PeakID (cmd=annotatePeaks.pl diffpeaks_349_vs_339.txt hg38 -raw) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type chr1-2 chr1 633928 634138 + 370.3 0.000 Intergenic Intergenic -1348 NR_162149 113219467 NR_162149 MIR12136 - microRNA 12136 ncRNA chr4-1 chr4 781906 782116 + 257.9 0.000 promoter-TSS (NR_036511) promoter-TSS (NR_036511) -163 NR_036511 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr14-1 chr14 103715482 103715692 + 253.6 0.000 promoter-TSS (NM_001100118) promoter-TSS (NM_001100118) -136 NM_005432 7517 Hs.592325 NM_005432 ENSG00000126215 XRCC3 CMM6 X-ray repair cross complementing 3 protein-coding chr21-1 chr21 8234398 8234608 + 229.8 0.000 intron (NR_003287, intron 1 of 2) (TCTC)n|Simple_repeat|Simple_repeat -15002 NR_128716 103504739 NR_128716 ENSG00000277379 MIR6724-3 hsa-mir-6724-3 microRNA 6724-3 ncRNA KI270467.1-1 KI270467.1 2114 2324 + 228.2 0.000 NA NA NA NA chr19-1 chr19 4471814 4472024 + 224.6 0.000 promoter-TSS (NM_032631) promoter-TSS (NM_032631) -378 NM_001001520 84717 Hs.43071 NM_032631 ENSG00000167674 HDGFL2 HDGF-2|HDGF2|HDGFRP2|HRP-2|HRP2 HDGF like 2 protein-coding chr9-2 chr9 136363193 136363403 + 223.4 0.000 TTS (NM_052813) TTS (NM_052813) 446 NR_073565 728489 Hs.528581 NM_001080849 ENSG00000213221 DNLZ C9orf151|HEP|HEP1|TIMM15|ZIM17|bA413M3.2 DNL-type zinc finger protein-coding chr16-2 chr16 1782691 1782901 + 216.2 0.000 promoter-TSS (NM_001284501) promoter-TSS (NM_001284501) -164 NM_012225 10101 Hs.256549 NM_012225 ENSG00000095906 NUBP2 CFD1|CIAO6|NBP 2|NUBP1 nucleotide binding protein 2 protein-coding chr16-1 chr16 5098043 5098253 + 212.2 0.000 promoter-TSS (NM_001289029) promoter-TSS (NM_001289029) -328 NM_001289029 196483 Hs.406461 NM_201400 ENSG00000118894 EEF2KMT EFM3|FAM86A|SB153|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding chr11-9 chr11 65615405 65615615 + 210.2 0.000 promoter-TSS (NM_032223) promoter-TSS (NM_032223) -802 NM_032223 399909 Hs.380801 NM_032223 ENSG00000197136 PCNX3 PCNXL3 pecanex 3 protein-coding chr17-4 chr17 81239075 81239285 + 200.5 0.000 promoter-TSS (NM_001363764) promoter-TSS (NM_001363764) -125 NM_001363764 146705 Hs.631761 NM_144679 ENSG00000167302 TEPSIN C17orf56|ENTHD2 TEPSIN adaptor related protein complex 4 accessory protein protein-coding chr3-1 chr3 50235927 50236137 + 194.3 0.000 promoter-TSS (NM_002070) promoter-TSS (NM_002070) -172 NM_001282618 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding KI270467.1-2 KI270467.1 3150 3360 + 191.1 0.000 NA NA NA NA chr17-3 chr17 82023032 82023242 + 185.3 0.000 promoter-TSS (NM_144998) promoter-TSS (NM_144998) -168 NM_144999 201255 Hs.143774 NM_144999 ENSG00000169683 LRRC45 - leucine rich repeat containing 45 protein-coding chr7-2 chr7 100586389 100586599 + 185.2 0.000 promoter-TSS (NM_002319) promoter-TSS (NM_002319) 166 NM_033506 26261 Hs.283764 NM_012172 ENSG00000106336 FBXO24 FBX24 F-box protein 24 protein-coding KI270438.1-2 KI270438.1 104022 104232 + 172.6 0.000 NA NA NA NA chr19-2 chr19 1490862 1491072 + 172.4 0.000 promoter-TSS (NM_138393) promoter-TSS (NM_138393) -214 NM_138393 92840 Hs.76277 NM_138393 ENSG00000115255 REEP6 C19orf32|DP1L1|REEP6.1|REEP6.2|RP77|TB2L1|Yip2f receptor accessory protein 6 protein-coding chr9-1 chr9 134025121 134025331 + 171.6 0.000 promoter-TSS (NR_149319) promoter-TSS (NR_149319) -250 NR_149319 266655 Hs.654869 NM_001355256 ENSG00000235106 BRD3OS LINC00094|LP2477|NCRNA00094 BRD3 opposite strand protein-coding chr1-1 chr1 9910411 9910621 + 168.5 0.000 promoter-TSS (NM_001012329) promoter-TSS (NM_001012329) -247 NM_020248 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr14-2 chr14 105491014 105491224 + 168.1 0.000 promoter-TSS (NM_001134875) promoter-TSS (NM_001134875) -127 NM_001367178 283643 Hs.720306 NM_173608 ENSG00000185347 TEDC1 C14orf80 tubulin epsilon and delta complex 1 protein-coding chr15-1 chr15 75451932 75452142 + 168.0 0.000 promoter-TSS (NM_001145358) promoter-TSS (NM_001145358) -347 NM_015477 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding chr17-2 chr17 2396897 2397107 + 167.1 0.000 intron (NM_020310, intron 1 of 5) intron (NM_020310, intron 1 of 5) 4058 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr19-8 chr19 5904511 5904721 + 166.8 0.000 promoter-TSS (NM_001017921) promoter-TSS (NM_001017921) -256 NM_001017921 400673 Hs.620821 NM_001017921 ENSG00000187650 VMAC - vimentin type intermediate filament associated coiled-coil protein protein-coding chr19-3 chr19 19063695 19063905 + 166.1 0.000 promoter-TSS (NM_001321544) promoter-TSS (NM_001321544) -194 NM_178526 284439 Hs.303669 NM_178526 ENSG00000181035 SLC25A42 MECREN solute carrier family 25 member 42 protein-coding chr14-3 chr14 104752783 104752993 + 164.5 0.000 promoter-TSS (NM_006427) promoter-TSS (NM_006427) -259 NM_021709 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr8-1 chr8 25458486 25458696 + 160.1 0.000 promoter-TSS (NM_001317907) promoter-TSS (NM_001317907) -158 NM_017634 54793 Hs.72071 NM_017634 ENSG00000104756 KCTD9 BTBD27 potassium channel tetramerization domain containing 9 protein-coding chr13-1 chr13 110715568 110715778 + 158.5 0.000 exon (NM_005537, exon 1 of 2) intron (NM_001267728, intron 1 of 1) 236 NM_001267728 3621 Hs.46700 NM_005537 ENSG00000153487 ING1 p24ING1c|p33|p33ING1|p33ING1b|p47|p47ING1a inhibitor of growth family member 1 protein-coding chr5-2 chr5 138469607 138469817 + 158.2 0.000 TTS (NM_001964) TTS (NM_001964) 4233 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr4-2 chr4 2262191 2262401 + 157.8 0.000 promoter-TSS (NM_006454) promoter-TSS (NM_006454) -187 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr5-1 chr5 138331899 138332109 + 157.5 0.000 promoter-TSS (NR_146628) promoter-TSS (NR_146628) -101 NR_146628 100128966 Hs.666832 NR_146628 ENSG00000120709 LOC100128966 - uncharacterized LOC100128966 ncRNA chr11-16 chr11 64185960 64186170 + 157.3 0.000 promoter-TSS (NM_006819) promoter-TSS (NM_006819) -106 NM_006819 10963 Hs.337295 NM_006819 ENSG00000168439 STIP1 HEL-S-94n|HOP|IEF-SSP-3521|P60|STI1|STI1L stress induced phosphoprotein 1 protein-coding chr11-20 chr11 74170956 74171166 + 157.0 0.000 promoter-TSS (NM_016147) promoter-TSS (NM_016147) -42 NM_001286577 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 domain containing 3 centriole elongation regulator protein-coding chr11-11 chr11 64778667 64778877 + 156.2 0.000 promoter-TSS (NM_001346409) promoter-TSS (NM_001346409) 72 NM_201995 7536 Hs.502829 NM_004630 ENSG00000168066 SF1 BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162 splicing factor 1 protein-coding chr16-3 chr16 85321893 85322103 + 154.4 0.000 Intergenic MIRc|SINE|MIR -15673 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr19-14 chr19 4342753 4342963 + 154.4 0.000 promoter-TSS (NM_032868) promoter-TSS (NM_032868) -669 NM_032868 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding chr14-4 chr14 74084488 74084698 + 151.8 0.000 promoter-TSS (NM_001278594) promoter-TSS (NM_001278594) -140 NM_001278593 4329 Hs.293970 NM_005589 ENSG00000119711 ALDH6A1 MMSADHA|MMSDH aldehyde dehydrogenase 6 family member A1 protein-coding chr11-13 chr11 2400506 2400716 + 151.5 0.000 promoter-TSS (NM_005706) promoter-TSS (NM_005706) -139 NM_005706 10078 Hs.523424 NM_005706 ENSG00000184281 TSSC4 - tumor suppressing subtransferable candidate 4 protein-coding chr17-6 chr17 59155458 59155668 + 150.9 0.000 promoter-TSS (NM_018304) promoter-TSS (NM_018304) -183 NM_018304 55771 Hs.631750 NM_018304 ENSG00000068489 PRR11 - proline rich 11 protein-coding chr2-2 chr2 26785797 26786007 + 150.5 0.000 promoter-TSS (NM_001809) promoter-TSS (NM_001809) -113 NM_001042426 1058 Hs.1594 NM_001809 ENSG00000115163 CENPA CENP-A|CenH3 centromere protein A protein-coding chr11-7 chr11 65382416 65382626 + 149.4 0.000 promoter-TSS (NM_001352384) promoter-TSS (NM_001352384) 125 NM_001352383 283130 Hs.661604 NM_182556 ENSG00000162241 SLC25A45 - solute carrier family 25 member 45 protein-coding chr17-5 chr17 47649504 47649714 + 148.9 0.000 promoter-TSS (NM_002265) promoter-TSS (NM_002265) -310 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr1-8 chr1 19260747 19260957 + 147.5 0.000 TTS (NM_016183) TTS (NM_016183) 9047 NM_016183 51154 Hs.463797 NM_016183 ENSG00000053372 MRTO4 C1orf33|MRT4|dJ657E11.4 MRT4 homolog, ribosome maturation factor protein-coding chr19-5 chr19 49766530 49766740 + 146.3 0.000 promoter-TSS (NM_014203) promoter-TSS (NM_014203) -366 NM_130787 160 Hs.467125 NM_014203 ENSG00000196961 AP2A1 ADTAA|AP2-ALPHA|CLAPA1 adaptor related protein complex 2 subunit alpha 1 protein-coding chr19-7 chr19 16111568 16111778 + 145.8 0.000 promoter-TSS (NM_005370) promoter-TSS (NM_005370) -216 NM_005370 4218 Hs.642874 NM_005370 ENSG00000167461 RAB8A MEL|RAB8 RAB8A, member RAS oncogene family protein-coding KI270733.1-1 KI270733.1 135020 135230 + 145.8 0.000 NA NA NA NA chr19-4 chr19 4968741 4968951 + 143.4 0.000 promoter-TSS (NM_015015) promoter-TSS (NM_015015) -267 NM_001370093 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr7-1 chr7 1459601 1459811 + 142.6 0.000 promoter-TSS (NM_182924) promoter-TSS (NM_182924) -236 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr11-15 chr11 695102 695312 + 140.9 0.000 promoter-TSS (NM_174940) promoter-TSS (NM_174940) -384 NM_001042463 283232 Hs.448664 NM_174940 ENSG00000177042 TMEM80 - transmembrane protein 80 protein-coding chr4-3 chr4 1309407 1309617 + 139.4 0.000 promoter-TSS (NM_001297433) promoter-TSS (NM_001297433) 69 NM_001297432 10296 Hs.139896 NM_005882 ENSG00000090316 MAEA EMLP|EMP|GID9|HLC-10|P44EMLP|PIG5 macrophage erythroblast attacher protein-coding chr19-24 chr19 2186222 2186432 + 139.0 0.000 intron (NM_032482, intron 3 of 27) intron (NM_032482, intron 3 of 27) 22394 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr8-2 chr8 102239110 102239320 + 139.0 0.000 promoter-TSS (NM_001172478) promoter-TSS (NM_001172478) -97 NM_015713 50484 Hs.512592 NM_015713 ENSG00000048392 RRM2B MTDPS8A|MTDPS8B|P53R2 ribonucleotide reductase regulatory TP53 inducible subunit M2B protein-coding chr9-3 chr9 129080851 129081061 + 138.7 0.000 promoter-TSS (NM_020438) promoter-TSS (NM_020438) -155 NM_001135917 57171 Hs.21701 NM_020438 ENSG00000167130 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding chr4-4 chr4 39182207 39182417 + 138.1 0.000 promoter-TSS (NM_001317924) promoter-TSS (NM_001317924) -217 NM_025132 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr19-9 chr19 55339452 55339662 + 138.0 0.000 promoter-TSS (NM_032701) promoter-TSS (NM_032701) -319 NM_032701 84787 Hs.590982 NM_032701 ENSG00000133247 KMT5C SUV420H2|Suv4-20h2 lysine methyltransferase 5C protein-coding chr1-6 chr1 244652783 244652993 + 137.6 0.000 promoter-TSS (NR_123735) promoter-TSS (NR_123735) -160 NR_123735 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr11-18 chr11 65507379 65507589 + 137.0 0.000 promoter-TSS (NR_145459) promoter-TSS (NR_145459) -52 NR_145459 109136579 Hs.621695 NR_145459 TALAM1 - MALAT1 antisense transcript ncRNA chr19-19 chr19 42268828 42269038 + 136.8 0.000 intron (NM_001304815, intron 1 of 20) CpG 396 NM_001304815 23152 Hs.388236 NM_015125 ENSG00000079432 CIC MRD45 capicua transcriptional repressor protein-coding chr19-29 chr19 18919440 18919650 + 136.4 0.000 promoter-TSS (NM_199444) promoter-TSS (NM_199444) -158 NM_199444 11316 Hs.10326 NM_007263 ENSG00000105669 COPE epsilon-COP coatomer protein complex subunit epsilon protein-coding chr22-3 chr22 36776302 36776512 + 136.4 0.000 promoter-TSS (NR_033531) promoter-TSS (NR_033531) -288 NR_033531 11020 Hs.415172 NM_006860 ENSG00000100360 IFT27 BBS19|RABL4|RAYL intraflagellar transport 27 protein-coding chr19-17 chr19 1812529 1812739 + 136.2 0.000 promoter-TSS (NM_138813) promoter-TSS (NM_138813) -358 NR_047593 148229 Hs.306212 NM_138813 ENSG00000130270 ATP8B3 ATPIK ATPase phospholipid transporting 8B3 protein-coding chr9-5 chr9 136849334 136849544 + 136.2 0.000 exon (NM_001135861, exon 1 of 4) exon (NM_001135861, exon 1 of 4) 623 NM_001287343 29085 Hs.409834 NM_014172 ENSG00000054148 PHPT1 CGI-202|HEL-S-132P|HSPC141|PHP|PHP14 phosphohistidine phosphatase 1 protein-coding chr17-8 chr17 81222999 81223209 + 135.3 0.000 promoter-TSS (NM_014984) promoter-TSS (NM_014984) -139 NM_014984 22994 Hs.514578 NM_014984 ENSG00000141577 CEP131 AZ1|AZI1|ZA1 centrosomal protein 131 protein-coding chr19-26 chr19 18522176 18522386 + 135.0 0.000 promoter-TSS (NM_006532) promoter-TSS (NM_006532) -211 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr1-3 chr1 151282009 151282219 + 134.8 0.000 promoter-TSS (NM_001304763) promoter-TSS (NM_001304763) -185 NR_135595 100507670 Hs.225083 NR_135595 ENSG00000232671 ZNF687-AS1 - ZNF687 antisense RNA 1 ncRNA chr17-11 chr17 63622068 63622278 + 134.4 0.000 promoter-TSS (NM_001363768) promoter-TSS (NM_001363768) -244 NM_002401 4215 Hs.29282 NM_002401 ENSG00000198909 MAP3K3 MAPKKK3|MEKK3 mitogen-activated protein kinase kinase kinase 3 protein-coding chr9-6 chr9 124297511 124297721 + 134.1 0.000 intron (NM_001166171, intron 2 of 10) intron (NM_001166171, intron 2 of 10) 5196 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr1-5 chr1 2246459 2246669 + 133.1 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 18245 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr16-13 chr16 67806560 67806770 + 132.7 0.000 promoter-TSS (NM_001320239) promoter-TSS (NM_001320239) -105 NM_001320238 57610 Hs.368569 NM_020850 ENSG00000141084 RANBP10 - RAN binding protein 10 protein-coding chr7-17 chr7 134646595 134646805 + 131.4 0.000 promoter-TSS (NM_199186) promoter-TSS (NM_199186) -79 NM_199186 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr9-7 chr9 134164851 134165061 + 131.1 0.000 promoter-TSS (NR_023344) promoter-TSS (NR_023344) -392 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr15-3 chr15 42575288 42575498 + 131.0 0.000 promoter-TSS (NM_020759) promoter-TSS (NM_020759) -213 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr17-9 chr17 7615025 7615235 + 129.6 0.000 promoter-TSS (NM_004860) promoter-TSS (NM_004860) -233 NM_004860 9513 Hs.52788 NM_004860 ENSG00000129245 FXR2 FMR1L2|FXR2P FMR1 autosomal homolog 2 protein-coding chr19-20 chr19 6424987 6425197 + 129.4 0.000 promoter-TSS (NM_001366299) promoter-TSS (NM_001366299) -281 NM_001366299 8570 Hs.727344 NM_003685 ENSG00000088247 KHSRP FBP2|FUBP2|KSRP|p75 KH-type splicing regulatory protein protein-coding chr11-14 chr11 1389595 1389805 + 129.1 0.000 promoter-TSS (NM_001256629) promoter-TSS (NM_001256629) -234 NR_046331 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr12-8 chr12 56646002 56646212 + 128.8 0.000 promoter-TSS (NM_001686) promoter-TSS (NM_001686) -123 NM_001686 506 Hs.406510 NM_001686 ENSG00000110955 ATP5F1B ATP5B|ATPMB|ATPSB|HEL-S-271 ATP synthase F1 subunit beta protein-coding chr13-4 chr13 97433071 97433281 + 127.8 0.000 promoter-TSS (NM_021033) promoter-TSS (NM_021033) -993 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr19-12 chr19 41884165 41884375 + 127.7 0.000 promoter-TSS (NM_199002) promoter-TSS (NM_199002) -173 NM_199002 9138 Hs.631550 NM_004706 ENSG00000076928 ARHGEF1 GEF1|IMD62|LBCL2|LSC|P115-RHOGEF|SUB1.5 Rho guanine nucleotide exchange factor 1 protein-coding chr4-11 chr4 10093924 10094134 + 127.4 0.000 intron (NM_005112, intron 2 of 11) intron (NM_005112, intron 2 of 11) -15337 NR_036090 100423011 NR_036090 ENSG00000264931 MIR3138 mir-3138 microRNA 3138 ncRNA chr11-26 chr11 68460389 68460599 + 127.3 0.000 promoter-TSS (NM_001352360) promoter-TSS (NM_001352360) -258 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr3-2 chr3 125915960 125916170 + 126.4 0.000 promoter-TSS (NR_024250) promoter-TSS (NR_024250) -536 NR_024251 100125556 Hs.553949 NR_024250 ENSG00000171084 FAM86JP - family with sequence similarity 86, member A pseudogene pseudo chr16-5 chr16 88663074 88663284 + 126.3 0.000 promoter-TSS (NM_002461) promoter-TSS (NM_002461) -88 NM_002461 4597 Hs.252457 NM_002461 ENSG00000167508 MVD FP17780|MDDase|MPD|POROK7 mevalonate diphosphate decarboxylase protein-coding chr19-11 chr19 3572630 3572840 + 126.3 0.000 promoter-TSS (NM_006339) promoter-TSS (NM_006339) -209 NM_006339 10362 Hs.406534 NM_006339 ENSG00000064961 HMG20B BRAF25|BRAF35|HMGX2|HMGXB2|PP7706|SMARCE1r|SOXL|pp8857 high mobility group 20B protein-coding chr17-15 chr17 4967289 4967499 + 126.3 0.000 TTS (NM_015099) TTS (NM_015099) 423 NM_004890 9552 Hs.90436 NM_004890 ENSG00000091640 SPAG7 ACRP|FSA-1 sperm associated antigen 7 protein-coding chr7-4 chr7 2249074 2249284 + 126.2 0.000 promoter-TSS (NR_160264) promoter-TSS (NR_160264) -132 NR_160264 4521 Hs.534331 NM_002452 ENSG00000106268 NUDT1 MTH1 nudix hydrolase 1 protein-coding chr14-5 chr14 52552593 52552803 + 126.0 0.000 promoter-TSS (NM_001099652) promoter-TSS (NM_001099652) -115 NM_001160047 57544 Hs.532609 NM_020784 ENSG00000087301 TXNDC16 ERp90|KIAA1344 thioredoxin domain containing 16 protein-coding chr11-21 chr11 3422887 3423097 + 126.0 0.000 Intergenic CpG -31077 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr16-10 chr16 30370705 30370915 + 125.5 0.000 promoter-TSS (NM_015527) promoter-TSS (NM_015527) -124 NM_001324459 29895 Hs.50889 NM_013292 ENSG00000180209 MYLPF HUMMLC2B|MLC2B|MRLC2|MYL11 myosin light chain, phosphorylatable, fast skeletal muscle protein-coding ML143380.1-1 ML143380.1 79732 79942 + 125.3 0.000 NA NA NA NA chr19-23 chr19 48469073 48469283 + 124.1 0.000 promoter-TSS (NM_004228) promoter-TSS (NM_004228) -30 NM_017457 9266 Hs.144011 NM_004228 ENSG00000105443 CYTH2 ARNO|CTS18|CTS18.1|PSCD2|PSCD2L|SEC7L|Sec7p-L|Sec7p-like|cytohesin-2 cytohesin 2 protein-coding chr2-4 chr2 175168312 175168522 + 124.1 0.000 promoter-TSS (NR_030630) promoter-TSS (NR_030630) -211 NM_001256091 1386 Hs.592510 NM_001880 ENSG00000115966 ATF2 CRE-BP1|CREB-2|CREB2|HB16|TREB7 activating transcription factor 2 protein-coding chr19-36 chr19 3968751 3968961 + 123.5 0.000 intron (NM_001348, intron 2 of 8) intron (NM_001348, intron 2 of 8) 2243 NM_001348 1613 Hs.631844 NM_001348 ENSG00000167657 DAPK3 DLK|ZIP|ZIPK death associated protein kinase 3 protein-coding chr16-4 chr16 19555418 19555628 + 123.3 0.000 promoter-TSS (NR_158161) promoter-TSS (NR_158161) -180 NM_001300743 57020 Hs.654964 NM_020314 ENSG00000103544 VPS35L C16orf62 VPS35 endosomal protein sorting factor like protein-coding chr19-10 chr19 19776470 19776680 + 123.1 0.000 promoter-TSS (NR_026956) promoter-TSS (NR_026956) 1 NM_001355194 7608 NM_001355194 ZNF56 ZNF742 zinc finger protein 56 protein-coding chr14-6 chr14 77616783 77616993 + 122.9 0.000 promoter-TSS (NM_004863) promoter-TSS (NM_004863) -121 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr16-6 chr16 85688949 85689159 + 122.9 0.000 promoter-TSS (NM_016095) promoter-TSS (NM_016095) -100 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr16-9 chr16 78099382 78099592 + 122.7 0.000 promoter-TSS (NM_016373) promoter-TSS (NM_016373) -167 NR_120436 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr1-13 chr1 156767237 156767447 + 122.5 0.000 promoter-TSS (NM_005973) promoter-TSS (NM_005973) -193 NM_005973 5546 Hs.516948 NM_005973 ENSG00000143294 PRCC RCCP1|TPRC proline rich mitotic checkpoint control factor protein-coding chr14-8 chr14 95534773 95534983 + 122.2 0.000 promoter-TSS (NR_001459) promoter-TSS (NR_001459) -6 NR_001459 283596 Hs.448753 NR_001459 SNHG10 C14orf62|LINC00063|NCRNA00063 small nucleolar RNA host gene 10 ncRNA chr10-6 chr10 102245301 102245511 + 121.7 0.000 promoter-TSS (NM_004193) promoter-TSS (NM_004193) -126 NM_004193 8729 Hs.290243 NM_004193 ENSG00000107862 GBF1 ARF1GEF golgi brefeldin A resistant guanine nucleotide exchange factor 1 protein-coding chr16-8 chr16 81096409 81096619 + 121.7 0.000 promoter-TSS (NR_033249) promoter-TSS (NR_033249) -119 NR_033249 2653 Hs.546256 NM_004483 ENSG00000140905 GCSH GCE|NKH glycine cleavage system protein H protein-coding chr16-7 chr16 89490659 89490869 + 121.6 0.000 promoter-TSS (NM_013275) promoter-TSS (NM_013275) -203 NM_001256183 29123 Hs.335003 NM_013275 ENSG00000167522 ANKRD11 ANCO-1|ANCO1|LZ16|T13 ankyrin repeat domain 11 protein-coding chr17-7 chr17 82458496 82458706 + 121.2 0.000 promoter-TSS (NM_001083608) promoter-TSS (NM_001083608) -63 NM_031968 26502 Hs.256526 NM_012336 ENSG00000141562 NARF IOP2 nuclear prelamin A recognition factor protein-coding chr19-28 chr19 42075913 42076123 + 121.1 0.000 promoter-TSS (NM_022752) promoter-TSS (NM_022752) -148 NM_022752 64763 Hs.13323 NM_022752 ENSG00000105732 ZNF574 FP972 zinc finger protein 574 protein-coding chr7-6 chr7 100538946 100539156 + 121.1 0.000 promoter-TSS (NM_006076) promoter-TSS (NM_006076) -152 NM_006076 3268 Hs.521083 NM_006076 ENSG00000106351 AGFG2 HRBL|RABR ArfGAP with FG repeats 2 protein-coding chr17-10 chr17 28951610 28951820 + 120.9 0.000 promoter-TSS (NM_020889) promoter-TSS (NM_020889) -197 NM_001290131 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr11-24 chr11 66546027 66546237 + 120.8 0.000 promoter-TSS (NM_207340) promoter-TSS (NM_207340) -84 NM_207340 254359 Hs.209587 NM_207340 ENSG00000174165 ZDHHC24 - zinc finger DHHC-type containing 24 protein-coding chr9-11 chr9 127396846 127397056 + 120.5 0.000 promoter-TSS (NM_001271712) promoter-TSS (NM_001271712) -187 NM_001271711 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr9-8 chr9 137200786 137200996 + 120.1 0.000 promoter-TSS (NM_001128228) promoter-TSS (NM_001128228) -150 NM_001128228 286262 Hs.323445 NM_173691 ENSG00000176058 TPRN C9orf75|DFNB79 taperin protein-coding chr10-1 chr10 132537529 132537739 + 120.1 0.000 promoter-TSS (NR_158224) promoter-TSS (NR_158224) -153 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr1-11 chr1 2199328 2199538 + 120.0 0.000 5' UTR (NM_001282670, exon 4 of 8) 5' UTR (NM_001282670, exon 4 of 8) -4658 NR_046427 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr16-16 chr16 72093654 72093864 + 119.4 0.000 promoter-TSS (NM_001324354) promoter-TSS (NM_001324354) -88 NM_014003 9785 Hs.151218 NM_014003 ENSG00000140829 DHX38 DDX38|PRP16|PRPF16|RP84 DEAH-box helicase 38 protein-coding chr7-5 chr7 1537285 1537495 + 119.0 0.000 intron (NM_002360, intron 1 of 2) intron (NM_002360, intron 1 of 2) -2510 NR_149036 100128653 Hs.656985 NR_149036 LOC100128653 - uncharacterized LOC100128653 ncRNA chr11-27 chr11 67805614 67805824 + 118.7 0.000 promoter-TSS (NR_024249) promoter-TSS (NR_024249) -383 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr19-27 chr19 10717714 10717924 + 118.5 0.000 promoter-TSS (NM_004945) promoter-TSS (NM_004945) -234 NM_001005362 1785 Hs.211463 NM_004945 ENSG00000079805 DNM2 CMT2M|CMTDI1|CMTDIB|DI-CMTB|DYN2|DYNII|LCCS5 dynamin 2 protein-coding chr11-17 chr11 66958442 66958652 + 117.9 0.000 promoter-TSS (NM_000920) promoter-TSS (NM_000920) -164 NM_001040716 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding chr12-2 chr12 17282269 17282479 + 117.4 0.000 Intergenic L1PB1|LINE|L1 293627 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo chr7-12 chr7 77798522 77798732 + 117.4 0.000 promoter-TSS (NM_032936) promoter-TSS (NM_032936) -146 NM_001127358 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding KI270733.1-2 KI270733.1 135606 135816 + 117.2 0.000 NA NA NA NA chr5-5 chr5 151771525 151771735 + 116.9 0.000 promoter-TSS (NM_005754) promoter-TSS (NM_005754) -122 NR_132346 100652758 Hs.587054 NM_001278082 LOC100652758 - uncharacterized LOC100652758 ncRNA chr12-5 chr12 55973834 55974044 + 115.5 0.000 promoter-TSS (NM_001252037) promoter-TSS (NM_001252037) 26 NM_001252036 5869 Hs.157659 NM_002868 ENSG00000111540 RAB5B - RAB5B, member RAS oncogene family protein-coding chr7-9 chr7 102748719 102748929 + 115.5 0.000 promoter-TSS (NM_001145268) promoter-TSS (NM_001145268) -128 NR_026879 222234 Hs.202543 NM_147194 ENSG00000222011 FAM185A - family with sequence similarity 185 member A protein-coding chr10-4 chr10 123154170 123154380 + 115.5 0.000 promoter-TSS (NM_001007793) promoter-TSS (NM_001007793) 31 NM_001007793 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr10-3 chr10 598547 598757 + 113.7 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -29912 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr17-13 chr17 17972546 17972756 + 113.5 0.000 promoter-TSS (NM_001288789) promoter-TSS (NM_001288789) -162 NM_001130090 83450 Hs.579264 NM_031294 ENSG00000171962 DRC3 CFAP134|LRRC48 dynein regulatory complex subunit 3 protein-coding chr2-3 chr2 3518927 3519137 + 113.4 0.000 intron (NM_018269, intron 1 of 3) CpG 499 NM_018269 55256 Hs.502773 NM_018269 ENSG00000182551 ADI1 APL1|ARD|Fe-ARD|HMFT1638|MTCBP1|Ni-ARD|SIPL|mtnD acireductone dioxygenase 1 protein-coding chr1-7 chr1 184754914 184755124 + 112.4 0.000 promoter-TSS (NM_001319960) promoter-TSS (NM_001319960) -161 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr22-7 chr22 38705510 38705720 + 112.3 0.000 promoter-TSS (NM_004286) promoter-TSS (NM_004286) -329 NM_004286 9567 Hs.276925 NM_004286 ENSG00000100226 GTPBP1 GP-1|GP1|HSPC018 GTP binding protein 1 protein-coding chr19-13 chr19 1039839 1040049 + 112.3 0.000 promoter-TSS (NM_019112) promoter-TSS (NM_019112) -159 NM_019112 10347 Hs.134514 NM_019112 ENSG00000064687 ABCA7 ABCA-SSN|ABCX|AD9 ATP binding cassette subfamily A member 7 protein-coding chr11-25 chr11 13668365 13668575 + 111.7 0.000 promoter-TSS (NM_032228) promoter-TSS (NM_032228) -198 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding chr19-33 chr19 52189689 52189899 + 111.5 0.000 promoter-TSS (NR_033500) promoter-TSS (NR_033500) -258 NR_033500 5518 Hs.467192 NM_014225 ENSG00000105568 PPP2R1A MRD36|PP2A-Aalpha|PP2AA|PP2AAALPHA|PR65A protein phosphatase 2 scaffold subunit Aalpha protein-coding chr19-25 chr19 5680503 5680713 + 110.9 0.000 promoter-TSS (NM_001365761) promoter-TSS (NM_001365761) 288 NM_001308240 125988 Hs.356626 NM_205767 ENSG00000174917 MICOS13 C19orf70|MIC13|P117|QIL1 mitochondrial contact site and cristae organizing system subunit 13 protein-coding chr8-3 chr8 28890075 28890285 + 110.5 0.000 promoter-TSS (NM_001324393) promoter-TSS (NM_001324393) 1 NR_026826 55756 Hs.162397 NM_018250 ENSG00000104299 INTS9 CPSF2L|INT9|RC74 integrator complex subunit 9 protein-coding chr2-15 chr2 197453283 197453493 + 110.3 0.000 promoter-TSS (NM_025147) promoter-TSS (NM_025147) -35 NM_025147 80219 Hs.606592 NM_025147 ENSG00000115520 COQ10B - coenzyme Q10B protein-coding chr4-8 chr4 1289650 1289860 + 109.7 0.000 promoter-TSS (NM_001017405) promoter-TSS (NM_001017405) -136 NM_001017405 10296 Hs.139896 NM_005882 ENSG00000090316 MAEA EMLP|EMP|GID9|HLC-10|P44EMLP|PIG5 macrophage erythroblast attacher protein-coding chr3-6 chr3 127075005 127075215 + 109.6 0.000 Intergenic Intergenic 86516 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr16-12 chr16 2155508 2155718 + 109.3 0.000 promoter-TSS (NR_132114) promoter-TSS (NR_132114) -169 NM_032271 84231 Hs.713632 NM_032271 ENSG00000131653 TRAF7 CAFDADD|RFWD1|RNF119 TNF receptor associated factor 7 protein-coding chr7-3 chr7 1044309 1044519 + 109.1 0.000 promoter-TSS (NM_001303473) promoter-TSS (NM_001303473) -132 NM_001303473 115330 Hs.585007 NM_138445 ENSG00000164849 GPR146 PGR8 G protein-coupled receptor 146 protein-coding chr19-39 chr19 14529372 14529582 + 108.9 0.000 promoter-TSS (NR_030369) promoter-TSS (NR_030369) -66 NR_030369 693224 NR_030369 ENSG00000283822 MIR639 MIRN639|hsa-mir-639 microRNA 639 ncRNA chr10-2 chr10 101818519 101818729 + 108.9 0.000 promoter-TSS (NR_045118) promoter-TSS (NR_045118) -159 NM_001142434 10724 Hs.500842 NM_012215 ENSG00000198408 OGA MEA5|MGEA5|NCOAT O-GlcNAcase protein-coding chr19-40 chr19 8525714 8525924 + 108.6 0.000 intron (NM_012335, intron 24 of 27) intron (NM_012335, intron 24 of 27) -11652 NM_032370 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr14-11 chr14 91060835 91061045 + 108.2 0.000 promoter-TSS (NM_001322234) promoter-TSS (NM_001322234) -291 NM_182398 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr20-1 chr20 63682495 63682705 + 108.1 0.000 intron (NR_037882, intron 14 of 37) intron (NR_037882, intron 14 of 37) -14052 NM_003823 8771 Hs.434878 NM_003823 ENSG00000243509 TNFRSF6B DCR3|DJ583P15.1.1|M68|M68E|TR6 TNF receptor superfamily member 6b protein-coding chr19-30 chr19 20052156 20052366 + 107.9 0.000 Intergenic CpG -12756 NM_033196 91120 Hs.306298 NM_033196 ENSG00000197124 ZNF682 BC39498_3 zinc finger protein 682 protein-coding chr15-2 chr15 64163092 64163302 + 107.7 0.000 promoter-TSS (NM_000942) promoter-TSS (NM_000942) -42 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding chr1-43 chr1 150236058 150236268 + 107.5 0.000 promoter-TSS (NM_001280559) promoter-TSS (NM_001280559) -51 NM_030920 81611 Hs.656466 NM_030920 ENSG00000143401 ANP32E LANP-L|LANPL acidic nuclear phosphoprotein 32 family member E protein-coding chr19-78 chr19 12736993 12737203 + 106.5 0.000 promoter-TSS (NM_004317) promoter-TSS (NM_004317) -399 NM_004317 439 Hs.465985 NM_004317 ENSG00000198356 GET3 ARSA-I|ARSA1|ASNA-I|ASNA1|TRC40 guided entry of tail-anchored proteins factor 3, ATPase protein-coding chr16-18 chr16 3003959 3004169 + 106.5 0.000 Intergenic CpG 5109 NR_110947 101929613 Hs.741644 NR_110947 LOC101929613 LA16c-380H5.3 uncharacterized LOC101929613 ncRNA chr19-41 chr19 45178468 45178678 + 106.4 0.000 promoter-TSS (NM_001270892) promoter-TSS (NM_001270892) -172 NM_212550 388552 Hs.103902 NM_212550 ENSG00000189114 BLOC1S3 BLOS3|HPS8|RP biogenesis of lysosomal organelles complex 1 subunit 3 protein-coding chr19-38 chr19 15419048 15419258 + 106.0 0.000 promoter-TSS (NR_111971) promoter-TSS (NR_111971) -165 NM_014371 26993 Hs.399800 NM_014371 ENSG00000011243 AKAP8L HA95|HAP95|NAKAP|NAKAP95 A-kinase anchoring protein 8 like protein-coding chr20-4 chr20 46689588 46689798 + 106.0 0.000 promoter-TSS (NM_033550) promoter-TSS (NM_033550) -249 NM_033550 112858 Hs.440263 NM_033550 ENSG00000172315 TP53RK BUD32|C20orf64|GAMOS4|Nori-2|Nori-2p|PRPK|dJ101A2 TP53 regulating kinase protein-coding chr17-12 chr17 78883785 78883995 + 105.6 0.000 intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 19311 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr11-42 chr11 43680509 43680719 + 105.3 0.000 promoter-TSS (NM_016142) promoter-TSS (NM_016142) -124 NM_016142 51144 Hs.132513 NM_016142 ENSG00000149084 HSD17B12 KAR|SDR12C1 hydroxysteroid 17-beta dehydrogenase 12 protein-coding chr2-1 chr2 239401168 239401378 + 105.3 0.000 promoter-TSS (NM_006037) promoter-TSS (NM_006037) -163 NR_135575 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr7-19 chr7 30504879 30505089 + 105.3 0.000 promoter-TSS (NM_001199817) promoter-TSS (NM_001199817) -143 NM_001199816 79017 Hs.530024 NM_024051 ENSG00000006625 GGCT C7orf24|CRF21|GCTG|GGC gamma-glutamylcyclotransferase protein-coding chr19-15 chr19 42397019 42397229 + 105.1 0.000 promoter-TSS (NR_126041) promoter-TSS (NR_126041) -4 NR_126041 101930071 Hs.567935 NR_126041 ENSG00000213904 LOC101930071 - uncharacterized LOC101930071 ncRNA chr17-20 chr17 81094942 81095152 + 104.9 0.000 intron (NM_001144888, intron 6 of 13) intron (NM_001144888, intron 6 of 13) 30326 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr19-18 chr19 10871059 10871269 + 104.9 0.000 promoter-TSS (NM_199141) promoter-TSS (NM_199141) -389 NM_001370088 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr19-45 chr19 45995186 45995396 + 104.8 0.000 promoter-TSS (NM_001267723) promoter-TSS (NM_001267723) -176 NM_001267723 729440 Hs.515479 NM_001080402 ENSG00000104983 CCDC61 - coiled-coil domain containing 61 protein-coding chr19-22 chr19 8390121 8390331 + 104.6 0.000 promoter-TSS (NR_049795) promoter-TSS (NR_049795) -134 NM_004218 9230 Hs.558403 NM_004218 ENSG00000185236 RAB11B H-YPT3|NDAGSCW RAB11B, member RAS oncogene family protein-coding chr2-11 chr2 24047378 24047588 + 104.6 0.000 promoter-TSS (NM_001142319) promoter-TSS (NM_001142319) -57 NM_001142319 80304 Hs.24624 NM_025203 ENSG00000163026 WDCP C2orf44|MMAP|PP384 WD repeat and coiled coil containing protein-coding chr16-15 chr16 56451385 56451595 + 104.2 0.000 promoter-TSS (NM_018233) promoter-TSS (NM_018233) -34 NM_001324359 55239 Hs.231883 NM_018233 ENSG00000087263 OGFOD1 TPA1 2-oxoglutarate and iron dependent oxygenase domain containing 1 protein-coding chr12-3 chr12 122500874 122501084 + 103.9 0.000 promoter-TSS (NM_017612) promoter-TSS (NM_017612) -47 NM_017612 55596 Hs.37706 NM_017612 ENSG00000033030 ZCCHC8 - zinc finger CCHC-type containing 8 protein-coding chr19-68 chr19 11374908 11375118 + 103.9 0.000 intron (NM_175871, intron 1 of 1) CpG 306 NM_175871 126074 Hs.631619 NM_175871 ENSG00000173928 SWSAP1 C19orf39|SWS1AP1|ZSWIM7AP1 SWIM-type zinc finger 7 associated protein 1 protein-coding chr9-4 chr9 136790925 136791135 + 103.6 0.000 promoter-TSS (NM_032928) promoter-TSS (NM_032928) -314 NM_032928 85014 Hs.356744 NM_032928 ENSG00000244187 TMEM141 - transmembrane protein 141 protein-coding chr4-9 chr4 2242103 2242313 + 103.2 0.000 promoter-TSS (NM_024511) promoter-TSS (NM_024511) -87 NM_024511 79441 Hs.665869 NM_024511 ENSG00000214367 HAUS3 C4orf15|IT1|dgt3 HAUS augmin like complex subunit 3 protein-coding chr19-42 chr19 47048597 47048807 + 103.1 0.000 promoter-TSS (NM_017854) promoter-TSS (NM_017854) -78 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chr1-15 chr1 20661487 20661697 + 103.0 0.000 promoter-TSS (NM_005216) promoter-TSS (NM_005216) -48 NM_005216 1650 Hs.523145 NM_005216 ENSG00000244038 DDOST AGER1|CDG1R|GATD6|OKSWcl45|OST|OST48|WBP1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit protein-coding chr17-22 chr17 59892915 59893125 + 103.0 0.000 promoter-TSS (NM_001272060) promoter-TSS (NM_001272060) -26 NM_001272042 6198 Hs.463642 NM_003161 ENSG00000108443 RPS6KB1 PS6K|S6K|S6K-beta-1|S6K1|STK14A|p70 S6KA|p70(S6K)-alpha|p70-S6K|p70-alpha ribosomal protein S6 kinase B1 protein-coding chr13-3 chr13 113837810 113838020 + 102.7 0.000 intron (NM_000820, intron 6 of 14) intron (NM_000820, intron 6 of 14) 22305 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr1-10 chr1 171781349 171781559 + 102.5 0.000 promoter-TSS (NM_015935) promoter-TSS (NM_015935) -206 NM_001007239 51603 Hs.494705 NM_014955 ENSG00000010165 EEF1AKNMT 5630401D24Rik|CGI-01|DFNB26|DFNB26M|KIAA0859|METTL13|feat eEF1A lysine and N-terminal methyltransferase protein-coding chr19-16 chr19 18636677 18636887 + 102.5 0.000 promoter-TSS (NM_001345984) promoter-TSS (NM_001345984) -246 NM_001345984 55295 Hs.250632 NM_018316 ENSG00000167487 KLHL26 - kelch like family member 26 protein-coding chr11-37 chr11 66638436 66638646 + 102.5 0.000 promoter-TSS (NM_001198844) promoter-TSS (NM_001198844) -76 NM_001198843 5936 Hs.523822 NM_002896 ENSG00000173933 RBM4 LARK|RBM4A|ZCCHC21|ZCRB3A RNA binding motif protein 4 protein-coding chr11-23 chr11 67239902 67240112 + 101.8 0.000 promoter-TSS (NM_001256405) promoter-TSS (NM_001256405) -7 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding KI270466.1-1 KI270466.1 922 1132 + 101.8 0.000 NA NA NA NA chr17-14 chr17 82698717 82698927 + 101.7 0.000 promoter-TSS (NM_006822) promoter-TSS (NM_006822) -124 NM_006822 10966 Hs.484068 NM_006822 ENSG00000141542 RAB40B RAR|SEC4L RAB40B, member RAS oncogene family protein-coding chr11-28 chr11 64810547 64810757 + 101.6 0.000 promoter-TSS (NM_130801) promoter-TSS (NM_130801) 64 NM_000244 4221 Hs.423348 NM_000244 ENSG00000133895 MEN1 MEAI|SCG2 menin 1 protein-coding chr8-5 chr8 66667256 66667466 + 101.2 0.000 promoter-TSS (NM_025054) promoter-TSS (NM_025054) -130 NM_025054 80124 Hs.632066 NM_025054 ENSG00000175073 VCPIP1 DUBA3|VCIP135 valosin containing protein interacting protein 1 protein-coding chr1-27 chr1 2231861 2232071 + 100.9 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 3647 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr12-1 chr12 50111888 50112098 + 100.9 0.000 promoter-TSS (NM_032901) promoter-TSS (NM_032901) -243 NM_001257133 84987 Hs.388645 NM_032901 ENSG00000178449 COX14 C12orf62|PCAG1 cytochrome c oxidase assembly factor COX14 protein-coding chr9-12 chr9 124343045 124343255 + 100.7 0.000 intron (NM_001166169, intron 8 of 9) intron (NM_001166169, intron 8 of 9) -10323 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr4-12 chr4 474096 474306 + 100.2 0.000 promoter-TSS (NR_002451) promoter-TSS (NR_002451) 8 NR_002451 79963 Hs.677493 NM_024903 ENSG00000251595 ABCA11P ABCA11|EST1133530 ATP binding cassette subfamily A member 11, pseudogene pseudo chr10-5 chr10 79445783 79445993 + 100.0 0.000 promoter-TSS (NM_153367) promoter-TSS (NM_153367) -264 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr5-10 chr5 177517030 177517240 + 99.6 0.000 promoter-TSS (NM_016222) promoter-TSS (NM_016222) -174 NM_001321830 51428 Hs.484288 NM_016222 ENSG00000183258 DDX41 ABS|MPLPF DEAD-box helicase 41 protein-coding chrX-1 chrX 16786204 16786414 + 99.6 0.000 promoter-TSS (NM_018360) promoter-TSS (NM_018360) -123 NM_001168683 55787 Hs.555961 NM_018360 ENSG00000086712 TXLNG CXorf15|ELRG|FIAT|LSR5|TXLNGX taxilin gamma protein-coding chr4-6 chr4 9152889 9153099 + 99.4 0.000 Intergenic CpG -20179 NM_001358418 100287045 NM_001358418 ENSG00000229924 FAM90A26 FAM90A26P family with sequence similarity 90 member A26 protein-coding chr4-15 chr4 165327375 165327585 + 99.3 0.000 promoter-TSS (NM_006745) promoter-TSS (NM_006745) -186 NM_001017369 6307 Hs.105269 NM_006745 ENSG00000052802 MSMO1 DESP4|ERG25|MCCPD|SC4MOL methylsterol monooxygenase 1 protein-coding chr2-7 chr2 234981334 234981544 + 99.2 0.000 promoter-TSS (NM_001371305) promoter-TSS (NM_001371305) 65 NM_001371305 chr15-9 chr15 97960374 97960584 + 99.1 0.000 promoter-TSS (NM_183376) promoter-TSS (NM_183376) -224 NM_183376 91947 Hs.6093 NM_183376 ENSG00000140450 ARRDC4 - arrestin domain containing 4 protein-coding chr16-20 chr16 89301591 89301801 + 99.1 0.000 intron (NR_045839, intron 5 of 9) intron (NR_045839, intron 5 of 9) 5568 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr7-13 chr7 149028531 149028741 + 98.9 0.000 promoter-TSS (NR_163906) promoter-TSS (NR_163906) -131 NR_163907 chr19-35 chr19 18204150 18204360 + 98.7 0.000 promoter-TSS (NM_002866) promoter-TSS (NM_002866) -213 NM_002866 5864 Hs.27744 NM_002866 ENSG00000105649 RAB3A - RAB3A, member RAS oncogene family protein-coding chr14-7 chr14 66507935 66508145 + 98.5 0.000 5' UTR (NM_020806, exon 1 of 23) 5' UTR (NM_020806, exon 1 of 23) 633 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr16-44 chr16 74985104 74985314 + 98.5 0.000 promoter-TSS (NM_030581) promoter-TSS (NM_030581) -63 NM_001324171 79726 Hs.280951 NM_030581 ENSG00000103091 WDR59 CDW12|FP977|p90-120 WD repeat domain 59 protein-coding chr16-36 chr16 53503352 53503562 + 98.4 0.000 promoter-TSS (NM_001012398) promoter-TSS (NM_001012398) -153 NM_001012398 64400 Hs.380897 NM_022476 ENSG00000166971 AKTIP FT1|FTS AKT interacting protein protein-coding chr7-11 chr7 36152960 36153170 + 98.4 0.000 promoter-TSS (NM_030636) promoter-TSS (NM_030636) -189 NM_030636 80820 Hs.487994 NM_030636 ENSG00000122547 EEPD1 HSPC107 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding chr7-15 chr7 4745118 4745328 + 98.4 0.000 intron (NM_001037165, intron 2 of 8) CpG -30400 NM_014855 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 subunit zeta 1 protein-coding chr19-37 chr19 7829818 7830028 + 98.2 0.000 promoter-TSS (NM_145245) promoter-TSS (NM_145245) -295 NM_001159944 115704 Hs.26870 NM_145245 ENSG00000142459 EVI5L - ecotropic viral integration site 5 like protein-coding chr1-26 chr1 54764613 54764823 + 97.8 0.000 promoter-TSS (NM_152268) promoter-TSS (NM_152268) -195 NM_152268 25973 Hs.380169 NM_152268 ENSG00000162396 PARS2 EIEE75|MT-PRORS|proRS prolyl-tRNA synthetase 2, mitochondrial protein-coding chr11-31 chr11 75814963 75815173 + 97.7 0.000 promoter-TSS (NR_144531) promoter-TSS (NR_144531) -142 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr3-3 chr3 48556946 48557156 + 97.2 0.000 promoter-TSS (NM_004567) promoter-TSS (NM_004567) -248 NM_004567 5210 Hs.476217 NM_004567 ENSG00000114268 PFKFB4 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 protein-coding chr5-4 chr5 176647197 176647407 + 97.1 0.000 promoter-TSS (NM_001366492) promoter-TSS (NM_001366492) -182 NM_001366491 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr1-4 chr1 2227727 2227937 + 97.1 0.000 promoter-TSS (NM_003036) promoter-TSS (NM_003036) -487 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr14-10 chr14 99481087 99481297 + 96.7 0.000 promoter-TSS (NM_001099402) promoter-TSS (NM_001099402) -217 NM_001099402 8812 Hs.510409 NM_003858 ENSG00000090061 CCNK CPR4|IDDHDF cyclin K protein-coding chr13-7 chr13 49444065 49444275 + 96.6 0.000 promoter-TSS (NR_135324) promoter-TSS (NR_135324) -104 NR_135324 107303344 NM_001320727 SETDB2-PHF11 - SETDB2-PHF11 readthrough protein-coding chr3-7 chr3 36993172 36993382 + 96.6 0.000 promoter-TSS (NM_000249) promoter-TSS (NM_000249) -73 NM_001258274 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding chr1-48 chr1 186375258 186375468 + 96.6 0.000 promoter-TSS (NM_017847) promoter-TSS (NM_017847) -110 NM_003292 7175 Hs.279640 NM_003292 ENSG00000047410 TPR - translocated promoter region, nuclear basket protein protein-coding chr1-9 chr1 26865179 26865389 + 96.2 0.000 TTS (NM_006142) TTS (NM_006142) 2135 NM_006142 2810 Hs.523718 NM_006142 ENSG00000175793 SFN YWHAS stratifin protein-coding chr19-47 chr19 12890899 12891109 + 96.2 0.000 promoter-TSS (NM_000159) promoter-TSS (NM_000159) -125 NR_102316 2639 Hs.532699 NM_000159 ENSG00000105607 GCDH ACAD5|GCD glutaryl-CoA dehydrogenase protein-coding chr15-4 chr15 40565006 40565216 + 96.2 0.000 promoter-TSS (NM_052849) promoter-TSS (NM_052849) -54 NM_001289132 90416 Hs.654661 NM_052849 ENSG00000128891 CCDC32 C15orf57 coiled-coil domain containing 32 protein-coding chr17-38 chr17 49414873 49415083 + 96.0 0.000 promoter-TSS (NM_001281715) promoter-TSS (NM_001281715) -73 NM_001281715 5245 Hs.514303 NM_002634 ENSG00000167085 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding chr3-8 chr3 41962246 41962456 + 96.0 0.000 promoter-TSS (NM_001322500) promoter-TSS (NM_001322500) -248 NR_136342 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr1-12 chr1 2189630 2189840 + 95.9 0.000 non-coding (NR_046427, exon 4 of 4) non-coding (NR_046427, exon 4 of 4) 5037 NM_182533 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr4-16 chr4 124444 124654 + 95.7 0.000 promoter-TSS (NM_001289930) promoter-TSS (NM_001289930) 48 NM_001039127 255403 Hs.636638 NM_001039127 ENSG00000250312 ZNF718 - zinc finger protein 718 protein-coding chr1-30 chr1 62436395 62436605 + 95.7 0.000 promoter-TSS (NM_003368) promoter-TSS (NM_003368) 196 NM_001017415 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr11-35 chr11 117199078 117199288 + 95.7 0.000 promoter-TSS (NM_003186) promoter-TSS (NM_003186) -111 NM_001001522 6876 Hs.410977 NM_003186 ENSG00000149591 TAGLN SM22|SM22-alpha|SMCC|TAGLN1|WS3-10 transgelin protein-coding chr1-22 chr1 16613362 16613572 + 95.7 0.000 5' UTR (NM_017940, exon 1 of 29) 5' UTR (NM_017940, exon 1 of 29) 138 NM_017940 55672 Hs.467587 NM_017940 ENSG00000219481 NBPF1 AB13|AB14|AB23|AD2|NBG|NBPF NBPF member 1 protein-coding chr19-31 chr19 36014267 36014477 + 95.6 0.000 promoter-TSS (NM_032878) promoter-TSS (NM_032878) -130 NM_001347907 101927572 Hs.676116 NM_001290056 LOC101927572 - uncharacterized LOC101927572 protein-coding chr12-7 chr12 57693888 57694098 + 95.6 0.000 promoter-TSS (NM_001261421) promoter-TSS (NM_001261421) 38 NM_001017958 10956 Hs.527861 NM_006812 ENSG00000135506 OS9 ERLEC2|OS-9 OS9 endoplasmic reticulum lectin protein-coding chr12-14 chr12 6470756 6470966 + 95.3 0.000 promoter-TSS (NM_016830) promoter-TSS (NM_016830) -184 NM_014231 6843 Hs.20021 NM_014231 ENSG00000139190 VAMP1 CMS25|SPAX1|SYB1|VAMP-1 vesicle associated membrane protein 1 protein-coding chr16-11 chr16 84504782 84504992 + 95.3 0.000 promoter-TSS (NM_020947) promoter-TSS (NM_020947) -228 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr12-13 chr12 53727467 53727677 + 95.1 0.000 promoter-TSS (NM_020898) promoter-TSS (NM_020898) -120 NR_026554 57658 Hs.156667 NM_020898 ENSG00000012822 CALCOCO1 Cocoa|PP13275|calphoglin calcium binding and coiled-coil domain 1 protein-coding chr11-41 chr11 108222813 108223023 + 95.0 0.000 promoter-TSS (NM_002519) promoter-TSS (NM_002519) 86 NM_000051 472 Hs.367437 NM_000051 ENSG00000149311 ATM AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1 ATM serine/threonine kinase protein-coding chr2-22 chr2 74458192 74458402 + 94.9 0.000 promoter-TSS (NM_012477) promoter-TSS (NM_012477) -141 NM_012477 23559 Hs.516114 NM_012477 ENSG00000239779 WBP1 WBP-1 WW domain binding protein 1 protein-coding chr11-72 chr11 57712342 57712552 + 94.6 0.000 promoter-TSS (NM_001144012) promoter-TSS (NM_001144012) -76 NR_037646 100528016 Hs.166011 NR_037646 TMX2-CTNND1 CAS|CTNND1|p120(cas)|p120(ctn) TMX2-CTNND1 readthrough (NMD candidate) ncRNA chr2-8 chr2 218270214 218270424 + 94.3 0.000 promoter-TSS (NM_015488) promoter-TSS (NM_015488) -182 NM_001302545 14 Hs.83347 NM_001087 ENSG00000127837 AAMP - angio associated migratory cell protein protein-coding chr19-43 chr19 55259052 55259262 + 93.9 0.000 promoter-TSS (NM_014931) promoter-TSS (NM_014931) -140 NM_014931 22870 Hs.515610 NM_014931 ENSG00000105063 PPP6R1 KIAA1115|PP6R1|SAP190|SAPS1 protein phosphatase 6 regulatory subunit 1 protein-coding chr2-19 chr2 110101347 110101557 + 93.6 0.000 intron (NM_005434, intron 1 of 3) intron (NM_005434, intron 1 of 3) -14929 NR_039941 100616123 NR_039941 ENSG00000264979 MIR4436B1 MIR4436B|hsa-mir-4436b-1 microRNA 4436b-1 ncRNA chr5-3 chr5 177426406 177426616 + 93.6 0.000 promoter-TSS (NM_001364164) promoter-TSS (NM_001364164) -165 NM_001364164 2870 Hs.235116 NM_002082 ENSG00000198055 GRK6 GPRK6 G protein-coupled receptor kinase 6 protein-coding chr19-46 chr19 42325367 42325577 + 93.4 0.000 promoter-TSS (NM_001410) promoter-TSS (NM_001410) -163 NM_001410 1954 Hs.132483 NM_001410 ENSG00000105429 MEGF8 C19orf49|CRPT2|EGFL4|SBP1 multiple EGF like domains 8 protein-coding chr7-23 chr7 1538157 1538367 + 93.1 0.000 intron (NM_002360, intron 1 of 2) intron (NM_002360, intron 1 of 2) -3382 NR_149036 100128653 Hs.656985 NR_149036 LOC100128653 - uncharacterized LOC100128653 ncRNA chr4-5 chr4 3955709 3955919 + 93.0 0.000 promoter-TSS (NR_130740) promoter-TSS (NR_130740) -386 NR_130740 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr9-9 chr9 136886310 136886520 + 93.0 0.000 promoter-TSS (NM_021138) promoter-TSS (NM_021138) -101 NM_021138 7186 Hs.522506 NM_021138 ENSG00000127191 TRAF2 MGC:45012|RNF117|TRAP|TRAP3 TNF receptor associated factor 2 protein-coding chr1-37 chr1 110339139 110339349 + 92.9 0.000 promoter-TSS (NR_036595) promoter-TSS (NR_036595) -73 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 RBM15-AS1 AS-RBM15 RBM15 antisense RNA 1 ncRNA chr16-27 chr16 28846381 28846591 + 92.7 0.000 promoter-TSS (NM_003321) promoter-TSS (NM_003321) -114 NM_001308293 25970 Hs.15744 NM_015503 ENSG00000178188 SH2B1 PSM|SH2B SH2B adaptor protein 1 protein-coding chr11-56 chr11 59615913 59616123 + 92.6 0.000 promoter-TSS (NM_002556) promoter-TSS (NM_002556) -244 NM_002556 5007 Hs.597091 NM_002556 ENSG00000110048 OSBP OSBP1 oxysterol binding protein protein-coding chr12-4 chr12 56104292 56104502 + 92.5 0.000 promoter-TSS (NM_006191) promoter-TSS (NM_006191) -162 NM_006191 5036 Hs.524498 NM_006191 ENSG00000170515 PA2G4 EBP1|HG4-1|p38-2G4 proliferation-associated 2G4 protein-coding chr7-8 chr7 993197 993407 + 92.3 0.000 intron (NR_156697, intron 4 of 4) intron (NR_156697, intron 4 of 4) 10121 NM_017781 54905 Hs.272795 NM_017781 ENSG00000073067 CYP2W1 - cytochrome P450 family 2 subfamily W member 1 protein-coding chr4-18 chr4 48780399 48780609 + 92.0 0.000 promoter-TSS (NM_015030) promoter-TSS (NM_015030) -205 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chr7-24 chr7 42932145 42932355 + 91.9 0.000 promoter-TSS (NM_031903) promoter-TSS (NM_031903) -76 NM_002787 5683 Hs.333786 NM_002787 ENSG00000106588 PSMA2 HC3|MU|PMSA2|PSC2 proteasome subunit alpha 2 protein-coding chr6-2 chr6 42984360 42984570 + 91.9 0.000 promoter-TSS (NM_180977) promoter-TSS (NM_180977) -105 NM_001270476 5528 Hs.533308 NM_006245 ENSG00000112640 PPP2R5D B56D|B56delta|MRD35 protein phosphatase 2 regulatory subunit B'delta protein-coding chr15-6 chr15 41332583 41332793 + 91.8 0.000 promoter-TSS (NM_007280) promoter-TSS (NM_007280) -67 NM_001317860 11339 Hs.661645 NM_007280 ENSG00000104147 OIP5 5730547N13Rik|CT86|LINT-25|MIS18B|MIS18beta|hMIS18beta Opa interacting protein 5 protein-coding chr22-11 chr22 50582873 50583083 + 91.8 0.000 promoter-TSS (NM_005198) promoter-TSS (NM_005198) 21 NR_027928 386593 Hs.439777 NR_027928 ENSG00000254413 CHKB-CPT1B CHKL-CPT1B|CPT1-M|CPT1B|CPTI-M CHKB-CPT1B readthrough (NMD candidate) ncRNA chr2-31 chr2 62705319 62705529 + 91.4 0.000 promoter-TSS (NM_001354221) promoter-TSS (NM_001354221) -200 NM_001354212 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr7-10 chr7 1160227 1160437 + 91.4 0.000 promoter-TSS (NM_001365383) promoter-TSS (NM_001365383) -42 NR_110067 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr19-21 chr19 1103874 1104084 + 91.4 0.000 promoter-TSS (NM_001039847) promoter-TSS (NM_001039847) -15 NM_001039847 2879 Hs.433951 NM_002085 ENSG00000167468 GPX4 GPx-4|GSHPx-4|MCSP|PHGPx|SMDS|snGPx|snPHGPx glutathione peroxidase 4 protein-coding chr9-14 chr9 33264793 33265003 + 91.4 0.000 promoter-TSS (NM_001172415) promoter-TSS (NM_001172415) 19 NM_001195536 51510 Hs.635313 NM_016410 ENSG00000086065 CHMP5 C9orf83|CGI-34|HSPC177|PNAS-2|SNF7DC2|Vps60 charged multivesicular body protein 5 protein-coding chr2-20 chr2 74529707 74529917 + 91.3 0.000 promoter-TSS (NM_181575) promoter-TSS (NM_181575) -106 NM_181575 550 Hs.411480 NM_181575 ENSG00000115307 AUP1 - AUP1 lipid droplet regulating VLDL assembly factor protein-coding chr11-45 chr11 77994716 77994926 + 91.3 0.000 promoter-TSS (NM_033547) promoter-TSS (NM_033547) -153 NM_033547 92105 Hs.533723 NM_033547 ENSG00000149262 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding chr1-56 chr1 152048002 152048212 + 91.3 0.000 Intergenic Intergenic -11103 NM_005620 6282 Hs.417004 NM_005620 ENSG00000163191 S100A11 HEL-S-43|MLN70|S100C S100 calcium binding protein A11 protein-coding chr16-17 chr16 85395571 85395781 + 91.1 0.000 Intergenic Intergenic -89351 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr19-60 chr19 11155809 11156019 + 91.1 0.000 promoter-TSS (NM_001317032) promoter-TSS (NM_001317032) -102 NM_001317031 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr19-6 chr19 2096763 2096973 + 91.0 0.000 promoter-TSS (NM_001039846) promoter-TSS (NM_001039846) -47 NM_001363588 113177 Hs.424049 NM_052878 ENSG00000099840 IZUMO4 C19orf36|IMAGE:4215339 IZUMO family member 4 protein-coding chr2-10 chr2 36966576 36966786 + 90.8 0.000 promoter-TSS (NM_003162) promoter-TSS (NM_003162) -145 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr1-40 chr1 47314208 47314418 + 90.7 0.000 promoter-TSS (NM_001282937) promoter-TSS (NM_001282937) -166 NM_001282938 6491 Hs.525198 NM_003035 ENSG00000123473 STIL MCPH7|SIL STIL centriolar assembly protein protein-coding chr17-21 chr17 77452001 77452211 + 90.7 0.000 intron (NM_001293697, intron 1 of 9) intron (NM_001293697, intron 1 of 9) 622 NM_001293697 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr17-52 chr17 45092997 45093207 + 90.6 0.000 intron (NM_021079, intron 3 of 11) intron (NM_021079, intron 3 of 11) 21331 NR_106842 102465470 NR_106842 ENSG00000277249 MIR6784 hsa-mir-6784 microRNA 6784 ncRNA chr13-2 chr13 113490759 113490969 + 90.5 0.000 promoter-TSS (NM_017905) promoter-TSS (NM_017905) -153 NM_001014283 55208 Hs.682987 NM_018185 ENSG00000150401 DCUN1D2 C13orf17 defective in cullin neddylation 1 domain containing 2 protein-coding chr11-34 chr11 65419008 65419218 + 90.5 0.000 Intergenic Intergenic -3685 NR_131012 283131 Hs.523789 NR_002802 ENSG00000245532 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 ncRNA chr7-16 chr7 75528103 75528313 + 90.4 0.000 promoter-TSS (NR_028059) promoter-TSS (NR_028059) -85 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr17-18 chr17 81860677 81860887 + 90.3 0.000 promoter-TSS (NM_000918) promoter-TSS (NM_000918) -247 NM_000918 5034 Hs.464336 NM_000918 ENSG00000185624 P4HB CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB prolyl 4-hydroxylase subunit beta protein-coding chr17-24 chr17 42388455 42388665 + 90.1 0.000 promoter-TSS (NM_139276) promoter-TSS (NM_139276) -65 NM_139276 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr9-25 chr9 133030507 133030717 + 90.0 0.000 promoter-TSS (NR_135119) promoter-TSS (NR_135119) -63 NM_001286709 9328 Hs.495417 NM_012087 ENSG00000148308 GTF3C5 TFIIIC63|TFIIICepsilon|TFiiiC2-63 general transcription factor IIIC subunit 5 protein-coding chr9-15 chr9 134602670 134602880 + 89.9 0.000 Intergenic Intergenic -39030 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr9-21 chr9 137240947 137241157 + 89.8 0.000 promoter-TSS (NM_006088) promoter-TSS (NM_006088) -235 NM_006088 10383 Hs.433615 NM_006088 ENSG00000188229 TUBB4B Beta2|LCAEOD|TUBB2|TUBB2C tubulin beta 4B class IVb protein-coding chr19-34 chr19 797090 797300 + 89.7 0.000 promoter-TSS (NM_031990) promoter-TSS (NM_031990) -257 NM_031990 5725 Hs.172550 NM_002819 ENSG00000011304 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding chr14-15 chr14 73458621 73458831 + 89.6 0.000 promoter-TSS (NM_001320114) promoter-TSS (NM_001320114) -146 NM_001005743 8650 Hs.525443 NM_003744 ENSG00000133961 NUMB C14orf41|S171|c14_5527 NUMB endocytic adaptor protein protein-coding chr1-32 chr1 17054056 17054266 + 89.2 0.000 promoter-TSS (NM_003000) promoter-TSS (NM_003000) 9 NM_003000 6390 Hs.465924 NM_003000 ENSG00000117118 SDHB CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP succinate dehydrogenase complex iron sulfur subunit B protein-coding chr19-50 chr19 19385613 19385823 + 88.7 0.000 promoter-TSS (NM_001300946) promoter-TSS (NM_001300946) -85 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr7-21 chr7 66996679 66996889 + 88.6 0.000 promoter-TSS (NM_018264) promoter-TSS (NM_018264) -21 NR_134540 55253 Hs.520917 NM_018264 ENSG00000198874 TYW1 RSAFD1|TYW1A|YPL207W tRNA-yW synthesizing protein 1 homolog protein-coding chr3-9 chr3 120094864 120095074 + 88.5 0.000 promoter-TSS (NM_001146156) promoter-TSS (NM_001146156) -522 NM_001354596 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr15-14 chr15 78507318 78507528 + 88.5 0.000 promoter-TSS (NM_001013619) promoter-TSS (NM_001013619) -141 NM_001083612 123688 Hs.307962 NM_001013619 ENSG00000188266 HYKK AGPHD1 hydroxylysine kinase protein-coding chr11-19 chr11 65354594 65354804 + 88.5 0.000 promoter-TSS (NM_145719) promoter-TSS (NM_145719) -52 NM_145719 220359 Hs.632121 NM_145719 ENSG00000173825 TIGD3 - tigger transposable element derived 3 protein-coding chr19-56 chr19 3626864 3627074 + 88.5 0.000 promoter-TSS (NM_021231) promoter-TSS (NM_021231) -154 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr11-39 chr11 3797642 3797852 + 88.4 0.000 promoter-TSS (NM_001365127) promoter-TSS (NM_001365127) 23 NM_001256235 27315 Hs.133968 NM_014489 ENSG00000148985 PGAP2 CWH43-N|FRAG1|HPMRS3|MRT17|MRT21 post-GPI attachment to proteins 2 protein-coding chr19-57 chr19 14419350 14419560 + 88.3 0.000 promoter-TSS (NR_046366) promoter-TSS (NR_046366) -72 NR_046366 10212 Hs.311609 NM_005804 ENSG00000123136 DDX39A BAT1|BAT1L|DDX39|DDXL|URH49 DExD-box helicase 39A protein-coding chr17-49 chr17 82267589 82267799 + 88.3 0.000 intron (NM_001363749, intron 1 of 8) intron (NM_001363749, intron 1 of 8) 6006 NM_001363749 1453 Hs.631725 NM_001893 ENSG00000141551 CSNK1D ASPS|CKI-delta|CKId|CKIdelta|FASPS2|HCKID casein kinase 1 delta protein-coding chr11-32 chr11 123062254 123062464 + 88.0 0.000 promoter-TSS (NM_153201) promoter-TSS (NM_153201) -223 NM_153201 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr5-7 chr5 160119644 160119854 + 87.9 0.000 promoter-TSS (NM_001349735) promoter-TSS (NM_001349735) -299 NM_001267035 114825 Hs.744960 NM_052927 ENSG00000170234 PWWP2A MST101 PWWP domain containing 2A protein-coding chr19-48 chr19 49676799 49677009 + 87.5 0.000 promoter-TSS (NM_001207042) promoter-TSS (NM_001207042) -248 NR_033397 3276 Hs.20521 NM_001536 ENSG00000126457 PRMT1 ANM1|HCP1|HRMT1L2|IR1B4 protein arginine methyltransferase 1 protein-coding chr11-33 chr11 1262607 1262817 + 87.5 0.000 TTS (NM_002458) TTS (NM_002458) 6107 NR_106802 102466725 NR_106802 ENSG00000275669 MIR6744 hsa-mir-6744 microRNA 6744 ncRNA chr2-17 chr2 27370334 27370544 + 87.5 0.000 promoter-TSS (NM_001318965) promoter-TSS (NM_001318965) 18 NM_001034116 8890 Hs.169474 NM_015636 ENSG00000115211 EIF2B4 EIF-2B|EIF2B|EIF2Bdelta eukaryotic translation initiation factor 2B subunit delta protein-coding chr16-34 chr16 53645 53855 + 87.4 0.000 promoter-TSS (NM_016310) promoter-TSS (NM_016310) -78 NM_024571 79622 Hs.15277 NM_024571 ENSG00000161981 SNRNP25 C16orf33 small nuclear ribonucleoprotein U11/U12 subunit 25 protein-coding chr4-14 chr4 1192202 1192412 + 87.2 0.000 intron (NM_001199021, intron 1 of 7) intron (NM_001199021, intron 1 of 7) 16655 NR_024569 100130872 Hs.302963 NR_024569 LOC100130872 - uncharacterized LOC100130872 ncRNA chr16-23 chr16 75517349 75517559 + 87.2 0.000 Intergenic CpG 17716 NM_024533 23563 Hs.745424 NM_012126 ENSG00000135702 CHST5 I-GlcNAc-6-ST|I-GlcNAc6ST|glcNAc6ST-3|gn6st-3|hIGn6ST carbohydrate sulfotransferase 5 protein-coding chr3-28 chr3 93470499 93470709 + 87.1 0.000 Intergenic SAR|Satellite|Satellite 503477 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr9-17 chr9 34989428 34989638 + 87.0 0.000 promoter-TSS (NM_001135004) promoter-TSS (NM_001135004) -108 NM_001135004 25822 Hs.237506 NM_012266 ENSG00000137094 DNAJB5 Hsc40 DnaJ heat shock protein family (Hsp40) member B5 protein-coding chr22-16 chr22 37844374 37844584 + 86.6 0.000 promoter-TSS (NM_138797) promoter-TSS (NM_138797) -32 NR_036556 129138 Hs.135259 NM_138797 ENSG00000100124 ANKRD54 LIAR ankyrin repeat domain 54 protein-coding chr22-13 chr22 37658399 37658609 + 86.6 0.000 promoter-TSS (NR_109952) promoter-TSS (NR_109952) -127 NR_109952 101927051 NR_109952 ENSG00000233360 LOC101927051 - uncharacterized LOC101927051 ncRNA chr19-106 chr19 2427640 2427850 + 86.6 0.000 promoter-TSS (NM_012458) promoter-TSS (NM_012458) -159 NM_012458 26517 Hs.75056 NM_012458 ENSG00000099800 TIMM13 TIM13|TIM13B|TIMM13A|TIMM13B|ppv1 translocase of inner mitochondrial membrane 13 protein-coding chr3-27 chr3 113696714 113696924 + 86.6 0.000 promoter-TSS (NR_111981) promoter-TSS (NR_111981) -173 NR_111981 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr7-25 chr7 77122374 77122584 + 86.4 0.000 promoter-TSS (NM_020879) promoter-TSS (NM_020879) -136 NM_020879 57639 Hs.113940 NM_020879 ENSG00000135205 CCDC146 - coiled-coil domain containing 146 protein-coding chr18-4 chr18 9475278 9475488 + 86.4 0.000 promoter-TSS (NM_006788) promoter-TSS (NM_006788) -130 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr12-12 chr12 49741285 49741495 + 86.4 0.000 promoter-TSS (NM_003217) promoter-TSS (NM_003217) -167 NM_003217 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr17-25 chr17 78862282 78862492 + 86.1 0.000 intron (NM_003255, intron 3 of 4) intron (NM_003255, intron 3 of 4) -21860 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr19-132 chr19 49869579 49869789 + 86.0 0.000 3' UTR (NM_001278160, exon 5 of 5) 3' UTR (NM_001278160, exon 5 of 5) -2108 NM_007254 11284 Hs.78016 NM_007254 ENSG00000039650 PNKP AOA4|EIEE10|MCSZ|PNK polynucleotide kinase 3'-phosphatase protein-coding chr9-22 chr9 36190707 36190917 + 86.0 0.000 promoter-TSS (NM_001184762) promoter-TSS (NM_001184762) -44 NM_001184762 1211 Hs.522114 NM_001833 ENSG00000122705 CLTA LCA clathrin light chain A protein-coding chr15-11 chr15 89088157 89088367 + 86.0 0.000 promoter-TSS (NM_152924) promoter-TSS (NM_152924) -194 NM_007011 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr14-12 chr14 54396808 54397018 + 85.9 0.000 promoter-TSS (NM_001130851) promoter-TSS (NM_001130851) -42 NM_001130851 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr10-14 chr10 101353880 101354090 + 85.9 0.000 promoter-TSS (NM_033637) promoter-TSS (NM_033637) -48 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr17-19 chr17 63842748 63842958 + 85.8 0.000 promoter-TSS (NM_001098426) promoter-TSS (NM_001098426) -168 NM_001098426 6603 Hs.250581 NM_003077 ENSG00000108604 SMARCD2 BAF60B|CRACD2|PRO2451|Rsc6p|SGD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding chr19-32 chr19 48714159 48714369 + 85.5 0.000 intron (NM_001297753, intron 4 of 6) CpG 2693 NM_182574 284358 Hs.191815 NM_182574 ENSG00000176909 MAMSTR MASTR MEF2 activating motif and SAP domain containing transcriptional regulator protein-coding chr11-125 chr11 63974351 63974561 + 85.4 0.000 promoter-TSS (NM_004074) promoter-TSS (NM_004074) -164 NM_004074 1351 Hs.743989 NM_004074 ENSG00000176340 COX8A COX|COX8|COX8-2|COX8L|VIII|VIII-L cytochrome c oxidase subunit 8A protein-coding chr17-30 chr17 75289398 75289608 + 85.2 0.000 promoter-TSS (NM_021734) promoter-TSS (NM_021734) -54 NM_001126122 60386 Hs.514470 NM_021734 ENSG00000125454 SLC25A19 DNC|MCPHA|MUP1|THMD3|THMD4|TPC solute carrier family 25 member 19 protein-coding chr11-38 chr11 65040947 65041157 + 85.2 0.000 promoter-TSS (NM_001367486) promoter-TSS (NM_001367486) 119 NR_160028 29901 Hs.23642 NM_013299 ENSG00000168061 SAC3D1 HSU79266|SHD1 SAC3 domain containing 1 protein-coding chr1-54 chr1 161166237 161166447 + 85.0 0.000 promoter-TSS (NM_001122764) promoter-TSS (NM_001122764) -84 NM_001350130 5498 Hs.517373 NM_000309 ENSG00000143224 PPOX PPO|V290M|VP protoporphyrinogen oxidase protein-coding chr7-26 chr7 1028904 1029114 + 85.0 0.000 promoter-TSS (NR_156697) promoter-TSS (NR_156697) -577 NR_146966 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr1-51 chr1 12019256 12019466 + 85.0 0.000 promoter-TSS (NM_021933) promoter-TSS (NM_021933) -137 NM_021933 60672 Hs.8595 NM_021933 ENSG00000116691 MIIP IIP45 migration and invasion inhibitory protein protein-coding chr16-14 chr16 1678099 1678309 + 84.8 0.000 promoter-TSS (NM_144570) promoter-TSS (NM_144570) -75 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 JPT2 C16orf34|HN1L|L11 Jupiter microtubule associated homolog 2 protein-coding chr10-9 chr10 16817405 16817615 + 84.6 0.000 promoter-TSS (NM_012425) promoter-TSS (NM_012425) -56 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr19-55 chr19 48364001 48364211 + 84.6 0.000 promoter-TSS (NM_012451) promoter-TSS (NM_012451) -166 NM_018273 55260 Hs.351335 NM_018273 ENSG00000161558 TMEM143 - transmembrane protein 143 protein-coding chr14-20 chr14 58298238 58298448 + 84.4 0.000 promoter-TSS (NR_029434) promoter-TSS (NR_029434) -161 NM_023000 5926 Hs.161000 NM_002892 ENSG00000032219 ARID4A RBBP-1|RBBP1|RBP-1|RBP1 AT-rich interaction domain 4A protein-coding chr19-54 chr19 4791476 4791686 + 84.2 0.000 promoter-TSS (NM_018708) promoter-TSS (NM_018708) -153 NM_018708 55527 Hs.515082 NM_018708 ENSG00000141965 FEM1A EPRAP fem-1 homolog A protein-coding chr2-14 chr2 100562733 100562943 + 84.2 0.000 promoter-TSS (NM_024065) promoter-TSS (NM_024065) -155 NM_024065 79031 Hs.469459 NM_024065 ENSG00000115539 PDCL3 HTPHLP|PHLP2A|PHLP3|VIAF|VIAF1 phosducin like 3 protein-coding chr19-71 chr19 48624119 48624329 + 84.2 0.000 promoter-TSS (NM_001204160) promoter-TSS (NM_001204160) -805 NM_001204160 56848 Hs.528006 NM_020126 ENSG00000063176 SPHK2 SK 2|SK-2|SPK 2|SPK-2 sphingosine kinase 2 protein-coding chr16-43 chr16 28950721 28950931 + 84.2 0.000 promoter-TSS (NM_032815) promoter-TSS (NM_032815) -171 NM_032815 84901 Hs.513470 NM_032815 ENSG00000176953 NFATC2IP ESC2|NIP45|RAD60 nuclear factor of activated T cells 2 interacting protein protein-coding chr19-99 chr19 45692381 45692591 + 84.1 0.000 promoter-TSS (NM_177542) promoter-TSS (NM_177542) -170 NM_004597 6633 Hs.515472 NM_004597 ENSG00000125743 SNRPD2 SMD2|SNRPD1|Sm-D2 small nuclear ribonucleoprotein D2 polypeptide protein-coding chr19-76 chr19 4912082 4912292 + 84.1 0.000 intron (NM_001290051, intron 2 of 16) intron (NM_001290051, intron 2 of 16) 1820 NM_001290052 29128 Hs.108106 NM_013282 ENSG00000276043 UHRF1 ICBP90|Np95|RNF106|TDRD22|hNP95|hUHRF1|huNp95 ubiquitin like with PHD and ring finger domains 1 protein-coding chr1-29 chr1 33099434 33099644 + 84.1 0.000 intron (NM_001350399, intron 9 of 10) intron (NM_001350399, intron 9 of 10) 17361 NM_001301826 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr12-16 chr12 55817762 55817972 + 84.0 0.000 promoter-TSS (NM_014182) promoter-TSS (NM_014182) -111 NR_026723 84324 Hs.505676 NM_033082 ENSG00000205323 SARNP CIP29|HCC1|HSPC316|THO1 SAP domain containing ribonucleoprotein protein-coding chr10-22 chr10 10911477 10911687 + 84.0 0.000 intron (NM_001326328, intron 2 of 15) LTR86B1|LTR|ERVL 40581 NR_015413 254312 Hs.498620 NR_015413 ENSG00000229240 LINC00710 - long intergenic non-protein coding RNA 710 ncRNA chr22-6 chr22 36388129 36388339 + 84.0 0.000 promoter-TSS (NM_002473) promoter-TSS (NM_002473) -167 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr10-12 chr10 102502131 102502341 + 83.8 0.000 intron (NM_005736, intron 1 of 10) intron (NM_005736, intron 1 of 10) 476 NM_005736 10121 Hs.153961 NM_005736 ENSG00000138107 ACTR1A ARP1|Arp1A|CTRN1 actin related protein 1A protein-coding chr1-24 chr1 85276551 85276761 + 83.8 0.000 promoter-TSS (NM_003921) promoter-TSS (NM_003921) -24 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr12-23 chr12 132593995 132594205 + 83.8 0.000 Intergenic Intergenic 12103 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr3-5 chr3 195443102 195443312 + 83.7 0.000 promoter-TSS (NM_012287) promoter-TSS (NM_012287) -187 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr22-8 chr22 49918438 49918648 + 83.7 0.000 promoter-TSS (NM_024105) promoter-TSS (NM_024105) -91 NM_001284317 79174 Hs.211282 NM_024324 ENSG00000184164 CRELD2 - cysteine rich with EGF like domains 2 protein-coding chr2-16 chr2 69914627 69914837 + 83.7 0.000 promoter-TSS (NM_002357) promoter-TSS (NM_002357) -309 NM_001202514 4084 Hs.468908 NM_002357 ENSG00000059728 MXD1 BHLHC58|MAD|MAD1 MAX dimerization protein 1 protein-coding chr1-36 chr1 3313236 3313446 + 83.7 0.000 intron (NM_022114, intron 3 of 16) (AGCGGAG)n|Simple_repeat|Simple_repeat -141324 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr11-51 chr11 66289189 66289399 + 83.4 0.000 promoter-TSS (NM_001300861) promoter-TSS (NM_001300861) -151 NM_020470 10897 Hs.446445 NM_020470 ENSG00000174851 YIF1A 54TM|FinGER7|YIF1|YIF1P Yip1 interacting factor homolog A, membrane trafficking protein protein-coding chr19-59 chr19 8832671 8832881 + 83.4 0.000 promoter-TSS (NM_144693) promoter-TSS (NM_144693) -472 NM_144693 148156 Hs.349444 NM_144693 ENSG00000167785 ZNF558 - zinc finger protein 558 protein-coding chr16-21 chr16 4734311 4734521 + 83.3 0.000 promoter-TSS (NM_001308089) promoter-TSS (NM_001308089) -39 NM_001242929 124401 Hs.654859 NM_133450 ENSG00000168096 ANKS3 - ankyrin repeat and sterile alpha motif domain containing 3 protein-coding chr7-20 chr7 1532769 1532979 + 83.1 0.000 non-coding (NR_149036, exon 1 of 1) non-coding (NR_149036, exon 1 of 1) 2006 NR_149036 100128653 Hs.656985 NR_149036 LOC100128653 - uncharacterized LOC100128653 ncRNA chr16-53 chr16 85767615 85767825 + 83.1 0.000 Intergenic Intergenic -16624 NR_161453 404550 Hs.461655 NM_206967 ENSG00000154102 C16orf74 - chromosome 16 open reading frame 74 protein-coding chr16-24 chr16 2214937 2215147 + 83.1 0.000 promoter-TSS (NM_001042371) promoter-TSS (NM_001042371) -202 NM_001042371 283871 Hs.442634 NM_001042371 ENSG00000184207 PGP AUM|G3PP|PGPase phosphoglycolate phosphatase protein-coding chr11-44 chr11 844182 844392 + 83.1 0.000 promoter-TSS (NM_001025237) promoter-TSS (NM_001025237) -159 NM_001025237 7106 Hs.654836 NM_003271 ENSG00000214063 TSPAN4 NAG-2|NAG2|TETRASPAN|TM4SF7|TSPAN-4 tetraspanin 4 protein-coding chr7-7 chr7 66628754 66628964 + 83.1 0.000 promoter-TSS (NM_153033) promoter-TSS (NM_153033) -22 NM_001167961 154881 Hs.546627 NM_153033 ENSG00000243335 KCTD7 CLN14|EPM3 potassium channel tetramerization domain containing 7 protein-coding chr12-11 chr12 54279599 54279809 + 83.0 0.000 TTS (NR_157844) TTS (NR_157844) 418 NM_012117 23468 Hs.349283 NM_012117 ENSG00000094916 CBX5 HEL25|HP1|HP1A chromobox 5 protein-coding chr12-6 chr12 50167398 50167608 + 82.7 0.000 promoter-TSS (NM_001331070) promoter-TSS (NM_001331070) 30 NM_001281731 91012 Hs.270525 NM_147190 ENSG00000139624 CERS5 LASS5|Trh4 ceramide synthase 5 protein-coding chr2-35 chr2 234949835 234950045 + 82.7 0.000 Intergenic Intergenic -2077 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr17-16 chr17 78187123 78187333 + 82.6 0.000 promoter-TSS (NM_001010982) promoter-TSS (NM_001010982) -24 NM_001363848 7083 Hs.515122 NM_003258 ENSG00000167900 TK1 TK2 thymidine kinase 1 protein-coding chr14-18 chr14 69317164 69317374 + 82.5 0.000 intron (NM_020692, intron 1 of 15) MLT1K-int|LTR|ERVL-MaLR 57111 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr1-39 chr1 7961450 7961660 + 82.5 0.000 promoter-TSS (NM_007262) promoter-TSS (NM_007262) -99 NM_001123377 11315 Hs.419640 NM_007262 ENSG00000116288 PARK7 DJ-1|DJ1|GATD2|HEL-S-67p Parkinsonism associated deglycase protein-coding chr11-40 chr11 6234886 6235096 + 82.4 0.000 promoter-TSS (NM_001098794) promoter-TSS (NM_001098794) -355 NM_001098794 84067 Hs.501793 NM_032127 ENSG00000051009 FAM160A2 C11orf56|FHIP family with sequence similarity 160 member A2 protein-coding chr1-28 chr1 185157057 185157267 + 82.4 0.000 promoter-TSS (NM_001202423) promoter-TSS (NM_001202423) -5 NM_017673 54823 Hs.134183 NM_017673 ENSG00000116668 SWT1 C1orf26|HsSwt1 SWT1 RNA endoribonuclease homolog protein-coding chr11-52 chr11 67508165 67508375 + 82.4 0.000 promoter-TSS (NM_001271849) promoter-TSS (NM_001271849) -108 NR_073484 10263 Hs.523835 NM_005851 ENSG00000167797 CDK2AP2 DOC-1R|p14 cyclin dependent kinase 2 associated protein 2 protein-coding chr11-54 chr11 65487554 65487764 + 82.2 0.000 Intergenic Intergenic -10079 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 ncRNA chr14-9 chr14 75660986 75661196 + 82.2 0.000 promoter-TSS (NM_015072) promoter-TSS (NM_015072) -155 NM_015072 23093 Hs.709609 NM_015072 ENSG00000119685 TTLL5 CORD19|KIAA0998|STAMP tubulin tyrosine ligase like 5 protein-coding chr17-31 chr17 82037522 82037732 + 82.2 0.000 promoter-TSS (NM_001195218) promoter-TSS (NM_001195218) 70 NM_016286 51181 Hs.9857 NM_016286 ENSG00000169738 DCXR DCR|HCR2|HCRII|KIDCR|P34H|PNTSU|SDR20C1|XR dicarbonyl and L-xylulose reductase protein-coding chr19-112 chr19 3500707 3500917 + 82.1 0.000 promoter-TSS (NM_031304) promoter-TSS (NM_031304) -138 NM_001145165 83475 Hs.515064 NM_031304 ENSG00000129932 DOHH HLRC1|hDOHH deoxyhypusine hydroxylase protein-coding chr4-31 chr4 83034935 83035145 + 82.1 0.000 promoter-TSS (NM_001330727) promoter-TSS (NM_001330727) -143 NM_001330727 51138 Hs.190384 NM_016129 ENSG00000138663 COPS4 CSN4|SGN4 COP9 signalosome subunit 4 protein-coding chr9-26 chr9 134449604 134449814 + 82.1 0.000 Intergenic Intergenic 43149 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr11-36 chr11 66616321 66616531 + 82.1 0.000 promoter-TSS (NM_001198845) promoter-TSS (NM_001198845) -156 NM_001198845 100526737 Hs.523822 NM_001198845 ENSG00000248643 RBM14-RBM4 COAZ|PSP2|RBM14|SIP RBM14-RBM4 readthrough protein-coding chr19-123 chr19 39412148 39412358 + 82.0 0.000 promoter-TSS (NM_001351693) promoter-TSS (NM_001351693) -416 NM_001351693 64857 Hs.631574 NM_022835 ENSG00000090924 PLEKHG2 ARHGEF42|CLG|CTB-60E11.4|LDAMD pleckstrin homology and RhoGEF domain containing G2 protein-coding chr3-4 chr3 130111629 130111839 + 81.9 0.000 promoter-TSS (NR_024252) promoter-TSS (NR_024252) 27 NR_146653 105374104 Hs.587226 NR_146653 ENSG00000249846 LINC02021 - long intergenic non-protein coding RNA 2021 ncRNA chr5-9 chr5 75336945 75337155 + 81.9 0.000 promoter-TSS (NM_000859) promoter-TSS (NM_000859) -118 NM_001364187 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding chr4-7 chr4 2536283 2536493 + 81.5 0.000 promoter-TSS (NM_001366318) promoter-TSS (NM_001366318) -259 NM_001366318 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr11-63 chr11 64917326 64917536 + 81.5 0.000 promoter-TSS (NM_001367971) promoter-TSS (NM_001367971) -222 NM_001367972 23130 Hs.370671 NM_015104 ENSG00000110046 ATG2A - autophagy related 2A protein-coding chr12-19 chr12 48682216 48682426 + 81.4 0.000 promoter-TSS (NM_017822) promoter-TSS (NM_017822) -83 NM_017822 54934 Hs.505412 NM_017822 ENSG00000139620 KANSL2 C12orf41|NSL2 KAT8 regulatory NSL complex subunit 2 protein-coding chr19-81 chr19 11435307 11435517 + 81.4 0.000 promoter-TSS (NM_001302454) promoter-TSS (NM_001302454) 155 NM_001289104 5589 Hs.610830 NM_002743 ENSG00000130175 PRKCSH AGE-R2|G19P1|GIIB|PCLD|PCLD1|PKCSH|PLD1|VASAP-60 protein kinase C substrate 80K-H protein-coding chr15-16 chr15 41774409 41774619 + 81.3 0.000 promoter-TSS (NM_014994) promoter-TSS (NM_014994) 30 NR_049762 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr19-110 chr19 35648103 35648313 + 81.3 0.000 promoter-TSS (NM_001863) promoter-TSS (NM_001863) -115 NM_001863 1340 Hs.431668 NM_001863 ENSG00000126267 COX6B1 COX6B|COXG|COXVIb1 cytochrome c oxidase subunit 6B1 protein-coding chr4-10 chr4 1347024 1347234 + 81.3 0.000 promoter-TSS (NM_001317934) promoter-TSS (NM_001317934) -79 NM_020894 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chrX-4 chrX 49191090 49191300 + 81.2 0.000 intron (NM_003179, intron 6 of 6) intron (NM_003179, intron 6 of 6) -4822 NM_006150 4007 Hs.732712 NM_006150 ENSG00000012211 PRICKLE3 LMO6|Pk3 prickle planar cell polarity protein 3 protein-coding chr1-20 chr1 88992805 88993015 + 81.2 0.000 promoter-TSS (NM_001349448) promoter-TSS (NM_001349448) 50 NR_146184 56267 Hs.481898 NM_001008661 ENSG00000137944 KYAT3 CCBL2|KAT3|KATIII kynurenine aminotransferase 3 protein-coding chr17-40 chr17 76671687 76671897 + 80.8 0.000 promoter-TSS (NR_130916) promoter-TSS (NR_130916) -136 NR_130916 105274304 Hs.572495 NR_130916 ENSG00000261335 LOC105274304 - uncharacterized LOC105274304 ncRNA chr1-70 chr1 27914591 27914801 + 80.8 0.000 promoter-TSS (NM_002946) promoter-TSS (NM_002946) 101 NM_001355128 6118 Hs.79411 NM_002946 ENSG00000117748 RPA2 REPA2|RP-A p32|RP-A p34|RPA32 replication protein A2 protein-coding chr6-3 chr6 43013922 43014132 + 80.5 0.000 promoter-TSS (NR_040101) promoter-TSS (NR_040101) -44 NM_001318942 4201 Hs.278362 NM_014623 ENSG00000124733 MEA1 HYS|MEA male-enhanced antigen 1 protein-coding chr1-34 chr1 150697220 150697430 + 80.5 0.000 promoter-TSS (NM_018178) promoter-TSS (NM_018178) -171 NM_018178 55204 Hs.203699 NM_018178 ENSG00000143457 GOLPH3L GPP34R golgi phosphoprotein 3 like protein-coding chr16-30 chr16 88811983 88812193 + 80.5 0.000 promoter-TSS (NM_000485) promoter-TSS (NM_000485) -160 NM_001030018 353 Hs.28914 NM_000485 ENSG00000198931 APRT AMP|APRTD adenine phosphoribosyltransferase protein-coding chr21-11 chr21 33915774 33915984 + 80.4 0.000 promoter-TSS (NM_001697) promoter-TSS (NM_001697) -75 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr15-15 chr15 75694486 75694696 + 80.4 0.000 intron (NM_001897, intron 1 of 9) intron (NM_001897, intron 1 of 9) 18257 NM_001897 1464 Hs.513044 NM_001897 ENSG00000173546 CSPG4 HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2 chondroitin sulfate proteoglycan 4 protein-coding chr22-14 chr22 41286236 41286446 + 80.4 0.000 promoter-TSS (NM_001278651) promoter-TSS (NM_001278651) -154 NM_001278651 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr1-16 chr1 2391554 2391764 + 80.4 0.000 promoter-TSS (NR_125361) promoter-TSS (NR_125361) -105 NR_125361 79906 Hs.642701 NM_024848 ENSG00000116151 MORN1 - MORN repeat containing 1 protein-coding chr11-65 chr11 95231342 95231552 + 79.9 0.000 promoter-TSS (NM_144665) promoter-TSS (NM_144665) -245 NM_144665 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr17-32 chr17 28335580 28335790 + 79.7 0.000 promoter-TSS (NM_001267778) promoter-TSS (NM_001267778) -76 NM_021137 7126 Hs.76090 NM_021137 ENSG00000109079 TNFAIP1 B12|B61|BTBD34|EDP1|hBACURD2 TNF alpha induced protein 1 protein-coding chr12-15 chr12 121352336 121352546 + 79.5 0.000 promoter-TSS (NM_001330489) promoter-TSS (NM_001330489) -30 NM_001330489 51433 Hs.7101 NM_016237 ENSG00000089053 ANAPC5 APC5 anaphase promoting complex subunit 5 protein-coding chr19-102 chr19 48637529 48637739 + 79.4 0.000 promoter-TSS (NM_001352) promoter-TSS (NM_001352) -255 NM_001352 1628 Hs.414480 NM_001352 ENSG00000105516 DBP DABP|taxREB302 D-box binding PAR bZIP transcription factor protein-coding chr2-5 chr2 676835 677045 + 79.3 0.000 promoter-TSS (NM_001352681) promoter-TSS (NM_001352681) -236 NM_001352681 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr12-46 chr12 51371528 51371738 + 79.2 0.000 intron (NM_007210, intron 4 of 11) intron (NM_007210, intron 4 of 11) -19684 NM_001258401 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr1-14 chr1 30718271 30718481 + 79.2 0.000 promoter-TSS (NR_034182) promoter-TSS (NR_034182) -396 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr1-18 chr1 161225796 161226006 + 79.2 0.000 promoter-TSS (NM_001286373) promoter-TSS (NM_001286373) -38 NM_001286373 84134 Hs.321653 NM_032174 ENSG00000158882 TOMM40L TOMM40B translocase of outer mitochondrial membrane 40 like protein-coding chr16-39 chr16 4802761 4802971 + 79.1 0.000 promoter-TSS (NM_024589) promoter-TSS (NM_024589) 84 NM_024589 79641 Hs.459795 NM_024589 ENSG00000067836 ROGDI KTZS rogdi atypical leucine zipper protein-coding chrX-3 chrX 20141861 20142071 + 79.1 0.000 promoter-TSS (NM_001412) promoter-TSS (NM_001412) -128 NM_001412 1964 Hs.522590 NM_001412 ENSG00000173674 EIF1AX EIF1A|EIF1AP1|EIF4C|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A X-linked protein-coding chr20-2 chr20 33993280 33993490 + 79.1 0.000 promoter-TSS (NM_016732) promoter-TSS (NM_016732) -526 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr6-12 chr6 53326611 53326821 + 78.9 0.000 intron (NM_001242830, intron 1 of 6) intron (NM_001242830, intron 1 of 6) 10901 NR_046241 647190 Hs.520189 NR_046241 RPS16P5 RPS16_3_702 ribosomal protein S16 pseudogene 5 pseudo chr19-85 chr19 42242650 42242860 + 78.9 0.000 promoter-TSS (NM_019884) promoter-TSS (NM_019884) -153 NM_019884 2931 Hs.466828 NM_019884 ENSG00000105723 GSK3A - glycogen synthase kinase 3 alpha protein-coding chr18-3 chr18 51198157 51198367 + 78.8 0.000 promoter-TSS (NM_016626) promoter-TSS (NM_016626) -581 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr1-64 chr1 42767046 42767256 + 78.8 0.000 promoter-TSS (NM_024097) promoter-TSS (NM_024097) -67 NM_001146289 64175 Hs.720014 NM_022356 ENSG00000117385 P3H1 GROS1|LEPRE1|OI8 prolyl 3-hydroxylase 1 protein-coding chr16-49 chr16 88782497 88782707 + 78.8 0.000 intron (NM_001142864, intron 1 of 50) intron (NM_001142864, intron 1 of 50) 2618 NM_001142864 9780 Hs.377001 NM_001142864 ENSG00000103335 PIEZO1 DHS|FAM38A|LMPH3|LMPHM6|Mib piezo type mechanosensitive ion channel component 1 protein-coding chr19-49 chr19 5622850 5623060 + 78.7 0.000 promoter-TSS (NM_001320571) promoter-TSS (NM_001320571) -128 NM_001320571 6294 Hs.728802 NM_002967 ENSG00000160633 SAFB HAP|HET|SAB-B1|SAF-B|SAF-B1|SAFB1 scaffold attachment factor B protein-coding chr12-17 chr12 124411568 124411778 + 78.5 0.000 intron (NM_001077261, intron 15 of 47) intron (NM_001077261, intron 15 of 47) -74431 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr10-10 chr10 95693931 95694141 + 78.5 0.000 promoter-TSS (NM_015631) promoter-TSS (NM_015631) 107 NM_001143973 26123 Hs.438991 NM_015631 ENSG00000119977 TCTN3 C10orf61|JBTS18|OFD4|TECT3 tectonic family member 3 protein-coding chr5-6 chr5 168579720 168579930 + 78.4 0.000 promoter-TSS (NM_024594) promoter-TSS (NM_024594) -457 NM_024594 79646 Hs.388400 NM_024594 ENSG00000120137 PANK3 - pantothenate kinase 3 protein-coding chr9-27 chr9 94166034 94166244 + 78.2 0.000 Intergenic CpG -9818 NR_029476 406881 NR_029476 ENSG00000199165 MIRLET7A1 LET7A1|MIRNLET7A1|let-7a-1 microRNA let-7a-1 ncRNA chr19-58 chr19 43668706 43668916 + 78.2 0.000 intron (NM_001005376, intron 1 of 6) CpG 1358 NM_001005377 5329 Hs.466871 NM_002659 ENSG00000011422 PLAUR CD87|U-PAR|UPAR|URKR plasminogen activator, urokinase receptor protein-coding chrX-7 chrX 47217909 47218119 + 78.2 0.000 promoter-TSS (NM_033018) promoter-TSS (NM_033018) -289 NM_033018 5127 Hs.496068 NM_006201 ENSG00000102225 CDK16 PCTAIRE|PCTAIRE1|PCTGAIRE|PCTK1 cyclin dependent kinase 16 protein-coding chr3-12 chr3 49723962 49724172 + 78.1 0.000 promoter-TSS (NM_013334) promoter-TSS (NM_013334) -93 NM_013334 29925 Hs.567488 NM_013334 ENSG00000173540 GMPPB LGMDR19|MDDGA14|MDDGB14|MDDGC14 GDP-mannose pyrophosphorylase B protein-coding chr19-96 chr19 48619282 48619492 + 78.0 0.000 promoter-TSS (NM_001204159) promoter-TSS (NM_001204159) 96 NM_001243876 56848 Hs.528006 NM_020126 ENSG00000063176 SPHK2 SK 2|SK-2|SPK 2|SPK-2 sphingosine kinase 2 protein-coding chr15-13 chr15 67254633 67254843 + 78.0 0.000 promoter-TSS (NM_024666) promoter-TSS (NM_024666) -2 NM_001271886 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding chr9-10 chr9 137086776 137086986 + 78.0 0.000 promoter-TSS (NM_016219) promoter-TSS (NM_016219) -64 NR_027447 100289341 Hs.593896 NR_027447 ENSG00000268996 MAN1B1-DT MAN1B1-AS1 MAN1B1 divergent transcript ncRNA chr14-14 chr14 73027038 73027248 + 77.9 0.000 promoter-TSS (NM_001281734) promoter-TSS (NM_001281734) -37 NM_021260 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr9-32 chr9 129036373 129036583 + 77.8 0.000 promoter-TSS (NR_138425) promoter-TSS (NR_138425) -148 NR_138425 84895 Hs.632693 NM_032809 ENSG00000148343 MIGA2 C9orf54|FAM73B mitoguardin 2 protein-coding chr19-107 chr19 32971980 32972190 + 77.8 0.000 promoter-TSS (NM_001300978) promoter-TSS (NM_001300978) -127 NM_032816 84902 Hs.599703 NM_032816 ENSG00000121289 CEP89 CCDC123|CEP123 centrosomal protein 89 protein-coding chr12-39 chr12 14803525 14803735 + 77.8 0.000 promoter-TSS (NM_175874) promoter-TSS (NM_175874) -40 NM_175874 144608 Hs.659951 NM_175874 ENSG00000182993 C12orf60 - chromosome 12 open reading frame 60 protein-coding chr1-19 chr1 2322274 2322484 + 77.7 0.000 intron (NM_024848, intron 13 of 13) CpG 30282 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr10-11 chr10 511157 511367 + 77.5 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -117302 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr1-104 chr1 155745604 155745814 + 77.5 0.000 promoter-TSS (NR_024117).2 promoter-TSS (NR_024117).2 -59 NR_024117 100129405 Hs.656361 NR_024117 MSTO2P MSTO2 misato family member 2, pseudogene pseudo chr11-82 chr11 68030418 68030628 + 77.5 0.000 promoter-TSS (NM_002496) promoter-TSS (NM_002496) -158 NM_002496 4728 Hs.90443 NM_002496 ENSG00000110717 NDUFS8 CI-23k|CI23KD|MC1DN2|TYKY NADH:ubiquinone oxidoreductase core subunit S8 protein-coding chr9-13 chr9 35814997 35815207 + 77.3 0.000 promoter-TSS (NM_032593) promoter-TSS (NM_032593) -60 NM_032593 84681 Hs.70573 NM_032593 ENSG00000137133 HINT2 HIT-17 histidine triad nucleotide binding protein 2 protein-coding chr3-10 chr3 128123782 128123992 + 77.3 0.000 promoter-TSS (NM_001319084) promoter-TSS (NM_001319084) -75 NM_003707 8607 Hs.272822 NM_003707 ENSG00000175792 RUVBL1 ECP-54|ECP54|INO80H|NMP 238|NMP238|PONTIN|Pontin52|RVB1|TIH1|TIP49|TIP49A RuvB like AAA ATPase 1 protein-coding chr1-74 chr1 150487193 150487403 + 77.1 0.000 promoter-TSS (NM_025150) promoter-TSS (NM_025150) -121 NR_073513 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr16-52 chr16 29944042 29944252 + 76.9 0.000 Intergenic L2c|LINE|L2 -17921 NM_178863 253980 Hs.534590 NM_178863 ENSG00000174943 KCTD13 BACURD1|FKSG86|PDIP1|POLDIP1|hBACURD1 potassium channel tetramerization domain containing 13 protein-coding chr2-21 chr2 73233289 73233499 + 76.9 0.000 promoter-TSS (NM_032319) promoter-TSS (NM_032319) -110 NR_144358 84279 Hs.61268 NM_032319 ENSG00000135617 PRADC1 C2orf7|PAP21 protease associated domain containing 1 protein-coding chr8-13 chr8 140464434 140464644 + 76.8 0.000 Intergenic CpG -5960 NM_031466 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr19-64 chr19 44890923 44891133 + 76.8 0.000 promoter-TSS (NM_001128917) promoter-TSS (NM_001128917) -192 NM_001128916 10452 Hs.655909 NM_006114 ENSG00000130204 TOMM40 C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 translocase of outer mitochondrial membrane 40 protein-coding chr10-13 chr10 103396472 103396682 + 76.8 0.000 promoter-TSS (NM_014976) promoter-TSS (NM_014976) -49 NM_014976 22984 Hs.239499 NM_014976 ENSG00000148843 PDCD11 ALG-4|ALG4|NFBP|RRP5 programmed cell death 11 protein-coding chr15-10 chr15 40807526 40807736 + 76.8 0.000 promoter-TSS (NM_018163) promoter-TSS (NM_018163) -158 NM_018163 55192 Hs.511069 NM_018163 ENSG00000104129 DNAJC17 - DnaJ heat shock protein family (Hsp40) member C17 protein-coding chr17-46 chr17 75855404 75855614 + 76.6 0.000 promoter-TSS (NM_001330499) promoter-TSS (NM_001330499) -174 NM_012478 23558 Hs.514489 NM_012478 ENSG00000132471 WBP2 DFNB107|GRAMD6|WBP-2 WW domain binding protein 2 protein-coding chr1-31 chr1 228139998 228140208 + 76.6 0.000 promoter-TSS (NM_001242839) promoter-TSS (NM_001242839) 19 NM_001242839 2987 Hs.376933 NM_000858 ENSG00000143774 GUK1 GMK guanylate kinase 1 protein-coding chr8-14 chr8 144104276 144104486 + 76.6 0.000 promoter-TSS (NM_030974) promoter-TSS (NM_030974) -80 NM_032272 84232 Hs.19673 NM_032272 ENSG00000179632 MAF1 - MAF1 homolog, negative regulator of RNA polymerase III protein-coding chr11-46 chr11 797311 797521 + 76.5 0.000 promoter-TSS (NM_001293167) promoter-TSS (NM_001293167) -95 NM_001293167 101927423 Hs.99486 NM_001293167 ENSG00000274897 PANO1 PANO proapoptotic nucleolar protein 1 protein-coding chr1-99 chr1 154974412 154974622 + 76.5 0.000 promoter-TSS (NM_001826) promoter-TSS (NM_001826) -125 NR_024163 1163 Hs.374378 NM_001826 ENSG00000173207 CKS1B CKS1|PNAS-16|PNAS-18|ckshs1 CDC28 protein kinase regulatory subunit 1B protein-coding chr5-16 chr5 140401535 140401745 + 76.5 0.000 promoter-TSS (NM_017978) promoter-TSS (NM_017978) -174 NM_020690 404734 Hs.594084 NM_020690 ENSG00000254996 ANKHD1-EIF4EBP3 MASK-BP3|MASK-BP3ARF ANKHD1-EIF4EBP3 readthrough protein-coding chr17-26 chr17 78840712 78840922 + 76.4 0.000 promoter-TSS (NM_001321291) promoter-TSS (NM_001321291) -290 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr2-46 chr2 1675690 1675900 + 76.4 0.000 intron (NM_012293, intron 8 of 22) intron (NM_012293, intron 8 of 22) 68720 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr11-70 chr11 129846469 129846679 + 76.2 0.000 intron (NM_001331210, intron 2 of 6) L2a|LINE|L2 30726 NM_138788 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr16-33 chr16 72008550 72008760 + 76.2 0.000 promoter-TSS (NM_001361) promoter-TSS (NM_001361) -89 NM_001361 1723 Hs.654427 NM_001361 ENSG00000102967 DHODH DHOdehase|POADS|URA1 dihydroorotate dehydrogenase (quinone) protein-coding chr1-42 chr1 113390070 113390280 + 76.2 0.000 promoter-TSS (NM_152900) promoter-TSS (NM_152900) -340 NM_001142782 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr2-13 chr2 64751210 64751420 + 76.2 0.000 Intergenic CpG -97402 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr4-26 chr4 173334454 173334664 + 76.1 0.000 promoter-TSS (NM_001130689) promoter-TSS (NM_001130689) -201 NM_002129 3148 Hs.434953 NM_002129 ENSG00000164104 HMGB2 HMG2 high mobility group box 2 protein-coding chr19-66 chr19 56140814 56141024 + 76.0 0.000 promoter-TSS (NM_001253792) promoter-TSS (NM_001253792) -368 NM_001253792 55311 Hs.24545 NM_018337 ENSG00000167685 ZNF444 EZF-2|EZF2|ZSCAN17 zinc finger protein 444 protein-coding chr19-61 chr19 37370885 37371095 + 75.9 0.000 promoter-TSS (NM_032453) promoter-TSS (NM_032453) -109 NM_032453 84503 Hs.590940 NM_032453 ENSG00000189164 ZNF527 - zinc finger protein 527 protein-coding chr17-23 chr17 82003888 82004098 + 75.8 0.000 intron (NR_045351, intron 6 of 14) (GAGG)n|Simple_repeat|Simple_repeat 18885 NM_001271006 201254 Hs.37616 NM_144998 ENSG00000169689 CENPX CENP-X|D9|FAAP10|MHF2|STRA13 centromere protein X protein-coding chr1-23 chr1 54053283 54053493 + 75.8 0.000 promoter-TSS (NR_039942) promoter-TSS (NR_039942) 50 NM_001305066 9528 Hs.118947 NM_004872 ENSG00000116209 TMEM59 C1orf8|DCF1|HSPC001|PRO195|UNQ169 transmembrane protein 59 protein-coding chr3-11 chr3 38024998 38025208 + 75.8 0.000 promoter-TSS (NR_024071) promoter-TSS (NR_024071) -583 NM_001130964 5333 Hs.80776 NM_006225 ENSG00000187091 PLCD1 NDNC3|PLC-III phospholipase C delta 1 protein-coding chr11-62 chr11 65540728 65540938 + 75.8 0.000 intron (NM_001130144, intron 21 of 27) CpG-4461 15750 NM_001048218 57410 Hs.238839 NM_020680 ENSG00000142186 SCYL1 GKLP|HT019|NKTL|NTKL|P105|SCAR21|TAPK|TEIF|TRAP SCY1 like pseudokinase 1 protein-coding chr2-51 chr2 88627608 88627818 + 75.5 0.000 promoter-TSS (NR_135540) promoter-TSS (NR_135540) -116 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 EIF2AK3-DT - EIF2AK3 divergent transcript ncRNA chr12-10 chr12 122226089 122226299 + 75.5 0.000 promoter-TSS (NR_103497) promoter-TSS (NR_103497) -142 NM_001371333 chr1-83 chr1 26921554 26921764 + 75.5 0.000 promoter-TSS (NM_006600) promoter-TSS (NM_006600) -84 NM_006600 10726 Hs.263812 NM_006600 ENSG00000090273 NUDC HNUDC|MNUDC|NPD011 nuclear distribution C, dynein complex regulator protein-coding chr19-100 chr19 58401267 58401477 + 75.4 0.000 TTS (NR_149054) TTS (NR_149054) 1169 NR_149054 110806301 NR_149054 ENSG00000268307 LINC02560 - long intergenic non-protein coding RNA 2560 ncRNA chr1-110 chr1 45500051 45500261 + 75.4 0.000 promoter-TSS (NM_015506) promoter-TSS (NM_015506) -83 NM_001358407 126661 Hs.461300 NM_001102601 ENSG00000280670 CCDC163 C1orf231|CCDC163P coiled-coil domain containing 163 protein-coding chr4-13 chr4 37686518 37686728 + 75.4 0.000 promoter-TSS (NM_001085399) promoter-TSS (NM_001085399) -247 NM_001085399 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr17-71 chr17 835442 835652 + 75.4 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 28564 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr17-50 chr17 58517998 58518208 + 75.3 0.000 promoter-TSS (NM_004687) promoter-TSS (NM_004687) -223 NM_004687 9110 Hs.514373 NM_004687 ENSG00000108389 MTMR4 FYVE-DSP2|ZFYVE11 myotubularin related protein 4 protein-coding chr20-9 chr20 45812337 45812547 + 75.3 0.000 promoter-TSS (NR_104037) promoter-TSS (NR_104037) -134 NM_001281741 11065 Hs.93002 NM_007019 ENSG00000175063 UBE2C UBCH10|dJ447F3.2 ubiquitin conjugating enzyme E2 C protein-coding chr16-19 chr16 2531958 2532168 + 75.2 0.000 promoter-TSS (NR_036139) promoter-TSS (NR_036139) -58 NR_036139 100422974 NR_036139 ENSG00000266232 MIR3178 mir-3178 microRNA 3178 ncRNA chr19-67 chr19 49640282 49640492 + 75.1 0.000 promoter-TSS (NM_006270) promoter-TSS (NM_006270) -244 NM_006270 6237 Hs.515536 NM_006270 ENSG00000126458 RRAS R-Ras RAS related protein-coding chr17-65 chr17 3048943 3049153 + 75.1 0.000 Intergenic CpG 14559 NM_014566 8386 Hs.553508 NM_014566 ENSG00000262628 OR1D5 C17orf2|OR17-2|OR17-30|OR17-31|OR1D4 olfactory receptor family 1 subfamily D member 5 protein-coding chr18-1 chr18 12377275 12377485 + 74.7 0.000 promoter-TSS (NM_006796) promoter-TSS (NM_006796) -104 NM_006796 10939 Hs.726355 NM_006796 ENSG00000141385 AFG3L2 SCA28|SPAX5 AFG3 like matrix AAA peptidase subunit 2 protein-coding chr1-71 chr1 201904689 201904899 + 74.7 0.000 intron (NM_012134, intron 1 of 2) intron (NM_012134, intron 1 of 2) 16117 NM_198149 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr12-36 chr12 68332371 68332581 + 74.7 0.000 promoter-TSS (NM_020128) promoter-TSS (NM_020128) -62 NM_001354972 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr2-53 chr2 111160827 111161037 + 74.6 0.000 intron (NM_001204109, intron 3 of 3) MLT1B|LTR|ERVL-MaLR 40018 NM_138623 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr1-55 chr1 27725726 27725936 + 74.5 0.000 promoter-TSS (NM_001143912) promoter-TSS (NM_001143912) -130 NM_001143914 199870 Hs.469359 NM_152660 ENSG00000009780 FAM76A - family with sequence similarity 76 member A protein-coding chr19-89 chr19 18323076 18323286 + 74.5 0.000 promoter-TSS (NM_001252129) promoter-TSS (NM_001252129) -105 NM_012321 25804 Hs.515255 NM_012321 ENSG00000130520 LSM4 GRP|YER112W LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr3-21 chr3 11600565 11600775 + 74.5 0.000 intron (NM_001128219, intron 2 of 4) intron (NM_001128219, intron 2 of 4) 3911 NM_001284391 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr9-36 chr9 121121630 121121840 + 74.4 0.000 promoter-TSS (NM_001369892) promoter-TSS (NM_001369892) -35 NM_001330762 11064 Hs.653263 NM_007018 ENSG00000119397 CNTRL CEP1|CEP110|FAN|bA165P4.1 centriolin protein-coding chr16-51 chr16 4624519 4624729 + 74.4 0.000 promoter-TSS (NM_001142289) promoter-TSS (NM_001142289) -200 NM_001142290 23295 Hs.526494 NM_015246 ENSG00000102858 MGRN1 RNF156 mahogunin ring finger 1 protein-coding chr16-22 chr16 69330658 69330868 + 74.4 0.000 promoter-TSS (NM_022341) promoter-TSS (NM_022341) -175 NM_022341 64146 Hs.130849 NM_022341 ENSG00000258429 PDF - peptide deformylase, mitochondrial protein-coding chr1-25 chr1 6785169 6785379 + 74.2 0.000 promoter-TSS (NR_149049) promoter-TSS (NR_149049) -50 NR_146202 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr17-27 chr17 44138206 44138416 + 74.2 0.000 Intergenic Intergenic -3619 NM_001171251 78995 Hs.437059 NM_024032 ENSG00000125319 C17orf53 - chromosome 17 open reading frame 53 protein-coding chr17-51 chr17 41688674 41688884 + 74.1 0.000 promoter-TSS (NM_005801) promoter-TSS (NM_005801) -106 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding chr1-69 chr1 9303056 9303266 + 74.1 0.000 intron (NM_025106, intron 1 of 2) ERVL-int|LTR|ERVL 10267 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr2-9 chr2 241686767 241686977 + 74.0 0.000 promoter-TSS (NM_001330161) promoter-TSS (NM_001330161) -57 NM_001320905 1841 Hs.471873 NM_012145 ENSG00000168393 DTYMK CDC8|PP3731|TMPK|TYMK deoxythymidylate kinase protein-coding chr17-36 chr17 28952383 28952593 + 74.0 0.000 promoter-TSS (NM_020889) promoter-TSS (NM_020889) -970 NM_001290131 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr5-11 chr5 141969023 141969233 + 73.9 0.000 promoter-TSS (NM_004290) promoter-TSS (NM_004290) 23 NM_004290 9604 Hs.483616 NM_004290 ENSG00000013561 RNF14 ARA54|HFB30|HRIHFB2038|TRIAD2 ring finger protein 14 protein-coding chr14-42 chr14 23095213 23095423 + 73.9 0.000 promoter-TSS (NM_017924) promoter-TSS (NM_017924) -187 NM_017924 55017 Hs.525238 NM_017924 ENSG00000179933 C14orf119 - chromosome 14 open reading frame 119 protein-coding chr11-100 chr11 47004694 47004904 + 73.8 0.000 intron (NR_103472, intron 2 of 7) L2|LINE|L2 68038 NM_001003677 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr12-9 chr12 6852033 6852243 + 73.6 0.000 promoter-TSS (NM_031299) promoter-TSS (NM_031299) -12 NM_001098536 8078 Hs.631661 NM_003481 ENSG00000111667 USP5 ISOT ubiquitin specific peptidase 5 protein-coding chr12-20 chr12 53379852 53380062 + 73.5 0.000 promoter-TSS (NM_001251825) promoter-TSS (NM_001251825) -219 NM_001251825 6667 Hs.620754 NM_003109 ENSG00000185591 SP1 - Sp1 transcription factor protein-coding chr16-59 chr16 18801543 18801753 + 73.5 0.000 promoter-TSS (NM_001313858) promoter-TSS (NM_001313858) -99 NM_015161 23204 Hs.634882 NM_015161 ENSG00000170540 ARL6IP1 AIP1|ARL6IP|ARMER|SPG61 ADP ribosylation factor like GTPase 6 interacting protein 1 protein-coding chr17-56 chr17 7572480 7572690 + 73.5 0.000 promoter-TSS (NM_001416) promoter-TSS (NM_001416) -240 NM_001204510 1973 Hs.129673 NM_001416 ENSG00000161960 EIF4A1 DDX2A|EIF-4A|EIF4A|eIF-4A-I|eIF4A-I eukaryotic translation initiation factor 4A1 protein-coding chr7-28 chr7 100148698 100148908 + 73.4 0.000 promoter-TSS (NR_134526) promoter-TSS (NR_134526) -115 NM_001318236 389541 Hs.406520 NM_001008395 ENSG00000188186 LAMTOR4 C7orf59 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding chr5-8 chr5 69166955 69167165 + 73.3 0.000 promoter-TSS (NM_031966) promoter-TSS (NM_031966) 50 NM_001354845 891 Hs.23960 NM_031966 ENSG00000134057 CCNB1 CCNB cyclin B1 protein-coding chr8-4 chr8 144827331 144827541 + 73.3 0.000 promoter-TSS (NM_001349806) promoter-TSS (NM_001349806) -82 NM_001282797 7553 Hs.493218 NM_003416 ENSG00000147789 ZNF7 HF.16|KOX4|zf30 zinc finger protein 7 protein-coding chr15-8 chr15 75661112 75661322 + 73.2 0.000 Intergenic Intergenic 12210 NM_001318146 257364 Hs.8705 NM_153271 ENSG00000173548 SNX33 SH3PX3|SH3PXD3C|SNX30 sorting nexin 33 protein-coding chr14-17 chr14 51240059 51240269 + 73.2 0.000 promoter-TSS (NM_030755) promoter-TSS (NM_030755) -83 NM_030755 81542 Hs.125221 NM_030755 ENSG00000139921 TMX1 PDIA11|TMX|TXNDC|TXNDC1 thioredoxin related transmembrane protein 1 protein-coding chr3-19 chr3 136861987 136862197 + 73.1 0.000 promoter-TSS (NM_006153) promoter-TSS (NM_006153) -29 NR_110175 101927597 Hs.559587 NR_110175 NCK1-DT NCK1-AS1|SLC35G2-AS1 NCK1 divergent transcript ncRNA chr21-2 chr21 8219902 8220112 + 73.1 0.000 TTS (NR_146144) TTS (NR_146144) 6119 NR_003287 100008589 NR_003287 RNA28SN5 RN28S1|RNA28S5 RNA, 28S ribosomal N5 rRNA chr20-5 chr20 3889129 3889339 + 72.9 0.000 promoter-TSS (NM_001324191) promoter-TSS (NM_001324191) -153 NR_136715 80025 Hs.114180 NM_024960 ENSG00000125779 PANK2 C20orf48|HARP|HSS|NBIA1|PKAN pantothenate kinase 2 protein-coding chr13-10 chr13 95676848 95677058 + 72.8 0.000 promoter-TSS (NR_132117) promoter-TSS (NR_132117) -28 NR_132117 100289274 Hs.594844 NR_132117 ENSG00000247400 DNAJC3-DT DNAJC3-AS1 DNAJC3 divergent transcript ncRNA chr15-24 chr15 74873112 74873322 + 72.8 0.000 exon (NM_005697, exon 1 of 9) exon (NM_005697, exon 1 of 9) 148 NM_005697 10066 Hs.458917 NM_005697 ENSG00000140497 SCAMP2 - secretory carrier membrane protein 2 protein-coding chr17-43 chr17 76265004 76265214 + 72.6 0.000 promoter-TSS (NM_182565) promoter-TSS (NM_182565) -239 NM_182565 283991 Hs.744981 NM_182565 ENSG00000185262 UBALD2 FAM100B UBA like domain containing 2 protein-coding chr3-25 chr3 50292403 50292613 + 72.6 0.000 promoter-TSS (NM_006764) promoter-TSS (NM_006764) 87 NM_006764 7866 Hs.315177 NM_006764 ENSG00000214706 IFRD2 IFNRP|SKMc15|SM15 interferon related developmental regulator 2 protein-coding chr19-93 chr19 36115269 36115479 + 72.5 0.000 promoter-TSS (NM_006233) promoter-TSS (NM_006233) -94 NM_001281 1155 Hs.31053 NM_001281 ENSG00000105254 TBCB CG22|CKAP1|CKAPI tubulin folding cofactor B protein-coding chr12-31 chr12 109573546 109573756 + 72.5 0.000 promoter-TSS (NM_001114185) promoter-TSS (NM_001114185) -143 NM_001114185 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr10-43 chr10 125061017 125061227 + 72.3 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -28252 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr14-28 chr14 102524710 102524920 + 72.3 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -14829 NR_036192 100422954 NR_036192 ENSG00000266015 MIR4309 - microRNA 4309 ncRNA chr9-41 chr9 127562000 127562210 + 72.2 0.000 intron (NM_001035534, intron 1 of 13) intron (NM_001035534, intron 1 of 13) 6968 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr1-80 chr1 150163176 150163386 + 72.2 0.000 intron (NR_135098, intron 1 of 3) intron (NR_135098, intron 1 of 3) 2553 NR_135098 105371433 Hs.599366 NR_135098 LOC105371433 - uncharacterized LOC105371433 ncRNA chr17-60 chr17 59707442 59707652 + 72.1 0.000 promoter-TSS (NM_001329399) promoter-TSS (NM_001329399) 51 NM_001015509 51651 Hs.12677 NM_016077 ENSG00000141378 PTRH2 BIT1|CFAP37|CGI-147|IMNEPD|PTH|PTH 2|PTH2 peptidyl-tRNA hydrolase 2 protein-coding chr7-49 chr7 72828155 72828365 + 72.1 0.000 promoter-TSS (NM_001145440) promoter-TSS (NM_001145440) -60 NM_001145440 441250 Hs.488614 NM_001145440 ENSG00000277149 TYW1B LINC00069|NCRNA00069|RSAFD2 tRNA-yW synthesizing protein 1 homolog B protein-coding chr9-19 chr9 127245213 127245423 + 72.0 0.000 Intergenic CpG -18344 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr17-37 chr17 28318929 28319139 + 72.0 0.000 promoter-TSS (NM_014573) promoter-TSS (NM_014573) -166 NM_014573 27346 Hs.199695 NM_014573 ENSG00000109084 TMEM97 MAC30 transmembrane protein 97 protein-coding chr14-26 chr14 21476967 21477177 + 72.0 0.000 promoter-TSS (NM_032846) promoter-TSS (NM_032846) -113 NR_028074 84932 Hs.22399 NM_032846 ENSG00000129472 RAB2B - RAB2B, member RAS oncogene family protein-coding chr7-38 chr7 151057953 151058163 + 71.9 0.000 promoter-TSS (NM_001164410) promoter-TSS (NM_001164410) -142 NM_001199692 6522 Hs.647069 NM_003040 ENSG00000164889 SLC4A2 AE2|BND3L|EPB3L1|HKB3|NBND3 solute carrier family 4 member 2 protein-coding chr15-5 chr15 76931564 76931774 + 71.9 0.000 promoter-TSS (NM_002902) promoter-TSS (NM_002902) -80 NM_002902 5955 Hs.79088 NM_002902 ENSG00000117906 RCN2 E6BP|ERC-55|ERC55|TCBP49 reticulocalbin 2 protein-coding chr7-30 chr7 2844425 2844635 + 71.9 0.000 promoter-TSS (NM_007353) promoter-TSS (NM_007353) -222 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr19-53 chr19 1205553 1205763 + 71.9 0.000 promoter-TSS (NM_000455) promoter-TSS (NM_000455) -141 NM_000455 6794 Hs.515005 NM_000455 ENSG00000118046 STK11 LKB1|PJS|hLKB1 serine/threonine kinase 11 protein-coding chr4-19 chr4 82284950 82285160 + 71.8 0.000 Intergenic CpG 88936 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chrX-2 chrX 47650704 47650914 + 71.8 0.000 promoter-TSS (NM_001114123) promoter-TSS (NM_001114123) -205 NM_001257168 2002 Hs.181128 NM_005229 ENSG00000126767 ELK1 - ETS transcription factor ELK1 protein-coding chr3-61 chr3 101724642 101724852 + 71.6 0.000 intron (NM_024548, intron 1 of 10) CpG 133 NM_001303401 79598 Hs.444135 NM_024548 ENSG00000182504 CEP97 2810403B08Rik|LRRIQ2 centrosomal protein 97 protein-coding chr16-41 chr16 30748179 30748389 + 71.6 0.000 promoter-TSS (NM_000294) promoter-TSS (NM_000294) -15 NM_001172432 5261 Hs.65735 NM_000294 ENSG00000156873 PHKG2 GSD9C phosphorylase kinase catalytic subunit gamma 2 protein-coding chr9-35 chr9 35732391 35732601 + 71.6 0.000 promoter-TSS (NM_006368) promoter-TSS (NM_006368) -170 NM_006368 10488 Hs.522110 NM_006368 ENSG00000107175 CREB3 LUMAN|LZIP|sLZIP cAMP responsive element binding protein 3 protein-coding chr19-113 chr19 3971159 3971369 + 71.6 0.000 promoter-TSS (NM_001348) promoter-TSS (NM_001348) -165 NM_001348 1613 Hs.631844 NM_001348 ENSG00000167657 DAPK3 DLK|ZIP|ZIPK death associated protein kinase 3 protein-coding chr18-5 chr18 12991123 12991333 + 71.5 0.000 promoter-TSS (NM_032142) promoter-TSS (NM_032142) -134 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr10-20 chr10 79266826 79267036 + 71.5 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -80538 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr12-32 chr12 113221144 113221354 + 71.4 0.000 promoter-TSS (NM_001351346) promoter-TSS (NM_001351346) -155 NM_138451 115811 Hs.568276 NM_138451 ENSG00000166578 IQCD 4933433C09Rik|CFAP84|DRC10 IQ motif containing D protein-coding chr8-15 chr8 144147794 144148004 + 71.4 0.000 promoter-TSS (NM_032450) promoter-TSS (NM_032450) -117 NM_001099281 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr22-17 chr22 46296689 46296899 + 71.3 0.000 promoter-TSS (NM_016426) promoter-TSS (NM_016426) -76 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding chr5-65 chr5 138178746 138178956 + 71.3 0.000 promoter-TSS (NM_001300962) promoter-TSS (NM_001300962) -182 NM_001164326 10902 Hs.519337 NM_006696 ENSG00000112983 BRD8 SMAP|SMAP2|p120 bromodomain containing 8 protein-coding chr12-26 chr12 120437888 120438098 + 71.3 0.000 promoter-TSS (NM_004373) promoter-TSS (NM_004373) -120 NM_004373 1337 Hs.369624 NM_004373 ENSG00000111775 COX6A1 CMTRID|COX6A|COX6AL cytochrome c oxidase subunit 6A1 protein-coding chr17-70 chr17 48048107 48048317 + 71.1 0.000 promoter-TSS (NM_001330261) promoter-TSS (NM_001330261) -147 NM_003204 4779 Hs.514284 NM_003204 ENSG00000082641 NFE2L1 LCR-F1|NRF1|TCF11 nuclear factor, erythroid 2 like 1 protein-coding chr11-94 chr11 64924113 64924323 + 71.1 0.000 promoter-TSS (NM_006244) promoter-TSS (NM_006244) -471 NM_006244 5526 Hs.75199 NM_006244 ENSG00000068971 PPP2R5B B56B|B56beta|PR61B protein phosphatase 2 regulatory subunit B'beta protein-coding chr3-30 chr3 121749791 121750001 + 71.1 0.000 promoter-TSS (NM_001366284) promoter-TSS (NM_001366284) -129 NM_001256488 2804 Hs.213389 NM_004487 ENSG00000173230 GOLGB1 GCP|GCP372|GOLIM1 golgin B1 protein-coding chr11-98 chr11 74748647 74748857 + 70.9 0.000 promoter-TSS (NM_001098638) promoter-TSS (NM_001098638) -97 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr22-28 chr22 46390773 46390983 + 70.9 0.000 intron (NM_014246, intron 16 of 34) MIR1_Amn|SINE|MIR 55164 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr22-10 chr22 46013526 46013736 + 70.9 0.000 Intergenic Intergenic 7015 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo chr11-80 chr11 76444714 76444924 + 70.9 0.000 promoter-TSS (NM_001300943) promoter-TSS (NM_001300943) -199 NM_001300943 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding chr3-39 chr3 186570400 186570610 + 70.7 0.000 promoter-TSS (NM_016306) promoter-TSS (NM_016306) 38 NM_001134415 55171 Hs.518469 NM_018138 ENSG00000113838 TBCCD1 - TBCC domain containing 1 protein-coding chr3-81 chr3 142976671 142976881 + 70.7 0.000 intron (NR_125393, intron 2 of 4) intron (NR_125393, intron 2 of 4) 12718 NR_125393 101927832 Hs.710007 NR_125393 ENSG00000241570 PAQR9-AS1 - PAQR9 antisense RNA 1 ncRNA chr10-19 chr10 27504044 27504254 + 70.6 0.000 promoter-TSS (NR_046172) promoter-TSS (NR_046172) -25 NM_001256412 22931 Hs.406799 NM_021252 ENSG00000099246 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding chr1-57 chr1 170074580 170074790 + 70.6 0.000 promoter-TSS (NM_001204514) promoter-TSS (NM_001204514) 10 NM_014970 22920 Hs.433442 NM_014970 ENSG00000075945 KIFAP3 FLA3|KAP-1|KAP-3|KAP3|SMAP|Smg-GDS|dJ190I16.1 kinesin associated protein 3 protein-coding chr9-52 chr9 133076043 133076253 + 70.5 0.000 Intergenic LTR61|LTR|ERV1 -6391 NR_001275 1057 Hs.654361 NR_001275 ENSG00000170827 CELP CELL|cell1|cell2|cell3 carboxyl ester lipase pseudogene pseudo chr19-119 chr19 1438160 1438370 + 70.5 0.000 promoter-TSS (NM_001018) promoter-TSS (NM_001018) -99 NM_001018 6209 Hs.406683 NM_001018 ENSG00000115268 RPS15 RIG|S15 ribosomal protein S15 protein-coding chr1-58 chr1 1375296 1375506 + 70.3 0.000 promoter-TSS (NM_017900) promoter-TSS (NM_017900) -194 NM_017900 54998 Hs.632515 NM_017900 ENSG00000175756 AURKAIP1 AIP|AKIP|MRP-S38 aurora kinase A interacting protein 1 protein-coding chr1-17 chr1 2412594 2412804 + 70.3 0.000 promoter-TSS (NM_002617) promoter-TSS (NM_002617) -128 NM_153818 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr15-19 chr15 75454079 75454289 + 70.2 0.000 intron (NM_001145357, intron 1 of 20) CpG-8441 1631 NM_001145357 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding chr11-53 chr11 796257 796467 + 70.2 0.000 promoter-TSS (NM_024698) promoter-TSS (NM_024698) -124 NM_024698 79751 Hs.99486 NM_024698 ENSG00000177542 SLC25A22 EIEE3|GC-1|GC1|NET44 solute carrier family 25 member 22 protein-coding chr12-41 chr12 123043574 123043784 + 70.1 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) -32951 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chr14-21 chr14 81533934 81534144 + 70.0 0.000 promoter-TSS (NM_001244984) promoter-TSS (NM_001244984) -178 NM_001244984 6400 Hs.181300 NM_005065 ENSG00000071537 SEL1L Hrd3|PRO1063|SEL1-LIKE|SEL1L1 SEL1L adaptor subunit of ERAD E3 ubiquitin ligase protein-coding chr10-31 chr10 104232305 104232515 + 69.9 0.000 promoter-TSS (NM_025145) promoter-TSS (NM_025145) -33 NM_025145 80217 Hs.288927 NM_025145 ENSG00000197748 CFAP43 C10orf79|SPGF19|WDR96|bA373N18.2 cilia and flagella associated protein 43 protein-coding chr5-41 chr5 34053208 34053418 + 69.8 0.000 intron (NR_146599, intron 7 of 11) intron (NR_146599, intron 7 of 11) -10100 NM_181435 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr1-45 chr1 6199562 6199772 + 69.8 0.000 promoter-TSS (NM_000983) promoter-TSS (NM_000983) -72 NM_000983 6146 Hs.515329 NM_000983 ENSG00000116251 RPL22 EAP|HBP15|HBP15/L22|L22 ribosomal protein L22 protein-coding chr6-33 chr6 138465065 138465275 + 69.8 0.000 intron (NM_020464, intron 3 of 6) Tigger3c|DNA|TcMar-Tigger -29876 NR_036099 100423001 NR_036099 ENSG00000266555 MIR3145 mir-3145 microRNA 3145 ncRNA chr9-39 chr9 136326214 136326424 + 69.6 0.000 non-coding (NR_026964, exon 1 of 1) non-coding (NR_026964, exon 1 of 1) 1004 NR_026964 26102 Hs.561893 NR_026964 ENSG00000262075 DKFZP434A062 - uncharacterized LOC26102 ncRNA chr18-2 chr18 32470833 32471043 + 69.6 0.000 promoter-TSS (NM_022751) promoter-TSS (NM_022751) -56 NM_022751 64762 Hs.444314 NM_022751 ENSG00000141441 GAREM1 C18orf11|FAM59A|GAREM|Gm944 GRB2 associated regulator of MAPK1 subtype 1 protein-coding chr16-69 chr16 57735516 57735726 + 69.5 0.000 promoter-TSS (NM_005886) promoter-TSS (NM_005886) -149 NM_005886 10300 Hs.275675 NM_005886 ENSG00000140854 KATNB1 KAT|LIS6 katanin regulatory subunit B1 protein-coding chr12-25 chr12 133080128 133080338 + 69.5 0.000 promoter-TSS (NM_001300776) promoter-TSS (NM_001300776) 30 NM_001300778 7699 Hs.181552 NM_003440 ENSG00000196387 ZNF140 pHZ-39 zinc finger protein 140 protein-coding chr3-14 chr3 186109114 186109324 + 69.5 0.000 promoter-TSS (NM_004454) promoter-TSS (NM_004454) -130 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr14-39 chr14 61762217 61762427 + 69.5 0.000 promoter-TSS (NM_003082) promoter-TSS (NM_003082) -98 NM_003082 6617 Hs.179312 NM_003082 ENSG00000023608 SNAPC1 PTFgamma|SNAP43 small nuclear RNA activating complex polypeptide 1 protein-coding chr10-40 chr10 102502803 102503013 + 69.5 0.000 promoter-TSS (NM_005736) promoter-TSS (NM_005736) -196 NM_005736 10121 Hs.153961 NM_005736 ENSG00000138107 ACTR1A ARP1|Arp1A|CTRN1 actin related protein 1A protein-coding chr9-112 chr9 125233738 125233948 + 69.5 0.000 exon (NM_005833, exon 8 of 8) exon (NM_005833, exon 8 of 8) 7500 NM_005347 3309 Hs.743241 NM_005347 ENSG00000044574 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock protein family A (Hsp70) member 5 protein-coding chr3-73 chr3 47910881 47911091 + 69.5 0.000 intron (NM_002375, intron 8 of 18) intron (NM_002375, intron 8 of 18) 61431 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr5-21 chr5 123423382 123423592 + 69.4 0.000 intron (NM_153223, intron 1 of 20) CpG 105 NM_153223 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr12-54 chr12 1625454 1625664 + 69.4 0.000 intron (NM_030775, intron 1 of 4) intron (NM_030775, intron 1 of 4) -3672 NM_032642 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr9-23 chr9 129028430 129028640 + 69.4 0.000 promoter-TSS (NM_001369913) promoter-TSS (NM_001369913) -182 NM_001287045 56904 Hs.460238 NM_020145 ENSG00000148341 SH3GLB2 PP6569|PP9455|RRIG1 SH3 domain containing GRB2 like, endophilin B2 protein-coding chr11-71 chr11 783677 783887 + 69.3 0.000 non-coding (NR_126343, exon 2 of 2) non-coding (NR_126343, exon 2 of 2) 6204 NR_126342 171391 Hs.117183 NR_046316 ENSG00000255284 LOC171391 NS3BP uncharacterized LOC171391 ncRNA chr7-22 chr7 73578689 73578899 + 69.3 0.000 promoter-TSS (NM_001362660) promoter-TSS (NM_001362660) -215 NM_001362662 26608 Hs.647044 NM_012453 ENSG00000106638 TBL2 WBSCR13|WS-betaTRP transducin beta like 2 protein-coding chr1-35 chr1 24643006 24643216 + 69.2 0.000 promoter-TSS (NR_159380) promoter-TSS (NR_159380) -191 NM_001366588 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr19-101 chr19 58544062 58544272 + 69.2 0.000 5' UTR (NM_005762, exon 1 of 17) 5' UTR (NM_005762, exon 1 of 17) 103 NM_005762 10155 Hs.467408 NM_005762 ENSG00000130726 TRIM28 KAP1|PPP1R157|RNF96|TF1B|TIF1B tripartite motif containing 28 protein-coding chr5-27 chr5 177351702 177351912 + 69.2 0.000 promoter-TSS (NM_006816) promoter-TSS (NM_006816) -139 NM_006816 10960 Hs.75864 NM_006816 ENSG00000169223 LMAN2 C5orf8|GP36B|VIP36 lectin, mannose binding 2 protein-coding chr11-153 chr11 126637858 126638068 + 69.0 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -14815 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr16-45 chr16 589677 589887 + 69.0 0.000 promoter-TSS (NM_001172665) promoter-TSS (NM_001172665) 113 NM_001172664 57799 Hs.459630 NM_021168 ENSG00000197562 RAB40C RARL|RASL8C RAB40C, member RAS oncogene family protein-coding chr22-30 chr22 21642084 21642294 + 69.0 0.000 promoter-TSS (NM_022044) promoter-TSS (NM_022044) -113 NM_022044 23753 Hs.303116 NM_022044 ENSG00000128228 SDF2L1 - stromal cell derived factor 2 like 1 protein-coding chr9-20 chr9 134707044 134707254 + 69.0 0.000 intron (NM_001278074, intron 4 of 65) intron (NM_001278074, intron 4 of 65) -54306 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr15-20 chr15 90717126 90717336 + 68.9 0.000 promoter-TSS (NM_001287248) promoter-TSS (NM_001287248) -91 NR_120372 101926895 Hs.564760 NR_120372 ENSG00000259736 CRTC3-AS1 - CRTC3 antisense RNA 1 ncRNA chr19-69 chr19 16496177 16496387 + 68.9 0.000 promoter-TSS (NM_032207) promoter-TSS (NM_032207) -90 NM_145046 125972 Hs.304020 NM_145046 ENSG00000269058 CALR3 CMH19|CRT2|CT93 calreticulin 3 protein-coding chr5-13 chr5 109410064 109410274 + 68.9 0.000 promoter-TSS (NM_014819) promoter-TSS (NM_014819) -195 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr11-59 chr11 119121374 119121584 + 68.9 0.000 promoter-TSS (NM_001351964) promoter-TSS (NM_001351964) -44 NM_001351962 25988 Hs.504091 NM_015517 ENSG00000172273 HINFP HiNF-P|MIZF|ZNF743 histone H4 transcription factor protein-coding chr2-23 chr2 96858007 96858217 + 68.9 0.000 promoter-TSS (NM_016466) promoter-TSS (NM_016466) -96 NM_016466 51239 Hs.709507 NM_016466 ENSG00000213337 ANKRD39 - ankyrin repeat domain 39 protein-coding chr3-43 chr3 46935557 46935767 + 68.9 0.000 intron (NM_144716, intron 3 of 7) intron (NM_144716, intron 3 of 7) 40839 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr12-24 chr12 49322954 49323164 + 68.9 0.000 promoter-TSS (NM_001278324) promoter-TSS (NM_001278324) -196 NM_001278324 10024 Hs.524399 NM_005480 ENSG00000135451 TROAP TASTIN trophinin associated protein protein-coding chr2-25 chr2 44168506 44168716 + 68.8 0.000 promoter-TSS (NM_002706) promoter-TSS (NM_002706) -192 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr17-94 chr17 17591590 17591800 + 68.8 0.000 promoter-TSS (NM_148172) promoter-TSS (NM_148172) 13 NM_001267552 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr1-96 chr1 109426393 109426603 + 68.8 0.000 promoter-TSS (NM_001199773) promoter-TSS (NM_001199773) -50 NM_002790 5686 Hs.485246 NM_002790 ENSG00000143106 PSMA5 PSC5|ZETA proteasome subunit alpha 5 protein-coding chr16-50 chr16 89410808 89411018 + 68.8 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) -20005 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr17-44 chr17 47895983 47896193 + 68.8 0.000 promoter-TSS (NM_003110) promoter-TSS (NM_003110) -148 NM_003110 6668 Hs.514276 NM_003110 ENSG00000167182 SP2 - Sp2 transcription factor protein-coding chr16-40 chr16 85220441 85220651 + 68.8 0.000 Intergenic Intergenic 12750 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr19-137 chr19 40285473 40285683 + 68.8 0.000 promoter-TSS (NM_001243028) promoter-TSS (NM_001243028) -233 NM_001243028 208 Hs.631535 NM_001626 ENSG00000105221 AKT2 HIHGHH|PKBB|PKBBETA|PRKBB|RAC-BETA AKT serine/threonine kinase 2 protein-coding chr12-21 chr12 8243173 8243383 + 68.8 0.000 promoter-TSS (NR_024254) promoter-TSS (NR_024254) -332 NR_024254 653113 Hs.661749 NR_024254 FAM86FP - family with sequence similarity 86, member A pseudogene pseudo chr1-73 chr1 43649983 43650193 + 68.7 0.000 promoter-TSS (NM_014663) promoter-TSS (NM_014663) -61 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr9-64 chr9 40992119 40992329 + 68.7 0.000 promoter-TSS (NR_034006) promoter-TSS (NR_034006) -37 NR_156730 100132352 Hs.231861 NR_034006 FRG1HP - FSHD region gene 1 family member H, pseudogene pseudo chr7-39 chr7 102363700 102363910 + 68.6 0.000 promoter-TSS (NR_038967) promoter-TSS (NR_038967) -56 NR_038967 100630923 Hs.406395 NR_038967 LOC100630923 - LOC100289561-PRKRIP1 readthrough ncRNA chr14-19 chr14 100417563 100417773 + 68.5 0.000 intron (NM_001350949, intron 2 of 6) intron (NM_001350949, intron 2 of 6) 41183 NM_024515 79446 Hs.497599 NM_024515 ENSG00000176473 WDR25 C14orf67 WD repeat domain 25 protein-coding chr22-25 chr22 46335449 46335659 + 68.5 0.000 promoter-TSS (NM_001282784) promoter-TSS (NM_001282784) 153 NR_104241 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr2-57 chr2 112764679 112764889 + 68.3 0.000 promoter-TSS (NM_152515) promoter-TSS (NM_152515) -175 NR_130712 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L - cytoskeleton associated protein 2 like protein-coding chr19-75 chr19 680702 680912 + 68.3 0.000 intron (NM_005860, intron 3 of 4) intron (NM_005860, intron 3 of 4) 4415 NM_005860 10272 Hs.529038 NM_005860 ENSG00000070404 FSTL3 FLRG|FSRP follistatin like 3 protein-coding chr1-76 chr1 202348530 202348740 + 68.3 0.000 promoter-TSS (NM_001167857) promoter-TSS (NM_001167857) -64 NM_002481 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr19-156 chr19 41263921 41264131 + 68.2 0.000 promoter-TSS (NM_001321208) promoter-TSS (NM_001321208) -346 NM_007040 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding chr3-24 chr3 50337422 50337632 + 68.2 0.000 promoter-TSS (NR_109831) promoter-TSS (NR_109831) 16 NR_109831 102060282 NR_109831 ENSG00000281358 RASSF1-AS1 ANRASSF1 RASSF1 antisense RNA 1 ncRNA chr2-70 chr2 241547234 241547444 + 68.2 0.000 intron (NR_033346, intron 1 of 1) intron (NR_033346, intron 1 of 1) -11406 NM_032515 666 Hs.293753 NM_032515 ENSG00000176720 BOK BCL2L9|BOKL BCL2 family apoptosis regulator BOK protein-coding chr11-47 chr11 71786967 71787177 + 68.2 0.000 promoter-TSS (NM_001099653) promoter-TSS (NM_001099653) -439 NM_001099653 55199 Hs.567527 NM_018172 ENSG00000158483 FAM86C1 FAM86C family with sequence similarity 86 member C1 protein-coding chr2-48 chr2 71631624 71631834 + 68.2 0.000 intron (NM_001130987, intron 41 of 55) intron (NM_001130987, intron 41 of 55) 165030 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr17-57 chr17 75046958 75047168 + 68.2 0.000 promoter-TSS (NR_110834) promoter-TSS (NR_110834) -94 NM_001003785 10476 Hs.514465 NM_006356 ENSG00000167863 ATP5PD APT5H|ATP5H|ATPQ ATP synthase peripheral stalk subunit d protein-coding chr11-74 chr11 65858201 65858411 + 68.2 0.000 promoter-TSS (NM_005507) promoter-TSS (NM_005507) -126 NM_005507 1072 Hs.170622 NM_005507 ENSG00000172757 CFL1 CFL|HEL-S-15|cofilin cofilin 1 protein-coding chr11-121 chr11 65720605 65720815 + 68.1 0.000 exon (NM_032193, exon 1 of 4) exon (NM_032193, exon 1 of 4) 228 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr6-8 chr6 20401569 20401779 + 68.1 0.000 promoter-TSS (NM_001949) promoter-TSS (NM_001949) -205 NM_001949 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chr11-60 chr11 77820804 77821014 + 68.0 0.000 promoter-TSS (NM_001316960) promoter-TSS (NM_001316960) -75 NM_016578 51773 Hs.420229 NM_016578 ENSG00000048649 RSF1 HBXAP|RSF-1|XAP8|p325 remodeling and spacing factor 1 protein-coding chr3-15 chr3 43622180 43622390 + 67.9 0.000 promoter-TSS (NM_001346467) promoter-TSS (NM_001346467) -208 NM_001204831 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr19-84 chr19 17470241 17470451 + 67.9 0.000 promoter-TSS (NM_198580) promoter-TSS (NM_198580) -178 NM_198580 376497 Hs.363138 NM_198580 ENSG00000130304 SLC27A1 ACSVL5|FATP|FATP-1|FATP1 solute carrier family 27 member 1 protein-coding chr19-136 chr19 4402292 4402502 + 67.9 0.000 promoter-TSS (NM_005483) promoter-TSS (NM_005483) -243 NM_005483 10036 Hs.79018 NM_005483 ENSG00000167670 CHAF1A CAF-1|CAF1|CAF1B|CAF1P150|P150 chromatin assembly factor 1 subunit A protein-coding chr3-45 chr3 48188473 48188683 + 67.8 0.000 promoter-TSS (NM_001789) promoter-TSS (NM_001789) -161 NM_001789 993 Hs.437705 NM_001789 ENSG00000164045 CDC25A CDC25A2 cell division cycle 25A protein-coding chr11-136 chr11 129143402 129143612 + 67.8 0.000 intron (NM_001142685, intron 2 of 21) MER44C|DNA|TcMar-Tigger 48691 NM_001142685 9743 Hs.440379 NM_014715 ENSG00000134909 ARHGAP32 GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP Rho GTPase activating protein 32 protein-coding chr21-3 chr21 42974265 42974475 + 67.8 0.000 promoter-TSS (NM_001320694) promoter-TSS (NM_001320694) -140 NM_001286258 5316 Hs.431043 NM_004571 ENSG00000160199 PKNOX1 PREP1|pkonx1c PBX/knotted 1 homeobox 1 protein-coding chr3-42 chr3 134364376 134364586 + 67.6 0.000 intron (NM_001278683, intron 5 of 9) intron (NM_001278683, intron 5 of 9) 3381 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr19-105 chr19 37907043 37907253 + 67.6 0.000 promoter-TSS (NM_001291088) promoter-TSS (NM_001291088) -60 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr12-44 chr12 49110825 49111035 + 67.5 0.000 promoter-TSS (NM_001300750) promoter-TSS (NM_001300750) -30 NM_001352163 55716 Hs.272838 NM_018113 ENSG00000139636 LMBR1L LIMR limb development membrane protein 1 like protein-coding chr12-28 chr12 95473944 95474154 + 67.5 0.000 promoter-TSS (NM_001330246) promoter-TSS (NM_001330246) -103 NM_001317183 10988 Hs.444986 NM_006838 ENSG00000111142 METAP2 MAP2|MNPEP|p67eIF2 methionyl aminopeptidase 2 protein-coding chr17-85 chr17 39980570 39980780 + 67.5 0.000 promoter-TSS (NM_002809) promoter-TSS (NM_002809) -132 NM_002809 5709 Hs.12970 NM_002809 ENSG00000108344 PSMD3 P58|RPN3|S3|TSTA2 proteasome 26S subunit, non-ATPase 3 protein-coding chr19-114 chr19 37251611 37251821 + 67.4 0.000 promoter-TSS (NR_110720) promoter-TSS (NR_110720) -169 NR_110719 101927667 Hs.633102 NR_110718 ENSG00000226686 LINC01535 - long intergenic non-protein coding RNA 1535 ncRNA chr16-97 chr16 30430077 30430287 + 67.4 0.000 promoter-TSS (NR_134471) promoter-TSS (NR_134471) -152 NM_024096 79077 Hs.632191 NM_024096 ENSG00000179958 DCTPP1 CDA03|RS21C6|XTP3TPA dCTP pyrophosphatase 1 protein-coding chr7-60 chr7 105532010 105532220 + 67.3 0.000 promoter-TSS (NM_021930) promoter-TSS (NM_021930) 34 NM_001346599 60561 Hs.531388 NM_021930 ENSG00000135249 RINT1 RINT-1 RAD50 interactor 1 protein-coding chr10-16 chr10 484630 484840 + 67.3 0.000 intron (NM_014974, intron 2 of 36) intron (NM_014974, intron 2 of 36) -143829 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr22-34 chr22 29603361 29603571 + 67.3 0.000 promoter-TSS (NM_016418) promoter-TSS (NM_016418) -90 NM_016418 4771 Hs.187898 NM_000268 ENSG00000186575 NF2 ACN|BANF|SCH neurofibromin 2 protein-coding chr3-47 chr3 129440017 129440227 + 67.3 0.000 promoter-TSS (NM_003925) promoter-TSS (NM_003925) 57 NM_001276271 8930 Hs.35947 NM_003925 ENSG00000129071 MBD4 MED1 methyl-CpG binding domain 4, DNA glycosylase protein-coding chr9-31 chr9 134662042 134662252 + 67.3 0.000 intron (NM_001278074, intron 1 of 65) (A)n|Simple_repeat|Simple_repeat -9304 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr1-33 chr1 1116162 1116372 + 67.3 0.000 promoter-TSS (NM_001330306) promoter-TSS (NM_001330306) -178 NM_001330306 54991 Hs.235095 NM_017891 ENSG00000131591 C1orf159 - chromosome 1 open reading frame 159 protein-coding chr17-54 chr17 81666484 81666694 + 67.2 0.000 promoter-TSS (NM_001039842) promoter-TSS (NM_001039842) 16 NM_001039842 339229 Hs.405942 NM_001039842 ENSG00000204237 OXLD1 C17orf90 oxidoreductase like domain containing 1 protein-coding chr10-18 chr10 28303051 28303261 + 67.2 0.000 promoter-TSS (NM_001318170) promoter-TSS (NM_001318170) -92 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr19-88 chr19 18192952 18193162 + 67.2 0.000 promoter-TSS (NM_032683) promoter-TSS (NM_032683) -161 NM_032683 84769 Hs.515254 NM_032683 ENSG00000254858 MPV17L2 FKSG24 MPV17 mitochondrial inner membrane protein like 2 protein-coding chr17-48 chr17 82241537 82241747 + 67.2 0.000 intron (NM_001363749, intron 8 of 8) intron (NM_001363749, intron 8 of 8) 4974 NR_106845 102465472 NR_106845 ENSG00000284574 MIR6787 hsa-mir-6787 microRNA 6787 ncRNA chr3-35 chr3 50264575 50264785 + 67.0 0.000 Intergenic Intergenic 2691 NR_110702 101928931 Hs.587216 NR_110702 ENSG00000232352 SEMA3B-AS1 - SEMA3B antisense RNA 1 (head to head) ncRNA chr5-14 chr5 141923812 141924022 + 67.0 0.000 promoter-TSS (NM_001142603) promoter-TSS (NM_001142603) 46 NM_014773 9812 Hs.210532 NM_014773 ENSG00000081791 DELE1 DELE|KIAA0141 DAP3 binding cell death enhancer 1 protein-coding chr3-52 chr3 57597545 57597755 + 66.9 0.000 promoter-TSS (NR_132369) promoter-TSS (NR_132369) -139 NR_132370 106144532 Hs.667207 NR_132369 ENSG00000272146 ARF4-AS1 - ARF4 antisense RNA 1 ncRNA chr14-29 chr14 39174973 39175183 + 66.9 0.000 promoter-TSS (NM_002687) promoter-TSS (NM_002687) -176 NM_002687 5411 Hs.409965 NM_002687 ENSG00000100941 PNN DRS|DRSP|SDK3|memA pinin, desmosome associated protein protein-coding chr19-70 chr19 58362488 58362698 + 66.8 0.000 promoter-TSS (NR_136527) promoter-TSS (NR_136527) -33 NR_136527 105372483 Hs.616656 NR_136527 ENSG00000269054 LOC105372483 - uncharacterized LOC105372483 ncRNA chr15-22 chr15 44537029 44537239 + 66.8 0.000 promoter-TSS (NM_003758) promoter-TSS (NM_003758) -13 NM_003758 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr16-65 chr16 30658094 30658304 + 66.7 0.000 promoter-TSS (NM_001105079) promoter-TSS (NM_001105079) -232 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding chr19-82 chr19 56121428 56121638 + 66.7 0.000 promoter-TSS (NM_001351682) promoter-TSS (NM_001351682) -238 NM_001002836 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr11-85 chr11 45917918 45918128 + 66.7 0.000 promoter-TSS (NM_057174) promoter-TSS (NM_057174) 100 NM_057174 9409 Hs.100915 NM_004813 ENSG00000121680 PEX16 PBD8A|PBD8B peroxisomal biogenesis factor 16 protein-coding chr14-23 chr14 21269550 21269760 + 66.7 0.000 promoter-TSS (NM_001077443) promoter-TSS (NM_001077443) -176 NM_004500 3183 Hs.508848 NM_004500 ENSG00000092199 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding chr5-17 chr5 150758556 150758766 + 66.7 0.000 promoter-TSS (NM_001135644) promoter-TSS (NM_001135644) -141 NM_001135644 51164 Hs.675564 NM_016221 ENSG00000132912 DCTN4 DYN4|P62 dynactin subunit 4 protein-coding chr7-54 chr7 134316883 134317093 + 66.7 0.000 promoter-TSS (NM_032826) promoter-TSS (NM_032826) -58 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr13-9 chr13 28718915 28719125 + 66.7 0.000 promoter-TSS (NM_181785) promoter-TSS (NM_181785) -7 NM_001347960 283537 Hs.117167 NM_181785 ENSG00000139508 SLC46A3 FKSG16 solute carrier family 46 member 3 protein-coding chr19-146 chr19 36214861 36215071 + 66.6 0.000 promoter-TSS (NM_152477) promoter-TSS (NM_152477) 118 NM_001042474 147929 Hs.596338 NM_152477 ENSG00000196357 ZNF565 - zinc finger protein 565 protein-coding chr5-19 chr5 131635343 131635553 + 66.6 0.000 promoter-TSS (NM_001164386) promoter-TSS (NM_001164386) -219 NM_001164387 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr22-51 chr22 30423924 30424134 + 66.6 0.000 3' UTR (NM_012429, exon 12 of 12) 3' UTR (NM_012429, exon 12 of 12) -1739 NM_001003704 51537 Hs.713636 NM_016498 ENSG00000242114 MTFP1 HSPC242|MTP18 mitochondrial fission process 1 protein-coding KZ208915.1-1 KZ208915.1 5632016 5632226 + 66.5 0.000 NA NA NA NA chr19-87 chr19 5686926 5687136 + 66.5 0.000 intron (NM_001267869, intron 3 of 5) CpG-13469 -3264 NM_033643 25873 Hs.408018 NM_015414 ENSG00000130255 RPL36 L36 ribosomal protein L36 protein-coding chr7-41 chr7 104945048 104945258 + 66.5 0.000 Intergenic Intergenic -18508 NR_027374 723809 Hs.124316 NR_027374 ENSG00000225329 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA chr17-58 chr17 13018051 13018261 + 66.5 0.000 promoter-TSS (NM_018127) promoter-TSS (NM_018127) -92 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr9-58 chr9 33473926 33474136 + 66.5 0.000 promoter-TSS (NM_022917) promoter-TSS (NM_022917) -88 NM_139235 65083 Hs.493709 NM_022917 ENSG00000165271 NOL6 NRAP|UTP22|bA311H10.1 nucleolar protein 6 protein-coding chr19-122 chr19 507226 507436 + 66.3 0.000 promoter-TSS (NM_033513) promoter-TSS (NM_033513) -166 NM_033513 91978 Hs.369613 NM_033513 ENSG00000141933 TPGS1 C19orf20|GTRGEO22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding chr3-51 chr3 194769215 194769425 + 66.3 0.000 promoter-TSS (NR_146990) promoter-TSS (NR_146990) -611 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr16-112 chr16 29815899 29816109 + 66.3 0.000 promoter-TSS (NM_024516) promoter-TSS (NM_024516) -148 NM_024516 79447 Hs.702841 NM_024516 ENSG00000280789 PAGR1 C16orf53|GAS|PA1 PAXIP1 associated glutamate rich protein 1 protein-coding chr19-145 chr19 10835685 10835895 + 66.3 0.000 promoter-TSS (NR_104015) promoter-TSS (NR_104015) -50 NR_104015 11018 Hs.211463 NM_006858 ENSG00000099203 TMED1 IL1RL1LG|Il1rl1l|Tp24|p24g1 transmembrane p24 trafficking protein 1 protein-coding chr19-104 chr19 35757886 35758096 + 66.2 0.000 promoter-TSS (NM_001367856) promoter-TSS (NM_001367856) -185 NM_001039887 148137 Hs.527982 NM_144692 ENSG00000167595 PROSER3 C19orf55 proline and serine rich 3 protein-coding chr9-72 chr9 34329257 34329467 + 66.2 0.000 promoter-TSS (NM_001244390) promoter-TSS (NM_001244390) -94 NM_194313 347240 Hs.710246 NM_194313 ENSG00000186638 KIF24 C9orf48|bA571F15.4 kinesin family member 24 protein-coding chr19-74 chr19 2151691 2151901 + 66.1 0.000 promoter-TSS (NM_001261826) promoter-TSS (NM_001261826) -230 NM_001261826 8943 Hs.512815 NM_003938 ENSG00000065000 AP3D1 ADTD|HPS10|hBLVR adaptor related protein complex 3 subunit delta 1 protein-coding chr1-66 chr1 246566294 246566504 + 66.1 0.000 promoter-TSS (NM_001139459) promoter-TSS (NM_001139459) -57 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding chr12-68 chr12 56128013 56128223 + 66.1 0.000 promoter-TSS (NM_015292) promoter-TSS (NM_015292) -84 NM_015292 23344 Hs.632729 NM_015292 ENSG00000139641 ESYT1 FAM62A|MBC2 extended synaptotagmin 1 protein-coding chr22-38 chr22 41448478 41448688 + 66.1 0.000 Intergenic Intergenic -1782 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding chr19-120 chr19 12938379 12938589 + 66.1 0.000 promoter-TSS (NM_004343) promoter-TSS (NM_004343) -116 NM_004343 811 Hs.515162 NM_004343 ENSG00000179218 CALR CRT|HEL-S-99n|RO|SSA|cC1qR calreticulin protein-coding chr9-18 chr9 133874254 133874464 + 66.0 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 117965 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr1-63 chr1 92785080 92785290 + 65.9 0.000 promoter-TSS (NM_001350197) promoter-TSS (NM_001350197) -77 NM_001350198 7813 Hs.594434 NM_005665 ENSG00000067208 EVI5 EVI-5|NB4S ecotropic viral integration site 5 protein-coding chr17-76 chr17 49789073 49789283 + 65.9 0.000 intron (NM_007067, intron 1 of 14) CpG 497 NM_001199157 11143 Hs.21907 NM_007067 ENSG00000136504 KAT7 HBO1|HBOA|MYST2|ZC2HC7 lysine acetyltransferase 7 protein-coding chr19-62 chr19 23250348 23250558 + 65.9 0.000 promoter-TSS (NM_001355406) promoter-TSS (NM_001355406) -59 NM_001355405 440519 Hs.675814 NM_001355404 ENSG00000196081 ZNF724 ZNF724P zinc finger protein 724 protein-coding chr19-52 chr19 1905288 1905498 + 65.9 0.000 promoter-TSS (NM_001329533) promoter-TSS (NM_001329533) -6 NM_079834 113178 Hs.144980 NM_079834 ENSG00000227500 SCAMP4 SCAMP-4 secretory carrier membrane protein 4 protein-coding chr19-91 chr19 7943745 7943955 + 65.9 0.000 promoter-TSS (NM_006351) promoter-TSS (NM_006351) -184 NM_006351 10469 Hs.465784 NM_006351 ENSG00000104980 TIMM44 TIM44 translocase of inner mitochondrial membrane 44 protein-coding chr17-78 chr17 63550176 63550386 + 65.7 0.000 promoter-TSS (NM_005828) promoter-TSS (NM_005828) -196 NR_073585 10238 Hs.410596 NM_005828 ENSG00000136485 DCAF7 AN11|HAN11|SWAN-1|WDR68 DDB1 and CUL4 associated factor 7 protein-coding chr12-37 chr12 57078855 57079065 + 65.7 0.000 promoter-TSS (NM_015257) promoter-TSS (NM_015257) -169 NM_001130963 23306 Hs.591040 NM_015257 ENSG00000166881 NEMP1 TMEM194|TMEM194A nuclear envelope integral membrane protein 1 protein-coding chr2-24 chr2 231464493 231464703 + 65.7 0.000 promoter-TSS (NM_005381) promoter-TSS (NM_005381) -114 NM_005381 4691 Hs.79110 NM_005381 ENSG00000115053 NCL C23|Nsr1 nucleolin protein-coding chr15-12 chr15 72272696 72272906 + 65.7 0.000 promoter-TSS (NR_136610) promoter-TSS (NR_136610) -247 NR_136606 56965 Hs.270244 NM_020213 ENSG00000137817 PARP6 ARTD17|PARP-6-B1|PARP-6-C|pART17 poly(ADP-ribose) polymerase family member 6 protein-coding chr19-73 chr19 1095386 1095596 + 65.7 0.000 promoter-TSS (NM_001316324) promoter-TSS (NM_001316324) -99 NM_001316324 5434 Hs.24301 NM_002695 ENSG00000099817 POLR2E RPABC1|RPB5|XAP4|hRPB25|hsRPB5 RNA polymerase II subunit E protein-coding chr1-52 chr1 11805852 11806062 + 65.7 0.000 promoter-TSS (NR_046428) promoter-TSS (NR_046428) -139 NR_046428 1185 Hs.193043 NM_001286 ENSG00000011021 CLCN6 CLC-6 chloride voltage-gated channel 6 protein-coding chr19-116 chr19 17267205 17267415 + 65.7 0.000 promoter-TSS (NM_014173) promoter-TSS (NM_014173) -66 NM_001288757 29086 Hs.190722 NM_014173 ENSG00000105393 BABAM1 C19orf62|HSPC142|MERIT40|NBA1 BRISC and BRCA1 A complex member 1 protein-coding chr5-28 chr5 41904123 41904333 + 65.6 0.000 promoter-TSS (NM_175921) promoter-TSS (NM_175921) -116 NM_175921 285636 Hs.29899 NM_175921 ENSG00000205765 C5orf51 - chromosome 5 open reading frame 51 protein-coding chr1-47 chr1 44674233 44674443 + 65.6 0.000 promoter-TSS (NM_001145636) promoter-TSS (NM_001145636) 143 NM_024587 79639 Hs.22157 NM_024587 ENSG00000126106 TMEM53 NET4 transmembrane protein 53 protein-coding chr14-38 chr14 23469399 23469609 + 65.6 0.000 promoter-TSS (NM_015514) promoter-TSS (NM_015514) -199 NM_015514 25983 Hs.9043 NM_015514 ENSG00000129460 NGDN C14orf120|CANu1|LCP5|NGD|lpd-2 neuroguidin protein-coding chr3-33 chr3 66998124 66998334 + 65.6 0.000 promoter-TSS (NM_032505) promoter-TSS (NM_032505) -78 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr17-55 chr17 42609462 42609672 + 65.6 0.000 promoter-TSS (NR_026697) promoter-TSS (NR_026697) -116 NM_001070 7283 Hs.279669 NM_001070 ENSG00000131462 TUBG1 CDCBM4|GCP-1|TUBG|TUBGCP1 tubulin gamma 1 protein-coding chr11-95 chr11 62123734 62123944 + 65.6 0.000 promoter-TSS (NM_020238) promoter-TSS (NM_020238) -172 NM_020238 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr14-35 chr14 22929479 22929689 + 65.6 0.000 promoter-TSS (NM_001282953) promoter-TSS (NM_001282953) -25 NR_110002 101926933 Hs.727321 NR_110002 ENSG00000257285 LOC101926933 - uncharacterized LOC101926933 ncRNA chr15-34 chr15 92882383 92882593 + 65.5 0.000 promoter-TSS (NR_037600) promoter-TSS (NR_037600) -355 NR_037600 100507217 Hs.622504 NR_037600 LINC01578 - long intergenic non-protein coding RNA 1578 ncRNA chr10-38 chr10 329445 329655 + 65.5 0.000 exon (NM_014974, exon 30 of 37) exon (NM_014974, exon 30 of 37) 149556 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr16-55 chr16 1612043 1612253 + 65.4 0.000 promoter-TSS (NM_014714) promoter-TSS (NM_014714) -76 NM_014714 9742 Hs.389438 NM_014714 ENSG00000187535 IFT140 MZSDS|RP80|SRTD9|WDTC2|c305C8.4|c380F5.1|gs114 intraflagellar transport 140 protein-coding chr4-21 chr4 140524042 140524252 + 65.4 0.000 promoter-TSS (NM_153702) promoter-TSS (NM_153702) -21 NM_153702 255520 Hs.450105 NM_153702 ENSG00000179387 ELMOD2 9830169G11Rik ELMO domain containing 2 protein-coding chr3-40 chr3 38137156 38137366 + 65.4 0.000 promoter-TSS (NM_001607) promoter-TSS (NM_001607) -19 NM_001130410 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr2-88 chr2 100903012 100903222 + 65.4 0.000 intron (NM_002518, intron 1 of 20) intron (NM_002518, intron 1 of 20) 74044 NR_110213 101927142 Hs.656556 NR_110213 LOC101927142 - uncharacterized LOC101927142 ncRNA chr16-70 chr16 85306241 85306451 + 65.3 0.000 promoter-TSS (NR_049816) promoter-TSS (NR_049816) -21 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr3-31 chr3 197736938 197737148 + 65.3 0.000 promoter-TSS (NM_014687) promoter-TSS (NM_014687) -117 NM_001346873 9711 Hs.478868 NM_014687 ENSG00000145016 RUBCN KIAA0226|RUBICON|SCAR15 rubicon autophagy regulator protein-coding chr19-80 chr19 5978130 5978340 + 65.3 0.000 promoter-TSS (NM_007322) promoter-TSS (NM_007322) -95 NM_007322 8498 Hs.531752 NM_003624 ENSG00000031823 RANBP3 - RAN binding protein 3 protein-coding chr2-12 chr2 231514387 231514597 + 65.3 0.000 promoter-TSS (NR_024079) promoter-TSS (NR_024079) -153 NR_024079 151477 Hs.375211 NM_173513 ENSG00000181798 LINC00471 C2orf52 long intergenic non-protein coding RNA 471 ncRNA chr6-5 chr6 2765163 2765373 + 65.2 0.000 promoter-TSS (NM_130395) promoter-TSS (NM_130395) -125 NM_020135 56897 Hs.236828 NM_020135 ENSG00000124535 WRNIP1 WHIP|bA420G6.2 WRN helicase interacting protein 1 protein-coding chr14-22 chr14 64388075 64388285 + 65.2 0.000 promoter-TSS (NM_001364837) promoter-TSS (NM_001364837) -173 NM_001364837 4522 Hs.652308 NM_005956 ENSG00000100714 MTHFD1 CIMAH|MTHFC|MTHFD methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 protein-coding chr11-140 chr11 63872029 63872239 + 65.2 0.000 intron (NM_001163296, intron 1 of 16) intron (NM_001163296, intron 1 of 16) -16403 NM_017490 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr1-61 chr1 151790516 151790726 + 65.0 0.000 promoter-TSS (NM_001083964) promoter-TSS (NM_001083964) -87 NM_001083963 11022 Hs.144439 NM_006862 ENSG00000182134 TDRKH TDRD2 tudor and KH domain containing protein-coding chr21-8 chr21 36430114 36430324 + 65.0 0.000 Intergenic Intergenic 36248 NM_012130 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr3-18 chr3 9396801 9397011 + 65.0 0.000 promoter-TSS (NM_001292043) promoter-TSS (NM_001292043) -283 NR_132781 440944 Hs.598958 NM_001013713 ENSG00000206573 THUMPD3-AS1 SETD5-AS1 THUMPD3 antisense RNA 1 ncRNA chr11-139 chr11 62754194 62754404 + 64.9 0.000 promoter-TSS (NM_001363108) promoter-TSS (NM_001363108) -139 NM_001370809 79842 Hs.147554 NM_024784 ENSG00000185670 ZBTB3 - zinc finger and BTB domain containing 3 protein-coding chr19-117 chr19 5790690 5790900 + 64.9 0.000 intron (NM_020175, intron 1 of 12) CpG 368 NM_020175 56931 Hs.284297 NM_020175 ENSG00000141994 DUS3L DUS3 dihydrouridine synthase 3 like protein-coding chr17-77 chr17 2686902 2687112 + 64.9 0.000 Intergenic Intergenic 5912 NR_106834 102465465 NR_106834 ENSG00000273606 MIR6776 hsa-mir-6776 microRNA 6776 ncRNA chr11-81 chr11 83156705 83156915 + 64.9 0.000 promoter-TSS (NM_015885) promoter-TSS (NM_015885) -321 NM_015885 51585 Hs.128959 NM_015885 ENSG00000165494 PCF11 - PCF11 cleavage and polyadenylation factor subunit protein-coding chr1-81 chr1 150629125 150629335 + 64.8 0.000 promoter-TSS (NM_207047) promoter-TSS (NM_207047) -91 NM_207045 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr1-44 chr1 16217413 16217623 + 64.8 0.000 Intergenic CpG -4866 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr4-51 chr4 48909763 48909973 + 64.8 0.000 Intergenic L2c|LINE|L2 -3040 NM_152398 132299 Hs.95835 NM_152398 ENSG00000145247 OCIAD2 - OCIA domain containing 2 protein-coding chr19-152 chr19 39341879 39342089 + 64.8 0.000 promoter-TSS (NM_001303614) promoter-TSS (NM_001303614) -475 NM_018028 55095 Hs.612332 NM_018028 ENSG00000179134 SAMD4B SMGB|Smaug2 sterile alpha motif domain containing 4B protein-coding chr2-41 chr2 231781338 231781548 + 64.7 0.000 promoter-TSS (NM_001282949) promoter-TSS (NM_001282949) -116 NM_001291018 5147 Hs.516808 NM_002601 ENSG00000156973 PDE6D JBTS22|PDED phosphodiesterase 6D protein-coding chr4-28 chr4 163494431 163494641 + 64.6 0.000 promoter-TSS (NM_018352) promoter-TSS (NM_018352) -154 NM_018352 55319 Hs.267446 NM_018352 ENSG00000198498 TMA16 C4orf43 translation machinery associated 16 homolog protein-coding chr13-6 chr13 49936307 49936517 + 64.6 0.000 promoter-TSS (NR_023351) promoter-TSS (NR_023351) -72 NM_020456 57213 Hs.44235 NM_020456 ENSG00000123178 SPRYD7 C13orf1|CLLD6 SPRY domain containing 7 protein-coding chr1-105 chr1 19659801 19660011 + 64.5 0.000 Intergenic Intergenic -4969 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr16-76 chr16 3401003 3401213 + 64.5 0.000 promoter-TSS (NM_001347868) promoter-TSS (NM_001347868) -43 NM_001284528 54925 Hs.592078 NM_017810 ENSG00000140987 ZSCAN32 HCCS-5|ZNF434 zinc finger and SCAN domain containing 32 protein-coding chr5-40 chr5 133968611 133968821 + 64.5 0.000 promoter-TSS (NM_020199) promoter-TSS (NM_020199) 27 NR_134247 105379183 Hs.543907 NR_134247 LOC105379183 - uncharacterized LOC105379183 ncRNA chr17-35 chr17 19378290 19378500 + 64.5 0.000 promoter-TSS (NM_002749) promoter-TSS (NM_002749) -103 NM_002749 5598 Hs.150136 NM_002749 ENSG00000166484 MAPK7 BMK1|ERK4|ERK5|PRKM7 mitogen-activated protein kinase 7 protein-coding chr16-91 chr16 74666887 74667097 + 64.5 0.000 promoter-TSS (NM_018124) promoter-TSS (NM_018124) -115 NM_018124 55159 Hs.567525 NM_018124 ENSG00000168411 RFWD3 FANCW|RNF201 ring finger and WD repeat domain 3 protein-coding chr15-26 chr15 64825699 64825909 + 64.5 0.000 promoter-TSS (NM_001286497) promoter-TSS (NM_001286497) -157 NM_001286496 80119 Hs.112160 NM_025049 ENSG00000140451 PIF1 C15orf20|PIF PIF1 5'-to-3' DNA helicase protein-coding chr5-12 chr5 178153897 178154107 + 64.3 0.000 promoter-TSS (NM_001034833) promoter-TSS (NM_001034833) -42 NM_001034833 55651 Hs.744074 NM_017838 ENSG00000145912 NHP2 DKCB2|NHP2P|NOLA2 NHP2 ribonucleoprotein protein-coding chr21-5 chr21 14383203 14383413 + 64.2 0.000 promoter-TSS (NM_006948) promoter-TSS (NM_006948) -162 NM_006948 6782 Hs.352341 NM_006948 ENSG00000155304 HSPA13 STCH heat shock protein family A (Hsp70) member 13 protein-coding chr7-32 chr7 128862759 128862969 + 64.2 0.000 promoter-TSS (NM_001198909) promoter-TSS (NM_001198909) 8 NM_001198909 9296 Hs.78089 NM_004231 ENSG00000128524 ATP6V1F ATP6S14|VATF|Vma7 ATPase H+ transporting V1 subunit F protein-coding chr11-86 chr11 57667793 57668003 + 64.2 0.000 promoter-TSS (NM_015457) promoter-TSS (NM_015457) -216 NM_015457 25921 Hs.27239 NM_015457 ENSG00000156599 ZDHHC5 DHHC5|ZNF375 zinc finger DHHC-type containing 5 protein-coding chr19-109 chr19 45717424 45717634 + 64.2 0.000 intron (NM_001329633, intron 1 of 1) intron (NM_001329633, intron 1 of 1) -2251 NM_001329632 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding chr17-129 chr17 2347948 2348158 + 64.2 0.000 intron (NM_001346700, intron 2 of 22) intron (NM_001346700, intron 2 of 22) 10552 NM_014853 9905 Hs.513861 NM_014853 ENSG00000141258 SGSM2 RUTBC1 small G protein signaling modulator 2 protein-coding chr6-4 chr6 166627351 166627561 + 64.1 0.000 promoter-TSS (NM_021135) promoter-TSS (NM_021135) -205 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr19-134 chr19 47047970 47048180 + 64.1 0.000 intron (NM_017854, intron 1 of 2) intron (NM_017854, intron 1 of 2) 549 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chr5-22 chr5 38872316 38872526 + 64.0 0.000 intron (NM_003999, intron 2 of 17) L2c|LINE|L2 26409 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr5-15 chr5 172006738 172006948 + 64.0 0.000 promoter-TSS (NM_033645) promoter-TSS (NM_033645) 30 NM_033645 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr1-82 chr1 1399459 1399669 + 64.0 0.000 promoter-TSS (NR_015434) promoter-TSS (NR_015434) 34 NR_015434 148413 Hs.741357 NR_015434 ENSG00000224870 MRPL20-AS1 - MRPL20 antisense RNA 1 ncRNA chr5-25 chr5 132866320 132866530 + 64.0 0.000 promoter-TSS (NM_001288827) promoter-TSS (NM_001288827) -95 NM_001288827 2661 Hs.25022 NM_005260 ENSG00000164404 GDF9 POF14 growth differentiation factor 9 protein-coding chr19-178 chr19 50025418 50025628 + 64.0 0.000 promoter-TSS (NM_001308420) promoter-TSS (NM_001308420) 25 NM_001025778 51231 Hs.443330 NM_016440 ENSG00000105053 VRK3 - VRK serine/threonine kinase 3 protein-coding chr17-53 chr17 28571516 28571726 + 63.9 0.000 promoter-TSS (NM_033198) promoter-TSS (NM_033198) -97 NM_033198 94005 Hs.462550 NM_033198 ENSG00000087111 PIGS GPIBD18 phosphatidylinositol glycan anchor biosynthesis class S protein-coding chr17-34 chr17 76072450 76072660 + 63.9 0.000 promoter-TSS (NM_001260502) promoter-TSS (NM_001260502) -29 NM_001260502 6730 Hs.514495 NM_014230 ENSG00000167881 SRP68 - signal recognition particle 68 protein-coding chr16-48 chr16 68310813 68311023 + 63.7 0.000 promoter-TSS (NM_019023) promoter-TSS (NM_019023) 28 NM_032178 84138 Hs.729520 NM_032178 ENSG00000103061 SLC7A6OS - solute carrier family 7 member 6 opposite strand protein-coding chr1-72 chr1 27772987 27773197 + 63.7 0.000 promoter-TSS (NM_177424) promoter-TSS (NM_177424) -127 NM_177424 23673 Hs.523855 NM_177424 ENSG00000117758 STX12 STX13|STX14 syntaxin 12 protein-coding chr11-93 chr11 77411949 77412159 + 63.6 0.000 intron (NM_001128620, intron 1 of 15) intron (NM_001128620, intron 1 of 15) 62009 NM_002576 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr9-43 chr9 96418486 96418696 + 63.6 0.000 promoter-TSS (NM_153695) promoter-TSS (NM_153695) -221 NM_153695 195828 Hs.494557 NM_153695 ENSG00000165244 ZNF367 AFF29|CDC14B|ZFF29 zinc finger protein 367 protein-coding chr2-26 chr2 88691521 88691731 + 63.5 0.000 promoter-TSS (NM_144563) promoter-TSS (NM_144563) -47 NM_144563 22934 Hs.469264 NM_144563 ENSG00000153574 RPIA RPI|RPIAD ribose 5-phosphate isomerase A protein-coding chr7-51 chr7 149838258 149838468 + 63.5 0.000 promoter-TSS (NM_001099220) promoter-TSS (NM_001099220) -12 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding chr19-184 chr19 37317692 37317902 + 63.5 0.000 promoter-TSS (NM_001329766) promoter-TSS (NM_001329766) -85 NM_001329766 284459 Hs.640243 NM_181786 ENSG00000181666 ZNF875 HKR1 zinc finger protein 875 protein-coding chr11-90 chr11 9460716 9460926 + 63.4 0.000 promoter-TSS (NR_036539) promoter-TSS (NR_036539) -123 NR_036539 644656 Hs.597846 NR_036539 ENSG00000268403 LOC644656 - uncharacterized LOC644656 ncRNA chr6-27 chr6 151452063 151452273 + 63.4 0.000 promoter-TSS (NM_017909) promoter-TSS (NM_017909) 13 NM_001271937 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr11-88 chr11 69008859 69009069 + 63.4 0.000 intron (NM_001098515, intron 2 of 2) intron (NM_001098515, intron 2 of 2) -3390 NR_120541 101928200 Hs.703759 NR_120541 ENSG00000256508 MRGPRF-AS1 - MRGPRF antisense RNA 1 ncRNA chr19-115 chr19 12365754 12365964 + 63.4 0.000 promoter-TSS (NM_030824) promoter-TSS (NM_030824) -176 NM_030824 79973 Hs.253193 NM_030824 ENSG00000198342 ZNF442 - zinc finger protein 442 protein-coding chr19-174 chr19 49496164 49496374 + 63.4 0.000 promoter-TSS (NM_001015) promoter-TSS (NM_001015) -165 NM_001015 6205 Hs.433529 NM_001015 ENSG00000142534 RPS11 S11 ribosomal protein S11 protein-coding chr4-39 chr4 139082895 139083105 + 63.4 0.000 intron (NM_001371336, intron 4 of 8) CpG 1224 NM_001276459 1998 Hs.634040 NM_006874 ENSG00000109381 ELF2 EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2 E74 like ETS transcription factor 2 protein-coding chr13-11 chr13 110915210 110915420 + 63.3 0.000 promoter-TSS (NR_104586) promoter-TSS (NR_104586) -246 NR_104586 55608 Hs.525163 NM_017664 ENSG00000088448 ANKRD10 - ankyrin repeat domain 10 protein-coding chr10-34 chr10 323991 324201 + 63.3 0.000 intron (NM_014974, intron 31 of 36) intron (NM_014974, intron 31 of 36) 144102 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr19-44 chr19 9819273 9819483 + 63.2 0.000 promoter-TSS (NM_017703) promoter-TSS (NM_017703) -299 NM_001316942 54850 Hs.12439 NM_017703 ENSG00000127452 FBXL12 Fbl12 F-box and leucine rich repeat protein 12 protein-coding chr12-18 chr12 132908441 132908651 + 63.2 0.000 Intergenic CpG 20704 NR_110919 101928530 Hs.560003 NR_110919 ENSG00000236617 LOC101928530 - uncharacterized LOC101928530 ncRNA chr8-8 chr8 38996531 38996741 + 63.2 0.000 promoter-TSS (NM_001024381) promoter-TSS (NM_001024381) -127 NM_001024381 83877 Hs.7471 NM_031940 ENSG00000169490 TM2D2 BLP1 TM2 domain containing 2 protein-coding chr14-27 chr14 77457517 77457727 + 63.2 0.000 promoter-TSS (NM_022067) promoter-TSS (NM_022067) 18 NM_001193315 63894 Hs.16157 NM_022067 ENSG00000151445 VIPAS39 C14orf133|SPE-39|SPE39|VIPAR|VPS16B|hSPE-39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog protein-coding chr1-125 chr1 2279240 2279450 + 63.2 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 51026 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr7-27 chr7 975360 975570 + 63.2 0.000 promoter-TSS (NM_001031617) promoter-TSS (NM_001031617) 84 NM_001031617 90639 Hs.121593 NM_001031617 ENSG00000240230 COX19 - cytochrome c oxidase assembly factor COX19 protein-coding chr11-143 chr11 125592581 125592791 + 63.2 0.000 promoter-TSS (NM_001278504) promoter-TSS (NM_001278504) -118 NR_132372 105369550 Hs.732083 NR_132372 ENSG00000149557 STT3A-AS1 - STT3A antisense RNA 1 ncRNA chr3-46 chr3 48609554 48609764 + 63.2 0.000 promoter-TSS (NM_003365) promoter-TSS (NM_003365) -13 NM_003365 7384 Hs.119251 NM_003365 ENSG00000010256 UQCRC1 D3S3191|QCR1|UQCR1 ubiquinol-cytochrome c reductase core protein 1 protein-coding chr9-94 chr9 134793347 134793557 + 63.0 0.000 intron (NM_001278074, intron 32 of 65) intron (NM_001278074, intron 32 of 65) 55917 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr2-36 chr2 33599376 33599586 + 63.0 0.000 promoter-TSS (NM_001304538) promoter-TSS (NM_001304538) -119 NM_001304538 25940 Hs.468140 NM_015475 ENSG00000119812 FAM98A - family with sequence similarity 98 member A protein-coding chr19-160 chr19 4634694 4634904 + 63.0 0.000 Intergenic Intergenic -4717 NM_152362 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr19-170 chr19 10568968 10569178 + 63.0 0.000 promoter-TSS (NM_079421) promoter-TSS (NM_079421) -94 NM_079421 1032 Hs.435051 NM_001800 ENSG00000129355 CDKN2D INK4D|p19|p19-INK4D cyclin dependent kinase inhibitor 2D protein-coding chr16-47 chr16 88772905 88773115 + 63.0 0.000 intron (NM_001142864, intron 1 of 50) intron (NM_001142864, intron 1 of 50) 12210 NM_001142864 9780 Hs.377001 NM_001142864 ENSG00000103335 PIEZO1 DHS|FAM38A|LMPH3|LMPHM6|Mib piezo type mechanosensitive ion channel component 1 protein-coding chr6-9 chr6 116571237 116571447 + 63.0 0.000 promoter-TSS (NM_016104) promoter-TSS (NM_016104) -162 NM_001007464 51389 Hs.532164 NM_015952 ENSG00000111832 RWDD1 CGI-24|PTD013 RWD domain containing 1 protein-coding chr16-57 chr16 23557464 23557674 + 63.0 0.000 promoter-TSS (NR_003501) promoter-TSS (NR_003501) -158 NM_019116 56061 Hs.3459 NM_019116 ENSG00000103353 UBFD1 UBPH ubiquitin family domain containing 1 protein-coding chr16-78 chr16 84746 84956 + 63.0 0.000 TTS (NM_001243248) TTS (NM_001243248) 6626 NM_001015052 4350 Hs.459596 NM_002434 ENSG00000103152 MPG AAG|ADPG|APNG|CRA36.1|MDG|Mid1|PIG11|PIG16|anpg N-methylpurine DNA glycosylase protein-coding chr17-69 chr17 77477522 77477732 + 62.9 0.000 intron (NM_001113495, intron 1 of 9) L2c|LINE|L2 2384 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr1-93 chr1 10980247 10980457 + 62.9 0.000 intron (NM_001170754, intron 1 of 12) intron (NM_001170754, intron 1 of 12) 1685 NM_001170754 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr16-63 chr16 69726475 69726685 + 62.8 0.000 promoter-TSS (NM_001025433) promoter-TSS (NM_001025433) -20 NM_001025434 1728 Hs.406515 NM_000903 ENSG00000181019 NQO1 DHQU|DIA4|DTD|NMOR1|NMORI|QR1 NAD(P)H quinone dehydrogenase 1 protein-coding chr1-167 chr1 2174489 2174699 + 62.8 0.000 intron (NR_146911, intron 11 of 15) intron (NR_146911, intron 11 of 15) 9281 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr7-52 chr7 66681910 66682120 + 62.8 0.000 promoter-TSS (NM_001367745) promoter-TSS (NM_001367745) -151 NM_001367740 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr7-42 chr7 56051508 56051718 + 62.8 0.000 promoter-TSS (NM_001009186) promoter-TSS (NM_001009186) -152 NM_001009186 908 Hs.82916 NM_001762 ENSG00000146731 CCT6A CCT-zeta|CCT-zeta-1|CCT6|Cctz|HTR3|MoDP-2|TCP-1-zeta|TCP20|TCPZ|TTCP20 chaperonin containing TCP1 subunit 6A protein-coding chr11-135 chr11 73761188 73761398 + 62.8 0.000 promoter-TSS (NM_001243718) promoter-TSS (NM_001243718) -219 NM_002869 5870 Hs.503222 NM_002869 ENSG00000175582 RAB6A RAB6 RAB6A, member RAS oncogene family protein-coding chr10-62 chr10 369826 370036 + 62.7 0.000 intron (NM_014974, intron 17 of 36) intron (NM_014974, intron 17 of 36) 189937 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr3-13 chr3 50299433 50299643 + 62.7 0.000 promoter-TSS (NM_001200031) promoter-TSS (NM_001200031) -133 NM_003549 8372 Hs.129910 NM_003549 ENSG00000186792 HYAL3 HYAL-3|LUCA-3|LUCA3 hyaluronidase 3 protein-coding chr18-8 chr18 14132471 14132681 + 62.7 0.000 promoter-TSS (NR_033354) promoter-TSS (NR_033354) -86 NR_033354 162655 Hs.352635 NM_145287 ENSG00000175322 ZNF519 HsT2362 zinc finger protein 519 protein-coding chr12-62 chr12 95217523 95217733 + 62.7 0.000 promoter-TSS (NM_001352101) promoter-TSS (NM_001352101) -118 NM_001352095 55591 Hs.24135 NM_017599 ENSG00000028203 VEZT VEZATIN vezatin, adherens junctions transmembrane protein protein-coding chr1-233 chr1 49102870 49103080 + 62.7 0.000 intron (NM_001323575, intron 4 of 12) intron (NM_001323575, intron 4 of 12) -154436 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr1-49 chr1 27234365 27234575 + 62.6 0.000 promoter-TSS (NM_015023) promoter-TSS (NM_015023) -162 NM_015023 23038 Hs.469154 NM_015023 ENSG00000142784 WDTC1 ADP|DCAF9 WD and tetratricopeptide repeats 1 protein-coding chr10-7 chr10 931722 931932 + 62.6 0.000 promoter-TSS (NM_015155) promoter-TSS (NM_015155) -122 NM_001351277 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr7-66 chr7 128739124 128739334 + 62.6 0.000 promoter-TSS (NM_001219) promoter-TSS (NM_001219) -130 NM_001199672 813 Hs.7753 NM_001219 ENSG00000128595 CALU - calumenin protein-coding chr7-35 chr7 101252279 101252489 + 62.5 0.000 Intergenic CpG -7303 NM_016068 51024 Hs.423968 NM_016068 ENSG00000214253 FIS1 CGI-135|TTC11 fission, mitochondrial 1 protein-coding chr20-10 chr20 43514078 43514288 + 62.5 0.000 promoter-TSS (NM_015478) promoter-TSS (NM_015478) -258 NM_015478 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chr1-21 chr1 65420234 65420444 + 62.3 0.000 promoter-TSS (NM_001198681) promoter-TSS (NM_001198681) -313 NM_002303 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr9-34 chr9 130712535 130712745 + 62.2 0.000 Intergenic CpG -1241 NM_007313 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr1-160 chr1 156193899 156194109 + 62.1 0.000 promoter-TSS (NM_001286184) promoter-TSS (NM_001286184) 72 NR_104411 9673 Hs.532375 NM_014655 ENSG00000160785 SLC25A44 - solute carrier family 25 member 44 protein-coding chr2-55 chr2 26345872 26346082 + 62.1 0.000 promoter-TSS (NM_001321975) promoter-TSS (NM_001321975) -166 NM_001321975 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chrX-8 chrX 48801840 48802050 + 62.1 0.000 promoter-TSS (NM_006044) promoter-TSS (NM_006044) -4 NM_001321229 10013 Hs.6764 NM_006044 ENSG00000094631 HDAC6 CPBHM|HD6|JM21|PPP1R90 histone deacetylase 6 protein-coding chr15-18 chr15 44427017 44427227 + 62.1 0.000 promoter-TSS (NM_016396) promoter-TSS (NM_016396) -507 NM_016396 51496 Hs.497967 NM_016396 ENSG00000137770 CTDSPL2 HSPC058|HSPC129 CTD small phosphatase like 2 protein-coding chr7-76 chr7 151227283 151227493 + 62.0 0.000 promoter-TSS (NM_007189) promoter-TSS (NM_007189) -14 NM_005692 114483834 Hs.654958 NM_005692 LOC114483834 - ABCF2-H2B readthrough protein-coding chr16-67 chr16 29790445 29790655 + 62.0 0.000 promoter-TSS (NM_001256269) promoter-TSS (NM_001256269) -163 NM_007317 3835 Hs.612151 NM_007317 ENSG00000079616 KIF22 A-328A3.2|KID|KNSL4|OBP|OBP-1|OBP-2|SEMDJL2 kinesin family member 22 protein-coding chr11-57 chr11 747308 747518 + 62.0 0.000 promoter-TSS (NM_006755) promoter-TSS (NM_006755) -51 NM_006755 6888 Hs.438678 NM_006755 ENSG00000177156 TALDO1 TAL|TAL-H|TALDOR|TALH transaldolase 1 protein-coding chr2-34 chr2 32165637 32165847 + 62.0 0.000 promoter-TSS (NM_017964) promoter-TSS (NM_017964) -99 NM_001193514 55676 Hs.23248 NM_017964 ENSG00000152683 SLC30A6 MST103|MSTP103|ZNT6 solute carrier family 30 member 6 protein-coding chr12-29 chr12 120087035 120087245 + 61.9 0.000 intron (NM_001367886, intron 8 of 9) CpG 29613 NM_006861 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr12-30 chr12 123383828 123384038 + 61.9 0.000 promoter-TSS (NM_001367389) promoter-TSS (NM_001367389) -199 NR_136910 387893 Hs.443735 NM_020382 ENSG00000183955 KMT5A PR-Set7|PR/SET07|SET07|SET8|SETD8 lysine methyltransferase 5A protein-coding chr19-51 chr19 16472029 16472239 + 61.9 0.000 promoter-TSS (NM_001258374) promoter-TSS (NM_001258374) -122 NM_001258376 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr3-16 chr3 52536403 52536613 + 61.7 0.000 promoter-TSS (NM_001124767) promoter-TSS (NM_001124767) -97 NM_001124767 440957 Hs.660577 NM_001124767 ENSG00000168273 SMIM4 C3orf78 small integral membrane protein 4 protein-coding chr19-95 chr19 13747707 13747917 + 61.7 0.000 promoter-TSS (NM_030818) promoter-TSS (NM_030818) -83 NM_030818 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr19-147 chr19 58327072 58327282 + 61.7 0.000 promoter-TSS (NR_144444) promoter-TSS (NR_144444) 71 NR_144444 105372480 Hs.659382 NR_144444 LOC105372480 - uncharacterized LOC105372480 ncRNA chr3-22 chr3 127002187 127002397 + 61.7 0.000 intron (NM_032242, intron 2 of 30) intron (NM_032242, intron 2 of 30) 13698 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr5-34 chr5 171521443 171521653 + 61.7 0.000 Intergenic Intergenic 101901 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr1-119 chr1 201946543 201946753 + 61.7 0.000 promoter-TSS (NM_012134) promoter-TSS (NM_012134) -100 NM_012134 25802 Hs.519075 NM_012134 ENSG00000163431 LMOD1 1D|64kD|D1|SM-LMOD|SMLMOD leiomodin 1 protein-coding chr3-74 chr3 53891893 53892103 + 61.7 0.000 promoter-TSS (NM_021237) promoter-TSS (NM_021237) -139 NM_021237 58515 Hs.58471 NM_021237 ENSG00000113811 SELENOK HSPC030|HSPC297|SELK selenoprotein K protein-coding chr11-55 chr11 1309620 1309830 + 61.6 0.000 promoter-TSS (NM_001318516) promoter-TSS (NM_001318516) 17 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA chr14-32 chr14 104973252 104973462 + 61.6 0.000 intron (NM_138420, intron 1 of 6) intron (NM_138420, intron 1 of 6) -2850 NM_001350929 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding chr1-77 chr1 27299497 27299707 + 61.6 0.000 intron (NM_001276252, intron 12 of 15) L2c|LINE|L2 -22543 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding KI270466.1-2 KI270466.1 405 615 + 61.6 0.000 NA NA NA NA chr19-177 chr19 44051820 44052030 + 61.6 0.000 promoter-TSS (NM_013361) promoter-TSS (NM_013361) -111 NM_013361 7766 Hs.720813 NM_013361 ENSG00000178386 ZNF223 - zinc finger protein 223 protein-coding chr5-86 chr5 150905003 150905213 + 61.6 0.000 promoter-TSS (NM_001172832) promoter-TSS (NM_001172832) -125 NM_001172831 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding chr17-128 chr17 40463237 40463447 + 61.6 0.000 Intergenic Intergenic 19892 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr4-36 chr4 49657497 49657707 + 61.5 0.000 Intergenic (GAATG)n|Satellite|Satellite 670960 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr6-1 chr6 150069107 150069317 + 61.5 0.000 promoter-TSS (NM_024518) promoter-TSS (NM_024518) -91 NM_024518 79465 Hs.15422 NM_024518 ENSG00000131019 ULBP3 N2DL-3|NKG2DL3|RAET1N UL16 binding protein 3 protein-coding chr11-122 chr11 66268424 66268634 + 61.5 0.000 promoter-TSS (NM_030981) promoter-TSS (NM_030981) -110 NM_030981 81876 Hs.300816 NM_030981 ENSG00000174903 RAB1B - RAB1B, member RAS oncogene family protein-coding chr11-43 chr11 777324 777534 + 61.5 0.000 promoter-TSS (NM_001318821) promoter-TSS (NM_001318821) 58 NM_001318824 347862 Hs.218362 NM_182612 ENSG00000177225 GATD1 PDDC1 glutamine amidotransferase like class 1 domain containing 1 protein-coding chr16-79 chr16 29863344 29863554 + 61.4 0.000 promoter-TSS (NM_001286586) promoter-TSS (NM_001286586) -223 NM_001286585 10423 Hs.121549 NM_006319 ENSG00000103502 CDIPT PIS|PIS1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase protein-coding chr19-216 chr19 17080111 17080321 + 61.4 0.000 intron (NM_001130065, intron 1 of 39) intron (NM_001130065, intron 1 of 39) 4439 NM_004145 4650 Hs.123198 NM_004145 ENSG00000099331 MYO9B CELIAC4|MYR5 myosin IXB protein-coding chr17-28 chr17 74872992 74873202 + 61.4 0.000 promoter-TSS (NM_004110) promoter-TSS (NM_004110) -103 NM_001258014 2232 Hs.69745 NM_004110 ENSG00000161513 FDXR ADR|ADXR|ANOA ferredoxin reductase protein-coding chr3-58 chr3 142149485 142149695 + 61.3 0.000 promoter-TSS (NM_001178138) promoter-TSS (NM_001178138) -46 NM_001178138 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr11-171 chr11 16791655 16791865 + 61.3 0.000 intron (NM_001329631, intron 19 of 22) intron (NM_001329631, intron 19 of 22) 53113 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr8-9 chr8 86342361 86342571 + 61.3 0.000 promoter-TSS (NM_007013) promoter-TSS (NM_007013) -81 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr7-34 chr7 44999829 45000039 + 61.3 0.000 promoter-TSS (NM_001167935) promoter-TSS (NM_001167935) 188 NR_030770 83605 Hs.148272 NM_031443 ENSG00000136280 CCM2 C7orf22|OSM|PP10187 CCM2 scaffold protein protein-coding chr9-88 chr9 130690058 130690268 + 61.3 0.000 Intergenic MER51A|LTR|ERV1 -3597 NM_001282708 23404 Hs.654643 NM_014285 ENSG00000130713 EXOSC2 RRP4|Rrp4p|SHRF|hRrp4p|p7 exosome component 2 protein-coding chr21-9 chr21 41113437 41113647 + 61.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 34522 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr4-50 chr4 185839315 185839525 + 61.2 0.000 intron (NM_021069, intron 1 of 20) intron (NM_021069, intron 1 of 20) -27164 NM_003603 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr10-73 chr10 659806 660016 + 61.2 0.000 intron (NM_001355387, intron 1 of 2) intron (NM_001355387, intron 1 of 2) 9876 NM_001355388 414235 Hs.587103 NM_001012714 ENSG00000180525 PRR26 C10orf108 proline rich 26 protein-coding chr1-164 chr1 113904944 113905154 + 61.2 0.000 promoter-TSS (NM_001308312) promoter-TSS (NM_001308312) -21 NM_006594 10717 Hs.515048 NM_006594 ENSG00000134262 AP4B1 BETA-4|CPSQ5|SPG47 adaptor related protein complex 4 subunit beta 1 protein-coding chr11-195 chr11 61446173 61446383 + 61.2 0.000 3' UTR (NM_017841, exon 4 of 4) 3' UTR (NM_017841, exon 4 of 4) 16153 NM_017841 54949 Hs.313247 NM_017841 ENSG00000167985 SDHAF2 C11orf79|PGL2|SDH5 succinate dehydrogenase complex assembly factor 2 protein-coding chr17-81 chr17 28854851 28855061 + 61.0 0.000 promoter-TSS (NM_005702) promoter-TSS (NM_005702) -60 NM_005702 26284 Hs.3426 NM_005702 ENSG00000132591 ERAL1 CEGA|ERA|ERA-W|ERAL1A|ERAL1B|H-ERA|HERA-A|HERA-B|PRLTS6 Era like 12S mitochondrial rRNA chaperone 1 protein-coding chr22-52 chr22 27919320 27919530 + 61.0 0.000 promoter-TSS (NM_001284277) promoter-TSS (NM_001284277) 49 NR_026962 284900 Hs.602319 NR_026962 ENSG00000235954 TTC28-AS1 TTC28-AS|TTC28AS|dJ353E16.2 TTC28 antisense RNA 1 ncRNA chr8-19 chr8 144901546 144901756 + 61.0 0.000 promoter-TSS (NM_001363101) promoter-TSS (NM_001363101) -198 NM_001363098 58500 Hs.532277 NM_021061 ENSG00000196150 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding chr19-98 chr19 58476074 58476284 + 61.0 0.000 promoter-TSS (NM_001304453) promoter-TSS (NM_001304453) -173 NM_017908 55663 Hs.710284 NM_017908 ENSG00000083838 ZNF446 ZKSCAN20|ZSCAN30|ZSCAN52 zinc finger protein 446 protein-coding chr19-129 chr19 47349122 47349332 + 61.0 0.000 promoter-TSS (NM_014681) promoter-TSS (NM_014681) -88 NM_014681 9704 Hs.151706 NM_014681 ENSG00000134815 DHX34 DDX34|HRH1 DExH-box helicase 34 protein-coding chr6-16 chr6 151390471 151390681 + 61.0 0.000 intron (NM_020861, intron 1 of 2) CpG 983 NM_020861 57621 Hs.520073 NM_020861 ENSG00000181472 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding chr5-60 chr5 7321791 7322001 + 60.9 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -15182 NR_033906 442132 Hs.727388 NM_001034846 LOC442132 - golgin A6 family-like 1 pseudogene pseudo chr16-85 chr16 85330882 85331092 + 60.9 0.000 Intergenic Intergenic -24662 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr9-80 chr9 133855989 133856199 + 60.9 0.000 intron (NM_001134398, intron 3 of 29) L1MB5|LINE|L1 -116139 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr9-42 chr9 92764934 92765144 + 60.9 0.000 promoter-TSS (NM_015250) promoter-TSS (NM_015250) -206 NM_015250 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chr10-46 chr10 78033648 78033858 + 60.8 0.000 promoter-TSS (NM_001026) promoter-TSS (NM_001026) -7 NM_033022 6229 Hs.280130 NM_001026 ENSG00000138326 RPS24 DBA3|S24|eS24 ribosomal protein S24 protein-coding chr3-17 chr3 98522876 98523086 + 60.8 0.000 promoter-TSS (NM_001040182) promoter-TSS (NM_001040182) -79 NM_001040181 56650 Hs.531371 NM_019895 ENSG00000080822 CLDND1 C3orf4|GENX-3745|Z38 claudin domain containing 1 protein-coding chr4-62 chr4 122732484 122732694 + 60.7 0.000 promoter-TSS (NM_001178007) promoter-TSS (NM_001178007) -113 NM_001178007 166379 Hs.400698 NM_152618 ENSG00000181004 BBS12 C4orf24 Bardet-Biedl syndrome 12 protein-coding chr10-8 chr10 73811813 73812023 + 60.7 0.000 promoter-TSS (NM_001330107) promoter-TSS (NM_001330107) -98 NR_160744 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr19-225 chr19 1213921 1214131 + 60.7 0.000 intron (NM_000455, intron 1 of 9) intron (NM_000455, intron 1 of 9) 8227 NM_000455 6794 Hs.515005 NM_000455 ENSG00000118046 STK11 LKB1|PJS|hLKB1 serine/threonine kinase 11 protein-coding chr9-84 chr9 124256515 124256725 + 60.7 0.000 promoter-TSS (NM_001166167) promoter-TSS (NM_001166167) -986 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr6-25 chr6 37499784 37499994 + 60.7 0.000 promoter-TSS (NM_138493) promoter-TSS (NM_138493) 4 NM_138493 154467 Hs.284207 NM_138493 ENSG00000198937 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding chr12-88 chr12 51048064 51048274 + 60.6 0.000 promoter-TSS (NM_001351334) promoter-TSS (NM_001351334) -51 NR_147098 25875 Hs.655272 NM_015416 ENSG00000050426 LETMD1 1110019O13Rik|HCCR|HCCR-1|HCCR-2|HCCR1|HCCR2|HCRR-2|SLC55A3 LETM1 domain containing 1 protein-coding chr19-126 chr19 6199631 6199841 + 60.6 0.000 Intergenic CpG 64069 NM_001289178 81616 Hs.465720 NM_030924 ENSG00000130377 ACSBG2 BGR|BRGL|PRTD-NY3|PRTDNY3 acyl-CoA synthetase bubblegum family member 2 protein-coding chr11-149 chr11 62553543 62553753 + 60.6 0.000 Intergenic Intergenic 6658 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr8-26 chr8 73972295 73972505 + 60.6 0.000 promoter-TSS (NM_001204864) promoter-TSS (NM_001204864) -113 NM_001204857 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding chr19-167 chr19 47113221 47113431 + 60.6 0.000 intron (NM_015168, intron 1 of 14) intron (NM_015168, intron 1 of 14) 450 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chr11-78 chr11 65570146 65570356 + 60.6 0.000 promoter-TSS (NM_006396) promoter-TSS (NM_006396) 162 NR_038923 254100 Hs.595927 NR_038923 SSSCA1-AS1 - SSSCA1 antisense RNA 1 (head to head) ncRNA chr10-111 chr10 79299451 79299661 + 60.6 0.000 intron (NM_020338, intron 16 of 24) intron (NM_020338, intron 16 of 24) -47913 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr5-31 chr5 151252894 151253104 + 60.6 0.000 promoter-TSS (NM_000405) promoter-TSS (NM_000405) -186 NM_000405 2760 Hs.483873 NM_000405 ENSG00000196743 GM2A GM2-AP|SAP-3 GM2 ganglioside activator protein-coding chr5-26 chr5 108748677 108748887 + 60.4 0.000 promoter-TSS (NM_001308038) promoter-TSS (NM_001308038) -166 NM_001308028 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr11-66 chr11 66052075 66052285 + 60.4 0.000 promoter-TSS (NR_145738) promoter-TSS (NR_145738) -184 NM_006842 10992 Hs.406423 NM_006842 ENSG00000087365 SF3B2 Cus1|SAP145|SF3B145|SF3b1|SF3b150 splicing factor 3b subunit 2 protein-coding chr14-16 chr14 99683977 99684187 + 60.4 0.000 promoter-TSS (NM_006668) promoter-TSS (NM_006668) -216 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr20-19 chr20 35616376 35616586 + 60.4 0.000 intron (NM_003116, intron 1 of 11) intron (NM_003116, intron 1 of 11) 597 NM_001317931 6676 Hs.123159 NM_003116 ENSG00000061656 SPAG4 CT127|SUN4 sperm associated antigen 4 protein-coding chr10-25 chr10 26860882 26861092 + 60.4 0.000 promoter-TSS (NM_001348034) promoter-TSS (NM_001348034) 100 NM_001178124 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr17-119 chr17 869121 869331 + 60.4 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -5115 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr9-59 chr9 37465589 37465799 + 60.4 0.000 promoter-TSS (NM_014872) promoter-TSS (NM_014872) -244 NM_014872 9925 Hs.161276 NM_014872 ENSG00000168795 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding chr4-22 chr4 6269592 6269802 + 60.4 0.000 promoter-TSS (NM_001145853) promoter-TSS (NM_001145853) -153 NM_001145853 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr17-42 chr17 47970859 47971069 + 60.4 0.000 promoter-TSS (NM_001278216) promoter-TSS (NM_001278216) 8 NM_001278217 80279 Hs.20157 NM_025197 ENSG00000108465 CDK5RAP3 C53|HSF-27|IC53|LZAP|MST016|OK/SW-cl.114|PP1553 CDK5 regulatory subunit associated protein 3 protein-coding chr16-77 chr16 50741764 50741974 + 60.3 0.000 promoter-TSS (NM_001042412) promoter-TSS (NM_001042412) -181 NM_015247 1540 Hs.578973 NM_015247 ENSG00000083799 CYLD BRSS|CDMT|CYLD1|CYLDI|EAC|MFT|MFT1|SBS|TEM|USPL2 CYLD lysine 63 deubiquitinase protein-coding chr15-7 chr15 64841490 64841700 + 60.3 0.000 promoter-TSS (NM_025201) promoter-TSS (NM_025201) -288 NM_001195059 80301 Hs.709337 NM_025201 ENSG00000241839 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing O2 protein-coding chr5-66 chr5 150674025 150674235 + 60.3 0.000 intron (NM_001122853, intron 6 of 6) intron (NM_001122853, intron 6 of 6) 12879 NM_001122853 91977 Hs.91626 NM_133371 ENSG00000164591 MYOZ3 CS-3|CS3|FATZ-3|FRP3 myozenin 3 protein-coding chr16-99 chr16 68448555 68448765 + 60.3 0.000 promoter-TSS (NM_018667) promoter-TSS (NM_018667) -152 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr16-37 chr16 89921775 89921985 + 60.3 0.000 promoter-TSS (NM_001197181) promoter-TSS (NM_001197181) -45 NM_001197181 10381 Hs.511743 NM_006086 ENSG00000258947 TUBB3 CDCBM|CDCBM1|CFEOM3|CFEOM3A|FEOM3|TUBB4|beta-4 tubulin beta 3 class III protein-coding chr17-59 chr17 4731547 4731757 + 60.2 0.000 intron (NM_001001683, intron 1 of 2) CpG 224 NM_001001683 400569 Hs.513885 NM_001001683 ENSG00000161920 MED11 HSPC296 mediator complex subunit 11 protein-coding chr18-11 chr18 8747554 8747764 + 60.1 0.000 intron (NM_015210, intron 4 of 16) MLT1C|LTR|ERVL-MaLR 30278 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr12-48 chr12 54280469 54280679 + 60.1 0.000 promoter-TSS (NM_031157) promoter-TSS (NM_031157) -152 NM_031157 3178 Hs.546261 NM_002136 ENSG00000135486 HNRNPA1 ALS19|ALS20|HNRPA1|HNRPA1L3|IBMPFD3|UP 1|hnRNP A1|hnRNP-A1 heterogeneous nuclear ribonucleoprotein A1 protein-coding chr6-32 chr6 166466198 166466408 + 60.1 0.000 promoter-TSS (NR_046793) promoter-TSS (NR_046793) -920 NR_046793 100874353 Hs.675698 NR_046793 ENSG00000232082 RPS6KA2-IT1 - RPS6KA2 intronic transcript 1 ncRNA chr12-116 chr12 1605832 1606042 + 60.1 0.000 Intergenic Intergenic -11119 NM_030775 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr13-8 chr13 113821266 113821476 + 60.1 0.000 intron (NM_000820, intron 14 of 14) intron (NM_000820, intron 14 of 14) 5761 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr7-65 chr7 7640593 7640803 + 60.1 0.000 promoter-TSS (NM_001302348) promoter-TSS (NM_001302348) -54 NM_001302348 729852 Hs.652371 NM_001302348 ENSG00000219545 UMAD1 RPA3-AS1|RPA3OS UBAP1-MVB12-associated (UMA) domain containing 1 protein-coding chr12-38 chr12 56360218 56360428 + 60.1 0.000 promoter-TSS (NM_005419) promoter-TSS (NM_005419) -216 NM_198332 6773 Hs.530595 NM_005419 ENSG00000170581 STAT2 IMD44|ISGF-3|P113|STAT113 signal transducer and activator of transcription 2 protein-coding chr15-21 chr15 34969661 34969871 + 60.1 0.000 promoter-TSS (NM_014691) promoter-TSS (NM_014691) -24 NM_014691 9716 Hs.510958 NM_014691 ENSG00000021776 AQR IBP160|fSAP164 aquarius intron-binding spliceosomal factor protein-coding chr19-151 chr19 10928753 10928963 + 60.1 0.000 promoter-TSS (NM_001321439) promoter-TSS (NM_001321439) 47 NM_138358 90580 Hs.164026 NM_138358 ENSG00000142444 TIMM29 C19orf52|TIM29 translocase of inner mitochondrial membrane 29 protein-coding chrX-5 chrX 153928277 153928487 + 60.1 0.000 TTS (NM_001256120) TTS (NM_001256120) -2118 NM_001164741 393 Hs.701324 NM_001666 ENSG00000089820 ARHGAP4 C1|RGC1|RhoGAP4|SrGAP4|p115 Rho GTPase activating protein 4 protein-coding chr12-42 chr12 121686977 121687187 + 60.1 0.000 Intergenic CpG -14438 NM_001363685 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 - MORN repeat containing 3 protein-coding chr17-66 chr17 17711005 17711215 + 60.0 0.000 intron (NM_030665, intron 1 of 5) intron (NM_030665, intron 1 of 5) 29652 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr4-53 chr4 6688930 6689140 + 60.0 0.000 intron (NR_147207, intron 2 of 2) intron (NR_147207, intron 2 of 2) 1484 NR_147207 339988 Hs.434746 NR_147207 ENSG00000246526 LINC002481 - long intergenic non-protein coding RNA 2481 ncRNA chr4-58 chr4 82374052 82374262 + 60.0 0.000 promoter-TSS (NM_002138) promoter-TSS (NM_002138) -161 NM_031369 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr19-63 chr19 45584346 45584556 + 60.0 0.000 intron (NM_025136, intron 1 of 1) intron (NM_025136, intron 1 of 1) 351 NM_001017989 80207 Hs.466945 NM_025136 ENSG00000125741 OPA3 MGA3 outer mitochondrial membrane lipid metabolism regulator OPA3 protein-coding chr19-201 chr19 44113119 44113329 + 60.0 0.000 promoter-TSS (NM_001321685) promoter-TSS (NM_001321685) -41 NR_033341 100379224 Hs.585869 NR_033341 ENSG00000186019 LOC100379224 - uncharacterized LOC100379224 ncRNA chr2-29 chr2 65130201 65130411 + 60.0 0.000 promoter-TSS (NM_004161) promoter-TSS (NM_004161) -5 NM_015543 5861 Hs.310645 NM_004161 ENSG00000138069 RAB1A RAB1|YPT1 RAB1A, member RAS oncogene family protein-coding chr9-24 chr9 136483097 136483307 + 59.9 0.000 promoter-TSS (NM_014866) promoter-TSS (NM_014866) -162 NM_014866 9919 Hs.522500 NM_014866 ENSG00000148396 SEC16A KIAA0310|SEC16L|p250 SEC16 homolog A, endoplasmic reticulum export factor protein-coding chr9-40 chr9 71911230 71911440 + 59.9 0.000 promoter-TSS (NM_182505) promoter-TSS (NM_182505) -90 NM_001025780 51104 Hs.380389 NM_016014 ENSG00000107362 ABHD17B C9orf77|CGI-67|FAM108B1 abhydrolase domain containing 17B protein-coding chr17-64 chr17 78822792 78823002 + 59.9 0.000 intron (NM_001321291, intron 6 of 20) intron (NM_001321291, intron 6 of 20) 17630 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr16-32 chr16 2905406 2905616 + 59.7 0.000 Intergenic CpG -6468 NM_032296 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr19-210 chr19 44164834 44165044 + 59.7 0.000 promoter-TSS (NM_001146220) promoter-TSS (NM_001146220) -123 NM_001319088 7769 Hs.145956 NM_015919 ENSG00000167380 ZNF226 - zinc finger protein 226 protein-coding chr17-131 chr17 40417947 40418157 + 59.7 0.000 promoter-TSS (NM_001067) promoter-TSS (NM_001067) -156 NM_001067 7153 Hs.156346 NM_001067 ENSG00000131747 TOP2A TOP2|TP2A DNA topoisomerase II alpha protein-coding chr10-32 chr10 125007225 125007435 + 59.7 0.000 intron (NM_001290214, intron 3 of 10) intron (NM_001290214, intron 3 of 10) -1312 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr3-67 chr3 170222153 170222363 + 59.7 0.000 promoter-TSS (NM_002740) promoter-TSS (NM_002740) -166 NM_002740 5584 Hs.478199 NM_002740 ENSG00000163558 PRKCI DXS1179E|PKCI|nPKC-iota protein kinase C iota protein-coding chr16-38 chr16 29973613 29973823 + 59.6 0.000 promoter-TSS (NM_016151) promoter-TSS (NM_016151) -150 NM_004783 9344 Hs.291623 NM_004783 ENSG00000149930 TAOK2 MAP3K17|PSK|PSK1|PSK1-BETA|TAO1|TAO2 TAO kinase 2 protein-coding chr7-56 chr7 44582244 44582454 + 59.6 0.000 promoter-TSS (NM_001303060) promoter-TSS (NM_001303060) -54 NM_001303058 222068 Hs.598832 NM_182547 ENSG00000158604 TMED4 ERS25|GMP25iso|HNLF|p24a3|p24alpha3 transmembrane p24 trafficking protein 4 protein-coding chr3-20 chr3 49539851 49540061 + 59.6 0.000 Intergenic CpG 14410 NR_038866 100132677 Hs.435651 NR_038866 ENSG00000226913 BSN-DT BSN-AS2 BSN divergent transcript ncRNA chr6-21 chr6 116616252 116616462 + 59.6 0.000 promoter-TSS (NM_001161664) promoter-TSS (NM_001161664) -122 NM_001161664 345895 Hs.160380 NM_001010892 ENSG00000111834 RSPH4A CILD11|RSHL3|RSPH6B|dJ412I7.1 radial spoke head component 4A protein-coding chr17-74 chr17 7215036 7215246 + 59.5 0.000 intron (NM_001365, intron 3 of 21) intron (NM_001365, intron 3 of 21) -1984 NM_001270447 37 Hs.437178 NM_000018 ENSG00000072778 ACADVL ACAD6|LCACD|VLCAD acyl-CoA dehydrogenase very long chain protein-coding chr12-97 chr12 54479567 54479777 + 59.5 0.000 Intergenic Intergenic -6070 NM_144594 121355 Hs.524476 NM_144594 ENSG00000170627 GTSF1 Cue110|FAM112B gametocyte specific factor 1 protein-coding chr10-128 chr10 130021409 130021619 + 59.5 0.000 Intergenic Intergenic -57240 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr3-57 chr3 46976607 46976817 + 59.5 0.000 promoter-TSS (NM_001277074) promoter-TSS (NM_001277074) 55 NM_001277074 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr19-278 chr19 41397405 41397615 + 59.4 0.000 promoter-TSS (NM_000709) promoter-TSS (NM_000709) -151 NM_020158 56915 Hs.283741 NM_020158 ENSG00000077348 EXOSC5 RRP41B|RRP46|Rrp46p|hRrp46p|p12B exosome component 5 protein-coding chr11-87 chr11 34438750 34438960 + 59.4 0.000 promoter-TSS (NM_001752) promoter-TSS (NM_001752) -79 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding chr17-45 chr17 57662941 57663151 + 59.4 0.000 intron (NM_138962, intron 11 of 13) intron (NM_138962, intron 11 of 13) -54634 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA chr17-47 chr17 21284440 21284650 + 59.3 0.000 promoter-TSS (NM_145109) promoter-TSS (NM_145109) -166 NM_145109 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr15-30 chr15 101201445 101201655 + 59.3 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 50498 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr2-18 chr2 238060808 238061018 + 59.3 0.000 promoter-TSS (NM_016510) promoter-TSS (NM_016510) -88 NM_016510 51540 Hs.731909 NM_016510 ENSG00000132330 SCLY SCL|hSCL selenocysteine lyase protein-coding chr22-18 chr22 45996571 45996781 + 59.3 0.000 Intergenic Intergenic -9940 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo chr4-42 chr4 152352693 152352903 + 59.3 0.000 promoter-TSS (NM_018315) promoter-TSS (NM_018315) 28 NM_018315 55294 Hs.561245 NM_018315 ENSG00000109670 FBXW7 AGO|CDC4|FBW6|FBW7|FBX30|FBXO30|FBXW6|SEL-10|SEL10|hAgo|hCdc4 F-box and WD repeat domain containing 7 protein-coding chr7-71 chr7 133252950 133253160 + 59.3 0.000 promoter-TSS (NM_001037126) promoter-TSS (NM_001037126) -12 NM_001037126 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr11-128 chr11 9314620 9314830 + 59.2 0.000 promoter-TSS (NM_001165030) promoter-TSS (NM_001165030) -132 NM_015012 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B - transmembrane protein 41B protein-coding chr19-127 chr19 48203916 48204126 + 59.2 0.000 non-coding (NR_147707, exon 11 of 11) non-coding (NR_147707, exon 11 of 11) 33341 NM_199341 374920 Hs.664054 NM_199341 ENSG00000185453 ZSWIM9 C19orf68 zinc finger SWIM-type containing 9 protein-coding chr11-75 chr11 65888580 65888790 + 59.2 0.000 promoter-TSS (NM_198897) promoter-TSS (NM_198897) -214 NM_004214 9158 Hs.7768 NM_004214 ENSG00000172500 FIBP FGFIBP|FIBP-1|TROFAS FGF1 intracellular binding protein protein-coding chr2-83 chr2 241102322 241102532 + 59.2 0.000 promoter-TSS (NR_138463) promoter-TSS (NR_138463) -95 NR_028051 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr10-33 chr10 124791939 124792149 + 59.2 0.000 promoter-TSS (NM_212554) promoter-TSS (NM_212554) -157 NM_212554 399818 Hs.720819 NM_212554 ENSG00000203791 EEF1AKMT2 C10orf138|Efm4|METTL10 EEF1A lysine methyltransferase 2 protein-coding chr19-92 chr19 35740574 35740784 + 59.0 0.000 intron (NR_144338, intron 2 of 4) CpG-14298 1773 NR_144338 79713 Hs.352548 NM_024660 ENSG00000126246 IGFLR1 TMEM149 IGF like family receptor 1 protein-coding chr17-75 chr17 21043265 21043475 + 59.0 0.000 promoter-TSS (NM_015276) promoter-TSS (NM_015276) -359 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding chr14-36 chr14 23286127 23286337 + 59.0 0.000 promoter-TSS (NM_020834) promoter-TSS (NM_020834) -100 NM_020834 57594 Hs.632332 NM_020834 ENSG00000215271 HOMEZ KIAA1443 homeobox and leucine zipper encoding protein-coding chr9-70 chr9 35079794 35080004 + 59.0 0.000 5' UTR (NM_004629, exon 1 of 14) 5' UTR (NM_004629, exon 1 of 14) 117 NM_004629 2189 Hs.591084 NM_004629 ENSG00000221829 FANCG FAG|XRCC9 FA complementation group G protein-coding chr7-86 chr7 112939797 112940007 + 59.0 0.000 promoter-TSS (NM_152556) promoter-TSS (NM_152556) -27 NM_152556 154743 Hs.489734 NM_152556 ENSG00000164603 BMT2 C7orf60|SAMTOR base methyltransferase of 25S rRNA 2 homolog protein-coding chr15-37 chr15 43510658 43510868 + 59.0 0.000 promoter-TSS (NM_005657) promoter-TSS (NM_005657) -123 NM_005657 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding chr11-64 chr11 64241358 64241568 + 59.0 0.000 promoter-TSS (NM_001370360) promoter-TSS (NM_001370360) 19 NM_001370362 2286 Hs.227729 NM_004470 ENSG00000173486 FKBP2 FKBP-13|FKBP13|PPIase FKBP prolyl isomerase 2 protein-coding chr3-26 chr3 48088787 48088997 + 59.0 0.000 promoter-TSS (NM_030885) promoter-TSS (NM_030885) -44 NM_002375 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr6-7 chr6 38703153 38703363 + 58.9 0.000 promoter-TSS (NM_006708) promoter-TSS (NM_006708) -113 NM_006708 2739 Hs.268849 NM_006708 ENSG00000124767 GLO1 GLOD1|GLYI|HEL-S-74 glyoxalase I protein-coding chr7-37 chr7 21427170 21427380 + 58.9 0.000 promoter-TSS (NM_001326542) promoter-TSS (NM_001326542) -808 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr19-140 chr19 33177111 33177321 + 58.9 0.000 Intergenic CpG -17114 NM_002333 4037 Hs.515340 NM_002333 ENSG00000130881 LRP3 - LDL receptor related protein 3 protein-coding chr2-148 chr2 109447310 109447520 + 58.9 0.000 intron (NM_001099289, intron 7 of 9) intron (NM_001099289, intron 7 of 9) -133790 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr10-70 chr10 42552796 42553006 + 58.9 0.000 promoter-TSS (NR_026777) promoter-TSS (NR_026777) -31 NR_026777 100129482 Hs.278064 NR_026777 ENSG00000234420 ZNF37BP KOX21|ZNF37B zinc finger protein 37B, pseudogene pseudo chr11-67 chr11 2097481 2097691 + 58.9 0.000 Intergenic Intergenic 36623 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA KI270733.1-4 KI270733.1 168773 168983 + 58.9 0.000 NA NA NA NA chr2-62 chr2 96251751 96251961 + 58.9 0.000 3' UTR (NM_001193304, exon 4 of 4) 3' UTR (NM_001193304, exon 4 of 4) 14141 NM_001193304 55654 Hs.164303 NM_017849 ENSG00000135956 TMEM127 - transmembrane protein 127 protein-coding chr1-127 chr1 36385994 36386204 + 58.8 0.000 promoter-TSS (NM_001282547) promoter-TSS (NM_001282547) -175 NM_001282546 83931 Hs.471768 NM_032017 ENSG00000196182 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding chr20-3 chr20 17682280 17682490 + 58.8 0.000 promoter-TSS (NM_004587) promoter-TSS (NM_004587) -102 NM_001042576 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr14-40 chr14 75283468 75283678 + 58.8 0.000 Intergenic Intergenic 4745 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr17-80 chr17 80833186 80833396 + 58.8 0.000 intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -27659 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr9-53 chr9 97633527 97633737 + 58.8 0.000 promoter-TSS (NM_002486) promoter-TSS (NM_002486) -189 NM_002486 4686 Hs.595669 NM_002486 ENSG00000136937 NCBP1 CBP80|NCBP|Sto1 nuclear cap binding protein subunit 1 protein-coding chr6-30 chr6 169386567 169386777 + 58.7 0.000 Intergenic MIR3|SINE|MIR -132558 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr11-77 chr11 14892170 14892380 + 58.7 0.000 promoter-TSS (NM_024514) promoter-TSS (NM_024514) -70 NM_024514 120227 Hs.371427 NM_024514 ENSG00000186104 CYP2R1 - cytochrome P450 family 2 subfamily R member 1 protein-coding chr16-64 chr16 30065513 30065723 + 58.7 0.000 promoter-TSS (NM_001243177) promoter-TSS (NM_001243177) -142 NM_184041 226 Hs.513490 NM_000034 ENSG00000149925 ALDOA ALDA|GSD12|HEL-S-87p aldolase, fructose-bisphosphate A protein-coding chr8-20 chr8 123072528 123072738 + 58.7 0.000 promoter-TSS (NM_001145088) promoter-TSS (NM_001145088) -74 NM_001330606 93594 Hs.492716 NM_145647 ENSG00000156787 TBC1D31 Gm85|WDR67 TBC1 domain family member 31 protein-coding chr10-29 chr10 119597092 119597302 + 58.7 0.000 promoter-TSS (NM_001323967) promoter-TSS (NM_001323967) -168 NM_001323970 7073 Hs.501203 NM_003252 ENSG00000151923 TIAL1 TCBP|TIAR TIA1 cytotoxic granule associated RNA binding protein like 1 protein-coding chr5-63 chr5 14190331 14190541 + 58.7 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 47094 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr7-18 chr7 1028362 1028572 + 58.7 0.000 promoter-TSS (NR_156697) promoter-TSS (NR_156697) -35 NR_146966 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr16-62 chr16 1943226 1943436 + 58.7 0.000 promoter-TSS (NM_016332) promoter-TSS (NM_016332) -5 NM_016332 51734 Hs.655346 NM_016332 ENSG00000198736 MSRB1 HSPC270|SELR|SELX|SEPX1|SepR methionine sulfoxide reductase B1 protein-coding chr19-180 chr19 53867510 53867720 + 58.7 0.000 promoter-TSS (NM_001290191) promoter-TSS (NM_001290191) -250 NM_001020819 91663 Hs.380906 NM_138373 ENSG00000179820 MYADM SB135 myeloid associated differentiation marker protein-coding chr19-185 chr19 56507637 56507847 + 58.6 0.000 promoter-TSS (NM_020813) promoter-TSS (NM_020813) -113 NM_020813 57573 Hs.230188 NM_020813 ENSG00000196263 ZNF471 ERP1|Z1971 zinc finger protein 471 protein-coding chr3-60 chr3 50359466 50359676 + 58.6 0.000 promoter-TSS (NM_007024) promoter-TSS (NM_007024) -50 NM_007024 11070 Hs.91566 NM_007024 ENSG00000126062 TMEM115 PL6 transmembrane protein 115 protein-coding chr22-46 chr22 40651851 40652061 + 58.6 0.000 Intergenic Intergenic -15237 NM_001282662 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr4-30 chr4 10096194 10096404 + 58.6 0.000 intron (NM_005112, intron 2 of 11) intron (NM_005112, intron 2 of 11) -17607 NR_036090 100423011 NR_036090 ENSG00000264931 MIR3138 mir-3138 microRNA 3138 ncRNA chr16-110 chr16 69339579 69339789 + 58.6 0.000 promoter-TSS (NM_032382) promoter-TSS (NM_032382) -61 NM_032382 84342 Hs.130849 NM_032382 ENSG00000213380 COG8 CDG2H|DOR1 component of oligomeric golgi complex 8 protein-coding chr1-112 chr1 248838090 248838300 + 58.4 0.000 promoter-TSS (NM_024836) promoter-TSS (NM_024836) -29 NM_024836 79894 Hs.521151 NM_024836 ENSG00000171161 ZNF672 - zinc finger protein 672 protein-coding chr14-58 chr14 72926344 72926554 + 58.4 0.000 promoter-TSS (NR_147990) promoter-TSS (NR_147990) -15 NM_001163509 26094 Hs.331491 NM_015604 ENSG00000119599 DCAF4 WDR21|WDR21A DDB1 and CUL4 associated factor 4 protein-coding chr16-94 chr16 77190694 77190904 + 58.4 0.000 promoter-TSS (NM_001286639) promoter-TSS (NM_001286639) -391 NM_014940 22879 Hs.513743 NM_014940 ENSG00000103111 MON1B HSRG1|SAND2|SRG1 MON1 homolog B, secretory trafficking associated protein-coding chr22-57 chr22 35399844 35400054 + 58.3 0.000 promoter-TSS (NM_006739) promoter-TSS (NM_006739) -191 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|MGORS8|P1-CDC46 minichromosome maintenance complex component 5 protein-coding chr9-16 chr9 136118817 136119027 + 58.3 0.000 promoter-TSS (NM_152833) promoter-TSS (NM_152833) -47 NM_152833 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr19-158 chr19 3670330 3670540 + 58.3 0.000 intron (NM_001195733, intron 1 of 16) MLT1C|LTR|ERVL-MaLR 30033 NM_012398 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr3-87 chr3 155854453 155854663 + 58.3 0.000 promoter-TSS (NM_001190992) promoter-TSS (NM_001190992) -99 NM_001190992 9197 Hs.478031 NM_004733 ENSG00000169359 SLC33A1 ACATN|AT-1|AT1|CCHLND|SPG42 solute carrier family 33 member 1 protein-coding chr17-141 chr17 7587592 7587802 + 58.2 0.000 TTS (NM_006942) TTS (NM_006942) 2397 NM_006942 6665 Hs.95582 NM_006942 ENSG00000129194 SOX15 SOX20|SOX26|SOX27 SRY-box transcription factor 15 protein-coding chr16-81 chr16 30923255 30923465 + 58.2 0.000 promoter-TSS (NR_024348) promoter-TSS (NR_024348) -91 NR_024348 283932 Hs.711535 NM_175901 ENSG00000260852 FBXL19-AS1 NCRNA00095 FBXL19 antisense RNA 1 ncRNA chr19-83 chr19 16897273 16897483 + 58.2 0.000 promoter-TSS (NR_147452) promoter-TSS (NR_147452) -431 NR_147452 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr19-277 chr19 35745356 35745566 + 58.2 0.000 promoter-TSS (NM_001369824) promoter-TSS (NM_001369824) -43 NR_163169 199746 Hs.351558 NM_144987 ENSG00000161265 U2AF1L4 U2AF1-RS3|U2AF1L3|U2AF1L3V1|U2AF1RS3|U2af26 U2 small nuclear RNA auxiliary factor 1 like 4 protein-coding chr19-97 chr19 48492920 48493130 + 58.2 0.000 intron (NM_001080434, intron 13 of 15) intron (NM_001080434, intron 13 of 15) 20164 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr6-6 chr6 20212532 20212742 + 58.2 0.000 promoter-TSS (NM_001080480) promoter-TSS (NM_001080480) -168 NR_073465 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr16-87 chr16 4616235 4616445 + 58.2 0.000 Intergenic CpG-9218 -1452 NM_001330467 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr9-69 chr9 124393090 124393300 + 58.2 0.000 intron (NM_002799, intron 5 of 7) intron (NM_002799, intron 5 of 7) 22247 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr10-15 chr10 92291018 92291228 + 58.2 0.000 promoter-TSS (NM_017824) promoter-TSS (NM_017824) -44 NM_017824 54708 Hs.573490 NM_017824 ENSG00000198060 MARCH5 MARCH-V|MITOL|RNF153 membrane associated ring-CH-type finger 5 protein-coding chr1-89 chr1 10398831 10399041 + 58.2 0.000 promoter-TSS (NM_001304452) promoter-TSS (NM_001304452) -128 NM_001304451 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr6-14 chr6 155314531 155314741 + 58.1 0.000 promoter-TSS (NM_001350501) promoter-TSS (NM_001350501) -152 NM_016020 51106 Hs.279908 NM_016020 ENSG00000029639 TFB1M CGI-75|CGI75|mtTFB|mtTFB1 transcription factor B1, mitochondrial protein-coding chr17-33 chr17 4710333 4710543 + 58.1 0.000 promoter-TSS (NM_001257328) promoter-TSS (NM_001257328) -194 NM_001257328 409 Hs.435811 NM_004313 ENSG00000141480 ARRB2 ARB2|ARR2|BARR2 arrestin beta 2 protein-coding chr22-82 chr22 38181801 38182011 + 58.1 0.000 promoter-TSS (NM_003560) promoter-TSS (NM_003560) -76 NM_001349866 8398 Hs.170479 NM_003560 ENSG00000184381 PLA2G6 CaI-PLA2|GVI|INAD1|IPLA2-VIA|NBIA2|NBIA2A|NBIA2B|PARK14|PLA2|PNPLA9|iPLA2|iPLA2beta phospholipase A2 group VI protein-coding chr4-20 chr4 3074404 3074614 + 58.1 0.000 promoter-TSS (NM_002111) promoter-TSS (NM_002111) 5 NR_045414 100750326 Hs.575112 NR_045414 HTT-AS HTT-AS1|HTTAS HTT antisense RNA ncRNA chr12-53 chr12 103930165 103930375 + 58.1 0.000 promoter-TSS (NR_027249) promoter-TSS (NR_027249) -59 NR_027249 253724 Hs.506549 NR_027249 ENSG00000214198 TTC41P GNN|GNNP tetratricopeptide repeat domain 41, pseudogene pseudo chr11-202 chr11 43831020 43831230 + 58.1 0.000 intron (NM_016142, intron 7 of 10) intron (NM_016142, intron 7 of 10) -49706 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr6-70 chr6 136250332 136250542 + 58.1 0.000 promoter-TSS (NM_138419) promoter-TSS (NM_138419) -126 NM_138419 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr10-51 chr10 97446009 97446219 + 58.1 0.000 promoter-TSS (NR_134587) promoter-TSS (NR_134587) -17 NR_109895 84287 Hs.76662 NM_032327 ENSG00000171307 ZDHHC16 APH2|DHHC-16 zinc finger DHHC-type containing 16 protein-coding chr19-150 chr19 55117744 55117954 + 58.0 0.000 promoter-TSS (NM_017607) promoter-TSS (NM_017607) -212 NM_001271618 54776 Hs.631579 NM_017607 ENSG00000125503 PPP1R12C AAVS1|LENG3|MBS85|p84|p85 protein phosphatase 1 regulatory subunit 12C protein-coding chr4-43 chr4 42657246 42657456 + 58.0 0.000 promoter-TSS (NM_006095) promoter-TSS (NM_006095) -246 NM_001105529 10396 Hs.435052 NM_006095 ENSG00000124406 ATP8A1 ATPASEII|ATPIA|ATPP2 ATPase phospholipid transporting 8A1 protein-coding chr17-147 chr17 14300885 14301095 + 58.0 0.000 promoter-TSS (NM_006041) promoter-TSS (NM_006041) -91 NM_006041 9953 Hs.48384 NM_006041 ENSG00000125430 HS3ST3B1 3-OST-3B|3OST3B1|h3-OST-3B heparan sulfate-glucosamine 3-sulfotransferase 3B1 protein-coding chr16-83 chr16 3124402 3124612 + 58.0 0.000 Intergenic CpG -8909 NR_024167 81854 Hs.669490 NR_024166 ZNF205-AS1 - ZNF205 antisense RNA 1 ncRNA chr8-30 chr8 65634182 65634392 + 57.9 0.000 promoter-TSS (NM_018120) promoter-TSS (NM_018120) -70 NM_001286702 55156 Hs.269542 NM_018120 ENSG00000104442 ARMC1 Arcp armadillo repeat containing 1 protein-coding chr3-92 chr3 167734816 167735026 + 57.9 0.000 promoter-TSS (NM_145860) promoter-TSS (NM_145860) -29 NM_007217 11235 Hs.478150 NM_007217 ENSG00000114209 PDCD10 CCM3|TFAR15 programmed cell death 10 protein-coding chr19-153 chr19 5720165 5720375 + 57.9 0.000 promoter-TSS (NM_004793) promoter-TSS (NM_004793) -124 NM_001276479 9361 Hs.350265 NM_004793 ENSG00000196365 LONP1 CODASS|LON|LONP|LonHS|PIM1|PRSS15|hLON lon peptidase 1, mitochondrial protein-coding chr20-8 chr20 49046691 49046901 + 57.9 0.000 promoter-TSS (NR_110624) promoter-TSS (NR_110624) 484 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr12-72 chr12 2812622 2812832 + 57.9 0.000 promoter-TSS (NR_147202) promoter-TSS (NR_147202) 59 NM_018463 55846 Hs.239 NM_018463 ENSG00000111203 ITFG2 FGGAP1|MDS028 integrin alpha FG-GAP repeat containing 2 protein-coding chr4-77 chr4 148026099 148026309 + 57.9 0.000 intron (NM_024605, intron 19 of 22) intron (NM_024605, intron 19 of 22) 243609 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr2-86 chr2 234983798 234984008 + 57.7 0.000 intron (NM_001371305, intron 1 of 5) MLT1D|LTR|ERVL-MaLR 2529 NM_001371305 chr1-92 chr1 3900724 3900934 + 57.7 0.000 promoter-TSS (NM_207356) promoter-TSS (NM_207356) 425 NR_024455 100133612 Hs.307652 NR_024455 ENSG00000236423 LINC01134 - long intergenic non-protein coding RNA 1134 ncRNA chr19-111 chr19 49085178 49085388 + 57.7 0.000 promoter-TSS (NM_003089) promoter-TSS (NM_003089) -168 NM_003089 6625 Hs.467097 NM_003089 ENSG00000104852 SNRNP70 RNPU1Z|RPU1|SNRP70|Snp1|U1-70K|U170K|U1AP|U1RNP small nuclear ribonucleoprotein U1 subunit 70 protein-coding chr5-81 chr5 156326953 156327163 + 57.7 0.000 promoter-TSS (NM_172244) promoter-TSS (NM_172244) -106 NM_172244 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr19-90 chr19 3506017 3506227 + 57.7 0.000 promoter-TSS (NM_016263) promoter-TSS (NM_016263) -189 NM_016263 51343 Hs.413133 NM_016263 ENSG00000105325 FZR1 CDC20C|CDH1|FZR|FZR2|HCDH|HCDH1 fizzy and cell division cycle 20 related 1 protein-coding chr19-171 chr19 12551527 12551737 + 57.7 0.000 promoter-TSS (NM_144976) promoter-TSS (NM_144976) -150 NM_144976 163050 Hs.655615 NM_144976 ENSG00000249709 ZNF564 - zinc finger protein 564 protein-coding chr1-148 chr1 27672242 27672452 + 57.7 0.000 promoter-TSS (NM_002038) promoter-TSS (NM_002038) -155 NM_022872 2537 Hs.523847 NM_002038 ENSG00000126709 IFI6 6-16|FAM14C|G1P3|IFI-6-16|IFI616 interferon alpha inducible protein 6 protein-coding chr12-22 chr12 116738041 116738251 + 57.7 0.000 promoter-TSS (NM_001353625) promoter-TSS (NM_001353625) -77 NM_024738 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr1-139 chr1 43858469 43858679 + 57.7 0.000 intron (NR_073021, intron 6 of 9) intron (NR_073021, intron 6 of 9) 19952 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA chr18-10 chr18 50281568 50281778 + 57.7 0.000 promoter-TSS (NM_001204143) promoter-TSS (NM_001204143) 94 NM_001204143 4152 Hs.405610 NM_002384 ENSG00000141644 MBD1 CXXC3|PCM1|RFT methyl-CpG binding domain protein 1 protein-coding chr5-43 chr5 163437358 163437568 + 57.7 0.000 promoter-TSS (NM_001364020) promoter-TSS (NM_001364020) -108 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr2-64 chr2 233854610 233854820 + 57.6 0.000 promoter-TSS (NM_001282963) promoter-TSS (NM_001282963) -149 NM_001282962 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding chr2-40 chr2 135741602 135741812 + 57.6 0.000 promoter-TSS (NM_014607) promoter-TSS (NM_014607) -148 NM_014607 23190 Hs.591242 NM_014607 ENSG00000144224 UBXN4 UBXD2|UBXDC1|erasin UBX domain protein 4 protein-coding chr3-63 chr3 49786528 49786738 + 57.6 0.000 promoter-TSS (NM_001242829) promoter-TSS (NM_001242829) -91 NM_153273 9807 Hs.386168 NM_153273 ENSG00000176095 IP6K1 IHPK1|PiUS inositol hexakisphosphate kinase 1 protein-coding chr4-33 chr4 687392 687602 + 57.6 0.000 intron (NM_001294341, intron 1 of 9) intron (NM_001294341, intron 1 of 9) 1654 NM_032219 84179 Hs.567612 NM_032219 ENSG00000169026 SLC49A3 LP2561|MFSD7 solute carrier family 49 member 3 protein-coding chr10-66 chr10 132065863 132066073 + 57.6 0.000 promoter-TSS (NM_001323090) promoter-TSS (NM_001323090) 22 NM_001323087 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr15-99 chr15 80072376 80072586 + 57.6 0.000 promoter-TSS (NM_001242915) promoter-TSS (NM_001242915) -80 NM_001242916 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr17-82 chr17 2406968 2407178 + 57.6 0.000 TTS (NR_028335) TTS (NR_028335) -6013 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr1-165 chr1 11908417 11908627 + 57.6 0.000 TTS (NR_002754) TTS (NR_002754) 368 NR_002754 26829 NR_002754 ENSG00000199347 RNU5E-1 RNU5E|U5E RNA, U5E small nuclear 1 snRNA chr19-192 chr19 17859634 17859844 + 57.5 0.000 promoter-TSS (NM_000980) promoter-TSS (NM_000980) -171 NM_000980 6142 Hs.337766 NM_000980 ENSG00000105640 RPL18A L18A ribosomal protein L18a protein-coding chr3-65 chr3 184174646 184174856 + 57.5 0.000 promoter-TSS (NM_004068) promoter-TSS (NM_004068) -95 NM_001025205 1173 Hs.518460 NM_004068 ENSG00000161203 AP2M1 AP50|CLAPM1|mu2 adaptor related protein complex 2 subunit mu 1 protein-coding chr1-145 chr1 153922958 153923168 + 57.5 0.000 promoter-TSS (NM_020699) promoter-TSS (NM_020699) -91 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr12-66 chr12 49842870 49843080 + 57.5 0.000 exon (NM_181708, exon 1 of 2) exon (NM_181708, exon 1 of 2) 131 NM_181708 144233 Hs.142736 NM_181708 ENSG00000186666 BCDIN3D - BCDIN3 domain containing RNA methyltransferase protein-coding chr3-157 chr3 50028431 50028641 + 57.5 0.000 intron (NM_001349194, intron 3 of 17) intron (NM_001349194, intron 3 of 17) -60383 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr2-50 chr2 9631067 9631277 + 57.5 0.000 promoter-TSS (NM_006826) promoter-TSS (NM_006826) -175 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr1-262 chr1 46152023 46152233 + 57.4 0.000 intron (NM_001303427, intron 1 of 9) MamGyp-int|LTR|Gypsy 18757 NR_125987 101929626 Hs.534951 NR_125987 ENSG00000227857 LOC101929626 - uncharacterized LOC101929626 ncRNA chr1-276 chr1 21920595 21920805 + 57.4 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 16610 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr3-101 chr3 93979962 93980172 + 57.4 0.000 promoter-TSS (NM_001174150) promoter-TSS (NM_001174150) -72 NM_001174151 200894 Hs.533086 NM_144996 ENSG00000169379 ARL13B ARL2L1|JBTS8 ADP ribosylation factor like GTPase 13B protein-coding chr4-23 chr4 932247 932457 + 57.3 0.000 promoter-TSS (NM_001297425) promoter-TSS (NM_001297425) -35 NM_001297426 84286 Hs.478936 NM_032326 ENSG00000127419 TMEM175 hTMEM175 transmembrane protein 175 protein-coding chr19-72 chr19 16660175 16660385 + 57.3 0.000 promoter-TSS (NM_024104) promoter-TSS (NM_024104) -123 NM_024104 79086 Hs.356467 NM_024104 ENSG00000214046 SMIM7 C19orf42 small integral membrane protein 7 protein-coding chr19-195 chr19 933444 933654 + 57.3 0.000 intron (NM_005224, intron 3 of 8) intron (NM_005224, intron 3 of 8) 7514 NM_005224 1820 Hs.501296 NM_005224 ENSG00000116017 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT-rich interaction domain 3A protein-coding chr7-62 chr7 93232231 93232441 + 57.3 0.000 promoter-TSS (NM_017667) promoter-TSS (NM_017667) -4 NM_024553 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr12-35 chr12 6613983 6614193 + 57.1 0.000 Intergenic Intergenic -6709 NM_001363606 1108 Hs.162233 NM_001273 ENSG00000111642 CHD4 CHD-4|Mi-2b|Mi2-BETA|SIHIWES chromodomain helicase DNA binding protein 4 protein-coding chr16-114 chr16 70289354 70289564 + 57.1 0.000 promoter-TSS (NM_001257174) promoter-TSS (NM_001257174) 50 NM_001605 16 Hs.315137 NM_001605 ENSG00000090861 AARS CMT2N|EIEE29 alanyl-tRNA synthetase protein-coding chr7-53 chr7 44019183 44019393 + 57.1 0.000 promoter-TSS (NR_003655) promoter-TSS (NR_003655) -94 NR_003655 84820 Hs.657028 NM_032734 ENSG00000214783 POLR2J4 RPB11-phi RNA polymerase II subunit J4, pseudogene pseudo chr19-130 chr19 35702370 35702580 + 57.1 0.000 Intergenic CpG -2083 NM_001316902 27033 Hs.99430 NM_014383 ENSG00000011590 ZBTB32 FAXF|FAZF|Rog|TZFP|ZNF538 zinc finger and BTB domain containing 32 protein-coding chr10-17 chr10 1049020 1049230 + 57.1 0.000 promoter-TSS (NM_001317956) promoter-TSS (NM_001317956) -239 NM_001317957 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr7-36 chr7 138459986 138460196 + 57.1 0.000 promoter-TSS (NM_015905) promoter-TSS (NM_015905) -168 NM_015905 8805 Hs.490287 NM_003852 ENSG00000122779 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding chr11-103 chr11 4608113 4608323 + 57.0 0.000 promoter-TSS (NM_001304496) promoter-TSS (NM_001304496) 13 NM_018073 55128 Hs.523438 NM_018073 ENSG00000167333 TRIM68 GC109|RNF137|SS-56|SS56 tripartite motif containing 68 protein-coding chr10-109 chr10 58856614 58856824 + 57.0 0.000 Intergenic (GAATG)n|Simple_repeat|Simple_repeat 141704 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr22-56 chr22 28742428 28742638 + 57.0 0.000 promoter-TSS (NM_001005735) promoter-TSS (NM_001005735) -148 NM_001318316 150274 Hs.632780 NM_172002 ENSG00000100209 HSCB DNAJC20|HSC20|JAC1 HscB mitochondrial iron-sulfur cluster cochaperone protein-coding chr1-53 chr1 52366209 52366419 + 56.9 0.000 promoter-TSS (NM_001330585) promoter-TSS (NM_001330585) -109 NM_032449 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr22-55 chr22 20885660 20885870 + 56.9 0.000 intron (NM_004782, intron 4 of 4) intron (NM_004782, intron 4 of 4) 26758 NM_004782 9342 Hs.108002 NM_004782 ENSG00000099940 SNAP29 CEDNIK|SNAP-29 synaptosome associated protein 29 protein-coding chr12-27 chr12 51083485 51083695 + 56.9 0.000 promoter-TSS (NM_030809) promoter-TSS (NM_030809) 6 NM_030809 81566 Hs.524425 NM_030809 ENSG00000110925 CSRNP2 C12orf2|C12orf22|FAM130A1|PPP1R72|TAIP-12 cysteine and serine rich nuclear protein 2 protein-coding chr21-10 chr21 33542829 33543039 + 56.9 0.000 promoter-TSS (NM_032195) promoter-TSS (NM_032195) -42 NM_001136006 2618 Hs.473648 NM_000819 ENSG00000159131 GART AIRS|GARS|GARTF|PAIS|PGFT|PRGS phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase protein-coding chr2-30 chr2 45009563 45009773 + 56.8 0.000 promoter-TSS (NM_016932) promoter-TSS (NM_016932) -216 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr1-60 chr1 244452013 244452223 + 56.8 0.000 promoter-TSS (NM_001126) promoter-TSS (NM_001126) -58 NM_001365073 159 Hs.498313 NM_001126 ENSG00000035687 ADSS ADEH|ADSS 2|ADSS2 adenylosuccinate synthase protein-coding chr3-107 chr3 48465657 48465867 + 56.8 0.000 promoter-TSS (NM_007248) promoter-TSS (NM_007248) -68 NM_007248 11277 Hs.707026 NM_007248 ENSG00000213689 TREX1 AGS1|CRV|DRN3|HERNS three prime repair exonuclease 1 protein-coding chr19-264 chr19 633519 633729 + 56.8 0.000 promoter-TSS (NM_005035) promoter-TSS (NM_005035) -87 NM_005035 5442 Hs.254113 NM_005035 ENSG00000099821 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL RNA polymerase mitochondrial protein-coding chr11-156 chr11 14422391 14422601 + 56.8 0.000 Intergenic Intergenic -57990 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr12-59 chr12 56300397 56300607 + 56.8 0.000 promoter-TSS (NM_004077) promoter-TSS (NM_004077) -172 NM_004077 1431 Hs.743252 NM_004077 ENSG00000062485 CS - citrate synthase protein-coding chr14-46 chr14 64540341 64540551 + 56.8 0.000 promoter-TSS (NR_110550) promoter-TSS (NR_110550) -22 NM_021979 3306 Hs.432648 NM_021979 ENSG00000126803 HSPA2 HSP70-2|HSP70-3 heat shock protein family A (Hsp70) member 2 protein-coding chr19-166 chr19 35748343 35748553 + 56.7 0.000 promoter-TSS (NM_019104) promoter-TSS (NM_019104) -128 NM_019104 55957 Hs.529100 NM_019104 ENSG00000267796 LIN37 F25965|ZK418.4|lin-37 lin-37 DREAM MuvB core complex component protein-coding chr16-98 chr16 31094786 31094996 + 56.7 0.000 promoter-TSS (NM_024006) promoter-TSS (NM_024006) -94 NM_024006 79001 Hs.324844 NM_024006 ENSG00000167397 VKORC1 EDTP308|MST134|MST576|VKCFD2|VKOR vitamin K epoxide reductase complex subunit 1 protein-coding chr22-35 chr22 38218739 38218949 + 56.6 0.000 TTS (NM_012264) TTS (NM_012264) 5876 NR_132774 106635525 NR_132774 SNORA92 - small nucleolar RNA, H/ACA box 92 snoRNA chr8-25 chr8 109334117 109334327 + 56.6 0.000 promoter-TSS (NR_036471) promoter-TSS (NR_036471) -125 NM_020189 56943 Hs.492555 NM_020189 ENSG00000120533 ENY2 DC6|Sus1|e(y)2 ENY2 transcription and export complex 2 subunit protein-coding chr3-56 chr3 131381536 131381746 + 56.6 0.000 promoter-TSS (NM_152395) promoter-TSS (NM_152395) -30 NM_001171905 131870 Hs.282050 NM_152395 ENSG00000198585 NUDT16 - nudix hydrolase 16 protein-coding chr12-130 chr12 55997107 55997317 + 56.6 0.000 promoter-TSS (NM_000456) promoter-TSS (NM_000456) -64 NM_001032386 6821 Hs.558403 NM_000456 ENSG00000139531 SUOX - sulfite oxidase protein-coding chr19-235 chr19 2627539 2627749 + 56.6 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -3071 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr1-46 chr1 37692250 37692460 + 56.4 0.000 promoter-TSS (NM_001350759) promoter-TSS (NM_001350759) -113 NM_001350762 54955 Hs.272673 NM_017850 ENSG00000116922 C1orf109 - chromosome 1 open reading frame 109 protein-coding chr13-5 chr13 45341345 45341555 + 56.4 0.000 promoter-TSS (NM_001286272) promoter-TSS (NM_001286272) 105 NR_024458 100190939 Hs.375766 NR_024458 TPT1-AS1 - TPT1 antisense RNA 1 ncRNA chr19-207 chr19 2944887 2945097 + 56.3 0.000 promoter-TSS (NM_021217) promoter-TSS (NM_021217) -21 NM_021217 58492 Hs.38004 NM_021217 ENSG00000175691 ZNF77 pT1 zinc finger protein 77 protein-coding chr19-282 chr19 13781649 13781859 + 56.3 0.000 Intergenic Intergenic 7298 NM_014047 28974 Hs.231616 NM_014047 ENSG00000104979 C19orf53 HSPC023|LYDG10 chromosome 19 open reading frame 53 protein-coding chr10-83 chr10 84424838 84425048 + 56.3 0.000 promoter-TSS (NM_001284243) promoter-TSS (NM_001284243) 4 NM_001284243 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr2-33 chr2 112054312 112054522 + 56.3 0.000 promoter-TSS (NM_032824) promoter-TSS (NM_032824) -852 NM_001329914 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr10-35 chr10 56361272 56361482 + 56.3 0.000 promoter-TSS (NM_032997) promoter-TSS (NM_032997) -104 NM_001005413 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr4-49 chr4 158671919 158672129 + 56.3 0.000 promoter-TSS (NM_004453) promoter-TSS (NM_004453) 32 NR_077235 201725 Hs.380920 NM_001008393 ENSG00000205208 C4orf46 RCDG1 chromosome 4 open reading frame 46 protein-coding chr17-132 chr17 67717546 67717756 + 56.3 0.000 promoter-TSS (NM_015462) promoter-TSS (NM_015462) -182 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr11-181 chr11 118889901 118890111 + 56.2 0.000 intron (NM_001716, intron 1 of 1) intron (NM_001716, intron 1 of 1) -3386 NM_032966 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr19-155 chr19 15223382 15223592 + 56.2 0.000 Intergenic CpG 8961 NM_024794 79852 Hs.156457 NM_024794 ENSG00000105131 EPHX3 ABHD9|EH3 epoxide hydrolase 3 protein-coding chr2-75 chr2 109332485 109332695 + 56.2 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -18965 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr2-63 chr2 203014579 203014789 + 56.2 0.000 promoter-TSS (NM_001114132) promoter-TSS (NM_001114132) -195 NM_001114132 65065 Hs.648846 NM_198945 ENSG00000144426 NBEAL1 A530083I02Rik|ALS2CR16|ALS2CR17 neurobeachin like 1 protein-coding chr14-60 chr14 74763098 74763308 + 56.2 0.000 promoter-TSS (NM_019589) promoter-TSS (NM_019589) -113 NM_019589 56252 Hs.531111 NM_019589 ENSG00000119596 YLPM1 C14orf170|PPP1R169|ZAP113|ZAP3 YLP motif containing 1 protein-coding chr10-97 chr10 78805275 78805485 + 56.2 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 262068 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr16-86 chr16 27203739 27203949 + 56.2 0.000 promoter-TSS (NM_001145348) promoter-TSS (NM_001145348) -131 NM_001145348 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr1-87 chr1 3543246 3543456 + 56.2 0.000 intron (NM_001409, intron 4 of 36) CpG 17439 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr19-241 chr19 9835045 9835255 + 56.2 0.000 promoter-TSS (NR_038422) promoter-TSS (NR_038422) -57 NR_038422 5300 Hs.465849 NM_006221 ENSG00000127445 PIN1 DOD|UBL5 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 protein-coding chr17-115 chr17 7717228 7717438 + 56.2 0.000 promoter-TSS (NM_001303270) promoter-TSS (NM_001303270) -411 NM_020877 146754 Hs.367649 NM_020877 ENSG00000183914 DNAH2 DNAHC2|DNHD3 dynein axonemal heavy chain 2 protein-coding chr19-183 chr19 49641998 49642208 + 56.1 0.000 promoter-TSS (NM_021228) promoter-TSS (NM_021228) -106 NM_021228 58506 Hs.103521 NM_021228 ENSG00000126461 SCAF1 SRA1 SR-related CTD associated factor 1 protein-coding chr17-198 chr17 81683806 81684016 + 56.1 0.000 promoter-TSS (NM_001040025) promoter-TSS (NM_001040025) 13 NM_001329608 339231 Hs.658789 NM_001040025 ENSG00000214087 ARL16 - ADP ribosylation factor like GTPase 16 protein-coding chr1-106 chr1 32394553 32394763 + 56.1 0.000 promoter-TSS (NR_125352) promoter-TSS (NR_125352) -217 NM_001143890 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 - BSD domain containing 1 protein-coding chr1-90 chr1 201955240 201955450 + 56.1 0.000 promoter-TSS (NM_006335) promoter-TSS (NM_006335) -158 NM_006335 10440 Hs.20716 NM_006335 ENSG00000134375 TIMM17A TIM17|TIM17A translocase of inner mitochondrial membrane 17A protein-coding chr6-10 chr6 41072929 41073139 + 56.1 0.000 promoter-TSS (NM_001329692) promoter-TSS (NM_001329692) 60 NM_021705 4800 Hs.10441 NM_002505 ENSG00000001167 NFYA CBF-A|CBF-B|HAP2|NF-YA nuclear transcription factor Y subunit alpha protein-coding chr11-97 chr11 65833852 65834062 + 56.1 0.000 promoter-TSS (NM_152760) promoter-TSS (NM_152760) -6 NM_152760 254122 Hs.591950 NM_152760 ENSG00000172803 SNX32 SNX6B sorting nexin 32 protein-coding chr5-23 chr5 43313602 43313812 + 56.0 0.000 promoter-TSS (NM_001330663) promoter-TSS (NM_001330663) -295 NM_001324222 3157 Hs.397729 NM_002130 ENSG00000112972 HMGCS1 HMGCS 3-hydroxy-3-methylglutaryl-CoA synthase 1 protein-coding chr9-50 chr9 126914589 126914799 + 56.0 0.000 promoter-TSS (NM_001366399) promoter-TSS (NM_001366399) -80 NM_001190729 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr11-201 chr11 130002930 130003140 + 56.0 0.000 promoter-TSS (NM_001367890) promoter-TSS (NM_001367890) -200 NM_001367890 56980 Hs.275086 NM_020228 ENSG00000170325 PRDM10 PFM7|TRIS PR/SET domain 10 protein-coding chr6-22 chr6 43629242 43629452 + 56.0 0.000 promoter-TSS (NM_001003690) promoter-TSS (NM_001003690) -83 NM_019096 54676 Hs.485449 NM_019096 ENSG00000172432 GTPBP2 JABELS GTP binding protein 2 protein-coding chr10-28 chr10 122374496 122374706 + 56.0 0.000 promoter-TSS (NM_001001974) promoter-TSS (NM_001001974) -107 NM_001330178 59338 Hs.643512 NM_021622 ENSG00000107679 PLEKHA1 TAPP1 pleckstrin homology domain containing A1 protein-coding chr1-101 chr1 9326635 9326845 + 55.9 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 33846 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr16-75 chr16 8797560 8797770 + 55.9 0.000 promoter-TSS (NM_000303) promoter-TSS (NM_000303) -26 NM_015421 25880 Hs.513330 NM_015421 ENSG00000184857 TMEM186 C16orf51 transmembrane protein 186 protein-coding chr9-68 chr9 124267232 124267442 + 55.9 0.000 intron (NM_001166168, intron 1 of 9) intron (NM_001166168, intron 1 of 9) -6169 NR_149024 613206 Hs.197071 NM_001033016 ENSG00000235204 LOC613206 - uncharacterized LOC613206 ncRNA chr15-42 chr15 64507459 64507669 + 55.9 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 8144 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr4-38 chr4 38753105 38753315 + 55.9 0.000 Intergenic Intergenic 29780 NM_030956 81793 Hs.120551 NM_030956 ENSG00000174123 TLR10 CD290 toll like receptor 10 protein-coding chr18-25 chr18 36850612 36850822 + 55.9 0.000 intron (NR_136303, intron 4 of 13) MER44B|DNA|TcMar-Tigger -21501 NM_001271954 25941 Hs.436636 NM_015476 ENSG00000134779 TPGS2 C18orf10|HMFN0601|L17|PGs2 tubulin polyglutamylase complex subunit 2 protein-coding chr7-45 chr7 99466053 99466263 + 55.7 0.000 promoter-TSS (NM_001003713) promoter-TSS (NM_001003713) 9 NM_001198879 100526740 NM_001198879 ENSG00000248919 ATP5MF-PTCD1 ATP5J2-PTCD1 ATP5MF-PTCD1 readthrough protein-coding chr11-200 chr11 69497258 69497468 + 55.7 0.000 Intergenic Intergenic 11802 NR_120545 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr7-83 chr7 2444549 2444759 + 55.7 0.000 3' UTR (NM_018641, exon 2 of 2) 3' UTR (NM_018641, exon 2 of 2) 31729 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr15-40 chr15 69160539 69160749 + 55.7 0.000 promoter-TSS (NM_015554) promoter-TSS (NM_015554) 9 NM_001324094 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr22-41 chr22 41205170 41205380 + 55.6 0.000 promoter-TSS (NM_031488) promoter-TSS (NM_031488) -37 NM_031488 83746 Hs.517641 NM_031488 ENSG00000100395 L3MBTL2 H-l(3)mbt-l|L3MBT L3MBTL histone methyl-lysine binding protein 2 protein-coding chr7-47 chr7 39949560 39949770 + 55.6 0.000 promoter-TSS (NR_158201) promoter-TSS (NR_158201) -246 NR_158201 112267983 Hs.587424 NR_158201 LOC112267983 - uncharacterized LOC112267983 ncRNA chr16-73 chr16 2603301 2603511 + 55.6 0.000 promoter-TSS (NR_015441) promoter-TSS (NR_015441) 22 NR_015441 652276 Hs.720448 NR_015441 ENSG00000215154 LOC652276 - potassium channel tetramerization domain containing 5 pseudogene pseudo chr22-49 chr22 37608505 37608715 + 55.5 0.000 promoter-TSS (NM_013365) promoter-TSS (NM_013365) 136 NM_001001560 26088 Hs.499158 NM_013365 ENSG00000100083 GGA1 - golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding chr17-62 chr17 83109753 83109963 + 55.5 0.000 Intergenic Intergenic 28712 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr15-25 chr15 78988596 78988806 + 55.5 0.000 intron (NM_001145648, intron 22 of 26) intron (NM_001145648, intron 22 of 26) 9812 NR_148998 100129540 Hs.459035 NR_148998 ENSG00000177699 LOC100129540 - uncharacterized LOC100129540 ncRNA chr12-67 chr12 52069597 52069807 + 55.5 0.000 promoter-TSS (NM_021934) promoter-TSS (NM_021934) -272 NM_021934 60673 Hs.9911 NM_021934 ENSG00000123395 ATG101 C12orf44 autophagy related 101 protein-coding chr17-89 chr17 49764236 49764446 + 55.5 0.000 promoter-TSS (NM_030802) promoter-TSS (NM_030802) -210 NM_030802 81558 Hs.514308 NM_030802 ENSG00000121104 FAM117A - family with sequence similarity 117 member A protein-coding chr20-16 chr20 43590660 43590870 + 55.5 0.000 promoter-TSS (NM_001303459) promoter-TSS (NM_001303459) -172 NM_001303459 51098 Hs.444332 NM_016004 ENSG00000101052 IFT52 C20orf9|CGI-53|NGD2|NGD5 intraflagellar transport 52 protein-coding chr12-110 chr12 121992327 121992537 + 55.5 0.000 intron (NM_144668, intron 19 of 21) intron (NM_144668, intron 19 of 21) -29452 NM_001024808 605 Hs.530970 NM_020993 ENSG00000110987 BCL7A BCL7 BAF chromatin remodeling complex subunit BCL7A protein-coding chr16-107 chr16 84829272 84829482 + 55.4 0.000 intron (NM_031476, intron 1 of 14) intron (NM_031476, intron 1 of 14) 9392 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr5-138 chr5 49599794 49600004 + 55.4 0.000 Intergenic BSR/Beta|Satellite|Satellite 841389 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr5-99 chr5 111144029 111144239 + 55.4 0.000 Intergenic L1MEg1|LINE|L1 51962 NM_139281 134430 Hs.533237 NM_139281 ENSG00000134987 WDR36 GLC1G|TA-WDRP|TAWDRP|UTP21 WD repeat domain 36 protein-coding chr3-34 chr3 33440402 33440612 + 55.4 0.000 promoter-TSS (NM_001128161) promoter-TSS (NM_001128161) -102 NM_001128161 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr4-35 chr4 705786 705996 + 55.4 0.000 promoter-TSS (NM_006315) promoter-TSS (NM_006315) 59 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr17-41 chr17 31596700 31596910 + 55.4 0.000 Intergenic Intergenic 21394 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr17-248 chr17 19958082 19958292 + 55.4 0.000 exon (NM_001330152, exon 4 of 14) exon (NM_001330152, exon 4 of 14) 19641 NM_007202 11216 Hs.642676 NM_007202 ENSG00000108599 AKAP10 AKAP-10|D-AKAP-2|D-AKAP2|PRKA10 A-kinase anchoring protein 10 protein-coding chr7-70 chr7 55133764 55133974 + 55.4 0.000 intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 24030 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr2-147 chr2 97664131 97664341 + 55.4 0.000 promoter-TSS (NM_005735) promoter-TSS (NM_005735) -192 NM_005735 10120 Hs.98791 NM_005735 ENSG00000115073 ACTR1B ARP1B|CTRN2|PC3 actin related protein 1B protein-coding chr22-31 chr22 24270841 24271051 + 55.3 0.000 non-coding (NR_103546, exon 1 of 20) non-coding (NR_103546, exon 1 of 20) 115 NM_015330 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr11-105 chr11 73142371 73142581 + 55.3 0.000 promoter-TSS (NM_014824) promoter-TSS (NM_014824) -158 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr3-96 chr3 197712333 197712543 + 55.3 0.000 intron (NM_001346873, intron 2 of 21) intron (NM_001346873, intron 2 of 21) 24466 NM_014687 9711 Hs.478868 NM_014687 ENSG00000145016 RUBCN KIAA0226|RUBICON|SCAR15 rubicon autophagy regulator protein-coding chr1-166 chr1 27112170 27112380 + 55.3 0.000 intron (NR_046474, intron 1 of 10) intron (NR_046474, intron 1 of 10) 42850 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr1-121 chr1 169794810 169795020 + 55.3 0.000 promoter-TSS (NM_001366771) promoter-TSS (NM_001366771) -8 NM_033418 92342 Hs.33922 NM_033418 ENSG00000171806 METTL18 AsTP2|C1orf156|HPM1 methyltransferase like 18 protein-coding chr5-35 chr5 154445787 154445997 + 55.3 0.000 promoter-TSS (NM_001131062) promoter-TSS (NM_001131062) -70 NR_037897 386627 Hs.652021 NR_037897 SAP30L-AS1 GALNT10-AS1 SAP30L antisense RNA 1 (head to head) ncRNA chr22-104 chr22 38284148 38284358 + 55.3 0.000 Intergenic Intergenic -11243 NM_001195072 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr19-124 chr19 2783277 2783487 + 55.1 0.000 promoter-TSS (NM_003021) promoter-TSS (NM_003021) -109 NM_003021 6449 Hs.203910 NM_003021 ENSG00000104969 SGTA SGT|alphaSGT|hSGT small glutamine rich tetratricopeptide repeat containing alpha protein-coding chr22-66 chr22 20982007 20982217 + 55.1 0.000 promoter-TSS (NM_006767) promoter-TSS (NM_006767) -185 NM_006767 8216 Hs.78788 NM_006767 ENSG00000099949 LZTR1 BTBD29|LZTR-1|NS10|NS2|SWNTS2 leucine zipper like transcription regulator 1 protein-coding chr7-96 chr7 128756288 128756498 + 55.1 0.000 intron (NM_001130674, intron 3 of 6) intron (NM_001130674, intron 3 of 6) 17034 NR_074086 813 Hs.7753 NM_001219 ENSG00000128595 CALU - calumenin protein-coding chr17-93 chr17 16438721 16438931 + 55.1 0.000 promoter-TSS (NR_027179) promoter-TSS (NR_027179) -161 NR_027170 125144 Hs.368934 NM_152350 ENSG00000175061 SNHG29 C17orf45|C17orf76-AS1|FAM211A-AS1|LRRC75A-AS1|NCRNA00188|TSAP19 small nucleolar RNA host gene 29 ncRNA chr11-137 chr11 11148192 11148402 + 55.1 0.000 Intergenic Intergenic 204953 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr12-34 chr12 124385392 124385602 + 55.0 0.000 intron (NM_001077261, intron 19 of 47) intron (NM_001077261, intron 19 of 47) -48255 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr4-48 chr4 1200454 1200664 + 55.0 0.000 intron (NR_024569, intron 3 of 3) intron (NR_024569, intron 3 of 3) 8403 NR_024569 100130872 Hs.302963 NR_024569 LOC100130872 - uncharacterized LOC100130872 ncRNA chr22-24 chr22 19854870 19855080 + 55.0 0.000 promoter-TSS (NM_053004) promoter-TSS (NM_053004) -101 NM_053004 54584 Hs.105642 NM_053004 ENSG00000185838 GNB1L DGCRK3|FKSG1|GY2|WDR14|WDVCF G protein subunit beta 1 like protein-coding chr9-92 chr9 35924311 35924521 + 55.0 0.000 Intergenic Intergenic 14926 NM_001348107 158376 Hs.302677 NM_001348107 ENSG00000235387 SPAAR LINC00961|SPAR small regulatory polypeptide of amino acid response protein-coding chr4-56 chr4 86339079 86339289 + 55.0 0.000 intron (NM_001363657, intron 2 of 13) intron (NM_001363657, intron 2 of 13) 15460 NM_001318067 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr16-71 chr16 84836369 84836579 + 55.0 0.000 intron (NM_031476, intron 1 of 14) intron (NM_031476, intron 1 of 14) 16489 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr14-24 chr14 55191655 55191865 + 55.0 0.000 promoter-TSS (NM_014750) promoter-TSS (NM_014750) -175 NM_014750 9787 Hs.77695 NM_014750 ENSG00000126787 DLGAP5 DLG7|HURP DLG associated protein 5 protein-coding chr19-374 chr19 18328513 18328723 + 55.0 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -5542 NM_012321 25804 Hs.515255 NM_012321 ENSG00000130520 LSM4 GRP|YER112W LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr11-119 chr11 77066678 77066888 + 55.0 0.000 promoter-TSS (NM_004055) promoter-TSS (NM_004055) -188 NM_004055 726 Hs.248153 NM_004055 ENSG00000149260 CAPN5 ADNIV|HTRA3|VRNI|nCL-3 calpain 5 protein-coding chr19-77 chr19 4065888 4066098 + 55.0 0.000 promoter-TSS (NM_001317990) promoter-TSS (NM_001317990) -464 NM_001317990 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr2-28 chr2 10812697 10812907 + 55.0 0.000 promoter-TSS (NM_005742) promoter-TSS (NM_005742) -17 NM_005742 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr13-12 chr13 112885835 112886045 + 54.9 0.000 3' UTR (NM_015205, exon 30 of 30) 3' UTR (NM_015205, exon 30 of 30) 82698 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr9-46 chr9 35111616 35111826 + 54.9 0.000 promoter-TSS (NM_001317991) promoter-TSS (NM_001317991) -269 NM_001317991 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr9-93 chr9 128829625 128829835 + 54.9 0.000 promoter-TSS (NM_016390) promoter-TSS (NM_016390) 64 NM_016390 51490 Hs.224137 NM_016390 ENSG00000198917 SPOUT1 C9orf114|CENP-32|CENP32|HSPC109 SPOUT domain containing methyltransferase 1 protein-coding chr5-20 chr5 142770214 142770424 + 54.9 0.000 promoter-TSS (NM_001135608) promoter-TSS (NM_001135608) -58 NM_001135608 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr1-84 chr1 26234135 26234345 + 54.8 0.000 promoter-TSS (NM_001281517) promoter-TSS (NM_001281517) 40 NM_001281517 64793 Hs.63795 NM_022778 ENSG00000130695 CEP85 CCDC21 centrosomal protein 85 protein-coding chr9-104 chr9 101398696 101398906 + 54.8 0.000 promoter-TSS (NM_019051) promoter-TSS (NM_019051) -50 NR_103480 7743 Hs.50123 NM_003452 ENSG00000136870 ZNF189 - zinc finger protein 189 protein-coding chr6-15 chr6 41072422 41072632 + 54.8 0.000 promoter-TSS (NM_001329692) promoter-TSS (NM_001329692) 87 NM_001329692 221443 Hs.227457 NM_145063 ENSG00000124596 OARD1 C6orf130|TARG1|dJ34B21.3 O-acyl-ADP-ribose deacylase 1 protein-coding chr1-88 chr1 36224153 36224363 + 54.8 0.000 promoter-TSS (NM_005119) promoter-TSS (NM_005119) -185 NM_001321473 9967 Hs.744057 NM_005119 ENSG00000054118 THRAP3 BCLAF2|TRAP150 thyroid hormone receptor associated protein 3 protein-coding chr19-163 chr19 55408131 55408341 + 54.8 0.000 promoter-TSS (NM_014501) promoter-TSS (NM_014501) -448 NM_014501 27338 Hs.396393 NM_014501 ENSG00000108106 UBE2S E2-EPF|E2EPF|EPF5 ubiquitin conjugating enzyme E2 S protein-coding chr1-86 chr1 150562039 150562249 + 54.8 0.000 intron (NR_104133, intron 3 of 3) intron (NR_104133, intron 3 of 3) 10215 NR_036211 100422997 NR_036211 ENSG00000264553 MIR4257 - microRNA 4257 ncRNA chr19-194 chr19 58573325 58573535 + 54.7 0.000 promoter-TSS (NM_198055) promoter-TSS (NM_198055) -95 NM_198055 7593 Hs.399810 NM_003422 ENSG00000099326 MZF1 MZF-1|MZF1B|ZFP98|ZNF42|ZSCAN6 myeloid zinc finger 1 protein-coding chr19-121 chr19 13774400 13774610 + 54.7 0.000 promoter-TSS (NM_014047) promoter-TSS (NM_014047) 49 NM_014047 28974 Hs.231616 NM_014047 ENSG00000104979 C19orf53 HSPC023|LYDG10 chromosome 19 open reading frame 53 protein-coding chr1-78 chr1 53946064 53946274 + 54.7 0.000 promoter-TSS (NR_133633) promoter-TSS (NR_133633) 139 NM_001316935 51668 Hs.525462 NM_016126 ENSG00000081870 HSPB11 C1orf41|HSPCO34|IFT25|PP25 heat shock protein family B (small) member 11 protein-coding chr7-107 chr7 73822658 73822868 + 54.7 0.000 Intergenic Intergenic -8100 NM_001305 1364 Hs.647036 NM_001305 ENSG00000189143 CLDN4 CPE-R|CPER|CPETR|CPETR1|WBSCR8|hCPE-R claudin 4 protein-coding chr18-16 chr18 57712445 57712655 + 54.7 0.000 intron (NM_005603, intron 2 of 27) L1M1|LINE|L1 82219 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr12-64 chr12 132046566 132046776 + 54.7 0.000 intron (NM_015409, intron 39 of 52) intron (NM_015409, intron 39 of 52) 15447 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr4-17 chr4 1856110 1856320 + 54.7 0.000 promoter-TSS (NM_012318) promoter-TSS (NM_012318) -59 NM_012318 3954 Hs.120165 NM_012318 ENSG00000168924 LETM1 SLC55A1 leucine zipper and EF-hand containing transmembrane protein 1 protein-coding chr10-79 chr10 102132792 102133002 + 54.7 0.000 promoter-TSS (NM_001288727) promoter-TSS (NM_001288727) -97 NM_001288727 23082 Hs.533551 NM_015062 ENSG00000148840 PPRC1 PRC PPARG related coactivator 1 protein-coding chrX-10 chrX 54639799 54640009 + 54.7 0.000 Intergenic Intergenic 109685 NM_001184819 54552 Hs.654677 NM_019067 ENSG00000130119 GNL3L GNL3B G protein nucleolar 3 like protein-coding chr9-48 chr9 128892536 128892746 + 54.6 0.000 intron (NM_001127244, intron 2 of 3) intron (NM_001127244, intron 2 of 3) -10118 NM_001352989 883 Hs.495250 NM_004059 ENSG00000171097 KYAT1 CCBL1|GTK|KAT1|KATI kynurenine aminotransferase 1 protein-coding chr1-111 chr1 213015608 213015818 + 54.6 0.000 promoter-TSS (NM_001300755) promoter-TSS (NM_001300755) 154 NM_144567 90806 Hs.157078 NM_144567 ENSG00000174606 ANGEL2 Ccr4d|KIAA0759L angel homolog 2 protein-coding chr5-53 chr5 32313019 32313229 + 54.6 0.000 promoter-TSS (NM_001040446) promoter-TSS (NM_001040446) -185 NM_001294344 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr9-158 chr9 131733759 131733969 + 54.6 0.000 intron (NM_001304275, intron 1 of 23) intron (NM_001304275, intron 1 of 23) 3674 NM_005312 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr16-102 chr16 13919966 13920176 + 54.4 0.000 promoter-TSS (NM_005236) promoter-TSS (NM_005236) -86 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr17-88 chr17 951684 951894 + 54.4 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 27987 NM_022463 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr1-137 chr1 150568528 150568738 + 54.4 0.000 intron (NR_104133, intron 2 of 3) intron (NR_104133, intron 2 of 3) 5919 NR_104133 574406 Hs.516243 NM_001025493 ENSG00000203804 ADAMTSL4-AS1 C1orf138 ADAMTSL4 antisense RNA 1 ncRNA chr12-51 chr12 106774133 106774343 + 54.4 0.000 promoter-TSS (NR_147134) promoter-TSS (NR_147134) -444 NR_147131 55188 Hs.131306 NM_018157 ENSG00000111785 RIC8B RIC8|hSyn RIC8 guanine nucleotide exchange factor B protein-coding chr4-24 chr4 52712283 52712493 + 54.4 0.000 promoter-TSS (NR_024031) promoter-TSS (NR_024031) -6 NR_145129 57291 Hs.744077 NR_024031 ENSG00000226950 DANCR AGU2|ANCR|KIAA0114|SNHG13|lncRNA-ANCR differentiation antagonizing non-protein coding RNA ncRNA chr11-114 chr11 65859479 65859689 + 54.4 0.000 promoter-TSS (NM_001350283) promoter-TSS (NM_001350283) -849 NM_025128 80198 Hs.288798 NM_025128 ENSG00000172732 MUS81 SLX3 MUS81 structure-specific endonuclease subunit protein-coding chr16-95 chr16 2513728 2513938 + 54.3 0.000 promoter-TSS (NM_001694) promoter-TSS (NM_001694) 107 NM_001198569 527 Hs.389107 NM_001694 ENSG00000185883 ATP6V0C ATP6C|ATP6L|ATPL|VATL|VPPC|Vma3 ATPase H+ transporting V0 subunit c protein-coding chr2-59 chr2 241508579 241508789 + 54.3 0.000 promoter-TSS (NM_001271977) promoter-TSS (NM_001271977) 11 NM_001282307 10494 Hs.516807 NM_006374 ENSG00000115694 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding chr3-80 chr3 132136044 132136254 + 54.3 0.000 Intergenic Intergenic -96543 NM_153429 131034 Hs.199877 NM_130808 ENSG00000196353 CPNE4 COPN4|CPN4 copine 4 protein-coding chrX-6 chrX 47556148 47556358 + 54.3 0.000 Intergenic Intergenic -4847 NM_001256197 369 Hs.446641 NM_001654 ENSG00000078061 ARAF A-RAF|ARAF1|PKS2|RAFA1 A-Raf proto-oncogene, serine/threonine kinase protein-coding chr17-83 chr17 77430291 77430501 + 54.3 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) -20353 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr5-143 chr5 93831598 93831808 + 54.3 0.000 intron (NM_032042, intron 7 of 10) intron (NM_032042, intron 7 of 10) -90103 NM_153216 134187 Hs.678995 NM_153216 ENSG00000248483 POU5F2 SPRM-1 POU domain class 5, transcription factor 2 protein-coding chr6-41 chr6 80106396 80106606 + 54.3 0.000 promoter-TSS (NM_183050) promoter-TSS (NM_183050) -109 NM_000056 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr20-21 chr20 41618386 41618596 + 54.3 0.000 promoter-TSS (NM_032221) promoter-TSS (NM_032221) -114 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr21-7 chr21 44339108 44339318 + 54.3 0.000 promoter-TSS (NM_001271442) promoter-TSS (NM_001271442) 177 NM_001271441 755 Hs.517331 NM_004928 ENSG00000160226 CFAP410 C21orf2|LRRC76|RDMS|SMDAX|YF5/A2 cilia and flagella associated protein 410 protein-coding chr10-48 chr10 70146657 70146867 + 54.2 0.000 promoter-TSS (NR_073581) promoter-TSS (NR_073581) -22 NR_073591 219743 Hs.533655 NM_173555 ENSG00000156521 TYSND1 NET41 trypsin domain containing 1 protein-coding chr19-203 chr19 45730883 45731093 + 54.2 0.000 promoter-TSS (NM_001080469) promoter-TSS (NM_001080469) -92 NM_001080469 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding chr19-149 chr19 46661328 46661538 + 54.2 0.000 promoter-TSS (NR_040041) promoter-TSS (NR_040041) -45 NR_040041 100506068 Hs.434327 NR_040041 ENSG00000245598 DACT3-AS1 - DACT3 antisense RNA 1 ncRNA chr16-56 chr16 4693495 4693705 + 54.1 0.000 promoter-TSS (NM_032349) promoter-TSS (NM_032349) -93 NM_001193452 84309 Hs.513315 NM_032349 ENSG00000168101 NUDT16L1 SDOS|TIRR nudix hydrolase 16 like 1 protein-coding chr2-79 chr2 85595496 85595706 + 54.1 0.000 promoter-TSS (NM_016494) promoter-TSS (NM_016494) -144 NM_016494 51255 Hs.356187 NM_016494 ENSG00000168894 RNF181 HSPC238 ring finger protein 181 protein-coding chr16-74 chr16 89816757 89816967 + 54.1 0.000 promoter-TSS (NM_001286167) promoter-TSS (NM_001286167) -215 NM_001286167 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr19-142 chr19 19138392 19138602 + 54.1 0.000 promoter-TSS (NM_001256766) promoter-TSS (NM_001256766) -19 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr17-103 chr17 64496994 64497204 + 54.1 0.000 promoter-TSS (NM_007215) promoter-TSS (NM_007215) -45 NM_007215 11232 Hs.437009 NM_007215 ENSG00000256525 POLG2 HP55|MTPOLB|PEOA4|POLB|POLG-BETA|POLGB DNA polymerase gamma 2, accessory subunit protein-coding chr3-127 chr3 12508478 12508688 + 54.1 0.000 intron (NM_025265, intron 6 of 11) intron (NM_025265, intron 6 of 11) 24054 NM_001321279 80746 Hs.335550 NM_025265 ENSG00000154743 TSEN2 PCH2B|SEN2|SEN2L tRNA splicing endonuclease subunit 2 protein-coding chr7-68 chr7 7968570 7968780 + 54.1 0.000 promoter-TSS (NM_138426) promoter-TSS (NM_138426) 77 NR_110018 100505921 Hs.634989 NR_110018 LOC100505921 - uncharacterized LOC100505921 ncRNA chr3-79 chr3 88059067 88059277 + 54.0 0.000 promoter-TSS (NM_003663) promoter-TSS (NM_003663) -83 NM_001350137 55279 Hs.591650 NM_018293 ENSG00000175105 ZNF654 - zinc finger protein 654 protein-coding chr15-31 chr15 65611098 65611308 + 54.0 0.000 promoter-TSS (NM_001136043) promoter-TSS (NM_001136043) -72 NM_001366364 81556 Hs.6686 NM_030800 ENSG00000138614 INTS14 C15orf44|VWA9 integrator complex subunit 14 protein-coding chr8-33 chr8 38660161 38660371 + 54.0 0.000 Intergenic Intergenic -59009 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr12-58 chr12 120581283 120581493 + 54.0 0.000 promoter-TSS (NM_198202) promoter-TSS (NM_198202) 10 NM_198202 51367 Hs.279913 NM_015918 ENSG00000167272 POP5 HSPC004|RPP2|RPP20|hPop5 POP5 homolog, ribonuclease P/MRP subunit protein-coding chr4-29 chr4 184734125 184734335 + 54.0 0.000 promoter-TSS (NM_024629) promoter-TSS (NM_024629) -134 NR_104593 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr16-54 chr16 85151668 85151878 + 54.0 0.000 Intergenic Intergenic 14623 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr9-62 chr9 136052095 136052305 + 54.0 0.000 intron (NM_144653, intron 1 of 5) intron (NM_144653, intron 1 of 5) 43089 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr18-7 chr18 63367504 63367714 + 54.0 0.000 promoter-TSS (NM_002035) promoter-TSS (NM_002035) -403 NM_002035 2531 Hs.74050 NM_002035 ENSG00000119537 KDSR DHSR|EKVP4|FVT1|SDR35C1 3-ketodihydrosphingosine reductase protein-coding chr1-178 chr1 244353794 244354004 + 54.0 0.000 intron (NM_001276349, intron 1 of 3) intron (NM_001276349, intron 1 of 3) 1264 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr22-75 chr22 41946900 41947110 + 53.8 0.000 promoter-TSS (NM_001304370) promoter-TSS (NM_001304370) 147 NM_024053 79019 Hs.208912 NM_024053 ENSG00000100162 CENPM C22orf18|CENP-M|PANE1 centromere protein M protein-coding chr3-37 chr3 185586030 185586240 + 53.8 0.000 promoter-TSS (NM_021627) promoter-TSS (NM_021627) -160 NM_021627 59343 Hs.401388 NM_021627 ENSG00000163904 SENP2 AXAM2|SMT3IP2 SUMO specific peptidase 2 protein-coding chr2-89 chr2 218659450 218659660 + 53.8 0.000 promoter-TSS (NM_001318836) promoter-TSS (NM_001318836) 68 NM_001105537 7701 Hs.657969 NM_001105537 ENSG00000115568 ZNF142 HA4654|NEDISHM|pHZ-49 zinc finger protein 142 protein-coding chr19-283 chr19 15836927 15837137 + 53.8 0.000 TTS (NR_015379) TTS (NR_015379) 8085 NR_015379 652995 Hs.644234 NR_015379 ENSG00000214049 UCA1 CUDR|LINC00178|NCRNA00178|UCAT1|onco-lncRNA-36 urothelial cancer associated 1 ncRNA chr14-52 chr14 80941722 80941932 + 53.8 0.000 promoter-TSS (NR_157142) promoter-TSS (NR_157142) -89 NM_152446 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr11-89 chr11 47408218 47408428 + 53.7 0.000 promoter-TSS (NM_152264) promoter-TSS (NM_152264) -172 NM_152264 91252 Hs.523664 NM_152264 ENSG00000165915 SLC39A13 EDSSPD3|LZT-Hs9|SCDEDS|ZIP13 solute carrier family 39 member 13 protein-coding chr14-13 chr14 74493454 74493664 + 53.7 0.000 promoter-TSS (NM_006432) promoter-TSS (NM_006432) -47 NM_006432 10577 Hs.433222 NM_006432 ENSG00000119655 NPC2 EDDM1|HE1 NPC intracellular cholesterol transporter 2 protein-coding chr14-59 chr14 59188500 59188710 + 53.7 0.000 promoter-TSS (NM_001270520) promoter-TSS (NM_001270520) -62 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chrX-17 chrX 49043580 49043790 + 53.7 0.000 promoter-TSS (NM_006521) promoter-TSS (NM_006521) -328 NM_006521 7030 Hs.730740 NM_006521 ENSG00000068323 TFE3 RCCP2|RCCX1|TFEA|bHLHe33 transcription factor binding to IGHM enhancer 3 protein-coding chr1-133 chr1 9719204 9719414 + 53.7 0.000 intron (NM_005026, intron 9 of 23) intron (NM_005026, intron 9 of 23) 27842 NM_001350235 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr5-70 chr5 31532094 31532304 + 53.7 0.000 promoter-TSS (NM_001100412) promoter-TSS (NM_001100412) -67 NR_134298 55322 Hs.519246 NM_018356 ENSG00000082213 C5orf22 - chromosome 5 open reading frame 22 protein-coding chr16-100 chr16 88811265 88811475 + 53.7 0.000 intron (NM_001030018, intron 2 of 4) CpG 558 NM_000485 353 Hs.28914 NM_000485 ENSG00000198931 APRT AMP|APRTD adenine phosphoribosyltransferase protein-coding chr12-89 chr12 88141958 88142168 + 53.7 0.000 promoter-TSS (NM_001366580) promoter-TSS (NM_001366580) 153 NM_025114 80184 Hs.150444 NM_025114 ENSG00000198707 CEP290 3H11Ag|BBS14|CT87|JBTS5|LCA10|MKS4|NPHP6|POC3|SLSN6|rd16 centrosomal protein 290 protein-coding chr9-38 chr9 134366355 134366565 + 53.7 0.000 intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) -12835 NM_001291920 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr1-241 chr1 151311612 151311822 + 53.6 0.000 intron (NM_002651, intron 3 of 12) intron (NM_002651, intron 3 of 12) 15699 NM_001198773 5298 Hs.632465 NM_002651 ENSG00000143393 PI4KB NPIK|PI4K-BETA|PI4K92|PI4KBETA|PI4KIIIBETA|PIK4CB phosphatidylinositol 4-kinase beta protein-coding chr6-47 chr6 85593860 85594070 + 53.6 0.000 promoter-TSS (NM_153816) promoter-TSS (NM_153816) -107 NM_153816 57231 Hs.485871 NM_020468 ENSG00000135317 SNX14 RGS-PX2|SCAR20 sorting nexin 14 protein-coding chr18-6 chr18 80034065 80034275 + 53.6 0.000 promoter-TSS (NM_001305563) promoter-TSS (NM_001305563) -234 NM_001305564 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding chr11-129 chr11 65477394 65477604 + 53.6 0.000 Intergenic CpG -20239 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 ncRNA chr16-82 chr16 87317274 87317484 + 53.6 0.000 promoter-TSS (NM_001195124) promoter-TSS (NM_001195124) 13 NM_001195125 100506581 Hs.729380 NM_001195124 ENSG00000260456 C16orf95 - chromosome 16 open reading frame 95 protein-coding chr20-11 chr20 34363211 34363421 + 53.6 0.000 promoter-TSS (NM_001257138) promoter-TSS (NM_001257138) 43 NM_031483 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr19-211 chr19 57363103 57363313 + 53.6 0.000 promoter-TSS (NM_173631) promoter-TSS (NM_173631) -227 NM_173631 284306 Hs.446620 NM_173631 ENSG00000152433 ZNF547 MIP-2A|SEDLP1|TRAPPC2.19|TRAPPC2B|TRAPPC2P1 zinc finger protein 547 protein-coding chr7-125 chr7 55111068 55111278 + 53.6 0.000 intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 1334 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr8-6 chr8 143291286 143291496 + 53.6 0.000 promoter-TSS (NM_030895) promoter-TSS (NM_030895) -26 NM_030895 79943 Hs.512740 NM_030895 ENSG00000185730 ZNF696 - zinc finger protein 696 protein-coding chr5-71 chr5 157142838 157143048 + 53.6 0.000 promoter-TSS (NM_004270) promoter-TSS (NM_004270) -78 NM_004270 9443 Hs.279902 NM_004270 ENSG00000155868 MED7 ARC34|CRSP33|CRSP9 mediator complex subunit 7 protein-coding chr22-19 chr22 46035807 46036017 + 53.6 0.000 Intergenic CpG 8956 NR_027036 100271722 Hs.528519 NR_027036 LINC00899 - long intergenic non-protein coding RNA 899 ncRNA chr20-7 chr20 37179053 37179263 + 53.6 0.000 promoter-TSS (NM_001324303) promoter-TSS (NM_001324303) 112 NM_001324304 6185 Hs.370895 NM_002951 ENSG00000118705 RPN2 RIBIIR|RPN-II|RPNII|SWP1 ribophorin II protein-coding chr14-34 chr14 103597730 103597940 + 53.5 0.000 Intergenic Intergenic -31353 NM_005552 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr22-53 chr22 45612368 45612578 + 53.5 0.000 Intergenic Intergenic -6826 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr11-116 chr11 126268904 126269114 + 53.5 0.000 promoter-TSS (NR_037647) promoter-TSS (NR_037647) -27 NM_001177842 6734 Hs.368376 NM_003139 ENSG00000182934 SRPRA DP|SRPR|Sralpha SRP receptor subunit alpha protein-coding chr19-133 chr19 1260878 1261088 + 53.5 0.000 Intergenic CpG -8285 NM_001280 1153 Hs.618145 NM_001280 ENSG00000099622 CIRBP CIRP cold inducible RNA binding protein protein-coding chr15-32 chr15 69462822 69463032 + 53.5 0.000 Intergenic Intergenic 10109 NM_001003 6176 Hs.356502 NM_001003 ENSG00000137818 RPLP1 LP1|P1|RPP1 ribosomal protein lateral stalk subunit P1 protein-coding chr11-99 chr11 57657454 57657664 + 53.5 0.000 promoter-TSS (NM_001142597) promoter-TSS (NM_001142597) -185 NM_001142597 10978 Hs.523687 NM_006831 ENSG00000172409 CLP1 HEAB|hClp1 cleavage and polyadenylation factor I subunit 1 protein-coding chr5-36 chr5 138492077 138492287 + 53.5 0.000 Intergenic CpG 26703 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr4-25 chr4 10106713 10106923 + 53.4 0.000 intron (NM_017491, intron 2 of 14) intron (NM_017491, intron 2 of 14) 9981 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr2-69 chr2 219206543 219206753 + 53.4 0.000 promoter-TSS (NM_138802) promoter-TSS (NM_138802) -134 NM_138802 130617 Hs.534540 NM_138802 ENSG00000158552 ZFAND2B AIRAPL zinc finger AN1-type containing 2B protein-coding chr19-202 chr19 12333698 12333908 + 53.4 0.000 promoter-TSS (NM_001363608) promoter-TSS (NM_001363608) -170 NM_145276 147837 Hs.663510 NM_145276 ENSG00000188868 ZNF563 - zinc finger protein 563 protein-coding chr17-95 chr17 44345115 44345325 + 53.4 0.000 5' UTR (NM_002087, exon 1 of 13) 5' UTR (NM_002087, exon 1 of 13) 134 NM_002087 2896 Hs.514220 NM_002087 ENSG00000030582 GRN CLN11|GEP|GP88|PCDGF|PEPI|PGRN granulin precursor protein-coding chr19-176 chr19 2785251 2785461 + 53.4 0.000 promoter-TSS (NM_003249) promoter-TSS (NM_003249) -147 NM_003249 7064 Hs.78769 NM_003249 ENSG00000172009 THOP1 EP24.15|MEPD_HUMAN|MP78|TOP thimet oligopeptidase 1 protein-coding chr3-106 chr3 151037845 151038055 + 53.4 0.000 intron (NR_024066, intron 1 of 5) intron (NR_024066, intron 1 of 5) -48848 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr2-72 chr2 237085598 237085808 + 53.3 0.000 promoter-TSS (NM_006710) promoter-TSS (NM_006710) -186 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr12-92 chr12 108691622 108691832 + 53.3 0.000 intron (NM_001105237, intron 2 of 10) intron (NM_001105237, intron 2 of 10) 11271 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr2-118 chr2 15169767 15169977 + 53.3 0.000 intron (NR_052013, intron 50 of 50) intron (NR_052013, intron 50 of 50) 391462 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr11-206 chr11 7987101 7987311 + 53.3 0.000 promoter-TSS (NM_003754) promoter-TSS (NM_003754) -131 NM_003754 8665 Hs.516023 NM_003754 ENSG00000175390 EIF3F EIF3S5|MRT67|eIF3-p47 eukaryotic translation initiation factor 3 subunit F protein-coding chr6-55 chr6 87589946 87590156 + 53.3 0.000 promoter-TSS (NM_001350505) promoter-TSS (NM_001350505) -16 NM_012381 23595 Hs.410228 NM_012381 ENSG00000135336 ORC3 LAT|LATHEO|ORC3L origin recognition complex subunit 3 protein-coding chr15-28 chr15 42495488 42495698 + 53.3 0.000 promoter-TSS (NM_003825) promoter-TSS (NM_003825) -41 NM_003825 8773 Hs.511149 NM_003825 ENSG00000092531 SNAP23 HsT17016|SNAP-23|SNAP23A|SNAP23B synaptosome associated protein 23 protein-coding chr14-50 chr14 74302785 74302995 + 53.1 0.000 promoter-TSS (NM_020325) promoter-TSS (NM_020325) 44 NM_001353603 5826 Hs.94395 NM_005050 ENSG00000119688 ABCD4 ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L ATP binding cassette subfamily D member 4 protein-coding chr1-185 chr1 159780691 159780901 + 53.1 0.000 promoter-TSS (NM_001319658) promoter-TSS (NM_001319658) -166 NM_017823 54935 Hs.425801 NM_017823 ENSG00000158716 DUSP23 DUSP25|LDP-3|LDP3|MOSP|VHZ dual specificity phosphatase 23 protein-coding chr10-24 chr10 97498596 97498806 + 53.1 0.000 promoter-TSS (NM_001289404) promoter-TSS (NM_001289404) -92 NM_001330128 64210 Hs.500721 NM_022362 ENSG00000155229 MMS19 CIAO4|MET18|MMS19L|hMMS19 MMS19 homolog, cytosolic iron-sulfur assembly component protein-coding chr7-85 chr7 108526233 108526443 + 53.1 0.000 promoter-TSS (NM_001256008) promoter-TSS (NM_001256008) -203 NM_015723 50640 Hs.617340 NM_015723 ENSG00000135241 PNPLA8 IPLA2-2|IPLA2G|MMLA|PNPLA-gamma|iPLA2gamma patatin like phospholipase domain containing 8 protein-coding chr11-166 chr11 34105370 34105580 + 53.1 0.000 promoter-TSS (NM_024662) promoter-TSS (NM_024662) -154 NM_024662 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr11-73 chr11 44565187 44565397 + 53.1 0.000 promoter-TSS (NM_002231) promoter-TSS (NM_002231) -371 NM_001024844 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr10-67 chr10 784787 784997 + 53.1 0.000 Intergenic Intergenic -95224 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr12-138 chr12 122526924 122527134 + 53.1 0.000 promoter-TSS (NR_036435) promoter-TSS (NR_036435) -93 NM_023012 65117 Hs.432996 NM_023012 ENSG00000111011 RSRC2 - arginine and serine rich coiled-coil 2 protein-coding chr1-102 chr1 202861521 202861731 + 53.1 0.000 promoter-TSS (NR_002929) promoter-TSS (NR_002929) -128 NR_002929 148709 Hs.162880 NR_002929 ENSG00000234996 LOC148709 - actin gamma 1 pseudogene pseudo chr19-227 chr19 17511372 17511582 + 53.1 0.000 promoter-TSS (NM_012088) promoter-TSS (NM_012088) -172 NM_012088 25796 Hs.466165 NM_012088 ENSG00000130313 PGLS 6PGL|HEL-S-304 6-phosphogluconolactonase protein-coding chr12-47 chr12 54324821 54325031 + 53.0 0.000 promoter-TSS (NM_001271734) promoter-TSS (NM_001271734) -205 NM_016057 22818 Hs.505652 NM_016057 ENSG00000111481 COPZ1 CGI-120|COPZ|HSPC181|zeta-COP|zeta1-COP coatomer protein complex subunit zeta 1 protein-coding chr9-29 chr9 134502913 134503123 + 53.0 0.000 Intergenic Intergenic 96458 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr2-137 chr2 219452930 219453140 + 53.0 0.000 intron (NM_005876, intron 6 of 40) intron (NM_005876, intron 6 of 40) -7777 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr11-144 chr11 65333742 65333952 + 53.0 0.000 promoter-TSS (NM_006268) promoter-TSS (NM_006268) -5 NM_006268 5977 Hs.13495 NM_006268 ENSG00000133884 DPF2 CSS7|REQ|UBID4|ubi-d4 double PHD fingers 2 protein-coding chr16-35 chr16 53130671 53130881 + 53.0 0.000 promoter-TSS (NM_001352127) promoter-TSS (NM_001352127) -236 NM_001352127 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding KI270733.1-6 KI270733.1 166566 166776 + 53.0 0.000 NA NA NA NA chr19-219 chr19 2236492 2236702 + 52.9 0.000 promoter-TSS (NM_001300836) promoter-TSS (NM_001300836) -227 NM_007165 8175 Hs.115232 NM_007165 ENSG00000104897 SF3A2 PRP11|PRPF11|SAP62|SF3a66 splicing factor 3a subunit 2 protein-coding chr1-130 chr1 35769864 35770074 + 52.9 0.000 promoter-TSS (NM_022111) promoter-TSS (NM_022111) 9 NM_001330490 63967 Hs.175613 NM_022111 ENSG00000092853 CLSPN - claspin protein-coding chr3-89 chr3 40453166 40453376 + 52.9 0.000 promoter-TSS (NR_040100) promoter-TSS (NR_040100) 37 NR_040100 285266 Hs.619663 NR_040100 ENSG00000223797 ENTPD3-AS1 - ENTPD3 antisense RNA 1 ncRNA chr17-67 chr17 80454658 80454868 + 52.9 0.000 Intergenic CpG 21844 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr9-28 chr9 128724113 128724323 + 52.9 0.000 promoter-TSS (NM_001318015) promoter-TSS (NM_001318015) -91 NM_001318020 84885 Hs.133122 NM_032799 ENSG00000160446 ZDHHC12 DHHC-12|ZNF400 zinc finger DHHC-type containing 12 protein-coding chr12-103 chr12 56449181 56449391 + 52.9 0.000 TTS (NM_012064) TTS (NM_012064) 140 NM_001330295 8914 Hs.118631 NM_003920 ENSG00000111602 TIMELESS TIM|TIM1|hTIM timeless circadian regulator protein-coding chr17-68 chr17 82098578 82098788 + 52.9 0.000 promoter-TSS (NM_004104) promoter-TSS (NM_004104) -447 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr20-32 chr20 35516421 35516631 + 52.8 0.000 3' UTR (NM_007186, exon 35 of 35) 3' UTR (NM_007186, exon 35 of 35) 13126 NR_026933 140873 Hs.158680 NM_080828 ENSG00000125975 C20orf173 dJ477O4.4 chromosome 20 open reading frame 173 protein-coding chr17-102 chr17 45061349 45061559 + 52.8 0.000 promoter-TSS (NM_001321326) promoter-TSS (NM_001321326) 137 NM_021079 4836 Hs.532790 NM_021079 ENSG00000136448 NMT1 NMT N-myristoyltransferase 1 protein-coding chr16-60 chr16 31142293 31142503 + 52.8 0.000 intron (NM_001258290, intron 10 of 14) CpG -6671 NM_002773 5652 Hs.75799 NM_002773 ENSG00000052344 PRSS8 CAP1|PROSTASIN serine protease 8 protein-coding chr19-230 chr19 13162800 13163010 + 52.8 0.000 Intergenic CpG 12494 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr7-84 chr7 2354599 2354809 + 52.8 0.000 promoter-TSS (NM_001362791) promoter-TSS (NM_001362791) -123 NM_001037283 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr3-104 chr3 79019435 79019645 + 52.8 0.000 promoter-TSS (NM_133631) promoter-TSS (NM_133631) -81 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr10-30 chr10 71713382 71713592 + 52.8 0.000 3' UTR (NM_001168390, exon 2 of 2) 3' UTR (NM_001168390, exon 2 of 2) 6291 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr9-30 chr9 134641533 134641743 + 52.8 0.000 promoter-TSS (NM_000093) promoter-TSS (NM_000093) -167 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr1-186 chr1 201888594 201888804 + 52.8 0.000 promoter-TSS (NR_030775) promoter-TSS (NR_030775) 22 NM_198149 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr17-87 chr17 29294117 29294327 + 52.8 0.000 promoter-TSS (NM_020772) promoter-TSS (NM_020772) -74 NM_020772 57532 Hs.462598 NM_020772 ENSG00000108256 NUFIP2 182-FIP|82-FIP|FIP-82|PIG1 nuclear FMR1 interacting protein 2 protein-coding chr2-106 chr2 159202716 159202926 + 52.8 0.000 intron (NM_001350065, intron 20 of 27) intron (NM_001350065, intron 20 of 27) 15986 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr3-50 chr3 9731214 9731424 + 52.8 0.000 promoter-TSS (NM_001319050) promoter-TSS (NM_001319050) -410 NM_001319049 7862 Hs.1004 NM_004634 ENSG00000156983 BRPF1 BR140|IDDDFP bromodomain and PHD finger containing 1 protein-coding chr19-301 chr19 11346354 11346564 + 52.7 0.000 promoter-TSS (NM_198536) promoter-TSS (NM_198536) -60 NM_001080503 126075 Hs.631636 NM_001080503 ENSG00000183401 CCDC159 - coiled-coil domain containing 159 protein-coding chr17-219 chr17 76314797 76315007 + 52.7 0.000 intron (NM_001366236, intron 7 of 9) intron (NM_001366236, intron 7 of 9) -7222 NM_032134 84074 Hs.252739 NM_032134 ENSG00000129646 QRICH2 SPGF35 glutamine rich 2 protein-coding chr10-36 chr10 28532788 28532998 + 52.7 0.000 promoter-TSS (NR_033805) promoter-TSS (NR_033805) 114 NM_100264 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr19-139 chr19 2543684 2543894 + 52.7 0.000 intron (NM_052847, intron 3 of 4) CpG 67662 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr7-64 chr7 2641702 2641912 + 52.7 0.000 intron (NM_025250, intron 1 of 13) intron (NM_025250, intron 1 of 13) 9821 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr16-42 chr16 67562107 67562317 + 52.7 0.000 promoter-TSS (NR_158165) promoter-TSS (NR_158165) 97 NR_158165 107984813 Hs.385760 NR_158165 LOC107984813 - uncharacterized LOC107984813 ncRNA chr19-168 chr19 48993652 48993862 + 52.6 0.000 promoter-TSS (NR_135578) promoter-TSS (NR_135578) -130 NM_001321190 10856 Hs.515846 NM_006666 ENSG00000183207 RUVBL2 CGI-46|ECP-51|ECP51|INO80J|REPTIN|RVB2|TAP54-beta|TIH2|TIP48|TIP49B RuvB like AAA ATPase 2 protein-coding chr22-36 chr22 37696805 37697015 + 52.6 0.000 promoter-TSS (NM_001039141) promoter-TSS (NM_001039141) -138 NM_001039141 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr10-146 chr10 87550865 87551075 + 52.6 0.000 intron (NM_001178118, intron 4 of 4) L1M8|LINE|L1 43137 NM_001178118 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding chr19-224 chr19 49453387 49453597 + 52.6 0.000 intron (NM_001145396, intron 1 of 15) CpG 267 NM_001145396 126133 Hs.719998 NM_153329 ENSG00000161618 ALDH16A1 - aldehyde dehydrogenase 16 family member A1 protein-coding chr4-46 chr4 39527415 39527625 + 52.6 0.000 promoter-TSS (NM_001184701) promoter-TSS (NM_001184701) -81 NM_001184701 7358 Hs.572518 NM_003359 ENSG00000109814 UGDH GDH|UDP-GlcDH|UDPGDH|UGD UDP-glucose 6-dehydrogenase protein-coding chr7-141 chr7 100612228 100612438 + 52.4 0.000 promoter-TSS (NM_001040099) promoter-TSS (NM_001040099) -49 NM_001363416 64598 Hs.521086 NM_023948 ENSG00000106330 MOSPD3 CDS3|NET30 motile sperm domain containing 3 protein-coding chr11-68 chr11 78188594 78188804 + 52.4 0.000 promoter-TSS (NM_020798) promoter-TSS (NM_020798) -73 NM_001029859 283219 Hs.528439 NM_001029859 ENSG00000188997 KCTD21 KCASH2 potassium channel tetramerization domain containing 21 protein-coding chr5-39 chr5 36151910 36152120 + 52.4 0.000 promoter-TSS (NM_001243120) promoter-TSS (NM_001243120) -28 NM_001243120 6502 Hs.23348 NM_005983 ENSG00000145604 SKP2 FBL1|FBXL1|FLB1|p45 S-phase kinase associated protein 2 protein-coding chr7-100 chr7 155298950 155299160 + 52.4 0.000 intron (NM_198337, intron 2 of 3) intron (NM_198337, intron 2 of 3) 1177 NM_005542 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr10-23 chr10 132517208 132517418 + 52.4 0.000 intron (NR_158224, intron 2 of 3) intron (NR_158224, intron 2 of 3) 19610 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr11-198 chr11 65492029 65492239 + 52.3 0.000 Intergenic Intergenic -5604 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 ncRNA chr5-101 chr5 178204332 178204542 + 52.3 0.000 promoter-TSS (NM_004499) promoter-TSS (NM_004499) -96 NM_004499 3182 Hs.591731 NM_004499 ENSG00000197451 HNRNPAB ABBP1|HNRPAB heterogeneous nuclear ribonucleoprotein A/B protein-coding chr11-148 chr11 46846183 46846393 + 52.3 0.000 promoter-TSS (NR_038909) promoter-TSS (NR_038909) -8 NM_001008938 9793 Hs.201253 NM_014756 ENSG00000175216 CKAP5 CHTOG|MSPS|TOG|TOGp|ch-TOG cytoskeleton associated protein 5 protein-coding chr10-72 chr10 580850 581060 + 52.3 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -47609 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr14-41 chr14 77320976 77321186 + 52.3 0.000 promoter-TSS (NM_145870) promoter-TSS (NM_145870) 45 NM_145871 2954 Hs.655292 NM_001513 ENSG00000100577 GSTZ1 GSTZ1-1|MAAI|MAAID|MAI glutathione S-transferase zeta 1 protein-coding chr5-124 chr5 146203341 146203551 + 52.3 0.000 promoter-TSS (NM_018989) promoter-TSS (NM_018989) -159 NM_018989 54439 Hs.61441 NM_018989 ENSG00000091009 RBM27 ARRS1|Psc1|ZC3H18|ZC3H20 RNA binding motif protein 27 protein-coding chr9-47 chr9 129885776 129885986 + 52.3 0.000 Intergenic CpG 16276 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr5-46 chr5 176388724 176388934 + 52.3 0.000 promoter-TSS (NM_001317975) promoter-TSS (NM_001317975) 78 NM_138820 192286 Hs.534575 NM_138820 ENSG00000146066 HIGD2A RCF1b HIG1 hypoxia inducible domain family member 2A protein-coding chr10-118 chr10 94123391 94123601 + 52.3 0.000 intron (NM_001165979, intron 1 of 31) intron (NM_001165979, intron 1 of 31) -14702 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr11-138 chr11 118887801 118888011 + 52.2 0.000 intron (NM_001716, intron 1 of 1) intron (NM_001716, intron 1 of 1) 4014 NM_001716 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr11-69 chr11 74493194 74493404 + 52.2 0.000 promoter-TSS (NM_001319240) promoter-TSS (NM_001319240) -86 NM_001319240 100287896 Hs.591971 NM_198519 LOC100287896 - uncharacterized LOC100287896 protein-coding chr11-172 chr11 67482789 67482999 + 52.2 0.000 promoter-TSS (NM_003977) promoter-TSS (NM_003977) -132 NM_003977 9049 Hs.412433 NM_003977 ENSG00000110711 AIP ARA9|FKBP16|FKBP37|PITA1|SMTPHN|XAP-2|XAP2 aryl hydrocarbon receptor interacting protein protein-coding chr17-104 chr17 82876727 82876937 + 52.2 0.000 intron (NM_005993, intron 14 of 38) intron (NM_005993, intron 14 of 38) -36810 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr19-266 chr19 2740011 2740221 + 52.2 0.000 promoter-TSS (NM_213568) promoter-TSS (NM_213568) -40 NM_213568 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr9-44 chr9 128635409 128635619 + 52.1 0.000 intron (NM_052844, intron 5 of 8) intron (NM_052844, intron 5 of 8) 21336 NM_052844 89891 Hs.495240 NM_052844 ENSG00000119333 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding chr12-60 chr12 53500801 53501011 + 52.1 0.000 promoter-TSS (NM_004178) promoter-TSS (NM_004178) -15 NM_004178 6895 Hs.326 NM_004178 ENSG00000139546 TARBP2 LOQS|TRBP|TRBP1|TRBP2 TARBP2 subunit of RISC loading complex protein-coding chr19-159 chr19 51367593 51367803 + 52.1 0.000 intron (NM_152353, intron 2 of 3) CpG-15033 1305 NM_152353 125875 Hs.720536 NM_152353 ENSG00000160318 CLDND2 - claudin domain containing 2 protein-coding chr2-54 chr2 170928969 170929179 + 52.1 0.000 promoter-TSS (NM_015530) promoter-TSS (NM_015530) -179 NM_015530 26003 Hs.431317 NM_015530 ENSG00000115806 GORASP2 GOLPH6|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding chr7-44 chr7 158704882 158705092 + 52.1 0.000 promoter-TSS (NM_001281933) promoter-TSS (NM_001281933) -183 NM_001281933 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr5-49 chr5 10441580 10441790 + 52.1 0.000 promoter-TSS (NM_031916) promoter-TSS (NM_031916) 166 NR_102746 100505845 Hs.599395 NR_102746 ROPN1L-AS1 - ROPN1L antisense RNA 1 ncRNA chr2-159 chr2 98560324 98560534 + 52.1 0.000 intron (NM_001351428, intron 17 of 24) intron (NM_001351428, intron 17 of 24) 48083 NM_001008215 493753 Hs.596537 NM_001008215 ENSG00000183513 COA5 6330578E17Rik|C2orf64|CEMCOX3|Pet191 cytochrome c oxidase assembly factor 5 protein-coding chr10-41 chr10 3172758 3172968 + 52.1 0.000 promoter-TSS (NM_014889) promoter-TSS (NM_014889) -22 NM_001242307 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding chr12-98 chr12 57547149 57547359 + 52.1 0.000 promoter-TSS (NR_145419) promoter-TSS (NR_145419) 77 NR_145419 10540 Hs.289123 NM_006400 ENSG00000175203 DCTN2 DCTN50|DYNAMITIN|HEL-S-77|RBP50 dynactin subunit 2 protein-coding chr11-84 chr11 66267458 66267668 + 52.1 0.000 3' UTR (NM_001134774, exon 15 of 15) 3' UTR (NM_001134774, exon 15 of 15) -1076 NM_030981 81876 Hs.300816 NM_030981 ENSG00000174903 RAB1B - RAB1B, member RAS oncogene family protein-coding chr10-119 chr10 43129456 43129666 + 52.1 0.000 3' UTR (NM_020975, exon 20 of 20) 3' UTR (NM_020975, exon 20 of 20) -8884 NM_018590 55454 Hs.657569 NM_018590 ENSG00000169826 CSGALNACT2 CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding chr1-323 chr1 40531536 40531746 + 52.1 0.000 promoter-TSS (NM_152373) promoter-TSS (NM_152373) 4 NM_152373 127396 Hs.524767 NM_152373 ENSG00000117010 ZNF684 - zinc finger protein 684 protein-coding chr1-59 chr1 2133318 2133528 + 52.1 0.000 intron (NM_001033582, intron 1 of 14) CpG 28707 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr1-191 chr1 30824322 30824532 + 52.1 0.000 promoter-TSS (NR_146732) promoter-TSS (NR_146732) -225 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr1-94 chr1 28552918 28553128 + 52.1 0.000 promoter-TSS (NR_003109) promoter-TSS (NR_003109) 6 NR_003109 54952 Hs.533626 NM_017846 ENSG00000180098 TRNAU1AP PRO1902|SECP43|TRSPAP1 tRNA selenocysteine 1 associated protein 1 protein-coding chr17-166 chr17 7688212 7688422 + 52.0 0.000 promoter-TSS (NM_000546) promoter-TSS (NM_000546) -32 NM_018081 55135 Hs.408312 NM_018081 ENSG00000141499 WRAP53 DKCB3|TCAB1|WDR79 WD repeat containing antisense to TP53 protein-coding chr1-152 chr1 226939991 226940201 + 52.0 0.000 promoter-TSS (NM_020247) promoter-TSS (NM_020247) -198 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr5-92 chr5 148913130 148913340 + 52.0 0.000 Intergenic Intergenic 86642 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr19-228 chr19 55654141 55654351 + 52.0 0.000 5' UTR (NM_007279, exon 1 of 12) 5' UTR (NM_007279, exon 1 of 12) 196 NM_001012478 11338 Hs.528007 NM_007279 ENSG00000063244 U2AF2 U2AF65 U2 small nuclear RNA auxiliary factor 2 protein-coding chr14-49 chr14 54509696 54509906 + 52.0 0.000 promoter-TSS (NM_006568) promoter-TSS (NM_006568) -105 NM_006568 10668 Hs.59106 NM_006568 ENSG00000100532 CGRRF1 CGR19|RNF197 cell growth regulator with ring finger domain 1 protein-coding chr10-189 chr10 110706803 110707013 + 52.0 0.000 intron (NM_001134363, intron 1 of 13) intron (NM_001134363, intron 1 of 13) 62572 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr22-48 chr22 20858798 20859008 + 52.0 0.000 promoter-TSS (NM_001362863) promoter-TSS (NM_001362863) -91 NM_001362862 5297 Hs.529438 NM_002650 ENSG00000241973 PI4KA PI4K-ALPHA|PIK4CA|PMGYCHA|pi4K230 phosphatidylinositol 4-kinase alpha protein-coding chr10-68 chr10 79399533 79399743 + 52.0 0.000 intron (NM_153367, intron 2 of 3) MIR3|SINE|MIR 45986 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr1-98 chr1 66924847 66925057 + 52.0 0.000 promoter-TSS (NM_207014) promoter-TSS (NM_207014) -38 NM_001146112 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr19-217 chr19 36054338 36054548 + 52.0 0.000 promoter-TSS (NM_173636) promoter-TSS (NM_173636) -158 NM_152658 199745 Hs.350209 NM_152658 ENSG00000161277 THAP8 - THAP domain containing 8 protein-coding chr19-341 chr19 28705143 28705353 + 51.8 0.000 intron (NR_110759, intron 5 of 9) intron (NR_110759, intron 5 of 9) 22446 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr11-131 chr11 75554525 75554735 + 51.8 0.000 Intergenic Intergenic -7623 NM_001207014 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr3-62 chr3 196568623 196568833 + 51.8 0.000 promoter-TSS (NM_001345917) promoter-TSS (NM_001345917) -54 NM_001345913 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr10-124 chr10 15084576 15084786 + 51.8 0.000 intron (NM_001039844, intron 1 of 3) MER51A|LTR|ERV1 4095 NM_001039844 414149 NM_001039844 ENSG00000176244 ACBD7 bA455B2.2 acyl-CoA binding domain containing 7 protein-coding chr10-44 chr10 102714355 102714565 + 51.8 0.000 promoter-TSS (NR_146992) promoter-TSS (NR_146992) -58 NR_146992 118980 Hs.44070 NM_178858 ENSG00000156398 SFXN2 SLC56A2 sideroflexin 2 protein-coding chr5-55 chr5 149960550 149960760 + 51.8 0.000 promoter-TSS (NM_000112) promoter-TSS (NM_000112) -82 NM_000112 1836 Hs.302738 NM_000112 ENSG00000155850 SLC26A2 D5S1708|DTD|DTDST|EDM4|MST153|MSTP157 solute carrier family 26 member 2 protein-coding chr2-42 chr2 240586424 240586634 + 51.8 0.000 promoter-TSS (NR_103792) promoter-TSS (NR_103792) -205 NM_023083 11132 Hs.728234 NM_021251 ENSG00000142330 CAPN10 CANP10|NIDDM1 calpain 10 protein-coding chr16-101 chr16 2047741 2047951 + 51.7 0.000 promoter-TSS (NM_001363528) promoter-TSS (NM_001363528) -12 NM_002528 4913 Hs.66196 NM_002528 ENSG00000065057 NTHL1 FAP3|NTH1|OCTS3|hNTH1 nth like DNA glycosylase 1 protein-coding chr4-44 chr4 51842871 51843081 + 51.7 0.000 promoter-TSS (NM_001287757) promoter-TSS (NM_001287757) -24 NM_015115 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr19-169 chr19 3762588 3762798 + 51.7 0.000 promoter-TSS (NM_172251) promoter-TSS (NM_172251) 11 NM_172251 116541 Hs.356578 NM_172251 ENSG00000183617 MRPL54 L54mt|MRP-L54 mitochondrial ribosomal protein L54 protein-coding chr17-73 chr17 8630834 8631044 + 51.7 0.000 promoter-TSS (NM_001256095) promoter-TSS (NM_001256095) -178 NM_001256095 4628 Hs.16355 NM_005964 ENSG00000133026 MYH10 NMMHC-IIB|NMMHCB myosin heavy chain 10 protein-coding chr3-103 chr3 172750524 172750734 + 51.7 0.000 promoter-TSS (NM_001349104) promoter-TSS (NM_001349104) -56 NM_001258316 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr7-75 chr7 92528529 92528739 + 51.7 0.000 promoter-TSS (NM_000466) promoter-TSS (NM_000466) -114 NM_001282678 5189 Hs.164682 NM_000466 ENSG00000127980 PEX1 HMLR1|PBD1A|PBD1B|ZWS|ZWS1 peroxisomal biogenesis factor 1 protein-coding chr17-100 chr17 7239665 7239875 + 51.7 0.000 promoter-TSS (NM_024297) promoter-TSS (NM_024297) -313 NM_001284517 79142 Hs.644724 NM_024297 ENSG00000040633 PHF23 hJUNE-1b PHD finger protein 23 protein-coding chr10-47 chr10 95561333 95561543 + 51.7 0.000 promoter-TSS (NM_024991) promoter-TSS (NM_024991) -67 NM_024991 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr3-38 chr3 125990379 125990589 + 51.7 0.000 Intergenic CpG 21306 NM_001012337 152015 Hs.663128 NM_001012337 ENSG00000114547 ROPN1B - rhophilin associated tail protein 1B protein-coding chr10-37 chr10 93458868 93459078 + 51.7 0.000 intron (NM_013451, intron 1 of 53) intron (NM_013451, intron 1 of 53) 23361 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr2-76 chr2 63588647 63588857 + 51.6 0.000 promoter-TSS (NM_015910) promoter-TSS (NM_015910) -211 NM_001316374 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chr16-135 chr16 2136072 2136282 + 51.6 0.000 promoter-TSS (NM_001009944) promoter-TSS (NM_001009944) -48 NR_037467 100500916 NR_037467 ENSG00000264397 MIR3180-5 mir-3180-5 microRNA 3180-5 ncRNA chr20-14 chr20 20712711 20712921 + 51.6 0.000 promoter-TSS (NM_020343) promoter-TSS (NM_020343) -172 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr5-18 chr5 171387551 171387761 + 51.6 0.000 promoter-TSS (NM_001355009) promoter-TSS (NM_001355009) -48 NR_149149 4869 Hs.557550 NM_002520 ENSG00000181163 NPM1 B23|NPM nucleophosmin 1 protein-coding chr6-18 chr6 122399399 122399609 + 51.6 0.000 promoter-TSS (NM_001135564) promoter-TSS (NM_001135564) -47 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr14-43 chr14 103334041 103334251 + 51.6 0.000 promoter-TSS (NM_001969) promoter-TSS (NM_001969) -91 NM_001969 1983 Hs.433702 NM_001969 ENSG00000100664 EIF5 EIF-5|EIF-5A eukaryotic translation initiation factor 5 protein-coding chr17-133 chr17 73311999 73312209 + 51.5 0.000 promoter-TSS (NM_012121) promoter-TSS (NM_012121) -103 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr1-91 chr1 202889079 202889289 + 51.5 0.000 promoter-TSS (NM_002871) promoter-TSS (NM_002871) -35 NM_002871 5877 Hs.90875 NM_002871 ENSG00000183155 RABIF MSS4|RASGFR3|RASGRF3 RAB interacting factor protein-coding chr19-259 chr19 45370608 45370818 + 51.5 0.000 promoter-TSS (NM_001130867) promoter-TSS (NM_001130867) -126 NM_001130867 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2, TFIIH core complex helicase subunit protein-coding chr7-113 chr7 133082074 133082284 + 51.5 0.000 promoter-TSS (NM_001317178) promoter-TSS (NM_001317178) -21 NM_001317177 54927 Hs.655010 NM_017812 ENSG00000106554 CHCHD3 MICOS19|MINOS3|Mic19|PPP1R22 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding chr17-101 chr17 28041542 28041752 + 51.5 0.000 Intergenic CpG -1030 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr22-86 chr22 37953399 37953609 + 51.5 0.000 promoter-TSS (NM_021974) promoter-TSS (NM_021974) 97 NM_032561 84645 Hs.517612 NM_032561 ENSG00000128346 C22orf23 EVG1|dJ1039K5.6 chromosome 22 open reading frame 23 protein-coding chr14-106 chr14 20461510 20461720 + 51.5 0.000 promoter-TSS (NM_001100814) promoter-TSS (NM_001100814) -3 NM_001100814 90809 Hs.7001 NM_144568 ENSG00000165782 PIP4P1 C14orf9|TMEM55B phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 protein-coding chr1-114 chr1 15703713 15703923 + 51.5 0.000 intron (NM_015164, intron 1 of 19) intron (NM_015164, intron 1 of 19) 19498 NM_015164 23207 Hs.646775 NM_015164 ENSG00000116786 PLEKHM2 SKIP pleckstrin homology and RUN domain containing M2 protein-coding chr14-47 chr14 35826171 35826381 + 51.4 0.000 promoter-TSS (NM_032352) promoter-TSS (NM_032352) -62 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr13-27 chr13 76149044 76149254 + 51.4 0.000 Intergenic Intergenic -214017 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr2-96 chr2 128563435 128563645 + 51.4 0.000 Intergenic Intergenic -244672 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr2-74 chr2 24793162 24793372 + 51.4 0.000 promoter-TSS (NR_136184) promoter-TSS (NR_136184) 115 NM_001013663 391356 Hs.406607 NM_001013663 ENSG00000184924 PTRHD1 C2orf79 peptidyl-tRNA hydrolase domain containing 1 protein-coding chr22-80 chr22 19144621 19144831 + 51.3 0.000 promoter-TSS (NR_134304) promoter-TSS (NR_134304) -75 NM_022719 8220 Hs.517407 NM_022719 ENSG00000100056 ESS2 DGCR13|DGCR14|DGS-H|DGS-I|DGSH|DGSI|ES2|ESS-2|Es2el|bis1 ess-2 splicing factor homolog protein-coding chr7-177 chr7 64563041 64563251 + 51.3 0.000 promoter-TSS (NM_178558) promoter-TSS (NM_178558) -19 NM_001130022 340252 Hs.520886 NM_178558 ENSG00000173041 ZNF680 - zinc finger protein 680 protein-coding chr11-150 chr11 106022309 106022519 + 51.3 0.000 promoter-TSS (NM_032424) promoter-TSS (NM_032424) -127 NM_001318747 84437 Hs.266782 NM_032424 ENSG00000170903 MSANTD4 KIAA1826 Myb/SANT DNA binding domain containing 4 with coiled-coils protein-coding KI270879.1-1 KI270879.1 278457 278667 + 51.3 0.000 NA NA NA NA chr22-71 chr22 42070774 42070984 + 51.3 0.000 promoter-TSS (NM_001362850) promoter-TSS (NM_001362850) -37 NM_001362850 4668 Hs.75372 NM_000262 ENSG00000198951 NAGA D22S674|GALB alpha-N-acetylgalactosaminidase protein-coding chr4-120 chr4 121785116 121785326 + 51.3 0.000 Intergenic Intergenic -16102 NM_005033 5393 Hs.91728 NM_005033 ENSG00000123737 EXOSC9 PCH1D|PM/Scl-75|PMSCL1|RRP45|Rrp45p|p5|p6 exosome component 9 protein-coding chr19-128 chr19 2900684 2900894 + 51.3 0.000 promoter-TSS (NM_173480) promoter-TSS (NM_173480) -139 NM_173480 126295 Hs.591378 NM_173480 ENSG00000171970 ZNF57 ZNF424 zinc finger protein 57 protein-coding chr11-179 chr11 72353008 72353218 + 51.3 0.000 intron (NM_030813, intron 6 of 16) intron (NM_030813, intron 6 of 16) 81418 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr10-53 chr10 99659259 99659469 + 51.1 0.000 promoter-TSS (NM_001349963) promoter-TSS (NM_001349963) -145 NM_001349962 57089 Hs.28326 NM_020354 ENSG00000198018 ENTPD7 LALP1 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding chr7-50 chr7 1912748 1912958 + 51.1 0.000 intron (NM_001013837, intron 17 of 18) intron (NM_001013837, intron 17 of 18) 27718 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr3-91 chr3 75641128 75641338 + 51.1 0.000 Intergenic Intergenic 10470 NR_031714 100302212 NR_031714 ENSG00000283894 MIR1324 MIRN1324|hsa-mir-1324 microRNA 1324 ncRNA chr11-223 chr11 66694865 66695075 + 51.1 0.000 intron (NM_006946, intron 20 of 36) LTR41C|LTR|ERVL -17083 NM_001286135 83759 Hs.618713 NM_031492 ENSG00000173914 RBM4B RBM30|RBM4L|ZCCHC15|ZCCHC21B|ZCRB3B RNA binding motif protein 4B protein-coding chr22-91 chr22 45511992 45512202 + 51.1 0.000 intron (NM_006487, intron 1 of 14) intron (NM_006487, intron 1 of 14) 9214 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr11-111 chr11 36455949 36456159 + 51.1 0.000 intron (NM_001160167, intron 8 of 8) intron (NM_001160167, intron 8 of 8) 54218 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr6-53 chr6 158644813 158645023 + 51.1 0.000 promoter-TSS (NM_006519) promoter-TSS (NM_006519) -175 NM_006519 6993 Hs.445999 NM_006519 ENSG00000146425 DYNLT1 CW-1|TCTEL1|tctex-1 dynein light chain Tctex-type 1 protein-coding chr19-143 chr19 11559154 11559364 + 51.0 0.000 promoter-TSS (NM_032377) promoter-TSS (NM_032377) -23 NM_032377 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding chr9-164 chr9 123562979 123563189 + 51.0 0.000 intron (NM_001352968, intron 11 of 18) intron (NM_001352968, intron 11 of 18) -77462 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr15-27 chr15 100602242 100602452 + 51.0 0.000 promoter-TSS (NM_001040616) promoter-TSS (NM_001040616) -163 NM_001352507 55180 Hs.105633 NM_018148 ENSG00000140471 LINS1 LINS|MRT27|WINS1 lines homolog 1 protein-coding chr2-91 chr2 30113694 30113904 + 51.0 0.000 Intergenic Intergenic -33208 NM_016061 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr10-57 chr10 113666019 113666229 + 51.0 0.000 Intergenic Intergenic -2054 NM_006175 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr19-313 chr19 44304909 44305119 + 51.0 0.000 promoter-TSS (NM_004234) promoter-TSS (NM_004234) 11 NM_004234 9310 Hs.613424 NM_004234 ENSG00000159917 ZNF235 ANF270|HZF6|ZFP93|ZNF270 zinc finger protein 235 protein-coding chr10-52 chr10 98361094 98361304 + 51.0 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 34108 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr1-190 chr1 179882281 179882491 + 51.0 0.000 5' UTR (NM_015602, exon 1 of 10) 5' UTR (NM_015602, exon 1 of 10) 344 NM_015602 26092 Hs.496459 NM_015602 ENSG00000143337 TOR1AIP1 LAP1|LAP1B|LGMD2Y torsin 1A interacting protein 1 protein-coding chr7-155 chr7 102117798 102118008 + 51.0 0.000 intron (NM_001913, intron 8 of 22) intron (NM_001913, intron 8 of 22) -167238 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr1-264 chr1 85062122 85062332 + 50.9 0.000 promoter-TSS (NM_145172) promoter-TSS (NM_145172) -71 NM_001288563 126820 Hs.97933 NM_145172 ENSG00000162643 WDR63 DIC3|NYD-SP29 WD repeat domain 63 protein-coding chr3-94 chr3 64239065 64239275 + 50.9 0.000 intron (NM_001370528, intron 1 of 7) intron (NM_001370528, intron 1 of 7) -13704 NM_198859 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr10-45 chr10 124801658 124801868 + 50.9 0.000 promoter-TSS (NM_032182) promoter-TSS (NM_032182) -56 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr7-102 chr7 4725366 4725576 + 50.9 0.000 intron (NM_001037165, intron 1 of 8) CpG 43176 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr13-41 chr13 27043056 27043266 + 50.9 0.000 Intergenic Intergenic -82372 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr19-256 chr19 17108136 17108346 + 50.9 0.000 intron (NM_001130065, intron 2 of 39) intron (NM_001130065, intron 2 of 39) 16006 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chr3-75 chr3 114056326 114056536 + 50.9 0.000 promoter-TSS (NM_020817) promoter-TSS (NM_020817) 95 NM_020817 57577 Hs.477159 NM_020817 ENSG00000163617 CCDC191 KIAA1407 coiled-coil domain containing 191 protein-coding chr4-45 chr4 10116738 10116948 + 50.9 0.000 promoter-TSS (NM_005112) promoter-TSS (NM_005112) -44 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr19-138 chr19 43575597 43575807 + 50.9 0.000 promoter-TSS (NM_006297) promoter-TSS (NM_006297) -124 NM_006297 7515 Hs.98493 NM_006297 ENSG00000073050 XRCC1 RCC|SCAR26 X-ray repair cross complementing 1 protein-coding chr1-115 chr1 32964787 32964997 + 50.8 0.000 promoter-TSS (NM_001127361) promoter-TSS (NM_001127361) -83 NM_001127361 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chr12-95 chr12 96219866 96220076 + 50.8 0.000 intron (NM_005230, intron 1 of 4) intron (NM_005230, intron 1 of 4) 25596 NM_005230 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr3-53 chr3 32685099 32685309 + 50.7 0.000 promoter-TSS (NM_015442) promoter-TSS (NM_015442) 16 NR_046352 25904 Hs.444851 NM_015442 ENSG00000182973 CNOT10 - CCR4-NOT transcription complex subunit 10 protein-coding chr19-65 chr19 1863741 1863951 + 50.7 0.000 promoter-TSS (NM_031918) promoter-TSS (NM_031918) -267 NM_031918 83855 Hs.136280 NM_031918 ENSG00000129911 KLF16 BTEB4|DRRF|NSLP2 Kruppel like factor 16 protein-coding chr11-145 chr11 809321 809531 + 50.7 0.000 promoter-TSS (NM_001004) promoter-TSS (NM_001004) -541 NM_001004 6181 Hs.437594 NM_001004 ENSG00000177600 RPLP2 D11S2243E|LP2|P2|RPP2 ribosomal protein lateral stalk subunit P2 protein-coding chr19-172 chr19 45863163 45863373 + 50.7 0.000 promoter-TSS (NM_004819) promoter-TSS (NM_004819) -121 NM_004819 8189 Hs.515475 NM_004819 ENSG00000125755 SYMPK SPK|SYM symplekin protein-coding chr6-11 chr6 53547997 53548207 + 50.7 0.000 Intergenic CpG -3001 NM_001197115 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr9-130 chr9 134739075 134739285 + 50.7 0.000 intron (NM_001278074, intron 11 of 65) intron (NM_001278074, intron 11 of 65) -86337 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr10-61 chr10 130111227 130111437 + 50.7 0.000 promoter-TSS (NR_034125) promoter-TSS (NR_034125) -502 NM_001355042 387723 Hs.127394 NM_001355042 ENSG00000237489 C10orf143 LINC00959 chromosome 10 open reading frame 143 protein-coding chr10-54 chr10 132666082 132666292 + 50.7 0.000 intron (NM_005539, intron 4 of 15) intron (NM_005539, intron 4 of 15) -15088 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr16-109 chr16 29811290 29811500 + 50.7 0.000 promoter-TSS (NM_145239) promoter-TSS (NM_145239) -798 NM_145239 112476 Hs.655071 NM_145239 ENSG00000167371 PRRT2 BFIC2|BFIS2|DSPB3|DYT10|EKD1|FICCA|ICCA|IFITMD1|PKC proline rich transmembrane protein 2 protein-coding chr9-137 chr9 134552040 134552250 + 50.7 0.000 Intergenic Intergenic -89660 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr12-65 chr12 7018641 7018851 + 50.5 0.000 promoter-TSS (NM_005768) promoter-TSS (NM_005768) -270 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr19-246 chr19 2169040 2169250 + 50.5 0.000 intron (NM_032482, intron 1 of 27) intron (NM_032482, intron 1 of 27) 5212 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr3-32 chr3 47824821 47825031 + 50.5 0.000 intron (NM_014966, intron 5 of 22) CpG 21788 NM_138615 22907 Hs.517948 NM_014966 ENSG00000132153 DHX30 DDX30|NEDMIAL|RETCOR DExH-box helicase 30 protein-coding chr19-215 chr19 1605760 1605970 + 50.5 0.000 promoter-TSS (NM_006830) promoter-TSS (NM_006830) -403 NM_006830 10975 Hs.8372 NM_006830 ENSG00000127540 UQCR11 0710008D09Rik|QCR10|UQCR ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding chr19-118 chr19 1415525 1415735 + 50.5 0.000 intron (NM_001352035, intron 1 of 10) intron (NM_001352035, intron 1 of 10) 8044 NM_001352035 26528 Hs.222510 NM_018959 ENSG00000071626 DAZAP1 - DAZ associated protein 1 protein-coding KI270804.1-1 KI270804.1 105151 105361 + 50.5 0.000 NA NA NA NA chr22-116 chr22 50366598 50366808 + 50.5 0.000 intron (NM_001242899, intron 1 of 22) L1MEc|LINE|L1 23376 NM_001242898 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr14-73 chr14 24442672 24442882 + 50.5 0.000 promoter-TSS (NM_001290293) promoter-TSS (NM_001290293) 24 NM_020195 56948 Hs.643552 NM_020195 ENSG00000100445 SDR39U1 C14orf124|HCDI short chain dehydrogenase/reductase family 39U member 1 protein-coding chr2-164 chr2 12588305 12588515 + 50.5 0.000 Intergenic MER44B|DNA|TcMar-Tigger -128462 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr20-6 chr20 44885425 44885635 + 50.5 0.000 promoter-TSS (NM_139323) promoter-TSS (NM_139323) -175 NM_139323 7529 Hs.643544 NM_003404 ENSG00000166913 YWHAB GW128|HEL-S-1|HS1|KCIP-1|YWHAA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta protein-coding chr10-49 chr10 110501196 110501406 + 50.5 0.000 intron (NM_004419, intron 1 of 3) intron (NM_004419, intron 1 of 3) 3394 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr3-41 chr3 128617676 128617886 + 50.4 0.000 Intergenic CpG 33037 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chr7-48 chr7 10973635 10973845 + 50.4 0.000 promoter-TSS (NM_014660) promoter-TSS (NM_014660) -132 NM_014660 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr15-50 chr15 85380237 85380447 + 50.4 0.000 promoter-TSS (NR_106993) promoter-TSS (NR_106993) -254 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr7-43 chr7 21428107 21428317 + 50.4 0.000 non-coding (NR_137166, exon 1 of 2) non-coding (NR_137166, exon 1 of 2) 129 NM_003112 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr5-117 chr5 40835216 40835426 + 50.4 0.000 promoter-TSS (NM_000997) promoter-TSS (NM_000997) -99 NM_000997 6167 Hs.80545 NM_000997 ENSG00000145592 RPL37 L37 ribosomal protein L37 protein-coding chr5-158 chr5 154771466 154771676 + 50.4 0.000 intron (NM_001367719, intron 1 of 18) intron (NM_001367719, intron 1 of 18) 14417 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr19-148 chr19 17075448 17075658 + 50.3 0.000 promoter-TSS (NM_033417) promoter-TSS (NM_033417) -20 NM_001011699 93323 Hs.404088 NM_033417 ENSG00000131351 HAUS8 DGT4|HICE1|NY-SAR-48 HAUS augmin like complex subunit 8 protein-coding chr21-22 chr21 14027200 14027410 + 50.3 0.000 Intergenic Intergenic -46861 NR_027270 391267 Hs.364456 NM_153750 ENSG00000215559 ANKRD20A11P C21orf81 ankyrin repeat domain 20 family member A11, pseudogene pseudo chr21-20 chr21 45228366 45228576 + 50.2 0.000 Intergenic MER63C|DNA|hAT-Blackjack -5869 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr7-136 chr7 130921439 130921649 + 50.2 0.000 non-coding (NR_109780, exon 4 of 4) non-coding (NR_109780, exon 4 of 4) 8080 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr1-170 chr1 27536841 27537051 + 50.2 0.000 intron (NM_001029882, intron 6 of 6) intron (NM_001029882, intron 6 of 6) -46779 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr1-79 chr1 11980070 11980280 + 50.2 0.000 promoter-TSS (NM_014874) promoter-TSS (NM_014874) -6 NM_014874 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr1-360 chr1 230900043 230900253 + 50.2 0.000 Intergenic Intergenic 25302 NR_110681 101927604 Hs.638929 NR_110681 ENSG00000223393 LOC101927604 - uncharacterized LOC101927604 ncRNA chr21-4 chr21 36156429 36156639 + 50.2 0.000 promoter-TSS (NM_001320714) promoter-TSS (NM_001320714) -226 NR_038894 100506428 Hs.651214 NR_038892 ENSG00000236830 CBR3-AS1 PlncRNA-1|PlncRNA1 CBR3 antisense RNA 1 ncRNA chr3-49 chr3 51942005 51942215 + 50.2 0.000 promoter-TSS (NM_005485) promoter-TSS (NM_005485) -195 NM_001003931 10039 Hs.271742 NM_005485 ENSG00000041880 PARP3 ADPRT3|ADPRTL2|ADPRTL3|ARTD3|IRT1|PADPRT-3 poly(ADP-ribose) polymerase family member 3 protein-coding chr1-154 chr1 31296838 31297048 + 50.2 0.000 promoter-TSS (NM_004814) promoter-TSS (NM_004814) -39 NM_001282566 51538 Hs.524094 NM_016505 ENSG00000121766 ZCCHC17 HSPC251|PS1D|pNO40 zinc finger CCHC-type containing 17 protein-coding chr2-107 chr2 239226226 239226436 + 50.2 0.000 intron (NM_006037, intron 3 of 26) intron (NM_006037, intron 3 of 26) -30874 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr3-48 chr3 48635517 48635727 + 50.2 0.000 promoter-TSS (NM_134426) promoter-TSS (NM_134426) -161 NM_001281733 65010 Hs.631925 NM_022911 ENSG00000225697 SLC26A6 - solute carrier family 26 member 6 protein-coding chr21-14 chr21 42496283 42496493 + 50.1 0.000 promoter-TSS (NM_001286506) promoter-TSS (NM_001286506) -151 NR_135518 101930094 Hs.670903 NR_135518 ENSG00000239930 LOC101930094 - uncharacterized LOC101930094 ncRNA chr14-48 chr14 21456085 21456295 + 50.1 0.000 promoter-TSS (NM_001170629) promoter-TSS (NM_001170629) -67 NM_001170629 57680 Hs.530698 NM_020920 ENSG00000100888 CHD8 AUTS18|HELSNF1 chromodomain helicase DNA binding protein 8 protein-coding chr7-92 chr7 6009111 6009321 + 50.1 0.000 promoter-TSS (NM_001362787) promoter-TSS (NM_001362787) -29 NM_001326611 7965 Hs.301613 NM_006303 ENSG00000106305 AIMP2 HLD17|JTV-1|JTV1|P38 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 protein-coding chr11-91 chr11 207374 207584 + 50.1 0.000 promoter-TSS (NM_016526) promoter-TSS (NM_016526) -32 NM_001286134 60626 Hs.592292 NM_021932 ENSG00000177963 RIC8A RIC8 RIC8 guanine nucleotide exchange factor A protein-coding chr9-33 chr9 137070523 137070733 + 50.1 0.000 promoter-TSS (NM_178448) promoter-TSS (NM_178448) -71 NM_178448 89958 Hs.19322 NM_178448 ENSG00000186193 SAPCD2 C9orf140|p42.3 suppressor APC domain containing 2 protein-coding chr1-122 chr1 93180412 93180622 + 50.1 0.000 promoter-TSS (NM_206886) promoter-TSS (NM_206886) -104 NM_001167830 50999 Hs.482873 NM_016040 ENSG00000117500 TMED5 CGI-100|p24g2|p28 transmembrane p24 trafficking protein 5 protein-coding chr16-139 chr16 67055825 67056035 + 50.1 0.000 intron (NM_001368708, intron 3 of 4) intron (NM_001368708, intron 3 of 4) 26781 NM_001368710 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding chr2-155 chr2 152175504 152175714 + 50.1 0.000 exon (NM_005843, exon 1 of 14) exon (NM_005843, exon 1 of 14) 154 NM_005843 10254 Hs.17200 NM_005843 ENSG00000115145 STAM2 Hbp|STAM2A|STAM2B signal transducing adaptor molecule 2 protein-coding chr6-57 chr6 136822537 136822747 + 50.1 0.000 promoter-TSS (NM_000288) promoter-TSS (NM_000288) 50 NM_000288 5191 Hs.280932 NM_000288 ENSG00000112357 PEX7 PBD9B|PTS2R|RCDP1|RD peroxisomal biogenesis factor 7 protein-coding chr3-86 chr3 52154691 52154901 + 50.0 0.000 promoter-TSS (NM_001161580) promoter-TSS (NM_001161580) -373 NM_015426 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr15-33 chr15 59372739 59372949 + 50.0 0.000 promoter-TSS (NM_004998) promoter-TSS (NM_004998) 27 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr9-185 chr9 69175167 69175377 + 50.0 0.000 intron (NM_001369872, intron 1 of 21) LFSINE_Vert|SINE|tRNA 995 NM_001369873 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr17-173 chr17 7931951 7932161 + 50.0 0.000 promoter-TSS (NM_001037144) promoter-TSS (NM_001037144) -25 NM_001353207 116840 Hs.348012 NM_053051 ENSG00000170037 CNTROB LIP8|PP1221 centrobin, centriole duplication and spindle assembly protein protein-coding chr1-62 chr1 45750566 45750776 + 50.0 0.000 promoter-TSS (NM_005897) promoter-TSS (NM_005897) -18 NM_005897 3652 Hs.744252 NM_005897 ENSG00000197429 IPP KLHL27 intracisternal A particle-promoted polypeptide protein-coding chr12-118 chr12 109999126 109999336 + 50.0 0.000 promoter-TSS (NM_033121) promoter-TSS (NM_033121) -199 NM_033121 88455 Hs.528703 NM_033121 ENSG00000076513 ANKRD13A ANKRD13|NY-REN-25 ankyrin repeat domain 13A protein-coding chr2-173 chr2 120559510 120559720 + 50.0 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -93266 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr3-121 chr3 34012172 34012382 + 50.0 0.000 Intergenic Intergenic 213647 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr1-168 chr1 16904867 16905077 + 50.0 0.000 Intergenic CpG 8992 NR_004408 26869 NR_004408 ENSG00000207513 RNU1-3 HSD4|RNU1G3 RNA, U1 small nuclear 3 snRNA chr14-91 chr14 58244729 58244939 + 50.0 0.000 promoter-TSS (NM_152132) promoter-TSS (NM_152132) -9 NM_002788 5684 Hs.558799 NM_002788 ENSG00000100567 PSMA3 HC8|PSC3 proteasome subunit alpha 3 protein-coding chr12-78 chr12 101925436 101925646 + 49.8 0.000 Intergenic Intergenic 47961 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr22-85 chr22 19479498 19479708 + 49.8 0.000 promoter-TSS (NM_005659) promoter-TSS (NM_005659) 137 NM_001369291 8318 Hs.474217 NM_003504 ENSG00000093009 CDC45 CDC45L|CDC45L2|MGORS7|PORC-PI-1 cell division cycle 45 protein-coding chr20-12 chr20 64062903 64063113 + 49.8 0.000 promoter-TSS (NM_003195) promoter-TSS (NM_003195) -190 NM_003195 6919 Hs.505004 NM_003195 ENSG00000171703 TCEA2 TFIIS transcription elongation factor A2 protein-coding chr7-106 chr7 44848140 44848350 + 49.8 0.000 promoter-TSS (NM_201517) promoter-TSS (NM_201517) -119 NM_012412 94239 Hs.488189 NM_012412 ENSG00000105968 H2AFV H2A.Z-2|H2AV H2A histone family member V protein-coding chr5-47 chr5 80407711 80407921 + 49.8 0.000 promoter-TSS (NR_146173) promoter-TSS (NR_146173) -248 NR_146172 9765 Hs.482660 NM_014733 ENSG00000039319 ZFYVE16 PPP1R69 zinc finger FYVE-type containing 16 protein-coding chr15-56 chr15 44195162 44195372 + 49.8 0.000 promoter-TSS (NM_001322951) promoter-TSS (NM_001322951) 4 NM_001322950 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr15-51 chr15 99476618 99476828 + 49.8 0.000 Intergenic Intergenic -88694 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr2-52 chr2 25878504 25878714 + 49.8 0.000 promoter-TSS (NM_018263) promoter-TSS (NM_018263) -122 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr17-29 chr17 28645155 28645365 + 49.8 0.000 promoter-TSS (NM_001363828) promoter-TSS (NM_001363828) -101 NM_001363826 9703 Hs.151761 NM_014680 ENSG00000007202 KIAA0100 BCOX|BCOX1|CT101|FMP27 KIAA0100 protein-coding chr3-120 chr3 8955411 8955621 + 49.7 0.000 intron (NM_020165, intron 2 of 12) L1M3d|LINE|L1 7956 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr12-121 chr12 3170797 3171007 + 49.7 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 93523 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr17-125 chr17 77392053 77392263 + 49.7 0.000 intron (NM_001113494, intron 1 of 10) intron (NM_001113494, intron 1 of 10) 4896 NR_036200 100422851 NR_036200 ENSG00000264060 MIR4316 - microRNA 4316 ncRNA chr8-12 chr8 30083027 30083237 + 49.7 0.000 promoter-TSS (NM_001284239) promoter-TSS (NM_001284239) -68 NM_016127 51669 Hs.521487 NM_016127 ENSG00000133872 SARAF FOAP-7|HSPC035|TMEM66|XTP3 store-operated calcium entry associated regulatory factor protein-coding chr15-43 chr15 42920819 42921029 + 49.7 0.000 promoter-TSS (NM_173500) promoter-TSS (NM_173500) -146 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr9-150 chr9 128362067 128362277 + 49.7 0.000 TTS (NM_005094) TTS (NM_005094) -9147 NM_001265582 81605 Hs.495229 NM_030914 ENSG00000167118 URM1 C9orf74 ubiquitin related modifier 1 protein-coding chr11-96 chr11 65607058 65607268 + 49.6 0.000 intron (NM_002419, intron 5 of 9) intron (NM_002419, intron 5 of 9) 7058 NM_002419 4296 Hs.502872 NM_002419 ENSG00000173327 MAP3K11 MEKK11|MLK-3|MLK3|PTK1|SPRK mitogen-activated protein kinase kinase kinase 11 protein-coding chr16-153 chr16 9047790 9048000 + 49.6 0.000 Intergenic Intergenic -43749 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr1-225 chr1 100133068 100133278 + 49.6 0.000 promoter-TSS (NR_135078) promoter-TSS (NR_135078) 23 NR_135078 54482 Hs.729095 NM_019083 ENSG00000122435 TRMT13 CCDC76 tRNA methyltransferase 13 homolog protein-coding chr15-47 chr15 64381455 64381665 + 49.6 0.000 promoter-TSS (NM_014736) promoter-TSS (NM_014736) -119 NM_014736 9768 Hs.81892 NM_014736 ENSG00000166803 PCLAF KIAA0101|L5|NS5ATP9|OEATC|OEATC-1|OEATC1|PAF|PAF15|p15(PAF)|p15/PAF|p15PAF PCNA clamp associated factor protein-coding chr1-142 chr1 32013570 32013780 + 49.6 0.000 promoter-TSS (NM_006559) promoter-TSS (NM_006559) -193 NR_073498 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr2-97 chr2 68467306 68467516 + 49.6 0.000 promoter-TSS (NM_173545) promoter-TSS (NM_173545) -117 NR_133923 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding chr10-148 chr10 454934 455144 + 49.6 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -173525 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr9-61 chr9 134811651 134811861 + 49.6 0.000 intron (NM_001278074, intron 46 of 65) Tigger19b|DNA|TcMar-Tigger 37613 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr7-110 chr7 5513801 5514011 + 49.6 0.000 promoter-TSS (NM_001367781) promoter-TSS (NM_001367781) 52 NR_126168 221946 Hs.385633 NR_126168 LOC221946 - uncharacterized LOC221946 ncRNA chr4-90 chr4 183659094 183659304 + 49.6 0.000 promoter-TSS (NM_021942) promoter-TSS (NM_021942) -14 NM_152682 201965 Hs.133337 NM_152682 ENSG00000182552 RWDD4 FAM28A|RWDD4A RWD domain containing 4 protein-coding chr19-221 chr19 40798866 40799076 + 49.5 0.000 promoter-TSS (NM_053046) promoter-TSS (NM_053046) -220 NM_080732 112398 Hs.515417 NM_017555 ENSG00000269858 EGLN2 EIT-6|EIT6|HIF-PH1|HIFPH1|HPH-1|HPH-3|PHD1 egl-9 family hypoxia inducible factor 2 protein-coding chr1-183 chr1 5992404 5992614 + 49.5 0.000 promoter-TSS (NM_001291593) promoter-TSS (NM_001291593) -84 NM_015102 261734 Hs.462348 NM_015102 ENSG00000131697 NPHP4 POC10|SLSN4 nephrocystin 4 protein-coding chr18-14 chr18 11981096 11981306 + 49.5 0.000 promoter-TSS (NM_014214) promoter-TSS (NM_014214) -306 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr6-34 chr6 157380091 157380301 + 49.5 0.000 promoter-TSS (NM_153746) promoter-TSS (NM_153746) -994 NM_024630 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr19-255 chr19 58572875 58573085 + 49.5 0.000 non-coding (NR_027334, exon 6 of 6) non-coding (NR_027334, exon 6 of 6) 355 NM_001267033 7593 Hs.399810 NM_003422 ENSG00000099326 MZF1 MZF-1|MZF1B|ZFP98|ZNF42|ZSCAN6 myeloid zinc finger 1 protein-coding chr16-31 chr16 89874103 89874313 + 49.5 0.000 intron (NM_014972, intron 1 of 17) CpG 616 NM_014972 22980 Hs.415342 NM_014972 ENSG00000141002 TCF25 FKSG26|Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 protein-coding chr2-129 chr2 241680952 241681162 + 49.5 0.000 intron (NR_135492, intron 2 of 4) intron (NR_135492, intron 2 of 4) 5758 NM_012145 1841 Hs.471873 NM_012145 ENSG00000168393 DTYMK CDC8|PP3731|TMPK|TYMK deoxythymidylate kinase protein-coding chr5-59 chr5 144170645 144170855 + 49.5 0.000 promoter-TSS (NM_030799) promoter-TSS (NM_030799) -91 NM_001024947 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding chr15-29 chr15 89334875 89335085 + 49.5 0.000 promoter-TSS (NM_002693) promoter-TSS (NM_002693) -156 NM_001126131 5428 Hs.706868 NM_002693 ENSG00000140521 POLG MDP1|MIRAS|MTDPS4A|MTDPS4B|PEO|POLG1|POLGA|SANDO|SCAE DNA polymerase gamma, catalytic subunit protein-coding chr14-31 chr14 73950173 73950383 + 49.5 0.000 promoter-TSS (NM_182476) promoter-TSS (NM_182476) -24 NM_182476 51004 Hs.131555 NM_182476 ENSG00000119723 COQ6 CGI-10|CGI10|COQ10D6 coenzyme Q6, monooxygenase protein-coding chr21-17 chr21 39380246 39380456 + 49.5 0.000 promoter-TSS (NM_001317744) promoter-TSS (NM_001317744) 25 NM_001350300 106865373 Hs.473847 NM_001317744 ENSG00000285815 WRB-SH3BGR - WRB-SH3BGR readthrough protein-coding chr7-73 chr7 2633901 2634111 + 49.4 0.000 intron (NM_025250, intron 1 of 13) intron (NM_025250, intron 1 of 13) 2020 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr4-174 chr4 28287867 28288077 + 49.4 0.000 Intergenic Intergenic -531610 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr22-42 chr22 38205279 38205489 + 49.4 0.000 intron (NM_001161573, intron 1 of 2) intron (NM_001161573, intron 1 of 2) 2364 NM_001161573 23764 Hs.517617 NM_012323 ENSG00000185022 MAFF U-MAF|hMafF MAF bZIP transcription factor F protein-coding chr1-210 chr1 26999564 26999774 + 49.4 0.000 intron (NM_001013642, intron 1 of 1) intron (NM_001013642, intron 1 of 1) 5977 NM_001013642 388610 Hs.355747 NM_001013642 ENSG00000253368 TRNP1 C1orf225|TNRP|TRNP TMF1 regulated nuclear protein 1 protein-coding chr12-123 chr12 122318666 122318876 + 49.4 0.000 intron (NM_198240, intron 16 of 23) intron (NM_198240, intron 16 of 23) -52277 NM_001351021 65082 Hs.487883 NM_022916 ENSG00000139719 VPS33A MPSPS VPS33A core subunit of CORVET and HOPS complexes protein-coding chr21-6 chr21 43728605 43728815 + 49.4 0.000 intron (NM_003681, intron 1 of 10) CpG 9581 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr20-22 chr20 32475372 32475582 + 49.4 0.000 intron (NM_001256798, intron 4 of 10) intron (NM_001256798, intron 4 of 10) 8013 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr13-21 chr13 23701688 23701898 + 49.4 0.000 Intergenic Intergenic 122433 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr5-61 chr5 77492210 77492420 + 49.4 0.000 promoter-TSS (NM_018268) promoter-TSS (NM_018268) 1 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr15-44 chr15 83067229 83067439 + 49.3 0.000 promoter-TSS (NM_025238) promoter-TSS (NM_025238) -1 NR_039740 100616404 NR_039740 ENSG00000263643 MIR4515 mir-4515 microRNA 4515 ncRNA chr11-115 chr11 62574029 62574239 + 49.3 0.000 promoter-TSS (NM_001404) promoter-TSS (NM_001404) -243 NM_001404 1937 Hs.144835 NM_001404 ENSG00000254772 EEF1G EF1G|GIG35 eukaryotic translation elongation factor 1 gamma protein-coding chr14-88 chr14 63641888 63642098 + 49.3 0.000 promoter-TSS (NM_001008726) promoter-TSS (NM_001008726) -122 NM_080666 112840 Hs.655666 NM_080666 ENSG00000140006 WDR89 C14orf150|MSTP050 WD repeat domain 89 protein-coding chr1-123 chr1 1231975 1232185 + 49.3 0.000 promoter-TSS (NM_080605) promoter-TSS (NM_080605) -13 NM_016547 51150 Hs.42806 NM_016176 ENSG00000078808 SDF4 Cab45|SDF-4 stromal cell derived factor 4 protein-coding chr1-136 chr1 121184592 121184802 + 49.3 0.000 promoter-TSS (NM_001320149) promoter-TSS (NM_001320149) -278 NM_001271872 653464 Hs.497575 NM_001271872 ENSG00000171943 SRGAP2C SRGAP2P1 SLIT-ROBO Rho GTPase activating protein 2C protein-coding chr12-82 chr12 123633695 123633905 + 49.3 0.000 promoter-TSS (NM_001271868) promoter-TSS (NM_001271868) -29 NM_001271866 2967 Hs.355348 NM_001516 ENSG00000111358 GTF2H3 BTF2|P34|TFB4|TFIIH general transcription factor IIH subunit 3 protein-coding chr19-273 chr19 11798408 11798618 + 49.3 0.000 promoter-TSS (NM_152356) promoter-TSS (NM_152356) -10 NM_152356 126069 Hs.631634 NM_152356 ENSG00000177599 ZNF491 - zinc finger protein 491 protein-coding chr4-132 chr4 148007408 148007618 + 49.3 0.000 intron (NM_024605, intron 18 of 22) intron (NM_024605, intron 18 of 22) 224918 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr2-161 chr2 234911406 234911616 + 49.3 0.000 Intergenic Intergenic -40506 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr19-144 chr19 40348457 40348667 + 49.1 0.000 promoter-TSS (NM_001256441) promoter-TSS (NM_001256441) -35 NM_001256440 126526 Hs.631557 NM_178830 ENSG00000160392 C19orf47 - chromosome 19 open reading frame 47 protein-coding chr20-40 chr20 34303134 34303344 + 49.1 0.000 promoter-TSS (NM_001322084) promoter-TSS (NM_001322084) 116 NM_001362750 191 Hs.388004 NM_000687 ENSG00000101444 AHCY SAHH|adoHcyase adenosylhomocysteinase protein-coding chr4-91 chr4 187478870 187479080 + 49.1 0.000 intron (NR_038931, intron 1 of 4) intron (NR_038931, intron 1 of 4) 26638 NR_038931 339975 Hs.639361 NR_038931 LOC339975 - uncharacterized LOC339975 ncRNA chr5-38 chr5 58582930 58583140 + 49.1 0.000 promoter-TSS (NM_138453) promoter-TSS (NM_138453) -40 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr8-10 chr8 143246608 143246818 + 49.1 0.000 promoter-TSS (NM_173832) promoter-TSS (NM_173832) -226 NM_001271156 286128 Hs.668016 NM_173832 ENSG00000181638 ZFP41 ZNF753|zfp-41 ZFP41 zinc finger protein protein-coding chr19-189 chr19 47600389 47600599 + 49.1 0.000 Intergenic CpG -7702 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr5-57 chr5 131170745 131170955 + 49.1 0.000 promoter-TSS (NM_001293735) promoter-TSS (NM_001293735) -94 NM_181705 90624 Hs.115467 NM_181705 ENSG00000186687 LYRM7 C5orf31|MC3DN8|MZM1L LYR motif containing 7 protein-coding chr11-209 chr11 65366400 65366610 + 49.1 0.000 Intergenic Intergenic 11754 NM_145719 220359 Hs.632121 NM_145719 ENSG00000173825 TIGD3 - tigger transposable element derived 3 protein-coding chr1-163 chr1 36188055 36188265 + 49.1 0.000 Intergenic Intergenic 32000 NM_018067 55700 Hs.356096 NM_018067 ENSG00000116871 MAP7D1 PARCC1|RPRC1 MAP7 domain containing 1 protein-coding chr19-181 chr19 21141990 21142200 + 49.1 0.000 promoter-TSS (NM_133473) promoter-TSS (NM_133473) 55 NM_133473 170959 Hs.156256 NM_133473 ENSG00000196705 ZNF431 - zinc finger protein 431 protein-coding chr22-70 chr22 37887690 37887900 + 49.1 0.000 intron (NM_001242923, intron 10 of 10) intron (NM_001242923, intron 10 of 10) -18502 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr2-84 chr2 231412321 231412531 + 49.1 0.000 Intergenic CpG 16716 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr11-192 chr11 65572472 65572682 + 49.1 0.000 promoter-TSS (NM_001098784) promoter-TSS (NM_001098784) 39 NM_001098785 23625 Hs.731854 NM_152832 ENSG00000176973 FAM89B LRAP25|MTVR|MTVR1 family with sequence similarity 89 member B protein-coding chr9-122 chr9 127968789 127968999 + 49.1 0.000 intron (NM_001035254, intron 1 of 10) intron (NM_001035254, intron 1 of 10) 12095 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr9-57 chr9 120714580 120714790 + 49.0 0.000 promoter-TSS (NM_001080497) promoter-TSS (NM_001080497) -215 NM_001080497 1955 Hs.744903 NM_001080497 ENSG00000106780 MEGF9 EGFL5 multiple EGF like domains 9 protein-coding chr19-125 chr19 14496172 14496382 + 49.0 0.000 promoter-TSS (NM_202468) promoter-TSS (NM_202468) -128 NM_202494 10755 Hs.655012 NM_005716 ENSG00000123159 GIPC1 C19orf3|GIPC|GLUT1CBP|Hs.6454|IIP-1|NIP|RGS19IP1|SEMCAP|SYNECTIIN|SYNECTIN|TIP-2 GIPC PDZ domain containing family member 1 protein-coding chr4-87 chr4 337579 337789 + 49.0 0.000 promoter-TSS (NM_001348279) promoter-TSS (NM_001348279) -130 NM_001348279 7700 Hs.654355 NM_003441 ENSG00000131127 ZNF141 D4S90|pHZ-44 zinc finger protein 141 protein-coding chr19-323 chr19 41363987 41364197 + 49.0 0.000 promoter-TSS (NM_030578) promoter-TSS (NM_030578) 57 NM_030578 80776 Hs.567596 NM_030578 ENSG00000123810 B9D2 ICIS-1|JBTS34|MKS10|MKSR-2|MKSR2 B9 domain containing 2 protein-coding chr7-131 chr7 81484282 81484492 + 49.0 0.000 Intergenic L1M3b|LINE|L1 77432 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chr7-109 chr7 2082365 2082575 + 49.0 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) 6582 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr1-280 chr1 114780577 114780787 + 49.0 0.000 promoter-TSS (NM_001102396) promoter-TSS (NM_001102396) 3 NR_049741 80143 Hs.709277 NM_025073 ENSG00000052723 SIKE1 SIKE suppressor of IKBKE 1 protein-coding chr14-78 chr14 81170464 81170674 + 49.0 0.000 Intergenic L1P4a|LINE|L1 32265 NR_003021 677845 Hs.693251 NR_003021 ENSG00000221303 SNORA79 ACA65|SNORA79A small nucleolar RNA, H/ACA box 79 snoRNA chr17-117 chr17 21286383 21286593 + 48.9 0.000 intron (NM_145109, intron 1 of 11) intron (NM_145109, intron 1 of 11) -1548 NM_002756 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr1-140 chr1 156106335 156106545 + 48.9 0.000 intron (NM_001282625, intron 3 of 12) (CA)n|Simple_repeat|Simple_repeat -8230 NM_170708 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr3-148 chr3 14124867 14125077 + 48.9 0.000 promoter-TSS (NM_024334) promoter-TSS (NM_024334) 32 NM_024334 79188 Hs.517817 NM_024334 ENSG00000170876 TMEM43 ARVC5|ARVD5|EDMD7|LUMA transmembrane protein 43 protein-coding chr7-140 chr7 2863634 2863844 + 48.9 0.000 Intergenic Intergenic -19431 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr1-109 chr1 230978835 230979045 + 48.9 0.000 promoter-TSS (NM_001346992) promoter-TSS (NM_001346992) -79 NM_024525 79573 Hs.424788 NM_024525 ENSG00000143643 TTC13 - tetratricopeptide repeat domain 13 protein-coding chr17-121 chr17 77958367 77958577 + 48.9 0.000 Intergenic CpG -45765 NM_018996 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr11-76 chr11 910932 911142 + 48.9 0.000 promoter-TSS (NM_001142677) promoter-TSS (NM_001142677) -227 NM_001142676 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr11-79 chr11 77589625 77589835 + 48.9 0.000 promoter-TSS (NM_173039) promoter-TSS (NM_173039) 95 NM_001363477 282679 Hs.503345 NM_173039 ENSG00000178301 AQP11 AQPX1 aquaporin 11 protein-coding chr13-15 chr13 110706122 110706332 + 48.9 0.000 promoter-TSS (NM_001352253) promoter-TSS (NM_001352253) -111 NM_001352253 79587 Hs.508725 NM_024537 ENSG00000134905 CARS2 COXPD27|cysRS cysteinyl-tRNA synthetase 2, mitochondrial protein-coding chr5-73 chr5 146182527 146182737 + 48.8 0.000 promoter-TSS (NM_020117) promoter-TSS (NM_020117) 18 NM_020117 51520 Hs.432674 NM_016460 ENSG00000133706 LARS HSPC192|ILFS1|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl leucyl-tRNA synthetase protein-coding chr8-27 chr8 22585676 22585886 + 48.8 0.000 intron (NM_198042, intron 5 of 7) intron (NM_198042, intron 5 of 7) 5306 NM_176871 64236 Hs.632034 NM_021630 ENSG00000120913 PDLIM2 MYSTIQUE|SLIM PDZ and LIM domain 2 protein-coding chr8-16 chr8 22715750 22715960 + 48.8 0.000 intron (NM_001363233, intron 6 of 6) intron (NM_001363233, intron 6 of 6) -22375 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr22-72 chr22 30289595 30289805 + 48.8 0.000 promoter-TSS (NM_001037666) promoter-TSS (NM_001037666) -73 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 CASTOR1 GATSL3 cytosolic arginine sensor for mTORC1 subunit 1 protein-coding chr16-185 chr16 85570026 85570236 + 48.8 0.000 Intergenic Intergenic -41278 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr11-92 chr11 47176804 47177014 + 48.8 0.000 promoter-TSS (NM_032389) promoter-TSS (NM_032389) -30 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr2-66 chr2 32010802 32011012 + 48.8 0.000 promoter-TSS (NM_015955) promoter-TSS (NM_015955) 101 NM_001301833 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding chr8-115 chr8 23452650 23452860 + 48.8 0.000 intron (NM_004901, intron 1 of 12) intron (NM_004901, intron 1 of 12) 4892 NM_004901 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr2-132 chr2 130342693 130342903 + 48.7 0.000 promoter-TSS (NM_001321119) promoter-TSS (NM_001321119) -117 NR_104471 84317 Hs.104203 NM_032357 ENSG00000136710 CCDC115 CDG2O|ccp1 coiled-coil domain containing 115 protein-coding chr9-74 chr9 134778941 134779151 + 48.7 0.000 intron (NM_001278074, intron 27 of 65) intron (NM_001278074, intron 27 of 65) 70323 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr9-76 chr9 127699376 127699586 + 48.7 0.000 Intergenic CpG -7507 NR_145961 286207 Hs.652519 NM_001012502 ENSG00000160401 CFAP157 C9orf117 cilia and flagella associated protein 157 protein-coding chr7-230 chr7 112450177 112450387 + 48.7 0.000 promoter-TSS (NR_120333) promoter-TSS (NR_120333) -146 NM_001550 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr19-336 chr19 17337332 17337542 + 48.7 0.000 promoter-TSS (NM_032620) promoter-TSS (NM_032620) -116 NM_032620 84705 Hs.334885 NM_032620 ENSG00000130299 GTPBP3 COXPD23|GTPBG3|MSS1|MTGP1|THDF1 GTP binding protein 3, mitochondrial protein-coding chr7-188 chr7 132065765 132065975 + 48.7 0.000 Intergenic Intergenic 155650 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr7-133 chr7 66654302 66654512 + 48.7 0.000 promoter-TSS (NM_001367741) promoter-TSS (NM_001367741) -112 NR_110037 100996437 Hs.667408 NR_110037 LOC100996437 - uncharacterized LOC100996437 ncRNA chr9-63 chr9 136372583 136372793 + 48.7 0.000 intron (NM_052814, intron 1 of 12) intron (NM_052814, intron 1 of 12) 981 NM_052814 64170 Hs.694071 NM_052813 ENSG00000187796 CARD9 CANDF2|hCARD9 caspase recruitment domain family member 9 protein-coding chr22-109 chr22 26942437 26942647 + 48.5 0.000 Intergenic Intergenic 39250 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA chr15-35 chr15 40405600 40405810 + 48.5 0.000 promoter-TSS (NM_001354601) promoter-TSS (NM_001354601) -90 NM_001354598 3712 Hs.513646 NM_002225 ENSG00000128928 IVD ACAD2 isovaleryl-CoA dehydrogenase protein-coding chr8-48 chr8 117669747 117669957 + 48.5 0.000 Intergenic Intergenic 149139 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr9-45 chr9 35072035 35072245 + 48.5 0.000 5' UTR (NM_001354928, exon 1 of 17) 5' UTR (NM_001354928, exon 1 of 17) 168 NM_001354928 7415 Hs.529782 NM_007126 ENSG00000165280 VCP CDC48|TERA|p97 valosin containing protein protein-coding chr20-25 chr20 50724978 50725188 + 48.5 0.000 Intergenic L2c|LINE|L2 -6497 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr20-72 chr20 38472616 38472826 + 48.5 0.000 promoter-TSS (NM_001282918) promoter-TSS (NM_001282918) -122 NM_001282917 57148 Hs.598850 NM_020336 ENSG00000170471 RALGAPB KIAA1219|RalGAPbeta Ral GTPase activating protein non-catalytic beta subunit protein-coding chr15-38 chr15 43792017 43792227 + 48.5 0.000 promoter-TSS (NM_001018108) promoter-TSS (NM_001018108) 146 NM_001199876 10169 Hs.424126 NM_005770 ENSG00000140264 SERF2 4F5REL|FAM2C|H4F5REL|HsT17089 small EDRK-rich factor 2 protein-coding chr3-23 chr3 5187482 5187692 + 48.5 0.000 promoter-TSS (NM_014674) promoter-TSS (NM_014674) -120 NM_014674 9695 Hs.224616 NM_014674 ENSG00000134109 EDEM1 EDEM ER degradation enhancing alpha-mannosidase like protein 1 protein-coding chr1-144 chr1 40979718 40979928 + 48.5 0.000 non-coding (NR_125440, exon 1 of 18) non-coding (NR_125440, exon 1 of 18) 127 NM_001905 1503 Hs.473087 NM_001905 ENSG00000171793 CTPS1 CTPS|GATD5|IMD24 CTP synthase 1 protein-coding chr6-17 chr6 19836998 19837208 + 48.5 0.000 promoter-TSS (NM_001546) promoter-TSS (NM_001546) -267 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr10-78 chr10 71860458 71860668 + 48.4 0.000 Intergenic Intergenic -9312 NM_002778 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr6-39 chr6 118893913 118894123 + 48.4 0.000 promoter-TSS (NM_014034) promoter-TSS (NM_014034) -134 NM_014034 25842 Hs.292316 NM_014034 ENSG00000111875 ASF1A CGI-98|CIA|HSPC146 anti-silencing function 1A histone chaperone protein-coding chr17-134 chr17 17713919 17714129 + 48.4 0.000 intron (NM_030665, intron 1 of 5) L3|LINE|CR1 32566 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr9-82 chr9 83921330 83921540 + 48.4 0.000 promoter-TSS (NM_001354069) promoter-TSS (NM_001354069) -3 NM_001354070 55582 Hs.697514 NM_017576 ENSG00000165115 KIF27 - kinesin family member 27 protein-coding chr9-60 chr9 134055966 134056176 + 48.4 0.000 intron (NR_135126, intron 1 of 2) intron (NR_135126, intron 1 of 2) 1781 NR_135126 100130548 Hs.671096 NR_135126 ENSG00000235138 LOC100130548 - uncharacterized LOC100130548 ncRNA chr5-64 chr5 74316317 74316527 + 48.4 0.000 Intergenic Intergenic -6064 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chr9-89 chr9 133944824 133945034 + 48.4 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 47395 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr17-109 chr17 77409324 77409534 + 48.4 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) 4352 NM_001293696 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr6-96 chr6 36579808 36580018 + 48.4 0.000 Intergenic Intergenic -14400 NR_036610 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr10-21 chr10 133394046 133394256 + 48.4 0.000 promoter-TSS (NM_138384) promoter-TSS (NM_138384) -6 NM_138384 92170 Hs.501578 NM_138384 ENSG00000148824 MTG1 GTP|GTPBP7 mitochondrial ribosome associated GTPase 1 protein-coding chr19-135 chr19 58380874 58381084 + 48.4 0.000 promoter-TSS (NR_049780) promoter-TSS (NR_049780) 51 NR_049780 116412 Hs.222236 NM_138466 ENSG00000152475 ZNF837 - zinc finger protein 837 protein-coding chr1-219 chr1 42682144 42682354 + 48.3 0.000 promoter-TSS (NM_004559) promoter-TSS (NM_004559) -169 NM_004559 4904 Hs.473583 NM_004559 ENSG00000065978 YBX1 BP-8|CBF-A|CSDA2|CSDB|DBPB|EFI-A|MDR-NF1|NSEP-1|NSEP1|YB-1|YB1 Y-box binding protein 1 protein-coding chr11-147 chr11 65390650 65390860 + 48.3 0.000 intron (NM_001300833, intron 3 of 9) intron (NM_001300833, intron 3 of 9) 4118 NM_031904 83786 Hs.578433 NM_031904 ENSG00000126391 FRMD8 FKSG44|iTAP FERM domain containing 8 protein-coding chr9-65 chr9 134645058 134645268 + 48.3 0.000 intron (NM_001278074, intron 1 of 65) intron (NM_001278074, intron 1 of 65) 3358 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr19-287 chr19 2841289 2841499 + 48.3 0.000 promoter-TSS (NM_001172775) promoter-TSS (NM_001172775) -81 NM_001172775 148254 Hs.47712 NM_152791 ENSG00000186300 ZNF555 - zinc finger protein 555 protein-coding chr15-46 chr15 74598455 74598665 + 48.3 0.000 TTS (NM_006465) TTS (NM_006465) -9812 NM_003992 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr10-26 chr10 73096937 73097147 + 48.3 0.000 promoter-TSS (NM_001142595) promoter-TSS (NM_001142595) -68 NM_001017962 5033 Hs.500047 NM_000917 ENSG00000122884 P4HA1 P4HA prolyl 4-hydroxylase subunit alpha 1 protein-coding chr14-72 chr14 22589327 22589537 + 48.3 0.000 promoter-TSS (NM_001344) promoter-TSS (NM_001344) -208 NM_001344 1603 Hs.82890 NM_001344 ENSG00000129562 DAD1 OST2 defender against cell death 1 protein-coding chr12-84 chr12 10212274 10212484 + 48.3 0.000 promoter-TSS (NM_031412) promoter-TSS (NM_031412) -498 NM_001363598 23710 Hs.524250 NM_031412 ENSG00000139112 GABARAPL1 APG8-LIKE|APG8L|ATG8|ATG8B|ATG8L|GEC1 GABA type A receptor associated protein like 1 protein-coding chr12-77 chr12 6753490 6753700 + 48.3 0.000 promoter-TSS (NM_005439) promoter-TSS (NM_005439) -454 NR_026581 8079 Hs.524214 NM_005439 ENSG00000089693 MLF2 NTN4 myeloid leukemia factor 2 protein-coding chr2-101 chr2 241149508 241149718 + 48.3 0.000 promoter-TSS (NM_001282414) promoter-TSS (NM_001282414) 40 NM_001282414 5510 Hs.36587 NM_002712 ENSG00000115685 PPP1R7 SDS22 protein phosphatase 1 regulatory subunit 7 protein-coding chr1-135 chr1 53838389 53838599 + 48.3 0.000 promoter-TSS (NM_018087) promoter-TSS (NM_018087) -198 NM_018087 55706 Hs.476525 NM_018087 ENSG00000058804 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding chr14-30 chr14 23301730 23301940 + 48.3 0.000 exon (NM_001276318, exon 2 of 5) exon (NM_001276318, exon 2 of 5) 1024 NM_001276318 90673 Hs.601513 NM_001276318 ENSG00000235194 PPP1R3E - protein phosphatase 1 regulatory subunit 3E protein-coding chr7-121 chr7 138002146 138002356 + 48.3 0.000 promoter-TSS (NM_194071) promoter-TSS (NM_194071) -165 NM_001253775 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr11-152 chr11 63838863 63839073 + 48.3 0.000 promoter-TSS (NM_001163297) promoter-TSS (NM_001163297) 40 NM_001039469 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr1-223 chr1 24417076 24417286 + 48.3 0.000 intron (NM_001322855, intron 2 of 12) intron (NM_001322855, intron 2 of 12) 1156 NM_001322857 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr11-184 chr11 71299427 71299637 + 48.2 0.000 Intergenic Intergenic -74736 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr17-159 chr17 2511768 2511978 + 48.2 0.000 promoter-TSS (NM_024086) promoter-TSS (NM_024086) 15 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr10-107 chr10 84139322 84139532 + 48.2 0.000 promoter-TSS (NM_014394) promoter-TSS (NM_014394) -82 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr11-217 chr11 94876731 94876941 + 48.2 0.000 TTS (NM_001301007) TTS (NM_001301007) 96720 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr2-43 chr2 48314317 48314527 + 48.2 0.000 promoter-TSS (NM_002158) promoter-TSS (NM_002158) -260 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr20-29 chr20 32155302 32155512 + 48.2 0.000 intron (NM_001363731, intron 13 of 17) intron (NM_001363731, intron 13 of 17) 34953 NR_002781 128854 Hs.647447 NR_002781 ENSG00000235217 TSPY26P TSPYL3|bA392M18.1 testis specific protein Y-linked 26, pseudogene pseudo chr19-239 chr19 768537 768747 + 48.2 0.000 Intergenic Intergenic 17530 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr7-253 chr7 43164803 43165013 + 48.2 0.000 intron (NM_015052, intron 2 of 29) intron (NM_015052, intron 2 of 29) 14013 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr5-152 chr5 138461419 138461629 + 48.2 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -3955 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr19-196 chr19 5128499 5128709 + 48.2 0.000 intron (NM_015015, intron 11 of 22) intron (NM_015015, intron 11 of 22) 159491 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr20-15 chr20 31573060 31573270 + 48.1 0.000 promoter-TSS (NR_046853) promoter-TSS (NR_046853) 98 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr19-103 chr19 12793803 12794013 + 48.1 0.000 TTS (NM_002229) TTS (NM_002229) 2422 NM_002229 3726 Hs.25292 NM_002229 ENSG00000171223 JUNB AP-1 JunB proto-oncogene, AP-1 transcription factor subunit protein-coding chr2-131 chr2 113818566 113818776 + 48.1 0.000 Intergenic MER76|LTR|ERVL -62029 NM_001330316 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr19-208 chr19 4457790 4458000 + 48.1 0.000 promoter-TSS (NM_025241) promoter-TSS (NM_025241) -101 NM_025241 80700 Hs.435255 NM_025241 ENSG00000167671 UBXN6 UBXD1|UBXDC2 UBX domain protein 6 protein-coding chr1-103 chr1 225777633 225777843 + 48.1 0.000 promoter-TSS (NM_003133) promoter-TSS (NM_003133) -75 NM_003133 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding chr5-33 chr5 37371261 37371471 + 48.1 0.000 promoter-TSS (NM_153485) promoter-TSS (NM_153485) -260 NM_153485 9631 Hs.547696 NM_004298 ENSG00000113569 NUP155 ATFB15|N155 nucleoporin 155 protein-coding chr8-43 chr8 102412780 102412990 + 48.1 0.000 promoter-TSS (NM_015902) promoter-TSS (NM_015902) -185 NM_015902 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr7-273 chr7 28041542 28041752 + 48.1 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -138810 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr1-107 chr1 53326213 53326423 + 48.1 0.000 intron (NM_004631, intron 2 of 18) CpG 1752 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr13-26 chr13 30465865 30466075 + 48.1 0.000 promoter-TSS (NM_001363661) promoter-TSS (NM_001363661) 7 NM_001363661 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr9-37 chr9 134067976 134068186 + 48.0 0.000 promoter-TSS (NM_007371) promoter-TSS (NM_007371) -55 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr19-252 chr19 18152683 18152893 + 48.0 0.000 promoter-TSS (NM_005027) promoter-TSS (NM_005027) -375 NR_073517 5296 Hs.371344 NM_005027 ENSG00000105647 PIK3R2 MPPH|MPPH1|P85B|p85|p85-BETA phosphoinositide-3-kinase regulatory subunit 2 protein-coding chr12-206 chr12 120317453 120317663 + 48.0 0.000 Intergenic CpG 10221 NM_000928 5319 Hs.992 NM_000928 ENSG00000170890 PLA2G1B PLA2|PLA2A|PPLA2 phospholipase A2 group IB protein-coding chr19-187 chr19 45792825 45793035 + 48.0 0.000 promoter-TSS (NM_004943) promoter-TSS (NM_004943) -85 NM_004943 1762 Hs.515474 NM_004943 ENSG00000185800 DMWD D19S593E|DMR-N9|DMRN9|gene59 DM1 locus, WD repeat containing protein-coding chr2-158 chr2 86442717 86442927 + 48.0 0.000 intron (NM_018433, intron 2 of 25) intron (NM_018433, intron 2 of 25) 1361 NM_001146688 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr11-169 chr11 73779494 73779704 + 48.0 0.000 Intergenic CpG -8275 NM_001318500 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr1-158 chr1 154983112 154983322 + 48.0 0.000 promoter-TSS (NM_001184892) promoter-TSS (NM_001184892) -127 NM_201398 80308 Hs.118666 NM_025207 ENSG00000160688 FLAD1 FAD1|FADS|LSMFLAD|PP591 flavin adenine dinucleotide synthetase 1 protein-coding chr9-77 chr9 127771379 127771589 + 48.0 0.000 promoter-TSS (NM_005489) promoter-TSS (NM_005489) -115 NM_001252334 10044 Hs.306412 NM_005489 ENSG00000095370 SH2D3C CHAT|NSP3|PRO34088|SHEP1 SH2 domain containing 3C protein-coding chr19-289 chr19 41959306 41959516 + 48.0 0.000 promoter-TSS (NM_006423) promoter-TSS (NM_006423) -90 NM_006423 10567 Hs.11417 NM_006423 ENSG00000105404 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 protein-coding chr22-33 chr22 41544492 41544702 + 47.8 0.000 promoter-TSS (NM_001018052) promoter-TSS (NM_001018052) 9 NM_001282884 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding chr13-24 chr13 26221768 26221978 + 47.8 0.000 promoter-TSS (NM_183043) promoter-TSS (NM_183043) 18 NM_183043 6049 Hs.136885 NM_005977 ENSG00000127870 RNF6 - ring finger protein 6 protein-coding chr1-174 chr1 24889284 24889494 + 47.8 0.000 Intergenic ERVL-B4-int|LTR|ERVL 30027 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr19-198 chr19 49119053 49119263 + 47.8 0.000 promoter-TSS (NM_003660) promoter-TSS (NM_003660) -15 NM_018111 55150 Hs.458310 NM_018111 ENSG00000221916 C19orf73 - chromosome 19 open reading frame 73 protein-coding chr19-315 chr19 55216474 55216684 + 47.8 0.000 Intergenic Intergenic -7078 NM_002842 5794 Hs.179770 NM_002842 ENSG00000080031 PTPRH R-PTP-H|SAP1 protein tyrosine phosphatase receptor type H protein-coding chr11-133 chr11 65637884 65638094 + 47.8 0.000 promoter-TSS (NM_006747) promoter-TSS (NM_006747) -112 NM_006747 6494 Hs.530477 NM_006747 ENSG00000213445 SIPA1 SPA1 signal-induced proliferation-associated 1 protein-coding chr8-22 chr8 96493568 96493778 + 47.8 0.000 promoter-TSS (NM_002998) promoter-TSS (NM_002998) -140 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr19-247 chr19 4328308 4328518 + 47.8 0.000 intron (NM_001013841, intron 6 of 12) intron (NM_001013841, intron 6 of 12) 10414 NM_017720 55620 Hs.194385 NM_017720 ENSG00000178078 STAP2 BKS signal transducing adaptor family member 2 protein-coding chr19-131 chr19 40465799 40466009 + 47.8 0.000 promoter-TSS (NM_000713) promoter-TSS (NM_000713) -159 NM_000713 645 Hs.515785 NM_000713 ENSG00000090013 BLVRB BVRB|FLR|HEL-S-10|SDR43U1 biliverdin reductase B protein-coding chr16-92 chr16 30922602 30922812 + 47.8 0.000 promoter-TSS (NM_001282351) promoter-TSS (NM_001282351) -348 NM_001282351 54620 Hs.152149 NM_019085 ENSG00000099364 FBXL19 CXXC11|Fbl19|JHDM1C F-box and leucine rich repeat protein 19 protein-coding chr11-170 chr11 66593062 66593272 + 47.8 0.000 promoter-TSS (NM_005125) promoter-TSS (NM_005125) -18 NM_005125 9973 Hs.502917 NM_005125 ENSG00000173992 CCS - copper chaperone for superoxide dismutase protein-coding chr18-17 chr18 62715064 62715274 + 47.8 0.000 promoter-TSS (NM_194449) promoter-TSS (NM_194449) -372 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr19-191 chr19 10380552 10380762 + 47.8 0.000 promoter-TSS (NM_003331) promoter-TSS (NM_003331) -85 NM_003331 7297 Hs.75516 NM_003331 ENSG00000105397 TYK2 IMD35|JTK1 tyrosine kinase 2 protein-coding chr5-78 chr5 131797161 131797371 + 47.8 0.000 promoter-TSS (NM_001008738) promoter-TSS (NM_001008738) -249 NM_001346113 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 - folliculin interacting protein 1 protein-coding chr16-104 chr16 88784287 88784497 + 47.7 0.000 intron (NM_001142864, intron 1 of 50) CpG 828 NM_001142864 9780 Hs.377001 NM_001142864 ENSG00000103335 PIEZO1 DHS|FAM38A|LMPH3|LMPHM6|Mib piezo type mechanosensitive ion channel component 1 protein-coding chr3-113 chr3 49412148 49412358 + 47.7 0.000 promoter-TSS (NM_001313941) promoter-TSS (NM_001313941) 47 NM_022171 6988 Hs.517962 NM_022171 ENSG00000145022 TCTA - T cell leukemia translocation altered protein-coding chr2-124 chr2 135531240 135531450 + 47.7 0.000 promoter-TSS (NM_032143) promoter-TSS (NM_032143) -127 NM_032143 84083 Hs.658422 NM_032143 ENSG00000121988 ZRANB3 4933425L19Rik|AH2 zinc finger RANBP2-type containing 3 protein-coding chr2-67 chr2 113889803 113890013 + 47.7 0.000 promoter-TSS (NM_001277140) promoter-TSS (NM_001277140) -26 NR_102318 10096 Hs.433512 NM_005721 ENSG00000115091 ACTR3 ARP3 actin related protein 3 protein-coding chr11-328 chr11 82901440 82901650 + 47.7 0.000 promoter-TSS (NM_145018) promoter-TSS (NM_145018) -191 NM_001363481 220042 Hs.165607 NM_145018 ENSG00000165490 DDIAS C11orf82|noxin DNA damage induced apoptosis suppressor protein-coding chr1-147 chr1 201462011 201462221 + 47.7 0.000 Intergenic Intergenic 7055 NR_073080 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr19-193 chr19 45770525 45770735 + 47.7 0.000 exon (NM_001288764, exon 16 of 16) exon (NM_001288764, exon 16 of 16) -1378 NM_175875 147912 Hs.43314 NM_175875 ENSG00000177045 SIX5 BOR2|DMAHP SIX homeobox 5 protein-coding chr16-122 chr16 12228725 12228935 + 47.7 0.000 intron (NM_032167, intron 14 of 20) MIRc|SINE|MIR 252096 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr11-191 chr11 64996876 64997086 + 47.7 0.000 promoter-TSS (NM_138456) promoter-TSS (NM_138456) -10 NM_138456 116071 Hs.124840 NM_138456 ENSG00000168062 BATF2 SARI basic leucine zipper ATF-like transcription factor 2 protein-coding chr22-121 chr22 39014096 39014306 + 47.7 0.000 promoter-TSS (NM_014508) promoter-TSS (NM_014508) -56 NM_014508 27350 Hs.441124 NM_014508 ENSG00000244509 APOBEC3C A3C|APOBEC1L|ARDC2|ARDC4|ARP5|PBI|bK150C2.3 apolipoprotein B mRNA editing enzyme catalytic subunit 3C protein-coding chr17-164 chr17 30970983 30971193 + 47.7 0.000 promoter-TSS (NM_032322) promoter-TSS (NM_032322) 49 NM_197939 84282 Hs.29874 NM_032322 ENSG00000181481 RNF135 L13|MMFD|REUL|Riplet ring finger protein 135 protein-coding chr3-36 chr3 100709379 100709589 + 47.7 0.000 promoter-TSS (NM_006070) promoter-TSS (NM_006070) -10 NM_006070 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr16-169 chr16 69424451 69424661 + 47.7 0.000 promoter-TSS (NM_030579) promoter-TSS (NM_030579) -39 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr1-187 chr1 36149536 36149746 + 47.6 0.000 promoter-TSS (NR_073097) promoter-TSS (NR_073097) -127 NR_073098 27095 Hs.523131 NM_014408 ENSG00000054116 TRAPPC3 BET3 trafficking protein particle complex 3 protein-coding chr3-72 chr3 179562878 179563088 + 47.6 0.000 promoter-TSS (NM_004301) promoter-TSS (NM_004301) 57 NM_004301 86 Hs.435326 NM_004301 ENSG00000136518 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin like 6A protein-coding chr4-34 chr4 125314838 125315048 + 47.6 0.000 Intergenic CpG -1469 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr3-152 chr3 172153281 172153491 + 47.6 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 112855 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr7-94 chr7 27662836 27663046 + 47.6 0.000 promoter-TSS (NM_152740) promoter-TSS (NM_152740) -58 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding chr1-85 chr1 19312072 19312282 + 47.6 0.000 promoter-TSS (NR_109848) promoter-TSS (NR_109848) -31 NM_001320979 8574 Hs.571886 NM_003689 ENSG00000053371 AKR7A2 AFAR|AFAR1|AFB1-AR1|AKR7 aldo-keto reductase family 7 member A2 protein-coding chr4-238 chr4 15921202 15921412 + 47.6 0.000 Intergenic Intergenic 17433 NM_005130 9982 Hs.1690 NM_005130 ENSG00000137440 FGFBP1 FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17 fibroblast growth factor binding protein 1 protein-coding chr5-29 chr5 34007928 34008138 + 47.6 0.000 promoter-TSS (NM_014324) promoter-TSS (NM_014324) 17 NM_014324 23600 Hs.508343 NM_014324 ENSG00000242110 AMACR AMACRD|CBAS4|P504S|RACE|RM alpha-methylacyl-CoA racemase protein-coding chr10-87 chr10 547248 547458 + 47.6 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -81211 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr15-97 chr15 98067502 98067712 + 47.6 0.000 Intergenic Intergenic 21146 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chr9-51 chr9 129642217 129642427 + 47.6 0.000 promoter-TSS (NM_017873) promoter-TSS (NM_017873) -153 NM_001202403 140459 Hs.125037 NM_017873 ENSG00000148331 ASB6 - ankyrin repeat and SOCS box containing 6 protein-coding chr1-176 chr1 203278654 203278864 + 47.6 0.000 Intergenic Intergenic -8393 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr5-54 chr5 60945075 60945285 + 47.6 0.000 promoter-TSS (NM_000082) promoter-TSS (NM_000082) -25 NM_174889 91942 Hs.591757 NM_174889 ENSG00000164182 NDUFAF2 B17.2L|MC1DN10|MMTN|NDUFA12L|mimitin NADH:ubiquinone oxidoreductase complex assembly factor 2 protein-coding chr10-85 chr10 103678207 103678417 + 47.6 0.000 promoter-TSS (NM_001365079) promoter-TSS (NM_001365079) -97 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr6-79 chr6 85660340 85660550 + 47.6 0.000 Intergenic Intergenic 16923 NR_002743 26799 NR_002743 SNORD50A RNU50|U50 small nucleolar RNA, C/D box 50A snoRNA chr17-61 chr17 1516662 1516872 + 47.6 0.000 promoter-TSS (NR_028514) promoter-TSS (NR_028514) -152 NR_028514 100306951 Hs.633815 NR_028514 ENSG00000236618 PITPNA-AS1 - PITPNA antisense RNA 1 ncRNA chr6-121 chr6 35425307 35425517 + 47.5 0.000 TTS (NM_177435) TTS (NM_177435) -26949 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr11-120 chr11 65961537 65961747 + 47.5 0.000 promoter-TSS (NM_005146) promoter-TSS (NM_005146) -92 NM_005146 9092 Hs.502883 NM_005146 ENSG00000175467 SART1 Ara1|HAF|HOMS1|SART1259|SNRNP110|Snu66 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP protein-coding chr10-39 chr10 38010859 38011069 + 47.5 0.000 intron (NM_001278170, intron 1 of 3) CpG 289 NM_001278170 7581 Hs.435774 NM_006954 ENSG00000189180 ZNF33A KOX2|KOX31|KOX5|NF11A|ZNF11|ZNF11A|ZNF33|ZZAPK zinc finger protein 33A protein-coding chr3-66 chr3 160755330 160755540 + 47.5 0.000 promoter-TSS (NM_139245) promoter-TSS (NM_139245) -796 NM_139245 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr1-230 chr1 12143630 12143840 + 47.5 0.000 3' UTR (NM_001281430, exon 14 of 14) 3' UTR (NM_001281430, exon 14 of 14) -23208 NR_107000 102465836 NR_107000 ENSG00000283789 MIR7846 hsa-mir-7846 microRNA 7846 ncRNA chr11-146 chr11 62556262 62556472 + 47.5 0.000 Intergenic Intergenic 3939 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr20-79 chr20 25237954 25238164 + 47.4 0.000 Intergenic L1ME3|LINE|L1 -10026 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr14-108 chr14 53011094 53011304 + 47.4 0.000 Intergenic Intergenic -60102 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr3-125 chr3 109927314 109927524 + 47.4 0.000 Intergenic Intergenic 324591 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr3-69 chr3 48717273 48717483 + 47.4 0.000 promoter-TSS (NR_027437) promoter-TSS (NR_027437) -100 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr11-157 chr11 117327852 117328062 + 47.4 0.000 intron (NM_014956, intron 1 of 32) CpG 103 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr1-97 chr1 10210327 10210537 + 47.4 0.000 promoter-TSS (NM_015074) promoter-TSS (NM_015074) -138 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr9-66 chr9 4792708 4792918 + 47.4 0.000 promoter-TSS (NM_001286699) promoter-TSS (NM_001286699) -21 NM_001286700 10171 Hs.194121 NM_005772 ENSG00000120158 RCL1 RNAC|RPCL1 RNA terminal phosphate cyclase like 1 protein-coding chr19-270 chr19 19320541 19320751 + 47.4 0.000 promoter-TSS (NM_172231) promoter-TSS (NM_172231) -137 NM_172231 57794 Hs.515274 NM_021164 ENSG00000105705 SUGP1 F23858|RBP|SF4 SURP and G-patch domain containing 1 protein-coding chr22-171 chr22 18033677 18033887 + 47.4 0.000 intron (NR_024417, intron 1 of 1) intron (NR_024417, intron 1 of 1) 4397 NR_024417 100192420 Hs.589947 NR_024417 ENSG00000235295 LINC01634 - long intergenic non-protein coding RNA 1634 ncRNA chr8-80 chr8 97434162 97434372 + 47.4 0.000 intron (NR_125390, intron 1 of 2) intron (NR_125390, intron 1 of 2) 12230 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr5-95 chr5 142216071 142216281 + 47.4 0.000 Intergenic Intergenic 102146 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr20-82 chr20 37223194 37223404 + 47.4 0.000 intron (NM_001135771, intron 8 of 16) MIR|SINE|MIR 33609 NM_021081 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chr7-169 chr7 33062933 33063143 + 47.4 0.000 promoter-TSS (NM_001002010) promoter-TSS (NM_001002010) -241 NM_001002009 51251 Hs.487933 NM_016489 ENSG00000122643 NT5C3A NT5C3|P5'N-1|P5N-1|PN-I|POMP|PSN1|UMPH|UMPH1|cN-III|hUMP1|p36 5'-nucleotidase, cytosolic IIIA protein-coding chr9-117 chr9 91771128 91771338 + 47.4 0.000 intron (NM_001318204, intron 2 of 7) intron (NM_001318204, intron 2 of 7) -134888 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr2-49 chr2 96816197 96816407 + 47.4 0.000 promoter-TSS (NM_017623) promoter-TSS (NM_017623) 34 NM_199078 26505 Hs.711617 NM_017623 ENSG00000168763 CNNM3 ACDP3 cyclin and CBS domain divalent metal cation transport mediator 3 protein-coding chr3-44 chr3 52410206 52410416 + 47.4 0.000 promoter-TSS (NM_004656) promoter-TSS (NM_004656) -303 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr11-188 chr11 61827831 61828041 + 47.4 0.000 promoter-TSS (NM_004265) promoter-TSS (NM_004265) -364 NM_004265 9415 Hs.502745 NM_004265 ENSG00000134824 FADS2 D6D|DES6|FADSD6|LLCDL2|SLL0262|TU13 fatty acid desaturase 2 protein-coding chr16-29 chr16 88452886 88453096 + 47.3 0.000 promoter-TSS (NM_153813) promoter-TSS (NM_153813) -289 NM_153813 161882 Hs.632218 NM_153813 ENSG00000179588 ZFPM1 FOG|FOG1|ZC2HC11A|ZNF408|ZNF89A zinc finger protein, FOG family member 1 protein-coding chr12-149 chr12 45727623 45727833 + 47.3 0.000 non-coding (NR_028408, exon 1 of 1) non-coding (NR_028408, exon 1 of 1) 193 NR_028408 400027 Hs.597122 NR_028408 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA chr14-53 chr14 23321231 23321441 + 47.3 0.000 promoter-TSS (NM_001360551) promoter-TSS (NM_001360551) -121 NM_001360551 8106 Hs.707712 NM_004643 ENSG00000100836 PABPN1 OPMD|PAB2|PABII|PABP-2|PABP2 poly(A) binding protein nuclear 1 protein-coding chr19-245 chr19 55461675 55461885 + 47.3 0.000 promoter-TSS (NM_024710) promoter-TSS (NM_024710) -138 NM_001136202 79763 Hs.467306 NM_024710 ENSG00000063241 ISOC2 - isochorismatase domain containing 2 protein-coding chr3-29 chr3 125595374 125595584 + 47.3 0.000 promoter-TSS (NM_022776) promoter-TSS (NM_022776) 18 NM_022776 114885 Hs.477440 NM_022776 ENSG00000144909 OSBPL11 ORP-11|ORP11|OSBP12|TCCCIA00292 oxysterol binding protein like 11 protein-coding chr11-185 chr11 72793629 72793839 + 47.1 0.000 promoter-TSS (NM_006645) promoter-TSS (NM_006645) -29 NM_006645 10809 Hs.188606 NM_006645 ENSG00000214530 STARD10 CGI-52|NY-CO-28|PCTP2|SDCCAG28 StAR related lipid transfer domain containing 10 protein-coding chr11-151 chr11 17276460 17276670 + 47.1 0.000 promoter-TSS (NM_001352672) promoter-TSS (NM_001352672) -149 NM_001352666 4925 Hs.654599 NM_005013 ENSG00000070081 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding chr1-244 chr1 18902615 18902825 + 47.1 0.000 promoter-TSS (NM_001319218) promoter-TSS (NM_001319218) 79 NM_001319218 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chr2-56 chr2 74654169 74654379 + 47.1 0.000 promoter-TSS (NM_004263) promoter-TSS (NM_004263) 27 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr12-52 chr12 6764153 6764363 + 47.1 0.000 Intergenic Intergenic -2105 NM_001330333 5763 Hs.504613 NM_002824 ENSG00000159335 PTMS ParaT parathymosin protein-coding chr12-50 chr12 119667696 119667906 + 47.1 0.000 promoter-TSS (NM_006253) promoter-TSS (NM_006253) -332 NM_006253 5564 Hs.741184 NM_006253 ENSG00000111725 PRKAB1 AMPK|HAMPKb protein kinase AMP-activated non-catalytic subunit beta 1 protein-coding chr9-199 chr9 33151143 33151353 + 47.1 0.000 intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -15700 NR_108110 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr11-292 chr11 128582969 128583179 + 47.1 0.000 intron (NM_001143820, intron 1 of 9) MER5A1|DNA|hAT-Charlie 4484 NM_001143820 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr2-188 chr2 216792503 216792713 + 47.0 0.000 Intergenic Intergenic 67456 NM_003284 7141 Hs.3017 NM_003284 ENSG00000118245 TNP1 TP1 transition protein 1 protein-coding chr6-60 chr6 4021188 4021398 + 47.0 0.000 promoter-TSS (NM_003913) promoter-TSS (NM_003913) -7 NR_146784 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr10-191 chr10 4344597 4344807 + 47.0 0.000 Intergenic Intergenic -39544 NR_108054 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr1-146 chr1 179081937 179082147 + 47.0 0.000 promoter-TSS (NM_022371) promoter-TSS (NM_022371) -28 NM_022371 64222 Hs.584957 NM_022371 ENSG00000186283 TOR3A ADIR|ADIR2 torsin family 3 member A protein-coding chr19-199 chr19 7099010 7099220 + 47.0 0.000 Intergenic CpG 29412 NM_001044387 79230 Hs.591380 NM_024341 ENSG00000130544 ZNF557 - zinc finger protein 557 protein-coding chr3-158 chr3 183099529 183099739 + 47.0 0.000 promoter-TSS (NM_020166) promoter-TSS (NM_020166) -47 NR_120639 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding chr5-94 chr5 9716928 9717138 + 47.0 0.000 intron (NR_027112, intron 5 of 12) intron (NR_027112, intron 5 of 12) -86682 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr1-116 chr1 100249848 100250058 + 47.0 0.000 promoter-TSS (NM_001918) promoter-TSS (NM_001918) -119 NM_001918 1629 Hs.709187 NM_001918 ENSG00000137992 DBT BCATE2|BCKAD-E2|BCKADE2|BCOADC-E2|E2|E2B dihydrolipoamide branched chain transacylase E2 protein-coding chr16-46 chr16 2537758 2537968 + 47.0 0.000 promoter-TSS (NM_031268) promoter-TSS (NM_031268) -158 NM_001261816 5170 Hs.459691 NM_002613 ENSG00000140992 PDPK1 PDK1|PDPK2|PDPK2P|PRO0461 3-phosphoinositide dependent protein kinase 1 protein-coding chr17-96 chr17 63741787 63741997 + 47.0 0.000 promoter-TSS (NM_001363786) promoter-TSS (NM_001363786) -93 NR_156741 92335 Hs.514402 NM_153335 ENSG00000266173 STRADA LYK5|NY-BR-96|PMSE|STRAD|STRAD alpha|Stlk STE20 related adaptor alpha protein-coding chr3-76 chr3 42804415 42804625 + 47.0 0.000 promoter-TSS (NM_001099669) promoter-TSS (NM_001099669) 15 NM_014056 25994 Hs.593134 NM_014056 ENSG00000181061 HIGD1A HIG1|RCF1a HIG1 hypoxia inducible domain family member 1A protein-coding chr13-18 chr13 113897256 113897466 + 47.0 0.000 intron (NM_001278674, intron 1 of 7) intron (NM_001278674, intron 1 of 7) 2258 NM_001278674 643365 Hs.127655 NM_001039767 LINC00452 LINC00453 long intergenic non-protein coding RNA 452 protein-coding chr15-52 chr15 90660634 90660844 + 46.9 0.000 non-coding (NR_120371, exon 1 of 3) non-coding (NR_120371, exon 1 of 3) 505 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr10-42 chr10 73997871 73998081 + 46.9 0.000 promoter-TSS (NM_003373) promoter-TSS (NM_003373) -138 NM_014000 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr22-67 chr22 41832915 41833125 + 46.9 0.000 promoter-TSS (NM_004599) promoter-TSS (NM_004599) -85 NM_004599 6721 Hs.443258 NM_004599 ENSG00000198911 SREBF2 SREBP-2|SREBP2|bHLHd2 sterol regulatory element binding transcription factor 2 protein-coding chr10-91 chr10 68407139 68407349 + 46.8 0.000 promoter-TSS (NM_017987) promoter-TSS (NM_017987) 33 NR_103475 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr1-131 chr1 42846438 42846648 + 46.8 0.000 promoter-TSS (NM_015911) promoter-TSS (NM_015911) -30 NM_015911 51058 Hs.20879 NM_015911 ENSG00000164011 ZNF691 Zfp691 zinc finger protein 691 protein-coding chr11-277 chr11 85628379 85628589 + 46.8 0.000 promoter-TSS (NM_001193538) promoter-TSS (NM_001193538) -89 NM_001256546 55863 Hs.525063 NM_018480 ENSG00000171204 TMEM126B HT007|MC1DN29 transmembrane protein 126B protein-coding chr19-188 chr19 38388092 38388302 + 46.8 0.000 promoter-TSS (NM_152657) promoter-TSS (NM_152657) -163 NM_152657 199720 Hs.447948 NM_152657 ENSG00000179168 GGN - gametogenetin protein-coding chr2-104 chr2 46617011 46617221 + 46.8 0.000 promoter-TSS (NM_014171) promoter-TSS (NM_014171) -75 NM_002643 5281 Hs.468415 NM_002643 ENSG00000151665 PIGF - phosphatidylinositol glycan anchor biosynthesis class F protein-coding chr3-97 chr3 9749853 9750063 + 46.8 0.000 promoter-TSS (NM_016821) promoter-TSS (NM_016821) 14 NM_001354649 4968 Hs.380271 NM_002542 ENSG00000114026 OGG1 HMMH|HOGG1|MUTM|OGH1 8-oxoguanine DNA glycosylase protein-coding chr2-100 chr2 71227239 71227449 + 46.8 0.000 promoter-TSS (NM_020459) promoter-TSS (NM_020459) -241 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr12-74 chr12 49069818 49070028 + 46.8 0.000 promoter-TSS (NM_001303126) promoter-TSS (NM_001303126) 56 NM_144593 121268 Hs.159013 NM_144593 ENSG00000167550 RHEBL1 RHEBL1c RHEB like 1 protein-coding chr15-49 chr15 59105036 59105246 + 46.8 0.000 promoter-TSS (NM_004701) promoter-TSS (NM_004701) -5 NM_004701 9133 Hs.194698 NM_004701 ENSG00000157456 CCNB2 HsT17299 cyclin B2 protein-coding chr12-94 chr12 56636945 56637155 + 46.8 0.000 promoter-TSS (NM_013449) promoter-TSS (NM_013449) -691 NM_001351156 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr3-98 chr3 13895420 13895630 + 46.8 0.000 Intergenic (GAGCG)n|Simple_repeat|Simple_repeat -15454 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding chr2-130 chr2 109514252 109514462 + 46.8 0.000 Intergenic Intergenic 99310 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr9-49 chr9 36257958 36258168 + 46.7 0.000 intron (NM_001128227, intron 1 of 11) intron (NM_001128227, intron 1 of 11) 385 NM_001190384 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding chr17-191 chr17 63827429 63827639 + 46.7 0.000 promoter-TSS (NM_001199163) promoter-TSS (NM_001199163) 103 NM_002805 5705 Hs.79387 NM_002805 ENSG00000087191 PSMC5 S8|SUG-1|SUG1|TBP10|TRIP1|p45|p45/SUG proteasome 26S subunit, ATPase 5 protein-coding chr8-28 chr8 70402189 70402399 + 46.7 0.000 intron (NM_001321703, intron 1 of 22) CpG 1096 NM_001321712 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr7-151 chr7 128056979 128057189 + 46.7 0.000 intron (NM_014390, intron 16 of 23) MER44B|DNA|TcMar-Tigger -24777 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr9-106 chr9 131502894 131503104 + 46.7 0.000 promoter-TSS (NR_148392) promoter-TSS (NR_148392) 81 NR_148400 10585 Hs.522449 NM_007171 ENSG00000130714 POMT1 LGMD2K|LGMDR11|MDDGA1|MDDGB1|MDDGC1|RT protein O-mannosyltransferase 1 protein-coding chr21-15 chr21 46228795 46229005 + 46.7 0.000 promoter-TSS (NR_002776) promoter-TSS (NR_002776) -76 NM_001001438 4047 Hs.596543 NM_002340 ENSG00000160285 LSS CTRCT44|HYPT14|OSC lanosterol synthase protein-coding chr14-69 chr14 64338827 64339037 + 46.7 0.000 promoter-TSS (NM_001291712) promoter-TSS (NM_001291712) -319 NM_001291712 2100 Hs.660607 NM_001437 ENSG00000140009 ESR2 ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8 estrogen receptor 2 protein-coding chr17-165 chr17 75393919 75394129 + 46.7 0.000 intron (NM_002086, intron 1 of 5) intron (NM_002086, intron 1 of 5) 11654 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr17-177 chr17 81566743 81566953 + 46.7 0.000 promoter-TSS (NR_130140) promoter-TSS (NR_130140) -246 NR_130140 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr16-147 chr16 53703847 53704057 + 46.7 0.000 promoter-TSS (NM_001363898) promoter-TSS (NM_001363898) -11 NM_001363905 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr12-150 chr12 49983968 49984178 + 46.7 0.000 Intergenic Intergenic 11126 NM_001652 363 Hs.54505 NM_001652 ENSG00000086159 AQP6 AQP2L|KID aquaporin 6 protein-coding chr14-56 chr14 68979294 68979504 + 46.7 0.000 promoter-TSS (NR_073422) promoter-TSS (NR_073422) -33 NM_001130004 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr1-179 chr1 3624745 3624955 + 46.5 0.000 promoter-TSS (NM_182752) promoter-TSS (NM_182752) -165 NM_182752 127262 Hs.20529 NM_182752 ENSG00000158109 TPRG1L FAM79A|h-mover|mover tumor protein p63 regulated 1 like protein-coding chr16-146 chr16 3690413 3690623 + 46.5 0.000 intron (NM_001272049, intron 1 of 16) intron (NM_001272049, intron 1 of 16) 27006 NM_016292 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr7-118 chr7 101244780 101244990 + 46.5 0.000 intron (NM_016068, intron 1 of 4) CpG 196 NM_016068 51024 Hs.423968 NM_016068 ENSG00000214253 FIS1 CGI-135|TTC11 fission, mitochondrial 1 protein-coding chr17-205 chr17 17921272 17921482 + 46.5 0.000 intron (NM_001288787, intron 1 of 13) intron (NM_001288787, intron 1 of 13) 51023 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr2-114 chr2 200525933 200526143 + 46.5 0.000 promoter-TSS (NM_001160033) promoter-TSS (NM_001160033) -104 NM_001160033 151246 Hs.655182 NM_152524 ENSG00000163535 SGO2 SGOL2|TRIPIN shugoshin 2 protein-coding chr8-55 chr8 86508683 86508893 + 46.5 0.000 promoter-TSS (NM_016033) promoter-TSS (NM_016033) -8 NM_001286707 51115 Hs.145386 NM_016033 ENSG00000176623 RMDN1 CGI-90|FAM82B|RMD-1|RMD1 regulator of microtubule dynamics 1 protein-coding chr19-314 chr19 46115478 46115688 + 46.5 0.000 Intergenic Intergenic 9105 NM_207393 388555 Hs.365496 NM_207393 ENSG00000188624 IGFL3 UNQ483 IGF like family member 3 protein-coding chr1-209 chr1 244970769 244970979 + 46.5 0.000 promoter-TSS (NR_111907) promoter-TSS (NR_111907) -5 NR_111907 101928068 Hs.134857 NR_111907 LOC101928068 - uncharacterized LOC101928068 ncRNA chr4-40 chr4 183504499 183504709 + 46.5 0.000 promoter-TSS (NM_001564) promoter-TSS (NM_001564) -89 NR_033995 389247 Hs.385787 NR_033995 LOC389247 - uncharacterized LOC389247 ncRNA chr17-214 chr17 48892437 48892647 + 46.5 0.000 promoter-TSS (NM_005175) promoter-TSS (NM_005175) -245 NM_005175 516 Hs.80986 NM_005175 ENSG00000159199 ATP5MC1 ATP5A|ATP5G|ATP5G1 ATP synthase membrane subunit c locus 1 protein-coding chr8-36 chr8 61714659 61714869 + 46.5 0.000 promoter-TSS (NM_032466) promoter-TSS (NM_032466) -24 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr6-153 chr6 73704355 73704565 + 46.5 0.000 intron (NM_001159588, intron 2 of 31) intron (NM_001159588, intron 2 of 31) 8257 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr6-66 chr6 52512405 52512615 + 46.5 0.000 intron (NM_012288, intron 4 of 10) intron (NM_012288, intron 4 of 10) 64550 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr19-79 chr19 1566526 1566736 + 46.5 0.000 intron (NM_203304, intron 1 of 1) intron (NM_203304, intron 1 of 1) 1427 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chrX-11 chrX 52995678 52995888 + 46.4 0.000 promoter-TSS (NM_001242489) promoter-TSS (NM_001242489) -311 NM_001242494 29057 Hs.6451 NM_014138 ENSG00000268350 FAM156A PRO0659|TMEM29 family with sequence similarity 156 member A protein-coding chr1-198 chr1 117121694 117121904 + 46.4 0.000 promoter-TSS (NM_025188) promoter-TSS (NM_025188) -50 NM_001145635 80263 Hs.301526 NM_025188 ENSG00000134253 TRIM45 RNF99 tripartite motif containing 45 protein-coding chr4-171 chr4 98341344 98341554 + 46.4 0.000 intron (NM_021159, intron 2 of 14) intron (NM_021159, intron 2 of 14) 80065 NM_001100426 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding chr9-125 chr9 89310873 89311083 + 46.4 0.000 promoter-TSS (NM_001827) promoter-TSS (NM_001827) -217 NM_001827 1164 Hs.83758 NM_001827 ENSG00000123975 CKS2 CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding chr3-59 chr3 128487901 128488111 + 46.4 0.000 promoter-TSS (NM_001145662) promoter-TSS (NM_001145662) -85 NM_001145662 2624 Hs.367725 NM_032638 ENSG00000179348 GATA2 DCML|IMD21|MONOMAC|NFE1B GATA binding protein 2 protein-coding chr19-258 chr19 40425936 40426146 + 46.4 0.000 promoter-TSS (NM_013376) promoter-TSS (NM_013376) -49 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1|TRIPBR1 SERTA domain containing 1 protein-coding chr2-120 chr2 234996447 234996657 + 46.4 0.000 intron (NM_001371304, intron 2 of 5) intron (NM_001371304, intron 2 of 5) 15178 NM_001371305 chr3-140 chr3 134795092 134795302 + 46.4 0.000 promoter-TSS (NM_004441) promoter-TSS (NM_004441) -63 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr22-29 chr22 19122385 19122595 + 46.4 0.000 promoter-TSS (NM_001173534) promoter-TSS (NM_001173534) -36 NM_001173533 9993 Hs.517357 NM_005137 ENSG00000070413 DGCR2 DGS-C|IDD|LAN|SEZ-12 DiGeorge syndrome critical region gene 2 protein-coding chr5-176 chr5 167294948 167295158 + 46.4 0.000 intron (NM_001122679, intron 2 of 29) intron (NM_001122679, intron 2 of 29) -126652 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr7-147 chr7 66115308 66115518 + 46.4 0.000 intron (NM_001040648, intron 1 of 2) intron (NM_001040648, intron 1 of 2) 566 NM_014478 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr4-61 chr4 75673431 75673641 + 46.4 0.000 promoter-TSS (NM_203505) promoter-TSS (NM_203505) -53 NM_203505 9908 Hs.303676 NM_012297 ENSG00000138757 G3BP2 - G3BP stress granule assembly factor 2 protein-coding chr5-85 chr5 72308374 72308584 + 46.3 0.000 intron (NM_015084, intron 2 of 10) CpG 11761 NM_001286748 23107 Hs.482491 NM_015084 ENSG00000113048 MRPS27 MRP-S27|S27mt mitochondrial ribosomal protein S27 protein-coding chr6-72 chr6 158042308 158042518 + 46.3 0.000 intron (NM_003898, intron 4 of 26) intron (NM_003898, intron 4 of 26) 25320 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr19-238 chr19 50384060 50384270 + 46.3 0.000 promoter-TSS (NM_002691) promoter-TSS (NM_002691) -158 NM_001256849 5424 Hs.279413 NM_002691 ENSG00000062822 POLD1 CDC2|CRCS10|MDPL|POLD DNA polymerase delta 1, catalytic subunit protein-coding chr17-346 chr17 40471162 40471372 + 46.3 0.000 Intergenic Intergenic 27817 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr14-95 chr14 68941973 68942183 + 46.3 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 37224 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr5-240 chr5 176501441 176501651 + 46.3 0.000 intron (NM_014613, intron 10 of 10) intron (NM_014613, intron 10 of 10) 35856 NM_014901 22838 Hs.434888 NM_014901 ENSG00000146083 RNF44 - ring finger protein 44 protein-coding chr10-90 chr10 100373348 100373558 + 46.3 0.000 promoter-TSS (NR_026762) promoter-TSS (NR_026762) -123 NR_026762 90271 Hs.628088 NR_026762 ENSG00000235823 OLMALINC C10orf75|HI-LNC80|LINC00263|NCRNA00263|OLMALINCAS oligodendrocyte maturation-associated long intergenic non-coding RNA ncRNA chr6-108 chr6 4018536 4018746 + 46.3 0.000 Intergenic CpG -2659 NR_146784 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr19-291 chr19 5139247 5139457 + 46.3 0.000 intron (NM_015015, intron 18 of 22) L1MB1|LINE|L1 170239 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr16-157 chr16 50024989 50025199 + 46.3 0.000 promoter-TSS (NM_001281789) promoter-TSS (NM_001281789) -112 NR_104042 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding chr3-109 chr3 142578630 142578840 + 46.3 0.000 promoter-TSS (NM_001184) promoter-TSS (NM_001184) -2 NM_001184 545 Hs.271791 NM_001184 ENSG00000175054 ATR FCTCS|FRP1|MEC1|SCKL|SCKL1 ATR serine/threonine kinase protein-coding chr2-61 chr2 197499932 197500142 + 46.3 0.000 promoter-TSS (NM_001202485) promoter-TSS (NM_001202485) -197 NM_002156 3329 Hs.595053 NM_002156 ENSG00000144381 HSPD1 CPN60|GROEL|HLD4|HSP-60|HSP60|HSP65|HuCHA60|SPG13 heat shock protein family D (Hsp60) member 1 protein-coding chr3-119 chr3 52897393 52897603 + 46.3 0.000 promoter-TSS (NM_198563) promoter-TSS (NM_198563) 50 NM_001198974 100526772 NM_001198974 ENSG00000248592 STIMATE-MUSTN1 TMEM110-MUSTN1 STIMATE-MUSTN1 readthrough protein-coding chr12-85 chr12 6555926 6556136 + 46.2 0.000 promoter-TSS (NR_036467) promoter-TSS (NR_036467) 11 NM_001039670 25900 Hs.15243 NM_015438 ENSG00000010295 IFFO1 HOM-TES-103|IFFO intermediate filament family orphan 1 protein-coding chr2-293 chr2 117856601 117856811 + 46.2 0.000 Intergenic LTR40c|LTR|ERVL 22975 NR_158150 107985939 NR_158150 LOC107985939 - uncharacterized LOC107985939 ncRNA chr5-93 chr5 177300305 177300515 + 46.2 0.000 TTS (NM_130781) TTS (NM_130781) 3309 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr19-173 chr19 15379801 15380011 + 46.2 0.000 promoter-TSS (NM_005858) promoter-TSS (NM_005858) -119 NM_005858 10270 Hs.594496 NM_005858 ENSG00000105127 AKAP8 AKAP 95|AKAP-8|AKAP-95|AKAP95 A-kinase anchoring protein 8 protein-coding chr1-151 chr1 155193539 155193749 + 46.2 0.000 promoter-TSS (NM_001044392) promoter-TSS (NM_001044392) -729 NM_001204286 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr17-114 chr17 71976110 71976320 + 46.2 0.000 Intergenic Intergenic 49764 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA chr16-123 chr16 67892993 67893203 + 46.2 0.000 promoter-TSS (NM_006742) promoter-TSS (NM_006742) -156 NM_006742 5681 Hs.513683 NM_006742 ENSG00000159792 PSKH1 - protein serine kinase H1 protein-coding chr16-108 chr16 68237522 68237732 + 46.2 0.000 Intergenic CpG-9862 -1500 NM_001365264 80004 Hs.436585 NM_024939 ENSG00000103067 ESRP2 RBM35B epithelial splicing regulatory protein 2 protein-coding chr12-146 chr12 8949769 8949979 + 46.2 0.000 promoter-TSS (NM_001207024) promoter-TSS (NM_001207024) -113 NM_001207024 4074 Hs.134084 NM_002355 ENSG00000003056 M6PR CD-M6PR|CD-MPR|MPR 46|MPR-46|MPR46|SMPR mannose-6-phosphate receptor, cation dependent protein-coding chr1-234 chr1 70410959 70411169 + 46.2 0.000 promoter-TSS (NM_153742) promoter-TSS (NM_153742) -154 NM_153742 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr6-31 chr6 37257728 37257938 + 46.2 0.000 promoter-TSS (NM_017772) promoter-TSS (NM_017772) 61 NR_130108 55633 Hs.731702 NM_017772 ENSG00000065491 TBC1D22B C6orf197 TBC1 domain family member 22B protein-coding chr1-349 chr1 245085561 245085771 + 46.2 0.000 intron (NM_001143943, intron 6 of 6) L2|LINE|L2 -69319 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr3-169 chr3 169228052 169228262 + 46.2 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -80686 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr5-177 chr5 167699586 167699796 + 46.2 0.000 intron (NM_001368145, intron 1 of 26) intron (NM_001368145, intron 1 of 26) -55238 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr16-111 chr16 88856899 88857109 + 46.2 0.000 promoter-TSS (NR_134670) promoter-TSS (NR_134670) -57 NM_001323543 2588 Hs.271383 NM_000512 ENSG00000141012 GALNS GALNAC6S|GAS|GalN6S|MPS4A galactosamine (N-acetyl)-6-sulfatase protein-coding chr17-153 chr17 48972408 48972618 + 46.2 0.000 Intergenic (CACCCC)n|Simple_repeat|Simple_repeat -3917 NM_004123 2695 Hs.1454 NM_004123 ENSG00000159224 GIP - gastric inhibitory polypeptide protein-coding chr4-65 chr4 2963466 2963676 + 46.1 0.000 promoter-TSS (NM_001291978) promoter-TSS (NM_001291978) 0 NM_182982 2868 Hs.32959 NM_005307 ENSG00000125388 GRK4 GPRK2L|GPRK4|GRK4a|IT11 G protein-coupled receptor kinase 4 protein-coding chr20-23 chr20 49278235 49278445 + 46.1 0.000 promoter-TSS (NR_036659) promoter-TSS (NR_036659) 162 NR_003605 441951 Hs.356766 NR_003604 ENSG00000177410 ZFAS1 C20orf199|HSUP1|HSUP2|NCRNA00275|ZNFX1-AS1 ZNFX1 antisense RNA 1 ncRNA chr17-86 chr17 67529057 67529267 + 46.1 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -57577 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr19-231 chr19 40443121 40443331 + 46.1 0.000 promoter-TSS (NM_013368) promoter-TSS (NM_013368) -628 NM_013368 29946 Hs.515412 NM_013368 ENSG00000167565 SERTAD3 RBT1 SERTA domain containing 3 protein-coding chr1-192 chr1 155610026 155610236 + 46.1 0.000 promoter-TSS (NM_001350786) promoter-TSS (NM_001350786) -39 NM_018116 55154 Hs.656547 NM_018116 ENSG00000125459 MSTO1 LST005|MMYAT|MST misato mitochondrial distribution and morphology regulator 1 protein-coding chr22-110 chr22 38681911 38682121 + 46.1 0.000 promoter-TSS (NM_020243) promoter-TSS (NM_020243) 59 NM_020243 56993 Hs.595072 NM_020243 ENSG00000100216 TOMM22 1C9-2|MST065|MSTP065|TOM22 translocase of outer mitochondrial membrane 22 protein-coding chr1-108 chr1 68497124 68497334 + 46.1 0.000 promoter-TSS (NM_017779) promoter-TSS (NM_017779) -147 NM_017779 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding chr9-101 chr9 35072705 35072915 + 46.1 0.000 promoter-TSS (NM_007126) promoter-TSS (NM_007126) -142 NM_001354927 7415 Hs.529782 NM_007126 ENSG00000165280 VCP CDC48|TERA|p97 valosin containing protein protein-coding chr2-151 chr2 232260103 232260313 + 46.0 0.000 intron (NR_046477, intron 11 of 18) intron (NR_046477, intron 11 of 18) 87555 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr17-284 chr17 48107293 48107503 + 46.0 0.000 promoter-TSS (NM_001330320) promoter-TSS (NM_001330320) -135 NM_001330320 29916 Hs.15827 NM_013323 ENSG00000002919 SNX11 - sorting nexin 11 protein-coding chr10-102 chr10 99620540 99620750 + 46.0 0.000 promoter-TSS (NM_031212) promoter-TSS (NM_031212) -206 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding chr19-306 chr19 44094129 44094339 + 46.0 0.000 promoter-TSS (NM_001321645) promoter-TSS (NM_001321645) -127 NM_013398 7767 Hs.585869 NM_013398 ENSG00000267680 ZNF224 BMZF-2|BMZF2|KOX22|ZNF233|ZNF255|ZNF27 zinc finger protein 224 protein-coding chr19-179 chr19 50511214 50511424 + 46.0 0.000 promoter-TSS (NM_001270686) promoter-TSS (NM_001270686) 36 NM_001270641 126119 Hs.467151 NM_138334 ENSG00000161677 JOSD2 SBBI54 Josephin domain containing 2 protein-coding chr6-42 chr6 41941948 41942158 + 46.0 0.000 promoter-TSS (NM_001287427) promoter-TSS (NM_001287427) -205 NM_001136125 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr19-141 chr19 2269322 2269532 + 45.8 0.000 promoter-TSS (NM_001301020) promoter-TSS (NM_001301020) -59 NM_004152 4946 Hs.446427 NM_004152 ENSG00000104904 OAZ1 AZ1|AZI|OAZ ornithine decarboxylase antizyme 1 protein-coding chr1-196 chr1 246931998 246932208 + 45.8 0.000 promoter-TSS (NM_001323342) promoter-TSS (NM_001323342) -155 NM_001323343 25909 Hs.300887 NM_015446 ENSG00000153207 AHCTF1 ELYS|MST108|MSTP108|TMBS62 AT-hook containing transcription factor 1 protein-coding chr4-41 chr4 7207250 7207460 + 45.8 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 14817 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr2-207 chr2 61853832 61854042 + 45.8 0.000 exon (NM_001201543, exon 1 of 7) exon (NM_001201543, exon 1 of 7) 123 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr18-15 chr18 36129235 36129445 + 45.8 0.000 promoter-TSS (NM_001324468) promoter-TSS (NM_001324468) 0 NM_012319 25800 Hs.79136 NM_012319 ENSG00000141424 SLC39A6 LIV-1|ZIP6 solute carrier family 39 member 6 protein-coding chr22-63 chr22 31248316 31248526 + 45.8 0.000 promoter-TSS (NM_016733) promoter-TSS (NM_016733) 37 NM_001031801 3985 Hs.474596 NM_005569 ENSG00000182541 LIMK2 - LIM domain kinase 2 protein-coding chr9-99 chr9 131373402 131373612 + 45.8 0.000 Intergenic CpG -56583 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr17-116 chr17 82292732 82292942 + 45.8 0.000 promoter-TSS (NR_135639) promoter-TSS (NR_135639) -23 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr5-51 chr5 96702583 96702793 + 45.8 0.000 promoter-TSS (NM_001284212) promoter-TSS (NM_001284212) 28 NM_001330633 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr3-54 chr3 45689269 45689479 + 45.8 0.000 promoter-TSS (NM_014016) promoter-TSS (NM_014016) -22 NM_001319072 22908 Hs.156509 NM_014016 ENSG00000211456 SACM1L SAC1 SAC1 like phosphatidylinositide phosphatase protein-coding chr19-307 chr19 44212342 44212552 + 45.8 0.000 promoter-TSS (NM_001289166) promoter-TSS (NM_001289166) -81 NM_001289166 7770 Hs.298089 NM_182490 ENSG00000131115 ZNF227 - zinc finger protein 227 protein-coding chr5-67 chr5 271407 271617 + 45.8 0.000 promoter-TSS (NR_073609) promoter-TSS (NR_073609) 12 NR_104613 102467073 Hs.368328 NR_104613 HRAT5 - heart tissue-associated transcript 5 ncRNA chr22-43 chr22 41589928 41590138 + 45.8 0.000 promoter-TSS (NM_002676) promoter-TSS (NM_002676) -193 NM_002676 5372 Hs.75835 NM_002676 ENSG00000100417 PMM1 PMM 1|PMMH-22|Sec53 phosphomannomutase 1 protein-coding chr2-152 chr2 33529946 33530156 + 45.8 0.000 intron (NM_015376, intron 9 of 16) intron (NM_015376, intron 9 of 16) 16176 NM_015376 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding chr12-43 chr12 4320966 4321176 + 45.7 0.000 promoter-TSS (NM_020375) promoter-TSS (NM_020375) -142 NM_020375 57103 Hs.504545 NM_020375 ENSG00000078237 TIGAR C12orf5|FR2BP TP53 induced glycolysis regulatory phosphatase protein-coding chr10-106 chr10 51244851 51245061 + 45.7 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) -54617 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr1-320 chr1 239914791 239915001 + 45.7 0.000 3' UTR (NM_000740, exon 5 of 5) 3' UTR (NM_000740, exon 5 of 5) -15024 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr3-95 chr3 32106402 32106612 + 45.7 0.000 promoter-TSS (NM_015141) promoter-TSS (NM_015141) -4 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chr1-182 chr1 2290655 2290865 + 45.7 0.000 intron (NM_003036, intron 1 of 6) CpG 61901 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr9-189 chr9 134403927 134404137 + 45.7 0.000 intron (NM_002957, intron 2 of 9) intron (NM_002957, intron 2 of 9) -2528 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding KI270879.1-2 KI270879.1 267011 267221 + 45.7 0.000 NA NA NA NA chr5-68 chr5 65624386 65624596 + 45.7 0.000 promoter-TSS (NM_001365341) promoter-TSS (NM_001365341) -158 NM_001656 373 Hs.792 NM_001656 ENSG00000113595 TRIM23 ARD1|ARFD1|RNF46 tripartite motif containing 23 protein-coding chr9-167 chr9 131180597 131180807 + 45.7 0.000 intron (NM_001318324, intron 24 of 35) L2b|LINE|L2 -9437 NM_001318325 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr9-78 chr9 137578747 137578957 + 45.6 0.000 promoter-TSS (NM_001346376) promoter-TSS (NM_001346376) 73 NM_001346370 92715 Hs.292570 NM_138778 ENSG00000148399 DPH7 C9orf112|RRT2|WDR85 diphthamide biosynthesis 7 protein-coding chr6-23 chr6 42890804 42891014 + 45.6 0.000 promoter-TSS (NM_001008739) promoter-TSS (NM_001008739) -88 NM_001008739 441150 Hs.571098 NM_001008739 ENSG00000221821 C6orf226 - chromosome 6 open reading frame 226 protein-coding chr4-84 chr4 73222968 73223178 + 45.6 0.000 promoter-TSS (NM_001286771) promoter-TSS (NM_001286771) -16 NM_001286771 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chr19-229 chr19 1269137 1269347 + 45.6 0.000 promoter-TSS (NR_023313) promoter-TSS (NR_023313) -26 NM_001280 1153 Hs.618145 NM_001280 ENSG00000099622 CIRBP CIRP cold inducible RNA binding protein protein-coding chr11-215 chr11 72112257 72112467 + 45.6 0.000 promoter-TSS (NM_001278494) promoter-TSS (NM_001278494) -64 NM_001278491 25906 Hs.38044 NM_014042 ENSG00000110200 ANAPC15 APC15|C11orf51|HSPC020 anaphase promoting complex subunit 15 protein-coding chr3-55 chr3 123585035 123585245 + 45.6 0.000 promoter-TSS (NM_198402) promoter-TSS (NM_198402) -87 NM_198402 201562 Hs.705480 NM_198402 ENSG00000206527 HACD2 PTPLB 3-hydroxyacyl-CoA dehydratase 2 protein-coding chr11-193 chr11 65481649 65481859 + 45.6 0.000 Intergenic Intergenic -15984 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 ncRNA chr1-120 chr1 43969830 43970040 + 45.5 0.000 promoter-TSS (NM_001319168) promoter-TSS (NM_001319168) -75 NM_001319169 1802 Hs.632398 NM_001384 ENSG00000132768 DPH2 DPH2L2 diphthamide biosynthesis 2 protein-coding chr14-51 chr14 35292183 35292393 + 45.5 0.000 promoter-TSS (NM_002791) promoter-TSS (NM_002791) -29 NR_104110 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr12-113 chr12 121190593 121190803 + 45.5 0.000 Intergenic Intergenic -19431 NM_001261397 5025 Hs.321709 NM_002560 ENSG00000135124 P2RX4 P2X4|P2X4R purinergic receptor P2X 4 protein-coding chr1-100 chr1 2194906 2195116 + 45.5 0.000 promoter-TSS (NM_001256945) promoter-TSS (NM_001256945) -236 NR_046427 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr22-242 chr22 21816707 21816917 + 45.5 0.000 intron (NM_002745, intron 1 of 8) CR1-3_Croc|LINE|CR1 50868 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr3-129 chr3 9249591 9249801 + 45.5 0.000 promoter-TSS (NM_001033117) promoter-TSS (NM_001033117) -50 NM_001033117 9901 Hs.654743 NM_014850 ENSG00000196220 SRGAP3 ARHGAP14|MEGAP|SRGAP2|WRP SLIT-ROBO Rho GTPase activating protein 3 protein-coding chr13-47 chr13 33285747 33285957 + 45.5 0.000 promoter-TSS (NM_178006) promoter-TSS (NM_178006) -97 NM_178006 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr17-142 chr17 42155010 42155220 + 45.5 0.000 promoter-TSS (NM_001252039) promoter-TSS (NM_001252039) -126 NM_004583 5878 Hs.650382 NM_004583 ENSG00000108774 RAB5C L1880|RAB5CL|RAB5L|RABL RAB5C, member RAS oncogene family protein-coding chr22-65 chr22 20117119 20117329 + 45.5 0.000 promoter-TSS (NM_182984) promoter-TSS (NM_182984) 2 NM_001331039 27037 Hs.713579 NM_022727 ENSG00000099899 TRMT2A HTF9C tRNA methyltransferase 2 homolog A protein-coding chr3-215 chr3 119831930 119832140 + 45.5 0.000 intron (NM_001354596, intron 9 of 9) MLT1F|LTR|ERVL-MaLR 49325 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding chr7-148 chr7 75056567 75056777 + 45.5 0.000 3' UTR (NM_001281441, exon 9 of 9) 3' UTR (NM_001281441, exon 9 of 9) 17130 NM_001363447 81554 Hs.529623 NM_030798 ENSG00000274523 RCC1L WBSCR16 RCC1 like protein-coding chr10-175 chr10 43436815 43437025 + 45.5 0.000 promoter-TSS (NM_001355445) promoter-TSS (NM_001355445) 72 NM_001355446 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding chr16-214 chr16 57300527 57300737 + 45.5 0.000 Intergenic Intergenic -15960 NM_015993 51090 Hs.632215 NM_015993 ENSG00000102934 PLLP PMLP|TM4SF11 plasmolipin protein-coding chr2-169 chr2 46812454 46812664 + 45.5 0.000 Intergenic Intergenic -4109 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr1-342 chr1 244164071 244164281 + 45.5 0.000 Intergenic Intergenic 110971 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr7-63 chr7 151520035 151520245 + 45.4 0.000 promoter-TSS (NM_005614) promoter-TSS (NM_005614) -245 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr11-190 chr11 60906526 60906736 + 45.4 0.000 promoter-TSS (NM_014502) promoter-TSS (NM_014502) -46 NM_014502 27339 Hs.502705 NM_014502 ENSG00000110107 PRPF19 NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4 pre-mRNA processing factor 19 protein-coding chr8-65 chr8 141147809 141148019 + 45.4 0.000 intron (NM_001362798, intron 5 of 21) intron (NM_001362798, intron 5 of 21) 19325 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr6-20 chr6 43427546 43427756 + 45.4 0.000 promoter-TSS (NR_146762) promoter-TSS (NR_146762) 110 NM_001350518 89845 Hs.55879 NM_033450 ENSG00000124574 ABCC10 EST182763|MRP7|SIMRP7 ATP binding cassette subfamily C member 10 protein-coding chr19-108 chr19 1253090 1253300 + 45.4 0.000 intron (NM_177401, intron 4 of 7) intron (NM_177401, intron 4 of 7) 4642 NM_177401 90007 Hs.465529 NM_177401 ENSG00000167470 MIDN - midnolin protein-coding chr12-40 chr12 112125430 112125640 + 45.4 0.000 promoter-TSS (NM_001143906) promoter-TSS (NM_001143906) -10 NM_001143906 10906 Hs.5148 NM_006700 ENSG00000135148 TRAFD1 FLN29 TRAF-type zinc finger domain containing 1 protein-coding chr19-274 chr19 49142984 49143194 + 45.4 0.000 intron (NR_103842, intron 20 of 28) intron (NR_103842, intron 20 of 28) 12307 NM_002152 3270 Hs.436885 NM_002152 ENSG00000130528 HRC - histidine rich calcium binding protein protein-coding chr17-139 chr17 59106824 59107034 + 45.4 0.000 promoter-TSS (NM_015294) promoter-TSS (NM_015294) -49 NM_015294 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding chr7-88 chr7 2555580 2555790 + 45.2 0.000 promoter-TSS (NM_001350627) promoter-TSS (NM_001350627) -161 NR_146879 221927 Hs.520623 NM_152743 ENSG00000106009 BRAT1 BAAT1|C7orf27|NEDCAS|RMFSL BRCA1 associated ATM activator 1 protein-coding chr12-140 chr12 48995465 48995675 + 45.2 0.000 3' UTR (NM_015086, exon 2 of 2) 3' UTR (NM_015086, exon 2 of 2) -2777 NR_147178 105369758 Hs.120228 NR_147178 ENSG00000257913 DDN-AS1 CAT1507 DDN and PRKAG1 antisense RNA 1 ncRNA chr3-114 chr3 115147719 115147929 + 45.2 0.000 promoter-TSS (NM_001348803) promoter-TSS (NM_001348803) -536 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr9-146 chr9 128371284 128371494 + 45.2 0.000 promoter-TSS (NM_001135947) promoter-TSS (NM_001135947) 15 NR_049743 81605 Hs.495229 NM_030914 ENSG00000167118 URM1 C9orf74 ubiquitin related modifier 1 protein-coding chr9-56 chr9 137129745 137129955 + 45.2 0.000 Intergenic CpG -9304 NM_007327 2902 Hs.558334 NM_000832 ENSG00000176884 GRIN1 GluN1|MRD8|NDHMSD|NDHMSR|NMD-R1|NMDA1|NMDAR1|NR1 glutamate ionotropic receptor NMDA type subunit 1 protein-coding chr1-205 chr1 9371660 9371870 + 45.2 0.000 Intergenic Intergenic 57151 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chrX-12 chrX 13653009 13653219 + 45.2 0.000 promoter-TSS (NM_001297563) promoter-TSS (NM_001297563) -27 NM_152634 170082 Hs.222855 NM_152634 ENSG00000176896 TCEANC - transcription elongation factor A N-terminal and central domain containing protein-coding chr2-176 chr2 231961476 231961686 + 45.2 0.000 promoter-TSS (NM_001257282) promoter-TSS (NM_001257282) -2 NM_001257282 129563 Hs.732236 NM_152383 ENSG00000144535 DIS3L2 FAM6A|PRLMNS|hDIS3L2 DIS3 like 3'-5' exoribonuclease 2 protein-coding chr1-134 chr1 45687029 45687239 + 45.2 0.000 promoter-TSS (NM_021639) promoter-TSS (NM_021639) -601 NM_021639 60313 Hs.238432 NM_021639 ENSG00000159592 GPBP1L1 SP192 GC-rich promoter binding protein 1 like 1 protein-coding chr22-128 chr22 42635589 42635799 + 45.2 0.000 intron (NM_007326, intron 2 of 8) intron (NM_007326, intron 2 of 8) 4907 NM_001165877 267020 Hs.664737 NM_001165877 ENSG00000249222 ATP5MGL ATP5K2|ATP5L2 ATP synthase membrane subunit g like protein-coding chr20-61 chr20 35541882 35542092 + 45.2 0.000 promoter-TSS (NM_015966) promoter-TSS (NM_015966) -91 NM_198398 51614 Hs.472558 NM_015966 ENSG00000125991 ERGIC3 C20orf47|C2orf47|CGI-54|Erv46|NY-BR-84|PRO0989|SDBCAG84|dJ477O4.2 ERGIC and golgi 3 protein-coding chr1-236 chr1 16978758 16978968 + 45.2 0.000 intron (NM_001135247, intron 1 of 8) intron (NM_001135247, intron 1 of 8) 1757 NM_002403 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr19-94 chr19 6373377 6373587 + 45.2 0.000 intron (NM_032306, intron 1 of 3) CpG 688 NM_032306 84266 Hs.111099 NM_032306 ENSG00000125652 ALKBH7 ABH7|SPATA11|UNQ6002 alkB homolog 7 protein-coding chr2-220 chr2 207239371 207239581 + 45.2 0.000 promoter-TSS (NR_146555) promoter-TSS (NR_146555) -335 NR_146555 105373853 Hs.678559 NR_146555 ENSG00000229647 MYOSLID - myocardin-induced smooth muscle lncRNA, inducer of differentiation ncRNA chrX-20 chrX 48737185 48737395 + 45.2 0.000 Intergenic CpG -24457 NM_001080489 392465 Hs.437539 NM_001080489 ENSG00000171433 GLOD5 - glyoxalase domain containing 5 protein-coding chr9-136 chr9 128067402 128067612 + 45.1 0.000 promoter-TSS (NM_197956) promoter-TSS (NM_197956) -187 NM_197956 203245 Hs.373606 NM_197956 ENSG00000171169 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding chr2-85 chr2 231710204 231710414 + 45.1 0.000 intron (NM_001099285, intron 1 of 4) CpG-17106 1784 NM_002823 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr12-61 chr12 54359131 54359341 + 45.1 0.000 intron (NR_120487, intron 1 of 3) intron (NR_120487, intron 1 of 3) 5250 NM_020370 53831 Hs.306199 NM_020370 ENSG00000139572 GPR84 EX33|GPCR4 G protein-coupled receptor 84 protein-coding chr15-55 chr15 92803904 92804114 + 45.1 0.000 Intergenic Intergenic 8525 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr12-76 chr12 122946961 122947171 + 45.1 0.000 intron (NM_001243014, intron 5 of 11) intron (NM_001243014, intron 5 of 11) 19397 NM_001243014 23457 Hs.511951 NM_019624 ENSG00000150967 ABCB9 EST122234|TAPL ATP binding cassette subfamily B member 9 protein-coding chr17-215 chr17 76872395 76872605 + 45.1 0.000 promoter-TSS (NM_198955) promoter-TSS (NM_198955) -147 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B protein-coding chr3-93 chr3 47009343 47009553 + 45.1 0.000 3' UTR (NM_015175, exon 54 of 54) 3' UTR (NM_015175, exon 54 of 54) -2094 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr4-32 chr4 128061051 128061261 + 45.1 0.000 promoter-TSS (NM_032239) promoter-TSS (NM_032239) -156 NM_178043 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr3-250 chr3 187702733 187702943 + 45.1 0.000 promoter-TSS (NM_001004312) promoter-TSS (NM_001004312) -281 NM_001004312 344892 Hs.567872 NM_001004312 ENSG00000198471 RTP2 Z3CXXC2 receptor transporter protein 2 protein-coding chr10-93 chr10 100186018 100186228 + 45.1 0.000 promoter-TSS (NM_001347856) promoter-TSS (NM_001347856) -94 NM_006459 10613 Hs.150087 NM_006459 ENSG00000107566 ERLIN1 C10orf69|Erlin-1|KE04|KEO4|SPFH1|SPG62 ER lipid raft associated 1 protein-coding chr2-121 chr2 120470338 120470548 + 45.1 0.000 Intergenic Intergenic -4094 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr6-40 chr6 148761102 148761312 + 45.1 0.000 intron (NM_005715, intron 1 of 7) intron (NM_005715, intron 1 of 7) 14177 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr13-25 chr13 51584131 51584341 + 45.1 0.000 promoter-TSS (NM_052950) promoter-TSS (NM_052950) -226 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr17-113 chr17 7035895 7036105 + 45.1 0.000 promoter-TSS (NM_201566) promoter-TSS (NM_201566) -15 NM_201566 201232 Hs.448010 NM_201566 ENSG00000174327 SLC16A13 MCT13 solute carrier family 16 member 13 protein-coding chr14-94 chr14 63204170 63204380 + 45.1 0.000 promoter-TSS (NM_020663) promoter-TSS (NM_020663) -168 NM_020663 57381 Hs.656339 NM_020663 ENSG00000126785 RHOJ ARHJ|RASL7B|TC10B|TCL ras homolog family member J protein-coding chr22-100 chr22 44699116 44699326 + 45.1 0.000 intron (NM_001198721, intron 2 of 9) intron (NM_001198721, intron 2 of 9) -2977 NM_181334 553158 Hs.102336 NM_181334 ENSG00000248405 PRR5-ARHGAP8 - PRR5-ARHGAP8 readthrough protein-coding chr2-167 chr2 86105518 86105728 + 45.0 0.000 promoter-TSS (NM_017952) promoter-TSS (NM_017952) 263 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr14-66 chr14 73760117 73760327 + 45.0 0.000 promoter-TSS (NM_194278) promoter-TSS (NM_194278) 76 NM_194278 91748 Hs.594157 NM_194278 ENSG00000156030 ELMSAN1 C14orf117|C14orf43|LSR68|MIDEAS|c14_5541 ELM2 and Myb/SANT domain containing 1 protein-coding chr21-19 chr21 37267397 37267607 + 45.0 0.000 promoter-TSS (NM_006052) promoter-TSS (NM_006052) -168 NM_006052 10311 Hs.369488 NM_006052 ENSG00000157538 VPS26C DCRA|DSCR3|DSCRA VPS26 endosomal protein sorting factor C protein-coding chr1-377 chr1 205172789 205172999 + 45.0 0.000 intron (NM_199462, intron 2 of 11) intron (NM_199462, intron 2 of 11) 38808 NM_199462 25778 Hs.6874 NM_015375 ENSG00000133059 DSTYK CAKUT1|DustyPK|HDCMD38P|RIP5|RIPK5|SPG23 dual serine/threonine and tyrosine protein kinase protein-coding chr1-299 chr1 205211594 205211804 + 45.0 0.000 promoter-TSS (NM_015375) promoter-TSS (NM_015375) 3 NM_199462 25778 Hs.6874 NM_015375 ENSG00000133059 DSTYK CAKUT1|DustyPK|HDCMD38P|RIP5|RIPK5|SPG23 dual serine/threonine and tyrosine protein kinase protein-coding chr16-191 chr16 88062629 88062839 + 45.0 0.000 intron (NM_001173539, intron 11 of 12) intron (NM_001173539, intron 11 of 12) 38251 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr22-39 chr22 39399722 39399932 + 45.0 0.000 promoter-TSS (NM_006116) promoter-TSS (NM_006116) 47 NM_153497 10454 Hs.507681 NM_006116 ENSG00000100324 TAB1 3'-Tab1|MAP3K7IP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 protein-coding chr12-80 chr12 49673633 49673843 + 45.0 0.000 intron (NM_001367835, intron 1 of 26) intron (NM_001367835, intron 1 of 26) 33667 NM_001367835 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr7-57 chr7 76359218 76359428 + 45.0 0.000 promoter-TSS (NM_012479) promoter-TSS (NM_012479) -332 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|EIEE56|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding chr3-136 chr3 158709742 158709952 + 45.0 0.000 intron (NM_206963, intron 3 of 5) intron (NM_206963, intron 3 of 5) 22610 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chrX-21 chrX 15335529 15335739 + 44.9 0.000 promoter-TSS (NM_002641) promoter-TSS (NM_002641) -80 NR_033836 5277 Hs.137154 NM_002641 ENSG00000165195 PIGA GPI3|MCAHS2|PIG-A|PNH1 phosphatidylinositol glycan anchor biosynthesis class A protein-coding chr8-11 chr8 140511807 140512017 + 44.9 0.000 promoter-TSS (NR_040712) promoter-TSS (NR_040712) -84 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr13-40 chr13 111194692 111194902 + 44.9 0.000 intron (NM_001113513, intron 1 of 19) HERV9-int|LTR|ERV1 8003 NM_001113513 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr10-89 chr10 132447794 132448004 + 44.9 0.000 non-coding (NR_149317, exon 3 of 3) non-coding (NR_149317, exon 3 of 3) 2710 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr3-137 chr3 9792506 9792716 + 44.9 0.000 promoter-TSS (NM_005718) promoter-TSS (NM_005718) 63 NM_005718 10093 Hs.323342 NM_005718 ENSG00000241553 ARPC4 ARC20|P20-ARC actin related protein 2/3 complex subunit 4 protein-coding chr11-212 chr11 65134939 65135149 + 44.9 0.000 promoter-TSS (NM_032431) promoter-TSS (NM_032431) -525 NM_032431 84447 Hs.75859 NM_032431 ENSG00000162298 SYVN1 DER3|HRD1 synoviolin 1 protein-coding chr11-177 chr11 66002204 66002414 + 44.9 0.000 promoter-TSS (NM_001242483) promoter-TSS (NM_001242483) -152 NM_001242484 84285 Hs.425178 NM_032325 ENSG00000175376 EIF1AD OBELIX|haponin eukaryotic translation initiation factor 1A domain containing protein-coding chr15-48 chr15 56465048 56465258 + 44.9 0.000 promoter-TSS (NM_018365) promoter-TSS (NM_018365) -16 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr8-64 chr8 128109009 128109219 + 44.9 0.000 Intergenic Intergenic -41002 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr11-106 chr11 73598273 73598483 + 44.9 0.000 promoter-TSS (NM_001286050) promoter-TSS (NM_001286050) -266 NM_001286051 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr8-52 chr8 17922646 17922856 + 44.8 0.000 promoter-TSS (NM_001315508) promoter-TSS (NM_001315508) -106 NM_001352660 5108 Hs.491148 NM_006197 ENSG00000078674 PCM1 PTC4|RET/PCM-1 pericentriolar material 1 protein-coding chr1-68 chr1 7783954 7784164 + 44.8 0.000 promoter-TSS (NM_001289863) promoter-TSS (NM_001289863) -128 NM_016831 8863 Hs.162200 NM_016831 ENSG00000049246 PER3 FASPS3|GIG13 period circadian regulator 3 protein-coding chr2-122 chr2 207711474 207711684 + 44.8 0.000 promoter-TSS (NM_001142300) promoter-TSS (NM_001142300) 39 NM_001142300 151195 Hs.471234 NM_152523 ENSG00000163249 CCNYL1 - cyclin Y like 1 protein-coding chr6-26 chr6 159762219 159762429 + 44.8 0.000 promoter-TSS (NM_001303253) promoter-TSS (NM_001303253) 8 NR_037166 100129518 Hs.712708 NR_037166 ENSG00000285427 SOD2-OT1 SOD2 SOD2 overlapping transcript 1 ncRNA chr18-28 chr18 63422489 63422699 + 44.8 0.000 promoter-TSS (NM_004869) promoter-TSS (NM_004869) -118 NM_004869 9525 Hs.126550 NM_004869 ENSG00000119541 VPS4B MIG1|SKD1|SKD1B|VPS4-2 vacuolar protein sorting 4 homolog B protein-coding chr22-90 chr22 40044370 40044580 + 44.8 0.000 promoter-TSS (NM_001024843) promoter-TSS (NM_001024843) 55 NR_163486 114841040 Hs.474880 NR_163486 LOC114841040 - uncharacterized LOC114841040 ncRNA chr18-13 chr18 12279179 12279389 + 44.8 0.000 Intergenic Intergenic 24923 NM_001318383 1149 Hs.249129 NM_001279 ENSG00000176194 CIDEA CIDE-A cell death inducing DFFA like effector a protein-coding chr5-48 chr5 140564483 140564693 + 44.8 0.000 promoter-TSS (NM_080670) promoter-TSS (NM_080670) 16 NM_006051 10307 Hs.529449 NM_006051 ENSG00000113108 APBB3 FE65L2|SRA amyloid beta precursor protein binding family B member 3 protein-coding chr2-382 chr2 47034255 47034465 + 44.8 0.000 intron (NM_001288951, intron 15 of 20) intron (NM_001288951, intron 15 of 20) -92505 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr8-59 chr8 98117060 98117270 + 44.8 0.000 promoter-TSS (NM_005836) promoter-TSS (NM_005836) 6 NM_005836 10247 Hs.18426 NM_005836 ENSG00000132541 RIDA HRSP12|P14.5|PSP|UK114|hp14.5 reactive intermediate imine deaminase A homolog protein-coding chr15-86 chr15 63089343 63089553 + 44.8 0.000 Intergenic Intergenic -32413 NM_032857 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr7-249 chr7 24477858 24478068 + 44.7 0.000 Intergenic Intergenic -95489 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr7-114 chr7 124929853 124930063 + 44.7 0.000 promoter-TSS (NR_003102) promoter-TSS (NR_003102) 25 NM_001042594 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr3-143 chr3 52670696 52670906 + 44.7 0.000 intron (NM_001366074, intron 5 of 30) FAM|SINE|Alu 14798 NM_001350074 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding chr5-185 chr5 150107994 150108204 + 44.7 0.000 intron (NM_005211, intron 1 of 21) L2b|LINE|L2 5273 NM_005211 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr21-13 chr21 46323849 46324059 + 44.7 0.000 promoter-TSS (NM_006031) promoter-TSS (NM_006031) -55 NM_058180 54058 Hs.236572 NM_058180 ENSG00000160298 C21orf58 - chromosome 21 open reading frame 58 protein-coding chr6-115 chr6 2531894 2532104 + 44.7 0.000 Intergenic MIR|SINE|MIR -102501 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr15-70 chr15 88638827 88639037 + 44.7 0.000 promoter-TSS (NM_001303237) promoter-TSS (NM_001303237) -84 NM_002201 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr15-59 chr15 62940742 62940952 + 44.7 0.000 Intergenic Intergenic -101900 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr7-69 chr7 7182341 7182551 + 44.5 0.000 promoter-TSS (NM_020156) promoter-TSS (NM_020156) -169 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr7-46 chr7 1138193 1138403 + 44.5 0.000 promoter-TSS (NM_001350968) promoter-TSS (NM_001350968) -41 NM_001350968 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr20-34 chr20 63865836 63866046 + 44.5 0.000 intron (NM_001243892, intron 1 of 5) intron (NM_001243892, intron 1 of 5) 671 NM_001243891 7165 Hs.473296 NM_003288 ENSG00000101150 TPD52L2 D54|TPD54 TPD52 like 2 protein-coding chr10-56 chr10 74176479 74176689 + 44.5 0.000 promoter-TSS (NM_001202449) promoter-TSS (NM_001202449) 95 NM_001123 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr1-171 chr1 33472426 33472636 + 44.5 0.000 promoter-TSS (NM_145238) promoter-TSS (NM_145238) -114 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr12-86 chr12 6944556 6944766 + 44.5 0.000 TTS (NR_023317) TTS (NR_023317) 639 NM_138425 113246 Hs.405913 NM_138425 ENSG00000111678 C12orf57 C10|GRCC10 chromosome 12 open reading frame 57 protein-coding chr4-222 chr4 96164867 96165077 + 44.5 0.000 Intergenic UCON12|Unknown|Unknown -145731 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr7-182 chr7 2517177 2517387 + 44.5 0.000 promoter-TSS (NM_002304) promoter-TSS (NM_002304) -581 NM_002304 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr9-149 chr9 128275922 128276132 + 44.5 0.000 promoter-TSS (NM_001366244) promoter-TSS (NM_001366244) -75 NM_004486 2801 Hs.155827 NM_004486 ENSG00000167110 GOLGA2 GM130 golgin A2 protein-coding chr2-134 chr2 46309785 46309995 + 44.5 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 12483 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr14-154 chr14 62692232 62692442 + 44.4 0.000 Intergenic Intergenic 353121 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr8-41 chr8 42391632 42391842 + 44.4 0.000 promoter-TSS (NM_005662) promoter-TSS (NM_005662) -24 NM_001135694 7419 Hs.699301 NM_005662 ENSG00000078668 VDAC3 HD-VDAC3|VDAC-3 voltage dependent anion channel 3 protein-coding chr11-109 chr11 66312886 66313096 + 44.4 0.000 Intergenic CpG 4053 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding chrX-14 chrX 130903232 130903442 + 44.4 0.000 promoter-TSS (NM_182314) promoter-TSS (NM_182314) -20 NM_182314 10495 Hs.171458 NM_006375 ENSG00000165675 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding chr19-288 chr19 40778045 40778255 + 44.4 0.000 promoter-TSS (NR_037791) promoter-TSS (NR_037791) -69 NR_037791 100529264 Hs.631539 NR_037791 RAB4B-EGLN2 EGLN2|EIT-6|EIT6|HIF-PH1|HPH-1|HPH-3|PHD1|RERT-lncRNA RAB4B-EGLN2 readthrough (NMD candidate) ncRNA chr14-122 chr14 54677354 54677564 + 44.4 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) -77374 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr4-243 chr4 112857543 112857753 + 44.4 0.000 intron (NM_001354275, intron 1 of 43) intron (NM_001354275, intron 1 of 43) -3339 NM_001354271 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr20-18 chr20 62238242 62238452 + 44.4 0.000 promoter-TSS (NM_001278649) promoter-TSS (NM_001278649) -174 NM_144498 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding chr1-269 chr1 8660494 8660704 + 44.4 0.000 intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 157041 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr3-122 chr3 129195939 129196149 + 44.4 0.000 Intergenic Intergenic -12148 NM_001127196 7555 Hs.518249 NM_003418 ENSG00000169714 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger nucleic acid binding protein protein-coding chr4-47 chr4 185396407 185396617 + 44.4 0.000 promoter-TSS (NM_181726) promoter-TSS (NM_181726) -329 NM_181726 353322 Hs.508154 NM_181726 ENSG00000186352 ANKRD37 Lrp2bp ankyrin repeat domain 37 protein-coding chr17-185 chr17 32127581 32127791 + 44.4 0.000 Intergenic Intergenic -14768 NM_001288758 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding chr19-244 chr19 48720848 48721058 + 44.4 0.000 exon (NM_017805, exon 12 of 12) exon (NM_017805, exon 12 of 12) -1228 NM_001130915 284358 Hs.191815 NM_182574 ENSG00000176909 MAMSTR MASTR MEF2 activating motif and SAP domain containing transcriptional regulator protein-coding chr20-58 chr20 35411981 35412191 + 44.4 0.000 promoter-TSS (NM_199487) promoter-TSS (NM_199487) 56 NM_199487 55245 Hs.726290 NM_018244 ENSG00000101019 UQCC1 BFZB|C20orf44|CBP3|UQCC ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding chr19-242 chr19 47257318 47257528 + 44.4 0.000 intron (NM_015603, intron 1 of 11) CpG 898 NM_015603 26093 Hs.227782 NM_015603 ENSG00000105321 CCDC9 - coiled-coil domain containing 9 protein-coding chr1-128 chr1 197201380 197201590 + 44.4 0.000 promoter-TSS (NM_001257965) promoter-TSS (NM_001257965) -19 NM_001257965 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr12-154 chr12 124910541 124910751 + 44.4 0.000 TTS (NM_021009) TTS (NM_021009) 4004 NM_021009 7316 Hs.520348 NM_021009 ENSG00000150991 UBC HMG20 ubiquitin C protein-coding chr8-53 chr8 27774346 27774556 + 44.3 0.000 promoter-TSS (NM_001017420) promoter-TSS (NM_001017420) -103 NM_001017420 157570 Hs.99480 NM_001017420 ENSG00000171320 ESCO2 2410004I17Rik|EFO2|EFO2p|RBS|hEFO2 establishment of sister chromatid cohesion N-acetyltransferase 2 protein-coding chr2-346 chr2 106956989 106957199 + 44.3 0.000 Intergenic Intergenic -69985 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr5-44 chr5 178859887 178860097 + 44.3 0.000 promoter-TSS (NM_058230) promoter-TSS (NM_058230) 39 NM_058230 117608 Hs.724051 NM_058230 ENSG00000178338 ZNF354B KID2 zinc finger protein 354B protein-coding chr10-136 chr10 68901069 68901279 + 44.3 0.000 promoter-TSS (NM_024045) promoter-TSS (NM_024045) -141 NM_024045 79009 Hs.522984 NM_024045 ENSG00000107625 DDX50 GU2|GUB|RH-II/GuB|mcdrh DExD-box helicase 50 protein-coding chr11-167 chr11 10933955 10934165 + 44.3 0.000 Intergenic Intergenic 75843 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr17-140 chr17 83203139 83203349 + 44.3 0.000 Intergenic Intergenic -23653 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr9-119 chr9 121278555 121278765 + 44.3 0.000 intron (NM_001353064, intron 2 of 19) intron (NM_001353064, intron 2 of 19) 6870 NR_103560 57000 Hs.522373 NM_020250 ENSG00000235865 GSN-AS1 C9orf31|MOST2 GSN antisense RNA 1 ncRNA chr19-200 chr19 16076249 16076459 + 44.3 0.000 promoter-TSS (NM_001367837) promoter-TSS (NM_001367837) -141 NM_001367837 7171 Hs.631618 NM_003290 ENSG00000167460 TPM4 HEL-S-108 tropomyosin 4 protein-coding chr3-116 chr3 194003197 194003407 + 44.3 0.000 intron (NR_033944, intron 1 of 2) CpG 357 NR_033944 647323 Hs.652830 NR_033944 ENSG00000214146 LINC02026 - long intergenic non-protein coding RNA 2026 ncRNA chr20-20 chr20 62302756 62302966 + 44.2 0.000 promoter-TSS (NM_175573) promoter-TSS (NM_175573) -35 NM_001281438 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr22-60 chr22 31107681 31107891 + 44.2 0.000 promoter-TSS (NM_080430) promoter-TSS (NM_080430) -218 NM_080430 140606 Hs.55940 NM_080430 ENSG00000198832 SELENOM SELM|SEPM selenoprotein M protein-coding chr1-150 chr1 53220404 53220614 + 44.2 0.000 intron (NM_017887, intron 1 of 7) CpG 125 NM_017887 54987 Hs.525391 NM_017887 ENSG00000162384 CZIB C1orf123 CXXC motif containing zinc binding protein protein-coding chr13-79 chr13 66210874 66211084 + 44.2 0.000 Intergenic L2c|LINE|L2 -7271 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr12-55 chr12 53079390 53079600 + 44.2 0.000 promoter-TSS (NM_032840) promoter-TSS (NM_032840) -105 NM_032840 84926 Hs.343334 NM_032840 ENSG00000167778 SPRYD3 - SPRY domain containing 3 protein-coding chr5-103 chr5 149434403 149434613 + 44.2 0.000 Intergenic Intergenic 3862 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr19-249 chr19 58305227 58305437 + 44.2 0.000 promoter-TSS (NR_144445) promoter-TSS (NR_144445) -42 NR_144445 105372481 Hs.435404 NR_144445 ENSG00000142396 ERVK3-1 - endogenous retrovirus group K3 member 1 ncRNA chr1-155 chr1 23691577 23691787 + 44.2 0.000 promoter-TSS (NM_000975) promoter-TSS (NM_000975) -97 NM_001199802 6135 Hs.719951 NM_000975 ENSG00000142676 RPL11 DBA7|GIG34|L11|uL5 ribosomal protein L11 protein-coding chr7-95 chr7 64665953 64666163 + 44.2 0.000 promoter-TSS (NM_001282359) promoter-TSS (NM_001282359) -25 NM_001282359 51427 Hs.50216 NM_016220 ENSG00000196247 ZNF107 Y8|ZFD25|ZNF588|smap-7 zinc finger protein 107 protein-coding chr2-105 chr2 118088218 118088428 + 44.2 0.000 promoter-TSS (NM_016133) promoter-TSS (NM_016133) -95 NM_001321330 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding chr2-58 chr2 128027336 128027546 + 44.2 0.000 promoter-TSS (NM_024545) promoter-TSS (NM_024545) -135 NM_024545 79595 Hs.32995 NM_024545 ENSG00000136715 SAP130 - Sin3A associated protein 130 protein-coding chr7-162 chr7 67937896 67938106 + 44.1 0.000 Intergenic LTR3B_|LTR|ERVK -82252 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr6-67 chr6 45505050 45505260 + 44.1 0.000 intron (NM_001015051, intron 6 of 7) intron (NM_001015051, intron 6 of 7) 82880 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr19-317 chr19 41439649 41439859 + 44.1 0.000 promoter-TSS (NM_001320841) promoter-TSS (NM_001320841) 158 NM_001167870 55101 Hs.351099 NM_018035 ENSG00000105341 DMAC2 ATP5SL distal membrane arm assembly complex 2 protein-coding chr9-138 chr9 135952065 135952275 + 44.1 0.000 intron (NM_016172, intron 3 of 9) intron (NM_016172, intron 3 of 9) 9203 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr3-102 chr3 105366489 105366699 + 44.1 0.000 promoter-TSS (NM_001627) promoter-TSS (NM_001627) -119 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr2-44 chr2 112055091 112055301 + 44.1 0.000 promoter-TSS (NM_032824) promoter-TSS (NM_032824) -73 NM_001329914 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr10-64 chr10 89701302 89701512 + 44.1 0.000 promoter-TSS (NM_001284259) promoter-TSS (NM_001284259) -183 NM_001284259 9585 Hs.240 NM_016195 ENSG00000138182 KIF20B CT90|KRMP1|MPHOSPH1|MPP-1|MPP1 kinesin family member 20B protein-coding chr14-44 chr14 105093796 105094006 + 44.1 0.000 promoter-TSS (NR_110546) promoter-TSS (NR_110546) -246 NR_110546 102723354 Hs.569410 NR_110546 LINC02298 - long intergenic non-protein coding RNA 2298 ncRNA chr16-118 chr16 2429240 2429450 + 44.1 0.000 promoter-TSS (NM_001323538) promoter-TSS (NM_001323538) -102 NM_001323538 899 Hs.1973 NM_001761 ENSG00000162063 CCNF FBX1|FBXO1 cyclin F protein-coding chr6-37 chr6 11921070 11921280 + 44.1 0.000 Intergenic Intergenic 80069 NR_125853 101928253 Hs.128163 NR_125853 LOC101928253 - uncharacterized LOC101928253 ncRNA chr1-347 chr1 85583899 85584109 + 44.1 0.000 TTS (NM_001554) TTS (NM_001554) 3243 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr15-58 chr15 33194829 33195039 + 44.0 0.000 promoter-TSS (NM_001277314) promoter-TSS (NM_001277314) -201 NM_001277313 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr1-365 chr1 21149919 21150129 + 44.0 0.000 intron (NM_001198803, intron 1 of 12) intron (NM_001198803, intron 1 of 12) 18015 NM_001198803 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr19-320 chr19 1479150 1479360 + 44.0 0.000 promoter-TSS (NM_152482) promoter-TSS (NM_152482) -40 NM_152482 148223 Hs.532840 NM_152482 ENSG00000119559 C19orf25 - chromosome 19 open reading frame 25 protein-coding chr3-82 chr3 17742721 17742931 + 44.0 0.000 promoter-TSS (NM_001349077) promoter-TSS (NM_001349077) -87 NM_001349083 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr12-127 chr12 49018644 49018854 + 44.0 0.000 promoter-TSS (NM_002733) promoter-TSS (NM_002733) 27 NM_002733 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding chr17-162 chr17 60392193 60392403 + 44.0 0.000 promoter-TSS (NM_032582) promoter-TSS (NM_032582) -165 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr5-74 chr5 177600144 177600354 + 44.0 0.000 exon (NM_007255, exon 1 of 6) exon (NM_007255, exon 1 of 6) 117 NM_007255 11285 Hs.455109 NM_007255 ENSG00000027847 B4GALT7 EDSP1|EDSSLA|EDSSPD1|XGALT1|XGPT|XGPT1 beta-1,4-galactosyltransferase 7 protein-coding chr19-405 chr19 42113764 42113974 + 44.0 0.000 intron (NM_001207026, intron 5 of 12) intron (NM_001207026, intron 5 of 12) 18577 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr12-57 chr12 48852165 48852375 + 44.0 0.000 promoter-TSS (NM_004818) promoter-TSS (NM_004818) -107 NM_004818 9416 Hs.130098 NM_004818 ENSG00000174243 DDX23 PRPF28|SNRNP100|U5-100K|U5-100KD|prp28 DEAD-box helicase 23 protein-coding chr11-338 chr11 119101931 119102141 + 44.0 0.000 promoter-TSS (NM_001382) promoter-TSS (NM_001382) -183 NM_001382 1798 Hs.524081 NM_001382 ENSG00000172269 DPAGT1 ALG7|CDG-Ij|CDG1J|CMS13|CMSTA2|D11S366|DGPT|DPAGT|DPAGT2|G1PT|GPT|UAGT|UGAT dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 protein-coding chr7-55 chr7 143288214 143288424 + 44.0 0.000 promoter-TSS (NM_032983) promoter-TSS (NM_032983) -32 NM_032983 835 Hs.368982 NM_001224 ENSG00000106144 CASP2 CASP-2|ICH1|NEDD-2|NEDD2|PPP1R57 caspase 2 protein-coding chr2-216 chr2 111667590 111667800 + 44.0 0.000 Intergenic Intergenic 103439 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr5-32 chr5 34929293 34929503 + 44.0 0.000 promoter-TSS (NM_001348420) promoter-TSS (NM_001348420) -161 NM_001012339 134218 Hs.131887 NM_194283 ENSG00000168724 DNAJC21 BMFS3|DNAJA5|GS3|JJJ1 DnaJ heat shock protein family (Hsp40) member C21 protein-coding chr2-240 chr2 102227750 102227960 + 44.0 0.000 intron (NM_001351447, intron 7 of 9) intron (NM_001351447, intron 7 of 9) 40541 NM_001351446 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding chr20-35 chr20 23358134 23358344 + 44.0 0.000 promoter-TSS (NR_109884) promoter-TSS (NR_109884) -112 NR_109884 100505683 Hs.140295 NR_109884 ENSG00000232645 LINC01431 - long intergenic non-protein coding RNA 1431 ncRNA chr3-111 chr3 138115181 138115391 + 43.8 0.000 intron (NM_173543, intron 1 of 15) CpG 322 NM_173543 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr12-105 chr12 56079134 56079344 + 43.8 0.000 promoter-TSS (NM_001982) promoter-TSS (NM_001982) -786 NM_001982 2065 Hs.118681 NM_001982 ENSG00000065361 ERBB3 ErbB-3|FERLK|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 erb-b2 receptor tyrosine kinase 3 protein-coding chr2-139 chr2 219543821 219544031 + 43.8 0.000 promoter-TSS (NM_001195731) promoter-TSS (NM_001195731) -102 NM_001005209 130612 Hs.446664 NM_001005209 ENSG00000188760 TMEM198 TMEM198A transmembrane protein 198 protein-coding chr10-77 chr10 13302247 13302457 + 43.8 0.000 Intergenic CpG -2222 NM_001323082 5264 Hs.498732 NM_006214 ENSG00000107537 PHYH LN1|LNAP1|PAHX|PHYH1|RD phytanoyl-CoA 2-hydroxylase protein-coding chr1-296 chr1 145996609 145996819 + 43.8 0.000 promoter-TSS (NM_001313972) promoter-TSS (NM_001313972) -135 NM_006472 10628 Hs.533977 NM_006472 ENSG00000265972 TXNIP ARRDC6|EST01027|HHCPA78|THIF|VDUP1 thioredoxin interacting protein protein-coding chr19-268 chr19 6110597 6110807 + 43.8 0.000 promoter-TSS (NM_134433) promoter-TSS (NM_134433) -202 NM_000635 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chrY-1 chrY 11305233 11305443 + 43.8 0.000 Intergenic BSR/Beta|Satellite|Satellite 1116252 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr8-130 chr8 102756246 102756456 + 43.8 0.000 Intergenic Intergenic -50471 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr11-160 chr11 66677938 66678148 + 43.8 0.000 promoter-TSS (NM_031492) promoter-TSS (NM_031492) -156 NM_001286135 83759 Hs.618713 NM_031492 ENSG00000173914 RBM4B RBM30|RBM4L|ZCCHC15|ZCCHC21B|ZCRB3B RNA binding motif protein 4B protein-coding chr9-142 chr9 121201876 121202086 + 43.8 0.000 promoter-TSS (NM_016322) promoter-TSS (NM_016322) -112 NM_016322 51552 Hs.371563 NM_016322 ENSG00000119396 RAB14 FBP|RAB-14 RAB14, member RAS oncogene family protein-coding chr22-32 chr22 20495883 20496093 + 43.7 0.000 promoter-TSS (NM_032775) promoter-TSS (NM_032775) -193 NR_033825 84861 Hs.517419 NM_032775 ENSG00000099910 KLHL22 KELCHL kelch like family member 22 protein-coding chr14-67 chr14 69766892 69767102 + 43.7 0.000 promoter-TSS (NM_006925) promoter-TSS (NM_006925) -145 NM_001039465 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr11-176 chr11 45089294 45089504 + 43.7 0.000 Intergenic L2b|LINE|L2 -4614 NM_001359633 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr2-182 chr2 24456711 24456921 + 43.7 0.000 Intergenic Intergenic -34438 NM_003743 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr3-281 chr3 45477078 45477288 + 43.7 0.000 intron (NM_001368263, intron 9 of 20) intron (NM_001368263, intron 9 of 20) 32362 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr6-35 chr6 11093636 11093846 + 43.7 0.000 promoter-TSS (NM_001135575) promoter-TSS (NM_001135575) -93 NM_001135575 221710 Hs.656600 NM_001135575 ENSG00000224531 SMIM13 C6orf228 small integral membrane protein 13 protein-coding chr1-338 chr1 85550965 85551175 + 43.7 0.000 intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 27130 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr7-196 chr7 64313870 64314080 + 43.7 0.000 promoter-TSS (NM_001170905) promoter-TSS (NM_001170905) 14 NM_001170905 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding chr7-215 chr7 44606585 44606795 + 43.7 0.000 promoter-TSS (NM_001003941) promoter-TSS (NM_001003941) 63 NM_001003941 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr1-157 chr1 32817374 32817584 + 43.7 0.000 promoter-TSS (NM_001256121) promoter-TSS (NM_001256121) 37 NM_001256121 64766 Hs.440880 NM_022753 ENSG00000116497 S100PBP S100PBPR S100P binding protein protein-coding chr17-110 chr17 3636297 3636507 + 43.7 0.000 promoter-TSS (NM_013276) promoter-TSS (NM_013276) -66 NM_001031681 1497 Hs.187667 NM_004937 ENSG00000040531 CTNS CTNS-LSB|PQLC4|SLC66A4 cystinosin, lysosomal cystine transporter protein-coding chr19-205 chr19 58575500 58575710 + 43.7 0.000 TTS (NR_027334) TTS (NR_027334) 206 NR_026052 65996 Hs.541177 NM_023939 ENSG00000213753 CENPBD1P1 - CENPB DNA-binding domains containing 1 pseudogene 1 pseudo chr1-239 chr1 235328231 235328441 + 43.7 0.000 promoter-TSS (NR_036605) promoter-TSS (NR_036605) -102 NM_001037277 9453 Hs.730768 NM_004837 ENSG00000152904 GGPS1 GGPPS|GGPPS1 geranylgeranyl diphosphate synthase 1 protein-coding chr5-52 chr5 138543284 138543494 + 43.7 0.000 promoter-TSS (NM_001291975) promoter-TSS (NM_001291975) -153 NM_001364160 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr22-87 chr22 45212344 45212554 + 43.7 0.000 promoter-TSS (NM_015264) promoter-TSS (NM_015264) 17 NM_015264 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr2-45 chr2 158456714 158456924 + 43.7 0.000 promoter-TSS (NM_001304971) promoter-TSS (NM_001304971) -61 NM_001304971 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr5-50 chr5 62403824 62404034 + 43.6 0.000 promoter-TSS (NM_014473) promoter-TSS (NM_014473) -24 NM_001348077 27292 Hs.731665 NM_014473 ENSG00000086189 DIMT1 DIM1|DIMT1L|HSA9761|HUSSY5 DIMT1 rRNA methyltransferase and ribosome maturation factor protein-coding chr5-126 chr5 78984559 78984769 + 43.6 0.000 intron (NM_198709, intron 2 of 7) CpG 646 NM_000046 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr2-242 chr2 176491285 176491495 + 43.6 0.000 Intergenic Intergenic 109662 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr13-31 chr13 52012192 52012402 + 43.6 0.000 promoter-TSS (NR_036571) promoter-TSS (NR_036571) -101 NR_036571 440138 Hs.512963 NM_001004127 ENSG00000253710 ALG11 CDG1P|GT8 ALG11 alpha-1,2-mannosyltransferase protein-coding chr17-105 chr17 752307 752517 + 43.6 0.000 promoter-TSS (NR_024120) promoter-TSS (NR_024120) 79 NR_024120 100131454 Hs.662289 NR_024120 ENSG00000231784 DBIL5P ELP2P diazepam binding inhibitor-like 5, pseudogene pseudo chr9-79 chr9 128552188 128552398 + 43.6 0.000 promoter-TSS (NM_001130438) promoter-TSS (NM_001130438) -294 NM_001195532 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr8-61 chr8 23246721 23246931 + 43.6 0.000 exon (NM_001363183, exon 1 of 9) exon (NM_001363183, exon 1 of 9) 185 NM_001363183 91782 Hs.5019 NM_152272 ENSG00000147457 CHMP7 - charged multivesicular body protein 7 protein-coding chr3-248 chr3 101677170 101677380 + 43.6 0.000 promoter-TSS (NM_014415) promoter-TSS (NM_014415) -143 NM_014415 27107 Hs.655286 NM_014415 ENSG00000066422 ZBTB11 MRT69|ZNF-U69274|ZNF913 zinc finger and BTB domain containing 11 protein-coding chr10-113 chr10 124736547 124736757 + 43.6 0.000 intron (NM_014661, intron 1 of 4) intron (NM_014661, intron 1 of 4) 7726 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr4-104 chr4 151099318 151099528 + 43.6 0.000 promoter-TSS (NM_001006) promoter-TSS (NM_001006) -150 NM_001267699 6189 Hs.356572 NM_001006 ENSG00000145425 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding chr7-228 chr7 47932047 47932257 + 43.6 0.000 intron (NM_138295, intron 4 of 56) intron (NM_138295, intron 4 of 56) 16339 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr1-180 chr1 24745115 24745325 + 43.6 0.000 promoter-TSS (NM_013943) promoter-TSS (NM_013943) -227 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr12-198 chr12 26369663 26369873 + 43.6 0.000 intron (NM_002223, intron 55 of 56) MER21C|LTR|ERVL 174195 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr16-72 chr16 46884182 46884392 + 43.6 0.000 promoter-TSS (NM_133443) promoter-TSS (NM_133443) -75 NM_133443 84706 Hs.460693 NM_133443 ENSG00000166123 GPT2 ALT2|GPT 2|MRT49 glutamic--pyruvic transaminase 2 protein-coding chr2-179 chr2 176002097 176002307 + 43.6 0.000 promoter-TSS (NM_030650) promoter-TSS (NM_030650) 65 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr19-209 chr19 36127990 36128200 + 43.6 0.000 Intergenic CpG -11971 NM_001302632 826 Hs.515371 NM_001749 ENSG00000126247 CAPNS1 CALPAIN4|CANP|CANPS|CAPN4|CDPS|CSS1 calpain small subunit 1 protein-coding chr12-191 chr12 26274735 26274945 + 43.6 0.000 Intergenic Intergenic 79267 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr9-129 chr9 113410442 113410652 + 43.5 0.000 promoter-TSS (NM_001278629) promoter-TSS (NM_001278629) 128 NM_017443 54107 Hs.108112 NM_017443 ENSG00000148229 POLE3 CHARAC17|CHRAC17|CHRAC2|YBL1|p17 DNA polymerase epsilon 3, accessory subunit protein-coding chr9-247 chr9 127021816 127022026 + 43.5 0.000 intron (NM_001190729, intron 4 of 17) intron (NM_001190729, intron 4 of 17) 59696 NM_001190728 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr11-164 chr11 73309253 73309463 + 43.5 0.000 promoter-TSS (NR_147696) promoter-TSS (NR_147696) 3 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr15-41 chr15 90388008 90388218 + 43.5 0.000 promoter-TSS (NM_003870) promoter-TSS (NM_003870) -129 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr20-33 chr20 56392313 56392523 + 43.5 0.000 promoter-TSS (NM_001033522) promoter-TSS (NM_001033522) 47 NM_001033521 1477 Hs.172865 NM_001324 ENSG00000101138 CSTF1 CstF-50|CstFp50 cleavage stimulation factor subunit 1 protein-coding chr14-119 chr14 101408597 101408807 + 43.5 0.000 promoter-TSS (NR_126006) promoter-TSS (NR_126006) -780 NR_126006 338002 Hs.124848 NR_126006 ENSG00000259023 LINC00524 C14orf71 long intergenic non-protein coding RNA 524 ncRNA chr4-118 chr4 73069565 73069775 + 43.5 0.000 promoter-TSS (NM_001297732) promoter-TSS (NM_001297732) 46 NM_173827 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding chr7-239 chr7 55325520 55325730 + 43.5 0.000 Intergenic Intergenic -39823 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr2-90 chr2 208265997 208266207 + 43.5 0.000 promoter-TSS (NM_015040) promoter-TSS (NM_015040) -153 NM_015040 200576 Hs.744997 NM_015040 ENSG00000115020 PIKFYVE CFD|FAB1|HEL37|PIP5K|PIP5K3|ZFYVE29 phosphoinositide kinase, FYVE-type zinc finger containing protein-coding chr11-207 chr11 57205121 57205331 + 43.5 0.000 Intergenic Intergenic 23273 NM_001005210 219527 Hs.199853 NM_001005210 ENSG00000183908 LRRC55 - leucine rich repeat containing 55 protein-coding chr19-362 chr19 40806847 40807057 + 43.5 0.000 intron (NR_037791, intron 9 of 11) intron (NR_037791, intron 9 of 11) 4148 NR_144551 171523 Hs.656713 NR_144551 ENSG00000233622 CYP2T1P CYP2T2P cytochrome P450 family 2 subfamily T member 1, pseudogene pseudo chr19-361 chr19 40613887 40614097 + 43.5 0.000 exon (NM_001042545, exon 18 of 30) exon (NM_001042545, exon 18 of 30) 12623 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chr2-80 chr2 178451159 178451369 + 43.5 0.000 promoter-TSS (NM_001353777) promoter-TSS (NM_001353777) -89 NM_001316362 8575 Hs.570274 NM_003690 ENSG00000180228 PRKRA DYT16|HSD14|PACT|RAX protein activator of interferon induced protein kinase EIF2AK2 protein-coding chr19-260 chr19 11597258 11597468 + 43.5 0.000 promoter-TSS (NM_145295) promoter-TSS (NM_145295) -120 NM_001290084 199692 Hs.526665 NM_145295 ENSG00000198551 ZNF627 - zinc finger protein 627 protein-coding chr1-346 chr1 45583346 45583556 + 43.5 0.000 promoter-TSS (NM_001195193) promoter-TSS (NM_001195193) -537 NM_001195193 4678 Hs.319334 NM_002482 ENSG00000132780 NASP FLB7527|HMDRA1|PRO1999 nuclear autoantigenic sperm protein protein-coding chr9-192 chr9 113275419 113275629 + 43.5 0.000 promoter-TSS (NM_139286) promoter-TSS (NM_139286) 48 NM_139286 246184 Hs.727648 NM_139286 ENSG00000176386 CDC26 ANAPC12|APC12|C9orf17 cell division cycle 26 protein-coding chr7-164 chr7 56106355 56106565 + 43.5 0.000 promoter-TSS (NM_016139) promoter-TSS (NM_016139) 16 NM_016139 51142 Hs.389996 NM_016139 ENSG00000106153 CHCHD2 C7orf17|MIX17B|MNRR1|NS2TP|PARK22 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding chr2-47 chr2 25041990 25042200 + 43.5 0.000 promoter-TSS (NM_001319099) promoter-TSS (NM_001319099) 19 NM_014971 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr6-124 chr6 328128 328338 + 43.4 0.000 intron (NR_104473, intron 3 of 5) intron (NR_104473, intron 3 of 5) 36176 NM_001286555 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr18-19 chr18 24076378 24076588 + 43.4 0.000 intron (NM_001135993, intron 4 of 13) intron (NM_001135993, intron 4 of 13) -36844 NM_001292030 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr2-280 chr2 150466866 150467076 + 43.4 0.000 Intergenic Intergenic 20724 NM_005168 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr18-27 chr18 79485251 79485461 + 43.4 0.000 intron (NM_001278672, intron 8 of 8) intron (NM_001278672, intron 8 of 8) 85057 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr1-141 chr1 2381794 2382004 + 43.4 0.000 intron (NR_125361, intron 5 of 6) intron (NR_125361, intron 5 of 6) 9655 NM_001301060 79906 Hs.642701 NM_024848 ENSG00000116151 MORN1 - MORN repeat containing 1 protein-coding chr2-211 chr2 27799411 27799621 + 43.4 0.000 intron (NM_022128, intron 7 of 7) intron (NM_022128, intron 7 of 7) 27797 NM_004891 9553 Hs.515879 NM_004891 ENSG00000243147 MRPL33 C2orf1|L33mt|MRP-L33|RPL33L mitochondrial ribosomal protein L33 protein-coding chr15-71 chr15 92831873 92832083 + 43.4 0.000 Intergenic Intergenic 36494 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr6-102 chr6 38262078 38262288 + 43.4 0.000 intron (NM_052893, intron 9 of 11) intron (NM_052893, intron 9 of 11) -219413 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr10-92 chr10 97292563 97292773 + 43.4 0.000 promoter-TSS (NR_037909) promoter-TSS (NR_037909) 5 NR_037909 100533184 Hs.80305 NR_037909 ENSG00000269891 ARHGAP19-SLIT1 ARHGAP19 ARHGAP19-SLIT1 readthrough (NMD candidate) ncRNA chr8-24 chr8 144137676 144137886 + 43.4 0.000 promoter-TSS (NM_016458) promoter-TSS (NM_016458) 7 NM_016458 51236 Hs.300224 NM_016458 ENSG00000235173 HGH1 BRP16|BRP16L|C8orf30A|C8orf30B|FAM203A|FAM203B HGH1 homolog protein-coding chr17-172 chr17 81527709 81527919 + 43.4 0.000 promoter-TSS (NM_001077182) promoter-TSS (NM_001077182) -563 NM_012418 25794 Hs.118555 NM_012418 ENSG00000186765 FSCN2 RFSN|RP30 fascin actin-bundling protein 2, retinal protein-coding GL000219.1-1 GL000219.1 42512 42722 + 43.4 0.000 NA NA NA NA chr9-217 chr9 121398468 121398678 + 43.2 0.000 Intergenic ERVL-E-int|LTR|ERVL -28269 NM_001270527 2040 Hs.253903 NM_004099 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding chr1-213 chr1 43358792 43359002 + 43.2 0.000 promoter-TSS (NM_001255) promoter-TSS (NM_001255) -84 NM_001255 991 Hs.524947 NM_001255 ENSG00000117399 CDC20 CDC20A|bA276H19.3|p55CDC cell division cycle 20 protein-coding chr11-285 chr11 72814138 72814348 + 43.2 0.000 promoter-TSS (NM_033388) promoter-TSS (NM_033388) -168 NM_033388 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr5-58 chr5 139104948 139105158 + 43.2 0.000 intron (NM_022464, intron 3 of 9) intron (NM_022464, intron 3 of 9) 93315 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr14-99 chr14 31070562 31070772 + 43.2 0.000 intron (NM_001128126, intron 3 of 5) intron (NM_001128126, intron 3 of 5) 44024 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 subunit sigma 1 protein-coding chr7-159 chr7 5692305 5692515 + 43.2 0.000 intron (NM_207111, intron 13 of 16) intron (NM_207111, intron 13 of 16) -11949 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr11-312 chr11 61297843 61298053 + 43.2 0.000 Intergenic MER134|DNA?|DNA? -2632 NM_152718 220001 Hs.60640 NM_152718 ENSG00000167992 VWCE URG11|VWC1 von Willebrand factor C and EGF domains protein-coding chr10-99 chr10 122954113 122954323 + 43.2 0.000 promoter-TSS (NM_024942) promoter-TSS (NM_024942) 9 NM_024942 80007 Hs.501286 NM_024942 ENSG00000119965 C10orf88 - chromosome 10 open reading frame 88 protein-coding chr10-105 chr10 102918261 102918471 + 43.2 0.000 promoter-TSS (NM_017649) promoter-TSS (NM_017649) -31 NR_160733 107984265 NR_160733 LOC107984265 - uncharacterized LOC107984265 ncRNA chr8-131 chr8 106725919 106726129 + 43.2 0.000 promoter-TSS (NM_001198535) promoter-TSS (NM_001198535) -83 NM_001198534 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr11-311 chr11 36431923 36432133 + 43.2 0.000 intron (NM_001160167, intron 5 of 8) intron (NM_001160167, intron 5 of 8) 31031 NM_001160169 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr13-133 chr13 78192815 78193025 + 43.2 0.000 intron (NR_047001, intron 2 of 5) ERVL-E-int|LTR|ERVL 138065 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr11-173 chr11 68212745 68212955 + 43.2 0.000 intron (NR_161380, intron 1 of 10) CpG 446 NM_001369424 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr11-485 chr11 47143367 47143577 + 43.2 0.000 intron (NM_001003677, intron 4 of 8) intron (NM_001003677, intron 4 of 8) 33407 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr14-62 chr14 31026461 31026671 + 43.1 0.000 promoter-TSS (NM_014574) promoter-TSS (NM_014574) -77 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 subunit sigma 1 protein-coding chr1-306 chr1 44807422 44807632 + 43.1 0.000 promoter-TSS (NM_001136537) promoter-TSS (NM_001136537) -242 NM_001013632 343521 Hs.585137 NM_001013632 ENSG00000188396 TCTEX1D4 - Tctex1 domain containing 4 protein-coding chr5-187 chr5 157948861 157949071 + 43.1 0.000 Intergenic Intergenic -89821 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr16-193 chr16 75555234 75555444 + 43.1 0.000 intron (NR_074083, intron 2 of 6) intron (NR_074083, intron 2 of 6) 913 NM_001077418 79583 Hs.156784 NM_001077416 ENSG00000205084 TMEM231 ALYE870|JBTS20|MKS11|PRO1886 transmembrane protein 231 protein-coding chr11-254 chr11 44862449 44862659 + 43.1 0.000 intron (NM_130783, intron 3 of 9) L2a|LINE|L2 87606 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr15-36 chr15 68229479 68229689 + 43.1 0.000 exon (NM_017882, exon 1 of 7) exon (NM_017882, exon 1 of 7) 144 NM_017882 54982 Hs.584921 NM_017882 ENSG00000128973 CLN6 CLN4A|HsT18960|nclf CLN6 transmembrane ER protein protein-coding chr16-105 chr16 28823905 28824115 + 43.1 0.000 intron (NM_001308230, intron 1 of 22) CpG 962 NM_148416 11273 Hs.460499 NM_007245 ENSG00000168488 ATXN2L A2D|A2LG|A2LP|A2RP ataxin 2 like protein-coding chr7-103 chr7 6081428 6081638 + 43.1 0.000 Intergenic CpG -22304 NM_001134335 27102 Hs.520205 NM_014413 ENSG00000086232 EIF2AK1 HCR|HRI eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding chr11-300 chr11 36594321 36594531 + 43.1 0.000 promoter-TSS (NM_138787) promoter-TSS (NM_138787) -67 NM_138787 119710 Hs.159376 NM_138787 ENSG00000166352 C11orf74 HEPIS|NWC chromosome 11 open reading frame 74 protein-coding chr17-118 chr17 76737403 76737613 + 43.1 0.000 promoter-TSS (NM_001353018) promoter-TSS (NM_001353018) 7 NR_148242 79157 Hs.73965 NM_024311 ENSG00000092931 MFSD11 ET major facilitator superfamily domain containing 11 protein-coding chr2-68 chr2 61538434 61538644 + 43.1 0.000 promoter-TSS (NM_003400) promoter-TSS (NM_003400) -183 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr7-191 chr7 105776115 105776325 + 43.1 0.000 intron (NM_152749, intron 3 of 3) intron (NM_152749, intron 3 of 3) -97058 NM_138495 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr6-36 chr6 56542814 56543024 + 43.0 0.000 intron (NM_001144770, intron 53 of 94) CpG 99970 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr2-261 chr2 237687779 237687989 + 43.0 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -4280 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr6-24 chr6 43369597 43369807 + 43.0 0.000 promoter-TSS (NM_014345) promoter-TSS (NM_014345) -55 NM_014345 24149 Hs.509718 NM_014345 ENSG00000171467 ZNF318 HRIHFB2436|TZF|ZFP318 zinc finger protein 318 protein-coding chr1-310 chr1 156456604 156456814 + 43.0 0.000 Intergenic Intergenic -27161 NR_135262 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr10-82 chr10 68527370 68527580 + 43.0 0.000 promoter-TSS (NM_001324313) promoter-TSS (NM_001324313) 48 NM_152707 8034 Hs.180408 NM_152707 ENSG00000122912 SLC25A16 D10S105E|GDA|GDC|HGT.1|ML7|hML7 solute carrier family 25 member 16 protein-coding chr5-69 chr5 140547541 140547751 + 43.0 0.000 promoter-TSS (NM_003732) promoter-TSS (NM_003732) -16 NM_003732 8637 Hs.594084 NM_003732 ENSG00000243056 EIF4EBP3 4E-BP3|4EBP3 eukaryotic translation initiation factor 4E binding protein 3 protein-coding chr12-175 chr12 49056086 49056296 + 43.0 0.000 promoter-TSS (NM_003482) promoter-TSS (NM_003482) -867 NM_003482 8085 Hs.731384 NM_003482 ENSG00000167548 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine methyltransferase 2D protein-coding chr2-136 chr2 219229640 219229850 + 43.0 0.000 promoter-TSS (NM_018089) promoter-TSS (NM_018089) -61 NM_018089 55139 Hs.437647 NM_018089 ENSG00000163516 ANKZF1 Vms1|ZNF744 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 protein-coding chr1-226 chr1 151254731 151254941 + 43.0 0.000 intron (NM_001330692, intron 1 of 9) intron (NM_001330692, intron 1 of 9) 102 NM_002810 5710 Hs.505059 NM_002810 ENSG00000159352 PSMD4 AF|AF-1|ASF|MCB1|Rpn10|S5A|pUB-R5 proteasome 26S subunit, non-ATPase 4 protein-coding chr17-98 chr17 42744824 42745034 + 43.0 0.000 intron (NM_001991, intron 1 of 20) CpG 111 NM_001991 2145 Hs.194669 NM_001991 ENSG00000108799 EZH1 KMT6B enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding chr2-192 chr2 160270131 160270341 + 43.0 0.000 intron (NR_103775, intron 1 of 1) CpG 1659 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chr2-60 chr2 109614005 109614215 + 42.9 0.000 promoter-TSS (NM_178584) promoter-TSS (NM_178584) -144 NM_001321503 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr10-145 chr10 73966139 73966349 + 42.9 0.000 Intergenic Intergenic -31870 NM_014000 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr22-59 chr22 46250087 46250297 + 42.9 0.000 intron (NM_207327, intron 1 of 3) CpG 101 NM_207327 150383 Hs.103110 NM_207327 ENSG00000205643 CDPF1 C22orf40 cysteine rich DPF motif domain containing 1 protein-coding chr3-170 chr3 184812119 184812329 + 42.9 0.000 promoter-TSS (NM_015303) promoter-TSS (NM_015303) 58 NR_146114 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr18-23 chr18 70205790 70206000 + 42.9 0.000 promoter-TSS (NM_173630) promoter-TSS (NM_173630) -208 NM_001318520 25914 Hs.654809 NM_173630 ENSG00000176225 RTTN MSSP rotatin protein-coding chr9-173 chr9 134684366 134684576 + 42.9 0.000 intron (NM_001278074, intron 1 of 65) intron (NM_001278074, intron 1 of 65) -31628 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr7-168 chr7 25125339 25125549 + 42.9 0.000 promoter-TSS (NM_018947) promoter-TSS (NM_018947) -83 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr19-409 chr19 3451102 3451312 + 42.9 0.000 intron (NM_001245002, intron 7 of 10) L1MB7|LINE|L1 29318 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr3-175 chr3 14125741 14125951 + 42.9 0.000 promoter-TSS (NM_144636) promoter-TSS (NM_144636) 906 NM_024334 79188 Hs.517817 NM_024334 ENSG00000170876 TMEM43 ARVC5|ARVD5|EDMD7|LUMA transmembrane protein 43 protein-coding chr3-206 chr3 31004216 31004426 + 42.9 0.000 Intergenic Intergenic -109660 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr12-33 chr12 53451974 53452184 + 42.9 0.000 promoter-TSS (NM_001128911) promoter-TSS (NM_001128911) -23 NM_001128911 5094 Hs.546271 NM_005016 ENSG00000197111 PCBP2 HNRNPE2|HNRPE2|hnRNP-E2 poly(rC) binding protein 2 protein-coding chr1-258 chr1 154937009 154937219 + 42.9 0.000 promoter-TSS (NM_001323011) promoter-TSS (NM_001323011) -395 NM_001323011 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr17-157 chr17 75154534 75154744 + 42.8 0.000 promoter-TSS (NM_016185) promoter-TSS (NM_016185) 44 NR_109933 51155 Hs.532803 NM_016185 ENSG00000189159 JPT1 ARM2|HN1|HN1A Jupiter microtubule associated homolog 1 protein-coding chr19-190 chr19 4007390 4007600 + 42.8 0.000 promoter-TSS (NM_015897) promoter-TSS (NM_015897) -241 NM_015897 51588 Hs.105779 NM_015897 ENSG00000105229 PIAS4 PIAS-gamma|PIASY|Piasg|ZMIZ6 protein inhibitor of activated STAT 4 protein-coding chr2-77 chr2 241702427 241702637 + 42.8 0.000 intron (NM_032329, intron 1 of 7) CpG 493 NM_032329 84289 Hs.529172 NM_032329 ENSG00000168395 ING5 p28ING5 inhibitor of growth family member 5 protein-coding chr11-224 chr11 74949060 74949270 + 42.8 0.000 promoter-TSS (NM_182969) promoter-TSS (NM_182969) -74 NM_001270381 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr9-103 chr9 136866232 136866442 + 42.8 0.000 promoter-TSS (NM_001281297) promoter-TSS (NM_001281297) -1 NM_153200 8721 Hs.174050 NM_003792 ENSG00000107223 EDF1 CFAP280|EDF-1|MBF1 endothelial differentiation related factor 1 protein-coding chr11-180 chr11 106077387 106077597 + 42.8 0.000 promoter-TSS (NM_015423) promoter-TSS (NM_015423) -145 NM_198439 143879 Hs.101949 NM_152433 ENSG00000182359 KBTBD3 BKLHD3 kelch repeat and BTB domain containing 3 protein-coding chr15-68 chr15 55196945 55197155 + 42.8 0.000 promoter-TSS (NM_016304) promoter-TSS (NM_016304) -109 NM_016304 51187 Hs.274772 NM_016304 ENSG00000137876 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding chr1-271 chr1 40040524 40040734 + 42.8 0.000 promoter-TSS (NM_001350482) promoter-TSS (NM_001350482) 46 NM_006367 10487 Hs.370581 NM_006367 ENSG00000131236 CAP1 CAP|CAP1-PEN cyclase associated actin cytoskeleton regulatory protein 1 protein-coding chr10-116 chr10 102152079 102152289 + 42.8 0.000 promoter-TSS (NM_001284389) promoter-TSS (NM_001284389) 8 NM_001284388 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding chr2-119 chr2 99336341 99336551 + 42.8 0.000 promoter-TSS (NM_015904) promoter-TSS (NM_015904) -113 NM_005783 10190 Hs.536122 NM_005783 ENSG00000115514 TXNDC9 APACD|PHLP3 thioredoxin domain containing 9 protein-coding chr13-36 chr13 100088901 100089111 + 42.8 0.000 promoter-TSS (NM_001352607) promoter-TSS (NM_001352607) -9 NM_001127692 5095 Hs.80741 NM_000282 ENSG00000175198 PCCA - propionyl-CoA carboxylase subunit alpha protein-coding chr8-69 chr8 124474736 124474946 + 42.8 0.000 promoter-TSS (NM_007218) promoter-TSS (NM_007218) 74 NM_007218 11236 Hs.744151 NM_007218 ENSG00000170881 RNF139 HRCA1|RCA1|TRC8 ring finger protein 139 protein-coding chr5-100 chr5 140647607 140647817 + 42.8 0.000 promoter-TSS (NM_006083) promoter-TSS (NM_006083) 73 NM_001185012 4695 Hs.75914 NM_002488 ENSG00000131495 NDUFA2 B8|CD14|CIB8|MC1DN13 NADH:ubiquinone oxidoreductase subunit A2 protein-coding chr7-108 chr7 106285223 106285433 + 42.7 0.000 promoter-TSS (NM_005746) promoter-TSS (NM_005746) -345 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr19-161 chr19 45902607 45902817 + 42.7 0.000 promoter-TSS (NM_001012643) promoter-TSS (NM_001012643) -99 NM_001012643 339344 Hs.515478 NM_001012643 ENSG00000176182 MYPOP P42pop Myb related transcription factor, partner of profilin protein-coding chr15-62 chr15 41944424 41944634 + 42.7 0.000 intron (NM_139265, intron 2 of 5) intron (NM_139265, intron 2 of 5) 23112 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr1-526 chr1 147167445 147167655 + 42.7 0.000 intron (NR_103870, intron 2 of 5) intron (NR_103870, intron 2 of 5) 4920 NM_005399 5565 Hs.50732 NM_005399 ENSG00000131791 PRKAB2 - protein kinase AMP-activated non-catalytic subunit beta 2 protein-coding chr20-38 chr20 33720216 33720426 + 42.7 0.000 promoter-TSS (NM_007238) promoter-TSS (NM_007238) -11 NM_007238 11264 Hs.654857 NM_007238 ENSG00000101417 PXMP4 PMP24 peroxisomal membrane protein 4 protein-coding chr5-157 chr5 146447043 146447253 + 42.7 0.000 promoter-TSS (NM_001040006) promoter-TSS (NM_001040006) -185 NM_006706 10915 Hs.443465 NM_006706 ENSG00000113649 TCERG1 CA150|TAF2S|Urn1 transcription elongation regulator 1 protein-coding chr19-290 chr19 58451579 58451789 + 42.7 0.000 promoter-TSS (NM_207395) promoter-TSS (NM_207395) 62 NM_207395 388569 Hs.186970 NM_207395 ENSG00000249471 ZNF324B - zinc finger protein 324B protein-coding chr2-225 chr2 64807446 64807656 + 42.7 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 56080 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr5-76 chr5 163460396 163460606 + 42.7 0.000 promoter-TSS (NR_138426) promoter-TSS (NR_138426) -131 NM_001142557 3161 Hs.740467 NM_012484 ENSG00000072571 HMMR CD168|IHABP|RHAMM hyaluronan mediated motility receptor protein-coding chr19-267 chr19 10333407 10333617 + 42.7 0.000 promoter-TSS (NM_133452) promoter-TSS (NM_133452) 17 NM_001366174 125950 Hs.744952 NM_133452 ENSG00000161847 RAVER1 - ribonucleoprotein, PTB binding 1 protein-coding chr1-315 chr1 28088503 28088713 + 42.7 0.000 promoter-TSS (NR_104214) promoter-TSS (NR_104214) 2 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr1-143 chr1 155323209 155323419 + 42.7 0.000 promoter-TSS (NM_014328) promoter-TSS (NM_014328) 531 NR_145425 284618 Hs.650801 NM_173639 ENSG00000225855 RUSC1-AS1 C1orf104 RUSC1 antisense RNA 1 ncRNA chr2-99 chr2 240921361 240921571 + 42.5 0.000 intron (NM_001351305, intron 3 of 31) intron (NM_001351305, intron 3 of 31) 15130 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr3-115 chr3 189563999 189564209 + 42.5 0.000 Intergenic Intergenic -32642 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr8-37 chr8 140099082 140099292 + 42.5 0.000 non-coding (NR_144431, exon 1 of 1) non-coding (NR_144431, exon 1 of 1) 1348 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr17-174 chr17 28812444 28812654 + 42.5 0.000 promoter-TSS (NM_001288634) promoter-TSS (NM_001288634) -78 NM_001288634 55731 Hs.564533 NM_018182 ENSG00000173065 FAM222B C17orf63 family with sequence similarity 222 member B protein-coding chr10-143 chr10 126244231 126244441 + 42.5 0.000 intron (NM_001288974, intron 3 of 18) intron (NM_001288974, intron 3 of 18) 144141 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr2-199 chr2 223957218 223957428 + 42.5 0.000 promoter-TSS (NM_022915) promoter-TSS (NM_022915) -140 NM_022915 65080 Hs.203559 NM_022915 ENSG00000135900 MRPL44 COXPD16|L44MT|MRP-L44 mitochondrial ribosomal protein L44 protein-coding chr5-183 chr5 75336336 75336546 + 42.5 0.000 promoter-TSS (NM_000859) promoter-TSS (NM_000859) -727 NM_001364187 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding chr5-189 chr5 95555114 95555324 + 42.5 0.000 promoter-TSS (NM_014639) promoter-TSS (NM_014639) 118 NM_198150 153642 Hs.585051 NM_198150 ENSG00000164291 ARSK TSULF arylsulfatase family member K protein-coding chr9-188 chr9 127388354 127388564 + 42.5 0.000 intron (NM_001286779, intron 26 of 28) intron (NM_001286779, intron 26 of 28) -8679 NM_001271711 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr3-230 chr3 14452989 14453199 + 42.5 0.000 intron (NR_103507, intron 5 of 13) intron (NR_103507, intron 5 of 13) 50488 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr11-141 chr11 67119154 67119364 + 42.4 0.000 promoter-TSS (NM_012308) promoter-TSS (NM_012308) -4 NM_012308 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr16-238 chr16 84881695 84881905 + 42.4 0.000 intron (NM_031476, intron 13 of 14) intron (NM_031476, intron 13 of 14) 61815 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr14-81 chr14 67600108 67600318 + 42.4 0.000 promoter-TSS (NM_001363694) promoter-TSS (NM_001363694) 55 NM_004569 5283 Hs.553497 NM_004569 ENSG00000100564 PIGH GPI-H phosphatidylinositol glycan anchor biosynthesis class H protein-coding chr7-222 chr7 44163631 44163841 + 42.4 0.000 intron (NM_001354800, intron 1 of 10) L1ME1|LINE|L1 -4454 NM_033508 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr4-82 chr4 127632854 127633064 + 42.4 0.000 promoter-TSS (NM_015693) promoter-TSS (NM_015693) 2 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr10-58 chr10 789377 789587 + 42.4 0.000 Intergenic Intergenic -99814 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr22-61 chr22 36529260 36529470 + 42.4 0.000 promoter-TSS (NM_003753) promoter-TSS (NM_003753) -199 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr2-93 chr2 3558340 3558550 + 42.4 0.000 promoter-TSS (NM_001286834) promoter-TSS (NM_001286834) 58 NR_038431 100506054 Hs.606550 NR_038429 ENSG00000234171 RNASEH1-AS1 - RNASEH1 antisense RNA 1 ncRNA chr7-288 chr7 47557832 47558042 + 42.4 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 24174 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr19-355 chr19 5173284 5173494 + 42.4 0.000 Intergenic Charlie25|DNA|hAT-Charlie 167423 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr12-75 chr12 53626038 53626248 + 42.4 0.000 promoter-TSS (NM_001366558) promoter-TSS (NM_001366558) -147 NM_001206683 11016 Hs.12286 NM_006856 ENSG00000170653 ATF7 ATFA activating transcription factor 7 protein-coding chr11-220 chr11 65586785 65586995 + 42.4 0.000 intron (NM_001099409, intron 12 of 18) intron (NM_001099409, intron 12 of 18) 9106 NM_033455 10089 Hs.175218 NM_005714 ENSG00000173338 KCNK7 K2p7.1|TWIK3 potassium two pore domain channel subfamily K member 7 protein-coding chr10-110 chr10 60778268 60778478 + 42.4 0.000 promoter-TSS (NM_001170406) promoter-TSS (NM_001170406) 42 NM_001320918 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr22-147 chr22 45805033 45805243 + 42.4 0.000 intron (NM_013236, intron 9 of 11) L1MB7|LINE|L1 44614 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr9-226 chr9 69157802 69158012 + 42.4 0.000 intron (NM_001369870, intron 2 of 23) intron (NM_001369870, intron 2 of 23) -16148 NM_201629 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr14-131 chr14 100376274 100376484 + 42.4 0.000 promoter-TSS (NM_001350947) promoter-TSS (NM_001350947) -37 NM_001350950 79446 Hs.497599 NM_024515 ENSG00000176473 WDR25 C14orf67 WD repeat domain 25 protein-coding chr6-77 chr6 37819446 37819656 + 42.4 0.000 promoter-TSS (NM_021943) promoter-TSS (NM_021943) -176 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr5-109 chr5 78294825 78295035 + 42.4 0.000 promoter-TSS (NM_001271769) promoter-TSS (NM_001271769) -175 NM_003664 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding chr12-104 chr12 15882113 15882323 + 42.3 0.000 promoter-TSS (NM_007178) promoter-TSS (NM_007178) -169 NM_007178 11171 Hs.743971 NM_007178 ENSG00000023734 STRAP MAWD|PT-WD|UNRIP serine/threonine kinase receptor associated protein protein-coding chr16-166 chr16 86772787 86772997 + 42.3 0.000 Intergenic Intergenic 50801 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr3-292 chr3 140629818 140630028 + 42.3 0.000 Intergenic ERVL-E-int|LTR|ERVL -48141 NM_152616 287015 Hs.343487 NM_152616 ENSG00000155890 TRIM42 PPP1R40|T4A1 tripartite motif containing 42 protein-coding chr16-270 chr16 84851265 84851475 + 42.3 0.000 intron (NM_031476, intron 5 of 14) intron (NM_031476, intron 5 of 14) 31385 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr16-80 chr16 77722396 77722606 + 42.3 0.000 promoter-TSS (NM_001105663) promoter-TSS (NM_001105663) 9 NM_001243660 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr21-12 chr21 42893124 42893334 + 42.3 0.000 promoter-TSS (NM_021075) promoter-TSS (NM_021075) -80 NM_021075 4731 Hs.473937 NM_021075 ENSG00000160194 NDUFV3 CI-10k|CI-9KD NADH:ubiquinone oxidoreductase subunit V3 protein-coding chr17-148 chr17 14309389 14309599 + 42.3 0.000 intron (NR_130138, intron 1 of 2) CpG 5754 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr13-32 chr13 72781939 72782149 + 42.3 0.000 promoter-TSS (NM_001349655) promoter-TSS (NM_001349655) -89 NR_146205 10464 Hs.441926 NM_006346 ENSG00000083535 PIBF1 C13orf24|CEP90|JBTS33|PIBF progesterone immunomodulatory binding factor 1 protein-coding chr9-177 chr9 128094396 128094606 + 42.3 0.000 intron (NM_001006642, intron 1 of 9) intron (NM_001006642, intron 1 of 9) 3037 NM_001265614 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr17-190 chr17 80389679 80389889 + 42.3 0.000 intron (NM_001256071, intron 65 of 67) intron (NM_001256071, intron 65 of 67) -25383 NM_001164637 284131 Hs.389678 NM_173627 ENSG00000173818 ENDOV - endonuclease V protein-coding chr7-90 chr7 65872974 65873184 + 42.3 0.000 promoter-TSS (NM_173517) promoter-TSS (NM_173517) 5 NM_001284342 154807 Hs.427232 NM_173517 ENSG00000196715 VKORC1L1 - vitamin K epoxide reductase complex subunit 1 like 1 protein-coding chr2-82 chr2 232550561 232550771 + 42.3 0.000 promoter-TSS (NM_004846) promoter-TSS (NM_004846) -23 NM_004846 9470 Hs.292026 NM_004846 ENSG00000135930 EIF4E2 4E-LP|4EHP|EIF4EL3|IF4e|h4EHP eukaryotic translation initiation factor 4E family member 2 protein-coding chr19-243 chr19 47515195 47515405 + 42.3 0.000 promoter-TSS (NR_038456) promoter-TSS (NR_038456) -237 NM_003827 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chr7-311 chr7 32204432 32204642 + 42.2 0.000 intron (NM_001322059, intron 2 of 17) intron (NM_001322059, intron 2 of 17) 94791 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr6-145 chr6 156953640 156953850 + 42.2 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -82682 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr3-135 chr3 142448056 142448266 + 42.2 0.000 promoter-TSS (NM_001282859) promoter-TSS (NM_001282859) -99 NM_001282859 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr17-192 chr17 75250296 75250506 + 42.2 0.000 intron (NM_001291641, intron 1 of 17) intron (NM_001291641, intron 1 of 17) 11205 NM_014001 23163 Hs.87726 NM_014001 ENSG00000125447 GGA3 - golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding chr9-98 chr9 100099110 100099320 + 42.2 0.000 promoter-TSS (NM_015051) promoter-TSS (NM_015051) -28 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding chr16-211 chr16 29595458 29595668 + 42.2 0.000 promoter-TSS (NR_135305) promoter-TSS (NR_135305) -471 NR_135305 440354 Hs.552700 NR_002473 SMG1P2 - SMG1 pseudogene 2 pseudo chr5-110 chr5 98773361 98773571 + 42.2 0.000 promoter-TSS (NM_001366508) promoter-TSS (NM_001366508) -197 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr8-177 chr8 81686130 81686340 + 42.2 0.000 promoter-TSS (NM_005536) promoter-TSS (NM_005536) 90 NM_005536 3612 Hs.656694 NM_005536 ENSG00000133731 IMPA1 IMP|IMPA|MRT59 inositol monophosphatase 1 protein-coding chr7-171 chr7 73894951 73895161 + 42.2 0.000 Intergenic Intergenic 33897 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr1-197 chr1 17618297 17618507 + 42.2 0.000 promoter-TSS (NM_001328124) promoter-TSS (NM_001328124) 89 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr11-239 chr11 108497709 108497919 + 42.2 0.000 intron (NM_001363502, intron 1 of 5) CpG 570 NM_001363503 143888 Hs.83286 NM_153705 ENSG00000178202 POGLUT3 KDELC2 protein O-glucosyltransferase 3 protein-coding chr11-118 chr11 67583611 67583821 + 42.2 0.000 5' UTR (NM_000852, exon 1 of 7) 5' UTR (NM_000852, exon 1 of 7) 121 NM_000852 2950 Hs.523836 NM_000852 ENSG00000084207 GSTP1 DFN7|FAEES3|GST3|GSTP|HEL-S-22|PI glutathione S-transferase pi 1 protein-coding chr10-120 chr10 119658367 119658577 + 42.2 0.000 intron (NM_004281, intron 1 of 3) intron (NM_004281, intron 1 of 3) 7102 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr3-110 chr3 136752535 136752745 + 42.2 0.000 promoter-TSS (NM_005862) promoter-TSS (NM_005862) -262 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr1-193 chr1 39955066 39955276 + 42.2 0.000 promoter-TSS (NM_001136493) promoter-TSS (NM_001136493) 26 NM_001349821 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding chr17-189 chr17 15699473 15699683 + 42.2 0.000 promoter-TSS (NM_001130842) promoter-TSS (NM_001130842) -174 NM_001288647 57335 Hs.585799 NM_020652 ENSG00000187607 ZNF286A ZNF286 zinc finger protein 286A protein-coding chr19-233 chr19 45485401 45485611 + 42.2 0.000 3' UTR (NM_206900, exon 10 of 10) 3' UTR (NM_206900, exon 10 of 10) 7747 NM_206901 6253 Hs.47517 NM_005619 ENSG00000125744 RTN2 NSP2|NSPL1|NSPLI|SPG12 reticulon 2 protein-coding chr14-57 chr14 99537590 99537800 + 42.1 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 56286 NM_001099402 8812 Hs.510409 NM_003858 ENSG00000090061 CCNK CPR4|IDDHDF cyclin K protein-coding chr7-170 chr7 55478058 55478268 + 42.1 0.000 intron (NM_001321242, intron 4 of 4) intron (NM_001321242, intron 4 of 4) 48717 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr15-105 chr15 57784112 57784322 + 42.1 0.000 Intergenic Intergenic 77503 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr6-105 chr6 52352458 52352668 + 42.1 0.000 Intergenic Intergenic -9588 NM_133367 85315 Hs.239388 NM_133367 ENSG00000170915 PAQR8 C6orf33|LMPB1|MPRB progestin and adipoQ receptor family member 8 protein-coding chr22-98 chr22 35299995 35300205 + 42.1 0.000 intron (NR_156428, intron 1 of 13) CpG 206 NM_005488 10043 Hs.474705 NM_005488 ENSG00000100284 TOM1 - target of myb1 membrane trafficking protein protein-coding chr10-192 chr10 13161313 13161523 + 42.1 0.000 promoter-TSS (NM_182751) promoter-TSS (NM_182751) -140 NM_018518 55388 Hs.198363 NM_018518 ENSG00000065328 MCM10 CNA43|DNA43|PRO2249 minichromosome maintenance 10 replication initiation factor protein-coding chr10-50 chr10 12043144 12043354 + 42.1 0.000 promoter-TSS (NM_015542) promoter-TSS (NM_015542) -79 NM_080599 26019 Hs.370689 NM_015542 ENSG00000151461 UPF2 HUPF2|RENT2|smg-3 UPF2 regulator of nonsense mediated mRNA decay protein-coding chr13-109 chr13 90416489 90416699 + 42.1 0.000 Intergenic Intergenic -76694 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr19-329 chr19 20039292 20039502 + 42.1 0.000 promoter-TSS (NM_001077349) promoter-TSS (NM_001077349) 108 NM_033196 91120 Hs.306298 NM_033196 ENSG00000197124 ZNF682 BC39498_3 zinc finger protein 682 protein-coding chr15-76 chr15 43123066 43123276 + 42.1 0.000 Intergenic Intergenic -9944 NM_001347024 80021 Hs.511175 NM_024956 ENSG00000137842 TMEM62 - transmembrane protein 62 protein-coding chr10-103 chr10 31760230 31760440 + 42.1 0.000 Intergenic CpG 148591 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr9-113 chr9 133133823 133134033 + 42.1 0.000 intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) -2771 NM_001271774 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr17-182 chr17 77830456 77830666 + 42.1 0.000 Intergenic Intergenic 53526 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr6-116 chr6 26382942 26383152 + 42.1 0.000 promoter-TSS (NM_001197239) promoter-TSS (NM_001197239) -61 NM_001197239 10385 Hs.373938 NM_006995 ENSG00000124508 BTN2A2 BT2.2|BTF2|BTN2.2 butyrophilin subfamily 2 member A2 protein-coding chr17-146 chr17 927739 927949 + 42.1 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 18212 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr14-75 chr14 72894134 72894344 + 42.1 0.000 promoter-TSS (NM_012074) promoter-TSS (NM_012074) -123 NM_001280543 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr7-123 chr7 158818586 158818796 + 42.1 0.000 intron (NM_020728, intron 1 of 21) intron (NM_020728, intron 1 of 21) 10818 NM_001367773 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr8-99 chr8 110836104 110836314 + 42.1 0.000 Intergenic L1M3d|LINE|L1 191224 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr5-104 chr5 10627833 10628043 + 42.1 0.000 intron (NM_001164440, intron 2 of 3) intron (NM_001164440, intron 2 of 3) 63868 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr16-106 chr16 2460033 2460243 + 41.9 0.000 promoter-TSS (NM_025108) promoter-TSS (NM_025108) 29 NM_025108 80178 Hs.534491 NM_025108 ENSG00000162062 TEDC2 C16orf59 tubulin epsilon and delta complex 2 protein-coding chr10-250 chr10 101013138 101013348 + 41.9 0.000 intron (NM_001195263, intron 11 of 16) intron (NM_001195263, intron 11 of 16) 10746 NM_001318101 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr16-134 chr16 70251875 70252085 + 41.9 0.000 promoter-TSS (NM_058219) promoter-TSS (NM_058219) -40 NM_058219 118460 Hs.660633 NM_058219 ENSG00000223496 EXOSC6 EAP4|MTR3|Mtr3p|hMtr3p|p11 exosome component 6 protein-coding chr12-202 chr12 124236802 124237012 + 41.9 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -52257 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr7-138 chr7 151028200 151028410 + 41.9 0.000 promoter-TSS (NM_007188) promoter-TSS (NM_007188) -117 NM_001282293 11194 Hs.647118 NM_007188 ENSG00000197150 ABCB8 EST328128|M-ABC1|MABC1 ATP binding cassette subfamily B member 8 protein-coding chr4-185 chr4 151169292 151169502 + 41.9 0.000 intron (NM_001009555, intron 7 of 20) intron (NM_001009555, intron 7 of 20) 6155 NM_001128924 152503 Hs.744983 NM_001009555 ENSG00000109686 SH3D19 EBP|EVE1|Eve-1|Kryn|SH3P19 SH3 domain containing 19 protein-coding chr20-67 chr20 50510121 50510331 + 41.9 0.000 promoter-TSS (NM_001278618) promoter-TSS (NM_001278618) -95 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr9-85 chr9 128504623 128504833 + 41.9 0.000 promoter-TSS (NM_001003722) promoter-TSS (NM_001003722) 36 NM_001499 2733 Hs.522418 NM_001499 ENSG00000119392 GLE1 CAAHC|CAAHD|GLE1L|LCCS|LCCS1|hGLE1 GLE1 RNA export mediator protein-coding chr19-263 chr19 24087015 24087225 + 41.9 0.000 promoter-TSS (NM_001278664) promoter-TSS (NM_001278664) -40 NM_001278678 9534 Hs.434406 NM_004876 ENSG00000213096 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding chr1-227 chr1 151347310 151347520 + 41.9 0.000 promoter-TSS (NM_000449) promoter-TSS (NM_000449) -122 NM_000449 5993 Hs.632472 NM_000449 ENSG00000143390 RFX5 - regulatory factor X5 protein-coding chr15-67 chr15 67105453 67105663 + 41.9 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -20158 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr10-375 chr10 31064550 31064760 + 41.9 0.000 Intergenic Intergenic -32718 NM_001143768 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr9-198 chr9 136902418 136902628 + 41.9 0.000 intron (NM_021138, intron 4 of 10) intron (NM_021138, intron 4 of 10) 15790 NR_039697 100616480 NR_039697 ENSG00000266507 MIR4479 - microRNA 4479 ncRNA chr4-159 chr4 83855166 83855376 + 41.9 0.000 Intergenic MER117|DNA|hAT-Charlie 319163 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr7-189 chr7 4974018 4974228 + 41.9 0.000 non-coding (NR_015449, exon 1 of 6) non-coding (NR_015449, exon 1 of 6) 138 NR_023385 441191 Hs.520636 NR_015449 ENSG00000196204 RNF216P1 RNF216L|hCG2040556 ring finger protein 216 pseudogene 1 pseudo chr9-83 chr9 127838536 127838746 + 41.9 0.000 intron (NM_001114753, intron 2 of 14) intron (NM_001114753, intron 2 of 14) 8526 NM_001278138 2022 Hs.76753 NM_000118 ENSG00000106991 ENG END|HHT1|ORW1 endoglin protein-coding chr7-176 chr7 1142432 1142642 + 41.8 0.000 Intergenic Intergenic -4280 NM_001350968 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr22-120 chr22 38656405 38656615 + 41.8 0.000 promoter-TSS (NM_015373) promoter-TSS (NM_015373) -118 NM_001291030 646851 Hs.542707 NM_001013647 ENSG00000184949 FAM227A - family with sequence similarity 227 member A protein-coding chr9-81 chr9 134443500 134443710 + 41.8 0.000 Intergenic Intergenic 37045 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr9-298 chr9 129838796 129839006 + 41.8 0.000 intron (NM_001008563, intron 1 of 25) intron (NM_001008563, intron 1 of 25) 3443 NM_001110303 10868 Hs.5452 NM_006676 ENSG00000136878 USP20 LSFR3A|VDU2|hVDU2 ubiquitin specific peptidase 20 protein-coding chr1-237 chr1 155308586 155308796 + 41.8 0.000 promoter-TSS (NM_002004) promoter-TSS (NM_002004) -57 NM_001242825 2224 Hs.335918 NM_002004 ENSG00000160752 FDPS FPPS|FPS|POROK9 farnesyl diphosphate synthase protein-coding chr12-106 chr12 124380045 124380255 + 41.8 0.000 intron (NM_001077261, intron 19 of 47) intron (NM_001077261, intron 19 of 47) -42908 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr2-126 chr2 217858653 217858863 + 41.8 0.000 intron (NM_001308023, intron 15 of 29) intron (NM_001308023, intron 15 of 29) -25025 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr7-124 chr7 876576 876786 + 41.8 0.000 exon (NM_015949, exon 1 of 9) exon (NM_015949, exon 1 of 9) 127 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 guided entry of tail-anchored proteins factor 4 protein-coding chr11-230 chr11 65471464 65471674 + 41.8 0.000 Intergenic Intergenic 16283 NR_160549 101927789 NR_160547 LOC101927789 - FAU, ubiquitin like and ribosomal protein S30 fusion pseudogene pseudo chrX-25 chrX 150767536 150767746 + 41.8 0.000 3' UTR (NM_031462, exon 11 of 11) 3' UTR (NM_031462, exon 11 of 11) 55886 NM_001353996 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr3-182 chr3 124504627 124504837 + 41.8 0.000 intron (NM_001024660, intron 33 of 59) intron (NM_001024660, intron 33 of 59) -79926 NM_001322995 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr16-103 chr16 27549983 27550193 + 41.8 0.000 promoter-TSS (NM_001286242) promoter-TSS (NM_001286242) -56 NM_015202 23247 Hs.460459 NM_015202 ENSG00000047578 KIAA0556 JBTS26 KIAA0556 protein-coding chr10-179 chr10 132575520 132575730 + 41.8 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 37838 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr1-217 chr1 26276358 26276568 + 41.7 0.000 intron (NM_022778, intron 12 of 13) intron (NM_022778, intron 12 of 13) -3623 NM_031286 83442 Hs.109051 NM_031286 ENSG00000142669 SH3BGRL3 HEL-S-297|SH3BP-1|TIP-B1 SH3 domain binding glutamate rich protein like 3 protein-coding chr1-414 chr1 145885932 145886142 + 41.7 0.000 promoter-TSS (NM_001280799) promoter-TSS (NM_001280799) -171 NM_144698 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 - ankyrin repeat domain 35 protein-coding chr9-120 chr9 131125331 131125541 + 41.7 0.000 promoter-TSS (NM_005085) promoter-TSS (NM_005085) -150 NM_001318324 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr6-235 chr6 17012492 17012702 + 41.7 0.000 Intergenic L2b|LINE|L2 -89661 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr9-55 chr9 135907689 135907899 + 41.7 0.000 promoter-TSS (NM_015447) promoter-TSS (NM_015447) -248 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr7-154 chr7 66995534 66995744 + 41.7 0.000 promoter-TSS (NM_016038) promoter-TSS (NM_016038) -53 NM_016038 51119 Hs.110445 NM_016038 ENSG00000126524 SBDS CGI-97|SDS|SWDS SBDS ribosome maturation factor protein-coding chr22-106 chr22 41217727 41217937 + 41.7 0.000 promoter-TSS (NR_148200) promoter-TSS (NR_148200) -205 NR_148200 100506544 Hs.627409 NR_148200 ENSG00000235513 LOC100506544 - uncharacterized LOC100506544 ncRNA chr9-233 chr9 124054746 124054956 + 41.7 0.000 Intergenic Intergenic 43083 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr3-133 chr3 184561520 184561730 + 41.7 0.000 promoter-TSS (NM_004443) promoter-TSS (NM_004443) -160 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr15-17 chr15 25438984 25439194 + 41.7 0.000 promoter-TSS (NM_001354509) promoter-TSS (NM_001354509) -33 NM_000462 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr14-92 chr14 90383235 90383445 + 41.7 0.000 Intergenic CpG -13162 NM_001363669 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAM2|CAM3|CAMB|CAMC|CAMI|CAMIII|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr17-218 chr17 40287592 40287802 + 41.7 0.000 promoter-TSS (NM_001254) promoter-TSS (NM_001254) -182 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding chr2-213 chr2 85259299 85259509 + 41.7 0.000 intron (NM_031283, intron 3 of 11) UCON105|Unknown|Unknown 45752 NR_136323 102724579 Hs.669216 NR_136323 LOC102724579 - uncharacterized LOC102724579 ncRNA chr10-232 chr10 103739488 103739698 + 41.7 0.000 intron (NM_014631, intron 3 of 13) intron (NM_014631, intron 3 of 13) -7186 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr3-88 chr3 100492267 100492477 + 41.7 0.000 promoter-TSS (NM_018004) promoter-TSS (NM_018004) -247 NM_001363876 55076 Hs.658956 NM_018004 ENSG00000181458 TMEM45A DERP7|DNAPTP4 transmembrane protein 45A protein-coding chr2-98 chr2 128090994 128091204 + 41.7 0.000 promoter-TSS (NM_020120) promoter-TSS (NM_020120) -101 NM_020120 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr8-50 chr8 65644449 65644659 + 41.7 0.000 promoter-TSS (NM_014637) promoter-TSS (NM_014637) -99 NM_001145839 9650 Hs.584788 NM_014637 ENSG00000066855 MTFR1 CHPPR|FAM54A2 mitochondrial fission regulator 1 protein-coding chr11-263 chr11 117239361 117239571 + 41.6 0.000 intron (NM_001077239, intron 3 of 14) intron (NM_001077239, intron 3 of 14) 6730 NM_001278249 257160 Hs.591934 NM_207343 ENSG00000167257 RNF214 - ring finger protein 214 protein-coding chr1-481 chr1 52005668 52005878 + 41.6 0.000 Intergenic LTR61|LTR|ERV1 -15073 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr16-260 chr16 64864358 64864568 + 41.6 0.000 Intergenic Intergenic 257600 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr2-180 chr2 231642781 231642991 + 41.6 0.000 Intergenic Intergenic 50022 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr14-124 chr14 68544249 68544459 + 41.6 0.000 intron (NM_001321818, intron 10 of 10) AmnSINE1|SINE|5S-Deu-L2 84433 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr16-223 chr16 2682437 2682647 + 41.6 0.000 promoter-TSS (NM_018992) promoter-TSS (NM_018992) 19 NM_018992 54442 Hs.61960 NM_018992 ENSG00000167977 KCTD5 - potassium channel tetramerization domain containing 5 protein-coding chr8-133 chr8 144509628 144509838 + 41.6 0.000 exon (NM_138431, exon 1 of 5) exon (NM_138431, exon 1 of 5) 663 NM_138431 113655 Hs.7678 NM_138431 ENSG00000167700 MFSD3 - major facilitator superfamily domain containing 3 protein-coding chr17-227 chr17 16477344 16477554 + 41.6 0.000 intron (NM_207387, intron 1 of 2) intron (NM_207387, intron 1 of 2) 14744 NM_001113567 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr5-273 chr5 140310923 140311133 + 41.6 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -7927 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chrX-19 chrX 47362148 47362358 + 41.6 0.000 Intergenic Intergenic -8347 NM_003446 7712 Hs.89897 NM_003446 ENSG00000147117 ZNF157 HZF22 zinc finger protein 157 protein-coding chr9-180 chr9 35114160 35114370 + 41.6 0.000 intron (NM_025182, intron 1 of 8) intron (NM_025182, intron 1 of 8) 1597 NR_134455 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr17-72 chr17 8435795 8436005 + 41.6 0.000 promoter-TSS (NM_001025579) promoter-TSS (NM_001025579) 16 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr10-81 chr10 130110639 130110849 + 41.6 0.000 promoter-TSS (NR_034125) promoter-TSS (NR_034125) 73 NR_034125 387723 Hs.127394 NM_001355042 ENSG00000237489 C10orf143 LINC00959 chromosome 10 open reading frame 143 protein-coding chr22-138 chr22 38057142 38057352 + 41.6 0.000 promoter-TSS (NM_012407) promoter-TSS (NM_012407) -8 NM_001039583 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr10-139 chr10 103660126 103660336 + 41.6 0.000 intron (NM_001365079, intron 2 of 8) intron (NM_001365079, intron 2 of 8) 17984 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr9-295 chr9 124415408 124415618 + 41.6 0.000 promoter-TSS (NM_002799) promoter-TSS (NM_002799) -71 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr12-171 chr12 1355470 1355680 + 41.6 0.000 intron (NR_027948, intron 15 of 19) intron (NR_027948, intron 15 of 19) -144916 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr16-130 chr16 85050625 85050835 + 41.6 0.000 intron (NM_001286566, intron 1 of 11) intron (NM_001286566, intron 1 of 11) -12482 NM_001286565 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chr6-80 chr6 127366352 127366562 + 41.6 0.000 Intergenic Intergenic -22848 NM_001105545 55862 Hs.486410 NM_018479 ENSG00000093144 ECHDC1 HEL-S-76|MMCD|dJ351K20.2 ethylmalonyl-CoA decarboxylase 1 protein-coding chr13-64 chr13 45206366 45206576 + 41.6 0.000 intron (NM_004128, intron 4 of 7) intron (NM_004128, intron 4 of 7) -5426 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr10-142 chr10 125231490 125231700 + 41.5 0.000 Intergenic Intergenic -70565 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr17-223 chr17 3668622 3668832 + 41.5 0.000 promoter-TSS (NM_014604) promoter-TSS (NM_014604) 4 NM_001014764 83460 Hs.30011 NM_031298 ENSG00000127774 EMC6 RAB5IFL|TMEM93 ER membrane protein complex subunit 6 protein-coding chr15-54 chr15 64835787 64835997 + 41.5 0.000 Intergenic CpG -5991 NM_001195059 80301 Hs.709337 NM_025201 ENSG00000241839 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing O2 protein-coding chr2-127 chr2 55617689 55617899 + 41.5 0.000 promoter-TSS (NM_001282850) promoter-TSS (NM_001282850) -172 NM_020463 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding chr2-108 chr2 69437436 69437646 + 41.5 0.000 promoter-TSS (NM_015700) promoter-TSS (NM_015700) 87 NM_001002756 27247 Hs.430439 NM_015700 ENSG00000169599 NFU1 CGI-33|HIRIP|HIRIP5|MMDS1|NIFUC|Nfu|NifU NFU1 iron-sulfur cluster scaffold protein-coding chr1-260 chr1 2135477 2135687 + 41.5 0.000 intron (NR_146911, intron 2 of 15) intron (NR_146911, intron 2 of 15) 30866 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr22-118 chr22 29553638 29553848 + 41.5 0.000 promoter-TSS (NM_001002878) promoter-TSS (NM_001002878) 14 NM_003678 8563 Hs.75361 NM_003678 ENSG00000100296 THOC5 C22orf19|Fmip|PK1.3|fSAP79 THO complex 5 protein-coding chr17-160 chr17 30477302 30477512 + 41.5 0.000 promoter-TSS (NM_001007024) promoter-TSS (NM_001007024) -1 NM_004871 9527 Hs.462680 NM_004871 ENSG00000108587 GOSR1 GOLIM2|GOS-28|GOS28|GOS28/P28|GS28|P28 golgi SNAP receptor complex member 1 protein-coding chr17-286 chr17 79952048 79952258 + 41.5 0.000 intron (NM_019020, intron 4 of 11) intron (NM_019020, intron 4 of 11) -1300 NM_001271846 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr6-163 chr6 79234650 79234860 + 41.5 0.000 promoter-TSS (NM_001318887) promoter-TSS (NM_001318887) -73 NM_001201363 9324 Hs.77558 NM_004242 ENSG00000118418 HMGN3 PNAS-24|PNAS-25|TRIP7 high mobility group nucleosomal binding domain 3 protein-coding chr22-99 chr22 36239494 36239704 + 41.5 0.000 promoter-TSS (NM_030882) promoter-TSS (NM_030882) -72 NM_030882 23780 Hs.474740 NM_030882 ENSG00000128335 APOL2 APOL-II|APOL3 apolipoprotein L2 protein-coding chr9-224 chr9 2015029 2015239 + 41.4 0.000 promoter-TSS (NM_003070) promoter-TSS (NM_003070) -213 NM_001289397 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr14-138 chr14 65000948 65001158 + 41.4 0.000 intron (NM_002028, intron 1 of 11) LTR23|LTR|ERV1 14158 NM_002028 2342 Hs.325531 NM_002028 ENSG00000257365 FNTB FPTB farnesyltransferase, CAAX box, beta protein-coding chr7-143 chr7 100335840 100336050 + 41.4 0.000 promoter-TSS (NR_036569) promoter-TSS (NR_036569) -120 NR_036570 101752399 Hs.521075 NR_036569 ENSG00000272752 STAG3L5P-PVRIG2P-PILRB FDFACT|LOC101735302-LOC101752334-PILRB|PILRB STAG3L5P-PVRIG2P-PILRB readthrough ncRNA chr19-499 chr19 58408509 58408719 + 41.4 0.000 promoter-TSS (NR_134461) promoter-TSS (NR_134461) -35 NM_173548 201514 Hs.439551 NM_173548 ENSG00000171574 ZNF584 - zinc finger protein 584 protein-coding chr12-241 chr12 127588284 127588494 + 41.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 48078 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LINC02411 - long intergenic non-protein coding RNA 2411 ncRNA chr14-45 chr14 105415041 105415251 + 41.4 0.000 Intergenic CpG 4593 NR_125385 100507437 Hs.676548 NR_125384 ENSG00000251602 LOC100507437 - uncharacterized LOC100507437 ncRNA chr1-212 chr1 36150800 36151010 + 41.4 0.000 intron (NM_001270895, intron 1 of 4) intron (NM_001270895, intron 1 of 4) -1391 NR_073098 27095 Hs.523131 NM_014408 ENSG00000054116 TRAPPC3 BET3 trafficking protein particle complex 3 protein-coding chr9-91 chr9 134413821 134414031 + 41.4 0.000 intron (NM_002957, intron 4 of 9) intron (NM_002957, intron 4 of 9) 7366 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr13-52 chr13 98978014 98978224 + 41.4 0.000 promoter-TSS (NM_001366684) promoter-TSS (NM_001366684) -55 NM_001366684 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr10-242 chr10 126315793 126316003 + 41.4 0.000 intron (NM_001288974, intron 2 of 18) intron (NM_001288974, intron 2 of 18) 72579 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr12-45 chr12 49828415 49828625 + 41.4 0.000 promoter-TSS (NR_027499) promoter-TSS (NR_027499) -23 NR_027500 100286844 Hs.656019 NR_027499 ENSG00000258057 BCDIN3D-AS1 - BCDIN3D antisense RNA 1 ncRNA chr2-94 chr2 196639499 196639709 + 41.4 0.000 promoter-TSS (NM_001353339) promoter-TSS (NM_001353339) -111 NM_001353339 284992 Hs.132519 NM_173466 ENSG00000144395 CCDC150 - coiled-coil domain containing 150 protein-coding chr8-68 chr8 73008816 73009026 + 41.4 0.000 promoter-TSS (NM_003218) promoter-TSS (NM_003218) 57 NM_003218 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding chr7-93 chr7 32495352 32495562 + 41.4 0.000 promoter-TSS (NM_001130710) promoter-TSS (NM_001130710) -32 NM_015060 23080 Hs.128056 NM_015060 ENSG00000105778 AVL9 KIAA0241 AVL9 cell migration associated protein-coding chr16-241 chr16 58129379 58129589 + 41.4 0.000 promoter-TSS (NR_136632) promoter-TSS (NR_136632) -59 NR_136632 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr3-274 chr3 153161229 153161439 + 41.2 0.000 promoter-TSS (NM_002886) promoter-TSS (NM_002886) -892 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr10-141 chr10 119667822 119668032 + 41.2 0.000 intron (NM_004281, intron 1 of 3) intron (NM_004281, intron 1 of 3) 16557 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr10-75 chr10 87504721 87504931 + 41.2 0.000 promoter-TSS (NM_004897) promoter-TSS (NM_004897) -67 NM_004897 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding chr17-281 chr17 81576730 81576940 + 41.2 0.000 intron (NM_001369698, intron 12 of 16) intron (NM_001369698, intron 12 of 16) 598 NR_130139 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr17-234 chr17 77145642 77145852 + 41.2 0.000 intron (NM_001143999, intron 3 of 16) intron (NM_001143999, intron 3 of 16) 4778 NM_001143999 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr3-138 chr3 14525987 14526197 + 41.2 0.000 intron (NM_001080423, intron 1 of 23) intron (NM_001080423, intron 1 of 23) 14250 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chr19-510 chr19 51394208 51394418 + 41.1 0.000 Intergenic Intergenic -3722 NR_126530 147646 Hs.148344 NM_001193623 ENSG00000262874 C19orf84 - chromosome 19 open reading frame 84 protein-coding chr17-263 chr17 77542821 77543031 + 41.1 0.000 Intergenic Intergenic -4015 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr14-86 chr14 50231705 50231915 + 41.1 0.000 promoter-TSS (NM_006939) promoter-TSS (NM_006939) -232 NM_006939 6655 Hs.291533 NM_006939 ENSG00000100485 SOS2 NS9|SOS-2 SOS Ras/Rho guanine nucleotide exchange factor 2 protein-coding chr1-376 chr1 169485996 169486206 + 41.1 0.000 promoter-TSS (NM_001319667) promoter-TSS (NM_001319667) -131 NM_001319667 10560 Hs.30246 NM_006996 ENSG00000117479 SLC19A2 TC1|THMD1|THT1|THTR1|TRMA solute carrier family 19 member 2 protein-coding chr5-134 chr5 138213320 138213530 + 41.1 0.000 promoter-TSS (NM_004661) promoter-TSS (NM_004661) -102 NM_004661 8697 Hs.73625 NM_004661 ENSG00000094880 CDC23 ANAPC8|APC8|CUT23 cell division cycle 23 protein-coding chr2-177 chr2 36438586 36438796 + 41.1 0.000 intron (NM_016441, intron 2 of 16) intron (NM_016441, intron 2 of 16) 82913 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr4-71 chr4 17810664 17810874 + 41.1 0.000 promoter-TSS (NM_017741) promoter-TSS (NM_017741) -12 NM_017741 54876 Hs.614787 NM_017741 ENSG00000163257 DCAF16 C4orf30 DDB1 and CUL4 associated factor 16 protein-coding chr1-204 chr1 183635595 183635805 + 41.1 0.000 promoter-TSS (NM_001270439) promoter-TSS (NM_001270439) 83 NM_005717 10092 Hs.518609 NM_005717 ENSG00000162704 ARPC5 ARC16|dJ127C7.3|p16-Arc actin related protein 2/3 complex subunit 5 protein-coding chr17-337 chr17 56699585 56699795 + 41.1 0.000 Intergenic Intergenic 105991 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr10-108 chr10 124063745 124063955 + 41.1 0.000 intron (NM_001270765, intron 1 of 5) intron (NM_001270765, intron 1 of 5) 28556 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr8-114 chr8 141026892 141027102 + 41.1 0.000 Intergenic Intergenic -24918 NM_001352699 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr1-288 chr1 206003261 206003471 + 41.1 0.000 promoter-TSS (NM_001304839) promoter-TSS (NM_001304839) 29 NM_001164522 338382 Hs.534612 NM_177403 ENSG00000276600 RAB7B RAB7 RAB7B, member RAS oncogene family protein-coding chr2-184 chr2 61764256 61764466 + 41.1 0.000 Intergenic CpG 89699 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr1-194 chr1 145957934 145958144 + 41.0 0.000 promoter-TSS (NM_153713) promoter-TSS (NM_153713) -22 NM_153713 128077 Hs.740619 NM_153713 ENSG00000271601 LIX1L - limb and CNS expressed 1 like protein-coding chr12-49 chr12 118372905 118373115 + 41.0 0.000 promoter-TSS (NM_016281) promoter-TSS (NM_016281) -103 NM_001346493 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr7-31 chr7 75739081 75739291 + 41.0 0.000 promoter-TSS (NM_001243198) promoter-TSS (NM_001243198) -245 NM_001243198 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr9-157 chr9 125143507 125143717 + 41.0 0.000 promoter-TSS (NM_001144877) promoter-TSS (NM_001144877) -84 NM_173690 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr10-170 chr10 125035278 125035488 + 41.0 0.000 intron (NM_001290214, intron 3 of 10) intron (NM_001290214, intron 3 of 10) -2513 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr10-346 chr10 28280858 28281068 + 41.0 0.000 intron (NM_173496, intron 1 of 18) intron (NM_173496, intron 1 of 18) 1160 NM_173496 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr12-101 chr12 106987016 106987226 + 41.0 0.000 promoter-TSS (NM_025198) promoter-TSS (NM_025198) 25 NM_001033050 80298 Hs.5009 NM_025198 ENSG00000120832 MTERF2 MTERFD3|mTERFL mitochondrial transcription termination factor 2 protein-coding chr16-148 chr16 57186086 57186296 + 41.0 0.000 promoter-TSS (NM_001305163) promoter-TSS (NM_001305163) -75 NM_001354079 80011 Hs.396740 NM_024946 ENSG00000172775 FAM192A C16orf94|CDA018|CDA10|NIP30|PIP30 family with sequence similarity 192 member A protein-coding chr16-174 chr16 30585702 30585912 + 41.0 0.000 promoter-TSS (NM_152458) promoter-TSS (NM_152458) -110 NM_152458 146540 Hs.513509 NM_152458 ENSG00000197162 ZNF785 ZNF688 zinc finger protein 785 protein-coding chr17-63 chr17 68035432 68035642 + 41.0 0.000 promoter-TSS (NM_002266) promoter-TSS (NM_002266) -198 NM_002266 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr15-72 chr15 59689357 59689567 + 41.0 0.000 promoter-TSS (NM_001368061) promoter-TSS (NM_001368061) -142 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr8-126 chr8 130062097 130062307 + 41.0 0.000 intron (NM_001362925, intron 27 of 29) L2a|LINE|L2 22566 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr6-50 chr6 42929258 42929468 + 41.0 0.000 non-coding (NR_134886, exon 1 of 2) non-coding (NR_134886, exon 1 of 2) -117 NM_001318856 107080644 Hs.144914 NM_001318856 CNPY3-GNMT - CNPY3-GNMT readthrough protein-coding chr2-195 chr2 46315241 46315451 + 41.0 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 17939 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr9-135 chr9 19102817 19103027 + 41.0 0.000 promoter-TSS (NM_017645) promoter-TSS (NM_017645) -18 NM_017645 54801 Hs.533468 NM_017645 ENSG00000147874 HAUS6 Dgt6|FAM29A HAUS augmin like complex subunit 6 protein-coding chr8-54 chr8 37762408 37762618 + 41.0 0.000 promoter-TSS (NM_001349346) promoter-TSS (NM_001349346) -33 NM_001349349 11212 Hs.304792 NM_007198 ENSG00000147471 PLPBP EPVB6D|PROSC pyridoxal phosphate binding protein protein-coding chr2-420 chr2 237695383 237695593 + 41.0 0.000 intron (NM_001137551, intron 1 of 11) intron (NM_001137551, intron 1 of 11) 3283 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr11-265 chr11 60913904 60914114 + 41.0 0.000 promoter-TSS (NM_024092) promoter-TSS (NM_024092) -149 NM_024092 79073 Hs.13662 NM_024092 ENSG00000110108 TMEM109 - transmembrane protein 109 protein-coding chr17-179 chr17 82551904 82552114 + 41.0 0.000 intron (NM_004514, intron 1 of 8) intron (NM_004514, intron 1 of 8) 32277 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr1-162 chr1 3796447 3796657 + 41.0 0.000 promoter-TSS (NM_020710) promoter-TSS (NM_020710) -54 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 - leucine rich repeat containing 47 protein-coding chr7-209 chr7 55308353 55308563 + 41.0 0.000 Intergenic Intergenic -52823 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr19-253 chr19 39403780 39403990 + 41.0 0.000 Intergenic Intergenic -2962 NM_003407 7538 Hs.534052 NM_003407 ENSG00000128016 ZFP36 G0S24|GOS24|NUP475|RNF162A|TIS11|TTP|zfp-36 ZFP36 ring finger protein protein-coding chr2-103 chr2 42361419 42361629 + 41.0 0.000 promoter-TSS (NM_004718) promoter-TSS (NM_004718) -281 NR_134947 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr11-227 chr11 65027473 65027683 + 41.0 0.000 non-coding (NR_037650, exon 4 of 11) non-coding (NR_037650, exon 4 of 11) 139 NM_147777 29907 Hs.80132 NM_013306 ENSG00000110025 SNX15 HSAF001435 sorting nexin 15 protein-coding chr2-254 chr2 200901561 200901771 + 41.0 0.000 intron (NM_001369445, intron 6 of 6) intron (NM_001369445, intron 6 of 6) 9748 NM_001142356 60491 Hs.145284 NM_021824 ENSG00000196290 NIF3L1 ALS2CR1|CALS-7|MDS015 NGG1 interacting factor 3 like 1 protein-coding chr2-168 chr2 189441291 189441501 + 40.9 0.000 promoter-TSS (NM_032168) promoter-TSS (NM_032168) -37 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr4-69 chr4 110623126 110623336 + 40.9 0.000 promoter-TSS (NM_000325) promoter-TSS (NM_000325) -154 NM_000325 5308 Hs.643588 NM_000325 ENSG00000164093 PITX2 ARP1|ASGD4|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS paired like homeodomain 2 protein-coding chr1-126 chr1 6579837 6580047 + 40.9 0.000 promoter-TSS (NM_005341) promoter-TSS (NM_005341) -52 NM_005341 3104 Hs.502330 NM_005341 ENSG00000204859 ZBTB48 HKR3|TZAP|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding chr7-298 chr7 157310190 157310400 + 40.9 0.000 Intergenic Intergenic -26709 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr17-111 chr17 82519510 82519720 + 40.9 0.000 promoter-TSS (NM_004514) promoter-TSS (NM_004514) -117 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr6-146 chr6 16450420 16450630 + 40.9 0.000 intron (NM_000332, intron 7 of 8) MIRb|SINE|MIR 211938 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr12-178 chr12 3698392 3698602 + 40.9 0.000 intron (NM_001144958, intron 3 of 19) intron (NM_001144958, intron 3 of 19) 54612 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr10-405 chr10 82190659 82190869 + 40.9 0.000 intron (NM_001165973, intron 2 of 10) MLT1L|LTR|ERVL-MaLR 42156 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr4-27 chr4 7043062 7043272 + 40.9 0.000 promoter-TSS (NM_152293) promoter-TSS (NM_152293) -166 NM_153376 257236 Hs.656757 NM_153376 ENSG00000173013 CCDC96 - coiled-coil domain containing 96 protein-coding chr8-76 chr8 48620107 48620317 + 40.9 0.000 promoter-TSS (NR_105004) promoter-TSS (NR_105004) -191 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA chr19-387 chr19 4978001 4978211 + 40.9 0.000 intron (NM_001370094, intron 1 of 10) intron (NM_001370094, intron 1 of 10) 8993 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr20-43 chr20 24502290 24502500 + 40.9 0.000 intron (NM_001323606, intron 2 of 4) intron (NM_001323606, intron 2 of 4) 32434 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr20-28 chr20 34955790 34956000 + 40.9 0.000 promoter-TSS (NM_001322495) promoter-TSS (NM_001322495) 27 NM_020884 57644 Hs.414122 NM_020884 ENSG00000078814 MYH7B MHC14|MYH14 myosin heavy chain 7B protein-coding chr5-108 chr5 148383708 148383918 + 40.9 0.000 promoter-TSS (NM_030793) promoter-TSS (NM_030793) 37 NR_105057 102546294 Hs.660461 NR_105057 ENSG00000247199 LOC102546294 - uncharacterized LOC102546294 ncRNA chr4-128 chr4 76905644 76905854 + 40.9 0.000 Intergenic L2a|LINE|L2 -7605 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr16-138 chr16 30395183 30395393 + 40.9 0.000 promoter-TSS (NM_001324494) promoter-TSS (NM_001324494) -132 NM_001324494 197407 Hs.513501 NM_152652 ENSG00000180035 ZNF48 ZNF553 zinc finger protein 48 protein-coding chr4-161 chr4 6942408 6942618 + 40.9 0.000 intron (NM_020773, intron 2 of 13) intron (NM_020773, intron 2 of 13) -11653 NM_001330638 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr22-135 chr22 42615478 42615688 + 40.9 0.000 promoter-TSS (NM_032311) promoter-TSS (NM_032311) 338 NR_029422 267010 Hs.574857 NR_029422 ENSG00000276027 RNU12 RNU12-1|RNU12L|RNU12P|dJ222E13.7 RNA, U12 small nuclear snRNA chr5-287 chr5 120388438 120388648 + 40.9 0.000 Intergenic Intergenic -75735 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr3-83 chr3 133573355 133573565 + 40.9 0.000 promoter-TSS (NM_017548) promoter-TSS (NM_017548) -226 NM_001134422 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr16-131 chr16 9091375 9091585 + 40.8 0.000 promoter-TSS (NM_014117) promoter-TSS (NM_014117) -164 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr22-148 chr22 46595999 46596209 + 40.8 0.000 intron (NM_001366660, intron 1 of 17) intron (NM_001366660, intron 1 of 17) 19016 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr7-126 chr7 75486195 75486405 + 40.8 0.000 promoter-TSS (NR_160304) promoter-TSS (NR_160304) -1 NM_001099415 100101267 Hs.712563 NM_001099415 ENSG00000272391 POM121C POM121-2 POM121 transmembrane nucleoporin C protein-coding chr11-196 chr11 61871276 61871486 + 40.8 0.000 Intergenic Intergenic 6897 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr17-79 chr17 75941013 75941223 + 40.8 0.000 TTS (NM_007292) TTS (NM_007292) -2886 NM_001319193 85302 Hs.720068 NM_001080542 ENSG00000188878 FBF1 Alb|FBF-1 Fas binding factor 1 protein-coding chr2-194 chr2 38875683 38875893 + 40.8 0.000 promoter-TSS (NM_001145450) promoter-TSS (NM_001145450) 146 NM_198963 90957 Hs.468226 NM_198963 ENSG00000163214 DHX57 DDX57 DExH-box helicase 57 protein-coding chr12-172 chr12 22275957 22276167 + 40.8 0.000 intron (NM_003034, intron 2 of 4) intron (NM_003034, intron 2 of 4) 58652 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr10-63 chr10 73168103 73168313 + 40.8 0.000 promoter-TSS (NM_001135752) promoter-TSS (NM_001135752) 89 NM_173348 317662 Hs.408577 NM_173348 ENSG00000138286 FAM149B1 KIAA0974 family with sequence similarity 149 member B1 protein-coding chr13-33 chr13 23979523 23979733 + 40.8 0.000 promoter-TSS (NM_001286792) promoter-TSS (NM_001286792) -174 NM_001286792 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr5-130 chr5 6159127 6159337 + 40.8 0.000 Intergenic Intergenic 178060 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr1-275 chr1 16352530 16352740 + 40.8 0.000 promoter-TSS (NM_018994) promoter-TSS (NM_018994) -155 NM_018994 54455 Hs.522384 NM_018994 ENSG00000037637 FBXO42 Fbx42|JFK F-box protein 42 protein-coding chr2-162 chr2 127064740 127064950 + 40.8 0.000 intron (NM_139349, intron 6 of 14) intron (NM_139349, intron 6 of 14) 17220 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr9-214 chr9 127715752 127715962 + 40.8 0.000 promoter-TSS (NM_001317037) promoter-TSS (NM_001317037) -181 NM_001345980 138428 Hs.653265 NM_001002913 ENSG00000187024 PTRH1 C9orf115|PTH1 peptidyl-tRNA hydrolase 1 homolog protein-coding chr19-298 chr19 13787831 13788041 + 40.8 0.000 Intergenic Intergenic -7507 NM_001367834 65249 Hs.466015 NM_023072 ENSG00000132003 ZSWIM4 - zinc finger SWIM-type containing 4 protein-coding chr1-156 chr1 27366837 27367047 + 40.8 0.000 promoter-TSS (NM_004672) promoter-TSS (NM_004672) 19 NM_001297609 9064 Hs.194694 NM_004672 ENSG00000142733 MAP3K6 ASK2|MAPKKK6|MEKK6 mitogen-activated protein kinase kinase kinase 6 protein-coding chr12-148 chr12 130776641 130776851 + 40.8 0.000 Intergenic Intergenic -60441 NM_001351233 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding chr8-51 chr8 143829403 143829613 + 40.8 0.000 promoter-TSS (NM_078480) promoter-TSS (NM_078480) -193 NM_014281 22827 Hs.521924 NM_014281 ENSG00000179950 PUF60 FIR|RoBPI|SIAHBP1|VRJS poly(U) binding splicing factor 60 protein-coding chr2-146 chr2 86194933 86195143 + 40.7 0.000 intron (NM_006839, intron 1 of 14) CpG 732 NM_006839 10989 Hs.148559 NM_006839 ENSG00000132305 IMMT HMP|MICOS60|MINOS2|Mic60|P87|P87/89|P89|PIG4|PIG52 inner membrane mitochondrial protein protein-coding chr2-112 chr2 26033846 26034056 + 40.7 0.000 promoter-TSS (NM_016131) promoter-TSS (NM_016131) -133 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr11-321 chr11 67317513 67317723 + 40.7 0.000 promoter-TSS (NR_024469) promoter-TSS (NR_024469) -221 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 - uncharacterized LOC100130987 ncRNA chr2-153 chr2 202375913 202376123 + 40.7 0.000 promoter-TSS (NM_001204) promoter-TSS (NM_001204) -309 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr9-271 chr9 114552011 114552221 + 40.7 0.000 Intergenic Intergenic -35653 NM_004888 9550 Hs.388654 NM_004888 ENSG00000136888 ATP6V1G1 ATP6G|ATP6G1|ATP6GL|ATP6J|Vma10 ATPase H+ transporting V1 subunit G1 protein-coding chr8-71 chr8 143454707 143454917 + 40.7 0.000 intron (NM_015117, intron 9 of 11) Tigger7|DNA|TcMar-Tigger -24080 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr10-182 chr10 93947185 93947395 + 40.7 0.000 Intergenic Intergenic 14625 NR_002319 266971 Hs.149255 NR_002319 ENSG00000180764 PIPSL PIP5K1L1|PIP5K1P3|PSMD4P2|bA429H9.1 PIP5K1A and PSMD4 like (pseudogene) pseudo chr3-64 chr3 10321075 10321285 + 40.7 0.000 promoter-TSS (NM_183352) promoter-TSS (NM_183352) 8 NM_001278946 6396 Hs.166924 NM_030673 ENSG00000157020 SEC13 D3S1231E|SEC13L1|SEC13R|npp-20 SEC13 homolog, nuclear pore and COPII coat complex component protein-coding chr10-127 chr10 122879656 122879866 + 40.7 0.000 promoter-TSS (NR_037915) promoter-TSS (NR_037915) -120 NR_037911 196792 Hs.114648 NM_152644 ENSG00000213185 FAM24B - family with sequence similarity 24 member B protein-coding chr15-106 chr15 58731893 58732103 + 40.7 0.000 intron (NM_001320570, intron 1 of 14) intron (NM_001320570, intron 1 of 14) 17709 NM_001110 102 Hs.172028 NM_001110 ENSG00000137845 ADAM10 AD10|AD18|CD156c|CDw156|HsT18717|MADM|RAK|kuz ADAM metallopeptidase domain 10 protein-coding chr4-166 chr4 107896301 107896511 + 40.7 0.000 intron (NM_152621, intron 2 of 5) intron (NM_152621, intron 2 of 5) 3142 NM_152621 166929 Hs.595423 NM_152621 ENSG00000164023 SGMS2 SMS2 sphingomyelin synthase 2 protein-coding chr7-59 chr7 1569924 1570134 + 40.7 0.000 promoter-TSS (NM_001134340) promoter-TSS (NM_001134340) 3 NM_001134340 84262 Hs.446311 NM_032302 ENSG00000157778 PSMG3 C7orf48|PAC3 proteasome assembly chaperone 3 protein-coding chr1-339 chr1 145979417 145979627 + 40.7 0.000 TTS (NM_001330685) TTS (NM_001330685) 14832 NM_032305 84265 Hs.591456 NM_032305 ENSG00000121851 POLR3GL RPC32HOM|flj32422 RNA polymerase III subunit G like protein-coding chr10-155 chr10 97649132 97649342 + 40.7 0.000 intron (NM_018425, intron 1 of 8) intron (NM_018425, intron 1 of 8) 8551 NM_018425 55361 Hs.25300 NM_018425 ENSG00000155252 PI4K2A PI4KII|PIK42A phosphatidylinositol 4-kinase type 2 alpha protein-coding chr4-126 chr4 14856545 14856755 + 40.7 0.000 intron (NR_126435, intron 2 of 6) intron (NR_126435, intron 2 of 6) 31519 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr15-81 chr15 40507224 40507434 + 40.7 0.000 Intergenic CpG 25221 NR_002208 359821 Hs.678598 NR_002208 MRPL42P5 - mitochondrial ribosomal protein L42 pseudogene 5 pseudo chr16-175 chr16 84532391 84532601 + 40.7 0.000 Intergenic Intergenic -27837 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr12-102 chr12 2890615 2890825 + 40.7 0.000 promoter-TSS (NM_001160408) promoter-TSS (NM_001160408) -171 NM_003324 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 TUB like protein 3 protein-coding chr11-231 chr11 73185875 73186085 + 40.5 0.000 Intergenic Intergenic -32301 NM_002564 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr17-122 chr17 2303626 2303836 + 40.5 0.000 promoter-TSS (NM_021947) promoter-TSS (NM_021947) 54 NM_017575 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr10-131 chr10 103053937 103054147 + 40.5 0.000 intron (NM_199076, intron 2 of 6) intron (NM_199076, intron 2 of 6) 99779 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr9-309 chr9 128554603 128554813 + 40.5 0.000 intron (NM_003127, intron 1 of 55) intron (NM_003127, intron 1 of 55) 2121 NM_001363759 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr19-410 chr19 4369305 4369515 + 40.5 0.000 intron (NM_003025, intron 1 of 9) intron (NM_003025, intron 1 of 9) 25883 NM_001159846 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding chr11-235 chr11 83071816 83072026 + 40.5 0.000 promoter-TSS (NM_001286060) promoter-TSS (NM_001286060) -24 NM_001286060 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr1-300 chr1 214602974 214603184 + 40.5 0.000 promoter-TSS (NM_016343) promoter-TSS (NM_016343) -116 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr15-138 chr15 26082464 26082674 + 40.5 0.000 Intergenic CpG -33244 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr12-170 chr12 124518325 124518535 + 40.5 0.000 intron (NM_001077261, intron 2 of 47) CpG 49182 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr7-149 chr7 100101397 100101607 + 40.5 0.000 promoter-TSS (NM_004722) promoter-TSS (NM_004722) -141 NM_004722 9179 Hs.632317 NM_004722 ENSG00000221838 AP4M1 CPSQ3|MU-4|MU-ARP2|SPG50 adaptor related protein complex 4 subunit mu 1 protein-coding chr19-402 chr19 21505423 21505633 + 40.5 0.000 promoter-TSS (NM_001346913) promoter-TSS (NM_001346913) -74 NM_001001415 353088 Hs.572567 NM_001001415 ENSG00000197013 ZNF429 - zinc finger protein 429 protein-coding chr1-175 chr1 151146784 151146994 + 40.5 0.000 promoter-TSS (NM_001178062) promoter-TSS (NM_001178062) -258 NM_030913 10500 Hs.516316 NM_030913 ENSG00000143434 SEMA6C SEMAY|m-SemaY|m-SemaY2 semaphorin 6C protein-coding chr1-321 chr1 21512049 21512259 + 40.5 0.000 intron (NM_001177520, intron 1 of 9) intron (NM_001177520, intron 1 of 9) 2731 NM_000478 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr15-96 chr15 59350223 59350433 + 40.5 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 22543 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr1-124 chr1 200669683 200669893 + 40.5 0.000 promoter-TSS (NM_001349799) promoter-TSS (NM_001349799) -52 NM_001349799 83479 Hs.497332 NM_031306 ENSG00000118197 DDX59 OFD5|ZNHIT5 DEAD-box helicase 59 protein-coding chr1-215 chr1 182029512 182029722 + 40.4 0.000 Intergenic Intergenic 32095 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr1-316 chr1 37931789 37931999 + 40.4 0.000 promoter-TSS (NM_001297434) promoter-TSS (NM_001297434) -103 NR_158631 3633 Hs.449942 NM_005540 ENSG00000204084 INPP5B 5PTase inositol polyphosphate-5-phosphatase B protein-coding chr9-276 chr9 116234154 116234364 + 40.4 0.000 intron (NM_002581, intron 6 of 21) intron (NM_002581, intron 6 of 21) 80468 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr2-185 chr2 105261151 105261361 + 40.4 0.000 intron (NM_001328646, intron 11 of 11) intron (NM_001328646, intron 11 of 11) 19513 NM_007227 11250 Hs.590903 NM_007227 ENSG00000135973 GPR45 PSP24|PSP24(ALPHA)|PSP24A G protein-coupled receptor 45 protein-coding chr19-275 chr19 53103390 53103600 + 40.4 0.000 promoter-TSS (NM_001102603) promoter-TSS (NM_001102603) -61 NM_001322129 90338 Hs.655967 NM_033288 ENSG00000170949 ZNF160 F11|HKr18|HZF5|KR18 zinc finger protein 160 protein-coding chr4-89 chr4 7630710 7630920 + 40.4 0.000 intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) -123275 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr17-108 chr17 45051495 45051705 + 40.4 0.000 promoter-TSS (NM_001128631) promoter-TSS (NM_001128631) 32 NM_001288655 79877 Hs.463148 NM_024819 ENSG00000172992 DCAKD - dephospho-CoA kinase domain containing protein-coding chr17-578 chr17 82396694 82396904 + 40.4 0.000 intron (NR_033265, intron 8 of 9) intron (NR_033265, intron 8 of 9) -21548 NM_001330542 284004 Hs.744207 NM_173620 ENSG00000169660 HEXD HEXDC hexosaminidase D protein-coding chr12-258 chr12 26746463 26746673 + 40.4 0.000 intron (NM_002223, intron 2 of 56) intron (NM_002223, intron 2 of 56) 86626 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr3-185 chr3 53270079 53270289 + 40.4 0.000 Intergenic Intergenic -14070 NR_047580 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr15-93 chr15 52481849 52482059 + 40.4 0.000 intron (NM_001142495, intron 1 of 39) LTR101_Mam|LTR|ERVL 46926 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr17-224 chr17 28719514 28719724 + 40.4 0.000 promoter-TSS (NR_000013) promoter-TSS (NR_000013) -366 NM_000984 6147 Hs.419463 NM_000984 ENSG00000198242 RPL23A L23A|MDA20 ribosomal protein L23a protein-coding chr16-84 chr16 2124996 2125206 + 40.4 0.000 intron (NM_000296, intron 1 of 45) intron (NM_000296, intron 1 of 45) -8018 NR_039741 100616258 NR_039741 ENSG00000265867 MIR4516 mir-4516 microRNA 4516 ncRNA chr13-37 chr13 27079534 27079744 + 40.4 0.000 intron (NM_182488, intron 6 of 8) intron (NM_182488, intron 6 of 8) -45894 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr11-165 chr11 72722389 72722599 + 40.4 0.000 promoter-TSS (NM_001135190) promoter-TSS (NM_001135190) -136 NM_015242 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr5-88 chr5 56909637 56909847 + 40.4 0.000 promoter-TSS (NM_001323020) promoter-TSS (NM_001323020) 146 NM_001171990 133383 Hs.85950 NM_153706 ENSG00000155542 SETD9 C5orf35 SET domain containing 9 protein-coding chr13-71 chr13 20419906 20420116 + 40.4 0.000 intron (NM_001363647, intron 4 of 6) intron (NM_001363647, intron 4 of 6) 13835 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr8-104 chr8 143986399 143986609 + 40.4 0.000 promoter-TSS (NM_001317895) promoter-TSS (NM_001317895) -44 NM_001317895 84875 Hs.348609 NM_032789 ENSG00000178685 PARP10 ARTD10 poly(ADP-ribose) polymerase family member 10 protein-coding chr2-519 chr2 160205529 160205739 + 40.3 0.000 Intergenic Intergenic -5321 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chrX-26 chrX 63755081 63755291 + 40.3 0.000 promoter-TSS (NM_001353923) promoter-TSS (NM_001353923) 30 NM_001353923 23229 Hs.54697 NM_015185 ENSG00000131089 ARHGEF9 COLLYBISTIN|EIEE8|HPEM-2|PEM-2|PEM2 Cdc42 guanine nucleotide exchange factor 9 protein-coding chr5-82 chr5 108728200 108728410 + 40.3 0.000 promoter-TSS (NR_046368) promoter-TSS (NR_046368) -44 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr7-223 chr7 135254127 135254337 + 40.3 0.000 intron (NM_182489, intron 7 of 8) intron (NM_182489, intron 7 of 8) 22253 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr9-260 chr9 19049171 19049381 + 40.3 0.000 promoter-TSS (NM_006570) promoter-TSS (NM_006570) 78 NM_001287049 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr7-139 chr7 2175608 2175818 + 40.3 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) 57232 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr7-115 chr7 149195477 149195687 + 40.3 0.000 promoter-TSS (NM_003575) promoter-TSS (NM_003575) 36 NM_001303481 8427 Hs.729056 NM_003575 ENSG00000170265 ZNF282 HUB1 zinc finger protein 282 protein-coding chr9-109 chr9 135501132 135501342 + 40.3 0.000 non-coding (NR_051969, exon 2 of 4) non-coding (NR_051969, exon 2 of 4) 555 NR_051968 51116 Hs.382044 NM_016034 ENSG00000122140 MRPS2 CGI-91|COXPD36|MRP-S2|S2mt mitochondrial ribosomal protein S2 protein-coding chr20-36 chr20 46406447 46406657 + 40.3 0.000 promoter-TSS (NM_001318253) promoter-TSS (NM_001318253) 63 NM_133171 63916 Hs.210469 NM_022086 ENSG00000062598 ELMO2 CED-12|CED12|Ced-12A|ELMO-2|VMPI engulfment and cell motility 2 protein-coding chr14-77 chr14 39114262 39114472 + 40.3 0.000 promoter-TSS (NM_001009182) promoter-TSS (NM_001009182) 83 NM_001009183 8487 Hs.652307 NM_003616 ENSG00000092208 GEMIN2 SIP1|SIP1-delta gem nuclear organelle associated protein 2 protein-coding chr4-231 chr4 106583703 106583913 + 40.3 0.000 Intergenic Intergenic 150184 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA chr19-391 chr19 49451800 49452010 + 40.3 0.000 promoter-TSS (NM_017916) promoter-TSS (NM_017916) -91 NM_017916 55011 Hs.5245 NM_017916 ENSG00000104872 PIH1D1 NOP17|Pih1 PIH1 domain containing 1 protein-coding chr13-38 chr13 41132622 41132832 + 40.3 0.000 promoter-TSS (NR_120423) promoter-TSS (NR_120423) 75 NM_152903 89890 Hs.534040 NM_152903 ENSG00000165572 KBTBD6 - kelch repeat and BTB domain containing 6 protein-coding chr7-122 chr7 129434343 129434553 + 40.3 0.000 promoter-TSS (NM_001134336) promoter-TSS (NM_001134336) 16 NM_020704 57464 Hs.489988 NM_020704 ENSG00000128578 STRIP2 FAM40B|FAR11B striatin interacting protein 2 protein-coding chr1-407 chr1 9766821 9767031 + 40.3 0.000 intron (NM_001009566, intron 2 of 18) intron (NM_001009566, intron 2 of 18) 57600 NM_014944 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr7-180 chr7 108569706 108569916 + 40.3 0.000 promoter-TSS (NM_001130475) promoter-TSS (NM_001130475) -43 NM_001287599 168451 Hs.707689 NM_182529 ENSG00000177683 THAP5 - THAP domain containing 5 protein-coding chr11-154 chr11 46826686 46826896 + 40.3 0.000 intron (NM_001008938, intron 1 of 43) intron (NM_001008938, intron 1 of 43) 19489 NM_001008938 9793 Hs.201253 NM_014756 ENSG00000175216 CKAP5 CHTOG|MSPS|TOG|TOGp|ch-TOG cytoskeleton associated protein 5 protein-coding chr16-201 chr16 84603152 84603362 + 40.3 0.000 intron (NM_021149, intron 2 of 3) intron (NM_021149, intron 2 of 3) 14821 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr8-58 chr8 96261641 96261851 + 40.3 0.000 promoter-TSS (NM_001290225) promoter-TSS (NM_001290225) -133 NM_001286643 51001 Hs.308613 NM_015942 ENSG00000156469 MTERF3 CGI-12|MTERFD1 mitochondrial transcription termination factor 3 protein-coding chrX-41 chrX 72181528 72181738 + 40.3 0.000 promoter-TSS (NM_001170747) promoter-TSS (NM_001170747) -43 NM_001170747 5303 Hs.655623 NM_006223 ENSG00000102309 PIN4 EPVH|PAR14|PAR17 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 protein-coding chr22-123 chr22 21652068 21652278 + 40.2 0.000 promoter-TSS (NR_030622) promoter-TSS (NR_030622) -808 NR_030622 100126318 NR_030622 ENSG00000212102 MIR301B MIRN301B|mir-301b microRNA 301b ncRNA chr8-98 chr8 13514830 13515040 + 40.2 0.000 promoter-TSS (NM_182643) promoter-TSS (NM_182643) -84 NM_024767 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr1-308 chr1 150548744 150548954 + 40.2 0.000 promoter-TSS (NM_001288607) promoter-TSS (NM_001288607) -520 NM_001288608 54507 Hs.516243 NM_019032 ENSG00000143382 ADAMTSL4 ADAMTSL-4|ECTOL2|TSRC1 ADAMTS like 4 protein-coding chr7-77 chr7 44123551 44123761 + 40.2 0.000 promoter-TSS (NM_001127218) promoter-TSS (NM_001127218) -86 NM_006230 5425 Hs.306791 NM_006230 ENSG00000106628 POLD2 - DNA polymerase delta 2, accessory subunit protein-coding chr6-46 chr6 170584618 170584828 + 40.2 0.000 promoter-TSS (NM_002598) promoter-TSS (NM_002598) -31 NM_001199461 5134 Hs.367900 NM_002598 ENSG00000071994 PDCD2 RP8|ZMYND7 programmed cell death 2 protein-coding chr19-412 chr19 12610725 12610935 + 40.2 0.000 promoter-TSS (NM_020714) promoter-TSS (NM_020714) -17 NM_020714 57474 Hs.655860 NM_020714 ENSG00000188033 ZNF490 - zinc finger protein 490 protein-coding chr10-218 chr10 520632 520842 + 40.2 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -107827 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr1-329 chr1 19398454 19398664 + 40.2 0.000 intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 85736 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr16-350 chr16 1019291 1019501 + 40.2 0.000 Intergenic CpG 37626 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr20-13 chr20 21125813 21126023 + 40.2 0.000 promoter-TSS (NM_001352434) promoter-TSS (NM_001352434) -57 NM_001276389 55857 Hs.187635 NM_018474 ENSG00000088970 KIZ C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69 kizuna centrosomal protein protein-coding chr6-120 chr6 16741114 16741324 + 40.2 0.000 intron (NR_152112, intron 1 of 1) MIRc|SINE|MIR 18965 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr9-196 chr9 130183282 130183492 + 40.2 0.000 intron (NM_014286, intron 1 of 7) intron (NM_014286, intron 1 of 7) 10983 NM_014286 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr8-79 chr8 41770622 41770832 + 40.2 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 26895 NM_000037 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr9-131 chr9 96854339 96854549 + 40.2 0.000 promoter-TSS (NM_001346991) promoter-TSS (NM_001346991) 70 NM_001346995 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding chr2-233 chr2 1707797 1708007 + 40.2 0.000 intron (NM_012293, intron 1 of 22) intron (NM_012293, intron 1 of 22) 36613 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr10-135 chr10 3107418 3107628 + 40.2 0.000 intron (NM_001242339, intron 10 of 23) intron (NM_001242339, intron 10 of 23) 2914 NM_001323073 5214 Hs.26010 NM_002627 ENSG00000067057 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding chr1-129 chr1 993636 993846 + 40.2 0.000 Intergenic MSTA|LTR|ERVL-MaLR 6356 NM_021170 57801 Hs.154029 NM_021170 ENSG00000188290 HES4 bHLHb42 hes family bHLH transcription factor 4 protein-coding chr4-94 chr4 146945812 146946022 + 40.1 0.000 promoter-TSS (NM_001317806) promoter-TSS (NM_001317806) -31 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr22-88 chr22 29799369 29799579 + 40.1 0.000 intron (NM_001369943, intron 13 of 17) intron (NM_001369943, intron 13 of 17) 32105 NM_001003684 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding chr10-246 chr10 103273091 103273301 + 40.1 0.000 Intergenic Intergenic -3942 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr7-144 chr7 152025704 152025914 + 40.1 0.000 non-coding (NR_163958, exon 1 of 4) non-coding (NR_163958, exon 1 of 4) 135 NR_163958 chr2-150 chr2 20051902 20052112 + 40.1 0.000 promoter-TSS (NM_014713) promoter-TSS (NM_014713) -379 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr12-83 chr12 48956515 48956725 + 40.1 0.000 intron (NM_001659, intron 1 of 4) intron (NM_001659, intron 1 of 4) 867 NM_001659 377 Hs.119177 NM_001659 ENSG00000134287 ARF3 - ADP ribosylation factor 3 protein-coding chr9-388 chr9 92501824 92502034 + 40.1 0.000 intron (NM_001197296, intron 8 of 9) intron (NM_001197296, intron 8 of 9) -19423 NM_017680 54829 Hs.435655 NM_017680 ENSG00000106819 ASPN OS3|PLAP-1|PLAP1|SLRR1C asporin protein-coding chr9-283 chr9 2559445 2559655 + 40.1 0.000 intron (NR_015375, intron 1 of 3) L1M1|LINE|L1 -62237 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr16-244 chr16 67935784 67935994 + 40.1 0.000 intron (NM_002801, intron 4 of 7) CpG-9855 961 NM_002801 5699 Hs.9661 NM_002801 ENSG00000205220 PSMB10 LMP10|MECL1|beta2i proteasome subunit beta 10 protein-coding chr3-246 chr3 52057237 52057447 + 40.1 0.000 promoter-TSS (NM_001947) promoter-TSS (NM_001947) -771 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr12-158 chr12 124422681 124422891 + 40.1 0.000 intron (NM_001077261, intron 13 of 47) intron (NM_001077261, intron 13 of 47) -85544 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr16-181 chr16 85461847 85462057 + 40.1 0.000 Intergenic Intergenic -149457 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr16-133 chr16 10944390 10944600 + 40.1 0.000 promoter-TSS (NM_001243403) promoter-TSS (NM_001243403) 7 NM_001243403 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr5-89 chr5 133026377 133026587 + 40.1 0.000 promoter-TSS (NM_001300822) promoter-TSS (NM_001300822) 67 NM_001308127 54819 Hs.29700 NM_017665 ENSG00000155329 ZCCHC10 - zinc finger CCHC-type containing 10 protein-coding chr4-199 chr4 70688221 70688431 + 40.1 0.000 promoter-TSS (NM_020368) promoter-TSS (NM_020368) -206 NM_020368 57050 Hs.322901 NM_020368 ENSG00000132467 UTP3 CRL1|CRLZ1|SAS10 UTP3 small subunit processome component protein-coding chr11-260 chr11 65006897 65007107 + 40.1 0.000 Intergenic Intergenic -7111 NR_037650 100528018 Hs.80132 NR_037650 ENSG00000273003 ARL2-SNX15 - ARL2-SNX15 readthrough (NMD candidate) ncRNA chr11-376 chr11 31509739 31509949 + 40.1 0.000 promoter-TSS (NM_019040) promoter-TSS (NM_019040) 77 NM_019040 26610 Hs.175534 NM_019040 ENSG00000109911 ELP4 AN|AN2|C11orf19|PAX6NEB|PAXNEB|dJ68P15A.1|hELP4 elongator acetyltransferase complex subunit 4 protein-coding chr13-83 chr13 46052680 46052890 + 40.1 0.000 promoter-TSS (NM_015070) promoter-TSS (NM_015070) -39 NM_001330566 23091 Hs.136102 NM_015070 ENSG00000123200 ZC3H13 KIAA0853|Xio zinc finger CCCH-type containing 13 protein-coding chr19-286 chr19 58558893 58559103 + 40.1 0.000 promoter-TSS (NR_027334) promoter-TSS (NR_027334) -188 NR_027334 100131691 Hs.743767 NR_027334 ENSG00000267858 MZF1-AS1 - MZF1 antisense RNA 1 ncRNA chr8-74 chr8 91070080 91070290 + 39.9 0.000 promoter-TSS (NM_016023) promoter-TSS (NM_016023) 4 NR_110438 100506365 Hs.153412 NR_110438 ENSG00000253738 OTUD6B-AS1 GS1-251I9.4 OTUD6B antisense RNA 1 (head to head) ncRNA chr6-119 chr6 159900472 159900682 + 39.9 0.000 intron (NM_002377, intron 2 of 2) intron (NM_002377, intron 2 of 2) 9589 NM_002377 4142 Hs.99900 NM_002377 ENSG00000130368 MAS1 MAS|MGRA MAS1 proto-oncogene, G protein-coupled receptor protein-coding chr4-52 chr4 1043631 1043841 + 39.9 0.000 Intergenic Intergenic 31272 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr20-65 chr20 33666730 33666940 + 39.9 0.000 promoter-TSS (NM_001024675) promoter-TSS (NM_001024675) -108 NM_001024675 170487 Hs.592151 NM_001024675 ENSG00000182584 ACTL10 C20orf134|dJ63M2.2 actin like 10 protein-coding chr17-199 chr17 82885919 82886129 + 39.9 0.000 intron (NM_005993, intron 15 of 38) intron (NM_005993, intron 15 of 38) -46002 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr1-352 chr1 32200551 32200761 + 39.9 0.000 promoter-TSS (NM_001301011) promoter-TSS (NM_001301011) 61 NM_001301011 79140 Hs.534482 NM_024296 ENSG00000160050 CCDC28B - coiled-coil domain containing 28B protein-coding chr1-378 chr1 206674958 206675168 + 39.9 0.000 Intergenic Intergenic -9842 NM_032960 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr17-120 chr17 31901664 31901874 + 39.9 0.000 promoter-TSS (NM_018428) promoter-TSS (NM_018428) -61 NM_018428 55813 Hs.589862 NM_018428 ENSG00000108651 UTP6 C17orf40|HCA66 UTP6 small subunit processome component protein-coding chr3-123 chr3 25664883 25665093 + 39.9 0.000 promoter-TSS (NM_001068) promoter-TSS (NM_001068) -49 NR_039644 100616477 NR_039644 ENSG00000283971 MIR4442 mir-4442 microRNA 4442 ncRNA chr5-208 chr5 9924659 9924869 + 39.9 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -20940 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr4-114 chr4 57081233 57081443 + 39.9 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -28424 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr7-142 chr7 16645597 16645807 + 39.9 0.000 promoter-TSS (NM_001159767) promoter-TSS (NM_001159767) 52 NM_020319 57037 Hs.157378 NM_020319 ENSG00000106524 ANKMY2 ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding chr20-47 chr20 63699114 63699324 + 39.9 0.000 TTS (NR_037882) TTS (NR_037882) 2567 NM_003823 8771 Hs.434878 NM_003823 ENSG00000243509 TNFRSF6B DCR3|DJ583P15.1.1|M68|M68E|TR6 TNF receptor superfamily member 6b protein-coding chr10-69 chr10 124916753 124916963 + 39.9 0.000 Intergenic CpG -25265 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr1-309 chr1 154970793 154971003 + 39.9 0.000 promoter-TSS (NM_001130040) promoter-TSS (NM_001130040) -151 NM_001130040 6464 Hs.433795 NM_003029 ENSG00000160691 SHC1 SHC|SHCA SHC adaptor protein 1 protein-coding chr17-180 chr17 28711375 28711585 + 39.9 0.000 promoter-TSS (NM_001304952) promoter-TSS (NM_001304952) -181 NM_001304952 147011 Hs.207471 NM_152465 ENSG00000167525 PROCA1 - protein interacting with cyclin A1 protein-coding chr1-291 chr1 19011055 19011265 + 39.9 0.000 Intergenic Intergenic -54484 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr12-90 chr12 401397 401607 + 39.9 0.000 promoter-TSS (NM_032358) promoter-TSS (NM_032358) -142 NM_001130146 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr12-312 chr12 1350368 1350578 + 39.9 0.000 intron (NR_027948, intron 15 of 19) intron (NR_027948, intron 15 of 19) -150018 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr1-153 chr1 9539205 9539415 + 39.9 0.000 promoter-TSS (NM_032315) promoter-TSS (NM_032315) -155 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr1-312 chr1 1318303 1318513 + 39.9 0.000 intron (NM_001256463, intron 2 of 14) AluJb|SINE|Alu -5842 NR_106785 102465435 NR_106785 ENSG00000283712 MIR6727 hsa-mir-6727 microRNA 6727 ncRNA chr2-265 chr2 10297983 10298193 + 39.9 0.000 Intergenic Intergenic -4816 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr11-175 chr11 111541757 111541967 + 39.8 0.000 intron (NM_001258390, intron 2 of 7) intron (NM_001258390, intron 2 of 7) 1354 NM_001258390 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr2-287 chr2 112150540 112150750 + 39.8 0.000 intron (NM_001128165, intron 1 of 6) MIR|SINE|MIR 12260 NM_153214 129804 Hs.437696 NM_153214 ENSG00000144152 FBLN7 TM14 fibulin 7 protein-coding chr19-272 chr19 893002 893212 + 39.8 0.000 promoter-TSS (NM_005481) promoter-TSS (NM_005481) 80 NM_005481 10025 Hs.365207 NM_005481 ENSG00000175221 MED16 DRIP92|THRAP5|TRAP95 mediator complex subunit 16 protein-coding chr20-66 chr20 49046080 49046290 + 39.8 0.000 promoter-TSS (NM_001256135) promoter-TSS (NM_001256135) -61 NM_001256135 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr13-34 chr13 24922829 24923039 + 39.8 0.000 promoter-TSS (NR_047595) promoter-TSS (NR_047595) -73 NM_018451 55835 Hs.513379 NM_018451 ENSG00000151849 CENPJ BM032|CENP-J|CPAP|LAP|LIP1|MCPH6|SASS4|SCKL4|Sas-4 centromere protein J protein-coding chr2-73 chr2 231604816 231605026 + 39.8 0.000 Intergenic CpG 12057 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr10-280 chr10 99430681 99430891 + 39.8 0.000 promoter-TSS (NM_002079) promoter-TSS (NM_002079) -162 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr22-96 chr22 42688571 42688781 + 39.8 0.000 Intergenic Intergenic 32194 NR_146459 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr16-132 chr16 11797337 11797547 + 39.8 0.000 promoter-TSS (NM_014153) promoter-TSS (NM_014153) -184 NM_014153 29066 Hs.371856 NM_014153 ENSG00000122299 ZC3H7A HSPC055|ZC3H7|ZC3HDC7 zinc finger CCCH-type containing 7A protein-coding chr1-218 chr1 35557468 35557678 + 39.8 0.000 promoter-TSS (NM_024874) promoter-TSS (NM_024874) -170 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr7-218 chr7 99379363 99379573 + 39.8 0.000 intron (NM_005720, intron 1 of 9) intron (NM_005720, intron 1 of 9) 4738 NM_005720 10095 Hs.489284 NM_005720 ENSG00000130429 ARPC1B ARC41|PLTEID|p40-ARC|p41-ARC actin related protein 2/3 complex subunit 1B protein-coding chr11-301 chr11 62727403 62727613 + 39.8 0.000 promoter-TSS (NR_037946) promoter-TSS (NR_037946) -51 NM_001079559 221092 Hs.657058 NM_001079559 ENSG00000214753 HNRNPUL2 HNRPUL2|SAF-A2 heterogeneous nuclear ribonucleoprotein U like 2 protein-coding chr20-101 chr20 37071486 37071696 + 39.8 0.000 intron (NM_002895, intron 2 of 21) AluJb|SINE|Alu 24406 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr11-218 chr11 43311829 43312039 + 39.8 0.000 promoter-TSS (NM_001142930) promoter-TSS (NM_001142930) -62 NR_024625 8539 Hs.435771 NM_006595 ENSG00000166181 API5 AAC-11|AAC11 apoptosis inhibitor 5 protein-coding chr1-216 chr1 15617238 15617448 + 39.7 0.000 promoter-TSS (NM_032341) promoter-TSS (NM_032341) -115 NM_032341 84301 Hs.718857 NM_032341 ENSG00000197312 DDI2 - DNA damage inducible 1 homolog 2 protein-coding chr3-296 chr3 33392855 33393065 + 39.7 0.000 intron (NM_001128160, intron 13 of 14) intron (NM_001128160, intron 13 of 14) 47418 NM_001128160 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr19-537 chr19 57814836 57815046 + 39.7 0.000 promoter-TSS (NM_024762) promoter-TSS (NM_024762) -28 NM_024762 79818 Hs.560727 NM_024762 ENSG00000178935 ZNF552 - zinc finger protein 552 protein-coding chr9-90 chr9 93095585 93095795 + 39.7 0.000 promoter-TSS (NR_134464) promoter-TSS (NR_134464) -527 NR_134464 84270 Hs.434213 NM_032310 ENSG00000165233 CARD19 BinCARD|C9orf89 caspase recruitment domain family member 19 protein-coding chr5-45 chr5 179060303 179060513 + 39.7 0.000 promoter-TSS (NM_014594) promoter-TSS (NM_014594) 35 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr2-157 chr2 27323127 27323337 + 39.7 0.000 promoter-TSS (NM_002437) promoter-TSS (NM_002437) -135 NM_002437 4358 Hs.75659 NM_002437 ENSG00000115204 MPV17 CMT2EE|MTDPS6|SYM1 mitochondrial inner membrane protein MPV17 protein-coding chr1-334 chr1 173868073 173868283 + 39.7 0.000 promoter-TSS (NR_152534) promoter-TSS (NR_152534) 96 NM_001346115 84614 Hs.668497 NM_032522 ENSG00000185278 ZBTB37 D430004I08Rik|ZNF908 zinc finger and BTB domain containing 37 protein-coding chr10-154 chr10 70816431 70816641 + 39.7 0.000 intron (NM_003901, intron 1 of 14) CpG 588 NM_003901 8879 Hs.499984 NM_003901 ENSG00000166224 SGPL1 NPHS14|S1PL|SPL sphingosine-1-phosphate lyase 1 protein-coding chr16-129 chr16 2023065 2023275 + 39.7 0.000 Intergenic Intergenic 3385 NM_001099456 283869 Hs.233533 NM_001099456 ENSG00000183971 NPW L8|L8C|PPL8|PPNPW neuropeptide W protein-coding chr5-144 chr5 127030610 127030820 + 39.7 0.000 promoter-TSS (NM_178450) promoter-TSS (NM_178450) -157 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr16-120 chr16 85612306 85612516 + 39.6 0.000 promoter-TSS (NM_014615) promoter-TSS (NM_014615) -911 NM_014615 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr18-35 chr18 9913569 9913779 + 39.6 0.000 promoter-TSS (NM_003574) promoter-TSS (NM_003574) -342 NM_194434 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr2-393 chr2 217105794 217106004 + 39.6 0.000 Intergenic X2_LINE|LINE|CR1 -176834 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr21-39 chr21 34129194 34129404 + 39.6 0.000 intron (NM_032476, intron 2 of 2) intron (NM_032476, intron 2 of 2) -51378 NR_027267 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA chr9-321 chr9 13139921 13140131 + 39.6 0.000 exon (NM_001330637, exon 28 of 47) exon (NM_001330637, exon 28 of 47) 139538 NM_001261406 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr1-358 chr1 166876334 166876544 + 39.6 0.000 promoter-TSS (NM_053053) promoter-TSS (NM_053053) -175 NM_053053 117143 Hs.435967 NM_053053 ENSG00000152382 TADA1 ADA1|HFI1|STAF42|TADA1L|hADA1 transcriptional adaptor 1 protein-coding chr4-134 chr4 40057853 40058063 + 39.6 0.000 promoter-TSS (NR_027277) promoter-TSS (NR_027277) -759 NR_027277 344967 Hs.534633 NR_027277 ENSG00000205794 LOC344967 - acyl-CoA thioesterase 7 pseudogene pseudo chr17-145 chr17 78934109 78934319 + 39.6 0.000 Intergenic Intergenic -8827 NM_003255 7077 Hs.633514 NM_003255 ENSG00000035862 TIMP2 CSC-21K|DDC8 TIMP metallopeptidase inhibitor 2 protein-coding chr19-308 chr19 51108283 51108493 + 39.6 0.000 promoter-TSS (NM_145232) promoter-TSS (NM_145232) 21 NM_145232 90353 Hs.148425 NM_145232 ENSG00000142544 CTU1 ATPBD3|NCS6 cytosolic thiouridylase subunit 1 protein-coding chr5-79 chr5 177496832 177497042 + 39.6 0.000 intron (NR_103804, intron 1 of 12) CpG 667 NM_203352 9260 Hs.533040 NM_005451 ENSG00000196923 PDLIM7 LMP1|LMP3 PDZ and LIM domain 7 protein-coding chr2-111 chr2 134918320 134918530 + 39.6 0.000 promoter-TSS (NM_058241) promoter-TSS (NM_058241) 181 NR_036549 100129961 Hs.729028 NR_036549 CCNT2-AS1 - CCNT2 antisense RNA 1 ncRNA chr16-158 chr16 67719253 67719463 + 39.6 0.000 promoter-TSS (NM_030819) promoter-TSS (NM_030819) -42 NM_001243650 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr1-477 chr1 170126738 170126948 + 39.6 0.000 Intergenic L1MD1|LINE|L1 -19204 NM_001136107 149281 Hs.553612 NM_001136107 ENSG00000203740 METTL11B C1orf184|HOMT1B|NTM1B methyltransferase like 11B protein-coding chr9-219 chr9 130913254 130913464 + 39.6 0.000 intron (NM_001145106, intron 5 of 7) CpG -16547 NM_198180 347148 Hs.660704 NM_198180 ENSG00000188710 QRFP 26RFa|P518 pyroglutamylated RFamide peptide protein-coding chr17-243 chr17 73092678 73092888 + 39.6 0.000 promoter-TSS (NM_001159770) promoter-TSS (NM_001159770) -95 NM_001352692 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr15-73 chr15 64990018 64990228 + 39.6 0.000 promoter-TSS (NM_016630) promoter-TSS (NM_016630) -209 NM_016630 51324 Hs.242458 NM_016630 ENSG00000090487 SPG21 ABHD21|ACP33|BM-019|GL010|MAST SPG21 abhydrolase domain containing, maspardin protein-coding chr5-62 chr5 60699881 60700091 + 39.6 0.000 intron (NM_001145208, intron 1 of 9) CpG 180 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr17-203 chr17 57850064 57850274 + 39.6 0.000 promoter-TSS (NM_016070) promoter-TSS (NM_016070) -125 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chrX-24 chrX 46903869 46904079 + 39.6 0.000 Intergenic Intergenic -4270 NR_046101 724087 Hs.679235 NR_046101 ENSG00000204904 LINC01545 CXorf31 long intergenic non-protein coding RNA 1545 ncRNA chr5-122 chr5 87412878 87413088 + 39.6 0.000 promoter-TSS (NM_001364076) promoter-TSS (NM_001364076) 50 NM_001363539 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr6-68 chr6 11232652 11232862 + 39.6 0.000 promoter-TSS (NM_001271033) promoter-TSS (NM_001271033) -75 NM_001271033 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr20-59 chr20 63957246 63957456 + 39.6 0.000 promoter-TSS (NR_148435) promoter-TSS (NR_148435) -935 NR_148435 54963 Hs.504998 NM_017859 ENSG00000198276 UCKL1 UCK1L|URKL1 uridine-cytidine kinase 1 like 1 protein-coding chr21-18 chr21 33642277 33642487 + 39.5 0.000 promoter-TSS (NM_145858) promoter-TSS (NM_145858) -119 NM_001331011 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr1-500 chr1 204438665 204438875 + 39.5 0.000 intron (NM_002646, intron 24 of 33) intron (NM_002646, intron 24 of 33) -26953 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr19-358 chr19 55385504 55385714 + 39.5 0.000 promoter-TSS (NM_001363697) promoter-TSS (NM_001363697) -323 NM_001136134 6158 Hs.652114 NM_000991 ENSG00000108107 RPL28 L28 ribosomal protein L28 protein-coding chr1-496 chr1 114757942 114758152 + 39.5 0.000 promoter-TSS (NM_001242892) promoter-TSS (NM_001242892) 3 NM_001242891 7812 Hs.69855 NM_007158 ENSG00000009307 CSDE1 D1S155E|UNR cold shock domain containing E1 protein-coding chr9-140 chr9 127519427 127519637 + 39.5 0.000 intron (NM_022833, intron 5 of 13) intron (NM_022833, intron 5 of 13) 49541 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr9-270 chr9 21030810 21031020 + 39.5 0.000 intron (NM_001321903, intron 1 of 8) intron (NM_001321903, intron 1 of 8) 725 NM_001010915 401494 Hs.716678 NM_001010915 ENSG00000188921 HACD4 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 protein-coding chr2-239 chr2 96242377 96242587 + 39.5 0.000 non-coding (NR_046322, exon 4 of 4) non-coding (NR_046322, exon 4 of 4) 23515 NM_001193304 55654 Hs.164303 NM_017849 ENSG00000135956 TMEM127 - transmembrane protein 127 protein-coding chr22-111 chr22 43168584 43168794 + 39.5 0.000 intron (NM_015140, intron 13 of 13) intron (NM_015140, intron 13 of 13) 16754 NM_001256530 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr19-295 chr19 50658198 50658408 + 39.5 0.000 TTS (NM_016148) TTS (NM_016148) 8858 NM_001195076 342918 Hs.531650 NM_001195076 ENSG00000235034 C19orf81 - chromosome 19 open reading frame 81 protein-coding chr3-236 chr3 150062586 150062796 + 39.5 0.000 Intergenic Intergenic -33752 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr19-440 chr19 36797335 36797545 + 39.5 0.000 promoter-TSS (NR_040027) promoter-TSS (NR_040027) -110 NR_040027 284408 Hs.570010 NR_040027 ENSG00000267254 ZNF790-AS1 - ZNF790 antisense RNA 1 ncRNA chr17-257 chr17 15651758 15651968 + 39.5 0.000 5' UTR (NM_006470, exon 4 of 9) 5' UTR (NM_006470, exon 4 of 9) 31088 NM_006470 10626 Hs.123534 NM_006470 ENSG00000221926 TRIM16 EBBP tripartite motif containing 16 protein-coding chr14-25 chr14 103057523 103057733 + 39.5 0.000 promoter-TSS (NM_006035) promoter-TSS (NM_006035) -79 NM_006035 9578 Hs.654634 NM_006035 ENSG00000198752 CDC42BPB MRCKB CDC42 binding protein kinase beta protein-coding chr11-326 chr11 57778513 57778723 + 39.5 0.000 intron (NM_001085467, intron 1 of 16) intron (NM_001085467, intron 1 of 16) 16816 NM_001206887 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr9-124 chr9 136842354 136842564 + 39.5 0.000 promoter-TSS (NM_001080482) promoter-TSS (NM_001080482) -19 NM_001080482 389813 NM_001080482 ENSG00000232434 AJM1 C9orf172|ajm-1 apical junction component 1 homolog protein-coding chr18-55 chr18 10660633 10660843 + 39.4 0.000 Intergenic Intergenic -1195 NR_110777 101927410 Hs.436902 NR_110777 ENSG00000260779 LOC101927410 - uncharacterized LOC101927410 ncRNA chr12-111 chr12 52060234 52060444 + 39.4 0.000 TTS (NM_001202233) TTS (NM_001202233) 8897 NM_173157 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr1-95 chr1 45303567 45303777 + 39.4 0.000 promoter-TSS (NR_024270) promoter-TSS (NR_024270) -238 NR_024270 400752 Hs.334348 NR_024270 ENSG00000281912 LINC01144 - long intergenic non-protein coding RNA 1144 ncRNA chr12-73 chr12 123232920 123233130 + 39.4 0.000 promoter-TSS (NM_001194995) promoter-TSS (NM_001194995) 116 NM_022782 10198 Hs.577404 NM_022782 ENSG00000051825 MPHOSPH9 MPP-9|MPP9 M-phase phosphoprotein 9 protein-coding chr7-246 chr7 104208036 104208246 + 39.4 0.000 promoter-TSS (NM_002553) promoter-TSS (NM_002553) -94 NM_181747 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chr1-335 chr1 174999684 174999894 + 39.4 0.000 promoter-TSS (NM_014412) promoter-TSS (NM_014412) -158 NM_014412 27101 Hs.508524 NM_014412 ENSG00000116161 CACYBP GIG5|PNAS-107|S100A6BP|SIP calcyclin binding protein protein-coding chr1-248 chr1 21931285 21931495 + 39.4 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 5920 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr11-558 chr11 46711029 46711239 + 39.4 0.000 Intergenic Intergenic -8032 NM_000506 2147 Hs.655207 NM_000506 ENSG00000180210 F2 PT|RPRGL2|THPH1 coagulation factor II, thrombin protein-coding chr19-226 chr19 16628178 16628388 + 39.4 0.000 promoter-TSS (NM_004831) promoter-TSS (NM_004831) -79 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr17-183 chr17 82418394 82418604 + 39.4 0.000 promoter-TSS (NM_175902) promoter-TSS (NM_175902) 87 NR_033265 79701 Hs.187505 NM_024648 ENSG00000181396 OGFOD3 C17orf101 2-oxoglutarate and iron dependent oxygenase domain containing 3 protein-coding chr3-161 chr3 185745573 185745783 + 39.4 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) 22226 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr11-323 chr11 126647721 126647931 + 39.4 0.000 intron (NM_001301097, intron 1 of 15) L2a|LINE|L2 -4952 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr14-93 chr14 105088398 105088608 + 39.4 0.000 Intergenic CpG -5644 NR_110546 102723354 Hs.569410 NR_110546 LINC02298 - long intergenic non-protein coding RNA 2298 ncRNA chr17-170 chr17 75456418 75456628 + 39.4 0.000 promoter-TSS (NM_001351202) promoter-TSS (NM_001351202) -112 NM_001321149 9772 Hs.514474 NM_014738 ENSG00000177728 TMEM94 IDDCDF|KIAA0195 transmembrane protein 94 protein-coding chr17-480 chr17 32813110 32813320 + 39.4 0.000 intron (NM_015194, intron 1 of 21) L2c|LINE|L2 63909 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr7-241 chr7 5354907 5355117 + 39.4 0.000 intron (NM_001080495, intron 16 of 29) intron (NM_001080495, intron 16 of 29) 68534 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr10-195 chr10 123995599 123995809 + 39.4 0.000 Intergenic Intergenic 96702 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr16-96 chr16 11742805 11743015 + 39.4 0.000 promoter-TSS (NM_001324024) promoter-TSS (NM_001324024) -53 NM_001324025 51061 Hs.313847 NM_015914 ENSG00000153066 TXNDC11 EFP1 thioredoxin domain containing 11 protein-coding chr16-237 chr16 75011908 75012118 + 39.2 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 12989 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr1-464 chr1 94579987 94580197 + 39.2 0.000 Intergenic L1PA11|LINE|L1 36390 NR_162147 113219466 NR_162147 MIR12133 - microRNA 12133 ncRNA chr1-362 chr1 43946687 43946897 + 39.2 0.000 promoter-TSS (NM_014652) promoter-TSS (NM_014652) -158 NM_014652 9670 Hs.158497 NM_014652 ENSG00000117408 IPO13 IMP13|KAP13|LGL2|RANBP13 importin 13 protein-coding chr19-220 chr19 38004729 38004939 + 39.2 0.000 intron (NM_015073, intron 1 of 21) intron (NM_015073, intron 1 of 21) 97626 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr8-154 chr8 29195590 29195800 + 39.2 0.000 intron (NM_015254, intron 3 of 39) intron (NM_015254, intron 3 of 39) 67375 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr8-23 chr8 124998126 124998336 + 39.2 0.000 promoter-TSS (NM_003129) promoter-TSS (NM_003129) -33 NR_134457 105375744 Hs.575534 NR_134457 ENSG00000253513 LOC105375744 - uncharacterized LOC105375744 ncRNA chr8-83 chr8 42412817 42413027 + 39.2 0.000 Intergenic L3b|LINE|CR1 21042 NM_005662 7419 Hs.699301 NM_005662 ENSG00000078668 VDAC3 HD-VDAC3|VDAC-3 voltage dependent anion channel 3 protein-coding chr12-242 chr12 25151570 25151780 + 39.2 0.000 intron (NR_147909, intron 5 of 14) intron (NR_147909, intron 5 of 14) 43485 NM_001352064 55259 Hs.407771 NM_018272 ENSG00000118307 CASC1 LAS1|PPP1R54 cancer susceptibility 1 protein-coding chr12-128 chr12 62260084 62260294 + 39.2 0.000 promoter-TSS (NR_106740) promoter-TSS (NR_106740) -151 NM_001252079 9958 Hs.434951 NM_006313 ENSG00000135655 USP15 UNPH-2|UNPH4 ubiquitin specific peptidase 15 protein-coding chr2-507 chr2 237731692 237731902 + 39.2 0.000 intron (NM_001137550, intron 8 of 23) intron (NM_001137550, intron 8 of 23) 39592 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chrX-38 chrX 13734649 13734859 + 39.2 0.000 promoter-TSS (NM_001330209) promoter-TSS (NM_001330209) 6 NM_003611 8481 Hs.6483 NM_003611 ENSG00000046651 OFD1 71-7A|CXorf5|JBTS10|RP23|SGBS2 OFD1 centriole and centriolar satellite protein protein-coding chr22-164 chr22 37933907 37934117 + 39.2 0.000 intron (NM_033386, intron 13 of 15) intron (NM_033386, intron 13 of 15) 19589 NM_032561 84645 Hs.517612 NM_032561 ENSG00000128346 C22orf23 EVG1|dJ1039K5.6 chromosome 22 open reading frame 23 protein-coding chr19-293 chr19 45577134 45577344 + 39.2 0.000 intron (NM_025136, intron 1 of 1) intron (NM_025136, intron 1 of 1) 7563 NM_001017989 80207 Hs.466945 NM_025136 ENSG00000125741 OPA3 MGA3 outer mitochondrial membrane lipid metabolism regulator OPA3 protein-coding chr14-85 chr14 20413255 20413465 + 39.2 0.000 intron (NM_001319035, intron 1 of 52) intron (NM_001319035, intron 1 of 52) 141 NM_001319035 7011 Hs.508835 NM_007110 ENSG00000129566 TEP1 TLP1|TP1|TROVE1|VAULT2|p240 telomerase associated protein 1 protein-coding chr2-6 chr2 32916266 32916476 + 39.2 0.000 intron (NR_027099, intron 10 of 10) (G)n|Simple_repeat|Simple_repeat -10756 NR_027097 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr2-204 chr2 101252418 101252628 + 39.2 0.000 promoter-TSS (NM_017546) promoter-TSS (NM_017546) -363 NM_017546 55571 Hs.744080 NM_017546 ENSG00000158435 CNOT11 C2orf29|C40 CCR4-NOT transcription complex subunit 11 protein-coding chr19-296 chr19 58278665 58278875 + 39.2 0.000 promoter-TSS (NR_144447) promoter-TSS (NR_144447) -185 NM_021089 7554 Hs.590941 NM_021089 ENSG00000278129 ZNF8 HF.18|Zfp128 zinc finger protein 8 protein-coding chr2-197 chr2 119366907 119367117 + 39.1 0.000 promoter-TSS (NM_001178043) promoter-TSS (NM_001178043) -36 NM_001352432 1622 Hs.78888 NM_020548 ENSG00000155368 DBI ACBD1|ACBP|CCK-RP|EP diazepam binding inhibitor, acyl-CoA binding protein protein-coding chr17-386 chr17 75035117 75035327 + 39.1 0.000 intron (NR_110835, intron 2 of 7) intron (NR_110835, intron 2 of 7) 2655 NR_110835 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr9-71 chr9 120868702 120868912 + 39.1 0.000 TTS (NM_001286843) TTS (NM_001286843) 104 NM_001286842 26147 Hs.460124 NM_015651 ENSG00000119403 PHF19 MTF2L1|PCL3|TDRD19B PHD finger protein 19 protein-coding chr16-165 chr16 75464478 75464688 + 39.1 0.000 promoter-TSS (NM_001304997) promoter-TSS (NM_001304997) 106 NM_145254 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding chr9-387 chr9 77847178 77847388 + 39.1 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 184528 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr15-60 chr15 90954791 90955001 + 39.1 0.000 promoter-TSS (NM_033544) promoter-TSS (NM_033544) 20 NM_001017919 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 - RCC1 domain containing 1 protein-coding chr21-36 chr21 37452365 37452575 + 39.1 0.000 intron (NM_001347721, intron 2 of 11) MER117|DNA|hAT-Charlie 32171 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr4-67 chr4 674257 674467 + 39.1 0.000 promoter-TSS (NM_007100) promoter-TSS (NM_007100) -86 NM_007100 521 Hs.85539 NM_007100 ENSG00000169020 ATP5ME ATP5I|ATP5K ATP synthase membrane subunit e protein-coding chr14-127 chr14 35809080 35809290 + 39.1 0.000 5' UTR (NM_001346249, exon 1 of 42) 5' UTR (NM_001346249, exon 1 of 42) 110 NM_014990 253959 Hs.113150 NM_014990 ENSG00000174373 RALGAPA1 GARNL1|GRIPE|RalGAPalpha1|TULIP1|p240 Ral GTPase activating protein catalytic alpha subunit 1 protein-coding chr1-138 chr1 22052518 22052728 + 39.1 0.000 promoter-TSS (NM_001791) promoter-TSS (NM_001791) -86 NM_001791 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr8-78 chr8 28411881 28412091 + 39.1 0.000 Intergenic CpG -25526 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr20-45 chr20 18507425 18507635 + 39.1 0.000 promoter-TSS (NM_001172746) promoter-TSS (NM_001172746) 48 NM_032986 10483 Hs.369373 NM_006363 ENSG00000101310 SEC23B CDA-II|CDAII|CDAN2|CWS7|HEMPAS|hSec23B SEC23 homolog B, coat complex II component protein-coding chr17-207 chr17 8190170 8190380 + 39.1 0.000 promoter-TSS (NM_017622) promoter-TSS (NM_017622) -95 NM_017622 54785 Hs.129563 NM_017622 ENSG00000196544 BORCS6 C17orf59|PRO2472 BLOC-1 related complex subunit 6 protein-coding chr14-110 chr14 74619813 74620023 + 39.1 0.000 Intergenic Intergenic -7681 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr8-142 chr8 66219809 66220019 + 39.1 0.000 Intergenic Intergenic 27800 NR_039979 100505659 Hs.529729 NR_039979 ENSG00000253138 LINC00967 - long intergenic non-protein coding RNA 967 ncRNA chr18-34 chr18 44715255 44715465 + 39.1 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 34472 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr16-151 chr16 2882830 2883040 + 39.1 0.000 promoter-TSS (NM_138439) promoter-TSS (NM_138439) -260 NM_001142499 114984 Hs.534525 NM_138439 ENSG00000162076 FLYWCH2 - FLYWCH family member 2 protein-coding chr1-454 chr1 222754379 222754589 + 39.1 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 14800 NM_001324080 400823 Hs.697608 NM_207468 ENSG00000197520 FAM177B - family with sequence similarity 177 member B protein-coding chr11-123 chr11 73376163 73376373 + 39.1 0.000 promoter-TSS (NM_032871) promoter-TSS (NM_032871) -131 NM_152222 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr19-482 chr19 14518670 14518880 + 39.1 0.000 promoter-TSS (NM_001300914) promoter-TSS (NM_001300914) -378 NM_006145 3337 Hs.515210 NM_006145 ENSG00000132002 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ heat shock protein family (Hsp40) member B1 protein-coding chr17-231 chr17 76540857 76541067 + 39.0 0.000 intron (NM_001077620, intron 2 of 4) intron (NM_001077620, intron 2 of 4) 918 NM_001077620 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 photoreceptor disc component protein-coding chr2-234 chr2 11744128 11744338 + 39.0 0.000 intron (NM_001261427, intron 2 of 20) intron (NM_001261427, intron 2 of 20) -2399 NM_001349204 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr6-83 chr6 42217803 42218013 + 39.0 0.000 promoter-TSS (NM_018141) promoter-TSS (NM_018141) -47 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr4-169 chr4 169791730 169791940 + 39.0 0.000 Intergenic Intergenic -33891 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr1-403 chr1 212234715 212234925 + 39.0 0.000 promoter-TSS (NR_125982) promoter-TSS (NR_125982) -84 NR_125982 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr10-134 chr10 125084255 125084465 + 39.0 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -51490 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr7-261 chr7 140404758 140404968 + 39.0 0.000 intron (NM_001008749, intron 1 of 3) L3|LINE|CR1 805 NM_001008749 401409 Hs.583545 NM_001008749 ENSG00000146955 RAB19 RAB19B RAB19, member RAS oncogene family protein-coding chr20-136 chr20 35884105 35884315 + 39.0 0.000 intron (NM_016436, intron 9 of 17) intron (NM_016436, intron 9 of 17) 70416 NM_033630 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding chr16-149 chr16 67174240 67174450 + 39.0 0.000 exon (NM_001185057, exon 2 of 4) exon (NM_001185057, exon 2 of 4) 492 NM_001276311 8996 Hs.513667 NM_003946 ENSG00000140939 NOL3 ARC|FCM|MYOCL1|MYP|NOP|NOP30 nucleolar protein 3 protein-coding chr17-255 chr17 782335 782545 + 39.0 0.000 promoter-TSS (NM_001366248) promoter-TSS (NM_001366248) 87 NM_001317947 55178 Hs.182729 NM_018146 ENSG00000171861 MRM3 RMTL1|RNMTL1 mitochondrial rRNA methyltransferase 3 protein-coding chr11-242 chr11 73787962 73788172 + 39.0 0.000 intron (NR_134658, intron 1 of 6) CpG 193 NM_001318498 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr5-123 chr5 132737370 132737580 + 39.0 0.000 promoter-TSS (NM_001300791) promoter-TSS (NM_001300791) 71 NM_007054 11127 Hs.43670 NM_007054 ENSG00000131437 KIF3A FLA10|KLP-20 kinesin family member 3A protein-coding chr1-621 chr1 225508573 225508783 + 39.0 0.000 intron (NM_001008493, intron 10 of 14) intron (NM_001008493, intron 10 of 14) -79823 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr19-269 chr19 10334864 10335074 + 38.9 0.000 intron (NM_001320605, intron 3 of 5) CpG -1440 NM_133452 125950 Hs.744952 NM_133452 ENSG00000161847 RAVER1 - ribonucleoprotein, PTB binding 1 protein-coding chr3-124 chr3 31532361 31532571 + 38.9 0.000 promoter-TSS (NM_178862) promoter-TSS (NM_178862) -459 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr17-232 chr17 82133701 82133911 + 38.9 0.000 intron (NM_198082, intron 14 of 16) AluSx|SINE|Alu -35570 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr17-432 chr17 62819968 62820178 + 38.9 0.000 intron (NR_135634, intron 1 of 1) intron (NR_135634, intron 1 of 1) 11571 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 MARCH10-DT - MARCH10 divergent transcript ncRNA chr4-198 chr4 57074848 57075058 + 38.9 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -34809 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr3-307 chr3 45551595 45551805 + 38.9 0.000 Intergenic Intergenic -42155 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr4-153 chr4 56958206 56958416 + 38.9 0.000 Intergenic Intergenic 19295 NM_032313 84273 Hs.8715 NM_032313 ENSG00000084092 NOA1 C4orf14|MTG3|hAtNOS1|hNOA1|mAtNOS1 nitric oxide associated 1 protein-coding chr3-371 chr3 67605494 67605704 + 38.9 0.000 intron (NM_001177599, intron 2 of 10) intron (NM_001177599, intron 2 of 10) 49015 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr10-265 chr10 123808944 123809154 + 38.9 0.000 intron (NM_198148, intron 4 of 13) Tigger7|DNA|TcMar-Tigger 82758 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr1-390 chr1 208184453 208184663 + 38.9 0.000 intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 59826 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr17-202 chr17 21214262 21214472 + 38.9 0.000 non-coding (NR_024547, exon 1 of 3) non-coding (NR_024547, exon 1 of 3) 228 NR_024547 8834 Hs.592945 NM_003876 ENSG00000178307 TMEM11 C17orf35|PM1|PMI transmembrane protein 11 protein-coding chr7-265 chr7 77536749 77536959 + 38.9 0.000 promoter-TSS (NM_002835) promoter-TSS (NM_002835) -441 NM_002835 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chrX-42 chrX 134373142 134373352 + 38.9 0.000 promoter-TSS (NM_001015877) promoter-TSS (NM_001015877) -65 NM_001015877 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr10-214 chr10 99732157 99732367 + 38.9 0.000 promoter-TSS (NM_015960) promoter-TSS (NM_015960) 28 NM_015960 51076 Hs.16606 NM_015960 ENSG00000119929 CUTC CGI-32 cutC copper transporter protein-coding chr22-210 chr22 40636771 40636981 + 38.9 0.000 promoter-TSS (NM_001282661) promoter-TSS (NM_001282661) -157 NM_001282662 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr17-250 chr17 29370010 29370220 + 38.9 0.000 Intergenic Intergenic -20547 NR_039749 100616122 NR_039749 ENSG00000284162 MIR4523 - microRNA 4523 ncRNA chr10-71 chr10 124419027 124419237 + 38.9 0.000 promoter-TSS (NM_001322974) promoter-TSS (NM_001322974) -156 NM_001171814 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr2-113 chr2 174248690 174248900 + 38.9 0.000 promoter-TSS (NM_001328688) promoter-TSS (NM_001328688) -263 NM_001328688 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr1-117 chr1 11934612 11934822 + 38.9 0.000 promoter-TSS (NM_000302) promoter-TSS (NM_000302) 0 NM_001316320 5351 Hs.75093 NM_000302 ENSG00000083444 PLOD1 EDS6|EDSKCL1|LH|LH1|LLH|PLOD procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 protein-coding chr13-77 chr13 30033729 30033939 + 38.9 0.000 Intergenic Intergenic 75041 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr16-113 chr16 1812809 1813019 + 38.9 0.000 intron (NM_005326, intron 7 of 8) L1M5|LINE|L1 13911 NM_005326 3029 Hs.157394 NM_005326 ENSG00000063854 HAGH GLO2|GLX2|GLXII|HAGH1 hydroxyacylglutathione hydrolase protein-coding chr16-89 chr16 69311247 69311457 + 38.9 0.000 promoter-TSS (NM_013245) promoter-TSS (NM_013245) 2 NM_013245 27183 Hs.128420 NM_013245 ENSG00000132612 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A protein-coding chr2-462 chr2 27081220 27081430 + 38.9 0.000 intron (NM_007046, intron 3 of 7) intron (NM_007046, intron 3 of 7) 2710 NM_007046 11117 Hs.63348 NM_007046 ENSG00000138080 EMILIN1 EMI|EMILIN|gp115 elastin microfibril interfacer 1 protein-coding chr7-293 chr7 81769970 81770180 + 38.9 0.000 promoter-TSS (NM_000601) promoter-TSS (NM_000601) -28 NM_001010933 3082 Hs.396530 NM_000601 ENSG00000019991 HGF DFNB39|F-TCF|HGFB|HPTA|SF hepatocyte growth factor protein-coding chr10-96 chr10 72273711 72273921 + 38.8 0.000 promoter-TSS (NM_019058) promoter-TSS (NM_019058) -108 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr7-152 chr7 130070305 130070515 + 38.8 0.000 promoter-TSS (NM_014997) promoter-TSS (NM_014997) -124 NM_014997 23008 Hs.520710 NM_014997 ENSG00000128607 KLHDC10 slim kelch domain containing 10 protein-coding chr3-187 chr3 16264957 16265167 + 38.8 0.000 promoter-TSS (NR_148220) promoter-TSS (NR_148220) -16 NM_001352980 92106 Hs.655449 NM_138381 ENSG00000154814 OXNAD1 - oxidoreductase NAD binding domain containing 1 protein-coding chr10-152 chr10 70405475 70405685 + 38.8 0.000 intron (NM_004096, intron 1 of 2) intron (NM_004096, intron 1 of 2) 1435 NM_004096 1979 Hs.621200 NM_004096 ENSG00000148730 EIF4EBP2 4EBP2|PHASII eukaryotic translation initiation factor 4E binding protein 2 protein-coding chr19-407 chr19 57302087 57302297 + 38.8 0.000 Intergenic L1M2a|LINE|L1 -18280 NM_213598 125919 Hs.202544 NM_213598 ENSG00000178229 ZNF543 - zinc finger protein 543 protein-coding chr2-138 chr2 219498535 219498745 + 38.8 0.000 promoter-TSS (NM_013335) promoter-TSS (NM_013335) -251 NM_013335 29926 Hs.27059 NM_013335 ENSG00000144591 GMPPA AAMR GDP-mannose pyrophosphorylase A protein-coding chr12-141 chr12 56224161 56224371 + 38.8 0.000 promoter-TSS (NM_024068) promoter-TSS (NM_024068) -76 NM_024068 79035 Hs.240170 NM_024068 ENSG00000139579 NABP2 OBFC2B|SOSS-B1|SSB1|hSSB1 nucleic acid binding protein 2 protein-coding chr12-152 chr12 75511611 75511821 + 38.8 0.000 promoter-TSS (NM_007043) promoter-TSS (NM_007043) -107 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr2-441 chr2 159136064 159136274 + 38.8 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -50666 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr2-483 chr2 150272093 150272303 + 38.8 0.000 Intergenic Intergenic -15191 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr10-201 chr10 110871682 110871892 + 38.8 0.000 promoter-TSS (NR_026932) promoter-TSS (NR_026932) -8 NM_001199492 27250 Hs.711490 NM_014456 ENSG00000150593 PDCD4 H731 programmed cell death 4 protein-coding chr11-226 chr11 47553150 47553360 + 38.8 0.000 promoter-TSS (NM_006560) promoter-TSS (NM_006560) -123 NM_006560 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr10-314 chr10 51879341 51879551 + 38.8 0.000 intron (NM_001098512, intron 4 of 17) L2c|LINE|L2 -179851 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr1-283 chr1 21926819 21927029 + 38.8 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 10386 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr19-164 chr19 3557624 3557834 + 38.8 0.000 promoter-TSS (NM_174983) promoter-TSS (NM_174983) -143 NM_174983 126321 Hs.656901 NM_021731 ENSG00000161091 MFSD12 C19orf28|PP3501 major facilitator superfamily domain containing 12 protein-coding chrX-27 chrX 129982436 129982646 + 38.8 0.000 Intergenic CpG -22647 NM_001184772 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chrX-37 chrX 125577571 125577781 + 38.8 0.000 Intergenic L1MA3|LINE|L1 257805 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr3-128 chr3 123961283 123961493 + 38.8 0.000 promoter-TSS (NM_001308317) promoter-TSS (NM_001308317) -159 NM_001366337 64770 Hs.645028 NM_022757 ENSG00000175455 CCDC14 - coiled-coil domain containing 14 protein-coding chr2-125 chr2 203238946 203239156 + 38.8 0.000 5' UTR (NM_177538, exon 1 of 13) 5' UTR (NM_177538, exon 1 of 13) 610 NM_177538 57404 Hs.446065 NM_020674 ENSG00000119004 CYP20A1 CYP-M cytochrome P450 family 20 subfamily A member 1 protein-coding chr1-161 chr1 180631822 180632032 + 38.8 0.000 promoter-TSS (NM_001328662) promoter-TSS (NM_001328662) -95 NM_001135669 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding chr2-398 chr2 135055272 135055482 + 38.8 0.000 intron (NM_001172435, intron 2 of 24) intron (NM_001172435, intron 2 of 24) 3085 NM_012233 22930 Hs.306327 NM_012233 ENSG00000115839 RAB3GAP1 P130|RAB3GAP|RAB3GAP130|WARBM1 RAB3 GTPase activating protein catalytic subunit 1 protein-coding chr11-174 chr11 75143207 75143417 + 38.6 0.000 Intergenic Intergenic -7795 NM_001145212 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr7-270 chr7 47513870 47514080 + 38.6 0.000 intron (NM_022748, intron 2 of 30) intron (NM_022748, intron 2 of 30) -49172 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr2-399 chr2 207258682 207258892 + 38.6 0.000 Intergenic Intergenic -1658 NR_146973 105373852 Hs.516721 NR_146973 LINC01802 - long intergenic non-protein coding RNA 1802 ncRNA chr12-70 chr12 6336490 6336700 + 38.6 0.000 intron (NR_144351, intron 1 of 8) intron (NR_144351, intron 1 of 8) 5481 NM_001346091 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr12-96 chr12 52032981 52033191 + 38.6 0.000 intron (NM_001202233, intron 1 of 7) CpG -4629 NM_001202234 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr7-359 chr7 28685875 28686085 + 38.6 0.000 promoter-TSS (NM_001011666) promoter-TSS (NM_001011666) -153 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr2-335 chr2 207334771 207334981 + 38.6 0.000 Intergenic Intergenic -65452 NR_031633 100302130 NR_031633 ENSG00000221628 MIR1302-4 MIRN1302-4|hsa-mir-1302-4 microRNA 1302-4 ncRNA chr14-68 chr14 77098051 77098261 + 38.6 0.000 promoter-TSS (NM_033426) promoter-TSS (NM_033426) -102 NM_033426 85457 Hs.709066 NM_033426 ENSG00000198894 CIPC KIAA1737 CLOCK interacting pacemaker protein-coding chr14-201 chr14 74514447 74514657 + 38.6 0.000 intron (NM_000428, intron 18 of 35) intron (NM_000428, intron 18 of 35) 20787 NM_194279 122961 Hs.291079 NM_194279 ENSG00000165898 ISCA2 HBLD1|ISA2|MMDS4|c14_5557 iron-sulfur cluster assembly 2 protein-coding chr12-233 chr12 124321178 124321388 + 38.6 0.000 Intergenic MIRb|SINE|MIR 15959 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr10-164 chr10 7788015 7788225 + 38.6 0.000 promoter-TSS (NR_045609) promoter-TSS (NR_045609) 16 NM_005174 509 Hs.271135 NM_005174 ENSG00000165629 ATP5F1C ATP5C|ATP5C1|ATP5CL1 ATP synthase F1 subunit gamma protein-coding chr4-59 chr4 48341161 48341371 + 38.6 0.000 promoter-TSS (NM_020846) promoter-TSS (NM_020846) -263 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr19-237 chr19 42220178 42220388 + 38.6 0.000 promoter-TSS (NR_073047) promoter-TSS (NR_073047) -29 NM_133444 116115 Hs.137282 NM_133444 ENSG00000167625 ZNF526 - zinc finger protein 526 protein-coding chr2-145 chr2 58046579 58046789 + 38.6 0.000 promoter-TSS (NM_001288839) promoter-TSS (NM_001288839) -28 NM_001130481 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr12-112 chr12 56333904 56334114 + 38.6 0.000 promoter-TSS (NM_001127460) promoter-TSS (NM_001127460) -9 NM_014871 9924 Hs.273397 NM_014871 ENSG00000135473 PAN2 USP52 poly(A) specific ribonuclease subunit PAN2 protein-coding chr16-368 chr16 85204292 85204502 + 38.6 0.000 Intergenic L1MB7|LINE|L1 -3399 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr16-248 chr16 75377995 75378205 + 38.6 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) 55403 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr12-142 chr12 57487948 57488158 + 38.6 0.000 promoter-TSS (NM_004990) promoter-TSS (NM_004990) -15 NM_004990 4141 Hs.632707 NM_004990 ENSG00000166986 MARS CMT2U|ILFS2|ILLD|METRS|MRS|MTRNS|SPG70 methionyl-tRNA synthetase protein-coding chr5-42 chr5 159510384 159510594 + 38.6 0.000 Intergenic Intergenic -44213 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr5-133 chr5 55868990 55869200 + 38.6 0.000 intron (NM_001242636, intron 3 of 14) intron (NM_001242636, intron 3 of 14) 15773 NM_001242639 133396 Hs.55378 NM_139017 ENSG00000164509 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding chr16-261 chr16 67481206 67481416 + 38.6 0.000 promoter-TSS (NM_004691) promoter-TSS (NM_004691) -154 NM_004691 9114 Hs.106876 NM_004691 ENSG00000159720 ATP6V0D1 ATP6D|ATP6DV|P39|VATX|VMA6|VPATPD ATPase H+ transporting V0 subunit d1 protein-coding chr3-139 chr3 49719520 49719730 + 38.6 0.000 promoter-TSS (NM_198722) promoter-TSS (NM_198722) 59 NM_198722 386724 Hs.567903 NM_198722 ENSG00000176020 AMIGO3 ALI3|AMIGO-3 adhesion molecule with Ig like domain 3 protein-coding chr5-164 chr5 141509080 141509290 + 38.6 0.000 intron (NM_018923, intron 3 of 3) intron (NM_018923, intron 3 of 3) 19944 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr9-368 chr9 107020119 107020329 + 38.6 0.000 intron (NR_126029, intron 4 of 4) intron (NR_126029, intron 4 of 4) 82764 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr11-286 chr11 117178673 117178883 + 38.5 0.000 promoter-TSS (NM_001040455) promoter-TSS (NM_001040455) 35 NM_001040455 51092 Hs.712144 NM_015996 ENSG00000149577 SIDT2 CGI-40 SID1 transmembrane family member 2 protein-coding chr10-225 chr10 102743689 102743899 + 38.5 0.000 promoter-TSS (NM_001083913) promoter-TSS (NM_001083913) -154 NM_001083913 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr10-80 chr10 126973120 126973330 + 38.5 0.000 intron (NM_001290223, intron 2 of 51) intron (NM_001290223, intron 2 of 51) 67816 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr9-243 chr9 94995947 94996157 + 38.5 0.000 intron (NM_032823, intron 9 of 14) intron (NM_032823, intron 9 of 14) -50498 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr19-422 chr19 39540017 39540227 + 38.5 0.000 promoter-TSS (NM_153232) promoter-TSS (NM_153232) 39 NM_153232 163126 Hs.18949 NM_153232 ENSG00000176396 EID2 CRI2|EID-2 EP300 interacting inhibitor of differentiation 2 protein-coding chr12-218 chr12 52186180 52186390 + 38.5 0.000 intron (NM_182507, intron 1 of 8) intron (NM_182507, intron 1 of 8) 5729 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr17-303 chr17 19111869 19112079 + 38.5 0.000 TTS (NR_006882) TTS (NR_006882) 662 NR_006882 780854 NR_006882 ENSG00000281000 SNORD3D RNU3-4|U3-4 small nucleolar RNA, C/D box 3D snoRNA chr17-347 chr17 41530204 41530414 + 38.5 0.000 Intergenic Intergenic -2001 NM_002276 3880 Hs.654568 NM_002276 ENSG00000171345 KRT19 CK19|K19|K1CS keratin 19 protein-coding chr1-284 chr1 25430602 25430812 + 38.5 0.000 promoter-TSS (NM_001282564) promoter-TSS (NM_001282564) -151 NM_001282564 55219 Hs.189782 NM_018202 ENSG00000204178 MACO1 MACOILIN|TMEM57 macoilin 1 protein-coding chr17-348 chr17 77313266 77313476 + 38.5 0.000 intron (NM_001113491, intron 2 of 11) intron (NM_001113491, intron 2 of 11) -6144 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr2-383 chr2 47076921 47077131 + 38.5 0.000 TTS (NM_001288955) TTS (NM_001288955) 78282 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr12-144 chr12 133130265 133130475 + 38.5 0.000 promoter-TSS (NM_015394) promoter-TSS (NM_015394) 103 NM_001277291 101060200 Hs.614816 NM_001277291 ENSG00000214029 ZNF891 - zinc finger protein 891 protein-coding chr2-229 chr2 96665280 96665490 + 38.5 0.000 intron (NM_001293083, intron 14 of 52) intron (NM_001293083, intron 14 of 52) 22621 NM_001293083 90342 Hs.534025 NM_001077400 ENSG00000249715 FER1L5 - fer-1 like family member 5 protein-coding chr14-136 chr14 102799743 102799953 + 38.5 0.000 intron (NM_001199427, intron 1 of 7) intron (NM_001199427, intron 1 of 7) 22369 NM_145726 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr20-138 chr20 49345137 49345347 + 38.5 0.000 Intergenic Intergenic 64559 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr18-77 chr18 75489759 75489969 + 38.5 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -62161 NM_001037331 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr19-206 chr19 1275502 1275712 + 38.5 0.000 promoter-TSS (NM_017914) promoter-TSS (NM_017914) 77 NM_017914 55009 Hs.591383 NM_017914 ENSG00000228300 C19orf24 - chromosome 19 open reading frame 24 protein-coding chr8-245 chr8 57650691 57650901 + 38.5 0.000 Intergenic Intergenic -95353 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr19-384 chr19 3155130 3155340 + 38.5 0.000 promoter-TSS (NR_110670) promoter-TSS (NR_110670) -60 NR_110670 100996351 NR_110670 ENSG00000267551 LOC100996351 - uncharacterized LOC100996351 ncRNA chr10-304 chr10 43931338 43931548 + 38.5 0.000 intron (NR_033846, intron 2 of 7) L2a|LINE|L2 19041 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr17-135 chr17 58219246 58219456 + 38.5 0.000 promoter-TSS (NM_001330397) promoter-TSS (NM_001330397) -46 NM_017777 54903 Hs.408843 NM_017777 ENSG00000011143 MKS1 BBS13|JBTS28|MES|MKS|POC12 MKS transition zone complex subunit 1 protein-coding chr19-213 chr19 32675089 32675299 + 38.5 0.000 promoter-TSS (NM_032139) promoter-TSS (NM_032139) -14 NM_032139 84079 Hs.59236 NM_032139 ENSG00000105186 ANKRD27 PP12899|VARP ankyrin repeat domain 27 protein-coding chr11-288 chr11 113553328 113553538 + 38.5 0.000 Intergenic MIRb|SINE|MIR -78035 NM_000795 1813 Hs.73893 NM_000795 ENSG00000149295 DRD2 D2DR|D2R dopamine receptor D2 protein-coding chr18-99 chr18 23115766 23115976 + 38.5 0.000 Intergenic L1MB3|LINE|L1 -18693 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr2-171 chr2 217899528 217899738 + 38.5 0.000 TTS (NR_106867) TTS (NR_106867) 995 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr6-29 chr6 166999157 166999367 + 38.5 0.000 promoter-TSS (NM_194429) promoter-TSS (NM_194429) -55 NM_001278690 11116 Hs.487175 NM_007045 ENSG00000213066 FGFR1OP FOP FGFR1 oncogene partner protein-coding chr1-674 chr1 91650928 91651138 + 38.5 0.000 Intergenic Intergenic 149925 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr17-123 chr17 49192807 49193017 + 38.5 0.000 Intergenic CpG 16469 NM_031498 2793 Hs.181781 NM_031498 ENSG00000167083 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 G protein subunit gamma transducin 2 protein-coding chr2-557 chr2 17977238 17977448 + 38.5 0.000 Intergenic Intergenic 98676 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr10-132 chr10 37976605 37976815 + 38.4 0.000 promoter-TSS (NR_138068) promoter-TSS (NR_138068) -63 NM_001329659 219749 Hs.499429 NM_145011 ENSG00000175395 ZNF25 KOX19|Zfp9 zinc finger protein 25 protein-coding chr17-175 chr17 39953189 39953399 + 38.4 0.000 Intergenic CpG -9710 NM_178171 284110 Hs.448873 NM_178171 ENSG00000167914 GSDMA FKSG9|GSDM|GSDM1 gasdermin A protein-coding chr16-243 chr16 85162578 85162788 + 38.4 0.000 Intergenic Intergenic 25533 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr11-284 chr11 68038904 68039114 + 38.4 0.000 promoter-TSS (NM_006019) promoter-TSS (NM_006019) -16 NM_001351059 10312 Hs.495985 NM_006019 ENSG00000110719 TCIRG1 ATP6N1C|ATP6V0A3|Atp6i|OC-116kDa|OC116|OPTB1|Stv1|TIRC7|Vph1|a3 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 protein-coding chr17-242 chr17 57898989 57899199 + 38.4 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 4295 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr9-206 chr9 16213950 16214160 + 38.4 0.000 intron (NM_001364979, intron 3 of 3) intron (NM_001364979, intron 3 of 3) 39052 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr1-527 chr1 149986545 149986755 + 38.4 0.000 intron (NM_020205, intron 1 of 11) intron (NM_020205, intron 1 of 11) 24076 NM_020205 56957 Hs.98322 NM_020205 ENSG00000264522 OTUD7B CEZANNE|ZA20D1 OTU deubiquitinase 7B protein-coding chr16-292 chr16 27286566 27286776 + 38.4 0.000 non-coding (NR_037184, exon 3 of 5) non-coding (NR_037184, exon 3 of 5) -17899 NM_145080 197370 Hs.284295 NM_145080 ENSG00000169189 NSMCE1 NSE1 NSE1 homolog, SMC5-SMC6 complex component protein-coding chr2-248 chr2 210476688 210476898 + 38.4 0.000 promoter-TSS (NM_001136575) promoter-TSS (NM_001136575) -18 NM_001136575 10314 Hs.13351 NM_006055 ENSG00000115365 LANCL1 GPR69A|p40 LanC like 1 protein-coding chr8-102 chr8 100158418 100158628 + 38.4 0.000 5' UTR (NM_003114, exon 1 of 19) 5' UTR (NM_003114, exon 1 of 19) 188 NM_003114 6674 Hs.591866 NM_003114 ENSG00000104450 SPAG1 CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS sperm associated antigen 1 protein-coding chr9-322 chr9 88852869 88853079 + 38.4 0.000 Intergenic Intergenic -107069 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr4-57 chr4 82430315 82430525 + 38.4 0.000 promoter-TSS (NM_001292017) promoter-TSS (NM_001292017) -170 NM_001292017 58478 Hs.18442 NM_021204 ENSG00000145293 ENOPH1 E1|MASA|MST145|mtnC enolase-phosphatase 1 protein-coding chr10-259 chr10 72216124 72216334 + 38.4 0.000 promoter-TSS (NM_001198799) promoter-TSS (NM_001198799) 47 NM_001369087 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr16-163 chr16 67109653 67109863 + 38.4 0.000 promoter-TSS (NM_001320540) promoter-TSS (NM_001320540) -183 NM_001320540 80262 Hs.513666 NM_025187 ENSG00000125149 C16orf70 C16orf6|LIN10|lin-10 chromosome 16 open reading frame 70 protein-coding chr19-396 chr19 57746649 57746859 + 38.4 0.000 promoter-TSS (NR_145327) promoter-TSS (NR_145327) -61 NM_173632 284309 Hs.720254 NM_173632 ENSG00000152443 ZNF776 - zinc finger protein 776 protein-coding chr17-161 chr17 49515350 49515560 + 38.4 0.000 TTS (NM_002507) TTS (NM_002507) 4638 NR_106751 102465141 NR_106751 ENSG00000277478 MIR6165 hsa-mir-6165 microRNA 6165 ncRNA chr11-259 chr11 62591568 62591778 + 38.4 0.000 promoter-TSS (NM_001367906) promoter-TSS (NM_001367906) -150 NM_022830 64852 Hs.728983 NM_022830 ENSG00000149016 TUT1 PAPD2|RBM21|STARPAP|TENT1|TUTase|URLC6 terminal uridylyl transferase 1, U6 snRNA-specific protein-coding chr7-82 chr7 99472773 99472983 + 38.4 0.000 promoter-TSS (NM_213603) promoter-TSS (NM_213603) -12 NR_147002 285989 Hs.440384 NM_213603 ENSG00000198556 ZNF789 - zinc finger protein 789 protein-coding chr11-363 chr11 124800437 124800647 + 38.4 0.000 promoter-TSS (NM_001312919) promoter-TSS (NM_001312919) 114 NR_103862 100507283 Hs.564177 NR_103862 ENSG00000245498 LOC100507283 - uncharacterized LOC100507283 ncRNA chr7-237 chr7 151460117 151460327 + 38.3 0.000 Intergenic Intergenic -19409 NR_131779 155051 Hs.647104 NM_144727 ENSG00000127377 CRYGN - crystallin gamma N protein-coding chr7-161 chr7 47392434 47392644 + 38.3 0.000 intron (NM_022748, intron 16 of 30) intron (NM_022748, intron 16 of 30) 72264 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr4-98 chr4 127870921 127871131 + 38.3 0.000 Intergenic L2a|LINE|L2 -9867 NM_001190799 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding chr11-330 chr11 124876459 124876669 + 38.3 0.000 promoter-TSS (NM_001370359) promoter-TSS (NM_001370359) -250 NM_001370357 64221 Hs.435621 NM_022370 ENSG00000154134 ROBO3 HGPPS|HGPPS1|HGPS|RBIG1|RIG1 roundabout guidance receptor 3 protein-coding chrX-35 chrX 123765038 123765248 + 38.3 0.000 Intergenic Intergenic -32091 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr19-319 chr19 1507928 1508138 + 38.3 0.000 exon (NM_213604, exon 7 of 12) exon (NM_213604, exon 7 of 12) 4986 NM_001367197 339366 Hs.371674 NM_213604 ENSG00000185761 ADAMTSL5 THSD6 ADAMTS like 5 protein-coding chr5-191 chr5 150036593 150036803 + 38.3 0.000 exon (NM_001366501, exon 11 of 19) exon (NM_001366501, exon 11 of 19) 35959 NM_001366501 22993 Hs.719189 NM_014983 ENSG00000113716 HMGXB3 HMGX3|SMF HMG-box containing 3 protein-coding chr8-86 chr8 103415160 103415370 + 38.3 0.000 promoter-TSS (NM_030780) promoter-TSS (NM_030780) 70 NR_102337 81034 Hs.532265 NM_030780 ENSG00000164933 SLC25A32 MFT|MFTC|RREI solute carrier family 25 member 32 protein-coding chr2-102 chr2 241150348 241150558 + 38.3 0.000 promoter-TSS (NM_001252120) promoter-TSS (NM_001252120) -14 NM_002712 5510 Hs.36587 NM_002712 ENSG00000115685 PPP1R7 SDS22 protein phosphatase 1 regulatory subunit 7 protein-coding chr7-175 chr7 135170581 135170791 + 38.3 0.000 promoter-TSS (NM_001363329) promoter-TSS (NM_001363329) 21 NM_001363329 78996 Hs.643113 NM_024033 ENSG00000122783 CYREN C7orf49|MRI|MRI-2 cell cycle regulator of NHEJ protein-coding chr13-98 chr13 39528158 39528368 + 38.3 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 74930 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr10-112 chr10 124461827 124462037 + 38.3 0.000 exon (NM_001167880, exon 1 of 6) exon (NM_001167880, exon 1 of 6) 109 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr11-332 chr11 12411866 12412076 + 38.3 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 34400 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr5-198 chr5 115941168 115941378 + 38.3 0.000 Intergenic Intergenic -15298 NR_157226 107986443 NR_157226 LINCADL LINC-ADAL lincRNA adipogenesis and lipogenesis associated ncRNA chr9-200 chr9 69180711 69180921 + 38.3 0.000 intron (NM_001369872, intron 1 of 21) intron (NM_001369872, intron 1 of 21) 6539 NM_001369873 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr15-83 chr15 89662962 89663172 + 38.3 0.000 Intergenic Intergenic -7600 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chr16-127 chr16 88634702 88634912 + 38.3 0.000 Intergenic CpG -3765 NM_013278 27189 Hs.278911 NM_013278 ENSG00000124391 IL17C CX2|IL-17C interleukin 17C protein-coding chr3-209 chr3 124780412 124780622 + 38.3 0.000 intron (NM_001354766, intron 9 of 13) intron (NM_001354766, intron 9 of 13) 48078 NR_036088 100422864 NR_036088 ENSG00000265981 MIR544B - microRNA 544b ncRNA chr19-232 chr19 45001924 45002134 + 38.3 0.000 intron (NM_006509, intron 1 of 10) CpG 565 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr11-282 chr11 36149864 36150074 + 38.3 0.000 intron (NM_001304263, intron 3 of 4) intron (NM_001304263, intron 3 of 4) -72068 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr19-359 chr19 57389608 57389818 + 38.3 0.000 promoter-TSS (NM_152909) promoter-TSS (NM_152909) -137 NM_152909 147694 Hs.126905 NM_152909 ENSG00000188785 ZNF548 - zinc finger protein 548 protein-coding chr6-65 chr6 42563834 42564044 + 38.3 0.000 promoter-TSS (NM_001184801) promoter-TSS (NM_001184801) -83 NM_015255 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding chr4-78 chr4 24795375 24795585 + 38.2 0.000 promoter-TSS (NM_003102) promoter-TSS (NM_003102) -93 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr3-290 chr3 120742509 120742719 + 38.2 0.000 promoter-TSS (NM_001363965) promoter-TSS (NM_001363965) 66 NM_173825 285282 Hs.444360 NM_173825 ENSG00000144840 RABL3 - RAB, member of RAS oncogene family like 3 protein-coding chr20-27 chr20 34677060 34677270 + 38.2 0.000 5' UTR (NM_080476, exon 1 of 12) 5' UTR (NM_080476, exon 1 of 12) 120 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr19-612 chr19 37210563 37210773 + 38.2 0.000 promoter-TSS (NM_152279) promoter-TSS (NM_152279) -132 NM_152279 92285 Hs.390568 NM_152279 ENSG00000245680 ZNF585B SZFP41 zinc finger protein 585B protein-coding chr22-144 chr22 38794056 38794266 + 38.2 0.000 promoter-TSS (NM_005740) promoter-TSS (NM_005740) -18 NM_005740 10126 Hs.632766 NM_005740 ENSG00000100246 DNAL4 MRMV3|PIG27 dynein axonemal light chain 4 protein-coding chr1-251 chr1 53526733 53526943 + 38.2 0.000 intron (NM_147193, intron 4 of 9) intron (NM_147193, intron 4 of 9) 67439 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr19-421 chr19 38335669 38335879 + 38.2 0.000 promoter-TSS (NM_021185) promoter-TSS (NM_021185) -56 NM_001330496 57828 Hs.324335 NM_021185 ENSG00000099338 CATSPERG C19orf15 cation channel sperm associated auxiliary subunit gamma protein-coding chr3-160 chr3 124887325 124887535 + 38.2 0.000 promoter-TSS (NM_002213) promoter-TSS (NM_002213) -65 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr8-35 chr8 133571838 133572048 + 38.2 0.000 promoter-TSS (NM_173344) promoter-TSS (NM_173344) -56 NM_003033 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr11-228 chr11 71999603 71999813 + 38.2 0.000 promoter-TSS (NM_001145057) promoter-TSS (NM_001145057) 91 NM_001145057 10068 Hs.591967 NM_005699 ENSG00000137496 IL18BP IL18BPa interleukin 18 binding protein protein-coding chr6-138 chr6 163457894 163458104 + 38.2 0.000 intron (NM_206853, intron 2 of 6) L2a|LINE|L2 43281 NM_006775 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr11-514 chr11 12814873 12815083 + 38.2 0.000 intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 140557 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr22-44 chr22 50474979 50475189 + 38.2 0.000 promoter-TSS (NM_002972) promoter-TSS (NM_002972) -49 NM_001365819 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr9-97 chr9 130200254 130200464 + 38.2 0.000 promoter-TSS (NM_001128826) promoter-TSS (NM_001128826) -41 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr3-181 chr3 58560821 58561031 + 38.2 0.000 Intergenic Intergenic 16465 NM_001076778 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr1-375 chr1 153967524 153967734 + 38.2 0.000 promoter-TSS (NM_001255979) promoter-TSS (NM_001255979) 96 NM_014437 27173 Hs.7854 NM_014437 ENSG00000143570 SLC39A1 ZIP1|ZIRTL solute carrier family 39 member 1 protein-coding chr18-89 chr18 69795899 69796109 + 38.2 0.000 intron (NM_152721, intron 7 of 7) intron (NM_152721, intron 7 of 7) 151869 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr3-184 chr3 49104629 49104839 + 38.2 0.000 promoter-TSS (NM_001272073) promoter-TSS (NM_001272073) 23 NM_001272073 5859 Hs.79322 NM_005051 ENSG00000172053 QARS GLNRS|MSCCA|PRO2195 glutaminyl-tRNA synthetase protein-coding chr17-97 chr17 32444352 32444562 + 38.2 0.000 promoter-TSS (NM_001270482) promoter-TSS (NM_001270482) -53 NM_001270482 5717 Hs.443379 NM_002815 ENSG00000108671 PSMD11 Rpn6|S9|p44.5 proteasome 26S subunit, non-ATPase 11 protein-coding chr2-193 chr2 231365167 231365377 + 38.2 0.000 intron (NM_001352754, intron 23 of 24) intron (NM_001352754, intron 23 of 24) 2564 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr13-57 chr13 110396954 110397164 + 38.2 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 56101 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr6-276 chr6 150882291 150882501 + 38.2 0.000 intron (NM_001350486, intron 4 of 27) intron (NM_001350486, intron 4 of 27) 15910 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr13-72 chr13 30617598 30617808 + 38.2 0.000 promoter-TSS (NM_001321532) promoter-TSS (NM_001321532) -106 NM_001313893 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr19-175 chr19 50724849 50725059 + 38.2 0.000 intron (NM_002975, intron 3 of 3) CpG-15011 1590 NM_002975 6320 Hs.512680 NM_002975 ENSG00000105472 CLEC11A CLECSF3|LSLCL|P47|SCGF C-type lectin domain containing 11A protein-coding chr17-510 chr17 78000192 78000402 + 38.2 0.000 Intergenic Intergenic -3940 NM_018996 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr14-109 chr14 67360047 67360257 + 38.2 0.000 promoter-TSS (NM_004094) promoter-TSS (NM_004094) -176 NM_004094 1965 Hs.151777 NM_004094 ENSG00000134001 EIF2S1 EIF-2|EIF-2A|EIF-2alpha|EIF2|EIF2A eukaryotic translation initiation factor 2 subunit alpha protein-coding chr9-54 chr9 135961234 135961444 + 38.2 0.000 promoter-TSS (NM_016172) promoter-TSS (NM_016172) 34 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr19-428 chr19 11987545 11987755 + 38.2 0.000 promoter-TSS (NR_134930) promoter-TSS (NR_134930) 33 NR_134929 101928464 Hs.631643 NR_134927 ENSG00000219665 ZNF433-AS1 - ZNF433 and ZNF878 antisense RNA 1 ncRNA chr19-451 chr19 36528346 36528556 + 38.2 0.000 promoter-TSS (NM_001166037) promoter-TSS (NM_001166037) -180 NM_001166037 339324 Hs.18103 NM_001012756 ENSG00000254004 ZNF260 OZRF1|PEX1|ZFP260 zinc finger protein 260 protein-coding chr3-85 chr3 184299014 184299224 + 38.1 0.000 promoter-TSS (NM_002808) promoter-TSS (NM_002808) -122 NM_002808 5708 Hs.518464 NM_002808 ENSG00000175166 PSMD2 P97|RPN1|S2|TRAP2 proteasome 26S subunit, non-ATPase 2 protein-coding chr10-176 chr10 50605288 50605498 + 38.1 0.000 intron (NM_147156, intron 1 of 10) intron (NM_147156, intron 1 of 10) 18563 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr10-469 chr10 36349804 36350014 + 38.1 0.000 Intergenic Intergenic 571607 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr10-234 chr10 14173715 14173925 + 38.1 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 99536 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr7-274 chr7 44241158 44241368 + 38.1 0.000 intron (NM_172081, intron 11 of 18) intron (NM_172081, intron 11 of 18) 40285 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr16-180 chr16 75305404 75305614 + 38.1 0.000 intron (NM_006324, intron 5 of 6) MIR|SINE|MIR -37502 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr16-141 chr16 53091010 53091220 + 38.1 0.000 intron (NM_025134, intron 1 of 38) intron (NM_025134, intron 1 of 38) 36124 NM_025134 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr3-365 chr3 31634551 31634761 + 38.1 0.000 intron (NM_178862, intron 15 of 15) intron (NM_178862, intron 15 of 15) -69557 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA chr13-61 chr13 20943594 20943804 + 38.1 0.000 intron (NR_104058, intron 2 of 5) intron (NR_104058, intron 2 of 5) 5729 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr2-165 chr2 24076309 24076519 + 38.1 0.000 promoter-TSS (NM_001291328) promoter-TSS (NM_001291328) -88 NM_016047 51639 Hs.177861 NM_016047 ENSG00000115128 SF3B6 CGI-110|HSPC175|Ht006|P14|SAP14|SAP14a|SF3B14|SF3B14a splicing factor 3b subunit 6 protein-coding chr9-208 chr9 114387868 114388078 + 38.1 0.000 promoter-TSS (NM_001317950) promoter-TSS (NM_001317950) 9 NM_001317950 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding chr16-194 chr16 88304329 88304539 + 38.1 0.000 Intergenic Intergenic 110153 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr17-291 chr17 77323097 77323307 + 38.1 0.000 intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) 3687 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr16-227 chr16 29961773 29961983 + 38.1 0.000 promoter-TSS (NM_001083613) promoter-TSS (NM_001083613) -201 NM_001369689 124446 Hs.460574 NM_194280 ENSG00000149932 TMEM219 IGFBP-3R transmembrane protein 219 protein-coding chr17-107 chr17 17823764 17823974 + 38.1 0.000 promoter-TSS (NM_001321096) promoter-TSS (NM_001321096) -239 NM_001321096 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr9-107 chr9 136336019 136336229 + 38.1 0.000 intron (NM_015597, intron 3 of 8) intron (NM_015597, intron 3 of 8) 8585 NM_015597 26086 Hs.239370 NM_015597 ENSG00000160360 GPSM1 AGS3 G protein signaling modulator 1 protein-coding chr16-196 chr16 4293959 4294169 + 38.1 0.000 Intergenic Intergenic -20697 NM_001318918 84662 Hs.592087 NM_032575 ENSG00000126603 GLIS2 NKL|NPHP7 GLIS family zinc finger 2 protein-coding chr13-49 chr13 67230384 67230594 + 38.1 0.000 promoter-TSS (NM_203487) promoter-TSS (NM_203487) -153 NM_020403 5101 Hs.654709 NM_020403 ENSG00000184226 PCDH9 - protocadherin 9 protein-coding chr20-76 chr20 46089729 46089939 + 38.1 0.000 5' UTR (NM_001348151, exon 1 of 7) 5' UTR (NM_001348151, exon 1 of 7) 128 NM_001348151 57727 Hs.654991 NM_020967 ENSG00000124160 NCOA5 CIA|bA465L10.6 nuclear receptor coactivator 5 protein-coding chr6-106 chr6 73388956 73389166 + 38.1 0.000 Intergenic Intergenic -5767 NM_018665 55510 Hs.125507 NM_018665 ENSG00000080007 DDX43 CT13|HAGE DEAD-box helicase 43 protein-coding chr11-316 chr11 17077813 17078023 + 38.1 0.000 promoter-TSS (NM_001017) promoter-TSS (NM_001017) -251 NM_001017 6207 Hs.446588 NM_001017 ENSG00000110700 RPS13 S13 ribosomal protein S13 protein-coding chr4-137 chr4 105280510 105280720 + 38.1 0.000 TTS (NM_001127208) TTS (NM_001127208) 72266 NR_126420 104384744 Hs.624109 NR_126420 TET2-AS1 - TET2 antisense RNA 1 ncRNA chr4-152 chr4 53119605 53119815 + 38.1 0.000 intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 246351 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr17-508 chr17 43701372 43701582 + 38.1 0.000 Intergenic Intergenic -39555 NM_001040002 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr10-251 chr10 114856678 114856888 + 38.1 0.000 intron (NM_001135051, intron 14 of 16) MIRc|SINE|MIR 35003 NM_020940 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding chr17-280 chr17 75779799 75780009 + 38.1 0.000 promoter-TSS (NM_005324) promoter-TSS (NM_005324) -125 NM_005324 3021 Hs.180877 NM_005324 ENSG00000132475 H3F3B H3.3B H3 histone family member 3B protein-coding chr5-119 chr5 150409899 150410109 + 38.1 0.000 intron (NR_157074, intron 1 of 6) intron (NR_157074, intron 1 of 6) 2752 NM_001364084 972 Hs.436568 NM_004355 ENSG00000019582 CD74 DHLAG|HLADG|II|Ia-GAMMA|p33 CD74 molecule protein-coding chr16-192 chr16 2236463 2236673 + 38.1 0.000 TTS (NM_004424) TTS (NM_004424) 124 NM_001374 1775 Hs.103503 NM_001374 ENSG00000167968 DNASE1L2 DNAS1L2 deoxyribonuclease 1 like 2 protein-coding chr19-486 chr19 57527218 57527428 + 38.1 0.000 promoter-TSS (NM_153263) promoter-TSS (NM_153263) -2 NM_153263 256051 Hs.744289 NM_153263 ENSG00000121406 ZNF549 - zinc finger protein 549 protein-coding chr10-114 chr10 79151808 79152018 + 38.1 0.000 intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 82947 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr14-84 chr14 104815768 104815978 + 37.9 0.000 Intergenic CpG -5328 NR_024396 196872 Hs.352220 NR_024396 ENSG00000258701 LINC00638 - long intergenic non-protein coding RNA 638 ncRNA chr22-287 chr22 44360792 44361002 + 37.9 0.000 Intergenic Intergenic -47946 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr6-73 chr6 158999901 159000111 + 37.9 0.000 non-coding (NR_144434, exon 1 of 9) non-coding (NR_144434, exon 1 of 9) 181 NR_144434 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke head 3 protein-coding chr12-165 chr12 124545554 124545764 + 37.9 0.000 intron (NM_001077261, intron 1 of 47) intron (NM_001077261, intron 1 of 47) 21953 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr8-70 chr8 127969536 127969746 + 37.9 0.000 intron (NR_003367, intron 3 of 8) intron (NR_003367, intron 3 of 8) 9008 NR_031610 100302161 NR_031610 ENSG00000221771 MIR1205 MIRN1205|hsa-mir-1205 microRNA 1205 ncRNA chr11-366 chr11 20112393 20112603 + 37.9 0.000 intron (NM_182964, intron 36 of 37) intron (NM_182964, intron 36 of 37) 47977 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr3-155 chr3 42600389 42600599 + 37.9 0.000 promoter-TSS (NM_001349124) promoter-TSS (NM_001349124) -192 NM_005385 4820 Hs.529509 NM_005385 ENSG00000114857 NKTR p104 natural killer cell triggering receptor protein-coding chr6-142 chr6 89638544 89638754 + 37.9 0.000 promoter-TSS (NM_020466) promoter-TSS (NM_020466) 98 NM_020466 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chr6-248 chr6 37457214 37457424 + 37.9 0.000 intron (NM_015050, intron 8 of 23) intron (NM_015050, intron 8 of 23) 24098 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr3-431 chr3 87855705 87855915 + 37.9 0.000 intron (NM_001322210, intron 2 of 2) Tigger7|DNA|TcMar-Tigger 63104 NM_001322209 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr17-300 chr17 68909165 68909375 + 37.9 0.000 intron (NM_001288985, intron 17 of 39) MER58A|DNA|hAT-Charlie 46122 NM_007168 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr11-266 chr11 65013641 65013851 + 37.9 0.000 promoter-TSS (NR_037650) promoter-TSS (NR_037650) -367 NR_037650 100528018 Hs.80132 NR_037650 ENSG00000273003 ARL2-SNX15 - ARL2-SNX15 readthrough (NMD candidate) ncRNA chr19-154 chr19 8413040 8413250 + 37.9 0.000 promoter-TSS (NM_001369778) promoter-TSS (NM_001369778) -158 NM_001005415 51257 Hs.631861 NM_016496 ENSG00000099785 MARCH2 HSPC240|MARCH-II|RNF172 membrane associated ring-CH-type finger 2 protein-coding chr2-251 chr2 55050478 55050688 + 37.9 0.000 promoter-TSS (NM_153828) promoter-TSS (NM_153828) 15 NM_001321860 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr1-366 chr1 64161412 64161622 + 37.9 0.000 intron (NM_005012, intron 8 of 8) intron (NM_005012, intron 8 of 8) -42106 NM_001366235 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding chr5-239 chr5 169977208 169977418 + 37.9 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 3182 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr11-339 chr11 308007 308217 + 37.9 0.000 promoter-TSS (NM_006435) promoter-TSS (NM_006435) 5 NM_006435 10581 Hs.709321 NM_006435 ENSG00000185201 IFITM2 1-8D|DSPA2c interferon induced transmembrane protein 2 protein-coding chr1-113 chr1 2205266 2205476 + 37.9 0.000 intron (NM_001282670, intron 2 of 7) CpG 2362 NM_001146310 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr5-116 chr5 892621 892831 + 37.9 0.000 promoter-TSS (NR_134296) promoter-TSS (NR_134296) 75 NM_001317951 65980 Hs.449278 NM_023924 ENSG00000028310 BRD9 LAVS3040|PRO9856 bromodomain containing 9 protein-coding chr10-88 chr10 97426094 97426304 + 37.9 0.000 promoter-TSS (NM_002629) promoter-TSS (NM_002629) 8 NM_002629 5223 Hs.632918 NM_002629 ENSG00000171314 PGAM1 HEL-S-35|PGAM-B|PGAMA phosphoglycerate mutase 1 protein-coding chr18-20 chr18 74292022 74292232 + 37.9 0.000 promoter-TSS (NM_001914) promoter-TSS (NM_001914) -164 NM_148923 1528 Hs.465413 NM_001914 ENSG00000166347 CYB5A CYB5|MCB5|METAG cytochrome b5 type A protein-coding chr12-197 chr12 26299227 26299437 + 37.9 0.000 Intergenic Intergenic 103759 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr8-143 chr8 70315715 70315925 + 37.9 0.000 intron (NM_001321703, intron 1 of 22) intron (NM_001321703, intron 1 of 22) 87570 NM_001321712 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr19-322 chr19 8444753 8444963 + 37.8 0.000 promoter-TSS (NM_031203) promoter-TSS (NM_031203) -117 NM_005968 4670 Hs.465808 NM_005968 ENSG00000099783 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding chr11-161 chr11 9573229 9573439 + 37.8 0.000 promoter-TSS (NM_003390) promoter-TSS (NM_003390) -336 NM_003390 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr2-353 chr2 238288802 238289012 + 37.8 0.000 promoter-TSS (NM_022817) promoter-TSS (NM_022817) -297 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr2-156 chr2 190319775 190319985 + 37.8 0.000 promoter-TSS (NM_014362) promoter-TSS (NM_014362) -54 NM_014362 26275 Hs.656685 NM_014362 ENSG00000198130 HIBCH HIBYLCOAH 3-hydroxyisobutyryl-CoA hydrolase protein-coding chr22-107 chr22 29767065 29767275 + 37.8 0.000 promoter-TSS (NM_001003692) promoter-TSS (NM_001003692) -159 NM_001318129 55954 Hs.713647 NM_019103 ENSG00000100319 ZMAT5 SNRNP20|U11/U12-20K|ZC3H19 zinc finger matrin-type 5 protein-coding chr16-124 chr16 23641297 23641507 + 37.8 0.000 promoter-TSS (NM_024675) promoter-TSS (NM_024675) -45 NM_024675 79728 Hs.444664 NM_024675 ENSG00000083093 PALB2 FANCN|PNCA3 partner and localizer of BRCA2 protein-coding chr14-159 chr14 41605162 41605372 + 37.8 0.000 Intergenic Intergenic -1589 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr22-94 chr22 24593064 24593274 + 37.8 0.000 promoter-TSS (NM_207644) promoter-TSS (NM_207644) -96 NM_207644 388886 Hs.113314 NM_207644 ENSG00000178026 LRRC75B C22orf36|FAM211B leucine rich repeat containing 75B protein-coding chr12-162 chr12 132887684 132887894 + 37.8 0.000 promoter-TSS (NM_001161347) promoter-TSS (NM_001161347) -53 NR_110919 101928530 Hs.560003 NR_110919 ENSG00000236617 LOC101928530 - uncharacterized LOC101928530 ncRNA chr1-254 chr1 25239879 25240089 + 37.8 0.000 Intergenic CpG 7470 NM_020317 57035 Hs.259412 NM_020317 ENSG00000117616 RSRP1 C1orf63|NPD014 arginine and serine rich protein 1 protein-coding chr2-510 chr2 36389329 36389539 + 37.8 0.000 intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 33656 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr9-182 chr9 134775662 134775872 + 37.8 0.000 intron (NM_001278074, intron 27 of 65) intron (NM_001278074, intron 27 of 65) 73602 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr3-192 chr3 179037416 179037626 + 37.8 0.000 intron (NM_152240, intron 3 of 6) LTR27E|LTR|ERV1 34288 NM_152240 64393 Hs.371609 NM_022470 ENSG00000172667 ZMAT3 PAG608|WIG-1|WIG1 zinc finger matrin-type 3 protein-coding chr1-206 chr1 46132914 46133124 + 37.8 0.000 promoter-TSS (NM_001328653) promoter-TSS (NM_001328653) 17 NM_001114172 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr19-352 chr19 572253 572463 + 37.8 0.000 promoter-TSS (NM_001728) promoter-TSS (NM_001728) -238 NM_198589 682 Hs.501293 NM_001728 ENSG00000172270 BSG 5F7|CD147|EMMPRIN|EMPRIN|OK|SLC7A11|TCSF basigin (Ok blood group) protein-coding chr1-622 chr1 238589998 238590208 + 37.8 0.000 Intergenic MamGypLTR1b|LTR|Gypsy -104086 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr7-97 chr7 150379124 150379334 + 37.8 0.000 promoter-TSS (NM_173680) promoter-TSS (NM_173680) -101 NM_173680 285971 Hs.655734 NM_173680 ENSG00000196456 ZNF775 - zinc finger protein 775 protein-coding KI270733.1-8 KI270733.1 150142 150352 + 37.8 0.000 NA NA NA NA chr1-590 chr1 147757755 147757965 + 37.8 0.000 3' UTR (NM_005266, exon 2 of 2) 3' UTR (NM_005266, exon 2 of 2) 2742 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chr8-113 chr8 133486321 133486531 + 37.7 0.000 intron (NM_003033, intron 3 of 8) intron (NM_003033, intron 3 of 8) 85461 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr1-231 chr1 35079352 35079562 + 37.7 0.000 promoter-TSS (NM_001289089) promoter-TSS (NM_001289089) 72 NM_024772 79830 Hs.471243 NM_024772 ENSG00000197056 ZMYM1 MYM zinc finger MYM-type containing 1 protein-coding chr12-188 chr12 113184803 113185013 + 37.7 0.000 promoter-TSS (NM_001286215) promoter-TSS (NM_001286215) 570 NM_024072 79039 Hs.506861 NM_024072 ENSG00000123064 DDX54 DP97 DEAD-box helicase 54 protein-coding chr14-90 chr14 35046271 35046481 + 37.7 0.000 5' UTR (NM_001289022, exon 1 of 6) 5' UTR (NM_001289022, exon 1 of 6) 132 NM_001289022 283635 Hs.446357 NM_173607 ENSG00000151327 FAM177A1 C14orf24 family with sequence similarity 177 member A1 protein-coding chr5-128 chr5 150497671 150497881 + 37.7 0.000 promoter-TSS (NM_001301063) promoter-TSS (NM_001301063) -3 NM_001301063 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr1-274 chr1 247078695 247078905 + 37.7 0.000 promoter-TSS (NM_001204220) promoter-TSS (NM_001204220) 11 NM_001204220 93474 Hs.732305 NM_033213 ENSG00000277462 ZNF670 - zinc finger protein 670 protein-coding chr8-211 chr8 28609120 28609330 + 37.7 0.000 Intergenic L2a|LINE|L2 92239 NR_126027 101929402 Hs.667366 NR_126027 ENSG00000246339 EXTL3-AS1 C8orf50 EXTL3 antisense RNA 1 ncRNA chr20-64 chr20 25696765 25696975 + 37.7 0.000 promoter-TSS (NM_015655) promoter-TSS (NM_015655) -17 NM_015655 26152 Hs.61881 NM_015655 ENSG00000130684 ZNF337 - zinc finger protein 337 protein-coding chr16-195 chr16 622354 622564 + 37.7 0.000 intron (NM_021168, intron 3 of 5) CpG -8526 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr8-108 chr8 122721747 122721957 + 37.7 0.000 Intergenic Intergenic -27746 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr16-188 chr16 67667947 67668157 + 37.7 0.000 exon (NM_001012984, exon 3 of 4) exon (NM_001012984, exon 3 of 4) 1238 NM_001012984 388284 Hs.632208 NM_001012984 ENSG00000159761 C16orf86 - chromosome 16 open reading frame 86 protein-coding chr9-133 chr9 137188780 137188990 + 37.7 0.000 promoter-TSS (NM_013366) promoter-TSS (NM_013366) 209 NM_003731 8636 Hs.530314 NM_003731 ENSG00000176101 SSNA1 N14|NA-14|NA14 SS nuclear autoantigen 1 protein-coding chr1-629 chr1 33431058 33431268 + 37.7 0.000 Intergenic CpG -41482 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr2-39 chr2 219388291 219388501 + 37.7 0.000 promoter-TSS (NR_134970) promoter-TSS (NR_134970) 480 NM_001319121 23549 Hs.258551 NM_012100 ENSG00000123992 DNPEP ASPEP|DAP aspartyl aminopeptidase protein-coding chr14-174 chr14 103607149 103607359 + 37.7 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -21934 NM_005552 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr1-364 chr1 16181867 16182077 + 37.7 0.000 Intergenic Intergenic -25903 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr14-87 chr14 102139772 102139982 + 37.7 0.000 promoter-TSS (NR_148510) promoter-TSS (NR_148510) -20 NM_001353663 91833 Hs.36859 NM_144574 ENSG00000140153 WDR20 DMR WD repeat domain 20 protein-coding chr17-265 chr17 40486044 40486254 + 37.7 0.000 intron (NM_032865, intron 4 of 12) intron (NM_032865, intron 4 of 12) 15474 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr10-98 chr10 119725770 119725980 + 37.7 0.000 promoter-TSS (NM_001243195) promoter-TSS (NM_001243195) -172 NM_001243195 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr16-116 chr16 88737475 88737685 + 37.7 0.000 exon (NM_001142864, exon 10 of 51) exon (NM_001142864, exon 10 of 51) -5187 NR_120387 339059 Hs.449817 NR_120387 ENSG00000182376 LOC339059 - uncharacterized LOC339059 ncRNA chr12-181 chr12 120291558 120291768 + 37.6 0.000 TTS (NR_003137) TTS (NR_003137) 240 NR_003137 26834 NR_003137 ENSG00000202538 RNU4-2 RNU4-1B|RNU4B1|RNU4C|U4A|U4b|U4c RNA, U4 small nuclear 2 snRNA chr12-163 chr12 13206290 13206500 + 37.6 0.000 intron (NM_001423, intron 1 of 4) intron (NM_001423, intron 1 of 4) 9669 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr1-616 chr1 68384486 68384696 + 37.6 0.000 Intergenic Intergenic 65363 NM_000329 6121 Hs.2133 NM_000329 ENSG00000116745 RPE65 BCO3|LCA2|RP20|mRPE65|p63|rd12|sRPE65 retinoid isomerohydrolase RPE65 protein-coding chr19-357 chr19 47274405 47274615 + 37.6 0.000 promoter-TSS (NR_037675) promoter-TSS (NR_037675) 87 NR_037675 255783 Hs.128690 NM_178511 ENSG00000257704 INAFM1 PRR24 InaF motif containing 1 protein-coding chr2-385 chr2 112584610 112584820 + 37.6 0.000 promoter-TSS (NM_001304354) promoter-TSS (NM_001304354) 106 NM_001371323 chr10-205 chr10 17673874 17674084 + 37.6 0.000 intron (NM_001324284, intron 3 of 14) intron (NM_001324284, intron 3 of 14) 29828 NM_001324282 8027 Hs.335391 NM_003473 ENSG00000136738 STAM STAM-1|STAM1 signal transducing adaptor molecule protein-coding chr2-246 chr2 64144473 64144683 + 37.6 0.000 promoter-TSS (NM_020651) promoter-TSS (NM_020651) -158 NM_020651 57162 Hs.7886 NM_020651 ENSG00000197329 PELI1 - pellino E3 ubiquitin protein ligase 1 protein-coding chr16-115 chr16 970883 971093 + 37.6 0.000 promoter-TSS (NM_001352021) promoter-TSS (NM_001352021) -4 NR_147885 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr17-377 chr17 78384061 78384271 + 37.6 0.000 intron (NR_111989, intron 1 of 8) intron (NR_111989, intron 1 of 8) 5517 NR_110601 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr10-84 chr10 100912721 100912931 + 37.6 0.000 promoter-TSS (NM_001136123) promoter-TSS (NM_001136123) -137 NM_001136123 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr20-50 chr20 13638850 13639060 + 37.5 0.000 promoter-TSS (NM_001323604) promoter-TSS (NM_001323604) -19 NR_136631 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr11-203 chr11 30322997 30323207 + 37.5 0.000 promoter-TSS (NM_152316) promoter-TSS (NM_152316) -2 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr7-316 chr7 130845814 130846024 + 37.5 0.000 Intergenic Intergenic 30891 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr13-76 chr13 23321430 23321640 + 37.5 0.000 intron (NM_000231, intron 7 of 7) MER44B|DNA|TcMar-Tigger 53973 NM_001278055 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr9-116 chr9 127122667 127122877 + 37.5 0.000 promoter-TSS (NM_012098) promoter-TSS (NM_012098) -137 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr8-96 chr8 142952128 142952338 + 37.5 0.000 Intergenic Intergenic -34390 NM_000498 1585 Hs.632054 NM_000498 ENSG00000179142 CYP11B2 ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo cytochrome P450 family 11 subfamily B member 2 protein-coding chr10-95 chr10 132987763 132987973 + 37.5 0.000 Intergenic Intergenic 22334 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA chr13-97 chr13 32969715 32969925 + 37.5 0.000 Intergenic Intergenic -46603 NM_004795 9365 Hs.524953 NM_004795 ENSG00000133116 KL HFTC3 klotho protein-coding chr19-377 chr19 57849686 57849896 + 37.5 0.000 promoter-TSS (NM_032828) promoter-TSS (NM_032828) -68 NM_001204817 84914 Hs.642598 NM_032828 ENSG00000198466 ZNF587 ZF6 zinc finger protein 587 protein-coding chr9-108 chr9 130693576 130693786 + 37.5 0.000 promoter-TSS (NM_014285) promoter-TSS (NM_014285) -79 NM_001282708 23404 Hs.654643 NM_014285 ENSG00000130713 EXOSC2 RRP4|Rrp4p|SHRF|hRrp4p|p7 exosome component 2 protein-coding chr19-369 chr19 36489363 36489573 + 37.5 0.000 promoter-TSS (NM_001145343) promoter-TSS (NM_001145343) -33 NM_032838 84924 Hs.533939 NM_032838 ENSG00000186017 ZNF566 - zinc finger protein 566 protein-coding chr3-276 chr3 185656510 185656720 + 37.5 0.000 intron (NR_138486, intron 11 of 15) intron (NR_138486, intron 11 of 15) -56637 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr7-187 chr7 44082544 44082754 + 37.5 0.000 promoter-TSS (NR_156113) promoter-TSS (NR_156113) -109 NR_104299 27434 Hs.596982 NM_013284 ENSG00000122678 POLM Pol Mu|Tdt-N DNA polymerase mu protein-coding chr5-216 chr5 9265562 9265772 + 37.5 0.000 intron (NM_003966, intron 5 of 22) LTR53|LTR|ERVL -211772 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr9-147 chr9 98056440 98056650 + 37.5 0.000 promoter-TSS (NM_018946) promoter-TSS (NM_018946) -187 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr14-140 chr14 77377146 77377356 + 37.5 0.000 promoter-TSS (NM_213601) promoter-TSS (NM_213601) -127 NM_001010860 161394 Hs.421961 NM_001010860 ENSG00000100583 SAMD15 C14orf174|FAM15A sterile alpha motif domain containing 15 protein-coding chr16-155 chr16 229175 229385 + 37.5 0.000 exon (NM_001320226, exon 1 of 10) exon (NM_001320226, exon 1 of 10) 169 NM_018032 55692 Hs.16803 NM_018032 ENSG00000007392 LUC7L LUC7B1|Luc7|SR+89|hLuc7B1 LUC7 like protein-coding chr7-317 chr7 134905505 134905715 + 37.5 0.000 intron (NM_033139, intron 1 of 12) intron (NM_033139, intron 1 of 12) 14152 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr12-122 chr12 74537744 74537954 + 37.5 0.000 promoter-TSS (NM_001136262) promoter-TSS (NM_001136262) 14 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr1-485 chr1 169893760 169893970 + 37.5 0.000 promoter-TSS (NM_020423) promoter-TSS (NM_020423) 31 NM_020423 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr11-244 chr11 6612336 6612546 + 37.5 0.000 promoter-TSS (NM_006284) promoter-TSS (NM_006284) -225 NM_006284 6881 Hs.5158 NM_006284 ENSG00000166337 TAF10 TAF2A|TAF2H|TAFII30 TATA-box binding protein associated factor 10 protein-coding chr17-367 chr17 42409509 42409719 + 37.5 0.000 intron (NM_012232, intron 1 of 1) intron (NM_012232, intron 1 of 1) 13642 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 CAVIN1 CAVIN|CGL4|FKSG13|PTRF|cavin-1 caveolae associated protein 1 protein-coding chr7-302 chr7 92765833 92766043 + 37.4 0.000 intron (NM_001259, intron 3 of 7) L2a|LINE|L2 68021 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr5-257 chr5 172361632 172361842 + 37.4 0.000 intron (NM_001017995, intron 7 of 12) MIRb|SINE|MIR 76140 NR_130933 100288254 Hs.531911 NM_001007542 LOC100288254 - uncharacterized LOC100288254 ncRNA chr19-431 chr19 45423671 45423881 + 37.4 0.000 promoter-TSS (NM_001369419) promoter-TSS (NM_001369419) 141 NM_001369410 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr10-212 chr10 72273061 72273271 + 37.4 0.000 promoter-TSS (NM_019058) promoter-TSS (NM_019058) -758 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr8-100 chr8 23092483 23092693 + 37.4 0.000 intron (NR_046173, intron 2 of 3) intron (NR_046173, intron 2 of 3) 8233 NR_046173 254896 Hs.735240 NR_046173 ENSG00000284948 LOC254896 - uncharacterized LOC254896 ncRNA chr9-205 chr9 2844070 2844280 + 37.4 0.000 promoter-TSS (NM_014878) promoter-TSS (NM_014878) -80 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chr3-199 chr3 195119550 195119760 + 37.4 0.000 intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) 14925 NR_036089 100422926 NR_036089 ENSG00000265333 MIR3137 - microRNA 3137 ncRNA chr17-379 chr17 7579347 7579557 + 37.4 0.000 promoter-TSS (NM_001040059) promoter-TSS (NM_001040059) -186 NM_001251 968 Hs.647419 NM_001251 ENSG00000129226 CD68 GP110|LAMP4|SCARD1 CD68 molecule protein-coding chr18-12 chr18 21111857 21112067 + 37.4 0.000 promoter-TSS (NM_005406) promoter-TSS (NM_005406) -149 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr3-238 chr3 170703073 170703283 + 37.4 0.000 intron (NR_135556, intron 2 of 5) MLT1G3|LTR|ERVL-MaLR -117103 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr11-236 chr11 5684893 5685103 + 37.4 0.000 promoter-TSS (NM_033093) promoter-TSS (NM_033093) 76 NM_033034 85363 Hs.125300 NM_033034 ENSG00000132256 TRIM5 RNF88|TRIM5alpha tripartite motif containing 5 protein-coding chr11-432 chr11 114400372 114400582 + 37.4 0.000 promoter-TSS (NM_001286047) promoter-TSS (NM_001286047) 34 NM_019021 54494 Hs.715083 NM_019021 ENSG00000180425 C11orf71 URLC7 chromosome 11 open reading frame 71 protein-coding chr19-415 chr19 4870187 4870397 + 37.4 0.000 Intergenic L2a|LINE|L2 -2625 NM_001164189 10226 Hs.140452 NM_005817 ENSG00000105355 PLIN3 M6PRBP1|PP17|TIP47 perilipin 3 protein-coding chr7-179 chr7 99362954 99363164 + 37.4 0.000 intron (NM_006409, intron 8 of 9) intron (NM_006409, intron 8 of 9) -11671 NM_005720 10095 Hs.489284 NM_005720 ENSG00000130429 ARPC1B ARC41|PLTEID|p40-ARC|p41-ARC actin related protein 2/3 complex subunit 1B protein-coding chr6-147 chr6 26440468 26440678 + 37.4 0.000 promoter-TSS (NM_006994) promoter-TSS (NM_006994) 69 NM_006994 10384 Hs.167741 NM_006994 ENSG00000111801 BTN3A3 BTF3|BTN3.3 butyrophilin subfamily 3 member A3 protein-coding chr5-56 chr5 103258466 103258676 + 37.4 0.000 promoter-TSS (NM_001316969) promoter-TSS (NM_001316969) -192 NM_033211 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr21-16 chr21 46458686 46458896 + 37.4 0.000 promoter-TSS (NM_206890) promoter-TSS (NM_206890) -100 NM_015151 23181 Hs.189585 NM_015151 ENSG00000160305 DIP2A C21orf106|DIP2 disco interacting protein 2 homolog A protein-coding chr16-152 chr16 4299150 4299360 + 37.4 0.000 Intergenic Intergenic -15506 NM_001318918 84662 Hs.592087 NM_032575 ENSG00000126603 GLIS2 NKL|NPHP7 GLIS family zinc finger 2 protein-coding chr19-335 chr19 12681216 12681426 + 37.4 0.000 promoter-TSS (NM_001206974) promoter-TSS (NM_001206974) 49 NR_161467 1725 Hs.79064 NM_001930 ENSG00000095059 DHPS DHS|DS|MIG13 deoxyhypusine synthase protein-coding chr2-128 chr2 241315195 241315405 + 37.4 0.000 promoter-TSS (NM_001349309) promoter-TSS (NM_001349309) -70 NM_001320965 3069 Hs.471851 NM_005336 ENSG00000115677 HDLBP HBP|PRO2900|VGL high density lipoprotein binding protein protein-coding chr22-130 chr22 31496238 31496448 + 37.4 0.000 promoter-TSS (NM_001258327) promoter-TSS (NM_001258327) -193 NM_014775 9814 Hs.62209 NM_014775 ENSG00000198089 SFI1 PISD|PPP1R139|hSfi1p SFI1 centrin binding protein protein-coding chr11-280 chr11 6683398 6683608 + 37.4 0.000 promoter-TSS (NM_022061) promoter-TSS (NM_022061) -163 NM_022061 63875 Hs.523456 NM_022061 ENSG00000158042 MRPL17 L17mt|LIP2|MRP-L17|MRP-L26|RPL17L|RPML26 mitochondrial ribosomal protein L17 protein-coding chr10-156 chr10 98309599 98309809 + 37.4 0.000 Intergenic Intergenic -41510 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr5-139 chr5 77282476 77282686 + 37.4 0.000 intron (NM_001029853, intron 1 of 20) intron (NM_001029853, intron 1 of 20) 71901 NM_001029853 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr10-255 chr10 124498142 124498352 + 37.4 0.000 intron (NM_001167880, intron 5 of 5) intron (NM_001167880, intron 5 of 5) 36424 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chrX-15 chrX 78103969 78104179 + 37.4 0.000 promoter-TSS (NM_000291) promoter-TSS (NM_000291) -174 NM_000291 5230 Hs.78771 NM_000291 ENSG00000102144 PGK1 HEL-S-68p|MIG10|PGKA phosphoglycerate kinase 1 protein-coding chr6-197 chr6 2432400 2432610 + 37.4 0.000 Intergenic Intergenic 186752 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr7-104 chr7 76380041 76380251 + 37.4 0.000 Intergenic CpG -17376 NM_007155 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr1-387 chr1 110004049 110004259 + 37.4 0.000 5' UTR (NM_001242676, exon 1 of 17) 5' UTR (NM_001242676, exon 1 of 17) 206 NM_001242676 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr6-58 chr6 159790293 159790503 + 37.2 0.000 promoter-TSS (NM_014161) promoter-TSS (NM_014161) -48 NM_001318817 29074 Hs.416998 NM_014161 ENSG00000112110 MRPL18 HSPC071|L18mt|MRP-L18 mitochondrial ribosomal protein L18 protein-coding chr8-94 chr8 38105588 38105798 + 37.2 0.000 promoter-TSS (NM_001261832) promoter-TSS (NM_001261832) -100 NM_001261832 9070 Hs.521530 NM_004674 ENSG00000129691 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ASH2 like, histone lysine methyltransferase complex subunit protein-coding chr18-45 chr18 63970533 63970743 + 37.2 0.000 intron (NM_001366198, intron 1 of 6) CpG 557 NM_001031848 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr3-203 chr3 119463631 119463841 + 37.2 0.000 promoter-TSS (NR_073506) promoter-TSS (NR_073506) -121 NR_073506 55254 Hs.594171 NM_018266 ENSG00000176142 TMEM39A - transmembrane protein 39A protein-coding chr11-410 chr11 75241772 75241982 + 37.2 0.000 exon (NM_001195528, exon 1 of 1) exon (NM_001195528, exon 1 of 1) 1103 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr9-169 chr9 137223411 137223621 + 37.2 0.000 Intergenic CpG -1658 NM_199001 375791 Hs.495540 NM_199001 ENSG00000197191 CYSRT1 C9orf169 cysteine rich tail 1 protein-coding chr17-267 chr17 77121923 77122133 + 37.2 0.000 intron (NM_001204410, intron 2 of 17) intron (NM_001204410, intron 2 of 17) -18941 NM_003003 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr6-227 chr6 148192434 148192644 + 37.2 0.000 Intergenic Intergenic -79789 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr19-439 chr19 21358968 21359178 + 37.2 0.000 promoter-TSS (NM_001355241) promoter-TSS (NM_001355241) 73 NM_001355239 148203 Hs.124384 NM_001355237 ENSG00000172687 ZNF738 - zinc finger protein 738 protein-coding chr17-194 chr17 27333063 27333273 + 37.2 0.000 Intergenic Intergenic 39054 NM_015626 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding chr9-105 chr9 128067951 128068161 + 37.2 0.000 promoter-TSS (NM_197956) promoter-TSS (NM_197956) -144 NM_001330988 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr4-117 chr4 6927069 6927279 + 37.2 0.000 intron (NM_020773, intron 2 of 13) intron (NM_020773, intron 2 of 13) 17348 NM_020773 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr14-33 chr14 52729956 52730166 + 37.2 0.000 promoter-TSS (NM_145251) promoter-TSS (NM_145251) -105 NM_001130701 6815 Hs.364980 NM_145251 ENSG00000198252 STYX - serine/threonine/tyrosine interacting protein protein-coding chr1-394 chr1 21909957 21910167 + 37.2 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 27248 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr15-45 chr15 90935292 90935502 + 37.2 0.000 intron (NM_001323620, intron 1 of 19) CpG 112 NM_018671 55898 Hs.389461 NM_017979 ENSG00000140553 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 myosin chaperone A protein-coding chr9-246 chr9 124242927 124243137 + 37.2 0.000 Intergenic Intergenic -14574 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr1-235 chr1 6393570 6393780 + 37.2 0.000 promoter-TSS (NM_007274) promoter-TSS (NM_007274) 91 NM_007274 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr2-442 chr2 189661262 189661472 + 37.2 0.000 promoter-TSS (NM_001353497) promoter-TSS (NM_001353497) -32 NM_001353493 110599588 Hs.101364 NM_001353493 ENSG00000286053 ASDURF ASNSD1|ASNSD1-SEP|NS3TP1 ASNSD1 upstream reading frame protein-coding chr7-201 chr7 100673425 100673635 + 37.2 0.000 promoter-TSS (NM_005273) promoter-TSS (NM_005273) -210 NM_005273 2783 Hs.185172 NM_005273 ENSG00000172354 GNB2 - G protein subunit beta 2 protein-coding chr9-324 chr9 125243261 125243471 + 37.2 0.000 Intergenic Intergenic -2023 NM_005347 3309 Hs.743241 NM_005347 ENSG00000044574 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock protein family A (Hsp70) member 5 protein-coding chr14-125 chr14 23556014 23556224 + 37.1 0.000 promoter-TSS (NM_024328) promoter-TSS (NM_024328) 137 NM_001256322 79178 Hs.655179 NM_024328 ENSG00000259431 THTPA THTP|THTPASE thiamine triphosphatase protein-coding chr1-386 chr1 100352268 100352478 + 37.1 0.000 promoter-TSS (NM_033312) promoter-TSS (NM_033312) -94 NM_001319212 8556 Hs.127411 NM_003672 ENSG00000079335 CDC14A DFNB105|DFNB32|DFNB35|cdc14|hCDC14 cell division cycle 14A protein-coding chr3-84 chr3 15601764 15601974 + 37.1 0.000 promoter-TSS (NM_001284416) promoter-TSS (NM_001284416) -100 NM_001281725 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr17-389 chr17 81601569 81601779 + 37.1 0.000 intron (NM_001369698, intron 8 of 16) intron (NM_001369698, intron 8 of 16) -24241 NR_130139 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr11-261 chr11 62841345 62841555 + 37.1 0.000 intron (NM_001369451, intron 1 of 11) intron (NM_001369451, intron 1 of 11) 359 NM_001369451 54663 Hs.654620 NM_018093 ENSG00000133316 WDR74 Nsa1 WD repeat domain 74 protein-coding chr19-469 chr19 49665654 49665864 + 37.1 0.000 promoter-TSS (NM_001197122) promoter-TSS (NM_001197122) 98 NM_001197124 3661 Hs.75254 NM_001571 ENSG00000126456 IRF3 IIAE7 interferon regulatory factor 3 protein-coding chr3-105 chr3 52770864 52771074 + 37.1 0.000 promoter-TSS (NM_001348414) promoter-TSS (NM_001348414) -20 NM_001193533 6787 Hs.631921 NM_003157 ENSG00000114904 NEK4 NRK2|STK2|pp12301 NIMA related kinase 4 protein-coding chr14-89 chr14 101948301 101948511 + 37.1 0.000 Intergenic CpG -16167 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr2-352 chr2 231192512 231192722 + 37.1 0.000 Intergenic Intergenic -6014 NM_001271466 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr18-61 chr18 34979222 34979432 + 37.1 0.000 intron (NM_001143827, intron 1 of 7) intron (NM_001143827, intron 1 of 7) 959 NM_001143827 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr5-220 chr5 177497624 177497834 + 37.1 0.000 promoter-TSS (NM_213636) promoter-TSS (NM_213636) -124 NM_213636 9260 Hs.533040 NM_005451 ENSG00000196923 PDLIM7 LMP1|LMP3 PDZ and LIM domain 7 protein-coding chr22-54 chr22 50293380 50293590 + 37.1 0.000 intron (NM_012401, intron 2 of 36) (GCCCA)n|Simple_repeat|Simple_repeat 14161 NM_012401 23654 Hs.3989 NM_012401 ENSG00000196576 PLXNB2 MM1|Nbla00445|PLEXB2|dJ402G11.3 plexin B2 protein-coding chr1-270 chr1 11803614 11803824 + 37.1 0.000 promoter-TSS (NM_001330358) promoter-TSS (NM_001330358) -42 NM_001330358 4524 Hs.214142 NM_005957 ENSG00000177000 MTHFR - methylenetetrahydrofolate reductase protein-coding chr12-180 chr12 104138022 104138232 + 37.1 0.000 promoter-TSS (NM_006166) promoter-TSS (NM_006166) 83 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr1-404 chr1 228087812 228088022 + 37.1 0.000 intron (NM_001024227, intron 1 of 4) intron (NM_001024227, intron 1 of 4) 4767 NM_001024227 375 Hs.286221 NM_001658 ENSG00000143761 ARF1 PVNH8 ADP ribosylation factor 1 protein-coding chr12-139 chr12 124695061 124695271 + 37.1 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -127554 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr17-275 chr17 5526877 5527087 + 37.1 0.000 intron (NM_014922, intron 12 of 15) intron (NM_014922, intron 12 of 15) -25976 NM_001162371 728392 Hs.104305 NM_001162371 ENSG00000286190 LOC728392 - uncharacterized LOC728392 protein-coding chr19-332 chr19 48363172 48363382 + 37.1 0.000 intron (NM_001303539, intron 2 of 6) CpG 663 NM_001303538 55260 Hs.351335 NM_018273 ENSG00000161558 TMEM143 - transmembrane protein 143 protein-coding chr7-120 chr7 73557068 73557278 + 37.1 0.000 promoter-TSS (NR_036682) promoter-TSS (NR_036682) 63 NR_036682 9275 Hs.647051 NM_001707 ENSG00000106635 BCL7B - BAF chromatin remodeling complex subunit BCL7B protein-coding chr9-111 chr9 93566581 93566791 + 37.1 0.000 TTS (NM_014612) TTS (NM_014612) -9898 NM_005392 5253 Hs.211441 NM_005392 ENSG00000197724 PHF2 CENP-35|GRC5|JHDM1E|KDM7C PHD finger protein 2 protein-coding chr11-281 chr11 33802655 33802865 + 37.1 0.000 Intergenic Intergenic 28061 NR_120550 101928440 Hs.202343 NR_120550 ENSG00000254508 FBXO3-DT FBXO3-AS1 FBXO3 divergent transcript ncRNA chr2-215 chr2 97645835 97646045 + 37.0 0.000 promoter-TSS (NM_001862) promoter-TSS (NM_001862) -122 NM_001862 1329 Hs.1342 NM_001862 ENSG00000135940 COX5B COXVB cytochrome c oxidase subunit 5B protein-coding chr4-107 chr4 1033940 1034150 + 37.0 0.000 Intergenic Intergenic 21581 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr5-154 chr5 173057284 173057494 + 37.0 0.000 intron (NM_001168393, intron 1 of 3) CpG 1037 NM_001168393 153222 Hs.484195 NM_153607 ENSG00000164463 CREBRF C5orf41|LRF CREB3 regulatory factor protein-coding chr2-81 chr2 218710775 218710985 + 37.0 0.000 promoter-TSS (NM_014640) promoter-TSS (NM_014640) 45 NM_014640 9654 Hs.471405 NM_014640 ENSG00000135912 TTLL4 - tubulin tyrosine ligase like 4 protein-coding chr14-120 chr14 103385244 103385454 + 37.0 0.000 promoter-TSS (NM_001128918) promoter-TSS (NM_001128918) -15 NM_001128921 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr1-391 chr1 222371441 222371651 + 37.0 0.000 Intergenic Intergenic 176558 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr19-345 chr19 4246934 4247144 + 37.0 0.000 promoter-TSS (NM_018074) promoter-TSS (NM_018074) -41 NM_018074 55702 Hs.21811 NM_018074 ENSG00000105248 YJU2 CCDC94 YJU2 splicing factor homolog protein-coding chr11-365 chr11 16738522 16738732 + 37.0 0.000 promoter-TSS (NM_001367872) promoter-TSS (NM_001367872) -20 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr4-203 chr4 1173524 1173734 + 37.0 0.000 promoter-TSS (NM_001128325) promoter-TSS (NM_001128325) -418 NM_001128325 10417 Hs.302963 NM_012445 ENSG00000159674 SPON2 DIL-1|DIL1|M-SPONDIN|MINDIN spondin 2 protein-coding chr7-202 chr7 158856306 158856516 + 37.0 0.000 promoter-TSS (NM_001350916) promoter-TSS (NM_001350916) -147 NM_001350915 55112 Hs.389945 NM_018051 ENSG00000126870 WDR60 FAP163|SRPS6|SRTD8 WD repeat domain 60 protein-coding chr9-175 chr9 122828146 122828356 + 37.0 0.000 intron (NM_005388, intron 1 of 3) CpG 337 NM_005388 5082 Hs.271749 NM_005388 ENSG00000136940 PDCL PhLP phosducin like protein-coding chr19-271 chr19 49487285 49487495 + 37.0 0.000 promoter-TSS (NM_001270491) promoter-TSS (NM_001270491) -164 NM_001270491 23521 Hs.523185 NM_012423 ENSG00000142541 RPL13A L13A|TSTA1 ribosomal protein L13a protein-coding chr19-303 chr19 27793754 27793964 + 37.0 0.000 promoter-TSS (NR_027301) promoter-TSS (NR_027301) -36 NR_110687 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA chr17-350 chr17 77494817 77495027 + 37.0 0.000 intron (NM_006640, intron 9 of 10) intron (NM_006640, intron 9 of 10) 19679 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr18-46 chr18 50012039 50012249 + 37.0 0.000 intron (NM_001080467, intron 4 of 39) MER5B|DNA|hAT-Charlie 114419 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr11-346 chr11 10751019 10751229 + 37.0 0.000 promoter-TSS (NM_001346279) promoter-TSS (NM_001346279) -122 NM_014633 9646 Hs.725151 NM_014633 ENSG00000198730 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding chr1-611 chr1 27599208 27599418 + 37.0 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 4181 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr19-506 chr19 36331635 36331845 + 37.0 0.000 promoter-TSS (NR_038279) promoter-TSS (NR_038279) -22 NR_038279 100506930 Hs.595153 NR_038278 ENSG00000232677 LINC00665 - long intergenic non-protein coding RNA 665 ncRNA chr2-302 chr2 216535404 216535614 + 37.0 0.000 Intergenic Intergenic 36665 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr2-190 chr2 241665480 241665690 + 37.0 0.000 intron (NM_013325, intron 7 of 12) L1MC4|LINE|L1 21230 NM_012145 1841 Hs.471873 NM_012145 ENSG00000168393 DTYMK CDC8|PP3731|TMPK|TYMK deoxythymidylate kinase protein-coding chr1-255 chr1 27863245 27863455 + 37.0 0.000 Intergenic Intergenic -9193 NM_004848 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1|ICB1 thymocyte selection associated family member 2 protein-coding chr8-122 chr8 85220238 85220448 + 37.0 0.000 promoter-TSS (NM_001293320) promoter-TSS (NM_001293320) 31 NR_120681 401466 Hs.443072 NM_001099670 ENSG00000176731 RBIS C8orf59 ribosomal biogenesis factor protein-coding chr18-43 chr18 23453152 23453362 + 37.0 0.000 promoter-TSS (NM_001348193) promoter-TSS (NM_001348193) -30 NM_001348193 8780 Hs.445511 NM_003831 ENSG00000101782 RIOK3 SUDD RIO kinase 3 protein-coding chr7-528 chr7 129970221 129970431 + 36.9 0.000 Intergenic Intergenic -17366 NM_001202498 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr5-215 chr5 145776144 145776354 + 36.9 0.000 intron (NM_205846, intron 5 of 6) Tigger7|DNA|TcMar-Tigger 59093 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr11-407 chr11 13717474 13717684 + 36.9 0.000 intron (NM_032228, intron 9 of 11) MLT1G-int|LTR|ERVL-MaLR 48911 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding chr11-444 chr11 82900292 82900502 + 36.9 0.000 promoter-TSS (NM_005040) promoter-TSS (NM_005040) 33 NM_005040 5547 Hs.523936 NM_005040 ENSG00000137509 PRCP HUMPCP|PCP prolylcarboxypeptidase protein-coding chr19-368 chr19 16435602 16435812 + 36.9 0.000 intron (NM_021235, intron 6 of 22) intron (NM_021235, intron 6 of 22) 36263 NM_001258374 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr12-227 chr12 69534497 69534707 + 36.9 0.000 intron (NM_001278354, intron 4 of 9) intron (NM_001278354, intron 4 of 9) 19162 NR_145803 109623461 NR_145803 SNORA113 - small nucleolar RNA, H/ACA box 113 snoRNA chr9-209 chr9 131608614 131608824 + 36.9 0.000 intron (NM_198679, intron 11 of 23) intron (NM_198679, intron 11 of 23) 63196 NM_001365666 642515 NM_001365666 ENSG00000283526 PRRT1B DSPD2|IFITMD8 proline rich transmembrane protein 1B protein-coding chr2-210 chr2 239267600 239267810 + 36.9 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -37757 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr16-396 chr16 87394435 87394645 + 36.9 0.000 intron (NM_022818, intron 1 of 3) MIR3|SINE|MIR 2204 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr16-321 chr16 75433511 75433721 + 36.9 0.000 promoter-TSS (NM_006324) promoter-TSS (NM_006324) -113 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr1-189 chr1 157045738 157045948 + 36.9 0.000 promoter-TSS (NM_198236) promoter-TSS (NM_198236) -101 NM_198236 9826 Hs.516954 NM_014784 ENSG00000132694 ARHGEF11 GTRAP48|PDZ-RHOGEF Rho guanine nucleotide exchange factor 11 protein-coding chr7-207 chr7 99919432 99919642 + 36.9 0.000 promoter-TSS (NM_033017) promoter-TSS (NM_033017) -7 NM_033017 89122 Hs.50749 NM_033017 ENSG00000146833 TRIM4 RNF87 tripartite motif containing 4 protein-coding chr7-250 chr7 42493691 42493901 + 36.9 0.000 Intergenic Intergenic 212651 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr3-257 chr3 196662718 196662928 + 36.9 0.000 TTS (NM_198565) TTS (NM_198565) 23129 NM_198565 375387 Hs.702186 NM_198565 ENSG00000174004 NRROS ELLP3030|GARPL1|LRRC33|UNQ3030 negative regulator of reactive oxygen species protein-coding chr5-218 chr5 134758522 134758732 + 36.9 0.000 promoter-TSS (NR_125341) promoter-TSS (NR_125341) -152 NR_125341 9879 Hs.406549 NM_014829 ENSG00000145833 DDX46 PRPF5|Prp5 DEAD-box helicase 46 protein-coding chr8-205 chr8 128018855 128019065 + 36.9 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) 10062 NR_031611 100302170 NR_031611 ENSG00000283200 MIR1206 MIRN1206|hsa-mir-1206 microRNA 1206 ncRNA chr22-119 chr22 36368789 36368999 + 36.9 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 19173 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr1-214 chr1 150876627 150876837 + 36.9 0.000 promoter-TSS (NM_001350226) promoter-TSS (NM_001350226) -133 NM_001197325 405 Hs.632446 NM_001668 ENSG00000143437 ARNT HIF-1-beta|HIF-1beta|HIF1-beta|HIF1B|HIF1BETA|TANGO|bHLHe2 aryl hydrocarbon receptor nuclear translocator protein-coding chr9-286 chr9 109793314 109793524 + 36.9 0.000 intron (NM_053016, intron 1 of 6) intron (NM_053016, intron 1 of 6) 13221 NM_053016 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr12-169 chr12 48865714 48865924 + 36.9 0.000 promoter-TSS (NM_014470) promoter-TSS (NM_014470) 51 NM_014470 27289 Hs.124940 NM_014470 ENSG00000172602 RND1 ARHS|RHO6|RHOS Rho family GTPase 1 protein-coding chr2-274 chr2 3377812 3378022 + 36.9 0.000 promoter-TSS (NM_001330530) promoter-TSS (NM_001330530) -99 NM_001330531 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr1-431 chr1 156104170 156104380 + 36.9 0.000 intron (NM_001282625, intron 3 of 12) intron (NM_001282625, intron 3 of 12) -10395 NM_170708 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr9-353 chr9 128098391 128098601 + 36.8 0.000 promoter-TSS (NM_052901) promoter-TSS (NM_052901) 14 NM_052901 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr9-255 chr9 98488639 98488849 + 36.8 0.000 intron (NM_005458, intron 4 of 18) intron (NM_005458, intron 4 of 18) 220191 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr7-157 chr7 2209497 2209707 + 36.8 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) 23343 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr21-38 chr21 42997131 42997341 + 36.8 0.000 intron (NM_004571, intron 1 of 10) intron (NM_004571, intron 1 of 10) 22674 NM_004571 5316 Hs.431043 NM_004571 ENSG00000160199 PKNOX1 PREP1|pkonx1c PBX/knotted 1 homeobox 1 protein-coding chr10-138 chr10 93496322 93496532 + 36.8 0.000 promoter-TSS (NM_001127182) promoter-TSS (NM_001127182) -185 NM_001127182 55165 Hs.14559 NM_018131 ENSG00000138180 CEP55 C10orf3|CT111|MARCH|URCC6 centrosomal protein 55 protein-coding chr16-281 chr16 84177094 84177304 + 36.8 0.000 TTS (NM_001243159) TTS (NM_001243159) 9858 NM_001243156 9013 Hs.153022 NM_005679 ENSG00000103168 TAF1C MGC:39976|SL1|TAFI110|TAFI95 TATA-box binding protein associated factor, RNA polymerase I subunit C protein-coding chr16-119 chr16 28879855 28880065 + 36.8 0.000 promoter-TSS (NR_046287) promoter-TSS (NR_046287) -39 NR_046287 100289092 Hs.666631 NR_046287 ENSG00000260442 ATP2A1-AS1 - ATP2A1 antisense RNA 1 ncRNA chr8-49 chr8 43140204 43140414 + 36.8 0.000 promoter-TSS (NM_001363229) promoter-TSS (NM_001363229) -155 NM_001363229 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr20-56 chr20 63865093 63865303 + 36.8 0.000 promoter-TSS (NM_199359) promoter-TSS (NM_199359) -30 NM_001243895 7165 Hs.473296 NM_003288 ENSG00000101150 TPD52L2 D54|TPD54 TPD52 like 2 protein-coding chrX-55 chrX 15674843 15675053 + 36.8 0.000 promoter-TSS (NR_160541) promoter-TSS (NR_160541) 32 NR_160541 340591 Hs.732244 NR_026551 ENSG00000186312 CA5BP1 CA5BL|CA5BP|PRO2325 carbonic anhydrase 5B pseudogene 1 pseudo chr10-401 chr10 42367965 42368175 + 36.8 0.000 promoter-TSS (NR_024380) promoter-TSS (NR_024380) -25 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr19-262 chr19 37078087 37078297 + 36.8 0.000 promoter-TSS (NM_001329522) promoter-TSS (NM_001329522) -30 NM_001329520 147923 Hs.444992 NM_144689 ENSG00000197050 ZNF420 APAK zinc finger protein 420 protein-coding chr16-126 chr16 67226880 67227090 + 36.8 0.000 promoter-TSS (NM_014187) promoter-TSS (NM_014187) 13 NM_001004055 26231 Hs.461000 NM_012163 ENSG00000125122 LRRC29 FBL9|FBXL9 leucine rich repeat containing 29 protein-coding chr5-87 chr5 429819 430029 + 36.8 0.000 intron (NM_020731, intron 9 of 11) intron (NM_020731, intron 9 of 11) 13236 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr11-127 chr11 65555856 65556066 + 36.8 0.000 intron (NM_001164266, intron 1 of 26) intron (NM_001164266, intron 1 of 26) 2267 NM_001130144 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr19-250 chr19 10565966 10566176 + 36.8 0.000 promoter-TSS (NM_023008) promoter-TSS (NM_023008) -61 NM_023008 65095 Hs.709967 NM_023008 ENSG00000129347 KRI1 - KRI1 homolog protein-coding chr8-111 chr8 114846749 114846959 + 36.8 0.000 Intergenic LTR16C|LTR|ERVL 821159 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr19-294 chr19 49877801 49878011 + 36.8 0.000 promoter-TSS (NM_032375) promoter-TSS (NM_032375) 204 NM_001168222 79735 Hs.631587 NM_024682 ENSG00000104946 TBC1D17 - TBC1 domain family member 17 protein-coding chr2-231 chr2 215312008 215312218 + 36.8 0.000 promoter-TSS (NM_004044) promoter-TSS (NM_004044) 54 NM_004044 471 Hs.90280 NM_004044 ENSG00000138363 ATIC AICAR|AICARFT|HEL-S-70p|IMPCHASE|PURH 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding chr3-108 chr3 123201758 123201968 + 36.8 0.000 promoter-TSS (NM_012430) promoter-TSS (NM_012430) -80 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr2-65 chr2 238320317 238320527 + 36.8 0.000 promoter-TSS (NM_015650) promoter-TSS (NM_015650) -96 NM_015650 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding chr5-389 chr5 106397793 106398003 + 36.8 0.000 Intergenic Intergenic 613116 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr22-58 chr22 45309754 45309964 + 36.8 0.000 promoter-TSS (NM_017911) promoter-TSS (NM_017911) 21 NM_001349915 55007 Hs.265018 NM_017911 ENSG00000100376 FAM118A C22orf8 family with sequence similarity 118 member A protein-coding chr3-195 chr3 50350870 50351080 + 36.8 0.000 promoter-TSS (NM_006545) promoter-TSS (NM_006545) 113 NM_007022 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr4-282 chr4 7861482 7861692 + 36.8 0.000 intron (NM_198595, intron 3 of 16) intron (NM_198595, intron 3 of 16) 10721 NM_001371090 chr11-380 chr11 63567334 63567544 + 36.8 0.000 Intergenic LTR43|LTR|ERV1 -4060 NM_017878 54979 Hs.272805 NM_017878 ENSG00000133328 PLAAT2 HRASLS2|PLA1/2-2|PLAAT-2 phospholipase A and acyltransferase 2 protein-coding chr12-411 chr12 3168756 3168966 + 36.8 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 91482 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr9-236 chr9 26956397 26956607 + 36.8 0.000 promoter-TSS (NM_001349928) promoter-TSS (NM_001349928) 90 NM_025103 80173 Hs.145402 NM_025103 ENSG00000096872 IFT74 BBS20|CCDC2|CMG-1|CMG1 intraflagellar transport 74 protein-coding chr1-293 chr1 26306593 26306803 + 36.8 0.000 promoter-TSS (NM_001077262) promoter-TSS (NM_001077262) 6 NM_001077262 91544 Hs.145061 NM_145345 ENSG00000158062 UBXN11 COA-1|PP2243|SOC|SOCI|UBXD5 UBX domain protein 11 protein-coding chr11-336 chr11 86244526 86244736 + 36.8 0.000 promoter-TSS (NM_003797) promoter-TSS (NM_003797) -122 NM_003797 8726 Hs.503510 NM_003797 ENSG00000074266 EED COGIS|HEED|WAIT1 embryonic ectoderm development protein-coding chr3-237 chr3 156788258 156788468 + 36.6 0.000 intron (NR_038387, intron 1 of 2) intron (NR_038387, intron 1 of 2) 23658 NR_003284 647033 Hs.745109 NR_003284 PA2G4P4 PA2G4L1 proliferation-associated 2G4 pseudogene 4 pseudo chr6-62 chr6 42050545 42050755 + 36.6 0.000 intron (NM_138572, intron 1 of 8) CpG 126 NM_138572 129685 Hs.520122 NM_138572 ENSG00000137413 TAF8 II|TAF|TAF(II)43|TAFII-43|TAFII43|TBN TATA-box binding protein associated factor 8 protein-coding chr11-245 chr11 64269957 64270167 + 36.6 0.000 TTS (NM_000932) TTS (NM_000932) -14277 NM_001170726 56834 Hs.523763 NM_020155 ENSG00000173264 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding chr21-25 chr21 37060437 37060647 + 36.6 0.000 Intergenic Intergenic 3524 NR_131189 105372795 Hs.528019 NR_131189 LOC105372795 - uncharacterized LOC105372795 ncRNA chr1-249 chr1 38012507 38012717 + 36.6 0.000 promoter-TSS (NM_016037) promoter-TSS (NM_016037) -122 NM_016037 51118 Hs.472038 NM_016037 ENSG00000183520 UTP11 CGI-94|CGI94|UTP11L UTP11 small subunit processome component protein-coding chr21-67 chr21 42724392 42724602 + 36.6 0.000 intron (NM_001001578, intron 3 of 16) intron (NM_001001578, intron 3 of 16) 55497 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr19-354 chr19 4400610 4400820 + 36.6 0.000 promoter-TSS (NM_001199944) promoter-TSS (NM_001199944) -168 NM_001199944 6455 Hs.97616 NM_003025 ENSG00000141985 SH3GL1 CNSA1|EEN|SH3D2B|SH3P8 SH3 domain containing GRB2 like 1, endophilin A2 protein-coding chr2-589 chr2 201854513 201854723 + 36.6 0.000 intron (NM_001366386, intron 9 of 13) intron (NM_001366386, intron 9 of 13) 48039 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr11-132 chr11 819225 819435 + 36.6 0.000 intron (NM_020376, intron 1 of 9) CpG 416 NM_020376 57104 Hs.654697 NM_020376 ENSG00000177666 PNPLA2 1110001C14Rik|ATGL|FP17548|PEDF-R|TTS-2.2|TTS2|iPLA2zeta patatin like phospholipase domain containing 2 protein-coding chr1-522 chr1 64343504 64343714 + 36.6 0.000 Intergenic Intergenic -126520 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr4-112 chr4 56435508 56435718 + 36.6 0.000 promoter-TSS (NM_001079524) promoter-TSS (NM_001079524) 2 NM_002703 5471 Hs.331420 NM_002703 ENSG00000128059 PPAT ATASE|GPAT|PRAT phosphoribosyl pyrophosphate amidotransferase protein-coding chr10-243 chr10 404435 404645 + 36.6 0.000 intron (NM_014974, intron 9 of 36) intron (NM_014974, intron 9 of 36) -224024 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr9-306 chr9 99253996 99254206 + 36.6 0.000 Intergenic Intergenic 31819 NM_006808 10952 Hs.191887 NM_006808 ENSG00000106803 SEC61B - SEC61 translocon beta subunit protein-coding chr4-139 chr4 3388935 3389145 + 36.6 0.000 intron (NM_002926, intron 4 of 16) intron (NM_002926, intron 4 of 16) 18842 NM_198227 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr1-1001 chr1 35202164 35202374 + 36.6 0.000 Intergenic Intergenic -9124 NM_005066 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr17-244 chr17 75700547 75700757 + 36.6 0.000 intron (NR_126037, intron 5 of 8) intron (NR_126037, intron 5 of 8) -20807 NM_001321123 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr16-221 chr16 89333725 89333935 + 36.6 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) 12697 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr20-91 chr20 45336701 45336911 + 36.6 0.000 intron (NM_002999, intron 1 of 4) intron (NM_002999, intron 1 of 4) 11618 NM_002999 6385 Hs.632267 NM_002999 ENSG00000124145 SDC4 SYND4 syndecan 4 protein-coding chr11-303 chr11 83286181 83286391 + 36.6 0.000 5' UTR (NM_021825, exon 1 of 9) 5' UTR (NM_021825, exon 1 of 9) 121 NM_001286117 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr1-363 chr1 161197234 161197444 + 36.6 0.000 intron (NM_005099, intron 1 of 8) intron (NM_005099, intron 1 of 8) 1715 NM_001320336 9507 Hs.211604 NM_005099 ENSG00000158859 ADAMTS4 ADAMTS-2|ADAMTS-4|ADMP-1 ADAM metallopeptidase with thrombospondin type 1 motif 4 protein-coding chr3-150 chr3 51385005 51385215 + 36.6 0.000 promoter-TSS (NM_006010) promoter-TSS (NM_006010) -181 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr20-54 chr20 23350503 23350713 + 36.6 0.000 promoter-TSS (NM_013248) promoter-TSS (NM_013248) -183 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding chr12-254 chr12 71686106 71686316 + 36.6 0.000 5' UTR (NM_018279, exon 1 of 6) 5' UTR (NM_018279, exon 1 of 6) 129 NM_018279 55266 Hs.644802 NM_018279 ENSG00000139291 TMEM19 - transmembrane protein 19 protein-coding chr10-94 chr10 102065267 102065477 + 36.6 0.000 promoter-TSS (NM_024747) promoter-TSS (NM_024747) 5 NM_024747 79803 Hs.125133 NM_024747 ENSG00000166189 HPS6 BLOC2S3 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 protein-coding chr14-184 chr14 63893762 63893972 + 36.6 0.000 intron (NM_015180, intron 1 of 114) intron (NM_015180, intron 1 of 114) 40863 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr5-83 chr5 179209551 179209761 + 36.5 0.000 intron (NM_014244, intron 3 of 21) intron (NM_014244, intron 3 of 21) 135805 NM_014244 9509 Hs.23871 NM_014244 ENSG00000087116 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif 2 protein-coding chr1-495 chr1 112705056 112705266 + 36.5 0.000 5' UTR (NM_175744, exon 2 of 6) 5' UTR (NM_175744, exon 2 of 6) 1895 NM_001042679 389 Hs.502659 NM_175744 ENSG00000155366 RHOC ARH9|ARHC|H9|RHOH9 ras homolog family member C protein-coding chr16-242 chr16 81238533 81238743 + 36.5 0.000 promoter-TSS (NM_017429) promoter-TSS (NM_017429) -51 NM_017429 53630 Hs.212172 NM_017429 ENSG00000135697 BCO1 BCDO|BCDO1|BCMO|BCMO1|BCO beta-carotene oxygenase 1 protein-coding chr14-165 chr14 68937719 68937929 + 36.5 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 41478 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr20-150 chr20 34190670 34190880 + 36.5 0.000 Intergenic Intergenic -69590 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr22-76 chr22 30592096 30592306 + 36.5 0.000 promoter-TSS (NM_014303) promoter-TSS (NM_014303) -291 NM_001243225 23481 Hs.517543 NM_014303 ENSG00000100029 PES1 NOP7|PES pescadillo ribosomal biogenesis factor 1 protein-coding chr20-121 chr20 50980124 50980334 + 36.5 0.000 Intergenic Intergenic 21411 NM_014484 27304 Hs.159410 NM_014484 ENSG00000124217 MOCS3 UBA4 molybdenum cofactor synthesis 3 protein-coding chr4-63 chr4 139453673 139453883 + 36.5 0.000 promoter-TSS (NM_031296) promoter-TSS (NM_031296) 263 NR_159964 107984036 Hs.605782 NR_159963 LOC107984036 - uncharacterized LOC107984036 ncRNA chr10-196 chr10 35421716 35421926 + 36.5 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 84947 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr1-872 chr1 212088538 212088748 + 36.5 0.000 intron (NM_001286229, intron 11 of 12) L2c|LINE|L2 11030 NR_036068 100422947 NR_036068 ENSG00000264358 MIR3122 mir-3122 microRNA 3122 ncRNA chr16-410 chr16 53156614 53156824 + 36.5 0.000 exon (NM_025134, exon 2 of 39) exon (NM_025134, exon 2 of 39) 793 NM_001308319 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr10-363 chr10 124081586 124081796 + 36.5 0.000 intron (NM_001270765, intron 1 of 5) intron (NM_001270765, intron 1 of 5) 10715 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr1-518 chr1 36450324 36450534 + 36.5 0.000 promoter-TSS (NM_206837) promoter-TSS (NM_206837) 22 NM_145047 127700 Hs.202207 NM_145047 ENSG00000116885 OSCP1 C1orf102|NOR1 organic solute carrier partner 1 protein-coding chr2-320 chr2 27321187 27321397 + 36.5 0.000 intron (NM_002437, intron 2 of 7) intron (NM_002437, intron 2 of 7) 1805 NM_002437 4358 Hs.75659 NM_002437 ENSG00000115204 MPV17 CMT2EE|MTDPS6|SYM1 mitochondrial inner membrane protein MPV17 protein-coding chr3-112 chr3 185498904 185499114 + 36.5 0.000 promoter-TSS (NM_080652) promoter-TSS (NM_080652) 26 NM_080652 90407 Hs.677570 NM_080652 ENSG00000163900 TMEM41A 2900010K02Rik transmembrane protein 41A protein-coding chr7-255 chr7 55186247 55186457 + 36.5 0.000 intron (NR_047551, intron 1 of 1) intron (NR_047551, intron 1 of 1) 2597 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr3-144 chr3 105473646 105473856 + 36.5 0.000 intron (NM_001243280, intron 1 of 14) intron (NM_001243280, intron 1 of 14) 106842 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr12-268 chr12 64561056 64561266 + 36.5 0.000 Intergenic LTR16B|LTR|ERVL -49334 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr14-254 chr14 94665166 94665376 + 36.5 0.000 Intergenic Zaphod|DNA|hAT-Tip100 24546 NR_015340 388007 Hs.527795 NR_015340 ENSG00000187483 SERPINA13P SERPINA13|UNQ6121 serpin family A member 13, pseudogene pseudo chr7-280 chr7 51034428 51034638 + 36.5 0.000 intron (NM_015198, intron 8 of 12) intron (NM_015198, intron 8 of 12) -241080 NM_001371008 chr1-149 chr1 109667855 109668065 + 36.5 0.000 promoter-TSS (NM_001142368) promoter-TSS (NM_001142368) -62 NM_001142368 2946 Hs.279837 NM_000848 ENSG00000213366 GSTM2 GST4|GSTM|GSTM2-2|GTHMUS glutathione S-transferase mu 2 protein-coding chr5-210 chr5 38783260 38783470 + 36.5 0.000 intron (NR_109951, intron 2 of 3) intron (NR_109951, intron 2 of 3) 62464 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA chr6-88 chr6 131628176 131628386 + 36.5 0.000 promoter-TSS (NM_004830) promoter-TSS (NM_004830) -39 NM_004830 9439 Hs.29679 NM_004830 ENSG00000112282 MED23 ARC130|CRSP130|CRSP133|CRSP3|DRIP130|MRT18|SUR-2|SUR2 mediator complex subunit 23 protein-coding chr22-145 chr22 44037654 44037864 + 36.5 0.000 intron (NM_001243386, intron 1 of 11) intron (NM_001243386, intron 1 of 11) 11455 NM_001243386 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr5-140 chr5 141910300 141910510 + 36.5 0.000 Intergenic Intergenic -13466 NM_001142603 9812 Hs.210532 NM_014773 ENSG00000081791 DELE1 DELE|KIAA0141 DAP3 binding cell death enhancer 1 protein-coding chr19-544 chr19 32373895 32374105 + 36.5 0.000 intron (NM_001136156, intron 5 of 6) Tigger6a|DNA|TcMar-Tigger 28390 NM_001136156 22847 Hs.205392 NM_014910 ENSG00000168813 ZNF507 - zinc finger protein 507 protein-coding chr18-38 chr18 54776317 54776527 + 36.5 0.000 Intergenic LTR84b|LTR|ERVL -52055 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr8-60 chr8 102754259 102754469 + 36.5 0.000 Intergenic Intergenic -52458 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr11-182 chr11 47416094 47416304 + 36.4 0.000 3' UTR (NM_152264, exon 10 of 10) 3' UTR (NM_152264, exon 10 of 10) 7609 NM_001128225 91252 Hs.523664 NM_152264 ENSG00000165915 SLC39A13 EDSSPD3|LZT-Hs9|SCDEDS|ZIP13 solute carrier family 39 member 13 protein-coding chr4-99 chr4 1207837 1208047 + 36.4 0.000 intron (NR_024569, intron 1 of 3) intron (NR_024569, intron 1 of 3) 1020 NR_024569 100130872 Hs.302963 NR_024569 LOC100130872 - uncharacterized LOC100130872 ncRNA chr10-149 chr10 32980612 32980822 + 36.4 0.000 Intergenic CpG -22487 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr14-71 chr14 21103786 21103996 + 36.4 0.000 TTS (NM_001146683) TTS (NM_001146683) 813 NM_001102454 51222 Hs.250493 NM_016423 ENSG00000165804 ZNF219 ZFP219 zinc finger protein 219 protein-coding chr5-235 chr5 112684904 112685114 + 36.4 0.000 Intergenic Intergenic -2121 NR_104673 102467216 Hs.174158 NR_104673 LOC102467216 - uncharacterized LOC102467216 ncRNA chr1-208 chr1 164558857 164559067 + 36.4 0.000 promoter-TSS (NM_001353131) promoter-TSS (NM_001353131) -398 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr20-90 chr20 25309872 25310082 + 36.4 0.000 intron (NM_001042472, intron 6 of 12) intron (NM_001042472, intron 6 of 12) 61892 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr9-390 chr9 124309673 124309883 + 36.4 0.000 intron (NM_001166169, intron 2 of 9) intron (NM_001166169, intron 2 of 9) 17358 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr2-397 chr2 100197748 100197958 + 36.4 0.000 Intergenic Intergenic -10401 NR_103730 150577 Hs.434127 NM_001102655 ENSG00000232084 LINC01104 - long intergenic non-protein coding RNA 1104 ncRNA chr14-80 chr14 35826667 35826877 + 36.4 0.000 intron (NM_032352, intron 1 of 9) CpG 434 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr9-96 chr9 111631272 111631482 + 36.4 0.000 promoter-TSS (NR_037148) promoter-TSS (NR_037148) 25 NR_037148 548645 Hs.534196 NM_001015882 ENSG00000059769 DNAJC25 bA16L21.2.1 DnaJ heat shock protein family (Hsp40) member C25 protein-coding chr14-107 chr14 21384308 21384518 + 36.4 0.000 promoter-TSS (NM_007192) promoter-TSS (NM_007192) -394 NM_007192 11198 Hs.213724 NM_007192 ENSG00000092201 SUPT16H CDC68|FACTP140|SPT16|SPT16/CDC68 SPT16 homolog, facilitates chromatin remodeling subunit protein-coding chr16-230 chr16 85553469 85553679 + 36.4 0.000 Intergenic CpG -57835 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr4-76 chr4 80073123 80073333 + 36.4 0.000 promoter-TSS (NM_001145794) promoter-TSS (NM_001145794) 1 NM_058172 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF ANTXR cell adhesion molecule 2 protein-coding chr10-343 chr10 132532864 132533074 + 36.4 0.000 intron (NR_158224, intron 1 of 3) intron (NR_158224, intron 1 of 3) 3954 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr5-255 chr5 140132029 140132239 + 36.4 0.000 Intergenic Intergenic 6197 NM_001007189 492311 Hs.696360 NM_001007189 ENSG00000182700 IGIP C5orf53 IgA inducing protein protein-coding chr22-268 chr22 26322659 26322869 + 36.4 0.000 intron (NM_001184776, intron 9 of 14) intron (NM_001184776, intron 9 of 14) -106496 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr17-356 chr17 4230291 4230501 + 36.4 0.000 intron (NR_047571, intron 2 of 23) intron (NR_047571, intron 2 of 23) 33451 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chr7-197 chr7 66100031 66100241 + 36.4 0.000 Intergenic Intergenic -14682 NM_001040648 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr7-203 chr7 47453573 47453783 + 36.4 0.000 intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 11125 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr7-137 chr7 139341581 139341791 + 36.4 0.000 intron (NM_001244584, intron 1 of 10) intron (NM_001244584, intron 1 of 10) 349 NM_197964 154791 Hs.718441 NM_197964 ENSG00000164898 FMC1 C7orf55|HSPC268 formation of mitochondrial complex V assembly factor 1 homolog protein-coding chr17-154 chr17 81346364 81346574 + 36.4 0.000 Intergenic CpG -37221 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr19-324 chr19 55166542 55166752 + 36.4 0.000 promoter-TSS (NM_001256714) promoter-TSS (NM_001256714) -34 NM_001256715 352909 Hs.351582 NM_178837 ENSG00000167646 DNAAF3 C19orf51|CILD2|DAB1|PCD|PF22 dynein axonemal assembly factor 3 protein-coding chr5-77 chr5 77776182 77776392 + 36.4 0.000 promoter-TSS (NM_001297740) promoter-TSS (NM_001297740) 52 NM_001297738 6902 Hs.291212 NM_004607 ENSG00000171530 TBCA - tubulin folding cofactor A protein-coding chr8-162 chr8 63220412 63220622 + 36.4 0.000 Intergenic Intergenic 51514 NM_001277818 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 - YTH N6-methyladenosine RNA binding protein 3 protein-coding chr11-447 chr11 128453554 128453764 + 36.4 0.000 Intergenic L2b|LINE|L2 68651 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr9-594 chr9 79325631 79325841 + 36.3 0.000 Intergenic Intergenic -180070 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr7-425 chr7 94632434 94632644 + 36.3 0.000 intron (NM_001346717, intron 1 of 9) intron (NM_001346717, intron 1 of 9) 23594 NM_003919 8910 Hs.371199 NM_003919 ENSG00000127990 SGCE DYT11|ESG|epsilon-SG sarcoglycan epsilon protein-coding chr15-66 chr15 65869413 65869623 + 36.3 0.000 promoter-TSS (NM_001206836) promoter-TSS (NM_001206836) 27 NM_001206836 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr11-199 chr11 65860365 65860575 + 36.3 0.000 promoter-TSS (NM_001350283) promoter-TSS (NM_001350283) 37 NM_001350283 80198 Hs.288798 NM_025128 ENSG00000172732 MUS81 SLX3 MUS81 structure-specific endonuclease subunit protein-coding chr2-409 chr2 105239987 105240197 + 36.3 0.000 Intergenic Intergenic -1651 NM_007227 11250 Hs.590903 NM_007227 ENSG00000135973 GPR45 PSP24|PSP24(ALPHA)|PSP24A G protein-coupled receptor 45 protein-coding chr7-297 chr7 128343722 128343932 + 36.3 0.000 promoter-TSS (NM_001166135) promoter-TSS (NM_001166135) 81 NM_018077 55131 Hs.274263 NM_018077 ENSG00000106344 RBM28 ANES RNA binding motif protein 28 protein-coding chr10-166 chr10 97689639 97689849 + 36.3 0.000 Intergenic Intergenic -2503 NM_021732 60370 Hs.23918 NM_021732 ENSG00000119986 AVPI1 PP5395|VIP32|VIT32 arginine vasopressin induced 1 protein-coding chr1-545 chr1 212612663 212612873 + 36.3 0.000 intron (NM_001206484, intron 2 of 4) intron (NM_001206484, intron 2 of 4) -2250 NM_001206486 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chr13-39 chr13 110615372 110615582 + 36.3 0.000 promoter-TSS (NM_001242883) promoter-TSS (NM_001242883) 17 NR_040104 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr9-256 chr9 114156724 114156934 + 36.3 0.000 intron (NM_032888, intron 1 of 60) intron (NM_032888, intron 1 of 60) 1292 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr10-207 chr10 68988667 68988877 + 36.3 0.000 promoter-TSS (NM_015634) promoter-TSS (NM_015634) -31 NM_015634 26128 Hs.279580 NM_015634 ENSG00000198954 KIF1BP KBP|KIAA1279|TTC20 KIF1 binding protein protein-coding chr14-103 chr14 20343296 20343506 + 36.3 0.000 promoter-TSS (NM_005484) promoter-TSS (NM_005484) 10 NR_002312 85495 Hs.613102 NR_002312 ENSG00000277209 RPPH1 H1RNA|RPPH1-1 ribonuclease P RNA component H1 ncRNA chr7-238 chr7 47253828 47254038 + 36.3 0.000 Intergenic Intergenic 210870 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr5-311 chr5 95760438 95760648 + 36.3 0.000 intron (NM_014899, intron 6 of 11) intron (NM_014899, intron 6 of 11) -28441 NM_001349303 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr5-268 chr5 34717701 34717911 + 36.3 0.000 intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 30247 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr4-328 chr4 87589520 87589730 + 36.3 0.000 Intergenic LTR26|LTR|ERV1 -18904 NM_014208 1834 Hs.678914 NM_014208 ENSG00000152591 DSPP DFNA39|DGI1|DMP3|DPP|DSP dentin sialophosphoprotein protein-coding chr3-561 chr3 191070243 191070453 + 36.3 0.000 Intergenic LTR16A|LTR|ERVL -128893 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding chr4-333 chr4 113835050 113835260 + 36.3 0.000 Intergenic MIR|SINE|MIR -73228 NM_172127 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr20-60 chr20 31739000 31739210 + 36.3 0.000 promoter-TSS (NM_012112) promoter-TSS (NM_012112) -185 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr19-340 chr19 11738996 11739206 + 36.3 0.000 promoter-TSS (NM_017507) promoter-TSS (NM_017507) -155 NM_017507 55552 Hs.142167 NM_017507 ENSG00000197933 ZNF823 HSZFP36 zinc finger protein 823 protein-coding chr5-111 chr5 126776827 126777037 + 36.3 0.000 promoter-TSS (NM_001198557) promoter-TSS (NM_001198557) -204 NM_001198557 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr1-261 chr1 28581861 28582071 + 36.3 0.000 promoter-TSS (NR_003035) promoter-TSS (NR_003035) -93 NR_146381 85028 Hs.632377 NR_024127 ENSG00000197989 SNHG12 ASLNC04080|C1orf79|LINC00100|NCRNA00100|PNAS-123 small nucleolar RNA host gene 12 ncRNA chr19-343 chr19 42244645 42244855 + 36.3 0.000 Intergenic Intergenic -2148 NM_019884 2931 Hs.466828 NM_019884 ENSG00000105723 GSK3A - glycogen synthase kinase 3 alpha protein-coding chr19-321 chr19 4058459 4058669 + 36.3 0.000 intron (NM_015898, intron 1 of 2) intron (NM_015898, intron 1 of 2) 6965 NM_001317990 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr14-104 chr14 23007035 23007245 + 36.2 0.000 intron (NM_001130706, intron 1 of 7) CpG 3003 NM_001130706 60686 Hs.255874 NM_021944 ENSG00000100802 C14orf93 RTFC chromosome 14 open reading frame 93 protein-coding chr16-144 chr16 680103 680313 + 36.2 0.000 promoter-TSS (NM_005861) promoter-TSS (NM_005861) -202 NM_001293197 10273 Hs.592081 NM_005861 ENSG00000103266 STUB1 CHIP|HSPABP2|NY-CO-7|SCA48|SCAR16|SDCCAG7|UBOX1 STIP1 homology and U-box containing protein 1 protein-coding chr5-105 chr5 78360405 78360615 + 36.2 0.000 promoter-TSS (NM_001290229) promoter-TSS (NM_001290229) 31 NR_105014 728769 Hs.586193 NR_105014 ENSG00000245556 SCAMP1-AS1 - SCAMP1 antisense RNA 1 ncRNA chr11-271 chr11 108467334 108467544 + 36.2 0.000 promoter-TSS (NM_152587) promoter-TSS (NM_152587) 90 NM_001351110 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr2-219 chr2 177212413 177212623 + 36.2 0.000 promoter-TSS (NM_001330248) promoter-TSS (NM_001330248) -107 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr15-113 chr15 100958402 100958612 + 36.2 0.000 intron (NM_024652, intron 2 of 33) intron (NM_024652, intron 2 of 33) 39150 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr14-63 chr14 65102768 65102978 + 36.2 0.000 promoter-TSS (NM_145114) promoter-TSS (NM_145114) -178 NR_073137 4149 Hs.285354 NM_002382 ENSG00000125952 MAX bHLHd4 MYC associated factor X protein-coding chr8-118 chr8 23177256 23177466 + 36.2 0.000 Intergenic Intergenic -13334 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr9-193 chr9 114349047 114349257 + 36.2 0.000 intron (NM_001317950, intron 15 of 21) intron (NM_001317950, intron 15 of 21) 19363 NM_000608 5005 Hs.719954 NM_000608 ENSG00000228278 ORM2 AGP-B|AGP-B'|AGP2 orosomucoid 2 protein-coding chr9-143 chr9 129178215 129178425 + 36.2 0.000 promoter-TSS (NM_203434) promoter-TSS (NM_203434) -59 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr9-207 chr9 34049277 34049487 + 36.2 0.000 promoter-TSS (NM_018449) promoter-TSS (NM_018449) -183 NM_001370059 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr11-210 chr11 65652771 65652981 + 36.2 0.000 TTS (NM_001243985) TTS (NM_001243985) 3684 NR_039709 100616284 NR_039709 ENSG00000265874 MIR4489 mir-4489 microRNA 4489 ncRNA chr12-109 chr12 82686820 82687030 + 36.2 0.000 promoter-TSS (NM_001320321) promoter-TSS (NM_001320321) 19 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr18-29 chr18 31943026 31943236 + 36.2 0.000 promoter-TSS (NM_014939) promoter-TSS (NM_014939) -3 NM_014939 22878 Hs.202001 NM_014939 ENSG00000153339 TRAPPC8 GSG1|HsT2706|KIAA1012|TRS85 trafficking protein particle complex 8 protein-coding chr16-325 chr16 58515474 58515684 + 36.2 0.000 promoter-TSS (NM_024860) promoter-TSS (NM_024860) 100 NR_134583 79918 Hs.731691 NM_024860 ENSG00000103037 SETD6 - SET domain containing 6, protein lysine methyltransferase protein-coding KI270337.1-1 KI270337.1 335 545 + 36.2 0.000 NA NA NA NA chr16-68 chr16 57245057 57245267 + 36.2 0.000 promoter-TSS (NM_012106) promoter-TSS (NM_012106) -97 NM_012106 23568 Hs.632873 NM_012106 ENSG00000102931 ARL2BP BART|BART1|RP66 ADP ribosylation factor like GTPase 2 binding protein protein-coding chr2-343 chr2 84516292 84516502 + 36.2 0.000 promoter-TSS (NM_001370) promoter-TSS (NM_001370) -58 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chr19-325 chr19 15125792 15126002 + 36.2 0.000 promoter-TSS (NM_006844) promoter-TSS (NM_006844) -111 NM_006844 10994 Hs.78880 NM_006844 ENSG00000105135 ILVBL 209L8|AHAS|HACL1L|ILV2H ilvB acetolactate synthase like protein-coding chr9-290 chr9 32552371 32552581 + 36.2 0.000 TTS (NM_002493) TTS (NM_002493) 110 NM_005802 10210 Hs.589962 NM_005802 ENSG00000197579 TOPORS LUN|P53BP3|RP31|TP53BPL TOP1 binding arginine/serine rich protein protein-coding chr12-120 chr12 752372 752582 + 36.2 0.000 promoter-TSS (NM_014823) promoter-TSS (NM_014823) -102 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr3-179 chr3 9649226 9649436 + 36.2 0.000 promoter-TSS (NM_022485) promoter-TSS (NM_022485) -174 NM_022485 64419 Hs.475382 NM_022485 ENSG00000163719 MTMR14 C3orf29 myotubularin related protein 14 protein-coding chr6-186 chr6 157669795 157670005 + 36.2 0.000 intron (NM_153746, intron 8 of 8) intron (NM_153746, intron 8 of 8) 140768 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr10-203 chr10 132628085 132628295 + 36.2 0.000 intron (NM_005539, intron 2 of 15) intron (NM_005539, intron 2 of 15) -53085 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr10-542 chr10 125411817 125412027 + 36.2 0.000 Intergenic L1ME1|LINE|L1 -162449 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr7-199 chr7 30459720 30459930 + 36.2 0.000 intron (NM_006092, intron 2 of 13) intron (NM_006092, intron 2 of 13) 18959 NM_006092 10392 Hs.405153 NM_006092 ENSG00000106100 NOD1 CARD4|CLR7.1|NLRC1 nucleotide binding oligomerization domain containing 1 protein-coding chr19-251 chr19 12440919 12441129 + 36.2 0.000 promoter-TSS (NM_005815) promoter-TSS (NM_005815) -3 NM_005815 10224 Hs.636894 NM_005815 ENSG00000180855 ZNF443 ZK1 zinc finger protein 443 protein-coding chr12-132 chr12 124457571 124457781 + 36.2 0.000 intron (NM_001077261, intron 7 of 47) intron (NM_001077261, intron 7 of 47) 109936 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr1-468 chr1 182290425 182290635 + 36.1 0.000 intron (NR_104175, intron 2 of 2) intron (NR_104175, intron 2 of 2) 23531 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr1-259 chr1 201170723 201170933 + 36.1 0.000 intron (NM_001288564, intron 1 of 5) CpG 754 NM_001288564 252839 Hs.181444 NM_016456 ENSG00000116857 TMEM9 DERM4|TMEM9A transmembrane protein 9 protein-coding chr3-100 chr3 46979519 46979729 + 36.1 0.000 promoter-TSS (NM_015175) promoter-TSS (NM_015175) -59 NM_015175 23218 Hs.437043 NM_015175 ENSG00000160796 NBEAL2 BDPLT4|GPS neurobeachin like 2 protein-coding chr5-156 chr5 137470800 137471010 + 36.1 0.000 intron (NM_004598, intron 2 of 10) MIR|SINE|MIR 28421 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr12-264 chr12 121924749 121924959 + 36.1 0.000 intron (NM_001178003, intron 3 of 17) intron (NM_001178003, intron 3 of 17) 6262 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr13-80 chr13 20258508 20258718 + 36.1 0.000 Intergenic MIR3|SINE|MIR -26218 NM_001110221 10804 Hs.511757 NM_006783 ENSG00000121742 GJB6 CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2 gap junction protein beta 6 protein-coding chr17-156 chr17 81057300 81057510 + 36.1 0.000 intron (NM_001144888, intron 2 of 13) intron (NM_001144888, intron 2 of 13) 22254 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding chr5-285 chr5 159184977 159185187 + 36.1 0.000 intron (NM_001199383, intron 3 of 10) L4_A_Mam|LINE|RTE-X 22566 NM_001199382 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chr5-132 chr5 55534826 55535036 + 36.1 0.000 promoter-TSS (NM_003711) promoter-TSS (NM_003711) 33 NM_003711 8611 Hs.696231 NM_003711 ENSG00000067113 PLPP1 LLP1a|LPP1|PAP-2a|PAP2|PPAP2A phospholipid phosphatase 1 protein-coding chr8-47 chr8 66613305 66613515 + 36.1 0.000 promoter-TSS (NM_001080416) promoter-TSS (NM_001080416) -192 NM_001080416 4603 Hs.445898 NM_001080416 ENSG00000185697 MYBL1 A-MYB|AMYB MYB proto-oncogene like 1 protein-coding chr20-179 chr20 58349699 58349909 + 36.1 0.000 intron (NM_020673, intron 3 of 6) L1M4a1|LINE|L1 -39315 NM_004738 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr3-336 chr3 105275147 105275357 + 36.1 0.000 Intergenic L1MEf|LINE|L1 -91461 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr13-96 chr13 113178100 113178310 + 36.1 0.000 exon (NM_001320656, exon 14 of 15) exon (NM_001320656, exon 14 of 15) 19551 NM_001256134 8858 Hs.1011 NM_003891 ENSG00000126231 PROZ PZ protein Z, vitamin K dependent plasma glycoprotein protein-coding chr12-249 chr12 124793175 124793385 + 36.1 0.000 intron (NM_001367987, intron 7 of 9) intron (NM_001367987, intron 7 of 9) 46391 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr9-148 chr9 107282936 107283146 + 36.1 0.000 promoter-TSS (NM_002874) promoter-TSS (NM_002874) -238 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr12-79 chr12 132762097 132762307 + 36.1 0.000 promoter-TSS (NM_015114) promoter-TSS (NM_015114) -370 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr13-50 chr13 75537884 75538094 + 36.1 0.000 promoter-TSS (NM_203495) promoter-TSS (NM_203495) -117 NM_001287392 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding KI270830.1-1 KI270830.1 16523 16733 + 36.1 0.000 NA NA NA NA chr19-634 chr19 2950658 2950868 + 36.1 0.000 Intergenic CpG -5792 NM_021217 58492 Hs.38004 NM_021217 ENSG00000175691 ZNF77 pT1 zinc finger protein 77 protein-coding chr9-272 chr9 124771398 124771608 + 36.1 0.000 promoter-TSS (NM_033334) promoter-TSS (NM_033334) -192 NM_033334 2649 Hs.20131 NM_001489 ENSG00000148200 NR6A1 CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR nuclear receptor subfamily 6 group A member 1 protein-coding chrX-36 chrX 56813552 56813762 + 36.1 0.000 intron (NM_001348129, intron 2 of 2) intron (NM_001348129, intron 2 of 2) -76073 NR_002308 442454 Hs.663220 NR_002308 UQCRBP1 - ubiquinol-cytochrome c reductase binding protein pseudogene 1 pseudo chr4-154 chr4 84691359 84691569 + 36.1 0.000 intron (NM_014991, intron 60 of 67) intron (NM_014991, intron 60 of 67) 108337 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr17-130 chr17 40318107 40318317 + 36.1 0.000 promoter-TSS (NM_001145302) promoter-TSS (NM_001145302) -33 NM_001145302 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding chr2-610 chr2 125405843 125406053 + 36.1 0.000 Intergenic MER44B|DNA|TcMar-Tigger 712037 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr3-77 chr3 49940128 49940338 + 36.1 0.000 promoter-TSS (NM_005777) promoter-TSS (NM_005777) 83 NM_001349190 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr2-402 chr2 232568222 232568432 + 36.1 0.000 intron (NM_001276336, intron 6 of 6) intron (NM_001276336, intron 6 of 6) 17521 NM_001330202 9470 Hs.292026 NM_004846 ENSG00000135930 EIF4E2 4E-LP|4EHP|EIF4EL3|IF4e|h4EHP eukaryotic translation initiation factor 4E family member 2 protein-coding chr6-251 chr6 16724038 16724248 + 36.1 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 36041 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr22-117 chr22 19447593 19447803 + 36.1 0.000 exon (NM_001166242, exon 1 of 3) exon (NM_001166242, exon 1 of 3) 534 NM_173793 128977 Hs.659565 NM_173793 ENSG00000242259 C22orf39 - chromosome 22 open reading frame 39 protein-coding chr7-286 chr7 127905818 127906028 + 36.1 0.000 intron (NM_014390, intron 14 of 23) intron (NM_014390, intron 14 of 23) -91586 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr1-876 chr1 11139055 11139265 + 36.1 0.000 intron (NM_004958, intron 36 of 57) intron (NM_004958, intron 36 of 57) -4738 NR_046600 100873935 Hs.679133 NR_046600 ENSG00000225602 MTOR-AS1 - MTOR antisense RNA 1 ncRNA chr4-167 chr4 153393599 153393809 + 35.9 0.000 intron (NR_045605, intron 6 of 9) intron (NR_045605, intron 6 of 9) 49016 NM_032117 84057 Hs.294088 NM_032117 ENSG00000121211 MND1 GAJ meiotic nuclear divisions 1 protein-coding chr20-102 chr20 25223238 25223448 + 35.9 0.000 intron (NM_001247, intron 12 of 14) intron (NM_001247, intron 12 of 14) -24742 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr19-425 chr19 48325301 48325511 + 35.9 0.000 promoter-TSS (NM_001425) promoter-TSS (NM_001425) -146 NM_001425 2014 Hs.9999 NM_001425 ENSG00000142227 EMP3 YMP epithelial membrane protein 3 protein-coding chr22-131 chr22 35350900 35351110 + 35.9 0.000 Intergenic Intergenic -14206 NR_106717 102464824 NR_106717 ENSG00000274280 MIR6069 hsa-mir-6069 microRNA 6069 ncRNA chr7-236 chr7 100100595 100100805 + 35.9 0.000 promoter-TSS (NM_004722) promoter-TSS (NM_004722) 80 NM_182776 4176 Hs.438720 NM_005916 ENSG00000166508 MCM7 CDC47|MCM2|P1.1-MCM3|P1CDC47|P85MCM|PNAS146|PPP1R104 minichromosome maintenance complex component 7 protein-coding chr9-73 chr9 132354987 132355197 + 35.9 0.000 promoter-TSS (NM_001351528) promoter-TSS (NM_001351528) -106 NM_015046 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr10-289 chr10 124418314 124418524 + 35.9 0.000 intron (NM_001322970, intron 1 of 11) CpG 504 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr18-117 chr18 12744149 12744359 + 35.9 0.000 intron (NR_110763, intron 1 of 1) intron (NR_110763, intron 1 of 1) 5168 NR_110763 100996324 Hs.333275 NR_110763 LINC01882 - long intergenic non-protein coding RNA 1882 ncRNA chr19-697 chr19 38080033 38080243 + 35.9 0.000 intron (NM_015073, intron 2 of 21) intron (NM_015073, intron 2 of 21) -82958 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr19-577 chr19 3990162 3990372 + 35.9 0.000 Intergenic Intergenic -4804 NM_001961 1938 Hs.515070 NM_001961 ENSG00000167658 EEF2 EEF-2|EF-2|EF2|SCA26 eukaryotic translation elongation factor 2 protein-coding chr1-743 chr1 68916491 68916701 + 35.9 0.000 Intergenic Intergenic -139302 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr3-285 chr3 87333351 87333561 + 35.9 0.000 Intergenic MER57F|LTR|ERV1 -56872 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr1-591 chr1 171313978 171314188 + 35.9 0.000 promoter-TSS (NM_002022) promoter-TSS (NM_002022) -100 NM_002022 2329 Hs.386502 NM_002022 ENSG00000076258 FMO4 FMO2 flavin containing dimethylaniline monoxygenase 4 protein-coding chr17-256 chr17 904059 904269 + 35.9 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -5468 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr4-73 chr4 1721145 1721355 + 35.9 0.000 promoter-TSS (NM_006342) promoter-TSS (NM_006342) 73 NM_001127266 92305 Hs.518562 NM_138385 ENSG00000168936 TMEM129 D4S2561E transmembrane protein 129 protein-coding chr16-252 chr16 30571999 30572209 + 35.9 0.000 5' UTR (NM_145271, exon 1 of 3) 5' UTR (NM_145271, exon 1 of 3) 303 NM_001024683 146542 Hs.301463 NM_145271 ENSG00000229809 ZNF688 - zinc finger protein 688 protein-coding chr19-339 chr19 5690234 5690444 + 35.9 0.000 promoter-TSS (NM_033643) promoter-TSS (NM_033643) 44 NM_015414 25873 Hs.408018 NM_015414 ENSG00000130255 RPL36 L36 ribosomal protein L36 protein-coding chr10-224 chr10 102009836 102010046 + 35.9 0.000 intron (NM_024541, intron 12 of 25) intron (NM_024541, intron 12 of 25) 46232 NM_024541 79591 Hs.16004 NM_024541 ENSG00000120029 ARMH3 C10orf76 armadillo like helical domain containing 3 protein-coding chr10-236 chr10 76103441 76103651 + 35.9 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 320785 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr4-70 chr4 47914533 47914743 + 35.9 0.000 promoter-TSS (NM_001278624) promoter-TSS (NM_001278624) 6 NM_152995 152518 Hs.646325 NM_152995 ENSG00000170448 NFXL1 CDZFP|HOZFP|OZFP|URCC5 nuclear transcription factor, X-box binding like 1 protein-coding chr5-245 chr5 33736522 33736732 + 35.9 0.000 intron (NM_001324512, intron 3 of 21) intron (NM_001324512, intron 3 of 21) 155363 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chr17-353 chr17 81507477 81507687 + 35.9 0.000 Intergenic AluJb|SINE|Alu 5217 NM_001614 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr10-381 chr10 108911834 108912044 + 35.8 0.000 Intergenic Intergenic -842646 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr11-535 chr11 69041093 69041303 + 35.8 0.000 Intergenic MER21C|LTR|ERVL -7734 NM_139075 219931 Hs.131851 NM_139075 ENSG00000162341 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding chr8-92 chr8 140615788 140615998 + 35.8 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 19740 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr12-133 chr12 949452 949662 + 35.8 0.000 intron (NR_123713, intron 1 of 13) CpG 137 NM_134424 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr2-427 chr2 158841969 158842179 + 35.8 0.000 Intergenic Intergenic 46757 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr14-76 chr14 75453265 75453475 + 35.8 0.000 intron (NM_130469, intron 2 of 3) intron (NM_130469, intron 2 of 3) 21236 NM_001135049 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chr2-388 chr2 161123341 161123551 + 35.8 0.000 Intergenic Intergenic -13509 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr9-519 chr9 129968666 129968876 + 35.8 0.000 intron (NM_001363755, intron 4 of 15) intron (NM_001363755, intron 4 of 15) 74418 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr13-131 chr13 30569995 30570205 + 35.8 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) 47487 NM_001370340 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr1-780 chr1 10253854 10254064 + 35.8 0.000 intron (NM_001365953, intron 2 of 20) intron (NM_001365953, intron 2 of 20) 23195 NM_001365953 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr10-125 chr10 68721021 68721231 + 35.8 0.000 promoter-TSS (NM_001282960) promoter-TSS (NM_001282960) -113 NM_001282960 55749 Hs.49853 NM_018237 ENSG00000060339 CCAR1 - cell division cycle and apoptosis regulator 1 protein-coding chr15-77 chr15 70494957 70495167 + 35.8 0.000 Intergenic Intergenic 10866 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr8-243 chr8 16416272 16416482 + 35.8 0.000 Intergenic Intergenic -223586 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr6-239 chr6 81562304 81562514 + 35.8 0.000 Intergenic Intergenic 190272 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr11-158 chr11 12110265 12110475 + 35.8 0.000 promoter-TSS (NM_001282668) promoter-TSS (NM_001282668) -206 NM_001282668 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr9-334 chr9 37487195 37487405 + 35.8 0.000 intron (NM_001282766, intron 2 of 12) intron (NM_001282766, intron 2 of 12) 1352 NM_022490 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr10-241 chr10 110512709 110512919 + 35.8 0.000 Intergenic Intergenic 14907 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr1-304 chr1 27830618 27830828 + 35.7 0.000 promoter-TSS (NM_014110) promoter-TSS (NM_014110) -59 NM_138558 5511 Hs.533474 NM_002713 ENSG00000117751 PPP1R8 ARD-1|ARD1|NIPP-1|NIPP1|PRO2047 protein phosphatase 1 regulatory subunit 8 protein-coding chr18-111 chr18 76477078 76477288 + 35.7 0.000 intron (NM_014643, intron 1 of 6) intron (NM_014643, intron 1 of 6) -14469 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr12-117 chr12 48157494 48157704 + 35.7 0.000 promoter-TSS (NM_001319296) promoter-TSS (NM_001319296) -84 NM_024095 140461 Hs.432699 NM_024095 ENSG00000177981 ASB8 PP14212 ankyrin repeat and SOCS box containing 8 protein-coding chr17-345 chr17 30906339 30906549 + 35.7 0.000 promoter-TSS (NM_024683) promoter-TSS (NM_024683) -206 NM_024683 79736 Hs.317340 NM_024683 ENSG00000172171 TEFM C17orf42 transcription elongation factor, mitochondrial protein-coding chr1-188 chr1 150515494 150515704 + 35.7 0.000 promoter-TSS (NR_051960) promoter-TSS (NR_051960) -158 NR_051960 100874054 Hs.576460 NR_051960 ENSG00000228126 FALEC FAL1|LINC00568|ncRNA-a1 focally amplified long non-coding RNA in epithelial cancer ncRNA chr2-360 chr2 69298376 69298586 + 35.7 0.000 Intergenic Intergenic 88746 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr14-164 chr14 64421256 64421466 + 35.7 0.000 intron (NM_005956, intron 8 of 27) intron (NM_005956, intron 8 of 27) 33008 NM_005956 4522 Hs.652308 NM_005956 ENSG00000100714 MTHFD1 CIMAH|MTHFC|MTHFD methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 protein-coding chr1-532 chr1 221742080 221742290 + 35.7 0.000 promoter-TSS (NR_111940) promoter-TSS (NR_111940) -9 NR_111940 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr22-208 chr22 38260963 38261173 + 35.7 0.000 intron (NM_001195072, intron 1 of 9) intron (NM_001195072, intron 1 of 9) 11596 NM_001195071 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr4-254 chr4 107951648 107951858 + 35.7 0.000 3' UTR (NM_183075, exon 5 of 5) 3' UTR (NM_183075, exon 5 of 5) -19634 NR_125929 101929595 Hs.678014 NR_125929 ENSG00000245293 LOC101929595 - uncharacterized LOC101929595 ncRNA chr19-344 chr19 57819661 57819871 + 35.7 0.000 Intergenic CpG -4853 NM_024762 79818 Hs.560727 NM_024762 ENSG00000178935 ZNF552 - zinc finger protein 552 protein-coding chr1-221 chr1 225810092 225810302 + 35.7 0.000 promoter-TSS (NM_001291163) promoter-TSS (NM_001291163) 63 NM_001291163 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr15-145 chr15 99455056 99455266 + 35.7 0.000 Intergenic Intergenic -110256 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr2-241 chr2 121649553 121649763 + 35.7 0.000 promoter-TSS (NR_037857) promoter-TSS (NR_037857) 4 NR_037857 254128 Hs.712685 NR_037856 ENSG00000236859 NIFK-AS1 - NIFK antisense RNA 1 ncRNA chr19-351 chr19 56368074 56368284 + 35.7 0.000 promoter-TSS (NR_003127) promoter-TSS (NR_003127) 58 NR_033418 147947 Hs.467326 NM_194319 ENSG00000240225 ZNF542P ZNF542 zinc finger protein 542, pseudogene pseudo chr8-17 chr8 100722237 100722447 + 35.7 0.000 promoter-TSS (NM_002568) promoter-TSS (NM_002568) -254 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr12-63 chr12 106955680 106955890 + 35.7 0.000 promoter-TSS (NM_001319664) promoter-TSS (NM_001319664) 63 NM_001319663 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr2-87 chr2 240136240 240136450 + 35.7 0.000 promoter-TSS (NM_001163424) promoter-TSS (NM_001163424) 2 NM_138336 150678 Hs.293884 NM_138336 ENSG00000172428 COPS9 CSNAP|MYEOV2 COP9 signalosome subunit 9 protein-coding chr16-309 chr16 87388340 87388550 + 35.7 0.000 intron (NM_001282683, intron 2 of 9) intron (NM_001282683, intron 2 of 9) 3676 NM_001282683 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr1-453 chr1 212035041 212035251 + 35.7 0.000 promoter-TSS (NM_016448) promoter-TSS (NM_016448) -407 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr6-81 chr6 128883070 128883280 + 35.7 0.000 promoter-TSS (NM_001079823) promoter-TSS (NM_001079823) 34 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr20-100 chr20 14337566 14337776 + 35.7 0.000 promoter-TSS (NM_013281) promoter-TSS (NM_013281) -4 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr19-279 chr19 48322012 48322222 + 35.7 0.000 promoter-TSS (NM_001364171) promoter-TSS (NM_001364171) -146 NM_001364171 93233 Hs.112645 NM_144577 ENSG00000105479 CCDC114 CILD20 coiled-coil domain containing 114 protein-coding chr7-351 chr7 77580825 77581035 + 35.7 0.000 intron (NM_001131009, intron 2 of 16) MER5A|DNA|hAT-Charlie 42887 NM_001131009 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chr9-436 chr9 127424166 127424376 + 35.7 0.000 promoter-TSS (NM_007135) promoter-TSS (NM_007135) -103 NM_001286698 7633 Hs.522399 NM_007135 ENSG00000196152 ZNF79 pT7 zinc finger protein 79 protein-coding chr8-166 chr8 90520909 90521119 + 35.7 0.000 Intergenic HAL1|LINE|L1 85049 NR_104062 101937451 Hs.583685 NR_104062 ENSG00000253799 LINC01030 - long intergenic non-protein coding RNA 1030 ncRNA chr16-280 chr16 69849090 69849300 + 35.7 0.000 intron (NM_001270453, intron 3 of 20) intron (NM_001270453, intron 3 of 20) 10458 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr16-137 chr16 89508214 89508424 + 35.7 0.000 promoter-TSS (NM_003119) promoter-TSS (NM_003119) -69 NM_001363850 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7 matrix AAA peptidase subunit, paraplegin protein-coding chr3-78 chr3 49469986 49470196 + 35.6 0.000 promoter-TSS (NM_004393) promoter-TSS (NM_004393) -41 NM_001165928 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr19-437 chr19 10617861 10618071 + 35.6 0.000 intron (NM_001145056, intron 1 of 21) intron (NM_001145056, intron 1 of 21) -7587 NM_020428 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr9-121 chr9 133992274 133992484 + 35.6 0.000 promoter-TSS (NM_003371) promoter-TSS (NM_003371) -55 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr22-146 chr22 45549136 45549346 + 35.6 0.000 intron (NM_006487, intron 13 of 14) intron (NM_006487, intron 13 of 14) 46358 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr8-189 chr8 100238325 100238535 + 35.6 0.000 intron (NM_003114, intron 16 of 18) intron (NM_003114, intron 16 of 18) 63763 NM_001353837 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr7-178 chr7 92424525 92424735 + 35.6 0.000 intron (NR_145992, intron 5 of 9) intron (NR_145992, intron 5 of 9) 12684 NR_145992 105375396 NM_001317905 ENSG00000230927 TMBIM7P - transmembrane BAX inhibitor motif containing 7, pseudogene pseudo chr8-216 chr8 18262994 18263204 + 35.6 0.000 Intergenic LTR49-int|LTR|ERV1 41431 NM_001160174 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr2-283 chr2 27489719 27489929 + 35.6 0.000 promoter-TSS (NM_015662) promoter-TSS (NM_015662) -81 NM_015662 26160 Hs.127401 NM_015662 ENSG00000138002 IFT172 BBS20|NPHP17|RP71|SLB|SRTD10|osm-1|wim intraflagellar transport 172 protein-coding chr16-162 chr16 30527395 30527605 + 35.6 0.000 promoter-TSS (NM_024671) promoter-TSS (NM_024671) -934 NM_024671 79724 Hs.85658 NM_024671 ENSG00000169957 ZNF768 - zinc finger protein 768 protein-coding chr2-198 chr2 127637842 127638052 + 35.6 0.000 TTS (NM_001161403) TTS (NM_001161403) -7917 NM_001161415 2840 Hs.46453 NM_005291 ENSG00000144230 GPR17 - G protein-coupled receptor 17 protein-coding chr2-322 chr2 31401724 31401934 + 35.6 0.000 intron (NM_000379, intron 3 of 35) intron (NM_000379, intron 3 of 35) 12913 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr2-492 chr2 42342422 42342632 + 35.6 0.000 intron (NM_001319038, intron 2 of 2) intron (NM_001319038, intron 2 of 2) 17511 NR_134948 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr12-186 chr12 53180470 53180680 + 35.6 0.000 promoter-TSS (NM_015989) promoter-TSS (NM_015989) 71 NM_015989 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr22-47 chr22 49853574 49853784 + 35.6 0.000 promoter-TSS (NM_014838) promoter-TSS (NM_014838) -165 NM_014838 9889 Hs.475208 NM_014838 ENSG00000100426 ZBED4 - zinc finger BED-type containing 4 protein-coding chr13-105 chr13 35512617 35512827 + 35.6 0.000 intron (NM_001204197, intron 1 of 17) MLT1M|LTR|ERVL-MaLR 35973 NM_001204197 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr11-391 chr11 13440178 13440388 + 35.6 0.000 promoter-TSS (NM_001297742) promoter-TSS (NM_001297742) -4 NM_001297742 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr20-31 chr20 33686424 33686634 + 35.6 0.000 promoter-TSS (NM_005225) promoter-TSS (NM_005225) -144 NM_005225 1869 Hs.654393 NM_005225 ENSG00000101412 E2F1 E2F-1|RBAP1|RBBP3|RBP3 E2F transcription factor 1 protein-coding chr10-199 chr10 97543171 97543381 + 35.6 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) -29165 NM_001291218 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr17-171 chr17 81419452 81419662 + 35.6 0.000 intron (NM_001291324, intron 1 of 27) CpG -18779 NR_039894 100616294 NR_039894 ENSG00000266392 MIR4740 - microRNA 4740 ncRNA chr12-274 chr12 77065492 77065702 + 35.6 0.000 promoter-TSS (NM_203394) promoter-TSS (NM_203394) -28 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr7-348 chr7 1027372 1027582 + 35.6 0.000 intron (NR_134538, intron 1 of 1) CpG 892 NR_156697 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr4-119 chr4 87422593 87422803 + 35.6 0.000 5' UTR (NM_001248011, exon 1 of 7) 5' UTR (NM_001248011, exon 1 of 7) 101 NM_198038 53343 Hs.149500 NM_024047 ENSG00000170502 NUDT9 NUDT10 nudix hydrolase 9 protein-coding chr8-294 chr8 131288692 131288902 + 35.6 0.000 Intergenic MER44D|DNA|TcMar-Tigger -247888 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr4-92 chr4 48830936 48831146 + 35.6 0.000 promoter-TSS (NM_017830) promoter-TSS (NM_017830) -2 NM_017830 54940 Hs.518750 NM_017830 ENSG00000109180 OCIAD1 ASRIJ|OCIA|TPA018 OCIA domain containing 1 protein-coding chr7-450 chr7 47520434 47520644 + 35.6 0.000 intron (NM_022748, intron 2 of 30) intron (NM_022748, intron 2 of 30) -55736 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr20-17 chr20 33811174 33811384 + 35.6 0.000 promoter-TSS (NR_110623) promoter-TSS (NR_110623) -69 NM_176812 128866 Hs.472471 NM_176812 ENSG00000101421 CHMP4B C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4 charged multivesicular body protein 4B protein-coding chr17-324 chr17 16653590 16653800 + 35.6 0.000 intron (NM_020787, intron 1 of 5) CpG 155 NM_020787 57547 Hs.128078 NM_020787 ENSG00000197566 ZNF624 - zinc finger protein 624 protein-coding chr5-231 chr5 134503363 134503573 + 35.5 0.000 Intergenic Intergenic -3084 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LINC01843 - long intergenic non-protein coding RNA 1843 ncRNA chr16-143 chr16 138592 138802 + 35.5 0.000 promoter-TSS (NM_001243248) promoter-TSS (NM_001243248) 1 NM_001243248 8131 Hs.19699 NM_012075 ENSG00000103148 NPRL3 C16orf35|CGTHBA|FFEVF3|HS-40|MARE|NPR3|RMD11 NPR3 like, GATOR1 complex subunit protein-coding chr9-231 chr9 36625255 36625465 + 35.5 0.000 intron (NM_001256691, intron 6 of 15) intron (NM_001256691, intron 6 of 15) 52465 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr5-327 chr5 37771814 37772024 + 35.5 0.000 Intergenic Intergenic 62903 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr1-571 chr1 159161079 159161289 + 35.5 0.000 Intergenic Intergenic -10431 NM_001346510 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr1-412 chr1 54199948 54200158 + 35.5 0.000 promoter-TSS (NM_001353356) promoter-TSS (NM_001353356) -23 NR_148414 606495 Hs.591426 NM_001031672 ENSG00000215883 CYB5RL - cytochrome b5 reductase like protein-coding chr2-208 chr2 15591801 15592011 + 35.5 0.000 promoter-TSS (NM_004939) promoter-TSS (NM_004939) 38 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr7-258 chr7 139133506 139133716 + 35.5 0.000 promoter-TSS (NM_024926) promoter-TSS (NM_024926) -133 NM_001321742 79989 Hs.133020 NM_024926 ENSG00000105948 TTC26 DYF13|IFT56|dyf-13 tetratricopeptide repeat domain 26 protein-coding chr9-218 chr9 129835145 129835355 + 35.5 0.000 promoter-TSS (NM_016520) promoter-TSS (NM_016520) 25 NM_016520 51759 Hs.278429 NM_016520 ENSG00000136819 C9orf78 CSU2|HCA59|HSPC220|bA409K20.3 chromosome 9 open reading frame 78 protein-coding chr7-244 chr7 55130762 55130972 + 35.5 0.000 intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 21028 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr10-115 chr10 97640480 97640690 + 35.5 0.000 promoter-TSS (NM_018425) promoter-TSS (NM_018425) -101 NM_018425 55361 Hs.25300 NM_018425 ENSG00000155252 PI4K2A PI4KII|PIK42A phosphatidylinositol 4-kinase type 2 alpha protein-coding chr17-397 chr17 77412890 77413100 + 35.5 0.000 intron (NM_001293696, intron 1 of 9) L1M5|LINE|L1 7918 NM_001293696 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr11-462 chr11 33135312 33135522 + 35.5 0.000 intron (NM_001326, intron 3 of 20) intron (NM_001326, intron 3 of 20) 26063 NM_001326 1479 Hs.44402 NM_001326 ENSG00000176102 CSTF3 CSTF-77 cleavage stimulation factor subunit 3 protein-coding chr17-460 chr17 53722552 53722762 + 35.5 0.000 Intergenic LTR57|LTR|ERVL -100270 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr14-105 chr14 73851734 73851944 + 35.5 0.000 promoter-TSS (NR_163921) promoter-TSS (NR_163921) 8 NM_001371335 chr21-28 chr21 42879371 42879581 + 35.5 0.000 promoter-TSS (NM_001260477) promoter-TSS (NM_001260477) 63 NM_018669 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr1-686 chr1 232891220 232891430 + 35.5 0.000 Intergenic Intergenic -59286 NR_138025 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr10-208 chr10 73785238 73785448 + 35.5 0.000 promoter-TSS (NR_160292) promoter-TSS (NR_160292) -263 NM_001242487 23053 Hs.65135 NM_015037 ENSG00000214655 ZSWIM8 KIAA0913 zinc finger SWIM-type containing 8 protein-coding chr5-336 chr5 14036121 14036331 + 35.5 0.000 Intergenic Intergenic -91746 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr17-417 chr17 43170214 43170424 + 35.5 0.000 promoter-TSS (NM_001291572) promoter-TSS (NM_001291572) 84 NR_110868 101929767 Hs.640892 NR_110868 LOC101929767 - uncharacterized LOC101929767 ncRNA chr1-265 chr1 85708423 85708633 + 35.5 0.000 promoter-TSS (NM_001170670) promoter-TSS (NM_001170670) -95 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr12-192 chr12 53295277 53295487 + 35.5 0.000 promoter-TSS (NM_145897) promoter-TSS (NM_145897) -69 NM_145897 5204 Hs.655327 NM_002624 ENSG00000123349 PFDN5 MM-1|MM1|PFD5 prefoldin subunit 5 protein-coding chr8-434 chr8 47627748 47627958 + 35.5 0.000 intron (NM_001080394, intron 10 of 19) intron (NM_001080394, intron 10 of 19) -26235 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr16-215 chr16 89917905 89918115 + 35.5 0.000 5' UTR (NM_002386, exon 1 of 1) 5' UTR (NM_002386, exon 1 of 1) 131 NM_002386 4157 Hs.513829 NM_002386 ENSG00000258839 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor protein-coding chr11-521 chr11 68269768 68269978 + 35.5 0.000 intron (NM_022338, intron 1 of 3) intron (NM_022338, intron 1 of 3) 2100 NM_022338 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr3-196 chr3 179147895 179148105 + 35.5 0.000 promoter-TSS (NR_125401) promoter-TSS (NR_125401) -27 NR_125401 101928739 Hs.434553 NR_125401 ENSG00000229102 LOC101928739 - uncharacterized LOC101928739 ncRNA chr4-122 chr4 182238472 182238682 + 35.5 0.000 Intergenic L2b|LINE|L2 -4825 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr1-305 chr1 31798598 31798808 + 35.5 0.000 intron (NM_001281987, intron 7 of 15) intron (NM_001281987, intron 7 of 15) 17348 NM_001281988 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chr1-159 chr1 156500849 156501059 + 35.5 0.000 promoter-TSS (NM_005920) promoter-TSS (NM_005920) -179 NM_005920 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr14-135 chr14 90828159 90828369 + 35.5 0.000 Intergenic Intergenic -11834 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr7-301 chr7 64903220 64903430 + 35.5 0.000 promoter-TSS (NM_021148) promoter-TSS (NM_021148) 83 NM_021148 10793 Hs.520889 NM_021148 ENSG00000198039 ZNF273 HZF9 zinc finger protein 273 protein-coding chr19-455 chr19 58519745 58519955 + 35.5 0.000 promoter-TSS (NM_001316978) promoter-TSS (NM_001316978) -40 NM_001316979 84878 Hs.515662 NM_032792 ENSG00000119574 ZBTB45 ZNF499 zinc finger and BTB domain containing 45 protein-coding chr10-402 chr10 50325505 50325715 + 35.5 0.000 intron (NM_147156, intron 8 of 10) intron (NM_147156, intron 8 of 10) -77000 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr7-312 chr7 55132789 55132999 + 35.3 0.000 intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 23055 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr10-210 chr10 93437339 93437549 + 35.3 0.000 intron (NM_013451, intron 3 of 53) intron (NM_013451, intron 3 of 53) 44890 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr2-633 chr2 200713133 200713343 + 35.3 0.000 non-coding (NR_037886, exon 3 of 3) non-coding (NR_037886, exon 3 of 3) 17515 NR_135011 107161151 Hs.148269 NR_135011 AOX3P-AOX2P AOX3/AOX3L1 AOX3P-AOX2P readthrough, transcribed pseudogene pseudo chr15-143 chr15 96421328 96421538 + 35.3 0.000 Intergenic Intergenic 87668 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr22-227 chr22 21713096 21713306 + 35.3 0.000 intron (NM_013313, intron 1 of 4) L1MB3|LINE|L1 22593 NM_013313 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr4-345 chr4 82268658 82268868 + 35.3 0.000 Intergenic Intergenic 105228 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr11-663 chr11 32034241 32034451 + 35.3 0.000 Intergenic Intergenic 6972 NR_120527 100506675 Hs.446169 NR_120526 ENSG00000254584 LOC100506675 - uncharacterized LOC100506675 ncRNA chr10-216 chr10 126867645 126867855 + 35.3 0.000 Intergenic MIRc|SINE|MIR -37659 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr7-216 chr7 55245341 55245551 + 35.3 0.000 intron (NR_110426, intron 2 of 3) intron (NR_110426, intron 2 of 3) 10189 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr21-53 chr21 43758249 43758459 + 35.3 0.000 3' UTR (NM_001331030, exon 10 of 10) 3' UTR (NM_001331030, exon 10 of 10) 16868 NM_001331030 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr9-151 chr9 132214095 132214305 + 35.3 0.000 intron (NM_032536, intron 3 of 7) intron (NM_032536, intron 3 of 7) 52142 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr1-566 chr1 41003727 41003937 + 35.3 0.000 intron (NR_125440, intron 12 of 17) MLT1H2|LTR|ERVL-MaLR -10758 NR_037868 100507178 Hs.660056 NR_037868 ENSG00000281207 SLFNL1-AS1 - SLFNL1 antisense RNA 1 ncRNA chr5-178 chr5 7868995 7869205 + 35.3 0.000 promoter-TSS (NM_001364442) promoter-TSS (NM_001364442) -48 NR_157175 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr17-124 chr17 1488130 1488340 + 35.3 0.000 intron (NM_001080779, intron 1 of 31) CpG -2475 NM_001080950 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr3-260 chr3 185270615 185270825 + 35.3 0.000 Intergenic MER96|DNA|hAT-Tip100 -12221 NR_038322 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr4-37 chr4 973562 973772 + 35.3 0.000 promoter-TSS (NM_001347) promoter-TSS (NM_001347) -98 NM_001347 1609 Hs.584858 NM_001347 ENSG00000145214 DGKQ DAGK|DAGK4|DAGK7 diacylglycerol kinase theta protein-coding chr5-221 chr5 49600399 49600609 + 35.3 0.000 Intergenic BSR/Beta|Satellite|Satellite 840784 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr6-127 chr6 4732930 4733140 + 35.3 0.000 intron (NM_001368125, intron 2 of 8) intron (NM_001368125, intron 2 of 8) 26897 NM_001368125 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr5-193 chr5 36241993 36242203 + 35.3 0.000 promoter-TSS (NM_001287340) promoter-TSS (NM_001287340) -173 NM_001085411 133686 Hs.81907 NM_153013 ENSG00000152620 NADK2 C5orf33|DECRD|MNADK|NADKD1 NAD kinase 2, mitochondrial protein-coding chr2-292 chr2 96547992 96548202 + 35.3 0.000 intron (NM_001319096, intron 2 of 5) intron (NM_001319096, intron 2 of 5) 10218 NM_001319092 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr19-236 chr19 1407341 1407551 + 35.3 0.000 promoter-TSS (NM_018959) promoter-TSS (NM_018959) -140 NM_001352034 26528 Hs.222510 NM_018959 ENSG00000071626 DAZAP1 - DAZ associated protein 1 protein-coding chr5-339 chr5 95822781 95822991 + 35.3 0.000 promoter-TSS (NM_001243658) promoter-TSS (NM_001243658) -13 NM_001243659 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr20-51 chr20 35171842 35172052 + 35.3 0.000 promoter-TSS (NM_006404) promoter-TSS (NM_006404) -125 NM_006404 10544 Hs.647450 NM_006404 ENSG00000101000 PROCR CCCA|CCD41|EPCR protein C receptor protein-coding chr14-70 chr14 49620610 49620820 + 35.3 0.000 promoter-TSS (NM_001001) promoter-TSS (NM_001001) -84 NM_002408 4247 Hs.93338 NM_002408 ENSG00000168282 MGAT2 CDG2A|CDGS2|GLCNACTII|GNT-II|GNT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr7-453 chr7 151503927 151504137 + 35.3 0.000 intron (NM_005614, intron 1 of 7) intron (NM_005614, intron 1 of 7) 15863 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr1-207 chr1 156291504 156291714 + 35.3 0.000 promoter-TSS (NM_001323617) promoter-TSS (NM_001323617) -111 NM_001323617 23381 Hs.516837 NM_015327 ENSG00000198952 SMG5 EST1B|LPTS-RP1|LPTSRP1|SMG-5 SMG5 nonsense mediated mRNA decay factor protein-coding chr1-324 chr1 41448531 41448741 + 35.3 0.000 Intergenic L2b|LINE|L2 36047 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr11-183 chr11 66480388 66480598 + 35.3 0.000 promoter-TSS (NR_120586) promoter-TSS (NR_120586) 59 NM_001256670 10072 Hs.502914 NM_005700 ENSG00000254986 DPP3 DPPIII dipeptidyl peptidase 3 protein-coding chr17-230 chr17 62065915 62066125 + 35.3 0.000 promoter-TSS (NM_005121) promoter-TSS (NM_005121) -742 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr19-466 chr19 19865811 19866021 + 35.3 0.000 promoter-TSS (NM_021047) promoter-TSS (NM_021047) 34 NM_021047 56242 Hs.301059 NM_021047 ENSG00000256771 ZNF253 BMZF-1|BMZF1|ZNF411 zinc finger protein 253 protein-coding chr12-287 chr12 92899439 92899649 + 35.3 0.000 intron (NM_003566, intron 1 of 28) intron (NM_003566, intron 1 of 28) 29751 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr4-235 chr4 185222661 185222871 + 35.3 0.000 intron (NM_001317781, intron 1 of 18) MIRb|SINE|MIR 18529 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr16-172 chr16 3023843 3024053 + 35.3 0.000 promoter-TSS (NM_024339) promoter-TSS (NM_024339) -87 NM_001347704 79228 Hs.412304 NM_024339 ENSG00000131652 THOC6 WDR58|fSAP35 THO complex 6 protein-coding chr7-257 chr7 128863582 128863792 + 35.2 0.000 intron (NM_004231, intron 1 of 1) intron (NM_004231, intron 1 of 1) 831 NM_001198909 9296 Hs.78089 NM_004231 ENSG00000128524 ATP6V1F ATP6S14|VATF|Vma7 ATPase H+ transporting V1 subunit F protein-coding chr11-243 chr11 126211584 126211794 + 35.2 0.000 promoter-TSS (NM_001363516) promoter-TSS (NM_001363516) 3 NM_001144827 84881 Hs.150458 NM_032795 ENSG00000165526 RPUSD4 - RNA pseudouridine synthase D4 protein-coding chr22-196 chr22 17706534 17706744 + 35.2 0.000 promoter-TSS (NM_001270733) promoter-TSS (NM_001270733) -19 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr3-202 chr3 50088785 50088995 + 35.2 0.000 promoter-TSS (NR_036627) promoter-TSS (NR_036627) -29 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr7-353 chr7 97117496 97117706 + 35.2 0.000 5' UTR (NM_020186, exon 1 of 2) 5' UTR (NM_020186, exon 1 of 2) 1008 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr9-172 chr9 133991015 133991225 + 35.2 0.000 intron (NM_001134398, intron 1 of 29) CpG 1204 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr12-108 chr12 132687458 132687668 + 35.2 0.000 promoter-TSS (NM_006231) promoter-TSS (NM_006231) -24 NM_018663 5827 Hs.430299 NM_018663 ENSG00000176894 PXMP2 PMP22 peroxisomal membrane protein 2 protein-coding chr2-351 chr2 222959391 222959601 + 35.2 0.000 Intergenic LTR16A2|LTR|ERVL -92434 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr4-197 chr4 182929416 182929626 + 35.2 0.000 Intergenic Intergenic -12044 NM_001921 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr17-193 chr17 83083363 83083573 + 35.2 0.000 intron (NM_001363853, intron 2 of 4) intron (NM_001363853, intron 2 of 4) 2322 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr10-500 chr10 99292153 99292363 + 35.2 0.000 Intergenic Intergenic -36841 NR_144311 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr17-322 chr17 81872047 81872257 + 35.2 0.000 promoter-TSS (NM_001301243) promoter-TSS (NM_001301243) -815 NM_001301242 396 Hs.159161 NM_004309 ENSG00000141522 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor alpha protein-coding chr20-30 chr20 5119982 5120192 + 35.2 0.000 promoter-TSS (NM_182649) promoter-TSS (NM_182649) -129 NM_182649 5111 Hs.147433 NM_002592 ENSG00000132646 PCNA ATLD2 proliferating cell nuclear antigen protein-coding chr16-319 chr16 67311782 67311992 + 35.2 0.000 intron (NM_001100915, intron 2 of 15) intron (NM_001100915, intron 2 of 15) 14854 NM_001100915 146212 Hs.299127 NM_001100915 ENSG00000168676 KCTD19 - potassium channel tetramerization domain containing 19 protein-coding chr9-288 chr9 124286255 124286465 + 35.2 0.000 intron (NM_001166168, intron 1 of 9) MIR3|SINE|MIR -5611 NM_001166171 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr5-98 chr5 81972013 81972223 + 35.2 0.000 promoter-TSS (NM_001131028) promoter-TSS (NM_001131028) 95 NM_031482 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding chr2-276 chr2 46340125 46340335 + 35.2 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 42823 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr2-291 chr2 36889893 36890103 + 35.2 0.000 intron (NM_003162, intron 7 of 17) intron (NM_003162, intron 7 of 17) 76538 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr15-84 chr15 36579551 36579761 + 35.2 0.000 promoter-TSS (NM_001321757) promoter-TSS (NM_001321757) 30 NM_001321756 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr10-157 chr10 102503743 102503953 + 35.2 0.000 promoter-TSS (NM_016169) promoter-TSS (NM_016169) -114 NM_016169 51684 Hs.404089 NM_016169 ENSG00000107882 SUFU JBTS32|PRO1280|SUFUH|SUFUXL SUFU negative regulator of hedgehog signaling protein-coding chr3-233 chr3 49929839 49930049 + 35.2 0.000 promoter-TSS (NM_032355) promoter-TSS (NM_032355) 68 NM_001142501 84315 Hs.655014 NM_032355 ENSG00000164077 MON1A SAND1 MON1 homolog A, secretory trafficking associated protein-coding chr10-130 chr10 79488305 79488515 + 35.2 0.000 Intergenic Intergenic 22572 NR_136624 729815 Hs.564060 NR_136624 ENSG00000235705 LOC729815 - uncharacterized LOC729815 ncRNA chr10-178 chr10 124083832 124084042 + 35.2 0.000 intron (NM_001270765, intron 1 of 5) intron (NM_001270765, intron 1 of 5) 8469 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr1-250 chr1 39408661 39408871 + 35.2 0.000 promoter-TSS (NM_015038) promoter-TSS (NM_015038) -307 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr4-143 chr4 139301251 139301461 + 35.2 0.000 promoter-TSS (NM_001184986) promoter-TSS (NM_001184986) -122 NM_002494 4717 Hs.84549 NM_002494 ENSG00000109390 NDUFC1 KFYI NADH:ubiquinone oxidoreductase subunit C1 protein-coding chr10-76 chr10 71851232 71851442 + 35.2 0.000 promoter-TSS (NM_002778) promoter-TSS (NM_002778) -86 NM_002778 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr8-84 chr8 63168321 63168531 + 35.2 0.000 promoter-TSS (NM_001277815) promoter-TSS (NM_001277815) 16 NR_102684 101410533 Hs.163027 NR_102684 ENSG00000270673 YTHDF3-AS1 - YTHDF3 antisense RNA 1 (head to head) ncRNA chr19-218 chr19 1592825 1593035 + 35.2 0.000 promoter-TSS (NM_001281453) promoter-TSS (NM_001281453) -65 NM_001281454 53615 Hs.178728 NM_003926 ENSG00000071655 MBD3 - methyl-CpG binding domain protein 3 protein-coding chr21-32 chr21 32612463 32612673 + 35.2 0.000 promoter-TSS (NM_001350334) promoter-TSS (NM_001350334) -191 NM_001350338 110091775 Hs.5811 NM_001350338 C21orf59-TCP10L - C21orf59-TCP10L readthrough protein-coding chr19-489 chr19 9768588 9768798 + 35.2 0.000 promoter-TSS (NM_001077624) promoter-TSS (NM_001077624) 45 NM_001077624 162993 Hs.665717 NM_001077624 ENSG00000196605 ZNF846 - zinc finger protein 846 protein-coding chr3-198 chr3 49673824 49674034 + 35.2 0.000 promoter-TSS (NM_001640) promoter-TSS (NM_001640) -422 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr21-21 chr21 43789192 43789402 + 35.2 0.000 promoter-TSS (NM_003683) promoter-TSS (NM_003683) -280 NM_003683 8568 Hs.110757 NM_003683 ENSG00000160214 RRP1 D21S2056E|NNP-1|NOP52|RRP1A ribosomal RNA processing 1 protein-coding chr13-128 chr13 113491596 113491806 + 35.2 0.000 promoter-TSS (NM_001014283) promoter-TSS (NM_001014283) 680 NM_017905 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr12-115 chr12 112013212 112013422 + 35.2 0.000 promoter-TSS (NR_122119) promoter-TSS (NR_122119) -31 NM_001034025 10961 Hs.75841 NM_006817 ENSG00000089248 ERP29 C12orf8|ERp28|ERp31|HEL-S-107|PDI-DB|PDIA9 endoplasmic reticulum protein 29 protein-coding chr3-474 chr3 159733517 159733727 + 35.2 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 34990 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr17-373 chr17 4555435 4555645 + 35.2 0.000 promoter-TSS (NM_001105538) promoter-TSS (NM_001105538) -154 NM_001105538 10514 Hs.22824 NM_014520 ENSG00000132382 MYBBP1A P160|PAP2|Pol5 MYB binding protein 1a protein-coding chr5-471 chr5 120293883 120294093 + 35.2 0.000 Intergenic Intergenic -170290 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr14-79 chr14 105364326 105364536 + 35.1 0.000 intron (NM_015197, intron 4 of 23) CpG -34107 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding chr17-268 chr17 77472497 77472707 + 35.1 0.000 intron (NM_001293698, intron 1 of 9) intron (NM_001293698, intron 1 of 9) -2641 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr6-199 chr6 16205507 16205717 + 35.1 0.000 Intergenic Intergenic -32975 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr2-526 chr2 45755989 45756199 + 35.1 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 104419 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr22-102 chr22 46267690 46267900 + 35.1 0.000 promoter-TSS (NM_017931) promoter-TSS (NM_017931) -213 NM_017931 55020 Hs.435832 NM_017931 ENSG00000075234 TTC38 LL22NC03-5H6.5 tetratricopeptide repeat domain 38 protein-coding chr1-345 chr1 43582356 43582566 + 35.1 0.000 intron (NM_001329137, intron 9 of 34) intron (NM_001329137, intron 9 of 34) 51578 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr6-129 chr6 36423211 36423421 + 35.1 0.000 intron (NM_152990, intron 3 of 4) CpG -19451 NM_001286580 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr16-187 chr16 46831331 46831541 + 35.1 0.000 promoter-TSS (NR_145835) promoter-TSS (NR_145835) -256 NM_001348660 388272 Hs.406551 NM_001001436 ENSG00000155330 C16orf87 - chromosome 16 open reading frame 87 protein-coding chr15-136 chr15 87287271 87287481 + 35.1 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu -289553 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr1-501 chr1 211675524 211675734 + 35.1 0.000 promoter-TSS (NM_001204183) promoter-TSS (NM_001204183) 1 NM_001204182 4751 Hs.153704 NM_002497 ENSG00000117650 NEK2 HsPK21|NEK2A|NLK1|PPP1R111|RP67 NIMA related kinase 2 protein-coding chr4-189 chr4 7857355 7857565 + 35.1 0.000 intron (NM_198595, intron 3 of 16) Plat_L3|LINE|CR1 14848 NM_001371090 chr5-225 chr5 169945955 169946165 + 35.1 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 34435 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr5-118 chr5 73498131 73498341 + 35.1 0.000 promoter-TSS (NM_001207) promoter-TSS (NM_001207) -189 NM_001207 689 Hs.591768 NM_001207 ENSG00000145741 BTF3 BETA-NAC|BTF3a|BTF3b|NACB basic transcription factor 3 protein-coding chr2-359 chr2 61144936 61145146 + 35.1 0.000 promoter-TSS (NM_001367069) promoter-TSS (NM_001367069) -27 NM_001143960 339804 Hs.140617 NM_001143959 ENSG00000237651 C2orf74 - chromosome 2 open reading frame 74 protein-coding chrX-65 chrX 9562983 9563193 + 35.1 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 98030 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr20-114 chr20 36516049 36516259 + 35.1 0.000 intron (NR_109939, intron 2 of 4) MLT1J|LTR|ERVL-MaLR -25365 NM_181526 10398 Hs.504687 NM_006097 ENSG00000101335 MYL9 LC20|MLC-2C|MLC2|MRLC1|MYRL2 myosin light chain 9 protein-coding chr21-56 chr21 33127321 33127531 + 35.1 0.000 Intergenic Intergenic -3726 NR_109961 101928107 Hs.382669 NR_109961 ENSG00000226527 LOC101928107 - uncharacterized LOC101928107 ncRNA chrX-29 chrX 43654752 43654962 + 35.1 0.000 promoter-TSS (NM_000240) promoter-TSS (NM_000240) -50 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr13-100 chr13 114264949 114265159 + 35.1 0.000 intron (NM_001330104, intron 15 of 16) L1MC5|LINE|L1 -8774 NR_039724 100616227 NR_039724 ENSG00000265450 MIR4502 - microRNA 4502 ncRNA chr19-348 chr19 35628797 35629007 + 35.1 0.000 promoter-TSS (NM_024321) promoter-TSS (NM_024321) -114 NM_001319113 79171 Hs.5086 NM_024321 ENSG00000126254 RBM42 - RNA binding motif protein 42 protein-coding chr22-105 chr22 38756028 38756238 + 35.1 0.000 promoter-TSS (NM_001199580) promoter-TSS (NM_001199580) -135 NM_015374 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr18-64 chr18 7946781 7946991 + 35.1 0.000 intron (NM_002845, intron 5 of 30) intron (NM_002845, intron 5 of 30) 379570 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr3-71 chr3 128052192 128052402 + 35.1 0.000 promoter-TSS (NM_013336) promoter-TSS (NM_013336) -140 NM_013336 29927 Hs.518236 NM_013336 ENSG00000058262 SEC61A1 HNFJ4|HSEC61|SEC61|SEC61A SEC61 translocon alpha 1 subunit protein-coding chr10-184 chr10 110336225 110336435 + 35.1 0.000 Intergenic Intergenic -31410 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr9-163 chr9 122940778 122940988 + 35.1 0.000 promoter-TSS (NM_012197) promoter-TSS (NM_012197) -137 NM_012197 23637 Hs.271341 NM_012197 ENSG00000011454 RABGAP1 GAPCENA|TBC1D11 RAB GTPase activating protein 1 protein-coding chr8-167 chr8 92965487 92965697 + 35.1 0.000 promoter-TSS (NM_001191036) promoter-TSS (NM_001191036) -3 NM_001191036 286144 Hs.440643 NM_001171795 ENSG00000205133 TRIQK C8orf83|PRO0845|UPF0599 triple QxxK/R motif containing protein-coding chr16-200 chr16 81314871 81315081 + 35.1 0.000 promoter-TSS (NM_022041) promoter-TSS (NM_022041) 10 NM_022041 8139 Hs.112569 NM_022041 ENSG00000261609 GAN GAN1|KLHL16 gigaxonin protein-coding chr5-213 chr5 100595616 100595826 + 35.1 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 60347 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr1-595 chr1 244599985 244600195 + 35.1 0.000 intron (NM_001130957, intron 17 of 21) intron (NM_001130957, intron 17 of 21) -52958 NR_123735 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr17-137 chr17 1456169 1456379 + 35.1 0.000 promoter-TSS (NM_016823).2 promoter-TSS (NM_016823).2 -42 NM_005206 1398 Hs.461896 NM_005206 ENSG00000167193 CRK CRKII|p38 CRK proto-oncogene, adaptor protein protein-coding chr10-140 chr10 103677094 103677304 + 35.1 0.000 intron (NM_014631, intron 6 of 13) intron (NM_014631, intron 6 of 13) 1016 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-133 chr2 28894442 28894652 + 35.1 0.000 promoter-TSS (NM_015131) promoter-TSS (NM_015131) -120 NM_015131 23160 Hs.622982 NM_015131 ENSG00000163811 WDR43 NET12|UTP5 WD repeat domain 43 protein-coding chr10-233 chr10 122063194 122063404 + 35.1 0.000 intron (NM_206861, intron 3 of 19) intron (NM_206861, intron 3 of 19) -49586 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr10-379 chr10 63700191 63700401 + 35.1 0.000 Intergenic Intergenic -178406 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr17-323 chr17 918149 918359 + 35.0 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 8622 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr12-272 chr12 62603265 62603475 + 35.0 0.000 promoter-TSS (NR_121682) promoter-TSS (NR_121682) 64 NR_121682 283416 Hs.375881 NM_175895 ENSG00000221949 LINC01465 C12orf61 long intergenic non-protein coding RNA 1465 ncRNA chr17-282 chr17 17935842 17936052 + 35.0 0.000 intron (NM_001288787, intron 1 of 13) L2c|LINE|L2 36453 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr10-153 chr10 89251854 89252064 + 35.0 0.000 promoter-TSS (NM_001288979) promoter-TSS (NM_001288979) 80 NM_001288979 3988 Hs.643030 NM_000235 ENSG00000107798 LIPA CESD|LAL lipase A, lysosomal acid type protein-coding chr1-827 chr1 181255606 181255816 + 35.0 0.000 Intergenic LTR33|LTR|ERVL 19323 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr19-365 chr19 1653035 1653245 + 35.0 0.000 promoter-TSS (NM_001351778) promoter-TSS (NM_001351778) -525 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr4-110 chr4 158210345 158210555 + 35.0 0.000 promoter-TSS (NM_018342) promoter-TSS (NM_018342) -36 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr19-330 chr19 35931516 35931726 + 35.0 0.000 Intergenic CpG -4753 NM_024509 79414 Hs.143792 NM_024509 ENSG00000126243 LRFN3 FIGLER1|SALM4 leucine rich repeat and fibronectin type III domain containing 3 protein-coding chr6-134 chr6 26351529 26351739 + 35.0 0.000 Intergenic MER44D|DNA|TcMar-Tigger -13525 NM_001197248 11118 Hs.376046 NM_007047 ENSG00000186470 BTN3A2 BT3.2|BTF4|BTN3.2|CD277 butyrophilin subfamily 3 member A2 protein-coding chrX-46 chrX 72277153 72277363 + 35.0 0.000 promoter-TSS (NM_001007) promoter-TSS (NM_001007) -10 NM_001007 6191 Hs.118076 NM_001007 ENSG00000198034 RPS4X CCG2|DXS306|RPS4|S4|SCAR|SCR10 ribosomal protein S4 X-linked protein-coding chr19-420 chr19 29687457 29687667 + 35.0 0.000 Intergenic L2a|LINE|L2 22101 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr22-166 chr22 38318387 38318597 + 35.0 0.000 promoter-TSS (NM_001894) promoter-TSS (NM_001894) -408 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr18-22 chr18 26090684 26090894 + 35.0 0.000 promoter-TSS (NM_005637) promoter-TSS (NM_005637) -142 NM_005637 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr9-346 chr9 15511029 15511239 + 35.0 0.000 promoter-TSS (NM_001317898) promoter-TSS (NM_001317898) -115 NM_001128217 11168 Hs.658434 NM_021144 ENSG00000164985 PSIP1 DFS70|LEDGF|PAIP|PSIP2|p52|p75 PC4 and SFRS1 interacting protein 1 protein-coding chr2-189 chr2 218286764 218286974 + 35.0 0.000 promoter-TSS (NM_001321427) promoter-TSS (NM_001321427) -20 NM_001321427 64114 Hs.591605 NM_022152 ENSG00000135926 TMBIM1 LFG3|MST100|MSTP100|PP1201|RECS1 transmembrane BAX inhibitor motif containing 1 protein-coding chr2-140 chr2 224585655 224585865 + 35.0 0.000 promoter-TSS (NM_003590) promoter-TSS (NM_003590) -363 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr11-536 chr11 71988081 71988291 + 35.0 0.000 intron (NM_018320, intron 5 of 8) intron (NM_018320, intron 5 of 8) -10723 NM_001039660 10068 Hs.591967 NM_005699 ENSG00000137496 IL18BP IL18BPa interleukin 18 binding protein protein-coding chr7-160 chr7 6104527 6104737 + 35.0 0.000 promoter-TSS (NM_001365764) promoter-TSS (NM_001365764) -317 NM_032172 84132 Hs.31856 NM_032172 ENSG00000106346 USP42 - ubiquitin specific peptidase 42 protein-coding chr1-540 chr1 54934909 54935119 + 35.0 0.000 Intergenic PRIMAX-int|LTR|ERV1 -45614 NM_182532 199964 Hs.663950 NM_182532 ENSG00000143001 TMEM61 - transmembrane protein 61 protein-coding chr4-121 chr4 151761024 151761234 + 35.0 0.000 promoter-TSS (NM_004564) promoter-TSS (NM_004564) -106 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr12-124 chr12 124509790 124510000 + 35.0 0.000 intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 57717 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr14-141 chr14 89955623 89955833 + 35.0 0.000 promoter-TSS (NM_145231) promoter-TSS (NM_145231) -199 NM_001008744 55775 Hs.209945 NM_018319 ENSG00000042088 TDP1 - tyrosyl-DNA phosphodiesterase 1 protein-coding chr17-204 chr17 5191861 5192071 + 35.0 0.000 promoter-TSS (NM_032530) promoter-TSS (NM_032530) -41 NR_152840 100130950 Hs.668646 NR_034082 LOC100130950 - uncharacterized LOC100130950 ncRNA chr11-457 chr11 126834219 126834429 + 34.9 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -106422 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr6-168 chr6 35919755 35919965 + 34.9 0.000 intron (NR_034069, intron 2 of 15) intron (NR_034069, intron 2 of 15) 1238 NM_003137 6732 Hs.443861 NM_003137 ENSG00000096063 SRPK1 SFRSK1 SRSF protein kinase 1 protein-coding chr8-120 chr8 22597558 22597768 + 34.9 0.000 3' UTR (NM_176871, exon 10 of 10) 3' UTR (NM_176871, exon 10 of 10) -1936 NM_173686 541565 Hs.743508 NM_173686 ENSG00000241852 C8orf58 - chromosome 8 open reading frame 58 protein-coding chr11-502 chr11 13126529 13126739 + 34.9 0.000 Intergenic Intergenic 117318 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr1-429 chr1 109877442 109877652 + 34.9 0.000 Intergenic Intergenic -33302 NM_172210 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr15-142 chr15 87369312 87369522 + 34.9 0.000 Intergenic L1PA16|LINE|L1 -207512 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr10-309 chr10 96375379 96375589 + 34.9 0.000 intron (NM_012465, intron 18 of 20) MER91B|DNA|hAT-Tip100 -16119 NM_001284322 93377 Hs.12449 NM_033207 ENSG00000197430 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding chr17-216 chr17 81926444 81926654 + 34.9 0.000 intron (NM_002359, intron 1 of 2) intron (NM_002359, intron 1 of 2) 1186 NM_002359 4097 Hs.252229 NM_002359 ENSG00000197063 MAFG hMAF MAF bZIP transcription factor G protein-coding chr2-253 chr2 127886038 127886248 + 34.9 0.000 promoter-TSS (NM_001199140) promoter-TSS (NM_001199140) -203 NM_001199140 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr2-576 chr2 241010038 241010248 + 34.9 0.000 intron (NM_001080437, intron 1 of 31) intron (NM_001080437, intron 1 of 31) 11525 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr2-117 chr2 207529817 207530027 + 34.9 0.000 promoter-TSS (NM_004379) promoter-TSS (NM_004379) -40 NR_163947 chr15-85 chr15 75043682 75043892 + 34.9 0.000 intron (NM_001301101, intron 3 of 4) X6A_LINE|LINE|CR1 501 NM_001301104 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chr2-249 chr2 239275264 239275474 + 34.9 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -30093 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chrX-32 chrX 149940298 149940508 + 34.9 0.000 intron (NR_027456, intron 1 of 11) intron (NR_027456, intron 1 of 11) 1855 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr17-276 chr17 7844731 7844941 + 34.9 0.000 intron (NM_001080424, intron 1 of 21) CpG 4919 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr19-254 chr19 40570702 40570912 + 34.9 0.000 intron (NM_020971, intron 33 of 35) intron (NM_020971, intron 33 of 35) -6066 NM_138392 92799 Hs.26506 NM_138392 ENSG00000160410 SHKBP1 PP203|Sb1 SH3KBP1 binding protein 1 protein-coding chr2-363 chr2 112481213 112481423 + 34.9 0.000 promoter-TSS (NM_153712) promoter-TSS (NM_153712) -838 NM_153712 150465 Hs.358997 NM_153712 ENSG00000114999 TTL - tubulin tyrosine ligase protein-coding chr5-374 chr5 115419881 115420091 + 34.9 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -123332 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr8-223 chr8 133036923 133037133 + 34.9 0.000 3' UTR (NM_001282964, exon 7 of 7) 3' UTR (NM_001282964, exon 7 of 7) 9553 NR_107002 102466865 NR_107002 ENSG00000276961 MIR7848 hsa-mir-7848 microRNA 7848 ncRNA chr4-217 chr4 169337641 169337851 + 34.9 0.000 Intergenic Intergenic -66790 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr1-372 chr1 47333988 47334198 + 34.9 0.000 non-coding (NR_046394, exon 1 of 5) non-coding (NR_046394, exon 1 of 5) 303 NM_016308 51727 Hs.731647 NM_016308 ENSG00000162368 CMPK1 CK|CMK|CMPK|UMK|UMP-CMPK|UMPK cytidine/uridine monophosphate kinase 1 protein-coding chr4-318 chr4 131774434 131774644 + 34.9 0.000 intron (NR_125884, intron 2 of 2) MER77|LTR|ERVL 9701 NR_125884 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr2-429 chr2 202294870 202295080 + 34.9 0.000 intron (NM_015934, intron 9 of 14) AluSg7|SINE|Alu 1924 NR_003031 692058 NR_003031 ENSG00000238317 SNORD11 HBII-95 small nucleolar RNA, C/D box 11 snoRNA chr12-190 chr12 6372501 6372711 + 34.9 0.000 intron (NM_001038, intron 2 of 12) intron (NM_001038, intron 2 of 12) -2554 NM_001270987 4055 Hs.1116 NM_002342 ENSG00000111321 LTBR D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3 lymphotoxin beta receptor protein-coding chr9-379 chr9 122931650 122931860 + 34.9 0.000 promoter-TSS (NM_020924) promoter-TSS (NM_020924) -243 NM_020924 57684 Hs.5638 NM_020924 ENSG00000171448 ZBTB26 ZNF481|bioref zinc finger and BTB domain containing 26 protein-coding chr19-661 chr19 18995939 18996149 + 34.9 0.000 intron (NR_147915, intron 9 of 11) intron (NR_147915, intron 9 of 11) 37473 NR_147913 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr2-269 chr2 204452594 204452804 + 34.9 0.000 Intergenic Intergenic -92776 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr2-232 chr2 229445056 229445266 + 34.9 0.000 intron (NM_139072, intron 8 of 12) intron (NM_139072, intron 8 of 12) -173874 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr10-278 chr10 69123477 69123687 + 34.9 0.000 promoter-TSS (NM_004896) promoter-TSS (NM_004896) -571 NM_001035260 9559 Hs.499925 NM_004896 ENSG00000122958 VPS26A HB58|Hbeta58|PEP8A|VPS26 VPS26, retromer complex component A protein-coding chr13-67 chr13 113562540 113562750 + 34.8 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -22043 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr10-147 chr10 125719433 125719643 + 34.8 0.000 promoter-TSS (NR_033847) promoter-TSS (NR_033847) 23 NR_110857 26098 Hs.468688 NM_015608 ENSG00000107938 EDRF1 C10orf137 erythroid differentiation regulatory factor 1 protein-coding chr17-494 chr17 29241029 29241239 + 34.8 0.000 Intergenic Intergenic -5723 NM_005208 1411 Hs.46275 NM_005208 ENSG00000108255 CRYBA1 CRYB1|CTRCT10 crystallin beta A1 protein-coding chr2-378 chr2 203340821 203341031 + 34.8 0.000 intron (NM_001282932, intron 1 of 9) L2a|LINE|L2 12532 NM_005759 10152 Hs.471156 NM_005759 ENSG00000138443 ABI2 ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB abl interactor 2 protein-coding chr11-414 chr11 43880668 43880878 + 34.8 0.000 promoter-TSS (NM_139178) promoter-TSS (NM_139178) -58 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr19-638 chr19 14572043 14572253 + 34.8 0.000 promoter-TSS (NM_004146) promoter-TSS (NM_004146) -82 NM_004146 4713 Hs.532853 NM_004146 ENSG00000099795 NDUFB7 B18|CI-B18 NADH:ubiquinone oxidoreductase subunit B7 protein-coding chr12-303 chr12 914454 914664 + 34.8 0.000 intron (NM_001297421, intron 7 of 9) intron (NM_001297421, intron 7 of 9) 18517 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr4-81 chr4 88284582 88284792 + 34.8 0.000 promoter-TSS (NM_152542) promoter-TSS (NM_152542) -126 NM_152542 152926 Hs.43744 NM_152542 ENSG00000163644 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent 1K protein-coding chr4-115 chr4 74157838 74158048 + 34.8 0.000 promoter-TSS (NM_001351314) promoter-TSS (NM_001351314) -165 NM_001351329 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr1-286 chr1 92080292 92080502 + 34.8 0.000 promoter-TSS (NM_183242) promoter-TSS (NM_183242) 52 NM_183242 284697 Hs.676102 NM_183242 ENSG00000189195 BTBD8 - BTB domain containing 8 protein-coding chr19-467 chr19 21396949 21397159 + 34.8 0.000 promoter-TSS (NM_001076678) promoter-TSS (NM_001076678) -79 NM_145326 284443 Hs.656558 NM_145326 ENSG00000196268 ZNF493 - zinc finger protein 493 protein-coding chr18-39 chr18 23586487 23586697 + 34.8 0.000 promoter-TSS (NM_000271) promoter-TSS (NM_000271) -86 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC|POGZ|SLC65A1 NPC intracellular cholesterol transporter 1 protein-coding chr9-126 chr9 133793102 133793312 + 34.8 0.000 intron (NM_001134398, intron 12 of 29) intron (NM_001134398, intron 12 of 29) -53252 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr5-149 chr5 69189329 69189539 + 34.8 0.000 promoter-TSS (NM_022909) promoter-TSS (NM_022909) -149 NM_022909 64946 Hs.631967 NM_022909 ENSG00000153044 CENPH - centromere protein H protein-coding chr1-433 chr1 205227748 205227958 + 34.8 0.000 promoter-TSS (NM_014858) promoter-TSS (NM_014858) -93 NM_014858 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr5-205 chr5 138575702 138575912 + 34.8 0.000 promoter-TSS (NM_004134) promoter-TSS (NM_004134) -406 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr1-575 chr1 227759579 227759789 + 34.8 0.000 intron (NR_136657, intron 2 of 3) intron (NR_136657, intron 2 of 3) 23989 NM_001323934 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr11-162 chr11 57311289 57311499 + 34.8 0.000 intron (NM_033396, intron 5 of 11) intron (NM_033396, intron 5 of 11) 13558 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr3-126 chr3 155870345 155870555 + 34.8 0.000 promoter-TSS (NM_003875) promoter-TSS (NM_003875) -200 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr8-44 chr8 19817134 19817344 + 34.8 0.000 promoter-TSS (NM_018142) promoter-TSS (NM_018142) 90 NM_001353516 55174 Hs.512627 NM_018142 ENSG00000104613 INTS10 C8orf35|INT10 integrator complex subunit 10 protein-coding KI270733.1-10 KI270733.1 149254 149464 + 34.8 0.000 NA NA NA NA chr16-150 chr16 85515162 85515372 + 34.8 0.000 Intergenic Intergenic -96142 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr22-64 chr22 20079992 20080202 + 34.8 0.000 promoter-TSS (NM_001190326) promoter-TSS (NM_001190326) -135 NM_001190326 54487 Hs.643452 NM_022720 ENSG00000128191 DGCR8 C22orf12|DGCRK6|Gy1|pasha DGCR8 microprocessor complex subunit protein-coding chr6-93 chr6 163529724 163529934 + 34.8 0.000 intron (NM_206853, intron 3 of 6) intron (NM_206853, intron 3 of 6) 115111 NM_006775 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr7-446 chr7 19404998 19405208 + 34.8 0.000 Intergenic Intergenic -259682 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chr17-127 chr17 11997361 11997571 + 34.8 0.000 promoter-TSS (NM_001303281) promoter-TSS (NM_001303281) 9 NM_001303281 7566 Hs.370473 NM_144680 ENSG00000154957 ZNF18 HDSG1|KOX11|ZKSCAN6|ZNF535|ZSCAN38|Zfp535 zinc finger protein 18 protein-coding chr3-130 chr3 111071415 111071625 + 34.8 0.000 promoter-TSS (NM_001243286) promoter-TSS (NM_001243286) -296 NM_001243286 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr22-233 chr22 40196674 40196884 + 34.8 0.000 intron (NM_015088, intron 1 of 20) intron (NM_015088, intron 1 of 20) 18854 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr17-186 chr17 81514871 81515081 + 34.6 0.000 Intergenic CpG-11886 -2177 NM_001199954 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr19-448 chr19 49867339 49867549 + 34.6 0.000 intron (NM_007254, intron 1 of 16) CpG 132 NM_007254 11284 Hs.78016 NM_007254 ENSG00000039650 PNKP AOA4|EIEE10|MCSZ|PNK polynucleotide kinase 3'-phosphatase protein-coding chr9-229 chr9 130138994 130139204 + 34.6 0.000 3' UTR (NM_001136557, exon 20 of 20) 3' UTR (NM_001136557, exon 20 of 20) 5120 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr2-116 chr2 64524161 64524371 + 34.6 0.000 promoter-TSS (NM_203437) promoter-TSS (NM_203437) -39 NM_203437 54812 Hs.655167 NM_017657 ENSG00000119844 AFTPH Nbla10388 aftiphilin protein-coding chr8-151 chr8 140459643 140459853 + 34.6 0.000 Intergenic Intergenic -1169 NM_031466 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr14-118 chr14 92794052 92794262 + 34.6 0.000 promoter-TSS (NM_005113) promoter-TSS (NM_005113) -148 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr1-200 chr1 225999341 225999551 + 34.6 0.000 promoter-TSS (NM_152608) promoter-TSS (NM_152608) -103 NM_152608 163859 Hs.520192 NM_152608 ENSG00000143751 SDE2 C1orf55|dJ671D7.1 SDE2 telomere maintenance homolog protein-coding chr16-159 chr16 89641117 89641327 + 34.6 0.000 Intergenic LTR13_|LTR|ERVK 16486 NR_046418 5119 Hs.589427 NM_002768 ENSG00000131165 CHMP1A CHMP1|PCH8|PCOLN3|PRSM1|VPS46-1|VPS46A charged multivesicular body protein 1A protein-coding chr9-475 chr9 32430818 32431028 + 34.6 0.000 intron (NM_001278352, intron 15 of 21) intron (NM_001278352, intron 15 of 21) 46280 NM_001362840 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr17-589 chr17 71412903 71413113 + 34.6 0.000 Intergenic Intergenic -210829 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr11-214 chr11 69011003 69011213 + 34.6 0.000 intron (NM_001098515, intron 1 of 2) (CGCC)n|Simple_repeat|Simple_repeat -1246 NR_120541 101928200 Hs.703759 NR_120541 ENSG00000256508 MRGPRF-AS1 - MRGPRF antisense RNA 1 ncRNA chr6-56 chr6 107459415 107459625 + 34.6 0.000 promoter-TSS (NM_020381) promoter-TSS (NM_020381) 44 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr4-232 chr4 139084145 139084355 + 34.6 0.000 promoter-TSS (NM_001276459) promoter-TSS (NM_001276459) -26 NM_006874 1998 Hs.634040 NM_006874 ENSG00000109381 ELF2 EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2 E74 like ETS transcription factor 2 protein-coding chr22-141 chr22 35629803 35630013 + 34.6 0.000 Intergenic Intergenic -6554 NM_203377 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr11-270 chr11 820115 820325 + 34.6 0.000 intron (NM_020376, intron 2 of 9) CpG-3787 1306 NM_020376 57104 Hs.654697 NM_020376 ENSG00000177666 PNPLA2 1110001C14Rik|ATGL|FP17548|PEDF-R|TTS-2.2|TTS2|iPLA2zeta patatin like phospholipase domain containing 2 protein-coding chr1-533 chr1 223701120 223701330 + 34.6 0.000 promoter-TSS (NM_001146068) promoter-TSS (NM_001146068) -368 NM_001146068 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr4-280 chr4 1130773 1130983 + 34.6 0.000 intron (NR_134676, intron 1 of 2) intron (NR_134676, intron 1 of 2) -7714 NR_033768 100379220 Hs.635208 NR_033768 ENSG00000215367 TMED11P p24a1|p24alpha1 transmembrane p24 trafficking protein 11, pseudogene pseudo chr20-156 chr20 20052566 20052776 + 34.6 0.000 promoter-TSS (NM_001278628) promoter-TSS (NM_001278628) 139 NM_015585 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr1-573 chr1 219771089 219771299 + 34.6 0.000 Intergenic Intergenic 157457 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr5-136 chr5 141475801 141476011 + 34.6 0.000 promoter-TSS (NM_032402) promoter-TSS (NM_032402) -60 NM_032403 5098 Hs.368160 NM_002588 ENSG00000240184 PCDHGC3 PC43|PCDH-GAMMA-C3|PCDH2 protocadherin gamma subfamily C, 3 protein-coding chr11-459 chr11 469732 469942 + 34.6 0.000 intron (NM_001329545, intron 2 of 10) L1MC3|LINE|L1 19558 NM_001329544 81490 Hs.12851 NM_030783 ENSG00000174915 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding chr19-564 chr19 10251857 10252067 + 34.6 0.000 promoter-TSS (NM_146388) promoter-TSS (NM_146388) -2 NM_146387 51073 Hs.279652 NM_015956 ENSG00000105364 MRPL4 CGI-28|L4mt mitochondrial ribosomal protein L4 protein-coding chr19-452 chr19 39391102 39391312 + 34.6 0.000 promoter-TSS (NR_133915) promoter-TSS (NR_133915) -101 NR_046384 54623 Hs.466714 NM_019088 ENSG00000006712 PAF1 F23149_1|PD2 PAF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr5-167 chr5 65563085 65563295 + 34.6 0.000 promoter-TSS (NM_001278927) promoter-TSS (NM_001278927) -22 NM_022145 64105 Hs.529778 NM_022145 ENSG00000123219 CENPK AF5alpha|CENP-K|FKSG14|P33|Solt centromere protein K protein-coding chr19-378 chr19 1241551 1241761 + 34.6 0.000 promoter-TSS (NM_001687) promoter-TSS (NM_001687) -95 NM_001687 513 Hs.418668 NM_001687 ENSG00000099624 ATP5F1D ATP5D|MC5DN5 ATP synthase F1 subunit delta protein-coding chr7-271 chr7 139231059 139231269 + 34.6 0.000 promoter-TSS (NM_173569) promoter-TSS (NM_173569) -73 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr13-158 chr13 28793128 28793338 + 34.6 0.000 Intergenic Intergenic -27106 NM_001366650 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr16-296 chr16 2121504 2121714 + 34.6 0.000 intron (NM_000296, intron 1 of 45) intron (NM_000296, intron 1 of 45) -11510 NR_039741 100616258 NR_039741 ENSG00000265867 MIR4516 mir-4516 microRNA 4516 ncRNA chr6-19 chr6 146543567 146543777 + 34.6 0.000 promoter-TSS (NM_006834) promoter-TSS (NM_006834) -161 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr20-149 chr20 1503720 1503930 + 34.6 0.000 Intergenic Intergenic -12405 NM_001134836 284759 Hs.721685 NM_001122962 ENSG00000196209 SIRPB2 PTPN1L|PTPNS1L3|dJ776F14.2 signal regulatory protein beta 2 protein-coding chr12-222 chr12 132622687 132622897 + 34.6 0.000 TTS (NM_006231) TTS (NM_006231) 4016 NM_174872 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr2-511 chr2 61905444 61905654 + 34.6 0.000 promoter-TSS (NM_152516) promoter-TSS (NM_152516) -93 NM_152516 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr22-158 chr22 19799445 19799655 + 34.6 0.000 intron (NM_053004, intron 7 of 7) intron (NM_053004, intron 7 of 7) 42847 NM_080646 6899 Hs.173984 NM_005992 ENSG00000184058 TBX1 CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS T-box transcription factor 1 protein-coding chr17-446 chr17 42998136 42998346 + 34.5 0.000 promoter-TSS (NR_146327) promoter-TSS (NR_146327) -32 NM_001349921 6155 Hs.514196 NM_000988 ENSG00000131469 RPL27 DBA16|L27 ribosomal protein L27 protein-coding chr7-128 chr7 1123824 1124034 + 34.5 0.000 intron (NM_001350970, intron 2 of 2) intron (NM_001350970, intron 2 of 2) 14318 NM_001318252 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr2-115 chr2 214809862 214810072 + 34.5 0.000 promoter-TSS (NM_001282548) promoter-TSS (NM_001282548) -262 NR_110292 101928103 Hs.665619 NR_110292 ENSG00000229267 SNHG31 - small nucleolar RNA host gene 31 ncRNA chr14-132 chr14 21511318 21511528 + 34.5 0.000 promoter-TSS (NM_019852) promoter-TSS (NM_019852) -83 NM_019852 56339 Hs.168799 NM_019852 ENSG00000165819 METTL3 IME4|M6A|MT-A70|Spo8|hMETTL3 methyltransferase like 3 protein-coding chr8-158 chr8 133383323 133383533 + 34.5 0.000 Intergenic Intergenic -86124 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr19-338 chr19 3459577 3459787 + 34.5 0.000 intron (NM_001245002, intron 10 of 10) G-rich|Low_complexity|Low_complexity 20843 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr3-149 chr3 49133661 49133871 + 34.5 0.000 promoter-TSS (NM_002292) promoter-TSS (NM_002292) -716 NM_002292 3913 Hs.439726 NM_002292 ENSG00000172037 LAMB2 LAMS|NPHS5 laminin subunit beta 2 protein-coding chr5-135 chr5 139403747 139403957 + 34.5 0.000 intron (NM_194296, intron 1 of 5) CpG 235 NM_194296 202051 Hs.373612 NM_194296 ENSG00000170469 SPATA24 CCDC161|T6441 spermatogenesis associated 24 protein-coding chr17-259 chr17 41786743 41786953 + 34.5 0.000 promoter-TSS (NM_001352773) promoter-TSS (NM_001352773) -80 NM_001352776 3728 Hs.514174 NM_002230 ENSG00000173801 JUP CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr5-284 chr5 142847982 142848192 + 34.5 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 20823 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr11-434 chr11 118565934 118566144 + 34.5 0.000 promoter-TSS (NM_020153) promoter-TSS (NM_020153) 37 NM_001168618 56912 Hs.533738 NM_020153 ENSG00000118096 IFT46 C11orf2|C11orf60|CFAP32 intraflagellar transport 46 protein-coding chr6-61 chr6 4136048 4136258 + 34.5 0.000 promoter-TSS (NM_001166010) promoter-TSS (NM_001166010) 81 NR_103764 100507506 Hs.665936 NR_103764 ENSG00000234817 LOC100507506 - uncharacterized LOC100507506 ncRNA chr9-234 chr9 134758995 134759205 + 34.5 0.000 intron (NM_001278074, intron 18 of 65) intron (NM_001278074, intron 18 of 65) 90269 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr10-197 chr10 91672330 91672540 + 34.5 0.000 Intergenic Intergenic -39364 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chr17-413 chr17 4161252 4161462 + 34.5 0.000 Intergenic Intergenic 17660 NM_001254755 124936 Hs.513871 NM_144611 ENSG00000167740 CYB5D2 - cytochrome b5 domain containing 2 protein-coding chr1-333 chr1 156338335 156338545 + 34.5 0.000 promoter-TSS (NR_036564) promoter-TSS (NR_036564) -25 NR_036564 7203 Hs.491494 NM_005998 ENSG00000163468 CCT3 CCT-gamma|CCTG|PIG48|TCP-1-gamma|TRIC5 chaperonin containing TCP1 subunit 3 protein-coding chr19-363 chr19 46860219 46860429 + 34.5 0.000 promoter-TSS (NM_004491) promoter-TSS (NM_004491) -673 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr14-171 chr14 69101456 69101666 + 34.5 0.000 intron (NM_003861, intron 5 of 8) intron (NM_003861, intron 5 of 8) 51038 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr1-287 chr1 155324212 155324422 + 34.5 0.000 promoter-TSS (NR_145425) promoter-TSS (NR_145425) -141 NR_145424 284618 Hs.650801 NM_173639 ENSG00000225855 RUSC1-AS1 C1orf104 RUSC1 antisense RNA 1 ncRNA chr1-181 chr1 26432149 26432359 + 34.5 0.000 promoter-TSS (NM_001243564) promoter-TSS (NM_001243564) -28 NM_001243565 79947 Hs.369385 NM_024887 ENSG00000117682 DHDDS CIT|CPT|DEDSM|DS|HDS|RP59|hCIT dehydrodolichyl diphosphate synthase subunit protein-coding chr16-247 chr16 69917912 69918122 + 34.5 0.000 intron (NM_001270453, intron 7 of 20) intron (NM_001270453, intron 7 of 20) -7022 NM_199424 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr14-160 chr14 75294078 75294288 + 34.5 0.000 promoter-TSS (NR_038421) promoter-TSS (NR_038421) -221 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr13-48 chr13 102596777 102596987 + 34.5 0.000 promoter-TSS (NM_003291) promoter-TSS (NM_003291) -104 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr13-65 chr13 29583423 29583633 + 34.5 0.000 intron (NM_003045, intron 1 of 12) intron (NM_003045, intron 1 of 12) 12160 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr2-528 chr2 48531284 48531494 + 34.5 0.000 intron (NM_001198595, intron 2 of 4) intron (NM_001198595, intron 2 of 4) 1220 NM_001198595 11037 Hs.44385 NM_006873 ENSG00000243244 STON1 SALF|SBLF|STN1|STNB1 stonin 1 protein-coding chr19-397 chr19 57947605 57947815 + 34.5 0.000 promoter-TSS (NM_005773) promoter-TSS (NM_005773) -4 NM_005773 10172 Hs.596242 NM_005773 ENSG00000152454 ZNF256 BMZF-3|BMZF3 zinc finger protein 256 protein-coding chr7-98 chr7 99439182 99439392 + 34.5 0.000 promoter-TSS (NM_015545) promoter-TSS (NM_015545) -89 NM_001318162 10898 Hs.489287 NM_006693 ENSG00000160917 CPSF4 CPSF30|NAR|NEB-1|NEB1 cleavage and polyadenylation specific factor 4 protein-coding chr17-341 chr17 859882 860092 + 34.5 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 4124 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr11-369 chr11 62621969 62622179 + 34.5 0.000 promoter-TSS (NM_001288721) promoter-TSS (NM_001288721) -88 NM_001288723 26229 Hs.502759 NM_012200 ENSG00000149541 B3GAT3 GLCATI|JDSCD|glcUAT-I beta-1,3-glucuronyltransferase 3 protein-coding chr16-327 chr16 72664927 72665137 + 34.5 0.000 promoter-TSS (NR_126330) promoter-TSS (NR_126330) -62 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr11-309 chr11 69420516 69420726 + 34.4 0.000 Intergenic Intergenic -5034 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr1-297 chr1 156591569 156591779 + 34.4 0.000 promoter-TSS (NM_144772) promoter-TSS (NM_144772) -102 NM_144772 128240 Hs.528320 NM_144772 ENSG00000163382 NAXE AIBP|APOA1BP|PEBEL|YJEFN1 NAD(P)HX epimerase protein-coding chr2-266 chr2 23637185 23637395 + 34.4 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 252111 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr1-739 chr1 29974378 29974588 + 34.4 0.000 Intergenic Intergenic 63129 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr12-214 chr12 1634685 1634895 + 34.4 0.000 intron (NM_032642, intron 3 of 4) intron (NM_032642, intron 3 of 4) 5559 NM_032642 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr15-78 chr15 92904243 92904453 + 34.4 0.000 promoter-TSS (NR_036136) promoter-TSS (NR_036136) -51 NR_036136 100422995 NR_036136 ENSG00000284324 MIR3175 mir-3175 microRNA 3175 ncRNA chr5-271 chr5 118326698 118326908 + 34.4 0.000 Intergenic Intergenic 44229 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr11-310 chr11 3124620 3124830 + 34.4 0.000 intron (NM_020896, intron 3 of 21) intron (NM_020896, intron 3 of 21) 40585 NM_020896 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr21-33 chr21 37564549 37564759 + 34.4 0.000 Intergenic Intergenic 144355 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr10-200 chr10 29556182 29556392 + 34.4 0.000 intron (NM_001323599, intron 5 of 38) intron (NM_001323599, intron 5 of 38) -11190 NR_030335 693189 NR_030335 ENSG00000207612 MIR604 MIRN604|hsa-mir-604 microRNA 604 ncRNA chr16-205 chr16 30814406 30814616 + 34.4 0.000 Intergenic CpG -27306 NM_001345970 23361 Hs.301094 NM_001080417 ENSG00000102870 ZNF629 ZNF|ZNF65 zinc finger protein 629 protein-coding chr10-168 chr10 119178645 119178855 + 34.4 0.000 promoter-TSS (NR_126105) promoter-TSS (NR_126105) 62 NR_126106 10935 Hs.523302 NM_006793 ENSG00000165672 PRDX3 AOP-1|AOP1|HBC189|MER5|PRO1748|SP-22|prx-III peroxiredoxin 3 protein-coding chr10-122 chr10 99779880 99780090 + 34.4 0.000 Intergenic L1MCa|LINE|L1 -2655 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr9-292 chr9 85940881 85941091 + 34.4 0.000 promoter-TSS (NM_001321882) promoter-TSS (NM_001321882) -156 NM_001321881 60560 Hs.436098 NM_021929 ENSG00000135040 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding chr12-250 chr12 1374012 1374222 + 34.4 0.000 intron (NR_027948, intron 16 of 19) intron (NR_027948, intron 16 of 19) -126374 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr2-123 chr2 96266090 96266300 + 34.4 0.000 promoter-TSS (NM_004804) promoter-TSS (NM_004804) -30 NM_004804 9391 Hs.12109 NM_004804 ENSG00000144021 CIAO1 CIA1|WDR39 cytosolic iron-sulfur assembly component 1 protein-coding chr12-153 chr12 124786626 124786836 + 34.4 0.000 intron (NR_160424, intron 10 of 11) MLT1J2|LTR|ERVL-MaLR 52940 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr16-519 chr16 71526330 71526540 + 34.4 0.000 promoter-TSS (NM_001166395) promoter-TSS (NM_001166395) 9 NM_001166395 10164 Hs.251383 NM_005769 ENSG00000140835 CHST4 GST3|GlcNAc6ST2|HECGLCNAC6ST|LSST carbohydrate sulfotransferase 4 protein-coding chr11-117 chr11 65919186 65919396 + 34.4 0.000 promoter-TSS (NM_031450) promoter-TSS (NM_031450) -135 NM_006442 10589 Hs.356742 NM_006442 ENSG00000175550 DRAP1 NC2-alpha DR1 associated protein 1 protein-coding chr2-92 chr2 171434077 171434287 + 34.4 0.000 promoter-TSS (NM_001321156) promoter-TSS (NM_001321156) -44 NR_028482 80067 Hs.659439 NM_025000 ENSG00000115827 DCAF17 C20orf37|C2orf37 DDB1 and CUL4 associated factor 17 protein-coding chr12-114 chr12 103965690 103965900 + 34.4 0.000 promoter-TSS (NM_003211) promoter-TSS (NM_003211) -9 NM_001363612 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr3-99 chr3 101676223 101676433 + 34.4 0.000 promoter-TSS (NR_024407) promoter-TSS (NR_024407) -102 NR_024407 100009676 Hs.743292 NR_024407 ENSG00000256628 ZBTB11-AS1 - ZBTB11 antisense RNA 1 ncRNA chr7-372 chr7 134986326 134986536 + 34.4 0.000 promoter-TSS (NM_178563) promoter-TSS (NM_178563) -77 NM_001345853 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr17-277 chr17 18183466 18183676 + 34.4 0.000 promoter-TSS (NM_017758) promoter-TSS (NM_017758) -257 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr17-587 chr17 57948787 57948997 + 34.4 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 6520 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr10-217 chr10 102121479 102121689 + 34.4 0.000 Intergenic Intergenic -1111 NM_001113407 8861 Hs.454418 NM_003893 ENSG00000198728 LDB1 CLIM-2|CLIM2|LDB-1|NLI LIM domain binding 1 protein-coding chr3-245 chr3 11136989 11137199 + 34.4 0.000 promoter-TSS (NM_001098213) promoter-TSS (NM_001098213) -144 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr7-80 chr7 1504300 1504510 + 34.4 0.000 promoter-TSS (NM_001080453) promoter-TSS (NM_001080453) -16 NM_001080453 26173 Hs.532188 NM_001080453 ENSG00000164880 INTS1 INT1|NET28 integrator complex subunit 1 protein-coding chr17-380 chr17 17877661 17877871 + 34.4 0.000 intron (NM_001288787, intron 6 of 13) intron (NM_001288787, intron 6 of 13) -40755 NM_004176 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr21-24 chr21 36320049 36320259 + 34.4 0.000 promoter-TSS (NM_001320446) promoter-TSS (NM_001320446) -35 NM_001320446 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr13-46 chr13 49792742 49792952 + 34.4 0.000 promoter-TSS (NM_002267) promoter-TSS (NM_002267) -165 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr19-346 chr19 16572437 16572647 + 34.4 0.000 promoter-TSS (NM_024881) promoter-TSS (NM_024881) -127 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr16-307 chr16 66830774 66830984 + 34.3 0.000 promoter-TSS (NM_001018160) promoter-TSS (NM_001018160) 97 NM_001018159 8883 Hs.460978 NM_003905 ENSG00000159593 NAE1 A-116A10.1|APPBP1|HPP1|ula-1 NEDD8 activating enzyme E1 subunit 1 protein-coding chr2-374 chr2 130181614 130181824 + 34.3 0.000 promoter-TSS (NM_001330282) promoter-TSS (NM_001330282) 38 NM_017751 55627 Hs.516450 NM_017751 ENSG00000136699 SMPD4 NET13|NSMASE-3|NSMASE3|SKNY sphingomyelin phosphodiesterase 4 protein-coding chrX-63 chrX 71365981 71366191 + 34.3 0.000 promoter-TSS (NM_138923) promoter-TSS (NM_138923) -153 NM_138923 6872 Hs.158560 NM_004606 ENSG00000147133 TAF1 BA2R|CCG1|CCGS|DYT3|DYT3/TAF1|KAT4|MRXS33|N-TAF1|NSCL2|OF|P250|TAF(II)250|TAF2A|TAFII-250|TAFII250|XDP TATA-box binding protein associated factor 1 protein-coding chr15-115 chr15 39771343 39771553 + 34.3 0.000 intron (NM_152597, intron 2 of 11) intron (NM_152597, intron 2 of 11) 11393 NM_152597 161835 Hs.129598 NM_152597 ENSG00000150667 FSIP1 HSD10 fibrous sheath interacting protein 1 protein-coding chr17-208 chr17 73291567 73291777 + 34.3 0.000 intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) 20329 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr3-190 chr3 128680638 128680848 + 34.3 0.000 Intergenic CpG -29925 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chr5-329 chr5 65769562 65769772 + 34.3 0.000 intron (NM_020726, intron 3 of 12) MIRb|SINE|MIR 47462 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chr10-126 chr10 102646101 102646311 + 34.3 0.000 intron (NM_001345950, intron 1 of 4) intron (NM_001345950, intron 1 of 4) 1711 NR_144321 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr10-428 chr10 297345 297555 + 34.3 0.000 intron (NM_014974, intron 32 of 36) L1MA5A|LINE|L1 117456 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr14-115 chr14 37197825 37198035 + 34.3 0.000 promoter-TSS (NM_001195296) promoter-TSS (NM_001195296) -7 NM_001195296 145282 Hs.660396 NM_138731 ENSG00000151338 MIPOL1 CCDC193 mirror-image polydactyly 1 protein-coding chr1-199 chr1 205813059 205813269 + 34.3 0.000 promoter-TSS (NM_173854) promoter-TSS (NM_173854) 34 NM_173854 254428 Hs.20274 NM_173854 ENSG00000133065 SLC41A1 MgtE solute carrier family 41 member 1 protein-coding chr19-280 chr19 1848460 1848670 + 34.3 0.000 promoter-TSS (NM_020695) promoter-TSS (NM_020695) -82 NM_020695 57455 Hs.192477 NM_020695 ENSG00000079313 REXO1 ELOABP1|EloA-BP1|REX1|TCEB3BP1 RNA exonuclease 1 homolog protein-coding chr1-325 chr1 50960274 50960484 + 34.3 0.000 promoter-TSS (NM_007051) promoter-TSS (NM_007051) -112 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chrX-30 chrX 149539504 149539714 + 34.3 0.000 promoter-TSS (NM_001324274) promoter-TSS (NM_001324274) 143 NR_027455 100131434 Hs.669775 NM_001039766 ENSG00000241769 LINC00893 - long intergenic non-protein coding RNA 893 ncRNA chr4-144 chr4 143336066 143336276 + 34.3 0.000 promoter-TSS (NM_002039) promoter-TSS (NM_002039) -705 NM_002039 2549 Hs.80720 NM_002039 ENSG00000109458 GAB1 DFNB26 GRB2 associated binding protein 1 protein-coding chr1-422 chr1 154463182 154463392 + 34.3 0.000 intron (NM_000565, intron 9 of 9) intron (NM_000565, intron 9 of 9) -38932 NM_182499 126668 Hs.387671 NM_182499 ENSG00000163239 TDRD10 - tudor domain containing 10 protein-coding chr8-81 chr8 144786736 144786946 + 34.3 0.000 intron (NM_001286769, intron 1 of 5) CpG 504 NM_001286770 80778 Hs.631854 NM_030580 ENSG00000196378 ZNF34 KOX32 zinc finger protein 34 protein-coding chr13-134 chr13 80048827 80049037 + 34.3 0.000 Intergenic Intergenic 37855 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr6-44 chr6 157981542 157981752 + 34.3 0.000 promoter-TSS (NM_003898) promoter-TSS (NM_003898) -216 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr1-471 chr1 236282006 236282216 + 34.3 0.000 promoter-TSS (NM_019891) promoter-TSS (NM_019891) -153 NM_019891 56605 Hs.558519 NM_019891 ENSG00000086619 ERO1B ERO1LB|Ero1beta endoplasmic reticulum oxidoreductase 1 beta protein-coding chr4-190 chr4 8035487 8035697 + 34.3 0.000 intron (NM_001286688, intron 5 of 14) intron (NM_001286688, intron 5 of 14) -30211 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr1-173 chr1 201469234 201469444 + 34.3 0.000 promoter-TSS (NR_073080) promoter-TSS (NR_073080) -151 NM_012396 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr12-93 chr12 4031261 4031471 + 34.3 0.000 Intergenic (GCGCT)n|Simple_repeat|Simple_repeat -157918 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr6-76 chr6 75284775 75284985 + 34.3 0.000 promoter-TSS (NM_018247) promoter-TSS (NM_018247) -88 NM_018247 55754 Hs.108530 NM_018247 ENSG00000112697 TMEM30A C6orf67|CDC50A transmembrane protein 30A protein-coding chr20-123 chr20 19735519 19735729 + 34.3 0.000 Intergenic Intergenic -150897 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr3-244 chr3 196528683 196528893 + 34.3 0.000 Intergenic CpG -13442 NM_001320473 255798 Hs.631933 NM_001077657 ENSG00000214097 SMCO1 C3orf43 single-pass membrane protein with coiled-coil domains 1 protein-coding chr3-472 chr3 127768520 127768730 + 34.3 0.000 intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 54257 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr8-32 chr8 143840918 143841128 + 34.3 0.000 promoter-TSS (NM_178564) promoter-TSS (NM_178564) -50 NM_178564 340371 Hs.521926 NM_178564 ENSG00000185189 NRBP2 TRG16|pp9320 nuclear receptor binding protein 2 protein-coding chr7-294 chr7 82805581 82805791 + 34.3 0.000 intron (NM_033026, intron 21 of 24) intron (NM_033026, intron 21 of 24) 357198 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr22-134 chr22 40370579 40370789 + 34.3 0.000 promoter-TSS (NM_015705) promoter-TSS (NM_015705) 90 NM_001350047 27352 Hs.474914 NM_015705 ENSG00000100359 SGSM3 CIP85|MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5|rabGAPLP small G protein signaling modulator 3 protein-coding chr1-466 chr1 150282232 150282442 + 34.3 0.000 promoter-TSS (NM_144697) promoter-TSS (NM_144697) -217 NM_001300839 148523 Hs.54680 NM_144697 ENSG00000159208 CIART C1orf51|CHRONO|GM129 circadian associated repressor of transcription protein-coding chr7-427 chr7 105225277 105225487 + 34.3 0.000 intron (NM_182692, intron 2 of 15) Helitron3Na_Mam|RC|Helitron 43695 NM_001350739 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr10-302 chr10 125896473 125896683 + 34.3 0.000 promoter-TSS (NM_145235) promoter-TSS (NM_145235) 43 NM_145235 92565 Hs.352591 NM_145235 ENSG00000203780 FANK1 HSD13 fibronectin type III and ankyrin repeat domains 1 protein-coding chr22-159 chr22 19942724 19942934 + 34.3 0.000 intron (NM_001362828, intron 1 of 5) MER67A|LTR|ERV1 -1011 NM_006440 10587 Hs.443430 NM_006440 ENSG00000184470 TXNRD2 GCCD5|SELZ|TR|TR-BETA|TR3|TRXR2 thioredoxin reductase 2 protein-coding chr19-726 chr19 19900696 19900906 + 34.3 0.000 promoter-TSS (NM_031218) promoter-TSS (NM_031218) -145 NM_031218 81931 Hs.301059 NM_031218 ENSG00000184635 ZNF93 HPF34|HTF34|TF34|ZNF505 zinc finger protein 93 protein-coding chr15-69 chr15 64387727 64387937 + 34.3 0.000 promoter-TSS (NM_016213) promoter-TSS (NM_016213) -4 NR_135855 9325 Hs.500340 NM_016213 ENSG00000103671 TRIP4 ASC-1|ASC1|HsT17391|MDCDC|SMABF1|ZC2HC5 thyroid hormone receptor interactor 4 protein-coding chr17-375 chr17 44587386 44587596 + 34.3 0.000 Intergenic Intergenic 30007 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr22-202 chr22 27512409 27512619 + 34.3 0.000 Intergenic Intergenic 201863 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chrX-9 chrX 2928732 2928942 + 34.3 0.000 intron (NM_009589, intron 1 of 6) CpG 502 NM_009589 414 Hs.528631 NM_001669 ENSG00000006756 ARSD ASD arylsulfatase D protein-coding chr15-127 chr15 48559357 48559567 + 34.3 0.000 intron (NM_000138, intron 6 of 65) intron (NM_000138, intron 6 of 65) 86326 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr21-23 chr21 33542094 33542304 + 34.3 0.000 promoter-TSS (NM_032195) promoter-TSS (NM_032195) -82 NM_000819 2618 Hs.473648 NM_000819 ENSG00000159131 GART AIRS|GARS|GARTF|PAIS|PGFT|PRGS phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase protein-coding chr11-313 chr11 61718591 61718801 + 34.2 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) -33940 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr1-650 chr1 28437996 28438206 + 34.2 0.000 promoter-TSS (NM_023923) promoter-TSS (NM_023923) -49 NM_023923 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr1-294 chr1 109100037 109100247 + 34.2 0.000 promoter-TSS (NR_003023) promoter-TSS (NR_003023) -51 NR_003023 677766 Hs.550815 NR_003023 ENSG00000278249 SCARNA2 HBII-382|mgU2-25/61 small Cajal body-specific RNA 2 ncRNA chr5-202 chr5 147391932 147392142 + 34.2 0.000 3' UTR (NM_001387, exon 14 of 14) 3' UTR (NM_001387, exon 14 of 14) 61655 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr15-183 chr15 96047404 96047614 + 34.2 0.000 Intergenic Intergenic 80332 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr20-24 chr20 5126657 5126867 + 34.2 0.000 promoter-TSS (NM_002592) promoter-TSS (NM_002592) -140 NM_002592 5111 Hs.147433 NM_002592 ENSG00000132646 PCNA ATLD2 proliferating cell nuclear antigen protein-coding chr14-82 chr14 73644783 73644993 + 34.2 0.000 promoter-TSS (NM_031427) promoter-TSS (NM_031427) -98 NM_001201366 83544 Hs.271270 NM_031427 ENSG00000119661 DNAL1 C14orf168|CILD16|LC1 dynein axonemal light chain 1 protein-coding chr16-171 chr16 2033602 2033812 + 34.2 0.000 intron (NM_001252073, intron 1 of 5) intron (NM_001252073, intron 1 of 5) 413 NM_001252076 9351 Hs.440896 NM_004785 ENSG00000065054 SLC9A3R2 E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1 SLC9A3 regulator 2 protein-coding chr6-181 chr6 43517060 43517270 + 34.2 0.000 promoter-TSS (NM_015388) promoter-TSS (NM_015388) 76 NM_001363658 9533 Hs.743509 NM_004875 ENSG00000171453 POLR1C AC40|HLD11|RPA39|RPA40|RPA5|RPAC1|RPC40|TCS3 RNA polymerase I and III subunit C protein-coding chr11-705 chr11 71286916 71287126 + 34.2 0.000 Intergenic Intergenic -62225 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr1-613 chr1 35193156 35193366 + 34.2 0.000 promoter-TSS (NR_136702) promoter-TSS (NR_136702) -116 NM_005066 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr10-388 chr10 35260117 35260327 + 34.2 0.000 intron (NM_181698, intron 3 of 11) intron (NM_181698, intron 3 of 11) 13197 NM_181698 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr19-382 chr19 12933672 12933882 + 34.2 0.000 promoter-TSS (NM_004461) promoter-TSS (NM_004461) -66 NM_004461 2193 Hs.23111 NM_004461 ENSG00000179115 FARSA CML33|FARSL|FARSLA|FRSA|PheHA phenylalanyl-tRNA synthetase subunit alpha protein-coding chr6-230 chr6 7389605 7389815 + 34.2 0.000 promoter-TSS (NM_031480) promoter-TSS (NM_031480) 32 NM_001170692 285782 Hs.721486 NM_175745 ENSG00000164304 CAGE1 CT3|CT95|CTAG3|bA69L16.7 cancer antigen 1 protein-coding chr11-345 chr11 10454991 10455201 + 34.2 0.000 promoter-TSS (NM_001025390) promoter-TSS (NM_001025390) -168 NM_001025389 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr20-175 chr20 8161877 8162087 + 34.2 0.000 intron (NM_182734, intron 2 of 32) intron (NM_182734, intron 2 of 32) 29716 NM_182734 23236 Hs.431173 NM_015192 ENSG00000182621 PLCB1 EIEE12|PI-PLC|PLC-154|PLC-I|PLC-beta-1|PLC154|PLCB1A|PLCB1B phospholipase C beta 1 protein-coding chr19-366 chr19 2275178 2275388 + 34.2 0.000 3' UTR (NM_198532, exon 4 of 4) 3' UTR (NM_198532, exon 4 of 4) 5797 NM_001301020 4946 Hs.446427 NM_004152 ENSG00000104904 OAZ1 AZ1|AZI|OAZ ornithine decarboxylase antizyme 1 protein-coding chr11-772 chr11 35491542 35491752 + 34.2 0.000 intron (NM_015430, intron 3 of 11) intron (NM_015430, intron 3 of 11) 33969 NM_015430 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr1-389 chr1 206001554 206001764 + 34.2 0.000 intron (NM_001164522, intron 1 of 5) intron (NM_001164522, intron 1 of 5) 1736 NM_001164522 338382 Hs.534612 NM_177403 ENSG00000276600 RAB7B RAB7 RAB7B, member RAS oncogene family protein-coding chr7-364 chr7 30469458 30469668 + 34.2 0.000 intron (NM_006092, intron 1 of 13) intron (NM_006092, intron 1 of 13) 9221 NM_006092 10392 Hs.405153 NM_006092 ENSG00000106100 NOD1 CARD4|CLR7.1|NLRC1 nucleotide binding oligomerization domain containing 1 protein-coding chr7-401 chr7 44573788 44573998 + 34.2 0.000 exon (NM_001257189, exon 1 of 13) exon (NM_001257189, exon 1 of 13) 645 NM_001257189 54606 Hs.654762 NM_019082 ENSG00000136271 DDX56 DDX21|DDX26|NOH61 DEAD-box helicase 56 protein-coding chr3-454 chr3 33300062 33300272 + 34.2 0.000 intron (NM_001349322, intron 3 of 12) intron (NM_001349322, intron 3 of 12) 22725 NR_146123 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding chr12-126 chr12 68365290 68365500 + 34.2 0.000 Intergenic Intergenic -32981 NM_001354972 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr5-219 chr5 157385064 157385274 + 34.2 0.000 intron (NM_001037333, intron 28 of 30) intron (NM_001037333, intron 28 of 30) -39492 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr5-250 chr5 150781792 150782002 + 34.2 0.000 intron (NM_032947, intron 1 of 1) intron (NM_032947, intron 1 of 1) 3951 NM_032947 85027 Hs.29444 NM_032947 ENSG00000256235 SMIM3 C5orf62|MST150|NID67 small integral membrane protein 3 protein-coding chr12-221 chr12 113700969 113701179 + 34.2 0.000 Intergenic MIR|SINE|MIR 72609 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr1-393 chr1 9315852 9316062 + 34.2 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 23063 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr6-28 chr6 116680989 116681199 + 34.2 0.000 promoter-TSS (NM_001366309) promoter-TSS (NM_001366309) -117 NM_001366310 3841 Hs.182971 NM_002269 ENSG00000196911 KPNA5 IPOA6|SRP6 karyopherin subunit alpha 5 protein-coding chr9-294 chr9 124306375 124306585 + 34.2 0.000 intron (NM_001166169, intron 2 of 9) intron (NM_001166169, intron 2 of 9) 14060 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr17-294 chr17 5419600 5419810 + 34.2 0.000 promoter-TSS (NM_001320653) promoter-TSS (NM_001320653) 34 NM_001320653 4927 Hs.584784 NM_002532 ENSG00000108559 NUP88 FADS4 nucleoporin 88 protein-coding chr17-254 chr17 83161680 83161890 + 34.2 0.000 Intergenic Intergenic -65112 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr6-154 chr6 73774503 73774713 + 34.2 0.000 intron (NM_001159588, intron 14 of 31) L1MEh|LINE|L1 78405 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr7-119 chr7 149261888 149262098 + 34.2 0.000 promoter-TSS (NR_144366) promoter-TSS (NR_144366) -203 NR_144366 100289678 Hs.490512 NM_001195220 ENSG00000204946 ZNF783 - zinc finger family member 783 protein-coding chr19-331 chr19 47729562 47729772 + 34.2 0.000 intron (NM_014601, intron 4 of 5) intron (NM_014601, intron 4 of 5) -15879 NM_015710 29997 Hs.421907 NM_015710 ENSG00000105373 NOP53 GLTSCR2|PICT-1|PICT1 NOP53 ribosome biogenesis factor protein-coding chrX-45 chrX 49101183 49101393 + 34.2 0.000 promoter-TSS (NM_007075) promoter-TSS (NM_007075) -167 NM_007075 11152 Hs.632807 NM_007075 ENSG00000196998 WDR45 JM5|NBIA4|NBIA5|WDRX1|WIPI-4|WIPI4 WD repeat domain 45 protein-coding chr17-431 chr17 43418953 43419163 + 34.2 0.000 Intergenic Intergenic 20065 NM_001661 379 Hs.183153 NM_001661 ENSG00000175906 ARL4D ARF4L|ARL6 ADP ribosylation factor like GTPase 4D protein-coding chr10-262 chr10 77478432 77478642 + 34.2 0.000 intron (NM_001271519, intron 1 of 28) MIR3|SINE|MIR 127665 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr20-88 chr20 1470160 1470370 + 34.1 0.000 Intergenic Intergenic -2573 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding chr5-80 chr5 177607511 177607721 + 34.1 0.000 intron (NM_007255, intron 3 of 5) intron (NM_007255, intron 3 of 5) 7484 NM_007255 11285 Hs.455109 NM_007255 ENSG00000027847 B4GALT7 EDSP1|EDSSLA|EDSSPD1|XGALT1|XGPT|XGPT1 beta-1,4-galactosyltransferase 7 protein-coding chr3-384 chr3 188594275 188594485 + 34.1 0.000 intron (NM_001167672, intron 4 of 9) MIR1_Amn|SINE|MIR -25714 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr1-698 chr1 151608386 151608596 + 34.1 0.000 Intergenic L2c|LINE|L2 -3559 NM_001330723 81609 Hs.192326 NM_030918 ENSG00000143376 SNX27 MRT1|MY014 sorting nexin 27 protein-coding chr15-94 chr15 86863447 86863657 + 34.1 0.000 intron (NM_152336, intron 23 of 24) intron (NM_152336, intron 23 of 24) -69328 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr2-78 chr2 174487131 174487341 + 34.1 0.000 promoter-TSS (NM_152529) promoter-TSS (NM_152529) -148 NM_001267051 151556 Hs.516604 NM_152529 ENSG00000163328 GPR155 DEP.7|DEPDC3|PGR22 G protein-coupled receptor 155 protein-coding chr9-336 chr9 113579001 113579211 + 34.1 0.000 intron (NM_001351526, intron 2 of 8) intron (NM_001351526, intron 2 of 8) -1822 NM_001282922 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr10-329 chr10 125028557 125028767 + 34.1 0.000 promoter-TSS (NM_022802) promoter-TSS (NM_022802) -591 NM_022802 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr16-414 chr16 89422849 89423059 + 34.1 0.000 intron (NR_045839, intron 1 of 9) intron (NR_045839, intron 1 of 9) -7964 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr2-172 chr2 239309116 239309326 + 34.1 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) 3759 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr15-151 chr15 75625823 75626033 + 34.1 0.000 promoter-TSS (NM_005701) promoter-TSS (NM_005701) 177 NM_001042581 10073 Hs.21577 NM_005701 ENSG00000169371 SNUPN KPNBL|RNUT1|Snurportin1 snurportin 1 protein-coding chr4-248 chr4 185344153 185344363 + 34.1 0.000 intron (NM_001317781, intron 12 of 18) LTR38C|LTR|ERV1 34740 NM_018409 55805 Hs.558513 NM_018409 ENSG00000109771 LRP2BP - LRP2 binding protein protein-coding chr8-128 chr8 144853125 144853335 + 34.1 0.000 promoter-TSS (NM_014066) promoter-TSS (NM_014066) -163 NM_001287237 28991 Hs.493218 NM_014066 ENSG00000170619 COMMD5 HCARG|HT002 COMM domain containing 5 protein-coding chr3-221 chr3 9843873 9844083 + 34.1 0.000 promoter-TSS (NM_001351736) promoter-TSS (NM_001351736) 30 NM_001351736 285367 Hs.33719 NM_173659 ENSG00000156990 RPUSD3 - RNA pseudouridine synthase D3 protein-coding chr6-214 chr6 109691015 109691225 + 34.1 0.000 promoter-TSS (NM_001145128) promoter-TSS (NM_001145128) 92 NM_001329603 221264 Hs.205144 NM_145025 ENSG00000155085 AK9 AK 9|AKD1|AKD2|C6orf199|C6orf224|dJ70A9.1 adenylate kinase 9 protein-coding chr17-222 chr17 3668045 3668255 + 34.1 0.000 promoter-TSS (NM_001014764) promoter-TSS (NM_001014764) 428 NM_014604 30851 Hs.12956 NM_014604 ENSG00000213977 TAX1BP3 TIP-1|TIP1 Tax1 binding protein 3 protein-coding chr11-130 chr11 65524717 65524927 + 34.1 0.000 promoter-TSS (NM_001048218) promoter-TSS (NM_001048218) -261 NM_020680 57410 Hs.238839 NM_020680 ENSG00000142186 SCYL1 GKLP|HT019|NKTL|NTKL|P105|SCAR21|TAPK|TEIF|TRAP SCY1 like pseudokinase 1 protein-coding chr10-133 chr10 42638300 42638510 + 34.1 0.000 intron (NM_001305040, intron 1 of 6) CpG 165 NR_130951 7582 Hs.435774 NM_006955 ENSG00000196693 ZNF33B KOX2|KOX31|ZNF11B zinc finger protein 33B protein-coding chr4-221 chr4 54281459 54281669 + 34.1 0.000 intron (NM_001347829, intron 16 of 22) intron (NM_001347829, intron 16 of 22) 47604 NM_001347830 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chr8-310 chr8 106398336 106398546 + 34.1 0.000 intron (NM_018002, intron 2 of 15) intron (NM_018002, intron 2 of 15) -49483 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr18-33 chr18 62522887 62523097 + 34.1 0.000 promoter-TSS (NM_017742) promoter-TSS (NM_017742) -33 NM_017742 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr15-53 chr15 62060468 62060678 + 34.1 0.000 promoter-TSS (NM_017684) promoter-TSS (NM_017684) 70 NR_135690 101928907 Hs.552949 NR_135690 LOC101928907 - uncharacterized LOC101928907 ncRNA chr1-118 chr1 38859759 38859969 + 34.1 0.000 promoter-TSS (NM_001271851) promoter-TSS (NM_001271851) -92 NM_022157 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr6-43 chr6 104859719 104859929 + 34.1 0.000 promoter-TSS (NM_001350559) promoter-TSS (NM_001350559) 95 NM_001350555 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr9-278 chr9 134475437 134475647 + 34.1 0.000 Intergenic Intergenic 68982 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr2-289 chr2 235005868 235006078 + 34.1 0.000 intron (NM_001371304, intron 2 of 5) intron (NM_001371304, intron 2 of 5) -21762 NM_001371306 chr1-809 chr1 24878891 24879101 + 34.1 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 40420 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr11-353 chr11 77819407 77819617 + 34.1 0.000 intron (NM_016578, intron 1 of 15) intron (NM_016578, intron 1 of 15) 1322 NM_016578 51773 Hs.420229 NM_016578 ENSG00000048649 RSF1 HBXAP|RSF-1|XAP8|p325 remodeling and spacing factor 1 protein-coding chr1-169 chr1 16913855 16914065 + 34.1 0.000 Intergenic CpG -7971 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr22-142 chr22 21837287 21837497 + 34.1 0.000 intron (NM_002745, intron 1 of 8) intron (NM_002745, intron 1 of 8) 30288 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr1-268 chr1 204296547 204296757 + 34.1 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 63277 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr15-65 chr15 64460340 64460550 + 34.1 0.000 Intergenic CpG -38975 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr7-190 chr7 27739848 27740058 + 33.9 0.000 promoter-TSS (NM_001362795) promoter-TSS (NM_001362795) -142 NM_001206902 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr7-468 chr7 74272713 74272923 + 33.9 0.000 Intergenic Intergenic -16589 NM_032421 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr16-269 chr16 74695996 74696206 + 33.9 0.000 intron (NM_001142497, intron 1 of 5) MLT1J2|LTR|ERVL-MaLR 4761 NM_152649 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr9-201 chr9 126517190 126517400 + 33.9 0.000 Intergenic Intergenic -97148 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr7-135 chr7 112206432 112206642 + 33.9 0.000 promoter-TSS (NM_021994) promoter-TSS (NM_021994) -138 NM_001363540 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr15-123 chr15 64461451 64461661 + 33.9 0.000 Intergenic Intergenic -37864 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr7-267 chr7 105352141 105352351 + 33.9 0.000 intron (NM_001350746, intron 2 of 14) MLT1F1|LTR|ERVL-MaLR 36675 NM_182692 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr15-198 chr15 45279196 45279406 + 33.9 0.000 promoter-TSS (NR_120335) promoter-TSS (NR_120335) -79 NR_120335 101928414 NR_120335 ENSG00000259520 LOC101928414 - uncharacterized LOC101928414 ncRNA chr21-41 chr21 21165369 21165579 + 33.9 0.000 intron (NM_001352597, intron 1 of 10) MER77|LTR|ERVL 18312 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr13-56 chr13 51453076 51453286 + 33.9 0.000 promoter-TSS (NR_103812) promoter-TSS (NR_103812) -145 NM_012141 26512 Hs.439440 NM_012141 ENSG00000102786 INTS6 DBI-1|DDX26|DDX26A|DICE1|HDB|INT6|Notchl2 integrator complex subunit 6 protein-coding chr19-567 chr19 18464695 18464905 + 33.9 0.000 intron (NM_006532, intron 4 of 11) intron (NM_006532, intron 4 of 11) -26667 NM_001170938 51477 Hs.405873 NM_016368 ENSG00000105655 ISYNA1 INO1|INOS|IPS|IPS 1|IPS-1 inositol-3-phosphate synthase 1 protein-coding chr9-413 chr9 133897641 133897851 + 33.9 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 94578 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr8-160 chr8 38912651 38912861 + 33.9 0.000 intron (NM_021623, intron 1 of 11) intron (NM_021623, intron 1 of 11) 11410 NM_021623 59339 Hs.369123 NM_021623 ENSG00000169499 PLEKHA2 TAPP2 pleckstrin homology domain containing A2 protein-coding chr11-377 chr11 34192963 34193173 + 33.9 0.000 intron (NM_145804, intron 3 of 16) intron (NM_145804, intron 3 of 16) 87439 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr8-322 chr8 70557160 70557370 + 33.9 0.000 Intergenic Intergenic 50404 NM_001317805 23471 Hs.491988 NM_014294 ENSG00000067167 TRAM1 PNAS8|TRAM|TRAMP translocation associated membrane protein 1 protein-coding chr17-465 chr17 933466 933676 + 33.9 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 23939 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr8-66 chr8 143334637 143334847 + 33.9 0.000 exon (NM_052963, exon 1 of 14) exon (NM_052963, exon 1 of 14) 138 NM_052963 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr6-38 chr6 43174436 43174646 + 33.9 0.000 intron (NM_001292001, intron 2 of 6) intron (NM_001292001, intron 2 of 6) 2145 NM_001292001 6722 Hs.520140 NM_003131 ENSG00000112658 SRF MCM1 serum response factor protein-coding chr9-176 chr9 136887179 136887389 + 33.9 0.000 TTS (NR_039697) TTS (NR_039697) 551 NR_039697 100616480 NR_039697 ENSG00000266507 MIR4479 - microRNA 4479 ncRNA chr1-799 chr1 209587849 209588059 + 33.9 0.000 intron (NM_020439, intron 1 of 12) intron (NM_020439, intron 1 of 12) 4240 NM_020439 57172 Hs.199068 NM_020439 ENSG00000008118 CAMK1G CLICK3|CLICKIII|VWS1|dJ272L16.1 calcium/calmodulin dependent protein kinase IG protein-coding chr9-530 chr9 37412687 37412897 + 33.9 0.000 Intergenic Intergenic -9904 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr19-204 chr19 53879317 53879527 + 33.9 0.000 Intergenic CpG -2775 NM_001316329 5582 Hs.631564 NM_002739 ENSG00000126583 PRKCG PKC-gamma|PKCC|PKCG|PKCI(3)|PKCgamma|SCA14 protein kinase C gamma protein-coding chr22-154 chr22 21937879 21938089 + 33.9 0.000 promoter-TSS (NR_147620) promoter-TSS (NR_147620) -253 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr22-62 chr22 37538837 37539047 + 33.9 0.000 Intergenic Intergenic -19527 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr3-163 chr3 47513378 47513588 + 33.9 0.000 promoter-TSS (NM_001363957) promoter-TSS (NM_001363957) -138 NM_001363957 54859 Hs.311100 NM_017713 ENSG00000163832 ELP6 C3orf75|TMEM103 elongator acetyltransferase complex subunit 6 protein-coding chr16-225 chr16 24539385 24539595 + 33.9 0.000 promoter-TSS (NM_032626) promoter-TSS (NM_032626) -76 NM_006910 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding chr22-226 chr22 45689038 45689248 + 33.9 0.000 intron (NM_001167621, intron 1 of 10) intron (NM_001167621, intron 1 of 10) 17309 NM_013236 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr5-265 chr5 138706997 138707207 + 33.9 0.000 Intergenic Intergenic 46207 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr14-189 chr14 49586498 49586708 + 33.9 0.000 promoter-TSS (NM_001030001) promoter-TSS (NM_001030001) 23 NR_002715 6029 NR_002715 ENSG00000276168 RN7SL1 7L1a|7SL|RN7SL|RNSRP1 RNA component of signal recognition particle 7SL1 scRNA chr8-599 chr8 118439760 118439970 + 33.9 0.000 exon (NM_001363274, exon 3 of 5) exon (NM_001363274, exon 3 of 5) -181136 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr7-259 chr7 2638550 2638760 + 33.9 0.000 intron (NM_025250, intron 1 of 13) intron (NM_025250, intron 1 of 13) 6669 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr2-230 chr2 159228197 159228407 + 33.9 0.000 intron (NM_001350065, intron 26 of 27) intron (NM_001350065, intron 26 of 27) 41467 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr10-247 chr10 11552165 11552375 + 33.9 0.000 intron (NM_014688, intron 2 of 14) intron (NM_014688, intron 2 of 14) -19990 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr10-222 chr10 110496174 110496384 + 33.9 0.000 Intergenic L2b|LINE|L2 -1628 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr22-192 chr22 41746650 41746860 + 33.9 0.000 intron (NM_152513, intron 14 of 30) intron (NM_152513, intron 14 of 30) 47252 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr16-279 chr16 67723328 67723538 + 33.9 0.000 3' UTR (NM_001320239, exon 13 of 13) 3' UTR (NM_001320239, exon 13 of 13) -4117 NM_001243650 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr17-314 chr17 83144444 83144654 + 33.9 0.000 Intergenic Intergenic 63403 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr1-598 chr1 40015262 40015472 + 33.9 0.000 Intergenic Intergenic -24698 NM_001350480 10487 Hs.370581 NM_006367 ENSG00000131236 CAP1 CAP|CAP1-PEN cyclase associated actin cytoskeleton regulatory protein 1 protein-coding chr1-266 chr1 150507961 150508171 + 33.9 0.000 promoter-TSS (NM_004425) promoter-TSS (NM_004425) -43 NM_001202858 1893 Hs.81071 NM_004425 ENSG00000143369 ECM1 URBWD extracellular matrix protein 1 protein-coding chr9-281 chr9 128091257 128091467 + 33.9 0.000 promoter-TSS (NM_001265614) promoter-TSS (NM_001265614) -102 NM_001006642 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr17-336 chr17 39699818 39700028 + 33.9 0.000 promoter-TSS (NM_001289937) promoter-TSS (NM_001289937) -55 NR_110535 2064 Hs.446352 NM_004448 ENSG00000141736 ERBB2 CD340|HER-2|HER-2/neu|HER2|MLN 19|NEU|NGL|TKR1 erb-b2 receptor tyrosine kinase 2 protein-coding chr1-289 chr1 1324470 1324680 + 33.9 0.000 promoter-TSS (NM_001029885) promoter-TSS (NM_001029885) 85 NM_017871 54973 Hs.6449 NM_017871 ENSG00000127054 INTS11 CPSF3L|CPSF73L|INT11|RC-68|RC68 integrator complex subunit 11 protein-coding chrX-16 chrX 120250634 120250844 + 33.9 0.000 promoter-TSS (NM_001184742) promoter-TSS (NM_001184742) -73 NM_001184742 10009 Hs.143604 NM_006777 ENSG00000177485 ZBTB33 ZNF-kaiso|ZNF348 zinc finger and BTB domain containing 33 protein-coding chr11-537 chr11 97966176 97966386 + 33.9 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -1054668 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr1-348 chr1 231691636 231691846 + 33.8 0.000 intron (NM_001164556, intron 1 of 4) intron (NM_001164556, intron 1 of 4) 64926 NM_001164548 27185 Hs.13318 NM_018662 ENSG00000162946 DISC1 C1orf136|SCZD9 DISC1 scaffold protein protein-coding chr2-368 chr2 220847634 220847844 + 33.8 0.000 Intergenic Intergenic 724565 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-596 chr3 129399476 129399686 + 33.8 0.000 promoter-TSS (NR_003111) promoter-TSS (NR_003111) -142 NR_003111 132241 Hs.477537 NR_003111 ENSG00000251474 RPL32P3 - ribosomal protein L32 pseudogene 3 pseudo chr7-256 chr7 127651861 127652071 + 33.8 0.000 promoter-TSS (NM_014390) promoter-TSS (NM_014390) -228 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr7-310 chr7 2757793 2758003 + 33.8 0.000 intron (NM_007353, intron 2 of 3) intron (NM_007353, intron 2 of 3) 5242 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr16-208 chr16 1533670 1533880 + 33.8 0.000 5' UTR (NM_024600, exon 1 of 3) 5' UTR (NM_024600, exon 1 of 3) 109 NM_024600 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr15-175 chr15 67178656 67178866 + 33.8 0.000 intron (NM_001145103, intron 5 of 8) intron (NM_001145103, intron 5 of 8) 12606 NM_001145104 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr11-423 chr11 926633 926843 + 33.8 0.000 intron (NR_144509, intron 1 of 20) intron (NR_144509, intron 1 of 20) 868 NM_012305 161 Hs.19121 NM_012305 ENSG00000183020 AP2A2 ADTAB|CLAPA2|HIP-9|HIP9|HYPJ adaptor related protein complex 2 subunit alpha 2 protein-coding chr5-200 chr5 172179529 172179739 + 33.8 0.000 intron (NM_005990, intron 1 of 18) intron (NM_005990, intron 1 of 18) 8590 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr11-499 chr11 85719112 85719322 + 33.8 0.000 promoter-TSS (NM_001365834) promoter-TSS (NM_001365834) -37 NM_206929 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr12-403 chr12 53623619 53623829 + 33.8 0.000 intron (NR_073163, intron 1 of 12) intron (NR_073163, intron 1 of 12) 2266 NM_001366556 11016 Hs.12286 NM_006856 ENSG00000170653 ATF7 ATFA activating transcription factor 7 protein-coding chr1-506 chr1 44986440 44986650 + 33.8 0.000 promoter-TSS (NM_020365) promoter-TSS (NM_020365) 50 NM_020365 8891 Hs.533549 NM_020365 ENSG00000070785 EIF2B3 EIF-2B|EIF2Bgamma eukaryotic translation initiation factor 2B subunit gamma protein-coding chrX-52 chrX 153794396 153794606 + 33.8 0.000 promoter-TSS (NM_004135) promoter-TSS (NM_004135) 52 NM_001204526 6748 Hs.409223 NM_006280 ENSG00000180879 SSR4 CDG1Y|TRAPD signal sequence receptor subunit 4 protein-coding chr5-90 chr5 172283872 172284082 + 33.8 0.000 promoter-TSS (NM_152277) promoter-TSS (NM_152277) -213 NM_152277 92181 Hs.131570 NM_152277 ENSG00000168246 UBTD2 DCUBP ubiquitin domain containing 2 protein-coding chr15-61 chr15 81324154 81324364 + 33.8 0.000 promoter-TSS (NR_135013) promoter-TSS (NR_135013) -74 NR_120365 101929655 Hs.696654 NR_120365 TMC3-AS1 - TMC3 antisense RNA 1 ncRNA chr10-281 chr10 103661538 103661748 + 33.8 0.000 intron (NM_001365079, intron 1 of 8) intron (NM_001365079, intron 1 of 8) 16572 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr14-123 chr14 103921563 103921773 + 33.8 0.000 promoter-TSS (NM_001127393) promoter-TSS (NM_001127393) -139 NM_004894 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr1-507 chr1 45266302 45266512 + 33.8 0.000 Intergenic LTR18B|LTR|ERVL -37503 NR_024270 400752 Hs.334348 NR_024270 ENSG00000281912 LINC01144 - long intergenic non-protein coding RNA 1144 ncRNA chr17-399 chr17 81200872 81201082 + 33.8 0.000 intron (NM_001319228, intron 7 of 25) L1ME2|LINE|L1 21988 NM_001009811 22994 Hs.514578 NM_014984 ENSG00000141577 CEP131 AZ1|AZI1|ZA1 centrosomal protein 131 protein-coding chr17-288 chr17 50095188 50095398 + 33.8 0.000 promoter-TSS (NM_001199899) promoter-TSS (NM_001199899) 18 NM_001199900 5164 Hs.256667 NM_002611 ENSG00000005882 PDK2 PDHK2|PDKII pyruvate dehydrogenase kinase 2 protein-coding chr16-142 chr16 89948581 89948791 + 33.8 0.000 promoter-TSS (NM_001242819) promoter-TSS (NM_001242819) -45 NM_001242821 54849 Hs.62771 NM_017702 ENSG00000140995 DEF8 - differentially expressed in FDCP 8 homolog protein-coding chr8-208 chr8 122601740 122601950 + 33.8 0.000 Intergenic L1ME4c|LINE|L1 -33201 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr7-377 chr7 31776711 31776921 + 33.8 0.000 intron (NM_001191059, intron 17 of 18) intron (NM_001191059, intron 17 of 18) 89601 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr5-270 chr5 77893583 77893793 + 33.8 0.000 intron (NR_105012, intron 1 of 1) intron (NR_105012, intron 1 of 1) 9032 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr17-247 chr17 4909153 4909363 + 33.8 0.000 Intergenic Intergenic -6160 NM_000080 1145 Hs.654535 NM_000080 ENSG00000108556 CHRNE ACHRE|CMS1D|CMS1E|CMS2A|CMS4A|CMS4B|CMS4C|FCCMS|SCCMS cholinergic receptor nicotinic epsilon subunit protein-coding chr3-353 chr3 187403801 187404011 + 33.8 0.000 Intergenic Intergenic 35521 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding chr2-358 chr2 54065471 54065681 + 33.8 0.000 intron (NM_001320587, intron 3 of 5) intron (NM_001320587, intron 3 of 5) -50039 NM_001320589 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr3-151 chr3 8501614 8501824 + 33.8 0.000 promoter-TSS (NM_001278234) promoter-TSS (NM_001278234) -61 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr8-119 chr8 22383594 22383804 + 33.8 0.000 intron (NM_001351656, intron 2 of 10) intron (NM_001351656, intron 2 of 10) -9137 NM_001351660 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr3-131 chr3 134486122 134486332 + 33.8 0.000 promoter-TSS (NM_001242374) promoter-TSS (NM_001242374) 54 NR_148352 80254 Hs.443301 NM_025180 ENSG00000182923 CEP63 SCKL6 centrosomal protein 63 protein-coding chr6-208 chr6 169190276 169190486 + 33.8 0.000 Intergenic Intergenic -7641 NR_125863 101929504 Hs.147721 NR_125863 ENSG00000261039 LINC02544 - long intergenic non-protein coding RNA 2544 ncRNA chr1-943 chr1 21783578 21783788 + 33.8 0.000 promoter-TSS (NM_001350168) promoter-TSS (NM_001350168) -484 NM_001330394 84196 Hs.467524 NM_032236 ENSG00000090686 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding chr21-62 chr21 17819416 17819626 + 33.8 0.000 promoter-TSS (NM_001100421) promoter-TSS (NM_001100421) -165 NM_017447 54149 Hs.293811 NM_017447 ENSG00000154642 C21orf91 C21orf14|C21orf38|CSSG1|EURL|YG81 chromosome 21 open reading frame 91 protein-coding chr14-121 chr14 104826266 104826476 + 33.8 0.000 Intergenic CpG 5170 NR_024396 196872 Hs.352220 NR_024396 ENSG00000258701 LINC00638 - long intergenic non-protein coding RNA 638 ncRNA chr19-400 chr19 2983255 2983465 + 33.8 0.000 intron (NM_001143986, intron 5 of 16) L2a|LINE|L2 5796 NM_001143986 79816 Hs.334507 NM_024760 ENSG00000104953 TLE6 GRG6|PREMBL TLE family member 6, subcortical maternal complex member protein-coding chr6-229 chr6 169097410 169097620 + 33.8 0.000 Intergenic Intergenic 29729 NR_134619 102724357 Hs.129310 NR_134619 ENSG00000234519 LOC102724357 - uncharacterized LOC102724357 ncRNA chr18-21 chr18 158352 158562 + 33.8 0.000 promoter-TSS (NM_005151) promoter-TSS (NM_005151) -100 NM_001037334 9097 Hs.464416 NM_005151 ENSG00000101557 USP14 TGT ubiquitin specific peptidase 14 protein-coding chr2-309 chr2 54360208 54360418 + 33.8 0.000 exon (NM_001100396, exon 5 of 5) exon (NM_001100396, exon 5 of 5) 29429 NM_001369401 129852 Hs.732626 NM_173486 ENSG00000177994 C2orf73 - chromosome 2 open reading frame 73 protein-coding chr12-216 chr12 27193993 27194203 + 33.8 0.000 Intergenic Intergenic -50188 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr12-91 chr12 39443161 39443371 + 33.8 0.000 promoter-TSS (NM_001173463) promoter-TSS (NM_001173463) -146 NM_001173465 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr1-581 chr1 15949097 15949307 + 33.8 0.000 intron (NM_001287603, intron 2 of 15) intron (NM_001287603, intron 2 of 15) 26930 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr10-194 chr10 77393005 77393215 + 33.8 0.000 intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 42238 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr12-166 chr12 30755046 30755256 + 33.8 0.000 promoter-TSS (NM_001319846) promoter-TSS (NM_001319846) 77 NR_135046 645485 Hs.232332 NR_135046 ENSG00000246331 LOC645485 - uncharacterized LOC645485 ncRNA chr17-561 chr17 48002664 48002874 + 33.7 0.000 Intergenic Plat_L3|LINE|CR1 -30113 NR_162100 113218499 NR_162100 MIR10226 - microRNA 10226 ncRNA chr2-371 chr2 45353947 45354157 + 33.7 0.000 Intergenic MER4CL34|LTR|ERV1 -99111 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr10-297 chr10 80079173 80079383 + 33.7 0.000 promoter-TSS (NR_027428) promoter-TSS (NR_027428) 33 NR_072986 80195 Hs.169982 NM_025125 ENSG00000133678 TMEM254 C10orf57|bA369J21.6 transmembrane protein 254 protein-coding chr9-377 chr9 111958098 111958308 + 33.7 0.000 Intergenic LTR91|LTR|ERVL 26103 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr16-347 chr16 86680246 86680456 + 33.7 0.000 Intergenic Intergenic 41608 NR_135181 101928614 Hs.399823 NR_135181 ENSG00000260026 LINC02189 - long intergenic non-protein coding RNA 2189 ncRNA chr22-74 chr22 36028981 36029191 + 33.7 0.000 promoter-TSS (NM_001349999) promoter-TSS (NM_001349999) -262 NM_001082578 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr6-157 chr6 140537930 140538140 + 33.7 0.000 Intergenic Intergenic -145779 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr8-150 chr8 133504194 133504404 + 33.7 0.000 intron (NM_003033, intron 2 of 8) intron (NM_003033, intron 2 of 8) 67588 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr19-424 chr19 47244216 47244426 + 33.7 0.000 Intergenic CpG -11654 NM_001127242 27113 Hs.467020 NM_014417 ENSG00000105327 BBC3 JFY-1|JFY1|PUMA BCL2 binding component 3 protein-coding chr19-694 chr19 33880234 33880444 + 33.7 0.000 Intergenic Intergenic 83469 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr14-193 chr14 39170451 39170661 + 33.7 0.000 promoter-TSS (NM_177452) promoter-TSS (NM_177452) -223 NM_001079537 122553 Hs.13303 NM_177452 ENSG00000182400 TRAPPC6B NEDMEBA|TPC6 trafficking protein particle complex 6B protein-coding chr17-302 chr17 18856090 18856300 + 33.7 0.000 promoter-TSS (NM_001353102) promoter-TSS (NM_001353102) -104 NM_001243942 5636 Hs.632236 NM_002767 ENSG00000141127 PRPSAP2 PAP41 phosphoribosyl pyrophosphate synthetase associated protein 2 protein-coding chr8-287 chr8 96522960 96523170 + 33.7 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) 29252 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr4-123 chr4 7134761 7134971 + 33.7 0.000 Intergenic Intergenic -31490 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr2-425 chr2 96740054 96740264 + 33.7 0.000 promoter-TSS (NM_001142292) promoter-TSS (NM_001142292) -67 NM_001322351 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr3-168 chr3 49132924 49133134 + 33.7 0.000 promoter-TSS (NM_002292) promoter-TSS (NM_002292) 21 NM_002292 3913 Hs.439726 NM_002292 ENSG00000172037 LAMB2 LAMS|NPHS5 laminin subunit beta 2 protein-coding chr17-112 chr17 4366540 4366750 + 33.7 0.000 promoter-TSS (NM_003342) promoter-TSS (NM_003342) 29 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr19-523 chr19 15251748 15251958 + 33.7 0.000 intron (NM_014299, intron 11 of 11) intron (NM_014299, intron 11 of 11) -18806 NM_001142886 79852 Hs.156457 NM_024794 ENSG00000105131 EPHX3 ABHD9|EH3 epoxide hydrolase 3 protein-coding chr11-358 chr11 69075550 69075760 + 33.7 0.000 intron (NM_139075, intron 13 of 24) intron (NM_139075, intron 13 of 24) -7521 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr12-207 chr12 13163940 13164150 + 33.7 0.000 Intergenic Intergenic -32681 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr9-153 chr9 20684107 20684317 + 33.7 0.000 intron (NR_121601, intron 1 of 1) CpG 538 NR_121601 101929548 Hs.668302 NR_121601 ENSG00000227071 FOCAD-AS1 - FOCAD antisense RNA 1 ncRNA chr7-78 chr7 100429425 100429635 + 33.7 0.000 promoter-TSS (NM_017984) promoter-TSS (NM_017984) 83 NM_001363486 56257 Hs.178011 NM_019606 ENSG00000146834 MEPCE BCDIN3 methylphosphate capping enzyme protein-coding chr5-97 chr5 126680381 126680591 + 33.7 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 48781 NM_207408 389320 Hs.177983 NM_207408 ENSG00000196900 TEX43 C5orf48|Tseg7 testis expressed 43 protein-coding chr4-147 chr4 88823317 88823527 + 33.7 0.000 promoter-TSS (NM_001265580) promoter-TSS (NM_001265580) -61 NM_001265579 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr18-74 chr18 59139552 59139762 + 33.7 0.000 promoter-TSS (NM_033280) promoter-TSS (NM_033280) -227 NM_001307941 90701 Hs.45107 NM_033280 ENSG00000166562 SEC11C SEC11L3|SPC21|SPCS4C SEC11 homolog C, signal peptidase complex subunit protein-coding chr17-226 chr17 4953554 4953764 + 33.7 0.000 intron (NM_053013, intron 5 of 11) intron (NM_053013, intron 5 of 11) 2540 NM_001193503 2027 Hs.224171 NM_001976 ENSG00000108515 ENO3 GSD13|MSE enolase 3 protein-coding chr6-193 chr6 44265326 44265536 + 33.7 0.000 exon (NM_004556, exon 1 of 6) exon (NM_004556, exon 1 of 6) 357 NM_004556 4794 Hs.458276 NM_004556 ENSG00000146232 NFKBIE IKBE NFKB inhibitor epsilon protein-coding chr17-329 chr17 80984819 80985029 + 33.7 0.000 Intergenic Intergenic -6917 NM_024591 79643 Hs.514560 NM_024591 ENSG00000176108 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding chr8-254 chr8 38459259 38459469 + 33.7 0.000 intron (NM_023105, intron 1 of 16) intron (NM_023105, intron 1 of 16) 8360 NM_001174066 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr13-264 chr13 21069724 21069934 + 33.6 0.000 Intergenic Intergenic -8243 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr13-42 chr13 29595834 29596044 + 33.6 0.000 promoter-TSS (NM_003045) promoter-TSS (NM_003045) -251 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr12-226 chr12 53441500 53441710 + 33.6 0.000 promoter-TSS (NM_001005354) promoter-TSS (NM_001005354) -44 NM_001005354 54458 Hs.744894 NM_018457 ENSG00000205352 PRR13 TXR1 proline rich 13 protein-coding chr2-583 chr2 97869379 97869589 + 33.6 0.000 intron (NM_015348, intron 4 of 40) intron (NM_015348, intron 4 of 40) 126464 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr15-109 chr15 63950987 63951197 + 33.6 0.000 intron (NM_014326, intron 4 of 11) intron (NM_014326, intron 4 of 11) 22818 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr16-283 chr16 84994813 84995023 + 33.6 0.000 intron (NM_001145548, intron 2 of 8) intron (NM_001145548, intron 2 of 8) 16617 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr17-229 chr17 48908254 48908464 + 33.6 0.000 promoter-TSS (NM_023079) promoter-TSS (NM_023079) -48 NM_023079 65264 Hs.514297 NM_023079 ENSG00000159202 UBE2Z HOYS7|USE1 ubiquitin conjugating enzyme E2 Z protein-coding chr4-101 chr4 102827932 102828142 + 33.6 0.000 promoter-TSS (NM_181886) promoter-TSS (NM_181886) -18 NR_131186 105377348 Hs.661187 NR_131185 ENSG00000246560 UBE2D3-AS1 - UBE2D3 antisense RNA 1 ncRNA chr8-194 chr8 18209921 18210131 + 33.6 0.000 promoter-TSS (NM_001160173) promoter-TSS (NM_001160173) -77 NM_001160173 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr1-828 chr1 183757112 183757322 + 33.6 0.000 intron (NM_001297669, intron 3 of 18) intron (NM_001297669, intron 3 of 18) -47903 NM_001297671 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr20-170 chr20 17959741 17959951 + 33.6 0.000 intron (NM_001282454, intron 1 of 12) intron (NM_001282454, intron 1 of 12) 3100 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr1-256 chr1 46247441 46247651 + 33.6 0.000 promoter-TSS (NM_001370766) promoter-TSS (NM_001370766) -142 NM_001370766 8438 Hs.642042 NM_003579 ENSG00000085999 RAD54L HR54|RAD54A|hHR54|hRAD54 RAD54 like protein-coding chr20-62 chr20 45833564 45833774 + 33.6 0.000 promoter-TSS (NM_001042632) promoter-TSS (NM_001042632) -130 NM_001042632 90203 Hs.472854 NM_033421 ENSG00000124104 SNX21 C20orf161|PP3993|SNX-L|dJ337O18.4 sorting nexin family member 21 protein-coding chr10-121 chr10 27100283 27100493 + 33.6 0.000 5' UTR (NM_001256053, exon 1 of 34) 5' UTR (NM_001256053, exon 1 of 34) 110 NM_014915 22852 Hs.361041 NM_014915 ENSG00000107890 ANKRD26 THC2|bA145E8.1 ankyrin repeat domain 26 protein-coding chr8-57 chr8 41529046 41529256 + 33.6 0.000 promoter-TSS (NM_032336) promoter-TSS (NM_032336) -110 NM_032336 84296 Hs.656996 NM_032336 ENSG00000147536 GINS4 SLD5 GINS complex subunit 4 protein-coding chr10-209 chr10 82982227 82982437 + 33.6 0.000 intron (NR_163253, intron 10 of 10) intron (NR_163253, intron 10 of 10) 694757 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr17-149 chr17 77427713 77427923 + 33.6 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) 22741 NM_001293696 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr9-155 chr9 134328348 134328558 + 33.6 0.000 intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) 1998 NM_002957 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr14-285 chr14 54713472 54713682 + 33.6 0.000 intron (NM_001161576, intron 2 of 10) intron (NM_001161576, intron 2 of 10) -41256 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr17-143 chr17 7014680 7014890 + 33.6 0.000 promoter-TSS (NM_001142798) promoter-TSS (NM_001142798) 3 NM_174893 124944 Hs.511801 NM_174893 ENSG00000258315 C17orf49 BAP18|HEPIS chromosome 17 open reading frame 49 protein-coding chr11-470 chr11 12693803 12694013 + 33.6 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 19487 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr6-204 chr6 158057592 158057802 + 33.6 0.000 intron (NM_003898, intron 6 of 26) LTR79|LTR|ERVL 40604 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr2-337 chr2 240840533 240840743 + 33.6 0.000 Intergenic Intergenic -20330 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr18-63 chr18 63553221 63553431 + 33.6 0.000 Intergenic MIR3|SINE|MIR -2834 NM_001307928 89777 Hs.348541 NM_080474 ENSG00000166634 SERPINB12 YUKOPIN serpin family B member 12 protein-coding chr7-415 chr7 134432448 134432658 + 33.6 0.000 Intergenic MER1A|DNA|hAT-Charlie 26547 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr7-263 chr7 47501468 47501678 + 33.6 0.000 intron (NM_022748, intron 3 of 30) intron (NM_022748, intron 3 of 30) -36770 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr20-41 chr20 34876150 34876360 + 33.6 0.000 promoter-TSS (NM_018677) promoter-TSS (NM_018677) -270 NM_001076552 55902 Hs.517034 NM_018677 ENSG00000131069 ACSS2 ACAS2|ACECS|ACS|ACSA|dJ1161H23.1 acyl-CoA synthetase short chain family member 2 protein-coding chr5-369 chr5 14901172 14901382 + 33.6 0.000 Intergenic Intergenic -29499 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr2-472 chr2 143489270 143489480 + 33.6 0.000 intron (NM_018460, intron 9 of 13) intron (NM_018460, intron 9 of 13) 359956 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr16-409 chr16 3443492 3443702 + 33.6 0.000 promoter-TSS (NM_001317093) promoter-TSS (NM_001317093) -14 NM_001317093 79903 Hs.513296 NM_024845 ENSG00000122390 NAA60 HAT4|NAT15|NatF|hNaa60 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding chr5-199 chr5 150790376 150790586 + 33.6 0.000 intron (NM_032947, intron 1 of 1) intron (NM_032947, intron 1 of 1) 12535 NM_032947 85027 Hs.29444 NM_032947 ENSG00000256235 SMIM3 C5orf62|MST150|NID67 small integral membrane protein 3 protein-coding chr1-1192 chr1 45864848 45865058 + 33.6 0.000 5' UTR (NM_001324321, exon 1 of 29) 5' UTR (NM_001324321, exon 1 of 29) 605 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr9-458 chr9 116952175 116952385 + 33.5 0.000 intron (NM_014010, intron 9 of 21) MER117|DNA|hAT-Charlie 228921 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr4-234 chr4 149164399 149164609 + 33.5 0.000 intron (NR_125887, intron 2 of 12) intron (NR_125887, intron 2 of 12) 10209 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr19-234 chr19 1169099 1169309 + 33.5 0.000 intron (NM_014963, intron 1 of 31) intron (NM_014963, intron 1 of 31) 5064 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr10-267 chr10 681908 682118 + 33.5 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) 7655 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr9-367 chr9 99820135 99820345 + 33.5 0.000 promoter-TSS (NR_109802) promoter-TSS (NR_109802) -351 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr19-404 chr19 37172734 37172944 + 33.5 0.000 promoter-TSS (NR_110152) promoter-TSS (NR_110152) -98 NM_152655 199704 Hs.659236 NM_152655 ENSG00000196967 ZNF585A - zinc finger protein 585A protein-coding chr7-198 chr7 102396022 102396232 + 33.5 0.000 promoter-TSS (NM_024653) promoter-TSS (NM_024653) -236 NM_024653 79706 Hs.722104 NM_024653 ENSG00000128563 PRKRIP1 C114|KRBOX3 PRKR interacting protein 1 protein-coding chr1-340 chr1 205284818 205285028 + 33.5 0.000 Intergenic Intergenic 27726 NM_001331034 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr1-706 chr1 16164315 16164525 + 33.5 0.000 Intergenic MIR|SINE|MIR -8351 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr12-353 chr12 1443983 1444193 + 33.5 0.000 intron (NR_027948, intron 18 of 19) intron (NR_027948, intron 18 of 19) -56403 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr8-182 chr8 37798667 37798877 + 33.5 0.000 intron (NM_032777, intron 1 of 18) intron (NM_032777, intron 1 of 18) 1889 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr1-432 chr1 201384169 201384379 + 33.5 0.000 intron (NM_005558, intron 5 of 9) intron (NM_005558, intron 5 of 9) -6594 NM_001001432 7139 Hs.533613 NM_000364 ENSG00000118194 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T2, cardiac type protein-coding chr1-301 chr1 42924401 42924611 + 33.5 0.000 TTS (NM_006516) TTS (NM_006516) 34362 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr19-483 chr19 36378975 36379185 + 33.5 0.000 intron (NM_001297619, intron 1 of 4) CpG 121 NM_001297619 57677 Hs.35524 NM_020917 ENSG00000142065 ZFP14 ZNF531 ZFP14 zinc finger protein protein-coding chr2-247 chr2 127107140 127107350 + 33.5 0.000 promoter-TSS (NM_139351) promoter-TSS (NM_139351) -91 NM_139345 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr17-351 chr17 80789592 80789802 + 33.5 0.000 intron (NM_020761, intron 6 of 33) intron (NM_020761, intron 6 of 33) 15935 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr12-292 chr12 43208727 43208937 + 33.5 0.000 Intergenic Intergenic 53517 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr5-237 chr5 123511961 123512171 + 33.5 0.000 promoter-TSS (NM_001364141) promoter-TSS (NM_001364141) -33 NM_001031812 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr5-151 chr5 135391219 135391429 + 33.5 0.000 intron (NM_004893, intron 1 of 8) intron (NM_004893, intron 1 of 8) 7914 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr2-348 chr2 149648774 149648984 + 33.5 0.000 intron (NR_110240, intron 1 of 2) intron (NR_110240, intron 1 of 2) -61104 NM_015702 27249 Hs.5324 NM_015702 ENSG00000168288 MMADHC C2orf25|CL25022|cblD metabolism of cobalamin associated D protein-coding chr7-146 chr7 43869470 43869680 + 33.5 0.000 promoter-TSS (NM_032014) promoter-TSS (NM_032014) -58 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr19-356 chr19 18224536 18224746 + 33.5 0.000 promoter-TSS (NM_001098819) promoter-TSS (NM_001098819) -148 NM_001098819 5143 Hs.132584 NM_000923 ENSG00000105650 PDE4C DPDE1|PDE21 phosphodiesterase 4C protein-coding chr1-583 chr1 30933958 30934168 + 33.5 0.000 intron (NM_001020658, intron 21 of 21) intron (NM_001020658, intron 21 of 21) 1713 NR_004054 692234 NR_004054 SNORD103A U103 small nucleolar RNA, C/D box 103A snoRNA chr19-551 chr19 4813008 4813218 + 33.5 0.000 Intergenic Intergenic 18629 NM_182919 148022 Hs.29344 NM_014261 ENSG00000127666 TICAM1 IIAE6|MyD88-3|PRVTIRB|TICAM-1|TRIF toll like receptor adaptor molecule 1 protein-coding chr22-169 chr22 50251128 50251338 + 33.5 0.000 promoter-TSS (NM_001159286) promoter-TSS (NM_001159286) 32 NM_001159286 83933 Hs.26593 NM_032019 ENSG00000100429 HDAC10 HD10 histone deacetylase 10 protein-coding chr5-236 chr5 115377582 115377792 + 33.5 0.000 Intergenic Intergenic -81033 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr8-354 chr8 96405190 96405400 + 33.5 0.000 Intergenic Intergenic -17857 NR_125828 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr10-429 chr10 32446123 32446333 + 33.5 0.000 promoter-TSS (NR_120660) promoter-TSS (NR_120660) 88 NR_109826 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding chr18-71 chr18 77101533 77101743 + 33.5 0.000 intron (NM_001025100, intron 2 of 3) intron (NM_001025100, intron 2 of 3) 31145 NM_001025100 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr21-30 chr21 39183436 39183646 + 33.3 0.000 promoter-TSS (NM_203433) promoter-TSS (NM_203433) -27 NM_001261824 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chr2-356 chr2 23286909 23287119 + 33.3 0.000 Intergenic Intergenic -98165 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr18-48 chr18 56651092 56651302 + 33.3 0.000 promoter-TSS (NM_052834) promoter-TSS (NM_052834) -188 NM_015285 23335 Hs.465213 NM_015285 ENSG00000091157 WDR7 TRAG WD repeat domain 7 protein-coding chr2-256 chr2 23926880 23927090 + 33.3 0.000 non-coding (NR_125717, exon 1 of 29) non-coding (NR_125717, exon 1 of 29) 138 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr8-180 chr8 122828315 122828525 + 33.3 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 46765 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr12-211 chr12 751241 751451 + 33.3 0.000 Intergenic Intergenic -1233 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr8-103 chr8 100950457 100950667 + 33.3 0.000 promoter-TSS (NM_001135702) promoter-TSS (NM_001135702) 9 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr6-78 chr6 43171193 43171403 + 33.3 0.000 promoter-TSS (NM_003131) promoter-TSS (NM_003131) 29 NM_003131 6722 Hs.520140 NM_003131 ENSG00000112658 SRF MCM1 serum response factor protein-coding chr22-132 chr22 45757213 45757423 + 33.3 0.000 intron (NM_013236, intron 9 of 11) intron (NM_013236, intron 9 of 11) -3206 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr6-258 chr6 119541244 119541454 + 33.3 0.000 Intergenic L1MEf|LINE|L1 -8459 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr9-114 chr9 109119878 109120088 + 33.3 0.000 promoter-TSS (NM_032012) promoter-TSS (NM_032012) -36 NM_032012 23731 Hs.308074 NM_032012 ENSG00000106771 TMEM245 C9orf5|CG-2|CG2 transmembrane protein 245 protein-coding chr19-394 chr19 21329234 21329444 + 33.3 0.000 promoter-TSS (NM_021269) promoter-TSS (NM_021269) 71 NM_021269 7562 Hs.466296 NM_021269 ENSG00000182141 ZNF708 KOX8|ZNF15|ZNF15L1 zinc finger protein 708 protein-coding chr6-206 chr6 158214304 158214514 + 33.3 0.000 Intergenic AluJr|SINE|Alu 46062 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr22-182 chr22 20531365 20531575 + 33.3 0.000 intron (NM_001293237, intron 1 of 16) MIRb|SINE|MIR 23423 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr3-240 chr3 184176484 184176694 + 33.3 0.000 intron (NM_001311198, intron 1 of 12) intron (NM_001311198, intron 1 of 12) 1734 NM_004068 1173 Hs.518460 NM_004068 ENSG00000161203 AP2M1 AP50|CLAPM1|mu2 adaptor related protein complex 2 subunit mu 1 protein-coding chr4-196 chr4 148574555 148574765 + 33.3 0.000 Intergenic Intergenic -129962 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr17-261 chr17 47100260 47100470 + 33.3 0.000 Intergenic CpG 88930 NR_148340 996 Hs.463295 NM_001256 ENSG00000004897 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding chr10-420 chr10 113087393 113087603 + 33.3 0.000 intron (NM_001198528, intron 4 of 14) intron (NM_001198528, intron 4 of 14) -39135 NM_001349871 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr2-369 chr2 226478375 226478585 + 33.3 0.000 Intergenic Intergenic 180313 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr16-213 chr16 55500082 55500292 + 33.3 0.000 intron (NM_001127891, intron 11 of 12) intron (NM_001127891, intron 11 of 12) -8885 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding chr11-142 chr11 69048745 69048955 + 33.3 0.000 promoter-TSS (NM_139075) promoter-TSS (NM_139075) -82 NM_139075 219931 Hs.131851 NM_139075 ENSG00000162341 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding chr17-403 chr17 59619384 59619594 + 33.3 0.000 promoter-TSS (NM_004859) promoter-TSS (NM_004859) -200 NM_001288653 1213 Hs.491351 NM_004859 ENSG00000141367 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc|MRD56 clathrin heavy chain protein-coding chr1-330 chr1 26693025 26693235 + 33.3 0.000 non-coding (NR_135804, exon 1 of 1) non-coding (NR_135804, exon 1 of 1) 1001 NR_135804 101928728 Hs.128770 NR_135804 ENSG00000260063 LOC101928728 - uncharacterized LOC101928728 ncRNA chr19-398 chr19 58440194 58440404 + 33.3 0.000 promoter-TSS (NM_003433) promoter-TSS (NM_003433) -146 NM_003433 7691 Hs.156169 NM_003433 ENSG00000131849 ZNF132 pHZ-12 zinc finger protein 132 protein-coding chr15-104 chr15 90165782 90165992 + 33.3 0.000 Intergenic Intergenic -19033 NM_001324029 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr16-267 chr16 89320359 89320569 + 33.3 0.000 promoter-TSS (NM_001242885) promoter-TSS (NM_001242885) -669 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr22-45 chr22 45997539 45997749 + 33.3 0.000 Intergenic Intergenic -8972 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo chr19-737 chr19 12401168 12401378 + 33.3 0.000 promoter-TSS (NM_001322497) promoter-TSS (NM_001322497) 1 NM_001322498 90576 Hs.546637 NM_203381 ENSG00000196466 ZNF799 HIT-40|ZNF842 zinc finger protein 799 protein-coding chr7-344 chr7 44378747 44378957 + 33.3 0.000 TTS (NM_015332) TTS (NM_015332) -53221 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr14-219 chr14 23071483 23071693 + 33.3 0.000 promoter-TSS (NM_001164817) promoter-TSS (NM_001164817) -19 NM_001164816 22985 Hs.124490 NM_014977 ENSG00000100813 ACIN1 ACINUS|ACN|fSAP152 apoptotic chromatin condensation inducer 1 protein-coding chr19-276 chr19 3185583 3185793 + 33.3 0.000 promoter-TSS (NM_001321463) promoter-TSS (NM_001321463) -242 NM_020170 56926 Hs.657032 NM_020170 ENSG00000125912 NCLN NET59 nicalin protein-coding chr10-411 chr10 14648269 14648479 + 33.3 0.000 intron (NM_001282695, intron 2 of 5) UCON25|Unknown|Unknown -43973 NM_001282697 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr10-400 chr10 7819207 7819417 + 33.3 0.000 intron (NM_031923, intron 1 of 6) intron (NM_031923, intron 1 of 6) 807 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding chr11-360 chr11 75419057 75419267 + 33.3 0.000 intron (NM_001256802, intron 6 of 6) Looper|DNA|PiggyBac 11467 NM_001039548 283212 Hs.292451 NM_173583 ENSG00000149243 KLHL35 - kelch like family member 35 protein-coding chr7-129 chr7 816503 816713 + 33.3 0.000 promoter-TSS (NM_001367665) promoter-TSS (NM_001367665) -35 NM_001367664 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr9-296 chr9 128001739 128001949 + 33.3 0.000 Intergenic Intergenic -20855 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr19-476 chr19 48900092 48900302 + 33.3 0.000 promoter-TSS (NM_006184) promoter-TSS (NM_006184) -115 NM_006184 4924 Hs.631602 NM_006184 ENSG00000104805 NUCB1 CALNUC|NUC nucleobindin 1 protein-coding chr10-174 chr10 14838101 14838311 + 33.3 0.000 promoter-TSS (NM_016299) promoter-TSS (NM_016299) 46 NM_001278205 51182 Hs.534169 NM_016299 ENSG00000187522 HSPA14 HSP70-4|HSP70L1 heat shock protein family A (Hsp70) member 14 protein-coding chr12-167 chr12 48716754 48716964 + 33.3 0.000 promoter-TSS (NM_001277842) promoter-TSS (NM_001277842) -152 NM_001277842 904 Hs.92308 NM_001240 ENSG00000129315 CCNT1 CCNT|CYCT1|HIVE1 cyclin T1 protein-coding chr17-405 chr17 64145816 64146026 + 33.3 0.000 promoter-TSS (NR_132278) promoter-TSS (NR_132278) -49 NR_132278 105376843 Hs.405444 NR_132278 ENSG00000266402 SNHG25 - small nucleolar RNA host gene 25 ncRNA chr3-220 chr3 143001301 143001511 + 33.3 0.000 promoter-TSS (NM_001320222) promoter-TSS (NM_001320222) 61 NR_034032 100289361 Hs.599649 NR_034032 ENSG00000268129 LOC100289361 - uncharacterized LOC100289361 ncRNA chr1-437 chr1 246214993 246215203 + 33.3 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 202314 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr11-364 chr11 8688863 8689073 + 33.3 0.000 3' UTR (NM_000990, exon 5 of 5) 3' UTR (NM_000990, exon 5 of 5) 3529 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr11-251 chr11 74398597 74398807 + 33.2 0.000 promoter-TSS (NM_173582) promoter-TSS (NM_173582) -269 NM_173582 283209 Hs.26612 NM_173582 ENSG00000165434 PGM2L1 BM32A|PMMLP phosphoglucomutase 2 like 1 protein-coding chr9-406 chr9 20512193 20512403 + 33.2 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) -9956 NR_039685 100616441 NR_039685 ENSG00000264941 MIR4474 - microRNA 4474 ncRNA chr12-406 chr12 57389233 57389443 + 33.2 0.000 intron (NM_001351217, intron 1 of 21) intron (NM_001351217, intron 1 of 21) 41705 NM_001330121 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr11-633 chr11 40329331 40329541 + 33.2 0.000 intron (NM_020929, intron 2 of 4) L3|LINE|CR1 -36306 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr20-85 chr20 36605675 36605885 + 33.2 0.000 promoter-TSS (NM_199483) promoter-TSS (NM_199483) 1 NM_199483 55969 Hs.584985 NM_018840 ENSG00000101084 RAB5IF C20orf24|PNAS-11|RIP5 RAB5 interacting factor protein-coding chr20-159 chr20 62301947 62302157 + 33.2 0.000 promoter-TSS (NM_175573) promoter-TSS (NM_175573) -844 NM_001281438 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr6-112 chr6 73654106 73654316 + 33.2 0.000 promoter-TSS (NM_012434) promoter-TSS (NM_012434) -219 NM_012434 26503 Hs.597422 NM_012434 ENSG00000119899 SLC17A5 AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 member 5 protein-coding chr12-156 chr12 114684342 114684552 + 33.2 0.000 promoter-TSS (NM_005996) promoter-TSS (NM_005996) -272 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr1-397 chr1 154272193 154272403 + 33.2 0.000 promoter-TSS (NM_001018837) promoter-TSS (NM_001018837) -265 NM_006118 10456 Hs.199625 NM_006118 ENSG00000143575 HAX1 HCLSBP1|HS1BP1|SCN3 HCLS1 associated protein X-1 protein-coding chr3-302 chr3 196219333 196219543 + 33.2 0.000 intron (NM_152672, intron 2 of 8) intron (NM_152672, intron 2 of 8) 2904 NM_152672 200931 Hs.630585 NM_152672 ENSG00000163959 SLC51A OSTA|OSTalpha solute carrier family 51 alpha subunit protein-coding chr10-240 chr10 104300923 104301133 + 33.2 0.000 3' UTR (NM_183239, exon 7 of 7) 3' UTR (NM_183239, exon 7 of 7) -22336 NR_120622 101927472 Hs.670333 NR_120622 ITPRIP-AS1 - ITPRIP antisense RNA 1 ncRNA chr5-505 chr5 38925591 38925801 + 33.2 0.000 intron (NM_003999, intron 15 of 17) intron (NM_003999, intron 15 of 17) 79684 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr16-117 chr16 352908 353118 + 33.2 0.000 promoter-TSS (NM_181050) promoter-TSS (NM_181050) -290 NM_181050 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr1-534 chr1 224356818 224357028 + 33.2 0.000 promoter-TSS (NM_014184) promoter-TSS (NM_014184) 44 NM_014184 29097 Hs.445890 NM_014184 ENSG00000143771 CNIH4 CNIH-4|CNIH2|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding chr14-244 chr14 65019978 65020188 + 33.2 0.000 intron (NM_002028, intron 4 of 11) intron (NM_002028, intron 4 of 11) -24605 NR_039855 100616490 NR_039855 ENSG00000266531 MIR4706 mir-4706 microRNA 4706 ncRNA chr5-378 chr5 151699278 151699488 + 33.2 0.000 Intergenic Intergenic -12468 NM_003118 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr19-478 chr19 57410948 57411158 + 33.2 0.000 promoter-TSS (NM_006959) promoter-TSS (NM_006959) -94 NM_001330617 7565 Hs.729403 NM_006959 ENSG00000186272 ZNF17 HPF3|KOX10 zinc finger protein 17 protein-coding chr19-381 chr19 12163017 12163227 + 33.2 0.000 promoter-TSS (NM_003437) promoter-TSS (NM_003437) 26 NM_003437 7695 Hs.479874 NM_003437 ENSG00000196646 ZNF136 pHZ-20 zinc finger protein 136 protein-coding chr2-255 chr2 161308381 161308591 + 33.2 0.000 promoter-TSS (NM_005805) promoter-TSS (NM_005805) 61 NM_005805 10213 Hs.740477 NM_005805 ENSG00000115233 PSMD14 PAD1|POH1|RPN11 proteasome 26S subunit, non-ATPase 14 protein-coding chr16-189 chr16 70439139 70439349 + 33.2 0.000 promoter-TSS (NM_006927) promoter-TSS (NM_006927) -144 NM_006927 6483 Hs.368611 NM_006927 ENSG00000157350 ST3GAL2 Gal-NAc6S|SIAT4B|ST3GALII|ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding chr2-698 chr2 226583792 226584002 + 33.2 0.000 Intergenic Intergenic 74896 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr10-65 chr10 97687298 97687508 + 33.2 0.000 promoter-TSS (NM_021732) promoter-TSS (NM_021732) -162 NM_021732 60370 Hs.23918 NM_021732 ENSG00000119986 AVPI1 PP5395|VIP32|VIT32 arginine vasopressin induced 1 protein-coding chr5-316 chr5 149486095 149486305 + 33.2 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 55554 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr2-236 chr2 38751463 38751673 + 33.2 0.000 promoter-TSS (NM_001195446) promoter-TSS (NM_001195446) -74 NM_001363802 6432 Hs.309090 NM_006276 ENSG00000115875 SRSF7 9G8|AAG3|SFRS7 serine and arginine rich splicing factor 7 protein-coding chr2-579 chr2 27628830 27629040 + 33.2 0.000 promoter-TSS (NM_001142683) promoter-TSS (NM_001142683) -57 NM_001142683 79635 Hs.21081 NM_024584 ENSG00000176714 CCDC121 - coiled-coil domain containing 121 protein-coding chr7-221 chr7 43785443 43785653 + 33.2 0.000 intron (NM_001253823, intron 3 of 8) LTR33B|LTR|ERVL 26868 NM_000712 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chr7-229 chr7 64794262 64794472 + 33.2 0.000 promoter-TSS (NM_001271639) promoter-TSS (NM_001271639) -61 NM_001367576 7697 Hs.184080 NM_006524 ENSG00000197008 ZNF138 pHZ-32 zinc finger protein 138 protein-coding chr10-123 chr10 104121802 104122012 + 33.2 0.000 promoter-TSS (NM_145247) promoter-TSS (NM_145247) -151 NM_145247 119392 Hs.93667 NM_145247 ENSG00000156384 SFR1 C10orf78|MEI5|MEIR5|bA373N18.1 SWI5 dependent homologous recombination repair protein 1 protein-coding chr2-331 chr2 73234322 73234532 + 33.2 0.000 intron (NM_001009570, intron 1 of 6) CpG-16154 119 NM_006429 10574 Hs.368149 NM_006429 ENSG00000135624 CCT7 CCTETA|CCTH|NIP7-1|TCP1ETA chaperonin containing TCP1 subunit 7 protein-coding chr2-714 chr2 120287254 120287464 + 33.2 0.000 intron (NM_001369400, intron 3 of 4) intron (NM_001369400, intron 3 of 4) 34507 NM_001369400 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr2-413 chr2 148020181 148020391 + 33.2 0.000 promoter-TSS (NM_018328) promoter-TSS (NM_018328) 451 NM_001190882 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr20-132 chr20 37295015 37295225 + 33.2 0.000 intron (NM_001003897, intron 1 of 2) intron (NM_001003897, intron 1 of 2) 5465 NM_022077 63905 Hs.6126 NM_022077 ENSG00000101363 MANBAL - mannosidase beta like protein-coding chr7-227 chr7 47475326 47475536 + 33.2 0.000 intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) -10628 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr8-39 chr8 22599689 22599899 + 33.2 0.000 intron (NM_001198827, intron 1 of 5) CpG 193 NM_001198827 541565 Hs.743508 NM_173686 ENSG00000241852 C8orf58 - chromosome 8 open reading frame 58 protein-coding chr5-274 chr5 149345324 149345534 + 33.2 0.000 promoter-TSS (NM_152407) promoter-TSS (NM_152407) -70 NM_152407 134266 Hs.511816 NM_152407 ENSG00000164284 GRPEL2 Mt-GrpE#2 GrpE like 2, mitochondrial protein-coding chr16-398 chr16 89972513 89972723 + 33.2 0.000 promoter-TSS (NR_003226) promoter-TSS (NR_003226) 38 NR_003227 172 Hs.534773 NM_001132 ENSG00000223959 AFG3L1P AFG3|AFG3L1 AFG3 like matrix AAA peptidase subunit 1, pseudogene pseudo chr3-235 chr3 128061036 128061246 + 33.2 0.000 intron (NM_013336, intron 7 of 11) MIRc|SINE|MIR 8704 NM_013336 29927 Hs.518236 NM_013336 ENSG00000058262 SEC61A1 HNFJ4|HSEC61|SEC61|SEC61A SEC61 translocon alpha 1 subunit protein-coding chr1-446 chr1 52055158 52055368 + 33.2 0.000 promoter-TSS (NM_001136497) promoter-TSS (NM_001136497) 908 NR_046406 51060 Hs.476033 NM_015913 ENSG00000117862 TXNDC12 AG1|AGR1|ERP16|ERP18|ERP19|PDIA16|TLP19|hAG-1|hTLP19 thioredoxin domain containing 12 protein-coding chr13-90 chr13 75685318 75685528 + 33.2 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 49093 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr8-21 chr8 143267291 143267501 + 33.2 0.000 promoter-TSS (NM_138465) promoter-TSS (NM_138465) -49 NM_138465 2738 Hs.400533 NM_138465 ENSG00000250571 GLI4 HKR4|ZNF928 GLI family zinc finger 4 protein-coding chr1-245 chr1 151992590 151992800 + 33.2 0.000 intron (NM_002966, intron 1 of 2) intron (NM_002966, intron 1 of 2) 1164 NM_002966 6281 Hs.143873 NM_002966 ENSG00000197747 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding chr3-268 chr3 15356274 15356484 + 33.2 0.000 Intergenic Intergenic -14999 NM_001018009 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr4-214 chr4 48128143 48128353 + 33.2 0.000 intron (NM_003328, intron 1 of 14) intron (NM_003328, intron 1 of 14) 6002 NM_003328 7294 Hs.479669 NM_003328 ENSG00000074966 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding chr7-252 chr7 5530680 5530890 + 33.2 0.000 promoter-TSS (NM_001101) promoter-TSS (NM_001101) -184 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr5-173 chr5 473868 474078 + 33.2 0.000 intron (NR_125375, intron 1 of 6) CpG-21789 737 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr10-202 chr10 132308220 132308430 + 33.1 0.000 promoter-TSS (NM_173575) promoter-TSS (NM_173575) -375 NM_173575 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr6-219 chr6 37018269 37018479 + 33.1 0.000 intron (NM_173558, intron 9 of 15) intron (NM_173558, intron 9 of 15) 12719 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr5-186 chr5 151686879 151687089 + 33.1 0.000 promoter-TSS (NM_003118) promoter-TSS (NM_003118) -69 NM_003118 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr7-193 chr7 26864665 26864875 + 33.1 0.000 promoter-TSS (NM_003930) promoter-TSS (NM_003930) -180 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr7-233 chr7 2670890 2671100 + 33.1 0.000 Intergenic Intergenic -8527 NM_133463 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr9-284 chr9 95189401 95189611 + 33.1 0.000 intron (NM_001243744, intron 4 of 13) intron (NM_001243744, intron 4 of 13) -103412 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr9-162 chr9 121287013 121287223 + 33.1 0.000 intron (NM_001258030, intron 1 of 16) intron (NM_001258030, intron 1 of 16) 569 NM_001258030 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr19-522 chr19 13731530 13731740 + 33.1 0.000 promoter-TSS (NM_001320561) promoter-TSS (NM_001320561) -117 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr15-147 chr15 36428248 36428458 + 33.1 0.000 Intergenic Intergenic -151273 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr2-752 chr2 134900202 134900412 + 33.1 0.000 intron (NM_001307983, intron 9 of 9) Tigger7|DNA|TcMar-Tigger 18299 NR_036549 100129961 Hs.729028 NR_036549 CCNT2-AS1 - CCNT2 antisense RNA 1 ncRNA chr4-142 chr4 98995316 98995526 + 33.1 0.000 promoter-TSS (NM_015143) promoter-TSS (NM_015143) -300 NM_015143 23173 Hs.480364 NM_015143 ENSG00000164024 METAP1 MAP1A|MetAP1A methionyl aminopeptidase 1 protein-coding chr1-467 chr1 154558870 154559080 + 33.1 0.000 promoter-TSS (NM_017582) promoter-TSS (NM_017582) -313 NM_017582 55585 Hs.607928 NM_017582 ENSG00000160714 UBE2Q1 GTAP|NICE-5|NICE5|PRO3094|UBE2Q ubiquitin conjugating enzyme E2 Q1 protein-coding chr2-305 chr2 238285956 238286166 + 33.1 0.000 intron (NM_022817, intron 1 of 22) intron (NM_022817, intron 1 of 22) 2549 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr1-132 chr1 1692822 1693032 + 33.1 0.000 promoter-TSS (NM_001290264) promoter-TSS (NM_001290264) -132 NM_001110781 728661 Hs.655255 NM_001110781 ENSG00000189339 SLC35E2B SLC35E2 solute carrier family 35 member E2B protein-coding chr2-268 chr2 161030726 161030936 + 33.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -106124 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr19-423 chr19 44356596 44356806 + 33.1 0.000 promoter-TSS (NM_001083335) promoter-TSS (NM_001083335) 3 NM_001348283 7771 Hs.48589 NM_013380 ENSG00000062370 ZNF112 ZFP112|ZNF228 zinc finger protein 112 protein-coding chr17-251 chr17 33235249 33235459 + 33.1 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 57634 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr3-177 chr3 122514704 122514914 + 33.1 0.000 non-coding (NR_026698, exon 1 of 15) non-coding (NR_026698, exon 1 of 15) 130 NR_026698 3836 Hs.161008 NM_002264 ENSG00000114030 KPNA1 IPOA5|NPI-1|RCH2|SRP1 karyopherin subunit alpha 1 protein-coding chr19-508 chr19 47273482 47273692 + 33.1 0.000 promoter-TSS (NR_037675) promoter-TSS (NR_037675) -836 NR_037675 255783 Hs.128690 NM_178511 ENSG00000257704 INAFM1 PRR24 InaF motif containing 1 protein-coding chr5-458 chr5 151093513 151093723 + 33.1 0.000 Intergenic Intergenic -5933 NM_001252390 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr6-274 chr6 126919904 126920114 + 33.1 0.000 Intergenic Intergenic -198662 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr11-247 chr11 6603517 6603727 + 33.1 0.000 promoter-TSS (NM_001278442) promoter-TSS (NM_001278442) -6 NM_015324 23378 Hs.652255 NM_015324 ENSG00000132275 RRP8 KIAA0409|NML ribosomal RNA processing 8 protein-coding chr20-110 chr20 45857333 45857543 + 33.1 0.000 promoter-TSS (NM_080752) promoter-TSS (NM_080752) -46 NM_005469 10005 Hs.444776 NM_005469 ENSG00000101473 ACOT8 HNAACTE|NAP1|PTE-1|PTE-2|PTE1|PTE2|hACTE-III|hTE acyl-CoA thioesterase 8 protein-coding chr13-170 chr13 35772008 35772218 + 33.1 0.000 3' UTR (NM_001330072, exon 17 of 17) 3' UTR (NM_001330072, exon 17 of 17) 74386 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr16-405 chr16 85005577 85005787 + 33.1 0.000 intron (NM_001145548, intron 1 of 8) intron (NM_001145548, intron 1 of 8) 5853 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr2-447 chr2 239222027 239222237 + 33.1 0.000 intron (NM_006037, intron 3 of 26) intron (NM_006037, intron 3 of 26) -26675 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr8-85 chr8 66428745 66428955 + 33.1 0.000 promoter-TSS (NM_015169) promoter-TSS (NM_015169) 127 NR_040434 100505676 Hs.121613 NM_001242759 ENSG00000246145 RRS1-AS1 - RRS1 antisense RNA 1 (head to head) ncRNA chr19-281 chr19 2463105 2463315 + 33.1 0.000 Intergenic L1M3e|LINE|L1 -1025 NR_134931 101928602 Hs.541407 NR_134931 ENSG00000267201 LINC01775 - long intergenic non-protein coding RNA 1775 ncRNA chr5-146 chr5 149002098 149002308 + 33.1 0.000 3' UTR (NM_024577, exon 17 of 17) 3' UTR (NM_024577, exon 17 of 17) 60206 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr14-144 chr14 54773344 54773554 + 33.1 0.000 intron (NM_015589, intron 8 of 11) intron (NM_015589, intron 8 of 11) 18616 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding KI270733.1-3 KI270733.1 153689 153899 + 33.1 0.000 NA NA NA NA chr1-229 chr1 1615479 1615689 + 33.1 0.000 promoter-TSS (NR_033183) promoter-TSS (NR_033183) 84 NR_033183 142678 Hs.135805 NM_080875 ENSG00000197530 MIB2 ZZANK1|ZZZ5 mindbomb E3 ubiquitin protein ligase 2 protein-coding chr7-163 chr7 74587399 74587609 + 33.1 0.000 intron (NM_016328, intron 22 of 26) intron (NM_016328, intron 22 of 26) -8464 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr14-167 chr14 69005827 69006037 + 33.1 0.000 Intergenic Intergenic 26250 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr2-317 chr2 231706895 231707105 + 33.1 0.000 Intergenic CpG -1525 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr11-738 chr11 12704134 12704344 + 33.1 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 29818 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr20-199 chr20 44960321 44960531 + 33.1 0.000 promoter-TSS (NM_006809) promoter-TSS (NM_006809) -29 NM_006809 10953 Hs.517066 NM_006809 ENSG00000025772 TOMM34 HTOM34P|TOM34|URCC3 translocase of outer mitochondrial membrane 34 protein-coding chr2-630 chr2 160836904 160837114 + 33.1 0.000 Intergenic Intergenic -299946 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr5-238 chr5 137954212 137954422 + 33.1 0.000 exon (NM_016603, exon 14 of 23) exon (NM_016603, exon 14 of 23) 64860 NM_001258449 27039 Hs.716884 NM_014386 ENSG00000078795 PKD2L2 TRPP5 polycystin 2 like 2, transient receptor potential cation channel protein-coding chr11-308 chr11 68890078 68890288 + 33.1 0.000 Intergenic Intergenic 13649 NM_181514 219927 Hs.503047 NM_181512 ENSG00000197345 MRPL21 L21mt|MRP-L21 mitochondrial ribosomal protein L21 protein-coding chr15-132 chr15 90098153 90098363 + 33.1 0.000 intron (NM_002168, intron 1 of 10) intron (NM_002168, intron 1 of 10) 2363 NM_001289910 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr14-37 chr14 101760631 101760841 + 33.1 0.000 promoter-TSS (NM_001352913) promoter-TSS (NM_001352913) 163 NM_001352914 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr20-94 chr20 25136769 25136979 + 33.1 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 11119 NR_027093 284798 Hs.334934 NR_027091 ENSG00000230725 LOC284798 - uncharacterized LOC284798 ncRNA chr11-416 chr11 46920888 46921098 + 33.0 0.000 Intergenic Intergenic -2443 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chr15-192 chr15 89101931 89102141 + 33.0 0.000 intron (NM_007011, intron 2 of 14) intron (NM_007011, intron 2 of 14) 13580 NM_152924 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr5-161 chr5 43121261 43121471 + 33.0 0.000 promoter-TSS (NM_001330717) promoter-TSS (NM_001330717) -95 NM_001330711 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr9-257 chr9 127735098 127735308 + 33.0 0.000 promoter-TSS (NM_001252023) promoter-TSS (NM_001252023) 91 NM_001085347 27433 Hs.444106 NM_130459 ENSG00000160404 TOR2A TORP1 torsin family 2 member A protein-coding chr10-275 chr10 132506857 132507067 + 33.0 0.000 Intergenic Intergenic 29961 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr4-295 chr4 121668418 121668628 + 33.0 0.000 exon (NM_001154, exon 13 of 13) exon (NM_001154, exon 13 of 13) 28457 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr14-179 chr14 50846588 50846798 + 33.0 0.000 Intergenic Intergenic -15572 NM_016350 51199 Hs.310429 NM_016350 ENSG00000100503 NIN SCKL7 ninein protein-coding chr17-221 chr17 78925975 78926185 + 33.0 0.000 promoter-TSS (NM_003255) promoter-TSS (NM_003255) -693 NM_003255 7077 Hs.633514 NM_003255 ENSG00000035862 TIMP2 CSC-21K|DDC8 TIMP metallopeptidase inhibitor 2 protein-coding chr4-165 chr4 165112955 165113165 + 33.0 0.000 promoter-TSS (NM_001100389) promoter-TSS (NM_001100389) -200 NM_001100389 201931 Hs.704511 NM_152681 ENSG00000170088 TMEM192 - transmembrane protein 192 protein-coding chr10-101 chr10 43420521 43420731 + 33.0 0.000 Intergenic Intergenic -3186 NR_145740 109616985 NR_145740 ENSG00000221400 SNORD3J - small nucleolar RNA, C/D box 3J snoRNA chr7-346 chr7 101681321 101681531 + 33.0 0.000 Intergenic Intergenic -52130 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr7-392 chr7 100436676 100436886 + 33.0 0.000 promoter-TSS (NM_145030) promoter-TSS (NM_145030) -284 NM_145030 221908 Hs.413359 NM_145030 ENSG00000160813 PPP1R35 C7orf47 protein phosphatase 1 regulatory subunit 35 protein-coding chr9-356 chr9 75448428 75448638 + 33.0 0.000 Intergenic Intergenic 360019 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr22-137 chr22 22297881 22298091 + 33.0 0.000 promoter-TSS (NR_027293) promoter-TSS (NR_027293) -112 NR_027293 96610 Hs.449601 NM_080926 BMS1P20 IGL|IGLV|IGLV1 BMS1 pseudogene 20 pseudo chr3-147 chr3 150763320 150763530 + 33.0 0.000 promoter-TSS (NM_005067) promoter-TSS (NM_005067) -256 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding chr6-109 chr6 13487444 13487654 + 33.0 0.000 promoter-TSS (NM_001242629) promoter-TSS (NM_001242629) 51 NM_018988 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr6-183 chr6 118388376 118388586 + 33.0 0.000 Intergenic MER44B|DNA|TcMar-Tigger -112892 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr4-75 chr4 67545466 67545676 + 33.0 0.000 promoter-TSS (NM_001812) promoter-TSS (NM_001812) -68 NM_001812 1060 Hs.479867 NM_001812 ENSG00000145241 CENPC CENP-C|CENPC1|MIF2|hcp-4 centromere protein C protein-coding chr11-450 chr11 12450443 12450653 + 33.0 0.000 intron (NM_018222, intron 1 of 12) MLT2A2|LTR|ERVL 72977 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr11-370 chr11 66119619 66119829 + 33.0 0.000 intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 49452 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr3-227 chr3 184185833 184186043 + 33.0 0.000 promoter-TSS (NM_001351299) promoter-TSS (NM_001351299) -137 NM_018358 55324 Hs.361323 NM_018358 ENSG00000161204 ABCF3 EST201864 ATP binding cassette subfamily F member 3 protein-coding chr7-165 chr7 97872286 97872496 + 33.0 0.000 promoter-TSS (NM_001178077) promoter-TSS (NM_001178077) 17 NM_001178075 440 Hs.489207 NM_001673 ENSG00000070669 ASNS ASNSD|TS11 asparagine synthetase (glutamine-hydrolyzing) protein-coding chr21-34 chr21 44869919 44870129 + 33.0 0.000 intron (NM_001286822, intron 1 of 2) intron (NM_001286822, intron 1 of 2) 3666 NM_004339 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF PTTG1 interacting protein protein-coding chr12-295 chr12 63045417 63045627 + 33.0 0.000 Intergenic Intergenic 107288 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr5-359 chr5 108193444 108193654 + 33.0 0.000 intron (NM_001163315, intron 5 of 8) intron (NM_001163315, intron 5 of 8) 188549 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr12-297 chr12 79897687 79897897 + 33.0 0.000 intron (NM_001244990, intron 2 of 24) intron (NM_001244990, intron 2 of 24) 16119 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr18-36 chr18 7038478 7038688 + 33.0 0.000 intron (NM_005559, intron 11 of 62) intron (NM_005559, intron 11 of 62) 79214 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr14-54 chr14 105021233 105021443 + 33.0 0.000 promoter-TSS (NM_145701) promoter-TSS (NM_145701) -255 NM_145701 55038 Hs.34045 NM_017955 ENSG00000170779 CDCA4 HEPP|SEI-3/HEPP cell division cycle associated 4 protein-coding chr14-74 chr14 50312290 50312500 + 33.0 0.000 promoter-TSS (NM_015684) promoter-TSS (NM_015684) 71 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr14-137 chr14 22919278 22919488 + 33.0 0.000 promoter-TSS (NR_120599) promoter-TSS (NR_120599) -73 NR_120599 100505758 Hs.655707 NR_120599 ENSG00000237054 PRMT5-AS1 - PRMT5 antisense RNA 1 ncRNA chr16-179 chr16 2156522 2156732 + 33.0 0.000 intron (NM_032271, intron 1 of 20) L2b|LINE|L2 845 NM_032271 84231 Hs.713632 NM_032271 ENSG00000131653 TRAF7 CAFDADD|RFWD1|RNF119 TNF receptor associated factor 7 protein-coding chr2-217 chr2 148020784 148020994 + 33.0 0.000 promoter-TSS (NM_001190882) promoter-TSS (NM_001190882) -122 NM_018328 55777 Hs.458312 NM_018328 ENSG00000204406 MBD5 MRD1 methyl-CpG binding domain protein 5 protein-coding chr9-102 chr9 136267311 136267521 + 33.0 0.000 Intergenic CpG -21575 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr5-107 chr5 176448096 176448306 + 33.0 0.000 promoter-TSS (NM_014613) promoter-TSS (NM_014613) -184 NM_014613 23197 Hs.484242 NM_014613 ENSG00000113194 FAF2 ETEA|UBXD8|UBXN3B Fas associated factor family member 2 protein-coding chr1-1039 chr1 29196972 29197182 + 32.9 0.000 intron (NM_001349715, intron 8 of 10) intron (NM_001349715, intron 8 of 10) -15177 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding chr8-139 chr8 120070097 120070307 + 32.9 0.000 Intergenic Intergenic -54900 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr16-348 chr16 87682153 87682363 + 32.9 0.000 intron (NM_020655, intron 2 of 4) Charlie22a|DNA|hAT-Charlie 79750 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr6-282 chr6 33840118 33840328 + 32.9 0.000 Intergenic Intergenic -36220 NM_001040109 4295 Hs.2813 NM_002418 ENSG00000096395 MLN - motilin protein-coding chr2-599 chr2 25103322 25103532 + 32.9 0.000 intron (NM_014971, intron 3 of 22) MIR3|SINE|MIR 60964 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr10-268 chr10 14362179 14362389 + 32.9 0.000 Intergenic Intergenic 20993 NR_036181 100422843 NR_036181 ENSG00000266321 MIR4293 - microRNA 4293 ncRNA chr4-218 chr4 48173526 48173736 + 32.9 0.000 intron (NM_003215, intron 3 of 17) intron (NM_003215, intron 3 of 17) -39381 NM_003328 7294 Hs.479669 NM_003328 ENSG00000074966 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding chr13-292 chr13 64723860 64724070 + 32.9 0.000 Intergenic Intergenic -647954 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr1-1109 chr1 213327351 213327561 + 32.9 0.000 Intergenic Intergenic 276215 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr10-352 chr10 77164072 77164282 + 32.9 0.000 intron (NM_001271519, intron 5 of 28) intron (NM_001271519, intron 5 of 28) 23346 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr12-392 chr12 84738693 84738903 + 32.9 0.000 Intergenic LTR16A2|LTR|ERVL 174001 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr17-299 chr17 65231735 65231945 + 32.9 0.000 Intergenic Intergenic 94470 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr3-118 chr3 33097091 33097301 + 32.9 0.000 promoter-TSS (NM_001317040) promoter-TSS (NM_001317040) 34 NM_001317040 2720 Hs.443031 NM_000404 ENSG00000170266 GLB1 EBP|ELNR1|MPS4B galactosidase beta 1 protein-coding chr19-414 chr19 37217977 37218187 + 32.9 0.000 promoter-TSS (NM_001345947) promoter-TSS (NM_001345947) -132 NM_001345948 163087 Hs.590975 NM_152604 ENSG00000188283 ZNF383 HSD17 zinc finger protein 383 protein-coding chr1-357 chr1 165698618 165698828 + 32.9 0.000 promoter-TSS (NR_036683) promoter-TSS (NR_036683) -27 NR_036683 440700 Hs.568703 NR_036683 ENSG00000215838 LOC440700 - carbonic anhydrase 14 pseudogene pseudo chr8-90 chr8 94475077 94475287 + 32.9 0.000 promoter-TSS (NM_001205262) promoter-TSS (NM_001205262) -67 NM_001205262 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr17-283 chr17 30600183 30600393 + 32.9 0.000 intron (NR_015341, intron 2 of 8) CpG 23823 NR_015341 107133515 Hs.568209 NR_015341 SMURF2P1-LRRC37BP1 - SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene pseudo chr19-503 chr19 16339001 16339211 + 32.9 0.000 Intergenic Intergenic 14280 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr22-203 chr22 37905216 37905426 + 32.9 0.000 promoter-TSS (NM_033386) promoter-TSS (NM_033386) -976 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr15-87 chr15 68054224 68054434 + 32.9 0.000 promoter-TSS (NM_001320687) promoter-TSS (NM_001320687) 150 NM_016166 8554 Hs.162458 NM_016166 ENSG00000033800 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT 1 protein-coding chr14-170 chr14 34497074 34497284 + 32.9 0.000 Intergenic Intergenic -34939 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr19-520 chr19 751605 751815 + 32.9 0.000 intron (NR_135168, intron 1 of 3) (GGCTGG)n|Simple_repeat|Simple_repeat 598 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr13-53 chr13 23889309 23889519 + 32.9 0.000 promoter-TSS (NM_001135816) promoter-TSS (NM_001135816) -14 NM_005932 4285 Hs.507498 NM_005932 ENSG00000027001 MIPEP COXPD31|HMIP|MIP mitochondrial intermediate peptidase protein-coding chr12-360 chr12 106309777 106309987 + 32.9 0.000 intron (NM_152772, intron 1 of 9) intron (NM_152772, intron 1 of 9) 7149 NM_001286262 255394 Hs.696047 NM_152772 ENSG00000166046 TCP11L2 - t-complex 11 like 2 protein-coding chr9-166 chr9 129777268 129777478 + 32.9 0.000 Intergenic Intergenic -24331 NM_004878 9536 Hs.146688 NM_004878 ENSG00000148344 PTGES MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1 prostaglandin E synthase protein-coding chr11-387 chr11 65182487 65182697 + 32.9 0.000 promoter-TSS (NR_145677) promoter-TSS (NR_145677) 664 NM_005186 823 Hs.502842 NM_005186 ENSG00000014216 CAPN1 CANP|CANP1|CANPL1|SPG76|muCANP|muCL calpain 1 protein-coding chr10-144 chr10 102421077 102421287 + 32.9 0.000 exon (NM_024326, exon 1 of 4) exon (NM_024326, exon 1 of 4) -1248 NM_001270965 5662 Hs.154658 NM_002779 ENSG00000059915 PSD EFA6|EFA6A|PSD1|TYL pleckstrin and Sec7 domain containing protein-coding chr17-358 chr17 50064774 50064984 + 32.9 0.000 intron (NM_002204, intron 3 of 25) intron (NM_002204, intron 3 of 25) 8769 NM_002204 3675 Hs.265829 NM_002204 ENSG00000005884 ITGA3 CD49C|FRP-2|GAP-B3|GAPB3|ILNEB|MSK18|VCA-2|VL3A|VLA3a integrin subunit alpha 3 protein-coding chr12-56 chr12 131949757 131949967 + 32.9 0.000 promoter-TSS (NM_015409) promoter-TSS (NM_015409) -80 NM_015409 57634 Hs.723478 NM_015409 ENSG00000183495 EP400 CAGH32|P400|TNRC12 E1A binding protein p400 protein-coding chr1-521 chr1 50968314 50968524 + 32.9 0.000 promoter-TSS (NM_001262) promoter-TSS (NM_001262) -276 NM_001262 1031 Hs.525324 NM_001262 ENSG00000123080 CDKN2C INK4C|p18|p18-INK4C cyclin dependent kinase inhibitor 2C protein-coding chr16-245 chr16 68142371 68142581 + 32.9 0.000 intron (NM_004555, intron 3 of 10) AluSx1|SINE|Alu 57106 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr13-54 chr13 113545709 113545919 + 32.9 0.000 intron (NR_146221, intron 9 of 10) intron (NR_146221, intron 9 of 10) -38874 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr17-458 chr17 47294370 47294580 + 32.9 0.000 intron (NM_000212, intron 10 of 14) intron (NM_000212, intron 10 of 14) 29138 NR_110881 102724508 Hs.661005 NR_110880 ENSG00000263293 THCAT158 - thyroid cancer-associated transcript 158 ncRNA chr5-333 chr5 149212240 149212450 + 32.9 0.000 intron (NM_001370418, intron 6 of 18) intron (NM_001370418, intron 6 of 18) -59493 NM_001323063 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr8-29 chr8 124372548 124372758 + 32.9 0.000 promoter-TSS (NM_194291) promoter-TSS (NM_194291) 46 NM_194291 157378 Hs.100691 NM_194291 ENSG00000164983 TMEM65 - transmembrane protein 65 protein-coding chr19-395 chr19 35775321 35775531 + 32.9 0.000 promoter-TSS (NM_052948) promoter-TSS (NM_052948) -138 NM_052948 115703 Hs.515364 NM_052948 ENSG00000004777 ARHGAP33 NOMA-GAP|SNX26|TCGAP Rho GTPase activating protein 33 protein-coding chr14-142 chr14 94600894 94601104 + 32.9 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -11392 NM_001085 12 Hs.534293 NM_001085 ENSG00000196136 SERPINA3 AACT|ACT|GIG24|GIG25 serpin family A member 3 protein-coding chr12-199 chr12 56258461 56258671 + 32.9 0.000 promoter-TSS (NM_173595) promoter-TSS (NM_173595) -182 NM_173595 283373 Hs.524506 NM_173595 ENSG00000139645 ANKRD52 ANKRD33 ankyrin repeat domain 52 protein-coding chr5-281 chr5 103120174 103120384 + 32.9 0.000 promoter-TSS (NM_001345876) promoter-TSS (NM_001345876) -22 NM_001345877 23262 Hs.212046 NM_015216 ENSG00000145725 PPIP5K2 CFAP160|DFNB100|HISPPD1|IP7K2|VIP2 diphosphoinositol pentakisphosphate kinase 2 protein-coding chr19-318 chr19 57320319 57320529 + 32.9 0.000 promoter-TSS (NM_213598) promoter-TSS (NM_213598) -48 NM_213598 125919 Hs.202544 NM_213598 ENSG00000178229 ZNF543 - zinc finger protein 543 protein-coding chr12-173 chr12 67268763 67268973 + 32.9 0.000 promoter-TSS (NM_001329675) promoter-TSS (NM_001329675) -490 NM_018448 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr17-307 chr17 29158724 29158934 + 32.8 0.000 intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) 17944 NM_001346767 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr8-91 chr8 102745486 102745696 + 32.8 0.000 Intergenic Intergenic -61231 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr8-135 chr8 60951038 60951248 + 32.8 0.000 Intergenic Intergenic 16605 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr2-670 chr2 201151202 201151412 + 32.8 0.000 intron (NR_040030, intron 2 of 6) intron (NR_040030, intron 2 of 6) 6485 NR_040030 65072 Hs.664613 NR_040030 ENSG00000226312 CFLAR-AS1 ALS2CR10 CFLAR antisense RNA 1 ncRNA chr1-677 chr1 145892078 145892288 + 32.8 0.000 3' UTR (NM_001303041, exon 26 of 26) 3' UTR (NM_001303041, exon 26 of 26) -6317 NM_144698 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 - ankyrin repeat domain 35 protein-coding chr2-357 chr2 38778028 38778238 + 32.8 0.000 promoter-TSS (NM_024775) promoter-TSS (NM_024775) -77 NM_024775 79833 Hs.143818 NM_024775 ENSG00000152147 GEMIN6 - gem nuclear organelle associated protein 6 protein-coding chr19-432 chr19 45769362 45769572 + 32.8 0.000 promoter-TSS (NM_175875) promoter-TSS (NM_175875) -215 NM_175875 147912 Hs.43314 NM_175875 ENSG00000177045 SIX5 BOR2|DMAHP SIX homeobox 5 protein-coding chr13-106 chr13 46679805 46680015 + 32.8 0.000 intron (NM_001164213, intron 3 of 18) intron (NM_001164213, intron 3 of 18) 117251 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr19-222 chr19 16324434 16324644 + 32.8 0.000 promoter-TSS (NM_016270) promoter-TSS (NM_016270) -287 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr7-282 chr7 80145910 80146120 + 32.8 0.000 intron (NM_001256414, intron 1 of 7) intron (NM_001256414, intron 1 of 7) 10231 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr19-443 chr19 12052880 12053090 + 32.8 0.000 promoter-TSS (NM_001080404) promoter-TSS (NM_001080404) -24 NM_001080404 729747 Hs.704229 NM_001080404 ENSG00000257446 ZNF878 - zinc finger protein 878 protein-coding chr17-801 chr17 66255140 66255350 + 32.8 0.000 Intergenic Intergenic -25830 NM_000042 350 Hs.445358 NM_000042 ENSG00000091583 APOH B2G1|B2GP1|BG apolipoprotein H protein-coding chr3-156 chr3 49007304 49007514 + 32.8 0.000 promoter-TSS (NM_018031) promoter-TSS (NM_018031) 18 NM_001320546 11180 Hs.654815 NM_018031 ENSG00000178252 WDR6 - WD repeat domain 6 protein-coding chr1-440 chr1 1265050 1265260 + 32.8 0.000 intron (NM_194315, intron 2 of 7) intron (NM_194315, intron 2 of 7) 8699 NM_194315 118424 Hs.191987 NM_058167 ENSG00000160087 UBE2J2 NCUBE-2|NCUBE2|PRO2121 ubiquitin conjugating enzyme E2 J2 protein-coding chr19-360 chr19 1876156 1876366 + 32.8 0.000 TTS (NM_001130111) TTS (NM_001130111) 9235 NM_031213 81926 Hs.465542 NM_031213 ENSG00000129968 ABHD17A C19orf27|FAM108A1 abhydrolase domain containing 17A protein-coding chr20-257 chr20 10849164 10849374 + 32.8 0.000 Intergenic Intergenic 60003 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA chr2-517 chr2 150644387 150644597 + 32.8 0.000 Intergenic OldhAT1|DNA|hAT-Ac 15595 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr21-101 chr21 42040586 42040796 + 32.8 0.000 Intergenic Intergenic 18422 NR_027273 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA chr1-373 chr1 110963838 110964048 + 32.8 0.000 promoter-TSS (NM_001006945) promoter-TSS (NM_001006945) 1 NM_001006945 55791 Hs.25245 NM_018372 ENSG00000121931 LRIF1 C1orf103|HBiX1|RIF1 ligand dependent nuclear receptor interacting factor 1 protein-coding chr8-63 chr8 22673287 22673497 + 32.8 0.000 Intergenic Intergenic -4244 NR_156436 55909 Hs.433722 NM_018688 ENSG00000147439 BIN3 - bridging integrator 3 protein-coding chr16-478 chr16 66580757 66580967 + 32.8 0.000 intron (NM_144673, intron 2 of 3) intron (NM_144673, intron 2 of 3) 1399 NM_144673 146225 Hs.195685 NM_144673 ENSG00000140932 CMTM2 CKLFSF2 CKLF like MARVEL transmembrane domain containing 2 protein-coding chr6-165 chr6 26473986 26474196 + 32.8 0.000 intron (NR_038992, intron 3 of 3) intron (NR_038992, intron 3 of 3) 8418 NR_038992 285819 Hs.575357 NR_038992 LOC285819 - uncharacterized LOC285819 ncRNA chr5-297 chr5 98929545 98929755 + 32.8 0.000 promoter-TSS (NR_157078) promoter-TSS (NR_157078) 64 NR_157079 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr7-413 chr7 100725861 100726071 + 32.8 0.000 Intergenic MIRc|SINE|MIR 5498 NM_000799 2056 Hs.2303 NM_000799 ENSG00000130427 EPO DBAL|ECYT5|EP|MVCD2 erythropoietin protein-coding chr2-908 chr2 174632931 174633141 + 32.8 0.000 intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) 1569 NM_003387 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr15-191 chr15 84912125 84912335 + 32.8 0.000 intron (NM_001287761, intron 8 of 14) intron (NM_001287761, intron 8 of 14) 27568 NM_001287762 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr7-390 chr7 21945944 21946154 + 32.8 0.000 promoter-TSS (NM_018719) promoter-TSS (NM_018719) -150 NM_001127370 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr2-142 chr2 9423387 9423597 + 32.8 0.000 promoter-TSS (NM_001321834) promoter-TSS (NM_001321834) 36 NR_134955 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr6-247 chr6 158031451 158031661 + 32.8 0.000 intron (NM_003898, intron 3 of 26) intron (NM_003898, intron 3 of 26) 14463 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr17-305 chr17 18070975 18071185 + 32.8 0.000 Intergenic MER5B|DNA|hAT-Charlie -16868 NM_001330144 1819 Hs.78582 NM_001388 ENSG00000108591 DRG2 - developmentally regulated GTP binding protein 2 protein-coding chr1-438 chr1 247007887 247008097 + 32.8 0.000 promoter-TSS (NM_020394) promoter-TSS (NM_020394) 65 NM_020394 57116 Hs.669893 NM_020394 ENSG00000197472 ZNF695 SBZF3 zinc finger protein 695 protein-coding chr3-271 chr3 129305809 129306019 + 32.8 0.000 TTS (NM_001363881) TTS (NM_001363881) -10357 NR_026991 339942 Hs.450096 NM_001025468 H1FX-AS1 C3orf47 H1FX antisense RNA 1 ncRNA chr19-700 chr19 42217950 42218160 + 32.8 0.000 promoter-TSS (NR_073052) promoter-TSS (NR_073052) -378 NR_073048 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr19-603 chr19 46760115 46760325 + 32.6 0.000 Intergenic MER20B|DNA|hAT-Charlie -13770 NM_001039877 29888 Hs.631590 NM_013403 ENSG00000090372 STRN4 PPP2R6C|ZIN|zinedin striatin 4 protein-coding chr22-191 chr22 40683146 40683356 + 32.6 0.000 TTS (NM_005297) TTS (NM_005297) 4073 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr1-572 chr1 201461267 201461477 + 32.6 0.000 Intergenic L2c|LINE|L2 7799 NR_073080 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr5-323 chr5 73031004 73031214 + 32.6 0.000 intron (NM_001146032, intron 7 of 24) intron (NM_001146032, intron 7 of 24) 75068 NM_001146032 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr1-1159 chr1 53146300 53146510 + 32.6 0.000 Intergenic Intergenic -3767 NM_001287596 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr9-184 chr9 137436106 137436316 + 32.6 0.000 exon (NM_001033113, exon 7 of 10) exon (NM_001033113, exon 7 of 10) 5146 NM_198585 377841 Hs.512562 NM_198585 ENSG00000188833 ENTPD8 E-NTPDase|GLSR2492|NTPDase-8|UNQ2492 ectonucleoside triphosphate diphosphohydrolase 8 protein-coding chr15-98 chr15 64851552 64851762 + 32.6 0.000 intron (NM_025201, intron 2 of 5) intron (NM_025201, intron 2 of 5) 9742 NM_025201 80301 Hs.709337 NM_025201 ENSG00000241839 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing O2 protein-coding chr14-192 chr14 103594396 103594606 + 32.6 0.000 Intergenic Intergenic 31541 NM_001302654 84334 Hs.598441 NM_001302652 ENSG00000256053 COA8 APOP|APOP1|APOPT1|C14orf153 cytochrome c oxidase assembly factor 8 protein-coding chr10-213 chr10 97334777 97334987 + 32.6 0.000 promoter-TSS (NM_012083) promoter-TSS (NM_012083) -153 NM_012083 23401 Hs.140720 NM_012083 ENSG00000181274 FRAT2 FRAT-2 FRAT regulator of WNT signaling pathway 2 protein-coding chr12-107 chr12 124423248 124423458 + 32.6 0.000 intron (NM_001077261, intron 13 of 47) intron (NM_001077261, intron 13 of 47) -86111 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr15-89 chr15 40266956 40267166 + 32.6 0.000 intron (NM_001128629, intron 4 of 9) intron (NM_001128629, intron 4 of 9) 13883 NM_001276717 56924 Hs.732375 NM_020168 ENSG00000137843 PAK6 PAK5 p21 (RAC1) activated kinase 6 protein-coding chr8-203 chr8 42196238 42196448 + 32.6 0.000 intron (NM_001319189, intron 1 of 11) intron (NM_001319189, intron 1 of 11) 11222 NM_000930 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr16-198 chr16 89686636 89686846 + 32.6 0.000 promoter-TSS (NM_001160367) promoter-TSS (NM_001160367) 52 NR_027702 8558 Hs.699177 NM_003674 ENSG00000185324 CDK10 ALSAS|PISSLRE cyclin dependent kinase 10 protein-coding chr12-160 chr12 47820775 47820985 + 32.6 0.000 promoter-TSS (NM_001368046) promoter-TSS (NM_001368046) -977 NM_001098416 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr19-401 chr19 11766867 11767077 + 32.6 0.000 promoter-TSS (NM_152355) promoter-TSS (NM_152355) -28 NM_152355 126068 Hs.675132 NM_152355 ENSG00000197044 ZNF441 - zinc finger protein 441 protein-coding chr5-217 chr5 96935857 96936067 + 32.6 0.000 promoter-TSS (NM_005575) promoter-TSS (NM_005575) -118 NM_005575 4012 Hs.527199 NM_005575 ENSG00000113441 LNPEP CAP|IRAP|P-LAP|PLAP leucyl and cystinyl aminopeptidase protein-coding chr2-414 chr2 172209029 172209239 + 32.6 0.000 Intergenic Intergenic 106128 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr16-286 chr16 85004498 85004708 + 32.6 0.000 intron (NM_001145548, intron 1 of 8) L2c|LINE|L2 6932 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr17-245 chr17 82494580 82494790 + 32.6 0.000 Intergenic Intergenic -25047 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr7-330 chr7 106009862 106010072 + 32.6 0.000 intron (NM_152750, intron 8 of 18) intron (NM_152750, intron 8 of 18) 46703 NM_001301161 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr5-106 chr5 138449948 138450158 + 32.6 0.000 Intergenic Intergenic 10996 NR_073449 51308 Hs.416090 NM_016606 ENSG00000132563 REEP2 C5orf19|SGC32445|SPG72|Yip2d receptor accessory protein 2 protein-coding chr10-389 chr10 68600449 68600659 + 32.6 0.000 intron (NM_030625, intron 2 of 11) intron (NM_030625, intron 2 of 11) 40217 NM_030625 80312 Hs.258855 NM_030625 ENSG00000138336 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding chr1-351 chr1 27557407 27557617 + 32.6 0.000 intron (NM_001029882, intron 3 of 6) intron (NM_001029882, intron 3 of 6) 45982 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr1-502 chr1 212035536 212035746 + 32.6 0.000 promoter-TSS (NM_001199809) promoter-TSS (NM_001199809) 19 NR_037667 25896 Hs.369285 NM_015434 ENSG00000143493 INTS7 C1orf73|INT7 integrator complex subunit 7 protein-coding chr12-384 chr12 6532611 6532821 + 32.6 0.000 TTS (NM_014865) TTS (NM_014865) -1801 NM_001289746 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding chr16-316 chr16 23905118 23905328 + 32.6 0.000 intron (NM_002738, intron 2 of 16) intron (NM_002738, intron 2 of 16) 69240 NM_002738 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr5-242 chr5 10250239 10250449 + 32.6 0.000 promoter-TSS (NM_001258388) promoter-TSS (NM_001258388) 64 NM_012073 22948 Hs.1600 NM_012073 ENSG00000150753 CCT5 CCT-epsilon|CCTE|HEL-S-69|PNAS-102|TCP-1-epsilon chaperonin containing TCP1 subunit 5 protein-coding chr17-296 chr17 40021504 40021714 + 32.6 0.000 intron (NR_052017, intron 22 of 24) intron (NR_052017, intron 22 of 24) 4800 NR_106944 102466757 NR_106944 ENSG00000283721 MIR6884 hsa-mir-6884 microRNA 6884 ncRNA chr9-670 chr9 111094671 111094881 + 32.6 0.000 Intergenic Intergenic -55778 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr3-386 chr3 14266370 14266580 + 32.6 0.000 Intergenic Intergenic 86093 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA chr10-165 chr10 25016475 25016685 + 32.6 0.000 promoter-TSS (NR_072992) promoter-TSS (NR_072992) -32 NM_024838 79896 Hs.645274 NM_024838 ENSG00000185875 THNSL1 TSH1 threonine synthase like 1 protein-coding chr19-473 chr19 2295082 2295292 + 32.6 0.000 intron (NM_001101391, intron 1 of 1) MLT1C|LTR|ERVL-MaLR 12967 NM_001101391 645191 NM_001101391 ENSG00000220008 LINGO3 LERN2|LRRN6B leucine rich repeat and Ig domain containing 3 protein-coding chr6-245 chr6 151917041 151917251 + 32.6 0.000 intron (NM_001122741, intron 4 of 8) intron (NM_001122741, intron 4 of 8) 108039 NM_001328100 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr6-98 chr6 149566059 149566269 + 32.6 0.000 promoter-TSS (NM_138785) promoter-TSS (NM_138785) -211 NM_138785 116254 Hs.438872 NM_138785 ENSG00000055211 GINM1 C6orf72 glycoprotein integral membrane 1 protein-coding chr8-31 chr8 109539515 109539725 + 32.6 0.000 promoter-TSS (NM_004215) promoter-TSS (NM_004215) -80 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding chr10-312 chr10 32961953 32962163 + 32.6 0.000 Intergenic Intergenic -3828 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr2-419 chr2 231714371 231714581 + 32.6 0.000 TTS (NM_002823) TTS (NM_002823) 1162 NR_036052 100302285 NR_036052 ENSG00000284378 MIR1244-1 MIR1244|MIRN1244|hsa-mir-1244|hsa-mir-1244-1 microRNA 1244-1 ncRNA chr21-99 chr21 37413029 37413239 + 32.6 0.000 intron (NM_101395, intron 2 of 12) intron (NM_101395, intron 2 of 12) -5771 NM_130436 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr12-145 chr12 6493877 6494087 + 32.6 0.000 promoter-TSS (NM_016497) promoter-TSS (NM_016497) -120 NM_014865 9918 Hs.5719 NM_014865 ENSG00000010292 NCAPD2 CAP-D2|CNAP1|MCPH21|hCAP-D2 non-SMC condensin I complex subunit D2 protein-coding chr6-177 chr6 135497565 135497775 + 32.6 0.000 promoter-TSS (NM_001134831) promoter-TSS (NM_001134831) 70 NM_001134831 54806 Hs.386684 NM_017651 ENSG00000135541 AHI1 AHI-1|JBTS3|ORF1|dJ71N10.1 Abelson helper integration site 1 protein-coding chr2-404 chr2 10120352 10120562 + 32.6 0.000 Intergenic CpG -2111 NM_001165931 6241 Hs.226390 NM_001034 ENSG00000171848 RRM2 R2|RR2|RR2M ribonucleotide reductase regulatory subunit M2 protein-coding chr3-166 chr3 97821706 97821916 + 32.6 0.000 promoter-TSS (NM_153605) promoter-TSS (NM_153605) -200 NM_153605 131544 Hs.733378 NM_153605 ENSG00000080200 CRYBG3 DKFZp667G2110|vlAKAP crystallin beta-gamma domain containing 3 protein-coding chr9-202 chr9 134327099 134327309 + 32.6 0.000 intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) 749 NM_002957 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr16-255 chr16 85554176 85554386 + 32.6 0.000 Intergenic CpG -57128 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr2-381 chr2 9675613 9675823 + 32.6 0.000 Intergenic Intergenic -44721 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr11-426 chr11 46050234 46050444 + 32.5 0.000 intron (NR_147890, intron 5 of 18) intron (NR_147890, intron 5 of 18) 70480 NM_001352029 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr5-260 chr5 37005380 37005590 + 32.5 0.000 intron (NM_015384, intron 16 of 45) intron (NM_015384, intron 16 of 45) 128716 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr13-123 chr13 113928759 113928969 + 32.5 0.000 non-coding (NR_047495, exon 1 of 1) non-coding (NR_047495, exon 1 of 1) 127 NR_047495 100861555 Hs.353773 NR_047495 ENSG00000260910 LINC00565 - long intergenic non-protein coding RNA 565 ncRNA chr17-220 chr17 77421301 77421511 + 32.5 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) 16329 NM_001293696 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr6-63 chr6 135054747 135054957 + 32.5 0.000 promoter-TSS (NM_001363686) promoter-TSS (NM_001363686) -30 NM_001145158 10767 Hs.378532 NM_006620 ENSG00000112339 HBS1L EF-1a|ERFS|HBS1|HSPC276|eRF3c HBS1 like translational GTPase protein-coding chr19-297 chr19 1104527 1104737 + 32.5 0.000 promoter-TSS (NM_001039848) promoter-TSS (NM_001039848) -18 NM_001039848 2879 Hs.433951 NM_002085 ENSG00000167468 GPX4 GPx-4|GSHPx-4|MCSP|PHGPx|SMDS|snGPx|snPHGPx glutathione peroxidase 4 protein-coding chr12-282 chr12 50187200 50187410 + 32.5 0.000 intron (NM_001243775, intron 3 of 4) intron (NM_001243775, intron 3 of 4) 14228 NM_001243775 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr8-45 chr8 56211564 56211774 + 32.5 0.000 promoter-TSS (NM_001114635) promoter-TSS (NM_001114635) 31 NM_001011669 79145 Hs.436913 NM_024300 ENSG00000170791 CHCHD7 COX23 coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding chr15-75 chr15 74843185 74843395 + 32.5 0.000 promoter-TSS (NR_104308) promoter-TSS (NR_104308) -134 NR_104309 25989 Hs.513034 NM_001099436 ENSG00000140474 ULK3 - unc-51 like kinase 3 protein-coding chr1-442 chr1 3504269 3504479 + 32.5 0.000 intron (NM_001409, intron 17 of 36) intron (NM_001409, intron 17 of 36) 49709 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr13-19 chr13 19958607 19958817 + 32.5 0.000 promoter-TSS (NM_001353161) promoter-TSS (NM_001353161) -13 NM_001353165 7750 Hs.507433 NM_003453 ENSG00000121741 ZMYM2 FIM|MYM|RAMP|SCLL|ZNF198 zinc finger MYM-type containing 2 protein-coding chr4-299 chr4 13477079 13477289 + 32.5 0.000 intron (NM_001017979, intron 2 of 6) intron (NM_001017979, intron 2 of 6) 7156 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr20-53 chr20 62875553 62875763 + 32.5 0.000 Intergenic Intergenic 7245 NR_145839 109623463 NR_145839 SNORA117 - small nucleolar RNA, H/ACA box 117 snoRNA chr4-261 chr4 145920357 145920567 + 32.5 0.000 intron (NM_178835, intron 1 of 14) intron (NM_178835, intron 1 of 14) 18361 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr17-239 chr17 29132036 29132246 + 32.5 0.000 intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) 8248 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr2-838 chr2 200405920 200406130 + 32.5 0.000 intron (NM_001100423, intron 3 of 12) intron (NM_001100423, intron 3 of 12) 97075 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr1-328 chr1 16206689 16206899 + 32.5 0.000 intron (NM_153213, intron 6 of 15) CpG 5858 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr5-141 chr5 163505484 163505694 + 32.5 0.000 promoter-TSS (NM_013283) promoter-TSS (NM_013283) -30 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr5-447 chr5 27242025 27242235 + 32.5 0.000 Intergenic L1PA16|LINE|L1 -203544 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr12-338 chr12 132003886 132004096 + 32.5 0.000 intron (NM_015409, intron 12 of 52) intron (NM_015409, intron 12 of 52) -27233 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr7-378 chr7 42973071 42973281 + 32.5 0.000 Intergenic Intergenic 40800 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr10-310 chr10 13707557 13707767 + 32.5 0.000 promoter-TSS (NM_001318338) promoter-TSS (NM_001318338) -95 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr20-68 chr20 17569839 17570049 + 32.5 0.000 promoter-TSS (NM_001278608) promoter-TSS (NM_001278608) -131 NM_001011546 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr5-303 chr5 34686854 34687064 + 32.5 0.000 promoter-TSS (NM_001145523) promoter-TSS (NM_001145523) -600 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr6-82 chr6 133953077 133953287 + 32.5 0.000 promoter-TSS (NM_004865) promoter-TSS (NM_004865) -42 NM_004865 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr20-119 chr20 45881032 45881242 + 32.5 0.000 promoter-TSS (NM_080603) promoter-TSS (NM_080603) -90 NM_080603 90204 Hs.517075 NM_080603 ENSG00000168612 ZSWIM1 C20orf162 zinc finger SWIM-type containing 1 protein-coding chr2-325 chr2 200963546 200963756 + 32.5 0.000 promoter-TSS (NM_006190) promoter-TSS (NM_006190) 9 NM_006190 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr1-443 chr1 32062500 32062710 + 32.5 0.000 Intergenic Intergenic -9426 NM_001319677 55116 Hs.25544 NM_018056 ENSG00000121775 TMEM39B - transmembrane protein 39B protein-coding chr2-444 chr2 200757049 200757259 + 32.5 0.000 intron (NR_135012, intron 17 of 30) intron (NR_135012, intron 17 of 30) -21977 NR_037886 100507140 Hs.382116 NR_037886 ENSG00000237166 LINC01792 - long intergenic non-protein coding RNA 1792 ncRNA chr22-234 chr22 50507450 50507660 + 32.5 0.000 promoter-TSS (NM_014551) promoter-TSS (NM_014551) 147 NM_001363816 91289 Hs.150540 NM_033200 ENSG00000100258 LMF2 TMEM112B|TMEM153 lipase maturation factor 2 protein-coding chr1-222 chr1 18913226 18913436 + 32.5 0.000 intron (NM_001136265, intron 5 of 8) intron (NM_001136265, intron 5 of 8) -10532 NM_001319218 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chr5-153 chr5 172733741 172733951 + 32.5 0.000 Intergenic Intergenic -21657 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr3-332 chr3 43379409 43379619 + 32.5 0.000 intron (NM_001204831, intron 11 of 12) L1PB1|LINE|L1 -27552 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chr19-261 chr19 13118025 13118235 + 32.5 0.000 promoter-TSS (NM_052876) promoter-TSS (NM_052876) -134 NM_052876 112939 Hs.531614 NM_052876 ENSG00000160877 NACC1 BEND8|BTBD14B|BTBD30|NAC-1|NAC1|NECFM nucleus accumbens associated 1 protein-coding chr16-376 chr16 56742767 56742977 + 32.5 0.000 intron (NM_014669, intron 1 of 21) intron (NM_014669, intron 1 of 21) 12743 NM_014669 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr7-368 chr7 87152165 87152375 + 32.4 0.000 promoter-TSS (NM_001142327) promoter-TSS (NM_001142327) 47 NR_136252 101927420 Hs.633960 NR_136252 ENSG00000224046 LOC101927420 - uncharacterized LOC101927420 ncRNA chr17-410 chr17 31052487 31052697 + 32.4 0.000 intron (NR_146737, intron 2 of 6) intron (NR_146737, intron 2 of 6) 6517 NR_146737 646030 NR_146737 LOC646030 - leucine rich repeat containing 37B pseudogene pseudo chr1-472 chr1 1919280 1919490 + 32.4 0.000 promoter-TSS (NM_178545) promoter-TSS (NM_178545) -106 NM_178545 339456 Hs.123423 NM_178545 ENSG00000178821 TMEM52 - transmembrane protein 52 protein-coding chr12-432 chr12 105369094 105369304 + 32.4 0.000 intron (NM_001145199, intron 5 of 5) intron (NM_001145199, intron 5 of 5) 38508 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr11-465 chr11 72070003 72070213 + 32.4 0.000 intron (NM_001286561, intron 1 of 26) intron (NM_001286561, intron 1 of 26) 2194 NR_036123 100422953 NR_036123 ENSG00000263742 MIR3165 mir-3165 microRNA 3165 ncRNA chr2-149 chr2 218406308 218406518 + 32.4 0.000 TTS (NM_001206878) TTS (NM_001206878) 3767 NR_029500 407017 NR_029500 ENSG00000199121 MIR26B MIRN26B|hsa-mir-26b|miR-26b microRNA 26b ncRNA chr5-172 chr5 160421868 160422078 + 32.4 0.000 promoter-TSS (NM_001282383) promoter-TSS (NM_001282383) 63 NM_001282383 9232 Hs.350966 NM_004219 ENSG00000164611 PTTG1 EAP1|HPTTG|PTTG|TUTR1 PTTG1 regulator of sister chromatid separation, securin protein-coding chr3-208 chr3 113019552 113019762 + 32.4 0.000 promoter-TSS (NM_001319111) promoter-TSS (NM_001319111) 14 NM_001319111 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr1-580 chr1 9473079 9473289 + 32.4 0.000 Intergenic Intergenic -44188 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr1-498 chr1 156054655 156054865 + 32.4 0.000 promoter-TSS (NM_020131) promoter-TSS (NM_020131) -22 NM_001145264 28956 Hs.632483 NM_014017 ENSG00000116586 LAMTOR2 ENDAP|HSPC003|MAPBPIP|MAPKSP1AP|ROBLD3|Ragulator2|p14 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 protein-coding chr2-609 chr2 111698910 111699120 + 32.4 0.000 Intergenic Intergenic 72119 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr10-328 chr10 122980415 122980625 + 32.4 0.000 exon (NM_001363531, exon 1 of 6) exon (NM_001363531, exon 1 of 6) 119 NM_001363531 118672 Hs.281004 NM_153336 ENSG00000179988 PSTK C10orf89 phosphoseryl-tRNA kinase protein-coding chr13-63 chr13 41194350 41194560 + 32.4 0.000 5' UTR (NM_032138, exon 1 of 1) 5' UTR (NM_032138, exon 1 of 1) 114 NM_032138 84078 Hs.63841 NM_032138 ENSG00000120696 KBTBD7 - kelch repeat and BTB domain containing 7 protein-coding chr10-320 chr10 102713768 102713978 + 32.4 0.000 promoter-TSS (NR_146992) promoter-TSS (NR_146992) 524 NM_004311 403 Hs.182215 NM_004311 ENSG00000138175 ARL3 ARFL3|JBTS35|RP83 ADP ribosylation factor like GTPase 3 protein-coding chr16-186 chr16 684194 684404 + 32.4 0.000 promoter-TSS (NM_001323918) promoter-TSS (NM_001323918) 35 NR_136650 339123 Hs.533771 NM_001005920 ENSG00000161999 JMJD8 C16orf20|PP14397 jumonji domain containing 8 protein-coding chr3-205 chr3 14178619 14178829 + 32.4 0.000 promoter-TSS (NR_148950) promoter-TSS (NR_148950) -52 NM_001354726 7508 Hs.475538 NM_004628 ENSG00000154767 XPC RAD4|XP3|XPCC|p125 XPC complex subunit, DNA damage recognition and repair factor protein-coding chr17-306 chr17 21282365 21282575 + 32.4 0.000 Intergenic L2c|LINE|L2 -2241 NM_145109 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr7-354 chr7 99616719 99616929 + 32.4 0.000 promoter-TSS (NM_001350979) promoter-TSS (NM_001350979) -122 NM_001350979 221785 Hs.446297 NM_145115 ENSG00000197037 ZSCAN25 ZNF498 zinc finger and SCAN domain containing 25 protein-coding chr1-281 chr1 155017436 155017646 + 32.4 0.000 TTS (NM_144622) TTS (NM_144622) 14911 NR_046206 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr7-99 chr7 65038073 65038283 + 32.4 0.000 promoter-TSS (NR_033416) promoter-TSS (NR_033416) -176 NR_033416 643180 Hs.510847 NR_033416 ENSG00000234585 CCT6P3 CCT6-3P chaperonin containing TCP1 subunit 6 pseudogene 3 pseudo chr16-235 chr16 75351321 75351531 + 32.4 0.000 intron (NM_006324, intron 5 of 6) L1MC5|LINE|L1 82077 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr7-279 chr7 47380277 47380487 + 32.4 0.000 intron (NM_022748, intron 16 of 30) intron (NM_022748, intron 16 of 30) 84421 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr10-311 chr10 15097083 15097293 + 32.4 0.000 promoter-TSS (NM_001265601) promoter-TSS (NM_001265601) 8 NM_001265601 10557 Hs.94986 NM_006414 ENSG00000152464 RPP38 - ribonuclease P/MRP subunit p38 protein-coding chr7-242 chr7 6160304 6160514 + 32.4 0.000 intron (NM_032172, intron 17 of 17) intron (NM_032172, intron 17 of 17) 11728 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr17-309 chr17 57875389 57875599 + 32.4 0.000 intron (NM_001271875, intron 3 of 10) intron (NM_001271875, intron 3 of 10) -25450 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr4-102 chr4 128287918 128288128 + 32.4 0.000 promoter-TSS (NM_006320) promoter-TSS (NM_006320) -210 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chr8-248 chr8 140591429 140591639 + 32.4 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 44099 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr5-188 chr5 75511673 75511883 + 32.4 0.000 promoter-TSS (NM_001345921) promoter-TSS (NM_001345921) 28 NM_001345922 51426 Hs.135756 NM_016218 ENSG00000122008 POLK DINB1|DINP|POLQ DNA polymerase kappa protein-coding chr3-649 chr3 25820547 25820757 + 32.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 30562 NM_017897 54995 Hs.55781 NM_017897 ENSG00000151093 OXSM CEM1|FASN2D|KASI|KS 3-oxoacyl-ACP synthase, mitochondrial protein-coding chr13-112 chr13 94549469 94549679 + 32.4 0.000 promoter-TSS (NM_001322183) promoter-TSS (NM_001322183) -168 NM_001322185 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr6-159 chr6 18226610 18226820 + 32.4 0.000 intron (NM_003472, intron 9 of 10) AluJb|SINE|Alu 37815 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr2-226 chr2 65056152 65056362 + 32.3 0.000 promoter-TSS (NM_001319101) promoter-TSS (NM_001319101) -159 NR_134966 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr3-282 chr3 47282659 47282869 + 32.3 0.000 promoter-TSS (NM_025010) promoter-TSS (NM_025010) 35 NM_022342 64147 Hs.373947 NM_022342 ENSG00000088727 KIF9 - kinesin family member 9 protein-coding chr19-411 chr19 11813975 11814185 + 32.3 0.000 promoter-TSS (NM_152357) promoter-TSS (NM_152357) -193 NM_152357 126070 Hs.418192 NM_152357 ENSG00000171295 ZNF440 - zinc finger protein 440 protein-coding chr15-157 chr15 73997152 73997362 + 32.3 0.000 intron (NM_033247, intron 1 of 4) MER51A|LTR|ERV1 2541 NM_033244 5371 Hs.526464 NM_002675 ENSG00000140464 PML MYL|PP8675|RNF71|TRIM19 promyelocytic leukemia protein-coding chr1-202 chr1 45686524 45686734 + 32.3 0.000 promoter-TSS (NM_021639) promoter-TSS (NM_021639) -96 NM_021639 60313 Hs.238432 NM_021639 ENSG00000159592 GPBP1L1 SP192 GC-rich promoter binding protein 1 like 1 protein-coding chr22-231 chr22 28140060 28140270 + 32.3 0.000 intron (NM_001145418, intron 6 of 22) MIRc|SINE|MIR -219553 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr19-658 chr19 10942104 10942314 + 32.3 0.000 Intergenic Intergenic 13398 NM_138358 90580 Hs.164026 NM_138358 ENSG00000142444 TIMM29 C19orf52|TIM29 translocase of inner mitochondrial membrane 29 protein-coding chr16-182 chr16 89560419 89560629 + 32.3 0.000 promoter-TSS (NM_000977) promoter-TSS (NM_000977) -133 NM_000977 6137 Hs.410817 NM_000977 ENSG00000167526 RPL13 BBC1|D16S444E|D16S44E|L13 ribosomal protein L13 protein-coding chr4-277 chr4 139872377 139872587 + 32.3 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 206663 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr17-228 chr17 18087770 18087980 + 32.3 0.000 promoter-TSS (NM_001330144) promoter-TSS (NM_001330144) -73 NM_001330144 1819 Hs.78582 NM_001388 ENSG00000108591 DRG2 - developmentally regulated GTP binding protein 2 protein-coding chr20-198 chr20 32823205 32823415 + 32.3 0.000 intron (NM_012325, intron 1 of 6) intron (NM_012325, intron 1 of 6) 3356 NM_012325 22919 Hs.472437 NM_012325 ENSG00000101367 MAPRE1 EB1 microtubule associated protein RP/EB family member 1 protein-coding chr22-255 chr22 29380438 29380648 + 32.3 0.000 intron (NM_001166019, intron 1 of 20) L2a|LINE|L2 8027 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr6-64 chr6 3063702 3063912 + 32.3 0.000 promoter-TSS (NM_003804) promoter-TSS (NM_003804) -160 NM_003804 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 IMD57|RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr11-529 chr11 34940107 34940317 + 32.3 0.000 intron (NM_003477, intron 2 of 10) intron (NM_003477, intron 2 of 10) -1625 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr20-182 chr20 17971544 17971754 + 32.3 0.000 intron (NM_001310339, intron 2 of 2) intron (NM_001310339, intron 2 of 2) 2631 NM_001310338 92667 Hs.320823 NM_052865 ENSG00000125871 MGME1 C20orf72|DDK1|MTDPS11|bA504H3.4 mitochondrial genome maintenance exonuclease 1 protein-coding chr1-290 chr1 1908897 1909107 + 32.3 0.000 Intergenic CpG -6258 NM_138705 163688 Hs.85902 NM_138705 ENSG00000169885 CALML6 CAGLP calmodulin like 6 protein-coding chr10-282 chr10 554277 554487 + 32.3 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -74182 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr2-562 chr2 73896773 73896983 + 32.3 0.000 intron (NM_001615, intron 1 of 8) intron (NM_001615, intron 1 of 8) 3870 NM_001199893 72 Hs.516105 NM_001615 ENSG00000163017 ACTG2 ACT|ACTA3|ACTE|ACTL3|ACTSG|VSCM actin gamma 2, smooth muscle protein-coding chr9-128 chr9 137255067 137255277 + 32.3 0.000 promoter-TSS (NM_015456) promoter-TSS (NM_015456) -155 NM_015456 25920 Hs.521809 NM_015456 ENSG00000188986 NELFB COBRA1|NELF-B negative elongation factor complex member B protein-coding chr12-225 chr12 34022429 34022639 + 32.3 0.000 promoter-TSS (NM_032834) promoter-TSS (NM_032834) 38 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr15-108 chr15 91867687 91867897 + 32.3 0.000 intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 13488 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr18-67 chr18 21600733 21600943 + 32.3 0.000 promoter-TSS (NM_052911) promoter-TSS (NM_052911) -134 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding chr2-669 chr2 191318961 191319171 + 32.3 0.000 intron (NM_012223, intron 3 of 28) intron (NM_012223, intron 3 of 28) 73662 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr15-190 chr15 81327565 81327775 + 32.3 0.000 intron (NR_120365, intron 1 of 6) intron (NR_120365, intron 1 of 6) 3337 NR_120365 101929655 Hs.696654 NR_120365 TMC3-AS1 - TMC3 antisense RNA 1 ncRNA chr2-285 chr2 47199026 47199236 + 32.3 0.000 intron (NR_110208, intron 4 of 4) intron (NR_110208, intron 4 of 4) -22195 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr11-400 chr11 36510096 36510306 + 32.3 0.000 promoter-TSS (NM_004620) promoter-TSS (NM_004620) 71 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr11-681 chr11 132220558 132220768 + 32.3 0.000 intron (NM_016522, intron 3 of 6) intron (NM_016522, intron 3 of 6) -63639 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr12-314 chr12 49189118 49189328 + 32.3 0.000 promoter-TSS (NM_006009) promoter-TSS (NM_006009) 101 NM_001270400 7846 Hs.654422 NM_006009 ENSG00000167552 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin alpha 1a protein-coding chr3-171 chr3 194871561 194871771 + 32.3 0.000 Intergenic Intergenic -102957 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr19-536 chr19 50723042 50723252 + 32.3 0.000 promoter-TSS (NM_002975) promoter-TSS (NM_002975) -217 NM_002975 6320 Hs.512680 NM_002975 ENSG00000105472 CLEC11A CLECSF3|LSLCL|P47|SCGF C-type lectin domain containing 11A protein-coding chr12-331 chr12 66036381 66036591 + 32.3 0.000 Intergenic Intergenic -5420 NR_146530 105369810 NR_146530 ENSG00000256259 LINC02425 - long intergenic non-protein coding RNA 2425 ncRNA chr20-181 chr20 10521204 10521414 + 32.3 0.000 intron (NM_001009608, intron 2 of 7) HAL1|LINE|L1 86004 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr8-288 chr8 100667623 100667833 + 32.2 0.000 Intergenic Charlie20a|DNA|hAT-Charlie -18063 NM_152628 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr20-74 chr20 31951993 31952203 + 32.2 0.000 promoter-TSS (NM_030815) promoter-TSS (NM_030815) -52 NM_030815 81572 Hs.435755 NM_030815 ENSG00000088356 PDRG1 C20orf126|PDRG p53 and DNA damage regulated 1 protein-coding chr11-415 chr11 44066080 44066290 + 32.2 0.000 promoter-TSS (NM_001127219) promoter-TSS (NM_001127219) -85 NM_032592 84680 Hs.126706 NM_032592 ENSG00000110455 ACCS ACS|PHACS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) protein-coding chr1-536 chr1 2207605 2207815 + 32.2 0.000 promoter-TSS (NM_001146310) promoter-TSS (NM_001146310) 23 NM_001146310 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr11-737 chr11 12587698 12587908 + 32.2 0.000 Intergenic LTR33A|LTR|ERVL -86618 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr6-126 chr6 34392651 34392861 + 32.2 0.000 promoter-TSS (NM_006703) promoter-TSS (NM_006703) -87 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr3-306 chr3 23712885 23713095 + 32.2 0.000 Intergenic Intergenic -92965 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr4-93 chr4 70993506 70993716 + 32.2 0.000 promoter-TSS (NM_000788) promoter-TSS (NM_000788) -38 NM_000788 1633 Hs.709 NM_000788 ENSG00000156136 DCK - deoxycytidine kinase protein-coding chr22-220 chr22 37849400 37849610 + 32.2 0.000 promoter-TSS (NM_016091) promoter-TSS (NM_016091) 86 NM_016091 51386 Hs.446852 NM_016091 ENSG00000100129 EIF3L EIF3EIP|EIF3S11|EIF3S6IP|HSPC021|HSPC025|MSTP005 eukaryotic translation initiation factor 3 subunit L protein-coding chr1-416 chr1 2212816 2213026 + 32.2 0.000 promoter-TSS (NM_001282670) promoter-TSS (NM_001282670) -201 NM_001282670 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr20-244 chr20 47546332 47546542 + 32.2 0.000 intron (NM_181659, intron 1 of 22) L2a|LINE|L2 44550 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr19-385 chr19 3671009 3671219 + 32.2 0.000 intron (NM_001195733, intron 1 of 16) intron (NM_001195733, intron 1 of 16) 29354 NM_012398 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr19-284 chr19 38374542 38374752 + 32.2 0.000 promoter-TSS (NM_002812) promoter-TSS (NM_002812) 97 NM_002812 5714 Hs.78466 NM_002812 ENSG00000099341 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome 26S subunit, non-ATPase 8 protein-coding chr1-714 chr1 85407299 85407509 + 32.2 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) -2898 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr3-132 chr3 150603220 150603430 + 32.2 0.000 promoter-TSS (NM_016275) promoter-TSS (NM_016275) 4 NM_016275 51714 Hs.369052 NM_016275 ENSG00000198843 SELENOT SELT selenoprotein T protein-coding chr8-34 chr8 123416515 123416725 + 32.2 0.000 promoter-TSS (NM_001283024) promoter-TSS (NM_001283024) -105 NM_001283027 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr18-54 chr18 5237858 5238068 + 32.2 0.000 promoter-TSS (NR_026849) promoter-TSS (NR_026849) 66 NR_026849 147525 Hs.657197 NM_152471 LINC00526 C18orf18|HsT959 long intergenic non-protein coding RNA 526 ncRNA chr1-745 chr1 87684289 87684499 + 32.2 0.000 Intergenic Intergenic -312739 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr2-401 chr2 230411737 230411947 + 32.2 0.000 Intergenic Intergenic -4314 NM_001206703 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr8-109 chr8 23404105 23404315 + 32.2 0.000 promoter-TSS (NM_002318) promoter-TSS (NM_002318) -90 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr13-30 chr13 40771130 40771340 + 32.2 0.000 promoter-TSS (NM_005830) promoter-TSS (NM_005830) -45 NM_005830 10240 Hs.596607 NM_005830 ENSG00000102738 MRPS31 IMOGN38|MRP-S31|S31mt mitochondrial ribosomal protein S31 protein-coding chr22-257 chr22 46069033 46069243 + 32.2 0.000 intron (NR_148973, intron 1 of 1) intron (NR_148973, intron 1 of 1) 1883 NR_148973 642648 Hs.631363 NR_148973 LOC642648 - uncharacterized LOC642648 ncRNA chr2-250 chr2 9112191 9112401 + 32.2 0.000 Intergenic Intergenic -94469 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr1-486 chr1 173824608 173824818 + 32.2 0.000 promoter-TSS (NM_001127181) promoter-TSS (NM_001127181) 40 NM_018122 55157 Hs.647707 NM_018122 ENSG00000117593 DARS2 ASPRS|LBSL|MT-ASPRS|mtAspRS aspartyl-tRNA synthetase 2, mitochondrial protein-coding chr17-421 chr17 77316020 77316230 + 32.2 0.000 intron (NM_001113491, intron 2 of 11) intron (NM_001113491, intron 2 of 11) -3390 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr7-224 chr7 140316203 140316413 + 32.2 0.000 Intergenic Intergenic 82222 NM_001363375 84255 Hs.446021 NM_032295 ENSG00000157800 SLC37A3 - solute carrier family 37 member 3 protein-coding chr5-354 chr5 14055642 14055852 + 32.2 0.000 Intergenic Intergenic -87595 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr7-561 chr7 66748255 66748465 + 32.2 0.000 intron (NM_001367749, intron 1 of 4) L4_A_Mam|LINE|RTE-X -7522 NM_001287061 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr7-321 chr7 38178146 38178356 + 32.2 0.000 promoter-TSS (NM_001363345) promoter-TSS (NM_001363345) 6 NM_001363344 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr3-412 chr3 197950200 197950410 + 32.2 0.000 promoter-TSS (NM_001134435) promoter-TSS (NM_001134435) 115 NM_001316311 6165 Hs.529631 NM_000996 ENSG00000182899 RPL35A DBA5|L35A|eL33 ribosomal protein L35a protein-coding chr4-206 chr4 85474915 85475125 + 32.2 0.000 promoter-TSS (NM_001025616) promoter-TSS (NM_001025616) -130 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr12-438 chr12 27343714 27343924 + 32.2 0.000 intron (NM_001248003, intron 1 of 14) intron (NM_001248003, intron 1 of 14) 10983 NM_020183 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr6-253 chr6 43116344 43116554 + 32.2 0.000 intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) 39635 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr4-207 chr4 88378785 88378995 + 32.2 0.000 5' UTR (NM_017912, exon 1 of 23) 5' UTR (NM_017912, exon 1 of 23) 151 NM_017912 55008 Hs.529317 NM_017912 ENSG00000138642 HERC6 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 protein-coding chr10-305 chr10 72784718 72784928 + 32.2 0.000 intron (NR_073062, intron 3 of 9) intron (NR_073062, intron 3 of 9) 63794 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr2-141 chr2 238203492 238203702 + 32.2 0.000 promoter-TSS (NM_030768) promoter-TSS (NM_030768) 98 NM_030768 80895 Hs.92033 NM_030768 ENSG00000132323 ILKAP ILKAP2|ILKAP3|PP2C-DELTA|PPM1O ILK associated serine/threonine phosphatase protein-coding chr10-161 chr10 113385258 113385468 + 32.2 0.000 Intergenic Intergenic -165468 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr1-402 chr1 114670062 114670272 + 32.2 0.000 promoter-TSS (NM_198459) promoter-TSS (NM_198459) -118 NM_198459 163259 Hs.654928 NM_198459 ENSG00000175984 DENND2C dJ1156J9.1 DENN domain containing 2C protein-coding chr13-43 chr13 52617438 52617648 + 32.2 0.000 promoter-TSS (NM_001011724) promoter-TSS (NM_001011724) 18 NM_001011725 144983 Hs.447506 NM_001011724 ENSG00000139675 HNRNPA1L2 - heterogeneous nuclear ribonucleoprotein A1 like 2 protein-coding chr22-219 chr22 36362951 36363161 + 32.2 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 25011 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr7-214 chr7 6577457 6577667 + 32.1 0.000 5' UTR (NM_001134387, exon 1 of 8) 5' UTR (NM_001134387, exon 1 of 8) 108 NM_001371299 chr16-164 chr16 714877 715087 + 32.1 0.000 promoter-TSS (NM_024042) promoter-TSS (NM_024042) -136 NM_024042 79006 Hs.533772 NM_024042 ENSG00000103260 METRN C16orf23|c380A1.2 meteorin, glial cell differentiation regulator protein-coding chr15-100 chr15 84600777 84600987 + 32.1 0.000 promoter-TSS (NM_017894) promoter-TSS (NM_017894) -127 NM_017894 54993 Hs.594023 NM_017894 ENSG00000176371 ZSCAN2 ZFP29|ZNF854 zinc finger and SCAN domain containing 2 protein-coding chr5-267 chr5 150112686 150112896 + 32.1 0.000 intron (NM_005211, intron 1 of 21) intron (NM_005211, intron 1 of 21) 581 NM_005211 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr1-172 chr1 151909406 151909616 + 32.1 0.000 promoter-TSS (NM_053055) promoter-TSS (NM_053055) 0 NM_053055 117145 Hs.164070 NM_053055 ENSG00000159445 THEM4 CTMP thioesterase superfamily member 4 protein-coding chr9-174 chr9 121598197 121598407 + 32.1 0.000 intron (NM_032552, intron 1 of 16) CpG 31200 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr12-224 chr12 26810355 26810565 + 32.1 0.000 intron (NM_002223, intron 1 of 56) intron (NM_002223, intron 1 of 56) 22734 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr5-366 chr5 151452132 151452342 + 32.1 0.000 intron (NM_001349740, intron 1 of 11) intron (NM_001349740, intron 1 of 11) 4634 NM_001349740 206358 Hs.269004 NM_078483 ENSG00000123643 SLC36A1 Dct1|LYAAT1|PAT1|TRAMD3 solute carrier family 36 member 1 protein-coding chr17-741 chr17 2030614 2030824 + 32.1 0.000 intron (NM_001383, intron 1 of 12) intron (NM_001383, intron 1 of 12) 607 NR_144474 1801 Hs.513856 NM_001383 ENSG00000108963 DPH1 DEDSSH|DPH2L|DPH2L1|OVCA1 diphthamide biosynthesis 1 protein-coding chr9-245 chr9 98989670 98989880 + 32.1 0.000 intron (NM_001855, intron 5 of 41) intron (NM_001855, intron 5 of 41) 45868 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr16-203 chr16 3283051 3283261 + 32.1 0.000 promoter-TSS (NM_005741) promoter-TSS (NM_005741) -335 NM_005741 10127 Hs.611475 NM_005741 ENSG00000006194 ZNF263 FPM315|ZKSCAN12|ZSCAN44 zinc finger protein 263 protein-coding chr4-309 chr4 145131047 145131257 + 32.1 0.000 Intergenic Intergenic -32611 NM_001256708 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr18-58 chr18 57737714 57737924 + 32.1 0.000 intron (NM_005603, intron 1 of 27) intron (NM_005603, intron 1 of 27) 65496 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr8-428 chr8 133389357 133389567 + 32.1 0.000 Intergenic L2c|LINE|L2 -92158 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr17-562 chr17 63600766 63600976 + 32.1 0.000 promoter-TSS (NM_016360) promoter-TSS (NM_016360) -24 NM_016360 51204 Hs.174134 NM_016360 ENSG00000136463 TACO1 CCDC44 translational activator of cytochrome c oxidase I protein-coding chr15-79 chr15 43777110 43777320 + 32.1 0.000 promoter-TSS (NM_025165) promoter-TSS (NM_025165) 129 NM_001199877 10169 Hs.424126 NM_005770 ENSG00000140264 SERF2 4F5REL|FAM2C|H4F5REL|HsT17089 small EDRK-rich factor 2 protein-coding chr11-567 chr11 18634599 18634809 + 32.1 0.000 promoter-TSS (NM_194285) promoter-TSS (NM_194285) -362 NM_194285 144108 Hs.738650 NM_194285 ENSG00000179119 SPTY2D1 Spt2 SPT2 chromatin protein domain containing 1 protein-coding chr17-270 chr17 18039176 18039386 + 32.1 0.000 promoter-TSS (NM_024052) promoter-TSS (NM_024052) -113 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr14-217 chr14 75995514 75995724 + 32.1 0.000 intron (NM_001102564, intron 2 of 8) intron (NM_001102564, intron 2 of 8) 9856 NM_001255995 112752 Hs.532626 NM_052873 ENSG00000119650 IFT43 C14orf179|CED3|RP81|SRTD18 intraflagellar transport 43 protein-coding chr1-476 chr1 93879155 93879365 + 32.1 0.000 promoter-TSS (NM_014597) promoter-TSS (NM_014597) -54 NM_014597 30836 Hs.85769 NM_014597 ENSG00000067334 DNTTIP2 ERBP|FCF2|HSU15552|LPTS-RP2|TdIF2 deoxynucleotidyltransferase terminal interacting protein 2 protein-coding chr22-253 chr22 20807454 20807664 + 32.1 0.000 intron (NM_001362863, intron 8 of 53) intron (NM_001362863, intron 8 of 53) 33446 NM_000185 3053 Hs.474270 NM_000185 ENSG00000099937 SERPIND1 D22S673|HC2|HCF2|HCII|HLS2|LS2|THPH10 serpin family D member 1 protein-coding chr17-355 chr17 82497119 82497329 + 32.1 0.000 Intergenic CpG -22508 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr4-146 chr4 3292589 3292799 + 32.1 0.000 Intergenic CpG -21453 NM_198229 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr5-192 chr5 172869331 172869541 + 32.1 0.000 intron (NM_001031711, intron 1 of 9) intron (NM_001031711, intron 1 of 9) 35185 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr19-305 chr19 42177099 42177309 + 32.1 0.000 Intergenic CpG 40473 NR_073050 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr3-211 chr3 128726053 128726263 + 32.1 0.000 promoter-TSS (NM_004637) promoter-TSS (NM_004637) 22 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr12-333 chr12 98475391 98475601 + 32.1 0.000 Intergenic Intergenic -18351 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr8-106 chr8 100952216 100952426 + 32.1 0.000 promoter-TSS (NM_145690) promoter-TSS (NM_145690) -301 NM_145690 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr2-387 chr2 130342213 130342423 + 32.1 0.000 promoter-TSS (NM_001321119) promoter-TSS (NM_001321119) 93 NM_001320305 92856 Hs.91579 NM_033416 ENSG00000136718 IMP4 BXDC4 IMP U3 small nucleolar ribonucleoprotein 4 protein-coding chr10-235 chr10 33661753 33661963 + 32.1 0.000 Intergenic Intergenic 110822 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr22-180 chr22 41308180 41308390 + 32.1 0.000 intron (NM_017590, intron 1 of 22) intron (NM_017590, intron 1 of 22) -5916 NM_001317930 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr19-445 chr19 17303403 17303613 + 32.1 0.000 promoter-TSS (NM_024527) promoter-TSS (NM_024527) -83 NM_024527 79575 Hs.515664 NM_024527 ENSG00000127220 ABHD8 - abhydrolase domain containing 8 protein-coding chr22-221 chr22 29780900 29781110 + 32.1 0.000 Intergenic Intergenic 13636 NM_001003684 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding chr9-139 chr9 137590514 137590724 + 32.1 0.000 promoter-TSS (NM_138462) promoter-TSS (NM_138462) -107 NM_138462 116225 Hs.128096 NM_138462 ENSG00000165724 ZMYND19 MIZIP zinc finger MYND-type containing 19 protein-coding chr2-267 chr2 85354475 85354685 + 32.1 0.000 promoter-TSS (NR_138133) promoter-TSS (NR_138133) -52 NM_017750 54884 Hs.440401 NM_017750 ENSG00000042445 RETSAT - retinol saturase protein-coding chr2-380 chr2 216373596 216373806 + 32.1 0.000 Intergenic Intergenic -1218 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr4-219 chr4 51844632 51844842 + 32.1 0.000 intron (NM_001287755, intron 1 of 10) CpG 1158 NM_001287755 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr6-92 chr6 75243767 75243977 + 32.1 0.000 promoter-TSS (NR_158783) promoter-TSS (NR_158783) -71 NM_001366293 1347 Hs.70312 NM_001865 ENSG00000112695 COX7A2 COX7AL|COX7AL1|COXVIIAL|COXVIIa-L|VIIAL cytochrome c oxidase subunit 7A2 protein-coding chr7-398 chr7 22858932 22859142 + 32.1 0.000 intron (NR_146320, intron 3 of 4) intron (NR_146320, intron 3 of 4) 2424 NR_003075 692210 NR_003075 ENSG00000221740 SNORD93 HBII-336 small nucleolar RNA, C/D box 93 snoRNA chr1-327 chr1 246817870 246818080 + 32.1 0.000 Intergenic Intergenic 28358 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr17-584 chr17 50372969 50373179 + 31.9 0.000 promoter-TSS (NM_001166131) promoter-TSS (NM_001166131) 110 NM_016504 51264 Hs.7736 NM_016504 ENSG00000108826 MRPL27 L27mt mitochondrial ribosomal protein L27 protein-coding chr11-278 chr11 125569311 125569521 + 31.9 0.000 promoter-TSS (NM_004879) promoter-TSS (NM_004879) -61 NM_001290135 9538 Hs.643514 NM_004879 ENSG00000149547 EI24 EPG4|PIG8|TP53I8 EI24 autophagy associated transmembrane protein protein-coding chr11-449 chr11 10693606 10693816 + 31.9 0.000 promoter-TSS (NM_001100167) promoter-TSS (NM_001100167) -137 NM_001100167 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr7-347 chr7 120950547 120950757 + 31.9 0.000 promoter-TSS (NM_198267) promoter-TSS (NM_198267) -125 NM_019071 54556 Hs.489811 NM_019071 ENSG00000071243 ING3 Eaf4|ING2|MEAF4|p47ING3 inhibitor of growth family member 3 protein-coding chr5-319 chr5 171985061 171985271 + 31.9 0.000 intron (NM_012300, intron 1 of 12) L2c|LINE|L2 21707 NM_033645 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr9-165 chr9 125707127 125707337 + 31.9 0.000 promoter-TSS (NM_001006620) promoter-TSS (NM_001006620) 2 NM_001006619 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr5-296 chr5 36071216 36071426 + 31.9 0.000 Intergenic Intergenic -4439 NR_031764 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr1-326 chr1 88684034 88684244 + 31.9 0.000 promoter-TSS (NM_001320709) promoter-TSS (NM_001320709) -5 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr5-115 chr5 61301870 61302080 + 31.9 0.000 Intergenic Intergenic -30283 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr3-231 chr3 42590747 42590957 + 31.9 0.000 promoter-TSS (NM_001370300) promoter-TSS (NM_001370300) -8 NM_001370300 51188 Hs.534454 NM_016305 ENSG00000008324 SS18L2 KIAA-iso SS18 like 2 protein-coding chr5-253 chr5 14450035 14450245 + 31.9 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -13843 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr9-443 chr9 131678541 131678751 + 31.9 0.000 intron (NM_001304275, intron 1 of 23) intron (NM_001304275, intron 1 of 23) 31196 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr2-312 chr2 85616041 85616251 + 31.9 0.000 promoter-TSS (NM_001256725) promoter-TSS (NM_001256725) -40 NM_006590 10713 Hs.654745 NM_006590 ENSG00000168883 USP39 65K|CGI-21|HSPC332|SAD1|SNRNP65 ubiquitin specific peptidase 39 protein-coding chr5-243 chr5 133953003 133953213 + 31.9 0.000 Intergenic Intergenic 15517 NM_020199 56951 Hs.744034 NM_020199 ENSG00000113583 C5orf15 HTGN29|KCT2 chromosome 5 open reading frame 15 protein-coding chr3-314 chr3 186104129 186104339 + 31.9 0.000 intron (NM_004454, intron 5 of 12) intron (NM_004454, intron 5 of 12) 4855 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr2-460 chr2 9333662 9333872 + 31.9 0.000 intron (NM_003887, intron 7 of 27) intron (NM_003887, intron 7 of 27) 88824 NR_134951 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr19-337 chr19 23914846 23915056 + 31.9 0.000 promoter-TSS (NM_001348689) promoter-TSS (NM_001348689) 65 NM_001348688 730087 Hs.655305 NM_001190829 ENSG00000213967 ZNF726 ZNF92P3 zinc finger protein 726 protein-coding chr10-254 chr10 123154806 123155016 + 31.9 0.000 intron (NM_004725, intron 1 of 7) CpG 509 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr1-355 chr1 150268960 150269170 + 31.9 0.000 promoter-TSS (NM_001077628) promoter-TSS (NM_001077628) -49 NM_001077628 51107 Hs.108408 NM_016022 ENSG00000117362 APH1A 6530402N02Rik|APH-1|APH-1A|CGI-78 aph-1 homolog A, gamma-secretase subunit protein-coding chr7-234 chr7 47537371 47537581 + 31.9 0.000 intron (NM_022748, intron 1 of 30) CpG 44635 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr18-66 chr18 7771922 7772132 + 31.9 0.000 intron (NM_002845, intron 1 of 30) L3|LINE|CR1 204711 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr19-304 chr19 41427341 41427551 + 31.9 0.000 5' UTR (NM_198540, exon 2 of 3) 5' UTR (NM_198540, exon 2 of 3) 1284 NM_198540 374907 Hs.441681 NM_198540 ENSG00000177191 B3GNT8 B3GALT7|BGALT15|beta3Gn-T8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 protein-coding chr8-117 chr8 22658803 22659013 + 31.9 0.000 intron (NM_018688, intron 1 of 8) intron (NM_018688, intron 1 of 8) 10213 NM_018688 55909 Hs.433722 NM_018688 ENSG00000147439 BIN3 - bridging integrator 3 protein-coding chr10-347 chr10 34739766 34739976 + 31.9 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 75425 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr14-64 chr14 99036020 99036230 + 31.9 0.000 Intergenic Intergenic 236072 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr2-478 chr2 43596073 43596283 + 31.9 0.000 promoter-TSS (NM_001271643) promoter-TSS (NM_001271643) -132 NM_001345925 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding chr1-801 chr1 234495331 234495541 + 31.9 0.000 Intergenic Intergenic -16257 NM_005646 6894 Hs.498115 NM_005646 ENSG00000059588 TARBP1 TRM3|TRMT3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding chr1-523 chr1 67570582 67570792 + 31.8 0.000 Intergenic Intergenic -114514 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr2-473 chr2 174663687 174663897 + 31.8 0.000 intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) 19107 NM_001077269 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr19-389 chr19 12035664 12035874 + 31.8 0.000 promoter-TSS (NM_001080411) promoter-TSS (NM_001080411) -28 NM_001308351 163059 Hs.667776 NM_152602 ENSG00000197647 ZNF433 - zinc finger protein 433 protein-coding chr16-299 chr16 1722196 1722406 + 31.8 0.000 intron (NM_001040439, intron 1 of 30) (CTGCCTC)n|Simple_repeat|Simple_repeat -12684 NR_036138 100423012 NR_036138 ENSG00000265820 MIR3177 mir-3177 microRNA 3177 ncRNA chr2-367 chr2 218731735 218731945 + 31.8 0.000 intron (NM_014640, intron 2 of 19) intron (NM_014640, intron 2 of 19) 21005 NM_014640 9654 Hs.471405 NM_014640 ENSG00000135912 TTLL4 - tubulin tyrosine ligase like 4 protein-coding chr1-242 chr1 161749790 161750000 + 31.8 0.000 exon (NM_007240, exon 1 of 6) exon (NM_007240, exon 1 of 6) 109 NM_007240 11266 Hs.416216 NM_007240 ENSG00000081721 DUSP12 DUSP1|YVH1 dual specificity phosphatase 12 protein-coding chr19-328 chr19 4867597 4867807 + 31.8 0.000 promoter-TSS (NM_001164194) promoter-TSS (NM_001164194) -35 NM_001164189 10226 Hs.140452 NM_005817 ENSG00000105355 PLIN3 M6PRBP1|PP17|TIP47 perilipin 3 protein-coding chr1-664 chr1 183268198 183268408 + 31.8 0.000 intron (NM_170706, intron 8 of 10) intron (NM_170706, intron 8 of 10) 36571 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr10-186 chr10 91409489 91409699 + 31.8 0.000 promoter-TSS (NR_104291) promoter-TSS (NR_104291) 359 NM_001348365 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr19-334 chr19 1408890 1409100 + 31.8 0.000 intron (NM_001352035, intron 1 of 10) intron (NM_001352035, intron 1 of 10) 1409 NM_001352035 26528 Hs.222510 NM_018959 ENSG00000071626 DAZAP1 - DAZ associated protein 1 protein-coding chr11-351 chr11 65096668 65096878 + 31.8 0.000 intron (NR_073519, intron 1 of 9) intron (NR_073519, intron 1 of 9) 559 NR_073519 738 Hs.277517 NM_013265 ENSG00000149823 VPS51 ANG2|ANG3|C11orf2|C11orf3|FFR VPS51 subunit of GARP complex protein-coding chr10-219 chr10 58385168 58385378 + 31.8 0.000 promoter-TSS (NM_003201) promoter-TSS (NM_003201) 130 NM_001270782 7019 Hs.594250 NM_003201 ENSG00000108064 TFAM MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 transcription factor A, mitochondrial protein-coding chr2-201 chr2 128028160 128028370 + 31.8 0.000 promoter-TSS (NM_001330302) promoter-TSS (NM_001330302) -206 NM_001330302 79595 Hs.32995 NM_024545 ENSG00000136715 SAP130 - Sin3A associated protein 130 protein-coding chr11-294 chr11 73323523 73323733 + 31.8 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -14267 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr22-260 chr22 24107818 24108028 + 31.8 0.000 intron (NM_012295, intron 26 of 36) intron (NM_012295, intron 26 of 36) -73564 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr4-304 chr4 77994392 77994602 + 31.8 0.000 Intergenic Intergenic -62826 NM_025074 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr6-176 chr6 112087326 112087536 + 31.8 0.000 promoter-TSS (NM_016262) promoter-TSS (NM_016262) 51 NM_016262 51175 Hs.34851 NM_016262 ENSG00000074935 TUBE1 TUBE|dJ142L7.2 tubulin epsilon 1 protein-coding chr22-73 chr22 21735866 21736076 + 31.8 0.000 promoter-TSS (NR_130910) promoter-TSS (NR_130910) -177 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr20-93 chr20 58624008 58624218 + 31.8 0.000 Intergenic Intergenic -10659 NR_125359 79160 Hs.280135 NR_125359 ENSG00000268941 LINC01711 - long intergenic non-protein coding RNA 1711 ncRNA chr5-347 chr5 92688066 92688276 + 31.8 0.000 Intergenic Intergenic 883172 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr3-312 chr3 149501613 149501823 + 31.8 0.000 intron (NM_004617, intron 4 of 4) MIRc|SINE|MIR 27021 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr12-522 chr12 54229721 54229931 + 31.8 0.000 Intergenic Intergenic 1650 NR_039851 100616400 NR_039851 ENSG00000283803 MIR3198-2 mir-3198-2 microRNA 3198-2 ncRNA chr10-376 chr10 34723806 34724016 + 31.8 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 91385 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr17-318 chr17 57927438 57927648 + 31.8 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) -24154 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr11-526 chr11 9774713 9774923 + 31.8 0.000 intron (NR_036485, intron 1 of 2) intron (NR_036485, intron 1 of 2) -15285 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chr22-224 chr22 42614676 42614886 + 31.8 0.000 promoter-TSS (NR_029422) promoter-TSS (NR_029422) 102 NR_103820 84271 Hs.505802 NM_032311 ENSG00000100227 POLDIP3 PDIP3|PDIP46|SKAR DNA polymerase delta interacting protein 3 protein-coding chr2-448 chr2 46073490 46073700 + 31.8 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -223812 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr6-95 chr6 110958554 110958764 + 31.8 0.000 promoter-TSS (NM_138408) promoter-TSS (NM_138408) -47 NM_138408 112495 Hs.418520 NM_138408 ENSG00000155115 GTF3C6 C6orf51|TFIIIC35|bA397G5.3 general transcription factor IIIC subunit 6 protein-coding chr9-400 chr9 129568086 129568296 + 31.8 0.000 Intergenic Intergenic -40693 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr2-237 chr2 41840862 41841072 + 31.8 0.000 Intergenic CpG -36588 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr1-594 chr1 226662769 226662979 + 31.8 0.000 intron (NR_103784, intron 1 of 1) intron (NR_103784, intron 1 of 1) 12194 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr16-220 chr16 30378259 30378469 + 31.8 0.000 promoter-TSS (NM_001214907) promoter-TSS (NM_001214907) 50 NM_001214907 197407 Hs.513501 NM_152652 ENSG00000180035 ZNF48 ZNF553 zinc finger protein 48 protein-coding chr16-178 chr16 370515 370725 + 31.8 0.000 promoter-TSS (NM_006428) promoter-TSS (NM_006428) -82 NM_006428 10573 Hs.513230 NM_006428 ENSG00000086504 MRPL28 MAAT1|p15 mitochondrial ribosomal protein L28 protein-coding chr13-20 chr13 114155402 114155612 + 31.8 0.000 Intergenic Intergenic -22884 NM_007368 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr12-248 chr12 124524189 124524399 + 31.8 0.000 intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 43318 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr17-452 chr17 80126055 80126265 + 31.8 0.000 Intergenic L1ME1|LINE|L1 20968 NM_014740 9775 Hs.389649 NM_014740 ENSG00000141543 EIF4A3 DDX48|Fal1|MUK34|NMP265|NUK34|RCPS|eIF-4A-III|eIF4A-III|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding chr6-210 chr6 10014604 10014814 + 31.8 0.000 Intergenic Intergenic -389793 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr6-103 chr6 138572467 138572677 + 31.8 0.000 promoter-TSS (NM_020464) promoter-TSS (NM_020464) -3 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr19-438 chr19 13398772 13398982 + 31.7 0.000 intron (NM_023035, intron 3 of 46) intron (NM_023035, intron 3 of 46) 107583 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr9-216 chr9 120580097 120580307 + 31.7 0.000 promoter-TSS (NM_018249) promoter-TSS (NM_018249) -32 NM_001272039 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr20-128 chr20 36493712 36493922 + 31.7 0.000 intron (NM_183006, intron 1 of 6) MIRb|SINE|MIR 32022 NM_183006 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr2-593 chr2 233982548 233982758 + 31.7 0.000 intron (NM_024080, intron 19 of 25) intron (NM_024080, intron 19 of 25) 65280 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|LTrpC-6|TRPP8|trp-p8 transient receptor potential cation channel subfamily M member 8 protein-coding chr6-49 chr6 109094685 109094895 + 31.7 0.000 promoter-TSS (NM_014454) promoter-TSS (NM_014454) 56 NM_014454 27244 Hs.591336 NM_014454 ENSG00000080546 SESN1 PA26|SEST1 sestrin 1 protein-coding chr1-509 chr1 66436580 66436790 + 31.7 0.000 Intergenic MIR3|SINE|MIR 82150 NM_001297442 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr16-219 chr16 1420914 1421124 + 31.7 0.000 promoter-TSS (NM_001272051) promoter-TSS (NM_001272051) -272 NM_001272051 283951 Hs.58373 NM_001010878 ENSG00000174109 C16orf91 CCSMST1|URLC5|gs103 chromosome 16 open reading frame 91 protein-coding chr2-143 chr2 38602873 38603083 + 31.7 0.000 promoter-TSS (NM_001142650) promoter-TSS (NM_001142650) -50 NM_138394 92906 Hs.445497 NM_138394 ENSG00000143889 HNRNPLL HNRPLL|SRRF heterogeneous nuclear ribonucleoprotein L like protein-coding chr17-364 chr17 858817 859027 + 31.7 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 5189 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr9-378 chr9 113340344 113340554 + 31.7 0.000 promoter-TSS (NM_001006615) promoter-TSS (NM_001006615) -174 NM_001012361 114987 Hs.133331 NM_145241 ENSG00000148225 WDR31 - WD repeat domain 31 protein-coding chr6-48 chr6 85643316 85643526 + 31.7 0.000 promoter-TSS (NM_001159673) promoter-TSS (NM_001159673) -499 NM_001159673 10492 Hs.571177 NM_006372 ENSG00000135316 SYNCRIP GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q synaptotagmin binding cytoplasmic RNA interacting protein protein-coding chr15-277 chr15 41337719 41337929 + 31.7 0.000 intron (NM_001243144, intron 1 of 8) L2a|LINE|L2 4943 NM_001243144 51203 Hs.615092 NM_016359 ENSG00000137804 NUSAP1 ANKT|BM037|LNP|NUSAP|PRO0310p1|Q0310|SAPL nucleolar and spindle associated protein 1 protein-coding chr10-544 chr10 699817 700027 + 31.7 0.000 Intergenic Intergenic -10254 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr6-263 chr6 158284415 158284625 + 31.7 0.000 Intergenic L1MEd|LINE|L1 -27945 NM_001007466 56995 Hs.486993 NM_020245 ENSG00000130338 TULP4 TUSP TUB like protein 4 protein-coding chr22-163 chr22 37752627 37752837 + 31.7 0.000 intron (NM_001039141, intron 12 of 23) intron (NM_001039141, intron 12 of 23) 6498 NM_007032 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr5-618 chr5 79319123 79319333 + 31.7 0.000 intron (NM_152405, intron 10 of 10) intron (NM_152405, intron 10 of 10) 83097 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr6-59 chr6 18155311 18155521 + 31.7 0.000 promoter-TSS (NM_153042) promoter-TSS (NM_153042) -6 NM_153042 221656 Hs.709336 NM_153042 ENSG00000165097 KDM1B AOF1|C6orf193|LSD2 lysine demethylase 1B protein-coding chr12-69 chr12 131894314 131894524 + 31.7 0.000 promoter-TSS (NM_003565) promoter-TSS (NM_003565) -203 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr10-338 chr10 131946400 131946610 + 31.7 0.000 intron (NM_018461, intron 7 of 8) intron (NM_018461, intron 7 of 8) 35508 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr11-397 chr11 2420706 2420916 + 31.7 0.000 intron (NM_014555, intron 3 of 23) intron (NM_014555, intron 3 of 23) 2234 NM_014555 29850 Hs.272287 NM_014555 ENSG00000070985 TRPM5 LTRPC5|MTR1 transient receptor potential cation channel subfamily M member 5 protein-coding chr6-231 chr6 136288776 136288986 + 31.7 0.000 intron (NM_001363659, intron 1 of 11) intron (NM_001363659, intron 1 of 11) 965 NM_001301038 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr14-200 chr14 68951074 68951284 + 31.7 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 28123 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr10-408 chr10 109430228 109430438 + 31.7 0.000 Intergenic Intergenic 492913 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr2-422 chr2 3575122 3575332 + 31.7 0.000 promoter-TSS (NM_001011) promoter-TSS (NM_001011) -33 NM_001011 6201 Hs.534346 NM_001011 ENSG00000171863 RPS7 DBA8|S7|eS7 ribosomal protein S7 protein-coding chr22-150 chr22 42857014 42857224 + 31.7 0.000 exon (NM_014570, exon 1 of 16) exon (NM_014570, exon 1 of 16) 154 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr1-401 chr1 38138609 38138819 + 31.7 0.000 Intergenic Intergenic 49483 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr10-313 chr10 34721324 34721534 + 31.7 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 93867 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr17-365 chr17 5468850 5469060 + 31.7 0.000 promoter-TSS (NM_020162) promoter-TSS (NM_020162) 27 NM_001199699 56919 Hs.250456 NM_020162 ENSG00000005100 DHX33 DDX33 DEAH-box helicase 33 protein-coding chr1-184 chr1 37946181 37946391 + 31.7 0.000 non-coding (NR_158628, exon 2 of 25) non-coding (NR_158628, exon 2 of 25) 583 NM_001365820 3633 Hs.449942 NM_005540 ENSG00000204084 INPP5B 5PTase inositol polyphosphate-5-phosphatase B protein-coding chr12-161 chr12 124500694 124500904 + 31.7 0.000 intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 66813 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr12-386 chr12 42757005 42757215 + 31.7 0.000 Intergenic Intergenic 64894 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr8-353 chr8 94739872 94740082 + 31.7 0.000 intron (NM_181787, intron 6 of 18) MLT1E2|LTR|ERVL-MaLR 20077 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr6-241 chr6 129501510 129501720 + 31.7 0.000 intron (NM_000426, intron 58 of 64) intron (NM_000426, intron 58 of 64) 208562 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr8-46 chr8 143368627 143368837 + 31.7 0.000 promoter-TSS (NM_052924) promoter-TSS (NM_052924) -97 NR_026785 78998 Hs.245886 NM_024035 ENSG00000254389 RHPN1-AS1 C8orf51 RHPN1 antisense RNA 1 (head to head) ncRNA chr2-563 chr2 85853049 85853259 + 31.7 0.000 5' UTR (NM_001354248, exon 1 of 6) 5' UTR (NM_001354248, exon 1 of 6) 1017 NM_001354248 8869 Hs.415117 NM_003896 ENSG00000115525 ST3GAL5 SATI|SIAT9|SIATGM3S|SPDRS|ST3Gal V|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding chr16-197 chr16 58630388 58630598 + 31.7 0.000 promoter-TSS (NM_001265612) promoter-TSS (NM_001265612) -667 NM_016284 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr2-316 chr2 231597314 231597524 + 31.7 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 4555 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr16-199 chr16 721134 721344 + 31.7 0.000 promoter-TSS (NM_001271285) promoter-TSS (NM_001271285) 93 NM_023933 65990 Hs.166244 NM_023933 ENSG00000103254 FAM173A C16orf24 family with sequence similarity 173 member A protein-coding chr1-418 chr1 28643012 28643222 + 31.7 0.000 promoter-TSS (NR_146731) promoter-TSS (NR_146731) -50 NM_001135218 6883 Hs.530251 NM_005644 ENSG00000120656 TAF12 TAF2J|TAFII20 TATA-box binding protein associated factor 12 protein-coding chr19-514 chr19 2271741 2271951 + 31.7 0.000 exon (NM_001301020, exon 3 of 5) exon (NM_001301020, exon 3 of 5) 2360 NM_001301020 4946 Hs.446427 NM_004152 ENSG00000104904 OAZ1 AZ1|AZI|OAZ ornithine decarboxylase antizyme 1 protein-coding chr7-111 chr7 2631708 2631918 + 31.7 0.000 promoter-TSS (NM_025250) promoter-TSS (NM_025250) -173 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr11-211 chr11 95789574 95789784 + 31.7 0.000 promoter-TSS (NM_001363604) promoter-TSS (NM_001363604) 103 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr3-249 chr3 138079125 138079335 + 31.6 0.000 intron (NM_001170538, intron 11 of 13) intron (NM_001170538, intron 11 of 13) 34250 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr7-342 chr7 13991373 13991583 + 31.6 0.000 promoter-TSS (NR_120445) promoter-TSS (NR_120445) -53 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr3-542 chr3 49500898 49501108 + 31.6 0.000 intron (NM_001177641, intron 2 of 3) intron (NM_001177641, intron 2 of 3) 30871 NM_001177640 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr7-284 chr7 100852557 100852767 + 31.6 0.000 promoter-TSS (NM_001267812) promoter-TSS (NM_001267812) -48 NR_146550 105375430 Hs.638778 NR_146550 ENSG00000236305 SLC12A9-AS1 - SLC12A9 antisense RNA 1 ncRNA chr7-262 chr7 45978324 45978534 + 31.6 0.000 Intergenic Intergenic -57157 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr13-22 chr13 27620523 27620733 + 31.6 0.000 promoter-TSS (NM_001206559) promoter-TSS (NM_001206559) -99 NM_153371 222484 Hs.132359 NM_153371 ENSG00000139517 LNX2 PDZRN1 ligand of numb-protein X 2 protein-coding chr15-139 chr15 63504441 63504651 + 31.6 0.000 promoter-TSS (NR_046341) promoter-TSS (NR_046341) 35 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr3-234 chr3 111978732 111978942 + 31.6 0.000 promoter-TSS (NR_073570) promoter-TSS (NR_073570) -189 NR_073570 55347 Hs.477115 NM_018394 ENSG00000144827 ABHD10 - abhydrolase domain containing 10 protein-coding chr12-239 chr12 31728938 31729148 + 31.6 0.000 promoter-TSS (NM_001113402) promoter-TSS (NM_001113402) -22 NM_001113402 196394 Hs.585084 NM_001113402 ENSG00000151743 AMN1 - antagonist of mitotic exit network 1 homolog protein-coding chr19-223 chr19 18281697 18281907 + 31.6 0.000 promoter-TSS (NM_001286968) promoter-TSS (NM_001286968) -180 NM_001286968 3727 Hs.2780 NM_005354 ENSG00000130522 JUND AP-1 JunD proto-oncogene, AP-1 transcription factor subunit protein-coding chr9-491 chr9 36102448 36102658 + 31.6 0.000 intron (NM_021111, intron 12 of 20) intron (NM_021111, intron 12 of 20) -33983 NR_104641 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr9-558 chr9 32644802 32645012 + 31.6 0.000 Intergenic Intergenic -9238 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr3-117 chr3 197749633 197749843 + 31.6 0.000 promoter-TSS (NM_032288) promoter-TSS (NM_032288) -39 NM_001145642 9711 Hs.478868 NM_014687 ENSG00000145016 RUBCN KIAA0226|RUBICON|SCAR15 rubicon autophagy regulator protein-coding chr8-137 chr8 145002939 145003149 + 31.6 0.000 promoter-TSS (NR_023392) promoter-TSS (NR_023392) -145 NR_023392 286101 Hs.367856 NR_023392 ZNF252P ZNF252 zinc finger protein 252, pseudogene pseudo chr17-744 chr17 14471069 14471279 + 31.6 0.000 Intergenic Intergenic 167434 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr17-437 chr17 21402349 21402559 + 31.6 0.000 intron (NM_021012, intron 1 of 2) intron (NM_021012, intron 1 of 2) 26097 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr4-88 chr4 987061 987271 + 31.6 0.000 TTS (NM_022042) TTS (NM_022042) 122 NM_000203 3425 Hs.89560 NM_000203 ENSG00000127415 IDUA IDA|MPS1 iduronidase alpha-L- protein-coding chr17-447 chr17 45102572 45102782 + 31.6 0.000 intron (NM_021079, intron 8 of 11) intron (NM_021079, intron 8 of 11) 11756 NR_106842 102465470 NR_106842 ENSG00000277249 MIR6784 hsa-mir-6784 microRNA 6784 ncRNA chr19-299 chr19 17391001 17391211 + 31.6 0.000 Intergenic CpG -13764 NM_031310 83483 Hs.107125 NM_031310 ENSG00000130300 PLVAP DIAR10|FELS|PV-1|PV1|gp68 plasmalemma vesicle associated protein protein-coding chr2-559 chr2 43159024 43159234 + 31.6 0.000 Intergenic Intergenic -56684 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chr10-226 chr10 103908398 103908608 + 31.6 0.000 intron (NM_024928, intron 3 of 9) intron (NM_024928, intron 3 of 9) 9681 NM_024928 79991 Hs.62314 NM_024928 ENSG00000107960 STN1 AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2 STN1 subunit of CST complex protein-coding chr8-112 chr8 118256890 118257100 + 31.6 0.000 intron (NM_001101676, intron 4 of 4) intron (NM_001101676, intron 4 of 4) -145176 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr22-254 chr22 24402509 24402719 + 31.6 0.000 intron (NM_001254732, intron 13 of 14) intron (NM_001254732, intron 13 of 14) -20983 NM_001278500 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chr15-57 chr15 75640166 75640376 + 31.6 0.000 promoter-TSS (NM_018285) promoter-TSS (NM_018285) 52 NM_018285 55272 Hs.513043 NM_018285 ENSG00000177971 IMP3 BRMS2|C15orf12|MRPS4 IMP U3 small nucleolar ribonucleoprotein 3 protein-coding chr4-195 chr4 113468379 113468589 + 31.6 0.000 intron (NM_001221, intron 14 of 18) intron (NM_001221, intron 14 of 18) 175645 NM_001354279 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr21-61 chr21 45364185 45364395 + 31.6 0.000 Intergenic Intergenic -22300 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chr3-262 chr3 14472863 14473073 + 31.6 0.000 intron (NR_103507, intron 9 of 13) intron (NR_103507, intron 9 of 13) 67374 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chr1-463 chr1 53889774 53889984 + 31.6 0.000 promoter-TSS (NR_036640) promoter-TSS (NR_036640) -82 NR_036639 54432 Hs.11923 NM_018982 ENSG00000058799 YIPF1 DJ167A19.1|FinGER1 Yip1 domain family member 1 protein-coding chr17-225 chr17 795051 795261 + 31.6 0.000 Intergenic Intergenic 12803 NM_001317947 55178 Hs.182729 NM_018146 ENSG00000171861 MRM3 RMTL1|RNMTL1 mitochondrial rRNA methyltransferase 3 protein-coding chr12-347 chr12 94262369 94262579 + 31.6 0.000 promoter-TSS (NR_037687) promoter-TSS (NR_037687) -47 NR_037687 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr5-263 chr5 95669635 95669845 + 31.6 0.000 intron (NR_125330, intron 2 of 7) intron (NR_125330, intron 2 of 7) 13251 NR_125330 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr16-297 chr16 11851342 11851552 + 31.6 0.000 promoter-TSS (NM_015659) promoter-TSS (NM_015659) 95 NM_015659 26156 Hs.401842 NM_015659 ENSG00000171490 RSL1D1 CSIG|L12|PBK1|UTP30 ribosomal L1 domain containing 1 protein-coding chr1-1136 chr1 203645097 203645307 + 31.6 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 17265 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr18-142 chr18 58541822 58542032 + 31.5 0.000 intron (NM_052947, intron 4 of 12) intron (NM_052947, intron 4 of 12) -58693 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr5-321 chr5 52727780 52727990 + 31.5 0.000 Intergenic Intergenic -60031 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr11-163 chr11 64358931 64359141 + 31.5 0.000 promoter-TSS (NM_001300802) promoter-TSS (NM_001300802) -126 NM_003942 8986 Hs.105584 NM_003942 ENSG00000162302 RPS6KA4 MSK2|RSK-B|S6K-alpha-4 ribosomal protein S6 kinase A4 protein-coding chr3-258 chr3 10263925 10264135 + 31.5 0.000 intron (NM_014760, intron 3 of 7) HAL1|LINE|L1 15571 NM_014760 9797 Hs.475401 NM_014760 ENSG00000157014 TATDN2 - TatD DNase domain containing 2 protein-coding chr16-273 chr16 2532609 2532819 + 31.5 0.000 promoter-TSS (NR_036139) promoter-TSS (NR_036139) -709 NR_036139 100422974 NR_036139 ENSG00000266232 MIR3178 mir-3178 microRNA 3178 ncRNA chr8-67 chr8 49233994 49234204 + 31.5 0.000 Intergenic Intergenic 161755 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr19-373 chr19 531422 531632 + 31.5 0.000 promoter-TSS (NM_004359) promoter-TSS (NM_004359) -233 NM_004359 997 Hs.514997 NM_004359 ENSG00000099804 CDC34 E2-CDC34|UBC3|UBCH3|UBE2R1 cell division cycle 34 protein-coding chr17-381 chr17 31094707 31094917 + 31.5 0.000 promoter-TSS (NR_039886) promoter-TSS (NR_039886) -115 NM_001042492 4763 Hs.113577 NM_000267 ENSG00000196712 NF1 NFNS|VRNF|WSS neurofibromin 1 protein-coding chr2-336 chr2 219362645 219362855 + 31.5 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 24612 NM_001319118 23549 Hs.258551 NM_012100 ENSG00000123992 DNPEP ASPEP|DAP aspartyl aminopeptidase protein-coding chr18-18 chr18 36828946 36829156 + 31.5 0.000 promoter-TSS (NR_148565) promoter-TSS (NR_148565) -49 NM_015476 25941 Hs.436636 NM_015476 ENSG00000134779 TPGS2 C18orf10|HMFN0601|L17|PGs2 tubulin polyglutamylase complex subunit 2 protein-coding chr7-461 chr7 28037291 28037501 + 31.5 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -143061 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr20-52 chr20 41317733 41317943 + 31.5 0.000 Intergenic CpG -17718 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr20-112 chr20 62652324 62652534 + 31.5 0.000 intron (NM_016354, intron 1 of 11) intron (NM_016354, intron 1 of 11) 9926 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chr1-368 chr1 197902678 197902888 + 31.5 0.000 exon (NM_001024594, exon 1 of 3) exon (NM_001024594, exon 1 of 3) 153 NM_001024594 388722 Hs.61329 NM_001024594 ENSG00000203724 C1orf53 - chromosome 1 open reading frame 53 protein-coding chr17-419 chr17 60577264 60577474 + 31.5 0.000 intron (NR_126009, intron 3 of 3) L1M4|LINE|L1 12823 NR_126009 388406 Hs.368309 NR_126009 ENSG00000267772 LINC01999 - long intergenic non-protein coding RNA 1999 ncRNA chr4-124 chr4 5710969 5711179 + 31.5 0.000 promoter-TSS (NM_001306092) promoter-TSS (NM_001306092) -127 NM_001306092 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr14-233 chr14 103131052 103131262 + 31.5 0.000 intron (NM_001371220, intron 7 of 12) intron (NM_001371220, intron 7 of 12) 4851 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr21-54 chr21 44845911 44846121 + 31.5 0.000 Intergenic Intergenic 27674 NM_004339 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF PTTG1 interacting protein protein-coding chrX-88 chrX 48003907 48004117 + 31.5 0.000 promoter-TSS (NM_205856) promoter-TSS (NM_205856) -23 NM_001007088 7569 Hs.189690 NM_006962 ENSG00000147118 ZNF182 HHZ150|KOX14|ZNF21|Zfp182 zinc finger protein 182 protein-coding chr1-318 chr1 174159283 174159493 + 31.5 0.000 promoter-TSS (NR_158982) promoter-TSS (NR_158982) -26 NM_014857 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr12-204 chr12 38316570 38316780 + 31.5 0.000 promoter-TSS (NM_001308340) promoter-TSS (NM_001308340) -99 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr2-209 chr2 218568358 218568568 + 31.5 0.000 promoter-TSS (NM_005444) promoter-TSS (NM_005444) -112 NM_020935 57695 Hs.166068 NM_020935 ENSG00000135913 USP37 - ubiquitin specific peptidase 37 protein-coding chr1-731 chr1 245822993 245823203 + 31.5 0.000 intron (NM_022743, intron 10 of 11) intron (NM_022743, intron 10 of 11) -588581 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr1-461 chr1 33007303 33007513 + 31.5 0.000 TTS (NM_001319139) TTS (NM_001319139) 29475 NM_001199199 204 Hs.470907 NM_001625 ENSG00000004455 AK2 ADK2 adenylate kinase 2 protein-coding chr3-348 chr3 57803744 57803954 + 31.5 0.000 intron (NM_001304420, intron 1 of 21) intron (NM_001304420, intron 1 of 21) 46593 NM_007159 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr3-141 chr3 42581937 42582147 + 31.5 0.000 promoter-TSS (NM_032970) promoter-TSS (NM_032970) -75 NM_001201584 9117 Hs.445892 NM_004206 ENSG00000093183 SEC22C SEC22L3 SEC22 homolog C, vesicle trafficking protein protein-coding chr4-66 chr4 1011460 1011670 + 31.5 0.000 promoter-TSS (NM_001004356) promoter-TSS (NM_001004356) -61 NM_001004356 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr11-359 chr11 69939829 69940039 + 31.5 0.000 Intergenic Intergenic -120518 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr2-170 chr2 99337274 99337484 + 31.5 0.000 promoter-TSS (NM_015904) promoter-TSS (NM_015904) -10 NM_015904 9669 Hs.158688 NM_015904 ENSG00000158417 EIF5B IF2 eukaryotic translation initiation factor 5B protein-coding chr9-350 chr9 113188087 113188297 + 31.5 0.000 intron (NM_015258, intron 13 of 27) intron (NM_015258, intron 13 of 27) 33085 NM_015258 23307 Hs.522351 NM_015258 ENSG00000119321 FKBP15 FKBP133|KIAA0674|PPP1R76 FKBP prolyl isomerase 15 protein-coding chr1-314 chr1 8873634 8873844 + 31.5 0.000 intron (NM_001353346, intron 2 of 11) G-rich|Low_complexity|Low_complexity 4947 NM_001201483 2023 Hs.517145 NM_001428 ENSG00000074800 ENO1 ENO1L1|HEL-S-17|MPB1|NNE|PPH enolase 1 protein-coding chr12-164 chr12 55729708 55729918 + 31.5 0.000 promoter-TSS (NM_001267698) promoter-TSS (NM_001267698) -140 NM_001257389 967 Hs.445570 NM_001780 ENSG00000135404 CD63 LAMP-3|ME491|MLA1|OMA81H|TSPAN30 CD63 molecule protein-coding chr13-129 chr13 95355675 95355885 + 31.5 0.000 Intergenic Intergenic -54329 NM_001105515 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr18-42 chr18 13726583 13726793 + 31.5 0.000 promoter-TSS (NM_001098801) promoter-TSS (NM_001098801) 15 NM_001308263 8731 Hs.592347 NM_003799 ENSG00000101654 RNMT CMT1|CMT1c|MET|Met|RG7MT1|cm1p|hCMT1|hMet RNA guanine-7 methyltransferase protein-coding chr9-683 chr9 36276979 36277189 + 31.5 0.000 promoter-TSS (NM_001128227) promoter-TSS (NM_001128227) -28 NM_001190388 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding chr19-390 chr19 35717628 35717838 + 31.5 0.000 promoter-TSS (NM_014727) promoter-TSS (NM_014727) -286 NM_014727 9757 Hs.92236 NM_014727 ENSG00000272333 KMT2B CXXC10|DYT28|HRX2|MLL1B|MLL2|MLL4|TRX2|WBP-7|WBP7 lysine methyltransferase 2B protein-coding chr3-321 chr3 124283388 124283598 + 31.5 0.000 intron (NM_001024660, intron 5 of 59) intron (NM_001024660, intron 5 of 59) -90839 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr5-180 chr5 151718785 151718995 + 31.5 0.000 Intergenic Intergenic -31975 NM_003118 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr3-216 chr3 139389636 139389846 + 31.5 0.000 promoter-TSS (NM_004766) promoter-TSS (NM_004766) -61 NR_023350 9276 Hs.681616 NM_004766 ENSG00000184432 COPB2 MCPH19|beta'-COP coatomer protein complex subunit beta 2 protein-coding chr15-167 chr15 58387193 58387403 + 31.5 0.000 Intergenic LTR40c|LTR|ERVL -44693 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr17-293 chr17 81040296 81040506 + 31.5 0.000 intron (NM_001144888, intron 1 of 13) intron (NM_001144888, intron 1 of 13) 5250 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding chr9-513 chr9 34222085 34222295 + 31.5 0.000 intron (NM_001171202, intron 2 of 5) intron (NM_001171202, intron 2 of 5) 43147 NM_016525 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr1-823 chr1 155983505 155983715 + 31.5 0.000 Intergenic Intergenic -4050 NM_001350112 9181 Hs.743352 NM_004723 ENSG00000116584 ARHGEF2 GEF|GEF-H1|GEFH1|LFP40|NEDMHM|P40 Rho/Rac guanine nucleotide exchange factor 2 protein-coding chr5-222 chr5 119070896 119071106 + 31.5 0.000 promoter-TSS (NM_001290322) promoter-TSS (NM_001290322) -54 NM_001349240 1657 Hs.181042 NM_005509 ENSG00000172869 DMXL1 - Dmx like 1 protein-coding chr2-779 chr2 84991770 84991980 + 31.5 0.000 intron (NM_020122, intron 1 of 6) MIR3|SINE|MIR 20714 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr6-205 chr6 158161028 158161238 + 31.5 0.000 intron (NM_032861, intron 1 of 16) AluJo|SINE|Alu 7129 NM_032861 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr18-9 chr18 12947790 12948000 + 31.5 0.000 promoter-TSS (NM_001013437) promoter-TSS (NM_001013437) -89 NM_031216 81929 Hs.301048 NM_031216 ENSG00000085415 SEH1L SEC13L|SEH1A|SEH1B|Seh1 SEH1 like nucleoporin protein-coding chr9-248 chr9 134068548 134068758 + 31.5 0.000 promoter-TSS (NM_007371) promoter-TSS (NM_007371) -627 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr22-215 chr22 19066626 19066836 + 31.5 0.000 intron (NR_033674, intron 2 of 8) intron (NR_033674, intron 2 of 8) -18356 NR_024157 25786 Hs.720269 NR_024157 ENSG00000273311 DGCR11 DGS-D DiGeorge syndrome critical region gene 11 ncRNA chr12-87 chr12 123972731 123972941 + 31.5 0.000 promoter-TSS (NM_025140) promoter-TSS (NM_025140) -5 NM_001304957 80212 Hs.114111 NM_025140 ENSG00000119242 CCDC92 - coiled-coil domain containing 92 protein-coding chr19-613 chr19 39428568 39428778 + 31.5 0.000 TTS (NM_001351693) TTS (NM_001351693) 7276 NM_001321111 6217 Hs.397609 NM_001020 ENSG00000105193 RPS16 S16 ribosomal protein S16 protein-coding chr9-145 chr9 34523079 34523289 + 31.5 0.000 promoter-TSS (NM_198573) promoter-TSS (NM_198573) -194 NM_198573 375704 Hs.522085 NM_198573 ENSG00000168913 ENHO C9orf165|UNQ470 energy homeostasis associated protein-coding chr10-220 chr10 69866705 69866915 + 31.5 0.000 intron (NM_001368898, intron 3 of 33) intron (NM_001368898, intron 3 of 33) 64904 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr12-184 chr12 50400761 50400971 + 31.5 0.000 promoter-TSS (NM_001352322) promoter-TSS (NM_001352322) -19 NM_001352310 113251 Hs.26613 NM_052879 ENSG00000161813 LARP4 PP13296 La ribonucleoprotein domain family member 4 protein-coding chr17-443 chr17 5420131 5420341 + 31.5 0.000 promoter-TSS (NM_001320653) promoter-TSS (NM_001320653) -497 NM_001320653 4927 Hs.584784 NM_002532 ENSG00000108559 NUP88 FADS4 nucleoporin 88 protein-coding chr3-214 chr3 48241071 48241281 + 31.5 0.000 promoter-TSS (NM_016089) promoter-TSS (NM_016089) 72 NM_016089 51385 Hs.172602 NM_016089 ENSG00000164048 ZNF589 SZF1 zinc finger protein 589 protein-coding chr12-281 chr12 10716761 10716971 + 31.3 0.000 intron (NM_001145426, intron 3 of 8) intron (NM_001145426, intron 3 of 8) 6457 NM_003651 8531 Hs.221889 NM_003651 ENSG00000060138 YBX3 CSDA|CSDA1|DBPA|ZONAB Y-box binding protein 3 protein-coding chr6-91 chr6 26457913 26458123 + 31.3 0.000 promoter-TSS (NM_078476) promoter-TSS (NM_078476) 63 NM_078476 11120 Hs.159028 NM_007049 ENSG00000112763 BTN2A1 BK14H9.1|BT2.1|BTF1|BTN2.1|DJ3E1.1 butyrophilin subfamily 2 member A1 protein-coding chr11-333 chr11 65111724 65111934 + 31.3 0.000 promoter-TSS (NM_001277233) promoter-TSS (NM_001277233) -25 NM_001277233 7108 Hs.31130 NM_003273 ENSG00000149809 TM7SF2 ANG1|C14SR|DHCR14A|NET47 transmembrane 7 superfamily member 2 protein-coding chr5-294 chr5 956911 957121 + 31.3 0.000 Intergenic Intergenic 40324 NR_104615 100506688 Hs.532063 NM_001242737 ENSG00000215246 LOC100506688 - uncharacterized LOC100506688 ncRNA chr10-324 chr10 29784558 29784768 + 31.3 0.000 Intergenic Intergenic -47727 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr4-366 chr4 169254095 169254305 + 31.3 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 16756 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr17-206 chr17 851055 851265 + 31.3 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 12951 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr1-612 chr1 32107885 32108095 + 31.3 0.000 promoter-TSS (NM_012316) promoter-TSS (NM_012316) -66 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr5-406 chr5 17157970 17158180 + 31.3 0.000 intron (NR_027253, intron 2 of 2) intron (NR_027253, intron 2 of 2) -2083 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr4-150 chr4 7911297 7911507 + 31.3 0.000 intron (NM_001371091, intron 1 of 17) intron (NM_001371091, intron 1 of 17) -27599 NM_203423 389199 Hs.375210 NM_203423 LOC389199 - uncharacterized LOC389199 protein-coding chr11-396 chr11 124954058 124954268 + 31.3 0.000 promoter-TSS (NM_025004) promoter-TSS (NM_025004) -39 NM_025004 80071 Hs.287555 NM_025004 ENSG00000149548 CCDC15 - coiled-coil domain containing 15 protein-coding chr10-215 chr10 101032930 101033140 + 31.3 0.000 intron (NM_030971, intron 2 of 11) intron (NM_030971, intron 2 of 11) 1796 NM_030971 81855 Hs.283844 NM_030971 ENSG00000107819 SFXN3 BA108L7.2|SFX3|SLC56A3 sideroflexin 3 protein-coding chr17-491 chr17 17446139 17446349 + 31.3 0.000 Intergenic Intergenic -30756 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr6-149 chr6 41895423 41895633 + 31.3 0.000 promoter-TSS (NM_018561) promoter-TSS (NM_018561) -153 NM_018561 25862 Hs.593575 NM_018561 ENSG00000164663 USP49 - ubiquitin specific peptidase 49 protein-coding chrX-49 chrX 65035356 65035566 + 31.3 0.000 promoter-TSS (NM_001178032) promoter-TSS (NM_001178032) -720 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr12-273 chr12 71664260 71664470 + 31.3 0.000 promoter-TSS (NM_031435) promoter-TSS (NM_031435) 64 NM_031435 83591 Hs.245798 NM_031435 ENSG00000173451 THAP2 - THAP domain containing 2 protein-coding chr1-1229 chr1 37958728 37958938 + 31.3 0.000 intron (NM_006802, intron 16 of 16) intron (NM_006802, intron 16 of 16) -11776 NM_001365824 3633 Hs.449942 NM_005540 ENSG00000204084 INPP5B 5PTase inositol polyphosphate-5-phosphatase B protein-coding chr9-237 chr9 75890607 75890817 + 31.3 0.000 promoter-TSS (NM_001190482) promoter-TSS (NM_001190482) 39 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr6-101 chr6 33711699 33711909 + 31.3 0.000 promoter-TSS (NM_032340) promoter-TSS (NM_032340) -104 NM_032340 84300 Hs.732448 NM_032340 ENSG00000137288 UQCC2 C6orf125|C6orf126|Cbp6|M19|MC3DN7|MNF1|bA6B20.2 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding KN196487.1-2 KN196487.1 1199 1409 + 31.3 0.000 NA NA NA NA chr16-170 chr16 90077363 90077573 + 31.3 0.000 Intergenic CpG -1538 NM_001098173 11105 Hs.406695 NM_052996 ENSG00000126856 PRDM7 PFM4|ZNF910 PR/SET domain 7 protein-coding chr16-88 chr16 87392108 87392318 + 31.3 0.000 promoter-TSS (NM_022818) promoter-TSS (NM_022818) -92 NM_001282683 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr10-185 chr10 38094226 38094436 + 31.3 0.000 promoter-TSS (NM_001324259) promoter-TSS (NM_001324259) -5 NM_001007094 7587 Hs.292575 NM_003421 ENSG00000075407 ZNF37A KOX21|ZNF37 zinc finger protein 37A protein-coding chr1-568 chr1 84506342 84506552 + 31.3 0.000 promoter-TSS (NM_001310156) promoter-TSS (NM_001310156) 61 NM_001310156 100505741 Hs.584956 NM_022354 ENSG00000122432 SPATA1 SP-2|SPAP1 spermatogenesis associated 1 protein-coding chr19-546 chr19 47920206 47920416 + 31.3 0.000 Intergenic L1MC4|LINE|L1 1882 NR_004436 100126799 Hs.723085 NR_004436 SNAR-A2 SNAR-A53129250 small NF90 (ILF3) associated RNA A2 snRNA chr17-469 chr17 50882910 50883120 + 31.3 0.000 Intergenic Intergenic -15037 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr17-253 chr17 50560603 50560813 + 31.3 0.000 promoter-TSS (NM_001256328) promoter-TSS (NM_001256328) -7 NM_001256361 8913 Hs.591169 NM_018896 ENSG00000006283 CACNA1G Ca(V)T.1|Cav3.1|NBR13|SCA42|SCA42ND calcium voltage-gated channel subunit alpha1 G protein-coding chr6-137 chr6 154734101 154734311 + 31.3 0.000 intron (NM_014892, intron 1 of 19) CpG 828 NM_001286188 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr11-134 chr11 66466663 66466873 + 31.3 0.000 promoter-TSS (NM_145065) promoter-TSS (NM_145065) -97 NM_001098510 246330 Hs.656875 NM_145065 ENSG00000174516 PELI3 - pellino E3 ubiquitin protein ligase family member 3 protein-coding chr19-793 chr19 16279262 16279472 + 31.3 0.000 Intergenic (ATTTG)n|Simple_repeat|Simple_repeat -45459 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr9-885 chr9 114277478 114277688 + 31.3 0.000 intron (NM_032888, intron 37 of 60) intron (NM_032888, intron 37 of 60) -45440 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr1-547 chr1 234553504 234553714 + 31.3 0.000 Intergenic Intergenic -21830 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr19-475 chr19 45406411 45406621 + 31.3 0.000 promoter-TSS (NM_001297590) promoter-TSS (NM_001297590) -128 NM_001297590 10849 Hs.710495 NM_012099 ENSG00000117877 CD3EAP ASE-1|ASE1|CAST|PAF49 CD3e molecule associated protein protein-coding chr14-96 chr14 55051477 55051687 + 31.3 0.000 promoter-TSS (NM_144578) promoter-TSS (NM_144578) -65 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding chr11-348 chr11 61962824 61963034 + 31.3 0.000 exon (NM_001139443, exon 9 of 9) exon (NM_001139443, exon 9 of 9) 4705 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr9-417 chr9 35657833 35658043 + 31.3 0.000 promoter-TSS (NM_174923) promoter-TSS (NM_174923) 80 NR_003051 6023 Hs.587502 NR_003051 ENSG00000269900 RMRP CHH|NME1|RMRPR|RRP2 RNA component of mitochondrial RNA processing endoribonuclease ncRNA chr16-240 chr16 2205499 2205709 + 31.3 0.000 non-coding (NR_147907, exon 1 of 8) non-coding (NR_147907, exon 1 of 8) 150 NR_147905 64223 Hs.29203 NM_022372 ENSG00000167965 MLST8 GBL|GbetaL|LST8|POP3|WAT1 MTOR associated protein, LST8 homolog protein-coding chr19-442 chr19 6039665 6039875 + 31.3 0.000 intron (NM_000635, intron 5 of 17) MIRb|SINE|MIR 61367 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA chr22-222 chr22 37592501 37592711 + 31.3 0.000 Intergenic AluSx3|SINE|Alu -12519 NM_006498 3957 Hs.531776 NM_006498 ENSG00000100079 LGALS2 HL14 galectin 2 protein-coding GL000225.1-3 GL000225.1 50788 50998 + 31.3 0.000 NA NA NA NA chr1-332 chr1 46340750 46340960 + 31.3 0.000 promoter-TSS (NM_001256128) promoter-TSS (NM_001256128) -323 NM_001256127 387338 Hs.163424 NM_199044 ENSG00000117481 NSUN4 SHTAP NOP2/Sun RNA methyltransferase 4 protein-coding chr2-221 chr2 218607642 218607852 + 31.3 0.000 promoter-TSS (NM_032726) promoter-TSS (NM_032726) -152 NM_032726 84812 Hs.632528 NM_032726 ENSG00000115556 PLCD4 - phospholipase C delta 4 protein-coding chr1-601 chr1 91022122 91022332 + 31.3 0.000 promoter-TSS (NM_016620) promoter-TSS (NM_016620) 28 NM_032186 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding chr3-388 chr3 47347279 47347489 + 31.3 0.000 TTS (NM_025010) TTS (NM_025010) -33637 NM_015466 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr12-99 chr12 63843769 63843979 + 31.3 0.000 promoter-TSS (NM_020762) promoter-TSS (NM_020762) -826 NM_001346201 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr22-184 chr22 20206340 20206550 + 31.3 0.000 non-coding (NR_026919, exon 1 of 1) non-coding (NR_026919, exon 1 of 1) 113 NR_026919 150197 Hs.635544 NM_152508 ENSG00000236499 LINC00896 - long intergenic non-protein coding RNA 896 ncRNA chr3-591 chr3 65889416 65889626 + 31.2 0.000 intron (NR_145422, intron 2 of 2) intron (NR_145422, intron 2 of 2) -4295 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr7-232 chr7 149460685 149460895 + 31.2 0.000 intron (NM_015694, intron 1 of 5) CpG 272 NM_015694 27153 Hs.38512 NM_015694 ENSG00000196453 ZNF777 - zinc finger protein 777 protein-coding chr16-417 chr16 30634245 30634455 + 31.2 0.000 Intergenic Intergenic -16428 NM_001320464 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 - proline rich 14 protein-coding chr8-255 chr8 68383555 68383765 + 31.2 0.000 intron (NR_146187, intron 1 of 13) intron (NR_146187, intron 1 of 13) -52169 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr1-490 chr1 1362142 1362352 + 31.2 0.000 promoter-TSS (NM_001282583) promoter-TSS (NM_001282583) -448 NM_001282583 54587 Hs.515687 NM_032348 ENSG00000162576 MXRA8 ASP3 matrix remodeling associated 8 protein-coding chr20-245 chr20 60063108 60063318 + 31.2 0.000 intron (NR_161293, intron 2 of 3) intron (NR_161293, intron 2 of 3) 7288 NR_161291 284756 Hs.335319 NR_126504 ENSG00000176659 C20orf197 - chromosome 20 open reading frame 197 ncRNA chr2-529 chr2 72561991 72562201 + 31.2 0.000 intron (NR_135774, intron 7 of 19) intron (NR_135774, intron 7 of 19) 263937 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr17-522 chr17 75078717 75078927 + 31.2 0.000 Intergenic Intergenic -8943 NM_001271765 9121 Hs.592095 NM_004695 ENSG00000170190 SLC16A5 MCT5|MCT6 solute carrier family 16 member 5 protein-coding chr5-573 chr5 110478939 110479149 + 31.2 0.000 intron (NM_001039763, intron 12 of 13) intron (NM_001039763, intron 12 of 13) 34871 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr2-379 chr2 205706919 205707129 + 31.2 0.000 intron (NM_018534, intron 2 of 15) intron (NM_018534, intron 2 of 15) 24523 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr2-733 chr2 108556610 108556820 + 31.2 0.000 intron (NM_001193483, intron 1 of 9) LTR3B|LTR|ERVK 22360 NM_001193483 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr17-274 chr17 81553130 81553340 + 31.2 0.000 promoter-TSS (NM_025161) promoter-TSS (NM_025161) -882 NM_025161 80233 Hs.313905 NM_025161 ENSG00000185504 FAAP100 C17orf70 FA core complex associated protein 100 protein-coding chr20-201 chr20 57212570 57212780 + 31.2 0.000 intron (NM_001719, intron 2 of 6) intron (NM_001719, intron 2 of 6) -1021 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr1-444 chr1 45491233 45491443 + 31.2 0.000 promoter-TSS (NM_001320800) promoter-TSS (NM_001320800) -175 NM_007170 10420 Hs.591499 NM_007170 ENSG00000070759 TESK2 - testis associated actin remodelling kinase 2 protein-coding chr3-176 chr3 32781406 32781616 + 31.2 0.000 Intergenic CpG -36486 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr22-139 chr22 40951330 40951540 + 31.2 0.000 promoter-TSS (NM_014248) promoter-TSS (NM_014248) 57 NM_014248 9978 Hs.474949 NM_014248 ENSG00000100387 RBX1 BA554C12.1|RNF75|ROC1 ring-box 1 protein-coding chr16-228 chr16 88825406 88825616 + 31.2 0.000 intron (NM_001323544, intron 11 of 14) intron (NM_001323544, intron 11 of 14) -13583 NM_001030018 353 Hs.28914 NM_000485 ENSG00000198931 APRT AMP|APRTD adenine phosphoribosyltransferase protein-coding chr3-280 chr3 25713503 25713713 + 31.2 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -48669 NR_039644 100616477 NR_039644 ENSG00000283971 MIR4442 mir-4442 microRNA 4442 ncRNA chr2-546 chr2 112627466 112627676 + 31.2 0.000 Intergenic Intergenic 16609 NR_033871 400999 Hs.585221 NR_033871 FLJ42351 - uncharacterized LOC400999 ncRNA chr9-274 chr9 79764462 79764672 + 31.2 0.000 Intergenic Intergenic -59963 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr2-365 chr2 178112267 178112477 + 31.2 0.000 promoter-TSS (NM_152945) promoter-TSS (NM_152945) -65 NM_001365579 129831 Hs.377257 NM_152945 ENSG00000155636 RBM45 DRB1|RB-1 RNA binding motif protein 45 protein-coding chr10-159 chr10 92573904 92574114 + 31.2 0.000 promoter-TSS (NM_001322793) promoter-TSS (NM_001322793) 84 NM_004969 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr2-235 chr2 32063691 32063901 + 31.2 0.000 5' UTR (NM_199436, exon 1 of 16) 5' UTR (NM_199436, exon 1 of 16) 185 NM_199436 6683 Hs.468091 NM_014946 ENSG00000021574 SPAST ADPSP|FSP2|SPG4 spastin protein-coding chr6-487 chr6 11772492 11772702 + 31.2 0.000 intron (NM_001143948, intron 1 of 6) intron (NM_001143948, intron 1 of 6) 6450 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr16-271 chr16 85555030 85555240 + 31.2 0.000 Intergenic CpG -56274 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr12-317 chr12 56594182 56594392 + 31.2 0.000 3' UTR (NM_002898, exon 14 of 14) 3' UTR (NM_002898, exon 14 of 14) 36039 NM_001300905 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr1-574 chr1 222644105 222644315 + 31.2 0.000 promoter-TSS (NM_001324065) promoter-TSS (NM_001324065) -93 NM_001324065 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 MIA SH3 domain ER export factor 3 protein-coding chr7-477 chr7 137882316 137882526 + 31.2 0.000 exon (NM_194071, exon 11 of 12) exon (NM_194071, exon 11 of 12) -35557 NM_001321708 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr12-346 chr12 75330122 75330332 + 31.2 0.000 promoter-TSS (NM_001286547) promoter-TSS (NM_001286547) 97 NM_032606 84698 Hs.733835 NM_032606 ENSG00000180881 CAPS2 UG0636c06 calcyphosine 2 protein-coding chr7-231 chr7 122886594 122886804 + 31.2 0.000 promoter-TSS (NM_017954) promoter-TSS (NM_017954) 60 NM_001009571 93664 Hs.649459 NM_017954 ENSG00000081803 CADPS2 CAPS2 calcium dependent secretion activator 2 protein-coding chr10-489 chr10 70833171 70833381 + 31.2 0.000 intron (NM_003901, intron 2 of 14) intron (NM_003901, intron 2 of 14) 17328 NM_003901 8879 Hs.499984 NM_003901 ENSG00000166224 SGPL1 NPHS14|S1PL|SPL sphingosine-1-phosphate lyase 1 protein-coding chr17-393 chr17 35022742 35022952 + 31.2 0.000 intron (NR_037713, intron 2 of 6) intron (NR_037713, intron 2 of 6) 40860 NM_001017368 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr11-843 chr11 100876924 100877134 + 31.2 0.000 intron (NM_001367945, intron 6 of 25) intron (NM_001367945, intron 6 of 25) -57245 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr3-269 chr3 23916838 23917048 + 31.2 0.000 promoter-TSS (NM_001253383) promoter-TSS (NM_001253383) 103 NM_020345 28512 Hs.173202 NM_020345 ENSG00000197885 NKIRAS1 KBRAS1|kappaB-Ras1 NFKB inhibitor interacting Ras like 1 protein-coding chr19-705 chr19 52648549 52648759 + 31.2 0.000 intron (NM_001348018, intron 3 of 5) HERV3-int|LTR|ERV1 -10263 NM_001105549 55769 Hs.467210 NM_018300 ENSG00000167766 ZNF83 HPF1|ZNF816B zinc finger protein 83 protein-coding chr7-134 chr7 106112368 106112578 + 31.2 0.000 promoter-TSS (NM_182715) promoter-TSS (NM_182715) 103 NM_006754 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr9-178 chr9 132944640 132944850 + 31.1 0.000 promoter-TSS (NM_001162426) promoter-TSS (NM_001162426) -112 NM_000368 7248 Hs.370854 NM_000368 ENSG00000165699 TSC1 LAM|TSC TSC complex subunit 1 protein-coding chr1-228 chr1 229558943 229559153 + 31.1 0.000 promoter-TSS (NM_012089) promoter-TSS (NM_012089) -341 NM_012089 23456 Hs.17614 NM_012089 ENSG00000135776 ABCB10 EST20237|M-ABC2|MTABC2 ATP binding cassette subfamily B member 10 protein-coding chr9-451 chr9 75039137 75039347 + 31.1 0.000 Intergenic Intergenic -10812 NR_135282 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding chr9-351 chr9 123131251 123131461 + 31.1 0.000 intron (NR_033234, intron 17 of 18) L2c|LINE|L2 -15879 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chr19-498 chr19 52734942 52735152 + 31.1 0.000 promoter-TSS (NM_001161501) promoter-TSS (NM_001161501) -3 NM_001161501 81856 Hs.143951 NM_030972 ENSG00000213020 ZNF611 - zinc finger protein 611 protein-coding chr6-305 chr6 142902784 142902994 + 31.1 0.000 intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 42287 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr12-247 chr12 124024368 124024578 + 31.1 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 51258 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr12-391 chr12 82608856 82609066 + 31.1 0.000 Intergenic Intergenic -77945 NM_152588 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr12-261 chr12 82358567 82358777 + 31.1 0.000 promoter-TSS (NM_014167) promoter-TSS (NM_014167) 133 NR_033192 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr7-369 chr7 100035220 100035430 + 31.1 0.000 non-coding (NR_144477, exon 7 of 7) non-coding (NR_144477, exon 7 of 7) -14449 NM_001362781 7589 Hs.632294 NM_145914 ENSG00000166529 ZSCAN21 NY-REN-21|ZNF38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding chr1-525 chr1 111739329 111739539 + 31.1 0.000 promoter-TSS (NR_038951) promoter-TSS (NR_038951) -39 NM_019099 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr2-659 chr2 71831132 71831342 + 31.1 0.000 Intergenic Intergenic 316625 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr11-838 chr11 78801321 78801531 + 31.1 0.000 intron (NM_001098816, intron 15 of 33) intron (NM_001098816, intron 15 of 33) -226562 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr18-135 chr18 9877159 9877369 + 31.1 0.000 Intergenic LTR45C|LTR|ERV1 -8709 NM_032243 84203 Hs.98712 NM_032243 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 protein-coding chrX-89 chrX 71301544 71301754 + 31.1 0.000 promoter-TSS (NM_001303277) promoter-TSS (NM_001303277) -101 NM_001303277 26548 Hs.109999 NM_012278 ENSG00000147166 ITGB1BP2 CHORDC3|ITGB1BP|MELUSIN|MSTP015 integrin subunit beta 1 binding protein 2 protein-coding chr6-290 chr6 85403587 85403797 + 31.1 0.000 intron (NR_134633, intron 2 of 3) intron (NR_134633, intron 2 of 3) 1110 NR_134633 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr8-73 chr8 688245 688455 + 31.1 0.000 intron (NR_156467, intron 3 of 5) (CCCCG)n|Simple_repeat|Simple_repeat 42874 NM_207332 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chr19-509 chr19 49590120 49590330 + 31.1 0.000 promoter-TSS (NM_020719) promoter-TSS (NM_020719) -957 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding chr11-425 chr11 8604324 8604534 + 31.1 0.000 Intergenic L2a|LINE|L2 -10201 NM_001352392 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr8-88 chr8 51899047 51899257 + 31.1 0.000 promoter-TSS (NM_052937) promoter-TSS (NM_052937) 34 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr19-367 chr19 2456951 2457161 + 31.1 0.000 promoter-TSS (NM_032737) promoter-TSS (NM_032737) -97 NM_032737 84823 Hs.538286 NM_032737 ENSG00000176619 LMNB2 EPM9|LAMB2|LMN2 lamin B2 protein-coding chr9-514 chr9 69376674 69376884 + 31.1 0.000 intron (NM_001127608, intron 4 of 10) intron (NM_001127608, intron 4 of 10) 47454 NM_004816 9413 Hs.118003 NM_004816 ENSG00000135063 FAM189A2 C9orf61|X123 family with sequence similarity 189 member A2 protein-coding chr17-287 chr17 30731647 30731857 + 31.1 0.000 intron (NR_144394, intron 1 of 8) CpG 22144 NR_144394 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr8-159 chr8 30540073 30540283 + 31.1 0.000 intron (NM_001008710, intron 5 of 8) L2b|LINE|L2 -98402 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr1-549 chr1 966883 967093 + 31.1 0.000 intron (NM_001367552, intron 2 of 15) CpG-23 506 NM_001367552 84069 Hs.528691 NM_032129 ENSG00000187583 PLEKHN1 CLPABP pleckstrin homology domain containing N1 protein-coding chr5-331 chr5 131610322 131610532 + 31.1 0.000 intron (NM_016340, intron 1 of 27) ERV3-16A3_I-int|LTR|ERVL 24802 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr22-258 chr22 18001546 18001756 + 31.1 0.000 intron (NM_015241, intron 1 of 31) CpG -20690 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chr2-222 chr2 26244695 26244905 + 31.1 0.000 promoter-TSS (NM_001281513) promoter-TSS (NM_001281513) 52 NM_001281512 3032 Hs.515848 NM_000183 ENSG00000138029 HADHB ECHB|MSTP029|MTPB|TP-BETA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta protein-coding chr8-199 chr8 122489710 122489920 + 31.1 0.000 intron (NR_131202, intron 2 of 3) intron (NR_131202, intron 2 of 3) 78829 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr10-780 chr10 36802956 36803166 + 31.1 0.000 Intergenic Intergenic -322796 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr17-233 chr17 51260172 51260382 + 31.1 0.000 promoter-TSS (NM_016001) promoter-TSS (NM_016001) -228 NM_017643 54799 Hs.656803 NM_017643 ENSG00000011258 MBTD1 SA49P01 mbt domain containing 1 protein-coding chr16-333 chr16 70707141 70707351 + 31.1 0.000 intron (NM_001351157, intron 13 of 17) intron (NM_001351157, intron 13 of 17) -21193 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr11-550 chr11 131000414 131000624 + 31.1 0.000 Intergenic MER58A|DNA|hAT-Charlie -84032 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr3-375 chr3 113166967 113167177 + 31.1 0.000 intron (NR_110823, intron 1 of 3) intron (NR_110823, intron 1 of 3) 659 NR_110823 101929717 Hs.638426 NR_110823 ENSG00000243795 LINC02044 - long intergenic non-protein coding RNA 2044 ncRNA chr19-524 chr19 18416914 18417124 + 31.1 0.000 Intergenic CpG -2379 NM_001009998 170463 Hs.515259 NM_032627 ENSG00000130511 SSBP4 - single stranded DNA binding protein 4 protein-coding chr10-292 chr10 29535452 29535662 + 31.1 0.000 intron (NM_021738, intron 7 of 37) intron (NM_021738, intron 7 of 37) 9540 NR_030335 693189 NR_030335 ENSG00000207612 MIR604 MIRN604|hsa-mir-604 microRNA 604 ncRNA chr18-102 chr18 46155664 46155874 + 31.1 0.000 Intergenic Intergenic -18253 NM_001008239 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr4-164 chr4 153541493 153541703 + 31.1 0.000 intron (NM_001131007, intron 3 of 34) L2|LINE|L2 75238 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr9-631 chr9 110156959 110157169 + 31.1 0.000 intron (NM_147150, intron 9 of 9) intron (NM_147150, intron 9 of 9) 31563 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr15-141 chr15 78930987 78931197 + 31.0 0.000 intron (NM_001319137, intron 8 of 12) intron (NM_001319137, intron 8 of 12) 14006 NM_004390 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr3-434 chr3 161890154 161890364 + 31.0 0.000 Intergenic LTR28B|LTR|ERV1 393451 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr17-454 chr17 1787634 1787844 + 31.0 0.000 intron (NM_052928, intron 5 of 10) intron (NM_052928, intron 5 of 10) 16068 NM_001329905 5176 Hs.532768 NM_002615 ENSG00000132386 SERPINF1 EPC-1|OI12|OI6|PEDF|PIG35 serpin family F member 1 protein-coding chr12-425 chr12 12820077 12820287 + 31.0 0.000 intron (NM_201224, intron 2 of 10) intron (NM_201224, intron 2 of 10) 6836 NM_201224 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr8-232 chr8 30436594 30436804 + 31.0 0.000 intron (NM_001008710, intron 1 of 8) intron (NM_001008710, intron 1 of 8) -51298 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr1-642 chr1 9163847 9164057 + 31.0 0.000 intron (NR_132742, intron 1 of 1) intron (NR_132742, intron 1 of 1) -12175 NR_029610 407040 NR_029610 ENSG00000284357 MIR34A MIRN34A|miRNA34A|mir-34|mir-34a microRNA 34a ncRNA chr22-177 chr22 37546157 37546367 + 31.0 0.000 Intergenic Intergenic -14218 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr19-248 chr19 39031497 39031707 + 31.0 0.000 intron (NM_178820, intron 2 of 5) intron (NM_178820, intron 2 of 5) 947 NM_178820 126433 Hs.187461 NM_178820 ENSG00000161243 FBXO27 FBG5|Fbx27 F-box protein 27 protein-coding chr8-146 chr8 127899554 127899764 + 31.0 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 49064 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr4-596 chr4 119103387 119103597 + 31.0 0.000 Intergenic MIRc|SINE|MIR -32292 NM_016599 51778 Hs.732122 NM_016599 ENSG00000172399 MYOZ2 C4orf5|CMH16|CS-1|FATZ-2 myozenin 2 protein-coding chr12-308 chr12 100200718 100200928 + 31.0 0.000 promoter-TSS (NR_048568) promoter-TSS (NR_048568) 8 NR_048568 64431 Hs.115088 NM_022496 ENSG00000075089 ACTR6 ARP6|CDA12|HSPC281|MSTP136|hARP6|hARPX actin related protein 6 protein-coding chr6-222 chr6 711265 711475 + 31.0 0.000 Intergenic Intergenic -18229 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr1-811 chr1 43330208 43330418 + 31.0 0.000 Intergenic Intergenic -7491 NM_005373 4352 Hs.82906 NM_005373 ENSG00000117400 MPL C-MPL|CD110|MPLV|THCYT2|THPOR|TPOR MPL proto-oncogene, thrombopoietin receptor protein-coding chr4-148 chr4 8393715 8393925 + 31.0 0.000 intron (NM_003501, intron 10 of 17) intron (NM_003501, intron 10 of 17) 46903 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr19-372 chr19 56404042 56404252 + 31.0 0.000 promoter-TSS (NM_001159861) promoter-TSS (NM_001159861) 133 NM_001159860 147949 Hs.146854 NM_152478 ENSG00000198440 ZNF583 - zinc finger protein 583 protein-coding chr20-48 chr20 2873379 2873589 + 31.0 0.000 promoter-TSS (NM_080840) promoter-TSS (NM_080840) -12 NM_080840 5786 Hs.269577 NM_002836 ENSG00000132670 PTPRA HEPTP|HLPR|HPTPA|HPTPalpha|LRP|PTPA|PTPRL2|R-PTP-alpha|RPTPA protein tyrosine phosphatase receptor type A protein-coding chr18-78 chr18 45803056 45803266 + 31.0 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -22514 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr19-590 chr19 12666535 12666745 + 31.0 0.000 promoter-TSS (NR_029375) promoter-TSS (NR_029375) 102 NM_000528 4125 Hs.356769 NM_000528 ENSG00000104774 MAN2B1 LAMAN|MANB mannosidase alpha class 2B member 1 protein-coding KI270744.1-1 KI270744.1 111953 112163 + 31.0 0.000 NA NA NA NA chr19-413 chr19 21836121 21836331 + 31.0 0.000 promoter-TSS (NM_001256654) promoter-TSS (NM_001256654) -44 NM_003423 7594 Hs.534365 NM_003423 ENSG00000198521 ZNF43 HTF6|KOX27|ZNF39L1 zinc finger protein 43 protein-coding chr11-304 chr11 35082359 35082569 + 31.0 0.000 Intergenic Intergenic 55568 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr2-837 chr2 196823871 196824081 + 31.0 0.000 Intergenic Intergenic -13700 NM_213608 401027 Hs.245666 NM_213608 ENSG00000187944 C2orf66 IIDS6411|UNQ6411 chromosome 2 open reading frame 66 protein-coding chr3-153 chr3 184017973 184018183 + 31.0 0.000 promoter-TSS (NM_005688) promoter-TSS (NM_005688) -194 NM_001320032 10057 Hs.368563 NM_005688 ENSG00000114770 ABCC5 ABC33|EST277145|MOAT-C|MOATC|MRP5|SMRP|pABC11 ATP binding cassette subfamily C member 5 protein-coding chr6-125 chr6 3697665 3697875 + 31.0 0.000 Intergenic Intergenic 54242 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr7-305 chr7 101017542 101017752 + 31.0 0.000 promoter-TSS (NR_120519) promoter-TSS (NR_120519) -39 NR_120520 102724094 Hs.571256 NR_120519 ENSG00000227053 LOC102724094 - uncharacterized LOC102724094 ncRNA chr16-547 chr16 57194659 57194869 + 31.0 0.000 intron (NM_001305163, intron 1 of 14) intron (NM_001305163, intron 1 of 14) 8435 NM_133368 89970 Hs.460885 NM_133368 ENSG00000159579 RSPRY1 SEMDFA ring finger and SPRY domain containing 1 protein-coding chr1-530 chr1 156741149 156741359 + 31.0 0.000 promoter-TSS (NM_024540) promoter-TSS (NM_024540) -166 NM_145729 79590 Hs.418233 NM_024540 ENSG00000143314 MRPL24 L24mt|MRP-L18|MRP-L24 mitochondrial ribosomal protein L24 protein-coding chr3-401 chr3 112676924 112677134 + 31.0 0.000 Intergenic Intergenic -35886 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr17-462 chr17 80279910 80280120 + 31.0 0.000 intron (NM_020954, intron 3 of 16) intron (NM_020954, intron 3 of 16) 19163 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr4-419 chr4 169115905 169116115 + 31.0 0.000 intron (NM_020870, intron 10 of 11) L2b|LINE|L2 -105755 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr10-423 chr10 125113904 125114114 + 31.0 0.000 intron (NM_001083914, intron 1 of 10) intron (NM_001083914, intron 1 of 10) 44768 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr3-558 chr3 170346839 170347049 + 31.0 0.000 Intergenic Intergenic -10771 NM_001145098 6498 Hs.536655 NM_005414 ENSG00000136603 SKIL SNO|SnoA|SnoI|SnoN SKI like proto-oncogene protein-coding chr5-379 chr5 153959558 153959768 + 31.0 0.000 Intergenic Intergenic -60676 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr11-168 chr11 65558225 65558435 + 31.0 0.000 promoter-TSS (NM_021070) promoter-TSS (NM_021070) -102 NM_001164266 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr2-384 chr2 79723905 79724115 + 31.0 0.000 intron (NM_001282598, intron 2 of 17) intron (NM_001282598, intron 2 of 17) -74651 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA chr4-352 chr4 40255519 40255729 + 31.0 0.000 Intergenic Intergenic -51561 NR_121641 101060498 Hs.351492 NR_121640 ENSG00000249241 LINC02265 - long intergenic non-protein coding RNA 2265 ncRNA chr5-91 chr5 415584 415794 + 30.9 0.000 intron (NM_020731, intron 5 of 11) intron (NM_020731, intron 5 of 11) 27471 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr3-197 chr3 183884911 183885121 + 30.9 0.000 promoter-TSS (NR_136893) promoter-TSS (NR_136893) -136 NR_136893 55486 Hs.478469 NM_018622 ENSG00000175193 PARL PRO2207|PSARL|PSARL1|PSENIP2|RHBDS1 presenilin associated rhomboid like protein-coding chr1-675 chr1 94947484 94947694 + 30.9 0.000 intron (NR_033998, intron 2 of 3) intron (NR_033998, intron 2 of 3) 19561 NR_033998 729970 Hs.297988 NR_033998 ENSG00000235501 LOC729970 - hCG2028352-like ncRNA chr8-264 chr8 144014637 144014847 + 30.9 0.000 intron (NM_198572, intron 1 of 4) intron (NM_198572, intron 1 of 4) 2462 NM_001134374 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr5-230 chr5 132265728 132265938 + 30.9 0.000 intron (NM_001131027, intron 2 of 5) intron (NM_001131027, intron 2 of 5) 8137 NM_003687 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr22-186 chr22 39405435 39405645 + 30.9 0.000 intron (NM_153497, intron 1 of 10) intron (NM_153497, intron 1 of 10) 5760 NM_153497 10454 Hs.507681 NM_006116 ENSG00000100324 TAB1 3'-Tab1|MAP3K7IP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 protein-coding chr7-219 chr7 105652430 105652640 + 30.9 0.000 intron (NM_001318229, intron 3 of 9) intron (NM_001318229, intron 3 of 9) 26620 NM_001318229 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr19-383 chr19 32580940 32581150 + 30.9 0.000 promoter-TSS (NM_004708) promoter-TSS (NM_004708) -145 NM_004708 9141 Hs.443831 NM_004708 ENSG00000105185 PDCD5 TFAR19 programmed cell death 5 protein-coding chr1-535 chr1 240612085 240612295 + 30.9 0.000 promoter-TSS (NM_022469) promoter-TSS (NM_022469) -35 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr9-730 chr9 123069213 123069423 + 30.9 0.000 intron (NM_012197, intron 14 of 25) intron (NM_012197, intron 14 of 25) 35675 NM_005294 2844 Hs.722039 NM_005294 ENSG00000011454 GPR21 - G protein-coupled receptor 21 protein-coding chr9-304 chr9 15307048 15307258 + 30.9 0.000 exon (NM_152574, exon 1 of 20) exon (NM_152574, exon 1 of 20) 207 NM_001168341 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr11-616 chr11 5621345 5621555 + 30.9 0.000 intron (NM_001003827, intron 1 of 7) intron (NM_001003827, intron 1 of 7) 1506 NM_001003827 53840 Hs.729048 NM_021616 ENSG00000258659 TRIM34 IFP1|RNF21 tripartite motif containing 34 protein-coding chr16-282 chr16 84583006 84583216 + 30.9 0.000 intron (NM_021149, intron 3 of 3) MIR|SINE|MIR 34967 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr3-373 chr3 104359551 104359761 + 30.9 0.000 Intergenic Intergenic -835540 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr17-402 chr17 31937005 31937215 + 30.9 0.000 5' UTR (NM_015355, exon 1 of 16) 5' UTR (NM_015355, exon 1 of 16) 103 NM_015355 23512 Hs.462732 NM_015355 ENSG00000178691 SUZ12 CHET9|JJAZ1 SUZ12 polycomb repressive complex 2 subunit protein-coding chr1-504 chr1 247210779 247210989 + 30.9 0.000 Intergenic CpG -8824 NR_037480 100500849 NR_037480 ENSG00000283881 MIR3916 mir-3916 microRNA 3916 ncRNA chr10-188 chr10 45672617 45672827 + 30.9 0.000 promoter-TSS (NM_001282905) promoter-TSS (NM_001282905) 10 NM_001282905 93550 Hs.89029 NM_174890 ENSG00000172671 ZFAND4 ANUBL1 zinc finger AN1-type containing 4 protein-coding chr3-173 chr3 127590819 127591029 + 30.9 0.000 promoter-TSS (NM_001353002) promoter-TSS (NM_001353002) -191 NM_001136053 131601 Hs.6418 NM_016372 ENSG00000163870 TPRA1 GPR175|TMEM227|TPRA40 transmembrane protein adipocyte associated 1 protein-coding chr1-606 chr1 245091889 245092099 + 30.9 0.000 intron (NM_001143943, intron 6 of 6) intron (NM_001143943, intron 6 of 6) -62991 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr2-373 chr2 63841632 63841842 + 30.9 0.000 promoter-TSS (NM_006759) promoter-TSS (NM_006759) -143 NM_006759 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr11-446 chr11 117316231 117316441 + 30.9 0.000 promoter-TSS (NM_012104) promoter-TSS (NM_012104) -80 NM_138972 23621 Hs.504003 NM_012104 ENSG00000186318 BACE1 ASP2|BACE|HSPC104 beta-secretase 1 protein-coding chr8-323 chr8 79288173 79288383 + 30.9 0.000 Intergenic MER50-int|LTR|ERV1 -43910 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA chr10-485 chr10 119199503 119199713 + 30.9 0.000 Intergenic Intergenic -7963 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr9-328 chr9 33107258 33107468 + 30.9 0.000 Intergenic Intergenic -1329 NR_162131 113219452 NR_162131 MIR12117 - microRNA 12117 ncRNA chr3-174 chr3 190120864 190121074 + 30.9 0.000 promoter-TSS (NR_126419) promoter-TSS (NR_126419) 5 NR_126419 101929152 NR_126419 ENSG00000225764 P3H2-AS1 LEPREL1-AS1 P3H2 antisense RNA 1 ncRNA chr7-183 chr7 92590178 92590388 + 30.9 0.000 promoter-TSS (NM_001288584) promoter-TSS (NM_001288584) 107 NM_001040057 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr11-755 chr11 123494838 123495048 + 30.9 0.000 intron (NM_001367419, intron 2 of 20) intron (NM_001367419, intron 2 of 20) -14973 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr3-356 chr3 42179496 42179706 + 30.9 0.000 intron (NM_001349247, intron 3 of 16) intron (NM_001349247, intron 3 of 16) 19408 NM_014965 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr11-409 chr11 66336485 66336695 + 30.9 0.000 promoter-TSS (NM_001363560) promoter-TSS (NM_001363560) -156 NM_004292 9610 Hs.1030 NM_004292 ENSG00000174791 RIN1 - Ras and Rab interactor 1 protein-coding chr1-796 chr1 198937321 198937531 + 30.9 0.000 promoter-TSS (NR_040073) promoter-TSS (NR_040073) 3 NR_040073 100131234 Hs.711077 NR_040073 MIR181A1HG - MIR181A1 host gene ncRNA chr20-137 chr20 37178194 37178404 + 30.9 0.000 promoter-TSS (NM_001324302) promoter-TSS (NM_001324302) -747 NM_001135771 6185 Hs.370895 NM_002951 ENSG00000118705 RPN2 RIBIIR|RPN-II|RPNII|SWP1 ribophorin II protein-coding chr4-244 chr4 140926708 140926918 + 30.8 0.000 intron (NM_020724, intron 4 of 6) intron (NM_020724, intron 4 of 6) -170428 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr17-168 chr17 1829820 1830030 + 30.8 0.000 promoter-TSS (NM_001355121) promoter-TSS (NM_001355121) -23 NM_052928 114826 Hs.514602 NM_052928 ENSG00000186532 SMYD4 ZMYND21 SET and MYND domain containing 4 protein-coding chr10-355 chr10 118692950 118693160 + 30.8 0.000 intron (NM_153810, intron 6 of 8) intron (NM_153810, intron 6 of 8) 61915 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr4-140 chr4 7022317 7022527 + 30.8 0.000 intron (NM_001286805, intron 10 of 11) intron (NM_001286805, intron 10 of 11) 20579 NM_153376 257236 Hs.656757 NM_153376 ENSG00000173013 CCDC96 - coiled-coil domain containing 96 protein-coding chr1-409 chr1 23019265 23019475 + 30.8 0.000 promoter-TSS (NM_001009999) promoter-TSS (NM_001009999) -98 NM_015013 23028 Hs.591518 NM_015013 ENSG00000004487 KDM1A AOF2|BHC110|CPRF|KDM1|LSD1 lysine demethylase 1A protein-coding chr4-155 chr4 107989611 107989821 + 30.8 0.000 promoter-TSS (NM_001184705) promoter-TSS (NM_001184705) 2 NM_001184705 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding chr15-217 chr15 48671448 48671658 + 30.8 0.000 Intergenic Intergenic -25765 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr3-232 chr3 47381344 47381554 + 30.8 0.000 intron (NM_015466, intron 1 of 24) CpG 428 NM_001304482 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr17-521 chr17 64506687 64506897 + 30.8 0.000 promoter-TSS (NR_133644) promoter-TSS (NR_133644) -61 NM_001320596 1655 Hs.279806 NM_004396 ENSG00000108654 DDX5 G17P1|HLR1|HUMP68|p68 DEAD-box helicase 5 protein-coding chr9-420 chr9 107274974 107275184 + 30.8 0.000 Intergenic L2a|LINE|L2 -8200 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr7-127 chr7 75994591 75994801 + 30.8 0.000 promoter-TSS (NM_001363462) promoter-TSS (NM_001363462) -101 NR_156695 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr2-676 chr2 9656410 9656620 + 30.8 0.000 Intergenic Intergenic -25518 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr21-66 chr21 39633934 39634144 + 30.8 0.000 intron (NM_001278650, intron 1 of 2) Charlie9|DNA|hAT-Charlie -8357 NM_001356339 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr16-305 chr16 53080712 53080922 + 30.8 0.000 intron (NM_025134, intron 1 of 38) intron (NM_025134, intron 1 of 38) 25826 NM_025134 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr20-70 chr20 25310474 25310684 + 30.8 0.000 intron (NM_001042472, intron 6 of 12) intron (NM_001042472, intron 6 of 12) 62494 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr2-187 chr2 189674448 189674658 + 30.8 0.000 Intergenic CpG -1432 NM_144708 150709 Hs.60772 NM_144708 ENSG00000151687 ANKAR - ankyrin and armadillo repeat containing protein-coding chr19-730 chr19 57935315 57935525 + 30.8 0.000 promoter-TSS (NM_001317030) promoter-TSS (NM_001317030) -18 NM_001317027 147686 Hs.660728 NM_133460 ENSG00000196724 ZNF418 - zinc finger protein 418 protein-coding chr1-648 chr1 27146045 27146255 + 30.8 0.000 intron (NM_003047, intron 1 of 11) intron (NM_003047, intron 1 of 11) 8975 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr17-342 chr17 2374811 2375021 + 30.8 0.000 intron (NM_001346700, intron 16 of 22) intron (NM_001346700, intron 16 of 22) 26144 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr2-181 chr2 231708323 231708533 + 30.8 0.000 promoter-TSS (NM_002823) promoter-TSS (NM_002823) -97 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr7-432 chr7 139775864 139776074 + 30.8 0.000 intron (NM_001113239, intron 1 of 14) intron (NM_001113239, intron 1 of 14) 2029 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr9-317 chr9 91433252 91433462 + 30.8 0.000 Intergenic MIR|SINE|MIR -8731 NM_001290000 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr4-109 chr4 83485022 83485232 + 30.8 0.000 promoter-TSS (NM_001345962) promoter-TSS (NM_001345962) -27 NM_001345962 84142 Hs.334772 NM_139076 ENSG00000163322 ABRAXAS1 ABRA1|CCDC98|FAM175A abraxas 1, BRCA1 A complex subunit protein-coding chr6-238 chr6 80128522 80128732 + 30.8 0.000 intron (NR_134945, intron 2 of 10) intron (NR_134945, intron 2 of 10) 21956 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr11-651 chr11 111631801 111632011 + 30.8 0.000 intron (NM_015191, intron 3 of 14) intron (NM_015191, intron 3 of 14) 29457 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr4-184 chr4 105708679 105708889 + 30.8 0.000 promoter-TSS (NM_024751) promoter-TSS (NM_024751) 0 NM_001370181 79807 Hs.161429 NM_024751 ENSG00000138780 GSTCD - glutathione S-transferase C-terminal domain containing protein-coding chr2-680 chr2 33210709 33210919 + 30.8 0.000 intron (NM_206943, intron 7 of 33) intron (NM_206943, intron 7 of 33) 76217 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr5-353 chr5 151459849 151460059 + 30.8 0.000 intron (NM_001308151, intron 2 of 8) intron (NM_001308151, intron 2 of 8) 12351 NM_001349740 206358 Hs.269004 NM_078483 ENSG00000123643 SLC36A1 Dct1|LYAAT1|PAT1|TRAMD3 solute carrier family 36 member 1 protein-coding KI270733.1-5 KI270733.1 173130 173340 + 30.8 0.000 NA NA NA NA chr18-32 chr18 57586596 57586806 + 30.8 0.000 promoter-TSS (NM_001012515) promoter-TSS (NM_001012515) 1 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr22-300 chr22 45302075 45302285 + 30.8 0.000 Intergenic L1ME1|LINE|L1 -6780 NR_146323 55007 Hs.265018 NM_017911 ENSG00000100376 FAM118A C22orf8 family with sequence similarity 118 member A protein-coding chr1-494 chr1 52056135 52056345 + 30.8 0.000 promoter-TSS (NR_046405) promoter-TSS (NR_046405) 55 NM_001136497 91408 Hs.429839 NM_152265 ENSG00000134717 BTF3L4 - basic transcription factor 3 like 4 protein-coding chr3-188 chr3 49021892 49022102 + 30.8 0.000 promoter-TSS (NM_018114) promoter-TSS (NM_018114) -124 NM_199069 25915 Hs.31387 NM_199069 ENSG00000178057 NDUFAF3 2P1|C3orf60|E3-3|MC1DN18 NADH:ubiquinone oxidoreductase complex assembly factor 3 protein-coding chr12-229 chr12 32679102 32679312 + 30.8 0.000 promoter-TSS (NM_012062) promoter-TSS (NM_012062) 7 NM_005690 10059 Hs.556296 NM_005690 ENSG00000087470 DNM1L DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5 dynamin 1 like protein-coding chr14-158 chr14 23078800 23079010 + 30.8 0.000 exon (NM_001164815, exon 6 of 18) exon (NM_001164815, exon 6 of 18) -7336 NM_001164816 22985 Hs.124490 NM_014977 ENSG00000100813 ACIN1 ACINUS|ACN|fSAP152 apoptotic chromatin condensation inducer 1 protein-coding chr11-225 chr11 10808943 10809153 + 30.8 0.000 promoter-TSS (NR_120540) promoter-TSS (NR_120540) -13 NM_001042559 1982 Hs.183684 NM_001418 ENSG00000110321 EIF4G2 AAG1|DAP5|NAT1|P97 eukaryotic translation initiation factor 4 gamma 2 protein-coding chr9-303 chr9 136881895 136882105 + 30.8 0.000 Intergenic Intergenic -4516 NM_021138 7186 Hs.522506 NM_021138 ENSG00000127191 TRAF2 MGC:45012|RNF117|TRAP|TRAP3 TNF receptor associated factor 2 protein-coding chr2-443 chr2 191377333 191377543 + 30.8 0.000 intron (NM_012223, intron 13 of 28) intron (NM_012223, intron 13 of 28) 132034 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr11-178 chr11 67630229 67630439 + 30.8 0.000 promoter-TSS (NM_001243750) promoter-TSS (NM_001243750) -397 NM_001243750 254552 Hs.433329 NM_181843 ENSG00000167799 NUDT8 - nudix hydrolase 8 protein-coding chr2-721 chr2 201860712 201860922 + 30.8 0.000 intron (NM_001366386, intron 10 of 13) intron (NM_001366386, intron 10 of 13) 54238 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr17-433 chr17 78040888 78041098 + 30.8 0.000 intron (NM_018996, intron 3 of 20) CpG 36756 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr10-187 chr10 13586754 13586964 + 30.8 0.000 promoter-TSS (NM_003675) promoter-TSS (NM_003675) -106 NM_003675 8559 Hs.660649 NM_003675 ENSG00000165630 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding chr2-260 chr2 108636394 108636604 + 30.8 0.000 intron (NM_001193484, intron 1 of 9) LTR41|LTR|ERVL 15248 NM_001193484 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr17-238 chr17 28357414 28357624 + 30.8 0.000 promoter-TSS (NM_015584) promoter-TSS (NM_015584) 8 NM_015584 26073 Hs.241543 NM_015584 ENSG00000004142 POLDIP2 PDIP38|POLD4|p38 DNA polymerase delta interacting protein 2 protein-coding chr22-353 chr22 36351103 36351313 + 30.8 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 36859 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr19-426 chr19 2602553 2602763 + 30.6 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -28057 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr3-279 chr3 19889204 19889414 + 30.6 0.000 intron (NM_001330688, intron 11 of 14) HERVL40-int|LTR|ERVL 44908 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding chr14-98 chr14 105352551 105352761 + 30.6 0.000 intron (NM_015197, intron 3 of 23) intron (NM_015197, intron 3 of 23) -37079 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr3-299 chr3 115975481 115975691 + 30.6 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) -70460 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr3-294 chr3 167735564 167735774 + 30.6 0.000 promoter-TSS (NM_145860) promoter-TSS (NM_145860) 25 NM_001122752 5274 Hs.478153 NM_005025 ENSG00000163536 SERPINI1 PI12|neuroserpin serpin family I member 1 protein-coding chrX-22 chrX 48891624 48891834 + 30.6 0.000 Intergenic CpG -6183 NM_144495 10084 Hs.534384 NM_005710 ENSG00000102103 PQBP1 MRX2|MRX55|MRXS3|MRXS8|NPW38|RENS1|SHS polyglutamine binding protein 1 protein-coding chr2-264 chr2 740528 740738 + 30.6 0.000 Intergenic Intergenic -63227 NM_001352680 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr7-194 chr7 105521773 105521983 + 30.6 0.000 intron (NM_019042, intron 1 of 15) CpG 393 NM_019042 54517 Hs.520619 NM_019042 ENSG00000091127 PUS7 IDDABS pseudouridine synthase 7 protein-coding chr4-108 chr4 83284567 83284777 + 30.6 0.000 exon (NM_001358921, exon 1 of 7) exon (NM_001358921, exon 1 of 7) 123 NM_001358921 27235 Hs.144304 NM_015697 ENSG00000173085 COQ2 CL640|COQ10D1|MSA1|PHB:PPT coenzyme Q2, polyprenyltransferase protein-coding chr2-540 chr2 36461366 36461576 + 30.6 0.000 intron (NM_016441, intron 4 of 16) intron (NM_016441, intron 4 of 16) 105693 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr1-724 chr1 205122309 205122519 + 30.6 0.000 promoter-TSS (NM_005057) promoter-TSS (NM_005057) -436 NM_005057 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr12-223 chr12 6534395 6534605 + 30.6 0.000 promoter-TSS (NM_001289746) promoter-TSS (NM_001289746) -17 NM_001289746 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding chr1-641 chr1 1013259 1013469 + 30.6 0.000 promoter-TSS (NM_005101) promoter-TSS (NM_005101) -133 NM_005101 9636 Hs.458485 NM_005101 ENSG00000187608 ISG15 G1P2|IFI15|IMD38|IP17|UCRP|hUCRP ISG15 ubiquitin like modifier protein-coding chr19-848 chr19 58387070 58387280 + 30.6 0.000 promoter-TSS (NM_001009) promoter-TSS (NM_001009) -94 NM_001009 6193 Hs.378103 NM_001009 ENSG00000083845 RPS5 S5 ribosomal protein S5 protein-coding chr9-238 chr9 126804974 126805184 + 30.6 0.000 promoter-TSS (NM_001135776) promoter-TSS (NM_001135776) 39 NM_014007 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr6-358 chr6 100633135 100633345 + 30.6 0.000 intron (NM_006828, intron 25 of 41) MER44C|DNA|TcMar-Tigger -169565 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr3-310 chr3 120417437 120417647 + 30.6 0.000 intron (NM_007085, intron 2 of 10) intron (NM_007085, intron 2 of 10) -21813 NR_029584 406975 NR_029584 ENSG00000284121 MIR198 MIRN198|miR-198 microRNA 198 ncRNA chr11-344 chr11 9663821 9664031 + 30.6 0.000 promoter-TSS (NM_001297714) promoter-TSS (NM_001297714) -151 NM_015055 23075 Hs.153026 NM_015055 ENSG00000133789 SWAP70 HSPC321|SWAP-70 switching B cell complex subunit SWAP70 protein-coding chr10-258 chr10 51937858 51938068 + 30.6 0.000 intron (NM_001098512, intron 5 of 17) MER44D|DNA|TcMar-Tigger -238368 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr12-220 chr12 57744902 57745112 + 30.6 0.000 promoter-TSS (NM_005981) promoter-TSS (NM_005981) -32 NM_001330169 6302 Hs.632708 NM_005981 ENSG00000135452 TSPAN31 SAS tetraspanin 31 protein-coding chr7-445 chr7 157150937 157151147 + 30.6 0.000 intron (NM_014671, intron 1 of 22) MLT1F|LTR|ERVL-MaLR 12116 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr9-280 chr9 35689740 35689950 + 30.6 0.000 promoter-TSS (NM_001301226) promoter-TSS (NM_001301226) 80 NM_001301226 7169 Hs.300772 NM_003289 ENSG00000198467 TPM2 AMCD1|DA1|DA2B|DA2B4|HEL-S-273|NEM4|TMSB tropomyosin 2 protein-coding chr10-468 chr10 33421832 33422042 + 30.6 0.000 Intergenic Intergenic -87032 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr14-134 chr14 73741542 73741752 + 30.6 0.000 intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) -17100 NR_039727 100616158 NR_039727 ENSG00000264741 MIR4505 mir-4505 microRNA 4505 ncRNA chr1-336 chr1 228082473 228082683 + 30.6 0.000 promoter-TSS (NM_001658) promoter-TSS (NM_001658) -82 NM_001024226 375 Hs.286221 NM_001658 ENSG00000143761 ARF1 PVNH8 ADP ribosylation factor 1 protein-coding chr5-206 chr5 150001766 150001976 + 30.6 0.000 intron (NM_014983, intron 1 of 19) intron (NM_014983, intron 1 of 19) 1132 NM_001366501 22993 Hs.719189 NM_014983 ENSG00000113716 HMGXB3 HMGX3|SMF HMG-box containing 3 protein-coding chr12-155 chr12 109462555 109462765 + 30.6 0.000 intron (NR_133898, intron 1 of 5) MER102b|DNA|hAT-Charlie 14640 NM_001317399 83892 Hs.524731 NM_031954 ENSG00000110906 KCTD10 BTBD28|MSTP028|ULRO61|hBACURD3 potassium channel tetramerization domain containing 10 protein-coding chr8-186 chr8 38295795 38296005 + 30.6 0.000 exon (NM_023034, exon 16 of 24) exon (NM_023034, exon 16 of 24) -26668 NM_001354454 84513 Hs.567619 NM_032483 ENSG00000147535 PLPP5 DPPL1|HTPAP|PPAPDC1B phospholipid phosphatase 5 protein-coding chr7-334 chr7 45111868 45112078 + 30.6 0.000 promoter-TSS (NM_004749) promoter-TSS (NM_004749) -226 NM_001261834 9238 Hs.231411 NM_004749 ENSG00000136270 TBRG4 CPR2|FASTKD4 transforming growth factor beta regulator 4 protein-coding chr9-408 chr9 70902689 70902899 + 30.6 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) -33742 NM_206944 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr5-204 chr5 6378469 6378679 + 30.6 0.000 promoter-TSS (NM_032286) promoter-TSS (NM_032286) -27 NM_032286 84246 Hs.13885 NM_032286 ENSG00000133398 MED10 L6|NUT2|TRG20 mediator complex subunit 10 protein-coding chrX-40 chrX 24054378 24054588 + 30.6 0.000 promoter-TSS (NM_001415) promoter-TSS (NM_001415) -473 NM_001415 1968 Hs.539684 NM_001415 ENSG00000130741 EIF2S3 EIF2|EIF2G|EIF2gamma|MEHMO|MRXSBRK|eIF-2gA eukaryotic translation initiation factor 2 subunit gamma protein-coding chr4-188 chr4 3122295 3122505 + 30.6 0.000 intron (NM_002111, intron 9 of 66) intron (NM_002111, intron 9 of 66) 47719 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr4-227 chr4 3904366 3904576 + 30.6 0.000 Intergenic Intergenic 50957 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr6-160 chr6 26402317 26402527 + 30.6 0.000 intron (NM_194441, intron 1 of 9) intron (NM_194441, intron 1 of 9) 147 NM_007048 11119 Hs.191510 NM_007048 ENSG00000026950 BTN3A1 BT3.1|BTF5|BTN3.1|CD277 butyrophilin subfamily 3 member A1 protein-coding chr6-315 chr6 116447620 116447830 + 30.6 0.000 Intergenic Intergenic -13650 NM_001276460 441168 Hs.381220 NM_001010919 ENSG00000188820 CALHM6 C6orf187|FAM26F|INAM|dJ93H18.5 calcium homeostasis modulator family member 6 protein-coding chr2-1367 chr2 9885312 9885522 + 30.6 0.000 intron (NM_001318977, intron 7 of 13) intron (NM_001318977, intron 7 of 13) 41943 NM_005680 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr11-577 chr11 119334264 119334474 + 30.6 0.000 promoter-TSS (NM_032015) promoter-TSS (NM_032015) -158 NM_032015 79102 Hs.524084 NM_032015 ENSG00000173456 RNF26 - ring finger protein 26 protein-coding chr9-262 chr9 91164774 91164984 + 30.6 0.000 intron (NR_135306, intron 2 of 2) intron (NR_135306, intron 2 of 2) 45817 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr3-287 chr3 111582081 111582291 + 30.6 0.000 intron (NM_001318889, intron 4 of 7) intron (NM_001318889, intron 4 of 7) 13160 NM_024508 79413 Hs.136912 NM_024508 ENSG00000177494 ZBED2 - zinc finger BED-type containing 2 protein-coding chr9-241 chr9 128702507 128702717 + 30.6 0.000 5' UTR (NM_001317926, exon 1 of 22) 5' UTR (NM_001317926, exon 1 of 22) 109 NM_001317926 29941 Hs.300485 NM_013355 ENSG00000160447 PKN3 UTDP4-1 protein kinase N3 protein-coding chr5-277 chr5 176537219 176537429 + 30.6 0.000 promoter-TSS (NM_014901) promoter-TSS (NM_014901) 78 NM_014901 22838 Hs.434888 NM_014901 ENSG00000146083 RNF44 - ring finger protein 44 protein-coding chr22-187 chr22 40310315 40310525 + 30.6 0.000 intron (NM_015088, intron 14 of 20) intron (NM_015088, intron 14 of 20) -36080 NM_001363840 158 Hs.75527 NM_000026 ENSG00000239900 ADSL AMPS|ASASE|ASL adenylosuccinate lyase protein-coding chr19-862 chr19 44448397 44448607 + 30.6 0.000 promoter-TSS (NM_014518) promoter-TSS (NM_014518) -30 NR_103551 7772 Hs.709348 NM_014518 ENSG00000278318 ZNF229 - zinc finger protein 229 protein-coding chr2-454 chr2 120729811 120730021 + 30.6 0.000 Intergenic Intergenic -5952 NM_001371271 chr9-586 chr9 5844846 5845056 + 30.6 0.000 Intergenic Intergenic -11834 NM_024896 79956 Hs.591078 NM_024896 ENSG00000099219 ERMP1 FXNA|KIAA1815|bA207C16.3 endoplasmic reticulum metallopeptidase 1 protein-coding chr5-549 chr5 17000416 17000626 + 30.6 0.000 Intergenic Intergenic -64233 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr12-512 chr12 88186061 88186271 + 30.5 0.000 intron (NM_181783, intron 10 of 13) intron (NM_181783, intron 10 of 13) 43859 NR_159381 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding chr17-435 chr17 2054539 2054749 + 30.5 0.000 promoter-TSS (NM_006497) promoter-TSS (NM_006497) -459 NM_006497 3090 Hs.72956 NM_006497 ENSG00000177374 HIC1 ZBTB29|ZNF901|hic-1 HIC ZBTB transcriptional repressor 1 protein-coding chr1-558 chr1 217631112 217631322 + 30.5 0.000 promoter-TSS (NM_018040) promoter-TSS (NM_018040) -127 NM_018040 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr7-343 chr7 44184729 44184939 + 30.5 0.000 intron (NM_001354800, intron 1 of 10) intron (NM_001354800, intron 1 of 10) 4605 NM_001354800 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr16-365 chr16 67857884 67858094 + 30.5 0.000 intron (NM_001322041, intron 1 of 4) L2a|LINE|L2 -10296 NM_025082 80152 Hs.288382 NM_025082 ENSG00000102901 CENPT C16orf56|CENP-T centromere protein T protein-coding chr2-416 chr2 202932879 202933089 + 30.5 0.000 intron (NM_001352677, intron 3 of 13) L1M2a|LINE|L1 20709 NM_024744 79800 Hs.444982 NM_024744 ENSG00000138380 CARF ALS2CR8|NYD-SP24 calcium responsive transcription factor protein-coding chr5-197 chr5 15501426 15501636 + 30.5 0.000 promoter-TSS (NM_001278317) promoter-TSS (NM_001278317) 93 NM_001278317 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr9-253 chr9 34637807 34638017 + 30.5 0.000 promoter-TSS (NM_001282206) promoter-TSS (NM_001282206) -86 NM_147157 10280 Hs.522087 NM_005866 ENSG00000147955 SIGMAR1 ALS16|DSMA2|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R sigma non-opioid intracellular receptor 1 protein-coding chr1-517 chr1 32992523 32992733 + 30.5 0.000 Intergenic Intergenic -27819 NM_001127361 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chr4-125 chr4 1683482 1683692 + 30.5 0.000 intron (NM_001174070, intron 1 of 4) intron (NM_001174070, intron 1 of 4) 404 NM_001013622 152877 Hs.143314 NM_001013622 ENSG00000174137 FAM53A DNTNP family with sequence similarity 53 member A protein-coding chr9-365 chr9 38681774 38681984 + 30.5 0.000 Intergenic Intergenic 60791 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr13-59 chr13 26253874 26254084 + 30.5 0.000 promoter-TSS (NM_001260) promoter-TSS (NM_001260) -150 NM_001260 1024 Hs.382306 NM_001260 ENSG00000132964 CDK8 K35 cyclin dependent kinase 8 protein-coding chr11-566 chr11 8826419 8826629 + 30.5 0.000 intron (NM_005418, intron 3 of 22) intron (NM_005418, intron 3 of 22) -15189 NM_139157 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr1-877 chr1 11158682 11158892 + 30.5 0.000 intron (NM_004958, intron 29 of 57) intron (NM_004958, intron 29 of 57) 14889 NR_046600 100873935 Hs.679133 NR_046600 ENSG00000225602 MTOR-AS1 - MTOR antisense RNA 1 ncRNA chr14-321 chr14 20613317 20613527 + 30.5 0.000 Intergenic tRNA-Pro-CCY|tRNA|tRNA -22599 NM_001024822 493901 Hs.729466 NM_001024822 ENSG00000258436 RNASE12 HEL-S-85p|RAI1 ribonuclease A family member 12 (inactive) protein-coding chr17-210 chr17 81034791 81035001 + 30.5 0.000 promoter-TSS (NM_017451) promoter-TSS (NM_017451) -177 NR_026857 440465 Hs.448889 NM_001004336 ENSG00000226137 BAIAP2-DT BAIAP2-AS1|lnc-BAIAP2 BAIAP2 divergent transcript ncRNA chr10-494 chr10 119006927 119007137 + 30.5 0.000 Intergenic Intergenic -22682 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr9-709 chr9 124078827 124079037 + 30.5 0.000 Intergenic Intergenic 67164 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr7-380 chr7 47535272 47535482 + 30.5 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 46734 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr7-394 chr7 105679191 105679401 + 30.5 0.000 promoter-TSS (NM_001318229) promoter-TSS (NM_001318229) -134 NM_138495 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr6-164 chr6 149648559 149648769 + 30.5 0.000 promoter-TSS (NM_007044) promoter-TSS (NM_007044) 50 NM_007044 11104 Hs.450175 NM_007044 ENSG00000186625 KATNA1 - katanin catalytic subunit A1 protein-coding chr7-821 chr7 31948088 31948298 + 30.5 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 122214 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr17-338 chr17 59842913 59843123 + 30.5 0.000 TTS (NM_001329399) TTS (NM_001329399) 1752 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr9-360 chr9 99368451 99368661 + 30.5 0.000 intron (NR_102271, intron 3 of 5) intron (NR_102271, intron 3 of 5) 6701 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr1-224 chr1 40449896 40450106 + 30.5 0.000 promoter-TSS (NM_023070) promoter-TSS (NM_023070) -63 NM_001369565 65243 Hs.133034 NM_023070 ENSG00000187801 ZFP69B ZKSCAN23B|ZNF643|ZSCAN54B ZFP69 zinc finger protein B protein-coding chr12-475 chr12 57888044 57888254 + 30.5 0.000 intron (NR_148947, intron 1 of 3) intron (NR_148947, intron 1 of 3) 8333 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr11-356 chr11 62560685 62560895 + 30.5 0.000 promoter-TSS (NR_037427) promoter-TSS (NR_037427) -484 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr11-299 chr11 32583781 32583991 + 30.5 0.000 promoter-TSS (NM_001307929) promoter-TSS (NM_001307929) 55 NM_006360 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr12-446 chr12 101018654 101018864 + 30.5 0.000 intron (NM_001286616, intron 7 of 26) intron (NM_001286616, intron 7 of 26) 117113 NM_001286616 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr19-669 chr19 49813544 49813754 + 30.5 0.000 promoter-TSS (NM_001352262) promoter-TSS (NM_001352262) -357 NM_001363663 80199 Hs.288800 NM_025129 ENSG00000010361 FUZ CPLANE3|FY|NTD fuzzy planar cell polarity protein protein-coding chr11-389 chr11 78079813 78080023 + 30.5 0.000 promoter-TSS (NM_004549) promoter-TSS (NM_004549) -56 NM_001203262 100532726 Hs.407860 NM_001203260 ENSG00000259112 NDUFC2-KCTD14 - NDUFC2-KCTD14 readthrough protein-coding chr7-308 chr7 813391 813601 + 30.5 0.000 Intergenic CpG -2061 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr4-268 chr4 2583649 2583859 + 30.5 0.000 intron (NM_001366318, intron 1 of 20) intron (NM_001366318, intron 1 of 20) -41678 NM_001256668 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr2-272 chr2 223613232 223613442 + 30.5 0.000 Intergenic Intergenic -10976 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr19-507 chr19 41262379 41262589 + 30.5 0.000 promoter-TSS (NM_144732) promoter-TSS (NM_144732) -73 NM_144732 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding chr8-378 chr8 117398860 117399070 + 30.5 0.000 Intergenic Intergenic -121748 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr12-236 chr12 56118057 56118267 + 30.5 0.000 promoter-TSS (NM_001303124) promoter-TSS (NM_001303124) -104 NM_032786 84872 Hs.632706 NM_032786 ENSG00000135482 ZC3H10 ZC3HDC10 zinc finger CCCH-type containing 10 protein-coding chr3-419 chr3 122786170 122786380 + 30.5 0.000 intron (NM_001320728, intron 1 of 6) intron (NM_001320728, intron 1 of 6) 7556 NM_001320728 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr22-124 chr22 28883290 28883500 + 30.5 0.000 promoter-TSS (NM_001206998) promoter-TSS (NM_001206998) -177 NM_001206998 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr12-147 chr12 68686668 68686878 + 30.5 0.000 promoter-TSS (NR_038930) promoter-TSS (NR_038930) 86 NR_038930 100507250 Hs.600731 NR_038930 ENSG00000247363 LOC100507250 - uncharacterized LOC100507250 ncRNA chr11-524 chr11 103433465 103433675 + 30.5 0.000 intron (NM_001377, intron 84 of 88) MLT1F2|LTR|ERVL-MaLR 324144 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr3-261 chr3 10115417 10115627 + 30.5 0.000 promoter-TSS (NM_018462) promoter-TSS (NM_018462) -153 NM_018462 55845 Hs.649307 NM_018462 ENSG00000254999 BRK1 C3orf10|HSPC300|MDS027|hHBrk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex protein-coding chr2-917 chr2 216478309 216478519 + 30.5 0.000 intron (NM_001127207, intron 17 of 17) intron (NM_001127207, intron 17 of 17) -20430 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr15-333 chr15 95247097 95247307 + 30.5 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 79898 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr6-350 chr6 162964903 162965113 + 30.5 0.000 intron (NM_001080379, intron 2 of 4) intron (NM_001080379, intron 2 of 4) 89153 NR_110872 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr5-148 chr5 317207 317417 + 30.5 0.000 intron (NM_020731, intron 1 of 11) intron (NM_020731, intron 1 of 11) 13136 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr11-216 chr11 74988876 74989086 + 30.5 0.000 promoter-TSS (NM_001367864) promoter-TSS (NM_001367864) 48 NM_001367862 10825 Hs.191074 NM_006656 ENSG00000162139 NEU3 SIAL3 neuraminidase 3 protein-coding chr2-200 chr2 24971754 24971964 + 30.5 0.000 promoter-TSS (NR_034113) promoter-TSS (NR_034113) 96 NM_016544 51277 Hs.434993 NM_016544 ENSG00000115137 DNAJC27 RBJ|RabJS DnaJ heat shock protein family (Hsp40) member C27 protein-coding chr17-187 chr17 81891727 81891937 + 30.5 0.000 promoter-TSS (NR_158770) promoter-TSS (NR_158770) -95 NM_001289416 51529 Hs.534456 NM_016476 ENSG00000141552 ANAPC11 APC11|Apc11p|HSPC214 anaphase promoting complex subunit 11 protein-coding chr11-349 chr11 63986234 63986444 + 30.4 0.000 non-coding (NR_003089, exon 1 of 6) non-coding (NR_003089, exon 1 of 6) 486 NM_017670 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr17-395 chr17 42798538 42798748 + 30.4 0.000 promoter-TSS (NM_001330222) promoter-TSS (NM_001330222) 61 NM_001040431 28958 Hs.16059 NM_001040431 ENSG00000183978 COA3 CCDC56|COX25|HSPC009|MITRAC12 cytochrome c oxidase assembly factor 3 protein-coding chr6-45 chr6 34249148 34249358 + 30.4 0.000 promoter-TSS (NM_178508) promoter-TSS (NM_178508) -145 NR_155741 221491 Hs.381300 NM_178508 ENSG00000186577 SMIM29 C6orf1|LBH small integral membrane protein 29 protein-coding chr8-225 chr8 29249972 29250182 + 30.4 0.000 intron (NM_015254, intron 1 of 39) intron (NM_015254, intron 1 of 39) 12993 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr9-195 chr9 129823974 129824184 + 30.4 0.000 promoter-TSS (NM_000113) promoter-TSS (NM_000113) 57 NM_000113 1861 Hs.534312 NM_000113 ENSG00000136827 TOR1A DQ2|DYT1 torsin family 1 member A protein-coding chr9-240 chr9 128456896 128457106 + 30.4 0.000 promoter-TSS (NM_153437) promoter-TSS (NM_153437) 94 NM_153437 4957 Hs.129055 NM_002540 ENSG00000136811 ODF2 CT134|ODF2/1|ODF2/2|ODF84 outer dense fiber of sperm tails 2 protein-coding chr2-227 chr2 73737273 73737483 + 30.4 0.000 promoter-TSS (NM_016058) promoter-TSS (NM_016058) 28 NM_001330392 51002 Hs.157401 NM_016058 ENSG00000144034 TPRKB CGI-121|CGI121|GAMOS5 TP53RK binding protein protein-coding chr17-568 chr17 17032112 17032322 + 30.4 0.000 Intergenic Intergenic -10240 NM_001364716 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr7-480 chr7 33987431 33987641 + 30.4 0.000 intron (NM_133468, intron 7 of 15) intron (NM_133468, intron 7 of 15) 81997 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr3-436 chr3 196632449 196632659 + 30.4 0.000 promoter-TSS (NR_132101) promoter-TSS (NR_132101) 33 NR_132101 101929769 Hs.518527 NR_132101 ENSG00000232065 LINC01063 - long intergenic non-protein coding RNA 1063 ncRNA chr14-101 chr14 104677871 104678081 + 30.4 0.000 promoter-TSS (NR_039860) promoter-TSS (NR_039860) -227 NR_039860 100616300 NR_039860 ENSG00000265291 MIR4710 mir-4710 microRNA 4710 ncRNA chr11-367 chr11 57637765 57637975 + 30.4 0.000 Intergenic Intergenic -3328 NR_029673 406919 NR_029673 ENSG00000208009 MIR130A MIRN130A|miRNA130A|mir-130a microRNA 130a ncRNA chr20-89 chr20 24672887 24673097 + 30.4 0.000 Intergenic Intergenic 203031 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr20-111 chr20 57902552 57902762 + 30.4 0.000 Intergenic Intergenic -101247 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr3-304 chr3 5139756 5139966 + 30.4 0.000 intron (NM_018184, intron 1 of 6) intron (NM_018184, intron 1 of 6) 17569 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr2-375 chr2 149587570 149587780 + 30.4 0.000 promoter-TSS (NM_015702) promoter-TSS (NM_015702) 100 NM_015702 27249 Hs.5324 NM_015702 ENSG00000168288 MMADHC C2orf25|CL25022|cblD metabolism of cobalamin associated D protein-coding chr14-188 chr14 102304993 102305203 + 30.4 0.000 promoter-TSS (NM_014226) promoter-TSS (NM_014226) 66 NM_001353831 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr7-283 chr7 100177420 100177630 + 30.4 0.000 promoter-TSS (NM_152742) promoter-TSS (NM_152742) -144 NM_152742 221914 Hs.211701 NM_152742 ENSG00000213420 GPC2 - glypican 2 protein-coding chr1-295 chr1 145859680 145859890 + 30.4 0.000 promoter-TSS (NM_006099) promoter-TSS (NM_006099) -704 NM_006099 10401 Hs.435761 NM_006099 ENSG00000131788 PIAS3 ZMIZ5 protein inhibitor of activated STAT 3 protein-coding chr6-118 chr6 108848405 108848615 + 30.4 0.000 promoter-TSS (NM_032131) promoter-TSS (NM_032131) 88 NM_032131 84071 Hs.645481 NM_032131 ENSG00000118690 ARMC2 SPGF38|bA787I22.1 armadillo repeat containing 2 protein-coding chr2-361 chr2 72825800 72826010 + 30.4 0.000 exon (NM_015189, exon 1 of 22) exon (NM_015189, exon 1 of 22) 128 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr17-197 chr17 77140678 77140888 + 30.4 0.000 promoter-TSS (NM_001143998) promoter-TSS (NM_001143998) -186 NM_003003 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chrX-13 chrX 149939690 149939900 + 30.4 0.000 intron (NR_027456, intron 1 of 11) intron (NR_027456, intron 1 of 11) 1247 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr16-251 chr16 788485 788695 + 30.4 0.000 promoter-TSS (NM_001324086) promoter-TSS (NM_001324086) -30 NM_022092 63922 Hs.153850 NM_022092 ENSG00000127586 CHTF18 C16orf41|C321D2.2|C321D2.3|C321D2.4|CHL12|Ctf18|RUVBL chromosome transmission fidelity factor 18 protein-coding chr2-282 chr2 26704512 26704722 + 30.4 0.000 intron (NM_002246, intron 1 of 1) intron (NM_002246, intron 1 of 1) 11895 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr10-277 chr10 68231277 68231487 + 30.4 0.000 exon (NM_145178, exon 1 of 1) exon (NM_145178, exon 1 of 1) 731 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding chr6-143 chr6 131380124 131380334 + 30.4 0.000 Intergenic LTR104_Mam|LTR|Gypsy 129825 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr10-180 chr10 49037301 49037511 + 30.4 0.000 intron (NM_001031746, intron 7 of 7) MER5A1|DNA|hAT-Charlie -51819 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr4-350 chr4 4430572 4430782 + 30.4 0.000 intron (NM_016930, intron 7 of 10) intron (NM_016930, intron 7 of 10) 31295 NM_001346300 53407 Hs.584913 NM_016930 ENSG00000168818 STX18 Ufe1 syntaxin 18 protein-coding chr17-658 chr17 2292196 2292406 + 30.4 0.000 intron (NM_017575, intron 6 of 18) intron (NM_017575, intron 6 of 18) 11484 NM_017575 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr22-168 chr22 41800457 41800667 + 30.4 0.000 promoter-TSS (NM_001304797) promoter-TSS (NM_001304797) -60 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr10-266 chr10 125048115 125048325 + 30.4 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -15350 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr12-131 chr12 109713609 109713819 + 30.4 0.000 promoter-TSS (NM_032829) promoter-TSS (NM_032829) -111 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr6-255 chr6 56713430 56713640 + 30.4 0.000 intron (NM_001144770, intron 3 of 94) intron (NM_001144770, intron 3 of 94) -70646 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr2-314 chr2 216670563 216670773 + 30.4 0.000 Intergenic Intergenic 11101 NM_001313990 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr8-202 chr8 13482739 13482949 + 30.4 0.000 intron (NM_024767, intron 2 of 4) L2c|LINE|L2 32007 NM_182643 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr15-281 chr15 62559172 62559382 + 30.4 0.000 Intergenic Intergenic 85904 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr9-156 chr9 99104716 99104926 + 30.4 0.000 promoter-TSS (NM_001130916) promoter-TSS (NM_001130916) -292 NM_001306210 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr3-300 chr3 139354024 139354234 + 30.4 0.000 intron (NM_001363893, intron 6 of 7) intron (NM_001363893, intron 6 of 7) 9578 NM_001363857 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr5-84 chr5 37379134 37379344 + 30.4 0.000 promoter-TSS (NM_001345999) promoter-TSS (NM_001345999) -79 NM_001345998 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr12-366 chr12 12979944 12980154 + 30.4 0.000 non-coding (NR_149063, exon 4 of 4) non-coding (NR_149063, exon 4 of 4) 212 NR_038920 100506314 Hs.127718 NR_038920 ENSG00000247498 GPRC5D-AS1 - GPRC5D and HEBP1 antisense RNA 1 ncRNA chr2-303 chr2 230416038 230416248 + 30.4 0.000 promoter-TSS (NM_001206703) promoter-TSS (NM_001206703) -13 NM_001206703 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr10-536 chr10 103045007 103045217 + 30.4 0.000 intron (NM_199076, intron 1 of 6) intron (NM_199076, intron 1 of 6) 108709 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr9-191 chr9 113221471 113221681 + 30.4 0.000 promoter-TSS (NM_015258) promoter-TSS (NM_015258) 32 NM_001859 1317 Hs.532315 NM_001859 ENSG00000136868 SLC31A1 COPT1|CTR1 solute carrier family 31 member 1 protein-coding chr7-285 chr7 102933882 102934092 + 30.4 0.000 exon (NM_005824, exon 2 of 5) exon (NM_005824, exon 2 of 5) 20987 NM_005824 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr2-493 chr2 45293184 45293394 + 30.4 0.000 Intergenic Intergenic -38348 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr11-264 chr11 393306 393516 + 30.4 0.000 promoter-TSS (NM_007183) promoter-TSS (NM_007183) -798 NM_007183 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr5-131 chr5 38845806 38846016 + 30.4 0.000 promoter-TSS (NM_001168355) promoter-TSS (NM_001168355) 53 NM_001168355 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr12-183 chr12 50085000 50085210 + 30.3 0.000 promoter-TSS (NM_003076) promoter-TSS (NM_003076) -237 NM_139071 6602 Hs.79335 NM_003076 ENSG00000066117 SMARCD1 BAF60A|CRACD1|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding chr2-614 chr2 219368816 219369026 + 30.3 0.000 Intergenic LTR16C|LTR|ERVL 18441 NM_001319118 23549 Hs.258551 NM_012100 ENSG00000123992 DNPEP ASPEP|DAP aspartyl aminopeptidase protein-coding chr19-497 chr19 52601046 52601256 + 30.3 0.000 TTS (NR_023311) TTS (NR_023311) 4467 NR_023311 7696 Hs.373648 NM_003438 ZNF137P ZNF137|pHZ-30 zinc finger protein 137, pseudogene pseudo chr5-411 chr5 95808736 95808946 + 30.3 0.000 Intergenic Intergenic 13885 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr2-300 chr2 127701316 127701526 + 30.3 0.000 promoter-TSS (NM_032740) promoter-TSS (NM_032740) -76 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding chr5-419 chr5 160508889 160509099 + 30.3 0.000 Intergenic Intergenic 23642 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chrX-39 chrX 154378783 154378993 + 30.3 0.000 promoter-TSS (NM_000117) promoter-TSS (NM_000117) -349 NM_000117 2010 Hs.522823 NM_000117 ENSG00000102119 EMD EDMD|LEMD5|STA emerin protein-coding chr2-1089 chr2 222572748 222572958 + 30.3 0.000 intron (NR_130154, intron 17 of 17) intron (NR_130154, intron 17 of 17) 83239 NM_005687 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chr17-126 chr17 3846219 3846429 + 30.3 0.000 promoter-TSS (NM_001114118) promoter-TSS (NM_001114118) -78 NM_001114118 55421 Hs.120963 NM_018553 ENSG00000074356 NCBP3 C17orf85|ELG|HSA277841 nuclear cap binding subunit 3 protein-coding chr9-307 chr9 124862041 124862251 + 30.3 0.000 promoter-TSS (NM_030978) promoter-TSS (NM_030978) 16 NM_030978 81873 Hs.132499 NM_030978 ENSG00000136950 ARPC5L ARC16-2 actin related protein 2/3 complex subunit 5 like protein-coding chr19-333 chr19 663071 663281 + 30.3 0.000 promoter-TSS (NM_001366018) promoter-TSS (NM_001366018) 38 NM_194460 55658 Hs.69554 NM_017876 ENSG00000070423 RNF126 - ring finger protein 126 protein-coding chr3-301 chr3 149466289 149466499 + 30.3 0.000 Intergenic Intergenic -8303 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr10-377 chr10 35090376 35090586 + 30.3 0.000 promoter-TSS (NM_001324375) promoter-TSS (NM_001324375) 133 NM_001198777 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr15-209 chr15 64536294 64536504 + 30.3 0.000 intron (NM_015042, intron 1 of 8) MLT1N2|LTR|ERVL-MaLR 36979 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr2-848 chr2 24702879 24703089 + 30.3 0.000 intron (NM_001362950, intron 11 of 23) intron (NM_001362950, intron 11 of 23) -90131 NM_024322 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr19-707 chr19 1452150 1452360 + 30.3 0.000 promoter-TSS (NM_001351273) promoter-TSS (NM_001351273) -729 NM_001351273 10297 Hs.446376 NM_005883 ENSG00000115266 APC2 APCL APC regulator of WNT signaling pathway 2 protein-coding chr12-575 chr12 77189440 77189650 + 30.3 0.000 Intergenic Intergenic -123976 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr9-398 chr9 110125326 110125536 + 30.3 0.000 promoter-TSS (NM_001136562) promoter-TSS (NM_001136562) -70 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr15-134 chr15 63503197 63503407 + 30.3 0.000 Intergenic Intergenic -1209 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr2-163 chr2 127858153 127858363 + 30.3 0.000 promoter-TSS (NM_004805) promoter-TSS (NM_004805) -103 NM_004805 5433 Hs.715348 NM_004805 ENSG00000144231 POLR2D HSRBP4|HSRPB4|RBP4|RPB16 RNA polymerase II subunit D protein-coding chr9-828 chr9 118961883 118962093 + 30.3 0.000 Intergenic Intergenic 282317 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr4-259 chr4 16898350 16898560 + 30.3 0.000 exon (NM_001290, exon 1 of 8) exon (NM_001290, exon 1 of 8) 190 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr12-263 chr12 111570064 111570274 + 30.3 0.000 intron (NM_001310121, intron 1 of 25) L3|LINE|CR1 29146 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr4-175 chr4 82891240 82891450 + 30.3 0.000 promoter-TSS (NM_001077206) promoter-TSS (NM_001077206) -65 NM_001300745 22872 Hs.370024 NM_014933 ENSG00000138674 SEC31A ABP125|ABP130|HSPC275|HSPC334|SEC31L1 SEC31 homolog A, COPII coat complex component protein-coding chr11-276 chr11 64803444 64803654 + 30.3 0.000 promoter-TSS (NM_004579) promoter-TSS (NM_004579) -335 NM_001307990 5871 Hs.534341 NM_004579 ENSG00000168067 MAP4K2 BL44|GCK|RAB8IP mitogen-activated protein kinase kinase kinase kinase 2 protein-coding chr4-74 chr4 18021940 18022150 + 30.3 0.000 promoter-TSS (NM_001365658) promoter-TSS (NM_001365658) -170 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr2-623 chr2 97950620 97950830 + 30.3 0.000 intron (NM_015348, intron 1 of 40) intron (NM_015348, intron 1 of 40) 45223 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr12-285 chr12 121802960 121803170 + 30.3 0.000 promoter-TSS (NR_002809) promoter-TSS (NR_002809) -119 NR_152739 338799 Hs.524804 NR_002809 ENSG00000212694 LINC01089 LIMT long intergenic non-protein coding RNA 1089 ncRNA chr6-180 chr6 36442769 36442979 + 30.3 0.000 promoter-TSS (NM_152990) promoter-TSS (NM_152990) -20 NM_152990 222659 Hs.520097 NM_152990 ENSG00000179165 PXT1 STEPP peroxisomal testis enriched protein 1 protein-coding chr20-129 chr20 50837694 50837904 + 30.3 0.000 intron (NM_001010974, intron 3 of 3) intron (NM_001010974, intron 3 of 3) 42905 NM_017843 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr17-262 chr17 63773565 63773775 + 30.3 0.000 promoter-TSS (NM_020198) promoter-TSS (NM_020198) -73 NM_020198 57003 Hs.202011 NM_020198 ENSG00000108588 CCDC47 GK001|MSTP041|THNS coiled-coil domain containing 47 protein-coding chr1-553 chr1 83151280 83151490 + 30.3 0.000 intron (NR_147074, intron 9 of 10) intron (NR_147074, intron 9 of 10) -165177 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chr19-528 chr19 53520713 53520923 + 30.3 0.000 promoter-TSS (NM_018555) promoter-TSS (NM_018555) -196 NM_018555 55422 Hs.185674 NM_018555 ENSG00000130844 ZNF331 RITA|ZNF361|ZNF463 zinc finger protein 331 protein-coding chr16-128 chr16 667968 668178 + 30.3 0.000 promoter-TSS (NM_138769) promoter-TSS (NM_138769) -10 NM_001352287 89941 Hs.513242 NM_138769 ENSG00000140983 RHOT2 ARHT2|C16orf39|MIRO-2|MIRO2|RASL ras homolog family member T2 protein-coding chr6-135 chr6 41546046 41546256 + 30.3 0.000 promoter-TSS (NR_126417) promoter-TSS (NR_126417) 92 NR_126417 101060264 Hs.571099 NR_126415 ENSG00000234753 FOXP4-AS1 - FOXP4 antisense RNA 1 ncRNA chr9-141 chr9 96450075 96450285 + 30.3 0.000 promoter-TSS (NM_014282) promoter-TSS (NM_014282) 11 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr9-381 chr9 127539163 127539373 + 30.3 0.000 intron (NM_001035534, intron 1 of 13) MIRb|SINE|MIR 29805 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr3-335 chr3 59737278 59737488 + 30.3 0.000 Intergenic Intergenic -78886 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr10-390 chr10 114271733 114271943 + 30.3 0.000 intron (NM_001272046, intron 5 of 13) intron (NM_001272046, intron 5 of 13) 32224 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr5-382 chr5 169980561 169980771 + 30.3 0.000 promoter-TSS (NM_001346304) promoter-TSS (NM_001346304) -171 NM_001129891 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr10-440 chr10 909833 910043 + 30.3 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 21767 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr10-308 chr10 74151104 74151314 + 30.3 0.000 promoter-TSS (NM_006721) promoter-TSS (NM_006721) -12 NM_006721 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr19-525 chr19 36687269 36687479 + 30.3 0.000 promoter-TSS (NM_001300979) promoter-TSS (NM_001300979) 75 NR_110708 101927621 Hs.125653 NR_110707 ENSG00000225975 LINC01534 - long intergenic non-protein coding RNA 1534 ncRNA chr17-456 chr17 44557157 44557367 + 30.3 0.000 promoter-TSS (NM_001466) promoter-TSS (NM_001466) -222 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr4-297 chr4 159358330 159358540 + 30.3 0.000 3' UTR (NM_014247, exon 24 of 24) 3' UTR (NM_014247, exon 24 of 24) 90626 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr14-221 chr14 44961909 44962119 + 30.3 0.000 promoter-TSS (NM_001308112) promoter-TSS (NM_001308112) -67 NM_017658 54813 Hs.550906 NM_017658 ENSG00000179454 KLHL28 BTBD5 kelch like family member 28 protein-coding chr2-513 chr2 74917758 74917968 + 30.3 0.000 intron (NR_125792, intron 1 of 4) L2a|LINE|L2 8732 NR_125792 102724515 Hs.708649 NR_125792 ENSG00000204792 LINC01291 - long intergenic non-protein coding RNA 1291 ncRNA chr19-465 chr19 10817744 10817954 + 30.2 0.000 promoter-TSS (NR_029586) promoter-TSS (NR_029586) -353 NR_029586 406976 NR_029586 ENSG00000207752 MIR199A1 MIR-199-s|MIRN199A1|mir-199a-1 microRNA 199a-1 ncRNA chr12-370 chr12 89352486 89352696 + 30.2 0.000 promoter-TSS (NM_001946) promoter-TSS (NM_001946) -90 NM_001946 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr4-311 chr4 186685735 186685945 + 30.2 0.000 intron (NM_005245, intron 2 of 26) intron (NM_005245, intron 2 of 26) 38016 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr7-304 chr7 100247445 100247655 + 30.2 0.000 intron (NR_028038, intron 1 of 6) intron (NR_028038, intron 1 of 6) 24655 NR_028038 352954 Hs.556063 NM_178831 ENSG00000239521 CASTOR3 GATS|STAG3OS CASTOR family member 3 protein-coding chr5-113 chr5 154754929 154755139 + 30.2 0.000 promoter-TSS (NM_001367718) promoter-TSS (NM_001367718) -343 NM_033551 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr2-523 chr2 33848583 33848793 + 30.2 0.000 intron (NR_126403, intron 1 of 5) MER4B-int|LTR|ERV1 -120471 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr14-194 chr14 70359572 70359782 + 30.2 0.000 promoter-TSS (NM_001204090) promoter-TSS (NM_001204090) 6 NM_001204090 51241 Hs.709581 NM_016468 ENSG00000133983 COX16 C14orf112|HSPC203|hCOX16 cytochrome c oxidase assembly factor COX16 protein-coding chr9-308 chr9 125200404 125200614 + 30.2 0.000 promoter-TSS (NM_005833) promoter-TSS (NM_005833) -33 NM_001174152 10244 Hs.19012 NM_005833 ENSG00000136933 RABEPK RAB9P40|bA65N13.1|p40 Rab9 effector protein with kelch motifs protein-coding chr2-534 chr2 202375010 202375220 + 30.2 0.000 Intergenic Intergenic -1212 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr12-445 chr12 99455372 99455582 + 30.2 0.000 intron (NM_152788, intron 10 of 25) L1PB1|LINE|L1 -192276 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr7-430 chr7 128387868 128388078 + 30.2 0.000 intron (NR_148338, intron 2 of 2) intron (NR_148338, intron 2 of 2) 1291 NR_148338 107986845 Hs.592261 NR_148338 LOC107986845 - uncharacterized LOC107986845 ncRNA chr8-93 chr8 142614553 142614763 + 30.2 0.000 promoter-TSS (NM_015193) promoter-TSS (NM_015193) -179 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr9-215 chr9 92115436 92115646 + 30.2 0.000 promoter-TSS (NM_006415) promoter-TSS (NM_006415) -128 NM_001368272 10558 Hs.90458 NM_006415 ENSG00000090054 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase long chain base subunit 1 protein-coding chr3-266 chr3 130893949 130894159 + 30.2 0.000 promoter-TSS (NM_001199185) promoter-TSS (NM_001199185) -30 NM_001199184 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr18-60 chr18 56638702 56638912 + 30.2 0.000 promoter-TSS (NR_024546) promoter-TSS (NR_024546) -215 NM_004786 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr15-313 chr15 45118115 45118325 + 30.2 0.000 TTS (NM_001276266) TTS (NM_001276266) 3894 NM_207581 405753 Hs.497987 NM_207581 ENSG00000140274 DUOXA2 SIMNIPHOM|TDH5 dual oxidase maturation factor 2 protein-coding chr13-139 chr13 76723732 76723942 + 30.2 0.000 Intergenic L3|LINE|CR1 162568 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr9-380 chr9 124320417 124320627 + 30.2 0.000 intron (NM_001166169, intron 4 of 9) intron (NM_001166169, intron 4 of 9) 28102 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr1-279 chr1 52726391 52726601 + 30.2 0.000 promoter-TSS (NM_024646) promoter-TSS (NM_024646) 43 NM_024646 79699 Hs.476280 NM_024646 ENSG00000162378 ZYG11B ZYG11 zyg-11 family member B, cell cycle regulator protein-coding chr6-175 chr6 37353989 37354199 + 30.2 0.000 non-coding (NR_046399, exon 1 of 8) non-coding (NR_046399, exon 1 of 8) 111 NM_183078 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr2-678 chr2 11710368 11710578 + 30.2 0.000 intron (NM_001349207, intron 1 of 20) intron (NM_001349207, intron 1 of 20) -13842 NM_001261427 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr17-448 chr17 51153378 51153588 + 30.2 0.000 promoter-TSS (NM_000269) promoter-TSS (NM_000269) -53 NR_037149 654364 Hs.463456 NM_001018136 ENSG00000011052 NME1-NME2 NM23-LV|NMELV NME1-NME2 readthrough protein-coding chr9-488 chr9 137760470 137760680 + 30.2 0.000 intron (NM_001354263, intron 9 of 26) intron (NM_001354263, intron 9 of 26) 27831 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr20-216 chr20 61186118 61186328 + 30.2 0.000 Intergenic Intergenic -66038 NM_001794 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr17-285 chr17 55750980 55751190 + 30.2 0.000 promoter-TSS (NM_021213) promoter-TSS (NM_021213) -20 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr1-619 chr1 203480817 203481027 + 30.2 0.000 intron (NM_002725, intron 1 of 2) intron (NM_002725, intron 1 of 2) 5116 NM_201348 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr2-277 chr2 61854495 61854705 + 30.2 0.000 promoter-TSS (NM_001201543) promoter-TSS (NM_001201543) -540 NR_037710 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr9-118 chr9 34377002 34377212 + 30.2 0.000 promoter-TSS (NM_020702) promoter-TSS (NM_020702) -209 NM_020702 57462 Hs.522083 NM_020702 ENSG00000164976 MYORG IBGC7|KIAA1161|NET37 myogenesis regulating glycosidase (putative) protein-coding chr14-133 chr14 99574351 99574561 + 30.2 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 29751 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr2-582 chr2 66840037 66840247 + 30.2 0.000 Intergenic Intergenic -64294 NR_110169 101060019 Hs.116425 NR_110169 ENSG00000230525 LINC01799 - long intergenic non-protein coding RNA 1799 ncRNA chr19-312 chr19 41958622 41958832 + 30.2 0.000 intron (NM_006423, intron 2 of 4) CpG 594 NM_006423 10567 Hs.11417 NM_006423 ENSG00000105404 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 protein-coding chr18-81 chr18 6741471 6741681 + 30.2 0.000 intron (NM_001366230, intron 1 of 17) intron (NM_001366230, intron 1 of 17) -11714 NR_134645 101927168 Hs.242240 NR_134645 LOC101927168 - uncharacterized LOC101927168 ncRNA chrX-28 chrX 41085300 41085510 + 30.2 0.000 promoter-TSS (NM_001039590) promoter-TSS (NM_001039590) -40 NM_001039590 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr16-491 chr16 84730665 84730875 + 30.2 0.000 intron (NM_001272075, intron 2 of 14) intron (NM_001272075, intron 2 of 14) 30770 NR_073577 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr22-216 chr22 36195012 36195222 + 30.2 0.000 intron (NM_145660, intron 4 of 4) intron (NM_145660, intron 4 of 4) 9716 NM_145660 80832 Hs.115099 NM_030643 ENSG00000100336 APOL4 APOL-IV|APOLIV apolipoprotein L4 protein-coding chr19-815 chr19 47599011 47599221 + 30.2 0.000 Intergenic Intergenic -9080 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr7-306 chr7 140479463 140479673 + 30.2 0.000 promoter-TSS (NM_001291663) promoter-TSS (NM_001291663) 1 NR_117084 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chr21-71 chr21 34836373 34836583 + 30.2 0.000 intron (NM_001001890, intron 3 of 5) intron (NM_001001890, intron 3 of 5) 52221 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr8-101 chr8 31033790 31034000 + 30.2 0.000 promoter-TSS (NM_001323311) promoter-TSS (NM_001323311) -539 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr9-479 chr9 125538020 125538230 + 30.2 0.000 intron (NM_001006618, intron 7 of 7) L2|LINE|L2 169083 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr2-446 chr2 219142417 219142627 + 30.2 0.000 intron (NM_024782, intron 5 of 7) intron (NM_024782, intron 5 of 7) 18343 NM_024782 79840 Hs.225988 NM_024782 ENSG00000187736 NHEJ1 XLF non-homologous end joining factor 1 protein-coding chr7-384 chr7 135977242 135977452 + 30.2 0.000 promoter-TSS (NM_145808) promoter-TSS (NM_145808) 12 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding chr1-939 chr1 233543694 233543904 + 30.2 0.000 Intergenic Intergenic -70307 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr2-214 chr2 96208803 96209013 + 30.2 0.000 promoter-TSS (NM_020151) promoter-TSS (NM_020151) -73 NM_020151 56910 Hs.469331 NM_020151 ENSG00000084090 STARD7 GTT1 StAR related lipid transfer domain containing 7 protein-coding chr11-810 chr11 11977283 11977493 + 30.2 0.000 intron (NM_015881, intron 4 of 7) intron (NM_015881, intron 4 of 7) 31251 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr1-361 chr1 32072692 32072902 + 30.0 0.000 promoter-TSS (NM_018056) promoter-TSS (NM_018056) -142 NM_001319678 55116 Hs.25544 NM_018056 ENSG00000121775 TMEM39B - transmembrane protein 39B protein-coding chr5-121 chr5 62306084 62306294 + 30.0 0.000 promoter-TSS (NM_004520) promoter-TSS (NM_004520) 27 NM_001243952 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr19-327 chr19 35644445 35644655 + 30.0 0.000 intron (NM_014209, intron 6 of 6) CpG-14290 2805 NM_001300974 2116 Hs.194061 NM_014209 ENSG00000105672 ETV2 ER71|ETSRP71 ETS variant 2 protein-coding chr11-314 chr11 62601760 62601970 + 30.0 0.000 promoter-TSS (NM_004739) promoter-TSS (NM_004739) 0 NM_004739 9219 Hs.173043 NM_004739 ENSG00000149480 MTA2 MTA1L1|PID metastasis associated 1 family member 2 protein-coding chr20-139 chr20 18467001 18467211 + 30.0 0.000 promoter-TSS (NM_001351683) promoter-TSS (NM_001351683) -76 NM_018152 55184 Hs.472225 NM_018152 ENSG00000089091 DZANK1 ANKRD64|C20orf12|C20orf84 double zinc ribbon and ankyrin repeat domains 1 protein-coding chr17-515 chr17 2091245 2091455 + 30.0 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -2589 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr9-568 chr9 16315865 16316075 + 30.0 0.000 Intergenic Intergenic -39657 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr9-187 chr9 123929871 123930081 + 30.0 0.000 non-coding (NR_148208, exon 1 of 21) non-coding (NR_148208, exon 1 of 21) 150 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr5-474 chr5 139369279 139369489 + 30.0 0.000 non-coding (NR_109830, exon 4 of 4) non-coding (NR_109830, exon 4 of 4) 13913 NM_005847 9963 Hs.643467 NM_005847 ENSG00000170482 SLC23A1 SLC23A2|SVCT1|YSPL3 solute carrier family 23 member 1 protein-coding chr1-322 chr1 32725287 32725497 + 30.0 0.000 Intergenic Intergenic -16438 NM_020888 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr22-250 chr22 38241040 38241250 + 30.0 0.000 intron (NM_001195071, intron 3 of 8) HAL1|LINE|L1 -16425 NR_132774 106635525 NR_132774 SNORA92 - small nucleolar RNA, H/ACA box 92 snoRNA chr7-105 chr7 76997495 76997705 + 30.0 0.000 intron (NR_023383, intron 2 of 10) (GT)n|Simple_repeat|Simple_repeat 16778 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr11-393 chr11 66438510 66438720 + 30.0 0.000 intron (NR_120589, intron 1 of 4) intron (NR_120589, intron 1 of 4) 233 NM_170739 65003 Hs.418450 NM_016050 ENSG00000174547 MRPL11 CGI-113|L11MT|MRP-L11 mitochondrial ribosomal protein L11 protein-coding chr2-294 chr2 130391566 130391776 + 30.0 0.000 Intergenic CpG 35615 NM_014369 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr5-181 chr5 177592072 177592282 + 30.0 0.000 promoter-TSS (NM_017510) promoter-TSS (NM_017510) -26 NM_017510 54732 Hs.279929 NM_017510 ENSG00000184840 TMED9 GMP25|HSGP25L2G|p24a2|p24alpha2|p25 transmembrane p24 trafficking protein 9 protein-coding chr4-373 chr4 42412328 42412538 + 30.0 0.000 3' UTR (NM_006095, exon 37 of 37) 3' UTR (NM_006095, exon 37 of 37) 14945 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr15-280 chr15 57551846 57552056 + 30.0 0.000 Intergenic Intergenic -39953 NR_104368 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr5-184 chr5 81751049 81751259 + 30.0 0.000 promoter-TSS (NM_001256732) promoter-TSS (NM_001256732) 99 NM_001256736 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr13-35 chr13 96053362 96053572 + 30.0 0.000 promoter-TSS (NM_020121) promoter-TSS (NM_020121) -66 NM_020121 55757 Hs.193226 NM_020121 ENSG00000102595 UGGT2 HUGT2|UGCGL2|UGT2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding chr19-542 chr19 18986864 18987074 + 30.0 0.000 Intergenic Intergenic -45752 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr12-193 chr12 57752311 57752521 + 30.0 0.000 promoter-TSS (NM_000075) promoter-TSS (NM_000075) -106 NM_000075 1019 Hs.95577 NM_000075 ENSG00000135446 CDK4 CMM3|PSK-J3 cyclin dependent kinase 4 protein-coding chr6-151 chr6 95577487 95577697 + 30.0 0.000 promoter-TSS (NR_104136) promoter-TSS (NR_104136) 57 NM_024641 79694 Hs.734632 NM_024641 ENSG00000172469 MANEA ENDO|hEndo mannosidase endo-alpha protein-coding chr1-690 chr1 19715696 19715906 + 30.0 0.000 intron (NM_001349112, intron 12 of 14) intron (NM_001349112, intron 12 of 14) 50926 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr9-323 chr9 93453566 93453776 + 30.0 0.000 promoter-TSS (NM_198841) promoter-TSS (NM_198841) -70 NR_136229 158293 Hs.350364 NM_198841 ENSG00000188938 FAM120AOS C9orf10OS family with sequence similarity 120A opposite strand protein-coding chr5-413 chr5 132389688 132389898 + 30.0 0.000 intron (NM_003060, intron 6 of 9) intron (NM_003060, intron 6 of 9) -19877 NR_110997 553103 Hs.570908 NR_110997 ENSG00000233006 MIR3936HG SLC22A5-AS1 MIR3936 host gene ncRNA chr2-288 chr2 189784375 189784585 + 30.0 0.000 promoter-TSS (NM_001321048) promoter-TSS (NM_001321048) 30 NM_001321045 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr15-244 chr15 44489626 44489836 + 30.0 0.000 intron (NM_016396, intron 4 of 12) L2c|LINE|L2 47169 NR_034171 645212 Hs.594287 NR_034170 EIF3J-DT EIF3J-AS1 EIF3J divergent transcript ncRNA chr20-73 chr20 653276 653486 + 30.0 0.000 promoter-TSS (NM_080725) promoter-TSS (NM_080725) -181 NM_080725 140809 Hs.516830 NM_080725 ENSG00000271303 SRXN1 C20orf139|Npn3|SRX|SRX1 sulfiredoxin 1 protein-coding chr14-65 chr14 104933340 104933550 + 30.0 0.000 3' UTR (NM_001308174, exon 11 of 11) 3' UTR (NM_001308174, exon 11 of 11) 8566 NM_001308174 122618 Hs.407101 NM_138790 ENSG00000166428 PLD4 C14orf175 phospholipase D family member 4 protein-coding chr3-243 chr3 136196628 136196838 + 30.0 0.000 promoter-TSS (NM_018133) promoter-TSS (NM_018133) -398 NM_018133 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr19-584 chr19 41859901 41860111 + 30.0 0.000 promoter-TSS (NM_001022) promoter-TSS (NM_001022) -249 NM_001321485 6223 Hs.438429 NM_001022 ENSG00000105372 RPS19 DBA|DBA1|S19|eS19 ribosomal protein S19 protein-coding chr20-163 chr20 41249383 41249593 + 30.0 0.000 intron (NM_015035, intron 2 of 3) intron (NM_015035, intron 2 of 3) 50632 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr14-255 chr14 94904756 94904966 + 30.0 0.000 Intergenic Intergenic 134219 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr1-1052 chr1 96560253 96560463 + 30.0 0.000 Intergenic LTR26|LTR|ERV1 -161247 NM_021190 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr11-249 chr11 62831804 62832014 + 30.0 0.000 promoter-TSS (NR_135084) promoter-TSS (NR_135084) 142 NM_001244666 6811 Hs.654602 NM_003164 ENSG00000162236 STX5 SED5|STX5A syntaxin 5 protein-coding chr6-438 chr6 155201829 155202039 + 30.0 0.000 intron (NM_012454, intron 13 of 25) intron (NM_012454, intron 13 of 25) -15032 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr13-124 chr13 24148894 24149104 + 30.0 0.000 intron (NM_001286792, intron 3 of 14) intron (NM_001286792, intron 3 of 14) -11721 NM_001166271 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr10-339 chr10 44908152 44908362 + 30.0 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -3059 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr1-491 chr1 23959578 23959788 + 30.0 0.000 promoter-TSS (NM_017761) promoter-TSS (NM_017761) -145 NM_017761 55629 Hs.7862 NM_017761 ENSG00000189266 PNRC2 - proline rich nuclear receptor coactivator 2 protein-coding chr5-293 chr5 171418672 171418882 + 30.0 0.000 promoter-TSS (NM_003862) promoter-TSS (NM_003862) -870 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr1-682 chr1 161706532 161706742 + 30.0 0.000 promoter-TSS (NM_001184873) promoter-TSS (NM_001184873) -592 NM_001184872 84824 Hs.266331 NM_032738 ENSG00000132185 FCRLA FCRL|FCRL1|FCRLM1|FCRLX|FCRLb|FCRLc1|FCRLc2|FCRLd|FCRLe|FCRX|FREB Fc receptor like A protein-coding chr8-568 chr8 93936051 93936261 + 30.0 0.000 Intergenic LTR62|LTR|ERVL 19209 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr1-232 chr1 44800082 44800292 + 30.0 0.000 promoter-TSS (NM_004073) promoter-TSS (NM_004073) -190 NM_004073 1263 Hs.632415 NM_004073 ENSG00000173846 PLK3 CNK|FNK|PLK-3|PRK polo like kinase 3 protein-coding chr16-516 chr16 53809310 53809520 + 30.0 0.000 intron (NM_001363897, intron 1 of 7) Kanga2_a|DNA|TcMar-Tc2 105259 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr7-382 chr7 76340803 76341013 + 30.0 0.000 intron (NM_012479, intron 1 of 1) AluJb|SINE|Alu 18083 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|EIEE56|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding chrX-43 chrX 152830770 152830980 + 30.0 0.000 promoter-TSS (NM_015922) promoter-TSS (NM_015922) -92 NM_001129765 50814 Hs.57698 NM_015922 ENSG00000147383 NSDHL H105E3|SDR31E1|XAP104 NAD(P) dependent steroid dehydrogenase-like protein-coding chr11-824 chr11 65941462 65941672 + 30.0 0.000 Intergenic L2|LINE|L2 -4077 NM_152762 254187 Hs.350671 NM_152762 ENSG00000175513 TSGA10IP FAM161C testis specific 10 interacting protein protein-coding chr13-168 chr13 114319415 114319625 + 30.0 0.000 intron (NM_001164145, intron 1 of 2) intron (NM_001164145, intron 1 of 2) 5017 NM_001164144 283489 Hs.7542 NM_032436 ENSG00000198824 CHAMP1 C13orf8|CAMP|CHAMP|MRD40|ZNF828 chromosome alignment maintaining phosphoprotein 1 protein-coding chr4-54 chr4 8158824 8159034 + 29.9 0.000 promoter-TSS (NM_001130083) promoter-TSS (NM_001130083) -116 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr2-465 chr2 39513762 39513972 + 29.9 0.000 intron (NR_037875, intron 3 of 5) intron (NR_037875, intron 3 of 5) 76451 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr5-232 chr5 137296385 137296595 + 29.9 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 168293 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr21-152 chr21 38503790 38504000 + 29.9 0.000 intron (NR_111949, intron 3 of 4) intron (NR_111949, intron 3 of 4) -5391 NM_001136155 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr3-162 chr3 11096754 11096964 + 29.9 0.000 Intergenic Intergenic -40379 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr9-285 chr9 96777929 96778139 + 29.9 0.000 promoter-TSS (NM_014930) promoter-TSS (NM_014930) 53 NM_001314059 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding chr14-183 chr14 50955764 50955974 + 29.9 0.000 Intergenic Intergenic -11386 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr10-227 chr10 122112735 122112945 + 29.9 0.000 promoter-TSS (NM_001291879) promoter-TSS (NM_001291879) -45 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr16-257 chr16 4768587 4768797 + 29.9 0.000 Intergenic Intergenic -1530 NM_001303450 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr5-557 chr5 143837375 143837585 + 29.9 0.000 Intergenic Intergenic 25319 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr9-179 chr9 34458496 34458706 + 29.9 0.000 promoter-TSS (NM_001184941) promoter-TSS (NM_001184941) -31 NM_001184943 203259 Hs.493771 NM_147202 ENSG00000164970 FAM219A C9orf25 family with sequence similarity 219 member A protein-coding chr7-362 chr7 133053311 133053521 + 29.9 0.000 intron (NR_133671, intron 2 of 10) intron (NR_133671, intron 2 of 10) -18501 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr3-364 chr3 24220898 24221108 + 29.9 0.000 intron (NM_001354714, intron 2 of 8) intron (NM_001354714, intron 2 of 8) 69679 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr1-766 chr1 81832619 81832829 + 29.9 0.000 intron (NM_001366002, intron 2 of 20) intron (NM_001366002, intron 2 of 20) 30271 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr22-282 chr22 38228694 38228904 + 29.9 0.000 intron (NM_001195071, intron 5 of 8) intron (NM_001195071, intron 5 of 8) -4079 NR_132774 106635525 NR_132774 SNORA92 - small nucleolar RNA, H/ACA box 92 snoRNA chr2-372 chr2 54904158 54904368 + 29.9 0.000 intron (NM_001039753, intron 23 of 40) intron (NM_001039753, intron 23 of 40) 106009 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr13-62 chr13 46211647 46211857 + 29.9 0.000 promoter-TSS (NM_001282460) promoter-TSS (NM_001282460) -176 NM_001282460 220416 Hs.267765 NM_001024609 ENSG00000173988 LRRC63 - leucine rich repeat containing 63 protein-coding chr12-525 chr12 65892090 65892300 + 29.9 0.000 intron (NM_001300918, intron 3 of 4) intron (NM_001300918, intron 3 of 4) -9870 NR_158985 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr18-189 chr18 59716071 59716281 + 29.9 0.000 Intergenic Intergenic -18753 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr2-588 chr2 190861395 190861605 + 29.9 0.000 Intergenic Intergenic -19321 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr16-434 chr16 57367451 57367661 + 29.9 0.000 Intergenic L1MC5a|LINE|L1 -4934 NM_002996 6376 Hs.531668 NM_002996 ENSG00000006210 CX3CL1 ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin C-X3-C motif chemokine ligand 1 protein-coding chr11-478 chr11 5280746 5280956 + 29.9 0.000 Intergenic Intergenic -10906 NM_005330 3046 Hs.655195 NM_005330 ENSG00000213931 HBE1 HBE hemoglobin subunit epsilon 1 protein-coding chr11-287 chr11 66345092 66345302 + 29.9 0.000 promoter-TSS (NM_015399) promoter-TSS (NM_015399) -93 NM_001024957 25855 Hs.100426 NM_015399 ENSG00000174744 BRMS1 - BRMS1 transcriptional repressor and anoikis regulator protein-coding chr1-252 chr1 54581701 54581911 + 29.9 0.000 intron (NM_015547, intron 1 of 16) intron (NM_015547, intron 1 of 16) 33578 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr19-759 chr19 13785037 13785247 + 29.9 0.000 Intergenic Intergenic -10301 NM_001367834 65249 Hs.466015 NM_023072 ENSG00000132003 ZSWIM4 - zinc finger SWIM-type containing 4 protein-coding chr3-256 chr3 193593100 193593310 + 29.9 0.000 promoter-TSS (NM_130834) promoter-TSS (NM_130834) -3 NM_001354663 4976 Hs.594504 NM_015560 ENSG00000198836 OPA1 BERHS|MGM1|MTDPS14|NPG|NTG|largeG OPA1 mitochondrial dynamin like GTPase protein-coding chr11-253 chr11 13277418 13277628 + 29.9 0.000 promoter-TSS (NR_147785) promoter-TSS (NR_147785) -204 NM_001030272 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr9-277 chr9 129006867 129007077 + 29.9 0.000 TTS (NM_001369913) TTS (NM_001369913) 21359 NR_163192 56904 Hs.460238 NM_020145 ENSG00000148341 SH3GLB2 PP6569|PP9455|RRIG1 SH3 domain containing GRB2 like, endophilin B2 protein-coding chr11-327 chr11 73157530 73157740 + 29.9 0.000 Intergenic Intergenic -15317 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr1-643 chr1 10281044 10281254 + 29.9 0.000 intron (NM_001365951, intron 14 of 48) intron (NM_001365951, intron 14 of 48) -17817 NR_004394 26827 NR_004394 ENSG00000206625 RNU6-1 RNU6|RNU6A|U6|U6-1 RNA, U6 small nuclear 1 snRNA chr14-150 chr14 60649313 60649523 + 29.9 0.000 promoter-TSS (NM_005982) promoter-TSS (NM_005982) 59 NM_005982 6495 Hs.633506 NM_005982 ENSG00000126778 SIX1 BOS3|DFNA23|TIP39 SIX homeobox 1 protein-coding chr3-553 chr3 136070970 136071180 + 29.9 0.000 intron (NM_181897, intron 5 of 12) intron (NM_181897, intron 5 of 12) 48333 NM_181897 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr2-154 chr2 149330493 149330703 + 29.9 0.000 promoter-TSS (NM_194317) promoter-TSS (NM_194317) 11 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr1-696 chr1 92831807 92832017 + 29.9 0.000 promoter-TSS (NR_146333) promoter-TSS (NR_146333) -74 NR_146333 6125 Hs.532359 NM_000969 ENSG00000122406 RPL5 L5|MSTP030|PPP1R135|uL18 ribosomal protein L5 protein-coding chr13-60 chr13 94601697 94601907 + 29.9 0.000 promoter-TSS (NM_180989) promoter-TSS (NM_180989) -55 NM_180989 160897 Hs.439363 NM_180989 ENSG00000152749 GPR180 ITR G protein-coupled receptor 180 protein-coding chr10-264 chr10 102854377 102854587 + 29.9 0.000 intron (NM_001136200, intron 1 of 4) CpG 223 NM_144591 119032 Hs.34492 NM_144591 ENSG00000166275 BORCS7 C10orf32 BLOC-1 related complex subunit 7 protein-coding chr6-336 chr6 80004390 80004600 + 29.9 0.000 promoter-TSS (NM_001166691) promoter-TSS (NM_001166691) -110 NM_001166691 7272 Hs.169840 NM_003318 ENSG00000112742 TTK CT96|ESK|MPH1|MPS1|MPS1L1|PYT TTK protein kinase protein-coding chr10-436 chr10 110530256 110530466 + 29.9 0.000 Intergenic CpG 32454 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr10-271 chr10 73495572 73495782 + 29.9 0.000 promoter-TSS (NR_132103) promoter-TSS (NR_132103) -75 NR_132103 101929145 Hs.434502 NR_132103 ENSG00000221817 PPP3CB-AS1 USP54-AS1 PPP3CB antisense RNA 1 (head to head) ncRNA chr11-408 chr11 65516305 65516515 + 29.9 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -8673 NM_020680 57410 Hs.238839 NM_020680 ENSG00000142186 SCYL1 GKLP|HT019|NKTL|NTKL|P105|SCAR21|TAPK|TEIF|TRAP SCY1 like pseudokinase 1 protein-coding chr3-484 chr3 112470885 112471095 + 29.9 0.000 intron (NM_001085357, intron 2 of 3) intron (NM_001085357, intron 2 of 3) 28482 NM_181780 151888 Hs.445162 NM_181780 ENSG00000186265 BTLA BTLA1|CD272 B and T lymphocyte associated protein-coding chr9-394 chr9 130860862 130861072 + 29.9 0.000 intron (NM_007313, intron 3 of 10) intron (NM_007313, intron 3 of 10) 25713 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr12-194 chr12 75391086 75391296 + 29.9 0.000 promoter-TSS (NM_001355025) promoter-TSS (NM_001355025) 102 NM_001270396 144321 Hs.406728 NM_152436 ENSG00000180481 GLIPR1L2 - GLIPR1 like 2 protein-coding chr11-488 chr11 78574889 78575099 + 29.9 0.000 promoter-TSS (NM_001243251) promoter-TSS (NM_001243251) -130 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr16-363 chr16 20763824 20764034 + 29.9 0.000 promoter-TSS (NM_202000) promoter-TSS (NM_202000) -61 NM_202000 6296 Hs.706754 NM_005622 ENSG00000005187 ACSM3 SA|SAH acyl-CoA synthetase medium chain family member 3 protein-coding chr9-482 chr9 131383304 131383514 + 29.9 0.000 Intergenic Intergenic -46681 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr10-299 chr10 119253507 119253717 + 29.9 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 46041 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr1-356 chr1 154183160 154183370 + 29.9 0.000 promoter-TSS (NM_001278189) promoter-TSS (NM_001278189) -16 NR_103461 7170 Hs.535581 NM_152263 ENSG00000143549 TPM3 CAPM1|CFTD|HEL-189|HEL-S-82p|NEM1|OK/SW-cl.5|TM-5|TM3|TM30|TM30nm|TM5|TPM3nu|TPMsk3|TRK|hscp30 tropomyosin 3 protein-coding chr16-339 chr16 70691885 70692095 + 29.9 0.000 intron (NM_001351157, intron 17 of 17) intron (NM_001351157, intron 17 of 17) -5937 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr19-657 chr19 6232622 6232832 + 29.9 0.000 intron (NM_005934, intron 3 of 11) L1MB7|LINE|L1 47248 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr11-437 chr11 130413455 130413665 + 29.9 0.000 intron (NM_007037, intron 5 of 8) intron (NM_007037, intron 5 of 8) 15049 NM_007037 11095 Hs.271605 NM_007037 ENSG00000134917 ADAMTS8 ADAM-TS8|METH2 ADAM metallopeptidase with thrombospondin type 1 motif 8 protein-coding chr17-503 chr17 82381094 82381304 + 29.9 0.000 Intergenic Intergenic 6922 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr2-685 chr2 68971956 68972166 + 29.8 0.000 Intergenic Intergenic -2512 NM_019617 56287 Hs.69319 NM_019617 ENSG00000169605 GKN1 AMP18|BRICD1|CA11|FOV|foveolin gastrokine 1 protein-coding chr10-244 chr10 42782531 42782741 + 29.8 0.000 promoter-TSS (NM_014753) promoter-TSS (NM_014753) -159 NM_014753 9790 Hs.10848 NM_014753 ENSG00000165733 BMS1 ACC|BMS1L BMS1 ribosome biogenesis factor protein-coding chr14-247 chr14 74940126 74940336 + 29.8 0.000 Intergenic Intergenic 15533 NM_002632 5228 Hs.252820 NM_002632 ENSG00000119630 PGF D12S1900|PGFL|PIGF|PLGF|PlGF-2|SHGC-10760 placental growth factor protein-coding chr3-183 chr3 47781833 47782043 + 29.8 0.000 promoter-TSS (NM_003074) promoter-TSS (NM_003074) -45 NM_003074 6599 Hs.476179 NM_003074 ENSG00000173473 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding chr14-114 chr14 104865832 104866042 + 29.8 0.000 TTS (NR_162135) TTS (NR_162135) 623 NR_162135 113219454 NR_162135 MIR12121 - microRNA 12121 ncRNA chr10-369 chr10 119449809 119450019 + 29.8 0.000 intron (NM_005308, intron 13 of 15) MER5B|DNA|hAT-Charlie 71942 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr11-274 chr11 2700043 2700253 + 29.8 0.000 promoter-TSS (NR_002728) promoter-TSS (NR_002728) -150 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr2-690 chr2 105324799 105325009 + 29.8 0.000 intron (NR_137328, intron 1 of 12) intron (NR_137328, intron 1 of 12) 4752 NR_137328 9392 Hs.446350 NM_004257 ENSG00000135966 TGFBRAP1 TRAP-1|TRAP1|VPS3 transforming growth factor beta receptor associated protein 1 protein-coding chr17-362 chr17 82339217 82339427 + 29.8 0.000 Intergenic MER41G|LTR|ERV1 -5556 NM_003004 6398 Hs.558009 NM_003004 ENSG00000141574 SECTM1 K12|SECTM secreted and transmembrane 1 protein-coding chr7-235 chr7 50534913 50535123 + 29.8 0.000 intron (NR_033845, intron 1 of 4) intron (NR_033845, intron 1 of 4) 3259 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr3-548 chr3 85589314 85589524 + 29.8 0.000 intron (NM_001256503, intron 2 of 9) intron (NM_001256503, intron 2 of 9) 84360 NM_001256505 253559 Hs.164578 NM_153184 ENSG00000175161 CADM2 IGSF4D|NECL3|Necl-3|SynCAM 2|synCAM2 cell adhesion molecule 2 protein-coding chr13-51 chr13 76991971 76992181 + 29.8 0.000 promoter-TSS (NM_001366624) promoter-TSS (NM_001366624) -5 NM_001366624 1203 Hs.30213 NM_006493 ENSG00000102805 CLN5 - CLN5 intracellular trafficking protein protein-coding chr11-417 chr11 65261751 65261961 + 29.8 0.000 promoter-TSS (NM_002689) promoter-TSS (NM_002689) -106 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr16-377 chr16 57816410 57816620 + 29.8 0.000 3' UTR (NM_001278081, exon 4 of 4) 3' UTR (NM_001278081, exon 4 of 4) 5878 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding chr2-503 chr2 165720561 165720771 + 29.8 0.000 Intergenic Intergenic 73581 NM_004482 2591 Hs.170986 NM_004482 ENSG00000115339 GALNT3 GalNAc-T3|HFTC|HFTC1|HHS polypeptide N-acetylgalactosaminyltransferase 3 protein-coding chr15-285 chr15 69452594 69452804 + 29.8 0.000 promoter-TSS (NM_213725) promoter-TSS (NM_213725) -119 NM_213725 6176 Hs.356502 NM_001003 ENSG00000137818 RPLP1 LP1|P1|RPP1 ribosomal protein lateral stalk subunit P1 protein-coding chr1-1048 chr1 83508629 83508839 + 29.8 0.000 Intergenic Intergenic 62680 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr20-80 chr20 310533 310743 + 29.8 0.000 Intergenic Intergenic 13068 NM_033089 85364 Hs.28608 NM_033089 ENSG00000247315 ZCCHC3 C20orf99 zinc finger CCHC-type containing 3 protein-coding chr11-555 chr11 6481363 6481573 + 29.8 0.000 promoter-TSS (NM_001370411) promoter-TSS (NM_001370411) 11 NM_001242856 23647 Hs.75139 NM_012402 ENSG00000132254 ARFIP2 POR1 ADP ribosylation factor interacting protein 2 protein-coding chr2-467 chr2 47043597 47043807 + 29.8 0.000 intron (NM_001288951, intron 15 of 20) intron (NM_001288951, intron 15 of 20) -101847 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr16-353 chr16 28945674 28945884 + 29.8 0.000 Intergenic Intergenic -5218 NM_032815 84901 Hs.513470 NM_032815 ENSG00000176953 NFATC2IP ESC2|NIP45|RAD60 nuclear factor of activated T cells 2 interacting protein protein-coding chr17-178 chr17 81927838 81928048 + 29.8 0.000 promoter-TSS (NM_002359) promoter-TSS (NM_002359) 114 NR_015454 92659 Hs.336958 NR_015454 ENSG00000265688 MAFG-DT MAFG-AS1 MAFG divergent transcript ncRNA chr10-273 chr10 102226038 102226248 + 29.8 0.000 promoter-TSS (NM_152310) promoter-TSS (NM_152310) -156 NM_152310 83401 Hs.302130 NM_152310 ENSG00000119915 ELOVL3 CIG-30|CIG30 ELOVL fatty acid elongase 3 protein-coding chr1-784 chr1 24415574 24415784 + 29.8 0.000 promoter-TSS (NM_001199012) promoter-TSS (NM_001199012) -71 NM_001330409 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr6-361 chr6 131864061 131864271 + 29.8 0.000 intron (NM_006208, intron 9 of 24) intron (NM_006208, intron 9 of 24) 56146 NM_006208 5167 Hs.527295 NM_006208 ENSG00000197594 ENPP1 ARHR2|COLED|M6S1|NPP1|NPPS|PC-1|PCA1|PDNP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding chr2-833 chr2 144111576 144111786 + 29.8 0.000 intron (NM_001354355, intron 7 of 13) intron (NM_001354355, intron 7 of 13) 99898 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr7-463 chr7 45347889 45348099 + 29.8 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 190203 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr10-158 chr10 79347309 79347519 + 29.8 0.000 promoter-TSS (NM_005729) promoter-TSS (NM_005729) -55 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr15-251 chr15 92149112 92149322 + 29.8 0.000 intron (NR_135775, intron 8 of 10) intron (NR_135775, intron 8 of 10) -244664 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr16-330 chr16 636399 636609 + 29.8 0.000 promoter-TSS (NM_001288710) promoter-TSS (NM_001288710) -138 NM_001288710 84326 Hs.239500 NM_032366 ENSG00000130731 METTL26 C16orf13|JFP2 methyltransferase like 26 protein-coding chr1-564 chr1 26787048 26787258 + 29.8 0.000 promoter-TSS (NM_017837) promoter-TSS (NM_017837) -810 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr22-167 chr22 43187611 43187821 + 29.8 0.000 promoter-TSS (NM_015140) promoter-TSS (NM_015140) -582 NM_015140 23170 Hs.517670 NM_015140 ENSG00000100304 TTLL12 dJ526I14.2 tubulin tyrosine ligase like 12 protein-coding chr6-278 chr6 166567249 166567459 + 29.8 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -22664 NM_001318938 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr10-283 chr10 5684626 5684836 + 29.8 0.000 promoter-TSS (NM_001321785) promoter-TSS (NM_001321785) -107 NM_001321784 54906 Hs.610717 NM_017782 ENSG00000108021 TASOR2 C10orf18|FAM208B|bA318E3.2 transcription activation suppressor family member 2 protein-coding chr6-152 chr6 148513815 148514025 + 29.8 0.000 intron (NM_001346509, intron 1 of 12) intron (NM_001346509, intron 1 of 12) 4769 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr11-324 chr11 3379017 3379227 + 29.8 0.000 promoter-TSS (NM_001130520) promoter-TSS (NM_001130520) 24 NR_040083 7748 Hs.386294 NM_007152 ENSG00000005801 ZNF195 HRF1|ZNFP104 zinc finger protein 195 protein-coding chr11-250 chr11 64305340 64305550 + 29.8 0.000 promoter-TSS (NM_001282450) promoter-TSS (NM_001282450) -79 NM_004451 2101 Hs.110849 NM_004451 ENSG00000173153 ESRRA ERR1|ERRa|ERRalpha|ESRL1|NR3B1 estrogen related receptor alpha protein-coding chr14-263 chr14 61493351 61493561 + 29.8 0.000 intron (NM_006255, intron 10 of 13) MLT1J|LTR|ERVL-MaLR 76738 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr3-522 chr3 106728424 106728634 + 29.8 0.000 Intergenic Intergenic 512109 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr5-360 chr5 115366265 115366475 + 29.8 0.000 Intergenic Intergenic -69716 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding KI270744.1-2 KI270744.1 108303 108513 + 29.8 0.000 NA NA NA NA chr9-347 chr9 18632904 18633114 + 29.8 0.000 intron (NM_052866, intron 5 of 12) intron (NM_052866, intron 5 of 12) 59703 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr3-822 chr3 125481124 125481334 + 29.8 0.000 intron (NM_003794, intron 6 of 13) L2|LINE|L2 38973 NR_073435 8723 Hs.507243 NM_003794 ENSG00000114520 SNX4 ATG24B sorting nexin 4 protein-coding chr1-556 chr1 167797128 167797338 + 29.7 0.000 Intergenic Intergenic 75251 NM_001146191 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr12-277 chr12 111686020 111686230 + 29.7 0.000 promoter-TSS (NM_001136538) promoter-TSS (NM_001136538) 72 NM_001136538 80724 Hs.331141 NM_025247 ENSG00000111271 ACAD10 - acyl-CoA dehydrogenase family member 10 protein-coding chr11-219 chr11 65577495 65577705 + 29.7 0.000 intron (NM_001099409, intron 1 of 18) intron (NM_001099409, intron 1 of 18) 1547 NM_001099409 254102 Hs.502867 NM_001099409 ENSG00000173442 EHBP1L1 - EH domain binding protein 1 like 1 protein-coding chr5-155 chr5 61331945 61332155 + 29.7 0.000 promoter-TSS (NM_020928) promoter-TSS (NM_020928) -208 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr9-389 chr9 108933848 108934058 + 29.7 0.000 promoter-TSS (NM_017832) promoter-TSS (NM_017832) 171 NM_001330749 8518 Hs.494738 NM_003640 ENSG00000070061 ELP1 DYS|FD|IKAP|IKBKAP|IKI3|TOT1 elongator complex protein 1 protein-coding chr5-209 chr5 14926047 14926257 + 29.7 0.000 Intergenic Intergenic -54374 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr7-514 chr7 117098535 117098745 + 29.7 0.000 5' UTR (NM_001369607, exon 2 of 16) 5' UTR (NM_001369607, exon 2 of 16) -7859 NR_109980 93654 Hs.628891 NR_002331 ENSG00000226367 ST7-AS2 ST7AS2|ST7OT2 ST7 antisense RNA 2 ncRNA chr6-189 chr6 24721192 24721402 + 29.7 0.000 Intergenic CpG -2143 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding chr1-392 chr1 1157544 1157754 + 29.7 0.000 Intergenic Intergenic -9455 NR_029639 406984 NR_029639 ENSG00000207730 MIR200B MIRN200B|mir-200b microRNA 200b ncRNA chr15-245 chr15 63610264 63610474 + 29.7 0.000 intron (NM_003922, intron 77 of 77) intron (NM_003922, intron 77 of 77) -9542 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr7-357 chr7 139340337 139340547 + 29.7 0.000 promoter-TSS (NM_197964) promoter-TSS (NM_197964) -8 NR_073060 154791 Hs.718441 NM_197964 ENSG00000164898 FMC1 C7orf55|HSPC268 formation of mitochondrial complex V assembly factor 1 homolog protein-coding chr7-328 chr7 47328145 47328355 + 29.7 0.000 intron (NM_022748, intron 20 of 30) intron (NM_022748, intron 20 of 30) 136553 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr3-219 chr3 49007770 49007980 + 29.7 0.000 TTS (NM_177938) TTS (NM_177938) 270 NM_001320547 11180 Hs.654815 NM_018031 ENSG00000178252 WDR6 - WD repeat domain 6 protein-coding chr7-268 chr7 137343629 137343839 + 29.7 0.000 promoter-TSS (NM_002825) promoter-TSS (NM_002825) -1 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr4-127 chr4 76148240 76148450 + 29.7 0.000 promoter-TSS (NM_017426) promoter-TSS (NM_017426) 52 NM_017426 53371 Hs.430435 NM_017426 ENSG00000138750 NUP54 - nucleoporin 54 protein-coding chr2-330 chr2 46334876 46335086 + 29.7 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 37574 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr14-203 chr14 22956882 22957092 + 29.7 0.000 promoter-TSS (NR_039856) promoter-TSS (NR_039856) 42 NR_039856 100616424 NR_039856 ENSG00000284118 MIR4707 mir-4707 microRNA 4707 ncRNA chr19-676 chr19 18557642 18557852 + 29.7 0.000 promoter-TSS (NM_001171948) promoter-TSS (NM_001171948) -15 NM_001171949 79036 Hs.714548 NM_024069 ENSG00000105700 KXD1 BORCS4|C10orf50|C19orf50|KXDL|MST096|MSTP096 KxDL motif containing 1 protein-coding chr1-1353 chr1 22750378 22750588 + 29.7 0.000 intron (NM_004442, intron 1 of 15) MER113|DNA|hAT-Charlie 30966 NR_039832 100616391 NR_039832 ENSG00000265422 MIR4684 - microRNA 4684 ncRNA chr9-395 chr9 132042506 132042716 + 29.7 0.000 intron (NM_001253881, intron 2 of 6) intron (NM_001253881, intron 2 of 6) 37256 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr1-480 chr1 44811750 44811960 + 29.7 0.000 intron (NM_001136537, intron 3 of 7) intron (NM_001136537, intron 3 of 7) 3373 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB domain containing 19 protein-coding chr9-373 chr9 136001159 136001369 + 29.7 0.000 Intergenic Intergenic -39891 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr6-261 chr6 144377638 144377848 + 29.7 0.000 intron (NM_007124, intron 1 of 73) MamRTE1|LINE|RTE-BovB -27912 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr6-99 chr6 28124554 28124764 + 29.7 0.000 promoter-TSS (NM_001320557) promoter-TSS (NM_001320557) 50 NM_001320555 80345 Hs.656641 NM_025231 ENSG00000196812 ZSCAN16 ZNF392|ZNF435|dJ265C24.3 zinc finger and SCAN domain containing 16 protein-coding chr6-191 chr6 41846720 41846930 + 29.7 0.000 intron (NM_001286554, intron 1 of 5) L1MB2|LINE|L1 24812 NM_001286554 25862 Hs.593575 NM_018561 ENSG00000164663 USP49 - ubiquitin specific peptidase 49 protein-coding chr12-483 chr12 45415524 45415734 + 29.7 0.000 intron (NM_001025356, intron 16 of 19) intron (NM_001025356, intron 16 of 19) 122939 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr17-382 chr17 35567879 35568089 + 29.7 0.000 promoter-TSS (NR_135479) promoter-TSS (NR_135479) -130 NR_135479 105371743 NR_135479 SNHG30 LINC02001 small nucleolar RNA host gene 30 ncRNA chr5-170 chr5 137754472 137754682 + 29.7 0.000 promoter-TSS (NM_006805) promoter-TSS (NM_006805) -214 NM_006805 10949 Hs.96996 NM_006805 ENSG00000177733 HNRNPA0 HNRPA0 heterogeneous nuclear ribonucleoprotein A0 protein-coding chr10-198 chr10 96513784 96513994 + 29.7 0.000 promoter-TSS (NM_012465) promoter-TSS (NM_012465) 37 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr4-264 chr4 87038983 87039193 + 29.7 0.000 intron (NM_001313960, intron 1 of 17) intron (NM_001313960, intron 1 of 17) 32087 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr13-104 chr13 33520207 33520417 + 29.7 0.000 intron (NM_001243476, intron 4 of 17) intron (NM_001243476, intron 4 of 17) 156482 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr1-220 chr1 205749436 205749646 + 29.7 0.000 intron (NM_022731, intron 1 of 6) CpG 641 NM_022731 64710 Hs.213061 NM_022731 ENSG00000069275 NUCKS1 JC7|NUCKS nuclear casein kinase and cyclin dependent kinase substrate 1 protein-coding chr1-1025 chr1 236394059 236394269 + 29.7 0.000 promoter-TSS (NM_145861) promoter-TSS (NM_145861) -122 NM_145861 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr13-154 chr13 46575899 46576109 + 29.7 0.000 intron (NM_001164213, intron 1 of 18) Tigger19a|DNA|TcMar-Tigger 22834 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr8-325 chr8 124752000 124752210 + 29.7 0.000 Intergenic Intergenic -23598 NM_014751 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr2-982 chr2 85499126 85499336 + 29.7 0.000 Intergenic AluJb|SINE|Alu 39655 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr19-626 chr19 37594809 37595019 + 29.7 0.000 promoter-TSS (NM_016536) promoter-TSS (NM_016536) 38 NM_001172226 163255 Hs.728927 NM_152606 ENSG00000171817 ZNF540 Nbla10512 zinc finger protein 540 protein-coding chr7-247 chr7 151113461 151113671 + 29.7 0.000 intron (NM_001350103, intron 1 of 18) intron (NM_001350103, intron 1 of 18) -1072 NM_001308305 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr1-1787 chr1 42259564 42259774 + 29.6 0.000 intron (NM_001198850, intron 4 of 12) intron (NM_001198850, intron 4 of 12) 75286 NM_001198851 22887 Hs.26023 NM_014947 ENSG00000198815 FOXJ3 - forkhead box J3 protein-coding chr9-152 chr9 15422749 15422959 + 29.6 0.000 promoter-TSS (NR_161435) promoter-TSS (NR_161435) -22 NR_161447 6619 Hs.546299 NM_003084 ENSG00000164975 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex polypeptide 3 protein-coding chr14-288 chr14 60562209 60562419 + 29.6 0.000 Intergenic Intergenic 53168 NM_007374 4990 Hs.194756 NM_007374 ENSG00000184302 SIX6 MCOPCT2|ODRMD|OPTX2|Six9 SIX homeobox 6 protein-coding chr15-131 chr15 92900202 92900412 + 29.6 0.000 promoter-TSS (NM_001271) promoter-TSS (NM_001271) -17 NM_001271 1106 Hs.220864 NM_001271 ENSG00000173575 CHD2 EEOC chromodomain helicase DNA binding protein 2 protein-coding chr19-463 chr19 2337454 2337664 + 29.6 0.000 exon (NM_152988, exon 3 of 15) exon (NM_152988, exon 3 of 15) 8875 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr7-619 chr7 137975397 137975607 + 29.6 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 22154 NR_161346 100130880 Hs.712161 NR_161346 CREB3L2-AS1 - CREB3L2 antisense RNA 1 ncRNA chr2-310 chr2 56741572 56741782 + 29.6 0.000 Intergenic Intergenic -555907 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr11-707 chr11 85686026 85686236 + 29.6 0.000 promoter-TSS (NM_152723) promoter-TSS (NM_152723) 64 NM_152723 220388 Hs.376241 NM_152723 ENSG00000179071 CCDC89 - coiled-coil domain containing 89 protein-coding chr4-158 chr4 39638879 39639089 + 29.6 0.000 promoter-TSS (NM_001317896) promoter-TSS (NM_001317896) -119 NM_001317896 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr8-184 chr8 42152731 42152941 + 29.6 0.000 promoter-TSS (NM_001134296) promoter-TSS (NM_001134296) -110 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr16-765 chr16 72291636 72291846 + 29.6 0.000 intron (NR_126330, intron 9 of 13) intron (NR_126330, intron 9 of 13) -119291 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr17-1204 chr17 78651642 78651852 + 29.6 0.000 Intergenic L1ME3G|LINE|L1 -19690 NR_110849 101928710 Hs.464224 NR_110848 ENSG00000267123 SCAT1 LINC02081|XLOC_012582 S-phase cancer associated transcript 1 ncRNA chr5-212 chr5 43105674 43105884 + 29.6 0.000 Intergenic Intergenic -15135 NM_001330706 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr13-194 chr13 60043433 60043643 + 29.6 0.000 intron (NM_001258367, intron 2 of 25) intron (NM_001258367, intron 2 of 25) 30235 NR_051994 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr5-334 chr5 176537832 176538042 + 29.6 0.000 promoter-TSS (NM_014901) promoter-TSS (NM_014901) -535 NM_014901 22838 Hs.434888 NM_014901 ENSG00000146083 RNF44 - ring finger protein 44 protein-coding chr11-298 chr11 762765 762975 + 29.6 0.000 intron (NM_006755, intron 4 of 7) intron (NM_006755, intron 4 of 7) 14617 NM_001318824 347862 Hs.218362 NM_182612 ENSG00000177225 GATD1 PDDC1 glutamine amidotransferase like class 1 domain containing 1 protein-coding chr2-440 chr2 117814474 117814684 + 29.6 0.000 promoter-TSS (NM_006773) promoter-TSS (NM_006773) -112 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr8-352 chr8 66535798 66536008 + 29.6 0.000 Intergenic Intergenic 42337 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 VXN C8orf46 vexin protein-coding chr13-113 chr13 113584377 113584587 + 29.6 0.000 promoter-TSS (NR_026580) promoter-TSS (NR_026580) -206 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr6-185 chr6 132814375 132814585 + 29.6 0.000 promoter-TSS (NR_002434) promoter-TSS (NR_002434) -89 NM_001016 6206 Hs.546289 NM_001016 ENSG00000112306 RPS12 S12 ribosomal protein S12 protein-coding chr6-295 chr6 154653934 154654144 + 29.6 0.000 Intergenic Intergenic -79339 NM_001286189 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr19-310 chr19 10461183 10461393 + 29.6 0.000 intron (NM_001111309, intron 11 of 14) intron (NM_001111309, intron 11 of 14) 8356 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr11-794 chr11 65311004 65311214 + 29.6 0.000 Intergenic Intergenic -3757 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr12-280 chr12 132986140 132986350 + 29.6 0.000 promoter-TSS (NM_001330513) promoter-TSS (NM_001330513) -122 NM_001330514 7574 Hs.489608 NM_019591 ENSG00000198393 ZNF26 HEL-179|KOX20 zinc finger protein 26 protein-coding chr2-602 chr2 54571030 54571240 + 29.6 0.000 intron (NM_178313, intron 1 of 30) intron (NM_178313, intron 1 of 30) 12741 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr17-740 chr17 1201215 1201425 + 29.6 0.000 intron (NM_001322841, intron 1 of 22) MIRb|SINE|MIR -14048 NM_001159746 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr21-52 chr21 37220845 37221055 + 29.6 0.000 non-coding (NR_026719, exon 3 of 3) non-coding (NR_026719, exon 3 of 3) 12447 NR_026719 257203 Hs.505159 NM_148675 ENSG00000230366 DSCR9 NCRNA00038 Down syndrome critical region 9 ncRNA chr19-311 chr19 38336374 38336584 + 29.6 0.000 intron (NM_001330496, intron 1 of 27) CpG 649 NM_021185 57828 Hs.324335 NM_021185 ENSG00000099338 CATSPERG C19orf15 cation channel sperm associated auxiliary subunit gamma protein-coding chr11-293 chr11 65560626 65560836 + 29.6 0.000 Intergenic L2c|LINE|L2 -2503 NM_001164266 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr1-871 chr1 203795434 203795644 + 29.6 0.000 promoter-TSS (NM_001350262) promoter-TSS (NM_001350262) 2 NM_001319238 9877 Hs.532399 NM_014827 ENSG00000058673 ZC3H11A ZC3HDC11A zinc finger CCCH-type containing 11A protein-coding chr19-762 chr19 35716901 35717111 + 29.6 0.000 TTS (NM_001316903) TTS (NM_001316903) -1013 NM_014727 9757 Hs.92236 NM_014727 ENSG00000272333 KMT2B CXXC10|DYT28|HRX2|MLL1B|MLL2|MLL4|TRX2|WBP-7|WBP7 lysine methyltransferase 2B protein-coding chr5-127 chr5 149551463 149551673 + 29.6 0.000 promoter-TSS (NM_001892) promoter-TSS (NM_001892) -129 NM_001271741 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding chr17-605 chr17 82536980 82537190 + 29.6 0.000 intron (NM_004514, intron 1 of 8) intron (NM_004514, intron 1 of 8) 17353 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr8-157 chr8 124772150 124772360 + 29.6 0.000 Intergenic Intergenic -43748 NM_014751 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr2-175 chr2 73071545 73071755 + 29.6 0.000 promoter-TSS (NM_001330404) promoter-TSS (NM_001330404) 186 NM_001330400 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr19-811 chr19 42081649 42081859 + 29.6 0.000 TTS (NM_022752) TTS (NM_022752) 5588 NM_022752 64763 Hs.13323 NM_022752 ENSG00000105732 ZNF574 FP972 zinc finger protein 574 protein-coding chr8-144 chr8 94823276 94823486 + 29.6 0.000 promoter-TSS (NM_017864) promoter-TSS (NM_017864) 91 NR_073444 55656 Hs.727669 NM_017864 ENSG00000164941 INTS8 C8orf52|INT8 integrator complex subunit 8 protein-coding chr9-348 chr9 34620427 34620637 + 29.6 0.000 promoter-TSS (NM_001281426) promoter-TSS (NM_001281426) -9 NM_001281425 11258 Hs.511768 NM_007234 ENSG00000137100 DCTN3 DCTN-22|DCTN22 dynactin subunit 3 protein-coding chr6-198 chr6 2960332 2960542 + 29.6 0.000 intron (NM_001297700, intron 1 of 6) intron (NM_001297700, intron 1 of 6) 1693 NM_001271825 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr14-318 chr14 55541287 55541497 + 29.6 0.000 Intergenic L4_A_Mam|LINE|RTE-X 38700 NR_027123 100129075 Hs.633724 NR_027123 ENSG00000186615 KTN1-AS1 C14orf33|MYCLo-3 KTN1 antisense RNA 1 ncRNA chr7-371 chr7 130205247 130205457 + 29.6 0.000 promoter-TSS (NM_032842) promoter-TSS (NM_032842) 54 NM_032842 84928 Hs.267245 NM_032842 ENSG00000146842 TMEM209 NET31 transmembrane protein 209 protein-coding chr10-238 chr10 93747078 93747288 + 29.6 0.000 Intergenic Intergenic -10626 NR_131777 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr9-333 chr9 134065871 134066081 + 29.6 0.000 intron (NM_007371, intron 1 of 11) intron (NM_007371, intron 1 of 11) 2050 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr4-291 chr4 99868179 99868389 + 29.6 0.000 3' UTR (NM_014395, exon 9 of 9) 3' UTR (NM_014395, exon 9 of 9) 26143 NM_021970 8649 Hs.433332 NM_021970 ENSG00000109270 LAMTOR3 MAP2K1IP1|MAPBP|MAPKSP1|MP1|PRO0633|Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding chr18-26 chr18 21704667 21704877 + 29.6 0.000 promoter-TSS (NM_001308256) promoter-TSS (NM_001308256) 2 NM_001308256 171586 Hs.397978 NM_138340 ENSG00000158201 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding chr14-172 chr14 90331976 90332186 + 29.6 0.000 promoter-TSS (NM_017970) promoter-TSS (NM_017970) -140 NM_017970 55051 Hs.528131 NM_017970 ENSG00000119720 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding chr4-287 chr4 48360597 48360807 + 29.6 0.000 intron (NM_020846, intron 1 of 7) L1MB7|LINE|L1 19173 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr2-994 chr2 172655373 172655583 + 29.6 0.000 Intergenic Intergenic -80367 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr3-167 chr3 179451343 179451553 + 29.6 0.000 promoter-TSS (NM_021629) promoter-TSS (NM_021629) 22 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr20-141 chr20 57718522 57718732 + 29.6 0.000 Intergenic CpG -7091 NM_199171 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr11-379 chr11 62646624 62646834 + 29.6 0.000 promoter-TSS (NM_198334) promoter-TSS (NM_198334) -3 NM_001278194 23193 Hs.595071 NM_014610 ENSG00000089597 GANAB G2AN|GIIA|GLUII|PKD3 glucosidase II alpha subunit protein-coding chr2-738 chr2 214069419 214069629 + 29.6 0.000 intron (NR_047660, intron 12 of 14) intron (NR_047660, intron 12 of 14) 311457 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr20-266 chr20 31595565 31595775 + 29.6 0.000 Intergenic L2a|LINE|L2 -9619 NM_181353 3397 Hs.504609 NM_002165 ENSG00000125968 ID1 ID|bHLHb24 inhibitor of DNA binding 1, HLH protein protein-coding chr19-197 chr19 40433926 40434136 + 29.5 0.000 Intergenic CpG -8039 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1|TRIPBR1 SERTA domain containing 1 protein-coding chr16-361 chr16 1311938 1312148 + 29.5 0.000 intron (NM_003345, intron 1 of 6) intron (NM_003345, intron 1 of 6) 2407 NM_003345 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr4-97 chr4 102868838 102869048 + 29.5 0.000 promoter-TSS (NM_001008388) promoter-TSS (NM_001008388) -49 NM_001008388 493856 Hs.444955 NM_001008388 ENSG00000145354 CISD2 ERIS|Miner1|NAF-1|WFS2|ZCD2 CDGSH iron sulfur domain 2 protein-coding chr2-671 chr2 234680143 234680353 + 29.5 0.000 Intergenic Intergenic -2420 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr16-507 chr16 81127134 81127344 + 29.5 0.000 intron (NM_052892, intron 37 of 43) LTR40c|LTR|ERVL -30844 NR_033249 2653 Hs.546256 NM_004483 ENSG00000140905 GCSH GCE|NKH glycine cleavage system protein H protein-coding chr6-84 chr6 43143487 43143697 + 29.5 0.000 exon (NM_001270398, exon 14 of 20) exon (NM_001270398, exon 14 of 20) -27677 NM_003131 6722 Hs.520140 NM_003131 ENSG00000112658 SRF MCM1 serum response factor protein-coding chr5-264 chr5 119303059 119303269 + 29.5 0.000 intron (NM_001077654, intron 1 of 1) intron (NM_001077654, intron 1 of 1) -30011 NM_001286814 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr19-724 chr19 11988836 11989046 + 29.5 0.000 intron (NR_134929, intron 1 of 2) LTR13_|LTR|ERVK 1324 NR_134929 101928464 Hs.631643 NR_134927 ENSG00000219665 ZNF433-AS1 - ZNF433 and ZNF878 antisense RNA 1 ncRNA chr4-100 chr4 2413379 2413589 + 29.5 0.000 intron (NM_020972, intron 1 of 12) intron (NM_020972, intron 1 of 12) 5161 NM_001172656 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr14-257 chr14 99654304 99654514 + 29.5 0.000 intron (NM_001329411, intron 3 of 8) LTR33A_|LTR|ERVL 9299 NM_032425 84439 Hs.131714 NM_032425 ENSG00000182218 HHIPL1 KIAA1822|UNQ9245 HHIP like 1 protein-coding chr8-262 chr8 126876741 126876951 + 29.5 0.000 Intergenic Intergenic -136308 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr10-552 chr10 87082371 87082581 + 29.5 0.000 intron (NM_001318906, intron 1 of 13) intron (NM_001318906, intron 1 of 13) 11611 NM_001318902 2746 Hs.500409 NM_005271 ENSG00000148672 GLUD1 GDH|GDH1|GLUD glutamate dehydrogenase 1 protein-coding chr6-232 chr6 136289772 136289982 + 29.5 0.000 promoter-TSS (NM_001301038) promoter-TSS (NM_001301038) -26 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr1-765 chr1 63651215 63651425 + 29.5 0.000 intron (NM_001172818, intron 8 of 10) intron (NM_001172818, intron 8 of 10) 28104 NM_001172818 5236 Hs.1869 NM_002633 ENSG00000079739 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding chr2-308 chr2 28583964 28584174 + 29.5 0.000 intron (NR_138141, intron 5 of 35) intron (NR_138141, intron 5 of 35) 17712 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr17-321 chr17 80892146 80892356 + 29.5 0.000 intron (NM_020761, intron 18 of 33) intron (NM_020761, intron 18 of 33) 78962 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr22-205 chr22 42621659 42621869 + 29.5 0.000 intron (NM_007326, intron 8 of 8) intron (NM_007326, intron 8 of 8) 6519 NR_029422 267010 Hs.574857 NR_029422 ENSG00000276027 RNU12 RNU12-1|RNU12L|RNU12P|dJ222E13.7 RNA, U12 small nuclear snRNA chr19-593 chr19 39372581 39372791 + 29.5 0.000 intron (NM_018028, intron 6 of 15) intron (NM_018028, intron 6 of 15) 18420 NM_019088 54623 Hs.466714 NM_019088 ENSG00000006712 PAF1 F23149_1|PD2 PAF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr1-410 chr1 27392395 27392605 + 29.5 0.000 promoter-TSS (NM_005281) promoter-TSS (NM_005281) -122 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chr1-370 chr1 2311550 2311760 + 29.5 0.000 Intergenic Intergenic 41006 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr17-195 chr17 30824547 30824757 + 29.5 0.000 promoter-TSS (NM_015986) promoter-TSS (NM_015986) 40 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr19-505 chr19 35154979 35155189 + 29.5 0.000 TTS (NM_022006) TTS (NM_022006) 349 NM_001320913 53827 Hs.333418 NM_014164 ENSG00000089327 FXYD5 DYSAD|HSPC113|IWU1|KCT1|OIT2|PRO6241|RIC FXYD domain containing ion transport regulator 5 protein-coding chr3-165 chr3 57227646 57227856 + 29.5 0.000 promoter-TSS (NM_012096) promoter-TSS (NM_012096) 22 NM_012096 26060 Hs.476415 NM_012096 ENSG00000157500 APPL1 APPL|DIP13alpha|MODY14 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 protein-coding chr1-415 chr1 153658656 153658866 + 29.5 0.000 promoter-TSS (NM_012437) promoter-TSS (NM_012437) 58 NM_012437 23557 Hs.32018 NM_012437 ENSG00000143553 SNAPIN BLOC1S7|BLOS7|BORCS3|SNAPAP SNAP associated protein protein-coding chr7-336 chr7 87876299 87876509 + 29.5 0.000 promoter-TSS (NM_006716) promoter-TSS (NM_006716) -44 NM_018843 55972 Hs.208414 NM_018843 ENSG00000075303 SLC25A40 MCFP solute carrier family 25 member 40 protein-coding chr4-275 chr4 105399809 105400019 + 29.5 0.000 intron (NM_176867, intron 1 of 5) Tigger7|DNA|TcMar-Tigger -47033 NR_126420 104384744 Hs.624109 NR_126420 TET2-AS1 - TET2 antisense RNA 1 ncRNA chr2-645 chr2 174442966 174443176 + 29.5 0.000 intron (NM_001267051, intron 12 of 14) intron (NM_001267051, intron 12 of 14) 43958 NM_152529 151556 Hs.516604 NM_152529 ENSG00000163328 GPR155 DEP.7|DEPDC3|PGR22 G protein-coupled receptor 155 protein-coding chr2-827 chr2 84702016 84702226 + 29.5 0.000 intron (NM_001370, intron 49 of 76) intron (NM_001370, intron 49 of 76) 178963 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr4-269 chr4 3452156 3452366 + 29.5 0.000 Intergenic LTR24C|LTR|ERV1 10293 NM_001297439 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr3-621 chr3 183665096 183665306 + 29.5 0.000 intron (NM_001349426, intron 4 of 6) intron (NM_001349426, intron 4 of 6) 29578 NM_001349414 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding chr15-153 chr15 101167867 101168077 + 29.5 0.000 Intergenic Intergenic 84076 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr7-374 chr7 5634315 5634525 + 29.5 0.000 intron (NM_207111, intron 15 of 16) intron (NM_207111, intron 15 of 16) 41604 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr8-291 chr8 126580000 126580210 + 29.5 0.000 Intergenic Intergenic -21627 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr1-367 chr1 150579638 150579848 + 29.5 0.000 promoter-TSS (NM_182763) promoter-TSS (NM_182763) -5 NM_182763 4170 Hs.632486 NM_021960 ENSG00000143384 MCL1 BCL2L3|EAT|MCL1-ES|MCL1L|MCL1S|Mcl-1|TM|bcl2-L-3|mcl1/EAT MCL1 apoptosis regulator, BCL2 family member protein-coding chr3-207 chr3 48446714 48446924 + 29.5 0.000 promoter-TSS (NM_032166) promoter-TSS (NM_032166) 40 NR_153405 111822955 NR_153405 ENSG00000164053 ATRIP-TREX1 - ATRIP-TREX1 readthrough ncRNA chr14-304 chr14 54881943 54882153 + 29.5 0.000 intron (NM_001024071, intron 1 of 5) intron (NM_001024071, intron 1 of 5) -3855 NR_036194 100422984 NR_036194 ENSG00000265432 MIR4308 - microRNA 4308 ncRNA chr7-300 chr7 43729417 43729627 + 29.5 0.000 promoter-TSS (NM_001350928) promoter-TSS (NM_001350928) 1 NM_001371307 chr1-683 chr1 185373866 185374076 + 29.5 0.000 Intergenic Intergenic -38932 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr7-710 chr7 47623308 47623518 + 29.5 0.000 non-coding (NR_108090, exon 2 of 4) non-coding (NR_108090, exon 2 of 4) 1474 NR_108090 101929086 Hs.563487 NR_108090 ENSG00000236078 LINC01447 - long intergenic non-protein coding RNA 1447 ncRNA chr11-248 chr11 12287129 12287339 + 29.5 0.000 intron (NM_032867, intron 1 of 8) intron (NM_032867, intron 1 of 8) 334 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr16-302 chr16 2752367 2752577 + 29.5 0.000 promoter-TSS (NM_016333) promoter-TSS (NM_016333) 128 NR_027275 100128788 Hs.311208 NR_027274 ENSG00000205913 SRRM2-AS1 - SRRM2 antisense RNA 1 ncRNA chr1-1166 chr1 97850076 97850286 + 29.5 0.000 intron (NM_000110, intron 2 of 22) intron (NM_000110, intron 2 of 22) 53260 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr1-747 chr1 111592788 111592998 + 29.5 0.000 intron (NM_001370216, intron 1 of 7) intron (NM_001370216, intron 1 of 7) 15425 NR_034126 100129269 Hs.689728 NR_034126 LINC01160 - long intergenic non-protein coding RNA 1160 ncRNA chr1-1016 chr1 151327663 151327873 + 29.5 0.000 promoter-TSS (NM_001369624) promoter-TSS (NM_001369624) -53 NM_001369628 5298 Hs.632465 NM_002651 ENSG00000143393 PI4KB NPIK|PI4K-BETA|PI4K92|PI4KBETA|PI4KIIIBETA|PIK4CB phosphatidylinositol 4-kinase beta protein-coding chr9-230 chr9 137055684 137055894 + 29.5 0.000 Intergenic Intergenic -1728 NM_001246 954 Hs.123036 NM_001246 ENSG00000054179 ENTPD2 CD39L1|NTPDase-2 ectonucleoside triphosphate diphosphohydrolase 2 protein-coding chr5-397 chr5 81420379 81420589 + 29.3 0.000 3' UTR (NM_001256732, exon 17 of 17) 3' UTR (NM_001256732, exon 17 of 17) -26350 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr2-652 chr2 20514950 20515160 + 29.3 0.000 Intergenic Intergenic -13531 NR_157978 107985856 NR_157978 LOC107985856 - uncharacterized LOC107985856 ncRNA chr16-154 chr16 89247440 89247650 + 29.3 0.000 Intergenic CpG 29842 NM_182531 197320 Hs.647385 NM_182531 ENSG00000170100 ZNF778 - zinc finger protein 778 protein-coding chr1-660 chr1 15526577 15526787 + 29.3 0.000 promoter-TSS (NM_001287811) promoter-TSS (NM_001287811) -131 NM_001287811 23341 Hs.655410 NM_015291 ENSG00000116138 DNAJC16 - DnaJ heat shock protein family (Hsp40) member C16 protein-coding chr17-271 chr17 30378992 30379202 + 29.3 0.000 exon (NM_001304, exon 1 of 21) exon (NM_001304, exon 1 of 21) 170 NM_001304 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr2-389 chr2 166239735 166239945 + 29.3 0.000 intron (NM_001365536, intron 19 of 26) intron (NM_001365536, intron 19 of 26) -90679 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr6-563 chr6 151330328 151330538 + 29.3 0.000 intron (NM_144497, intron 1 of 2) intron (NM_144497, intron 1 of 2) 4902 NM_144497 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr2-224 chr2 47906696 47906906 + 29.3 0.000 Intergenic CpG -1008 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr11-232 chr11 43644052 43644262 + 29.3 0.000 Intergenic Intergenic -36581 NM_016142 51144 Hs.132513 NM_016142 ENSG00000149084 HSD17B12 KAR|SDR12C1 hydroxysteroid 17-beta dehydrogenase 12 protein-coding chr15-214 chr15 39908191 39908401 + 29.3 0.000 intron (NM_001271854, intron 1 of 3) intron (NM_001271854, intron 1 of 3) 12596 NM_007223 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr10-183 chr10 103772501 103772711 + 29.3 0.000 intron (NM_014631, intron 2 of 13) intron (NM_014631, intron 2 of 13) 25827 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr19-371 chr19 55599209 55599419 + 29.3 0.000 promoter-TSS (NM_153219) promoter-TSS (NM_153219) 203 NM_032836 84922 Hs.515617 NM_032836 ENSG00000179943 FIZ1 ZNF798 FLT3 interacting zinc finger 1 protein-coding chr3-342 chr3 179604702 179604912 + 29.3 0.000 promoter-TSS (NM_002492) promoter-TSS (NM_002492) 13 NM_002492 4711 Hs.730674 NM_002492 ENSG00000136521 NDUFB5 CISGDH|SGDH NADH:ubiquinone oxidoreductase subunit B5 protein-coding chr17-176 chr17 74748472 74748682 + 29.3 0.000 promoter-TSS (NR_037409) promoter-TSS (NR_037409) -36 NR_037409 100500847 NR_037409 ENSG00000284186 MIR3615 mir-3615 microRNA 3615 ncRNA chr20-295 chr20 2133662 2133872 + 29.3 0.000 intron (NM_080836, intron 3 of 3) intron (NM_080836, intron 3 of 3) 31940 NM_080836 140901 Hs.100057 NM_080836 ENSG00000125834 STK35 CLIK1|STK35L1 serine/threonine kinase 35 protein-coding chr9-452 chr9 79571623 79571833 + 29.3 0.000 promoter-TSS (NM_001282760) promoter-TSS (NM_001282760) -45 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr7-456 chr7 5626026 5626236 + 29.3 0.000 intron (NM_207111, intron 15 of 16) L3|LINE|CR1 33315 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr17-150 chr17 17840222 17840432 + 29.3 0.000 Intergenic CpG -3316 NM_004176 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr8-271 chr8 26641778 26641988 + 29.3 0.000 intron (NM_001244604, intron 8 of 13) UCON89|DNA|hAT? 63478 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr9-95 chr9 135500500 135500710 + 29.3 0.000 promoter-TSS (NM_016034) promoter-TSS (NM_016034) -77 NR_051970 51116 Hs.382044 NM_016034 ENSG00000122140 MRPS2 CGI-91|COXPD36|MRP-S2|S2mt mitochondrial ribosomal protein S2 protein-coding chr7-397 chr7 6516402 6516612 + 29.3 0.000 intron (NM_001145118, intron 7 of 21) LTR13_|LTR|ERVK -32355 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr22-175 chr22 28772743 28772953 + 29.3 0.000 promoter-TSS (NM_001284265) promoter-TSS (NM_001284265) 153 NM_173510 150275 Hs.406460 NM_173510 ENSG00000159873 CCDC117 dJ366L4.1 coiled-coil domain containing 117 protein-coding chr2-191 chr2 42810178 42810388 + 29.3 0.000 Intergenic CpG -17700 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr10-286 chr10 43574369 43574579 + 29.3 0.000 5' UTR (NM_001324348, exon 1 of 2) 5' UTR (NM_001324348, exon 1 of 2) 142 NM_001324350 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding chr17-743 chr17 13462272 13462482 + 29.3 0.000 Intergenic Intergenic 81269 NR_031679 100302287 NR_031679 ENSG00000221698 MIR548H3 MIR548H-3|MIRN548H3|hsa-mir-548h-3 microRNA 548h-3 ncRNA chr7-325 chr7 134779527 134779737 + 29.3 0.000 promoter-TSS (NM_004342) promoter-TSS (NM_004342) -2 NM_033157 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr11-562 chr11 86174350 86174560 + 29.3 0.000 Intergenic Intergenic -69929 NM_001308007 8726 Hs.503510 NM_003797 ENSG00000074266 EED COGIS|HEED|WAIT1 embryonic ectoderm development protein-coding chr11-1118 chr11 7192876 7193086 + 29.3 0.000 Intergenic L1MA9|LINE|L1 -41785 NR_031683 100313774 NR_031683 ENSG00000221703 MIR302E MIRN302E microRNA 302e ncRNA chr1-257 chr1 95072591 95072801 + 29.3 0.000 intron (NM_144988, intron 1 of 3) CpG 255 NR_131032 199857 Hs.408927 NM_144988 ENSG00000172339 ALG14 CMS15 ALG14 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr10-345 chr10 26474102 26474312 + 29.3 0.000 intron (NM_019043, intron 2 of 14) intron (NM_019043, intron 2 of 14) 35866 NM_019043 54518 Hs.310421 NM_019043 ENSG00000077420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta precursor protein binding family B member 1 interacting protein protein-coding chr6-516 chr6 106182068 106182278 + 29.3 0.000 Intergenic L2b|LINE|L2 83232 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr21-27 chr21 46635461 46635671 + 29.3 0.000 promoter-TSS (NM_001286677) promoter-TSS (NM_001286677) -29 NM_001535 3275 Hs.154163 NM_001535 ENSG00000160310 PRMT2 HRMT1L1 protein arginine methyltransferase 2 protein-coding chr3-370 chr3 67526297 67526507 + 29.3 0.000 intron (NM_001177599, intron 4 of 10) MER30|DNA|hAT-Charlie 128212 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr11-246 chr11 134034101 134034311 + 29.3 0.000 intron (NR_027276, intron 1 of 2) intron (NR_027276, intron 1 of 2) 1934 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LINC02731 - long intergenic non-protein coding RNA 2731 ncRNA chr10-256 chr10 30152079 30152289 + 29.3 0.000 Intergenic L1PB1|LINE|L1 -36690 NM_001350021 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr8-195 chr8 30279701 30279911 + 29.3 0.000 Intergenic Intergenic -104695 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr16-259 chr16 30558403 30558613 + 29.3 0.000 promoter-TSS (NM_001172679) promoter-TSS (NM_001172679) -134 NM_001172679 92595 Hs.132227 NM_033410 ENSG00000169951 ZNF764 - zinc finger protein 764 protein-coding chr3-478 chr3 40044602 40044812 + 29.3 0.000 intron (NM_001284425, intron 3 of 15) intron (NM_001284425, intron 3 of 15) -55304 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr11-756 chr11 11813427 11813637 + 29.3 0.000 Intergenic Intergenic -27891 NM_017944 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr5-498 chr5 169935105 169935315 + 29.3 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 45285 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr16-231 chr16 85615949 85616159 + 29.3 0.000 intron (NM_001278184, intron 1 of 14) intron (NM_001278184, intron 1 of 14) 2732 NM_001278184 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr15-154 chr15 48811052 48811262 + 29.3 0.000 promoter-TSS (NM_001194998) promoter-TSS (NM_001194998) -88 NM_014985 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr7-211 chr7 135211622 135211832 + 29.3 0.000 promoter-TSS (NM_001362736) promoter-TSS (NM_001362736) -201 NM_014149 29062 Hs.459858 NM_014149 ENSG00000105875 WDR91 HSPC049|SORF-1|SORF1 WD repeat domain 91 protein-coding chr1-617 chr1 100351482 100351692 + 29.3 0.000 promoter-TSS (NM_033312) promoter-TSS (NM_033312) -880 NM_001319212 8556 Hs.127411 NM_003672 ENSG00000079335 CDC14A DFNB105|DFNB32|DFNB35|cdc14|hCDC14 cell division cycle 14A protein-coding chr22-225 chr22 44448453 44448663 + 29.3 0.000 Intergenic Intergenic 5231 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 - long intergenic non-protein coding RNA 1656 ncRNA chr11-643 chr11 64748396 64748606 + 29.3 0.000 intron (NM_005609, intron 17 of 19) L1ME4a|LINE|L1 -3045 NM_153819 10235 Hs.99491 NM_005825 ENSG00000068831 RASGRP2 CALDAG-GEFI|CDC25L RAS guanyl releasing protein 2 protein-coding chr10-365 chr10 79113279 79113489 + 29.3 0.000 intron (NM_020338, intron 1 of 24) intron (NM_020338, intron 1 of 24) 44418 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr6-313 chr6 63806216 63806426 + 29.3 0.000 promoter-TSS (NR_157848) promoter-TSS (NR_157848) -515 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr11-291 chr11 69656118 69656328 + 29.3 0.000 Intergenic Intergenic 15118 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr4-272 chr4 39540231 39540441 + 29.3 0.000 intron (NR_047679, intron 2 of 4) HERVK3-int|LTR|ERVK 12497 NR_047679 100885776 Hs.640769 NR_047679 ENSG00000249348 UGDH-AS1 - UGDH antisense RNA 1 ncRNA chr10-317 chr10 80662919 80663129 + 29.3 0.000 Intergenic Intergenic 13227 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr2-558 chr2 37614204 37614414 + 29.3 0.000 Intergenic Intergenic 57890 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr5-166 chr5 39424950 39425160 + 29.3 0.000 promoter-TSS (NM_001343) promoter-TSS (NM_001343) -75 NM_001343 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB adaptor protein 2 protein-coding chr6-122 chr6 90218347 90218557 + 29.3 0.000 intron (NM_001170794, intron 1 of 6) intron (NM_001170794, intron 1 of 6) 78391 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr13-16 chr13 114234875 114235085 + 29.3 0.000 promoter-TSS (NM_001318518) promoter-TSS (NM_001318518) 83 NM_001078645 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chrX-53 chrX 30889323 30889533 + 29.3 0.000 promoter-TSS (NM_152787) promoter-TSS (NM_152787) -174 NM_152787 257397 Hs.188256 NM_152787 ENSG00000157625 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 protein-coding chr21-47 chr21 25734920 25735130 + 29.3 0.000 promoter-TSS (NM_002040) promoter-TSS (NM_002040) 53 NM_001197297 2551 Hs.473470 NM_002040 ENSG00000154727 GABPA E4TF1-60|E4TF1A|NFT2|NRF2|NRF2A|RCH04A07 GA binding protein transcription factor subunit alpha protein-coding chr5-289 chr5 134371196 134371406 + 29.3 0.000 promoter-TSS (NM_003337) promoter-TSS (NM_003337) -254 NM_001300853 51265 Hs.719926 NM_016508 ENSG00000006837 CDKL3 NKIAMRE cyclin dependent kinase like 3 protein-coding chr16-457 chr16 1964849 1965059 + 29.3 0.000 promoter-TSS (NR_003142) promoter-TSS (NR_003142) -42 NR_003142 735301 Hs.115329 NR_003142 ENSG00000255198 SNHG9 NCRNA00062 small nucleolar RNA host gene 9 ncRNA chr21-40 chr21 45427791 45428001 + 29.3 0.000 intron (NM_130445, intron 2 of 42) intron (NM_130445, intron 2 of 42) -2826 NR_027498 378832 Hs.517353 NM_199175 ENSG00000183535 COL18A1-AS1 C21orf123|NCRNA00175|PRED80 COL18A1 antisense RNA 1 ncRNA chr8-328 chr8 22397616 22397826 + 29.2 0.000 intron (NM_001351660, intron 1 of 8) intron (NM_001351660, intron 1 of 8) 4885 NM_001351659 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr19-604 chr19 1325234 1325444 + 29.2 0.000 Intergenic CpG -29620 NM_032853 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr5-346 chr5 83306601 83306811 + 29.2 0.000 intron (NM_022550, intron 7 of 7) intron (NM_022550, intron 7 of 7) -164968 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr4-156 chr4 109560071 109560281 + 29.2 0.000 promoter-TSS (NM_017918) promoter-TSS (NM_017918) -70 NM_017918 55013 Hs.234149 NM_017918 ENSG00000005059 MCUB CCDC109B mitochondrial calcium uniporter dominant negative beta subunit protein-coding chr12-555 chr12 15979756 15979966 + 29.2 0.000 intron (NM_001300779, intron 5 of 7) intron (NM_001300779, intron 5 of 7) 68529 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr15-206 chr15 101242795 101243005 + 29.2 0.000 intron (NM_014918, intron 1 of 2) intron (NM_014918, intron 1 of 2) 9148 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr8-127 chr8 140309685 140309895 + 29.2 0.000 intron (NM_001160372, intron 10 of 22) intron (NM_001160372, intron 10 of 22) 147954 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr1-676 chr1 109617366 109617576 + 29.2 0.000 Intergenic Intergenic -2342 NM_139156 271 Hs.82927 NM_004037 ENSG00000116337 AMPD2 PCH9|SPG63 adenosine monophosphate deaminase 2 protein-coding chr3-359 chr3 122533999 122534209 + 29.2 0.000 3' UTR (NM_001146106, exon 10 of 10) 3' UTR (NM_001146106, exon 10 of 10) -19165 NM_002264 3836 Hs.161008 NM_002264 ENSG00000114030 KPNA1 IPOA5|NPI-1|RCH2|SRP1 karyopherin subunit alpha 1 protein-coding chr9-364 chr9 6414254 6414464 + 29.2 0.000 intron (NM_152896, intron 1 of 15) intron (NM_152896, intron 1 of 15) 1160 NM_152896 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr22-162 chr22 50525451 50525661 + 29.2 0.000 promoter-TSS (NM_001169111) promoter-TSS (NM_001169111) 48 NM_001169111 9997 Hs.180903 NM_005138 ENSG00000130489 SCO2 CEMCOX1|ECGF1|Gliostatin|MYP6|PD-ECGF|SCO1L|TP|TYMP|TdRPase SCO cytochrome c oxidase assembly protein 2 protein-coding chr3-735 chr3 114585038 114585248 + 29.2 0.000 intron (NM_001348803, intron 6 of 13) intron (NM_001348803, intron 6 of 13) 39063 NM_001164347 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr7-454 chr7 151599951 151600161 + 29.2 0.000 intron (NM_016203, intron 5 of 15) MIRb|SINE|MIR 32202 NM_024429 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr12-257 chr12 1014191 1014401 + 29.2 0.000 intron (NR_027948, intron 1 of 19) AluSx|SINE|Alu -13452 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr1-740 chr1 44707200 44707410 + 29.2 0.000 intron (NM_001145636, intron 6 of 11) L2c|LINE|L2 14596 NR_002753 26828 NR_002753 ENSG00000199377 RNU5F-1 RNU5F|U5F RNA, U5F small nuclear 1 snRNA chr5-626 chr5 136811631 136811841 + 29.2 0.000 Intergenic Intergenic -316461 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr9-213 chr9 111661362 111661572 + 29.2 0.000 promoter-TSS (NM_001198664) promoter-TSS (NM_001198664) -138 NM_001017998 2790 Hs.534196 NM_001017998 ENSG00000242616 GNG10 - G protein subunit gamma 10 protein-coding chr10-505 chr10 110525973 110526183 + 29.2 0.000 Intergenic Intergenic 28171 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr19-316 chr19 7069231 7069441 + 29.2 0.000 promoter-TSS (NM_001044387) promoter-TSS (NM_001044387) -367 NM_001044388 79230 Hs.591380 NM_024341 ENSG00000130544 ZNF557 - zinc finger protein 557 protein-coding chr21-84 chr21 33380581 33380791 + 29.2 0.000 Intergenic Intergenic -22210 NM_001329128 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr10-476 chr10 77274114 77274324 + 29.2 0.000 intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 76542 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr12-266 chr12 56266958 56267168 + 29.2 0.000 promoter-TSS (NM_001099337) promoter-TSS (NM_001099337) 121 NM_144576 93058 Hs.4096 NM_144576 ENSG00000135469 COQ10A - coenzyme Q10A protein-coding chr21-58 chr21 44873551 44873761 + 29.2 0.000 promoter-TSS (NM_004339) promoter-TSS (NM_004339) 34 NM_004339 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF PTTG1 interacting protein protein-coding chr12-489 chr12 103986860 103987070 + 29.2 0.000 exon (NM_003211, exon 10 of 10) exon (NM_003211, exon 10 of 10) 21093 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr11-384 chr11 64317510 64317720 + 29.2 0.000 promoter-TSS (NM_001358516) promoter-TSS (NM_001358516) 469 NM_016404 51504 Hs.333579 NM_016404 ENSG00000173113 TRMT112 HSPC152|HSPC170|TRM112|TRMT11-2|hTrm112 tRNA methyltransferase subunit 11-2 protein-coding chr20-158 chr20 46557393 46557603 + 29.2 0.000 TTS (NM_022829) TTS (NM_022829) -6844 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr6-372 chr6 53496873 53497083 + 29.2 0.000 TTS (NM_001197115) TTS (NM_001197115) 48123 NM_001498 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr2-449 chr2 46164933 46165143 + 29.2 0.000 intron (NM_005400, intron 14 of 14) intron (NM_005400, intron 14 of 14) -132369 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr3-563 chr3 23776664 23776874 + 29.2 0.000 Intergenic Intergenic -29186 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr6-303 chr6 77034234 77034444 + 29.2 0.000 Intergenic LTR16C|LTR|ERVL 429683 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr1-773 chr1 206589332 206589542 + 29.2 0.000 TTS (NM_182663) TTS (NM_182663) 23028 NM_006893 1939 Hs.497581 NM_006893 ENSG00000143486 EIF2D HCA56|LGTN eukaryotic translation initiation factor 2D protein-coding chr1-469 chr1 207321458 207321668 + 29.2 0.000 promoter-TSS (NM_001300902) promoter-TSS (NM_001300902) -115 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr8-233 chr8 38030554 38030764 + 29.2 0.000 exon (NM_004095, exon 1 of 3) exon (NM_004095, exon 1 of 3) 125 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr5-404 chr5 5018299 5018509 + 29.2 0.000 Intergenic L3b|LINE|CR1 -15955 NR_026994 340094 Hs.665092 NR_026994 ENSG00000215231 LINC01020 - long intergenic non-protein coding RNA 1020 ncRNA chr10-337 chr10 104268976 104269186 + 29.2 0.000 promoter-TSS (NR_039702) promoter-TSS (NR_039702) -103 NM_183239 119391 Hs.107384 NM_183239 ENSG00000065621 GSTO2 GSTO 2-2|bA127L20.1 glutathione S-transferase omega 2 protein-coding chr15-180 chr15 48936738 48936948 + 29.2 0.000 intron (NM_203349, intron 1 of 11) intron (NM_203349, intron 1 of 11) 27076 NM_203349 399694 Hs.642615 NM_203349 ENSG00000185634 SHC4 RaLP|SHCD SHC adaptor protein 4 protein-coding chr17-427 chr17 29376762 29376972 + 29.2 0.000 Intergenic Intergenic -13795 NR_039749 100616122 NR_039749 ENSG00000284162 MIR4523 - microRNA 4523 ncRNA chr6-344 chr6 81891027 81891237 + 29.2 0.000 intron (NR_149135, intron 3 of 3) intron (NR_149135, intron 3 of 3) 42348 NR_149136 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr22-217 chr22 39532778 39532988 + 29.2 0.000 promoter-TSS (NR_130151) promoter-TSS (NR_130151) -135 NR_130151 91582 Hs.526933 NM_194326 ENSG00000187051 RPS19BP1 AROS|S19BP ribosomal protein S19 binding protein 1 protein-coding chr1-311 chr1 167936127 167936337 + 29.2 0.000 promoter-TSS (NM_001349774) promoter-TSS (NM_001349774) -7 NM_001349778 55827 Hs.435741 NM_018442 ENSG00000143164 DCAF6 1200006M05Rik|ARCAP|IQWD1|MSTP055|NRIP|PC326 DDB1 and CUL4 associated factor 6 protein-coding chr6-97 chr6 148578252 148578462 + 29.2 0.000 Intergenic Intergenic 69206 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr4-186 chr4 163540988 163541198 + 29.2 0.000 intron (NM_017923, intron 3 of 3) MIRc|SINE|MIR 46403 NM_018352 55319 Hs.267446 NM_018352 ENSG00000198498 TMA16 C4orf43 translation machinery associated 16 homolog protein-coding chr8-242 chr8 134778192 134778402 + 29.2 0.000 Intergenic Intergenic 22310 NR_029666 407030 NR_029666 ENSG00000207582 MIR30B MIRN30B|mir-30b microRNA 30b ncRNA chr20-113 chr20 3796029 3796239 + 29.2 0.000 5' UTR (NM_021872, exon 1 of 15) 5' UTR (NM_021872, exon 1 of 15) 395 NM_021873 994 Hs.153752 NM_004358 ENSG00000101224 CDC25B - cell division cycle 25B protein-coding chr4-205 chr4 10063725 10063935 + 29.2 0.000 Intergenic Intergenic 14862 NR_036090 100423011 NR_036090 ENSG00000264931 MIR3138 mir-3138 microRNA 3138 ncRNA chr7-406 chr7 6015952 6016162 + 29.2 0.000 promoter-TSS (NR_145771) promoter-TSS (NR_145771) -820 NR_145771 109616999 NR_145771 ENSG00000207217 SNORA80D - small nucleolar RNA, H/ACA box 80D snoRNA chr1-693 chr1 48470212 48470422 + 29.2 0.000 intron (NM_019073, intron 1 of 12) intron (NM_019073, intron 1 of 12) 1887 NM_001286238 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr16-285 chr16 67246215 67246425 + 29.2 0.000 intron (NM_013241, intron 1 of 21) CpG 1161 NM_013241 29109 Hs.95231 NM_013241 ENSG00000135723 FHOD1 FHOS formin homology 2 domain containing 1 protein-coding chr17-1026 chr17 48215652 48215862 + 29.1 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -59246 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr7-156 chr7 149624636 149624846 + 29.1 0.000 promoter-TSS (NR_027788) promoter-TSS (NR_027788) 49 NR_027788 79970 Hs.520785 NM_024910 ENSG00000133624 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo chr11-361 chr11 75583229 75583439 + 29.1 0.000 intron (NR_145823, intron 1 of 1) CpG 138 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr5-356 chr5 56259156 56259366 + 29.1 0.000 Intergenic LTR79|LTR|ERVL -25931 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr3-416 chr3 15007729 15007939 + 29.1 0.000 intron (NM_003298, intron 3 of 14) MIRb|SINE|MIR 57481 NM_022497 64432 Hs.657764 NM_022497 ENSG00000131368 MRPS25 MRP-S25|RPMS25 mitochondrial ribosomal protein S25 protein-coding chr5-137 chr5 177194336 177194546 + 29.1 0.000 intron (NM_172349, intron 4 of 23) AluJb|SINE|Alu 60212 NM_001365684 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr11-307 chr11 66258304 66258514 + 29.1 0.000 intron (NM_001318734, intron 1 of 15) CpG 706 NM_001134776 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr19-621 chr19 4035080 4035290 + 29.1 0.000 intron (NM_015897, intron 9 of 10) intron (NM_015897, intron 9 of 10) 27449 NM_015897 51588 Hs.105779 NM_015897 ENSG00000105229 PIAS4 PIAS-gamma|PIASY|Piasg|ZMIZ6 protein inhibitor of activated STAT 4 protein-coding chr19-579 chr19 13621591 13621801 + 29.1 0.000 Intergenic MER5A1|DNA|hAT-Charlie -110056 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr20-174 chr20 41329500 41329710 + 29.1 0.000 Intergenic Intergenic -11216 NR_126051 64900 Hs.25897 NM_022896 ENSG00000132793 LPIN3 LIPN3L|SMP2 lipin 3 protein-coding chr12-306 chr12 55829560 55829770 + 29.1 0.000 promoter-TSS (NR_036476) promoter-TSS (NR_036476) -29 NM_032364 85406 Hs.709320 NM_032364 ENSG00000135392 DNAJC14 DNAJ|DRIP78|HDJ3|LIP6 DnaJ heat shock protein family (Hsp40) member C14 protein-coding chr19-326 chr19 33373509 33373719 + 29.1 0.000 promoter-TSS (NM_001252296) promoter-TSS (NM_001252296) -95 NM_001806 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr19-347 chr19 18701018 18701228 + 29.1 0.000 intron (NM_015321, intron 1 of 13) intron (NM_015321, intron 1 of 13) 17443 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr19-855 chr19 46784774 46784984 + 29.1 0.000 promoter-TSS (NM_001145145) promoter-TSS (NM_001145145) -65 NM_001145145 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding chr12-296 chr12 68406265 68406475 + 29.1 0.000 Intergenic Intergenic 45114 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr17-625 chr17 42864619 42864829 + 29.1 0.000 Intergenic AluJr|SINE|Alu -2421 NR_002773 90586 Hs.367781 NR_002773 ENSG00000260105 AOC4P AOC4|UPAT amine oxidase copper containing 4, pseudogene pseudo chr3-334 chr3 53881939 53882149 + 29.1 0.000 exon (NM_022899, exon 1 of 13) exon (NM_022899, exon 1 of 13) 108 NM_022899 93973 Hs.412186 NM_022899 ENSG00000113812 ACTR8 ARP8|INO80N|hArp8 actin related protein 8 protein-coding chr13-191 chr13 101706647 101706857 + 29.1 0.000 intron (NM_001271754, intron 7 of 10) intron (NM_001271754, intron 7 of 10) 209893 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr22-241 chr22 19881431 19881641 + 29.1 0.000 intron (NR_147957, intron 11 of 16) intron (NR_147957, intron 11 of 16) -26662 NM_053004 54584 Hs.105642 NM_053004 ENSG00000185838 GNB1L DGCRK3|FKSG1|GY2|WDR14|WDVCF G protein subunit beta 1 like protein-coding chr1-400 chr1 228378501 228378711 + 29.1 0.000 intron (NM_001271223, intron 115 of 115) CpG-2343 18503 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr19-496 chr19 48992259 48992469 + 29.1 0.000 intron (NM_002103, intron 1 of 15) intron (NM_002103, intron 1 of 15) 945 NR_027763 2997 Hs.386225 NM_002103 ENSG00000104812 GYS1 GSY|GYS glycogen synthase 1 protein-coding chrX-80 chrX 154074128 154074338 + 29.1 0.000 intron (NM_001316337, intron 2 of 4) HAL1ME|LINE|L1 22736 NM_001369394 4204 Hs.200716 NM_004992 ENSG00000169057 MECP2 AUTSX3|MRX16|MRX79|MRXS13|MRXSL|PPMX|RS|RTS|RTT methyl-CpG binding protein 2 protein-coding chr11-362 chr11 122803444 122803654 + 29.1 0.000 intron (NM_001363365, intron 11 of 13) intron (NM_001363365, intron 11 of 13) -34951 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr12-265 chr12 53047901 53048111 + 29.1 0.000 promoter-TSS (NM_015319) promoter-TSS (NM_015319) -943 NM_015319 23371 Hs.6147 NM_015319 ENSG00000111077 TNS2 C1-TEN|C1TEN|TENC1 tensin 2 protein-coding chr11-473 chr11 65290869 65291079 + 29.1 0.000 intron (NM_002689, intron 13 of 17) intron (NM_002689, intron 13 of 17) -23892 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr12-322 chr12 48198147 48198357 + 29.1 0.000 Intergenic CpG 5040 NM_001004134 121275 Hs.446790 NM_001004134 ENSG00000172640 OR10AD1 OR10AD1P|OR12-1 olfactory receptor family 10 subfamily AD member 1 protein-coding chr12-342 chr12 7512671 7512881 + 29.1 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR -8958 NM_203416 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding chr5-552 chr5 78518595 78518805 + 29.1 0.000 intron (NM_005779, intron 3 of 4) intron (NM_005779, intron 3 of 4) 130072 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr16-276 chr16 11363317 11363527 + 29.1 0.000 Intergenic Intergenic 17963 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr19-494 chr19 44002696 44002906 + 29.1 0.000 promoter-TSS (NR_110727) promoter-TSS (NR_110727) 69 NR_110727 101928063 Hs.502127 NR_110727 ENSG00000266921 LOC101928063 - uncharacterized LOC101928063 ncRNA chr8-318 chr8 23305127 23305337 + 29.1 0.000 intron (NM_002318, intron 10 of 13) intron (NM_002318, intron 10 of 13) 17124 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr6-329 chr6 3518435 3518645 + 29.1 0.000 Intergenic Intergenic -61981 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr9-397 chr9 75028205 75028415 + 29.1 0.000 promoter-TSS (NM_152420) promoter-TSS (NM_152420) -17 NM_152420 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding chr11-433 chr11 116193384 116193594 + 29.1 0.000 Intergenic Intergenic -433289 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr20-77 chr20 58818695 58818905 + 29.1 0.000 promoter-TSS (NR_030580) promoter-TSS (NR_030580) -487 NR_030580 100126296 NR_030580 ENSG00000216031 MIR298 MIRN298|hsa-mir-298 microRNA 298 ncRNA chr8-77 chr8 144444106 144444316 + 29.1 0.000 exon (NM_013432, exon 2 of 26) exon (NM_013432, exon 2 of 26) 229 NM_013432 4796 Hs.675285 NM_013432 ENSG00000160949 TONSL IKBR|NFKBIL2 tonsoku like, DNA repair protein protein-coding chr22-143 chr22 31290808 31291018 + 29.1 0.000 intron (NM_001135911, intron 3 of 4) CpG 1575 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr12-215 chr12 6554306 6554516 + 29.1 0.000 intron (NR_036467, intron 1 of 9) intron (NR_036467, intron 1 of 9) 1631 NM_001039670 25900 Hs.15243 NM_015438 ENSG00000010295 IFFO1 HOM-TES-103|IFFO intermediate filament family orphan 1 protein-coding chr11-401 chr11 62599261 62599471 + 29.1 0.000 intron (NM_001330292, intron 3 of 17) intron (NM_001330292, intron 3 of 17) 1884 NM_001330292 9219 Hs.173043 NM_004739 ENSG00000149480 MTA2 MTA1L1|PID metastasis associated 1 family member 2 protein-coding chr12-284 chr12 110468129 110468339 + 29.1 0.000 promoter-TSS (NM_016301) promoter-TSS (NM_016301) 23 NM_016301 51184 Hs.634680 NM_016301 ENSG00000111231 GPN3 ATPBD1C GPN-loop GTPase 3 protein-coding chr5-314 chr5 132294158 132294368 + 29.1 0.000 promoter-TSS (NM_003059) promoter-TSS (NM_003059) -131 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding chr12-460 chr12 79782334 79782544 + 29.1 0.000 intron (NM_001244990, intron 22 of 24) intron (NM_001244990, intron 22 of 24) -91342 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr5-351 chr5 39194897 39195107 + 29.1 0.000 intron (NM_001243093, intron 2 of 18) intron (NM_001243093, intron 2 of 18) 24561 NM_001465 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr3-191 chr3 129596370 129596580 + 29.1 0.000 intron (NM_015103, intron 1 of 35) intron (NM_015103, intron 1 of 35) 10264 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr3-510 chr3 160449756 160449966 + 29.1 0.000 promoter-TSS (NM_173084) promoter-TSS (NM_173084) -23 NR_148401 100174949 NR_148401 ENSG00000248710 TRIM59-IFT80 IFT80-L TRIM59-IFT80 protein ncRNA chr15-110 chr15 65517647 65517857 + 29.1 0.000 promoter-TSS (NR_135486) promoter-TSS (NR_135486) -63 NM_130434 54878 Hs.458609 NM_017743 ENSG00000074603 DPP8 DP8|DPRP-1|DPRP1|MST097|MSTP097|MSTP135|MSTP141 dipeptidyl peptidase 8 protein-coding chr10-601 chr10 33453160 33453370 + 29.1 0.000 Intergenic Intergenic -118360 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr9-220 chr9 136901453 136901663 + 29.1 0.000 intron (NM_021138, intron 4 of 10) L1MB3|LINE|L1 14825 NR_039697 100616480 NR_039697 ENSG00000266507 MIR4479 - microRNA 4479 ncRNA chr11-458 chr11 134252911 134253121 + 29.1 0.000 promoter-TSS (NM_014384) promoter-TSS (NM_014384) 336 NM_001037304 29087 Hs.13645 NM_014174 ENSG00000151500 THYN1 HSPC144|MDS012|MY105|THY28|THY28KD thymocyte nuclear protein 1 protein-coding chr11-658 chr11 3823375 3823585 + 29.1 0.000 intron (NR_027017, intron 4 of 7) intron (NR_027017, intron 4 of 7) 14920 NR_144428 27315 Hs.133968 NM_014489 ENSG00000148985 PGAP2 CWH43-N|FRAG1|HPMRS3|MRT17|MRT21 post-GPI attachment to proteins 2 protein-coding chr1-482 chr1 62690344 62690554 + 29.1 0.000 Intergenic Intergenic -2063 NM_001272002 85440 Hs.744927 NM_033407 ENSG00000116641 DOCK7 EIEE23|ZIR2 dedicator of cytokinesis 7 protein-coding chr9-457 chr9 100429380 100429590 + 29.1 0.000 promoter-TSS (NM_001198806) promoter-TSS (NM_001198806) -29 NM_001198806 91283 Hs.530272 NM_080655 ENSG00000066697 MSANTD3 C9orf30|L8 Myb/SANT DNA binding domain containing 3 protein-coding chr2-1050 chr2 152586168 152586378 + 29.1 0.000 intron (NM_052905, intron 9 of 25) intron (NM_052905, intron 9 of 25) 131188 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr10-206 chr10 67884433 67884643 + 29.1 0.000 promoter-TSS (NM_012238) promoter-TSS (NM_012238) -118 NM_012238 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr6-275 chr6 143450503 143450713 + 29.1 0.000 promoter-TSS (NM_182503) promoter-TSS (NM_182503) 87 NM_182503 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase tRNA specific 2 protein-coding chr7-74 chr7 76998828 76999038 + 29.1 0.000 intron (NR_023383, intron 2 of 10) (GT)n|Simple_repeat|Simple_repeat 18111 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr1-1028 chr1 244833848 244834058 + 29.1 0.000 Intergenic Intergenic -1353 NM_001312871 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr20-120 chr20 50483638 50483848 + 29.1 0.000 Intergenic Intergenic -26578 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr22-380 chr22 42473579 42473789 + 29.1 0.000 Intergenic MER65-int|LTR|ERV1 -26895 NR_027786 94009 Hs.360940 NM_170694 ENSG00000172250 SERHL BK126B4.1|BK126B4.2|HS126B42|dJ222E13.1 serine hydrolase like (pseudogene) pseudo chr17-181 chr17 42659263 42659473 + 29.1 0.000 promoter-TSS (NM_016437) promoter-TSS (NM_016437) 84 NM_016437 27175 Hs.279669 NM_016437 ENSG00000037042 TUBG2 - tubulin gamma 2 protein-coding chr13-78 chr13 48976256 48976466 + 29.1 0.000 promoter-TSS (NM_001278438) promoter-TSS (NM_001278438) -248 NM_001278438 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr1-474 chr1 45339707 45339917 + 29.0 0.000 promoter-TSS (NM_025077) promoter-TSS (NM_025077) 145 NM_001293195 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr8-141 chr8 47941977 47942187 + 29.0 0.000 intron (NM_001081640, intron 10 of 84) intron (NM_001081640, intron 10 of 84) 18054 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr2-257 chr2 27134626 27134836 + 29.0 0.000 promoter-TSS (NR_138479) promoter-TSS (NR_138479) -56 NR_138479 10113 Hs.279784 NM_013388 ENSG00000138073 PREB SEC12 prolactin regulatory element binding protein-coding chr6-110 chr6 33580197 33580407 + 29.0 0.000 promoter-TSS (NM_001188) promoter-TSS (NM_001188) -26 NM_001188 578 Hs.485139 NM_001188 ENSG00000030110 BAK1 BAK|BAK-LIKE|BCL2L7|CDN1 BCL2 antagonist/killer 1 protein-coding chr7-324 chr7 107891153 107891363 + 29.0 0.000 promoter-TSS (NM_000108) promoter-TSS (NM_000108) 75 NM_000108 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr15-344 chr15 76730274 76730484 + 29.0 0.000 intron (NR_148227, intron 16 of 32) intron (NR_148227, intron 16 of 32) 131565 NM_001145923 49855 Hs.458986 NM_020843 ENSG00000140386 SCAPER IDDRP|MSTP063|ZNF291|Zfp291 S-phase cyclin A associated protein in the ER protein-coding chr17-289 chr17 77433628 77433838 + 29.0 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) -17016 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr7-537 chr7 78970681 78970891 + 29.0 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -38202 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr11-556 chr11 11916936 11917146 + 29.0 0.000 intron (NM_001282659, intron 8 of 27) AluJo|SINE|Alu 75618 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr17-693 chr17 67800463 67800673 + 29.0 0.000 Intergenic Intergenic -24935 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr7-225 chr7 2104308 2104518 + 29.0 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -15361 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr5-325 chr5 168366094 168366304 + 29.0 0.000 intron (NM_001161661, intron 1 of 22) (GTGT)n|Simple_repeat|Simple_repeat 74554 NM_001161661 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr4-335 chr4 128524411 128524621 + 29.0 0.000 Intergenic Intergenic 96500 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr5-527 chr5 10856986 10857196 + 29.0 0.000 Intergenic Intergenic -95857 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr12-510 chr12 78802746 78802956 + 29.0 0.000 Intergenic Intergenic -61131 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr1-1108 chr1 206106551 206106761 + 29.0 0.000 TTS (NM_000707) TTS (NM_000707) 10732 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr4-296 chr4 152485819 152486029 + 29.0 0.000 intron (NM_001349798, intron 2 of 13) Tigger3b|DNA|TcMar-Tigger 3492 NR_036092 100422896 NR_036092 ENSG00000264678 MIR3140 mir-3140 microRNA 3140 ncRNA chr8-197 chr8 96262753 96262963 + 29.0 0.000 intron (NM_014754, intron 1 of 12) intron (NM_014754, intron 1 of 12) 956 NM_001290225 9791 Hs.292579 NM_014754 ENSG00000156471 PTDSS1 LMHD|PSS1|PSSA phosphatidylserine synthase 1 protein-coding chr7-172 chr7 90211583 90211793 + 29.0 0.000 promoter-TSS (NM_001244946) promoter-TSS (NM_001244946) -52 NM_001040665 261729 Hs.489051 NM_152999 ENSG00000157214 STEAP2 IPCA1|PCANAP1|PUMPCn|STAMP1|STMP STEAP2 metalloreductase protein-coding chr17-624 chr17 42379362 42379572 + 29.0 0.000 intron (NM_213662, intron 1 of 23) intron (NM_213662, intron 1 of 23) 8975 NM_001369518 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr16-492 chr16 84789008 84789218 + 29.0 0.000 Intergenic Intergenic -30872 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr9-154 chr9 128191380 128191590 + 29.0 0.000 promoter-TSS (NM_001131018) promoter-TSS (NM_001131018) 87 NM_001257976 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr17-597 chr17 40038935 40039145 + 29.0 0.000 intron (NR_052017, intron 3 of 24) intron (NR_052017, intron 3 of 24) -11395 NR_102369 101340251 NR_102369 ENSG00000238793 SNORD124 - small nucleolar RNA, C/D box 124 snoRNA chr6-111 chr6 73521215 73521425 + 29.0 0.000 promoter-TSS (NM_001402) promoter-TSS (NM_001402) -288 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr20-75 chr20 35954489 35954699 + 29.0 0.000 promoter-TSS (NM_033630) promoter-TSS (NM_033630) 32 NM_033630 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding chr14-485 chr14 68137766 68137976 + 29.0 0.000 intron (NM_133509, intron 7 of 10) Eulor6D|DNA?|DNA? 314279 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr4-145 chr4 721494 721704 + 29.0 0.000 intron (NM_001317836, intron 1 of 11) intron (NM_001317836, intron 1 of 11) 15767 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr3-70 chr3 196694905 196695115 + 29.0 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 17240 NM_032898 84984 Hs.282800 NM_032898 ENSG00000174007 CEP19 C3orf34|MOSPGF centrosomal protein 19 protein-coding chr5-365 chr5 140303127 140303337 + 29.0 0.000 promoter-TSS (NM_002622) promoter-TSS (NM_002622) -131 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr1-793 chr1 155135154 155135364 + 29.0 0.000 promoter-TSS (NM_001122837) promoter-TSS (NM_001122837) -116 NM_001287592 55974 Hs.292154 NM_018845 ENSG00000169241 SLC50A1 HsSWEET1|RAG1AP1|SCP|SWEET1|slv solute carrier family 50 member 1 protein-coding chr10-380 chr10 100890723 100890933 + 29.0 0.000 Intergenic Intergenic -22135 NM_001136123 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr2-297 chr2 65359523 65359733 + 29.0 0.000 intron (NM_181784, intron 1 of 5) intron (NM_181784, intron 1 of 5) 7150 NM_001128210 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr5-452 chr5 80247230 80247440 + 29.0 0.000 intron (NR_126061, intron 1 of 13) intron (NR_126061, intron 1 of 13) 8713 NM_178276 256987 Hs.288232 NM_178276 ENSG00000164300 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding chr3-213 chr3 15099006 15099216 + 29.0 0.000 promoter-TSS (NR_126155) promoter-TSS (NR_126155) 37 NM_001302378 64145 Hs.475565 NM_022340 ENSG00000131381 RBSN Rabenosyn-5|ZFYVE20 rabenosyn, RAB effector protein-coding chr19-459 chr19 7920882 7921092 + 29.0 0.000 promoter-TSS (NR_030717) promoter-TSS (NR_030717) 5 NR_030717 6618 Hs.631860 NM_003083 ENSG00000104976 SNAPC2 PTFDELTA|SNAP45 small nuclear RNA activating complex polypeptide 2 protein-coding chr20-83 chr20 62900354 62900564 + 29.0 0.000 intron (NM_001193370, intron 6 of 14) intron (NM_001193370, intron 6 of 14) -17556 NR_145839 109623463 NR_145839 SNORA117 - small nucleolar RNA, H/ACA box 117 snoRNA chr7-240 chr7 2232982 2233192 + 29.0 0.000 promoter-TSS (NM_001013836) promoter-TSS (NM_001013836) -142 NM_001304524 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr11-394 chr11 67374233 67374443 + 29.0 0.000 promoter-TSS (NM_013246) promoter-TSS (NM_013246) -161 NM_001166212 23529 Hs.502977 NM_013246 ENSG00000175505 CLCF1 BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6 cardiotrophin like cytokine factor 1 protein-coding chr1-890 chr1 64917471 64917681 + 29.0 0.000 intron (NM_001321852, intron 1 of 24) intron (NM_001321852, intron 1 of 24) 48973 NM_002227 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr1-1040 chr1 31306347 31306557 + 29.0 0.000 intron (NM_001282566, intron 1 of 6) MER44C|DNA|TcMar-Tigger 9470 NM_001282574 51538 Hs.524094 NM_016505 ENSG00000121766 ZCCHC17 HSPC251|PS1D|pNO40 zinc finger CCHC-type containing 17 protein-coding chr18-59 chr18 12420249 12420459 + 29.0 0.000 exon (NM_006553, exon 2 of 7) exon (NM_006553, exon 2 of 7) 165 NM_001142406 10650 Hs.514718 NM_006553 ENSG00000141391 PRELID3A C18orf43|HFL-EDDG1|SLMO1 PRELI domain containing 3A protein-coding chr15-187 chr15 78049931 78050141 + 29.0 0.000 intron (NM_144572, intron 2 of 12) intron (NM_144572, intron 2 of 12) 27616 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr15-148 chr15 60127775 60127985 + 29.0 0.000 Intergenic MIRc|SINE|MIR 123569 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr1-561 chr1 11147535 11147745 + 29.0 0.000 intron (NM_004958, intron 31 of 57) intron (NM_004958, intron 31 of 57) 3742 NR_046600 100873935 Hs.679133 NR_046600 ENSG00000225602 MTOR-AS1 - MTOR antisense RNA 1 ncRNA chr3-714 chr3 191376881 191377091 + 29.0 0.000 intron (NM_178335, intron 6 of 11) intron (NM_178335, intron 6 of 11) -46450 NM_198152 257313 Hs.518492 NM_198152 ENSG00000188958 UTS2B U2B|URP|UTS2D urotensin 2B protein-coding chr16-184 chr16 30650774 30650984 + 28.9 0.000 promoter-TSS (NM_024031) promoter-TSS (NM_024031) -81 NM_024031 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 - proline rich 14 protein-coding chr15-164 chr15 100889375 100889585 + 28.9 0.000 intron (NM_001293815, intron 3 of 9) intron (NM_001293815, intron 3 of 9) 9649 NM_000693 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr4-387 chr4 76831083 76831293 + 28.9 0.000 Intergenic Intergenic 66956 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr2-541 chr2 42924799 42925009 + 28.9 0.000 Intergenic Intergenic 114639 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr12-415 chr12 51308336 51308546 + 28.9 0.000 intron (NM_001364779, intron 2 of 12) intron (NM_001364779, intron 2 of 12) 15733 NM_016293 51411 Hs.14770 NM_016293 ENSG00000110934 BIN2 BRAP-1 bridging integrator 2 protein-coding chr3-379 chr3 130037210 130037420 + 28.9 0.000 Intergenic AluSx3|SINE|Alu -44516 NM_001136152 644974 Hs.722197 NM_001136152 ENSG00000251287 ALG1L2 - ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2 protein-coding chr7-535 chr7 65322269 65322479 + 28.9 0.000 Intergenic MER5B|DNA|hAT-Charlie -51425 NM_001287532 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr1-1142 chr1 228861331 228861541 + 28.9 0.000 Intergenic Intergenic 125957 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr9-724 chr9 97525453 97525663 + 28.9 0.000 intron (NM_001166116, intron 2 of 9) ERVL-B4-int|LTR|ERVL 23892 NM_003275 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr20-234 chr20 50744574 50744784 + 28.9 0.000 intron (NM_032521, intron 2 of 2) L2c|LINE|L2 13099 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr17-297 chr17 41930380 41930590 + 28.9 0.000 promoter-TSS (NR_110662) promoter-TSS (NR_110662) -132 NR_110662 83538 Hs.201134 NM_031421 ENSG00000204815 TTC25 - tetratricopeptide repeat domain 25 protein-coding chr2-355 chr2 10584941 10585151 + 28.9 0.000 intron (NR_048552, intron 18 of 19) intron (NR_048552, intron 18 of 19) 104929 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr7-440 chr7 55534280 55534490 + 28.9 0.000 intron (NM_030796, intron 1 of 4) intron (NM_030796, intron 1 of 4) 3309 NM_001321242 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr12-217 chr12 45215986 45216196 + 28.9 0.000 promoter-TSS (NM_001204803) promoter-TSS (NM_001204803) -4 NM_001025356 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr9-477 chr9 110351091 110351301 + 28.9 0.000 Intergenic Intergenic -13312 NM_001286947 255220 Hs.147064 NM_001003936 ENSG00000204193 TXNDC8 SPTRX-3|SPTRX3|TRX6|bA427L11.2 thioredoxin domain containing 8 protein-coding chr2-1055 chr2 175837113 175837323 + 28.9 0.000 Intergenic Intergenic 165049 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr15-169 chr15 75738601 75738811 + 28.9 0.000 intron (NR_024595, intron 2 of 4) CpG-8450 1371 NR_024595 100128285 Hs.604066 NR_024595 DNM1P35 DNM1DN8-2|DNM1DN8.2|DNM1DN8@|FKSG88 dynamin 1 pseudogene 35 pseudo chr10-361 chr10 110207540 110207750 + 28.9 0.000 promoter-TSS (NM_130439) promoter-TSS (NM_130439) 40 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr4-251 chr4 71545253 71545463 + 28.9 0.000 intron (NM_003759, intron 15 of 22) intron (NM_003759, intron 15 of 22) 206305 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr8-234 chr8 69120810 69121020 + 28.9 0.000 Intergenic L1MDa|LINE|L1 -16725 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr4-513 chr4 119663316 119663526 + 28.9 0.000 Intergenic Intergenic -34617 NM_001083 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr3-381 chr3 156555120 156555330 + 28.9 0.000 promoter-TSS (NM_001308204) promoter-TSS (NM_001308204) -25 NM_007107 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr19-380 chr19 49363573 49363783 + 28.9 0.000 promoter-TSS (NM_001197302) promoter-TSS (NM_001197302) -199 NM_014419 27120 Hs.515855 NM_014419 ENSG00000104901 DKKL1 CT34|SGY|SGY-1|SGY1 dickkopf like acrosomal protein 1 protein-coding chr1-954 chr1 43763550 43763760 + 28.9 0.000 intron (NM_001270465, intron 2 of 7) intron (NM_001270465, intron 2 of 7) -36312 NR_125986 101929592 NR_125986 ENSG00000229444 LOC101929592 - uncharacterized LOC101929592 ncRNA chr17-279 chr17 29148822 29149032 + 28.9 0.000 intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) -8538 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr20-108 chr20 17569172 17569382 + 28.9 0.000 promoter-TSS (NM_001278608) promoter-TSS (NM_001278608) -57 NM_001278608 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr8-209 chr8 133816738 133816948 + 28.9 0.000 Intergenic Intergenic -39491 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr10-100 chr10 15168844 15169054 + 28.9 0.000 promoter-TSS (NM_004808) promoter-TSS (NM_004808) -256 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr2-500 chr2 127508634 127508844 + 28.9 0.000 intron (NM_017969, intron 2 of 13) intron (NM_017969, intron 2 of 13) 17750 NM_017969 55677 Hs.469879 NM_017969 ENSG00000163166 IWS1 - interacts with SUPT6H, CTD assembly factor 1 protein-coding chr17-477 chr17 4176552 4176762 + 28.9 0.000 intron (NR_047571, intron 18 of 23) MIRb|SINE|MIR 32960 NM_001254755 124936 Hs.513871 NM_144611 ENSG00000167740 CYB5D2 - cytochrome b5 domain containing 2 protein-coding chr14-190 chr14 75002637 75002847 + 28.9 0.000 promoter-TSS (NM_014239) promoter-TSS (NM_014239) -179 NM_014239 8892 Hs.409137 NM_014239 ENSG00000119718 EIF2B2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B subunit beta protein-coding chr17-406 chr17 64679859 64680069 + 28.9 0.000 Intergenic Intergenic -17657 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr8-280 chr8 134039343 134039553 + 28.9 0.000 Intergenic L1PREC2|LINE|L1 152952 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr1-1096 chr1 115545922 115546132 + 28.9 0.000 Intergenic Intergenic -95943 NM_001172411 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr5-195 chr5 134226127 134226337 + 28.9 0.000 promoter-TSS (NR_149151) promoter-TSS (NR_149151) -159 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr13-162 chr13 93227301 93227511 + 28.9 0.000 5' UTR (NM_005708, exon 1 of 9) 5' UTR (NM_005708, exon 1 of 9) 599 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr15-227 chr15 75891967 75892177 + 28.9 0.000 intron (NM_001284382, intron 10 of 11) intron (NM_001284382, intron 10 of 11) -11787 NM_012170 26263 Hs.591115 NM_012170 ENSG00000167196 FBXO22 FBX22|FISTC1 F-box protein 22 protein-coding chr1-499 chr1 167553694 167553904 + 28.9 0.000 promoter-TSS (NM_003851) promoter-TSS (NM_003851) -37 NM_003851 8804 Hs.5710 NM_003851 ENSG00000143162 CREG1 CREG cellular repressor of E1A stimulated genes 1 protein-coding chr18-62 chr18 48446648 48446858 + 28.9 0.000 Intergenic Intergenic -34168 NM_001371287 chr11-431 chr11 76770893 76771103 + 28.9 0.000 Intergenic Intergenic -11315 NM_001258210 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr3-410 chr3 180447221 180447431 + 28.9 0.000 Intergenic Intergenic 33153 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr9-752 chr9 75148572 75148782 + 28.9 0.000 Intergenic Intergenic 60163 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr19-576 chr19 3080409 3080619 + 28.9 0.000 Intergenic Intergenic -13848 NM_002067 2767 Hs.650575 NM_002067 ENSG00000088256 GNA11 FBH|FBH2|FHH2|GNA-11|HHC2|HYPOC2 G protein subunit alpha 11 protein-coding chr18-108 chr18 41940495 41940705 + 28.9 0.000 Intergenic Intergenic -14634 NM_001308020 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr13-156 chr13 79750260 79750470 + 28.9 0.000 Intergenic Intergenic -54021 NR_125785 102724076 Hs.208617 NR_125785 ENSG00000229011 LINC01038 - long intergenic non-protein coding RNA 1038 ncRNA chr7-335 chr7 66588428 66588638 + 28.9 0.000 non-coding (NR_111973, exon 2 of 11) non-coding (NR_111973, exon 2 of 11) 3874 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr6-173 chr6 71294308 71294518 + 28.9 0.000 intron (NM_001324266, intron 3 of 6) intron (NM_001324266, intron 3 of 6) 5602 NM_001324266 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr10-325 chr10 30736924 30737134 + 28.9 0.000 Intergenic L1P3|LINE|L1 13810 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr21-79 chr21 34888670 34888880 + 28.9 0.000 promoter-TSS (NM_001122607) promoter-TSS (NM_001122607) -76 NM_001122607 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr2-252 chr2 61536673 61536883 + 28.9 0.000 intron (NM_003400, intron 1 of 24) intron (NM_003400, intron 1 of 24) 1578 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr5-409 chr5 55159897 55160107 + 28.9 0.000 promoter-TSS (NR_131337) promoter-TSS (NR_131337) -169 NM_001008397 493869 Hs.289044 NM_001008397 ENSG00000164294 GPX8 EPLA847|GPx-8|GSHPx-8|UNQ847 glutathione peroxidase 8 (putative) protein-coding chr1-699 chr1 178651103 178651313 + 28.9 0.000 Intergenic Intergenic -26541 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chr9-203 chr9 134434919 134435129 + 28.9 0.000 intron (NM_002957, intron 9 of 9) intron (NM_002957, intron 9 of 9) 28464 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr1-742 chr1 46203055 46203265 + 28.9 0.000 promoter-TSS (NM_001013615) promoter-TSS (NM_001013615) -174 NM_001013615 541468 Hs.568642 NM_001013615 ENSG00000171357 LURAP1 C1orf190|LRAP35a|LRP35A leucine rich adaptor protein 1 protein-coding chr8-164 chr8 23336030 23336240 + 28.9 0.000 promoter-TSS (NR_038323) promoter-TSS (NR_038323) -73 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr12-383 chr12 6451838 6452048 + 28.9 0.000 promoter-TSS (NR_015382) promoter-TSS (NR_015382) -99 NR_147128 55080 Hs.504597 NM_018009 ENSG00000139192 TAPBPL TAPBP-R|TAPBPR TAP binding protein like protein-coding chr6-265 chr6 163745961 163746171 + 28.8 0.000 Intergenic Intergenic -74582 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr2-681 chr2 42315119 42315329 + 28.8 0.000 intron (NM_001145076, intron 16 of 21) intron (NM_001145076, intron 16 of 21) 44814 NR_134948 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr18-105 chr18 7812508 7812718 + 28.8 0.000 intron (NM_002845, intron 2 of 30) intron (NM_002845, intron 2 of 30) 245297 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr10-284 chr10 6050927 6051137 + 28.8 0.000 intron (NM_000417, intron 1 of 7) intron (NM_000417, intron 1 of 7) 11335 NM_001308243 3559 Hs.231367 NM_000417 ENSG00000134460 IL2RA CD25|IDDM10|IL2R|IMD41|TCGFR|p55 interleukin 2 receptor subunit alpha protein-coding chr3-180 chr3 49339980 49340190 + 28.8 0.000 promoter-TSS (NM_001251877) promoter-TSS (NM_001251877) -32 NM_001251877 7375 Hs.77500 NM_003363 ENSG00000114316 USP4 UNP|Unph ubiquitin specific peptidase 4 protein-coding chr9-134 chr9 4984760 4984970 + 28.8 0.000 promoter-TSS (NM_001322196) promoter-TSS (NM_001322196) -221 NM_001322195 3717 Hs.656213 NM_004972 ENSG00000096968 JAK2 JTK10|THCYT3 Janus kinase 2 protein-coding chr6-130 chr6 79233711 79233921 + 28.8 0.000 non-coding (NR_040671, exon 1 of 2) non-coding (NR_040671, exon 1 of 2) 142 NR_040671 100288198 Hs.586270 NR_040671 ENSG00000270362 HMGN3-AS1 - HMGN3 antisense RNA 1 ncRNA chr22-81 chr22 19432355 19432565 + 28.8 0.000 promoter-TSS (NM_003325) promoter-TSS (NM_003325) -85 NM_001318151 64976 Hs.431307 NM_003776 ENSG00000185608 MRPL40 L40mt|MRP-L22|MRP-L40|MRPL22|NLVCF|URIM mitochondrial ribosomal protein L40 protein-coding chr22-280 chr22 31244179 31244389 + 28.8 0.000 intron (NM_005569, intron 2 of 15) intron (NM_005569, intron 2 of 15) -4100 NM_016733 3985 Hs.474596 NM_005569 ENSG00000182541 LIMK2 - LIM domain kinase 2 protein-coding chr16-311 chr16 28492143 28492353 + 28.8 0.000 promoter-TSS (NM_001286105) promoter-TSS (NM_001286105) 54 NM_001042432 1201 Hs.534667 NM_000086 ENSG00000188603 CLN3 BTN1|BTS|JNCL CLN3 lysosomal/endosomal transmembrane protein, battenin protein-coding chr11-661 chr11 10899864 10900074 + 28.8 0.000 Intergenic Intergenic 41752 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr2-798 chr2 232988463 232988673 + 28.8 0.000 intron (NM_019850, intron 1 of 14) L1ME4b|LINE|L1 -24046 NR_136325 101928881 Hs.570311 NR_136325 ENSG00000222001 LOC101928881 - uncharacterized LOC101928881 ncRNA chr3-228 chr3 184363189 184363399 + 28.8 0.000 promoter-TSS (NM_001278698) promoter-TSS (NM_001278698) -67 NM_001278698 5437 Hs.432574 NM_006232 ENSG00000163882 POLR2H RPABC3|RPB17|RPB8 RNA polymerase II subunit H protein-coding chr9-396 chr9 5833057 5833267 + 28.8 0.000 promoter-TSS (NM_024896) promoter-TSS (NM_024896) -45 NM_024896 79956 Hs.591078 NM_024896 ENSG00000099219 ERMP1 FXNA|KIAA1815|bA207C16.3 endoplasmic reticulum metallopeptidase 1 protein-coding chr22-299 chr22 45246334 45246544 + 28.8 0.000 Intergenic Intergenic -5670 NM_001009880 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr16-468 chr16 84618840 84619050 + 28.8 0.000 promoter-TSS (NM_021149) promoter-TSS (NM_021149) -867 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr1-862 chr1 113457009 113457219 + 28.8 0.000 intron (NM_001142782, intron 1 of 20) intron (NM_001142782, intron 1 of 20) 66599 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr1-470 chr1 212608342 212608552 + 28.8 0.000 promoter-TSS (NM_001040619) promoter-TSS (NM_001040619) -314 NM_001206484 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chr1-529 chr1 156213014 156213224 + 28.8 0.000 TTS (NM_001286184) TTS (NM_001286184) 131 NM_007221 11243 Hs.530479 NM_007221 ENSG00000160783 PMF1 - polyamine modulated factor 1 protein-coding chr6-202 chr6 43629950 43630160 + 28.8 0.000 promoter-TSS (NM_019096) promoter-TSS (NM_019096) 513 NM_001003690 9587 Hs.122346 NM_014628 ENSG00000124688 MAD2L1BP CMT2 MAD2L1 binding protein protein-coding chr7-350 chr7 66952740 66952950 + 28.8 0.000 intron (NM_017994, intron 5 of 6) intron (NM_017994, intron 5 of 6) 31620 NM_017994 55069 Hs.488478 NM_017994 ENSG00000106609 TMEM248 C7orf42 transmembrane protein 248 protein-coding chr9-668 chr9 77899937 77900147 + 28.8 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 131769 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr13-84 chr13 98938119 98938329 + 28.8 0.000 intron (NM_001366682, intron 2 of 53) intron (NM_001366682, intron 2 of 53) 39840 NM_001366679 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr19-665 chr19 41176274 41176484 + 28.8 0.000 Intergenic Intergenic -16840 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr3-284 chr3 51340446 51340656 + 28.8 0.000 intron (NM_004947, intron 37 of 52) intron (NM_004947, intron 37 of 52) -44740 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr12-203 chr12 6663229 6663439 + 28.8 0.000 promoter-TSS (NM_001127583) promoter-TSS (NM_001127583) -215 NM_016162 51147 Hs.524210 NM_016162 ENSG00000111653 ING4 my036|p29ING4 inhibitor of growth family member 4 protein-coding chr3-624 chr3 189914855 189915065 + 28.8 0.000 Intergenic Intergenic 85038 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr10-533 chr10 77505931 77506141 + 28.8 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 131772 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr20-207 chr20 62623854 62624064 + 28.8 0.000 Intergenic Intergenic -18544 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chr2-655 chr2 44100522 44100732 + 28.8 0.000 Intergenic Intergenic -68176 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr7-687 chr7 148772638 148772848 + 28.8 0.000 intron (NM_001370660, intron 9 of 21) MER117|DNA|hAT-Charlie 73033 NM_001370664 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr13-99 chr13 110012161 110012371 + 28.8 0.000 Intergenic Intergenic -41019 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr19-504 chr19 17560278 17560488 + 28.8 0.000 exon (NM_024656, exon 3 of 12) exon (NM_024656, exon 3 of 12) 4734 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr9-465 chr9 136760857 136761067 + 28.8 0.000 intron (NM_203347, intron 6 of 6) MLT1C|LTR|ERVL-MaLR -2419 NM_001345934 138307 Hs.323991 NM_178469 ENSG00000204001 LCN8 EP17|LCN5 lipocalin 8 protein-coding chr10-524 chr10 3852391 3852601 + 28.8 0.000 Intergenic Intergenic 18546 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr1-618 chr1 109283275 109283485 + 28.8 0.000 promoter-TSS (NM_001350242) promoter-TSS (NM_001350242) -212 NM_001350238 84722 Hs.405925 NM_032636 ENSG00000134222 PSRC1 DDA3|FP3214 proline and serine rich coiled-coil 1 protein-coding chr7-399 chr7 38318834 38319044 + 28.8 0.000 Intergenic L2c|LINE|L2 -22638 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr5-392 chr5 177232849 177233059 + 28.8 0.000 intron (NM_172349, intron 6 of 23) Tigger4|DNA|TcMar-Tigger 70765 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr19-580 chr19 14283977 14284187 + 28.8 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -49661 NR_134916 101928845 Hs.531617 NR_134916 ENSG00000267147 LINC01842 - long intergenic non-protein coding RNA 1842 ncRNA chr14-256 chr14 95483290 95483500 + 28.8 0.000 Intergenic Intergenic -7560 NM_001363692 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|KASH3|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chr11-471 chr11 58578164 58578374 + 28.8 0.000 promoter-TSS (NR_024091) promoter-TSS (NR_024091) -30 NM_001143995 9404 Hs.125474 NM_004811 ENSG00000110031 LPXN LDPL leupaxin protein-coding chr12-100 chr12 93442148 93442358 + 28.8 0.000 promoter-TSS (NM_003348) promoter-TSS (NM_003348) -306 NM_003348 7334 Hs.524630 NM_003348 ENSG00000177889 UBE2N HEL-S-71|UBC13|UBCHBEN; UBC13|UbcH-ben|UbcH13 ubiquitin conjugating enzyme E2 N protein-coding chr2-539 chr2 20446961 20447171 + 28.8 0.000 promoter-TSS (NM_004040) promoter-TSS (NM_004040) -8 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr13-149 chr13 50209024 50209234 + 28.8 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 37111 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr17-440 chr17 57874570 57874780 + 28.8 0.000 intron (NM_001271875, intron 3 of 10) intron (NM_001271875, intron 3 of 10) -24631 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr9-258 chr9 134171882 134172092 + 28.8 0.000 Intergenic Intergenic -7423 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr1-441 chr1 1511816 1512026 + 28.8 0.000 promoter-TSS (NM_018188) promoter-TSS (NM_018188) -241 NM_001170535 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr6-228 chr6 157954301 157954511 + 28.8 0.000 Intergenic Intergenic -27457 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr3-164 chr3 48989696 48989906 + 28.8 0.000 promoter-TSS (NM_177938) promoter-TSS (NM_177938) -107 NM_177938 54681 Hs.654944 NM_017732 ENSG00000178467 P4HTM EGLN4|HIFPH4|P4H-TM|PH-4|PH4|PHD4 prolyl 4-hydroxylase, transmembrane protein-coding chr9-582 chr9 134671658 134671868 + 28.8 0.000 intron (NM_001278074, intron 1 of 65) intron (NM_001278074, intron 1 of 65) -18920 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr7-547 chr7 130891587 130891797 + 28.8 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) -14153 NR_029517 407024 NR_029517 ENSG00000283797 MIR29B1 MIRN29B1|miR-29b|miRNA29B1|mir-29b-1 microRNA 29b-1 ncRNA chr3-277 chr3 196942291 196942501 + 28.8 0.000 promoter-TSS (NM_001355243) promoter-TSS (NM_001355243) 44 NM_001308036 22916 Hs.591671 NM_007362 ENSG00000114503 NCBP2 CBC2|CBP20|NIP1|PIG55 nuclear cap binding protein subunit 2 protein-coding chr16-210 chr16 84228374 84228584 + 28.6 0.000 intron (NM_172347, intron 2 of 2) intron (NM_172347, intron 2 of 2) 11271 NM_172347 93107 Hs.335877 NM_133490 ENSG00000168418 KCNG4 KV6.3|KV6.4 potassium voltage-gated channel modifier subfamily G member 4 protein-coding chr11-386 chr11 65117709 65117919 + 28.6 0.000 promoter-TSS (NM_014205) promoter-TSS (NM_014205) -113 NM_014205 741 Hs.121025 NM_014205 ENSG00000174276 ZNHIT2 C11orf5|FON zinc finger HIT-type containing 2 protein-coding chr1-487 chr1 212857932 212858142 + 28.6 0.000 promoter-TSS (NM_014053) promoter-TSS (NM_014053) 101 NR_027286 642946 Hs.552649 NR_027285 ENSG00000198468 FLVCR1-DT FLVCR1-AS1|LQK1|NCRNA00292 FLVCR1 divergent transcript ncRNA chr10-295 chr10 71772292 71772502 + 28.6 0.000 intron (NM_022153, intron 1 of 6) intron (NM_022153, intron 1 of 6) 1123 NM_022153 64115 Hs.47382 NM_022153 ENSG00000107738 VSIR B7-H5|B7H5|C10orf54|DD1alpha|Dies1|GI24|PD-1H|PP2135|SISP1|VISTA V-set immunoregulatory receptor protein-coding chr7-291 chr7 5570101 5570311 + 28.6 0.000 Intergenic CpG -22610 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr19-842 chr19 40831949 40832159 + 28.6 0.000 Intergenic Intergenic 18393 NM_000762 1548 Hs.250615 NM_000762 ENSG00000255974 CYP2A6 CPA6|CYP2A|CYP2A3|CYPIIA6|P450C2A|P450PB cytochrome P450 family 2 subfamily A member 6 protein-coding chr12-189 chr12 132084114 132084324 + 28.6 0.000 promoter-TSS (NR_003290) promoter-TSS (NR_003290) -64 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400P1 EP400NL EP400 pseudogene 1 pseudo chr20-197 chr20 9051677 9051887 + 28.6 0.000 Intergenic Intergenic -17272 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr10-392 chr10 31961723 31961933 + 28.6 0.000 Intergenic MER50-int|LTR|ERV1 -32952 NM_001270695 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr8-173 chr8 140645924 140646134 + 28.6 0.000 Intergenic Charlie2a|DNA|hAT-Charlie -10396 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr17-500 chr17 78315760 78315970 + 28.6 0.000 Intergenic Intergenic -37373 NR_073178 100996291 Hs.744493 NR_073178 ENSG00000204277 LINC01993 - long intergenic non-protein coding RNA 1993 ncRNA chr11-383 chr11 123741498 123741708 + 28.6 0.000 promoter-TSS (NM_003455) promoter-TSS (NM_003455) 57 NM_003455 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding chr1-771 chr1 184838648 184838858 + 28.6 0.000 intron (NM_052966, intron 5 of 13) intron (NM_052966, intron 5 of 13) -83895 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr11-935 chr11 73383239 73383449 + 28.6 0.000 intron (NM_032871, intron 1 of 10) intron (NM_032871, intron 1 of 10) 6676 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr4-172 chr4 121870312 121870522 + 28.6 0.000 promoter-TSS (NM_018190) promoter-TSS (NM_018190) 57 NM_176824 55212 Hs.591694 NM_018190 ENSG00000138686 BBS7 BBS2L1 Bardet-Biedl syndrome 7 protein-coding chr11-634 chr11 57214599 57214809 + 28.6 0.000 Intergenic Intergenic 22546 NR_027991 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr20-69 chr20 18497095 18497305 + 28.6 0.000 promoter-TSS (NM_006606) promoter-TSS (NM_006606) 25 NM_006606 10741 Hs.69330 NM_006606 ENSG00000089050 RBBP9 BOG|RBBP10 RB binding protein 9, serine hydrolase protein-coding chr14-231 chr14 55137491 55137701 + 28.6 0.000 non-coding (NR_003225, exon 1 of 4) non-coding (NR_003225, exon 1 of 4) 613 NR_003225 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr3-406 chr3 149086362 149086572 + 28.6 0.000 promoter-TSS (NM_003071) promoter-TSS (NM_003071) 66 NM_003071 6596 Hs.3068 NM_003071 ENSG00000071794 HLTF HIP116|HIP116A|HLTF1|RNF80|SMARCA3|SNF2L3|ZBU1 helicase like transcription factor protein-coding chr2-535 chr2 224485392 224485602 + 28.6 0.000 intron (NM_001257197, intron 12 of 14) L1P3|LINE|L1 -83390 NM_001122779 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr2-406 chr2 43251383 43251593 + 28.6 0.000 intron (NM_001083953, intron 36 of 37) intron (NM_001083953, intron 36 of 37) 24277 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr10-332 chr10 17643678 17643888 + 28.6 0.000 promoter-TSS (NM_001324282) promoter-TSS (NM_001324282) 135 NR_110370 102723166 Hs.547311 NR_110370 ENSG00000260589 STAM-AS1 locus3182 STAM antisense RNA 1 (head to head) ncRNA chr11-870 chr11 13261711 13261921 + 28.6 0.000 Intergenic Intergenic -14836 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr16-360 chr16 85202645 85202855 + 28.6 0.000 Intergenic Intergenic -5046 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr20-127 chr20 3470814 3471024 + 28.6 0.000 promoter-TSS (NM_139321) promoter-TSS (NM_139321) -99 NM_001207047 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr2-514 chr2 109600085 109600295 + 28.6 0.000 intron (NM_001321509, intron 1 of 10) ERV3-16A3_LTR|LTR|ERVL 13477 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr15-90 chr15 42273161 42273371 + 28.6 0.000 promoter-TSS (NM_198141) promoter-TSS (NM_198141) 167 NM_015497 25963 Hs.511138 NM_015497 ENSG00000103978 TMEM87A - transmembrane protein 87A protein-coding chr5-241 chr5 395390 395600 + 28.6 0.000 intron (NM_020731, intron 4 of 11) intron (NM_020731, intron 4 of 11) 47665 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr12-520 chr12 51388134 51388344 + 28.6 0.000 intron (NM_007210, intron 2 of 11) intron (NM_007210, intron 2 of 11) -3078 NM_001258401 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr12-441 chr12 49945536 49945746 + 28.6 0.000 Intergenic LTR85c|LTR|Gypsy? -5100 NM_000486 359 Hs.130730 NM_000486 ENSG00000167580 AQP2 AQP-CD|WCH-CD aquaporin 2 protein-coding GL000219.1-2 GL000219.1 99761 99971 + 28.6 0.000 NA NA NA NA chr16-483 chr16 1746208 1746418 + 28.6 0.000 intron (NM_001040439, intron 5 of 30) intron (NM_001040439, intron 5 of 30) 11328 NR_036138 100423012 NR_036138 ENSG00000265820 MIR3177 mir-3177 microRNA 3177 ncRNA chr20-143 chr20 34516423 34516633 + 28.6 0.000 intron (NM_001281727, intron 1 of 3) CpG 144 NM_014183 83658 Hs.593920 NM_014183 ENSG00000125971 DYNLRB1 BITH|BLP|DNCL2A|DNLC2A|ROBLD1 dynein light chain roadblock-type 1 protein-coding chr1-1235 chr1 65821015 65821225 + 28.6 0.000 intron (NM_002600, intron 1 of 16) intron (NM_002600, intron 1 of 16) 28225 NM_002600 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr8-107 chr8 126558361 126558571 + 28.6 0.000 promoter-TSS (NR_156466) promoter-TSS (NR_156466) 12 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr4-356 chr4 98928957 98929167 + 28.6 0.000 promoter-TSS (NM_001130678) promoter-TSS (NM_001130678) 71 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr19-681 chr19 45783087 45783297 + 28.6 0.000 promoter-TSS (NM_001288764) promoter-TSS (NM_001288764) -702 NM_001081562 1760 Hs.631596 NM_004409 ENSG00000104936 DMPK DM|DM1|DM1PK|DMK|MDPK|MT-PK DM1 protein kinase protein-coding chr11-479 chr11 6607112 6607322 + 28.6 0.000 3' UTR (NM_006284, exon 5 of 5) 3' UTR (NM_006284, exon 5 of 5) 3443 NM_001014795 3611 Hs.706355 NM_004517 ENSG00000166333 ILK HEL-S-28|ILK-1|ILK-2|P59|p59ILK integrin linked kinase protein-coding chr9-440 chr9 94681546 94681756 + 28.6 0.000 Intergenic Intergenic -41402 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr12-307 chr12 56152294 56152504 + 28.6 0.000 promoter-TSS (NM_001199629) promoter-TSS (NM_001199629) -188 NM_002475 140465 Hs.632731 NM_002475 ENSG00000196465 MYL6B MLC1SA myosin light chain 6B protein-coding chr1-447 chr1 67685020 67685230 + 28.5 0.000 promoter-TSS (NM_001199742) promoter-TSS (NM_001199742) -76 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr10-177 chr10 102629619 102629829 + 28.5 0.000 intron (NM_016169, intron 11 of 11) intron (NM_016169, intron 11 of 11) -14771 NM_030912 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr12-374 chr12 116319880 116320090 + 28.5 0.000 Intergenic Intergenic -42799 NM_015335 23389 Hs.603766 NM_015335 ENSG00000123066 MED13L MRFACD|PROSIT240|THRAP2|TRAP240L mediator complex subunit 13L protein-coding chr16-630 chr16 70159417 70159627 + 28.5 0.000 3' UTR (NM_017990, exon 19 of 19) 3' UTR (NM_017990, exon 19 of 19) 13926 NR_126007 400541 Hs.461183 NR_126007 ENSG00000247228 LOC400541 - uncharacterized LOC400541 ncRNA chr10-342 chr10 101042764 101042974 + 28.5 0.000 Intergenic Intergenic 11630 NM_030971 81855 Hs.283844 NM_030971 ENSG00000107819 SFXN3 BA108L7.2|SFX3|SLC56A3 sideroflexin 3 protein-coding chr16-515 chr16 49988499 49988709 + 28.5 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -36602 NR_104042 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding chr1-1272 chr1 75765871 75766081 + 28.5 0.000 Intergenic Intergenic -20218 NR_073562 5876 Hs.78948 NM_004582 ENSG00000137955 RABGGTB GGTB Rab geranylgeranyltransferase subunit beta protein-coding chr15-119 chr15 52652002 52652212 + 28.5 0.000 promoter-TSS (NM_001286495) promoter-TSS (NM_001286495) -67 NM_001286495 56204 Hs.152385 NM_019600 ENSG00000047346 FAM214A KIAA1370 family with sequence similarity 214 member A protein-coding chr11-632 chr11 36500488 36500698 + 28.5 0.000 intron (NM_145803, intron 3 of 7) L2a|LINE|L2 9679 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr11-371 chr11 69644428 69644638 + 28.5 0.000 intron (NM_053056, intron 3 of 4) intron (NM_053056, intron 3 of 4) 3428 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr1-203 chr1 94418104 94418314 + 28.5 0.000 promoter-TSS (NM_001122674) promoter-TSS (NM_001122674) -168 NM_001122674 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr6-51 chr6 34244478 34244688 + 28.5 0.000 intron (NM_002131, intron 5 of 5) intron (NM_002131, intron 5 of 5) 3910 NR_106893 102465502 NR_106893 ENSG00000276404 MIR6835 hsa-mir-6835 microRNA 6835 ncRNA chr6-104 chr6 157274906 157275116 + 28.5 0.000 Intergenic CpG 49248 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr10-718 chr10 109282626 109282836 + 28.5 0.000 Intergenic L1M7|LINE|L1 640515 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr20-109 chr20 34825166 34825376 + 28.5 0.000 intron (NM_014071, intron 1 of 14) CpG 380 NM_014071 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding chr20-394 chr20 25407650 25407860 + 28.5 0.000 promoter-TSS (NR_134574) promoter-TSS (NR_134574) 72 NR_134574 9837 Hs.658464 NM_021067 ENSG00000101003 GINS1 IMD55|PSF1 GINS complex subunit 1 protein-coding chr5-338 chr5 81301600 81301810 + 28.5 0.000 promoter-TSS (NR_034121) promoter-TSS (NR_034121) 118 NM_001131035 84240 Hs.15536 NM_032280 ENSG00000131732 ZCCHC9 PPP1R41 zinc finger CCHC-type containing 9 protein-coding chr9-168 chr9 137083420 137083630 + 28.5 0.000 3' UTR (NM_207309, exon 9 of 9) 3' UTR (NM_207309, exon 9 of 9) 3292 NR_027447 100289341 Hs.593896 NR_027447 ENSG00000268996 MAN1B1-DT MAN1B1-AS1 MAN1B1 divergent transcript ncRNA chr17-344 chr17 17280781 17280991 + 28.5 0.000 promoter-TSS (NM_001199125) promoter-TSS (NM_001199125) -188 NM_001199125 8533 Hs.6076 NM_003653 ENSG00000141030 COPS3 CSN3|SGN3 COP9 signalosome subunit 3 protein-coding chr19-403 chr19 34481449 34481659 + 28.5 0.000 promoter-TSS (NM_001080436) promoter-TSS (NM_001080436) -204 NM_001080436 126374 Hs.585010 NM_001080436 ENSG00000142279 WTIP - WT1 interacting protein protein-coding chr6-179 chr6 4358729 4358939 + 28.5 0.000 Intergenic Intergenic -129964 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr19-558 chr19 57279877 57280087 + 28.5 0.000 promoter-TSS (NM_001330622) promoter-TSS (NM_001330622) 15 NM_001330622 10794 Hs.99971 NM_006635 ENSG00000197714 ZNF460 HZF8|ZNF272 zinc finger protein 460 protein-coding chr5-462 chr5 27316335 27316545 + 28.5 0.000 Intergenic Intergenic -155852 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr20-39 chr20 3045953 3046163 + 28.5 0.000 promoter-TSS (NM_030811) promoter-TSS (NM_030811) 6 NM_030811 64949 Hs.18946 NM_030811 ENSG00000125901 MRPS26 C20orf193|GI008|MRP-S13|MRP-S26|MRPS13|NY-BR-87|RPMS13|dJ534B8.3 mitochondrial ribosomal protein S26 protein-coding chr6-192 chr6 42879646 42879856 + 28.5 0.000 non-coding (NR_134562, exon 1 of 7) non-coding (NR_134562, exon 1 of 7) 135 NM_001366481 285855 Hs.520133 NM_198486 ENSG00000146223 RPL7L1 dJ475N16.4 ribosomal protein L7 like 1 protein-coding chr12-316 chr12 51172984 51173194 + 28.5 0.000 promoter-TSS (NM_001173452) promoter-TSS (NM_001173452) 46 NM_001173452 7024 Hs.48849 NM_005653 ENSG00000135457 TFCP2 LBP1C|LSF|LSF1D|SEF|TFCP2C transcription factor CP2 protein-coding chr2-453 chr2 89585605 89585815 + 28.5 0.000 promoter-TSS (NR_160761) promoter-TSS (NR_160761) -45 NR_160763 107985911 NR_160761 LOC107985911 - lymphocyte specific protein 1 pseudogene pseudo chr5-332 chr5 140190591 140190801 + 28.5 0.000 intron (NM_032412, intron 1 of 2) intron (NM_032412, intron 1 of 2) 15508 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr19-575 chr19 51366395 51366605 + 28.5 0.000 promoter-TSS (NM_001985) promoter-TSS (NM_001985) -112 NM_001985 2109 Hs.348531 NM_001985 ENSG00000105379 ETFB FP585|MADD electron transfer flavoprotein subunit beta protein-coding chr16-262 chr16 1182364 1182574 + 28.5 0.000 intron (NM_001005407, intron 2 of 33) intron (NM_001005407, intron 2 of 33) 29228 NM_001005407 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr11-335 chr11 72434397 72434607 + 28.5 0.000 promoter-TSS (NM_001258392) promoter-TSS (NM_001258392) 29 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr10-223 chr10 79826433 79826643 + 28.5 0.000 promoter-TSS (NR_120613) promoter-TSS (NR_120613) 56 NR_120611 101060691 Hs.440648 NR_120611 ENSG00000225484 NUTM2B-AS1 - NUTM2B antisense RNA 1 ncRNA chr22-251 chr22 46829566 46829776 + 28.5 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 55744 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr14-276 chr14 94907900 94908110 + 28.5 0.000 Intergenic Intergenic 137363 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr15-171 chr15 38414428 38414638 + 28.5 0.000 Intergenic Intergenic -39594 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr2-547 chr2 112640926 112641136 + 28.5 0.000 TTS (NR_033871) TTS (NR_033871) 3149 NR_033871 400999 Hs.585221 NR_033871 FLJ42351 - uncharacterized LOC400999 ncRNA chr2-408 chr2 95434618 95434828 + 28.5 0.000 Intergenic Intergenic 32015 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr4-151 chr4 25312655 25312865 + 28.5 0.000 promoter-TSS (NM_024936) promoter-TSS (NM_024936) -14 NM_001318148 29063 Hs.278945 NM_024936 ENSG00000168228 ZCCHC4 HSPC052|ZGRF4 zinc finger CCHC-type containing 4 protein-coding chr9-648 chr9 81559823 81560033 + 28.5 0.000 Intergenic Intergenic 129607 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chrX-83 chrX 153708547 153708757 + 28.5 0.000 intron (NM_005745, intron 4 of 7) intron (NM_005745, intron 4 of 7) 15449 NM_001139457 10134 Hs.522817 NM_005745 ENSG00000185825 BCAP31 6C6-AG|BAP31|CDM|DDCH|DXS1357E B cell receptor associated protein 31 protein-coding chr18-50 chr18 12288026 12288236 + 28.5 0.000 Intergenic Intergenic -19538 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr3-532 chr3 12763484 12763694 + 28.5 0.000 intron (NM_001284406, intron 1 of 11) intron (NM_001284406, intron 1 of 11) -4330 NM_018306 55287 Hs.475502 NM_018306 ENSG00000088726 TMEM40 - transmembrane protein 40 protein-coding chr21-31 chr21 45875136 45875346 + 28.5 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 25280 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr20-189 chr20 34017679 34017889 + 28.5 0.000 intron (NM_007367, intron 1 of 8) intron (NM_007367, intron 1 of 8) -23417 NR_109885 101926888 Hs.405849 NR_109885 ENSG00000285230 RALY-AS1 - RALY antisense RNA 1 ncRNA chr15-129 chr15 89894087 89894297 + 28.5 0.000 promoter-TSS (NR_037582) promoter-TSS (NR_037582) -198 NM_005829 10239 Hs.632161 NM_005829 ENSG00000157823 AP3S2 AP3S3|sigma3b adaptor related protein complex 3 subunit sigma 2 protein-coding chr16-531 chr16 87806777 87806987 + 28.5 0.000 Intergenic Intergenic -27734 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA chr1-640 chr1 204307488 204307698 + 28.5 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 52336 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr13-75 chr13 44577339 44577549 + 28.5 0.000 promoter-TSS (NM_001243799) promoter-TSS (NM_001243799) -879 NM_001243799 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chr9-300 chr9 134536275 134536485 + 28.5 0.000 Intergenic L1MB5|LINE|L1 -105425 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr1-445 chr1 48472151 48472361 + 28.5 0.000 promoter-TSS (NM_001286239) promoter-TSS (NM_001286239) -48 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr2-643 chr2 120937766 120937976 + 28.5 0.000 intron (NM_005270, intron 3 of 13) CR1-L3A_Croc|LINE|CR1 145590 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr17-1027 chr17 49395010 49395220 + 28.5 0.000 Intergenic Intergenic 19743 NM_001281496 5245 Hs.514303 NM_002634 ENSG00000167085 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding chr11-352 chr11 66312019 66312229 + 28.5 0.000 Intergenic CpG 4920 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding chr1-1216 chr1 235199447 235199657 + 28.5 0.000 intron (NM_031371, intron 16 of 22) intron (NM_031371, intron 16 of 22) -9436 NR_039908 100616224 NR_039908 ENSG00000263439 MIR4753 mir-4753 microRNA 4753 ncRNA chr1-582 chr1 16018039 16018249 + 28.5 0.000 5' UTR (NM_001349683, exon 1 of 3) 5' UTR (NM_001349683, exon 1 of 3) 646 NM_001349688 27129 Hs.502612 NM_014424 ENSG00000173641 HSPB7 cvHSP heat shock protein family B (small) member 7 protein-coding chr2-1022 chr2 20062710 20062920 + 28.5 0.000 Intergenic Intergenic -11187 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr16-293 chr16 66873341 66873551 + 28.5 0.000 Intergenic Intergenic -7069 NM_020786 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr5-445 chr5 173455329 173455539 + 28.5 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 107979 NR_107023 102465862 NR_107023 ENSG00000274994 MIR8056 hsa-mir-8056 microRNA 8056 ncRNA chr16-265 chr16 29157143 29157353 + 28.5 0.000 Intergenic Intergenic 82406 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr3-226 chr3 75669163 75669373 + 28.5 0.000 Intergenic CpG -3013 NR_040005 401074 Hs.528540 NR_040004 ENSG00000242516 LINC00960 - long intergenic non-protein coding RNA 960 ncRNA chr3-255 chr3 127589031 127589241 + 28.5 0.000 intron (NM_001353001, intron 1 of 11) intron (NM_001353001, intron 1 of 11) 1597 NR_148226 131601 Hs.6418 NM_016372 ENSG00000163870 TPRA1 GPR175|TMEM227|TPRA40 transmembrane protein adipocyte associated 1 protein-coding chrX-73 chrX 150983059 150983269 + 28.5 0.000 promoter-TSS (NM_001301228) promoter-TSS (NM_001301228) -171 NM_001301229 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr15-107 chr15 85794768 85794978 + 28.5 0.000 promoter-TSS (NM_022480) promoter-TSS (NM_022480) 52 NM_022480 64410 Hs.498371 NM_022480 ENSG00000183655 KLHL25 ENC-2|ENC2 kelch like family member 25 protein-coding chr7-389 chr7 12211089 12211299 + 28.5 0.000 promoter-TSS (NM_018374) promoter-TSS (NM_018374) -100 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr1-692 chr1 33080963 33081173 + 28.5 0.000 promoter-TSS (NR_146648) promoter-TSS (NR_146648) -85 NM_001350400 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr2-634 chr2 203681550 203681760 + 28.5 0.000 Intergenic LTR79|LTR|ERVL -24820 NM_001243078 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr3-717 chr3 11477620 11477830 + 28.5 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 91073 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr19-511 chr19 52638270 52638480 + 28.5 0.000 promoter-TSS (NM_001105549) promoter-TSS (NM_001105549) 16 NM_018300 55769 Hs.467210 NM_018300 ENSG00000167766 ZNF83 HPF1|ZNF816B zinc finger protein 83 protein-coding chr1-704 chr1 244461316 244461526 + 28.5 0.000 promoter-TSS (NM_001242340) promoter-TSS (NM_001242340) 50 NM_001242340 257044 Hs.459534 NM_173807 ENSG00000179397 CATSPERE C10orf101|C1orf101 catsper channel auxiliary subunit epsilon protein-coding chr14-325 chr14 67694846 67695056 + 28.5 0.000 intron (NM_016026, intron 1 of 6) intron (NM_016026, intron 1 of 6) 813 NM_001252650 51109 Hs.719925 NM_016026 ENSG00000072042 RDH11 ARSDR1|CGI82|HCBP12|MDT1|PSDR1|RALR1|RDJCSS|SCALD|SDR7C1 retinol dehydrogenase 11 protein-coding chr17-719 chr17 82536197 82536407 + 28.5 0.000 intron (NM_004514, intron 1 of 8) L1M4|LINE|L1 16570 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr2-522 chr2 20651156 20651366 + 28.5 0.000 promoter-TSS (NM_022460) promoter-TSS (NM_022460) -163 NM_022460 64342 Hs.531785 NM_022460 ENSG00000118960 HS1BP3 ETM2|HS1-BP3 HCLS1 binding protein 3 protein-coding chr16-407 chr16 89557439 89557649 + 28.4 0.000 3' UTR (NM_003119, exon 17 of 17) 3' UTR (NM_003119, exon 17 of 17) -3113 NM_000977 6137 Hs.410817 NM_000977 ENSG00000167526 RPL13 BBC1|D16S444E|D16S44E|L13 ribosomal protein L13 protein-coding chr2-768 chr2 38376581 38376791 + 28.4 0.000 promoter-TSS (NM_001308076) promoter-TSS (NM_001308076) -156 NM_001308076 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr1-610 chr1 19210326 19210536 + 28.4 0.000 promoter-TSS (NR_135115) promoter-TSS (NR_135115) 45 NR_135115 101927895 Hs.660534 NR_135114 ENSG00000230424 EMC1-AS1 - EMC1 antisense RNA 1 ncRNA chr4-313 chr4 7371552 7371762 + 28.4 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 61207 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr22-246 chr22 46058694 46058904 + 28.4 0.000 TTS (NR_027034) TTS (NR_027034) 4953 NR_027034 150381 Hs.659113 NR_027034 PRR34-AS1 - PRR34 antisense RNA 1 ncRNA chr3-656 chr3 88957966 88958176 + 28.4 0.000 Intergenic Intergenic -149550 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr7-486 chr7 131604886 131605096 + 28.4 0.000 Intergenic Intergenic -48363 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr15-150 chr15 75367839 75368049 + 28.4 0.000 intron (NM_001256496, intron 2 of 23) intron (NM_001256496, intron 2 of 23) 663 NM_006715 4123 Hs.26232 NM_006715 ENSG00000140400 MAN2C1 MAN6A8|MANA|MANA1 mannosidase alpha class 2C member 1 protein-coding chr9-414 chr9 6681203 6681413 + 28.4 0.000 Intergenic CpG -35616 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr22-212 chr22 41598162 41598372 + 28.4 0.000 3' UTR (NM_015704, exon 6 of 6) 3' UTR (NM_015704, exon 6 of 6) -8427 NM_002676 5372 Hs.75835 NM_002676 ENSG00000100417 PMM1 PMM 1|PMMH-22|Sec53 phosphomannomutase 1 protein-coding chr2-370 chr2 234960275 234960485 + 28.4 0.000 intron (NM_014521, intron 1 of 5) intron (NM_014521, intron 1 of 5) -4959 NM_001371302 chr13-138 chr13 49606999 49607209 + 28.4 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -21403 NM_138450 115761 Hs.558599 NM_138450 ENSG00000152213 ARL11 ARLTS1 ADP ribosylation factor like GTPase 11 protein-coding chr12-235 chr12 6937972 6938182 + 28.4 0.000 intron (NM_001940, intron 6 of 9) intron (NM_001940, intron 6 of 9) -5361 NM_001301836 113246 Hs.405913 NM_138425 ENSG00000111678 C12orf57 C10|GRCC10 chromosome 12 open reading frame 57 protein-coding chr2-672 chr2 235660100 235660310 + 28.4 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -142284 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr11-262 chr11 72080578 72080788 + 28.4 0.000 promoter-TSS (NM_006185) promoter-TSS (NM_006185) 10 NM_001286561 4926 Hs.325978 NM_006185 ENSG00000137497 NUMA1 NMP-22|NUMA nuclear mitotic apparatus protein 1 protein-coding chrX-61 chrX 48958406 48958616 + 28.4 0.000 promoter-TSS (NM_001136158) promoter-TSS (NM_001136158) -130 NM_001136159 55593 Hs.496098 NM_017602 ENSG00000068308 OTUD5 DUBA OTU deubiquitinase 5 protein-coding chr11-689 chr11 75348057 75348267 + 28.4 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 3499 NM_020251 408 Hs.503284 NM_004041 ENSG00000137486 ARRB1 ARB1|ARR1 arrestin beta 1 protein-coding chr19-553 chr19 8308117 8308327 + 28.4 0.000 TTS (NR_135539) TTS (NR_135539) 136 NM_016579 51293 Hs.558499 NM_016579 ENSG00000167775 CD320 8D6|8D6A|TCBLR|TCN2R CD320 molecule protein-coding chr18-94 chr18 59788142 59788352 + 28.4 0.000 Intergenic Intergenic -90824 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr12-201 chr12 121399874 121400084 + 28.4 0.000 promoter-TSS (NM_001256858) promoter-TSS (NM_001256858) -104 NM_025126 80196 Hs.292804 NM_025126 ENSG00000170633 RNF34 CARP-1|CARP1|RFI|RIF|RIFF|hRFI ring finger protein 34 protein-coding chr11-511 chr11 128553015 128553225 + 28.4 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 26978 NR_120581 101929517 Hs.562320 NR_120581 ENSG00000254588 ETS1-AS1 pancEts-1 ETS1 antisense RNA 1 ncRNA chr17-1075 chr17 2955132 2955342 + 28.4 0.000 intron (NM_001330058, intron 3 of 24) L1MB5|LINE|L1 10658 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr4-194 chr4 105808701 105808911 + 28.4 0.000 intron (NM_001370181, intron 5 of 11) MER44C|DNA|TcMar-Tigger 18366 NR_125927 101929529 Hs.603751 NR_125927 ENSG00000251175 LOC101929529 - uncharacterized LOC101929529 ncRNA chr10-364 chr10 12195900 12196110 + 28.4 0.000 promoter-TSS (NM_014142) promoter-TSS (NM_014142) -114 NM_014142 11164 Hs.555956 NM_014142 ENSG00000165609 NUDT5 YSA1|YSA1H|YSAH1|hNUDT5 nudix hydrolase 5 protein-coding chr2-716 chr2 152646884 152647094 + 28.4 0.000 intron (NM_052905, intron 25 of 25) intron (NM_052905, intron 25 of 25) 70472 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr15-283 chr15 63857100 63857310 + 28.4 0.000 Intergenic MIRb|SINE|MIR 13814 NR_029944 494334 NR_029944 ENSG00000199156 MIR422A MIRN422A microRNA 422a ncRNA chr17-1203 chr17 77963538 77963748 + 28.4 0.000 Intergenic Intergenic -40594 NM_018996 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr16-349 chr16 88857809 88858019 + 28.4 0.000 promoter-TSS (NM_001323543) promoter-TSS (NM_001323543) 787 NM_001318532 51693 Hs.461722 NM_016209 ENSG00000167515 TRAPPC2L HSPC176|PERRB trafficking protein particle complex 2 like protein-coding chr2-570 chr2 151774577 151774787 + 28.4 0.000 Intergenic Intergenic -40195 NM_001164508 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr22-304 chr22 45435598 45435808 + 28.4 0.000 Intergenic Intergenic 22010 NM_015653 26150 Hs.475110 NM_015653 ENSG00000128408 RIBC2 C22orf11|TRIB RIB43A domain with coiled-coils 2 protein-coding chr16-345 chr16 31052238 31052448 + 28.4 0.000 Intergenic Intergenic 12745 NM_001172669 79759 Hs.102928 NM_024706 ENSG00000167394 ZNF668 - zinc finger protein 668 protein-coding chr15-223 chr15 63338204 63338414 + 28.4 0.000 intron (NM_001218, intron 8 of 10) intron (NM_001218, intron 8 of 10) 43537 NR_135511 771 Hs.210995 NM_001218 ENSG00000074410 CA12 CA-XII|CAXII|HsT18816|T18816 carbonic anhydrase 12 protein-coding chr11-818 chr11 46916930 46917140 + 28.4 0.000 intron (NM_002334, intron 1 of 37) intron (NM_002334, intron 1 of 37) 1515 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chr19-714 chr19 39078727 39078937 + 28.4 0.000 Intergenic Intergenic -5536 NM_001004318 390928 Hs.448934 NM_001004318 ENSG00000183760 ACP7 PAPL|PAPL1 acid phosphatase 7, tartrate resistant (putative) protein-coding chr20-144 chr20 49230899 49231109 + 28.4 0.000 intron (NM_017895, intron 9 of 20) L2b|LINE|L2 11709 NM_017895 55661 Hs.65234 NM_017895 ENSG00000124228 DDX27 DRS1|Drs1p|HSPC259|PP3241|RHLP|dJ686N3.1 DEAD-box helicase 27 protein-coding chr17-428 chr17 31571360 31571570 + 28.4 0.000 Intergenic Intergenic -3804 NR_039878 100616449 NR_039878 ENSG00000265976 MIR4725 mir-4725 microRNA 4725 ncRNA chr1-1197 chr1 92754010 92754220 + 28.4 0.000 intron (NM_001308248, intron 1 of 18) intron (NM_001308248, intron 1 of 18) 30993 NM_001350197 7813 Hs.594434 NM_005665 ENSG00000067208 EVI5 EVI-5|NB4S ecotropic viral integration site 5 protein-coding chr22-214 chr22 46762414 46762624 + 28.4 0.000 promoter-TSS (NM_014346) promoter-TSS (NM_014346) -98 NM_001284304 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr16-499 chr16 1309109 1309319 + 28.4 0.000 promoter-TSS (NM_003345) promoter-TSS (NM_003345) 62 NM_194260 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr16-190 chr16 74607106 74607316 + 28.4 0.000 promoter-TSS (NM_012201) promoter-TSS (NM_012201) -97 NM_001145667 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr3-204 chr3 141231571 141231781 + 28.4 0.000 promoter-TSS (NM_152282) promoter-TSS (NM_152282) -149 NM_001282728 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr17-527 chr17 948604 948814 + 28.4 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 31067 NM_022463 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr1-563 chr1 21703700 21703910 + 28.4 0.000 intron (NM_001350167, intron 20 of 26) AluJr4|SINE|Alu -34448 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr10-129 chr10 93702401 93702611 + 28.4 0.000 promoter-TSS (NR_144635) promoter-TSS (NR_144635) 66 NM_001347715 118924 Hs.586650 NM_145246 ENSG00000148690 FRA10AC1 C10orf4|F26C11.1-like|FRA10A FRA10A associated CGG repeat 1 protein-coding chr3-399 chr3 53238312 53238522 + 28.4 0.000 intron (NM_001258028, intron 4 of 14) intron (NM_001258028, intron 4 of 14) 17605 NM_001064 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr1-703 chr1 241253602 241253812 + 28.4 0.000 intron (NM_001282778, intron 2 of 16) intron (NM_001282778, intron 2 of 16) 102119 NM_001350116 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr8-555 chr8 47638959 47639169 + 28.4 0.000 intron (NM_001080394, intron 10 of 19) intron (NM_001080394, intron 10 of 19) -15024 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr11-525 chr11 118195238 118195448 + 28.4 0.000 intron (NM_001098526, intron 9 of 9) intron (NM_001098526, intron 9 of 9) 17603 NM_153206 120425 Hs.16291 NM_153206 ENSG00000160593 JAML AMICA|AMICA1|CREA7-1|CREA7-4|Gm638 junction adhesion molecule like protein-coding chr5-391 chr5 140700205 140700415 + 28.4 0.000 promoter-TSS (NM_144723) promoter-TSS (NM_144723) -137 NM_144723 153527 Hs.350194 NM_144723 ENSG00000146007 ZMAT2 Ptg-12|Snu23 zinc finger matrin-type 2 protein-coding chr6-216 chr6 27132792 27133002 + 28.4 0.000 promoter-TSS (NM_021064) promoter-TSS (NM_021064) -101 NM_021058 8970 Hs.591807 NM_021058 ENSG00000124635 HIST1H2BJ H2B/r|H2BFR|H2BJ histone cluster 1 H2B family member j protein-coding chr10-425 chr10 126931192 126931402 + 28.4 0.000 intron (NM_001290223, intron 1 of 51) intron (NM_001290223, intron 1 of 51) 25888 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr5-355 chr5 54050008 54050218 + 28.4 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) -98514 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr3-763 chr3 73419629 73419839 + 28.4 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) 14261 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr2-654 chr2 32277875 32278085 + 28.4 0.000 promoter-TSS (NM_032312) promoter-TSS (NM_032312) 76 NM_032312 84272 Hs.468099 NM_032312 ENSG00000119820 YIPF4 FinGER4|Nbla11189 Yip1 domain family member 4 protein-coding chr8-185 chr8 108443386 108443596 + 28.4 0.000 promoter-TSS (NM_001329493) promoter-TSS (NM_001329493) -92 NM_001329494 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr12-157 chr12 88035541 88035751 + 28.3 0.000 5' UTR (NM_001009894, exon 1 of 7) 5' UTR (NM_001009894, exon 1 of 7) 110 NM_001009894 91298 Hs.591009 NM_001009894 ENSG00000133641 C12orf29 - chromosome 12 open reading frame 29 protein-coding chr12-588 chr12 25352297 25352507 + 28.3 0.000 Intergenic L1P4|LINE|L1 -101473 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr3-467 chr3 53220104 53220314 + 28.3 0.000 Intergenic Intergenic 35813 NM_001064 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr4-340 chr4 185306111 185306321 + 28.3 0.000 intron (NM_001317781, intron 6 of 18) intron (NM_001317781, intron 6 of 18) 72782 NM_018409 55805 Hs.558513 NM_018409 ENSG00000109771 LRP2BP - LRP2 binding protein protein-coding chr20-117 chr20 17747407 17747617 + 28.3 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 47564 NM_178477 140836 Hs.115366 NM_178477 ENSG00000125888 BANF2 BAF-L|BAF2|BAFL|C20orf179 barrier to autointegration factor 2 protein-coding chr3-582 chr3 9347878 9348088 + 28.3 0.000 Intergenic Intergenic -15071 NM_001114092 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding chr14-215 chr14 68956742 68956952 + 28.3 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 22455 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr4-405 chr4 110480234 110480444 + 28.3 0.000 intron (NM_001977, intron 1 of 19) intron (NM_001977, intron 1 of 19) 4184 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr22-264 chr22 45516834 45517044 + 28.3 0.000 intron (NM_006487, intron 1 of 14) intron (NM_006487, intron 1 of 14) 14056 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr16-626 chr16 29976293 29976503 + 28.3 0.000 intron (NM_004783, intron 1 of 18) intron (NM_004783, intron 1 of 18) 2530 NM_016151 9344 Hs.291623 NM_004783 ENSG00000149930 TAOK2 MAP3K17|PSK|PSK1|PSK1-BETA|TAO1|TAO2 TAO kinase 2 protein-coding chr3-453 chr3 25266994 25267204 + 28.3 0.000 intron (NM_001290216, intron 4 of 10) intron (NM_001290216, intron 4 of 10) -73703 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr14-113 chr14 102086958 102087168 + 28.3 0.000 promoter-TSS (NM_005348) promoter-TSS (NM_005348) -19 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr17-758 chr17 80826986 80827196 + 28.3 0.000 intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -21459 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr1-833 chr1 221478124 221478334 + 28.3 0.000 Intergenic Intergenic -141933 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr18-106 chr18 57542895 57543105 + 28.3 0.000 Intergenic Intergenic 43702 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr8-165 chr8 26383075 26383285 + 28.3 0.000 promoter-TSS (NR_144550) promoter-TSS (NR_144550) 126 NM_004331 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr12-653 chr12 51949733 51949943 + 28.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -1861 NM_004302 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr7-671 chr7 6443752 6443962 + 28.3 0.000 intron (NM_001142936, intron 2 of 12) intron (NM_001142936, intron 2 of 12) 4097 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr4-183 chr4 47463546 47463756 + 28.3 0.000 promoter-TSS (NM_017845) promoter-TSS (NM_017845) 51 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chr4-86 chr4 127965237 127965447 + 28.3 0.000 promoter-TSS (NM_001319305) promoter-TSS (NM_001319305) -64 NM_001366038 80167 Hs.143995 NM_025097 ENSG00000164074 ABHD18 C4orf29 abhydrolase domain containing 18 protein-coding chr19-614 chr19 40810837 40811047 + 28.3 0.000 non-coding (NR_144551, exon 1 of 2) non-coding (NR_144551, exon 1 of 2) 158 NR_144551 171523 Hs.656713 NR_144551 ENSG00000233622 CYP2T1P CYP2T2P cytochrome P450 family 2 subfamily T member 1, pseudogene pseudo chr17-601 chr17 73325517 73325727 + 28.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -13621 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr22-327 chr22 39471697 39471907 + 28.3 0.000 intron (NM_002409, intron 1 of 1) intron (NM_002409, intron 1 of 1) 5020 NR_126469 104502417 Hs.586031 NR_126469 ENSG00000227188 MGAT3-AS1 TapSAKI MGAT3 antisense RNA 1 ncRNA chr1-763 chr1 54253634 54253844 + 28.3 0.000 intron (NM_018070, intron 6 of 16) intron (NM_018070, intron 6 of 16) 17296 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr4-391 chr4 139607083 139607293 + 28.3 0.000 Intergenic Intergenic -50419 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr10-340 chr10 80459195 80459405 + 28.3 0.000 promoter-TSS (NM_001351269) promoter-TSS (NM_001351269) -85 NM_001351269 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr14-376 chr14 89724397 89724607 + 28.3 0.000 Intergenic Intergenic -105337 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr8-263 chr8 142699739 142699949 + 28.3 0.000 promoter-TSS (NM_001160354) promoter-TSS (NM_001160354) -267 NM_001160355 54742 Hs.69517 NM_017527 ENSG00000160886 LY6K CT97|HSJ001348|URLC10|ly-6K lymphocyte antigen 6 family member K protein-coding chr7-381 chr7 66493480 66493690 + 28.3 0.000 promoter-TSS (NR_134573) promoter-TSS (NR_134573) -47 NR_134573 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr19-571 chr19 17215397 17215607 + 28.3 0.000 exon (NM_018467, exon 1 of 8) exon (NM_018467, exon 1 of 8) 145 NM_018467 55850 Hs.16187 NM_018467 ENSG00000053501 USE1 D12|MDS032|P31|SLT1 unconventional SNARE in the ER 1 protein-coding chr8-329 chr8 22781304 22781514 + 28.3 0.000 intron (NM_001363233, intron 4 of 6) intron (NM_001363233, intron 4 of 6) -87929 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr2-852 chr2 27771649 27771859 + 28.3 0.000 promoter-TSS (NM_004891) promoter-TSS (NM_004891) 35 NM_004891 9553 Hs.515879 NM_004891 ENSG00000243147 MRPL33 C2orf1|L33mt|MRP-L33|RPL33L mitochondrial ribosomal protein L33 protein-coding chr2-575 chr2 235749173 235749383 + 28.3 0.000 intron (NM_001037131, intron 5 of 17) intron (NM_001037131, intron 5 of 17) -231357 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr19-470 chr19 49850753 49850963 + 28.3 0.000 promoter-TSS (NM_017432) promoter-TSS (NM_017432) 123 NR_130963 53635 Hs.587979 NM_017432 ENSG00000104960 PTOV1 ACID2|PTOV-1 PTOV1 extended AT-hook containing adaptor protein protein-coding chr5-272 chr5 126778342 126778552 + 28.3 0.000 intron (NR_134488, intron 1 of 11) CpG 1311 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr1-702 chr1 230798042 230798252 + 28.3 0.000 intron (NM_016452, intron 17 of 18) intron (NM_016452, intron 17 of 18) 50759 NM_006615 10753 Hs.498021 NM_006615 ENSG00000135773 CAPN9 GC36|nCL-4 calpain 9 protein-coding chr19-562 chr19 8355713 8355923 + 28.3 0.000 Intergenic Intergenic -8337 NR_104213 51129 Hs.9613 NM_016109 ENSG00000167772 ANGPTL4 ARP4|FIAF|HARP|HFARP|NL2|PGAR|TGQTL|UNQ171|pp1158 angiopoietin like 4 protein-coding chr15-135 chr15 70892541 70892751 + 28.3 0.000 promoter-TSS (NM_020147) promoter-TSS (NM_020147) 203 NM_001363732 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr12-721 chr12 11989211 11989421 + 28.3 0.000 Intergenic L1MA5A|LINE|L1 -60545 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr11-429 chr11 66126836 66127046 + 28.3 0.000 intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 56669 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr16-503 chr16 18926485 18926695 + 28.3 0.000 promoter-TSS (NM_015092) promoter-TSS (NM_015092) -186 NM_015092 23049 Hs.460179 NM_015092 ENSG00000157106 SMG1 61E3.4|ATX|LIP SMG1 nonsense mediated mRNA decay associated PI3K related kinase protein-coding chr13-93 chr13 110870137 110870347 + 28.3 0.000 promoter-TSS (NR_027701) promoter-TSS (NR_027701) 66 NR_027701 283487 Hs.245390 NM_178514 ENSG00000255874 LINC00346 C13orf29|NCRNA00346 long intergenic non-protein coding RNA 346 ncRNA chr3-627 chr3 14452145 14452355 + 28.3 0.000 intron (NR_103507, intron 5 of 13) MIRb|SINE|MIR 49644 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr4-223 chr4 140037581 140037791 + 28.3 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -90329 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr14-234 chr14 104680943 104681153 + 28.3 0.000 Intergenic Intergenic -3299 NR_039860 100616300 NR_039860 ENSG00000265291 MIR4710 mir-4710 microRNA 4710 ncRNA chr12-262 chr12 108515120 108515330 + 28.3 0.000 promoter-TSS (NM_007076) promoter-TSS (NM_007076) -52 NM_007076 11153 Hs.661891 NM_007076 ENSG00000198855 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding chr12-608 chr12 65941511 65941721 + 28.3 0.000 intron (NM_001300918, intron 3 of 4) intron (NM_001300918, intron 3 of 4) -59291 NR_158985 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr4-376 chr4 108620291 108620501 + 28.3 0.000 promoter-TSS (NM_001319236) promoter-TSS (NM_001319236) 61 NR_026968 285456 Hs.683863 NM_182591 ENSG00000234492 RPL34-AS1 - RPL34 antisense RNA 1 (head to head) ncRNA chr22-269 chr22 29394993 29395203 + 28.2 0.000 Intergenic Intergenic -6515 NM_145730 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr22-204 chr22 38718554 38718764 + 28.2 0.000 intron (NM_004286, intron 4 of 11) intron (NM_004286, intron 4 of 11) 12715 NM_004286 9567 Hs.276925 NM_004286 ENSG00000100226 GTPBP1 GP-1|GP1|HSPC018 GTP binding protein 1 protein-coding chr17-308 chr17 45161650 45161860 + 28.2 0.000 promoter-TSS (NM_001303441) promoter-TSS (NM_001303441) -90 NM_001303440 124790 Hs.56382 NM_144608 ENSG00000168517 HEXIM2 L3 HEXIM P-TEFb complex subunit 2 protein-coding chr12-348 chr12 98418652 98418862 + 28.2 0.000 Intergenic Intergenic 38388 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr7-529 chr7 134693365 134693575 + 28.2 0.000 Intergenic Intergenic 46617 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr19-606 chr19 5935329 5935539 + 28.2 0.000 intron (NM_003624, intron 5 of 16) intron (NM_003624, intron 5 of 16) 21180 NM_004058 828 Hs.584744 NM_004058 ENSG00000105519 CAPS CAPS1 calcyphosine protein-coding chr17-408 chr17 78592495 78592705 + 28.2 0.000 Intergenic Intergenic -15206 NM_173628 8632 Hs.375975 NM_003727 ENSG00000187775 DNAH17 DNAHL1|DNEL2 dynein axonemal heavy chain 17 protein-coding chr19-572 chr19 36850230 36850440 + 28.2 0.000 promoter-TSS (NM_001242801) promoter-TSS (NM_001242801) -23 NM_003419 25850 Hs.362324 NM_003419 ENSG00000251247 ZNF345 HZF10 zinc finger protein 345 protein-coding chr15-137 chr15 95972346 95972556 + 28.2 0.000 Intergenic Intergenic 155390 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr22-289 chr22 46229852 46230062 + 28.2 0.000 intron (NM_001001928, intron 6 of 7) intron (NM_001001928, intron 6 of 7) 20336 NM_207327 150383 Hs.103110 NM_207327 ENSG00000205643 CDPF1 C22orf40 cysteine rich DPF motif domain containing 1 protein-coding chr6-333 chr6 36986397 36986607 + 28.2 0.000 promoter-TSS (NM_001271641) promoter-TSS (NM_001271641) 49 NM_014341 23787 Hs.485262 NM_014341 ENSG00000137409 MTCH1 CGI-64|PIG60|PSAP|SLC25A49 mitochondrial carrier 1 protein-coding chr6-240 chr6 117675270 117675480 + 28.2 0.000 promoter-TSS (NR_110854) promoter-TSS (NR_110854) -91 NR_110854 101927919 Hs.467500 NR_110854 LOC101927919 - uncharacterized LOC101927919 ncRNA chr17-545 chr17 75774182 75774392 + 28.2 0.000 Intergenic Intergenic 5492 NM_005324 3021 Hs.180877 NM_005324 ENSG00000132475 H3F3B H3.3B H3 histone family member 3B protein-coding chrX-111 chrX 151903310 151903520 + 28.2 0.000 Intergenic Intergenic 7668 NR_136578 105373368 Hs.256904 NR_136578 MAGEA4-AS1 - MAGEA4 antisense RNA 1 ncRNA chr4-141 chr4 10018950 10019160 + 28.2 0.000 exon (NM_020041, exon 2 of 12) exon (NM_020041, exon 2 of 12) 2442 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr7-391 chr7 66205136 66205346 + 28.2 0.000 promoter-TSS (NM_003596) promoter-TSS (NM_003596) -93 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr12-330 chr12 51270888 51271098 + 28.2 0.000 promoter-TSS (NM_001033873) promoter-TSS (NM_001033873) -578 NM_001031628 57228 Hs.652389 NM_001031628 ENSG00000170545 SMAGP hSMAGP small cell adhesion glycoprotein protein-coding chr1-488 chr1 228103292 228103502 + 28.2 0.000 promoter-TSS (NM_024319) promoter-TSS (NM_024319) -72 NR_130975 79169 Hs.445952 NM_024319 ENSG00000143793 C1orf35 MMTAG2 chromosome 1 open reading frame 35 protein-coding chr9-86 chr9 127981002 127981212 + 28.2 0.000 promoter-TSS (NM_001035254) promoter-TSS (NM_001035254) -118 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr1-1054 chr1 119080658 119080868 + 28.2 0.000 intron (NM_015836, intron 1 of 5) intron (NM_015836, intron 1 of 5) 33358 NR_126447 104472716 Hs.689536 NR_126447 WARS2-IT1 - WARS2 intronic transcript 1 ncRNA chr15-196 chr15 41930698 41930908 + 28.2 0.000 intron (NM_139265, intron 3 of 5) intron (NM_139265, intron 3 of 5) 9386 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr10-394 chr10 46228678 46228888 + 28.2 0.000 intron (NR_103828, intron 2 of 2) L1PA17|LINE|L1 40825 NR_103827 100996567 Hs.546758 NR_103827 ANTXRLP1 - ANTXR like pseudogene 1 pseudo chr2-1035 chr2 37768578 37768788 + 28.2 0.000 Intergenic Intergenic 61028 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr18-24 chr18 9334559 9334769 + 28.2 0.000 promoter-TSS (NM_020648) promoter-TSS (NM_020648) -109 NM_020648 57045 Hs.514685 NM_020648 ENSG00000128791 TWSG1 TSG twisted gastrulation BMP signaling modulator 1 protein-coding chr19-285 chr19 56567505 56567715 + 28.2 0.000 5' UTR (NM_001001668, exon 1 of 6) 5' UTR (NM_001001668, exon 1 of 6) 142 NM_001001668 388566 Hs.204449 NM_001001668 ENSG00000197016 ZNF470 CZF-1 zinc finger protein 470 protein-coding chr11-628 chr11 102225920 102226130 + 28.2 0.000 intron (NM_001130145, intron 7 of 8) intron (NM_001130145, intron 7 of 8) -91459 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr19-479 chr19 3098502 3098712 + 28.2 0.000 intron (NM_002067, intron 1 of 6) intron (NM_002067, intron 1 of 6) 4245 NM_002067 2767 Hs.650575 NM_002067 ENSG00000088256 GNA11 FBH|FBH2|FHH2|GNA-11|HHC2|HYPOC2 G protein subunit alpha 11 protein-coding chr12-546 chr12 108629939 108630149 + 28.2 0.000 intron (NM_003006, intron 1 of 1) intron (NM_003006, intron 1 of 1) 2037 NM_001206609 6404 Hs.591014 NM_003006 ENSG00000110876 SELPLG CD162|CLA|PSGL-1|PSGL1 selectin P ligand protein-coding chr16-289 chr16 89602363 89602573 + 28.2 0.000 Intergenic Intergenic -10840 NM_001128141 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr11-381 chr11 72223274 72223484 + 28.2 0.000 Intergenic CpG -1388 NM_001567 3636 Hs.523875 NM_001567 ENSG00000165458 INPPL1 OPSMD|SHIP2 inositol polyphosphate phosphatase like 1 protein-coding chr17-152 chr17 44200219 44200429 + 28.2 0.000 Intergenic CpG -2163 NM_001098833 56970 Hs.512651 NM_020218 ENSG00000087152 ATXN7L3 - ataxin 7 like 3 protein-coding chr14-261 chr14 23352694 23352904 + 28.2 0.000 promoter-TSS (NM_001289050) promoter-TSS (NM_001289050) 113 NM_016609 51310 Hs.373498 NM_016609 ENSG00000092096 SLC22A17 24p3R|BOCT|BOIT|NGALR|NGALR2|NGALR3|hBOIT solute carrier family 22 member 17 protein-coding chr1-1100 chr1 155729187 155729397 + 28.2 0.000 exon (NM_033657, exon 9 of 13) exon (NM_033657, exon 9 of 13) -16476 NR_024117 100129405 Hs.656361 NR_024117 MSTO2P MSTO2 misato family member 2, pseudogene pseudo chr14-100 chr14 100297450 100297660 + 28.2 0.000 intron (NM_001352823, intron 2 of 5) intron (NM_001352823, intron 2 of 5) 8889 NM_001291813 123096 Hs.578109 NM_152333 ENSG00000197119 SLC25A29 C14orf69|CACL|ORNT3 solute carrier family 25 member 29 protein-coding chr1-711 chr1 39398706 39398916 + 28.2 0.000 intron (NM_012090, intron 52 of 92) intron (NM_012090, intron 52 of 92) -10262 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr2-342 chr2 72115640 72115850 + 28.2 0.000 Intergenic Intergenic 32117 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr8-145 chr8 123274816 123275026 + 28.2 0.000 promoter-TSS (NR_037874) promoter-TSS (NR_037874) -434 NM_001017926 11244 Hs.521800 NM_007222 ENSG00000165156 ZHX1 - zinc fingers and homeoboxes 1 protein-coding chr17-236 chr17 6444181 6444391 + 28.2 0.000 promoter-TSS (NM_001195228) promoter-TSS (NM_001195228) -169 NM_019013 54478 Hs.592116 NM_019013 ENSG00000129195 PIMREG CATS|FAM64A|RCS1 PICALM interacting mitotic regulator protein-coding chr16-463 chr16 48127247 48127457 + 28.2 0.000 intron (NM_033226, intron 9 of 28) intron (NM_033226, intron 9 of 28) 19418 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr5-313 chr5 122415620 122415830 + 28.2 0.000 intron (NM_001308109, intron 3 of 7) intron (NM_001308109, intron 3 of 7) 24636 NM_001308105 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr11-347 chr11 12541114 12541324 + 28.2 0.000 Intergenic Intergenic -133202 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr2-428 chr2 160666475 160666685 + 28.2 0.000 Intergenic Intergenic -172773 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr1-749 chr1 161390276 161390486 + 28.2 0.000 Intergenic CpG -22498 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr11-494 chr11 33452877 33453087 + 28.2 0.000 intron (NM_012194, intron 1 of 20) intron (NM_012194, intron 1 of 20) 76874 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr1-539 chr1 31170815 31171025 + 28.2 0.000 Intergenic Intergenic 68967 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr9-266 chr9 134135329 134135539 + 28.2 0.000 promoter-TSS (NM_017588) promoter-TSS (NM_017588) -648 NM_017588 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr17-301 chr17 76103404 76103614 + 28.2 0.000 promoter-TSS (NM_001282313) promoter-TSS (NM_001282313) 62 NM_001282313 23265 Hs.514496 NM_015219 ENSG00000182473 EXOC7 2-5-3p|BLOM4|EX070|EXO70|EXOC1|Exo70p|YJL085W exocyst complex component 7 protein-coding chr9-349 chr9 94914203 94914413 + 28.2 0.000 intron (NM_032823, intron 5 of 14) Charlie8|DNA|hAT-Charlie 31246 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr6-273 chr6 110179855 110180065 + 28.2 0.000 promoter-TSS (NM_015891) promoter-TSS (NM_015891) 44 NM_001024936 8936 Hs.75850 NM_003931 ENSG00000112290 WASF1 SCAR1|WAVE|WAVE1 WASP family member 1 protein-coding chr16-268 chr16 588723 588933 + 28.2 0.000 promoter-TSS (NM_001172663) promoter-TSS (NM_001172663) -529 NM_001172663 57799 Hs.459630 NM_021168 ENSG00000197562 RAB40C RARL|RASL8C RAB40C, member RAS oncogene family protein-coding chr1-994 chr1 3703471 3703681 + 28.2 0.000 intron (NM_001204192, intron 1 of 11) intron (NM_001204192, intron 1 of 11) 5530 NM_001204192 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr14-492 chr14 89912777 89912987 + 28.2 0.000 intron (NM_001284269, intron 5 of 5) intron (NM_001284269, intron 5 of 5) 41654 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr19-554 chr19 13150276 13150486 + 28.2 0.000 promoter-TSS (NM_004907) promoter-TSS (NM_004907) -6 NM_001271611 8677 Hs.43812 NM_003765 ENSG00000104915 STX10 SYN10|hsyn10 syntaxin 10 protein-coding chr14-307 chr14 64788721 64788931 + 28.2 0.000 intron (NM_001024858, intron 14 of 34) L3b|LINE|CR1 -3140 NR_107009 102465841 NR_107009 ENSG00000284269 MIR7855 hsa-mir-7855 microRNA 7855 ncRNA chr1-805 chr1 6276494 6276704 + 28.2 0.000 intron (NM_181866, intron 8 of 8) intron (NM_181866, intron 8 of 8) -15501 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr14-226 chr14 96204696 96204906 + 28.2 0.000 promoter-TSS (NM_000623) promoter-TSS (NM_000623) 3 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr10-300 chr10 119892623 119892833 + 28.2 0.000 promoter-TSS (NR_037771) promoter-TSS (NR_037771) -2 NM_007190 11196 Hs.435004 NM_007190 ENSG00000107651 SEC23IP MSTP053|P125|P125A SEC23 interacting protein protein-coding chr19-663 chr19 21852038 21852248 + 28.2 0.000 promoter-TSS (NM_001256648) promoter-TSS (NM_001256648) -75 NM_001256653 7594 Hs.534365 NM_003423 ENSG00000198521 ZNF43 HTF6|KOX27|ZNF39L1 zinc finger protein 43 protein-coding chr9-254 chr9 89318745 89318955 + 28.0 0.000 promoter-TSS (NM_001282690) promoter-TSS (NM_001282690) -1 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr12-500 chr12 14257721 14257931 + 28.0 0.000 Intergenic Intergenic -107806 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr15-212 chr15 85177312 85177522 + 28.0 0.000 Intergenic LTR18B|LTR|ERVL 57364 NR_158179 101929479 Hs.681665 NR_158179 LOC101929479 - golgin A2 pseudogene pseudo chr3-521 chr3 72273720 72273930 + 28.0 0.000 Intergenic Intergenic 122568 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr4-136 chr4 99950472 99950682 + 28.0 0.000 promoter-TSS (NR_125923) promoter-TSS (NR_125923) 83 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chr19-379 chr19 2819653 2819863 + 28.0 0.000 promoter-TSS (NM_001102651) promoter-TSS (NM_001102651) -110 NM_001102651 115196 Hs.307043 NM_152303 ENSG00000172006 ZNF554 - zinc finger protein 554 protein-coding chr10-163 chr10 123008871 123009081 + 28.0 0.000 promoter-TSS (NR_073479) promoter-TSS (NR_073479) -30 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chr7-532 chr7 16740335 16740545 + 28.0 0.000 Intergenic Intergenic -13315 NM_014399 27075 Hs.364544 NM_014399 ENSG00000106537 TSPAN13 NET-6|NET6|TM4SF13 tetraspanin 13 protein-coding chr21-137 chr21 26148964 26149174 + 28.0 0.000 intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) -8679 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr17-213 chr17 17512008 17512218 + 28.0 0.000 intron (NM_148173, intron 4 of 6) intron (NM_148173, intron 4 of 6) -15718 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr2-769 chr2 39938525 39938735 + 28.0 0.000 intron (NR_038441, intron 2 of 4) MIRc|SINE|MIR 20996 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr1-816 chr1 96362768 96362978 + 28.0 0.000 intron (NR_110693, intron 1 of 5) L2a|LINE|L2 11252 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr6-319 chr6 18216609 18216819 + 28.0 0.000 intron (NM_001364614, intron 20 of 21) MER44B|DNA|TcMar-Tigger 47816 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr16-246 chr16 68245269 68245479 + 28.0 0.000 promoter-TSS (NM_001363551) promoter-TSS (NM_001363551) 1 NM_012320 23659 Hs.632199 NM_012320 ENSG00000103066 PLA2G15 ACS|GXVPLA2|LLPL|LPLA2|LYPLA3 phospholipase A2 group XV protein-coding chr11-708 chr11 86748323 86748533 + 28.0 0.000 Intergenic Intergenic -42643 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr2-882 chr2 37713421 37713631 + 28.0 0.000 Intergenic MER44B|DNA|TcMar-Tigger -40991 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr19-302 chr19 11505171 11505381 + 28.0 0.000 TTS (NM_016581) TTS (NM_016581) 563 NM_138783 115950 Hs.465928 NM_138783 ENSG00000161914 ZNF653 E430039K05Rik|ZIP67 zinc finger protein 653 protein-coding chr1-927 chr1 117093277 117093487 + 28.0 0.000 intron (NM_003594, intron 18 of 22) intron (NM_003594, intron 18 of 22) -1261 NR_030640 100126331 NR_030640 ENSG00000215930 MIR942 MIRN942|hsa-mir-942|mir-942 microRNA 942 ncRNA chr19-468 chr19 40716940 40717150 + 28.0 0.000 promoter-TSS (NM_024876) promoter-TSS (NM_024876) -67 NM_025194 80271 Hs.515415 NM_025194 ENSG00000086544 ITPKC IP3-3KC|IP3KC inositol-trisphosphate 3-kinase C protein-coding chr3-293 chr3 149812942 149813152 + 28.0 0.000 5' UTR (NM_183381, exon 1 of 10) 5' UTR (NM_183381, exon 1 of 10) 359 NM_183383 11342 Hs.12333 NM_007282 ENSG00000082996 RNF13 EIEE73|RZF ring finger protein 13 protein-coding chr19-472 chr19 1354698 1354908 + 28.0 0.000 promoter-TSS (NM_001369791) promoter-TSS (NM_001369791) -156 NM_032853 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr11-621 chr11 65911723 65911933 + 28.0 0.000 Intergenic Intergenic 7234 NM_031450 83638 Hs.433573 NM_031450 ENSG00000175573 C11orf68 BLES03|P5326 chromosome 11 open reading frame 68 protein-coding chr15-74 chr15 72117616 72117826 + 28.0 0.000 promoter-TSS (NM_145204) promoter-TSS (NM_145204) 429 NM_006901 4649 Hs.513000 NM_006901 ENSG00000066933 MYO9A CMS24 myosin IXA protein-coding chr1-919 chr1 44294676 44294886 + 28.0 0.000 intron (NM_001301698, intron 5 of 7) intron (NM_001301698, intron 5 of 7) -42222 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr2-484 chr2 152718322 152718532 + 28.0 0.000 promoter-TSS (NM_001365597) promoter-TSS (NM_001365597) 103 NR_146426 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr15-291 chr15 41777616 41777826 + 28.0 0.000 intron (NR_049762, intron 2 of 28) intron (NR_049762, intron 2 of 28) 3237 NR_049762 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr2-731 chr2 46543999 46544209 + 28.0 0.000 intron (NM_012249, intron 2 of 4) intron (NM_012249, intron 2 of 4) -1527 NM_001371282 chr10-478 chr10 93030511 93030721 + 28.0 0.000 intron (NM_001319195, intron 20 of 21) intron (NM_001319195, intron 20 of 21) -30182 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr7-245 chr7 73715725 73715935 + 28.0 0.000 intron (NM_001165903, intron 1 of 9) intron (NM_001165903, intron 1 of 9) 3839 NM_004603 6804 Hs.647024 NM_004603 ENSG00000106089 STX1A HPC-1|P35-1|STX1|SYN1A syntaxin 1A protein-coding chr16-659 chr16 4013498 4013708 + 28.0 0.000 intron (NM_001116, intron 2 of 10) intron (NM_001116, intron 2 of 10) -63159 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr13-110 chr13 113814285 113814495 + 28.0 0.000 3' UTR (NM_182614, exon 9 of 9) 3' UTR (NM_182614, exon 9 of 9) -1220 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr12-230 chr12 39619861 39620071 + 28.0 0.000 promoter-TSS (NM_005164) promoter-TSS (NM_005164) -163 NM_005164 225 Hs.117852 NM_005164 ENSG00000173208 ABCD2 ABC39|ALDL1|ALDR|ALDRP|hALDR ATP binding cassette subfamily D member 2 protein-coding chr14-178 chr14 49862901 49863111 + 28.0 0.000 promoter-TSS (NR_027260) promoter-TSS (NR_027260) -157 NR_027260 378706 NR_027260 ENSG00000274012 RN7SL2 7L1C|7L30.1|7SL1c|RNSRP2 RNA component of signal recognition particle 7SL2 scRNA chr17-569 chr17 19144425 19144635 + 28.0 0.000 intron (NM_001353418, intron 3 of 3) (AC)n|Simple_repeat|Simple_repeat 16941 NM_001129778 400581 Hs.647426 NM_001129778 ENSG00000189152 GRAPL - GRB2 related adaptor protein like protein-coding chr18-163 chr18 2411491 2411701 + 28.0 0.000 Intergenic MLT2D|LTR|ERVL 159909 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr19-566 chr19 17135556 17135766 + 28.0 0.000 intron (NM_001130065, intron 2 of 39) intron (NM_001130065, intron 2 of 39) 43426 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chrX-67 chrX 68832033 68832243 + 28.0 0.000 intron (NM_004429, intron 1 of 4) intron (NM_004429, intron 1 of 4) 3141 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr8-178 chr8 98825452 98825662 + 28.0 0.000 5' UTR (NM_001256313, exon 1 of 9) 5' UTR (NM_001256313, exon 1 of 9) 114 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr2-417 chr2 217965998 217966208 + 28.0 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -12604 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr19-618 chr19 58098214 58098424 + 28.0 0.000 promoter-TSS (NM_023926) promoter-TSS (NM_023926) 44 NM_023926 65982 Hs.235390 NM_023926 ENSG00000121413 ZSCAN18 ZNF447 zinc finger and SCAN domain containing 18 protein-coding chr3-446 chr3 149934636 149934846 + 28.0 0.000 intron (NM_183383, intron 7 of 8) AluJb|SINE|Alu 36154 NM_053024 5217 Hs.91747 NM_002628 ENSG00000070087 PFN2 D3S1319E|PFL profilin 2 protein-coding chr12-174 chr12 69689160 69689370 + 28.0 0.000 promoter-TSS (NM_152439) promoter-TSS (NM_152439) 12 NM_152439 144453 Hs.280782 NM_032735 ENSG00000127325 BEST3 VMD2L3 bestrophin 3 protein-coding chr11-584 chr11 34106083 34106293 + 28.0 0.000 intron (NM_001144030, intron 1 of 26) intron (NM_001144030, intron 1 of 26) 559 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr12-527 chr12 92759942 92760152 + 28.0 0.000 intron (NM_001004330, intron 8 of 11) MLT1J|LTR|ERVL-MaLR 23558 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 - pleckstrin homology and RhoGEF domain containing G7 protein-coding chr17-333 chr17 6651541 6651751 + 28.0 0.000 promoter-TSS (NM_016060) promoter-TSS (NM_016060) -41 NM_016060 51003 Hs.567493 NM_016060 ENSG00000108590 MED31 3110004H13Rik|CGI-125|Soh1 mediator complex subunit 31 protein-coding chr9-211 chr9 70258757 70258967 + 28.0 0.000 promoter-TSS (NM_015110) promoter-TSS (NM_015110) 12 NR_039990 100507299 Hs.556816 NR_039990 SMC5-AS1 MAMDC2-AS2 SMC5 antisense RNA 1 (head to head) ncRNA chr2-648 chr2 230957332 230957542 + 28.0 0.000 Intergenic MER44C|DNA|TcMar-Tigger -32195 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr22-230 chr22 20509401 20509611 + 28.0 0.000 intron (NM_001293237, intron 1 of 16) intron (NM_001293237, intron 1 of 16) 1459 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr9-428 chr9 81842757 81842967 + 28.0 0.000 Intergenic Intergenic -70575 NR_026851 347127 Hs.215235 NM_198509 ENSG00000240632 SPATA31D5P FAM75D5|FAM75D5P SPATA31 subfamily D member 5, pseudogene pseudo chr11-510 chr11 128522626 128522836 + 28.0 0.000 promoter-TSS (NM_001162422) promoter-TSS (NM_001162422) 341 NR_106738 102466104 NR_106738 ENSG00000276176 MIR6090 hsa-mir-6090 microRNA 6090 ncRNA chr10-461 chr10 80472428 80472638 + 28.0 0.000 intron (NM_001351270, intron 2 of 9) L1MC4|LINE|L1 4270 NM_001351271 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr17-516 chr17 13351088 13351298 + 28.0 0.000 Intergenic Intergenic -44433 NR_146885 105371541 NR_146885 ENSG00000234634 LINC02093 - long intergenic non-protein coding RNA 2093 ncRNA chr8-200 chr8 140588875 140589085 + 27.9 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 46653 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr11-436 chr11 130069416 130069626 + 27.9 0.000 promoter-TSS (NM_001328685) promoter-TSS (NM_001328685) -373 NM_001328686 334 Hs.370247 NM_001642 ENSG00000084234 APLP2 APLP-2|APPH|APPL2|CDEBP amyloid beta precursor like protein 2 protein-coding chr7-421 chr7 47786721 47786931 + 27.9 0.000 intron (NM_138295, intron 56 of 56) intron (NM_138295, intron 56 of 56) -8465 NR_161269 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr19-619 chr19 753210 753420 + 27.9 0.000 intron (NR_135168, intron 1 of 3) intron (NR_135168, intron 1 of 3) 2203 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr13-87 chr13 40921394 40921604 + 27.9 0.000 non-coding (NR_003365, exon 2 of 3) non-coding (NR_003365, exon 2 of 3) 251 NR_038258 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo chr10-519 chr10 123043458 123043668 + 27.9 0.000 intron (NM_001609, intron 6 of 10) intron (NM_001609, intron 6 of 10) 34557 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chr8-513 chr8 122414006 122414216 + 27.9 0.000 TTS (NR_131202) TTS (NR_131202) 154533 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr19-516 chr19 6736690 6736900 + 27.9 0.000 promoter-TSS (NR_106849) promoter-TSS (NR_106849) -17 NR_106849 102465474 NR_106849 ENSG00000283950 MIR6791 hsa-mir-6791 microRNA 6791 ncRNA chr21-86 chr21 36977172 36977382 + 27.9 0.000 intron (NM_001352515, intron 1 of 10) intron (NM_001352515, intron 1 of 10) 3620 NM_001352516 3141 Hs.371350 NM_000411 ENSG00000159267 HLCS HCS holocarboxylase synthetase protein-coding chr1-1056 chr1 152036941 152037151 + 27.9 0.000 promoter-TSS (NM_005620) promoter-TSS (NM_005620) -42 NM_005620 6282 Hs.417004 NM_005620 ENSG00000163191 S100A11 HEL-S-43|MLN70|S100C S100 calcium binding protein A11 protein-coding chr1-503 chr1 224434826 224435036 + 27.9 0.000 promoter-TSS (NM_001115113) promoter-TSS (NM_001115113) 82 NR_136294 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr11-748 chr11 79466441 79466651 + 27.9 0.000 Intergenic Intergenic -25516 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr16-234 chr16 74368044 74368254 + 27.9 0.000 non-coding (NR_026950, exon 1 of 15) non-coding (NR_026950, exon 1 of 15) 106 NR_026950 283922 Hs.558726 NR_026950 ENSG00000214331 LOC283922 - pyruvate dehydrogenase phosphatase regulatory subunit pseudogene pseudo chr22-181 chr22 47154795 47155005 + 27.9 0.000 intron (NM_001284305, intron 12 of 12) intron (NM_001284305, intron 12 of 12) -190671 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr1-317 chr1 40257965 40258175 + 27.9 0.000 promoter-TSS (NM_005857) promoter-TSS (NM_005857) -166 NM_005857 10269 Hs.132642 NM_005857 ENSG00000084073 ZMPSTE24 FACE-1|FACE1|HGPS|PRO1|STE24|Ste24p zinc metallopeptidase STE24 protein-coding chr8-332 chr8 29958312 29958522 + 27.9 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -1069 NR_036104 100422876 NR_036104 ENSG00000264788 MIR3148 mir-3148 microRNA 3148 ncRNA chr1-277 chr1 42958946 42959156 + 27.9 0.000 promoter-TSS (NR_033967) promoter-TSS (NR_033967) 2 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr20-26 chr20 62122049 62122259 + 27.9 0.000 promoter-TSS (NM_144703) promoter-TSS (NM_144703) -321 NM_144703 149986 Hs.105379 NM_144703 ENSG00000149657 LSM14B C20orf40|FAM61B|FT005|LSM13|RAP55B|bA11M20.3 LSM family member 14B protein-coding chr10-288 chr10 122494987 122495197 + 27.9 0.000 intron (NM_002775, intron 3 of 8) intron (NM_002775, intron 3 of 8) 33539 NM_002775 5654 Hs.501280 NM_002775 ENSG00000166033 HTRA1 ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11 HtrA serine peptidase 1 protein-coding chr7-444 chr7 139341142 139341352 + 27.9 0.000 promoter-TSS (NM_197964) promoter-TSS (NM_197964) -90 NM_197964 154791 Hs.718441 NM_197964 ENSG00000164898 FMC1 C7orf55|HSPC268 formation of mitochondrial complex V assembly factor 1 homolog protein-coding chr18-141 chr18 23437423 23437633 + 27.9 0.000 intron (NM_032933, intron 1 of 14) intron (NM_032933, intron 1 of 14) 433 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr2-585 chr2 127525626 127525836 + 27.9 0.000 intron (NM_017969, intron 1 of 13) intron (NM_017969, intron 1 of 13) 758 NM_017969 55677 Hs.469879 NM_017969 ENSG00000163166 IWS1 - interacts with SUPT6H, CTD assembly factor 1 protein-coding chr21-42 chr21 31659487 31659697 + 27.9 0.000 promoter-TSS (NM_000454) promoter-TSS (NM_000454) -30 NM_000454 6647 Hs.443914 NM_000454 ENSG00000142168 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1 protein-coding chr1-436 chr1 231241150 231241360 + 27.9 0.000 promoter-TSS (NM_014236) promoter-TSS (NM_014236) 43 NM_014236 8443 Hs.498028 NM_014236 ENSG00000116906 GNPAT DAP-AT|DAPAT|DHAPAT|RCDP2 glyceronephosphate O-acyltransferase protein-coding chr16-277 chr16 29131336 29131546 + 27.9 0.000 Intergenic Intergenic 56599 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr9-132 chr9 129225825 129226035 + 27.9 0.000 Intergenic Intergenic -47669 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr22-232 chr22 37525383 37525593 + 27.9 0.000 Intergenic Intergenic -6073 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr8-457 chr8 119683471 119683681 + 27.9 0.000 Intergenic Intergenic -10186 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr15-262 chr15 33985418 33985628 + 27.9 0.000 intron (NM_001320917, intron 1 of 1) LTR40c|LTR|ERVL 17026 NM_012125 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr9-434 chr9 121902601 121902811 + 27.9 0.000 intron (NM_001139442, intron 6 of 8) intron (NM_001139442, intron 6 of 8) 159921 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr12-244 chr12 53205864 53206074 + 27.9 0.000 intron (NM_000889, intron 1 of 15) intron (NM_000889, intron 1 of 15) 1282 NM_000889 3695 Hs.654470 NM_000889 ENSG00000139626 ITGB7 - integrin subunit beta 7 protein-coding chr20-279 chr20 24992766 24992976 + 27.9 0.000 promoter-TSS (NM_020531) promoter-TSS (NM_020531) -120 NM_020531 57136 Hs.472330 NM_020531 ENSG00000101474 APMAP BSCv|C20orf3 adipocyte plasma membrane associated protein protein-coding chr1-728 chr1 238485922 238486132 + 27.9 0.000 promoter-TSS (NR_015407) promoter-TSS (NR_015407) -10 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr1-892 chr1 77832991 77833201 + 27.9 0.000 intron (NM_198549, intron 7 of 15) intron (NM_198549, intron 7 of 15) 53291 NM_001363583 374986 Hs.437755 NM_198549 ENSG00000180488 MIGA1 FAM73A mitoguardin 1 protein-coding chr13-89 chr13 52652672 52652882 + 27.9 0.000 promoter-TSS (NM_006704) promoter-TSS (NM_006704) -59 NM_001320831 10910 Hs.281902 NM_006704 ENSG00000165416 SUGT1 SGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone protein-coding chr1-1057 chr1 153986934 153987144 + 27.9 0.000 promoter-TSS (NM_002870) promoter-TSS (NM_002870) -700 NR_073553 5872 Hs.151536 NM_002870 ENSG00000143545 RAB13 GIG4 RAB13, member RAS oncogene family protein-coding chr1-1592 chr1 44894700 44894910 + 27.9 0.000 intron (NM_001166588, intron 6 of 9) intron (NM_001166588, intron 6 of 9) -51552 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr17-209 chr17 75904888 75905098 + 27.9 0.000 5' UTR (NM_032478, exon 1 of 9) 5' UTR (NM_032478, exon 1 of 9) 107 NM_032478 64978 Hs.442609 NM_032478 ENSG00000204316 MRPL38 HSPC262|L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding chr18-222 chr18 45783481 45783691 + 27.9 0.000 Intergenic Intergenic -42089 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr16-615 chr16 89150758 89150968 + 27.9 0.000 intron (NR_104293, intron 10 of 10) intron (NR_104293, intron 10 of 10) -8357 NR_024347 283860 Hs.739138 NM_173617 ENSG00000180422 LINC00304 C16orf81|NCRNA00304 long intergenic non-protein coding RNA 304 ncRNA chr16-298 chr16 30896276 30896486 + 27.9 0.000 promoter-TSS (NM_001142544) promoter-TSS (NM_001142544) -226 NM_001330 1489 Hs.483811 NM_001330 ENSG00000150281 CTF1 CT-1|CT1 cardiotrophin 1 protein-coding chr8-348 chr8 23356172 23356382 + 27.9 0.000 intron (NM_002318, intron 3 of 13) L3|LINE|CR1 20069 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr16-451 chr16 67966896 67967106 + 27.9 0.000 promoter-TSS (NM_001145964) promoter-TSS (NM_001145964) -207 NM_001145964 6560 Hs.10094 NM_005072 ENSG00000124067 SLC12A4 CTC-479C5.17|KCC1|hKCC1 solute carrier family 12 member 4 protein-coding chr1-657 chr1 231528352 231528562 + 27.9 0.000 promoter-TSS (NR_028399) promoter-TSS (NR_028399) -196 NR_028394 100303453 Hs.13318 NR_028393 ENSG00000270106 TSNAX-DISC1 - TSNAX-DISC1 readthrough (NMD candidate) ncRNA chr2-1346 chr2 197180253 197180463 + 27.9 0.000 intron (NM_153697, intron 2 of 9) MER102b|DNA|hAT-Charlie -17633 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr2-1023 chr2 20149369 20149579 + 27.9 0.000 Intergenic MIRb|SINE|MIR 75656 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr2-350 chr2 201780971 201781181 + 27.9 0.000 promoter-TSS (NM_001135745) promoter-TSS (NM_001135745) -143 NM_020919 57679 Hs.471096 NM_020919 ENSG00000003393 ALS2 ALS2CR6|ALSJ|IAHSP|PLSJ alsin Rho guanine nucleotide exchange factor ALS2 protein-coding chr17-387 chr17 77365823 77366033 + 27.9 0.000 intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) -7409 NM_001113493 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr11-715 chr11 14381100 14381310 + 27.9 0.000 Intergenic CpG -16699 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr1-1611 chr1 89260775 89260985 + 27.9 0.000 intron (NM_001134486, intron 10 of 10) intron (NM_001134486, intron 10 of 10) 11980 NM_001134486 115362 Hs.513726 NM_052942 ENSG00000154451 GBP5 GBP-5 guanylate binding protein 5 protein-coding chr22-136 chr22 18077795 18078005 + 27.9 0.000 promoter-TSS (NM_001127649) promoter-TSS (NM_001127649) -20 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr10-117 chr10 131981987 131982197 + 27.9 0.000 promoter-TSS (NM_004052) promoter-TSS (NM_004052) -79 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr11-337 chr11 111977290 111977500 + 27.9 0.000 promoter-TSS (NM_033425) promoter-TSS (NM_033425) 86 NM_033425 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr16-338 chr16 66660766 66660976 + 27.9 0.000 intron (NM_181521, intron 1 of 3) intron (NM_181521, intron 1 of 3) 35872 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr5-207 chr5 6633112 6633322 + 27.9 0.000 promoter-TSS (NR_136739) promoter-TSS (NR_136739) -173 NM_001193455 54888 Hs.481526 NM_017755 ENSG00000037474 NSUN2 MISU|MRT5|SAKI|TRM4 NOP2/Sun RNA methyltransferase 2 protein-coding chr3-212 chr3 12967887 12968097 + 27.9 0.000 promoter-TSS (NM_014869) promoter-TSS (NM_014869) -262 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr22-367 chr22 35638541 35638751 + 27.9 0.000 Intergenic Intergenic -9800 NM_030641 80830 Hs.257352 NM_030641 ENSG00000221963 APOL6 APOL-VI|APOLVI apolipoprotein L6 protein-coding chr21-51 chr21 33588826 33589036 + 27.9 0.000 promoter-TSS (NM_017613) promoter-TSS (NM_017613) -247 NM_017613 29980 Hs.436341 NM_017613 ENSG00000159147 DONSON B17|C21orf60|MIMIS|MISSLA downstream neighbor of SON protein-coding chr2-664 chr2 109318795 109319005 + 27.9 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -5275 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr16-156 chr16 2673588 2673798 + 27.9 0.000 promoter-TSS (NR_040023) promoter-TSS (NR_040023) -254 NR_040023 100507321 Hs.406976 NM_001012731 ERVK13-1 - endogenous retrovirus group K13 member 1 ncRNA chr7-748 chr7 107874659 107874869 + 27.9 0.000 Intergenic Intergenic -16343 NM_001289752 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr19-568 chr19 18571548 18571758 + 27.9 0.000 promoter-TSS (NM_001321022) promoter-TSS (NM_001321022) -77 NM_001321017 7311 Hs.5308 NM_003333 ENSG00000221983 UBA52 CEP52|HUBCEP52|L40|RPL40 ubiquitin A-52 residue ribosomal protein fusion product 1 protein-coding chr6-196 chr6 136594069 136594279 + 27.9 0.000 intron (NM_005923, intron 21 of 29) intron (NM_005923, intron 21 of 29) -34940 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr15-392 chr15 44102741 44102951 + 27.9 0.000 intron (NM_001286490, intron 1 of 15) intron (NM_001286490, intron 1 of 15) 91600 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr3-722 chr3 32577665 32577875 + 27.9 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -6846 NM_001329135 51143 Hs.529495 NM_016141 ENSG00000144635 DYNC1LI1 DLC-A|DNCLI1|LIC1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding chr2-531 chr2 127675707 127675917 + 27.9 0.000 promoter-TSS (NM_001161403) promoter-TSS (NM_001161403) -282 NM_001136037 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr15-182 chr15 74787900 74788110 + 27.9 0.000 promoter-TSS (NM_001354988) promoter-TSS (NM_001354988) -539 NM_001354988 1445 Hs.77793 NM_004383 ENSG00000103653 CSK - C-terminal Src kinase protein-coding chr6-174 chr6 158488123 158488333 + 27.9 0.000 intron (NM_020245, intron 8 of 13) intron (NM_020245, intron 8 of 13) -48208 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr4-455 chr4 156615021 156615231 + 27.9 0.000 Intergenic Intergenic 356673 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr4-72 chr4 99060282 99060492 + 27.9 0.000 intron (NM_015143, intron 10 of 10) AluY|SINE|Alu 28401 NM_000671 128 Hs.78989 NM_000671 ENSG00000197894 ADH5 ADH-3|ADHX|FALDH|FDH|GSH-FDH|GSNOR|HEL-S-60p alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding chr18-73 chr18 59123777 59123987 + 27.9 0.000 Intergenic Intergenic -16002 NM_001307941 90701 Hs.45107 NM_033280 ENSG00000166562 SEC11C SEC11L3|SPC21|SPCS4C SEC11 homolog C, signal peptidase complex subunit protein-coding chr4-402 chr4 13484407 13484617 + 27.9 0.000 promoter-TSS (NM_001159601) promoter-TSS (NM_001159601) -147 NM_001159601 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr8-258 chr8 100847530 100847740 + 27.9 0.000 Intergenic Intergenic 102936 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr6-226 chr6 133552003 133552213 + 27.9 0.000 intron (NR_109982, intron 5 of 8) intron (NR_109982, intron 5 of 8) -269039 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr22-405 chr22 26894935 26895145 + 27.9 0.000 Intergenic Intergenic -8252 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA chr8-124 chr8 144517905 144518115 + 27.9 0.000 promoter-TSS (NM_004260) promoter-TSS (NM_004260) 18 NM_001272036 9684 Hs.459391 NM_014665 ENSG00000160959 LRRC14 LRRC14A leucine rich repeat containing 14 protein-coding chr6-798 chr6 14499907 14500117 + 27.9 0.000 Intergenic Intergenic -214558 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr13-136 chr13 114314278 114314488 + 27.9 0.000 promoter-TSS (NM_032436) promoter-TSS (NM_032436) -120 NM_001164145 283489 Hs.7542 NM_032436 ENSG00000198824 CHAMP1 C13orf8|CAMP|CHAMP|MRD40|ZNF828 chromosome alignment maintaining phosphoprotein 1 protein-coding chr7-462 chr7 44385427 44385637 + 27.9 0.000 3' UTR (NM_015332, exon 6 of 6) 3' UTR (NM_015332, exon 6 of 6) -59901 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr3-264 chr3 128095326 128095536 + 27.8 0.000 intron (NM_003707, intron 8 of 10) intron (NM_003707, intron 8 of 10) 19621 NR_046645 100874089 Hs.581603 NR_046645 ENSG00000239608 RUVBL1-AS1 - RUVBL1 antisense RNA 1 ncRNA chr5-457 chr5 150214286 150214496 + 27.8 0.000 Intergenic Intergenic 24329 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr1-895 chr1 151062849 151063059 + 27.8 0.000 intron (NM_006818, intron 1 of 1) intron (NM_006818, intron 1 of 1) 3279 NM_006818 10962 Hs.75823 NM_006818 ENSG00000213190 MLLT11 AF1Q MLLT11 transcription factor 7 cofactor protein-coding chr17-400 chr17 2336384 2336594 + 27.8 0.000 5' UTR (NM_018128, exon 1 of 15) 5' UTR (NM_018128, exon 1 of 15) 895 NM_018128 55720 Hs.388170 NM_018128 ENSG00000167721 TSR1 - TSR1 ribosome maturation factor protein-coding chr3-584 chr3 18153620 18153830 + 27.8 0.000 intron (NR_161333, intron 4 of 4) MLT2B5|LTR|ERVL 191173 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr10-477 chr10 89328304 89328514 + 27.8 0.000 intron (NM_001549, intron 1 of 1) intron (NM_001549, intron 1 of 1) 412 NM_001289758 3437 Hs.47338 NM_001549 ENSG00000119917 IFIT3 CIG-49|GARG-49|IFI60|IFIT4|IRG2|ISG60|P60|RIG-G|cig41 interferon induced protein with tetratricopeptide repeats 3 protein-coding chr1-585 chr1 51506609 51506819 + 27.8 0.000 intron (NM_001981, intron 1 of 24) intron (NM_001981, intron 1 of 24) 12552 NM_001981 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding chr17-310 chr17 75131563 75131773 + 27.8 0.000 promoter-TSS (NM_014595) promoter-TSS (NM_014595) 74 NR_045513 30833 Hs.67201 NM_014595 ENSG00000125458 NT5C DNT|DNT1|HEL74|P5N2|PN-I|PN-II|UMPH2|cdN|dNT-1 5', 3'-nucleotidase, cytosolic protein-coding chr20-84 chr20 6005843 6006053 + 27.8 0.000 promoter-TSS (NM_001323564) promoter-TSS (NM_001323564) 10 NM_001323562 54675 Hs.743956 NM_019095 ENSG00000088766 CRLS1 C20orf155|CLS|CLS1|GCD10|dJ967N21.6 cardiolipin synthase 1 protein-coding chr6-407 chr6 152381228 152381438 + 27.8 0.000 exon (NM_033071, exon 56 of 146) exon (NM_033071, exon 56 of 146) 803 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr1-769 chr1 156126142 156126352 + 27.8 0.000 promoter-TSS (NM_001257374) promoter-TSS (NM_001257374) 77 NM_001257374 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr5-590 chr5 138355022 138355232 + 27.8 0.000 intron (NM_016604, intron 1 of 23) intron (NM_016604, intron 1 of 23) 2442 NM_016604 51780 Hs.483486 NM_016604 ENSG00000120733 KDM3B 5qNCA|C5orf7|JMJD1B|NET22 lysine demethylase 3B protein-coding chr1-832 chr1 209583629 209583839 + 27.8 0.000 promoter-TSS (NM_020439) promoter-TSS (NM_020439) 20 NM_020439 57172 Hs.199068 NM_020439 ENSG00000008118 CAMK1G CLICK3|CLICKIII|VWS1|dJ272L16.1 calcium/calmodulin dependent protein kinase IG protein-coding chr12-302 chr12 125049650 125049860 + 27.8 0.000 Intergenic CpG -15680 NM_001319840 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr15-173 chr15 48331467 48331677 + 27.8 0.000 promoter-TSS (NM_001948) promoter-TSS (NM_001948) 143 NM_001025248 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr6-363 chr6 154410802 154411012 + 27.8 0.000 intron (NM_001368116, intron 11 of 12) intron (NM_001368116, intron 11 of 12) 23166 NM_001368119 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr1-814 chr1 67339845 67340055 + 27.8 0.000 intron (NM_001319233, intron 9 of 15) intron (NM_001319233, intron 9 of 15) 32586 NM_001258215 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr5-337 chr5 14240404 14240614 + 27.8 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 97167 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr1-831 chr1 206766475 206766685 + 27.8 0.000 Intergenic Intergenic -4193 NM_153758 29949 Hs.661017 NM_013371 ENSG00000142224 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding chr20-37 chr20 36835728 36835938 + 27.8 0.000 intron (NM_199181, intron 2 of 14) intron (NM_199181, intron 2 of 14) 24040 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr13-142 chr13 21297925 21298135 + 27.8 0.000 promoter-TSS (NR_038939) promoter-TSS (NR_038939) 61 NM_001365454 101928764 NM_001365454 LOC101928764 - coiled-coil domain-containing protein 144B protein-coding chr16-258 chr16 10080502 10080712 + 27.8 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 101460 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr6-184 chr6 128932112 128932322 + 27.8 0.000 intron (NM_000426, intron 1 of 64) intron (NM_000426, intron 1 of 64) 49076 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr2-482 chr2 126657933 126658143 + 27.8 0.000 intron (NM_016815, intron 1 of 2) intron (NM_016815, intron 1 of 2) 1880 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr20-57 chr20 35284589 35284799 + 27.8 0.000 promoter-TSS (NM_001267810) promoter-TSS (NM_001267810) 23 NM_001267810 3692 Hs.743992 NM_002212 ENSG00000242372 EIF6 CAB|EIF3A|ITGB4BP|b(2)gcn|eIF-6|p27(BBP)|p27BBP eukaryotic translation initiation factor 6 protein-coding chr2-548 chr2 113963088 113963298 + 27.8 0.000 TTS (NM_005721) TTS (NM_005721) -6129 NR_148507 440900 Hs.662205 NR_034128 ENSG00000234199 LINC01191 VIN|lnc-ACTR3 long intergenic non-protein coding RNA 1191 ncRNA chr11-448 chr11 6638038 6638248 + 27.8 0.000 intron (NM_003737, intron 2 of 20) intron (NM_003737, intron 2 of 20) 17666 NM_003737 8642 Hs.199850 NM_003737 ENSG00000166341 DCHS1 CDH19|CDH25|CDHR6|FIB1|MVP2|PCDH16|VMLDS1 dachsous cadherin-related 1 protein-coding chr15-177 chr15 91515549 91515759 + 27.8 0.000 Intergenic Intergenic 52315 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr7-260 chr7 112450831 112451041 + 27.8 0.000 intron (NM_001007245, intron 2 of 12) CpG 428 NR_120333 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr2-530 chr2 118738679 118738889 + 27.8 0.000 Intergenic Intergenic 109399 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr4-445 chr4 80171315 80171525 + 27.8 0.000 Intergenic L1MB4|LINE|L1 -13850 NM_020226 56978 Hs.373642 NM_020226 ENSG00000152784 PRDM8 EPM10|KMT8D|PFM5 PR/SET domain 8 protein-coding chr10-293 chr10 66925927 66926137 + 27.8 0.000 promoter-TSS (NM_178011) promoter-TSS (NM_178011) -4 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr13-376 chr13 76696495 76696705 + 27.8 0.000 Intergenic Intergenic 189805 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr20-46 chr20 32207708 32207918 + 27.8 0.000 promoter-TSS (NM_015352) promoter-TSS (NM_015352) -67 NM_172236 23509 Hs.472409 NM_015352 ENSG00000101346 POFUT1 DDD2|FUT12|O-FUT|O-Fuc-T|O-FucT-1|OFUCT1 protein O-fucosyltransferase 1 protein-coding chr5-147 chr5 149805914 149806124 + 27.8 0.000 intron (NM_001172699, intron 1 of 10) intron (NM_001172699, intron 1 of 10) 34079 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr4-325 chr4 33262841 33263051 + 27.8 0.000 Intergenic Intergenic 776947 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chrX-182 chrX 74008410 74008620 + 27.8 0.000 intron (NR_024582, intron 3 of 4) L1M4b|LINE|L1 64191 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator ncRNA chr11-1221 chr11 46865509 46865719 + 27.8 0.000 intron (NM_002334, intron 34 of 37) intron (NM_002334, intron 34 of 37) 19203 NR_038909 100507401 Hs.675301 NR_038909 ENSG00000247675 LRP4-AS1 - LRP4 antisense RNA 1 ncRNA chr22-156 chr22 38201975 38202185 + 27.8 0.000 promoter-TSS (NM_012323) promoter-TSS (NM_012323) 86 NM_012323 23764 Hs.517617 NM_012323 ENSG00000185022 MAFF U-MAF|hMafF MAF bZIP transcription factor F protein-coding chr1-1196 chr1 56832433 56832643 + 27.8 0.000 Intergenic Intergenic -13134 NM_001004303 199920 Hs.437655 NM_001004303 ENSG00000187889 FYB2 ARAP|C1orf168 FYN binding protein 2 protein-coding chr14-97 chr14 60165248 60165458 + 27.8 0.000 promoter-TSS (NM_016029) promoter-TSS (NM_016029) 45 NM_016029 51635 Hs.59719 NM_016029 ENSG00000100612 DHRS7 CGI-86|SDR34C1|retDSR4|retSDR4 dehydrogenase/reductase 7 protein-coding chr5-201 chr5 108382325 108382535 + 27.8 0.000 promoter-TSS (NM_001163315) promoter-TSS (NM_001163315) -332 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr3-145 chr3 141738101 141738311 + 27.8 0.000 promoter-TSS (NM_014245) promoter-TSS (NM_014245) -3 NR_037702 9616 Hs.134623 NM_014245 ENSG00000114125 RNF7 CKBBP1|ROC2|SAG|rbx2 ring finger protein 7 protein-coding chrX-140 chrX 44542799 44543009 + 27.8 0.000 promoter-TSS (NM_173794) promoter-TSS (NM_173794) -45 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr11-466 chr11 75626282 75626492 + 27.8 0.000 intron (NM_207577, intron 1 of 2) intron (NM_207577, intron 1 of 2) 42047 NM_033063 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr3-765 chr3 89146091 89146301 + 27.8 0.000 intron (NM_182644, intron 2 of 6) Tigger7|DNA|TcMar-Tigger 38575 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr3-395 chr3 38829429 38829639 + 27.8 0.000 Intergenic Intergenic -35524 NM_006514 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr7-205 chr7 67302564 67302774 + 27.7 0.000 promoter-TSS (NR_046299) promoter-TSS (NR_046299) 31 NR_040585 64940 Hs.632013 NM_022906 ENSG00000106610 STAG3L4 STAG3L4P stromal antigen 3-like 4 (pseudogene) pseudo chr10-406 chr10 97401159 97401369 + 27.7 0.000 promoter-TSS (NM_015179) promoter-TSS (NM_015179) 76 NM_015179 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr11-403 chr11 68010143 68010353 + 27.7 0.000 promoter-TSS (NM_000694) promoter-TSS (NM_000694) -79 NM_001290058 221 Hs.523841 NM_000694 ENSG00000006534 ALDH3B1 ALDH4|ALDH7 aldehyde dehydrogenase 3 family member B1 protein-coding chr3-389 chr3 121477746 121477956 + 27.7 0.000 intron (NM_199420, intron 19 of 29) intron (NM_199420, intron 19 of 29) 68137 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chrX-99 chrX 7044042 7044252 + 27.7 0.000 Intergenic Intergenic -103143 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr20-153 chr20 2508976 2509186 + 27.7 0.000 promoter-TSS (NM_024325) promoter-TSS (NM_024325) 51 NM_001282498 79175 Hs.516846 NM_024325 ENSG00000088876 ZNF343 dJ734P14.5 zinc finger protein 343 protein-coding chr16-212 chr16 54930596 54930806 + 27.7 0.000 promoter-TSS (NM_001252197) promoter-TSS (NM_001252197) -164 NM_005853 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr2-613 chr2 188079287 188079497 + 27.7 0.000 intron (NR_126396, intron 2 of 2) Arthur1B|DNA|hAT-Tip100 208299 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr21-68 chr21 43733434 43733644 + 27.7 0.000 intron (NM_003681, intron 1 of 10) (ACCCTC)n|Simple_repeat|Simple_repeat -7947 NM_001331030 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr10-348 chr10 43397277 43397487 + 27.7 0.000 promoter-TSS (NM_001098207) promoter-TSS (NM_001098207) -36 NM_001098207 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr13-290 chr13 52348167 52348377 + 27.7 0.000 Intergenic Intergenic 13977 NR_120400 103191607 NR_120400 ENSG00000271564 LINC02333 - long intergenic non-protein coding RNA 2333 ncRNA chr11-608 chr11 75399512 75399722 + 27.7 0.000 promoter-TSS (NM_001260506) promoter-TSS (NM_001260506) 99 NM_001005 6188 Hs.546286 NM_001005 ENSG00000149273 RPS3 S3 ribosomal protein S3 protein-coding chr4-130 chr4 3041822 3042032 + 27.7 0.000 Intergenic Intergenic 32587 NR_045414 100750326 Hs.575112 NR_045414 HTT-AS HTT-AS1|HTTAS HTT antisense RNA ncRNA chr2-258 chr2 44044238 44044448 + 27.7 0.000 Intergenic Intergenic -48354 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr10-529 chr10 27620990 27621200 + 27.7 0.000 Intergenic Intergenic 116791 NM_021252 22931 Hs.406799 NM_021252 ENSG00000099246 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding chr22-357 chr22 31271661 31271871 + 27.7 0.000 intron (NM_001031801, intron 11 of 14) L3|LINE|CR1 20722 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr14-116 chr14 52695638 52695848 + 27.7 0.000 promoter-TSS (NM_014584) promoter-TSS (NM_014584) -185 NM_014584 30001 Hs.525339 NM_014584 ENSG00000197930 ERO1A ERO1-L|ERO1-L-alpha|ERO1-alpha|ERO1L|ERO1LA|Ero1alpha endoplasmic reticulum oxidoreductase 1 alpha protein-coding chr3-298 chr3 48740063 48740273 + 27.7 0.000 Intergenic Intergenic -22890 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr5-125 chr5 177457660 177457870 + 27.7 0.000 intron (NM_080881, intron 13 of 14) intron (NM_080881, intron 13 of 14) 4661 NM_001364152 1627 Hs.130316 NM_004395 ENSG00000113758 DBN1 D0S117E drebrin 1 protein-coding chr20-131 chr20 35305725 35305935 + 27.7 0.000 intron (NM_001184977, intron 7 of 7) intron (NM_001184977, intron 7 of 7) -13405 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr10-910 chr10 69874579 69874789 + 27.7 0.000 intron (NM_001368897, intron 4 of 33) intron (NM_001368897, intron 4 of 33) 72778 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr7-609 chr7 34260385 34260595 + 27.7 0.000 Intergenic LTR16A1|LTR|ERVL 354951 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr7-408 chr7 44200821 44201031 + 27.7 0.000 promoter-TSS (NM_001363678) promoter-TSS (NM_001363678) -52 NM_006555 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr7-210 chr7 130668535 130668745 + 27.7 0.000 TTS (NM_001304968) TTS (NM_001304968) 108 NM_012133 26958 Hs.6421 NM_012133 ENSG00000158623 COPG2 2-COP|gamma-2-COP coatomer protein complex subunit gamma 2 protein-coding chr16-566 chr16 920443 920653 + 27.7 0.000 promoter-TSS (NR_110945) promoter-TSS (NR_110945) -485 NR_110946 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr17-412 chr17 77465604 77465814 + 27.7 0.000 intron (NM_001293698, intron 1 of 9) intron (NM_001293698, intron 1 of 9) -9534 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr17-726 chr17 27540321 27540531 + 27.7 0.000 intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 68462 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr15-144 chr15 25933905 25934115 + 27.7 0.000 intron (NR_040082, intron 1 of 4) intron (NR_040082, intron 1 of 4) 31650 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr3-360 chr3 184688578 184688788 + 27.7 0.000 Intergenic Intergenic 23381 NM_022149 64110 Hs.306123 NM_022149 ENSG00000177383 MAGEF1 MAGE-F1 MAGE family member F1 protein-coding chr5-150 chr5 88141390 88141600 + 27.7 0.000 Intergenic CpG 127350 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding chr7-473 chr7 101923327 101923537 + 27.7 0.000 intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 105806 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr7-470 chr7 76109118 76109328 + 27.7 0.000 promoter-TSS (NR_135079) promoter-TSS (NR_135079) -461 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr9-318 chr9 116549363 116549573 + 27.7 0.000 intron (NR_033973, intron 8 of 11) intron (NR_033973, intron 8 of 11) 45185 NR_033973 100128505 Hs.675821 NR_033973 ENSG00000229105 ASTN2-AS1 - ASTN2 antisense RNA 1 ncRNA chr9-401 chr9 132901991 132902201 + 27.7 0.000 intron (NM_000368, intron 18 of 22) MER119|DNA|hAT-Charlie 23198 NM_001316897 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr12-234 chr12 132600477 132600687 + 27.7 0.000 Intergenic Intergenic 10000 NM_001195520 100507055 Hs.282811 NM_001195520 ENSG00000204583 LRCOL1 - leucine rich colipase like 1 protein-coding chr11-430 chr11 66370149 66370359 + 27.7 0.000 intron (NM_001532, intron 2 of 11) L2c|LINE|L2 1506 NM_001532 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr11-1199 chr11 122721871 122722081 + 27.7 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 66254 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr6-346 chr6 137415246 137415456 + 27.7 0.000 Intergenic Intergenic 79043 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chrX-92 chrX 12978459 12978669 + 27.7 0.000 Intergenic Intergenic 3454 NM_021109 7114 Hs.437277 NM_021109 ENSG00000205542 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4 X-linked protein-coding chr18-72 chr18 3448137 3448347 + 27.7 0.000 intron (NM_173207, intron 1 of 2) CpG 700 NM_173207 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr1-555 chr1 156894917 156895127 + 27.7 0.000 intron (NM_001080471, intron 1 of 22) intron (NM_001080471, intron 1 of 22) 1291 NM_001080471 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr2-754 chr2 168030943 168031153 + 27.7 0.000 intron (NM_013233, intron 14 of 17) intron (NM_013233, intron 14 of 17) -89904 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chrX-60 chrX 72239023 72239233 + 27.7 0.000 promoter-TSS (NM_017669) promoter-TSS (NM_017669) -101 NM_001009954 54821 Hs.47558 NM_017669 ENSG00000186871 ERCC6L PICH|RAD26L ERCC excision repair 6 like, spindle assembly checkpoint helicase protein-coding chr9-190 chr9 105448032 105448242 + 27.7 0.000 5' UTR (NM_001145313, exon 1 of 14) 5' UTR (NM_001145313, exon 1 of 14) 103 NM_031919 83856 Hs.136901 NM_031919 ENSG00000106701 FSD1L CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1 fibronectin type III and SPRY domain containing 1 like protein-coding chr12-758 chr12 80580355 80580565 + 27.7 0.000 intron (NM_001145026, intron 25 of 44) intron (NM_001145026, intron 25 of 44) -127174 NM_002469 4618 Hs.35937 NM_002469 ENSG00000111046 MYF6 CNM3|MRF4|bHLHc4|myf-6 myogenic factor 6 protein-coding chrX-31 chrX 91434730 91434940 + 27.7 0.000 promoter-TSS (NM_080832) promoter-TSS (NM_080832) -4 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr6-75 chr6 3752001 3752211 + 27.7 0.000 promoter-TSS (NM_183373) promoter-TSS (NM_183373) -94 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr14-310 chr14 68961984 68962194 + 27.7 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 17213 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr15-234 chr15 72686214 72686424 + 27.7 0.000 promoter-TSS (NM_001350932) promoter-TSS (NM_001350932) 112 NM_033028 585 Hs.208681 NM_033028 ENSG00000140463 BBS4 - Bardet-Biedl syndrome 4 protein-coding chr19-531 chr19 12294721 12294931 + 27.7 0.000 promoter-TSS (NM_001164276) promoter-TSS (NM_001164276) 57 NM_016264 51710 Hs.296731 NM_016264 ENSG00000197857 ZNF44 GIOT-2|KOX7|ZNF|ZNF504|ZNF55|ZNF58 zinc finger protein 44 protein-coding chr9-636 chr9 128912519 128912729 + 27.7 0.000 intron (NM_001127245, intron 2 of 2) intron (NM_001127245, intron 2 of 2) -8358 NM_001100876 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr22-339 chr22 30609319 30609529 + 27.7 0.000 intron (NM_000355, intron 1 of 8) intron (NM_000355, intron 1 of 8) 2250 NM_000355 6948 Hs.417948 NM_000355 ENSG00000185339 TCN2 D22S676|D22S750|II|TC|TC II|TC-2|TC2|TCII transcobalamin 2 protein-coding chr3-597 chr3 139535069 139535279 + 27.7 0.000 intron (NM_001130992, intron 2 of 2) intron (NM_001130992, intron 2 of 2) 4462 NM_001365940 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr18-79 chr18 45839621 45839831 + 27.7 0.000 intron (NM_213602, intron 4 of 5) intron (NM_213602, intron 4 of 5) 14051 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr12-343 chr12 27022492 27022702 + 27.7 0.000 promoter-TSS (NM_001271811) promoter-TSS (NM_001271811) 39 NM_004264 9412 Hs.286145 NM_004264 ENSG00000152944 MED21 SRB7|SURB7|hSrb7 mediator complex subunit 21 protein-coding chr19-629 chr19 48644951 48645161 + 27.7 0.000 intron (NR_136241, intron 2 of 8) intron (NR_136241, intron 2 of 8) 1131 NM_001217 770 Hs.428446 NM_001217 ENSG00000063180 CA11 CA-RP|CA-RP II|CA-XI|CARP-2|CARPX1 carbonic anhydrase 11 protein-coding chr1-247 chr1 20786773 20786983 + 27.7 0.000 promoter-TSS (NM_016287) promoter-TSS (NM_016287) -190 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr9-225 chr9 34646771 34646981 + 27.7 0.000 intron (NM_001258332, intron 1 of 8) CpG 201 NM_000155 2592 Hs.522090 NM_000155 ENSG00000213930 GALT - galactose-1-phosphate uridylyltransferase protein-coding chr15-200 chr15 55775427 55775637 + 27.6 0.000 Intergenic L2b|LINE|L2 -32380 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chr1-1190 chr1 39981981 39982191 + 27.6 0.000 Intergenic Intergenic 26941 NM_001349821 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding chr17-155 chr17 41865371 41865581 + 27.6 0.000 promoter-TSS (NM_018143) promoter-TSS (NM_018143) -53 NM_018143 55175 Hs.13268 NM_018143 ENSG00000178502 KLHL11 - kelch like family member 11 protein-coding chr15-427 chr15 70875146 70875356 + 27.6 0.000 intron (NM_001284357, intron 2 of 16) intron (NM_001284357, intron 2 of 16) 17182 NM_020147 56906 Hs.591123 NM_020147 ENSG00000129028 THAP10 - THAP domain containing 10 protein-coding chr3-159 chr3 69739335 69739545 + 27.6 0.000 promoter-TSS (NM_001354604) promoter-TSS (NM_001354604) -24 NM_001354606 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr20-187 chr20 3174166 3174376 + 27.6 0.000 promoter-TSS (NM_001282533) promoter-TSS (NM_001282533) -722 NM_001282533 9762 Hs.90232 NM_014731 ENSG00000088899 LZTS3 PROSAPIP1 leucine zipper tumor suppressor family member 3 protein-coding chr15-156 chr15 65792295 65792505 + 27.6 0.000 promoter-TSS (NM_001144823) promoter-TSS (NM_001144823) -107 NM_001320835 10260 Hs.654567 NM_005848 ENSG00000174485 DENND4A IRLB|MYCPBP DENN domain containing 4A protein-coding chr4-362 chr4 140267735 140267945 + 27.6 0.000 intron (NM_032547, intron 1 of 4) LTR33A_|LTR|ERVL 10532 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chrX-161 chrX 136725572 136725782 + 27.6 0.000 intron (NM_001306177, intron 5 of 20) intron (NM_001306177, intron 5 of 20) 42138 NM_001306177 9459 Hs.522795 NM_004840 ENSG00000129675 ARHGEF6 COOL2|Cool-2|MRX46|PIXA|alpha-PIX|alphaPIX Rac/Cdc42 guanine nucleotide exchange factor 6 protein-coding chr17-1131 chr17 59837736 59837946 + 27.6 0.000 intron (NM_001329395, intron 11 of 12) intron (NM_001329395, intron 11 of 12) -3425 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr13-82 chr13 32829781 32829991 + 27.6 0.000 intron (NR_047020, intron 4 of 4) intron (NR_047020, intron 4 of 4) 81766 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr2-906 chr2 171878608 171878818 + 27.6 0.000 intron (NR_047549, intron 2 of 16) intron (NR_047549, intron 2 of 16) 15531 NM_003705 8604 Hs.470608 NM_003705 ENSG00000115840 SLC25A12 AGC1|ARALAR|EIEE39 solute carrier family 25 member 12 protein-coding chr12-444 chr12 97556508 97556718 + 27.6 0.000 intron (NR_152618, intron 8 of 10) intron (NR_152618, intron 8 of 10) -7199 NR_029678 406926 NR_029678 ENSG00000207586 MIR135A2 MIRN135-2|MIRN135A2|mir-135a-2 microRNA 135a-2 ncRNA chr12-400 chr12 6540647 6540857 + 27.6 0.000 intron (NM_001330324, intron 8 of 8) intron (NM_001330324, intron 8 of 8) 5488 NM_001256799 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding chr3-495 chr3 58404472 58404682 + 27.6 0.000 intron (NM_017771, intron 13 of 17) MIRb|SINE|MIR 29255 NM_000925 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr16-224 chr16 11915953 11916163 + 27.6 0.000 promoter-TSS (NM_001130006) promoter-TSS (NM_001130006) -102 NM_001130006 2935 Hs.528780 NM_002094 ENSG00000103342 GSPT1 551G9.2|ETF3A|GST1|eRF3a G1 to S phase transition 1 protein-coding chr2-789 chr2 190867326 190867536 + 27.6 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -13390 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr1-666 chr1 201696455 201696665 + 27.6 0.000 intron (NR_046696, intron 2 of 2) intron (NR_046696, intron 2 of 2) -22948 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chr3-397 chr3 49429414 49429624 + 27.6 0.000 promoter-TSS (NM_032316) promoter-TSS (NM_032316) -195 NM_032316 84276 Hs.191460 NM_032316 ENSG00000145029 NICN1 - nicolin 1 protein-coding chr4-375 chr4 87391079 87391289 + 27.6 0.000 promoter-TSS (NM_016245) promoter-TSS (NM_016245) 4 NM_016245 51170 Hs.594923 NM_016245 ENSG00000198189 HSD17B11 17-BETA-HSD11|17-BETA-HSDXI|17BHSD11|DHRS8|PAN1B|RETSDR2|SDR16C2 hydroxysteroid 17-beta dehydrogenase 11 protein-coding chr13-148 chr13 45522746 45522956 + 27.6 0.000 intron (NM_031431, intron 19 of 22) intron (NM_031431, intron 19 of 22) 57912 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chr6-252 chr6 35663915 35664125 + 27.6 0.000 TTS (NR_049873) TTS (NR_049873) 769 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr10-59 chr10 132331915 132332125 + 27.6 0.000 promoter-TSS (NM_001143759) promoter-TSS (NM_001143759) -140 NM_001318881 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr1-1231 chr1 53107654 53107864 + 27.6 0.000 TTS (NM_001287596) TTS (NM_001287596) 34879 NM_006671 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr17-266 chr17 68101546 68101756 + 27.6 0.000 promoter-TSS (NR_027418) promoter-TSS (NR_027418) 96 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr10-554 chr10 91512013 91512223 + 27.6 0.000 intron (NM_182765, intron 20 of 20) L2a|LINE|L2 99342 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr6-194 chr6 52664306 52664516 + 27.6 0.000 promoter-TSS (NR_024403) promoter-TSS (NR_024403) 10 NR_024405 730101 Hs.7921 NR_024403 ENSG00000216775 LOC730101 - uncharacterized LOC730101 ncRNA chr12-394 chr12 113422185 113422395 + 27.6 0.000 promoter-TSS (NM_001304993) promoter-TSS (NM_001304993) -90 NM_001304993 113675 Hs.337594 NM_138432 ENSG00000139410 SDSL SDH 2|SDS-RS1|TDH|cSDH serine dehydratase like protein-coding chr5-1265 chr5 96336402 96336612 + 27.6 0.000 intron (NR_130776, intron 3 of 4) intron (NR_130776, intron 3 of 4) 95652 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr4-415 chr4 101232172 101232382 + 27.6 0.000 intron (NM_001130691, intron 1 of 12) MamSINE1|SINE|tRNA-RTE 8595 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr17-376 chr17 75633111 75633321 + 27.6 0.000 promoter-TSS (NM_001162995) promoter-TSS (NM_001162995) -218 NM_001162995 643008 Hs.528605 NM_001162995 ENSG00000204323 SMIM5 C17orf109|PP12104 small integral membrane protein 5 protein-coding chr8-87 chr8 123041809 123042019 + 27.6 0.000 intron (NM_024295, intron 1 of 7) CpG 388 NM_024295 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr17-903 chr17 65888653 65888863 + 27.6 0.000 intron (NM_001353129, intron 20 of 26) intron (NM_001353129, intron 20 of 26) -62215 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr13-241 chr13 76711597 76711807 + 27.6 0.000 Intergenic Intergenic 174703 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr3-475 chr3 187783158 187783368 + 27.6 0.000 Intergenic MIRc|SINE|MIR -37795 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr5-302 chr5 178730649 178730859 + 27.6 0.000 promoter-TSS (NM_001324339) promoter-TSS (NM_001324339) -95 NM_005649 6940 Hs.484324 NM_005649 ENSG00000169131 ZNF354A EZNF|HEL104|HKL1|KID-1|KID1|TCF17 zinc finger protein 354A protein-coding chr1-634 chr1 108876933 108877143 + 27.6 0.000 promoter-TSS (NM_001321038) promoter-TSS (NM_001321038) 53 NM_001321038 29899 Hs.584901 NM_013296 ENSG00000121957 GPSM2 CMCS|DFNB82|LGN|PINS G protein signaling modulator 2 protein-coding chr17-633 chr17 78497262 78497472 + 27.6 0.000 intron (NR_102401, intron 5 of 5) intron (NR_102401, intron 5 of 5) 12457 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr7-596 chr7 75951548 75951758 + 27.6 0.000 intron (NM_001367562, intron 2 of 16) intron (NM_001367562, intron 2 of 16) 7870 NR_002955 677801 Hs.689708 NR_002955 ENSG00000201643 SNORA14A ACA14a small nucleolar RNA, H/ACA box 14A snoRNA chr16-239 chr16 547081 547291 + 27.6 0.000 exon (NM_005632, exon 4 of 14) exon (NM_005632, exon 4 of 14) 3909 NR_036137 100423037 NR_036137 ENSG00000266235 MIR3176 mir-3176 microRNA 3176 ncRNA chr2-799 chr2 235676178 235676388 + 27.6 0.000 intron (NM_001037131, intron 1 of 17) L2c|LINE|L2 -158362 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr1-754 chr1 27418472 27418682 + 27.6 0.000 intron (NM_006990, intron 3 of 8) intron (NM_006990, intron 3 of 8) 25955 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chr14-241 chr14 103540763 103540973 + 27.6 0.000 Intergenic Intergenic 11672 NM_152307 115708 Hs.525610 NM_152307 ENSG00000166166 TRMT61A C14orf172|GCD14|Gcd14p|TRM61|hTRM61 tRNA methyltransferase 61A protein-coding chr12-310 chr12 120230705 120230915 + 27.6 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 19353 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr11-398 chr11 3169753 3169963 + 27.6 0.000 Intergenic Intergenic -4548 NM_145638 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr10-460 chr10 79177064 79177274 + 27.6 0.000 intron (NM_020338, intron 4 of 24) intron (NM_020338, intron 4 of 24) 108203 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr2-319 chr2 241561863 241562073 + 27.6 0.000 intron (NM_032515, intron 2 of 4) intron (NM_032515, intron 2 of 4) -2825 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr2-432 chr2 26298897 26299107 + 27.6 0.000 Intergenic HERV15-int|LTR|ERV1 20047 NM_001145168 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr1-691 chr1 25895456 25895666 + 27.6 0.000 intron (NM_001145454, intron 4 of 4) MER102b|DNA|hAT-Charlie 10592 NM_203401 3925 Hs.209983 NM_005563 ENSG00000117632 STMN1 C1orf215|LAP18|Lag|OP18|PP17|PP19|PR22|SMN stathmin 1 protein-coding chr20-106 chr20 49812802 49813012 + 27.6 0.000 promoter-TSS (NR_048540) promoter-TSS (NR_048540) 79 NR_048538 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr2-854 chr2 38038503 38038713 + 27.6 0.000 intron (NM_144713, intron 10 of 10) intron (NM_144713, intron 10 of 10) -2267 NR_102712 101410544 Hs.591566 NR_102712 RMDN2-AS1 - RMDN2 antisense RNA 1 ncRNA chr9-662 chr9 16203455 16203665 + 27.6 0.000 TTS (NM_001271829) TTS (NM_001271829) 49547 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr1-428 chr1 52703138 52703348 + 27.6 0.000 Intergenic Intergenic -4896 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chr7-512 chr7 75732868 75733078 + 27.6 0.000 intron (NM_005338, intron 1 of 30) L2c|LINE|L2 5968 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr19-656 chr19 58466976 58467186 + 27.6 0.000 promoter-TSS (NM_014347) promoter-TSS (NM_014347) 1 NM_014347 25799 Hs.515660 NM_014347 ENSG00000083812 ZNF324 ZF5128|ZNF324A zinc finger protein 324 protein-coding chr2-604 chr2 65024561 65024771 + 27.6 0.000 TTS (NM_001348407) TTS (NM_001348407) -31750 NR_134966 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr1-802 chr1 244322943 244323153 + 27.6 0.000 Intergenic Intergenic -29587 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr16-332 chr16 67846534 67846744 + 27.6 0.000 promoter-TSS (NM_005796) promoter-TSS (NM_005796) -294 NM_005796 10204 Hs.356630 NM_005796 ENSG00000102898 NUTF2 NTF-2|NTF2|PP15 nuclear transport factor 2 protein-coding chr16-272 chr16 1826919 1827129 + 27.6 0.000 promoter-TSS (NM_031208) promoter-TSS (NM_031208) 170 NM_001363912 3029 Hs.157394 NM_005326 ENSG00000063854 HAGH GLO2|GLX2|GLXII|HAGH1 hydroxyacylglutathione hydrolase protein-coding chr2-345 chr2 99141160 99141370 + 27.6 0.000 promoter-TSS (NM_144706) promoter-TSS (NM_144706) -85 NR_146001 80705 Hs.120267 NM_025244 ENSG00000135951 TSGA10 CEP4L|CT79|SPGF26 testis specific 10 protein-coding chr1-914 chr1 31007422 31007632 + 27.6 0.000 intron (NM_001020658, intron 3 of 21) intron (NM_001020658, intron 3 of 21) -39290 NR_003066 692200 NR_003066 SNORD103C HBII-251|SNORD85 small nucleolar RNA, C/D box 103C snoRNA chr10-543 chr10 127424702 127424912 + 27.6 0.000 intron (NM_001290223, intron 46 of 51) intron (NM_001290223, intron 46 of 51) -124542 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr5-276 chr5 172187201 172187411 + 27.6 0.000 intron (NM_005990, intron 1 of 18) intron (NM_005990, intron 1 of 18) 918 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr6-277 chr6 158003448 158003658 + 27.5 0.000 intron (NM_003898, intron 1 of 26) intron (NM_003898, intron 1 of 26) 2446 NR_046796 100874300 Hs.742238 NR_046796 ENSG00000233496 SYNJ2-IT1 - SYNJ2 intronic transcript 1 ncRNA chr3-625 chr3 191412880 191413090 + 27.5 0.000 Intergenic MER70A|LTR|ERVL -12539 NR_120606 103344926 NR_120606 LINCR-0002 - uncharacterized LincR-0002 ncRNA chr21-63 chr21 37339051 37339261 + 27.5 0.000 Intergenic Intergenic -26417 NM_001396 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr17-331 chr17 2049832 2050042 + 27.5 0.000 promoter-TSS (NR_029674) promoter-TSS (NR_029674) 71 NR_029674 406921 NR_029674 ENSG00000267200 MIR132 MIRN132|miRNA132|mir-132 microRNA 132 ncRNA chr9-264 chr9 125189884 125190094 + 27.5 0.000 promoter-TSS (NM_001123369) promoter-TSS (NM_001123369) -50 NM_001123355 5537 Hs.744091 NM_002721 ENSG00000119414 PPP6C PP6|PP6C protein phosphatase 6 catalytic subunit protein-coding chr20-183 chr20 36236446 36236656 + 27.5 0.000 promoter-TSS (NM_001271874) promoter-TSS (NM_001271874) 73 NM_001271874 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr11-918 chr11 123054506 123054716 + 27.5 0.000 Intergenic Intergenic 3545 NR_003125 85391 NR_003125 ENSG00000200879 SNORD14E - small nucleolar RNA, C/D box 14E snoRNA chr11-255 chr11 64342492 64342702 + 27.5 0.000 promoter-TSS (NR_106977) promoter-TSS (NR_106977) -693 NR_106977 102466815 NR_106977 ENSG00000278359 MIR7155 hsa-mir-7155 microRNA 7155 ncRNA chr12-558 chr12 45969225 45969435 + 27.5 0.000 intron (NM_004719, intron 1 of 14) intron (NM_004719, intron 1 of 14) 21244 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr2-708 chr2 79717534 79717744 + 27.5 0.000 intron (NM_001282598, intron 2 of 17) intron (NM_001282598, intron 2 of 17) -68280 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA chr1-399 chr1 227794226 227794436 + 27.5 0.000 Intergenic Intergenic -21386 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr9-468 chr9 71748368 71748578 + 27.5 0.000 intron (NM_013390, intron 2 of 23) intron (NM_013390, intron 2 of 23) 20040 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr16-388 chr16 67841995 67842205 + 27.5 0.000 promoter-TSS (NM_020457) promoter-TSS (NM_020457) -220 NM_020457 57215 Hs.632200 NM_020457 ENSG00000168286 THAP11 CTG-B43a|CTG-B45d|HRIHFB2206|RONIN THAP domain containing 11 protein-coding chr17-749 chr17 50639175 50639385 + 27.5 0.000 intron (NM_003786, intron 1 of 30) intron (NM_003786, intron 1 of 30) 4399 NM_001144070 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr3-808 chr3 29233211 29233421 + 27.5 0.000 Intergenic L2a|LINE|L2 47623 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr2-988 chr2 148096092 148096302 + 27.5 0.000 intron (NM_018328, intron 2 of 14) intron (NM_018328, intron 2 of 14) -74593 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr1-385 chr1 32651083 32651293 + 27.5 0.000 promoter-TSS (NM_001366264) promoter-TSS (NM_001366264) -20 NM_005610 5928 Hs.16003 NM_005610 ENSG00000162521 RBBP4 NURF55|RBAP48|lin-53 RB binding protein 4, chromatin remodeling factor protein-coding chr11-1439 chr11 67033818 67034028 + 27.5 0.000 intron (NM_001318773, intron 3 of 8) intron (NM_001318773, intron 3 of 8) 10789 NM_177963 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr4-479 chr4 16686243 16686453 + 27.5 0.000 intron (NM_001304435, intron 2 of 7) MIRb|SINE|MIR 212297 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chrX-146 chrX 119503449 119503659 + 27.5 0.000 Intergenic Intergenic -34434 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr8-413 chr8 103344835 103345045 + 27.5 0.000 Intergenic Intergenic -26598 NM_138455 115908 Hs.405614 NM_138455 ENSG00000164932 CTHRC1 - collagen triple helix repeat containing 1 protein-coding chr2-238 chr2 45010139 45010349 + 27.5 0.000 promoter-TSS (NM_016932) promoter-TSS (NM_016932) -792 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr7-329 chr7 47757971 47758181 + 27.5 0.000 Intergenic Intergenic -3400 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr3-623 chr3 184636854 184637064 + 27.5 0.000 Intergenic Intergenic 75105 NM_022149 64110 Hs.306123 NM_022149 ENSG00000177383 MAGEF1 MAGE-F1 MAGE family member F1 protein-coding chr10-475 chr10 76080489 76080699 + 27.5 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 297833 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr6-234 chr6 10316452 10316662 + 27.5 0.000 Intergenic Intergenic -87945 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr11-267 chr11 68121373 68121583 + 27.5 0.000 promoter-TSS (NM_212469) promoter-TSS (NM_212469) -87 NM_212469 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr8-149 chr8 73294283 73294493 + 27.5 0.000 promoter-TSS (NM_001363737) promoter-TSS (NM_001363737) 78 NM_001363737 6129 Hs.421257 NM_000971 ENSG00000147604 RPL7 L7|humL7-1 ribosomal protein L7 protein-coding chr1-768 chr1 147172674 147172884 + 27.5 0.000 promoter-TSS (NM_005399) promoter-TSS (NM_005399) 32 NM_001348451 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr11-538 chr11 120710537 120710747 + 27.5 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 108473 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr19-738 chr19 12495281 12495491 + 27.5 0.000 Intergenic CpG -10570 NM_152601 163051 Hs.631623 NM_152601 ENSG00000242852 ZNF709 - zinc finger protein 709 protein-coding chr9-453 chr9 86557164 86557374 + 27.5 0.000 Intergenic Intergenic -202859 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr14-145 chr14 96104795 96105005 + 27.5 0.000 Intergenic Intergenic 65538 NM_001282463 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr11-329 chr11 85855000 85855210 + 27.5 0.000 promoter-TSS (NM_173556) promoter-TSS (NM_173556) 4 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr1-565 chr1 32351558 32351768 + 27.5 0.000 Intergenic CpG 10580 NM_001167676 100128071 Hs.512763 NM_001167676 ENSG00000225828 FAM229A - family with sequence similarity 229 member A protein-coding chr10-574 chr10 103781518 103781728 + 27.5 0.000 intron (NM_014631, intron 2 of 13) intron (NM_014631, intron 2 of 13) 34844 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr16-229 chr16 28863546 28863756 + 27.5 0.000 promoter-TSS (NM_001308294) promoter-TSS (NM_001308294) -106 NM_001145796 25970 Hs.15744 NM_015503 ENSG00000178188 SH2B1 PSM|SH2B SH2B adaptor protein 1 protein-coding chr8-252 chr8 30722860 30723070 + 27.5 0.000 intron (NM_000637, intron 1 of 12) intron (NM_000637, intron 1 of 12) 4881 NM_000637 2936 Hs.271510 NM_000637 ENSG00000104687 GSR GR|HEL-75|HEL-S-122m glutathione-disulfide reductase protein-coding chr5-420 chr5 167730169 167730379 + 27.5 0.000 intron (NM_001368145, intron 1 of 26) intron (NM_001368145, intron 1 of 26) -24655 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr12-329 chr12 50620703 50620913 + 27.5 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 115823 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr18-193 chr18 23053909 23054119 + 27.5 0.000 Intergenic LTR50|LTR|ERVL -80550 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr1-450 chr1 202235904 202236114 + 27.5 0.000 intron (NM_001017404, intron 4 of 15) intron (NM_001017404, intron 4 of 15) 21854 NM_001017404 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr1-1151 chr1 24046483 24046693 + 27.5 0.000 Intergenic Intergenic 65547 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr17-369 chr17 76252278 76252488 + 27.5 0.000 Intergenic Intergenic -11890 NM_001330501 114804 Hs.500643 NM_052916 ENSG00000141576 RNF157 - ring finger protein 157 protein-coding chr5-541 chr5 141713625 141713835 + 27.5 0.000 Intergenic Intergenic -31500 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr11-582 chr11 12539686 12539896 + 27.5 0.000 Intergenic Intergenic -134630 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11-835 chr11 73838443 73838653 + 27.5 0.000 intron (NM_001318500, intron 4 of 5) MamRTE1|LINE|RTE-BovB -38151 NM_001267806 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr10-333 chr10 29471563 29471773 + 27.5 0.000 intron (NM_001323599, intron 31 of 38) intron (NM_001323599, intron 31 of 38) 61425 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr7-625 chr7 17276304 17276514 + 27.5 0.000 Intergenic L2c|LINE|L2 -22243 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr10-228 chr10 491086 491296 + 27.5 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -137373 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr22-261 chr22 33853771 33853981 + 27.5 0.000 intron (NM_001362953, intron 1 of 14) intron (NM_001362953, intron 1 of 14) 66552 NM_004737 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr11-388 chr11 65471992 65472202 + 27.5 0.000 Intergenic Intergenic 16811 NR_160549 101927789 NR_160547 LOC101927789 - FAU, ubiquitin like and ribosomal protein S30 fusion pseudogene pseudo chr3-1222 chr3 89114522 89114732 + 27.5 0.000 intron (NM_182644, intron 1 of 6) CpG 7006 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr11-607 chr11 73257389 73257599 + 27.5 0.000 Intergenic Intergenic -7011 NM_176797 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr17-519 chr17 44222303 44222513 + 27.5 0.000 Intergenic Intergenic -1104 NR_045058 7343 Hs.89781 NM_014233 ENSG00000108312 UBTF CONDBA|NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor protein-coding chr13-163 chr13 29702964 29703174 + 27.5 0.000 Intergenic Intergenic 55376 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chr8-89 chr8 93917612 93917822 + 27.5 0.000 intron (NM_001161781, intron 1 of 1) intron (NM_001161781, intron 1 of 1) 770 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr7-292 chr7 30026685 30026895 + 27.5 0.000 promoter-TSS (NM_017946) promoter-TSS (NM_017946) 11 NM_017946 55033 Hs.390838 NM_017946 ENSG00000106080 FKBP14 EDSKMH|EDSKSCL2|FKBP22|IPBP12 FKBP prolyl isomerase 14 protein-coding chr7-192 chr7 148884340 148884550 + 27.5 0.000 promoter-TSS (NM_001203248) promoter-TSS (NM_001203248) -96 NM_004456 2146 Hs.444082 NM_004456 ENSG00000106462 EZH2 ENX-1|ENX1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding chr9-759 chr9 95025894 95026104 + 27.3 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -39351 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr18-127 chr18 47215682 47215892 + 27.3 0.000 intron (NM_001278063, intron 7 of 8) intron (NM_001278063, intron 7 of 8) 35873 NM_001278063 652991 Hs.585834 NM_001037802 ENSG00000215474 SKOR2 CH18515|CORL2|FUSSEL18 SKI family transcriptional corepressor 2 protein-coding chr17-1232 chr17 68759843 68760053 + 27.3 0.000 Intergenic Intergenic 131794 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr13-115 chr13 113887676 113887886 + 27.3 0.000 Intergenic L1MC2|LINE|L1 -4295 NR_047035 100874178 Hs.547957 NR_047035 ENSG00000226921 LINC00454 - long intergenic non-protein coding RNA 454 ncRNA chr7-700 chr7 128596654 128596864 + 27.3 0.000 Intergenic L2a|LINE|L2 -44482 NR_024368 402483 Hs.722350 NM_001039682 LINC01000 - long intergenic non-protein coding RNA 1000 ncRNA chr12-387 chr12 49130760 49130970 + 27.3 0.000 intron (NM_006082, intron 1 of 3) CpG 530 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr1-1161 chr1 54850879 54851089 + 27.3 0.000 3' UTR (NM_014762, exon 9 of 9) 3' UTR (NM_014762, exon 9 of 9) 36211 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr20-248 chr20 4633963 4634173 + 27.3 0.000 Intergenic LTR26|LTR|ERV1 -52388 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr14-308 chr14 64806621 64806831 + 27.3 0.000 intron (NM_001024858, intron 1 of 34) L2b|LINE|L2 16654 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr1-238 chr1 155688613 155688823 + 27.3 0.000 promoter-TSS (NM_001198903) promoter-TSS (NM_001198903) 6 NM_001198902 55249 Hs.584927 NM_018253 ENSG00000163374 YY1AP1 GRNG|HCCA1|HCCA2|YY1AP YY1 associated protein 1 protein-coding chr19-388 chr19 7903653 7903863 + 27.3 0.000 promoter-TSS (NM_001297556) promoter-TSS (NM_001297556) -119 NM_145185 5609 Hs.531754 NM_145185 ENSG00000076984 MAP2K7 JNKK2|MAPKK7|MEK|MEK 7|MKK7|PRKMK7|SAPKK-4|SAPKK4 mitogen-activated protein kinase kinase 7 protein-coding chr15-415 chr15 82832710 82832920 + 27.3 0.000 intron (NM_001080435, intron 9 of 9) intron (NM_001080435, intron 9 of 9) 23187 NM_001080435 123720 Hs.377360 NM_001080435 ENSG00000156232 WHAMM WHAMM1|WHDC1 WASP homolog associated with actin, golgi membranes and microtubules protein-coding chr4-270 chr4 6991885 6992095 + 27.3 0.000 intron (NM_001286805, intron 1 of 11) intron (NM_001286805, intron 1 of 11) 4482 NM_001286805 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr1-625 chr1 7117690 7117900 + 27.3 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 271959 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr2-601 chr2 54482933 54483143 + 27.3 0.000 intron (NM_003128, intron 1 of 35) intron (NM_003128, intron 1 of 35) 26711 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr1-313 chr1 8343636 8343846 + 27.3 0.000 intron (NM_001080397, intron 8 of 8) CpG 25656 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr16-497 chr16 89508859 89509069 + 27.3 0.000 intron (NM_001363850, intron 1 of 17) intron (NM_001363850, intron 1 of 17) 561 NM_199367 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7 matrix AAA peptidase subunit, paraplegin protein-coding chr10-573 chr10 102856147 102856357 + 27.3 0.000 intron (NM_001136200, intron 1 of 4) Tigger13a|DNA|TcMar-Tigger 1993 NM_144591 119032 Hs.34492 NM_144591 ENSG00000166275 BORCS7 C10orf32 BLOC-1 related complex subunit 7 protein-coding chr3-593 chr3 106826129 106826339 + 27.3 0.000 Intergenic MER67B|LTR|ERV1 414404 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr2-299 chr2 101308556 101308766 + 27.3 0.000 promoter-TSS (NM_173647) promoter-TSS (NM_173647) 40 NM_173647 284996 Hs.142074 NM_173647 ENSG00000163162 RNF149 DNAPTP2 ring finger protein 149 protein-coding chr17-779 chr17 69967973 69968183 + 27.3 0.000 intron (NR_110875, intron 2 of 4) intron (NR_110875, intron 2 of 4) 6371 NR_110875 102723487 Hs.451409 NR_110874 ENSG00000237560 LINC01497 - long intergenic non-protein coding RNA 1497 ncRNA chr10-820 chr10 94183627 94183837 + 27.3 0.000 intron (NM_001165979, intron 3 of 31) MSTB|LTR|ERVL-MaLR -74938 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr15-102 chr15 34338005 34338215 + 27.3 0.000 promoter-TSS (NM_001042495) promoter-TSS (NM_001042495) -53 NM_001042495 9990 Hs.510939 NM_005135 ENSG00000140199 SLC12A6 ACCPN|KCC3|KCC3A|KCC3B solute carrier family 12 member 6 protein-coding chr9-805 chr9 92506228 92506438 + 27.3 0.000 intron (NM_001197296, intron 6 of 9) intron (NM_001197296, intron 6 of 9) 21725 NR_039817 100616351 NR_039817 ENSG00000264158 MIR4670 - microRNA 4670 ncRNA chr5-449 chr5 34924023 34924233 + 27.3 0.000 intron (NM_018321, intron 8 of 9) intron (NM_018321, intron 8 of 9) -5431 NM_001012339 134218 Hs.131887 NM_194283 ENSG00000168724 DNAJC21 BMFS3|DNAJA5|GS3|JJJ1 DnaJ heat shock protein family (Hsp40) member C21 protein-coding chr7-448 chr7 25025262 25025472 + 27.3 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -45189 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr2-916 chr2 212387280 212387490 + 27.3 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 38975 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr16-422 chr16 66525908 66526118 + 27.3 0.000 intron (NR_073520, intron 5 of 8) intron (NR_073520, intron 5 of 8) 24109 NR_073520 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2 protein-coding chr3-331 chr3 195270954 195271164 + 27.3 0.000 promoter-TSS (NM_152531) promoter-TSS (NM_152531) 100 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr10-274 chr10 132397850 132398060 + 27.3 0.000 intron (NM_001098637, intron 1 of 2) G-rich|Low_complexity|Low_complexity 755 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr18-197 chr18 76686930 76687140 + 27.3 0.000 Intergenic Intergenic -2994 NR_122073 400661 Hs.514963 NR_122073 ENSG00000276397 LINC01879 - long intergenic non-protein coding RNA 1879 ncRNA chr2-498 chr2 100291149 100291359 + 27.3 0.000 intron (NM_198461, intron 9 of 11) L1MCc|LINE|L1 31479 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr1-1380 chr1 91383433 91383643 + 27.3 0.000 intron (NM_001017975, intron 6 of 38) intron (NM_001017975, intron 6 of 38) 21299 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr8-885 chr8 32227067 32227277 + 27.3 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) 200954 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr15-334 chr15 38454149 38454359 + 27.3 0.000 intron (NM_173611, intron 1 of 7) CpG 127 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr14-548 chr14 75751481 75751691 + 27.3 0.000 intron (NM_015072, intron 17 of 31) Tigger7|DNA|TcMar-Tigger 90340 NM_015072 23093 Hs.709609 NM_015072 ENSG00000119685 TTLL5 CORD19|KIAA0998|STAMP tubulin tyrosine ligase like 5 protein-coding chr19-641 chr19 34501545 34501755 + 27.3 0.000 3' UTR (NM_001080436, exon 8 of 8) 3' UTR (NM_001080436, exon 8 of 8) 19892 NM_001080436 126374 Hs.585010 NM_001080436 ENSG00000142279 WTIP - WT1 interacting protein protein-coding chrX-50 chrX 69672463 69672673 + 27.3 0.000 intron (NM_001005613, intron 2 of 2) 5S|rRNA|rRNA 56455 NM_001005612 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr18-196 chr18 73848910 73849120 + 27.3 0.000 Intergenic Intergenic 298819 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr2-480 chr2 74178860 74179070 + 27.3 0.000 promoter-TSS (NM_001317110) promoter-TSS (NM_001317110) -86 NM_001317110 55233 Hs.602092 NM_018221 ENSG00000114978 MOB1A C2orf6|MATS1|MOB1|MOBK1B|MOBKL1B|Mob4B MOB kinase activator 1A protein-coding chr11-421 chr11 76445684 76445894 + 27.3 0.000 intron (NM_001300942, intron 1 of 21) intron (NM_001300942, intron 1 of 21) 764 NM_020193 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding chr12-71 chr12 121750624 121750834 + 27.3 0.000 intron (NM_001080825, intron 4 of 11) (CCCACAC)n|Simple_repeat|Simple_repeat 37977 NM_001080825 144404 Hs.644504 NM_001080825 ENSG00000188735 TMEM120B - transmembrane protein 120B protein-coding chr14-186 chr14 75277153 75277363 + 27.3 0.000 Intergenic CpG -1570 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr12-749 chr12 29320362 29320572 + 27.3 0.000 intron (NM_001271783, intron 9 of 11) intron (NM_001271783, intron 9 of 11) -2619 NR_103860 100506606 Hs.298851 NR_103860 ENSG00000257176 LOC100506606 - uncharacterized LOC100506606 ncRNA chr20-430 chr20 35866948 35867158 + 27.3 0.000 intron (NM_016436, intron 6 of 17) MER5A|DNA|hAT-Charlie 87573 NM_033630 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding chr5-408 chr5 43064844 43065054 + 27.3 0.000 TTS (NR_034127) TTS (NR_034127) 2022 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA chr1-681 chr1 156571273 156571483 + 27.3 0.000 intron (NM_178229, intron 1 of 37) intron (NM_178229, intron 1 of 37) 1187 NM_178229 128239 Hs.591495 NM_178229 ENSG00000183856 IQGAP3 - IQ motif containing GTPase activating protein 3 protein-coding chr2-1087 chr2 216195710 216195920 + 27.3 0.000 intron (NM_021141, intron 19 of 20) Charlie13b|DNA|hAT-Charlie -21074 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA chr19-667 chr19 43901621 43901831 + 27.3 0.000 promoter-TSS (NR_038334) promoter-TSS (NR_038334) 77 NR_038334 100505715 Hs.76561 NR_038334 ENSG00000267058 LOC100505715 - uncharacterized LOC100505715 ncRNA chr2-166 chr2 27071629 27071839 + 27.3 0.000 promoter-TSS (NM_001134693) promoter-TSS (NM_001134693) -80 NM_001134693 100128731 Hs.502948 NM_001134693 ENSG00000228474 OST4 - oligosaccharyltransferase complex subunit 4, non-catalytic protein-coding chr7-489 chr7 1571330 1571540 + 27.3 0.000 intron (NR_021487, intron 1 of 5) MER51B|LTR|ERV1 1362 NR_027328 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr9-605 chr9 127937161 127937371 + 27.3 0.000 intron (NM_003863, intron 2 of 3) MIR|SINE|MIR 1218 NM_003863 8818 Hs.108973 NM_003863 ENSG00000136908 DPM2 CDG1U dolichyl-phosphate mannosyltransferase subunit 2, regulatory protein-coding chr3-435 chr3 185253898 185254108 + 27.3 0.000 promoter-TSS (NR_106712) promoter-TSS (NR_106712) 46 NM_001166415 1962 Hs.429879 NM_001966 ENSG00000113790 EHHADH ECHD|FRTS3|L-PBE|LBFP|LBP|PBFE enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase protein-coding chr1-424 chr1 222617628 222617838 + 27.3 0.000 promoter-TSS (NM_001324062) promoter-TSS (NM_001324062) -364 NM_198551 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 MIA SH3 domain ER export factor 3 protein-coding chr7-907 chr7 106848910 106849120 + 27.3 0.000 Intergenic Intergenic -16267 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr22-325 chr22 37675142 37675352 + 27.3 0.000 promoter-TSS (NM_002305) promoter-TSS (NM_002305) -389 NM_002305 3956 Hs.445351 NM_002305 ENSG00000100097 LGALS1 GAL1|GBP galectin 1 protein-coding chr19-688 chr19 11085490 11085700 + 27.3 0.000 Intergenic Intergenic -3767 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr3-494 chr3 12664112 12664322 + 27.3 0.000 promoter-TSS (NR_148941) promoter-TSS (NR_148941) -16 NM_002880 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr21-118 chr21 32256950 32257160 + 27.3 0.000 Intergenic Intergenic 21994 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr7-195 chr7 35694968 35695178 + 27.3 0.000 promoter-TSS (NM_022373) promoter-TSS (NM_022373) 62 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding chr7-483 chr7 75712265 75712475 + 27.3 0.000 intron (NM_005338, intron 1 of 30) intron (NM_005338, intron 1 of 30) 26571 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr6-304 chr6 85361424 85361634 + 27.3 0.000 Intergenic Intergenic 28657 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr2-455 chr2 121755427 121755637 + 27.3 0.000 promoter-TSS (NR_048556) promoter-TSS (NR_048556) -13 NR_048557 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr4-230 chr4 176753083 176753293 + 27.3 0.000 intron (NM_005429, intron 1 of 6) intron (NM_005429, intron 1 of 6) 39734 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr17-292 chr17 79074852 79075062 + 27.2 0.000 promoter-TSS (NM_001042573) promoter-TSS (NM_001042573) 20 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr7-272 chr7 2400065 2400275 + 27.2 0.000 Intergenic Intergenic -3441 NM_001243794 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr4-79 chr4 152779730 152779940 + 27.2 0.000 promoter-TSS (NM_001025593) promoter-TSS (NM_001025593) -102 NM_001025593 27236 Hs.416089 NM_014447 ENSG00000164144 ARFIP1 HSU52521 ADP ribosylation factor interacting protein 1 protein-coding chr1-882 chr1 19682324 19682534 + 27.2 0.000 3' UTR (NM_001349113, exon 16 of 16) 3' UTR (NM_001349113, exon 16 of 16) 17554 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr21-95 chr21 38773391 38773601 + 27.2 0.000 promoter-TSS (NR_027065) promoter-TSS (NR_027065) -19 NR_027065 400866 Hs.278704 NM_001001789 ENSG00000223806 LINC00114 C21orf24|NCRNA00114 long intergenic non-protein coding RNA 114 ncRNA chr2-598 chr2 3303662 3303872 + 27.2 0.000 intron (NM_001330530, intron 3 of 9) intron (NM_001330530, intron 3 of 9) 74051 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr11-507 chr11 73072935 73073145 + 27.2 0.000 intron (NM_014824, intron 3 of 19) intron (NM_014824, intron 3 of 19) 69278 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr2-590 chr2 202265665 202265875 + 27.2 0.000 promoter-TSS (NM_015934) promoter-TSS (NM_015934) 7 NM_015934 51602 Hs.471104 NM_015934 ENSG00000055044 NOP58 HSPC120|NOP5|NOP5/NOP58 NOP58 ribonucleoprotein protein-coding chrX-34 chrX 68433494 68433704 + 27.2 0.000 promoter-TSS (NM_002547) promoter-TSS (NM_002547) -104 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr19-487 chr19 1028524 1028734 + 27.2 0.000 intron (NM_201277, intron 1 of 5) CpG 2021 NM_201277 1265 Hs.651512 NM_004368 ENSG00000064666 CNN2 - calponin 2 protein-coding chr11-839 chr11 79413337 79413547 + 27.2 0.000 intron (NM_001098816, intron 1 of 33) intron (NM_001098816, intron 1 of 33) 8784 NR_049841 100847000 NR_049841 ENSG00000266570 MIR5579 - microRNA 5579 ncRNA chr3-286 chr3 105869250 105869460 + 27.2 0.000 promoter-TSS (NM_001321820) promoter-TSS (NM_001321820) 46 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr4-420 chr4 185238503 185238713 + 27.2 0.000 intron (NM_001317781, intron 1 of 18) intron (NM_001317781, intron 1 of 18) 34371 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr6-218 chr6 35468057 35468267 + 27.2 0.000 promoter-TSS (NM_007104) promoter-TSS (NM_007104) -239 NM_007104 4736 Hs.148340 NM_007104 ENSG00000198755 RPL10A CSA19|Csa-19|L10A|NEDD6 ribosomal protein L10a protein-coding chr2-1218 chr2 236768872 236769082 + 27.2 0.000 Intergenic Intergenic 199152 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr12-237 chr12 105107688 105107898 + 27.2 0.000 promoter-TSS (NM_015275) promoter-TSS (NM_015275) 62 NM_001293640 23325 Hs.12144 NM_015275 ENSG00000136051 WASHC4 KIAA1033|MRT43|SWIP WASH complex subunit 4 protein-coding chr17-499 chr17 77834569 77834779 + 27.2 0.000 Intergenic Intergenic 49413 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr3-403 chr3 123789826 123790036 + 27.2 0.000 intron (NM_053025, intron 4 of 33) intron (NM_053025, intron 4 of 33) 94401 NM_053025 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr9-244 chr9 95091483 95091693 + 27.2 0.000 Intergenic Intergenic -5494 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr5-398 chr5 96562687 96562897 + 27.2 0.000 intron (NR_130776, intron 4 of 4) L1ME4b|LINE|L1 -99245 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr6-100 chr6 3118530 3118740 + 27.2 0.000 promoter-TSS (NM_004332) promoter-TSS (NM_004332) -76 NM_004332 670 Hs.10136 NM_004332 ENSG00000137274 BPHL BPH-RP|MCNAA|VACVASE biphenyl hydrolase like protein-coding chr2-174 chr2 61471100 61471310 + 27.2 0.000 promoter-TSS (NM_014709) promoter-TSS (NM_014709) -118 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding chr20-97 chr20 62182825 62183035 + 27.2 0.000 promoter-TSS (NM_015666) promoter-TSS (NM_015666) -95 NM_015666 26164 Hs.340636 NM_015666 ENSG00000101181 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome associated GTPase 2 protein-coding chr19-474 chr19 5103122 5103332 + 27.2 0.000 intron (NM_001370094, intron 9 of 10) intron (NM_001370094, intron 9 of 10) 134114 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr16-335 chr16 25031576 25031786 + 27.2 0.000 promoter-TSS (NR_038379) promoter-TSS (NR_038379) -60 NR_038379 554206 Hs.552959 NR_038379 ENSG00000262587 LOC554206 - leucine carboxyl methyltransferase 1 pseudogene pseudo chr11-194 chr11 11621956 11622166 + 27.2 0.000 promoter-TSS (NM_198516) promoter-TSS (NM_198516) -56 NM_001363464 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr16-222 chr16 1494337 1494547 + 27.2 0.000 exon (NM_016111, exon 2 of 21) exon (NM_016111, exon 2 of 21) 1082 NM_001351846 9894 Hs.271044 NM_016111 ENSG00000100726 TELO2 CLK2|TEL2|YHFS telomere maintenance 2 protein-coding chr19-545 chr19 42302450 42302660 + 27.2 0.000 promoter-TSS (NM_002573) promoter-TSS (NM_002573) 69 NM_002573 5050 Hs.466831 NM_002573 ENSG00000079462 PAFAH1B3 PAFAHG platelet activating factor acetylhydrolase 1b catalytic subunit 3 protein-coding chr13-143 chr13 32211972 32212182 + 27.2 0.000 intron (NM_023037, intron 34 of 60) intron (NM_023037, intron 34 of 60) 99877 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr1-932 chr1 204506497 204506707 + 27.2 0.000 Intergenic Intergenic -9777 NM_001278517 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr11-189 chr11 76860740 76860950 + 27.2 0.000 promoter-TSS (NM_018367) promoter-TSS (NM_018367) -73 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr9-508 chr9 131289692 131289902 + 27.2 0.000 promoter-TSS (NM_032728) promoter-TSS (NM_032728) 74 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr1-1015 chr1 151165898 151166108 + 27.2 0.000 promoter-TSS (NM_001204856) promoter-TSS (NM_001204856) -19 NM_024041 79005 Hs.732060 NM_024041 ENSG00000163156 SCNM1 - sodium channel modifier 1 protein-coding chr1-718 chr1 156801566 156801776 + 27.2 0.000 TTS (NM_005973) TTS (NM_005973) -14079 NM_001007792 4914 Hs.406293 NM_002529 ENSG00000198400 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic receptor tyrosine kinase 1 protein-coding chr10-437 chr10 118755086 118755296 + 27.2 0.000 promoter-TSS (NM_153810) promoter-TSS (NM_153810) -221 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr11-773 chr11 47917864 47918074 + 27.2 0.000 Intergenic Intergenic -62590 NM_002843 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr2-263 chr2 167292809 167293019 + 27.2 0.000 Intergenic CpG 105542 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr4-216 chr4 129254132 129254342 + 27.2 0.000 Intergenic Intergenic 158085 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr8-125 chr8 65260454 65260664 + 27.2 0.000 Intergenic L1MA1|LINE|L1 -80219 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA chr19-591 chr19 20167045 20167255 + 27.2 0.000 promoter-TSS (NM_052852) promoter-TSS (NM_052852) -64 NM_052852 90649 Hs.590991 NM_052852 ENSG00000256229 ZNF486 KRBO2 zinc finger protein 486 protein-coding chr10-434 chr10 79068862 79069072 + 27.2 0.000 promoter-TSS (NM_020338) promoter-TSS (NM_020338) 1 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr1-603 chr1 183471786 183471996 + 27.2 0.000 promoter-TSS (NR_040063) promoter-TSS (NR_040063) 91 NR_040063 284649 Hs.127384 NR_040063 ENSG00000232860 SMG7-AS1 DKFZP564C196 SMG7 antisense RNA 1 ncRNA chr20-287 chr20 24781466 24781676 + 27.2 0.000 Intergenic Intergenic -167698 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr22-273 chr22 42582074 42582284 + 27.2 0.000 promoter-TSS (NR_002184) promoter-TSS (NR_002184) -168 NR_002184 91695 Hs.534041 NR_002184 ENSG00000182841 RRP7BP RRP7B|dJ222E13.2 ribosomal RNA processing 7 homolog B, pseudogene pseudo chr5-441 chr5 150469731 150469941 + 27.2 0.000 Intergenic Intergenic 16156 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chr6-71 chr6 162727619 162727829 + 27.2 0.000 promoter-TSS (NM_013988) promoter-TSS (NM_013988) 42 NM_013988 5071 Hs.132954 NM_004562 ENSG00000185345 PRKN AR-JP|LPRS2|PARK2|PDJ parkin RBR E3 ubiquitin protein ligase protein-coding chr7-565 chr7 116355102 116355312 + 27.2 0.000 Intergenic Intergenic -68480 NR_130922 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr8-320 chr8 42501210 42501420 + 27.2 0.000 promoter-TSS (NM_001257180) promoter-TSS (NM_001257180) -84 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr4-298 chr4 3370119 3370329 + 27.2 0.000 promoter-TSS (NM_198227) promoter-TSS (NM_198227) 26 NM_198227 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr9-354 chr9 131278058 131278268 + 27.2 0.000 Intergenic Intergenic -1653 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr5-504 chr5 14915064 14915274 + 27.2 0.000 Intergenic Intergenic -43391 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr16-430 chr16 566007 566217 + 27.2 0.000 promoter-TSS (NM_001301159) promoter-TSS (NM_001301159) -893 NM_176677 283948 Hs.664267 NM_176677 ENSG00000257108 NHLRC4 - NHL repeat containing 4 protein-coding chr19-854 chr19 43120565 43120775 + 27.2 0.000 Intergenic Intergenic -37969 NM_031246 5670 Hs.709200 NM_031246 ENSG00000242221 PSG2 CEA|PSBG2|PSG1 pregnancy specific beta-1-glycoprotein 2 protein-coding chr10-330 chr10 125934404 125934614 + 27.2 0.000 intron (NM_001363549, intron 1 of 10) intron (NM_001363549, intron 1 of 10) 37703 NM_001363549 92565 Hs.352591 NM_145235 ENSG00000203780 FANK1 HSD13 fibronectin type III and ankyrin repeat domains 1 protein-coding chr16-502 chr16 11910255 11910465 + 27.2 0.000 intron (NM_001130007, intron 1 of 14) intron (NM_001130007, intron 1 of 14) 5596 NM_002094 2935 Hs.528780 NM_002094 ENSG00000103342 GSPT1 551G9.2|ETF3A|GST1|eRF3a G1 to S phase transition 1 protein-coding chr7-438 chr7 135193782 135193992 + 27.2 0.000 intron (NM_014149, intron 9 of 14) intron (NM_014149, intron 9 of 14) 13191 NR_106764 102465254 NR_106764 ENSG00000277138 MIR6509 hsa-mir-6509 microRNA 6509 ncRNA chr6-158 chr6 153002764 153002974 + 27.2 0.000 promoter-TSS (NM_019041) promoter-TSS (NM_019041) -54 NM_001301872 54516 Hs.225836 NM_019041 ENSG00000112031 MTRF1L HMRF1L|MRF1L|mtRF1a mitochondrial translational release factor 1 like protein-coding chr1-455 chr1 235128769 235128979 + 27.2 0.000 promoter-TSS (NR_002956) promoter-TSS (NR_002956) -37 NM_014765 9804 Hs.533192 NM_014765 ENSG00000173726 TOMM20 MAS20|MOM19|TOM20 translocase of outer mitochondrial membrane 20 protein-coding chr6-250 chr6 155014823 155015033 + 27.2 0.000 Intergenic Intergenic -75361 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr12-350 chr12 119877302 119877512 + 27.2 0.000 promoter-TSS (NM_001206999) promoter-TSS (NM_001206999) -87 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr22-298 chr22 42990190 42990400 + 27.2 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 24854 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr22-340 chr22 36339255 36339465 + 27.2 0.000 intron (NM_002473, intron 3 of 40) intron (NM_002473, intron 3 of 40) 48707 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr17-868 chr17 80732279 80732489 + 27.2 0.000 intron (NM_020761, intron 5 of 33) intron (NM_020761, intron 5 of 33) 73248 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr19-682 chr19 46890790 46891000 + 27.2 0.000 intron (NM_004491, intron 1 of 6) intron (NM_004491, intron 1 of 6) 29898 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr1-1217 chr1 240854560 240854770 + 27.2 0.000 intron (NM_001350116, intron 9 of 16) L3|LINE|CR1 -242510 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr4-293 chr4 54165505 54165715 + 27.2 0.000 Intergenic L2c|LINE|L2 -63683 NM_001347828 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chr7-173 chr7 102464895 102465105 + 27.2 0.000 promoter-TSS (NM_152892) promoter-TSS (NM_152892) 16 NM_152892 222229 Hs.274135 NM_152892 ENSG00000161036 LRWD1 CENP-33|ORCA leucine rich repeats and WD repeat domain containing 1 protein-coding chr9-455 chr9 91843788 91843998 + 27.2 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 106335 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr14-175 chr14 81219258 81219468 + 27.2 0.000 intron (NM_201595, intron 1 of 8) intron (NM_201595, intron 1 of 8) 1596 NM_015859 2957 Hs.592334 NM_015859 ENSG00000165417 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA subunit 1 protein-coding chr9-374 chr9 21836556 21836766 + 27.1 0.000 intron (NM_002451, intron 4 of 7) intron (NM_002451, intron 4 of 7) 34025 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr5-324 chr5 147404227 147404437 + 27.1 0.000 intron (NM_001197294, intron 8 of 13) intron (NM_001197294, intron 8 of 13) 49360 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr11-716 chr11 17256591 17256801 + 27.1 0.000 Intergenic MER44B|DNA|TcMar-Tigger -20018 NM_001352666 4925 Hs.654599 NM_005013 ENSG00000070081 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding chr4-201 chr4 139989477 139989687 + 27.1 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -138433 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr10-441 chr10 6086448 6086658 + 27.1 0.000 Intergenic Intergenic -2481 NM_032905 84991 Hs.498548 NM_032905 ENSG00000134453 RBM17 SPF45 RNA binding motif protein 17 protein-coding chr15-165 chr15 40906106 40906316 + 27.1 0.000 promoter-TSS (NR_135836) promoter-TSS (NR_135836) -598 NR_135836 105370943 Hs.574244 NR_135836 LOC105370943 - uncharacterized LOC105370943 ncRNA chr19-674 chr19 10119744 10119954 + 27.1 0.000 promoter-TSS (NM_003755) promoter-TSS (NM_003755) 50 NM_003755 8666 Hs.529059 NM_003755 ENSG00000130811 EIF3G EIF3-P42|EIF3S4|eIF3-delta|eIF3-p44 eukaryotic translation initiation factor 3 subunit G protein-coding chr12-376 chr12 45914207 45914417 + 27.1 0.000 Intergenic Intergenic 76262 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr2-527 chr2 46915889 46916099 + 27.1 0.000 promoter-TSS (NM_139279) promoter-TSS (NM_139279) 59 NM_001171510 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr10-462 chr10 97542322 97542532 + 27.1 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) -30014 NM_001291218 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr8-360 chr8 133130877 133131087 + 27.1 0.000 intron (NM_003235, intron 45 of 47) intron (NM_003235, intron 45 of 47) -28380 NM_001045556 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr22-209 chr22 43089305 43089515 + 27.1 0.000 promoter-TSS (NM_012263) promoter-TSS (NM_012263) 18 NR_027779 25809 Hs.660298 NM_012263 ENSG00000100271 TTLL1 C22orf7|HS323M22B tubulin tyrosine ligase like 1 protein-coding chr16-334 chr16 89581384 89581594 + 27.1 0.000 intron (NM_014427, intron 3 of 16) L1ME2|LINE|L1 5731 NM_014427 27132 Hs.461775 NM_014427 ENSG00000178773 CPNE7 - copine 7 protein-coding chr22-173 chr22 37199380 37199590 + 27.1 0.000 promoter-TSS (NM_001365878) promoter-TSS (NM_001365878) -62 NM_001365878 114904 Hs.22011 NM_031910 ENSG00000133466 C1QTNF6 CTFP6|CTRP6|ZACRP6 C1q and TNF related 6 protein-coding chr6-590 chr6 166046288 166046498 + 27.1 0.000 Intergenic Intergenic -51327 NR_147704 729681 Hs.520550 NR_147704 LOC729681 - uncharacterized LOC729681 ncRNA chr1-588 chr1 74197986 74198196 + 27.1 0.000 promoter-TSS (NM_001199328) promoter-TSS (NM_001199328) 85 NM_001322315 127255 Hs.644625 NM_145258 ENSG00000162620 LRRIQ3 LRRC44 leucine rich repeats and IQ motif containing 3 protein-coding chr9-478 chr9 115633194 115633404 + 27.1 0.000 Intergenic Intergenic 110940 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr20-271 chr20 50558542 50558752 + 27.1 0.000 intron (NM_001278618, intron 1 of 8) HAL1|LINE|L1 -27139 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr5-304 chr5 72037032 72037242 + 27.1 0.000 Intergenic Intergenic -70338 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr15-163 chr15 99249433 99249643 + 27.1 0.000 promoter-TSS (NM_001288615) promoter-TSS (NM_001288615) 43 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding chr11-541 chr11 2379659 2379869 + 27.1 0.000 intron (NM_004356, intron 1 of 7) intron (NM_004356, intron 1 of 7) -1772 NR_108080 101927682 Hs.675920 NR_108080 ENSG00000238184 CD81-AS1 - CD81 antisense RNA 1 ncRNA chr2-586 chr2 160051355 160051565 + 27.1 0.000 intron (NM_001007267, intron 1 of 26) intron (NM_001007267, intron 1 of 26) 11155 NM_001007267 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr15-282 chr15 62824194 62824404 + 27.1 0.000 TTS (NR_029709) TTS (NR_029709) 342 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr16-209 chr16 30091798 30092008 + 27.1 0.000 promoter-TSS (NM_004608) promoter-TSS (NM_004608) -19 NM_004608 6911 Hs.198301 NM_004608 ENSG00000149922 TBX6 SCDO5 T-box transcription factor 6 protein-coding chr10-291 chr10 17238778 17238988 + 27.1 0.000 Intergenic Intergenic -8898 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr16-253 chr16 67884730 67884940 + 27.1 0.000 promoter-TSS (NM_001348682) promoter-TSS (NM_001348682) -50 NM_001348682 123904 Hs.435464 NM_198443 ENSG00000188038 NRN1L MRCC2446|UNQ2446|cpg15-2 neuritin 1 like protein-coding chr18-131 chr18 39454100 39454310 + 27.1 0.000 intron (NR_024391, intron 3 of 3) MLT1J2|LTR|ERVL-MaLR 167970 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr3-339 chr3 126704011 126704221 + 27.1 0.000 promoter-TSS (NM_001320610) promoter-TSS (NM_001320610) -124 NM_001320610 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr17-211 chr17 81101837 81102047 + 27.1 0.000 intron (NM_001144888, intron 7 of 13) intron (NM_001144888, intron 7 of 13) 23431 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr17-378 chr17 81372507 81372717 + 27.1 0.000 Intergenic Intergenic 12513 NM_001347841 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr7-411 chr7 66741247 66741457 + 27.1 0.000 intron (NM_001367749, intron 1 of 4) CpG 619 NM_001367755 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chrX-179 chrX 45710313 45710523 + 27.1 0.000 Intergenic Intergenic -20670 NR_102268 392452 Hs.745266 NR_102268 LOC392452 - mitochondrial fission factor pseudogene pseudo chr1-1029 chr1 245197932 245198142 + 27.1 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) 36480 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr16-710 chr16 11155487 11155697 + 27.1 0.000 intron (NM_015226, intron 21 of 22) intron (NM_015226, intron 21 of 22) 100590 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr5-348 chr5 149433849 149434059 + 27.1 0.000 Intergenic Intergenic 3308 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr22-431 chr22 42841647 42841857 + 27.1 0.000 intron (NM_001142293, intron 2 of 14) intron (NM_001142293, intron 2 of 14) 15521 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr10-905 chr10 21572603 21572813 + 27.1 0.000 intron (NM_001324297, intron 4 of 24) AluSz|SINE|Alu 38536 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr18-31 chr18 47150475 47150685 + 27.1 0.000 promoter-TSS (NM_001318765) promoter-TSS (NM_001318765) -80 NM_001318765 84064 Hs.465041 NM_032124 ENSG00000167220 HDHD2 3110052N05Rik|HEL-S-301 haloacid dehalogenase like hydrolase domain containing 2 protein-coding chr17-582 chr17 4997658 4997868 + 27.1 0.000 promoter-TSS (NM_001167985) promoter-TSS (NM_001167985) -153 NM_001167987 388324 Hs.658926 NM_213726 ENSG00000196388 INCA1 HSD45 inhibitor of CDK, cyclin A1 interacting protein 1 protein-coding chr19-392 chr19 2282282 2282492 + 27.1 0.000 promoter-TSS (NM_198532) promoter-TSS (NM_198532) -212 NM_198532 374872 Hs.511803 NM_198532 ENSG00000188305 PEAK3 C19orf35 PEAK family member 3 protein-coding chr10-249 chr10 97318936 97319146 + 27.1 0.000 promoter-TSS (NM_005479) promoter-TSS (NM_005479) -230 NM_005479 10023 Hs.126057 NM_005479 ENSG00000165879 FRAT1 - FRAT regulator of WNT signaling pathway 1 protein-coding chr19-637 chr19 7479523 7479733 + 27.1 0.000 intron (NM_080662, intron 3 of 4) intron (NM_080662, intron 3 of 4) 9407 NM_080662 92960 Hs.515100 NM_080662 ENSG00000104883 PEX11G - peroxisomal biogenesis factor 11 gamma protein-coding chr8-408 chr8 53996112 53996322 + 27.1 0.000 intron (NM_201437, intron 2 of 8) L1ME4c|LINE|L1 26231 NM_201437 6917 Hs.491745 NM_006756 ENSG00000187735 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A1 protein-coding chr2-641 chr2 36403635 36403845 + 27.1 0.000 intron (NM_016441, intron 2 of 16) intron (NM_016441, intron 2 of 16) 47962 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr20-191 chr20 2470884 2471094 + 27.1 0.000 promoter-TSS (NM_198216) promoter-TSS (NM_198216) -200 NM_198216 6628 Hs.83753 NM_003091 ENSG00000125835 SNRPB CCMS|COD|SNRPB1|Sm-B/B'|SmB/B'|SmB/SmB'|snRNP-B small nuclear ribonucleoprotein polypeptides B and B1 protein-coding chr10-452 chr10 136096 136306 + 27.1 0.000 5' UTR (NM_001370102, exon 1 of 15) 5' UTR (NM_001370102, exon 1 of 15) 392 NM_001370109 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr17-418 chr17 44543654 44543864 + 27.1 0.000 Intergenic Intergenic -13725 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr15-121 chr15 73956846 73957056 + 27.1 0.000 Intergenic Intergenic -28703 NR_040068 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr3-626 chr3 196868422 196868632 + 27.1 0.000 intron (NM_152699, intron 1 of 9) CpG 607 NM_152699 205564 Hs.240770 NM_152699 ENSG00000119231 SENP5 - SUMO specific peptidase 5 protein-coding chr19-631 chr19 49690931 49691141 + 27.1 0.000 promoter-TSS (NM_001199752) promoter-TSS (NM_001199752) -72 NM_001136052 126129 Hs.112195 NM_152359 ENSG00000169169 CPT1C CATL1|CPT1-B|CPT1P|CPTI-B|CPTIC|SPG73 carnitine palmitoyltransferase 1C protein-coding chr10-641 chr10 137686 137896 + 27.1 0.000 intron (NM_001370109, intron 1 of 13) intron (NM_001370109, intron 1 of 13) 1982 NM_001370109 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr18-128 chr18 11500539 11500749 + 27.1 0.000 intron (NR_110778, intron 1 of 2) intron (NR_110778, intron 1 of 2) 10596 NR_110778 101927433 Hs.331210 NR_110778 ENSG00000267252 LINC01255 - long intergenic non-protein coding RNA 1255 ncRNA chr18-159 chr18 28768080 28768290 + 27.1 0.000 Intergenic Intergenic -591055 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr10-181 chr10 44959534 44959744 + 27.1 0.000 promoter-TSS (NR_033842) promoter-TSS (NR_033842) 50 NR_033842 220980 Hs.568801 NR_033842 ENSG00000224812 TMEM72-AS1 - TMEM72 antisense RNA 1 ncRNA chr11-399 chr11 31369834 31370044 + 27.1 0.000 promoter-TSS (NM_001367979) promoter-TSS (NM_001367979) 79 NM_181706 120526 Hs.187269 NM_181706 ENSG00000170946 DNAJC24 DPH4|JJJ3|ZCSL3 DnaJ heat shock protein family (Hsp40) member C24 protein-coding chr7-208 chr7 149873748 149873958 + 27.1 0.000 promoter-TSS (NM_001367788) promoter-TSS (NM_001367788) 9 NR_027040 401431 Hs.556998 NM_001008745 ENSG00000204934 ATP6V0E2-AS1 - ATP6V0E2 antisense RNA 1 ncRNA chr3-605 chr3 25854675 25854885 + 27.1 0.000 Intergenic LTR16A|LTR|ERVL 18915 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr7-460 chr7 24971431 24971641 + 27.1 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) 8642 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr5-362 chr5 138440389 138440599 + 27.1 0.000 intron (NM_016606, intron 1 of 7) intron (NM_016606, intron 1 of 7) 1437 NR_073449 51308 Hs.416090 NM_016606 ENSG00000132563 REEP2 C5orf19|SGC32445|SPG72|Yip2d receptor accessory protein 2 protein-coding chr2-481 chr2 112692608 112692818 + 27.1 0.000 Intergenic Intergenic -28773 NM_001350494 284958 Hs.589714 NM_001350494 ENSG00000144130 NT5DC4 - 5'-nucleotidase domain containing 4 protein-coding chr4-226 chr4 2468964 2469174 + 27.1 0.000 promoter-TSS (NM_001185010) promoter-TSS (NM_001185010) -37 NM_001185010 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr11-687 chr11 13135554 13135764 + 27.1 0.000 Intergenic Intergenic 126343 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr7-226 chr7 6729601 6729811 + 27.1 0.000 Intergenic CpG -5599 NR_002217 441194 Hs.715590 NR_002217 ENSG00000187953 PMS2CL PMS2P13 PMS2 C-terminal like pseudogene pseudo chr5-414 chr5 136053650 136053860 + 27.1 0.000 intron (NM_000358, intron 8 of 16) intron (NM_000358, intron 8 of 16) 24767 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding chr16-358 chr16 82603943 82604153 + 27.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -22921 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr4-80 chr4 82900581 82900791 + 27.1 0.000 promoter-TSS (NM_024672) promoter-TSS (NM_024672) 36 NM_001317776 79725 Hs.582050 NM_024672 ENSG00000168152 THAP9 hTh9 THAP domain containing 9 protein-coding chr16-464 chr16 50251411 50251621 + 27.1 0.000 Intergenic MIRb|SINE|MIR -15035 NM_001114 113 Hs.513578 NM_001114 ENSG00000121281 ADCY7 AC7 adenylate cyclase 7 protein-coding chr19-735 chr19 5968171 5968381 + 27.1 0.000 intron (NM_003624, intron 1 of 16) MIRb|SINE|MIR 9864 NM_007320 8498 Hs.531752 NM_003624 ENSG00000031823 RANBP3 - RAN binding protein 3 protein-coding chr2-439 chr2 112275340 112275550 + 27.1 0.000 promoter-TSS (NM_198581) promoter-TSS (NM_198581) -152 NM_198581 376940 Hs.190477 NM_198581 ENSG00000188177 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding chr12-434 chr12 122872035 122872245 + 27.1 0.000 intron (NM_024667, intron 1 of 3) intron (NM_024667, intron 1 of 3) 23984 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr11-929 chr11 35549902 35550112 + 27.1 0.000 Intergenic Intergenic -19707 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr18-136 chr18 12640647 12640857 + 27.1 0.000 intron (NM_020148, intron 1 of 15) L2b|LINE|L2 15980 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr3-409 chr3 171028543 171028753 + 27.1 0.000 Intergenic Intergenic -1928 NM_001278658 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr7-217 chr7 74174091 74174301 + 27.1 0.000 promoter-TSS (NM_022170) promoter-TSS (NM_022170) -160 NM_031992 7458 Hs.520943 NM_022170 ENSG00000106682 EIF4H WBSCR1|WSCR1|eIF-4H eukaryotic translation initiation factor 4H protein-coding chr3-201 chr3 28241412 28241622 + 27.0 0.000 promoter-TSS (NM_001331185) promoter-TSS (NM_001331185) -102 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr10-581 chr10 35896106 35896316 + 27.0 0.000 Intergenic Intergenic 117909 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr13-181 chr13 106567995 106568205 + 27.0 0.000 promoter-TSS (NM_018011) promoter-TSS (NM_018011) 37 NM_018011 55082 Hs.508644 NM_018011 ENSG00000134884 ARGLU1 - arginine and glutamate rich 1 protein-coding chr19-464 chr19 10695771 10695981 + 27.0 0.000 Intergenic Intergenic -5563 NM_031209 81890 Hs.631638 NM_031209 ENSG00000213339 QTRT1 FP3235|TGT|TGUT queuine tRNA-ribosyltransferase catalytic subunit 1 protein-coding chr4-292 chr4 109560909 109561119 + 27.0 0.000 intron (NM_017918, intron 1 of 7) intron (NM_017918, intron 1 of 7) 768 NM_017918 55013 Hs.234149 NM_017918 ENSG00000005059 MCUB CCDC109B mitochondrial calcium uniporter dominant negative beta subunit protein-coding chr1-818 chr1 110235899 110236109 + 27.0 0.000 3' UTR (NM_004978, exon 4 of 4) 3' UTR (NM_004978, exon 4 of 4) 25690 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr2-876 chr2 9235359 9235569 + 27.0 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 28652 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr11-730 chr11 72752747 72752957 + 27.0 0.000 promoter-TSS (NM_001040118) promoter-TSS (NM_001040118) -463 NM_001040118 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr22-236 chr22 23145483 23145693 + 27.0 0.000 intron (NR_146295, intron 1 of 9) CpG 111 NR_146295 9609 Hs.353024 NM_004914 ENSG00000100228 RAB36 - RAB36, member RAS oncogene family protein-coding chr16-421 chr16 64356279 64356489 + 27.0 0.000 Intergenic Intergenic 765679 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr18-86 chr18 35497665 35497875 + 27.0 0.000 promoter-TSS (NM_001308064) promoter-TSS (NM_001308064) -162 NM_001308064 125476 Hs.464903 NM_194281 ENSG00000153391 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding chr1-263 chr1 53196757 53196967 + 27.0 0.000 promoter-TSS (NM_001330589) promoter-TSS (NM_001330589) 38 NM_001330589 1376 Hs.713535 NM_000098 ENSG00000157184 CPT2 CPT1|CPTASE|IIAE4 carnitine palmitoyltransferase 2 protein-coding chr12-390 chr12 81668557 81668767 + 27.0 0.000 intron (NM_001220474, intron 2 of 30) intron (NM_001220474, intron 2 of 30) -70291 NM_001220478 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr17-390 chr17 82216706 82216916 + 27.0 0.000 Intergenic Intergenic -3969 NM_001316321 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr1-1095 chr1 109687497 109687707 + 27.0 0.000 promoter-TSS (NM_000561) promoter-TSS (NM_000561) -215 NM_146421 2944 Hs.301961 NM_000561 ENSG00000134184 GSTM1 GST1|GSTM1-1|GSTM1a-1a|GSTM1b-1b|GTH4|GTM1|H-B|MU|MU-1 glutathione S-transferase mu 1 protein-coding chr11-717 chr11 35795048 35795258 + 27.0 0.000 intron (NM_017583, intron 4 of 4) L2a|LINE|L2 132378 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr1-435 chr1 228150699 228150909 + 27.0 0.000 intron (NM_020435, intron 1 of 1) intron (NM_020435, intron 1 of 1) 874 NM_020435 57165 Hs.100072 NM_020435 ENSG00000198835 GJC2 CX46.6|Cx47|GJA12|HLD2|LMPH1C|LMPHM3|PMLDAR|SPG44 gap junction protein gamma 2 protein-coding chr21-127 chr21 35737979 35738189 + 27.0 0.000 Intergenic Intergenic 17369 NR_030414 768219 NR_030414 ENSG00000211590 MIR802 MIRN802|hsa-mir-802 microRNA 802 ncRNA chr9-502 chr9 83959304 83959514 + 27.0 0.000 Intergenic AluJb|SINE|Alu -2423 NM_001317997 84267 Hs.208914 NM_032307 ENSG00000165118 C9orf64 - chromosome 9 open reading frame 64 protein-coding chr13-228 chr13 76307111 76307321 + 27.0 0.000 Intergenic Intergenic -372084 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr7-844 chr7 16839775 16839985 + 27.0 0.000 Intergenic Intergenic -34881 NM_006408 10551 Hs.530009 NM_006408 ENSG00000106541 AGR2 AG-2|AG2|GOB-4|HAG-2|HEL-S-116|HPC8|PDIA17|XAG-2 anterior gradient 2, protein disulphide isomerase family member protein-coding chr9-560 chr9 35790456 35790666 + 27.0 0.000 Intergenic Intergenic -1848 NM_003995 4882 Hs.78518 NM_000907 ENSG00000159899 NPR2 AMDM|ANPRB|ANPb|ECDM|GUC2B|GUCY2B|NPRB|NPRBi|SNSK natriuretic peptide receptor 2 protein-coding chr2-771 chr2 44479481 44479691 + 27.0 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 117639 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr19-774 chr19 2289923 2290133 + 27.0 0.000 exon (NM_001101391, exon 2 of 2) exon (NM_001101391, exon 2 of 2) -7853 NM_198532 374872 Hs.511803 NM_198532 ENSG00000188305 PEAK3 C19orf35 PEAK family member 3 protein-coding chr17-371 chr17 83155657 83155867 + 27.0 0.000 Intergenic Intergenic -71135 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr16-601 chr16 48511294 48511504 + 27.0 0.000 Intergenic Intergenic 98781 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr7-586 chr7 137874478 137874688 + 27.0 0.000 TTS (NM_194071) TTS (NM_194071) -27719 NM_001321708 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr2-560 chr2 45699298 45699508 + 27.0 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 47728 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr16-436 chr16 68287942 68288152 + 27.0 0.000 intron (NM_003983, intron 4 of 10) intron (NM_003983, intron 4 of 10) 22899 NM_032178 84138 Hs.729520 NM_032178 ENSG00000103061 SLC7A6OS - solute carrier family 7 member 6 opposite strand protein-coding chr18-207 chr18 9612307 9612517 + 27.0 0.000 intron (NM_001042388, intron 2 of 19) intron (NM_001042388, intron 2 of 19) 2147 NM_005134 9989 Hs.743236 NM_005134 ENSG00000154845 PPP4R1 MEG1|PP4(Rmeg)|PP4R1 protein phosphatase 4 regulatory subunit 1 protein-coding chr1-343 chr1 1273964 1274174 + 27.0 0.000 promoter-TSS (NM_194458) promoter-TSS (NM_194458) -215 NM_194457 118424 Hs.191987 NM_058167 ENSG00000160087 UBE2J2 NCUBE-2|NCUBE2|PRO2121 ubiquitin conjugating enzyme E2 J2 protein-coding chr9-330 chr9 62838557 62838767 + 27.0 0.000 promoter-TSS (NR_135128) promoter-TSS (NR_135128) 217 NR_024496 442421 Hs.585349 NR_024496 PTGER4P2-CDK2AP2P2 - PTGER4P2-CDK2AP2P2 readthrough, transcribed pseudogene pseudo chr2-506 chr2 216412473 216412683 + 27.0 0.000 promoter-TSS (NM_001127207) promoter-TSS (NM_001127207) 164 NM_014140 50485 Hs.516674 NM_014140 ENSG00000138375 SMARCAL1 HARP|HHARP SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 protein-coding chr17-398 chr17 80260273 80260483 + 27.0 0.000 promoter-TSS (NM_001256071) promoter-TSS (NM_001256071) -474 NM_001256071 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr17-691 chr17 63647401 63647611 + 27.0 0.000 intron (NM_203351, intron 4 of 16) intron (NM_203351, intron 4 of 16) 25089 NM_203351 4215 Hs.29282 NM_002401 ENSG00000198909 MAP3K3 MAPKKK3|MEKK3 mitogen-activated protein kinase kinase kinase 3 protein-coding chr6-395 chr6 116087558 116087768 + 27.0 0.000 Intergenic Intergenic -13190 NM_152729 221294 Hs.520341 NM_152729 ENSG00000178425 NT5DC1 C6orf200|LP2642|NT5C2L1 5'-nucleotidase domain containing 1 protein-coding chr12-429 chr12 53560428 53560638 + 27.0 0.000 intron (NR_073163, intron 2 of 12) intron (NR_073163, intron 2 of 12) 46549 NR_046221 100652999 Hs.633602 NR_046221 ENSG00000257550 LOC100652999 - uncharacterized LOC100652999 ncRNA chr2-290 chr2 241701383 241701593 + 27.0 0.000 promoter-TSS (NM_001330162) promoter-TSS (NM_001330162) -551 NM_001330162 84289 Hs.529172 NM_032329 ENSG00000168395 ING5 p28ING5 inhibitor of growth family member 5 protein-coding chr14-258 chr14 101972482 101972692 + 27.0 0.000 intron (NM_001376, intron 1 of 77) intron (NM_001376, intron 1 of 77) 8014 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr4-163 chr4 65670419 65670629 + 27.0 0.000 promoter-TSS (NM_001281766) promoter-TSS (NM_001281766) -29 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr18-186 chr18 32921511 32921721 + 27.0 0.000 Intergenic MER44B|DNA|TcMar-Tigger -148593 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr22-247 chr22 46592484 46592694 + 27.0 0.000 intron (NM_001366660, intron 1 of 17) intron (NM_001366660, intron 1 of 17) 15501 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr9-326 chr9 137277585 137277795 + 27.0 0.000 promoter-TSS (NM_017723) promoter-TSS (NM_017723) -36 NM_017723 54863 Hs.495541 NM_017723 ENSG00000198113 TOR4A C9orf167 torsin family 4 member A protein-coding chrX-102 chrX 106802540 106802750 + 27.0 0.000 promoter-TSS (NM_017752) promoter-TSS (NM_017752) -28 NM_017752 54885 Hs.351798 NM_017752 ENSG00000133138 TBC1D8B GRAMD8B TBC1 domain family member 8B protein-coding chr9-359 chr9 94726500 94726710 + 27.0 0.000 promoter-TSS (NM_032823) promoter-TSS (NM_032823) -64 NM_032823 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr11-438 chr11 4094504 4094714 + 27.0 0.000 promoter-TSS (NM_001033) promoter-TSS (NM_001033) -76 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr18-87 chr18 36309562 36309772 + 27.0 0.000 intron (NM_001281740, intron 1 of 28) intron (NM_001281740, intron 1 of 28) 11954 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr20-194 chr20 38926142 38926352 + 27.0 0.000 promoter-TSS (NM_030919) promoter-TSS (NM_030919) -170 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr1-639 chr1 204073096 204073306 + 27.0 0.000 promoter-TSS (NM_005686) promoter-TSS (NM_005686) 86 NM_005686 9580 Hs.201671 NM_005686 ENSG00000143842 SOX13 ICA12|Sox-13 SRY-box transcription factor 13 protein-coding chr7-313 chr7 65373862 65374072 + 27.0 0.000 5' UTR (NM_001287533, exon 1 of 5) 5' UTR (NM_001287533, exon 1 of 5) 112 NM_001287533 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr3-491 chr3 188864085 188864295 + 27.0 0.000 intron (NM_001167672, intron 7 of 9) intron (NM_001167672, intron 7 of 9) 83449 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr22-400 chr22 40183341 40183551 + 27.0 0.000 intron (NM_015088, intron 1 of 20) intron (NM_015088, intron 1 of 20) 5521 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr17-846 chr17 5776202 5776412 + 27.0 0.000 intron (NR_040000, intron 1 of 3) MLT1H|LTR|ERVL-MaLR 4073 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr10-204 chr10 6163795 6164005 + 27.0 0.000 intron (NM_001282630, intron 1 of 14) CpG -11638 NR_039698 100628560 NR_039698 ENSG00000283634 MIR3155B hsa-mir-3155b microRNA 3155b ncRNA chr10-558 chr10 125102460 125102670 + 27.0 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) 56212 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr1-722 chr1 174021660 174021870 + 27.0 0.000 Intergenic CpG -28693 NM_172071 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding chr2-1765 chr2 142880457 142880667 + 27.0 0.000 intron (NM_001032998, intron 1 of 11) intron (NM_001032998, intron 1 of 11) 2898 NM_003937 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr12-461 chr12 90682553 90682763 + 27.0 0.000 Intergenic Intergenic -235365 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr1-727 chr1 238409262 238409472 + 27.0 0.000 Intergenic LTR8B|LTR|ERV1 76650 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr5-402 chr5 149453381 149453591 + 27.0 0.000 Intergenic Intergenic 22840 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr17-335 chr17 39637058 39637268 + 27.0 0.000 promoter-TSS (NM_001165937) promoter-TSS (NM_001165937) 19 NM_006804 10948 Hs.728838 NM_006804 ENSG00000131748 STARD3 CAB1|MLN64|es64 StAR related lipid transfer domain containing 3 protein-coding chr10-422 chr10 125064647 125064857 + 26.9 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -31882 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr5-528 chr5 14417334 14417544 + 26.9 0.000 intron (NM_007118, intron 33 of 56) intron (NM_007118, intron 33 of 56) -46544 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr1-449 chr1 150363993 150364203 + 26.9 0.000 promoter-TSS (NM_001297673) promoter-TSS (NM_001297673) -13 NM_001297674 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding chr1-557 chr1 183318484 183318694 + 26.9 0.000 intron (NM_015039, intron 1 of 10) intron (NM_015039, intron 1 of 10) -13715 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr17-523 chr17 81538963 81539173 + 26.9 0.000 TTS (NM_025161) TTS (NM_025161) 10691 NM_001077182 25794 Hs.118555 NM_012418 ENSG00000186765 FSCN2 RFSN|RP30 fascin actin-bundling protein 2, retinal protein-coding chr1-948 chr1 33163719 33163929 + 26.9 0.000 intron (NM_018207, intron 2 of 4) intron (NM_018207, intron 2 of 4) 12726 NM_001330483 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr1-707 chr1 19311340 19311550 + 26.9 0.000 promoter-TSS (NR_109848) promoter-TSS (NR_109848) 701 NM_003689 8574 Hs.571886 NM_003689 ENSG00000053371 AKR7A2 AFAR|AFAR1|AFB1-AR1|AKR7 aldo-keto reductase family 7 member A2 protein-coding chr4-106 chr4 2843633 2843843 + 26.9 0.000 promoter-TSS (NM_001354754) promoter-TSS (NM_001354754) -106 NM_001354761 118 Hs.183706 NM_001119 ENSG00000087274 ADD1 ADDA adducin 1 protein-coding chr17-651 chr17 74988031 74988241 + 26.9 0.000 intron (NM_014603, intron 1 of 4) CpG 504 NM_014603 30850 Hs.78358 NM_014603 ENSG00000109089 CDR2L HUMPPA cerebellar degeneration related protein 2 like protein-coding chr5-214 chr5 140691347 140691557 + 26.9 0.000 promoter-TSS (NM_002109) promoter-TSS (NM_002109) -3 NM_001278732 23438 Hs.432560 NM_012208 ENSG00000112855 HARS2 HARSL|HARSR|HO3|HisRS|PRLTS2 histidyl-tRNA synthetase 2, mitochondrial protein-coding chr1-524 chr1 109041957 109042167 + 26.9 0.000 5' UTR (NM_001142550, exon 1 of 15) 5' UTR (NM_001142550, exon 1 of 15) 166 NM_014969 22911 Hs.570055 NM_014969 ENSG00000085433 WDR47 - WD repeat domain 47 protein-coding chr2-740 chr2 223846655 223846865 + 26.9 0.000 Intergenic L2|LINE|L2 -9178 NR_110906 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr8-236 chr8 144465267 144465477 + 26.9 0.000 promoter-TSS (NM_138496) promoter-TSS (NM_138496) 120 NM_032687 50626 Hs.459379 NM_032687 ENSG00000187954 CYHR1 CHRP cysteine and histidine rich 1 protein-coding chr4-456 chr4 182752266 182752476 + 26.9 0.000 intron (NM_001080477, intron 20 of 27) intron (NM_001080477, intron 20 of 27) 164882 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr1-531 chr1 201538868 201539078 + 26.9 0.000 Intergenic CpG 19069 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr2-925 chr2 9594661 9594871 + 26.9 0.000 intron (NM_006826, intron 2 of 5) intron (NM_006826, intron 2 of 5) 36231 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr6-131 chr6 129710172 129710382 + 26.9 0.000 promoter-TSS (NM_033515) promoter-TSS (NM_033515) -100 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr12-389 chr12 57765350 57765560 + 26.9 0.000 exon (NM_000785, exon 3 of 9) exon (NM_000785, exon 3 of 9) 1623 NM_000785 1594 Hs.524528 NM_000785 ENSG00000111012 CYP27B1 CP2B|CYP1|CYP1alpha|CYP27B|P450c1|PDDR|VDD1|VDDR|VDDRI|VDR cytochrome P450 family 27 subfamily B member 1 protein-coding chr1-620 chr1 220748210 220748420 + 26.9 0.000 promoter-TSS (NM_001331042) promoter-TSS (NM_001331042) -7 NM_001331042 54996 Hs.369042 NM_017898 ENSG00000117791 MARC2 MOSC2 mitochondrial amidoxime reducing component 2 protein-coding chr8-387 chr8 38899120 38899330 + 26.9 0.000 Intergenic Intergenic -2121 NM_021623 59339 Hs.369123 NM_021623 ENSG00000169499 PLEKHA2 TAPP2 pleckstrin homology domain containing A2 protein-coding chr7-606 chr7 22822734 22822944 + 26.9 0.000 promoter-TSS (NM_019059) promoter-TSS (NM_019059) 10 NM_019059 54543 Hs.112318 NM_019059 ENSG00000196683 TOMM7 TOM7 translocase of outer mitochondrial membrane 7 protein-coding chr10-444 chr10 86795465 86795675 + 26.9 0.000 intron (NM_004329, intron 1 of 12) intron (NM_004329, intron 1 of 12) 38931 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr3-369 chr3 58433594 58433804 + 26.9 0.000 non-coding (NR_033384, exon 1 of 9) non-coding (NR_033384, exon 1 of 9) 133 NM_000925 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr2-1117 chr2 201126581 201126791 + 26.9 0.000 intron (NM_001351593, intron 1 of 8) LTR67B|LTR|ERVL -2279 NM_001308042 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS|cFLIP CASP8 and FADD like apoptosis regulator protein-coding chr17-1023 chr17 43814870 43815080 + 26.9 0.000 intron (NR_148344, intron 14 of 19) L1MC4|LINE|L1 18219 NR_148343 4356 Hs.396566 NM_001932 ENSG00000161647 MPP3 DLG3 membrane palmitoylated protein 3 protein-coding chr9-484 chr9 134670037 134670247 + 26.9 0.000 intron (NM_001278074, intron 1 of 65) L1ME4a|LINE|L1 -17299 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr19-417 chr19 10106192 10106402 + 26.9 0.000 promoter-TSS (NM_020230) promoter-TSS (NM_020230) -65 NM_001040664 692312 NM_001040664 ENSG00000243207 PPAN-P2RY11 BXDC3|P2RY11|P2Y11|PPAN|SSF1|Ssf-1 PPAN-P2RY11 readthrough protein-coding chr7-504 chr7 90403827 90404037 + 26.9 0.000 intron (NM_012129, intron 1 of 2) intron (NM_012129, intron 1 of 2) 471 NM_012129 9069 Hs.731917 NM_012129 ENSG00000157224 CLDN12 - claudin 12 protein-coding chr2-608 chr2 101205672 101205882 + 26.9 0.000 Intergenic Intergenic -47109 NM_017546 55571 Hs.744080 NM_017546 ENSG00000158435 CNOT11 C2orf29|C40 CCR4-NOT transcription complex subunit 11 protein-coding chr13-111 chr13 26557369 26557579 + 26.9 0.000 promoter-TSS (NM_001291965) promoter-TSS (NM_001291965) -209 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr1-1156 chr1 33586219 33586429 + 26.9 0.000 intron (NM_052896, intron 47 of 69) intron (NM_052896, intron 47 of 69) 113679 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr3-644 chr3 141302401 141302611 + 26.9 0.000 Intergenic Intergenic -21680 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr8-193 chr8 124364283 124364493 + 26.9 0.000 intron (NM_194291, intron 1 of 6) intron (NM_194291, intron 1 of 6) 8311 NM_194291 157378 Hs.100691 NM_194291 ENSG00000164983 TMEM65 - transmembrane protein 65 protein-coding chr1-637 chr1 178537142 178537352 + 26.9 0.000 Intergenic Intergenic -5549 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 (putative) ncRNA chr15-194 chr15 101121763 101121973 + 26.9 0.000 Intergenic Intergenic 130180 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr16-207 chr16 720549 720759 + 26.9 0.000 promoter-TSS (NM_001271285) promoter-TSS (NM_001271285) -492 NM_001271285 65990 Hs.166244 NM_023933 ENSG00000103254 FAM173A C16orf24 family with sequence similarity 173 member A protein-coding chr11-821 chr11 63841623 63841833 + 26.9 0.000 intron (NM_001163296, intron 1 of 16) intron (NM_001163296, intron 1 of 16) 2618 NM_001163296 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr18-140 chr18 8800475 8800685 + 26.9 0.000 intron (NM_015210, intron 10 of 16) intron (NM_015210, intron 10 of 16) 83199 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr16-264 chr16 14409719 14409929 + 26.9 0.000 Intergenic Intergenic -39558 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr19-495 chr19 46850809 46851019 + 26.9 0.000 promoter-TSS (NM_001301081) promoter-TSS (NM_001301081) -68 NM_001301078 1175 Hs.119591 NM_004069 ENSG00000042753 AP2S1 AP17|CLAPS2|FBH3|FBHOk|HHC3 adaptor related protein complex 2 subunit sigma 1 protein-coding chr20-133 chr20 39717992 39718202 + 26.9 0.000 Intergenic Intergenic -286364 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr18-161 chr18 73923976 73924186 + 26.9 0.000 Intergenic Intergenic 223753 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr1-850 chr1 235741416 235741626 + 26.9 0.000 exon (NM_001301365, exon 31 of 53) exon (NM_001301365, exon 31 of 53) -90767 NM_001098721 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr9-338 chr9 129726815 129727025 + 26.9 0.000 Intergenic Intergenic -8214 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr10-426 chr10 132223104 132223314 + 26.9 0.000 intron (NM_001318878, intron 8 of 11) intron (NM_001318878, intron 8 of 11) 25899 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr6-128 chr6 33771463 33771673 + 26.9 0.000 3' UTR (NM_001348709, exon 9 of 9) 3' UTR (NM_001348709, exon 9 of 9) 15374 NM_001143944 221496 Hs.444845 NM_181336 ENSG00000161904 LEMD2 CTRCT42|LEM2|NET25|dJ482C21.1 LEM domain containing 2 protein-coding chr3-366 chr3 45085315 45085525 + 26.9 0.000 3' UTR (NM_022842, exon 9 of 9) 3' UTR (NM_022842, exon 9 of 9) 55277 NM_001308394 7123 Hs.476092 NM_003278 ENSG00000163815 CLEC3B TN|TNA C-type lectin domain family 3 member B protein-coding chr15-405 chr15 73800601 73800811 + 26.9 0.000 Intergenic Intergenic 32492 NR_120352 101929221 NR_120352 INSYN1-AS1 C15orf59-AS1 INSYN1 antisense RNA 1 ncRNA chr1-587 chr1 67390234 67390444 + 26.9 0.000 intron (NM_001258215, intron 13 of 13) intron (NM_001258215, intron 13 of 13) 40063 NM_001018067 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr4-435 chr4 184514377 184514587 + 26.9 0.000 intron (NR_147158, intron 1 of 2) intron (NR_147158, intron 1 of 2) 23101 NR_147158 105377585 Hs.519127 NR_147158 ENSG00000271538 LINC02427 - long intergenic non-protein coding RNA 2427 ncRNA chr10-659 chr10 126398181 126398391 + 26.9 0.000 Intergenic Intergenic -9809 NM_001288973 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr19-983 chr19 8023434 8023644 + 26.9 0.000 Intergenic L1MB7|LINE|L1 -17898 NM_001419 1994 Hs.184492 NM_001419 ENSG00000066044 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding chr17-665 chr17 75059926 75060136 + 26.9 0.000 intron (NM_015353, intron 4 of 5) intron (NM_015353, intron 4 of 5) 12806 NM_015353 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr16-928 chr16 1691501 1691711 + 26.9 0.000 intron (NM_144570, intron 2 of 4) intron (NM_144570, intron 2 of 4) 13327 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 JPT2 C16orf34|HN1L|L11 Jupiter microtubule associated homolog 2 protein-coding chr17-690 chr17 62614184 62614394 + 26.9 0.000 3' UTR (NM_001284333, exon 23 of 23) 3' UTR (NM_001284333, exon 23 of 23) -13381 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr3-748 chr3 177824201 177824411 + 26.9 0.000 intron (NR_110826, intron 1 of 2) intron (NR_110826, intron 1 of 2) 7441 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr3-721 chr3 27533956 27534166 + 26.9 0.000 Intergenic Intergenic -49677 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr7-331 chr7 906895 907105 + 26.9 0.000 intron (NM_006869, intron 4 of 10) intron (NM_006869, intron 4 of 10) 13889 NM_001284311 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr1-2012 chr1 85440326 85440536 + 26.9 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) 24728 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr1-427 chr1 32291822 32292032 + 26.9 0.000 promoter-TSS (NM_004964) promoter-TSS (NM_004964) -156 NM_004964 3065 Hs.88556 NM_004964 ENSG00000116478 HDAC1 GON-10|HD1|KDAC1|RPD3|RPD3L1 histone deacetylase 1 protein-coding chr15-188 chr15 78108357 78108567 + 26.9 0.000 intron (NM_001271889, intron 2 of 3) intron (NM_001271889, intron 2 of 3) 15877 NM_001101404 646892 Hs.569511 NM_001101404 ENSG00000183476 SH2D7 - SH2 domain containing 7 protein-coding chr7-375 chr7 6484019 6484229 + 26.9 0.000 promoter-TSS (NM_006854) promoter-TSS (NM_006854) 28 NM_001100603 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr22-198 chr22 30575264 30575474 + 26.9 0.000 promoter-TSS (NM_001318104) promoter-TSS (NM_001318104) -704 NM_001318103 9514 Hs.17958 NM_004861 ENSG00000128242 GAL3ST1 CST galactose-3-O-sulfotransferase 1 protein-coding chr1-679 chr1 152001674 152001884 + 26.9 0.000 Intergenic Intergenic -7920 NM_002966 6281 Hs.143873 NM_002966 ENSG00000197747 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding chr9-431 chr9 104895666 104895876 + 26.9 0.000 intron (NM_005502, intron 2 of 49) intron (NM_005502, intron 2 of 49) 32384 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr2-728 chr2 23712482 23712692 + 26.9 0.000 Intergenic Intergenic 214536 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr19-461 chr19 49443664 49443874 + 26.9 0.000 Intergenic CpG -2242 NM_020309 57030 Hs.375616 NM_020309 ENSG00000104888 SLC17A7 BNPI|VGLUT1 solute carrier family 17 member 7 protein-coding chr5-322 chr5 56952463 56952673 + 26.9 0.000 promoter-TSS (NM_001297599) promoter-TSS (NM_001297599) -438 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr1-635 chr1 112522672 112522882 + 26.7 0.000 TTS (NM_138727) TTS (NM_138727) 13812 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr8-321 chr8 47610171 47610381 + 26.7 0.000 intron (NM_001080394, intron 10 of 19) intron (NM_001080394, intron 10 of 19) -43812 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr1-1044 chr1 51648496 51648706 + 26.7 0.000 intron (NM_148906, intron 1 of 22) intron (NM_148906, intron 1 of 22) 31509 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr1-177 chr1 244048341 244048551 + 26.7 0.000 promoter-TSS (NM_001278196) promoter-TSS (NM_001278196) -493 NM_001278196 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr16-530 chr16 85465886 85466096 + 26.7 0.000 Intergenic Intergenic -145418 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr16-577 chr16 89565951 89566161 + 26.7 0.000 3' UTR (NM_000977, exon 6 of 6) 3' UTR (NM_000977, exon 6 of 6) 4626 NR_002450 606500 NR_002450 SNORD68 HBII-202 small nucleolar RNA, C/D box 68 snoRNA chr8-269 chr8 141228032 141228242 + 26.7 0.000 intron (NM_001286646, intron 1 of 7) intron (NM_001286646, intron 1 of 7) 437 NM_001286648 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr4-105 chr4 2364775 2364985 + 26.7 0.000 promoter-TSS (NM_001172659) promoter-TSS (NM_001172659) -66 NM_001172659 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr17-352 chr17 80959682 80959892 + 26.7 0.000 intron (NM_020761, intron 29 of 33) intron (NM_020761, intron 29 of 33) 11426 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr2-923 chr2 237465595 237465805 + 26.7 0.000 Intergenic MER44B|DNA|TcMar-Tigger -20710 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr17-511 chr17 80792057 80792267 + 26.7 0.000 intron (NM_020761, intron 7 of 33) intron (NM_020761, intron 7 of 33) 13470 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr22-447 chr22 40499269 40499479 + 26.7 0.000 intron (NM_020831, intron 3 of 14) intron (NM_020831, intron 3 of 14) -22426 NR_109965 101927257 Hs.662725 NR_109965 ENSG00000232564 MRTFA-AS1 - MRTFA antisense RNA 1 ncRNA chr9-369 chr9 125241320 125241530 + 26.7 0.000 promoter-TSS (NM_005347) promoter-TSS (NM_005347) -82 NM_005347 3309 Hs.743241 NM_005347 ENSG00000044574 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock protein family A (Hsp70) member 5 protein-coding chr1-419 chr1 46668338 46668548 + 26.7 0.000 promoter-TSS (NM_001042546) promoter-TSS (NM_001042546) -16 NM_022745 64756 Hs.100874 NM_022745 ENSG00000123472 ATPAF1 ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding chr1-636 chr1 151735079 151735289 + 26.7 0.000 Intergenic Intergenic 13662 NM_001144956 284485 Hs.297967 NM_001144956 ENSG00000178796 RIIAD1 C1orf230|NCRNA00166 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 protein-coding chr19-695 chr19 35045812 35046022 + 26.7 0.000 intron (NM_002151, intron 3 of 13) intron (NM_002151, intron 3 of 13) 5411 NM_002151 3249 Hs.182385 NM_002151 ENSG00000105707 HPN TMPRSS1 hepsin protein-coding chr12-737 chr12 122518012 122518222 + 26.7 0.000 intron (NM_023012, intron 4 of 9) AluJb|SINE|Alu 8819 NR_036434 65117 Hs.432996 NM_023012 ENSG00000111011 RSRC2 - arginine and serine rich coiled-coil 2 protein-coding chr5-582 chr5 39256655 39256865 + 26.7 0.000 intron (NM_001243093, intron 1 of 18) intron (NM_001243093, intron 1 of 18) 13889 NM_001243093 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr1-1921 chr1 246875344 246875554 + 26.7 0.000 intron (NM_015446, intron 24 of 35) Tigger1|DNA|TcMar-Tigger 55909 NM_015446 25909 Hs.300887 NM_015446 ENSG00000153207 AHCTF1 ELYS|MST108|MSTP108|TMBS62 AT-hook containing transcription factor 1 protein-coding chr9-289 chr9 5437755 5437965 + 26.7 0.000 promoter-TSS (NM_018465) promoter-TSS (NM_018465) 65 NM_018465 55848 Hs.584242 NM_018465 ENSG00000107020 PLGRKT AD025|C9orf46|MDS030|PLG-RKT|Plg-R(KT) plasminogen receptor with a C-terminal lysine protein-coding chr1-1425 chr1 39268224 39268434 + 26.7 0.000 intron (NM_012090, intron 5 of 92) intron (NM_012090, intron 5 of 92) -140744 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr3-402 chr3 113745195 113745405 + 26.7 0.000 intron (NM_025146, intron 1 of 4) AmnSINE1|SINE|5S-Deu-L2 949 NM_001308445 80218 Hs.372378 NM_025146 ENSG00000121579 NAA50 MAK3|NAT13|NAT13P|NAT5|NAT5P|SAN|hNaa50p N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding chr22-437 chr22 27457166 27457376 + 26.7 0.000 Intergenic Intergenic 146620 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr2-703 chr2 61255666 61255876 + 26.7 0.000 intron (NM_014709, intron 48 of 79) Tigger7|DNA|TcMar-Tigger 78353 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr22-297 chr22 42680707 42680917 + 26.7 0.000 Intergenic ERVL-E-int|LTR|ERVL -31420 NM_000398 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr2-1236 chr2 98334486 98334696 + 26.7 0.000 Intergenic Intergenic -11564 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr15-82 chr15 88546498 88546708 + 26.7 0.000 promoter-TSS (NR_135739) promoter-TSS (NR_135739) 78 NR_135742 55070 Hs.655064 NM_017996 ENSG00000140543 DET1 - DET1 partner of COP1 E3 ubiquitin ligase protein-coding chr1-719 chr1 158010894 158011104 + 26.7 0.000 intron (NM_001286349, intron 1 of 12) intron (NM_001286349, intron 1 of 12) -14551 NR_145471 100505785 Hs.664656 NR_145471 KIRREL1-IT1 KIRREL-IT1 KIRREL1 intronic transcript 1 ncRNA chr14-352 chr14 103641138 103641348 + 26.7 0.000 intron (NM_182923, intron 1 of 14) L1MC3|LINE|L1 12055 NM_001130107 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr2-778 chr2 71952877 71953087 + 26.7 0.000 Intergenic Intergenic 194880 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr7-431 chr7 132650525 132650735 + 26.7 0.000 intron (NR_046323, intron 1 of 4) intron (NR_046323, intron 1 of 4) 1836 NR_046323 286023 Hs.671875 NM_173682 ENSG00000183470 FLJ40288 - uncharacterized FLJ40288 ncRNA chr13-252 chr13 84192193 84192403 + 26.7 0.000 intron (NR_046871, intron 1 of 6) intron (NR_046871, intron 1 of 6) 51696 NR_046871 100874128 Hs.578060 NR_046871 LINC00333 NCRNA00333 long intergenic non-protein coding RNA 333 ncRNA chr16-176 chr16 10744060 10744270 + 26.7 0.000 intron (NM_002484, intron 2 of 10) CpG 296 NM_001323597 4682 Hs.81469 NM_002484 ENSG00000103274 NUBP1 CIAO5|NBP|NBP1|NBP35 nucleotide binding protein 1 protein-coding chr4-319 chr4 148777053 148777263 + 26.7 0.000 Intergenic Intergenic 165220 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr2-286 chr2 86563282 86563492 + 26.7 0.000 promoter-TSS (NM_001005753) promoter-TSS (NM_001005753) 56 NM_001193517 51652 Hs.591582 NM_016079 ENSG00000115561 CHMP3 CGI-149|NEDF|VPS24 charged multivesicular body protein 3 protein-coding chr2-1019 chr2 10659904 10660114 + 26.7 0.000 intron (NR_048552, intron 8 of 19) intron (NR_048552, intron 8 of 19) 29966 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr18-165 chr18 30486845 30487055 + 26.7 0.000 Intergenic Intergenic 188040 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr1-421 chr1 151190044 151190254 + 26.7 0.000 promoter-TSS (NM_001271088) promoter-TSS (NM_001271088) 48 NM_001271088 6944 Hs.2430 NM_005997 ENSG00000163159 VPS72 CFL1|Swc2|TCFL1|YL-1|YL1 vacuolar protein sorting 72 homolog protein-coding chr11-395 chr11 74278784 74278994 + 26.7 0.000 intron (NM_001288748, intron 8 of 12) intron (NM_001288748, intron 8 of 12) -32473 NR_120556 101928580 Hs.569025 NR_120556 ENSG00000246211 P4HA3-AS1 - P4HA3 antisense RNA 1 ncRNA chr2-333 chr2 172085233 172085443 + 26.7 0.000 promoter-TSS (NM_001038493) promoter-TSS (NM_001038493) -169 NM_001038493 1745 Hs.407015 NM_178120 ENSG00000144355 DLX1 - distal-less homeobox 1 protein-coding chr1-687 chr1 246067645 246067855 + 26.7 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 349662 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr12-447 chr12 108838467 108838677 + 26.7 0.000 intron (NM_018984, intron 2 of 14) intron (NM_018984, intron 2 of 14) -1566 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA chr7-314 chr7 104984175 104984385 + 26.7 0.000 non-coding (NR_039981, exon 1 of 1) non-coding (NR_039981, exon 1 of 1) 6885 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr3-305 chr3 8741567 8741777 + 26.7 0.000 intron (NM_001234, intron 1 of 2) intron (NM_001234, intron 1 of 2) 7870 NM_001234 859 Hs.98303 NM_001234 ENSG00000182533 CAV3 LGMD1C|LQT9|MPDT|RMD2|VIP-21|VIP21 caveolin 3 protein-coding chr19-376 chr19 45079134 45079344 + 26.7 0.000 promoter-TSS (NM_001319054) promoter-TSS (NM_001319054) -21 NM_024707 79760 Hs.466919 NM_024707 ENSG00000142252 GEMIN7 SIP3 gem nuclear organelle associated protein 7 protein-coding chr14-185 chr14 68924476 68924686 + 26.7 0.000 intron (NM_001102, intron 2 of 20) L2c|LINE|L2 54721 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr8-62 chr8 30658099 30658309 + 26.7 0.000 promoter-TSS (NM_002095) promoter-TSS (NM_002095) 32 NM_002095 2961 Hs.77100 NM_002095 ENSG00000197265 GTF2E2 FE|TF2E2|TFIIE-B|TTD6 general transcription factor IIE subunit 2 protein-coding chr9-313 chr9 136668874 136669084 + 26.7 0.000 intron (NR_045110, intron 4 of 9) intron (NR_045110, intron 4 of 9) -1623 NR_029695 406913 NR_029695 ENSG00000199161 MIR126 MIRN126|miRNA126|mir-126 microRNA 126 ncRNA chr19-449 chr19 1897663 1897873 + 26.7 0.000 Intergenic Intergenic -7631 NM_079834 113178 Hs.144980 NM_079834 ENSG00000227500 SCAMP4 SCAMP-4 secretory carrier membrane protein 4 protein-coding chr10-455 chr10 44981371 44981581 + 26.7 0.000 intron (NM_032023, intron 3 of 10) L1MB1|LINE|L1 -2667 NM_007021 11067 Hs.93675 NM_007021 ENSG00000165507 DEPP1 C10orf10|DEPP|FIG|Fseg DEPP1 autophagy regulator protein-coding chr9-596 chr9 98811009 98811219 + 26.7 0.000 intron (NM_024642, intron 1 of 9) intron (NM_024642, intron 1 of 9) 3444 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chr13-17 chr13 27171864 27172074 + 26.7 0.000 promoter-TSS (NR_046548) promoter-TSS (NR_046548) -158 NM_182488 219333 Hs.42400 NM_182488 ENSG00000152484 USP12 UBH1|USP12L1 ubiquitin specific peptidase 12 protein-coding chr12-463 chr12 106030408 106030618 + 26.7 0.000 Intergenic Intergenic 109520 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr19-720 chr19 782552 782762 + 26.7 0.000 Intergenic Intergenic -14795 NM_031990 5725 Hs.172550 NM_002819 ENSG00000011304 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding chr5-416 chr5 144484307 144484517 + 26.7 0.000 3' UTR (NM_020768, exon 4 of 4) 3' UTR (NM_020768, exon 4 of 4) 279021 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr21-104 chr21 46661424 46661634 + 26.7 0.000 TTS (NM_001242866) TTS (NM_001242866) 25855 NM_206962 3275 Hs.154163 NM_001535 ENSG00000160310 PRMT2 HRMT1L1 protein arginine methyltransferase 2 protein-coding chr2-694 chr2 189762537 189762747 + 26.7 0.000 promoter-TSS (NR_102429) promoter-TSS (NR_102429) -138 NR_102429 101409258 Hs.738558 NR_102429 OSGEPL1-AS1 - OSGEPL1 antisense RNA 1 ncRNA chr10-378 chr10 58268963 58269173 + 26.7 0.000 promoter-TSS (NM_018464) promoter-TSS (NM_018464) -94 NM_018464 55847 Hs.370102 NM_018464 ENSG00000122873 CISD1 C10orf70|MDS029|ZCD1|mitoNEET CDGSH iron sulfur domain 1 protein-coding chr16-312 chr16 30658732 30658942 + 26.7 0.000 5' UTR (NM_001105079, exon 1 of 18) 5' UTR (NM_001105079, exon 1 of 18) 406 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding chr1-473 chr1 2330850 2331060 + 26.7 0.000 intron (NM_024848, intron 12 of 13) intron (NM_024848, intron 12 of 13) 21706 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr5-448 chr5 33649877 33650087 + 26.7 0.000 intron (NM_001324512, intron 7 of 21) intron (NM_001324512, intron 7 of 21) 209206 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr1-570 chr1 117605809 117606019 + 26.7 0.000 promoter-TSS (NR_121626) promoter-TSS (NR_121626) -134 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr15-292 chr15 48096883 48097093 + 26.7 0.000 Intergenic MamRTE1|LINE|RTE-BovB -24002 NM_205850 283652 Hs.710240 NM_205850 ENSG00000188467 SLC24A5 JSX|NCKX5|OCA6|SHEP4 solute carrier family 24 member 5 protein-coding chr1-426 chr1 29182033 29182243 + 26.7 0.000 promoter-TSS (NM_005626) promoter-TSS (NM_005626) -238 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding chr12-323 chr12 102061957 102062167 + 26.7 0.000 promoter-TSS (NM_001301107) promoter-TSS (NM_001301107) 62 NM_001301107 51019 Hs.405692 NM_016053 ENSG00000120860 WASHC3 CCDC53|CGI-116 WASH complex subunit 3 protein-coding chr22-201 chr22 21045589 21045799 + 26.7 0.000 promoter-TSS (NR_027006) promoter-TSS (NR_027006) -252 NR_027006 400891 Hs.291198 NM_001013675 ENSG00000187905 LRRC74B - leucine rich repeat containing 74B protein-coding chr11-451 chr11 62771369 62771579 + 26.7 0.000 promoter-TSS (NM_006473) promoter-TSS (NM_006473) 78 NM_006473 10629 Hs.714400 NM_006473 ENSG00000162227 TAF6L PAF65A TATA-box binding protein associated factor 6 like protein-coding chr1-925 chr1 112904220 112904430 + 26.6 0.000 Intergenic LTR8|LTR|ERV1 -19025 NR_002796 246182 Hs.647691 NR_002796 AKR7A2P1 AFARP1 aldo-keto reductase family 7 member A2 pseudogene 1 pseudo chr2-451 chr2 58923989 58924199 + 26.6 0.000 intron (NR_033873, intron 4 of 13) intron (NR_033873, intron 4 of 13) -293614 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr1-592 chr1 185045399 185045609 + 26.6 0.000 promoter-TSS (NM_007212) promoter-TSS (NM_007212) -54 NM_007212 6045 Hs.591490 NM_007212 ENSG00000121481 RNF2 BAP-1|BAP1|DING|HIPI3|RING1B|RING2 ring finger protein 2 protein-coding chr14-282 chr14 102187143 102187353 + 26.6 0.000 intron (NM_001353659, intron 1 of 1) intron (NM_001353659, intron 1 of 1) 47351 NM_001353661 91833 Hs.36859 NM_144574 ENSG00000140153 WDR20 DMR WD repeat domain 20 protein-coding chr2-665 chr2 149376131 149376341 + 26.6 0.000 intron (NM_194317, intron 1 of 4) intron (NM_194317, intron 1 of 4) 45649 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr16-370 chr16 87464906 87465116 + 26.6 0.000 intron (NM_015144, intron 1 of 12) intron (NM_015144, intron 1 of 12) 26843 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr9-363 chr9 136807669 136807879 + 26.6 0.000 promoter-TSS (NM_024718) promoter-TSS (NM_024718) -174 NM_001173989 55684 Hs.370555 NM_017995 ENSG00000196642 RABL6 C9orf86|PARF|RBEL1|pp8875 RAB, member RAS oncogene family like 6 protein-coding chr20-118 chr20 32358017 32358227 + 26.6 0.000 promoter-TSS (NM_001363734) promoter-TSS (NM_001363734) -222 NM_001164603 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chrX-129 chrX 80809944 80810154 + 26.6 0.000 promoter-TSS (NM_153252) promoter-TSS (NM_153252) -172 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr5-628 chr5 142830985 142831195 + 26.6 0.000 intron (NM_001349547, intron 1 of 21) MIRb|SINE|MIR 37820 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr11-493 chr11 32707176 32707386 + 26.6 0.000 intron (NM_001008391, intron 3 of 17) MER110-int|LTR|ERV1 87377 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr7-303 chr7 94658330 94658540 + 26.6 0.000 intron (NM_001172437, intron 1 of 1) intron (NM_001172437, intron 1 of 1) 2065 NM_001184962 23089 Hs.147492 NM_015068 ENSG00000242265 PEG10 EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1 paternally expressed 10 protein-coding chrX-23 chrX 154516237 154516447 + 26.6 0.000 promoter-TSS (NM_001171134) promoter-TSS (NM_001171134) -100 NM_001171134 60343 Hs.289108 NM_021806 ENSG00000071889 FAM3A 2.19|DLD|DXS560S|XAP-7 family with sequence similarity 3 member A protein-coding chr18-107 chr18 24139025 24139235 + 26.6 0.000 promoter-TSS (NM_153768) promoter-TSS (NM_153768) 68 NM_153770 26256 Hs.511983 NM_012189 ENSG00000154040 CABYR CABYRa|CABYRc|CABYRc/d|CABYRe|CBP86|CT88|FSP-2|FSP2 calcium binding tyrosine phosphorylation regulated protein-coding chr9-869 chr9 79611110 79611320 + 26.6 0.000 intron (NM_001282760, intron 5 of 20) intron (NM_001282760, intron 5 of 20) 38038 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr12-137 chr12 76763992 76764202 + 26.6 0.000 promoter-TSS (NM_001359626) promoter-TSS (NM_001359626) 23 NM_015336 23390 Hs.4014 NM_015336 ENSG00000186908 ZDHHC17 DHHC-17|HIP14|HIP3|HSPC294|HYPH zinc finger DHHC-type containing 17 protein-coding chr22-507 chr22 45680955 45681165 + 26.6 0.000 intron (NM_001167621, intron 1 of 10) L2a|LINE|L2 9226 NM_013236 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr17-1519 chr17 62675361 62675571 + 26.6 0.000 intron (NM_006039, intron 9 of 29) MLT1M|LTR|ERVL-MaLR -30740 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr5-643 chr5 134240736 134240946 + 26.6 0.000 Intergenic Intergenic -14768 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr3-681 chr3 143135279 143135489 + 26.6 0.000 Intergenic Intergenic 15613 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr16-420 chr16 57266160 57266370 + 26.6 0.000 intron (NM_015993, intron 1 of 3) intron (NM_015993, intron 1 of 3) 18407 NM_015993 51090 Hs.632215 NM_015993 ENSG00000102934 PLLP PMLP|TM4SF11 plasmolipin protein-coding chr12-332 chr12 91779030 91779240 + 26.6 0.000 Intergenic Intergenic 362578 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr9-540 chr9 133967148 133967358 + 26.6 0.000 intron (NM_001134398, intron 1 of 29) L1MA4|LINE|L1 25071 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr10-368 chr10 98415051 98415261 + 26.6 0.000 promoter-TSS (NM_032709) promoter-TSS (NM_032709) 26 NM_032709 84795 Hs.238303 NM_032709 ENSG00000119943 PYROXD2 C10orf33|FP3420|YUEF pyridine nucleotide-disulphide oxidoreductase domain 2 protein-coding chr11-712 chr11 6604381 6604591 + 26.6 0.000 promoter-TSS (NM_015324) promoter-TSS (NM_015324) 712 NM_001014795 3611 Hs.706355 NM_004517 ENSG00000166333 ILK HEL-S-28|ILK-1|ILK-2|P59|p59ILK integrin linked kinase protein-coding chr3-224 chr3 190513793 190514003 + 26.6 0.000 promoter-TSS (NM_001167930) promoter-TSS (NM_001167930) -187 NR_157353 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr15-203 chr15 78072592 78072802 + 26.6 0.000 intron (NM_144572, intron 1 of 12) intron (NM_144572, intron 1 of 12) 4955 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr19-900 chr19 42088524 42088734 + 26.6 0.000 3' UTR (NM_001207025, exon 14 of 14) 3' UTR (NM_001207025, exon 14 of 14) 12463 NM_022752 64763 Hs.13323 NM_022752 ENSG00000105732 ZNF574 FP972 zinc finger protein 574 protein-coding chr11-275 chr11 18013008 18013218 + 26.6 0.000 promoter-TSS (NR_104041) promoter-TSS (NR_104041) 49 NR_104041 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr9-421 chr9 112379844 112380054 + 26.6 0.000 promoter-TSS (NM_032303) promoter-TSS (NM_032303) 40 NM_001195822 84263 Hs.59486 NM_032303 ENSG00000119471 HSDL2 C9orf99|SDR13C1 hydroxysteroid dehydrogenase like 2 protein-coding chr9-355 chr9 5583087 5583297 + 26.6 0.000 Intergenic Intergenic -45915 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr8-689 chr8 127340045 127340255 + 26.6 0.000 intron (NR_117099, intron 3 of 3) L2a|LINE|L2 -60249 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA chr15-539 chr15 78482424 78482634 + 26.6 0.000 intron (NM_001354994, intron 10 of 21) LTR41|LTR|ERVL -25035 NM_001083612 123688 Hs.307962 NM_001013619 ENSG00000188266 HYKK AGPHD1 hydroxylysine kinase protein-coding chr5-341 chr5 149404882 149405092 + 26.6 0.000 promoter-TSS (NM_001317987) promoter-TSS (NM_001317987) -785 NM_001317987 27190 Hs.156979 NM_014443 ENSG00000127743 IL17B IL-17B|IL-20|NIRF|ZCYTO7 interleukin 17B protein-coding chr17-830 chr17 63349676 63349886 + 26.6 0.000 intron (NM_025185, intron 11 of 25) intron (NM_025185, intron 11 of 25) 90486 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr13-227 chr13 64675380 64675590 + 26.6 0.000 Intergenic LTR40a|LTR|ERVL -599474 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr2-488 chr2 9801823 9802033 + 26.6 0.000 Intergenic Intergenic -41514 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr3-650 chr3 27311554 27311764 + 26.6 0.000 intron (NM_152534, intron 9 of 38) intron (NM_152534, intron 9 of 38) 57724 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr16-565 chr16 86590648 86590858 + 26.6 0.000 Intergenic MIR|SINE|MIR 12244 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr8-196 chr8 94553416 94553626 + 26.6 0.000 promoter-TSS (NM_183009) promoter-TSS (NM_183009) -3 NM_183009 25962 Hs.202238 NM_015496 ENSG00000164944 VIRMA KIAA1429|MSTP054|fSAP121 vir like m6A methyltransferase associated protein-coding chr5-340 chr5 132490791 132491001 + 26.6 0.000 promoter-TSS (NR_149069) promoter-TSS (NR_149069) -123 NR_149069 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr22-189 chr22 31399447 31399657 + 26.6 0.000 promoter-TSS (NM_004147) promoter-TSS (NM_004147) -52 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chr3-315 chr3 186567157 186567367 + 26.6 0.000 promoter-TSS (NM_018138) promoter-TSS (NM_018138) 77 NM_018138 55171 Hs.518469 NM_018138 ENSG00000113838 TBCCD1 - TBCC domain containing 1 protein-coding chr6-132 chr6 158518396 158518606 + 26.6 0.000 Intergenic Intergenic -17935 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr9-170 chr9 5628876 5629086 + 26.6 0.000 promoter-TSS (NM_020829) promoter-TSS (NM_020829) -126 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr8-341 chr8 140944290 140944500 + 26.6 0.000 intron (NM_001352699, intron 1 of 35) intron (NM_001352699, intron 1 of 35) 56609 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr2-667 chr2 186575361 186575571 + 26.6 0.000 Intergenic Intergenic -14590 NM_001145000 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr11-1190 chr11 83013403 83013613 + 26.6 0.000 intron (NM_001286060, intron 1 of 4) L2c|LINE|L2 20766 NM_001286059 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr17-430 chr17 42577603 42577813 + 26.6 0.000 promoter-TSS (NR_045671) promoter-TSS (NR_045671) 8 NR_045671 29893 Hs.383019 NM_013290 ENSG00000131470 PSMC3IP GT198|HOP2|HUMGT198A|ODG3|TBPIP PSMC3 interacting protein protein-coding chrX-59 chrX 149938411 149938621 + 26.6 0.000 promoter-TSS (NM_001013845) promoter-TSS (NM_001013845) -25 NM_001013845 541578 Hs.458216 NM_001013845 ENSG00000197021 CXorf40B - chromosome X open reading frame 40B protein-coding chr1-1067 chr1 221117625 221117835 + 26.6 0.000 Intergenic Intergenic 218566 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr6-459 chr6 159249113 159249323 + 26.6 0.000 intron (NM_032532, intron 16 of 22) intron (NM_032532, intron 16 of 22) -79211 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA chr8-97 chr8 144528928 144529138 + 26.6 0.000 promoter-TSS (NM_001001795) promoter-TSS (NM_001001795) 78 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr4-336 chr4 142886729 142886939 + 26.6 0.000 Intergenic Intergenic -40299 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr2-668 chr2 188199711 188199921 + 26.6 0.000 intron (NR_126396, intron 1 of 2) intron (NR_126396, intron 1 of 2) 87875 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr7-605 chr7 13920174 13920384 + 26.6 0.000 intron (NM_001370555, intron 8 of 12) intron (NM_001370555, intron 8 of 12) 66235 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr18-115 chr18 11136362 11136572 + 26.6 0.000 intron (NM_022068, intron 1 of 51) intron (NM_022068, intron 1 of 51) 12295 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr9-512 chr9 25917658 25917868 + 26.6 0.000 Intergenic Intergenic 137707 NR_121604 101929582 Hs.140547 NR_121604 ENSG00000236306 LINC01241 - long intergenic non-protein coding RNA 1241 ncRNA chr21-59 chr21 45471187 45471397 + 26.6 0.000 intron (NM_130445, intron 3 of 42) intron (NM_130445, intron 3 of 42) -6974 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr1-903 chr1 225746844 225747054 + 26.6 0.000 Intergenic Intergenic -30864 NM_003133 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding chr3-317 chr3 28348520 28348730 + 26.6 0.000 promoter-TSS (NR_136708) promoter-TSS (NR_136708) -96 NM_001040432 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding chr3-647 chr3 187281296 187281506 + 26.6 0.000 intron (NR_033519, intron 1 of 9) intron (NR_033519, intron 1 of 9) -9871 NR_135551 101929130 NR_135551 ENSG00000283175 LOC101929130 - uncharacterized LOC101929130 ncRNA chr3-827 chr3 142645507 142645717 + 26.6 0.000 intron (NM_002670, intron 1 of 15) intron (NM_002670, intron 1 of 15) -11285 NM_001172312 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr5-472 chr5 125559350 125559560 + 26.6 0.000 intron (NR_109887, intron 3 of 3) intron (NR_109887, intron 3 of 3) 66194 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr5-376 chr5 134738987 134739197 + 26.6 0.000 intron (NM_001745, intron 1 of 3) intron (NM_001745, intron 1 of 3) 544 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr12-253 chr12 68746127 68746337 + 26.6 0.000 promoter-TSS (NM_001354997) promoter-TSS (NM_001354997) 56 NM_001354998 55508 Hs.506011 NM_018656 ENSG00000175782 SLC35E3 BLOV1 solute carrier family 35 member E3 protein-coding chr9-461 chr9 132647448 132647658 + 26.6 0.000 intron (NR_136309, intron 11 of 18) intron (NR_136309, intron 11 of 18) 15773 NM_001322343 64794 Hs.660767 NM_022779 ENSG00000125485 DDX31 PPP1R25 DEAD-box helicase 31 protein-coding chr2-568 chr2 148509444 148509654 + 26.6 0.000 intron (NM_018328, intron 13 of 14) intron (NM_018328, intron 13 of 14) -135202 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr2-515 chr2 120313118 120313328 + 26.5 0.000 Intergenic Intergenic -32913 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr18-123 chr18 23719818 23720028 + 26.5 0.000 intron (NM_001127717, intron 2 of 73) intron (NM_001127717, intron 2 of 73) 30470 NM_001127717 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr10-656 chr10 104110232 104110442 + 26.5 0.000 Intergenic Intergenic -11721 NM_145247 119392 Hs.93667 NM_145247 ENSG00000156384 SFR1 C10orf78|MEI5|MEIR5|bA373N18.1 SWI5 dependent homologous recombination repair protein 1 protein-coding chr13-190 chr13 99353754 99353964 + 26.5 0.000 intron (NR_026644, intron 7 of 8) intron (NR_026644, intron 7 of 8) -2272 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr11-1198 chr11 121810392 121810602 + 26.5 0.000 Intergenic Intergenic 289347 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr1-510 chr1 150813156 150813366 + 26.5 0.000 exon (NM_001350226, exon 21 of 22) exon (NM_001350226, exon 21 of 22) -5001 NM_000396 1513 Hs.632466 NM_000396 ENSG00000143387 CTSK CTS02|CTSO|CTSO1|CTSO2|PKND|PYCD cathepsin K protein-coding chr4-55 chr4 185471308 185471518 + 26.5 0.000 promoter-TSS (NR_133944) promoter-TSS (NR_133944) -18 NR_133944 105377590 Hs.563183 NR_133944 ENSG00000249679 LOC105377590 - uncharacterized LOC105377590 ncRNA chr6-310 chr6 7172719 7172929 + 26.5 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 64863 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr3-430 chr3 65439720 65439930 + 26.5 0.000 intron (NM_001365904, intron 9 of 24) intron (NM_001365904, intron 9 of 24) -453991 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr3-533 chr3 27552784 27552994 + 26.5 0.000 Intergenic Intergenic -68505 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr1-1819 chr1 219676341 219676551 + 26.5 0.000 Intergenic Intergenic -63301 NM_001355457 643136 Hs.647764 NM_001085394 ENSG00000215817 ZC3H11B ZC3HDC11B zinc finger CCCH-type containing 11B protein-coding chr18-257 chr18 49691183 49691393 + 26.5 0.000 Intergenic Intergenic 122245 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr19-594 chr19 45092830 45093040 + 26.5 0.000 promoter-TSS (NM_019121) promoter-TSS (NM_019121) -244 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr6-402 chr6 113281120 113281330 + 26.5 0.000 Intergenic Intergenic 152222 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr5-507 chr5 61277179 61277389 + 26.5 0.000 Intergenic Intergenic -12355 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr10-459 chr10 77416444 77416654 + 26.5 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 65677 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr20-385 chr20 50913861 50914071 + 26.5 0.000 intron (NM_001347511, intron 1 of 4) intron (NM_001347511, intron 1 of 4) -4175 NM_001282532 23394 Hs.293736 NM_015339 ENSG00000101126 ADNP ADNP1|HVDAS|MRD28 activity dependent neuroprotector homeobox protein-coding chr19-677 chr19 35673348 35673558 + 26.5 0.000 promoter-TSS (NR_046420) promoter-TSS (NR_046420) -162 NR_046420 100862728 Hs.569952 NR_046420 ENSG00000226510 UPK1A-AS1 - UPK1A antisense RNA 1 ncRNA chr18-145 chr18 28584861 28585071 + 26.5 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -407836 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr9-472 chr9 111356834 111357044 + 26.5 0.000 Intergenic L1MEb|LINE|L1 -26715 NM_205859 26248 Hs.381312 NM_205859 ENSG00000171133 OR2K2 HSHTPCRH06|HTPCRH06|OR2AN1P|OR2AR1P olfactory receptor family 2 subfamily K member 2 protein-coding chr2-639 chr2 24827678 24827888 + 26.5 0.000 intron (NM_001320613, intron 14 of 21) intron (NM_001320613, intron 14 of 21) 34358 NR_136183 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr20-218 chr20 63216180 63216390 + 26.5 0.000 promoter-TSS (NM_017798) promoter-TSS (NM_017798) -154 NM_017798 54915 Hs.744852 NM_017798 ENSG00000149658 YTHDF1 C20orf21 YTH N6-methyladenosine RNA binding protein 1 protein-coding chr4-382 chr4 176270719 176270929 + 26.5 0.000 Intergenic Intergenic -1602 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chr8-441 chr8 144622422 144622632 + 26.5 0.000 intron (NM_001308208, intron 1 of 10) intron (NM_001308208, intron 1 of 10) -9024 NM_001308207 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr7-734 chr7 54904199 54904409 + 26.5 0.000 Intergenic Intergenic -114713 NM_201284 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr14-181 chr14 105275655 105275865 + 26.5 0.000 intron (NM_001242788, intron 1 of 16) MLT1A0|LTR|ERVL-MaLR -25014 NM_001243127 23241 Hs.525626 NM_015197 ENSG00000179364 PACS2 EIEE66|PACS-2|PACS1L phosphofurin acidic cluster sorting protein 2 protein-coding chr10-525 chr10 13839671 13839881 + 26.5 0.000 intron (NM_001318336, intron 2 of 23) AmnSINE1|SINE|5S-Deu-L2 132120 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr17-706 chr17 42364011 42364221 + 26.5 0.000 intron (NM_213662, intron 1 of 23) intron (NM_213662, intron 1 of 23) 24326 NM_001369518 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr5-399 chr5 96823987 96824197 + 26.5 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -9947 NM_001198541 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr11-832 chr11 72471289 72471499 + 26.5 0.000 Intergenic LTR16C|LTR|ERVL -36710 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr10-151 chr10 70170527 70170737 + 26.5 0.000 promoter-TSS (NM_001142648) promoter-TSS (NM_001142648) -118 NM_001142648 56681 Hs.499960 NM_020150 ENSG00000079332 SAR1A SAR1|SARA1|Sara|masra2 secretion associated Ras related GTPase 1A protein-coding chr17-558 chr17 17706591 17706801 + 26.5 0.000 intron (NM_030665, intron 1 of 5) intron (NM_030665, intron 1 of 5) 25238 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr8-463 chr8 13574717 13574927 + 26.5 0.000 intron (NM_001348082, intron 1 of 16) intron (NM_001348082, intron 1 of 16) 7953 NM_001007090 157773 Hs.104941 NM_001007090 ENSG00000164743 C8orf48 - chromosome 8 open reading frame 48 protein-coding chr16-661 chr16 11560675 11560885 + 26.5 0.000 intron (NR_024320, intron 1 of 3) intron (NR_024320, intron 1 of 3) 25593 NM_004862 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr2-970 chr2 235766377 235766587 + 26.5 0.000 intron (NM_001037131, intron 6 of 17) intron (NM_001037131, intron 6 of 17) -248561 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr9-228 chr9 128128280 128128490 + 26.5 0.000 promoter-TSS (NM_025072) promoter-TSS (NM_025072) 77 NM_198938 80142 Hs.495219 NM_025072 ENSG00000148334 PTGES2 C9orf15|GBF-1|GBF1|PGES2|mPGES-2 prostaglandin E synthase 2 protein-coding chr17-424 chr17 81703252 81703462 + 26.5 0.000 promoter-TSS (NM_002949) promoter-TSS (NM_002949) -10 NM_002949 6182 Hs.109059 NM_002949 ENSG00000262814 MRPL12 5c5-2|L12mt|MRP-L31/34|MRPL7|MRPL7/L12|RPML12 mitochondrial ribosomal protein L12 protein-coding chr1-628 chr1 32447990 32448200 + 26.5 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 -16977 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr4-258 chr4 7557553 7557763 + 26.5 0.000 intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) 97630 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr16-597 chr16 24748226 24748436 + 26.5 0.000 intron (NM_014494, intron 2 of 24) intron (NM_014494, intron 2 of 24) 18680 NM_001330520 27327 Hs.655057 NM_014494 ENSG00000090905 TNRC6A CAGH26|FAME6|GW1|GW182|TNRC6 trinucleotide repeat containing adaptor 6A protein-coding chr13-192 chr13 47033301 47033511 + 26.5 0.000 Intergenic L2|LINE|L2 -136330 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr11-852 chr11 35185779 35185989 + 26.5 0.000 intron (NM_001001389, intron 3 of 16) intron (NM_001001389, intron 3 of 16) 22934 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr17-359 chr17 75557065 75557275 + 26.5 0.000 intron (NM_001015002, intron 3 of 9) AluJo|SINE|Alu -30888 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr2-617 chr2 35298644 35298854 + 26.5 0.000 Intergenic Intergenic -172656 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr14-405 chr14 69057606 69057816 + 26.5 0.000 intron (NM_003861, intron 8 of 8) intron (NM_003861, intron 8 of 8) 78029 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr21-37 chr21 37072690 37072900 + 26.5 0.000 promoter-TSS (NM_001353937) promoter-TSS (NM_001353937) 8 NM_153681 51227 Hs.656565 NM_016430 ENSG00000185808 PIGP DCRC|DCRC-S|DSCR5|DSRC|EIEE55|PIG-P phosphatidylinositol glycan anchor biosynthesis class P protein-coding chr3-566 chr3 48087308 48087518 + 26.5 0.000 intron (NM_002375, intron 1 of 18) intron (NM_002375, intron 1 of 18) 1435 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr16-328 chr16 75421014 75421224 + 26.5 0.000 intron (NM_006324, intron 1 of 6) MER61A|LTR|ERV1 12384 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr7-467 chr7 74254399 74254609 + 26.5 0.000 promoter-TSS (NM_002914) promoter-TSS (NM_002914) -46 NM_001278791 5982 Hs.647062 NM_002914 ENSG00000049541 RFC2 RFC40 replication factor C subunit 2 protein-coding chr6-439 chr6 157764679 157764889 + 26.5 0.000 Intergenic Intergenic -58462 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr12-886 chr12 93886598 93886808 + 26.5 0.000 intron (NR_135147, intron 3 of 3) intron (NR_135147, intron 3 of 3) 56903 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr9-1096 chr9 121048705 121048915 + 26.5 0.000 intron (NM_001317163, intron 1 of 40) L2a|LINE|L2 1465 NM_001317164 727 Hs.494997 NM_001735 ENSG00000106804 C5 C5D|C5a|C5b|CPAMD4|ECLZB complement C5 protein-coding chrX-69 chrX 123963050 123963260 + 26.5 0.000 intron (NM_006603, intron 1 of 32) intron (NM_006603, intron 1 of 32) 1449 NM_001042751 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr1-732 chr1 246507264 246507474 + 26.5 0.000 promoter-TSS (NM_001167740) promoter-TSS (NM_001167740) -90 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr9-532 chr9 95098720 95098930 + 26.5 0.000 TTS (NM_000136) TTS (NM_000136) -12731 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr1-908 chr1 2300016 2300226 + 26.5 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 52540 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr13-235 chr13 26062075 26062285 + 26.5 0.000 Intergenic Intergenic -2658 NR_146971 107984009 NR_146971 LINC00415 - long intergenic non-protein coding RNA 415 ncRNA chr16-716 chr16 23670271 23670481 + 26.5 0.000 non-coding (NR_037573, exon 7 of 7) non-coding (NR_037573, exon 7 of 7) -8513 NM_005030 5347 Hs.592049 NM_005030 ENSG00000166851 PLK1 PLK|STPK13 polo like kinase 1 protein-coding chr3-270 chr3 61251397 61251607 + 26.5 0.000 promoter-TSS (NM_001166243) promoter-TSS (NM_001166243) -41 NR_148921 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr7-153 chr7 152463781 152463991 + 26.5 0.000 promoter-TSS (NR_027387) promoter-TSS (NR_027387) -238 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA chr2-717 chr2 159286827 159287037 + 26.5 0.000 promoter-TSS (NM_001330274) promoter-TSS (NM_001330274) -229 NM_001330276 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr19-649 chr19 31378288 31378498 + 26.5 0.000 Intergenic Intergenic -28957 NR_138034 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr11-719 chr11 47204560 47204770 + 26.5 0.000 Intergenic Intergenic -10277 NM_000107 1643 Hs.700338 NM_000107 ENSG00000134574 DDB2 DDBB|UV-DDB2|XPE damage specific DNA binding protein 2 protein-coding chr11-563 chr11 117218071 117218281 + 26.5 0.000 intron (NM_004716, intron 12 of 16) intron (NM_004716, intron 12 of 16) 13897 NM_004716 9159 Hs.648612 NM_004716 ENSG00000160613 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding chr10-327 chr10 97596592 97596802 + 26.5 0.000 intron (NM_001134670, intron 1 of 2) intron (NM_001134670, intron 1 of 2) 6976 NM_001009997 414157 Hs.662302 NM_001009997 ENSG00000203942 C10orf62 bA548K23.1 chromosome 10 open reading frame 62 protein-coding chr1-1389 chr1 154446373 154446583 + 26.5 0.000 intron (NM_000565, intron 6 of 9) intron (NM_000565, intron 6 of 9) -39914 NR_147855 101928101 Hs.617089 NR_147855 ENSG00000228013 IL6R-AS1 - IL6R antisense RNA 1 ncRNA chr14-345 chr14 59028551 59028761 + 26.5 0.000 Intergenic Intergenic -160011 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr1-1072 chr1 240107210 240107420 + 26.5 0.000 intron (NM_020066, intron 1 of 17) L3|LINE|CR1 15432 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr7-656 chr7 121313447 121313657 + 26.5 0.000 Intergenic Intergenic -11815 NM_016087 51384 Hs.272375 NM_016087 ENSG00000002745 WNT16 - Wnt family member 16 protein-coding chr4-237 chr4 10074776 10074986 + 26.5 0.000 3' UTR (NM_005112, exon 12 of 12) 3' UTR (NM_005112, exon 12 of 12) 3811 NR_036090 100423011 NR_036090 ENSG00000264931 MIR3138 mir-3138 microRNA 3138 ncRNA chr4-404 chr4 80309691 80309901 + 26.5 0.000 Intergenic Intergenic -25924 NM_001206997 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr6-351 chr6 1325706 1325916 + 26.5 0.000 Intergenic MamTip2|DNA|hAT-Tip100 13713 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr5-269 chr5 54310722 54310932 + 26.4 0.000 promoter-TSS (NM_019087) promoter-TSS (NM_019087) -254 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr11-453 chr11 65872197 65872407 + 26.4 0.000 non-coding (NR_037718, exon 2 of 12) non-coding (NR_037718, exon 2 of 12) 498 NM_016938 30008 Hs.731454 NM_016938 ENSG00000172638 EFEMP2 ARCL1B|FBLN4|MBP1|UPH1 EGF containing fibulin extracellular matrix protein 2 protein-coding chr1-1429 chr1 43435816 43436026 + 26.4 0.000 intron (NM_015284, intron 41 of 70) intron (NM_015284, intron 41 of 70) -12618 NR_106793 102465440 NR_106793 ENSG00000274975 MIR6735 hsa-mir-6735 microRNA 6735 ncRNA chr1-658 chr1 246428685 246428895 + 26.4 0.000 intron (NM_001167740, intron 1 of 11) MIR|SINE|MIR -11378 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr15-195 chr15 101277265 101277475 + 26.4 0.000 exon (NM_203472, exon 1 of 7) exon (NM_203472, exon 1 of 7) 115 NM_203472 55829 Hs.32148 NM_018445 ENSG00000131871 SELENOS AD-015|ADO15|SBBI8|SELS|SEPS1|VIMP selenoprotein S protein-coding chr8-174 chr8 144078563 144078773 + 26.4 0.000 promoter-TSS (NM_019037) promoter-TSS (NM_019037) -4 NM_019037 54512 Hs.632041 NM_019037 ENSG00000178896 EXOSC4 RRP41|RRP41A|Rrp41p|SKI6|Ski6p|hRrp41p|p12A exosome component 4 protein-coding chr13-135 chr13 110301728 110301938 + 26.4 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 5324 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr1-884 chr1 24909552 24909762 + 26.4 0.000 intron (NM_001320672, intron 5 of 6) intron (NM_001320672, intron 5 of 6) 9759 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr4-200 chr4 105474109 105474319 + 26.4 0.000 promoter-TSS (NM_176867) promoter-TSS (NM_176867) -144 NM_006903 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chr22-338 chr22 24157040 24157250 + 26.4 0.000 intron (NM_012295, intron 29 of 36) intron (NM_012295, intron 29 of 36) -24342 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr2-722 chr2 229363511 229363721 + 26.4 0.000 intron (NM_139072, intron 12 of 12) intron (NM_139072, intron 12 of 12) -92329 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr12-271 chr12 52050841 52051051 + 26.4 0.000 promoter-TSS (NM_173157) promoter-TSS (NM_173157) -456 NM_002135 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr19-490 chr19 12092119 12092329 + 26.4 0.000 promoter-TSS (NM_001348163) promoter-TSS (NM_001348163) -73 NM_001348165 388507 Hs.127473 NM_001004314 ZNF788P ZNF788 zinc finger family member 788, pseudogene protein-coding chr8-652 chr8 118635154 118635364 + 26.4 0.000 intron (NR_038210, intron 2 of 4) intron (NR_038210, intron 2 of 4) -13296 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr5-248 chr5 142600673 142600883 + 26.4 0.000 exon (NM_001354955, exon 4 of 5) exon (NM_001354955, exon 4 of 5) 20556 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr17-506 chr17 6640995 6641205 + 26.4 0.000 promoter-TSS (NR_147086) promoter-TSS (NR_147086) 40 NM_032731 84817 Hs.408236 NM_032731 ENSG00000129235 TXNDC17 TRP14|TXNL5 thioredoxin domain containing 17 protein-coding chr13-69 chr13 99501304 99501514 + 26.4 0.000 promoter-TSS (NM_004800) promoter-TSS (NM_004800) -63 NM_004800 9375 Hs.607896 NM_004800 ENSG00000125304 TM9SF2 P76 transmembrane 9 superfamily member 2 protein-coding chr1-624 chr1 2300953 2301163 + 26.4 0.000 intron (NM_003036, intron 1 of 6) CpG 51603 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr7-409 chr7 44791642 44791852 + 26.4 0.000 Intergenic Intergenic -4934 NM_021130 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr20-396 chr20 37096034 37096244 + 26.4 0.000 promoter-TSS (NM_183404) promoter-TSS (NM_183404) -142 NM_001323281 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr17-455 chr17 42288331 42288541 + 26.4 0.000 5' UTR (NM_003152, exon 2 of 20) 5' UTR (NM_003152, exon 2 of 20) 380 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr1-1632 chr1 162539105 162539315 + 26.4 0.000 Intergenic Intergenic -22230 NM_001324117 6675 Hs.492859 NM_003115 ENSG00000117143 UAP1 AGX|AGX1|AGX2|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding chr3-608 chr3 60579940 60580150 + 26.4 0.000 intron (NM_001320900, intron 5 of 9) intron (NM_001320900, intron 5 of 9) 37825 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr2-178 chr2 130355976 130356186 + 26.4 0.000 promoter-TSS (NM_001142370) promoter-TSS (NM_001142370) 25 NM_014369 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr20-242 chr20 17675183 17675393 + 26.4 0.000 intron (NM_004587, intron 1 of 24) Tigger19b|DNA|TcMar-Tigger 6954 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr17-709 chr17 50426897 50427107 + 26.4 0.000 intron (NM_001288968, intron 2 of 16) intron (NM_001288968, intron 2 of 16) 844 NM_001288969 80221 Hs.288959 NM_025149 ENSG00000167107 ACSF2 ACSMW|AVYV493 acyl-CoA synthetase family member 2 protein-coding chr10-193 chr10 14959477 14959687 + 26.4 0.000 intron (NR_147060, intron 1 of 2) CpG 194 NM_001080836 644890 Hs.257249 NM_001080836 ENSG00000197889 MEIG1 SPATA39|bA2K17.3 meiosis/spermiogenesis associated 1 protein-coding chr10-326 chr10 71766889 71767099 + 26.4 0.000 intron (NM_022153, intron 1 of 6) L2b|LINE|L2 6526 NM_022153 64115 Hs.47382 NM_022153 ENSG00000107738 VSIR B7-H5|B7H5|C10orf54|DD1alpha|Dies1|GI24|PD-1H|PP2135|SISP1|VISTA V-set immunoregulatory receptor protein-coding chr2-332 chr2 152543092 152543302 + 26.4 0.000 intron (NM_052905, intron 3 of 25) intron (NM_052905, intron 3 of 25) 174264 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr17-374 chr17 42020051 42020261 + 26.4 0.000 promoter-TSS (NM_001144928) promoter-TSS (NM_001144928) 66 NM_017595 28511 Hs.632252 NM_017595 ENSG00000168256 NKIRAS2 KBRAS2|kappaB-Ras2 NFKB inhibitor interacting Ras like 2 protein-coding chr4-432 chr4 151806693 151806903 + 26.4 0.000 Intergenic Intergenic -45775 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr9-412 chr9 129103289 129103499 + 26.4 0.000 intron (NM_001346547, intron 3 of 13) intron (NM_001346547, intron 3 of 13) 7399 NM_004003 1384 Hs.12068 NM_000755 ENSG00000095321 CRAT CAT|CAT1|NBIA8 carnitine O-acetyltransferase protein-coding chr10-602 chr10 35079733 35079943 + 26.4 0.000 promoter-TSS (NR_037405) promoter-TSS (NR_037405) -158 NR_037405 100500890 NR_037405 ENSG00000266228 MIR3611 - microRNA 3611 ncRNA chr7-492 chr7 80372539 80372749 + 26.4 0.000 intron (NR_110075, intron 2 of 3) intron (NR_110075, intron 2 of 3) 1795 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chr1-1074 chr1 246785242 246785452 + 26.4 0.000 Intergenic Intergenic -4270 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr7-341 chr7 1883343 1883553 + 26.4 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) -39195 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr1-559 chr1 1906367 1906577 + 26.4 0.000 Intergenic Intergenic -8788 NM_138705 163688 Hs.85902 NM_138705 ENSG00000169885 CALML6 CAGLP calmodulin like 6 protein-coding chr7-658 chr7 130026095 130026305 + 26.4 0.000 exon (NM_001363701, exon 6 of 10) exon (NM_001363701, exon 6 of 10) 25185 NM_001363701 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 HSPC216|NIPA zinc finger C3HC-type containing 1 protein-coding chr6-94 chr6 110815286 110815496 + 26.4 0.000 promoter-TSS (NM_015076) promoter-TSS (NM_015076) 78 NM_015076 23097 Hs.744895 NM_015076 ENSG00000155111 CDK19 CDC2L6|CDK11|bA346C16.3 cyclin dependent kinase 19 protein-coding chr3-142 chr3 44338357 44338567 + 26.4 0.000 promoter-TSS (NM_173826) promoter-TSS (NM_173826) 10 NM_001029839 285343 Hs.55131 NM_173826 ENSG00000179152 TCAIM C3orf23|TOAG-1|TOAG1 T cell activation inhibitor, mitochondrial protein-coding chr16-603 chr16 64892880 64893090 + 26.4 0.000 Intergenic Intergenic 229078 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr5-160 chr5 178130672 178130882 + 26.4 0.000 promoter-TSS (NM_022762) promoter-TSS (NM_022762) -184 NM_001288794 64777 Hs.27222 NM_022762 ENSG00000145916 RMND5B GID2|GID2B required for meiotic nuclear division 5 homolog B protein-coding chr10-895 chr10 103295393 103295603 + 26.4 0.000 Intergenic Intergenic 18360 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr3-486 chr3 127690977 127691187 + 26.4 0.000 3' UTR (NM_001256585, exon 7 of 7) 3' UTR (NM_001256585, exon 7 of 7) 18130 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr17-144 chr17 50866348 50866558 + 26.4 0.000 promoter-TSS (NR_038458) promoter-TSS (NR_038458) -99 NM_001243885 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr13-29 chr13 110874638 110874848 + 26.4 0.000 Intergenic CpG -4435 NR_027701 283487 Hs.245390 NM_178514 ENSG00000255874 LINC00346 C13orf29|NCRNA00346 long intergenic non-protein coding RNA 346 ncRNA chr3-426 chr3 39384309 39384519 + 26.4 0.000 intron (NM_001354798, intron 1 of 5) CpG 1044 NM_017875 54977 Hs.369615 NM_017875 ENSG00000144659 SLC25A38 SIDBA2 solute carrier family 25 member 38 protein-coding chr1-651 chr1 33328122 33328332 + 26.4 0.000 intron (NM_198040, intron 13 of 13) intron (NM_198040, intron 13 of 13) 4265 NR_037400 100500853 NR_037400 ENSG00000284154 MIR3605 mir-3605 microRNA 3605 ncRNA chr15-252 chr15 92930795 92931005 + 26.4 0.000 intron (NM_001042572, intron 5 of 12) intron (NM_001042572, intron 5 of 12) 26501 NR_036136 100422995 NR_036136 ENSG00000284324 MIR3175 mir-3175 microRNA 3175 ncRNA chr1-1403 chr1 227225839 227226049 + 26.4 0.000 intron (NM_001366019, intron 2 of 36) intron (NM_001366019, intron 2 of 36) 92548 NM_001366010 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr16-394 chr16 86397046 86397256 + 26.4 0.000 Intergenic Intergenic -51472 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr2-637 chr2 238974552 238974762 + 26.4 0.000 Intergenic L1MB8|LINE|L1 -48388 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr12-240 chr12 57726008 57726218 + 26.4 0.000 promoter-TSS (NR_027032) promoter-TSS (NR_027032) -127 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA chr12-597 chr12 122400515 122400725 + 26.4 0.000 TTS (NR_045382) TTS (NR_045382) 5078 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chr2-766 chr2 15560484 15560694 + 26.4 0.000 intron (NR_052013, intron 1 of 50) intron (NR_052013, intron 1 of 50) 745 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr9-386 chr9 137482188 137482398 + 26.4 0.000 intron (NM_001098537, intron 21 of 34) L1MC1|LINE|L1 -22959 NM_015537 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr15-116 chr15 64153555 64153765 + 26.4 0.000 exon (NM_024798, exon 5 of 7) exon (NM_024798, exon 5 of 7) 1929 NR_073534 79856 Hs.744250 NM_024798 ENSG00000157734 SNX22 - sorting nexin 22 protein-coding chr6-460 chr6 161434947 161435157 + 26.4 0.000 intron (NM_004562, intron 9 of 11) intron (NM_004562, intron 9 of 11) -35925 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr2-1375 chr2 24304219 24304429 + 26.4 0.000 intron (NM_001348182, intron 8 of 38) intron (NM_001348182, intron 8 of 38) 56212 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr1-1483 chr1 182186489 182186699 + 26.4 0.000 Intergenic Intergenic -124882 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr16-586 chr16 68332318 68332528 + 26.4 0.000 intron (NR_147058, intron 6 of 18) intron (NR_147058, intron 6 of 18) 21309 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr6-362 chr6 144661118 144661328 + 26.4 0.000 intron (NM_007124, intron 50 of 73) intron (NM_007124, intron 50 of 73) 255568 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr10-806 chr10 66349801 66350011 + 26.4 0.000 intron (NM_001127384, intron 12 of 17) intron (NM_001127384, intron 12 of 17) -576130 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr17-783 chr17 80254715 80254925 + 26.4 0.000 Intergenic Intergenic -6032 NM_001256071 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr1-1046 chr1 61097398 61097608 + 26.4 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 14942 NM_005595 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr8-170 chr8 23345299 23345509 + 26.4 0.000 intron (NM_002318, intron 3 of 13) intron (NM_002318, intron 3 of 13) 9196 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr5-480 chr5 179167307 179167517 + 26.4 0.000 intron (NM_014244, intron 5 of 21) CpG 107039 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr3-781 chr3 49813813 49814023 + 26.4 0.000 promoter-TSS (NM_003335) promoter-TSS (NM_003335) 35 NM_003335 7318 Hs.16695 NM_003335 ENSG00000182179 UBA7 D8|UBA1B|UBE1L|UBE2 ubiquitin like modifier activating enzyme 7 protein-coding chr9-291 chr9 37120404 37120614 + 26.4 0.000 promoter-TSS (NM_032226) promoter-TSS (NM_032226) 37 NM_032226 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr19-530 chr19 2540850 2541060 + 26.4 0.000 intron (NM_052847, intron 3 of 4) CpG 64828 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr2-508 chr2 24855683 24855893 + 26.4 0.000 intron (NM_001320613, intron 3 of 21) intron (NM_001320613, intron 3 of 21) 62363 NR_136183 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr17-409 chr17 2043868 2044078 + 26.4 0.000 TTS (NM_001346574) TTS (NM_001346574) 1951 NM_080822 124641 Hs.513856 NM_080822 ENSG00000262664 OVCA2 - OVCA2 serine hydrolase domain containing protein-coding chr10-260 chr10 72691935 72692145 + 26.4 0.000 promoter-TSS (NR_073062) promoter-TSS (NR_073062) -91 NM_138357 90550 Hs.591366 NM_138357 ENSG00000156026 MCU C10orf42|CCDC109A|HsMCU mitochondrial calcium uniporter protein-coding chr8-523 chr8 143904568 143904778 + 26.4 0.000 Intergenic Intergenic -26209 NM_031308 83481 Hs.200412 NM_031308 ENSG00000261150 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding chr22-245 chr22 36252925 36253135 + 26.4 0.000 promoter-TSS (NM_001136540) promoter-TSS (NM_001136540) -41 NM_001136541 8542 Hs.114309 NM_003661 ENSG00000100342 APOL1 APO-L|APOL|APOL-I|FSGS4 apolipoprotein L1 protein-coding chr6-374 chr6 131603030 131603240 + 26.4 0.000 exon (NM_004830, exon 16 of 29) exon (NM_004830, exon 16 of 29) 25107 NM_001270522 9439 Hs.29679 NM_004830 ENSG00000112282 MED23 ARC130|CRSP130|CRSP133|CRSP3|DRIP130|MRT18|SUR-2|SUR2 mediator complex subunit 23 protein-coding chr1-302 chr1 43707323 43707533 + 26.4 0.000 promoter-TSS (NM_001350621) promoter-TSS (NM_001350621) -69 NM_001270466 6487 Hs.597915 NM_006279 ENSG00000126091 ST3GAL3 EIEE15|MRT12|SIAT6|ST3GALII|ST3Gal III|ST3GalIII|ST3N ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding chr2-509 chr2 32063193 32063403 + 26.3 0.000 promoter-TSS (NM_199436) promoter-TSS (NM_199436) -313 NM_001363875 6683 Hs.468091 NM_014946 ENSG00000021574 SPAST ADPSP|FSP2|SPG4 spastin protein-coding chr7-405 chr7 5240364 5240574 + 26.3 0.000 Intergenic Intergenic 26200 NM_001033520 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr3-466 chr3 29057375 29057585 + 26.3 0.000 Intergenic L1PB1|LINE|L1 223459 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr19-923 chr19 2005085 2005295 + 26.3 0.000 intron (NM_017797, intron 1 of 8) L1M5|LINE|L1 10524 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr22-471 chr22 46830447 46830657 + 26.3 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 56625 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr3-556 chr3 156535280 156535490 + 26.3 0.000 intron (NM_172159, intron 13 of 13) intron (NM_172159, intron 13 of 13) 18740 NM_001308205 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr20-235 chr20 57698284 57698494 + 26.3 0.000 intron (NM_199171, intron 1 of 3) intron (NM_199171, intron 1 of 3) -7703 NM_001255976 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr20-315 chr20 19332540 19332750 + 26.3 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -48049 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr2-279 chr2 144332400 144332610 + 26.3 0.000 promoter-TSS (NM_001354362) promoter-TSS (NM_001354362) 29 NM_001354351 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr22-239 chr22 18157347 18157557 + 26.3 0.000 intron (NM_017414, intron 1 of 10) intron (NM_017414, intron 1 of 10) 7282 NM_017414 11274 Hs.38260 NM_017414 ENSG00000184979 USP18 ISG43|PTORCH2|UBP43 ubiquitin specific peptidase 18 protein-coding chr1-1899 chr1 188652647 188652857 + 26.3 0.000 Intergenic Intergenic 1209124 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr2-354 chr2 241355366 241355576 + 26.3 0.000 promoter-TSS (NM_001282983) promoter-TSS (NM_001282983) -814 NM_014808 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr6-448 chr6 39416829 39417039 + 26.3 0.000 intron (NM_001289024, intron 2 of 9) intron (NM_001289024, intron 2 of 9) 14456 NM_001351566 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr19-515 chr19 4988759 4988969 + 26.3 0.000 intron (NM_001370094, intron 1 of 10) MER21B|LTR|ERVL 19751 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr16-594 chr16 2482856 2483066 + 26.3 0.000 intron (NM_020705, intron 1 of 6) intron (NM_020705, intron 1 of 6) 7834 NM_001199107 57465 Hs.353087 NM_020705 ENSG00000162065 TBC1D24 DFNA65|DFNB86|DOORS|EIEE16|FIME|TLDC6 TBC1 domain family member 24 protein-coding chrX-147 chrX 130245416 130245626 + 26.3 0.000 intron (NM_017666, intron 3 of 18) AmnSINE1|SINE|5S-Deu-L2 23378 NM_017666 55609 Hs.308418 NM_017666 ENSG00000056277 ZNF280C SUHW3|ZNF633|ZPET zinc finger protein 280C protein-coding chr19-581 chr19 18374402 18374612 + 26.3 0.000 Intergenic Intergenic -11651 NM_004864 9518 Hs.616962 NM_004864 ENSG00000130513 GDF15 GDF-15|MIC-1|MIC1|NAG-1|PDF|PLAB|PTGFB growth differentiation factor 15 protein-coding chr11-325 chr11 33736455 33736665 + 26.3 0.000 promoter-TSS (NM_203330) promoter-TSS (NM_203330) -81 NM_000611 966 Hs.278573 NM_000611 ENSG00000085063 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule (CD59 blood group) protein-coding chr2-686 chr2 73780075 73780285 + 26.3 0.000 promoter-TSS (NM_003584) promoter-TSS (NM_003584) -23 NM_003584 8446 Hs.14611 NM_003584 ENSG00000144048 DUSP11 PIR1 dual specificity phosphatase 11 protein-coding chr7-281 chr7 66682637 66682847 + 26.3 0.000 intron (NM_001367745, intron 1 of 7) CpG 576 NM_001287060 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr20-95 chr20 58888922 58889132 + 26.3 0.000 promoter-TSS (NR_126334) promoter-TSS (NR_126334) -153 NM_001309840 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|PITA3|POH|SCG6|SgVI GNAS complex locus protein-coding chr2-1203 chr2 175931859 175932069 + 26.3 0.000 intron (NM_001305010, intron 11 of 11) intron (NM_001305010, intron 11 of 11) 70303 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr2-418 chr2 219217988 219218198 + 26.3 0.000 intron (NM_005689, intron 1 of 18) intron (NM_005689, intron 1 of 18) 865 NM_001349828 10058 Hs.107911 NM_005689 ENSG00000115657 ABCB6 ABC|LAN|MTABC3|PRP|umat ATP binding cassette subfamily B member 6 (Langereis blood group) protein-coding chr16-140 chr16 87493051 87493261 + 26.3 0.000 Intergenic CpG-10077 -1031 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr12-414 chr12 30719217 30719427 + 26.3 0.000 intron (NM_001206856, intron 11 of 16) intron (NM_001206856, intron 11 of 16) -23453 NM_006390 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr11-1024 chr11 100863309 100863519 + 26.3 0.000 intron (NM_001367945, intron 6 of 25) intron (NM_001367945, intron 6 of 25) -70860 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr12-300 chr12 121888533 121888743 + 26.3 0.000 promoter-TSS (NM_001261400) promoter-TSS (NM_001261400) -27 NM_001171993 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr14-223 chr14 68548259 68548469 + 26.3 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 80423 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr18-75 chr18 68715068 68715278 + 26.3 0.000 promoter-TSS (NM_001350516) promoter-TSS (NM_001350516) 0 NM_001350513 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr10-840 chr10 124999736 124999946 + 26.3 0.000 intron (NM_001290214, intron 5 of 10) intron (NM_001290214, intron 5 of 10) 6177 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr16-669 chr16 57627463 57627673 + 26.3 0.000 intron (NM_001370441, intron 1 of 13) L2b|LINE|L2 -1062 NM_001145773 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr7-495 chr7 149233645 149233855 + 26.3 0.000 Intergenic AluSz|SINE|Alu -5901 NM_012256 7988 Hs.490510 NM_012256 ENSG00000170260 ZNF212 C2H2-150|ZNF182|ZNFC150 zinc finger protein 212 protein-coding chr13-188 chr13 94073195 94073405 + 26.3 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) 114691 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr18-147 chr18 24271012 24271222 + 26.3 0.000 intron (NM_001242508, intron 3 of 15) intron (NM_001242508, intron 3 of 15) 1115 NM_018030 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr14-497 chr14 104078042 104078252 + 26.3 0.000 Intergenic LTR41C|LTR|ERVL -7553 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr1-331 chr1 43974905 43975115 + 26.3 0.000 promoter-TSS (NM_004047) promoter-TSS (NM_004047) 50 NM_004047 533 Hs.596514 NM_004047 ENSG00000117410 ATP6V0B ATP6F|HATPL|VMA16 ATPase H+ transporting V0 subunit b protein-coding chr5-330 chr5 80487893 80488103 + 26.3 0.000 promoter-TSS (NM_205548) promoter-TSS (NM_205548) -102 NM_205548 167555 Hs.338182 NM_205548 ENSG00000152380 FAM151B UNQ9217 family with sequence similarity 151 member B protein-coding chr15-161 chr15 90352201 90352411 + 26.3 0.000 promoter-TSS (NM_001004309) promoter-TSS (NM_001004309) 22 NM_001004309 342132 Hs.55307 NM_001004309 ENSG00000196391 ZNF774 - zinc finger protein 774 protein-coding chr3-328 chr3 53160733 53160943 + 26.3 0.000 promoter-TSS (NM_001354680) promoter-TSS (NM_001354680) -371 NM_212539 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr3-456 chr3 39639416 39639626 + 26.3 0.000 Intergenic Intergenic 137455 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr3-352 chr3 140117156 140117366 + 26.3 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 182076 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr17-339 chr17 77325385 77325595 + 26.3 0.000 intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) 5975 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr5-244 chr5 177006599 177006809 + 26.3 0.000 promoter-TSS (NR_146149) promoter-TSS (NR_146149) 75 NM_001199298 51720 Hs.232721 NM_016290 ENSG00000087206 UIMC1 RAP80|X2HRIP110 ubiquitin interaction motif containing 1 protein-coding chr11-639 chr11 62680878 62681088 + 26.3 0.000 Intergenic Intergenic -1866 NM_001286078 51035 Hs.351296 NM_015853 ENSG00000162191 UBXN1 2B28|SAKS1|UBXD10 UBX domain protein 1 protein-coding chr5-563 chr5 40552325 40552535 + 26.3 0.000 Intergenic Intergenic -127485 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr6-156 chr6 89352665 89352875 + 26.3 0.000 promoter-TSS (NM_016021) promoter-TSS (NM_016021) -48 NM_016021 51465 Hs.163776 NM_016021 ENSG00000198833 UBE2J1 CGI-76|HSPC153|HSPC205|HSU93243|NCUBE-1|NCUBE1|UBC6|UBC6E|Ubc6p ubiquitin conjugating enzyme E2 J1 protein-coding chr4-242 chr4 112231504 112231714 + 26.3 0.000 promoter-TSS (NR_136622) promoter-TSS (NR_136622) -178 NM_001128426 55435 Hs.435991 NM_018569 ENSG00000138660 AP1AR 2C18|C4orf16|GBAR|PRO0971|gamma-BAR adaptor related protein complex 1 associated regulatory protein protein-coding chr17-885 chr17 33284122 33284332 + 26.3 0.000 intron (NM_001094, intron 1 of 9) MamRep434|DNA|TcMar-Tigger 8761 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr20-152 chr20 63740749 63740959 + 26.3 0.000 intron (NM_020062, intron 2 of 7) intron (NM_020062, intron 2 of 7) 1078 NM_020062 56731 Hs.435126 NM_020062 ENSG00000125520 SLC2A4RG GEF|HDBP-1|HDBP1|Si-1-2|Si-1-2-19 SLC2A4 regulator protein-coding chr11-404 chr11 95923943 95924153 + 26.3 0.000 promoter-TSS (NM_201278) promoter-TSS (NM_201278) 59 NM_201281 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr3-278 chr3 12557235 12557445 + 26.3 0.000 intron (NM_001271707, intron 1 of 6) CpG 253 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr4-246 chr4 148442585 148442795 + 26.3 0.000 promoter-TSS (NM_001166104) promoter-TSS (NM_001166104) -276 NM_000901 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr14-83 chr14 96391835 96392045 + 26.3 0.000 promoter-TSS (NM_152327) promoter-TSS (NM_152327) -188 NM_001350891 122481 Hs.667462 NM_152327 ENSG00000140057 AK7 AK 7|SPGF27 adenylate kinase 7 protein-coding chr15-601 chr15 48592349 48592559 + 26.3 0.000 intron (NM_000138, intron 6 of 65) intron (NM_000138, intron 6 of 65) 53334 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr15-664 chr15 67101784 67101994 + 26.3 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -23827 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr17-629 chr17 44947697 44947907 + 26.3 0.000 promoter-TSS (NM_001264573) promoter-TSS (NM_001264573) -29 NM_001264573 146909 Hs.135094 NM_001080443 ENSG00000186185 KIF18B - kinesin family member 18B protein-coding chr10-334 chr10 71965250 71965460 + 26.3 0.000 intron (NM_004273, intron 1 of 2) intron (NM_004273, intron 1 of 2) 960 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr12-299 chr12 111369070 111369280 + 26.3 0.000 promoter-TSS (NM_001177996) promoter-TSS (NM_001177996) -80 NM_001177997 144717 Hs.173088 NM_144671 ENSG00000198324 PHETA1 FAM109A|IPIP27A|SES1 PH domain containing endocytic trafficking adaptor 1 protein-coding chr3-344 chr3 188900700 188900910 + 26.3 0.000 Intergenic Intergenic 46834 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr17-485 chr17 76446864 76447074 + 26.3 0.000 intron (NM_022066, intron 1 of 17) intron (NM_022066, intron 1 of 17) 6183 NM_022066 63893 Hs.16130 NM_022066 ENSG00000175931 UBE2O E2-230K ubiquitin conjugating enzyme E2 O protein-coding chr3-254 chr3 126926733 126926943 + 26.3 0.000 intron (NM_032343, intron 6 of 7) intron (NM_032343, intron 6 of 7) -61756 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr11-500 chr11 126917855 126918065 + 26.3 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -22786 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr1-452 chr1 207752051 207752261 + 26.3 0.000 5' UTR (NM_172353, exon 1 of 11) 5' UTR (NM_172353, exon 1 of 11) 102 NM_172353 4179 Hs.510402 NM_002389 ENSG00000117335 CD46 AHUS2|MCP|MIC10|TLX|TRA2.10 CD46 molecule protein-coding chr20-104 chr20 4898396 4898606 + 26.3 0.000 intron (NM_005116, intron 6 of 16) intron (NM_005116, intron 6 of 16) -74893 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr3-643 chr3 138390413 138390623 + 26.3 0.000 intron (NM_012219, intron 2 of 5) intron (NM_012219, intron 2 of 5) 41298 NM_001252090 22808 Hs.527021 NM_012219 ENSG00000158186 MRAS M-RAs|R-RAS3|RRAS3 muscle RAS oncogene homolog protein-coding chr10-672 chr10 97539820 97540030 + 26.3 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) -32516 NM_001291218 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr16-274 chr16 2911793 2912003 + 26.3 0.000 promoter-TSS (NM_001308068) promoter-TSS (NM_001308068) -81 NM_032296 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr7-583 chr7 111410034 111410244 + 26.3 0.000 intron (NM_032549, intron 3 of 5) L1MEc|LINE|L1 152152 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr5-610 chr5 52948535 52948745 + 26.3 0.000 intron (NM_181501, intron 28 of 28) intron (NM_181501, intron 28 of 28) -40712 NR_073105 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr14-863 chr14 55103342 55103552 + 26.3 0.000 Intergenic Intergenic -25805 NM_002306 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr21-35 chr21 29024915 29025125 + 26.3 0.000 intron (NM_001001992, intron 1 of 17) CpG 352 NM_006447 10600 Hs.99819 NM_006447 ENSG00000156256 USP16 UBP-M|UBPM ubiquitin specific peptidase 16 protein-coding chr19-827 chr19 4084554 4084764 + 26.3 0.000 Intergenic Intergenic -17760 NM_015898 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr18-110 chr18 76459989 76460199 + 26.3 0.000 intron (NM_014643, intron 2 of 6) intron (NM_014643, intron 2 of 6) -31558 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr2-1143 chr2 74576830 74577040 + 26.3 0.000 intron (NM_001321739, intron 5 of 10) intron (NM_001321739, intron 5 of 10) 22775 NM_001381 1796 Hs.103854 NM_001381 ENSG00000115325 DOK1 P62DOK|pp62 docking protein 1 protein-coding chr10-457 chr10 71985798 71986008 + 26.3 0.000 intron (NM_004273, intron 1 of 2) L1MD1|LINE|L1 21508 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr5-169 chr5 132215407 132215617 + 26.3 0.000 intron (NM_001365681, intron 4 of 13) intron (NM_001365681, intron 4 of 13) 2406 NR_106888 102465498 NR_106888 ENSG00000283678 MIR6830 hsa-mir-6830 microRNA 6830 ncRNA chr1-1266 chr1 20739361 20739571 + 26.3 0.000 Intergenic Intergenic -6763 NM_001103160 400745 Hs.591522 NM_001103160 ENSG00000189410 SH2D5 - SH2 domain containing 5 protein-coding chr14-420 chr14 69535273 69535483 + 26.2 0.000 Intergenic Intergenic 39493 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr6-339 chr6 130500791 130501001 + 26.2 0.000 Intergenic L3|LINE|CR1 63779 NM_052913 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr17-899 chr17 61235795 61236005 + 26.2 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 131804 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr16-373 chr16 29820410 29820620 + 26.2 0.000 promoter-TSS (NM_005115) promoter-TSS (NM_005115) 53 NM_005115 9961 Hs.632177 NM_005115 ENSG00000013364 MVP LRP|VAULT1 major vault protein protein-coding chr1-1062 chr1 179292463 179292673 + 26.2 0.000 Intergenic Intergenic -1146 NM_001252511 6646 Hs.445588 NM_003101 ENSG00000057252 SOAT1 ACACT|ACAT|ACAT-1|ACAT1|SOAT|STAT sterol O-acyltransferase 1 protein-coding chr19-560 chr19 6361474 6361684 + 26.2 0.000 promoter-TSS (NM_006012) promoter-TSS (NM_006012) 48 NM_006012 8192 Hs.515092 NM_006012 ENSG00000125656 CLPP DFNB81|PRLTS3 caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding chr5-171 chr5 154857606 154857816 + 26.2 0.000 promoter-TSS (NM_001301073) promoter-TSS (NM_001301073) -538 NM_001301083 9337 Hs.26703 NM_004779 ENSG00000155508 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex subunit 8 protein-coding chr11-572 chr11 75558150 75558360 + 26.2 0.000 Intergenic Intergenic -3998 NM_001207014 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr7-602 chr7 131244313 131244523 + 26.2 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 83361 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr1-285 chr1 43991553 43991763 + 26.2 0.000 promoter-TSS (NM_001349127) promoter-TSS (NM_001349127) 59 NM_152499 149473 Hs.632394 NM_152499 ENSG00000159214 CCDC24 - coiled-coil domain containing 24 protein-coding chr13-58 chr13 111153428 111153638 + 26.2 0.000 promoter-TSS (NM_001354054) promoter-TSS (NM_001354054) 44 NR_120398 101060553 Hs.662213 NR_120398 LOC101060553 - uncharacterized LOC101060553 ncRNA chr2-651 chr2 10122498 10122708 + 26.2 0.000 promoter-TSS (NM_001165931) promoter-TSS (NM_001165931) 35 NM_001165931 6241 Hs.226390 NM_001034 ENSG00000171848 RRM2 R2|RR2|RR2M ribonucleotide reductase regulatory subunit M2 protein-coding chr12-578 chr12 109819028 109819238 + 26.2 0.000 intron (NM_021625, intron 1 of 15) intron (NM_021625, intron 1 of 15) -4306 NM_147204 59341 Hs.506713 NM_021625 ENSG00000111199 TRPV4 BCYM3|CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel subfamily V member 4 protein-coding chr8-297 chr8 144869854 144870064 + 26.2 0.000 Intergenic LTR13|LTR|ERVK -16403 NM_001081003 28991 Hs.493218 NM_014066 ENSG00000170619 COMMD5 HCARG|HT002 COMM domain containing 5 protein-coding chr8-218 chr8 98045397 98045607 + 26.2 0.000 promoter-TSS (NM_000989) promoter-TSS (NM_000989) 43 NM_000989 6156 Hs.400295 NM_000989 ENSG00000156482 RPL30 L30 ribosomal protein L30 protein-coding chr3-200 chr3 196867828 196868038 + 26.2 0.000 promoter-TSS (NM_001308045) promoter-TSS (NM_001308045) 13 NM_152699 205564 Hs.240770 NM_152699 ENSG00000119231 SENP5 - SUMO specific peptidase 5 protein-coding chr19-561 chr19 7534508 7534718 + 26.2 0.000 promoter-TSS (NM_001166113) promoter-TSS (NM_001166113) -126 NM_001166111 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chr1-1026 chr1 240351052 240351262 + 26.2 0.000 intron (NM_001348094, intron 11 of 14) intron (NM_001348094, intron 11 of 14) 259274 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr3-405 chr3 129027015 129027225 + 26.2 0.000 intron (NM_024768, intron 2 of 7) CpG -23118 NM_001348521 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr7-505 chr7 100874992 100875202 + 26.2 0.000 promoter-TSS (NM_001128852) promoter-TSS (NM_001128852) -6 NM_015908 51593 Hs.111801 NM_015908 ENSG00000087087 SRRT ARS2|ASR2|serrate serrate, RNA effector molecule protein-coding chr15-162 chr15 90560354 90560564 + 26.2 0.000 intron (NM_001042574, intron 2 of 14) Charlie13a|DNA|hAT-Charlie 30536 NM_001042574 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr9-498 chr9 128421244 128421454 + 26.2 0.000 intron (NM_016174, intron 1 of 12) intron (NM_016174, intron 1 of 12) 492 NM_016174 51148 Hs.495230 NM_016174 ENSG00000167123 CERCAM CEECAM1|GLT25D3 cerebral endothelial cell adhesion molecule protein-coding chr7-428 chr7 105589518 105589728 + 26.2 0.000 Intergenic Intergenic -8081 NM_001355527 100130771 Hs.719432 NM_001355526 ENSG00000185055 EFCAB10 - EF-hand calcium binding domain 10 protein-coding chr14-295 chr14 51442910 51443120 + 26.2 0.000 Intergenic Intergenic -45880 NR_146549 105370496 Hs.578228 NR_146549 ENSG00000258808 LINC02310 - long intergenic non-protein coding RNA 2310 ncRNA chr16-386 chr16 56989516 56989726 + 26.2 0.000 promoter-TSS (NM_001330552) promoter-TSS (NM_001330552) 64 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr8-217 chr8 41792496 41792706 + 26.2 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 5021 NM_000037 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr21-108 chr21 39029478 39029688 + 26.2 0.000 Intergenic Intergenic -51809 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr21-140 chr21 41665230 41665440 + 26.2 0.000 Intergenic Intergenic -13967 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr14-148 chr14 92106323 92106533 + 26.2 0.000 intron (NR_028468, intron 1 of 8) CpG 154 NM_030660 4287 Hs.532632 NM_004993 ENSG00000066427 ATXN3 AT3|ATX3|JOS|MJD|MJD1|SCA3 ataxin 3 protein-coding chr3-1441 chr3 30659400 30659610 + 26.2 0.000 intron (NM_001024847, intron 4 of 7) intron (NM_001024847, intron 4 of 7) 52904 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr19-538 chr19 588373 588583 + 26.2 0.000 Intergenic CpG -1403 NM_001194 610 Hs.124161 NM_001194 ENSG00000099822 HCN2 BCNG-2|BCNG2|HAC-1 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 protein-coding chrX-205 chrX 15947681 15947891 + 26.2 0.000 Intergenic Intergenic -92973 NM_001272071 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr7-327 chr7 29685160 29685370 + 26.2 0.000 promoter-TSS (NR_024278) promoter-TSS (NR_024278) 111 NR_158194 442524 Hs.652669 NR_036482 ENSG00000227855 DPY19L2P3 - DPY19L2 pseudogene 3 pseudo chr1-896 chr1 156601275 156601485 + 26.2 0.000 intron (NM_182679, intron 1 of 7) intron (NM_182679, intron 1 of 7) 107 NM_182679 54865 Hs.193832 NM_015590 ENSG00000160818 GPATCH4 GPATC4 G-patch domain containing 4 protein-coding chr2-695 chr2 217890571 217890781 + 26.2 0.000 intron (NM_001308023, intron 9 of 29) intron (NM_001308023, intron 9 of 29) 9952 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr3-519 chr3 62109688 62109898 + 26.2 0.000 intron (NM_002841, intron 5 of 29) intron (NM_002841, intron 5 of 29) 209154 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr1-813 chr1 55443533 55443743 + 26.2 0.000 Intergenic Intergenic 217997 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr3-729 chr3 58998620 58998830 + 26.2 0.000 intron (NR_147235, intron 4 of 6) intron (NR_147235, intron 4 of 6) 51300 NM_198463 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr1-396 chr1 84690392 84690602 + 26.2 0.000 promoter-TSS (NM_001166295) promoter-TSS (NM_001166295) -29 NM_001166295 117178 Hs.22587 NM_014021 ENSG00000117155 SSX2IP ADIP|hMsd1 SSX family member 2 interacting protein protein-coding chr14-153 chr14 96797236 96797446 + 26.2 0.000 promoter-TSS (NM_003384) promoter-TSS (NM_003384) -41 NM_003384 7443 Hs.422662 NM_003384 ENSG00000100749 VRK1 PCH1|PCH1A VRK serine/threonine kinase 1 protein-coding chr20-299 chr20 34314509 34314719 + 26.2 0.000 Intergenic L2c|LINE|L2 -2812 NM_001161766 191 Hs.388004 NM_000687 ENSG00000101444 AHCY SAHH|adoHcyase adenosylhomocysteinase protein-coding chr12-382 chr12 6216128 6216338 + 26.2 0.000 intron (NM_001769, intron 1 of 7) intron (NM_001769, intron 1 of 7) 15833 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr4-468 chr4 39732787 39732997 + 26.2 0.000 intron (NM_001111113, intron 1 of 4) AluSz6|SINE|Alu 34756 NM_001312647 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr1-1652 chr1 238647975 238648185 + 26.2 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -162063 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr15-458 chr15 35427137 35427347 + 26.2 0.000 intron (NM_080650, intron 5 of 8) intron (NM_080650, intron 5 of 8) -54878 NR_037507 100500904 NR_037507 ENSG00000265102 MIR3942 - microRNA 3942 ncRNA chr16-471 chr16 265905 266115 + 26.2 0.000 TTS (NM_001284497) TTS (NM_001284497) 9934 NM_001286485 8786 Hs.65756 NM_003834 ENSG00000076344 RGS11 RS11 regulator of G protein signaling 11 protein-coding chr4-135 chr4 52722322 52722532 + 26.2 0.000 Intergenic CpG 9178 NR_003016 677810 Hs.635034 NR_003016 ENSG00000212588 SNORA26 HBI-6 small nucleolar RNA, H/ACA box 26 snoRNA chr11-903 chr11 61599449 61599659 + 26.2 0.000 intron (NR_110189, intron 2 of 3) intron (NR_110189, intron 2 of 3) 11060 NR_110189 101927495 Hs.553866 NR_110189 ENSG00000250230 LOC101927495 - uncharacterized LOC101927495 ncRNA chr11-334 chr11 65712294 65712504 + 26.2 0.000 exon (NM_182709, exon 2 of 13) exon (NM_182709, exon 2 of 13) 147 NM_182710 10524 Hs.397010 NM_006388 ENSG00000172977 KAT5 ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 lysine acetyltransferase 5 protein-coding chr11-873 chr11 43756658 43756868 + 26.2 0.000 intron (NM_016142, intron 3 of 10) Tigger12|DNA|TcMar-Tigger 76025 NM_016142 51144 Hs.132513 NM_016142 ENSG00000149084 HSD17B12 KAR|SDR12C1 hydroxysteroid 17-beta dehydrogenase 12 protein-coding chr17-290 chr17 20155798 20156008 + 26.2 0.000 promoter-TSS (NM_001243438) promoter-TSS (NM_001243438) -169 NM_001033555 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr3-1567 chr3 36244702 36244912 + 26.2 0.000 Intergenic Charlie29a|DNA|hAT-Charlie -135680 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr5-394 chr5 17359761 17359971 + 26.2 0.000 Intergenic Intergenic 27444 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LINC02111 - long intergenic non-protein coding RNA 2111 ncRNA chr17-684 chr17 48483491 48483701 + 26.2 0.000 Intergenic Intergenic 38763 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 - uncharacterized LOC101927166 ncRNA chr17-372 chr17 2212660 2212870 + 26.2 0.000 intron (NM_001256827, intron 3 of 11) intron (NM_001256827, intron 3 of 11) -19913 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr1-1593 chr1 48617421 48617631 + 26.2 0.000 intron (NM_001323575, intron 9 of 12) intron (NM_001323575, intron 9 of 12) -145318 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr21-48 chr21 29073612 29073822 + 26.2 0.000 promoter-TSS (NM_006585) promoter-TSS (NM_006585) -69 NM_006585 10694 Hs.125113 NM_006585 ENSG00000156261 CCT8 C21orf112|Cctq|D21S246|PRED71 chaperonin containing TCP1 subunit 8 protein-coding chr15-204 chr15 85331255 85331465 + 26.2 0.000 Intergenic Intergenic -49236 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr2-682 chr2 47094592 47094802 + 26.2 0.000 intron (NM_001163561, intron 5 of 6) intron (NM_001163561, intron 5 of 6) 60611 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr3-313 chr3 184168721 184168931 + 26.2 0.000 intron (NM_004423, intron 13 of 14) intron (NM_004423, intron 13 of 14) -6020 NM_001025205 1173 Hs.518460 NM_004068 ENSG00000161203 AP2M1 AP50|CLAPM1|mu2 adaptor related protein complex 2 subunit mu 1 protein-coding chr7-494 chr7 112481942 112482152 + 26.2 0.000 intron (NM_182597, intron 1 of 3) intron (NM_182597, intron 1 of 3) 1056 NM_182597 286006 Hs.396189 NM_182597 ENSG00000181016 LSMEM1 C7orf53 leucine rich single-pass membrane protein 1 protein-coding chr7-451 chr7 92904406 92904616 + 26.2 0.000 intron (NR_110087, intron 2 of 2) AmnSINE1|SINE|5S-Deu-L2 -67884 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr17-237 chr17 8489013 8489223 + 26.2 0.000 intron (NM_001256012, intron 35 of 42) MLT1F1|LTR|ERVL-MaLR 53234 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr2-1061 chr2 212974728 212974938 + 26.2 0.000 Intergenic Intergenic -48497 NR_039936 100616472 NR_039936 ENSG00000283637 MIR4776-2 mir-4776-2 microRNA 4776-2 ncRNA chr2-327 chr2 30665090 30665300 + 26.2 0.000 Intergenic Intergenic 142251 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr3-309 chr3 57969912 57970122 + 26.2 0.000 Intergenic Intergenic -38405 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr10-301 chr10 124744390 124744600 + 26.2 0.000 promoter-TSS (NM_014661) promoter-TSS (NM_014661) -117 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr16-813 chr16 59210878 59211088 + 26.2 0.000 Intergenic Intergenic -476667 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr1-605 chr1 206686060 206686270 + 26.2 0.000 intron (NM_004759, intron 1 of 9) CpG 1260 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr15-439 chr15 43911458 43911668 + 26.2 0.000 intron (NM_032892, intron 4 of 13) MLT1F1|LTR|ERVL-MaLR -33392 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr9-663 chr9 21616159 21616369 + 26.2 0.000 Intergenic MIRc|SINE|MIR -56466 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr11-749 chr11 89491256 89491466 + 26.0 0.000 promoter-TSS (NM_001143836) promoter-TSS (NM_001143836) 14 NM_016931 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr10-1257 chr10 110279435 110279645 + 26.0 0.000 intron (NM_001008541, intron 3 of 4) intron (NM_001008541, intron 3 of 4) 25380 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr1-868 chr1 174799463 174799673 + 26.0 0.000 promoter-TSS (NM_001243765) promoter-TSS (NM_001243765) -170 NM_001366455 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr10-351 chr10 71840274 71840484 + 26.0 0.000 intron (NM_001042465, intron 1 of 14) intron (NM_001042465, intron 1 of 14) 10872 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr17-360 chr17 76353946 76354156 + 26.0 0.000 promoter-TSS (NM_002766) promoter-TSS (NM_002766) -135 NM_002766 5635 Hs.77498 NM_002766 ENSG00000161542 PRPSAP1 PAP39 phosphoribosyl pyrophosphate synthetase associated protein 1 protein-coding chrX-100 chrX 71068427 71068637 + 26.0 0.000 promoter-TSS (NM_013346) promoter-TSS (NM_013346) -84 NM_001256187 29934 Hs.260750 NM_013346 ENSG00000147164 SNX12 - sorting nexin 12 protein-coding chr21-44 chr21 34615374 34615584 + 26.0 0.000 promoter-TSS (NM_004414) promoter-TSS (NM_004414) -366 NM_004414 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chrX-85 chrX 149540731 149540941 + 26.0 0.000 promoter-TSS (NM_001171908) promoter-TSS (NM_001171908) -176 NM_001324280 91966 Hs.458216 NM_178124 ENSG00000197620 CXorf40A CXorf40|EOLA1 chromosome X open reading frame 40A protein-coding chr2-301 chr2 135876440 135876650 + 26.0 0.000 promoter-TSS (NM_005915) promoter-TSS (NM_005915) -102 NM_005915 4175 Hs.444118 NM_005915 ENSG00000076003 MCM6 MCG40308|Mis5|P105MCM minichromosome maintenance complex component 6 protein-coding chr1-1103 chr1 184025271 184025481 + 26.0 0.000 intron (NM_001303421, intron 1 of 11) intron (NM_001303421, intron 1 of 11) 12352 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr4-353 chr4 51859692 51859902 + 26.0 0.000 intron (NM_001287757, intron 2 of 11) intron (NM_001287757, intron 2 of 11) 16218 NM_001287755 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr7-220 chr7 123534840 123535050 + 26.0 0.000 promoter-TSS (NM_178827) promoter-TSS (NM_178827) -281 NR_104245 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr1-689 chr1 1724264 1724474 + 26.0 0.000 promoter-TSS (NM_001313896) promoter-TSS (NM_001313896) -12 NR_132740 728642 Hs.651228 NM_024011 ENSG00000008128 CDK11A CDC2L2|CDC2L3|CDK11-p110|CDK11-p46|CDK11-p58|PITSLRE|p58GTA cyclin dependent kinase 11A protein-coding chr1-1394 chr1 192788195 192788405 + 26.0 0.000 Intergenic Intergenic -20739 NM_002923 5997 Hs.78944 NM_002923 ENSG00000116741 RGS2 G0S8 regulator of G protein signaling 2 protein-coding chr10-1250 chr10 99776085 99776295 + 26.0 0.000 Intergenic Intergenic -6450 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr19-543 chr19 23687014 23687224 + 26.0 0.000 promoter-TSS (NM_138330) promoter-TSS (NM_138330) 93 NM_138330 171392 Hs.264345 NM_138330 ENSG00000197372 ZNF675 TBZF|TIZ zinc finger protein 675 protein-coding chr11-732 chr11 3095824 3096034 + 26.0 0.000 intron (NM_020896, intron 14 of 21) L1MC5|LINE|L1 -38506 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr19-586 chr19 43757495 43757705 + 26.0 0.000 Intergenic AluJr|SINE|Alu -2638 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr1-859 chr1 97192958 97193168 + 26.0 0.000 intron (NM_000110, intron 20 of 22) intron (NM_000110, intron 20 of 22) 97140 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr5-352 chr5 127029687 127029897 + 26.0 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 766 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr2-839 chr2 203909726 203909936 + 26.0 0.000 Intergenic Intergenic -26917 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr9-316 chr9 35812134 35812344 + 26.0 0.000 promoter-TSS (NM_001039592) promoter-TSS (NM_001039592) 23 NM_001039592 26206 Hs.256747 NM_012436 ENSG00000137098 SPAG8 BS-84|CILD28|CT142|HSD-1|SMP1|SPAG3|hSMP-1 sperm associated antigen 8 protein-coding chr1-1734 chr1 110308378 110308588 + 26.0 0.000 intron (NR_036595, intron 2 of 3) L2c|LINE|L2 30688 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 RBM15-AS1 AS-RBM15 RBM15 antisense RNA 1 ncRNA chr21-109 chr21 44016023 44016233 + 26.0 0.000 intron (NM_003274, intron 1 of 22) intron (NM_003274, intron 1 of 22) 3819 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr21-138 chr21 27423135 27423345 + 26.0 0.000 Intergenic Intergenic -299139 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr16-314 chr16 85137431 85137641 + 26.0 0.000 intron (NR_033984, intron 1 of 2) CpG 386 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr11-390 chr11 119095463 119095673 + 26.0 0.000 promoter-TSS (NM_002105) promoter-TSS (NM_002105) -101 NM_002105 3014 Hs.477879 NM_002105 ENSG00000188486 H2AFX H2A.X|H2A/X|H2AX H2A histone family member X protein-coding chr17-315 chr17 10697434 10697644 + 26.0 0.000 promoter-TSS (NM_004589) promoter-TSS (NM_004589) -6 NM_004589 6341 Hs.14511 NM_004589 ENSG00000133028 SCO1 SCOD1 SCO cytochrome c oxidase assembly protein 1 protein-coding chr11-392 chr11 34916473 34916683 + 26.0 0.000 promoter-TSS (NM_003477) promoter-TSS (NM_003477) -40 NM_003477 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding chr4-424 chr4 3919643 3919853 + 26.0 0.000 Intergenic Intergenic 35680 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr7-472 chr7 101882793 101883003 + 26.0 0.000 intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 65272 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr21-46 chr21 44817523 44817733 + 26.0 0.000 intron (NM_006936, intron 1 of 3) CpG 434 NM_006936 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr11-343 chr11 9364404 9364614 + 26.0 0.000 Intergenic CpG -20143 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chr15-270 chr15 78075628 78075838 + 26.0 0.000 intron (NM_144572, intron 1 of 12) intron (NM_144572, intron 1 of 12) 1919 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr16-472 chr16 1675189 1675399 + 26.0 0.000 3' UTR (NM_020825, exon 20 of 20) 3' UTR (NM_020825, exon 20 of 20) -2985 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 JPT2 C16orf34|HN1L|L11 Jupiter microtubule associated homolog 2 protein-coding chr16-413 chr16 86961233 86961443 + 26.0 0.000 Intergenic Intergenic -96446 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr1-384 chr1 28369729 28369939 + 26.0 0.000 promoter-TSS (NM_001350161) promoter-TSS (NM_001350161) 94 NM_001350161 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr7-523 chr7 55086878 55087088 + 26.0 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -22856 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr16-732 chr16 87986538 87986748 + 26.0 0.000 intron (NM_017869, intron 4 of 11) intron (NM_017869, intron 4 of 11) 16625 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr14-225 chr14 78764291 78764501 + 26.0 0.000 intron (NR_073547, intron 8 of 20) intron (NR_073547, intron 8 of 20) 360677 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr1-1916 chr1 227357532 227357742 + 26.0 0.000 Intergenic LTR16|LTR|ERVL -39145 NM_001366011 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr2-853 chr2 36433976 36434186 + 26.0 0.000 intron (NM_016441, intron 2 of 16) intron (NM_016441, intron 2 of 16) 78303 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr9-522 chr9 134715571 134715781 + 26.0 0.000 intron (NM_001278074, intron 4 of 65) LTR5_Hs|LTR|ERVK -62833 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr3-523 chr3 149174913 149175123 + 26.0 0.000 intron (NM_000096, intron 18 of 18) intron (NM_000096, intron 18 of 18) 45380 NM_001308258 84343 Hs.558314 NM_032383 ENSG00000163755 HPS3 BLOC2S1|SUTAL HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 protein-coding chr5-224 chr5 139262766 139262976 + 26.0 0.000 Intergenic Intergenic -10881 NR_003141 724102 Hs.268939 NR_003141 SNHG4 NCRNA00059|U19H small nucleolar RNA host gene 4 ncRNA chr1-808 chr1 22447753 22447963 + 26.0 0.000 Intergenic Intergenic -3993 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr7-466 chr7 66353488 66353698 + 26.0 0.000 intron (NM_003596, intron 4 of 5) intron (NM_003596, intron 4 of 5) 46815 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr10-239 chr10 98269600 98269810 + 26.0 0.000 Intergenic Intergenic -1511 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr5-246 chr5 40755926 40756136 + 26.0 0.000 promoter-TSS (NM_012382) promoter-TSS (NM_012382) -70 NM_012382 23548 Hs.348915 NM_012382 ENSG00000113638 TTC33 OSRF tetratricopeptide repeat domain 33 protein-coding chr1-1010 chr1 113042729 113042939 + 26.0 0.000 intron (NR_103777, intron 2 of 2) intron (NR_103777, intron 2 of 2) 30268 NR_103777 100996251 Hs.382067 NR_103777 ENSG00000238198 LRIG2-DT - LRIG2 divergent transcript ncRNA chr18-139 chr18 36672607 36672817 + 26.0 0.000 intron (NM_001281740, intron 14 of 28) intron (NM_001281740, intron 14 of 28) -9294 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr4-253 chr4 103019514 103019724 + 26.0 0.000 promoter-TSS (NM_139173) promoter-TSS (NM_139173) 86 NR_047515 150159 Hs.666728 NM_139173 ENSG00000164037 SLC9B1 NHA1|NHEDC1 solute carrier family 9 member B1 protein-coding chr5-608 chr5 43658620 43658830 + 26.0 0.000 intron (NM_012343, intron 16 of 21) L1MEb|LINE|L1 -55495 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr4-603 chr4 156476410 156476620 + 26.0 0.000 Intergenic Intergenic 495284 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr2-456 chr2 151828345 151828555 + 26.0 0.000 promoter-TSS (NM_177985) promoter-TSS (NM_177985) -29 NM_177985 26225 Hs.470233 NM_012097 ENSG00000162980 ARL5A ARFLP5|ARL5 ADP ribosylation factor like GTPase 5A protein-coding chr17-815 chr17 35713328 35713538 + 26.0 0.000 intron (NM_001030006, intron 20 of 21) intron (NM_001030006, intron 20 of 21) -18206 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr20-162 chr20 37202324 37202534 + 26.0 0.000 intron (NM_001324305, intron 5 of 17) intron (NM_001324305, intron 5 of 17) -22881 NM_152503 140699 Hs.349125 NM_152503 ENSG00000101353 MROH8 C20orf131|C20orf132 maestro heat like repeat family member 8 protein-coding chr1-1129 chr1 160206625 160206835 + 26.0 0.000 intron (NR_123725, intron 2 of 4) intron (NR_123725, intron 2 of 4) 1346 NR_123724 8682 Hs.517216 NM_003768 ENSG00000162734 PEA15 HMAT1|HUMMAT1H|MAT1|MAT1H|PEA-15|PED|PED-PEA15|PED/PEA15 proliferation and apoptosis adaptor protein 15 protein-coding chr15-159 chr15 58770931 58771141 + 25.9 0.000 promoter-TSS (NR_135474) promoter-TSS (NR_135474) -62 NR_135474 101928725 Hs.572321 NR_135474 ENSG00000245975 LOC101928725 - uncharacterized LOC101928725 ncRNA chr7-558 chr7 47435977 47436187 + 25.9 0.000 intron (NM_022748, intron 7 of 30) intron (NM_022748, intron 7 of 30) 28721 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr19-485 chr19 55605266 55605476 + 25.9 0.000 Intergenic CpG 5083 NM_153219 147807 Hs.440291 NM_153219 ENSG00000171443 ZNF524 - zinc finger protein 524 protein-coding chr8-156 chr8 124474211 124474421 + 25.9 0.000 promoter-TSS (NM_007218) promoter-TSS (NM_007218) 38 NR_108048 101927612 Hs.633137 NR_108047 ENSG00000245149 RNF139-AS1 - RNF139 antisense RNA 1 (head to head) ncRNA chr4-177 chr4 109703222 109703432 + 25.9 0.000 intron (NM_001226, intron 1 of 6) CpG 118 NR_133012 839 Hs.654616 NM_001226 ENSG00000138794 CASP6 MCH2 caspase 6 protein-coding chr5-234 chr5 40798334 40798544 + 25.9 0.000 promoter-TSS (NM_001355037) promoter-TSS (NM_001355037) -244 NM_001355034 5562 Hs.43322 NM_006251 ENSG00000132356 PRKAA1 AMPK|AMPKa1 protein kinase AMP-activated catalytic subunit alpha 1 protein-coding chr1-899 chr1 201457007 201457217 + 25.9 0.000 Intergenic Intergenic 12059 NR_073080 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr19-709 chr19 4066703 4066913 + 25.9 0.000 promoter-TSS (NM_015898) promoter-TSS (NM_015898) 91 NM_015898 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr3-493 chr3 11530344 11530554 + 25.9 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 38349 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr1-1091 chr1 59062033 59062243 + 25.9 0.000 intron (NR_110626, intron 2 of 2) MLT1J2|LTR|ERVL-MaLR 41662 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr3-210 chr3 128584481 128584691 + 25.9 0.000 Intergenic Intergenic -8500 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr5-701 chr5 59206191 59206401 + 25.9 0.000 intron (NM_006203, intron 2 of 14) intron (NM_006203, intron 2 of 14) 69819 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr11-828 chr11 68010802 68011012 + 25.9 0.000 intron (NM_001030010, intron 1 of 8) intron (NM_001030010, intron 1 of 8) 580 NM_001290059 221 Hs.523841 NM_000694 ENSG00000006534 ALDH3B1 ALDH4|ALDH7 aldehyde dehydrogenase 3 family member B1 protein-coding chr1-1867 chr1 85850322 85850532 + 25.9 0.000 intron (NM_152890, intron 37 of 59) intron (NM_152890, intron 37 of 59) -141994 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr7-721 chr7 140175338 140175548 + 25.9 0.000 intron (NM_030647, intron 1 of 19) intron (NM_030647, intron 1 of 19) 1540 NM_030647 80853 Hs.308710 NM_030647 ENSG00000006459 KDM7A JHDM1D lysine demethylase 7A protein-coding chr16-443 chr16 3364963 3365173 + 25.9 0.000 Intergenic CpG 7600 NM_001190476 100463285 NM_001190476 ENSG00000232196 MTRNR2L4 HN4 MT-RNR2 like 4 protein-coding chr11-506 chr11 72831510 72831720 + 25.9 0.000 Intergenic Intergenic 17204 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr7-755 chr7 130649015 130649225 + 25.9 0.000 intron (NM_001290033, intron 5 of 19) MLT1D-int|LTR|ERVL-MaLR 19628 NM_012133 26958 Hs.6421 NM_012133 ENSG00000158623 COPG2 2-COP|gamma-2-COP coatomer protein complex subunit gamma 2 protein-coding chr1-398 chr1 212950391 212950601 + 25.9 0.000 promoter-TSS (NM_024749) promoter-TSS (NM_024749) -45 NM_024749 79805 Hs.96885 NM_024749 ENSG00000143494 VASH2 - vasohibin 2 protein-coding chr3-393 chr3 14651521 14651731 + 25.9 0.000 promoter-TSS (NR_135523) promoter-TSS (NR_135523) -120 NR_135523 51244 Hs.517820 NM_016474 ENSG00000154781 CCDC174 C3orf19|HSPC212|IHPM|IHPMR coiled-coil domain containing 174 protein-coding chr3-620 chr3 177102688 177102898 + 25.9 0.000 intron (NM_001321194, intron 1 of 16) intron (NM_001321194, intron 1 of 16) 93685 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr14-314 chr14 100679803 100680013 + 25.9 0.000 Intergenic Intergenic 22640 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chr12-187 chr12 110431586 110431796 + 25.9 0.000 Intergenic AluY|SINE|Alu 18646 NM_001278556 10094 Hs.524741 NM_001278556 ENSG00000111229 ARPC3 ARC21|p21-Arc actin related protein 2/3 complex subunit 3 protein-coding chr12-238 chr12 21657664 21657874 + 25.9 0.000 promoter-TSS (NM_002300) promoter-TSS (NM_002300) 25 NM_001174097 3945 Hs.446149 NM_002300 ENSG00000111716 LDHB HEL-S-281|LDH-B|LDH-H|LDHBD|TRG-5 lactate dehydrogenase B protein-coding chr11-580 chr11 131666085 131666295 + 25.9 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -2634 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr10-687 chr10 17504814 17505024 + 25.9 0.000 Intergenic Intergenic -50324 NM_001345961 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr17-249 chr17 28598964 28599174 + 25.9 0.000 promoter-TSS (NM_006461) promoter-TSS (NM_006461) -44 NM_006461 10615 Hs.514033 NM_006461 ENSG00000076382 SPAG5 DEEPEST|MAP126|hMAP126 sperm associated antigen 5 protein-coding chr9-263 chr9 121074933 121075143 + 25.9 0.000 promoter-TSS (NM_001317163) promoter-TSS (NM_001317163) 83 NM_001369894 11064 Hs.653263 NM_007018 ENSG00000119397 CNTRL CEP1|CEP110|FAN|bA165P4.1 centriolin protein-coding chr11-355 chr11 61581309 61581519 + 25.9 0.000 promoter-TSS (NM_001365809) promoter-TSS (NM_001365809) -338 NM_001370211 9066 Hs.131188 NM_004200 ENSG00000011347 SYT7 IPCA-7|IPCA7|PCANAP7|SYT-VII|SYTVII synaptotagmin 7 protein-coding chr9-562 chr9 88400111 88400321 + 25.9 0.000 intron (NM_006717, intron 1 of 5) ERVL-E-int|LTR|ERVL 11772 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr1-272 chr1 53739313 53739523 + 25.9 0.000 promoter-TSS (NM_001367484) promoter-TSS (NM_001367484) -254 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr5-654 chr5 14156588 14156798 + 25.9 0.000 intron (NM_007118, intron 1 of 56) L1MC4|LINE|L1 13351 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr19-375 chr19 19033601 19033811 + 25.9 0.000 promoter-TSS (NM_001321698) promoter-TSS (NM_001321698) 103 NM_033415 93436 Hs.77876 NM_033415 ENSG00000105676 ARMC6 R30923_1 armadillo repeat containing 6 protein-coding chr3-367 chr3 53347501 53347711 + 25.9 0.000 promoter-TSS (NM_001290205) promoter-TSS (NM_001290205) -63 NM_001290204 55802 Hs.476353 NM_018403 ENSG00000272886 DCP1A HSA275986|Nbla00360|SMAD4IP1|SMIF decapping mRNA 1A protein-coding chr3-762 chr3 57151135 57151345 + 25.9 0.000 intron (NM_001318864, intron 2 of 13) intron (NM_001318864, intron 2 of 13) 14113 NM_017563 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding chr19-502 chr19 4639267 4639477 + 25.9 0.000 promoter-TSS (NM_001167942) promoter-TSS (NM_001167942) -144 NM_152362 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr1-579 chr1 9280515 9280725 + 25.9 0.000 Intergenic Intergenic -12274 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr7-1178 chr7 27547495 27547705 + 25.9 0.000 intron (NM_152740, intron 4 of 7) intron (NM_152740, intron 4 of 7) -68374 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr7-243 chr7 4775396 4775606 + 25.9 0.000 promoter-TSS (NM_014855) promoter-TSS (NM_014855) -122 NM_014855 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 subunit zeta 1 protein-coding chr3-225 chr3 27484357 27484567 + 25.9 0.000 promoter-TSS (NR_135544) promoter-TSS (NR_135544) -78 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr17-426 chr17 731925 732135 + 25.9 0.000 promoter-TSS (NM_024792) promoter-TSS (NM_024792) -516 NM_001318007 79850 Hs.154396 NM_024792 ENSG00000167695 TLCD3A CT120|FAM57A TLC domain containing 3A protein-coding chr6-114 chr6 169253903 169254113 + 25.9 0.000 5' UTR (NM_003247, exon 1 of 23) 5' UTR (NM_003247, exon 1 of 23) 106 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr6-217 chr6 35363380 35363590 + 25.9 0.000 intron (NM_001171819, intron 2 of 6) intron (NM_001171819, intron 2 of 6) 20927 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr1-1049 chr1 84847261 84847471 + 25.9 0.000 intron (NM_012152, intron 2 of 2) intron (NM_012152, intron 2 of 2) 45840 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding KI270733.1-7 KI270733.1 175031 175211 + 25.9 0.000 NA NA NA NA chr13-205 chr13 35917794 35918004 + 25.9 0.000 intron (NM_001330071, intron 4 of 16) intron (NM_001330071, intron 4 of 16) -62038 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr6-574 chr6 80457408 80457618 + 25.9 0.000 Intergenic Intergenic 350842 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr17-514 chr17 2011847 2012057 + 25.9 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -5764 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr5-624 chr5 131532217 131532427 + 25.9 0.000 intron (NM_016340, intron 6 of 27) intron (NM_016340, intron 6 of 27) 102907 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr16-351 chr16 1325748 1325958 + 25.9 0.000 3' UTR (NM_003345, exon 7 of 7) 3' UTR (NM_003345, exon 7 of 7) -7792 NM_001199098 8938 Hs.458427 NM_003933 ENSG00000007516 BAIAP3 BAP3 BAI1 associated protein 3 protein-coding chr13-197 chr13 98454624 98454834 + 25.9 0.000 3' UTR (NM_001286839, exon 28 of 28) 3' UTR (NM_001286839, exon 28 of 28) 67396 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr1-806 chr1 9376879 9377089 + 25.9 0.000 Intergenic Intergenic 51932 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr8-296 chr8 143430737 143430947 + 25.9 0.000 promoter-TSS (NM_201589) promoter-TSS (NM_201589) -110 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr5-387 chr5 44808695 44808905 + 25.9 0.000 promoter-TSS (NM_016640) promoter-TSS (NM_016640) -7 NR_109863 100506674 Hs.575213 NR_109862 MRPS30-DT BRCAT54 MRPS30 divergent transcript ncRNA chr5-349 chr5 150138987 150139197 + 25.9 0.000 intron (NM_002609, intron 1 of 22) intron (NM_002609, intron 1 of 22) 16753 NM_001355016 5159 Hs.509067 NM_002609 ENSG00000113721 PDGFRB CD140B|IBGC4|IMF1|JTK12|KOGS|PDGFR|PDGFR-1|PDGFR1|PENTT platelet derived growth factor receptor beta protein-coding chr9-415 chr9 22009283 22009493 + 25.9 0.000 promoter-TSS (NM_078487) promoter-TSS (NM_078487) -75 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr13-147 chr13 30430327 30430537 + 25.9 0.000 TTS (NM_001355247) TTS (NM_001355247) 7939 NM_001355247 171222 NM_001355247 ENSG00000236444 UBE2L5 UBCH7N2|UBE2L5P ubiquitin conjugating enzyme E2 L5 protein-coding chr16-590 chr16 87868457 87868667 + 25.9 0.000 intron (NM_003486, intron 1 of 9) intron (NM_003486, intron 1 of 9) 945 NM_003486 8140 Hs.513797 NM_003486 ENSG00000103257 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16 solute carrier family 7 member 5 protein-coding chr18-157 chr18 9643672 9643882 + 25.9 0.000 Intergenic Intergenic 28513 NR_110774 101927323 Hs.151204 NR_110773 ENSG00000263627 PPP4R1-AS1 - PPP4R1 antisense RNA 1 ncRNA chr1-898 chr1 177209366 177209576 + 25.9 0.000 intron (NM_021165, intron 1 of 7) AmnSINE1|SINE|5S-Deu-L2 38513 NM_021165 57795 Hs.495918 NM_021165 ENSG00000198797 BRINP2 DBCCR1L2|FAM5B BMP/retinoic acid inducible neural specific 2 protein-coding chr13-406 chr13 111460498 111460708 + 25.9 0.000 Intergenic Intergenic -135406 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr16-432 chr16 8674525 8674735 + 25.9 0.000 promoter-TSS (NM_020686) promoter-TSS (NM_020686) 13 NM_020686 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr4-408 chr4 147714482 147714692 + 25.9 0.000 Intergenic Intergenic -17501 NM_024605 79658 Hs.368631 NM_024605 ENSG00000071205 ARHGAP10 GRAF2|PS-GAP|PSGAP Rho GTPase activating protein 10 protein-coding chr1-673 chr1 58546700 58546910 + 25.9 0.000 promoter-TSS (NM_145243) promoter-TSS (NM_145243) -79 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr8-305 chr8 42720558 42720768 + 25.9 0.000 intron (NM_001347717, intron 4 of 6) intron (NM_001347717, intron 4 of 6) 23287 NM_001347717 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr6-141 chr6 79947474 79947684 + 25.9 0.000 promoter-TSS (NM_022726) promoter-TSS (NM_022726) -26 NM_022726 6785 Hs.101915 NM_022726 ENSG00000118402 ELOVL4 ADMD|CT118|ISQMR|SCA34|STGD2|STGD3 ELOVL fatty acid elongase 4 protein-coding chr20-155 chr20 19688453 19688663 + 25.9 0.000 intron (NM_020689, intron 12 of 16) intron (NM_020689, intron 12 of 16) -197963 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr7-333 chr7 20330535 20330745 + 25.9 0.000 promoter-TSS (NM_002214) promoter-TSS (NM_002214) -260 NM_002214 3696 Hs.592171 NM_002214 ENSG00000105855 ITGB8 - integrin subunit beta 8 protein-coding chr11-1010 chr11 33372662 33372872 + 25.9 0.000 Intergenic Intergenic -3341 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr11-382 chr11 117300256 117300466 + 25.9 0.000 intron (NM_138971, intron 1 of 8) intron (NM_138971, intron 1 of 8) -4788 NM_001207049 23621 Hs.504003 NM_012104 ENSG00000186318 BACE1 ASP2|BACE|HSPC104 beta-secretase 1 protein-coding chr5-519 chr5 139513635 139513845 + 25.9 0.000 Intergenic Intergenic -30982 NM_001301738 340061 Hs.379754 NM_198282 ENSG00000184584 TMEM173 ERIS|MITA|MPYS|NET23|SAVI|STING|STING-beta|hMITA|hSTING transmembrane protein 173 protein-coding chr8-317 chr8 23074627 23074837 + 25.9 0.000 intron (NR_038873, intron 1 of 2) intron (NR_038873, intron 1 of 2) -5701 NM_147187 8795 Hs.521456 NM_003842 ENSG00000120889 TNFRSF10B CD262|DR5|KILLER|KILLER/DR5|TRAIL-R2|TRAILR2|TRICK2|TRICK2A|TRICK2B|TRICKB|ZTNFR9 TNF receptor superfamily member 10b protein-coding chr9-267 chr9 134135830 134136040 + 25.9 0.000 promoter-TSS (NM_017588) promoter-TSS (NM_017588) -147 NM_017588 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr16-568 chr16 4944794 4945004 + 25.9 0.000 Intergenic Intergenic -7751 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr4-260 chr4 75514277 75514487 + 25.9 0.000 promoter-TSS (NM_001278536) promoter-TSS (NM_001278536) 48 NM_001278539 25898 Hs.48297 NM_015436 ENSG00000163743 RCHY1 ARNIP|CHIMP|PIRH2|PRO1996|RNF199|ZCHY|ZNF363 ring finger and CHY zinc finger domain containing 1 protein-coding chr13-94 chr13 112606395 112606605 + 25.8 0.000 Intergenic CpG -18315 NM_001286279 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr12-159 chr12 45990571 45990781 + 25.8 0.000 promoter-TSS (NM_004719) promoter-TSS (NM_004719) -102 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr7-745 chr7 94190656 94190866 + 25.8 0.000 Intergenic Intergenic -186406 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr1-1362 chr1 29166325 29166535 + 25.8 0.000 intron (NM_005626, intron 1 of 5) intron (NM_005626, intron 1 of 5) 15470 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding chr17-526 chr17 82213472 82213682 + 25.8 0.000 promoter-TSS (NM_001316321) promoter-TSS (NM_001316321) -735 NM_001316321 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr15-193 chr15 96428793 96429003 + 25.8 0.000 Intergenic Intergenic 95133 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr8-308 chr8 101098622 101098832 + 25.8 0.000 Intergenic L2a|LINE|L2 46673 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr12-288 chr12 124838455 124838665 + 25.8 0.000 intron (NR_160424, intron 1 of 11) intron (NR_160424, intron 1 of 11) 1111 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr8-75 chr8 144465822 144466032 + 25.8 0.000 promoter-TSS (NM_138496) promoter-TSS (NM_138496) -226 NM_001129888 50626 Hs.459379 NM_032687 ENSG00000187954 CYHR1 CHRP cysteine and histidine rich 1 protein-coding chr12-466 chr12 123365734 123365944 + 25.8 0.000 promoter-TSS (NR_107039) promoter-TSS (NR_107039) 891 NR_157806 112268105 Hs.7012 NR_157805 SBNO1-AS1 - SBNO1 antisense RNA 1 ncRNA chr6-821 chr6 121767348 121767558 + 25.8 0.000 Intergenic Intergenic 331807 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr2-1088 chr2 218000126 218000336 + 25.8 0.000 Intergenic Intergenic 21524 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr3-730 chr3 69009655 69009865 + 25.8 0.000 exon (NM_173654, exon 4 of 15) exon (NM_173654, exon 4 of 15) 3924 NR_103826 285203 Hs.518059 NM_173654 ENSG00000163378 EOGT AER61|AOS4|C3orf64|EOGT1 EGF domain specific O-linked N-acetylglucosamine transferase protein-coding chr11-617 chr11 45457692 45457902 + 25.8 0.000 Intergenic Intergenic 86400 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr7-661 chr7 139916559 139916769 + 25.8 0.000 intron (NM_001314028, intron 4 of 12) intron (NM_001314028, intron 4 of 12) 87400 NM_001166253 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr12-750 chr12 43338979 43339189 + 25.8 0.000 Intergenic Intergenic 183769 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr20-272 chr20 3614063 3614273 + 25.8 0.000 intron (NM_001323332, intron 24 of 25) intron (NM_001323332, intron 24 of 25) 49231 NM_022139 64096 Hs.302025 NM_022139 ENSG00000125861 GFRA4 - GDNF family receptor alpha 4 protein-coding chr6-182 chr6 108294866 108295076 + 25.8 0.000 promoter-TSS (NM_001323005) promoter-TSS (NM_001323005) -83 NM_001323005 246269 Hs.259666 NM_145315 ENSG00000135537 AFG1L AFG1|LACE1|c222389 AFG1 like ATPase protein-coding chr2-1174 chr2 18299371 18299581 + 25.8 0.000 Intergenic AluJr4|SINE|Alu 261177 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr18-167 chr18 58362370 58362580 + 25.8 0.000 intron (NM_001144965, intron 19 of 30) intron (NM_001144965, intron 19 of 30) -88599 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr12-205 chr12 76348393 76348603 + 25.8 0.000 promoter-TSS (NM_024685) promoter-TSS (NM_024685) -83 NM_024685 79738 Hs.96322 NM_024685 ENSG00000179941 BBS10 C12orf58 Bardet-Biedl syndrome 10 protein-coding chr7-388 chr7 5563037 5563247 + 25.8 0.000 Intergenic Intergenic -29674 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr11-257 chr11 125887497 125887707 + 25.8 0.000 5' UTR (NM_001134793, exon 1 of 3) 5' UTR (NM_001134793, exon 1 of 3) 542 NM_001134793 219844 Hs.98133 NM_145014 ENSG00000198331 HYLS1 HLS HYLS1 centriolar and ciliogenesis associated protein-coding chr1-785 chr1 33389543 33389753 + 25.8 0.000 Intergenic Intergenic -14055 NM_198040 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr8-356 chr8 101501397 101501607 + 25.8 0.000 intron (NM_001330593, intron 1 of 15) GA-rich|Low_complexity|Low_complexity 9063 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr4-551 chr4 16757234 16757444 + 25.8 0.000 intron (NR_130734, intron 5 of 6) intron (NR_130734, intron 5 of 6) 141306 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr16-742 chr16 84700736 84700946 + 25.8 0.000 intron (NR_073577, intron 1 of 11) intron (NR_073577, intron 1 of 11) 841 NR_073577 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr1-319 chr1 201114248 201114458 + 25.8 0.000 3' UTR (NM_001270601, exon 1 of 1) 3' UTR (NM_001270601, exon 1 of 1) 1019 NM_001270601 647219 Hs.143949 NM_001270601 ENSG00000232237 ASCL5 bHLHa47 achaete-scute family bHLH transcription factor 5 protein-coding chr12-260 chr12 53324823 53325033 + 25.8 0.000 Intergenic CpG -3318 NM_001173466 8086 Hs.369144 NM_015665 ENSG00000094914 AAAS AAA|AAASb|ADRACALA|ADRACALIN|ALADIN|GL003 aladin WD repeat nucleoporin protein-coding chr8-212 chr8 30812621 30812831 + 25.8 0.000 promoter-TSS (NM_001009552) promoter-TSS (NM_001009552) 92 NM_001009552 5516 Hs.491440 NM_004156 ENSG00000104695 PPP2CB PP2Abeta|PP2CB protein phosphatase 2 catalytic subunit beta protein-coding chr4-403 chr4 20203603 20203813 + 25.8 0.000 Intergenic Intergenic -48197 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr6-484 chr6 141326577 141326787 + 25.8 0.000 Intergenic MER44D|DNA|TcMar-Tigger 642868 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr6-375 chr6 144710251 144710461 + 25.8 0.000 intron (NM_007124, intron 52 of 73) intron (NM_007124, intron 52 of 73) 304701 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr19-454 chr19 57916682 57916892 + 25.8 0.000 promoter-TSS (NM_001297734) promoter-TSS (NM_001297734) -195 NM_152475 147687 Hs.567710 NM_152475 ENSG00000173480 ZNF417 - zinc finger protein 417 protein-coding chr8-743 chr8 33471828 33472038 + 25.8 0.000 intron (NM_032664, intron 1 of 4) intron (NM_032664, intron 1 of 4) 1213 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr5-424 chr5 82278413 82278623 + 25.8 0.000 promoter-TSS (NM_001025) promoter-TSS (NM_001025) -132 NM_001349371 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr1-716 chr1 145964456 145964666 + 25.8 0.000 promoter-TSS (NM_001330685) promoter-TSS (NM_001330685) 14 NM_001039888 284615 Hs.620591 NM_001039888 ENSG00000272031 ANKRD34A ANKRD34 ankyrin repeat domain 34A protein-coding chr14-281 chr14 92540602 92540812 + 25.8 0.000 intron (NM_024832, intron 1 of 9) intron (NM_024832, intron 1 of 9) 26926 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr13-141 chr13 95267962 95268172 + 25.8 0.000 intron (NM_001105515, intron 1 of 20) LTR5_Hs|LTR|ERVK 33379 NM_005845 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr5-947 chr5 87120580 87120790 + 25.8 0.000 intron (NR_105018, intron 1 of 3) MIRb|SINE|MIR 537 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr22-326 chr22 38034665 38034875 + 25.8 0.000 intron (NM_001301130, intron 5 of 5) intron (NM_001301130, intron 5 of 5) -22485 NM_001039583 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr20-165 chr20 63537776 63537986 + 25.8 0.000 promoter-TSS (NM_005975) promoter-TSS (NM_005975) -505 NM_005975 5753 Hs.51133 NM_005975 ENSG00000101213 PTK6 BRK protein tyrosine kinase 6 protein-coding chr9-531 chr9 87862767 87862977 + 25.8 0.000 Intergenic Intergenic -3816 NR_040117 392364 Hs.689633 NR_040117 LOC392364 - nuclear pore associated protein 1 pseudogene pseudo chr21-65 chr21 32727794 32728004 + 25.8 0.000 promoter-TSS (NM_001160306) promoter-TSS (NM_001160306) 22 NM_001160306 8867 Hs.473632 NM_003895 ENSG00000159082 SYNJ1 EIEE53|INPP5G|PARK20 synaptojanin 1 protein-coding chr9-656 chr9 132288467 132288677 + 25.8 0.000 exon (NM_001351528, exon 16 of 27) exon (NM_001351528, exon 16 of 27) 66284 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr16-496 chr16 89443080 89443290 + 25.8 0.000 intron (NR_110932, intron 1 of 2) AluSz|SINE|Alu 12267 NR_110932 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr1-921 chr1 65255299 65255509 + 25.8 0.000 Intergenic L2c|LINE|L2 -9290 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr12-291 chr12 12891349 12891559 + 25.8 0.000 5' UTR (NM_003979, exon 1 of 4) 5' UTR (NM_003979, exon 1 of 4) 432 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr11-735 chr11 10735787 10735997 + 25.8 0.000 Intergenic Intergenic -15354 NM_014633 9646 Hs.725151 NM_014633 ENSG00000198730 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding chr4-273 chr4 57119221 57119431 + 25.8 0.000 intron (NR_034081, intron 1 of 4) intron (NR_034081, intron 1 of 4) -8941 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr13-215 chr13 52609348 52609558 + 25.8 0.000 Intergenic Intergenic -8072 NM_001011724 144983 Hs.447506 NM_001011724 ENSG00000139675 HNRNPA1L2 - heterogeneous nuclear ribonucleoprotein A1 like 2 protein-coding chr5-196 chr5 150155726 150155936 + 25.8 0.000 promoter-TSS (NM_001355017) promoter-TSS (NM_001355017) 14 NM_001355016 5159 Hs.509067 NM_002609 ENSG00000113721 PDGFRB CD140B|IBGC4|IMF1|JTK12|KOGS|PDGFR|PDGFR-1|PDGFR1|PENTT platelet derived growth factor receptor beta protein-coding chr2-815 chr2 239113239 239113449 + 25.8 0.000 intron (NM_006037, intron 13 of 26) (AGC)n|Simple_repeat|Simple_repeat -27418 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr7-458 chr7 6226190 6226400 + 25.8 0.000 intron (NM_001367581, intron 1 of 13) intron (NM_001367581, intron 1 of 13) 46329 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr1-844 chr1 177927164 177927374 + 25.8 0.000 Intergenic Intergenic 42653 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr2-1215 chr2 233487264 233487474 + 25.8 0.000 intron (NM_001365479, intron 28 of 31) L1M5|LINE|L1 78204 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr13-103 chr13 99200765 99200975 + 25.8 0.000 promoter-TSS (NM_001144072) promoter-TSS (NM_001144072) 16 NM_177967 337867 Hs.508545 NM_177967 ENSG00000134882 UBAC2 PHGDHL1 UBA domain containing 2 protein-coding chr4-338 chr4 158810777 158810987 + 25.8 0.000 intron (NM_001366843, intron 1 of 17) intron (NM_001366843, intron 1 of 17) 5043 NM_001323916 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr14-379 chr14 102028777 102028987 + 25.8 0.000 intron (NM_001376, intron 48 of 77) MER58A|DNA|hAT-Charlie 58162 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr16-364 chr16 67183730 67183940 + 25.8 0.000 TTS (NM_178516) TTS (NM_178516) 128 NM_001369681 653319 Hs.651201 NM_001040715 ENSG00000196123 KIAA0895L - KIAA0895 like protein-coding chr17-520 chr17 63433653 63433863 + 25.8 0.000 3' UTR (NM_001330421, exon 6 of 6) 3' UTR (NM_001330421, exon 6 of 6) 6509 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr10-353 chr10 102169615 102169825 + 25.8 0.000 Intergenic AluYk3|SINE|Alu 17331 NM_001284389 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding chr12-430 chr12 71557023 71557233 + 25.8 0.000 intron (NR_110596, intron 6 of 19) intron (NR_110596, intron 6 of 19) 106720 NM_144982 196441 Hs.245798 NM_144982 ENSG00000133858 ZFC3H1 CCDC131|CSRC2|PSRC2 zinc finger C3H1-type containing protein-coding chr5-649 chr5 147554343 147554553 + 25.8 0.000 Intergenic Intergenic -5546 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA chr6-298 chr6 1952738 1952948 + 25.8 0.000 intron (NM_001253846, intron 6 of 10) intron (NM_001253846, intron 6 of 10) 223148 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr4-276 chr4 107720315 107720525 + 25.7 0.000 promoter-TSS (NM_005443) promoter-TSS (NM_005443) -186 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr22-155 chr22 31944222 31944432 + 25.7 0.000 promoter-TSS (NM_003405) promoter-TSS (NM_003405) -208 NM_003405 7533 Hs.226755 NM_003405 ENSG00000128245 YWHAH YWHA1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta protein-coding chr1-820 chr1 113110227 113110437 + 25.7 0.000 exon (NM_001312686, exon 14 of 19) exon (NM_001312686, exon 14 of 19) 37134 NM_001312686 9860 Hs.448972 NM_014813 ENSG00000198799 LRIG2 LIG-2|LIG2|UFS2 leucine rich repeats and immunoglobulin like domains 2 protein-coding chr19-645 chr19 3606905 3607115 + 25.7 0.000 promoter-TSS (NM_201636) promoter-TSS (NM_201636) -135 NM_201636 6915 Hs.442530 NM_001060 ENSG00000006638 TBXA2R BDPLT13|TXA2-R thromboxane A2 receptor protein-coding chr2-186 chr2 120252670 120252880 + 25.7 0.000 promoter-TSS (NM_002881) promoter-TSS (NM_002881) -77 NM_002881 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr7-544 chr7 102045085 102045295 + 25.7 0.000 intron (NM_001913, intron 3 of 22) intron (NM_001913, intron 3 of 22) 227564 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr1-567 chr1 64834889 64835099 + 25.7 0.000 intron (NM_002227, intron 24 of 24) intron (NM_002227, intron 24 of 24) 89919 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr16-317 chr16 53098944 53099154 + 25.7 0.000 intron (NM_025134, intron 1 of 38) intron (NM_025134, intron 1 of 38) -31963 NM_001352127 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr2-341 chr2 37324915 37325125 + 25.7 0.000 Intergenic CpG -7936 NM_005813 23683 Hs.660757 NM_005813 ENSG00000115825 PRKD3 EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU protein kinase D3 protein-coding chr4-113 chr4 170026359 170026569 + 25.7 0.000 promoter-TSS (NM_001301647) promoter-TSS (NM_001301647) -69 NM_021647 9848 Hs.593942 NM_021647 ENSG00000198948 MFAP3L NYD-sp9 microfibril associated protein 3 like protein-coding chr5-292 chr5 154038794 154039004 + 25.7 0.000 promoter-TSS (NM_005927) promoter-TSS (NM_005927) 11 NM_001317995 10827 Hs.166551 NM_018691 ENSG00000055147 FAM114A2 133K02|C5orf3 family with sequence similarity 114 member A2 protein-coding chr11-238 chr11 69675371 69675581 + 25.7 0.000 promoter-TSS (NM_153451) promoter-TSS (NM_153451) -123 NM_153451 220064 Hs.667996 NM_153451 ENSG00000149716 LTO1 CIAB1|ORAOV1|TAOS1 LTO1 maturation factor of ABCE1 protein-coding chr9-665 chr9 25724466 25724676 + 25.7 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger -45713 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr13-231 chr13 98571211 98571421 + 25.7 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) 5835 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr21-26 chr21 43719038 43719248 + 25.7 0.000 promoter-TSS (NM_003681) promoter-TSS (NM_003681) 14 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr20-289 chr20 34452401 34452611 + 25.7 0.000 intron (NM_001257137, intron 13 of 25) intron (NM_001257137, intron 13 of 25) -13819 NR_030374 693229 NR_030374 ENSG00000207997 MIR644A MIR644|MIRN644|hsa-mir-644|hsa-mir-644a microRNA 644a ncRNA chr1-584 chr1 46604176 46604386 + 25.7 0.000 promoter-TSS (NM_003684) promoter-TSS (NM_003684) -13 NR_024174 8569 Hs.371594 NM_003684 ENSG00000079277 MKNK1 MNK1 MAPK interacting serine/threonine kinase 1 protein-coding chr15-296 chr15 69468466 69468676 + 25.7 0.000 Intergenic Intergenic 15753 NM_001003 6176 Hs.356502 NM_001003 ENSG00000137818 RPLP1 LP1|P1|RPP1 ribosomal protein lateral stalk subunit P1 protein-coding chr12-646 chr12 32032633 32032843 + 25.7 0.000 Intergenic L2c|LINE|L2 73323 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 RESF1 C12orf35|GET|KIAA1551|UTA2-1 retroelement silencing factor 1 protein-coding chr16-337 chr16 54929053 54929263 + 25.7 0.000 promoter-TSS (NR_034105) promoter-TSS (NR_034105) 31 NR_110453 643911 Hs.237396 NM_001308963 CRNDE CRNDEP|LINC00180|NCRNA00180|PNAS-108|lincIRX5 colorectal neoplasia differentially expressed protein-coding chr1-761 chr1 46348096 46348306 + 25.7 0.000 intron (NM_001256127, intron 3 of 5) intron (NM_001256127, intron 3 of 5) 7023 NM_001256128 387338 Hs.163424 NM_199044 ENSG00000117481 NSUN4 SHTAP NOP2/Sun RNA methyltransferase 4 protein-coding chr10-456 chr10 46030472 46030682 + 25.7 0.000 5' UTR (NM_001145263, exon 1 of 10) 5' UTR (NM_001145263, exon 1 of 10) 137 NM_001145260 8031 Hs.643658 NM_005437 ENSG00000266412 NCOA4 ARA70|ELE1|PTC3|RFG nuclear receptor coactivator 4 protein-coding chr13-182 chr13 112545911 112546121 + 25.7 0.000 TTS (NM_001286279) TTS (NM_001286279) 42137 NM_006322 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr6-296 chr6 157022173 157022383 + 25.7 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -14149 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr13-85 chr13 113122698 113122908 + 25.7 0.000 promoter-TSS (NM_001312674) promoter-TSS (NM_001312674) 4 NM_001312675 2159 Hs.361463 NM_000504 ENSG00000126218 F10 FX|FXA coagulation factor X protein-coding chr8-95 chr8 41309356 41309566 + 25.7 0.000 promoter-TSS (NM_003012) promoter-TSS (NM_003012) 12 NM_003012 6422 Hs.213424 NM_003012 ENSG00000104332 SFRP1 FRP|FRP-1|FRP1|FrzA|SARP2 secreted frizzled related protein 1 protein-coding chr11-1050 chr11 46216147 46216357 + 25.7 0.000 Intergenic MIR3|SINE|MIR 44297 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chr7-403 chr7 141014855 141015065 + 25.7 0.000 promoter-TSS (NM_016071) promoter-TSS (NM_016071) -8 NM_053035 51650 Hs.416207 NM_016071 ENSG00000090263 MRPS33 CGI-139|MRP-S33|PTD003|S33mt mitochondrial ribosomal protein S33 protein-coding chr9-634 chr9 124285086 124285296 + 25.7 0.000 intron (NM_001166168, intron 1 of 9) intron (NM_001166168, intron 1 of 9) -6780 NM_001166171 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr10-279 chr10 86400002 86400212 + 25.7 0.000 Intergenic CpG -33312 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr10-418 chr10 97869415 97869625 + 25.7 0.000 3' UTR (NM_001010917, exon 5 of 5) 3' UTR (NM_001010917, exon 5 of 5) 6377 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr5-370 chr5 39100963 39101173 + 25.7 0.000 Intergenic LTR33|LTR|ERVL -26669 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr8-627 chr8 22388653 22388863 + 25.7 0.000 intron (NM_001351656, intron 2 of 10) intron (NM_001351656, intron 2 of 10) -4078 NM_001351660 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr14-377 chr14 89813747 89813957 + 25.7 0.000 intron (NM_001284269, intron 5 of 5) intron (NM_001284269, intron 5 of 5) 140684 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr11-938 chr11 95254287 95254497 + 25.7 0.000 Intergenic Intergenic -21917 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr4-439 chr4 1053198 1053408 + 25.7 0.000 Intergenic Intergenic 40839 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr3-1143 chr3 46335288 46335498 + 25.7 0.000 Intergenic Intergenic -18351 NM_001123041 729230 Hs.511794 NM_001123041 ENSG00000121807 CCR2 CC-CKR-2|CCR-2|CCR2A|CCR2B|CD192|CKR2|CKR2A|CKR2B|CMKBR2|MCP-1-R C-C motif chemokine receptor 2 protein-coding chr3-303 chr3 197960276 197960486 + 25.7 0.000 promoter-TSS (NM_032263) promoter-TSS (NM_032263) 164 NR_026786 89782 Hs.518540 NM_033029 ENSG00000185621 LMLN GP63|INV|IX14|LMNL1|MSP leishmanolysin like peptidase protein-coding chr6-456 chr6 149233378 149233588 + 25.7 0.000 intron (NM_001292035, intron 2 of 6) intron (NM_001292035, intron 2 of 6) 15557 NM_001292035 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr2-223 chr2 38377283 38377493 + 25.7 0.000 promoter-TSS (NM_001308076) promoter-TSS (NM_001308076) 35 NM_001330458 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr3-743 chr3 138686855 138687065 + 25.7 0.000 intron (NM_006219, intron 16 of 23) intron (NM_006219, intron 16 of 23) 20661 NM_001256045 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr18-44 chr18 49487054 49487264 + 25.7 0.000 promoter-TSS (NR_031720) promoter-TSS (NR_031720) 75 NM_001199346 497661 Hs.603040 NM_001035005 ENSG00000177576 C18orf32 - chromosome 18 open reading frame 32 protein-coding chr14-210 chr14 103576633 103576843 + 25.7 0.000 intron (NM_001370595, intron 3 of 4) intron (NM_001370595, intron 3 of 4) 13778 NM_001302654 84334 Hs.598441 NM_001302652 ENSG00000256053 COA8 APOP|APOP1|APOPT1|C14orf153 cytochrome c oxidase assembly factor 8 protein-coding chr16-340 chr16 75556126 75556336 + 25.7 0.000 promoter-TSS (NR_074083) promoter-TSS (NR_074083) 21 NM_001077418 79583 Hs.156784 NM_001077416 ENSG00000205084 TMEM231 ALYE870|JBTS20|MKS11|PRO1886 transmembrane protein 231 protein-coding chr9-430 chr9 99221786 99221996 + 25.7 0.000 promoter-TSS (NM_033087) promoter-TSS (NM_033087) 51 NR_024532 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2 alpha-1,3/1,6-mannosyltransferase protein-coding chr1-1245 chr1 151458372 151458582 + 25.7 0.000 intron (NM_001194938, intron 1 of 17) intron (NM_001194938, intron 1 of 17) 1017 NM_001194938 23126 Hs.489873 NM_015100 ENSG00000143442 POGZ MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m pogo transposable element derived with ZNF domain protein-coding chr20-195 chr20 51456512 51456722 + 25.7 0.000 intron (NM_012340, intron 5 of 10) intron (NM_012340, intron 5 of 10) -3640 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr2-712 chr2 111117047 111117257 + 25.7 0.000 intron (NM_001142807, intron 17 of 17) intron (NM_001142807, intron 17 of 17) -1564 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr22-446 chr22 40363143 40363353 + 25.7 0.000 intron (NM_001317923, intron 10 of 12) intron (NM_001317923, intron 10 of 12) -7346 NR_146412 27352 Hs.474914 NM_015705 ENSG00000100359 SGSM3 CIP85|MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5|rabGAPLP small G protein signaling modulator 3 protein-coding chr17-908 chr17 75685591 75685801 + 25.7 0.000 intron (NR_126037, intron 3 of 8) intron (NR_126037, intron 3 of 8) 18358 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr17-392 chr17 30708674 30708884 + 25.7 0.000 promoter-TSS (NR_024187) promoter-TSS (NR_024187) -829 NR_144393 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr12-195 chr12 113358539 113358749 + 25.7 0.000 promoter-TSS (NM_001159727) promoter-TSS (NM_001159727) 57 NM_173542 196463 Hs.115896 NM_173542 ENSG00000151176 PLBD2 P76 phospholipase B domain containing 2 protein-coding chr22-278 chr22 30311490 30311700 + 25.7 0.000 intron (NM_001204240, intron 1 of 8) intron (NM_001204240, intron 1 of 8) 15346 NM_031937 83874 Hs.655273 NM_031937 ENSG00000099992 TBC1D10A EPI64|TBC1D10|dJ130H16.1|dJ130H16.2 TBC1 domain family member 10A protein-coding chr3-193 chr3 11643813 11644023 + 25.7 0.000 promoter-TSS (NM_001128219) promoter-TSS (NM_001128219) -3 NM_001128219 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr1-1473 chr1 64133102 64133312 + 25.7 0.000 intron (NM_005012, intron 4 of 8) L2c|LINE|L2 -19416 NR_110665 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr4-460 chr4 139243486 139243696 + 25.7 0.000 Intergenic Intergenic 36634 NM_032623 84709 Hs.710036 NM_032623 ENSG00000137463 MGARP C4orf49|CESP-1|HUMMR|OSAP mitochondria localized glutamic acid rich protein protein-coding chr1-774 chr1 234600236 234600446 + 25.7 0.000 Intergenic CpG 9184 NM_001077397 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr13-117 chr13 46554629 46554839 + 25.7 0.000 intron (NM_001164213, intron 1 of 18) intron (NM_001164213, intron 1 of 18) 1564 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr12-586 chr12 124774703 124774913 + 25.7 0.000 Intergenic L1ME1|LINE|L1 64863 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr14-404 chr14 65421794 65422004 + 25.7 0.000 intron (NR_038170, intron 1 of 10) Tigger2|DNA|TcMar-Tigger 9169 NR_038170 2530 Hs.597649 NM_004480 ENSG00000033170 FUT8 CDGF|CDGF1 fucosyltransferase 8 protein-coding chr16-431 chr16 569641 569851 + 25.7 0.000 promoter-TSS (NM_004204) promoter-TSS (NM_004204) -222 NM_148920 9091 Hs.741878 NM_004204 ENSG00000007541 PIGQ GPI1|c407A10.1 phosphatidylinositol glycan anchor biosynthesis class Q protein-coding chr5-661 chr5 65062781 65062991 + 25.7 0.000 Intergenic Intergenic 293956 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr11-1456 chr11 77287794 77288004 + 25.7 0.000 intron (NM_182833, intron 1 of 16) MLT1J|LTR|ERVL-MaLR 13767 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr3-441 chr3 47803159 47803369 + 25.7 0.000 intron (NM_001330990, intron 1 of 22) CpG 126 NM_138615 22907 Hs.517948 NM_014966 ENSG00000132153 DHX30 DDX30|NEDMIAL|RETCOR DExH-box helicase 30 protein-coding chr12-524 chr12 57520449 57520659 + 25.7 0.000 promoter-TSS (NM_001195054) promoter-TSS (NM_001195054) -37 NM_004083 1649 Hs.505777 NM_004083 ENSG00000175197 DDIT3 AltDDIT3|C/EBPzeta|CEBPZ|CHOP|CHOP-10|CHOP10|GADD153 DNA damage inducible transcript 3 protein-coding chr8-397 chr8 118332780 118332990 + 25.7 0.000 intron (NM_001101676, intron 4 of 4) L2b|LINE|L2 -221066 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr2-1138 chr2 64114195 64114405 + 25.7 0.000 intron (NM_020651, intron 1 of 6) intron (NM_020651, intron 1 of 6) 30120 NM_020651 57162 Hs.7886 NM_020651 ENSG00000197329 PELI1 - pellino E3 ubiquitin protein ligase 1 protein-coding chr2-855 chr2 42906871 42907081 + 25.7 0.000 Intergenic Intergenic -114393 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr9-570 chr9 34178859 34179069 + 25.7 0.000 promoter-TSS (NM_001171204) promoter-TSS (NM_001171204) -41 NM_001171202 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr1-483 chr1 85607264 85607474 + 25.7 0.000 Intergenic Intergenic 26608 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chrX-166 chrX 84501770 84501980 + 25.7 0.000 intron (NM_001177478, intron 1 of 9) intron (NM_001177478, intron 1 of 9) 578 NM_001177479 139324 Hs.559546 NM_144657 ENSG00000165259 HDX CXorf43|D030011N01Rik highly divergent homeobox protein-coding chr5-622 chr5 120479159 120479369 + 25.7 0.000 intron (NM_001308087, intron 1 of 1) intron (NM_001308087, intron 1 of 1) 13633 NM_001308087 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr6-54 chr6 292212 292422 + 25.6 0.000 non-coding (NR_104473, exon 1 of 6) non-coding (NR_104473, exon 1 of 6) 260 NM_001286555 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr1-977 chr1 85330932 85331142 + 25.6 0.000 intron (NM_001134445, intron 5 of 6) intron (NM_001134445, intron 5 of 6) -54405 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr11-778 chr11 66022587 66022797 + 25.6 0.000 intron (NM_053054, intron 2 of 11) CpG 3787 NM_053054 117144 Hs.189105 NM_053054 ENSG00000175294 CATSPER1 CATSPER|SPGF7 cation channel sperm associated 1 protein-coding chr3-223 chr3 52239149 52239359 + 25.6 0.000 promoter-TSS (NM_007284) promoter-TSS (NM_007284) 16 NR_135307 101929054 Hs.281931 NR_135307 ENSG00000243224 LOC101929054 - uncharacterized LOC101929054 ncRNA chr1-514 chr1 230642319 230642529 + 25.6 0.000 promoter-TSS (NM_001145036) promoter-TSS (NM_001145036) -57 NM_001145036 22796 Hs.211800 NM_007357 ENSG00000135775 COG2 CDG2Q|LDLC component of oligomeric golgi complex 2 protein-coding chr14-129 chr14 100192952 100193162 + 25.6 0.000 Intergenic CpG -33412 NM_206918 123099 Hs.159643 NM_206918 ENSG00000168350 DEGS2 C14orf66|DES2|FADS8 delta 4-desaturase, sphingolipid 2 protein-coding chr11-939 chr11 95836046 95836256 + 25.6 0.000 exon (NM_201278, exon 16 of 17) exon (NM_201278, exon 16 of 17) 45653 NM_014679 9702 Hs.101014 NM_014679 ENSG00000166037 CEP57 MVA2|PIG8|TSP57 centrosomal protein 57 protein-coding chr1-1004 chr1 44926447 44926657 + 25.6 0.000 intron (NM_001166588, intron 5 of 9) intron (NM_001166588, intron 5 of 9) 60043 NM_020365 8891 Hs.533549 NM_020365 ENSG00000070785 EIF2B3 EIF-2B|EIF2Bgamma eukaryotic translation initiation factor 2B subunit gamma protein-coding chr10-253 chr10 119080108 119080318 + 25.6 0.000 intron (NM_003750, intron 1 of 21) CpG 604 NM_003750 8661 Hs.523299 NM_003750 ENSG00000107581 EIF3A EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 eukaryotic translation initiation factor 3 subunit A protein-coding chr20-268 chr20 32368928 32369138 + 25.6 0.000 exon (NM_001363734, exon 3 of 11) exon (NM_001363734, exon 3 of 11) 9968 NM_001363734 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chr2-1007 chr2 225354389 225354599 + 25.6 0.000 Intergenic Intergenic -45216 NM_001371273 chr3-319 chr3 56557155 56557365 + 25.6 0.000 promoter-TSS (NM_001141947) promoter-TSS (NM_001141947) 85 NM_001141947 285331 Hs.476399 NM_001012506 ENSG00000180376 CCDC66 - coiled-coil domain containing 66 protein-coding chr8-181 chr8 143936415 143936625 + 25.6 0.000 intron (NM_201379, intron 5 of 31) intron (NM_201379, intron 5 of 31) 3077 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr2-1105 chr2 108853518 108853728 + 25.6 0.000 intron (NM_001351549, intron 12 of 13) AluJo|SINE|Alu 66852 NR_147236 165055 Hs.362702 NM_144978 ENSG00000163006 CCDC138 - coiled-coil domain containing 138 protein-coding chr11-860 chr11 78257004 78257214 + 25.6 0.000 intron (NM_012296, intron 2 of 9) intron (NM_012296, intron 2 of 9) 68190 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr16-435 chr16 65070970 65071180 + 25.6 0.000 intron (NM_001330576, intron 1 of 11) intron (NM_001330576, intron 1 of 11) 50988 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr19-605 chr19 1469262 1469472 + 25.6 0.000 exon (NM_001351273, exon 14 of 14) exon (NM_001351273, exon 14 of 14) 9848 NM_152482 148223 Hs.532840 NM_152482 ENSG00000119559 C19orf25 - chromosome 19 open reading frame 25 protein-coding chrX-44 chrX 154762691 154762901 + 25.6 0.000 promoter-TSS (NM_001142463) promoter-TSS (NM_001142463) 54 NM_001288747 1736 Hs.4747 NM_001363 ENSG00000130826 DKC1 CBF5|DKC|DKCX|NAP57|NOLA4|XAP101 dyskerin pseudouridine synthase 1 protein-coding chr6-221 chr6 147621370 147621580 + 25.6 0.000 Intergenic Intergenic 112785 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr1-430 chr1 148152166 148152376 + 25.6 0.000 promoter-TSS (NR_110864) promoter-TSS (NR_110864) 10 NM_183372 200030 Hs.721588 NM_183372 ENSG00000263956 NBPF11 NBPF24 NBPF member 11 protein-coding chr1-475 chr1 51878595 51878805 + 25.6 0.000 promoter-TSS (NM_001242361) promoter-TSS (NM_001242361) 237 NM_002525 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr16-294 chr16 70686175 70686385 + 25.6 0.000 promoter-TSS (NM_138383) promoter-TSS (NM_138383) -227 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr12-396 chr12 121861869 121862079 + 25.6 0.000 intron (NM_001171993, intron 2 of 15) AluJo|SINE|Alu -3115 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr3-575 chr3 133547629 133547839 + 25.6 0.000 Intergenic MSTA|LTR|ERVL-MaLR -25952 NM_001134422 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr13-390 chr13 34926586 34926796 + 25.6 0.000 Intergenic Intergenic -15596 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr5-588 chr5 121969195 121969405 + 25.6 0.000 intron (NM_152546, intron 1 of 7) MamRep605|LTR?|LTR? 7325 NM_152546 153443 Hs.107622 NM_152546 ENSG00000151304 SRFBP1 BUD22|P49|Rlb1|STRAP|p49/STRAP serum response factor binding protein 1 protein-coding chr4-351 chr4 7102050 7102260 + 25.6 0.000 intron (NR_027441, intron 1 of 1) intron (NR_027441, intron 1 of 1) 1221 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr8-292 chr8 129708021 129708231 + 25.6 0.000 Intergenic MER45B|DNA|hAT-Tip100 -27887 NR_130917 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr9-589 chr9 35511060 35511270 + 25.6 0.000 intron (NM_001330740, intron 1 of 10) intron (NM_001330740, intron 1 of 10) 21054 NM_014806 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr19-680 chr19 43765352 43765562 + 25.6 0.000 Intergenic Intergenic -10495 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr8-333 chr8 39038254 39038464 + 25.6 0.000 intron (NR_027638, intron 11 of 20) L2a|LINE|L2 -19674 NR_145988 109616979 NR_145736 ENSG00000207199 SNORD38D - small nucleolar RNA, C/D box 38D snoRNA chr6-233 chr6 145964381 145964591 + 25.6 0.000 promoter-TSS (NM_173082) promoter-TSS (NM_173082) -128 NM_001370328 257218 Hs.723297 NM_173082 ENSG00000146414 SHPRH bA545I5.2 SNF2 histone linker PHD RING helicase protein-coding chr5-712 chr5 81825328 81825538 + 25.6 0.000 Intergenic Intergenic -74180 NM_001256732 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr2-1208 chr2 216775171 216775381 + 25.6 0.000 Intergenic Intergenic -79727 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr3-805 chr3 16130026 16130236 + 25.6 0.000 Intergenic Intergenic -44549 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr13-332 chr13 98557953 98558163 + 25.6 0.000 intron (NM_001032296, intron 1 of 10) L2c|LINE|L2 19093 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr12-548 chr12 111753300 111753510 + 25.6 0.000 intron (NM_025247, intron 18 of 20) intron (NM_025247, intron 18 of 20) -13528 NM_000690 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr3-787 chr3 114624876 114625086 + 25.6 0.000 promoter-TSS (NM_001164347) promoter-TSS (NM_001164347) -36 NM_001164346 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr3-769 chr3 155979762 155979972 + 25.6 0.000 Intergenic Tigger3|DNA|TcMar-Tigger 109217 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr10-439 chr10 131900603 131900813 + 25.6 0.000 promoter-TSS (NM_001291310) promoter-TSS (NM_001291310) -300 NM_018461 55844 Hs.380372 NM_018461 ENSG00000175470 PPP2R2D B55D|B55delta|MDS026 protein phosphatase 2 regulatory subunit Bdelta protein-coding chr20-362 chr20 19964590 19964800 + 25.6 0.000 intron (NM_001242581, intron 5 of 11) intron (NM_001242581, intron 5 of 11) -52595 NM_181528 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr1-942 chr1 10074467 10074677 + 25.6 0.000 intron (NM_006048, intron 2 of 26) L2a|LINE|L2 41614 NM_006048 10277 Hs.593974 NM_006048 ENSG00000130939 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding chr16-202 chr16 88706252 88706462 + 25.6 0.000 promoter-TSS (NM_001012759) promoter-TSS (NM_001012759) 51 NM_001171815 115992 Hs.513804 NM_178841 ENSG00000158717 RNF166 - ring finger protein 166 protein-coding chr6-334 chr6 42013020 42013230 + 25.6 0.000 intron (NM_001136017, intron 1 of 4) L3|LINE|CR1 35769 NM_001136126 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr19-962 chr19 18951782 18951992 + 25.6 0.000 Intergenic L2c|LINE|L2 -10670 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr7-570 chr7 22561349 22561559 + 25.6 0.000 Intergenic Intergenic -1883 NR_038393 100506178 Hs.668122 NR_038393 ENSG00000232759 LOC100506178 - uncharacterized LOC100506178 ncRNA chr14-490 chr14 83164055 83164265 + 25.6 0.000 Intergenic MER44B|DNA|TcMar-Tigger 521528 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr16-467 chr16 75116749 75116959 + 25.6 0.000 promoter-TSS (NM_153486) promoter-TSS (NM_153486) -82 NM_153486 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr6-497 chr6 44667297 44667507 + 25.6 0.000 Intergenic Intergenic -115521 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr12-373 chr12 110614001 110614211 + 25.6 0.000 promoter-TSS (NM_001082537) promoter-TSS (NM_001082537) -23 NM_001319680 79600 Hs.211511 NM_024549 ENSG00000204852 TCTN1 JBTS13|TECT1 tectonic family member 1 protein-coding chr19-547 chr19 984195 984405 + 25.6 0.000 promoter-TSS (NM_024100) promoter-TSS (NM_024100) -28 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr12-119 chr12 25251067 25251277 + 25.6 0.000 promoter-TSS (NM_033360) promoter-TSS (NM_033360) -243 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr15-149 chr15 63048211 63048421 + 25.6 0.000 promoter-TSS (NM_001365782) promoter-TSS (NM_001365782) -173 NM_001365781 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr11-439 chr11 8964496 8964706 + 25.6 0.000 promoter-TSS (NR_073431) promoter-TSS (NR_073431) -74 NR_073431 493900 Hs.591981 NR_073431 ENSG00000254860 TMEM9B-AS1 C11orf18 TMEM9B antisense RNA 1 ncRNA chr8-301 chr8 23330597 23330807 + 25.6 0.000 intron (NM_002318, intron 5 of 13) intron (NM_002318, intron 5 of 13) -5506 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr1-782 chr1 12478236 12478446 + 25.6 0.000 intron (NM_015378, intron 67 of 69) intron (NM_015378, intron 67 of 69) -28905 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr1-1092 chr1 66563438 66563648 + 25.6 0.000 intron (NM_001350218, intron 1 of 22) intron (NM_001350218, intron 1 of 22) 29390 NM_001350217 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr5-525 chr5 8829312 8829522 + 25.6 0.000 Intergenic L1PB3|LINE|L1 -10315 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr16-423 chr16 75148259 75148469 + 25.6 0.000 promoter-TSS (NM_153688).2 promoter-TSS (NM_153688).2 -160 NM_001318472 162239 Hs.388813 NM_153688 ENSG00000184517 ZFP1 ZNF475 ZFP1 zinc finger protein protein-coding chr8-306 chr8 67339449 67339659 + 25.6 0.000 intron (NM_006421, intron 1 of 38) intron (NM_006421, intron 1 of 38) 4227 NM_006421 10565 Hs.656902 NM_006421 ENSG00000066777 ARFGEF1 ARFGEP1|BIG1|P200 ADP ribosylation factor guanine nucleotide exchange factor 1 protein-coding chr16-676 chr16 86609228 86609438 + 25.6 0.000 Intergenic MER113|DNA|hAT-Charlie 30824 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr2-400 chr2 219497986 219498196 + 25.6 0.000 promoter-TSS (NM_013335) promoter-TSS (NM_013335) -800 NM_013335 29926 Hs.27059 NM_013335 ENSG00000144591 GMPPA AAMR GDP-mannose pyrophosphorylase A protein-coding chr19-809 chr19 34475157 34475367 + 25.6 0.000 Intergenic Intergenic -6496 NM_001080436 126374 Hs.585010 NM_001080436 ENSG00000142279 WTIP - WT1 interacting protein protein-coding chr9-692 chr9 127525552 127525762 + 25.6 0.000 intron (NM_022833, intron 3 of 13) intron (NM_022833, intron 3 of 13) 43416 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr9-332 chr9 124252089 124252299 + 25.6 0.000 Intergenic Intergenic -5412 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr22-207 chr22 30802722 30802932 + 25.6 0.000 intron (NM_001282740, intron 1 of 12) CpG -19689 NM_001282741 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr11-1075 chr11 80103619 80103829 + 25.6 0.000 Intergenic Intergenic 659079 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr19-559 chr19 57351082 57351292 + 25.6 0.000 promoter-TSS (NM_001290319) promoter-TSS (NM_001290319) -87 NM_001329456 57343 Hs.287374 NM_020657 ENSG00000131845 ZNF304 - zinc finger protein 304 protein-coding chr16-942 chr16 65024929 65025139 + 25.6 0.000 intron (NM_001797, intron 2 of 12) intron (NM_001797, intron 2 of 12) 97029 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr12-129 chr12 120686922 120687132 + 25.6 0.000 promoter-TSS (NM_001303628) promoter-TSS (NM_001303628) -122 NM_001303628 9761 Hs.744910 NM_014730 ENSG00000110917 MLEC KIAA0152 malectin protein-coding chr7-621 chr7 2110408 2110618 + 25.6 0.000 intron (NM_001013837, intron 11 of 18) L3|LINE|CR1 -21461 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr15-211 chr15 78004978 78005188 + 25.6 0.000 intron (NM_144572, intron 10 of 12) intron (NM_144572, intron 10 of 12) -10858 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr4-271 chr4 24105775 24105985 + 25.6 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) -215833 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr16-527 chr16 49639955 49640165 + 25.5 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) 24264 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr8-251 chr8 13566704 13566914 + 25.5 0.000 promoter-TSS (NM_001007090) promoter-TSS (NM_001007090) -60 NM_001007090 157773 Hs.104941 NM_001007090 ENSG00000164743 C8orf48 - chromosome 8 open reading frame 48 protein-coding chr16-254 chr16 75647680 75647890 + 25.5 0.000 promoter-TSS (NM_005548) promoter-TSS (NM_005548) 12 NM_018975 54386 Hs.301419 NM_018975 ENSG00000166848 TERF2IP DRIP5|RAP1 TERF2 interacting protein protein-coding chr8-500 chr8 99799253 99799463 + 25.5 0.000 intron (NM_017890, intron 43 of 61) intron (NM_017890, intron 43 of 61) 94349 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr19-595 chr19 45405736 45405946 + 25.5 0.000 promoter-TSS (NM_001297590) promoter-TSS (NM_001297590) 520 NM_001142502 10848 Hs.466937 NM_006663 ENSG00000104881 PPP1R13L IASPP|NKIP1|RAI|RAI4 protein phosphatase 1 regulatory subunit 13 like protein-coding chr4-308 chr4 139266682 139266892 + 25.5 0.000 exon (NM_032623, exon 4 of 4) exon (NM_032623, exon 4 of 4) 13438 NM_032623 84709 Hs.710036 NM_032623 ENSG00000137463 MGARP C4orf49|CESP-1|HUMMR|OSAP mitochondria localized glutamic acid rich protein protein-coding chr22-295 chr22 41028834 41029044 + 25.5 0.000 Intergenic ERVL-E-int|LTR|ERVL 44782 NR_132979 106635682 NR_132979 SNORD140 - small nucleolar RNA, C/D box 140 snoRNA chr1-1301 chr1 15200676 15200886 + 25.5 0.000 intron (NR_135082, intron 1 of 2) UCON80_AMi|Unknown|Unknown -29157 NM_001278501 727684 Hs.667584 NM_001278501 C1orf195 - chromosome 1 open reading frame 195 protein-coding chr1-1466 chr1 31038419 31038629 + 25.5 0.000 intron (NM_001020658, intron 2 of 21) intron (NM_001020658, intron 2 of 21) 27193 NM_014676 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr10-359 chr10 89643910 89644120 + 25.5 0.000 promoter-TSS (NM_148978) promoter-TSS (NM_148978) -99 NM_148978 53354 Hs.163555 NM_138316 ENSG00000152782 PANK1 PANK pantothenate kinase 1 protein-coding chr11-672 chr11 69443376 69443586 + 25.5 0.000 Intergenic CpG 17826 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr3-705 chr3 113626849 113627059 + 25.5 0.000 intron (NR_136285, intron 20 of 20) intron (NR_136285, intron 20 of 20) 32078 NR_039648 100616476 NR_039648 ENSG00000265253 MIR4446 mir-4446 microRNA 4446 ncRNA chr10-636 chr10 108358895 108359105 + 25.5 0.000 Intergenic Intergenic -289707 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr5-894 chr5 151660738 151660948 + 25.5 0.000 TTS (NM_003118) TTS (NM_003118) -16102 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr9-609 chr9 134294147 134294357 + 25.5 0.000 non-coding (NR_146518, exon 2 of 2) non-coding (NR_146518, exon 2 of 2) 1145 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr18-206 chr18 61817166 61817376 + 25.5 0.000 intron (NM_173557, intron 1 of 1) intron (NM_173557, intron 1 of 1) 69095 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr7-426 chr7 100119360 100119570 + 25.5 0.000 promoter-TSS (NM_001365001) promoter-TSS (NM_001365001) -107 NM_001364998 6878 Hs.489309 NM_005641 ENSG00000106290 TAF6 ALYUS|MGC:8964|TAF(II)70|TAF(II)80|TAF2E|TAFII-70|TAFII-80|TAFII70|TAFII80|TAFII85 TATA-box binding protein associated factor 6 protein-coding chr2-849 chr2 25618130 25618340 + 25.5 0.000 intron (NM_033147, intron 4 of 19) intron (NM_033147, intron 4 of 19) 31987 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr1-544 chr1 156282613 156282823 + 25.5 0.000 promoter-TSS (NR_026678) promoter-TSS (NR_026678) 107 NM_015327 23381 Hs.516837 NM_015327 ENSG00000198952 SMG5 EST1B|LPTS-RP1|LPTSRP1|SMG-5 SMG5 nonsense mediated mRNA decay factor protein-coding chr11-498 chr11 68354142 68354352 + 25.5 0.000 intron (NM_002335, intron 2 of 22) intron (NM_002335, intron 2 of 22) 41656 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr3-880 chr3 190077172 190077382 + 25.5 0.000 intron (NM_001134418, intron 1 of 14) intron (NM_001134418, intron 1 of 14) 43620 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr12-404 chr12 54300907 54301117 + 25.5 0.000 promoter-TSS (NM_001136023) promoter-TSS (NM_001136023) 3 NM_001136023 4778 Hs.75643 NM_006163 ENSG00000123405 NFE2 NF-E2|p45 nuclear factor, erythroid 2 protein-coding chr4-240 chr4 76213754 76213964 + 25.5 0.000 promoter-TSS (NM_005506) promoter-TSS (NM_005506) -35 NM_005506 950 Hs.349656 NM_005506 ENSG00000138760 SCARB2 AMRF|CD36L2|EPM4|HLGP85|LGP85|LIMP-2|LIMPII|SR-BII scavenger receptor class B member 2 protein-coding chr11-745 chr11 72773320 72773530 + 25.5 0.000 intron (NM_006645, intron 2 of 6) intron (NM_006645, intron 2 of 6) -10105 NR_039841 100616410 NR_039841 ENSG00000265064 MIR4692 - microRNA 4692 ncRNA chr1-986 chr1 175029766 175029976 + 25.5 0.000 Intergenic Intergenic -6416 NR_037606 63931 Hs.654858 NM_022100 ENSG00000120333 MRPS14 COXPD38|DJ262D12.2|HSMRPS14|MRP-S14|S14mt mitochondrial ribosomal protein S14 protein-coding chr19-897 chr19 33348813 33349023 + 25.5 0.000 Intergenic Intergenic -24791 NM_001806 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr6-370 chr6 44100161 44100371 + 25.5 0.000 Intergenic Intergenic -25614 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr9-516 chr9 109098725 109098935 + 25.5 0.000 intron (NM_032012, intron 3 of 17) intron (NM_032012, intron 3 of 17) 21117 NM_032012 23731 Hs.308074 NM_032012 ENSG00000106771 TMEM245 C9orf5|CG-2|CG2 transmembrane protein 245 protein-coding chr3-776 chr3 25592639 25592849 + 25.5 0.000 intron (NR_110893, intron 5 of 6) intron (NR_110893, intron 5 of 6) 71628 NM_001068 7155 Hs.475733 NM_001068 ENSG00000077097 TOP2B TOPIIB|top2beta DNA topoisomerase II beta protein-coding chr3-355 chr3 39151075 39151285 + 25.5 0.000 intron (NM_001320560, intron 1 of 4) intron (NM_001320560, intron 1 of 4) 2411 NM_033027 64651 Hs.370950 NM_033027 ENSG00000144655 CSRNP1 AXUD1|CSRNP-1|FAM130B|TAIP-3|URAX1 cysteine and serine rich nuclear protein 1 protein-coding chr2-810 chr2 159124544 159124754 + 25.5 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -62186 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr14-214 chr14 59098512 59098722 + 25.5 0.000 Intergenic Intergenic -90050 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr13-121 chr13 102799031 102799241 + 25.5 0.000 promoter-TSS (NM_017693) promoter-TSS (NM_017693) 17 NM_017693 54841 Hs.288809 NM_017693 ENSG00000134897 BIVM - basic, immunoglobulin-like variable motif containing protein-coding chr2-571 chr2 197435111 197435321 + 25.5 0.000 promoter-TSS (NM_012433) promoter-TSS (NM_012433) -123 NM_001005526 23451 Hs.632554 NM_012433 ENSG00000115524 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b subunit 1 protein-coding chr12-351 chr12 121124472 121124682 + 25.5 0.000 Intergenic Intergenic -8299 NR_033956 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr6-400 chr6 16320030 16320240 + 25.5 0.000 intron (NM_000332, intron 8 of 8) intron (NM_000332, intron 8 of 8) 81548 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr17-710 chr17 61338076 61338286 + 25.5 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 29523 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr1-1171 chr1 151238439 151238649 + 25.5 0.000 intron (NM_001135637, intron 9 of 13) intron (NM_001135637, intron 9 of 13) -16190 NM_001330692 5710 Hs.505059 NM_002810 ENSG00000159352 PSMD4 AF|AF-1|ASF|MCB1|Rpn10|S5A|pUB-R5 proteasome 26S subunit, non-ATPase 4 protein-coding chr16-452 chr16 69276186 69276396 + 25.5 0.000 intron (NM_006750, intron 4 of 6) intron (NM_006750, intron 4 of 6) -35059 NM_013245 27183 Hs.128420 NM_013245 ENSG00000132612 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A protein-coding chr3-790 chr3 124351680 124351890 + 25.5 0.000 intron (NM_001024660, intron 10 of 59) intron (NM_001024660, intron 10 of 59) -22547 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr2-866 chr2 201467769 201467979 + 25.5 0.000 intron (NM_018571, intron 3 of 11) L3|LINE|CR1 16134 NM_018571 55437 Hs.652338 NM_018571 ENSG00000082146 STRADB ALS2CR2|CALS-21|ILPIP|ILPIPA|PAPK|PRO1038 STE20 related adaptor beta protein-coding chr17-453 chr17 81471190 81471400 + 25.5 0.000 Intergenic Intergenic -20107 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr12-358 chr12 71663772 71663982 + 25.5 0.000 promoter-TSS (NM_031435) promoter-TSS (NM_031435) -29 NM_144982 196441 Hs.245798 NM_144982 ENSG00000133858 ZFC3H1 CCDC131|CSRC2|PSRC2 zinc finger C3H1-type containing protein-coding chr6-244 chr6 149922980 149923190 + 25.5 0.000 promoter-TSS (NM_001001788) promoter-TSS (NM_001001788) 36 NR_130110 353091 Hs.535023 NM_001001788 ENSG00000203722 RAET1G ULBP5 retinoic acid early transcript 1G protein-coding chr7-1043 chr7 101218576 101218786 + 25.5 0.000 intron (NM_006349, intron 1 of 4) L2c|LINE|L2 516 NM_006349 10467 Hs.211079 NM_006349 ENSG00000106400 ZNHIT1 CG1I|ZNFN4A1 zinc finger HIT-type containing 1 protein-coding chr17-698 chr17 4365337 4365547 + 25.5 0.000 intron (NM_003342, intron 1 of 5) CpG 1232 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr16-236 chr16 30698122 30698332 + 25.5 0.000 promoter-TSS (NM_006662) promoter-TSS (NM_006662) 244 NM_001256932 730183 Hs.535456 NM_001256932 ENSG00000261840 LOC730183 - uncharacterized LOC730183 protein-coding chr6-364 chr6 157833780 157833990 + 25.5 0.000 intron (NM_016224, intron 1 of 17) LTR45B|LTR|ERV1 10639 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr17-862 chr17 66467106 66467316 + 25.5 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -50357 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr9-342 chr9 134624981 134625191 + 25.5 0.000 Intergenic Intergenic -16719 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr2-836 chr2 177275170 177275380 + 25.5 0.000 Intergenic Intergenic -10144 NM_001313903 4780 Hs.744006 NM_006164 ENSG00000116044 NFE2L2 HEBP1|IMDDHH|NRF2 nuclear factor, erythroid 2 like 2 protein-coding chr5-400 chr5 134875364 134875574 + 25.5 0.000 intron (NM_024715, intron 1 of 4) MIRb|SINE|MIR 1699 NM_001350735 79770 Hs.741304 NM_024715 ENSG00000113621 TXNDC15 BUG|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding chr1-665 chr1 183932372 183932582 + 25.5 0.000 intron (NM_001303420, intron 11 of 11) intron (NM_001303420, intron 11 of 11) 105251 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr14-206 chr14 101073282 101073492 + 25.5 0.000 TTS (NR_047664) TTS (NR_047664) 3476 NR_047664 100507257 Hs.301755 NR_047664 ENSG00000223403 MEG9 LINC00584 maternally expressed 9 ncRNA chr19-1239 chr19 41367992 41368202 + 25.5 0.000 intron (NM_001098825, intron 1 of 3) LTR24|LTR|ERV1 -3948 NM_030578 80776 Hs.567596 NM_030578 ENSG00000123810 B9D2 ICIS-1|JBTS34|MKS10|MKSR-2|MKSR2 B9 domain containing 2 protein-coding chr11-674 chr11 73359334 73359544 + 25.5 0.000 intron (NM_014786, intron 9 of 20) intron (NM_014786, intron 9 of 20) -16960 NM_152222 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr12-283 chr12 57771982 57772192 + 25.5 0.000 promoter-TSS (NM_023033) promoter-TSS (NM_023033) 18 NM_023033 4234 Hs.42957 NM_005371 ENSG00000037897 METTL1 C12orf1|TRM8|TRMT8|YDL201w methyltransferase like 1 protein-coding chr5-226 chr5 172453028 172453238 + 25.5 0.000 intron (NM_001017995, intron 1 of 12) intron (NM_001017995, intron 1 of 12) 1390 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr14-303 chr14 21437268 21437478 + 25.5 0.000 promoter-TSS (NM_020920) promoter-TSS (NM_020920) -98 NM_020920 57680 Hs.530698 NM_020920 ENSG00000100888 CHD8 AUTS18|HELSNF1 chromodomain helicase DNA binding protein 8 protein-coding chr4-393 chr4 146175700 146175910 + 25.5 0.000 promoter-TSS (NM_007080) promoter-TSS (NM_007080) 87 NM_007080 11157 Hs.190520 NM_007080 ENSG00000164167 LSM6 YDR378C LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr10-294 chr10 69328013 69328223 + 25.5 0.000 intron (NM_001322367, intron 1 of 16) intron (NM_001322367, intron 1 of 16) 9271 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr2-922 chr2 235030786 235030996 + 25.5 0.000 intron (NM_001371306, intron 1 of 4) intron (NM_001371306, intron 1 of 4) 3156 NM_001371306 chr11-252 chr11 450152 450362 + 25.5 0.000 promoter-TSS (NM_001329544).2 promoter-TSS (NM_001329544).2 -22 NR_138046 81490 Hs.12851 NM_030783 ENSG00000174915 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding chr17-461 chr17 77444781 77444991 + 25.5 0.000 intron (NM_001293696, intron 1 of 9) L2|LINE|L2 -5863 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr22-314 chr22 24247526 24247736 + 25.5 0.000 Intergenic Intergenic -2489 NM_004121 2687 Hs.437156 NM_004121 ENSG00000099998 GGT5 GGL|GGT 5|GGT-REL|GGTLA1 gamma-glutamyltransferase 5 protein-coding chr4-579 chr4 17192574 17192784 + 25.5 0.000 Intergenic MER91C|DNA|hAT-Tip100 -6622 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr1-1604 chr1 78070783 78070993 + 25.5 0.000 intron (NM_017655, intron 1 of 5) intron (NM_017655, intron 1 of 5) 24922 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr11-706 chr11 80096781 80096991 + 25.5 0.000 Intergenic Intergenic -655856 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr5-262 chr5 67182474 67182684 + 25.5 0.000 3' UTR (NM_005582, exon 3 of 3) 3' UTR (NM_005582, exon 3 of 3) 14220 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr8-289 chr8 102536959 102537169 + 25.5 0.000 Intergenic Intergenic -14525 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr16-438 chr16 69530716 69530926 + 25.5 0.000 Intergenic Intergenic 35047 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr1-987 chr1 192952185 192952395 + 25.5 0.000 Intergenic MIR3|SINE|MIR -4033 NR_126003 102724954 Hs.243488 NR_126003 LINC01032 - long intergenic non-protein coding RNA 1032 ncRNA chr3-683 chr3 155426941 155427151 + 25.5 0.000 Intergenic MER61D|LTR|ERV1 -58757 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr7-820 chr7 30142752 30142962 + 25.5 0.000 intron (NM_152793, intron 1 of 2) L4_A_Mam|LINE|RTE-X 7871 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr6-398 chr6 127343439 127343649 + 25.5 0.000 promoter-TSS (NM_001105544) promoter-TSS (NM_001105544) 65 NM_001002030 55862 Hs.486410 NM_018479 ENSG00000093144 ECHDC1 HEL-S-76|MMCD|dJ351K20.2 ethylmalonyl-CoA decarboxylase 1 protein-coding chr3-362 chr3 194365266 194365476 + 25.3 0.000 intron (NM_001135057, intron 1 of 2) intron (NM_001135057, intron 1 of 2) 4372 NM_130830 131578 Hs.288467 NM_130830 ENSG00000172061 LRRC15 LIB leucine rich repeat containing 15 protein-coding chr11-297 chr11 95089676 95089886 + 25.3 0.000 promoter-TSS (NM_015036) promoter-TSS (NM_015036) -65 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding chr19-650 chr19 44915151 44915361 + 25.3 0.000 intron (NM_001321065, intron 2 of 3) intron (NM_001321065, intron 2 of 3) 648 NM_001645 341 Hs.110675 NM_001645 ENSG00000130208 APOC1 Apo-CI|ApoC-I|apo-CIB|apoC-IB apolipoprotein C1 protein-coding chr4-364 chr4 151484802 151485012 + 25.3 0.000 intron (NM_001109977, intron 3 of 13) intron (NM_001109977, intron 3 of 13) 75731 NM_001109977 729830 Hs.633810 NM_001109977 ENSG00000164142 FAM160A1 - family with sequence similarity 160 member A1 protein-coding chrX-76 chrX 38327335 38327545 + 25.3 0.000 promoter-TSS (NM_001367248) promoter-TSS (NM_001367248) 69 NR_159803 6103 Hs.61438 NM_000328 ENSG00000156313 RPGR COD1|CORDX1|CRD|PCDX|RP15|RP3|XLRP3|orf15 retinitis pigmentosa GTPase regulator protein-coding chr6-260 chr6 138988179 138988389 + 25.3 0.000 promoter-TSS (NM_001286611) promoter-TSS (NM_001286611) -23 NM_001286611 85021 Hs.334603 NM_031922 ENSG00000135597 REPS1 NBIA7|RALBP1 RALBP1 associated Eps domain containing 1 protein-coding chr6-1261 chr6 39772684 39772894 + 25.3 0.000 Intergenic Intergenic -19587 NM_001201427 23500 Hs.357128 NM_015345 ENSG00000146122 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding chr3-146 chr3 113515047 113515257 + 25.3 0.000 promoter-TSS (NM_144718) promoter-TSS (NM_144718) 4 NM_001331078 152185 Hs.477144 NM_144718 ENSG00000163611 SPICE1 CCDC52|SPICE spindle and centriole associated protein 1 protein-coding chr10-336 chr10 79381989 79382199 + 25.3 0.000 TTS (NM_153367) TTS (NM_153367) 34625 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr12-334 chr12 100267295 100267505 + 25.3 0.000 promoter-TSS (NR_135073) promoter-TSS (NR_135073) 16 NM_001330253 55681 Hs.506481 NM_017988 ENSG00000136021 SCYL2 CVAK104 SCY1 like pseudokinase 2 protein-coding chr9-361 chr9 127937648 127937858 + 25.3 0.000 intron (NM_003863, intron 1 of 3) CpG 731 NM_003863 8818 Hs.108973 NM_003863 ENSG00000136908 DPM2 CDG1U dolichyl-phosphate mannosyltransferase subunit 2, regulatory protein-coding chr9-344 chr9 137612271 137612481 + 25.3 0.000 intron (NM_001317968, intron 1 of 6) intron (NM_001317968, intron 1 of 6) 6153 NR_122036 85026 Hs.522520 NM_032937 ENSG00000203993 ARRDC1-AS1 C9orf37 ARRDC1 antisense RNA 1 ncRNA chr18-143 chr18 70337173 70337383 + 25.3 0.000 non-coding (NR_146458, exon 1 of 2) non-coding (NR_146458, exon 1 of 2) 902 NR_146458 102724895 NR_146458 LIVAR lnc18q22.2 liver cell viability associated lncRNA ncRNA chr9-654 chr9 114288212 114288422 + 25.3 0.000 intron (NM_032888, intron 41 of 60) intron (NM_032888, intron 41 of 60) -34706 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr15-140 chr15 66883644 66883854 + 25.3 0.000 Intergenic Intergenic 72766 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr20-326 chr20 33518024 33518234 + 25.3 0.000 intron (NM_001032999, intron 1 of 10) AluSc8|SINE|Alu 28033 NM_001032999 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr17-425 chr17 82716595 82716805 + 25.3 0.000 promoter-TSS (NR_136400) promoter-TSS (NR_136400) -6 NM_024619 79672 Hs.31431 NM_024619 ENSG00000141560 FN3KRP FN3KL fructosamine 3 kinase related protein protein-coding chr2-709 chr2 85912116 85912326 + 25.3 0.000 Intergenic Intergenic 22941 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr1-663 chr1 62230895 62231105 + 25.3 0.000 Intergenic Intergenic 36151 NM_019079 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr20-337 chr20 9978408 9978618 + 25.3 0.000 Intergenic Intergenic -7820 NR_109861 101929371 Hs.619265 NR_109861 PARAL1 - PPARG activating RBM14 associated lncRNA 1 ncRNA chr13-268 chr13 39365205 39365415 + 25.3 0.000 intron (NM_005780, intron 3 of 3) MamRTE1|LINE|RTE-BovB 237883 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr3-468 chr3 61956340 61956550 + 25.3 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 362502 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr13-186 chr13 29522220 29522430 + 25.3 0.000 exon (NM_003045, exon 8 of 13) exon (NM_003045, exon 8 of 13) -34575 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr7-386 chr7 151043512 151043722 + 25.3 0.000 intron (NM_001282292, intron 14 of 15) G-rich|Low_complexity|Low_complexity -4675 NM_020321 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chr5-531 chr5 54470770 54470980 + 25.3 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 15176 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr7-322 chr7 39566312 39566522 + 25.3 0.000 promoter-TSS (NM_020192) promoter-TSS (NM_020192) 13 NM_020192 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr1-602 chr1 155513513 155513723 + 25.3 0.000 intron (NM_018489, intron 2 of 27) intron (NM_018489, intron 2 of 27) -48424 NR_147964 645676 Hs.568693 NR_027023 ENSG00000235919 ASH1L-AS1 - ASH1L antisense RNA 1 ncRNA chrX-160 chrX 135520478 135520688 + 25.3 0.000 promoter-TSS (NR_147256) promoter-TSS (NR_147256) -77 NM_001351601 203522 Hs.496829 NM_182540 ENSG00000165359 INTS6L DDX26B integrator complex subunit 6 like protein-coding chr1-865 chr1 155962054 155962264 + 25.3 0.000 exon (NM_001162383, exon 10 of 22) exon (NM_001162383, exon 10 of 22) -10823 NR_106796 102465442 NR_106796 ENSG00000277817 MIR6738 hsa-mir-6738 microRNA 6738 ncRNA chr17-902 chr17 64707230 64707440 + 25.3 0.000 Intergenic Intergenic -45028 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr11-503 chr11 33700684 33700894 + 25.3 0.000 promoter-TSS (NM_001166692) promoter-TSS (NM_001166692) -49 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr16-359 chr16 85187094 85187304 + 25.3 0.000 Intergenic Intergenic -20597 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr20-585 chr20 12929191 12929401 + 25.3 0.000 intron (NR_109868, intron 4 of 11) MER90a|LTR|ERV1 7667 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr3-1228 chr3 110413824 110414034 + 25.3 0.000 Intergenic Intergenic 656030 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr3-640 chr3 124986281 124986491 + 25.3 0.000 intron (NM_020733, intron 14 of 16) intron (NM_020733, intron 14 of 16) -51635 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr2-1535 chr2 172710754 172710964 + 25.3 0.000 Intergenic Intergenic -24986 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr12-443 chr12 56488419 56488629 + 25.3 0.000 promoter-TSS (NM_001280798) promoter-TSS (NM_001280798) -110 NM_001280797 27165 Hs.212606 NM_013267 ENSG00000135423 GLS2 GA|GLS|LGA|hLGA glutaminase 2 protein-coding KV575244.1-1 KV575244.1 324157 324367 + 25.3 0.000 NA NA NA NA chr1-1912 chr1 215114316 215114526 + 25.3 0.000 intron (NM_001017424, intron 2 of 6) intron (NM_001017424, intron 2 of 6) 31684 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr16-972 chr16 59632362 59632572 + 25.3 0.000 Intergenic LTR25|LTR|ERV1 122724 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr11-831 chr11 68890839 68891049 + 25.3 0.000 TTS (NM_181514) TTS (NM_181514) 12888 NM_181514 219927 Hs.503047 NM_181512 ENSG00000197345 MRPL21 L21mt|MRP-L21 mitochondrial ribosomal protein L21 protein-coding chr7-338 chr7 149126135 149126345 + 25.3 0.000 promoter-TSS (NM_020781) promoter-TSS (NM_020781) 84 NM_001001661 155054 Hs.31743 NM_001001661 ENSG00000204947 ZNF425 - zinc finger protein 425 protein-coding chr19-517 chr19 12946189 12946399 + 25.3 0.000 intron (NM_001270363, intron 1 of 7) CpG 432 NM_005053 5886 Hs.643267 NM_005053 ENSG00000179262 RAD23A HHR23A|HR23A RAD23 homolog A, nucleotide excision repair protein protein-coding chr12-419 chr12 108802237 108802447 + 25.3 0.000 exon (NM_001161331, exon 10 of 13) exon (NM_001161331, exon 10 of 13) 25209 NM_001161331 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr9-651 chr9 95107166 95107376 + 25.3 0.000 intron (NM_001243743, intron 13 of 14) intron (NM_001243743, intron 13 of 14) -21177 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr9-547 chr9 3732590 3732800 + 25.3 0.000 Intergenic Intergenic 64609 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chr1-623 chr1 1551050 1551260 + 25.3 0.000 intron (NM_014188, intron 2 of 4) intron (NM_014188, intron 2 of 4) -10531 NM_001114748 339453 Hs.668654 NM_001114748 ENSG00000205090 TMEM240 C1orf70|SCA21 transmembrane protein 240 protein-coding chr17-246 chr17 1491245 1491455 + 25.3 0.000 intron (NM_001080779, intron 1 of 31) CpG 329 NM_033375 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr3-383 chr3 184320069 184320279 + 25.3 0.000 promoter-TSS (NM_004953) promoter-TSS (NM_004953) -89 NM_004953 1981 Hs.433750 NM_004953 ENSG00000114867 EIF4G1 EIF-4G1|EIF4F|EIF4G|EIF4GI|P220|PARK18 eukaryotic translation initiation factor 4 gamma 1 protein-coding chr13-101 chr13 31162128 31162338 + 25.3 0.000 promoter-TSS (NM_001349704) promoter-TSS (NM_001349704) 155 NM_001286505 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr13-137 chr13 42047784 42047994 + 25.3 0.000 promoter-TSS (NM_152910) promoter-TSS (NM_152910) -759 NM_152910 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr1-710 chr1 35047491 35047701 + 25.3 0.000 Intergenic Intergenic -12190 NM_001289088 79830 Hs.471243 NM_024772 ENSG00000197056 ZMYM1 MYM zinc finger MYM-type containing 1 protein-coding chr20-177 chr20 43457646 43457856 + 25.3 0.000 promoter-TSS (NR_034009) promoter-TSS (NR_034009) -145 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr13-272 chr13 48818516 48818726 + 25.3 0.000 Intergenic Intergenic -157291 NM_001079673 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr11-664 chr11 34266597 34266807 + 25.3 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 91308 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11-653 chr11 118619475 118619685 + 25.3 0.000 intron (NM_015157, intron 5 of 23) intron (NM_015157, intron 5 of 23) 11965 NM_001144758 23187 Hs.504062 NM_015157 ENSG00000019144 PHLDB1 LL5A pleckstrin homology like domain family B member 1 protein-coding chr12-424 chr12 6735731 6735941 + 25.3 0.000 Intergenic L1MD2|LINE|L1 11549 NM_001164093 50813 Hs.530823 NM_016319 ENSG00000111652 COPS7A CSN7|CSN7A|SGN7a COP9 signalosome subunit 7A protein-coding chr15-241 chr15 45631353 45631563 + 25.3 0.000 intron (NM_001271213, intron 1 of 10) intron (NM_001271213, intron 1 of 10) 310 NM_001271213 58472 Hs.511251 NM_021199 ENSG00000137767 SQOR CGI-44|PRO1975|SQR|SQRDL sulfide quinone oxidoreductase protein-coding chr1-1263 chr1 8598271 8598481 + 25.3 0.000 intron (NM_001042681, intron 4 of 22) intron (NM_001042681, intron 4 of 22) -103463 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr7-695 chr7 46786242 46786452 + 25.3 0.000 Intergenic Intergenic -89225 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr16-395 chr16 87127264 87127474 + 25.3 0.000 Intergenic Intergenic 69585 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chrX-209 chrX 49235442 49235652 + 25.3 0.000 promoter-TSS (NM_014008) promoter-TSS (NM_014008) 77 NM_014008 28952 Hs.26333 NM_014008 ENSG00000101997 CCDC22 CXorf37|JM1|RTSC2 coiled-coil domain containing 22 protein-coding chr6-246 chr6 157632912 157633122 + 25.3 0.000 intron (NM_024630, intron 5 of 8) intron (NM_024630, intron 5 of 8) 103885 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr2-412 chr2 135004296 135004506 + 25.3 0.000 intron (NM_001321177, intron 3 of 9) intron (NM_001321177, intron 3 of 9) 19248 NM_001321177 80122 Hs.659395 NM_025052 ENSG00000176601 MAP3K19 RCK|YSK4 mitogen-activated protein kinase kinase kinase 19 protein-coding chr2-271 chr2 218292352 218292562 + 25.3 0.000 promoter-TSS (NM_022152) promoter-TSS (NM_022152) 46 NM_022152 64114 Hs.591605 NM_022152 ENSG00000135926 TMBIM1 LFG3|MST100|MSTP100|PP1201|RECS1 transmembrane BAX inhibitor motif containing 1 protein-coding chr4-323 chr4 3286126 3286336 + 25.3 0.000 Intergenic Intergenic -27916 NM_198229 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr11-523 chr11 77346940 77347150 + 25.3 0.000 intron (NM_001128620, intron 9 of 15) intron (NM_001128620, intron 9 of 15) -45379 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr7-277 chr7 5823038 5823248 + 25.3 0.000 promoter-TSS (NR_023382) promoter-TSS (NR_023382) -17 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr20-160 chr20 17661071 17661281 + 25.3 0.000 intron (NM_004587, intron 1 of 24) intron (NM_004587, intron 1 of 24) 21066 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr19-429 chr19 17226276 17226486 + 25.3 0.000 intron (NM_024578, intron 1 of 5) CpG 155 NM_024578 79629 Hs.422676 NM_024578 ENSG00000099330 OCEL1 FWP009|S863-9 occludin/ELL domain containing 1 protein-coding chr2-1031 chr2 32864884 32865094 + 25.3 0.000 intron (NR_027098, intron 2 of 5) intron (NR_027098, intron 2 of 5) 39556 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr3-684 chr3 8776535 8776745 + 25.3 0.000 Intergenic Intergenic -7026 NM_001354653 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr20-249 chr20 17611419 17611629 + 25.2 0.000 Intergenic Intergenic 41449 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chrX-47 chrX 104166286 104166496 + 25.2 0.000 promoter-TSS (NM_207318) promoter-TSS (NM_207318) -62 NM_207318 139231 Hs.496535 NM_207318 ENSG00000123575 FAM199X CXorf39 family with sequence similarity 199, X-linked protein-coding chr19-526 chr19 48795399 48795609 + 25.2 0.000 intron (NM_001164773, intron 8 of 8) intron (NM_001164773, intron 8 of 8) 15525 NM_001164773 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr20-371 chr20 56689428 56689638 + 25.2 0.000 Intergenic Intergenic 60227 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr11-713 chr11 10490673 10490883 + 25.2 0.000 intron (NM_001025389, intron 6 of 14) intron (NM_001025389, intron 6 of 14) 17548 NR_039705 100616263 NR_039705 ENSG00000283813 MIR4485 mir-4485 microRNA 4485 ncRNA chr1-1845 chr1 19450962 19451172 + 25.2 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 33228 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr14-378 chr14 96122159 96122369 + 25.2 0.000 Intergenic MER44B|DNA|TcMar-Tigger -82534 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr1-757 chr1 39204698 39204908 + 25.2 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 120636 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr12-596 chr12 106994877 106995087 + 25.2 0.000 intron (NM_004075, intron 10 of 12) intron (NM_004075, intron 10 of 12) -7816 NM_025198 80298 Hs.5009 NM_025198 ENSG00000120832 MTERF2 MTERFD3|mTERFL mitochondrial transcription termination factor 2 protein-coding chr4-465 chr4 4555916 4556126 + 25.2 0.000 intron (NR_037888, intron 2 of 5) intron (NR_037888, intron 2 of 5) -13678 NM_001346282 53407 Hs.584913 NM_016930 ENSG00000168818 STX18 Ufe1 syntaxin 18 protein-coding chr5-768 chr5 36657738 36657948 + 25.2 0.000 intron (NM_004172, intron 3 of 9) L3|LINE|CR1 51237 NM_001166695 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chrX-66 chrX 51893431 51893641 + 25.2 0.000 promoter-TSS (NM_001005333) promoter-TSS (NM_001005333) -87 NM_001005333 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr19-453 chr19 56538482 56538692 + 25.2 0.000 promoter-TSS (NM_020828) promoter-TSS (NM_020828) -361 NM_001308440 140612 Hs.14794 NM_020828 ENSG00000196867 ZFP28 mkr5 ZFP28 zinc finger protein protein-coding chr12-514 chr12 118135900 118136110 + 25.2 0.000 promoter-TSS (NM_002567) promoter-TSS (NM_002567) -119 NM_002567 5037 Hs.433863 NM_002567 ENSG00000089220 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|HEL-S-96|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding chr10-229 chr10 41875335 41875545 + 25.2 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 492605 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr5-295 chr5 7926435 7926645 + 25.2 0.000 Intergenic Intergenic 57392 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr5-415 chr5 140711225 140711435 + 25.2 0.000 promoter-TSS (NR_026703) promoter-TSS (NR_026703) 54 NR_026703 56664 NR_026703 ENSG00000199990 VTRNA1-1 HVG1|VAULTRC1|VR1|hvg-1|vRNA vault RNA 1-1 ncRNA chr10-605 chr10 69696027 69696237 + 25.2 0.000 Intergenic MER119|DNA|hAT-Charlie 65885 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr22-308 chr22 42937558 42937768 + 25.2 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 9378 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr19-689 chr19 11355202 11355412 + 25.2 0.000 promoter-TSS (NM_022737) promoter-TSS (NM_022737) -125 NM_001170635 64748 Hs.6846 NM_022737 ENSG00000105520 PLPPR2 LPPR2|PRG4 phospholipid phosphatase related 2 protein-coding chr9-315 chr9 19230531 19230741 + 25.2 0.000 promoter-TSS (NM_017925) promoter-TSS (NM_017925) -57 NM_001330640 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr10-366 chr10 80155436 80155646 + 25.2 0.000 3' UTR (NM_001278407, exon 17 of 17) 3' UTR (NM_001278407, exon 17 of 17) 22811 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr17-304 chr17 47831536 47831746 + 25.2 0.000 promoter-TSS (NM_148887) promoter-TSS (NM_148887) -29 NM_033413 90506 Hs.130767 NM_033413 ENSG00000141294 LRRC46 - leucine rich repeat containing 46 protein-coding chr13-216 chr13 77980665 77980875 + 25.2 0.000 non-coding (NR_108076, exon 3 of 3) non-coding (NR_108076, exon 3 of 3) -5243 NM_000115 1910 Hs.82002 NM_000115 ENSG00000136160 EDNRB ABCDS|ET-B|ET-BR|ETB|ETB1|ETBR|ETRB|HSCR|HSCR2|WS4A endothelin receptor type B protein-coding chr19-712 chr19 13056062 13056272 + 25.2 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 31388 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr8-261 chr8 110894492 110894702 + 25.2 0.000 Intergenic LTR18B|LTR|ERVL 132836 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chrX-120 chrX 101799492 101799702 + 25.2 0.000 Intergenic Intergenic 57980 NR_159736 55998 Hs.307077 NM_032946 ENSG00000126952 NXF5 - nuclear RNA export factor 5 protein-coding chr10-653 chr10 93468692 93468902 + 25.2 0.000 intron (NM_013451, intron 1 of 53) intron (NM_013451, intron 1 of 53) 13537 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr19-601 chr19 9324273 9324483 + 25.2 0.000 promoter-TSS (NM_001202425) promoter-TSS (NM_001202425) 152 NM_001202412 84527 Hs.172979 NM_032497 ENSG00000188321 ZNF559 NBLA00121 zinc finger protein 559 protein-coding chr11-1046 chr11 10308584 10308794 + 25.2 0.000 intron (NR_103765, intron 1 of 3) intron (NR_103765, intron 1 of 3) 376 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA chr17-583 chr17 42112244 42112454 + 25.2 0.000 TTS (NM_021078) TTS (NM_021078) 365 NM_024119 79132 Hs.55918 NM_024119 ENSG00000108771 DHX58 D11LGP2|D11lgp2e|LGP2|RLR-3 DExH-box helicase 58 protein-coding chr2-410 chr2 120566575 120566785 + 25.2 0.000 Intergenic Intergenic -100331 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr17-457 chr17 47189529 47189739 + 25.2 0.000 promoter-TSS (NM_001353051) promoter-TSS (NM_001353051) -339 NM_001353050 996 Hs.463295 NM_001256 ENSG00000004897 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding chr20-231 chr20 38257763 38257973 + 25.2 0.000 intron (NM_001029864, intron 1 of 13) MER113|DNA|hAT-Charlie -2307 NR_104170 149684 Hs.628250 NR_104170 ENSG00000285347 LOC149684 - uncharacterized LOC149684 ncRNA chr4-557 chr4 74473258 74473468 + 25.2 0.000 Intergenic Intergenic 28227 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr20-354 chr20 48929002 48929212 + 25.2 0.000 intron (NM_006420, intron 1 of 38) intron (NM_006420, intron 1 of 38) 7396 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr3-492 chr3 194554508 194554718 + 25.2 0.000 Intergenic Intergenic -29655 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr2-520 chr2 171021595 171021805 + 25.2 0.000 intron (NM_001136555, intron 10 of 18) intron (NM_001136555, intron 10 of 18) 45273 NM_001136555 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr11-197 chr11 65181298 65181508 + 25.2 0.000 promoter-TSS (NM_005186) promoter-TSS (NM_005186) 30 NM_001198868 823 Hs.502842 NM_005186 ENSG00000014216 CAPN1 CANP|CANP1|CANPL1|SPG76|muCANP|muCL calpain 1 protein-coding chr1-1230 chr1 46203631 46203841 + 25.2 0.000 intron (NM_001013615, intron 1 of 1) intron (NM_001013615, intron 1 of 1) 402 NM_001013615 541468 Hs.568642 NM_001013615 ENSG00000171357 LURAP1 C1orf190|LRAP35a|LRP35A leucine rich adaptor protein 1 protein-coding chr11-1161 chr11 27464223 27464433 + 25.2 0.000 intron (NM_018490, intron 1 of 17) intron (NM_018490, intron 1 of 17) -7403 NR_131169 105376671 Hs.568999 NR_131169 ENSG00000254862 LOC105376671 lnc-BBOX1-1 uncharacterized LOC105376671 ncRNA chr9-588 chr9 26947191 26947401 + 25.2 0.000 promoter-TSS (NM_001099222) promoter-TSS (NM_001099222) -4 NM_001099222 80173 Hs.145402 NM_025103 ENSG00000096872 IFT74 BBS20|CCDC2|CMG-1|CMG1 intraflagellar transport 74 protein-coding chr10-303 chr10 7797568 7797778 + 25.2 0.000 intron (NM_001001973, intron 3 of 9) intron (NM_001001973, intron 3 of 9) 9496 NM_001001973 509 Hs.271135 NM_005174 ENSG00000165629 ATP5F1C ATP5C|ATP5C1|ATP5CL1 ATP synthase F1 subunit gamma protein-coding chr15-316 chr15 63072779 63072989 + 25.2 0.000 TTS (NM_001018007) TTS (NM_001018007) -23497 NR_147233 111064646 Hs.602995 NR_147233 TPM1-AS TPM1-AS1 TPM1 antisense RNA ncRNA chr2-324 chr2 158968426 158968636 + 25.2 0.000 promoter-TSS (NR_146421) promoter-TSS (NR_146421) -103 NM_001350064 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr2-624 chr2 99181137 99181347 + 25.2 0.000 promoter-TSS (NM_138798) promoter-TSS (NM_138798) 58 NR_028356 51263 Hs.346736 NM_016503 ENSG00000185414 MRPL30 L28MT|L30MT|MRP-L28|MRP-L30|MRPL28|MRPL28M|RPML28 mitochondrial ribosomal protein L30 protein-coding chr2-275 chr2 11155094 11155304 + 25.2 0.000 promoter-TSS (NM_001282711) promoter-TSS (NM_001282711) -173 NM_001282710 130814 Hs.274415 NM_152391 ENSG00000162976 SLC66A3 C2orf22|PQLC3 solute carrier family 66 member 3 protein-coding chr16-374 chr16 30948287 30948497 + 25.2 0.000 promoter-TSS (NM_152288) promoter-TSS (NM_152288) -676 NM_152288 93129 Hs.745104 NM_152288 ENSG00000175938 ORAI3 TMEM142C ORAI calcium release-activated calcium modulator 3 protein-coding chr3-520 chr3 67647526 67647736 + 25.2 0.000 intron (NM_001177599, intron 1 of 10) intron (NM_001177599, intron 1 of 10) 6983 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr2-1052 chr2 159031003 159031213 + 25.2 0.000 intron (NM_001350063, intron 2 of 24) intron (NM_001350063, intron 2 of 24) 62468 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr1-1279 chr1 109197283 109197493 + 25.2 0.000 intron (NM_001284352, intron 14 of 20) intron (NM_001284352, intron 14 of 20) 10839 NM_001284353 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding chr10-754 chr10 70656698 70656908 + 25.2 0.000 Intergenic MIR3|SINE|MIR -15703 NM_139155 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr11-528 chr11 13216228 13216438 + 25.2 0.000 Intergenic Intergenic -60319 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr5-364 chr5 138609592 138609802 + 25.2 0.000 Intergenic Intergenic -34296 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr20-434 chr20 49028800 49029010 + 25.2 0.000 intron (NM_006420, intron 37 of 38) intron (NM_006420, intron 37 of 38) 17151 NR_110625 102723483 Hs.209000 NR_110624 ENSG00000227431 CSE1L-AS1 - CSE1L antisense RNA 1 ncRNA chr18-175 chr18 9148039 9148249 + 25.2 0.000 intron (NM_001204056, intron 1 of 11) intron (NM_001204056, intron 1 of 11) 10581 NM_001204056 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding chr4-168 chr4 159103113 159103323 + 25.2 0.000 promoter-TSS (NM_001351724) promoter-TSS (NM_001351724) -833 NM_001351724 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr9-569 chr9 20558765 20558975 + 25.2 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) -56528 NR_039685 100616441 NR_039685 ENSG00000264941 MIR4474 - microRNA 4474 ncRNA chrX-48 chrX 130268560 130268770 + 25.2 0.000 intron (NM_017666, intron 1 of 18) CpG 234 NM_017666 55609 Hs.308418 NM_017666 ENSG00000056277 ZNF280C SUHW3|ZNF633|ZPET zinc finger protein 280C protein-coding chrX-87 chrX 47145064 47145274 + 25.2 0.000 promoter-TSS (NM_019056) promoter-TSS (NM_019056) 41 NM_019056 54539 Hs.521969 NM_019056 ENSG00000147123 NDUFB11 CI-ESSS|ESSS|MC1DN30|NP17.3|Np15|P17.3 NADH:ubiquinone oxidoreductase subunit B11 protein-coding chr12-448 chr12 116426456 116426666 + 25.2 0.000 Intergenic Intergenic 1757 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr9-327 chr9 137619519 137619729 + 25.2 0.000 promoter-TSS (NR_122035) promoter-TSS (NR_122035) 619 NM_001354611 79813 Hs.495511 NM_024757 ENSG00000181090 EHMT1 EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D euchromatic histone lysine methyltransferase 1 protein-coding chr3-1092 chr3 4721538 4721748 + 25.2 0.000 intron (NM_001168272, intron 39 of 60) intron (NM_001168272, intron 39 of 60) 29947 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr10-580 chr10 35218456 35218666 + 25.2 0.000 Intergenic Intergenic 22659 NM_182723 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr1-1207 chr1 182962619 182962829 + 25.2 0.000 Intergenic Intergenic -9558 NM_030933 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr15-124 chr15 74906598 74906808 + 25.2 0.000 exon (NM_001321922, exon 1 of 5) exon (NM_001321922, exon 1 of 5) 148 NM_020447 57184 Hs.367690 NM_020447 ENSG00000178761 FAM219B C15orf17 family with sequence similarity 219 member B protein-coding chr2-983 chr2 100742400 100742610 + 25.2 0.000 Intergenic Intergenic -77634 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr1-1202 chr1 148402435 148402645 + 25.2 0.000 promoter-TSS (NR_111930) promoter-TSS (NR_111930) 57 NR_111930 100132057 Hs.585189 NR_033189 LOC100132057 - phosphodiesterase 4D interacting protein pseudogene pseudo chr13-481 chr13 74661840 74662050 + 25.2 0.000 Intergenic Intergenic 109102 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr11-654 chr11 132402286 132402496 + 25.2 0.000 Intergenic Intergenic 118089 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr11-295 chr11 75583807 75584017 + 25.2 0.000 intron (NR_145823, intron 1 of 1) intron (NR_145823, intron 1 of 1) 716 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr13-263 chr13 113187342 113187552 + 25.2 0.000 5' UTR (NM_001353095, exon 8 of 15) 5' UTR (NM_001353095, exon 8 of 15) -20746 NM_001278513 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr14-363 chr14 20989733 20989943 + 25.2 0.000 promoter-TSS (NM_001029991) promoter-TSS (NM_001029991) -142 NM_001029991 64745 Hs.512693 NM_022734 ENSG00000165792 METTL17 METT11D1 methyltransferase like 17 protein-coding chr9-583 chr9 134683491 134683701 + 25.2 0.000 intron (NM_001278074, intron 1 of 65) intron (NM_001278074, intron 1 of 65) -30753 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr10-566 chr10 67849358 67849568 + 25.2 0.000 Intergenic Intergenic -11275 NM_021800 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr16-397 chr16 88570006 88570216 + 25.1 0.000 promoter-TSS (NM_144604) promoter-TSS (NM_144604) -292 NM_144604 124245 Hs.93670 NM_144604 ENSG00000158545 ZC3H18 NHN1 zinc finger CCCH-type containing 18 protein-coding chr12-395 chr12 121748955 121749165 + 25.1 0.000 intron (NM_001080825, intron 3 of 11) intron (NM_001080825, intron 3 of 11) 36308 NM_001080825 144404 Hs.644504 NM_001080825 ENSG00000188735 TMEM120B - transmembrane protein 120B protein-coding chr14-320 chr14 75011669 75011879 + 25.1 0.000 3' UTR (NM_014239, exon 8 of 8) 3' UTR (NM_014239, exon 8 of 8) 8853 NM_014239 8892 Hs.409137 NM_014239 ENSG00000119718 EIF2B2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B subunit beta protein-coding chr19-512 chr19 52786726 52786936 + 25.1 0.000 promoter-TSS (NM_198457) promoter-TSS (NM_198457) -40 NM_198457 162966 Hs.696848 NM_198457 ENSG00000189190 ZNF600 KR-ZNF1 zinc finger protein 600 protein-coding chr7-555 chr7 23246710 23246920 + 25.1 0.000 promoter-TSS (NM_002510) promoter-TSS (NM_002510) 40 NM_001005340 10457 Hs.190495 NM_002510 ENSG00000136235 GPNMB HGFIN|NMB|PLCA3 glycoprotein nmb protein-coding chr11-1222 chr11 47572025 47572235 + 25.1 0.000 TTS (NM_001318716) TTS (NM_001318716) 6531 NM_175732 114971 Hs.656205 NM_175732 ENSG00000110536 PTPMT1 DUSP23|MOSP|PLIP|PNAS-129 protein tyrosine phosphatase mitochondrial 1 protein-coding chr10-890 chr10 100373936 100374146 + 25.1 0.000 intron (NR_026762, intron 1 of 2) intron (NR_026762, intron 1 of 2) 465 NR_026762 90271 Hs.628088 NR_026762 ENSG00000235823 OLMALINC C10orf75|HI-LNC80|LINC00263|NCRNA00263|OLMALINCAS oligodendrocyte maturation-associated long intergenic non-coding RNA ncRNA chr12-335 chr12 104604099 104604309 + 25.1 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 12571 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr15-479 chr15 98178043 98178253 + 25.1 0.000 Intergenic Intergenic -89395 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chrX-104 chrX 154040385 154040595 + 25.1 0.000 intron (NM_001369393, intron 1 of 3) L1MC4|LINE|L1 -20501 NR_031757 100313781 NR_031757 ENSG00000284286 MIR718 hsa-mir-718 microRNA 718 ncRNA chr20-519 chr20 19775805 19776015 + 25.1 0.000 Intergenic Intergenic -110611 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr10-171 chr10 133308651 133308861 + 25.1 0.000 promoter-TSS (NM_145806) promoter-TSS (NM_145806) -158 NM_145806 118472 Hs.422113 NM_145806 ENSG00000198546 ZNF511 - zinc finger protein 511 protein-coding chr2-758 chr2 202237715 202237925 + 25.1 0.000 intron (NR_163943, intron 1 of 5) intron (NR_163943, intron 1 of 5) 777 NM_001371394 chr8-82 chr8 21919461 21919671 + 25.1 0.000 promoter-TSS (NR_156173) promoter-TSS (NR_156173) -96 NM_001362802 23039 Hs.172685 NM_015024 ENSG00000130227 XPO7 EXP7|RANBP16 exportin 7 protein-coding chr2-883 chr2 38462442 38462652 + 25.1 0.000 intron (NR_110259, intron 4 of 4) intron (NR_110259, intron 4 of 4) 31253 NR_146454 100996902 Hs.128280 NR_146454 ENSG00000235009 LINC01883 - long intergenic non-protein coding RNA 1883 ncRNA chr13-245 chr13 99124972 99125182 + 25.1 0.000 Intergenic Intergenic 38354 NR_047482 100861541 Hs.344872 NR_047482 DOCK9-DT DOCK9-AS2 DOCK9 divergent transcript ncRNA chr4-661 chr4 5758811 5759021 + 25.1 0.000 TTS (NM_001306092) TTS (NM_001306092) 47715 NM_153717 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr12-685 chr12 87140318 87140528 + 25.1 0.000 Intergenic Intergenic -190316 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr18-119 chr18 73614908 73615118 + 25.1 0.000 Intergenic Intergenic 290072 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr7-796 chr7 66283629 66283839 + 25.1 0.000 intron (NM_003596, intron 2 of 5) intron (NM_003596, intron 2 of 5) 78400 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr6-431 chr6 84764490 84764700 + 25.1 0.000 promoter-TSS (NM_001080508) promoter-TSS (NM_001080508) 3 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box transcription factor 18 protein-coding chr21-226 chr21 34367394 34367604 + 25.1 0.000 intron (NM_172201, intron 1 of 1) intron (NM_172201, intron 1 of 1) 3475 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr2-802 chr2 32627965 32628175 + 25.1 0.000 promoter-TSS (NM_001193509) promoter-TSS (NM_001193509) 20 NM_001193509 55622 Hs.468125 NM_017735 ENSG00000018699 TTC27 - tetratricopeptide repeat domain 27 protein-coding chr9-602 chr9 124658296 124658506 + 25.1 0.000 promoter-TSS (NR_038975) promoter-TSS (NR_038975) -35 NR_038975 100379345 Hs.660412 NR_038975 ENSG00000224020 MIR181A2HG - MIR181A2 host gene ncRNA chr16-300 chr16 1745535 1745745 + 25.1 0.000 intron (NM_001040439, intron 5 of 30) MER20|DNA|hAT-Charlie 10655 NR_036138 100423012 NR_036138 ENSG00000265820 MIR3177 mir-3177 microRNA 3177 ncRNA chr18-80 chr18 50266378 50266588 + 25.1 0.000 promoter-TSS (NM_145020) promoter-TSS (NM_145020) 12 NM_145020 220136 Hs.658630 NM_145020 ENSG00000172361 CFAP53 CCDC11|HTX6 cilia and flagella associated protein 53 protein-coding chr19-582 chr19 23274100 23274310 + 25.1 0.000 promoter-TSS (NR_103741) promoter-TSS (NR_103741) 46 NR_103741 100132815 Hs.629249 NR_103741 IPO5P1 - importin 5 pseudogene 1 pseudo chr4-613 chr4 56387177 56387387 + 25.1 0.000 intron (NM_001286672, intron 1 of 10) intron (NM_001286672, intron 1 of 10) 209 NM_001286668 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr1-1439 chr1 155934348 155934558 + 25.1 0.000 promoter-TSS (NM_014949) promoter-TSS (NM_014949) -40 NM_014949 22889 Hs.24656 NM_014949 ENSG00000132680 KHDC4 BLOM7|KIAA0907|SNORA80EHG KH domain containing 4, pre-mRNA splicing factor protein-coding chr2-347 chr2 128301516 128301726 + 25.1 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 17247 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr15-155 chr15 59594522 59594732 + 25.1 0.000 Intergenic Intergenic -17156 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr16-807 chr16 30998276 30998486 + 25.1 0.000 intron (NM_052874, intron 4 of 9) intron (NM_052874, intron 4 of 9) 12257 NM_052874 112755 Hs.542230 NM_052874 ENSG00000099365 STX1B GEFSP9|STX1B1|STX1B2 syntaxin 1B protein-coding chr6-468 chr6 166033001 166033211 + 25.1 0.000 Intergenic L1M4a2|LINE|L1 -45067 NR_026861 90632 Hs.31917 NR_026860 ENSG00000112541 LINC00473 C6orf176|LNC473|bA142J11.1 long intergenic non-protein coding RNA 473 ncRNA chr22-448 chr22 45731520 45731730 + 25.1 0.000 intron (NM_013236, intron 7 of 11) intron (NM_013236, intron 7 of 11) -28899 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr5-621 chr5 116032231 116032441 + 25.1 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -19130 NM_001195581 644100 Hs.98288 NM_001195581 ENSG00000268223 ARL14EPL - ADP ribosylation factor like GTPase 14 effector protein like protein-coding chr1-1822 chr1 226677149 226677359 + 25.1 0.000 intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) -2186 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr13-88 chr13 41961044 41961254 + 25.1 0.000 promoter-TSS (NR_039974) promoter-TSS (NR_039974) -20 NR_039974 100507240 Hs.147766 NR_039974 ENSG00000278338 VWA8-AS1 - VWA8 antisense RNA 1 (head to head) ncRNA chr2-782 chr2 107072252 107072462 + 25.1 0.000 Intergenic Intergenic -185248 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr18-121 chr18 5546761 5546971 + 25.1 0.000 intron (NM_001281535, intron 3 of 21) L2c|LINE|L2 -2527 NM_001330557 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr1-1309 chr1 77322079 77322289 + 25.1 0.000 intron (NM_012093, intron 5 of 13) intron (NM_012093, intron 5 of 13) 39097 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr2-362 chr2 95526561 95526771 + 25.1 0.000 Intergenic CpG -41935 NM_001164464 653192 Hs.723811 NM_001164464 ENSG00000144010 TRIM43B - tripartite motif containing 43B protein-coding chr17-842 chr17 880779 880989 + 25.1 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -16773 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr6-371 chr6 52595330 52595540 + 25.1 0.000 Intergenic Intergenic 18137 NR_103447 401264 Hs.544586 NR_103446 ENSG00000225791 TRAM2-AS1 - TRAM2 antisense RNA 1 (head to head) ncRNA chr20-147 chr20 34525969 34526179 + 25.1 0.000 intron (NM_001281728, intron 2 of 4) intron (NM_001281728, intron 2 of 4) 9690 NM_014183 83658 Hs.593920 NM_014183 ENSG00000125971 DYNLRB1 BITH|BLP|DNCL2A|DNLC2A|ROBLD1 dynein light chain roadblock-type 1 protein-coding chr13-434 chr13 75770557 75770767 + 25.1 0.000 intron (NM_005358, intron 5 of 29) intron (NM_005358, intron 5 of 29) 10001 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr2-813 chr2 229154462 229154672 + 25.1 0.000 intron (NM_001330157, intron 1 of 1) L2a|LINE|L2 77525 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr17-533 chr17 49788422 49788632 + 25.1 0.000 promoter-TSS (NM_001199158) promoter-TSS (NM_001199158) -154 NM_001346706 11143 Hs.21907 NM_007067 ENSG00000136504 KAT7 HBO1|HBOA|MYST2|ZC2HC7 lysine acetyltransferase 7 protein-coding chr15-220 chr15 82750367 82750577 + 25.1 0.000 promoter-TSS (NR_110099) promoter-TSS (NR_110099) -92 NR_110099 100505616 Hs.513091 NR_110096 ENSG00000250988 SNHG21 FSD2-AS1|SCARNA15HG small nucleolar RNA host gene 21 ncRNA chr1-1021 chr1 207890352 207890562 + 25.1 0.000 intron (NM_001025109, intron 4 of 7) intron (NM_001025109, intron 4 of 7) 20668 NM_001773 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr11-1251 chr11 99065243 99065453 + 25.1 0.000 intron (NM_001243270, intron 1 of 23) intron (NM_001243270, intron 1 of 23) 44399 NM_001243270 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr19-673 chr19 4744909 4745119 + 25.1 0.000 Intergenic Intergenic -21172 NR_158699 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr10-323 chr10 125155129 125155339 + 25.1 0.000 intron (NM_001290214, intron 1 of 10) intron (NM_001290214, intron 1 of 10) 3543 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr6-437 chr6 151044904 151045114 + 25.1 0.000 intron (NM_001350486, intron 26 of 27) intron (NM_001350486, intron 26 of 27) 38001 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr12-421 chr12 127655748 127655958 + 25.1 0.000 promoter-TSS (NR_134995) promoter-TSS (NR_134995) -265 NR_134995 105370068 Hs.524845 NR_134995 LOC105370068 - uncharacterized LOC105370068 ncRNA chr5-190 chr5 139198265 139198475 + 25.1 0.000 promoter-TSS (NM_001037633) promoter-TSS (NM_001037633) -2 NM_001037633 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr2-501 chr2 127576437 127576647 + 25.1 0.000 intron (NM_001080527, intron 7 of 46) intron (NM_001080527, intron 7 of 46) -5580 NR_132317 105373609 Hs.677195 NR_132317 LOC105373609 - uncharacterized LOC105373609 ncRNA chr16-441 chr16 87588856 87589066 + 25.1 0.000 Intergenic Intergenic -12874 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr10-617 chr10 114306575 114306785 + 25.1 0.000 intron (NM_001001936, intron 10 of 18) intron (NM_001001936, intron 10 of 18) 67066 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr12-339 chr12 132610455 132610665 + 25.1 0.000 promoter-TSS (NM_001195520) promoter-TSS (NM_001195520) 22 NM_001195520 100507055 Hs.282811 NM_001195520 ENSG00000204583 LRCOL1 - leucine rich colipase like 1 protein-coding chr17-1189 chr17 64959741 64959951 + 25.1 0.000 Intergenic Intergenic 15739 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo chr20-206 chr20 24337173 24337383 + 25.1 0.000 Intergenic Intergenic -131921 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr3-239 chr3 179347478 179347688 + 25.1 0.000 promoter-TSS (NM_033540) promoter-TSS (NM_033540) -126 NM_033540 55669 Hs.478383 NM_017927 ENSG00000171109 MFN1 hfzo1|hfzo2 mitofusin 1 protein-coding chr11-746 chr11 73429367 73429577 + 25.1 0.000 intron (NM_001286050, intron 3 of 8) intron (NM_001286050, intron 3 of 8) 52804 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr2-1017 chr2 7845439 7845649 + 25.1 0.000 Intergenic Intergenic 54111 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr1-492 chr1 27365720 27365930 + 25.1 0.000 intron (NM_001297609, intron 1 of 27) intron (NM_001297609, intron 1 of 27) 1136 NM_001297609 9064 Hs.194694 NM_004672 ENSG00000142733 MAP3K6 ASK2|MAPKKK6|MEKK6 mitogen-activated protein kinase kinase kinase 6 protein-coding chr16-970 chr16 28604126 28604336 + 25.1 0.000 Intergenic Intergenic 5097 NM_177534 6817 Hs.567342 NM_001055 ENSG00000196502 SULT1A1 HAST1/HAST2|P-PST|PST|ST1A1|ST1A3|STP|STP1|TSPST1 sulfotransferase family 1A member 1 protein-coding chr7-457 chr7 6159465 6159675 + 25.1 0.000 intron (NM_032172, intron 17 of 17) intron (NM_032172, intron 17 of 17) 12567 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr12-825 chr12 46664975 46665185 + 25.1 0.000 Intergenic Intergenic 160917 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr5-463 chr5 34189830 34190040 + 25.1 0.000 non-coding (NR_157803, exon 1 of 1) non-coding (NR_157803, exon 1 of 1) 354 NR_157803 646652 Hs.546584 NR_157803 LOC646652 - integral membrane glycoprotein-like pseudogene pseudo chr2-1122 chr2 237858439 237858649 + 25.1 0.000 Intergenic Intergenic -1079 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr4-236 chr4 1010493 1010703 + 25.1 0.000 Intergenic CpG -1028 NM_001004356 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr2-1059 chr2 207558044 207558254 + 25.1 0.000 promoter-TSS (NM_001371428) promoter-TSS (NM_001371428) -973 NM_001371428 chr15-309 chr15 75368405 75368615 + 25.1 0.000 promoter-TSS (NM_006715) promoter-TSS (NM_006715) 97 NM_006715 4123 Hs.26232 NM_006715 ENSG00000140400 MAN2C1 MAN6A8|MANA|MANA1 mannosidase alpha class 2C member 1 protein-coding chr4-562 chr4 101977115 101977325 + 25.1 0.000 intron (NM_017935, intron 7 of 16) MLT1I|LTR|ERVL-MaLR 163378 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr19-617 chr19 47157710 47157920 + 25.1 0.000 intron (NM_005500, intron 5 of 8) intron (NM_005500, intron 5 of 8) 26980 NM_005500 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr14-240 chr14 102893534 102893744 + 25.1 0.000 intron (NM_145725, intron 9 of 11) intron (NM_145725, intron 9 of 11) -29017 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr10-395 chr10 72354726 72354936 + 25.1 0.000 promoter-TSS (NM_017626) promoter-TSS (NM_017626) 88 NM_001365081 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr1-1206 chr1 168301764 168301974 + 25.1 0.000 intron (NM_005149, intron 5 of 7) LTR23|LTR|ERV1 20992 NM_005149 9095 Hs.716656 NM_005149 ENSG00000143178 TBX19 TBS19|TPIT|dJ747L4.1 T-box transcription factor 19 protein-coding chr17-241 chr17 47941544 47941754 + 25.1 0.000 promoter-TSS (NM_018129) promoter-TSS (NM_018129) 78 NM_018129 55163 Hs.631742 NM_018129 ENSG00000108439 PNPO HEL-S-302|PDXPO pyridoxamine 5'-phosphate oxidase protein-coding chr1-684 chr1 208159983 208160193 + 25.1 0.000 intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 84296 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr9-433 chr9 113594022 113594232 + 25.1 0.000 promoter-TSS (NM_001276262) promoter-TSS (NM_001276262) -2 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr4-324 chr4 15303213 15303423 + 25.1 0.000 intron (NR_125911, intron 1 of 5) L2c|LINE|L2 -36670 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr17-686 chr17 57482054 57482264 + 25.1 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) 41438 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr19-628 chr19 47428264 47428474 + 25.0 0.000 3' UTR (NM_015063, exon 10 of 10) 3' UTR (NM_015063, exon 10 of 10) -6136 NM_001346148 56917 Hs.380923 NM_020160 ENSG00000105419 MEIS3 MRG2 Meis homeobox 3 protein-coding chr18-155 chr18 70154738 70154948 + 25.0 0.000 intron (NM_001318520, intron 14 of 47) intron (NM_001318520, intron 14 of 47) 50844 NM_173630 25914 Hs.654809 NM_173630 ENSG00000176225 RTTN MSSP rotatin protein-coding chr20-365 chr20 33531468 33531678 + 25.0 0.000 intron (NM_001032999, intron 1 of 10) intron (NM_001032999, intron 1 of 10) -30792 NM_001039709 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr1-1233 chr1 58618443 58618653 + 25.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -41296 NM_002353 4070 Hs.23582 NM_002353 ENSG00000184292 TACSTD2 EGP-1|EGP1|GA733-1|GA7331|GP50|M1S1|TROP2 tumor associated calcium signal transducer 2 protein-coding chr1-1214 chr1 231140084 231140294 + 25.0 0.000 Intergenic Intergenic -22739 NM_001004342 440730 Hs.655089 NM_001004342 ENSG00000119283 TRIM67 TNL tripartite motif containing 67 protein-coding chr3-559 chr3 170870199 170870409 + 25.0 0.000 promoter-TSS (NM_001320451) promoter-TSS (NM_001320451) -109 NR_135259 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr22-360 chr22 38314710 38314920 + 25.0 0.000 intron (NM_001289912, intron 5 of 14) intron (NM_001289912, intron 5 of 14) 2618 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr7-395 chr7 151727741 151727951 + 25.0 0.000 intron (NM_016203, intron 3 of 15) intron (NM_016203, intron 3 of 15) 8417 NM_001363698 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr5-592 chr5 138911583 138911793 + 25.0 0.000 intron (NM_001324009, intron 5 of 12) MLT1D|LTR|ERVL-MaLR 36288 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr9-784 chr9 95023577 95023787 + 25.0 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -41668 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr12-836 chr12 74338052 74338262 + 25.0 0.000 Intergenic Intergenic -45526 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr2-1113 chr2 171712183 171712393 + 25.0 0.000 intron (NM_001271787, intron 4 of 15) intron (NM_001271787, intron 4 of 15) 24533 NM_001271785 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr5-565 chr5 72556485 72556695 + 25.0 0.000 promoter-TSS (NR_105008) promoter-TSS (NR_105008) -487 NR_105008 102503427 Hs.429280 NR_105008 LOC102503427 - uncharacterized LOC102503427 ncRNA chr7-393 chr7 105012857 105013067 + 25.0 0.000 non-coding (NR_024586, exon 1 of 1) non-coding (NR_024586, exon 1 of 1) 1179 NR_024586 100216545 Hs.631150 NR_024586 KMT2E-AS1 - KMT2E antisense RNA 1 ncRNA chr4-582 chr4 23728512 23728722 + 25.0 0.000 Intergenic Intergenic 152675 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr17-822 chr17 48915931 48916141 + 25.0 0.000 intron (NM_023079, intron 3 of 6) intron (NM_023079, intron 3 of 6) -7053 NR_135674 105371814 Hs.655254 NR_135674 ENSG00000248278 LOC105371814 - uncharacterized LOC105371814 ncRNA chrX-84 chrX 47190676 47190886 + 25.0 0.000 promoter-TSS (NM_153280) promoter-TSS (NM_153280) -66 NM_153280 7317 Hs.533273 NM_003334 ENSG00000130985 UBA1 A1S9|A1S9T|A1ST|AMCX1|CFAP124|GXP1|POC20|SMAX2|UBA1A|UBE1|UBE1X ubiquitin like modifier activating enzyme 1 protein-coding chr2-1179 chr2 32485015 32485225 + 25.0 0.000 intron (NM_016252, intron 39 of 73) L1MC4|LINE|L1 -47033 NR_030285 693143 NR_030285 ENSG00000207653 MIR558 MIRN558|hsa-mir-558 microRNA 558 ncRNA chr5-459 chr5 171864103 171864313 + 25.0 0.000 intron (NM_012300, intron 12 of 12) intron (NM_012300, intron 12 of 12) 78336 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr9-672 chr9 127965639 127965849 + 25.0 0.000 intron (NM_001035254, intron 1 of 10) intron (NM_001035254, intron 1 of 10) -15030 NM_203305 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr11-686 chr11 11701103 11701313 + 25.0 0.000 Intergenic Intergenic -44486 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr16-145 chr16 2340731 2340941 + 25.0 0.000 promoter-TSS (NR_003574) promoter-TSS (NR_003574) -86 NR_003574 650655 Hs.376281 NR_003574 ENSG00000238098 ABCA17P ABCA17 ATP binding cassette subfamily A member 17, pseudogene pseudo chr22-213 chr22 43955247 43955457 + 25.0 0.000 promoter-TSS (NM_015380) promoter-TSS (NM_015380) -90 NM_015380 25813 Hs.505824 NM_015380 ENSG00000100347 SAMM50 CGI-51|OMP85|SAM50|TOB55|TRG-3|YNL026W SAMM50 sorting and assembly machinery component protein-coding chr1-2605 chr1 70510049 70510259 + 25.0 0.000 Intergenic Intergenic 98886 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr10-814 chr10 88952784 88952994 + 25.0 0.000 promoter-TSS (NM_001613) promoter-TSS (NM_001613) -116 NM_001613 59 Hs.500483 NM_001613 ENSG00000107796 ACTA2 ACTSA actin alpha 2, smooth muscle protein-coding chr2-1064 chr2 225076212 225076422 + 25.0 0.000 Intergenic Intergenic -33849 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr15-272 chr15 80059409 80059619 + 25.0 0.000 promoter-TSS (NM_001242912) promoter-TSS (NM_001242912) -54 NM_001242918 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr7-366 chr7 74079332 74079542 + 25.0 0.000 Intergenic Intergenic -4367 NM_002314 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr19-643 chr19 2327732 2327942 + 25.0 0.000 promoter-TSS (NM_152988) promoter-TSS (NM_152988) 749 NM_016199 51690 Hs.512610 NM_016199 ENSG00000130332 LSM7 YNL147W LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr5-299 chr5 126423180 126423390 + 25.0 0.000 promoter-TSS (NM_001349541) promoter-TSS (NM_001349541) -124 NR_146197 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr5-317 chr5 150000399 150000609 + 25.0 0.000 promoter-TSS (NM_001366501) promoter-TSS (NM_001366501) 150 NM_030953 81789 Hs.169333 NM_030953 ENSG00000164296 TIGD6 - tigger transposable element derived 6 protein-coding chr10-620 chr10 124992561 124992771 + 25.0 0.000 intron (NM_001290214, intron 10 of 10) intron (NM_001290214, intron 10 of 10) 13352 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr3-460 chr3 101862975 101863185 + 25.0 0.000 Intergenic L2a|LINE|L2 13566 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr16-458 chr16 2980414 2980624 + 25.0 0.000 promoter-TSS (NM_004203) promoter-TSS (NM_004203) -73 NM_001258451 9088 Hs.732385 NM_004203 ENSG00000127564 PKMYT1 MYT1|PPP1R126 protein kinase, membrane associated tyrosine/threonine 1 protein-coding chr1-1607 chr1 84940561 84940771 + 25.0 0.000 intron (NM_153259, intron 8 of 13) intron (NM_153259, intron 8 of 13) -47460 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding chr3-602 chr3 9884514 9884724 + 25.0 0.000 Intergenic Intergenic -4365 NM_001199551 63924 Hs.567562 NM_022094 ENSG00000187288 CIDEC CIDE-3|CIDE3|FPLD5|FSP27 cell death inducing DFFA like effector c protein-coding chr19-769 chr19 57240548 57240758 + 25.0 0.000 promoter-TSS (NM_001023563) promoter-TSS (NM_001023563) 21 NM_001023563 390980 Hs.22488 NM_001023563 ENSG00000204524 ZNF805 - zinc finger protein 805 protein-coding chr16-456 chr16 89363598 89363808 + 25.0 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) 42570 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr5-251 chr5 157731378 157731588 + 25.0 0.000 promoter-TSS (NM_017872) promoter-TSS (NM_017872) 63 NM_001317825 54974 Hs.353090 NM_017872 ENSG00000113272 THG1L ICF45|IHG-1|hTHG1 tRNA-histidine guanylyltransferase 1 like protein-coding chr1-889 chr1 48878458 48878668 + 25.0 0.000 intron (NM_001323575, intron 5 of 12) intron (NM_001323575, intron 5 of 12) -101594 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr9-661 chr9 5269189 5269399 + 25.0 0.000 Intergenic Intergenic 34934 NM_001329191 6019 Hs.127032 NM_005059 ENSG00000107014 RLN2 H2|H2-RLX|RLXH2|bA12D24.1.1|bA12D24.1.2 relaxin 2 protein-coding chr18-171 chr18 12597748 12597958 + 25.0 0.000 intron (NM_020148, intron 2 of 15) intron (NM_020148, intron 2 of 15) 58879 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr12-437 chr12 27244324 27244534 + 25.0 0.000 intron (NM_015000, intron 1 of 13) CpG 143 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr17-343 chr17 15999519 15999729 + 25.0 0.000 promoter-TSS (NM_001042698) promoter-TSS (NM_001042698) 80 NM_001042697 125150 Hs.593985 NM_001042697 ENSG00000214941 ZSWIM7 SWS1 zinc finger SWIM-type containing 7 protein-coding chr14-199 chr14 65282740 65282950 + 25.0 0.000 Intergenic Intergenic 52338 NR_039857 100616176 NR_039857 ENSG00000266740 MIR4708 mir-4708 microRNA 4708 ncRNA chr3-1029 chr3 146803741 146803951 + 25.0 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -118077 NR_135561 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr10-403 chr10 72676544 72676754 + 25.0 0.000 Intergenic Intergenic -15482 NM_138357 90550 Hs.591366 NM_138357 ENSG00000156026 MCU C10orf42|CCDC109A|HsMCU mitochondrial calcium uniporter protein-coding chr11-652 chr11 117222135 117222345 + 25.0 0.000 intron (NM_004716, intron 9 of 16) intron (NM_004716, intron 9 of 16) 9833 NM_004716 9159 Hs.648612 NM_004716 ENSG00000160613 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding chr1-1047 chr1 61157456 61157666 + 25.0 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 75000 NM_005595 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr3-966 chr3 81716996 81717206 + 25.0 0.000 intron (NM_000158, intron 1 of 15) intron (NM_000158, intron 1 of 15) 44544 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr3-283 chr3 50246459 50246669 + 25.0 0.000 promoter-TSS (NM_001166425) promoter-TSS (NM_001166425) -346 NM_001166425 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr3-1082 chr3 155946339 155946549 + 25.0 0.000 Intergenic MER119|DNA|hAT-Charlie 75794 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr4-255 chr4 305322 305532 + 25.0 0.000 promoter-TSS (NM_001137608) promoter-TSS (NM_001137608) 47 NM_001137608 654254 Hs.698668 NM_001137608 ENSG00000186777 ZNF732 - zinc finger protein 732 protein-coding chr17-817 chr17 41811836 41812046 + 25.0 0.000 promoter-TSS (NM_021939) promoter-TSS (NM_021939) 8 NM_006455 10609 Hs.446459 NM_006455 ENSG00000141696 P3H4 LEPREL4|NO55|NOL55|SC65 prolyl 3-hydroxylase family member 4 (non-enzymatic) protein-coding chr20-130 chr20 54510575 54510785 + 25.0 0.000 intron (NM_018431, intron 1 of 7) intron (NM_018431, intron 1 of 7) 35087 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr1-1507 chr1 21176909 21177119 + 25.0 0.000 promoter-TSS (NM_001198801) promoter-TSS (NM_001198801) -117 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr3-324 chr3 184568979 184569189 + 25.0 0.000 intron (NM_004443, intron 1 of 15) intron (NM_004443, intron 1 of 15) 7299 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr13-234 chr13 21054894 21055104 + 25.0 0.000 intron (NM_014572, intron 1 of 7) intron (NM_014572, intron 1 of 7) 6587 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr17-531 chr17 42682841 42683051 + 25.0 0.000 intron (NM_003632, intron 1 of 23) intron (NM_003632, intron 1 of 23) 415 NM_003632 8506 Hs.408730 NM_003632 ENSG00000108797 CNTNAP1 CASPR|CHN3|CNTNAP|NRXN4|P190 contactin associated protein 1 protein-coding chr7-737 chr7 66553721 66553931 + 25.0 0.000 non-coding (NR_111972, exon 5 of 5) non-coding (NR_111972, exon 5 of 5) 38581 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr7-471 chr7 99505145 99505355 + 25.0 0.000 promoter-TSS (NM_001318084) promoter-TSS (NM_001318084) 260 NM_014569 23660 Hs.110839 NM_014569 ENSG00000196652 ZKSCAN5 ZFP-95|ZFP95|ZNF914|ZSCAN37 zinc finger with KRAB and SCAN domains 5 protein-coding chr3-485 chr3 123499435 123499645 + 25.0 0.000 intron (NM_001329786, intron 5 of 5) intron (NM_001329786, intron 5 of 5) -50995 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr1-1806 chr1 180842182 180842392 + 25.0 0.000 intron (NM_004736, intron 11 of 14) intron (NM_004736, intron 11 of 14) -70610 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr18-103 chr18 57621818 57622028 + 25.0 0.000 promoter-TSS (NM_004539) promoter-TSS (NM_004539) -87 NM_004539 4677 Hs.465224 NM_004539 ENSG00000134440 NARS ASNRS|NARS1 asparaginyl-tRNA synthetase protein-coding chr8-183 chr8 41578052 41578262 + 25.0 0.000 promoter-TSS (NM_001363197) promoter-TSS (NM_001363197) -43 NM_001363198 137964 Hs.355753 NM_178819 ENSG00000158669 GPAT4 1-AGPAT 6|AGPAT6|LPAAT-zeta|LPAATZ|TSARG7 glycerol-3-phosphate acyltransferase 4 protein-coding chr8-334 chr8 78821191 78821401 + 25.0 0.000 Intergenic Intergenic -15773 NM_001199886 3574 Hs.591873 NM_000880 ENSG00000104432 IL7 IL-7 interleukin 7 protein-coding chr1-638 chr1 201885480 201885690 + 25.0 0.000 Intergenic Intergenic -3084 NR_030775 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr17-548 chr17 77400650 77400860 + 25.0 0.000 intron (NM_001113494, intron 1 of 10) intron (NM_001113494, intron 1 of 10) -3701 NR_036200 100422851 NR_036200 ENSG00000264060 MIR4316 - microRNA 4316 ncRNA chr9-1020 chr9 113485365 113485575 + 25.0 0.000 intron (NM_001282923, intron 4 of 22) intron (NM_001282923, intron 4 of 22) -15957 NM_001322214 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr5-473 chr5 137187177 137187387 + 25.0 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 59085 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr13-208 chr13 98571921 98572131 + 25.0 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) 5125 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr7-644 chr7 43119514 43119724 + 25.0 0.000 intron (NR_135295, intron 2 of 6) L2a|LINE|L2 1723 NR_135295 100127950 Hs.666610 NR_135295 ENSG00000181211 HECW1-IT1 - HECW1 intronic transcript 1 ncRNA chr17-414 chr17 4204756 4204966 + 25.0 0.000 intron (NR_047571, intron 6 of 23) intron (NR_047571, intron 6 of 23) 58986 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chr5-887 chr5 126007927 126008137 + 25.0 0.000 Intergenic Intergenic -171545 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr10-756 chr10 86687848 86688058 + 25.0 0.000 intron (NM_001368066, intron 6 of 14) intron (NM_001368066, intron 6 of 14) 19389 NM_001080116 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr3-442 chr3 51995876 51996086 + 25.0 0.000 promoter-TSS (NM_000992) promoter-TSS (NM_000992) -86 NM_000992 6159 Hs.425125 NM_000992 ENSG00000162244 RPL29 HIP|HUMRPL29|L29|RPL29P10|RPL29_3_370 ribosomal protein L29 protein-coding chr11-817 chr11 46675439 46675649 + 25.0 0.000 non-coding (NR_144422, exon 18 of 18) non-coding (NR_144422, exon 18 of 18) 25075 NM_004308 392 Hs.138860 NM_004308 ENSG00000175220 ARHGAP1 CDC42GAP|RHOGAP|RHOGAP1|p50rhoGAP Rho GTPase activating protein 1 protein-coding chr11-317 chr11 59669113 59669323 + 25.0 0.000 promoter-TSS (NM_152716) promoter-TSS (NM_152716) -181 NM_152716 219988 Hs.591960 NM_152716 ENSG00000166889 PATL1 Pat1b|hPat1b PAT1 homolog 1, processing body mRNA decay factor protein-coding chr4-116 chr4 88592253 88592463 + 25.0 0.000 promoter-TSS (NM_014606) promoter-TSS (NM_014606) -65 NM_001271602 8916 Hs.35804 NM_014606 ENSG00000138641 HERC3 - HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein-coding chr14-499 chr14 104827803 104828013 + 25.0 0.000 Intergenic Intergenic 6707 NR_024396 196872 Hs.352220 NR_024396 ENSG00000258701 LINC00638 - long intergenic non-protein coding RNA 638 ncRNA chr7-836 chr7 114889671 114889881 + 25.0 0.000 Intergenic Intergenic -32378 NM_001166345 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chrX-122 chrX 110383549 110383759 + 25.0 0.000 intron (NM_001171689, intron 2 of 7) L2c|LINE|L2 -35403 NM_020769 57529 Hs.201071 NM_020769 ENSG00000243978 RTL9 MAR9|MART9|RGAG1|SIRH10 retrotransposon Gag like 9 protein-coding chr9-735 chr9 131951927 131952137 + 25.0 0.000 intron (NM_001253881, intron 3 of 6) intron (NM_001253881, intron 3 of 6) 127835 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr1-1073 chr1 245969294 245969504 + 25.0 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 448013 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr12-363 chr12 121839525 121839735 + 25.0 0.000 3' UTR (NM_001171993, exon 16 of 16) 3' UTR (NM_001171993, exon 16 of 16) 19229 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr12-439 chr12 28711029 28711239 + 25.0 0.000 Intergenic Intergenic -438144 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr9-646 chr9 37943705 37943915 + 25.0 0.000 intron (NM_003028, intron 5 of 5) intron (NM_003028, intron 5 of 5) -39457 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr17-540 chr17 38900800 38901010 + 25.0 0.000 intron (NR_073384, intron 5 of 7) intron (NR_073384, intron 5 of 7) -14074 NR_106837 102465467 NR_106837 ENSG00000277057 MIR6779 hsa-mir-6779 microRNA 6779 ncRNA chr3-551 chr3 112391415 112391625 + 24.9 0.000 Intergenic Intergenic 58364 NR_158642 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding chr1-1549 chr1 240245407 240245617 + 24.9 0.000 intron (NM_020066, intron 6 of 17) intron (NM_020066, intron 6 of 17) 153629 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr7-429 chr7 123557835 123558045 + 24.9 0.000 promoter-TSS (NM_005000) promoter-TSS (NM_005000) -36 NR_104168 4698 Hs.651219 NM_005000 ENSG00000128609 NDUFA5 B13|CI-13KD-B|CI-13kB|NUFM|UQOR13 NADH:ubiquinone oxidoreductase subunit A5 protein-coding chr5-211 chr5 41925111 41925321 + 24.9 0.000 promoter-TSS (NM_033484) promoter-TSS (NM_033484) -36 NM_001297437 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding chr12-473 chr12 47377735 47377945 + 24.9 0.000 Intergenic Intergenic -13571 NR_039715 100616478 NR_039715 ENSG00000264906 MIR4494 - microRNA 4494 ncRNA chr14-407 chr14 77599904 77600114 + 24.9 0.000 intron (NM_004863, intron 1 of 11) intron (NM_004863, intron 1 of 11) 16758 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr15-63 chr15 42737145 42737355 + 24.9 0.000 promoter-TSS (NM_138477) promoter-TSS (NM_138477) -122 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr17-833 chr17 72407683 72407893 + 24.9 0.000 intron (NR_036488, intron 3 of 3) intron (NR_036488, intron 3 of 3) 64977 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr2-661 chr2 86441237 86441447 + 24.9 0.000 promoter-TSS (NM_001146688) promoter-TSS (NM_001146688) -29 NM_018433 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr13-450 chr13 59744977 59745187 + 24.9 0.000 intron (NM_001258366, intron 26 of 26) intron (NM_001258366, intron 26 of 26) -267636 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr7-497 chr7 1579631 1579841 + 24.9 0.000 intron (NR_027328, intron 3 of 3) G-rich|Low_complexity|Low_complexity 9663 NR_027328 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr4-400 chr4 7828393 7828603 + 24.9 0.000 intron (NM_198595, intron 6 of 16) intron (NM_198595, intron 6 of 16) 43810 NM_001371090 chr1-798 chr1 205631953 205632163 + 24.9 0.000 5' UTR (NM_001973, exon 1 of 5) 5' UTR (NM_001973, exon 1 of 5) 814 NM_021795 2005 Hs.497520 NM_001973 ENSG00000158711 ELK4 SAP1 ETS transcription factor ELK4 protein-coding chr11-733 chr11 6474132 6474342 + 24.9 0.000 promoter-TSS (NM_033278) promoter-TSS (NM_033278) 222 NM_001248006 10612 Hs.591992 NM_006458 ENSG00000110171 TRIM3 BERP|HAC1|RNF22|RNF97 tripartite motif containing 3 protein-coding chr20-353 chr20 35232588 35232798 + 24.9 0.000 intron (NM_006690, intron 1 of 8) L2c|LINE|L2 6003 NM_006690 10893 Hs.715494 NM_006690 ENSG00000125966 MMP24 MMP-24|MMP25|MT-MMP 5|MT-MMP5|MT5-MMP|MT5MMP|MTMMP5 matrix metallopeptidase 24 protein-coding chr6-242 chr6 142568988 142569198 + 24.9 0.000 intron (NR_027312, intron 1 of 2) MamRep605|LTR?|LTR? 68743 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr12-484 chr12 49088343 49088553 + 24.9 0.000 3' UTR (NM_021044, exon 3 of 3) 3' UTR (NM_021044, exon 3 of 3) 6353 NM_021044 50846 Hs.524382 NM_021044 ENSG00000139549 DHH GDXYM|HHG-3|SRXY7 desert hedgehog signaling molecule protein-coding chr17-673 chr17 30831918 30832128 + 24.9 0.000 promoter-TSS (NM_024857) promoter-TSS (NM_024857) 57 NM_024857 79915 Hs.528902 NM_024857 ENSG00000176208 ATAD5 C17orf41|ELG1|FRAG1 ATPase family AAA domain containing 5 protein-coding chr11-481 chr11 33780197 33780407 + 24.9 0.000 Intergenic Intergenic 5603 NR_120550 101928440 Hs.202343 NR_120550 ENSG00000254508 FBXO3-DT FBXO3-AS1 FBXO3 divergent transcript ncRNA chr17-954 chr17 48486629 48486839 + 24.9 0.000 Intergenic Intergenic 41901 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 - uncharacterized LOC101927166 ncRNA chr3-707 chr3 142275785 142275995 + 24.9 0.000 Intergenic L2|LINE|L2 -50305 NM_001039547 256356 Hs.135904 NM_152776 ENSG00000175066 GK5 - glycerol kinase 5 protein-coding chr12-416 chr12 57149340 57149550 + 24.9 0.000 intron (NM_002332, intron 6 of 88) intron (NM_002332, intron 6 of 88) -1826 NR_131939 105751187 Hs.609540 NR_131938 ENSG00000259125 LRP1-AS - LRP1 antisense RNA ncRNA chr1-1177 chr1 1883421 1883631 + 24.9 0.000 intron (NM_001282538, intron 1 of 9) intron (NM_001282538, intron 1 of 9) 7561 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr1-1128 chr1 159798964 159799174 + 24.9 0.000 Intergenic Intergenic -1443 NM_001284217 343413 Hs.196955 NM_001004310 ENSG00000181036 FCRL6 FcRH6 Fc receptor like 6 protein-coding chr19-734 chr19 4086826 4087036 + 24.9 0.000 Intergenic AluSx1|SINE|Alu -20032 NM_015898 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr3-661 chr3 134331504 134331714 + 24.9 0.000 Intergenic Intergenic 18033 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr3-358 chr3 112562278 112562488 + 24.9 0.000 promoter-TSS (NM_022488) promoter-TSS (NM_022488) 338 NM_001348907 55032 Hs.237480 NM_017945 ENSG00000138459 SLC35A5 - solute carrier family 35 member A5 protein-coding chr17-680 chr17 43024392 43024602 + 24.9 0.000 promoter-TSS (NM_005440) promoter-TSS (NM_005440) -734 NM_005440 8153 Hs.603111 NM_005440 ENSG00000108830 RND2 ARHN|RHO7|RhoN Rho family GTPase 2 protein-coding chr9-681 chr9 34126597 34126807 + 24.9 0.000 promoter-TSS (NM_015397) promoter-TSS (NM_015397) -4 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr18-88 chr18 58671353 58671563 + 24.9 0.000 promoter-TSS (NM_173844) promoter-TSS (NM_173844) -7 NM_006785 10892 Hs.601217 NM_006785 ENSG00000172175 MALT1 IMD12|MLT|MLT1|PCASP1 MALT1 paracaspase protein-coding chr4-220 chr4 53962773 53962983 + 24.9 0.000 Intergenic Intergenic 24404 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr11-602 chr11 63531438 63531648 + 24.9 0.000 Intergenic MER66C|LTR|ERV1 -5265 NM_004585 5920 Hs.17466 NM_004585 ENSG00000133321 PLAAT4 HRASLS4|HRSL4|PLA1/2-3|PLAAT-4|RARRES3|RIG1|TIG3 phospholipase A and acyltransferase 4 protein-coding chr3-337 chr3 119498247 119498457 + 24.9 0.000 promoter-TSS (NM_016589) promoter-TSS (NM_016589) -195 NM_016589 51300 Hs.477287 NM_016589 ENSG00000113845 TIMMDC1 C3orf1|MC1DN31 translocase of inner mitochondrial membrane domain containing 1 protein-coding chr11-667 chr11 45858100 45858310 + 24.9 0.000 intron (NM_001127457, intron 2 of 11) intron (NM_001127457, intron 2 of 11) 10730 NM_021117 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr2-1466 chr2 53767540 53767750 + 24.9 0.000 promoter-TSS (NM_001346127) promoter-TSS (NM_001346127) -138 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr1-1392 chr1 163231492 163231702 + 24.9 0.000 intron (NM_001254748, intron 2 of 5) intron (NM_001254748, intron 2 of 5) -28681 NM_001254749 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr11-1194 chr11 106926434 106926644 + 24.9 0.000 intron (NM_001256424, intron 4 of 8) L3|LINE|CR1 91937 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr11-513 chr11 10857805 10858015 + 24.9 0.000 promoter-TSS (NR_034137) promoter-TSS (NR_034137) 143 NM_001143667 58486 Hs.655066 NM_021211 ENSG00000236287 ZBED5 Buster1 zinc finger BED-type containing 5 protein-coding chr5-533 chr5 69093827 69094037 + 24.9 0.000 promoter-TSS (NM_024055) promoter-TSS (NM_024055) -82 NM_022902 64924 Hs.631975 NM_022902 ENSG00000145740 SLC30A5 ZNT5|ZNTL1|ZTL1|ZnT-5 solute carrier family 30 member 5 protein-coding chr17-484 chr17 64507426 64507636 + 24.9 0.000 promoter-TSS (NM_001320595) promoter-TSS (NM_001320595) 554 NM_001316990 90799 Hs.569713 NM_138363 ENSG00000258890 CEP95 CCDC45 centrosomal protein 95 protein-coding chr1-2083 chr1 54167748 54167958 + 24.9 0.000 Intergenic Intergenic -14672 NM_201546 200008 NM_201546 ENSG00000157211 CDCP2 - CUB domain containing protein 2 protein-coding chr11-884 chr11 94732173 94732383 + 24.9 0.000 intron (NR_135096, intron 1 of 6) intron (NR_135096, intron 1 of 6) 8077 NR_135096 105369438 Hs.568921 NR_135093 ENSG00000255929 LOC105369438 - uncharacterized LOC105369438 ncRNA chr2-1194 chr2 132623528 132623738 + 24.9 0.000 intron (NM_001508, intron 1 of 1) MIR3|SINE|MIR 46572 NM_001321235 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr13-45 chr13 49691340 49691550 + 24.9 0.000 promoter-TSS (NM_001278636) promoter-TSS (NM_001278636) 41 NM_032565 84650 Hs.433278 NM_032565 ENSG00000123179 EBPL EBRP EBP like protein-coding chr10-517 chr10 114261224 114261434 + 24.9 0.000 intron (NM_001272046, intron 5 of 13) intron (NM_001272046, intron 5 of 13) 21715 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr16-354 chr16 30896815 30897025 + 24.9 0.000 intron (NM_001142544, intron 1 of 2) intron (NM_001142544, intron 1 of 2) 306 NM_001142544 1489 Hs.483811 NM_001330 ENSG00000150281 CTF1 CT-1|CT1 cardiotrophin 1 protein-coding chr20-161 chr20 35147277 35147487 + 24.9 0.000 promoter-TSS (NM_018217) promoter-TSS (NM_018217) -46 NR_026728 55741 Hs.720177 NM_018217 ENSG00000088298 EDEM2 C20orf31|C20orf49|bA4204.1 ER degradation enhancing alpha-mannosidase like protein 2 protein-coding chr7-838 chr7 134766941 134767151 + 24.9 0.000 Intergenic Intergenic -12588 NM_033157 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr15-410 chr15 101179797 101180007 + 24.9 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 72146 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr2-1881 chr2 67917469 67917679 + 24.9 0.000 Intergenic Intergenic -92012 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr1-1342 chr1 6520148 6520358 + 24.9 0.000 promoter-TSS (NM_198681) promoter-TSS (NM_198681) -192 NM_198681 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr3-272 chr3 132417346 132417556 + 24.9 0.000 promoter-TSS (NM_015268) promoter-TSS (NM_015268) -51 NM_001329126 23317 Hs.12707 NM_015268 ENSG00000138246 DNAJC13 PARK21|RME8 DnaJ heat shock protein family (Hsp40) member C13 protein-coding chr2-542 chr2 43773922 43774132 + 24.9 0.000 promoter-TSS (NM_001193464) promoter-TSS (NM_001193464) -12 NM_016008 51626 Hs.371597 NM_015522 ENSG00000138036 DYNC2LI1 CGI-60|D2LIC|LIC3 dynein cytoplasmic 2 light intermediate chain 1 protein-coding chr5-811 chr5 134552353 134552563 + 24.9 0.000 intron (NM_015288, intron 4 of 10) MIR|SINE|MIR 26350 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr5-343 chr5 16809800 16810010 + 24.9 0.000 intron (NM_012334, intron 3 of 40) intron (NM_012334, intron 3 of 40) 126383 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr11-573 chr11 99370883 99371093 + 24.9 0.000 intron (NM_001243271, intron 2 of 20) intron (NM_001243271, intron 2 of 20) -185157 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr17-450 chr17 77308979 77309189 + 24.9 0.000 intron (NM_001113491, intron 2 of 11) intron (NM_001113491, intron 2 of 11) -10431 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr19-763 chr19 45614309 45614519 + 24.9 0.000 intron (NR_147901, intron 19 of 20) intron (NR_147901, intron 19 of 20) -12202 NM_005282 2828 Hs.17170 NM_005282 ENSG00000177464 GPR4 - G protein-coupled receptor 4 protein-coding chr9-493 chr9 113564870 113565080 + 24.9 0.000 promoter-TSS (NM_134427) promoter-TSS (NM_134427) 21 NM_134427 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr12-359 chr12 101936219 101936429 + 24.9 0.000 Intergenic Intergenic 58744 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr4-286 chr4 40673051 40673261 + 24.9 0.000 Intergenic Intergenic -42562 NM_001371114 chr11-613 chr11 124622692 124622902 + 24.9 0.000 promoter-TSS (NR_016021) promoter-TSS (NR_016021) -67 NR_016021 84897 Hs.436410 NM_032811 ENSG00000154144 TBRG1 NIAM|TB-5 transforming growth factor beta regulator 1 protein-coding chr17-683 chr17 48068537 48068747 + 24.9 0.000 Intergenic Intergenic 20283 NM_001330262 4779 Hs.514284 NM_003204 ENSG00000082641 NFE2L1 LCR-F1|NRF1|TCF11 nuclear factor, erythroid 2 like 1 protein-coding chr2-461 chr2 11863920 11864130 + 24.9 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -27039 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA chr16-449 chr16 58638349 58638559 + 24.9 0.000 Intergenic LTR8B|LTR|ERV1 -8628 NM_016284 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr11-855 chr11 61129944 61130154 + 24.9 0.000 TTS (NM_017966) TTS (NM_017966) 27560 NM_014207 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr7-978 chr7 45874809 45875019 + 24.9 0.000 Intergenic L1M5|LINE|L1 -13574 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding chr6-215 chr6 7261246 7261456 + 24.9 0.000 Intergenic CpG 51848 NM_003144 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr11-609 chr11 76783042 76783252 + 24.9 0.000 promoter-TSS (NM_015516) promoter-TSS (NM_015516) -85 NR_120562 101928837 Hs.656851 NR_120561 ENSG00000255100 LOC101928837 - uncharacterized LOC101928837 ncRNA chr1-709 chr1 28648940 28649150 + 24.9 0.000 TTS (NR_146731) TTS (NR_146731) 445 NR_004407 26824 Hs.640266 NR_004407 ENSG00000274978 RNU11 RNU11-1|U11 RNA, U11 small nuclear snRNA chr6-323 chr6 63573768 63573978 + 24.9 0.000 intron (NM_003463, intron 1 of 5) intron (NM_003463, intron 1 of 5) 1861 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr11-508 chr11 119381589 119381799 + 24.9 0.000 promoter-TSS (NR_034160) promoter-TSS (NR_034160) -4 NM_001243759 9099 Hs.524085 NM_004205 ENSG00000036672 USP2 UBP41|USP9 ubiquitin specific peptidase 2 protein-coding chr13-303 chr13 48892366 48892576 + 24.9 0.000 Intergenic Intergenic -83441 NM_001079673 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr20-176 chr20 25179055 25179265 + 24.7 0.000 Intergenic AluJb|SINE|Alu -16510 NM_001322393 955 Hs.500375 NM_001247 ENSG00000197586 ENTPD6 CD39L2|IL-6SAG|IL6ST2|NTPDase-6|dJ738P15.3 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding chr1-644 chr1 14968643 14968853 + 24.7 0.000 intron (NM_001370231, intron 3 of 8) intron (NM_001370231, intron 3 of 8) 22829 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr5-625 chr5 135208928 135209138 + 24.7 0.000 intron (NR_161235, intron 3 of 5) intron (NR_161235, intron 3 of 5) 39144 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr3-531 chr3 12135036 12135246 + 24.7 0.000 intron (NM_133625, intron 1 of 12) intron (NM_133625, intron 1 of 12) 23771 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr2-796 chr2 227325142 227325352 + 24.7 0.000 promoter-TSS (NR_102266) promoter-TSS (NR_102266) -4 NM_001277063 56947 Hs.471528 NM_020194 ENSG00000168958 MFF C2orf33|EMPF2|GL004 mitochondrial fission factor protein-coding chr22-361 chr22 46003303 46003513 + 24.7 0.000 Intergenic Intergenic -3208 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo KI270832.1-1 KI270832.1 145681 145891 + 24.7 0.000 NA NA NA NA chr3-700 chr3 57129022 57129232 + 24.7 0.000 intron (NM_001318864, intron 2 of 13) intron (NM_001318864, intron 2 of 13) 36226 NM_017563 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding chr6-606 chr6 134168159 134168369 + 24.7 0.000 TTS (NM_001143676) TTS (NM_001143676) 6602 NM_001291995 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr6-139 chr6 25992630 25992840 + 24.7 0.000 Intergenic CpG 25077 NM_005325 3024 Hs.150206 NM_005325 ENSG00000124610 HIST1H1A H1.1|H1A|H1F1|HIST1 histone cluster 1 H1 family member a protein-coding chr10-661 chr10 6275417 6275627 + 24.7 0.000 Intergenic Intergenic -51022 NR_040079 399715 NR_040079 ENSG00000215244 LINC02649 - long intergenic non-protein coding RNA 2649 ncRNA chr20-202 chr20 57991476 57991686 + 24.7 0.000 Intergenic Intergenic -12323 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr8-324 chr8 93700216 93700426 + 24.7 0.000 promoter-TSS (NR_104268) promoter-TSS (NR_104268) 112 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr9-1231 chr9 134159183 134159393 + 24.7 0.000 3' UTR (NM_017588, exon 14 of 14) 3' UTR (NM_017588, exon 14 of 14) 5276 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr7-616 chr7 116317284 116317494 + 24.7 0.000 Intergenic Intergenic -30662 NR_130922 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr22-229 chr22 45587863 45588073 + 24.7 0.000 intron (NM_006486, intron 16 of 16) L2a|LINE|L2 17679 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr1-1115 chr1 22452584 22452794 + 24.7 0.000 5' UTR (NM_001083621, exon 2 of 19) 5' UTR (NM_001083621, exon 2 of 19) 838 NM_014870 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr9-319 chr9 132669785 132669995 + 24.7 0.000 promoter-TSS (NM_012204) promoter-TSS (NM_012204) 93 NM_001322341 64794 Hs.660767 NM_022779 ENSG00000125485 DDX31 PPP1R25 DEAD-box helicase 31 protein-coding chr3-469 chr3 73484632 73484842 + 24.7 0.000 intron (NM_015009, intron 3 of 9) MER5A1|DNA|hAT-Charlie -10105 NM_001303141 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr2-744 chr2 46068005 46068215 + 24.7 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -229297 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr10-699 chr10 73816187 73816397 + 24.7 0.000 3' UTR (NM_001367524, exon 19 of 19) 3' UTR (NM_001367524, exon 19 of 19) -4472 NR_160744 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr5-377 chr5 135269940 135270150 + 24.7 0.000 intron (NR_161235, intron 3 of 5) MER131|DNA?|DNA? -21868 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr12-185 chr12 52147296 52147506 + 24.7 0.000 Intergenic Intergenic 44613 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr22-293 chr22 17628754 17628964 + 24.7 0.000 promoter-TSS (NM_001039367) promoter-TSS (NM_001039367) -37 NM_001039366 529 Hs.517338 NM_001696 ENSG00000131100 ATP6V1E1 ARCL2C|ATP6E|ATP6E2|ATP6V1E|P31|Vma4 ATPase H+ transporting V1 subunit E1 protein-coding chr19-892 chr19 13492173 13492383 + 24.7 0.000 intron (NM_023035, intron 1 of 46) L1MC5a|LINE|L1 14182 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr2-556 chr2 676129 676339 + 24.7 0.000 5' UTR (NM_001352680, exon 2 of 6) 5' UTR (NM_001352680, exon 2 of 6) 470 NM_001352681 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr1-821 chr1 145849834 145850044 + 24.7 0.000 TTS (NR_106794) TTS (NR_106794) 706 NR_106794 102466191 NR_106794 ENSG00000278549 MIR6736 hsa-mir-6736 microRNA 6736 ncRNA chr13-108 chr13 77329180 77329390 + 24.7 0.000 Intergenic CpG -2191 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr1-1222 chr1 10451386 10451596 + 24.7 0.000 non-coding (NR_037187, exon 3 of 3) non-coding (NR_037187, exon 3 of 3) 1460 NM_001302 1325 Hs.412311 NM_001302 ENSG00000241563 CORT CST-14|CST-17|CST-29 cortistatin protein-coding chrX-82 chrX 119512622 119512832 + 24.7 0.000 Intergenic MIRc|SINE|MIR -43607 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr18-130 chr18 36153148 36153358 + 24.7 0.000 intron (NM_001324467, intron 11 of 20) MER4B-int|LTR|ERV1 23354 NM_001242877 55250 Hs.8739 NM_018255 ENSG00000134759 ELP2 MRT58|SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding chr2-868 chr2 207513987 207514197 + 24.7 0.000 Intergenic Intergenic -15870 NR_163947 chr22-283 chr22 39040706 39040916 + 24.7 0.000 promoter-TSS (NM_001006666) promoter-TSS (NM_001006666) -53 NM_001006666 200316 Hs.659809 NM_145298 ENSG00000128394 APOBEC3F A3F|ARP8|BK150C2.4.MRNA|KA6 apolipoprotein B mRNA editing enzyme catalytic subunit 3F protein-coding chr12-534 chr12 132638654 132638864 + 24.7 0.000 intron (NM_006231, intron 40 of 48) intron (NM_006231, intron 40 of 48) 19983 NM_174872 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr13-226 chr13 48400854 48401064 + 24.7 0.000 intron (NM_000321, intron 17 of 26) intron (NM_000321, intron 17 of 26) 12154 NM_001162498 10161 Hs.123464 NM_005767 ENSG00000139679 LPAR6 ARWH1|HYPT8|LAH3|P2RY5|P2Y5 lysophosphatidic acid receptor 6 protein-coding chr10-515 chr10 102777182 102777392 + 24.7 0.000 intron (NM_017787, intron 1 of 3) intron (NM_017787, intron 1 of 3) 1066 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr19-585 chr19 43595934 43596144 + 24.7 0.000 promoter-TSS (NM_024327) promoter-TSS (NM_024327) 96 NM_001007561 126298 Hs.6217 NM_001007561 ENSG00000167378 IRGQ FKSG27|IRGQ1 immunity related GTPase Q protein-coding chr6-600 chr6 53302813 53303023 + 24.7 0.000 intron (NM_001242830, intron 1 of 6) intron (NM_001242830, intron 1 of 6) 25925 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr17-184 chr17 18225376 18225586 + 24.7 0.000 promoter-TSS (NM_004140).2 promoter-TSS (NM_004140).2 -154 NM_004140 3996 Hs.513983 NM_004140 ENSG00000131899 LLGL1 DLG4|HUGL|HUGL-1|HUGL1|LLGL|Lgl1|Mgl1 LLGL scribble cell polarity complex component 1 protein-coding chr10-438 chr10 119190378 119190588 + 24.7 0.000 Intergenic L2b|LINE|L2 -11671 NR_126102 10935 Hs.523302 NM_006793 ENSG00000165672 PRDX3 AOP-1|AOP1|HBC189|MER5|PRO1748|SP-22|prx-III peroxiredoxin 3 protein-coding chr1-988 chr1 203693182 203693392 + 24.7 0.000 intron (NM_001001396, intron 2 of 21) intron (NM_001001396, intron 2 of 21) -36294 NR_003019 677843 Hs.676135 NR_003019 ENSG00000221643 SNORA77 ACA63|SNORA77A small nucleolar RNA, H/ACA box 77 snoRNA chr7-515 chr7 134127375 134127585 + 24.7 0.000 exon (NM_001365701, exon 1 of 16) exon (NM_001365701, exon 1 of 16) 140 NM_001365701 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr7-738 chr7 66770200 66770410 + 24.7 0.000 intron (NM_001367724, intron 2 of 8) intron (NM_001367724, intron 2 of 8) 14423 NM_001287061 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr4-321 chr4 186145011 186145221 + 24.7 0.000 intron (NM_015398, intron 1 of 13) CpG 229 NM_015398 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr9-574 chr9 83477663 83477873 + 24.7 0.000 intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) -10026 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr8-284 chr8 26640985 26641195 + 24.7 0.000 intron (NM_001244604, intron 8 of 13) intron (NM_001244604, intron 8 of 13) 62685 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr12-210 chr12 132710583 132710793 + 24.7 0.000 promoter-TSS (NM_001170543) promoter-TSS (NM_001170543) -154 NM_001170544 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr17-674 chr17 31627976 31628186 + 24.7 0.000 Intergenic L1ME3B|LINE|L1 52670 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr3-727 chr3 50068273 50068483 + 24.7 0.000 intron (NM_001349194, intron 14 of 17) intron (NM_001349194, intron 14 of 17) -20541 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr1-479 chr1 1471618 1471828 + 24.7 0.000 promoter-TSS (NM_031921) promoter-TSS (NM_031921) -42 NM_031921 83858 Hs.729021 NM_031921 ENSG00000160072 ATAD3B AAA-TOB3|TOB3 ATPase family AAA domain containing 3B protein-coding chr3-325 chr3 33114379 33114589 + 24.7 0.000 exon (NM_006371, exon 1 of 7) exon (NM_006371, exon 1 of 7) 526 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr22-412 chr22 17922820 17923030 + 24.7 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) -16039 NM_001122731 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr1-834 chr1 234608173 234608383 + 24.7 0.000 intron (NM_001077397, intron 1 of 1) intron (NM_001077397, intron 1 of 1) 1247 NM_001077397 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr8-163 chr8 85245491 85245701 + 24.7 0.000 5' UTR (NM_198584, exon 1 of 7) 5' UTR (NM_198584, exon 1 of 7) 138 NM_198584 377677 Hs.127189 NM_198584 ENSG00000185015 CA13 CAXIII carbonic anhydrase 13 protein-coding chr14-273 chr14 69719537 69719747 + 24.7 0.000 Intergenic Intergenic -47500 NM_001039465 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr11-1212 chr11 5620823 5621033 + 24.7 0.000 intron (NM_001003827, intron 1 of 7) intron (NM_001003827, intron 1 of 7) 984 NM_001003827 53840 Hs.729048 NM_021616 ENSG00000258659 TRIM34 IFP1|RNF21 tripartite motif containing 34 protein-coding chr5-513 chr5 103849953 103850163 + 24.7 0.000 Intergenic Intergenic -287269 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr16-539 chr16 83305150 83305360 + 24.7 0.000 intron (NM_001220489, intron 4 of 12) intron (NM_001220489, intron 4 of 12) -203091 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr17-326 chr17 42554623 42554833 + 24.7 0.000 promoter-TSS (NR_144402) promoter-TSS (NR_144402) 74 NR_144402 108783654 Hs.655222 NR_144402 ENSG00000266962 LOC108783654 - uncharacterized LOC108783654 ncRNA chr6-589 chr6 158170814 158171024 + 24.7 0.000 intron (NM_207118, intron 2 of 2) intron (NM_207118, intron 2 of 2) 2572 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr17-370 chr17 81329605 81329815 + 24.7 0.000 Intergenic Intergenic -20462 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr5-492 chr5 76806233 76806443 + 24.7 0.000 Intergenic Intergenic -12692 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr9-908 chr9 86585632 86585842 + 24.7 0.000 Intergenic Intergenic -231327 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr2-349 chr2 180125667 180125877 + 24.7 0.000 Intergenic Intergenic -118475 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr15-480 chr15 98860471 98860681 + 24.7 0.000 intron (NM_000875, intron 2 of 20) Tigger15a|DNA|TcMar-Tigger 76150 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr16-520 chr16 75264077 75264287 + 24.7 0.000 intron (NM_001170720, intron 1 of 7) intron (NM_001170720, intron 1 of 7) 1825 NM_001170720 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr4-462 chr4 158873900 158874110 + 24.7 0.000 intron (NM_001346043, intron 13 of 15) intron (NM_001346043, intron 13 of 15) 68166 NM_001323916 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr12-1331 chr12 89073191 89073401 + 24.7 0.000 Intergenic Intergenic -53604 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr16-381 chr16 2251584 2251794 + 24.7 0.000 promoter-TSS (NM_001919) promoter-TSS (NM_001919) -102 NM_001919 1632 Hs.403436 NM_001919 ENSG00000167969 ECI1 DCI enoyl-CoA delta isomerase 1 protein-coding chr2-1239 chr2 100958180 100958390 + 24.7 0.000 intron (NM_002518, intron 7 of 20) intron (NM_002518, intron 7 of 20) 18876 NR_110213 101927142 Hs.656556 NR_110213 LOC101927142 - uncharacterized LOC101927142 ncRNA chr6-325 chr6 116371507 116371717 + 24.7 0.000 non-coding (NR_148944, exon 1 of 1) non-coding (NR_148944, exon 1 of 1) 107 NR_148944 100287467 Hs.458358 NR_148944 LOC100287467 - uncharacterized LOC100287467 ncRNA chr5-466 chr5 73115581 73115791 + 24.7 0.000 Intergenic Intergenic -4889 NM_001161342 134285 Hs.162246 NM_173490 ENSG00000157111 TMEM171 PRP2 transmembrane protein 171 protein-coding chr17-663 chr17 42937834 42938044 + 24.7 0.000 Intergenic Intergenic 26515 NM_001261434 80755 Hs.317403 NM_001261434 ENSG00000266967 AARSD1 - alanyl-tRNA synthetase domain containing 1 protein-coding chr17-912 chr17 78032291 78032501 + 24.7 0.000 intron (NM_018996, intron 3 of 20) HAL1|LINE|L1 28159 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr17-474 chr17 901512 901722 + 24.7 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -8015 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr11-757 chr11 12800157 12800367 + 24.7 0.000 intron (NM_021961, intron 3 of 12) MIRc|SINE|MIR 125841 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr5-560 chr5 16712869 16713079 + 24.7 0.000 intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -95916 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr8-123 chr8 144147132 144147342 + 24.7 0.000 promoter-TSS (NM_032450) promoter-TSS (NM_032450) -779 NM_001099281 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr2-1710 chr2 200810341 200810551 + 24.7 0.000 intron (NR_110275, intron 1 of 3) L2c|LINE|L2 -1100 NM_014670 9689 Hs.355983 NM_014670 ENSG00000082153 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding chr14-402 chr14 53640747 53640957 + 24.7 0.000 Intergenic Mam_R4|LINE|Dong-R4 307632 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr17-687 chr17 58659358 58659568 + 24.7 0.000 intron (NM_031272, intron 1 of 31) CpG 32592 NM_001201457 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113|SPGF23 testis expressed 14, intercellular bridge forming factor protein-coding chr16-355 chr16 31459515 31459725 + 24.7 0.000 exon (NM_001105247, exon 1 of 6) exon (NM_001105247, exon 1 of 6) 624 NM_024742 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding chr8-337 chr8 102528663 102528873 + 24.7 0.000 Intergenic (GTGCTGT)n|Simple_repeat|Simple_repeat -22821 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr11-822 chr11 65330058 65330268 + 24.7 0.000 Intergenic Intergenic -3689 NM_006268 5977 Hs.13495 NM_006268 ENSG00000133884 DPF2 CSS7|REQ|UBID4|ubi-d4 double PHD fingers 2 protein-coding chr9-756 chr9 92738730 92738940 + 24.7 0.000 intron (NM_001003800, intron 1 of 6) intron (NM_001003800, intron 1 of 6) 25998 NM_001003800 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chrX-96 chrX 118495397 118495607 + 24.7 0.000 promoter-TSS (NM_144658) promoter-TSS (NM_144658) -407 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chrX-78 chrX 57121402 57121612 + 24.7 0.000 promoter-TSS (NM_001006683) promoter-TSS (NM_001006683) 39 NM_001006681 474343 Hs.460717 NM_001006681 ENSG00000186787 SPIN2B SPIN-2|SPIN-2B|SPIN2_duplicate|TDRD26|dJ323P24.2 spindlin family member 2B protein-coding chr19-703 chr19 47719063 47719273 + 24.7 0.000 intron (NM_014601, intron 3 of 5) intron (NM_014601, intron 3 of 5) 5746 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr5-298 chr5 115544630 115544840 + 24.7 0.000 promoter-TSS (NM_020177) promoter-TSS (NM_020177) 40 NM_020177 56929 Hs.47367 NM_020177 ENSG00000145780 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog C protein-coding chr5-668 chr5 159947815 159948025 + 24.7 0.000 intron (NM_000679, intron 1 of 1) intron (NM_000679, intron 1 of 1) 31438 NM_000679 147 Hs.368632 NM_000679 ENSG00000170214 ADRA1B ADRA1|ALPHA1BAR adrenoceptor alpha 1B protein-coding chr7-633 chr7 130489118 130489328 + 24.7 0.000 non-coding (NR_004382, exon 2 of 2) non-coding (NR_004382, exon 2 of 2) 1949 NR_004382 317751 Hs.627349 NR_004382 MESTIT1 MEST-AS1|MEST-IT|MEST-IT1|NCRNA00040|PEG1-AS MEST intronic transcript 1, antisense RNA ncRNA chr5-266 chr5 139341703 139341913 + 24.7 0.000 promoter-TSS (NR_109830) promoter-TSS (NR_109830) -24 NR_109830 51247 Hs.396644 NM_016480 ENSG00000120727 PAIP2 PAIP-2|PAIP2A poly(A) binding protein interacting protein 2 protein-coding chr1-1133 chr1 200640103 200640313 + 24.7 0.000 TTS (NM_001320181) TTS (NM_001320181) -19457 NM_014875 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding chr9-769 chr9 126791380 126791590 + 24.7 0.000 Intergenic Charlie8|DNA|hAT-Charlie -13521 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr6-195 chr6 99515295 99515505 + 24.7 0.000 promoter-TSS (NM_001346030) promoter-TSS (NM_001346030) 23 NM_001346022 85015 Hs.143410 NM_032929 ENSG00000123552 USP45 - ubiquitin specific peptidase 45 protein-coding chr15-219 chr15 82046139 82046349 + 24.7 0.000 promoter-TSS (NM_032246) promoter-TSS (NM_032246) -226 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr12-275 chr12 89524641 89524851 + 24.7 0.000 promoter-TSS (NM_003774) promoter-TSS (NM_003774) 50 NM_003774 8693 Hs.25130 NM_003774 ENSG00000257594 GALNT4 GALNAC-T4|GALNACT4 polypeptide N-acetylgalactosaminyltransferase 4 protein-coding chr19-773 chr19 2051354 2051564 + 24.6 0.000 promoter-TSS (NM_017572) promoter-TSS (NM_017572) -215 NM_199054 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr4-466 chr4 4792506 4792716 + 24.6 0.000 Intergenic Intergenic 30851 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr7-584 chr7 128728638 128728848 + 24.6 0.000 intron (NR_104242, intron 6 of 7) MER102b|DNA|hAT-Charlie -10616 NM_001199672 813 Hs.7753 NM_001219 ENSG00000128595 CALU - calumenin protein-coding chr16-256 chr16 2520283 2520493 + 24.6 0.000 promoter-TSS (NM_001330449) promoter-TSS (NM_001330449) 17 NM_015944 51005 Hs.740430 NM_015944 ENSG00000162066 AMDHD2 CGI-14 amidohydrolase domain containing 2 protein-coding chr14-252 chr14 39432244 39432454 + 24.6 0.000 5' UTR (NM_203301, exon 1 of 4) 5' UTR (NM_203301, exon 1 of 4) 151 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr9-712 chr9 132027107 132027317 + 24.6 0.000 intron (NM_001253881, intron 2 of 6) intron (NM_001253881, intron 2 of 6) 52655 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr3-404 chr3 126267353 126267563 + 24.6 0.000 Intergenic CpG -86272 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr17-383 chr17 39754396 39754606 + 24.6 0.000 Intergenic CpG 14534 NM_001242443 2886 Hs.86859 NM_005310 ENSG00000141738 GRB7 - growth factor receptor bound protein 7 protein-coding chr14-198 chr14 64704156 64704366 + 24.6 0.000 promoter-TSS (NM_001308147) promoter-TSS (NM_001308147) -163 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr12-751 chr12 46946195 46946405 + 24.6 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -120303 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr19-706 chr19 58499320 58499530 + 24.6 0.000 intron (NM_012254, intron 7 of 9) CpG-15322 12567 NM_012254 10998 Hs.292177 NM_012254 ENSG00000083807 SLC27A5 ACSB|ACSVL6|BACS|BAL|FACVL3|FATP-5|FATP5|VLACSR|VLCS-H2|VLCSH2 solute carrier family 27 member 5 protein-coding chr16-723 chr16 66618645 66618855 + 24.6 0.000 3' UTR (NM_181521, exon 4 of 4) 3' UTR (NM_181521, exon 4 of 4) 14019 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr20-92 chr20 58389059 58389269 + 24.6 0.000 promoter-TSS (NM_004738) promoter-TSS (NM_004738) 45 NM_004738 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr4-471 chr4 98474714 98474924 + 24.6 0.000 intron (NM_005723, intron 7 of 7) AluJo|SINE|Alu 183792 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr16-379 chr16 67277358 67277568 + 24.6 0.000 promoter-TSS (NM_001129727) promoter-TSS (NM_001129727) -699 NM_001129727 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding chr10-751 chr10 68088762 68088972 + 24.6 0.000 Intergenic L1MB8|LINE|L1 -13584 NM_001278186 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr5-278 chr5 218090 218300 + 24.6 0.000 promoter-TSS (NM_004168) promoter-TSS (NM_004168) -28 NM_001294332 6389 Hs.440475 NM_004168 ENSG00000073578 SDHA CMD1GG|FP|PGL5|SDH1|SDH2|SDHF succinate dehydrogenase complex flavoprotein subunit A protein-coding chr7-631 chr7 96075518 96075728 + 24.6 0.000 intron (NM_004411, intron 14 of 16) intron (NM_004411, intron 14 of 16) 144133 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr4-436 chr4 187172434 187172644 + 24.6 0.000 Intergenic Intergenic -29447 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr15-229 chr15 40694854 40695064 + 24.6 0.000 promoter-TSS (NM_002875) promoter-TSS (NM_002875) 146 NR_040058 100505648 Hs.586876 NR_040058 ENSG00000245849 RAD51-AS1 TODRA RAD51 antisense RNA 1 ncRNA chr12-465 chr12 122774146 122774356 + 24.6 0.000 promoter-TSS (NM_201435) promoter-TSS (NM_201435) -321 NR_027918 84660 Hs.592008 NM_032573 ENSG00000130783 CCDC62 CT109|ERAP75|TSP-NY coiled-coil domain containing 62 protein-coding chr10-720 chr10 113329344 113329554 + 24.6 0.000 Intergenic Intergenic 200178 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr11-875 chr11 61923659 61923869 + 24.6 0.000 Intergenic Intergenic -3480 NM_001271686 5866 Hs.13759 NM_013401 ENSG00000167994 RAB3IL1 GRAB RAB3A interacting protein like 1 protein-coding chr3-489 chr3 183635529 183635739 + 24.6 0.000 promoter-TSS (NR_146169) promoter-TSS (NR_146169) 11 NM_001349414 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding chr12-177 chr12 131830500 131830710 + 24.6 0.000 intron (NM_016155, intron 1 of 9) CpG 2212 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr17-808 chr17 2593326 2593536 + 24.6 0.000 promoter-TSS (NM_000430) promoter-TSS (NM_000430) -223 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr16-371 chr16 87860661 87860871 + 24.6 0.000 intron (NM_003486, intron 1 of 9) CpG 6870 NR_162122 113218509 NR_162122 MIR11401 - microRNA 11401 ncRNA chr3-628 chr3 21730190 21730400 + 24.6 0.000 intron (NM_024697, intron 1 of 7) intron (NM_024697, intron 1 of 7) 20915 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr20-328 chr20 36848329 36848539 + 24.6 0.000 intron (NM_080627, intron 1 of 14) intron (NM_080627, intron 1 of 14) 11439 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr8-134 chr8 28494187 28494397 + 24.6 0.000 promoter-TSS (NM_145866) promoter-TSS (NM_145866) 80 NM_017412 7976 Hs.40735 NM_017412 ENSG00000104290 FZD3 Fz-3 frizzled class receptor 3 protein-coding chr2-567 chr2 128260769 128260979 + 24.6 0.000 Intergenic Intergenic 57994 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr6-342 chr6 34324907 34325117 + 24.6 0.000 intron (NM_001202470, intron 6 of 8) intron (NM_001202470, intron 6 of 8) 67657 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr1-632 chr1 87328324 87328534 + 24.6 0.000 promoter-TSS (NM_006769) promoter-TSS (NM_006769) -451 NM_006769 8543 Hs.436792 NM_006769 ENSG00000143013 LMO4 - LIM domain only 4 protein-coding chr9-314 chr9 15552992 15553202 + 24.6 0.000 promoter-TSS (NM_173550) promoter-TSS (NM_173550) 54 NM_001348002 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr9-223 chr9 137618809 137619019 + 24.6 0.000 promoter-TSS (NM_024757) promoter-TSS (NM_024757) -19 NR_122035 85026 Hs.522520 NM_032937 ENSG00000203993 ARRDC1-AS1 C9orf37 ARRDC1 antisense RNA 1 ncRNA chr11-1147 chr11 122690904 122691114 + 24.6 0.000 intron (NM_001363365, intron 1 of 13) MIR3|SINE|MIR 35287 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr2-985 chr2 113010203 113010413 + 24.6 0.000 Intergenic Intergenic 4849 NM_014440 27179 Hs.278910 NM_014440 ENSG00000136694 IL36A FIL1|FIL1(EPSILON)|FIL1E|IL-1F6|IL1(EPSILON)|IL1F6 interleukin 36 alpha protein-coding chr12-511 chr12 79634948 79635158 + 24.6 0.000 intron (NM_001354732, intron 2 of 6) L2|LINE|L2 55527 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr17-487 chr17 81295308 81295518 + 24.6 0.000 promoter-TSS (NM_138570) promoter-TSS (NM_138570) -106 NM_001037984 124565 Hs.352240 NM_138570 ENSG00000157637 SLC38A10 PP1744 solute carrier family 38 member 10 protein-coding chr2-476 chr2 10057468 10057678 + 24.6 0.000 3' UTR (NM_001037160, exon 3 of 3) 3' UTR (NM_001037160, exon 3 of 3) 13328 NM_001177718 8462 Hs.12229 NM_003597 ENSG00000172059 KLF11 FKLF|FKLF1|MODY7|TIEG2|Tieg3 Kruppel like factor 11 protein-coding chr2-1253 chr2 11342676 11342886 + 24.6 0.000 intron (NM_001321643, intron 1 of 32) intron (NM_001321643, intron 1 of 32) 1855 NM_004850 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr18-194 chr18 58205589 58205799 + 24.6 0.000 intron (NM_001144970, intron 1 of 28) intron (NM_001144970, intron 1 of 28) 10289 NM_001144970 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr5-638 chr5 37464700 37464910 + 24.6 0.000 intron (NM_001345998, intron 7 of 17) LTR41|LTR|ERVL 85487 NM_001345999 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr1-359 chr1 225924224 225924434 + 24.6 0.000 promoter-TSS (NM_013328) promoter-TSS (NM_013328) 11 NM_001271681 29920 Hs.654718 NM_013328 ENSG00000143811 PYCR2 HLD10|P5CR2 pyrroline-5-carboxylate reductase 2 protein-coding chr1-593 chr1 193059266 193059476 + 24.6 0.000 promoter-TSS (NM_001350851) promoter-TSS (NM_001350851) -11 NM_001199262 51377 Hs.145469 NM_015984 ENSG00000116750 UCHL5 CGI-70|INO80R|UCH-L5|UCH37 ubiquitin C-terminal hydrolase L5 protein-coding chr14-222 chr14 65411679 65411889 + 24.6 0.000 promoter-TSS (NR_038170) promoter-TSS (NR_038170) 833 NR_024334 645431 Hs.713717 NR_024334 FUT8-AS1 - FUT8 antisense RNA 1 ncRNA chr9-629 chr9 37200677 37200887 + 24.6 0.000 intron (NM_001289120, intron 2 of 8) intron (NM_001289120, intron 2 of 8) 80184 NM_001289121 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr17-464 chr17 81636884 81637094 + 24.6 0.000 promoter-TSS (NM_001290212) promoter-TSS (NM_001290212) 123 NM_017921 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr7-132 chr7 76998298 76998508 + 24.6 0.000 intron (NR_023383, intron 2 of 10) (GT)n|Simple_repeat|Simple_repeat 17581 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr17-551 chr17 80263400 80263610 + 24.6 0.000 intron (NM_020954, intron 1 of 16) intron (NM_020954, intron 1 of 16) 2653 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr10-261 chr10 73252501 73252711 + 24.6 0.000 promoter-TSS (NR_134459) promoter-TSS (NR_134459) 38 NM_016065 51021 Hs.180312 NM_016065 ENSG00000182180 MRPS16 CGI-132|COXPD2|MRP-S16|RPMS16 mitochondrial ribosomal protein S16 protein-coding chr1-626 chr1 16644490 16644700 + 24.6 0.000 promoter-TSS (NR_027504) promoter-TSS (NR_027504) -979 NR_027504 11209 Hs.349110 NR_027504 MST1P2 MSPL-1|MSPL-2|MSPL-3|MSPL1|MSPL2|MSPL3|MSTP1|MSTP2|MSTP3 macrophage stimulating 1 pseudogene 2 pseudo chr11-1045 chr11 10298486 10298696 + 24.6 0.000 Intergenic Intergenic -4384 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr22-160 chr22 32474634 32474844 + 24.6 0.000 promoter-TSS (NM_012179) promoter-TSS (NM_012179) -72 NM_012179 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr1-1003 chr1 44881281 44881491 + 24.6 0.000 intron (NM_001166588, intron 7 of 9) intron (NM_001166588, intron 7 of 9) -38133 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr1-1678 chr1 64223302 64223512 + 24.6 0.000 intron (NR_158769, intron 6 of 8) intron (NR_158769, intron 6 of 8) 19784 NM_001366234 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding chr19-481 chr19 7294275 7294485 + 24.6 0.000 promoter-TSS (NM_000208) promoter-TSS (NM_000208) 34 NM_000208 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr3-651 chr3 36944069 36944279 + 24.6 0.000 intron (NM_001329998, intron 1 of 23) CpG 880 NM_001329998 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding chr16-836 chr16 86387545 86387755 + 24.6 0.000 Intergenic Intergenic -41971 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr14-396 chr14 71415365 71415575 + 24.6 0.000 intron (NM_001354286, intron 3 of 24) intron (NM_001354286, intron 3 of 24) 17133 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA chr1-1537 chr1 201191656 201191866 + 24.6 0.000 intron (NM_001164586, intron 1 of 23) intron (NM_001164586, intron 1 of 23) 936 NM_001164586 91156 Hs.519024 NM_178275 ENSG00000163395 IGFN1 EEF1A2BP1 immunoglobulin like and fibronectin type III domain containing 1 protein-coding chr10-882 chr10 77415526 77415736 + 24.6 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 64759 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr15-301 chr15 91936466 91936676 + 24.6 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 82267 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr6-285 chr6 87472732 87472942 + 24.6 0.000 promoter-TSS (NM_006416) promoter-TSS (NM_006416) -88 NM_001168398 10559 Hs.423163 NM_006416 ENSG00000164414 SLC35A1 CDG2F|CMPST|CST|hCST solute carrier family 35 member A1 protein-coding chr7-610 chr7 47494537 47494747 + 24.6 0.000 intron (NM_022748, intron 3 of 30) intron (NM_022748, intron 3 of 30) -29839 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr1-1555 chr1 2271266 2271476 + 24.6 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 43052 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr16-323 chr16 660717 660927 + 24.6 0.000 intron (NM_145294, intron 28 of 40) intron (NM_145294, intron 28 of 40) -7261 NM_001352287 89941 Hs.513242 NM_138769 ENSG00000140983 RHOT2 ARHT2|C16orf39|MIRO-2|MIRO2|RASL ras homolog family member T2 protein-coding chr6-318 chr6 7590001 7590211 + 24.6 0.000 promoter-TSS (NM_152551) promoter-TSS (NM_152551) -92 NM_152551 154007 Hs.13366 NM_152551 ENSG00000168566 SNRNP48 C6orf151|dJ336K20B.1|dJ512B11.2 small nuclear ribonucleoprotein U11/U12 subunit 48 protein-coding chr6-447 chr6 36369600 36369810 + 24.6 0.000 intron (NM_001207038, intron 4 of 6) MIRb|SINE|MIR 17964 NM_016135 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr6-367 chr6 3324637 3324847 + 24.6 0.000 intron (NM_021945, intron 4 of 10) intron (NM_021945, intron 4 of 10) 65795 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr8-412 chr8 81539750 81539960 + 24.6 0.000 Intergenic Intergenic -8465 NR_144370 646486 Hs.586370 NM_001105281 ENSG00000197416 FABP12 - fatty acid binding protein 12 protein-coding chr16-218 chr16 728263 728473 + 24.6 0.000 exon (NM_001323636, exon 5 of 8) exon (NM_001323636, exon 5 of 8) 1262 NM_032304 84264 Hs.124015 NM_032304 ENSG00000103253 HAGHL - hydroxyacylglutathione hydrolase like protein-coding chr8-382 chr8 22227811 22228021 + 24.6 0.000 intron (NM_001363311, intron 3 of 6) MIRb|SINE|MIR 4183 NM_014759 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr1-1037 chr1 19110388 19110598 + 24.5 0.000 intron (NM_020765, intron 79 of 105) intron (NM_020765, intron 79 of 105) 99773 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr16-290 chr16 2035640 2035850 + 24.5 0.000 intron (NM_001252073, intron 1 of 5) intron (NM_001252073, intron 1 of 5) 2451 NM_001252076 9351 Hs.440896 NM_004785 ENSG00000065054 SLC9A3R2 E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1 SLC9A3 regulator 2 protein-coding chr9-382 chr9 129334463 129334673 + 24.5 0.000 Intergenic Intergenic -2355 NR_120686 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr15-233 chr15 70763602 70763812 + 24.5 0.000 promoter-TSS (NM_018003) promoter-TSS (NM_018003) -149 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr22-151 chr22 46007969 46008179 + 24.5 0.000 non-coding (NR_027240, exon 1 of 1) non-coding (NR_027240, exon 1 of 1) 1458 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo chr1-863 chr1 145751816 145752026 + 24.5 0.000 intron (NM_014455, intron 5 of 8) intron (NM_014455, intron 5 of 8) 32422 NR_103845 11126 Hs.488237 NM_007053 ENSG00000117281 CD160 BY55|NK1|NK28 CD160 molecule protein-coding chr2-377 chr2 166375997 166376207 + 24.5 0.000 promoter-TSS (NM_002977) promoter-TSS (NM_002977) -115 NM_002977 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr16-610 chr16 83513136 83513346 + 24.5 0.000 intron (NM_001220489, intron 6 of 12) intron (NM_001220489, intron 6 of 12) 4895 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr1-1082 chr1 25892440 25892650 + 24.5 0.000 intron (NM_001145454, intron 4 of 4) MIR3|SINE|MIR 13608 NM_203401 3925 Hs.209983 NM_005563 ENSG00000117632 STMN1 C1orf215|LAP18|Lag|OP18|PP17|PP19|PR22|SMN stathmin 1 protein-coding chr11-883 chr11 94185518 94185728 + 24.5 0.000 Intergenic Intergenic 56782 NM_015368 24145 Hs.591976 NM_015368 ENSG00000110218 PANX1 MRS1|PX1|UNQ2529 pannexin 1 protein-coding chr19-1104 chr19 2287617 2287827 + 24.5 0.000 Intergenic Intergenic -5547 NM_198532 374872 Hs.511803 NM_198532 ENSG00000188305 PEAK3 C19orf35 PEAK family member 3 protein-coding chr18-244 chr18 55790395 55790605 + 24.5 0.000 Intergenic Intergenic -8775 NR_145452 100132501 Hs.634003 NR_145452 LINC01415 TCONS_00026208 long intergenic non-protein coding RNA 1415 ncRNA chr2-870 chr2 234633079 234633289 + 24.5 0.000 Intergenic Intergenic -49484 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr7-482 chr7 67025518 67025728 + 24.5 0.000 intron (NR_134540, intron 7 of 14) intron (NR_134540, intron 7 of 14) 28790 NM_018264 55253 Hs.520917 NM_018264 ENSG00000198874 TYW1 RSAFD1|TYW1A|YPL207W tRNA-yW synthesizing protein 1 homolog protein-coding chr15-449 chr15 84955445 84955655 + 24.5 0.000 intron (NM_001321722, intron 18 of 18) intron (NM_001321722, intron 18 of 18) -24917 NM_001243137 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr12-209 chr12 76084765 76084975 + 24.5 0.000 promoter-TSS (NM_004537) promoter-TSS (NM_004537) -185 NM_001330231 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr16-528 chr16 58614167 58614377 + 24.5 0.000 intron (NM_206999, intron 1 of 30) MER68|LTR|ERVL 15554 NR_049763 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr12-270 chr12 52010338 52010548 + 24.5 0.000 promoter-TSS (NM_001271856) promoter-TSS (NM_001271856) -49 NM_001271856 160622 Hs.407202 NM_181711 ENSG00000161835 GRASP TAMALIN general receptor for phosphoinositides 1 associated scaffold protein protein-coding chr14-126 chr14 39103166 39103376 + 24.5 0.000 promoter-TSS (NM_006364) promoter-TSS (NM_006364) -36 NM_006364 10484 Hs.272927 NM_006364 ENSG00000100934 SEC23A CLSD|hSec23A Sec23 homolog A, coat complex II component protein-coding chr2-1197 chr2 149715341 149715551 + 24.5 0.000 intron (NR_110240, intron 1 of 2) MLT1D|LTR|ERVL-MaLR -127671 NM_015702 27249 Hs.5324 NM_015702 ENSG00000168288 MMADHC C2orf25|CL25022|cblD metabolism of cobalamin associated D protein-coding chr9-384 chr9 132770089 132770299 + 24.5 0.000 intron (NM_001317959, intron 13 of 14) CpG 99730 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr2-538 chr2 235469021 235469231 + 24.5 0.000 Intergenic Intergenic -24917 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr6-293 chr6 134551482 134551692 + 24.5 0.000 Intergenic L1MCa|LINE|L1 -11582 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr1-278 chr1 46616795 46617005 + 24.5 0.000 promoter-TSS (NM_201403) promoter-TSS (NM_201403) -9 NM_201403 148932 Hs.632401 NM_145279 ENSG00000142961 MOB3C MOB1E|MOBKL2C MOB kinase activator 3C protein-coding chr11-1483 chr11 121630169 121630379 + 24.5 0.000 3' UTR (NM_003105, exon 48 of 48) 3' UTR (NM_003105, exon 48 of 48) 177960 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr12-666 chr12 121277026 121277236 + 24.5 0.000 intron (NM_172215, intron 1 of 15) intron (NM_172215, intron 1 of 15) -2546 NM_001270486 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr14-414 chr14 36718351 36718561 + 24.5 0.000 intron (NM_001171170, intron 6 of 10) intron (NM_001171170, intron 6 of 10) 60888 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr13-81 chr13 30870552 30870762 + 24.5 0.000 Intergenic Intergenic -11905 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr6-223 chr6 43492369 43492579 + 24.5 0.000 intron (NM_001350567, intron 2 of 10) intron (NM_001350567, intron 2 of 10) 2716 NM_001350566 93643 Hs.520145 NM_080604 ENSG00000137221 TJAP1 PILT|TJP4 tight junction associated protein 1 protein-coding chr5-844 chr5 68924509 68924719 + 24.5 0.000 Intergenic Intergenic 105313 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr11-464 chr11 57761690 57761900 + 24.5 0.000 promoter-TSS (NM_001206885) promoter-TSS (NM_001206885) -7 NM_001085464 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr17-750 chr17 57903260 57903470 + 24.5 0.000 promoter-TSS (NM_001292025) promoter-TSS (NM_001292025) 24 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr14-694 chr14 20683277 20683487 + 24.5 0.000 promoter-TSS (NM_001145) promoter-TSS (NM_001145) -795 NM_001145 283 Hs.283749 NM_001145 ENSG00000214274 ANG ALS9|HEL168|RAA1|RNASE4|RNASE5 angiogenin protein-coding chr1-947 chr1 32205451 32205661 + 24.5 0.000 promoter-TSS (NM_001160042) promoter-TSS (NM_001160042) -115 NM_001160042 55721 Hs.274356 NM_018134 ENSG00000160051 IQCC - IQ motif containing C protein-coding chr7-439 chr7 157271963 157272173 + 24.5 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -64936 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr11-599 chr11 12433814 12434024 + 24.5 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 56348 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr8-347 chr8 23304002 23304212 + 24.5 0.000 intron (NM_002318, intron 10 of 13) intron (NM_002318, intron 10 of 13) 15999 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr2-364 chr2 119759625 119759835 + 24.5 0.000 promoter-TSS (NM_002830) promoter-TSS (NM_002830) -192 NM_002830 5775 Hs.469809 NM_002830 ENSG00000088179 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase non-receptor type 4 protein-coding chr12-278 chr12 130776094 130776304 + 24.5 0.000 Intergenic Intergenic -59894 NM_001351233 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding chr3-1656 chr3 159191597 159191807 + 24.5 0.000 intron (NM_001197113, intron 1 of 10) intron (NM_001197113, intron 1 of 10) -81545 NM_001197107 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr19-1019 chr19 44071851 44072061 + 24.5 0.000 promoter-TSS (NM_001037813) promoter-TSS (NM_001037813) -203 NM_001037813 342909 Hs.445395 NM_001037813 ENSG00000186026 ZNF284 ZNF284L zinc finger protein 284 protein-coding chr2-1032 chr2 33366555 33366765 + 24.5 0.000 intron (NM_206943, intron 31 of 33) MIRb|SINE|MIR -51856 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr2-905 chr2 164388499 164388709 + 24.5 0.000 Intergenic Intergenic 179891 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr7-1215 chr7 90383948 90384158 + 24.5 0.000 intron (NM_001042717, intron 7 of 7) intron (NM_001042717, intron 7 of 7) -12239 NR_102424 101409256 NR_102424 LOC101409256 - cell division cycle 42 pseudogene pseudo chr1-460 chr1 24683806 24684016 + 24.5 0.000 Intergenic LTR23|LTR|ERV1 40332 NM_001366597 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr12-168 chr12 48814546 48814756 + 24.5 0.000 promoter-TSS (NM_001206916) promoter-TSS (NM_001206916) 171 NM_001206917 784 Hs.250712 NM_000725 ENSG00000167535 CACNB3 CAB3|CACNLB3 calcium voltage-gated channel auxiliary subunit beta 3 protein-coding chr11-791 chr11 61834653 61834863 + 24.5 0.000 intron (NM_004265, intron 1 of 11) intron (NM_004265, intron 1 of 11) 6458 NM_004265 9415 Hs.502745 NM_004265 ENSG00000134824 FADS2 D6D|DES6|FADSD6|LLCDL2|SLL0262|TU13 fatty acid desaturase 2 protein-coding chr5-476 chr5 150317170 150317380 + 24.5 0.000 Intergenic Intergenic -14370 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr3-186 chr3 132722824 132723034 + 24.5 0.000 promoter-TSS (NM_153240) promoter-TSS (NM_153240) -470 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr7-513 chr7 87219669 87219879 + 24.5 0.000 promoter-TSS (NM_024315) promoter-TSS (NM_024315) -42 NM_024315 79161 Hs.619593 NM_024315 ENSG00000135185 TMEM243 C7orf23|MM-TRAG|MMTRAG transmembrane protein 243 protein-coding chr17-570 chr17 29639493 29639703 + 24.5 0.000 intron (NM_033389, intron 13 of 14) intron (NM_033389, intron 13 of 14) -18175 NM_032854 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chr1-646 chr1 19163351 19163561 + 24.5 0.000 intron (NM_020765, intron 34 of 105) intron (NM_020765, intron 34 of 105) 46810 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr2-504 chr2 200811582 200811792 + 24.5 0.000 promoter-TSS (NM_001321693) promoter-TSS (NM_001321693) 98 NM_001321690 9689 Hs.355983 NM_014670 ENSG00000082153 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding chr1-786 chr1 36109197 36109407 + 24.5 0.000 intron (NM_005202, intron 2 of 3) intron (NM_005202, intron 2 of 3) 15920 NM_005202 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr19-1359 chr19 53183201 53183411 + 24.5 0.000 intron (NM_001353458, intron 1 of 4) intron (NM_001353458, intron 1 of 4) 10052 NM_001353459 79788 Hs.745230 NM_024733 ENSG00000197497 ZNF665 ZFP160L zinc finger protein 665 protein-coding chr2-891 chr2 85248816 85249026 + 24.5 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) 35269 NR_136323 102724579 Hs.669216 NR_136323 LOC102724579 - uncharacterized LOC102724579 ncRNA chr14-357 chr14 49405402 49405612 + 24.5 0.000 Intergenic Charlie2a|DNA|hAT-Charlie 180873 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr14-444 chr14 54420525 54420735 + 24.5 0.000 TTS (NM_001130851) TTS (NM_001130851) 20744 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding chr7-264 chr7 66592188 66592398 + 24.5 0.000 non-coding (NR_111973, exon 1 of 11) non-coding (NR_111973, exon 1 of 11) 114 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr16-521 chr16 81401084 81401294 + 24.5 0.000 Intergenic Intergenic 16171 NR_039871 100616150 NR_039871 ENSG00000284473 MIR4720 - microRNA 4720 ncRNA chr9-221 chr9 136944659 136944869 + 24.5 0.000 promoter-TSS (NM_000606) promoter-TSS (NM_000606) -26 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr1-1307 chr1 51661192 51661402 + 24.5 0.000 intron (NM_001350209, intron 2 of 23) intron (NM_001350209, intron 2 of 23) 44205 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr15-340 chr15 69044968 69045178 + 24.5 0.000 intron (NM_024505, intron 10 of 15) intron (NM_024505, intron 10 of 15) 30378 NM_001184779 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr5-634 chr5 173880710 173880920 + 24.5 0.000 Intergenic Intergenic -7534 NM_030627 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr4-305 chr4 101191767 101191977 + 24.5 0.000 intron (NM_001130691, intron 2 of 12) intron (NM_001130691, intron 2 of 12) 49000 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr7-589 chr7 1096437 1096647 + 24.5 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) 8429 NM_001098201 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr19-843 chr19 42121743 42121953 + 24.5 0.000 intron (NM_001207026, intron 4 of 12) intron (NM_001207026, intron 4 of 12) 10598 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr17-734 chr17 68235019 68235229 + 24.5 0.000 intron (NM_001346472, intron 2 of 7) intron (NM_001346472, intron 2 of 7) -12450 NM_001346474 51321 Hs.293560 NM_016627 ENSG00000196704 AMZ2 - archaelysin family metallopeptidase 2 protein-coding chr9-500 chr9 131433091 131433301 + 24.5 0.000 intron (NM_013318, intron 2 of 30) intron (NM_013318, intron 2 of 30) 3106 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr17-764 chr17 17841726 17841936 + 24.5 0.000 Intergenic Intergenic -4820 NM_004176 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr15-261 chr15 78065462 78065672 + 24.5 0.000 intron (NM_144572, intron 1 of 12) intron (NM_144572, intron 1 of 12) 12085 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr7-569 chr7 22193650 22193860 + 24.5 0.000 promoter-TSS (NM_001367600) promoter-TSS (NM_001367600) -10 NM_001367603 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr6-256 chr6 57268060 57268270 + 24.5 0.000 Intergenic Intergenic -4819 NR_109774 100506188 Hs.485640 NR_109774 LOC100506188 - uncharacterized LOC100506188 ncRNA chr3-368 chr3 57756153 57756363 + 24.5 0.000 promoter-TSS (NM_001304421) promoter-TSS (NM_001304421) -998 NM_001304420 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chrX-79 chrX 64205984 64206194 + 24.5 0.000 promoter-TSS (NM_152424) promoter-TSS (NM_152424) -381 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding chr9-517 chr9 120441828 120442038 + 24.5 0.000 intron (NR_073558, intron 23 of 37) intron (NR_073558, intron 23 of 37) 138234 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr22-244 chr22 29267883 29268093 + 24.5 0.000 promoter-TSS (NM_001163287) promoter-TSS (NM_001163287) -7 NM_012265 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr18-232 chr18 23862183 23862393 + 24.5 0.000 intron (NM_001127717, intron 35 of 73) intron (NM_001127717, intron 35 of 73) -10732 NM_001127718 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr4-428 chr4 76090386 76090596 + 24.5 0.000 intron (NM_001130017, intron 3 of 9) intron (NM_001130017, intron 3 of 9) 15796 NM_001179 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr15-452 chr15 92069622 92069832 + 24.5 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 215423 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr1-1372 chr1 46288528 46288738 + 24.5 0.000 intron (NM_006369, intron 3 of 9) intron (NM_006369, intron 3 of 9) 14733 NM_006369 10489 Hs.144941 NM_006369 ENSG00000132128 LRRC41 MUF1|PP7759 leucine rich repeat containing 41 protein-coding chr7-538 chr7 85160396 85160606 + 24.5 0.000 Intergenic Intergenic -38570 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr16-1001 chr16 48687517 48687727 + 24.5 0.000 Intergenic Intergenic -77442 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr19-477 chr19 55487412 55487622 + 24.5 0.000 promoter-TSS (NM_001195267) promoter-TSS (NM_001195267) -919 NM_001195267 284297 Hs.554182 NM_182571 ENSG00000179954 SSC5D S5D-SRCRB scavenger receptor cysteine rich family member with 5 domains protein-coding chr2-959 chr2 152396234 152396444 + 24.5 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 61165 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr12-354 chr12 1458037 1458247 + 24.5 0.000 intron (NR_027948, intron 19 of 19) intron (NR_027948, intron 19 of 19) -42349 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr5-868 chr5 159849754 159849964 + 24.5 0.000 intron (NR_109891, intron 2 of 2) intron (NR_109891, intron 2 of 2) 21525 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr11-509 chr11 126547244 126547454 + 24.5 0.000 intron (NM_001301097, intron 2 of 15) MER103C|DNA|hAT-Charlie -105429 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr11-848 chr11 766239 766449 + 24.5 0.000 TTS (NM_001318821) TTS (NM_001318821) 11143 NM_001318824 347862 Hs.218362 NM_182612 ENSG00000177225 GATD1 PDDC1 glutamine amidotransferase like class 1 domain containing 1 protein-coding chr6-993 chr6 4582168 4582378 + 24.4 0.000 Intergenic Intergenic -28292 NR_122107 497048 Hs.591355 NM_001011540 ENSG00000205444 KU-MEL-3 - uncharacterized LOC497048 ncRNA chr1-901 chr1 211592180 211592390 + 24.4 0.000 Intergenic Intergenic -13124 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr4-633 chr4 30975254 30975464 + 24.4 0.000 intron (NM_001173523, intron 2 of 2) intron (NM_001173523, intron 2 of 2) -195785 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA chr2-284 chr2 37925301 37925511 + 24.4 0.000 promoter-TSS (NM_001322211) promoter-TSS (NM_001322211) 119 NM_001322212 151393 Hs.591566 NM_144713 ENSG00000115841 RMDN2 BLOCK18|FAM82A|FAM82A1|PRO34163|PYST9371|RMD-2|RMD2|RMD4 regulator of microtubule dynamics 2 protein-coding chr1-423 chr1 216601147 216601357 + 24.4 0.000 intron (NM_001243505, intron 3 of 6) CpG 122177 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr6-872 chr6 54624919 54625129 + 24.4 0.000 Intergenic Intergenic -221747 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chrX-153 chrX 19846951 19847161 + 24.4 0.000 intron (NM_031892, intron 1 of 17) intron (NM_031892, intron 1 of 17) -13905 NM_001353893 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr14-239 chr14 100221597 100221807 + 24.4 0.000 Intergenic Intergenic -17442 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr16-501 chr16 3264513 3264723 + 24.4 0.000 non-coding (NR_033904, exon 1 of 2) non-coding (NR_033904, exon 1 of 2) 850 NR_033904 283876 Hs.592092 NR_033904 ENSG00000281005 LINC00921 - long intergenic non-protein coding RNA 921 ncRNA chr3-800 chr3 194593480 194593690 + 24.4 0.000 intron (NM_138399, intron 9 of 10) intron (NM_138399, intron 9 of 10) 9317 NR_047574 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr3-898 chr3 81444032 81444242 + 24.4 0.000 Intergenic Intergenic 317508 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr6-340 chr6 143843121 143843331 + 24.4 0.000 promoter-TSS (NM_032860) promoter-TSS (NM_032860) -47 NM_001329953 84946 Hs.185675 NM_032860 ENSG00000135521 LTV1 C6orf93|dJ468K18.4 LTV1 ribosome biogenesis factor protein-coding chr7-184 chr7 2314320 2314530 + 24.4 0.000 promoter-TSS (NM_013321) promoter-TSS (NM_013321) 16 NM_013321 29886 Hs.584900 NM_013321 ENSG00000106266 SNX8 Mvp1 sorting nexin 8 protein-coding chr12-176 chr12 107761113 107761323 + 24.4 0.000 promoter-TSS (NM_012406) promoter-TSS (NM_012406) -81 NM_012406 11108 Hs.506655 NM_012406 ENSG00000110851 PRDM4 PFM1 PR/SET domain 4 protein-coding chr5-380 chr5 154850507 154850717 + 24.4 0.000 promoter-TSS (NM_032385) promoter-TSS (NM_032385) -9 NM_032385 10826 Hs.519694 NM_016348 ENSG00000170271 FAXDC2 C5orf4 fatty acid hydroxylase domain containing 2 protein-coding chr16-651 chr16 83554192 83554402 + 24.4 0.000 intron (NM_001220489, intron 6 of 12) intron (NM_001220489, intron 6 of 12) 45951 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr7-697 chr7 74441909 74442119 + 24.4 0.000 Intergenic Intergenic -11892 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr17-384 chr17 50478861 50479071 + 24.4 0.000 exon (NM_018346, exon 1 of 9) exon (NM_018346, exon 1 of 9) 106 NM_018346 55316 Hs.8033 NM_018346 ENSG00000136444 RSAD1 HemW radical S-adenosyl methionine domain containing 1 protein-coding chr15-118 chr15 41231123 41231333 + 24.4 0.000 promoter-TSS (NM_007236) promoter-TSS (NM_007236) -40 NM_007236 11261 Hs.406234 NM_007236 ENSG00000187446 CHP1 CHP|SLC9A1BP|SPAX9|Sid470p|p22|p24 calcineurin like EF-hand protein 1 protein-coding chr16-403 chr16 67247278 67247488 + 24.4 0.000 promoter-TSS (NM_001318202) promoter-TSS (NM_001318202) 98 NM_013241 29109 Hs.95231 NM_013241 ENSG00000135723 FHOD1 FHOS formin homology 2 domain containing 1 protein-coding chrX-56 chrX 17737151 17737361 + 24.4 0.000 promoter-TSS (NM_001037536) promoter-TSS (NM_001037536) -193 NM_001037535 6322 Hs.109655 NM_006746 ENSG00000047634 SCML1 - Scm polycomb group protein like 1 protein-coding chr12-506 chr12 56221999 56222209 + 24.4 0.000 promoter-TSS (NR_040053) promoter-TSS (NR_040053) -135 NM_194359 10193 Hs.524502 NM_005785 ENSG00000181852 RNF41 FLRF|NRDP1|SBBI03 ring finger protein 41 protein-coding chr11-593 chr11 75499345 75499555 + 24.4 0.000 intron (NM_030792, intron 1 of 16) Tigger19b|DNA|TcMar-Tigger 26123 NM_001351168 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr10-621 chr10 125823317 125823527 + 24.4 0.000 promoter-TSS (NR_136675) promoter-TSS (NR_136675) -124 NM_078468 56647 Hs.370292 NM_016567 ENSG00000107949 BCCIP TOK-1|TOK1 BRCA2 and CDKN1A interacting protein protein-coding chr9-645 chr9 36194839 36195049 + 24.4 0.000 intron (NM_001311204, intron 1 of 4) intron (NM_001311204, intron 1 of 4) 4023 NM_001076677 1211 Hs.522114 NM_001833 ENSG00000122705 CLTA LCA clathrin light chain A protein-coding chr16-341 chr16 85126859 85127069 + 24.4 0.000 Intergenic Intergenic -10186 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr10-316 chr10 70233270 70233480 + 24.4 0.000 promoter-TSS (NM_021129) promoter-TSS (NM_021129) 54 NM_021129 5464 Hs.437403 NM_021129 ENSG00000180817 PPA1 HEL-S-66p|IOPPP|PP|PP1|SID6-8061 pyrophosphatase (inorganic) 1 protein-coding chrX-231 chrX 33211559 33211769 + 24.4 0.000 promoter-TSS (NM_004006) promoter-TSS (NM_004006) -108 NM_004006 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr17-631 chr17 60526066 60526276 + 24.4 0.000 promoter-TSS (NM_001282476) promoter-TSS (NM_001282476) 69 NM_001282476 10513 Hs.84084 NM_006380 ENSG00000062725 APPBP2 APP-BP2|HS.84084|PAT1 amyloid beta precursor protein binding protein 2 protein-coding chr6-529 chr6 34543572 34543782 + 24.4 0.000 intron (NM_012391, intron 2 of 5) L2a|LINE|L2 12652 NM_012391 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr12-771 chr12 113831152 113831362 + 24.4 0.000 intron (NM_001146698, intron 23 of 24) intron (NM_001146698, intron 23 of 24) -57574 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr19-687 chr19 2061634 2061844 + 24.4 0.000 Intergenic CpG -10495 NM_199054 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr5-913 chr5 96657226 96657436 + 24.4 0.000 Intergenic Intergenic -4706 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr15-197 chr15 45163058 45163268 + 24.4 0.000 intron (NM_175940, intron 31 of 33) intron (NM_175940, intron 31 of 33) 18044 NM_001301171 90525 Hs.310399 NM_138356 ENSG00000138606 SHF - Src homology 2 domain containing F protein-coding chr1-1534 chr1 158003209 158003419 + 24.4 0.000 intron (NM_001286349, intron 1 of 12) intron (NM_001286349, intron 1 of 12) 9669 NM_018240 55243 Hs.272234 NM_018240 ENSG00000183853 KIRREL1 KIRREL|NEPH1 kirre like nephrin family adhesion molecule 1 protein-coding chr1-1542 chr1 227805814 227806024 + 24.4 0.000 Intergenic L1MEg|LINE|L1 -9798 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr8-240 chr8 125700697 125700907 + 24.4 0.000 Intergenic Intergenic 250395 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr8-187 chr8 63039318 63039528 + 24.4 0.000 promoter-TSS (NM_003878) promoter-TSS (NM_003878) -617 NM_003878 8836 Hs.78619 NM_003878 ENSG00000137563 GGH GH gamma-glutamyl hydrolase protein-coding chr7-319 chr7 5045931 5046141 + 24.4 0.000 5' UTR (NM_021163, exon 1 of 5) 5' UTR (NM_021163, exon 1 of 5) 176 NM_021163 57786 Hs.396178 NM_021163 ENSG00000146587 RBAK ZNF769 RB associated KRAB zinc finger protein-coding chr17-704 chr17 35242800 35243010 + 24.4 0.000 promoter-TSS (NM_001330183) promoter-TSS (NM_001330183) -167 NM_001330183 162394 Hs.585792 NM_144975 ENSG00000166750 SLFN5 - schlafen family member 5 protein-coding chr17-769 chr17 31788317 31788527 + 24.4 0.000 Intergenic Intergenic 70540 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chrX-218 chrX 17614218 17614428 + 24.4 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -21177 NM_001291868 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr12-576 chr12 95918506 95918716 + 24.4 0.000 intron (NM_182496, intron 3 of 15) MER104|DNA|TcMar-Tc2 24003 NM_182496 120935 Hs.210377 NM_182496 ENSG00000165972 CCDC38 - coiled-coil domain containing 38 protein-coding chr8-377 chr8 115115783 115115993 + 24.4 0.000 Intergenic Intergenic 552125 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr4-380 chr4 145735262 145735472 + 24.4 0.000 Intergenic Intergenic 55163 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr12-677 chr12 38898056 38898266 + 24.4 0.000 intron (NM_153634, intron 1 of 19) intron (NM_153634, intron 1 of 19) 7430 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr16-380 chr16 70703509 70703719 + 24.4 0.000 intron (NM_001351157, intron 13 of 17) intron (NM_001351157, intron 13 of 17) -17561 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr10-594 chr10 125037202 125037412 + 24.4 0.000 intron (NM_001290214, intron 3 of 10) intron (NM_001290214, intron 3 of 10) -4437 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr6-924 chr6 16376302 16376512 + 24.4 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 137820 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr2-808 chr2 138707469 138707679 + 24.4 0.000 intron (NM_007226, intron 1 of 1) L3|LINE|CR1 72816 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chr6-355 chr6 42338830 42339040 + 24.4 0.000 intron (NM_001297573, intron 3 of 17) intron (NM_001297573, intron 3 of 17) 113116 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr17-385 chr17 74213197 74213407 + 24.4 0.000 promoter-TSS (NM_032646) promoter-TSS (NM_032646) 19 NR_026914 85001 Hs.706954 NM_032915 ENSG00000246731 MGC16275 - uncharacterized protein MGC16275 ncRNA chr1-2318 chr1 109299131 109299341 + 24.4 0.000 intron (NM_001265613, intron 1 of 8) intron (NM_001265613, intron 1 of 8) 7775 NM_001265613 343263 Hs.443402 NM_001010985 ENSG00000221986 MYBPHL - myosin binding protein H like protein-coding chr18-92 chr18 54828516 54828726 + 24.4 0.000 5' UTR (NM_004163, exon 1 of 6) 5' UTR (NM_004163, exon 1 of 6) 144 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr8-418 chr8 143286551 143286761 + 24.4 0.000 Intergenic Intergenic -4761 NM_030895 79943 Hs.512740 NM_030895 ENSG00000185730 ZNF696 - zinc finger protein 696 protein-coding chr4-640 chr4 75573613 75573823 + 24.4 0.000 Intergenic Intergenic 17652 NR_046429 152816 Hs.24510 NM_178497 ENSG00000174792 ODAPH AI2A4|C4orf26 odontogenesis associated phosphoprotein protein-coding chr1-1123 chr1 74733125 74733335 + 24.4 0.000 promoter-TSS (NM_001162916) promoter-TSS (NM_001162916) 52 NR_027962 127253 Hs.348411 NM_138467 ENSG00000162623 TYW3 C1orf171 tRNA-yW synthesizing protein 3 homolog protein-coding chr5-477 chr5 160419091 160419301 + 24.4 0.000 promoter-TSS (NM_001364521) promoter-TSS (NM_001364521) -115 NM_001364521 10569 Hs.435342 NM_006425 ENSG00000164609 SLU7 9G8|hSlu7 SLU7 homolog, splicing factor protein-coding chr18-125 chr18 26429631 26429841 + 24.4 0.000 intron (NR_110762, intron 3 of 3) intron (NR_110762, intron 3 of 3) 6741 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr12-622 chr12 11483108 11483318 + 24.4 0.000 intron (NR_148969, intron 2 of 4) intron (NR_148969, intron 2 of 4) 3465 NR_148969 440084 Hs.121321 NR_148969 LOC440084 - uncharacterized LOC440084 ncRNA chr2-748 chr2 108640799 108641009 + 24.4 0.000 intron (NM_001193484, intron 1 of 9) L1MA5|LINE|L1 -14130 NM_001193485 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr20-99 chr20 4148597 4148807 + 24.4 0.000 promoter-TSS (NM_175839) promoter-TSS (NM_175839) -77 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr11-640 chr11 64230500 64230710 + 24.4 0.000 TTS (NM_032344) TTS (NM_032344) 173 NM_001307980 3338 Hs.172847 NM_005528 ENSG00000110011 DNAJC4 DANJC4|HSPF2|MCG18 DnaJ heat shock protein family (Hsp40) member C4 protein-coding chr12-341 chr12 7060507 7060717 + 24.4 0.000 promoter-TSS (NM_201442) promoter-TSS (NM_201442) -106 NM_001346850 716 Hs.458355 NM_001734 ENSG00000182326 C1S EDSPD2 complement C1s protein-coding chr4-379 chr4 141102415 141102625 + 24.4 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 30949 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr5-342 chr5 15533091 15533301 + 24.4 0.000 intron (NM_001278317, intron 1 of 3) intron (NM_001278317, intron 1 of 3) 31758 NM_001278317 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr14-279 chr14 49634251 49634461 + 24.3 0.000 exon (NM_018139, exon 1 of 3) exon (NM_018139, exon 1 of 3) 874 NM_018139 55172 Hs.231761 NM_018139 ENSG00000165506 DNAAF2 C14orf104|CILD10|KTU|PF13 dynein axonemal assembly factor 2 protein-coding chr12-553 chr12 4538641 4538851 + 24.3 0.000 promoter-TSS (NM_020374) promoter-TSS (NM_020374) -144 NM_006479 10635 Hs.730696 NM_006479 ENSG00000111247 RAD51AP1 PIR51 RAD51 associated protein 1 protein-coding chr20-265 chr20 24465925 24466135 + 24.3 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -3169 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr9-450 chr9 69898866 69899076 + 24.3 0.000 intron (NM_001010940, intron 5 of 5) L2|LINE|L2 78154 NM_001308086 138255 Hs.444459 NM_001010940 ENSG00000204711 C9orf135 - chromosome 9 open reading frame 135 protein-coding chr5-469 chr5 107743634 107743844 + 24.3 0.000 Intergenic Intergenic -72802 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr1-1188 chr1 35370417 35370627 + 24.3 0.000 exon (NM_001350138, exon 8 of 31) exon (NM_001350138, exon 8 of 31) -4445 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr7-767 chr7 30778602 30778812 + 24.3 0.000 intron (NR_037598, intron 4 of 19) intron (NR_037598, intron 4 of 19) 7290 NM_032222 84182 Hs.660192 NM_032222 ENSG00000106125 MINDY4 AQP-1|AQP1|C7orf67|CHIP28|FAM188B MINDY lysine 48 deubiquitinase 4 protein-coding chr3-376 chr3 125063075 125063285 + 24.3 0.000 Intergenic Intergenic -7183 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr11-753 chr11 111735692 111735902 + 24.3 0.000 intron (NM_181699, intron 15 of 15) intron (NM_181699, intron 15 of 15) 30592 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr22-515 chr22 24059241 24059451 + 24.3 0.000 exon (NM_001199281, exon 11 of 37) exon (NM_001199281, exon 11 of 37) 47976 NM_001199281 23523 Hs.517478 NM_012295 ENSG00000099991 CABIN1 CAIN|KB-318B8.7|PPP3IN calcineurin binding protein 1 protein-coding chr7-852 chr7 41996791 41997001 + 24.3 0.000 intron (NM_000168, intron 10 of 14) intron (NM_000168, intron 10 of 14) 240313 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr15-356 chr15 52392444 52392654 + 24.3 0.000 intron (NM_001142495, intron 11 of 39) intron (NM_001142495, intron 11 of 39) -96745 NM_018728 55930 Hs.487036 NM_018728 ENSG00000128833 MYO5C - myosin VC protein-coding chr1-382 chr1 20696701 20696911 + 24.3 0.000 intron (NM_001122819, intron 6 of 14) intron (NM_001122819, intron 6 of 14) 21201 NM_020816 57576 Hs.130411 NM_020816 ENSG00000117245 KIF17 KIF17B|KIF3X|KLP-2|OSM-3 kinesin family member 17 protein-coding chr17-866 chr17 76839754 76839964 + 24.3 0.000 Intergenic MER3|DNA|hAT-Charlie -16307 NR_135283 283994 Hs.645372 NR_135283 ENSG00000267535 LINC00868 C17orf52 long intergenic non-protein coding RNA 868 ncRNA chr3-407 chr3 156751414 156751624 + 24.3 0.000 intron (NR_038387, intron 1 of 2) intron (NR_038387, intron 1 of 2) 60502 NR_003284 647033 Hs.745109 NR_003284 PA2G4P4 PA2G4L1 proliferation-associated 2G4 pseudogene 4 pseudo chr1-1355 chr1 25503021 25503231 + 24.3 0.000 Intergenic Intergenic -40459 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr1-2025 chr1 155938209 155938419 + 24.3 0.000 Intergenic Intergenic -3375 NM_181885 339403 Hs.449914 NM_181885 ENSG00000173080 RXFP4 GPCR142|GPR100|RLN3R2|RXFPR4 relaxin family peptide/INSL5 receptor 4 protein-coding chr13-345 chr13 66546692 66546902 + 24.3 0.000 intron (NM_001318373, intron 3 of 3) Tigger3b|DNA|TcMar-Tigger -278372 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr11-1170 chr11 62004591 62004801 + 24.3 0.000 Intergenic Intergenic -37062 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr19-659 chr19 18480259 18480469 + 24.3 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 41706 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr5-732 chr5 151014962 151015172 + 24.3 0.000 Intergenic MER68|LTR|ERVL -5524 NM_001329790 2878 Hs.386793 NM_002084 ENSG00000211445 GPX3 GPx-P|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding chr12-643 chr12 6167910 6168120 + 24.3 0.000 Intergenic MIR|SINE|MIR -31931 NM_001330312 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr2-821 chr2 38690883 38691093 + 24.3 0.000 intron (NM_138801, intron 4 of 6) intron (NM_138801, intron 4 of 6) 24874 NM_138801 130589 Hs.435012 NM_138801 ENSG00000143891 GALM BLOCK25|GLAT|HEL-S-63p|IBD1 galactose mutarotase protein-coding chr19-831 chr19 6611035 6611245 + 24.3 0.000 Intergenic L1M4|LINE|L1 -19990 NM_001330332 970 Hs.501497 NM_001252 ENSG00000125726 CD70 CD27-L|CD27L|CD27LG|LPFS3|TNFSF7|TNLG8A CD70 molecule protein-coding chr12-311 chr12 124369601 124369811 + 24.3 0.000 intron (NM_001077261, intron 21 of 47) intron (NM_001077261, intron 21 of 47) -32464 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr16-453 chr16 80938012 80938222 + 24.3 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -45521 NR_131947 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA chr2-1126 chr2 1625461 1625671 + 24.3 0.000 Intergenic Intergenic 118949 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-770 chr2 43635034 43635244 + 24.3 0.000 Intergenic Intergenic -2121 NM_172069 130271 Hs.164162 NM_172069 ENSG00000152527 PLEKHH2 PLEKHH1L pleckstrin homology, MyTH4 and FERM domain containing H2 protein-coding chr6-878 chr6 74409494 74409704 + 24.3 0.000 intron (NR_110856, intron 2 of 3) intron (NR_110856, intron 2 of 3) 340148 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr2-505 chr2 204550766 204550976 + 24.3 0.000 intron (NM_205863, intron 1 of 21) intron (NM_205863, intron 1 of 21) 5396 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr11-375 chr11 8709163 8709373 + 24.3 0.000 intron (NM_005418, intron 14 of 22) intron (NM_005418, intron 14 of 22) 23829 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr11-581 chr11 707066 707276 + 24.3 0.000 promoter-TSS (NM_001367390) promoter-TSS (NM_001367390) -88 NM_001367390 10522 Hs.243994 NM_021008 ENSG00000177030 DEAF1 MRD24|NUDR|SPN|ZMYND5 DEAF1 transcription factor protein-coding chr14-157 chr14 92748589 92748799 + 24.3 0.000 promoter-TSS (NM_001008530) promoter-TSS (NM_001008530) -67 NM_001363699 5641 Hs.18069 NM_005606 ENSG00000100600 LGMN AEP|LGMN1|PRSC1 legumain protein-coding chr10-775 chr10 6186174 6186384 + 24.3 0.000 intron (NM_001282630, intron 1 of 14) intron (NM_001282630, intron 1 of 14) -16653 NM_004566 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr11-283 chr11 65663033 65663243 + 24.3 0.000 promoter-TSS (NM_001243985) promoter-TSS (NM_001243985) -166 NM_001243985 5970 Hs.502875 NM_021975 ENSG00000173039 RELA CMCU|NFKB3|p65 RELA proto-oncogene, NF-kB subunit protein-coding chr9-275 chr9 105244407 105244617 + 24.3 0.000 promoter-TSS (NM_001286730) promoter-TSS (NM_001286730) -93 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr11-657 chr11 2378890 2379100 + 24.3 0.000 intron (NM_004356, intron 1 of 7) intron (NM_004356, intron 1 of 7) -1003 NR_108080 101927682 Hs.675920 NR_108080 ENSG00000238184 CD81-AS1 - CD81 antisense RNA 1 ncRNA chr10-516 chr10 103231322 103231532 + 24.3 0.000 Intergenic Intergenic -14460 NM_001143909 729020 Hs.458437 NM_001143909 ENSG00000235376 RPEL1 - ribulose-5-phosphate-3-epimerase like 1 protein-coding chr4-1141 chr4 26687788 26687998 + 24.3 0.000 intron (NM_001292054, intron 9 of 17) intron (NM_001292054, intron 9 of 17) 103809 NM_018317 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr3-496 chr3 77825370 77825580 + 24.3 0.000 Intergenic L1PA16|LINE|L1 223488 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr11-571 chr11 67428185 67428395 + 24.3 0.000 promoter-TSS (NM_003952) promoter-TSS (NM_003952) -204 NM_003952 6199 Hs.534345 NM_003952 ENSG00000175634 RPS6KB2 KLS|P70-beta|P70-beta-1|P70-beta-2|S6K-beta2|S6K2|S6KB|S6KI(2)|S6Kbeta|SRK|STK14B|p70(S6K)-beta|p70S6Kb ribosomal protein S6 kinase B2 protein-coding chr19-488 chr19 1180629 1180839 + 24.3 0.000 Intergenic Intergenic -6466 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr7-1128 chr7 5709525 5709735 + 24.3 0.000 intron (NM_207111, intron 13 of 16) intron (NM_207111, intron 13 of 16) 2280 NR_106934 102466203 NR_106934 ENSG00000283419 MIR6874 hsa-mir-6874 microRNA 6874 ncRNA chr7-563 chr7 91264322 91264532 + 24.3 0.000 promoter-TSS (NM_003505) promoter-TSS (NM_003505) -6 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr5-430 chr5 169161280 169161490 + 24.3 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 102309 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr3-318 chr3 39383468 39383678 + 24.3 0.000 5' UTR (NM_017875, exon 1 of 7) 5' UTR (NM_017875, exon 1 of 7) 203 NM_017875 54977 Hs.369615 NM_017875 ENSG00000144659 SLC25A38 SIDBA2 solute carrier family 25 member 38 protein-coding chr11-1058 chr11 64608076 64608286 + 24.3 0.000 intron (NM_015080, intron 22 of 22) CpG 16961 NM_001276326 116085 Hs.174424 NM_144585 ENSG00000197891 SLC22A12 OAT4L|RST|URAT1 solute carrier family 22 member 12 protein-coding chr12-501 chr12 18752592 18752802 + 24.3 0.000 Intergenic LTR16A|LTR|ERVL 14578 NM_033328 93661 Hs.131288 NM_033328 ENSG00000177938 CAPZA3 CAPPA3|Gsg3|HEL-S-86 capping actin protein of muscle Z-line subunit alpha 3 protein-coding chr20-122 chr20 3680243 3680453 + 24.3 0.000 intron (NM_153202, intron 1 of 20) (CAGGCCC)n|Simple_repeat|Simple_repeat 2342 NM_001282447 80332 Hs.173716 NM_025220 ENSG00000149451 ADAM33 C20orf153|DJ964F7.1 ADAM metallopeptidase domain 33 protein-coding chr6-380 chr6 168007686 168007896 + 24.3 0.000 Intergenic LTR51|LTR|ERV1 -10082 NM_030615 3834 Hs.150013 NM_005355 ENSG00000125337 KIF25 KNSL3 kinesin family member 25 protein-coding chr6-573 chr6 45483037 45483247 + 24.3 0.000 intron (NM_001015051, intron 5 of 7) intron (NM_001015051, intron 5 of 7) 60867 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr8-536 chr8 70668962 70669172 + 24.3 0.000 promoter-TSS (NM_001287258) promoter-TSS (NM_001287258) 118 NM_016027 51110 Hs.118554 NM_016027 ENSG00000147592 LACTB2 CGI-83 lactamase beta 2 protein-coding chr17-765 chr17 19232310 19232520 + 24.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -4962 NM_014964 22905 Hs.743983 NM_014964 ENSG00000072134 EPN2 EHB21 epsin 2 protein-coding chr16-1452 chr16 81564383 81564593 + 24.3 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) 30586 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr3-1260 chr3 177633614 177633824 + 24.3 0.000 intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -183146 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr17-715 chr17 78986721 78986931 + 24.3 0.000 Intergenic MER4C|LTR|ERV1 -6903 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr4-409 chr4 2330143 2330353 + 24.3 0.000 TTS (NM_001172657) TTS (NM_001172657) 34566 NM_001172660 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr22-459 chr22 17966394 17966604 + 24.3 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) 14462 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chr6-426 chr6 17993459 17993669 + 24.3 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -5929 NM_001105567 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr14-495 chr14 100842691 100842901 + 24.3 0.000 intron (NR_033360, intron 5 of 6) intron (NR_033360, intron 5 of 6) -9594 NR_030528 768222 NR_030528 ENSG00000211574 MIR770 MIRN770|hsa-mir-770 microRNA 770 ncRNA chr13-196 chr13 80141194 80141404 + 24.3 0.000 Intergenic L1M7|LINE|L1 130222 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr2-1691 chr2 143231505 143231715 + 24.3 0.000 intron (NM_018460, intron 5 of 13) intron (NM_018460, intron 5 of 13) 102191 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr17-600 chr17 73232347 73232557 + 24.3 0.000 promoter-TSS (NM_032837) promoter-TSS (NM_032837) 19 NM_001351264 55028 Hs.12929 NM_017941 ENSG00000141219 C17orf80 HLC-8|MIG3|SPEP1 chromosome 17 open reading frame 80 protein-coding chr9-853 chr9 13278689 13278899 + 24.3 0.000 intron (NM_001330637, intron 1 of 46) CpG 770 NM_001261406 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr20-340 chr20 32898851 32899061 + 24.3 0.000 intron (NM_001143967, intron 11 of 26) MIRb|SINE|MIR 40033 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr1-920 chr1 64598258 64598468 + 24.3 0.000 intron (NM_020925, intron 3 of 26) intron (NM_020925, intron 3 of 26) 18516 NR_039957 100616338 NR_039957 ENSG00000264470 MIR4794 - microRNA 4794 ncRNA chr3-1204 chr3 39417469 39417679 + 24.3 0.000 Intergenic LTR13|LTR|ERVK 6520 NR_002324 6044 Hs.449909 NR_002324 ENSG00000202363 SNORA62 E2|E2-1|RNE2|RNU108 small nucleolar RNA, H/ACA box 62 snoRNA chr4-722 chr4 153127957 153128167 + 24.3 0.000 Intergenic Intergenic -24272 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr22-113 chr22 42553712 42553922 + 24.3 0.000 promoter-TSS (NM_001284334) promoter-TSS (NM_001284334) -139 NM_001284334 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr1-1302 chr1 24793936 24794146 + 24.3 0.000 intron (NM_013943, intron 1 of 5) intron (NM_013943, intron 1 of 5) 48594 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr6-453 chr6 109743779 109743989 + 24.3 0.000 intron (NM_014845, intron 10 of 22) intron (NM_014845, intron 10 of 22) 52663 NM_014845 9896 Hs.529959 NM_014845 ENSG00000112367 FIG4 ALS11|BTOP|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding chr1-672 chr1 28392155 28392365 + 24.3 0.000 intron (NM_001048183, intron 1 of 13) MER44C|DNA|TcMar-Tigger 22520 NM_001350161 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr6-224 chr6 44490211 44490421 + 24.3 0.000 Intergenic Intergenic 54675 NR_039785 100616352 NR_039785 ENSG00000266619 MIR4642 - microRNA 4642 ncRNA chr11-611 chr11 111561868 111562078 + 24.3 0.000 TTS (NM_001318799) TTS (NM_001318799) 21465 NM_001258390 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr5-764 chr5 10690555 10690765 + 24.3 0.000 intron (NM_004394, intron 2 of 3) L1MB3|LINE|L1 70574 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr2-907 chr2 172995965 172996175 + 24.3 0.000 intron (NM_001282901, intron 9 of 24) intron (NM_001282901, intron 9 of 24) 67865 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr21-216 chr21 35745721 35745931 + 24.3 0.000 Intergenic MER41G|LTR|ERV1 25111 NR_030414 768219 NR_030414 ENSG00000211590 MIR802 MIRN802|hsa-mir-802 microRNA 802 ncRNA chr14-300 chr14 103706998 103707208 + 24.3 0.000 exon (NM_001100118, exon 5 of 9) exon (NM_001100118, exon 5 of 9) 8348 NM_001371232 chr22-419 chr22 46714679 46714889 + 24.2 0.000 intron (NM_022766, intron 3 of 12) L1ME3A|LINE|L1 23468 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr9-1114 chr9 75803236 75803446 + 24.2 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger -87303 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr22-383 chr22 45164895 45165105 + 24.2 0.000 intron (NM_153645, intron 1 of 8) intron (NM_153645, intron 1 of 8) 329 NM_153645 10762 Hs.475103 NM_007172 ENSG00000093000 NUP50 NPAP60|NPAP60L nucleoporin 50 protein-coding chr15-319 chr15 69414222 69414432 + 24.2 0.000 promoter-TSS (NM_001281301) promoter-TSS (NM_001281301) -22 NM_138555 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr9-619 chr9 89022938 89023148 + 24.2 0.000 intron (NM_016848, intron 11 of 11) intron (NM_016848, intron 11 of 11) 31575 NM_005226 1903 Hs.585118 NM_005226 ENSG00000213694 S1PR3 EDG-3|EDG3|LPB3|S1P3 sphingosine-1-phosphate receptor 3 protein-coding chr10-473 chr10 72250805 72251015 + 24.2 0.000 Intergenic Intergenic -23014 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr3-612 chr3 123344185 123344395 + 24.2 0.000 intron (NM_183357, intron 3 of 20) L3b|LINE|CR1 72052 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr4-453 chr4 128718952 128719162 + 24.2 0.000 Intergenic Intergenic -90643 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr15-236 chr15 85667965 85668175 + 24.2 0.000 intron (NM_007200, intron 13 of 36) intron (NM_007200, intron 13 of 36) 48120 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr4-397 chr4 720762 720972 + 24.2 0.000 intron (NM_001317836, intron 1 of 11) intron (NM_001317836, intron 1 of 11) 15035 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr7-934 chr7 38170008 38170218 + 24.2 0.000 Intergenic Intergenic -8132 NM_001363347 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr12-542 chr12 57865447 57865657 + 24.2 0.000 Intergenic CpG -18823 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr12-255 chr12 78864465 78864675 + 24.2 0.000 promoter-TSS (NM_005639) promoter-TSS (NM_005639) -204 NM_005639 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr8-541 chr8 133882952 133883162 + 24.2 0.000 Intergenic Intergenic -3439 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr7-765 chr7 30038310 30038520 + 24.2 0.000 intron (NM_001363473, intron 1 of 12) L1MC|LINE|L1 -6670 NM_001363474 84725 Hs.233495 NM_032639 ENSG00000106086 PLEKHA8 FAPP2 pleckstrin homology domain containing A8 protein-coding chr16-226 chr16 85234645 85234855 + 24.2 0.000 Intergenic CpG 26954 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr15-216 chr15 41971642 41971852 + 24.2 0.000 intron (NM_139265, intron 1 of 5) intron (NM_139265, intron 1 of 5) 810 NM_139265 30844 Hs.143703 NM_139265 ENSG00000103966 EHD4 PAST4 EH domain containing 4 protein-coding chr1-528 chr1 155135751 155135961 + 24.2 0.000 promoter-TSS (NM_001122837) promoter-TSS (NM_001122837) 4 NM_001287587 55974 Hs.292154 NM_018845 ENSG00000169241 SLC50A1 HsSWEET1|RAG1AP1|SCP|SWEET1|slv solute carrier family 50 member 1 protein-coding chr22-256 chr22 30635645 30635855 + 24.2 0.000 promoter-TSS (NM_001318370) promoter-TSS (NM_001318370) -31 NM_001318371 339665 Hs.660384 NM_001001479 ENSG00000100036 SLC35E4 - solute carrier family 35 member E4 protein-coding chr20-241 chr20 3408751 3408961 + 24.2 0.000 Intergenic Intergenic -1194 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr15-242 chr15 62391849 62392059 + 24.2 0.000 Intergenic CpG 48925 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr5-530 chr5 38595334 38595544 + 24.2 0.000 promoter-TSS (NM_002310) promoter-TSS (NM_002310) -34 NM_002310 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS LIF receptor subunit alpha protein-coding chr7-936 chr7 43572596 43572806 + 24.2 0.000 Intergenic Intergenic -10407 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr9-644 chr9 35538397 35538607 + 24.2 0.000 promoter-TSS (NM_001135999) promoter-TSS (NM_001135999) -130 NM_001135999 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr22-478 chr22 31451803 31452013 + 24.2 0.000 intron (NM_001164502, intron 8 of 16) intron (NM_001164502, intron 8 of 16) 37648 NM_001164501 56478 Hs.517559 NM_019843 ENSG00000184708 EIF4ENIF1 4E-T|Clast4 eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding chr14-353 chr14 103664093 103664303 + 24.2 0.000 intron (NM_182923, intron 5 of 14) AluSz|SINE|Alu 35010 NM_001130107 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr10-528 chr10 17201492 17201702 + 24.2 0.000 promoter-TSS (NM_001321007) promoter-TSS (NM_001321007) 75 NM_001351221 1787 Hs.351665 NM_004412 ENSG00000107614 TRDMT1 DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 tRNA aspartic acid methyltransferase 1 protein-coding chr11-1025 chr11 102599736 102599946 + 24.2 0.000 intron (NM_004771, intron 6 of 9) intron (NM_004771, intron 6 of 9) 25491 NM_004771 9313 Hs.591946 NM_004771 ENSG00000137674 MMP20 AI2A2|MMP-20 matrix metallopeptidase 20 protein-coding chr1-2678 chr1 200150753 200150963 + 24.2 0.000 intron (NM_205860, intron 7 of 7) intron (NM_205860, intron 7 of 7) 108033 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr12-362 chr12 121296904 121297114 + 24.2 0.000 promoter-TSS (NM_001270485) promoter-TSS (NM_001270485) -256 NM_172226 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr9-362 chr9 133979294 133979504 + 24.2 0.000 intron (NM_001134398, intron 1 of 29) CpG 12925 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr6-422 chr6 169035381 169035591 + 24.2 0.000 intron (NR_134622, intron 1 of 1) intron (NR_134622, intron 1 of 1) 157 NR_134622 101929460 Hs.355225 NR_134622 ENSG00000229720 LOC101929460 - uncharacterized LOC101929460 ncRNA chr14-364 chr14 22537016 22537226 + 24.2 0.000 Intergenic Intergenic 19941 NR_146543 105370400 NR_146543 ENSG00000259054 LINC02332 - long intergenic non-protein coding RNA 2332 ncRNA chr3-811 chr3 51637988 51638198 + 24.2 0.000 intron (NM_001322253, intron 12 of 23) intron (NM_001322253, intron 12 of 23) -33082 NR_024012 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr1-1747 chr1 201266839 201267049 + 24.2 0.000 Intergenic Intergenic -16508 NM_000299 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr1-1638 chr1 180028187 180028397 + 24.2 0.000 intron (NM_014810, intron 14 of 37) MER103C|DNA|hAT-Charlie 73482 NM_014810 9857 Hs.413045 NM_014810 ENSG00000135837 CEP350 CAP350|GM133 centrosomal protein 350 protein-coding chr19-639 chr19 18304715 18304925 + 24.2 0.000 Intergenic Intergenic 18256 NM_001252129 25804 Hs.515255 NM_012321 ENSG00000130520 LSM4 GRP|YER112W LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr7-706 chr7 5425676 5425886 + 24.2 0.000 TTS (NM_001354886) TTS (NM_001354886) -2235 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr17-486 chr17 79797169 79797379 + 24.2 0.000 promoter-TSS (NM_020649) promoter-TSS (NM_020649) -197 NM_020649 57332 Hs.387258 NM_020649 ENSG00000141570 CBX8 PC3|RC1 chromobox 8 protein-coding chr7-474 chr7 106205760 106205970 + 24.2 0.000 Intergenic Intergenic 79118 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr8-462 chr8 687061 687271 + 24.2 0.000 intron (NR_156467, intron 3 of 5) intron (NR_156467, intron 3 of 5) 44058 NM_207332 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chr14-338 chr14 96253141 96253351 + 24.2 0.000 Intergenic Intergenic -2964 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr3-809 chr3 48402233 48402443 + 24.2 0.000 Intergenic Intergenic 27125 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chr12-340 chr12 6724011 6724221 + 24.2 0.000 promoter-TSS (NM_001164093) promoter-TSS (NM_001164093) 70 NM_016319 50813 Hs.530823 NM_016319 ENSG00000111652 COPS7A CSN7|CSN7A|SGN7a COP9 signalosome subunit 7A protein-coding chr19-729 chr19 55418241 55418451 + 24.2 0.000 Intergenic Intergenic -10558 NM_014501 27338 Hs.396393 NM_014501 ENSG00000108106 UBE2S E2-EPF|E2EPF|EPF5 ubiquitin conjugating enzyme E2 S protein-coding chr12-428 chr12 52044234 52044444 + 24.2 0.000 intron (NM_001202234, intron 2 of 7) intron (NM_001202234, intron 2 of 7) 6624 NM_001202234 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr12-1124 chr12 57152038 57152248 + 24.2 0.000 intron (NM_002332, intron 6 of 88) intron (NM_002332, intron 6 of 88) -4524 NR_131939 105751187 Hs.609540 NR_131938 ENSG00000259125 LRP1-AS - LRP1 antisense RNA ncRNA chr19-904 chr19 47122476 47122686 + 24.2 0.000 Intergenic Intergenic -8254 NM_001145714 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr1-1514 chr1 32798295 32798505 + 24.2 0.000 intron (NM_003680, intron 4 of 12) intron (NM_003680, intron 4 of 12) -19042 NM_001256121 64766 Hs.440880 NM_022753 ENSG00000116497 S100PBP S100PBPR S100P binding protein protein-coding chr20-240 chr20 1266135 1266345 + 24.2 0.000 promoter-TSS (NM_014723) promoter-TSS (NM_014723) -54 NM_001318234 9751 Hs.323833 NM_014723 ENSG00000101298 SNPH - syntaphilin protein-coding chr19-556 chr19 45039065 45039275 + 24.2 0.000 TTS (NM_006509) TTS (NM_006509) 125 NM_007056 11129 Hs.466917 NM_007056 ENSG00000104859 CLASRP CLASP|SFRS16|SWAP2 CLK4 associating serine/arginine rich protein protein-coding chr12-612 chr12 87440237 87440447 + 24.2 0.000 Intergenic LTR8B|LTR|ERV1 109603 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr1-195 chr1 212432841 212433051 + 24.2 0.000 promoter-TSS (NR_026598) promoter-TSS (NR_026598) 26 NR_026598 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr17-439 chr17 44108689 44108899 + 24.2 0.000 intron (NM_001015053, intron 3 of 26) intron (NM_001015053, intron 3 of 26) -7118 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 - uncharacterized LOC105371789 ncRNA chr11-976 chr11 66678514 66678724 + 24.2 0.000 promoter-TSS (NM_031492) promoter-TSS (NM_031492) -732 NM_001286135 83759 Hs.618713 NM_031492 ENSG00000173914 RBM4B RBM30|RBM4L|ZCCHC15|ZCCHC21B|ZCRB3B RNA binding motif protein 4B protein-coding chr9-664 chr9 23769738 23769948 + 24.2 0.000 intron (NM_001351456, intron 2 of 8) intron (NM_001351456, intron 2 of 8) 51466 NM_001351465 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding chr12-309 chr12 112108545 112108755 + 24.2 0.000 intron (NM_024953, intron 1 of 23) CpG 133 NM_024953 80018 Hs.530941 NM_024953 ENSG00000111300 NAA25 C12orf30|MDM20|NAP1 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding chr12-702 chr12 53845421 53845631 + 24.2 0.000 Intergenic Intergenic -88492 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr7-807 chr7 129468056 129468266 + 24.2 0.000 intron (NM_020704, intron 17 of 20) intron (NM_020704, intron 17 of 20) 33729 NM_020704 57464 Hs.489988 NM_020704 ENSG00000128578 STRIP2 FAM40B|FAR11B striatin interacting protein 2 protein-coding chr19-800 chr19 47745438 47745648 + 24.2 0.000 promoter-TSS (NM_015710) promoter-TSS (NM_015710) -3 NM_015710 29997 Hs.421907 NM_015710 ENSG00000105373 NOP53 GLTSCR2|PICT-1|PICT1 NOP53 ribosome biogenesis factor protein-coding chr1-791 chr1 45802833 45803043 + 24.2 0.000 promoter-TSS (NM_015112) promoter-TSS (NM_015112) -669 NM_001324320 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr1-1911 chr1 214585183 214585393 + 24.2 0.000 Intergenic Intergenic -17907 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr20-270 chr20 47576699 47576909 + 24.2 0.000 intron (NM_181659, intron 1 of 22) intron (NM_181659, intron 1 of 22) 74917 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr16-691 chr16 69754720 69754930 + 24.2 0.000 intron (NR_074074, intron 1 of 7) CpG-9890 101 NM_014062 28987 Hs.271695 NM_014062 ENSG00000141101 NOB1 ART-4|MST158|MSTP158|NOB1P|PSMD8BP1 NIN1 (RPN12) binding protein 1 homolog protein-coding chr11-912 chr11 75938603 75938813 + 24.2 0.000 intron (NM_003369, intron 6 of 14) L1MEc|LINE|L1 123498 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr8-155 chr8 92966019 92966229 + 24.2 0.000 promoter-TSS (NM_001171795) promoter-TSS (NM_001171795) 20 NM_001171799 286144 Hs.440643 NM_001171795 ENSG00000205133 TRIQK C8orf83|PRO0845|UPF0599 triple QxxK/R motif containing protein-coding chr17-1048 chr17 82351813 82352023 + 24.2 0.000 Intergenic Intergenic -7329 NM_207459 400629 Hs.231897 NM_207459 ENSG00000182459 TEX19 - testis expressed 19 protein-coding chr10-354 chr10 102432536 102432746 + 24.2 0.000 promoter-TSS (NM_024040) promoter-TSS (NM_024040) -67 NM_024040 79004 Hs.500874 NM_024040 ENSG00000107874 CUEDC2 C10orf66|bA18I14.5 CUE domain containing 2 protein-coding chr12-636 chr12 69157184 69157394 + 24.2 0.000 Intergenic LTR50|LTR|ERVL -82280 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr4-454 chr4 139556257 139556467 + 24.2 0.000 non-coding (NR_131339, exon 1 of 4) non-coding (NR_131339, exon 1 of 4) 407 NR_131339 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr2-1381 chr2 36507452 36507662 + 24.2 0.000 intron (NM_016441, intron 8 of 16) intron (NM_016441, intron 8 of 16) 90611 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr6-320 chr6 21348472 21348682 + 24.2 0.000 Intergenic Intergenic 163315 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr6-1055 chr6 10962767 10962977 + 24.2 0.000 intron (NM_001040274, intron 28 of 29) Charlie1b|DNA|hAT-Charlie -8783 NR_125851 101928191 Hs.638939 NR_125851 LOC101928191 - uncharacterized LOC101928191 ncRNA chr2-160 chr2 121736951 121737161 + 24.2 0.000 promoter-TSS (NM_032390) promoter-TSS (NM_032390) -181 NM_032390 84365 Hs.367842 NM_032390 ENSG00000155438 NIFK MKI67IP|Nopp34 nucleolar protein interacting with the FHA domain of MKI67 protein-coding chr12-328 chr12 48811257 48811467 + 24.2 0.000 Intergenic Intergenic -3118 NM_001206917 784 Hs.250712 NM_000725 ENSG00000167535 CACNB3 CAB3|CACNLB3 calcium voltage-gated channel auxiliary subunit beta 3 protein-coding chr20-98 chr20 297336 297546 + 24.2 0.000 promoter-TSS (NM_033089) promoter-TSS (NM_033089) -129 NM_033089 85364 Hs.28608 NM_033089 ENSG00000247315 ZCCHC3 C20orf99 zinc finger CCHC-type containing 3 protein-coding chr7-484 chr7 100081709 100081919 + 24.2 0.000 promoter-TSS (NM_001318137) promoter-TSS (NM_001318137) -50 NM_001278290 7551 Hs.435302 NM_017715 ENSG00000166526 ZNF3 A8-51|HF.12|KOX25|PP838|Zfp113 zinc finger protein 3 protein-coding chr13-183 chr13 101397936 101398146 + 24.2 0.000 intron (NM_001350749, intron 2 of 43) intron (NM_001350749, intron 2 of 43) 18467 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr12-246 chr12 123762228 123762438 + 24.2 0.000 promoter-TSS (NM_207437).2 promoter-TSS (NM_207437).2 -162 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr1-371 chr1 28736793 28737003 + 24.2 0.000 promoter-TSS (NM_016258) promoter-TSS (NM_016258) -42 NM_016258 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr8-295 chr8 140599872 140600082 + 24.2 0.000 intron (NM_001164623, intron 1 of 17) AluSx1|SINE|Alu 35656 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr8-935 chr8 41650288 41650498 + 24.2 0.000 exon (NM_001364841, exon 1 of 3) exon (NM_001364841, exon 1 of 3) 424 NM_001364841 157848 NM_152568 ENSG00000165066 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding chr5-863 chr5 149320906 149321116 + 24.2 0.000 intron (NM_152406, intron 14 of 18) MamRep605|LTR?|LTR? -24488 NM_152407 134266 Hs.511816 NM_152407 ENSG00000164284 GRPEL2 Mt-GrpE#2 GrpE like 2, mitochondrial protein-coding chr7-585 chr7 135748806 135749016 + 24.2 0.000 promoter-TSS (NM_205855) promoter-TSS (NM_205855) -98 NM_001369697 389558 Hs.55200 NM_205855 ENSG00000189320 FAM180A UNQ1940 family with sequence similarity 180 member A protein-coding chr7-808 chr7 131104195 131104405 + 24.2 0.000 intron (NR_109850, intron 2 of 5) intron (NR_109850, intron 2 of 5) 2730 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr8-477 chr8 67062149 67062359 + 24.2 0.000 promoter-TSS (NM_006837) promoter-TSS (NM_006837) -121 NM_006837 10987 Hs.491912 NM_006837 ENSG00000121022 COPS5 CSN5|JAB1|MOV-34|SGN5 COP9 signalosome subunit 5 protein-coding chr5-867 chr5 158382567 158382777 + 24.2 0.000 intron (NR_109888, intron 1 of 6) MLT1H|LTR|ERVL-MaLR 27101 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr2-295 chr2 217944095 217944305 + 24.2 0.000 promoter-TSS (NM_022648) promoter-TSS (NM_022648) -130 NM_022648 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr11-895 chr11 12377485 12377695 + 24.2 0.000 promoter-TSS (NM_018222) promoter-TSS (NM_018222) 19 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr13-130 chr13 102596259 102596469 + 24.2 0.000 promoter-TSS (NM_003291) promoter-TSS (NM_003291) -622 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr2-701 chr2 38720845 38721055 + 24.0 0.000 intron (NM_138801, intron 4 of 6) MLT1G3|LTR|ERVL-MaLR 30411 NM_001031684 6432 Hs.309090 NM_006276 ENSG00000115875 SRSF7 9G8|AAG3|SFRS7 serine and arginine rich splicing factor 7 protein-coding chr17-571 chr17 40441095 40441305 + 24.0 0.000 Intergenic Intergenic -2250 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr2-499 chr2 112254936 112255146 + 24.0 0.000 promoter-TSS (NM_032494) promoter-TSS (NM_032494) 1 NM_032494 84524 Hs.418416 NM_032494 ENSG00000144161 ZC3H8 Fliz1|ZC3HDC8 zinc finger CCCH-type containing 8 protein-coding chr11-845 chr11 111938896 111939106 + 24.0 0.000 intron (NM_001037954, intron 1 of 19) intron (NM_001037954, intron 1 of 19) 1658 NM_001037954 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr11-591 chr11 69000951 69001161 + 24.0 0.000 Intergenic Tigger11a|DNA|TcMar-Tigger -11298 NR_120541 101928200 Hs.703759 NR_120541 ENSG00000256508 MRGPRF-AS1 - MRGPRF antisense RNA 1 ncRNA chr15-221 chr15 51132816 51133026 + 24.0 0.000 intron (NR_146310, intron 1 of 2) intron (NR_146310, intron 1 of 2) -27645 NM_207381 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr1-652 chr1 40161265 40161475 + 24.0 0.000 promoter-TSS (NM_012421) promoter-TSS (NM_012421) -17 NM_012421 6018 Hs.205627 NM_012421 ENSG00000117000 RLF ZN-15L|ZNF292L rearranged L-myc fusion protein-coding chr1-695 chr1 67430279 67430489 + 24.0 0.000 promoter-TSS (NM_001018069) promoter-TSS (NM_001018069) 18 NM_001018067 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr9-966 chr9 116075276 116075486 + 24.0 0.000 Intergenic Intergenic -78410 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr3-812 chr3 54891739 54891949 + 24.0 0.000 intron (NM_018398, intron 25 of 37) intron (NM_018398, intron 25 of 37) 9411 NR_046666 100874237 Hs.570583 NR_046666 ENSG00000243715 CACNA2D3-AS1 - CACNA2D3 antisense RNA 1 ncRNA chr11-435 chr11 119205985 119206195 + 24.0 0.000 promoter-TSS (NM_005188) promoter-TSS (NM_005188) -186 NM_005188 867 Hs.504096 NM_005188 ENSG00000110395 CBL C-CBL|CBL2|FRA11B|NSLL|RNF55 Cbl proto-oncogene protein-coding chr7-903 chr7 78279079 78279289 + 24.0 0.000 intron (NM_001301128, intron 9 of 20) intron (NM_001301128, intron 9 of 20) -68058 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr10-778 chr10 28668624 28668834 + 24.0 0.000 Intergenic CpG -8792 NM_012342 25805 Hs.533336 NM_012342 ENSG00000095739 BAMBI NMA BMP and activin membrane bound inhibitor protein-coding chr16-313 chr16 56682197 56682407 + 24.0 0.000 promoter-TSS (NM_005952) promoter-TSS (NM_005952) -168 NM_005952 4501 Hs.374950 NM_005952 ENSG00000187193 MT1X MT-1l|MT1 metallothionein 1X protein-coding chr15-577 chr15 38795573 38795783 + 24.0 0.000 Intergenic Intergenic 99080 NR_160786 chr11-1547 chr11 12828290 12828500 + 24.0 0.000 intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 153974 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding ML143377.1-1 ML143377.1 293536 293746 + 24.0 0.000 NA NA NA NA chr1-511 chr1 157138345 157138555 + 24.0 0.000 promoter-TSS (NM_001145312) promoter-TSS (NM_001145312) -55 NM_001145312 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr15-366 chr15 62119465 62119675 + 24.0 0.000 Intergenic Intergenic 45715 NM_001007595 388125 Hs.144372 NM_001007595 ENSG00000205502 C2CD4B FAM148B|NLF2 C2 calcium dependent domain containing 4B protein-coding chr1-1397 chr1 205750152 205750362 + 24.0 0.000 promoter-TSS (NM_022731) promoter-TSS (NM_022731) -75 NM_022731 64710 Hs.213061 NM_022731 ENSG00000069275 NUCKS1 JC7|NUCKS nuclear casein kinase and cyclin dependent kinase substrate 1 protein-coding chr5-451 chr5 61467774 61467984 + 24.0 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 135621 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr12-624 chr12 25694110 25694320 + 24.0 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -45637 NM_001352234 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr22-149 chr22 41381508 41381718 + 24.0 0.000 promoter-TSS (NM_003216) promoter-TSS (NM_003216) -329 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr12-449 chr12 123126538 123126748 + 24.0 0.000 Intergenic Intergenic -16154 NM_001300801 57605 Hs.272759 NM_020845 ENSG00000090975 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein membrane associated 2 protein-coding chr7-654 chr7 112143667 112143877 + 24.0 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 62627 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr17-490 chr17 8156424 8156634 + 24.0 0.000 Intergenic CpG -4125 NM_002616 5187 Hs.445534 NM_002616 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian regulator 1 protein-coding chr15-321 chr15 77070973 77071183 + 24.0 0.000 promoter-TSS (NM_001168412) promoter-TSS (NM_001168412) 31 NM_198902 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr2-724 chr2 235605851 235606061 + 24.0 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -88035 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr16-440 chr16 84599576 84599786 + 24.0 0.000 intron (NM_021149, intron 2 of 3) intron (NM_021149, intron 2 of 3) 18397 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr2-430 chr2 207166147 207166357 + 24.0 0.000 promoter-TSS (NM_003709) promoter-TSS (NM_003709) -66 NR_073108 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr7-150 chr7 105876561 105876771 + 24.0 0.000 promoter-TSS (NM_020725) promoter-TSS (NM_020725) -81 NM_020725 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr16-622 chr16 19523725 19523935 + 24.0 0.000 promoter-TSS (NM_001323569) promoter-TSS (NM_001323569) -112 NM_001199022 9738 Hs.279912 NM_014711 ENSG00000103540 CCP110 CP110|Cep110 centriolar coiled-coil protein 110 protein-coding chr3-499 chr3 194443918 194444128 + 24.0 0.000 intron (NM_001367549, intron 15 of 33) L1ME3Cz|LINE|L1 24216 NM_024524 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr17-538 chr17 82273480 82273690 + 24.0 0.000 non-coding (NR_110578, exon 1 of 9) non-coding (NR_110578, exon 1 of 9) 115 NM_001363749 1453 Hs.631725 NM_001893 ENSG00000141551 CSNK1D ASPS|CKI-delta|CKId|CKIdelta|FASPS2|HCKID casein kinase 1 delta protein-coding chr21-88 chr21 46392966 46393176 + 24.0 0.000 intron (NM_001315529, intron 21 of 46) intron (NM_001315529, intron 21 of 46) -65820 NM_015151 23181 Hs.189585 NM_015151 ENSG00000160305 DIP2A C21orf106|DIP2 disco interacting protein 2 homolog A protein-coding chr2-1060 chr2 210955643 210955853 + 24.0 0.000 Intergenic Intergenic 338177 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr19-792 chr19 13132520 13132730 + 24.0 0.000 intron (NM_052876, intron 1 of 5) MIRb|SINE|MIR 14361 NM_052876 112939 Hs.531614 NM_052876 ENSG00000160877 NACC1 BEND8|BTBD14B|BTBD30|NAC-1|NAC1|NECFM nucleus accumbens associated 1 protein-coding chr16-204 chr16 2904281 2904491 + 24.0 0.000 Intergenic CpG -7593 NM_032296 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr8-176 chr8 54022297 54022507 + 24.0 0.000 promoter-TSS (NR_109902) promoter-TSS (NR_109902) 46 NM_201437 6917 Hs.491745 NM_006756 ENSG00000187735 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A1 protein-coding chr9-804 chr9 89606185 89606395 + 24.0 0.000 3' UTR (NM_006705, exon 4 of 4) 3' UTR (NM_006705, exon 4 of 4) 1278 NM_006705 10912 Hs.9701 NM_006705 ENSG00000130222 GADD45G CR6|DDIT2|GADD45gamma|GRP17 growth arrest and DNA damage inducible gamma protein-coding chr4-138 chr4 184793082 184793292 + 24.0 0.000 intron (NM_001995, intron 2 of 20) intron (NM_001995, intron 2 of 20) 5859 NR_003542 643036 Hs.689630 NR_003542 ENSG00000249138 SLED1 - proteoglycan 3, pro eosinophil major basic protein 2 pseudogene pseudo chr20-282 chr20 51579269 51579479 + 24.0 0.000 Intergenic Intergenic -16535 NM_001136021 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr13-70 chr13 112689924 112690134 + 24.0 0.000 promoter-TSS (NM_015205) promoter-TSS (NM_015205) -300 NM_015205 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr11-475 chr11 86955346 86955556 + 24.0 0.000 promoter-TSS (NR_038905) promoter-TSS (NR_038905) -56 NM_012193 8322 Hs.591968 NM_012193 ENSG00000174804 FZD4 CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4 frizzled class receptor 4 protein-coding chr5-516 chr5 120605004 120605214 + 24.0 0.000 intron (NM_001308088, intron 1 of 3) L1PA16|LINE|L1 73645 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chrX-349 chrX 45479252 45479462 + 24.0 0.000 Intergenic Intergenic -26031 NR_104644 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA chr15-422 chr15 68187621 68187831 + 24.0 0.000 exon (NM_001320687, exon 15 of 15) exon (NM_001320687, exon 15 of 15) 18384 NM_001031733 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr19-662 chr19 19109541 19109751 + 24.0 0.000 intron (NM_178526, intron 7 of 7) AluSx1|SINE|Alu 28832 NM_017814 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr18-146 chr18 45967256 45967466 + 24.0 0.000 promoter-TSS (NM_020964) promoter-TSS (NM_020964) -32 NM_020964 57724 Hs.514843 NM_020964 ENSG00000152223 EPG5 HEEW1|KIAA1632|VICIS ectopic P-granules autophagy protein 5 homolog protein-coding chr8-992 chr8 127831666 127831876 + 24.0 0.000 intron (NR_003367, intron 1 of 8) L2|LINE|L2 35809 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr17-828 chr17 60506376 60506586 + 24.0 0.000 intron (NM_006380, intron 1 of 12) L2b|LINE|L2 19759 NM_001282476 10513 Hs.84084 NM_006380 ENSG00000062725 APPBP2 APP-BP2|HS.84084|PAT1 amyloid beta precursor protein binding protein 2 protein-coding chrX-123 chrX 133726176 133726386 + 24.0 0.000 intron (NM_001164617, intron 3 of 8) intron (NM_001164617, intron 3 of 8) -171162 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr13-92 chr13 73058756 73058966 + 24.0 0.000 promoter-TSS (NM_001730) promoter-TSS (NM_001730) -144 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr1-1061 chr1 173507240 173507450 + 24.0 0.000 intron (NM_178527, intron 24 of 27) intron (NM_178527, intron 24 of 27) 30010 NM_004905 9588 Hs.120 NM_004905 ENSG00000117592 PRDX6 1-Cys|AOP2|HEL-S-128m|NSGPx|PRX|aiPLA2|p29 peroxiredoxin 6 protein-coding chr2-788 chr2 174901181 174901391 + 24.0 0.000 intron (NM_001025201, intron 6 of 12) L2c|LINE|L2 -53668 NM_001206602 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr11-597 chr11 1750992 1751202 + 24.0 0.000 promoter-TSS (NM_001170820) promoter-TSS (NM_001170820) -502 NM_001170820 402778 Hs.121575 NM_001170820 ENSG00000244242 IFITM10 DSPA3 interferon induced transmembrane protein 10 protein-coding chr10-539 chr10 112183774 112183984 + 24.0 0.000 promoter-TSS (NM_020918) promoter-TSS (NM_020918) -114 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr6-425 chr6 13813569 13813779 + 24.0 0.000 intron (NM_001031713, intron 1 of 8) intron (NM_001031713, intron 1 of 8) 886 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr17-416 chr17 41966654 41966864 + 24.0 0.000 promoter-TSS (NM_033133) promoter-TSS (NM_033133) -36 NM_033133 1267 Hs.273621 NM_033133 ENSG00000173786 CNP CNP1 2',3'-cyclic nucleotide 3' phosphodiesterase protein-coding chr3-825 chr3 129439280 129439490 + 24.0 0.000 promoter-TSS (NM_018262) promoter-TSS (NM_018262) 563 NM_003925 8930 Hs.35947 NM_003925 ENSG00000129071 MBD4 MED1 methyl-CpG binding domain 4, DNA glycosylase protein-coding chr14-400 chr14 36819038 36819248 + 24.0 0.000 intron (NM_001171170, intron 2 of 10) intron (NM_001171170, intron 2 of 10) 133248 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr15-218 chr15 49620871 49621081 + 24.0 0.000 promoter-TSS (NM_152647) promoter-TSS (NM_152647) -72 NM_001144955 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr21-90 chr21 43600715 43600925 + 24.0 0.000 intron (NM_007031, intron 7 of 8) intron (NM_007031, intron 7 of 8) 9169 NR_106718 102464825 NR_106718 ENSG00000278433 MIR6070 hsa-mir-6070 microRNA 6070 ncRNA chr6-386 chr6 47168291 47168501 + 24.0 0.000 Intergenic Intergenic -126064 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr13-499 chr13 51643973 51644183 + 24.0 0.000 intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 59616 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr6-249 chr6 71489812 71490022 + 24.0 0.000 Intergenic Intergenic 68890 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr5-485 chr5 178642527 178642737 + 24.0 0.000 Intergenic MER70A|LTR|ERVL -15582 NM_020666 57396 Hs.406557 NM_020666 ENSG00000113240 CLK4 - CDC like kinase 4 protein-coding chr14-501 chr14 34875262 34875472 + 24.0 0.000 promoter-TSS (NM_182648) promoter-TSS (NM_182648) -7 NM_182648 11177 Hs.509140 NM_013448 ENSG00000198604 BAZ1A ACF1|WALp1|WCRF180|hACF1 bromodomain adjacent to zinc finger domain 1A protein-coding chr16-596 chr16 12057394 12057604 + 24.0 0.000 intron (NM_032167, intron 8 of 20) intron (NM_032167, intron 8 of 20) 80765 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr17-438 chr17 32349977 32350187 + 24.0 0.000 promoter-TSS (NM_001098507) promoter-TSS (NM_001098507) -27 NR_030362 693217 NR_030362 ENSG00000283774 MIR632 MIRN632|hsa-mir-632 microRNA 632 ncRNA chr18-118 chr18 35355246 35355456 + 24.0 0.000 Intergenic L1MD2|LINE|L1 -10931 NM_006965 7572 Hs.514802 NM_006965 ENSG00000172466 ZNF24 KOX17|RSG-A|ZNF191|ZSCAN3|Zfp191 zinc finger protein 24 protein-coding chr10-443 chr10 80136232 80136442 + 24.0 0.000 intron (NM_001012973, intron 1 of 3) intron (NM_001012973, intron 1 of 3) 3607 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr17-853 chr17 40542705 40542915 + 24.0 0.000 Intergenic Intergenic 17584 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr12-740 chr12 1250736 1250946 + 24.0 0.000 intron (NR_027946, intron 13 of 18) intron (NR_027946, intron 13 of 18) 223093 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr12-714 chr12 122834589 122834799 + 24.0 0.000 promoter-TSS (NM_001303099) promoter-TSS (NM_001303099) -54 NM_001303099 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr10-458 chr10 73625231 73625441 + 24.0 0.000 intron (NM_001350995, intron 1 of 21) CpG 645 NM_001350995 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr1-1137 chr1 205919098 205919308 + 24.0 0.000 intron (NM_052934, intron 18 of 20) intron (NM_052934, intron 18 of 20) -15710 NR_110984 103021296 Hs.613648 NR_110983 SLC26A9-AS1 - SLC26A9 and RAB7B antisense RNA 1 ncRNA chr4-371 chr4 24763941 24764151 + 24.0 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -31527 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr1-1598 chr1 53896874 53897084 + 24.0 0.000 intron (NM_001324316, intron 1 of 1) intron (NM_001324316, intron 1 of 1) 2792 NR_136693 1733 Hs.251415 NM_000792 ENSG00000211452 DIO1 5DI|TXDI1 iodothyronine deiodinase 1 protein-coding chr19-719 chr19 55606275 55606485 + 24.0 0.000 Intergenic Intergenic 6092 NM_153219 147807 Hs.440291 NM_153219 ENSG00000171443 ZNF524 - zinc finger protein 524 protein-coding chr12-349 chr12 101407537 101407747 + 24.0 0.000 exon (NM_001177, exon 1 of 6) exon (NM_001177, exon 1 of 6) 130 NM_001177 400 Hs.372616 NM_001177 ENSG00000120805 ARL1 ARFL1 ADP ribosylation factor like GTPase 1 protein-coding chr10-892 chr10 101578796 101579006 + 24.0 0.000 TTS (NM_001308382) TTS (NM_001308382) 9356 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr5-602 chr5 32190242 32190452 + 24.0 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -16028 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr17-775 chr17 49315591 49315801 + 24.0 0.000 intron (NR_135579, intron 3 of 7) intron (NR_135579, intron 3 of 7) -27242 NR_106745 102465137 NR_106745 ENSG00000273500 MIR6129 hsa-mir-6129 microRNA 6129 ncRNA chr2-1207 chr2 204469346 204469556 + 24.0 0.000 Intergenic Intergenic -76024 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr1-1648 chr1 221315326 221315536 + 24.0 0.000 Intergenic Intergenic 20865 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr1-1077 chr1 11012388 11012598 + 24.0 0.000 promoter-TSS (NM_007375) promoter-TSS (NM_007375) -129 NM_007375 23435 Hs.300624 NM_007375 ENSG00000120948 TARDBP ALS10|TDP-43 TAR DNA binding protein protein-coding chr1-1825 chr1 233081562 233081772 + 24.0 0.000 intron (NM_014801, intron 23 of 33) intron (NM_014801, intron 23 of 33) 130825 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr9-871 chr9 81574530 81574740 + 24.0 0.000 Intergenic Intergenic 114900 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr7-653 chr7 111828121 111828331 + 24.0 0.000 intron (NM_001363540, intron 26 of 52) intron (NM_001363540, intron 26 of 52) 19721 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA GL383527.1-1 GL383527.1 131311 131521 + 24.0 0.000 NA NA NA NA chr16-662 chr16 19067486 19067696 + 24.0 0.000 promoter-TSS (NR_119382) promoter-TSS (NR_119382) -23 NM_016138 10229 Hs.157113 NM_016138 ENSG00000167186 COQ7 CAT5|CLK-1|CLK1|COQ10D8 coenzyme Q7, hydroxylase protein-coding chr11-540 chr11 2137335 2137545 + 24.0 0.000 promoter-TSS (NM_001291861) promoter-TSS (NM_001291861) -152 NM_001291861 3481 Hs.272259 NM_000612 ENSG00000167244 IGF2 C11orf43|GRDF|IGF-II|PP9974 insulin like growth factor 2 protein-coding chr4-360 chr4 120066594 120066804 + 24.0 0.000 exon (NM_002358, exon 1 of 5) exon (NM_002358, exon 1 of 5) 149 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr8-221 chr8 119416860 119417070 + 24.0 0.000 exon (NM_002514, exon 2 of 5) exon (NM_002514, exon 2 of 5) 519 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr6-220 chr6 117602345 117602555 + 24.0 0.000 promoter-TSS (NM_020399) promoter-TSS (NM_020399) 61 NM_001017408 57120 Hs.191539 NM_020399 ENSG00000047932 GOPC CAL|FIG|GOPC1|PIST|dJ94G16.2 golgi associated PDZ and coiled-coil motif containing protein-coding chr8-577 chr8 120857607 120857817 + 24.0 0.000 Intergenic Intergenic -45666 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr1-307 chr1 109075938 109076148 + 24.0 0.000 promoter-TSS (NM_005645) promoter-TSS (NM_005645) -40 NM_005645 6884 Hs.632426 NM_005645 ENSG00000197780 TAF13 MRT60|TAF(II)18|TAF2K|TAFII-18|TAFII18 TATA-box binding protein associated factor 13 protein-coding chr17-518 chr17 43125374 43125584 + 24.0 0.000 promoter-TSS (NM_007300) promoter-TSS (NM_007300) 4 NM_007294 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr15-447 chr15 83747117 83747327 + 24.0 0.000 intron (NM_207517, intron 3 of 29) intron (NM_207517, intron 3 of 29) 93099 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr12-892 chr12 104805296 104805506 + 24.0 0.000 intron (NM_032148, intron 11 of 11) intron (NM_032148, intron 11 of 11) 152889 NM_001352172 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr22-199 chr22 31084942 31085152 + 24.0 0.000 promoter-TSS (NM_001207018) promoter-TSS (NM_001207018) 51 NM_001207018 6525 Hs.149098 NM_006932 ENSG00000183963 SMTN - smoothelin protein-coding chr15-266 chr15 45402309 45402519 + 24.0 0.000 promoter-TSS (NM_001321015) promoter-TSS (NM_001321015) 78 NR_136647 79029 Hs.369657 NM_024063 ENSG00000171763 SPATA5L1 - spermatogenesis associated 5 like 1 protein-coding chr17-240 chr17 39197554 39197764 + 24.0 0.000 promoter-TSS (NM_000723) promoter-TSS (NM_000723) 10 NM_000723 782 Hs.635 NM_000723 ENSG00000067191 CACNB1 CAB1|CACNLB1|CCHLB1 calcium voltage-gated channel auxiliary subunit beta 1 protein-coding chr3-417 chr3 30448973 30449183 + 24.0 0.000 Intergenic Intergenic -69790 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr7-882 chr7 129948919 129949129 + 24.0 0.000 intron (NM_001202498, intron 1 of 6) intron (NM_001202498, intron 1 of 6) 3936 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr2-518 chr2 159797971 159798181 + 24.0 0.000 intron (NM_001198760, intron 33 of 37) CpG 132 NM_014880 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr17-931 chr17 78059099 78059309 + 24.0 0.000 intron (NM_018996, intron 4 of 20) intron (NM_018996, intron 4 of 20) 52595 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr4-306 chr4 102345406 102345616 + 24.0 0.000 promoter-TSS (NM_001135147) promoter-TSS (NM_001135147) -29 NM_001135146 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr12-497 chr12 774360 774570 + 24.0 0.000 intron (NM_001184985, intron 1 of 27) intron (NM_001184985, intron 1 of 27) 21542 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr2-762 chr2 220199022 220199232 + 24.0 0.000 Intergenic Intergenic -292562 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr1-910 chr1 9652206 9652416 + 24.0 0.000 TTS (NR_027045) TTS (NR_027045) 580 NM_005026 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr11-829 chr11 68380396 68380606 + 24.0 0.000 intron (NM_002335, intron 5 of 22) intron (NM_002335, intron 5 of 22) 67910 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr8-326 chr8 130324123 130324333 + 24.0 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -27695 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr6-389 chr6 57046609 57046819 + 23.9 0.000 promoter-TSS (NM_001286276) promoter-TSS (NM_001286276) 21 NM_020931 57691 Hs.709521 NM_020931 ENSG00000168116 KIAA1586 - KIAA1586 protein-coding chr4-241 chr4 98143456 98143666 + 23.9 0.000 promoter-TSS (NM_174952) promoter-TSS (NM_174952) -85 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr16-757 chr16 57892052 57892262 + 23.9 0.000 intron (NM_001297, intron 31 of 32) Tigger17a|DNA|TcMar-Tigger 78971 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr2-910 chr2 178523176 178523386 + 23.9 0.000 promoter-TSS (NR_038271) promoter-TSS (NR_038271) 90 NR_038271 100506866 Hs.710694 NR_038271 ENSG00000237298 TTN-AS1 - TTN antisense RNA 1 ncRNA chr7-539 chr7 99860385 99860595 + 23.9 0.000 intron (NR_103869, intron 11 of 13) intron (NR_103869, intron 11 of 13) 16543 NM_001005276 81392 Hs.647523 NM_001005276 ENSG00000244623 OR2AE1 OR2AE2 olfactory receptor family 2 subfamily AE member 1 protein-coding chr20-341 chr20 34713440 34713650 + 23.9 0.000 TTS (NM_001329430) TTS (NM_001329430) 8826 NM_001329431 58476 Hs.516994 NM_021202 ENSG00000078804 TP53INP2 C20orf110|DOR|PIG-U|PIGU|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding chr1-1257 chr1 238485254 238485464 + 23.9 0.000 intron (NR_015407, intron 1 of 1) MER61-int|LTR|ERV1 658 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr15-563 chr15 73634272 73634482 + 23.9 0.000 promoter-TSS (NM_001161363) promoter-TSS (NM_001161363) -988 NM_001161364 27020 Hs.744867 NM_012428 ENSG00000156642 NPTN GP55|GP65|SDFR1|SDR1|np55|np65 neuroplastin protein-coding chr2-574 chr2 234203271 234203481 + 23.9 0.000 Intergenic Intergenic 152674 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr3-528 chr3 183636640 183636850 + 23.9 0.000 intron (NM_001349424, intron 2 of 7) CpG-20502 1122 NM_001349414 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding chr2-962 chr2 200765609 200765819 + 23.9 0.000 intron (NR_135012, intron 21 of 30) MER21C|LTR|ERVL -30537 NR_037886 100507140 Hs.382116 NR_037886 ENSG00000237166 LINC01792 - long intergenic non-protein coding RNA 1792 ncRNA chr4-378 chr4 138875929 138876139 + 23.9 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 136612 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr8-401 chr8 140862276 140862486 + 23.9 0.000 intron (NR_148037, intron 6 of 34) intron (NR_148037, intron 6 of 34) -129728 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr16-490 chr16 81007547 81007757 + 23.9 0.000 promoter-TSS (NM_001351968) promoter-TSS (NM_001351968) -733 NR_147838 56942 Hs.55028 NM_020188 ENSG00000103121 CMC2 2310061C15Rik|C16orf61|DC13 C-X9-C motif containing 2 protein-coding chr2-600 chr2 43707396 43707606 + 23.9 0.000 exon (NM_172069, exon 11 of 30) exon (NM_172069, exon 11 of 30) -31072 NM_001101330 728819 NM_001101330 ENSG00000223658 C1GALT1C1L - C1GALT1 specific chaperone 1 like protein-coding chr2-1200 chr2 160224125 160224335 + 23.9 0.000 Intergenic Intergenic -23917 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr8-231 chr8 22556394 22556604 + 23.9 0.000 intron (NM_005775, intron 3 of 20) intron (NM_005775, intron 3 of 20) 4572 NM_005775 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr22-722 chr22 31530594 31530804 + 23.9 0.000 intron (NM_001258325, intron 3 of 30) intron (NM_001258325, intron 3 of 30) 34163 NM_001258326 9814 Hs.62209 NM_014775 ENSG00000198089 SFI1 PISD|PPP1R139|hSfi1p SFI1 centrin binding protein protein-coding chr17-368 chr17 60600005 60600215 + 23.9 0.000 promoter-TSS (NM_003620) promoter-TSS (NM_003620) -73 NM_003620 8493 Hs.286073 NM_003620 ENSG00000170836 PPM1D IDDGIP|PP2C-DELTA|WIP1 protein phosphatase, Mg2+/Mn2+ dependent 1D protein-coding chr3-507 chr3 121545848 121546058 + 23.9 0.000 promoter-TSS (NM_199420) promoter-TSS (NM_199420) 35 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chr12-267 chr12 56635020 56635230 + 23.9 0.000 intron (NM_001351156, intron 1 of 30) CpG 1234 NM_013449 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr16-383 chr16 20900739 20900949 + 23.9 0.000 promoter-TSS (NM_173475) promoter-TSS (NM_173475) 73 NM_001128302 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr10-508 chr10 132421500 132421710 + 23.9 0.000 Intergenic Intergenic -23584 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr1-936 chr1 218735534 218735744 + 23.9 0.000 intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 182872 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chr15-317 chr15 65133760 65133970 + 23.9 0.000 promoter-TSS (NM_005707) promoter-TSS (NM_005707) -57 NM_005707 10081 Hs.458596 NM_005707 ENSG00000090470 PDCD7 ES18|HES18 programmed cell death 7 protein-coding chr3-351 chr3 123383085 123383295 + 23.9 0.000 intron (NM_183357, intron 1 of 20) intron (NM_183357, intron 1 of 20) 33152 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr15-128 chr15 56733427 56733637 + 23.9 0.000 5' UTR (NM_001288588, exon 1 of 22) 5' UTR (NM_001288588, exon 1 of 22) 554 NM_001002843 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding chr14-348 chr14 69263474 69263684 + 23.9 0.000 intron (NM_020692, intron 1 of 15) intron (NM_020692, intron 1 of 15) 3421 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr19-541 chr19 9847055 9847265 + 23.9 0.000 intron (NM_006221, intron 2 of 3) (CA)n|Simple_repeat|Simple_repeat 11015 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr17-694 chr17 69492451 69492661 + 23.9 0.000 intron (NM_002758, intron 1 of 11) MLT1D|LTR|ERVL-MaLR -7024 NR_145982 105371880 NR_145982 LOC105371880 - uncharacterized LOC105371880 ncRNA chr2-1198 chr2 150467451 150467661 + 23.9 0.000 TTS (NM_001254738) TTS (NM_001254738) 20139 NM_005168 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr6-452 chr6 105810575 105810785 + 23.9 0.000 Intergenic Intergenic -275656 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr17-724 chr17 19331283 19331493 + 23.9 0.000 intron (NM_014964, intron 9 of 10) intron (NM_014964, intron 9 of 10) 13186 NR_031591 100302256 NR_031591 ENSG00000221540 MIR1180 MIRN1180|hsa-mir-1180|mir-1180 microRNA 1180 ncRNA chr9-161 chr9 136992292 136992502 + 23.9 0.000 promoter-TSS (NM_001329678) promoter-TSS (NM_001329678) -25 NR_138076 286257 Hs.409582 NM_183241 ENSG00000148362 PAXX C9orf142|XLS PAXX non-homologous end joining factor protein-coding chr1-2617 chr1 92923768 92923978 + 23.9 0.000 intron (NM_001006605, intron 1 of 4) intron (NM_001006605, intron 1 of 4) 37589 NM_001006605 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr15-243 chr15 73897902 73898112 + 23.9 0.000 Intergenic Intergenic 24443 NM_153356 161514 Hs.124512 NM_153356 ENSG00000167139 TBC1D21 MgcRabGAP TBC1 domain family member 21 protein-coding chr5-279 chr5 5422180 5422390 + 23.9 0.000 promoter-TSS (NM_015325) promoter-TSS (NM_015325) -392 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr11-940 chr11 109946419 109946629 + 23.9 0.000 Intergenic Intergenic -146868 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr8-339 chr8 123658416 123658626 + 23.9 0.000 Intergenic Intergenic -4720 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr16-342 chr16 88265103 88265313 + 23.9 0.000 Intergenic Intergenic 70927 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr7-1050 chr7 126574834 126575044 + 23.9 0.000 intron (NM_001371085, intron 8 of 10) intron (NM_001371085, intron 8 of 10) 483245 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr18-240 chr18 12041659 12041869 + 23.9 0.000 Intergenic MER31-int|LTR|ERV1 -52079 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr20-226 chr20 50503079 50503289 + 23.9 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -7137 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr14-293 chr14 45084094 45084304 + 23.9 0.000 promoter-TSS (NM_017922) promoter-TSS (NM_017922) 83 NM_017922 55015 Hs.274337 NM_017922 ENSG00000185246 PRPF39 - pre-mRNA processing factor 39 protein-coding chr7-1026 chr7 42843188 42843398 + 23.9 0.000 Intergenic Intergenic 68550 NM_001363436 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr1-783 chr1 20733047 20733257 + 23.9 0.000 promoter-TSS (NM_001103160) promoter-TSS (NM_001103160) -449 NM_001103160 400745 Hs.591522 NM_001103160 ENSG00000189410 SH2D5 - SH2 domain containing 5 protein-coding chr14-130 chr14 103075709 103075919 + 23.9 0.000 Intergenic (CCGCT)n|Simple_repeat|Simple_repeat -8396 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chr3-323 chr3 172520590 172520800 + 23.9 0.000 intron (NM_001190943, intron 1 of 1) intron (NM_001190943, intron 1 of 1) 2735 NM_001190942 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL TNF superfamily member 10 protein-coding chr1-1045 chr1 59151110 59151320 + 23.9 0.000 Intergenic Intergenic -4408 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr4-182 chr4 183398688 183398898 + 23.9 0.000 Intergenic CpG -45843 NM_001317343 55602 Hs.592508 NM_017632 ENSG00000168564 CDKN2AIP CARF CDKN2A interacting protein protein-coding chr2-1279 chr2 88038416 88038626 + 23.9 0.000 intron (NM_001304526, intron 1 of 3) LTR80A|LTR|ERVL 17262 NM_001304526 51315 Hs.469254 NM_016618 ENSG00000172086 KRCC1 CHBP2 lysine rich coiled-coil 1 protein-coding chr13-125 chr13 60396176 60396386 + 23.9 0.000 promoter-TSS (NM_001146070) promoter-TSS (NM_001146070) -176 NM_030794 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr3-824 chr3 127799595 127799805 + 23.9 0.000 intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 23182 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr1-1775 chr1 22472674 22472884 + 23.9 0.000 intron (NM_001083621, intron 2 of 18) intron (NM_001083621, intron 2 of 18) 20928 NM_014870 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr7-930 chr7 7492630 7492840 + 23.9 0.000 intron (NM_001037763, intron 11 of 34) intron (NM_001037763, intron 11 of 34) 43138 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding chr7-716 chr7 130887283 130887493 + 23.9 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) -9849 NR_029517 407024 NR_029517 ENSG00000283797 MIR29B1 MIRN29B1|miR-29b|miRNA29B1|mir-29b-1 microRNA 29b-1 ncRNA chr12-609 chr12 71839538 71839748 + 23.9 0.000 promoter-TSS (NM_001146213) promoter-TSS (NM_001146213) -116 NM_001146213 64786 Hs.284630 NM_022771 ENSG00000121749 TBC1D15 RAB7-GAP TBC1 domain family member 15 protein-coding chr20-335 chr20 1900527 1900737 + 23.9 0.000 intron (NM_001040023, intron 1 of 7) intron (NM_001040023, intron 1 of 7) 5225 NM_001040023 140885 Hs.581021 NM_080792 ENSG00000198053 SIRPA BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP signal regulatory protein alpha protein-coding chr9-232 chr9 97697323 97697533 + 23.9 0.000 promoter-TSS (NR_149091) promoter-TSS (NR_149091) -19 NM_000380 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr2-1147 chr2 101124865 101125075 + 23.9 0.000 intron (NM_001102426, intron 1 of 19) intron (NM_001102426, intron 1 of 19) 26477 NR_138475 11138 Hs.442657 NM_007063 ENSG00000204634 TBC1D8 AD3|GRAMD8|HBLP1|TBC1D8A|VRP TBC1 domain family member 8 protein-coding chr7-776 chr7 76054535 76054745 + 23.9 0.000 intron (NM_001282404, intron 1 of 7) intron (NM_001282404, intron 1 of 7) 6534 NM_001282404 4191 Hs.520967 NM_005918 ENSG00000146701 MDH2 EIEE51|M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2 protein-coding chr16-812 chr16 58684719 58684929 + 23.9 0.000 promoter-TSS (NM_018231) promoter-TSS (NM_018231) -54 NM_018231 55238 Hs.10499 NM_018231 ENSG00000103042 SLC38A7 SNAT7 solute carrier family 38 member 7 protein-coding chr14-152 chr14 74019149 74019359 + 23.8 0.000 promoter-TSS (NM_001321985) promoter-TSS (NM_001321985) 34 NM_001321988 957 Hs.655070 NM_001249 ENSG00000187097 ENTPD5 CD39L4|NTPDase-5|PCPH ectonucleoside triphosphate diphosphohydrolase 5 (inactive) protein-coding chr15-286 chr15 78566320 78566530 + 23.8 0.000 intron (NM_001307945, intron 1 of 5) intron (NM_001307945, intron 1 of 5) 905 NM_001307945 1138 Hs.1614 NM_000745 ENSG00000169684 CHRNA5 LNCR2 cholinergic receptor nicotinic alpha 5 subunit protein-coding chr2-736 chr2 135775441 135775651 + 23.8 0.000 intron (NM_014607, intron 9 of 12) L1MB7|LINE|L1 -32902 NR_163478 107985946 Hs.591242 NM_001365239 LOC107985946 - uncharacterized LOC107985946 ncRNA chr21-113 chr21 44962605 44962815 + 23.8 0.000 intron (NM_001316987, intron 3 of 4) L1ME2z|LINE|L1 22681 NM_058190 85395 Hs.410830 NM_058190 ENSG00000160256 FAM207A C21orf70|PRED56 family with sequence similarity 207 member A protein-coding chr19-623 chr19 13055366 13055576 + 23.8 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 30692 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr17-971 chr17 2084437 2084647 + 23.8 0.000 intron (NM_001256827, intron 7 of 11) intron (NM_001256827, intron 7 of 11) 4219 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr12-417 chr12 69360034 69360244 + 23.8 0.000 intron (NM_001300950, intron 1 of 4) CpG 396 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding chr7-872 chr7 99699930 99700140 + 23.8 0.000 intron (NM_001256497, intron 13 of 14) intron (NM_001256497, intron 13 of 14) -20039 NR_033807 1577 Hs.571258 NM_000777 ENSG00000106258 CYP3A5 CP35|CYPIIIA5|P450PCN3|PCN3 cytochrome P450 family 3 subfamily A member 5 protein-coding chr7-580 chr7 100803577 100803787 + 23.8 0.000 intron (NM_004444, intron 16 of 16) intron (NM_004444, intron 16 of 16) -23187 NM_001363494 56996 Hs.521087 NM_020246 ENSG00000146828 SLC12A9 CCC6|CIP1|WO3.3|hCCC6 solute carrier family 12 member 9 protein-coding chr11-916 chr11 121687990 121688200 + 23.8 0.000 Intergenic Intergenic 235781 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr9-967 chr9 121271958 121272168 + 23.8 0.000 intron (NM_001353064, intron 2 of 19) intron (NM_001353064, intron 2 of 19) 2138 NM_001353062 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr1-1283 chr1 155888576 155888786 + 23.8 0.000 Intergenic Intergenic 22237 NM_001256821 6016 Hs.491234 NM_006912 ENSG00000143622 RIT1 NS8|RIBB|RIT|ROC1 Ras like without CAAX 1 protein-coding chr5-165 chr5 671747 671957 + 23.8 0.000 intron (NM_007030, intron 2 of 3) intron (NM_007030, intron 2 of 3) 21500 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr2-391 chr2 196799509 196799719 + 23.8 0.000 promoter-TSS (NM_001206774) promoter-TSS (NM_001206774) 69 NM_012086 9330 Hs.470996 NM_012086 ENSG00000119041 GTF3C3 TFIIIC102|TFIIICgamma|TFiiiC2-102 general transcription factor IIIC subunit 3 protein-coding chr14-248 chr14 100375500 100375710 + 23.8 0.000 promoter-TSS (NM_001350947) promoter-TSS (NM_001350947) -258 NM_213646 7453 Hs.497599 NM_004184 ENSG00000140105 WARS GAMMA-2|HMN9|IFI53|IFP53 tryptophanyl-tRNA synthetase protein-coding chr11-796 chr11 69660930 69661140 + 23.8 0.000 Intergenic Intergenic 14318 NM_153451 220064 Hs.667996 NM_153451 ENSG00000149716 LTO1 CIAB1|ORAOV1|TAOS1 LTO1 maturation factor of ABCE1 protein-coding chr6-324 chr6 90369145 90369355 + 23.8 0.000 Intergenic Intergenic 56508 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr4-407 chr4 128823164 128823374 + 23.8 0.000 intron (NM_001287443, intron 1 of 10) intron (NM_001287443, intron 1 of 10) 11425 NM_001287443 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr1-1104 chr1 201602926 201603136 + 23.8 0.000 Intergenic Intergenic -45291 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr1-420 chr1 94927042 94927252 + 23.8 0.000 promoter-TSS (NM_001286055) promoter-TSS (NM_001286055) -37 NM_001839 1266 Hs.483454 NM_001839 ENSG00000117519 CNN3 - calponin 3 protein-coding chr11-372 chr11 86069087 86069297 + 23.8 0.000 promoter-TSS (NM_007166) promoter-TSS (NM_007166) -108 NM_007166 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr1-1278 chr1 109162098 109162308 + 23.8 0.000 intron (NM_020775, intron 2 of 21) intron (NM_020775, intron 2 of 21) -24346 NM_001284353 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding chr22-322 chr22 26645299 26645509 + 23.8 0.000 Intergenic Intergenic -12078 NR_033321 440823 Hs.517502 NR_003491 ENSG00000225783 MIAT C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2|lncRNA-MIAT myocardial infarction associated transcript ncRNA chr7-1305 chr7 81285281 81285491 + 23.8 0.000 Intergenic L1PA16|LINE|L1 276433 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chrX-57 chrX 14873148 14873358 + 23.8 0.000 promoter-TSS (NM_001330241) promoter-TSS (NM_001330241) -168 NM_001330241 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr19-775 chr19 5979824 5980034 + 23.8 0.000 intron (NR_046376, intron 1 of 3) (TCCCT)n|Simple_repeat|Simple_repeat 1526 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA chr1-700 chr1 202034761 202034971 + 23.8 0.000 Intergenic Intergenic 24279 NM_001114309 1999 Hs.603657 NM_004433 ENSG00000163435 ELF3 EPR-1|ERT|ESE-1|ESX E74 like ETS transcription factor 3 protein-coding chr4-281 chr4 5635821 5636031 + 23.8 0.000 intron (NM_147127, intron 10 of 21) MIR3|SINE|MIR 72633 NM_147127 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr2-426 chr2 152717766 152717976 + 23.8 0.000 promoter-TSS (NM_001365597) promoter-TSS (NM_001365597) -22 NR_024526 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr4-553 chr4 47214017 47214227 + 23.8 0.000 intron (NM_000812, intron 4 of 8) intron (NM_000812, intron 4 of 8) 182555 NM_000812 2560 Hs.27283 NM_000812 ENSG00000163288 GABRB1 EIEE45 gamma-aminobutyric acid type A receptor beta1 subunit protein-coding chr10-169 chr10 119207314 119207524 + 23.8 0.000 promoter-TSS (NM_005308) promoter-TSS (NM_005308) -152 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr1-550 chr1 12596144 12596354 + 23.8 0.000 5' UTR (NM_001324370, exon 1 of 6) 5' UTR (NM_001324370, exon 1 of 6) 364 NM_001324370 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding chr1-983 chr1 156709879 156710089 + 23.8 0.000 Intergenic Intergenic -4168 NM_001199723 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding chr10-479 chr10 93992005 93992215 + 23.8 0.000 Intergenic Intergenic -1821 NM_016341 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr8-594 chr8 28917482 28917692 + 23.8 0.000 intron (NM_024567, intron 2 of 10) L1MD|LINE|L1 26273 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr9-410 chr9 97877359 97877569 + 23.8 0.000 Intergenic MamRTE1|LINE|RTE-BovB 24238 NM_004473 2304 NM_004473 ENSG00000178919 FOXE1 FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2 forkhead box E1 protein-coding chr16-448 chr16 58495025 58495235 + 23.8 0.000 intron (NM_020465, intron 3 of 15) intron (NM_020465, intron 3 of 15) -5013 NR_040072 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr17-1355 chr17 59435249 59435459 + 23.8 0.000 intron (NR_110813, intron 2 of 2) MER5A1|DNA|hAT-Charlie 69271 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chr20-280 chr20 31551689 31551899 + 23.8 0.000 intron (NM_178580, intron 7 of 12) intron (NM_178580, intron 7 of 12) 21469 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr9-587 chr9 21070222 21070432 + 23.8 0.000 Intergenic Intergenic 7615 NM_002176 3456 Hs.93177 NM_002176 ENSG00000171855 IFNB1 IFB|IFF|IFN-beta|IFNB interferon beta 1 protein-coding chr3-477 chr3 11514451 11514661 + 23.8 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 54242 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr12-1031 chr12 53484779 53484989 + 23.8 0.000 intron (NM_006301, intron 7 of 14) MIRb|SINE|MIR 14574 NM_006301 7786 Hs.713539 NM_006301 ENSG00000139625 MAP3K12 DLK|MEKK12|MUK|ZPK|ZPKP1 mitogen-activated protein kinase kinase kinase 12 protein-coding chr12-683 chr12 69897923 69898133 + 23.8 0.000 intron (NM_182530, intron 10 of 24) intron (NM_182530, intron 10 of 24) 72801 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr19-620 chr19 3435036 3435246 + 23.8 0.000 exon (NM_205843, exon 6 of 11) exon (NM_205843, exon 6 of 11) 45384 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr19-861 chr19 39532730 39532940 + 23.8 0.000 promoter-TSS (NM_152361) promoter-TSS (NM_152361) 17 NM_152361 126272 Hs.135181 NM_152361 ENSG00000176401 EID2B EID-2B|EID-3 EP300 interacting inhibitor of differentiation 2B protein-coding chr2-647 chr2 227466362 227466572 + 23.8 0.000 Intergenic Intergenic -5665 NR_049888 100847081 NR_049888 ENSG00000284092 MIR5703 mir-5703 microRNA 5703 ncRNA chr22-249 chr22 31102599 31102809 + 23.8 0.000 intron (NM_001207018, intron 19 of 19) intron (NM_001207018, intron 19 of 19) 4864 NM_080430 140606 Hs.55940 NM_080430 ENSG00000198832 SELENOM SELM|SEPM selenoprotein M protein-coding chr1-2660 chr1 180277616 180277826 + 23.8 0.000 3' UTR (NM_033343, exon 6 of 6) 3' UTR (NM_033343, exon 6 of 6) -3040 NR_037642 100527964 Hs.496545 NR_037642 ENSG00000230124 LHX4-AS1 - LHX4 antisense RNA 1 ncRNA chr1-678 chr1 150532468 150532678 + 23.8 0.000 Intergenic Intergenic -16796 NM_001288608 54507 Hs.516243 NM_019032 ENSG00000143382 ADAMTSL4 ADAMTSL-4|ECTOL2|TSRC1 ADAMTS like 4 protein-coding chr20-306 chr20 50561622 50561832 + 23.8 0.000 intron (NM_002827, intron 2 of 9) Tigger15a|DNA|TcMar-Tigger -24059 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr8-485 chr8 133033305 133033515 + 23.8 0.000 intron (NM_003235, intron 41 of 47) intron (NM_003235, intron 41 of 47) 13171 NR_107002 102466865 NR_107002 ENSG00000276961 MIR7848 hsa-mir-7848 microRNA 7848 ncRNA chr6-360 chr6 130602347 130602557 + 23.8 0.000 Intergenic Intergenic 165335 NM_052913 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr6-308 chr6 167855945 167856155 + 23.8 0.000 intron (NM_001291964, intron 1 of 32) MER44B|DNA|TcMar-Tigger 28415 NM_001291964 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding chr2-403 chr2 235493701 235493911 + 23.8 0.000 promoter-TSS (NM_001244888) promoter-TSS (NM_001244888) -237 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr1-548 chr1 247361124 247361334 + 23.8 0.000 Intergenic Intergenic -29362 NM_001329733 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr5-367 chr5 172765355 172765565 + 23.8 0.000 Intergenic Intergenic 5735 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr13-140 chr13 94656865 94657075 + 23.8 0.000 Intergenic Tigger4|DNA|TcMar-Tigger 51516 NR_120417 101927248 NR_120417 LOC101927248 - uncharacterized LOC101927248 ncRNA chr2-1120 chr2 209496013 209496223 + 23.8 0.000 intron (NM_001039538, intron 1 of 14) intron (NM_001039538, intron 1 of 14) 72071 NM_001039538 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr2-1533 chr2 160562034 160562244 + 23.8 0.000 Intergenic Tigger20a|DNA|TcMar-Tigger -68332 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr6-188 chr6 13814268 13814478 + 23.8 0.000 exon (NM_001031713, exon 1 of 9) exon (NM_001031713, exon 1 of 9) 187 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr5-696 chr5 34244374 34244584 + 23.8 0.000 intron (NR_146599, intron 1 of 11) LTR12E|LTR|ERV1 245 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr11-797 chr11 72447038 72447248 + 23.8 0.000 Intergenic Intergenic -12459 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr20-261 chr20 36484012 36484222 + 23.8 0.000 intron (NM_183006, intron 1 of 6) MIRc|SINE|MIR 22322 NM_183006 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr21-81 chr21 46056589 46056799 + 23.8 0.000 Intergenic Intergenic -41418 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr2-646 chr2 188291610 188291820 + 23.8 0.000 promoter-TSS (NM_001252669) promoter-TSS (NM_001252669) 46 NM_001252669 51454 Hs.470887 NM_016315 ENSG00000144366 GULP1 CED-6|CED6|GULP GULP PTB domain containing engulfment adaptor 1 protein-coding chr1-1619 chr1 118158988 118159198 + 23.8 0.000 intron (NM_206996, intron 1 of 48) intron (NM_206996, intron 1 of 48) 26135 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr15-571 chr15 95669133 95669343 + 23.8 0.000 Intergenic Intergenic 236145 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr6-995 chr6 12148465 12148675 + 23.8 0.000 intron (NM_002114, intron 7 of 8) MamRTE1|LINE|RTE-BovB 136258 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr11-484 chr11 46700604 46700814 + 23.8 0.000 promoter-TSS (NM_001184751) promoter-TSS (NM_001184751) -90 NM_004308 392 Hs.138860 NM_004308 ENSG00000175220 ARHGAP1 CDC42GAP|RHOGAP|RHOGAP1|p50rhoGAP Rho GTPase activating protein 1 protein-coding chr11-229 chr11 111602119 111602329 + 23.8 0.000 promoter-TSS (NM_015191) promoter-TSS (NM_015191) -225 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr5-497 chr5 156475953 156476163 + 23.8 0.000 intron (NM_001128209, intron 2 of 7) intron (NM_001128209, intron 2 of 7) 148894 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr8-595 chr8 42893820 42894030 + 23.8 0.000 intron (NM_030954, intron 1 of 6) intron (NM_030954, intron 1 of 6) 2350 NR_039679 100616115 NR_039679 ENSG00000284062 MIR4469 mir-4469 microRNA 4469 ncRNA chr7-251 chr7 66740579 66740789 + 23.8 0.000 promoter-TSS (NM_001367742) promoter-TSS (NM_001367742) -49 NM_001367753 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr12-701 chr12 51172334 51172544 + 23.8 0.000 5' UTR (NM_001173452, exon 1 of 15) 5' UTR (NM_001173452, exon 1 of 15) 696 NM_001173452 7024 Hs.48849 NM_005653 ENSG00000135457 TFCP2 LBP1C|LSF|LSF1D|SEF|TFCP2C transcription factor CP2 protein-coding chr6-190 chr6 36680308 36680518 + 23.8 0.000 intron (NM_001220778, intron 1 of 2) CpG 1699 NM_000389 1026 Hs.370771 NM_000389 ENSG00000124762 CDKN1A CAP20|CDKN1|CIP1|MDA-6|P21|SDI1|WAF1|p21CIP1 cyclin dependent kinase inhibitor 1A protein-coding chr10-503 chr10 103554945 103555155 + 23.8 0.000 intron (NM_004210, intron 1 of 5) intron (NM_004210, intron 1 of 5) -37608 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr11-928 chr11 34570623 34570833 + 23.8 0.000 Intergenic Intergenic -50365 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr13-195 chr13 76383698 76383908 + 23.8 0.000 Intergenic Intergenic -448671 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr11-1156 chr11 13118226 13118436 + 23.8 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 109015 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr13-74 chr13 21140243 21140453 + 23.8 0.000 promoter-TSS (NM_005870) promoter-TSS (NM_005870) -166 NM_005870 10284 Hs.524899 NM_005870 ENSG00000150459 SAP18 2HOR0202|SAP18P Sin3A associated protein 18 protein-coding chrX-72 chrX 130165992 130166202 + 23.8 0.000 promoter-TSS (NM_004208) promoter-TSS (NM_004208) -210 NM_001130847 9131 Hs.424932 NM_004208 ENSG00000156709 AIFM1 AIF|CMT2D|CMTX4|COWCK|COXPD6|DFNX5|NADMR|NAMSD|PDCD8 apoptosis inducing factor mitochondria associated 1 protein-coding chr2-550 chr2 127526397 127526607 + 23.8 0.000 promoter-TSS (NM_017969) promoter-TSS (NM_017969) -13 NM_017969 55677 Hs.469879 NM_017969 ENSG00000163166 IWS1 - interacts with SUPT6H, CTD assembly factor 1 protein-coding chr9-667 chr9 77752559 77752769 + 23.8 0.000 intron (NM_002072, intron 5 of 6) intron (NM_002072, intron 5 of 6) -104342 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr2-502 chr2 127811153 127811363 + 23.8 0.000 promoter-TSS (NM_018383) promoter-TSS (NM_018383) -71 NM_001006622 55339 Hs.554831 NM_018383 ENSG00000136709 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding chr2-869 chr2 234444719 234444929 + 23.8 0.000 intron (NR_146988, intron 2 of 2) intron (NR_146988, intron 2 of 2) 9771 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr12-610 chr12 79127359 79127569 + 23.8 0.000 intron (NM_005639, intron 3 of 10) MIR|SINE|MIR 81772 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr13-224 chr13 29957290 29957500 + 23.8 0.000 Intergenic Intergenic 20864 NR_033889 440131 Hs.132371 NM_001010918 LINC00544 - long intergenic non-protein coding RNA 544 ncRNA chr20-190 chr20 62703666 62703876 + 23.8 0.000 Intergenic Intergenic -5065 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr2-1006 chr2 224973349 224973559 + 23.8 0.000 intron (NM_014689, intron 1 of 55) MLT1D|LTR|ERVL-MaLR 8973 NM_001363762 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr7-407 chr7 23299271 23299481 + 23.8 0.000 promoter-TSS (NM_138446) promoter-TSS (NM_138446) 37 NM_138446 115416 Hs.87385 NM_138446 ENSG00000156928 MALSU1 C7orf30|mtRsfA mitochondrial assembly of ribosomal large subunit 1 protein-coding chr19-869 chr19 2016095 2016305 + 23.8 0.000 promoter-TSS (NM_017797) promoter-TSS (NM_017797) -486 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr16-391 chr16 77298812 77299022 + 23.8 0.000 intron (NM_199355, intron 17 of 22) intron (NM_199355, intron 17 of 22) 99509 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding chr6-269 chr6 26659625 26659835 + 23.8 0.000 promoter-TSS (NM_001242799) promoter-TSS (NM_001242799) 16 NM_024639 79692 Hs.126280 NM_024639 ENSG00000181315 ZNF322 HCG12|ZNF322A|ZNF388|ZNF489 zinc finger protein 322 protein-coding chr1-990 chr1 207805836 207806046 + 23.8 0.000 intron (NR_135299, intron 5 of 5) intron (NR_135299, intron 5 of 5) -3418 NR_029518 407025 NR_029518 ENSG00000284203 MIR29B2 MIRN29B2 microRNA 29b-2 ncRNA chr11-595 chr11 121293140 121293350 + 23.8 0.000 intron (NM_001024956, intron 1 of 4) intron (NM_001024956, intron 1 of 4) 377 NM_001024956 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chrX-193 chrX 129577588 129577798 + 23.7 0.000 intron (NM_001587, intron 18 of 22) intron (NM_001587, intron 18 of 22) 37434 NM_001318784 4952 Hs.126357 NM_000276 ENSG00000122126 OCRL INPP5F|LOCR|NPHL2|OCRL-1|OCRL1 OCRL inositol polyphosphate-5-phosphatase protein-coding chr11-662 chr11 19117079 19117289 + 23.7 0.000 promoter-TSS (NM_001001483) promoter-TSS (NM_001001483) 16 NM_019028 54503 Hs.188569 NM_019028 ENSG00000177054 ZDHHC13 HIP14L|HIP3RP zinc finger DHHC-type containing 13 protein-coding chr3-778 chr3 40120901 40121111 + 23.7 0.000 intron (NM_001284426, intron 1 of 14) intron (NM_001284426, intron 1 of 14) 20995 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr14-450 chr14 83521094 83521304 + 23.7 0.000 Intergenic Intergenic 878567 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr1-2615 chr1 92031696 92031906 + 23.7 0.000 intron (NM_173567, intron 1 of 6) intron (NM_173567, intron 1 of 6) 1816 NM_173567 253152 Hs.201555 NM_173567 ENSG00000172031 EPHX4 ABHD7|EH4|EPHXRP epoxide hydrolase 4 protein-coding chr1-812 chr1 45550855 45551065 + 23.7 0.000 5' UTR (NM_006066, exon 1 of 10) 5' UTR (NM_006066, exon 1 of 10) 134 NM_153326 10327 Hs.474584 NM_006066 ENSG00000117448 AKR1A1 ALDR1|ALR|ARM|DD3|HEL-S-6 aldo-keto reductase family 1 member A1 protein-coding chr1-1160 chr1 53512401 53512611 + 23.7 0.000 intron (NM_147193, intron 7 of 9) intron (NM_147193, intron 7 of 9) 53107 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr15-438 chr15 41490417 41490627 + 23.7 0.000 Intergenic Intergenic -3352 NM_002220 3706 Hs.2722 NM_002220 ENSG00000137825 ITPKA IP3-3KA|IP3KA inositol-trisphosphate 3-kinase A protein-coding chr10-399 chr10 133259446 133259656 + 23.7 0.000 Intergenic Intergenic -11666 NR_108078 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG - MIR202 host gene ncRNA chr7-437 chr7 130482001 130482211 + 23.7 0.000 Intergenic Intergenic -4069 NM_177524 4232 Hs.270978 NM_002402 ENSG00000106484 MEST PEG1 mesoderm specific transcript protein-coding chr8-273 chr8 93916834 93917044 + 23.7 0.000 promoter-TSS (NM_001161780) promoter-TSS (NM_001161780) -8 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr16-494 chr16 88091724 88091934 + 23.7 0.000 Intergenic Intergenic 9156 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr2-952 chr2 31336036 31336246 + 23.7 0.000 intron (NM_000379, intron 35 of 35) intron (NM_000379, intron 35 of 35) 78601 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr9-449 chr9 35096479 35096689 + 23.7 0.000 promoter-TSS (NM_152850) promoter-TSS (NM_152850) 7 NM_032634 84720 Hs.522099 NM_032634 ENSG00000165282 PIGO HPMRS2 phosphatidylinositol glycan anchor biosynthesis class O protein-coding chr12-658 chr12 77122317 77122527 + 23.7 0.000 Intergenic MER44C|DNA|TcMar-Tigger -56853 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr4-463 chr4 184453432 184453642 + 23.7 0.000 intron (NM_002199, intron 1 of 8) intron (NM_002199, intron 1 of 8) 21013 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr3-253 chr3 63912020 63912230 + 23.7 0.000 promoter-TSS (NR_148359) promoter-TSS (NR_148359) -353 NR_148359 100861563 NR_148359 ENSG00000280620 SCAANT1 ATXN7-AS1 SCA7/ATXN7 antisense RNA 1 ncRNA chr6-331 chr6 18362168 18362378 + 23.7 0.000 Intergenic Intergenic -25077 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr10-873 chr10 31623129 31623339 + 23.7 0.000 Intergenic Intergenic -223479 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr20-171 chr20 33663207 33663417 + 23.7 0.000 intron (NM_080825, intron 1 of 1) intron (NM_080825, intron 1 of 1) 985 NM_080825 128864 Hs.324104 NM_080825 ENSG00000149609 C20orf144 dJ63M2.6 chromosome 20 open reading frame 144 protein-coding chr12-471 chr12 31403215 31403425 + 23.7 0.000 intron (NM_144973, intron 14 of 20) intron (NM_144973, intron 14 of 20) -34019 NR_146469 101929027 Hs.266041 NR_146469 ENSG00000256232 LINC02387 - long intergenic non-protein coding RNA 2387 ncRNA chr3-392 chr3 11272153 11272363 + 23.7 0.000 promoter-TSS (NM_006395) promoter-TSS (NM_006395) -139 NM_001349238 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr16-306 chr16 57447340 57447550 + 23.7 0.000 promoter-TSS (NM_001308347) promoter-TSS (NM_001308347) -34 NM_020312 57017 Hs.513632 NM_020312 ENSG00000088682 COQ9 C16orf49|COQ10D5 coenzyme Q9 protein-coding chr9-235 chr9 136546093 136546303 + 23.7 0.000 promoter-TSS (NM_017617) promoter-TSS (NM_017617) 61 NR_039821 100616301 NR_039821 ENSG00000265181 MIR4674 - microRNA 4674 ncRNA chr1-1200 chr1 110394060 110394270 + 23.7 0.000 Intergenic MER68|LTR|ERVL -3083 NM_001201548 9122 Hs.351306 NM_004696 ENSG00000168679 SLC16A4 MCT4|MCT5 solute carrier family 16 member 4 protein-coding chr1-1232 chr1 55429226 55429436 + 23.7 0.000 Intergenic Intergenic 203690 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr5-747 chr5 17235807 17236017 + 23.7 0.000 intron (NM_006317, intron 1 of 1) intron (NM_006317, intron 1 of 1) 18281 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr1-1093 chr1 67618651 67618861 + 23.7 0.000 Intergenic Intergenic -66445 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr9-557 chr9 13942796 13943006 + 23.7 0.000 intron (NR_038194, intron 1 of 2) MER44B|DNA|TcMar-Tigger 14930 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr8-403 chr8 22430260 22430470 + 23.7 0.000 intron (NM_001135154, intron 8 of 8) L2a|LINE|L2 -10605 NM_005605 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr8-398 chr8 129552008 129552218 + 23.7 0.000 intron (NR_130917, intron 1 of 3) intron (NR_130917, intron 1 of 3) 22905 NR_130919 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr16-541 chr16 89700103 89700313 + 23.7 0.000 intron (NM_152339, intron 2 of 2) intron (NM_152339, intron 2 of 2) 1497 NM_152339 124044 Hs.374556 NM_152339 ENSG00000158792 SPATA2L C16orf76|tamo spermatogenesis associated 2 like protein-coding chr13-114 chr13 113626262 113626472 + 23.7 0.000 intron (NR_026580, intron 4 of 10) intron (NR_026580, intron 4 of 10) 31831 NM_000705 496 Hs.434202 NM_000705 ENSG00000186009 ATP4B ATP6B ATPase H+/K+ transporting subunit beta protein-coding chr1-900 chr1 205298489 205298699 + 23.7 0.000 Intergenic Intergenic 23151 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr2-594 chr2 234165608 234165818 + 23.7 0.000 Intergenic Intergenic 115011 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr10-446 chr10 87659782 87659992 + 23.7 0.000 promoter-TSS (NM_004670) promoter-TSS (NM_004670) 9 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr12-361 chr12 120469804 120470014 + 23.7 0.000 promoter-TSS (NM_003769) promoter-TSS (NM_003769) 67 NM_001037494 8655 Hs.5120 NM_003746 ENSG00000088986 DYNLL1 DLC1|DLC8|DNCL1|DNCLC1|LC8|LC8a|PIN|hdlc1 dynein light chain LC8-type 1 protein-coding chrX-98 chrX 129931990 129932200 + 23.7 0.000 Intergenic CpG 25931 NM_006649 10813 Hs.458598 NM_006649 ENSG00000156697 UTP14A NYCO16|SDCCAG16|Utp14|dJ537K23.3 UTP14A small subunit processome component protein-coding chr12-579 chr12 111410019 111410229 + 23.7 0.000 intron (NM_005475, intron 1 of 7) intron (NM_005475, intron 1 of 7) 4176 NM_005475 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr10-711 chr10 93440882 93441092 + 23.7 0.000 intron (NM_013451, intron 3 of 53) intron (NM_013451, intron 3 of 53) 41347 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr17-856 chr17 47205671 47205881 + 23.7 0.000 Intergenic Intergenic -3286 NM_001002841 4635 Hs.463300 NM_002476 ENSG00000198336 MYL4 ALC1|AMLC|GT1|PRO1957 myosin light chain 4 protein-coding chr17-927 chr17 59290791 59291001 + 23.7 0.000 Intergenic LTR5_Hs|LTR|ERVK -40759 NM_001005404 388403 Hs.463613 NM_001005404 ENSG00000175155 YPEL2 FKSG4 yippee like 2 protein-coding chr12-814 chr12 124621182 124621392 + 23.7 0.000 Intergenic Intergenic -53675 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr2-1034 chr2 36708239 36708449 + 23.7 0.000 intron (NM_001177969, intron 1 of 14) LTR89|LTR|ERVL? 11637 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr2-772 chr2 46331840 46332050 + 23.7 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 34538 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr5-932 chr5 10323818 10324028 + 23.7 0.000 Intergenic MIR|SINE|MIR -16021 NM_138809 134147 Hs.192586 NM_138809 ENSG00000164237 CMBL JS-1 carboxymethylenebutenolidase homolog protein-coding chr7-782 chr7 129702432 129702642 + 23.7 0.000 intron (NM_005011, intron 5 of 10) intron (NM_005011, intron 5 of 10) 67955 NR_029614 406958 NR_029614 ENSG00000207990 MIR182 MIRN182|miRNA182|mir-182 microRNA 182 ncRNA chr7-1020 chr7 22485372 22485582 + 23.7 0.000 intron (NM_001164460, intron 4 of 4) Tigger1|DNA|TcMar-Tigger 14805 NM_001164460 256227 Hs.729825 NM_207342 ENSG00000105889 STEAP1B - STEAP family member 1B protein-coding chr12-459 chr12 68933131 68933341 + 23.7 0.000 promoter-TSS (NM_001005502) promoter-TSS (NM_001005502) -37 NM_001005502 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr1-708 chr1 26966955 26967165 + 23.7 0.000 Intergenic Intergenic -6592 NM_152365 126695 Hs.188881 NM_152365 ENSG00000175707 KDF1 C1orf172|ECTD12 keratinocyte differentiation factor 1 protein-coding chr5-203 chr5 179023631 179023841 + 23.7 0.000 promoter-TSS (NM_001136116) promoter-TSS (NM_001136116) -68 NM_001353374 345462 Hs.445740 NM_001136116 ENSG00000234284 ZNF879 DKFZp686E2433 zinc finger protein 879 protein-coding chr1-1027 chr1 241847881 241848091 + 23.7 0.000 promoter-TSS (NM_006027) promoter-TSS (NM_006027) -205 NM_001319224 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr2-1150 chr2 108575523 108575733 + 23.7 0.000 intron (NM_001193483, intron 1 of 9) intron (NM_001193483, intron 1 of 9) -12678 NM_004987 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr6-650 chr6 17715182 17715392 + 23.7 0.000 Intergenic Intergenic 8244 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr10-797 chr10 125120175 125120385 + 23.7 0.000 intron (NM_001083914, intron 1 of 10) intron (NM_001083914, intron 1 of 10) 38497 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr11-1074 chr11 79087352 79087562 + 23.7 0.000 intron (NM_001098816, intron 4 of 33) intron (NM_001098816, intron 4 of 33) 314652 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr2-580 chr2 45128654 45128864 + 23.7 0.000 Intergenic MER91A|DNA|hAT-Tip100 -119307 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr7-587 chr7 139359654 139359864 + 23.7 0.000 promoter-TSS (NM_001270643) promoter-TSS (NM_001270643) -87 NM_001270643 51631 Hs.731488 NM_016019 ENSG00000146963 LUC7L2 CGI-59|CGI-74|LUC7B2 LUC7 like 2, pre-mRNA splicing factor protein-coding chr1-1205 chr1 156457270 156457480 + 23.7 0.000 Intergenic CpG -27827 NR_135262 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr11-1173 chr11 64038749 64038959 + 23.7 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) 53001 NM_017670 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr8-257 chr8 98085640 98085850 + 23.7 0.000 intron (NM_001170806, intron 1 of 1) intron (NM_001170806, intron 1 of 1) 21177 NM_173549 203111 Hs.171455 NM_173549 ENSG00000177459 ERICH5 C8orf47 glutamate rich 5 protein-coding chr14-195 chr14 77033260 77033470 + 23.7 0.000 Intergenic CpG -4657 NM_024496 64207 Hs.179260 NM_024496 ENSG00000119669 IRF2BPL C14orf4|EAP1|NEDAMSS interferon regulatory factor 2 binding protein like protein-coding chr16-489 chr16 30940228 30940438 + 23.7 0.000 intron (NM_001099784, intron 7 of 10) AluJo|SINE|Alu -8735 NM_152288 93129 Hs.745104 NM_152288 ENSG00000175938 ORAI3 TMEM142C ORAI calcium release-activated calcium modulator 3 protein-coding chr8-138 chr8 53521111 53521321 + 23.7 0.000 intron (NR_149032, intron 1 of 1) HERV3-int|LTR|ERV1 2749 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr22-480 chr22 36381488 36381698 + 23.7 0.000 intron (NM_002473, intron 1 of 40) L1ME4b|LINE|L1 6474 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr22-193 chr22 42649421 42649631 + 23.7 0.000 promoter-TSS (NM_000398) promoter-TSS (NM_000398) -134 NM_000398 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr6-203 chr6 139219222 139219432 + 23.7 0.000 Intergenic Intergenic 72671 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding chr19-749 chr19 49929883 49930093 + 23.7 0.000 promoter-TSS (NM_001258017) promoter-TSS (NM_001258017) -216 NM_001290746 22809 Hs.9754 NM_012068 ENSG00000169136 ATF5 ATFX|HMFN0395 activating transcription factor 5 protein-coding chr9-499 chr9 130607643 130607853 + 23.7 0.000 intron (NM_003934, intron 2 of 18) intron (NM_003934, intron 2 of 18) -18549 NR_106915 102465515 NR_106915 ENSG00000277713 MIR6856 hsa-mir-6856 microRNA 6856 ncRNA chr6-259 chr6 135851423 135851633 + 23.7 0.000 promoter-TSS (NM_018945) promoter-TSS (NM_018945) -173 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr12-269 chr12 124480550 124480760 + 23.7 0.000 intron (NM_001077261, intron 5 of 47) intron (NM_001077261, intron 5 of 47) 86957 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr6-729 chr6 144560199 144560409 + 23.7 0.000 intron (NM_007124, intron 49 of 73) intron (NM_007124, intron 49 of 73) 154649 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr1-1492 chr1 208988713 208988923 + 23.7 0.000 Intergenic Intergenic 16364 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr19-664 chr19 38361756 38361966 + 23.7 0.000 exon (NM_021185, exon 17 of 29) exon (NM_021185, exon 17 of 29) -12689 NM_002812 5714 Hs.78466 NM_002812 ENSG00000099341 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome 26S subunit, non-ATPase 8 protein-coding chr4-192 chr4 53476638 53476848 + 23.7 0.000 intron (NM_001126328, intron 9 of 10) intron (NM_001126328, intron 9 of 10) -23334 NR_046622 100873939 Hs.662372 NR_046622 ENSG00000250930 LNX1-AS1 - LNX1 antisense RNA 1 ncRNA chr15-179 chr15 43826907 43827117 + 23.7 0.000 promoter-TSS (NM_001167941) promoter-TSS (NM_001167941) 10 NM_001167941 79968 Hs.250154 NM_024908 ENSG00000092470 WDR76 CDW14 WD repeat domain 76 protein-coding chr16-393 chr16 85011547 85011757 + 23.7 0.000 promoter-TSS (NM_017740) promoter-TSS (NM_017740) -117 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr12-837 chr12 94546265 94546475 + 23.7 0.000 Intergenic Intergenic -15419 NR_049885 100847031 NR_049885 ENSG00000266099 MIR5700 - microRNA 5700 ncRNA chr15-418 chr15 43440882 43441092 + 23.7 0.000 intron (NM_001355001, intron 16 of 28) intron (NM_001355001, intron 16 of 28) 52169 NM_001141979 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding chrX-225 chrX 3244459 3244669 + 23.7 0.000 Intergenic Intergenic -27256 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 LINC01546 CXorf28 long intergenic non-protein coding RNA 1546 ncRNA chr22-252 chr22 20141761 20141971 + 23.7 0.000 intron (NM_001185024, intron 9 of 10) intron (NM_001185024, intron 9 of 10) 9189 NM_001365892 388849 Hs.454905 NM_001243537 ENSG00000234409 CCDC188 - coiled-coil domain containing 188 protein-coding chr3-480 chr3 48125146 48125356 + 23.7 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -36403 NM_002375 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr7-1018 chr7 6480129 6480339 + 23.7 0.000 intron (NM_001100603, intron 1 of 3) intron (NM_001100603, intron 1 of 3) 3918 NM_001100603 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr11-489 chr11 121292681 121292891 + 23.7 0.000 promoter-TSS (NM_006918) promoter-TSS (NM_006918) 15 NM_006918 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr11-486 chr11 64226038 64226248 + 23.7 0.000 promoter-TSS (NM_031472) promoter-TSS (NM_031472) 43 NM_031472 83707 Hs.326586 NM_031472 ENSG00000149743 TRPT1 - tRNA phosphotransferase 1 protein-coding chr15-290 chr15 41249845 41250055 + 23.7 0.000 intron (NM_007236, intron 2 of 6) intron (NM_007236, intron 2 of 6) 18682 NM_007236 11261 Hs.406234 NM_007236 ENSG00000187446 CHP1 CHP|SLC9A1BP|SPAX9|Sid470p|p22|p24 calcineurin like EF-hand protein 1 protein-coding chr16-487 chr16 20741796 20742006 + 23.7 0.000 promoter-TSS (NM_017736) promoter-TSS (NM_017736) -83 NM_001304550 55623 Hs.700004 NM_017736 ENSG00000066654 THUMPD1 Tan1 THUMP domain containing 1 protein-coding chr14-102 chr14 67241063 67241273 + 23.7 0.000 promoter-TSS (NM_022474) promoter-TSS (NM_022474) -267 NM_001256550 64398 Hs.652312 NM_022474 ENSG00000072415 MPP5 PALS1 membrane palmitoylated protein 5 protein-coding chr13-173 chr13 95921588 95921798 + 23.7 0.000 intron (NM_020121, intron 20 of 38) L1PA17|LINE|L1 131708 NM_020121 55757 Hs.193226 NM_020121 ENSG00000102595 UGGT2 HUGT2|UGCGL2|UGT2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding chr8-190 chr8 143886331 143886541 + 23.7 0.000 Intergenic Intergenic -7972 NM_031308 83481 Hs.200412 NM_031308 ENSG00000261150 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding chr10-708 chr10 92517162 92517372 + 23.7 0.000 intron (NR_136399, intron 4 of 25) intron (NR_136399, intron 4 of 25) -19506 NM_001322797 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr20-285 chr20 12925223 12925433 + 23.7 0.000 intron (NR_109868, intron 4 of 11) intron (NR_109868, intron 4 of 11) 11635 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr10-435 chr10 103967084 103967294 + 23.7 0.000 promoter-TSS (NM_014720) promoter-TSS (NM_014720) 49 NM_014720 9748 Hs.591922 NM_014720 ENSG00000065613 SLK LOSK|STK2|bA16H23.1|se20-9 STE20 like kinase protein-coding chr7-780 chr7 106216400 106216610 + 23.7 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 68478 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr5-1096 chr5 105817365 105817575 + 23.7 0.000 Intergenic Intergenic 717996 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr11-638 chr11 62480769 62480979 + 23.7 0.000 intron (NM_024060, intron 5 of 5) intron (NM_024060, intron 5 of 5) 61841 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr4-457 chr4 77695829 77696039 + 23.7 0.000 Intergenic Intergenic 123130 NM_001365007 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr10-547 chr10 44861359 44861569 + 23.7 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -49852 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr14-204 chr14 44897078 44897288 + 23.7 0.000 promoter-TSS (NM_001017923) promoter-TSS (NM_001017923) -92 NM_001017923 122525 Hs.82098 NM_001017923 ENSG00000179476 C14orf28 DRIP-1|DRIP1|c14_5270 chromosome 14 open reading frame 28 protein-coding chr1-1324 chr1 162541759 162541969 + 23.7 0.000 Intergenic Intergenic -19576 NM_001324117 6675 Hs.492859 NM_003115 ENSG00000117143 UAP1 AGX|AGX1|AGX2|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding chr17-1017 chr17 30340329 30340539 + 23.7 0.000 Intergenic Intergenic -6377 NM_001319942 388364 Hs.371005 NM_206832 ENSG00000182271 TMIGD1 TMIGD|UNQ9372 transmembrane and immunoglobulin domain containing 1 protein-coding chr11-445 chr11 113773564 113773774 + 23.7 0.000 promoter-TSS (NM_004724) promoter-TSS (NM_004724) 23 NM_004724 9183 Hs.503886 NM_004724 ENSG00000086827 ZW10 HZW10|KNTC1AP zw10 kinetochore protein protein-coding chr22-240 chr22 19691825 19692035 + 23.7 0.000 Intergenic Intergenic -22573 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding chr13-73 chr13 50124275 50124485 + 23.7 0.000 intron (NR_109974, intron 2 of 6) CpG 1161 NR_152566 8847 Hs.547964 NR_002612 ENSG00000231607 DLEU2 ALT1|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 ncRNA chr9-761 chr9 96859815 96860025 + 23.6 0.000 Intergenic L1M1|LINE|L1 -5406 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding chr16-465 chr16 50266453 50266663 + 23.6 0.000 promoter-TSS (NM_001286057) promoter-TSS (NM_001286057) 7 NM_001286057 113 Hs.513578 NM_001114 ENSG00000121281 ADCY7 AC7 adenylate cyclase 7 protein-coding chr17-678 chr17 42428374 42428584 + 23.6 0.000 Intergenic Intergenic -5223 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 CAVIN1 CAVIN|CGL4|FKSG13|PTRF|cavin-1 caveolae associated protein 1 protein-coding chr8-516 chr8 129857440 129857650 + 23.6 0.000 intron (NM_001353282, intron 4 of 10) L2b|LINE|L2 -70921 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding chr16-693 chr16 75372342 75372552 + 23.6 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) 61056 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr2-753 chr2 160209589 160209799 + 23.6 0.000 Intergenic Intergenic -9381 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr15-287 chr15 82809503 82809713 + 23.6 0.000 promoter-TSS (NM_001080435) promoter-TSS (NM_001080435) -20 NM_001080435 123720 Hs.377360 NM_001080435 ENSG00000156232 WHAMM WHAMM1|WHDC1 WASP homolog associated with actin, golgi membranes and microtubules protein-coding chr1-839 chr1 16624971 16625181 + 23.6 0.000 intron (NR_026752, intron 5 of 6) intron (NR_026752, intron 5 of 6) 5830 NR_026752 84809 Hs.631865 NR_026752 ENSG00000215908 CROCCP2 CROCCL1 CROCC pseudogene 2 pseudo chr2-532 chr2 157876319 157876529 + 23.6 0.000 promoter-TSS (NM_001347663) promoter-TSS (NM_001347663) -94 NM_001111067 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr17-984 chr17 40113344 40113554 + 23.6 0.000 Intergenic Intergenic -8522 NM_001365921 339287 Hs.532786 NM_001012241 ENSG00000188895 MSL1 MSL-1 MSL complex subunit 1 protein-coding chr2-1053 chr2 160293657 160293867 + 23.6 0.000 intron (NM_002897, intron 6 of 13) intron (NM_002897, intron 6 of 13) -21867 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chr13-174 chr13 111210579 111210789 + 23.6 0.000 intron (NM_001330597, intron 4 of 18) intron (NM_001330597, intron 4 of 18) 7624 NM_001320853 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr6-271 chr6 52567123 52567333 + 23.6 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 9832 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr13-293 chr13 84607782 84607992 + 23.6 0.000 Intergenic Intergenic -175767 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr3-583 chr3 15635980 15636190 + 23.6 0.000 intron (NM_001281725, intron 2 of 3) MER5B|DNA|hAT-Charlie 34116 NM_001281725 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr10-716 chr10 102803393 102803603 + 23.6 0.000 intron (NM_001083913, intron 2 of 3) intron (NM_001083913, intron 2 of 3) 27277 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr14-453 chr14 100278733 100278943 + 23.6 0.000 3' UTR (NM_003403, exon 5 of 5) 3' UTR (NM_003403, exon 5 of 5) 1481 NR_106822 102466730 NR_106822 ENSG00000283840 MIR6764 hsa-mir-6764 microRNA 6764 ncRNA chr19-655 chr19 56477925 56478135 + 23.6 0.000 promoter-TSS (NM_001321356) promoter-TSS (NM_001321356) -94 NR_036522 100128252 Hs.23133 NM_198879 ENSG00000166770 ZNF667-AS1 MORT ZNF667 antisense RNA 1 (head to head) ncRNA chr8-239 chr8 102924958 102925168 + 23.6 0.000 intron (NR_126339, intron 2 of 2) intron (NR_126339, intron 2 of 2) 60792 NR_126339 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA chr17-839 chr17 82205775 82205985 + 23.6 0.000 intron (NM_001367828, intron 1 of 16) intron (NM_001367828, intron 1 of 16) 6962 NM_001367828 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr1-841 chr1 42765995 42766205 + 23.6 0.000 intron (NM_001243246, intron 1 of 13) intron (NM_001243246, intron 1 of 13) 984 NM_001243246 64175 Hs.720014 NM_022356 ENSG00000117385 P3H1 GROS1|LEPRE1|OI8 prolyl 3-hydroxylase 1 protein-coding chr16-517 chr16 67185481 67185691 + 23.6 0.000 intron (NM_178516, intron 9 of 13) intron (NM_178516, intron 9 of 13) -1623 NM_001369686 653319 Hs.651201 NM_001040715 ENSG00000196123 KIAA0895L - KIAA0895 like protein-coding chr2-898 chr2 111227816 111228026 + 23.6 0.000 intron (NR_015395, intron 5 of 6) intron (NR_015395, intron 5 of 6) 93165 NR_039636 100616341 NR_039636 ENSG00000266139 MIR4435-2 mir-4435-2 microRNA 4435-2 ncRNA chr5-508 chr5 61451101 61451311 + 23.6 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 118948 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr15-541 chr15 101199842 101200052 + 23.6 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 52101 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr14-166 chr14 105248282 105248492 + 23.6 0.000 promoter-TSS (NM_145685) promoter-TSS (NM_145685) -146 NM_033271 90135 Hs.7367 NM_033271 ENSG00000184887 BTBD6 BDPL BTB domain containing 6 protein-coding chr3-527 chr3 172082398 172082608 + 23.6 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 41972 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr14-417 chr14 64438503 64438713 + 23.6 0.000 intron (NM_005956, intron 16 of 27) intron (NM_005956, intron 16 of 27) -26891 NM_004857 9495 Hs.656683 NM_004857 ENSG00000179841 AKAP5 AKAP75|AKAP79|H21 A-kinase anchoring protein 5 protein-coding chr17-1070 chr17 81599793 81600003 + 23.6 0.000 intron (NM_001369698, intron 9 of 16) intron (NM_001369698, intron 9 of 16) -22465 NR_130139 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr3-394 chr3 25790188 25790398 + 23.6 0.000 promoter-TSS (NM_001145294) promoter-TSS (NM_001145294) 203 NM_017897 54995 Hs.55781 NM_017897 ENSG00000151093 OXSM CEM1|FASN2D|KASI|KS 3-oxoacyl-ACP synthase, mitochondrial protein-coding chr4-538 chr4 56505314 56505524 + 23.6 0.000 promoter-TSS (NM_001363794) promoter-TSS (NM_001363794) 210 NM_206919 132946 Hs.444449 NM_206919 ENSG00000196503 ARL9 - ADP ribosylation factor like GTPase 9 protein-coding chr16-301 chr16 1971781 1971991 + 23.6 0.000 promoter-TSS (NM_006453) promoter-TSS (NM_006453) -167 NM_006453 10607 Hs.513267 NM_006453 ENSG00000183751 TBL3 SAZD|UTP13 transducin beta like 3 protein-coding chr2-793 chr2 217919940 217920150 + 23.6 0.000 intron (NM_001308023, intron 1 of 29) intron (NM_001308023, intron 1 of 29) 191 NM_001308022 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr9-523 chr9 136283581 136283791 + 23.6 0.000 intron (NR_111982, intron 9 of 9) intron (NR_111982, intron 9 of 9) 20408 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr11-892 chr11 1516688 1516898 + 23.6 0.000 Intergenic Intergenic -30014 NM_001172223 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr22-321 chr22 20569078 20569288 + 23.6 0.000 intron (NM_001293234, intron 8 of 16) (TG)n|Simple_repeat|Simple_repeat 61136 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr12-245 chr12 123711996 123712206 + 23.6 0.000 promoter-TSS (NM_012463) promoter-TSS (NM_012463) -252 NM_012463 23545 Hs.25786 NM_012463 ENSG00000185344 ATP6V0A2 A2|ARCL|ARCL2A|ATP6A2|ATP6N1D|J6B7|RTF|STV1|TJ6|TJ6M|TJ6S|VPH1|WSS ATPase H+ transporting V0 subunit a2 protein-coding chr16-1156 chr16 66886388 66886598 + 23.6 0.000 3' UTR (NM_001329933, exon 3 of 3) 3' UTR (NM_001329933, exon 3 of 3) 5978 NM_001329929 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr17-334 chr17 28842686 28842896 + 23.6 0.000 promoter-TSS (NM_001288640) promoter-TSS (NM_001288640) -1 NM_001288632 55731 Hs.564533 NM_018182 ENSG00000173065 FAM222B C17orf63 family with sequence similarity 222 member B protein-coding chr11-1484 chr11 122085273 122085483 + 23.6 0.000 intron (NR_137178, intron 1 of 4) intron (NR_137178, intron 1 of 4) 14466 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr20-200 chr20 45910840 45911050 + 23.6 0.000 promoter-TSS (NM_001242921) promoter-TSS (NM_001242921) 49 NM_001242921 5360 Hs.439312 NM_006227 ENSG00000100979 PLTP BPIFE|HDLCQ9 phospholipid transfer protein protein-coding chr5-1116 chr5 34487402 34487612 + 23.6 0.000 Intergenic L3|LINE|CR1 -168821 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr17-1258 chr17 39306995 39307205 + 23.6 0.000 intron (NM_001370209, intron 2 of 13) intron (NM_001370209, intron 2 of 13) 9700 NR_162098 113839521 NR_162098 MIR548BC - microRNA 548BC ncRNA chr7-503 chr7 90346485 90346695 + 23.6 0.000 promoter-TSS (NM_033107) promoter-TSS (NM_033107) -126 NM_033107 85865 Hs.593547 NM_033107 ENSG00000105793 GTPBP10 ObgH2|UG0751c10 GTP binding protein 10 protein-coding chr16-708 chr16 4679960 4680170 + 23.6 0.000 exon (NM_015246, exon 12 of 17) exon (NM_015246, exon 12 of 17) 8747 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr1-1314 chr1 101200589 101200799 + 23.6 0.000 Intergenic Intergenic 35834 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr7-307 chr7 143380134 143380344 + 23.6 0.000 intron (NR_161353, intron 1 of 1) (A)n|Simple_repeat|Simple_repeat 786 NR_161353 100507507 Hs.131743 NR_161353 LOC100507507 - uncharacterized LOC100507507 ncRNA chr2-884 chr2 43520015 43520225 + 23.6 0.000 intron (NM_001083953, intron 22 of 37) intron (NM_001083953, intron 22 of 37) 75854 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding chr14-280 chr14 58281514 58281724 + 23.6 0.000 intron (NR_029435, intron 2 of 3) intron (NR_029435, intron 2 of 3) -6414 NR_146595 55451 NR_146595 ENSG00000279636 LINC00216 C14orf107|NCRNA00216|PRO1617 long intergenic non-protein coding RNA 216 ncRNA chr5-591 chr5 138635434 138635644 + 23.6 0.000 Intergenic Intergenic -60138 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr3-424 chr3 3126656 3126866 + 23.6 0.000 promoter-TSS (NR_159942) promoter-TSS (NR_159942) -179 NR_159938 51095 Hs.732725 NM_016000 ENSG00000072756 TRNT1 CCA1|CGI-47|MtCCA|RPEM|SIFD tRNA nucleotidyl transferase 1 protein-coding chr20-319 chr20 44204198 44204408 + 23.6 0.000 intron (NM_016470, intron 2 of 3) intron (NM_016470, intron 2 of 3) 6468 NM_016470 51526 Hs.75798 NM_016470 ENSG00000132823 OSER1 C20orf111|HSPC207|Osr1|Perit1|dJ1183I21.1 oxidative stress responsive serine rich 1 protein-coding chr17-1186 chr17 61536398 61536608 + 23.6 0.000 Intergenic Tigger5b|DNA|TcMar-Tigger 54716 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr6-243 chr6 148342589 148342799 + 23.6 0.000 promoter-TSS (NM_015278) promoter-TSS (NM_015278) -144 NM_015278 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr1-655 chr1 206535274 206535484 + 23.6 0.000 intron (NM_182664, intron 1 of 4) intron (NM_182664, intron 1 of 4) -21785 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr14-613 chr14 72665296 72665506 + 23.6 0.000 intron (NM_001280544, intron 9 of 9) intron (NM_001280544, intron 9 of 9) 148581 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr2-653 chr2 27357115 27357325 + 23.6 0.000 promoter-TSS (NM_001521) promoter-TSS (NM_001521) -186 NM_001035521 2976 Hs.75782 NM_001521 ENSG00000115207 GTF3C2 TFIIIC-BETA|TFIIIC110 general transcription factor IIIC subunit 2 protein-coding chr17-272 chr17 41919018 41919228 + 23.6 0.000 promoter-TSS (NM_001303274) promoter-TSS (NM_001303274) -101 NM_001303274 47 Hs.387567 NM_001096 ENSG00000131473 ACLY ACL|ATPCL|CLATP ATP citrate lyase protein-coding chr2-893 chr2 95165677 95165887 + 23.6 0.000 promoter-TSS (NM_001291605) promoter-TSS (NM_001291605) -27 NM_001282398 7549 Hs.590916 NM_021088 ENSG00000275111 ZNF2 A1-5|ZNF661|Zfp661 zinc finger protein 2 protein-coding chr1-803 chr1 245771895 245772105 + 23.6 0.000 intron (NM_022743, intron 10 of 11) intron (NM_022743, intron 10 of 11) -537483 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr4-285 chr4 39502267 39502477 + 23.6 0.000 intron (NM_003359, intron 11 of 11) intron (NM_003359, intron 11 of 11) 22117 NR_026854 401127 Hs.383197 NR_026854 ENSG00000224097 LOC401127 - WD repeat domain 5 pseudogene pseudo chr2-675 chr2 1750802 1751012 + 23.6 0.000 Intergenic Intergenic -6392 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr8-132 chr8 144082535 144082745 + 23.6 0.000 promoter-TSS (NM_003801) promoter-TSS (NM_003801) 6 NM_003801 8733 Hs.627962 NM_003801 ENSG00000197858 GPAA1 GAA1|GPIBD15|hGAA1 glycosylphosphatidylinositol anchor attachment 1 protein-coding chr13-178 chr13 75633333 75633543 + 23.6 0.000 intron (NM_005358, intron 2 of 29) intron (NM_005358, intron 2 of 29) 2556 NR_120412 101927155 Hs.564550 NR_120410 ENSG00000261105 LMO7-AS1 UCHL3-AS1 LMO7 antisense RNA 1 ncRNA chr3-1033 chr3 157464352 157464562 + 23.6 0.000 intron (NM_024621, intron 3 of 13) intron (NM_024621, intron 3 of 13) 27607 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr21-105 chr21 25370341 25370551 + 23.6 0.000 Intergenic Intergenic 61255 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA chr6-1049 chr6 3978306 3978516 + 23.6 0.000 Intergenic Intergenic -42889 NR_146784 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr18-70 chr18 55833750 55833960 + 23.6 0.000 Intergenic Intergenic -52130 NR_145452 100132501 Hs.634003 NR_145452 LINC01415 TCONS_00026208 long intergenic non-protein coding RNA 1415 ncRNA chr14-366 chr14 23155204 23155414 + 23.6 0.000 promoter-TSS (NM_182728) promoter-TSS (NM_182728) 149 NR_049767 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr3-487 chr3 157175056 157175266 + 23.6 0.000 Intergenic CpG -14401 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr4-229 chr4 70902264 70902474 + 23.6 0.000 promoter-TSS (NM_001244767) promoter-TSS (NM_001244767) 0 NM_001244766 92597 Hs.691454 NM_173468 ENSG00000173542 MOB1B MATS2|MOB4A|MOBKL1A MOB kinase activator 1B protein-coding chr2-1427 chr2 192036040 192036250 + 23.6 0.000 intron (NM_001305134, intron 5 of 9) L2b|LINE|L2 158788 NM_016192 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr9-593 chr9 39464480 39464690 + 23.6 0.000 promoter-TSS (NR_003528) promoter-TSS (NR_003528) -59 NR_003528 401509 Hs.449445 NM_001032297 ZNF658B - zinc finger protein 658B (pseudogene) pseudo chr5-301 chr5 175534188 175534398 + 23.6 0.000 Intergenic Intergenic 55733 NM_022754 94081 Hs.369440 NM_022754 ENSG00000164466 SFXN1 SLC56A1|TCC sideroflexin 1 protein-coding chr3-1019 chr3 123258951 123259161 + 23.6 0.000 intron (NM_012430, intron 5 of 6) intron (NM_012430, intron 5 of 6) 57113 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr15-511 chr15 64700026 64700236 + 23.6 0.000 intron (NM_002537, intron 1 of 4) intron (NM_002537, intron 1 of 4) 3150 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr12-615 chr12 111578348 111578558 + 23.6 0.000 intron (NM_001310121, intron 1 of 25) Tigger3b|DNA|TcMar-Tigger 20862 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr10-335 chr10 79081536 79081746 + 23.6 0.000 intron (NM_020338, intron 1 of 24) intron (NM_020338, intron 1 of 24) 12675 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr20-251 chr20 31544317 31544527 + 23.6 0.000 intron (NM_178580, intron 3 of 12) intron (NM_178580, intron 3 of 12) 28841 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr16-509 chr16 2107026 2107236 + 23.6 0.000 promoter-TSS (NR_106775) promoter-TSS (NR_106775) -378 NR_106775 102465429 NR_106775 ENSG00000284008 MIR6511B1 MIR6511B-1|hsa-mir-6511b-1 microRNA 6511b-1 ncRNA chr8-451 chr8 42171711 42171921 + 23.6 0.000 TTS (NM_001134296) TTS (NM_001134296) 18753 NM_006803 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr9-563 chr9 112012173 112012383 + 23.6 0.000 Intergenic Intergenic 80178 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr15-369 chr15 64865880 64866090 + 23.6 0.000 3' UTR (NM_025201, exon 6 of 6) 3' UTR (NM_025201, exon 6 of 6) 24070 NM_025201 80301 Hs.709337 NM_025201 ENSG00000241839 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing O2 protein-coding chr13-145 chr13 110559588 110559798 + 23.6 0.000 intron (NM_017817, intron 1 of 1) intron (NM_017817, intron 1 of 1) 2029 NM_017817 55647 Hs.743563 NM_017817 ENSG00000139832 RAB20 - RAB20, member RAS oncogene family protein-coding chr10-298 chr10 100535761 100535971 + 23.6 0.000 promoter-TSS (NM_017902) promoter-TSS (NM_017902) -77 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr17-1098 chr17 69655045 69655255 + 23.6 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 61163 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr1-1676 chr1 58755502 58755712 + 23.6 0.000 Intergenic Intergenic 28440 NM_002228 3725 Hs.696684 NM_002228 ENSG00000177606 JUN AP-1|AP1|c-Jun|p39 Jun proto-oncogene, AP-1 transcription factor subunit protein-coding chr8-213 chr8 37802325 37802535 + 23.6 0.000 intron (NM_032777, intron 1 of 18) intron (NM_032777, intron 1 of 18) 5547 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr19-1539 chr19 29646085 29646295 + 23.6 0.000 Intergenic MER91A|DNA|hAT-Tip100 -19271 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr2-1066 chr2 231227408 231227618 + 23.6 0.000 intron (NM_001352757, intron 7 of 19) intron (NM_001352757, intron 7 of 19) 28882 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr13-364 chr13 45627167 45627377 + 23.6 0.000 Intergenic Plat_L3|LINE|CR1 -11533 NM_182542 220081 Hs.668747 NM_182542 ENSG00000165837 ERICH6B FAM194B glutamate rich 6B protein-coding chr9-496 chr9 127542109 127542319 + 23.6 0.000 intron (NM_001035534, intron 1 of 13) intron (NM_001035534, intron 1 of 13) 26859 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr4-193 chr4 55853598 55853808 + 23.6 0.000 promoter-TSS (NM_018261) promoter-TSS (NM_018261) 53 NM_178237 55763 Hs.269665 NM_018261 ENSG00000090989 EXOC1 BM-102|SEC3|SEC3L1|SEC3P exocyst complex component 1 protein-coding chr14-390 chr14 103391060 103391270 + 23.6 0.000 intron (NM_001128920, intron 1 of 15) MER20|DNA|hAT-Charlie 5750 NM_001128918 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr11-922 chr11 3340093 3340303 + 23.4 0.000 Intergenic Intergenic 38948 NR_040083 7748 Hs.386294 NM_007152 ENSG00000005801 ZNF195 HRF1|ZNFP104 zinc finger protein 195 protein-coding chr2-826 chr2 74507496 74507706 + 23.4 0.000 promoter-TSS (NM_032673) promoter-TSS (NM_032673) 94 NM_032673 84759 Hs.316750 NM_032673 ENSG00000115289 PCGF1 2010002K04Rik|NSPC1|RNF3A-2|RNF68 polycomb group ring finger 1 protein-coding chr2-781 chr2 97662944 97663154 + 23.4 0.000 intron (NM_005735, intron 1 of 10) intron (NM_005735, intron 1 of 10) 995 NM_005735 10120 Hs.98791 NM_005735 ENSG00000115073 ACTR1B ARP1B|CTRN2|PC3 actin related protein 1B protein-coding chr12-470 chr12 27524112 27524322 + 23.4 0.000 promoter-TSS (NM_001198916) promoter-TSS (NM_001198916) 11 NM_003622 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr12-1149 chr12 124527937 124528147 + 23.4 0.000 intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 39570 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr16-556 chr16 67530263 67530473 + 23.4 0.000 intron (NM_001193523, intron 1 of 21) CpG 979 NM_001193523 79567 Hs.152717 NM_024519 ENSG00000039523 RIPOR1 FAM65A RHO family interacting cell polarization regulator 1 protein-coding chr8-460 chr8 132760537 132760747 + 23.4 0.000 promoter-TSS (NM_001145153) promoter-TSS (NM_001145153) -60 NM_001364885 137835 Hs.293842 NM_144649 ENSG00000165071 TMEM71 - transmembrane protein 71 protein-coding chr2-820 chr2 33158626 33158836 + 23.4 0.000 intron (NM_206943, intron 5 of 33) LTR90A|LTR|LTR 24134 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr11-760 chr11 47863300 47863510 + 23.4 0.000 Intergenic Intergenic -14861 NM_015231 23279 Hs.643526 NM_015231 ENSG00000030066 NUP160 NPHS19 nucleoporin 160 protein-coding chr9-1051 chr9 35340148 35340358 + 23.4 0.000 intron (NM_006377, intron 10 of 38) intron (NM_006377, intron 10 of 38) -1643 NM_001371187 chr3-1123 chr3 173993328 173993538 + 23.4 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -72637 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr7-396 chr7 5596150 5596360 + 23.4 0.000 intron (NM_003088, intron 1 of 4) intron (NM_003088, intron 1 of 4) 3439 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr11-548 chr11 72103331 72103541 + 23.4 0.000 promoter-TSS (NM_017907) promoter-TSS (NM_017907) -139 NM_017907 55004 Hs.731528 NM_017907 ENSG00000149357 LAMTOR1 C11orf59|PDRO|Ragulator1|p18|p27RF-Rho late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 protein-coding chr4-504 chr4 70958810 70959020 + 23.4 0.000 exon (NM_001244767, exon 2 of 4) exon (NM_001244767, exon 2 of 4) -34734 NM_000788 1633 Hs.709 NM_000788 ENSG00000156136 DCK - deoxycytidine kinase protein-coding chr5-617 chr5 78010188 78010398 + 23.4 0.000 intron (NM_003664, intron 26 of 26) intron (NM_003664, intron 26 of 26) 52046 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr2-2153 chr2 200656170 200656380 + 23.4 0.000 intron (NM_001159, intron 26 of 34) MamGypsy2-I|LTR|Gypsy -39448 NR_135012 107161151 Hs.148269 NR_135011 AOX3P-AOX2P AOX3/AOX3L1 AOX3P-AOX2P readthrough, transcribed pseudogene pseudo chrX-237 chrX 107562522 107562732 + 23.4 0.000 intron (NM_032428, intron 11 of 15) L2c|LINE|L2 -16806 NR_046750 100874122 Hs.600967 NR_046750 ENSG00000227610 FRMPD3-AS1 - FRMPD3 antisense RNA 1 ncRNA chr6-387 chr6 51098930 51099140 + 23.4 0.000 Intergenic MIR3|SINE|MIR 280164 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr14-708 chr14 89922240 89922450 + 23.4 0.000 TTS (NM_001284268) TTS (NM_001284268) 32191 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr12-325 chr12 121577071 121577281 + 23.4 0.000 intron (NM_001005366, intron 2 of 22) intron (NM_001005366, intron 2 of 22) 3070 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr17-645 chr17 43444667 43444877 + 23.4 0.000 promoter-TSS (NR_146952) promoter-TSS (NR_146952) -34 NR_031751 100313779 NR_031751 ENSG00000284344 MIR2117 - microRNA 2117 ncRNA chr4-717 chr4 124631848 124632058 + 23.4 0.000 Intergenic Intergenic -73519 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr5-464 chr5 54360164 54360374 + 23.4 0.000 intron (NR_126379, intron 1 of 4) intron (NR_126379, intron 1 of 4) 39325 NR_126379 104355136 Hs.559024 NR_126379 ENSG00000249069 LINC01033 - long intergenic non-protein coding RNA 1033 ncRNA chr10-319 chr10 102056023 102056233 + 23.4 0.000 promoter-TSS (NM_024541) promoter-TSS (NM_024541) 45 NM_024541 79591 Hs.16004 NM_024541 ENSG00000120029 ARMH3 C10orf76 armadillo like helical domain containing 3 protein-coding chr14-290 chr14 101927991 101928201 + 23.4 0.000 TTS (NM_001352913) TTS (NM_001352913) -36477 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr12-563 chr12 104456840 104457050 + 23.4 0.000 promoter-TSS (NM_001173982) promoter-TSS (NM_001173982) -3 NM_018413 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr3-288 chr3 119468949 119469159 + 23.4 0.000 promoter-TSS (NM_152305) promoter-TSS (NM_152305) 91 NR_024265 56983 Hs.231750 NM_152305 ENSG00000163389 POGLUT1 C3orf9|CLP46|KDELCL1|KTELC1|LGMD2Z|LGMDR21|MDS010|MDSRP|Rumi|hCLP46 protein O-glucosyltransferase 1 protein-coding chr1-756 chr1 35265090 35265300 + 23.4 0.000 Intergenic Intergenic -3514 NM_001350138 9202 Hs.269211 NM_005095 ENSG00000146463 ZMYM4 CDIR|MYM|ZNF198L3|ZNF262 zinc finger MYM-type containing 4 protein-coding chr1-1640 chr1 188090502 188090712 + 23.4 0.000 Intergenic Intergenic 646979 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr5-439 chr5 126002482 126002692 + 23.4 0.000 Intergenic Intergenic -176990 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr12-1239 chr12 26196544 26196754 + 23.4 0.000 intron (NM_005086, intron 1 of 2) intron (NM_005086, intron 1 of 2) 1076 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chrX-127 chrX 34885041 34885251 + 23.4 0.000 Intergenic Intergenic -57650 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr5-637 chr5 34710104 34710314 + 23.4 0.000 intron (NM_001145525, intron 4 of 19) MLT1C|LTR|ERVL-MaLR 22650 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr22-524 chr22 46816529 46816739 + 23.4 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 42707 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr2-920 chr2 223725509 223725719 + 23.4 0.000 Intergenic Intergenic 111968 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr6-225 chr6 125986437 125986647 + 23.4 0.000 promoter-TSS (NR_146804) promoter-TSS (NR_146804) 2 NR_146804 60487 Hs.404186 NM_021820 ENSG00000066651 TRMT11 C6orf75|MDS024|TRM11|TRMT11-1 tRNA methyltransferase 11 homolog protein-coding chr9-933 chr9 35333596 35333806 + 23.4 0.000 intron (NM_006377, intron 10 of 38) intron (NM_006377, intron 10 of 38) -8195 NM_001371187 chr5-598 chr5 177546535 177546745 + 23.4 0.000 intron (NM_001190946, intron 1 of 8) intron (NM_001190946, intron 1 of 8) 7455 NM_001366499 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr7-835 chr7 100545753 100545963 + 23.4 0.000 intron (NM_006076, intron 1 of 11) intron (NM_006076, intron 1 of 11) 6655 NM_006076 3268 Hs.521083 NM_006076 ENSG00000106351 AGFG2 HRBL|RABR ArfGAP with FG repeats 2 protein-coding chr11-1239 chr11 68472172 68472382 + 23.4 0.000 intron (NM_001352362, intron 2 of 24) intron (NM_001352362, intron 2 of 24) 11525 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr14-218 chr14 76918910 76919120 + 23.4 0.000 Intergenic Intergenic -40623 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr16-357 chr16 66751421 66751631 + 23.4 0.000 promoter-TSS (NM_001286157) promoter-TSS (NM_001286157) 83 NM_006141 1783 Hs.369068 NM_006141 ENSG00000135720 DYNC1LI2 DNCLI2|LIC2 dynein cytoplasmic 1 light intermediate chain 2 protein-coding chr8-168 chr8 101205531 101205741 + 23.4 0.000 promoter-TSS (NM_016096) promoter-TSS (NM_016096) 37 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr16-612 chr16 84952514 84952724 + 23.4 0.000 Intergenic Intergenic 58916 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr4-585 chr4 53307025 53307235 + 23.4 0.000 intron (NM_152540, intron 3 of 8) LTR33|LTR|ERVL 58931 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr20-49 chr20 35439118 35439328 + 23.4 0.000 promoter-TSS (NM_000557) promoter-TSS (NM_000557) -995 NM_000557 8200 Hs.1573 NM_000557 ENSG00000125965 GDF5 BDA1C|BMP-14|BMP14|CDMP1|LAP-4|LAP4|OS5|SYM1B|SYNS2 growth differentiation factor 5 protein-coding chr1-843 chr1 60990100 60990310 + 23.4 0.000 Intergenic Intergenic -19429 NR_110618 100996570 Hs.46616 NR_110617 ENSG00000237928 NFIA-AS2 - NFIA antisense RNA 2 ncRNA chr1-705 chr1 10975820 10976030 + 23.4 0.000 intron (NM_001170754, intron 2 of 12) intron (NM_001170754, intron 2 of 12) 6112 NM_001170754 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr1-1349 chr1 17586214 17586424 + 23.4 0.000 intron (NR_137287, intron 2 of 29) MIR|SINE|MIR 5766 NM_001011722 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr2-1155 chr2 156476937 156477147 + 23.4 0.000 intron (NM_000408, intron 2 of 16) intron (NM_000408, intron 2 of 16) 40663 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr16-829 chr16 83329054 83329264 + 23.4 0.000 intron (NM_001220489, intron 4 of 12) MER5A|DNA|hAT-Charlie -179187 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr6-280 chr6 25500070 25500280 + 23.4 0.000 exon (NM_017640, exon 17 of 37) exon (NM_017640, exon 17 of 37) -152040 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr11-675 chr11 76577231 76577441 + 23.4 0.000 Intergenic Intergenic 92602 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr2-1137 chr2 61220932 61221142 + 23.4 0.000 intron (NM_014709, intron 66 of 79) MER58A|DNA|hAT-Charlie 43619 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr1-1051 chr1 94142146 94142356 + 23.4 0.000 Intergenic Intergenic -21103 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr4-301 chr4 39697894 39698104 + 23.4 0.000 promoter-TSS (NM_001111113) promoter-TSS (NM_001111113) -137 NM_001111113 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr4-597 chr4 130257474 130257684 + 23.4 0.000 Intergenic Intergenic -118782 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr9-592 chr9 37485748 37485958 + 23.4 0.000 promoter-TSS (NM_022490) promoter-TSS (NM_022490) -82 NM_001282766 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr17-445 chr17 17723252 17723462 + 23.4 0.000 intron (NM_030665, intron 1 of 5) CpG 41899 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr1-1084 chr1 28505797 28506007 + 23.4 0.000 promoter-TSS (NR_030725) promoter-TSS (NR_030725) -41 NM_001048199 1104 Hs.469723 NM_001269 ENSG00000180198 RCC1 CHC1|RCC1-I|SNHG3-RCC1 regulator of chromosome condensation 1 protein-coding chr19-794 chr19 19591153 19591363 + 23.4 0.000 intron (NR_038198, intron 2 of 7) intron (NR_038198, intron 2 of 7) 27429 NM_025245 80714 Hs.466257 NM_025245 ENSG00000105717 PBX4 - PBX homeobox 4 protein-coding chrX-77 chrX 47233442 47233652 + 23.4 0.000 intron (NM_001371072, intron 1 of 20) CpG 538 NM_001371072 chr1-1568 chr1 17554179 17554389 + 23.4 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) 14586 NM_018125 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr13-146 chr13 29861790 29862000 + 23.4 0.000 Intergenic Intergenic -11278 NM_007106 5412 Hs.145575 NM_007106 ENSG00000122042 UBL3 HCG-1|PNSC1 ubiquitin like 3 protein-coding chr15-331 chr15 78709576 78709786 + 23.4 0.000 Intergenic Intergenic -42356 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr11-1346 chr11 33011667 33011877 + 23.4 0.000 Intergenic Intergenic -4106 NM_001077242 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chr2-756 chr2 182522410 182522620 + 23.4 0.000 promoter-TSS (NM_005019) promoter-TSS (NM_005019) 11 NM_005019 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr11-691 chr11 93661548 93661758 + 23.4 0.000 promoter-TSS (NM_033395) promoter-TSS (NM_033395) -29 NM_033395 85459 Hs.458418 NM_033395 ENSG00000166004 CEP295 KIAA1731 centrosomal protein 295 protein-coding chr17-1021 chr17 40290661 40290871 + 23.4 0.000 intron (NM_001254, intron 2 of 11) MER44B|DNA|TcMar-Tigger 2887 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding chr20-87 chr20 63956475 63956685 + 23.4 0.000 promoter-TSS (NR_148435) promoter-TSS (NR_148435) -164 NR_148435 54963 Hs.504998 NM_017859 ENSG00000198276 UCKL1 UCK1L|URKL1 uridine-cytidine kinase 1 like 1 protein-coding chr2-1431 chr2 208175429 208175639 + 23.4 0.000 intron (NM_001099334, intron 6 of 8) intron (NM_001099334, intron 6 of 8) -11945 NM_014617 1418 Hs.122566 NM_014617 ENSG00000168582 CRYGA CRY-g-A|CRYG1|CRYG5 crystallin gamma A protein-coding chr8-802 chr8 121811880 121812090 + 23.4 0.000 Intergenic Intergenic -170545 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr15-130 chr15 90902439 90902649 + 23.4 0.000 promoter-TSS (NR_135503) promoter-TSS (NR_135503) -121 NR_135503 4122 Hs.116459 NM_006122 ENSG00000196547 MAN2A2 MANA2X mannosidase alpha class 2A member 2 protein-coding chr10-447 chr10 89644969 89645179 + 23.4 0.000 exon (NM_148977, exon 1 of 7) exon (NM_148977, exon 1 of 7) 498 NM_148977 53354 Hs.163555 NM_138316 ENSG00000152782 PANK1 PANK pantothenate kinase 1 protein-coding chr3-588 chr3 51538448 51538658 + 23.4 0.000 promoter-TSS (NM_001322256) promoter-TSS (NM_001322256) -166 NM_001322253 23132 Hs.105399 NM_015106 ENSG00000164080 RAD54L2 ARIP4|HSPC325|SRISNF2L RAD54 like 2 protein-coding chr2-757 chr2 201071662 201071872 + 23.4 0.000 promoter-TSS (NM_173822) promoter-TSS (NM_173822) -96 NM_001321622 285172 Hs.24701 NM_173822 ENSG00000155744 FAM126B HYCC2 family with sequence similarity 126 member B protein-coding chr9-973 chr9 125650407 125650617 + 23.4 0.000 intron (NM_001006619, intron 4 of 10) L2b|LINE|L2 56696 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr10-530 chr10 30182851 30183061 + 23.4 0.000 Intergenic Intergenic -28896 NR_120653 101929279 Hs.559153 NR_120653 LOC101929279 - uncharacterized LOC101929279 ncRNA chr9-302 chr9 136400234 136400444 + 23.4 0.000 Intergenic CpG -1902 NM_003086 6621 Hs.113265 NM_003086 ENSG00000165684 SNAPC4 PTFalpha|SNAP190 small nuclear RNA activating complex polypeptide 4 protein-coding chr3-604 chr3 13513402 13513612 + 23.4 0.000 Intergenic Intergenic 33201 NM_001136041 79885 Hs.744132 NM_024827 ENSG00000163517 HDAC11 HD11 histone deacetylase 11 protein-coding chr8-537 chr8 94373317 94373527 + 23.4 0.000 intron (NM_012415, intron 14 of 14) MLT1J2|LTR|ERVL-MaLR 63522 NM_001256141 100861412 Hs.30561 NM_001256141 ENSG00000265817 FSBP - fibrinogen silencer binding protein protein-coding chr1-1805 chr1 167820116 167820326 + 23.4 0.000 intron (NM_018417, intron 30 of 32) CpG 93913 NM_018417 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr18-270 chr18 40867413 40867623 + 23.4 0.000 Intergenic Intergenic 653159 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr10-669 chr10 75469244 75469454 + 23.4 0.000 intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) 37725 NM_001305581 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr5-512 chr5 87267537 87267747 + 23.4 0.000 promoter-TSS (NM_002890) promoter-TSS (NM_002890) -241 NM_002890 5921 Hs.664080 NM_002890 ENSG00000145715 RASA1 CM-AVM|CMAVM|CMAVM1|GAP|PKWS|RASA|RASGAP|p120|p120GAP|p120RASGAP RAS p21 protein activator 1 protein-coding chr16-426 chr16 84972615 84972825 + 23.4 0.000 Intergenic AluSz6|SINE|Alu 38815 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr3-1028 chr3 144590867 144591077 + 23.4 0.000 Intergenic Intergenic 617891 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr15-341 chr15 72203531 72203741 + 23.4 0.000 intron (NM_182470, intron 8 of 10) intron (NM_182470, intron 8 of 10) -5849 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr3-680 chr3 132972416 132972626 + 23.4 0.000 Intergenic Intergenic -65767 NM_023943 66000 Hs.191616 NM_023943 ENSG00000144868 TMEM108 CT124|RTLN transmembrane protein 108 protein-coding chr17-919 chr17 82864069 82864279 + 23.4 0.000 intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) -24152 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chrX-215 chrX 133258646 133258856 + 23.4 0.000 Intergenic L1MB2|LINE|L1 -40397 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr16-384 chr16 31442886 31443096 + 23.4 0.000 promoter-TSS (NM_001136509) promoter-TSS (NM_001136509) 169 NM_001353381 283933 Hs.722243 NM_001136509 ENSG00000176723 ZNF843 - zinc finger protein 843 protein-coding chr20-292 chr20 47318810 47319020 + 23.4 0.000 non-coding (NR_024594, exon 1 of 1) non-coding (NR_024594, exon 1 of 1) 413 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr3-938 chr3 115658301 115658511 + 23.4 0.000 intron (NM_002045, intron 1 of 2) intron (NM_002045, intron 1 of 2) 34896 NM_001130064 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr6-958 chr6 14864064 14864274 + 23.4 0.000 Intergenic Intergenic -381900 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr3-821 chr3 124791654 124791864 + 23.4 0.000 intron (NM_001354766, intron 9 of 13) intron (NM_001354766, intron 9 of 13) 59320 NR_036088 100422864 NR_036088 ENSG00000265981 MIR544B - microRNA 544b ncRNA chr10-535 chr10 78931846 78932056 + 23.4 0.000 Intergenic Intergenic 135497 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr7-499 chr7 32335204 32335414 + 23.4 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) -35981 NM_001322058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr12-505 chr12 53268339 53268549 + 23.4 0.000 intron (NM_012291, intron 1 of 30) CpG 145 NM_012291 9700 Hs.153479 NM_012291 ENSG00000135476 ESPL1 ESP1|SEPA extra spindle pole bodies like 1, separase protein-coding chr11-934 chr11 66970774 66970984 + 23.4 0.000 Intergenic Intergenic -4425 NM_001136485 254439 Hs.232604 NM_001136485 ENSG00000173237 C11orf86 - chromosome 11 open reading frame 86 protein-coding chr3-513 chr3 10286939 10287149 + 23.4 0.000 intron (NM_001134946, intron 1 of 2) intron (NM_001134946, intron 1 of 2) 2625 NR_026829 84657 Hs.302131 NM_001039102 ENSG00000231177 LINC00852 C3orf42|GHRL-AS2|GHRLOS2|NAG73 long intergenic non-protein coding RNA 852 ncRNA chr17-1603 chr17 66354124 66354334 + 23.4 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 51616 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr1-516 chr1 23800758 23800968 + 23.4 0.000 promoter-TSS (NM_000403) promoter-TSS (NM_000403) -109 NM_001008216 2582 Hs.632380 NM_000403 ENSG00000117308 GALE SDR1E1 UDP-galactose-4-epimerase protein-coding chr1-875 chr1 7471115 7471325 + 23.3 0.000 intron (NM_001349608, intron 5 of 21) (CTGT)n|Simple_repeat|Simple_repeat -81466 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr6-832 chr6 145151682 145151892 + 23.3 0.000 Intergenic L1M7|LINE|L1 535090 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr12-412 chr12 12611808 12612018 + 23.3 0.000 promoter-TSS (NM_001310) promoter-TSS (NM_001310) 37 NM_001310 1389 Hs.591156 NM_001310 ENSG00000111269 CREBL2 - cAMP responsive element binding protein like 2 protein-coding chr22-311 chr22 50260952 50261162 + 23.3 0.000 intron (NM_002969, intron 2 of 11) CpG 626 NM_002969 6300 Hs.432642 NM_002969 ENSG00000188130 MAPK12 ERK-6|ERK3|ERK6|MAPK 12|P38GAMMA|PRKM12|SAPK-3|SAPK3 mitogen-activated protein kinase 12 protein-coding chr13-261 chr13 73938530 73938740 + 23.3 0.000 intron (NM_007249, intron 3 of 7) intron (NM_007249, intron 3 of 7) 195294 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr22-185 chr22 50200877 50201087 + 23.3 0.000 promoter-TSS (NM_031454) promoter-TSS (NM_031454) -29 NM_031454 83642 Hs.365405 NM_031454 ENSG00000073169 SELENOO SELO selenoprotein O protein-coding chr17-607 chr17 8200119 8200329 + 23.3 0.000 Intergenic MER50C|LTR|ERV1 10001 NR_132731 9212 Hs.442658 NM_004217 ENSG00000178999 AURKB AIK2|AIM-1|AIM1|ARK-2|ARK2|AurB|IPL1|PPP1R48|STK-1|STK12|STK5|aurkb-sv1|aurkb-sv2 aurora kinase B protein-coding chr20-86 chr20 62794229 62794439 + 23.3 0.000 Intergenic (GGCGGA)n|Simple_repeat|Simple_repeat -2139 NR_136405 55257 Hs.443260 NM_018270 ENSG00000101189 MRGBP C20orf20|Eaf7|MRG15BP|URCC4 MRG domain binding protein protein-coding chr10-541 chr10 119114026 119114236 + 23.3 0.000 intron (NM_001303113, intron 3 of 7) intron (NM_001303113, intron 3 of 7) 10018 NR_130122 404636 Hs.434241 NM_207009 ENSG00000119979 DENND10 FAM45A DENN domain containing 10 protein-coding chr4-181 chr4 165378990 165379200 + 23.3 0.000 promoter-TSS (NM_001873) promoter-TSS (NM_001873) 87 NM_001873 1363 Hs.75360 NM_001873 ENSG00000109472 CPE CPH carboxypeptidase E protein-coding chr4-592 chr4 102627857 102628067 + 23.3 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -125476 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chr22-309 chr22 46501859 46502069 + 23.3 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 35656 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr19-826 chr19 2417849 2418059 + 23.3 0.000 intron (NM_182973, intron 11 of 16) intron (NM_182973, intron 11 of 16) 9632 NM_012458 26517 Hs.75056 NM_012458 ENSG00000099800 TIMM13 TIM13|TIM13B|TIMM13A|TIMM13B|ppv1 translocase of inner mitochondrial membrane 13 protein-coding chr2-555 chr2 234974832 234975042 + 23.3 0.000 intron (NM_001371302, intron 1 of 5) intron (NM_001371302, intron 1 of 5) -3766 NM_001371304 chr3-636 chr3 58526764 58526974 + 23.3 0.000 intron (NM_003500, intron 9 of 14) intron (NM_003500, intron 9 of 14) 10321 NM_003500 8309 Hs.444959 NM_003500 ENSG00000168306 ACOX2 BCOX|BRCACOX|BRCOX|CBAS6|THCCox acyl-CoA oxidase 2 protein-coding chr19-569 chr19 19405415 19405625 + 23.3 0.000 intron (NM_001359631, intron 1 of 10) CpG 19717 NM_001359631 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr1-1536 chr1 186102582 186102792 + 23.3 0.000 intron (NM_031935, intron 68 of 106) L3|LINE|CR1 -193586 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr10-372 chr10 3045757 3045967 + 23.3 0.000 Intergenic Intergenic 21071 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr12-855 chr12 857706 857916 + 23.3 0.000 intron (NM_001184985, intron 5 of 27) intron (NM_001184985, intron 5 of 27) 75265 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr2-773 chr2 54520784 54520994 + 23.3 0.000 intron (NM_003128, intron 1 of 35) intron (NM_003128, intron 1 of 35) -8333 NR_002229 56969 Hs.657366 NM_020217 RPL23AP32 RPL23A_9_220 ribosomal protein L23a pseudogene 32 pseudo chr10-570 chr10 71963570 71963780 + 23.3 0.000 promoter-TSS (NM_004273) promoter-TSS (NM_004273) -720 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr1-3238 chr1 193569758 193569968 + 23.3 0.000 Intergenic MER5A|DNA|hAT-Charlie 265118 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr15-263 chr15 34722401 34722611 + 23.3 0.000 Intergenic Intergenic 32492 NM_020660 57369 Hs.283816 NM_020660 ENSG00000159248 GJD2 CX36|GJA9 gap junction protein delta 2 protein-coding chr2-1621 chr2 234308760 234308970 + 23.3 0.000 Intergenic Intergenic 145730 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr11-373 chr11 1346756 1346966 + 23.3 0.000 Intergenic Intergenic 37153 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA chr2-1020 chr2 14757067 14757277 + 23.3 0.000 Intergenic Intergenic 124455 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr6-672 chr6 117448827 117449037 + 23.3 0.000 Intergenic L1MB7|LINE|L1 -23077 NM_002944 6098 Hs.1041 NM_002944 ENSG00000047936 ROS1 MCF3|ROS|c-ros-1 ROS proto-oncogene 1, receptor tyrosine kinase protein-coding chr19-592 chr19 35000202 35000412 + 23.3 0.000 promoter-TSS (NM_020895) promoter-TSS (NM_020895) -16 NM_001320034 57655 Hs.515351 NM_020895 ENSG00000089351 GRAMD1A KIAA1533 GRAM domain containing 1A protein-coding chr4-475 chr4 2931001 2931211 + 23.3 0.000 exon (NM_001120, exon 11 of 12) exon (NM_001120, exon 11 of 12) 3131 NM_001120 10227 Hs.632581 NM_001120 ENSG00000109736 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding chr1-2213 chr1 103266203 103266413 + 23.3 0.000 Intergenic Intergenic -157786 NM_080630 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr2-929 chr2 69830456 69830666 + 23.3 0.000 intron (NM_178439, intron 1 of 13) intron (NM_178439, intron 1 of 13) 901 NM_178439 64395 Hs.293971 NM_178439 ENSG00000087338 GMCL1 BTBD13|GCL|GCL1|SPATA29 germ cell-less 1, spermatogenesis associated protein-coding chr20-377 chr20 11387329 11387539 + 23.3 0.000 Intergenic MER5A1|DNA|hAT-Charlie -114051 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr1-1071 chr1 236604486 236604696 + 23.3 0.000 promoter-TSS (NM_018072) promoter-TSS (NM_018072) -75 NM_018072 55127 Hs.708114 NM_018072 ENSG00000119285 HEATR1 BAP28|UTP10 HEAT repeat containing 1 protein-coding chr10-272 chr10 91923776 91923986 + 23.3 0.000 5' UTR (NM_003972, exon 1 of 38) 5' UTR (NM_003972, exon 1 of 38) 111 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chr7-789 chr7 30162759 30162969 + 23.3 0.000 TTS (NM_152793) TTS (NM_152793) 27878 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr13-152 chr13 114281257 114281467 + 23.3 0.000 promoter-TSS (NM_023011) promoter-TSS (NM_023011) -239 NR_148482 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3A regulator of nonsense mediated mRNA decay protein-coding chr8-480 chr8 97251638 97251848 + 23.3 0.000 intron (NR_125390, intron 2 of 2) LTR16A2|LTR|ERVL 26185 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr10-826 chr10 102175416 102175626 + 23.3 0.000 Intergenic Intergenic 23132 NM_001284389 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding chr5-179 chr5 139661140 139661350 + 23.3 0.000 intron (NM_001317207, intron 1 of 2) CpG 1690 NM_001317206 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr1-1919 chr1 245881133 245881343 + 23.3 0.000 intron (NM_022743, intron 8 of 11) intron (NM_022743, intron 8 of 11) 536174 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr2-899 chr2 120237525 120237735 + 23.3 0.000 Intergenic Intergenic -14230 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr20-228 chr20 63707858 63708068 + 23.3 0.000 promoter-TSS (NR_051954) promoter-TSS (NR_051954) 13 NM_001267547 10139 Hs.389277 NM_003224 ENSG00000101246 ARFRP1 ARL18|ARP|Arp1 ADP ribosylation factor related protein 1 protein-coding chr1-1209 chr1 196651815 196652025 + 23.3 0.000 promoter-TSS (NM_000186) promoter-TSS (NM_000186) 42 NM_000186 3075 Hs.363396 NM_000186 ENSG00000000971 CFH AHUS1|AMBP1|ARMD4|ARMS1|CFHL3|FH|FHL1|HF|HF1|HF2|HUS complement factor H protein-coding chr8-268 chr8 100213026 100213236 + 23.3 0.000 exon (NM_172218, exon 11 of 19) exon (NM_172218, exon 11 of 19) 54796 NM_003114 6674 Hs.591866 NM_003114 ENSG00000104450 SPAG1 CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS sperm associated antigen 1 protein-coding chr3-423 chr3 195897210 195897420 + 23.3 0.000 intron (NM_005781, intron 1 of 14) intron (NM_005781, intron 1 of 14) -1967 NM_001010938 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr15-501 chr15 84948495 84948705 + 23.3 0.000 intron (NM_001321722, intron 18 of 18) intron (NM_001321722, intron 18 of 18) -31867 NM_001243137 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr1-725 chr1 206470432 206470642 + 23.3 0.000 promoter-TSS (NM_014002) promoter-TSS (NM_014002) 61 NM_014002 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of nuclear factor kappa B kinase subunit epsilon protein-coding chr6-213 chr6 41787353 41787563 + 23.3 0.000 promoter-TSS (NM_001134493) promoter-TSS (NM_001134493) 15 NM_001134493 100188893 Hs.731633 NM_001134493 ENSG00000214736 TOMM6 OBTP|TOM6 translocase of outer mitochondrial membrane 6 protein-coding chr10-973 chr10 101892888 101893098 + 23.3 0.000 intron (NM_024541, intron 23 of 25) intron (NM_024541, intron 23 of 25) -49073 NM_173192 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr15-158 chr15 75903792 75904002 + 23.3 0.000 promoter-TSS (NR_037623) promoter-TSS (NR_037623) 19 NM_147188 26263 Hs.591115 NM_012170 ENSG00000167196 FBXO22 FBX22|FISTC1 F-box protein 22 protein-coding chr2-431 chr2 232697071 232697281 + 23.3 0.000 promoter-TSS (NR_103493) promoter-TSS (NR_103493) -155 NR_103493 26058 Hs.565319 NM_015575 ENSG00000204120 GIGYF2 GYF2|PARK11|PERQ2|PERQ3|TNRC15 GRB10 interacting GYF protein 2 protein-coding chrX-189 chrX 16719364 16719574 + 23.3 0.000 promoter-TSS (NM_032796) promoter-TSS (NM_032796) -143 NM_032796 94056 Hs.744256 NM_032796 ENSG00000169895 SYAP1 BSTA|PRO3113 synapse associated protein 1 protein-coding chr5-1188 chr5 61274698 61274908 + 23.3 0.000 Intergenic Intergenic -9874 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr1-804 chr1 1360738 1360948 + 23.3 0.000 intron (NM_001282582, intron 1 of 10) intron (NM_001282582, intron 1 of 10) 956 NM_001282583 54587 Hs.515687 NM_032348 ENSG00000162576 MXRA8 ASP3 matrix remodeling associated 8 protein-coding chr18-93 chr18 57630245 57630455 + 23.3 0.000 promoter-TSS (NM_001242804) promoter-TSS (NM_001242804) 19 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr4-406 chr4 121823904 121824114 + 23.3 0.000 promoter-TSS (NM_001237) promoter-TSS (NM_001237) -126 NM_001237 890 Hs.58974 NM_001237 ENSG00000145386 CCNA2 CCN1|CCNA cyclin A2 protein-coding chr3-581 chr3 355676 355886 + 23.3 0.000 intron (NM_001253388, intron 9 of 24) intron (NM_001253388, intron 9 of 24) 30014 NR_110739 101927193 Hs.677744 NR_110739 ENSG00000234661 CHL1-AS1 - CHL1 antisense RNA 1 ncRNA chr19-670 chr19 50804883 50805093 + 23.3 0.000 promoter-TSS (NM_032712) promoter-TSS (NM_032712) -135 NM_001290149 84798 Hs.256301 NM_032712 ENSG00000167747 C19orf48 - chromosome 19 open reading frame 48 protein-coding chr1-941 chr1 8890472 8890682 + 23.3 0.000 Intergenic AluY|SINE|Alu 11742 NR_038351 100505975 Hs.429843 NR_038351 ENSG00000230679 ENO1-AS1 - ENO1 antisense RNA 1 ncRNA chr4-688 chr4 184448835 184449045 + 23.3 0.000 intron (NM_002199, intron 1 of 8) intron (NM_002199, intron 1 of 8) 25610 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr8-796 chr8 104754500 104754710 + 23.3 0.000 Intergenic Intergenic -165581 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr12-208 chr12 47812940 47813150 + 23.3 0.000 intron (NM_015401, intron 1 of 25) CpG 6858 NM_001368046 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr5-437 chr5 96935047 96935257 + 23.3 0.000 promoter-TSS (NM_005575) promoter-TSS (NM_005575) -928 NM_005575 4012 Hs.527199 NM_005575 ENSG00000113441 LNPEP CAP|IRAP|P-LAP|PLAP leucyl and cystinyl aminopeptidase protein-coding chr1-669 chr1 16237175 16237385 + 23.3 0.000 promoter-TSS (NM_030907) promoter-TSS (NM_030907) -97 NM_030907 79363 Hs.546430 NM_030907 ENSG00000132881 CPLANE2 C1orf89|RSG1 ciliogenesis and planar polarity effector 2 protein-coding chr17-298 chr17 44006746 44006956 + 23.3 0.000 intron (NM_153006, intron 4 of 6) CpG-11225 2229 NM_153006 162417 Hs.8876 NM_153006 ENSG00000161653 NAGS AGAS|ARGA N-acetylglutamate synthase protein-coding chr16-536 chr16 31713141 31713351 + 23.3 0.000 promoter-TSS (NM_001130913) promoter-TSS (NM_001130913) 17 NM_001130913 124411 Hs.528826 NM_001004300 ENSG00000197302 ZNF720 - zinc finger protein 720 protein-coding chr11-764 chr11 86916484 86916694 + 23.3 0.000 intron (NR_120592, intron 2 of 2) intron (NR_120592, intron 2 of 2) 38806 NM_012193 8322 Hs.591968 NM_012193 ENSG00000174804 FZD4 CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4 frizzled class receptor 4 protein-coding chr6-284 chr6 36027541 36027751 + 23.3 0.000 promoter-TSS (NM_001315) promoter-TSS (NM_001315) -31 NM_001315 1432 Hs.485233 NM_001315 ENSG00000112062 MAPK14 CSBP|CSBP1|CSBP2|CSPB1|EXIP|Mxi2|PRKM14|PRKM15|RK|SAPK2A|p38|p38ALPHA mitogen-activated protein kinase 14 protein-coding chr11-1026 chr11 103625356 103625566 + 23.3 0.000 Intergenic LTR26C|LTR|ERV1 -224445 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr6-268 chr6 17393348 17393558 + 23.3 0.000 promoter-TSS (NM_001363534) promoter-TSS (NM_001363534) -52 NM_001363534 10486 Hs.132902 NM_006366 ENSG00000112186 CAP2 - cyclase associated actin cytoskeleton regulatory protein 2 protein-coding chr12-498 chr12 1351993 1352203 + 23.3 0.000 intron (NR_027948, intron 15 of 19) intron (NR_027948, intron 15 of 19) -148393 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr1-1415 chr1 15028259 15028469 + 23.3 0.000 intron (NM_001370231, intron 3 of 8) intron (NM_001370231, intron 3 of 8) 82445 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr9-725 chr9 98263802 98264012 + 23.3 0.000 Intergenic Intergenic -8258 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr2-328 chr2 31233932 31234142 + 23.3 0.000 promoter-TSS (NM_014600) promoter-TSS (NM_014600) -80 NM_001321270 440854 Hs.468059 NM_001145122 ENSG00000214711 CAPN14 - calpain 14 protein-coding chr16-825 chr16 80540755 80540965 + 23.3 0.000 promoter-TSS (NR_130942) promoter-TSS (NR_130942) 126 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr17-550 chr17 77471850 77472060 + 23.3 0.000 intron (NM_001293698, intron 1 of 9) intron (NM_001293698, intron 1 of 9) -3288 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr1-1068 chr1 221335697 221335907 + 23.3 0.000 intron (NR_024236, intron 1 of 1) intron (NR_024236, intron 1 of 1) 494 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr18-323 chr18 7876373 7876583 + 23.3 0.000 intron (NM_002845, intron 2 of 30) MLT1H|LTR|ERVL-MaLR 309162 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chrX-173 chrX 40647629 40647839 + 23.3 0.000 promoter-TSS (NM_001330455) promoter-TSS (NM_001330455) -173 NM_001330455 159013 Hs.495961 NM_144970 ENSG00000185753 CXorf38 - chromosome X open reading frame 38 protein-coding chr15-548 chr15 39404845 39405055 + 23.3 0.000 Intergenic Intergenic 154281 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr2-732 chr2 74843376 74843586 + 23.3 0.000 intron (NM_000189, intron 1 of 17) intron (NM_000189, intron 1 of 17) 10826 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr4-860 chr4 94507659 94507869 + 23.3 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 55822 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr1-1118 chr1 37990073 37990283 + 23.3 0.000 promoter-TSS (NM_001320830) promoter-TSS (NM_001320830) -156 NM_006802 10946 Hs.77897 NM_006802 ENSG00000183431 SF3A3 PRP9|PRPF9|SAP61|SF3a60 splicing factor 3a subunit 3 protein-coding chr7-614 chr7 101121969 101122179 + 23.3 0.000 Intergenic Intergenic -5015 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr22-319 chr22 38982218 38982428 + 23.3 0.000 promoter-TSS (NM_004900) promoter-TSS (NM_004900) -24 NM_004900 9582 Hs.226307 NM_004900 ENSG00000179750 APOBEC3B A3B|APOBEC1L|ARCD3|ARP4|DJ742C19.2|PHRBNL|bK150C2.2 apolipoprotein B mRNA editing enzyme catalytic subunit 3B protein-coding chr9-954 chr9 76688117 76688327 + 23.3 0.000 intron (NM_001308049, intron 1 of 11) intron (NM_001308049, intron 1 of 11) 4193 NM_001308050 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr17-411 chr17 68512343 68512553 + 23.3 0.000 promoter-TSS (NM_001369390) promoter-TSS (NM_001369390) 69 NM_001276289 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr15-168 chr15 74615622 74615832 + 23.3 0.000 exon (NM_001130028, exon 1 of 13) exon (NM_001130028, exon 1 of 13) 733 NM_001130028 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr2-955 chr2 59301862 59302072 + 23.3 0.000 Intergenic Intergenic 84259 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr20-457 chr20 48983530 48983740 + 23.3 0.000 intron (NM_006420, intron 14 of 38) L2a|LINE|L2 61924 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr7-949 chr7 101519680 101519890 + 23.3 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 49221 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr11-665 chr11 34357910 34358120 + 23.3 0.000 promoter-TSS (NM_145804) promoter-TSS (NM_145804) -5 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr20-168 chr20 3313258 3313468 + 23.3 0.000 intron (NM_001009984, intron 20 of 36) intron (NM_001009984, intron 20 of 36) -74173 NR_135000 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr5-461 chr5 16575215 16575425 + 23.3 0.000 intron (NM_001034850, intron 1 of 8) intron (NM_001034850, intron 1 of 8) -40606 NR_109946 101929524 Hs.734029 NR_109946 ENSG00000246214 LOC101929524 - uncharacterized LOC101929524 ncRNA chr13-296 chr13 109257048 109257258 + 23.3 0.000 Intergenic Intergenic -89850 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr20-348 chr20 13839516 13839726 + 23.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 54593 NM_024120 79133 Hs.472165 NM_024120 ENSG00000101247 NDUFAF5 C20orf7|MC1DN16|bA526K24.2|dJ842G6.1 NADH:ubiquinone oxidoreductase complex assembly factor 5 protein-coding chr19-433 chr19 8513744 8513954 + 23.3 0.000 intron (NM_032370, intron 1 of 5) CpG 318 NM_001146175 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr4-327 chr4 77818094 77818304 + 23.3 0.000 intron (NM_001365006, intron 1 of 11) intron (NM_001365006, intron 1 of 11) 865 NM_001365007 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr10-859 chr10 116688602 116688812 + 23.3 0.000 intron (NM_001330164, intron 7 of 12) intron (NM_001330164, intron 7 of 12) -18425 NM_001330142 143379 Hs.121347 NM_144661 ENSG00000165863 C10orf82 - chromosome 10 open reading frame 82 protein-coding chr14-155 chr14 73612554 73612764 + 23.3 0.000 exon (NM_001365788, exon 1 of 3) exon (NM_001365788, exon 1 of 3) 142 NM_001365788 641372 Hs.122038 NM_001037162 ENSG00000205669 ACOT6 C14orf42|c14_5530 acyl-CoA thioesterase 6 protein-coding chr4-715 chr4 118918456 118918666 + 23.3 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) 29707 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr10-640 chr10 132482054 132482264 + 23.3 0.000 Intergenic MER34B|LTR|ERV1 36970 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr2-344 chr2 86623675 86623885 + 23.3 0.000 promoter-TSS (NM_001198951) promoter-TSS (NM_001198951) 85 NM_005667 7844 Hs.469199 NM_005667 ENSG00000239305 RNF103 HKF-1|KF-1|KF1|ZFP-103|ZFP103 ring finger protein 103 protein-coding chr2-725 chr2 238287695 238287905 + 23.3 0.000 intron (NM_022817, intron 1 of 22) intron (NM_022817, intron 1 of 22) 810 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr20-534 chr20 45055217 45055427 + 23.3 0.000 intron (NM_001352385, intron 11 of 11) intron (NM_001352385, intron 11 of 11) 45805 NM_001322799 3787 Hs.117780 NM_002251 ENSG00000124134 KCNS1 Kv9.1 potassium voltage-gated channel modifier subfamily S member 1 protein-coding chr1-1152 chr1 26692328 26692538 + 23.2 0.000 non-coding (NR_135804, exon 1 of 1) non-coding (NR_135804, exon 1 of 1) 1698 NR_135804 101928728 Hs.128770 NR_135804 ENSG00000260063 LOC101928728 - uncharacterized LOC101928728 ncRNA chr10-540 chr10 113709418 113709628 + 23.2 0.000 intron (NM_001267058, intron 1 of 5) intron (NM_001267058, intron 1 of 5) 178 NM_001267058 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding chr4-700 chr4 53541604 53541814 + 23.2 0.000 intron (NM_001126328, intron 2 of 10) intron (NM_001126328, intron 2 of 10) 16560 NM_032622 84708 Hs.518760 NM_032622 ENSG00000072201 LNX1 LNX|MPDZ|PDZRN2 ligand of numb-protein X 1 protein-coding chr4-1027 chr4 13892297 13892507 + 23.2 0.000 intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -219566 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr2-636 chr2 237500852 237501062 + 23.2 0.000 intron (NM_024101, intron 2 of 15) L2b|LINE|L2 -9974 NR_106869 102465486 NR_106869 ENSG00000277842 MIR6811 hsa-mir-6811 microRNA 6811 ncRNA chr2-1110 chr2 143426385 143426595 + 23.2 0.000 intron (NM_018460, intron 6 of 13) intron (NM_018460, intron 6 of 13) 297071 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr8-881 chr8 23175215 23175425 + 23.2 0.000 Intergenic MER21C|LTR|ERVL -11293 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr6-436 chr6 130324748 130324958 + 23.2 0.000 intron (NM_001258275, intron 1 of 13) intron (NM_001258275, intron 1 of 13) 41015 NM_001258275 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr2-1170 chr2 220277391 220277601 + 23.2 0.000 Intergenic Intergenic -370931 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr6-404 chr6 142147110 142147320 + 23.2 0.000 promoter-TSS (NM_001286372) promoter-TSS (NM_001286372) -48 NM_016485 51534 Hs.431367 NM_016485 ENSG00000009844 VTA1 C6orf55|DRG-1|DRG1|HSPC228|LIP5|My012|SBP1 vesicle trafficking 1 protein-coding chr9-561 chr9 76700133 76700343 + 23.2 0.000 intron (NM_001308048, intron 9 of 17) intron (NM_001308048, intron 9 of 17) -7823 NM_001308051 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr9-929 chr9 13720158 13720368 + 23.2 0.000 Intergenic Intergenic -207708 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr20-210 chr20 24634785 24634995 + 23.2 0.000 intron (NM_024893, intron 3 of 3) intron (NM_024893, intron 3 of 3) 164929 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr16-648 chr16 75402185 75402395 + 23.2 0.000 intron (NM_006324, intron 4 of 6) intron (NM_006324, intron 4 of 6) 31213 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr1-1651 chr1 226547796 226548006 + 23.2 0.000 promoter-TSS (NM_001003665) promoter-TSS (NM_001003665) -863 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr14-151 chr14 63543222 63543432 + 23.2 0.000 promoter-TSS (NM_001282180) promoter-TSS (NM_001282180) 50 NM_006246 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr4-326 chr4 76306094 76306304 + 23.2 0.000 5' UTR (NM_003943, exon 1 of 2) 5' UTR (NM_003943, exon 1 of 2) 173 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding chr11-1486 chr11 123083674 123083884 + 23.2 0.000 exon (NM_024769, exon 4 of 7) exon (NM_024769, exon 4 of 7) -21643 NM_153201 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr9-469 chr9 95127639 95127849 + 23.2 0.000 intron (NM_001243744, intron 8 of 13) intron (NM_001243744, intron 8 of 13) -41650 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr17-466 chr17 17695232 17695442 + 23.2 0.000 intron (NM_030665, intron 1 of 5) intron (NM_030665, intron 1 of 5) 13879 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr19-877 chr19 37999610 37999820 + 23.2 0.000 intron (NM_015073, intron 1 of 21) intron (NM_015073, intron 1 of 21) 92507 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr7-573 chr7 42096679 42096889 + 23.2 0.000 intron (NM_000168, intron 3 of 14) intron (NM_000168, intron 3 of 14) 140425 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr19-654 chr19 56393329 56393539 + 23.2 0.000 promoter-TSS (NR_037159) promoter-TSS (NR_037159) 100 NM_144690 147948 Hs.244391 NM_144690 ENSG00000018869 ZNF582 - zinc finger protein 582 protein-coding chr1-1738 chr1 147292908 147293118 + 23.2 0.000 intron (NM_001348462, intron 20 of 22) intron (NM_001348462, intron 20 of 22) 49871 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr11-1444 chr11 70788420 70788630 + 23.2 0.000 intron (NM_012309, intron 13 of 24) Tigger7|DNA|TcMar-Tigger -74265 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA chr11-936 chr11 73931348 73931558 + 23.2 0.000 TTS (NM_025155) TTS (NM_025155) -18866 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr10-1439 chr10 48534071 48534281 + 23.2 0.000 intron (NR_144642, intron 3 of 9) intron (NR_144642, intron 3 of 9) -22587 NR_146782 100689073 Hs.667964 NR_146782 ARHGAP22-IT1 - ARHGAP22 intronic transcript 1 ncRNA chr12-408 chr12 120725789 120725999 + 23.2 0.000 promoter-TSS (NM_001302554) promoter-TSS (NM_001302554) 68 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr1-1358 chr1 26705917 26706127 + 23.2 0.000 intron (NM_139135, intron 1 of 19) intron (NM_139135, intron 1 of 19) 10007 NM_006015 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding chr1-902 chr1 223726664 223726874 + 23.2 0.000 intron (NM_001146068, intron 2 of 20) intron (NM_001146068, intron 2 of 20) 14230 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr3-543 chr3 50189317 50189527 + 23.2 0.000 TTS (NM_001318800) TTS (NM_001318800) -2188 NM_000172 2779 Hs.517978 NM_000172 ENSG00000114349 GNAT1 CSNB1G|CSNBAD3|GBT1|GNATR G protein subunit alpha transducin 1 protein-coding chr9-1052 chr9 35385082 35385292 + 23.2 0.000 intron (NM_006377, intron 21 of 38) intron (NM_006377, intron 21 of 38) -21568 NR_110320 158381 Hs.575661 NR_003581 ENSG00000179766 ATP8B5P FetA ATPase phospholipid transporting 8B5, pseudogene pseudo chr2-904 chr2 162085586 162085796 + 23.2 0.000 Intergenic MER34-int|LTR|ERV1 10834 NR_147697 100131604 NR_147697 LOC100131604 - uncharacterized LOC100131604 ncRNA chr15-424 chr15 70271630 70271840 + 23.2 0.000 Intergenic ERVL-B4-int|LTR|ERVL -173818 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr8-307 chr8 94303728 94303938 + 23.2 0.000 Intergenic Intergenic -41514 NM_181702 2669 Hs.654463 NM_005261 ENSG00000164949 GEM KIR GTP binding protein overexpressed in skeletal muscle protein-coding chr16-437 chr16 69444288 69444498 + 23.2 0.000 intron (NM_030579, intron 1 of 4) intron (NM_030579, intron 1 of 4) 19798 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chrX-107 chrX 101051662 101051872 + 23.2 0.000 intron (NM_001167971, intron 1 of 13) CpG 344 NM_024917 79979 Hs.496501 NM_024917 ENSG00000188917 TRMT2B CXorf34|dJ341D10.3 tRNA methyltransferase 2 homolog B protein-coding chr3-1039 chr3 171995085 171995295 + 23.2 0.000 Intergenic Intergenic -44388 NM_022763 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr8-191 chr8 144792408 144792618 + 23.2 0.000 promoter-TSS (NM_000973) promoter-TSS (NM_000973) -123 NM_001317771 6132 Hs.178551 NM_000973 ENSG00000161016 RPL8 L8 ribosomal protein L8 protein-coding chr5-829 chr5 33690860 33691070 + 23.2 0.000 intron (NM_001324512, intron 3 of 21) intron (NM_001324512, intron 3 of 21) 201025 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chr15-247 chr15 78565447 78565657 + 23.2 0.000 promoter-TSS (NM_000745) promoter-TSS (NM_000745) 32 NM_001307945 1138 Hs.1614 NM_000745 ENSG00000169684 CHRNA5 LNCR2 cholinergic receptor nicotinic alpha 5 subunit protein-coding chr10-599 chr10 27658921 27659131 + 23.2 0.000 Intergenic Intergenic -85589 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr16-754 chr16 31877507 31877717 + 23.2 0.000 intron (NM_001265588, intron 2 of 4) MER92B|LTR|ERV1 3805 NM_003414 10308 Hs.460645 NM_003414 ENSG00000185947 ZNF267 HZF2 zinc finger protein 267 protein-coding chr5-482 chr5 94111526 94111736 + 23.2 0.000 promoter-TSS (NM_001163417) promoter-TSS (NM_001163417) 32 NM_032042 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr2-627 chr2 120540424 120540634 + 23.2 0.000 Intergenic Intergenic -74180 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr4-388 chr4 78644797 78645007 + 23.2 0.000 Intergenic Intergenic -1092 NR_038304 100505702 Hs.235795 NR_038303 LINC01094 - long intergenic non-protein coding RNA 1094 ncRNA chr13-246 chr13 113305253 113305463 + 23.2 0.000 intron (NM_005561, intron 1 of 8) intron (NM_005561, intron 1 of 8) 8119 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr1-1053 chr1 97989186 97989396 + 23.2 0.000 non-coding (NR_046105, exon 5 of 5) non-coding (NR_046105, exon 5 of 5) -47551 NR_146275 109729128 NR_146275 LINC01930 - long intergenic non-protein coding RNA 1930 ncRNA chr13-199 chr13 110955198 110955408 + 23.2 0.000 Intergenic MER89|LTR|ERV1 -10724 NR_126378 104355135 Hs.649708 NR_126378 LINC00431 - long intergenic non-protein coding RNA 431 ncRNA chr20-237 chr20 62386912 62387122 + 23.2 0.000 promoter-TSS (NM_001024) promoter-TSS (NM_001024) -86 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr7-1130 chr7 7157873 7158083 + 23.2 0.000 Intergenic Intergenic -24637 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr1-2322 chr1 157274962 157275172 + 23.2 0.000 Intergenic HERVFH21-int|LTR|ERV1 -136476 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr1-354 chr1 52141856 52142066 + 23.2 0.000 promoter-TSS (NM_004799) promoter-TSS (NM_004799) -128 NM_007324 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr12-380 chr12 124053998 124054208 + 23.2 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 80888 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr3-444 chr3 126911385 126911595 + 23.2 0.000 intron (NM_032343, intron 5 of 7) intron (NM_032343, intron 5 of 7) -77104 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr6-408 chr6 24775224 24775434 + 23.2 0.000 promoter-TSS (NM_001251991) promoter-TSS (NM_001251991) -84 NM_001251991 51053 Hs.234896 NM_015895 ENSG00000112312 GMNN Gem|MGORS6 geminin DNA replication inhibitor protein-coding chr2-1096 chr2 12759463 12759673 + 23.2 0.000 Intergenic Intergenic 22201 NR_036072 100422986 NR_036072 ENSG00000264370 MIR3125 mir-3125 microRNA 3125 ncRNA chr6-727 chr6 137013863 137014073 + 23.2 0.000 intron (NM_001278722, intron 2 of 6) intron (NM_001278722, intron 2 of 6) -20737 NR_027994 100294720 Hs.520412 NR_027994 ENSG00000225391 NHEG1 - neuroblastoma highly expressed 1 ncRNA chr1-891 chr1 70221202 70221412 + 23.2 0.000 promoter-TSS (NM_001350615) promoter-TSS (NM_001350615) -73 NM_001350616 9295 Hs.479693 NM_004768 ENSG00000116754 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine and arginine rich splicing factor 11 protein-coding chr19-540 chr19 9785878 9786088 + 23.2 0.000 5' UTR (NM_001353800, exon 1 of 7) 5' UTR (NM_001353800, exon 1 of 7) 200 NM_001353800 162993 Hs.665717 NM_001077624 ENSG00000196605 ZNF846 - zinc finger protein 846 protein-coding chr12-367 chr12 48957279 48957489 + 23.2 0.000 5' UTR (NM_001659, exon 1 of 5) 5' UTR (NM_001659, exon 1 of 5) 103 NM_001659 377 Hs.119177 NM_001659 ENSG00000134287 ARF3 - ADP ribosylation factor 3 protein-coding chr3-408 chr3 159805220 159805430 + 23.2 0.000 intron (NM_001197113, intron 5 of 10) intron (NM_001197113, intron 5 of 10) -34536 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr17-312 chr17 82212674 82212884 + 23.2 0.000 promoter-TSS (NM_001316321) promoter-TSS (NM_001316321) 63 NM_001367828 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr22-409 chr22 41688705 41688915 + 23.2 0.000 promoter-TSS (NM_005008) promoter-TSS (NM_005008) 57 NM_005008 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chr2-1078 chr2 65065130 65065340 + 23.2 0.000 intron (NR_134966, intron 1 of 5) L1ME4b|LINE|L1 8819 NM_015147 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr19-416 chr19 6460147 6460357 + 23.2 0.000 promoter-TSS (NM_024103) promoter-TSS (NM_024103) -460 NM_024103 79085 Hs.356231 NM_024103 ENSG00000125648 SLC25A23 APC2|MCSC2|SCaMC-3 solute carrier family 25 member 23 protein-coding chr10-383 chr10 113539775 113539985 + 23.2 0.000 Intergenic Intergenic -10951 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr10-597 chr10 14954278 14954488 + 23.2 0.000 promoter-TSS (NR_146962) promoter-TSS (NR_146962) 49 NR_146960 64421 Hs.655932 NM_022487 ENSG00000152457 DCLRE1C A-SCID|DCLREC1C|RS-SCID|SCIDA|SNM1C DNA cross-link repair 1C protein-coding chr10-568 chr10 70664794 70665004 + 23.2 0.000 Intergenic Intergenic -7607 NM_139155 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr20-186 chr20 63272661 63272871 + 23.2 0.000 promoter-TSS (NM_018209) promoter-TSS (NM_018209) -19 NM_001281483 55738 Hs.25584 NM_018209 ENSG00000101199 ARFGAP1 ARF1GAP|HRIHFB2281 ADP ribosylation factor GTPase activating protein 1 protein-coding chr12-897 chr12 108649819 108650029 + 23.2 0.000 intron (NM_001105237, intron 8 of 10) intron (NM_001105237, intron 8 of 10) 14114 NR_039717 100616240 NR_039717 ENSG00000284388 MIR4496 - microRNA 4496 ncRNA chr2-1025 chr2 25664819 25665029 + 23.2 0.000 intron (NM_033147, intron 1 of 19) intron (NM_033147, intron 1 of 19) 8653 NM_001351389 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr1-949 chr1 33176623 33176833 + 23.2 0.000 promoter-TSS (NM_001330483) promoter-TSS (NM_001330483) -178 NM_001330483 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr3-505 chr3 114383964 114384174 + 23.2 0.000 promoter-TSS (NM_001164342) promoter-TSS (NM_001164342) -427 NM_001164342 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr5-660 chr5 61408750 61408960 + 23.2 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 76597 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr5-568 chr5 77306103 77306313 + 23.2 0.000 intron (NM_001349749, intron 2 of 22) intron (NM_001349749, intron 2 of 22) 95528 NM_001029853 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr3-701 chr3 57943708 57943918 + 23.2 0.000 Intergenic Intergenic 53811 NM_001304422 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr17-363 chr17 82668666 82668876 + 23.2 0.000 promoter-TSS (NR_039751) promoter-TSS (NR_039751) -464 NR_039751 100616196 NR_039751 ENSG00000266107 MIR4525 - microRNA 4525 ncRNA chr9-991 chr9 7185650 7185860 + 23.2 0.000 Intergenic Intergenic 428405 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr2-1322 chr2 63666010 63666220 + 23.2 0.000 Intergenic Intergenic 76964 NM_001199112 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chr1-995 chr1 10599549 10599759 + 23.2 0.000 intron (NM_004565, intron 4 of 8) intron (NM_004565, intron 4 of 8) 124704 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr11-520 chr11 66568446 66568656 + 23.2 0.000 promoter-TSS (NM_003793) promoter-TSS (NM_003793) 55 NM_003793 8722 Hs.11590 NM_003793 ENSG00000174080 CTSF CATSF|CLN13 cathepsin F protein-coding chr7-367 chr7 74657508 74657718 + 23.2 0.000 promoter-TSS (NM_001280800) promoter-TSS (NM_001280800) -52 NM_001280800 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr7-361 chr7 75157056 75157266 + 23.2 0.000 intron (NR_003187, intron 10 of 10) CpG 14837 NR_003187 654817 Hs.647047 NR_003187 ENSG00000165178 NCF1C SH3PXD1C neutrophil cytosolic factor 1C pseudogene pseudo chr2-1084 chr2 133818246 133818456 + 23.2 0.000 Intergenic Intergenic -249888 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr13-392 chr13 43830368 43830578 + 23.2 0.000 Intergenic LTR16A2|LTR|ERVL -43501 NM_001347971 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr4-355 chr4 77862601 77862811 + 23.2 0.000 promoter-TSS (NM_020236) promoter-TSS (NM_020236) -124 NM_020236 65008 Hs.532019 NM_020236 ENSG00000169288 MRPL1 BM022|L1MT|MRP-L1 mitochondrial ribosomal protein L1 protein-coding chr20-180 chr20 63627206 63627416 + 23.2 0.000 promoter-TSS (NM_012384) promoter-TSS (NM_012384) 76 NR_132418 100505771 Hs.448392 NR_132417 ENSG00000232442 MHENCR - melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 ncRNA chr1-1150 chr1 22976590 22976800 + 23.2 0.000 Intergenic MIRb|SINE|MIR -3829 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr17-497 chr17 51056996 51057206 + 23.2 0.000 intron (NM_001130527, intron 2 of 29) intron (NM_001130527, intron 2 of 29) -10223 NM_001251971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr19-817 chr19 55087152 55087362 + 23.2 0.000 intron (NM_017729, intron 13 of 14) CpG-15149 6865 NM_017729 54869 Hs.438862 NM_017729 ENSG00000131037 EPS8L1 DRC3|EPS8R1|PP10566 EPS8 like 1 protein-coding chr2-760 chr2 217934639 217934849 + 23.2 0.000 intron (NM_022648, intron 1 of 32) intron (NM_022648, intron 1 of 32) 9326 NM_022648 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr10-745 chr10 6515431 6515641 + 23.2 0.000 intron (NM_001323265, intron 1 of 17) intron (NM_001323265, intron 1 of 17) 64740 NM_001323266 5588 Hs.498570 NM_006257 ENSG00000065675 PRKCQ PRKCT|nPKC-theta protein kinase C theta protein-coding chr12-431 chr12 95204431 95204641 + 23.2 0.000 intron (NM_018351, intron 2 of 20) intron (NM_018351, intron 2 of 20) 12931 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding chr11-350 chr11 64355104 64355314 + 23.2 0.000 exon (NM_032251, exon 25 of 27) exon (NM_032251, exon 25 of 27) -3953 NM_003942 8986 Hs.105584 NM_003942 ENSG00000162302 RPS6KA4 MSK2|RSK-B|S6K-alpha-4 ribosomal protein S6 kinase A4 protein-coding chr4-433 chr4 153677146 153677356 + 23.2 0.000 intron (NR_134873, intron 2 of 2) intron (NR_134873, intron 2 of 2) -7029 NM_001318790 7097 Hs.519033 NM_003264 ENSG00000137462 TLR2 CD282|TIL4 toll like receptor 2 protein-coding chr4-225 chr4 173370796 173371006 + 23.2 0.000 promoter-TSS (NM_003864) promoter-TSS (NM_003864) -53 NM_003864 8819 Hs.591715 NM_003864 ENSG00000164105 SAP30 - Sin3A associated protein 30 protein-coding chr6-311 chr6 8102345 8102555 + 23.2 0.000 promoter-TSS (NM_001135650) promoter-TSS (NM_001135650) 98 NM_001135650 9521 Hs.602353 NM_004280 ENSG00000124802 EEF1E1 AIMP3|P18 eukaryotic translation elongation factor 1 epsilon 1 protein-coding chr8-448 chr8 27836346 27836556 + 23.2 0.000 intron (NM_001278945, intron 1 of 7) L2a|LINE|L2 1366 NM_001363040 55872 Hs.104741 NM_018492 ENSG00000168078 PBK CT84|HEL164|Nori-3|SPK|TOPK PDZ binding kinase protein-coding chr8-215 chr8 144094661 144094871 + 23.2 0.000 promoter-TSS (NM_001916) promoter-TSS (NM_001916) -310 NM_001916 1537 Hs.289271 NM_001916 ENSG00000179091 CYC1 MC3DN6|UQCR4 cytochrome c1 protein-coding chr7-728 chr7 30169163 30169373 + 23.2 0.000 Intergenic Intergenic 34282 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr5-517 chr5 132883292 132883502 + 23.2 0.000 exon (NM_014423, exon 20 of 21) exon (NM_014423, exon 20 of 21) 9729 NM_052971 116842 Hs.337588 NM_052971 ENSG00000164406 LEAP2 LEAP-2 liver enriched antimicrobial peptide 2 protein-coding chr20-400 chr20 54123543 54123753 + 23.2 0.000 Intergenic Intergenic 50338 NM_001128915 1591 Hs.89663 NM_000782 ENSG00000019186 CYP24A1 CP24|CYP24|HCAI|HCINF1|P450-CC24 cytochrome P450 family 24 subfamily A member 1 protein-coding chr15-378 chr15 50227169 50227379 + 23.2 0.000 intron (NM_001159629, intron 6 of 8) intron (NM_001159629, intron 6 of 8) 38452 NM_001306146 3067 Hs.1481 NM_002112 ENSG00000140287 HDC - histidine decarboxylase protein-coding chr15-611 chr15 72591473 72591683 + 23.2 0.000 3' UTR (NM_005744, exon 14 of 14) 3' UTR (NM_005744, exon 14 of 14) 4361 NR_030359 693215 NR_030359 ENSG00000283798 MIR630 MIRN630|hsa-mir-630 microRNA 630 ncRNA chr1-645 chr1 16440644 16440854 + 23.2 0.000 promoter-TSS (NM_001145278) promoter-TSS (NM_001145278) 25 NM_018090 55707 Hs.437385 NM_018090 ENSG00000157191 NECAP2 - NECAP endocytosis associated 2 protein-coding chr6-428 chr6 37882735 37882945 + 23.2 0.000 intron (NM_021943, intron 1 of 5) intron (NM_021943, intron 1 of 5) 63113 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr22-275 chr22 17171644 17171854 + 23.2 0.000 Intergenic CpG -6462 NM_017829 27440 Hs.26890 NM_017829 ENSG00000069998 HDHD5 CECR5 haloacid dehalogenase like hydrolase domain containing 5 protein-coding chr2-470 chr2 96638171 96638381 + 23.2 0.000 promoter-TSS (NM_001349260) promoter-TSS (NM_001349260) 36 NM_001349261 55683 Hs.516341 NM_017991 ENSG00000114982 KANSL3 KIAA1310|NSL3|Rcd1 KAT8 regulatory NSL complex subunit 3 protein-coding chr22-274 chr22 43923809 43924019 + 23.2 0.000 exon (NM_025225, exon 1 of 9) exon (NM_025225, exon 1 of 9) 109 NM_025225 80339 Hs.654800 NM_025225 ENSG00000100344 PNPLA3 ADPN|C22orf20|iPLA(2)epsilon patatin like phospholipase domain containing 3 protein-coding chr6-330 chr6 16689155 16689365 + 23.2 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 70924 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr10-518 chr10 120851250 120851460 + 23.1 0.000 promoter-TSS (NR_033850) promoter-TSS (NR_033850) -7 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr15-265 chr15 41794132 41794342 + 23.1 0.000 intron (NR_049762, intron 2 of 28) AluSx1|SINE|Alu 19753 NR_049762 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr1-1589 chr1 36327452 36327662 + 23.1 0.000 Intergenic Intergenic -3403 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr17-672 chr17 28725202 28725412 + 23.1 0.000 TTS (NM_000984) TTS (NM_000984) 926 NM_138463 116238 Hs.499952 NM_138463 ENSG00000160606 TLCD1 - TLC domain containing 1 protein-coding chr17-1006 chr17 82859857 82860067 + 23.1 0.000 intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) -19940 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr14-243 chr14 31457336 31457546 + 23.1 0.000 promoter-TSS (NM_080664) promoter-TSS (NM_080664) 65 NM_080664 112487 Hs.116014 NM_080664 ENSG00000129480 DTD2 ATD|C14orf126 D-aminoacyl-tRNA deacylase 2 protein-coding chr14-432 chr14 52045302 52045512 + 23.1 0.000 intron (NM_007361, intron 5 of 21) intron (NM_007361, intron 5 of 21) 23652 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr6-817 chr6 105360073 105360283 + 23.1 0.000 intron (NM_002726, intron 6 of 14) LTR79|LTR|ERVL 42904 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr5-815 chr5 143087146 143087356 + 23.1 0.000 intron (NR_146198, intron 17 of 22) intron (NR_146198, intron 17 of 22) -105249 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr5-663 chr5 79235821 79236031 + 23.1 0.000 promoter-TSS (NM_152405) promoter-TSS (NM_152405) -205 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr1-1164 chr1 80417788 80417998 + 23.1 0.000 Intergenic AluJr|SINE|Alu -117862 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr7-643 chr7 42677906 42678116 + 23.1 0.000 intron (NR_110833, intron 1 of 2) intron (NR_110833, intron 1 of 2) 28436 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr13-350 chr13 113853681 113853891 + 23.1 0.000 intron (NM_000820, intron 2 of 14) intron (NM_000820, intron 2 of 14) 10290 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr10-162 chr10 121927918 121928128 + 23.1 0.000 promoter-TSS (NR_120495) promoter-TSS (NR_120495) 8 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr2-1046 chr2 137333667 137333877 + 23.1 0.000 intron (NM_001316349, intron 12 of 27) intron (NM_001316349, intron 12 of 27) 568227 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr11-847 chr11 130403384 130403594 + 23.1 0.000 non-coding (NR_148980, exon 7 of 7) non-coding (NR_148980, exon 7 of 7) 25120 NM_007037 11095 Hs.271605 NM_007037 ENSG00000134917 ADAMTS8 ADAM-TS8|METH2 ADAM metallopeptidase with thrombospondin type 1 motif 8 protein-coding chr1-842 chr1 43671908 43672118 + 23.1 0.000 intron (NM_014663, intron 11 of 21) intron (NM_014663, intron 11 of 21) 21864 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr3-363 chr3 16339146 16339356 + 23.1 0.000 non-coding (NR_148220, exon 11 of 11) non-coding (NR_148220, exon 11 of 11) 74039 NR_148220 92106 Hs.655449 NM_138381 ENSG00000154814 OXNAD1 - oxidoreductase NAD binding domain containing 1 protein-coding chr8-526 chr8 19642076 19642286 + 23.1 0.000 intron (NR_148898, intron 1 of 9) intron (NR_148898, intron 1 of 9) -39636 NM_001354491 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr12-481 chr12 1645040 1645250 + 23.1 0.000 intron (NM_032642, intron 4 of 4) intron (NM_032642, intron 4 of 4) 15235 NR_037422 100500816 NR_037422 ENSG00000266043 MIR3649 - microRNA 3649 ncRNA chr11-859 chr11 74820800 74821010 + 23.1 0.000 intron (NM_001098638, intron 4 of 5) MIRb|SINE|MIR 72056 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr18-41 chr18 23503298 23503508 + 23.1 0.000 promoter-TSS (NM_013326) promoter-TSS (NM_013326) -67 NM_001318707 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr1-2199 chr1 63441827 63442037 + 23.1 0.000 intron (NM_001347145, intron 7 of 7) intron (NM_001347145, intron 7 of 7) 74305 NM_013339 29929 Hs.258501 NM_013339 ENSG00000088035 ALG6 CDG1C ALG6 alpha-1,3-glucosyltransferase protein-coding chr2-1834 chr2 158495181 158495391 + 23.1 0.000 intron (NM_001005476, intron 1 of 20) L1M5|LINE|L1 38334 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr2-1195 chr2 144358117 144358327 + 23.1 0.000 Intergenic Intergenic -25153 NM_001354360 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr5-1385 chr5 113062333 113062543 + 23.1 0.000 intron (NM_001085377, intron 14 of 18) intron (NM_001085377, intron 14 of 18) 85640 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr5-300 chr5 134845853 134846063 + 23.1 0.000 promoter-TSS (NM_001300894) promoter-TSS (NM_001300894) -10 NM_001135586 134553 Hs.708536 NM_152409 ENSG00000181904 C5orf24 - chromosome 5 open reading frame 24 protein-coding chr22-601 chr22 37930843 37931053 + 23.1 0.000 intron (NM_033386, intron 9 of 15) MIR3|SINE|MIR 22653 NM_032561 84645 Hs.517612 NM_032561 ENSG00000128346 C22orf23 EVG1|dJ1039K5.6 chromosome 22 open reading frame 23 protein-coding chr2-477 chr2 17643189 17643399 + 23.1 0.000 intron (NM_001366805, intron 2 of 2) intron (NM_001366805, intron 2 of 2) 102598 NM_003385 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr14-510 chr14 74886040 74886250 + 23.1 0.000 intron (NM_001244883, intron 3 of 6) intron (NM_001244883, intron 3 of 6) 4229 NR_033814 1743 Hs.525459 NM_001933 ENSG00000119689 DLST DLTS dihydrolipoamide S-succinyltransferase protein-coding chr17-959 chr17 71189250 71189460 + 23.1 0.000 intron (NR_104152, intron 1 of 3) intron (NR_104152, intron 1 of 3) 12824 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr10-1063 chr10 109987521 109987731 + 23.1 0.000 intron (NR_038943, intron 2 of 4) intron (NR_038943, intron 2 of 4) -8747 NM_001320591 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr9-603 chr9 125137361 125137571 + 23.1 0.000 intron (NM_173690, intron 2 of 18) L2a|LINE|L2 6062 NM_001144877 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr4-587 chr4 54513323 54513533 + 23.1 0.000 Intergenic Intergenic 93703 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr22-441 chr22 30755393 30755603 + 23.1 0.000 intron (NM_030758, intron 2 of 13) intron (NM_030758, intron 2 of 13) -8755 NM_001282740 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr7-1297 chr7 46811658 46811868 + 23.1 0.000 Intergenic Intergenic -114641 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr1-788 chr1 38046999 38047209 + 23.1 0.000 promoter-TSS (NM_002699) promoter-TSS (NM_002699) -311 NM_002699 5453 Hs.1837 NM_002699 ENSG00000185668 POU3F1 OCT6|OTF6|SCIP POU class 3 homeobox 1 protein-coding chr10-1281 chr10 26882095 26882305 + 23.1 0.000 Intergenic Intergenic -21113 NM_001178120 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr19-783 chr19 49208250 49208460 + 23.1 0.000 intron (NM_001321281, intron 18 of 22) LTR13|LTR|ERVK 50563 NM_001195227 54795 Hs.467101 NM_017636 ENSG00000130529 TRPM4 LTrpC4|PFHB1B|TRPM4B|hTRPM4 transient receptor potential cation channel subfamily M member 4 protein-coding chr2-1133 chr2 45895542 45895752 + 23.1 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 243972 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr5-839 chr5 56711257 56711467 + 23.1 0.000 Intergenic L1PA16|LINE|L1 61509 NM_001365184 105378979 NM_001365184 LOC105378979 - growth/differentiation factor 3 protein-coding chr1-767 chr1 94884177 94884387 + 23.1 0.000 intron (NM_001258340, intron 12 of 14) intron (NM_001258340, intron 12 of 14) 41526 NM_001286056 1266 Hs.483454 NM_001839 ENSG00000117519 CNN3 - calponin 3 protein-coding chr12-488 chr12 71754815 71755025 + 23.1 0.000 promoter-TSS (NM_014999) promoter-TSS (NM_014999) 57 NM_014999 23011 Hs.524590 NM_014999 ENSG00000080371 RAB21 - RAB21, member RAS oncogene family protein-coding chr16-411 chr16 56519931 56520141 + 23.1 0.000 promoter-TSS (NM_031885) promoter-TSS (NM_031885) -12 NM_031885 583 Hs.333738 NM_031885 ENSG00000125124 BBS2 BBS|RP74 Bardet-Biedl syndrome 2 protein-coding chr5-816 chr5 150067311 150067521 + 23.1 0.000 intron (NM_001288705, intron 10 of 20) MIRb|SINE|MIR 19224 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr2-1574 chr2 43759202 43759412 + 23.1 0.000 intron (NM_172069, intron 27 of 29) (CATT)n|Simple_repeat|Simple_repeat -14732 NM_016008 51626 Hs.371597 NM_015522 ENSG00000138036 DYNC2LI1 CGI-60|D2LIC|LIC3 dynein cytoplasmic 2 light intermediate chain 1 protein-coding chr9-803 chr9 84371836 84372046 + 23.1 0.000 Intergenic Intergenic -3214 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding ML143367.1-1 ML143367.1 101306 101516 + 23.1 0.000 NA NA NA NA chr16-400 chr16 3500849 3501059 + 23.1 0.000 promoter-TSS (NM_001330454) promoter-TSS (NM_001330454) -50 NM_015041 23059 Hs.155995 NM_015041 ENSG00000103351 CLUAP1 CFAP22|FAP22|IFT38 clusterin associated protein 1 protein-coding chr5-102 chr5 139561224 139561434 + 23.1 0.000 promoter-TSS (NM_003339) promoter-TSS (NM_003339) -10 NM_003339 7322 Hs.108332 NM_003339 ENSG00000131508 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin conjugating enzyme E2 D2 protein-coding chr2-572 chr2 199911164 199911374 + 23.1 0.000 promoter-TSS (NM_153689) promoter-TSS (NM_153689) -24 NM_153689 205327 Hs.154494 NM_153689 ENSG00000178074 C2orf69 - chromosome 2 open reading frame 69 protein-coding chr16-362 chr16 3457750 3457960 + 23.1 0.000 promoter-TSS (NM_001317094) promoter-TSS (NM_001317094) -190 NM_001317098 79903 Hs.513296 NM_024845 ENSG00000122390 NAA60 HAT4|NAT15|NatF|hNaa60 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding chr22-238 chr22 42369262 42369472 + 23.1 0.000 promoter-TSS (NR_120595) promoter-TSS (NR_120595) -159 NR_120595 102723775 Hs.335413 NR_120595 ENSG00000229891 LINC01315 C22orf32-1|lnc-C22orf32-1 long intergenic non-protein coding RNA 1315 ncRNA chr8-916 chr8 130244289 130244499 + 23.1 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 52139 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr11-258 chr11 47269925 47270135 + 23.1 0.000 promoter-TSS (NM_001135943) promoter-TSS (NM_001135943) -103 NM_001135943 8567 Hs.82548 NM_003682 ENSG00000110514 MADD DENN|IG20|RAB3GEP MAP kinase activating death domain protein-coding chr12-605 chr12 51752510 51752720 + 23.1 0.000 intron (NM_001369788, intron 14 of 25) intron (NM_001369788, intron 14 of 25) 79302 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chr13-367 chr13 49258400 49258610 + 23.1 0.000 intron (NR_036439, intron 3 of 8) intron (NR_036439, intron 3 of 8) 10580 NM_030911 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr9-647 chr9 76654718 76654928 + 23.1 0.000 intron (NM_001308050, intron 2 of 10) intron (NM_001308050, intron 2 of 10) 37592 NM_001308050 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr1-2086 chr1 70760295 70760505 + 23.1 0.000 intron (NR_125938, intron 5 of 6) intron (NR_125938, intron 5 of 6) 53947 NR_125938 101927244 Hs.568660 NR_125938 ENSG00000229051 LINC01788 - long intergenic non-protein coding RNA 1788 ncRNA chr15-409 chr15 99719057 99719267 + 23.1 0.000 Intergenic L1MC4a|LINE|L1 14275 NM_001284419 145748 Hs.562568 NM_152449 ENSG00000183060 LYSMD4 - LysM domain containing 4 protein-coding chr8-746 chr8 42195235 42195445 + 23.1 0.000 intron (NM_001319189, intron 1 of 11) intron (NM_001319189, intron 1 of 11) 12225 NM_000930 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr1-586 chr1 64966323 64966533 + 23.1 0.000 5' UTR (NM_001321855, exon 1 of 26) 5' UTR (NM_001321855, exon 1 of 26) 121 NM_002227 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr12-455 chr12 53659041 53659251 + 23.1 0.000 Intergenic Intergenic 16273 NM_001330269 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr5-500 chr5 180785850 180786060 + 23.1 0.000 3' UTR (NM_001364381, exon 3 of 3) 3' UTR (NM_001364381, exon 3 of 3) 16851 NM_001364392 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr8-478 chr8 78516313 78516523 + 23.1 0.000 promoter-TSS (NM_006823) promoter-TSS (NM_006823) 78 NM_181839 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr2-784 chr2 121531170 121531380 + 23.1 0.000 TTS (NR_023343) TTS (NR_023343) 395 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr1-2093 chr1 93629653 93629863 + 23.1 0.000 intron (NM_001261409, intron 3 of 11) intron (NM_001261409, intron 3 of 11) -15661 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr19-399 chr19 1021160 1021370 + 23.1 0.000 promoter-TSS (NM_033420) promoter-TSS (NM_033420) -142 NM_033420 91304 Hs.515003 NM_033420 ENSG00000182087 TMEM259 ASBABP1|C19orf6|MBRL|MEMBRALIN|R32184_3 transmembrane protein 259 protein-coding chr12-775 chr12 121581103 121581313 + 23.1 0.000 promoter-TSS (NM_032590) promoter-TSS (NM_032590) -185 NM_032590 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr3-571 chr3 114145038 114145248 + 23.1 0.000 intron (NM_000796, intron 4 of 6) intron (NM_000796, intron 4 of 6) 33633 NM_001290809 1814 Hs.121478 NM_000796 ENSG00000151577 DRD3 D3DR|ETM1|FET1 dopamine receptor D3 protein-coding chr22-666 chr22 46314314 46314524 + 23.1 0.000 intron (NM_016426, intron 6 of 11) intron (NM_016426, intron 6 of 11) 17549 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding chr17-543 chr17 75430461 75430671 + 23.1 0.000 Intergenic Intergenic 24497 NR_037449 100500841 NR_037449 ENSG00000264511 MIR3678 mir-3678 microRNA 3678 ncRNA chr11-1345 chr11 32137405 32137615 + 23.1 0.000 Intergenic L2c|LINE|L2 6402 NR_132770 106635521 NR_132770 SNORA88 - small nucleolar RNA, H/ACA box 88 snoRNA chr7-275 chr7 129611503 129611713 + 23.1 0.000 promoter-TSS (NM_001293164) promoter-TSS (NM_001293164) -112 NM_001293163 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr10-677 chr10 118373842 118374052 + 23.1 0.000 Intergenic Intergenic 16839 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr3-600 chr3 5294410 5294620 + 23.1 0.000 Intergenic Intergenic -44260 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr22-312 chr22 21588216 21588426 + 23.1 0.000 intron (NR_046082, intron 1 of 3) L3|LINE|CR1 20607 NR_028436 7332 Hs.108104 NM_003347 ENSG00000185651 UBE2L3 E2-F1|L-UBC|UBCH7|UbcM4 ubiquitin conjugating enzyme E2 L3 protein-coding chr12-896 chr12 107708374 107708584 + 23.1 0.000 intron (NM_007062, intron 11 of 14) intron (NM_007062, intron 11 of 14) 22437 NM_001317962 11137 Hs.506652 NM_007062 ENSG00000136045 PWP1 IEF-SSP-9502 PWP1 homolog, endonuclein protein-coding KI270830.1-2 KI270830.1 15814 16024 + 23.1 0.000 NA NA NA NA chr1-835 chr1 945360 945570 + 23.1 0.000 TTS (NM_152486) TTS (NM_152486) 13791 NM_015658 26155 Hs.405987 NM_015658 ENSG00000188976 NOC2L NET15|NET7|NIR|PPP1R112 NOC2 like nucleolar associated transcriptional repressor protein-coding chr21-206 chr21 36097873 36098083 + 23.1 0.000 intron (NR_040084, intron 2 of 3) MER4B-int|LTR|ERV1 -6903 NR_147887 105369306 NR_147887 ENSG00000233393 LOC105369306 - uncharacterized LOC105369306 ncRNA chr6-416 chr6 133099654 133099864 + 23.1 0.000 intron (NR_026969, intron 2 of 3) intron (NR_026969, intron 2 of 3) 11679 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr13-400 chr13 97206146 97206356 + 23.1 0.000 Intergenic Intergenic -16038 NM_001306070 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr16-450 chr16 65044887 65045097 + 23.1 0.000 intron (NM_001797, intron 2 of 12) intron (NM_001797, intron 2 of 12) 77071 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr5-707 chr5 72066683 72066893 + 23.1 0.000 Intergenic MER102c|DNA|hAT-Charlie -40687 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr22-303 chr22 37563327 37563537 + 23.1 0.000 intron (NM_152243, intron 1 of 2) intron (NM_152243, intron 1 of 2) 2952 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr1-2258 chr1 201883839 201884049 + 23.1 0.000 3' UTR (NM_018085, exon 24 of 24) 3' UTR (NM_018085, exon 24 of 24) -4725 NR_030775 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr11-601 chr11 59680583 59680793 + 23.1 0.000 Intergenic L1MA6|LINE|L1 -11651 NM_152716 219988 Hs.591960 NM_152716 ENSG00000166889 PATL1 Pat1b|hPat1b PAT1 homolog 1, processing body mRNA decay factor protein-coding chr3-549 chr3 100914362 100914572 + 23.1 0.000 intron (NM_001349332, intron 2 of 35) intron (NM_001349332, intron 2 of 35) 79023 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr3-308 chr3 47522278 47522488 + 23.1 0.000 Intergenic Intergenic -8671 NM_001031703 54859 Hs.311100 NM_017713 ENSG00000163832 ELP6 C3orf75|TMEM103 elongator acetyltransferase complex subunit 6 protein-coding chr20-495 chr20 6591401 6591611 + 23.1 0.000 Intergenic Intergenic 144630 NR_146909 105372516 Hs.580741 NR_146909 LINC01713 - long intergenic non-protein coding RNA 1713 ncRNA chr15-330 chr15 75554849 75555059 + 23.1 0.000 intron (NM_002833, intron 1 of 12) intron (NM_002833, intron 1 of 12) 24361 NM_002833 5780 Hs.445775 NM_002833 ENSG00000169410 PTPN9 MEG2|PTPMEG2 protein tyrosine phosphatase non-receptor type 9 protein-coding chr7-657 chr7 123580918 123581128 + 23.1 0.000 intron (NR_111926, intron 3 of 7) intron (NR_111926, intron 3 of 7) 20628 NR_111926 4698 Hs.651219 NM_005000 ENSG00000128609 NDUFA5 B13|CI-13KD-B|CI-13kB|NUFM|UQOR13 NADH:ubiquinone oxidoreductase subunit A5 protein-coding chr11-561 chr11 73330669 73330879 + 23.1 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -21413 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr5-789 chr5 14154053 14154263 + 23.1 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 10816 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr2-1422 chr2 177998026 177998236 + 23.1 0.000 intron (NM_001077197, intron 3 of 20) intron (NM_001077197, intron 3 of 20) 74646 NM_016953 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr11-440 chr11 61792677 61792887 + 23.1 0.000 promoter-TSS (NM_004111) promoter-TSS (NM_004111) -129 NM_004111 2237 Hs.409065 NM_004111 ENSG00000168496 FEN1 FEN-1|MF1|RAD2 flap structure-specific endonuclease 1 protein-coding chr11-1326 chr11 107043771 107043981 + 23.1 0.000 Intergenic Intergenic -25400 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr16-714 chr16 20906698 20906908 + 23.1 0.000 intron (NR_161432, intron 2 of 3) intron (NR_161432, intron 2 of 3) 5541 NM_001369645 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr17-712 chr17 64202654 64202864 + 23.1 0.000 intron (NM_018469, intron 2 of 11) intron (NM_018469, intron 2 of 11) 27975 NM_001288733 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr16-821 chr16 71929106 71929316 + 23.0 0.000 TTS (NM_181536) TTS (NM_181536) 33680 NM_014761 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr12-243 chr12 49707467 49707677 + 23.0 0.000 promoter-TSS (NM_198900) promoter-TSS (NM_198900) -167 NM_175736 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr4-523 chr4 10033245 10033455 + 23.0 0.000 intron (NM_001001290, intron 1 of 12) intron (NM_001001290, intron 1 of 12) 6898 NM_001001290 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr19-630 chr19 48646498 48646708 + 23.0 0.000 promoter-TSS (NM_001217) promoter-TSS (NM_001217) -416 NR_136241 770 Hs.428446 NM_001217 ENSG00000063180 CA11 CA-RP|CA-RP II|CA-XI|CARP-2|CARPX1 carbonic anhydrase 11 protein-coding chr3-265 chr3 128650795 128651005 + 23.0 0.000 promoter-TSS (NM_002950) promoter-TSS (NM_002950) -82 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chr19-731 chr19 58154880 58155090 + 23.0 0.000 Intergenic CpG -4196 NM_024620 79673 Hs.458377 NM_024620 ENSG00000181894 ZNF329 - zinc finger protein 329 protein-coding chr20-81 chr20 25390841 25391051 + 23.0 0.000 promoter-TSS (NM_015600) promoter-TSS (NM_015600) -111 NM_015600 26090 Hs.441550 NM_015600 ENSG00000100997 ABHD12 ABHD12A|BEM46L2|C20orf22|PHARC|dJ965G21.2|hABHD12 abhydrolase domain containing 12 protein-coding chr17-492 chr17 18781131 18781341 + 23.0 0.000 promoter-TSS (NM_016078) promoter-TSS (NM_016078) 53 NM_016078 51030 Hs.87295 NM_016078 ENSG00000171928 TVP23B CGI-148|FAM18B|FAM18B1|NPD008|YDR084C trans-golgi network vesicle protein 23 homolog B protein-coding chr18-184 chr18 11326029 11326239 + 23.0 0.000 Intergenic AluSc8|SINE|Alu -128344 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr8-204 chr8 118951611 118951821 + 23.0 0.000 promoter-TSS (NM_001324095) promoter-TSS (NM_001324095) 169 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding chr4-233 chr4 140237770 140237980 + 23.0 0.000 Intergenic Intergenic -19433 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr6-473 chr6 34991182 34991392 + 23.0 0.000 intron (NM_015245, intron 9 of 23) intron (NM_015245, intron 9 of 23) 102032 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr10-818 chr10 93466429 93466639 + 23.0 0.000 intron (NM_013451, intron 1 of 53) intron (NM_013451, intron 1 of 53) 15800 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr3-465 chr3 196432508 196432718 + 23.0 0.000 promoter-TSS (NM_015562) promoter-TSS (NM_015562) -186 NM_015562 26043 Hs.518524 NM_015562 ENSG00000163960 UBXN7 UBXD7 UBX domain protein 7 protein-coding chr6-442 chr6 2989569 2989779 + 23.0 0.000 non-coding (NR_026856, exon 2 of 3) non-coding (NR_026856, exon 2 of 3) 1707 NR_026856 401232 Hs.720158 NM_207495 LINC01011 - long intergenic non-protein coding RNA 1011 ncRNA chr10-221 chr10 86711365 86711575 + 23.0 0.000 intron (NM_001368066, intron 10 of 14) CpG 42906 NM_001080116 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr17-328 chr17 50541961 50542171 + 23.0 0.000 exon (NM_017957, exon 10 of 10) exon (NM_017957, exon 10 of 10) -3312 NR_135675 105371824 Hs.683630 NR_135675 ENSG00000250286 LOC105371824 - uncharacterized LOC105371824 ncRNA chr3-1043 chr3 186790318 186790528 + 23.0 0.000 TTS (NM_001967) TTS (NM_001967) 2810 NR_002588 619568 Hs.743897 NR_002588 ENSG00000263776 SNORA4 ACA4 small nucleolar RNA, H/ACA box 4 snoRNA chr22-306 chr22 31753655 31753865 + 23.0 0.000 promoter-TSS (NM_001369903) promoter-TSS (NM_001369903) -208 NR_157126 9681 Hs.435022 NM_014662 ENSG00000100150 DEPDC5 DEP.5|FFEVF|FFEVF1 DEP domain containing 5 protein-coding chr11-697 chr11 62855994 62856204 + 23.0 0.000 promoter-TSS (NR_152575) promoter-TSS (NR_152575) -10 NM_002394 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr3-289 chr3 120596190 120596400 + 23.0 0.000 promoter-TSS (NM_001168331) promoter-TSS (NM_001168331) -41 NM_001168331 4710 Hs.304613 NM_004547 ENSG00000065518 NDUFB4 B15|CI-B15 NADH:ubiquinone oxidoreductase subunit B4 protein-coding chr13-179 chr13 98509435 98509645 + 23.0 0.000 intron (NM_001032296, intron 2 of 10) L1MB8|LINE|L1 12585 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr10-537 chr10 104317389 104317599 + 23.0 0.000 intron (NM_001272013, intron 1 of 1) intron (NM_001272013, intron 1 of 1) -5870 NR_120622 101927472 Hs.670333 NR_120622 ITPRIP-AS1 - ITPRIP antisense RNA 1 ncRNA chr15-572 chr15 96767801 96768011 + 23.0 0.000 Intergenic L2b|LINE|L2 13748 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr3-462 chr3 129226563 129226773 + 23.0 0.000 Intergenic MIRb|SINE|MIR -22938 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding chr7-412 chr7 78769020 78769230 + 23.0 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -239863 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr11-854 chr11 47886119 47886329 + 23.0 0.000 Intergenic Intergenic -37680 NM_015231 23279 Hs.643526 NM_015231 ENSG00000030066 NUP160 NPHS19 nucleoporin 160 protein-coding chr10-584 chr10 68956123 68956333 + 23.0 0.000 promoter-TSS (NM_004728) promoter-TSS (NM_004728) 58 NM_004728 9188 Hs.223141 NM_004728 ENSG00000165732 DDX21 GUA|GURDB|RH-II/GU|RH-II/GuA DExD-box helicase 21 protein-coding chr8-241 chr8 129984296 129984506 + 23.0 0.000 intron (NM_001353245, intron 1 of 13) intron (NM_001353245, intron 1 of 13) 24052 NR_049826 100847051 NR_049826 ENSG00000264653 MIR5194 mir-5194 microRNA 5194 ncRNA chr17-1242 chr17 1779956 1780166 + 23.0 0.000 3' UTR (NM_052928, exon 11 of 11) 3' UTR (NM_052928, exon 11 of 11) 8390 NM_001329905 5176 Hs.532768 NM_002615 ENSG00000132386 SERPINF1 EPC-1|OI12|OI6|PEDF|PIG35 serpin family F member 1 protein-coding chr7-629 chr7 73560105 73560315 + 23.0 0.000 Intergenic Intergenic -2520 NM_001197244 9275 Hs.647051 NM_001707 ENSG00000106635 BCL7B - BAF chromatin remodeling complex subunit BCL7B protein-coding chr2-445 chr2 210170633 210170843 + 23.0 0.000 intron (NM_001307976, intron 1 of 13) intron (NM_001307976, intron 1 of 13) 671 NM_001307976 151050 Hs.282260 NM_152519 ENSG00000144445 KANSL1L C2orf67|MSL1v2 KAT8 regulatory NSL complex subunit 1 like protein-coding chr16-389 chr16 71808903 71809113 + 23.0 0.000 promoter-TSS (NM_001030007) promoter-TSS (NM_001030007) -174 NM_001030007 164 Hs.461253 NM_001128 ENSG00000166747 AP1G1 ADTG|CLAPG1 adaptor related protein complex 1 subunit gamma 1 protein-coding chr8-517 chr8 130068026 130068236 + 23.0 0.000 intron (NM_001362925, intron 27 of 29) MER21-int|LTR|ERVL 16637 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr22-343 chr22 41048808 41049018 + 23.0 0.000 Intergenic Intergenic 24808 NR_132979 106635682 NR_132979 SNORD140 - small nucleolar RNA, C/D box 140 snoRNA chr3-618 chr3 159458106 159458316 + 23.0 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 175565 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr17-888 chr17 41777572 41777782 + 23.0 0.000 intron (NM_001352776, intron 1 of 15) intron (NM_001352776, intron 1 of 15) 8418 NM_001352777 3728 Hs.514174 NM_002230 ENSG00000173801 JUP CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr16-665 chr16 27703723 27703933 + 23.0 0.000 intron (NM_015202, intron 11 of 27) intron (NM_015202, intron 11 of 27) 15201 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr1-1765 chr1 10216474 10216684 + 23.0 0.000 intron (NM_001365952, intron 1 of 48) intron (NM_001365952, intron 1 of 48) 4963 NM_001365952 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr17-910 chr17 77208446 77208656 + 23.0 0.000 intron (NM_001143999, intron 13 of 16) intron (NM_001143999, intron 13 of 16) 23338 NM_001144001 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr18-151 chr18 3453769 3453979 + 23.0 0.000 promoter-TSS (NM_173211) promoter-TSS (NM_173211) 100 NM_173211 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr7-551 chr7 2018821 2019031 + 23.0 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 70126 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr17-807 chr17 1989253 1989463 + 23.0 0.000 intron (NM_178568, intron 1 of 1) L3|LINE|CR1 -28358 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr9-337 chr9 128771981 128772191 + 23.0 0.000 promoter-TSS (NM_006336) promoter-TSS (NM_006336) -159 NM_006336 10444 Hs.147950 NM_006336 ENSG00000160445 ZER1 C9orf60|ZYG|ZYG11BL zyg-11 related cell cycle regulator protein-coding chr6-478 chr6 57473111 57473321 + 23.0 0.000 intron (NM_000947, intron 7 of 13) intron (NM_000947, intron 7 of 13) 83084 NR_036097 100422884 NR_036097 ENSG00000212017 MIR548U - microRNA 548u ncRNA chr6-113 chr6 108261106 108261316 + 23.0 0.000 promoter-TSS (NM_001300928) promoter-TSS (NM_001300928) -171 NM_001300928 8724 Hs.12102 NM_003795 ENSG00000112335 SNX3 Grd19|MCOPS8|SDP3 sorting nexin 3 protein-coding chr14-111 chr14 102592428 102592638 + 23.0 0.000 promoter-TSS (NM_015156) promoter-TSS (NM_015156) -116 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr2-1024 chr2 23593290 23593500 + 23.0 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 208216 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr12-301 chr12 124989015 124989225 + 23.0 0.000 promoter-TSS (NM_032656) promoter-TSS (NM_032656) 11 NM_032656 57647 Hs.107382 NM_032656 ENSG00000150990 DHX37 DDX37|Dhr1 DEAH-box helicase 37 protein-coding chr20-212 chr20 34676492 34676702 + 23.0 0.000 intron (NM_080476, intron 1 of 11) intron (NM_080476, intron 1 of 11) 688 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr7-400 chr7 41472781 41472991 + 23.0 0.000 Intergenic Intergenic -221033 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr2-1264 chr2 38505865 38506075 + 23.0 0.000 intron (NR_110259, intron 1 of 4) LTR16B1|LTR|ERVL 9770 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chr17-968 chr17 81051015 81051225 + 23.0 0.000 intron (NM_001144888, intron 1 of 13) intron (NM_001144888, intron 1 of 13) 15969 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding chr9-859 chr9 33287161 33287371 + 23.0 0.000 Intergenic LTR41|LTR|ERVL -3250 NM_001318758 4799 Hs.413074 NM_002504 ENSG00000086102 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding chr7-370 chr7 128476731 128476941 + 23.0 0.000 exon (NM_018396, exon 1 of 9) exon (NM_018396, exon 1 of 9) 107 NM_018396 55798 Hs.433213 NM_018396 ENSG00000165055 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding chr8-556 chr8 51667702 51667912 + 23.0 0.000 intron (NM_144651, intron 1 of 22) intron (NM_144651, intron 1 of 22) 141638 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr15-310 chr15 79853615 79853825 + 23.0 0.000 intron (NR_037654, intron 2 of 2) intron (NR_037654, intron 2 of 2) 43277 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr10-442 chr10 71319491 71319701 + 23.0 0.000 5' UTR (NM_001363518, exon 1 of 6) 5' UTR (NM_001363518, exon 1 of 6) 337 NM_018344 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr5-776 chr5 116085237 116085447 + 23.0 0.000 promoter-TSS (NR_146219) promoter-TSS (NR_146219) 64 NR_146219 51397 Hs.483136 NM_016144 ENSG00000145781 COMMD10 PTD002 COMM domain containing 10 protein-coding chr2-262 chr2 165953752 165953962 + 23.0 0.000 promoter-TSS (NM_024753) promoter-TSS (NM_024753) -81 NM_024753 79809 Hs.310672 NM_024753 ENSG00000123607 TTC21B ATD4|IFT139|IFT139B|JBTS11|NPHP12|Nbla10696|SRTD4|THM1 tetratricopeptide repeat domain 21B protein-coding chr3-396 chr3 40309520 40309730 + 23.0 0.000 promoter-TSS (NR_033965) promoter-TSS (NR_033965) 73 NR_033965 440952 Hs.660388 NR_033965 ENSG00000280739 EIF1B-AS1 - EIF1B antisense RNA 1 ncRNA chr11-1410 chr11 24239242 24239452 + 23.0 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -257706 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr13-204 chr13 33487843 33488053 + 23.0 0.000 intron (NM_001243476, intron 4 of 17) L2c|LINE|L2 -152682 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr6-1037 chr6 157515059 157515269 + 23.0 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) -13968 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr1-1933 chr1 13775663 13775873 + 23.0 0.000 intron (NM_001007257, intron 2 of 3) intron (NM_001007257, intron 2 of 3) 26353 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr3-490 chr3 184565868 184566078 + 23.0 0.000 intron (NM_004443, intron 1 of 15) intron (NM_004443, intron 1 of 15) 4188 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr16-570 chr16 57299973 57300183 + 23.0 0.000 Intergenic Intergenic -15406 NM_015993 51090 Hs.632215 NM_015993 ENSG00000102934 PLLP PMLP|TM4SF11 plasmolipin protein-coding chr5-407 chr5 41869743 41869953 + 23.0 0.000 promoter-TSS (NR_046635) promoter-TSS (NR_046635) -182 NR_046635 100874002 Hs.375537 NR_046635 ENSG00000248668 OXCT1-AS1 - OXCT1 antisense RNA 1 ncRNA chr18-413 chr18 47878007 47878217 + 23.0 0.000 intron (NM_001003652, intron 2 of 10) intron (NM_001003652, intron 2 of 10) 52547 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr15-406 chr15 73992182 73992392 + 23.0 0.000 promoter-TSS (NM_001256672) promoter-TSS (NM_001256672) 8 NM_001256675 9399 Hs.194816 NM_004809 ENSG00000067221 STOML1 SLP-1|STORP|hUNC-24 stomatin like 1 protein-coding chr4-519 chr4 169612408 169612618 + 23.0 0.000 promoter-TSS (NM_001199398) promoter-TSS (NM_001199398) 70 NM_001199398 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr7-773 chr7 54859644 54859854 + 23.0 0.000 Intergenic LTR16B2|LTR|ERVL 100436 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr12-583 chr12 120466610 120466820 + 23.0 0.000 intron (NM_003769, intron 1 of 3) AluJo|SINE|Alu 3033 NM_003769 8683 Hs.706889 NM_003769 ENSG00000111786 SRSF9 SFRS9|SRp30c serine and arginine rich splicing factor 9 protein-coding chr11-740 chr11 59566128 59566338 + 23.0 0.000 Intergenic Intergenic 28925 NR_036120 100422880 NR_036120 ENSG00000264559 MIR3162 mir-3162 microRNA 3162 ncRNA chr2-937 chr2 200747774 200747984 + 23.0 0.000 intron (NR_135012, intron 10 of 30) intron (NR_135012, intron 10 of 30) -12702 NR_037886 100507140 Hs.382116 NR_037886 ENSG00000237166 LINC01792 - long intergenic non-protein coding RNA 1792 ncRNA chr16-315 chr16 89657796 89658006 + 23.0 0.000 promoter-TSS (NM_002768) promoter-TSS (NM_002768) 97 NM_001271908 124045 Hs.655171 NM_153025 ENSG00000167523 SPATA33 C16orf55 spermatogenesis associated 33 protein-coding chr6-480 chr6 76792294 76792504 + 23.0 0.000 Intergenic Intergenic -198776 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr17-1007 chr17 814651 814861 + 23.0 0.000 intron (NM_001205319, intron 5 of 7) FLAM_C|SINE|Alu 32403 NM_001317947 55178 Hs.182729 NM_018146 ENSG00000171861 MRM3 RMTL1|RNMTL1 mitochondrial rRNA methyltransferase 3 protein-coding chr6-257 chr6 78867359 78867569 + 23.0 0.000 promoter-TSS (NM_001010844) promoter-TSS (NM_001010844) -87 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chr3-799 chr3 184657430 184657640 + 23.0 0.000 Intergenic AluJr|SINE|Alu 54529 NM_022149 64110 Hs.306123 NM_022149 ENSG00000177383 MAGEF1 MAGE-F1 MAGE family member F1 protein-coding chr19-578 chr19 5048803 5049013 + 23.0 0.000 intron (NM_001370094, intron 6 of 10) intron (NM_001370094, intron 6 of 10) 79795 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr19-742 chr19 17747547 17747757 + 23.0 0.000 promoter-TSS (NM_001161358) promoter-TSS (NM_001161358) -92 NM_001161358 23149 Hs.96485 NM_015122 ENSG00000130475 FCHO1 - FCH domain only 1 protein-coding chr7-827 chr7 55538601 55538811 + 23.0 0.000 promoter-TSS (NM_001284284) promoter-TSS (NM_001284284) -39 NM_001284283 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr6-883 chr6 83199909 83200119 + 23.0 0.000 Intergenic ERVL-E-int|LTR|ERVL -6114 NM_001199917 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr12-493 chr12 123584320 123584530 + 23.0 0.000 promoter-TSS (NM_001321445) promoter-TSS (NM_001321445) -98 NR_110049 101927415 Hs.636524 NR_110049 TMED2-DT - TMED2 divergent transcript ncRNA chrX-239 chrX 120548982 120549192 + 23.0 0.000 intron (NM_001369145, intron 2 of 19) intron (NM_001369145, intron 2 of 19) 10811 NM_001369145 8450 Hs.102914 NM_003588 ENSG00000158290 CUL4B CUL-4B|MRXHF2|MRXS15|MRXSC|SFM2 cullin 4B protein-coding chr16-278 chr16 57480342 57480552 + 23.0 0.000 promoter-TSS (NM_001369621) promoter-TSS (NM_001369621) -70 NM_001369620 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr19-1065 chr19 42820087 42820297 + 23.0 0.000 Intergenic Intergenic -1671 NR_036584 100289650 Hs.680622 NR_036584 ENSG00000225877 PSG8-AS1 - PSG8 antisense RNA 1 ncRNA chr14-173 chr14 96269162 96269372 + 23.0 0.000 Intergenic Intergenic 13057 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr14-502 chr14 45679948 45680158 + 23.0 0.000 Intergenic Intergenic 35549 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr17-1437 chr17 8479614 8479824 + 23.0 0.000 intron (NM_001256012, intron 40 of 42) intron (NM_001256012, intron 40 of 42) 43835 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr20-192 chr20 33489779 33489989 + 23.0 0.000 promoter-TSS (NM_001032999) promoter-TSS (NM_001032999) -212 NM_001032999 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr1-881 chr1 19328564 19328774 + 23.0 0.000 non-coding (NR_109848, exon 9 of 10) non-coding (NR_109848, exon 9 of 10) 16343 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr11-690 chr11 75820703 75820913 + 23.0 0.000 intron (NM_003369, intron 1 of 14) AluJb|SINE|Alu 5598 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr9-821 chr9 86283049 86283259 + 23.0 0.000 promoter-TSS (NM_030940) promoter-TSS (NM_030940) -616 NM_030940 81689 Hs.449291 NM_030940 ENSG00000135070 ISCA1 HBLD2|ISA1|MMDS5|hIscA iron-sulfur cluster assembly 1 protein-coding chr20-350 chr20 17937187 17937397 + 23.0 0.000 Intergenic Intergenic 25654 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr22-267 chr22 20437056 20437266 + 23.0 0.000 intron (NM_182895, intron 1 of 10) CpG 664 NM_182895 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chr10-744 chr10 107442130 107442340 + 23.0 0.000 Intergenic Intergenic -277529 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr7-204 chr7 54933286 54933496 + 22.9 0.000 Intergenic CpG -85626 NM_201284 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr1-1218 chr1 1346411 1346621 + 22.9 0.000 intron (NM_004421, intron 1 of 14) intron (NM_004421, intron 1 of 14) 2902 NM_001330311 1855 Hs.731450 NM_004421 ENSG00000107404 DVL1 DRS2|DVL|DVL1L1|DVL1P1 dishevelled segment polarity protein 1 protein-coding chr12-664 chr12 116557425 116557635 + 22.9 0.000 Intergenic Intergenic -1851 NM_001085481 643246 Hs.356061 NM_001085481 ENSG00000258102 MAP1LC3B2 ATG8G microtubule associated protein 1 light chain 3 beta 2 protein-coding chr12-369 chr12 51895080 51895290 + 22.9 0.000 Intergenic Intergenic 7082 NM_001130015 341405 Hs.433492 NM_182608 ENSG00000167612 ANKRD33 C12orf7|PANKY ankyrin repeat domain 33 protein-coding chr9-880 chr9 99019890 99020100 + 22.9 0.000 intron (NM_001855, intron 11 of 41) intron (NM_001855, intron 11 of 41) 76088 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr1-1275 chr1 87224342 87224552 + 22.9 0.000 intron (NM_001290053, intron 2 of 3) MIR|SINE|MIR 11778 NM_001290053 101927844 Hs.694591 NM_001290053 LINC02801 - long intergenic non-protein coding RNA 2801 protein-coding chr14-749 chr14 68911757 68911967 + 22.9 0.000 intron (NM_001102, intron 4 of 20) intron (NM_001102, intron 4 of 20) 67440 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr1-2007 chr1 48236877 48237087 + 22.9 0.000 intron (NM_001135181, intron 11 of 14) intron (NM_001135181, intron 11 of 14) 14266 NM_001135181 200010 Hs.37890 NM_001011547 ENSG00000117834 SLC5A9 SGLT4 solute carrier family 5 member 9 protein-coding chr11-974 chr11 65363775 65363985 + 22.9 0.000 Intergenic Intergenic 9129 NM_145719 220359 Hs.632121 NM_145719 ENSG00000173825 TIGD3 - tigger transposable element derived 3 protein-coding chr8-302 chr8 38734723 38734933 + 22.9 0.000 intron (NR_148047, intron 1 of 1) intron (NR_148047, intron 1 of 1) 6246 NM_001352788 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr11-782 chr11 130908930 130909140 + 22.9 0.000 intron (NR_144939, intron 4 of 11) intron (NR_144939, intron 4 of 11) 7452 NM_001347923 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr12-399 chr12 1631183 1631393 + 22.9 0.000 intron (NM_032642, intron 1 of 4) intron (NM_032642, intron 1 of 4) 2057 NM_032642 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr10-805 chr10 61923500 61923710 + 22.9 0.000 intron (NM_032199, intron 2 of 9) L2b|LINE|L2 21906 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr12-315 chr12 49903806 49904016 + 22.9 0.000 promoter-TSS (NM_012306) promoter-TSS (NM_012306) -11 NM_012306 23017 Hs.567424 NM_012306 ENSG00000135472 FAIM2 LFG|LFG2|NGP35|NMP35|TMBIM2 Fas apoptotic inhibitory molecule 2 protein-coding chr13-276 chr13 94641602 94641812 + 22.9 0.000 Intergenic Intergenic 39850 NM_180989 160897 Hs.439363 NM_180989 ENSG00000152749 GPR180 ITR G protein-coupled receptor 180 protein-coding chr5-730 chr5 149828578 149828788 + 22.9 0.000 intron (NM_001172698, intron 3 of 10) L2a|LINE|L2 56743 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr2-674 chr2 193374 193584 + 22.9 0.000 Intergenic Intergenic 62861 NM_001282687 26751 Hs.515951 NM_015677 ENSG00000035115 SH3YL1 RAY SH3 and SYLF domain containing 1 protein-coding chr1-810 chr1 28972575 28972785 + 22.9 0.000 intron (NM_001166006, intron 1 of 14) AluJo|SINE|Alu 58104 NM_001166006 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr19-1103 chr19 1940812 1941022 + 22.9 0.000 promoter-TSS (NM_001319) promoter-TSS (NM_001319) -255 NM_001319 1455 Hs.651905 NM_001319 ENSG00000133275 CSNK1G2 CK1g2 casein kinase 1 gamma 2 protein-coding chr13-341 chr13 42728911 42729121 + 22.9 0.000 Intergenic Intergenic -52534 NM_182508 144809 Hs.16970 NM_182508 ENSG00000179813 FAM216B C13orf30 family with sequence similarity 216 member B protein-coding chr22-174 chr22 50185713 50185923 + 22.9 0.000 promoter-TSS (NM_001320485) promoter-TSS (NM_001320485) -95 NM_001320485 80305 Hs.517731 NM_025204 ENSG00000170638 TRABD LP6054|PP2447 TraB domain containing protein-coding chr18-243 chr18 54712353 54712563 + 22.9 0.000 Intergenic Intergenic -116019 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr11-820 chr11 62665095 62665305 + 22.9 0.000 promoter-TSS (NR_104414) promoter-TSS (NR_104414) 16 NR_104414 102288414 Hs.9061 NM_001286086 ENSG00000278615 C11orf98 C11orf48 chromosome 11 open reading frame 98 protein-coding chr5-1003 chr5 77067145 77067355 + 22.9 0.000 Intergenic L2b|LINE|L2 13321 NR_003014 677828 Hs.693249 NR_003014 ENSG00000238961 SNORA47 HBI-115 small nucleolar RNA, H/ACA box 47 snoRNA chr8-497 chr8 74761455 74761665 + 22.9 0.000 Intergenic Intergenic 55867 NR_031744 100302260 NR_031744 ENSG00000283188 MIR2052 hsa-mir-2052 microRNA 2052 ncRNA chr22-438 chr22 29093708 29093918 + 22.9 0.000 intron (NM_001039570, intron 1 of 8) intron (NM_001039570, intron 1 of 8) 20778 NM_032045 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 ECTD13|KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr17-796 chr17 40100558 40100768 + 22.9 0.000 promoter-TSS (NM_021724) promoter-TSS (NM_021724) -74 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|REVERBA|REVERBalpha|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr2-1168 chr2 214808868 214809078 + 22.9 0.000 intron (NM_001282545, intron 1 of 6) intron (NM_001282545, intron 1 of 6) 710 NM_001282543 580 Hs.591642 NM_000465 ENSG00000138376 BARD1 - BRCA1 associated RING domain 1 protein-coding chr1-1204 chr1 154001679 154001889 + 22.9 0.000 exon (NM_207308, exon 36 of 40) exon (NM_207308, exon 36 of 40) 11022 NM_001030 6232 Hs.546291 NM_001030 ENSG00000177954 RPS27 DBA17|MPS-1|MPS1|S27 ribosomal protein S27 protein-coding chr16-753 chr16 19831749 19831959 + 22.9 0.000 intron (NR_130968, intron 8 of 8) intron (NR_130968, intron 8 of 8) 52994 NM_016235 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chr3-926 chr3 54279446 54279656 + 22.9 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 156999 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr20-145 chr20 347673 347883 + 22.9 0.000 promoter-TSS (NM_001323685) promoter-TSS (NM_001323685) -127 NM_001323685 80023 Hs.416024 NM_024958 ENSG00000125841 NRSN2 C20orf98|dJ1103G7.6 neurensin 2 protein-coding chr16-183 chr16 2474926 2475136 + 22.9 0.000 promoter-TSS (NM_001199107) promoter-TSS (NM_001199107) -96 NM_020705 57465 Hs.353087 NM_020705 ENSG00000162065 TBC1D24 DFNA65|DFNB86|DOORS|EIEE16|FIME|TLDC6 TBC1 domain family member 24 protein-coding chr3-552 chr3 123799793 123800003 + 22.9 0.000 intron (NM_001321309, intron 3 of 32) intron (NM_001321309, intron 3 of 32) 84434 NM_053025 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr19-744 chr19 29213050 29213260 + 22.9 0.000 promoter-TSS (NM_006003) promoter-TSS (NM_006003) -4 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr10-1013 chr10 588366 588576 + 22.9 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -40093 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr19-1096 chr19 49817413 49817623 + 22.9 0.000 promoter-TSS (NM_030973) promoter-TSS (NM_030973) -761 NM_030973 81857 Hs.656639 NM_030973 ENSG00000104973 MED25 ACID1|ARC92|BVSYS|CMT2B2|P78|PTOV2|TCBAP0758 mediator complex subunit 25 protein-coding chr15-685 chr15 95932759 95932969 + 22.9 0.000 Intergenic Intergenic 194977 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr13-230 chr13 97222120 97222330 + 22.9 0.000 promoter-TSS (NM_001306070) promoter-TSS (NM_001306070) -64 NM_001306070 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr18-202 chr18 41144519 41144729 + 22.9 0.000 Intergenic MER44C|DNA|TcMar-Tigger 376053 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr1-991 chr1 224203291 224203501 + 22.9 0.000 Intergenic Intergenic 9883 NR_110669 101927143 Hs.638720 NR_110669 ENSG00000232628 LOC101927143 - uncharacterized LOC101927143 ncRNA chrX-144 chrX 68060729 68060939 + 22.9 0.000 intron (NM_002547, intron 21 of 24) intron (NM_002547, intron 21 of 24) 372661 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr17-949 chr17 39164694 39164904 + 22.9 0.000 intron (NM_001143968, intron 2 of 5) intron (NM_001143968, intron 2 of 5) 1362 NM_001143968 390790 Hs.568007 NM_001143968 ENSG00000141748 ARL5C ARL12 ADP ribosylation factor like GTPase 5C protein-coding chr17-1332 chr17 18025614 18025824 + 22.9 0.000 intron (NM_145691, intron 4 of 7) intron (NM_145691, intron 4 of 7) 13449 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr4-410 chr4 2761975 2762185 + 22.9 0.000 Intergenic Intergenic -5744 NM_024309 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr1-880 chr1 16984782 16984992 + 22.9 0.000 Intergenic Intergenic -3301 NM_017459 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr1-1287 chr1 212721588 212721798 + 22.9 0.000 Intergenic Intergenic -21853 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr14-410 chr14 89601075 89601285 + 22.9 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 17985 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr12-182 chr12 50057531 50057741 + 22.9 0.000 promoter-TSS (NR_046389) promoter-TSS (NR_046389) 40 NR_046389 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr10-453 chr10 12419454 12419664 + 22.9 0.000 intron (NM_001351032, intron 3 of 11) intron (NM_001351032, intron 3 of 11) 30577 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr22-270 chr22 35257471 35257681 + 22.9 0.000 promoter-TSS (NR_027780) promoter-TSS (NR_027780) 83 NR_027780 10042 Hs.588815 NM_005487 ENSG00000100281 HMGXB4 HMG2L1|HMGBCG|THC211630 HMG-box containing 4 protein-coding chr2-1344 chr2 191366319 191366529 + 22.9 0.000 intron (NM_012223, intron 11 of 28) intron (NM_012223, intron 11 of 28) 121020 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr20-303 chr20 40279532 40279742 + 22.9 0.000 Intergenic Intergenic 275176 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr1-1099 chr1 150926077 150926287 + 22.9 0.000 promoter-TSS (NM_012432) promoter-TSS (NM_012432) -81 NM_001366417 9869 Hs.643565 NM_012432 ENSG00000143379 SETDB1 ESET|H3-K9-HMTase4|KG1T|KMT1E|TDRD21 SET domain bifurcated histone lysine methyltransferase 1 protein-coding chr1-789 chr1 39901149 39901359 + 22.9 0.000 exon (NM_001033081, exon 1 of 2) exon (NM_001033081, exon 1 of 2) 663 NM_001033081 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 MYCL proto-oncogene, bHLH transcription factor protein-coding chr8-730 chr8 114512655 114512865 + 22.9 0.000 Intergenic L1MEb|LINE|L1 -1075821 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr10-748 chr10 33238036 33238246 + 22.9 0.000 intron (NM_001244973, intron 6 of 16) intron (NM_001244973, intron 6 of 16) 96526 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr15-464 chr15 57890482 57890692 + 22.9 0.000 Intergenic L2a|LINE|L2 123436 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr3-297 chr3 39146984 39147194 + 22.9 0.000 intron (NM_001320560, intron 1 of 4) intron (NM_001320560, intron 1 of 4) 341 NM_001320559 64651 Hs.370950 NM_033027 ENSG00000144655 CSRNP1 AXUD1|CSRNP-1|FAM130B|TAIP-3|URAX1 cysteine and serine rich nuclear protein 1 protein-coding chr20-258 chr20 33647803 33648013 + 22.9 0.000 3' UTR (NM_001032999, exon 11 of 11) 3' UTR (NM_001032999, exon 11 of 11) -14419 NM_080825 128864 Hs.324104 NM_080825 ENSG00000149609 C20orf144 dJ63M2.6 chromosome 20 open reading frame 144 protein-coding chr1-425 chr1 778697 778907 + 22.9 0.000 promoter-TSS (NR_033908) promoter-TSS (NR_033908) -114 NR_033908 100288069 Hs.527521 NR_033908 LOC100288069 - uncharacterized LOC100288069 ncRNA chr8-759 chr8 124814950 124815160 + 22.9 0.000 Intergenic L2c|LINE|L2 -6930 NR_039806 100616221 NR_039806 ENSG00000283609 MIR4662A - microRNA 4662a ncRNA chr12-752 chr12 47882002 47882212 + 22.9 0.000 intron (NM_001017535, intron 3 of 10) intron (NM_001017535, intron 3 of 10) 22887 NM_000376 7421 Hs.524368 NM_000376 ENSG00000111424 VDR NR1I1|PPP1R163 vitamin D receptor protein-coding chr2-765 chr2 3650999 3651209 + 22.9 0.000 Intergenic CpG -7096 NM_018436 55821 Hs.97899 NM_018436 ENSG00000151360 ALLC ALC allantoicase protein-coding chr5-418 chr5 154285752 154285962 + 22.9 0.000 intron (NM_198321, intron 1 of 11) L2b|LINE|L2 -61249 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr1-1636 chr1 175016372 175016582 + 22.9 0.000 intron (NR_037606, intron 2 of 2) L4_A_Mam|LINE|RTE-X 6948 NM_022100 63931 Hs.654858 NM_022100 ENSG00000120333 MRPS14 COXPD38|DJ262D12.2|HSMRPS14|MRP-S14|S14mt mitochondrial ribosomal protein S14 protein-coding chr5-770 chr5 65879755 65879965 + 22.9 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -46694 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr1-1402 chr1 223707307 223707517 + 22.9 0.000 intron (NM_001146068, intron 1 of 20) intron (NM_001146068, intron 1 of 20) -5127 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr13-217 chr13 97947306 97947516 + 22.9 0.000 Intergenic Intergenic -6264 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr9-919 chr9 131641712 131641922 + 22.9 0.000 intron (NM_198679, intron 4 of 23) intron (NM_198679, intron 4 of 23) 68025 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr7-786 chr7 2019912 2020122 + 22.9 0.000 intron (NM_001013837, intron 12 of 18) MIRc|SINE|MIR 69035 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr17-557 chr17 6752618 6752828 + 22.9 0.000 Intergenic Intergenic -2724 NM_001353135 54739 Hs.441975 NM_017523 ENSG00000132530 XAF1 BIRC4BP|HSXIAPAF1|XIAPAF1 XIAP associated factor 1 protein-coding chr20-42 chr20 62929270 62929480 + 22.9 0.000 intron (NM_022105, intron 1 of 5) CpG -2824 NM_080796 11083 Hs.517172 NM_022105 ENSG00000101191 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding chr8-605 chr8 142662248 142662458 + 22.9 0.000 3' UTR (NM_003724, exon 2 of 2) 3' UTR (NM_003724, exon 2 of 2) 7614 NM_001077527 8629 Hs.535903 NM_003724 ENSG00000234616 JRK JH8|jerky Jrk helix-turn-helix protein protein-coding chr5-845 chr5 72348015 72348225 + 22.9 0.000 intron (NM_001284405, intron 7 of 8) Plat_L3|LINE|CR1 27747 NM_001284403 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr2-321 chr2 27428355 27428565 + 22.9 0.000 promoter-TSS (NM_013392) promoter-TSS (NM_013392) -171 NM_001321361 29959 Hs.515876 NM_013392 ENSG00000115216 NRBP1 BCON3|MADM|MUDPNP|NRBP nuclear receptor binding protein 1 protein-coding chr9-510 chr9 136438557 136438767 + 22.9 0.000 exon (NM_019892, exon 1 of 10) exon (NM_019892, exon 1 of 10) 1183 NM_001318502 56623 Hs.120998 NM_019892 ENSG00000148384 INPP5E CORS1|CPD4|JBTS1|MORMS|PPI5PIV|pharbin inositol polyphosphate-5-phosphatase E protein-coding chr4-697 chr4 41160189 41160399 + 22.9 0.000 intron (NM_173075, intron 1 of 16) intron (NM_173075, intron 1 of 16) 54248 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr1-792 chr1 150321369 150321579 + 22.9 0.000 promoter-TSS (NR_146766) promoter-TSS (NR_146766) 6 NR_146769 9129 Hs.11776 NM_004698 ENSG00000117360 PRPF3 HPRP3|HPRP3P|PRP3|Prp3p|RP18|SNRNP90 pre-mRNA processing factor 3 protein-coding chr19-1336 chr19 6220537 6220747 + 22.9 0.000 intron (NM_005934, intron 6 of 11) intron (NM_005934, intron 6 of 11) 59333 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr12-1262 chr12 52753168 52753378 + 22.9 0.000 Intergenic Intergenic 24072 NM_015848 51350 Hs.654392 NM_015848 ENSG00000185069 KRT76 HUMCYT2A|KRT2B|KRT2P keratin 76 protein-coding chr11-319 chr11 65314736 65314946 + 22.9 0.000 promoter-TSS (NM_006779) promoter-TSS (NM_006779) -25 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr5-534 chr5 72141648 72141858 + 22.9 0.000 intron (NM_005909, intron 2 of 6) intron (NM_005909, intron 2 of 6) -27714 NR_039967 100616377 NR_039967 ENSG00000264099 MIR4803 - microRNA 4803 ncRNA chr8-504 chr8 134162473 134162683 + 22.9 0.000 Intergenic L2b|LINE|L2 276082 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr7-966 chr7 1625305 1625515 + 22.9 0.000 Intergenic Intergenic 10940 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr14-380 chr14 102055717 102055927 + 22.9 0.000 3' UTR (NM_001376, exon 78 of 78) 3' UTR (NM_001376, exon 78 of 78) 31222 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr18-40 chr18 50967936 50968146 + 22.9 0.000 promoter-TSS (NM_018696) promoter-TSS (NM_018696) 1 NM_018696 55520 Hs.657360 NM_018696 ENSG00000141642 ELAC1 D29 elaC ribonuclease Z 1 protein-coding chr12-834 chr12 63294273 63294483 + 22.9 0.000 Intergenic Intergenic -141568 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr8-285 chr8 27617207 27617417 + 22.9 0.000 Intergenic L3b|LINE|CR1 -2612 NM_001831 1191 Hs.436657 NM_001831 ENSG00000120885 CLU AAG4|APO-J|APOJ|CLI|CLU1|CLU2|KUB1|NA1/NA2|SGP-2|SGP2|SP-40|TRPM-2|TRPM2 clusterin protein-coding chr1-1318 chr1 148388767 148388977 + 22.9 0.000 TTS (NR_106967) TTS (NR_106967) 590 NR_106967 102466225 NR_106967 ENSG00000278596 MIR6077 MIR6077-1|MIR6077-2|hsa-mir-6077|hsa-mir-6077-1|hsa-mir-6077-2 microRNA 6077 ncRNA chr22-521 chr22 40462670 40462880 + 22.9 0.000 intron (NM_020831, intron 4 of 14) intron (NM_020831, intron 4 of 14) 665 NM_001282660 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr20-148 chr20 38173409 38173619 + 22.9 0.000 Intergenic Intergenic -7006 NM_001323316 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr19-939 chr19 37655234 37655444 + 22.9 0.000 5' UTR (NM_014898, exon 1 of 6) 5' UTR (NM_014898, exon 1 of 6) 126 NM_001320670 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding chr6-587 chr6 154675648 154675858 + 22.9 0.000 Intergenic Intergenic -57625 NM_001286189 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr11-692 chr11 108870454 108870664 + 22.9 0.000 intron (NM_004398, intron 16 of 17) L2a|LINE|L2 205490 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr7-713 chr7 102991716 102991926 + 22.9 0.000 intron (NR_105043, intron 7 of 20) intron (NR_105043, intron 7 of 20) 18391 NM_001085386 58160 Hs.621233 NM_001085386 ENSG00000230257 NFE4 NF-E4 nuclear factor, erythroid 4 protein-coding chr8-299 chr8 22441055 22441265 + 22.9 0.000 5' UTR (NM_001243975, exon 1 of 13) 5' UTR (NM_001243975, exon 1 of 13) 190 NM_001243975 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr18-253 chr18 23231399 23231609 + 22.9 0.000 intron (NR_023359, intron 4 of 6) intron (NR_023359, intron 4 of 6) 75679 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr7-664 chr7 155666092 155666302 + 22.9 0.000 intron (NM_053043, intron 2 of 17) MLT2B1|LTR|ERVL 21536 NM_053043 155435 Hs.591815 NM_053043 ENSG00000184863 RBM33 PRR8 RNA binding motif protein 33 protein-coding chr1-2256 chr1 201542749 201542959 + 22.9 0.000 Intergenic Intergenic 22950 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr16-287 chr16 86555162 86555372 + 22.9 0.000 promoter-TSS (NM_001159377) promoter-TSS (NM_001159377) -32 NR_027490 64779 Hs.343627 NM_022764 ENSG00000103248 MTHFSD - methenyltetrahydrofolate synthetase domain containing protein-coding chr12-852 chr12 132615058 132615268 + 22.9 0.000 Intergenic Intergenic -3613 NM_170683 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr15-325 chr15 89750756 89750966 + 22.9 0.000 exon (NM_018670, exon 1 of 2) exon (NM_018670, exon 1 of 2) 448 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr2-851 chr2 26299911 26300121 + 22.9 0.000 Intergenic HERV15-int|LTR|ERV1 19033 NM_001145168 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr5-936 chr5 35781401 35781611 + 22.9 0.000 intron (NM_024867, intron 30 of 36) intron (NM_024867, intron 30 of 36) -75385 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr6-420 chr6 158803798 158804008 + 22.9 0.000 intron (NM_003379, intron 1 of 12) intron (NM_003379, intron 1 of 12) -14076 NR_102425 101409257 Hs.571207 NR_102425 ENSG00000233893 EZR-AS1 - EZR antisense RNA 1 ncRNA chr2-1010 chr2 235666447 235666657 + 22.7 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -148631 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr1-1311 chr1 90974309 90974519 + 22.7 0.000 intron (NM_201269, intron 2 of 5) L2a|LINE|L2 47094 NM_016620 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding chr13-159 chr13 38349568 38349778 + 22.7 0.000 promoter-TSS (NM_001286704) promoter-TSS (NM_001286704) -178 NR_104585 51569 Hs.643655 NM_016617 ENSG00000120686 UFM1 BM-002|C13orf20|HLD14 ubiquitin fold modifier 1 protein-coding chr8-589 chr8 142663247 142663457 + 22.7 0.000 3' UTR (NM_003724, exon 2 of 2) 3' UTR (NM_003724, exon 2 of 2) 6615 NM_001077527 8629 Hs.535903 NM_003724 ENSG00000234616 JRK JH8|jerky Jrk helix-turn-helix protein protein-coding chr14-278 chr14 103372672 103372882 + 22.7 0.000 Intergenic Intergenic -12587 NM_001128921 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr22-286 chr22 37686350 37686560 + 22.7 0.000 exon (NM_024313, exon 1 of 6) exon (NM_024313, exon 1 of 6) 112 NM_024313 79159 Hs.632778 NM_024313 ENSG00000273899 NOL12 Nop25|dJ37E16.7 nucleolar protein 12 protein-coding chr16-787 chr16 66007861 66008071 + 22.7 0.000 Intergenic Intergenic -358725 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr7-479 chr7 6590289 6590499 + 22.7 0.000 exon (NM_001303039, exon 1 of 7) exon (NM_001303039, exon 1 of 7) 373 NM_001303039 79034 Hs.487511 NM_024067 ENSG00000146576 C7orf26 - chromosome 7 open reading frame 26 protein-coding chr1-2497 chr1 165898992 165899202 + 22.7 0.000 intron (NM_012474, intron 4 of 6) intron (NM_012474, intron 4 of 6) -8824 NR_037431 100500832 NR_037431 ENSG00000283936 MIR3658 - microRNA 3658 ncRNA chr7-1306 chr7 82036585 82036795 + 22.7 0.000 intron (NM_000722, intron 11 of 38) L2b|LINE|L2 27513 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr22-296 chr22 41966808 41967018 + 22.7 0.000 Intergenic MIR1_Amn|SINE|MIR -2525 NM_001363845 55964 Hs.120483 NM_019106 ENSG00000100167 SEPTIN3 SEP3|SEPT3|bK250D10.3 septin 3 protein-coding chr2-1323 chr2 64312375 64312585 + 22.7 0.000 Intergenic Intergenic -28279 NR_039632 100616265 NR_039632 ENSG00000283222 MIR4433A MIR4433|hsa-mir-4433a microRNA 4433a ncRNA chr10-507 chr10 126247405 126247615 + 22.7 0.000 intron (NM_001288974, intron 3 of 18) intron (NM_001288974, intron 3 of 18) 140967 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr5-496 chr5 150299115 150299325 + 22.7 0.000 intron (NM_001012301, intron 1 of 1) L2c|LINE|L2 3685 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr17-1008 chr17 1908833 1909043 + 22.7 0.000 Intergenic Intergenic 78933 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr16-717 chr16 29901088 29901298 + 22.7 0.000 exon (NM_181718, exon 1 of 3) exon (NM_181718, exon 1 of 3) 705 NM_181718 253982 Hs.655761 NM_181718 ENSG00000174939 ASPHD1 - aspartate beta-hydroxylase domain containing 1 protein-coding chr9-265 chr9 128340673 128340883 + 22.7 0.000 5' UTR (NM_005094, exon 1 of 13) 5' UTR (NM_005094, exon 1 of 13) 251 NM_005094 10999 Hs.656699 NM_005094 ENSG00000167114 SLC27A4 ACSVL4|FATP4|IPS solute carrier family 27 member 4 protein-coding chr9-700 chr9 33076667 33076877 + 22.7 0.000 promoter-TSS (NM_018225) promoter-TSS (NM_018225) -98 NM_018225 55234 Hs.655351 NM_018225 ENSG00000122692 SMU1 BWD|SMU-1|fSAP57 SMU1 DNA replication regulator and spliceosomal factor protein-coding chr11-898 chr11 33557387 33557597 + 22.7 0.000 intron (NM_012194, intron 6 of 20) intron (NM_012194, intron 6 of 20) 143248 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr14-788 chr14 68774742 68774952 + 22.7 0.000 Intergenic Intergenic 19067 NM_004926 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr3-841 chr3 15964744 15964954 + 22.7 0.000 Intergenic Intergenic 91078 NR_030289 693148 NR_030289 ENSG00000207815 MIR563 MIRN563|hsa-mir-563 microRNA 563 ncRNA chr13-273 chr13 75399689 75399899 + 22.7 0.000 intron (NM_001286658, intron 1 of 19) MLT1H1|LTR|ERVL-MaLR 82374 NM_001286658 9882 Hs.210891 NM_014832 ENSG00000136111 TBC1D4 AS160|NIDDM5 TBC1 domain family member 4 protein-coding chr18-133 chr18 79912652 79912862 + 22.7 0.000 intron (NM_001146343, intron 3 of 3) intron (NM_001146343, intron 3 of 3) 38896 NM_025078 80148 Hs.288284 NM_025078 ENSG00000122490 SLC66A2 PQLC1 solute carrier family 66 member 2 protein-coding chr1-1351 chr1 21939733 21939943 + 22.7 0.000 Intergenic Intergenic -2528 NM_005529 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr12-1009 chr12 6323668 6323878 + 22.7 0.000 intron (NM_001144857, intron 12 of 14) L2b|LINE|L2 11122 NM_001144857 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr18-82 chr18 9102411 9102621 + 22.7 0.000 promoter-TSS (NM_021074) promoter-TSS (NM_021074) -183 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr8-471 chr8 30284571 30284781 + 22.7 0.000 Intergenic Intergenic -99825 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr15-170 chr15 77420242 77420452 + 22.7 0.000 promoter-TSS (NM_018200) promoter-TSS (NM_018200) -243 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding chr8-756 chr8 98835089 98835299 + 22.7 0.000 intron (NM_001256312, intron 3 of 12) LTR23|LTR|ERV1 -9506 NM_006281 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr21-87 chr21 36069856 36070066 + 22.7 0.000 promoter-TSS (NM_001286789) promoter-TSS (NM_001286789) -63 NM_001286789 873 Hs.88778 NM_001757 ENSG00000159228 CBR1 CBR|SDR21C1|hCBR1 carbonyl reductase 1 protein-coding chr22-397 chr22 28911969 28912179 + 22.7 0.000 intron (NM_001206998, intron 1 of 8) intron (NM_001206998, intron 1 of 8) -5315 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr19-427 chr19 3094077 3094287 + 22.7 0.000 promoter-TSS (NM_002067) promoter-TSS (NM_002067) -180 NM_002067 2767 Hs.650575 NM_002067 ENSG00000088256 GNA11 FBH|FBH2|FHH2|GNA-11|HHC2|HYPOC2 G protein subunit alpha 11 protein-coding chr3-1167 chr3 136955851 136956061 + 22.7 0.000 Intergenic Intergenic -2027 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr5-305 chr5 171667801 171668011 + 22.7 0.000 Intergenic Intergenic -117966 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr1-999 chr1 27525726 27525936 + 22.7 0.000 Intergenic Intergenic -35664 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr15-166 chr15 40941741 40941951 + 22.7 0.000 Intergenic CpG -11625 NM_001142776 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr18-318 chr18 77108414 77108624 + 22.7 0.000 intron (NM_001025100, intron 1 of 3) intron (NM_001025100, intron 1 of 3) 24264 NM_001025100 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr6-178 chr6 157021508 157021718 + 22.7 0.000 intron (NM_020732, intron 5 of 19) CpG -14814 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr6-576 chr6 89080507 89080717 + 22.7 0.000 promoter-TSS (NM_006813) promoter-TSS (NM_006813) -139 NM_006813 10957 Hs.75969 NM_006813 ENSG00000146278 PNRC1 B4-2|PNAS-145|PROL2|PRR2 proline rich nuclear receptor coactivator 1 protein-coding chr7-518 chr7 1611893 1612103 + 22.7 0.000 Intergenic Intergenic -2472 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr12-640 chr12 124030566 124030776 + 22.7 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 57456 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr1-1236 chr1 77671866 77672076 + 22.7 0.000 intron (NM_001308237, intron 1 of 13) MER44B|DNA|TcMar-Tigger 10687 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr4-494 chr4 7890581 7890791 + 22.7 0.000 intron (NM_198595, intron 1 of 16) L1ME1|LINE|L1 -18378 NM_001371090 chr17-695 chr17 75261633 75261843 + 22.7 0.000 promoter-TSS (NM_014001) promoter-TSS (NM_014001) -132 NM_138619 23163 Hs.87726 NM_014001 ENSG00000125447 GGA3 - golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding chr16-553 chr16 30183361 30183571 + 22.7 0.000 promoter-TSS (NM_001193333) promoter-TSS (NM_001193333) 56 NM_007074 11151 Hs.415067 NM_007074 ENSG00000102879 CORO1A CLABP|CLIPINA|HCORO1|IMD8|TACO|p57 coronin 1A protein-coding chr4-823 chr4 142567839 142568049 + 22.7 0.000 intron (NM_003866, intron 2 of 26) intron (NM_003866, intron 2 of 26) 278591 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr3-1272 chr3 194682613 194682823 + 22.7 0.000 Intergenic Intergenic -3165 NM_153690 131583 Hs.435080 NM_153690 ENSG00000185112 FAM43A - family with sequence similarity 43 member A protein-coding chr6-264 chr6 158559905 158560115 + 22.7 0.000 intron (NM_020823, intron 1 of 16) CpG 23574 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr7-1259 chr7 47916456 47916666 + 22.7 0.000 intron (NM_138295, intron 7 of 56) L1PB1|LINE|L1 31930 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr5-718 chr5 109330024 109330234 + 22.7 0.000 Intergenic Intergenic -3760 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr5-162 chr5 80654827 80655037 + 22.7 0.000 promoter-TSS (NR_110936) promoter-TSS (NR_110936) 51 NM_001290354 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr2-713 chr2 113603682 113603892 + 22.7 0.000 promoter-TSS (NR_024004) promoter-TSS (NR_024004) -70 NR_024004 84771 Hs.712940 NR_024004 DDX11L2 - DEAD/H-box helicase 11 like 2 pseudo chr7-1454 chr7 81367540 81367750 + 22.7 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 194174 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chr16-683 chr16 12340227 12340437 + 22.7 0.000 intron (NM_032167, intron 15 of 20) intron (NM_032167, intron 15 of 20) 363598 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr11-1007 chr11 14288438 14288648 + 22.7 0.000 intron (NM_001177314, intron 4 of 5) intron (NM_001177314, intron 4 of 5) 69942 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr1-697 chr1 147670446 147670656 + 22.7 0.000 promoter-TSS (NR_136636) promoter-TSS (NR_136636) -27 NR_136633 51205 Hs.562154 NM_016361 ENSG00000162836 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding chr2-1906 chr2 158507802 158508012 + 22.7 0.000 intron (NM_001005476, intron 1 of 20) intron (NM_001005476, intron 1 of 20) 50955 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr3-247 chr3 58014178 58014388 + 22.7 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 5861 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr11-1184 chr11 71372779 71372989 + 22.7 0.000 Intergenic Intergenic 50470 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr7-795 chr7 55369592 55369802 + 22.7 0.000 intron (NM_018697, intron 1 of 8) intron (NM_018697, intron 1 of 8) 4249 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr9-399 chr9 120842914 120843124 + 22.7 0.000 promoter-TSS (NM_005047) promoter-TSS (NM_005047) -56 NR_024408 253039 Hs.594170 NR_024408 ENSG00000226752 CUTALP PSMD5-AS1 cutA divalent cation tolerance homolog-like, pseudogene pseudo chr4-577 chr4 10336610 10336820 + 22.7 0.000 Intergenic MLT2B5|LTR|ERVL 120711 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr17-880 chr17 17959770 17959980 + 22.7 0.000 intron (NM_001288787, intron 1 of 13) intron (NM_001288787, intron 1 of 13) 12525 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr8-260 chr8 106765367 106765577 + 22.7 0.000 intron (NM_139166, intron 1 of 1) intron (NM_139166, intron 1 of 1) 4772 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr2-533 chr2 197515747 197515957 + 22.7 0.000 promoter-TSS (NM_001204094) promoter-TSS (NM_001204094) -214 NM_001100819 25843 Hs.633165 NM_015387 ENSG00000115540 MOB4 2C4D|CGI-95|MOB1|MOB3|MOBKL3|PHOCN|PREI3 MOB family member 4, phocein protein-coding chr2-874 chr2 239280416 239280626 + 22.7 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -24941 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr22-558 chr22 29621763 29621973 + 22.7 0.000 intron (NM_181831, intron 1 of 14) L2c|LINE|L2 18235 NM_181831 4771 Hs.187898 NM_000268 ENSG00000186575 NF2 ACN|BANF|SCH neurofibromin 2 protein-coding chr12-629 chr12 50066517 50066727 + 22.7 0.000 intron (NM_020039, intron 3 of 11) L2a|LINE|L2 -6963 NM_001256830 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr19-1164 chr19 3369463 3369673 + 22.7 0.000 intron (NM_001245002, intron 1 of 10) CpG 2985 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr12-530 chr12 120247481 120247691 + 22.7 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 2577 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr2-1688 chr2 128408975 128409185 + 22.7 0.000 Intergenic Intergenic -90212 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr18-180 chr18 21242297 21242507 + 22.7 0.000 intron (NM_001142966, intron 1 of 32) CpG 160 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr20-169 chr20 3777804 3778014 + 22.7 0.000 3' UTR (NM_015417, exon 7 of 7) 3' UTR (NM_015417, exon 7 of 7) 3539 NM_015417 25876 Hs.72620 NM_015417 ENSG00000101222 SPEF1 C20orf28|CLAMP|SPEF1A sperm flagellar 1 protein-coding chr1-1901 chr1 197321152 197321362 + 22.7 0.000 intron (NM_001257965, intron 3 of 14) intron (NM_001257965, intron 3 of 14) 53005 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr4-447 chr4 84966666 84966876 + 22.7 0.000 promoter-TSS (NR_015359) promoter-TSS (NR_015359) 39 NR_152779 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr1-2000 chr1 28755709 28755919 + 22.7 0.000 intron (NM_001173128, intron 5 of 5) Tigger4a|DNA|TcMar-Tigger 18874 NM_001172828 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr1-659 chr1 9428950 9429160 + 22.7 0.000 promoter-TSS (NR_104623) promoter-TSS (NR_104623) -59 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr3-1110 chr3 69306409 69306619 + 22.7 0.000 intron (NM_015123, intron 3 of 22) intron (NM_015123, intron 3 of 22) 79574 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr15-133 chr15 101251994 101252204 + 22.7 0.000 promoter-TSS (NM_014918) promoter-TSS (NM_014918) -51 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr22-271 chr22 37560087 37560297 + 22.7 0.000 promoter-TSS (NM_152243) promoter-TSS (NM_152243) -288 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr7-1365 chr7 100407609 100407819 + 22.7 0.000 intron (NM_001258008, intron 10 of 15) intron (NM_001258008, intron 10 of 15) 20989 NM_001258008 55063 Hs.105191 NM_017984 ENSG00000078487 ZCWPW1 ZCW1 zinc finger CW-type and PWWP domain containing 1 protein-coding chr2-1804 chr2 44075647 44075857 + 22.7 0.000 Intergenic Intergenic -79763 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr3-1269 chr3 188950883 188951093 + 22.7 0.000 Intergenic Intergenic -3349 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr19-642 chr19 55494313 55494523 + 22.7 0.000 intron (NM_001144950, intron 7 of 13) intron (NM_001144950, intron 7 of 13) 5982 NM_001144950 284297 Hs.554182 NM_182571 ENSG00000179954 SSC5D S5D-SRCRB scavenger receptor cysteine rich family member with 5 domains protein-coding chr3-723 chr3 33360565 33360775 + 22.7 0.000 intron (NM_012157, intron 4 of 14) intron (NM_012157, intron 4 of 14) 79708 NM_001128160 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr22-223 chr22 39502219 39502429 + 22.7 0.000 promoter-TSS (NM_019008) promoter-TSS (NM_019008) 94 NM_019008 54471 Hs.728085 NM_013298 ENSG00000100335 MIEF1 AltMIEF1|HSU79252|MID51|MIEF1-MP|SMCR7L|dJ1104E15.3 mitochondrial elongation factor 1 protein-coding chr5-935 chr5 34958123 34958333 + 22.7 0.000 3' UTR (NM_001348420, exon 12 of 12) 3' UTR (NM_001348420, exon 12 of 12) 28635 NM_194283 134218 Hs.131887 NM_194283 ENSG00000168724 DNAJC21 BMFS3|DNAJA5|GS3|JJJ1 DnaJ heat shock protein family (Hsp40) member C21 protein-coding chr19-987 chr19 17507968 17508178 + 22.7 0.000 intron (NR_147835, intron 1 of 2) MER44B|DNA|TcMar-Tigger -3576 NM_012088 25796 Hs.466165 NM_012088 ENSG00000130313 PGLS 6PGL|HEL-S-304 6-phosphogluconolactonase protein-coding chr4-511 chr4 107283723 107283933 + 22.7 0.000 Intergenic Intergenic -247515 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr3-931 chr3 69090176 69090386 + 22.7 0.000 intron (NM_006407, intron 1 of 2) intron (NM_006407, intron 1 of 2) 5344 NM_006407 10550 Hs.518060 NM_006407 ENSG00000144746 ARL6IP5 DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx ADP ribosylation factor like GTPase 6 interacting protein 5 protein-coding chr1-1715 chr1 25182671 25182881 + 22.7 0.000 Intergenic Intergenic 49726 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr11-925 chr11 11998494 11998704 + 22.7 0.000 intron (NM_015881, intron 4 of 7) intron (NM_015881, intron 4 of 7) 10040 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr4-528 chr4 85113743 85113953 + 22.7 0.000 Intergenic Intergenic 146364 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr4-594 chr4 111556304 111556514 + 22.7 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu -589045 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr13-249 chr13 45332497 45332707 + 22.7 0.000 TTS (NM_001286272) TTS (NM_001286272) 3845 NR_145985 109616966 NR_145726 ENSG00000253051 SNORA31B - small nucleolar RNA, H/ACA box 31B snoRNA chr1-721 chr1 167721764 167721974 + 22.7 0.000 promoter-TSS (NM_003953) promoter-TSS (NM_003953) -113 NM_003953 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr10-752 chr10 69786878 69787088 + 22.7 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -14923 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr16-470 chr16 89837788 89837998 + 22.7 0.000 intron (NM_032451, intron 1 of 14) intron (NM_032451, intron 1 of 14) 9418 NM_032451 84501 Hs.461786 NM_032451 ENSG00000204991 SPIRE2 Spir-2 spire type actin nucleation factor 2 protein-coding chr3-377 chr3 127173085 127173295 + 22.7 0.000 Intergenic Intergenic -19941 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr16-731 chr16 86994722 86994932 + 22.7 0.000 Intergenic Intergenic -62957 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr8-810 chr8 132735055 132735265 + 22.7 0.000 intron (NM_144649, intron 5 of 9) intron (NM_144649, intron 5 of 9) 25422 NM_144649 137835 Hs.293842 NM_144649 ENSG00000165071 TMEM71 - transmembrane protein 71 protein-coding chr7-965 chr7 1526647 1526857 + 22.7 0.000 Intergenic L1MC5a|LINE|L1 -3950 NM_002360 7975 Hs.520612 NM_002360 ENSG00000198517 MAFK NFE2U|P18 MAF bZIP transcription factor K protein-coding chr3-550 chr3 101827783 101827993 + 22.7 0.000 promoter-TSS (NM_001005474) promoter-TSS (NM_001005474) -102 NM_001005474 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr1-1193 chr1 47179170 47179380 + 22.7 0.000 promoter-TSS (NR_047498) promoter-TSS (NR_047498) 25 NR_047498 100874253 Hs.435758 NR_047498 ENSG00000224805 LINC00853 PDZK1IP1-AS1|ncRNA-a4 long intergenic non-protein coding RNA 853 ncRNA chr12-326 chr12 124549068 124549278 + 22.7 0.000 intron (NM_001077261, intron 1 of 47) MIRb|SINE|MIR 18439 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr20-613 chr20 10511643 10511853 + 22.7 0.000 intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 76443 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr12-990 chr12 110107875 110108085 + 22.7 0.000 Intergenic LTR16B1|LTR|ERVL -16377 NM_001143779 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr4-191 chr4 26320758 26320968 + 22.7 0.000 promoter-TSS (NM_015874) promoter-TSS (NM_015874) 56 NM_203284 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr3-679 chr3 127748118 127748328 + 22.7 0.000 intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 74659 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr2-892 chr2 85504948 85505158 + 22.6 0.000 Intergenic MIR3|SINE|MIR 33833 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr1-935 chr1 211382677 211382887 + 22.6 0.000 promoter-TSS (NR_026761) promoter-TSS (NR_026761) 27 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA chr1-1491 chr1 208885166 208885376 + 22.6 0.000 Intergenic Intergenic -87183 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr6-507 chr6 160088519 160088729 + 22.6 0.000 intron (NM_000876, intron 42 of 47) intron (NM_000876, intron 42 of 47) -4458 NR_003288 729603 Hs.674810 NR_003288 ENSG00000213073 LOC729603 - calcineurin like EF-hand protein 1 pseudogene pseudo chr2-901 chr2 127225216 127225426 + 22.6 0.000 Intergenic Intergenic -5022 NM_001367501 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr1-1087 chr1 39047873 39048083 + 22.6 0.000 Intergenic MER102c|DNA|hAT-Charlie 21628 NM_004552 4725 Hs.632385 NM_004552 ENSG00000168653 NDUFS5 CI-15k|CI15K NADH:ubiquinone oxidoreductase subunit S5 protein-coding chr5-1315 chr5 80516895 80517105 + 22.6 0.000 intron (NM_205548, intron 3 of 5) MER44B|DNA|TcMar-Tigger 28900 NM_205548 167555 Hs.338182 NM_205548 ENSG00000152380 FAM151B UNQ9217 family with sequence similarity 151 member B protein-coding chr5-345 chr5 75053601 75053811 + 22.6 0.000 Intergenic CpG-22198 -1148 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding chr15-238 chr15 99100630 99100840 + 22.6 0.000 Intergenic CpG -4345 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr22-341 chr22 36462154 36462364 + 22.6 0.000 Intergenic Intergenic 19381 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr22-632 chr22 43185868 43186078 + 22.6 0.000 intron (NM_015140, intron 1 of 13) intron (NM_015140, intron 1 of 13) 1161 NM_015140 23170 Hs.517670 NM_015140 ENSG00000100304 TTLL12 dJ526I14.2 tubulin tyrosine ligase like 12 protein-coding chr5-503 chr5 13632743 13632953 + 22.6 0.000 Intergenic LTR33A|LTR|ERVL 311632 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr13-68 chr13 21061530 21061740 + 22.6 0.000 promoter-TSS (NM_014572) promoter-TSS (NM_014572) -49 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr10-668 chr10 72812674 72812884 + 22.6 0.000 intron (NR_073062, intron 3 of 9) intron (NR_073062, intron 3 of 9) -80960 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr15-364 chr15 33104408 33104618 + 22.6 0.000 intron (NM_001277313, intron 4 of 20) intron (NM_001277313, intron 4 of 20) -36339 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr1-2275 chr1 234811921 234812131 + 22.6 0.000 Intergenic Intergenic -51970 NR_148962 100130249 Hs.617350 NR_148962 ENSG00000279261 PP2672 - uncharacterized LOC100130249 ncRNA chr5-784 chr5 180800228 180800438 + 22.6 0.000 intron (NR_157150, intron 1 of 1) MLT1G3|LTR|ERVL-MaLR 2473 NM_001364392 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr9-422 chr9 127534456 127534666 + 22.6 0.000 intron (NM_001035534, intron 1 of 13) intron (NM_001035534, intron 1 of 13) 34512 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr19-812 chr19 43754726 43754936 + 22.6 0.000 5' UTR (NM_019108, exon 1 of 14) 5' UTR (NM_019108, exon 1 of 14) 131 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr20-327 chr20 35619215 35619425 + 22.6 0.000 intron (NM_001317931, intron 9 of 11) CpG-17676 3436 NM_001317931 6676 Hs.123159 NM_003116 ENSG00000061656 SPAG4 CT127|SUN4 sperm associated antigen 4 protein-coding chr16-537 chr16 58264940 58265150 + 22.6 0.000 intron (NM_014157, intron 6 of 8) intron (NM_014157, intron 6 of 8) 15109 NM_001142302 29070 Hs.11614 NM_014157 ENSG00000103021 CCDC113 HSPC065 coiled-coil domain containing 113 protein-coding chr8-601 chr8 124426226 124426436 + 22.6 0.000 Intergenic Intergenic -24489 NM_017956 55039 Hs.9925 NM_017956 ENSG00000183665 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog protein-coding chr21-176 chr21 45954217 45954427 + 22.6 0.000 Intergenic PABL_A|LTR|ERV1 -18648 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr7-754 chr7 127751197 127751407 + 22.6 0.000 intron (NM_014390, intron 10 of 23) intron (NM_014390, intron 10 of 23) 99108 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr8-345 chr8 18886774 18886984 + 22.6 0.000 5' UTR (NM_001362819, exon 1 of 15) 5' UTR (NM_001362819, exon 1 of 15) 178 NM_001362819 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr10-758 chr10 92544429 92544639 + 22.6 0.000 intron (NR_136399, intron 1 of 25) intron (NR_136399, intron 1 of 25) 28972 NM_001322796 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr6-237 chr6 57172312 57172522 + 22.6 0.000 promoter-TSS (NR_110742) promoter-TSS (NR_110742) 91 NM_004282 9532 Hs.745046 NM_004282 ENSG00000112208 BAG2 BAG-2|dJ417I1.2 BCL2 associated athanogene 2 protein-coding chr16-460 chr16 20806596 20806806 + 22.6 0.000 promoter-TSS (NM_001142725) promoter-TSS (NM_001142725) 174 NM_030941 81691 Hs.177926 NM_030941 ENSG00000005189 REXO5 NEF-sp RNA exonuclease 5 protein-coding chr10-700 chr10 74432970 74433180 + 22.6 0.000 intron (NM_001369124, intron 6 of 9) intron (NM_001369124, intron 6 of 9) 96249 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr2-867 chr2 207121929 207122139 + 22.6 0.000 intron (NR_073108, intron 3 of 4) intron (NR_073108, intron 3 of 4) -11961 NR_036227 100423036 NR_036227 ENSG00000253008 MIR2355 mir-2355 microRNA 2355 ncRNA chr11-814 chr11 45021999 45022209 + 22.6 0.000 Intergenic MIRb|SINE|MIR 48202 NR_026681 221122 Hs.551656 NR_026681 ENSG00000254654 LINC02685 - long intergenic non-protein coding RNA 2685 ncRNA chr3-1023 chr3 128878740 128878950 + 22.6 0.000 promoter-TSS (NR_033426) promoter-TSS (NR_033426) -645 NR_033426 28976 Hs.567482 NM_014049 ENSG00000177646 ACAD9 MC1DN20|NPD002 acyl-CoA dehydrogenase family member 9 protein-coding chr15-851 chr15 70795493 70795703 + 22.6 0.000 Intergenic Intergenic -32040 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr18-223 chr18 45935720 45935930 + 22.6 0.000 intron (NM_020964, intron 10 of 43) intron (NM_020964, intron 10 of 43) 31504 NM_020964 57724 Hs.514843 NM_020964 ENSG00000152223 EPG5 HEEW1|KIAA1632|VICIS ectopic P-granules autophagy protein 5 homolog protein-coding chr13-531 chr13 32225534 32225744 + 22.6 0.000 intron (NM_023037, intron 38 of 60) intron (NM_023037, intron 38 of 60) 86315 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr15-112 chr15 90994622 90994832 + 22.6 0.000 promoter-TSS (NM_003981) promoter-TSS (NM_003981) -192 NM_199413 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding chr4-754 chr4 187469607 187469817 + 22.6 0.000 intron (NR_038931, intron 1 of 4) intron (NR_038931, intron 1 of 4) 35901 NR_038931 339975 Hs.639361 NR_038931 LOC339975 - uncharacterized LOC339975 ncRNA chr6-721 chr6 116254024 116254234 + 22.6 0.000 promoter-TSS (NM_021648) promoter-TSS (NM_021648) -42 NR_136520 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr6-207 chr6 166956400 166956610 + 22.6 0.000 promoter-TSS (NM_003730) promoter-TSS (NM_003730) 45 NM_003730 8635 Hs.529989 NM_003730 ENSG00000026297 RNASET2 RNASE6PL|bA514O12.3 ribonuclease T2 protein-coding chr4-497 chr4 20520954 20521164 + 22.6 0.000 intron (NM_001289135, intron 12 of 35) intron (NM_001289135, intron 12 of 35) -7216 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr6-562 chr6 145015926 145016136 + 22.6 0.000 Intergenic Intergenic 610376 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr7-447 chr7 23105728 23105938 + 22.6 0.000 promoter-TSS (NR_033328) promoter-TSS (NR_033328) 48 NR_033328 55975 Hs.654817 NM_018846 ENSG00000122550 KLHL7 CISS3|KLHL6|SBBI26 kelch like family member 7 protein-coding chr18-218 chr18 12679200 12679410 + 22.6 0.000 intron (NM_001271989, intron 8 of 10) MER61A|LTR|ERV1 20566 NM_147163 56984 Hs.464652 NM_020232 ENSG00000128789 PSMG2 CLAST3|HCCA3|HsT1707|MDS003|PAC2|TNFSF5IP1 proteasome assembly chaperone 2 protein-coding chr9-754 chr9 84297277 84297487 + 22.6 0.000 intron (NM_022127, intron 8 of 18) intron (NM_022127, intron 8 of 18) 43376 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr1-1033 chr1 9589434 9589644 + 22.6 0.000 intron (NM_001010866, intron 1 of 5) intron (NM_001010866, intron 1 of 5) 628 NM_001130924 199953 Hs.632365 NM_001010866 ENSG00000188807 TMEM201 Ima1|NET5|SAMP1 transmembrane protein 201 protein-coding chr17-1197 chr17 75109810 75110020 + 22.6 0.000 promoter-TSS (NM_001304272) promoter-TSS (NM_001304272) -54 NM_001304273 79637 Hs.413047 NM_024585 ENSG00000125449 ARMC7 - armadillo repeat containing 7 protein-coding chr3-457 chr3 40524641 40524851 + 22.6 0.000 promoter-TSS (NM_198484) promoter-TSS (NM_198484) -132 NM_001287245 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr14-287 chr14 55108001 55108211 + 22.6 0.000 Intergenic Intergenic -21146 NM_002306 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr1-998 chr1 27031670 27031880 + 22.6 0.000 Intergenic Intergenic -18925 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr5-636 chr5 903147 903357 + 22.6 0.000 intron (NM_001166260, intron 5 of 8) LTR13|LTR|ERVK 10368 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr21-142 chr21 33199897 33200107 + 22.6 0.000 Intergenic Intergenic -29766 NR_024102 728409 Hs.125234 NR_024102 ENSG00000229086 LINC01548 C21orf54 long intergenic non-protein coding RNA 1548 ncRNA chr9-744 chr9 385863 386073 + 22.6 0.000 intron (NM_001190458, intron 21 of 45) intron (NM_001190458, intron 21 of 45) -84323 NM_001256876 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr14-266 chr14 87993019 87993229 + 22.6 0.000 promoter-TSS (NM_000153) promoter-TSS (NM_000153) 58 NM_000153 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr2-801 chr2 9310478 9310688 + 22.6 0.000 intron (NM_003887, intron 3 of 27) intron (NM_003887, intron 3 of 27) 103771 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr7-672 chr7 14902684 14902894 + 22.6 0.000 promoter-TSS (NM_001350716) promoter-TSS (NM_001350716) -38 NM_001350709 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr4-634 chr4 32789065 32789275 + 22.6 0.000 Intergenic LTR16C|LTR|ERVL 438132 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr14-671 chr14 69034853 69035063 + 22.6 0.000 Intergenic Intergenic 55276 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr6-421 chr6 166619082 166619292 + 22.6 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 8064 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr1-1085 chr1 29709155 29709365 + 22.6 0.000 Intergenic Intergenic 328352 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr15-117 chr15 73930565 73930775 + 22.6 0.000 intron (NM_005576, intron 1 of 6) intron (NM_005576, intron 1 of 6) -2422 NR_040068 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr22-347 chr22 50304796 50305006 + 22.6 0.000 intron (NM_012401, intron 1 of 36) intron (NM_012401, intron 1 of 36) 2745 NM_012401 23654 Hs.3989 NM_012401 ENSG00000196576 PLXNB2 MM1|Nbla00445|PLEXB2|dJ402G11.3 plexin B2 protein-coding chr1-1315 chr1 119140583 119140793 + 22.6 0.000 promoter-TSS (NM_201263) promoter-TSS (NM_201263) -16 NM_015836 10352 Hs.523506 NM_015836 ENSG00000116874 WARS2 NEMMLAS|TrpRS|mtTrpRS tryptophanyl tRNA synthetase 2, mitochondrial protein-coding chr12-327 chr12 1612259 1612469 + 22.6 0.000 Intergenic Intergenic -4692 NM_030775 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr6-986 chr6 155117295 155117505 + 22.6 0.000 intron (NM_012454, intron 1 of 25) intron (NM_012454, intron 1 of 25) 27111 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr12-625 chr12 45369208 45369418 + 22.6 0.000 intron (NM_001025356, intron 9 of 19) intron (NM_001025356, intron 9 of 19) 76623 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr21-313 chr21 9736882 9737092 + 22.6 0.000 Intergenic Intergenic 74798 NR_135513 105379514 Hs.543309 NR_135513 LOC105379514 - uncharacterized LOC105379514 ncRNA chr6-440 chr6 159171107 159171317 + 22.6 0.000 intron (NM_032532, intron 1 of 22) intron (NM_032532, intron 1 of 22) -1205 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA chr7-404 chr7 2477697 2477907 + 22.6 0.000 Intergenic Intergenic -1419 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr5-481 chr5 180293508 180293718 + 22.6 0.000 Intergenic Intergenic -1530 NM_001135044 5601 Hs.484371 NM_002752 ENSG00000050748 MAPK9 JNK-55|JNK2|JNK2A|JNK2ALPHA|JNK2B|JNK2BETA|PRKM9|SAPK|SAPK1a|p54a|p54aSAPK mitogen-activated protein kinase 9 protein-coding chr4-877 chr4 165312603 165312813 + 22.6 0.000 intron (NM_001161522, intron 10 of 13) L1MB8|LINE|L1 -14958 NM_001017369 6307 Hs.105269 NM_006745 ENSG00000052802 MSMO1 DESP4|ERG25|MCCPD|SC4MOL methylsterol monooxygenase 1 protein-coding chr3-398 chr3 49856640 49856850 + 22.6 0.000 promoter-TSS (NM_005879) promoter-TSS (NM_005879) -181 NM_005879 10293 Hs.517972 NM_005879 ENSG00000183763 TRAIP RNF206|SCKL9|TRIP TRAF interacting protein protein-coding chr1-1465 chr1 30809620 30809830 + 22.6 0.000 Intergenic L2a|LINE|L2 -14927 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr19-1251 chr19 49149310 49149520 + 22.6 0.000 intron (NR_103842, intron 26 of 28) CpG-14897 5981 NM_002152 3270 Hs.436885 NM_002152 ENSG00000130528 HRC - histidine rich calcium binding protein protein-coding chr9-480 chr9 127521655 127521865 + 22.6 0.000 intron (NM_022833, intron 5 of 13) intron (NM_022833, intron 5 of 13) 47313 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr16-600 chr16 31202603 31202813 + 22.6 0.000 promoter-TSS (NM_145182) promoter-TSS (NM_145182) 52 NM_013258 29108 Hs.499094 NM_013258 ENSG00000103490 PYCARD ASC|CARD5|TMS|TMS-1|TMS1 PYD and CARD domain containing protein-coding chr7-318 chr7 4882284 4882494 + 22.6 0.000 intron (NM_018059, intron 1 of 14) intron (NM_018059, intron 1 of 14) 1327 NM_018059 55698 Hs.667336 NM_018059 ENSG00000157927 RADIL RASIP2 Rap associating with DIL domain protein-coding chr6-388 chr6 56525352 56525562 + 22.6 0.000 intron (NM_001144770, intron 61 of 94) intron (NM_001144770, intron 61 of 94) 117432 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr16-605 chr16 67249773 67249983 + 22.6 0.000 intron (NM_001323972, intron 1 of 14) MIRb|SINE|MIR 899 NM_004594 6553 Hs.439650 NM_004594 ENSG00000135740 SLC9A5 NHE5 solute carrier family 9 member A5 protein-coding chr20-135 chr20 35699312 35699522 + 22.6 0.000 promoter-TSS (NM_001198989) promoter-TSS (NM_001198989) 12 NM_080748 140823 Hs.472564 NM_080748 ENSG00000125995 ROMO1 C20orf52|MTGM|MTGMP|bA353C18.2 reactive oxygen species modulator 1 protein-coding chr5-614 chr5 62475110 62475320 + 22.6 0.000 intron (NM_016338, intron 8 of 29) intron (NM_016338, intron 8 of 29) 56331 NM_001134779 51194 Hs.482269 NM_016338 ENSG00000086200 IPO11 RanBP11 importin 11 protein-coding chr8-438 chr8 94018566 94018776 + 22.5 0.000 Intergenic Intergenic 101724 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr5-623 chr5 122870476 122870686 + 22.5 0.000 intron (NM_014035, intron 1 of 6) intron (NM_014035, intron 1 of 6) 24968 NM_014035 28966 Hs.483200 NM_014035 ENSG00000064652 SNX24 PRO1284|SBBI31 sorting nexin 24 protein-coding chr9-371 chr9 133910964 133911174 + 22.5 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 81255 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr6-652 chr6 34902009 34902219 + 22.5 0.000 intron (NM_015245, intron 1 of 23) intron (NM_015245, intron 1 of 23) 12859 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr14-533 chr14 103074357 103074567 + 22.5 0.000 Intergenic MIR|SINE|MIR -9748 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chr16-794 chr16 75304636 75304846 + 22.5 0.000 intron (NM_006324, intron 6 of 6) intron (NM_006324, intron 6 of 6) -36734 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr16-664 chr16 27475764 27475974 + 22.5 0.000 intron (NM_001520, intron 29 of 36) intron (NM_001520, intron 29 of 36) -22476 NR_037158 283888 Hs.660935 NR_037158 ENSG00000259954 IL21R-AS1 - IL21R antisense RNA 1 ncRNA chr22-176 chr22 30288049 30288259 + 22.5 0.000 intron (NM_001037666, intron 2 of 8) intron (NM_001037666, intron 2 of 8) 1473 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 CASTOR1 GATSL3 cytosolic arginine sensor for mTORC1 subunit 1 protein-coding chr19-684 chr19 52897608 52897818 + 22.5 0.000 promoter-TSS (NM_001351776) promoter-TSS (NM_001351776) -19 NM_001351773 162967 Hs.369632 NM_207333 ENSG00000182986 ZNF320 ZFPL zinc finger protein 320 protein-coding chr10-679 chr10 124560453 124560663 + 22.5 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) 98735 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chrX-130 chrX 150568393 150568603 + 22.5 0.000 promoter-TSS (NM_000252) promoter-TSS (NM_000252) -99 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr7-750 chr7 112480444 112480654 + 22.5 0.000 promoter-TSS (NM_001134468) promoter-TSS (NM_001134468) -304 NM_001134468 286006 Hs.396189 NM_182597 ENSG00000181016 LSMEM1 C7orf53 leucine rich single-pass membrane protein 1 protein-coding chr4-808 chr4 94504670 94504880 + 22.5 0.000 intron (NM_001256428, intron 2 of 11) L3|LINE|CR1 52833 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr5-753 chr5 136057385 136057595 + 22.5 0.000 intron (NM_000358, intron 12 of 16) intron (NM_000358, intron 12 of 16) 23108 NR_030583 100126299 NR_030583 ENSG00000278815 VTRNA2-1 CBL-3|CBL3|MIR886|MIRN886|VTRNA2|hsa-mir-886|hvg-5|nc886|pre-miR-886|svtRNA2-1a vault RNA 2-1 ncRNA chr17-781 chr17 78921520 78921730 + 22.5 0.000 intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 3762 NM_003255 7077 Hs.633514 NM_003255 ENSG00000035862 TIMP2 CSC-21K|DDC8 TIMP metallopeptidase inhibitor 2 protein-coding chr2-649 chr2 231056652 231056862 + 22.5 0.000 promoter-TSS (NR_034059) promoter-TSS (NR_034059) -107 NM_001191037 5707 Hs.3887 NM_002807 ENSG00000173692 PSMD1 P112|Rpn2|S1 proteasome 26S subunit, non-ATPase 1 protein-coding chr17-415 chr17 8295299 8295509 + 22.5 0.000 promoter-TSS (NM_001320872) promoter-TSS (NM_001320872) -4 NM_001320870 399512 Hs.118918 NM_201520 ENSG00000125434 SLC25A35 - solute carrier family 25 member 35 protein-coding chr1-1064 chr1 205372379 205372589 + 22.5 0.000 promoter-TSS (NR_038425) promoter-TSS (NR_038425) -768 NR_038425 284576 Hs.585440 NR_038425 ENSG00000226235 LEMD1-AS1 - LEMD1 antisense RNA 1 ncRNA chr2-921 chr2 231200916 231201126 + 22.5 0.000 intron (NM_001352755, intron 1 of 20) intron (NM_001352755, intron 1 of 20) 2390 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr11-302 chr11 67289012 67289222 + 22.5 0.000 promoter-TSS (NM_001347901) promoter-TSS (NM_001347901) -186 NM_001347901 338692 Hs.438673 NM_207354 ENSG00000172932 ANKRD13D - ankyrin repeat domain 13D protein-coding chr12-768 chr12 110546437 110546647 + 22.5 0.000 intron (NM_139283, intron 2 of 5) intron (NM_139283, intron 2 of 5) 36776 NR_138550 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr14-163 chr14 24429955 24430165 + 22.5 0.000 promoter-TSS (NM_001039771) promoter-TSS (NM_001039771) 106 NM_015299 23351 Hs.713590 NM_015299 ENSG00000100441 KHNYN KIAA0323 KH and NYN domain containing protein-coding chr21-180 chr21 28253418 28253628 + 22.5 0.000 Intergenic Intergenic -24856 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr6-555 chr6 36667156 36667366 + 22.5 0.000 Intergenic Intergenic 7865 NR_109836 101154753 Hs.741557 NR_109836 ENSG00000281450 PANDAR PANDA promoter of CDKN1A antisense DNA damage activated RNA ncRNA chr13-343 chr13 50411264 50411474 + 22.5 0.000 intron (NR_109974, intron 3 of 6) L2b|LINE|L2 116080 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr7-478 chr7 141586098 141586308 + 22.5 0.000 intron (NM_018238, intron 2 of 15) intron (NM_018238, intron 2 of 15) 34793 NM_018238 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr7-731 chr7 48154914 48155124 + 22.5 0.000 Intergenic L1MEf|LINE|L1 -16439 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr4-381 chr4 174283218 174283428 + 22.5 0.000 promoter-TSS (NM_001145314) promoter-TSS (NM_001145314) -581 NM_001145314 80817 Hs.555989 NM_030633 ENSG00000164118 CEP44 KIAA1712|PS1TP3 centrosomal protein 44 protein-coding chr1-1596 chr1 52574674 52574884 + 22.5 0.000 Intergenic L2c|LINE|L2 -21687 NM_001009881 23318 Hs.655407 NM_015269 ENSG00000134744 TUT4 PAPD3|TENT3A|ZCCHC11 terminal uridylyl transferase 4 protein-coding chr5-787 chr5 9013913 9014123 + 22.5 0.000 Intergenic Intergenic 39877 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr10-612 chr10 97612508 97612718 + 22.5 0.000 3' UTR (NM_001134670, exon 3 of 3) 3' UTR (NM_001134670, exon 3 of 3) 20887 NM_178832 118812 Hs.217409 NM_178832 ENSG00000171160 MORN4 C10orf83|UTA|bA548K23.4|rtp MORN repeat containing 4 protein-coding chr1-303 chr1 21345312 21345522 + 22.5 0.000 promoter-TSS (NM_001113348) promoter-TSS (NM_001113348) 87 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr7-868 chr7 90298183 90298393 + 22.5 0.000 intron (NM_001039706, intron 16 of 22) intron (NM_001039706, intron 16 of 22) -36935 NR_110085 101927446 Hs.734999 NR_110085 ENSG00000105793 LOC101927446 - uncharacterized LOC101927446 ncRNA chr10-270 chr10 72626068 72626278 + 22.5 0.000 promoter-TSS (NM_001363513) promoter-TSS (NM_001363513) 18 NM_001363513 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr9-273 chr9 136109835 136110045 + 22.5 0.000 Intergenic Intergenic 8491 NM_001256526 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr17-1172 chr17 42398451 42398661 + 22.5 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -10061 NM_139276 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr11-725 chr11 66728950 66729160 + 22.5 0.000 Intergenic Intergenic -7656 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr11-960 chr11 74288207 74288417 + 22.5 0.000 intron (NR_110031, intron 5 of 11) intron (NR_110031, intron 5 of 11) -23050 NR_120556 101928580 Hs.569025 NR_120556 ENSG00000246211 P4HA3-AS1 - P4HA3 antisense RNA 1 ncRNA chr2-1598 chr2 150529536 150529746 + 22.5 0.000 Intergenic Intergenic -41946 NM_001254738 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr1-1387 chr1 115929949 115930159 + 22.5 0.000 intron (NR_125970, intron 2 of 4) intron (NR_125970, intron 2 of 4) 10678 NR_125969 101928995 Hs.559119 NR_125969 ENSG00000228127 LINC01649 - long intergenic non-protein coding RNA 1649 ncRNA chr19-596 chr19 47778204 47778414 + 22.5 0.000 promoter-TSS (NM_003009) promoter-TSS (NM_003009) -394 NM_003009 6415 Hs.631549 NM_003009 ENSG00000178980 SELENOW SEPW1|selW selenoprotein W protein-coding chr1-1927 chr1 8090309 8090519 + 22.5 0.000 Intergenic Intergenic -64105 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr17-755 chr17 74569625 74569835 + 22.5 0.000 Intergenic Intergenic -2387 NM_001324073 100130520 NM_001324073 ENSG00000284690 CD300H CD300Hs CD300H molecule (gene/pseudogene) protein-coding chr19-457 chr19 518144 518354 + 22.5 0.000 intron (NM_033513, intron 1 of 1) intron (NM_033513, intron 1 of 1) 10752 NM_033513 91978 Hs.369613 NM_033513 ENSG00000141933 TPGS1 C19orf20|GTRGEO22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding chr1-1539 chr1 206030765 206030975 + 22.5 0.000 Intergenic Intergenic -6975 NM_001910 1510 Hs.644082 NM_001910 ENSG00000196188 CTSE CATE cathepsin E protein-coding chr2-776 chr2 64998689 64998899 + 22.5 0.000 intron (NM_003038, intron 1 of 7) intron (NM_003038, intron 1 of 7) 9395 NM_003038 6509 Hs.654352 NM_003038 ENSG00000115902 SLC1A4 ASCT1|SATT|SPATCCM solute carrier family 1 member 4 protein-coding chr17-470 chr17 78782468 78782678 + 22.5 0.000 promoter-TSS (NM_017456) promoter-TSS (NM_017456) -231 NM_004762 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr3-619 chr3 172516889 172517099 + 22.5 0.000 TTS (NM_001190943) TTS (NM_001190943) 6436 NM_001190942 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL TNF superfamily member 10 protein-coding chr10-766 chr10 119250737 119250947 + 22.5 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 43271 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr10-321 chr10 124733242 124733452 + 22.5 0.000 intron (NM_014661, intron 1 of 4) intron (NM_014661, intron 1 of 4) 11031 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr16-798 chr16 87086343 87086553 + 22.5 0.000 Intergenic Intergenic 28664 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr1-667 chr1 226309181 226309391 + 22.5 0.000 promoter-TSS (NM_001366245) promoter-TSS (NM_001366245) -122 NM_001366245 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr3-1389 chr3 73680739 73680949 + 22.5 0.000 Intergenic Intergenic -55903 NM_015009 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr10-690 chr10 32929769 32929979 + 22.5 0.000 exon (NM_033668, exon 3 of 16) exon (NM_033668, exon 3 of 16) 5684 NM_033668 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr2-957 chr2 74465202 74465412 + 22.5 0.000 promoter-TSS (NM_006302) promoter-TSS (NM_006302) 75 NM_006302 7841 Hs.516119 NM_006302 ENSG00000115275 MOGS CDG2B|CWH41|DER7|GCS1 mannosyl-oligosaccharide glucosidase protein-coding chr12-652 chr12 51714830 51715040 + 22.5 0.000 intron (NM_001369788, intron 11 of 25) intron (NM_001369788, intron 11 of 25) 116982 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chr10-976 chr10 113107099 113107309 + 22.5 0.000 intron (NM_001146283, intron 5 of 12) intron (NM_001146283, intron 5 of 12) -19429 NM_001349871 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr2-549 chr2 127218011 127218221 + 22.5 0.000 intron (NM_001367502, intron 1 of 8) intron (NM_001367502, intron 1 of 8) 2183 NM_001367502 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr11-568 chr11 45847214 45847424 + 22.5 0.000 promoter-TSS (NM_021117) promoter-TSS (NM_021117) -156 NM_021117 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr15-527 chr15 57395419 57395629 + 22.5 0.000 intron (NM_032866, intron 1 of 18) intron (NM_032866, intron 1 of 18) 19019 NM_001252335 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr18-342 chr18 58004460 58004670 + 22.5 0.000 Intergenic Intergenic -39661 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr4-131 chr4 38867499 38867709 + 22.5 0.000 promoter-TSS (NM_001350634) promoter-TSS (NM_001350634) -202 NM_001350635 92689 Hs.476517 NM_138389 ENSG00000197712 FAM114A1 Noxp20 family with sequence similarity 114 member A1 protein-coding chr7-787 chr7 5429623 5429833 + 22.5 0.000 promoter-TSS (NM_001354886) promoter-TSS (NM_001354886) -801 NM_001354886 100129484 Hs.147507 NM_001354886 LOC100129484 - uncharacterized LOC100129484 protein-coding chr18-148 chr18 54357887 54358097 + 22.5 0.000 promoter-TSS (NM_001288980) promoter-TSS (NM_001288980) 75 NR_110234 162681 Hs.208701 NM_173529 ENSG00000166845 C18orf54 LAS2 chromosome 18 open reading frame 54 protein-coding chr17-622 chr17 29145390 29145600 + 22.5 0.000 intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) -5106 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr19-599 chr19 1445289 1445499 + 22.5 0.000 Intergenic CpG -4755 NM_005883 10297 Hs.446376 NM_005883 ENSG00000115266 APC2 APCL APC regulator of WNT signaling pathway 2 protein-coding chr4-330 chr4 110196806 110197016 + 22.5 0.000 intron (NM_001130721, intron 2 of 4) CpG 1704 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr8-304 chr8 42492495 42492705 + 22.5 0.000 intron (NM_006749, intron 1 of 10) intron (NM_006749, intron 1 of 10) 8631 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr6-155 chr6 87155309 87155519 + 22.5 0.000 promoter-TSS (NM_001351444) promoter-TSS (NM_001351444) -151 NM_001351444 23036 Hs.444800 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding chr6-413 chr6 96897722 96897932 + 22.5 0.000 promoter-TSS (NM_014165) promoter-TSS (NM_014165) 64 NM_014165 29078 Hs.512144 NM_014165 ENSG00000123545 NDUFAF4 C6orf66|HRPAP20|HSPC125|MC1DN15|My013|bA22L21.1 NADH:ubiquinone oxidoreductase complex assembly factor 4 protein-coding chr7-743 chr7 78296173 78296383 + 22.5 0.000 intron (NM_001301128, intron 9 of 20) L2a|LINE|L2 -50964 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr10-671 chr10 79380151 79380361 + 22.5 0.000 Intergenic Intergenic 32787 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr5-444 chr5 172103017 172103227 + 22.5 0.000 intron (NM_005990, intron 7 of 18) intron (NM_005990, intron 7 of 18) 85102 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr5-883 chr5 73968784 73968994 + 22.5 0.000 Intergenic Intergenic 155343 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr20-172 chr20 34112358 34112568 + 22.5 0.000 promoter-TSS (NM_001316363) promoter-TSS (NM_001316363) -220 NM_001316363 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr1-1384 chr1 96416339 96416549 + 22.5 0.000 Intergenic Intergenic -42319 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr22-402 chr22 45906133 45906343 + 22.5 0.000 Intergenic Intergenic 70924 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr13-425 chr13 37656691 37656901 + 22.5 0.000 intron (NM_003306, intron 6 of 10) intron (NM_003306, intron 6 of 10) -57952 NM_001286666 10631 Hs.136348 NM_006475 ENSG00000133110 POSTN OSF-2|OSF2|PDLPOSTN|PN periostin protein-coding chr1-720 chr1 165768825 165769035 + 22.5 0.000 promoter-TSS (NR_125374) promoter-TSS (NR_125374) 1 NR_125374 100147773 Hs.633824 NR_125374 TMCO1-AS1 - TMCO1 antisense RNA 1 ncRNA chr2-616 chr2 27682396 27682606 + 22.5 0.000 intron (NM_018158, intron 9 of 13) intron (NM_018158, intron 9 of 13) -18661 NM_001282730 9913 Hs.6232 NM_014860 ENSG00000119760 SUPT7L SPT7L|STAF65|STAF65(gamma)|STAF65G|SUPT7H SPT7 like, STAGA complex gamma subunit protein-coding chr10-829 chr10 103645490 103645700 + 22.5 0.000 intron (NM_001365079, intron 2 of 8) intron (NM_001365079, intron 2 of 8) 32620 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-729 chr2 25342450 25342660 + 22.5 0.000 promoter-TSS (NM_175630) promoter-TSS (NM_175630) 35 NM_175629 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr7-349 chr7 39833302 39833512 + 22.5 0.000 Intergenic CpG 99839 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr2-1345 chr2 196601525 196601735 + 22.5 0.000 Intergenic Intergenic -8076 NM_001348768 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr10-349 chr10 43408832 43409042 + 22.5 0.000 promoter-TSS (NM_001098205) promoter-TSS (NM_001098205) -53 NM_001098205 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr15-554 chr15 44231962 44232172 + 22.5 0.000 Intergenic Intergenic -36773 NR_104455 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr1-1097 chr1 116115541 116115751 + 22.5 0.000 intron (NM_152367, intron 2 of 6) Chap1_Mam|DNA|hAT-Charlie 3891 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr1-953 chr1 39026231 39026441 + 22.5 0.000 promoter-TSS (NM_004552) promoter-TSS (NM_004552) -14 NM_004552 4725 Hs.632385 NM_004552 ENSG00000168653 NDUFS5 CI-15k|CI15K NADH:ubiquinone oxidoreductase subunit S5 protein-coding chr19-767 chr19 53333372 53333582 + 22.5 0.000 promoter-TSS (NM_138374) promoter-TSS (NM_138374) -242 NM_001321522 91664 Hs.720672 NM_138374 ENSG00000213799 ZNF845 - zinc finger protein 845 protein-coding chr16-680 chr16 1708888 1709098 + 22.5 0.000 intron (NM_001040439, intron 1 of 30) intron (NM_001040439, intron 1 of 30) 2798 NM_015133 23162 Hs.207763 NM_015133 ENSG00000138834 MAPK8IP3 JIP-3|JIP3|JSAP1|NEDBA|SYD2|syd mitogen-activated protein kinase 8 interacting protein 3 protein-coding chr3-728 chr3 50268992 50269202 + 22.5 0.000 promoter-TSS (NM_001290061) promoter-TSS (NM_001290061) -50 NM_001290060 7869 Hs.82222 NM_004636 ENSG00000012171 SEMA3B LUCA-1|SEMA5|SEMAA|SemA|semaV semaphorin 3B protein-coding chr5-807 chr5 111583080 111583290 + 22.5 0.000 intron (NR_040093, intron 1 of 6) intron (NR_040093, intron 1 of 6) -70588 NR_131752 134429 Hs.93842 NM_139164 ENSG00000164211 STARD4 - StAR related lipid transfer domain containing 4 protein-coding chr11-799 chr11 95067242 95067452 + 22.5 0.000 non-coding (NR_103726, exon 1 of 2) non-coding (NR_103726, exon 1 of 2) 470 NM_032102 10929 Hs.476680 NM_032102 ENSG00000263465 SRSF8 DSM-1|SFRS2B|SRP46 serine and arginine rich splicing factor 8 protein-coding chr18-76 chr18 50287707 50287917 + 22.5 0.000 5' UTR (NM_014593, exon 1 of 15) 5' UTR (NM_014593, exon 1 of 15) 510 NM_014593 30827 Hs.180933 NM_014593 ENSG00000154832 CXXC1 2410002I16Rik|5830420C16Rik|CFP1|CGBP|HsT2645|PCCX1|PHF18|SPP1|ZCGPC1|hCGBP CXXC finger protein 1 protein-coding chr4-743 chr4 122783344 122783554 + 22.5 0.000 Intergenic Intergenic -43259 NM_002006 2247 Hs.284244 NM_002006 ENSG00000138685 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 protein-coding chr13-161 chr13 49313979 49314189 + 22.5 0.000 intron (NM_001079670, intron 10 of 10) intron (NM_001079670, intron 10 of 10) 66159 NM_030911 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr16-599 chr16 31064964 31065174 + 22.5 0.000 promoter-TSS (NM_001172669) promoter-TSS (NM_001172669) 19 NM_001172669 79759 Hs.102928 NM_024706 ENSG00000167394 ZNF668 - zinc finger protein 668 protein-coding chr1-1375 chr1 67948312 67948522 + 22.5 0.000 intron (NR_040077, intron 1 of 9) L2c|LINE|L2 103214 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding chr2-1112 chr2 169665532 169665742 + 22.5 0.000 intron (NM_001085447, intron 4 of 8) MER83|LTR|ERV1 28768 NM_001085447 129881 Hs.370111 NM_001085447 ENSG00000154479 CCDC173 C2orf77 coiled-coil domain containing 173 protein-coding chr20-283 chr20 63653200 63653410 + 22.5 0.000 promoter-TSS (NM_001276310) promoter-TSS (NM_001276310) 119 NM_015894 50861 Hs.639609 NM_015894 ENSG00000197457 STMN3 SCLIP stathmin 3 protein-coding chr8-229 chr8 140636115 140636325 + 22.5 0.000 promoter-TSS (NM_012154) promoter-TSS (NM_012154) -587 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr1-1613 chr1 100955482 100955692 + 22.5 0.000 intron (NM_133496, intron 8 of 10) intron (NM_133496, intron 8 of 10) 59497 NM_133496 148867 Hs.533903 NM_133496 ENSG00000162695 SLC30A7 ZNT7|ZnT-7|ZnTL2 solute carrier family 30 member 7 protein-coding chr2-329 chr2 32356958 32357168 + 22.5 0.000 promoter-TSS (NM_016252) promoter-TSS (NM_016252) 35 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr1-1599 chr1 53982570 53982780 + 22.5 0.000 Intergenic L1MEc|LINE|L1 35511 NM_001010978 388633 Hs.439583 NM_001010978 ENSG00000203985 LDLRAD1 - low density lipoprotein receptor class A domain containing 1 protein-coding chr10-609 chr10 80530343 80530553 + 22.5 0.000 3' UTR (NM_001351267, exon 11 of 11) 3' UTR (NM_001351267, exon 11 of 11) 5494 NR_120661 101929574 Hs.593663 NR_120661 ENSG00000226659 LOC101929574 - uncharacterized LOC101929574 ncRNA chr2-536 chr2 232901945 232902155 + 22.5 0.000 intron (NM_001114090, intron 3 of 12) intron (NM_001114090, intron 3 of 12) 26101 NM_001114090 25791 Hs.97316 NM_019850 ENSG00000066248 NGEF ARHGEF27|EPHEXIN neuronal guanine nucleotide exchange factor protein-coding chr3-1270 chr3 190064286 190064496 + 22.5 0.000 intron (NM_001134418, intron 1 of 14) intron (NM_001134418, intron 1 of 14) 56506 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr12-747 chr12 20212791 20213001 + 22.5 0.000 Intergenic Intergenic -84995 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr1-924 chr1 110086856 110087066 + 22.5 0.000 intron (NR_126382, intron 1 of 3) intron (NR_126382, intron 1 of 3) 4273 NR_126382 104355139 Hs.628193 NR_126382 ENSG00000258673 LINC01397 - long intergenic non-protein coding RNA 1397 ncRNA chr7-542 chr7 101218096 101218306 + 22.5 0.000 promoter-TSS (NM_006349) promoter-TSS (NM_006349) 36 NM_006349 10467 Hs.211079 NM_006349 ENSG00000106400 ZNHIT1 CG1I|ZNFN4A1 zinc finger HIT-type containing 1 protein-coding chr2-1619 chr2 231161993 231162203 + 22.5 0.000 intron (NM_001191037, intron 20 of 23) intron (NM_001191037, intron 20 of 23) -36533 NM_001271466 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr7-522 chr7 54759085 54759295 + 22.5 0.000 promoter-TSS (NR_110040) promoter-TSS (NR_110040) 21 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr1-735 chr1 3695784 3695994 + 22.5 0.000 intron (NM_001204189, intron 1 of 8) L2b|LINE|L2 -2157 NM_001204192 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr18-188 chr18 49013319 49013529 + 22.5 0.000 Intergenic Intergenic -10279 NR_148999 100129878 Hs.437704 NR_148999 ENSG00000264269 LOC100129878 - uncharacterized LOC100129878 ncRNA chr16-654 chr16 87207507 87207717 + 22.4 0.000 Intergenic Intergenic -4503 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr8-543 chr8 140956089 140956299 + 22.4 0.000 intron (NM_001352719, intron 1 of 32) HAL1|LINE|L1 44810 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr12-671 chr12 780293 780503 + 22.4 0.000 intron (NM_001184985, intron 1 of 27) intron (NM_001184985, intron 1 of 27) 27475 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr1-388 chr1 166839273 166839483 + 22.4 0.000 promoter-TSS (NM_001314014) promoter-TSS (NM_001314014) -97 NM_001314014 57645 Hs.432752 NM_017542 ENSG00000143157 POGK BASS2|KRBOX2|LST003 pogo transposable element derived with KRAB domain protein-coding chr13-325 chr13 44332103 44332313 + 22.4 0.000 Intergenic Intergenic -41442 NM_001346980 387923 Hs.377972 NM_001010897 ENSG00000151778 SERP2 C13orf21|bA269C23.1 stress associated endoplasmic reticulum protein family member 2 protein-coding chr12-213 chr12 56688308 56688518 + 22.4 0.000 promoter-TSS (NM_006601) promoter-TSS (NM_006601) -5 NM_001282604 10728 Hs.50425 NM_006601 ENSG00000110958 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 protein-coding chr1-2126 chr1 209884785 209884995 + 22.4 0.000 Intergenic Intergenic -53284 NR_027459 255928 Hs.658866 NM_153262 ENSG00000143469 SYT14 SCAR11|sytXIV synaptotagmin 14 protein-coding chr22-497 chr22 30606841 30607051 + 22.4 0.000 promoter-TSS (NM_001282328) promoter-TSS (NM_001282328) 67 NM_001282328 23481 Hs.517543 NM_014303 ENSG00000100029 PES1 NOP7|PES pescadillo ribosomal biogenesis factor 1 protein-coding chr5-1466 chr5 72860611 72860821 + 22.4 0.000 intron (NM_001364293, intron 4 of 24) intron (NM_001364293, intron 4 of 24) 12577 NM_153188 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chr4-377 chr4 124904195 124904405 + 22.4 0.000 Intergenic Intergenic -191568 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr8-415 chr8 131856837 131857047 + 22.4 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -47151 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr5-673 chr5 10467447 10467657 + 22.4 0.000 Intergenic MER4C|LTR|ERV1 -10485 NR_106747 102465138 NR_106747 ENSG00000277073 MIR6131 hsa-mir-6131 microRNA 6131 ncRNA chr12-649 chr12 47604564 47604774 + 22.4 0.000 Intergenic Intergenic 101361 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr19-919 chr19 58228363 58228573 + 22.4 0.000 promoter-TSS (NM_001320786) promoter-TSS (NM_001320786) -213 NM_001320771 27300 Hs.438994 NM_014480 ENSG00000198131 ZNF544 - zinc finger protein 544 protein-coding chr12-1095 chr12 112096786 112096996 + 22.4 0.000 intron (NM_024953, intron 1 of 23) intron (NM_024953, intron 1 of 23) 11892 NM_024953 80018 Hs.530941 NM_024953 ENSG00000111300 NAA25 C12orf30|MDM20|NAP1 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding chr14-448 chr14 65002906 65003116 + 22.4 0.000 intron (NM_002028, intron 1 of 11) LTR26C|LTR|ERV1 16116 NM_002028 2342 Hs.325531 NM_002028 ENSG00000257365 FNTB FPTB farnesyltransferase, CAAX box, beta protein-coding chr4-443 chr4 21181707 21181917 + 22.4 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) 122094 NM_147183 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr16-900 chr16 17579356 17579566 + 22.4 0.000 Intergenic Intergenic -108501 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr15-88 chr15 90680644 90680854 + 22.4 0.000 intron (NR_120372, intron 2 of 3) (A)n|Simple_repeat|Simple_repeat 20515 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr19-713 chr19 37779476 37779686 + 22.4 0.000 promoter-TSS (NM_001172689) promoter-TSS (NM_001172689) 9 NM_001172692 126231 Hs.531262 NM_152360 ENSG00000189144 ZNF573 - zinc finger protein 573 protein-coding chr20-290 chr20 34705668 34705878 + 22.4 0.000 intron (NM_001329429, intron 2 of 4) intron (NM_001329429, intron 2 of 4) 1054 NM_001329431 58476 Hs.516994 NM_021202 ENSG00000078804 TP53INP2 C20orf110|DOR|PIG-U|PIGU|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding chr19-999 chr19 48657234 48657444 + 22.4 0.000 intron (NR_004401, intron 1 of 4) intron (NR_004401, intron 1 of 4) -11152 NR_136241 770 Hs.428446 NM_001217 ENSG00000063180 CA11 CA-RP|CA-RP II|CA-XI|CARP-2|CARPX1 carbonic anhydrase 11 protein-coding chr10-449 chr10 125153859 125154069 + 22.4 0.000 intron (NM_001290214, intron 1 of 10) intron (NM_001290214, intron 1 of 10) 4813 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr1-1821 chr1 224542877 224543087 + 22.4 0.000 intron (NM_001322304, intron 2 of 6) MER21C|LTR|ERVL -73335 NR_136287 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr13-221 chr13 113856754 113856964 + 22.4 0.000 intron (NM_000820, intron 2 of 14) intron (NM_000820, intron 2 of 14) 7217 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr3-858 chr3 75294174 75294384 + 22.4 0.000 Intergenic Intergenic 79803 NR_039646 100616394 NR_039646 ENSG00000284252 MIR4444-1 MIR4444|hsa-mir-4444-1|miR-4444-1 microRNA 4444-1 ncRNA chr1-434 chr1 226408119 226408329 + 22.4 0.000 promoter-TSS (NM_001618) promoter-TSS (NM_001618) -131 NM_001618 142 Hs.177766 NM_001618 ENSG00000143799 PARP1 ADPRT|ADPRT 1|ADPRT1|ARTD1|PARP|PARP-1|PPOL|pADPRT-1 poly(ADP-ribose) polymerase 1 protein-coding chr4-581 chr4 20984149 20984359 + 22.4 0.000 promoter-TSS (NM_001363504) promoter-TSS (NM_001363504) -245 NM_001363504 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr10-583 chr10 62584303 62584513 + 22.4 0.000 intron (NM_199452, intron 1 of 6) intron (NM_199452, intron 1 of 6) 63960 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr15-103 chr15 74938014 74938224 + 22.4 0.000 promoter-TSS (NM_004255) promoter-TSS (NM_004255) -46 NM_004255 9377 Hs.401903 NM_004255 ENSG00000178741 COX5A COX|COX-VA|VA cytochrome c oxidase subunit 5A protein-coding chr17-573 chr17 44123823 44124033 + 22.4 0.000 promoter-TSS (NM_005474) promoter-TSS (NM_005474) -287 NM_005474 10014 Hs.438782 NM_005474 ENSG00000108840 HDAC5 HD5|NY-CO-9 histone deacetylase 5 protein-coding chr6-561 chr6 132998667 132998877 + 22.4 0.000 Intergenic L1MEd|LINE|L1 -89308 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr10-257 chr10 35642309 35642519 + 22.4 0.000 promoter-TSS (NM_031866) promoter-TSS (NM_031866) -980 NM_031866 8325 Hs.302634 NM_031866 ENSG00000177283 FZD8 FZ-8|hFZ8 frizzled class receptor 8 protein-coding chr5-1035 chr5 154370158 154370368 + 22.4 0.000 intron (NM_198321, intron 4 of 11) L2b|LINE|L2 23157 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr8-409 chr8 55844794 55845004 + 22.4 0.000 Intergenic Intergenic -34936 NM_002350 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chr2-1057 chr2 195534376 195534586 + 22.4 0.000 Intergenic Intergenic -122477 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr9-633 chr9 115205253 115205463 + 22.4 0.000 intron (NR_163556, intron 1 of 7) intron (NR_163556, intron 1 of 7) 63540 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr20-204 chr20 2814736 2814946 + 22.4 0.000 promoter-TSS (NM_080739) promoter-TSS (NM_080739) -146 NM_001256538 128653 Hs.352187 NM_080739 ENSG00000258713 C20orf141 dJ860F19.4 chromosome 20 open reading frame 141 protein-coding chr9-770 chr9 127049097 127049307 + 22.4 0.000 intron (NM_001322323, intron 5 of 16) intron (NM_001322323, intron 5 of 16) 73433 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr14-512 chr14 89956354 89956564 + 22.4 0.000 intron (NM_001330205, intron 1 of 14) MIR|SINE|MIR 532 NM_001330205 55775 Hs.209945 NM_018319 ENSG00000042088 TDP1 - tyrosyl-DNA phosphodiesterase 1 protein-coding chr11-880 chr11 70016856 70017066 + 22.4 0.000 Intergenic L2a|LINE|L2 46963 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr6-365 chr6 1094376 1094586 + 22.4 0.000 intron (NR_027116, intron 1 of 3) intron (NR_027116, intron 1 of 3) 6851 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr10-628 chr10 43395874 43396084 + 22.4 0.000 intron (NM_001098208, intron 1 of 2) intron (NM_001098208, intron 1 of 2) 852 NM_001098208 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr9-460 chr9 131350245 131350455 + 22.4 0.000 Intergenic Intergenic 60627 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr12-468 chr12 6383977 6384187 + 22.4 0.000 promoter-TSS (NM_002342) promoter-TSS (NM_002342) -80 NM_002342 4055 Hs.1116 NM_002342 ENSG00000111321 LTBR D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3 lymphotoxin beta receptor protein-coding chr10-502 chr10 102120476 102120686 + 22.4 0.000 promoter-TSS (NM_001321612) promoter-TSS (NM_001321612) -108 NM_001113407 8861 Hs.454418 NM_003893 ENSG00000198728 LDB1 CLIM-2|CLIM2|LDB-1|NLI LIM domain binding 1 protein-coding chr19-782 chr19 47289513 47289723 + 22.4 0.000 Intergenic MER66B|LTR|ERV1 14733 NM_178511 255783 Hs.128690 NM_178511 ENSG00000257704 INAFM1 PRR24 InaF motif containing 1 protein-coding chr4-416 chr4 122798140 122798350 + 22.4 0.000 Intergenic Intergenic -28463 NM_002006 2247 Hs.284244 NM_002006 ENSG00000138685 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 protein-coding chr3-345 chr3 23946025 23946235 + 22.4 0.000 promoter-TSS (NM_001145425) promoter-TSS (NM_001145425) 9 NM_001145425 9975 Hs.37288 NM_005126 ENSG00000174738 NR1D2 BD73|EAR-1R|REVERBB|REVERBbeta|RVR nuclear receptor subfamily 1 group D member 2 protein-coding chr7-912 chr7 130363539 130363749 + 22.4 0.000 intron (NM_080385, intron 10 of 12) intron (NM_080385, intron 10 of 12) 3483 NR_133928 105375504 Hs.436058 NR_133928 LOC105375504 - uncharacterized LOC105375504 ncRNA chr4-213 chr4 5638449 5638659 + 22.4 0.000 intron (NM_147127, intron 10 of 21) intron (NM_147127, intron 10 of 21) 70005 NM_147127 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr3-452 chr3 15859690 15859900 + 22.4 0.000 promoter-TSS (NM_015199) promoter-TSS (NM_015199) 19 NM_001349279 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr11-385 chr11 64878524 64878734 + 22.4 0.000 promoter-TSS (NM_006795) promoter-TSS (NM_006795) -8 NM_006795 10938 Hs.523774 NM_006795 ENSG00000110047 EHD1 H-PAST|HPAST1|PAST|PAST1 EH domain containing 1 protein-coding chr7-597 chr7 76069224 76069434 + 22.4 0.000 Intergenic Intergenic 21223 NM_001282404 4191 Hs.520967 NM_005918 ENSG00000146701 MDH2 EIEE51|M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2 protein-coding chr15-298 chr15 78149407 78149617 + 22.4 0.000 intron (NM_005530, intron 1 of 10) CpG 150 NM_005530 3419 Hs.591110 NM_005530 ENSG00000166411 IDH3A - isocitrate dehydrogenase (NAD(+)) 3 alpha protein-coding chr21-82 chr21 29002682 29002892 + 22.4 0.000 Intergenic CpG -9910 NM_015565 26046 Hs.288773 NM_015565 ENSG00000198862 LTN1 C21orf10|C21orf98|RNF160|ZNF294 listerin E3 ubiquitin protein ligase 1 protein-coding chr5-515 chr5 113489432 113489642 + 22.4 0.000 Intergenic Intergenic -1084 NM_001085377 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr15-550 chr15 40765454 40765664 + 22.4 0.000 3' UTR (NM_018163, exon 11 of 11) 3' UTR (NM_018163, exon 11 of 11) 1491 NM_005258 2644 Hs.631717 NM_005258 ENSG00000137880 GCHFR GFRP|HsT16933|P35 GTP cyclohydrolase I feedback regulator protein-coding chr10-393 chr10 36534763 36534973 + 22.4 0.000 Intergenic LTR102_Mam|LTR|ERVL -590989 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr2-405 chr2 28566759 28566969 + 22.4 0.000 intron (NR_138141, intron 1 of 35) CpG 507 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr9-426 chr9 5450477 5450687 + 22.4 0.000 promoter-TSS (NM_001314029) promoter-TSS (NM_001314029) 40 NM_001314029 29126 Hs.521989 NM_014143 ENSG00000120217 CD274 B7-H|B7H1|PD-L1|PDCD1L1|PDCD1LG1|PDL1|hPD-L1 CD274 molecule protein-coding chr3-988 chr3 17175484 17175694 + 22.4 0.000 intron (NM_014744, intron 19 of 21) intron (NM_014744, intron 19 of 21) 242393 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr16-524 chr16 628676 628886 + 22.4 0.000 3' UTR (NM_001172663, exon 7 of 7) 3' UTR (NM_001172663, exon 7 of 7) -2204 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr16-880 chr16 73202349 73202559 + 22.4 0.000 Intergenic Intergenic -58007 NM_207385 388289 Hs.371893 NM_207385 C16orf47 - chromosome 16 open reading frame 47 protein-coding chr17-394 chr17 40099122 40099332 + 22.4 0.000 intron (NM_021724, intron 1 of 7) CpG 1362 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|REVERBA|REVERBalpha|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr1-1113 chr1 10510762 10510972 + 22.4 0.000 intron (NM_004565, intron 2 of 8) intron (NM_004565, intron 2 of 8) 35917 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr7-475 chr7 116716858 116717068 + 22.4 0.000 intron (NM_000245, intron 2 of 20) intron (NM_000245, intron 2 of 20) 44767 NM_001324401 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr16-721 chr16 53092052 53092262 + 22.4 0.000 intron (NM_025134, intron 1 of 38) intron (NM_025134, intron 1 of 38) 37166 NM_025134 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr19-804 chr19 3470811 3471021 + 22.4 0.000 Intergenic L2a|LINE|L2 9609 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr3-785 chr3 100386684 100386894 + 22.4 0.000 intron (NM_014820, intron 2 of 11) intron (NM_014820, intron 2 of 11) 14300 NM_014820 9868 Hs.227253 NM_014820 ENSG00000154174 TOMM70 TOMM70A|Tom70 translocase of outer mitochondrial membrane 70 protein-coding chr17-608 chr17 17781205 17781415 + 22.4 0.000 intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) -1781 NR_024007 140771 Hs.352643 NM_144774 ENSG00000226746 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 ncRNA chr9-606 chr9 129607745 129607955 + 22.4 0.000 Intergenic Intergenic -1034 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chrX-58 chrX 118345836 118346046 + 22.4 0.000 promoter-TSS (NM_001184965) promoter-TSS (NM_001184965) -132 NM_001184966 54521 Hs.98510 NM_019045 ENSG00000131725 WDR44 RAB11BP|RPH11|SYM-4 WD repeat domain 44 protein-coding chr19-764 chr19 48568523 48568733 + 22.4 0.000 intron (NM_177973, intron 1 of 6) intron (NM_177973, intron 1 of 6) -7108 NM_004605 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr1-800 chr1 227563532 227563742 + 22.4 0.000 promoter-TSS (NM_001367910) promoter-TSS (NM_001367910) 81 NM_001367909 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr1-1594 chr1 48761523 48761733 + 22.4 0.000 intron (NR_146232, intron 1 of 4) intron (NR_146232, intron 1 of 4) 15263 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr16-486 chr16 11977690 11977900 + 22.4 0.000 intron (NM_032167, intron 1 of 20) intron (NM_032167, intron 1 of 20) 1061 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr7-751 chr7 115008760 115008970 + 22.4 0.000 intron (NM_001166345, intron 4 of 4) intron (NM_001166345, intron 4 of 4) -70093 NR_120521 102724386 Hs.352357 NR_120521 ENSG00000225535 LINC01393 - long intergenic non-protein coding RNA 1393 ncRNA chr3-1253 chr3 162441790 162442000 + 22.4 0.000 Intergenic L2a|LINE|L2 861406 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr22-290 chr22 20418312 20418522 + 22.4 0.000 Intergenic 7SLRNA|srpRNA|srpRNA 19408 NM_182895 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chr5-309 chr5 19988059 19988269 + 22.4 0.000 promoter-TSS (NM_001349563) promoter-TSS (NM_001349563) 36 NM_001349559 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr12-754 chr12 57069520 57069730 + 22.4 0.000 intron (NM_001130963, intron 3 of 8) intron (NM_001130963, intron 3 of 8) 9166 NM_015257 23306 Hs.591040 NM_015257 ENSG00000166881 NEMP1 TMEM194|TMEM194A nuclear envelope integral membrane protein 1 protein-coding chr16-875 chr16 54286346 54286556 + 22.4 0.000 5' UTR (NM_024336, exon 1 of 4) 5' UTR (NM_024336, exon 1 of 4) 336 NM_024336 79191 Hs.499205 NM_024336 ENSG00000177508 IRX3 IRX-1|IRXB1 iroquois homeobox 3 protein-coding chr7-1055 chr7 137986470 137986680 + 22.4 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 15511 NM_194071 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr20-361 chr20 3159640 3159850 + 22.4 0.000 intron (NM_021826, intron 1 of 1) CpG 120 NM_014948 22888 Hs.654646 NM_014948 ENSG00000185019 UBOX5 RNF37|UBCE7IP5|UIP5|hUIP5 U-box domain containing 5 protein-coding chr12-1024 chr12 42539862 42540072 + 22.4 0.000 intron (NM_153026, intron 1 of 7) intron (NM_153026, intron 1 of 7) 49779 NM_153026 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr3-843 chr3 18111920 18112130 + 22.4 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 149473 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr12-371 chr12 95336548 95336758 + 22.4 0.000 Intergenic Intergenic 26730 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr5-862 chr5 149114714 149114924 + 22.4 0.000 Intergenic Intergenic -26628 NM_001345859 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr4-303 chr4 57065327 57065537 + 22.4 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -44330 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr2-471 chr2 128306278 128306488 + 22.4 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 12485 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr2-1529 chr2 127014838 127015048 + 22.4 0.000 Intergenic MIRb|SINE|MIR 67122 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr7-352 chr7 79453781 79453991 + 22.4 0.000 promoter-TSS (NM_012301) promoter-TSS (NM_012301) -74 NR_038344 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr17-586 chr17 57441089 57441299 + 22.4 0.000 intron (NM_001322250, intron 6 of 13) MamSINE1|SINE|tRNA-RTE 82403 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr10-454 chr10 29189303 29189513 + 22.4 0.000 Intergenic Intergenic -99662 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr22-465 chr22 24060475 24060685 + 22.4 0.000 intron (NM_012295, intron 12 of 36) intron (NM_012295, intron 12 of 36) 49210 NM_001199281 23523 Hs.517478 NM_012295 ENSG00000099991 CABIN1 CAIN|KB-318B8.7|PPP3IN calcineurin binding protein 1 protein-coding chr10-1056 chr10 96850930 96851140 + 22.4 0.000 intron (NM_001170766, intron 2 of 8) Tigger4|DNA|TcMar-Tigger 18090 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr3-668 chr3 25156767 25156977 + 22.4 0.000 intron (NM_001290216, intron 3 of 10) intron (NM_001290216, intron 3 of 10) -183930 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr22-543 chr22 26887472 26887682 + 22.4 0.000 Intergenic Intergenic -15715 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA chr3-1004 chr3 52428669 52428879 + 22.4 0.000 Intergenic Intergenic 16329 NM_020163 56920 Hs.59729 NM_020163 ENSG00000010319 SEMA3G sem2 semaphorin 3G protein-coding chr1-1828 chr1 246782265 246782475 + 22.4 0.000 Intergenic AluJo|SINE|Alu -7247 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr2-584 chr2 102064383 102064593 + 22.4 0.000 Intergenic Intergenic -5902 NM_001320978 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr16-625 chr16 29710405 29710615 + 22.4 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 31330 NR_134536 23475 Hs.513484 NM_014298 ENSG00000103485 QPRT HEL-S-90n|QPRTase quinolinate phosphoribosyltransferase protein-coding chr8-1136 chr8 130743671 130743881 + 22.4 0.000 Intergenic LTR89|LTR|ERVL? 297133 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr15-515 chr15 75532812 75533022 + 22.4 0.000 intron (NM_002833, intron 1 of 12) intron (NM_002833, intron 1 of 12) 46398 NM_002833 5780 Hs.445775 NM_002833 ENSG00000169410 PTPN9 MEG2|PTPMEG2 protein tyrosine phosphatase non-receptor type 9 protein-coding chr22-369 chr22 36383158 36383368 + 22.3 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 4804 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr11-637 chr11 61815361 61815571 + 22.3 0.000 promoter-TSS (NM_001281501) promoter-TSS (NM_001281501) -226 NR_031729 100302263 NR_031729 ENSG00000284416 MIR1908 MIRN1908|hsa-mir-1908|mir-1908 microRNA 1908 ncRNA chr4-215 chr4 73259163 73259373 + 22.3 0.000 promoter-TSS (NM_015574) promoter-TSS (NM_015574) -470 NM_032217 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chr12-785 chr12 47509545 47509755 + 22.3 0.000 Intergenic Intergenic 94642 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr10-360 chr10 103350911 103351121 + 22.3 0.000 exon (NM_032154, exon 1 of 7) exon (NM_032154, exon 1 of 7) 124 NM_032154 84108 Hs.335808 NM_032154 ENSG00000156374 PCGF6 MBLR|RNF134 polycomb group ring finger 6 protein-coding chr4-502 chr4 38948583 38948793 + 22.3 0.000 Intergenic Intergenic 80656 NR_030300 693159 NR_030300 ENSG00000207944 MIR574 MIR574-3p|MIRN574|hsa-mir-574|mir-574 microRNA 574 ncRNA chrX-343 chrX 10259634 10259844 + 22.3 0.000 Intergenic Intergenic 102764 NM_001830 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chr4-704 chr4 57233624 57233834 + 22.3 0.000 Intergenic L2c|LINE|L2 -123344 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr3-350 chr3 101849036 101849246 + 22.3 0.000 promoter-TSS (NM_031419) promoter-TSS (NM_031419) -373 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr7-557 chr7 41705256 41705466 + 22.3 0.000 intron (NR_027118, intron 1 of 3) intron (NR_027118, intron 1 of 3) -2271 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr14-554 chr14 102215086 102215296 + 22.3 0.000 TTS (NM_001353657) TTS (NM_001353657) 20235 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr21-78 chr21 42621406 42621616 + 22.3 0.000 Intergenic MER72|LTR|ERV1 -6416 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chr19-1190 chr19 45817168 45817378 + 22.3 0.000 intron (NM_004819, intron 23 of 26) intron (NM_004819, intron 23 of 26) -1965 NM_030785 81492 Hs.146544 NM_030785 ENSG00000104941 RSPH6A RSHL1|RSP4|RSP6|RSPH4B radial spoke head 6 homolog A protein-coding chr12-632 chr12 54222736 54222946 + 22.3 0.000 Intergenic L2b|LINE|L2 8635 NR_039851 100616400 NR_039851 ENSG00000283803 MIR3198-2 mir-3198-2 microRNA 3198-2 ncRNA chr22-565 chr22 40711644 40711854 + 22.3 0.000 Intergenic LTR81A|LTR|Gypsy 32571 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr21-241 chr21 28644809 28645019 + 22.3 0.000 Intergenic Intergenic 105596 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr2-1114 chr2 174633711 174633921 + 22.3 0.000 intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) 789 NM_003387 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr22-572 chr22 45709530 45709740 + 22.3 0.000 intron (NM_013236, intron 5 of 11) L2a|LINE|L2 37801 NM_013236 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr2-902 chr2 140990517 140990727 + 22.3 0.000 intron (NM_018557, intron 16 of 90) intron (NM_018557, intron 16 of 90) -403937 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chrX-118 chrX 72131977 72132187 + 22.3 0.000 promoter-TSS (NM_001024455) promoter-TSS (NM_001024455) -167 NM_001024455 340526 Hs.512180 NM_001024455 ENSG00000242732 RTL5 6430402L03Rik|MAR5|MART5|RGAG4|SIRH8 retrotransposon Gag like 5 protein-coding chr1-413 chr1 85464797 85465007 + 22.3 0.000 exon (NM_012137, exon 1 of 6) exon (NM_012137, exon 1 of 6) 257 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr6-343 chr6 75098828 75099038 + 22.3 0.000 intron (NM_080645, intron 43 of 50) intron (NM_080645, intron 43 of 50) 29849 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr4-60 chr4 566552 566762 + 22.3 0.000 Intergenic Intergenic 9643 NM_001362796 112441426 NM_001362796 TMEM271 - transmembrane protein 271 protein-coding chr18-53 chr18 21740720 21740930 + 22.3 0.000 promoter-TSS (NM_020774) promoter-TSS (NM_020774) -504 NM_020774 57534 Hs.140903 NM_020774 ENSG00000101752 MIB1 DIP-1|DIP1|LVNC7|MIB|ZZANK2|ZZZ6 mindbomb E3 ubiquitin protein ligase 1 protein-coding chr18-122 chr18 12391751 12391961 + 22.3 0.000 Intergenic Intergenic -14580 NM_006796 10939 Hs.726355 NM_006796 ENSG00000141385 AFG3L2 SCA28|SPAX5 AFG3 like matrix AAA peptidase subunit 2 protein-coding chr11-888 chr11 129639333 129639543 + 22.3 0.000 Intergenic Intergenic -22169 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr9-855 chr9 21576300 21576510 + 22.3 0.000 Intergenic Intergenic -16607 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr14-660 chr14 51905914 51906124 + 22.3 0.000 intron (NM_001243773, intron 2 of 3) THE1C|LTR|ERVL-MaLR 12552 NR_126331 102723604 Hs.667541 NR_126331 ENSG00000258928 LOC102723604 - uncharacterized LOC102723604 ncRNA chr16-1491 chr16 3825305 3825515 + 22.3 0.000 intron (NM_004380, intron 2 of 30) intron (NM_004380, intron 2 of 30) 54710 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr19-718 chr19 49527855 49528065 + 22.3 0.000 promoter-TSS (NM_020650) promoter-TSS (NM_020650) -43 NM_020650 57333 Hs.567550 NM_020650 ENSG00000142552 RCN3 RLP49 reticulocalbin 3 protein-coding chr11-688 chr11 68272061 68272271 + 22.3 0.000 promoter-TSS (NM_001300913) promoter-TSS (NM_001300913) -193 NM_001300913 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr8-228 chr8 109645274 109645484 + 22.3 0.000 promoter-TSS (NM_001099753) promoter-TSS (NM_001099753) 214 NM_001099751 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr19-889 chr19 8174667 8174877 + 22.3 0.000 Intergenic Intergenic -25180 NM_032447 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr2-989 chr2 150167795 150168005 + 22.3 0.000 Intergenic Intergenic 89107 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr19-966 chr19 48553845 48554055 + 22.3 0.000 intron (NM_177973, intron 1 of 6) intron (NM_177973, intron 1 of 6) 1778 NM_177973 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr19-632 chr19 1244475 1244685 + 22.3 0.000 3' UTR (NM_001687, exon 4 of 4) 3' UTR (NM_001687, exon 4 of 4) 2829 NM_001001975 513 Hs.418668 NM_001687 ENSG00000099624 ATP5F1D ATP5D|MC5DN5 ATP synthase F1 subunit delta protein-coding chr2-619 chr2 64767913 64768123 + 22.3 0.000 Intergenic CpG 95613 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr2-926 chr2 36372055 36372265 + 22.3 0.000 intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 16382 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr6-538 chr6 87929997 87930207 + 22.3 0.000 Intergenic Intergenic -117739 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr2-468 chr2 86719895 86720105 + 22.3 0.000 promoter-TSS (NM_022780) promoter-TSS (NM_022780) -291 NM_022780 64795 Hs.75277 NM_022780 ENSG00000153561 RMND5A CTLH|GID2|GID2A|RMD5|p44CTLH required for meiotic nuclear division 5 homolog A protein-coding chr7-571 chr7 24932965 24933175 + 22.3 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) -40449 NR_104111 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr17-806 chr17 83128565 83128775 + 22.3 0.000 Intergenic Intergenic 47524 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr2-696 chr2 217995878 217996088 + 22.3 0.000 Intergenic Intergenic 17276 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr6-1141 chr6 157443452 157443662 + 22.3 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 62367 NM_153746 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr3-879 chr3 188286266 188286476 + 22.3 0.000 intron (NM_005578, intron 2 of 10) MIRc|SINE|MIR 60966 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr6-418 chr6 157962689 157962899 + 22.3 0.000 Intergenic Intergenic -19069 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr16-428 chr16 149300 149510 + 22.3 0.000 Intergenic Intergenic -3239 NM_005332 3050 Hs.585357 NM_005332 ENSG00000130656 HBZ HBAZ|HBZ-T1|HBZ1 hemoglobin subunit zeta protein-coding chr13-169 chr13 20119198 20119408 + 22.3 0.000 Intergenic Intergenic 16602 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr20-301 chr20 37315255 37315465 + 22.3 0.000 intron (NM_022077, intron 3 of 3) intron (NM_022077, intron 3 of 3) 25705 NM_022077 63905 Hs.6126 NM_022077 ENSG00000101363 MANBAL - mannosidase beta like protein-coding chr11-696 chr11 36362011 36362221 + 22.3 0.000 intron (NM_001160167, intron 1 of 8) intron (NM_001160167, intron 1 of 8) -13869 NM_001160168 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr2-1167 chr2 205025164 205025374 + 22.3 0.000 intron (NM_205863, intron 3 of 21) intron (NM_205863, intron 3 of 21) 479794 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr1-885 chr1 26723649 26723859 + 22.3 0.000 intron (NM_139135, intron 1 of 19) intron (NM_139135, intron 1 of 19) 27739 NM_006015 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding chr2-1495 chr2 229175075 229175285 + 22.3 0.000 intron (NM_001100818, intron 1 of 2) MLT1G1|LTR|ERVL-MaLR 56912 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr21-107 chr21 36203601 36203811 + 22.3 0.000 intron (NM_005128, intron 4 of 36) intron (NM_005128, intron 4 of 36) 39165 NM_005128 9980 Hs.204575 NM_005128 ENSG00000142197 DOP1B 21orf5|C21orf5|DOPEY2 DOP1 leucine zipper like protein B protein-coding chr1-1602 chr1 64081024 64081234 + 22.3 0.000 intron (NM_005012, intron 4 of 8) intron (NM_005012, intron 4 of 8) 31076 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr12-568 chr12 45273864 45274074 + 22.3 0.000 intron (NM_001204803, intron 2 of 20) L2a|LINE|L2 -18721 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr20-458 chr20 49948865 49949075 + 22.3 0.000 intron (NM_018683, intron 4 of 5) intron (NM_018683, intron 4 of 5) 12573 NM_018683 55905 Hs.144949 NM_018683 ENSG00000124226 RNF114 PSORS12|ZNF313 ring finger protein 114 protein-coding chr1-1325 chr1 165854109 165854319 + 22.3 0.000 intron (NM_012474, intron 1 of 6) intron (NM_012474, intron 1 of 6) 26600 NM_001363568 7371 Hs.458360 NM_012474 ENSG00000143179 UCK2 TSA903|UK|UMPK uridine-cytidine kinase 2 protein-coding chrX-165 chrX 81121825 81122035 + 22.3 0.000 intron (NM_030763, intron 1 of 6) intron (NM_030763, intron 1 of 6) 79983 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr8-430 chr8 143382201 143382411 + 22.3 0.000 intron (NM_052924, intron 14 of 14) intron (NM_052924, intron 14 of 14) 13430 NM_052924 114822 Hs.521912 NM_052924 ENSG00000158106 RHPN1 ODF5|RHOPHILIN|RHPN rhophilin Rho GTPase binding protein 1 protein-coding chr13-260 chr13 66666094 66666304 + 22.3 0.000 intron (NM_020403, intron 2 of 3) intron (NM_020403, intron 2 of 3) -158970 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr22-284 chr22 21629904 21630114 + 22.3 0.000 promoter-TSS (NR_163923) promoter-TSS (NR_163923) 13 NR_163924 chr14-545 chr14 71090004 71090214 + 22.3 0.000 intron (NM_014982, intron 30 of 35) intron (NM_014982, intron 30 of 35) 182650 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr12-1226 chr12 10718631 10718841 + 22.3 0.000 intron (NM_001145426, intron 2 of 8) MIR3|SINE|MIR 4587 NM_003651 8531 Hs.221889 NM_003651 ENSG00000060138 YBX3 CSDA|CSDA1|DBPA|ZONAB Y-box binding protein 3 protein-coding chr3-482 chr3 51391012 51391222 + 22.3 0.000 promoter-TSS (NM_013286) promoter-TSS (NM_013286) -168 NM_013286 29890 Hs.118738 NM_013286 ENSG00000259956 RBM15B HUMAGCGB|HsOTT3|OTT3 RNA binding motif protein 15B protein-coding chr18-230 chr18 67360217 67360427 + 22.3 0.000 Intergenic Intergenic -156224 NR_033921 643542 Hs.652901 NR_033921 ENSG00000265533 LOC643542 - uncharacterized LOC643542 ncRNA chr18-172 chr18 59233007 59233217 + 22.3 0.000 Intergenic Intergenic 12954 NM_002091 2922 Hs.153444 NM_002091 ENSG00000134443 GRP BN|GRP-10|preproGRP|proGRP gastrin releasing peptide protein-coding chr20-220 chr20 4573931 4574141 + 22.3 0.000 Intergenic Intergenic -112420 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr10-512 chr10 79071272 79071482 + 22.3 0.000 intron (NM_020338, intron 1 of 24) intron (NM_020338, intron 1 of 24) 2411 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr17-652 chr17 77354969 77355179 + 22.3 0.000 intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) -18263 NM_001113493 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr17-317 chr17 29568467 29568677 + 22.3 0.000 promoter-TSS (NM_001346079) promoter-TSS (NM_001346079) -129 NM_001346081 90313 Hs.514050 NM_138349 ENSG00000167543 TP53I13 DSCP1 tumor protein p53 inducible protein 13 protein-coding chr9-717 chr9 2241773 2241983 + 22.3 0.000 Intergenic Intergenic 83422 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr4-395 chr4 169070548 169070758 + 22.3 0.000 Intergenic Intergenic -60398 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr7-1047 chr7 106330062 106330272 + 22.3 0.000 Intergenic Intergenic -45184 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr13-314 chr13 43730584 43730794 + 22.3 0.000 intron (NM_001347969, intron 1 of 16) L2c|LINE|L2 56283 NM_001347964 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr8-336 chr8 102375604 102375814 + 22.3 0.000 intron (NM_001282873, intron 1 of 58) intron (NM_001282873, intron 1 of 58) 36980 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr13-203 chr13 113862693 113862903 + 22.3 0.000 intron (NM_000820, intron 2 of 14) intron (NM_000820, intron 2 of 14) 1278 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr16-506 chr16 70380540 70380750 + 22.3 0.000 3' UTR (NM_006927, exon 7 of 7) 3' UTR (NM_006927, exon 7 of 7) 33742 NM_018332 55308 Hs.656037 NM_018332 ENSG00000168872 DDX19A DDX19-DDX19L|DDX19L DEAD-box helicase 19A protein-coding chr16-469 chr16 88405560 88405770 + 22.3 0.000 Intergenic Intergenic -21806 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr11-590 chr11 68373623 68373833 + 22.3 0.000 intron (NM_002335, intron 5 of 22) intron (NM_002335, intron 5 of 22) 61137 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr4-250 chr4 70839063 70839273 + 22.3 0.000 intron (NM_002092, intron 1 of 9) CpG 335 NM_001098477 2926 Hs.309763 NM_002092 ENSG00000132463 GRSF1 - G-rich RNA sequence binding factor 1 protein-coding chr17-660 chr17 12637083 12637293 + 22.3 0.000 TTS (NR_034144) TTS (NR_034144) -28702 NM_001146312 93649 Hs.462257 NM_153604 ENSG00000141052 MYOCD MYCD myocardin protein-coding chr13-187 chr13 50245112 50245322 + 22.3 0.000 intron (NR_109974, intron 2 of 6) MIR3|SINE|MIR 73199 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr8-476 chr8 57750882 57751092 + 22.3 0.000 TTS (NR_134276) TTS (NR_134276) 4838 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr9-506 chr9 127854232 127854442 + 22.3 0.000 exon (NM_000118, exon 1 of 14) exon (NM_000118, exon 1 of 14) 436 NM_000118 2022 Hs.76753 NM_000118 ENSG00000106991 ENG END|HHT1|ORW1 endoglin protein-coding chr6-368 chr6 16760038 16760248 + 22.3 0.000 promoter-TSS (NR_152113) promoter-TSS (NR_152113) 41 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr10-465 chr10 110225732 110225942 + 22.3 0.000 promoter-TSS (NM_005962) promoter-TSS (NM_005962) -159 NM_005962 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr9-470 chr9 97983123 97983333 + 22.3 0.000 promoter-TSS (NM_006401) promoter-TSS (NM_006401) -113 NM_006401 10541 Hs.730654 NM_006401 ENSG00000136938 ANP32B APRIL|PHAPI2|SSP29 acidic nuclear phosphoprotein 32 family member B protein-coding chr16-295 chr16 71895188 71895398 + 22.3 0.000 promoter-TSS (NM_001270977) promoter-TSS (NM_001270977) -200 NM_001270979 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr7-295 chr7 98106718 98106928 + 22.3 0.000 promoter-TSS (NM_014916) promoter-TSS (NM_014916) -39 NM_014916 22853 Hs.444179 NM_014916 ENSG00000164715 LMTK2 AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk|hBREK lemur tyrosine kinase 2 protein-coding chr16-366 chr16 67968595 67968805 + 22.3 0.000 promoter-TSS (NM_001145962) promoter-TSS (NM_001145962) -6 NM_001145962 6560 Hs.10094 NM_005072 ENSG00000124067 SLC12A4 CTC-479C5.17|KCC1|hKCC1 solute carrier family 12 member 4 protein-coding chr22-429 chr22 39319660 39319870 + 22.3 0.000 promoter-TSS (NR_002439) promoter-TSS (NR_002439) -142 NM_001033853 6122 Hs.119598 NM_000967 ENSG00000100316 RPL3 ASC-1|L3|TARBP-B ribosomal protein L3 protein-coding chr1-459 chr1 21937479 21937689 + 22.3 0.000 promoter-TSS (NM_001291860) promoter-TSS (NM_001291860) -274 NM_005529 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr12-564 chr12 112839367 112839577 + 22.3 0.000 intron (NR_145127, intron 4 of 22) MLT1H|LTR|ERVL-MaLR 47724 NR_145127 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr17-756 chr17 75205457 75205667 + 22.3 0.000 promoter-TSS (NM_024844) promoter-TSS (NM_024844) 112 NM_001303276 79902 Hs.362817 NM_024844 ENSG00000125450 NUP85 FROUNT|NPHS17|Nup75 nucleoporin 85 protein-coding chr4-530 chr4 132180169 132180379 + 22.3 0.000 Intergenic Intergenic -410815 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr3-422 chr3 194633520 194633730 + 22.3 0.000 promoter-TSS (NM_001166306) promoter-TSS (NM_001166306) -206 NM_138399 93109 Hs.478729 NM_138399 ENSG00000145014 TMEM44 - transmembrane protein 44 protein-coding chr19-353 chr19 639639 639849 + 22.3 0.000 promoter-TSS (NM_020637) promoter-TSS (NM_020637) -151 NM_001300812 27006 Hs.248087 NM_020637 ENSG00000070388 FGF22 - fibroblast growth factor 22 protein-coding chr1-1637 chr1 178908337 178908547 + 22.3 0.000 intron (NM_152663, intron 19 of 19) L1PA16|LINE|L1 -37365 NM_004673 9068 Hs.591474 NM_004673 ENSG00000116194 ANGPTL1 ANG3|ANGPT3|ARP1|AngY|UNQ162|dJ595C2.2 angiopoietin like 1 protein-coding chr2-915 chr2 202721743 202721953 + 22.3 0.000 intron (NM_173511, intron 2 of 7) AluJb|SINE|Alu 86879 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr21-163 chr21 41142393 41142603 + 22.3 0.000 non-coding (NR_024100, exon 2 of 2) non-coding (NR_024100, exon 2 of 2) 5566 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr15-240 chr15 44663650 44663860 + 22.3 0.000 promoter-TSS (NM_001160227) promoter-TSS (NM_001160227) -93 NM_025137 80208 Hs.656271 NM_025137 ENSG00000104133 SPG11 ALS5|CMT2X|KIAA1840 SPG11 vesicle trafficking associated, spatacsin protein-coding chr5-426 chr5 132258461 132258671 + 22.3 0.000 intron (NM_001131027, intron 1 of 5) intron (NM_001131027, intron 1 of 5) 870 NM_003687 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr8-372 chr8 28776146 28776356 + 22.3 0.000 intron (NR_026826, intron 11 of 14) intron (NR_026826, intron 11 of 14) 74750 NR_073469 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr22-375 chr22 39292723 39292933 + 22.3 0.000 Intergenic Intergenic 21083 NR_000028 116938 NR_000028 ENSG00000209480 SNORD83B RNU83B|U83B small nucleolar RNA, C/D box 83B snoRNA chr7-699 chr7 126701143 126701353 + 22.3 0.000 3' UTR (NM_001371088, exon 8 of 8) 3' UTR (NM_001371088, exon 8 of 8) 356936 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr11-1189 chr11 82858803 82859013 + 22.2 0.000 intron (NM_001319214, intron 1 of 7) intron (NM_001319214, intron 1 of 7) 41522 NM_005040 5547 Hs.523936 NM_005040 ENSG00000137509 PRCP HUMPCP|PCP prolylcarboxypeptidase protein-coding chr5-741 chr5 173615952 173616162 + 22.2 0.000 intron (NM_138369, intron 1 of 3) intron (NM_138369, intron 1 of 3) 593 NM_138369 91272 Hs.425091 NM_138369 ENSG00000145919 BOD1 FAM44B biorientation of chromosomes in cell division 1 protein-coding chr17-664 chr17 62171317 62171527 + 22.2 0.000 Intergenic AluSx|SINE|Alu 104233 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr3-1046 chr3 187841545 187841755 + 22.2 0.000 Intergenic Intergenic -96182 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr4-524 chr4 26584047 26584257 + 22.2 0.000 promoter-TSS (NM_018317) promoter-TSS (NM_018317) 68 NM_018317 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr13-239 chr13 49082704 49082914 + 22.2 0.000 intron (NM_001079673, intron 3 of 25) intron (NM_001079673, intron 3 of 25) -27508 NM_014923 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr8-447 chr8 22695140 22695350 + 22.2 0.000 Intergenic CpG-27074 -1765 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr1-1641 chr1 193115705 193115915 + 22.2 0.000 Intergenic L1MCa|LINE|L1 -6148 NM_024529 79577 Hs.378996 NM_024529 ENSG00000134371 CDC73 C1orf28|FIHP|HPTJT|HRPT1|HRPT2|HYX cell division cycle 73 protein-coding chr13-132 chr13 60163974 60164184 + 22.2 0.000 promoter-TSS (NM_001042517) promoter-TSS (NM_001042517) -94 NM_001258369 81624 Hs.283127 NM_030932 ENSG00000139734 DIAPH3 AN|AUNA1|DIA2|DRF3|NSDAN|diap3|mDia2 diaphanous related formin 3 protein-coding chr3-455 chr3 39406557 39406767 + 22.2 0.000 promoter-TSS (NM_001304288) promoter-TSS (NM_001304288) -58 NM_002295 3921 Hs.449909 NM_002295 ENSG00000168028 RPSA 37LRP|67LR|ICAS|LAMBR|LAMR1|LBP|LBP/p40|LRP|LRP/LR|NEM/1CHD4|SA|lamR|p40 ribosomal protein SA protein-coding chr3-1594 chr3 176373369 176373579 + 22.2 0.000 Intergenic L1MA5A|LINE|L1 128923 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA chr8-655 chr8 129459839 129460049 + 22.2 0.000 intron (NR_130920, intron 1 of 3) intron (NR_130920, intron 1 of 3) 24198 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA chr13-331 chr13 95426779 95426989 + 22.2 0.000 Intergenic AluJr|SINE|Alu -6715 NM_001160100 9071 Hs.534377 NM_006984 ENSG00000134873 CLDN10 CPETRL3|HELIX|OSP-L|OSPL claudin 10 protein-coding chr13-442 chr13 37187265 37187475 + 22.2 0.000 Intergenic Intergenic -81706 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr2-1187 chr2 96342266 96342476 + 22.2 0.000 intron (NM_001281712, intron 2 of 16) MIR|SINE|MIR 6605 NM_015341 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr8-440 chr8 121625932 121626142 + 22.2 0.000 intron (NM_005328, intron 2 of 3) intron (NM_005328, intron 2 of 3) -13309 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr1-1170 chr1 113979234 113979444 + 22.2 0.000 promoter-TSS (NM_001286353) promoter-TSS (NM_001286353) -52 NM_001286353 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr6-596 chr6 38346852 38347062 + 22.2 0.000 intron (NM_052893, intron 7 of 11) intron (NM_052893, intron 7 of 11) -134639 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr19-796 chr19 40279188 40279398 + 22.2 0.000 intron (NM_001626, intron 1 of 13) intron (NM_001626, intron 1 of 13) 3348 NR_030371 693226 NR_030371 ENSG00000207631 MIR641 MIRN641|hsa-mir-641|mir-641 microRNA 641 ncRNA chr12-1033 chr12 56358908 56359118 + 22.2 0.000 intron (NM_198332, intron 1 of 23) Tigger19a|DNA|TcMar-Tigger 1094 NM_005419 6773 Hs.530595 NM_005419 ENSG00000170581 STAT2 IMD44|ISGF-3|P113|STAT113 signal transducer and activator of transcription 2 protein-coding chr14-488 chr14 74697603 74697813 + 22.2 0.000 intron (NM_001039479, intron 1 of 19) CR1-L3A_Croc|LINE|CR1 15372 NM_001039479 9870 Hs.497417 NM_014821 ENSG00000119682 AREL1 FIEL1|KIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding chr3-818 chr3 111594288 111594498 + 22.2 0.000 5' UTR (NM_024508, exon 2 of 2) 5' UTR (NM_024508, exon 2 of 2) 953 NM_024508 79413 Hs.136912 NM_024508 ENSG00000177494 ZBED2 - zinc finger BED-type containing 2 protein-coding chr15-649 chr15 48459491 48459701 + 22.2 0.000 intron (NM_000138, intron 43 of 65) intron (NM_000138, intron 43 of 65) 127399 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr15-531 chr15 68586242 68586452 + 22.2 0.000 intron (NM_006091, intron 1 of 11) L2c|LINE|L2 7354 NM_006091 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr4-339 chr4 168318504 168318714 + 22.2 0.000 intron (NM_017631, intron 1 of 37) CpG 143 NM_017631 55601 Hs.591710 NM_017631 ENSG00000137628 DDX60 - DExD/H-box helicase 60 protein-coding chr19-975 chr19 778958 779168 + 22.2 0.000 Intergenic Intergenic -18389 NM_031990 5725 Hs.172550 NM_002819 ENSG00000011304 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding chr18-273 chr18 68677110 68677320 + 22.2 0.000 intron (NM_019022, intron 15 of 15) intron (NM_019022, intron 15 of 15) 37893 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr8-880 chr8 20382383 20382593 + 22.2 0.000 Intergenic Intergenic -78525 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr10-979 chr10 118423870 118424080 + 22.2 0.000 Intergenic Intergenic 66867 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr12-313 chr12 3107236 3107446 + 22.2 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 29962 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr12-891 chr12 103560536 103560746 + 22.2 0.000 TTS (NR_110103) TTS (NR_110103) 12847 NR_110103 101929084 Hs.440981 NR_110103 ENSG00000257762 LINC02401 - long intergenic non-protein coding RNA 2401 ncRNA chr12-1284 chr12 96274466 96274676 + 22.2 0.000 Intergenic L1MB4|LINE|L1 19073 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr7-698 chr7 90403345 90403555 + 22.2 0.000 promoter-TSS (NM_001185072) promoter-TSS (NM_001185072) -11 NM_001185072 9069 Hs.731917 NM_012129 ENSG00000157224 CLDN12 - claudin 12 protein-coding chr13-206 chr13 45340545 45340755 + 22.2 0.000 promoter-TSS (NR_024458) promoter-TSS (NR_024458) 533 NM_001286273 7178 Hs.374596 NM_003295 ENSG00000133112 TPT1 HRF|TCTP|p02|p23 tumor protein, translationally-controlled 1 protein-coding chr5-980 chr5 10601567 10601777 + 22.2 0.000 intron (NM_001164440, intron 1 of 3) intron (NM_001164440, intron 1 of 3) 37602 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr1-1698 chr1 240399432 240399642 + 22.2 0.000 intron (NM_020066, intron 15 of 17) L1M4b|LINE|L1 212618 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr15-314 chr15 49170068 49170278 + 22.2 0.000 promoter-TSS (NR_147895) promoter-TSS (NR_147895) -74 NM_001289030 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr16-481 chr16 88510503 88510713 + 22.2 0.000 intron (NM_153813, intron 3 of 9) intron (NM_153813, intron 3 of 9) 20445 NR_148997 100128882 Hs.722546 NR_148997 ENSG00000261744 LOC100128882 - uncharacterized LOC100128882 ncRNA chr18-412 chr18 45051025 45051235 + 22.2 0.000 intron (NM_015559, intron 5 of 5) intron (NM_015559, intron 5 of 5) -80964 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr3-497 chr3 78258955 78259165 + 22.2 0.000 Intergenic Intergenic -210097 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chrX-114 chrX 53082090 53082300 + 22.2 0.000 promoter-TSS (NM_022117) promoter-TSS (NM_022117) -172 NM_022117 64061 Hs.136164 NM_022117 ENSG00000184205 TSPYL2 CDA1|CINAP|CTCL|DENTT|HRIHFB2216|NP79|SE204|TSPX TSPY like 2 protein-coding chr2-2520 chr2 178279219 178279429 + 22.2 0.000 intron (NM_001201480, intron 1 of 25) intron (NM_001201480, intron 1 of 25) -40918 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr17-559 chr17 17891120 17891330 + 22.2 0.000 intron (NM_001033551, intron 3 of 13) intron (NM_001033551, intron 3 of 13) -54214 NM_004176 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr3-592 chr3 78101416 78101626 + 22.2 0.000 Intergenic MamRTE1|LINE|RTE-BovB -52558 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr15-635 chr15 80984850 80985060 + 22.2 0.000 intron (NR_126327, intron 1 of 4) MIR3|SINE|MIR 4864 NR_126327 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr7-579 chr7 99762986 99763196 + 22.2 0.000 intron (NM_017460, intron 10 of 12) intron (NM_017460, intron 10 of 12) 21093 NM_001202855 1576 Hs.728751 NM_017460 ENSG00000160868 CYP3A4 CP33|CP34|CYP3A|CYP3A3|CYPIIIA3|CYPIIIA4|HLP|NF-25|P450C3|P450PCN1 cytochrome P450 family 3 subfamily A member 4 protein-coding chr10-666 chr10 68331647 68331857 + 22.2 0.000 promoter-TSS (NM_012207) promoter-TSS (NM_012207) 59 NM_001322445 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding chr10-367 chr10 80177955 80178165 + 22.2 0.000 intron (NM_001278409, intron 1 of 16) L3|LINE|CR1 26431 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr3-1336 chr3 111803226 111803436 + 22.2 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) -55849 NM_145753 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr1-1276 chr1 89198657 89198867 + 22.2 0.000 intron (NM_052941, intron 1 of 10) intron (NM_052941, intron 1 of 10) 180 NM_052941 115361 Hs.409925 NM_052941 ENSG00000162654 GBP4 Mpa2 guanylate binding protein 4 protein-coding chr7-420 chr7 46145440 46145650 + 22.2 0.000 Intergenic Intergenic -224273 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr11-742 chr11 63024042 63024252 + 22.2 0.000 Intergenic Intergenic -8302 NM_001184733 9376 Hs.266223 NM_004254 ENSG00000149452 SLC22A8 OAT3 solute carrier family 22 member 8 protein-coding chr1-1523 chr1 66168404 66168614 + 22.2 0.000 intron (NM_001037340, intron 1 of 14) L2a|LINE|L2 -117791 NR_123718 101927139 Hs.127908 NR_123718 ENSG00000227466 LOC101927139 - uncharacterized LOC101927139 ncRNA chr3-702 chr3 64225259 64225469 + 22.2 0.000 5' UTR (NM_198859, exon 1 of 8) 5' UTR (NM_198859, exon 1 of 8) 102 NM_198859 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr6-622 chr6 34284770 34284980 + 22.2 0.000 3' UTR (NM_006703, exon 5 of 5) 3' UTR (NM_006703, exon 5 of 5) -35767 NR_155741 221491 Hs.381300 NM_178508 ENSG00000186577 SMIM29 C6orf1|LBH small integral membrane protein 29 protein-coding chr6-815 chr6 83231268 83231478 + 22.2 0.000 intron (NM_002395, intron 9 of 13) intron (NM_002395, intron 9 of 13) -37473 NM_001199917 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr11-901 chr11 46272969 46273179 + 22.2 0.000 Intergenic Intergenic -4588 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr6-309 chr6 169452095 169452305 + 22.2 0.000 Intergenic Intergenic -198086 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr3-747 chr3 175777683 175777893 + 22.2 0.000 intron (NM_207015, intron 13 of 13) intron (NM_207015, intron 13 of 13) -1455 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr5-536 chr5 74383222 74383432 + 22.2 0.000 intron (NR_126354, intron 2 of 2) intron (NR_126354, intron 2 of 2) 60841 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chr17-852 chr17 39156605 39156815 + 22.2 0.000 TTS (NM_001143968) TTS (NM_001143968) -5073 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr11-519 chr11 65989084 65989294 + 22.2 0.000 Intergenic Intergenic -12890 NM_001143985 8815 Hs.433759 NM_003860 ENSG00000175334 BANF1 BAF|BCRP1|D14S1460|NGPS barrier to autointegration factor 1 protein-coding chr13-242 chr13 78659009 78659219 + 22.2 0.000 promoter-TSS (NM_024546) promoter-TSS (NM_024546) 41 NM_024546 79596 Hs.567576 NM_024546 ENSG00000152193 OBI1 C13orf7|RNF219 ORC ubiquitin ligase 1 protein-coding chr22-190 chr22 37807815 37808025 + 22.2 0.000 promoter-TSS (NM_001171690) promoter-TSS (NM_001171690) 15 NM_001171690 23464 Hs.54609 NM_014291 ENSG00000100116 GCAT KBL glycine C-acetyltransferase protein-coding chr11-569 chr11 64285433 64285643 + 22.2 0.000 promoter-TSS (NM_001170880) promoter-TSS (NM_001170880) -310 NM_001170880 56834 Hs.523763 NM_020155 ENSG00000173264 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding chr9-1221 chr9 128948436 128948646 + 22.2 0.000 promoter-TSS (NM_014908) promoter-TSS (NM_014908) -808 NM_014908 22845 Hs.531563 NM_014908 ENSG00000175283 DOLK CDG1M|DK|DK1|SEC59|TMEM15 dolichol kinase protein-coding chr1-1427 chr1 40692076 40692286 + 22.2 0.000 promoter-TSS (NR_024567) promoter-TSS (NR_024567) 80 NR_024567 100130557 Hs.233458 NR_024567 NFYC-AS1 0808y08y NFYC antisense RNA 1 ncRNA chr9-1013 chr9 100601229 100601439 + 22.2 0.000 Intergenic LTR41|LTR|ERVL 23255 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr11-729 chr11 72431045 72431255 + 22.2 0.000 intron (NM_030813, intron 1 of 16) intron (NM_030813, intron 1 of 16) 3381 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr10-770 chr10 609156 609366 + 22.2 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -19303 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr2-1042 chr2 74991955 74992165 + 22.2 0.000 Intergenic MER66D|LTR|ERV1 33417 NM_019896 56655 Hs.469060 NM_019896 ENSG00000115350 POLE4 YHHQ1|p12 DNA polymerase epsilon 4, accessory subunit protein-coding chr9-733 chr9 128947155 128947365 + 22.2 0.000 promoter-TSS (NM_015354) promoter-TSS (NM_015354) -439 NM_015354 23511 Hs.308340 NM_015354 ENSG00000095319 NUP188 KIAA0169|hNup188 nucleoporin 188 protein-coding chr12-723 chr12 14952459 14952669 + 22.2 0.000 intron (NM_001175, intron 1 of 5) intron (NM_001175, intron 1 of 5) -1413 NM_001321422 397 Hs.504877 NM_001175 ENSG00000111348 ARHGDIB D4|GDIA2|GDID4|LYGDI|Ly-GDI|RAP1GN1|RhoGDI2 Rho GDP dissociation inhibitor beta protein-coding chr9-329 chr9 34665365 34665575 + 22.2 0.000 intron (NM_001320037, intron 2 of 3) CpG 575 NR_135148 730098 Hs.459590 NM_001320037 ENSG00000187186 LOC730098 - uncharacterized LOC730098 protein-coding chr1-2002 chr1 39395584 39395794 + 22.2 0.000 intron (NM_012090, intron 52 of 92) intron (NM_012090, intron 52 of 92) -13384 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr22-170 chr22 50327058 50327268 + 22.2 0.000 promoter-TSS (NM_001001794) promoter-TSS (NM_001001794) -151 NM_001001794 414918 Hs.530380 NM_001001794 ENSG00000205593 DENND6B AFI1B|FAM116B DENN domain containing 6B protein-coding chr4-684 chr4 156686319 156686529 + 22.2 0.000 Intergenic Intergenic 285375 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr10-843 chr10 921803 922013 + 22.2 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 9797 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr21-96 chr21 45140391 45140601 + 22.2 0.000 intron (NR_027673, intron 3 of 12) intron (NR_027673, intron 3 of 12) -12034 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr1-1313 chr1 93804480 93804690 + 22.2 0.000 intron (NM_001261408, intron 2 of 13) MER44B|DNA|TcMar-Tigger -29202 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr7-449 chr7 30594805 30595015 + 22.2 0.000 promoter-TSS (NM_002047) promoter-TSS (NM_002047) 32 NM_002047 2617 Hs.404321 NM_002047 ENSG00000106105 GARS CMT2D|DSMAV|GlyRS|HMN5|SMAD1 glycyl-tRNA synthetase protein-coding chr22-439 chr22 29268611 29268821 + 22.2 0.000 promoter-TSS (NM_012265) promoter-TSS (NM_012265) 448 NM_001163285 2130 Hs.374477 NM_005243 ENSG00000182944 EWSR1 EWS|EWS-FLI1|bK984G1.4 EWS RNA binding protein 1 protein-coding chr1-2112 chr1 170790530 170790740 + 22.2 0.000 Intergenic Intergenic 126504 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr8-235 chr8 116874844 116875054 + 22.2 0.000 promoter-TSS (NM_006265) promoter-TSS (NM_006265) -83 NM_006265 5885 Hs.81848 NM_006265 ENSG00000164754 RAD21 CDLS4|HR21|HRAD21|MCD1|MGS|NXP1|SCC1|hHR21 RAD21 cohesin complex component protein-coding chr16-480 chr16 84116892 84117102 + 22.2 0.000 promoter-TSS (NM_003791) promoter-TSS (NM_003791) -55 NM_003791 8720 Hs.75890 NM_003791 ENSG00000140943 MBTPS1 PCSK8|S1P|SEDKF|SKI-1 membrane bound transcription factor peptidase, site 1 protein-coding chr8-487 chr8 144522396 144522606 + 22.2 0.000 exon (NM_001024678, exon 5 of 5) exon (NM_001024678, exon 5 of 5) 4509 NM_001272036 9684 Hs.459391 NM_014665 ENSG00000160959 LRRC14 LRRC14A leucine rich repeat containing 14 protein-coding chr16-646 chr16 67160879 67161089 + 22.2 0.000 intron (NM_018378, intron 1 of 2) intron (NM_018378, intron 1 of 2) 1027 NM_018378 55336 Hs.710714 NM_018378 ENSG00000135722 FBXL8 FBL8 F-box and leucine rich repeat protein 8 protein-coding chr11-492 chr11 22625629 22625839 + 22.2 0.000 exon (NM_022725, exon 1 of 1) exon (NM_022725, exon 1 of 1) 107 NM_022725 2188 Hs.632151 NM_022725 ENSG00000183161 FANCF FAF FA complementation group F protein-coding chr2-1539 chr2 177543242 177543452 + 22.2 0.000 3' UTR (NM_003659, exon 20 of 20) 3' UTR (NM_003659, exon 20 of 20) 9449 NM_152517 150737 Hs.447659 NM_152517 ENSG00000196659 TTC30B IFT70|IFT70B|fleer tetratricopeptide repeat domain 30B protein-coding chr11-666 chr11 45843274 45843484 + 22.2 0.000 Intergenic Intergenic -3739 NM_001127457 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr1-1772 chr1 19369753 19369963 + 22.2 0.000 intron (NM_001206540, intron 4 of 9) intron (NM_001206540, intron 4 of 9) 57532 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr2-1184 chr2 55165713 55165923 + 22.2 0.000 Intergenic LTR16A|LTR|ERVL -27987 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr8-618 chr8 123154722 123154932 + 22.2 0.000 intron (NM_001363151, intron 19 of 19) LTR41B|LTR|ERVL -24220 NM_207006 84985 Hs.379821 NM_032899 ENSG00000147689 FAM83A BJ-TSA-9 family with sequence similarity 83 member A protein-coding chr12-904 chr12 118402319 118402529 + 22.2 0.000 intron (NM_022491, intron 9 of 11) intron (NM_022491, intron 9 of 11) 25869 NM_022491 64426 Hs.416630 NM_022491 ENSG00000111707 SUDS3 SAP45|SDS3 SDS3 homolog, SIN3A corepressor complex component protein-coding chr12-763 chr12 105741930 105742140 + 22.2 0.000 non-coding (NR_110108, exon 3 of 3) non-coding (NR_110108, exon 3 of 3) 35261 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr9-383 chr9 131531112 131531322 + 22.2 0.000 promoter-TSS (NM_031432) promoter-TSS (NM_031432) 46 NM_031432 83549 Hs.9597 NM_031432 ENSG00000130717 UCK1 URK1 uridine-cytidine kinase 1 protein-coding chr14-230 chr14 104820847 104821057 + 22.2 0.000 promoter-TSS (NR_024396) promoter-TSS (NR_024396) -249 NR_024396 196872 Hs.352220 NR_024396 ENSG00000258701 LINC00638 - long intergenic non-protein coding RNA 638 ncRNA chr13-718 chr13 74211086 74211296 + 22.2 0.000 Intergenic Intergenic -20253 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr10-736 chr10 63629452 63629662 + 22.2 0.000 Intergenic Intergenic -107667 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr3-642 chr3 129249557 129249767 + 22.2 0.000 promoter-TSS (NM_016128) promoter-TSS (NM_016128) 56 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding chr1-1842 chr1 18907229 18907439 + 22.2 0.000 3' UTR (NM_001136265, exon 9 of 9) 3' UTR (NM_001136265, exon 9 of 9) -4535 NM_001319218 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chr11-826 chr11 67354533 67354743 + 22.2 0.000 intron (NR_024469, intron 2 of 3) intron (NR_024469, intron 2 of 3) -1042 NR_046412 57804 Hs.523829 NM_021173 ENSG00000175482 POLD4 POLDS|p12 DNA polymerase delta 4, accessory subunit protein-coding chr7-953 chr7 129295114 129295324 + 22.2 0.000 intron (NM_001130720, intron 1 of 16) intron (NM_001130720, intron 1 of 16) 70189 NM_015328 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr8-152 chr8 143278737 143278947 + 22.2 0.000 Intergenic CpG 2858 NR_120683 100507316 Hs.446671 NR_120682 ENSG00000253716 MINCR LINC01604 MYC-induced long non-coding RNA ncRNA chr17-1190 chr17 66904883 66905093 + 22.2 0.000 Intergenic Intergenic -59719 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr1-671 chr1 25819883 25820093 + 22.2 0.000 promoter-TSS (NM_001099627) promoter-TSS (NM_001099627) 34 NM_001099625 56181 Hs.149305 NM_019557 ENSG00000117640 MTFR1L FAM54B|HYST1888|MST116|MSTP116 mitochondrial fission regulator 1 like protein-coding chr16-771 chr16 86363109 86363319 + 22.2 0.000 Intergenic Intergenic -17535 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr4-841 chr4 16253664 16253874 + 22.2 0.000 intron (NR_027697, intron 2 of 2) intron (NR_027697, intron 2 of 2) 27106 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr19-570 chr19 55174047 55174257 + 22.2 0.000 intron (NM_001297774, intron 6 of 6) intron (NM_001297774, intron 6 of 6) 5196 NM_001297774 6861 Hs.631566 NM_003180 ENSG00000129990 SYT5 - synaptotagmin 5 protein-coding chr7-938 chr7 46191776 46191986 + 22.2 0.000 Intergenic Intergenic -270609 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr12-1437 chr12 82740352 82740562 + 22.2 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 53302 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr10-619 chr10 119338022 119338232 + 22.2 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -39845 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr7-1212 chr7 82428379 82428589 + 22.2 0.000 intron (NM_000722, intron 1 of 38) intron (NM_000722, intron 1 of 38) 15293 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr6-300 chr6 41698536 41698746 + 22.2 0.000 intron (NM_001167827, intron 1 of 8) intron (NM_001167827, intron 1 of 8) 34969 NR_162107 113218489 NR_162107 MIR10398 - microRNA 10398 ncRNA chr17-883 chr17 29931393 29931603 + 22.2 0.000 intron (NM_001145053, intron 1 of 14) intron (NM_001145053, intron 1 of 14) -1270 NM_001282129 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr8-290 chr8 125556388 125556598 + 22.2 0.000 Intergenic Intergenic 124284 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr10-963 chr10 68250819 68251029 + 22.2 0.000 Intergenic Intergenic -18811 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding chr17-774 chr17 44186578 44186788 + 22.2 0.000 promoter-TSS (NR_148386) promoter-TSS (NR_148386) 34 NR_049730 339201 Hs.656564 NM_178542 ENSG00000267080 ASB16-AS1 C17orf65 ASB16 antisense RNA 1 ncRNA chr1-1865 chr1 78229479 78229689 + 22.2 0.000 promoter-TSS (NR_027310) promoter-TSS (NR_027310) -15 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr8-709 chr8 135458606 135458816 + 22.2 0.000 intron (NM_006558, intron 1 of 8) intron (NM_006558, intron 1 of 8) 1255 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr2-1149 chr2 107334408 107334618 + 22.2 0.000 intron (NR_049853, intron 1 of 3) L2c|LINE|L2 15012 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr10-970 chr10 89860653 89860863 + 22.2 0.000 intron (NR_149080, intron 1 of 1) L1ME2|LINE|L1 6852 NR_149080 105378425 Hs.559891 NR_149079 ENSG00000280560 LINC01374 TCONS_00018278 long intergenic non-protein coding RNA 1374 ncRNA chr7-719 chr7 133436114 133436324 + 22.2 0.000 intron (NM_021807, intron 7 of 17) intron (NM_021807, intron 7 of 17) 145338 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chr4-986 chr4 124953077 124953287 + 22.2 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -240450 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr7-742 chr7 77010143 77010353 + 22.0 0.000 intron (NR_023383, intron 6 of 10) intron (NR_023383, intron 6 of 10) 20322 NM_001351349 100996746 Hs.645327 NM_001351349 ENSG00000286228 SPDYE11 - speedy/RINGO cell cycle regulator family member E11 protein-coding chr20-217 chr20 62382797 62383007 + 22.0 0.000 Intergenic Intergenic -4201 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr8-405 chr8 22918369 22918579 + 22.0 0.000 intron (NM_001363233, intron 3 of 6) intron (NM_001363233, intron 3 of 6) 9440 NM_144962 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr16-291 chr16 2777300 2777510 + 22.0 0.000 promoter-TSS (NM_007108) promoter-TSS (NM_007108) -125 NM_007108 6923 Hs.172772 NM_007108 ENSG00000103363 ELOB SIII|TCEB2 elongin B protein-coding chr19-598 chr19 52028431 52028641 + 22.0 0.000 promoter-TSS (NM_025040) promoter-TSS (NM_025040) -157 NM_025040 80110 Hs.292336 NM_025040 ENSG00000142556 ZNF614 - zinc finger protein 614 protein-coding chr9-595 chr9 93207586 93207796 + 22.0 0.000 intron (NM_006648, intron 1 of 28) intron (NM_006648, intron 1 of 28) 22761 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr11-320 chr11 65873509 65873719 + 22.0 0.000 promoter-TSS (NR_037718) promoter-TSS (NR_037718) -814 NR_037718 30008 Hs.731454 NM_016938 ENSG00000172638 EFEMP2 ARCL1B|FBLN4|MBP1|UPH1 EGF containing fibulin extracellular matrix protein 2 protein-coding chr11-1319 chr11 74611547 74611757 + 22.0 0.000 intron (NM_001363597, intron 4 of 11) intron (NM_001363597, intron 4 of 11) 19070 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr11-424 chr11 1308999 1309209 + 22.0 0.000 promoter-TSS (NR_029409) promoter-TSS (NR_029409) 528 NM_001318515 54472 Hs.368527 NM_019009 ENSG00000078902 TOLLIP IL-1RAcPIP toll interacting protein protein-coding chr1-1399 chr1 208219847 208220057 + 22.0 0.000 intron (NM_025179, intron 1 of 31) intron (NM_025179, intron 1 of 31) 24432 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr2-1420 chr2 164542698 164542908 + 22.0 0.000 intron (NM_004490, intron 3 of 13) L1PA16|LINE|L1 25692 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr10-1178 chr10 66827405 66827615 + 22.0 0.000 intron (NM_001127384, intron 7 of 17) MIRc|SINE|MIR -98526 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr2-775 chr2 64288478 64288688 + 22.0 0.000 Intergenic Intergenic -52176 NR_039632 100616265 NR_039632 ENSG00000283222 MIR4433A MIR4433|hsa-mir-4433a microRNA 4433a ncRNA chr22-583 chr22 38327839 38328049 + 22.0 0.000 intron (NM_001289912, intron 5 of 14) intron (NM_001289912, intron 5 of 14) -9860 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr2-1308 chr2 28346647 28346857 + 22.0 0.000 Intergenic Intergenic -36293 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr14-275 chr14 75147500 75147710 + 22.0 0.000 intron (NM_006827, intron 3 of 4) intron (NM_006827, intron 3 of 4) -20557 NM_001329238 91754 Hs.7200 NM_033116 ENSG00000119638 NEK9 APUG|LCCS10|NC|NERCC|NERCC1 NIMA related kinase 9 protein-coding chr4-390 chr4 133149158 133149368 + 22.0 0.000 promoter-TSS (NM_020815) promoter-TSS (NM_020815) -31 NM_032961 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr7-1112 chr7 106718448 106718658 + 22.0 0.000 Intergenic Intergenic -57395 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr8-792 chr8 100512328 100512538 + 22.0 0.000 intron (NM_001270379, intron 5 of 5) L3|LINE|CR1 47326 NM_001270378 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr3-439 chr3 12949369 12949579 + 22.0 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) 18256 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr8-416 chr8 133294290 133294500 + 22.0 0.000 intron (NM_006096, intron 1 of 15) intron (NM_006096, intron 1 of 15) 2857 NM_001258432 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr20-297 chr20 4152098 4152308 + 22.0 0.000 intron (NM_001270691, intron 1 of 7) intron (NM_001270691, intron 1 of 7) 3375 NM_175840 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr14-525 chr14 73466048 73466258 + 22.0 0.000 Intergenic Intergenic -2511 NR_135251 101928143 Hs.654609 NR_135251 ENSG00000284930 LOC101928143 - uncharacterized LOC101928143 ncRNA chr5-371 chr5 39473451 39473661 + 22.0 0.000 Intergenic Intergenic -46875 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr22-248 chr22 50190496 50190706 + 22.0 0.000 promoter-TSS (NM_001320488) promoter-TSS (NM_001320488) 14 NM_001320487 80305 Hs.517731 NM_025204 ENSG00000170638 TRABD LP6054|PP2447 TraB domain containing protein-coding chr1-1980 chr1 226664076 226664286 + 22.0 0.000 intron (NR_103784, intron 1 of 1) intron (NR_103784, intron 1 of 1) 10887 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr2-469 chr2 91659969 91660179 + 22.0 0.000 promoter-TSS (NR_027238) promoter-TSS (NR_027238) -125 NR_027238 654342 Hs.469287 NR_027238 LSP1P4 - LSP1 pseudogene 4 pseudo chr2-1317 chr2 55168566 55168776 + 22.0 0.000 Intergenic Intergenic -30840 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr17-602 chr17 75878015 75878225 + 22.0 0.000 exon (NM_033452, exon 1 of 6) exon (NM_033452, exon 1 of 6) 461 NM_033452 91107 Hs.293660 NM_033452 ENSG00000132481 TRIM47 GOA|RNF100 tripartite motif containing 47 protein-coding chr9-798 chr9 35848371 35848581 + 22.0 0.000 intron (NM_001042589, intron 11 of 13) intron (NM_001042589, intron 11 of 13) 19248 NM_001363621 51754 Hs.9187 NM_016446 ENSG00000137103 TMEM8B C9orf127|FP588|LINC00950|NAG-5|NAG5|NGX6 transmembrane protein 8B protein-coding chr20-71 chr20 35455033 35455243 + 22.0 0.000 promoter-TSS (NM_001319138) promoter-TSS (NM_001319138) -389 NM_001319138 8200 Hs.1573 NM_000557 ENSG00000125965 GDF5 BDA1C|BMP-14|BMP14|CDMP1|LAP-4|LAP4|OS5|SYM1B|SYNS2 growth differentiation factor 5 protein-coding chr2-804 chr2 73020931 73021141 + 22.0 0.000 intron (NR_138476, intron 5 of 14) intron (NR_138476, intron 5 of 14) 38136 NM_001330411 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr16-498 chr16 89633325 89633535 + 22.0 0.000 intron (NM_004413, intron 2 of 10) intron (NM_004413, intron 2 of 10) 12833 NM_004413 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr12-385 chr12 38906775 38906985 + 22.0 0.000 Intergenic Intergenic -1289 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr1-1729 chr1 62783822 62784032 + 22.0 0.000 promoter-TSS (NM_032852) promoter-TSS (NM_032852) -179 NM_178221 84938 Hs.7353 NM_032852 ENSG00000125703 ATG4C APG4-C|APG4C|AUTL1|AUTL3 autophagy related 4C cysteine peptidase protein-coding chr16-694 chr16 80993368 80993578 + 22.0 0.000 intron (NR_147842, intron 1 of 2) L1MEc|LINE|L1 4203 NM_001351973 56942 Hs.55028 NM_020188 ENSG00000103121 CMC2 2310061C15Rik|C16orf61|DC13 C-X9-C motif containing 2 protein-coding chr14-368 chr14 50714593 50714803 + 22.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -46392 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding chr3-380 chr3 155079918 155080128 + 22.0 0.000 promoter-TSS (NM_007289) promoter-TSS (NM_007289) 12 NM_007289 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr4-508 chr4 98430708 98430918 + 22.0 0.000 intron (NM_021159, intron 12 of 14) intron (NM_021159, intron 12 of 14) 169429 NM_001100426 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding chr6-1259 chr6 35606269 35606479 + 22.0 0.000 intron (NM_001145775, intron 6 of 11) L1PA17|LINE|L1 58415 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr3-750 chr3 183061395 183061605 + 22.0 0.000 intron (NR_120639, intron 5 of 15) L1MCa|LINE|L1 37743 NR_120640 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding chr17-960 chr17 73226525 73226735 + 22.0 0.000 intron (NM_001098832, intron 2 of 3) intron (NM_001098832, intron 2 of 3) 1087 NM_001289412 84923 Hs.741276 NM_032837 ENSG00000133193 FAM104A - family with sequence similarity 104 member A protein-coding chr17-1054 chr17 7833895 7834105 + 22.0 0.000 TTS (NM_020877) TTS (NM_020877) -5906 NM_001348716 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr12-519 chr12 49253025 49253235 + 22.0 0.000 intron (NM_001303114, intron 1 of 3) L2|LINE|L2 -11952 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr11-971 chr11 33701994 33702204 + 22.0 0.000 TTS (NM_203330) TTS (NM_203330) -1359 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr3-820 chr3 115989928 115990138 + 22.0 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) -84907 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr12-487 chr12 62192613 62192823 + 22.0 0.000 5' UTR (NM_178539, exon 1 of 5) 5' UTR (NM_178539, exon 1 of 5) 121 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr2-812 chr2 219176364 219176574 + 22.0 0.000 intron (NR_135628, intron 2 of 7) CpG 456 NR_135629 27013 Hs.4973 NM_015680 ENSG00000115649 CNPPD1 C2orf24|CGI-57 cyclin Pas1/PHO80 domain containing 1 protein-coding chr7-1019 chr7 7438913 7439123 + 22.0 0.000 intron (NM_001037763, intron 21 of 34) intron (NM_001037763, intron 21 of 34) 96855 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding chr19-583 chr19 33521784 33521994 + 22.0 0.000 promoter-TSS (NM_000285) promoter-TSS (NM_000285) -98 NM_001166056 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr15-120 chr15 63042500 63042710 + 22.0 0.000 promoter-TSS (NM_001018007) promoter-TSS (NM_001018007) -142 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr18-297 chr18 46939712 46939922 + 22.0 0.000 intron (NR_148563, intron 1 of 17) intron (NR_148563, intron 1 of 17) -6980 NM_031303 83473 Hs.404137 NM_031303 ENSG00000167216 KATNAL2 - katanin catalytic subunit A1 like 2 protein-coding chr1-1870 chr1 97893901 97894111 + 22.0 0.000 intron (NM_000110, intron 1 of 22) intron (NM_000110, intron 1 of 22) 27053 NM_001160301 1806 Hs.335034 NM_000110 ENSG00000188641 DPYD DHP|DHPDHASE|DPD dihydropyrimidine dehydrogenase protein-coding chr4-867 chr4 118989184 118989394 + 22.0 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) 100435 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr13-339 chr13 41668289 41668499 + 22.0 0.000 intron (NM_015058, intron 37 of 44) intron (NM_015058, intron 37 of 44) -99999 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr12-409 chr12 121060083 121060293 + 22.0 0.000 Intergenic Intergenic -20946 NM_001261825 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr22-483 chr22 42933859 42934069 + 22.0 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 13077 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr16-696 chr16 87582051 87582261 + 22.0 0.000 Intergenic Intergenic -19679 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr11-594 chr11 118438694 118438904 + 22.0 0.000 intron (NM_005933, intron 1 of 35) intron (NM_005933, intron 1 of 35) 2307 NM_005933 4297 Hs.258855 NM_005933 ENSG00000118058 KMT2A ALL-1|CXXC7|HRX|HTRX1|MLL|MLL1|MLL1A|TRX1|WDSTS lysine methyltransferase 2A protein-coding chr4-427 chr4 75724416 75724626 + 22.0 0.000 promoter-TSS (NM_001290049) promoter-TSS (NM_001290049) -1 NM_001290049 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr17-889 chr17 42133047 42133257 + 22.0 0.000 intron (NM_001252039, intron 1 of 6) Tigger19a|DNA|TcMar-Tigger 10348 NM_033194 94086 Hs.620611 NM_033194 ENSG00000260325 HSPB9 CT51 heat shock protein family B (small) member 9 protein-coding chr8-247 chr8 106658475 106658685 + 22.0 0.000 intron (NM_181354, intron 1 of 13) intron (NM_181354, intron 1 of 13) 772 NM_181354 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr6-172 chr6 41786428 41786638 + 22.0 0.000 promoter-TSS (NM_001134493) promoter-TSS (NM_001134493) -910 NM_001134493 100188893 Hs.731633 NM_001134493 ENSG00000214736 TOMM6 OBTP|TOM6 translocase of outer mitochondrial membrane 6 protein-coding chr3-929 chr3 67489887 67490097 + 22.0 0.000 intron (NM_001177599, intron 9 of 10) MER57F|LTR|ERV1 164622 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr3-555 chr3 144142392 144142602 + 22.0 0.000 Intergenic Intergenic 169416 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr5-735 chr5 156411234 156411444 + 22.0 0.000 intron (NM_001128209, intron 2 of 7) intron (NM_001128209, intron 2 of 7) 84175 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr16-611 chr16 84726212 84726422 + 22.0 0.000 intron (NM_001272075, intron 2 of 14) intron (NM_001272075, intron 2 of 14) 26317 NR_073577 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr1-824 chr1 158019457 158019667 + 22.0 0.000 intron (NM_001286349, intron 1 of 12) intron (NM_001286349, intron 1 of 12) -5988 NR_145471 100505785 Hs.664656 NR_145471 KIRREL1-IT1 KIRREL-IT1 KIRREL1 intronic transcript 1 ncRNA chr1-944 chr1 24502398 24502608 + 22.0 0.000 promoter-TSS (NR_045407) promoter-TSS (NR_045407) -121 NR_045408 100750325 Hs.399958 NR_045407 ENSG00000286061 RCAN3AS - RCAN3 antisense RNA ncRNA chr5-720 chr5 123951664 123951874 + 22.0 0.000 Intergenic L2c|LINE|L2 406352 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr2-1040 chr2 72887742 72887952 + 22.0 0.000 intron (NM_003124, intron 1 of 2) intron (NM_003124, intron 1 of 2) 439 NM_003124 6697 Hs.301540 NM_003124 ENSG00000116096 SPR SDR38C1 sepiapterin reductase protein-coding chr16-609 chr16 75623264 75623474 + 22.0 0.000 promoter-TSS (NM_001324453) promoter-TSS (NM_001324453) -88 NM_012091 23536 Hs.729312 NM_012091 ENSG00000065457 ADAT1 HADAT1 adenosine deaminase tRNA specific 1 protein-coding chr3-756 chr3 14393792 14394002 + 22.0 0.000 Intergenic Intergenic -8679 NM_001134367 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr19-799 chr19 47743435 47743645 + 22.0 0.000 TTS (NM_014601) TTS (NM_014601) -2006 NM_015710 29997 Hs.421907 NM_015710 ENSG00000105373 NOP53 GLTSCR2|PICT-1|PICT1 NOP53 ribosome biogenesis factor protein-coding chr10-683 chr10 132337160 132337370 + 22.0 0.000 promoter-TSS (NM_001309474) promoter-TSS (NM_001309474) -75 NM_001309474 80313 Hs.119897 NM_030626 ENSG00000148814 LRRC27 - leucine rich repeat containing 27 protein-coding chr17-479 chr17 28717712 28717922 + 22.0 0.000 promoter-TSS (NM_001256281) promoter-TSS (NM_001256281) 51 NM_031934 83871 Hs.301853 NM_031934 ENSG00000109113 RAB34 NARR|RAB39|RAH RAB34, member RAS oncogene family protein-coding chr9-694 chr9 131420963 131421173 + 22.0 0.000 Intergenic MER58A|DNA|hAT-Charlie -9022 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr16-619 chr16 1430722 1430932 + 22.0 0.000 5' UTR (NM_001365310, exon 1 of 2) 5' UTR (NM_001365310, exon 1 of 2) 2008 NM_001365310 105371045 NM_001365310 ENSG00000284395 LOC105371045 gs104 uncharacterized LOC105371045 protein-coding chr21-103 chr21 42672958 42673168 + 22.0 0.000 intron (NM_001001575, intron 1 of 14) intron (NM_001001575, intron 1 of 14) 19311 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr10-845 chr10 29522735 29522945 + 22.0 0.000 intron (NM_001323599, intron 16 of 38) intron (NM_001323599, intron 16 of 38) 22257 NR_030335 693189 NR_030335 ENSG00000207612 MIR604 MIRN604|hsa-mir-604 microRNA 604 ncRNA chr5-942 chr5 62937720 62937930 + 22.0 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 359006 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr12-924 chr12 96445779 96445989 + 22.0 0.000 Intergenic Intergenic -43693 NM_001306084 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr4-245 chr4 145180570 145180780 + 22.0 0.000 promoter-TSS (NM_001102653) promoter-TSS (NM_001102653) -86 NM_001366057 54726 Hs.270851 NM_017493 ENSG00000164164 OTUD4 DUBA6|HIN1|HSHIN1 OTU deubiquitinase 4 protein-coding chr3-291 chr3 126180511 126180721 + 22.0 0.000 promoter-TSS (NM_001270365) promoter-TSS (NM_001270365) -30 NM_012190 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr6-430 chr6 53263986 53264196 + 22.0 0.000 Intergenic Intergenic -12902 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr5-1342 chr5 170467032 170467242 + 22.0 0.000 intron (NM_001034838, intron 1 of 7) L2b|LINE|L2 -36883 NM_014592 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr9-632 chr9 114250213 114250423 + 22.0 0.000 intron (NM_032888, intron 24 of 60) intron (NM_032888, intron 24 of 60) 40884 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr5-335 chr5 179907916 179908126 + 22.0 0.000 promoter-TSS (NM_015043).2 promoter-TSS (NM_015043).2 -124 NM_198868 23061 Hs.155829 NM_015043 ENSG00000197226 TBC1D9B GRAMD9B TBC1 domain family member 9B protein-coding chr3-1035 chr3 160129583 160129793 + 22.0 0.000 intron (NR_108088, intron 3 of 9) Tigger18a|DNA|TcMar-Tigger 77404 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr17-634 chr17 79991741 79991951 + 22.0 0.000 intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) -40993 NM_001271846 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr3-311 chr3 128879433 128879643 + 22.0 0.000 promoter-TSS (NR_033426) promoter-TSS (NR_033426) 48 NR_033426 28976 Hs.567482 NM_014049 ENSG00000177646 ACAD9 MC1DN20|NPD002 acyl-CoA dehydrogenase family member 9 protein-coding chr3-573 chr3 123678243 123678453 + 22.0 0.000 intron (NM_001321309, intron 19 of 32) intron (NM_001321309, intron 19 of 32) -11296 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr5-1108 chr5 179142766 179142976 + 22.0 0.000 intron (NM_014244, intron 10 of 21) L1MB7|LINE|L1 82498 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr6-938 chr6 111625630 111625840 + 22.0 0.000 Intergenic Intergenic -19461 NM_001164281 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr8-901 chr8 84632727 84632937 + 22.0 0.000 intron (NM_001354308, intron 3 of 9) intron (NM_001354308, intron 3 of 9) -73095 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr3-594 chr3 122975518 122975728 + 22.0 0.000 intron (NR_046079, intron 1 of 22) MIRb|SINE|MIR 511 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr7-652 chr7 98854204 98854414 + 22.0 0.000 intron (NM_152913, intron 5 of 7) L2c|LINE|L2 15705 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr1-1586 chr1 33127227 33127437 + 22.0 0.000 Intergenic CpG 45154 NM_001301826 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr1-778 chr1 3856987 3857197 + 22.0 0.000 promoter-TSS (NM_001282669) promoter-TSS (NM_001282669) 119 NM_014704 9731 Hs.133089 NM_014704 ENSG00000116198 CEP104 CFAP256|GlyBP|JBTS25|KIAA0562|ROC22 centrosomal protein 104 protein-coding chr11-1427 chr11 63537311 63537521 + 22.0 0.000 intron (NM_004585, intron 1 of 3) intron (NM_004585, intron 1 of 3) 608 NM_004585 5920 Hs.17466 NM_004585 ENSG00000133321 PLAAT4 HRASLS4|HRSL4|PLA1/2-3|PLAAT-4|RARRES3|RIG1|TIG3 phospholipase A and acyltransferase 4 protein-coding chr7-680 chr7 128267326 128267536 + 22.0 0.000 Intergenic Intergenic 26153 NM_000230 3952 Hs.194236 NM_000230 ENSG00000174697 LEP LEPD|OB|OBS leptin protein-coding chr19-910 chr19 2329367 2329577 + 22.0 0.000 promoter-TSS (NM_016199) promoter-TSS (NM_016199) 788 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr15-380 chr15 67944421 67944631 + 22.0 0.000 Intergenic Intergenic -104481 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr6-366 chr6 3157622 3157832 + 22.0 0.000 promoter-TSS (NM_001310315) promoter-TSS (NM_001310315) -183 NM_001310315 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr2-710 chr2 95682575 95682785 + 22.0 0.000 Intergenic CpG 90679 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chrX-124 chrX 136910111 136910321 + 21.9 0.000 Intergenic Intergenic -29436 NR_028477 27316 Hs.380118 NM_002139 ENSG00000147274 RBMX HNRNPG|HNRPG|MRXS11|RBMXP1|RBMXRT|RNMX|hnRNP-G RNA binding motif protein X-linked protein-coding chr6-415 chr6 119575786 119575996 + 21.9 0.000 intron (NR_134600, intron 2 of 3) L1MB1|LINE|L1 26083 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr2-2322 chr2 119255861 119256071 + 21.9 0.000 intron (NM_001008410, intron 4 of 4) intron (NM_001008410, intron 4 of 4) -6895 NR_046721 100874111 Hs.704682 NR_046721 ENSG00000229867 STEAP3-AS1 - STEAP3 antisense RNA 1 ncRNA chr11-603 chr11 63668092 63668302 + 21.9 0.000 intron (NM_001290048, intron 1 of 12) intron (NM_001290048, intron 1 of 12) 3179 NM_015459 25923 Hs.356719 NM_015459 ENSG00000184743 ATL3 HSN1F atlastin GTPase 3 protein-coding chr7-1216 chr7 91165516 91165726 + 21.9 0.000 intron (NM_012395, intron 13 of 13) intron (NM_012395, intron 13 of 13) -98812 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr9-995 chr9 18861975 18862185 + 21.9 0.000 intron (NM_001040272, intron 23 of 28) intron (NM_001040272, intron 23 of 28) 171129 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr22-112 chr22 40856847 40857057 + 21.9 0.000 promoter-TSS (NM_001278589) promoter-TSS (NM_001278589) 56 NM_001278589 6767 Hs.712713 NM_003932 ENSG00000100380 ST13 AAG2|FAM10A1|FAM10A4|HIP|HOP|HSPABP|HSPABP1|P48|PRO0786|SNC6 ST13 Hsp70 interacting protein protein-coding chr11-1044 chr11 9170562 9170772 + 21.9 0.000 exon (NM_015213, exon 9 of 23) exon (NM_015213, exon 9 of 23) 76304 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr12-565 chr12 123436535 123436745 + 21.9 0.000 promoter-TSS (NR_130703) promoter-TSS (NR_130703) 93 NM_145058 196383 Hs.488173 NM_145058 ENSG00000150977 RILPL2 RLP2 Rab interacting lysosomal protein like 2 protein-coding chr12-1052 chr12 99911251 99911461 + 21.9 0.000 intron (NM_152788, intron 1 of 25) intron (NM_152788, intron 1 of 25) 73298 NM_152788 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr11-1457 chr11 77361231 77361441 + 21.9 0.000 intron (NM_001128620, intron 5 of 15) L2a|LINE|L2 -59670 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr13-126 chr13 76886352 76886562 + 21.9 0.000 promoter-TSS (NM_138444) promoter-TSS (NM_138444) -52 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr18-173 chr18 7177089 7177299 + 21.9 0.000 Intergenic Intergenic -53910 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr12-337 chr12 122266561 122266771 + 21.9 0.000 promoter-TSS (NM_022916) promoter-TSS (NM_022916) -172 NM_001351021 65082 Hs.487883 NM_022916 ENSG00000139719 VPS33A MPSPS VPS33A core subunit of CORVET and HOPS complexes protein-coding chr4-517 chr4 141046390 141046600 + 21.9 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 86974 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr16-433 chr16 47141756 47141966 + 21.9 0.000 intron (NM_001201477, intron 1 of 8) intron (NM_001201477, intron 1 of 8) 2084 NM_001201477 81831 Hs.645802 NM_018092 ENSG00000171208 NETO2 BTCL2|NEOT2 neuropilin and tolloid like 2 protein-coding chr5-395 chr5 71758008 71758218 + 21.9 0.000 Intergenic Intergenic 38838 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr17-1039 chr17 75364165 75364375 + 21.9 0.000 intron (NM_002086, intron 2 of 5) intron (NM_002086, intron 2 of 5) 41408 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr10-521 chr10 125147331 125147541 + 21.9 0.000 intron (NM_001290214, intron 1 of 10) intron (NM_001290214, intron 1 of 10) 11341 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr5-511 chr5 83096034 83096244 + 21.9 0.000 intron (NM_001318012, intron 1 of 7) L1M3a|LINE|L1 18592 NM_001318012 7518 Hs.567359 NM_003401 ENSG00000152422 XRCC4 SSMED X-ray repair cross complementing 4 protein-coding chr9-340 chr9 137551829 137552039 + 21.9 0.000 promoter-TSS (NM_032477) promoter-TSS (NM_032477) 55 NM_032477 64975 Hs.44017 NM_032477 ENSG00000182154 MRPL41 BMRP|MRP-L27|MRPL27|PIG3|RPML27 mitochondrial ribosomal protein L41 protein-coding chr11-972 chr11 57072627 57072837 + 21.9 0.000 Intergenic Intergenic 35198 NR_036445 219525 Hs.554519 NR_036445 ENSG00000283307 OR5AK4P PJCG3 olfactory receptor family 5 subfamily AK member 4 pseudogene pseudo chr1-790 chr1 43453511 43453721 + 21.9 0.000 exon (NM_001243526, exon 1 of 9) exon (NM_001243526, exon 1 of 9) 315 NM_031207 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr1-847 chr1 223992560 223992770 + 21.9 0.000 promoter-TSS (NR_132119) promoter-TSS (NR_132119) -21 NR_132119 441124 Hs.520589 NR_132119 GTF2IP20 - general transcription factor IIi pseudogene 20 pseudo chr11-678 chr11 111733185 111733395 + 21.9 0.000 intron (NM_181699, intron 15 of 15) intron (NM_181699, intron 15 of 15) 33099 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr5-1053 chr5 109743952 109744162 + 21.9 0.000 intron (NM_002372, intron 4 of 21) L2c|LINE|L2 54691 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr12-319 chr12 109900311 109900521 + 21.9 0.000 promoter-TSS (NM_032300) promoter-TSS (NM_032300) 142 NM_001143852 84260 Hs.410924 NM_032300 ENSG00000139437 TCHP TpMs trichoplein keratin filament binding protein-coding chr6-733 chr6 148324621 148324831 + 21.9 0.000 intron (NM_001346505, intron 1 of 19) LTR67B|LTR|ERVL -18112 NM_015278 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr6-397 chr6 127147089 127147299 + 21.9 0.000 intron (NM_032784, intron 1 of 4) intron (NM_032784, intron 1 of 4) 28523 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr10-784 chr10 64486337 64486547 + 21.9 0.000 Intergenic Intergenic -339086 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr2-1229 chr2 33212222 33212432 + 21.9 0.000 intron (NM_206943, intron 7 of 33) intron (NM_206943, intron 7 of 33) 77730 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr4-354 chr4 77156669 77156879 + 21.9 0.000 promoter-TSS (NM_004354) promoter-TSS (NM_004354) -433 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr4-417 chr4 134366022 134366232 + 21.9 0.000 Intergenic Intergenic -57741 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr4-1098 chr4 186625021 186625231 + 21.9 0.000 intron (NM_005245, intron 9 of 26) intron (NM_005245, intron 9 of 26) -69559 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr6-833 chr6 147195247 147195457 + 21.9 0.000 intron (NR_034115, intron 1 of 10) intron (NR_034115, intron 1 of 10) -9006 NM_139244 134957 Hs.86320 NM_139244 ENSG00000164506 STXBP5 LGL3|LLGL3|Nbla04300 syntaxin binding protein 5 protein-coding chr9-787 chr9 124366557 124366767 + 21.9 0.000 intron (NM_002799, intron 6 of 7) Tigger3b|DNA|TcMar-Tigger 13189 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr7-1012 chr7 2404044 2404254 + 21.9 0.000 intron (NM_018641, intron 1 of 1) CpG 538 NM_001243795 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr16-761 chr16 67170236 67170446 + 21.9 0.000 promoter-TSS (NM_001276307) promoter-TSS (NM_001276307) -156 NM_001276309 8996 Hs.513667 NM_003946 ENSG00000140939 NOL3 ARC|FCM|MYOCL1|MYP|NOP|NOP30 nucleolar protein 3 protein-coding chr17-468 chr17 48831018 48831228 + 21.9 0.000 promoter-TSS (NM_001261395) promoter-TSS (NM_001261395) 88 NM_001261390 10241 Hs.514920 NM_005831 ENSG00000136436 CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 protein-coding chr4-602 chr4 153257273 153257483 + 21.9 0.000 promoter-TSS (NM_001302694) promoter-TSS (NM_001302694) -1 NM_001351054 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr11-921 chr11 2741986 2742196 + 21.9 0.000 intron (NM_181798, intron 11 of 15) intron (NM_181798, intron 11 of 15) -42093 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chrX-54 chrX 46912209 46912419 + 21.9 0.000 promoter-TSS (NM_014735) promoter-TSS (NM_014735) 38 NM_001077445 9767 Hs.371977 NM_014735 ENSG00000102221 JADE3 JADE-3|PHF16 jade family PHD finger 3 protein-coding chr4-170 chr4 1712160 1712370 + 21.9 0.000 promoter-TSS (NM_001306074) promoter-TSS (NM_001306074) 54 NM_006527 7884 Hs.298345 NM_006527 ENSG00000163950 SLBP HBP stem-loop binding protein protein-coding chr20-255 chr20 56439865 56440075 + 21.9 0.000 intron (NM_001164116, intron 3 of 6) intron (NM_001164116, intron 3 of 6) 27710 NM_001164114 57091 Hs.473144 NM_020356 ENSG00000087589 CASS4 C20orf32|CAS4|HEFL|HEPL Cas scaffold protein family member 4 protein-coding chr17-560 chr17 41836034 41836244 + 21.9 0.000 promoter-TSS (NM_052935) promoter-TSS (NM_052935) 93 NM_052935 115024 Hs.237536 NM_052935 ENSG00000141698 NT5C3B NT5C3L|cN-IIIB 5'-nucleotidase, cytosolic IIIB protein-coding chr3-418 chr3 50226182 50226392 + 21.9 0.000 promoter-TSS (NM_001282619) promoter-TSS (NM_001282619) -781 NM_001282620 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr6-451 chr6 82750634 82750844 + 21.9 0.000 Intergenic Intergenic 315102 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr14-664 chr14 62824180 62824390 + 21.9 0.000 intron (NM_139318, intron 8 of 10) L1MEg|LINE|L1 221173 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr12-804 chr12 52507168 52507378 + 21.9 0.000 Intergenic L1MC1|LINE|L1 13121 NM_000424 3852 Hs.433845 NM_000424 ENSG00000186081 KRT5 CK5|DDD|DDD1|EBS2|K5|KRT5A keratin 5 protein-coding chr12-318 chr12 62466770 62466980 + 21.9 0.000 promoter-TSS (NM_001278471) promoter-TSS (NM_001278471) 49 NM_001278470 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr17-901 chr17 64442219 64442429 + 21.9 0.000 Intergenic Intergenic -6791 NM_001085423 284021 Hs.631749 NM_001085423 ENSG00000271605 MILR1 Allergin-1|C17orf60|MCA-32|MCA32 mast cell immunoglobulin like receptor 1 protein-coding chr10-276 chr10 27155098 27155308 + 21.9 0.000 promoter-TSS (NM_014263) promoter-TSS (NM_014263) 379 NR_135469 84930 Hs.276905 NM_032844 ENSG00000120539 MASTL GREATWALL|GW|GWL|MAST-L|THC2 microtubule associated serine/threonine kinase like protein-coding chr1-1310 chr1 85569279 85569489 + 21.9 0.000 intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 8816 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr16-442 chr16 2501323 2501533 + 21.9 0.000 3' UTR (NM_001199107, exon 8 of 8) 3' UTR (NM_001199107, exon 8 of 8) -12298 NM_001198569 527 Hs.389107 NM_001694 ENSG00000185883 ATP6V0C ATP6C|ATP6L|ATPL|VATL|VPPC|Vma3 ATPase H+ transporting V0 subunit c protein-coding chr19-736 chr19 9792307 9792517 + 21.9 0.000 intron (NR_148545, intron 1 of 1) CpG 768 NR_148545 100505555 Hs.445295 NR_148545 ENSG00000196605 LOC100505555 - uncharacterized LOC100505555 ncRNA chr2-1280 chr2 91598584 91598794 + 21.9 0.000 Intergenic Intergenic 61260 NR_027238 654342 Hs.469287 NR_027238 LSP1P4 - LSP1 pseudogene 4 pseudo chr15-389 chr15 38714292 38714502 + 21.9 0.000 Intergenic Intergenic 17799 NR_160786 chr2-521 chr2 217902015 217902225 + 21.9 0.000 intron (NM_001308023, intron 3 of 29) intron (NM_001308023, intron 3 of 29) -1492 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr14-392 chr14 35121673 35121883 + 21.9 0.000 promoter-TSS (NM_001256681) promoter-TSS (NM_001256681) 764 NM_001305155 55012 Hs.530712 NM_017917 ENSG00000092020 PPP2R3C C14orf10|G4-1|G5pr|GDRM|SPGF36 protein phosphatase 2 regulatory subunit B''gamma protein-coding chr20-421 chr20 48025056 48025266 + 21.9 0.000 Intergenic Intergenic -35044 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA chr2-1522 chr2 85468612 85468822 + 21.9 0.000 Intergenic Intergenic 49786 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr6-376 chr6 148746667 148746877 + 21.9 0.000 promoter-TSS (NM_005715) promoter-TSS (NM_005715) -258 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr17-591 chr17 75997240 75997450 + 21.9 0.000 intron (NM_001113324, intron 3 of 3) intron (NM_001113324, intron 3 of 3) -3561 NM_001258 1018 Hs.706766 NM_001258 ENSG00000250506 CDK3 - cyclin dependent kinase 3 protein-coding chr4-1207 chr4 107718364 107718574 + 21.9 0.000 intron (NM_005443, intron 1 of 11) intron (NM_005443, intron 1 of 11) 1765 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr18-164 chr18 22933351 22933561 + 21.9 0.000 promoter-TSS (NM_203292) promoter-TSS (NM_203292) 107 NR_039895 100616139 NR_039895 ENSG00000284331 MIR4741 mir-4741 microRNA 4741 ncRNA chr11-887 chr11 121595808 121596018 + 21.9 0.000 intron (NM_003105, intron 32 of 47) intron (NM_003105, intron 32 of 47) 143599 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr5-227 chr5 180494196 180494406 + 21.9 0.000 promoter-TSS (NM_001370472) promoter-TSS (NM_001370472) -78 NR_163438 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding chr1-381 chr1 3410188 3410398 + 21.9 0.000 intron (NM_022114, intron 8 of 16) intron (NM_022114, intron 8 of 16) -44372 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr16-308 chr16 71484377 71484587 + 21.9 0.000 intron (NM_006961, intron 2 of 5) intron (NM_006961, intron 2 of 5) 4842 NM_006961 7567 Hs.660076 NM_006961 ENSG00000157429 ZNF19 KOX12 zinc finger protein 19 protein-coding chr11-1126 chr11 48081316 48081526 + 21.9 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) -15361 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr16-853 chr16 67936867 67937077 + 21.9 0.000 promoter-TSS (NM_002801) promoter-TSS (NM_002801) -122 NM_002801 5699 Hs.9661 NM_002801 ENSG00000205220 PSMB10 LMP10|MECL1|beta2i proteasome subunit beta 10 protein-coding chr11-1042 chr11 8807762 8807972 + 21.9 0.000 intron (NR_120590, intron 4 of 4) intron (NR_120590, intron 4 of 4) 2807 NM_213618 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr1-542 chr1 90851528 90851738 + 21.9 0.000 promoter-TSS (NR_146610) promoter-TSS (NR_146610) 5 NR_135038 105378853 Hs.546492 NR_135038 ENSG00000233593 LINC02609 - long intergenic non-protein coding RNA 2609 ncRNA chr12-602 chr12 27966868 27967078 + 21.9 0.000 intron (NM_198964, intron 2 of 2) intron (NM_198964, intron 2 of 2) 3003 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr5-819 chr5 172758154 172758364 + 21.9 0.000 non-coding (NR_161233, exon 2 of 4) non-coding (NR_161233, exon 2 of 4) 2756 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr2-741 chr2 239003043 239003253 + 21.9 0.000 Intergenic Intergenic 65766 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr14-643 chr14 100031609 100031819 + 21.9 0.000 intron (NM_001330221, intron 1 of 13) intron (NM_001330221, intron 1 of 13) -33708 NM_016337 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr17-630 chr17 50933622 50933832 + 21.9 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -65749 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr13-395 chr13 49356316 49356526 + 21.9 0.000 intron (NM_001079670, intron 6 of 10) L3|LINE|CR1 45121 NM_030925 81617 Hs.87159 NM_030925 ENSG00000102547 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39 like protein-coding chr19-1599 chr19 19490321 19490531 + 21.9 0.000 intron (NM_001359631, intron 2 of 10) intron (NM_001359631, intron 2 of 10) 25122 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr2-437 chr2 70190757 70190967 + 21.9 0.000 promoter-TSS (NM_001348758) promoter-TSS (NM_001348758) -151 NM_001348764 54980 Hs.720049 NM_017880 ENSG00000115998 C2orf42 - chromosome 2 open reading frame 42 protein-coding chr2-581 chr2 53786960 53787170 + 21.9 0.000 promoter-TSS (NM_015701) promoter-TSS (NM_015701) 21 NM_015701 27248 Hs.438336 NM_015701 ENSG00000068912 ERLEC1 C2orf30|CIM|CL24936|CL25084|HEL117|XTP3-B|XTP3TPB endoplasmic reticulum lectin 1 protein-coding chr17-939 chr17 2172132 2172342 + 21.9 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -60441 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr5-719 chr5 118224672 118224882 + 21.9 0.000 intron (NR_104997, intron 2 of 2) intron (NR_104997, intron 2 of 2) -57797 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr16-1068 chr16 24734368 24734578 + 21.9 0.000 intron (NM_014494, intron 2 of 24) intron (NM_014494, intron 2 of 24) 4822 NM_001330520 27327 Hs.655057 NM_014494 ENSG00000090905 TNRC6A CAGH26|FAME6|GW1|GW182|TNRC6 trinucleotide repeat containing adaptor 6A protein-coding chr22-371 chr22 50184212 50184422 + 21.9 0.000 Intergenic Intergenic -1596 NM_001320485 80305 Hs.517731 NM_025204 ENSG00000170638 TRABD LP6054|PP2447 TraB domain containing protein-coding chr1-2452 chr1 39866846 39867056 + 21.9 0.000 intron (NM_017646, intron 1 of 10) AluJo|SINE|Alu 16553 NM_017646 54802 Hs.356554 NM_017646 ENSG00000043514 TRIT1 COXPD35|GRO1|IPPT|IPT|IPTase|MOD5|hGRO1 tRNA isopentenyltransferase 1 protein-coding chr16-920 chr16 88234566 88234776 + 21.9 0.000 Intergenic CpG 40390 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr12-630 chr12 50987028 50987238 + 21.9 0.000 non-coding (NR_033421, exon 16 of 16) non-coding (NR_033421, exon 16 of 16) 22082 NM_001174130 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr12-713 chr12 110316900 110317110 + 21.9 0.000 intron (NM_170665, intron 5 of 19) intron (NM_170665, intron 5 of 19) 35758 NM_170665 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr3-1168 chr3 138349285 138349495 + 21.9 0.000 intron (NM_001252090, intron 1 of 5) L2c|LINE|L2 170 NM_001252090 22808 Hs.527021 NM_012219 ENSG00000158186 MRAS M-RAs|R-RAS3|RRAS3 muscle RAS oncogene homolog protein-coding chr17-319 chr17 76384463 76384673 + 21.9 0.000 promoter-TSS (NM_021972) promoter-TSS (NM_021972) -41 NM_021972 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr15-226 chr15 75204903 75205113 + 21.9 0.000 intron (NM_015492, intron 1 of 2) intron (NM_015492, intron 1 of 2) 3126 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr12-736 chr12 121452444 121452654 + 21.9 0.000 intron (NM_001005366, intron 13 of 22) CpG -8197 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr5-421 chr5 10192293 10192503 + 21.9 0.000 Intergenic LTR90B|LTR|LTR 57490 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr5-796 chr5 37072251 37072461 + 21.9 0.000 Intergenic L2c|LINE|L2 -176690 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chr15-297 chr15 75023456 75023666 + 21.9 0.000 promoter-TSS (NM_001301103) promoter-TSS (NM_001301103) 6 NR_125369 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chr1-1002 chr1 44328014 44328224 + 21.9 0.000 intron (NM_001301701, intron 2 of 7) intron (NM_001301701, intron 2 of 7) 27138 NM_024066 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding chr3-842 chr3 16090272 16090482 + 21.9 0.000 Intergenic Intergenic -84303 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr19-876 chr19 33796011 33796221 + 21.9 0.000 promoter-TSS (NM_001129995) promoter-TSS (NM_001129995) -754 NM_024076 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr16-461 chr16 29785112 29785322 + 21.9 0.000 Intergenic CpG -5496 NM_007317 3835 Hs.612151 NM_007317 ENSG00000079616 KIF22 A-328A3.2|KID|KNSL4|OBP|OBP-1|OBP-2|SEMDJL2 kinesin family member 22 protein-coding chr1-1158 chr1 44775567 44775777 + 21.9 0.000 promoter-TSS (NR_000015) promoter-TSS (NR_000015) 132 NM_001012 6202 Hs.512675 NM_001012 ENSG00000142937 RPS8 S8 ribosomal protein S8 protein-coding chr9-1159 chr9 27408090 27408300 + 21.9 0.000 intron (NM_024761, intron 2 of 3) intron (NM_024761, intron 2 of 3) -111045 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chrX-157 chrX 74614539 74614749 + 21.9 0.000 promoter-TSS (NM_016120) promoter-TSS (NM_016120) -20 NM_183353 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr7-541 chr7 100867050 100867260 + 21.9 0.000 promoter-TSS (NM_003302) promoter-TSS (NM_003302) -232 NM_003302 7205 Hs.534360 NM_003302 ENSG00000087077 TRIP6 OIP-1|OIP1|TRIP-6|TRIP6i2|ZRP-1 thyroid hormone receptor interactor 6 protein-coding chr2-1581 chr2 69171452 69171662 + 21.9 0.000 intron (NM_032208, intron 14 of 17) intron (NM_032208, intron 14 of 17) 67875 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr17-1109 chr17 910664 910874 + 21.9 0.000 non-coding (NR_135633, exon 2 of 2) non-coding (NR_135633, exon 2 of 2) 1137 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr9-906 chr9 71683890 71684100 + 21.9 0.000 3' UTR (NM_001349784, exon 24 of 24) 3' UTR (NM_001349784, exon 24 of 24) 84518 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr2-1011 chr2 236871620 236871830 + 21.9 0.000 Intergenic Intergenic 184442 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chrX-295 chrX 107711032 107711242 + 21.9 0.000 Intergenic Intergenic 5371 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr18-126 chr18 36744300 36744510 + 21.8 0.000 intron (NM_001281740, intron 23 of 28) intron (NM_001281740, intron 23 of 28) -80987 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr14-544 chr14 69077919 69078129 + 21.8 0.000 intron (NM_003861, intron 6 of 8) intron (NM_003861, intron 6 of 8) 74575 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr22-179 chr22 19178815 19179025 + 21.8 0.000 promoter-TSS (NM_001287387) promoter-TSS (NM_001287387) -57 NR_046298 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CMS23|CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr13-346 chr13 67121195 67121405 + 21.8 0.000 intron (NM_001318372, intron 2 of 4) intron (NM_001318372, intron 2 of 4) 109036 NM_001318372 5101 Hs.654709 NM_020403 ENSG00000184226 PCDH9 - protocadherin 9 protein-coding chr13-144 chr13 52455243 52455453 + 21.8 0.000 promoter-TSS (NM_001286686) promoter-TSS (NM_001286686) -12 NM_001286687 26586 Hs.444028 NM_018204 ENSG00000136108 CKAP2 LB1|TMAP|se20-10 cytoskeleton associated protein 2 protein-coding chr3-372 chr3 100401210 100401420 + 21.8 0.000 promoter-TSS (NM_001085451) promoter-TSS (NM_001085451) -224 NM_001085451 348801 Hs.591294 NM_001085451 ENSG00000206535 LNP1 NP3 leukemia NUP98 fusion partner 1 protein-coding chr11-1735 chr11 108560163 108560373 + 21.8 0.000 intron (NM_015065, intron 1 of 5) intron (NM_015065, intron 1 of 5) -8039 NM_001144763 23086 Hs.28540 NM_015065 ENSG00000110723 EXPH5 SLAC2-B|SLAC2B exophilin 5 protein-coding chr11-1040 chr11 3723141 3723351 + 21.8 0.000 exon (NM_001365127, exon 16 of 33) exon (NM_001365127, exon 16 of 33) -51862 NM_020402 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr12-902 chr12 111455756 111455966 + 21.8 0.000 intron (NM_001310121, intron 23 of 25) intron (NM_001310121, intron 23 of 25) 20999 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr20-598 chr20 44522125 44522335 + 21.8 0.000 promoter-TSS (NM_198941) promoter-TSS (NM_198941) -114 NM_198941 10955 Hs.272168 NM_006811 ENSG00000132824 SERINC3 AIGP1|DIFF33|SBBI99|TDE|TDE1|TMS-1 serine incorporator 3 protein-coding chr16-687 chr16 56610203 56610413 + 21.8 0.000 TTS (NM_005953) TTS (NM_005953) 1724 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT-2|MT-II|MT2 metallothionein 2A protein-coding chr1-353 chr1 33180787 33180997 + 21.8 0.000 intron (NM_018207, intron 1 of 4) CpG 1151 NM_018207 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr21-89 chr21 33894795 33895005 + 21.8 0.000 3' UTR (NM_003024, exon 40 of 40) 3' UTR (NM_003024, exon 40 of 40) 20904 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr18-254 chr18 23365770 23365980 + 21.8 0.000 intron (NM_032933, intron 10 of 14) intron (NM_032933, intron 10 of 14) 72086 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr4-498 chr4 24857990 24858200 + 21.8 0.000 intron (NM_001130726, intron 3 of 11) intron (NM_001130726, intron 3 of 11) 54883 NM_001130726 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr21-98 chr21 36135451 36135661 + 21.8 0.000 intron (NM_001236, intron 1 of 2) CpG 477 NM_001236 874 Hs.154510 NM_001236 ENSG00000159231 CBR3 HEL-S-25|SDR21C2|hCBR3 carbonyl reductase 3 protein-coding chr19-1329 chr19 1279838 1280048 + 21.8 0.000 TTS (NM_017914) TTS (NM_017914) 4413 NM_017914 55009 Hs.591383 NM_017914 ENSG00000228300 C19orf24 - chromosome 19 open reading frame 24 protein-coding chr7-1109 chr7 95335089 95335299 + 21.8 0.000 Intergenic Intergenic -10662 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr4-1431 chr4 72858394 72858604 + 21.8 0.000 Intergenic Intergenic 211217 NM_173827 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding chr2-1405 chr2 96260598 96260808 + 21.8 0.000 intron (NM_017849, intron 2 of 3) intron (NM_017849, intron 2 of 3) 5294 NM_001193304 55654 Hs.164303 NM_017849 ENSG00000135956 TMEM127 - transmembrane protein 127 protein-coding chr7-485 chr7 128410027 128410237 + 21.8 0.000 promoter-TSS (NM_000883) promoter-TSS (NM_000883) -150 NM_001142576 3614 Hs.654401 NM_000883 ENSG00000106348 IMPDH1 IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608 inosine monophosphate dehydrogenase 1 protein-coding chr8-279 chr8 56580739 56580949 + 21.8 0.000 Intergenic OldhAT1|DNA|hAT-Ac -21021 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr22-366 chr22 35431022 35431232 + 21.8 0.000 Intergenic Intergenic 30987 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|MGORS8|P1-CDC46 minichromosome maintenance complex component 5 protein-coding chr2-1485 chr2 163348215 163348425 + 21.8 0.000 Intergenic CpG 387688 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr20-490 chr20 54212348 54212558 + 21.8 0.000 intron (NM_002623, intron 1 of 3) intron (NM_002623, intron 1 of 3) 4366 NM_002623 5203 Hs.91161 NM_002623 ENSG00000101132 PFDN4 C1|PFD4 prefoldin subunit 4 protein-coding chr2-823 chr2 54945817 54946027 + 21.8 0.000 intron (NM_001039753, intron 27 of 40) intron (NM_001039753, intron 27 of 40) 64350 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr16-720 chr16 30741509 30741719 + 21.8 0.000 TTS (NM_006662) TTS (NM_006662) 972 NM_001256829 100862671 Hs.667372 NM_001256829 ENSG00000281991 TMEM265 IFITMD8 transmembrane protein 265 protein-coding chr16-284 chr16 87383533 87383743 + 21.8 0.000 exon (NM_024735, exon 1 of 9) exon (NM_024735, exon 1 of 9) 138 NM_024735 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chrX-208 chrX 24231212 24231422 + 21.8 0.000 Intergenic L1MEg|LINE|L1 81588 NM_001178084 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr9-1150 chr9 3793976 3794186 + 21.8 0.000 Intergenic Intergenic -104565 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr3-557 chr3 160399083 160399293 + 21.8 0.000 promoter-TSS (NM_001190241) promoter-TSS (NM_001190241) 37 NM_020800 57560 Hs.478095 NM_020800 ENSG00000068885 IFT80 ATD2|SRTD2|WDR56 intraflagellar transport 80 protein-coding chr6-820 chr6 119621227 119621437 + 21.8 0.000 intron (NR_134600, intron 2 of 3) intron (NR_134600, intron 2 of 3) 71524 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr1-1297 chr1 8626569 8626779 + 21.8 0.000 intron (NM_001042681, intron 2 of 22) LTR19A|LTR|ERV1 -131761 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr5-510 chr5 67268552 67268762 + 21.8 0.000 Intergenic Intergenic -71858 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr10-886 chr10 89374515 89374725 + 21.8 0.000 Intergenic Intergenic -3436 NM_001010987 439996 Hs.500491 NM_001010987 ENSG00000204010 IFIT1B IFIT1L|bA149I23.6 interferon induced protein with tetratricopeptide repeats 1B protein-coding chr3-844 chr3 18295209 18295419 + 21.8 0.000 Intergenic L1MA4A|LINE|L1 130025 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr6-326 chr6 136290370 136290580 + 21.8 0.000 promoter-TSS (NM_001301038) promoter-TSS (NM_001301038) -624 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr20-433 chr20 46683929 46684139 + 21.8 0.000 TTS (NM_033550) TTS (NM_033550) 451 NM_001011554 64849 Hs.655498 NM_022829 ENSG00000158296 SLC13A3 ARLIAK|NADC3|SDCT2 solute carrier family 13 member 3 protein-coding chr2-1045 chr2 104873429 104873639 + 21.8 0.000 promoter-TSS (NR_110373) promoter-TSS (NR_110373) -939 NR_110373 102682016 Hs.638438 NR_110373 ENSG00000229743 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA chr1-825 chr1 158149714 158149924 + 21.8 0.000 Intergenic CpG -9179 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr15-335 chr15 51622132 51622342 + 21.8 0.000 intron (NM_001174116, intron 1 of 42) CpG 534 NM_001174116 23312 Hs.511386 NM_015263 ENSG00000104093 DMXL2 DFNA71|PEPNS|RC3 Dmx like 2 protein-coding chr2-811 chr2 173965458 173965668 + 21.8 0.000 5' UTR (NM_001172712, exon 1 of 7) 5' UTR (NM_001172712, exon 1 of 7) 139 NM_003111 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr11-1142 chr11 108967719 108967929 + 21.8 0.000 Intergenic Intergenic 302755 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr8-708 chr8 129996726 129996936 + 21.8 0.000 intron (NM_001353245, intron 1 of 13) MamTip2|DNA|hAT-Tip100 11622 NR_049826 100847051 NR_049826 ENSG00000264653 MIR5194 mir-5194 microRNA 5194 ncRNA chr15-454 chr15 98800740 98800950 + 21.8 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 16419 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr17-1601 chr17 65742683 65742893 + 21.8 0.000 intron (NR_126542, intron 2 of 5) intron (NR_126542, intron 2 of 5) 83663 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr5-817 chr5 150154394 150154604 + 21.8 0.000 intron (NR_149150, intron 1 of 1) MIRb|SINE|MIR 1346 NM_001355016 5159 Hs.509067 NM_002609 ENSG00000113721 PDGFRB CD140B|IBGC4|IMF1|JTK12|KOGS|PDGFR|PDGFR-1|PDGFR1|PENTT platelet derived growth factor receptor beta protein-coding chr2-434 chr2 39121142 39121352 + 21.8 0.000 promoter-TSS (NM_005633) promoter-TSS (NM_005633) -784 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr11-750 chr11 96306964 96307174 + 21.8 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -34369 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr2-490 chr2 28392622 28392832 + 21.8 0.000 promoter-TSS (NM_005253) promoter-TSS (NM_005253) -131 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr2-1336 chr2 121390171 121390381 + 21.8 0.000 intron (NM_015282, intron 29 of 38) intron (NM_015282, intron 29 of 38) -105074 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr20-438 chr20 209016 209226 + 21.8 0.000 Intergenic Intergenic -18137 NM_080831 140881 Hs.112087 NM_080831 ENSG00000125903 DEFB129 C20orf87|DEFB-29|DEFB29|bA530N10.3|hBD-29 defensin beta 129 protein-coding chr15-95 chr15 41828062 41828272 + 21.8 0.000 promoter-TSS (NM_001198588) promoter-TSS (NM_001198588) 75 NM_001114632 100137047 Hs.198161 NM_001114632 ENSG00000243789 JMJD7 - jumonji domain containing 7 protein-coding chr1-493 chr1 32179669 32179879 + 21.8 0.000 promoter-TSS (NM_175852) promoter-TSS (NM_175852) 99 NM_175852 200081 Hs.17987 NM_175852 ENSG00000084652 TXLNA IL14|TXLN taxilin alpha protein-coding chr11-899 chr11 33997181 33997391 + 21.8 0.000 Intergenic Intergenic -54445 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr13-305 chr13 51364470 51364680 + 21.8 0.000 3' UTR (NM_001039937, exon 19 of 19) 3' UTR (NM_001039937, exon 19 of 19) -15936 NR_049878 100847003 NR_049878 ENSG00000266072 MIR5693 - microRNA 5693 ncRNA chr4-488 chr4 128107922 128108132 + 21.8 0.000 3' UTR (NM_032239, exon 9 of 9) 3' UTR (NM_032239, exon 9 of 9) 46715 NR_146772 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr16-402 chr16 3999459 3999669 + 21.8 0.000 intron (NM_001116, intron 3 of 10) intron (NM_001116, intron 3 of 10) -49120 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr5-885 chr5 120056033 120056243 + 21.8 0.000 Intergenic Intergenic -408140 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chrX-68 chrX 154547349 154547559 + 21.8 0.000 promoter-TSS (NM_001145255) promoter-TSS (NM_001145255) 115 NM_001042351 2539 Hs.461047 NM_000402 ENSG00000160211 G6PD G6PD1 glucose-6-phosphate dehydrogenase protein-coding chr12-212 chr12 19439468 19439678 + 21.8 0.000 promoter-TSS (NM_153207) promoter-TSS (NM_153207) 81 NM_001114176 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr16-881 chr16 82043993 82044203 + 21.8 0.000 intron (NM_002153, intron 1 of 4) Plat_L3|LINE|CR1 8845 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chr14-425 chr14 91919932 91920142 + 21.8 0.000 intron (NM_006329, intron 4 of 10) intron (NM_006329, intron 4 of 10) 27665 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr15-497 chr15 68994112 68994322 + 21.8 0.000 intron (NR_033672, intron 2 of 16) HERV3-int|LTR|ERV1 -20478 NM_024505 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr5-854 chr5 108801846 108802056 + 21.8 0.000 intron (NM_001308028, intron 3 of 17) MER44C|DNA|TcMar-Tigger 53003 NR_146155 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr7-678 chr7 100158497 100158707 + 21.8 0.000 TTS (NM_024637) TTS (NM_024637) 121 NM_001303470 55262 Hs.533139 NM_018275 ENSG00000146826 MAP11 C7orf43|MCPH25 microtubule associated protein 11 protein-coding chr6-786 chr6 116008784 116008994 + 21.8 0.000 intron (NM_002031, intron 1 of 7) MER5A|DNA|hAT-Charlie -29842 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo chr15-483 chr15 100664046 100664256 + 21.8 0.000 Intergenic Intergenic 61562 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 - ankyrin repeat and SOCS box containing 7 protein-coding chr6-671 chr6 108080407 108080617 + 21.8 0.000 Intergenic L1PBa1|LINE|L1 -5771 NM_014028 28962 Hs.226780 NM_014028 ENSG00000081087 OSTM1 GIPN|GL|HSPC019|OPTB5 osteoclastogenesis associated transmembrane protein 1 protein-coding chr5-509 chr5 65861962 65862172 + 21.8 0.000 Intergenic Intergenic -64487 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr1-1119 chr1 39410918 39411128 + 21.8 0.000 exon (NM_015038, exon 1 of 1) exon (NM_015038, exon 1 of 1) 1950 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr1-519 chr1 38991080 38991290 + 21.8 0.000 promoter-TSS (NM_001136275) promoter-TSS (NM_001136275) -59 NM_001136275 79647 Hs.293563 NM_024595 ENSG00000174574 AKIRIN1 C1orf108|STRF2 akirin 1 protein-coding chr9-766 chr9 121876726 121876936 + 21.8 0.000 intron (NM_001139442, intron 6 of 8) MER5A|DNA|hAT-Charlie 134046 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr11-515 chr11 47248648 47248858 + 21.8 0.000 promoter-TSS (NM_001357016) promoter-TSS (NM_001357016) 61 NM_001610 53 Hs.532492 NM_001610 ENSG00000134575 ACP2 LAP acid phosphatase 2, lysosomal protein-coding chr14-270 chr14 60091921 60092131 + 21.8 0.000 5' UTR (NM_022495, exon 1 of 10) 5' UTR (NM_022495, exon 1 of 10) 103 NM_001330177 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chrX-75 chrX 54044498 54044708 + 21.8 0.000 promoter-TSS (NM_001184897) promoter-TSS (NM_001184897) -130 NM_015107 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr19-822 chr19 863930 864140 + 21.8 0.000 TTS (NM_001317335) TTS (NM_001317335) 4371 NM_001928 1675 Hs.155597 NM_001928 ENSG00000197766 CFD ADIPSIN|ADN|DF|PFD complement factor D protein-coding chr1-1174 chr1 173476915 173477125 + 21.8 0.000 promoter-TSS (NM_004905) promoter-TSS (NM_004905) 135 NR_037845 100506023 Hs.731284 NR_037845 LOC100506023 - uncharacterized LOC100506023 ncRNA chr7-615 chr7 106661019 106661229 + 21.8 0.000 promoter-TSS (NM_175884) promoter-TSS (NM_175884) 34 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr1-829 chr1 202926985 202927195 + 21.8 0.000 5' UTR (NM_021633, exon 1 of 12) 5' UTR (NM_021633, exon 1 of 12) 144 NM_001303109 59349 Hs.706793 NM_021633 ENSG00000117153 KLHL12 C3IP1|DKIR kelch like family member 12 protein-coding chr7-989 chr7 78301477 78301687 + 21.8 0.000 intron (NM_001301128, intron 9 of 20) intron (NM_001301128, intron 9 of 20) -45660 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr12-279 chr12 130871787 130871997 + 21.8 0.000 promoter-TSS (NM_001300796) promoter-TSS (NM_001300796) -102 NM_001300796 5901 Hs.10842 NM_006325 ENSG00000132341 RAN ARA24|Gsp1|TC4 RAN, member RAS oncogene family protein-coding chr2-1157 chr2 159903425 159903635 + 21.8 0.000 intron (NM_002349, intron 1 of 34) intron (NM_002349, intron 1 of 34) 1226 NM_002349 4065 Hs.153563 NM_002349 ENSG00000054219 LY75 CD205|CLEC13B|DEC-205|GP200-MR6|LY-75 lymphocyte antigen 75 protein-coding chr17-1024 chr17 47119837 47120047 + 21.8 0.000 non-coding (NR_148340, exon 17 of 17) non-coding (NR_148340, exon 17 of 17) 69353 NR_148340 996 Hs.463295 NM_001256 ENSG00000004897 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding chr1-2068 chr1 23635249 23635459 + 21.8 0.000 intron (NM_001348075, intron 4 of 6) intron (NM_001348075, intron 4 of 6) 8020 NM_001348075 259283 Hs.523369 NM_001348075 MDS2 - myelodysplastic syndrome 2 translocation associated protein-coding chr11-734 chr11 6619382 6619592 + 21.8 0.000 promoter-TSS (NM_000391) promoter-TSS (NM_000391) -65 NM_000391 1200 Hs.523454 NM_000391 ENSG00000166340 TPP1 CLN2|GIG1|LPIC|SCAR7|TPP-1 tripeptidyl peptidase 1 protein-coding chr20-107 chr20 62954065 62954275 + 21.8 0.000 intron (NM_001302643, intron 2 of 13) intron (NM_001302643, intron 2 of 13) 1461 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr9-462 chr9 134458544 134458754 + 21.8 0.000 Intergenic Intergenic 52089 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr14-374 chr14 76152448 76152658 + 21.8 0.000 intron (NM_001322028, intron 1 of 9) intron (NM_001322028, intron 1 of 9) 631 NM_001322030 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr14-584 chr14 51821902 51822112 + 21.8 0.000 Intergenic Intergenic -38605 NM_001243773 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr3-252 chr3 48685738 48685948 + 21.8 0.000 promoter-TSS (NM_184231) promoter-TSS (NM_184231) 72 NM_016453 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr3-429 chr3 52093839 52094049 + 21.8 0.000 intron (NM_001161580, intron 9 of 9) intron (NM_001161580, intron 9 of 9) -28832 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA chr3-512 chr3 10192184 10192394 + 21.8 0.000 intron (NM_001570, intron 2 of 12) intron (NM_001570, intron 2 of 12) 27370 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr1-762 chr1 46520655 46520865 + 21.8 0.000 Intergenic Intergenic 13761 NM_147192 127343 Hs.375623 NM_147192 ENSG00000197587 DMBX1 MBX|OTX3|PAXB diencephalon/mesencephalon homeobox 1 protein-coding chr1-1396 chr1 204972021 204972231 + 21.8 0.000 intron (NM_001160332, intron 11 of 27) intron (NM_001160332, intron 11 of 27) 27900 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr3-1750 chr3 177358418 177358628 + 21.8 0.000 Intergenic Intergenic 64081 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr8-793 chr8 101137382 101137592 + 21.8 0.000 Intergenic Intergenic 68186 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr2-1131 chr2 44715795 44716005 + 21.8 0.000 intron (NM_024766, intron 7 of 10) MER20|DNA|hAT-Charlie 222988 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr18-269 chr18 36352449 36352659 + 21.8 0.000 intron (NM_001281740, intron 1 of 28) intron (NM_001281740, intron 1 of 28) 54841 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr10-863 chr10 132151893 132152103 + 21.8 0.000 intron (NM_001323086, intron 16 of 23) intron (NM_001323086, intron 16 of 23) -34950 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr14-299 chr14 102849456 102849666 + 21.8 0.000 intron (NM_145725, intron 2 of 11) intron (NM_145725, intron 2 of 11) 72082 NM_145726 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr4-554 chr4 60619579 60619789 + 21.8 0.000 Intergenic LTR16|LTR|ERVL -302935 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr8-612 chr8 66507442 66507652 + 21.8 0.000 intron (NM_152765, intron 3 of 5) intron (NM_152765, intron 3 of 5) 13981 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 VXN C8orf46 vexin protein-coding chr10-190 chr10 689585 689795 + 21.8 0.000 promoter-TSS (NM_014974) promoter-TSS (NM_014974) -22 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr10-771 chr10 3227070 3227280 + 21.8 0.000 Intergenic Intergenic -54334 NM_001242307 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding chr14-553 chr14 100372677 100372887 + 21.8 0.000 intron (NM_173701, intron 1 of 10) intron (NM_173701, intron 1 of 10) 2565 NM_004184 7453 Hs.497599 NM_004184 ENSG00000140105 WARS GAMMA-2|HMN9|IFI53|IFP53 tryptophanyl-tRNA synthetase protein-coding chr2-1677 chr2 108678435 108678645 + 21.8 0.000 promoter-TSS (NR_149074) promoter-TSS (NR_149074) 61 NR_149074 106182118 Hs.613268 NR_149074 ENSG00000228763 LIMS1-AS1 - LIMS1 antisense RNA 1 ncRNA chr4-332 chr4 112818096 112818306 + 21.8 0.000 5' UTR (NM_001354277, exon 1 of 41) 5' UTR (NM_001354277, exon 1 of 41) 204 NM_001354257 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr9-305 chr9 35690704 35690914 + 21.8 0.000 promoter-TSS (NM_001301226) promoter-TSS (NM_001301226) -753 NM_003289 7169 Hs.300772 NM_003289 ENSG00000198467 TPM2 AMCD1|DA1|DA2B|DA2B4|HEL-S-273|NEM4|TMSB tropomyosin 2 protein-coding chr7-1344 chr7 41425954 41426164 + 21.8 0.000 Intergenic Intergenic -267860 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr4-431 chr4 139177881 139178091 + 21.8 0.000 promoter-TSS (NM_001371324) promoter-TSS (NM_001371324) -768 NM_001371336 chr10-553 chr10 88271026 88271236 + 21.8 0.000 Intergenic Intergenic 312187 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr16-512 chr16 18790199 18790409 + 21.8 0.000 promoter-TSS (NM_001019) promoter-TSS (NM_001019) 30 NM_001019 6210 Hs.370504 NM_001019 ENSG00000134419 RPS15A DBA20|S15a ribosomal protein S15a protein-coding chr10-604 chr10 68993199 68993409 + 21.8 0.000 intron (NM_015634, intron 1 of 6) intron (NM_015634, intron 1 of 6) 4501 NM_015634 26128 Hs.279580 NM_015634 ENSG00000198954 KIF1BP KBP|KIAA1279|TTC20 KIF1 binding protein protein-coding chr15-828 chr15 98856671 98856881 + 21.8 0.000 intron (NM_000875, intron 2 of 20) L2b|LINE|L2 72350 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr9-687 chr9 76818311 76818521 + 21.8 0.000 intron (NM_001308048, intron 6 of 17) intron (NM_001308048, intron 6 of 17) 53980 NR_132313 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3|PRUNE2-AS1 prostate cancer associated 3 ncRNA chr4-949 chr4 143288178 143288388 + 21.8 0.000 Intergenic Intergenic -48593 NM_002039 2549 Hs.80720 NM_002039 ENSG00000109458 GAB1 DFNB26 GRB2 associated binding protein 1 protein-coding chr6-287 chr6 17962446 17962656 + 21.8 0.000 intron (NM_001243423, intron 2 of 2) intron (NM_001243423, intron 2 of 2) 25084 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr5-934 chr5 33370174 33370384 + 21.8 0.000 Intergenic Intergenic -70417 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr1-1094 chr1 93701738 93701948 + 21.8 0.000 intron (NM_001261408, intron 3 of 13) intron (NM_001261408, intron 3 of 13) -20006 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr2-1033 chr2 36539570 36539780 + 21.8 0.000 intron (NM_016441, intron 14 of 16) L2a|LINE|L2 58493 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr2-605 chr2 85538779 85538989 + 21.8 0.000 promoter-TSS (NR_038942) promoter-TSS (NR_038942) 2 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr2-1095 chr2 10330254 10330464 + 21.8 0.000 intron (NM_001258357, intron 1 of 4) intron (NM_001258357, intron 1 of 4) 196 NM_001258357 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr1-1139 chr1 218706179 218706389 + 21.8 0.000 intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 196189 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr19-644 chr19 2977311 2977521 + 21.8 0.000 promoter-TSS (NM_024760) promoter-TSS (NM_024760) -148 NM_024760 79816 Hs.334507 NM_024760 ENSG00000104953 TLE6 GRG6|PREMBL TLE family member 6, subcortical maternal complex member protein-coding chr20-375 chr20 1392883 1393093 + 21.8 0.000 promoter-TSS (NM_000801) promoter-TSS (NM_000801) -27 NR_106929 102465524 NR_106929 ENSG00000284436 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA chr6-489 chr6 17885044 17885254 + 21.8 0.000 intron (NM_001105567, intron 3 of 36) intron (NM_001105567, intron 3 of 36) 102486 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr1-1246 chr1 153627257 153627467 + 21.8 0.000 promoter-TSS (NM_001024213) promoter-TSS (NM_001024213) -94 NM_001024212 6284 Hs.516505 NM_005979 ENSG00000189171 S100A13 - S100 calcium binding protein A13 protein-coding chr5-723 chr5 132439713 132439923 + 21.8 0.000 intron (NR_161242, intron 2 of 3) intron (NR_161242, intron 2 of 3) 28889 NR_161242 441108 Hs.658288 NM_001013717 C5orf56 - chromosome 5 open reading frame 56 ncRNA chr1-1517 chr1 36299994 36300204 + 21.8 0.000 intron (NM_001321471, intron 10 of 12) intron (NM_001321471, intron 10 of 12) -6269 NM_001162530 79729 Hs.524496 NM_024676 ENSG00000214193 SH3D21 C1orf113 SH3 domain containing 21 protein-coding chr2-1216 chr2 234881700 234881910 + 21.8 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -70212 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr3-875 chr3 184040043 184040253 + 21.8 0.000 TTS (NM_182537) TTS (NM_182537) 7317 NM_001163646 200909 Hs.448004 NM_182537 ENSG00000186090 HTR3D 5HT3D 5-hydroxytryptamine receptor 3D protein-coding chr19-527 chr19 51594392 51594602 + 21.8 0.000 promoter-TSS (NR_034159) promoter-TSS (NR_034159) -117 NR_034159 729975 Hs.716785 NR_034159 LINC01530 - long intergenic non-protein coding RNA 1530 ncRNA chr2-699 chr2 241271818 241272028 + 21.7 0.000 promoter-TSS (NM_001320966) promoter-TSS (NM_001320966) 42 NM_001320966 3069 Hs.471851 NM_005336 ENSG00000115677 HDLBP HBP|PRO2900|VGL high density lipoprotein binding protein protein-coding chr5-613 chr5 60633466 60633676 + 21.7 0.000 intron (NM_001145208, intron 7 of 9) MLT1H|LTR|ERVL-MaLR 66595 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr7-682 chr7 128828302 128828512 + 21.7 0.000 Intergenic Intergenic -1999 NM_001127487 2318 Hs.58414 NM_001458 ENSG00000128591 FLNC ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5 filamin C protein-coding chr9-731 chr9 125631456 125631666 + 21.7 0.000 intron (NM_001006619, intron 4 of 10) intron (NM_001006619, intron 4 of 10) 75647 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr1-1131 chr1 165828934 165829144 + 21.7 0.000 intron (NM_012474, intron 1 of 6) intron (NM_012474, intron 1 of 6) 1425 NM_001363568 7371 Hs.458360 NM_012474 ENSG00000143179 UCK2 TSA903|UK|UMPK uridine-cytidine kinase 2 protein-coding chr18-252 chr18 11269469 11269679 + 21.7 0.000 Intergenic Intergenic -120812 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr17-401 chr17 7857093 7857303 + 21.7 0.000 promoter-TSS (NM_144607) promoter-TSS (NM_144607) 693 NM_001320925 84316 Hs.565094 NM_032356 ENSG00000183011 NAA38 LSMD1|MAK31|PFAAP2 N(alpha)-acetyltransferase 38, NatC auxiliary subunit protein-coding chr4-560 chr4 88107436 88107646 + 21.7 0.000 intron (NM_001257386, intron 9 of 15) intron (NM_001257386, intron 9 of 15) 51098 NM_004827 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr17-295 chr17 30292053 30292263 + 21.7 0.000 promoter-TSS (NM_000386) promoter-TSS (NM_000386) -214 NM_000386 642 Hs.371914 NM_000386 ENSG00000108578 BLMH BH|BMH bleomycin hydrolase protein-coding chr12-696 chr12 12808719 12808929 + 21.7 0.000 Intergenic Intergenic -4522 NM_016355 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chrX-486 chrX 133646500 133646710 + 21.7 0.000 intron (NM_001164619, intron 5 of 6) intron (NM_001164619, intron 5 of 6) -231116 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr4-1116 chr4 56937314 56937524 + 21.7 0.000 Intergenic Intergenic 28506 NM_001193508 5978 Hs.307836 NM_005612 ENSG00000084093 REST DFNA27|GINGF5|HGF5|NRSF|WT6|XBR RE1 silencing transcription factor protein-coding chr8-830 chr8 61689701 61689911 + 21.7 0.000 promoter-TSS (NM_032467) promoter-TSS (NM_032467) 5 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr21-45 chr21 15064779 15064989 + 21.7 0.000 5' UTR (NM_003489, exon 1 of 4) 5' UTR (NM_003489, exon 1 of 4) 116 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr19-839 chr19 18847170 18847380 + 21.7 0.000 intron (NM_002911, intron 2 of 23) intron (NM_002911, intron 2 of 23) 15316 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr19-611 chr19 36666802 36667012 + 21.7 0.000 promoter-TSS (NM_001322826) promoter-TSS (NM_001322826) -70 NM_001322823 92283 Hs.590972 NM_153257 ENSG00000197808 ZNF461 GIOT-1|GIOT1|HZF28 zinc finger protein 461 protein-coding chr3-1352 chr3 171527040 171527250 + 21.7 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -66737 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr3-1124 chr3 177973605 177973815 + 21.7 0.000 Intergenic MamRep605|LTR?|LTR? 156845 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr10-432 chr10 73810766 73810976 + 21.7 0.000 non-coding (NR_160743, exon 2 of 15) non-coding (NR_160743, exon 2 of 15) 727 NM_001330107 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr1-604 chr1 202958233 202958443 + 21.7 0.000 promoter-TSS (NM_015999) promoter-TSS (NM_015999) -26 NM_015999 51094 Hs.5298 NM_015999 ENSG00000159346 ADIPOR1 ACDCR1|CGI-45|CGI45|PAQR1|TESBP1A adiponectin receptor 1 protein-coding chr13-330 chr13 84121497 84121707 + 21.7 0.000 Intergenic MER90|LTR|ERV1 -19000 NR_046871 100874128 Hs.578060 NR_046871 LINC00333 NCRNA00333 long intergenic non-protein coding RNA 333 ncRNA chr12-356 chr12 49869575 49869785 + 21.7 0.000 3' UTR (NM_012306, exon 12 of 12) 3' UTR (NM_012306, exon 12 of 12) -26574 NM_181708 144233 Hs.142736 NM_181708 ENSG00000186666 BCDIN3D - BCDIN3 domain containing RNA methyltransferase protein-coding chr1-992 chr1 235067664 235067874 + 21.7 0.000 non-coding (NR_027454, exon 3 of 4) non-coding (NR_027454, exon 3 of 4) 2049 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA chr6-353 chr6 11766628 11766838 + 21.7 0.000 intron (NM_032744, intron 2 of 5) intron (NM_032744, intron 2 of 5) 12314 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr21-149 chr21 43908131 43908341 + 21.7 0.000 intron (NM_001369881, intron 2 of 9) intron (NM_001369881, intron 2 of 9) -8552 NM_001369880 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr3-857 chr3 56624941 56625151 + 21.7 0.000 intron (NM_001365638, intron 20 of 22) intron (NM_001365638, intron 20 of 22) 39000 NM_015224 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chr15-684 chr15 92020848 92021058 + 21.7 0.000 intron (NR_135775, intron 2 of 10) MIRb|SINE|MIR 166649 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr11-623 chr11 68013170 68013380 + 21.7 0.000 intron (NM_001030010, intron 1 of 8) intron (NM_001030010, intron 1 of 8) 2948 NM_001290059 221 Hs.523841 NM_000694 ENSG00000006534 ALDH3B1 ALDH4|ALDH7 aldehyde dehydrogenase 3 family member B1 protein-coding chr20-865 chr20 3995589 3995799 + 21.7 0.000 intron (NM_001134338, intron 1 of 6) intron (NM_001134338, intron 1 of 6) 19864 NM_001134338 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr9-721 chr9 69122355 69122565 + 21.7 0.000 promoter-TSS (NM_001369871) promoter-TSS (NM_001369871) -555 NM_001369871 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr19-1455 chr19 30036232 30036442 + 21.7 0.000 Intergenic L1MC1|LINE|L1 94098 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr10-596 chr10 3095334 3095544 + 21.7 0.000 intron (NM_001242339, intron 3 of 23) MARNA|DNA|TcMar-Mariner -9170 NM_001323070 5214 Hs.26010 NM_002627 ENSG00000067057 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding chr8-656 chr8 133566190 133566400 + 21.7 0.000 intron (NM_003033, intron 1 of 8) intron (NM_003033, intron 1 of 8) 5592 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr4-561 chr4 96736576 96736786 + 21.7 0.000 intron (NR_147149, intron 3 of 3) L1MEc|LINE|L1 425978 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr10-834 chr10 114505337 114505547 + 21.7 0.000 intron (NM_001352440, intron 6 of 20) intron (NM_001352440, intron 6 of 20) 21471 NM_001322888 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr12-769 chr12 111557366 111557576 + 21.7 0.000 intron (NM_001310121, intron 1 of 25) intron (NM_001310121, intron 1 of 25) 41844 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr10-384 chr10 988220 988430 + 21.7 0.000 promoter-TSS (NM_012341) promoter-TSS (NM_012341) -109 NM_012341 23560 Hs.215766 NM_012341 ENSG00000107937 GTPBP4 CRFG|NGB|NOG1 GTP binding protein 4 protein-coding chr11-1008 chr11 24422467 24422677 + 21.7 0.000 Intergenic L1ME1|LINE|L1 -74481 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chrX-246 chrX 109827473 109827683 + 21.7 0.000 Intergenic Intergenic -42823 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr15-308 chr15 67121217 67121427 + 21.7 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -4394 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr6-354 chr6 16351614 16351824 + 21.7 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 113132 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr19-823 chr19 1065070 1065280 + 21.7 0.000 promoter-TSS (NM_001258328) promoter-TSS (NM_001258328) -784 NM_001258328 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chrX-70 chrX 154097732 154097942 + 21.7 0.000 promoter-TSS (NM_001316337) promoter-TSS (NM_001316337) -106 NM_004992 4204 Hs.200716 NM_004992 ENSG00000169057 MECP2 AUTSX3|MRX16|MRX79|MRXS13|MRXSL|PPMX|RS|RTS|RTT methyl-CpG binding protein 2 protein-coding chr2-1421 chr2 171272001 171272211 + 21.7 0.000 Intergenic Intergenic -40813 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr8-340 chr8 132775117 132775327 + 21.7 0.000 promoter-TSS (NM_016018) promoter-TSS (NM_016018) -136 NM_198513 51105 Hs.304362 NM_016018 ENSG00000129292 PHF20L1 CGI-72|TDRD20B|URLC1 PHD finger protein 20 like 1 protein-coding chr4-95 chr4 1684306 1684516 + 21.7 0.000 promoter-TSS (NM_001013622) promoter-TSS (NM_001013622) -98 NM_001174070 152877 Hs.143314 NM_001013622 ENSG00000174137 FAM53A DNTNP family with sequence similarity 53 member A protein-coding chr7-784 chr7 151436941 151437151 + 21.7 0.000 intron (NM_144727, intron 2 of 3) intron (NM_144727, intron 2 of 3) 3124 NM_001308292 155051 Hs.647104 NM_144727 ENSG00000127377 CRYGN - crystallin gamma N protein-coding chr2-450 chr2 55269095 55269305 + 21.7 0.000 promoter-TSS (NM_001321002) promoter-TSS (NM_001321002) -21 NM_001005369 4528 Hs.149894 NM_002453 ENSG00000085760 MTIF2 - mitochondrial translational initiation factor 2 protein-coding chr11-641 chr11 64688427 64688637 + 21.7 0.000 intron (NM_138732, intron 4 of 19) intron (NM_138732, intron 4 of 19) 34656 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr8-281 chr8 19818019 19818229 + 21.7 0.000 intron (NR_148458, intron 1 of 18) intron (NR_148458, intron 1 of 18) 708 NM_018142 55174 Hs.512627 NM_018142 ENSG00000104613 INTS10 C8orf35|INT10 integrator complex subunit 10 protein-coding chr19-1126 chr19 1381635 1381845 + 21.7 0.000 Intergenic L1MC3|LINE|L1 -2167 NM_001363602 374291 Hs.211914 NM_024407 ENSG00000115286 NDUFS7 CI-20|CI-20KD|MC1DN3|MY017|PSST NADH:ubiquinone oxidoreductase core subunit S7 protein-coding chr14-292 chr14 22546571 22546781 + 21.7 0.000 Intergenic Intergenic 10386 NR_146543 105370400 NR_146543 ENSG00000259054 LINC02332 - long intergenic non-protein coding RNA 2332 ncRNA chr3-1054 chr3 10522206 10522416 + 21.7 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) -16725 NM_001683 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr7-777 chr7 76291634 76291844 + 21.7 0.000 Intergenic X9_LINE|LINE|L1 -10934 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr19-1216 chr19 5586576 5586786 + 21.7 0.000 TTS (NM_014649) TTS (NM_014649) -18647 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr11-1006 chr11 12207478 12207688 + 21.7 0.000 intron (NR_144420, intron 4 of 27) intron (NR_144420, intron 4 of 27) 43900 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr3-713 chr3 186021709 186021919 + 21.7 0.000 Intergenic Intergenic 61871 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr6-312 chr6 43851324 43851534 + 21.7 0.000 intron (NR_149142, intron 1 of 3) intron (NR_149142, intron 1 of 3) 904 NR_149142 285857 Hs.582798 NR_149142 ENSG00000283215 LINC02537 - long intergenic non-protein coding RNA 2537 ncRNA chr2-1211 chr2 222879426 222879636 + 21.7 0.000 intron (NM_001354159, intron 1 of 14) intron (NM_001354159, intron 1 of 14) 18495 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr10-824 chr10 100185276 100185486 + 21.7 0.000 intron (NR_144760, intron 2 of 10) intron (NR_144760, intron 2 of 10) 648 NM_001347860 10613 Hs.150087 NM_006459 ENSG00000107566 ERLIN1 C10orf69|Erlin-1|KE04|KEO4|SPFH1|SPG62 ER lipid raft associated 1 protein-coding chr14-337 chr14 96095861 96096071 + 21.7 0.000 Intergenic Intergenic 56604 NM_001282463 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr1-1144 chr1 244969658 244969868 + 21.7 0.000 promoter-TSS (NR_026587) promoter-TSS (NR_026587) -106 NM_032328 84288 Hs.134857 NM_032328 ENSG00000203666 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding chr5-1715 chr5 136730089 136730299 + 21.7 0.000 Intergenic Intergenic -364718 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr12-733 chr12 108721225 108721435 + 21.7 0.000 intron (NM_014325, intron 1 of 10) intron (NM_014325, intron 1 of 10) 9513 NM_001276471 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr17-1088 chr17 47005186 47005396 + 21.7 0.000 Intergenic Intergenic -26038 NM_203400 388394 Hs.367999 NM_203400 ENSG00000179673 RPRML - reprimo like protein-coding chr6-307 chr6 160030250 160030460 + 21.7 0.000 intron (NM_000876, intron 7 of 47) intron (NM_000876, intron 7 of 47) -22691 NR_047511 100271873 Hs.742166 NR_047511 ENSG00000268257 AIRN AIR|IGF2R-AS|IGF2R-AS1|IGF2RAS|NCRNA00088 antisense of IGF2R non-protein coding RNA ncRNA chr6-707 chr6 45454331 45454541 + 21.7 0.000 intron (NM_001015051, intron 5 of 7) intron (NM_001015051, intron 5 of 7) 32161 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr7-1030 chr7 46682906 46683116 + 21.7 0.000 Intergenic Intergenic 14111 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr8-338 chr8 104223202 104223412 + 21.7 0.000 promoter-TSS (NM_001282882) promoter-TSS (NM_001282882) -28 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr17-804 chr17 78920406 78920616 + 21.7 0.000 intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 4876 NM_003255 7077 Hs.633514 NM_003255 ENSG00000035862 TIMP2 CSC-21K|DDC8 TIMP metallopeptidase inhibitor 2 protein-coding chr4-546 chr4 168865350 168865560 + 21.7 0.000 intron (NM_001367567, intron 1 of 11) intron (NM_001367567, intron 1 of 11) 33360 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr4-496 chr4 15681597 15681807 + 21.7 0.000 promoter-TSS (NM_001145191) promoter-TSS (NM_001145191) -125 NM_001145191 285550 Hs.399980 NM_001145191 ENSG00000237765 FAM200B C4orf53 family with sequence similarity 200 member B protein-coding chr11-442 chr11 73876704 73876914 + 21.7 0.000 promoter-TSS (NM_025155) promoter-TSS (NM_025155) 37 NM_016565 51287 Hs.475387 NM_016565 ENSG00000181924 COA4 CHCHD8|CMC3|E2IG2 cytochrome c oxidase assembly factor 4 homolog protein-coding chr12-256 chr12 79934998 79935208 + 21.7 0.000 promoter-TSS (NM_001244992) promoter-TSS (NM_001244992) -6 NM_002480 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr12-1438 chr12 84632580 84632790 + 21.7 0.000 Intergenic Intergenic 280114 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr2-244 chr2 240832298 240832508 + 21.7 0.000 Intergenic CpG -12095 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr7-650 chr7 80722777 80722987 + 21.7 0.000 Intergenic Intergenic 76229 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr22-712 chr22 19463539 19463749 + 21.7 0.000 intron (NM_001035247, intron 6 of 11) intron (NM_001035247, intron 6 of 11) -15412 NM_001166242 128977 Hs.659565 NM_173793 ENSG00000242259 C22orf39 - chromosome 22 open reading frame 39 protein-coding chr11-1130 chr11 65078260 65078470 + 21.7 0.000 3' UTR (NM_080668, exon 6 of 6) 3' UTR (NM_080668, exon 6 of 6) 5675 NM_080668 113130 Hs.434886 NM_080668 ENSG00000146670 CDCA5 SORORIN cell division cycle associated 5 protein-coding chr8-300 chr8 22604533 22604743 + 21.7 0.000 promoter-TSS (NR_033902) promoter-TSS (NR_033902) -119 NR_033902 57805 Hs.744848 NM_021174 ENSG00000158941 CCAR2 DBC-1|DBC1|KIAA1967|NET35|p30 DBC|p30DBC cell cycle and apoptosis regulator 2 protein-coding chr7-909 chr7 108079718 108079928 + 21.7 0.000 intron (NM_001318048, intron 14 of 17) intron (NM_001318048, intron 14 of 17) 50538 NM_001318047 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr9-385 chr9 136118160 136118370 + 21.7 0.000 5' UTR (NM_001256526, exon 1 of 2) 5' UTR (NM_001256526, exon 1 of 2) 166 NM_001256526 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr7-1442 chr7 55140716 55140926 + 21.7 0.000 intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 30982 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr5-403 chr5 171596474 171596684 + 21.7 0.000 Intergenic Intergenic 176932 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr15-232 chr15 64823951 64824161 + 21.7 0.000 exon (NM_001286497, exon 2 of 13) exon (NM_001286497, exon 2 of 13) 1591 NM_025049 80119 Hs.112160 NM_025049 ENSG00000140451 PIF1 C15orf20|PIF PIF1 5'-to-3' DNA helicase protein-coding chr17-827 chr17 59825649 59825859 + 21.7 0.000 intron (NM_001329400, intron 8 of 9) intron (NM_001329400, intron 8 of 9) -15512 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr11-1503 chr11 64121680 64121890 + 21.7 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) 17895 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr3-1435 chr3 13451899 13452109 + 21.7 0.000 Intergenic MER66A|LTR|ERV1 28049 NR_046690 100874101 Hs.535701 NR_046690 ENSG00000244502 HDAC11-AS1 - HDAC11 antisense RNA 1 ncRNA chr10-1609 chr10 61271558 61271768 + 21.7 0.000 Intergenic L1M8|LINE|L1 -180976 NR_120643 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr1-2238 chr1 164780927 164781137 + 21.7 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) -6391 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr16-938 chr16 53665061 53665271 + 21.7 0.000 intron (NM_001127897, intron 9 of 24) intron (NM_001127897, intron 9 of 24) 38693 NM_001328422 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding chr11-863 chr11 113675194 113675404 + 21.7 0.000 Intergenic Intergenic 31009 NM_001288752 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding chr13-184 chr13 112931618 112931828 + 21.7 0.000 Intergenic L1MC3|LINE|L1 36915 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr6-341 chr6 4059187 4059397 + 21.7 0.000 intron (NR_146785, intron 14 of 20) intron (NR_146785, intron 14 of 20) 19845 NM_173563 222826 Hs.657342 NM_173563 ENSG00000145975 FAM217A C6orf146 family with sequence similarity 217 member A protein-coding chr1-1294 chr1 1859135 1859345 + 21.7 0.000 intron (NM_001282538, intron 1 of 9) AluSz|SINE|Alu 31847 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr2-1634 chr2 17107158 17107368 + 21.7 0.000 Intergenic MamRep1527|LTR|LTR 411177 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr1-2945 chr1 65509962 65510172 + 21.7 0.000 intron (NM_001003679, intron 2 of 19) intron (NM_001003679, intron 2 of 19) -15584 NM_001198687 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr2-1063 chr2 218284462 218284672 + 21.7 0.000 intron (NM_001321433, intron 1 of 12) intron (NM_001321433, intron 1 of 12) 2282 NM_001321427 64114 Hs.591605 NM_022152 ENSG00000135926 TMBIM1 LFG3|MST100|MSTP100|PP1201|RECS1 transmembrane BAX inhibitor motif containing 1 protein-coding chr17-711 chr17 63460917 63461127 + 21.7 0.000 Intergenic Intergenic -14716 NM_001915 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr6-682 chr6 158863746 158863956 + 21.7 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -5963 NR_160977 100130967 Hs.32804 NM_001195032 C6orf99 - chromosome 6 open reading frame 99 ncRNA chr9-1278 chr9 5510384 5510594 + 21.7 0.000 promoter-TSS (NM_025239) promoter-TSS (NM_025239) -42 NM_025239 80380 Hs.532279 NM_025239 ENSG00000197646 PDCD1LG2 B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2 programmed cell death 1 ligand 2 protein-coding chr2-1837 chr2 176001249 176001459 + 21.7 0.000 intron (NR_130941, intron 1 of 14) intron (NR_130941, intron 1 of 14) 913 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr1-1824 chr1 231395359 231395569 + 21.7 0.000 intron (NM_022051, intron 1 of 4) MER119|DNA|hAT-Charlie 29580 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr14-1119 chr14 80425614 80425824 + 21.7 0.000 intron (NR_038355, intron 8 of 8) MER44D|DNA|TcMar-Tigger -194662 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr17-1310 chr17 66433322 66433532 + 21.7 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -16573 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr9-711 chr9 130220605 130220815 + 21.7 0.000 intron (NM_014286, intron 4 of 7) intron (NM_014286, intron 4 of 7) 20310 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr15-596 chr15 99703719 99703929 + 21.7 0.000 intron (NM_001319206, intron 9 of 11) intron (NM_001319206, intron 9 of 11) 29613 NM_001284419 145748 Hs.562568 NM_152449 ENSG00000183060 LYSMD4 - LysM domain containing 4 protein-coding chr3-506 chr3 120432338 120432548 + 21.7 0.000 intron (NM_007085, intron 2 of 10) intron (NM_007085, intron 2 of 10) 18549 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr9-1025 chr9 122402409 122402619 + 21.7 0.000 Intergenic Intergenic 27212 NM_001271165 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr19-739 chr19 12722563 12722773 + 21.7 0.000 promoter-TSS (NM_001136196) promoter-TSS (NM_001136196) -108 NM_001136196 30000 Hs.416049 NM_013433 ENSG00000105576 TNPO2 IPO3|KPNB2B|TRN2 transportin 2 protein-coding chr20-125 chr20 33663694 33663904 + 21.7 0.000 exon (NM_080825, exon 2 of 2) exon (NM_080825, exon 2 of 2) 1472 NM_080825 128864 Hs.324104 NM_080825 ENSG00000149609 C20orf144 dJ63M2.6 chromosome 20 open reading frame 144 protein-coding chr9-935 chr9 83281649 83281859 + 21.7 0.000 intron (NM_001244960, intron 13 of 13) intron (NM_001244960, intron 13 of 13) -14486 NM_001244962 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr17-1698 chr17 29049721 29049931 + 21.7 0.000 intron (NM_016518, intron 2 of 7) intron (NM_016518, intron 2 of 7) 6685 NM_016518 51268 Hs.462585 NM_016518 ENSG00000179761 PIPOX LPIPOX pipecolic acid and sarcosine oxidase protein-coding chrX-94 chrX 47836548 47836758 + 21.7 0.000 promoter-TSS (NM_007137) promoter-TSS (NM_007137) -249 NM_007137 347344 Hs.114246 NM_007137 ENSG00000197779 ZNF81 HFZ20|MRX45|dJ54B20.6 zinc finger protein 81 protein-coding chr15-448 chr15 84142854 84143064 + 21.7 0.000 Intergenic Intergenic 28025 NR_033787 440299 Hs.454641 NR_033787 DNM1P41 DNM1DN11-6|DNM1DN11.6|DNM1DN11@ dynamin 1 pseudogene 41 pseudo chr17-1161 chr17 21323020 21323230 + 21.7 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 35089 NM_002756 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr2-938 chr2 200962980 200963190 + 21.7 0.000 intron (NR_033915, intron 1 of 16) intron (NR_033915, intron 1 of 16) 575 NM_006190 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr6-517 chr6 150352388 150352598 + 21.7 0.000 Intergenic LTR8B|LTR|ERV1 -16519 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr17-736 chr17 76709470 76709680 + 21.7 0.000 promoter-TSS (NR_130926) promoter-TSS (NR_130926) 22 NR_130926 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr12-1380 chr12 75480535 75480745 + 21.7 0.000 promoter-TSS (NM_006851) promoter-TSS (NM_006851) -115 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr2-862 chr2 172465654 172465864 + 21.7 0.000 intron (NM_001365530, intron 2 of 25) intron (NM_001365530, intron 2 of 25) 263 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr12-584 chr12 121799458 121799668 + 21.7 0.000 intron (NR_152740, intron 3 of 3) intron (NR_152740, intron 3 of 3) 3383 NR_152735 338799 Hs.524804 NR_002809 ENSG00000212694 LINC01089 LIMT long intergenic non-protein coding RNA 1089 ncRNA chr12-482 chr12 3076933 3077143 + 21.7 0.000 promoter-TSS (NM_006675) promoter-TSS (NM_006675) -317 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr1-1527 chr1 88327804 88328014 + 21.6 0.000 Intergenic Intergenic -356235 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr3-830 chr3 161104548 161104758 + 21.6 0.000 promoter-TSS (NM_001349161) promoter-TSS (NM_001349161) 79 NM_001349161 8706 Hs.418062 NM_003781 ENSG00000169255 B3GALNT1 B3GALT3|GLCT3|GLOB|Gb4Cer|P|P1|beta3Gal-T3|galT3 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) protein-coding chr2-464 chr2 28870294 28870504 + 21.6 0.000 promoter-TSS (NM_017910) promoter-TSS (NM_017910) -90 NM_017910 55006 Hs.468026 NM_017910 ENSG00000171103 TRMT61B - tRNA methyltransferase 61B protein-coding chr10-802 chr10 31098056 31098266 + 21.6 0.000 Intergenic Intergenic -66224 NM_001143768 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr17-542 chr17 67366423 67366633 + 21.6 0.000 promoter-TSS (NM_001316341) promoter-TSS (NM_001316341) 49 NM_174871 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr1-1709 chr1 10472322 10472532 + 21.6 0.000 exon (NM_004401, exon 1 of 6) exon (NM_004401, exon 1 of 6) 102 NM_213566 1676 Hs.484782 NM_004401 ENSG00000160049 DFFA DFF-45|DFF1|ICAD DNA fragmentation factor subunit alpha protein-coding chr10-765 chr10 113362740 113362950 + 21.6 0.000 Intergenic Intergenic -187986 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr22-379 chr22 42074336 42074546 + 21.6 0.000 intron (NM_001002034, intron 1 of 2) CpG 193 NM_001002034 150368 Hs.368312 NM_001002034 ENSG00000177096 PHETA2 FAM109B|IPIP27B|Ses2 PH domain containing endocytic trafficking adaptor 2 protein-coding chr3-178 chr3 132722395 132722605 + 21.6 0.000 promoter-TSS (NM_153240) promoter-TSS (NM_153240) -41 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr9-565 chr9 124811027 124811237 + 21.6 0.000 3' UTR (NM_001282715, exon 5 of 5) 3' UTR (NM_001282715, exon 5 of 5) 10258 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr4-239 chr4 55546948 55547158 + 21.6 0.000 promoter-TSS (NM_004898) promoter-TSS (NM_004898) -144 NM_004898 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr10-707 chr10 90960519 90960729 + 21.6 0.000 intron (NR_131214, intron 3 of 5) ERVL-B4-int|LTR|ERVL 13324 NR_131214 105378427 NR_131214 XLOC_008559 - uncharacterized LOC105378427 ncRNA chr1-1009 chr1 109151162 109151372 + 21.6 0.000 intron (NM_001284352, intron 1 of 20) intron (NM_001284352, intron 1 of 20) -35282 NM_001284353 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding chr17-841 chr17 82802172 82802382 + 21.6 0.000 intron (NM_005993, intron 9 of 38) intron (NM_005993, intron 9 of 38) 37745 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr3-2179 chr3 188067983 188068193 + 21.6 0.000 Intergenic L2c|LINE|L2 -85810 NM_001167672 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr3-1032 chr3 157064048 157064258 + 21.6 0.000 Intergenic Intergenic -17688 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA chr8-465 chr8 22484768 22484978 + 21.6 0.000 intron (NM_005605, intron 3 of 13) intron (NM_005605, intron 3 of 13) 43903 NM_001243975 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr17-1195 chr17 72684081 72684291 + 21.6 0.000 intron (NM_001352692, intron 7 of 9) intron (NM_001352692, intron 7 of 9) -43714 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr9-896 chr9 133982436 133982646 + 21.6 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 9783 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr17-799 chr17 50178314 50178524 + 21.6 0.000 Intergenic Intergenic -5943 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr3-979 chr3 153284405 153284615 + 21.6 0.000 Intergenic Intergenic 122284 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr14-169 chr14 32076710 32076920 + 21.6 0.000 promoter-TSS (NR_027263) promoter-TSS (NR_027263) -116 NR_027263 84837 Hs.496755 NM_032751 ARHGAP5-AS1 C14orf128 ARHGAP5 antisense RNA 1 (head to head) ncRNA chr9-673 chr9 129627068 129627278 + 21.6 0.000 intron (NM_001286799, intron 1 of 3) intron (NM_001286799, intron 1 of 3) 729 NM_001286799 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr16-1044 chr16 71708068 71708278 + 21.6 0.000 intron (NM_015020, intron 2 of 18) HERVH-int|LTR|ERV1 7667 NM_001289003 23035 Hs.709458 NM_015020 ENSG00000040199 PHLPP2 PHLPPL|PPM3B PH domain and leucine rich repeat protein phosphatase 2 protein-coding chr7-1242 chr7 158651049 158651259 + 21.6 0.000 intron (NM_001281932, intron 24 of 28) intron (NM_001281932, intron 24 of 28) 53650 NM_017760 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr17-869 chr17 81675900 81676110 + 21.6 0.000 Intergenic LTR13|LTR|ERVK 7708 NR_138059 339231 Hs.658789 NM_001040025 ENSG00000214087 ARL16 - ADP ribosylation factor like GTPase 16 protein-coding chr22-648 chr22 32897573 32897783 + 21.6 0.000 intron (NM_003490, intron 4 of 13) MIR|SINE|MIR 96862 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr8-375 chr8 65973962 65974172 + 21.6 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -40911 NM_001349432 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr7-1254 chr7 38321619 38321829 + 21.6 0.000 Intergenic MIR3|SINE|MIR -19853 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr17-1140 chr17 76398010 76398220 + 21.6 0.000 intron (NM_022066, intron 12 of 17) intron (NM_022066, intron 12 of 17) 12837 NM_001142602 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr16-1146 chr16 89793278 89793488 + 21.6 0.000 intron (NM_000135, intron 11 of 42) LTR13|LTR|ERVK 23264 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr12-601 chr12 124915137 124915347 + 21.6 0.000 promoter-TSS (NR_049820) promoter-TSS (NR_049820) -305 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr11-1211 chr11 5369927 5370137 + 21.6 0.000 intron (NM_001005567, intron 1 of 4) intron (NM_001005567, intron 1 of 4) 18524 NM_001004750 390058 Hs.553730 NM_001004750 ENSG00000176239 OR51B6 HOR5'Beta6 olfactory receptor family 51 subfamily B member 6 protein-coding chr1-649 chr1 27575589 27575799 + 21.6 0.000 intron (NM_001029882, intron 1 of 6) CpG 27800 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr6-423 chr6 169070579 169070789 + 21.6 0.000 Intergenic Intergenic 2898 NR_134619 102724357 Hs.129310 NR_134619 ENSG00000234519 LOC102724357 - uncharacterized LOC102724357 ncRNA chr11-975 chr11 65376256 65376466 + 21.6 0.000 non-coding (NR_147973, exon 8 of 8) non-coding (NR_147973, exon 8 of 8) 5610 NM_001352381 283130 Hs.661604 NM_182556 ENSG00000162241 SLC25A45 - solute carrier family 25 member 45 protein-coding chr22-606 chr22 41781425 41781635 + 21.6 0.000 intron (NM_152513, intron 23 of 30) MIR3|SINE|MIR -19092 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr5-775 chr5 113141292 113141502 + 21.6 0.000 intron (NM_001085377, intron 5 of 18) MLT2B3|LTR|ERVL 153541 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr11-926 chr11 20087235 20087445 + 21.6 0.000 intron (NM_182964, intron 26 of 37) intron (NM_182964, intron 26 of 37) -38037 NR_046672 100874014 Hs.557916 NR_046672 ENSG00000254453 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA chr5-746 chr5 14218980 14219190 + 21.6 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 75743 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr9-958 chr9 87599880 87600090 + 21.6 0.000 intron (NM_004938, intron 2 of 25) Tigger17a|DNA|TcMar-Tigger 46531 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr5-547 chr5 9182893 9183103 + 21.6 0.000 intron (NM_003966, intron 11 of 22) intron (NM_003966, intron 11 of 22) -129103 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr7-824 chr7 43536002 43536212 + 21.6 0.000 intron (NM_001287059, intron 22 of 27) intron (NM_001287059, intron 22 of 27) -13565 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr2-747 chr2 106197987 106198197 + 21.6 0.000 Intergenic Intergenic -3753 NM_001253875 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr2-791 chr2 216114834 216115044 + 21.6 0.000 intron (NM_021141, intron 2 of 20) MER50C|LTR|ERV1 5591 NM_021141 7520 Hs.388739 NM_021141 ENSG00000079246 XRCC5 KARP-1|KARP1|KU80|KUB2|Ku86|NFIV X-ray repair cross complementing 5 protein-coding chr2-1106 chr2 109173655 109173865 + 21.6 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -32172 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr5-769 chr5 51495873 51496083 + 21.6 0.000 Intergenic Intergenic 112530 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding chr2-879 chr2 20450733 20450943 + 21.6 0.000 Intergenic Intergenic 3764 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr1-969 chr1 31644922 31645132 + 21.6 0.000 promoter-TSS (NM_001359651) promoter-TSS (NM_001359651) -151 NM_012392 553115 Hs.470417 NM_012392 ENSG00000162517 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding chr2-1109 chr2 134260788 134260998 + 21.6 0.000 intron (NM_001371457, intron 2 of 16) intron (NM_001371457, intron 2 of 16) 6821 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chrX-207 chrX 23883941 23884151 + 21.6 0.000 intron (NM_024122, intron 1 of 8) L2c|LINE|L2 23892 NR_026545 79135 Hs.495851 NM_024122 ENSG00000184831 APOO FAM121B|MIC26|MICOS26|Mic23|My025 apolipoprotein O protein-coding chr7-790 chr7 34096327 34096537 + 21.6 0.000 intron (NM_133468, intron 14 of 15) intron (NM_133468, intron 14 of 15) 190893 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr15-248 chr15 82122821 82123031 + 21.6 0.000 Intergenic MER5A|DNA|hAT-Charlie 34332 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr11-1424 chr11 58829845 58830055 + 21.6 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 14754 NM_145016 219970 Hs.254271 NM_145016 ENSG00000156689 GLYATL2 BXMAS2-10|GATF-B glycine-N-acyltransferase like 2 protein-coding chr9-857 chr9 33081303 33081513 + 21.6 0.000 Intergenic Intergenic -4734 NM_018225 55234 Hs.655351 NM_018225 ENSG00000122692 SMU1 BWD|SMU-1|fSAP57 SMU1 DNA replication regulator and spliceosomal factor protein-coding chr12-621 chr12 10750174 10750384 + 21.6 0.000 promoter-TSS (NR_120463) promoter-TSS (NR_120463) 45 NR_120463 101928162 Hs.112950 NR_120463 ENSG00000256888 LINC02366 - long intergenic non-protein coding RNA 2366 ncRNA chr4-252 chr4 78939223 78939433 + 21.6 0.000 non-coding (NR_146462, exon 1 of 7) non-coding (NR_146462, exon 1 of 7) 110 NM_001040202 152559 Hs.657312 NM_177453 ENSG00000163291 PAQR3 RKTG progestin and adipoQ receptor family member 3 protein-coding chr2-1041 chr2 74867816 74868026 + 21.6 0.000 intron (NM_000189, intron 3 of 17) intron (NM_000189, intron 3 of 17) 35266 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr5-307 chr5 14664596 14664806 + 21.6 0.000 promoter-TSS (NM_138348) promoter-TSS (NM_138348) -17 NM_138348 90268 Hs.406335 NM_138348 ENSG00000154124 OTULIN AIPDS|FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding chr11-610 chr11 93197770 93197980 + 21.6 0.000 promoter-TSS (NM_001286139) promoter-TSS (NM_001286139) 116 NM_152313 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr4-363 chr4 141375968 141376178 + 21.6 0.000 Intergenic L1PA16|LINE|L1 -43456 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr16-485 chr16 11586998 11587208 + 21.6 0.000 promoter-TSS (NM_001136472) promoter-TSS (NM_001136472) -153 NM_001136472 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr7-533 chr7 30173162 30173372 + 21.6 0.000 Intergenic Intergenic 38281 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr3-320 chr3 123067015 123067225 + 21.6 0.000 promoter-TSS (NR_028444) promoter-TSS (NR_028444) 95 NM_006810 10954 Hs.477352 NM_006810 ENSG00000065485 PDIA5 PDIR protein disulfide isomerase family A member 5 protein-coding chr20-399 chr20 47792056 47792266 + 21.6 0.000 Intergenic Intergenic -5545 NM_001161841 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr17-627 chr17 44111047 44111257 + 21.6 0.000 intron (NM_001015053, intron 2 of 26) intron (NM_001015053, intron 2 of 26) -4760 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 - uncharacterized LOC105371789 ncRNA chr17-615 chr17 75085682 75085892 + 21.6 0.000 Intergenic LTR8|LTR|ERV1 -1978 NM_001271765 9121 Hs.592095 NM_004695 ENSG00000170190 SLC16A5 MCT5|MCT6 solute carrier family 16 member 5 protein-coding chr4-606 chr4 169229575 169229785 + 21.6 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 41276 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr1-838 chr1 2214088 2214298 + 21.6 0.000 Intergenic Intergenic -1473 NM_001282670 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr1-2097 chr1 112872540 112872750 + 21.6 0.000 Intergenic MER21A|LTR|ERVL -9405 NR_162120 113218506 NR_162120 MIR11399 - microRNA 11399 ncRNA chr2-1081 chr2 114022774 114022984 + 21.6 0.000 intron (NR_148509, intron 1 of 1) MLT2C2|LTR|ERVL -42895 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr17-967 chr17 79988311 79988521 + 21.6 0.000 intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) -37563 NM_001271846 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr4-481 chr4 75715368 75715578 + 21.6 0.000 Intergenic Intergenic -9049 NM_001290049 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr2-463 chr2 27409483 27409693 + 21.6 0.000 promoter-TSS (NM_177983) promoter-TSS (NM_177983) 3 NM_177983 5496 Hs.643951 NM_177983 ENSG00000115241 PPM1G PP2CG|PP2CGAMMA|PPP2CG protein phosphatase, Mg2+/Mn2+ dependent 1G protein-coding chr7-424 chr7 94004226 94004436 + 21.6 0.000 promoter-TSS (NM_005868) promoter-TSS (NM_005868) 24 NM_001317739 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr7-564 chr7 99562921 99563131 + 21.6 0.000 intron (NM_001085367, intron 4 of 4) intron (NM_001085367, intron 4 of 4) 4192 NM_001363333 79027 Hs.599798 NM_024061 ENSG00000197343 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding chr5-1068 chr5 168334845 168335055 + 21.6 0.000 intron (NM_001161661, intron 1 of 22) intron (NM_001161661, intron 1 of 22) 43305 NM_001161661 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr19-484 chr19 45497082 45497292 + 21.6 0.000 promoter-TSS (NM_206900) promoter-TSS (NM_206900) -140 NM_206900 6253 Hs.47517 NM_005619 ENSG00000125744 RTN2 NSP2|NSPL1|NSPLI|SPG12 reticulon 2 protein-coding chr1-1423 chr1 35097308 35097518 + 21.6 0.000 exon (NM_001289088, exon 5 of 11) exon (NM_001289088, exon 5 of 11) 18028 NM_024772 79830 Hs.471243 NM_024772 ENSG00000197056 ZMYM1 MYM zinc finger MYM-type containing 1 protein-coding chr16-943 chr16 65119974 65120184 + 21.6 0.000 intron (NM_001330576, intron 1 of 11) intron (NM_001330576, intron 1 of 11) 1984 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr7-802 chr7 84042211 84042421 + 21.6 0.000 intron (NM_006080, intron 6 of 16) intron (NM_006080, intron 6 of 16) 152473 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr6-851 chr6 7147140 7147350 + 21.6 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 39284 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr22-619 chr22 28344925 28345135 + 21.6 0.000 intron (NM_001145418, intron 2 of 22) MIRb|SINE|MIR -114839 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr3-638 chr3 113276148 113276358 + 21.6 0.000 intron (NM_033254, intron 9 of 19) intron (NM_033254, intron 9 of 19) 64137 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr2-1518 chr2 72689704 72689914 + 21.6 0.000 intron (NR_135774, intron 6 of 19) intron (NR_135774, intron 6 of 19) 136224 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr2-1650 chr2 45283702 45283912 + 21.6 0.000 Intergenic Intergenic -28866 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr6-410 chr6 28267129 28267339 + 21.6 0.000 promoter-TSS (NM_001287421) promoter-TSS (NM_001287421) -125 NM_001287421 7741 Hs.157883 NM_007151 ENSG00000197062 ZSCAN26 SRE-ZBP|SREZBP|ZNF187 zinc finger and SCAN domain containing 26 protein-coding chr17-682 chr17 45172710 45172920 + 21.6 0.000 Intergenic Intergenic -1330 NR_135646 105371795 Hs.569733 NR_135646 ENSG00000267288 LOC105371795 - uncharacterized LOC105371795 ncRNA chr7-675 chr7 30863742 30863952 + 21.6 0.000 intron (NR_037598, intron 15 of 19) intron (NR_037598, intron 15 of 19) -47847 NM_198098 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr12-730 chr12 93677286 93677496 + 21.6 0.000 promoter-TSS (NM_001320101) promoter-TSS (NM_001320101) 16 NM_003805 8738 Hs.38533 NM_003805 ENSG00000169372 CRADD MRT34|RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding chr15-462 chr15 52261845 52262055 + 21.6 0.000 intron (NM_018728, intron 9 of 40) intron (NM_018728, intron 9 of 40) 15250 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr3-538 chr3 47394247 47394457 + 21.6 0.000 intron (NM_015466, intron 1 of 24) intron (NM_015466, intron 1 of 24) 13331 NM_001304482 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr17-1441 chr17 29412876 29413086 + 21.6 0.000 intron (NM_025142, intron 1 of 17) Charlie4z|DNA|hAT-Charlie 22056 NM_020791 57551 Hs.597434 NM_020791 ENSG00000160551 TAOK1 KFC-B|MAP3K16|MARKK|PSK-2|PSK2|TAO1|hKFC-B|hTAOK1 TAO kinase 1 protein-coding chr19-1462 chr19 47613291 47613501 + 21.6 0.000 intron (NM_015711, intron 1 of 14) intron (NM_015711, intron 1 of 14) 5200 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr6-499 chr6 112289168 112289378 + 21.6 0.000 intron (NR_121193, intron 2 of 2) intron (NR_121193, intron 2 of 2) -34558 NM_001105208 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr15-184 chr15 41493586 41493796 + 21.6 0.000 promoter-TSS (NM_002220) promoter-TSS (NM_002220) -183 NM_002220 3706 Hs.2722 NM_002220 ENSG00000137825 ITPKA IP3-3KA|IP3KA inositol-trisphosphate 3-kinase A protein-coding chr11-1846 chr11 87614251 87614461 + 21.6 0.000 Intergenic L2b|LINE|L2 105055 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr1-668 chr1 1574729 1574939 + 21.6 0.000 promoter-TSS (NM_014188) promoter-TSS (NM_014188) 29 NM_014188 29101 Hs.30026 NM_014188 ENSG00000160075 SSU72 HSPC182|PNAS-120 SSU72 homolog, RNA polymerase II CTD phosphatase protein-coding chr17-705 chr17 39400973 39401183 + 21.6 0.000 intron (NM_001370209, intron 1 of 13) intron (NM_001370209, intron 1 of 13) 548 NM_001184906 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr18-156 chr18 658151 658361 + 21.6 0.000 promoter-TSS (NM_001012716) promoter-TSS (NM_001012716) 35 NM_001012716 494514 Hs.274959 NM_001012716 TYMSOS C18orf56 TYMS opposite strand protein-coding chr8-494 chr8 48764685 48764895 + 21.6 0.000 Intergenic Intergenic -29479 NR_157026 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr12-1080 chr12 47779417 47779627 + 21.6 0.000 intron (NM_017842, intron 2 of 2) intron (NM_017842, intron 2 of 2) 6284 NM_017842 55652 Hs.438867 NM_017842 ENSG00000211584 SLC48A1 HRG-1|HRG1|hHRG-1 solute carrier family 48 member 1 protein-coding chr16-250 chr16 88651079 88651289 + 21.6 0.000 promoter-TSS (NM_000101) promoter-TSS (NM_000101) -131 NM_000101 1535 Hs.513803 NM_000101 ENSG00000051523 CYBA p22-PHOX cytochrome b-245 alpha chain protein-coding chr15-284 chr15 66459923 66460133 + 21.6 0.000 intron (NM_002755, intron 5 of 10) intron (NM_002755, intron 5 of 10) 37006 NR_039737 100616149 NR_039737 ENSG00000266589 MIR4512 - microRNA 4512 ncRNA chr16-1019 chr16 85757321 85757531 + 21.6 0.000 Intergenic L1MB7|LINE|L1 -6330 NR_161453 404550 Hs.461655 NM_206967 ENSG00000154102 C16orf74 - chromosome 16 open reading frame 74 protein-coding chr3-1855 chr3 108131170 108131380 + 21.6 0.000 intron (NR_110028, intron 1 of 2) MIRc|SINE|MIR 5454 NR_110028 101929623 Hs.570653 NR_110028 ENSG00000271856 LINC01215 - long intergenic non-protein coding RNA 1215 ncRNA chr20-205 chr20 11267355 11267565 + 21.6 0.000 non-coding (NR_038972, exon 2 of 2) non-coding (NR_038972, exon 2 of 2) 5923 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr16-629 chr16 56477213 56477423 + 21.6 0.000 3' UTR (NM_018233, exon 13 of 13) 3' UTR (NM_018233, exon 13 of 13) 25234 NM_001324358 55239 Hs.231883 NM_018233 ENSG00000087263 OGFOD1 TPA1 2-oxoglutarate and iron dependent oxygenase domain containing 1 protein-coding chr2-339 chr2 27380575 27380785 + 21.6 0.000 promoter-TSS (NM_144631) promoter-TSS (NM_144631) 54 NM_144631 130557 Hs.515872 NM_144631 ENSG00000163795 ZNF513 HMFT0656|RP58 zinc finger protein 513 protein-coding chr20-273 chr20 3932970 3933180 + 21.6 0.000 3' UTR (NM_001134338, exon 7 of 7) 3' UTR (NM_001134338, exon 7 of 7) -15512 NR_031722 100302282 NR_031722 ENSG00000283320 MIR103B2 MIR103-2-AS|MIR103-2AS|MIRN103-2AS|hsa-mir-103-2-as microRNA 103b-2 ncRNA chr2-2396 chr2 19611852 19612062 + 21.6 0.000 Intergenic Intergenic -253334 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr10-1435 chr10 33055701 33055911 + 21.6 0.000 Intergenic Intergenic 61001 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr3-907 chr3 185937885 185938095 + 21.6 0.000 promoter-TSS (NM_001243879) promoter-TSS (NM_001243879) 24 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr2-2089 chr2 229928099 229928309 + 21.6 0.000 intron (NM_174899, intron 1 of 3) L1MC4a|LINE|L1 -5024 NM_001348335 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr17-1491 chr17 13704561 13704771 + 21.6 0.000 Intergenic Intergenic -102737 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr3-639 chr3 122416102 122416312 + 21.6 0.000 promoter-TSS (NR_125405) promoter-TSS (NR_125405) 1 NR_125405 102723582 Hs.675056 NR_125405 ENSG00000272758 LOC102723582 - uncharacterized LOC102723582 ncRNA chr2-692 chr2 152062906 152063116 + 21.6 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) 35752 NM_001330113 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr14-369 chr14 53894502 53894712 + 21.6 0.000 Intergenic Intergenic 53877 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr2-1062 chr2 217279714 217279924 + 21.6 0.000 Intergenic Intergenic -2914 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr16-909 chr16 66357683 66357893 + 21.6 0.000 Intergenic MIR|SINE|MIR -8903 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr12-774 chr12 120446259 120446469 + 21.6 0.000 promoter-TSS (NR_033684) promoter-TSS (NR_033684) 20 NM_016399 51499 Hs.69499 NM_016399 ENSG00000170855 TRIAP1 HSPC132|MDM35|P53CSV|WF-1 TP53 regulated inhibitor of apoptosis 1 protein-coding chr9-669 chr9 92242414 92242624 + 21.6 0.000 intron (NR_073446, intron 27 of 32) intron (NR_073446, intron 27 of 32) 50028 NR_037424 100500918 NR_037424 ENSG00000281156 MIR3651 mir-3651 microRNA 3651 ncRNA chr17-628 chr17 44503325 44503535 + 21.6 0.000 promoter-TSS (NM_001304939) promoter-TSS (NM_001304939) -24 NM_001002909 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr11-1079 chr11 112241540 112241750 + 21.6 0.000 Intergenic Intergenic 15217 NM_000317 5805 Hs.503860 NM_000317 ENSG00000150787 PTS PTPS 6-pyruvoyltetrahydropterin synthase protein-coding chr17-905 chr17 68710361 68710571 + 21.6 0.000 Intergenic Intergenic 82312 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr2-1458 chr2 27050725 27050935 + 21.6 0.000 promoter-TSS (NM_001035507) promoter-TSS (NM_001035507) -566 NR_046730 100874031 Hs.132725 NR_046730 ENSG00000231636 AGBL5-AS1 - AGBL5 antisense RNA 1 ncRNA chr1-1608 chr1 85297841 85298051 + 21.6 0.000 Intergenic Intergenic -21314 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr3-614 chr3 124584673 124584883 + 21.6 0.000 5' UTR (NM_001322998, exon 1 of 15) 5' UTR (NM_001322998, exon 1 of 15) 119 NM_001322994 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr3-427 chr3 49171243 49171453 + 21.6 0.000 promoter-TSS (NM_173546) promoter-TSS (NM_173546) -250 NM_173546 200942 Hs.13781 NM_173546 ENSG00000185909 KLHDC8B CHL kelch domain containing 8B protein-coding chr13-567 chr13 34570994 34571204 + 21.6 0.000 intron (NR_047036, intron 1 of 2) intron (NR_047036, intron 1 of 2) 69586 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr10-397 chr10 102674087 102674297 + 21.6 0.000 3' UTR (NM_004311, exon 6 of 6) 3' UTR (NM_004311, exon 6 of 6) 29697 NR_144321 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr16-789 chr16 66911252 66911462 + 21.6 0.000 intron (NM_001204745, intron 13 of 17) intron (NM_001204745, intron 13 of 17) 7528 NM_001204745 1014 Hs.513660 NM_004062 ENSG00000166589 CDH16 - cadherin 16 protein-coding chr17-892 chr17 44141656 44141866 + 21.6 0.000 promoter-TSS (NM_001321310) promoter-TSS (NM_001321310) -169 NM_001171251 78995 Hs.437059 NM_024032 ENSG00000125319 C17orf53 - chromosome 17 open reading frame 53 protein-coding chr15-628 chr15 67080627 67080837 + 21.6 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) 15130 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr15-647 chr15 47293910 47294120 + 21.6 0.000 intron (NM_001198999, intron 1 of 19) intron (NM_001198999, intron 1 of 19) 109926 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chrY-4 chrY 11295686 11295896 + 21.6 0.000 Intergenic Intergenic 1125799 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr13-229 chr13 94061508 94061718 + 21.6 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) 126378 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr16-631 chr16 74700388 74700598 + 21.6 0.000 5' UTR (NM_152649, exon 1 of 11) 5' UTR (NM_152649, exon 1 of 11) 369 NM_152649 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr5-357 chr5 62412473 62412683 + 21.6 0.000 promoter-TSS (NM_016338) promoter-TSS (NM_016338) -168 NM_016338 51194 Hs.482269 NM_016338 ENSG00000086200 IPO11 RanBP11 importin 11 protein-coding chr6-123 chr6 107958194 107958404 + 21.6 0.000 promoter-TSS (NM_007214) promoter-TSS (NM_007214) -91 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr15-275 chr15 40323451 40323661 + 21.6 0.000 promoter-TSS (NM_001301268) promoter-TSS (NM_001301268) -136 NM_001301268 100505573 Hs.530791 NM_001301268 ENSG00000259330 INAFM2 LINC00984|OGU1 InaF motif containing 2 protein-coding chr14-291 chr14 104736265 104736475 + 21.4 0.000 intron (NM_199165, intron 2 of 12) intron (NM_199165, intron 2 of 12) 6526 NM_199165 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr2-792 chr2 217551590 217551800 + 21.4 0.000 intron (NR_026597, intron 2 of 12) Mam_R4|LINE|Dong-R4 204898 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr6-144 chr6 145735337 145735547 + 21.4 0.000 promoter-TSS (NM_001360057) promoter-TSS (NM_001360057) 78 NM_001368129 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr10-878 chr10 60430205 60430415 + 21.4 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -40435 NM_020987 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr8-105 chr8 38787116 38787326 + 21.4 0.000 promoter-TSS (NM_001352779) promoter-TSS (NM_001352779) -15 NM_001352779 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr3-1549 chr3 195896622 195896832 + 21.4 0.000 intron (NM_005781, intron 1 of 14) intron (NM_005781, intron 1 of 14) -1379 NM_001010938 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr1-826 chr1 162003185 162003395 + 21.4 0.000 intron (NM_001347700, intron 4 of 7) intron (NM_001347700, intron 4 of 7) 21175 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr10-590 chr10 79179005 79179215 + 21.4 0.000 intron (NM_020338, intron 4 of 24) intron (NM_020338, intron 4 of 24) 110144 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr2-1123 chr2 241392167 241392377 + 21.4 0.000 intron (NM_014808, intron 2 of 26) LTR41C|LTR|ERVL 35987 NM_001282983 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr1-1547 chr1 236141450 236141660 + 21.4 0.000 promoter-TSS (NM_003272) promoter-TSS (NM_003272) -984 NM_003272 7107 Hs.498160 NM_003272 ENSG00000077585 GPR137B TM7SF1 G protein-coupled receptor 137B protein-coding chr2-1946 chr2 222943836 222944046 + 21.4 0.000 3' UTR (NM_203372, exon 16 of 16) 3' UTR (NM_203372, exon 16 of 16) 82905 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr12-831 chr12 56522802 56523012 + 21.4 0.000 intron (NM_002898, intron 1 of 13) intron (NM_002898, intron 1 of 13) 1087 NM_002898 5939 Hs.505729 NM_002898 ENSG00000076067 RBMS2 SCR3 RNA binding motif single stranded interacting protein 2 protein-coding chr4-619 chr4 169383894 169384104 + 21.4 0.000 Intergenic Intergenic -113043 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr10-825 chr10 100209398 100209608 + 21.4 0.000 intron (NM_001278, intron 10 of 20) intron (NM_001278, intron 10 of 20) 20093 NM_001278 1147 Hs.198998 NM_001278 ENSG00000213341 CHUK IKBKA|IKK-alpha|IKK1|IKKA|NFKBIKA|TCF16 component of inhibitor of nuclear factor kappa B kinase complex protein-coding chr4-680 chr4 124931105 124931315 + 21.4 0.000 Intergenic Intergenic -218478 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr9-970 chr9 123696545 123696755 + 21.4 0.000 intron (NM_001352968, intron 4 of 18) intron (NM_001352968, intron 4 of 18) -211028 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr9-620 chr9 112041856 112042066 + 21.4 0.000 intron (NM_001282643, intron 14 of 15) intron (NM_001282643, intron 14 of 15) 109861 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr1-383 chr1 23743249 23743459 + 21.4 0.000 promoter-TSS (NM_003198) promoter-TSS (NM_003198) -12 NM_003198 6924 Hs.15535 NM_003198 ENSG00000011007 ELOA SIII|SIII p110|TCEB3|TCEB3A elongin A protein-coding chr17-647 chr17 47905194 47905404 + 21.4 0.000 intron (NR_103856, intron 2 of 2) intron (NR_103856, intron 2 of 2) 9063 NM_003110 6668 Hs.514276 NM_003110 ENSG00000167182 SP2 - Sp2 transcription factor protein-coding chr6-348 chr6 152301908 152302118 + 21.4 0.000 exon (NM_033071, exon 91 of 146) exon (NM_033071, exon 91 of 146) -78517 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr4-505 chr4 87006630 87006840 + 21.4 0.000 promoter-TSS (NM_001313959) promoter-TSS (NM_001313959) -253 NM_001313960 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr5-836 chr5 54329886 54330096 + 21.4 0.000 intron (NR_126379, intron 1 of 4) ERVL-E-int|LTR|ERVL 9047 NR_126379 104355136 Hs.559024 NR_126379 ENSG00000249069 LINC01033 - long intergenic non-protein coding RNA 1033 ncRNA chr3-428 chr3 50562885 50563095 + 21.4 0.000 intron (NM_001171743, intron 2 of 4) intron (NM_001171743, intron 2 of 4) 4757 NM_016210 51161 Hs.517860 NM_016210 ENSG00000088543 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding chr9-767 chr9 124212580 124212790 + 21.4 0.000 Intergenic Intergenic -44921 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr3-840 chr3 15646966 15647176 + 21.4 0.000 3' UTR (NM_001281724, exon 6 of 6) 3' UTR (NM_001281724, exon 6 of 6) 45102 NM_001281725 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr19-814 chr19 46793112 46793322 + 21.4 0.000 Intergenic Intergenic -4623 NM_005628 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding chr19-1250 chr19 48968279 48968489 + 21.4 0.000 non-coding (NR_027763, exon 15 of 15) non-coding (NR_027763, exon 15 of 15) 3075 NM_000146 2512 Hs.433670 NM_000146 ENSG00000087086 FTL LFTD|NBIA3 ferritin light chain protein-coding chr10-1216 chr10 28663974 28664184 + 21.4 0.000 Intergenic Intergenic -13442 NM_012342 25805 Hs.533336 NM_012342 ENSG00000095739 BAMBI NMA BMP and activin membrane bound inhibitor protein-coding chr2-785 chr2 142131266 142131476 + 21.4 0.000 5' UTR (NM_018557, exon 1 of 91) 5' UTR (NM_018557, exon 1 of 91) 330 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr5-704 chr5 64497391 64497601 + 21.4 0.000 Intergenic L2|LINE|L2 -8519 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr1-1063 chr1 201480700 201480910 + 21.4 0.000 Intergenic MER5B|DNA|hAT-Charlie -11617 NM_012396 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr14-346 chr14 60563226 60563436 + 21.4 0.000 Intergenic Intergenic 54185 NM_007374 4990 Hs.194756 NM_007374 ENSG00000184302 SIX6 MCOPCT2|ODRMD|OPTX2|Six9 SIX homeobox 6 protein-coding chr8-510 chr8 53885592 53885802 + 21.4 0.000 intron (NR_104579, intron 1 of 3) intron (NR_104579, intron 1 of 3) 4825 NR_104579 8601 Hs.368733 NM_003702 ENSG00000147509 RGS20 RGSZ1|ZGAP1|g(z)GAP|gz-GAP regulator of G protein signaling 20 protein-coding chr4-666 chr4 56467368 56467578 + 21.4 0.000 promoter-TSS (NM_006947) promoter-TSS (NM_006947) -144 NM_006947 6731 Hs.237825 NM_006947 ENSG00000174780 SRP72 BMFF|BMFS1|HEL103 signal recognition particle 72 protein-coding chr5-545 chr5 190517 190727 + 21.4 0.000 promoter-TSS (NM_001080478) promoter-TSS (NM_001080478) -873 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr5-714 chr5 83507453 83507663 + 21.4 0.000 intron (NM_001164098, intron 5 of 13) intron (NM_001164098, intron 5 of 13) 35814 NM_004385 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr5-442 chr5 150473166 150473376 + 21.4 0.000 Intergenic L2b|LINE|L2 12721 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chr2-1181 chr2 35973305 35973515 + 21.4 0.000 Intergenic Intergenic 382160 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr6-461 chr6 15969311 15969521 + 21.4 0.000 Intergenic Intergenic -159670 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chrX-264 chrX 37872137 37872347 + 21.4 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -24671 NM_006520 6990 Hs.446392 NM_006520 ENSG00000165169 DYNLT3 RP3|TCTE1L|TCTEX1L dynein light chain Tctex-type 3 protein-coding chr2-1164 chr2 197264382 197264592 + 21.4 0.000 intron (NR_046837, intron 5 of 5) intron (NR_046837, intron 5 of 5) 38032 NR_046837 101927547 Hs.687027 NR_046837 ENSG00000236977 ANKRD44-IT1 - ANKRD44 intronic transcript 1 ncRNA chr1-979 chr1 93909610 93909820 + 21.4 0.000 promoter-TSS (NM_002061) promoter-TSS (NM_002061) -117 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr1-1485 chr1 184050757 184050967 + 21.4 0.000 promoter-TSS (NM_052965) promoter-TSS (NM_052965) -868 NR_125335 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr8-230 chr8 143494223 143494433 + 21.4 0.000 intron (NM_015117, intron 4 of 11) intron (NM_015117, intron 4 of 11) 11920 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr1-1169 chr1 108963396 108963606 + 21.4 0.000 promoter-TSS (NM_015127) promoter-TSS (NM_015127) -2 NM_015127 23155 Hs.658489 NM_015127 ENSG00000121940 CLCC1 MCLC chloride channel CLIC like 1 protein-coding chr22-513 chr22 19259763 19259973 + 21.4 0.000 intron (NM_007098, intron 2 of 32) Tigger1|DNA|TcMar-Tigger 31851 NM_001835 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr7-781 chr7 129635529 129635739 + 21.4 0.000 intron (NM_001040110, intron 1 of 10) intron (NM_001040110, intron 1 of 10) 5556 NM_001040110 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr10-598 chr10 24254196 24254406 + 21.4 0.000 intron (NM_019590, intron 2 of 20) MIR3|SINE|MIR -21384 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr5-585 chr5 103562506 103562716 + 21.4 0.000 intron (NM_001300741, intron 1 of 6) intron (NM_001300741, intron 1 of 6) 178 NM_031438 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr8-557 chr8 51870080 51870290 + 21.4 0.000 intron (NM_001363193, intron 1 of 5) intron (NM_001363193, intron 1 of 5) 28851 NM_052937 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr13-275 chr13 90238463 90238673 + 21.4 0.000 Intergenic Intergenic 7386 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr11-516 chr11 64318073 64318283 + 21.4 0.000 promoter-TSS (NM_001358516) promoter-TSS (NM_001358516) 57 NM_181652 25824 Hs.502823 NM_012094 ENSG00000126432 PRDX5 ACR1|AOEB166|B166|HEL-S-55|PLP|PMP20|PRDX6|PRXV|SBBI10|prx-V peroxiredoxin 5 protein-coding chr12-528 chr12 100058728 100058938 + 21.4 0.000 exon (NM_015054, exon 14 of 21) exon (NM_015054, exon 14 of 21) -74179 NM_001352186 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr2-2913 chr2 235098900 235099110 + 21.4 0.000 Intergenic Intergenic 71270 NM_001371306 chr7-865 chr7 76364730 76364940 + 21.4 0.000 Intergenic MIR3|SINE|MIR -5844 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|EIEE56|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding chr5-553 chr5 82396999 82397209 + 21.4 0.000 Intergenic Intergenic 117642 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr16-607 chr16 75267957 75268167 + 21.4 0.000 promoter-TSS (NM_001170715).2 promoter-TSS (NM_001170715).2 -55 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr1-1079 chr1 19563776 19563986 + 21.4 0.000 Intergenic Intergenic 32951 NR_135054 105378614 Hs.430098 NR_135054 ENSG00000235185 LOC105378614 - uncharacterized LOC105378614 ncRNA chr7-423 chr7 88219913 88220123 + 21.4 0.000 promoter-TSS (NM_003130) promoter-TSS (NM_003130) 66 NM_003130 6717 Hs.489040 NM_003130 ENSG00000075142 SRI CP-22|CP22|SCN|V19 sorcin protein-coding chr13-391 chr13 40777418 40777628 + 21.4 0.000 Intergenic Intergenic -6333 NM_005830 10240 Hs.596607 NM_005830 ENSG00000102738 MRPS31 IMOGN38|MRP-S31|S31mt mitochondrial ribosomal protein S31 protein-coding chr9-331 chr9 88534761 88534971 + 21.4 0.000 promoter-TSS (NM_001161625) promoter-TSS (NM_001161625) -235 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr17-552 chr17 81937163 81937373 + 21.4 0.000 promoter-TSS (NM_006907) promoter-TSS (NM_006907) 32 NM_001282281 5831 Hs.163451 NM_006907 ENSG00000183010 PYCR1 ARCL2B|ARCL3B|P5C|P5CR|PIG45|PP222|PRO3|PYCR pyrroline-5-carboxylate reductase 1 protein-coding chr11-648 chr11 74697015 74697225 + 21.4 0.000 intron (NM_001304390, intron 10 of 10) intron (NM_001304390, intron 10 of 10) 14247 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr9-607 chr9 132069630 132069840 + 21.4 0.000 intron (NM_001253881, intron 2 of 6) MIR3|SINE|MIR 10132 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr12-1242 chr12 29041732 29041942 + 21.4 0.000 Intergenic Intergenic -107441 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr4-542 chr4 76987347 76987557 + 21.4 0.000 intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 37700 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr19-693 chr19 18849031 18849241 + 21.4 0.000 intron (NM_002911, intron 3 of 23) intron (NM_002911, intron 3 of 23) 17177 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr6-900 chr6 131603786 131603996 + 21.4 0.000 intron (NM_015979, intron 16 of 30) L2b|LINE|L2 24351 NM_001270522 9439 Hs.29679 NM_004830 ENSG00000112282 MED23 ARC130|CRSP130|CRSP133|CRSP3|DRIP130|MRT18|SUR-2|SUR2 mediator complex subunit 23 protein-coding chr7-556 chr7 34355030 34355240 + 21.4 0.000 intron (NR_033665, intron 3 of 3) intron (NR_033665, intron 3 of 3) -303083 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr4-525 chr4 48269955 48270165 + 21.4 0.000 promoter-TSS (NM_003215) promoter-TSS (NM_003215) -222 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr11-659 chr11 8833011 8833221 + 21.4 0.000 intron (NM_005418, intron 3 of 22) intron (NM_005418, intron 3 of 22) -21781 NM_139157 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr1-1617 chr1 115977601 115977811 + 21.4 0.000 promoter-TSS (NR_125970) promoter-TSS (NR_125970) -430 NR_125970 101928977 Hs.627914 NR_125970 LOC101928977 - uncharacterized LOC101928977 ncRNA chr21-203 chr21 21267922 21268132 + 21.4 0.000 intron (NM_001352592, intron 2 of 18) intron (NM_001352592, intron 2 of 18) 120865 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr2-486 chr2 186589819 186590029 + 21.4 0.000 promoter-TSS (NM_002210) promoter-TSS (NM_002210) -132 NM_001145000 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr20-178 chr20 50115854 50116064 + 21.4 0.000 promoter-TSS (NM_001257393) promoter-TSS (NM_001257393) -2 NM_001257393 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr3-189 chr3 126475807 126476017 + 21.4 0.000 promoter-TSS (NM_025112) promoter-TSS (NM_025112) 7 NM_001040653 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr15-114 chr15 88621114 88621324 + 21.4 0.000 promoter-TSS (NM_022767) promoter-TSS (NM_022767) -121 NM_022767 64782 Hs.436102 NM_022767 ENSG00000181026 AEN ISG20L1|pp12744 apoptosis enhancing nuclease protein-coding chr1-860 chr1 112466278 112466488 + 21.4 0.000 promoter-TSS (NM_004185) promoter-TSS (NM_004185) -158 NM_004185 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr4-459 chr4 126004751 126004961 + 21.4 0.000 Intergenic LTR50|LTR|ERVL 497597 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr14-269 chr14 52791407 52791617 + 21.4 0.000 promoter-TSS (NM_198066) promoter-TSS (NM_198066) 95 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding chr9-533 chr9 106892814 106893024 + 21.4 0.000 intron (NM_001347997, intron 1 of 12) intron (NM_001347997, intron 1 of 12) 29753 NM_001347997 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chr14-408 chr14 88630695 88630905 + 21.4 0.000 intron (NM_183387, intron 32 of 42) intron (NM_183387, intron 32 of 42) 36380 NM_207662 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr4-649 chr4 140326498 140326708 + 21.4 0.000 intron (NR_033939, intron 2 of 4) intron (NR_033939, intron 2 of 4) -16840 NM_001153635 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr17-1911 chr17 69716690 69716900 + 21.4 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 122808 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr8-703 chr8 94287200 94287410 + 21.4 0.000 Intergenic Intergenic -24986 NM_181702 2669 Hs.654463 NM_005261 ENSG00000164949 GEM KIR GTP binding protein overexpressed in skeletal muscle protein-coding chr15-303 chr15 43493163 43493373 + 21.4 0.000 promoter-TSS (NM_001141979) promoter-TSS (NM_001141979) -112 NM_001141980 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding chr1-1238 chr1 93579989 93580199 + 21.4 0.000 intron (NM_001308251, intron 3 of 7) intron (NM_001308251, intron 3 of 7) 5068 NM_001308251 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr19-574 chr19 49018097 49018307 + 21.4 0.000 TTS (NR_073552) TTS (NR_073552) -1112 NM_000894 3972 Hs.154704 NM_000894 ENSG00000104826 LHB CGB4|HH23|LSH-B|LSH-beta luteinizing hormone beta polypeptide protein-coding chr8-435 chr8 68150679 68150889 + 21.4 0.000 intron (NM_024870, intron 34 of 39) MLT1C|LTR|ERVL-MaLR -179589 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr15-370 chr15 67044432 67044642 + 21.4 0.000 intron (NR_135686, intron 2 of 5) intron (NR_135686, intron 2 of 5) 19645 NR_135686 102723493 Hs.419760 NR_135686 LOC102723493 - uncharacterized LOC102723493 ncRNA chr15-318 chr15 66932202 66932412 + 21.4 0.000 intron (NR_135687, intron 2 of 2) intron (NR_135687, intron 2 of 2) 24208 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr7-981 chr7 55026544 55026754 + 21.4 0.000 intron (NM_001346941, intron 1 of 21) LTR19A|LTR|ERV1 7617 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chrX-214 chrX 115606445 115606655 + 21.4 0.000 intron (NM_001136025, intron 1 of 15) intron (NM_001136025, intron 1 of 15) 12999 NM_001172335 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr1-3118 chr1 43232159 43232369 + 21.4 0.000 intron (NM_001195831, intron 19 of 23) intron (NM_001195831, intron 19 of 23) -37719 NM_144626 128218 Hs.104476 NM_144626 ENSG00000179178 TMEM125 - transmembrane protein 125 protein-coding chr7-1038 chr7 94301151 94301361 + 21.4 0.000 Intergenic Intergenic 90936 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr3-930 chr3 69052267 69052477 + 21.4 0.000 promoter-TSS (NM_001363879) promoter-TSS (NM_001363879) -39 NM_001363879 7110 Hs.267632 NM_007114 ENSG00000144747 TMF1 ARA160|TMF TATA element modulatory factor 1 protein-coding chr2-1321 chr2 62687672 62687882 + 21.4 0.000 intron (NM_001142615, intron 1 of 22) intron (NM_001142615, intron 1 of 22) 13899 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr10-848 chr10 34816623 34816833 + 21.4 0.000 TTS (NR_108043) TTS (NR_108043) 960 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr2-706 chr2 67397193 67397403 + 21.4 0.000 promoter-TSS (NM_019002) promoter-TSS (NM_019002) -35 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr14-565 chr14 51732684 51732894 + 21.4 0.000 Intergenic Intergenic 15506 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr17-404 chr17 64130253 64130463 + 21.4 0.000 promoter-TSS (NM_001433) promoter-TSS (NM_001433) -214 NM_001433 2081 Hs.133982 NM_001433 ENSG00000178607 ERN1 IRE1|IRE1P|IRE1a|hIRE1p endoplasmic reticulum to nucleus signaling 1 protein-coding chr9-489 chr9 33452883 33453093 + 21.4 0.000 Intergenic Intergenic -5395 NM_001318144 360 Hs.234642 NM_004925 ENSG00000165272 AQP3 AQP-3|GIL aquaporin 3 (Gill blood group) protein-coding chr8-436 chr8 71520205 71520415 + 21.4 0.000 intron (NM_001370334, intron 2 of 19) intron (NM_001370334, intron 2 of 19) 27394 NM_172059 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr12-440 chr12 49222703 49222913 + 21.4 0.000 Intergenic Intergenic -5118 NM_001303114 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr1-897 chr1 159925399 159925609 + 21.4 0.000 promoter-TSS (NM_003564) promoter-TSS (NM_003564) 3 NM_003564 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr11-542 chr11 12287993 12288203 + 21.4 0.000 intron (NM_032867, intron 1 of 8) intron (NM_032867, intron 1 of 8) 1198 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr7-757 chr7 151491932 151492142 + 21.4 0.000 intron (NM_005614, intron 1 of 7) intron (NM_005614, intron 1 of 7) 27858 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr16-885 chr16 85152582 85152792 + 21.4 0.000 Intergenic Intergenic 15537 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chrX-529 chrX 71182041 71182251 + 21.4 0.000 Intergenic CpG -33066 NM_001097642 2705 Hs.333303 NM_000166 ENSG00000169562 GJB1 CMTX|CMTX1|CX32 gap junction protein beta 1 protein-coding chr13-322 chr13 31556418 31556628 + 21.4 0.000 Intergenic Intergenic -183003 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr19-651 chr19 46600966 46601176 + 21.4 0.000 promoter-TSS (NM_001370551) promoter-TSS (NM_001370551) -3 NM_001329921 808 Hs.515487 NM_005184 ENSG00000160014 CALM3 CALM|CAM1|CAM2|CAMB|CaM|CaMIII|HEL-S-72|PHKD|PHKD3 calmodulin 3 protein-coding chr11-1165 chr11 45293682 45293892 + 21.4 0.000 Intergenic Intergenic -7446 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr7-534 chr7 47669739 47669949 + 21.4 0.000 Intergenic AluJo|SINE|Alu 14600 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr11-914 chr11 102256281 102256491 + 21.4 0.000 Intergenic ERVL-E-int|LTR|ERVL -61098 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr10-167 chr10 112949930 112950140 + 21.4 0.000 promoter-TSS (NM_001198529) promoter-TSS (NM_001198529) -212 NM_001146283 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr2-1487 chr2 182038692 182038902 + 21.4 0.000 intron (NM_001261425, intron 2 of 5) L3|LINE|CR1 52944 NM_001261425 151242 Hs.10941 NM_001080545 ENSG00000150722 PPP1R1C IPP5 protein phosphatase 1 regulatory inhibitor subunit 1C protein-coding chr1-2457 chr1 55670779 55670989 + 21.4 0.000 Intergenic MIR3|SINE|MIR 274079 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr8-343 chr8 144478967 144479177 + 21.4 0.000 intron (NM_032902, intron 2 of 12) intron (NM_032902, intron 2 of 12) 721 NM_001329445 84988 Hs.521937 NM_032902 ENSG00000160972 PPP1R16A MYPT3 protein phosphatase 1 regulatory subunit 16A protein-coding chr15-678 chr15 87572336 87572546 + 21.3 0.000 Intergenic Intergenic -4488 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr3-767 chr3 106262000 106262210 + 21.3 0.000 Intergenic L1PA16|LINE|L1 -392704 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr12-795 chr12 107635065 107635275 + 21.3 0.000 intron (NM_001018072, intron 11 of 16) intron (NM_001018072, intron 11 of 16) -50562 NM_001317963 11137 Hs.506652 NM_007062 ENSG00000136045 PWP1 IEF-SSP-9502 PWP1 homolog, endonuclein protein-coding chr12-682 chr12 62848601 62848811 + 21.3 0.000 intron (NM_020700, intron 1 of 9) intron (NM_020700, intron 1 of 9) 86444 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr4-665 chr4 55553431 55553641 + 21.3 0.000 Intergenic MER51A|LTR|ERV1 -6627 NM_004898 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr1-1597 chr1 53765795 53766005 + 21.3 0.000 non-coding (NR_033142, exon 17 of 17) non-coding (NR_033142, exon 17 of 17) -26736 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chrX-212 chrX 100643969 100644179 + 21.3 0.000 promoter-TSS (NM_014467) promoter-TSS (NM_014467) -125 NM_014467 27286 Hs.306339 NM_014467 ENSG00000102359 SRPX2 BPP|CBPS|PMGX|RESDX|SRPUL sushi repeat containing protein X-linked 2 protein-coding chr22-363 chr22 20530658 20530868 + 21.3 0.000 intron (NM_001293237, intron 1 of 16) intron (NM_001293237, intron 1 of 16) 22716 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr10-982 chr10 120460899 120461109 + 21.3 0.000 intron (NR_134516, intron 2 of 4) intron (NR_134516, intron 2 of 4) 4050 NM_001030059 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr17-1038 chr17 66980234 66980444 + 21.3 0.000 intron (NM_014405, intron 1 of 3) intron (NM_014405, intron 1 of 3) 15632 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr7-816 chr7 19024323 19024533 + 21.3 0.000 Intergenic Intergenic 93208 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr8-527 chr8 22401054 22401264 + 21.3 0.000 intron (NM_001351660, intron 1 of 8) intron (NM_001351660, intron 1 of 8) 8323 NM_001351659 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr1-1285 chr1 203047367 203047577 + 21.3 0.000 intron (NM_001304331, intron 9 of 29) intron (NM_001304331, intron 9 of 29) 20981 NM_001304332 8497 Hs.153648 NM_015053 ENSG00000143847 PPFIA4 - PTPRF interacting protein alpha 4 protein-coding chr21-60 chr21 44299789 44299999 + 21.3 0.000 promoter-TSS (NM_002626) promoter-TSS (NM_002626) -159 NM_001002021 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr2-1230 chr2 40403579 40403789 + 21.3 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 26620 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr22-720 chr22 31177609 31177819 + 21.3 0.000 intron (NR_024212, intron 1 of 5) intron (NR_024212, intron 1 of 5) 17532 NR_024212 91445 Hs.517553 NM_152267 ENSG00000138942 RNF185 - ring finger protein 185 protein-coding chr3-719 chr3 15317292 15317502 + 21.3 0.000 intron (NM_001018009, intron 2 of 8) intron (NM_001018009, intron 2 of 8) 15189 NM_004844 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chrX-204 chrX 9530932 9531142 + 21.3 0.000 intron (NM_001139466, intron 2 of 17) intron (NM_001139466, intron 2 of 17) 65979 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr10-1279 chr10 15321903 15322113 + 21.3 0.000 intron (NM_001010924, intron 1 of 7) Penelope1_Vert|LINE|Penelope 49281 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr18-430 chr18 12653203 12653413 + 21.3 0.000 intron (NM_020148, intron 1 of 15) intron (NM_020148, intron 1 of 15) 3424 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr7-766 chr7 30068054 30068264 + 21.3 0.000 intron (NM_001350974, intron 12 of 12) MER5A|DNA|hAT-Charlie 23074 NM_001363474 84725 Hs.233495 NM_032639 ENSG00000106086 PLEKHA8 FAPP2 pleckstrin homology domain containing A8 protein-coding chr17-716 chr17 81021007 81021217 + 21.3 0.000 Intergenic Intergenic 13607 NR_026857 440465 Hs.448889 NM_001004336 ENSG00000226137 BAIAP2-DT BAIAP2-AS1|lnc-BAIAP2 BAIAP2 divergent transcript ncRNA chrX-62 chrX 53422362 53422572 + 21.3 0.000 promoter-TSS (NM_144968) promoter-TSS (NM_144968) 261 NM_006306 8243 Hs.211602 NM_006306 ENSG00000072501 SMC1A CDLS2|DXS423E|SB1.8|SMC1|SMC1L1|SMC1alpha|SMCB structural maintenance of chromosomes 1A protein-coding chr5-857 chr5 135354367 135354577 + 21.3 0.000 intron (NM_138610, intron 5 of 8) intron (NM_138610, intron 5 of 8) 44766 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr19-648 chr19 17932728 17932938 + 21.3 0.000 promoter-TSS (NM_001136203) promoter-TSS (NM_001136203) -182 NM_001136203 115098 Hs.100043 NM_138442 ENSG00000007080 CCDC124 - coiled-coil domain containing 124 protein-coding chr16-671 chr16 67993440 67993650 + 21.3 0.000 promoter-TSS (NM_001369657) promoter-TSS (NM_001369657) -151 NM_001369657 64174 Hs.372633 NM_022355 ENSG00000167261 DPEP2 MBD2 dipeptidase 2 protein-coding chr2-183 chr2 47782895 47783105 + 21.3 0.000 promoter-TSS (NM_001281492) promoter-TSS (NM_001281492) -82 NM_001281492 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr10-740 chr10 87203863 87204073 + 21.3 0.000 Intergenic Intergenic -21480 NM_001099338 728118 Hs.710565 NM_001099338 ENSG00000184923 NUTM2A FAM22A NUT family member 2A protein-coding chr2-2073 chr2 215773948 215774158 + 21.3 0.000 intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 56010 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr1-1242 chr1 116853785 116853995 + 21.3 0.000 Intergenic Intergenic -56026 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr15-514 chr15 70377057 70377267 + 21.3 0.000 Intergenic Intergenic 128766 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr1-1696 chr1 235971901 235972111 + 21.3 0.000 Intergenic Intergenic -88293 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr1-2234 chr1 161173075 161173285 + 21.3 0.000 intron (NM_001199873, intron 6 of 7) intron (NM_001199873, intron 6 of 7) 4327 NM_003779 8703 Hs.321231 NM_003779 ENSG00000158850 B4GALT3 beta4Gal-T3 beta-1,4-galactosyltransferase 3 protein-coding chr1-1581 chr1 28059173 28059383 + 21.3 0.000 intron (NM_001282562, intron 1 of 16) intron (NM_001282562, intron 1 of 16) 29332 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr14-547 chr14 75063845 75064055 + 21.3 0.000 promoter-TSS (NM_001107) promoter-TSS (NM_001107) 74 NM_001107 97 Hs.18573 NM_001107 ENSG00000119640 ACYP1 ACYPE acylphosphatase 1 protein-coding chr20-293 chr20 49219250 49219460 + 21.3 0.000 promoter-TSS (NM_001348187) promoter-TSS (NM_001348187) 60 NM_017895 55661 Hs.65234 NM_017895 ENSG00000124228 DDX27 DRS1|Drs1p|HSPC259|PP3241|RHLP|dJ686N3.1 DEAD-box helicase 27 protein-coding chr6-390 chr6 63598714 63598924 + 21.3 0.000 Intergenic LTR33C|LTR|ERVL 26807 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr14-465 chr14 69648454 69648664 + 21.3 0.000 intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 36963 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr4-765 chr4 47814913 47815123 + 21.3 0.000 intron (NM_006587, intron 1 of 21) intron (NM_006587, intron 1 of 21) -16327 NR_125881 101927179 Hs.570822 NR_125880 LOC101927179 - uncharacterized LOC101927179 ncRNA chr1-2509 chr1 207007398 207007608 + 21.3 0.000 Intergenic Intergenic 25253 NM_023938 79098 Hs.32417 NM_023938 ENSG00000182795 C1orf116 SARG chromosome 1 open reading frame 116 protein-coding chr9-685 chr9 37472498 37472708 + 21.3 0.000 Intergenic L1MEc|LINE|L1 -7153 NM_014872 9925 Hs.161276 NM_014872 ENSG00000168795 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding chr17-1158 chr17 17740023 17740233 + 21.3 0.000 intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) 26174 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr11-981 chr11 69145081 69145291 + 21.3 0.000 Intergenic LTR24|LTR|ERV1 -10749 NM_001369201 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chr3-413 chr3 10141763 10141973 + 21.3 0.000 promoter-TSS (NM_198156) promoter-TSS (NM_198156) 90 NM_198156 7428 Hs.517792 NM_000551 ENSG00000134086 VHL HRCA1|RCA1|VHL1|pVHL von Hippel-Lindau tumor suppressor protein-coding chr19-847 chr19 57435193 57435403 + 21.3 0.000 promoter-TSS (NM_001321953) promoter-TSS (NM_001321953) -27 NM_001321953 388567 Hs.467358 NM_001023561 ENSG00000186230 ZNF749 - zinc finger protein 749 protein-coding chr14-672 chr14 69069082 69069292 + 21.3 0.000 intron (NM_003861, intron 7 of 8) intron (NM_003861, intron 7 of 8) 83412 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr1-1182 chr1 9314170 9314380 + 21.3 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 21381 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr3-671 chr3 54951533 54951743 + 21.3 0.000 intron (NM_001304389, intron 1 of 2) MIRb|SINE|MIR 15464 NM_001304389 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr2-561 chr2 46036958 46037168 + 21.3 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -260344 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr7-1063 chr7 1818059 1818269 + 21.3 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) 26089 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr8-591 chr8 17131607 17131817 + 21.3 0.000 Intergenic LTR41|LTR|ERVL -24770 NM_016353 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr11-2085 chr11 94794881 94795091 + 21.3 0.000 intron (NM_001301007, intron 1 of 11) intron (NM_001301007, intron 1 of 11) 26630 NM_001301007 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr15-312 chr15 42511139 42511349 + 21.3 0.000 intron (NM_130798, intron 1 of 6) intron (NM_130798, intron 1 of 6) 15610 NM_003825 8773 Hs.511149 NM_003825 ENSG00000092531 SNAP23 HsT17016|SNAP-23|SNAP23A|SNAP23B synaptosome associated protein 23 protein-coding chr5-731 chr5 150278989 150279199 + 21.3 0.000 intron (NM_001369025, intron 1 of 17) intron (NM_001369025, intron 1 of 17) 10679 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chr4-394 chr4 153222238 153222448 + 21.3 0.000 intron (NM_001302693, intron 1 of 2) intron (NM_001302693, intron 1 of 2) 17900 NM_001351057 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr9-441 chr9 98255797 98256007 + 21.3 0.000 promoter-TSS (NM_001267571) promoter-TSS (NM_001267571) -253 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr3-1014 chr3 101950653 101950863 + 21.3 0.000 intron (NR_026934, intron 1 of 3) intron (NR_026934, intron 1 of 3) 9899 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr16-263 chr16 1959444 1959654 + 21.3 0.000 promoter-TSS (NM_004548) promoter-TSS (NM_004548) 11 NM_004548 4716 Hs.513266 NM_004548 ENSG00000140990 NDUFB10 PDSW NADH:ubiquinone oxidoreductase subunit B10 protein-coding chr1-912 chr1 21783048 21783258 + 21.3 0.000 promoter-TSS (NM_001350168) promoter-TSS (NM_001350168) -4 NM_001350167 84196 Hs.467524 NM_032236 ENSG00000090686 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding chr10-733 chr10 43407599 43407809 + 21.3 0.000 intron (NM_001098204, intron 1 of 3) CpG 147 NM_001098206 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr3-921 chr3 43867758 43867968 + 21.3 0.000 Intergenic Intergenic -176269 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr2-861 chr2 120613882 120614092 + 21.3 0.000 Intergenic Intergenic -121881 NM_001371271 chr3-414 chr3 11155381 11155591 + 21.3 0.000 intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) 993 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr5-478 chr5 171649075 171649285 + 21.3 0.000 Intergenic MER117|DNA|hAT-Charlie -136692 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr11-1146 chr11 121466619 121466829 + 21.3 0.000 intron (NM_003105, intron 1 of 47) intron (NM_003105, intron 1 of 47) 14410 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr12-726 chr12 51024685 51024895 + 21.3 0.000 intron (NM_001174125, intron 1 of 15) intron (NM_001174125, intron 1 of 15) 1351 NM_001174129 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr1-1609 chr1 85366536 85366746 + 21.3 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) 37865 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr8-529 chr8 22865010 22865220 + 21.3 0.000 intron (NM_001363233, intron 3 of 6) CpG -12857 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr9-1049 chr9 419551 419761 + 21.3 0.000 intron (NM_001193536, intron 29 of 46) intron (NM_001193536, intron 29 of 46) -50635 NM_001256876 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr8-270 chr8 144767456 144767666 + 21.3 0.000 Intergenic Intergenic -12030 NM_138367 90987 Hs.534516 NM_138367 ENSG00000198169 ZNF251 - zinc finger protein 251 protein-coding chr3-585 chr3 30578548 30578758 + 21.3 0.000 Intergenic MER72B|LTR|ERV1 -27849 NM_001024847 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr15-461 chr15 44501974 44502184 + 21.3 0.000 intron (NM_016396, intron 8 of 12) intron (NM_016396, intron 8 of 12) 34821 NR_034171 645212 Hs.594287 NR_034170 EIF3J-DT EIF3J-AS1 EIF3J divergent transcript ncRNA chr5-605 chr5 43067406 43067616 + 21.3 0.000 promoter-TSS (NR_104651) promoter-TSS (NR_104651) -72 NR_104651 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA chr7-1070 chr7 47600997 47601207 + 21.3 0.000 Intergenic Intergenic -18991 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr12-887 chr12 101052166 101052376 + 21.3 0.000 intron (NM_001286616, intron 13 of 26) intron (NM_001286616, intron 13 of 26) -86287 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr17-843 chr17 1495232 1495442 + 21.3 0.000 3' UTR (NM_016532, exon 12 of 12) 3' UTR (NM_016532, exon 12 of 12) -2651 NM_001080779 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr4-209 chr4 121697025 121697235 + 21.3 0.000 promoter-TSS (NM_001154) promoter-TSS (NM_001154) -150 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr5-793 chr5 34706844 34707054 + 21.3 0.000 intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 19390 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr8-903 chr8 96444631 96444841 + 21.3 0.000 Intergenic MIR|SINE|MIR -49077 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr2-1219 chr2 236770262 236770472 + 21.3 0.000 Intergenic Intergenic 200542 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr6-835 chr6 148267763 148267973 + 21.3 0.000 Intergenic Intergenic -4460 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr1-1162 chr1 63124892 63125102 + 21.3 0.000 Intergenic Intergenic -112526 NR_146606 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr2-751 chr2 131492755 131492965 + 21.3 0.000 promoter-TSS (NR_026922) promoter-TSS (NR_026922) 47 NR_026922 150776 Hs.535622 NR_026922 ENSG00000152117 LOC150776 - sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) pseudogene pseudo chr18-109 chr18 59899654 59899864 + 21.3 0.000 promoter-TSS (NM_021127) promoter-TSS (NM_021127) -237 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr3-740 chr3 127775723 127775933 + 21.3 0.000 intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 47054 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr2-411 chr2 130797963 130798173 + 21.3 0.000 Intergenic CpG -38846 NM_015320 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr10-567 chr10 68099832 68100042 + 21.3 0.000 Intergenic MIRb|SINE|MIR -6070 NR_045662 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr1-1335 chr1 236517223 236517433 + 21.3 0.000 promoter-TSS (NM_201545) promoter-TSS (NM_201545) -886 NM_201545 3964 Hs.4082 NM_006499 ENSG00000116977 LGALS8 Gal-8|PCTA-1|PCTA1|Po66-CBP galectin 8 protein-coding chr2-689 chr2 102355620 102355830 + 21.3 0.000 promoter-TSS (NM_001371419) promoter-TSS (NM_001371419) -71 NM_001371420 chr19-725 chr19 19668598 19668808 + 21.3 0.000 promoter-TSS (NM_033204) promoter-TSS (NM_033204) -136 NM_033204 94039 Hs.63187 NM_033204 ENSG00000181896 ZNF101 HZF12 zinc finger protein 101 protein-coding chr10-676 chr10 110527856 110528066 + 21.3 0.000 Intergenic Intergenic 30054 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr6-567 chr6 13848720 13848930 + 21.3 0.000 Intergenic Intergenic -34265 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr15-425 chr15 70505612 70505822 + 21.3 0.000 intron (NR_146562, intron 1 of 1) intron (NR_146562, intron 1 of 1) 211 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr13-238 chr13 48009278 48009488 + 21.3 0.000 Intergenic L2|LINE|L2 -8057 NM_003850 8803 Hs.743361 NM_003850 ENSG00000136143 SUCLA2 A-BETA|A-SCS|MTDPS5|SCS-betaA succinate-CoA ligase ADP-forming beta subunit protein-coding chr8-749 chr8 48109801 48110011 + 21.3 0.000 Intergenic MLT2B4|LTR|ERVL 101475 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr1-2629 chr1 111572035 111572245 + 21.3 0.000 intron (NM_001370216, intron 1 of 7) intron (NM_001370216, intron 1 of 7) -8137 NM_001081976 57413 Hs.281342 NM_020683 ENSG00000121933 TMIGD3 AD026 transmembrane and immunoglobulin domain containing 3 protein-coding chr7-355 chr7 100827339 100827549 + 21.3 0.000 promoter-TSS (NM_004444) promoter-TSS (NM_004444) 79 NM_004444 2050 Hs.437008 NM_004444 ENSG00000196411 EPHB4 CMAVM2|HFASD|HTK|LMPHM7|MYK1|TYRO11 EPH receptor B4 protein-coding chr9-1206 chr9 124527854 124528064 + 21.3 0.000 intron (NM_001278546, intron 7 of 9) intron (NM_001278546, intron 7 of 9) -20560 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr7-1321 chr7 152146059 152146269 + 21.3 0.000 intron (NM_170606, intron 53 of 58) intron (NM_170606, intron 53 of 58) 71127 NM_001371474 chr17-1311 chr17 69762088 69762298 + 21.3 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 168206 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr11-1344 chr11 27218101 27218311 + 21.3 0.000 intron (NR_125767, intron 1 of 4) intron (NR_125767, intron 1 of 4) 562 NR_125768 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr19-844 chr19 45126118 45126328 + 21.3 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 33044 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr6-662 chr6 74671731 74671941 + 21.3 0.000 intron (NR_110856, intron 2 of 3) intron (NR_110856, intron 2 of 3) 456946 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr3-873 chr3 176964861 176965071 + 21.3 0.000 Intergenic Intergenic -147965 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr1-1388 chr1 116855944 116856154 + 21.3 0.000 Intergenic Intergenic -53867 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding KI270736.1-2 KI270736.1 180342 180552 + 21.3 0.000 NA NA NA NA chr16-444 chr16 48053449 48053659 + 21.3 0.000 Intergenic Intergenic 87865 NR_146502 105371238 Hs.743032 NR_146502 LINC02134 - long intergenic non-protein coding RNA 2134 ncRNA chr9-1165 chr9 36398899 36399109 + 21.3 0.000 intron (NM_194330, intron 1 of 11) intron (NM_194330, intron 1 of 11) 1265 NM_194329 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr1-848 chr1 226083390 226083600 + 21.3 0.000 promoter-TSS (NR_146920) promoter-TSS (NR_146920) -80 NR_146920 105373113 Hs.149726 NR_146920 LINC01703 lncPARP1 long intergenic non-protein coding RNA 1703 ncRNA chr11-1320 chr11 74783264 74783474 + 21.3 0.000 intron (NM_001098638, intron 1 of 5) intron (NM_001098638, intron 1 of 5) 34520 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr11-418 chr11 65262223 65262433 + 21.3 0.000 exon (NM_002689, exon 1 of 18) exon (NM_002689, exon 1 of 18) 366 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr3-676 chr3 125403845 125404055 + 21.3 0.000 Intergenic Intergenic -28596 NM_001348428 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr16-343 chr16 1343039 1343249 + 21.3 0.000 intron (NM_001199097, intron 14 of 33) CpG 6947 NM_001199096 8938 Hs.458427 NM_003933 ENSG00000007516 BAIAP3 BAP3 BAI1 associated protein 3 protein-coding chr17-677 chr17 39927456 39927666 + 21.3 0.000 promoter-TSS (NM_139280) promoter-TSS (NM_139280) 40 NM_001320802 94103 Hs.514151 NM_016471 ENSG00000172057 ORMDL3 - ORMDL sphingolipid biosynthesis regulator 3 protein-coding chr15-401 chr15 68620876 68621086 + 21.3 0.000 intron (NM_001190456, intron 1 of 11) intron (NM_001190456, intron 1 of 11) 4441 NM_001190456 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr7-850 chr7 40918833 40919043 + 21.3 0.000 Intergenic Intergenic 61001 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr1-1435 chr1 112809355 112809565 + 21.3 0.000 Intergenic Intergenic 41183 NR_103746 100996702 Hs.632431 NR_103746 ENSG00000215866 LINC01356 - long intergenic non-protein coding RNA 1356 ncRNA chr12-708 chr12 93467624 93467834 + 21.3 0.000 intron (NR_038161, intron 1 of 6) CpG 215 NM_014050 28977 Hs.199579 NM_014050 ENSG00000198015 MRPL42 HSPC204|L31MT|L42MT|MRP-L31|MRP-L42|MRP-S32|MRPL31|MRPS32|PTD007|RPML31|S32MT mitochondrial ribosomal protein L42 protein-coding chr1-1240 chr1 93738310 93738520 + 21.3 0.000 intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) 36968 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr8-402 chr8 18978791 18979001 + 21.3 0.000 intron (NM_015310, intron 1 of 15) intron (NM_015310, intron 1 of 15) 34807 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr4-422 chr4 2818586 2818796 + 21.3 0.000 promoter-TSS (NM_003023) promoter-TSS (NM_003023) -123 NM_003023 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr19-801 chr19 53394931 53395141 + 21.3 0.000 promoter-TSS (NM_001350496) promoter-TSS (NM_001350496) -97 NM_001350495 91661 Hs.657821 NM_001040185 ENSG00000196417 ZNF765 - zinc finger protein 765 protein-coding chr20-167 chr20 2652262 2652472 + 21.3 0.000 promoter-TSS (NR_027700) promoter-TSS (NR_027700) -265 NR_027700 10528 Hs.376064 NM_006392 ENSG00000101361 NOP56 NOL5A|SCA36 NOP56 ribonucleoprotein protein-coding chr22-559 chr22 31036863 31037073 + 21.3 0.000 Intergenic L2a|LINE|L2 -44350 NM_134269 6525 Hs.149098 NM_006932 ENSG00000183963 SMTN - smoothelin protein-coding chr1-2037 chr1 205600300 205600510 + 21.2 0.000 intron (NM_181644, intron 9 of 9) intron (NM_181644, intron 9 of 9) -31100 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr20-126 chr20 36863841 36864051 + 21.2 0.000 promoter-TSS (NM_080627) promoter-TSS (NM_080627) -408 NM_080627 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr10-674 chr10 100286769 100286979 + 21.2 0.000 promoter-TSS (NM_001001342) promoter-TSS (NM_001001342) -162 NM_001282436 282991 Hs.34906 NM_173809 ENSG00000196072 BLOC1S2 BLOS2|BORCS2|CEAP|CEAP11 biogenesis of lysosomal organelles complex 1 subunit 2 protein-coding chr11-1373 chr11 75768495 75768705 + 21.2 0.000 promoter-TSS (NR_046090) promoter-TSS (NR_046090) 47 NR_046090 283214 Hs.591972 NR_046090 ENSG00000247867 LOC283214 - uncharacterized LOC283214 ncRNA chr14-323 chr14 55512549 55512759 + 21.2 0.000 Intergenic Intergenic 67438 NR_027123 100129075 Hs.633724 NR_027123 ENSG00000186615 KTN1-AS1 C14orf33|MYCLo-3 KTN1 antisense RNA 1 ncRNA chr5-652 chr5 10514155 10514365 + 21.2 0.000 intron (NR_134289, intron 1 of 2) intron (NR_134289, intron 1 of 2) -5066 NR_134290 389273 Hs.519206 NR_134289 ENSG00000249160 LINC02213 - long intergenic non-protein coding RNA 2213 ncRNA chr2-967 chr2 226701241 226701451 + 21.2 0.000 Intergenic Intergenic -42553 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr1-2214 chr1 111082508 111082718 + 21.2 0.000 Intergenic L1PA15|LINE|L1 -56770 NM_001007794 10390 Hs.363572 NM_006090 ENSG00000134255 CEPT1 - choline/ethanolamine phosphotransferase 1 protein-coding chr1-1157 chr1 36115358 36115568 + 21.2 0.000 intron (NM_005202, intron 2 of 3) intron (NM_005202, intron 2 of 3) 9759 NM_005202 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr11-1538 chr11 8809506 8809716 + 21.2 0.000 intron (NR_120590, intron 4 of 4) intron (NR_120590, intron 4 of 4) 1063 NM_213618 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr1-926 chr1 113072826 113073036 + 21.2 0.000 promoter-TSS (NM_001312686) promoter-TSS (NM_001312686) 171 NR_103777 100996251 Hs.382067 NR_103777 ENSG00000238198 LRIG2-DT - LRIG2 divergent transcript ncRNA chr20-276 chr20 34709156 34709366 + 21.2 0.000 exon (NM_001329430, exon 3 of 4) exon (NM_001329430, exon 3 of 4) 4542 NM_001329431 58476 Hs.516994 NM_021202 ENSG00000078804 TP53INP2 C20orf110|DOR|PIG-U|PIGU|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding chr11-1104 chr11 73334861 73335071 + 21.2 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -25605 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr17-1144 chr17 78789898 78790108 + 21.2 0.000 Intergenic L2b|LINE|L2 -7661 NM_004762 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr3-391 chr3 185363051 185363261 + 21.2 0.000 promoter-TSS (NM_004721) promoter-TSS (NM_004721) 20 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr11-544 chr11 64855050 64855260 + 21.2 0.000 intron (NM_006795, intron 4 of 4) intron (NM_006795, intron 4 of 4) -10502 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr11-889 chr11 130522384 130522594 + 21.2 0.000 Intergenic Intergenic 73515 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr14-395 chr14 60247938 60248148 + 21.2 0.000 intron (NM_177952, intron 1 of 5) intron (NM_177952, intron 1 of 5) -1178 NM_177951 5494 Hs.130036 NM_021003 ENSG00000100614 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent 1A protein-coding chr3-1202 chr3 29311920 29312130 + 21.2 0.000 intron (NM_001003792, intron 1 of 13) MER103C|DNA|hAT-Charlie 30713 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr17-610 chr17 43900467 43900677 + 21.2 0.000 promoter-TSS (NM_001278376) promoter-TSS (NM_001278376) 52 NM_001278376 4355 Hs.514208 NM_005374 ENSG00000108852 MPP2 DLG2 membrane palmitoylated protein 2 protein-coding chr2-726 chr2 7007883 7008093 + 21.2 0.000 intron (NM_001349184, intron 3 of 8) intron (NM_001349184, intron 3 of 8) 69892 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr11-315 chr11 63813161 63813371 + 21.2 0.000 promoter-TSS (NM_138471) promoter-TSS (NM_138471) -190 NM_138471 144097 Hs.502793 NM_138471 ENSG00000168005 SPINDOC C11orf84|SPIN-DOC spindlin interactor and repressor of chromatin binding protein-coding chr12-410 chr12 632194 632404 + 21.2 0.000 intron (NR_122124, intron 2 of 4) intron (NR_122124, intron 2 of 4) 1408 NR_122124 100049716 Hs.655804 NR_122124 ENSG00000177406 LOC100049716 - uncharacterized LOC100049716 ncRNA chr3-899 chr3 104556773 104556983 + 21.2 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -809835 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr12-451 chr12 124904782 124904992 + 21.2 0.000 Intergenic Intergenic 9763 NM_021009 7316 Hs.520348 NM_021009 ENSG00000150991 UBC HMG20 ubiquitin C protein-coding chr6-735 chr6 150941042 150941252 + 21.2 0.000 intron (NM_001350486, intron 13 of 27) L2b|LINE|L2 -65861 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr5-766 chr5 17113589 17113799 + 21.2 0.000 Intergenic Intergenic 42298 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr2-940 chr2 222860862 222861072 + 21.2 0.000 promoter-TSS (NM_203372) promoter-TSS (NM_203372) -69 NM_001354159 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr8-342 chr8 143956448 143956658 + 21.2 0.000 intron (NM_000445, intron 2 of 32) AluJo|SINE|Alu -2719 NM_201379 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr11-331 chr11 10541059 10541269 + 21.2 0.000 promoter-TSS (NR_034093) promoter-TSS (NR_034093) 23 NM_016422 50862 Hs.44685 NM_016422 ENSG00000110315 RNF141 RFP141|ZFP26|ZNF230 ring finger protein 141 protein-coding chr2-1026 chr2 28276171 28276381 + 21.2 0.000 intron (NM_199193, intron 11 of 13) intron (NM_199193, intron 11 of 13) 34183 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr15-178 chr15 40440815 40441025 + 21.2 0.000 promoter-TSS (NM_014952) promoter-TSS (NM_014952) -33 NM_014952 22893 Hs.22109 NM_014952 ENSG00000140320 BAHD1 - bromo adjacent homology domain containing 1 protein-coding chr12-694 chr12 10009937 10010147 + 21.2 0.000 promoter-TSS (NM_205852) promoter-TSS (NM_205852) -585 NM_001319242 387837 Hs.127937 NM_205852 ENSG00000256660 CLEC12B UNQ5782 C-type lectin domain family 12 member B protein-coding chr1-1368 chr1 39370582 39370792 + 21.2 0.000 intron (NM_012090, intron 45 of 92) intron (NM_012090, intron 45 of 92) -38386 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr8-650 chr8 117847748 117847958 + 21.2 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 73060 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr4-945 chr4 124940374 124940584 + 21.2 0.000 Intergenic Intergenic -227747 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr5-233 chr5 1524052 1524262 + 21.2 0.000 promoter-TSS (NM_024830) promoter-TSS (NM_024830) -197 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr20-229 chr20 35742481 35742691 + 21.2 0.000 promoter-TSS (NM_001323422) promoter-TSS (NM_001323422) -250 NR_136587 9584 Hs.282901 NM_004902 ENSG00000131051 RBM39 CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 RNA binding motif protein 39 protein-coding chr2-1703 chr2 180222762 180222972 + 21.2 0.000 Intergenic LTR33C|LTR|ERVL -215570 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr5-659 chr5 55307724 55307934 + 21.2 0.000 promoter-TSS (NM_001345965) promoter-TSS (NM_001345965) -135 NM_019030 54505 Hs.593268 NM_019030 ENSG00000067248 DHX29 DDX29 DExH-box helicase 29 protein-coding chr2-591 chr2 218806353 218806563 + 21.2 0.000 intron (NM_000784, intron 1 of 8) MER20|DNA|hAT-Charlie -16632 NR_128707 103504730 NR_128707 ENSG00000283639 MIR9500 hsa-mir-9500 microRNA 9500 ncRNA chr14-315 chr14 101980739 101980949 + 21.2 0.000 intron (NM_001376, intron 5 of 77) intron (NM_001376, intron 5 of 77) 16271 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr15-528 chr15 59222310 59222520 + 21.2 0.000 intron (NM_004998, intron 9 of 27) intron (NM_004998, intron 9 of 27) 15572 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr1-2843 chr1 98794451 98794661 + 21.2 0.000 Intergenic Intergenic 132835 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr17-441 chr17 67377162 67377372 + 21.2 0.000 promoter-TSS (NM_012417) promoter-TSS (NM_012417) -14 NM_012417 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein cytoplasmic 1 protein-coding chr10-1106 chr10 87640140 87640350 + 21.2 0.000 Intergenic HERVL-int|LTR|ERVL -19633 NM_004670 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr18-423 chr18 76445444 76445654 + 21.2 0.000 intron (NM_014643, intron 2 of 6) intron (NM_014643, intron 2 of 6) -46103 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr17-1615 chr17 78763590 78763800 + 21.2 0.000 intron (NM_004762, intron 1 of 12) MER44A|DNA|TcMar-Tigger 18513 NM_001365039 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr3-629 chr3 38459169 38459379 + 21.2 0.000 intron (NM_001106, intron 1 of 10) intron (NM_001106, intron 1 of 10) -4454 NR_028389 100128640 Hs.570596 NR_028389 ENSG00000229589 ACVR2B-AS1 - ACVR2B antisense RNA 1 ncRNA chrX-142 chrX 48597894 48598104 + 21.2 0.000 exon (NM_001347217, exon 2 of 10) exon (NM_001347217, exon 2 of 10) 507 NM_001347217 64743 Hs.521973 NM_017883 ENSG00000101940 WDR13 MG21 WD repeat domain 13 protein-coding chr12-965 chr12 1581428 1581638 + 21.2 0.000 intron (NM_152441, intron 1 of 1) intron (NM_152441, intron 1 of 1) 13048 NM_152441 144699 Hs.367956 NM_152441 ENSG00000171823 FBXL14 Fbl14 F-box and leucine rich repeat protein 14 protein-coding chr11-771 chr11 29185681 29185891 + 21.2 0.000 Intergenic Intergenic -408627 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr8-778 chr8 43199309 43199519 + 21.2 0.000 exon (NM_001363229, exon 17 of 17) exon (NM_001363229, exon 17 of 17) 58950 NM_001363228 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr19-565 chr19 10915705 10915915 + 21.2 0.000 intron (NM_001370089, intron 6 of 14) intron (NM_001370089, intron 6 of 14) 12829 NM_001321439 78992 Hs.164026 NM_024029 ENSG00000130733 YIPF2 FinGER2 Yip1 domain family member 2 protein-coding chr11-803 chr11 120300101 120300311 + 21.2 0.000 intron (NM_001244682, intron 5 of 12) intron (NM_001244682, intron 5 of 12) -25093 NM_001198673 219902 Hs.643516 NM_174926 ENSG00000181264 TLCD5 TMEM136 TLC domain containing 5 protein-coding chr7-521 chr7 47573983 47574193 + 21.2 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 8023 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr9-812 chr9 134138962 134139172 + 21.2 0.000 promoter-TSS (NM_052821) promoter-TSS (NM_052821) -725 NM_052821 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr18-134 chr18 3512006 3512216 + 21.2 0.000 intron (NM_001242762, intron 7 of 9) intron (NM_001242762, intron 7 of 9) 45861 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr2-878 chr2 12155800 12156010 + 21.2 0.000 intron (NR_110196, intron 2 of 5) intron (NR_110196, intron 2 of 5) -43225 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr14-361 chr14 74620560 74620770 + 21.2 0.000 Intergenic Intergenic -8428 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr16-839 chr16 87636337 87636547 + 21.2 0.000 intron (NM_020655, intron 1 of 4) intron (NM_020655, intron 1 of 4) 33934 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr6-432 chr6 98947688 98947898 + 21.2 0.000 intron (NM_001278716, intron 1 of 9) CpG 153 NR_103836 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chrX-95 chrX 74420740 74420950 + 21.2 0.000 promoter-TSS (NM_006517) promoter-TSS (NM_006517) -648 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr12-839 chr12 105934283 105934493 + 21.2 0.000 Intergenic Intergenic 205645 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr12-746 chr12 10395717 10395927 + 21.2 0.000 intron (NM_001199805, intron 4 of 12) LTR41C|LTR|ERVL -5781 NM_007360 22914 Hs.387787 NM_007360 ENSG00000213809 KLRK1 CD314|D12S2489E|KLR|NKG2-D|NKG2D killer cell lectin like receptor K1 protein-coding chr6-509 chr6 18405781 18405991 + 21.2 0.000 intron (NM_182757, intron 2 of 7) intron (NM_182757, intron 2 of 7) 18536 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr6-89 chr6 100881295 100881505 + 21.2 0.000 promoter-TSS (NM_001284271) promoter-TSS (NM_001284271) -28 NM_001284271 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr7-339 chr7 149497633 149497843 + 21.2 0.000 promoter-TSS (NM_001163474) promoter-TSS (NM_001163474) 69 NM_001163474 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr10-792 chr10 98478970 98479180 + 21.2 0.000 intron (NM_001166246, intron 11 of 12) intron (NM_001166246, intron 11 of 12) -32112 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr6-907 chr6 137241523 137241733 + 21.2 0.000 Intergenic Intergenic -22198 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr15-969 chr15 49247627 49247837 + 21.2 0.000 intron (NM_001289030, intron 6 of 10) intron (NM_001289030, intron 6 of 10) 77485 NM_002044 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr20-418 chr20 17922953 17923163 + 21.2 0.000 Intergenic MLT2B1|LTR|ERVL 39888 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr5-524 chr5 177403902 177404112 + 21.2 0.000 exon (NM_000505, exon 10 of 14) exon (NM_000505, exon 10 of 14) -3346 NM_001029886 345456 Hs.130196 NM_001029886 ENSG00000196570 PFN3 - profilin 3 protein-coding chr7-345 chr7 66844858 66845068 + 21.2 0.000 promoter-TSS (NR_003934) promoter-TSS (NR_003934) -137 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseudogene 1 pseudo chr11-897 chr11 28836396 28836606 + 21.2 0.000 Intergenic L2a|LINE|L2 -358953 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr19-1405 chr19 43224271 43224481 + 21.2 0.000 intron (NR_033888, intron 4 of 8) LTR8B|LTR|ERV1 -18602 NM_001276495 5672 Hs.711363 NM_002780 ENSG00000243137 PSG4 PSBG-4|PSBG-9|PSG9 pregnancy specific beta-1-glycoprotein 4 protein-coding GL000225.1-23 GL000225.1 81891 82101 + 21.2 0.000 NA NA NA NA chr13-455 chr13 110338914 110339124 + 21.2 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) -1939 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr16-684 chr16 12801542 12801752 + 21.2 0.000 intron (NM_018340, intron 1 of 3) L1M5|LINE|L1 2240 NM_018340 55313 Hs.460002 NM_018340 ENSG00000103381 CPPED1 CSTP1 calcineurin like phosphoesterase domain containing 1 protein-coding chr12-1535 chr12 86275103 86275313 + 21.2 0.000 intron (NM_001351286, intron 4 of 7) intron (NM_001351286, intron 4 of 7) -17909 NM_001351287 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding chr7-677 chr7 95859548 95859758 + 21.2 0.000 intron (NM_004411, intron 5 of 16) L1M3e|LINE|L1 87147 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr10-703 chr10 77104496 77104706 + 21.2 0.000 intron (NM_001271519, intron 9 of 28) intron (NM_001271519, intron 9 of 28) -36230 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr18-183 chr18 70044690 70044900 + 21.2 0.000 intron (NM_001318520, intron 39 of 47) MER44B|DNA|TcMar-Tigger -87996 NM_006566 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr17-1350 chr17 47947041 47947251 + 21.2 0.000 3' UTR (NM_018129, exon 7 of 7) 3' UTR (NM_018129, exon 7 of 7) 5575 NM_018129 55163 Hs.631742 NM_018129 ENSG00000108439 PNPO HEL-S-302|PDXPO pyridoxamine 5'-phosphate oxidase protein-coding chr2-795 chr2 222594718 222594928 + 21.2 0.000 intron (NR_130154, intron 17 of 17) intron (NR_130154, intron 17 of 17) 61269 NM_005687 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chr7-559 chr7 50826905 50827115 + 21.2 0.000 Intergenic L1MD3|LINE|L1 -33557 NM_001371008 chr1-631 chr1 59296725 59296935 + 21.2 0.000 promoter-TSS (NM_001350797) promoter-TSS (NM_001350797) 17 NM_001350798 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr22-557 chr22 28977531 28977741 + 21.2 0.000 intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 53840 NR_046851 100874123 Hs.674708 NR_046851 ENSG00000177993 ZNRF3-AS1 - ZNRF3 antisense RNA 1 ncRNA chr2-2046 chr2 152571407 152571617 + 21.2 0.000 intron (NM_052905, intron 6 of 25) intron (NM_052905, intron 6 of 25) 145949 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr10-1066 chr10 114767436 114767646 + 21.2 0.000 intron (NR_120628, intron 1 of 2) intron (NR_120628, intron 1 of 2) 763 NM_001322884 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr10-1185 chr10 87157927 87158137 + 21.2 0.000 intron (NM_001330112, intron 3 of 9) intron (NM_001330112, intron 3 of 9) 62826 NM_019054 54537 Hs.500419 NM_019054 ENSG00000122376 SHLD2 FAM35A|FAM35A1|RINN2|bA163M19.1 shieldin complex subunit 2 protein-coding chr19-702 chr19 43533195 43533405 + 21.2 0.000 5' UTR (NM_174945, exon 1 of 4) 5' UTR (NM_174945, exon 1 of 4) 112 NM_174945 284346 Hs.213534 NM_174945 ENSG00000176472 ZNF575 - zinc finger protein 575 protein-coding chr11-1031 chr11 128716643 128716853 + 21.2 0.000 intron (NM_002017, intron 1 of 8) intron (NM_002017, intron 1 of 8) -20725 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr6-697 chr6 39432613 39432823 + 21.2 0.000 intron (NM_001289021, intron 12 of 21) intron (NM_001289021, intron 12 of 21) -1328 NM_001289024 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr15-625 chr15 62324438 62324648 + 21.2 0.000 Intergenic Intergenic -18486 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr11-710 chr11 1383020 1383230 + 21.2 0.000 Intergenic CpG -6809 NR_046331 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr19-1549 chr19 46856703 46856913 + 21.2 0.000 Intergenic L2b|LINE|L2 -4189 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr1-1605 chr1 79323452 79323662 + 21.2 0.000 Intergenic Intergenic -316827 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr9-222 chr9 136949910 136950120 + 21.2 0.000 Intergenic CpG -2258 NM_178536 286256 Hs.440519 NM_178536 ENSG00000184925 LCN12 - lipocalin 12 protein-coding chr14-463 chr14 67680170 67680380 + 21.2 0.000 intron (NM_016026, intron 6 of 6) intron (NM_016026, intron 6 of 6) -5643 NM_006370 10490 Hs.741177 NM_006370 ENSG00000100568 VTI1B VTI1|VTI1-LIKE|VTI1L|VTI2|v-SNARE|vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding chr20-324 chr20 31699326 31699536 + 21.2 0.000 intron (NR_134257, intron 1 of 2) intron (NR_134257, intron 1 of 2) -22076 NR_131907 103021294 NR_131907 ENSG00000281376 ABALON INXS apoptotic BCL2L1-antisense long non-coding RNA ncRNA chr6-754 chr6 99013165 99013375 + 21.2 0.000 Intergenic Intergenic -65264 NM_012160 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr2-2197 chr2 51954047 51954257 + 21.2 0.000 intron (NR_135237, intron 7 of 10) intron (NR_135237, intron 7 of 10) -416496 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr5-521 chr5 140557435 140557645 + 21.2 0.000 promoter-TSS (NM_001253764) promoter-TSS (NM_001253764) -84 NR_045587 10011 Hs.653135 NM_001035235 ENSG00000213523 SRA1 SRA|SRAP|STRAA1|pp7684 steroid receptor RNA activator 1 protein-coding chr9-917 chr9 128972981 128973191 + 21.2 0.000 intron (NM_015354, intron 11 of 43) intron (NM_015354, intron 11 of 43) -25353 NM_014908 22845 Hs.531563 NM_014908 ENSG00000175283 DOLK CDG1M|DK|DK1|SEC59|TMEM15 dolichol kinase protein-coding chr11-1021 chr11 82080248 82080458 + 21.2 0.000 intron (NR_120571, intron 5 of 7) intron (NR_120571, intron 5 of 7) -189517 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr19-1331 chr19 3122916 3123126 + 21.2 0.000 3' UTR (NM_002067, exon 7 of 7) 3' UTR (NM_002067, exon 7 of 7) -13012 NM_002068 2769 Hs.73797 NM_002068 ENSG00000060558 GNA15 GNA16 G protein subunit alpha 15 protein-coding chr2-1441 chr2 234823950 234824160 + 21.2 0.000 Intergenic Intergenic -127962 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr2-1526 chr2 106511706 106511916 + 21.2 0.000 TTS (NM_001349727) TTS (NM_001349727) 24447 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr17-640 chr17 7704969 7705179 + 21.2 0.000 promoter-TSS (NM_001406) promoter-TSS (NM_001406) -128 NM_001406 1949 Hs.26988 NM_001406 ENSG00000108947 EFNB3 EFL6|EPLG8|LERK8 ephrin B3 protein-coding chr17-604 chr17 80415183 80415393 + 21.2 0.000 promoter-TSS (NR_148044) promoter-TSS (NR_148044) -120 NR_029376 100294362 Hs.657519 NR_029376 ENSG00000263069 LOC100294362 - uncharacterized LOC100294362 ncRNA chr2-566 chr2 111883749 111883959 + 21.2 0.000 intron (NM_022662, intron 1 of 47) CpG 339 NM_022662 64682 Hs.436527 NM_022662 ENSG00000153107 ANAPC1 APC1|MCPR|TSG24 anaphase promoting complex subunit 1 protein-coding chr12-1036 chr12 62631521 62631731 + 21.2 0.000 Intergenic Intergenic 27940 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr1-886 chr1 36386616 36386826 + 21.2 0.000 promoter-TSS (NM_001282547) promoter-TSS (NM_001282547) -797 NM_001282546 83931 Hs.471768 NM_032017 ENSG00000196182 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding chr14-372 chr14 68695335 68695545 + 21.2 0.000 Intergenic Intergenic -66653 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr10-967 chr10 77428814 77429024 + 21.2 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 78047 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr9-1085 chr9 6383766 6383976 + 21.2 0.000 Intergenic MER61-int|LTR|ERV1 -29280 NR_046386 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr21-111 chr21 36150222 36150432 + 21.2 0.000 intron (NR_038892, intron 1 of 3) intron (NR_038892, intron 1 of 3) 5981 NR_038893 100506428 Hs.651214 NR_038892 ENSG00000236830 CBR3-AS1 PlncRNA-1|PlncRNA1 CBR3 antisense RNA 1 ncRNA chr13-421 chr13 25005133 25005343 + 21.2 0.000 Intergenic Intergenic -36769 NR_026730 646405 Hs.620592 NM_001126062 TPTE2P1 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 pseudo chr16-387 chr16 67151113 67151323 + 21.2 0.000 promoter-TSS (NM_033309) promoter-TSS (NM_033309) -220 NM_033309 84752 Hs.744158 NM_033309 ENSG00000237172 B3GNT9 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 protein-coding chr1-1114 chr1 15949769 15949979 + 21.2 0.000 intron (NM_001287603, intron 2 of 15) intron (NM_001287603, intron 2 of 15) 26258 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr21-318 chr21 29164426 29164636 + 21.2 0.000 intron (NM_001286620, intron 4 of 4) LFSINE_Vert|SINE|tRNA 18954 NM_001286624 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr3-854 chr3 50008880 50009090 + 21.2 0.000 intron (NM_001349194, intron 3 of 17) MIRb|SINE|MIR 68835 NM_001349190 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr19-1299 chr19 4120591 4120801 + 21.2 0.000 intron (NM_030662, intron 1 of 10) intron (NM_030662, intron 1 of 10) 3433 NM_030662 5605 Hs.465627 NM_030662 ENSG00000126934 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding chr13-86 chr13 114282040 114282250 + 21.2 0.000 promoter-TSS (NM_001353648) promoter-TSS (NM_001353648) 234 NR_148495 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3A regulator of nonsense mediated mRNA decay protein-coding chr1-1574 chr1 20495142 20495352 + 21.2 0.000 Intergenic MIR|SINE|MIR -9037 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding chr5-699 chr5 55604847 55605057 + 21.2 0.000 Intergenic Intergenic -69874 NM_176895 8611 Hs.696231 NM_003711 ENSG00000067113 PLPP1 LLP1a|LPP1|PAP-2a|PAP2|PPAP2A phospholipid phosphatase 1 protein-coding chr11-1646 chr11 107102385 107102595 + 21.2 0.000 Intergenic L1PB3|LINE|L1 -84014 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr16-842 chr16 559525 559735 + 21.2 0.000 promoter-TSS (NM_145270) promoter-TSS (NM_145270) -764 NM_145270 146325 Hs.632220 NM_145270 ENSG00000161992 PRR35 C16orf11|LA16c-366D1.2 proline rich 35 protein-coding chr17-611 chr17 44829488 44829698 + 21.2 0.000 intron (NM_001080383, intron 1 of 2) CpG 694 NM_005497 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr19-625 chr19 19732979 19733189 + 21.2 0.000 promoter-TSS (NM_021030) promoter-TSS (NM_021030) 28 NM_021030 7561 Hs.659932 NM_021030 ENSG00000105708 ZNF14 GIOT-4|KOX6 zinc finger protein 14 protein-coding chr12-252 chr12 21501375 21501585 + 21.1 0.000 promoter-TSS (NM_016072) promoter-TSS (NM_016072) 155 NM_002907 5965 Hs.235069 NM_002907 ENSG00000004700 RECQL RECQL1|RecQ1 RecQ like helicase protein-coding GL000219.1-3 GL000219.1 40351 40561 + 21.1 0.000 NA NA NA NA chr1-670 chr1 19882286 19882496 + 21.1 0.000 promoter-TSS (NM_015207) promoter-TSS (NM_015207) -4 NM_015207 23252 Hs.374987 NM_015207 ENSG00000169914 OTUD3 DUBA4 OTU deubiquitinase 3 protein-coding chr10-1092 chr10 52226464 52226674 + 21.1 0.000 intron (NM_001098512, intron 9 of 17) intron (NM_001098512, intron 9 of 17) 87559 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr2-2350 chr2 203454009 203454219 + 21.1 0.000 intron (NM_001329728, intron 12 of 15) intron (NM_001329728, intron 12 of 15) 81187 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr14-187 chr14 101964311 101964521 + 21.1 0.000 promoter-TSS (NM_001376) promoter-TSS (NM_001376) -157 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr7-502 chr7 75914831 75915041 + 21.1 0.000 promoter-TSS (NR_039795) promoter-TSS (NR_039795) -219 NM_000941 5447 Hs.354056 NM_000941 ENSG00000127948 POR CPR|CYPOR|P450R cytochrome p450 oxidoreductase protein-coding chr2-1051 chr2 158191132 158191342 + 21.1 0.000 intron (NM_138803, intron 11 of 13) intron (NM_138803, intron 11 of 13) 24587 NR_038850 554201 Hs.570262 NR_038850 ENSG00000227480 CCDC148-AS1 - CCDC148 antisense RNA 1 ncRNA chr11-554 chr11 3905417 3905627 + 21.1 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 49460 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr2-911 chr2 180983799 180984009 + 21.1 0.000 intron (NM_001278555, intron 2 of 5) intron (NM_001278555, intron 2 of 5) 2780 NM_001278554 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr12-523 chr12 54370371 54370581 + 21.1 0.000 exon (NM_001290001, exon 6 of 6) exon (NM_001290001, exon 6 of 6) -5990 NM_020370 53831 Hs.306199 NM_020370 ENSG00000139572 GPR84 EX33|GPCR4 G protein-coupled receptor 84 protein-coding chr1-1175 chr1 206472625 206472835 + 21.1 0.000 intron (NM_001193321, intron 2 of 20) intron (NM_001193321, intron 2 of 20) -2073 NR_106919 102466202 NR_106919 ENSG00000278465 MIR6769B hsa-mir-6769b microRNA 6769b ncRNA chr9-699 chr9 23826235 23826445 + 21.1 0.000 promoter-TSS (NM_001351472) promoter-TSS (NM_001351472) -100 NM_001351477 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding chr1-1256 chr1 221418483 221418693 + 21.1 0.000 Intergenic Intergenic -82292 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr19-895 chr19 17336574 17336784 + 21.1 0.000 promoter-TSS (NM_032620) promoter-TSS (NM_032620) -874 NM_032620 84705 Hs.334885 NM_032620 ENSG00000130299 GTPBP3 COXPD23|GTPBG3|MSS1|MTGP1|THDF1 GTP binding protein 3, mitochondrial protein-coding chr10-682 chr10 132187487 132187697 + 21.1 0.000 intron (NM_006426, intron 1 of 13) CpG-3556 644 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr3-789 chr3 123641142 123641352 + 21.1 0.000 intron (NM_001321309, intron 26 of 32) intron (NM_001321309, intron 26 of 32) -20699 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr7-1188 chr7 44633975 44634185 + 21.1 0.000 intron (NM_002541, intron 2 of 22) intron (NM_002541, intron 2 of 22) 27453 NM_001003941 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr18-174 chr18 8982695 8982905 + 21.1 0.000 Intergenic Intergenic -119899 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr12-875 chr12 54411407 54411617 + 21.1 0.000 intron (NR_120486, intron 3 of 3) L2b|LINE|L2 7754 NM_002205 3678 Hs.505654 NM_002205 ENSG00000161638 ITGA5 CD49e|FNRA|VLA-5|VLA5A integrin subunit alpha 5 protein-coding chr11-837 chr11 78350806 78351016 + 21.1 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) -9031 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr1-554 chr1 93846162 93846372 + 21.1 0.000 promoter-TSS (NR_030621) promoter-TSS (NR_030621) -565 NR_030621 100126348 NR_030621 ENSG00000211575 MIR760 MIRN760|hsa-mir-760|mir-760 microRNA 760 ncRNA chr3-1006 chr3 63872289 63872499 + 21.1 0.000 intron (NM_000333, intron 1 of 12) MLT1H|LTR|ERVL-MaLR 7837 NM_000333 6314 Hs.476595 NM_000333 ENSG00000163635 ATXN7 ADCAII|OPCA3|SCA7|SGF73 ataxin 7 protein-coding chr1-1530 chr1 109370661 109370871 + 21.1 0.000 intron (NM_002959, intron 1 of 19) L2c|LINE|L2 22591 NM_001205228 6272 Hs.485195 NM_002959 ENSG00000134243 SORT1 Gp95|LDLCQ6|NT3|NTR3 sortilin 1 protein-coding chr18-214 chr18 79791593 79791803 + 21.1 0.000 Intergenic Intergenic -71970 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr19-1372 chr19 1842807 1843017 + 21.1 0.000 intron (NM_020695, intron 1 of 15) intron (NM_020695, intron 1 of 15) 5571 NM_020695 57455 Hs.192477 NM_020695 ENSG00000079313 REXO1 ELOABP1|EloA-BP1|REX1|TCEB3BP1 RNA exonuclease 1 homolog protein-coding chr18-104 chr18 75203832 75204042 + 21.1 0.000 intron (NM_175907, intron 1 of 1) intron (NM_175907, intron 1 of 1) 1576 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr6-738 chr6 166553536 166553746 + 21.1 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -8951 NM_001318938 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr11-1842 chr11 76025181 76025391 + 21.1 0.000 intron (NM_003369, intron 12 of 14) intron (NM_003369, intron 12 of 14) 181216 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr3-989 chr3 21718220 21718430 + 21.1 0.000 intron (NM_024697, intron 1 of 7) intron (NM_024697, intron 1 of 7) 32885 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr17-1145 chr17 79036729 79036939 + 21.1 0.000 intron (NM_198593, intron 1 of 3) intron (NM_198593, intron 1 of 3) 2535 NM_198593 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and TNF related 1 protein-coding chr1-1478 chr1 115783056 115783266 + 21.1 0.000 Intergenic Intergenic -14356 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr16-482 chr16 234824 235034 + 21.1 0.000 intron (NM_032039, intron 1 of 12) CpG 108 NM_001284497 83986 Hs.513225 NM_032039 ENSG00000167930 FAM234A C16orf9|ITFG3|gs19 family with sequence similarity 234 member A protein-coding chr10-474 chr10 75111308 75111518 + 21.1 0.000 promoter-TSS (NM_144660) promoter-TSS (NM_144660) -243 NM_144660 142891 Hs.744986 NM_144660 ENSG00000156671 SAMD8 HEL-177|SMSr sterile alpha motif domain containing 8 protein-coding chr12-469 chr12 15911312 15911522 + 21.1 0.000 promoter-TSS (NM_001300779) promoter-TSS (NM_001300779) 85 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr9-720 chr9 21832085 21832295 + 21.1 0.000 intron (NM_002451, intron 4 of 7) intron (NM_002451, intron 4 of 7) 29554 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr11-1677 chr11 28566704 28566914 + 21.1 0.000 Intergenic Intergenic -89261 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr1-2798 chr1 1827148 1827358 + 21.1 0.000 intron (NM_001282539, intron 1 of 10) intron (NM_001282539, intron 1 of 10) -47222 NM_001353641 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr17-639 chr17 5111709 5111919 + 21.1 0.000 promoter-TSS (NR_135657) promoter-TSS (NR_135657) -121 NR_135658 101928000 Hs.660048 NR_135657 ENSG00000234327 LOC101928000 - uncharacterized LOC101928000 ncRNA chr20-338 chr20 13784817 13785027 + 21.1 0.000 promoter-TSS (NM_001352403) promoter-TSS (NM_001352403) 11 NM_001276380 51575 Hs.369284 NM_016649 ENSG00000089048 ESF1 ABTAP|C20orf6|HDCMC28P|bA526K24.1 ESF1 nucleolar pre-rRNA processing protein homolog protein-coding chr15-382 chr15 68729651 68729861 + 21.1 0.000 Intergenic Intergenic 72169 NR_036197 100422971 NR_036197 ENSG00000265195 MIR4312 - microRNA 4312 ncRNA chr15-375 chr15 82082660 82082870 + 21.1 0.000 Intergenic Intergenic -5829 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr2-943 chr2 237874650 237874860 + 21.1 0.000 intron (NM_001308353, intron 2 of 3) intron (NM_001308353, intron 2 of 3) 15132 NM_001308353 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr12-426 chr12 42144801 42145011 + 21.1 0.000 promoter-TSS (NM_001099650) promoter-TSS (NM_001099650) -32 NM_173601 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr19-837 chr19 18113032 18113242 + 21.1 0.000 intron (NM_015016, intron 2 of 26) intron (NM_015016, intron 2 of 26) -14321 NM_001290024 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr3-741 chr3 128080438 128080648 + 21.1 0.000 TTS (NM_001319084) TTS (NM_001319084) 4733 NR_046645 100874089 Hs.581603 NR_046645 ENSG00000239608 RUVBL1-AS1 - RUVBL1 antisense RNA 1 ncRNA chr6-294 chr6 149863851 149864061 + 21.1 0.000 exon (NM_032832, exon 1 of 7) exon (NM_032832, exon 1 of 7) 403 NM_032832 84918 Hs.408355 NM_032832 ENSG00000120256 LRP11 MANSC3|bA350J20.3 LDL receptor related protein 11 protein-coding chr12-567 chr12 3034187 3034397 + 21.1 0.000 intron (NM_201443, intron 8 of 10) intron (NM_201443, intron 8 of 10) -43063 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr10-888 chr10 96579991 96580201 + 21.1 0.000 intron (NM_020123, intron 1 of 14) intron (NM_020123, intron 1 of 14) 6916 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr1-2956 chr1 97999444 97999654 + 21.1 0.000 intron (NR_046105, intron 3 of 4) L2a|LINE|L2 45802 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr8-673 chr8 70564774 70564984 + 21.1 0.000 Intergenic L1PB2|LINE|L1 42790 NM_001317805 23471 Hs.491988 NM_014294 ENSG00000067167 TRAM1 PNAS8|TRAM|TRAMP translocation associated membrane protein 1 protein-coding chr17-1529 chr17 76399180 76399390 + 21.1 0.000 intron (NM_022066, intron 9 of 17) intron (NM_022066, intron 9 of 17) 14007 NM_001142602 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr14-651 chr14 22584209 22584419 + 21.1 0.000 intron (NM_001344, intron 1 of 2) L2c|LINE|L2 4910 NM_001344 1603 Hs.82890 NM_001344 ENSG00000129562 DAD1 OST2 defender against cell death 1 protein-coding chr1-1433 chr1 101238720 101238930 + 21.1 0.000 5' UTR (NM_001400, exon 2 of 2) 5' UTR (NM_001400, exon 2 of 2) 2076 NM_001400 1901 Hs.154210 NM_001400 ENSG00000170989 S1PR1 CD363|CHEDG1|D1S3362|ECGF1|EDG-1|EDG1|S1P1 sphingosine-1-phosphate receptor 1 protein-coding chr9-765 chr9 115157331 115157541 + 21.1 0.000 intron (NR_163556, intron 1 of 7) intron (NR_163556, intron 1 of 7) 15618 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr3-547 chr3 56980946 56981156 + 21.1 0.000 intron (NM_001128615, intron 2 of 12) intron (NM_001128615, intron 2 of 12) 41011 NR_046572 100874200 Hs.549631 NR_046572 ENSG00000240198 ARHGEF3-AS1 - ARHGEF3 antisense RNA 1 ncRNA chr3-978 chr3 153160633 153160843 + 21.1 0.000 Intergenic CpG -1488 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr17-1000 chr17 76584926 76585136 + 21.1 0.000 intron (NM_006456, intron 1 of 8) GA-rich|Low_complexity|Low_complexity 829 NM_006456 10610 Hs.592105 NM_006456 ENSG00000070731 ST6GALNAC2 SAITL1|SIAT7|SIAT7B|SIATL1|ST6GalNAII|STHM ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein-coding chr17-832 chr17 67836350 67836560 + 21.1 0.000 intron (NM_182641, intron 1 of 27) intron (NM_182641, intron 1 of 27) 10952 NM_004459 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr2-996 chr2 178195140 178195350 + 21.1 0.000 intron (NM_001201480, intron 1 of 25) CpG 733 NM_032523 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr8-662 chr8 24218723 24218933 + 21.1 0.000 Intergenic Intergenic -75212 NM_021777 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr2-1665 chr2 75100435 75100645 + 21.1 0.000 intron (NM_015727, intron 2 of 3) L2c|LINE|L2 9728 NR_049796 100846995 NR_049796 ENSG00000263909 MIR5000 - microRNA 5000 ncRNA chr4-855 chr4 74231205 74231415 + 21.1 0.000 intron (NM_001144978, intron 6 of 7) intron (NM_001144978, intron 6 of 7) 73192 NR_147097 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr11-1746 chr11 122709152 122709362 + 21.1 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 53535 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr15-300 chr15 84980445 84980655 + 21.1 0.000 promoter-TSS (NM_001243137) promoter-TSS (NM_001243137) 83 NM_001243137 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr1-2204 chr1 79711265 79711475 + 21.1 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -704640 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr1-715 chr1 86396238 86396448 + 21.1 0.000 promoter-TSS (NM_001366783) promoter-TSS (NM_001366783) -1 NM_001184766 57489 Hs.149360 NM_020729 ENSG00000122417 ODF2L - outer dense fiber of sperm tails 2 like protein-coding chr1-795 chr1 172639493 172639703 + 21.1 0.000 Intergenic Intergenic -19410 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr2-755 chr2 172285234 172285444 + 21.1 0.000 Intergenic Intergenic -141997 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr3-758 chr3 29347009 29347219 + 21.1 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 65802 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr9-375 chr9 33161223 33161433 + 21.1 0.000 intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -5620 NR_108110 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr10-1105 chr10 86934642 86934852 + 21.1 0.000 TTS (NM_024756) TTS (NM_024756) -21012 NM_001330120 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chr3-1492 chr3 119184800 119185010 + 21.1 0.000 intron (NM_006952, intron 1 of 7) intron (NM_006952, intron 1 of 7) 11307 NM_006952 7348 Hs.271580 NM_006952 ENSG00000114638 UPK1B TSPAN20|UPIB|UPK1 uroplakin 1B protein-coding chr10-817 chr10 93406869 93407079 + 21.1 0.000 intron (NM_013451, intron 7 of 53) intron (NM_013451, intron 7 of 53) 75360 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr22-378 chr22 41524084 41524294 + 21.1 0.000 intron (NM_001098, intron 12 of 17) MIR|SINE|MIR 20281 NM_001018050 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding chr17-884 chr17 30116606 30116816 + 21.1 0.000 promoter-TSS (NM_001261467) promoter-TSS (NM_001261467) -96 NM_001261467 84081 Hs.462663 NM_032141 ENSG00000126653 NSRP1 CCDC55|HSPC095|NSrp70 nuclear speckle splicing regulatory protein 1 protein-coding chr16-488 chr16 30407394 30407604 + 21.1 0.000 promoter-TSS (NM_016643) promoter-TSS (NM_016643) 85 NM_016643 51333 Hs.148584 NM_016643 ENSG00000179965 ZNF771 DSC43 zinc finger protein 771 protein-coding chr17-956 chr17 60187425 60187635 + 21.1 0.000 intron (NM_032582, intron 29 of 33) intron (NM_032582, intron 29 of 33) 37557 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr10-1381 chr10 31404661 31404871 + 21.1 0.000 intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) -5011 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr6-660 chr6 53033855 53034065 + 21.1 0.000 intron (NM_014920, intron 3 of 13) intron (NM_014920, intron 3 of 13) 27842 NM_016513 22858 Hs.417022 NM_014920 ENSG00000112144 ICK ECO|EJM10|LCK2|MRK intestinal cell kinase protein-coding chr1-512 chr1 160343231 160343441 + 21.1 0.000 promoter-TSS (NM_001349729) promoter-TSS (NM_001349729) -47 NM_001290184 23385 Hs.517249 NM_015331 ENSG00000162736 NCSTN ATAG1874 nicastrin protein-coding chr19-513 chr19 1026352 1026562 + 21.1 0.000 promoter-TSS (NM_001303499) promoter-TSS (NM_001303499) -151 NM_004368 1265 Hs.651512 NM_004368 ENSG00000064666 CNN2 - calponin 2 protein-coding chr19-784 chr19 49512614 49512824 + 21.1 0.000 promoter-TSS (NM_001136019) promoter-TSS (NM_001136019) 58 NM_001136019 2217 Hs.111903 NM_004107 ENSG00000104870 FCGRT FCRN|alpha-chain Fc fragment of IgG receptor and transporter protein-coding chr7-1058 chr7 156751322 156751532 + 21.1 0.000 intron (NM_001350953, intron 9 of 17) L2a|LINE|L2 107626 NM_001308274 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr8-283 chr8 24668833 24669043 + 21.1 0.000 Intergenic Intergenic -120320 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr5-633 chr5 172107679 172107889 + 21.1 0.000 exon (NM_005990, exon 5 of 19) exon (NM_005990, exon 5 of 19) 80440 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr16-1083 chr16 66028579 66028789 + 21.1 0.000 Intergenic Intergenic -338007 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr14-332 chr14 23115145 23115355 + 21.1 0.000 Intergenic Intergenic 4361 NM_001805 1053 Hs.558308 NM_001805 ENSG00000092067 CEBPE C/EBP-epsilon|CRP1 CCAAT enhancer binding protein epsilon protein-coding chr13-262 chr13 77016318 77016528 + 21.1 0.000 intron (NM_012158, intron 3 of 4) intron (NM_012158, intron 3 of 4) 10736 NM_012158 26224 Hs.508284 NM_012158 ENSG00000005812 FBXL3 FBL3|FBL3A|FBXL3A|IDDSFAS F-box and leucine rich repeat protein 3 protein-coding chr2-1263 chr2 36408481 36408691 + 21.1 0.000 intron (NM_016441, intron 2 of 16) intron (NM_016441, intron 2 of 16) 52808 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr9-650 chr9 95048944 95049154 + 21.1 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -16301 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr8-446 chr8 18753724 18753934 + 21.1 0.000 intron (NM_015310, intron 9 of 15) Tigger15a|DNA|TcMar-Tigger 55038 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr1-904 chr1 227318529 227318739 + 21.1 0.000 promoter-TSS (NM_001366010) promoter-TSS (NM_001366010) -142 NM_001366011 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr16-743 chr16 85172223 85172433 + 21.1 0.000 Intergenic Intergenic 35178 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr10-416 chr10 73940747 73940957 + 21.1 0.000 Intergenic Intergenic -18075 NR_160937 414236 Hs.585453 NM_001001791 ENSG00000222047 C10orf55 - chromosome 10 open reading frame 55 ncRNA chr12-865 chr12 45233045 45233255 + 21.1 0.000 intron (NM_001025356, intron 1 of 19) intron (NM_001025356, intron 1 of 19) 17055 NM_001142679 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr4-176 chr4 102827278 102827488 + 21.1 0.000 promoter-TSS (NR_131186) promoter-TSS (NR_131186) 168 NM_181891 7323 Hs.518773 NM_003340 ENSG00000109332 UBE2D3 E2(17)KB3|UBC4/5|UBCH5C ubiquitin conjugating enzyme E2 D3 protein-coding chr12-1203 chr12 117833175 117833385 + 21.1 0.000 intron (NM_173598, intron 3 of 19) MIRb|SINE|MIR 135710 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr12-472 chr12 46356923 46357133 + 21.1 0.000 Intergenic Intergenic 15745 NM_001307936 54407 Hs.221847 NM_018976 ENSG00000134294 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38 member 2 protein-coding chr3-996 chr3 41259576 41259786 + 21.1 0.000 intron (NR_136342, intron 33 of 34) intron (NR_136342, intron 33 of 34) 60176 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr12-442 chr12 53371201 53371411 + 21.1 0.000 Intergenic Intergenic -8870 NM_001251825 6667 Hs.620754 NM_003109 ENSG00000185591 SP1 - Sp1 transcription factor protein-coding chr5-581 chr5 14440650 14440860 + 21.1 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -23228 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr18-272 chr18 60053722 60053932 + 21.1 0.000 Intergenic Intergenic 153831 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chrX-417 chrX 13398579 13398789 + 21.1 0.000 Intergenic Intergenic 63443 NR_045260 100133123 Hs.449499 NR_045260 ENSG00000226985 LINC01203 - long intergenic non-protein coding RNA 1203 ncRNA chr12-1244 chr12 30155034 30155244 + 21.1 0.000 Intergenic Intergenic -370380 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr15-764 chr15 71251948 71252158 + 21.1 0.000 intron (NM_024817, intron 4 of 16) intron (NM_024817, intron 4 of 16) -62994 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr10-563 chr10 13924209 13924419 + 21.1 0.000 intron (NM_018027, intron 2 of 24) L2a|LINE|L2 47582 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr22-228 chr22 37906039 37906249 + 21.1 0.000 promoter-TSS (NM_033386) promoter-TSS (NM_033386) -153 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr8-804 chr8 122817086 122817296 + 21.1 0.000 intron (NM_001362797, intron 1 of 4) MLT1J2|LTR|ERVL-MaLR 35536 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr2-632 chr2 189580801 189581011 + 21.1 0.000 promoter-TSS (NM_014585) promoter-TSS (NM_014585) -95 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr1-1535 chr1 171645059 171645269 + 21.1 0.000 intron (NM_000261, intron 1 of 2) LTR41B|LTR|ERVL 7524 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr2-2337 chr2 175926315 175926525 + 21.1 0.000 non-coding (NR_130941, exon 15 of 15) non-coding (NR_130941, exon 15 of 15) 75847 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr4-583 chr4 41009393 41009603 + 21.1 0.000 intron (NM_004307, intron 6 of 17) intron (NM_004307, intron 6 of 17) -152306 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr18-169 chr18 61882597 61882807 + 21.1 0.000 intron (NM_173557, intron 1 of 1) intron (NM_173557, intron 1 of 1) 10305 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr1-1088 chr1 41783295 41783505 + 21.1 0.000 intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 135522 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr16-288 chr16 89093778 89093988 + 21.1 0.000 promoter-TSS (NM_001243279) promoter-TSS (NM_001243279) 31 NR_147929 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr2-202 chr2 46297096 46297306 + 21.1 0.000 promoter-TSS (NM_001430) promoter-TSS (NM_001430) -206 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr6-317 chr6 160974578 160974788 + 21.1 0.000 Intergenic Intergenic -17044 NM_001291958 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr4-129 chr4 184649441 184649651 + 21.1 0.000 promoter-TSS (NM_152683) promoter-TSS (NM_152683) -71 NM_001354782 836 Hs.141125 NM_004346 ENSG00000164305 CASP3 CPP32|CPP32B|SCA-1 caspase 3 protein-coding chr3-1586 chr3 139534157 139534367 + 21.1 0.000 intron (NM_001130992, intron 2 of 2) intron (NM_001130992, intron 2 of 2) 5374 NM_001365940 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr6-653 chr6 35049953 35050163 + 21.1 0.000 intron (NM_015245, intron 11 of 23) intron (NM_015245, intron 11 of 23) 91281 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr16-824 chr16 80171896 80172106 + 21.1 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -368733 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr4-896 chr4 16717311 16717521 + 21.1 0.000 intron (NM_001304435, intron 2 of 7) intron (NM_001304435, intron 2 of 7) 181229 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr18-203 chr18 41955134 41955344 + 21.1 0.000 promoter-TSS (NM_002647) promoter-TSS (NM_002647) 5 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr16-620 chr16 4214166 4214376 + 21.1 0.000 intron (NM_001323667, intron 1 of 6) intron (NM_001323667, intron 1 of 6) 27809 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr4-984 chr4 119747014 119747224 + 21.0 0.000 Intergenic LTR33A_|LTR|ERVL 57396 NR_110660 101927007 Hs.143958 NR_110660 ENSG00000250772 LINC01365 - long intergenic non-protein coding RNA 1365 ncRNA chr17-429 chr17 42121262 42121472 + 21.0 0.000 promoter-TSS (NM_021078) promoter-TSS (NM_021078) 0 NM_021078 2648 Hs.463045 NM_021078 ENSG00000108773 KAT2A GCN5|GCN5L2|PCAF-b|hGCN5 lysine acetyltransferase 2A protein-coding chr5-1559 chr5 91403634 91403844 + 21.0 0.000 intron (NR_027435, intron 1 of 2) intron (NR_027435, intron 1 of 2) -20422 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr7-315 chr7 106153918 106154128 + 21.0 0.000 Intergenic (AGCGCTC)n|Simple_repeat|Simple_repeat -41447 NM_006754 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr1-2603 chr1 64983297 64983507 + 21.0 0.000 intron (NR_119383, intron 5 of 6) intron (NR_119383, intron 5 of 6) -16466 NM_001321856 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr17-947 chr17 21099600 21099810 + 21.0 0.000 Intergenic Intergenic 24149 NR_110895 101060544 Hs.585812 NR_110895 ENSG00000236819 LINC01563 HP08942 long intergenic non-protein coding RNA 1563 ncRNA chr1-1710 chr1 12153488 12153698 + 21.0 0.000 Intergenic Intergenic -13350 NR_107000 102465836 NR_107000 ENSG00000283789 MIR7846 hsa-mir-7846 microRNA 7846 ncRNA chr11-693 chr11 123130043 123130253 + 21.0 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 65100 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr12-508 chr12 66169759 66169969 + 21.0 0.000 exon (NM_001282606, exon 1 of 8) exon (NM_001282606, exon 1 of 8) 208 NM_016056 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 CGI-119|GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding chr2-948 chr2 20166706 20166916 + 21.0 0.000 Intergenic Intergenic 58319 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr1-1050 chr1 85109449 85109659 + 21.0 0.000 intron (NM_001288563, intron 14 of 21) intron (NM_001288563, intron 14 of 21) -24240 NR_039619 100616481 NR_039619 ENSG00000266110 MIR4423 mir-4423 microRNA 4423 ncRNA chr8-421 chr8 143966701 143966911 + 21.0 0.000 intron (NM_000445, intron 2 of 32) intron (NM_000445, intron 2 of 32) 6723 NM_201378 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr6-778 chr6 63527758 63527968 + 21.0 0.000 Intergenic Intergenic -44149 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr3-504 chr3 88149687 88149897 + 21.0 0.000 promoter-TSS (NM_173824) promoter-TSS (NM_173824) 74 NM_001195308 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding chr10-606 chr10 75402211 75402421 + 21.0 0.000 promoter-TSS (NR_110301) promoter-TSS (NR_110301) -422 NR_120651 84858 Hs.195710 NM_032772 ENSG00000165655 ZNF503 NOLZ-1|NOLZ1|Nlz2 zinc finger protein 503 protein-coding chr2-644 chr2 128063611 128063821 + 21.0 0.000 Intergenic LTR86C|LTR|ERVL -27484 NM_020120 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr16-573 chr16 85531510 85531720 + 21.0 0.000 Intergenic Intergenic -79794 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr17-1025 chr17 48176047 48176257 + 21.0 0.000 intron (NM_001075099, intron 9 of 12) intron (NM_001075099, intron 9 of 12) -19641 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr18-217 chr18 8890979 8891189 + 21.0 0.000 Intergenic MER77B|LTR|ERVL 173703 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr19-563 chr19 10194913 10195123 + 21.0 0.000 promoter-TSS (NM_001130823) promoter-TSS (NM_001130823) -65 NM_001318731 1786 Hs.202672 NM_001379 ENSG00000130816 DNMT1 ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT|m.HsaI DNA methyltransferase 1 protein-coding chr6-765 chr6 149454446 149454656 + 21.0 0.000 intron (NM_207360, intron 4 of 5) intron (NM_207360, intron 4 of 5) 30463 NM_207360 340152 Hs.632618 NM_207360 ENSG00000178199 ZC3H12D C6orf95|MCPIP4|TFL|dJ281H8.1|p34 zinc finger CCCH-type containing 12D protein-coding chr14-476 chr14 49770718 49770928 + 21.0 0.000 intron (NM_014315, intron 1 of 12) intron (NM_014315, intron 1 of 12) 2670 NM_014315 23588 Hs.509264 NM_014315 ENSG00000165516 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding chr16-399 chr16 636970 637180 + 21.0 0.000 promoter-TSS (NM_001288710) promoter-TSS (NM_001288710) 123 NR_149003 100287175 Hs.730130 NR_149003 LOC100287175 - uncharacterized LOC100287175 ncRNA chr11-834 chr11 73312965 73313175 + 21.0 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -3709 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr7-932 chr7 29488993 29489203 + 21.0 0.000 intron (NM_001293081, intron 1 of 6) intron (NM_001293081, intron 1 of 6) 5282 NM_001293081 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr16-637 chr16 2430271 2430481 + 21.0 0.000 intron (NM_001761, intron 1 of 16) L2|LINE|L2 929 NM_001761 899 Hs.1973 NM_001761 ENSG00000162063 CCNF FBX1|FBXO1 cyclin F protein-coding chr21-125 chr21 29155492 29155702 + 21.0 0.000 intron (NM_001286620, intron 3 of 4) intron (NM_001286620, intron 3 of 4) 10020 NM_001286624 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr10-407 chr10 102479076 102479286 + 21.0 0.000 TTS (NM_005736) TTS (NM_005736) 17786 NM_024789 79847 Hs.309069 NM_024789 ENSG00000138111 MFSD13A C10orf77|TMEM180|bA18I14.8 major facilitator superfamily domain containing 13A protein-coding chr17-579 chr17 836188 836398 + 21.0 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 27818 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr17-782 chr17 79038701 79038911 + 21.0 0.000 intron (NM_198593, intron 1 of 3) MARNA|DNA|TcMar-Mariner 4507 NM_198593 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and TNF related 1 protein-coding chr9-1178 chr9 84343239 84343449 + 21.0 0.000 intron (NM_022127, intron 1 of 18) intron (NM_022127, intron 1 of 18) -2586 NR_037638 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr3-972 chr3 123688435 123688645 + 21.0 0.000 intron (NM_001321309, intron 18 of 32) L2a|LINE|L2 -1104 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chrX-93 chrX 23783115 23783325 + 21.0 0.000 promoter-TSS (NM_002970) promoter-TSS (NM_002970) 62 NM_002970 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr3-1116 chr3 139764991 139765201 + 21.0 0.000 Intergenic Intergenic -87046 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr10-712 chr10 93445603 93445813 + 21.0 0.000 intron (NM_013451, intron 3 of 53) intron (NM_013451, intron 3 of 53) 36626 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr1-1107 chr1 203692670 203692880 + 21.0 0.000 intron (NM_001001396, intron 2 of 21) intron (NM_001001396, intron 2 of 21) -36806 NR_003019 677843 Hs.676135 NR_003019 ENSG00000221643 SNORA77 ACA63|SNORA77A small nucleolar RNA, H/ACA box 77 snoRNA chrX-282 chrX 135052217 135052427 + 21.0 0.000 promoter-TSS (NM_001078172) promoter-TSS (NM_001078172) -131 NM_001078172 26071 Hs.460924 NM_015582 ENSG00000203950 RTL8A CXX1b|FAM127B|MAR8A|SIRH6 retrotransposon Gag like 8A protein-coding chr5-922 chr5 139518170 139518380 + 21.0 0.000 Intergenic CpG -35517 NM_001301738 340061 Hs.379754 NM_198282 ENSG00000184584 TMEM173 ERIS|MITA|MPYS|NET23|SAVI|STING|STING-beta|hMITA|hSTING transmembrane protein 173 protein-coding chr20-544 chr20 53643057 53643267 + 21.0 0.000 Intergenic Intergenic 34808 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr16-828 chr16 81568583 81568793 + 21.0 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) 34786 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr13-218 chr13 99498517 99498727 + 21.0 0.000 intron (NR_110731, intron 1 of 4) CpG 684 NR_110731 102725509 Hs.648968 NR_110731 LINC01232 TCONS_00021520 long intergenic non-protein coding RNA 1232 ncRNA chr10-695 chr10 43595250 43595460 + 21.0 0.000 Intergenic HERV3-int|LTR|ERV1 -11052 NM_001318142 220992 Hs.147440 NM_145312 ENSG00000198298 ZNF485 - zinc finger protein 485 protein-coding chr7-1004 chr7 143331546 143331756 + 21.0 0.000 exon (NM_000083, exon 10 of 23) exon (NM_000083, exon 10 of 23) 15540 NR_046453 1180 Hs.121483 NM_000083 ENSG00000188037 CLCN1 CLC1 chloride voltage-gated channel 1 protein-coding chr1-2303 chr1 30083828 30084038 + 21.0 0.000 Intergenic Intergenic -46321 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr11-1071 chr11 71580109 71580319 + 21.0 0.000 Intergenic HAL1M8|LINE|L1 2661 NM_001005405 440051 Hs.679617 NM_001005405 ENSG00000204571 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding chr11-483 chr11 45147176 45147386 + 21.0 0.000 promoter-TSS (NM_001256696) promoter-TSS (NM_001256696) -62 NM_001256695 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr2-1603 chr2 159285823 159286033 + 21.0 0.000 intron (NM_001330280, intron 1 of 9) intron (NM_001330280, intron 1 of 9) 775 NM_001330278 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr14-274 chr14 73569075 73569285 + 21.0 0.000 5' UTR (NM_001364178, exon 1 of 3) 5' UTR (NM_001364178, exon 1 of 3) 121 NM_001364178 10965 Hs.446685 NM_006821 ENSG00000119673 ACOT2 CTE-IA|CTE1A|MTE1|PTE2|PTE2A|ZAP128 acyl-CoA thioesterase 2 protein-coding chr2-688 chr2 74845578 74845788 + 21.0 0.000 intron (NM_000189, intron 1 of 17) intron (NM_000189, intron 1 of 17) 13028 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr19-867 chr19 1232653 1232863 + 21.0 0.000 intron (NM_152769, intron 8 of 8) MER58B|DNA|hAT-Charlie 5247 NM_152769 255057 Hs.346575 NM_152769 ENSG00000099625 CBARP BARP|C19orf26|DOS CACN subunit beta associated regulatory protein protein-coding chr21-344 chr21 34745617 34745827 + 21.0 0.000 promoter-TSS (NR_038886) promoter-TSS (NR_038886) -103 NR_038885 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA chr2-1314 chr2 46882081 46882291 + 21.0 0.000 Intergenic Intergenic 33620 NM_001171509 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr3-693 chr3 45167505 45167715 + 21.0 0.000 Intergenic Intergenic -21188 NM_178181 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr7-452 chr7 128031915 128032125 + 21.0 0.000 promoter-TSS (NM_022143) promoter-TSS (NM_022143) -583 NM_022143 64101 Hs.655003 NM_022143 ENSG00000128594 LRRC4 NAG14|NGL-2 leucine rich repeat containing 4 protein-coding chr22-161 chr22 46150234 46150444 + 21.0 0.000 promoter-TSS (NM_005036) promoter-TSS (NM_005036) -187 NM_005036 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr1-1443 chr1 184545667 184545877 + 21.0 0.000 intron (NM_030806, intron 3 of 5) intron (NM_030806, intron 3 of 5) 158743 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr2-1877 chr2 48346246 48346456 + 21.0 0.000 exon (NM_002158, exon 3 of 7) exon (NM_002158, exon 3 of 7) 31669 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr11-1592 chr11 12042368 12042578 + 21.0 0.000 intron (NR_135109, intron 1 of 1) intron (NR_135109, intron 1 of 1) 11598 NR_135109 105376554 Hs.523483 NR_135109 ENSG00000254486 LINC02547 - long intergenic non-protein coding RNA 2547 ncRNA chr2-1158 chr2 167192759 167192969 + 21.0 0.000 intron (NM_001199144, intron 1 of 8) intron (NM_001199144, intron 1 of 8) 5492 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr22-422 chr22 24486621 24486831 + 21.0 0.000 intron (NR_028483, intron 1 of 7) intron (NR_028483, intron 1 of 7) 8348 NR_028483 646023 Hs.632761 NM_001039784 ENSG00000178803 ADORA2A-AS1 C22orf45 ADORA2A antisense RNA 1 ncRNA chr17-493 chr17 28908844 28909054 + 21.0 0.000 3' UTR (NM_001290131, exon 11 of 11) 3' UTR (NM_001290131, exon 11 of 11) -5870 NM_144683 147015 Hs.631760 NM_144683 ENSG00000167536 DHRS13 SDR7C5 dehydrogenase/reductase 13 protein-coding chr12-1272 chr12 71710289 71710499 + 21.0 0.000 Intergenic LTR78|LTR|ERV1 24312 NM_018279 55266 Hs.644802 NM_018279 ENSG00000139291 TMEM19 - transmembrane protein 19 protein-coding chr15-655 chr15 57820127 57820337 + 21.0 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 113518 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr18-85 chr18 11851178 11851388 + 21.0 0.000 promoter-TSS (NM_020412) promoter-TSS (NM_020412) -130 NM_020412 57132 Hs.656244 NM_020412 ENSG00000255112 CHMP1B C10orf2|C18-ORF2|C18orf2|CHMP1.5|Vps46-2|Vps46B|hVps46-2 charged multivesicular body protein 1B protein-coding chr4-590 chr4 80279998 80280208 + 21.0 0.000 intron (NM_004464, intron 2 of 2) intron (NM_004464, intron 2 of 2) 11838 NM_001291812 2250 Hs.37055 NM_004464 ENSG00000138675 FGF5 HBGF-5|Smag-82|TCMGLY fibroblast growth factor 5 protein-coding chr11-1144 chr11 116788055 116788265 + 21.0 0.000 promoter-TSS (NM_001317086) promoter-TSS (NM_001317086) -137 NM_001317086 8882 Hs.7165 NM_003904 ENSG00000109917 ZPR1 ZNF259 ZPR1 zinc finger protein-coding chr4-266 chr4 158768784 158768994 + 21.0 0.000 promoter-TSS (NM_020840) promoter-TSS (NM_020840) -137 NM_020840 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr10-650 chr10 74266059 74266269 + 21.0 0.000 intron (NM_001369124, intron 3 of 9) intron (NM_001369124, intron 3 of 9) 89401 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr1-2127 chr1 218823280 218823490 + 21.0 0.000 intron (NR_031644, intron 6 of 6) intron (NR_031644, intron 6 of 6) 95126 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chr19-1244 chr19 46378308 46378518 + 21.0 0.000 intron (NM_001204284, intron 4 of 11) L1ME2|LINE|L1 31326 NM_006247 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr4-911 chr4 159298668 159298878 + 21.0 0.000 intron (NM_001351727, intron 1 of 24) intron (NM_001351727, intron 1 of 24) 30964 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr5-804 chr5 74767192 74767402 + 21.0 0.000 promoter-TSS (NM_001364506) promoter-TSS (NM_001364506) 48 NM_001271665 10412 Hs.482526 NM_014886 ENSG00000164346 NSA2 CDK105|HCL-G1|HCLG1|HUSSY-29|HUSSY29|TINP1 NSA2 ribosome biogenesis factor protein-coding chr5-412 chr5 102865812 102866022 + 21.0 0.000 promoter-TSS (NM_138766) promoter-TSS (NM_138766) 94 NM_000919 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr19-446 chr19 29811687 29811897 + 21.0 0.000 promoter-TSS (NM_001322261) promoter-TSS (NM_001322261) -199 NM_001238 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr6-605 chr6 112014618 112014828 + 21.0 0.000 Intergenic Intergenic -39352 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 CCN6 LIBC|PPAC|PPD|WISP-3|WISP3 cellular communication network factor 6 protein-coding chr6-435 chr6 130233409 130233619 + 21.0 0.000 intron (NM_001258275, intron 2 of 13) intron (NM_001258275, intron 2 of 13) -10563 NM_001017373 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr3-440 chr3 30606425 30606635 + 21.0 0.000 promoter-TSS (NM_003242) promoter-TSS (NM_003242) 28 NM_001024847 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr17-590 chr17 74776196 74776406 + 21.0 0.000 promoter-TSS (NM_015654) promoter-TSS (NM_015654) 44 NM_001305087 26151 Hs.144058 NM_015654 ENSG00000109065 NAT9 EBSP, hNATL N-acetyltransferase 9 (putative) protein-coding chr7-1439 chr7 55050495 55050705 + 21.0 0.000 intron (NM_001346941, intron 1 of 21) L2c|LINE|L2 31568 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr2-491 chr2 36597723 36597933 + 21.0 0.000 intron (NM_005102, intron 1 of 7) CpG 340 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr3-518 chr3 55416359 55416569 + 21.0 0.000 Intergenic Intergenic 64934 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chrX-155 chrX 48521749 48521959 + 21.0 0.000 promoter-TSS (NM_006579) promoter-TSS (NM_006579) 46 NM_006579 10682 Hs.30619 NM_006579 ENSG00000147155 EBP CDPX2|CHO2|CPX|CPXD|MEND EBP cholestenol delta-isomerase protein-coding chr21-92 chr21 25607458 25607668 + 21.0 0.000 promoter-TSS (NM_017446) promoter-TSS (NM_017446) -74 NM_017446 54148 Hs.420696 NM_017446 ENSG00000154719 MRPL39 C21orf92|L39mt|MRP-L5|MRPL5|MSTP003|PRED22|PRED66|RPML5 mitochondrial ribosomal protein L39 protein-coding chr10-925 chr10 119271437 119271647 + 21.0 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 63971 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr3-1262 chr3 183033744 183033954 + 21.0 0.000 intron (NR_120640, intron 13 of 18) L1ME4a|LINE|L1 -47931 NM_001308101 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr5-1025 chr5 135269392 135269602 + 21.0 0.000 intron (NR_161235, intron 3 of 5) intron (NR_161235, intron 3 of 5) -21320 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr12-661 chr12 105254193 105254403 + 21.0 0.000 Intergenic Intergenic -18068 NM_001251904 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr11-671 chr11 65225325 65225535 + 21.0 0.000 intron (NR_033396, intron 6 of 9) intron (NR_033396, intron 6 of 9) 11590 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr9-528 chr9 32395868 32396078 + 21.0 0.000 intron (NM_001278352, intron 2 of 21) intron (NM_001278352, intron 2 of 21) 11330 NM_001362840 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr4-572 chr4 6273107 6273317 + 21.0 0.000 intron (NM_001145853, intron 1 of 7) intron (NM_001145853, intron 1 of 7) 3362 NM_006005 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr18-96 chr18 10525927 10526137 + 21.0 0.000 promoter-TSS (NM_003826) promoter-TSS (NM_003826) 5 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr9-894 chr9 131402809 131403019 + 21.0 0.000 Intergenic Intergenic -27176 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr1-2066 chr1 22451834 22452044 + 21.0 0.000 promoter-TSS (NM_001330398) promoter-TSS (NM_001330398) 88 NM_014870 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr19-1416 chr19 47106839 47107049 + 21.0 0.000 intron (NM_015168, intron 2 of 14) intron (NM_015168, intron 2 of 14) 6832 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chr14-682 chr14 99752652 99752862 + 21.0 0.000 Intergenic Intergenic -40656 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr9-511 chr9 16795326 16795536 + 21.0 0.000 intron (NM_017637, intron 1 of 6) intron (NM_017637, intron 1 of 6) 68617 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr11-915 chr11 111557840 111558050 + 21.0 0.000 intron (NM_178834, intron 6 of 6) intron (NM_178834, intron 6 of 6) 17437 NM_001258390 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr1-1110 chr1 226062708 226062918 + 21.0 0.000 promoter-TSS (NR_002315) promoter-TSS (NR_002315) 86 NR_002315 440926 Hs.533624 NR_002315 H3F3AP4 p13 H3 histone, family 3A, pseudogene 4 pseudo chr10-658 chr10 119655820 119656030 + 21.0 0.000 intron (NM_004281, intron 1 of 3) intron (NM_004281, intron 1 of 3) 4555 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr19-789 chr19 3761485 3761695 + 21.0 0.000 5' UTR (NM_004886, exon 1 of 11) 5' UTR (NM_004886, exon 1 of 11) 102 NM_004886 9546 Hs.25527 NM_004886 ENSG00000011132 APBA3 MGC:15815|X11L2|mint3 amyloid beta precursor protein binding family A member 3 protein-coding chr9-1012 chr9 100098212 100098422 + 21.0 0.000 promoter-TSS (NM_001318381) promoter-TSS (NM_001318381) 683 NM_015051 23071 Hs.154023 NM_015051 ENSG00000023318 ERP44 PDIA10|TXNDC4 endoplasmic reticulum protein 44 protein-coding chr1-952 chr1 37859562 37859772 + 21.0 0.000 promoter-TSS (NM_005955) promoter-TSS (NM_005955) -75 NM_005955 4520 Hs.471991 NM_005955 ENSG00000188786 MTF1 MTF-1|ZRF metal regulatory transcription factor 1 protein-coding chr7-526 chr7 99500276 99500486 + 21.0 0.000 promoter-TSS (NM_032164) promoter-TSS (NM_032164) -73 NM_001345968 84124 Hs.386324 NM_032164 ENSG00000160908 ZNF394 ZKSCAN14|ZSCAN46 zinc finger protein 394 protein-coding chr2-1542 chr2 186641844 186642054 + 21.0 0.000 intron (NM_001145000, intron 10 of 27) intron (NM_001145000, intron 10 of 27) 41744 NM_001144999 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr18-219 chr18 13577354 13577564 + 21.0 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -33655 NR_039752 100616130 NR_039752 ENSG00000263527 MIR4526 mir-4526 microRNA 4526 ncRNA chr6-595 chr6 15322903 15323113 + 21.0 0.000 intron (NM_001267040, intron 1 of 17) intron (NM_001267040, intron 1 of 17) 74153 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr3-1767 chr3 2643396 2643606 + 21.0 0.000 intron (NM_175607, intron 4 of 24) intron (NM_175607, intron 4 of 24) -248714 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr2-1419 chr2 163877340 163877550 + 21.0 0.000 Intergenic Intergenic -141437 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr2-707 chr2 70293728 70293938 + 21.0 0.000 promoter-TSS (NM_001317171) promoter-TSS (NM_001317171) -62 NM_001317165 6637 Hs.465167 NM_003096 ENSG00000143977 SNRPG SMG|Sm-G small nuclear ribonucleoprotein polypeptide G protein-coding chr17-599 chr17 43720661 43720871 + 21.0 0.000 Intergenic CpG 38025 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr2-1435 chr2 216495676 216495886 + 21.0 0.000 Intergenic L1MC3|LINE|L1 -3063 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr6-458 chr6 151436708 151436918 + 21.0 0.000 intron (NM_001271937, intron 1 of 10) L3|LINE|CR1 15313 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr1-1436 chr1 114346431 114346641 + 21.0 0.000 Intergenic Intergenic 164667 NM_033020 51592 Hs.26837 NM_015906 ENSG00000197323 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding chr2-800 chr2 238370839 238371049 + 21.0 0.000 intron (NM_001139490, intron 13 of 14) intron (NM_001139490, intron 13 of 14) 50400 NM_001139490 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding chr13-214 chr13 52194253 52194463 + 21.0 0.000 non-coding (NR_002816, exon 1 of 9) non-coding (NR_002816, exon 1 of 9) 109 NR_051964 100887750 Hs.553878 NR_002816 ENSG00000243406 MRPS31P5 MRPS31P3 mitochondrial ribosomal protein S31 pseudogene 5 pseudo chr1-713 chr1 67736085 67736295 + 21.0 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 50989 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr22-281 chr22 36458054 36458264 + 21.0 0.000 Intergenic Intergenic 23481 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr6-677 chr6 145749740 145749950 + 21.0 0.000 intron (NR_038246, intron 1 of 2) intron (NR_038246, intron 1 of 2) -13822 NM_001360064 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr1-1154 chr1 28782072 28782282 + 21.0 0.000 Intergenic L2a|LINE|L2 -29993 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chr3-1095 chr3 12868077 12868287 + 21.0 0.000 Intergenic LTR13_|LTR|ERVK 17029 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr11-812 chr11 43358796 43359006 + 21.0 0.000 promoter-TSS (NM_018259) promoter-TSS (NM_018259) 16 NM_001307943 55761 Hs.191186 NM_018259 ENSG00000052841 TTC17 - tetratricopeptide repeat domain 17 protein-coding chr12-665 chr12 120720634 120720844 + 21.0 0.000 3' UTR (NM_001080533, exon 5 of 5) 3' UTR (NM_001080533, exon 5 of 5) -2454 NR_039849 100616329 NR_039849 ENSG00000284143 MIR4700 mir-4700 microRNA 4700 ncRNA chr20-124 chr20 23637904 23638114 + 21.0 0.000 promoter-TSS (NM_000099) promoter-TSS (NM_000099) -54 NM_001288614 1471 Hs.304682 NM_000099 ENSG00000101439 CST3 ARMD11|HEL-S-2 cystatin C protein-coding chr6-281 chr6 26365265 26365475 + 21.0 0.000 intron (NM_001197248, intron 1 of 8) intron (NM_001197248, intron 1 of 8) 172 NM_001197247 11118 Hs.376046 NM_007047 ENSG00000186470 BTN3A2 BT3.2|BTF4|BTN3.2|CD277 butyrophilin subfamily 3 member A2 protein-coding chr12-982 chr12 58566758 58566968 + 21.0 0.000 intron (NR_120452, intron 7 of 7) intron (NR_120452, intron 7 of 7) -24839 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr18-274 chr18 73340538 73340748 + 21.0 0.000 intron (NR_038340, intron 2 of 2) intron (NR_038340, intron 2 of 2) 15702 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr11-842 chr11 93543319 93543529 + 21.0 0.000 promoter-TSS (NM_020179) promoter-TSS (NM_020179) -33 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr4-1114 chr4 54100948 54101158 + 21.0 0.000 intron (NM_133267, intron 1 of 1) CpG 890 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr15-205 chr15 99733406 99733616 + 21.0 0.000 promoter-TSS (NM_001284417) promoter-TSS (NM_001284417) -67 NM_001284422 145748 Hs.562568 NM_152449 ENSG00000183060 LYSMD4 - LysM domain containing 4 protein-coding chr3-1714 chr3 58296562 58296772 + 21.0 0.000 Intergenic Intergenic -9578 NM_007042 11102 Hs.446320 NM_007042 ENSG00000163684 RPP14 P14 ribonuclease P/MRP subunit p14 protein-coding chrX-159 chrX 80765230 80765440 + 21.0 0.000 intron (NM_153252, intron 6 of 40) ERVL-int|LTR|ERVL 44542 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr17-909 chr17 76493110 76493320 + 21.0 0.000 intron (NM_024599, intron 1 of 18) intron (NM_024599, intron 1 of 18) -5306 NM_001005498 79651 Hs.464157 NM_024599 ENSG00000129667 RHBDF2 RHBDL5|RHBDL6|TEC|TOC|TOCG|iRhom2 rhomboid 5 homolog 2 protein-coding chr4-946 chr4 133865646 133865856 + 21.0 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 336038 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr5-709 chr5 75321029 75321239 + 21.0 0.000 Intergenic Intergenic -16034 NM_001364187 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding chr12-1282 chr12 93135336 93135546 + 21.0 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -38925 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr2-1354 chr2 230714026 230714236 + 21.0 0.000 intron (NM_001130849, intron 1 of 8) L2c|LINE|L2 583 NM_001130849 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr11-402 chr11 66257608 66257818 + 21.0 0.000 promoter-TSS (NM_001134774) promoter-TSS (NM_001134774) 10 NM_001134776 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr7-379 chr7 44044459 44044669 + 21.0 0.000 promoter-TSS (NM_001284315) promoter-TSS (NM_001284315) -76 NM_001284315 28988 Hs.436500 NM_014063 ENSG00000136279 DBNL ABP1|HIP-55|HIP55|SH3P7 drebrin like protein-coding chr15-463 chr15 57328166 57328376 + 21.0 0.000 Intergenic Intergenic 9133 NR_120337 101928611 Hs.569495 NR_120337 LINC01413 - long intergenic non-protein coding RNA 1413 ncRNA chr6-169 chr6 36196426 36196636 + 21.0 0.000 promoter-TSS (NM_015695) promoter-TSS (NM_015695) -213 NM_015695 27154 Hs.520096 NM_015695 ENSG00000096070 BRPF3 - bromodomain and PHD finger containing 3 protein-coding chr1-2117 chr1 193348692 193348902 + 21.0 0.000 intron (NR_125789, intron 1 of 3) intron (NR_125789, intron 1 of 3) 44052 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr17-816 chr17 39404599 39404809 + 20.9 0.000 3' UTR (NM_004774, exon 17 of 17) 3' UTR (NM_004774, exon 17 of 17) -2148 NM_001370209 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr9-786 chr9 122159744 122159954 + 20.9 0.000 promoter-TSS (NM_198469) promoter-TSS (NM_198469) -59 NM_198469 254956 Hs.71428 NM_198469 ENSG00000185681 MORN5 C9orf113|C9orf18 MORN repeat containing 5 protein-coding chr2-1724 chr2 227107314 227107524 + 20.9 0.000 intron (NM_000092, intron 12 of 47) intron (NM_000092, intron 12 of 47) 57140 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr3-609 chr3 69012121 69012331 + 20.9 0.000 intron (NR_103826, intron 2 of 15) intron (NR_103826, intron 2 of 15) 1458 NR_103826 285203 Hs.518059 NM_173654 ENSG00000163378 EOGT AER61|AOS4|C3orf64|EOGT1 EGF domain specific O-linked N-acetylglucosamine transferase protein-coding chr16-826 chr16 80751217 80751427 + 20.9 0.000 intron (NM_152342, intron 1 of 6) L1MEg|LINE|L1 53276 NM_152342 124359 Hs.60257 NM_152342 ENSG00000166446 CDYL2 PCCP1 chromodomain Y like 2 protein-coding chr7-1434 chr7 46139096 46139306 + 20.9 0.000 Intergenic L1MD|LINE|L1 -217929 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr4-589 chr4 59612401 59612611 + 20.9 0.000 Intergenic L2a|LINE|L2 598933 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr8-493 chr8 41542663 41542873 + 20.9 0.000 3' UTR (NM_032336, exon 8 of 8) 3' UTR (NM_032336, exon 8 of 8) 13507 NM_032336 84296 Hs.656996 NM_032336 ENSG00000147536 GINS4 SLD5 GINS complex subunit 4 protein-coding chr5-1015 chr5 113807572 113807782 + 20.9 0.000 Intergenic Intergenic 293983 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding GL000225.1-13 GL000225.1 28828 29038 + 20.9 0.000 NA NA NA NA chr7-726 chr7 5766468 5766678 + 20.9 0.000 intron (NM_207111, intron 1 of 16) MLT1A|LTR|ERVL-MaLR 15090 NM_207111 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr17-556 chr17 4790281 4790491 + 20.9 0.000 3' UTR (NM_001014985, exon 4 of 4) 3' UTR (NM_001014985, exon 4 of 4) 1422 NM_001014985 388323 Hs.131035 NM_001014985 ENSG00000182327 GLTPD2 - glycolipid transfer protein domain containing 2 protein-coding chrX-582 chrX 95058919 95059129 + 20.9 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 4202 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr7-276 chr7 538336 538546 + 20.9 0.000 Intergenic Intergenic 18050 NR_033963 441307 Hs.521334 NR_033963 ENSG00000223855 HRAT92 - heart tissue-associated transcript 92 ncRNA chr10-285 chr10 32346286 32346496 + 20.9 0.000 promoter-TSS (NR_104163) promoter-TSS (NR_104163) 767 NM_001272004 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr1-950 chr1 33893509 33893719 + 20.9 0.000 intron (NM_052896, intron 5 of 69) intron (NM_052896, intron 5 of 69) 24658 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chrX-115 chrX 129843830 129844040 + 20.9 0.000 promoter-TSS (NM_001008222) promoter-TSS (NM_001008222) -49 NM_016032 51114 Hs.193566 NM_016032 ENSG00000188706 ZDHHC9 CGI89|CXorf11|DHHC9|MMSA1|MRXSZ|ZDHHC10|ZNF379|ZNF380 zinc finger DHHC-type containing 9 protein-coding chr17-845 chr17 4562630 4562840 + 20.9 0.000 Intergenic Intergenic -2158 NM_001288702 124975 Hs.130749 NM_153338 ENSG00000167741 GGT6 - gamma-glutamyltransferase 6 protein-coding chr17-708 chr17 42780591 42780801 + 20.9 0.000 promoter-TSS (NM_001321299) promoter-TSS (NM_001321299) 86 NM_032387 65266 Hs.105448 NM_032387 ENSG00000126562 WNK4 PHA2B|PRKWNK4 WNK lysine deficient protein kinase 4 protein-coding chr10-702 chr10 75543057 75543267 + 20.9 0.000 intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) -9296 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA chr5-951 chr5 108084118 108084328 + 20.9 0.000 intron (NM_001163315, intron 6 of 8) intron (NM_001163315, intron 6 of 8) 297875 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr10-919 chr10 101015293 101015503 + 20.9 0.000 intron (NM_001195263, intron 11 of 16) L2b|LINE|L2 12901 NM_001318101 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr7-1044 chr7 102042320 102042530 + 20.9 0.000 intron (NM_001913, intron 3 of 22) intron (NM_001913, intron 3 of 22) 224799 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr3-1156 chr3 99473311 99473521 + 20.9 0.000 Intergenic Intergenic -165178 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr5-679 chr5 95591730 95591940 + 20.9 0.000 intron (NM_198150, intron 6 of 7) intron (NM_198150, intron 6 of 7) -28252 NM_199243 285601 Hs.143315 NM_199243 ENSG00000178015 GPR150 PGR11 G protein-coupled receptor 150 protein-coding chr11-1217 chr11 12175976 12176186 + 20.9 0.000 intron (NR_144420, intron 3 of 27) L4_C_Mam|LINE|RTE-X 12398 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr3-1213 chr3 54356308 54356518 + 20.9 0.000 intron (NM_018398, intron 3 of 37) intron (NM_018398, intron 3 of 37) 233861 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr11-1257 chr11 118415783 118415993 + 20.9 0.000 intron (NR_046369, intron 3 of 3) intron (NR_046369, intron 3 of 3) 2927 NR_046370 100131626 Hs.721614 NR_046369 LOC100131626 - uncharacterized LOC100131626 ncRNA chr2-1136 chr2 60823108 60823318 + 20.9 0.000 Intergenic Intergenic 58101 NR_033980 400957 Hs.170358 NR_033980 ENSG00000228414 LINC01185 - long intergenic non-protein coding RNA 1185 ncRNA chr3-964 chr3 67635315 67635525 + 20.9 0.000 intron (NM_001177599, intron 1 of 10) intron (NM_001177599, intron 1 of 10) 19194 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr1-1723 chr1 48494468 48494678 + 20.9 0.000 Intergenic Intergenic -22365 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr8-991 chr8 127294688 127294898 + 20.9 0.000 intron (NR_117100, intron 5 of 5) intron (NR_117100, intron 5 of 5) 50156 NR_117099 103021164 Hs.571531 NR_117099 CASC21 CARLO2|CARLo-2|LINC01244 cancer susceptibility 21 ncRNA chr15-398 chr15 66780148 66780358 + 20.9 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 78017 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr19-912 chr19 11694793 11695003 + 20.9 0.000 Intergenic CpG 20900 NR_028594 401898 Hs.672384 NM_001013691 ZNF833P ZNF833 zinc finger protein 833, pseudogene pseudo chr2-2005 chr2 64036395 64036605 + 20.9 0.000 Intergenic Intergenic -17072 NM_001005739 51542 Hs.48499 NM_016516 ENSG00000143952 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L VPS54 subunit of GARP complex protein-coding chr4-1065 chr4 102263110 102263320 + 20.9 0.000 intron (NM_022154, intron 7 of 7) intron (NM_022154, intron 7 of 7) 61097 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr3-461 chr3 115092538 115092748 + 20.9 0.000 intron (NM_001348800, intron 1 of 11) intron (NM_001348800, intron 1 of 11) 7665 NM_001348804 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr5-959 chr5 139882284 139882494 + 20.9 0.000 intron (NM_013983, intron 2 of 10) intron (NM_013983, intron 2 of 10) 86581 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr14-370 chr14 54566021 54566231 + 20.9 0.000 Intergenic CpG -1486 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr15-172 chr15 40755154 40755364 + 20.9 0.000 promoter-TSS (NM_001323896) promoter-TSS (NM_001323896) -5 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chr10-726 chr10 132320249 132320459 + 20.9 0.000 intron (NM_001318878, intron 1 of 11) MER67A|LTR|ERV1 11526 NM_001318880 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr21-116 chr21 46286329 46286539 + 20.9 0.000 promoter-TSS (NM_003906) promoter-TSS (NM_003906) 92 NM_058181 54059 Hs.474066 NM_058181 ENSG00000182362 YBEY C21orf57 ybeY metalloendoribonuclease protein-coding chr8-676 chr8 82257876 82258086 + 20.9 0.000 Intergenic Intergenic -415695 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr5-1029 chr5 141557781 141557991 + 20.9 0.000 promoter-TSS (NR_038333) promoter-TSS (NR_038333) -425 NR_038333 100505658 Hs.655458 NR_038333 ENSG00000246422 LOC100505658 - uncharacterized LOC100505658 ncRNA chr19-550 chr19 3699285 3699495 + 20.9 0.000 intron (NM_001195733, intron 1 of 16) intron (NM_001195733, intron 1 of 16) 1078 NM_012398 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr12-1090 chr12 96401243 96401453 + 20.9 0.000 promoter-TSS (NM_001170464) promoter-TSS (NM_001170464) -909 NM_001170464 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr10-698 chr10 71956335 71956545 + 20.9 0.000 Intergenic LTR13_|LTR|ERVK -7955 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr8-386 chr8 36901502 36901712 + 20.9 0.000 intron (NM_001031836, intron 19 of 26) intron (NM_001031836, intron 19 of 26) 117233 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr1-1361 chr1 28518010 28518220 + 20.9 0.000 promoter-TSS (NM_001048194) promoter-TSS (NM_001048194) -111 NM_001048194 1104 Hs.469723 NM_001269 ENSG00000180198 RCC1 CHC1|RCC1-I|SNHG3-RCC1 regulator of chromosome condensation 1 protein-coding chr16-535 chr16 30762000 30762210 + 20.9 0.000 promoter-TSS (NM_001286572) promoter-TSS (NM_001286572) -43 NM_001014979 90835 Hs.724010 NM_001014979 ENSG00000196118 CCDC189 C16orf93 coiled-coil domain containing 189 protein-coding chr12-827 chr12 50099940 50100150 + 20.9 0.000 3' UTR (NM_003076, exon 13 of 13) 3' UTR (NM_003076, exon 13 of 13) -3963 NM_005276 2819 Hs.524418 NM_005276 ENSG00000167588 GPD1 GPD-C|GPDH-C|HTGTI glycerol-3-phosphate dehydrogenase 1 protein-coding chr3-590 chr3 53130278 53130488 + 20.9 0.000 promoter-TSS (NM_052859) promoter-TSS (NM_052859) 52 NM_052859 91869 Hs.631910 NM_052859 ENSG00000163933 RFT1 CDG1N RFT1 homolog protein-coding chr17-636 chr17 954692 954902 + 20.9 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 24979 NM_022463 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr11-711 chr11 1749922 1750132 + 20.9 0.000 intron (NM_001170820, intron 1 of 2) intron (NM_001170820, intron 1 of 2) 568 NM_001170820 402778 Hs.121575 NM_001170820 ENSG00000244242 IFITM10 DSPA3 interferon induced transmembrane protein 10 protein-coding chr7-951 chr7 128097331 128097541 + 20.9 0.000 Intergenic L2a|LINE|L2 15575 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr1-1391 chr1 160993650 160993860 + 20.9 0.000 Intergenic Intergenic 27397 NM_001348091 50848 Hs.517293 NM_016946 ENSG00000158769 F11R CD321|JAM|JAM1|JAMA|JCAM|KAT|PAM-1 F11 receptor protein-coding chr5-756 chr5 165321962 165322172 + 20.9 0.000 Intergenic Intergenic 851788 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chrX-186 chrX 119943623 119943833 + 20.9 0.000 promoter-TSS (NM_024528) promoter-TSS (NM_024528) 23 NM_024528 79576 Hs.522771 NM_024528 ENSG00000101882 NKAP - NFKB activating protein protein-coding chr2-964 chr2 216315854 216316064 + 20.9 0.000 intron (NM_020814, intron 1 of 3) intron (NM_020814, intron 1 of 3) 56524 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr4-670 chr4 88938206 88938416 + 20.9 0.000 intron (NM_014883, intron 4 of 23) intron (NM_014883, intron 4 of 23) -114950 NM_001265579 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr3-1059 chr3 23443095 23443305 + 20.9 0.000 intron (NM_001370225, intron 3 of 5) intron (NM_001370225, intron 3 of 5) 239873 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr7-1088 chr7 134891394 134891604 + 20.9 0.000 promoter-TSS (NM_033140) promoter-TSS (NM_033140) 41 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr7-812 chr7 2124835 2125045 + 20.9 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -35888 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr9-1238 chr9 135985701 135985911 + 20.9 0.000 Intergenic Intergenic -24433 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr13-127 chr13 94310433 94310643 + 20.9 0.000 intron (NM_005708, intron 6 of 8) intron (NM_005708, intron 6 of 8) -122547 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr6-793 chr6 155765991 155766201 + 20.9 0.000 Intergenic L4_C_Mam|LINE|RTE-X -180701 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr3-2027 chr3 64903068 64903278 + 20.9 0.000 intron (NR_038264, intron 4 of 5) CR1-12_AMi|LINE|CR1 -215173 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr6-937 chr6 107665734 107665944 + 20.9 0.000 Intergenic Intergenic 66311 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr1-2196 chr1 58163002 58163212 + 20.9 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 87396 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr1-1248 chr1 162055172 162055382 + 20.9 0.000 Intergenic Intergenic -14414 NM_014697 9722 Hs.731942 NM_014697 ENSG00000198929 NOS1AP 6330408P19Rik|CAPON nitric oxide synthase 1 adaptor protein protein-coding chr8-427 chr8 132877458 132877668 + 20.9 0.000 intron (NM_003235, intron 5 of 47) intron (NM_003235, intron 5 of 47) 10605 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr6-209 chr6 7312966 7313176 + 20.9 0.000 exon (NM_003144, exon 1 of 8) exon (NM_003144, exon 1 of 8) 128 NM_003144 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr7-1148 chr7 87316882 87317092 + 20.9 0.000 Intergenic Intergenic 28505 NR_015381 11257 Hs.274329 NM_007233 ENSG00000182165 TP53TG1 LINC00096|NCRNA00096|P53TG1|P53TG1-D|TP53AP1 TP53 target 1 ncRNA chr19-1087 chr19 31214195 31214405 + 20.9 0.000 intron (NR_138036, intron 2 of 4) intron (NR_138036, intron 2 of 4) 46790 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr2-977 chr2 46435078 46435288 + 20.9 0.000 intron (NR_103805, intron 1 of 3) intron (NR_103805, intron 1 of 3) 5993 NR_103805 101805491 Hs.304781 NR_103805 ENSG00000187600 LINC02583 - long intergenic non-protein coding RNA 2583 ncRNA chr1-894 chr1 97145516 97145726 + 20.9 0.000 intron (NM_000110, intron 20 of 22) intron (NM_000110, intron 20 of 22) 49698 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr20-449 chr20 35792020 35792230 + 20.9 0.000 intron (NM_016436, intron 1 of 17) intron (NM_016436, intron 1 of 17) 20110 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding chr7-546 chr7 129225332 129225542 + 20.9 0.000 exon (NM_015328, exon 1 of 17) exon (NM_015328, exon 1 of 17) 407 NM_015328 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr14-340 chr14 103137100 103137310 + 20.9 0.000 3' UTR (NM_001371221, exon 13 of 13) 3' UTR (NM_001371221, exon 13 of 13) 10899 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr1-2339 chr1 1216173 1216383 + 20.9 0.000 TTS (NM_016547) TTS (NM_016547) -2125 NM_003327 7293 Hs.129780 NM_003327 ENSG00000186827 TNFRSF4 ACT35|CD134|IMD16|OX40|TXGP1L TNF receptor superfamily member 4 protein-coding chr8-750 chr8 51012808 51013018 + 20.9 0.000 Intergenic L1PA17|LINE|L1 796532 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr11-694 chr11 320642 320852 + 20.9 0.000 non-coding (NR_049759, exon 1 of 2) non-coding (NR_049759, exon 1 of 2) 113 NM_021034 10410 Hs.374650 NM_021034 ENSG00000142089 IFITM3 1-8U|DSPA2b|IP15 interferon induced transmembrane protein 3 protein-coding chr4-768 chr4 80238121 80238331 + 20.9 0.000 Intergenic MER44B|DNA|TcMar-Tigger -28362 NM_033143 2250 Hs.37055 NM_004464 ENSG00000138675 FGF5 HBGF-5|Smag-82|TCMGLY fibroblast growth factor 5 protein-coding chr13-516 chr13 35549548 35549758 + 20.9 0.000 intron (NM_001204197, intron 1 of 17) MLT1J|LTR|ERVL-MaLR 72904 NM_001204197 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr17-1265 chr17 49077126 49077336 + 20.9 0.000 Intergenic LTR108e_Mam|LTR|ERVL -55229 NM_001159388 124872 Hs.374679 NM_153446 ENSG00000167080 B4GALNT2 B4GALT|GALGT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 protein-coding chr2-1545 chr2 204950721 204950931 + 20.9 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 405351 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr20-281 chr20 38446475 38446685 + 20.9 0.000 promoter-TSS (NR_003239) promoter-TSS (NR_003239) -74 NR_003239 128439 Hs.16936 NM_139016 ENSG00000174365 SNHG11 C20orf198|LINC00101|NCRNA00101 small nucleolar RNA host gene 11 ncRNA chr1-2839 chr1 93255347 93255557 + 20.9 0.000 intron (NM_001306076, intron 24 of 28) AluJb|SINE|Alu 74736 NM_206886 343099 Hs.482873 NM_206886 ENSG00000122483 CCDC18 NY-SAR-41 coiled-coil domain containing 18 protein-coding chr8-439 chr8 94417762 94417972 + 20.9 0.000 intron (NM_012415, intron 3 of 14) intron (NM_012415, intron 3 of 14) 19077 NM_001256141 100861412 Hs.30561 NM_001256141 ENSG00000265817 FSBP - fibrinogen silencer binding protein protein-coding chr17-547 chr17 75815015 75815225 + 20.9 0.000 intron (NM_001080419, intron 6 of 15) intron (NM_001080419, intron 6 of 15) 29597 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr15-504 chr15 38072811 38073021 + 20.9 0.000 promoter-TSS (NR_147201) promoter-TSS (NR_147201) 74 NR_147199 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr1-2082 chr1 48341343 48341553 + 20.9 0.000 intron (NM_001286238, intron 11 of 12) MER44C|DNA|TcMar-Tigger 118732 NM_001135181 200010 Hs.37890 NM_001011547 ENSG00000117834 SLC5A9 SGLT4 solute carrier family 5 member 9 protein-coding chr10-1049 chr10 70695642 70695852 + 20.9 0.000 intron (NM_080722, intron 2 of 21) L2|LINE|L2 23241 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr11-1070 chr11 68659246 68659456 + 20.9 0.000 Intergenic Intergenic -25193 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr7-1121 chr7 504478 504688 + 20.9 0.000 intron (NM_002607, intron 4 of 6) intron (NM_002607, intron 4 of 6) 15261 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr9-521 chr9 130239884 130240094 + 20.9 0.000 Intergenic Intergenic -1398 NR_162140 113219459 NR_162140 MIR12126 - microRNA 12126 ncRNA chr3-860 chr3 115436837 115437047 + 20.9 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -186568 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr4-315 chr4 39458985 39459195 + 20.9 0.000 promoter-TSS (NM_000661) promoter-TSS (NM_000661) 34 NM_001363700 11019 Hs.550502 NM_006859 ENSG00000121897 LIAS HGCLAS|HUSSY-01|LAS|LIP1|LS|PDHLD lipoic acid synthetase protein-coding chr1-546 chr1 222465488 222465698 + 20.9 0.000 Intergenic CpG 82511 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr1-1249 chr1 172746361 172746571 + 20.9 0.000 Intergenic Intergenic 87363 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr8-827 chr8 32715182 32715392 + 20.9 0.000 intron (NM_001322205, intron 1 of 8) intron (NM_001322205, intron 1 of 8) -6466 NM_001159996 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr2-1103 chr2 101844450 101844660 + 20.9 0.000 intron (NM_145686, intron 12 of 30) intron (NM_145686, intron 12 of 30) -138910 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr4-370 chr4 17511703 17511913 + 20.9 0.000 intron (NR_156494, intron 1 of 5) CpG 282 NM_000320 5860 Hs.75438 NM_000320 ENSG00000151552 QDPR DHPR|HDHPR|PKU2|SDR33C1 quinoid dihydropteridine reductase protein-coding chr4-559 chr4 84870555 84870765 + 20.9 0.000 intron (NM_014991, intron 3 of 67) L1MCa|LINE|L1 -94956 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr14-286 chr14 55027211 55027421 + 20.9 0.000 promoter-TSS (NM_001008396) promoter-TSS (NM_001008396) 80 NM_199421 122809 Hs.744302 NM_080867 ENSG00000180008 SOCS4 SOCS7 suppressor of cytokine signaling 4 protein-coding chr11-1248 chr11 86218654 86218864 + 20.9 0.000 Intergenic Intergenic -25625 NM_001308007 8726 Hs.503510 NM_003797 ENSG00000074266 EED COGIS|HEED|WAIT1 embryonic ectoderm development protein-coding chr12-551 chr12 123670946 123671156 + 20.9 0.000 promoter-TSS (NM_024809) promoter-TSS (NM_024809) -62 NM_001143850 79867 Hs.167165 NM_024809 ENSG00000168778 TCTN2 C12orf38|JBTS24|MKS8|TECT2 tectonic family member 2 protein-coding chr14-596 chr14 95496703 95496913 + 20.9 0.000 Intergenic Intergenic -20973 NM_001363692 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|KASH3|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chr9-1068 chr9 127607552 127607762 + 20.9 0.000 Intergenic Charlie8|DNA|hAT-Charlie -4620 NM_003165 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr3-438 chr3 12484218 12484428 + 20.9 0.000 promoter-TSS (NM_001321279) promoter-TSS (NM_001321279) -109 NM_001321277 80746 Hs.335550 NM_025265 ENSG00000154743 TSEN2 PCH2B|SEN2|SEN2L tRNA splicing endonuclease subunit 2 protein-coding chr18-343 chr18 59623744 59623954 + 20.9 0.000 intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) 73574 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr19-532 chr19 29845018 29845228 + 20.9 0.000 Intergenic CpG 33132 NM_001322262 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr4-720 chr4 140309696 140309906 + 20.9 0.000 intron (NR_033939, intron 2 of 4) LTR103b_Mam|LTR|ERV1? -33642 NM_001153635 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr2-1740 chr2 8836210 8836420 + 20.9 0.000 intron (NM_001348732, intron 1 of 28) intron (NM_001348732, intron 1 of 28) 1298 NM_001348732 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr14-207 chr14 52707194 52707404 + 20.9 0.000 promoter-TSS (NM_001366414) promoter-TSS (NM_001366414) 99 NR_158967 5706 Hs.156171 NM_002806 ENSG00000100519 PSMC6 SUG2|p42 proteasome 26S subunit, ATPase 6 protein-coding chrX-148 chrX 135032026 135032236 + 20.9 0.000 promoter-TSS (NM_001078171) promoter-TSS (NM_001078171) -224 NM_001078171 8933 Hs.522789 NM_003928 ENSG00000134590 RTL8C CXX1|FAM127A|MAR8C|MART8C|Mar8|Mart8|SIRH5 retrotransposon Gag like 8C protein-coding chr18-158 chr18 21682680 21682890 + 20.9 0.000 promoter-TSS (NR_031565) promoter-TSS (NR_031565) -733 NR_031565 100302135 NR_031565 ENSG00000221493 MIR320C1 MIR320C-1|MIRN320C1|hsa-mir-320c-1|mir-320c-1 microRNA 320c-1 ncRNA chr22-376 chr22 41301351 41301561 + 20.9 0.000 promoter-TSS (NM_017590) promoter-TSS (NM_017590) -69 NM_017590 23264 Hs.592188 NM_017590 ENSG00000100403 ZC3H7B ROXAN1|RoXaN zinc finger CCCH-type containing 7B protein-coding chr4-642 chr4 86957406 86957616 + 20.9 0.000 intron (NM_001166693, intron 2 of 20) intron (NM_001166693, intron 2 of 20) 22509 NM_001166693 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr1-508 chr1 54406377 54406587 + 20.9 0.000 promoter-TSS (NM_145716) promoter-TSS (NM_145716) -88 NM_018070 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr1-852 chr1 9626959 9627169 + 20.9 0.000 Intergenic Intergenic -24667 NM_005026 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr8-419 chr8 143435838 143436048 + 20.9 0.000 Intergenic Intergenic -5211 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr17-1065 chr17 78159824 78160034 + 20.9 0.000 intron (NM_001163075, intron 2 of 4) L1MB5|LINE|L1 -8616 NM_004710 9144 Hs.464210 NM_004710 ENSG00000108639 SYNGR2 - synaptogyrin 2 protein-coding chr17-478 chr17 21199408 21199618 + 20.9 0.000 intron (NM_003876, intron 1 of 1) intron (NM_003876, intron 1 of 1) 15082 NR_024547 8834 Hs.592945 NM_003876 ENSG00000178307 TMEM11 C17orf35|PM1|PMI transmembrane protein 11 protein-coding chr7-973 chr7 18520765 18520975 + 20.9 0.000 intron (NM_001204147, intron 1 of 9) intron (NM_001204147, intron 1 of 9) 11600 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr12-381 chr12 1527822 1528032 + 20.9 0.000 non-coding (NR_160736, exon 2 of 2) non-coding (NR_160736, exon 2 of 2) 4265 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr1-1575 chr1 21451366 21451576 + 20.9 0.000 intron (NM_001256417, intron 2 of 13) intron (NM_001256417, intron 2 of 13) 11334 NM_001256416 84224 Hs.325422 NM_032264 ENSG00000142794 NBPF3 AE2 NBPF member 3 protein-coding chr14-112 chr14 52951006 52951216 + 20.9 0.000 promoter-TSS (NM_001135000) promoter-TSS (NM_001135000) -14 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr6-161 chr6 35497285 35497495 + 20.7 0.000 promoter-TSS (NM_003214) promoter-TSS (NM_003214) -311 NM_003214 7005 Hs.485205 NM_003214 ENSG00000007866 TEAD3 DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5 TEA domain transcription factor 3 protein-coding chr8-358 chr8 122969675 122969885 + 20.7 0.000 intron (NM_001362797, intron 4 of 4) intron (NM_001362797, intron 4 of 4) 55992 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr16-677 chr16 88332116 88332326 + 20.7 0.000 Intergenic Intergenic -95250 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr20-452 chr20 38676383 38676593 + 20.7 0.000 Intergenic Intergenic -47998 NM_080552 140679 Hs.179080 NM_080552 ENSG00000101438 SLC32A1 VGAT|VIAAT solute carrier family 32 member 1 protein-coding chr8-503 chr8 130404702 130404912 + 20.7 0.000 intron (NM_001362925, intron 1 of 29) MLT1H|LTR|ERVL-MaLR 38853 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr6-726 chr6 133254621 133254831 + 20.7 0.000 intron (NM_172103, intron 1 of 18) intron (NM_172103, intron 1 of 18) 13227 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr9-1175 chr9 82354441 82354651 + 20.7 0.000 Intergenic Intergenic 365774 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr9-1055 chr9 70220369 70220579 + 20.7 0.000 intron (NR_125850, intron 12 of 13) intron (NR_125850, intron 12 of 13) 38400 NR_039990 100507299 Hs.556816 NR_039990 SMC5-AS1 MAMDC2-AS2 SMC5 antisense RNA 1 (head to head) ncRNA chr8-482 chr8 121546186 121546396 + 20.7 0.000 Intergenic Intergenic -93055 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr9-2119 chr9 95794402 95794612 + 20.7 0.000 Intergenic Intergenic -81184 NM_020207 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr7-536 chr7 78019708 78019918 + 20.7 0.000 exon (NM_012301, exon 22 of 22) exon (NM_012301, exon 22 of 22) 179683 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr6-254 chr6 44256927 44257137 + 20.7 0.000 intron (NM_001286511, intron 1 of 3) CpG 256 NM_001286510 347734 Hs.182885 NM_178148 ENSG00000157593 SLC35B2 PAPST1|SLL|UGTrel4 solute carrier family 35 member B2 protein-coding chr3-1027 chr3 138114243 138114453 + 20.7 0.000 promoter-TSS (NM_001170538) promoter-TSS (NM_001170538) -868 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr3-1988 chr3 156615745 156615955 + 20.7 0.000 Intergenic Intergenic -58740 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr1-1633 chr1 163035876 163036086 + 20.7 0.000 Intergenic Intergenic -32625 NM_001102445 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G protein signaling 4 protein-coding chr22-575 chr22 48492396 48492606 + 20.7 0.000 intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) 2948 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr18-229 chr18 63161893 63162103 + 20.7 0.000 intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 157382 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr17-1528 chr17 75982074 75982284 + 20.7 0.000 intron (NM_001113324, intron 1 of 3) MER39B|LTR|ERV1 2939 NM_001113324 100134934 Hs.593566 NM_001113324 ENSG00000257949 TEN1 C17orf106 TEN1 subunit of CST complex protein-coding chr2-1509 chr2 32425961 32426171 + 20.7 0.000 intron (NM_016252, intron 10 of 73) L1MB4|LINE|L1 69038 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr2-1709 chr2 197079456 197079666 + 20.7 0.000 intron (NM_001367496, intron 15 of 27) intron (NM_001367496, intron 15 of 27) -118430 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr3-316 chr3 10011078 10011288 + 20.7 0.000 promoter-TSS (NR_148535) promoter-TSS (NR_148535) -65 NR_148535 55831 Hs.475392 NM_018447 ENSG00000125037 EMC3 POB|TMEM111 ER membrane protein complex subunit 3 protein-coding chr18-116 chr18 10016238 10016448 + 20.7 0.000 Intergenic Intergenic 102327 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr15-446 chr15 78860033 78860243 + 20.7 0.000 Intergenic OldhAT1|DNA|hAT-Ac -12643 NM_001265603 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chr3-1250 chr3 159672770 159672980 + 20.7 0.000 intron (NM_001197108, intron 1 of 6) MIR|SINE|MIR 95737 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr3-874 chr3 177673402 177673612 + 20.7 0.000 intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -143358 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr2-737 chr2 169479658 169479868 + 20.7 0.000 intron (NM_152384, intron 1 of 11) CpG 269 NM_152384 129880 Hs.233398 NM_152384 ENSG00000163093 BBS5 - Bardet-Biedl syndrome 5 protein-coding chr7-1011 chr7 2383526 2383736 + 20.7 0.000 Intergenic Intergenic -19980 NM_001243794 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr2-1217 chr2 234939528 234939738 + 20.7 0.000 Intergenic Intergenic -12384 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr1-2245 chr1 176207353 176207563 + 20.7 0.000 promoter-TSS (NM_001001740) promoter-TSS (NM_001001740) -172 NM_022457 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr10-1052 chr10 87547965 87548175 + 20.7 0.000 intron (NM_001178118, intron 4 of 4) intron (NM_001178118, intron 4 of 4) 40237 NM_001178118 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding chr13-446 chr13 44815722 44815932 + 20.7 0.000 Intergenic Intergenic -6197 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr11-378 chr11 47565429 47565639 + 20.7 0.000 promoter-TSS (NM_175732) promoter-TSS (NM_175732) -65 NM_175732 114971 Hs.656205 NM_175732 ENSG00000110536 PTPMT1 DUSP23|MOSP|PLIP|PNAS-129 protein tyrosine phosphatase mitochondrial 1 protein-coding chr22-358 chr22 31676772 31676982 + 20.7 0.000 Intergenic Intergenic -14313 NM_001326411 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr20-402 chr20 57947919 57948129 + 20.7 0.000 Intergenic Intergenic -55880 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr1-600 chr1 91021399 91021609 + 20.7 0.000 promoter-TSS (NM_016620) promoter-TSS (NM_016620) 4 NM_016620 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding chr15-347 chr15 84928304 84928514 + 20.7 0.000 intron (NM_001287761, intron 11 of 14) intron (NM_001287761, intron 11 of 14) 43747 NM_001287762 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr19-692 chr19 18291892 18292102 + 20.7 0.000 Intergenic CpG 9920 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA chr1-614 chr1 44739641 44739851 + 20.7 0.000 promoter-TSS (NM_001297655) promoter-TSS (NM_001297655) -91 NM_001297655 11004 Hs.720061 NM_006845 ENSG00000142945 KIF2C CT139|KNSL6|MCAK kinesin family member 2C protein-coding chr12-401 chr12 48925437 48925647 + 20.7 0.000 promoter-TSS (NM_001143782) promoter-TSS (NM_001143782) 5 NM_001143782 51303 Hs.655103 NM_016594 ENSG00000134285 FKBP11 FKBP19 FKBP prolyl isomerase 11 protein-coding chr9-882 chr9 101533533 101533743 + 20.7 0.000 promoter-TSS (NM_019592) promoter-TSS (NM_019592) -215 NM_019592 56254 Hs.729085 NM_019592 ENSG00000155827 RNF20 BRE1|BRE1A|hBRE1 ring finger protein 20 protein-coding chr12-251 chr12 8180335 8180545 + 20.7 0.000 TTS (NM_001004328) TTS (NM_001004328) 231 NR_026788 440078 Hs.512257 NR_026788 ENSG00000226711 FAM66C - family with sequence similarity 66 member C ncRNA chr13-918 chr13 54552846 54553056 + 20.7 0.000 Intergenic L1PB2|LINE|L1 -240903 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr22-206 chr22 50244871 50245081 + 20.7 0.000 promoter-TSS (NM_020461) promoter-TSS (NM_020461) 47 NM_020461 85378 Hs.336431 NM_020461 ENSG00000128159 TUBGCP6 GCP-6|GCP6|MCCRP|MCCRP1|MCPHCR tubulin gamma complex associated protein 6 protein-coding chr20-405 chr20 3687100 3687310 + 20.7 0.000 3' UTR (NM_001367089, exon 20 of 20) 3' UTR (NM_001367089, exon 20 of 20) -4515 NM_153202 80332 Hs.173716 NM_025220 ENSG00000149451 ADAM33 C20orf153|DJ964F7.1 ADAM metallopeptidase domain 33 protein-coding chr5-495 chr5 137735780 137735990 + 20.7 0.000 5' UTR (NM_017415, exon 1 of 15) 5' UTR (NM_017415, exon 1 of 15) 204 NM_017415 26249 Hs.655084 NM_017415 ENSG00000146021 KLHL3 PHA2D kelch like family member 3 protein-coding chr8-619 chr8 124539094 124539304 + 20.7 0.000 promoter-TSS (NM_005005) promoter-TSS (NM_005005) 76 NM_005005 4715 Hs.15977 NM_005005 ENSG00000147684 NDUFB9 B22|CI-B22|LYRM3|MC1DN24|UQOR22 NADH:ubiquinone oxidoreductase subunit B9 protein-coding chr2-2086 chr2 222863158 222863368 + 20.7 0.000 intron (NM_001354159, intron 1 of 14) intron (NM_001354159, intron 1 of 14) 2227 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr2-742 chr2 12106445 12106655 + 20.7 0.000 intron (NR_110196, intron 2 of 5) intron (NR_110196, intron 2 of 5) -92580 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr8-312 chr8 136740557 136740767 + 20.7 0.000 intron (NR_147196, intron 2 of 5) LTR78B|LTR|ERV1 209864 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chrX-177 chrX 135344542 135344752 + 20.7 0.000 promoter-TSS (NM_007131) promoter-TSS (NM_007131) -149 NM_152695 203523 Hs.28780 NM_152695 ENSG00000173275 ZNF449 ZSCAN19 zinc finger protein 449 protein-coding chr22-89 chr22 20020962 20021172 + 20.7 0.000 promoter-TSS (NM_001322146) promoter-TSS (NM_001322146) -2 NM_001283186 128989 Hs.474233 NM_152906 ENSG00000183597 TANGO2 C22orf25|MECRCN transport and golgi organization 2 homolog protein-coding chr2-750 chr2 121075228 121075438 + 20.7 0.000 Intergenic Intergenic 209869 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr6-549 chr6 9766361 9766571 + 20.7 0.000 Intergenic Intergenic -638036 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr1-851 chr1 6960465 6960675 + 20.7 0.000 intron (NM_001349608, intron 2 of 21) L2c|LINE|L2 175116 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr10-591 chr10 122475690 122475900 + 20.7 0.000 intron (NM_002775, intron 1 of 8) intron (NM_002775, intron 1 of 8) 14242 NM_002775 5654 Hs.501280 NM_002775 ENSG00000166033 HTRA1 ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11 HtrA serine peptidase 1 protein-coding chr13-323 chr13 31749994 31750204 + 20.7 0.000 intron (NM_130806, intron 1 of 17) intron (NM_130806, intron 1 of 17) 10557 NM_001166058 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr2-642 chr2 71068313 71068523 + 20.7 0.000 promoter-TSS (NM_017567) promoter-TSS (NM_017567) 122 NM_001330426 55577 Hs.7036 NM_017567 ENSG00000124357 NAGK GNK|HSA242910 N-acetylglucosamine kinase protein-coding chr20-406 chr20 7650644 7650854 + 20.7 0.000 Intergenic Intergenic 279141 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chr2-864 chr2 178414721 178414931 + 20.7 0.000 intron (NR_110206, intron 1 of 2) intron (NR_110206, intron 1 of 2) 1167 NR_110204 101927027 Hs.715694 NR_110204 ENSG00000223960 CHROMR CHROME|PRKRA-AS1 cholesterol induced regulator of metabolism RNA ncRNA chr1-1228 chr1 26378159 26378369 + 20.7 0.000 Intergenic Intergenic -5470 NM_173574 257101 Hs.353208 NM_173574 ENSG00000176083 ZNF683 Hobit zinc finger protein 683 protein-coding chr21-126 chr21 35084963 35085173 + 20.7 0.000 Intergenic Intergenic -35770 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr16-418 chr16 31180665 31180875 + 20.7 0.000 intron (NM_004960, intron 1 of 14) CpG 660 NM_001170634 2521 Hs.46894 NM_004960 ENSG00000089280 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding chr13-581 chr13 76937629 76937839 + 20.7 0.000 Intergenic Intergenic 9283 NR_026983 690 Hs.567241 NR_026983 BTF3P11 BTF3L1|HUMBTFB|OCIF|OPG|TNFRSF11B basic transcription factor 3 pseudogene 11 pseudo chr1-1510 chr1 27961165 27961375 + 20.7 0.000 intron (NM_018053, intron 1 of 2) intron (NM_018053, intron 1 of 2) 1808 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr10-1073 chr10 133405841 133406051 + 20.7 0.000 intron (NM_138384, intron 9 of 10) L1MA4|LINE|L1 11789 NM_138384 92170 Hs.501578 NM_138384 ENSG00000148824 MTG1 GTP|GTPBP7 mitochondrial ribosome associated GTPase 1 protein-coding chr2-1341 chr2 158990582 158990792 + 20.7 0.000 intron (NM_001350065, intron 1 of 27) L2c|LINE|L2 22047 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr1-1264 chr1 8848895 8849105 + 20.7 0.000 Intergenic (CAGC)n|Simple_repeat|Simple_repeat 17590 NR_106786 102465436 NR_106786 ENSG00000274258 MIR6728 hsa-mir-6728 microRNA 6728 ncRNA chr4-810 chr4 98510768 98510978 + 20.7 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 147738 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr2-1233 chr2 57720791 57721001 + 20.7 0.000 Intergenic Intergenic -186755 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr19-1182 chr19 16104262 16104472 + 20.7 0.000 Intergenic AluSz|SINE|Alu -7522 NM_005370 4218 Hs.642874 NM_005370 ENSG00000167461 RAB8A MEL|RAB8 RAB8A, member RAS oncogene family protein-coding chr2-2573 chr2 228600313 228600523 + 20.7 0.000 intron (NR_151716, intron 1 of 3) ERVL-E-int|LTR|ERVL 10977 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr22-822 chr22 21797740 21797950 + 20.7 0.000 intron (NM_002745, intron 4 of 8) intron (NM_002745, intron 4 of 8) -62051 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr2-1173 chr2 7685767 7685977 + 20.7 0.000 Intergenic Intergenic 213783 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr21-29 chr21 31731985 31732195 + 20.7 0.000 promoter-TSS (NM_001145445) promoter-TSS (NM_001145445) 28 NM_001145445 57466 Hs.17255 NM_020706 ENSG00000156304 SCAF4 SFRS15|SRA4 SR-related CTD associated factor 4 protein-coding chr2-980 chr2 65187329 65187539 + 20.7 0.000 Intergenic Intergenic -40261 NM_005722 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr3-1439 chr3 29324455 29324665 + 20.7 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 43248 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr2-1056 chr2 191334153 191334363 + 20.7 0.000 intron (NM_012223, intron 4 of 28) L3|LINE|CR1 88854 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr1-653 chr1 91404577 91404787 + 20.7 0.000 intron (NM_001017975, intron 1 of 38) CpG 155 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr13-353 chr13 44268053 44268263 + 20.7 0.000 Intergenic Intergenic -71958 NR_107046 102465876 NR_107046 ENSG00000276319 MIR8079 hsa-mir-8079 microRNA 8079 ncRNA chr8-678 chr8 97906408 97906618 + 20.7 0.000 intron (NM_002380, intron 2 of 18) intron (NM_002380, intron 2 of 18) 37449 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr8-1051 chr8 17155786 17155996 + 20.7 0.000 promoter-TSS (NM_016353) promoter-TSS (NM_016353) -591 NM_016353 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr1-976 chr1 58784025 58784235 + 20.7 0.000 promoter-TSS (NM_002228) promoter-TSS (NM_002228) -83 NM_002228 3725 Hs.696684 NM_002228 ENSG00000177606 JUN AP-1|AP1|c-Jun|p39 Jun proto-oncogene, AP-1 transcription factor subunit protein-coding chr1-1477 chr1 115190193 115190403 + 20.7 0.000 Intergenic Intergenic -92736 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr20-96 chr20 59042796 59043006 + 20.7 0.000 promoter-TSS (NM_016045) promoter-TSS (NM_016045) -55 NR_037929 100533975 Hs.656865 NR_037929 SLMO2-ATP5E - SLMO2-ATP5E readthrough ncRNA chr20-484 chr20 35339193 35339403 + 20.7 0.000 intron (NM_001184977, intron 5 of 7) intron (NM_001184977, intron 5 of 7) -46873 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr2-673 chr2 241161762 241161972 + 20.7 0.000 intron (NM_001282413, intron 5 of 8) intron (NM_001282413, intron 5 of 8) 11400 NM_002712 5510 Hs.36587 NM_002712 ENSG00000115685 PPP1R7 SDS22 protein phosphatase 1 regulatory subunit 7 protein-coding chr10-926 chr10 119686723 119686933 + 20.7 0.000 Intergenic Intergenic 35458 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr17-1361 chr17 64081878 64082088 + 20.7 0.000 intron (NM_001433, intron 2 of 21) intron (NM_001433, intron 2 of 21) 48161 NM_001433 2081 Hs.133982 NM_001433 ENSG00000178607 ERN1 IRE1|IRE1P|IRE1a|hIRE1p endoplasmic reticulum to nucleus signaling 1 protein-coding chr22-450 chr22 46193977 46194187 + 20.7 0.000 intron (NM_001362872, intron 3 of 8) intron (NM_001362872, intron 3 of 8) 43287 NM_001362873 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr13-254 chr13 110916964 110917174 + 20.7 0.000 Intergenic Intergenic -2000 NR_104586 55608 Hs.525163 NM_017664 ENSG00000088448 ANKRD10 - ankyrin repeat domain 10 protein-coding chr12-496 chr12 402180 402390 + 20.7 0.000 intron (NM_001130146, intron 1 of 11) intron (NM_001130146, intron 1 of 11) 641 NM_032358 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr6-369 chr6 35259349 35259559 + 20.7 0.000 promoter-TSS (NM_003427) promoter-TSS (NM_003427) -281 NM_003427 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr18-112 chr18 35240803 35241013 + 20.7 0.000 promoter-TSS (NM_032347) promoter-TSS (NM_032347) -126 NM_032347 84307 Hs.591061 NM_032347 ENSG00000186812 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding chr16-466 chr16 67393469 67393679 + 20.7 0.000 promoter-TSS (NM_016140) promoter-TSS (NM_016140) -76 NM_016140 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr5-666 chr5 138536712 138536922 + 20.7 0.000 intron (NM_001291975, intron 2 of 11) intron (NM_001291975, intron 2 of 11) 4894 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr11-1002 chr11 10309418 10309628 + 20.7 0.000 intron (NR_103765, intron 1 of 3) intron (NR_103765, intron 1 of 3) 1210 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA chrX-330 chrX 74179153 74179363 + 20.7 0.000 intron (NR_028379, intron 5 of 6) MamRTE1|LINE|RTE-BovB 39203 NR_030398 693122 NR_030398 ENSG00000202566 MIR421 MIRN421|hsa-mir-421 microRNA 421 ncRNA chr17-1315 chr17 78828536 78828746 + 20.7 0.000 intron (NM_001321291, intron 5 of 20) intron (NM_001321291, intron 5 of 20) 11886 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr12-1023 chr12 40054635 40054845 + 20.7 0.000 intron (NM_052885, intron 1 of 9) intron (NM_052885, intron 1 of 9) 51341 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr12-648 chr12 47014418 47014628 + 20.7 0.000 Intergenic Intergenic -65080 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chr3-357 chr3 87227102 87227312 + 20.7 0.000 promoter-TSS (NM_001244644) promoter-TSS (NM_001244644) -102 NM_001244644 25978 Hs.476930 NM_014043 ENSG00000083937 CHMP2B ALS17|CHMP2.5|DMT1|VPS2-2|VPS2B charged multivesicular body protein 2B protein-coding chr17-332 chr17 4806987 4807197 + 20.7 0.000 promoter-TSS (NM_001243108) promoter-TSS (NM_001243108) -60 NM_001243108 5338 Hs.104519 NM_002663 ENSG00000129219 PLD2 PLD1C phospholipase D2 protein-coding chr4-160 chr4 2764208 2764418 + 20.7 0.000 Intergenic CpG -7977 NM_024309 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr1-1121 chr1 55214795 55215005 + 20.7 0.000 promoter-TSS (NR_038320) promoter-TSS (NR_038320) 464 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding chr9-437 chr9 128192874 128193084 + 20.7 0.000 promoter-TSS (NM_001257975) promoter-TSS (NM_001257975) -875 NM_001257975 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr8-374 chr8 51178838 51179048 + 20.7 0.000 Intergenic LTR14C|LTR|ERVK 630502 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr7-859 chr7 54811405 54811615 + 20.7 0.000 Intergenic Intergenic 52197 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr2-1479 chr2 108594198 108594408 + 20.7 0.000 intron (NM_001193488, intron 1 of 9) intron (NM_001193488, intron 1 of 9) 5997 NM_001193488 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr1-1215 chr1 235083599 235083809 + 20.7 0.000 Intergenic Intergenic -13886 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA chr2-1351 chr2 222904700 222904910 + 20.7 0.000 intron (NM_004457, intron 3 of 16) intron (NM_004457, intron 3 of 16) 43769 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr4-434 chr4 182143961 182144171 + 20.7 0.000 non-coding (NR_027107, exon 2 of 4) non-coding (NR_027107, exon 2 of 4) 449 NR_125905 90768 Hs.175465 NR_027107 TENM3-AS1 - TENM3 antisense RNA 1 ncRNA chr17-955 chr17 59209997 59210207 + 20.7 0.000 promoter-TSS (NM_018149) promoter-TSS (NM_018149) 92 NM_018149 55181 Hs.7296 NM_018149 ENSG00000167447 SMG8 C17orf71 SMG8 nonsense mediated mRNA decay factor protein-coding chr3-833 chr3 184362004 184362214 + 20.7 0.000 promoter-TSS (NM_001278714) promoter-TSS (NM_001278714) 392 NM_006232 5437 Hs.432574 NM_006232 ENSG00000163882 POLR2H RPABC3|RPB17|RPB8 RNA polymerase II subunit H protein-coding chr5-315 chr5 138338043 138338253 + 20.7 0.000 promoter-TSS (NM_016605) promoter-TSS (NM_016605) -118 NM_001350194 51307 Hs.54056 NM_016605 ENSG00000120709 FAM53C C5orf6 family with sequence similarity 53 member C protein-coding chr3-1239 chr3 132593964 132594174 + 20.7 0.000 intron (NM_032169, intron 13 of 19) intron (NM_032169, intron 13 of 19) -3201 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr3-387 chr3 32502330 32502540 + 20.7 0.000 intron (NM_017801, intron 1 of 3) intron (NM_017801, intron 1 of 3) 417 NM_017801 54918 Hs.380627 NM_017801 ENSG00000091317 CMTM6 CKLFSF6|PRO2219 CKLF like MARVEL transmembrane domain containing 6 protein-coding chr5-312 chr5 112737773 112737983 + 20.7 0.000 promoter-TSS (NM_001354898) promoter-TSS (NM_001354898) -7 NM_001354904 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding chr9-729 chr9 122913185 122913395 + 20.7 0.000 promoter-TSS (NM_006626) promoter-TSS (NM_006626) 33 NM_006626 10773 Hs.654596 NM_006626 ENSG00000186130 ZBTB6 ZID|ZNF482 zinc finger and BTB domain containing 6 protein-coding chr19-1468 chr19 1795815 1796025 + 20.7 0.000 exon (NM_138813, exon 18 of 29) exon (NM_138813, exon 18 of 29) 16356 NM_001178002 148229 Hs.306212 NM_138813 ENSG00000130270 ATP8B3 ATPIK ATPase phospholipid transporting 8B3 protein-coding chr12-365 chr12 7936308 7936518 + 20.6 0.000 promoter-TSS (NM_006931) promoter-TSS (NM_006931) -226 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr14-238 chr14 69153170 69153380 + 20.6 0.000 promoter-TSS (NM_001284206) promoter-TSS (NM_001284206) -78 NM_001284206 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr19-1056 chr19 4390774 4390984 + 20.6 0.000 intron (NM_003025, intron 1 of 9) intron (NM_003025, intron 1 of 9) 9668 NM_001199943 6455 Hs.97616 NM_003025 ENSG00000141985 SH3GL1 CNSA1|EEN|SH3D2B|SH3P8 SH3 domain containing GRB2 like 1, endophilin A2 protein-coding chr13-207 chr13 76885543 76885753 + 20.6 0.000 exon (NM_138444, exon 1 of 1) exon (NM_138444, exon 1 of 1) 757 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr17-676 chr17 38922825 38923035 + 20.6 0.000 Intergenic Intergenic -2238 NR_038847 100505576 Hs.634043 NR_038847 ENSG00000263874 LINC00672 - long intergenic non-protein coding RNA 672 ncRNA chr16-563 chr16 85799030 85799240 + 20.6 0.000 promoter-TSS (NM_001318786) promoter-TSS (NM_001318786) 409 NM_001142288 10328 Hs.173162 NM_006067 ENSG00000131148 EMC8 C16orf2|C16orf4|COX4NB|FAM158B|NOC4 ER membrane protein complex subunit 8 protein-coding chr1-1203 chr1 149936714 149936924 + 20.6 0.000 promoter-TSS (NM_181873) promoter-TSS (NM_181873) 60 NM_001145862 10903 Hs.425144 NM_006697 ENSG00000014914 MTMR11 CRA myotubularin related protein 11 protein-coding chr6-632 chr6 46325846 46326056 + 20.6 0.000 promoter-TSS (NM_005822) promoter-TSS (NM_005822) -59 NM_005822 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr12-1436 chr12 78490905 78491115 + 20.6 0.000 Intergenic Intergenic -131264 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr19-944 chr19 48332869 48333079 + 20.6 0.000 non-coding (NR_130317, exon 6 of 6) non-coding (NR_130317, exon 6 of 6) 6975 NM_001313905 2014 Hs.9999 NM_001425 ENSG00000142227 EMP3 YMP epithelial membrane protein 3 protein-coding chr11-1157 chr11 14148763 14148973 + 20.6 0.000 intron (NM_006108, intron 6 of 15) intron (NM_006108, intron 6 of 15) 186145 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr1-1490 chr1 206612248 206612458 + 20.6 0.000 5' UTR (NM_001201478, exon 1 of 13) 5' UTR (NM_001201478, exon 1 of 13) 112 NM_006893 1939 Hs.497581 NM_006893 ENSG00000143486 EIF2D HCA56|LGTN eukaryotic translation initiation factor 2D protein-coding chr4-440 chr4 1324213 1324423 + 20.6 0.000 intron (NM_001297432, intron 4 of 8) intron (NM_001297432, intron 4 of 8) 14527 NM_001297433 10296 Hs.139896 NM_005882 ENSG00000090316 MAEA EMLP|EMP|GID9|HLC-10|P44EMLP|PIG5 macrophage erythroblast attacher protein-coding chr3-1887 chr3 141643417 141643627 + 20.6 0.000 Intergenic Intergenic -19677 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr12-485 chr12 56221248 56221458 + 20.6 0.000 intron (NM_194359, intron 1 of 6) intron (NM_194359, intron 1 of 6) 348 NM_001242826 10193 Hs.524502 NM_005785 ENSG00000181852 RNF41 FLRF|NRDP1|SBBI03 ring finger protein 41 protein-coding chr18-101 chr18 37403112 37403322 + 20.6 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 63287 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr1-1459 chr1 21334778 21334988 + 20.6 0.000 intron (NM_001113348, intron 1 of 18) L2|LINE|L2 10621 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr9-1577 chr9 73157886 73158096 + 20.6 0.000 intron (NM_000700, intron 1 of 12) intron (NM_000700, intron 1 of 12) 6126 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr3-1120 chr3 150148016 150148226 + 20.6 0.000 intron (NR_136187, intron 2 of 2) intron (NR_136187, intron 2 of 2) 51678 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr1-819 chr1 112575476 112575686 + 20.6 0.000 intron (NM_017744, intron 11 of 14) MER44B|DNA|TcMar-Tigger 43560 NM_138727 54879 Hs.201921 NM_017744 ENSG00000007341 ST7L FAM4B|ST7R|STLR suppression of tumorigenicity 7 like protein-coding chr5-880 chr5 65020411 65020621 + 20.6 0.000 Intergenic Intergenic 251586 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr12-398 chr12 124441612 124441822 + 20.6 0.000 intron (NM_001077261, intron 9 of 47) L1MC4a|LINE|L1 -104475 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr9-1027 chr9 125805249 125805459 + 20.6 0.000 intron (NR_024122, intron 2 of 7) L2a|LINE|L2 57171 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr3-1480 chr3 79168141 79168351 + 20.6 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) -148787 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr19-1253 chr19 56076610 56076820 + 20.6 0.000 non-coding (NR_110741, exon 2 of 4) non-coding (NR_110741, exon 2 of 4) 10031 NR_110741 101928886 Hs.434652 NR_110741 ENSG00000267522 LINC01864 - long intergenic non-protein coding RNA 1864 ncRNA chr1-1646 chr1 211680779 211680989 + 20.6 0.000 intron (NR_148994, intron 2 of 3) intron (NR_148994, intron 2 of 3) 5122 NR_148994 91548 Hs.367839 NR_148994 LOC91548 - uncharacterized LOC91548 ncRNA chr10-750 chr10 47552856 47553066 + 20.6 0.000 intron (NR_160414, intron 1 of 15) intron (NR_160414, intron 1 of 15) 539 NR_160414 113939912 Hs.463017 NR_160414 BMS1P2-AGAP9 - BMS1P2-AGAP9 readthrough pseudo chr14-484 chr14 60151680 60151890 + 20.6 0.000 intron (NM_001322282, intron 3 of 5) intron (NM_001322282, intron 3 of 5) 13613 NM_016029 51635 Hs.59719 NM_016029 ENSG00000100612 DHRS7 CGI-86|SDR34C1|retDSR4|retSDR4 dehydrogenase/reductase 7 protein-coding chr10-1237 chr10 76231378 76231588 + 20.6 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 448722 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr14-452 chr14 99623272 99623482 + 20.6 0.000 intron (NM_001329411, intron 1 of 8) intron (NM_001329411, intron 1 of 8) 18839 NM_001329411 84439 Hs.131714 NM_032425 ENSG00000182218 HHIPL1 KIAA1822|UNQ9245 HHIP like 1 protein-coding chr5-646 chr5 142362738 142362948 + 20.6 0.000 intron (NR_120664, intron 3 of 3) MIR|SINE|MIR 37550 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr14-265 chr14 67819754 67819964 + 20.6 0.000 promoter-TSS (NM_001321819) promoter-TSS (NM_001321819) 80 NM_001321810 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr5-1429 chr5 9060110 9060320 + 20.6 0.000 intron (NM_003966, intron 18 of 22) intron (NM_003966, intron 18 of 22) -6320 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr17-420 chr17 73310903 73311113 + 20.6 0.000 intron (NM_012121, intron 1 of 1) CpG 993 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr16-1312 chr16 88658094 88658304 + 20.6 0.000 intron (NM_002461, intron 2 of 9) intron (NM_002461, intron 2 of 9) 4892 NM_002461 4597 Hs.252457 NM_002461 ENSG00000167508 MVD FP17780|MDDase|MPD|POROK7 mevalonate diphosphate decarboxylase protein-coding chr7-1967 chr7 128742340 128742550 + 20.6 0.000 intron (NR_074086, intron 1 of 4) intron (NR_074086, intron 1 of 4) 3086 NR_074086 813 Hs.7753 NM_001219 ENSG00000128595 CALU - calumenin protein-coding chr10-287 chr10 78303256 78303466 + 20.6 0.000 Intergenic CpG 36019 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr20-383 chr20 46070589 46070799 + 20.6 0.000 intron (NM_001348148, intron 1 of 6) intron (NM_001348148, intron 1 of 6) 19268 NM_001348151 57727 Hs.654991 NM_020967 ENSG00000124160 NCOA5 CIA|bA465L10.6 nuclear receptor coactivator 5 protein-coding chr1-1704 chr1 2028330 2028540 + 20.6 0.000 intron (NM_000815, intron 6 of 8) intron (NM_000815, intron 6 of 8) 9090 NM_000815 2563 Hs.113882 NM_000815 ENSG00000187730 GABRD EIG10|EJM7|GEFSP5 gamma-aminobutyric acid type A receptor delta subunit protein-coding chr12-344 chr12 38905519 38905729 + 20.6 0.000 promoter-TSS (NM_153634) promoter-TSS (NM_153634) -33 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr8-1255 chr8 133851268 133851478 + 20.6 0.000 Intergenic Intergenic -35123 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr3-732 chr3 73786591 73786801 + 20.6 0.000 Intergenic Intergenic -22548 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr2-2272 chr2 20930960 20931170 + 20.6 0.000 Intergenic Intergenic -107935 NM_001282719 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr8-677 chr8 89889545 89889755 + 20.6 0.000 Intergenic L2a|LINE|L2 -12218 NM_004337 734 Hs.436445 NM_004337 ENSG00000164823 OSGIN2 C8orf1|hT41 oxidative stress induced growth inhibitor family member 2 protein-coding chr2-1298 chr2 234091792 234092002 + 20.6 0.000 Intergenic Intergenic 41195 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr13-535 chr13 43374835 43375045 + 20.6 0.000 intron (NM_001347966, intron 6 of 17) intron (NM_001347966, intron 6 of 17) -73912 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr8-892 chr8 47479620 47479830 + 20.6 0.000 intron (NM_001080394, intron 8 of 19) L4_A_Mam|LINE|RTE-X -174363 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr1-2741 chr1 29146030 29146240 + 20.6 0.000 Intergenic Intergenic -22232 NM_001003682 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr13-177 chr13 41546431 41546641 + 20.6 0.000 Intergenic MIRc|SINE|MIR 21859 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr16-318 chr16 57092350 57092560 + 20.6 0.000 promoter-TSS (NM_152727) promoter-TSS (NM_152727) -128 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr16-419 chr16 56985588 56985798 + 20.6 0.000 Intergenic Intergenic -3864 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr2-1675 chr2 101617227 101617437 + 20.6 0.000 Intergenic Intergenic -80371 NM_145686 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr13-236 chr13 40190632 40190842 + 20.6 0.000 Intergenic Intergenic 8928 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr1-1367 chr1 36420908 36421118 + 20.6 0.000 intron (NM_001330493, intron 8 of 10) intron (NM_001330493, intron 8 of 10) -2435 NR_145725 109616970 NR_145725 ENSG00000201448 SNORA63C - small nucleolar RNA, H/ACA box 63C snoRNA chr16-641 chr16 19113834 19114044 + 20.6 0.000 promoter-TSS (NR_028028) promoter-TSS (NR_028028) 7 NM_001034841 162073 Hs.530899 NM_001034841 ENSG00000205730 ITPRIPL2 - ITPRIP like 2 protein-coding chr1-923 chr1 93680772 93680982 + 20.6 0.000 intron (NM_001261408, intron 3 of 13) CpG 493 NM_001261409 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr11-787 chr11 6390383 6390593 + 20.6 0.000 promoter-TSS (NM_001007593) promoter-TSS (NM_001007593) 14 NR_027400 6609 Hs.498173 NM_000543 ENSG00000166311 SMPD1 ASM|ASMASE|NPD sphingomyelin phosphodiesterase 1 protein-coding chr14-180 chr14 57268594 57268804 + 20.6 0.000 promoter-TSS (NM_018229) promoter-TSS (NM_018229) 206 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding chrX-176 chrX 119410491 119410701 + 20.6 0.000 intron (NM_145305, intron 3 of 4) intron (NM_145305, intron 3 of 4) 11260 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr16-543 chr16 1706448 1706658 + 20.6 0.000 exon (NM_001318852, exon 1 of 32) exon (NM_001318852, exon 1 of 32) 358 NM_015133 23162 Hs.207763 NM_015133 ENSG00000138834 MAPK8IP3 JIP-3|JIP3|JSAP1|NEDBA|SYD2|syd mitogen-activated protein kinase 8 interacting protein 3 protein-coding chr11-1314 chr11 69588331 69588541 + 20.6 0.000 Intergenic Intergenic -52669 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr16-1267 chr16 56507036 56507246 + 20.6 0.000 intron (NM_031885, intron 5 of 16) intron (NM_031885, intron 5 of 16) 12883 NM_031885 583 Hs.333738 NM_031885 ENSG00000125124 BBS2 BBS|RP74 Bardet-Biedl syndrome 2 protein-coding chr16-614 chr16 87129936 87130146 + 20.6 0.000 Intergenic Intergenic 72257 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr18-211 chr18 48452990 48453200 + 20.6 0.000 Intergenic Intergenic -40510 NM_001371287 chr5-905 chr5 54457484 54457694 + 20.6 0.000 Intergenic Intergenic 1890 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr6-542 chr6 143427334 143427544 + 20.6 0.000 3' UTR (NM_182503, exon 6 of 6) 3' UTR (NM_182503, exon 6 of 6) 15238 NM_001286259 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase tRNA specific 2 protein-coding chr3-1251 chr3 160331165 160331375 + 20.6 0.000 intron (NM_001190242, intron 7 of 18) Tigger7|DNA|TcMar-Tigger 52496 NM_001190242 57560 Hs.478095 NM_020800 ENSG00000068885 IFT80 ATD2|SRTD2|WDR56 intraflagellar transport 80 protein-coding chr1-1614 chr1 108722417 108722627 + 20.6 0.000 exon (NM_001144937, exon 5 of 13) exon (NM_001144937, exon 5 of 13) 9614 NM_001144937 163479 Hs.258253 NM_173532 ENSG00000143107 FNDC7 - fibronectin type III domain containing 7 protein-coding chr3-710 chr3 153599865 153600075 + 20.6 0.000 intron (NR_146713, intron 4 of 6) intron (NR_146713, intron 4 of 6) 115475 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr6-424 chr6 1190404 1190614 + 20.6 0.000 Intergenic Intergenic -89177 NR_027116 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr4-348 chr4 1870352 1870562 + 20.6 0.000 promoter-TSS (NM_001042424) promoter-TSS (NM_001042424) -936 NM_001042424 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr1-1185 chr1 31715302 31715512 + 20.6 0.000 Intergenic Intergenic -11390 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chrX-141 chrX 45781964 45782174 + 20.6 0.000 Intergenic Intergenic -34945 NR_029636 407007 NR_029636 ENSG00000207725 MIR222 MIRN222|miRNA222|mir-222 microRNA 222 ncRNA chr5-1065 chr5 159163678 159163888 + 20.6 0.000 intron (NM_001199383, intron 8 of 10) intron (NM_001199383, intron 8 of 10) 43865 NM_001199382 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chr14-630 chr14 46054661 46054871 + 20.6 0.000 Intergenic LTR37-int|LTR|ERV1 -9393 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA chr20-225 chr20 44552977 44553187 + 20.6 0.000 intron (NM_007066, intron 1 of 3) intron (NM_007066, intron 1 of 3) 21207 NM_007066 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr19-597 chr19 49442861 49443071 + 20.6 0.000 Intergenic CpG -1439 NM_020309 57030 Hs.375616 NM_020309 ENSG00000104888 SLC17A7 BNPI|VGLUT1 solute carrier family 17 member 7 protein-coding chr5-653 chr5 10789266 10789476 + 20.6 0.000 Intergenic Intergenic -28137 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr8-942 chr8 53522307 53522517 + 20.6 0.000 intron (NR_149032, intron 1 of 1) HERV3-int|LTR|ERV1 1553 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr9-762 chr9 98654347 98654557 + 20.6 0.000 intron (NM_005458, intron 1 of 18) L2c|LINE|L2 54483 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr17-1051 chr17 83189678 83189888 + 20.6 0.000 Intergenic Intergenic -37114 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr12-1014 chr12 10385353 10385563 + 20.6 0.000 intron (NR_120430, intron 3 of 3) L1MA5|LINE|L1 4583 NM_007360 22914 Hs.387787 NM_007360 ENSG00000213809 KLRK1 CD314|D12S2489E|KLR|NKG2-D|NKG2D killer cell lectin like receptor K1 protein-coding chr2-1101 chr2 84919893 84920103 + 20.6 0.000 Intergenic MER44B|DNA|TcMar-Tigger 14342 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr8-581 chr8 124924802 124925012 + 20.6 0.000 Intergenic Intergenic -17101 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA chr17-696 chr17 80151336 80151546 + 20.6 0.000 Intergenic Intergenic -4313 NM_014740 9775 Hs.389649 NM_014740 ENSG00000141543 EIF4A3 DDX48|Fal1|MUK34|NMP265|NUK34|RCPS|eIF-4A-III|eIF4A-III|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding chr17-1003 chr17 78935500 78935710 + 20.6 0.000 Intergenic Intergenic -10218 NM_003255 7077 Hs.633514 NM_003255 ENSG00000035862 TIMP2 CSC-21K|DDC8 TIMP metallopeptidase inhibitor 2 protein-coding chr9-791 chr9 130701181 130701391 + 20.6 0.000 intron (NM_001282709, intron 5 of 7) intron (NM_001282709, intron 5 of 7) 7506 NM_014285 23404 Hs.654643 NM_014285 ENSG00000130713 EXOSC2 RRP4|Rrp4p|SHRF|hRrp4p|p7 exosome component 2 protein-coding chr10-1006 chr10 110426046 110426256 + 20.6 0.000 Intergenic Intergenic -71756 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr6-299 chr6 18264609 18264819 + 20.6 0.000 promoter-TSS (NM_001134709) promoter-TSS (NM_001134709) -184 NM_001134709 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr2-1008 chr2 230067215 230067425 + 20.6 0.000 intron (NM_152527, intron 1 of 4) intron (NM_152527, intron 1 of 4) 1604 NM_152527 151473 Hs.504317 NM_152527 ENSG00000163053 SLC16A14 MCT14 solute carrier family 16 member 14 protein-coding chr15-808 chr15 71295360 71295570 + 20.6 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -106406 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr17-893 chr17 44168493 44168703 + 20.6 0.000 Intergenic Intergenic -2106 NM_080863 92591 Hs.534517 NM_080863 ENSG00000161664 ASB16 - ankyrin repeat and SOCS box containing 16 protein-coding chr20-467 chr20 37192294 37192504 + 20.6 0.000 intron (NM_001324306, intron 2 of 15) intron (NM_001324306, intron 2 of 15) -12851 NM_152503 140699 Hs.349125 NM_152503 ENSG00000101353 MROH8 C20orf131|C20orf132 maestro heat like repeat family member 8 protein-coding chr5-1019 chr5 127001909 127002119 + 20.6 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 28544 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chrX-392 chrX 148298856 148299066 + 20.6 0.000 Intergenic MIR3|SINE|MIR -201656 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr7-517 chr7 158829567 158829777 + 20.6 0.000 promoter-TSS (NM_001367773) promoter-TSS (NM_001367773) -163 NM_020728 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr11-862 chr11 96325028 96325238 + 20.6 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -16305 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr5-852 chr5 103450625 103450835 + 20.6 0.000 Intergenic Intergenic 91255 NR_104670 102467212 Hs.641885 NR_104670 ENSG00000248757 LINC02115 - long intergenic non-protein coding RNA 2115 ncRNA chr3-847 chr3 27326757 27326967 + 20.6 0.000 intron (NM_152534, intron 6 of 38) intron (NM_152534, intron 6 of 38) 42521 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr2-1300 chr2 235703128 235703338 + 20.6 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -185312 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr2-512 chr2 62506004 62506214 + 20.6 0.000 promoter-TSS (NM_198276) promoter-TSS (NM_198276) 86 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr20-436 chr20 50761649 50761859 + 20.6 0.000 Intergenic Intergenic 30174 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr15-780 chr15 48493824 48494034 + 20.6 0.000 intron (NM_000138, intron 23 of 65) intron (NM_000138, intron 23 of 65) 151859 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr3-696 chr3 49421275 49421485 + 20.6 0.000 TTS (NM_032316) TTS (NM_032316) 1093 NR_028435 275 Hs.102 NM_000481 ENSG00000145020 AMT GCE|GCST|GCVT|NKH aminomethyltransferase protein-coding chr3-828 chr3 159824371 159824581 + 20.6 0.000 intron (NM_001197113, intron 5 of 10) intron (NM_001197113, intron 5 of 10) -15385 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr5-460 chr5 442936 443146 + 20.6 0.000 promoter-TSS (NM_007277) promoter-TSS (NM_007277) 119 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr13-222 chr13 114200581 114200791 + 20.6 0.000 Intergenic Intergenic -34159 NM_003903 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chr2-1108 chr2 127194127 127194337 + 20.6 0.000 intron (NM_001001665, intron 5 of 7) MER103C|DNA|hAT-Charlie 11535 NM_001001665 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr16-455 chr16 89171515 89171725 + 20.6 0.000 promoter-TSS (NM_004933) promoter-TSS (NM_004933) -128 NM_004933 1013 Hs.148090 NM_004933 ENSG00000129910 CDH15 CDH14|CDH3|CDHM|MCAD|MRD3 cadherin 15 protein-coding chr15-633 chr15 74040577 74040787 + 20.6 0.000 intron (NM_033249, intron 6 of 6) intron (NM_033249, intron 6 of 6) 41868 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr1-2607 chr1 79811235 79811445 + 20.6 0.000 Intergenic Intergenic -724415 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr10-1480 chr10 124943580 124943790 + 20.6 0.000 intron (NM_017580, intron 1 of 8) intron (NM_017580, intron 1 of 8) 1562 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr4-262 chr4 173522171 173522381 + 20.6 0.000 Intergenic CpG -3038 NM_001329597 11341 Hs.7122 NM_007281 ENSG00000164106 SCRG1 SCRG-1 stimulator of chondrogenesis 1 protein-coding chr11-807 chr11 1459799 1460009 + 20.6 0.000 intron (NM_003957, intron 19 of 19) intron (NM_003957, intron 19 of 19) 20982 NM_053005 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr19-871 chr19 5309113 5309323 + 20.6 0.000 intron (NM_002850, intron 1 of 37) MIRc|SINE|MIR 31594 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr2-1537 chr2 174771597 174771807 + 20.6 0.000 Intergenic Intergenic -7230 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr4-413 chr4 41212660 41212870 + 20.6 0.000 intron (NM_173075, intron 1 of 16) intron (NM_173075, intron 1 of 16) 1777 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr20-670 chr20 18632291 18632501 + 20.6 0.000 3' UTR (NM_001318043, exon 5 of 5) 3' UTR (NM_001318043, exon 5 of 5) 44342 NM_001318043 92675 Hs.659442 NM_080820 ENSG00000125821 DTD1 C20orf88|DTD|DUE-B|DUEB|HARS2|pqn-68 D-aminoacyl-tRNA deacylase 1 protein-coding chr1-1869 chr1 97332928 97333138 + 20.6 0.000 intron (NM_000110, intron 16 of 22) intron (NM_000110, intron 16 of 22) 237110 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr13-430 chr13 51684175 51684385 + 20.6 0.000 intron (NM_052950, intron 3 of 11) intron (NM_052950, intron 3 of 11) 99818 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr9-1257 chr9 107222074 107222284 + 20.6 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger -61100 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr22-548 chr22 45552664 45552874 + 20.6 0.000 intron (NM_006486, intron 14 of 16) intron (NM_006486, intron 14 of 16) 49886 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr13-449 chr13 50543932 50544142 + 20.6 0.000 Intergenic Intergenic -16588 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr11-480 chr11 33257081 33257291 + 20.6 0.000 promoter-TSS (NM_005734) promoter-TSS (NM_005734) -195 NM_001048200 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr11-1076 chr11 86740769 86740979 + 20.6 0.000 Intergenic Intergenic -50197 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr11-1398 chr11 3786767 3786977 + 20.6 0.000 intron (NR_157590, intron 1 of 31) intron (NR_157590, intron 1 of 31) 10674 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chr1-1479 chr1 153957932 153958142 + 20.6 0.000 intron (NM_181715, intron 1 of 13) intron (NM_181715, intron 1 of 13) 575 NM_181715 200186 Hs.406392 NM_181715 ENSG00000160741 CRTC2 TORC-2|TORC2 CREB regulated transcription coactivator 2 protein-coding chr17-1122 chr17 39114823 39115033 + 20.6 0.000 intron (NM_020405, intron 2 of 13) MamGypsy2-I|LTR|Gypsy 36709 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr13-297 chr13 110448339 110448549 + 20.6 0.000 intron (NM_001846, intron 18 of 47) intron (NM_001846, intron 18 of 47) 14843 NM_001267044 100129836 Hs.640035 NM_001267044 COL4A2-AS2 - COL4A2 antisense 2 protein-coding chr10-1021 chr10 76352402 76352612 + 20.6 0.000 intron (NM_001305581, intron 6 of 6) MER44B|DNA|TcMar-Tigger -535537 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr8-437 chr8 80029697 80029907 + 20.6 0.000 intron (NM_014018, intron 1 of 2) intron (NM_014018, intron 1 of 2) 457 NM_014018 28957 Hs.521124 NM_014018 ENSG00000147586 MRPS28 HSPC007|MRP-S28|MRP-S35|MRPS35 mitochondrial ribosomal protein S28 protein-coding chr15-469 chr15 70289655 70289865 + 20.6 0.000 Intergenic Intergenic -191843 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr22-324 chr22 35995744 35995954 + 20.6 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) 32688 NM_001082579 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr22-351 chr22 30396916 30397126 + 20.6 0.000 promoter-TSS (NM_012429) promoter-TSS (NM_012429) 3 NM_012429 23541 Hs.335614 NM_012429 ENSG00000100003 SEC14L2 C22orf6|SPF|TAP|TAP1 SEC14 like lipid binding 2 protein-coding chr21-150 chr21 45294620 45294830 + 20.6 0.000 non-coding (NR_026943, exon 3 of 3) non-coding (NR_026943, exon 3 of 3) 6673 NR_026943 642852 Hs.11637 NR_026943 ENSG00000223768 LINC00205 NCRNA00205 long intergenic non-protein coding RNA 205 ncRNA chr10-994 chr10 58029039 58029249 + 20.6 0.000 Intergenic MER68|LTR|ERVL 238750 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr15-477 chr15 92521556 92521766 + 20.6 0.000 Intergenic LTR26C|LTR|ERV1 49984 NR_161370 145858 Hs.367879 NM_153040 C15orf32 - chromosome 15 open reading frame 32 ncRNA chr2-1663 chr2 73205729 73205939 + 20.6 0.000 intron (NM_001134462, intron 1 of 2) AluJb|SINE|Alu 3260 NM_001134462 344022 Hs.694384 NM_001134462 ENSG00000214513 NOTO - notochord homeobox protein-coding chr2-743 chr2 28665140 28665350 + 20.6 0.000 Intergenic Intergenic 70960 NR_145832 100505774 Hs.595909 NR_145832 ENSG00000226833 LOC100505774 - uncharacterized LOC100505774 ncRNA chr12-232 chr12 121467422 121467632 + 20.6 0.000 intron (NM_001005366, intron 12 of 22) CpG -23175 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr1-2542 chr1 6724667 6724877 + 20.5 0.000 promoter-TSS (NR_104620) promoter-TSS (NR_104620) 27 NR_104620 100505887 Hs.250839 NR_104620 LINC01672 NMR long intergenic non-protein coding RNA 1672 ncRNA chr1-959 chr1 218285072 218285282 + 20.5 0.000 promoter-TSS (NM_016052) promoter-TSS (NM_016052) -116 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr2-622 chr2 85785382 85785592 + 20.5 0.000 intron (NM_032827, intron 2 of 2) intron (NM_032827, intron 2 of 2) -1810 NR_106719 102466516 NR_106719 ENSG00000278783 MIR6071 hsa-mir-6071 microRNA 6071 ncRNA chr14-905 chr14 59086432 59086642 + 20.5 0.000 Intergenic L1PA16|LINE|L1 -102130 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr6-718 chr6 108760563 108760773 + 20.5 0.000 intron (NR_033376, intron 3 of 4) intron (NR_033376, intron 3 of 4) 9014 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr3-2006 chr3 13166851 13167061 + 20.5 0.000 Intergenic Intergenic -93527 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr3-1564 chr3 30342381 30342591 + 20.5 0.000 Intergenic Intergenic -176382 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr10-318 chr10 84328411 84328621 + 20.5 0.000 promoter-TSS (NM_001284240) promoter-TSS (NM_001284240) -73 NM_001284241 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr8-899 chr8 67692921 67693131 + 20.5 0.000 intron (NM_020361, intron 1 of 10) intron (NM_020361, intron 1 of 10) 53334 NM_020361 57094 Hs.658850 NM_020361 ENSG00000165078 CPA6 CPAH|ETL5|FEB11 carboxypeptidase A6 protein-coding chr17-857 chr17 50290038 50290248 + 20.5 0.000 Intergenic Intergenic -2288 NR_125805 103752589 Hs.612913 NR_125805 ENSG00000251179 TMEM92-AS1 TCONS_00025237|lncRNA-508851 TMEM92 antisense RNA 1 ncRNA chr9-1299 chr9 114215088 114215298 + 20.5 0.000 intron (NM_032888, intron 12 of 60) MIRc|SINE|MIR 5759 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr4-385 chr4 47839359 47839569 + 20.5 0.000 intron (NR_125881, intron 1 of 2) MIR3|SINE|MIR -1358 NM_001278585 10699 Hs.518618 NM_006587 ENSG00000145244 CORIN ATC2|CRN|Lrp4|PEE5|TMPRSS10 corin, serine peptidase protein-coding chr10-248 chr10 68075089 68075299 + 20.5 0.000 promoter-TSS (NM_001278187) promoter-TSS (NM_001278187) 89 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr1-1167 chr1 100164282 100164492 + 20.5 0.000 intron (NM_144620, intron 3 of 9) MER5A1|DNA|hAT-Charlie 13886 NM_001256387 127495 Hs.44277 NM_144620 ENSG00000122477 LRRC39 - leucine rich repeat containing 39 protein-coding chr3-831 chr3 172367631 172367841 + 20.5 0.000 intron (NM_001135095, intron 23 of 25) intron (NM_001135095, intron 23 of 25) 80720 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr22-323 chr22 30325179 30325389 + 20.5 0.000 intron (NM_001204240, intron 1 of 8) intron (NM_001204240, intron 1 of 8) 1657 NM_031937 83874 Hs.655273 NM_031937 ENSG00000099992 TBC1D10A EPI64|TBC1D10|dJ130H16.1|dJ130H16.2 TBC1 domain family member 10A protein-coding chr6-658 chr6 48664991 48665201 + 20.5 0.000 Intergenic Intergenic -596407 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr16-877 chr16 57863497 57863707 + 20.5 0.000 Intergenic MIR3|SINE|MIR 52965 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding chr1-1253 chr1 181469901 181470111 + 20.5 0.000 Intergenic Intergenic -13511 NM_000721 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr7-373 chr7 143263398 143263608 + 20.5 0.000 promoter-TSS (NM_001143679) promoter-TSS (NM_001143679) 62 NM_015917 373156 Hs.390667 NM_015917 ENSG00000197448 GSTK1 GST|GST 13-13|GST13|GST13-13|GSTK1-1|hGSTK1 glutathione S-transferase kappa 1 protein-coding chr10-870 chr10 12264355 12264565 + 20.5 0.000 Intergenic Intergenic 68272 NM_006023 8872 Hs.412842 NM_006023 ENSG00000151465 CDC123 C10orf7|D123 cell division cycle 123 protein-coding chr11-1213 chr11 8813759 8813969 + 20.5 0.000 intron (NM_005418, intron 3 of 22) intron (NM_005418, intron 3 of 22) -2529 NM_139157 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr17-875 chr17 5422607 5422817 + 20.5 0.000 intron (NM_001033002, intron 2 of 6) intron (NM_001033002, intron 2 of 6) -2973 NM_001320653 4927 Hs.584784 NM_002532 ENSG00000108559 NUP88 FADS4 nucleoporin 88 protein-coding chr8-1019 chr8 144494972 144495182 + 20.5 0.000 intron (NM_001329444, intron 2 of 11) intron (NM_001329444, intron 2 of 11) -9063 NM_005309 2875 Hs.103502 NM_005309 ENSG00000167701 GPT AAT1|ALT1|GPT1 glutamic--pyruvic transaminase protein-coding chr17-897 chr17 56960923 56961133 + 20.5 0.000 promoter-TSS (NM_004645) promoter-TSS (NM_004645) 22 NM_004645 8161 Hs.532795 NM_004645 ENSG00000121058 COIL CLN80|p80-coilin coilin protein-coding chr11-779 chr11 87353057 87353267 + 20.5 0.000 Intergenic Intergenic 315228 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr1-1519 chr1 39738807 39739017 + 20.5 0.000 promoter-TSS (NR_036543) promoter-TSS (NR_036543) 67 NR_036544 10450 Hs.524690 NM_006112 ENSG00000084072 PPIE CYP-33|CYP33 peptidylprolyl isomerase E protein-coding chr19-716 chr19 44141357 44141567 + 20.5 0.000 promoter-TSS (NM_001144824) promoter-TSS (NM_001144824) -92 NM_006630 10780 Hs.235992 NM_006630 ENSG00000263002 ZNF234 HZF4|ZNF269 zinc finger protein 234 protein-coding chr4-576 chr4 10173296 10173506 + 20.5 0.000 Intergenic HERVK9-int|LTR|ERVK -56602 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr6-866 chr6 41917548 41917758 + 20.5 0.000 intron (NR_131160, intron 1 of 2) MER113|DNA|hAT-Charlie 3290 NM_001305456 9477 Hs.278434 NM_004275 ENSG00000124641 MED20 PRO0213|SRB2|TRFP mediator complex subunit 20 protein-coding chr1-1565 chr1 9062196 9062406 + 20.5 0.000 intron (NM_003039, intron 1 of 11) intron (NM_003039, intron 1 of 11) 7334 NM_001328621 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr11-1365 chr11 68542726 68542936 + 20.5 0.000 intron (NR_147971, intron 4 of 24) intron (NR_147971, intron 4 of 24) 82079 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr4-639 chr4 71251179 71251389 + 20.5 0.000 intron (NM_001098484, intron 2 of 25) intron (NM_001098484, intron 2 of 25) 63998 NM_001134742 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr5-589 chr5 134367058 134367268 + 20.5 0.000 promoter-TSS (NM_016508) promoter-TSS (NM_016508) 8 NM_001113575 51265 Hs.719926 NM_016508 ENSG00000006837 CDKL3 NKIAMRE cyclin dependent kinase like 3 protein-coding chr11-933 chr11 64869160 64869370 + 20.5 0.000 intron (NM_006795, intron 2 of 4) intron (NM_006795, intron 2 of 4) 9344 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr10-173 chr10 12129381 12129591 + 20.5 0.000 promoter-TSS (NM_001142628) promoter-TSS (NM_001142628) -155 NM_001142628 55176 Hs.112955 NM_018144 ENSG00000065665 SEC61A2 - SEC61 translocon alpha 2 subunit protein-coding chr2-1398 chr2 69253997 69254207 + 20.5 0.000 Intergenic Intergenic 133125 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr19-1707 chr19 33110220 33110430 + 20.5 0.000 intron (NR_135270, intron 11 of 20) intron (NR_135270, intron 11 of 20) -21789 NM_173479 126248 Hs.211046 NM_173479 ENSG00000166359 WDR88 PQWD WD repeat domain 88 protein-coding chr4-748 chr4 149961924 149962134 + 20.5 0.000 Intergenic AluJb|SINE|Alu -116416 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr1-1773 chr1 20787515 20787725 + 20.5 0.000 promoter-TSS (NM_016287) promoter-TSS (NM_016287) -932 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr2-1525 chr2 85662895 85663105 + 20.5 0.000 intron (NM_198843, intron 9 of 11) intron (NM_198843, intron 9 of 11) 5199 NM_001367281 6439 Hs.512690 NM_000542 ENSG00000168878 SFTPB PSP-B|SFTB3|SFTP3|SMDP1|SP-B surfactant protein B protein-coding chr6-1126 chr6 144189557 144189767 + 20.5 0.000 3' UTR (NM_003764, exon 2 of 2) 3' UTR (NM_003764, exon 2 of 2) 39145 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding chr2-894 chr2 97113118 97113328 + 20.5 0.000 promoter-TSS (NM_001354587) promoter-TSS (NM_001354587) 70 NM_001354587 375248 Hs.541894 NM_198555 ENSG00000135976 ANKRD36 UNQ2430 ankyrin repeat domain 36 protein-coding chr16-706 chr16 2776180 2776390 + 20.5 0.000 intron (NM_207013, intron 2 of 4) intron (NM_207013, intron 2 of 4) 995 NM_207013 6923 Hs.172772 NM_007108 ENSG00000103363 ELOB SIII|TCEB2 elongin B protein-coding chr9-539 chr9 129320696 129320906 + 20.5 0.000 promoter-TSS (NR_149714) promoter-TSS (NR_149714) -215 NR_149714 414318 Hs.449434 NR_149714 C9orf106 - chromosome 9 open reading frame 106 (putative) ncRNA chr16-513 chr16 28538992 28539202 + 20.5 0.000 promoter-TSS (NM_012385) promoter-TSS (NM_012385) -123 NM_001042483 26471 Hs.513463 NM_012385 ENSG00000176046 NUPR1 COM1|P8 nuclear protein 1, transcriptional regulator protein-coding chr2-835 chr2 171531415 171531625 + 20.5 0.000 intron (NM_001127383, intron 1 of 2) AluJb|SINE|Alu 9046 NM_001127383 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr1-933 chr1 205543539 205543749 + 20.5 0.000 Intergenic Intergenic -25370 NM_181644 148808 Hs.567714 NM_181644 ENSG00000174514 MFSD4A MFSD4|UNQ3064 major facilitator superfamily domain containing 4A protein-coding chr22-594 chr22 29308789 29308999 + 20.5 0.000 intron (NM_152236, intron 2 of 5) intron (NM_152236, intron 2 of 5) 1871 NM_152236 10634 Hs.322852 NM_006478 ENSG00000185340 GAS2L1 GAR22 growth arrest specific 2 like 1 protein-coding chr7-837 chr7 131501554 131501764 + 20.5 0.000 3' UTR (NM_005397, exon 8 of 8) 3' UTR (NM_005397, exon 8 of 8) 54969 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr11-861 chr11 86484270 86484480 + 20.5 0.000 intron (NM_001014811, intron 6 of 13) intron (NM_001014811, intron 6 of 13) 109488 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr1-1905 chr1 203744094 203744304 + 20.5 0.000 TTS (NM_001684) TTS (NM_001684) 13622 NR_046213 84719 Hs.661178 NM_032633 LINC00260 C1orf217|NCRNA00260 long intergenic non-protein coding RNA 260 ncRNA chr17-1571 chr17 31085650 31085860 + 20.5 0.000 Intergenic Intergenic 8670 NR_039886 100616266 NR_039886 ENSG00000265444 MIR4733 - microRNA 4733 ncRNA chr14-358 chr14 57833318 57833528 + 20.5 0.000 intron (NM_001352012, intron 1 of 8) MER5B|DNA|hAT-Charlie 31576 NM_001352012 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr17-834 chr17 76515239 76515449 + 20.5 0.000 Intergenic L2|LINE|L2 -12242 NR_033357 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 photoreceptor disc component protein-coding chr7-659 chr7 131249079 131249289 + 20.5 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 78595 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr10-938 chr10 14478761 14478971 + 20.5 0.000 Intergenic Intergenic 42290 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA chr8-625 chr8 461522 461732 + 20.5 0.000 intron (NM_183421, intron 8 of 10) L1MB8|LINE|L1 54125 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr1-2185 chr1 46315776 46315986 + 20.5 0.000 intron (NM_001297566, intron 2 of 2) L2b|LINE|L2 12183 NM_001297566 7388 Hs.481571 NM_006004 ENSG00000173660 UQCRH QCR6|UQCR8 ubiquinol-cytochrome c reductase hinge protein protein-coding chr16-1010 chr16 69057898 69058108 + 20.5 0.000 intron (NM_024562, intron 17 of 17) intron (NM_024562, intron 17 of 17) -47650 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr12-454 chr12 53052586 53052796 + 20.5 0.000 intron (NM_198316, intron 3 of 28) intron (NM_198316, intron 3 of 28) 1747 NR_033854 283335 Hs.657060 NR_033854 ENSG00000257337 LOC283335 - uncharacterized LOC283335 ncRNA chr7-681 chr7 128673007 128673217 + 20.5 0.000 intron (NM_001128926, intron 1 of 4) intron (NM_001128926, intron 1 of 4) 820 NM_001290255 346653 Hs.445236 NM_001012454 ENSG00000205085 FAM71F2 FAM137B family with sequence similarity 71 member F2 protein-coding chr16-656 chr16 88639820 88640030 + 20.5 0.000 exon (NM_013278, exon 3 of 3) exon (NM_013278, exon 3 of 3) 1353 NM_013278 27189 Hs.278911 NM_013278 ENSG00000124391 IL17C CX2|IL-17C interleukin 17C protein-coding chr15-821 chr15 90287402 90287612 + 20.5 0.000 Intergenic Intergenic -21748 NR_102428 10519 Hs.715556 NM_006384 ENSG00000185043 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 protein-coding chr19-435 chr19 4124160 4124370 + 20.5 0.000 promoter-TSS (NM_030662) promoter-TSS (NM_030662) -136 NM_030662 5605 Hs.465627 NM_030662 ENSG00000126934 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding chr3-903 chr3 132659219 132659429 + 20.5 0.000 promoter-TSS (NM_001321239) promoter-TSS (NM_001321239) -173 NM_024818 79876 Hs.170737 NM_024818 ENSG00000081307 UBA5 EIEE44|SCAR24|THIFP1|UBE1DC1 ubiquitin like modifier activating enzyme 5 protein-coding chr1-1544 chr1 230851291 230851501 + 20.5 0.000 intron (NM_001136494, intron 4 of 5) intron (NM_001136494, intron 4 of 5) 4611 NM_001136495 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr1-1515 chr1 34852748 34852958 + 20.5 0.000 3' UTR (NM_001164824, exon 3 of 3) 3' UTR (NM_001164824, exon 3 of 3) 6192 NM_001164824 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding chr13-266 chr13 35700934 35701144 + 20.5 0.000 Intergenic Intergenic 3312 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr5-918 chr5 125084068 125084278 + 20.5 0.000 intron (NR_109882, intron 2 of 5) intron (NR_109882, intron 2 of 5) 47342 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr10-551 chr10 86971050 86971260 + 20.5 0.000 TTS (NM_006829) TTS (NM_006829) 819 NM_133447 119385 Hs.511787 NM_133447 AGAP11 - ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 protein-coding chr22-718 chr22 29626570 29626780 + 20.5 0.000 intron (NM_181831, intron 1 of 14) intron (NM_181831, intron 1 of 14) 23042 NM_181831 4771 Hs.187898 NM_000268 ENSG00000186575 NF2 ACN|BANF|SCH neurofibromin 2 protein-coding chr2-976 chr2 44361673 44361883 + 20.5 0.000 promoter-TSS (NM_001171603) promoter-TSS (NM_001171603) 84 NM_001171617 9581 Hs.444349 NM_006036 ENSG00000138078 PREPL CMS22 prolyl endopeptidase like protein-coding chr11-612 chr11 118690099 118690309 + 20.5 0.000 Intergenic Intergenic -10554 NM_007180 11181 Hs.129712 NM_007180 ENSG00000118094 TREH TRE|TREA|TREHD trehalase protein-coding chr6-1045 chr6 2352065 2352275 + 20.5 0.000 intron (NR_046229, intron 4 of 6) intron (NR_046229, intron 4 of 6) 106417 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr9-838 chr9 133161146 133161356 + 20.5 0.000 intron (NM_001288572, intron 3 of 6) intron (NM_001288572, intron 3 of 6) 2663 NM_001282629 26301 Hs.495419 NM_021996 ENSG00000148288 GBGT1 A3GALNT|FS|UNQ2513 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) protein-coding chr1-1280 chr1 115364438 115364648 + 20.5 0.000 intron (NR_157569, intron 1 of 1) intron (NR_157569, intron 1 of 1) -26307 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr9-1381 chr9 76618814 76619024 + 20.5 0.000 intron (NM_001308051, intron 8 of 8) intron (NM_001308051, intron 8 of 8) 73496 NM_001308050 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr10-722 chr10 115093453 115093663 + 20.5 0.000 non-coding (NR_074088, exon 1 of 10) non-coding (NR_074088, exon 1 of 10) 193 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr16-595 chr16 8960070 8960280 + 20.5 0.000 intron (NM_003470, intron 1 of 30) intron (NM_003470, intron 1 of 30) 3731 NM_003470 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chr4-612 chr4 44678382 44678592 + 20.5 0.000 promoter-TSS (NM_021927) promoter-TSS (NM_021927) 67 NM_021927 60558 Hs.546419 NM_021927 ENSG00000151806 GUF1 EF-4|EF4|EIEE40 GUF1 homolog, GTPase protein-coding chr18-396 chr18 7394546 7394756 + 20.5 0.000 Intergenic Intergenic 66355 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr21-97 chr21 14864676 14864886 + 20.5 0.000 intron (NR_146322, intron 1 of 3) intron (NR_146322, intron 1 of 3) 53887 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr3-586 chr3 38334762 38334972 + 20.5 0.000 Intergenic Intergenic -11893 NM_001349179 9942 Hs.659985 NM_005108 ENSG00000093217 XYLB - xylulokinase protein-coding chr22-1029 chr22 33028082 33028292 + 20.5 0.000 intron (NM_003490, intron 1 of 13) intron (NM_003490, intron 1 of 13) -21366 NM_133633 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr12-1068 chr12 124906795 124907005 + 20.5 0.000 Intergenic Intergenic 7750 NM_021009 7316 Hs.520348 NM_021009 ENSG00000150991 UBC HMG20 ubiquitin C protein-coding chr1-1771 chr1 18890752 18890962 + 20.5 0.000 promoter-TSS (NM_001161504) promoter-TSS (NM_001161504) 34 NM_001161504 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chr10-815 chr10 90931232 90931442 + 20.5 0.000 Intergenic Intergenic -10062 NM_014391 27063 Hs.448589 NM_014391 ENSG00000148677 ANKRD1 ALRP|C-193|CARP|CVARP|MCARP|bA320F15.2 ankyrin repeat domain 1 protein-coding chr4-1034 chr4 26568814 26569024 + 20.5 0.000 Intergenic Intergenic -15005 NM_001292054 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr1-1404 chr1 228071841 228072051 + 20.5 0.000 Intergenic Intergenic 4604 NR_158166 100506571 NR_158166 LINC02809 - long intergenic non-protein coding RNA 2809 ncRNA chr6-646 chr6 7157769 7157979 + 20.5 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 49913 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr17-1230 chr17 64362986 64363196 + 20.5 0.000 intron (NM_000442, intron 6 of 15) intron (NM_000442, intron 6 of 15) 27769 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr10-887 chr10 91579715 91579925 + 20.5 0.000 intron (NR_024467, intron 1 of 4) intron (NR_024467, intron 1 of 4) 31640 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr4-289 chr4 80266499 80266709 + 20.5 0.000 promoter-TSS (NM_033143) promoter-TSS (NM_033143) 16 NM_004464 2250 Hs.37055 NM_004464 ENSG00000138675 FGF5 HBGF-5|Smag-82|TCMGLY fibroblast growth factor 5 protein-coding chr10-803 chr10 32983344 32983554 + 20.5 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -25219 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr8-274 chr8 100309884 100310094 + 20.5 0.000 promoter-TSS (NM_001353838) promoter-TSS (NM_001353838) -36 NM_183419 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr6-641 chr6 110096954 110097164 + 20.5 0.000 Intergenic Intergenic 82611 NM_003931 8936 Hs.75850 NM_003931 ENSG00000112290 WASF1 SCAR1|WAVE|WAVE1 WASP family member 1 protein-coding chr6-1088 chr6 57013437 57013647 + 20.5 0.000 intron (NM_152731, intron 3 of 6) MER77B|LTR|ERVL -32990 NM_001286275 57691 Hs.709521 NM_020931 ENSG00000168116 KIAA1586 - KIAA1586 protein-coding chr4-426 chr4 47836661 47836871 + 20.5 0.000 intron (NR_125881, intron 1 of 2) CpG 1301 NM_006587 10699 Hs.518618 NM_006587 ENSG00000145244 CORIN ATC2|CRN|Lrp4|PEE5|TMPRSS10 corin, serine peptidase protein-coding chr8-781 chr8 58234450 58234660 + 20.5 0.000 Intergenic L2a|LINE|L2 37546 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr11-2799 chr11 100849287 100849497 + 20.5 0.000 intron (NM_001367945, intron 5 of 25) intron (NM_001367945, intron 5 of 25) -84882 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr13-542 chr13 98207040 98207250 + 20.5 0.000 intron (NM_005766, intron 1 of 26) intron (NM_005766, intron 1 of 26) -1379 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr14-519 chr14 31242342 31242552 + 20.5 0.000 Intergenic MER41A|LTR|ERV1 -34654 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr10-785 chr10 68106733 68106943 + 20.5 0.000 intron (NR_045662, intron 2 of 19) intron (NR_045662, intron 2 of 19) 721 NM_001256267 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr8-975 chr8 116323836 116324046 + 20.5 0.000 intron (NR_046215, intron 1 of 13) L2|LINE|L2 1118 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr8-1062 chr8 48407810 48408020 + 20.5 0.000 Intergenic Intergenic -143652 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr2-2059 chr2 186042594 186042804 + 20.5 0.000 intron (NR_110218, intron 3 of 5) MSTC-int|LTR|ERVL-MaLR 43618 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr10-997 chr10 76112401 76112611 + 20.5 0.000 intron (NM_001305581, intron 5 of 6) CpG 329745 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr14-928 chr14 104983189 104983399 + 20.5 0.000 Intergenic Intergenic -2494 NM_174891 122616 Hs.27183 NM_174891 ENSG00000140104 CLBA1 C14orf79 clathrin binding box of aftiphilin containing 1 protein-coding chr19-937 chr19 35124468 35124678 + 20.5 0.000 TTS (NM_021910) TTS (NM_021910) 1873 NR_106947 102466205 NR_106947 ENSG00000284065 MIR6887 hsa-mir-6887 microRNA 6887 ncRNA chr9-598 chr9 113675482 113675692 + 20.5 0.000 Intergenic Intergenic 81458 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr2-2060 chr2 186695472 186695682 + 20.5 0.000 intron (NM_177454, intron 1 of 7) intron (NM_177454, intron 1 of 7) 1517 NM_177454 165215 Hs.28872 NM_177454 ENSG00000144369 FAM171B KIAA1946 family with sequence similarity 171 member B protein-coding chr11-874 chr11 45899849 45900059 + 20.5 0.000 intron (NM_005456, intron 2 of 11) CpG 7317 NM_001080446 143678 NM_001080446 ENSG00000234776 C11orf94 - chromosome 11 open reading frame 94 protein-coding chr11-896 chr11 19117575 19117785 + 20.5 0.000 intron (NM_001001483, intron 1 of 15) intron (NM_001001483, intron 1 of 15) 512 NM_019028 54503 Hs.188569 NM_019028 ENSG00000177054 ZDHHC13 HIP14L|HIP3RP zinc finger DHHC-type containing 13 protein-coding chr1-1649 chr1 223815780 223815990 + 20.5 0.000 intron (NM_001031685, intron 2 of 17) Tigger3a|DNA|TcMar-Tigger 30062 NM_001031685 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr10-230 chr10 71212516 71212726 + 20.5 0.000 promoter-TSS (NM_170744) promoter-TSS (NM_170744) 51 NM_170744 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr9-579 chr9 105007208 105007418 + 20.5 0.000 Intergenic Intergenic -79158 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr5-1004 chr5 84287914 84288124 + 20.5 0.000 intron (NM_001278642, intron 1 of 9) L2-1_AMi|LINE|L2 96848 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr17-1608 chr17 76204397 76204607 + 20.5 0.000 intron (NM_052916, intron 2 of 18) L2c|LINE|L2 35991 NM_052916 114804 Hs.500643 NM_052916 ENSG00000141576 RNF157 - ring finger protein 157 protein-coding chr6-505 chr6 149423733 149423943 + 20.5 0.000 Intergenic Intergenic 23576 NM_001002255 387082 Hs.657168 NM_001002255 ENSG00000177688 SUMO4 IDDM5|SMT3H4|SUMO-4|dJ281H8.4 small ubiquitin like modifier 4 protein-coding chr11-1480 chr11 119337561 119337771 + 20.5 0.000 TTS (NM_032015) TTS (NM_032015) 3139 NM_032015 79102 Hs.524084 NM_032015 ENSG00000173456 RNF26 - ring finger protein 26 protein-coding chr2-1510 chr2 36387504 36387714 + 20.5 0.000 intron (NM_016441, intron 1 of 16) L4_A_Mam|LINE|RTE-X 31831 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr12-1067 chr12 124747436 124747646 + 20.5 0.000 Intergenic Intergenic 92130 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr10-1048 chr10 68666214 68666424 + 20.5 0.000 intron (NM_030625, intron 6 of 11) intron (NM_030625, intron 6 of 11) -54920 NM_001282960 55749 Hs.49853 NM_018237 ENSG00000060339 CCAR1 - cell division cycle and apoptosis regulator 1 protein-coding chr20-439 chr20 2872487 2872697 + 20.5 0.000 promoter-TSS (NM_080840) promoter-TSS (NM_080840) -904 NM_080840 5786 Hs.269577 NM_002836 ENSG00000132670 PTPRA HEPTP|HLPR|HPTPA|HPTPalpha|LRP|PTPA|PTPRL2|R-PTP-alpha|RPTPA protein tyrosine phosphatase receptor type A protein-coding chr10-701 chr10 75359168 75359378 + 20.5 0.000 intron (NR_038225, intron 3 of 3) intron (NR_038225, intron 3 of 3) -42255 NR_024421 100131213 Hs.534598 NR_024421 ENSG00000237149 ZNF503-AS2 C10orf41|NCRNA00245 ZNF503 antisense RNA 2 ncRNA chr1-2571 chr1 29467467 29467677 + 20.5 0.000 Intergenic Intergenic -117458 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr9-1026 chr9 123333049 123333259 + 20.5 0.000 Intergenic MIRb|SINE|MIR -23043 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr14-349 chr14 75577794 75578004 + 20.5 0.000 promoter-TSS (NM_017791) promoter-TSS (NM_017791) -721 NM_017791 55640 Hs.509966 NM_017791 ENSG00000119686 FLVCR2 C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH|SLC49A2 feline leukemia virus subgroup C cellular receptor family member 2 protein-coding chr11-723 chr11 64166124 64166334 + 20.5 0.000 promoter-TSS (NM_014067) promoter-TSS (NM_014067) -116 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 mono-ADP ribosylhydrolase 1 protein-coding chr5-734 chr5 154779119 154779329 + 20.5 0.000 intron (NM_001367719, intron 1 of 18) intron (NM_001367719, intron 1 of 18) 22070 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr16-941 chr16 58409355 58409565 + 20.5 0.000 Intergenic Intergenic 16989 NM_001126129 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr12-724 chr12 16606358 16606568 + 20.5 0.000 promoter-TSS (NM_001243612) promoter-TSS (NM_001243612) -301 NM_018640 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding chr16-673 chr16 69820914 69821124 + 20.5 0.000 intron (NM_001270455, intron 4 of 8) intron (NM_001270455, intron 4 of 8) -17718 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr6-642 chr6 112298208 112298418 + 20.5 0.000 intron (NR_121193, intron 2 of 2) intron (NR_121193, intron 2 of 2) -43598 NM_001105208 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr20-355 chr20 49580398 49580608 + 20.5 0.000 Intergenic Intergenic -12366 NM_000961 5740 Hs.302085 NM_000961 ENSG00000124212 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 synthase protein-coding chr16-336 chr16 28925344 28925554 + 20.5 0.000 promoter-TSS (NM_024816) promoter-TSS (NM_024816) -211 NM_024816 79874 Hs.555978 NM_024816 ENSG00000177548 RABEP2 FRA rabaptin, RAB GTPase binding effector protein 2 protein-coding chr19-906 chr19 55113808 55114018 + 20.5 0.000 intron (NM_001271618, intron 1 of 21) intron (NM_001271618, intron 1 of 21) 3724 NM_017607 54776 Hs.631579 NM_017607 ENSG00000125503 PPP1R12C AAVS1|LENG3|MBS85|p84|p85 protein phosphatase 1 regulatory subunit 12C protein-coding chr11-956 chr11 57776358 57776568 + 20.5 0.000 intron (NM_001085467, intron 1 of 16) intron (NM_001085467, intron 1 of 16) 14661 NM_001206887 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr1-1493 chr1 220089788 220089998 + 20.5 0.000 promoter-TSS (NM_001286149) promoter-TSS (NM_001286149) -40 NM_001286151 10380 Hs.406134 NM_006085 ENSG00000162813 BPNT1 HEL20|PIP 3'(2'), 5'-bisphosphate nucleotidase 1 protein-coding chr7-950 chr7 111357048 111357258 + 20.5 0.000 intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) 205138 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr15-536 chr15 72758226 72758436 + 20.5 0.000 intron (NM_001365225, intron 4 of 6) intron (NM_001365225, intron 4 of 6) -24504 NR_040107 100287559 Hs.562587 NR_040107 ENSG00000260898 ADPGK-AS1 - ADPGK antisense RNA 1 ncRNA chr15-293 chr15 51759580 51759790 + 20.5 0.000 intron (NM_001142885, intron 1 of 8) intron (NM_001142885, intron 1 of 8) 8088 NM_001142885 29767 Hs.513734 NM_014548 ENSG00000128872 TMOD2 N-TMOD|NTMOD tropomodulin 2 protein-coding chr1-733 chr1 939950 940160 + 20.5 0.000 intron (NM_152486, intron 7 of 13) intron (NM_152486, intron 7 of 13) 14324 NM_152486 148398 Hs.335293 NM_152486 ENSG00000187634 SAMD11 MRS sterile alpha motif domain containing 11 protein-coding chr2-640 chr2 36376980 36377190 + 20.5 0.000 intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 21307 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr2-1276 chr2 75021704 75021914 + 20.5 0.000 Intergenic Intergenic 63166 NM_019896 56655 Hs.469060 NM_019896 ENSG00000115350 POLE4 YHHQ1|p12 DNA polymerase epsilon 4, accessory subunit protein-coding chr6-737 chr6 155678477 155678687 + 20.5 0.000 Intergenic Intergenic 163738 NR_134597 105378068 Hs.131541 NR_134596 LOC105378068 - uncharacterized LOC105378068 ncRNA chr15-603 chr15 60389364 60389574 + 20.5 0.000 intron (NM_004039, intron 1 of 12) intron (NM_004039, intron 1 of 12) 8517 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr3-1118 chr3 143071115 143071325 + 20.5 0.000 Intergenic Intergenic -48551 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr2-1286 chr2 149075977 149076187 + 20.5 0.000 intron (NM_001317006, intron 1 of 4) intron (NM_001317006, intron 1 of 4) -1440 NM_001317004 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr17-1525 chr17 69047427 69047637 + 20.5 0.000 intron (NM_080283, intron 3 of 38) LTR4|LTR|ERV1 13395 NM_080283 10350 Hs.131686 NM_080283 ENSG00000154258 ABCA9 EST640918 ATP binding cassette subfamily A member 9 protein-coding chr9-887 chr9 124142923 124143133 + 20.5 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -114578 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr7-1102 chr7 35875347 35875557 + 20.5 0.000 intron (NM_001363715, intron 6 of 13) intron (NM_001363715, intron 6 of 13) 74233 NM_001363715 989 Hs.191346 NM_001788 ENSG00000122545 SEPTIN7 CDC10|CDC3|NBLA02942|SEPT7|SEPT7A septin 7 protein-coding chr15-273 chr15 83112715 83112925 + 20.4 0.000 non-coding (NR_148561, exon 2 of 8) non-coding (NR_148561, exon 2 of 8) 5175 NM_001353878 53346 Hs.513094 NM_023003 ENSG00000136404 TM6SF1 - transmembrane 6 superfamily member 1 protein-coding chr12-974 chr12 29113302 29113512 + 20.4 0.000 Intergenic MER96B|DNA|hAT-Tip100 -35871 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr12-1045 chr12 80857422 80857632 + 20.4 0.000 intron (NR_136887, intron 1 of 5) intron (NR_136887, intron 1 of 5) -24898 NR_030348 693202 NR_030348 ENSG00000207763 MIR617 MIRN617|hsa-mir-617 microRNA 617 ncRNA chr16-1593 chr16 4677451 4677661 + 20.4 0.000 exon (NM_001142289, exon 11 of 16) exon (NM_001142289, exon 11 of 16) 6238 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr1-1563 chr1 8456373 8456583 + 20.4 0.000 intron (NM_001042681, intron 11 of 22) intron (NM_001042681, intron 11 of 22) 31833 NR_125999 102724552 Hs.568612 NR_125999 RERE-AS1 - RERE antisense RNA 1 ncRNA chr20-538 chr20 46400858 46401068 + 20.4 0.000 intron (NM_133171, intron 1 of 21) intron (NM_133171, intron 1 of 21) 5652 NM_133171 63916 Hs.210469 NM_022086 ENSG00000062598 ELMO2 CED-12|CED12|Ced-12A|ELMO-2|VMPI engulfment and cell motility 2 protein-coding chr17-667 chr17 80856525 80856735 + 20.4 0.000 intron (NM_020761, intron 12 of 33) intron (NM_020761, intron 12 of 33) -50998 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr12-577 chr12 98515354 98515564 + 20.4 0.000 promoter-TSS (NM_003276) promoter-TSS (NM_003276) -114 NM_001032283 7112 Hs.11355 NM_003276 ENSG00000120802 TMPO CMD1T|LAP2|LEMD4|PRO0868|TP thymopoietin protein-coding chr3-839 chr3 14211055 14211265 + 20.4 0.000 Intergenic Intergenic 32343 NM_014463 27258 Hs.111632 NM_014463 ENSG00000170860 LSM3 SMX4|USS2|YLR438C LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr11-1408 chr11 19890364 19890574 + 20.4 0.000 intron (NM_001244963, intron 6 of 39) intron (NM_001244963, intron 6 of 39) -130386 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr1-1381 chr1 93623955 93624165 + 20.4 0.000 intron (NM_001261409, intron 3 of 11) intron (NM_001261409, intron 3 of 11) -9963 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr4-512 chr4 119016650 119016860 + 20.4 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) -119029 NM_016599 51778 Hs.732122 NM_016599 ENSG00000172399 MYOZ2 C4orf5|CMH16|CS-1|FATZ-2 myozenin 2 protein-coding chr2-807 chr2 135985411 135985621 + 20.4 0.000 non-coding (NR_110200, exon 1 of 4) non-coding (NR_110200, exon 1 of 4) 110 NM_001349 1615 Hs.503787 NM_001349 ENSG00000115866 DARS HBSL|aspRS aspartyl-tRNA synthetase protein-coding chr9-865 chr9 70954236 70954446 + 20.4 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) -85289 NM_206944 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr9-840 chr9 134488563 134488773 + 20.4 0.000 Intergenic Intergenic 82108 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr19-1033 chr19 5578363 5578573 + 20.4 0.000 Intergenic Intergenic -10434 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr19-615 chr19 44025202 44025412 + 20.4 0.000 promoter-TSS (NM_001129996) promoter-TSS (NM_001129996) -35 NM_013360 7673 Hs.279840 NM_013360 ENSG00000159885 ZNF222 - zinc finger protein 222 protein-coding chr3-943 chr3 149783648 149783858 + 20.4 0.000 intron (NM_001144960, intron 2 of 5) intron (NM_001144960, intron 2 of 5) 8801 NM_001144960 389161 Hs.665988 NM_001144960 ENSG00000206199 ANKUB1 C3orf16 ankyrin repeat and ubiquitin domain containing 1 protein-coding chr16-815 chr16 66442090 66442300 + 20.4 0.000 intron (NM_001178020, intron 2 of 4) intron (NM_001178020, intron 2 of 4) 14900 NM_001197224 146227 Hs.97805 NM_001136106 ENSG00000166546 BEAN1 BEAN|SCA31 brain expressed associated with NEDD4 1 protein-coding chr11-996 chr11 1446926 1447136 + 20.4 0.000 intron (NM_003957, intron 12 of 19) intron (NM_003957, intron 12 of 19) 33855 NM_053005 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr1-1615 chr1 109548597 109548807 + 20.4 0.000 promoter-TSS (NM_006496) promoter-TSS (NM_006496) 87 NM_006496 2773 Hs.73799 NM_006496 ENSG00000065135 GNAI3 87U6|ARCND1 G protein subunit alpha i3 protein-coding chr16-933 chr16 29857355 29857565 + 20.4 0.000 TTS (NM_001286586) TTS (NM_001286586) 5766 NM_001286586 10423 Hs.121549 NM_006319 ENSG00000103502 CDIPT PIS|PIS1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase protein-coding chr9-864 chr9 69672816 69673026 + 20.4 0.000 promoter-TSS (NM_001163).2 promoter-TSS (NM_001163).2 -550 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr14-666 chr14 67618759 67618969 + 20.4 0.000 Intergenic Intergenic -1056 NM_001172 384 Hs.226007 NM_001172 ENSG00000081181 ARG2 - arginase 2 protein-coding chr7-1232 chr7 134891935 134892145 + 20.4 0.000 intron (NM_033139, intron 1 of 12) intron (NM_033139, intron 1 of 12) 582 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chrX-259 chrX 153981766 153981976 + 20.4 0.000 promoter-TSS (NR_036175) promoter-TSS (NR_036175) -695 NR_036175 100422877 NR_036175 ENSG00000283694 MIR3202-2 mir-3202-2 microRNA 3202-2 ncRNA chr10-1264 chr10 124646245 124646455 + 20.4 0.000 intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -57678 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr12-1204 chr12 120183211 120183421 + 20.4 0.000 intron (NM_006836, intron 5 of 57) L2a|LINE|L2 11399 NM_006836 10985 Hs.298716 NM_006836 ENSG00000089154 GCN1 GCN1L|GCN1L1|PRIC295 GCN1 activator of EIF2AK4 protein-coding chr13-342 chr13 43698806 43699016 + 20.4 0.000 intron (NM_001347969, intron 1 of 16) intron (NM_001347969, intron 1 of 16) -69434 NM_001127615 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr15-322 chr15 77266680 77266890 + 20.4 0.000 intron (NM_024776, intron 3 of 7) L1PB1|LINE|L1 -41381 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr13-289 chr13 51558093 51558303 + 20.4 0.000 Intergenic Intergenic 5609 NR_039852 100616423 NR_039852 ENSG00000266611 MIR4703 - microRNA 4703 ncRNA chr9-817 chr9 33211972 33212182 + 20.4 0.000 Intergenic Intergenic -28090 NM_014471 27290 Hs.555934 NM_014471 ENSG00000122711 SPINK4 HEL136|PEC-60|PEC60 serine peptidase inhibitor, Kazal type 4 protein-coding chr1-2088 chr1 78061923 78062133 + 20.4 0.000 intron (NM_017655, intron 1 of 5) intron (NM_017655, intron 1 of 5) 16062 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr1-1243 chr1 150972142 150972352 + 20.4 0.000 intron (NM_181746, intron 1 of 10) intron (NM_181746, intron 1 of 10) 2588 NM_022075 29956 Hs.744017 NM_013384 ENSG00000143418 CERS2 L3|LASS2|SP260|TMSG1 ceramide synthase 2 protein-coding chr1-887 chr1 44355178 44355388 + 20.4 0.000 promoter-TSS (NM_001301699) promoter-TSS (NM_001301699) -4 NM_001301701 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding chr1-1036 chr1 16122967 16123177 + 20.4 0.000 Intergenic L2c|LINE|L2 32997 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr2-573 chr2 230864682 230864892 + 20.4 0.000 promoter-TSS (NM_030926) promoter-TSS (NM_030926) -155 NM_001012514 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr1-956 chr1 93977587 93977797 + 20.4 0.000 Intergenic Intergenic -68094 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr6-840 chr6 157969175 157969385 + 20.4 0.000 Intergenic LTR49-int|LTR|ERV1 -12583 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr5-576 chr5 160399867 160400077 + 20.4 0.000 promoter-TSS (NM_022090) promoter-TSS (NM_022090) 82 NM_022090 63920 Hs.529464 NM_022090 ENSG00000221886 ZBED8 Buster3|C5orf54 zinc finger BED-type containing 8 protein-coding chr21-173 chr21 34553334 34553544 + 20.4 0.000 intron (NM_004414, intron 1 of 3) intron (NM_004414, intron 1 of 3) -26429 NM_001331016 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr19-754 chr19 2042373 2042583 + 20.4 0.000 exon (NM_017572, exon 10 of 14) exon (NM_017572, exon 10 of 14) 8766 NM_017572 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr1-1786 chr1 41123310 41123520 + 20.4 0.000 intron (NM_001172218, intron 7 of 15) intron (NM_001172218, intron 7 of 15) 38017 NM_001031694 22955 Hs.571874 NM_012236 ENSG00000010803 SCMH1 Scml3 Scm polycomb group protein homolog 1 protein-coding chr17-1184 chr17 58317480 58317690 + 20.4 0.000 intron (NM_024418, intron 13 of 30) intron (NM_024418, intron 13 of 30) -7865 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr6-1015 chr6 52918470 52918680 + 20.4 0.000 Intergenic HERV17-int|LTR|ERV1 -8877 NM_001363542 2940 Hs.102484 NM_000847 ENSG00000174156 GSTA3 GSTA3-3|GTA3 glutathione S-transferase alpha 3 protein-coding chr7-1119 chr7 140253009 140253219 + 20.4 0.000 Intergenic Intergenic 75853 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr9-688 chr9 76866789 76866999 + 20.4 0.000 intron (NM_001308048, intron 1 of 17) intron (NM_001308048, intron 1 of 17) 39193 NR_131751 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr6-732 chr6 147974400 147974610 + 20.4 0.000 Intergenic Intergenic -297823 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr3-868 chr3 155912793 155913003 + 20.4 0.000 intron (NM_003875, intron 7 of 15) HAL1|LINE|L1 42248 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr16-1504 chr16 19595490 19595700 + 20.4 0.000 intron (NM_001300743, intron 8 of 27) intron (NM_001300743, intron 8 of 27) 39892 NM_001365295 57020 Hs.654964 NM_020314 ENSG00000103544 VPS35L C16orf62 VPS35 endosomal protein sorting factor like protein-coding chr3-622 chr3 184135406 184135616 + 20.4 0.000 exon (NM_003907, exon 1 of 16) exon (NM_003907, exon 1 of 16) 153 NM_003907 8893 Hs.283551 NM_003907 ENSG00000145191 EIF2B5 CACH|CLE|EIF-2B|EIF2Bepsilon|LVWM eukaryotic translation initiation factor 2B subunit epsilon protein-coding chr16-872 chr16 29926266 29926476 + 20.4 0.000 promoter-TSS (NR_110933) promoter-TSS (NR_110933) -145 NM_178863 253980 Hs.534590 NM_178863 ENSG00000174943 KCTD13 BACURD1|FKSG86|PDIP1|POLDIP1|hBACURD1 potassium channel tetramerization domain containing 13 protein-coding chr15-629 chr15 67148312 67148522 + 20.4 0.000 intron (NM_001145103, intron 1 of 8) intron (NM_001145103, intron 1 of 8) 10396 NM_001145103 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr12-628 chr12 49507264 49507474 + 20.4 0.000 intron (NM_001293285, intron 10 of 14) intron (NM_001293285, intron 10 of 14) -31661 NM_001314030 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr12-321 chr12 32106709 32106919 + 20.4 0.000 promoter-TSS (NM_001714) promoter-TSS (NM_001714) 7 NM_001363603 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr22-526 chr22 19878798 19879008 + 20.4 0.000 intron (NR_147957, intron 13 of 16) intron (NR_147957, intron 13 of 16) -24029 NM_053004 54584 Hs.105642 NM_053004 ENSG00000185838 GNB1L DGCRK3|FKSG1|GY2|WDR14|WDVCF G protein subunit beta 1 like protein-coding chr15-230 chr15 41894838 41895048 + 20.4 0.000 promoter-TSS (NM_016642) promoter-TSS (NM_016642) -890 NM_016642 51332 Hs.709819 NM_016642 ENSG00000137877 SPTBN5 BSPECV|HUBSPECV|HUSPECV spectrin beta, non-erythrocytic 5 protein-coding chr7-1406 chr7 17652036 17652246 + 20.4 0.000 Intergenic Intergenic -93232 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr6-892 chr6 111591493 111591703 + 20.4 0.000 exon (NM_001164281, exon 2 of 9) exon (NM_001164281, exon 2 of 9) 14280 NM_147686 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr22-337 chr22 18528587 18528797 + 20.4 0.000 intron (NM_001242313, intron 2 of 8) CpG-18724 890 NM_001242313 728229 Hs.376511 NM_001242313 ENSG00000278558 TMEM191B - transmembrane protein 191B protein-coding chr18-265 chr18 9366318 9366528 + 20.4 0.000 intron (NM_020648, intron 3 of 4) intron (NM_020648, intron 3 of 4) 31650 NM_020648 57045 Hs.514685 NM_020648 ENSG00000128791 TWSG1 TSG twisted gastrulation BMP signaling modulator 1 protein-coding chr17-685 chr17 48817129 48817339 + 20.4 0.000 promoter-TSS (NM_001366314) promoter-TSS (NM_001366314) -5 NM_001130918 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr2-612 chr2 186849200 186849410 + 20.4 0.000 promoter-TSS (NM_182521) promoter-TSS (NM_182521) -135 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr6-828 chr6 140774282 140774492 + 20.4 0.000 Intergenic Intergenic 90573 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr19-636 chr19 5091306 5091516 + 20.4 0.000 intron (NM_001370094, intron 9 of 10) intron (NM_001370094, intron 9 of 10) 122298 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr17-574 chr17 75872853 75873063 + 20.4 0.000 Intergenic Intergenic 5623 NM_033452 91107 Hs.293660 NM_033452 ENSG00000132481 TRIM47 GOA|RNF100 tripartite motif containing 47 protein-coding chr22-469 chr22 42444048 42444258 + 20.4 0.000 Intergenic Intergenic -6167 NM_001371362 chr15-315 chr15 52569041 52569251 + 20.4 0.000 promoter-TSS (NM_001330309) promoter-TSS (NM_001330309) 75 NM_001306195 10776 Hs.512908 NM_006628 ENSG00000128989 ARPP19 ARPP-16|ARPP-19|ARPP16|ENSAL cAMP regulated phosphoprotein 19 protein-coding chr4-314 chr4 15469834 15470044 + 20.4 0.000 promoter-TSS (NM_001164720) promoter-TSS (NM_001164720) 57 NM_001164720 57545 Hs.590928 NM_020785 ENSG00000048342 CC2D2A JBTS9|MKS6 coiled-coil and C2 domain containing 2A protein-coding chr17-536 chr17 76498214 76498424 + 20.4 0.000 intron (NM_024599, intron 1 of 18) intron (NM_024599, intron 1 of 18) 3108 NM_024599 79651 Hs.464157 NM_024599 ENSG00000129667 RHBDF2 RHBDL5|RHBDL6|TEC|TOC|TOCG|iRhom2 rhomboid 5 homolog 2 protein-coding chrX-103 chrX 119468137 119468347 + 20.4 0.000 promoter-TSS (NM_001152) promoter-TSS (NM_001152) 20 NR_134915 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr1-627 chr1 31937658 31937868 + 20.4 0.000 promoter-TSS (NM_001369859) promoter-TSS (NM_001369859) 55 NM_001369858 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr20-298 chr20 33734034 33734244 + 20.4 0.000 intron (NM_001282933, intron 1 of 14) intron (NM_001282933, intron 1 of 14) 2143 NM_001282933 84905 Hs.516989 NM_032819 ENSG00000131061 ZNF341 HIES3 zinc finger protein 341 protein-coding chr7-712 chr7 76048422 76048632 + 20.4 0.000 promoter-TSS (NM_001317788) promoter-TSS (NM_001317788) 421 NM_001282404 4191 Hs.520967 NM_005918 ENSG00000146701 MDH2 EIEE51|M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2 protein-coding chr2-1980 chr2 28398521 28398731 + 20.4 0.000 intron (NM_005253, intron 1 of 3) intron (NM_005253, intron 1 of 3) -3954 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr11-908 chr11 66418216 66418426 + 20.4 0.000 Intergenic Intergenic -2683 NM_001318804 266743 Hs.256036 NM_178864 ENSG00000174576 NPAS4 Le-PAS|NXF|PASD10|bHLHe79 neuronal PAS domain protein 4 protein-coding chr3-927 chr3 55662792 55663002 + 20.4 0.000 intron (NR_132749, intron 16 of 17) intron (NR_132749, intron 16 of 17) -3428 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA chr2-840 chr2 217922722 217922932 + 20.4 0.000 intron (NM_022648, intron 1 of 32) intron (NM_022648, intron 1 of 32) -2591 NM_001308023 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr12-770 chr12 112198242 112198452 + 20.4 0.000 intron (NM_001109662, intron 55 of 75) intron (NM_001109662, intron 55 of 75) -35026 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chrX-254 chrX 154046523 154046733 + 20.4 0.000 intron (NM_001369393, intron 1 of 3) HAL1b|LINE|L1 -26639 NR_031757 100313781 NR_031757 ENSG00000284286 MIR718 hsa-mir-718 microRNA 718 ncRNA chr9-807 chr9 96137383 96137593 + 20.4 0.000 Intergenic Intergenic -21077 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr9-242 chr9 36401026 36401236 + 20.4 0.000 promoter-TSS (NM_022781) promoter-TSS (NM_022781) 67 NM_194330 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr5-833 chr5 37209023 37209233 + 20.4 0.000 intron (NM_023073, intron 16 of 51) CpG -39918 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chr15-453 chr15 98669027 98669237 + 20.4 0.000 intron (NM_000875, intron 1 of 20) intron (NM_000875, intron 1 of 20) -17911 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr5-396 chr5 76724929 76725139 + 20.4 0.000 intron (NM_001992, intron 1 of 1) intron (NM_001992, intron 1 of 1) 8908 NM_001992 2149 Hs.482562 NM_001992 ENSG00000181104 F2R CF2R|HTR|PAR-1|PAR1|TR coagulation factor II thrombin receptor protein-coding chr9-419 chr9 91847746 91847956 + 20.4 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 102377 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr6-768 chr6 16137255 16137465 + 20.4 0.000 intron (NM_013262, intron 2 of 6) intron (NM_013262, intron 2 of 6) -4196 NR_039782 100616269 NR_039782 ENSG00000263712 MIR4639 - microRNA 4639 ncRNA chr14-409 chr14 89549875 89550085 + 20.4 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) -26236 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA chr5-1054 chr5 125719929 125720139 + 20.4 0.000 Intergenic Intergenic 226773 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr4-312 chr4 6909461 6909671 + 20.4 0.000 promoter-TSS (NM_020773) promoter-TSS (NM_020773) 122 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr7-997 chr7 105439398 105439608 + 20.4 0.000 Intergenic HAL1ME|LINE|L1 -50113 NM_001350742 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr15-906 chr15 52523292 52523502 + 20.4 0.000 intron (NM_001142495, intron 1 of 39) intron (NM_001142495, intron 1 of 39) 5483 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr10-769 chr10 132520392 132520602 + 20.4 0.000 non-coding (NR_158224, exon 2 of 4) non-coding (NR_158224, exon 2 of 4) 16426 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr1-1777 chr1 26698163 26698373 + 20.4 0.000 intron (NM_139135, intron 1 of 19) intron (NM_139135, intron 1 of 19) 2253 NM_006015 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding chr9-833 chr9 125660053 125660263 + 20.4 0.000 intron (NM_001006621, intron 1 of 9) L2-3_Crp|LINE|L2 47050 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr6-495 chr6 43687651 43687861 + 20.4 0.000 promoter-TSS (NM_018135) promoter-TSS (NM_018135) 56 NM_001193343 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr17-544 chr17 75516251 75516461 + 20.4 0.000 promoter-TSS (NM_207346) promoter-TSS (NM_207346) -172 NM_207346 283989 Hs.378501 NM_207346 ENSG00000182173 TSEN54 PCH2A|PCH4|PCH5|SEN54L|sen54 tRNA splicing endonuclease subunit 54 protein-coding chr5-1034 chr5 154308736 154308946 + 20.4 0.000 intron (NM_198321, intron 3 of 11) L2a|LINE|L2 -38265 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr2-953 chr2 46500222 46500432 + 20.4 0.000 Intergenic Intergenic 20762 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding chr11-825 chr11 66744946 66745156 + 20.4 0.000 intron (NM_001302084, intron 1 of 14) CpG 282 NM_001302084 79703 Hs.292088 NM_024650 ENSG00000173715 C11orf80 HYDM4|TOP6BL|TOPOVIBL chromosome 11 open reading frame 80 protein-coding chr2-2231 chr2 188975779 188975989 + 20.4 0.000 intron (NM_000090, intron 1 of 50) intron (NM_000090, intron 1 of 50) 1511 NM_000090 1281 Hs.443625 NM_000090 ENSG00000168542 COL3A1 EDS4A|EDSVASC|PMGEDSV collagen type III alpha 1 chain protein-coding chr16-567 chr16 1705877 1706087 + 20.4 0.000 promoter-TSS (NM_001318852) promoter-TSS (NM_001318852) -201 NM_001318852 23162 Hs.207763 NM_015133 ENSG00000138834 MAPK8IP3 JIP-3|JIP3|JSAP1|NEDBA|SYD2|syd mitogen-activated protein kinase 8 interacting protein 3 protein-coding chr2-1177 chr2 25078520 25078730 + 20.4 0.000 intron (NM_001319099, intron 1 of 22) intron (NM_001319099, intron 1 of 22) 36162 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr7-1225 chr7 124992804 124993014 + 20.4 0.000 intron (NR_125719, intron 2 of 7) intron (NR_125719, intron 2 of 7) -62926 NR_003103 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr13-388 chr13 30792699 30792909 + 20.4 0.000 Intergenic Intergenic -10402 NR_047012 100874158 Hs.577982 NR_047012 ENSG00000237879 LINC00398 - long intergenic non-protein coding RNA 398 ncRNA chr4-614 chr4 57102128 57102338 + 20.4 0.000 intron (NM_001553, intron 1 of 4) UCON55|DNA|TcMar-Tigger -7529 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr1-873 chr1 228374906 228375116 + 20.4 0.000 intron (NM_001271223, intron 108 of 115) intron (NM_001271223, intron 108 of 115) 22098 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr11-987 chr11 103537247 103537457 + 20.4 0.000 Intergenic Intergenic -312554 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr12-504 chr12 52073966 52074176 + 20.4 0.000 intron (NM_001098673, intron 3 of 3) intron (NM_001098673, intron 3 of 3) 4093 NM_001098673 60673 Hs.9911 NM_021934 ENSG00000123395 ATG101 C12orf44 autophagy related 101 protein-coding chr17-1084 chr17 40442949 40443159 + 20.4 0.000 promoter-TSS (NM_001552) promoter-TSS (NM_001552) -396 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr9-797 chr9 4674679 4674889 + 20.4 0.000 Intergenic Intergenic 4696 NR_121597 101929351 Hs.745404 NR_121597 ENSG00000273061 CDC37L1-DT CDC37L1-AS1 CDC37L1 divergent transcript ncRNA chr3-752 chr3 184582732 184582942 + 20.4 0.000 TTS (NM_004443) TTS (NM_004443) 21052 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr11-491 chr11 3146920 3147130 + 20.4 0.000 intron (NM_145638, intron 1 of 20) intron (NM_145638, intron 1 of 20) 18285 NM_020896 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr6-976 chr6 116511628 116511838 + 20.4 0.000 promoter-TSS (NM_153711) promoter-TSS (NM_153711) 94 NM_153711 254228 Hs.105081 NM_153711 ENSG00000178033 CALHM5 C6orf188|FAM26E|dJ493F7.3 calcium homeostasis modulator family member 5 protein-coding chr1-662 chr1 41496283 41496493 + 20.4 0.000 Intergenic CpG -11705 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr15-552 chr15 42427634 42427844 + 20.4 0.000 intron (NM_001366844, intron 13 of 19) intron (NM_001366844, intron 13 of 19) 22960 NM_173089 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr2-941 chr2 231053005 231053215 + 20.4 0.000 Intergenic CpG -3754 NM_001191037 5707 Hs.3887 NM_002807 ENSG00000173692 PSMD1 P112|Rpn2|S1 proteasome 26S subunit, non-ATPase 1 protein-coding chr5-1430 chr5 10393645 10393855 + 20.4 0.000 intron (NM_001270660, intron 6 of 24) L2|LINE|L2 -8614 NR_162106 113218502 NR_162106 MIR10397 - microRNA 10397 ncRNA chr1-2061 chr1 11037716 11037926 + 20.4 0.000 intron (NM_006610, intron 6 of 10) intron (NM_006610, intron 6 of 10) 9418 NM_139208 10747 Hs.655645 NM_006610 ENSG00000009724 MASP2 MAP19|MASP-2|MASP1P1|sMAP mannan binding lectin serine peptidase 2 protein-coding chr1-1395 chr1 201489509 201489719 + 20.4 0.000 intron (NM_001193570, intron 3 of 5) MIRc|SINE|MIR 6959 NM_001193572 1465 Hs.108080 NM_004078 ENSG00000159176 CSRP1 CRP|CRP1|CSRP|CYRP|D1S181E|HEL-141|HEL-S-286 cysteine and glycine rich protein 1 protein-coding chr1-2460 chr1 63112290 63112500 + 20.4 0.000 Intergenic Intergenic -99924 NR_146606 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr20-425 chr20 4341823 4342033 + 20.4 0.000 Intergenic Intergenic -92641 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr9-959 chr9 91071665 91071875 + 20.4 0.000 intron (NR_033912, intron 1 of 3) intron (NR_033912, intron 1 of 3) 3362 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr6-912 chr6 151269440 151269650 + 20.4 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 29578 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr1-1791 chr1 64212183 64212393 + 20.4 0.000 intron (NM_001366232, intron 4 of 9) intron (NM_001366232, intron 4 of 9) 8665 NM_001366234 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding chr6-620 chr6 26123855 26124065 + 20.4 0.000 promoter-TSS (NM_003526) promoter-TSS (NM_003526) -56 NM_003526 8347 Hs.658713 NM_003526 ENSG00000180596 HIST1H2BC H2B.1|H2B/l|H2BFL|dJ221C16.3 histone cluster 1 H2B family member c protein-coding chr12-606 chr12 55847959 55848169 + 20.4 0.000 Intergenic Intergenic -5128 NM_002429 4327 Hs.591033 NM_002429 ENSG00000123342 MMP19 CODA|MMP18|RASI-1 matrix metallopeptidase 19 protein-coding chr9-844 chr9 135884347 135884557 + 20.4 0.000 intron (NM_015447, intron 1 of 16) intron (NM_015447, intron 1 of 16) 23094 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr4-1272 chr4 43456416 43456626 + 20.4 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 36022 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr22-461 chr22 19464247 19464457 + 20.4 0.000 intron (NM_001035247, intron 6 of 11) intron (NM_001035247, intron 6 of 11) 14841 NM_005659 7353 Hs.474213 NM_005659 ENSG00000070010 UFD1 UFD1L ubiquitin recognition factor in ER associated degradation 1 protein-coding chr17-436 chr17 7627685 7627895 + 20.4 0.000 promoter-TSS (NM_001289115) promoter-TSS (NM_001289115) 31 NM_001320847 112483 Hs.10846 NM_133491 ENSG00000141504 SAT2 SSAT2 spermidine/spermine N1-acetyltransferase family member 2 protein-coding chr7-332 chr7 2519678 2519888 + 20.4 0.000 promoter-TSS (NM_001040167) promoter-TSS (NM_001040167) 9 NM_001040168 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr11-701 chr11 65275222 65275432 + 20.4 0.000 intron (NM_002689, intron 4 of 17) intron (NM_002689, intron 4 of 17) 13365 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr11-1332 chr11 129861815 129862025 + 20.4 0.000 Intergenic Intergenic 31089 NM_006165 4798 Hs.530539 NM_006165 ENSG00000170322 NFRKB INO80G nuclear factor related to kappaB binding protein protein-coding chr6-669 chr6 107495134 107495344 + 20.4 0.000 intron (NM_018013, intron 1 of 6) intron (NM_018013, intron 1 of 6) 5122 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr10-675 chr10 101938228 101938438 + 20.3 0.000 intron (NM_024541, intron 23 of 25) intron (NM_024541, intron 23 of 25) -94413 NM_173192 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr5-737 chr5 157761905 157762115 + 20.3 0.000 Intergenic Intergenic 18298 NM_173491 134353 Hs.23648 NM_173491 ENSG00000155858 LSM11 - LSM11, U7 small nuclear RNA associated protein-coding chr22-522 chr22 41941142 41941352 + 20.3 0.000 intron (NM_001002876, intron 4 of 4) MIRc|SINE|MIR -1028 NM_001110215 79019 Hs.208912 NM_024053 ENSG00000100162 CENPM C22orf18|CENP-M|PANE1 centromere protein M protein-coding chr16-805 chr16 25111506 25111716 + 20.3 0.000 promoter-TSS (NR_120306) promoter-TSS (NR_120306) -56 NR_120306 102723510 Hs.569596 NR_120306 LCMT1-AS1 - LCMT1 antisense RNA 1 ncRNA chr3-1477 chr3 74630696 74630906 + 20.3 0.000 Intergenic Intergenic -109661 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr10-1003 chr10 95229739 95229949 + 20.3 0.000 TTS (NM_207321) TTS (NM_207321) 35644 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr3-1509 chr3 140245048 140245258 + 20.3 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 263636 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr17-1756 chr17 16255657 16255867 + 20.3 0.000 intron (NM_004278, intron 2 of 6) intron (NM_004278, intron 2 of 6) -26252 NR_031698 100302124 NR_031698 ENSG00000221355 MIR1288 MIRN1288|hsa-mir-1288 microRNA 1288 ncRNA chr3-437 chr3 10248436 10248646 + 20.3 0.000 promoter-TSS (NM_014760) promoter-TSS (NM_014760) 82 NM_014760 9797 Hs.475401 NM_014760 ENSG00000157014 TATDN2 - TatD DNase domain containing 2 protein-coding chr15-352 chr15 39920136 39920346 + 20.3 0.000 5' UTR (NM_007223, exon 1 of 3) 5' UTR (NM_007223, exon 1 of 3) 651 NM_007223 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr17-805 chr17 80260914 80261124 + 20.3 0.000 intron (NM_020954, intron 1 of 16) CpG 167 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr1-408 chr1 19485756 19485966 + 20.3 0.000 promoter-TSS (NM_001206541) promoter-TSS (NM_001206541) -322 NM_001206540 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr11-1389 chr11 408934 409144 + 20.3 0.000 intron (NM_001135054, intron 2 of 9) intron (NM_001135054, intron 2 of 9) 5960 NM_001135054 59307 Hs.501624 NM_021805 ENSG00000185187 SIGIRR IL-1R8|TIR8 single Ig and TIR domain containing protein-coding chr18-319 chr18 79398051 79398261 + 20.3 0.000 intron (NM_172388, intron 1 of 8) CpG-12705 -2118 NM_001278673 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chrX-183 chrX 85003807 85004017 + 20.3 0.000 promoter-TSS (NM_198450) promoter-TSS (NM_198450) 35 NM_198450 139322 Hs.512181 NM_198450 ENSG00000155008 APOOL CXorf33|FAM121A|MICOS27|Mic27|UNQ8193 apolipoprotein O like protein-coding chr5-853 chr5 107939383 107939593 + 20.3 0.000 intron (NM_001163315, intron 7 of 8) intron (NM_001163315, intron 7 of 8) -268551 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr5-494 chr5 126600899 126601109 + 20.3 0.000 promoter-TSS (NM_032177) promoter-TSS (NM_032177) 57 NM_032177 51808 Hs.555731 NM_032177 ENSG00000164902 PHAX RNUXA phosphorylated adaptor for RNA export protein-coding chr1-2220 chr1 150484983 150485193 + 20.3 0.000 Intergenic Intergenic -2331 NR_073513 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr10-800 chr10 12707630 12707840 + 20.3 0.000 intron (NM_001351032, intron 5 of 11) intron (NM_001351032, intron 5 of 11) 17618 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr3-526 chr3 170448660 170448870 + 20.3 0.000 Intergenic Intergenic -18520 NR_135556 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr17-546 chr17 75784526 75784736 + 20.3 0.000 promoter-TSS (NR_039892) promoter-TSS (NR_039892) -24 NR_039892 100616282 NR_039892 ENSG00000283853 MIR4738 - microRNA 4738 ncRNA chr6-580 chr6 113995756 113995966 + 20.3 0.000 non-coding (NR_125845, exon 4 of 10) non-coding (NR_125845, exon 4 of 10) -24713 NM_001527 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr10-1150 chr10 99694221 99694431 + 20.3 0.000 TTS (NM_001320974) TTS (NM_001320974) 34697 NM_001349963 57089 Hs.28326 NM_020354 ENSG00000198018 ENTPD7 LALP1 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding chr9-1951 chr9 36166700 36166910 + 20.3 0.000 Intergenic CpG -2583 NM_005893 881 Hs.115460 NM_005893 ENSG00000185972 CCIN BTBD20|KBTBD14 calicin protein-coding chr7-691 chr7 16668028 16668238 + 20.3 0.000 intron (NM_001362717, intron 2 of 11) intron (NM_001362717, intron 2 of 11) 6919 NM_001362719 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr3-1094 chr3 12841574 12841784 + 20.3 0.000 promoter-TSS (NM_000994) promoter-TSS (NM_000994) -97 NM_001007073 6161 Hs.265174 NM_000994 ENSG00000144713 RPL32 L32|PP9932 ribosomal protein L32 protein-coding chr8-407 chr8 52713345 52713555 + 20.3 0.000 intron (NM_001083617, intron 1 of 23) CpG 985 NM_014781 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr3-704 chr3 109685332 109685542 + 20.3 0.000 Intergenic LTR25|LTR|ERV1 82609 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr8-560 chr8 68627347 68627557 + 20.3 0.000 intron (NR_146186, intron 7 of 12) intron (NR_146186, intron 7 of 12) -295961 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr7-1589 chr7 106425240 106425450 + 20.3 0.000 Intergenic Intergenic -140362 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr5-882 chr5 73419576 73419786 + 20.3 0.000 Intergenic CpG 29096 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr19-1001 chr19 49333749 49333959 + 20.3 0.000 Intergenic Intergenic -1552 NM_001040031 951 Hs.166556 NM_001774 ENSG00000104894 CD37 GP52-40|TSPAN26 CD37 molecule protein-coding chr3-1292 chr3 123635231 123635441 + 20.3 0.000 intron (NM_001321309, intron 28 of 32) intron (NM_001321309, intron 28 of 32) -14788 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr1-2020 chr1 115251876 115252086 + 20.3 0.000 Intergenic LTR79|LTR|ERVL -31053 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr2-1919 chr2 187430044 187430254 + 20.3 0.000 intron (NM_005795, intron 1 of 14) intron (NM_005795, intron 1 of 14) 18103 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr10-1261 chr10 124033482 124033692 + 20.3 0.000 intron (NM_014863, intron 5 of 5) MLT1F2|LTR|ERVL-MaLR 58819 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr14-227 chr14 100285482 100285692 + 20.3 0.000 Intergenic CpG 8230 NR_106822 102466730 NR_106822 ENSG00000283840 MIR6764 hsa-mir-6764 microRNA 6764 ncRNA chr17-728 chr17 34981060 34981270 + 20.3 0.000 intron (NM_013975, intron 1 of 19) CpG 653 NM_013975 3980 Hs.100299 NM_002311 ENSG00000005156 LIG3 LIG2|LIG3alpha DNA ligase 3 protein-coding chr16-822 chr16 74296803 74297013 + 20.3 0.000 promoter-TSS (NM_002811) promoter-TSS (NM_002811) 94 NM_002811 5713 Hs.440604 NM_002811 ENSG00000103035 PSMD7 MOV34|P40|Rpn8|S12 proteasome 26S subunit, non-ATPase 7 protein-coding chr1-2285 chr1 8510750 8510960 + 20.3 0.000 intron (NM_001042681, intron 7 of 22) intron (NM_001042681, intron 7 of 22) -15942 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr1-1781 chr1 34067033 34067243 + 20.3 0.000 intron (NM_052896, intron 2 of 69) intron (NM_052896, intron 2 of 69) 98136 NM_001281956 114784 Hs.656915 NM_052896 ENSG00000121904 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding chr17-1022 chr17 42194333 42194543 + 20.3 0.000 promoter-TSS (NM_001142623) promoter-TSS (NM_001142623) 56 NM_001142623 84514 Hs.38039 NM_032484 ENSG00000167925 GHDC D11LGP1|LGP1 GH3 domain containing protein-coding chr6-1373 chr6 79076910 79077120 + 20.3 0.000 intron (NM_017934, intron 4 of 39) intron (NM_017934, intron 4 of 39) 1239 NM_017934 55023 Hs.511817 NM_017934 ENSG00000146247 PHIP BRWD2|DCAF14|DIDOD|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding chr15-894 chr15 101091467 101091677 + 20.3 0.000 Intergenic Intergenic 160476 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr16-852 chr16 67719893 67720103 + 20.3 0.000 promoter-TSS (NM_030819) promoter-TSS (NM_030819) -682 NM_001243650 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr3-1102 chr3 47318849 47319059 + 20.3 0.000 intron (NM_025010, intron 1 of 9) intron (NM_025010, intron 1 of 9) 36010 NM_025010 23276 Hs.517946 NM_025010 ENSG00000114648 KLHL18 - kelch like family member 18 protein-coding chr13-435 chr13 98384806 98385016 + 20.3 0.000 intron (NM_005766, intron 7 of 26) intron (NM_005766, intron 7 of 26) 137214 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr1-746 chr1 101025874 101026084 + 20.3 0.000 promoter-TSS (NM_001077395) promoter-TSS (NM_001077395) 133 NR_109849 102606465 Hs.593669 NR_109849 LOC102606465 - uncharacterized LOC102606465 ncRNA chr17-1100 chr17 73228760 73228970 + 20.3 0.000 intron (NM_001098832, intron 1 of 3) intron (NM_001098832, intron 1 of 3) -1148 NM_001289412 84923 Hs.741276 NM_032837 ENSG00000133193 FAM104A - family with sequence similarity 104 member A protein-coding chr9-335 chr9 86282555 86282765 + 20.3 0.000 promoter-TSS (NM_030940) promoter-TSS (NM_030940) -122 NM_030940 81689 Hs.449291 NM_030940 ENSG00000135070 ISCA1 HBLD2|ISA1|MMDS5|hIscA iron-sulfur cluster assembly 1 protein-coding chr6-1296 chr6 161011714 161011924 + 20.3 0.000 intron (NM_005922, intron 1 of 26) intron (NM_005922, intron 1 of 26) 20050 NM_005922 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr4-531 chr4 154550467 154550677 + 20.3 0.000 promoter-TSS (NM_001201564) promoter-TSS (NM_001201564) -139 NM_001201564 5356 Hs.249996 NM_002669 ENSG00000171566 PLRG1 Cwc1|PRL1|PRP46|PRPF46|TANGO4 pleiotropic regulator 1 protein-coding chr10-889 chr10 99788785 99788995 + 20.3 0.000 intron (NM_000392, intron 2 of 31) intron (NM_000392, intron 2 of 31) 6250 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr3-806 chr3 16427451 16427661 + 20.3 0.000 intron (NM_015150, intron 3 of 9) intron (NM_015150, intron 3 of 9) 86143 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr8-349 chr8 42140721 42140931 + 20.3 0.000 Intergenic CpG -12120 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr1-1176 chr1 212701115 212701325 + 20.3 0.000 Intergenic Intergenic -1380 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr7-1028 chr7 43482225 43482435 + 20.3 0.000 intron (NM_001287059, intron 15 of 27) intron (NM_001287059, intron 15 of 27) 40212 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr8-227 chr8 100150530 100150740 + 20.3 0.000 promoter-TSS (NM_005034) promoter-TSS (NM_005034) -1 NM_005034 5440 Hs.351475 NM_005034 ENSG00000147669 POLR2K ABC10-alpha|RPABC4|RPB10alpha|RPB12|RPB7.0|hRPB7.0|hsRPB10a RNA polymerase II subunit K protein-coding chr12-1049 chr12 95169452 95169662 + 20.3 0.000 intron (NM_018351, intron 3 of 20) Plat_L3|LINE|CR1 47910 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding chr14-415 chr14 55411643 55411853 + 20.3 0.000 exon (NM_014924, exon 1 of 10) exon (NM_014924, exon 1 of 10) 110 NM_014924 22863 Hs.414809 NM_014924 ENSG00000126775 ATG14 ATG14L|BARKOR|KIAA0831 autophagy related 14 protein-coding chr12-1132 chr12 76942924 76943134 + 20.3 0.000 Intergenic Intergenic -64010 NM_001321 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr3-1060 chr3 31968945 31969155 + 20.3 0.000 intron (NM_001174060, intron 1 of 10) intron (NM_001174060, intron 1 of 10) -12700 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr9-1097 chr9 130240657 130240867 + 20.3 0.000 promoter-TSS (NR_162140) promoter-TSS (NR_162140) -625 NR_162140 113219459 NR_162140 MIR12126 - microRNA 12126 ncRNA chr4-988 chr4 127634213 127634423 + 20.3 0.000 intron (NM_015693, intron 1 of 15) intron (NM_015693, intron 1 of 15) 1361 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr21-74 chr21 44300614 44300824 + 20.3 0.000 intron (NM_002626, intron 1 of 21) intron (NM_002626, intron 1 of 21) 666 NM_002626 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr1-1234 chr1 61725188 61725398 + 20.3 0.000 promoter-TSS (NM_032027) promoter-TSS (NM_032027) 130 NR_135161 83941 Hs.656790 NM_032027 ENSG00000162604 TM2D1 BBP TM2 domain containing 1 protein-coding chr19-607 chr19 11529081 11529291 + 20.3 0.000 promoter-TSS (NM_016581) promoter-TSS (NM_016581) -52 NM_001142465 51295 Hs.515146 NM_016581 ENSG00000130159 ECSIT SITPEC ECSIT signalling integrator protein-coding chr19-1132 chr19 5580122 5580332 + 20.3 0.000 Intergenic Intergenic -12193 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr3-1740 chr3 144295438 144295648 + 20.3 0.000 Intergenic L4_C_Mam|LINE|RTE-X 322462 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr2-2039 chr2 132424585 132424795 + 20.3 0.000 intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 7885 NM_001508 2863 Hs.432395 NM_001508 ENSG00000183840 GPR39 - G protein-coupled receptor 39 protein-coding chr5-328 chr5 43515010 43515220 + 20.3 0.000 promoter-TSS (NM_198566) promoter-TSS (NM_198566) 33 NM_198566 375444 Hs.661641 NM_198566 ENSG00000172244 C5orf34 - chromosome 5 open reading frame 34 protein-coding chr2-1038 chr2 62760662 62760872 + 20.3 0.000 intron (NM_001142615, intron 3 of 22) MIR3|SINE|MIR 53870 NM_001354217 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr4-472 chr4 169363351 169363561 + 20.3 0.000 Intergenic MLT1E3-int|LTR|ERVL-MaLR -92500 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr6-479 chr6 71181641 71181851 + 20.3 0.000 Intergenic L2c|LINE|L2 -107065 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr13-977 chr13 31896619 31896829 + 20.3 0.000 intron (NR_027062, intron 1 of 3) intron (NR_027062, intron 1 of 3) 49941 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr5-827 chr5 16894548 16894758 + 20.3 0.000 intron (NM_012334, intron 1 of 40) intron (NM_012334, intron 1 of 40) 41635 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr19-1026 chr19 610724 610934 + 20.3 0.000 intron (NM_001194, intron 5 of 7) MLT1C|LTR|ERVL-MaLR 20948 NM_001194 610 Hs.124161 NM_001194 ENSG00000099822 HCN2 BCNG-2|BCNG2|HAC-1 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 protein-coding chr3-675 chr3 120349196 120349406 + 20.3 0.000 promoter-TSS (NM_001099678) promoter-TSS (NM_001099678) 53 NM_001099678 116064 Hs.518084 NM_001099678 ENSG00000163428 LRRC58 - leucine rich repeat containing 58 protein-coding chr19-941 chr19 45507421 45507631 + 20.3 0.000 promoter-TSS (NM_003370) promoter-TSS (NM_003370) 47 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr13-309 chr13 113495761 113495971 + 20.3 0.000 exon (NM_017905, exon 2 of 13) exon (NM_017905, exon 2 of 13) 4845 NM_017905 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr19-936 chr19 18678156 18678366 + 20.3 0.000 Intergenic Intergenic -5419 NM_001098482 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr2-1260 chr2 32360443 32360653 + 20.3 0.000 intron (NM_016252, intron 1 of 73) intron (NM_016252, intron 1 of 73) 3520 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr11-739 chr11 47426634 47426844 + 20.3 0.000 promoter-TSS (NM_002804) promoter-TSS (NM_002804) -266 NM_002804 5702 Hs.250758 NM_002804 ENSG00000165916 PSMC3 TBP1 proteasome 26S subunit, ATPase 3 protein-coding chr1-3403 chr1 226708500 226708710 + 20.3 0.000 intron (NM_002221, intron 2 of 7) MLT1L|LTR|ERVL-MaLR 30570 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr11-419 chr11 67469283 67469493 + 20.3 0.000 promoter-TSS (NM_001078651) promoter-TSS (NM_001078651) -137 NM_001078650 80194 Hs.288761 NM_025124 ENSG00000172663 TMEM134 - transmembrane protein 134 protein-coding chr9-1727 chr9 123176215 123176425 + 20.3 0.000 intron (NM_001171137, intron 4 of 18) intron (NM_001171137, intron 4 of 18) -60843 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chr6-347 chr6 149750243 149750453 + 20.3 0.000 intron (NM_001252051, intron 1 of 6) intron (NM_001252051, intron 1 of 6) 607 NM_001360452 5110 Hs.279257 NM_005389 ENSG00000120265 PCMT1 PIMT protein-L-isoaspartate (D-aspartate) O-methyltransferase protein-coding chr1-2508 chr1 203807307 203807517 + 20.3 0.000 intron (NM_014827, intron 4 of 19) AluJr|SINE|Alu 9889 NM_001174108 100381270 NM_001174108 ENSG00000257315 ZBED6 MGR zinc finger BED-type containing 6 protein-coding chr7-1969 chr7 129307973 129308183 + 20.3 0.000 intron (NM_001130720, intron 1 of 16) L1MA2|LINE|L1 -60302 NM_001130723 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr9-616 chr9 37784929 37785139 + 20.3 0.000 promoter-TSS (NM_016042) promoter-TSS (NM_016042) 30 NM_016042 51010 Hs.602571 NM_016042 ENSG00000107371 EXOSC3 CGI-102|PCH1B|RRP40|Rrp40p|bA3J10.7|hRrp-40|p10 exosome component 3 protein-coding chr13-403 chr13 99043999 99044209 + 20.3 0.000 intron (NM_015296, intron 1 of 55) hAT-N1_Mam|DNA|hAT-Tip100? -28319 NM_001366677 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr16-1274 chr16 66502604 66502814 + 20.3 0.000 Intergenic L2b|LINE|L2 -26307 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr3-1169 chr3 139745937 139746147 + 20.3 0.000 Intergenic Intergenic -67992 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr12-462 chr12 95003515 95003725 + 20.3 0.000 promoter-TSS (NM_001258338) promoter-TSS (NM_001258338) 77 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13|MC1DN23 NADH:ubiquinone oxidoreductase subunit A12 protein-coding chr12-1044 chr12 79836684 79836894 + 20.3 0.000 intron (NM_001244990, intron 4 of 24) MIR3|SINE|MIR 77122 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr19-973 chr19 524407 524617 + 20.3 0.000 Intergenic Intergenic -7248 NM_004359 997 Hs.514997 NM_004359 ENSG00000099804 CDC34 E2-CDC34|UBC3|UBCH3|UBE2R1 cell division cycle 34 protein-coding chr19-916 chr19 48271640 48271850 + 20.3 0.000 5' UTR (NM_153608, exon 3 of 6) 5' UTR (NM_153608, exon 3 of 6) 458 NM_001369812 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr8-369 chr8 142669960 142670170 + 20.3 0.000 promoter-TSS (NM_003724) promoter-TSS (NM_003724) -71 NM_003724 8629 Hs.535903 NM_003724 ENSG00000234616 JRK JH8|jerky Jrk helix-turn-helix protein protein-coding chr19-690 chr19 16180712 16180922 + 20.3 0.000 Intergenic Kanga1b|DNA|TcMar-Tc2 -4593 NM_014077 26017 Hs.631614 NM_014077 ENSG00000105058 FAM32A OTAG-12|OTAG12 family with sequence similarity 32 member A protein-coding chr1-1034 chr1 11919016 11919226 + 20.3 0.000 TTS (NM_138346) TTS (NM_138346) 7306 NM_138346 90231 Hs.520094 NM_138346 ENSG00000116685 KIAA2013 - KIAA2013 protein-coding chr16-538 chr16 81007020 81007230 + 20.3 0.000 promoter-TSS (NM_001351968) promoter-TSS (NM_001351968) -206 NR_147838 56942 Hs.55028 NM_020188 ENSG00000103121 CMC2 2310061C15Rik|C16orf61|DC13 C-X9-C motif containing 2 protein-coding chr20-426 chr20 5205459 5205669 + 20.3 0.000 Intergenic Intergenic 78556 NM_003818 8760 Hs.126857 NM_003818 ENSG00000101290 CDS2 - CDP-diacylglycerol synthase 2 protein-coding chr2-1166 chr2 204842643 204842853 + 20.3 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 297273 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr5-648 chr5 145587792 145588002 + 20.3 0.000 Intergenic Intergenic 247445 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr13-336 chr13 36369287 36369497 + 20.3 0.000 intron (NR_045181, intron 4 of 4) intron (NR_045181, intron 4 of 4) 788 NM_001142294 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding chr21-164 chr21 34227545 34227755 + 20.3 0.000 Intergenic Intergenic 46973 NR_027266 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA chr1-465 chr1 100037999 100038209 + 20.3 0.000 promoter-TSS (NM_033055) promoter-TSS (NM_033055) 9 NM_033055 64645 Hs.124156 NM_033055 ENSG00000156875 MFSD14A HIAT1 major facilitator superfamily domain containing 14A protein-coding chrX-81 chrX 44872877 44873087 + 20.3 0.000 promoter-TSS (NM_021140) promoter-TSS (NM_021140) -193 NM_001291418 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding chr20-227 chr20 50731084 50731294 + 20.3 0.000 promoter-TSS (NM_032521) promoter-TSS (NM_032521) -391 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chrX-334 chrX 119686153 119686363 + 20.3 0.000 intron (NM_145799, intron 1 of 10) intron (NM_145799, intron 1 of 10) 6910 NM_145802 23157 Hs.496666 NM_015129 ENSG00000125354 SEPTIN6 SEP2|SEPT2|SEPT6 septin 6 protein-coding chr5-2041 chr5 96629882 96630092 + 20.3 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -32050 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr4-1300 chr4 108849712 108849922 + 20.3 0.000 intron (NM_198721, intron 25 of 36) intron (NM_198721, intron 25 of 36) -86764 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr1-1112 chr1 2270777 2270987 + 20.3 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 42563 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr11-977 chr11 67032917 67033127 + 20.3 0.000 intron (NM_001318773, intron 3 of 8) intron (NM_001318773, intron 3 of 8) 9888 NM_177963 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr11-881 chr11 72025184 72025394 + 20.3 0.000 intron (NR_104476, intron 4 of 24) intron (NR_104476, intron 4 of 24) 10998 NR_104178 100128494 Hs.713607 NR_104178 ENSG00000251143 LOC100128494 - uncharacterized LOC100128494 ncRNA chr16-352 chr16 28211894 28212104 + 20.3 0.000 promoter-TSS (NM_015171) promoter-TSS (NM_015171) -34 NM_015171 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr9-693 chr9 130129319 130129529 + 20.3 0.000 3' UTR (NM_001287346, exon 17 of 17) 3' UTR (NM_001287346, exon 17 of 17) 14795 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr6-730 chr6 144954094 144954304 + 20.3 0.000 Intergenic Intergenic 548544 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr8-179 chr8 73878837 73879047 + 20.3 0.000 promoter-TSS (NM_001271015) promoter-TSS (NM_001271015) -40 NR_147034 101926947 Hs.521636 NR_147034 LINC01617 C8orf23|NCRNA00249|XLOC_006844 long intergenic non-protein coding RNA 1617 ncRNA chr17-1612 chr17 77507026 77507236 + 20.3 0.000 Intergenic Intergenic -19870 NR_148967 400622 Hs.514516 NR_148967 LOC400622 - uncharacterized LOC400622 ncRNA chr17-1138 chr17 75783275 75783485 + 20.3 0.000 Intergenic Intergenic 1227 NR_039892 100616282 NR_039892 ENSG00000283853 MIR4738 - microRNA 4738 ncRNA chr12-1382 chr12 80262471 80262681 + 20.3 0.000 intron (NM_001368062, intron 24 of 62) intron (NM_001368062, intron 24 of 62) 53123 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr19-1208 chr19 2103351 2103561 + 20.3 0.000 intron (NM_003938, intron 29 of 29) intron (NM_003938, intron 29 of 29) 6541 NM_001031735 113177 Hs.424049 NM_052878 ENSG00000099840 IZUMO4 C19orf36|IMAGE:4215339 IZUMO family member 4 protein-coding chr18-90 chr18 46173931 46174141 + 20.3 0.000 promoter-TSS (NM_145055) promoter-TSS (NM_145055) 2 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr12-833 chr12 58803926 58804136 + 20.3 0.000 intron (NR_126341, intron 1 of 1) intron (NR_126341, intron 1 of 1) -22315 NR_120452 101927653 Hs.130744 NR_120452 ENSG00000257259 LINC02388 - long intergenic non-protein coding RNA 2388 ncRNA chr11-950 chr11 33258224 33258434 + 20.3 0.000 promoter-TSS (NM_001278162) promoter-TSS (NM_001278162) -2 NM_001278162 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr2-1247 chr2 218343618 218343828 + 20.3 0.000 intron (NM_022572, intron 7 of 8) intron (NM_022572, intron 7 of 8) 1812 NR_106868 102466197 NR_106868 ENSG00000278524 MIR6810 hsa-mir-6810 microRNA 6810 ncRNA chr6-1323 chr6 16352422 16352632 + 20.3 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 113940 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr19-1144 chr19 40147591 40147801 + 20.3 0.000 Intergenic Intergenic -43730 NM_002446 4294 Hs.466743 NM_002446 ENSG00000130758 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding chr5-535 chr5 73448663 73448873 + 20.3 0.000 promoter-TSS (NM_004472) promoter-TSS (NM_004472) 9 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chrX-136 chrX 48957889 48958099 + 20.3 0.000 promoter-TSS (NM_001136158) promoter-TSS (NM_001136158) -363 NM_001136158 55593 Hs.496098 NM_017602 ENSG00000068308 OTUD5 DUBA OTU deubiquitinase 5 protein-coding chr6-704 chr6 44126650 44126860 + 20.3 0.000 promoter-TSS (NM_018426) promoter-TSS (NM_018426) -81 NM_001318769 64928 Hs.311190 NM_032111 ENSG00000180992 MRPL14 L14mt|L32mt|MRP-L14|MRP-L32|MRPL32|RMPL32|RPML32 mitochondrial ribosomal protein L14 protein-coding chr13-334 chr13 113454020 113454230 + 20.3 0.000 promoter-TSS (NM_138430) promoter-TSS (NM_138430) -637 NM_138430 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding chr2-1343 chr2 177618730 177618940 + 20.3 0.000 promoter-TSS (NM_152275) promoter-TSS (NM_152275) -93 NM_152275 92104 Hs.128384 NM_152275 ENSG00000197557 TTC30A IFT70A|TTC30B tetratricopeptide repeat domain 30A protein-coding chr4-1342 chr4 182554024 182554234 + 20.3 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 310727 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr14-524 chr14 69650946 69651156 + 20.3 0.000 intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 39455 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr7-1648 chr7 47552768 47552978 + 20.3 0.000 intron (NM_022748, intron 1 of 30) Tigger1|DNA|TcMar-Tigger 29238 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr3-479 chr3 48013381 48013591 + 20.3 0.000 intron (NM_002375, intron 1 of 18) MIR3|SINE|MIR 75362 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr9-628 chr9 33132274 33132484 + 20.3 0.000 intron (NM_001497, intron 2 of 5) MER103C|DNA|hAT-Charlie 23687 NR_162131 113219452 NR_162131 MIR12117 - microRNA 12117 ncRNA chr12-1410 chr12 21607808 21608018 + 20.1 0.000 Intergenic Intergenic -3066 NM_021957 2998 Hs.82614 NM_021957 ENSG00000111713 GYS2 - glycogen synthase 2 protein-coding chr9-745 chr9 17018273 17018483 + 20.1 0.000 Intergenic Intergenic -116662 NM_001286984 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr12-796 chr12 108717409 108717619 + 20.1 0.000 intron (NM_014325, intron 1 of 10) L2b|LINE|L2 13329 NM_001276471 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr1-917 chr1 42952909 42953119 + 20.1 0.000 intron (NM_006516, intron 1 of 9) intron (NM_006516, intron 1 of 9) 5854 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr15-146 chr15 34209789 34209999 + 20.1 0.000 intron (NM_024713, intron 1 of 9) CpG 202 NM_024713 79768 Hs.633566 NM_024713 ENSG00000134152 KATNBL1 C15orf29 katanin regulatory subunit B1 like 1 protein-coding chr1-1868 chr1 93827882 93828092 + 20.1 0.000 intron (NM_001261408, intron 2 of 13) MER39|LTR|ERV1 -18845 NR_030621 100126348 NR_030621 ENSG00000211575 MIR760 MIRN760|hsa-mir-760|mir-760 microRNA 760 ncRNA chr20-173 chr20 37527929 37528139 + 20.1 0.000 promoter-TSS (NM_006698) promoter-TSS (NM_006698) -103 NM_001167820 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr9-684 chr9 37104520 37104730 + 20.1 0.000 Intergenic L2|LINE|L2 -15847 NM_001289119 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr15-373 chr15 75666789 75666999 + 20.1 0.000 Intergenic Intergenic 17887 NM_001318146 257364 Hs.8705 NM_153271 ENSG00000173548 SNX33 SH3PX3|SH3PXD3C|SNX30 sorting nexin 33 protein-coding chr4-1074 chr4 127251562 127251772 + 20.1 0.000 Intergenic Intergenic -381290 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr2-1857 chr2 237674920 237675130 + 20.1 0.000 intron (NM_001137550, intron 1 of 23) LTR50|LTR|ERVL -17139 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr20-310 chr20 2102376 2102586 + 20.1 0.000 intron (NM_080836, intron 1 of 3) CpG 654 NM_080836 140901 Hs.100057 NM_080836 ENSG00000125834 STK35 CLIK1|STK35L1 serine/threonine kinase 35 protein-coding chr16-532 chr16 89289583 89289793 + 20.1 0.000 intron (NR_045839, intron 8 of 9) intron (NR_045839, intron 8 of 9) -6440 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr6-546 chr6 158040698 158040908 + 20.1 0.000 intron (NM_003898, intron 4 of 26) intron (NM_003898, intron 4 of 26) 23710 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr3-837 chr3 10366751 10366961 + 20.1 0.000 intron (NM_001001331, intron 12 of 22) intron (NM_001001331, intron 12 of 22) 27706 NR_030614 100126334 NR_030614 ENSG00000216135 MIR885 MIRN885|hsa-mir-885|mir-885 microRNA 885 ncRNA chr8-389 chr8 55772843 55773053 + 20.1 0.000 promoter-TSS (NM_001363184) promoter-TSS (NM_001363184) 430 NM_001286661 137695 Hs.420076 NM_152417 ENSG00000167904 TMEM68 - transmembrane protein 68 protein-coding chr18-296 chr18 36628872 36629082 + 20.1 0.000 intron (NM_001281739, intron 10 of 23) L3|LINE|CR1 34441 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr17-898 chr17 60230456 60230666 + 20.1 0.000 TTS (NR_002999) TTS (NR_002999) 1084 NR_002999 677681 NR_002999 ENSG00000252577 SCARNA20 ACA66 small Cajal body-specific RNA 20 ncRNA chr6-687 chr6 13653300 13653510 + 20.1 0.000 intron (NM_005493, intron 4 of 13) intron (NM_005493, intron 4 of 13) 38070 NM_016167 51406 Hs.306242 NM_016167 ENSG00000225921 NOL7 C6orf90|PQBP3|RARG-1|dJ223E5.2 nucleolar protein 7 protein-coding chr15-797 chr15 63583191 63583401 + 20.1 0.000 intron (NM_001256702, intron 10 of 13) intron (NM_001256702, intron 10 of 13) -14091 NM_001367807 283807 Hs.631163 NM_203373 ENSG00000197361 FBXL22 Fbl22 F-box and leucine rich repeat protein 22 protein-coding chr12-388 chr12 53321381 53321591 + 20.1 0.000 5' UTR (NM_001173466, exon 1 of 15) 5' UTR (NM_001173466, exon 1 of 15) 124 NM_015665 8086 Hs.369144 NM_015665 ENSG00000094914 AAAS AAA|AAASb|ADRACALA|ADRACALIN|ALADIN|GL003 aladin WD repeat nucleoporin protein-coding chr20-691 chr20 64034405 64034615 + 20.1 0.000 5' UTR (NM_001348090, exon 3 of 7) 5' UTR (NM_001348090, exon 3 of 7) 783 NM_001348090 284739 Hs.97840 NM_207349 ENSG00000196421 C20orf204 LINC00176|NCRNA00176|PRR17 chromosome 20 open reading frame 204 protein-coding chr11-290 chr11 66856202 66856412 + 20.1 0.000 promoter-TSS (NM_001363524) promoter-TSS (NM_001363524) -757 NM_001363524 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr4-359 chr4 107931464 107931674 + 20.1 0.000 promoter-TSS (NM_183075) promoter-TSS (NM_183075) 20 NM_183075 113612 Hs.109087 NM_183075 ENSG00000155016 CYP2U1 P450TEC|SPG49|SPG56 cytochrome P450 family 2 subfamily U member 1 protein-coding chr11-762 chr11 62761447 62761657 + 20.1 0.000 promoter-TSS (NM_002696) promoter-TSS (NM_002696) -28 NM_002696 5436 Hs.14839 NM_002696 ENSG00000168002 POLR2G RPB19|RPB7|hRPB19|hsRPB7 RNA polymerase II subunit G protein-coding chr19-1287 chr19 52857725 52857935 + 20.1 0.000 promoter-TSS (NR_102300) promoter-TSS (NR_102300) -211 NM_001277120 90333 Hs.467223 NM_199132 ENSG00000204604 ZNF468 - zinc finger protein 468 protein-coding chr6-584 chr6 134253817 134254027 + 20.1 0.000 intron (NM_001143676, intron 2 of 13) intron (NM_001143676, intron 2 of 13) 64136 NM_001143676 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr5-1256 chr5 44789571 44789781 + 20.1 0.000 intron (NR_109863, intron 1 of 3) HERVK9-int|LTR|ERVK 19117 NR_109862 100506674 Hs.575213 NR_109862 MRPS30-DT BRCAT54 MRPS30 divergent transcript ncRNA chr16-1331 chr16 27330562 27330772 + 20.1 0.000 intron (NM_000418, intron 2 of 10) L1MD2|LINE|L1 16693 NM_001257997 3566 Hs.513457 NM_000418 ENSG00000077238 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding chr6-465 chr6 116439633 116439843 + 20.1 0.000 non-coding (NR_136524, exon 5 of 5) non-coding (NR_136524, exon 5 of 5) -21637 NM_001276460 441168 Hs.381220 NM_001010919 ENSG00000188820 CALHM6 C6orf187|FAM26F|INAM|dJ93H18.5 calcium homeostasis modulator family member 6 protein-coding chr5-953 chr5 120682941 120683151 + 20.1 0.000 intron (NM_001308088, intron 3 of 3) L2b|LINE|L2 151582 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr8-400 chr8 140527703 140527913 + 20.1 0.000 3' UTR (NM_012154, exon 19 of 19) 3' UTR (NM_012154, exon 19 of 19) 15812 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr2-1318 chr2 56239471 56239681 + 20.1 0.000 intron (NM_001348516, intron 2 of 2) intron (NM_001348516, intron 2 of 2) -53806 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr17-679 chr17 42520256 42520466 + 20.1 0.000 intron (NM_005177, intron 20 of 20) intron (NM_005177, intron 20 of 20) 6173 NR_049808 100847046 NR_049808 ENSG00000283929 MIR5010 mir-5010 microRNA 5010 ncRNA chr5-502 chr5 297082 297292 + 20.1 0.000 intron (NM_001267557, intron 2 of 3) intron (NM_001267557, intron 2 of 3) -6989 NM_001242412 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr17-1103 chr17 77457912 77458122 + 20.1 0.000 intron (NM_001293698, intron 1 of 9) intron (NM_001293698, intron 1 of 9) 3990 NM_001293698 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr3-1081 chr3 152406353 152406563 + 20.1 0.000 intron (NM_001314057, intron 3 of 11) intron (NM_001314057, intron 3 of 11) -65468 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr5-1038 chr5 169696143 169696353 + 20.1 0.000 intron (NR_156756, intron 10 of 52) intron (NR_156756, intron 10 of 52) 58973 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr3-754 chr3 189103427 189103637 + 20.1 0.000 Intergenic Intergenic -68439 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr12-298 chr12 110048352 110048562 + 20.1 0.000 non-coding (NR_148516, exon 1 of 2) non-coding (NR_148516, exon 1 of 2) 190 NR_148516 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr2-1793 chr2 8193267 8193477 + 20.1 0.000 intron (NR_034135, intron 7 of 8) intron (NR_034135, intron 7 of 8) 135047 NR_034135 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr22-510 chr22 50411996 50412206 + 20.1 0.000 intron (NM_001242899, intron 4 of 22) L1MD1|LINE|L1 4659 NR_162128 113218480 NR_162128 MIR12114 - microRNA 12114 ncRNA chr19-797 chr19 40690794 40691004 + 20.1 0.000 promoter-TSS (NM_001289980) promoter-TSS (NM_001289980) -248 NM_001289979 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr7-627 chr7 55027063 55027273 + 20.1 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) 8136 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr2-2353 chr2 208363475 208363685 + 20.1 0.000 intron (NM_001309516, intron 1 of 12) L1PA15|LINE|L1 3888 NM_001309516 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr14-351 chr14 96246344 96246554 + 20.1 0.000 Intergenic Intergenic -9761 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr10-1136 chr10 29344425 29344635 + 20.1 0.000 Intergenic Intergenic 55460 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr3-1438 chr3 22609178 22609388 + 20.1 0.000 Intergenic Intergenic 593295 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr1-1951 chr1 59645896 59646106 + 20.1 0.000 intron (NM_001350790, intron 12 of 16) intron (NM_001350790, intron 12 of 16) 87295 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr13-478 chr13 50156265 50156475 + 20.1 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) -15648 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr3-925 chr3 53287292 53287502 + 20.1 0.000 3' UTR (NM_001290205, exon 11 of 11) 3' UTR (NM_001290205, exon 11 of 11) -31283 NR_047580 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr1-1567 chr1 9950385 9950595 + 20.1 0.000 TTS (NR_158969) TTS (NR_158969) 7015 NM_022787 64802 Hs.633762 NM_022787 ENSG00000173614 NMNAT1 LCA9|NMNAT|PNAT1 nicotinamide nucleotide adenylyltransferase 1 protein-coding chr18-368 chr18 54416524 54416734 + 20.1 0.000 Intergenic Intergenic 58712 NR_110234 162681 Hs.208701 NM_173529 ENSG00000166845 C18orf54 LAS2 chromosome 18 open reading frame 54 protein-coding chr17-539 chr17 1455441 1455651 + 20.1 0.000 intron (NM_005206, intron 1 of 2) intron (NM_005206, intron 1 of 2) 686 NM_016823 1398 Hs.461896 NM_005206 ENSG00000167193 CRK CRKII|p38 CRK proto-oncogene, adaptor protein protein-coding chr18-293 chr18 10010689 10010899 + 20.1 0.000 Intergenic Intergenic 96778 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr17-780 chr17 75405881 75406091 + 20.1 0.000 promoter-TSS (NM_203506) promoter-TSS (NM_203506) -83 NR_037449 100500841 NR_037449 ENSG00000264511 MIR3678 mir-3678 microRNA 3678 ncRNA chr16-895 chr16 731201 731411 + 20.1 0.000 intron (NM_001304799, intron 10 of 11) intron (NM_001304799, intron 10 of 11) 4200 NM_032304 84264 Hs.124015 NM_032304 ENSG00000103253 HAGHL - hydroxyacylglutathione hydrolase like protein-coding chr7-588 chr7 144835905 144836115 + 20.1 0.000 promoter-TSS (NM_001350885) promoter-TSS (NM_001350885) 43 NM_001350893 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr18-496 chr18 21257618 21257828 + 20.1 0.000 intron (NM_001142966, intron 1 of 32) intron (NM_001142966, intron 1 of 32) 15481 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr11-422 chr11 134224381 134224591 + 20.1 0.000 promoter-TSS (NM_052875) promoter-TSS (NM_052875) 46 NM_015261 23310 Hs.438550 NM_015261 ENSG00000151503 NCAPD3 CAP-D3|CAPD3|MCPH22|hCAP-D3|hHCP-6|hcp-6 non-SMC condensin II complex subunit D3 protein-coding chr5-1700 chr5 107469656 107469866 + 20.1 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 201176 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr21-144 chr21 30227823 30228033 + 20.1 0.000 Intergenic Intergenic -11831 NM_199328 9073 Hs.162209 NM_012132 ENSG00000156284 CLDN8 HEL-S-79 claudin 8 protein-coding chr11-2264 chr11 122601558 122601768 + 20.1 0.000 Intergenic Intergenic -54059 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr5-571 chr5 95823781 95823991 + 20.1 0.000 Intergenic Intergenic -1013 NM_001243659 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr6-1002 chr6 19472259 19472469 + 20.1 0.000 Intergenic Intergenic 22543 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA chr10-746 chr10 19847729 19847939 + 20.1 0.000 intron (NM_032812, intron 1 of 13) MIR|SINE|MIR 31402 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr9-703 chr9 84839670 84839880 + 20.1 0.000 intron (NM_001018064, intron 12 of 17) intron (NM_001018064, intron 12 of 17) 133874 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr5-655 chr5 14267305 14267515 + 20.1 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 124068 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr6-808 chr6 40733356 40733566 + 20.1 0.000 Intergenic L1ME2z|LINE|L1 -146097 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr9-624 chr9 136306146 136306356 + 20.1 0.000 intron (NM_001291516, intron 1 of 9) intron (NM_001291516, intron 1 of 9) 650 NM_001291516 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr3-1785 chr3 23160032 23160242 + 20.1 0.000 Intergenic Intergenic 42441 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr21-77 chr21 34582956 34583166 + 20.1 0.000 intron (NM_004414, intron 1 of 3) intron (NM_004414, intron 1 of 3) 30782 NM_001285389 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr4-279 chr4 186623028 186623238 + 20.1 0.000 intron (NM_005245, intron 9 of 26) intron (NM_005245, intron 9 of 26) -67566 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr3-997 chr3 42749764 42749974 + 20.1 0.000 intron (NM_144719, intron 5 of 15) intron (NM_144719, intron 5 of 15) 17294 NR_046732 100874114 Hs.669654 NR_046732 ENSG00000173811 CCDC13-AS1 - CCDC13 antisense RNA 1 ncRNA chr9-1015 chr9 109986755 109986965 + 20.1 0.000 intron (NM_147150, intron 6 of 9) intron (NM_147150, intron 6 of 9) -61738 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr11-788 chr11 10669405 10669615 + 20.1 0.000 intron (NM_130385, intron 1 of 20) intron (NM_130385, intron 1 of 20) -17209 NM_001098579 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr12-735 chr12 121224737 121224947 + 20.1 0.000 intron (NR_046373, intron 4 of 10) intron (NR_046373, intron 4 of 10) 14713 NM_002560 5025 Hs.321709 NM_002560 ENSG00000135124 P2RX4 P2X4|P2X4R purinergic receptor P2X 4 protein-coding chr17-1224 chr17 46922909 46923119 + 20.1 0.000 promoter-TSS (NR_148350) promoter-TSS (NR_148350) -103 NM_001353115 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr9-741 chr9 137453892 137454102 + 20.1 0.000 intron (NM_015537, intron 6 of 14) intron (NM_015537, intron 6 of 14) -3911 NR_106964 102466223 NR_106964 ENSG00000284317 MIR7114 hsa-mir-7114 microRNA 7114 ncRNA chr11-1004 chr11 10778779 10778989 + 20.1 0.000 exon (NM_001346279, exon 24 of 24) exon (NM_001346279, exon 24 of 24) 22724 NR_004403 692223 Hs.723086 NR_004403 ENSG00000238622 SNORD97 U97 small nucleolar RNA, C/D box 97 snoRNA chr1-1748 chr1 204320510 204320720 + 20.1 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 39314 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr2-1371 chr2 11306168 11306378 + 20.1 0.000 intron (NM_001321643, intron 1 of 32) L2a|LINE|L2 38363 NM_004850 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr11-1429 chr11 64464090 64464300 + 20.1 0.000 Intergenic Intergenic 15138 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr2-1074 chr2 27212052 27212262 + 20.1 0.000 promoter-TSS (NM_001170795) promoter-TSS (NM_001170795) 111 NM_021095 8884 Hs.435735 NM_021095 ENSG00000138074 SLC5A6 SMVT solute carrier family 5 member 6 protein-coding chr17-863 chr17 68378311 68378521 + 20.1 0.000 intron (NM_001352899, intron 8 of 12) intron (NM_001352899, intron 8 of 12) -35207 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr14-435 chr14 74571988 74572198 + 20.1 0.000 intron (NM_000428, intron 3 of 35) intron (NM_000428, intron 3 of 35) 40144 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr5-561 chr5 33440724 33440934 + 20.1 0.000 promoter-TSS (NR_047678) promoter-TSS (NR_047678) 53 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr19-1150 chr19 51338963 51339173 + 20.1 0.000 exon (NM_001163922, exon 5 of 10) exon (NM_001163922, exon 5 of 10) 3056 NM_001163922 147645 Hs.293236 NM_001163922 ENSG00000186806 VSIG10L - V-set and immunoglobulin domain containing 10 like protein-coding chr7-418 chr7 29622706 29622916 + 20.1 0.000 Intergenic Intergenic 57278 NM_001329997 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding chr2-1090 chr2 234674874 234675084 + 20.1 0.000 Intergenic Intergenic -7689 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr4-728 chr4 186622026 186622236 + 20.1 0.000 intron (NM_005245, intron 9 of 26) intron (NM_005245, intron 9 of 26) -66564 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr15-682 chr15 90553426 90553636 + 20.1 0.000 intron (NM_001042574, intron 2 of 14) intron (NM_001042574, intron 2 of 14) 23608 NM_001042574 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr10-946 chr10 28911042 28911252 + 20.1 0.000 Intergenic Intergenic 64739 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr12-179 chr12 53047026 53047236 + 20.1 0.000 intron (NM_198316, intron 1 of 28) CpG 105 NM_198316 23371 Hs.6147 NM_015319 ENSG00000111077 TNS2 C1-TEN|C1TEN|TENC1 tensin 2 protein-coding chr5-907 chr5 56569660 56569870 + 20.1 0.000 intron (NR_161255, intron 1 of 5) intron (NR_161255, intron 1 of 5) 36491 NR_161255 101928448 Hs.208052 NM_001287053 ENSG00000225940 C5orf67 - chromosome 5 open reading frame 67 ncRNA chr5-383 chr5 176361646 176361856 + 20.1 0.000 promoter-TSS (NM_001079684) promoter-TSS (NM_001079684) 13 NM_020444 57179 Hs.743257 NM_020444 ENSG00000122203 KIAA1191 p33MONOX|p60MONOX KIAA1191 protein-coding chr12-1528 chr12 80053061 80053271 + 20.1 0.000 Intergenic Intergenic -46371 NM_001368062 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr1-1201 chr1 146377088 146377298 + 20.1 0.000 TTS (NR_004400).6 TTS (NR_004400).6 386 NR_004408 26869 NR_004408 ENSG00000207513 RNU1-3 HSD4|RNU1G3 RNA, U1 small nuclear 3 snRNA chr17-904 chr17 67978685 67978895 + 20.1 0.000 intron (NM_182641, intron 27 of 27) intron (NM_182641, intron 27 of 27) 14816 NM_181655 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr19-929 chr19 9790227 9790437 + 20.1 0.000 intron (NR_148545, intron 1 of 1) LTR13A|LTR|ERVK 2848 NR_148545 100505555 Hs.445295 NR_148545 ENSG00000196605 LOC100505555 - uncharacterized LOC100505555 ncRNA chr2-718 chr2 173080110 173080320 + 20.1 0.000 intron (NM_133646, intron 1 of 11) Tigger3b|DNA|TcMar-Tigger 4369 NM_016653 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr2-1303 chr2 238518549 238518759 + 20.1 0.000 intron (NR_037809, intron 2 of 2) intron (NR_037809, intron 2 of 2) 36845 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr22-334 chr22 38272494 38272704 + 20.1 0.000 promoter-TSS (NM_001195071) promoter-TSS (NM_001195071) 65 NM_001195071 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr1-1303 chr1 25567159 25567369 + 20.1 0.000 3' UTR (NM_015627, exon 9 of 9) 3' UTR (NM_015627, exon 9 of 9) 23679 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr12-1236 chr12 25210964 25211174 + 20.1 0.000 intron (NM_001369787, intron 4 of 4) intron (NM_001369787, intron 4 of 4) 15832 NM_001001660 144363 Hs.209151 NM_001001660 ENSG00000205707 ETFRF1 LYRM5 electron transfer flavoprotein regulatory factor 1 protein-coding chr3-464 chr3 195489473 195489683 + 20.1 0.000 Intergenic Intergenic -46558 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr16-755 chr16 49652663 49652873 + 20.1 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) 11556 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr3-905 chr3 171310088 171310298 + 20.1 0.000 intron (NM_001161563, intron 2 of 31) intron (NM_001161563, intron 2 of 31) 150212 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr1-1300 chr1 10399622 10399832 + 20.1 0.000 intron (NM_001304451, intron 2 of 11) CpG-416 663 NM_001304452 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr5-892 chr5 149730948 149731158 + 20.1 0.000 intron (NM_001172698, intron 1 of 10) CpG 743 NM_133263 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr17-876 chr17 8151306 8151516 + 20.1 0.000 intron (NM_002616, intron 1 of 22) CpG 993 NM_002616 5187 Hs.445534 NM_002616 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian regulator 1 protein-coding chr8-681 chr8 99218048 99218258 + 20.1 0.000 intron (NM_017890, intron 17 of 61) MER58C|DNA|hAT-Charlie 204887 NM_015243 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr16-1157 chr16 67181558 67181768 + 20.1 0.000 5' UTR (NM_001369680, exon 2 of 8) 5' UTR (NM_001369680, exon 2 of 8) 2300 NM_001369681 653319 Hs.651201 NM_001040715 ENSG00000196123 KIAA0895L - KIAA0895 like protein-coding chr3-1319 chr3 38031206 38031416 + 20.1 0.000 Intergenic Intergenic -1669 NM_006225 5333 Hs.80776 NM_006225 ENSG00000187091 PLCD1 NDNC3|PLC-III phospholipase C delta 1 protein-coding chr3-541 chr3 49029346 49029556 + 20.1 0.000 promoter-TSS (NM_000884) promoter-TSS (NM_000884) -53 NM_000884 3615 Hs.654400 NM_000884 ENSG00000178035 IMPDH2 IMPD2|IMPDH-II inosine monophosphate dehydrogenase 2 protein-coding chr8-368 chr8 124254916 124255126 + 20.1 0.000 Intergenic Intergenic -7623 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr9-1074 chr9 131501181 131501391 + 20.1 0.000 Intergenic Intergenic -1616 NM_001136113 10585 Hs.522449 NM_007171 ENSG00000130714 POMT1 LGMD2K|LGMDR11|MDDGA1|MDDGB1|MDDGC1|RT protein O-mannosyltransferase 1 protein-coding chr19-875 chr19 18895216 18895426 + 20.1 0.000 intron (NM_001290265, intron 1 of 5) CpG 837 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr15-346 chr15 78872778 78872988 + 20.1 0.000 promoter-TSS (NM_001265605) promoter-TSS (NM_001265605) -7 NM_006791 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chr1-456 chr1 1040787 1040997 + 20.1 0.000 intron (NM_198576, intron 4 of 35) CpG-33 6899 NM_001364727 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr8-648 chr8 98147103 98147313 + 20.1 0.000 intron (NM_015029, intron 12 of 15) intron (NM_015029, intron 12 of 15) 29368 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr16-634 chr16 626871 627081 + 20.1 0.000 intron (NM_021168, intron 5 of 5) intron (NM_021168, intron 5 of 5) -4009 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr1-1699 chr1 245155443 245155653 + 20.1 0.000 intron (NM_018012, intron 1 of 14) CpG-2495 563 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr3-1173 chr3 150147560 150147770 + 20.1 0.000 intron (NR_136187, intron 2 of 2) intron (NR_136187, intron 2 of 2) 51222 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr5-558 chr5 157366859 157367069 + 20.1 0.000 intron (NR_136205, intron 1 of 2) intron (NR_136205, intron 1 of 2) -21287 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr5-687 chr5 172133478 172133688 + 20.1 0.000 intron (NM_005990, intron 2 of 18) intron (NM_005990, intron 2 of 18) 54641 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr1-1511 chr1 28087923 28088133 + 20.1 0.000 intron (NM_001282562, intron 1 of 16) intron (NM_001282562, intron 1 of 16) 582 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr7-1453 chr7 80403770 80403980 + 20.1 0.000 Intergenic LTR23|LTR|ERV1 -29436 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chr12-807 chr12 58364919 58365129 + 20.1 0.000 Intergenic Intergenic -226678 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr16-1022 chr16 88701006 88701216 + 20.1 0.000 intron (NM_178841, intron 2 of 5) intron (NM_178841, intron 2 of 5) 2470 NM_001171816 115992 Hs.513804 NM_178841 ENSG00000158717 RNF166 - ring finger protein 166 protein-coding chr1-1769 chr1 15680080 15680290 + 20.1 0.000 Intergenic L2|LINE|L2 -4135 NM_015164 23207 Hs.646775 NM_015164 ENSG00000116786 PLEKHM2 SKIP pleckstrin homology and RUN domain containing M2 protein-coding chr17-829 chr17 62109596 62109806 + 20.1 0.000 Intergenic Intergenic -44423 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr22-547 chr22 45290802 45291012 + 20.1 0.000 intron (NM_006953, intron 4 of 5) MER1A|DNA|hAT-Charlie 5958 NM_001167574 7380 Hs.632787 NM_006953 ENSG00000100373 UPK3A UP3A|UPIII|UPIIIA|UPK3 uroplakin 3A protein-coding chr6-610 chr6 152696665 152696875 + 20.1 0.000 Intergenic Intergenic -1125 NM_025107 80177 Hs.18160 NM_025107 ENSG00000120279 MYCT1 MTLC MYC target 1 protein-coding chr17-657 chr17 83174541 83174751 + 20.1 0.000 Intergenic Intergenic -52251 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr12-1615 chr12 79764753 79764963 + 20.1 0.000 Intergenic L2a|LINE|L2 -73761 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr1-1194 chr1 51637162 51637372 + 20.1 0.000 intron (NM_148906, intron 1 of 22) AluSq|SINE|Alu 20175 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr16-911 chr16 66988502 66988712 + 20.1 0.000 promoter-TSS (NM_173815) promoter-TSS (NM_173815) 18 NM_173815 283848 Hs.346947 NM_173815 ENSG00000172824 CES4A CES6|CES8 carboxylesterase 4A protein-coding chr6-791 chr6 138773409 138773619 + 20.1 0.000 promoter-TSS (NM_015439) promoter-TSS (NM_015439) -6 NM_015439 25901 Hs.412019 NM_015439 ENSG00000024862 CCDC28A C6orf80|CCRL1AP coiled-coil domain containing 28A protein-coding chr20-278 chr20 16729924 16730134 + 20.1 0.000 promoter-TSS (NM_003092) promoter-TSS (NM_003092) 3 NM_198220 6629 Hs.280378 NM_003092 ENSG00000125870 SNRPB2 Msl1|U2B'' small nuclear ribonucleoprotein polypeptide B2 protein-coding chr1-1304 chr1 27538908 27539118 + 20.1 0.000 intron (NM_001029882, intron 6 of 6) intron (NM_001029882, intron 6 of 6) -48846 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr5-906 chr5 55570090 55570300 + 20.1 0.000 Intergenic Intergenic -35117 NM_176895 8611 Hs.696231 NM_003711 ENSG00000067113 PLPP1 LLP1a|LPP1|PAP-2a|PAP2|PPAP2A phospholipid phosphatase 1 protein-coding chr12-790 chr12 66647128 66647338 + 20.1 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) 31843 NM_001366722 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr3-764 chr3 73727736 73727946 + 20.1 0.000 Intergenic Intergenic -81403 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr11-704 chr11 69044290 69044500 + 20.1 0.000 Intergenic Intergenic -4537 NM_139075 219931 Hs.131851 NM_139075 ENSG00000162341 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding chr15-555 chr15 51875445 51875655 + 20.1 0.000 intron (NM_014547, intron 3 of 9) intron (NM_014547, intron 3 of 9) 45897 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr11-948 chr11 131674213 131674423 + 20.1 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -10762 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr1-1674 chr1 52708417 52708627 + 20.1 0.000 Intergenic Intergenic -10175 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chr4-274 chr4 86831292 86831502 + 20.1 0.000 intron (NM_197965, intron 3 of 5) intron (NM_197965, intron 3 of 5) 17987 NM_197965 345274 Hs.452996 NM_197965 ENSG00000145283 SLC10A6 SOAT solute carrier family 10 member 6 protein-coding chr8-955 chr8 80991928 80992138 + 20.1 0.000 intron (NM_018440, intron 4 of 8) intron (NM_018440, intron 4 of 8) -117252 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr1-2276 chr1 234925947 234926157 + 20.1 0.000 Intergenic Intergenic 37947 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr1-1289 chr1 244864448 244864658 + 20.1 0.000 promoter-TSS (NM_004501) promoter-TSS (NM_004501) -10 NM_031844 3192 Hs.106212 NM_004501 ENSG00000153187 HNRNPU EIEE54|GRIP120|HNRNPU-AS1|HNRPU|SAF-A|SAFA|U21.1|hnRNP U|pp120 heterogeneous nuclear ribonucleoprotein U protein-coding chr6-521 chr6 158481889 158482099 + 20.1 0.000 intron (NM_020245, intron 8 of 13) intron (NM_020245, intron 8 of 13) -54442 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr19-806 chr19 13022776 13022986 + 20.1 0.000 intron (NM_001365902, intron 1 of 10) intron (NM_001365902, intron 1 of 10) -1091 NM_001271044 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr4-1203 chr4 87192302 87192512 + 20.1 0.000 intron (NM_020803, intron 2 of 9) L1PA16|LINE|L1 27861 NM_001292003 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr5-607 chr5 43649355 43649565 + 20.1 0.000 intron (NM_012343, intron 11 of 21) intron (NM_012343, intron 11 of 21) -46230 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr14-925 chr14 103528993 103529203 + 20.0 0.000 promoter-TSS (NM_152307) promoter-TSS (NM_152307) -98 NM_152307 115708 Hs.525610 NM_152307 ENSG00000166166 TRMT61A C14orf172|GCD14|Gcd14p|TRM61|hTRM61 tRNA methyltransferase 61A protein-coding chr11-986 chr11 85664882 85665092 + 20.0 0.000 non-coding (NR_028024, exon 1 of 2) non-coding (NR_028024, exon 1 of 2) 142 NR_028027 58487 Hs.535319 NM_021212 ENSG00000137504 CREBZF SMILE|ZF CREB/ATF bZIP transcription factor protein-coding chr1-751 chr1 211830614 211830824 + 20.0 0.000 promoter-TSS (NR_135820) promoter-TSS (NR_135820) 44 NM_014873 9926 Hs.744851 NM_014873 ENSG00000123684 LPGAT1 FAM34A|FAM34A1|NET8 lysophosphatidylglycerol acyltransferase 1 protein-coding chr8-491 chr8 28351278 28351488 + 20.0 0.000 intron (NM_018660, intron 7 of 9) intron (NM_018660, intron 7 of 9) 12736 NM_001284244 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr5-881 chr5 66143999 66144209 + 20.0 0.000 promoter-TSS (NM_001270492) promoter-TSS (NM_001270492) -196 NM_001077199 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding chr22-426 chr22 38176152 38176362 + 20.0 0.000 intron (NM_001199562, intron 1 of 15) intron (NM_001199562, intron 1 of 15) 5573 NM_003560 8398 Hs.170479 NM_003560 ENSG00000184381 PLA2G6 CaI-PLA2|GVI|INAD1|IPLA2-VIA|NBIA2|NBIA2A|NBIA2B|PARK14|PLA2|PNPLA9|iPLA2|iPLA2beta phospholipase A2 group VI protein-coding chr2-2019 chr2 95728973 95729183 + 20.0 0.000 Intergenic Intergenic 97903 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr3-610 chr3 108222239 108222449 + 20.0 0.000 promoter-TSS (NM_018010) promoter-TSS (NM_018010) 80 NM_018010 55081 Hs.412196 NM_018010 ENSG00000114446 IFT57 ESRRBL1|HIPPI|MHS4R2|OFD18 intraflagellar transport 57 protein-coding chr15-350 chr15 25831035 25831245 + 20.0 0.000 intron (NM_024490, intron 1 of 20) intron (NM_024490, intron 1 of 20) 17685 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr5-999 chr5 72597780 72597990 + 20.0 0.000 intron (NR_105007, intron 1 of 2) intron (NR_105007, intron 1 of 2) 40808 NR_105008 102503427 Hs.429280 NR_105008 LOC102503427 - uncharacterized LOC102503427 ncRNA chr12-824 chr12 31517966 31518176 + 20.0 0.000 intron (NM_001308339, intron 1 of 22) intron (NM_001308339, intron 1 of 22) -71852 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr8-373 chr8 42207549 42207759 + 20.0 0.000 promoter-TSS (NM_033011) promoter-TSS (NM_033011) -89 NM_033011 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr2-1647 chr2 38535987 38536197 + 20.0 0.000 Intergenic CpG -20352 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chr12-787 chr12 48890714 48890924 + 20.0 0.000 Intergenic Intergenic -13314 NM_033124 85478 Hs.512805 NM_033124 ENSG00000139537 CCDC65 CFAP250|DRC2|FAP250|NYD-SP28 coiled-coil domain containing 65 protein-coding chr7-679 chr7 105269028 105269238 + 20.0 0.000 promoter-TSS (NM_001350744) promoter-TSS (NM_001350744) -56 NM_182691 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr10-1572 chr10 3132557 3132767 + 20.0 0.000 intron (NM_001242339, intron 20 of 23) intron (NM_001242339, intron 20 of 23) -1442 NR_132758 106633806 NR_132758 SNORD142 SNORA85|SNORD174|ZL68 small nucleolar RNA, C/D box 142 snoRNA chr8-788 chr8 79021049 79021259 + 20.0 0.000 Intergenic Intergenic 183625 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA chr17-824 chr17 50209558 50209768 + 20.0 0.000 Intergenic Intergenic -5031 NR_110806 101927230 Hs.514326 NR_110806 LINC01969 - long intergenic non-protein coding RNA 1969 ncRNA chr13-415 chr13 48500718 48500928 + 20.0 0.000 intron (NM_001352426, intron 10 of 12) intron (NM_001352426, intron 10 of 12) 32257 NR_147985 1102 Hs.652712 NM_001268 ENSG00000136161 RCBTB2 CHC1L|RLG RCC1 and BTB domain containing protein 2 protein-coding chr9-1021 chr9 114502324 114502534 + 20.0 0.000 intron (NM_015404, intron 1 of 11) intron (NM_015404, intron 1 of 11) 786 NM_001083885 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr19-1095 chr19 47391473 47391683 + 20.0 0.000 Intergenic L1MB8|LINE|L1 27949 NM_001009813 56917 Hs.380923 NM_020160 ENSG00000105419 MEIS3 MRG2 Meis homeobox 3 protein-coding chr20-351 chr20 17968833 17969043 + 20.0 0.000 promoter-TSS (NM_001310339) promoter-TSS (NM_001310339) -5 NM_001363738 92667 Hs.320823 NM_052865 ENSG00000125871 MGME1 C20orf72|DDK1|MTDPS11|bA504H3.4 mitochondrial genome maintenance exonuclease 1 protein-coding chr14-316 chr14 103361900 103362110 + 20.0 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -23359 NM_001128921 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr16-888 chr16 88307004 88307214 + 20.0 0.000 Intergenic L1MB7|LINE|L1 112828 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr13-185 chr13 28329813 28330023 + 20.0 0.000 intron (NM_002019, intron 18 of 29) intron (NM_002019, intron 18 of 29) 165210 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr3-829 chr3 160006521 160006731 + 20.0 0.000 intron (NR_108088, intron 6 of 9) intron (NR_108088, intron 6 of 9) -14023 NR_104132 730109 Hs.99333 NR_104132 LINC01100 - long intergenic non-protein coding RNA 1100 ncRNA chr17-572 chr17 42964317 42964527 + 20.0 0.000 promoter-TSS (NM_001261434) promoter-TSS (NM_001261434) 32 NM_001261434 80755 Hs.317403 NM_001261434 ENSG00000266967 AARSD1 - alanyl-tRNA synthetase domain containing 1 protein-coding chr5-678 chr5 76814272 76814482 + 20.0 0.000 Intergenic L2a|LINE|L2 -4653 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr2-1071 chr2 20221273 20221483 + 20.0 0.000 intron (NM_001006946, intron 2 of 5) intron (NM_001006946, intron 2 of 5) 3752 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr22-539 chr22 50607795 50608005 + 20.0 0.000 intron (NM_012324, intron 10 of 11) intron (NM_012324, intron 10 of 11) 7107 NM_012324 23542 Hs.558180 NM_012324 ENSG00000008735 MAPK8IP2 IB-2|IB2|JIP2|PRKM8IPL mitogen-activated protein kinase 8 interacting protein 2 protein-coding chr11-722 chr11 62706135 62706345 + 20.0 0.000 promoter-TSS (NM_032667) promoter-TSS (NM_032667) 75 NM_001130702 26580 Hs.533709 NM_032667 ENSG00000168000 BSCL2 GNG3LG|HMN5|PELD|SPG17 BSCL2 lipid droplet biogenesis associated, seipin protein-coding chr5-713 chr5 82165984 82166194 + 20.0 0.000 intron (NM_031482, intron 4 of 7) intron (NM_031482, intron 4 of 7) 112265 NM_001025 6228 Hs.527193 NM_001025 ENSG00000186468 RPS23 BTDD|MABAS|MCINS|PAMAS|S23|uS12 ribosomal protein S23 protein-coding chr7-1409 chr7 24826159 24826369 + 20.0 0.000 intron (NR_104111, intron 15 of 21) intron (NR_104111, intron 15 of 21) 66357 NM_145320 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr17-1590 chr17 56654026 56654236 + 20.0 0.000 Intergenic Intergenic 60432 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr6-201 chr6 36547278 36547488 + 20.0 0.000 promoter-TSS (NM_001305102) promoter-TSS (NM_001305102) 96 NM_001305102 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr2-273 chr2 240452578 240452788 + 20.0 0.000 intron (NR_161169, intron 1 of 2) CpG -3318 NR_029702 406941 NR_029702 ENSG00000207611 MIR149 MIRN149|mir-149 microRNA 149 ncRNA chr6-880 chr6 81772867 81773077 + 20.0 0.000 Intergenic L2|LINE|L2 -20291 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr7-858 chr7 47494036 47494246 + 20.0 0.000 intron (NM_022748, intron 3 of 30) intron (NM_022748, intron 3 of 30) -29338 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr14-143 chr14 54488680 54488890 + 20.0 0.000 intron (NM_004124, intron 1 of 6) CpG 195 NM_004124 2764 Hs.151413 NM_004124 ENSG00000197045 GMFB GMF glia maturation factor beta protein-coding chr1-1622 chr1 147760917 147761127 + 20.0 0.000 promoter-TSS (NM_181703) promoter-TSS (NM_181703) -420 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chr17-588 chr17 65056825 65057035 + 20.0 0.000 promoter-TSS (NM_006572) promoter-TSS (NM_006572) -190 NM_006572 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr3-889 chr3 45479706 45479916 + 20.0 0.000 intron (NM_001368263, intron 9 of 20) intron (NM_001368263, intron 9 of 20) 29734 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr1-513 chr1 220046450 220046660 + 20.0 0.000 promoter-TSS (NM_004446) promoter-TSS (NM_004446) -50 NM_004446 2058 Hs.497788 NM_004446 ENSG00000136628 EPRS EARS|GLUPRORS|HLD15|PARS|PIG32|QARS|QPRS glutamyl-prolyl-tRNA synthetase protein-coding chr10-697 chr10 61463534 61463744 + 20.0 0.000 intron (NR_120643, intron 1 of 5) intron (NR_120643, intron 1 of 5) -10258 NR_134508 219623 Hs.623955 NM_178505 ENSG00000196932 TMEM26 - transmembrane protein 26 protein-coding chr5-1020 chr5 127826288 127826498 + 20.0 0.000 intron (NM_001317938, intron 5 of 6) L1PA16|LINE|L1 123004 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr7-914 chr7 134826230 134826440 + 20.0 0.000 intron (NM_033157, intron 1 of 14) intron (NM_033157, intron 1 of 14) 46701 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr1-2630 chr1 115210347 115210557 + 20.0 0.000 Intergenic Intergenic -72582 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr22-538 chr22 45653002 45653212 + 20.0 0.000 Intergenic Intergenic -18691 NM_001167621 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr1-2473 chr1 86788713 86788923 + 20.0 0.000 Intergenic L4_C_Mam|LINE|RTE-X 84242 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr21-157 chr21 32499676 32499886 + 20.0 0.000 intron (NR_104472, intron 4 of 6) intron (NR_104472, intron 4 of 6) 85742 NM_144659 140290 Hs.728804 NM_018277 ENSG00000242220 TCP10L C21orf77|PRED77|TCP10A-1|TCP10A-2 t-complex 10 like protein-coding chr6-471 chr6 21593634 21593844 + 20.0 0.000 promoter-TSS (NM_003107) promoter-TSS (NM_003107) -12 NM_003107 6659 Hs.643910 NM_003107 ENSG00000124766 SOX4 EVI16 SRY-box transcription factor 4 protein-coding chr12-856 chr12 4307863 4308073 + 20.0 0.000 Intergenic Intergenic -13245 NM_020375 57103 Hs.504545 NM_020375 ENSG00000078237 TIGAR C12orf5|FR2BP TP53 induced glycolysis regulatory phosphatase protein-coding chr16-560 chr16 81610232 81610442 + 20.0 0.000 intron (NM_030629, intron 2 of 20) intron (NM_030629, intron 2 of 20) -1011 NR_106759 102465251 NR_106759 ENSG00000275109 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA chr14-546 chr14 72801392 72801602 + 20.0 0.000 intron (NM_001280542, intron 1 of 10) intron (NM_001280542, intron 1 of 10) 91152 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr11-846 chr11 125170623 125170833 + 20.0 0.000 intron (NM_022062, intron 1 of 12) intron (NM_022062, intron 1 of 12) 5977 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr10-980 chr10 119761264 119761474 + 20.0 0.000 intron (NM_014937, intron 2 of 19) intron (NM_014937, intron 2 of 19) 35319 NM_014937 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr7-870 chr7 92633259 92633469 + 20.0 0.000 intron (NM_001259, intron 5 of 7) intron (NM_001259, intron 5 of 7) -42974 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr17-882 chr17 28743716 28743926 + 20.0 0.000 promoter-TSS (NM_004295) promoter-TSS (NM_004295) -190 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr17-943 chr17 17581034 17581244 + 20.0 0.000 intron (NM_001267551, intron 1 of 6) intron (NM_001267551, intron 1 of 6) 1307 NM_007169 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr1-1343 chr1 9201457 9201667 + 20.0 0.000 Intergenic Intergenic -19224 NR_132742 106614088 Hs.551837 NR_132742 ENSG00000228526 MIR34AHG - MIR34A host gene ncRNA chr9-992 chr9 12882609 12882819 + 20.0 0.000 Intergenic Intergenic -68325 NR_125775 101929467 Hs.586443 NR_125775 ENSG00000235448 LURAP1L-AS1 - LURAP1L antisense RNA 1 ncRNA chr11-1188 chr11 78104945 78105155 + 20.0 0.000 intron (NM_001007027, intron 10 of 13) intron (NM_001007027, intron 10 of 13) -25188 NM_001203262 100532726 Hs.407860 NM_001203260 ENSG00000259112 NDUFC2-KCTD14 - NDUFC2-KCTD14 readthrough protein-coding chr17-714 chr17 78353107 78353317 + 20.0 0.000 Intergenic CpG 6867 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr4-1069 chr4 111667088 111667298 + 20.0 0.000 Intergenic Intergenic -478261 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chrX-90 chrX 135521685 135521895 + 20.0 0.000 intron (NM_182540, intron 2 of 16) CpG -1116 NR_046740 100874118 Hs.602150 NR_046740 ENSG00000225235 INTS6L-AS1 DDX26B-AS1 INTS6L antisense RNA 1 ncRNA chr6-675 chr6 133991293 133991503 + 20.0 0.000 TTS (NM_004865) TTS (NM_004865) 38174 NM_004865 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr11-557 chr11 34302551 34302761 + 20.0 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 55354 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr2-2498 chr2 157053076 157053286 + 20.0 0.000 Intergenic Intergenic -204524 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr10-956 chr10 44195549 44195759 + 20.0 0.000 Intergenic Intergenic -97096 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr1-1299 chr1 9890376 9890586 + 20.0 0.000 intron (NM_020248, intron 1 of 5) intron (NM_020248, intron 1 of 5) 19788 NM_001012329 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr7-825 chr7 43872926 43873136 + 20.0 0.000 intron (NM_001204871, intron 4 of 6) intron (NM_001204871, intron 4 of 6) -3514 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr2-850 chr2 25997812 25998022 + 20.0 0.000 Intergenic Intergenic -15420 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C - kinesin family member 3C protein-coding chr1-1405 chr1 235296003 235296213 + 20.0 0.000 intron (NR_135074, intron 2 of 24) intron (NR_135074, intron 2 of 24) 31379 NM_001206794 51742 Hs.575782 NM_016374 ENSG00000054267 ARID4B BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180 AT-rich interaction domain 4B protein-coding chr10-731 chr10 31774510 31774720 + 20.0 0.000 Intergenic Intergenic 134311 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr7-1632 chr7 27808666 27808876 + 20.0 0.000 intron (NM_001362795, intron 13 of 14) intron (NM_001362795, intron 13 of 14) 68676 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr17-838 chr17 81917483 81917693 + 20.0 0.000 TTS (NM_032711) TTS (NM_032711) 588 NM_016538 51547 Hs.514636 NM_016538 ENSG00000187531 SIRT7 SIR2L7 sirtuin 7 protein-coding chr12-1364 chr12 50200905 50201115 + 20.0 0.000 5' UTR (NM_001243775, exon 1 of 5) 5' UTR (NM_001243775, exon 1 of 5) 523 NM_001243775 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr17-1309 chr17 65294250 65294460 + 20.0 0.000 Intergenic Intergenic 156985 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr16-860 chr16 87855962 87856172 + 20.0 0.000 intron (NM_003486, intron 1 of 9) intron (NM_003486, intron 1 of 9) 2171 NR_162122 113218509 NR_162122 MIR11401 - microRNA 11401 ncRNA chr2-715 chr2 150496120 150496330 + 20.0 0.000 Intergenic Intergenic -8530 NM_001254738 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr7-1236 chr7 137932926 137933136 + 20.0 0.000 promoter-TSS (NM_001318246) promoter-TSS (NM_001318246) -43 NM_001318246 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr22-477 chr22 30830023 30830233 + 20.0 0.000 intron (NM_001282741, intron 1 of 12) intron (NM_001282741, intron 1 of 12) 7612 NM_001282741 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr10-391 chr10 118342147 118342357 + 20.0 0.000 promoter-TSS (NM_001134672) promoter-TSS (NM_001134672) 72 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr4-133 chr4 39977768 39977978 + 20.0 0.000 promoter-TSS (NM_001100400) promoter-TSS (NM_001100400) 38 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr8-458 chr8 124973273 124973483 + 20.0 0.000 promoter-TSS (NM_152412) promoter-TSS (NM_152412) 83 NM_152412 137209 Hs.175350 NM_152412 ENSG00000180938 ZNF572 - zinc finger protein 572 protein-coding chr5-522 chr5 149062572 149062782 + 20.0 0.000 promoter-TSS (NR_030310) promoter-TSS (NR_030310) -268 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr5-676 chr5 55276848 55277058 + 20.0 0.000 intron (NR_144323, intron 13 of 26) intron (NR_144323, intron 13 of 26) 30741 NR_144324 54505 Hs.593268 NM_019030 ENSG00000067248 DHX29 DDX29 DExH-box helicase 29 protein-coding chr3-885 chr3 10173934 10174144 + 20.0 0.000 intron (NM_001570, intron 1 of 12) intron (NM_001570, intron 1 of 12) 9120 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr3-378 chr3 128846126 128846336 + 20.0 0.000 promoter-TSS (NR_162138) promoter-TSS (NR_162138) -577 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr18-238 chr18 9535546 9535756 + 20.0 0.000 intron (NM_006788, intron 9 of 9) intron (NM_006788, intron 9 of 9) 60138 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr2-323 chr2 63050344 63050554 + 20.0 0.000 promoter-TSS (NM_014562) promoter-TSS (NM_014562) -381 NR_130153 5013 Hs.734360 NM_014562 ENSG00000115507 OTX1 - orthodenticle homeobox 1 protein-coding chr4-224 chr4 145481682 145481892 + 20.0 0.000 promoter-TSS (NM_001354811) promoter-TSS (NM_001354811) -66 NM_005900 4086 Hs.604588 NM_005900 ENSG00000170365 SMAD1 BSP-1|BSP1|JV4-1|JV41|MADH1|MADR1 SMAD family member 1 protein-coding chr10-655 chr10 103238933 103239143 + 20.0 0.000 Intergenic Intergenic -6849 NM_001143909 729020 Hs.458437 NM_001143909 ENSG00000235376 RPEL1 - ribulose-5-phosphate-3-epimerase like 1 protein-coding chr6-881 chr6 82951535 82951745 + 20.0 0.000 intron (NR_146807, intron 10 of 10) intron (NR_146807, intron 10 of 10) 114201 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr8-399 chr8 134832517 134832727 + 20.0 0.000 Intergenic CpG -5447 NR_126028 552853 Hs.575612 NR_126028 ENSG00000253433 NCRNA00250 C8orf24 non-protein coding RNA 250 ncRNA chr11-1119 chr11 12598718 12598928 + 20.0 0.000 Intergenic Intergenic -75598 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11-560 chr11 68040403 68040613 + 20.0 0.000 intron (NM_001351059, intron 1 of 18) intron (NM_001351059, intron 1 of 18) 1483 NM_006019 10312 Hs.495985 NM_006019 ENSG00000110719 TCIRG1 ATP6N1C|ATP6V0A3|Atp6i|OC-116kDa|OC116|OPTB1|Stv1|TIRC7|Vph1|a3 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 protein-coding chr1-1950 chr1 58764536 58764746 + 20.0 0.000 Intergenic Intergenic 19406 NM_002228 3725 Hs.696684 NM_002228 ENSG00000177606 JUN AP-1|AP1|c-Jun|p39 Jun proto-oncogene, AP-1 transcription factor subunit protein-coding chr20-407 chr20 13525271 13525481 + 20.0 0.000 intron (NR_136631, intron 10 of 13) intron (NR_136631, intron 10 of 13) 113556 NM_017714 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr10-710 chr10 93383711 93383921 + 20.0 0.000 intron (NM_013451, intron 19 of 53) intron (NM_013451, intron 19 of 53) 98518 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr1-2677 chr1 199173345 199173555 + 20.0 0.000 intron (NR_147896, intron 3 of 3) intron (NR_147896, intron 3 of 3) 24852 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr12-1346 chr12 6617759 6617969 + 20.0 0.000 TTS (NM_001142961) TTS (NM_001142961) -10485 NM_001363606 1108 Hs.162233 NM_001273 ENSG00000111642 CHD4 CHD-4|Mi-2b|Mi2-BETA|SIHIWES chromodomain helicase DNA binding protein 4 protein-coding chr11-944 chr11 124115418 124115628 + 20.0 0.000 promoter-TSS (NM_001130142) promoter-TSS (NM_001130142) 73 NM_001130142 4013 Hs.152944 NM_014622 ENSG00000110002 VWA5A BCSC-1|BCSC1|LOH11CR2A von Willebrand factor A domain containing 5A protein-coding chr7-254 chr7 55018922 55019132 + 20.0 0.000 promoter-TSS (NM_001346898) promoter-TSS (NM_001346898) -5 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr7-983 chr7 66352374 66352584 + 20.0 0.000 intron (NM_003596, intron 3 of 5) intron (NM_003596, intron 3 of 5) 47929 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr16-733 chr16 88025259 88025469 + 20.0 0.000 intron (NM_001173539, intron 7 of 12) intron (NM_001173539, intron 7 of 12) 55346 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr9-742 chr9 137550374 137550584 + 20.0 0.000 promoter-TSS (NM_152286) promoter-TSS (NM_152286) -77 NM_152286 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr17-689 chr17 60135538 60135748 + 20.0 0.000 Intergenic CpG -14330 NM_000717 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr15-474 chr15 87816908 87817118 + 20.0 0.000 Intergenic Intergenic 129255 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr19-393 chr19 14689993 14690203 + 20.0 0.000 promoter-TSS (NM_032433) promoter-TSS (NM_032433) 50 NM_001352240 84449 Hs.515215 NM_032433 ENSG00000160961 ZNF333 - zinc finger protein 333 protein-coding chr20-184 chr20 36541246 36541456 + 20.0 0.000 promoter-TSS (NM_181526) promoter-TSS (NM_181526) -168 NM_181526 10398 Hs.504687 NM_006097 ENSG00000101335 MYL9 LC20|MLC-2C|MLC2|MRLC1|MYRL2 myosin light chain 9 protein-coding chr20-252 chr20 31596073 31596283 + 20.0 0.000 Intergenic Intergenic -9111 NM_181353 3397 Hs.504609 NM_002165 ENSG00000125968 ID1 ID|bHLHb24 inhibitor of DNA binding 1, HLH protein protein-coding chr4-702 chr4 54971593 54971803 + 20.0 0.000 Intergenic Intergenic 153897 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr2-1352 chr2 225026240 225026450 + 20.0 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) -15805 NR_039641 100616207 NR_039641 ENSG00000263828 MIR4439 - microRNA 4439 ncRNA chr9-789 chr9 129685669 129685879 + 20.0 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 20127 NM_016307 51450 Hs.660115 NM_016307 ENSG00000167157 PRRX2 PMX2|PRX2 paired related homeobox 2 protein-coding chr5-752 chr5 122312807 122313017 + 20.0 0.000 intron (NM_001308107, intron 1 of 8) intron (NM_001308107, intron 1 of 8) 675 NM_001308100 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr7-1924 chr7 14717786 14717996 + 20.0 0.000 intron (NM_001350717, intron 6 of 24) intron (NM_001350717, intron 6 of 24) 123559 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr5-601 chr5 16461916 16462126 + 20.0 0.000 intron (NM_033414, intron 3 of 5) intron (NM_033414, intron 3 of 5) 3779 NM_033414 90441 Hs.60300 NM_033414 ENSG00000173545 ZNF622 ZPR9 zinc finger protein 622 protein-coding chr6-1112 chr6 121597791 121598001 + 20.0 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 162250 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr19-915 chr19 41218891 41219101 + 20.0 0.000 promoter-TSS (NM_021913) promoter-TSS (NM_021913) -227 NM_021913 558 Hs.590970 NM_001699 ENSG00000167601 AXL ARK|JTK11|Tyro7|UFO AXL receptor tyrosine kinase protein-coding chr17-772 chr17 40719058 40719268 + 20.0 0.000 Intergenic Intergenic -15411 NM_019016 192666 Hs.87383 NM_019016 ENSG00000167916 KRT24 K24|KA24 keratin 24 protein-coding chr17-814 chr17 29140198 29140408 + 20.0 0.000 promoter-TSS (NM_001346768) promoter-TSS (NM_001346768) 86 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr19-2404 chr19 17594748 17594958 + 20.0 0.000 Intergenic HERVH-int|LTR|ERV1 39204 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr3-770 chr3 185729054 185729264 + 20.0 0.000 intron (NR_126326, intron 7 of 7) Charlie1a|DNA|hAT-Charlie 15907 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr16-628 chr16 31074185 31074395 + 20.0 0.000 promoter-TSS (NM_024706) promoter-TSS (NM_024706) -50 NM_024706 79759 Hs.102928 NM_024706 ENSG00000167394 ZNF668 - zinc finger protein 668 protein-coding chr6-1129 chr6 147949999 147950209 + 20.0 0.000 Intergenic Intergenic -322224 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr2-1476 chr2 86240952 86241162 + 20.0 0.000 intron (NM_001164732, intron 3 of 4) intron (NM_001164732, intron 3 of 4) 41600 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr6-494 chr6 43096666 43096876 + 20.0 0.000 intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) 19957 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr8-367 chr8 96928616 96928826 + 20.0 0.000 intron (NM_016134, intron 4 of 7) intron (NM_016134, intron 4 of 7) 283479 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr1-2197 chr1 59057293 59057503 + 20.0 0.000 intron (NR_110626, intron 2 of 2) intron (NR_110626, intron 2 of 2) 36922 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr10-851 chr10 64157218 64157428 + 20.0 0.000 Intergenic Intergenic -635433 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr16-898 chr16 4175951 4176161 + 20.0 0.000 Intergenic Intergenic -59614 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr6-352 chr6 1555008 1555218 + 20.0 0.000 Intergenic CpG -50418 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript ncRNA chr2-318 chr2 240560284 240560494 + 20.0 0.000 5' UTR (NM_001370465, exon 1 of 2) 5' UTR (NM_001370465, exon 1 of 2) 335 NM_001033575 285193 Hs.369297 NM_001033575 ENSG00000188542 DUSP28 DUSP26|VHP dual specificity phosphatase 28 protein-coding chr12-878 chr12 57881194 57881404 + 20.0 0.000 intron (NR_148947, intron 1 of 3) intron (NR_148947, intron 1 of 3) 15183 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr9-448 chr9 6007021 6007231 + 20.0 0.000 promoter-TSS (NR_039811) promoter-TSS (NR_039811) -700 NR_039811 100616288 NR_039811 ENSG00000263575 MIR4665 mir-4665 microRNA 4665 ncRNA chr12-379 chr12 123969337 123969547 + 20.0 0.000 intron (NM_001304958, intron 1 of 5) intron (NM_001304958, intron 1 of 5) 2617 NM_001304959 80212 Hs.114111 NM_025140 ENSG00000119242 CCDC92 - coiled-coil domain containing 92 protein-coding chr3-1240 chr3 134847075 134847285 + 20.0 0.000 intron (NM_004441, intron 1 of 15) intron (NM_004441, intron 1 of 15) 51920 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr17-1892 chr17 61103365 61103575 + 20.0 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 264234 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr17-895 chr17 55635374 55635584 + 20.0 0.000 Intergenic Intergenic 87385 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr11-1108 chr11 111324484 111324694 + 20.0 0.000 Intergenic Intergenic -19541 NM_001302644 399948 Hs.729225 NM_207429 COLCA1 C11orf92|CASC12|LOH11CR1F colorectal cancer associated 1 protein-coding chr11-1847 chr11 93370329 93370539 + 20.0 0.000 intron (NM_181645, intron 6 of 13) intron (NM_181645, intron 6 of 13) 39717 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr17-1037 chr17 66221860 66222070 + 20.0 0.000 intron (NM_000042, intron 4 of 7) MER5A1|DNA|hAT-Charlie 7450 NM_000042 350 Hs.445358 NM_000042 ENSG00000091583 APOH B2G1|B2GP1|BG apolipoprotein H protein-coding chr6-462 chr6 16514350 16514560 + 20.0 0.000 intron (NM_000332, intron 6 of 8) intron (NM_000332, intron 6 of 8) 245729 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr7-1368 chr7 106840355 106840565 + 20.0 0.000 Intergenic Intergenic -24822 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr6-623 chr6 36533437 36533647 + 19.9 0.000 intron (NM_007271, intron 2 of 13) intron (NM_007271, intron 2 of 13) 13937 NM_001305102 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr18-495 chr18 21116042 21116252 + 19.9 0.000 Intergenic Intergenic -4334 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr21-72 chr21 41727098 41727308 + 19.9 0.000 Intergenic Intergenic 10767 NR_024028 54089 Hs.98186 NR_024028 ENSG00000232401 LINC00112 C21orf22|NCRNA00112 long intergenic non-protein coding RNA 112 ncRNA chr8-394 chr8 102864307 102864517 + 19.9 0.000 promoter-TSS (NM_148174) promoter-TSS (NM_148174) 141 NR_126339 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA chr15-610 chr15 70833991 70834201 + 19.9 0.000 intron (NM_018357, intron 2 of 2) intron (NM_018357, intron 2 of 2) -19143 NM_001284357 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr4-567 chr4 151226244 151226454 + 19.9 0.000 promoter-TSS (NM_001128923) promoter-TSS (NM_001128923) 71 NM_001128923 152503 Hs.744983 NM_001009555 ENSG00000109686 SH3D19 EBP|EVE1|Eve-1|Kryn|SH3P19 SH3 domain containing 19 protein-coding chr11-619 chr11 61922565 61922775 + 19.9 0.000 Intergenic Intergenic -2386 NM_001271686 5866 Hs.13759 NM_013401 ENSG00000167994 RAB3IL1 GRAB RAB3A interacting protein like 1 protein-coding chr4-857 chr4 76753204 76753414 + 19.9 0.000 intron (NM_020859, intron 6 of 10) intron (NM_020859, intron 6 of 10) 144835 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr3-1770 chr3 5317573 5317783 + 19.9 0.000 Intergenic Intergenic -67423 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr9-965 chr9 115059177 115059387 + 19.9 0.000 intron (NM_002160, intron 14 of 27) intron (NM_002160, intron 14 of 27) 58875 NM_002160 3371 Hs.143250 NM_002160 ENSG00000041982 TNC 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C tenascin C protein-coding chr3-1237 chr3 127655660 127655870 + 19.9 0.000 intron (NM_015720, intron 2 of 7) L2|LINE|L2 -17173 NR_033429 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr3-807 chr3 24521398 24521608 + 19.9 0.000 Intergenic CpG -25795 NM_001354708 7068 Hs.187861 NM_000461 ENSG00000151090 THRB C-ERBA-2|C-ERBA-BETA|ERBA2|GRTH|NR1A2|PRTH|THR1|THRB1|THRB2 thyroid hormone receptor beta protein-coding chr13-474 chr13 46354828 46355038 + 19.9 0.000 intron (NM_025113, intron 10 of 14) intron (NM_025113, intron 10 of 14) 32319 NM_001286764 80183 Hs.98117 NM_025113 ENSG00000102445 RUBCNL C13orf18|KIAA0226L|PACER rubicon like autophagy enhancer protein-coding chr18-529 chr18 74798426 74798636 + 19.9 0.000 intron (NM_017757, intron 3 of 7) intron (NM_017757, intron 3 of 7) 167568 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr11-927 chr11 27282280 27282490 + 19.9 0.000 Intergenic Intergenic -62272 NR_125767 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr8-1389 chr8 25192981 25193191 + 19.9 0.000 intron (NM_024940, intron 1 of 51) Tigger17a|DNA|TcMar-Tigger 8397 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr19-776 chr19 10602179 10602389 + 19.9 0.000 promoter-TSS (NM_001145056) promoter-TSS (NM_001145056) -171 NM_001145056 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr2-1983 chr2 31937817 31938027 + 19.9 0.000 intron (NR_126032, intron 2 of 6) intron (NR_126032, intron 2 of 6) 72742 NM_001137602 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding chr16-1282 chr16 70404280 70404490 + 19.9 0.000 intron (NM_006927, intron 1 of 6) L2|LINE|L2 34715 NM_006927 6483 Hs.368611 NM_006927 ENSG00000157350 ST3GAL2 Gal-NAc6S|SIAT4B|ST3GALII|ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding chr11-585 chr11 57322542 57322752 + 19.9 0.000 intron (NM_033396, intron 1 of 11) intron (NM_033396, intron 1 of 11) 2305 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr14-313 chr14 91244591 91244801 + 19.9 0.000 promoter-TSS (NM_001177676) promoter-TSS (NM_001177676) 8 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr13-489 chr13 111219366 111219576 + 19.9 0.000 intron (NM_001330597, intron 5 of 18) L1MB3|LINE|L1 16411 NM_001320853 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr17-1747 chr17 2650823 2651033 + 19.9 0.000 intron (NM_000430, intron 2 of 10) intron (NM_000430, intron 2 of 10) 41991 NR_106834 102465465 NR_106834 ENSG00000273606 MIR6776 hsa-mir-6776 microRNA 6776 ncRNA chr7-385 chr7 149090727 149090937 + 19.9 0.000 promoter-TSS (NM_152411) promoter-TSS (NM_152411) -114 NM_152411 136051 Hs.729572 NM_152411 ENSG00000197362 ZNF786 - zinc finger protein 786 protein-coding chr16-1273 chr16 66490987 66491197 + 19.9 0.000 intron (NM_001197224, intron 4 of 4) intron (NM_001197224, intron 4 of 4) -14690 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr11-374 chr11 2390835 2391045 + 19.9 0.000 intron (NM_004356, intron 2 of 7) G-rich|Low_complexity|Low_complexity -9810 NM_005706 10078 Hs.523424 NM_005706 ENSG00000184281 TSSC4 - tumor suppressing subtransferable candidate 4 protein-coding chr6-717 chr6 105676150 105676360 + 19.9 0.000 Intergenic Intergenic -273173 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr6-441 chr6 169328566 169328776 + 19.9 0.000 Intergenic Intergenic -74557 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr11-1005 chr11 12159612 12159822 + 19.9 0.000 intron (NR_144417, intron 2 of 26) intron (NR_144417, intron 2 of 26) -2362 NM_001282666 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr18-205 chr18 58268815 58269025 + 19.9 0.000 intron (NM_001144965, intron 5 of 30) intron (NM_001144965, intron 5 of 30) 47349 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr4-848 chr4 26397100 26397310 + 19.9 0.000 intron (NM_203284, intron 3 of 11) intron (NM_203284, intron 3 of 11) 75977 NM_001363577 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr14-359 chr14 72558836 72559046 + 19.9 0.000 intron (NR_135235, intron 18 of 18) intron (NR_135235, intron 18 of 18) 42121 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr7-853 chr7 42945915 42946125 + 19.9 0.000 Intergenic MER107|DNA|hAT-Charlie 13644 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr4-738 chr4 74934377 74934587 + 19.9 0.000 intron (NM_015393, intron 1 of 3) CpG 1366 NM_015393 25849 Hs.105460 NM_015393 ENSG00000169116 PARM1 Cipar1|DKFZP564O0823|PARM-1|WSC4 prostate androgen-regulated mucin-like protein 1 protein-coding chr13-319 chr13 110330398 110330608 + 19.9 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) -10455 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr2-436 chr2 46542464 46542674 + 19.9 0.000 promoter-TSS (NM_001371281) promoter-TSS (NM_001371281) 8 NM_001318063 90423 Hs.437691 NM_080653 ENSG00000250565 ATP6V1E2 ATP6E1|ATP6EL2|ATP6V1EL2|VMA4 ATPase H+ transporting V1 subunit E2 protein-coding chr12-1305 chr12 3097494 3097704 + 19.9 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 20220 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr10-1098 chr10 72727206 72727416 + 19.9 0.000 intron (NR_073062, intron 3 of 9) intron (NR_073062, intron 3 of 9) 6282 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr8-643 chr8 86039675 86039885 + 19.9 0.000 Intergenic Intergenic 29888 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr19-675 chr19 11138694 11138904 + 19.9 0.000 Intergenic Intergenic 16983 NM_001317033 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr3-1203 chr3 29335618 29335828 + 19.9 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 54411 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr2-1000 chr2 200864696 200864906 + 19.9 0.000 promoter-TSS (NM_001162407) promoter-TSS (NM_001162407) -143 NM_004071 1195 Hs.433732 NM_004071 ENSG00000013441 CLK1 CLK|CLK/STY|STY CDC like kinase 1 protein-coding chr3-1129 chr3 4596756 4596966 + 19.9 0.000 intron (NM_001168272, intron 4 of 60) intron (NM_001168272, intron 4 of 60) 103513 NM_002222 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr4-854 chr4 73661613 73661823 + 19.9 0.000 Intergenic Intergenic -41087 NM_001270392 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr1-1469 chr1 36351393 36351603 + 19.9 0.000 intron (NM_001282546, intron 6 of 10) intron (NM_001282546, intron 6 of 10) -27344 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr2-1232 chr2 46645778 46645988 + 19.9 0.000 Intergenic Intergenic 28668 NM_014171 9419 Hs.133998 NM_014171 ENSG00000119878 CRIPT HSPC139|SSMDF CXXC repeat containing interactor of PDZ3 domain protein-coding chr16-837 chr16 86586446 86586656 + 19.9 0.000 Intergenic Intergenic 8042 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr16-559 chr16 75320019 75320229 + 19.9 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) -52117 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr11-741 chr11 61917586 61917796 + 19.9 0.000 promoter-TSS (NM_013401) promoter-TSS (NM_013401) -125 NM_013401 5866 Hs.13759 NM_013401 ENSG00000167994 RAB3IL1 GRAB RAB3A interacting protein like 1 protein-coding chr10-945 chr10 28842458 28842668 + 19.9 0.000 Intergenic Intergenic -3845 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr6-1430 chr6 152552607 152552817 + 19.9 0.000 intron (NM_182961, intron 3 of 145) intron (NM_182961, intron 3 of 145) 84139 NM_033071 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr8-1034 chr8 48370227 48370437 + 19.9 0.000 Intergenic L1MD2|LINE|L1 -181235 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chrX-236 chrX 53726961 53727171 + 19.9 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -40347 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr17-928 chr17 63478904 63479114 + 19.9 0.000 exon (NM_000789, exon 3 of 25) exon (NM_000789, exon 3 of 25) 1948 NM_000789 1636 Hs.298469 NM_000789 ENSG00000159640 ACE ACE1|CD143|DCP|DCP1 angiotensin I converting enzyme protein-coding chr1-1024 chr1 231338053 231338263 + 19.9 0.000 promoter-TSS (NM_175876) promoter-TSS (NM_175876) -135 NM_001261462 83932 Hs.554892 NM_032018 ENSG00000010072 SPRTN C1orf124|DVC1|PRO4323|spartan SprT-like N-terminal domain protein-coding chr14-679 chr14 74867923 74868133 + 19.9 0.000 Intergenic Intergenic -4194 NM_001080408 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding chr3-992 chr3 27431243 27431453 + 19.9 0.000 non-coding (NR_135544, exon 7 of 25) non-coding (NR_135544, exon 7 of 25) 25430 NM_003615 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr2-1249 chr2 238963140 238963350 + 19.9 0.000 Intergenic Intergenic -36976 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr11-1375 chr11 82695799 82696009 + 19.9 0.000 Intergenic Intergenic 37960 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr2-2008 chr2 70222428 70222638 + 19.9 0.000 intron (NR_147232, intron 5 of 10) intron (NR_147232, intron 5 of 10) 26095 NM_001351515 7072 Hs.413123 NM_022037 ENSG00000116001 TIA1 TIA-1|WDM TIA1 cytotoxic granule associated RNA binding protein protein-coding chr7-727 chr7 26667686 26667896 + 19.9 0.000 3' UTR (NM_001303468, exon 13 of 13) 3' UTR (NM_001303468, exon 13 of 13) 29920 NR_161201 285941 Hs.413394 NR_161201 C7orf71 - chromosome 7 open reading frame 71 ncRNA chr10-538 chr10 110865512 110865722 + 19.9 0.000 Intergenic Intergenic 5287 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr6-357 chr6 77467237 77467447 + 19.9 0.000 Intergenic Intergenic -3320 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr19-349 chr19 46717176 46717386 + 19.9 0.000 promoter-TSS (NM_001079880) promoter-TSS (NM_001079880) -154 NM_001079880 25865 Hs.466987 NM_016457 ENSG00000105287 PRKD2 HSPC187|PKD2|nPKC-D2 protein kinase D2 protein-coding chr10-414 chr10 23095413 23095623 + 19.9 0.000 promoter-TSS (NM_012228) promoter-TSS (NM_012228) -61 NM_012228 22921 Hs.461420 NM_012228 ENSG00000148450 MSRB2 CBS-1|CBS1|CGI-131|MSRB|PILB methionine sulfoxide reductase B2 protein-coding chr12-1275 chr12 79983594 79983804 + 19.9 0.000 Intergenic Intergenic -48244 NM_001244990 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr20-209 chr20 16573354 16573564 + 19.9 0.000 promoter-TSS (NM_001199865) promoter-TSS (NM_001199865) -11 NM_024704 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr9-1337 chr9 108272168 108272378 + 19.9 0.000 Intergenic Intergenic 583713 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr9-913 chr9 118929380 118929590 + 19.9 0.000 Intergenic MER63B|DNA|hAT-Blackjack 249814 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr7-574 chr7 47291566 47291776 + 19.9 0.000 intron (NM_022748, intron 27 of 30) L3b|LINE|CR1 173132 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr5-911 chr5 79562420 79562630 + 19.9 0.000 Intergenic Intergenic -48391 NM_004272 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr2-1711 chr2 201905104 201905314 + 19.9 0.000 Intergenic L2c|LINE|L2 98630 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr2-1625 chr2 237141533 237141743 + 19.9 0.000 Intergenic Intergenic 55749 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr3-928 chr3 58175387 58175597 + 19.9 0.000 Intergenic Intergenic -4857 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr8-474 chr8 51395003 51395213 + 19.9 0.000 intron (NM_144651, intron 17 of 22) Arthur1|DNA|hAT-Tip100 414337 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr10-1432 chr10 29689146 29689356 + 19.9 0.000 intron (NM_001323599, intron 1 of 38) MIR3|SINE|MIR 46550 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr9-623 chr9 129617212 129617422 + 19.9 0.000 intron (NM_199350, intron 3 of 6) intron (NM_199350, intron 3 of 6) -2896 NM_001286797 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr8-414 chr8 123058435 123058645 + 19.9 0.000 Intergenic Intergenic -14167 NM_001330606 93594 Hs.492716 NM_145647 ENSG00000156787 TBC1D31 Gm85|WDR67 TBC1 domain family member 31 protein-coding chr6-853 chr6 14165143 14165353 + 19.9 0.000 Intergenic Intergenic 47476 NM_004233 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr15-407 chr15 94120020 94120230 + 19.9 0.000 Intergenic Intergenic -12187 NR_120320 101927112 Hs.134687 NR_120320 ENSG00000259724 LINC01581 - long intergenic non-protein coding RNA 1581 ncRNA chr7-841 chr7 4713253 4713463 + 19.9 0.000 intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) 31063 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr3-957 chr3 47097231 47097441 + 19.9 0.000 intron (NR_146158, intron 9 of 21) intron (NR_146158, intron 9 of 21) 66641 NM_014159 29072 Hs.517941 NM_012271 ENSG00000181555 SETD2 HBP231|HIF-1|HIP-1|HSPC069|HYPB|KMT3A|LLS|SET2|p231HBP SET domain containing 2, histone lysine methyltransferase protein-coding chr1-1407 chr1 246492662 246492872 + 19.9 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 14512 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr11-747 chr11 76617590 76617800 + 19.9 0.000 Intergenic Intergenic 52243 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr11-1341 chr11 5234479 5234689 + 19.9 0.000 promoter-TSS (NM_000519) promoter-TSS (NM_000519) -101 NM_000519 3045 Hs.699280 NM_000519 ENSG00000223609 HBD - hemoglobin subunit delta protein-coding chr11-527 chr11 11871547 11871757 + 19.9 0.000 intron (NM_017944, intron 1 of 26) L1MD1|LINE|L1 30229 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr2-1027 chr2 29108274 29108484 + 19.9 0.000 intron (NM_001287528, intron 1 of 14) MER44B|DNA|TcMar-Tigger -6499 NR_109844 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr3-1788 chr3 25354187 25354397 + 19.9 0.000 intron (NM_001290300, intron 1 of 7) intron (NM_001290300, intron 1 of 7) 13490 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr3-275 chr3 182980315 182980525 + 19.9 0.000 intron (NM_001308101, intron 1 of 6) CpG 118 NM_020640 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr21-256 chr21 36255748 36255958 + 19.9 0.000 intron (NM_005128, intron 23 of 36) intron (NM_005128, intron 23 of 36) -64336 NM_001320446 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr7-476 chr7 130901252 130901462 + 19.9 0.000 intron (NR_110472, intron 2 of 3) (TGCTCCC)n|Simple_repeat|Simple_repeat 11953 NR_110473 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr5-681 chr5 120616049 120616259 + 19.9 0.000 intron (NM_001308088, intron 1 of 3) L2c|LINE|L2 84690 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr15-538 chr15 78306217 78306427 + 19.9 0.000 Intergenic Intergenic -6713 NM_001303247 80349 Hs.513055 NM_025234 ENSG00000140395 WDR61 REC14|SKI8 WD repeat domain 61 protein-coding chr2-2067 chr2 200397818 200398028 + 19.9 0.000 intron (NM_001100423, intron 3 of 12) LTR16B|LTR|ERVL 88973 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr17-1453 chr17 41982517 41982727 + 19.9 0.000 intron (NM_003315, intron 10 of 13) intron (NM_003315, intron 10 of 13) 14825 NM_001330216 1267 Hs.273621 NM_033133 ENSG00000173786 CNP CNP1 2',3'-cyclic nucleotide 3' phosphodiesterase protein-coding chr1-4021 chr1 183051650 183051860 + 19.9 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 28335 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr19-997 chr19 46662082 46662292 + 19.9 0.000 non-coding (NR_040041, exon 1 of 3) non-coding (NR_040041, exon 1 of 3) 709 NR_040041 100506068 Hs.434327 NR_040041 ENSG00000245598 DACT3-AS1 - DACT3 antisense RNA 1 ncRNA chr9-854 chr9 16505208 16505418 + 19.9 0.000 intron (NM_001317939, intron 4 of 6) intron (NM_001317939, intron 4 of 6) -221501 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr1-1826 chr1 234657409 234657619 + 19.9 0.000 intron (NR_125944, intron 3 of 3) intron (NR_125944, intron 3 of 3) 11225 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr4-749 chr4 153137235 153137445 + 19.9 0.000 Intergenic Intergenic -14994 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr4-1099 chr4 188941861 188942071 + 19.9 0.000 Intergenic Intergenic 165309 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr1-2665 chr1 183784395 183784605 + 19.9 0.000 intron (NM_001297669, intron 3 of 18) intron (NM_001297669, intron 3 of 18) -20620 NM_001297671 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr15-562 chr15 71313910 71314120 + 19.9 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -124956 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr11-1379 chr11 103384672 103384882 + 19.9 0.000 intron (NM_001377, intron 83 of 88) L1MEd|LINE|L1 275351 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr13-351 chr13 20567167 20567377 + 19.9 0.000 intron (NR_148465, intron 1 of 20) CpG 115 NR_134653 8100 Hs.187376 NM_006531 ENSG00000032742 IFT88 D13S1056E|DAF19|TG737|TTC10|hTg737 intraflagellar transport 88 protein-coding chr5-956 chr5 135247014 135247224 + 19.9 0.000 intron (NR_037895, intron 2 of 3) intron (NR_037895, intron 2 of 3) 1058 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr14-388 chr14 90409443 90409653 + 19.9 0.000 Intergenic Intergenic 11298 NM_001363670 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAM2|CAM3|CAMB|CAMC|CAMI|CAMIII|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr11-596 chr11 134037118 134037328 + 19.9 0.000 intron (NR_027276, intron 1 of 2) CpG 4951 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LINC02731 - long intergenic non-protein coding RNA 2731 ncRNA chr17-890 chr17 42423374 42423584 + 19.9 0.000 promoter-TSS (NM_012232) promoter-TSS (NM_012232) -223 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 CAVIN1 CAVIN|CGL4|FKSG13|PTRF|cavin-1 caveolae associated protein 1 protein-coding chr8-598 chr8 100623457 100623667 + 19.9 0.000 intron (NM_152628, intron 4 of 13) intron (NM_152628, intron 4 of 13) -5157 NM_001363720 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr3-965 chr3 81485504 81485714 + 19.9 0.000 Intergenic Intergenic 276036 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr10-1590 chr10 29649673 29649883 + 19.9 0.000 intron (NM_001323599, intron 3 of 38) MSTD|LTR|ERVL-MaLR -14807 NM_021738 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr3-786 chr3 114506990 114507200 + 19.9 0.000 intron (NR_121662, intron 3 of 6) intron (NR_121662, intron 3 of 6) 53502 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr6-1638 chr6 116666741 116666951 + 19.8 0.000 exon (NM_001361189, exon 2 of 10) exon (NM_001361189, exon 2 of 10) 1920 NM_145062 221302 Hs.29857 NM_145062 ENSG00000153975 ZUP1 C6orf113|DUB|ZUFSP zinc finger containing ubiquitin peptidase 1 protein-coding chr3-2203 chr3 16587548 16587758 + 19.8 0.000 3' UTR (NM_001190811, exon 11 of 11) 3' UTR (NM_001190811, exon 11 of 11) 17137 NM_001190811 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr19-1874 chr19 19489314 19489524 + 19.8 0.000 intron (NM_001359631, intron 2 of 10) intron (NM_001359631, intron 2 of 10) 26129 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr10-1110 chr10 96665438 96665648 + 19.8 0.000 intron (NM_152309, intron 2 of 16) intron (NM_152309, intron 2 of 16) 54971 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr9-1000 chr9 75616848 75617058 + 19.8 0.000 Intergenic Intergenic -273691 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr7-1440 chr7 55066571 55066781 + 19.8 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -43163 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr11-624 chr11 69641082 69641292 + 19.8 0.000 promoter-TSS (NM_053056) promoter-TSS (NM_053056) 82 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr20-368 chr20 45363221 45363431 + 19.8 0.000 intron (NM_001099791, intron 1 of 3) CpG 157 NR_003189 767557 Hs.730643 NR_003189 ENSG00000254806 SYS1-DBNDD2 C20orf169-DBNDD2 SYS1-DBNDD2 readthrough (NMD candidate) ncRNA chr8-761 chr8 130649714 130649924 + 19.8 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -206145 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr2-2544 chr2 206524833 206525043 + 19.8 0.000 intron (NM_003812, intron 3 of 25) intron (NM_003812, intron 3 of 25) 81406 NM_003812 8745 Hs.370287 NM_003812 ENSG00000114948 ADAM23 MDC-3|MDC3 ADAM metallopeptidase domain 23 protein-coding chr15-535 chr15 71011723 71011933 + 19.8 0.000 intron (NM_017691, intron 13 of 15) intron (NM_017691, intron 13 of 15) 119385 NM_001363732 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr10-1495 chr10 5559768 5559978 + 19.8 0.000 Intergenic Intergenic -33627 NR_120496 100132159 Hs.239600 NR_120496 CALML3-AS1 - CALML3 antisense RNA 1 ncRNA chr7-689 chr7 155003186 155003396 + 19.8 0.000 promoter-TSS (NR_028090) promoter-TSS (NR_028090) -142 NR_028090 202781 Hs.193172 NR_028090 ENSG00000273344 PAXIP1-AS1 - PAXIP1 antisense RNA 1 (head to head) ncRNA chr1-1322 chr1 155140318 155140528 + 19.8 0.000 promoter-TSS (NM_018973) promoter-TSS (NM_018973) -16 NM_018973 54344 Hs.110477 NM_018973 ENSG00000179085 DPM3 CDG1O dolichyl-phosphate mannosyltransferase subunit 3, regulatory protein-coding chr1-879 chr1 16513901 16514111 + 19.8 0.000 TTS (NR_004400) TTS (NR_004400) 279 NR_004408 26869 NR_004408 ENSG00000207513 RNU1-3 HSD4|RNU1G3 RNA, U1 small nuclear 3 snRNA chr7-459 chr7 6448408 6448618 + 19.8 0.000 promoter-TSS (NM_139179) promoter-TSS (NM_139179) -501 NM_001142936 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr11-1256 chr11 117181341 117181551 + 19.8 0.000 exon (NM_001040455, exon 2 of 26) exon (NM_001040455, exon 2 of 26) 2703 NM_001040455 51092 Hs.712144 NM_015996 ENSG00000149577 SIDT2 CGI-40 SID1 transmembrane family member 2 protein-coding chr10-645 chr10 14686489 14686699 + 19.8 0.000 intron (NM_031453, intron 1 of 4) intron (NM_031453, intron 1 of 4) -82193 NM_001282697 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr1-1089 chr1 53328151 53328361 + 19.8 0.000 promoter-TSS (NR_131923) promoter-TSS (NR_131923) 23 NR_131923 105378732 Hs.118609 NR_131923 ENSG00000225675 LINC01771 - long intergenic non-protein coding RNA 1771 ncRNA chr7-764 chr7 23600392 23600602 + 19.8 0.000 intron (NM_138771, intron 2 of 3) intron (NM_138771, intron 2 of 3) 3115 NM_138771 90693 Hs.232296 NM_138771 ENSG00000169193 CCDC126 - coiled-coil domain containing 126 protein-coding chr18-149 chr18 62881836 62882046 + 19.8 0.000 intron (NM_194449, intron 4 of 16) intron (NM_194449, intron 4 of 16) 166400 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr8-809 chr8 132143192 132143402 + 19.8 0.000 intron (NM_001204824, intron 9 of 14) intron (NM_001204824, intron 9 of 14) -38032 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr10-579 chr10 13713110 13713320 + 19.8 0.000 intron (NM_001318336, intron 11 of 23) intron (NM_001318336, intron 11 of 23) -5648 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr7-1769 chr7 66146793 66147003 + 19.8 0.000 intron (NR_024548, intron 6 of 6) intron (NR_024548, intron 6 of 6) 32051 NM_014478 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr14-427 chr14 103828497 103828707 + 19.8 0.000 intron (NM_015316, intron 1 of 16) intron (NM_015316, intron 1 of 16) 18973 NM_015316 23368 Hs.709297 NM_015316 ENSG00000088808 PPP1R13B ASPP1|p53BP2-like|p85 protein phosphatase 1 regulatory subunit 13B protein-coding chr11-1517 chr11 91104348 91104558 + 19.8 0.000 Intergenic Intergenic -235251 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr8-1169 chr8 26304956 26305166 + 19.8 0.000 intron (NM_001177591, intron 2 of 9) L1MB2|LINE|L1 11845 NM_001177591 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr6-1036 chr6 157184353 157184563 + 19.8 0.000 intron (NM_020732, intron 13 of 19) intron (NM_020732, intron 13 of 19) 139801 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr4-871 chr4 127048408 127048618 + 19.8 0.000 Intergenic L2c|LINE|L2 -584444 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr1-1650 chr1 224593136 224593346 + 19.8 0.000 intron (NR_136294, intron 4 of 8) AluJb|SINE|Alu -23076 NR_136287 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr10-627 chr10 30820472 30820682 + 19.8 0.000 Intergenic Intergenic 97358 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr1-2317 chr1 94983354 94983564 + 19.8 0.000 intron (NM_144988, intron 3 of 3) intron (NM_144988, intron 3 of 3) 55431 NR_033998 729970 Hs.297988 NR_033998 ENSG00000235501 LOC729970 - hCG2028352-like ncRNA chr8-671 chr8 58595999 58596209 + 19.8 0.000 intron (NM_001144772, intron 21 of 30) intron (NM_001144772, intron 21 of 30) 42843 NM_005625 6386 Hs.200804 NM_005625 ENSG00000137575 SDCBP MDA-9|MDA9|ST1|SYCL|TACIP18 syndecan binding protein protein-coding chr16-724 chr16 66650932 66651142 + 19.8 0.000 intron (NM_181521, intron 1 of 3) intron (NM_181521, intron 1 of 3) 45706 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr16-799 chr16 87894084 87894294 + 19.8 0.000 intron (NR_159798, intron 5 of 7) AluYj4|SINE|Alu -24682 NM_003486 8140 Hs.513797 NM_003486 ENSG00000103257 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16 solute carrier family 7 member 5 protein-coding GL000225.1-4 GL000225.1 120536 120746 + 19.8 0.000 NA NA NA NA chr4-822 chr4 139902765 139902975 + 19.8 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -225145 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr14-882 chr14 100747064 100747274 + 19.8 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 20277 NM_001317172 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chr13-286 chr13 46866334 46866544 + 19.8 0.000 intron (NM_001165947, intron 2 of 2) intron (NM_001165947, intron 2 of 2) 14299 NR_103752 100874082 Hs.569281 NR_046612 ENSG00000224517 HTR2A-AS1 - HTR2A antisense RNA 1 ncRNA chr3-663 chr3 148991349 148991559 + 19.8 0.000 promoter-TSS (NM_001184721) promoter-TSS (NM_001184721) 46 NM_001184720 2992 Hs.477892 NM_004130 ENSG00000163754 GYG1 GSD15|GYG glycogenin 1 protein-coding chr5-470 chr5 108461792 108462002 + 19.8 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -79799 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr9-535 chr9 112333697 112333907 + 19.8 0.000 promoter-TSS (NM_005156) promoter-TSS (NM_005156) -138 NM_001163790 9991 Hs.269988 NM_005156 ENSG00000119314 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding chr11-1081 chr11 118792835 118793045 + 19.8 0.000 Intergenic MER89|LTR|ERV1 -1776 NM_004397 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr1-1862 chr1 66464850 66465060 + 19.8 0.000 Intergenic Intergenic -68638 NM_001308203 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr17-1044 chr17 81393931 81394141 + 19.8 0.000 Intergenic CpG -5338 NM_001291324 57597 Hs.514580 NM_024696 ENSG00000266074 BAHCC1 BAHD2 BAH domain and coiled-coil containing 1 protein-coding chr12-276 chr12 98593553 98593763 + 19.8 0.000 promoter-TSS (NM_002635) promoter-TSS (NM_002635) -28 NM_002635 5250 Hs.290404 NM_002635 ENSG00000075415 SLC25A3 OK/SW-cl.48|PHC|PTP solute carrier family 25 member 3 protein-coding chr20-250 chr20 23421545 23421755 + 19.8 0.000 promoter-TSS (NM_022080) promoter-TSS (NM_022080) -131 NM_022080 63908 Hs.269471 NM_022080 ENSG00000125814 NAPB SNAP-BETA|SNAPB NSF attachment protein beta protein-coding chr1-1225 chr1 15179009 15179219 + 19.8 0.000 intron (NR_135082, intron 1 of 2) intron (NR_135082, intron 1 of 2) -7490 NM_001278501 727684 Hs.667584 NM_001278501 C1orf195 - chromosome 1 open reading frame 195 protein-coding chr5-835 chr5 50744942 50745152 + 19.8 0.000 intron (NM_024615, intron 2 of 25) intron (NM_024615, intron 2 of 25) 77633 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr12-1311 chr12 12704676 12704886 + 19.8 0.000 Intergenic Intergenic -8598 NM_006143 2842 Hs.657862 NM_006143 ENSG00000183150 GPR19 - G protein-coupled receptor 19 protein-coding chr7-1156 chr7 105932761 105932971 + 19.8 0.000 Intergenic Intergenic -30398 NM_152750 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr16-514 chr16 30805551 30805761 + 19.8 0.000 Intergenic CpG -18451 NM_001345970 23361 Hs.301094 NM_001080417 ENSG00000102870 ZNF629 ZNF|ZNF65 zinc finger protein 629 protein-coding chr19-1141 chr19 18833131 18833341 + 19.8 0.000 intron (NM_002911, intron 1 of 23) intron (NM_002911, intron 1 of 23) 1277 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr4-467 chr4 6876953 6877163 + 19.8 0.000 intron (NM_001100590, intron 8 of 8) intron (NM_001100590, intron 8 of 8) -32386 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr1-3194 chr1 147264575 147264785 + 19.8 0.000 intron (NM_001348462, intron 7 of 22) intron (NM_001348462, intron 7 of 22) 21538 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr20-103 chr20 40689210 40689420 + 19.8 0.000 promoter-TSS (NM_005461) promoter-TSS (NM_005461) -79 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr20-267 chr20 31879579 31879789 + 19.8 0.000 promoter-TSS (NM_001367620) promoter-TSS (NM_001367620) -133 NR_160276 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr13-468 chr13 41138005 41138215 + 19.8 0.000 intron (NR_120423, intron 1 of 3) MER21A|LTR|ERVL 5182 NR_120423 101929140 Hs.663088 NR_120423 ENSG00000278390 LOC101929140 - uncharacterized LOC101929140 ncRNA chr1-1690 chr1 168261597 168261807 + 19.8 0.000 Intergenic L2c|LINE|L2 -14272 NR_026844 84832 Hs.537067 NR_026844 ENSG00000214262 ANKRD36BP1 ANKRD26L1|ANKRD36BL1 ankyrin repeat domain 36B pseudogene 1 pseudo chr1-1890 chr1 171127549 171127759 + 19.8 0.000 Intergenic Intergenic -10086 NR_002601 388714 Hs.448988 NR_002601 ENSG00000117507 FMO6P FMO6 flavin containing dimethylaniline monoxygenase 6, pseudogene pseudo chr16-1162 chr16 70553707 70553917 + 19.8 0.000 intron (NM_012426, intron 11 of 25) intron (NM_012426, intron 11 of 25) 15807 NR_003079 692214 NR_003079 ENSG00000221066 SNORD111 HBII-82 small nucleolar RNA, C/D box 111 snoRNA chr8-1141 chr8 133674316 133674526 + 19.8 0.000 intron (NR_134462, intron 1 of 2) intron (NR_134462, intron 1 of 2) 9645 NR_134462 105375773 Hs.445172 NR_134462 LOC105375773 - uncharacterized LOC105375773 ncRNA chr15-311 chr15 79896783 79896993 + 19.8 0.000 exon (NM_006441, exon 1 of 3) exon (NM_006441, exon 1 of 3) 109 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr16-741 chr16 56607384 56607594 + 19.8 0.000 Intergenic Intergenic -1095 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT-2|MT-II|MT2 metallothionein 2A protein-coding chr1-1495 chr1 234863077 234863287 + 19.8 0.000 Intergenic Intergenic 100817 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr1-3075 chr1 20792357 20792567 + 19.8 0.000 Intergenic Intergenic -5774 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr12-494 chr12 123601867 123602077 + 19.8 0.000 promoter-TSS (NR_135105) promoter-TSS (NR_135105) -127 NR_135105 57696 Hs.286173 NM_020936 ENSG00000111364 DDX55 - DEAD-box helicase 55 protein-coding chr9-1149 chr9 1005175 1005385 + 19.8 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu 28625 NM_021240 58524 Hs.189174 NM_021240 ENSG00000064218 DMRT3 DMRTA3 doublesex and mab-3 related transcription factor 3 protein-coding chr1-654 chr1 108747186 108747396 + 19.8 0.000 intron (NM_007269, intron 1 of 18) intron (NM_007269, intron 1 of 18) 617 NM_007269 6814 Hs.530436 NM_007269 ENSG00000116266 STXBP3 MUNC18-3|MUNC18C|PSP|UNC-18C syntaxin binding protein 3 protein-coding chr3-1349 chr3 139972225 139972435 + 19.8 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 37145 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr9-492 chr9 95875832 95876042 + 19.8 0.000 promoter-TSS (NR_023390) promoter-TSS (NR_023390) 40 NR_023389 100128782 Hs.494549 NR_023389 ENSG00000175611 LINC00476 C9orf130|NAG11|NAG12 long intergenic non-protein coding RNA 476 ncRNA chr15-443 chr15 68277511 68277721 + 19.8 0.000 promoter-TSS (NM_015322) promoter-TSS (NM_015322) -129 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr1-2492 chr1 162141761 162141971 + 19.8 0.000 intron (NM_014697, intron 1 of 9) intron (NM_014697, intron 1 of 9) -15241 NR_039798 100616386 NR_039798 ENSG00000266144 MIR4654 mir-4654 microRNA 4654 ncRNA chr8-729 chr8 105986209 105986419 + 19.8 0.000 intron (NR_125797, intron 1 of 4) intron (NR_125797, intron 1 of 4) 74189 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr5-698 chr5 55233577 55233787 + 19.8 0.000 promoter-TSS (NM_021147) promoter-TSS (NM_021147) 35 NR_125347 10309 Hs.3041 NM_021147 ENSG00000152669 CCNO CCNU|CILD29|UDG2 cyclin O protein-coding chr4-881 chr4 176769689 176769899 + 19.8 0.000 intron (NM_005429, intron 1 of 6) MIRb|SINE|MIR 23128 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr20-384 chr20 50541000 50541210 + 19.8 0.000 intron (NM_001278618, intron 1 of 8) intron (NM_001278618, intron 1 of 8) 30722 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr6-850 chr6 7146648 7146858 + 19.8 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 38792 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr12-509 chr12 76878958 76879168 + 19.8 0.000 promoter-TSS (NM_001300965) promoter-TSS (NM_001300965) -44 NM_001321 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr7-1462 chr7 98418859 98419069 + 19.8 0.000 Intergenic Intergenic -17874 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr2-629 chr2 152466940 152467150 + 19.8 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 131871 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr1-996 chr1 11273208 11273418 + 19.8 0.000 5' UTR (NM_013319, exon 1 of 2) 5' UTR (NM_013319, exon 1 of 2) 115 NM_013319 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr3-1735 chr3 128133499 128133709 + 19.8 0.000 intron (NM_001319086, intron 1 of 9) L1MA3|LINE|L1 -9792 NM_003707 8607 Hs.272822 NM_003707 ENSG00000175792 RUVBL1 ECP-54|ECP54|INO80H|NMP 238|NMP238|PONTIN|Pontin52|RVB1|TIH1|TIP49|TIP49A RuvB like AAA ATPase 1 protein-coding chr16-766 chr16 73068966 73069176 + 19.8 0.000 Intergenic Intergenic -10050 NM_001164766 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr10-1139 chr10 47402966 47403176 + 19.8 0.000 Intergenic Intergenic -4094 NR_134500 107001062 Hs.576719 NR_134500 LOC107001062 - uncharacterized LOC107001062 ncRNA chr9-1199 chr9 115850924 115851134 + 19.8 0.000 Intergenic Intergenic 74178 NR_024032 58483 Hs.23367 NR_024032 ENSG00000204148 LINC00474 C9orf27|EST-YD1 long intergenic non-protein coding RNA 474 ncRNA chr15-299 chr15 83011498 83011708 + 19.8 0.000 promoter-TSS (NM_144597) promoter-TSS (NM_144597) 36 NR_027649 123207 Hs.352541 NM_144597 ENSG00000169609 C15orf40 - chromosome 15 open reading frame 40 protein-coding chr10-555 chr10 102115050 102115260 + 19.8 0.000 promoter-TSS (NM_003893) promoter-TSS (NM_003893) -153 NM_003893 8861 Hs.454418 NM_003893 ENSG00000198728 LDB1 CLIM-2|CLIM2|LDB-1|NLI LIM domain binding 1 protein-coding chr17-1012 chr17 14794233 14794443 + 19.8 0.000 Intergenic L2b|LINE|L2 -220467 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr12-1077 chr12 32548781 32548991 + 19.8 0.000 intron (NM_001304480, intron 1 of 16) intron (NM_001304480, intron 1 of 16) 14593 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr2-1706 chr2 189763153 189763363 + 19.8 0.000 promoter-TSS (NM_001354347) promoter-TSS (NM_001354347) -60 NM_001354347 64172 Hs.60772 NM_022353 ENSG00000128694 OSGEPL1 OSGEPL|Qri7 O-sialoglycoprotein endopeptidase like 1 protein-coding chr11-428 chr11 66070142 66070352 + 19.8 0.000 promoter-TSS (NM_018026) promoter-TSS (NM_018026) -25 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr4-412 chr4 8355967 8356177 + 19.8 0.000 Intergenic Intergenic 35896 NR_149125 105374374 Hs.145224 NR_149125 ENSG00000249145 LINC02517 - long intergenic non-protein coding RNA 2517 ncRNA chr10-421 chr10 116742685 116742895 + 19.8 0.000 promoter-TSS (NM_025015) promoter-TSS (NM_025015) -224 NM_025015 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding chr8-350 chr8 42843090 42843300 + 19.8 0.000 5' UTR (NM_199003, exon 1 of 2) 5' UTR (NM_199003, exon 1 of 2) 130 NM_018105 55145 Hs.7432 NM_018105 ENSG00000131931 THAP1 DYT6 THAP domain containing 1 protein-coding chr11-752 chr11 103609389 103609599 + 19.8 0.000 Intergenic LTR50|LTR|ERVL -240412 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr19-686 chr19 2060834 2061044 + 19.8 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -9695 NM_199054 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr2-1212 chr2 225233298 225233508 + 19.8 0.000 Intergenic Intergenic -166307 NM_001371273 chr6-899 chr6 129590731 129590941 + 19.8 0.000 intron (NM_033515, intron 12 of 14) intron (NM_033515, intron 12 of 14) 119341 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr1-2235 chr1 162021859 162022069 + 19.8 0.000 intron (NM_001347700, intron 1 of 7) intron (NM_001347700, intron 1 of 7) 2501 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr7-635 chr7 151598275 151598485 + 19.8 0.000 intron (NM_016203, intron 5 of 15) L1MA6|LINE|L1 33878 NM_024429 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr1-2346 chr1 10430743 10430953 + 19.8 0.000 promoter-TSS (NM_001243768) promoter-TSS (NM_001243768) 98 NM_001243768 100526739 Hs.412311 NM_198544 ENSG00000251503 CENPS-CORT APITD1|APITD1-CORT|CENP-S|CENPS|FAAP16|MHF1 CENPS-CORT readthrough protein-coding chr1-2392 chr1 164707080 164707290 + 19.8 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 67456 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr12-761 chr12 103929578 103929788 + 19.8 0.000 promoter-TSS (NR_037425) promoter-TSS (NR_037425) 528 NR_027249 253724 Hs.506549 NR_027249 ENSG00000214198 TTC41P GNN|GNNP tetratricopeptide repeat domain 41, pseudogene pseudo chr10-761 chr10 96991223 96991433 + 19.8 0.000 3' UTR (NM_001346516, exon 8 of 8) 3' UTR (NM_001346516, exon 8 of 8) -111428 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr19-1003 chr19 57578916 57579126 + 19.8 0.000 promoter-TSS (NM_017879) promoter-TSS (NM_017879) -94 NM_001353405 55659 Hs.247711 NM_017879 ENSG00000083817 ZNF416 - zinc finger protein 416 protein-coding chr2-746 chr2 100924681 100924891 + 19.8 0.000 intron (NM_002518, intron 2 of 20) intron (NM_002518, intron 2 of 20) 52375 NR_110213 101927142 Hs.656556 NR_110213 LOC101927142 - uncharacterized LOC101927142 ncRNA chr14-329 chr14 85533171 85533381 + 19.8 0.000 promoter-TSS (NR_144385) promoter-TSS (NR_144385) -46 NR_144385 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr11-1084 chr11 119594495 119594705 + 19.8 0.000 Intergenic HAL1|LINE|L1 134600 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr1-3322 chr1 19341633 19341843 + 19.8 0.000 intron (NM_001206541, intron 8 of 8) intron (NM_001206541, intron 8 of 8) 29412 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr6-528 chr6 17115877 17116087 + 19.8 0.000 intron (NM_001190766, intron 2 of 4) intron (NM_001190766, intron 2 of 4) 13724 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr10-704 chr10 80498723 80498933 + 19.8 0.000 intron (NM_001128309, intron 2 of 5) MIRb|SINE|MIR 30565 NM_001351271 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr5-249 chr5 149063150 149063360 + 19.8 0.000 promoter-TSS (NR_030310) promoter-TSS (NR_030310) -62 NR_122044 255187 Hs.149321 NR_122044 ENSG00000250072 SH3TC2-DT - SH3TC2 divergent transcript ncRNA chr11-983 chr11 74943054 74943264 + 19.8 0.000 intron (NM_001270380, intron 2 of 14) intron (NM_001270380, intron 2 of 14) 5932 NM_001270380 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr12-529 chr12 108562405 108562615 + 19.8 0.000 non-coding (NR_135127, exon 1 of 7) non-coding (NR_135127, exon 1 of 7) 1047 NR_135127 23479 Hs.615131 NM_014301 ENSG00000136003 ISCU 2310020H20Rik|HML|ISU2|NIFU|NIFUN|hnifU iron-sulfur cluster assembly enzyme protein-coding chr16-697 chr16 89217591 89217801 + 19.8 0.000 promoter-TSS (NM_001201407) promoter-TSS (NM_001201407) -7 NR_037705 197320 Hs.647385 NM_182531 ENSG00000170100 ZNF778 - zinc finger protein 778 protein-coding chr1-1796 chr1 102897614 102897824 + 19.8 0.000 intron (NM_001854, intron 57 of 66) intron (NM_001854, intron 57 of 66) 210777 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr13-313 chr13 42040205 42040415 + 19.8 0.000 intron (NM_001204504, intron 1 of 29) CpG 274 NM_001204504 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr18-124 chr18 24271532 24271742 + 19.8 0.000 5' UTR (NM_018030, exon 1 of 14) 5' UTR (NM_018030, exon 1 of 14) 595 NM_018030 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr12-987 chr12 104748908 104749118 + 19.8 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 157380 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr8-531 chr8 27964935 27965145 + 19.8 0.000 intron (NM_173833, intron 3 of 8) intron (NM_173833, intron 3 of 8) 27633 NM_173833 286133 Hs.591833 NM_173833 ENSG00000168079 SCARA5 NET33|Tesr scavenger receptor class A member 5 protein-coding chr1-2606 chr1 77888953 77889163 + 19.8 0.000 non-coding (NR_103535, exon 2 of 3) non-coding (NR_103535, exon 2 of 3) 481 NR_103535 374987 Hs.632414 NM_199343 ENSG00000235927 NEXN-AS1 C1orf118 NEXN antisense RNA 1 ncRNA chr4-620 chr4 183200622 183200832 + 19.8 0.000 intron (NM_024949, intron 2 of 22) MLT1F2|LTR|ERVL-MaLR 39907 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr6-1347 chr6 38267072 38267282 + 19.8 0.000 intron (NM_052893, intron 9 of 11) intron (NM_052893, intron 9 of 11) -214419 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr20-142 chr20 462426 462636 + 19.8 0.000 promoter-TSS (NM_144628) promoter-TSS (NM_144628) 2 NR_111901 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding chr17-623 chr17 31437378 31437588 + 19.8 0.000 intron (NM_032932, intron 3 of 14) intron (NM_032932, intron 3 of 14) 45808 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr3-329 chr3 125375204 125375414 + 19.8 0.000 promoter-TSS (NM_021964) promoter-TSS (NM_021964) 45 NM_001348434 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr2-1048 chr2 146246026 146246236 + 19.8 0.000 Intergenic Intergenic -340926 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr15-758 chr15 64444356 64444566 + 19.8 0.000 intron (NM_001321924, intron 11 of 12) intron (NM_001321924, intron 11 of 12) -54959 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr7-1230 chr7 131554233 131554443 + 19.8 0.000 intron (NM_001018111, intron 1 of 8) (ATC)n|Simple_repeat|Simple_repeat 2290 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr3-517 chr3 50567660 50567870 + 19.8 0.000 promoter-TSS (NM_001171740) promoter-TSS (NM_001171740) -18 NM_001171740 51161 Hs.517860 NM_016210 ENSG00000088543 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding chr10-564 chr10 14953644 14953854 + 19.8 0.000 intron (NM_001033858, intron 1 of 15) CpG 347 NM_001289079 64421 Hs.655932 NM_022487 ENSG00000152457 DCLRE1C A-SCID|DCLREC1C|RS-SCID|SCIDA|SNM1C DNA cross-link repair 1C protein-coding chr21-257 chr21 36347676 36347886 + 19.8 0.000 intron (NM_015358, intron 8 of 16) L2b|LINE|L2 27584 NM_015358 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr16-725 chr16 70735423 70735633 + 19.8 0.000 intron (NM_001351157, intron 12 of 17) intron (NM_001351157, intron 12 of 17) -19567 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr19-1743 chr19 2171173 2171383 + 19.8 0.000 intron (NM_032482, intron 1 of 27) intron (NM_032482, intron 1 of 27) 7345 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr17-860 chr17 64641503 64641713 + 19.8 0.000 intron (NM_022739, intron 1 of 18) MLT1G|LTR|ERVL-MaLR 20699 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr19-609 chr19 13764445 13764655 + 19.8 0.000 promoter-TSS (NM_032285) promoter-TSS (NM_032285) 28 NM_001031727 84245 Hs.439370 NM_032285 ENSG00000037757 MRI1 M1Pi|MRDI|MTNA|Ypr118w methylthioribose-1-phosphate isomerase 1 protein-coding chr19-988 chr19 17944403 17944613 + 19.8 0.000 TTS (NM_138442) TTS (NM_138442) -6794 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr16-1534 chr16 65029265 65029475 + 19.8 0.000 intron (NM_001797, intron 2 of 12) intron (NM_001797, intron 2 of 12) 92693 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr16-504 chr16 19521882 19522092 + 19.8 0.000 non-coding (NR_136689, exon 1 of 6) non-coding (NR_136689, exon 1 of 6) 111 NM_001324066 51573 Hs.512607 NM_016641 ENSG00000006007 GDE1 363E6.2|MIR16 glycerophosphodiester phosphodiesterase 1 protein-coding chr19-728 chr19 46625276 46625486 + 19.7 0.000 promoter-TSS (NM_000960) promoter-TSS (NM_000960) -292 NM_000960 5739 Hs.458324 NM_000960 ENSG00000160013 PTGIR IP|PRIPR prostaglandin I2 receptor protein-coding chr2-1850 chr2 224882639 224882849 + 19.7 0.000 intron (NM_001290263, intron 7 of 55) intron (NM_001290263, intron 7 of 55) 64305 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr2-245 chr2 241734430 241734640 + 19.7 0.000 promoter-TSS (NM_001287249) promoter-TSS (NM_001287249) -95 NM_001287249 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr12-1073 chr12 14644211 14644421 + 19.7 0.000 intron (NM_004963, intron 16 of 26) AluSx|SINE|Alu 52283 NM_004963 2984 Hs.524278 NM_004963 ENSG00000070019 GUCY2C DIAR6|GC-C|GUC2C|MECIL|MUCIL|STAR guanylate cyclase 2C protein-coding chr17-1907 chr17 68355181 68355391 + 19.7 0.000 intron (NM_001352899, intron 5 of 12) MIRc|SINE|MIR -58337 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr2-872 chr2 235070341 235070551 + 19.7 0.000 Intergenic Intergenic 42711 NM_001371306 chr11-721 chr11 59142578 59142788 + 19.7 0.000 promoter-TSS (NM_001142519) promoter-TSS (NM_001142519) -63 NM_001142520 63901 Hs.150651 NM_022074 ENSG00000166801 FAM111A GCLEB|KCS2 family with sequence similarity 111 member A protein-coding chr8-483 chr8 127827492 127827702 + 19.7 0.000 intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 31635 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr3-1381 chr3 53318640 53318850 + 19.7 0.000 intron (NM_001290207, intron 3 of 7) Tigger16b|DNA|TcMar-Tigger 14382 NR_145715 109617024 NR_145715 ENSG00000207109 SNORD38C - small nucleolar RNA, C/D box 38C snoRNA chr18-65 chr18 80196923 80197133 + 19.7 0.000 intron (NM_032510, intron 2 of 2) intron (NM_032510, intron 2 of 2) 49104 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr3-1542 chr3 191094151 191094361 + 19.7 0.000 Intergenic L2b|LINE|L2 -104985 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding chr7-1052 chr7 130884968 130885178 + 19.7 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) -7534 NR_029517 407024 NR_029517 ENSG00000283797 MIR29B1 MIRN29B1|miR-29b|miRNA29B1|mir-29b-1 microRNA 29b-1 ncRNA chr11-427 chr11 65497692 65497902 + 19.7 0.000 promoter-TSS (NR_002819) promoter-TSS (NR_002819) 59 NR_144568 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 ncRNA chr11-1645 chr11 106988145 106988355 + 19.7 0.000 intron (NM_001256424, intron 1 of 8) intron (NM_001256424, intron 1 of 8) 30226 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr19-1193 chr19 48107455 48107665 + 19.7 0.000 intron (NM_001159323, intron 1 of 16) LTR13|LTR|ERVK 3257 NM_003706 8605 Hs.631562 NM_003706 ENSG00000105499 PLA2G4C CPLA2-gamma phospholipase A2 group IVC protein-coding chr10-1844 chr10 48603557 48603767 + 19.7 0.000 intron (NM_001347738, intron 2 of 10) intron (NM_001347738, intron 2 of 10) 1411 NR_144642 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr9-834 chr9 127535956 127536166 + 19.7 0.000 intron (NM_001035534, intron 1 of 13) intron (NM_001035534, intron 1 of 13) 33012 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr1-1667 chr1 38986807 38987017 + 19.7 0.000 Intergenic Intergenic -4332 NM_001136275 79647 Hs.293563 NM_024595 ENSG00000174574 AKIRIN1 C1orf108|STRF2 akirin 1 protein-coding chr2-1129 chr2 33134501 33134711 + 19.7 0.000 promoter-TSS (NM_001166266) promoter-TSS (NM_001166266) 9 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr2-727 chr2 20675187 20675397 + 19.7 0.000 3' UTR (NM_182828, exon 2 of 2) 3' UTR (NM_182828, exon 2 of 2) 8148 NM_182828 151449 Hs.447688 NM_182828 ENSG00000143869 GDF7 BMP12 growth differentiation factor 7 protein-coding chr2-415 chr2 202634794 202635004 + 19.7 0.000 promoter-TSS (NM_173511) promoter-TSS (NM_173511) -70 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr11-1264 chr11 2122482 2122692 + 19.7 0.000 Intergenic Intergenic 11622 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr4-507 chr4 94995690 94995900 + 19.7 0.000 promoter-TSS (NM_001256792) promoter-TSS (NM_001256792) -437 NM_001256792 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr17-621 chr17 27353731 27353941 + 19.7 0.000 Intergenic CpG 59722 NM_015626 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding chr20-349 chr20 17651095 17651305 + 19.7 0.000 intron (NM_001042576, intron 4 of 25) intron (NM_001042576, intron 4 of 25) 31042 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr10-450 chr10 132611455 132611665 + 19.7 0.000 intron (NM_005539, intron 2 of 15) intron (NM_005539, intron 2 of 15) -69715 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr11-1027 chr11 106399152 106399362 + 19.7 0.000 Intergenic Intergenic 147850 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr11-910 chr11 72822068 72822278 + 19.7 0.000 exon (NM_033388, exon 5 of 18) exon (NM_033388, exon 5 of 18) 7762 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr4-492 chr4 610712 610922 + 19.7 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -14757 NM_000283 5158 Hs.623810 NM_000283 ENSG00000133256 PDE6B CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1 phosphodiesterase 6B protein-coding chr11-913 chr11 94973406 94973616 + 19.7 0.000 promoter-TSS (NM_018039) promoter-TSS (NM_018039) 45 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr6-673 chr6 129744675 129744885 + 19.7 0.000 Intergenic Intergenic -34603 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr12-952 chr12 79984350 79984560 + 19.7 0.000 Intergenic Intergenic -49000 NM_001244990 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr4-852 chr4 48388554 48388764 + 19.7 0.000 intron (NM_020846, intron 6 of 7) intron (NM_020846, intron 6 of 7) 47130 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr5-1028 chr5 141521251 141521461 + 19.7 0.000 intron (NM_001314007, intron 27 of 28) intron (NM_001314007, intron 27 of 28) 32115 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chrX-299 chrX 124501708 124501918 + 19.7 0.000 intron (NM_014253, intron 19 of 30) intron (NM_014253, intron 19 of 30) 155531 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr1-1326 chr1 168178765 168178975 + 19.7 0.000 promoter-TSS (NM_001031800) promoter-TSS (NM_001031800) -92 NM_001031800 261726 Hs.209431 NM_152902 ENSG00000143155 TIPRL TIP|TIP41|TIPRL1 TOR signaling pathway regulator protein-coding chr12-626 chr12 48787987 48788197 + 19.7 0.000 intron (NM_015270, intron 1 of 21) intron (NM_015270, intron 1 of 21) 997 NM_015270 112 Hs.525401 NM_015270 ENSG00000174233 ADCY6 AC6|LCCS8 adenylate cyclase 6 protein-coding chr6-481 chr6 101806191 101806401 + 19.7 0.000 intron (NM_001166247, intron 8 of 16) intron (NM_001166247, intron 8 of 16) 407311 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr12-745 chr12 9647993 9648203 + 19.7 0.000 promoter-TSS (NR_002814) promoter-TSS (NR_002814) 51 NR_046446 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2 member D pseudogene pseudo chr19-850 chr19 3142095 3142305 + 19.7 0.000 non-coding (NR_110670, exon 4 of 4) non-coding (NR_110670, exon 4 of 4) 6167 NM_002068 2769 Hs.73797 NM_002068 ENSG00000060558 GNA15 GNA16 G protein subunit alpha 15 protein-coding chr11-1200 chr11 122781432 122781642 + 19.7 0.000 intron (NM_001363365, intron 4 of 13) intron (NM_001363365, intron 4 of 13) -56963 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr11-876 chr11 63574615 63574825 + 19.7 0.000 3' UTR (NM_001128203, exon 5 of 5) 3' UTR (NM_001128203, exon 5 of 5) -11341 NM_017878 54979 Hs.272805 NM_017878 ENSG00000133328 PLAAT2 HRASLS2|PLA1/2-2|PLAAT-2 phospholipase A and acyltransferase 2 protein-coding chr5-1117 chr5 35884171 35884381 + 19.7 0.000 Intergenic L2c|LINE|L2 27385 NM_002185 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr19-704 chr19 50329284 50329494 + 19.7 0.000 promoter-TSS (NM_004977) promoter-TSS (NM_004977) -12 NM_004977 3748 Hs.467146 NM_004977 ENSG00000131398 KCNC3 KSHIIID|KV3.3|SCA13 potassium voltage-gated channel subfamily C member 3 protein-coding chr3-1285 chr3 65030956 65031166 + 19.7 0.000 Intergenic L2b|LINE|L2 -343061 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr16-561 chr16 84806604 84806814 + 19.7 0.000 Intergenic Intergenic -13276 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr2-1901 chr2 143513250 143513460 + 19.7 0.000 intron (NM_018460, intron 9 of 13) intron (NM_018460, intron 9 of 13) 383936 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr11-496 chr11 65371148 65371358 + 19.7 0.000 Intergenic Intergenic 10718 NM_001352381 283130 Hs.661604 NM_182556 ENSG00000162241 SLC25A45 - solute carrier family 25 member 45 protein-coding chr1-2135 chr1 244214387 244214597 + 19.7 0.000 Intergenic Intergenic -138143 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chrX-119 chrX 73851220 73851430 + 19.7 0.000 non-coding (NR_001564, exon 1 of 6) non-coding (NR_001564, exon 1 of 6) 1428 NR_001564 7503 Hs.529901 NR_001564 ENSG00000229807 XIST DXS1089|DXS399E|LINC00001|NCRNA00001|SXI1|swd66 X inactive specific transcript ncRNA chr6-482 chr6 106869968 106870178 + 19.7 0.000 Intergenic Intergenic -82532 NR_147986 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr1-1187 chr1 32464791 32465001 + 19.7 0.000 promoter-TSS (NM_001145720) promoter-TSS (NM_001145720) -176 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr11-963 chr11 123474223 123474433 + 19.7 0.000 intron (NM_001367421, intron 2 of 20) MIRc|SINE|MIR -35588 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr19-1017 chr19 34677407 34677617 + 19.7 0.000 promoter-TSS (NM_001289189) promoter-TSS (NM_001289189) -127 NM_001289182 55900 Hs.436350 NM_018443 ENSG00000089335 ZNF302 HSD16|MST154|MSTP154|ZNF135L|ZNF140L|ZNF327 zinc finger protein 302 protein-coding chr12-490 chr12 108730435 108730645 + 19.7 0.000 intron (NM_014325, intron 1 of 10) intron (NM_014325, intron 1 of 10) 303 NM_001276471 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr22-757 chr22 31552946 31553156 + 19.7 0.000 intron (NM_001007467, intron 6 of 32) AluJr|SINE|Alu 56515 NM_001258326 9814 Hs.62209 NM_014775 ENSG00000198089 SFI1 PISD|PPP1R139|hSfi1p SFI1 centrin binding protein protein-coding chr2-1047 chr2 140822494 140822704 + 19.7 0.000 intron (NM_018557, intron 31 of 90) intron (NM_018557, intron 31 of 90) -235914 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr11-1432 chr11 65403512 65403722 + 19.7 0.000 intron (NM_001300832, intron 8 of 9) L1M5|LINE|L1 16980 NM_031904 83786 Hs.578433 NM_031904 ENSG00000126391 FRMD8 FKSG44|iTAP FERM domain containing 8 protein-coding chr11-2062 chr11 73585915 73586125 + 19.7 0.000 intron (NM_001286051, intron 1 of 5) intron (NM_001286051, intron 1 of 5) 12092 NM_015159 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr11-1409 chr11 19919249 19919459 + 19.7 0.000 intron (NM_182964, intron 6 of 37) intron (NM_182964, intron 6 of 37) -103202 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr5-282 chr5 111224131 111224341 + 19.7 0.000 promoter-TSS (NM_001323377) promoter-TSS (NM_001323377) -148 NM_001744 814 Hs.438801 NM_001744 ENSG00000152495 CAMK4 CaMK IV|CaMK-GR|CaMKIV|caMK calcium/calmodulin dependent protein kinase IV protein-coding chr14-387 chr14 72617771 72617981 + 19.7 0.000 Intergenic Intergenic 101056 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr1-958 chr1 161389841 161390051 + 19.7 0.000 Intergenic CpG -22063 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr8-1022 chr8 19239508 19239718 + 19.7 0.000 intron (NR_038919, intron 1 of 4) MLT1C|LTR|ERVL-MaLR 5909 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr10-1082 chr10 28661131 28661341 + 19.7 0.000 Intergenic LTR8B|LTR|ERV1 -16285 NM_012342 25805 Hs.533336 NM_012342 ENSG00000095739 BAMBI NMA BMP and activin membrane bound inhibitor protein-coding chr1-1677 chr1 58848924 58849134 + 19.7 0.000 intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 63878 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr1-1447 chr1 228210296 228210506 + 19.7 0.000 intron (NR_073154, intron 2 of 3) intron (NR_073154, intron 2 of 3) 2271 NM_001098623 84033 Hs.650039 NM_052843 ENSG00000154358 OBSCN ARHGEF30|UNC89 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF protein-coding chr19-1067 chr19 46819965 46820175 + 19.7 0.000 Intergenic Intergenic 10634 NR_024258 100170220 Hs.541243 NR_024258 SNAR-E - small NF90 (ILF3) associated RNA E snRNA chr15-359 chr15 73632372 73632582 + 19.7 0.000 intron (NM_012428, intron 1 of 8) intron (NM_012428, intron 1 of 8) 912 NM_017455 27020 Hs.744867 NM_012428 ENSG00000156642 NPTN GP55|GP65|SDFR1|SDR1|np55|np65 neuroplastin protein-coding chr1-505 chr1 37808348 37808558 + 19.7 0.000 promoter-TSS (NM_024640) promoter-TSS (NM_024640) -245 NM_024640 79693 Hs.301564 NM_024640 ENSG00000196449 YRDC DRIP3|IRIP|SUA5 yrdC N6-threonylcarbamoyltransferase domain containing protein-coding chr5-1697 chr5 97838369 97838579 + 19.7 0.000 Intergenic Intergenic -2284 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA chr9-852 chr9 613880 614090 + 19.7 0.000 intron (NM_001256877, intron 2 of 12) intron (NM_001256877, intron 2 of 12) -72782 NM_001354335 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr17-831 chr17 66542371 66542581 + 19.7 0.000 intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -125622 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr9-1581 chr9 78933002 78933212 + 19.7 0.000 Intergenic L2|LINE|L2 212559 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr15-323 chr15 79004436 79004646 + 19.7 0.000 intron (NM_001145648, intron 14 of 26) intron (NM_001145648, intron 14 of 26) 1119 NM_153815 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr1-1474 chr1 79988488 79988698 + 19.7 0.000 Intergenic Intergenic -547162 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr3-775 chr3 9793534 9793744 + 19.7 0.000 promoter-TSS (NM_006354) promoter-TSS (NM_006354) 557 NM_001198780 10093 Hs.323342 NM_005718 ENSG00000241553 ARPC4 ARC20|P20-ARC actin related protein 2/3 complex subunit 4 protein-coding chr1-2103 chr1 155857272 155857482 + 19.7 0.000 promoter-TSS (NM_001282860) promoter-TSS (NM_001282860) -82 NM_001282860 54856 Hs.656361 NM_032292 ENSG00000116580 GON4L GON-4|GON4|YARP gon-4 like protein-coding chr7-1065 chr7 4791940 4792150 + 19.7 0.000 non-coding (NR_157345, exon 17 of 17) non-coding (NR_157345, exon 17 of 17) -3406 NR_039800 100616465 NR_039800 ENSG00000264474 MIR4656 - microRNA 4656 ncRNA chr2-1225 chr2 20611304 20611514 + 19.7 0.000 Intergenic Intergenic -18861 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr2-2440 chr2 55155720 55155930 + 19.7 0.000 Intergenic Intergenic -17994 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr9-1218 chr9 127186418 127186628 + 19.7 0.000 intron (NM_001190729, intron 11 of 17) intron (NM_001190729, intron 11 of 17) -63888 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr21-110 chr21 46092379 46092589 + 19.7 0.000 Intergenic Intergenic -5628 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr17-1071 chr17 81989425 81989635 + 19.7 0.000 intron (NR_045351, intron 3 of 14) intron (NR_045351, intron 3 of 14) 11901 NM_024083 79058 Hs.298351 NM_024083 ENSG00000169696 ASPSCR1 ASPCR1|ASPL|ASPS|RCC17|TUG|UBXD9|UBXN9 ASPSCR1 tether for SLC2A4, UBX domain containing protein-coding chr19-1069 chr19 580538 580748 + 19.7 0.000 intron (NM_198589, intron 3 of 7) intron (NM_198589, intron 3 of 7) 8047 NM_001728 682 Hs.501293 NM_001728 ENSG00000172270 BSG 5F7|CD147|EMMPRIN|EMPRIN|OK|SLC7A11|TCSF basigin (Ok blood group) protein-coding chr7-732 chr7 48280138 48280348 + 19.7 0.000 intron (NM_152701, intron 18 of 61) intron (NM_152701, intron 18 of 61) 108785 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr12-1172 chr12 46608789 46608999 + 19.7 0.000 intron (NR_125377, intron 3 of 3) intron (NR_125377, intron 3 of 3) 217103 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr8-641 chr8 59694732 59694942 + 19.7 0.000 Intergenic Intergenic 575627 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr7-739 chr7 70736697 70736907 + 19.7 0.000 intron (NM_015570, intron 6 of 18) intron (NM_015570, intron 6 of 18) -395342 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr1-2696 chr1 211378853 211379063 + 19.7 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -3797 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA chr12-853 chr12 570572 570782 + 19.7 0.000 intron (NM_016533, intron 1 of 3) (GCCCTG)n|Simple_repeat|Simple_repeat 15809 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr12-581 chr12 116658609 116658819 + 19.7 0.000 Intergenic Intergenic 79355 NM_001353625 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr19-1276 chr19 31054563 31054773 + 19.7 0.000 Intergenic LTR33C|LTR|ERVL -112842 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr11-1018 chr11 72072154 72072364 + 19.7 0.000 promoter-TSS (NR_036123) promoter-TSS (NR_036123) 43 NR_036123 100422953 NR_036123 ENSG00000263742 MIR3165 mir-3165 microRNA 3165 ncRNA chr1-405 chr1 228276056 228276266 + 19.7 0.000 intron (NM_052843, intron 21 of 80) CpG-2337 -62497 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr2-1866 chr2 24454388 24454598 + 19.7 0.000 Intergenic Intergenic -36761 NM_003743 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr3-1091 chr3 197031532 197031742 + 19.7 0.000 Intergenic Intergenic -1820 NM_033316 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chr9-1003 chr9 85224707 85224917 + 19.7 0.000 Intergenic Intergenic 517217 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr10-1243 chr10 87328016 87328226 + 19.7 0.000 intron (NR_024397, intron 2 of 5) L1MCa|LINE|L1 -14290 NR_029408 439994 Hs.651188 NR_029408 ENSG00000224914 LINC00863 - long intergenic non-protein coding RNA 863 ncRNA chr6-292 chr6 110874527 110874737 + 19.7 0.000 promoter-TSS (NM_001634) promoter-TSS (NM_001634) -152 NR_109768 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr2-3090 chr2 118696894 118697104 + 19.7 0.000 Intergenic MIRb|SINE|MIR -94033 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr17-913 chr17 78314042 78314252 + 19.7 0.000 Intergenic CpG -35655 NR_073178 100996291 Hs.744493 NR_073178 ENSG00000204277 LINC01993 - long intergenic non-protein coding RNA 1993 ncRNA chr9-341 chr9 129023657 129023867 + 19.7 0.000 intron (NM_020145, intron 1 of 10) intron (NM_020145, intron 1 of 10) 4569 NR_163192 56904 Hs.460238 NM_020145 ENSG00000148341 SH3GLB2 PP6569|PP9455|RRIG1 SH3 domain containing GRB2 like, endophilin B2 protein-coding chr1-2251 chr1 192539672 192539882 + 19.7 0.000 Intergenic Intergenic -35996 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G protein signaling 1 protein-coding chr14-482 chr14 58395947 58396157 + 19.7 0.000 exon (NM_207377, exon 1 of 5) exon (NM_207377, exon 1 of 5) 122 NM_207377 387990 Hs.592307 NM_207377 ENSG00000196860 TOMM20L UNQ9438 translocase of outer mitochondrial membrane 20 like protein-coding chr8-136 chr8 144798876 144799086 + 19.7 0.000 intron (NR_134285, intron 1 of 3) CpG 105 NM_213605 340385 Hs.521942 NM_213605 ENSG00000197363 ZNF517 - zinc finger protein 517 protein-coding chr1-755 chr1 35031702 35031912 + 19.7 0.000 intron (NM_007167, intron 1 of 15) CpG 138 NM_007167 9204 Hs.533986 NM_007167 ENSG00000163867 ZMYM6 Buster2|MYM|ZBED7|ZNF198L4|ZNF258 zinc finger MYM-type containing 6 protein-coding chr12-1135 chr12 89162757 89162967 + 19.7 0.000 Intergenic Intergenic -143170 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr6-599 chr6 52517728 52517938 + 19.7 0.000 intron (NM_012288, intron 2 of 10) MamSINE1|SINE|tRNA-RTE 59227 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr3-2668 chr3 39254794 39255004 + 19.7 0.000 Intergenic Intergenic 25137 NM_001337 1524 Hs.78913 NM_001337 ENSG00000168329 CX3CR1 CCRL1|CMKBRL1|CMKDR1|GPR13|GPRV28|V28 C-X3-C motif chemokine receptor 1 protein-coding chr10-1026 chr10 89284082 89284292 + 19.7 0.000 Intergenic Intergenic -17859 NM_001547 3433 Hs.437609 NM_001547 ENSG00000119922 IFIT2 G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 interferon induced protein with tetratricopeptide repeats 2 protein-coding chr10-1247 chr10 93876471 93876681 + 19.7 0.000 Intergenic Intergenic -17402 NR_144337 159371 Hs.632085 NM_153226 ENSG00000176273 SLC35G1 C10orf60|POST|TMEM20 solute carrier family 35 member G1 protein-coding chr11-885 chr11 105047222 105047432 + 19.7 0.000 Intergenic Intergenic -1992 NM_001017534 114769 Hs.348365 NM_052889 ENSG00000204397 CARD16 COP|COP1|PSEUDO-ICE caspase recruitment domain family member 16 protein-coding chr7-626 chr7 44088069 44088279 + 19.7 0.000 Intergenic Intergenic -5634 NR_104299 27434 Hs.596982 NM_013284 ENSG00000122678 POLM Pol Mu|Tdt-N DNA polymerase mu protein-coding chr1-1857 chr1 43776534 43776744 + 19.7 0.000 intron (NM_001270465, intron 2 of 7) L1MB8|LINE|L1 -49296 NR_125986 101929592 NR_125986 ENSG00000229444 LOC101929592 - uncharacterized LOC101929592 ncRNA chr9-376 chr9 89370896 89371106 + 19.7 0.000 intron (NR_163886, intron 13 of 15) (TG)n|Simple_repeat|Simple_repeat 52150 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr17-1018 chr17 32912410 32912620 + 19.7 0.000 Intergenic Intergenic -15395 NM_001033504 26022 Hs.3447 NM_015544 ENSG00000006042 TMEM98 TADA1 transmembrane protein 98 protein-coding chr22-424 chr22 37197132 37197342 + 19.7 0.000 intron (NM_001365878, intron 2 of 4) intron (NM_001365878, intron 2 of 4) 2186 NM_001365878 114904 Hs.22011 NM_031910 ENSG00000133466 C1QTNF6 CTFP6|CTRP6|ZACRP6 C1q and TNF related 6 protein-coding chr16-810 chr16 50210588 50210798 + 19.7 0.000 intron (NM_001365324, intron 1 of 11) intron (NM_001365324, intron 1 of 11) -55858 NM_001114 113 Hs.513578 NM_001114 ENSG00000121281 ADCY7 AC7 adenylate cyclase 7 protein-coding chr1-1267 chr1 26771770 26771980 + 19.7 0.000 intron (NM_139135, intron 12 of 19) intron (NM_139135, intron 12 of 19) -16088 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr2-774 chr2 64018829 64019039 + 19.7 0.000 intron (NM_001005739, intron 1 of 22) CpG 494 NM_016516 51542 Hs.48499 NM_016516 ENSG00000143952 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L VPS54 subunit of GARP complex protein-coding chr11-1648 chr11 108929275 108929485 + 19.7 0.000 intron (NM_004398, intron 17 of 17) intron (NM_004398, intron 17 of 17) 264311 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr16-862 chr16 89195644 89195854 + 19.7 0.000 TTS (NM_004933) TTS (NM_004933) 4788 NM_001366322 146429 Hs.447544 NM_001242757 ENSG00000259803 SLC22A31 - solute carrier family 22 member 31 protein-coding chr11-809 chr11 10233712 10233922 + 19.7 0.000 intron (NM_030962, intron 1 of 39) ERV3-16A3_LTR|LTR|ERVL 60390 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr17-525 chr17 81712208 81712418 + 19.7 0.000 promoter-TSS (NM_001270953) promoter-TSS (NM_001270953) 29 NM_012140 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr19-1117 chr19 18590604 18590814 + 19.7 0.000 intron (NM_001100418, intron 3 of 4) intron (NM_001100418, intron 3 of 4) 2024 NM_001100419 55049 Hs.655317 NM_017967 ENSG00000006015 REX1BD C19orf60 required for excision 1-B domain containing protein-coding chr7-660 chr7 135281587 135281797 + 19.7 0.000 Intergenic Intergenic 49713 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chrX-324 chrX 18873158 18873368 + 19.7 0.000 Intergenic Intergenic -17033 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr4-961 chr4 10305993 10306203 + 19.7 0.000 Intergenic Intergenic 151328 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr11-1087 chr11 122804239 122804449 + 19.7 0.000 intron (NM_001363365, intron 11 of 13) intron (NM_001363365, intron 11 of 13) -34156 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr10-550 chr10 73874461 73874671 + 19.7 0.000 promoter-TSS (NM_001367524) promoter-TSS (NM_001367524) -11 NM_001367542 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr8-371 chr8 23148386 23148596 + 19.7 0.000 exon (NM_003840, exon 3 of 9) exon (NM_003840, exon 3 of 9) 15536 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr3-534 chr3 32037794 32038004 + 19.7 0.000 Intergenic L1M6|LINE|L1 -56049 NM_017784 114884 Hs.150122 NM_017784 ENSG00000144645 OSBPL10 ORP10|OSBP9 oxysterol binding protein like 10 protein-coding chr12-1467 chr12 6253918 6254128 + 19.7 0.000 Intergenic Tigger12A|DNA|TcMar-Tigger 53623 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr21-122 chr21 34640963 34641173 + 19.7 0.000 Intergenic Intergenic -25955 NM_004414 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr16-523 chr16 88242592 88242802 + 19.7 0.000 Intergenic Intergenic 48416 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr19-881 chr19 49876619 49876829 + 19.7 0.000 promoter-TSS (NM_001278159) promoter-TSS (NM_001278159) -475 NM_001278159 84335 Hs.515542 NM_032375 ENSG00000204673 AKT1S1 Lobe|PRAS40 AKT1 substrate 1 protein-coding chr3-711 chr3 170310218 170310428 + 19.7 0.000 Intergenic Intergenic -47392 NM_001145098 6498 Hs.536655 NM_005414 ENSG00000136603 SKIL SNO|SnoA|SnoI|SnoN SKI like proto-oncogene protein-coding chr3-443 chr3 52705844 52706054 + 19.7 0.000 promoter-TSS (NM_014041) promoter-TSS (NM_014041) 134 NM_001010983 55830 Hs.297304 NM_018446 ENSG00000016864 GLT8D1 AD-017|MSTP139 glycosyltransferase 8 domain containing 1 protein-coding chr11-1702 chr11 68042297 68042507 + 19.7 0.000 promoter-TSS (NM_006053) promoter-TSS (NM_006053) -578 NM_006053 10312 Hs.495985 NM_006019 ENSG00000110719 TCIRG1 ATP6N1C|ATP6V0A3|Atp6i|OC-116kDa|OC116|OPTB1|Stv1|TIRC7|Vph1|a3 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 protein-coding chr17-2290 chr17 39281002 39281212 + 19.7 0.000 intron (NM_001370209, intron 8 of 13) intron (NM_001370209, intron 8 of 13) -16293 NR_162098 113839521 NR_162098 MIR548BC - microRNA 548BC ncRNA chr14-480 chr14 54366986 54367196 + 19.7 0.000 Intergenic Intergenic -29777 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr6-896 chr6 122381603 122381813 + 19.7 0.000 Intergenic Intergenic -17843 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr1-2596 chr1 59595906 59596116 + 19.7 0.000 intron (NM_001350794, intron 8 of 14) intron (NM_001350794, intron 8 of 14) 80381 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr11-533 chr11 66510474 66510684 + 19.7 0.000 promoter-TSS (NM_024649) promoter-TSS (NM_024649) -56 NM_024649 582 Hs.502915 NM_024649 ENSG00000174483 BBS1 BBS2L2 Bardet-Biedl syndrome 1 protein-coding chr22-384 chr22 46044687 46044897 + 19.7 0.000 promoter-TSS (NR_027036) promoter-TSS (NR_027036) 76 NR_027036 100271722 Hs.528519 NR_027036 LINC00899 - long intergenic non-protein coding RNA 899 ncRNA chr5-828 chr5 19547630 19547840 + 19.7 0.000 intron (NM_001349559, intron 8 of 12) intron (NM_001349559, intron 8 of 12) 338537 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr2-950 chr2 26758102 26758312 + 19.7 0.000 Intergenic MER41A|LTR|ERV1 -6077 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr12-1147 chr12 124007928 124008138 + 19.7 0.000 intron (NM_001204298, intron 3 of 4) L1MC5a|LINE|L1 34818 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr17-1087 chr17 45197726 45197936 + 19.7 0.000 intron (NR_147507, intron 2 of 2) intron (NR_147507, intron 2 of 2) 23934 NR_147507 339192 Hs.560498 NR_147507 ENSG00000267121 LOC339192 - uncharacterized LOC339192 ncRNA chr7-1048 chr7 116272017 116272227 + 19.7 0.000 Intergenic Intergenic 14542 NR_130921 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr7-1826 chr7 123538182 123538392 + 19.7 0.000 non-coding (NR_104168, exon 6 of 6) non-coding (NR_104168, exon 6 of 6) -3623 NR_104245 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr5-538 chr5 78496456 78496666 + 19.7 0.000 intron (NM_005779, intron 4 of 4) intron (NM_005779, intron 4 of 4) 135944 NM_001290229 9522 Hs.482587 NM_004866 ENSG00000085365 SCAMP1 SCAMP|SCAMP37 secretory carrier membrane protein 1 protein-coding chr17-1565 chr17 19482771 19482981 + 19.7 0.000 Intergenic MER4D1|LTR|ERV1 -50978 NM_018242 55244 Hs.232054 NM_018242 ENSG00000142494 SLC47A1 MATE1 solute carrier family 47 member 1 protein-coding chr1-883 chr1 19974950 19975160 + 19.7 0.000 TTS (NM_000300) TTS (NM_000300) 4604 NM_001161729 5320 Hs.466804 NM_000300 ENSG00000188257 PLA2G2A MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2 phospholipase A2 group IIA protein-coding chr9-951 chr9 18490937 18491147 + 19.7 0.000 intron (NM_052866, intron 1 of 12) intron (NM_052866, intron 1 of 12) 16889 NM_052866 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr7-756 chr7 135714613 135714823 + 19.7 0.000 intron (NM_001318192, intron 2 of 15) intron (NM_001318192, intron 2 of 15) 13468 NM_012450 26266 Hs.490241 NM_012450 ENSG00000164707 SLC13A4 NAS2|SUT-1|SUT1 solute carrier family 13 member 4 protein-coding chr6-1569 chr6 1797891 1798101 + 19.7 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 188081 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr10-779 chr10 34280635 34280845 + 19.7 0.000 intron (NM_001184789, intron 19 of 22) intron (NM_001184789, intron 19 of 22) -508060 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr5-1227 chr5 148011885 148012095 + 19.6 0.000 Intergenic Intergenic -51982 NM_006846 11005 Hs.331555 NM_006846 ENSG00000133710 SPINK5 LEKTI|LETKI|NETS|NS|VAKTI serine peptidase inhibitor, Kazal type 5 protein-coding chr17-1179 chr17 51046897 51047107 + 19.6 0.000 promoter-TSS (NM_001251971) promoter-TSS (NM_001251971) -124 NM_001251971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr11-1269 chr11 33674134 33674344 + 19.6 0.000 TTS (NM_012194) TTS (NM_012194) 26501 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr4-1258 chr4 15318974 15319184 + 19.6 0.000 intron (NR_125911, intron 1 of 5) L1MC4a|LINE|L1 -20909 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr1-1290 chr1 248825994 248826204 + 19.6 0.000 promoter-TSS (NR_036070) promoter-TSS (NR_036070) -184 NM_030645 80851 Hs.298573 NM_030645 ENSG00000175137 SH3BP5L - SH3 binding domain protein 5 like protein-coding chr15-779 chr15 45705615 45705825 + 19.6 0.000 intron (NR_135680, intron 1 of 4) MIRb|SINE|MIR 525 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr3-846 chr3 25573080 25573290 + 19.6 0.000 intron (NR_110893, intron 4 of 6) LTR16C|LTR|ERVL 91187 NM_001068 7155 Hs.475733 NM_001068 ENSG00000077097 TOP2B TOPIIB|top2beta DNA topoisomerase II beta protein-coding chr17-1938 chr17 80759030 80759240 + 19.6 0.000 intron (NM_020761, intron 6 of 33) FLAM_A|SINE|Alu 46497 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr9-1245 chr9 15244088 15244298 + 19.6 0.000 intron (NM_001168340, intron 2 of 18) intron (NM_001168340, intron 2 of 18) 6025 NM_001168342 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr5-1159 chr5 173782177 173782387 + 19.6 0.000 Intergenic Intergenic 8660 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr12-289 chr12 6093232 6093442 + 19.6 0.000 intron (NM_000552, intron 6 of 51) LTR16|LTR|ERVL 31338 NM_000552 7450 Hs.440848 NM_000552 ENSG00000110799 VWF F8VWF|VWD von Willebrand factor protein-coding chr7-752 chr7 116177030 116177240 + 19.6 0.000 Intergenic Intergenic -33404 NM_015641 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr9-1342 chr9 121863992 121864202 + 19.6 0.000 intron (NM_001139442, intron 7 of 8) intron (NM_001139442, intron 7 of 8) 121312 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr8-381 chr8 18661008 18661218 + 19.6 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 147754 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr7-957 chr7 156640523 156640733 + 19.6 0.000 promoter-TSS (NM_030936) promoter-TSS (NM_030936) -31 NM_030936 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr4-1001 chr4 184653773 184653983 + 19.6 0.000 intron (NM_001345901, intron 2 of 11) intron (NM_001345901, intron 2 of 11) 4140 NR_144312 201973 Hs.481307 NM_152683 ENSG00000164306 PRIMPOL CCDC111|MYP22|Primpol1 primase and DNA directed polymerase protein-coding chr1-2124 chr1 206754040 206754250 + 19.6 0.000 Intergenic L2b|LINE|L2 -16628 NM_153758 29949 Hs.661017 NM_013371 ENSG00000142224 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding chr10-501 chr10 101830757 101830967 + 19.6 0.000 intron (NM_014591, intron 2 of 9) CpG 9009 NM_173194 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr12-557 chr12 30796313 30796523 + 19.6 0.000 intron (NR_040245, intron 1 of 4) CpG 737 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr5-988 chr5 34891985 34892195 + 19.6 0.000 intron (NM_001317949, intron 9 of 10) intron (NM_001317949, intron 9 of 10) 23414 NM_002853 5810 Hs.38114 NM_002853 ENSG00000113456 RAD1 HRAD1|REC1 RAD1 checkpoint DNA exonuclease protein-coding chr16-476 chr16 50065767 50065977 + 19.6 0.000 promoter-TSS (NM_001329729) promoter-TSS (NM_001329729) -98 NM_182922 55027 Hs.733027 NM_017939 ENSG00000155393 HEATR3 SYO1 HEAT repeat containing 3 protein-coding chr6-1011 chr6 38350914 38351124 + 19.6 0.000 intron (NM_052893, intron 7 of 11) intron (NM_052893, intron 7 of 11) -130577 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr8-751 chr8 70273644 70273854 + 19.6 0.000 intron (NM_001321711, intron 2 of 21) intron (NM_001321711, intron 2 of 21) 129641 NM_001321712 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr7-540 chr7 100168435 100168645 + 19.6 0.000 promoter-TSS (NM_024637) promoter-TSS (NM_024637) 77 NM_024637 79690 Hs.44856 NM_024637 ENSG00000197093 GAL3ST4 GAL3ST-4 galactose-3-O-sulfotransferase 4 protein-coding chr12-757 chr12 75826038 75826248 + 19.6 0.000 Intergenic L2|LINE|L2 205633 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr12-722 chr12 13135763 13135973 + 19.6 0.000 Intergenic Intergenic -32201 NM_001367361 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr22-329 chr22 43152302 43152512 + 19.6 0.000 intron (NM_001256530, intron 1 of 3) intron (NM_001256530, intron 1 of 3) 472 NM_001256530 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr4-509 chr4 98728560 98728770 + 19.6 0.000 Intergenic L2c|LINE|L2 69763 NR_148380 105377342 Hs.122081 NR_148380 LOC105377342 - uncharacterized LOC105377342 ncRNA chr5-410 chr5 78504842 78505052 + 19.6 0.000 intron (NM_005779, intron 4 of 4) intron (NM_005779, intron 4 of 4) 143825 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr4-1040 chr4 40843026 40843236 + 19.6 0.000 intron (NM_001166051, intron 1 of 6) intron (NM_001166051, intron 1 of 6) 14024 NM_001166051 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr10-1099 chr10 73796751 73796961 + 19.6 0.000 non-coding (NR_160292, exon 17 of 27) non-coding (NR_160292, exon 17 of 27) 4543 NR_038357 100507331 Hs.631828 NR_038357 ENSG00000272589 ZSWIM8-AS1 - ZSWIM8 antisense RNA 1 ncRNA chr16-580 chr16 1408327 1408537 + 19.6 0.000 intron (NR_160278, intron 2 of 15) CpG 6272 NM_001193388 64718 Hs.643536 NM_001037125 ENSG00000059145 UNKL C16orf28|ZC3H5L|ZC3HDC5L unk like zinc finger protein-coding chr5-627 chr5 142327642 142327852 + 19.6 0.000 intron (NR_120664, intron 1 of 3) L2b|LINE|L2 2454 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr12-1043 chr12 75944345 75944555 + 19.6 0.000 Intergenic Intergenic 87326 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr8-468 chr8 27772452 27772662 + 19.6 0.000 promoter-TSS (NR_130762) promoter-TSS (NR_130762) 83 NR_130762 55246 Hs.445512 NM_018246 ENSG00000147419 CCDC25 - coiled-coil domain containing 25 protein-coding chr8-330 chr8 29066089 29066299 + 19.6 0.000 Intergenic Intergenic 174880 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr10-1274 chr10 5692734 5692944 + 19.6 0.000 intron (NM_017782, intron 1 of 20) intron (NM_017782, intron 1 of 20) 8001 NR_135800 54906 Hs.610717 NM_017782 ENSG00000108021 TASOR2 C10orf18|FAM208B|bA318E3.2 transcription activation suppressor family member 2 protein-coding chr6-377 chr6 149941839 149942049 + 19.6 0.000 promoter-TSS (NM_025217) promoter-TSS (NM_025217) -70 NM_025217 80328 Hs.656778 NM_025217 ENSG00000131015 ULBP2 ALCAN-alpha|N2DL2|NKG2DL2|RAET1H|RAET1L UL16 binding protein 2 protein-coding chr19-1582 chr19 7512445 7512655 + 19.6 0.000 Intergenic Intergenic -3553 NM_018083 140467 Hs.133475 NM_018083 ENSG00000198816 ZNF358 ZFEND zinc finger protein 358 protein-coding chr2-592 chr2 219160618 219160828 + 19.6 0.000 TTS (NM_001144889) TTS (NM_001144889) 142 NM_024782 79840 Hs.225988 NM_024782 ENSG00000187736 NHEJ1 XLF non-homologous end joining factor 1 protein-coding chr14-996 chr14 102295428 102295638 + 19.6 0.000 intron (NR_148552, intron 1 of 9) intron (NR_148552, intron 1 of 9) 9631 NM_001353831 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr6-674 chr6 133951905 133952115 + 19.6 0.000 promoter-TSS (NM_001253676) promoter-TSS (NM_001253676) -160 NM_001253676 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr7-1033 chr7 47724509 47724719 + 19.6 0.000 Intergenic Intergenic -36862 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr5-724 chr5 132556764 132556974 + 19.6 0.000 promoter-TSS (NM_005732) promoter-TSS (NM_005732) -108 NM_005732 10111 Hs.633509 NM_005732 ENSG00000113522 RAD50 NBSLD|RAD502|hRad50 RAD50 double strand break repair protein protein-coding chr4-1297 chr4 100302309 100302519 + 19.6 0.000 Intergenic Intergenic 92833 NR_135619 107399301 NR_135619 SNORA101A - small nucleolar RNA, H/ACA box 101A snoRNA chr2-1985 chr2 34105088 34105298 + 19.6 0.000 intron (NR_126403, intron 4 of 5) L1MC5|LINE|L1 37967 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr11-1340 chr11 2457922 2458132 + 19.6 0.000 intron (NM_000218, intron 1 of 15) L1MC5|LINE|L1 -3427 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr20-498 chr20 17590203 17590413 + 19.6 0.000 intron (NM_006870, intron 1 of 3) intron (NM_006870, intron 1 of 3) 20233 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr1-2819 chr1 31954765 31954975 + 19.6 0.000 Intergenic Intergenic -16502 NM_080391 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr11-1704 chr11 70030126 70030336 + 19.6 0.000 Intergenic Intergenic 33693 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr1-764 chr1 59669865 59670075 + 19.6 0.000 intron (NM_001350794, intron 13 of 14) intron (NM_001350794, intron 13 of 14) 63326 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr14-413 chr14 35384543 35384753 + 19.6 0.000 Intergenic Intergenic 20106 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr11-1490 chr11 131033195 131033405 + 19.6 0.000 Intergenic Intergenic -116813 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr18-263 chr18 2111548 2111758 + 19.6 0.000 Intergenic Intergenic 459852 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr3-1175 chr3 155934216 155934426 + 19.6 0.000 intron (NM_003875, intron 13 of 15) MLT1C|LTR|ERVL-MaLR 63671 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr4-449 chr4 95267118 95267328 + 19.6 0.000 intron (NM_003728, intron 4 of 15) intron (NM_003728, intron 4 of 15) 175732 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr16-855 chr16 75380893 75381103 + 19.6 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) 52505 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr16-1288 chr16 75240961 75241171 + 19.6 0.000 intron (NM_001170720, intron 3 of 7) (ATGTGC)n|Simple_repeat|Simple_repeat -2406 NM_001170721 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr8-1257 chr8 135581050 135581260 + 19.6 0.000 intron (NM_006558, intron 5 of 8) intron (NM_006558, intron 5 of 8) 123699 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr16-962 chr16 89719252 89719462 + 19.6 0.000 intron (NM_004913, intron 1 of 14) intron (NM_004913, intron 1 of 14) -1011 NR_110128 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr3-849 chr3 36124217 36124427 + 19.6 0.000 Intergenic L1M1|LINE|L1 -256165 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr10-1473 chr10 111656137 111656347 + 19.6 0.000 Intergenic Intergenic 527523 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr16-1075 chr16 56383059 56383269 + 19.6 0.000 intron (NM_001144, intron 10 of 13) L2a|LINE|L2 41825 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr6-557 chr6 80769258 80769468 + 19.6 0.000 Intergenic Intergenic 662692 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr17-643 chr17 28347312 28347522 + 19.6 0.000 TTS (NM_021137) TTS (NM_021137) 10110 NM_015584 26073 Hs.241543 NM_015584 ENSG00000004142 POLDIP2 PDIP38|POLD4|p38 DNA polymerase delta interacting protein 2 protein-coding chr17-504 chr17 4939901 4940111 + 19.6 0.000 promoter-TSS (NM_003562) promoter-TSS (NM_003562) 40 NM_003562 8402 Hs.184877 NM_003562 ENSG00000108528 SLC25A11 OGC|SLC20A4 solute carrier family 25 member 11 protein-coding chr19-1413 chr19 45927677 45927887 + 19.6 0.000 Intergenic LTR67B|LTR|ERVL -13004 NM_001029861 339345 Hs.434218 NM_001029861 ENSG00000188425 NANOS2 NOS2|ZC2HC12B nanos C2HC-type zinc finger 2 protein-coding chr6-508 chr6 3162604 3162814 + 19.6 0.000 Intergenic CpG -5165 NM_001310315 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr2-2225 chr2 165469569 165469779 + 19.6 0.000 promoter-TSS (NM_001172173) promoter-TSS (NM_001172173) -24 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr2-2680 chr2 241340212 241340422 + 19.6 0.000 intron (NM_001349311, intron 8 of 13) intron (NM_001349311, intron 8 of 13) -15968 NM_014808 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr12-1185 chr12 76470616 76470826 + 19.6 0.000 intron (NM_020841, intron 2 of 23) intron (NM_020841, intron 2 of 23) -47436 NM_001319655 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr11-1168 chr11 57904376 57904586 + 19.6 0.000 Intergenic AluJb|SINE|Alu -119400 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr13-166 chr13 76384179 76384389 + 19.6 0.000 Intergenic Intergenic -449152 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr17-1390 chr17 17824992 17825202 + 19.6 0.000 intron (NM_001005291, intron 1 of 19) intron (NM_001005291, intron 1 of 19) -1467 NM_001321096 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr19-600 chr19 2014146 2014356 + 19.6 0.000 intron (NM_017797, intron 1 of 8) intron (NM_017797, intron 1 of 8) 1463 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr18-404 chr18 25230888 25231098 + 19.6 0.000 intron (NM_001308225, intron 2 of 6) intron (NM_001308225, intron 2 of 6) 121173 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr2-457 chr2 159712242 159712452 + 19.6 0.000 promoter-TSS (NM_022826) promoter-TSS (NM_022826) 95 NR_110586 29994 Hs.470369 NM_013450 ENSG00000123636 BAZ2B WALp4 bromodomain adjacent to zinc finger domain 2B protein-coding chr11-2561 chr11 104859201 104859411 + 19.6 0.000 Intergenic L1MC1|LINE|L1 39364 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr1-1946 chr1 35505959 35506169 + 19.6 0.000 intron (NM_024874, intron 3 of 20) intron (NM_024874, intron 3 of 20) 51339 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr2-421 chr2 241217415 241217625 + 19.6 0.000 intron (NM_001370694, intron 19 of 24) intron (NM_001370694, intron 19 of 24) 28843 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr9-686 chr9 68500783 68500993 + 19.6 0.000 intron (NM_021965, intron 10 of 10) intron (NM_021965, intron 10 of 10) 39979 NM_153237 169693 Hs.663056 NM_153237 ENSG00000181778 TMEM252 C9orf71 transmembrane protein 252 protein-coding chr1-1557 chr1 2337637 2337847 + 19.6 0.000 intron (NM_024848, intron 10 of 13) intron (NM_024848, intron 10 of 13) 14919 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr7-1638 chr7 33250440 33250650 + 19.6 0.000 intron (NM_198428, intron 5 of 22) intron (NM_198428, intron 5 of 22) 120981 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr22-486 chr22 46303440 46303650 + 19.6 0.000 intron (NM_016426, intron 2 of 11) intron (NM_016426, intron 2 of 11) 6675 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding chr1-3475 chr1 54601463 54601673 + 19.6 0.000 intron (NM_015547, intron 9 of 16) intron (NM_015547, intron 9 of 16) 21957 NM_176782 338094 Hs.234786 NM_176782 ENSG00000162391 FAM151A C1orf179 family with sequence similarity 151 member A protein-coding chr9-689 chr9 81689767 81689977 + 19.6 0.000 promoter-TSS (NM_001303103) promoter-TSS (NM_001303103) 159 NR_109772 101927502 Hs.528628 NR_109772 ENSG00000233926 LOC101927502 - uncharacterized LOC101927502 ncRNA chr16-762 chr16 67538841 67539051 + 19.6 0.000 intron (NM_001193522, intron 3 of 21) intron (NM_001193522, intron 3 of 21) 1484 NM_001193524 79567 Hs.152717 NM_024519 ENSG00000039523 RIPOR1 FAM65A RHO family interacting cell polarization regulator 1 protein-coding chr14-887 chr14 103626487 103626697 + 19.6 0.000 Intergenic L2b|LINE|L2 -2596 NM_005552 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr9-1280 chr9 14205534 14205744 + 19.6 0.000 intron (NR_161383, intron 1 of 7) intron (NR_161383, intron 1 of 7) -24835 NR_161385 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr10-497 chr10 31603588 31603798 + 19.6 0.000 Intergenic CpG -203938 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr11-2096 chr11 111081123 111081333 + 19.6 0.000 Intergenic Intergenic 16090 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr5-1113 chr5 27315656 27315866 + 19.6 0.000 Intergenic Intergenic -156531 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr5-1180 chr5 54419678 54419888 + 19.6 0.000 Intergenic Intergenic -35916 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr10-398 chr10 119080769 119080979 + 19.6 0.000 promoter-TSS (NM_003750) promoter-TSS (NM_003750) -57 NM_003750 8661 Hs.523299 NM_003750 ENSG00000107581 EIF3A EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 eukaryotic translation initiation factor 3 subunit A protein-coding chr8-506 chr8 13265485 13265695 + 19.6 0.000 intron (NM_001348082, intron 5 of 16) intron (NM_001348082, intron 5 of 16) 10931 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr1-1541 chr1 223834866 223835076 + 19.6 0.000 intron (NM_005426, intron 1 of 18) intron (NM_005426, intron 1 of 18) 10976 NM_001031685 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chrX-267 chrX 101407928 101408138 + 19.6 0.000 promoter-TSS (NM_001032393) promoter-TSS (NM_001032393) -20 NM_000169 2717 Hs.69089 NM_000169 ENSG00000102393 GLA GALA galactosidase alpha protein-coding chr6-322 chr6 53061664 53061874 + 19.6 0.000 promoter-TSS (NM_016513) promoter-TSS (NM_016513) 33 NM_016513 22858 Hs.417022 NM_014920 ENSG00000112144 ICK ECO|EJM10|LCK2|MRK intestinal cell kinase protein-coding chr12-744 chr12 6778364 6778574 + 19.6 0.000 TTS (NM_002286) TTS (NM_002286) 5949 NM_002286 3902 Hs.409523 NM_002286 ENSG00000089692 LAG3 CD223 lymphocyte activating 3 protein-coding chr6-934 chr6 85404862 85405072 + 19.6 0.000 promoter-TSS (NR_134633) promoter-TSS (NR_134633) -165 NR_134633 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr11-1110 chr11 117259527 117259737 + 19.6 0.000 intron (NM_001077239, intron 6 of 14) L1ME2z|LINE|L1 26896 NM_001278249 257160 Hs.591934 NM_207343 ENSG00000167257 RNF214 - ring finger protein 214 protein-coding chr5-726 chr5 137622273 137622483 + 19.6 0.000 intron (NM_017415, intron 14 of 14) intron (NM_017415, intron 14 of 14) 25271 NR_030588 100126343 NR_030588 ENSG00000216009 MIR874 MIRN874|hsa-mir-874|mir-874 microRNA 874 ncRNA chr10-867 chr10 5628355 5628565 + 19.6 0.000 Intergenic Intergenic -32342 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr3-458 chr3 64685918 64686128 + 19.6 0.000 intron (NR_038264, intron 1 of 5) CpG 1153 NR_038264 100507098 Hs.660881 NR_038264 ENSG00000241684 ADAMTS9-AS2 - ADAMTS9 antisense RNA 2 ncRNA chr2-2144 chr2 159940044 159940254 + 19.6 0.000 3' UTR (NM_001195641, exon 30 of 30) 3' UTR (NM_001195641, exon 30 of 30) -35393 NM_001198759 100526664 Hs.153563 NM_001198759 ENSG00000248672 LY75-CD302 CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6 LY75-CD302 readthrough protein-coding chr19-1755 chr19 4976445 4976655 + 19.6 0.000 intron (NM_001370094, intron 1 of 10) intron (NM_001370094, intron 1 of 10) 7437 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr1-2867 chr1 184242591 184242801 + 19.6 0.000 Intergenic Intergenic -144333 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr1-2631 chr1 116529290 116529500 + 19.6 0.000 intron (NM_001779, intron 3 of 5) intron (NM_001779, intron 3 of 5) 30716 NR_039621 100616384 NR_039621 ENSG00000264419 MIR548AC - microRNA 548ac ncRNA chr6-566 chr6 12348809 12349019 + 19.6 0.000 Intergenic Intergenic 58553 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr3-1732 chr3 125540392 125540602 + 19.6 0.000 intron (NM_022776, intron 10 of 12) intron (NM_022776, intron 10 of 12) -20295 NM_003794 8723 Hs.507243 NM_003794 ENSG00000114520 SNX4 ATG24B sorting nexin 4 protein-coding chr14-568 chr14 64445549 64445759 + 19.6 0.000 intron (NM_005956, intron 22 of 27) intron (NM_005956, intron 22 of 27) -19845 NM_004857 9495 Hs.656683 NM_004857 ENSG00000179841 AKAP5 AKAP75|AKAP79|H21 A-kinase anchoring protein 5 protein-coding chr10-1348 chr10 110993247 110993457 + 19.6 0.000 intron (NM_007373, intron 3 of 8) intron (NM_007373, intron 3 of 8) 4426 NR_031614 100313921 NR_031614 ENSG00000221214 MIR548E MIRN548E|hsa-mir-548e microRNA 548e ncRNA chr15-231 chr15 40108879 40109089 + 19.6 0.000 promoter-TSS (NM_001003943) promoter-TSS (NM_001003943) -105 NM_001003940 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr8-554 chr8 38626199 38626409 + 19.6 0.000 Intergenic Intergenic -25047 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr19-833 chr19 16197779 16197989 + 19.6 0.000 promoter-TSS (NM_001130524) promoter-TSS (NM_001130524) -27 NM_001130524 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr1-1719 chr1 31956133 31956343 + 19.6 0.000 Intergenic Intergenic -17870 NM_080391 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr17-988 chr17 43878666 43878876 + 19.6 0.000 intron (NM_001278371, intron 11 of 11) intron (NM_001278371, intron 11 of 11) 21853 NM_001278376 4355 Hs.514208 NM_005374 ENSG00000108852 MPP2 DLG2 membrane palmitoylated protein 2 protein-coding chr18-497 chr18 21300701 21300911 + 19.6 0.000 intron (NM_001142966, intron 1 of 32) intron (NM_001142966, intron 1 of 32) 58564 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr10-493 chr10 103451281 103451491 + 19.6 0.000 intron (NM_015916, intron 1 of 3) intron (NM_015916, intron 1 of 3) 984 NR_046344 51063 Hs.241545 NM_015916 ENSG00000138172 CALHM2 FAM26B calcium homeostasis modulator family member 2 protein-coding chr12-1863 chr12 50676867 50677077 + 19.6 0.000 intron (NM_173602, intron 7 of 37) intron (NM_173602, intron 7 of 37) -87129 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr14-228 chr14 102438153 102438363 + 19.6 0.000 intron (NM_014844, intron 10 of 19) (CCCGCT)n|Simple_repeat|Simple_repeat 71518 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr15-806 chr15 71049029 71049239 + 19.6 0.000 intron (NM_017691, intron 15 of 15) intron (NM_017691, intron 15 of 15) -92315 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr14-711 chr14 91149680 91149890 + 19.6 0.000 intron (NM_001286470, intron 4 of 16) intron (NM_001286470, intron 4 of 16) 23359 NR_003709 100124539 Hs.693444 NR_003709 ENSG00000221102 SNORA11B - small nucleolar RNA, H/ACA box 11B snoRNA chr5-950 chr5 96968101 96968311 + 19.6 0.000 intron (NM_175920, intron 1 of 17) intron (NM_175920, intron 1 of 17) 9773 NM_175920 4012 Hs.527199 NM_005575 ENSG00000113441 LNPEP CAP|IRAP|P-LAP|PLAP leucyl and cystinyl aminopeptidase protein-coding chr12-352 chr12 124567624 124567834 + 19.6 0.000 promoter-TSS (NM_001206654) promoter-TSS (NM_001206654) -117 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr22-588 chr22 44586910 44587120 + 19.6 0.000 Intergenic Intergenic 17675 NR_028409 388910 Hs.332685 NM_001012986 ENSG00000187012 LINC00207 NCRNA00207 long intergenic non-protein coding RNA 207 ncRNA chr1-1220 chr1 8329491 8329701 + 19.6 0.000 intron (NM_001080397, intron 4 of 8) intron (NM_001080397, intron 4 of 8) 11511 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr10-849 chr10 35447746 35447956 + 19.6 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 110977 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr11-1143 chr11 112157369 112157579 + 19.6 0.000 intron (NM_001243211, intron 1 of 4) L2c|LINE|L2 6620 NM_001243211 3606 Hs.83077 NM_001562 ENSG00000150782 IL18 IGIF|IL-18|IL-1g|IL1F4 interleukin 18 protein-coding chr22-285 chr22 36481991 36482201 + 19.6 0.000 promoter-TSS (NM_012473) promoter-TSS (NM_012473) -456 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr5-1178 chr5 42950707 42950917 + 19.6 0.000 Intergenic Intergenic 42521 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr1-1553 chr1 1291915 1292125 + 19.6 0.000 TTS (NR_037668) TTS (NR_037668) 4150 NR_106784 102465434 NR_106784 ENSG00000278073 MIR6726 hsa-mir-6726 microRNA 6726 ncRNA chr1-1382 chr1 94022592 94022802 + 19.6 0.000 intron (NM_000350, intron 32 of 49) intron (NM_000350, intron 32 of 49) 98451 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr14-483 chr14 58608088 58608298 + 19.6 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -25875 NR_046093 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr7-778 chr7 79692079 79692289 + 19.6 0.000 Intergenic MER54B|LTR|ERVL 238224 NR_038343 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr14-811 chr14 99415783 99415993 + 19.6 0.000 intron (NM_199123, intron 6 of 8) intron (NM_199123, intron 6 of 8) 64971 NM_032233 84193 Hs.510407 NM_032233 ENSG00000183576 SETD3 C14orf154|hSETD3 SET domain containing 3, actin histidine methyltransferase protein-coding chr18-418 chr18 58186596 58186806 + 19.6 0.000 intron (NM_001144965, intron 2 of 30) MIRb|SINE|MIR -8704 NM_001144970 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr11-1729 chr11 102346989 102347199 + 19.6 0.000 promoter-TSS (NM_001256166) promoter-TSS (NM_001256166) -88 NM_001166 329 Hs.696238 NM_001166 ENSG00000110330 BIRC2 API1|HIAP2|Hiap-2|MIHB|RNF48|c-IAP1|cIAP1 baculoviral IAP repeat containing 2 protein-coding chr4-441 chr4 4290206 4290416 + 19.6 0.000 promoter-TSS (NM_001330625) promoter-TSS (NM_001330625) 60 NR_138481 166793 Hs.419997 NM_145291 ENSG00000168826 ZBTB49 ZNF509 zinc finger and BTB domain containing 49 protein-coding chr17-2310 chr17 44763344 44763554 + 19.6 0.000 intron (NM_001318933, intron 2 of 26) intron (NM_001318933, intron 2 of 26) 4461 NM_001318933 4185 Hs.6088 NM_002390 ENSG00000073670 ADAM11 MDC ADAM metallopeptidase domain 11 protein-coding chr19-1368 chr19 1177787 1177997 + 19.6 0.000 Intergenic Intergenic -3624 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr9-357 chr9 83980326 83980536 + 19.6 0.000 promoter-TSS (NM_001318188) promoter-TSS (NM_001318188) 72 NM_001358294 80010 Hs.726327 NM_024945 ENSG00000178966 RMI1 BLAP75|C9orf76|FAAP75 RecQ mediated genome instability 1 protein-coding chr10-1675 chr10 125119112 125119322 + 19.6 0.000 intron (NM_001083914, intron 1 of 10) intron (NM_001083914, intron 1 of 10) 39560 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr1-1360 chr1 27143547 27143757 + 19.6 0.000 intron (NM_003047, intron 1 of 11) intron (NM_003047, intron 1 of 11) 11473 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr5-1002 chr5 73617481 73617691 + 19.6 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -8572 NM_001080479 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr2-1803 chr2 40300477 40300687 + 19.6 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 129722 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr22-696 chr22 28977021 28977231 + 19.6 0.000 intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 54350 NR_046851 100874123 Hs.674708 NR_046851 ENSG00000177993 ZNRF3-AS1 - ZNRF3 antisense RNA 1 ncRNA chr11-645 chr11 67288400 67288610 + 19.6 0.000 promoter-TSS (NM_001347901) promoter-TSS (NM_001347901) -798 NM_001347901 338692 Hs.438673 NM_207354 ENSG00000172932 ANKRD13D - ankyrin repeat domain 13D protein-coding chr4-418 chr4 155376772 155376982 + 19.6 0.000 promoter-TSS (NM_001039580) promoter-TSS (NM_001039580) 88 NM_001039580 79884 Hs.61271 NM_001039580 ENSG00000164114 MAP9 ASAP microtubule associated protein 9 protein-coding chr13-294 chr13 98004223 98004433 + 19.6 0.000 intron (NM_002271, intron 16 of 28) intron (NM_002271, intron 16 of 28) 50653 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr17-1349 chr17 44355681 44355891 + 19.4 0.000 exon (NM_198475, exon 7 of 8) exon (NM_198475, exon 7 of 8) 8067 NM_198475 284069 Hs.154001 NM_198475 ENSG00000161682 FAM171A2 - family with sequence similarity 171 member A2 protein-coding chr7-1104 chr7 41067626 41067836 + 19.4 0.000 Intergenic Intergenic -33873 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr5-1784 chr5 41527434 41527644 + 19.4 0.000 Intergenic MER41B|LTR|ERV1 -16938 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding chr4-616 chr4 127880587 127880797 + 19.4 0.000 promoter-TSS (NM_001190799) promoter-TSS (NM_001190799) -201 NM_001190799 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding chr12-966 chr12 2893030 2893240 + 19.4 0.000 intron (NM_003324, intron 1 of 10) AluJb|SINE|Alu 2244 NM_001160408 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 TUB like protein 3 protein-coding chr1-1148 chr1 3495596 3495806 + 19.4 0.000 intron (NM_001409, intron 30 of 36) intron (NM_001409, intron 30 of 36) 41036 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr8-385 chr8 28183729 28183939 + 19.4 0.000 intron (NM_018091, intron 14 of 14) intron (NM_018091, intron 14 of 14) 90695 NM_018091 55140 Hs.491336 NM_018091 ENSG00000134014 ELP3 KAT9 elongator acetyltransferase complex subunit 3 protein-coding chr3-1201 chr3 27559913 27560123 + 19.4 0.000 Intergenic Intergenic -75634 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr1-1618 chr1 117929193 117929403 + 19.4 0.000 promoter-TSS (NM_006784) promoter-TSS (NM_006784) 323 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr17-1661 chr17 68391764 68391974 + 19.4 0.000 intron (NM_001352899, intron 9 of 12) intron (NM_001352899, intron 9 of 12) -21754 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr2-1100 chr2 75606141 75606351 + 19.4 0.000 Intergenic Intergenic -36527 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr12-866 chr12 46473743 46473953 + 19.4 0.000 intron (NR_125380, intron 3 of 3) intron (NR_125380, intron 3 of 3) 89741 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr9-861 chr9 37840655 37840865 + 19.4 0.000 intron (NM_001286810, intron 2 of 6) Tigger3b|DNA|TcMar-Tigger 39963 NM_024345 79269 Hs.118394 NM_024345 ENSG00000122741 DCAF10 WDR32 DDB1 and CUL4 associated factor 10 protein-coding chr2-596 chr2 237662772 237662982 + 19.4 0.000 intron (NM_001137550, intron 1 of 23) MER66B|LTR|ERV1 -29287 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr12-1415 chr12 42129791 42130001 + 19.4 0.000 intron (NM_173601, intron 1 of 7) intron (NM_173601, intron 1 of 7) 14978 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr19-856 chr19 573355 573565 + 19.4 0.000 intron (NM_198589, intron 1 of 7) intron (NM_198589, intron 1 of 7) 864 NM_001728 682 Hs.501293 NM_001728 ENSG00000172270 BSG 5F7|CD147|EMMPRIN|EMPRIN|OK|SLC7A11|TCSF basigin (Ok blood group) protein-coding chr21-158 chr21 42002512 42002722 + 19.4 0.000 intron (NM_001320731, intron 2 of 3) intron (NM_001320731, intron 2 of 3) -6577 NR_119384 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA chr9-987 chr9 136572061 136572271 + 19.4 0.000 Intergenic Intergenic 24324 NR_121577 101928483 Hs.170035 NR_121577 NALT1 LINC01573|MIR4674HG|NALT|TCONS_l2_00029132 NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 ncRNA chr11-1012 chr11 57335904 57336114 + 19.4 0.000 promoter-TSS (NM_003146) promoter-TSS (NM_003146) -117 NM_003146 6749 Hs.523680 NM_003146 ENSG00000149136 SSRP1 FACT|FACT80|T160 structure specific recognition protein 1 protein-coding chr4-849 chr4 38190855 38191065 + 19.4 0.000 Intergenic Intergenic 71006 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr19-1121 chr19 52942810 52943020 + 19.4 0.000 promoter-TSS (NR_037805) promoter-TSS (NR_037805) -321 NR_037805 399669 Hs.745445 NM_203307 ENSG00000213801 ZNF321P ZNF321 zinc finger protein 321, pseudogene pseudo chr1-1083 chr1 26021866 26022076 + 19.4 0.000 5' UTR (NM_004455, exon 1 of 11) 5' UTR (NM_004455, exon 1 of 11) 196 NM_004455 2134 Hs.150956 NM_004455 ENSG00000158008 EXTL1 EXTL exostosin like glycosyltransferase 1 protein-coding chr7-729 chr7 44824844 44825054 + 19.4 0.000 Intergenic Intergenic 23177 NM_201436 94239 Hs.488189 NM_012412 ENSG00000105968 H2AFV H2A.Z-2|H2AV H2A histone family member V protein-coding chr1-1262 chr1 3533590 3533800 + 19.4 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) 27095 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr5-567 chr5 74639900 74640110 + 19.4 0.000 promoter-TSS (NM_001292004) promoter-TSS (NM_001292004) -18 NM_001292004 3074 Hs.69293 NM_000521 ENSG00000049860 HEXB ENC-1AS|HEL-248|HEL-S-111 hexosaminidase subunit beta protein-coding chr3-954 chr3 14425739 14425949 + 19.4 0.000 intron (NM_001134367, intron 2 of 14) intron (NM_001134367, intron 2 of 14) 23238 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr19-745 chr19 40715816 40716026 + 19.4 0.000 promoter-TSS (NM_001142555) promoter-TSS (NM_001142555) -802 NM_001142555 79934 Hs.130712 NM_024876 ENSG00000123815 COQ8B ADCK4|NPHS9 coenzyme Q8B protein-coding chr1-2699 chr1 213070422 213070632 + 19.4 0.000 intron (NM_001136138, intron 1 of 13) MER57B1|LTR|ERV1 19286 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr1-980 chr1 111228600 111228810 + 19.4 0.000 intron (NM_001025197, intron 1 of 9) intron (NM_001025197, intron 1 of 9) 992 NM_004000 1117 Hs.514840 NM_004000 ENSG00000064886 CHI3L2 CHIL2|YKL-39|YKL39 chitinase 3 like 2 protein-coding chr3-1243 chr3 139302354 139302564 + 19.4 0.000 Intergenic Intergenic -41535 NM_020191 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr12-1539 chr12 89566768 89566978 + 19.4 0.000 Intergenic Intergenic -40611 NM_001199782 100528030 Hs.25130 NM_001199781 ENSG00000259075 POC1B-GALNT4 GALNT4|GalNAc-T4 POC1B-GALNT4 readthrough protein-coding chr10-942 chr10 24894376 24894586 + 19.4 0.000 intron (NM_020200, intron 3 of 8) intron (NM_020200, intron 3 of 8) 58125 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr17-1790 chr17 77875096 77875306 + 19.4 0.000 Intergenic Intergenic 8886 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr5-972 chr5 180785403 180785613 + 19.4 0.000 3' UTR (NM_001364381, exon 3 of 3) 3' UTR (NM_001364381, exon 3 of 3) 17298 NM_001364392 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr11-626 chr11 77878396 77878606 + 19.4 0.000 TTS (NM_033547) TTS (NM_033547) 37363 NM_001363564 28971 Hs.745040 NM_024684 ENSG00000087884 AAMDC C11orf67|CK067|PTD015 adipogenesis associated Mth938 domain containing protein-coding chr7-1963 chr7 113197398 113197608 + 19.4 0.000 Intergenic L2b|LINE|L2 -78921 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding chr3-1931 chr3 192857347 192857557 + 19.4 0.000 intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) 60404 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr7-1037 chr7 87414180 87414390 + 19.4 0.000 intron (NM_018849, intron 21 of 27) MLT1O|LTR|ERVL-MaLR 61395 NM_018849 5244 Hs.654403 NM_000443 ENSG00000005471 ABCB4 ABC21|GBD1|ICP3|MDR2|MDR2/3|MDR3|PFIC-3|PGY3 ATP binding cassette subfamily B member 4 protein-coding chr1-3294 chr1 246534361 246534571 + 19.4 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -10179 NR_040002 255654 Hs.407570 NR_040002 ENSG00000242042 LINC01743 - long intergenic non-protein coding RNA 1743 ncRNA chr21-202 chr21 45378266 45378476 + 19.4 0.000 Intergenic Intergenic -26794 NM_130445 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr2-2013 chr2 74333201 74333411 + 19.4 0.000 intron (NM_133478, intron 4 of 30) intron (NM_133478, intron 4 of 30) 10110 NM_133478 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr17-451 chr17 78214076 78214286 + 19.4 0.000 promoter-TSS (NM_001012271) promoter-TSS (NM_001012271) -72 NM_001168 332 Hs.744872 NM_001168 ENSG00000089685 BIRC5 API4|EPR-1 baculoviral IAP repeat containing 5 protein-coding chr8-410 chr8 66774969 66775179 + 19.4 0.000 promoter-TSS (NM_170709) promoter-TSS (NM_170709) -107 NM_013257 23678 Hs.613417 NM_013257 ENSG00000104205 SGK3 CISK|SGK2|SGKL serum/glucocorticoid regulated kinase family member 3 protein-coding chr14-652 chr14 23548690 23548900 + 19.4 0.000 intron (NM_033400, intron 1 of 9) intron (NM_033400, intron 1 of 9) 2970 NM_033400 85446 Hs.508937 NM_033400 ENSG00000136367 ZFHX2 MARSIS|ZFH-5|ZFH5|ZNF409 zinc finger homeobox 2 protein-coding chr2-3553 chr2 25651189 25651399 + 19.4 0.000 intron (NM_033147, intron 2 of 19) MIRb|SINE|MIR -1072 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr16-871 chr16 14186101 14186311 + 19.4 0.000 promoter-TSS (NM_001365415) promoter-TSS (NM_001365415) -480 NM_001365415 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr15-569 chr15 87764901 87765111 + 19.4 0.000 Intergenic Intergenic 181262 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr1-1521 chr1 55402194 55402404 + 19.4 0.000 Intergenic L2c|LINE|L2 176658 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr2-1543 chr2 191635685 191635895 + 19.4 0.000 Intergenic Intergenic -42282 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr6-743 chr6 25359554 25359764 + 19.4 0.000 intron (NM_001173977, intron 2 of 36) intron (NM_001173977, intron 2 of 36) 80285 NM_001173977 55604 Hs.649550 NM_017640 ENSG00000079691 CARMIL1 CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5 capping protein regulator and myosin 1 linker 1 protein-coding chr5-1158 chr5 172955670 172955880 + 19.4 0.000 non-coding (NR_026682, exon 4 of 4) non-coding (NR_026682, exon 4 of 4) -2954 NM_001317981 51121 Hs.546390 NM_016093 ENSG00000037241 RPL26L1 RPL26P1 ribosomal protein L26 like 1 protein-coding chr16-751 chr16 8867407 8867617 + 19.4 0.000 promoter-TSS (NM_001278264) promoter-TSS (NM_001278264) -84 NM_001278264 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr10-415 chr10 43648783 43648993 + 19.4 0.000 promoter-TSS (NM_001005368) promoter-TSS (NM_001005368) -7 NM_006973 7580 Hs.522885 NM_006973 ENSG00000169740 ZNF32 KOX30 zinc finger protein 32 protein-coding chr3-488 chr3 180912375 180912585 + 19.4 0.000 promoter-TSS (NM_001013439) promoter-TSS (NM_001013439) -190 NM_005087 8087 Hs.478407 NM_005087 ENSG00000114416 FXR1 FXR1P FMR1 autosomal homolog 1 protein-coding chr7-806 chr7 128455663 128455873 + 19.4 0.000 promoter-TSS (NM_013332) promoter-TSS (NM_013332) -62 NM_001098786 29923 Hs.706124 NM_013332 ENSG00000135245 HILPDA C7orf68|HIG-2|HIG2 hypoxia inducible lipid droplet associated protein-coding chr2-763 chr2 240435689 240435899 + 19.4 0.000 5' UTR (NM_002081, exon 1 of 9) 5' UTR (NM_002081, exon 1 of 9) 131 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chrX-344 chrX 10945620 10945830 + 19.4 0.000 Intergenic Intergenic -112042 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr1-1008 chr1 92804903 92805113 + 19.4 0.000 Intergenic AluJb|SINE|Alu -12598 NM_005665 7813 Hs.594434 NM_005665 ENSG00000067208 EVI5 EVI-5|NB4S ecotropic viral integration site 5 protein-coding chr5-1077 chr5 1517034 1517244 + 19.4 0.000 intron (NM_024830, intron 1 of 13) intron (NM_024830, intron 1 of 13) -6283 NR_106723 102466103 NR_106723 ENSG00000273742 MIR6075 hsa-mir-6075 microRNA 6075 ncRNA chr7-931 chr7 17680173 17680383 + 19.4 0.000 Intergenic Intergenic -121369 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr15-279 chr15 50686445 50686655 + 19.4 0.000 non-coding (NR_149153, exon 1 of 38) non-coding (NR_149153, exon 1 of 38) 247 NM_001301212 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr1-1487 chr1 197683858 197684068 + 19.4 0.000 intron (NR_125340, intron 3 of 19) intron (NR_125340, intron 3 of 19) 91517 NM_001300858 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr16-1018 chr16 85675625 85675835 + 19.4 0.000 TTS (NM_016095) TTS (NM_016095) 13224 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr12-660 chr12 94290014 94290224 + 19.4 0.000 intron (NM_005761, intron 23 of 30) intron (NM_005761, intron 23 of 30) 27598 NR_037687 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr12-961 chr12 131710829 131711039 + 19.4 0.000 promoter-TSS (NM_001261411) promoter-TSS (NM_001261411) -156 NM_001261411 6433 Hs.308171 NM_004592 ENSG00000061936 SFSWAP SFRS8|SWAP splicing factor SWAP protein-coding chr12-614 chr12 110403493 110403703 + 19.4 0.000 exon (NM_016238, exon 1 of 11) exon (NM_016238, exon 1 of 11) 132 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr3-876 chr3 185175567 185175777 + 19.4 0.000 intron (NR_038990, intron 1 of 6) intron (NR_038990, intron 1 of 6) 12771 NR_038990 339926 Hs.567848 NR_038990 ENSG00000223358 EHHADH-AS1 - EHHADH antisense RNA 1 ncRNA chr22-407 chr22 36467973 36468183 + 19.4 0.000 intron (NM_012473, intron 3 of 3) intron (NM_012473, intron 3 of 3) 13562 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr4-1002 chr4 185112176 185112386 + 19.4 0.000 Intergenic Intergenic -30985 NM_001151 291 Hs.246506 NM_001151 ENSG00000151729 SLC25A4 AAC1|ANT|ANT 1|ANT1|MTDPS12|MTDPS12A|PEO2|PEO3|PEOA2|T1 solute carrier family 25 member 4 protein-coding chr17-1392 chr17 29124122 29124332 + 19.4 0.000 intron (NM_001346767, intron 2 of 39) intron (NM_001346767, intron 2 of 39) 16162 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr8-502 chr8 123273681 123273891 + 19.4 0.000 intron (NR_037873, intron 1 of 3) intron (NR_037873, intron 1 of 3) 500 NM_001204180 100533106 Hs.707401 NM_001204180 ENSG00000259305 ZHX1-C8orf76 - ZHX1-C8orf76 readthrough protein-coding chrX-110 chrX 101098031 101098241 + 19.4 0.000 promoter-TSS (NM_001318521) promoter-TSS (NM_001318521) -46 NM_001318521 2491 Hs.348920 NM_006733 ENSG00000102384 CENPI CENP-I|FSHPRH1|LRPR1 centromere protein I protein-coding chr19-1395 chr19 18495463 18495673 + 19.4 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 26502 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr12-821 chr12 19547305 19547515 + 19.4 0.000 Intergenic Intergenic 106811 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr20-343 chr20 62144421 62144631 + 19.4 0.000 intron (NM_198935, intron 1 of 10) CpG-17964 757 NR_125980 26039 Hs.154429 NM_015558 ENSG00000184402 SS18L1 CREST|LP2261 SS18L1 subunit of BAF chromatin remodeling complex protein-coding chr4-601 chr4 153083452 153083662 + 19.4 0.000 Intergenic Intergenic -68777 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr11-830 chr11 68509031 68509241 + 19.4 0.000 intron (NR_147971, intron 2 of 24) intron (NR_147971, intron 2 of 24) 48384 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr6-664 chr6 79545091 79545301 + 19.4 0.000 Intergenic Intergenic -7766 NM_181714 167691 Hs.21945 NM_181714 ENSG00000135338 LCA5 C6orf152 lebercilin LCA5 protein-coding chr1-3948 chr1 109619568 109619778 + 19.4 0.000 promoter-TSS (NM_139156) promoter-TSS (NM_139156) -140 NM_139156 271 Hs.82927 NM_004037 ENSG00000116337 AMPD2 PCH9|SPG63 adenosine monophosphate deaminase 2 protein-coding chr19-1885 chr19 41851876 41852086 + 19.4 0.000 3' UTR (NM_001040283, exon 9 of 9) 3' UTR (NM_001040283, exon 9 of 9) 6939 NM_001040283 63946 Hs.350507 NM_033052 ENSG00000142025 DMRTC2 - DMRT like family C2 protein-coding chr10-673 chr10 100286150 100286360 + 19.4 0.000 5' UTR (NM_001001342, exon 1 of 4) 5' UTR (NM_001001342, exon 1 of 4) 109 NM_001001342 282991 Hs.34906 NM_173809 ENSG00000196072 BLOC1S2 BLOS2|BORCS2|CEAP|CEAP11 biogenesis of lysosomal organelles complex 1 subunit 2 protein-coding chr2-2562 chr2 220682677 220682887 + 19.4 0.000 Intergenic Intergenic -776217 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr16-493 chr16 85245796 85246006 + 19.4 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -37057 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr8-298 chr8 22141835 22142045 + 19.4 0.000 promoter-TSS (NM_001316965) promoter-TSS (NM_001316965) -33 NM_025232 80346 Hs.289063 NM_025232 ENSG00000168476 REEP4 C8orf20|PP432|Yip2c receptor accessory protein 4 protein-coding chr4-750 chr4 155005491 155005701 + 19.4 0.000 Intergenic Intergenic -203040 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr7-809 chr7 133853746 133853956 + 19.4 0.000 intron (NM_021807, intron 11 of 17) intron (NM_021807, intron 11 of 17) -28963 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr14-654 chr14 35215301 35215511 + 19.4 0.000 intron (NM_014672, intron 5 of 7) intron (NM_014672, intron 5 of 7) -63152 NM_001282234 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr22-194 chr22 46737810 46738020 + 19.4 0.000 intron (NM_022766, intron 1 of 12) CpG 337 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr8-732 chr8 134720530 134720740 + 19.4 0.000 Intergenic Intergenic -7604 NM_001174157 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding chr7-987 chr7 73850884 73851094 + 19.4 0.000 Intergenic Intergenic -8473 NM_152559 155368 Hs.647042 NM_152559 ENSG00000165171 METTL27 WBSCR27 methyltransferase like 27 protein-coding chr19-1768 chr19 15283537 15283747 + 19.4 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) -3191 NM_058243 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr16-1332 chr16 28194027 28194237 + 19.4 0.000 intron (NM_015171, intron 1 of 23) MIRb|SINE|MIR 17833 NM_001270940 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr3-473 chr3 138594168 138594378 + 19.4 0.000 promoter-TSS (NM_001288967) promoter-TSS (NM_001288967) -13 NM_001288967 80321 Hs.531962 NM_024491 ENSG00000114107 CEP70 BITE centrosomal protein 70 protein-coding chr17-989 chr17 44599355 44599565 + 19.4 0.000 Intergenic Intergenic 41976 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr17-725 chr17 21551560 21551770 + 19.4 0.000 promoter-TSS (NR_160801) promoter-TSS (NR_160801) 13 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr7-645 chr7 44233605 44233815 + 19.4 0.000 intron (NM_172082, intron 14 of 19) intron (NM_172082, intron 14 of 19) 32732 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr22-622 chr22 31230583 31230793 + 19.4 0.000 intron (NM_005569, intron 2 of 15) intron (NM_005569, intron 2 of 15) -17696 NM_016733 3985 Hs.474596 NM_005569 ENSG00000182541 LIMK2 - LIM domain kinase 2 protein-coding chr4-437 chr4 498995 499205 + 19.4 0.000 promoter-TSS (NM_133474) promoter-TSS (NM_133474) 56 NM_133474 170960 Hs.428360 NM_133474 ENSG00000182903 ZNF721 - zinc finger protein 721 protein-coding chr5-283 chr5 142108739 142108949 + 19.4 0.000 promoter-TSS (NM_030571) promoter-TSS (NM_030571) 65 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr10-1154 chr10 112958348 112958558 + 19.4 0.000 intron (NM_001198530, intron 3 of 10) intron (NM_001198530, intron 3 of 10) 8203 NM_001198530 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr7-487 chr7 139035992 139036202 + 19.4 0.000 promoter-TSS (NM_080660) promoter-TSS (NM_080660) -55 NM_080660 92092 Hs.512833 NM_080660 ENSG00000146858 ZC3HAV1L C7orf39 zinc finger CCCH-type containing, antiviral 1 like protein-coding chr19-963 chr19 37655947 37656157 + 19.4 0.000 promoter-TSS (NM_001320671) promoter-TSS (NM_001320671) 209 NM_001320668 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding chr4-832 chr4 1940118 1940328 + 19.4 0.000 3' UTR (NM_007331, exon 11 of 11) 3' UTR (NM_007331, exon 11 of 11) -34413 NR_003004 677770 Hs.676951 NR_003004 ENSG00000249784 SCARNA22 ACA11 small Cajal body-specific RNA 22 ncRNA chr16-589 chr16 87306131 87306341 + 19.4 0.000 intron (NM_001256917, intron 3 of 4) L1MC5|LINE|L1 11156 NM_001195125 100506581 Hs.729380 NM_001195124 ENSG00000260456 C16orf95 - chromosome 16 open reading frame 95 protein-coding chr11-904 chr11 64864564 64864774 + 19.4 0.000 intron (NM_006795, intron 2 of 4) intron (NM_006795, intron 2 of 4) 13940 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr2-1611 chr2 187372400 187372610 + 19.4 0.000 intron (NM_001369434, intron 9 of 15) Charlie30a|DNA|hAT-Charlie 75747 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr12-651 chr12 51532017 51532227 + 19.4 0.000 Intergenic Intergenic -59111 NM_001330260 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr4-1167 chr4 771709 771919 + 19.4 0.000 TTS (NM_006315) TTS (NM_006315) 10034 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr9-868 chr9 77999311 77999521 + 19.4 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 32395 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr1-975 chr1 53238623 53238833 + 19.4 0.000 promoter-TSS (NM_002370) promoter-TSS (NM_002370) 118 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 - uncharacterized LOC100507564 ncRNA chr12-960 chr12 123089741 123089951 + 19.4 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) 8462 NR_038290 100507091 Hs.683912 NR_038290 ENSG00000251497 PITPNM2-AS1 - PITPNM2 antisense RNA 1 ncRNA chr4-718 chr4 137960895 137961105 + 19.4 0.000 Intergenic Intergenic -128014 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr13-553 chr13 19587756 19587966 + 19.4 0.000 intron (NR_046988, intron 1 of 1) intron (NR_046988, intron 1 of 1) 743 NR_046988 100874136 NR_046988 LINC00350 - long intergenic non-protein coding RNA 350 ncRNA chr20-302 chr20 38127313 38127523 + 19.4 0.000 TTS (NM_001323316) TTS (NM_001323316) 37852 NM_198951 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr3-1199 chr3 27357728 27357938 + 19.4 0.000 intron (NM_152534, intron 2 of 38) intron (NM_152534, intron 2 of 38) 11550 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr14-900 chr14 55588250 55588460 + 19.4 0.000 intron (NM_004986, intron 1 of 41) Tigger2b_Pri|DNA|TcMar-Tigger 8148 NM_001079521 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding chr14-1088 chr14 47194093 47194303 + 19.4 0.000 intron (NM_001113498, intron 3 of 16) intron (NM_001113498, intron 3 of 16) 149048 NR_103766 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr12-753 chr12 54423309 54423519 + 19.4 0.000 intron (NR_120488, intron 1 of 2) intron (NR_120488, intron 1 of 2) 3629 NR_120488 102724050 Hs.670941 NR_120486 ENSG00000258137 LOC102724050 - uncharacterized LOC102724050 ncRNA chr18-166 chr18 36067415 36067625 + 19.4 0.000 promoter-TSS (NM_018170) promoter-TSS (NM_018170) 39 NM_001303412 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr1-1550 chr1 246689706 246689916 + 19.4 0.000 Intergenic LTR41|LTR|ERVL -34598 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr10-725 chr10 124320255 124320465 + 19.4 0.000 Intergenic Intergenic 98563 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr10-412 chr10 18659287 18659497 + 19.4 0.000 promoter-TSS (NM_001351116) promoter-TSS (NM_001351116) -39 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding chr18-417 chr18 57705179 57705389 + 19.4 0.000 intron (NM_005603, intron 3 of 27) intron (NM_005603, intron 3 of 27) 74953 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr3-1100 chr3 43708051 43708261 + 19.4 0.000 intron (NR_158560, intron 3 of 5) intron (NR_158560, intron 3 of 5) -16562 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr4-694 chr4 10623336 10623546 + 19.4 0.000 intron (NM_052964, intron 2 of 18) MIRb|SINE|MIR 61327 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr16-633 chr16 88705302 88705512 + 19.4 0.000 intron (NM_178841, intron 1 of 5) intron (NM_178841, intron 1 of 5) 1001 NM_001171815 115992 Hs.513804 NM_178841 ENSG00000158717 RNF166 - ring finger protein 166 protein-coding chr12-731 chr12 107094035 107094245 + 19.4 0.000 promoter-TSS (NM_004075) promoter-TSS (NM_004075) -591 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr2-2281 chr2 28750465 28750675 + 19.4 0.000 Intergenic MIR|SINE|MIR -1178 NM_206876 5500 Hs.702907 NM_002709 ENSG00000213639 PPP1CB HEL-S-80p|NSLH2|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1 catalytic subunit beta protein-coding chr3-1849 chr3 101836975 101837185 + 19.4 0.000 intron (NM_001005474, intron 2 of 12) intron (NM_001005474, intron 2 of 12) 9090 NM_001005474 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr3-1153 chr3 66428908 66429118 + 19.4 0.000 intron (NM_015541, intron 3 of 18) intron (NM_015541, intron 3 of 18) 71408 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr10-589 chr10 78336308 78336518 + 19.4 0.000 Intergenic LTR33|LTR|ERVL 69071 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr2-979 chr2 62472280 62472490 + 19.4 0.000 Intergenic Intergenic 33810 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr16-647 chr16 68264070 68264280 + 19.4 0.000 promoter-TSS (NM_001076785) promoter-TSS (NM_001076785) -351 NM_003983 9057 Hs.679580 NM_003983 ENSG00000103064 SLC7A6 LAT-2|LAT3|y+LAT-2 solute carrier family 7 member 6 protein-coding chr10-490 chr10 79404258 79404468 + 19.4 0.000 intron (NM_153367, intron 2 of 3) intron (NM_153367, intron 2 of 3) 41261 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr21-93 chr21 26169239 26169449 + 19.4 0.000 intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) 1426 NM_201414 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr16-572 chr16 71637528 71637738 + 19.4 0.000 intron (NM_001017967, intron 2 of 2) intron (NM_001017967, intron 2 of 2) 11449 NM_001271329 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chr20-397 chr20 46364040 46364250 + 19.4 0.000 intron (NM_001281460, intron 1 of 10) CpG 280 NM_015945 51006 Hs.593344 NM_015945 ENSG00000080189 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 member C2 protein-coding chr12-922 chr12 69904899 69905109 + 19.4 0.000 intron (NM_182530, intron 11 of 24) intron (NM_182530, intron 11 of 24) 79777 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr22-663 chr22 42949090 42949300 + 19.4 0.000 intron (NM_001184970, intron 1 of 10) MIRc|SINE|MIR -2154 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr7-1378 chr7 127514583 127514793 + 19.4 0.000 Intergenic Intergenic 37805 NR_110024 100506682 Hs.148450 NR_110024 ENSG00000226770 LOC100506682 - uncharacterized LOC100506682 ncRNA chr4-758 chr4 3498381 3498591 + 19.4 0.000 intron (NM_001363811, intron 6 of 7) intron (NM_001363811, intron 6 of 7) 13942 NM_001256896 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr2-1304 chr2 1732208 1732418 + 19.4 0.000 intron (NM_012293, intron 1 of 22) L1MEc|LINE|L1 12202 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr16-734 chr16 88821362 88821572 + 19.4 0.000 intron (NM_001323544, intron 13 of 14) intron (NM_001323544, intron 13 of 14) -9539 NM_001030018 353 Hs.28914 NM_000485 ENSG00000198931 APRT AMP|APRTD adenine phosphoribosyltransferase protein-coding chr6-895 chr6 118705711 118705921 + 19.4 0.000 intron (NM_001178035, intron 1 of 13) intron (NM_001178035, intron 1 of 13) 4259 NM_001178035 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr1-1726 chr1 55071628 55071838 + 19.4 0.000 intron (NM_015306, intron 67 of 67) intron (NM_015306, intron 67 of 67) 31511 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr2-1258 chr2 28716425 28716635 + 19.4 0.000 intron (NR_145832, intron 1 of 1) intron (NR_145832, intron 1 of 1) 19675 NR_145832 100505774 Hs.595909 NR_145832 ENSG00000226833 LOC100505774 - uncharacterized LOC100505774 ncRNA chr3-1038 chr3 171192466 171192676 + 19.4 0.000 intron (NM_001161563, intron 5 of 31) intron (NM_001161563, intron 5 of 31) -85812 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr10-856 chr10 80203569 80203779 + 19.4 0.000 intron (NM_001278408, intron 1 of 16) intron (NM_001278408, intron 1 of 16) 817 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr7-402 chr7 99427124 99427334 + 19.4 0.000 intron (NM_001198879, intron 6 of 8) SVA_D|Retroposon|SVA 11569 NM_015545 26024 Hs.632313 NM_015545 ENSG00000106246 PTCD1 - pentatricopeptide repeat domain 1 protein-coding chrX-262 chrX 24190745 24190955 + 19.4 0.000 intron (NM_001178084, intron 3 of 7) MIRb|SINE|MIR 41121 NM_001178084 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr12-1115 chr12 40226757 40226967 + 19.4 0.000 intron (NM_198578, intron 2 of 50) intron (NM_198578, intron 2 of 50) 1865 NM_198578 120892 Hs.187636 NM_198578 ENSG00000188906 LRRK2 AURA17|DARDARIN|PARK8|RIPK7|ROCO2 leucine rich repeat kinase 2 protein-coding chr17-1306 chr17 60720985 60721195 + 19.4 0.000 intron (NM_001330413, intron 5 of 25) intron (NM_001330413, intron 5 of 25) 43239 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr4-991 chr4 141059212 141059422 + 19.4 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 74152 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr2-971 chr2 237702797 237703007 + 19.4 0.000 intron (NM_001137551, intron 1 of 11) L1MC5|LINE|L1 10697 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr19-1094 chr19 46155294 46155504 + 19.4 0.000 intron (NM_001002915, intron 2 of 4) L1MB5|LINE|L1 7161 NM_001135113 147920 Hs.99376 NM_001002915 ENSG00000204866 IGFL2 UNQ645|VPRI645 IGF like family member 2 protein-coding chr11-2141 chr11 44563905 44564115 + 19.4 0.000 Intergenic MIRb|SINE|MIR -1653 NM_001024844 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr10-1454 chr10 73993139 73993349 + 19.4 0.000 Intergenic Intergenic -4870 NM_014000 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr3-1417 chr3 175260436 175260646 + 19.4 0.000 intron (NM_207015, intron 4 of 13) intron (NM_207015, intron 4 of 13) 10555 NR_046713 100874244 Hs.581176 NR_046713 NAALADL2-AS2 - NAALADL2 antisense RNA 2 ncRNA chr19-1290 chr19 611613 611823 + 19.4 0.000 intron (NM_001194, intron 5 of 7) L1MB7|LINE|L1 21819 NM_005035 5442 Hs.254113 NM_005035 ENSG00000099821 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL RNA polymerase mitochondrial protein-coding chr15-524 chr15 48617601 48617811 + 19.4 0.000 intron (NM_000138, intron 2 of 65) intron (NM_000138, intron 2 of 65) 28082 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr12-1306 chr12 6553120 6553330 + 19.4 0.000 intron (NR_036467, intron 1 of 9) intron (NR_036467, intron 1 of 9) 2817 NM_001039670 25900 Hs.15243 NM_015438 ENSG00000010295 IFFO1 HOM-TES-103|IFFO intermediate filament family orphan 1 protein-coding chr19-930 chr19 12156653 12156863 + 19.4 0.000 promoter-TSS (NM_145233) promoter-TSS (NM_145233) -24 NM_145233 90589 Hs.732736 NM_145233 ENSG00000257591 ZNF625 - zinc finger protein 625 protein-coding chr7-1451 chr7 78151488 78151698 + 19.4 0.000 intron (NM_001301128, intron 15 of 20) intron (NM_001301128, intron 15 of 20) -195649 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr15-657 chr15 62606445 62606655 + 19.4 0.000 Intergenic Intergenic 38631 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr4-529 chr4 126071735 126071945 + 19.4 0.000 Intergenic Intergenic 564581 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr7-1660 chr7 82169767 82169977 + 19.4 0.000 intron (NM_000722, intron 4 of 38) intron (NM_000722, intron 4 of 38) 160695 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr10-996 chr10 69851264 69851474 + 19.4 0.000 intron (NM_001368898, intron 3 of 33) L2a|LINE|L2 49463 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr22-612 chr22 18023428 18023638 + 19.3 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) 1028 NM_015241 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr1-1898 chr1 184982195 184982405 + 19.3 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -7792 NM_052966 116496 Hs.518662 NM_052966 ENSG00000135842 NIBAN1 C1orf24|FAM129A|GIG39|NIBAN niban apoptosis regulator 1 protein-coding chr13-368 chr13 50486157 50486367 + 19.3 0.000 intron (NR_109974, intron 4 of 6) intron (NR_109974, intron 4 of 6) 41187 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr2-1555 chr2 237235444 237235654 + 19.3 0.000 Intergenic ERVL-E-int|LTR|ERVL 149660 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr12-1232 chr12 15774926 15775136 + 19.3 0.000 intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 14357 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr1-1168 chr1 100265976 100266186 + 19.3 0.000 promoter-TSS (NR_110434) promoter-TSS (NR_110434) -77 NM_003729 8634 Hs.484222 NM_003729 ENSG00000137996 RTCA RPC|RTC1|RTCD1 RNA 3'-terminal phosphate cyclase protein-coding chr20-360 chr20 1719056 1719266 + 19.3 0.000 Intergenic LTR8|LTR|ERV1 60585 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr8-1430 chr8 116587278 116587488 + 19.3 0.000 Intergenic Intergenic -64717 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr3-803 chr3 8964944 8965154 + 19.3 0.000 Intergenic Intergenic -1577 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr5-425 chr5 122163506 122163716 + 19.3 0.000 intron (NM_001195535, intron 1 of 2) intron (NM_001195535, intron 1 of 2) 3435 NM_001195535 100505841 Hs.733368 NM_001195535 LOC100505841 - zinc finger protein 474-like protein-coding chr15-274 chr15 84633353 84633563 + 19.3 0.000 intron (NR_003654, intron 1 of 3) CpG 1998 NR_004859 54581 Hs.658114 NM_022050 SCAND2P SCAND2 SCAN domain containing 2 pseudogene pseudo chr10-495 chr10 124091717 124091927 + 19.3 0.000 intron (NM_001270765, intron 1 of 5) CpG 584 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr19-1607 chr19 39401503 39401713 + 19.3 0.000 TTS (NR_133915) TTS (NR_133915) -5239 NM_003407 7538 Hs.534052 NM_003407 ENSG00000128016 ZFP36 G0S24|GOS24|NUP475|RNF162A|TIS11|TTP|zfp-36 ZFP36 ring finger protein protein-coding chr14-938 chr14 29222828 29223038 + 19.3 0.000 Intergenic Intergenic -437146 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr5-429 chr5 158609945 158610155 + 19.3 0.000 Intergenic Intergenic -200277 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr1-1153 chr1 26799659 26799869 + 19.3 0.000 Intergenic Intergenic 11576 NM_001202554 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr4-914 chr4 182212368 182212578 + 19.3 0.000 Intergenic Intergenic -30929 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr4-547 chr4 183118807 183119017 + 19.3 0.000 intron (NM_024949, intron 1 of 22) intron (NM_024949, intron 1 of 22) 19655 NM_024949 80014 Hs.333179 NM_024949 ENSG00000151718 WWC2 BOMB WW and C2 domain containing 2 protein-coding chr11-1121 chr11 33028169 33028379 + 19.3 0.000 intron (NM_001077242, intron 3 of 8) intron (NM_001077242, intron 3 of 8) -11298 NM_018393 55346 Hs.655341 NM_018393 ENSG00000176148 TCP11L1 dJ85M6.3 t-complex 11 like 1 protein-coding chr12-921 chr12 68479205 68479415 + 19.3 0.000 Intergenic Intergenic -27826 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr16-550 chr16 87918516 87918726 + 19.3 0.000 intron (NM_001739, intron 2 of 6) intron (NM_001739, intron 2 of 6) 17908 NM_001367225 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr6-381 chr6 7267655 7267865 + 19.3 0.000 Intergenic Intergenic 45439 NM_003144 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr5-258 chr5 173056073 173056283 + 19.3 0.000 promoter-TSS (NM_001168393) promoter-TSS (NM_001168393) -174 NM_153607 153222 Hs.484195 NM_153607 ENSG00000164463 CREBRF C5orf41|LRF CREB3 regulatory factor protein-coding chr15-545 chr15 36612397 36612607 + 19.3 0.000 intron (NM_001290232, intron 1 of 10) intron (NM_001290232, intron 1 of 10) 17625 NM_001290232 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr20-263 chr20 7693843 7694053 + 19.3 0.000 Intergenic Intergenic 246510 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr20-663 chr20 109766 109976 + 19.3 0.000 Intergenic MER77|LTR|ERVL 22199 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr3-1165 chr3 134354102 134354312 + 19.3 0.000 Intergenic Intergenic 13655 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr2-998 chr2 187150700 187150910 + 19.3 0.000 Intergenic Intergenic 297447 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chrX-171 chrX 11759370 11759580 + 19.3 0.000 promoter-TSS (NM_006800) promoter-TSS (NM_006800) -172 NM_006800 10943 Hs.655288 NM_006800 ENSG00000005302 MSL3 MSL3L1 MSL complex subunit 3 protein-coding chr7-1372 chr7 115087483 115087693 + 19.3 0.000 intron (NR_120521, intron 1 of 3) intron (NR_120521, intron 1 of 3) 8630 NR_120521 102724386 Hs.352357 NR_120521 ENSG00000225535 LINC01393 - long intergenic non-protein coding RNA 1393 ncRNA chr2-577 chr2 27086442 27086652 + 19.3 0.000 promoter-TSS (NM_006488) promoter-TSS (NM_006488) -225 NM_006488 3795 Hs.567297 NM_000221 ENSG00000138030 KHK - ketohexokinase protein-coding chr2-787 chr2 171985137 171985347 + 19.3 0.000 Intergenic Intergenic -14711 NM_199227 254042 Hs.298250 NM_199227 ENSG00000172878 METAP1D MAP 1D|MAP1D|MetAP 1D|Metap1l methionyl aminopeptidase type 1D, mitochondrial protein-coding chr8-147 chr8 17246901 17247111 + 19.3 0.000 promoter-TSS (NM_001322092) promoter-TSS (NM_001322092) 48 NM_001363171 137492 Hs.343873 NM_152415 ENSG00000155975 VPS37A HCRP1|PQBP2|SPG53 VPS37A subunit of ESCRT-I protein-coding chr1-1043 chr1 39129560 39129770 + 19.3 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 45498 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr21-228 chr21 36023153 36023363 + 19.3 0.000 Intergenic Intergenic 17938 NR_110419 100996609 Hs.742062 NR_110419 LINC01436 - long intergenic non-protein coding RNA 1436 ncRNA chr8-875 chr8 133287478 133287688 + 19.3 0.000 intron (NM_006096, intron 1 of 15) intron (NM_006096, intron 1 of 15) 9669 NM_001258432 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr7-592 chr7 5303320 5303530 + 19.3 0.000 3' UTR (NM_001300847, exon 11 of 11) 3' UTR (NM_001300847, exon 11 of 11) 20482 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr13-164 chr13 29850545 29850755 + 19.3 0.000 promoter-TSS (NM_007106) promoter-TSS (NM_007106) -33 NM_007106 5412 Hs.145575 NM_007106 ENSG00000122042 UBL3 HCG-1|PNSC1 ubiquitin like 3 protein-coding chr12-550 chr12 116277578 116277788 + 19.3 0.000 promoter-TSS (NM_015335) promoter-TSS (NM_015335) -497 NM_015335 23389 Hs.603766 NM_015335 ENSG00000123066 MED13L MRFACD|PROSIT240|THRAP2|TRAP240L mediator complex subunit 13L protein-coding chr3-1055 chr3 14143916 14144126 + 19.3 0.000 TTS (NM_024334) TTS (NM_024334) 19081 NM_024334 79188 Hs.517817 NM_024334 ENSG00000170876 TMEM43 ARVC5|ARVD5|EDMD7|LUMA transmembrane protein 43 protein-coding chr12-1139 chr12 104577629 104577839 + 19.3 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -13899 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr20-437 chr20 50931469 50931679 + 19.3 0.000 promoter-TSS (NM_181442) promoter-TSS (NM_181442) -137 NM_015339 23394 Hs.293736 NM_015339 ENSG00000101126 ADNP ADNP1|HVDAS|MRD28 activity dependent neuroprotector homeobox protein-coding chr10-1134 chr10 24643027 24643237 + 19.3 0.000 intron (NM_001367447, intron 4 of 24) intron (NM_001367447, intron 4 of 24) -20289 NM_001367455 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr1-2929 chr1 35605120 35605330 + 19.3 0.000 intron (NM_002794, intron 5 of 5) intron (NM_002794, intron 5 of 5) 26312 NM_001199780 5690 Hs.471441 NM_002794 ENSG00000126067 PSMB2 HC7-I proteasome subunit beta 2 protein-coding chrX-321 chrX 152072439 152072649 + 19.3 0.000 Intergenic Intergenic 45395 NM_021049 4104 Hs.18048 NM_021049 MAGEA5 CT1.5|MAGE5|MAGEA4 MAGE family member A5 protein-coding chr12-1177 chr12 56164299 56164509 + 19.3 0.000 exon (NM_003075, exon 27 of 28) exon (NM_003075, exon 27 of 28) 6045 NM_021019 4637 Hs.632717 NM_021019 ENSG00000092841 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin light chain 6 protein-coding chr6-327 chr6 151240029 151240239 + 19.3 0.000 intron (NM_005100, intron 1 of 4) intron (NM_005100, intron 1 of 4) 167 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr3-945 chr3 171658995 171659205 + 19.3 0.000 intron (NM_002662, intron 21 of 26) intron (NM_002662, intron 21 of 26) 151383 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr1-3181 chr1 105485435 105485645 + 19.3 0.000 Intergenic LTR49-int|LTR|ERV1 133395 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr1-1577 chr1 24688589 24688799 + 19.3 0.000 Intergenic Intergenic 45115 NM_001366597 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr10-1601 chr10 44696600 44696810 + 19.3 0.000 Intergenic Intergenic -214611 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr12-378 chr12 113149641 113149851 + 19.3 0.000 promoter-TSS (NM_001144872) promoter-TSS (NM_001144872) -112 NM_001144872 387885 Hs.486856 NM_001144872 ENSG00000186710 CFAP73 CCDC42B|MIA2 cilia and flagella associated protein 73 protein-coding chr6-635 chr6 56724540 56724750 + 19.3 0.000 intron (NM_001144770, intron 3 of 94) intron (NM_001144770, intron 3 of 94) -81756 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr19-1191 chr19 46716055 46716265 + 19.3 0.000 exon (NM_001079880, exon 2 of 19) exon (NM_001079880, exon 2 of 19) 967 NM_001079881 25865 Hs.466987 NM_016457 ENSG00000105287 PRKD2 HSPC187|PKD2|nPKC-D2 protein kinase D2 protein-coding chr10-787 chr10 79375790 79376000 + 19.3 0.000 Intergenic Intergenic 28426 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr18-344 chr18 61765153 61765363 + 19.3 0.000 Intergenic Intergenic 17082 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr4-751 chr4 184648624 184648834 + 19.3 0.000 intron (NM_004346, intron 1 of 7) intron (NM_004346, intron 1 of 7) 718 NM_004346 836 Hs.141125 NM_004346 ENSG00000164305 CASP3 CPP32|CPP32B|SCA-1 caspase 3 protein-coding chr18-359 chr18 6055823 6056033 + 19.3 0.000 intron (NM_173464, intron 16 of 19) intron (NM_173464, intron 16 of 19) -159974 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr20-317 chr20 36951676 36951886 + 19.3 0.000 promoter-TSS (NM_001363733) promoter-TSS (NM_001363733) 62 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr11-575 chr11 111766165 111766375 + 19.3 0.000 exon (NM_002716, exon 1 of 15) exon (NM_002716, exon 1 of 15) 119 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr9-637 chr9 129703839 129704049 + 19.3 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 14762 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr5-1151 chr5 160165705 160165915 + 19.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -21571 NM_001130958 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr13-667 chr13 99452893 99453103 + 19.3 0.000 Intergenic LTR37A|LTR|ERV1 46308 NR_110731 102725509 Hs.648968 NR_110731 LINC01232 TCONS_00021520 long intergenic non-protein coding RNA 1232 ncRNA chr5-749 chr5 61450155 61450365 + 19.3 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 118002 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr3-229 chr3 13480250 13480460 + 19.3 0.000 promoter-TSS (NM_001330636) promoter-TSS (NM_001330636) 49 NM_001136041 79885 Hs.744132 NM_024827 ENSG00000163517 HDAC11 HD11 histone deacetylase 11 protein-coding chr11-576 chr11 118925854 118926064 + 19.3 0.000 Intergenic CpG 15251 NR_039713 100616376 NR_039713 ENSG00000264211 MIR4492 mir-4492 microRNA 4492 ncRNA chr1-1181 chr1 6625112 6625322 + 19.3 0.000 promoter-TSS (NM_138350) promoter-TSS (NM_138350) 67 NM_001195752 90326 Hs.689006 NM_138350 ENSG00000041988 THAP3 - THAP domain containing 3 protein-coding chr22-611 chr22 17969856 17970066 + 19.3 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) 11000 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chr1-1198 chr1 109090748 109090958 + 19.3 0.000 promoter-TSS (NR_136243) promoter-TSS (NR_136243) 89 NM_001322248 56900 Hs.82933 NM_020141 ENSG00000215717 TMEM167B AD-020|C1orf119 transmembrane protein 167B protein-coding chr2-1400 chr2 70524418 70524628 + 19.3 0.000 intron (NM_003236, intron 1 of 5) intron (NM_003236, intron 1 of 5) 28923 NM_001308159 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr16-784 chr16 27770031 27770241 + 19.3 0.000 intron (NM_015202, intron 21 of 27) intron (NM_015202, intron 21 of 27) -51107 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr11-1488 chr11 125625680 125625890 + 19.3 0.000 promoter-TSS (NM_001330428) promoter-TSS (NM_001330428) 361 NM_001330427 1111 Hs.24529 NM_001274 ENSG00000149554 CHEK1 CHK1 checkpoint kinase 1 protein-coding chr13-591 chr13 113275431 113275641 + 19.3 0.000 Intergenic MER4B|LTR|ERV1 12616 NR_107042 102465874 NR_107042 ENSG00000277942 MIR8075 hsa-mir-8075 microRNA 8075 ncRNA chr11-1175 chr11 64759979 64760189 + 19.3 0.000 promoter-TSS (NM_005609) promoter-TSS (NM_005609) -110 NM_005609 5837 Hs.154084 NM_005609 ENSG00000068976 PYGM - glycogen phosphorylase, muscle associated protein-coding chr8-714 chr8 25479423 25479633 + 19.3 0.000 intron (NM_001317906, intron 6 of 13) intron (NM_001317906, intron 6 of 13) 20295 NM_152562 157313 Hs.33366 NM_152562 ENSG00000184661 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding chr17-1101 chr17 76711114 76711324 + 19.3 0.000 promoter-TSS (NM_001008529) promoter-TSS (NM_001008529) -254 NM_001008529 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr15-345 chr15 78390942 78391152 + 19.3 0.000 Intergenic Intergenic -46384 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr6-1064 chr6 17098522 17098732 + 19.3 0.000 Intergenic Intergenic -3631 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr11-1051 chr11 46446506 46446716 + 19.3 0.000 intron (NM_001267782, intron 13 of 19) MER20|DNA|hAT-Charlie -5196 NR_036118 100422825 NR_036118 ENSG00000283497 MIR3160-2 mir-3160-2 microRNA 3160-2 ncRNA chrX-134 chrX 24647271 24647481 + 19.3 0.000 promoter-TSS (NM_001163265) promoter-TSS (NM_001163265) -29 NM_004845 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr8-467 chr8 26045314 26045524 + 19.3 0.000 promoter-TSS (NM_022659) promoter-TSS (NM_022659) -6 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr4-794 chr4 10296747 10296957 + 19.3 0.000 Intergenic MER9B|LTR|ERVK 160574 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr1-1255 chr1 204104613 204104823 + 19.3 0.000 intron (NM_005686, intron 1 of 13) intron (NM_005686, intron 1 of 13) 31603 NM_005686 9580 Hs.201671 NM_005686 ENSG00000143842 SOX13 ICA12|Sox-13 SRY-box transcription factor 13 protein-coding chr12-1408 chr12 8034804 8035014 + 19.3 0.000 intron (NM_018416, intron 1 of 10) intron (NM_018416, intron 1 of 10) 2193 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr15-360 chr15 75647562 75647772 + 19.3 0.000 Intergenic CpG -1340 NM_153271 257364 Hs.8705 NM_153271 ENSG00000173548 SNX33 SH3PX3|SH3PXD3C|SNX30 sorting nexin 33 protein-coding chr6-483 chr6 129684022 129684232 + 19.3 0.000 intron (NM_033515, intron 1 of 14) intron (NM_033515, intron 1 of 14) 26050 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr19-945 chr19 49074974 49075184 + 19.3 0.000 Intergenic LTR13|LTR|ERVK -2138 NM_031886 3743 Hs.306973 NM_031886 ENSG00000104848 KCNA7 HAK6|KV1.7 potassium voltage-gated channel subfamily A member 7 protein-coding chr17-878 chr17 17663414 17663624 + 19.3 0.000 Intergenic Intergenic 14169 NR_131243 105371564 Hs.369680 NR_131243 ENSG00000223979 SMCR2 TCONS_00025215 Smith-Magenis syndrome chromosome region, candidate 2 ncRNA chr11-1861 chr11 114292354 114292564 + 19.3 0.000 Intergenic Intergenic -3354 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr16-793 chr16 70573578 70573788 + 19.3 0.000 3' UTR (NM_012426, exon 26 of 26) 3' UTR (NM_012426, exon 26 of 26) -6212 NM_152456 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr7-1795 chr7 84490767 84490977 + 19.3 0.000 Intergenic Intergenic -41604 NR_110079 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr2-1674 chr2 100767367 100767577 + 19.3 0.000 Intergenic Intergenic -52667 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr12-539 chr12 50242723 50242933 + 19.3 0.000 intron (NM_016357, intron 2 of 10) (CTGGGAT)n|Simple_repeat|Simple_repeat -8616 NR_031625 100302220 NR_031625 ENSG00000221604 MIR1293 MIRN1293|hsa-mir-1293|mir-1293 microRNA 1293 ncRNA chr5-1199 chr5 75551612 75551822 + 19.3 0.000 intron (NM_016218, intron 2 of 14) L1M4|LINE|L1 -39736 NM_001130105 10087 Hs.270437 NM_005713 ENSG00000113163 CERT1 CERT|CERTL|COL4A3BP|GPBP|MRD34|STARD11 ceramide transporter 1 protein-coding chr10-1267 chr10 500999 501209 + 19.3 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -127460 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr8-1259 chr8 140310483 140310693 + 19.3 0.000 intron (NM_001160372, intron 10 of 22) intron (NM_001160372, intron 10 of 22) 147156 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr2-658 chr2 71331641 71331851 + 19.3 0.000 promoter-TSS (NM_014497) promoter-TSS (NM_014497) -9 NM_001252613 27332 Hs.434401 NM_014497 ENSG00000075292 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding chr1-2015 chr1 93178105 93178315 + 19.3 0.000 intron (NM_001167830, intron 1 of 4) intron (NM_001167830, intron 1 of 4) 2203 NM_016040 50999 Hs.482873 NM_016040 ENSG00000117500 TMED5 CGI-100|p24g2|p28 transmembrane p24 trafficking protein 5 protein-coding chr10-654 chr10 94402295 94402505 + 19.3 0.000 promoter-TSS (NM_015188) promoter-TSS (NM_015188) -141 NM_015188 23232 Hs.500598 NM_015188 ENSG00000108239 TBC1D12 - TBC1 domain family member 12 protein-coding chr11-836 chr11 76836454 76836664 + 19.3 0.000 Intergenic Intergenic -24359 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chrX-242 chrX 37958895 37959105 + 19.3 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -31779 NM_012274 25763 Hs.122959 NM_012274 ENSG00000187516 HYPM CXorf27|HIP17 huntingtin interacting protein M protein-coding chr10-1162 chr10 5614468 5614678 + 19.3 0.000 Intergenic Intergenic -18455 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr14-385 chr14 50830959 50831169 + 19.3 0.000 promoter-TSS (NM_020921) promoter-TSS (NM_020921) 57 NM_020921 51199 Hs.310429 NM_016350 ENSG00000100503 NIN SCKL7 ninein protein-coding chr11-1267 chr11 13984755 13984965 + 19.3 0.000 intron (NM_006108, intron 2 of 15) intron (NM_006108, intron 2 of 15) 22137 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr2-1960 chr2 237097992 237098202 + 19.3 0.000 3' UTR (NM_006710, exon 8 of 8) 3' UTR (NM_006710, exon 8 of 8) 12208 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr3-617 chr3 149129391 149129601 + 19.3 0.000 promoter-TSS (NM_032383) promoter-TSS (NM_032383) -142 NM_032383 84343 Hs.558314 NM_032383 ENSG00000163755 HPS3 BLOC2S1|SUTAL HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 protein-coding chr5-803 chr5 74576965 74577175 + 19.3 0.000 Intergenic Intergenic -40094 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA chr11-1643 chr11 95692474 95692684 + 19.3 0.000 Intergenic L2|LINE|L2 97203 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr14-655 chr14 45135796 45136006 + 19.3 0.000 promoter-TSS (NM_020937) promoter-TSS (NM_020937) -29 NM_001308133 57697 Hs.509229 NM_020937 ENSG00000187790 FANCM FAAP250|KIAA1596|POF15|SPGF28 FA complementation group M protein-coding chr9-1428 chr9 131658530 131658740 + 19.3 0.000 intron (NM_001304275, intron 1 of 23) intron (NM_001304275, intron 1 of 23) 51207 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chrX-51 chrX 16870241 16870451 + 19.3 0.000 promoter-TSS (NM_001198719) promoter-TSS (NM_001198719) 16 NM_002893 5931 Hs.495755 NM_002893 ENSG00000102054 RBBP7 RbAp46 RB binding protein 7, chromatin remodeling factor protein-coding chr4-1049 chr4 57095087 57095297 + 19.3 0.000 intron (NM_001553, intron 1 of 4) Tigger17a|DNA|TcMar-Tigger -14570 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr2-927 chr2 53632947 53633157 + 19.3 0.000 Intergenic Intergenic -134731 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr13-607 chr13 102191843 102192053 + 19.3 0.000 intron (NM_175929, intron 1 of 4) MLT1A-int|LTR|ERVL-MaLR 118738 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr14-741 chr14 51007092 51007302 + 19.3 0.000 intron (NM_015163, intron 5 of 9) intron (NM_015163, intron 5 of 9) -62714 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr2-2157 chr2 209426563 209426773 + 19.3 0.000 intron (NM_001039538, intron 1 of 14) intron (NM_001039538, intron 1 of 14) 2621 NM_001039538 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr12-1145 chr12 120119545 120119755 + 19.3 0.000 Intergenic Intergenic -2897 NM_001167606 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr15-390 chr15 41283854 41284064 + 19.3 0.000 promoter-TSS (NR_026757) promoter-TSS (NR_026757) -31 NR_152822 729082 Hs.380164 NR_026757 ENSG00000247556 OIP5-AS1 cyrano|linc-OIP5 OIP5 antisense RNA 1 ncRNA chr14-739 chr14 48665448 48665658 + 19.3 0.000 Intergenic L2c|LINE|L2 -870539 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr16-608 chr16 75342396 75342606 + 19.3 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) -74494 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr7-1221 chr7 102835021 102835231 + 19.3 0.000 intron (NM_001287150, intron 16 of 18) intron (NM_001287150, intron 16 of 18) -77874 NM_001031692 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr6-898 chr6 127266527 127266737 + 19.3 0.000 promoter-TSS (NM_001242849) promoter-TSS (NM_001242849) -50 NM_001242851 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr13-365 chr13 47114037 47114247 + 19.3 0.000 Intergenic L2|LINE|L2 -217066 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr2-1130 chr2 39494969 39495179 + 19.3 0.000 intron (NR_037875, intron 3 of 5) intron (NR_037875, intron 3 of 5) 57658 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr1-1090 chr1 56579479 56579689 + 19.3 0.000 promoter-TSS (NM_003713) promoter-TSS (NM_003713) -21 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr1-1254 chr1 186680136 186680346 + 19.3 0.000 promoter-TSS (NR_125801) promoter-TSS (NR_125801) 182 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding chr10-1447 chr10 69061430 69061640 + 19.3 0.000 Intergenic Intergenic -26068 NM_001321053 5552 Hs.1908 NM_002727 ENSG00000122862 SRGN PPG|PRG|PRG1 serglycin protein-coding chr18-602 chr18 59547860 59548070 + 19.3 0.000 intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) 149458 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr12-707 chr12 92298166 92298376 + 19.3 0.000 Intergenic Intergenic -123260 NR_027932 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 ncRNA chr7-1099 chr7 24979259 24979469 + 19.3 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) 814 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr9-407 chr9 32550833 32551043 + 19.3 0.000 promoter-TSS (NM_001349119) promoter-TSS (NM_001349119) -206 NM_001349118 100129250 Hs.664395 NM_001349118 ENSG00000235453 SMIM27 C9orf133|TOPORS-AS1 small integral membrane protein 27 protein-coding chr22-442 chr22 30790641 30790851 + 19.3 0.000 intron (NM_001282740, intron 1 of 12) intron (NM_001282740, intron 1 of 12) 26493 NM_001282740 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chrX-167 chrX 119655295 119655505 + 19.3 0.000 intron (NM_145799, intron 3 of 10) L2c|LINE|L2 -8552 NR_030413 768218 NR_030413 ENSG00000211578 MIR766 MIRN766|hsa-mir-766|mir-766 microRNA 766 ncRNA chr5-1213 chr5 126435102 126435312 + 19.3 0.000 intron (NR_146196, intron 1 of 14) L2c|LINE|L2 11798 NR_146195 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr8-565 chr8 86176758 86176968 + 19.3 0.000 Intergenic Intergenic 53518 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr10-755 chr10 73859715 73859925 + 19.3 0.000 intron (NR_160046, intron 3 of 19) intron (NR_160046, intron 3 of 19) 14735 NM_001367518 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr1-2650 chr1 164608887 164609097 + 19.3 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 49270 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr2-745 chr2 65300843 65301053 + 19.3 0.000 Intergenic Intergenic 65830 NM_001128210 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr14-1091 chr14 51738416 51738626 + 19.3 0.000 Intergenic Intergenic 21238 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr11-973 chr11 64877024 64877234 + 19.3 0.000 intron (NM_006795, intron 1 of 4) intron (NM_006795, intron 1 of 4) 1480 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr14-236 chr14 34462169 34462379 + 19.3 0.000 promoter-TSS (NM_138288) promoter-TSS (NM_138288) -34 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr16-973 chr16 65002251 65002461 + 19.3 0.000 intron (NM_001330576, intron 2 of 11) intron (NM_001330576, intron 2 of 11) 119707 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr11-685 chr11 10293468 10293678 + 19.3 0.000 intron (NM_030962, intron 1 of 39) intron (NM_030962, intron 1 of 39) 634 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr1-2014 chr1 87226369 87226579 + 19.3 0.000 intron (NM_001290053, intron 2 of 3) intron (NM_001290053, intron 2 of 3) 13805 NM_001290053 101927844 Hs.694591 NM_001290053 LINC02801 - long intergenic non-protein coding RNA 2801 protein-coding chr2-919 chr2 219552730 219552940 + 19.3 0.000 intron (NM_015311, intron 17 of 20) CpG-17039 -3688 NR_036082 100423039 NR_036082 ENSG00000265252 MIR3132 - microRNA 3132 ncRNA chr1-2118 chr1 200352298 200352508 + 19.3 0.000 intron (NR_040064, intron 4 of 4) intron (NR_040064, intron 4 of 4) 21389 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr17-1900 chr17 64623358 64623568 + 19.3 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 38844 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr4-1333 chr4 153750205 153750415 + 19.3 0.000 intron (NM_173662, intron 2 of 8) intron (NM_173662, intron 2 of 8) 9714 NM_173662 285533 Hs.388364 NM_173662 ENSG00000145428 RNF175 - ring finger protein 175 protein-coding chr1-1350 chr1 21440775 21440985 + 19.3 0.000 intron (NM_001256416, intron 1 of 14) intron (NM_001256416, intron 1 of 14) 743 NM_001256416 84224 Hs.325422 NM_032264 ENSG00000142794 NBPF3 AE2 NBPF member 3 protein-coding chr2-656 chr2 48440653 48440863 + 19.3 0.000 promoter-TSS (NM_152994) promoter-TSS (NM_152994) -8 NM_001135629 129285 Hs.654619 NM_152994 ENSG00000162869 PPP1R21 CCDC128|KLRAQ1 protein phosphatase 1 regulatory subunit 21 protein-coding chr2-1721 chr2 223626789 223626999 + 19.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -24533 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr17-1116 chr17 16028175 16028385 + 19.3 0.000 TTS (NM_006311) TTS (NM_006311) 28456 NM_001271420 54902 Hs.462316 NM_017775 ENSG00000011295 TTC19 2010204O13Rik|MC3DN2 tetratricopeptide repeat domain 19 protein-coding chr8-442 chr8 144767934 144768144 + 19.3 0.000 Intergenic Intergenic -12508 NM_138367 90987 Hs.534516 NM_138367 ENSG00000198169 ZNF251 - zinc finger protein 251 protein-coding chr16-1012 chr16 75294568 75294778 + 19.3 0.000 intron (NM_006324, intron 6 of 6) intron (NM_006324, intron 6 of 6) -26666 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr10-1089 chr10 43390770 43390980 + 19.3 0.000 intron (NM_001098208, intron 2 of 2) MER20|DNA|hAT-Charlie 5956 NM_001098208 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr11-1098 chr11 28679836 28680046 + 19.3 0.000 Intergenic MIR|SINE|MIR -202393 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr3-1044 chr3 187101249 187101459 + 19.3 0.000 Intergenic Intergenic 38142 NM_052969 116832 Hs.647900 NM_052969 ENSG00000163923 RPL39L L39-2|RPL39L1 ribosomal protein L39 like protein-coding chr9-1385 chr9 81820234 81820444 + 19.3 0.000 Intergenic Intergenic -93098 NR_026851 347127 Hs.215235 NM_198509 ENSG00000240632 SPATA31D5P FAM75D5|FAM75D5P SPATA31 subfamily D member 5, pseudogene pseudo chr11-1936 chr11 77658318 77658528 + 19.3 0.000 Intergenic Intergenic -20617 NM_001311199 1207 Hs.430733 NM_001293 ENSG00000074201 CLNS1A CLCI|CLNS1B|ICln chloride nucleotide-sensitive channel 1A protein-coding chr4-826 chr4 150212046 150212256 + 19.3 0.000 intron (NR_036614, intron 5 of 16) intron (NR_036614, intron 5 of 16) 133706 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr20-78 chr20 63895010 63895220 + 19.3 0.000 promoter-TSS (NM_025219) promoter-TSS (NM_025219) -11 NM_025219 80331 Hs.164419 NM_025219 ENSG00000101152 DNAJC5 CLN4|CLN4B|CSP|DNAJC5A|NCL|mir-941-2|mir-941-3|mir-941-4|mir-941-5 DnaJ heat shock protein family (Hsp40) member C5 protein-coding chr1-1370 chr1 43835228 43835438 + 19.2 0.000 intron (NM_001363573, intron 5 of 10) intron (NM_001363573, intron 5 of 10) -3289 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA chr19-1232 chr19 31127635 31127845 + 19.2 0.000 Intergenic Intergenic -39770 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr11-1487 chr11 125083119 125083329 + 19.2 0.000 intron (NM_001145290, intron 10 of 17) intron (NM_001145290, intron 10 of 17) 19919 NM_198277 219855 Hs.352661 NM_198277 ENSG00000134955 SLC37A2 pp11662 solute carrier family 37 member 2 protein-coding chr4-793 chr4 8315878 8316088 + 19.2 0.000 Intergenic Intergenic -4193 NR_149126 105374374 Hs.145224 NR_149125 ENSG00000249145 LINC02517 - long intergenic non-protein coding RNA 2517 ncRNA chr6-171 chr6 41734725 41734935 + 19.2 0.000 promoter-TSS (NM_001271945) promoter-TSS (NM_001271945) 230 NM_007162 7942 Hs.485360 NM_007162 ENSG00000112561 TFEB ALPHATFEB|BHLHE35|TCFEB transcription factor EB protein-coding chr19-1559 chr19 982555 982765 + 19.2 0.000 Intergenic Intergenic -1668 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr12-1218 chr12 1537313 1537523 + 19.2 0.000 Intergenic L2a|LINE|L2 -5226 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr16-575 chr16 88383010 88383220 + 19.2 0.000 Intergenic CpG -44356 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr12-680 chr12 53496248 53496458 + 19.2 0.000 intron (NM_006301, intron 1 of 14) intron (NM_006301, intron 1 of 14) 3105 NM_006301 7786 Hs.713539 NM_006301 ENSG00000139625 MAP3K12 DLK|MEKK12|MUK|ZPK|ZPKP1 mitogen-activated protein kinase kinase kinase 12 protein-coding chr8-315 chr8 143972277 143972487 + 19.2 0.000 intron (NM_000445, intron 2 of 32) intron (NM_000445, intron 2 of 32) 1147 NM_201378 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr4-558 chr4 76067789 76067999 + 19.2 0.000 intron (NM_001130017, intron 1 of 9) intron (NM_001130017, intron 1 of 9) -6801 NM_001130016 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr4-646 chr4 123832417 123832627 + 19.2 0.000 intron (NR_027105, intron 4 of 5) intron (NR_027105, intron 4 of 5) 58258 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr5-976 chr5 6722105 6722315 + 19.2 0.000 intron (NM_001171805, intron 1 of 12) MIRc|SINE|MIR 8778 NM_001171805 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr2-1028 chr2 29766295 29766505 + 19.2 0.000 intron (NM_004304, intron 1 of 28) intron (NM_004304, intron 1 of 28) 155186 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr3-1005 chr3 57646812 57647022 + 19.2 0.000 intron (NM_152678, intron 9 of 19) intron (NM_152678, intron 9 of 19) 46160 NM_152678 201627 Hs.91085 NM_152678 ENSG00000174839 DENND6A AFI1A|FAM116A DENN domain containing 6A protein-coding chr1-2872 chr1 203643684 203643894 + 19.2 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 15852 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr19-557 chr19 47226186 47226396 + 19.2 0.000 promoter-TSS (NR_036158) promoter-TSS (NR_036158) -651 NR_036158 100422899 NR_036158 ENSG00000265134 MIR3190 mir-3190 microRNA 3190 ncRNA chr16-1107 chr16 88240154 88240364 + 19.2 0.000 Intergenic Intergenic 45978 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr8-808 chr8 130068564 130068774 + 19.2 0.000 intron (NM_001362925, intron 27 of 29) MER21-int|LTR|ERVL 16099 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr11-1114 chr11 206694 206904 + 19.2 0.000 promoter-TSS (NM_001286134) promoter-TSS (NM_001286134) 623 NM_016526 51272 Hs.414418 NM_016465 ENSG00000177951 BET1L BET1L1|GOLIM3|GS15|HSPC197 Bet1 golgi vesicular membrane trafficking protein like protein-coding chr18-261 chr18 68406839 68407049 + 19.2 0.000 Intergenic L2c|LINE|L2 308164 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr1-3154 chr1 70487424 70487634 + 19.2 0.000 Intergenic Intergenic 76261 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr1-1416 chr1 16643882 16644092 + 19.2 0.000 Intergenic MER3|DNA|hAT-Charlie -1587 NR_027504 11209 Hs.349110 NR_027504 MST1P2 MSPL-1|MSPL-2|MSPL-3|MSPL1|MSPL2|MSPL3|MSTP1|MSTP2|MSTP3 macrophage stimulating 1 pseudogene 2 pseudo chr4-763 chr4 21113541 21113751 + 19.2 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) -129637 NM_001363504 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr8-496 chr8 60455544 60455754 + 19.2 0.000 Intergenic L2b|LINE|L2 -41831 NR_103854 100505532 Hs.720321 NR_103854 LINC01301 - long intergenic non-protein coding RNA 1301 ncRNA chr5-968 chr5 158803208 158803418 + 19.2 0.000 intron (NM_001324107, intron 8 of 15) intron (NM_001324107, intron 8 of 15) 294643 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr21-379 chr21 27024433 27024643 + 19.2 0.000 Intergenic Intergenic -57450 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr10-1054 chr10 96565861 96566071 + 19.2 0.000 intron (NM_020123, intron 2 of 14) intron (NM_020123, intron 2 of 14) 21046 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr13-176 chr13 36706947 36707157 + 19.2 0.000 Intergenic Intergenic 33032 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr20-215 chr20 52191584 52191794 + 19.2 0.000 promoter-TSS (NM_022088) promoter-TSS (NM_022088) 90 NM_018197 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr3-1679 chr3 9353242 9353452 + 19.2 0.000 Intergenic Intergenic -9707 NM_001114092 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding chr14-389 chr14 96054008 96054218 + 19.2 0.000 intron (NM_001282463, intron 2 of 2) intron (NM_001282463, intron 2 of 2) 14751 NM_001282463 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr16-518 chr16 70433092 70433302 + 19.2 0.000 intron (NM_006927, intron 1 of 6) intron (NM_006927, intron 1 of 6) 5903 NM_006927 6483 Hs.368611 NM_006927 ENSG00000157350 ST3GAL2 Gal-NAc6S|SIAT4B|ST3GALII|ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding chr2-777 chr2 69741399 69741609 + 19.2 0.000 promoter-TSS (NM_001320702) promoter-TSS (NM_001320702) -630 NM_001153 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr16-1233 chr16 89863879 89864089 + 19.2 0.000 intron (NM_032451, intron 12 of 14) MER3|DNA|hAT-Charlie -9608 NM_014972 22980 Hs.415342 NM_014972 ENSG00000141002 TCF25 FKSG26|Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 protein-coding chr5-739 chr5 160467928 160468138 + 19.2 0.000 promoter-TSS (NR_132748) promoter-TSS (NR_132748) -218 NR_132748 107075116 Hs.735831 NR_132748 ENSG00000253522 MIR3142HG - MIR3142 host gene ncRNA chr2-2061 chr2 189286387 189286597 + 19.2 0.000 Intergenic Intergenic -106731 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr7-516 chr7 156893322 156893532 + 19.2 0.000 promoter-TSS (NM_001350956) promoter-TSS (NM_001350956) -219 NR_146959 64327 Hs.209989 NM_022458 ENSG00000105983 LMBR1 ACHP|C7orf2|DIF14|LSS|PPD2|THYP|TPT|ZRS limb development membrane protein 1 protein-coding chr13-160 chr13 39037857 39038067 + 19.2 0.000 promoter-TSS (NM_001017370) promoter-TSS (NM_001017370) 114 NM_170719 80209 Hs.318526 NM_025138 ENSG00000120685 PROSER1 C13orf23 proline and serine rich 1 protein-coding chr5-520 chr5 140175663 140175873 + 19.2 0.000 intron (NM_032412, intron 1 of 2) CpG 580 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr8-1701 chr8 106148291 106148501 + 19.2 0.000 Intergenic Intergenic -87893 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr1-1437 chr1 147505001 147505211 + 19.2 0.000 intron (NR_038423, intron 3 of 3) intron (NR_038423, intron 3 of 3) 12769 NR_038423 100289211 Hs.323484 NR_038423 ENSG00000278811 LINC00624 - long intergenic non-protein coding RNA 624 ncRNA chr2-858 chr2 97589750 97589960 + 19.2 0.000 promoter-TSS (NM_001353337) promoter-TSS (NM_001353337) 22 NM_001353337 57730 Hs.532921 NM_020970 ENSG00000196912 ANKRD36B KIAA1641 ankyrin repeat domain 36B protein-coding chr6-568 chr6 18551336 18551546 + 19.2 0.000 intron (NR_149116, intron 3 of 7) intron (NR_149116, intron 3 of 7) -20343 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr1-589 chr1 83999209 83999419 + 19.2 0.000 promoter-TSS (NM_024686) promoter-TSS (NM_024686) -182 NM_001350215 79739 Hs.445826 NM_024686 ENSG00000137941 TTLL7 - tubulin tyrosine ligase like 7 protein-coding chr1-1938 chr1 23868223 23868433 + 19.2 0.000 promoter-TSS (NM_000147) promoter-TSS (NM_000147) 41 NM_000147 2517 Hs.370858 NM_000147 ENSG00000179163 FUCA1 FUCA alpha-L-fucosidase 1 protein-coding chr3-1460 chr3 51682165 51682375 + 19.2 0.000 intron (NM_001243727, intron 2 of 3) intron (NM_001243727, intron 2 of 3) 10643 NR_103463 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr3-1026 chr3 136778885 136779095 + 19.2 0.000 Intergenic L2c|LINE|L2 -26612 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr3-1051 chr3 196978771 196978981 + 19.2 0.000 Intergenic Intergenic -10043 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding chr8-669 chr8 54269036 54269246 + 19.2 0.000 Intergenic Intergenic -61545 NR_004385 26766 NR_004385 ENSG00000199212 RNU105C E1-5|E1-6 RNA, U105C small nucleolar snoRNA chr1-1809 chr1 198121169 198121379 + 19.2 0.000 Intergenic Intergenic -35724 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr1-2851 chr1 150604745 150604955 + 19.2 0.000 Intergenic Intergenic 24283 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr19-808 chr19 17419810 17420020 + 19.2 0.000 promoter-TSS (NM_138401) promoter-TSS (NM_138401) -132 NM_138401 93343 Hs.515243 NM_138401 ENSG00000141971 MVB12A CFBP|FAM125A multivesicular body subunit 12A protein-coding chr3-1322 chr3 47017213 47017423 + 19.2 0.000 intron (NR_146158, intron 21 of 21) intron (NR_146158, intron 21 of 21) 5776 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr3-1472 chr3 65834206 65834416 + 19.2 0.000 intron (NM_001365904, intron 1 of 24) L2a|LINE|L2 -59505 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr1-3224 chr1 180043159 180043369 + 19.2 0.000 intron (NM_014810, intron 20 of 37) L2b|LINE|L2 88454 NM_014810 9857 Hs.413045 NM_014810 ENSG00000135837 CEP350 CAP350|GM133 centrosomal protein 350 protein-coding chr9-572 chr9 35489846 35490056 + 19.2 0.000 promoter-TSS (NM_001330740) promoter-TSS (NM_001330740) -160 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr14-591 chr14 70856986 70857196 + 19.2 0.000 Intergenic L2c|LINE|L2 -47578 NM_033141 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding chr17-773 chr17 44071037 44071247 + 19.2 0.000 exon (NM_001319945, exon 1 of 5) exon (NM_001319945, exon 1 of 5) 231 NR_028582 92579 Hs.294005 NM_138387 ENSG00000141349 G6PC3 SCN4|UGRP glucose-6-phosphatase catalytic subunit 3 protein-coding chr13-431 chr13 52201510 52201720 + 19.2 0.000 Intergenic Intergenic -7148 NR_051963 100887750 Hs.553878 NR_002816 ENSG00000243406 MRPS31P5 MRPS31P3 mitochondrial ribosomal protein S31 pseudogene 5 pseudo chr10-934 chr10 4942946 4943156 + 19.2 0.000 Intergenic Intergenic -20364 NM_001353 1645 Hs.460260 NM_001353 ENSG00000187134 AKR1C1 2-ALPHA-HSD|20-ALPHA-HSD|C9|DD1|DD1/DD2|DDH|DDH1|H-37|HAKRC|HBAB|MBAB aldo-keto reductase family 1 member C1 protein-coding chr19-905 chr19 53431652 53431862 + 19.2 0.000 promoter-TSS (NM_001008401) promoter-TSS (NM_001008401) -217 NR_110551 388561 Hs.433293 NM_001008401 ENSG00000160336 ZNF761 ZNF468 zinc finger protein 761 protein-coding chr6-882 chr6 83183542 83183752 + 19.2 0.000 intron (NR_159812, intron 4 of 14) L1MEd|LINE|L1 9618 NM_001199918 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr5-985 chr5 32174369 32174579 + 19.2 0.000 promoter-TSS (NM_022130) promoter-TSS (NM_022130) -155 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr15-519 chr15 40081846 40082056 + 19.2 0.000 Intergenic Intergenic 24135 NM_001003942 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr19-1036 chr19 12064597 12064807 + 19.2 0.000 promoter-TSS (NM_001136501) promoter-TSS (NM_001136501) 3 NR_134326 284391 Hs.646391 NM_001136501 ENSG00000223547 ZNF844 - zinc finger protein 844 protein-coding chr2-1668 chr2 85717800 85718010 + 19.2 0.000 Intergenic Intergenic 23547 NM_006433 10578 Hs.105806 NM_006433 ENSG00000115523 GNLY D2S69E|LAG-2|LAG2|NKG5|TLA519 granulysin protein-coding chr22-336 chr22 50270877 50271087 + 19.2 0.000 promoter-TSS (NR_110887) promoter-TSS (NR_110887) -602 NM_002751 5600 Hs.57732 NM_002751 ENSG00000185386 MAPK11 P38B|P38BETA2|PRKM11|SAPK2|SAPK2B|p38-2|p38Beta mitogen-activated protein kinase 11 protein-coding chr5-1039 chr5 170571532 170571742 + 19.2 0.000 intron (NM_001278339, intron 1 of 7) L2c|LINE|L2 67617 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr12-1019 chr12 25961724 25961934 + 19.2 0.000 intron (NM_001164748, intron 1 of 4) L2a|LINE|L2 -2387 NR_038228 100506451 Hs.560092 NR_038227 RASSF8-AS1 - RASSF8 antisense RNA 1 ncRNA chr11-1479 chr11 119207046 119207256 + 19.2 0.000 intron (NM_005188, intron 1 of 15) intron (NM_005188, intron 1 of 15) 875 NM_005188 867 Hs.504096 NM_005188 ENSG00000110395 CBL C-CBL|CBL2|FRA11B|NSLL|RNF55 Cbl proto-oncogene protein-coding chr13-167 chr13 113449169 113449379 + 19.2 0.000 promoter-TSS (NM_199162) promoter-TSS (NM_199162) -116 NM_199162 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding chr22-394 chr22 47328931 47329141 + 19.2 0.000 Intergenic Intergenic -16535 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr3-2091 chr3 21237742 21237952 + 19.2 0.000 Intergenic Intergenic -167879 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr6-1486 chr6 51711919 51712129 + 19.2 0.000 intron (NM_138694, intron 60 of 66) intron (NM_138694, intron 60 of 66) 90154 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr15-636 chr15 83046850 83047060 + 19.2 0.000 intron (NM_001011885, intron 3 of 6) intron (NM_001011885, intron 3 of 6) 20297 NM_001011885 53339 Hs.459149 NM_025238 ENSG00000064726 BTBD1 C15orf1|NS5ATP8 BTB domain containing 1 protein-coding chr1-1816 chr1 214102930 214103140 + 19.2 0.000 Intergenic Intergenic 114502 NM_002763 5629 Hs.741808 NM_002763 ENSG00000117707 PROX1 - prospero homeobox 1 protein-coding chr7-323 chr7 87628154 87628364 + 19.2 0.000 promoter-TSS (NM_001134405) promoter-TSS (NM_001134405) -139 NM_138290 154661 Hs.411488 NM_138290 ENSG00000105784 RUNDC3B RPIB9|RPIP9 RUN domain containing 3B protein-coding chr18-120 chr18 5456733 5456943 + 19.2 0.000 intron (NM_001281535, intron 5 of 21) intron (NM_001281535, intron 5 of 21) 83718 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr1-2835 chr1 67355909 67356119 + 19.2 0.000 intron (NM_001319233, intron 10 of 15) L2a|LINE|L2 48650 NM_001258215 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr5-1597 chr5 19853988 19854198 + 19.2 0.000 intron (NM_001349562, intron 2 of 13) intron (NM_001349562, intron 2 of 13) 32179 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr3-888 chr3 38165114 38165324 + 19.2 0.000 promoter-TSS (NM_005109) promoter-TSS (NM_005109) -318 NM_005109 9943 Hs.475970 NM_005109 ENSG00000172939 OXSR1 OSR1 oxidative stress responsive kinase 1 protein-coding chr7-575 chr7 55052093 55052303 + 19.2 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) 33166 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr13-756 chr13 75762693 75762903 + 19.2 0.000 intron (NM_005358, intron 5 of 29) intron (NM_005358, intron 5 of 29) 2137 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chrX-298 chrX 123756397 123756607 + 19.2 0.000 Intergenic HERV16-int|LTR|ERVL -23450 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr12-654 chr12 54592425 54592635 + 19.2 0.000 Intergenic Intergenic -3871 NM_006741 5502 Hs.505662 NM_006741 ENSG00000135447 PPP1R1A I1|IPP1 protein phosphatase 1 regulatory inhibitor subunit 1A protein-coding chr10-897 chr10 113454644 113454854 + 19.2 0.000 Intergenic Intergenic -96082 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr10-532 chr10 77290814 77291024 + 19.2 0.000 intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 59842 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr8-805 chr8 124953831 124954041 + 19.2 0.000 Intergenic MamRTE1|LINE|RTE-BovB 11928 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA chr14-729 chr14 91980245 91980455 + 19.2 0.000 intron (NM_004239, intron 16 of 20) intron (NM_004239, intron 16 of 20) -32648 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr20-428 chr20 22805274 22805484 + 19.2 0.000 Intergenic Intergenic -120035 NR_146528 105372566 Hs.555065 NR_146527 LINC01747 - long intergenic non-protein coding RNA 1747 ncRNA chr6-1029 chr6 135880037 135880247 + 19.2 0.000 intron (NM_018945, intron 1 of 12) intron (NM_018945, intron 1 of 12) 28441 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr1-2257 chr1 201850098 201850308 + 19.2 0.000 intron (NM_018085, intron 4 of 23) intron (NM_018085, intron 4 of 23) -13170 NR_106797 102466724 NR_106797 ENSG00000277681 MIR6739 hsa-mir-6739 microRNA 6739 ncRNA chr1-2244 chr1 171654572 171654782 + 19.2 0.000 Intergenic Intergenic -1989 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr16-820 chr16 71474925 71475135 + 19.2 0.000 3' UTR (NM_006961, exon 6 of 6) 3' UTR (NM_006961, exon 6 of 6) -12783 NM_001304494 7571 Hs.656643 NM_145911 ENSG00000167377 ZNF23 KOX16|ZNF359|ZNF612|Zfp612 zinc finger protein 23 protein-coding chr11-630 chr11 1772618 1772828 + 19.2 0.000 Intergenic Intergenic -8796 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr12-1271 chr12 71045893 71046103 + 19.2 0.000 Intergenic Intergenic 111811 NM_001369760 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr16-814 chr16 65572277 65572487 + 19.2 0.000 intron (NR_027755, intron 1 of 8) intron (NR_027755, intron 1 of 8) 3918 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr11-1458 chr11 77542437 77542647 + 19.2 0.000 Intergenic Intergenic -28547 NR_130930 646029 Hs.609654 NM_001039908 LOC646029 - uncharacterized LOC646029 ncRNA chr8-583 chr8 128540487 128540697 + 19.2 0.000 intron (NR_121672, intron 2 of 7) intron (NR_121672, intron 2 of 7) 24087 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr1-2569 chr1 27564022 27564232 + 19.2 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 39367 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr22-567 chr22 42031363 42031573 + 19.2 0.000 Intergenic Intergenic 32680 NM_152613 164684 Hs.655541 NM_152613 ENSG00000183066 WBP2NL GRAMD7|PAWP WBP2 N-terminal like protein-coding chr9-1387 chr9 88499096 88499306 + 19.2 0.000 Intergenic Intergenic -35900 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr12-2175 chr12 913137 913347 + 19.2 0.000 non-coding (NR_123713, exon 14 of 14) non-coding (NR_123713, exon 14 of 14) 19834 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr17-818 chr17 43021155 43021365 + 19.2 0.000 intron (NM_006373, intron 1 of 5) intron (NM_006373, intron 1 of 5) 1125 NM_006373 10493 Hs.514199 NM_006373 ENSG00000108828 VAT1 VATI vesicle amine transport 1 protein-coding chr11-1537 chr11 8006404 8006614 + 19.2 0.000 Intergenic Intergenic 10000 NR_125366 103581031 Hs.249366 NR_125366 ENSG00000255420 CASC23 LINC01464 cancer susceptibility 23 ncRNA chr11-1069 chr11 68643725 68643935 + 19.2 0.000 Intergenic Intergenic -40714 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr8-593 chr8 27356440 27356650 + 19.2 0.000 intron (NM_173175, intron 1 of 29) intron (NM_173175, intron 1 of 29) 30981 NM_173175 2185 Hs.491322 NM_004103 ENSG00000120899 PTK2B CADTK|CAKB|FADK2|FAK2|PKB|PTK|PYK2|RAFTK protein tyrosine kinase 2 beta protein-coding chr4-1439 chr4 107854204 107854414 + 19.2 0.000 intron (NM_001136258, intron 1 of 6) intron (NM_001136258, intron 1 of 6) 29744 NM_001136258 166929 Hs.595423 NM_152621 ENSG00000164023 SGMS2 SMS2 sphingomyelin synthase 2 protein-coding chr8-686 chr8 123235769 123235979 + 19.2 0.000 intron (NM_001204180, intron 4 of 5) intron (NM_001204180, intron 4 of 5) 5503 NM_032847 84933 Hs.707401 NM_032847 ENSG00000189376 C8orf76 - chromosome 8 open reading frame 76 protein-coding chr3-887 chr3 14358505 14358715 + 19.2 0.000 Intergenic Intergenic -6042 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA chr2-1044 chr2 101151136 101151346 + 19.2 0.000 promoter-TSS (NR_135594) promoter-TSS (NR_135594) 206 NR_138475 11138 Hs.442657 NM_007063 ENSG00000204634 TBC1D8 AD3|GRAMD8|HBLP1|TBC1D8A|VRP TBC1 domain family member 8 protein-coding chr1-1893 chr1 178388647 178388857 + 19.2 0.000 intron (NM_004841, intron 1 of 15) intron (NM_004841, intron 1 of 15) 47301 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr14-762 chr14 102482365 102482575 + 19.2 0.000 intron (NM_014844, intron 17 of 19) HAL1|LINE|L1 27306 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr3-1520 chr3 156483545 156483755 + 19.2 0.000 intron (NM_172159, intron 8 of 13) LTR102_Mam|LTR|ERVL -36714 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr6-684 chr6 166595458 166595668 + 19.2 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 31688 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr1-2009 chr1 54715825 54716035 + 19.2 0.000 promoter-TSS (NM_004623) promoter-TSS (NM_004623) 69 NM_004623 7268 Hs.412482 NM_004623 ENSG00000243725 TTC4 CNS1 tetratricopeptide repeat domain 4 protein-coding chr1-2728 chr1 9321333 9321543 + 19.2 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 28544 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr11-945 chr11 126113711 126113921 + 19.2 0.000 Intergenic Intergenic -50524 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr3-871 chr3 171460523 171460733 + 19.2 0.000 promoter-TSS (NM_001161562) promoter-TSS (NM_001161562) -220 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr4-762 chr4 13920956 13921166 + 19.2 0.000 intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -190907 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr14-780 chr14 52080653 52080863 + 19.2 0.000 Intergenic Intergenic -11699 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr11-882 chr11 78370882 78371092 + 19.2 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) -29107 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr4-659 chr4 3402820 3403030 + 19.2 0.000 intron (NM_002926, intron 4 of 16) intron (NM_002926, intron 4 of 16) 32727 NM_198227 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr5-831 chr5 35479114 35479324 + 19.2 0.000 Intergenic L2a|LINE|L2 -138644 NM_144722 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr9-442 chr9 122991514 122991724 + 19.2 0.000 intron (NM_012197, intron 6 of 25) AluJr|SINE|Alu -42024 NM_005294 2844 Hs.722039 NM_005294 ENSG00000011454 GPR21 - G protein-coupled receptor 21 protein-coding chr18-241 chr18 12238810 12239020 + 19.2 0.000 Intergenic L1ME2|LINE|L1 -15446 NR_134607 1149 Hs.249129 NM_001279 ENSG00000176194 CIDEA CIDE-A cell death inducing DFFA like effector a protein-coding chr12-572 chr12 64451857 64452067 + 19.2 0.000 promoter-TSS (NM_013254) promoter-TSS (NM_013254) -158 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr6-782 chr6 106519621 106519831 + 19.2 0.000 exon (NM_001624, exon 2 of 20) exon (NM_001624, exon 2 of 20) 7871 NM_001624 202 Hs.724262 NM_001624 ENSG00000112297 CRYBG1 AIM1|ST4 crystallin beta-gamma domain containing 1 protein-coding chr8-265 chr8 17001491 17001701 + 19.2 0.000 intron (NM_019851, intron 1 of 2) CpG 749 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr2-1714 chr2 205650496 205650706 + 19.2 0.000 Intergenic Intergenic -31899 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr6-503 chr6 135181779 135181989 + 19.2 0.000 intron (NR_134962, intron 1 of 14) CpG 576 NM_001161659 4602 Hs.606320 NM_005375 ENSG00000118513 MYB Cmyb|c-myb|c-myb_CDS|efg MYB proto-oncogene, transcription factor protein-coding chr17-737 chr17 78329568 78329778 + 19.2 0.000 Intergenic Intergenic 30406 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr6-187 chr6 3258732 3258942 + 19.2 0.000 promoter-TSS (NM_001128591) promoter-TSS (NM_001128591) -110 NM_001135750 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr21-153 chr21 38645408 38645618 + 19.2 0.000 intron (NM_001243432, intron 1 of 11) intron (NM_001243432, intron 1 of 11) 15154 NM_001243428 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr3-645 chr3 150370134 150370344 + 19.2 0.000 Intergenic Intergenic -38059 NM_014779 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr11-900 chr11 35530135 35530345 + 19.2 0.000 promoter-TSS (NM_001282675) promoter-TSS (NM_001282675) 60 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr7-893 chr7 14834508 14834718 + 19.2 0.000 intron (NM_001350717, intron 2 of 24) MLT1I|LTR|ERVL-MaLR 6837 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr1-1180 chr1 6206091 6206301 + 19.2 0.000 promoter-TSS (NR_125997) promoter-TSS (NR_125997) 77 NM_207396 388591 Hs.716549 NM_173795 ENSG00000158286 RNF207 C1orf188 ring finger protein 207 protein-coding chr1-2144 chr1 8396958 8397168 + 19.2 0.000 intron (NM_001042681, intron 12 of 22) intron (NM_001042681, intron 12 of 22) 26769 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr7-1183 chr7 41916629 41916839 + 19.2 0.000 Intergenic OldhAT1|DNA|hAT-Ac -213644 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr3-897 chr3 72186184 72186394 + 19.2 0.000 Intergenic Intergenic 35032 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr7-543 chr7 101856906 101857116 + 19.2 0.000 intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 39385 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr8-779 chr8 47735301 47735511 + 19.2 0.000 exon (NM_001282916, exon 19 of 19) exon (NM_001282916, exon 19 of 19) 2758 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr22-393 chr22 46135436 46135646 + 19.2 0.000 Intergenic (CCAGCC)n|Simple_repeat|Simple_repeat -14985 NM_005036 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr19-786 chr19 1590868 1591078 + 19.2 0.000 intron (NM_001281454, intron 1 of 6) intron (NM_001281454, intron 1 of 6) 1892 NM_001281453 53615 Hs.178728 NM_003926 ENSG00000071655 MBD3 - methyl-CpG binding domain protein 3 protein-coding chr2-2066 chr2 200357125 200357335 + 19.2 0.000 intron (NM_001282743, intron 2 of 11) intron (NM_001282743, intron 2 of 11) 48280 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr3-1061 chr3 37936291 37936501 + 19.2 0.000 intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) -33008 NR_029499 407015 NR_029499 ENSG00000199075 MIR26A1 MIR26A|MIRN26A1|mir-26a-1 microRNA 26a-1 ncRNA chr4-1124 chr4 137359519 137359729 + 19.2 0.000 Intergenic Intergenic -146825 NR_149105 105377441 Hs.668386 NR_149105 LINC02511 - long intergenic non-protein coding RNA 2511 ncRNA chr11-1283 chr11 77107996 77108206 + 19.2 0.000 intron (NM_004055, intron 3 of 12) intron (NM_004055, intron 3 of 12) 5261 NM_006189 4975 Hs.673853 NM_006189 ENSG00000254550 OMP - olfactory marker protein protein-coding chr17-1251 chr17 29390510 29390720 + 19.2 0.000 promoter-TSS (NM_020791) promoter-TSS (NM_020791) -47 NR_039749 100616122 NR_039749 ENSG00000284162 MIR4523 - microRNA 4523 ncRNA chr17-966 chr17 79401086 79401296 + 19.2 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 114957 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr10-732 chr10 32347211 32347421 + 19.2 0.000 promoter-TSS (NR_104159) promoter-TSS (NR_104159) -48 NR_104163 102031319 Hs.128132 NR_104163 ENSG00000229327 LOC102031319 - uncharacterized LOC102031319 ncRNA chr6-399 chr6 163814678 163814888 + 19.2 0.000 Intergenic Intergenic -143299 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chrX-184 chrX 119791715 119791925 + 19.2 0.000 promoter-TSS (NM_001000) promoter-TSS (NM_001000) -190 NM_001000 6170 Hs.300141 NM_001000 ENSG00000198918 RPL39 L39|RPL39P42|RPL39_23_1806 ribosomal protein L39 protein-coding chr12-540 chr12 55721296 55721506 + 19.2 0.000 exon (NM_001199771, exon 2 of 5) exon (NM_001199771, exon 2 of 5) 1008 NM_002905 5959 Hs.600940 NM_002905 ENSG00000135437 RDH5 9cRDH|HSD17B9|RDH1|SDR9C5 retinol dehydrogenase 5 protein-coding chr3-1397 chr3 117706099 117706309 + 19.2 0.000 Intergenic Intergenic -15279 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr19-1505 chr19 48513887 48514097 + 19.2 0.000 promoter-TSS (NM_001080434) promoter-TSS (NM_001080434) -803 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr10-557 chr10 124000734 124000944 + 19.2 0.000 Intergenic MER74A|LTR|ERVL 91567 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr2-1292 chr2 178480381 178480591 + 19.2 0.000 promoter-TSS (NM_019091) promoter-TSS (NM_019091) 29 NM_019091 65977 Hs.41086 NM_019091 ENSG00000116095 PLEKHA3 FAPP1 pleckstrin homology domain containing A3 protein-coding chr1-3216 chr1 172654626 172654836 + 19.2 0.000 Intergenic Intergenic -4277 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr1-1134 chr1 200891214 200891424 + 19.1 0.000 promoter-TSS (NM_018265) promoter-TSS (NM_018265) -212 NM_018265 55765 Hs.518997 NM_018265 ENSG00000163362 INAVA C1orf106 innate immunity activator protein-coding chr11-1271 chr11 48055639 48055849 + 19.1 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) -41038 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr1-2750 chr1 44423777 44423987 + 19.1 0.000 promoter-TSS (NM_001319957) promoter-TSS (NM_001319957) -119 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr6-774 chr6 43059373 43059583 + 19.1 0.000 promoter-TSS (NM_201523) promoter-TSS (NM_201523) -44 NM_015950 51069 Hs.55041 NM_015950 ENSG00000112651 MRPL2 CGI-22|MRP-L14|RPML14 mitochondrial ribosomal protein L2 protein-coding chr10-978 chr10 115772827 115773037 + 19.1 0.000 intron (NM_207303, intron 27 of 28) intron (NM_207303, intron 27 of 28) 421857 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr3-1220 chr3 78506726 78506936 + 19.1 0.000 Intergenic Intergenic -457868 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr1-2434 chr1 9893308 9893518 + 19.1 0.000 intron (NM_020248, intron 1 of 5) intron (NM_020248, intron 1 of 5) 16856 NM_001012329 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr2-1154 chr2 127294163 127294373 + 19.1 0.000 promoter-TSS (NM_000122) promoter-TSS (NM_000122) -92 NM_000122 2071 Hs.469872 NM_000122 ENSG00000163161 ERCC3 BTF2|GTF2H|RAD25|TFIIH|TTD2|XPB ERCC excision repair 3, TFIIH core complex helicase subunit protein-coding chr2-914 chr2 201932096 201932306 + 19.1 0.000 Intergenic Intergenic -102386 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr1-1501 chr1 11977668 11977878 + 19.1 0.000 Intergenic Intergenic -2408 NM_014874 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr1-2280 chr1 240998142 240998352 + 19.1 0.000 intron (NM_001350116, intron 3 of 16) L1MDa|LINE|L1 -134025 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr7-646 chr7 44986454 44986664 + 19.1 0.000 non-coding (NR_152597, exon 1 of 3) non-coding (NR_152597, exon 1 of 3) 137 NR_152594 285958 Hs.25892 NR_003697 ENSG00000232956 SNHG15 C7orf40|Linc-Myo1g|MYO1GUT small nucleolar RNA host gene 15 ncRNA chr17-1893 chr17 61308425 61308635 + 19.1 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 59174 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr2-1758 chr2 110655809 110656019 + 19.1 0.000 exon (NM_004336, exon 16 of 25) exon (NM_004336, exon 16 of 25) 2335 NR_132975 106635550 NR_132975 SNORD132 - small nucleolar RNA, C/D box 132 snoRNA chr3-759 chr3 37030532 37030742 + 19.1 0.000 intron (NM_001167617, intron 13 of 18) intron (NM_001167617, intron 13 of 18) 37287 NM_001354626 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding chr3-2356 chr3 154886492 154886702 + 19.1 0.000 Intergenic Intergenic -137527 NM_001354642 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr10-1387 chr10 58625171 58625381 + 19.1 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -89739 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr20-456 chr20 47356644 47356854 + 19.1 0.000 promoter-TSS (NM_001281778) promoter-TSS (NM_001281778) -50 NM_001281779 23613 Hs.446240 NM_012408 ENSG00000101040 ZMYND8 PRKCBP1|PRO2893|RACK7 zinc finger MYND-type containing 8 protein-coding chr4-288 chr4 55949190 55949400 + 19.1 0.000 intron (NM_025009, intron 1 of 25) CpG 350 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr17-1477 chr17 80967851 80968061 + 19.1 0.000 non-coding (NR_148968, exon 2 of 2) non-coding (NR_148968, exon 2 of 2) 3257 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr17-1013 chr17 15263020 15263230 + 19.1 0.000 promoter-TSS (NM_001281455) promoter-TSS (NM_001281455) -536 NM_001281455 5376 Hs.372031 NM_000304 ENSG00000109099 PMP22 CIDP|CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110 peripheral myelin protein 22 protein-coding chr7-864 chr7 76166668 76166878 + 19.1 0.000 Intergenic CpG -35123 NM_001291831 222183 Hs.511025 NM_001039212 ENSG00000177679 SRRM3 - serine/arginine repetitive matrix 3 protein-coding chr11-1725 chr11 96213565 96213775 + 19.1 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -127768 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr10-1218 chr10 30353862 30354072 + 19.1 0.000 Intergenic Intergenic -4629 NM_018109 55149 Hs.173946 NM_018109 ENSG00000107951 MTPAP PAPD1|SPAX4|TENT6 mitochondrial poly(A) polymerase protein-coding chr8-148 chr8 23163499 23163709 + 19.1 0.000 intron (NM_003840, intron 1 of 8) CpG 423 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr1-3404 chr1 228228926 228229136 + 19.1 0.000 intron (NM_052843, intron 9 of 80) L1MB7|LINE|L1 -15367 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr1-1020 chr1 203512927 203513137 + 19.1 0.000 Intergenic Intergenic 18879 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr5-247 chr5 134114460 134114670 + 19.1 0.000 promoter-TSS (NM_003202) promoter-TSS (NM_003202) -116 NM_003202 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr5-401 chr5 140043228 140043438 + 19.1 0.000 promoter-TSS (NM_013981) promoter-TSS (NM_013981) -34 NM_013981 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr12-647 chr12 41189922 41190132 + 19.1 0.000 intron (NM_001164595, intron 1 of 9) intron (NM_001164595, intron 1 of 9) 1707 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr6-1184 chr6 142013412 142013622 + 19.1 0.000 Intergenic L4_A_Mam|LINE|RTE-X 75282 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr13-448 chr13 45371113 45371323 + 19.1 0.000 intron (NR_024458, intron 4 of 10) intron (NR_024458, intron 4 of 10) 29873 NR_024458 100190939 Hs.375766 NR_024458 TPT1-AS1 - TPT1 antisense RNA 1 ncRNA chr3-451 chr3 9769816 9770026 + 19.1 0.000 promoter-TSS (NM_003656) promoter-TSS (NM_003656) 26 NM_003656 8536 Hs.434875 NM_003656 ENSG00000134072 CAMK1 CAMKI calcium/calmodulin dependent protein kinase I protein-coding chr14-424 chr14 90795663 90795873 + 19.1 0.000 intron (NM_001320421, intron 1 of 20) intron (NM_001320421, intron 1 of 20) 20649 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr7-442 chr7 85186903 85187113 + 19.1 0.000 Intergenic Intergenic -65077 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr11-1472 chr11 111793910 111794120 + 19.1 0.000 intron (NM_001352420, intron 14 of 15) intron (NM_001352420, intron 14 of 15) -27626 NM_001177563 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr1-2095 chr1 107936578 107936788 + 19.1 0.000 intron (NM_006113, intron 1 of 26) intron (NM_006113, intron 1 of 26) -27760 NR_046653 100873946 Hs.568676 NR_046653 ENSG00000230489 VAV3-AS1 - VAV3 antisense RNA 1 ncRNA chr2-2063 chr2 196278575 196278785 + 19.1 0.000 intron (NM_020760, intron 14 of 28) intron (NM_020760, intron 14 of 28) 18656 NR_110226 101927482 Hs.191841 NR_110225 HECW2-AS1 - HECW2 antisense RNA 1 ncRNA chr5-1884 chr5 150017754 150017964 + 19.1 0.000 intron (NM_014983, intron 5 of 19) intron (NM_014983, intron 5 of 19) 17120 NM_001366501 22993 Hs.719189 NM_014983 ENSG00000113716 HMGXB3 HMGX3|SMF HMG-box containing 3 protein-coding chr10-608 chr10 76432367 76432577 + 19.1 0.000 intron (NM_001305581, intron 6 of 6) intron (NM_001305581, intron 6 of 6) -455572 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr22-263 chr22 44684745 44684955 + 19.1 0.000 intron (NM_001198721, intron 2 of 9) intron (NM_001198721, intron 2 of 9) 7765 NM_015366 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr13-198 chr13 102592139 102592349 + 19.1 0.000 Intergenic LTR16B2|LTR|ERVL -4742 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr3-1277 chr3 10192926 10193136 + 19.1 0.000 intron (NM_001570, intron 2 of 12) intron (NM_001570, intron 2 of 12) 28112 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr4-714 chr4 112297160 112297370 + 19.1 0.000 promoter-TSS (NM_001253884) promoter-TSS (NM_001253884) -78 NM_001253884 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr1-1333 chr1 214661065 214661275 + 19.1 0.000 intron (NM_016343, intron 19 of 19) intron (NM_016343, intron 19 of 19) 57975 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr16-681 chr16 4850393 4850603 + 19.1 0.000 intron (NM_001288656, intron 1 of 16) intron (NM_001288656, intron 1 of 16) 2118 NM_001288656 29855 Hs.440219 NM_016936 ENSG00000118900 UBN1 VT|VT4 ubinuclein 1 protein-coding chr16-945 chr16 68065133 68065343 + 19.1 0.000 intron (NM_017803, intron 8 of 16) intron (NM_017803, intron 8 of 16) -20132 NM_004555 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr10-1509 chr10 24929271 24929481 + 19.1 0.000 intron (NM_020200, intron 3 of 8) intron (NM_020200, intron 3 of 8) 23230 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr4-1042 chr4 43053055 43053265 + 19.1 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 159894 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr7-1427 chr7 43879577 43879787 + 19.1 0.000 intron (NM_001077663, intron 5 of 5) intron (NM_001077663, intron 5 of 5) -10165 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr12-765 chr12 106841738 106841948 + 19.1 0.000 intron (NR_147137, intron 4 of 10) intron (NR_147137, intron 4 of 10) -67012 NR_040246 100287944 Hs.742087 NR_040246 ENSG00000257545 LOC100287944 - uncharacterized LOC100287944 ncRNA chr5-1032 chr5 145854889 145855099 + 19.1 0.000 Intergenic Intergenic 17974 NM_001080516 643226 Hs.570895 NM_001080516 ENSG00000204928 GRXCR2 DFNB101 glutaredoxin and cysteine rich domain containing 2 protein-coding chr22-545 chr22 39176073 39176283 + 19.1 0.000 Intergenic Intergenic -23498 NM_175709 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr2-1635 chr2 18652522 18652732 + 19.1 0.000 Intergenic Intergenic -63047 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr10-894 chr10 102710659 102710869 + 19.1 0.000 intron (NM_004311, intron 1 of 5) intron (NM_004311, intron 1 of 5) 3633 NM_004311 403 Hs.182215 NM_004311 ENSG00000138175 ARL3 ARFL3|JBTS35|RP83 ADP ribosylation factor like GTPase 3 protein-coding chr13-550 chr13 113406558 113406768 + 19.1 0.000 exon (NM_001304433, exon 2 of 2) exon (NM_001304433, exon 2 of 2) 7730 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr1-3081 chr1 26484169 26484379 + 19.1 0.000 Intergenic L2|LINE|L2 11834 NM_005517 3151 Hs.181163 NM_005517 ENSG00000198830 HMGN2 HMG17 high mobility group nucleosomal binding domain 2 protein-coding chr17-1215 chr17 8152351 8152561 + 19.1 0.000 promoter-TSS (NM_002616) promoter-TSS (NM_002616) -52 NM_002616 5187 Hs.445534 NM_002616 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian regulator 1 protein-coding chr2-960 chr2 172231881 172232091 + 19.1 0.000 Intergenic Intergenic 128980 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr17-619 chr17 82648481 82648691 + 19.1 0.000 promoter-TSS (NM_019613) promoter-TSS (NM_019613) -142 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr20-462 chr20 63594117 63594327 + 19.1 0.000 intron (NM_012384, intron 6 of 9) intron (NM_012384, intron 6 of 9) -19983 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chrX-247 chrX 115499395 115499605 + 19.1 0.000 Intergenic Intergenic -61674 NM_001282337 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr2-1622 chr2 234565288 234565498 + 19.1 0.000 Intergenic Intergenic -68312 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr7-1140 chr7 67223642 67223852 + 19.1 0.000 intron (NR_134540, intron 14 of 14) L1M4c|LINE|L1 78695 NR_022007 5382 Hs.712714 NR_022007 ENSG00000067601 PMS2P4 PMS2L4|PMS6 PMS1 homolog 2, mismatch repair system component pseudogene 4 pseudo chr5-717 chr5 93503833 93504043 + 19.1 0.000 intron (NR_109825, intron 5 of 8) MER68|LTR|ERVL 67405 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr5-685 chr5 140726085 140726295 + 19.1 0.000 promoter-TSS (NR_026705) promoter-TSS (NR_026705) 31 NR_026705 56662 NR_026705 ENSG00000202515 VTRNA1-3 HVG3|VAULTRC3|VR3|hvg-3 vault RNA 1-3 ncRNA chr6-968 chr6 75449751 75449961 + 19.1 0.000 intron (NR_125859, intron 4 of 8) intron (NR_125859, intron 4 of 8) 21449 NR_039670 100616389 NR_039670 ENSG00000263533 MIR4463 - microRNA 4463 ncRNA chr15-228 chr15 76311268 76311478 + 19.1 0.000 promoter-TSS (NM_001127716) promoter-TSS (NM_001127716) 96 NM_001127716 2108 Hs.39925 NM_000126 ENSG00000140374 ETFA EMA|GA2|MADD electron transfer flavoprotein subunit alpha protein-coding chr8-685 chr8 120373081 120373291 + 19.1 0.000 3' UTR (NM_021110, exon 48 of 48) 3' UTR (NM_021110, exon 48 of 48) 71964 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr12-871 chr12 51886043 51886253 + 19.1 0.000 Intergenic Intergenic -1955 NM_001304459 341405 Hs.433492 NM_182608 ENSG00000167612 ANKRD33 C12orf7|PANKY ankyrin repeat domain 33 protein-coding chr4-615 chr4 94582631 94582841 + 19.1 0.000 intron (NM_001011516, intron 6 of 9) intron (NM_001011516, intron 6 of 9) 130794 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr5-564 chr5 57173651 57173861 + 19.1 0.000 promoter-TSS (NM_001331037) promoter-TSS (NM_001331037) -192 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr6-1145 chr6 159716743 159716953 + 19.1 0.000 intron (NM_001322817, intron 3 of 7) intron (NM_001322817, intron 3 of 7) 10102 NM_001322820 6648 Hs.487046 NM_000636 ENSG00000112096 SOD2 IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD superoxide dismutase 2 protein-coding chr6-686 chr6 2376976 2377186 + 19.1 0.000 intron (NR_046229, intron 4 of 6) intron (NR_046229, intron 4 of 6) 131328 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr7-670 chr7 6348575 6348785 + 19.1 0.000 5' UTR (NM_001037163, exon 1 of 2) 5' UTR (NM_001037163, exon 1 of 2) 287 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chr7-1428 chr7 44105433 44105643 + 19.1 0.000 intron (NM_001129, intron 1 of 20) intron (NM_001129, intron 1 of 20) 1193 NM_001129 165 Hs.439463 NM_001129 ENSG00000106624 AEBP1 ACLP AE binding protein 1 protein-coding chr11-917 chr11 122856705 122856915 + 19.1 0.000 intron (NM_019604, intron 5 of 9) intron (NM_019604, intron 5 of 9) -5521 NM_001304782 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr15-393 chr15 48542028 48542238 + 19.1 0.000 intron (NM_000138, intron 6 of 65) intron (NM_000138, intron 6 of 65) 103655 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr15-442 chr15 67150491 67150701 + 19.1 0.000 intron (NM_001145103, intron 1 of 8) intron (NM_001145103, intron 1 of 8) 12575 NM_001145103 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr20-330 chr20 50929391 50929601 + 19.1 0.000 intron (NM_001282531, intron 1 of 5) intron (NM_001282531, intron 1 of 5) -1488 NR_110008 101927631 Hs.301898 NR_110007 ENSG00000259456 ADNP-AS1 - ADNP antisense RNA 1 ncRNA chr3-1276 chr3 9384535 9384745 + 19.1 0.000 TTS (NR_132781) TTS (NR_132781) 11983 NR_132781 440944 Hs.598958 NM_001013713 ENSG00000206573 THUMPD3-AS1 SETD5-AS1 THUMPD3 antisense RNA 1 ncRNA chr9-297 chr9 128456073 128456283 + 19.1 0.000 promoter-TSS (NM_153437) promoter-TSS (NM_153437) 26 NM_001351582 4957 Hs.129055 NM_002540 ENSG00000136811 ODF2 CT134|ODF2/1|ODF2/2|ODF84 outer dense fiber of sperm tails 2 protein-coding chr11-1041 chr11 4044187 4044397 + 19.1 0.000 intron (NM_001277962, intron 3 of 12) intron (NM_001277962, intron 3 of 12) -50393 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr17-612 chr17 50397545 50397755 + 19.1 0.000 promoter-TSS (NM_018509) promoter-TSS (NM_018509) -127 NM_018509 55379 Hs.370927 NM_018509 ENSG00000108829 LRRC59 PRO1855|p34 leucine rich repeat containing 59 protein-coding chr1-1449 chr1 233113137 233113347 + 19.1 0.000 intron (NM_014801, intron 21 of 33) intron (NM_014801, intron 21 of 33) 162400 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr7-724 chr7 2242540 2242750 + 19.1 0.000 promoter-TSS (NM_198953) promoter-TSS (NM_198953) -260 NM_198954 4521 Hs.534331 NM_002452 ENSG00000106268 NUDT1 MTH1 nudix hydrolase 1 protein-coding chr2-1036 chr2 43086641 43086851 + 19.1 0.000 Intergenic Intergenic 15699 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chr14-538 chr14 29240082 29240292 + 19.1 0.000 Intergenic Intergenic -454400 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr2-1972 chr2 19313013 19313223 + 19.1 0.000 Intergenic Intergenic -35311 NR_039914 100616307 NR_039914 ENSG00000266738 MIR4757 - microRNA 4757 ncRNA chr5-703 chr5 61805199 61805409 + 19.1 0.000 Intergenic Intergenic -69606 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr16-326 chr16 69385806 69386016 + 19.1 0.000 promoter-TSS (NM_005652) promoter-TSS (NM_005652) 96 NM_005652 7014 Hs.63335 NM_005652 ENSG00000132604 TERF2 TRBF2|TRF2 telomeric repeat binding factor 2 protein-coding chr1-2057 chr1 9231720 9231930 + 19.1 0.000 Intergenic MIRc|SINE|MIR -2949 NM_004285 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr3-1429 chr3 8856811 8857021 + 19.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL -87302 NM_001354653 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr8-615 chr8 76733230 76733440 + 19.1 0.000 intron (NM_024721, intron 3 of 10) LFSINE_Vert|SINE|tRNA -50060 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA chr9-708 chr9 122905090 122905300 + 19.1 0.000 5' UTR (NM_018835, exon 1 of 18) 5' UTR (NM_018835, exon 1 of 18) 164 NM_001354479 54542 Hs.533499 NM_018835 ENSG00000056586 RC3H2 MNAB|RNF164 ring finger and CCCH-type domains 2 protein-coding chr3-1399 chr3 122961222 122961432 + 19.1 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) 14807 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr1-1635 chr1 169312313 169312523 + 19.1 0.000 intron (NR_104229, intron 3 of 12) MLT1H2|LTR|ERVL-MaLR 55379 NM_013330 29922 Hs.706952 NM_013330 ENSG00000143156 NME7 CFAP67|MN23H7|NDK 7|NDK7|nm23-H7 NME/NM23 family member 7 protein-coding chr10-850 chr10 48497266 48497476 + 19.1 0.000 intron (NR_144642, intron 3 of 9) intron (NR_144642, intron 3 of 9) -3721 NM_001256026 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr11-1454 chr11 76371257 76371467 + 19.1 0.000 intron (NM_004705, intron 1 of 4) L2b|LINE|L2 9603 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr13-279 chr13 113292441 113292651 + 19.1 0.000 Intergenic LTR24|LTR|ERV1 -4693 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr9-581 chr9 133738183 133738393 + 19.1 0.000 promoter-TSS (NM_001134707) promoter-TSS (NM_001134707) 64 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-2084 chr1 58545983 58546193 + 19.1 0.000 intron (NM_145243, intron 1 of 8) intron (NM_145243, intron 1 of 8) 638 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr3-1531 chr3 177441730 177441940 + 19.1 0.000 promoter-TSS (NR_047568) promoter-TSS (NR_047568) -86 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr10-1102 chr10 77160671 77160881 + 19.1 0.000 intron (NM_001271519, intron 5 of 28) intron (NM_001271519, intron 5 of 28) 19945 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr2-3000 chr2 46257551 46257761 + 19.1 0.000 Intergenic Intergenic -39751 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr9-1188 chr9 108168518 108168728 + 19.1 0.000 Intergenic Intergenic -678854 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr9-625 chr9 136687082 136687292 + 19.1 0.000 exon (NM_001012727, exon 1 of 5) exon (NM_001012727, exon 1 of 5) 270 NM_006412 10555 Hs.320151 NM_006412 ENSG00000169692 AGPAT2 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 protein-coding chr16-727 chr16 75110635 75110845 + 19.1 0.000 3' UTR (NM_032268, exon 5 of 5) 3' UTR (NM_032268, exon 5 of 5) 6032 NM_194436 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr17-1853 chr17 19770048 19770258 + 19.1 0.000 TTS (NM_001142610) TTS (NM_001142610) -21855 NM_000691 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr9-922 chr9 134545799 134546009 + 19.1 0.000 Intergenic Intergenic -95901 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr15-417 chr15 42505098 42505308 + 19.1 0.000 intron (NM_130798, intron 1 of 6) AluSz|SINE|Alu 9569 NM_003825 8773 Hs.511149 NM_003825 ENSG00000092531 SNAP23 HsT17016|SNAP-23|SNAP23A|SNAP23B synaptosome associated protein 23 protein-coding chr14-684 chr14 99910611 99910821 + 19.1 0.000 intron (NM_004434, intron 12 of 21) L2c|LINE|L2 -60706 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr10-807 chr10 73209757 73209967 + 19.1 0.000 intron (NM_173348, intron 6 of 13) intron (NM_173348, intron 6 of 13) 37393 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding chr11-1019 chr11 76763678 76763888 + 19.1 0.000 Intergenic Intergenic -18530 NM_001258210 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr8-547 chr8 18197429 18197639 + 19.1 0.000 intron (NM_001160179, intron 2 of 4) MER20|DNA|hAT-Charlie -12569 NM_001160173 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr3-470 chr3 122384028 122384238 + 19.1 0.000 promoter-TSS (NM_014367) promoter-TSS (NM_014367) -49 NM_014367 26355 Hs.584881 NM_014367 ENSG00000114023 FAM162A C3orf28|E2IG5|HGTD-P family with sequence similarity 162 member A protein-coding chr2-1546 chr2 207993281 207993491 + 19.1 0.000 intron (NM_001080475, intron 2 of 7) intron (NM_001080475, intron 2 of 7) 32141 NM_001080475 389072 Hs.159188 NM_001080475 ENSG00000178385 PLEKHM3 DAPR|PLEKHM1L pleckstrin homology domain containing M3 protein-coding chr2-856 chr2 68319876 68320086 + 19.1 0.000 promoter-TSS (NM_015463) promoter-TSS (NM_015463) 70 NM_015463 25927 Hs.212885 NM_015463 ENSG00000119865 CNRIP1 C2orf32|CRIP1 cannabinoid receptor interacting protein 1 protein-coding chr1-1418 chr1 19386139 19386349 + 19.1 0.000 intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 73918 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr14-610 chr14 67584193 67584403 + 19.1 0.000 intron (NM_020715, intron 26 of 28) intron (NM_020715, intron 26 of 28) 15970 NM_004569 5283 Hs.553497 NM_004569 ENSG00000100564 PIGH GPI-H phosphatidylinositol glycan anchor biosynthesis class H protein-coding chr2-1961 chr2 237384030 237384240 + 19.1 0.000 intron (NM_057164, intron 2 of 6) intron (NM_057164, intron 2 of 6) 30029 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr1-3220 chr1 176831304 176831514 + 19.1 0.000 intron (NM_020318, intron 21 of 22) intron (NM_020318, intron 21 of 22) 198036 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr15-493 chr15 52077055 52077265 + 19.1 0.000 Intergenic Intergenic 35615 NM_001306168 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr3-1186 chr3 196081220 196081430 + 19.1 0.000 intron (NM_001313966, intron 1 of 16) intron (NM_001313966, intron 1 of 16) 765 NM_001128148 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr17-844 chr17 3935144 3935354 + 19.1 0.000 exon (NM_174957, exon 17 of 21) exon (NM_174957, exon 17 of 21) -18784 NM_002558 5023 Hs.41735 NM_002558 ENSG00000108405 P2RX1 P2X1 purinergic receptor P2X 1 protein-coding GL000225.1-17 GL000225.1 31860 32070 + 19.1 0.000 NA NA NA NA chr8-603 chr8 129241185 129241395 + 19.1 0.000 promoter-TSS (NR_033916) promoter-TSS (NR_033916) -50 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA chr12-641 chr12 124685101 124685311 + 19.1 0.000 Intergenic Intergenic -117594 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr4-516 chr4 140856825 140857035 + 19.1 0.000 Intergenic Intergenic -100545 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr2-1370 chr2 10790789 10790999 + 19.1 0.000 intron (NM_001282704, intron 8 of 14) AluJb|SINE|Alu 21891 NM_005742 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr11-1253 chr11 111069160 111069370 + 19.1 0.000 Intergenic Intergenic 28053 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr4-723 chr4 156169088 156169298 + 19.1 0.000 Intergenic LTR41B|LTR|ERVL -215327 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr1-971 chr1 36464254 36464464 + 19.1 0.000 promoter-TSS (NM_031280) promoter-TSS (NM_031280) 25 NM_031280 64960 Hs.352839 NM_031280 ENSG00000116898 MRPS15 DC37|MPR-S15|RPMS15|S15mt mitochondrial ribosomal protein S15 protein-coding chr2-496 chr2 74833989 74834199 + 19.1 0.000 5' UTR (NM_000189, exon 1 of 18) 5' UTR (NM_000189, exon 1 of 18) 1439 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr9-1756 chr9 130866551 130866761 + 19.1 0.000 intron (NM_007313, intron 4 of 10) intron (NM_007313, intron 4 of 10) 30156 NM_198180 347148 Hs.660704 NM_198180 ENSG00000188710 QRFP 26RFa|P518 pyroglutamylated RFamide peptide protein-coding chr11-1453 chr11 76153527 76153737 + 19.1 0.000 Intergenic Intergenic 52870 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr1-2860 chr1 172969632 172969842 + 19.1 0.000 Intergenic Intergenic 81226 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr4-739 chr4 86508638 86508848 + 19.1 0.000 Intergenic MER65-int|LTR|ERV1 33809 NR_039657 100616463 NR_039657 ENSG00000266515 MIR4452 - microRNA 4452 ncRNA chr2-1085 chr2 150076113 150076323 + 19.1 0.000 Intergenic Intergenic 180789 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr3-1001 chr3 49351810 49352020 + 19.1 0.000 Intergenic Intergenic 6438 NM_001329502 2876 Hs.76686 NM_000581 ENSG00000233276 GPX1 GPXD|GSHPX1 glutathione peroxidase 1 protein-coding chr10-1519 chr10 43825042 43825252 + 19.1 0.000 Intergenic Intergenic -20159 NR_033923 414260 Hs.351856 NR_033923 ENSG00000226808 LINC00619 C10orf136|bA168P8.1 long intergenic non-protein coding RNA 619 ncRNA chr12-655 chr12 56468484 56468694 + 19.1 0.000 promoter-TSS (NM_207344) promoter-TSS (NM_207344) 11 NM_207344 283377 Hs.128676 NM_207344 ENSG00000176422 SPRYD4 - SPRY domain containing 4 protein-coding chr6-349 chr6 158168184 158168394 + 19.1 0.000 promoter-TSS (NR_073096) promoter-TSS (NR_073096) -27 NR_073096 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr15-960 chr15 41860954 41861164 + 19.1 0.000 intron (NM_016642, intron 46 of 67) intron (NM_016642, intron 46 of 67) 5492 NR_036195 100423013 NR_036195 ENSG00000264850 MIR4310 - microRNA 4310 ncRNA chr9-1353 chr9 133650955 133651165 + 19.1 0.000 intron (NM_000787, intron 6 of 11) intron (NM_000787, intron 6 of 11) 6348 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr1-1583 chr1 30756693 30756903 + 19.1 0.000 intron (NM_006762, intron 1 of 7) L3b|LINE|CR1 976 NM_006762 7805 Hs.371021 NM_006762 ENSG00000162511 LAPTM5 CLAST6 lysosomal protein transmembrane 5 protein-coding chr15-92 chr15 66701264 66701474 + 19.1 0.000 promoter-TSS (NR_027654) promoter-TSS (NR_027654) -867 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr5-1547 chr5 40587456 40587666 + 19.1 0.000 Intergenic LTR82A|LTR|ERVL -92354 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr17-1002 chr17 77331547 77331757 + 19.1 0.000 intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) 12137 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr22-344 chr22 42519628 42519838 + 19.1 0.000 promoter-TSS (NM_015703) promoter-TSS (NM_015703) 63 NM_015703 27341 Hs.745006 NM_015703 ENSG00000189306 RRP7A BK126B4.3|CGI-96|Rrp7 ribosomal RNA processing 7 homolog A protein-coding chr17-449 chr17 68205470 68205680 + 19.1 0.000 promoter-TSS (NM_001346481) promoter-TSS (NM_001346481) -554 NM_001346471 51321 Hs.293560 NM_016627 ENSG00000196704 AMZ2 - archaelysin family metallopeptidase 2 protein-coding chr3-1257 chr3 172221613 172221823 + 19.1 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 181187 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr18-292 chr18 3466261 3466471 + 19.1 0.000 intron (NR_110428, intron 1 of 2) intron (NR_110428, intron 1 of 2) 116 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr5-788 chr5 9658812 9659022 + 19.1 0.000 intron (NR_027112, intron 11 of 12) intron (NR_027112, intron 11 of 12) -28566 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr2-794 chr2 219176996 219177206 + 19.1 0.000 promoter-TSS (NM_015680) promoter-TSS (NM_015680) 73 NM_001321391 27013 Hs.4973 NM_015680 ENSG00000115649 CNPPD1 C2orf24|CGI-57 cyclin Pas1/PHO80 domain containing 1 protein-coding chr19-1350 chr19 44259749 44259959 + 19.1 0.000 promoter-TSS (NM_001330529) promoter-TSS (NM_001330529) -26 NM_001207005 353355 Hs.466891 NM_181756 ENSG00000159915 ZNF233 - zinc finger protein 233 protein-coding chr1-1588 chr1 33470536 33470746 + 19.1 0.000 Intergenic Intergenic -2004 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr2-1353 chr2 225091416 225091626 + 19.1 0.000 Intergenic Intergenic -49053 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr6-787 chr6 125919116 125919326 + 19.1 0.000 promoter-TSS (NM_001199622) promoter-TSS (NM_001199622) -34 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr7-1067 chr7 39229073 39229283 + 19.1 0.000 intron (NM_001370959, intron 4 of 9) intron (NM_001370959, intron 4 of 9) 99956 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr16-1337 chr16 57168137 57168347 + 19.1 0.000 intron (NM_001354088, intron 5 of 7) intron (NM_001354088, intron 5 of 7) 14308 NM_001354101 80011 Hs.396740 NM_024946 ENSG00000172775 FAM192A C16orf94|CDA018|CDA10|NIP30|PIP30 family with sequence similarity 192 member A protein-coding chr5-923 chr5 141507946 141508156 + 19.1 0.000 intron (NM_018923, intron 3 of 3) intron (NM_018923, intron 3 of 3) 18810 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr18-84 chr18 79988578 79988788 + 19.1 0.000 promoter-TSS (NM_001303471) promoter-TSS (NM_001303471) -120 NR_131177 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding chr8-946 chr8 67064865 67065075 + 19.1 0.000 intron (NM_001363133, intron 1 of 27) CpG 578 NM_001363133 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr9-1668 chr9 35756788 35756998 + 19.1 0.000 3' UTR (NM_001080496, exon 9 of 9) 3' UTR (NM_001080496, exon 9 of 9) -2617 NM_001044264 692094 Hs.571601 NM_001044264 ENSG00000215183 MSMP PSMP microseminoprotein, prostate associated protein-coding chr19-1102 chr19 1288152 1288362 + 19.1 0.000 intron (NM_001405, intron 1 of 3) intron (NM_001405, intron 1 of 3) 2384 NM_001405 1943 NM_001405 ENSG00000099617 EFNA2 ELF-1|EPLG6|HEK7-L|LERK-6|LERK6 ephrin A2 protein-coding chr9-795 chr9 137313405 137313615 + 19.1 0.000 intron (NM_017820, intron 19 of 21) intron (NM_017820, intron 19 of 21) -11239 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr3-1036 chr3 160450917 160451127 + 19.1 0.000 intron (NR_148403, intron 1 of 20) LTR24|LTR|ERV1 -1184 NR_148401 100174949 NR_148401 ENSG00000248710 TRIM59-IFT80 IFT80-L TRIM59-IFT80 protein ncRNA chr18-514 chr18 44564987 44565197 + 19.1 0.000 Intergenic Intergenic 33313 NR_131768 105667213 Hs.135737 NR_131768 LINC01601 - long intergenic non-protein coding RNA 1601 ncRNA chr1-797 chr1 201983084 201983294 + 19.1 0.000 promoter-TSS (NM_001319182) promoter-TSS (NM_001319182) -172 NM_001319182 6051 Hs.497391 NM_020216 ENSG00000176393 RNPEP AP-B|APB arginyl aminopeptidase protein-coding chr3-390 chr3 124033273 124033483 + 19.1 0.000 Intergenic CpG -41208 NR_133917 54763 Hs.567516 NM_017578 ENSG00000065371 ROPN1 CT91|ODF6|RHPNAP1|ROPN1A|ropporin rhophilin associated tail protein 1 protein-coding chr13-482 chr13 75716859 75717069 + 19.1 0.000 intron (NM_005358, intron 3 of 29) intron (NM_005358, intron 3 of 29) -43356 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr2-2335 chr2 172405013 172405223 + 19.1 0.000 Intergenic Intergenic -22218 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr9-567 chr9 136094143 136094353 + 19.1 0.000 intron (NM_144653, intron 1 of 5) CpG 1041 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr1-1480 chr1 155051914 155052124 + 19.1 0.000 promoter-TSS (NR_040772) promoter-TSS (NR_040772) 703 NM_001261465 8751 Hs.312098 NM_003815 ENSG00000143537 ADAM15 MDC15 ADAM metallopeptidase domain 15 protein-coding chr6-1642 chr6 128696731 128696941 + 19.1 0.000 Intergenic Intergenic -176237 NM_001291982 5796 Hs.155919 NM_002844 ENSG00000152894 PTPRK R-PTP-kappa protein tyrosine phosphatase receptor type K protein-coding chr10-1365 chr10 125708017 125708227 + 19.0 0.000 non-coding (NR_033848, exon 5 of 5) non-coding (NR_033848, exon 5 of 5) 11371 NR_033847 399821 Hs.535286 NR_033847 ENSG00000224023 EDRF1-DT - EDRF1 divergent transcript ncRNA chr7-995 chr7 103347631 103347841 + 19.0 0.000 promoter-TSS (NM_002803) promoter-TSS (NM_002803) 93 NM_002803 5701 Hs.437366 NM_002803 ENSG00000161057 PSMC2 MSS1|Nbla10058|S7 proteasome 26S subunit, ATPase 2 protein-coding chr1-1317 chr1 145823943 145824153 + 19.0 0.000 promoter-TSS (NM_001303456) promoter-TSS (NM_001303456) 47 NM_014455 27246 Hs.523550 NM_014455 ENSG00000265491 RNF115 BCA2|ZNF364 ring finger protein 115 protein-coding chr11-840 chr11 79438158 79438368 + 19.0 0.000 intron (NM_001098816, intron 1 of 33) CpG 2767 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr19-1280 chr19 37312651 37312861 + 19.0 0.000 promoter-TSS (NR_138103) promoter-TSS (NR_138103) -81 NR_138103 284459 Hs.640243 NM_181786 ENSG00000181666 ZNF875 HKR1 zinc finger protein 875 protein-coding chr1-2547 chr1 9350349 9350559 + 19.0 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 57560 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr5-848 chr5 93677334 93677544 + 19.0 0.000 intron (NM_032042, intron 10 of 10) intron (NM_032042, intron 10 of 10) -56651 NR_031754 100313887 NR_031754 ENSG00000284336 MIR2277 mir-2277 microRNA 2277 ncRNA chr6-953 chr6 4055519 4055729 + 19.0 0.000 intron (NR_146785, intron 11 of 20) intron (NR_146785, intron 11 of 20) 23513 NM_173563 222826 Hs.657342 NM_173563 ENSG00000145975 FAM217A C6orf146 family with sequence similarity 217 member A protein-coding chr1-2545 chr1 9069194 9069404 + 19.0 0.000 intron (NM_003039, intron 1 of 11) intron (NM_003039, intron 1 of 11) 336 NM_001328621 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr16-1161 chr16 69340379 69340589 + 19.0 0.000 promoter-TSS (NM_032382) promoter-TSS (NM_032382) 712 NM_016101 51388 Hs.585728 NM_016101 ENSG00000132603 NIP7 CGI-37|HSPC031|KD93 nucleolar pre-rRNA processing protein NIP7 protein-coding chr12-1240 chr12 27077135 27077345 + 19.0 0.000 Intergenic Intergenic 5282 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr3-866 chr3 136512491 136512701 + 19.0 0.000 intron (NM_005862, intron 7 of 33) intron (NM_005862, intron 7 of 33) 239782 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr17-626 chr17 43483729 43483939 + 19.0 0.000 promoter-TSS (NM_001302623) promoter-TSS (NM_001302623) -31 NR_136225 1659 Hs.463105 NM_004941 ENSG00000067596 DHX8 DDX8|Dhr2|HRH1|PRP22|PRPF22 DEAH-box helicase 8 protein-coding chr1-2167 chr1 27405187 27405397 + 19.0 0.000 3' UTR (NM_001201404, exon 8 of 8) 3' UTR (NM_001201404, exon 8 of 8) 12670 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chr15-1014 chr15 78798489 78798699 + 19.0 0.000 intron (NM_014272, intron 2 of 23) intron (NM_014272, intron 2 of 23) 12870 NM_014272 11173 Hs.16441 NM_014272 ENSG00000136378 ADAMTS7 ADAM-TS 7|ADAM-TS7|ADAMTS-7 ADAM metallopeptidase with thrombospondin type 1 motif 7 protein-coding chr5-806 chr5 77292403 77292613 + 19.0 0.000 intron (NM_001029853, intron 1 of 20) L1M5|LINE|L1 81828 NM_001029853 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr11-1279 chr11 67650685 67650895 + 19.0 0.000 promoter-TSS (NM_080658) promoter-TSS (NM_080658) -60 NM_080658 91703 Hs.126265 NM_080658 ENSG00000132744 ACY3 ACY-3|HCBP1 aminoacylase 3 protein-coding chr5-375 chr5 134465932 134466142 + 19.0 0.000 Intergenic CpG -30990 NR_105044 102546229 NR_105044 LOC102546229 - uncharacterized LOC102546229 ncRNA chr14-832 chr14 49853878 49854088 + 19.0 0.000 promoter-TSS (NR_145670) promoter-TSS (NR_145670) -69 NR_145670 378707 NR_145670 ENSG00000278771 RN7SL3 7L30.2|RN7SL631P|RNSRP3 RNA component of signal recognition particle 7SL3 scRNA chr10-556 chr10 103619009 103619219 + 19.0 0.000 intron (NM_014631, intron 9 of 13) intron (NM_014631, intron 9 of 13) 59101 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr5-1174 chr5 33789010 33789220 + 19.0 0.000 intron (NM_001324511, intron 2 of 2) intron (NM_001324511, intron 2 of 2) 102875 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chr2-2217 chr2 108916239 108916449 + 19.0 0.000 intron (NM_022336, intron 5 of 11) intron (NM_022336, intron 5 of 11) 72876 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr7-1375 chr7 121961194 121961404 + 19.0 0.000 intron (NM_001206839, intron 2 of 28) intron (NM_001206839, intron 2 of 28) 88138 NM_001369396 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr4-987 chr4 127162829 127163039 + 19.0 0.000 Intergenic Intergenic -470023 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr15-688 chr15 100919819 100920029 + 19.0 0.000 promoter-TSS (NR_135827) promoter-TSS (NR_135827) 567 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr4-818 chr4 125187303 125187513 + 19.0 0.000 Intergenic Intergenic -129004 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr7-620 chr7 812899 813109 + 19.0 0.000 Intergenic Intergenic -2553 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr1-1329 chr1 184974295 184974505 + 19.0 0.000 5' UTR (NM_052966, exon 1 of 14) 5' UTR (NM_052966, exon 1 of 14) 108 NM_052966 116496 Hs.518662 NM_052966 ENSG00000135842 NIBAN1 C1orf24|FAM129A|GIG39|NIBAN niban apoptosis regulator 1 protein-coding chr11-2117 chr11 129790282 129790492 + 19.0 0.000 Intergenic L1MB4|LINE|L1 -25394 NM_001331211 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr17-1411 chr17 76467977 76468187 + 19.0 0.000 intron (NR_110548, intron 1 of 3) intron (NR_110548, intron 1 of 3) 479 NM_001088 15 Hs.431417 NM_001088 ENSG00000129673 AANAT DSPS|SNAT aralkylamine N-acetyltransferase protein-coding chr1-2313 chr1 70319864 70320074 + 19.0 0.000 intron (NM_030816, intron 3 of 12) intron (NM_030816, intron 3 of 12) 34753 NM_030816 81573 Hs.744989 NM_030816 ENSG00000118454 ANKRD13C dJ677H15.3 ankyrin repeat domain 13C protein-coding chr3-1398 chr3 120160210 120160420 + 19.0 0.000 Intergenic Intergenic -65868 NM_001354596 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr1-685 chr1 228406882 228407092 + 19.0 0.000 promoter-TSS (NM_145214) promoter-TSS (NM_145214) -152 NM_145214 81559 Hs.13543 NM_145214 ENSG00000154370 TRIM11 BIA1|RNF92 tripartite motif containing 11 protein-coding chr10-706 chr10 87342469 87342679 + 19.0 0.000 promoter-TSS (NR_024397) promoter-TSS (NR_024397) -16 NR_024397 728190 Hs.440648 NR_024397 ENSG00000223482 NUTM2A-AS1 FAM22A-AS1 NUTM2A antisense RNA 1 ncRNA chr6-804 chr6 34796076 34796286 + 19.0 0.000 intron (NM_017754, intron 1 of 20) intron (NM_017754, intron 1 of 20) 4098 NM_017754 54887 Hs.700656 NM_017754 ENSG00000065060 UHRF1BP1 C6orf107|ICBP90|dJ349A12.1 UHRF1 binding protein 1 protein-coding chr5-1067 chr5 159324414 159324624 + 19.0 0.000 intron (NM_002187, intron 2 of 7) MER5A|DNA|hAT-Charlie 5954 NM_002187 3593 Hs.674 NM_002187 ENSG00000113302 IL12B CLMF|CLMF2|IL-12B|IMD28|IMD29|NKSF|NKSF2 interleukin 12B protein-coding chr20-264 chr20 18288494 18288704 + 19.0 0.000 promoter-TSS (NM_003434) promoter-TSS (NM_003434) 72 NM_001283004 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr7-895 chr7 16891414 16891624 + 19.0 0.000 Intergenic Intergenic -9536 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr2-912 chr2 189179620 189179830 + 19.0 0.000 promoter-TSS (NM_000393) promoter-TSS (NM_000393) 36 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr6-403 chr6 127300478 127300688 + 19.0 0.000 intron (NM_001002030, intron 5 of 5) MLT1E2|LTR|ERVL-MaLR 33745 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr4-685 chr4 156942022 156942232 + 19.0 0.000 intron (NR_036641, intron 1 of 6) intron (NR_036641, intron 1 of 6) 29672 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr1-1584 chr1 30888535 30888745 + 19.0 0.000 intron (NM_014654, intron 1 of 4) intron (NM_014654, intron 1 of 4) 20118 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr2-307 chr2 27217307 27217517 + 19.0 0.000 promoter-TSS (NM_004341) promoter-TSS (NM_004341) 22 NM_001306079 790 Hs.377010 NM_004341 ENSG00000084774 CAD CDG1Z|EIEE50|GATD4 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase protein-coding chr16-356 chr16 66696672 66696882 + 19.0 0.000 promoter-TSS (NM_178818) promoter-TSS (NM_178818) -34 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr3-738 chr3 126389294 126389504 + 19.0 0.000 Intergenic CpG 5399 NR_103789 100506907 Hs.369473 NR_103787 ENSG00000249833 CCDC37-DT CCDC37-AS1 CCDC37 divergent transcript ncRNA chr15-383 chr15 69154728 69154938 + 19.0 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -5764 NM_001324091 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr8-1432 chr8 118634248 118634458 + 19.0 0.000 intron (NR_038210, intron 2 of 4) intron (NR_038210, intron 2 of 4) -12390 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr16-707 chr16 3150731 3150941 + 19.0 0.000 TTS (NR_132322) TTS (NR_132322) 6545 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chr7-1263 chr7 74890800 74891010 + 19.0 0.000 promoter-TSS (NR_040584) promoter-TSS (NR_040584) 137 NR_027776 5383 Hs.292996 NM_174930 PMS2P5 PMS2L5|PMS7 PMS1 homolog 2, mismatch repair system component pseudogene 5 pseudo chr22-492 chr22 26512309 26512519 + 19.0 0.000 promoter-TSS (NR_144529) promoter-TSS (NR_144529) 59 NM_012143 24144 Hs.20225 NM_012143 ENSG00000100109 TFIP11 NTR1|STIP|STIP-1|Spp382|TIP39|bK445C9.6 tuftelin interacting protein 11 protein-coding chr22-494 chr22 30044360 30044570 + 19.0 0.000 intron (NR_110541, intron 2 of 4) intron (NR_110541, intron 2 of 4) 35792 NR_110541 101929664 Hs.592197 NR_110541 HORMAD2-AS1 MTMR3-AS1 HORMAD2 and MTMR3 antisense RNA 1 ncRNA chr7-1046 chr7 105649928 105650138 + 19.0 0.000 intron (NM_001318229, intron 3 of 9) L3b|LINE|CR1 29122 NM_001318229 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr5-810 chr5 134289557 134289767 + 19.0 0.000 Intergenic Intergenic -63589 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr3-1754 chr3 179613838 179614048 + 19.0 0.000 intron (NM_001199957, intron 1 of 3) intron (NM_001199957, intron 1 of 3) 9149 NM_002492 4711 Hs.730674 NM_002492 ENSG00000136521 NDUFB5 CISGDH|SGDH NADH:ubiquinone oxidoreductase subunit B5 protein-coding chr4-384 chr4 1222591 1222801 + 19.0 0.000 intron (NM_001012614, intron 5 of 9) intron (NM_001012614, intron 5 of 9) 12576 NR_104331 285463 Hs.707614 NR_104331 ENSG00000280927 CTBP1-AS PCAT10 CTBP1 antisense RNA ncRNA chr4-482 chr4 75725123 75725333 + 19.0 0.000 intron (NM_003715, intron 1 of 23) CpG 706 NM_003715 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr8-985 chr8 120786013 120786223 + 19.0 0.000 intron (NM_021021, intron 1 of 6) L1PBa|LINE|L1 24865 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr21-121 chr21 45612286 45612496 + 19.0 0.000 Intergenic Intergenic 18737 NR_146912 105372840 Hs.406003 NR_146912 ENSG00000233922 LINC01694 - long intergenic non-protein coding RNA 1694 ncRNA chr10-1040 chr10 13718301 13718511 + 19.0 0.000 intron (NM_001318336, intron 11 of 23) intron (NM_001318336, intron 11 of 23) -10839 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr10-1034 chr10 123997483 123997693 + 19.0 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger 94818 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr11-759 chr11 46617013 46617223 + 19.0 0.000 promoter-TSS (NM_001205121) promoter-TSS (NM_001205121) 109 NM_173811 283254 Hs.714463 NM_173811 ENSG00000180423 HARBI1 C11orf77 harbinger transposase derived 1 protein-coding chrX-217 chrX 16743931 16744141 + 19.0 0.000 intron (NR_033181, intron 5 of 8) intron (NR_033181, intron 5 of 8) 24424 NR_033181 94056 Hs.744256 NM_032796 ENSG00000169895 SYAP1 BSTA|PRO3113 synapse associated protein 1 protein-coding chr16-917 chr16 87457773 87457983 + 19.0 0.000 intron (NM_015144, intron 2 of 12) intron (NM_015144, intron 2 of 12) 33976 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr18-236 chr18 74817683 74817893 + 19.0 0.000 intron (NM_017757, intron 3 of 7) intron (NM_017757, intron 3 of 7) 186825 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr12-1060 chr12 115096741 115096951 + 19.0 0.000 Intergenic Intergenic -412671 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr15-357 chr15 52528653 52528863 + 19.0 0.000 intron (NM_001142495, intron 1 of 39) CpG 122 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr6-648 chr6 9482152 9482362 + 19.0 0.000 Intergenic Intergenic 830048 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr11-1858 chr11 102802422 102802632 + 19.0 0.000 intron (NR_038390, intron 4 of 7) intron (NR_038390, intron 4 of 7) -4367 NM_002421 4312 Hs.83169 NM_002421 ENSG00000196611 MMP1 CLG|CLGN matrix metallopeptidase 1 protein-coding chr16-747 chr16 90022452 90022662 + 19.0 0.000 promoter-TSS (NM_001286208) promoter-TSS (NM_001286208) -43 NM_001286208 2622 Hs.431792 NM_001481 ENSG00000141013 GAS8 CILD33|DRC4|GAS11 growth arrest specific 8 protein-coding chr2-2256 chr2 237025301 237025511 + 19.0 0.000 Intergenic L2a|LINE|L2 30761 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr7-1554 chr7 24576305 24576515 + 19.0 0.000 intron (NM_001303037, intron 1 of 11) intron (NM_001303037, intron 1 of 11) 2958 NM_016447 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr1-775 chr1 248838761 248838971 + 19.0 0.000 intron (NM_024836, intron 1 of 3) CpG 642 NM_024836 79894 Hs.521151 NM_024836 ENSG00000171161 ZNF672 - zinc finger protein 672 protein-coding chr2-2031 chr2 117980781 117980991 + 19.0 0.000 intron (NM_019044, intron 7 of 23) L1MB7|LINE|L1 33184 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr2-897 chr2 110678026 110678236 + 19.0 0.000 promoter-TSS (NM_004336) promoter-TSS (NM_004336) -24 NM_001278617 699 Hs.469649 NM_004336 ENSG00000169679 BUB1 BUB1A|BUB1L|hBUB1 BUB1 mitotic checkpoint serine/threonine kinase protein-coding chr4-904 chr4 109980437 109980647 + 19.0 0.000 intron (NM_001357021, intron 13 of 19) intron (NM_001357021, intron 13 of 19) 67659 NM_001178131 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr7-599 chr7 100837312 100837522 + 19.0 0.000 non-coding (NR_146550, exon 2 of 2) non-coding (NR_146550, exon 2 of 2) -9894 NM_004444 2050 Hs.437008 NM_004444 ENSG00000196411 EPHB4 CMAVM2|HFASD|HTK|LMPHM7|MYK1|TYRO11 EPH receptor B4 protein-coding chr5-767 chr5 34791899 34792109 + 19.0 0.000 intron (NM_015577, intron 3 of 17) LTR33|LTR|ERVL -47160 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding chr7-422 chr7 76393045 76393255 + 19.0 0.000 intron (NM_080744, intron 9 of 10) CpG -4372 NM_007155 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr13-287 chr13 48303399 48303609 + 19.0 0.000 promoter-TSS (NM_000321) promoter-TSS (NM_000321) 198 NR_046414 100862704 Hs.374221 NR_046414 ENSG00000231473 RB1-DT LINC00441|ncRNA-RB1 RB1 divergent transcript ncRNA chr19-1062 chr19 36573793 36574003 + 19.0 0.000 promoter-TSS (NM_001321351) promoter-TSS (NM_001321351) -606 NM_001352273 57711 Hs.654960 NM_020951 ENSG00000186020 ZNF529 - zinc finger protein 529 protein-coding chr22-537 chr22 45125201 45125411 + 19.0 0.000 Intergenic Intergenic 27278 NR_038957 100506714 Hs.189902 NR_038956 NUP50-DT NUP50-AS1 NUP50 divergent transcript ncRNA chr4-873 chr4 139642478 139642688 + 19.0 0.000 Intergenic ERVL-E-int|LTR|ERVL -23185 NM_001204367 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr7-1465 chr7 100444866 100445076 + 19.0 0.000 Intergenic Intergenic -8474 NM_145030 221908 Hs.413359 NM_145030 ENSG00000160813 PPP1R35 C7orf47 protein phosphatase 1 regulatory subunit 35 protein-coding chr1-1949 chr1 55140530 55140740 + 19.0 0.000 intron (NM_015306, intron 24 of 67) intron (NM_015306, intron 24 of 67) 74729 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding chr14-312 chr14 75315255 75315465 + 19.0 0.000 Intergenic Intergenic 20956 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr5-1182 chr5 55668468 55668678 + 19.0 0.000 intron (NM_001349385, intron 7 of 14) intron (NM_001349385, intron 7 of 14) 24480 NM_001258287 153129 Hs.742101 NM_173514 ENSG00000177058 SLC38A9 URLC11 solute carrier family 38 member 9 protein-coding chr9-473 chr9 129110814 129111024 + 19.0 0.000 promoter-TSS (NM_001271832) promoter-TSS (NM_001271832) -31 NM_021131 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr16-1805 chr16 19607622 19607832 + 19.0 0.000 intron (NM_001300743, intron 9 of 27) intron (NM_001300743, intron 9 of 27) 52024 NM_001365295 57020 Hs.654964 NM_020314 ENSG00000103544 VPS35L C16orf62 VPS35 endosomal protein sorting factor like protein-coding chr5-729 chr5 144048261 144048471 + 19.0 0.000 Intergenic L1PA8|LINE|L1 122293 NM_001271732 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding chr14-1084 chr14 35553883 35554093 + 19.0 0.000 intron (NM_014990, intron 38 of 40) intron (NM_014990, intron 38 of 40) 19824 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding chr1-3380 chr1 180530591 180530801 + 19.0 0.000 Intergenic Intergenic -28119 NM_032360 84320 Hs.200051 NM_032360 ENSG00000230124 ACBD6 - acyl-CoA binding domain containing 6 protein-coding chr3-737 chr3 126014363 126014573 + 19.0 0.000 intron (NM_001164475, intron 7 of 9) MER102b|DNA|hAT-Charlie 42307 NM_001008487 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chr12-800 chr12 1553164 1553374 + 19.0 0.000 Intergenic MER103C|DNA|hAT-Charlie -21077 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr13-674 chr13 112733774 112733984 + 19.0 0.000 intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 20852 NR_046661 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr9-1315 chr9 134486222 134486432 + 19.0 0.000 Intergenic Intergenic 79767 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr11-1216 chr11 12076389 12076599 + 19.0 0.000 Intergenic Intergenic -34082 NM_001282668 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr20-902 chr20 46071821 46072031 + 19.0 0.000 intron (NM_001348148, intron 1 of 6) intron (NM_001348148, intron 1 of 6) 18036 NM_001348151 57727 Hs.654991 NM_020967 ENSG00000124160 NCOA5 CIA|bA465L10.6 nuclear receptor coactivator 5 protein-coding chr16-1478 chr16 1357082 1357292 + 19.0 0.000 intron (NM_032520, intron 3 of 10) intron (NM_032520, intron 3 of 10) 5256 NM_032520 84572 Hs.241575 NM_032520 ENSG00000090581 GNPTG C16orf27|GNPTAG|LP2537|RJD9 N-acetylglucosamine-1-phosphate transferase subunit gamma protein-coding chr1-2094 chr1 102919834 102920044 + 19.0 0.000 intron (NM_001854, intron 49 of 66) intron (NM_001854, intron 49 of 66) 188557 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr11-911 chr11 73325142 73325352 + 19.0 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -15886 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr4-563 chr4 119299470 119299680 + 19.0 0.000 intron (NM_001001701, intron 1 of 1) intron (NM_001001701, intron 1 of 1) 1070 NM_001001701 401152 Hs.173705 NM_001001701 ENSG00000164096 C4orf3 ALN|HCVFTP1 chromosome 4 open reading frame 3 protein-coding chr5-1125 chr5 67161040 67161250 + 19.0 0.000 intron (NM_001297651, intron 24 of 25) intron (NM_001297651, intron 24 of 25) 35654 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr5-1139 chr5 131546107 131546317 + 19.0 0.000 intron (NM_016340, intron 6 of 27) intron (NM_016340, intron 6 of 27) 89017 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr1-597 chr1 32133464 32133674 + 19.0 0.000 intron (NM_012316, intron 1 of 13) AluJo|SINE|Alu 25513 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr6-1310 chr6 3797775 3797985 + 19.0 0.000 Intergenic Intergenic -45868 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr5-1013 chr5 102664490 102664700 + 19.0 0.000 intron (NR_103753, intron 1 of 2) intron (NR_103753, intron 1 of 2) 6869 NR_103756 285708 Hs.533011 NR_103753 LINC00491 - long intergenic non-protein coding RNA 491 ncRNA chr7-800 chr7 76130629 76130839 + 19.0 0.000 Intergenic Intergenic -21972 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr1-1672 chr1 44819744 44819954 + 19.0 0.000 TTS (NM_001166292) TTS (NM_001166292) 11367 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB domain containing 19 protein-coding chr21-128 chr21 44871891 44872101 + 19.0 0.000 intron (NM_001286822, intron 1 of 2) intron (NM_001286822, intron 1 of 2) 1694 NM_004339 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF PTTG1 interacting protein protein-coding chr8-674 chr8 80030267 80030477 + 19.0 0.000 promoter-TSS (NM_014018) promoter-TSS (NM_014018) -113 NM_014018 28957 Hs.521124 NM_014018 ENSG00000147586 MRPS28 HSPC007|MRP-S28|MRP-S35|MRPS35 mitochondrial ribosomal protein S28 protein-coding chr10-862 chr10 125691965 125692175 + 19.0 0.000 intron (NR_033848, intron 2 of 4) intron (NR_033848, intron 2 of 4) 8827 NR_033848 283038 Hs.144911 NR_033848 ENSG00000228021 LOC283038 - uncharacterized LOC283038 ncRNA chr14-494 chr14 100440296 100440506 + 19.0 0.000 intron (NM_001350949, intron 2 of 6) intron (NM_001350949, intron 2 of 6) 63916 NM_024515 79446 Hs.497599 NM_024515 ENSG00000176473 WDR25 C14orf67 WD repeat domain 25 protein-coding chr1-2293 chr1 20426989 20427199 + 19.0 0.000 intron (NR_033887, intron 1 of 11) intron (NR_033887, intron 1 of 11) 1700 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr4-522 chr4 4801062 4801272 + 19.0 0.000 Intergenic Intergenic 39407 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr12-1069 chr12 132521966 132522176 + 19.0 0.000 intron (NM_001142641, intron 2 of 16) intron (NM_001142641, intron 2 of 16) 31920 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr8-246 chr8 68330683 68330893 + 19.0 0.000 promoter-TSS (NM_052958) promoter-TSS (NM_052958) -167 NM_052958 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr15-772 chr15 99511478 99511688 + 19.0 0.000 Intergenic Intergenic -53834 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr1-2150 chr1 9755720 9755930 + 19.0 0.000 intron (NM_014944, intron 2 of 17) intron (NM_014944, intron 2 of 17) 64358 NM_001350235 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr1-1518 chr1 36374697 36374907 + 19.0 0.000 intron (NM_032017, intron 1 of 11) intron (NM_032017, intron 1 of 11) 11122 NM_032017 83931 Hs.471768 NM_032017 ENSG00000196182 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding chr13-212 chr13 31067849 31068059 + 19.0 0.000 Intergenic Intergenic 93950 NM_006644 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr11-1407 chr11 19789834 19790044 + 19.0 0.000 intron (NM_182964, intron 1 of 37) intron (NM_182964, intron 1 of 37) -29856 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr4-727 chr4 184343759 184343969 + 19.0 0.000 intron (NR_040108, intron 2 of 2) LTR33A|LTR|ERVL 10113 NR_040108 728175 Hs.590107 NR_040108 ENSG00000180712 LINC02363 - long intergenic non-protein coding RNA 2363 ncRNA chr1-457 chr1 1777966 1778176 + 19.0 0.000 intron (NM_001353641, intron 1 of 11) CpG 399 NM_023018 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr3-1469 chr3 63986194 63986404 + 19.0 0.000 intron (NM_001177387, intron 7 of 12) L2b|LINE|L2 -17723 NR_038286 100507062 Hs.152536 NR_038286 ENSG00000239653 PSMD6-AS2 - PSMD6 antisense RNA 2 ncRNA chr11-798 chr11 94201097 94201307 + 19.0 0.000 Intergenic L2c|LINE|L2 72361 NM_015368 24145 Hs.591976 NM_015368 ENSG00000110218 PANX1 MRS1|PX1|UNQ2529 pannexin 1 protein-coding chr12-1260 chr12 50934846 50935056 + 19.0 0.000 Intergenic Intergenic 9936 NM_014033 25840 Hs.711113 NM_014033 ENSG00000185432 METTL7A AAM-B|AAMB methyltransferase like 7A protein-coding chr21-230 chr21 32569425 32569635 + 19.0 0.000 intron (NR_146639, intron 10 of 11) CpG 15993 NM_144659 140290 Hs.728804 NM_018277 ENSG00000242220 TCP10L C21orf77|PRED77|TCP10A-1|TCP10A-2 t-complex 10 like protein-coding chr3-804 chr3 16103601 16103811 + 19.0 0.000 Intergenic Intergenic -70974 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr19-818 chr19 57727628 57727838 + 19.0 0.000 promoter-TSS (NM_001321376) promoter-TSS (NM_001321376) -109 NM_024833 79891 Hs.180402 NM_024833 ENSG00000083814 ZNF671 - zinc finger protein 671 protein-coding chr19-750 chr19 56120404 56120614 + 19.0 0.000 intron (NM_001002836, intron 1 of 2) CpG 786 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr7-1551 chr7 7885727 7885937 + 19.0 0.000 Intergenic AluSx|SINE|Alu 82920 NR_110018 100505921 Hs.634989 NR_110018 LOC100505921 - uncharacterized LOC100505921 ncRNA chr2-1054 chr2 173184385 173184595 + 19.0 0.000 intron (NM_133646, intron 4 of 11) intron (NM_133646, intron 4 of 11) 97546 NR_033882 339751 Hs.570083 NR_033882 ENSG00000238133 MAP3K20-AS1 MLK7-AS1 MAP3K20 antisense RNA 1 ncRNA chr3-1512 chr3 143786542 143786752 + 19.0 0.000 intron (NM_173653, intron 4 of 15) intron (NM_173653, intron 4 of 15) 61821 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr6-943 chr6 146851861 146852071 + 19.0 0.000 intron (NR_034115, intron 8 of 10) intron (NR_034115, intron 8 of 10) -48142 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr20-314 chr20 63836524 63836734 + 19.0 0.000 Intergenic Intergenic -5365 NM_001369741 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr11-1249 chr11 93396531 93396741 + 19.0 0.000 intron (NM_181645, intron 11 of 13) L2c|LINE|L2 65919 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr18-523 chr18 59228405 59228615 + 19.0 0.000 intron (NM_001012512, intron 2 of 2) intron (NM_001012512, intron 2 of 2) 8352 NM_002091 2922 Hs.153444 NM_002091 ENSG00000134443 GRP BN|GRP-10|preproGRP|proGRP gastrin releasing peptide protein-coding chr2-1331 chr2 109351255 109351465 + 19.0 0.000 intron (NM_001099289, intron 2 of 9) intron (NM_001099289, intron 2 of 9) -37735 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr1-1488 chr1 202589084 202589294 + 19.0 0.000 TTS (NM_001197131) TTS (NM_001197131) 49075 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr19-970 chr19 55634794 55635004 + 19.0 0.000 Intergenic Intergenic -6103 NM_207115 51157 Hs.631551 NM_016202 ENSG00000213015 ZNF580 - zinc finger protein 580 protein-coding chr4-1020 chr4 7546833 7547043 + 19.0 0.000 intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) 86910 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr2-783 chr2 108719263 108719473 + 19.0 0.000 promoter-TSS (NM_006267) promoter-TSS (NM_006267) -114 NM_006267 5903 Hs.199561 NM_006267 ENSG00000153201 RANBP2 ADANE|ANE1|IIAE3|NUP358|TRP1|TRP2 RAN binding protein 2 protein-coding chr8-479 chr8 94895765 94895975 + 19.0 0.000 promoter-TSS (NR_148904) promoter-TSS (NR_148904) 71 NR_148904 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr2-1461 chr2 33215252 33215462 + 19.0 0.000 intron (NM_206943, intron 7 of 33) MIR|SINE|MIR 80760 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr1-2465 chr1 78419285 78419495 + 19.0 0.000 Intergenic Intergenic -71584 NM_001039585 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr12-635 chr12 68451251 68451461 + 19.0 0.000 intron (NR_120458, intron 1 of 3) intron (NR_120458, intron 1 of 3) 128 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr6-302 chr6 57089970 57090180 + 19.0 0.000 promoter-TSS (NM_001031623) promoter-TSS (NM_001031623) 45 NM_015555 26036 Hs.485628 NM_015555 ENSG00000112200 ZNF451 COASTER|dJ417I1.1 zinc finger protein 451 protein-coding chr4-878 chr4 167903453 167903663 + 19.0 0.000 Intergenic Intergenic -188979 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chrX-331 chrX 77505295 77505505 + 19.0 0.000 3' UTR (NM_138270, exon 34 of 34) 3' UTR (NM_138270, exon 34 of 34) 58011 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr4-414 chr4 56301522 56301732 + 19.0 0.000 intron (NM_020722, intron 4 of 10) intron (NM_020722, intron 4 of 10) 85864 NM_001286668 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr18-179 chr18 8122077 8122287 + 19.0 0.000 intron (NM_002845, intron 13 of 30) intron (NM_002845, intron 13 of 30) 244852 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr3-1620 chr3 41268184 41268394 + 19.0 0.000 intron (NR_136342, intron 33 of 34) intron (NR_136342, intron 33 of 34) 68784 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr2-1873 chr2 37802924 37803134 + 19.0 0.000 Intergenic Intergenic 26682 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr21-147 chr21 37199454 37199664 + 19.0 0.000 intron (NM_003316, intron 44 of 45) intron (NM_003316, intron 44 of 45) -5633 NR_046651 100874006 Hs.570411 NR_046651 ENSG00000228677 TTC3-AS1 - TTC3 antisense RNA 1 ncRNA chr5-916 chr5 110321145 110321355 + 19.0 0.000 Intergenic Intergenic 192665 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr10-1291 chr10 33216872 33217082 + 19.0 0.000 intron (NM_001244973, intron 8 of 16) intron (NM_001244973, intron 8 of 16) -100170 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr22-425 chr22 37817744 37817954 + 19.0 0.000 TTS (NM_001171690) TTS (NM_001171690) -5533 NM_003614 8484 Hs.158353 NM_003614 ENSG00000128310 GALR3 - galanin receptor 3 protein-coding chr15-615 chr15 38302625 38302835 + 19.0 0.000 intron (NM_152594, intron 2 of 6) intron (NM_152594, intron 2 of 6) 49894 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr1-3484 chr1 66271400 66271610 + 19.0 0.000 intron (NM_001037340, intron 5 of 14) intron (NM_001037340, intron 5 of 14) -60603 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr10-546 chr10 29895588 29895798 + 19.0 0.000 Intergenic Intergenic -158757 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr1-2612 chr1 86207432 86207642 + 19.0 0.000 Intergenic Intergenic -50553 NR_146340 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr17-930 chr17 72120874 72121084 + 19.0 0.000 promoter-TSS (NR_103737) promoter-TSS (NR_103737) -41 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box transcription factor 9 protein-coding chr1-1011 chr1 117366871 117367081 + 19.0 0.000 promoter-TSS (NM_006699) promoter-TSS (NM_006699) -473 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr9-943 chr9 124721354 124721564 + 19.0 0.000 intron (NM_033334, intron 2 of 9) intron (NM_033334, intron 2 of 9) 27749 NR_029782 406956 NR_029782 ENSG00000207737 MIR181B2 MIRN181B2|mir-181b-2 microRNA 181b-2 ncRNA chr1-1784 chr1 37999889 38000099 + 19.0 0.000 intron (NM_004468, intron 1 of 5) intron (NM_004468, intron 1 of 5) 5520 NM_001243878 2275 Hs.57687 NM_004468 ENSG00000183386 FHL3 SLIM2 four and a half LIM domains 3 protein-coding chr22-370 chr22 40818950 40819160 + 19.0 0.000 intron (NR_104235, intron 1 of 10) intron (NR_104235, intron 1 of 10) 291 NM_006358 10478 Hs.474938 NM_006358 ENSG00000100372 SLC25A17 PMP34 solute carrier family 25 member 17 protein-coding chr3-774 chr3 4979190 4979400 + 19.0 0.000 promoter-TSS (NM_003670) promoter-TSS (NM_003670) -142 NM_003670 8553 Hs.744856 NM_003670 ENSG00000134107 BHLHE40 BHLHB2|Clast5|DEC1|HLHB2|SHARP-2|SHARP2|STRA13|Stra14 basic helix-loop-helix family member e40 protein-coding chr1-1744 chr1 178341264 178341474 + 19.0 0.000 promoter-TSS (NM_004841) promoter-TSS (NM_004841) -82 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr22-318 chr22 38114602 38114812 + 19.0 0.000 intron (NM_001199562, intron 13 of 15) intron (NM_001199562, intron 13 of 15) -4023 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr11-1519 chr11 107898355 107898565 + 19.0 0.000 Intergenic Intergenic -29988 NM_017516 54734 Hs.354906 NM_017516 ENSG00000179331 RAB39A RAB39 RAB39A, member RAS oncogene family protein-coding chr4-856 chr4 76435751 76435961 + 19.0 0.000 5' UTR (NM_020859, exon 1 of 11) 5' UTR (NM_020859, exon 1 of 11) 627 NM_020859 57619 Hs.683808 NM_020859 ENSG00000138771 SHROOM3 APXL3|MSTP013|SHRM|ShrmL shroom family member 3 protein-coding chr10-1761 chr10 30701395 30701605 + 19.0 0.000 intron (NR_036438, intron 5 of 9) MER5B|DNA|hAT-Charlie 9226 NR_036438 645954 Hs.408581 NR_036438 SVIL2P SVILP1 supervillin family member 2, pseudogene pseudo chr9-550 chr9 109780012 109780222 + 19.0 0.000 promoter-TSS (NM_007203) promoter-TSS (NM_007203) -81 NM_007203 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr3-819 chr3 115239793 115240003 + 19.0 0.000 Intergenic Intergenic -92610 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr10-646 chr10 30285112 30285322 + 19.0 0.000 Intergenic Intergenic 64121 NM_018109 55149 Hs.173946 NM_018109 ENSG00000107951 MTPAP PAPD1|SPAX4|TENT6 mitochondrial poly(A) polymerase protein-coding chr18-407 chr18 31942167 31942377 + 19.0 0.000 intron (NM_014939, intron 1 of 28) intron (NM_014939, intron 1 of 28) 856 NM_014939 22878 Hs.202001 NM_014939 ENSG00000153339 TRAPPC8 GSG1|HsT2706|KIAA1012|TRS85 trafficking protein particle complex 8 protein-coding chr6-1339 chr6 35391212 35391422 + 19.0 0.000 intron (NM_001171819, intron 2 of 6) L1MC4|LINE|L1 48759 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr9-1296 chr9 91906213 91906423 + 19.0 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 43910 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr4-687 chr4 184383446 184383656 + 19.0 0.000 Intergenic Intergenic -1245 NR_125933 102723766 Hs.432281 NR_125933 ENSG00000249096 LINC02362 - long intergenic non-protein coding RNA 2362 ncRNA chr2-1169 chr2 216657580 216657790 + 19.0 0.000 intron (NM_000597, intron 1 of 3) intron (NM_000597, intron 1 of 3) -1882 NM_001313990 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr5-606 chr5 43079011 43079221 + 19.0 0.000 intron (NR_102752, intron 2 of 2) LTR23|LTR|ERV1 -11677 NR_104651 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA chr19-1394 chr19 16823113 16823323 + 19.0 0.000 Intergenic Intergenic -6180 NM_015260 23309 Hs.13999 NM_015260 ENSG00000127511 SIN3B - SIN3 transcription regulator family member B protein-coding chr2-1391 chr2 55885761 55885971 + 19.0 0.000 intron (NM_001039349, intron 4 of 10) intron (NM_001039349, intron 4 of 10) 37916 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chr3-687 chr3 29280883 29281093 + 18.9 0.000 promoter-TSS (NM_014483) promoter-TSS (NM_014483) -49 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr2-2074 chr2 216057695 216057905 + 18.9 0.000 intron (NM_018441, intron 4 of 7) intron (NM_018441, intron 4 of 7) 24009 NM_018441 55825 Hs.281680 NM_018441 ENSG00000115425 PECR DCRRP|HPDHASE|HSA250303|PVIARL|SDR29C1|TERP peroxisomal trans-2-enoyl-CoA reductase protein-coding chrX-219 chrX 24693655 24693865 + 18.9 0.000 promoter-TSS (NM_001330360) promoter-TSS (NM_001330360) -158 NM_016937 5422 Hs.567319 NM_016937 ENSG00000101868 POLA1 NSX|POLA|p180 DNA polymerase alpha 1, catalytic subunit protein-coding chr12-673 chr12 6924382 6924592 + 18.9 0.000 promoter-TSS (NM_001007026) promoter-TSS (NM_001007026) 28 NM_001007026 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr2-1477 chr2 98568268 98568478 + 18.9 0.000 intron (NM_001351428, intron 21 of 24) intron (NM_001351428, intron 21 of 24) 40139 NM_001008215 493753 Hs.596537 NM_001008215 ENSG00000183513 COA5 6330578E17Rik|C2orf64|CEMCOX3|Pet191 cytochrome c oxidase assembly factor 5 protein-coding chr11-1077 chr11 86888670 86888880 + 18.9 0.000 intron (NR_120592, intron 2 of 2) intron (NR_120592, intron 2 of 2) -30821 NR_045004 8587 Hs.741959 NR_045004 ENSG00000255203 OR7E2P OR11-6|OR7E143P|OR7E51P|OR7E52P|OR7F2P|OST245|hg94 olfactory receptor family 7 subfamily E member 2 pseudogene pseudo chr7-1503 chr7 154928347 154928557 + 18.9 0.000 promoter-TSS (NR_024477) promoter-TSS (NR_024477) -65 NR_024476 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr2-3652 chr2 159262335 159262545 + 18.9 0.000 intron (NM_001330280, intron 4 of 9) intron (NM_001330280, intron 4 of 9) 24263 NM_001330278 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr12-1394 chr12 108133978 108134188 + 18.9 0.000 intron (NM_001304447, intron 1 of 9) intron (NM_001304447, intron 1 of 9) 2297 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr19-1018 chr19 42256059 42256269 + 18.9 0.000 Intergenic Intergenic -1036 NM_001312656 2077 Hs.655969 NM_006494 ENSG00000105722 ERF CHYTS|CRS4|PE-2|PE2 ETS2 repressor factor protein-coding chr10-964 chr10 69065741 69065951 + 18.9 0.000 Intergenic Intergenic -21757 NM_001321053 5552 Hs.1908 NM_002727 ENSG00000122862 SRGN PPG|PRG|PRG1 serglycin protein-coding chr22-292 chr22 46542349 46542559 + 18.9 0.000 Intergenic Intergenic -4834 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr2-1030 chr2 32357652 32357862 + 18.9 0.000 intron (NM_016252, intron 1 of 73) CpG 729 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr13-484 chr13 96898363 96898573 + 18.9 0.000 Intergenic Intergenic 85704 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr8-693 chr8 140718513 140718723 + 18.9 0.000 promoter-TSS (NM_001352752) promoter-TSS (NM_001352752) -49 NM_001352752 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr9-1062 chr9 96501440 96501650 + 18.9 0.000 non-coding (NR_147239, exon 15 of 15) non-coding (NR_147239, exon 15 of 15) 51376 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr11-1094 chr11 17209258 17209468 + 18.9 0.000 Intergenic Intergenic -1377 NM_002645 5286 Hs.175343 NM_002645 ENSG00000011405 PIK3C2A CPK|OCSKD|PI3-K-C2(ALPHA)|PI3-K-C2A|PI3K-C2-alpha|PI3K-C2alpha phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding chr6-450 chr6 69894609 69894819 + 18.9 0.000 intron (NM_001858, intron 2 of 50) MER61-int|LTR|ERV1 28158 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr17-1769 chr17 32910003 32910213 + 18.9 0.000 Intergenic Intergenic -17802 NM_001033504 26022 Hs.3447 NM_015544 ENSG00000006042 TMEM98 TADA1 transmembrane protein 98 protein-coding chr3-503 chr3 52197964 52198174 + 18.9 0.000 promoter-TSS (NM_000688) promoter-TSS (NM_000688) -14 NM_199166 211 Hs.476308 NM_000688 ENSG00000023330 ALAS1 ALAS|ALAS-H|ALAS3|ALASH|MIG4 5'-aminolevulinate synthase 1 protein-coding chr6-1026 chr6 129490527 129490737 + 18.9 0.000 intron (NM_000426, intron 56 of 64) intron (NM_000426, intron 56 of 64) 219545 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr19-1609 chr19 39480552 39480762 + 18.9 0.000 promoter-TSS (NM_001329559) promoter-TSS (NM_001329559) -181 NM_001001563 92609 Hs.590956 NM_001001563 ENSG00000105197 TIMM50 MGCA9|TIM50|TIM50L translocase of inner mitochondrial membrane 50 protein-coding chr3-415 chr3 14415374 14415584 + 18.9 0.000 intron (NR_103507, intron 1 of 13) intron (NR_103507, intron 1 of 13) 12873 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr17-1725 chr17 75363291 75363501 + 18.9 0.000 intron (NM_002086, intron 2 of 5) intron (NM_002086, intron 2 of 5) 42282 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr5-1131 chr5 79021066 79021276 + 18.9 0.000 non-coding (NR_104003, exon 10 of 10) non-coding (NR_104003, exon 10 of 10) -35213 NM_198709 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr19-1316 chr19 41321664 41321874 + 18.9 0.000 intron (NM_001346100, intron 4 of 4) L2a|LINE|L2 11292 NM_001346100 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr8-1030 chr8 29055156 29055366 + 18.9 0.000 Intergenic Intergenic 163947 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr3-1157 chr3 100525869 100526079 + 18.9 0.000 intron (NM_001363876, intron 2 of 6) intron (NM_001363876, intron 2 of 6) 33355 NM_018004 55076 Hs.658956 NM_018004 ENSG00000181458 TMEM45A DERP7|DNAPTP4 transmembrane protein 45A protein-coding chr4-334 chr4 124712468 124712678 + 18.9 0.000 5' UTR (NM_020337, exon 1 of 5) 5' UTR (NM_020337, exon 1 of 5) 159 NM_001167882 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr2-2526 chr2 189350596 189350806 + 18.9 0.000 Intergenic Intergenic -90732 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr8-1359 chr8 118088702 118088912 + 18.9 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 23012 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr2-1350 chr2 219495457 219495667 + 18.9 0.000 promoter-TSS (NM_001286811) promoter-TSS (NM_001286811) -793 NM_001286811 100996693 Hs.21639 NM_001286811 ENSG00000286095 SPEGNB - SPEG neighbor protein-coding chr11-728 chr11 71452919 71453129 + 18.9 0.000 promoter-TSS (NM_018161) promoter-TSS (NM_018161) -179 NM_018161 55191 Hs.556986 NM_018161 ENSG00000172890 NADSYN1 - NAD synthetase 1 protein-coding chr21-193 chr21 14403840 14404050 + 18.9 0.000 Intergenic Intergenic -20799 NM_006948 6782 Hs.352341 NM_006948 ENSG00000155304 HSPA13 STCH heat shock protein family A (Hsp70) member 13 protein-coding chr7-919 chr7 152055030 152055240 + 18.9 0.000 intron (NM_001371468, intron 2 of 12) MLT1B|LTR|ERVL-MaLR -19902 NM_001371474 chr5-889 chr5 132475082 132475292 + 18.9 0.000 intron (NR_161242, intron 3 of 3) intron (NR_161242, intron 3 of 3) 15586 NR_149068 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr2-1588 chr2 96022789 96022999 + 18.9 0.000 non-coding (NR_003698, exon 4 of 4) non-coding (NR_003698, exon 4 of 4) 12343 NR_003698 729234 Hs.720108 NR_003698 ENSG00000231584 FAHD2CP - fumarylacetoacetate hydrolase domain containing 2C, pseudogene pseudo chr1-1691 chr1 197736834 197737044 + 18.9 0.000 intron (NM_001195216, intron 2 of 2) intron (NM_001195216, intron 2 of 2) 38541 NM_001300858 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr1-854 chr1 23980313 23980523 + 18.9 0.000 promoter-TSS (NR_034035) promoter-TSS (NR_034035) 45 NR_034035 10772 Hs.3530 NM_006625 ENSG00000188529 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine and arginine rich splicing factor 10 protein-coding chr9-1053 chr9 37079497 37079707 + 18.9 0.000 promoter-TSS (NR_036592) promoter-TSS (NR_036592) -294 NR_036592 100506710 Hs.446271 NR_036592 ENSG00000281649 EBLN3P EBLN3 endogenous Bornavirus like nucleoprotein 3, pseudogene pseudo chr6-716 chr6 105601558 105601768 + 18.9 0.000 Intergenic Intergenic -198581 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr7-1191 chr7 46133161 46133371 + 18.9 0.000 Intergenic Intergenic -211994 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr13-285 chr13 43664956 43665166 + 18.9 0.000 intron (NM_001347964, intron 2 of 17) intron (NM_001347964, intron 2 of 17) -35584 NM_001127615 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr9-841 chr9 134526584 134526794 + 18.9 0.000 Intergenic L1MB4|LINE|L1 -115116 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chrX-150 chrX 3712286 3712496 + 18.9 0.000 intron (NM_005044, intron 1 of 8) CpG 1258 NM_005044 5613 Hs.390788 NM_005044 ENSG00000183943 PRKX PKX1 protein kinase X-linked protein-coding chr11-1103 chr11 70180737 70180947 + 18.9 0.000 intron (NM_018043, intron 23 of 25) intron (NM_018043, intron 23 of 25) -22321 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr7-1291 chr7 5811834 5812044 + 18.9 0.000 Intergenic Intergenic -11221 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr12-2301 chr12 120503759 120503969 + 18.9 0.000 exon (NM_032314, exon 7 of 7) exon (NM_032314, exon 7 of 7) 7751 NM_001037495 8655 Hs.5120 NM_003746 ENSG00000088986 DYNLL1 DLC1|DLC8|DNCL1|DNCLC1|LC8|LC8a|PIN|hdlc1 dynein light chain LC8-type 1 protein-coding chr1-1346 chr1 9943016 9943226 + 18.9 0.000 promoter-TSS (NM_022787) promoter-TSS (NM_022787) 198 NM_001297778 64802 Hs.633762 NM_022787 ENSG00000173614 NMNAT1 LCA9|NMNAT|PNAT1 nicotinamide nucleotide adenylyltransferase 1 protein-coding chr21-252 chr21 44331891 44332101 + 18.9 0.000 exon (NM_004928, exon 5 of 7) exon (NM_004928, exon 5 of 7) 6342 NM_001271442 755 Hs.517331 NM_004928 ENSG00000160226 CFAP410 C21orf2|LRRC76|RDMS|SMDAX|YF5/A2 cilia and flagella associated protein 410 protein-coding chr17-616 chr17 80834174 80834384 + 18.9 0.000 intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -28647 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr3-731 chr3 71195487 71195697 + 18.9 0.000 intron (NR_146142, intron 6 of 19) intron (NR_146142, intron 6 of 19) 49485 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr13-349 chr13 109145626 109145836 + 18.9 0.000 intron (NM_015011, intron 32 of 34) intron (NM_015011, intron 32 of 34) 21572 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr17-735 chr17 68705192 68705402 + 18.9 0.000 Intergenic Intergenic 77143 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr18-49 chr18 8704922 8705132 + 18.9 0.000 intron (NR_120598, intron 1 of 1) CpG 2594 NR_120598 100287082 Hs.439434 NR_120598 ENSG00000265962 GACAT2 MTCL1-AS1|MTCL1AS1 gastric cancer associated transcript 2 ncRNA chr6-162 chr6 37169811 37170021 + 18.9 0.000 promoter-TSS (NM_002648) promoter-TSS (NM_002648) -236 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr19-858 chr19 9309841 9310051 + 18.9 0.000 promoter-TSS (NM_198535) promoter-TSS (NM_198535) -108 NM_198535 374879 Hs.633842 NM_198535 ENSG00000196110 ZNF699 hang zinc finger protein 699 protein-coding chr9-1180 chr9 91803392 91803602 + 18.9 0.000 intron (NM_001318204, intron 1 of 7) L1MB2|LINE|L1 146731 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr18-153 chr18 46072126 46072336 + 18.9 0.000 promoter-TSS (NM_024430) promoter-TSS (NM_024430) 29 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chrX-121 chrX 107628288 107628498 + 18.9 0.000 promoter-TSS (NM_001204402) promoter-TSS (NM_001204402) -31 NM_002764 5631 Hs.56 NM_002764 ENSG00000147224 PRPS1 ARTS|CMTX5|DFN2|DFNX1|PPRibP|PRS-I|PRSI phosphoribosyl pyrophosphate synthetase 1 protein-coding chr1-866 chr1 159891618 159891828 + 18.9 0.000 intron (NM_012337, intron 2 of 11) intron (NM_012337, intron 2 of 11) 8356 NR_130464 100422852 NR_130464 ENSG00000266458 MIR4259 - microRNA 4259 ncRNA chr2-662 chr2 96760659 96760869 + 18.9 0.000 promoter-TSS (NM_020184) promoter-TSS (NM_020184) -138 NM_020184 26504 Hs.175043 NM_020184 ENSG00000158158 CNNM4 ACDP4 cyclin and CBS domain divalent metal cation transport mediator 4 protein-coding chr6-713 chr6 85464277 85464487 + 18.9 0.000 intron (NM_002526, intron 1 of 8) intron (NM_002526, intron 1 of 8) 14299 NM_002526 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr10-871 chr10 12849618 12849828 + 18.9 0.000 Intergenic Intergenic -124370 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr8-1127 chr8 116685390 116685600 + 18.9 0.000 intron (NM_003756, intron 2 of 7) intron (NM_003756, intron 2 of 7) 33395 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr3-1097 chr3 15983082 15983292 + 18.9 0.000 Intergenic Intergenic 109416 NR_030289 693148 NR_030289 ENSG00000207815 MIR563 MIRN563|hsa-mir-563 microRNA 563 ncRNA chr18-326 chr18 13630082 13630292 + 18.9 0.000 intron (NM_001003675, intron 2 of 2) intron (NM_001003675, intron 2 of 2) -11571 NM_001276251 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr19-778 chr19 38315888 38316098 + 18.9 0.000 promoter-TSS (NM_001039673) promoter-TSS (NM_001039673) -46 NM_001039672 90522 Hs.280741 NM_033557 ENSG00000167645 YIF1B FinGER8 Yip1 interacting factor homolog B, membrane trafficking protein protein-coding chr8-1114 chr8 94357781 94357991 + 18.9 0.000 Intergenic Intergenic 79058 NM_001256141 100861412 Hs.30561 NM_001256141 ENSG00000265817 FSBP - fibrinogen silencer binding protein protein-coding chr6-1381 chr6 97215156 97215366 + 18.9 0.000 intron (NM_001350600, intron 13 of 23) intron (NM_001350600, intron 13 of 23) 67955 NM_001350599 253714 Hs.444292 NM_198468 ENSG00000146263 MMS22L C6orf167|dJ39B17.2 MMS22 like, DNA repair protein protein-coding chr3-1259 chr3 177360042 177360252 + 18.9 0.000 Intergenic Intergenic 65705 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr4-1216 chr4 137559080 137559290 + 18.9 0.000 intron (NR_146553, intron 1 of 1) intron (NR_146553, intron 1 of 1) 13454 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr13-643 chr13 24032387 24032597 + 18.9 0.000 intron (NM_001286792, intron 3 of 14) intron (NM_001286792, intron 3 of 14) 52690 NR_104595 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr2-1693 chr2 160307160 160307370 + 18.9 0.000 intron (NM_002897, intron 4 of 13) intron (NM_002897, intron 4 of 13) -35370 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chr22-288 chr22 45671788 45671998 + 18.9 0.000 promoter-TSS (NM_001167621) promoter-TSS (NM_001167621) 59 NM_013236 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr7-771 chr7 47651713 47651923 + 18.9 0.000 Intergenic Intergenic -3426 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr18-352 chr18 9380612 9380822 + 18.9 0.000 intron (NM_020648, intron 3 of 4) L4_A_Mam|LINE|RTE-X 45944 NM_020648 57045 Hs.514685 NM_020648 ENSG00000128791 TWSG1 TSG twisted gastrulation BMP signaling modulator 1 protein-coding chr14-147 chr14 21071581 21071791 + 18.9 0.000 promoter-TSS (NM_001282211) promoter-TSS (NM_001282211) -814 NM_001282211 57447 Hs.525205 NM_016250 ENSG00000165795 NDRG2 SYLD NDRG family member 2 protein-coding chr12-1352 chr12 15337244 15337454 + 18.9 0.000 intron (NM_030667, intron 1 of 26) MER94|DNA|hAT-Blackjack 14841 NM_030667 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr1-1818 chr1 217562710 217562920 + 18.9 0.000 intron (NM_018040, intron 5 of 9) MIRb|SINE|MIR 68275 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr3-920 chr3 42653548 42653758 + 18.9 0.000 promoter-TSS (NM_145166) promoter-TSS (NM_145166) -44 NM_145166 92999 Hs.409561 NM_145166 ENSG00000114853 ZBTB47 ZNF651 zinc finger and BTB domain containing 47 protein-coding chr16-996 chr16 4087508 4087718 + 18.9 0.000 intron (NM_001116, intron 2 of 10) intron (NM_001116, intron 2 of 10) 28829 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr12-919 chr12 53233079 53233289 + 18.9 0.000 promoter-TSS (NM_001243731) promoter-TSS (NM_001243731) -928 NM_001243730 5916 Hs.1497 NM_000966 ENSG00000172819 RARG NR1B3|RARC retinoic acid receptor gamma protein-coding chr19-616 chr19 46413346 46413556 + 18.9 0.000 5' UTR (NM_032040, exon 1 of 1) 5' UTR (NM_032040, exon 1 of 1) 113 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr2-2351 chr2 203626979 203627189 + 18.9 0.000 Intergenic Intergenic -79391 NM_001243078 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr2-2202 chr2 65367607 65367817 + 18.9 0.000 promoter-TSS (NM_001128210) promoter-TSS (NM_001128210) -934 NM_001128210 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr4-1016 chr4 7034913 7035123 + 18.9 0.000 intron (NR_033828, intron 3 of 3) intron (NR_033828, intron 3 of 3) 7983 NM_153376 257236 Hs.656757 NM_153376 ENSG00000173013 CCDC96 - coiled-coil domain containing 96 protein-coding chr12-286 chr12 51218112 51218322 + 18.9 0.000 promoter-TSS (NM_001351088) promoter-TSS (NM_001351088) -155 NM_001351088 5463 Hs.555886 NM_002702 ENSG00000184271 POU6F1 BRN5|MPOU|TCFB1 POU class 6 homeobox 1 protein-coding chr6-1014 chr6 44855986 44856196 + 18.9 0.000 intron (NM_181356, intron 12 of 12) intron (NM_181356, intron 12 of 12) -304210 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr18-393 chr18 2573479 2573689 + 18.9 0.000 intron (NM_006101, intron 2 of 16) intron (NM_006101, intron 2 of 16) 2027 NM_006101 10403 Hs.414407 NM_006101 ENSG00000080986 NDC80 HEC|HEC1|HsHec1|KNTC2|TID3|hsNDC80 NDC80 kinetochore complex component protein-coding chr3-2429 chr3 11499191 11499401 + 18.9 0.000 intron (NM_001349238, intron 17 of 17) MER119|DNA|hAT-Charlie 69502 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr6-654 chr6 36127584 36127794 + 18.9 0.000 Intergenic Intergenic -2824 NM_002754 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr6-634 chr6 53544846 53545056 + 18.9 0.000 5' UTR (NM_001197115, exon 1 of 15) 5' UTR (NM_001197115, exon 1 of 15) 150 NM_001498 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr14-324 chr14 60724190 60724400 + 18.9 0.000 promoter-TSS (NM_017420) promoter-TSS (NM_017420) 56 NM_017420 51804 Hs.97849 NM_017420 ENSG00000100625 SIX4 AREC3 SIX homeobox 4 protein-coding chr6-564 chr6 158720435 158720645 + 18.9 0.000 intron (NM_001242394, intron 10 of 17) intron (NM_001242394, intron 10 of 17) 44213 NR_037482 100500851 NR_037482 ENSG00000265558 MIR3918 mir-3918 microRNA 3918 ncRNA chr22-355 chr22 17571096 17571306 + 18.9 0.000 intron (NM_031481, intron 2 of 10) intron (NM_031481, intron 2 of 10) 7703 NM_031481 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr4-1481 chr4 13907426 13907636 + 18.9 0.000 intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -204437 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr1-830 chr1 203007443 203007653 + 18.9 0.000 promoter-TSS (NR_146289) promoter-TSS (NR_146289) -83 NR_146289 92703 Hs.497443 NM_138391 ENSG00000163444 TMEM183A C1orf37 transmembrane protein 183A protein-coding chr11-1853 chr11 95877502 95877712 + 18.9 0.000 intron (NM_201281, intron 3 of 15) MLT1C|LTR|ERVL-MaLR 46500 NM_201281 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr2-863 chr2 177430018 177430228 + 18.9 0.000 intron (NM_003659, intron 2 of 19) L1PA10|LINE|L1 37350 NM_003659 8540 Hs.516543 NM_003659 ENSG00000018510 AGPS ADAP-S|ADAS|ADHAPS|ADPS|ALDHPSY|RCDP3 alkylglycerone phosphate synthase protein-coding chr17-1192 chr17 68707051 68707261 + 18.9 0.000 Intergenic Intergenic 79002 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr22-636 chr22 17717849 17718059 + 18.9 0.000 intron (NM_001270733, intron 1 of 1) AluJr4|SINE|Alu 11296 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr12-435 chr12 124917428 124917638 + 18.9 0.000 Intergenic Intergenic 1986 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr3-1125 chr3 179304783 179304993 + 18.9 0.000 Intergenic Intergenic -18143 NM_001303426 51193 Hs.632578 NM_016331 ENSG00000121864 ZNF639 ANC-2H01|ANC_2H01|ZASC1 zinc finger protein 639 protein-coding chr19-1041 chr19 18496277 18496487 + 18.9 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 25688 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr16-1271 chr16 58651886 58652096 + 18.9 0.000 Intergenic AluSz|SINE|Alu -22165 NM_016284 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr10-678 chr10 121975019 121975229 + 18.9 0.000 promoter-TSS (NM_017615) promoter-TSS (NM_017615) 93 NM_001167865 54780 Hs.258798 NM_017615 ENSG00000107672 NSMCE4A C10orf86|NS4EA|NSE4A NSE4 homolog A, SMC5-SMC6 complex component protein-coding chr11-1395 chr11 1406746 1406956 + 18.9 0.000 intron (NM_003957, intron 1 of 19) (TG)n|Simple_repeat|Simple_repeat -3619 NM_001282218 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr21-80 chr21 45643125 45643335 + 18.9 0.000 promoter-TSS (NM_001348238) promoter-TSS (NM_001348238) -495 NM_001348239 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr12-786 chr12 47903878 47904088 + 18.9 0.000 intron (NM_001017535, intron 1 of 10) intron (NM_001017535, intron 1 of 10) 1011 NM_000376 7421 Hs.524368 NM_000376 ENSG00000111424 VDR NR1I1|PPP1R163 vitamin D receptor protein-coding chr2-1394 chr2 62411591 62411801 + 18.9 0.000 Intergenic Intergenic 94499 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr4-247 chr4 177442101 177442311 + 18.9 0.000 intron (NM_001171988, intron 1 of 8) CpG 231 NM_000027 175 Hs.207776 NM_000027 ENSG00000038002 AGA AGU|ASRG|GA aspartylglucosaminidase protein-coding chr14-753 chr14 69651718 69651928 + 18.9 0.000 intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 40227 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr9-576 chr9 97238310 97238520 + 18.9 0.000 promoter-TSS (NR_036526) promoter-TSS (NR_036526) -11 NR_036526 100499484 Hs.435629 NR_036526 ENSG00000254876 SUGT1P4-STRA6LP - SUGT1P4-STRA6LP readthrough pseudo chr10-614 chr10 102133730 102133940 + 18.9 0.000 intron (NM_001288728, intron 1 of 13) intron (NM_001288728, intron 1 of 13) 795 NM_015062 23082 Hs.533551 NM_015062 ENSG00000148840 PPRC1 PRC PPARG related coactivator 1 protein-coding chr14-493 chr14 100045899 100046109 + 18.9 0.000 intron (NM_001330221, intron 1 of 13) intron (NM_001330221, intron 1 of 13) -19418 NM_016337 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr3-955 chr3 18080171 18080381 + 18.9 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 117724 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr10-991 chr10 18340567 18340777 + 18.9 0.000 promoter-TSS (NM_201590) promoter-TSS (NM_201590) -37 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr13-517 chr13 37127906 37128116 + 18.9 0.000 Intergenic Intergenic -22347 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr2-2311 chr2 99389507 99389717 + 18.9 0.000 intron (NM_015904, intron 14 of 23) intron (NM_015904, intron 14 of 23) 52223 NM_015904 9669 Hs.158688 NM_015904 ENSG00000158417 EIF5B IF2 eukaryotic translation initiation factor 5B protein-coding chr17-993 chr17 57306021 57306231 + 18.9 0.000 intron (NM_001322250, intron 5 of 13) intron (NM_001322250, intron 5 of 13) 49107 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr21-120 chr21 45455201 45455411 + 18.9 0.000 promoter-TSS (NM_130444) promoter-TSS (NM_130444) -216 NM_030582 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr3-1335 chr3 111761495 111761705 + 18.9 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) 29104 NM_001134437 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr19-942 chr19 46856035 46856245 + 18.9 0.000 Intergenic L2b|LINE|L2 -4857 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr9-736 chr9 133658894 133659104 + 18.9 0.000 3' UTR (NM_000787, exon 12 of 12) 3' UTR (NM_000787, exon 12 of 12) -1591 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr3-1148 chr3 50136828 50137038 + 18.9 0.000 intron (NR_135301, intron 1 of 3) intron (NR_135301, intron 1 of 3) -18125 NM_001318798 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chr7-594 chr7 72925091 72925301 + 18.9 0.000 intron (NM_001257190, intron 4 of 15) CpG 29567 NR_033323 260294 Hs.510927 NM_148936 ENSG00000106133 NSUN5P2 NOL1R2|NSUN5C|WBSCR20B|WBSCR20C NSUN5 pseudogene 2 pseudo chr1-2190 chr1 51729425 51729635 + 18.9 0.000 promoter-TSS (NM_148905) promoter-TSS (NM_148905) -320 NM_148904 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr14-462 chr14 67187344 67187554 + 18.9 0.000 Intergenic L2c|LINE|L2 -1991 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding chr5-700 chr5 59193949 59194159 + 18.9 0.000 intron (NM_006203, intron 2 of 14) intron (NM_006203, intron 2 of 14) 82061 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-1865 chr2 23803296 23803506 + 18.9 0.000 intron (NR_125717, intron 19 of 28) intron (NR_125717, intron 19 of 28) 123722 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr1-997 chr1 17475869 17476079 + 18.9 0.000 Intergenic Intergenic -36297 NM_018715 55920 Hs.380857 NM_018715 ENSG00000179051 RCC2 TD-60 regulator of chromosome condensation 2 protein-coding chr13-644 chr13 24263825 24264035 + 18.9 0.000 intron (NM_153023, intron 3 of 11) intron (NM_153023, intron 3 of 11) -6757 NM_001286794 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr19-1363 chr19 479985 480195 + 18.9 0.000 Intergenic L2b|LINE|L2 -5107 NM_182577 284451 Hs.104777 NM_182577 ENSG00000181781 ODF3L2 C19orf19 outer dense fiber of sperm tails 3 like 2 protein-coding chr3-1905 chr3 157436785 157436995 + 18.9 0.000 promoter-TSS (NM_002852) promoter-TSS (NM_002852) 40 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr11-1038 chr11 3049977 3050187 + 18.9 0.000 intron (NR_036542, intron 1 of 22) intron (NR_036542, intron 1 of 22) 7341 NM_001751 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr2-1944 chr2 220499358 220499568 + 18.9 0.000 Intergenic Intergenic -592898 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr8-644 chr8 89984022 89984232 + 18.9 0.000 intron (NM_001024688, intron 1 of 16) intron (NM_001024688, intron 1 of 16) 544 NM_002485 4683 Hs.492208 NM_002485 ENSG00000104320 NBN AT-V1|AT-V2|ATV|NBS|NBS1|P95 nibrin protein-coding chr1-1288 chr1 228406187 228406397 + 18.9 0.000 exon (NM_145214, exon 1 of 6) exon (NM_145214, exon 1 of 6) 543 NM_145214 81559 Hs.13543 NM_145214 ENSG00000154370 TRIM11 BIA1|RNF92 tripartite motif containing 11 protein-coding chr3-1197 chr3 17287297 17287507 + 18.9 0.000 intron (NM_014744, intron 15 of 21) intron (NM_014744, intron 15 of 21) 354206 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr1-3355 chr1 78841098 78841308 + 18.9 0.000 Intergenic Intergenic 165527 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr11-413 chr11 13463174 13463384 + 18.9 0.000 promoter-TSS (NM_001297741) promoter-TSS (NM_001297741) 18 NM_032320 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr2-1755 chr2 108492490 108492700 + 18.9 0.000 exon (NM_181453, exon 19 of 23) exon (NM_181453, exon 19 of 23) 41624 NR_135290 644903 NM_032658 ENSG00000214184 GCC2-AS1 - GCC2 antisense RNA 1 ncRNA chr2-859 chr2 113117553 113117763 + 18.9 0.000 promoter-TSS (NM_173843) promoter-TSS (NM_173843) -235 NM_173841 3557 Hs.81134 NM_000577 ENSG00000136689 IL1RN DIRA|ICIL-1RA|IL-1RN|IL-1ra|IL-1ra3|IL1F3|IL1RA|IRAP|MVCD4 interleukin 1 receptor antagonist protein-coding chr6-964 chr6 53343214 53343424 + 18.9 0.000 intron (NM_001242830, intron 1 of 6) AluJb|SINE|Alu 5631 NM_021814 60481 Hs.520189 NM_021814 ENSG00000012660 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding chr1-1564 chr1 8941889 8942099 + 18.9 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -3874 NM_001270502 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr12-899 chr12 109020887 109021097 + 18.9 0.000 promoter-TSS (NM_018711) promoter-TSS (NM_018711) 76 NM_018711 55530 Hs.4221 NM_018711 ENSG00000166111 SVOP - SV2 related protein protein-coding chr19-779 chr19 45376307 45376517 + 18.9 0.000 Intergenic Intergenic -5825 NM_001130867 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2, TFIIH core complex helicase subunit protein-coding chr10-717 chr10 103145129 103145339 + 18.9 0.000 intron (NM_001351187, intron 3 of 21) intron (NM_001351187, intron 3 of 21) 8587 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr17-986 chr17 42781309 42781519 + 18.9 0.000 intron (NM_032387, intron 1 of 18) intron (NM_032387, intron 1 of 18) 804 NM_032387 65266 Hs.105448 NM_032387 ENSG00000126562 WNK4 PHA2B|PRKWNK4 WNK lysine deficient protein kinase 4 protein-coding chr1-1467 chr1 31789313 31789523 + 18.9 0.000 Intergenic Intergenic -25078 NM_001294335 576 Hs.524138 NM_001294335 ENSG00000121753 ADGRB2 BAI2 adhesion G protein-coupled receptor B2 protein-coding chr3-1526 chr3 172041677 172041887 + 18.9 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 1251 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr3-607 chr3 58237532 58237742 + 18.9 0.000 promoter-TSS (NM_001320126) promoter-TSS (NM_001320126) 135 NM_020676 57406 Hs.476454 NM_020676 ENSG00000163686 ABHD6 - abhydrolase domain containing 6 protein-coding chr9-1226 chr9 130962554 130962764 + 18.9 0.000 Intergenic Intergenic -23412 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr12-1063 chr12 122023583 122023793 + 18.9 0.000 intron (NM_001024808, intron 1 of 5) intron (NM_001024808, intron 1 of 5) 1804 NM_020993 605 Hs.530970 NM_020993 ENSG00000110987 BCL7A BCL7 BAF chromatin remodeling complex subunit BCL7A protein-coding chr3-1825 chr3 57078325 57078535 + 18.9 0.000 intron (NM_001128615, intron 1 of 12) intron (NM_001128615, intron 1 of 12) 838 NM_001128615 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr1-2958 chr1 100606537 100606747 + 18.9 0.000 Intergenic Intergenic 40362 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr2-1097 chr2 18118827 18119037 + 18.9 0.000 Intergenic Intergenic 240265 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr9-520 chr9 130053718 130053928 + 18.9 0.000 promoter-TSS (NM_001136557) promoter-TSS (NM_001136557) -83 NM_020960 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chr14-267 chr14 96234227 96234437 + 18.9 0.000 intron (NM_000623, intron 1 of 2) intron (NM_000623, intron 1 of 2) -21878 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr2-2700 chr2 36411880 36412090 + 18.9 0.000 intron (NM_016441, intron 2 of 16) intron (NM_016441, intron 2 of 16) 56207 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr7-888 chr7 1843393 1843603 + 18.9 0.000 TTS (NR_039799) TTS (NR_039799) 755 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr16-1024 chr16 89056990 89057200 + 18.9 0.000 Intergenic Intergenic -36714 NM_001243279 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr6-843 chr6 1670729 1670939 + 18.9 0.000 intron (NM_001253846, intron 9 of 10) intron (NM_001253846, intron 9 of 10) 60919 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr10-559 chr10 126905095 126905305 + 18.9 0.000 promoter-TSS (NM_001380) promoter-TSS (NM_001380) -209 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr20-740 chr20 9422382 9422592 + 18.9 0.000 intron (NM_000933, intron 23 of 35) intron (NM_000933, intron 23 of 35) -91871 NM_001199897 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chr12-645 chr12 22544400 22544610 + 18.9 0.000 promoter-TSS (NM_001286175) promoter-TSS (NM_001286175) 41 NM_001286177 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding chr4-691 chr4 2024895 2025105 + 18.9 0.000 Intergenic MER66-int|LTR|ERV1 -16026 NM_005663 7469 Hs.21771 NM_005663 ENSG00000185049 NELFA NELF-A|P/OKcl.15|WHSC2 negative elongation factor complex member A protein-coding chr9-788 chr9 128733404 128733614 + 18.9 0.000 TTS (NR_046240) TTS (NR_046240) 9047 NR_046240 100506100 Hs.62946 NR_046240 ENSG00000223478 LOC100506100 - uncharacterized LOC100506100 ncRNA chr11-811 chr11 12914490 12914700 + 18.9 0.000 intron (NM_021961, intron 10 of 12) intron (NM_021961, intron 10 of 12) 74953 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr2-2183 chr2 27051268 27051478 + 18.9 0.000 promoter-TSS (NM_001035507) promoter-TSS (NM_001035507) -50 NR_138023 60509 Hs.138207 NM_021831 ENSG00000084693 AGBL5 CCP5|RP75 ATP/GTP binding protein like 5 protein-coding chr15-387 chr15 82262591 82262801 + 18.9 0.000 promoter-TSS (NM_001348700) promoter-TSS (NM_001348700) 38 NM_024580 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr2-2180 chr2 26068685 26068895 + 18.9 0.000 intron (NM_016131, intron 1 of 5) intron (NM_016131, intron 1 of 5) 34706 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr16-554 chr16 31201829 31202039 + 18.9 0.000 promoter-TSS (NR_102400) promoter-TSS (NR_102400) 49 NR_102400 100652740 Hs.550659 NR_102400 ENSG00000261359 PYCARD-AS1 C16orf98|PYCARDOS PYCARD antisense RNA 1 ncRNA chr10-1265 chr10 124875692 124875902 + 18.9 0.000 Intergenic HAL1|LINE|L1 -66326 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr4-677 chr4 112285881 112286091 + 18.9 0.000 promoter-TSS (NM_052864) promoter-TSS (NM_052864) -82 NM_052864 92610 Hs.310640 NM_052864 ENSG00000145365 TIFA T2BP|T6BP|TIFAA TRAF interacting protein with forkhead associated domain protein-coding chr5-962 chr5 146283490 146283700 + 18.9 0.000 intron (NM_018989, intron 19 of 20) intron (NM_018989, intron 19 of 20) -55244 NM_002700 5459 Hs.553499 NM_002700 ENSG00000091010 POU4F3 BRN3C|DFNA15|DFNA42|DFNA52 POU class 4 homeobox 3 protein-coding chr7-1153 chr7 104979455 104979665 + 18.7 0.000 Intergenic Intergenic 11605 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr4-737 chr4 73816978 73817188 + 18.7 0.000 Intergenic Intergenic -19595 NM_002993 6372 Hs.164021 NM_002993 ENSG00000124875 CXCL6 CKA-3|GCP-2|GCP2|SCYB6 C-X-C motif chemokine ligand 6 protein-coding chr17-530 chr17 17237103 17237313 + 18.7 0.000 promoter-TSS (NM_001353229) promoter-TSS (NM_001353229) -40 NM_001353230 201163 Hs.31652 NM_144606 ENSG00000154803 FLCN BHD|DENND8B|FLCL folliculin protein-coding chr9-1016 chr9 110031748 110031958 + 18.7 0.000 intron (NM_147150, intron 7 of 9) intron (NM_147150, intron 7 of 9) -16745 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr2-2291 chr2 55026421 55026631 + 18.7 0.000 exon (NM_001321904, exon 4 of 10) exon (NM_001321904, exon 4 of 10) -16254 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr18-478 chr18 67410746 67410956 + 18.7 0.000 Intergenic Intergenic -105695 NR_033921 643542 Hs.652901 NR_033921 ENSG00000265533 LOC643542 - uncharacterized LOC643542 ncRNA chr10-847 chr10 33241174 33241384 + 18.7 0.000 intron (NM_001244973, intron 6 of 16) intron (NM_001244973, intron 6 of 16) 93388 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr12-916 chr12 48001060 48001270 + 18.7 0.000 intron (NM_001844, intron 1 of 53) intron (NM_001844, intron 1 of 53) 3311 NM_001844 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr11-368 chr11 59106840 59107050 + 18.7 0.000 promoter-TSS (NM_198947) promoter-TSS (NM_198947) -240 NM_001142704 374393 Hs.186579 NM_198947 ENSG00000189057 FAM111B CANP|POIKTMP family with sequence similarity 111 member B protein-coding chr2-1083 chr2 127615567 127615777 + 18.7 0.000 intron (NM_001080527, intron 25 of 46) LTR3B_|LTR|ERVK -30192 NM_001161415 2840 Hs.46453 NM_005291 ENSG00000144230 GPR17 - G protein-coupled receptor 17 protein-coding chr10-983 chr10 124641351 124641561 + 18.7 0.000 intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -62572 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr7-1213 chr7 86601033 86601243 + 18.7 0.000 Intergenic L1PA13|LINE|L1 -42771 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chr5-919 chr5 125190794 125191004 + 18.7 0.000 intron (NR_109882, intron 4 of 5) intron (NR_109882, intron 4 of 5) 154068 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr19-1000 chr19 48837121 48837331 + 18.7 0.000 promoter-TSS (NM_016246) promoter-TSS (NM_016246) -735 NM_016246 51171 Hs.18788 NM_016246 ENSG00000087076 HSD17B14 DHRS10|SDR47C1|retSDR3 hydroxysteroid 17-beta dehydrogenase 14 protein-coding chr14-406 chr14 73136473 73136683 + 18.7 0.000 promoter-TSS (NM_007318) promoter-TSS (NM_007318) 71 NM_000021 5663 Hs.3260 NM_000021 ENSG00000080815 PSEN1 ACNINV3|AD3|FAD|PS-1|PS1|S182 presenilin 1 protein-coding chr19-1551 chr19 48574693 48574903 + 18.7 0.000 promoter-TSS (NM_004605) promoter-TSS (NM_004605) -938 NM_004605 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr2-1338 chr2 135152506 135152716 + 18.7 0.000 intron (NM_001172435, intron 18 of 24) intron (NM_001172435, intron 18 of 24) 15983 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr11-1446 chr11 72141182 72141392 + 18.7 0.000 Intergenic L1MC4|LINE|L1 5562 NM_001318045 2352 Hs.352 NM_000804 ENSG00000110203 FOLR3 FR-G|FR-gamma|FRgamma|gamma-hFR folate receptor gamma protein-coding chr8-538 chr8 101376010 101376220 + 18.7 0.000 Intergenic Intergenic 7222 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr14-1037 chr14 80389116 80389326 + 18.7 0.000 intron (NR_038355, intron 5 of 8) intron (NR_038355, intron 5 of 8) -158164 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr9-1331 chr9 91857589 91857799 + 18.7 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 92534 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr15-487 chr15 38038805 38039015 + 18.7 0.000 Intergenic Intergenic -1483 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LINC02345 - long intergenic non-protein coding RNA 2345 ncRNA chr16-1445 chr16 69692037 69692247 + 18.7 0.000 exon (NM_006599, exon 12 of 14) exon (NM_006599, exon 12 of 14) 16533 NR_145753 109617018 NR_145753 SNORD13H - small nucleolar RNA, C/D box 13H snoRNA chr2-679 chr2 20617977 20618187 + 18.7 0.000 3' UTR (NM_022460, exon 7 of 7) 3' UTR (NM_022460, exon 7 of 7) -25534 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr9-1091 chr9 91992818 91993028 + 18.7 0.000 Intergenic Intergenic -42695 NM_001318204 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr4-847 chr4 26342421 26342631 + 18.7 0.000 intron (NM_001363577, intron 1 of 10) intron (NM_001363577, intron 1 of 10) 21298 NM_001363577 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr4-760 chr4 5790297 5790507 + 18.7 0.000 intron (NM_001306090, intron 12 of 20) intron (NM_001306090, intron 12 of 20) 79201 NM_153717 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr17-1463 chr17 50604563 50604773 + 18.7 0.000 intron (NR_046058, intron 21 of 33) intron (NR_046058, intron 21 of 33) -30213 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr16-474 chr16 2971375 2971585 + 18.7 0.000 intron (NM_001284511, intron 2 of 2) intron (NM_001284511, intron 2 of 2) 2132 NM_001284511 124222 Hs.351474 NM_152341 ENSG00000162073 PAQR4 - progestin and adipoQ receptor family member 4 protein-coding chr18-454 chr18 80027758 80027968 + 18.7 0.000 intron (NM_001305564, intron 1 of 2) PRIMA4-int|LTR|ERV1 6073 NM_001305563 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding chr1-1686 chr1 153670836 153671046 + 18.7 0.000 promoter-TSS (NM_001267809) promoter-TSS (NM_001267809) 52 NM_004515 3608 Hs.75117 NM_004515 ENSG00000143621 ILF2 NF45|PRO3063 interleukin enhancer binding factor 2 protein-coding chr8-624 chr8 144502778 144502988 + 18.7 0.000 TTS (NM_001329445) TTS (NM_001329445) -1257 NM_005309 2875 Hs.103502 NM_005309 ENSG00000167701 GPT AAT1|ALT1|GPT1 glutamic--pyruvic transaminase protein-coding chr1-1940 chr1 24914843 24915053 + 18.7 0.000 intron (NM_001320672, intron 5 of 6) L2a|LINE|L2 4468 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr12-631 chr12 51951308 51951518 + 18.7 0.000 promoter-TSS (NM_020328) promoter-TSS (NM_020328) -286 NM_004302 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr7-1120 chr7 157046867 157047077 + 18.7 0.000 Intergenic Intergenic 36115 NR_038835 645249 Hs.224879 NR_038835 ENSG00000243479 MNX1-AS1 CCAT5 MNX1 antisense RNA 1 (head to head) ncRNA chr19-1614 chr19 43127281 43127491 + 18.7 0.000 Intergenic L1MEc|LINE|L1 -44685 NM_031246 5670 Hs.709200 NM_031246 ENSG00000242221 PSG2 CEA|PSBG2|PSG1 pregnancy specific beta-1-glycoprotein 2 protein-coding chr2-1628 chr2 240464918 240465128 + 18.7 0.000 intron (NM_002081, intron 6 of 8) intron (NM_002081, intron 6 of 8) -8323 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr4-1096 chr4 183449555 183449765 + 18.7 0.000 TTS (NM_017632) TTS (NM_017632) 5024 NM_017632 55602 Hs.592508 NM_017632 ENSG00000168564 CDKN2AIP CARF CDKN2A interacting protein protein-coding chr15-306 chr15 65029407 65029617 + 18.7 0.000 exon (NM_139242, exon 1 of 9) exon (NM_139242, exon 1 of 9) 127 NM_139242 123263 Hs.531615 NM_139242 ENSG00000103707 MTFMT COXPD15|FMT1|MC1DN27 mitochondrial methionyl-tRNA formyltransferase protein-coding chr22-659 chr22 39365140 39365350 + 18.7 0.000 intron (NM_145738, intron 1 of 3) intron (NM_145738, intron 1 of 3) 1075 NM_145738 9145 Hs.216226 NM_004711 ENSG00000100321 SYNGR1 - synaptogyrin 1 protein-coding chr10-1316 chr10 75144237 75144447 + 18.7 0.000 intron (NM_144660, intron 1 of 4) L1MB3|LINE|L1 32686 NM_001174156 142891 Hs.744986 NM_144660 ENSG00000156671 SAMD8 HEL-177|SMSr sterile alpha motif domain containing 8 protein-coding chr11-1107 chr11 88320196 88320406 + 18.7 0.000 TTS (NM_001114173) TTS (NM_001114173) 17435 NM_001814 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding chr13-312 chr13 30158877 30159087 + 18.7 0.000 Intergenic Intergenic -5908 NR_138041 102157400 Hs.639879 NR_138041 LINC00384 - long intergenic non-protein coding RNA 384 ncRNA chr11-1245 chr11 75858706 75858916 + 18.7 0.000 intron (NM_003369, intron 2 of 14) L1ME4b|LINE|L1 43601 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr9-653 chr9 111482803 111483013 + 18.7 0.000 intron (NM_001364929, intron 1 of 49) CpG 654 NM_001364931 23392 Hs.368255 NM_001080398 ENSG00000136813 ECPAS ECM29|KIAA0368 Ecm29 proteasome adaptor and scaffold protein-coding chr2-3114 chr2 158325506 158325716 + 18.7 0.000 intron (NM_138803, intron 7 of 13) L2a|LINE|L2 131142 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr22-487 chr22 46844382 46844592 + 18.7 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 70560 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr8-331 chr8 29373336 29373546 + 18.7 0.000 Intergenic Intergenic -22757 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr11-1632 chr11 74773550 74773760 + 18.7 0.000 intron (NM_001098638, intron 1 of 5) Tigger10|DNA|TcMar-Tigger 24806 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr12-450 chr12 124755236 124755446 + 18.7 0.000 Intergenic Intergenic 84330 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr5-896 chr5 163504632 163504842 + 18.7 0.000 promoter-TSS (NM_013283) promoter-TSS (NM_013283) -882 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr8-499 chr8 78666304 78666514 + 18.7 0.000 intron (NM_001362969, intron 1 of 9) CpG 320 NM_001362969 51101 Hs.271876 NM_016010 ENSG00000104427 ZC2HC1A C8orf70|CGI-62|FAM164A zinc finger C2HC-type containing 1A protein-coding chr6-1179 chr6 128600480 128600690 + 18.7 0.000 Intergenic Intergenic -79986 NM_001291982 5796 Hs.155919 NM_002844 ENSG00000152894 PTPRK R-PTP-kappa protein tyrosine phosphatase receptor type K protein-coding chr2-3071 chr2 107591845 107592055 + 18.7 0.000 Intergenic Intergenic 62531 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA chr16-1269 chr16 57532968 57533178 + 18.7 0.000 intron (NM_033212, intron 1 of 8) intron (NM_033212, intron 1 of 8) 3498 NM_033212 92922 Hs.644611 NM_033212 ENSG00000135736 CCDC102A - coiled-coil domain containing 102A protein-coding chr3-295 chr3 196739812 196740022 + 18.7 0.000 promoter-TSS (NM_002577) promoter-TSS (NM_002577) 60 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr9-1474 chr9 105299466 105299676 + 18.7 0.000 intron (NM_001330731, intron 2 of 15) MIR3|SINE|MIR 54920 NM_001286730 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr10-467 chr10 13372022 13372232 + 18.7 0.000 Intergenic Intergenic -23829 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr5-1266 chr5 119274849 119275059 + 18.7 0.000 intron (NM_001077654, intron 1 of 1) intron (NM_001077654, intron 1 of 1) 6195 NM_001286815 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr6-2340 chr6 125102936 125103146 + 18.7 0.000 Intergenic MIR|SINE|MIR -50732 NM_003287 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr18-340 chr18 57846283 57846493 + 18.7 0.000 Intergenic L1ME3B|LINE|L1 -43073 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr5-847 chr5 79759516 79759726 + 18.7 0.000 intron (NM_153610, intron 7 of 12) L4_B_Mam|LINE|RTE-X 69785 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr1-3292 chr1 241838094 241838304 + 18.7 0.000 Intergenic Intergenic -9992 NM_001319224 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr22-710 chr22 49952293 49952503 + 18.7 0.000 Intergenic Intergenic -8374 NM_001001852 415116 Hs.530381 NM_001001852 ENSG00000198355 PIM3 pim-3 Pim-3 proto-oncogene, serine/threonine kinase protein-coding chr9-2049 chr9 14687166 14687376 + 18.7 0.000 intron (NM_001354129, intron 2 of 10) intron (NM_001354129, intron 2 of 10) 6161 NM_001354130 340481 Hs.649522 NM_178566 ENSG00000175893 ZDHHC21 DHHC-21|DHHC21|DNZ1|HSPC097 zinc finger DHHC-type containing 21 protein-coding chr9-1393 chr9 95100114 95100324 + 18.7 0.000 3' UTR (NM_000136, exon 15 of 15) 3' UTR (NM_000136, exon 15 of 15) -14125 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr8-949 chr8 72101985 72102195 + 18.7 0.000 Intergenic PABL_B-int|LTR|ERV1 -26506 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr14-441 chr14 21087424 21087634 + 18.7 0.000 intron (NM_018071, intron 21 of 23) intron (NM_018071, intron 21 of 23) 11126 NM_016423 51222 Hs.250493 NM_016423 ENSG00000165804 ZNF219 ZFP219 zinc finger protein 219 protein-coding chr9-707 chr9 112867672 112867882 + 18.7 0.000 intron (NM_001012994, intron 8 of 8) intron (NM_001012994, intron 8 of 8) 23099 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr12-870 chr12 50390278 50390488 + 18.7 0.000 intron (NM_001145475, intron 1 of 7) ERVL-B4-int|LTR|ERVL 6226 NM_001145475 121006 Hs.133187 NM_001145475 ENSG00000185958 FAM186A - family with sequence similarity 186 member A protein-coding chr16-1299 chr16 85592734 85592944 + 18.7 0.000 Intergenic MIR|SINE|MIR -18570 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr19-884 chr19 1383252 1383462 + 18.7 0.000 promoter-TSS (NM_001363602) promoter-TSS (NM_001363602) -550 NM_001363602 374291 Hs.211914 NM_024407 ENSG00000115286 NDUFS7 CI-20|CI-20KD|MC1DN3|MY017|PSST NADH:ubiquinone oxidoreductase core subunit S7 protein-coding chr1-2076 chr1 36161013 36161223 + 18.7 0.000 intron (NM_018067, intron 1 of 16) intron (NM_018067, intron 1 of 16) 4958 NM_018067 55700 Hs.356096 NM_018067 ENSG00000116871 MAP7D1 PARCC1|RPRC1 MAP7 domain containing 1 protein-coding chr11-1585 chr11 899635 899845 + 18.7 0.000 intron (NM_023947, intron 6 of 12) intron (NM_023947, intron 6 of 12) 11070 NM_001142677 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr2-2485 chr2 134372857 134373067 + 18.7 0.000 intron (NM_001371457, intron 11 of 16) intron (NM_001371457, intron 11 of 16) 118890 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr7-715 chr7 116395346 116395556 + 18.7 0.000 Intergenic Intergenic -104287 NM_198212 858 Hs.212332 NM_001233 ENSG00000105971 CAV2 CAV caveolin 2 protein-coding chr12-402 chr12 53452521 53452731 + 18.7 0.000 intron (NM_001128912, intron 1 of 14) CpG 524 NM_031989 5094 Hs.546271 NM_005016 ENSG00000197111 PCBP2 HNRNPE2|HNRPE2|hnRNP-E2 poly(rC) binding protein 2 protein-coding chr4-1716 chr4 182277445 182277655 + 18.7 0.000 intron (NM_001080477, intron 1 of 27) intron (NM_001080477, intron 1 of 27) 34148 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr1-1281 chr1 147242379 147242589 + 18.7 0.000 promoter-TSS (NM_001348452) promoter-TSS (NM_001348452) -200 NM_001348456 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr2-1430 chr2 204892948 204893158 + 18.7 0.000 intron (NM_205863, intron 2 of 21) L2b|LINE|L2 347578 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr11-1096 chr11 27234239 27234449 + 18.7 0.000 Intergenic Intergenic -14231 NR_125767 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr5-1102 chr5 150485635 150485845 + 18.7 0.000 intron (NR_105061, intron 1 of 2) CpG 252 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chr2-1469 chr2 67872185 67872395 + 18.7 0.000 Intergenic Intergenic -46728 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr17-1731 chr17 76791402 76791612 + 18.7 0.000 Intergenic Intergenic -7537 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr7-1664 chr7 101784858 101785068 + 18.7 0.000 Intergenic Intergenic -31044 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr11-2890 chr11 46040038 46040248 + 18.7 0.000 intron (NR_147890, intron 5 of 18) intron (NR_147890, intron 5 of 18) 80676 NM_001352029 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr21-154 chr21 42913667 42913877 + 18.7 0.000 TTS (NM_021075) TTS (NM_021075) 11826 NM_001308491 90625 NM_001308491 ERVH48-1 C21orf105|NDUFV3-AS1 endogenous retrovirus group 48 member 1 protein-coding chr16-1253 chr16 10829046 10829256 + 18.7 0.000 Intergenic Intergenic -10357 NR_134906 780776 Hs.371576 NM_001079512 ENSG00000166676 TVP23A FAM18A|YDR084C trans-golgi network vesicle protein 23 homolog A protein-coding chr8-561 chr8 70534590 70534800 + 18.7 0.000 Intergenic Intergenic 63561 NR_110653 101926892 Hs.367827 NR_110653 ENSG00000253967 LOC101926892 - uncharacterized LOC101926892 ncRNA chr12-663 chr12 111841908 111842118 + 18.7 0.000 promoter-TSS (NR_152608) promoter-TSS (NR_152608) -83 NR_152605 51275 Hs.333120 NR_015404 ENSG00000234608 MAPKAPK5-AS1 C12orf47 MAPKAPK5 antisense RNA 1 ncRNA chr2-2078 chr2 217994926 217995136 + 18.7 0.000 Intergenic Intergenic 16324 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr1-893 chr1 86704681 86704891 + 18.7 0.000 promoter-TSS (NR_135837) promoter-TSS (NR_135837) 210 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr2-1442 chr2 234970358 234970568 + 18.7 0.000 intron (NM_001371302, intron 1 of 5) intron (NM_001371302, intron 1 of 5) 5124 NM_001371302 chr16-645 chr16 66516674 66516884 + 18.7 0.000 intron (NM_001271935, intron 6 of 7) L2a|LINE|L2 33343 NR_073520 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2 protein-coding chr7-2165 chr7 66004861 66005071 + 18.7 0.000 Intergenic LTR5B|LTR|ERVK -22753 NM_001293105 2990 Hs.255230 NM_000181 ENSG00000169919 GUSB BG|MPS7 glucuronidase beta protein-coding chr17-874 chr17 2240317 2240527 + 18.7 0.000 intron (NM_001256827, intron 2 of 11) intron (NM_001256827, intron 2 of 11) -3575 NM_001256828 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr14-423 chr14 80996385 80996595 + 18.7 0.000 intron (NM_001142626, intron 1 of 8) intron (NM_001142626, intron 1 of 8) 40869 NM_001142626 7253 Hs.160411 NM_000369 ENSG00000165409 TSHR CHNG1|LGR3|hTSHR-I thyroid stimulating hormone receptor protein-coding chr8-226 chr8 38269235 38269445 + 18.7 0.000 promoter-TSS (NM_001354452) promoter-TSS (NM_001354452) -108 NM_001354454 84513 Hs.567619 NM_032483 ENSG00000147535 PLPP5 DPPL1|HTPAP|PPAPDC1B phospholipid phosphatase 5 protein-coding chr12-1196 chr12 107027706 107027916 + 18.7 0.000 intron (NM_004075, intron 1 of 12) intron (NM_004075, intron 1 of 12) -40645 NM_025198 80298 Hs.5009 NM_025198 ENSG00000120832 MTERF2 MTERFD3|mTERFL mitochondrial transcription termination factor 2 protein-coding chr17-1187 chr17 63612330 63612540 + 18.7 0.000 Intergenic Intergenic -9982 NM_002401 4215 Hs.29282 NM_002401 ENSG00000198909 MAP3K3 MAPKKK3|MEKK3 mitogen-activated protein kinase kinase kinase 3 protein-coding chr13-572 chr13 42066683 42066893 + 18.7 0.000 intron (NM_178009, intron 1 of 29) Tigger17a|DNA|TcMar-Tigger 18140 NM_178009 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr14-662 chr14 60276274 60276484 + 18.7 0.000 intron (NM_177951, intron 2 of 3) intron (NM_177951, intron 2 of 3) 27158 NM_021003 5494 Hs.130036 NM_021003 ENSG00000100614 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent 1A protein-coding chr20-542 chr20 50713669 50713879 + 18.7 0.000 Intergenic Intergenic -17806 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr20-586 chr20 19427604 19427814 + 18.7 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -143113 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr10-1492 chr10 5018827 5019037 + 18.7 0.000 promoter-TSS (NM_205845) promoter-TSS (NM_205845) -899 NM_205845 1646 Hs.460260 NM_001354 ENSG00000151632 AKR1C2 AKR1C-pseudo|BABP|DD|DD-2|DD/BABP|DD2|DDH2|HAKRD|HBAB|MCDR2|SRXY8|TDD aldo-keto reductase family 1 member C2 protein-coding chr7-1849 chr7 155230318 155230528 + 18.7 0.000 Intergenic Intergenic -67349 NM_001346590 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr14-1124 chr14 96567277 96567487 + 18.7 0.000 TTS (NM_001293632) TTS (NM_001293632) 64517 NM_001293628 10914 Hs.253726 NM_032632 ENSG00000090060 PAPOLA PAP|PAP-alpha poly(A) polymerase alpha protein-coding chr2-830 chr2 87542641 87542851 + 18.7 0.000 Intergenic Intergenic 72796 NR_146460 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr16-643 chr16 47732941 47733151 + 18.7 0.000 Intergenic Intergenic -125535 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA chr7-819 chr7 25857018 25857228 + 18.7 0.000 Intergenic CpG -67004 NR_157808 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr17-798 chr17 47621805 47622015 + 18.7 0.000 exon (NM_006310, exon 23 of 23) exon (NM_006310, exon 23 of 23) -28009 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr15-342 chr15 75274509 75274719 + 18.7 0.000 Intergenic Intergenic -8227 NM_001145224 653643 Hs.672474 NM_001145224 ENSG00000140478 GOLGA6D - golgin A6 family member D protein-coding chr6-385 chr6 46323412 46323622 + 18.7 0.000 intron (NR_125838, intron 2 of 3) intron (NR_125838, intron 2 of 3) 2375 NM_005822 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr8-455 chr8 94259157 94259367 + 18.7 0.000 intron (NM_005261, intron 2 of 4) intron (NM_005261, intron 2 of 4) 3057 NM_005261 2669 Hs.654463 NM_005261 ENSG00000164949 GEM KIR GTP binding protein overexpressed in skeletal muscle protein-coding chr1-1810 chr1 202460168 202460378 + 18.7 0.000 intron (NM_002481, intron 13 of 23) intron (NM_002481, intron 13 of 23) -2441 NM_032104 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr11-2261 chr11 119417710 119417920 + 18.7 0.000 TTS (NM_001311162) TTS (NM_001311162) 4747 NM_001311160 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr12-995 chr12 121859119 121859329 + 18.7 0.000 promoter-TSS (NM_002150) promoter-TSS (NM_002150) -365 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr2-1899 chr2 138974723 138974933 + 18.7 0.000 Intergenic L1MEg|LINE|L1 77504 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr16-726 chr16 72241967 72242177 + 18.7 0.000 Intergenic Intergenic -69622 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr1-856 chr1 35573350 35573560 + 18.7 0.000 5' UTR (NM_178548, exon 1 of 7) 5' UTR (NM_178548, exon 1 of 7) 141 NM_178548 339488 Hs.567844 NM_178548 ENSG00000116819 TFAP2E AP2E transcription factor AP-2 epsilon protein-coding chr17-1099 chr17 71438907 71439117 + 18.7 0.000 Intergenic Intergenic -236833 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr21-182 chr21 33901879 33902089 + 18.7 0.000 Intergenic Intergenic 13820 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chrX-401 chrX 48631519 48631729 + 18.7 0.000 Intergenic Intergenic 34132 NM_001347217 64743 Hs.521973 NM_017883 ENSG00000101940 WDR13 MG21 WD repeat domain 13 protein-coding chr10-1415 chr10 119247143 119247353 + 18.7 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 39677 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr17-1302 chr17 50950643 50950853 + 18.7 0.000 Intergenic L2|LINE|L2 -82770 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr17-1124 chr17 40209431 40209641 + 18.7 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -9768 NM_133264 147179 Hs.421622 NM_133264 ENSG00000171475 WIPF2 WICH|WIRE WAS/WASL interacting protein family member 2 protein-coding chr11-2074 chr11 83724731 83724941 + 18.7 0.000 intron (NM_001142699, intron 18 of 27) intron (NM_001142699, intron 18 of 27) -42411 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-393 chr12 104958450 104958660 + 18.7 0.000 promoter-TSS (NM_001352170) promoter-TSS (NM_001352170) 189 NM_001352169 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr18-354 chr18 21191981 21192191 + 18.7 0.000 Intergenic LTR16B2|LTR|ERVL -50156 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr3-1471 chr3 65776646 65776856 + 18.7 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -117065 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr7-2375 chr7 30369970 30370180 + 18.7 0.000 promoter-TSS (NR_002186) promoter-TSS (NR_002186) 25 NR_002186 222161 Hs.112423 NR_002186 DKFZP586I1420 - uncharacterized protein DKFZp586I1420 pseudo chr13-507 chr13 98445481 98445691 + 18.7 0.000 intron (NM_005766, intron 24 of 26) intron (NM_005766, intron 24 of 26) 76539 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr15-185 chr15 43185235 43185445 + 18.7 0.000 promoter-TSS (NR_045998) promoter-TSS (NR_045998) -63 NR_027513 23582 Hs.36794 NM_012142 ENSG00000166946 CCNDBP1 DIP1|GCIP|HHM cyclin D1 binding protein 1 protein-coding chr5-1560 chr5 96318055 96318265 + 18.7 0.000 intron (NR_130776, intron 2 of 4) intron (NR_130776, intron 2 of 4) 113999 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr10-562 chr10 5811515 5811725 + 18.7 0.000 intron (NM_001494, intron 1 of 10) intron (NM_001494, intron 1 of 10) 1814 NM_001494 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr5-632 chr5 163503214 163503424 + 18.7 0.000 5' UTR (NM_182796, exon 1 of 7) 5' UTR (NM_182796, exon 1 of 7) 255 NM_182796 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr8-388 chr8 48192193 48192403 + 18.7 0.000 Intergenic Intergenic 183867 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr11-1531 chr11 125626251 125626461 + 18.7 0.000 promoter-TSS (NM_001274) promoter-TSS (NM_001274) 0 NM_001274 1111 Hs.24529 NM_001274 ENSG00000149554 CHEK1 CHK1 checkpoint kinase 1 protein-coding chr7-443 chr7 127585385 127585595 + 18.7 0.000 5' UTR (NM_024523, exon 1 of 2) 5' UTR (NM_024523, exon 1 of 2) 106 NM_024523 79571 Hs.521168 NM_024523 ENSG00000179562 GCC1 GCC1P|GCC88 GRIP and coiled-coil domain containing 1 protein-coding chr1-1634 chr1 164772802 164773012 + 18.7 0.000 intron (NR_038072, intron 1 of 3) intron (NR_038072, intron 1 of 3) 1734 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr21-85 chr21 33588008 33588218 + 18.7 0.000 intron (NM_017613, intron 1 of 9) CpG 571 NM_017613 29980 Hs.436341 NM_017613 ENSG00000159147 DONSON B17|C21orf60|MIMIS|MISSLA downstream neighbor of SON protein-coding chr14-426 chr14 94769992 94770202 + 18.7 0.000 promoter-TSS (NR_144432) promoter-TSS (NR_144432) 65 NM_173849 145258 Hs.440438 NM_173849 ENSG00000133937 GSC SAMS goosecoid homeobox protein-coding chr4-710 chr4 94690866 94691076 + 18.7 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 66562 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr7-804 chr7 92179016 92179226 + 18.7 0.000 non-coding (NR_122109, exon 5 of 5) non-coding (NR_122109, exon 5 of 5) -13845 NM_001161528 401387 Hs.671729 NM_001045475 ENSG00000240720 LRRD1 - leucine rich repeats and death domain containing 1 protein-coding chr16-1604 chr16 68093954 68094164 + 18.7 0.000 intron (NM_004555, intron 1 of 10) intron (NM_004555, intron 1 of 10) 8689 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr15-349 chr15 92714665 92714875 + 18.7 0.000 Intergenic CpG -58995 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr17-1864 chr17 32259564 32259774 + 18.7 0.000 Intergenic Intergenic -6163 NM_138328 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr11-1112 chr11 118916948 118917158 + 18.7 0.000 Intergenic Intergenic 6345 NR_039713 100616376 NR_039713 ENSG00000264211 MIR4492 mir-4492 microRNA 4492 ncRNA chr20-380 chr20 31678526 31678736 + 18.7 0.000 intron (NR_134257, intron 1 of 2) intron (NR_134257, intron 1 of 2) 40719 NM_032609 84701 Hs.277101 NM_032609 ENSG00000131055 COX4I2 COX4|COX4-2|COX4B|COX4L2|COXIV-2|dJ857M17.2 cytochrome c oxidase subunit 4I2 protein-coding chr12-1392 chr12 107092209 107092419 + 18.7 0.000 intron (NM_004075, intron 1 of 12) intron (NM_004075, intron 1 of 12) 1235 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr3-514 chr3 19947121 19947331 + 18.7 0.000 promoter-TSS (NM_001330688) promoter-TSS (NM_001330688) 129 NM_004162 5868 Hs.475663 NM_004162 ENSG00000144566 RAB5A RAB5 RAB5A, member RAS oncogene family protein-coding chr12-1131 chr12 76863566 76863776 + 18.7 0.000 intron (NM_001321, intron 2 of 5) intron (NM_001321, intron 2 of 5) 15348 NM_001300965 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr2-544 chr2 88055650 88055860 + 18.7 0.000 promoter-TSS (NM_016618) promoter-TSS (NM_016618) 28 NM_001304526 51315 Hs.469254 NM_016618 ENSG00000172086 KRCC1 CHBP2 lysine rich coiled-coil 1 protein-coding chr9-2037 chr9 137427504 137427714 + 18.7 0.000 intron (NM_006647, intron 2 of 13) intron (NM_006647, intron 2 of 13) 4214 NM_001256068 10811 Hs.495554 NM_006647 ENSG00000188747 NOXA1 NY-CO-31|SDCCAG31|p51NOX NADPH oxidase activator 1 protein-coding chr11-1284 chr11 78149729 78149939 + 18.7 0.000 intron (NR_102281, intron 2 of 2) MIR|SINE|MIR 10041 NR_102280 100289388 Hs.628183 NM_203432 ENSG00000246174 KCTD21-AS1 - KCTD21 antisense RNA 1 ncRNA chr5-644 chr5 139293556 139293766 + 18.7 0.000 promoter-TSS (NM_001194955) promoter-TSS (NM_001194955) -79 NM_018834 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding chr11-2087 chr11 102223771 102223981 + 18.7 0.000 intron (NM_001130145, intron 7 of 8) intron (NM_001130145, intron 7 of 8) -93608 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr5-526 chr5 10551451 10551661 + 18.7 0.000 Intergenic Intergenic -12514 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr20-424 chr20 833594 833804 + 18.7 0.000 promoter-TSS (NM_001289146) promoter-TSS (NM_001289146) -16 NM_001289145 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding chr3-1241 chr3 135927278 135927488 + 18.7 0.000 Intergenic Intergenic -38345 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr18-669 chr18 54679629 54679839 + 18.7 0.000 Intergenic Intergenic 88575 NM_173629 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr10-625 chr10 20598711 20598921 + 18.7 0.000 Intergenic Intergenic 46846 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr1-633 chr1 95233928 95234138 + 18.7 0.000 promoter-TSS (NM_001128142) promoter-TSS (NM_001128142) -51 NR_125948 101928118 Hs.656443 NR_125948 ENSG00000226026 LOC101928118 - uncharacterized LOC101928118 ncRNA chr4-636 chr4 40663396 40663606 + 18.7 0.000 Intergenic Intergenic -32907 NM_001371114 chr15-237 chr15 89814832 89815042 + 18.7 0.000 promoter-TSS (NM_001150) promoter-TSS (NM_001150) -85 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr3-562 chr3 13496457 13496667 + 18.7 0.000 intron (NM_001330636, intron 3 of 6) intron (NM_001330636, intron 3 of 6) 16256 NM_001136041 79885 Hs.744132 NM_024827 ENSG00000163517 HDAC11 HD11 histone deacetylase 11 protein-coding chr12-507 chr12 57430960 57431170 + 18.7 0.000 promoter-TSS (NM_001330123) promoter-TSS (NM_001330123) -22 NM_001351204 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chrX-169 chrX 53281270 53281480 + 18.7 0.000 intron (NM_001243197, intron 1 of 2) intron (NM_001243197, intron 1 of 2) 209 NM_001243197 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr17-1263 chr17 43360870 43361080 + 18.7 0.000 Intergenic CpG 27923 NR_027413 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chr15-302 chr15 101193200 101193410 + 18.7 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 58743 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chrX-279 chrX 57929434 57929644 + 18.7 0.000 Intergenic LTR55|LTR|ERVL? -18906 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr14-384 chr14 37035023 37035233 + 18.7 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -82737 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr12-1393 chr12 107461415 107461625 + 18.7 0.000 intron (NM_001347944, intron 1 of 14) MLT1C|LTR|ERVL-MaLR -119354 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr16-1016 chr16 85160473 85160683 + 18.7 0.000 Intergenic Intergenic 23428 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr13-337 chr13 36819218 36819428 + 18.7 0.000 5' UTR (NM_000538, exon 1 of 3) 5' UTR (NM_000538, exon 1 of 3) 121 NM_000538 5994 Hs.24422 NM_000538 ENSG00000133111 RFXAP - regulatory factor X associated protein protein-coding chr3-1096 chr3 15428588 15428798 + 18.7 0.000 intron (NM_033083, intron 1 of 5) intron (NM_033083, intron 1 of 5) 1095 NM_033083 85403 Hs.716733 NM_033083 ENSG00000144597 EAF1 - ELL associated factor 1 protein-coding chr1-2189 chr1 51558646 51558856 + 18.7 0.000 Intergenic LTR8|LTR|ERV1 24980 NR_161259 441884 NR_161259 CALR4P - calreticulin 4, pseudogene pseudo chr19-890 chr19 12140220 12140430 + 18.7 0.000 promoter-TSS (NM_001203250) promoter-TSS (NM_001203250) 25 NM_001203250 7568 Hs.512823 NM_021143 ENSG00000132010 ZNF20 KOX13 zinc finger protein 20 protein-coding chr1-1712 chr1 19445913 19446123 + 18.7 0.000 intron (NM_001206540, intron 1 of 9) intron (NM_001206540, intron 1 of 9) 38277 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr5-705 chr5 64595129 64595339 + 18.7 0.000 intron (NM_001271891, intron 2 of 3) intron (NM_001271891, intron 2 of 3) 19584 NM_001271890 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr2-1254 chr2 20543205 20543415 + 18.7 0.000 Intergenic Intergenic -41786 NR_157978 107985856 NR_157978 LOC107985856 - uncharacterized LOC107985856 ncRNA chr3-1021 chr3 124559229 124559439 + 18.7 0.000 intron (NM_001024660, intron 33 of 59) intron (NM_001024660, intron 33 of 59) -25324 NM_001322995 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr4-521 chr4 726555 726765 + 18.7 0.000 intron (NM_001317836, intron 1 of 11) intron (NM_001317836, intron 1 of 11) 20828 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr2-1016 chr2 1817468 1817678 + 18.7 0.000 intron (NM_015025, intron 21 of 24) intron (NM_015025, intron 21 of 24) -73058 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr6-1115 chr6 131250882 131251092 + 18.7 0.000 intron (NM_004842, intron 1 of 1) intron (NM_004842, intron 1 of 1) 583 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr9-1292 chr9 77712887 77713097 + 18.7 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger -64670 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr2-1296 chr2 205660561 205660771 + 18.7 0.000 Intergenic Intergenic -21834 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr14-667 chr14 68563453 68563663 + 18.6 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 65229 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr13-374 chr13 42001805 42002015 + 18.6 0.000 Intergenic LTR16E2|LTR|ERVL -38126 NM_001204504 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr17-723 chr17 18967369 18967579 + 18.6 0.000 intron (NM_001270648, intron 5 of 13) L2|LINE|L2 15309 NM_152351 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr3-1282 chr3 45092267 45092477 + 18.6 0.000 intron (NM_022842, intron 6 of 8) intron (NM_022842, intron 6 of 8) 54006 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr11-1066 chr11 66727581 66727791 + 18.6 0.000 Intergenic CpG -6287 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr18-345 chr18 62188160 62188370 + 18.6 0.000 intron (NR_144409, intron 1 of 31) intron (NR_144409, intron 1 of 31) 1010 NR_144412 57614 Hs.465323 NM_020854 ENSG00000134444 RELCH HsT3308|HsT885|KIAA1468 RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing protein-coding chr17-1183 chr17 57869956 57870166 + 18.6 0.000 intron (NM_001271875, intron 6 of 10) intron (NM_001271875, intron 6 of 10) -20017 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr7-878 chr7 123747676 123747886 + 18.6 0.000 intron (NM_003941, intron 1 of 10) intron (NM_003941, intron 1 of 10) 1222 NM_003941 8976 Hs.143728 NM_003941 ENSG00000106299 WASL N-WASP|NWASP|WASPB WASP like actin nucleation promoting factor protein-coding chr11-2091 chr11 105236720 105236930 + 18.6 0.000 Intergenic L1PA16|LINE|L1 -97056 NM_021571 59082 Hs.56279 NM_021571 ENSG00000255501 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family member 18 protein-coding chr12-433 chr12 121794378 121794588 + 18.6 0.000 promoter-TSS (NM_019034) promoter-TSS (NM_019034) -795 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr10-715 chr10 98235948 98236158 + 18.6 0.000 exon (NM_001351011, exon 10 of 11) exon (NM_001351011, exon 10 of 11) 32141 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr12-1088 chr12 75489651 75489861 + 18.6 0.000 intron (NM_006851, intron 2 of 5) L2a|LINE|L2 9001 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr15-404 chr15 72226724 72226934 + 18.6 0.000 intron (NM_001206798, intron 1 of 10) intron (NM_001206798, intron 1 of 10) 3082 NM_001206799 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr13-347 chr13 95301604 95301814 + 18.6 0.000 promoter-TSS (NM_001301829) promoter-TSS (NM_001301829) -258 NM_001105515 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr15-621 chr15 50355278 50355488 + 18.6 0.000 promoter-TSS (NM_002041) promoter-TSS (NM_002041) 25 NM_002041 2553 Hs.654350 NM_002041 ENSG00000104064 GABPB1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4TF1B|GABPB|GABPB-1|GABPB2|NRF2B1|NRF2B2 GA binding protein transcription factor subunit beta 1 protein-coding chr1-1727 chr1 59117122 59117332 + 18.6 0.000 Intergenic LTR85c|LTR|Gypsy? 29580 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr1-4419 chr1 214427790 214428000 + 18.6 0.000 intron (NM_005401, intron 3 of 18) L2a|LINE|L2 123707 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr4-629 chr4 2794679 2794889 + 18.6 0.000 intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) 1699 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr1-1098 chr1 146938304 146938514 + 18.6 0.000 promoter-TSS (NM_001278141) promoter-TSS (NM_001278141) -136 NM_001278141 149013 Hs.666981 NM_001278141 ENSG00000268043 NBPF12 COAS1|KIAA1245 NBPF member 12 protein-coding chr6-1081 chr6 45896826 45897036 + 18.6 0.000 Intergenic Intergenic 40666 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr5-1167 chr5 10267684 10267894 + 18.6 0.000 Intergenic Charlie1a|DNA|hAT-Charlie 17252 NM_001306155 22948 Hs.1600 NM_012073 ENSG00000150753 CCT5 CCT-epsilon|CCTE|HEL-S-69|PNAS-102|TCP-1-epsilon chaperonin containing TCP1 subunit 5 protein-coding chr19-996 chr19 43463861 43464071 + 18.6 0.000 intron (NM_014400, intron 2 of 4) CpG-14618 1642 NM_014400 27076 Hs.631594 NM_014400 ENSG00000124466 LYPD3 C4.4A LY6/PLAUR domain containing 3 protein-coding chr22-259 chr22 21014193 21014403 + 18.6 0.000 promoter-TSS (NR_003608) promoter-TSS (NR_003608) -11 NR_003608 113691 Hs.585006 NR_003608 ENSG00000161149 TUBA3FP - tubulin alpha 3f pseudogene pseudo chr1-2416 chr1 1136430 1136640 + 18.6 0.000 promoter-TSS (NR_038869) promoter-TSS (NR_038869) -482 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA chr6-520 chr6 157314821 157315031 + 18.6 0.000 intron (NM_018452, intron 3 of 3) intron (NM_018452, intron 3 of 3) 9333 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr2-1012 chr2 237315241 237315451 + 18.6 0.000 Intergenic Intergenic 98818 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr12-456 chr12 56041678 56041888 + 18.6 0.000 promoter-TSS (NM_001029) promoter-TSS (NM_001029) -135 NM_001029 6231 Hs.447562 NM_001029 ENSG00000197728 RPS26 DBA10|S26|eS26 ribosomal protein S26 protein-coding chr3-779 chr3 45012116 45012326 + 18.6 0.000 TTS (NM_015004) TTS (NM_015004) -14082 NM_003278 7123 Hs.476092 NM_003278 ENSG00000163815 CLEC3B TN|TNA C-type lectin domain family 3 member B protein-coding chr2-1282 chr2 101767232 101767442 + 18.6 0.000 intron (NM_145686, intron 2 of 30) intron (NM_145686, intron 2 of 30) 69630 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr12-2625 chr12 125054119 125054329 + 18.6 0.000 Intergenic Intergenic -11211 NM_001319840 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr6-513 chr6 42075510 42075720 + 18.6 0.000 intron (NM_138572, intron 7 of 8) intron (NM_138572, intron 7 of 8) 25091 NM_138572 129685 Hs.520122 NM_138572 ENSG00000137413 TAF8 II|TAF|TAF(II)43|TAFII-43|TAFII43|TBN TATA-box binding protein associated factor 8 protein-coding chr5-1661 chr5 32461632 32461842 + 18.6 0.000 Intergenic Intergenic -16997 NM_016107 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr13-473 chr13 44932765 44932975 + 18.6 0.000 Intergenic Intergenic 56601 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 nuclear FMR1 interacting protein 1 protein-coding chr15-508 chr15 51121234 51121444 + 18.6 0.000 intron (NR_146310, intron 1 of 2) intron (NR_146310, intron 1 of 2) -16063 NM_207381 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr2-1982 chr2 31318443 31318653 + 18.6 0.000 Intergenic Charlie20a|DNA|hAT-Charlie 84396 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding chr11-3306 chr11 101915802 101916012 + 18.6 0.000 intron (NM_001363543, intron 1 of 11) intron (NM_001363543, intron 1 of 11) 615 NM_178127 253935 Hs.318370 NM_178127 ENSG00000187151 ANGPTL5 - angiopoietin like 5 protein-coding chr13-417 chr13 72295200 72295410 + 18.6 0.000 Intergenic Intergenic -428101 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr1-3582 chr1 5915890 5916100 + 18.6 0.000 intron (NR_111987, intron 11 of 32) intron (NR_111987, intron 11 of 32) -53254 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr1-2449 chr1 37575085 37575295 + 18.6 0.000 intron (NM_013285, intron 10 of 15) intron (NM_013285, intron 10 of 15) 18250 NM_003462 7802 Hs.406050 NM_003462 ENSG00000163879 DNALI1 P28|dJ423B22.5|hp28 dynein axonemal light intermediate chain 1 protein-coding chr18-251 chr18 10140978 10141188 + 18.6 0.000 Intergenic Intergenic 227067 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chrX-352 chrX 55778440 55778650 + 18.6 0.000 Intergenic Intergenic 60796 NM_016656 10325 Hs.50282 NM_006064 ENSG00000083750 RRAGB RAGB|bA465E19.1 Ras related GTP binding B protein-coding chr2-1511 chr2 36965850 36966060 + 18.6 0.000 intron (NM_003162, intron 1 of 17) intron (NM_003162, intron 1 of 17) 581 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr12-1105 chr12 454529 454739 + 18.6 0.000 Intergenic Intergenic -5305 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr3-529 chr3 184332541 184332751 + 18.6 0.000 intron (NM_198244, intron 29 of 29) intron (NM_198244, intron 29 of 29) -3280 NM_001366134 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr3-1779 chr3 12644308 12644518 + 18.6 0.000 intron (NM_001354691, intron 1 of 16) intron (NM_001354691, intron 1 of 16) 19095 NM_001354690 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr14-416 chr14 56244408 56244618 + 18.6 0.000 intron (NM_021255, intron 2 of 5) Charlie25|DNA|hAT-Charlie 126102 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr1-857 chr1 35883050 35883260 + 18.6 0.000 promoter-TSS (NM_012199) promoter-TSS (NM_012199) -40 NM_001317122 26523 Hs.22867 NM_012199 ENSG00000092847 AGO1 EIF2C|EIF2C1|GERP95|Q99|hAgo1 argonaute RISC component 1 protein-coding chr9-552 chr9 128916283 128916493 + 18.6 0.000 3' UTR (NM_019594, exon 4 of 4) 3' UTR (NM_019594, exon 4 of 4) -4594 NM_001100876 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr2-2200 chr2 64770876 64771086 + 18.6 0.000 Intergenic Intergenic 92650 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr13-91 chr13 20902589 20902799 + 18.6 0.000 promoter-TSS (NM_022459) promoter-TSS (NM_022459) 80 NM_022459 64328 Hs.507452 NM_022459 ENSG00000132953 XPO4 exp4 exportin 4 protein-coding chr1-1852 chr1 32273352 32273562 + 18.6 0.000 promoter-TSS (NM_001042771) promoter-TSS (NM_001042771) -654 NM_001042771 3932 Hs.470627 NM_005356 ENSG00000182866 LCK IMD22|LSK|YT16|p56lck|pp58lck LCK proto-oncogene, Src family tyrosine kinase protein-coding chr11-1295 chr11 1744056 1744266 + 18.6 0.000 intron (NM_001170820, intron 2 of 2) intron (NM_001170820, intron 2 of 2) 6434 NM_001170820 402778 Hs.121575 NM_001170820 ENSG00000244242 IFITM10 DSPA3 interferon induced transmembrane protein 10 protein-coding chr10-1029 chr10 109977374 109977584 + 18.6 0.000 intron (NR_038943, intron 2 of 4) intron (NR_038943, intron 2 of 4) -18894 NM_001320591 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr5-2274 chr5 36515398 36515608 + 18.6 0.000 Intergenic LTR16B2|LTR|ERVL -90852 NM_001289939 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr16-859 chr16 86951909 86952119 + 18.6 0.000 Intergenic Intergenic -105770 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr5-629 chr5 147509866 147510076 + 18.6 0.000 promoter-TSS (NM_001197294) promoter-TSS (NM_001197294) 97 NM_001197294 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr3-913 chr3 12990965 12991175 + 18.6 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -3969 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr10-921 chr10 103448753 103448963 + 18.6 0.000 intron (NR_024552, intron 3 of 3) intron (NR_024552, intron 3 of 3) 3512 NR_046344 51063 Hs.241545 NM_015916 ENSG00000138172 CALHM2 FAM26B calcium homeostasis modulator family member 2 protein-coding chr9-774 chr9 133558788 133558998 + 18.6 0.000 intron (NM_001145320, intron 11 of 18) intron (NM_001145320, intron 11 of 18) 21353 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr12-743 chr12 3117665 3117875 + 18.6 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 40391 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr1-1762 chr1 2284646 2284856 + 18.6 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 56432 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr15-573 chr15 98853258 98853468 + 18.6 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 68937 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr11-1080 chr11 113875362 113875572 + 18.6 0.000 exon (NM_001346252, exon 1 of 26) exon (NM_001346252, exon 1 of 26) 105 NM_001346267 57646 Hs.503891 NM_020886 ENSG00000048028 USP28 - ubiquitin specific peptidase 28 protein-coding chr5-544 chr5 175478693 175478903 + 18.6 0.000 intron (NM_001322982, intron 1 of 10) CpG 238 NM_022754 94081 Hs.369440 NM_022754 ENSG00000164466 SFXN1 SLC56A1|TCC sideroflexin 1 protein-coding chr11-1401 chr11 9150642 9150852 + 18.6 0.000 exon (NM_015213, exon 14 of 23) exon (NM_015213, exon 14 of 23) 56384 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr3-411 chr3 196317734 196317944 + 18.6 0.000 promoter-TSS (NR_121665) promoter-TSS (NR_121665) 401 NM_001351628 255758 Hs.733180 NM_152773 ENSG00000213123 TCTEX1D2 SRTD17 Tctex1 domain containing 2 protein-coding chr9-889 chr9 127846588 127846798 + 18.6 0.000 intron (NM_001114753, intron 1 of 14) intron (NM_001114753, intron 1 of 14) 474 NM_001278138 2022 Hs.76753 NM_000118 ENSG00000106991 ENG END|HHT1|ORW1 endoglin protein-coding chr14-604 chr14 42193248 42193458 + 18.6 0.000 Intergenic Intergenic 586497 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr14-1350 chr14 96790735 96790945 + 18.6 0.000 TTS (NR_146552) TTS (NR_146552) -6542 NM_003384 7443 Hs.422662 NM_003384 ENSG00000100749 VRK1 PCH1|PCH1A VRK serine/threonine kinase 1 protein-coding chr2-1694 chr2 160747762 160747972 + 18.6 0.000 Intergenic LFSINE_Vert|SINE|tRNA -254060 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr2-1183 chr2 54212545 54212755 + 18.6 0.000 intron (NM_138448, intron 3 of 3) intron (NM_138448, intron 3 of 3) 43579 NM_001003937 388951 Hs.620508 NM_001003937 ENSG00000178021 TSPYL6 - TSPY like 6 protein-coding chr16-886 chr16 85372908 85373118 + 18.6 0.000 Intergenic Intergenic -66688 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr2-1139 chr2 67389426 67389636 + 18.6 0.000 Intergenic Intergenic -7802 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr1-2350 chr1 25042235 25042445 + 18.6 0.000 Intergenic MER52A|LTR|ERV1 18837 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr2-1104 chr2 108189375 108189585 + 18.6 0.000 intron (NR_131251, intron 1 of 4) LTR3B_|LTR|ERVK 28361 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA chr7-1514 chr7 15801692 15801902 + 18.6 0.000 Intergenic Intergenic 113419 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr15-278 chr15 44537600 44537810 + 18.6 0.000 promoter-TSS (NR_034171) promoter-TSS (NR_034171) 558 NM_003758 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr11-1654 chr11 132111938 132112148 + 18.6 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) -172259 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr10-1053 chr10 92405487 92405697 + 18.6 0.000 Intergenic Intergenic -13069 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - microtubule affinity regulating kinase 2 pseudogene 9 pseudo chr12-1134 chr12 77848188 77848398 + 18.6 0.000 intron (NM_001024383, intron 1 of 39) intron (NM_001024383, intron 1 of 39) 17399 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr15-922 chr15 68536405 68536615 + 18.6 0.000 intron (NM_001324014, intron 2 of 12) intron (NM_001324014, intron 2 of 12) 18137 NM_001324014 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr2-1447 chr2 239359242 239359452 + 18.6 0.000 intron (NM_006037, intron 1 of 26) intron (NM_006037, intron 1 of 26) -7543 NR_039948 100616360 NR_039948 ENSG00000264292 MIR2467 mir-2467 microRNA 2467 ncRNA chr13-363 chr13 45162864 45163074 + 18.6 0.000 intron (NM_004128, intron 4 of 7) L1ME3Cz|LINE|L1 38076 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr5-996 chr5 66144643 66144853 + 18.6 0.000 promoter-TSS (NM_139168) promoter-TSS (NM_139168) -87 NM_139168 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding chr3-706 chr3 127984780 127984990 + 18.6 0.000 3' UTR (NM_207335, exon 6 of 6) 3' UTR (NM_207335, exon 6 of 6) -67552 NM_013336 29927 Hs.518236 NM_013336 ENSG00000058262 SEC61A1 HNFJ4|HSEC61|SEC61|SEC61A SEC61 translocon alpha 1 subunit protein-coding chr11-1974 chr11 12673890 12674100 + 18.6 0.000 promoter-TSS (NM_021961) promoter-TSS (NM_021961) -426 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr12-543 chr12 93591601 93591811 + 18.6 0.000 Intergenic Intergenic 19031 NM_001270471 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr2-2006 chr2 65075807 65076017 + 18.6 0.000 intron (NR_134966, intron 4 of 5) intron (NR_134966, intron 4 of 5) 19496 NM_015147 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr18-301 chr18 8471274 8471484 + 18.6 0.000 Intergenic Intergenic -104345 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr16-864 chr16 668810 669020 + 18.6 0.000 intron (NR_147953, intron 4 of 16) CpG 783 NM_001352289 89941 Hs.513242 NM_138769 ENSG00000140983 RHOT2 ARHT2|C16orf39|MIRO-2|MIRO2|RASL ras homolog family member T2 protein-coding chr22-372 chr22 21867514 21867724 + 18.6 0.000 promoter-TSS (NM_138957) promoter-TSS (NM_138957) 61 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr15-470 chr15 71588845 71589055 + 18.6 0.000 intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 41714 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr11-1459 chr11 78365475 78365685 + 18.6 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) -23700 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chrX-163 chrX 2804966 2805176 + 18.6 0.000 intron (NM_001141920, intron 7 of 9) intron (NM_001141920, intron 7 of 9) -23751 NM_001184703 8908 Hs.567381 NM_003918 ENSG00000056998 GYG2 GN-2|GN2 glycogenin 2 protein-coding chr5-2294 chr5 53362524 53362734 + 18.6 0.000 Intergenic Intergenic -118000 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr7-1187 chr7 44477479 44477689 + 18.6 0.000 intron (NM_015332, intron 2 of 5) intron (NM_015332, intron 2 of 5) 13074 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr1-1141 chr1 225428131 225428341 + 18.6 0.000 promoter-TSS (NM_002296) promoter-TSS (NM_002296) -198 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr7-509 chr7 6483227 6483437 + 18.6 0.000 intron (NM_001100603, intron 1 of 3) intron (NM_001100603, intron 1 of 3) 820 NM_001100603 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr8-680 chr8 98944205 98944415 + 18.6 0.000 promoter-TSS (NM_001286841) promoter-TSS (NM_001286841) -93 NM_001286841 116039 Hs.253247 NM_053001 ENSG00000164920 OSR2 - odd-skipped related transciption factor 2 protein-coding chr5-261 chr5 53109740 53109950 + 18.6 0.000 promoter-TSS (NM_176806) promoter-TSS (NM_176806) 3 NR_104654 257396 Hs.12326 NR_034107 ENSG00000247796 LOC257396 - uncharacterized LOC257396 ncRNA chr1-2515 chr1 220370246 220370456 + 18.6 0.000 Intergenic Intergenic -97898 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr2-2380 chr2 6655380 6655590 + 18.6 0.000 Intergenic MIRc|SINE|MIR -4966 NR_110497 102800314 Hs.258100 NR_110497 ENSG00000236172 MIR7515HG - MIR7515 host gene ncRNA chr6-1269 chr6 56528441 56528651 + 18.6 0.000 intron (NM_001144770, intron 59 of 94) intron (NM_001144770, intron 59 of 94) 114343 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chrX-455 chrX 119763238 119763448 + 18.6 0.000 Intergenic Intergenic 4755 NM_001105576 347454 Hs.355223 NM_001105576 ENSG00000187808 SOWAHD ANKRD58 sosondowah ankyrin repeat domain family member D protein-coding chr6-1083 chr6 52820190 52820400 + 18.6 0.000 Intergenic Intergenic -16479 NM_145740 2938 Hs.446309 NM_145740 ENSG00000243955 GSTA1 GST-epsilon|GST2|GSTA1-1|GTH1 glutathione S-transferase alpha 1 protein-coding chr17-1833 chr17 8649732 8649942 + 18.6 0.000 Intergenic Intergenic -19076 NM_001256095 4628 Hs.16355 NM_005964 ENSG00000133026 MYH10 NMMHC-IIB|NMMHCB myosin heavy chain 10 protein-coding chr11-1065 chr11 66348159 66348369 + 18.6 0.000 promoter-TSS (NM_006876) promoter-TSS (NM_006876) 273 NR_135761 102724064 Hs.614641 NR_135761 ENSG00000255468 LOC102724064 - uncharacterized LOC102724064 ncRNA chr9-883 chr9 105157284 105157494 + 18.6 0.000 Intergenic Intergenic -87216 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr1-2294 chr1 21673011 21673221 + 18.6 0.000 Intergenic Intergenic -3759 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr12-703 chr12 56157812 56158022 + 18.6 0.000 promoter-TSS (NM_079423) promoter-TSS (NM_079423) -442 NM_079423 4637 Hs.632717 NM_021019 ENSG00000092841 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin light chain 6 protein-coding chr1-1879 chr1 148372351 148372561 + 18.6 0.000 Intergenic LTR51|LTR|ERV1 -9923 NR_104082 101954273 NR_104082 ENSG00000207340 RNVU1-1 RNU1-10P|RNU1-53|RNU1P10|RNVU1-10|U1.4|U1P14|vU1.1|vU1.10 RNA, variant U1 small nuclear 1 snRNA chr2-2107 chr2 12857117 12857327 + 18.6 0.000 Intergenic Intergenic 119855 NR_036072 100422986 NR_036072 ENSG00000264370 MIR3125 mir-3125 microRNA 3125 ncRNA chr2-525 chr2 43637226 43637436 + 18.6 0.000 promoter-TSS (NM_172069) promoter-TSS (NM_172069) 71 NM_172069 130271 Hs.164162 NM_172069 ENSG00000152527 PLEKHH2 PLEKHH1L pleckstrin homology, MyTH4 and FERM domain containing H2 protein-coding chr13-253 chr13 108215591 108215801 + 18.6 0.000 promoter-TSS (NM_002312) promoter-TSS (NM_002312) -160 NM_206937 3981 Hs.166091 NM_002312 ENSG00000174405 LIG4 LIG4S DNA ligase 4 protein-coding chr3-1577 chr3 65905831 65906041 + 18.6 0.000 intron (NR_145422, intron 1 of 2) intron (NR_145422, intron 1 of 2) 12120 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr7-1214 chr7 86932269 86932479 + 18.6 0.000 intron (NM_001291991, intron 7 of 20) intron (NM_001291991, intron 7 of 20) 33525 NM_152748 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr5-706 chr5 66959255 66959465 + 18.6 0.000 intron (NM_001290226, intron 1 of 26) intron (NM_001290226, intron 1 of 26) 287 NM_001290226 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr4-1420 chr4 38565461 38565671 + 18.6 0.000 intron (NR_146991, intron 1 of 2) intron (NR_146991, intron 1 of 2) 1563 NR_146991 105374411 NR_146991 LINC02278 - long intergenic non-protein coding RNA 2278 ncRNA chr10-471 chr10 68332722 68332932 + 18.6 0.000 promoter-TSS (NM_001322449) promoter-TSS (NM_001322449) 14 NM_001322441 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding chr17-792 chr17 17818133 17818343 + 18.6 0.000 intron (NM_001005291, intron 7 of 19) intron (NM_001005291, intron 7 of 19) -4307 NR_030361 693120 NR_030361 ENSG00000207839 MIR33B MIRN33B|hsa-mir-33b|mir-33b microRNA 33b ncRNA chr12-532 chr12 124295260 124295470 + 18.6 0.000 5' UTR (NM_001365156, exon 1 of 3) 5' UTR (NM_001365156, exon 1 of 3) 272 NM_001365156 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr18-234 chr18 39841637 39841847 + 18.6 0.000 promoter-TSS (NR_151703) promoter-TSS (NR_151703) 33 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr2-1160 chr2 172504018 172504228 + 18.6 0.000 exon (NM_001365529, exon 25 of 25) exon (NM_001365529, exon 25 of 25) -38101 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr17-1522 chr17 64927432 64927642 + 18.6 0.000 Intergenic Intergenic -8046 NM_199340 374819 Hs.551962 NM_199340 ENSG00000176809 LRRC37A3 LRRC37|LRRC37A leucine rich repeat containing 37 member A3 protein-coding chr6-698 chr6 41706246 41706456 + 18.6 0.000 intron (NM_001167827, intron 1 of 8) intron (NM_001167827, intron 1 of 8) 27259 NR_162107 113218489 NR_162107 MIR10398 - microRNA 10398 ncRNA chr3-1862 chr3 117753035 117753245 + 18.6 0.000 Intergenic Intergenic -62215 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr20-451 chr20 38426111 38426321 + 18.6 0.000 promoter-TSS (NR_002910) promoter-TSS (NR_002910) -886 NR_002910 26776 Hs.400876 NR_002910 ENSG00000235408 SNORA71B RNU71B|U71b small nucleolar RNA, H/ACA box 71B snoRNA chr13-327 chr13 49247959 49248169 + 18.6 0.000 promoter-TSS (NR_135318) promoter-TSS (NR_135318) 139 NM_030911 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr1-1472 chr1 54499528 54499738 + 18.6 0.000 Intergenic CpG -48595 NM_015547 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr7-1266 chr7 80640835 80641045 + 18.6 0.000 intron (NM_001371079, intron 1 of 13) intron (NM_001371079, intron 1 of 13) 2298 NM_001371079 chr6-975 chr6 112626796 112627006 + 18.6 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 279571 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chrX-584 chrX 102995481 102995691 + 18.6 0.000 Intergenic Intergenic 58314 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr12-1513 chr12 57217665 57217875 + 18.6 0.000 intron (NM_007224, intron 1 of 1) intron (NM_007224, intron 1 of 1) 976 NM_007224 11247 Hs.745023 NM_007224 ENSG00000182379 NXPH4 NPH4 neurexophilin 4 protein-coding chr15-368 chr15 64503023 64503233 + 18.6 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 3708 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr7-1340 chr7 29723267 29723477 + 18.6 0.000 intron (NR_158194, intron 5 of 8) intron (NR_158194, intron 5 of 8) -37551 NR_027347 100271874 Hs.729709 NR_027347 ZNRF2P2 - zinc and ring finger 2 pseudogene 2 pseudo chr21-195 chr21 26389942 26390152 + 18.6 0.000 Intergenic Intergenic -3588 NR_135516 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chr6-434 chr6 121334573 121334783 + 18.6 0.000 promoter-TSS (NM_152730) promoter-TSS (NM_152730) 51 NM_001367759 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr19-852 chr19 14474850 14475060 + 18.6 0.000 intron (NM_000955, intron 1 of 2) intron (NM_000955, intron 1 of 2) 399 NM_000955 5731 Hs.159360 NM_000955 ENSG00000160951 PTGER1 EP1 prostaglandin E receptor 1 protein-coding chr3-1866 chr3 123605300 123605510 + 18.6 0.000 intron (NR_121654, intron 2 of 3) Tigger13a|DNA|TcMar-Tigger 15143 NM_053032 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr3-327 chr3 51499725 51499935 + 18.6 0.000 intron (NM_001349169, intron 1 of 25) CpG 172 NM_001171904 9730 Hs.716623 NM_014703 ENSG00000145041 DCAF1 RIP|VPRBP DDB1 and CUL4 associated factor 1 protein-coding chr9-466 chr9 35646798 35647008 + 18.6 0.000 non-coding (NR_135130, exon 2 of 2) non-coding (NR_135130, exon 2 of 2) 633 NR_135130 101926948 Hs.639412 NR_135130 LOC101926948 - uncharacterized LOC101926948 ncRNA chr18-220 chr18 13611749 13611959 + 18.6 0.000 promoter-TSS (NM_001276249) promoter-TSS (NM_001276249) 90 NM_001276249 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr6-1005 chr6 21753456 21753666 + 18.6 0.000 intron (NR_015410, intron 2 of 11) intron (NR_015410, intron 2 of 11) 87148 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr19-765 chr19 48812248 48812458 + 18.6 0.000 TTS (NM_016246) TTS (NM_016246) -1324 NM_001284325 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr9-753 chr9 84170976 84171186 + 18.6 0.000 Intergenic Intergenic 107638 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr20-540 chr20 48897416 48897626 + 18.6 0.000 Intergenic L1MB7|LINE|L1 -24190 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr6-2105 chr6 160076993 160077203 + 18.6 0.000 intron (NM_000876, intron 36 of 47) intron (NM_000876, intron 36 of 47) -15984 NR_003288 729603 Hs.674810 NR_003288 ENSG00000213073 LOC729603 - calcineurin like EF-hand protein 1 pseudogene pseudo chr9-1227 chr9 133831476 133831686 + 18.6 0.000 intron (NM_001134398, intron 4 of 29) intron (NM_001134398, intron 4 of 29) -91626 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr4-411 chr4 7876243 7876453 + 18.6 0.000 intron (NM_198595, intron 1 of 16) MLT1O|LTR|ERVL-MaLR -4040 NM_001371090 chr9-1043 chr9 134746215 134746425 + 18.6 0.000 intron (NM_001278074, intron 11 of 65) intron (NM_001278074, intron 11 of 65) -93477 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr11-2402 chr11 3944503 3944713 + 18.6 0.000 intron (NM_001277962, intron 1 of 12) MIRc|SINE|MIR 88546 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr6-1458 chr6 8108253 8108463 + 18.6 0.000 Intergenic Intergenic -5763 NR_037618 100526837 Hs.719272 NR_037618 EEF1E1-BLOC1S5 EEF1E1-MUTED EEF1E1-BLOC1S5 readthrough (NMD candidate) ncRNA chr2-1504 chr2 19649781 19649991 + 18.6 0.000 Intergenic Intergenic -218968 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr3-1370 chr3 47661309 47661519 + 18.6 0.000 TTS (NR_145791) TTS (NR_145791) 280 NR_145791 109623484 NR_145791 SNORD146 - small nucleolar RNA, C/D box 146 snoRNA chr19-816 chr19 47608086 47608296 + 18.6 0.000 promoter-TSS (NM_015711) promoter-TSS (NM_015711) -5 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr18-309 chr18 49249662 49249872 + 18.6 0.000 intron (NM_001353214, intron 13 of 17) intron (NM_001353214, intron 13 of 17) -199999 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr18-215 chr18 80010266 80010476 + 18.6 0.000 intron (NM_001305564, intron 1 of 2) LTR25|LTR|ERV1 -21808 NR_131177 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding chr18-303 chr18 23703095 23703305 + 18.6 0.000 intron (NM_001127717, intron 1 of 73) MER5A|DNA|hAT-Charlie 13747 NM_001127717 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr11-1668 chr11 11391897 11392107 + 18.6 0.000 intron (NM_001363464, intron 3 of 9) intron (NM_001363464, intron 3 of 9) -38752 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr10-588 chr10 75210084 75210294 + 18.6 0.000 promoter-TSS (NM_001184823) promoter-TSS (NM_001184823) 35 NM_001324090 7417 Hs.355927 NM_003375 ENSG00000165637 VDAC2 POR voltage dependent anion channel 2 protein-coding chr5-975 chr5 6413095 6413305 + 18.6 0.000 Intergenic Intergenic -34653 NM_032286 84246 Hs.13885 NM_032286 ENSG00000133398 MED10 L6|NUT2|TRG20 mediator complex subunit 10 protein-coding chr6-615 chr6 11094602 11094812 + 18.6 0.000 intron (NM_001135575, intron 1 of 1) intron (NM_001135575, intron 1 of 1) 873 NM_001135575 221710 Hs.656600 NM_001135575 ENSG00000224531 SMIM13 C6orf228 small integral membrane protein 13 protein-coding chr1-2033 chr1 180773525 180773735 + 18.6 0.000 intron (NR_137330, intron 2 of 12) intron (NR_137330, intron 2 of 12) -139267 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr8-917 chr8 132947371 132947581 + 18.6 0.000 intron (NM_003235, intron 26 of 47) intron (NM_003235, intron 26 of 47) 80518 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr20-516 chr20 11716237 11716447 + 18.6 0.000 Intergenic LTR16A1|LTR|ERVL 154373 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr4-552 chr4 41935170 41935380 + 18.6 0.000 promoter-TSS (NM_018126) promoter-TSS (NM_018126) -154 NM_018126 55161 Hs.31082 NM_018126 ENSG00000109133 TMEM33 1600019D15Rik|Pom33|SHINC-3|SHINC3 transmembrane protein 33 protein-coding chr5-388 chr5 91383407 91383617 + 18.6 0.000 promoter-TSS (NM_020801) promoter-TSS (NM_020801) -195 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr10-331 chr10 6144612 6144822 + 18.6 0.000 promoter-TSS (NM_001145443) promoter-TSS (NM_001145443) -204 NM_001145443 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr3-2131 chr3 89344142 89344352 + 18.6 0.000 intron (NM_182644, intron 5 of 6) intron (NM_182644, intron 5 of 6) 236626 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr9-1017 chr9 111599424 111599634 + 18.6 0.000 promoter-TSS (NM_012212) promoter-TSS (NM_012212) -98 NM_012212 22949 Hs.584864 NM_012212 ENSG00000106853 PTGR1 LTB4DH|PGR1|ZADH3 prostaglandin reductase 1 protein-coding chr1-2183 chr1 45361059 45361269 + 18.6 0.000 intron (NM_007170, intron 4 of 10) intron (NM_007170, intron 4 of 10) -20694 NR_146882 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr10-172 chr10 133373328 133373538 + 18.6 0.000 promoter-TSS (NM_004092) promoter-TSS (NM_004092) -79 NM_004092 1892 Hs.76394 NM_004092 ENSG00000127884 ECHS1 ECHS1D|SCEH enoyl-CoA hydratase, short chain 1 protein-coding chr2-895 chr2 101973208 101973418 + 18.6 0.000 Intergenic Intergenic -10152 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr1-2145 chr1 8412306 8412516 + 18.6 0.000 intron (NM_001042681, intron 12 of 22) intron (NM_001042681, intron 12 of 22) 11421 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr11-1246 chr11 81655461 81655671 + 18.6 0.000 Intergenic L1PA17|LINE|L1 235270 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr8-745 chr8 42051026 42051236 + 18.6 0.000 promoter-TSS (NR_136589) promoter-TSS (NR_136589) -619 NR_136589 105379393 Hs.742878 NR_136589 LOC105379393 - uncharacterized LOC105379393 ncRNA chr16-392 chr16 84247485 84247695 + 18.6 0.000 Intergenic AluSz|SINE|Alu -7840 NM_172347 93107 Hs.335877 NM_133490 ENSG00000168418 KCNG4 KV6.3|KV6.4 potassium voltage-gated channel modifier subfamily G member 4 protein-coding chr1-2962 chr1 113542240 113542450 + 18.5 0.000 intron (NM_001142782, intron 1 of 20) MER44B|DNA|TcMar-Tigger 151830 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr5-1005 chr5 87127678 87127888 + 18.5 0.000 intron (NR_105018, intron 1 of 3) intron (NR_105018, intron 1 of 3) 7635 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr15-295 chr15 66356528 66356738 + 18.5 0.000 promoter-TSS (NM_017858) promoter-TSS (NM_017858) 52 NM_017858 54962 Hs.744308 NM_017858 ENSG00000075131 TIPIN - TIMELESS interacting protein protein-coding chr1-781 chr1 11681055 11681265 + 18.5 0.000 promoter-TSS (NM_006341) promoter-TSS (NM_006341) -12 NM_006341 10459 Hs.19400 NM_006341 ENSG00000116670 MAD2L2 FANCV|MAD2B|POLZ2|REV7 mitotic arrest deficient 2 like 2 protein-coding chr12-1041 chr12 67772886 67773096 + 18.5 0.000 Intergenic Intergenic -43516 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr16-552 chr16 4847162 4847372 + 18.5 0.000 promoter-TSS (NM_032569) promoter-TSS (NM_032569) 21 NR_136695 84656 Hs.387255 NM_032569 ENSG00000140632 GLYR1 BM045|HIBDL|N-PAC|NP60 glyoxylate reductase 1 homolog protein-coding chr16-1747 chr16 84371888 84372098 + 18.5 0.000 intron (NM_014861, intron 1 of 26) intron (NM_014861, intron 1 of 26) 3470 NM_014861 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr1-1221 chr1 9239758 9239968 + 18.5 0.000 promoter-TSS (NM_001282587) promoter-TSS (NM_001282587) 16 NM_001282587 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr6-591 chr6 683867 684077 + 18.5 0.000 intron (NR_073064, intron 2 of 29) intron (NR_073064, intron 2 of 29) 9167 NM_018303 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr16-562 chr16 84819893 84820103 + 18.5 0.000 promoter-TSS (NM_031476) promoter-TSS (NM_031476) 13 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr7-2506 chr7 33495354 33495564 + 18.5 0.000 intron (NM_001348037, intron 18 of 20) intron (NM_001348037, intron 18 of 20) 365895 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr8-660 chr8 22453835 22454045 + 18.5 0.000 intron (NM_005605, intron 1 of 13) Tigger3b|DNA|TcMar-Tigger 12970 NM_001243975 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr15-451 chr15 87816103 87816313 + 18.5 0.000 Intergenic Intergenic 130060 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr9-1682 chr9 84791604 84791814 + 18.5 0.000 intron (NM_001369547, intron 13 of 13) intron (NM_001369547, intron 13 of 13) 85808 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr5-428 chr5 151080884 151081094 + 18.5 0.000 promoter-TSS (NM_006058) promoter-TSS (NM_006058) 45 NM_001258454 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr17-692 chr17 66540174 66540384 + 18.5 0.000 intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -123425 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr21-102 chr21 43776064 43776274 + 18.5 0.000 intron (NM_000100, intron 1 of 2) CpG 206 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr17-1543 chr17 82012785 82012995 + 18.5 0.000 intron (NR_045351, intron 11 of 14) intron (NR_045351, intron 11 of 14) 9988 NM_001271006 201254 Hs.37616 NM_144998 ENSG00000169689 CENPX CENP-X|D9|FAAP10|MHF2|STRA13 centromere protein X protein-coding chr7-566 chr7 148540281 148540491 + 18.5 0.000 Intergenic Intergenic -50380 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr7-1473 chr7 108004516 108004726 + 18.5 0.000 Intergenic Intergenic -1460 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr15-683 chr15 90665669 90665879 + 18.5 0.000 TTS (NR_120371) TTS (NR_120371) 5540 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr6-1242 chr6 160132865 160133075 + 18.5 0.000 intron (NM_153187, intron 3 of 9) intron (NM_153187, intron 3 of 9) 11139 NM_153187 6580 Hs.117367 NM_003057 ENSG00000175003 SLC22A1 HOCT1|OCT1|oct1_cds solute carrier family 22 member 1 protein-coding chr9-1323 chr9 12860010 12860220 + 18.5 0.000 Intergenic Intergenic -45726 NR_125775 101929467 Hs.586443 NR_125775 ENSG00000235448 LURAP1L-AS1 - LURAP1L antisense RNA 1 ncRNA chr7-1256 chr7 40033790 40034000 + 18.5 0.000 intron (NM_003718, intron 5 of 13) L1MC2|LINE|L1 83535 NM_031267 8621 Hs.233552 NM_003718 ENSG00000065883 CDK13 CDC2L|CDC2L5|CHDFIDD|CHED|hCDK13 cyclin dependent kinase 13 protein-coding chrX-216 chrX 134718433 134718643 + 18.5 0.000 intron (NM_001316887, intron 2 of 3) intron (NM_001316887, intron 2 of 3) 15098 NM_001316888 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr15-1064 chr15 75943107 75943317 + 18.5 0.000 TTS (NR_037623) TTS (NR_037623) 39334 NM_147188 26263 Hs.591115 NM_012170 ENSG00000167196 FBXO22 FBX22|FISTC1 F-box protein 22 protein-coding chr13-466 chr13 34044587 34044797 + 18.5 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 226543 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr8-754 chr8 86522613 86522823 + 18.5 0.000 intron (NM_003909, intron 2 of 16) intron (NM_003909, intron 2 of 16) 8283 NM_003909 8895 Hs.191219 NM_003909 ENSG00000085719 CPNE3 CPN3|PRO1071 copine 3 protein-coding chr4-1361 chr4 17817201 17817411 + 18.5 0.000 exon (NM_022346, exon 6 of 21) exon (NM_022346, exon 6 of 21) 6327 NR_073124 64151 Hs.567567 NM_022346 ENSG00000109805 NCAPG CAPG|CHCG|NY-MEL-3|YCG1 non-SMC condensin I complex subunit G protein-coding chr1-1904 chr1 203316609 203316819 + 18.5 0.000 Intergenic Intergenic 11195 NM_006763 7832 Hs.519162 NM_006763 ENSG00000159388 BTG2 APRO1|PC3|TIS21 BTG anti-proliferation factor 2 protein-coding chr8-794 chr8 104143700 104143910 + 18.5 0.000 intron (NM_001348498, intron 19 of 24) intron (NM_001348498, intron 19 of 24) -79530 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr7-1022 chr7 28358584 28358794 + 18.5 0.000 intron (NM_182899, intron 1 of 9) AmnSINE1|SINE|5S-Deu-L2 -53829 NM_182898 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr15-213 chr15 101724251 101724461 + 18.5 0.000 exon (NM_152334, exon 1 of 19) exon (NM_152334, exon 1 of 19) 117 NM_152334 123283 Hs.657163 NM_152334 ENSG00000185418 TARSL2 - threonyl-tRNA synthetase like 2 protein-coding chr5-1309 chr5 65262685 65262895 + 18.5 0.000 intron (NM_197941, intron 13 of 24) intron (NM_197941, intron 13 of 24) 219130 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr5-1103 chr5 169183609 169183819 + 18.5 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 79980 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr1-2266 chr1 209839927 209840137 + 18.5 0.000 intron (NM_014388, intron 7 of 11) L2b|LINE|L2 12060 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 UTP25 C1orf107|DEF|DIEXF|DJ434O14.5 UTP25 small subunit processor component protein-coding chr8-1212 chr8 97423995 97424205 + 18.5 0.000 intron (NR_125390, intron 1 of 2) intron (NR_125390, intron 1 of 2) 22397 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr11-1160 chr11 25982108 25982318 + 18.5 0.000 Intergenic MIR3|SINE|MIR -206910 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr5-1094 chr5 96247266 96247476 + 18.5 0.000 intron (NR_130776, intron 1 of 4) Tigger15a|DNA|TcMar-Tigger 168233 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr2-877 chr2 9638514 9638724 + 18.5 0.000 Intergenic (CAGGCT)n|Simple_repeat|Simple_repeat -7622 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr3-361 chr3 187139583 187139793 + 18.5 0.000 promoter-TSS (NM_052969) promoter-TSS (NM_052969) -192 NM_052969 116832 Hs.647900 NM_052969 ENSG00000163923 RPL39L L39-2|RPL39L1 ribosomal protein L39 like protein-coding chr9-1064 chr9 123784560 123784770 + 18.5 0.000 intron (NM_001352965, intron 1 of 20) intron (NM_001352965, intron 1 of 20) 145461 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr4-824 chr4 147060740 147060950 + 18.5 0.000 Intergenic Intergenic -114959 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr6-1157 chr6 14286064 14286274 + 18.5 0.000 promoter-TSS (NR_108096) promoter-TSS (NR_108096) -715 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr4-699 chr4 53365973 53366183 + 18.5 0.000 promoter-TSS (NM_152540) promoter-TSS (NM_152540) -17 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr19-1406 chr19 43759512 43759722 + 18.5 0.000 Intergenic Intergenic -4655 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr9-968 chr9 121298730 121298940 + 18.5 0.000 promoter-TSS (NM_001353077) promoter-TSS (NM_001353077) -601 NM_001353075 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr5-1487 chr5 111389460 111389670 + 18.5 0.000 intron (NM_001744, intron 4 of 10) intron (NM_001744, intron 4 of 10) -122661 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr3-2144 chr3 119711214 119711424 + 18.5 0.000 intron (NM_033364, intron 5 of 17) intron (NM_033364, intron 5 of 17) 8297 NM_001320318 89876 Hs.341906 NM_033364 ENSG00000183833 MAATS1 AAT1|AAT1alpha|C3orf15|CFAP91|CaM-IP2|SPATA26 MYCBP associated and testis expressed 1 protein-coding chr3-1226 chr3 106345613 106345823 + 18.5 0.000 Intergenic Intergenic -476317 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr14-1222 chr14 90903070 90903280 + 18.5 0.000 intron (NM_182398, intron 8 of 12) intron (NM_182398, intron 8 of 12) -86745 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr6-824 chr6 132932092 132932302 + 18.5 0.000 Intergenic Intergenic 114978 NR_002436 594839 Hs.671378 NR_002436 ENSG00000200534 SNORA33 ACA33 small nucleolar RNA, H/ACA box 33 snoRNA chr13-801 chr13 108957775 108957985 + 18.5 0.000 intron (NM_015011, intron 17 of 34) L2b|LINE|L2 209423 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr7-1100 chr7 28070077 28070287 + 18.5 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -110275 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr1-1728 chr1 59360199 59360409 + 18.5 0.000 intron (NM_001350794, intron 4 of 14) intron (NM_001350794, intron 4 of 14) 50272 NM_001350799 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr13-536 chr13 49401405 49401615 + 18.5 0.000 promoter-TSS (NM_030925) promoter-TSS (NM_030925) 32 NM_030925 81617 Hs.87159 NM_030925 ENSG00000102547 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39 like protein-coding chr15-437 chr15 40894212 40894422 + 18.5 0.000 promoter-TSS (NM_020857) promoter-TSS (NM_020857) -133 NM_020857 57617 Hs.23876 NM_020857 ENSG00000104142 VPS18 PEP3 VPS18 core subunit of CORVET and HOPS complexes protein-coding chr17-1011 chr17 12403067 12403277 + 18.5 0.000 Intergenic Intergenic -146796 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chr18-375 chr18 23303209 23303419 + 18.5 0.000 intron (NM_032933, intron 14 of 14) intron (NM_032933, intron 14 of 14) 134647 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr21-205 chr21 33204102 33204312 + 18.5 0.000 Intergenic Intergenic -25688 NM_207585 3455 Hs.708195 NM_000874 ENSG00000159110 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB|IMD45 interferon alpha and beta receptor subunit 2 protein-coding chr16-1101 chr16 85713852 85714062 + 18.5 0.000 intron (NR_161452, intron 2 of 4) MER77|LTR|ERVL -25003 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr16-1090 chr16 72985411 72985621 + 18.5 0.000 intron (NM_006885, intron 1 of 9) intron (NM_006885, intron 1 of 9) 62612 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr9-1695 chr9 95726908 95727118 + 18.5 0.000 Intergenic Intergenic -148678 NM_020207 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr6-527 chr6 15260202 15260412 + 18.5 0.000 intron (NM_001267040, intron 1 of 17) intron (NM_001267040, intron 1 of 17) 11452 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr2-1132 chr2 45681729 45681939 + 18.5 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 30159 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr18-335 chr18 46469709 46469919 + 18.5 0.000 Intergenic Intergenic 49272 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr4-1162 chr4 161936524 161936734 + 18.5 0.000 intron (NM_001128428, intron 3 of 14) HAL1|LINE|L1 -86104 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr1-2687 chr1 205144933 205145143 + 18.5 0.000 3' UTR (NM_015375, exon 13 of 13) 3' UTR (NM_015375, exon 13 of 13) -23060 NM_005057 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr4-696 chr4 40551137 40551347 + 18.5 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) -35257 NM_019027 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr6-565 chr6 979389 979599 + 18.5 0.000 intron (NR_027116, intron 2 of 3) L1PB1|LINE|L1 110996 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr18-504 chr18 26481025 26481235 + 18.5 0.000 intron (NM_001258221, intron 2 of 4) L2a|LINE|L2 58135 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr20-221 chr20 32762340 32762550 + 18.5 0.000 promoter-TSS (NM_001207056) promoter-TSS (NM_001207056) 60 NM_006892 1789 Hs.643024 NM_006892 ENSG00000088305 DNMT3B ICF|ICF1|M.HsaIIIB DNA methyltransferase 3 beta protein-coding chr9-783 chr9 88746513 88746723 + 18.5 0.000 promoter-TSS (NR_036252) promoter-TSS (NR_036252) -713 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr2-1339 chr2 144553531 144553741 + 18.5 0.000 intron (NR_110570, intron 1 of 2) intron (NR_110570, intron 1 of 2) -29192 NR_136320 105373656 Hs.734683 NR_136320 LOC105373656 - uncharacterized LOC105373656 ncRNA chr4-795 chr4 22179157 22179367 + 18.5 0.000 Intergenic Intergenic 160404 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr2-1950 chr2 231296992 231297202 + 18.5 0.000 intron (NM_001352759, intron 19 of 19) intron (NM_001352759, intron 19 of 19) -65611 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr18-530 chr18 74895787 74895997 + 18.5 0.000 intron (NM_017757, intron 6 of 7) intron (NM_017757, intron 6 of 7) 264929 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr17-1034 chr17 62778991 62779201 + 18.5 0.000 intron (NM_001288780, intron 4 of 10) intron (NM_001288780, intron 4 of 10) 27544 NM_001100875 162333 Hs.665663 NM_152598 ENSG00000173838 MARCH10 MARCH-X|RNF190 membrane associated ring-CH-type finger 10 protein-coding chr16-838 chr16 87436218 87436428 + 18.5 0.000 intron (NM_015144, intron 2 of 12) intron (NM_015144, intron 2 of 12) 43987 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr10-913 chr10 77582835 77583045 + 18.5 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 54868 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr4-1260 chr4 17448754 17448964 + 18.5 0.000 Intergenic MER57B1|LTR|ERV1 63231 NM_000320 5860 Hs.75438 NM_000320 ENSG00000151552 QDPR DHPR|HDHPR|PKU2|SDR33C1 quinoid dihydropteridine reductase protein-coding chr17-1831 chr17 8173811 8174021 + 18.5 0.000 promoter-TSS (NR_033294) promoter-TSS (NR_033294) -328 NR_033294 727676 NR_033294 ENSG00000200463 SNORD118 LCC|U8 small nucleolar RNA, C/D box 118 snoRNA chr22-909 chr22 28710584 28710794 + 18.5 0.000 intron (NM_001257387, intron 7 of 15) intron (NM_001257387, intron 7 of 15) -30824 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding chr3-525 chr3 169773413 169773623 + 18.5 0.000 promoter-TSS (NM_001185119) promoter-TSS (NM_001185119) 122 NM_018657 55892 Hs.507025 NM_018657 ENSG00000085274 MYNN OSZF|SBBIZ1|ZBTB31|ZNF902 myoneurin protein-coding chr17-1231 chr17 68543617 68543827 + 18.5 0.000 intron (NM_017565, intron 4 of 10) intron (NM_017565, intron 4 of 10) 14705 NR_027751 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding chr11-969 chr11 12163416 12163626 + 18.5 0.000 promoter-TSS (NR_106739) promoter-TSS (NR_106739) -162 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr10-2061 chr10 97617167 97617377 + 18.5 0.000 exon (NM_001098831, exon 3 of 5) exon (NM_001098831, exon 3 of 5) 16228 NM_178832 118812 Hs.217409 NM_178832 ENSG00000171160 MORN4 C10orf83|UTA|bA548K23.4|rtp MORN repeat containing 4 protein-coding chr17-851 chr17 38967332 38967542 + 18.5 0.000 promoter-TSS (NM_001008777) promoter-TSS (NM_001008777) -34 NM_001008777 494188 Hs.549536 NM_001008777 ENSG00000204952 FBXO47 - F-box protein 47 protein-coding chr15-492 chr15 45198597 45198807 + 18.5 0.000 intron (NM_138356, intron 2 of 7) intron (NM_138356, intron 2 of 7) 2414 NM_138356 90525 Hs.310399 NM_138356 ENSG00000138606 SHF - Src homology 2 domain containing F protein-coding chr14-504 chr14 53458355 53458565 + 18.5 0.000 Intergenic Intergenic 305106 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr22-649 chr22 36146115 36146325 + 18.5 0.000 intron (NM_145642, intron 2 of 3) MLT1B|LTR|ERVL-MaLR 14535 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr9-822 chr9 94140071 94140281 + 18.5 0.000 Intergenic Intergenic -35781 NR_029476 406881 NR_029476 ENSG00000199165 MIRLET7A1 LET7A1|MIRNLET7A1|let-7a-1 microRNA let-7a-1 ncRNA chr16-876 chr16 56245368 56245578 + 18.5 0.000 promoter-TSS (NR_037499) promoter-TSS (NR_037499) -47 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr1-2584 chr1 42157808 42158018 + 18.5 0.000 Intergenic Intergenic 4503 NM_007102 2981 Hs.32966 NM_007102 ENSG00000044012 GUCA2B GCAP-II|UGN guanylate cyclase activator 2B protein-coding chr17-1063 chr17 63356416 63356626 + 18.5 0.000 intron (NM_025185, intron 13 of 25) intron (NM_025185, intron 13 of 25) 83746 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr7-1416 chr7 30062661 30062871 + 18.5 0.000 intron (NM_001350974, intron 12 of 12) intron (NM_001350974, intron 12 of 12) 17681 NM_001363474 84725 Hs.233495 NM_032639 ENSG00000106086 PLEKHA8 FAPP2 pleckstrin homology domain containing A8 protein-coding chr16-930 chr16 11079704 11079914 + 18.5 0.000 intron (NM_015226, intron 18 of 22) intron (NM_015226, intron 18 of 22) 135245 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr6-1405 chr6 132131784 132131994 + 18.5 0.000 Intergenic UCON78|DNA|DNA -2089 NR_146223 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr9-1293 chr9 79694801 79695011 + 18.5 0.000 intron (NR_104239, intron 9 of 20) intron (NR_104239, intron 9 of 20) 121729 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr7-979 chr7 47591875 47592085 + 18.5 0.000 Intergenic Intergenic -9869 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr10-624 chr10 5565704 5565914 + 18.5 0.000 Intergenic Intergenic 30309 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr22-413 chr22 25543995 25544205 + 18.5 0.000 Intergenic Intergenic -20575 NM_001362778 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr3-1088 chr3 188978887 188979097 + 18.5 0.000 Intergenic Intergenic -31353 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr12-495 chr12 124863751 124863961 + 18.5 0.000 promoter-TSS (NM_001367988) promoter-TSS (NM_001367988) 8 NR_160420 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr3-1247 chr3 151345847 151346057 + 18.5 0.000 intron (NM_022788, intron 1 of 2) intron (NM_022788, intron 1 of 2) -5130 NM_176876 64805 Hs.591281 NM_022788 ENSG00000169313 P2RY12 ADPG-R|BDPLT8|HORK3|P2T(AC)|P2Y(12)R|P2Y(AC)|P2Y(ADP)|P2Y(cyc)|P2Y12|SP1999 purinergic receptor P2Y12 protein-coding chr5-479 chr5 177561344 177561554 + 18.5 0.000 Intergenic LTR13|LTR|ERVK -6886 NM_001190946 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr10-635 chr10 101311312 101311522 + 18.5 0.000 Intergenic Intergenic -42616 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr19-841 chr19 40604024 40604234 + 18.5 0.000 intron (NM_001042545, intron 1 of 29) CpG 2760 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chr2-889 chr2 68466459 68466669 + 18.5 0.000 intron (NR_133923, intron 1 of 1) (ACCAA)n|Simple_repeat|Simple_repeat 730 NM_001024680 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding chr18-97 chr18 79951758 79951968 + 18.5 0.000 promoter-TSS (NM_001146343) promoter-TSS (NM_001146343) -210 NM_001146343 80148 Hs.288284 NM_025078 ENSG00000122490 SLC66A2 PQLC1 solute carrier family 66 member 2 protein-coding chr10-1217 chr10 29228514 29228724 + 18.5 0.000 Intergenic Intergenic -60451 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr10-1103 chr10 79157680 79157890 + 18.5 0.000 intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 88819 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr11-1468 chr11 102276622 102276832 + 18.5 0.000 Intergenic L2|LINE|L2 -40757 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr22-265 chr22 50474418 50474628 + 18.5 0.000 intron (NM_001365819, intron 1 of 39) CpG 512 NM_002972 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr11-482 chr11 44950818 44951028 + 18.5 0.000 promoter-TSS (NM_001318387) promoter-TSS (NM_001318387) -40 NM_001318387 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr18-176 chr18 56233749 56233959 + 18.5 0.000 Intergenic MER5B|DNA|hAT-Charlie -42592 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr2-2095 chr2 237932822 237933032 + 18.5 0.000 Intergenic L1M4|LINE|L1 -34018 NM_001278307 140739 Hs.471785 NM_080678 ENSG00000184182 UBE2F NCE2 ubiquitin conjugating enzyme E2 F (putative) protein-coding chr6-401 chr6 36577338 36577548 + 18.5 0.000 Intergenic Intergenic -16870 NR_036610 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr7-1059 chr7 157390426 157390636 + 18.5 0.000 intron (NM_058246, intron 8 of 9) intron (NM_058246, intron 8 of 9) 53527 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr9-1324 chr9 26265349 26265559 + 18.5 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 198779 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr17-896 chr17 56915941 56916151 + 18.5 0.000 Intergenic L2b|LINE|L2 -1997 NM_005082 7706 Hs.528952 NM_005082 ENSG00000121060 TRIM25 EFP|RNF147|Z147|ZNF147 tripartite motif containing 25 protein-coding chr13-571 chr13 41224212 41224422 + 18.5 0.000 intron (NM_001354074, intron 8 of 9) intron (NM_001354074, intron 8 of 9) -29748 NM_032138 84078 Hs.63841 NM_032138 ENSG00000120696 KBTBD7 - kelch repeat and BTB domain containing 7 protein-coding chr18-317 chr18 76451028 76451238 + 18.5 0.000 intron (NM_014643, intron 2 of 6) intron (NM_014643, intron 2 of 6) -40519 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr7-1186 chr7 44383443 44383653 + 18.5 0.000 3' UTR (NM_015332, exon 6 of 6) 3' UTR (NM_015332, exon 6 of 6) -57917 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr19-698 chr19 40663017 40663227 + 18.5 0.000 Intergenic CpG 27042 NM_001289980 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr22-630 chr22 40177815 40178025 + 18.5 0.000 promoter-TSS (NM_001162501) promoter-TSS (NM_001162501) -5 NM_015088 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr11-600 chr11 45180779 45180989 + 18.5 0.000 intron (NM_001256695, intron 1 of 7) CpG 33541 NM_001256696 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr15-329 chr15 70492754 70492964 + 18.5 0.000 Intergenic Intergenic 13069 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr6-414 chr6 116100831 116101041 + 18.5 0.000 promoter-TSS (NM_152729) promoter-TSS (NM_152729) 83 NM_152729 221294 Hs.520341 NM_152729 ENSG00000178425 NT5DC1 C6orf200|LP2642|NT5C2L1 5'-nucleotidase domain containing 1 protein-coding chr13-604 chr13 99063146 99063356 + 18.5 0.000 intron (NM_015296, intron 1 of 55) intron (NM_015296, intron 1 of 55) 23443 NM_001318849 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr5-751 chr5 112160778 112160988 + 18.5 0.000 promoter-TSS (NR_002922) promoter-TSS (NR_002922) 357 NR_015370 114915 Hs.12082 NM_053000 EPB41L4A-AS1 C5orf26|NCRNA00219|TIGA1 EPB41L4A antisense RNA 1 ncRNA chr14-710 chr14 90837537 90837747 + 18.5 0.000 Intergenic Intergenic -21212 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr11-2401 chr11 3710139 3710349 + 18.5 0.000 intron (NR_157590, intron 20 of 31) intron (NR_157590, intron 20 of 31) -38860 NM_020402 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr12-882 chr12 81800796 81801006 + 18.5 0.000 Intergenic Intergenic -41551 NM_003625 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr2-1135 chr2 46985282 46985492 + 18.5 0.000 intron (NM_001288951, intron 5 of 20) intron (NM_001288951, intron 5 of 20) -43532 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr2-1682 chr2 121568093 121568303 + 18.5 0.000 intron (NM_015282, intron 2 of 38) intron (NM_015282, intron 2 of 38) 37318 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr18-228 chr18 57210400 57210610 + 18.5 0.000 Intergenic Intergenic -39311 NR_149129 105372138 Hs.574448 NR_149129 ENSG00000267726 LINC02565 - long intergenic non-protein coding RNA 2565 ncRNA chr15-547 chr15 38536511 38536721 + 18.5 0.000 intron (NM_001306086, intron 2 of 14) intron (NM_001306086, intron 2 of 14) 28198 NM_001306086 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr1-3110 chr1 40267841 40268051 + 18.5 0.000 intron (NM_005857, intron 3 of 9) intron (NM_005857, intron 3 of 9) 9710 NM_005857 10269 Hs.132642 NM_005857 ENSG00000084073 ZMPSTE24 FACE-1|FACE1|HGPS|PRO1|STE24|Ste24p zinc metallopeptidase STE24 protein-coding chr9-1608 chr9 122158318 122158528 + 18.5 0.000 intron (NM_014222, intron 1 of 3) L2c|LINE|L2 1356 NM_001318195 4702 Hs.495039 NM_014222 ENSG00000119421 NDUFA8 CI-19KD|CI-PGIV|PGIV NADH:ubiquinone oxidoreductase subunit A8 protein-coding chr21-170 chr21 25562124 25562334 + 18.5 0.000 promoter-TSS (NR_001458) promoter-TSS (NR_001458) 84 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene ncRNA chr6-577 chr6 99568623 99568833 + 18.5 0.000 promoter-TSS (NM_005190) promoter-TSS (NM_005190) -68 NM_005190 892 Hs.430646 NM_005190 ENSG00000112237 CCNC CycC|SRB11|hSRB11 cyclin C protein-coding chr6-1012 chr6 43509570 43509780 + 18.5 0.000 exon (NM_001012974, exon 1 of 6) exon (NM_001012974, exon 1 of 6) 668 NM_001012974 221424 Hs.445552 NM_001012974 ENSG00000204052 LRRC73 C6orf154 leucine rich repeat containing 73 protein-coding chr7-554 chr7 4641948 4642158 + 18.5 0.000 Intergenic CpG -40242 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr7-1450 chr7 77812397 77812607 + 18.5 0.000 intron (NM_001366088, intron 1 of 11) intron (NM_001366088, intron 1 of 11) 13531 NM_001366088 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr17-2979 chr17 66625308 66625518 + 18.5 0.000 intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -161659 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr1-1681 chr1 81801043 81801253 + 18.5 0.000 intron (NM_001366006, intron 1 of 23) CpG 214 NM_001366002 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr13-504 chr13 85347419 85347629 + 18.5 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -16079 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr22-235 chr22 43205975 43206185 + 18.5 0.000 intron (NM_173050, intron 21 of 21) (AC)n|Simple_repeat|Simple_repeat -6594 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr12-863 chr12 42921922 42922132 + 18.5 0.000 Intergenic Intergenic 229811 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr8-335 chr8 94040772 94040982 + 18.5 0.000 Intergenic Intergenic 123930 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr2-1926 chr2 198097869 198098079 + 18.5 0.000 intron (NM_006226, intron 3 of 5) intron (NM_006226, intron 3 of 5) 277123 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr20-318 chr20 43657593 43657803 + 18.5 0.000 Intergenic CpG -9321 NM_001278610 4605 Hs.179718 NM_002466 ENSG00000101057 MYBL2 B-MYB|BMYB MYB proto-oncogene like 2 protein-coding chr17-1014 chr17 19362772 19362982 + 18.5 0.000 promoter-TSS (NM_001321214) promoter-TSS (NM_001321214) -139 NM_001330149 27077 Hs.309467 NM_015681 ENSG00000108641 B9D1 B9|EPPB9|JBTS27|MKS9|MKSR-1|MKSR1 B9 domain containing 1 protein-coding chr3-662 chr3 141460291 141460501 + 18.5 0.000 Intergenic Intergenic -26631 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr11-781 chr11 128467738 128467948 + 18.5 0.000 intron (NM_001330451, intron 5 of 6) intron (NM_001330451, intron 5 of 6) 54467 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr6-1781 chr6 93779114 93779324 + 18.5 0.000 Intergenic Intergenic 60916 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr8-721 chr8 47480554 47480764 + 18.5 0.000 intron (NM_001080394, intron 8 of 19) intron (NM_001080394, intron 8 of 19) -173429 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr13-302 chr13 44989481 44989691 + 18.5 0.000 promoter-TSS (NM_018559) promoter-TSS (NM_018559) 48 NM_018559 55425 Hs.731811 NM_018559 ENSG00000133114 GPALPP1 AD029|KIAA1704|LSR7|bA245H20.2 GPALPP motifs containing 1 protein-coding chr8-772 chr8 28415632 28415842 + 18.5 0.000 Intergenic Intergenic -29277 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr11-1358 chr11 64892781 64892991 + 18.5 0.000 non-coding (NR_133638, exon 2 of 2) non-coding (NR_133638, exon 2 of 2) 563 NR_133638 105369343 Hs.199371 NR_133638 MIR194-2HG - MIR194-2 host gene ncRNA chr19-1077 chr19 2579271 2579481 + 18.5 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -51339 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr7-946 chr7 78489944 78490154 + 18.5 0.000 intron (NM_001301128, intron 5 of 20) intron (NM_001301128, intron 5 of 20) 142807 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chrX-74 chrX 40580671 40580881 + 18.5 0.000 promoter-TSS (NM_005765) promoter-TSS (NM_005765) -194 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chr12-345 chr12 52874370 52874580 + 18.5 0.000 Intergenic CpG 24509 NR_162090 113218482 NR_162090 MIR9898 - microRNA 9898 ncRNA chr20-559 chr20 58169538 58169748 + 18.5 0.000 Intergenic LTR40c|LTR|ERVL 18741 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr3-906 chr3 179149088 179149298 + 18.5 0.000 intron (NM_006218, intron 1 of 20) intron (NM_006218, intron 1 of 20) 836 NM_006218 5290 Hs.553498 NM_006218 ENSG00000121879 PIK3CA CLAPO|CLOVE|CWS5|MCAP|MCM|MCMTC|PI3K|PI3K-alpha|p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha protein-coding chr1-2191 chr1 51962922 51963132 + 18.5 0.000 intron (NM_002867, intron 2 of 4) L2b|LINE|L2 27673 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr1-1840 chr1 8061272 8061482 + 18.5 0.000 Intergenic Intergenic -35068 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr12-879 chr12 62934861 62935071 + 18.5 0.000 5' UTR (NM_020700, exon 1 of 10) 5' UTR (NM_020700, exon 1 of 10) 184 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr5-372 chr5 64506244 64506454 + 18.5 0.000 5' UTR (NM_001029875, exon 1 of 6) 5' UTR (NM_001029875, exon 1 of 6) 334 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr20-388 chr20 63896368 63896578 + 18.5 0.000 intron (NM_025219, intron 1 of 4) intron (NM_025219, intron 1 of 4) 1347 NM_025219 80331 Hs.164419 NM_025219 ENSG00000101152 DNAJC5 CLN4|CLN4B|CSP|DNAJC5A|NCL|mir-941-2|mir-941-3|mir-941-4|mir-941-5 DnaJ heat shock protein family (Hsp40) member C5 protein-coding chr17-992 chr17 56756628 56756838 + 18.5 0.000 Intergenic L2c|LINE|L2 77187 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr20-196 chr20 62258621 62258831 + 18.5 0.000 intron (NM_001278649, intron 2 of 12) intron (NM_001278649, intron 2 of 12) 20205 NM_001278649 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding chr10-832 chr10 111835730 111835940 + 18.5 0.000 Intergenic Intergenic 347930 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr13-375 chr13 43331722 43331932 + 18.5 0.000 intron (NM_001347966, intron 10 of 17) intron (NM_001347966, intron 10 of 17) -117025 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr20-863 chr20 1242593 1242803 + 18.5 0.000 exon (NM_001136566, exon 9 of 14) exon (NM_001136566, exon 9 of 14) 16578 NM_001136566 642636 Hs.713451 NM_001136566 ENSG00000244588 RAD21L1 RAD21L|dJ545L17.2 RAD21 cohesin complex component like 1 protein-coding chr3-1494 chr3 119586667 119586877 + 18.5 0.000 intron (NM_001371092, intron 4 of 4) intron (NM_001371092, intron 4 of 4) 7280 NM_001125 141 Hs.99884 NM_001125 ENSG00000144843 ADPRH ARH1|hARH1 ADP-ribosylarginine hydrolase protein-coding chr6-630 chr6 43121160 43121370 + 18.5 0.000 intron (NM_001270398, intron 1 of 19) FLAM_C|SINE|Alu 44451 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr9-1479 chr9 114724038 114724248 + 18.5 0.000 Intergenic L1MB7|LINE|L1 -42054 NR_144867 100505478 Hs.200101 NM_001199233 ENSG00000230601 TEX48 - testis expressed 48 protein-coding chr1-1199 chr1 109239543 109239753 + 18.5 0.000 Intergenic Intergenic -9891 NM_001408 1952 Hs.57652 NM_001408 ENSG00000143126 CELSR2 ADGRC2|CDHF10|EGFL2|Flamingo1|MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 protein-coding chr1-1745 chr1 183093987 183094197 + 18.5 0.000 intron (NM_002293, intron 1 of 27) L2a|LINE|L2 47178 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr3-2244 chr3 47227856 47228066 + 18.5 0.000 TTS (NM_182902) TTS (NM_182902) 22648 NR_145712 109617025 NR_145712 SNORD13J - small nucleolar RNA, C/D box 13J snoRNA chr9-969 chr9 121844028 121844238 + 18.5 0.000 intron (NM_001139442, intron 8 of 8) L1MC2|LINE|L1 101348 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr4-1155 chr4 86032684 86032894 + 18.5 0.000 intron (NM_001363657, intron 11 of 13) intron (NM_001363657, intron 11 of 13) -87017 NR_110879 101929064 Hs.662221 NR_110879 ENSG00000250062 LOC101929064 - uncharacterized LOC101929064 ncRNA chr16-809 chr16 48123264 48123474 + 18.4 0.000 intron (NM_033226, intron 10 of 28) MIR3|SINE|MIR 23401 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr7-593 chr7 35003413 35003623 + 18.4 0.000 intron (NM_015283, intron 6 of 21) intron (NM_015283, intron 6 of 21) 33967 NM_001366673 23333 Hs.408623 NM_015283 ENSG00000173852 DPY19L1 - dpy-19 like C-mannosyltransferase 1 protein-coding chr14-1073 chr14 104738560 104738770 + 18.4 0.000 intron (NM_199165, intron 3 of 12) intron (NM_199165, intron 3 of 12) 8821 NM_199165 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr2-1802 chr2 37832577 37832787 + 18.4 0.000 intron (NR_110012, intron 2 of 3) L3|LINE|CR1 -2971 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr3-1525 chr3 168977822 168978032 + 18.4 0.000 Intergenic OldhAT1|DNA|hAT-Ac 75982 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr3-1756 chr3 184378583 184378793 + 18.4 0.000 promoter-TSS (NM_000460) promoter-TSS (NM_000460) -480 NM_001177598 7066 Hs.1166 NM_000460 ENSG00000090534 THPO MGDF|MKCSF|ML|MPLLG|THCYT1|TPO thrombopoietin protein-coding chr3-511 chr3 195483603 195483813 + 18.4 0.000 Intergenic Intergenic -40688 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr17-1622 chr17 81070560 81070770 + 18.4 0.000 intron (NM_001144888, intron 3 of 13) intron (NM_001144888, intron 3 of 13) 35514 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding chr7-1825 chr7 122161743 122161953 + 18.4 0.000 Intergenic Intergenic -17599 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr14-1177 chr14 55601109 55601319 + 18.4 0.000 intron (NM_004986, intron 1 of 41) intron (NM_004986, intron 1 of 41) 21007 NM_001079521 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding chr4-864 chr4 109207152 109207362 + 18.4 0.000 intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 95401 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr11-1526 chr11 119598694 119598904 + 18.4 0.000 Intergenic MIR|SINE|MIR 130401 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr2-1536 chr2 172928005 172928215 + 18.4 0.000 promoter-TSS (NM_001282901) promoter-TSS (NM_001282901) -95 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr10-987 chr10 129993616 129993826 + 18.4 0.000 Intergenic L1MA3|LINE|L1 -29447 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr1-1069 chr1 225882478 225882688 + 18.4 0.000 promoter-TSS (NM_014698) promoter-TSS (NM_014698) -203 NM_014698 9725 Hs.119387 NM_014698 ENSG00000196187 TMEM63A KIAA0792 transmembrane protein 63A protein-coding chr17-467 chr17 28750192 28750402 + 18.4 0.000 3' UTR (NM_004295, exon 7 of 7) 3' UTR (NM_004295, exon 7 of 7) 6286 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr7-648 chr7 55366031 55366241 + 18.4 0.000 exon (NM_018697, exon 1 of 9) exon (NM_018697, exon 1 of 9) 688 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr1-1848 chr1 24322501 24322711 + 18.4 0.000 promoter-TSS (NM_021180) promoter-TSS (NM_021180) -434 NM_021180 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr13-453 chr13 98495747 98495957 + 18.4 0.000 intron (NM_001032296, intron 2 of 10) intron (NM_001032296, intron 2 of 10) 26273 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr4-654 chr4 174669411 174669621 + 18.4 0.000 intron (NM_006529, intron 7 of 9) intron (NM_006529, intron 7 of 9) -146618 NM_001145816 3248 Hs.596913 NM_000860 ENSG00000164120 HPGD 15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1 15-hydroxyprostaglandin dehydrogenase protein-coding chr5-684 chr5 138579358 138579568 + 18.4 0.000 Intergenic Intergenic -4062 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr5-586 chr5 114449933 114450143 + 18.4 0.000 intron (NR_130785, intron 11 of 12) intron (NR_130785, intron 11 of 12) 16527 NM_170775 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr14-517 chr14 20333147 20333357 + 18.4 0.000 promoter-TSS (NM_021178) promoter-TSS (NM_021178) 27 NM_021178 57820 Hs.107003 NM_021178 ENSG00000100814 CCNB1IP1 C14orf18|HEI10 cyclin B1 interacting protein 1 protein-coding chr6-572 chr6 40719697 40719907 + 18.4 0.000 Intergenic Intergenic -132438 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr18-502 chr18 23651354 23651564 + 18.4 0.000 intron (NM_173505, intron 1 of 9) intron (NM_173505, intron 1 of 9) 11452 NM_173505 147463 Hs.355689 NM_173505 ENSG00000154065 ANKRD29 - ankyrin repeat domain 29 protein-coding chr2-2090 chr2 232731586 232731796 + 18.4 0.000 intron (NR_103493, intron 5 of 6) intron (NR_103493, intron 5 of 6) -2726 NR_103492 26058 Hs.565319 NM_015575 ENSG00000204120 GIGYF2 GYF2|PARK11|PERQ2|PERQ3|TNRC15 GRB10 interacting GYF protein 2 protein-coding chr10-1251 chr10 101695134 101695344 + 18.4 0.000 promoter-TSS (NM_001323541) promoter-TSS (NM_001323541) 56 NM_001323541 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr6-2031 chr6 53752778 53752988 + 18.4 0.000 Intergenic Intergenic -42122 NM_018214 55227 Hs.606493 NM_018214 ENSG00000137269 LRRC1 LANO|dJ523E19.1 leucine rich repeat containing 1 protein-coding chr2-2108 chr2 23567262 23567472 + 18.4 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 182188 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr17-489 chr17 732481 732691 + 18.4 0.000 promoter-TSS (NM_024792) promoter-TSS (NM_024792) -10 NM_024792 79850 Hs.154396 NM_024792 ENSG00000167695 TLCD3A CT120|FAM57A TLC domain containing 3A protein-coding chr9-1153 chr9 16335929 16336139 + 18.4 0.000 Intergenic Intergenic -59721 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr22-279 chr22 31162607 31162817 + 18.4 0.000 intron (NR_024212, intron 1 of 5) MER58B|DNA|hAT-Charlie 2530 NR_024212 91445 Hs.517553 NM_152267 ENSG00000138942 RNF185 - ring finger protein 185 protein-coding chr2-1039 chr2 65320521 65320731 + 18.4 0.000 intron (NM_001128210, intron 4 of 5) intron (NM_001128210, intron 4 of 5) 46152 NM_001128210 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr10-575 chr10 110304989 110305199 + 18.4 0.000 promoter-TSS (NM_005871) promoter-TSS (NM_005871) -174 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr1-1438 chr1 151047727 151047937 + 18.4 0.000 promoter-TSS (NM_017860) promoter-TSS (NM_017860) 81 NM_017860 54964 Hs.549171 NM_017860 ENSG00000143443 C1orf56 MENT chromosome 1 open reading frame 56 protein-coding chr1-3459 chr1 38735655 38735865 + 18.4 0.000 Intergenic L2c|LINE|L2 124012 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr5-915 chr5 107572229 107572439 + 18.4 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 98603 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr12-1504 chr12 50532729 50532939 + 18.4 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 27849 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr5-821 chr5 179233656 179233866 + 18.4 0.000 intron (NM_014244, intron 3 of 21) intron (NM_014244, intron 3 of 21) 111700 NM_014244 9509 Hs.23871 NM_014244 ENSG00000087116 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif 2 protein-coding chr9-1161 chr9 33117392 33117602 + 18.4 0.000 intron (NM_001497, intron 3 of 5) intron (NM_001497, intron 3 of 5) 8805 NR_162131 113219452 NR_162131 MIR12117 - microRNA 12117 ncRNA chr6-1410 chr6 134740536 134740746 + 18.4 0.000 Intergenic Intergenic -200636 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr11-1376 chr11 93895456 93895666 + 18.4 0.000 Intergenic Intergenic -44943 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr17-1607 chr17 75681482 75681692 + 18.4 0.000 intron (NR_126037, intron 3 of 8) intron (NR_126037, intron 3 of 8) 14249 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr20-413 chr20 1213060 1213270 + 18.4 0.000 Intergenic Intergenic 9711 NM_001009612 400831 Hs.148503 NM_001009612 ENSG00000215595 C20orf202 - chromosome 20 open reading frame 202 protein-coding chr19-1084 chr19 15297339 15297549 + 18.4 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) -16993 NM_058243 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr1-937 chr1 228109280 228109490 + 18.4 0.000 promoter-TSS (NM_181462) promoter-TSS (NM_181462) -73 NM_181465 128308 Hs.63236 NM_181441 ENSG00000162910 MRPL55 AAVG5835|L55nt|MRP-L55|PRO19675 mitochondrial ribosomal protein L55 protein-coding chr3-2936 chr3 55750504 55750714 + 18.4 0.000 intron (NR_132749, intron 13 of 17) intron (NR_132749, intron 13 of 17) -91140 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA chr5-1895 chr5 157481857 157482067 + 18.4 0.000 intron (NM_033274, intron 21 of 22) intron (NM_033274, intron 21 of 22) -21862 NR_136205 102724404 Hs.570889 NR_136204 LOC102724404 - uncharacterized LOC102724404 ncRNA chr5-921 chr5 139391658 139391868 + 18.4 0.000 3' UTR (NM_001161546, exon 1 of 1) 3' UTR (NM_001161546, exon 1 of 1) -1850 NM_016459 51237 Hs.409563 NM_016459 ENSG00000170476 MZB1 MEDA-7|PACAP|pERp1 marginal zone B and B1 cell specific protein protein-coding chr17-738 chr17 78708562 78708772 + 18.4 0.000 5' UTR (NM_001365038, exon 3 of 14) 5' UTR (NM_001365038, exon 3 of 14) 8365 NM_001292019 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr1-2356 chr1 38000570 38000780 + 18.4 0.000 intron (NM_004468, intron 1 of 5) intron (NM_004468, intron 1 of 5) 4839 NM_001243878 2275 Hs.57687 NM_004468 ENSG00000183386 FHL3 SLIM2 four and a half LIM domains 3 protein-coding chr3-568 chr3 49469392 49469602 + 18.4 0.000 promoter-TSS (NM_004393) promoter-TSS (NM_004393) -635 NM_001165928 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr11-463 chr11 46294769 46294979 + 18.4 0.000 intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 17212 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr11-3081 chr11 18618058 18618268 + 18.4 0.000 intron (NM_194285, intron 1 of 5) intron (NM_194285, intron 1 of 5) 16179 NM_194285 144108 Hs.738650 NM_194285 ENSG00000179119 SPTY2D1 Spt2 SPT2 chromatin protein domain containing 1 protein-coding chr6-689 chr6 20160400 20160610 + 18.4 0.000 intron (NM_001080480, intron 1 of 12) L1M2|LINE|L1 51964 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr15-181 chr15 72474294 72474504 + 18.4 0.000 promoter-TSS (NM_005744) promoter-TSS (NM_005744) 69 NM_005744 25820 Hs.268787 NM_005744 ENSG00000166233 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding chr4-1169 chr4 958214 958424 + 18.4 0.000 TTS (NM_001347) TTS (NM_001347) 15250 NM_001347 1609 Hs.584858 NM_001347 ENSG00000145214 DGKQ DAGK|DAGK4|DAGK7 diacylglycerol kinase theta protein-coding chr16-587 chr16 84186884 84187094 + 18.4 0.000 promoter-TSS (NM_001243159) promoter-TSS (NM_001243159) 68 NM_001243156 9013 Hs.153022 NM_005679 ENSG00000103168 TAF1C MGC:39976|SL1|TAFI110|TAFI95 TATA-box binding protein associated factor, RNA polymerase I subunit C protein-coding chr11-1387 chr11 226079 226289 + 18.4 0.000 intron (NR_163397, intron 4 of 7) LTR59|LTR|ERV1 10158 NR_163397 23410 Hs.716456 NM_012239 ENSG00000142082 SIRT3 SIR2L3 sirtuin 3 protein-coding chr8-993 chr8 130193865 130194075 + 18.4 0.000 intron (NM_001362925, intron 5 of 29) AluSz6|SINE|Alu 102563 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr1-1347 chr1 15416169 15416379 + 18.4 0.000 intron (NM_024329, intron 1 of 3) intron (NM_024329, intron 1 of 3) 6386 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr1-379 chr1 247331717 247331927 + 18.4 0.000 promoter-TSS (NM_032752) promoter-TSS (NM_032752) 45 NM_032752 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr5-1456 chr5 53071835 53072045 + 18.4 0.000 non-coding (NR_073107, exon 17 of 29) non-coding (NR_073107, exon 17 of 29) 37817 NM_176806 4338 Hs.163645 NM_004531 ENSG00000164172 MOCS2 MCBPE|MOCO1|MOCODB|MPTS molybdenum cofactor synthesis 2 protein-coding chr11-709 chr11 103109379 103109589 + 18.4 0.000 promoter-TSS (NM_001080463) promoter-TSS (NM_001080463) 58 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr22-540 chr22 18056147 18056357 + 18.4 0.000 Intergenic Intergenic -21668 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr22-381 chr22 44649022 44649232 + 18.4 0.000 Intergenic Intergenic -19420 NM_001017529 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr13-298 chr13 113863186 113863396 + 18.4 0.000 promoter-TSS (NR_044993) promoter-TSS (NR_044993) 785 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr3-709 chr3 150703977 150704187 + 18.4 0.000 promoter-TSS (NM_152394) promoter-TSS (NM_152394) 107 NR_121674 101928085 Hs.561114 NR_121674 ENSG00000240137 ERICH6-AS1 - ERICH6 antisense RNA 1 ncRNA chr3-1040 chr3 174937482 174937692 + 18.4 0.000 intron (NM_207015, intron 1 of 13) L2c|LINE|L2 78253 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr9-456 chr9 92878026 92878236 + 18.4 0.000 promoter-TSS (NM_031486) promoter-TSS (NM_031486) -93 NM_031486 83744 Hs.668378 NM_031486 ENSG00000127081 ZNF484 BA526D8.4 zinc finger protein 484 protein-coding chr3-564 chr3 32392540 32392750 + 18.4 0.000 intron (NM_138410, intron 1 of 4) CpG 792 NM_181472 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr1-1172 chr1 156660100 156660310 + 18.4 0.000 TTS (NM_021948) TTS (NM_021948) 17202 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr11-1919 chr11 66234968 66235178 + 18.4 0.000 intron (NM_018026, intron 17 of 23) intron (NM_018026, intron 17 of 23) -22221 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr15-865 chr15 41585490 41585700 + 18.4 0.000 Intergenic CpG 25623 NM_001330264 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr4-1448 chr4 122739256 122739466 + 18.4 0.000 intron (NM_001178007, intron 2 of 2) L1M3|LINE|L1 6657 NM_152618 166379 Hs.400698 NM_152618 ENSG00000181004 BBS12 C4orf24 Bardet-Biedl syndrome 12 protein-coding chr11-1466 chr11 96187881 96188091 + 18.4 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -153452 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr1-2163 chr1 25371858 25372068 + 18.4 0.000 intron (NM_138617, intron 5 of 6) intron (NM_138617, intron 5 of 6) 33629 NM_014313 23585 Hs.705699 NM_014313 ENSG00000183726 TMEM50A IFNRC|SMP1 transmembrane protein 50A protein-coding chr1-2210 chr1 93693268 93693478 + 18.4 0.000 intron (NM_001261408, intron 3 of 13) intron (NM_001261408, intron 3 of 13) -11536 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr12-2269 chr12 104110115 104110325 + 18.4 0.000 Intergenic Intergenic 27990 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chrX-224 chrX 132023294 132023504 + 18.4 0.000 promoter-TSS (NM_001042452) promoter-TSS (NM_001042452) 97 NM_016542 51765 Hs.444247 NM_016542 ENSG00000134602 STK26 MASK|MST4 serine/threonine kinase 26 protein-coding chr10-520 chr10 123930386 123930596 + 18.4 0.000 Intergenic Intergenic -38684 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr7-982 chr7 55105242 55105452 + 18.4 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -4492 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr19-813 chr19 45886557 45886767 + 18.4 0.000 promoter-TSS (NM_015649) promoter-TSS (NM_015649) -521 NM_015649 26145 Hs.515477 NM_015649 ENSG00000170604 IRF2BP1 - interferon regulatory factor 2 binding protein 1 protein-coding chr4-444 chr4 74682834 74683044 + 18.4 0.000 Intergenic L1MA2|LINE|L1 111584 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr18-554 chr18 63708761 63708971 + 18.4 0.000 intron (NM_001370475, intron 1 of 7) L2a|LINE|L2 5906 NM_001291278 89778 Hs.350958 NM_080475 ENSG00000206072 SERPINB11 EPIPIN|SERPIN11 serpin family B member 11 (gene/pseudogene) protein-coding chr2-995 chr2 172783183 172783393 + 18.4 0.000 intron (NM_007023, intron 1 of 30) LTR84b|LTR|ERVL -38299 NM_001100397 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr10-514 chr10 102523097 102523307 + 18.4 0.000 intron (NM_001178133, intron 2 of 10) intron (NM_001178133, intron 2 of 10) 19230 NM_001178133 51684 Hs.404089 NM_016169 ENSG00000107882 SUFU JBTS32|PRO1280|SUFUH|SUFUXL SUFU negative regulator of hedgehog signaling protein-coding chr17-496 chr17 45124072 45124282 + 18.4 0.000 intron (NM_133373, intron 1 of 14) intron (NM_133373, intron 1 of 14) 8338 NM_133373 113026 Hs.380094 NM_133373 ENSG00000161714 PLCD3 PLC-delta-3 phospholipase C delta 3 protein-coding chr11-1223 chr11 59755070 59755280 + 18.4 0.000 promoter-TSS (NM_004177) promoter-TSS (NM_004177) -201 NM_004177 6809 Hs.180711 NM_004177 ENSG00000166900 STX3 STX3A syntaxin 3 protein-coding chr16-1383 chr16 69831381 69831591 + 18.4 0.000 intron (NM_001270455, intron 4 of 8) intron (NM_001270455, intron 4 of 8) -7251 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr11-1412 chr11 33622348 33622558 + 18.4 0.000 intron (NM_012194, intron 16 of 20) LTR67B|LTR|ERVL 78287 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr6-1027 chr6 131946958 131947168 + 18.4 0.000 Intergenic MamRTE1|LINE|RTE-BovB 4309 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr8-617 chr8 120153736 120153946 + 18.4 0.000 intron (NM_021110, intron 2 of 47) intron (NM_021110, intron 2 of 47) 28739 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr9-575 chr9 94903964 94904174 + 18.4 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 41485 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr10-2047 chr10 88346946 88347156 + 18.4 0.000 intron (NM_018363, intron 5 of 6) intron (NM_018363, intron 5 of 6) 236267 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr22-695 chr22 28243610 28243820 + 18.4 0.000 intron (NM_001145418, intron 5 of 22) intron (NM_001145418, intron 5 of 22) -216154 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr8-1340 chr8 61745167 61745377 + 18.4 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 30484 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr15-776 chr15 43505836 43506046 + 18.4 0.000 intron (NM_005657, intron 1 of 27) intron (NM_005657, intron 1 of 27) 4699 NM_005657 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding chr10-1087 chr10 35546940 35547150 + 18.4 0.000 intron (NM_181698, intron 9 of 11) intron (NM_181698, intron 9 of 11) -58296 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding chr8-963 chr8 96822463 96822673 + 18.4 0.000 intron (NM_016134, intron 2 of 7) L1MA8|LINE|L1 177326 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr9-1213 chr9 125484866 125485076 + 18.4 0.000 intron (NM_024117, intron 7 of 10) intron (NM_024117, intron 7 of 10) 222237 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr11-1722 chr11 94152233 94152443 + 18.4 0.000 intron (NM_015368, intron 1 of 4) MIRc|SINE|MIR 23497 NM_015368 24145 Hs.591976 NM_015368 ENSG00000110218 PANX1 MRS1|PX1|UNQ2529 pannexin 1 protein-coding chr17-944 chr17 17723879 17724089 + 18.4 0.000 intron (NM_030665, intron 1 of 5) CpG 42318 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr2-1231 chr2 45992464 45992674 + 18.4 0.000 intron (NM_005400, intron 6 of 14) intron (NM_005400, intron 6 of 14) -304838 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr3-773 chr3 197298620 197298830 + 18.4 0.000 promoter-TSS (NM_001366205) promoter-TSS (NM_001366205) -113 NM_001366208 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr10-1625 chr10 75718233 75718443 + 18.4 0.000 intron (NR_132791, intron 1 of 2) intron (NR_132791, intron 1 of 2) 5883 NR_132791 105378367 Hs.464836 NR_132791 LOC105378367 - uncharacterized LOC105378367 ncRNA chr5-1001 chr5 73519667 73519877 + 18.4 0.000 Intergenic Intergenic 21347 NM_001037637 689 Hs.591768 NM_001207 ENSG00000145741 BTF3 BETA-NAC|BTF3a|BTF3b|NACB basic transcription factor 3 protein-coding chr5-1119 chr5 37889982 37890192 + 18.4 0.000 Intergenic Intergenic 49649 NR_103441 100861519 Hs.536820 NM_001278094 GDNF-AS1 GDNFOS GDNF antisense RNA 1 ncRNA chr11-1574 chr11 118316641 118316851 + 18.4 0.000 TTS (NM_000733) TTS (NM_000733) 12166 NM_000733 916 Hs.3003 NM_000733 ENSG00000198851 CD3E IMD18|T3E|TCRE CD3e molecule protein-coding chr6-1074 chr6 38117368 38117578 + 18.4 0.000 intron (NM_021943, intron 5 of 5) intron (NM_021943, intron 5 of 5) 297746 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr5-1111 chr5 17290474 17290684 + 18.4 0.000 Intergenic Intergenic 72948 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr1-1376 chr1 77370948 77371158 + 18.4 0.000 intron (NM_012093, intron 6 of 13) intron (NM_012093, intron 6 of 13) 87966 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr6-746 chr6 42800524 42800734 + 18.4 0.000 intron (NM_001318819, intron 2 of 13) AluSz6|SINE|Alu 17133 NR_134654 401261 Hs.656652 NM_001004322 LOC401261 - uncharacterized LOC401261 ncRNA chr9-1737 chr9 127283984 127284194 + 18.4 0.000 intron (NR_104591, intron 1 of 26) intron (NR_104591, intron 1 of 26) 19315 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr2-1152 chr2 109339732 109339942 + 18.4 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -26212 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr10-2580 chr10 71808705 71808915 + 18.4 0.000 intron (NM_001171934, intron 13 of 21) L2c|LINE|L2 -3073 NM_001171935 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr15-882 chr15 73608908 73609118 + 18.4 0.000 intron (NM_012428, intron 1 of 8) L2|LINE|L2 24376 NM_017455 27020 Hs.744867 NM_012428 ENSG00000156642 NPTN GP55|GP65|SDFR1|SDR1|np55|np65 neuroplastin protein-coding chr2-2511 chr2 170525668 170525878 + 18.4 0.000 intron (NR_045682, intron 31 of 35) intron (NR_045682, intron 31 of 35) -174830 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr20-332 chr20 63215131 63215341 + 18.4 0.000 intron (NM_017798, intron 2 of 4) intron (NM_017798, intron 2 of 4) 895 NM_017798 54915 Hs.744852 NM_017798 ENSG00000149658 YTHDF1 C20orf21 YTH N6-methyladenosine RNA binding protein 1 protein-coding chr10-1081 chr10 26445484 26445694 + 18.4 0.000 intron (NM_019043, intron 2 of 14) intron (NM_019043, intron 2 of 14) 7248 NM_019043 54518 Hs.310421 NM_019043 ENSG00000077420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta precursor protein binding family B member 1 interacting protein protein-coding chr16-439 chr16 75109061 75109271 + 18.4 0.000 3' UTR (NM_032268, exon 5 of 5) 3' UTR (NM_032268, exon 5 of 5) 7606 NM_194436 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr7-857 chr7 45761780 45761990 + 18.4 0.000 intron (NR_024271, intron 1 of 12) intron (NR_024271, intron 1 of 12) 7133 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr3-1442 chr3 32045196 32045406 + 18.4 0.000 Intergenic Intergenic -61210 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chr2-1454 chr2 13821311 13821521 + 18.4 0.000 Intergenic Intergenic 579542 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr4-365 chr4 152536318 152536528 + 18.4 0.000 promoter-TSS (NM_001349798) promoter-TSS (NM_001349798) -5 NR_039658 100616193 NR_039658 ENSG00000283792 MIR4453 - microRNA 4453 ncRNA chr8-786 chr8 69223655 69223865 + 18.4 0.000 Intergenic Intergenic -119570 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr19-1420 chr19 51784970 51785180 + 18.4 0.000 Intergenic LTR8|LTR|ERV1 -10082 NM_002030 2359 Hs.445466 NM_002030 ENSG00000187474 FPR3 FML2_HUMAN|FMLP-R-II|FMLPY|FPRH1|FPRH2|FPRL2|RMLP-R-I formyl peptide receptor 3 protein-coding chr20-611 chr20 8291953 8292163 + 18.4 0.000 intron (NM_182734, intron 2 of 32) MamRep137|DNA|TcMar-Tigger 43354 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr12-637 chr12 70645876 70646086 + 18.4 0.000 intron (NR_073474, intron 9 of 10) intron (NR_073474, intron 9 of 10) -8552 NM_001330204 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase receptor type B protein-coding chr1-2679 chr1 201376748 201376958 + 18.4 0.000 intron (NM_001276347, intron 1 of 15) intron (NM_001276347, intron 1 of 15) 827 NM_001276347 7139 Hs.533613 NM_000364 ENSG00000118194 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T2, cardiac type protein-coding chr7-1492 chr7 134855357 134855567 + 18.4 0.000 intron (NM_033157, intron 2 of 14) intron (NM_033157, intron 2 of 14) -35938 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr19-436 chr19 10096110 10096320 + 18.4 0.000 exon (NM_001321411, exon 2 of 6) exon (NM_001321411, exon 2 of 6) 6442 NM_001321411 83854 Hs.712850 NM_031917 ENSG00000130812 ANGPTL6 AGF|ARP5 angiopoietin like 6 protein-coding chr1-3193 chr1 145782533 145782743 + 18.4 0.000 intron (NM_014455, intron 3 of 8) intron (NM_014455, intron 3 of 8) 41457 NM_014455 27246 Hs.523550 NM_014455 ENSG00000265491 RNF115 BCA2|ZNF364 ring finger protein 115 protein-coding chr13-414 chr13 44574340 44574550 + 18.4 0.000 exon (NM_001243799, exon 1 of 2) exon (NM_001243799, exon 1 of 2) -1451 NR_038381 641467 Hs.624196 NR_038381 ENSG00000278156 TSC22D1-AS1 - TSC22D1 antisense RNA 1 ncRNA chr13-471 chr13 44053069 44053279 + 18.4 0.000 Intergenic Intergenic 30839 NR_026955 121838 Hs.201441 NR_026955 LINC00284 NCRNA00284 long intergenic non-protein coding RNA 284 ncRNA chr1-1653 chr1 240658747 240658957 + 18.4 0.000 Intergenic AluSz6|SINE|Alu -46697 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr15-826 chr15 97968514 97968724 + 18.4 0.000 intron (NM_183376, intron 4 of 7) intron (NM_183376, intron 4 of 7) 7916 NM_183376 91947 Hs.6093 NM_183376 ENSG00000140450 ARRDC4 - arrestin domain containing 4 protein-coding chr12-829 chr12 52181749 52181959 + 18.4 0.000 intron (NM_182507, intron 2 of 8) intron (NM_182507, intron 2 of 8) 10160 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr2-1558 chr2 240837314 240837524 + 18.4 0.000 Intergenic Intergenic -17111 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr9-1022 chr9 116337022 116337232 + 18.4 0.000 intron (NM_002581, intron 13 of 21) intron (NM_002581, intron 13 of 21) 63479 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr8-1168 chr8 26010337 26010547 + 18.4 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 34971 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr22-432 chr22 43186655 43186865 + 18.4 0.000 intron (NM_015140, intron 1 of 13) CpG 374 NM_015140 23170 Hs.517670 NM_015140 ENSG00000100304 TTLL12 dJ526I14.2 tubulin tyrosine ligase like 12 protein-coding chr14-470 chr14 91284129 91284339 + 18.4 0.000 intron (NM_001080414, intron 25 of 29) intron (NM_001080414, intron 25 of 29) -30354 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr19-1531 chr19 11203636 11203846 + 18.4 0.000 non-coding (NR_134909, exon 1 of 3) non-coding (NR_134909, exon 1 of 3) 113 NR_134909 105372273 Hs.579864 NR_134909 ENSG00000267082 LOC105372273 - uncharacterized LOC105372273 ncRNA chr15-1065 chr15 83000369 83000579 + 18.4 0.000 3' UTR (NM_144597, exon 4 of 4) 3' UTR (NM_144597, exon 4 of 4) 11165 NR_027649 123207 Hs.352541 NM_144597 ENSG00000169609 C15orf40 - chromosome 15 open reading frame 40 protein-coding chr13-165 chr13 30306860 30307070 + 18.4 0.000 promoter-TSS (NM_001014380) promoter-TSS (NM_001014380) 46 NM_001014380 84056 Hs.243596 NM_032116 ENSG00000102781 KATNAL1 - katanin catalytic subunit A1 like 1 protein-coding chr5-1026 chr5 135466262 135466472 + 18.4 0.000 Intergenic Intergenic -14016 NM_001099221 497189 Hs.552091 NM_001099221 ENSG00000255833 TIFAB - TIFA inhibitor protein-coding chr3-1022 chr3 127598253 127598463 + 18.4 0.000 promoter-TSS (NM_001353003) promoter-TSS (NM_001353003) -53 NM_004526 4171 Hs.477481 NM_004526 ENSG00000073111 MCM2 BM28|CCNL1|CDCL1|D3S3194|DFNA70|MITOTIN|cdc19 minichromosome maintenance complex component 2 protein-coding chr22-859 chr22 36027960 36028170 + 18.4 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) 472 NM_001082579 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr17-894 chr17 49260309 49260519 + 18.4 0.000 Intergenic CpG 12171 NR_034161 124871 Hs.446890 NM_001007529 ENSG00000177369 FLJ40194 - uncharacterized FLJ40194 ncRNA chr1-3444 chr1 22704682 22704892 + 18.4 0.000 Intergenic Intergenic -6051 NM_017449 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr17-1374 chr17 78875121 78875331 + 18.4 0.000 intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 27975 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr5-912 chr5 96627045 96627255 + 18.4 0.000 intron (NR_130776, intron 4 of 4) MIRc|SINE|MIR -34887 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr1-4652 chr1 185865061 185865271 + 18.4 0.000 intron (NM_031935, intron 3 of 106) MLT1H|LTR|ERVL-MaLR 130775 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr7-1311 chr7 100149375 100149585 + 18.4 0.000 intron (NR_134530, intron 1 of 3) intron (NR_134530, intron 1 of 3) 502 NR_134528 389541 Hs.406520 NM_001008395 ENSG00000188186 LAMTOR4 C7orf59 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding chr1-2423 chr1 2922977 2923187 + 18.4 0.000 Intergenic Intergenic -98385 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr6-801 chr6 33504730 33504940 + 18.4 0.000 Intergenic L1MEd|LINE|L1 50259 NM_152735 221504 Hs.591805 NM_152735 ENSG00000213588 ZBTB9 ZNF919 zinc finger and BTB domain containing 9 protein-coding chr16-854 chr16 73768801 73769011 + 18.4 0.000 Intergenic Intergenic 382101 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr13-695 chr13 34155918 34156128 + 18.4 0.000 Intergenic Intergenic -192020 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr7-1379 chr7 128408822 128409032 + 18.4 0.000 intron (NM_183243, intron 1 of 14) intron (NM_183243, intron 1 of 14) 1055 NM_000883 3614 Hs.654401 NM_000883 ENSG00000106348 IMPDH1 IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608 inosine monophosphate dehydrogenase 1 protein-coding chr12-659 chr12 79452134 79452344 + 18.4 0.000 TTS (NM_001135805) TTS (NM_001135805) 32982 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr5-2084 chr5 177449440 177449650 + 18.4 0.000 intron (NM_001174102, intron 1 of 2) intron (NM_001174102, intron 1 of 2) 1220 NM_001174102 80758 Hs.534492 NM_030567 ENSG00000131188 PRR7 - proline rich 7, synaptic protein-coding chr6-1429 chr6 151431402 151431612 + 18.4 0.000 intron (NM_001271937, intron 3 of 10) intron (NM_001271937, intron 3 of 10) 20619 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr9-287 chr9 111484197 111484407 + 18.4 0.000 promoter-TSS (NM_001364929) promoter-TSS (NM_001364929) 81 NM_001364929 23392 Hs.368255 NM_001080398 ENSG00000136813 ECPAS ECM29|KIAA0368 Ecm29 proteasome adaptor and scaffold protein-coding chr11-1802 chr11 121932848 121933058 + 18.4 0.000 Intergenic Intergenic 166891 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr9-698 chr9 6218030 6218240 + 18.4 0.000 intron (NM_001199640, intron 1 of 6) intron (NM_001199640, intron 1 of 6) 2328 NM_001314046 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr10-1591 chr10 31062752 31062962 + 18.4 0.000 Intergenic Intergenic -30920 NM_001143768 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr7-1543 chr7 1198499 1198709 + 18.4 0.000 Intergenic AluSx1|SINE|Alu -34268 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr1-1559 chr1 3473645 3473855 + 18.4 0.000 intron (NM_014448, intron 8 of 14) intron (NM_014448, intron 8 of 14) 19085 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr14-534 chr14 105072479 105072689 + 18.4 0.000 Intergenic Intergenic -7154 NM_001278694 29933 Hs.532504 NM_013345 ENSG00000183484 GPR132 G2A G protein-coupled receptor 132 protein-coding chr10-776 chr10 17348850 17349060 + 18.4 0.000 intron (NM_001004470, intron 4 of 7) intron (NM_001004470, intron 4 of 7) -37981 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr8-1475 chr8 26374091 26374301 + 18.4 0.000 Intergenic AluJo|SINE|Alu 8757 NR_144550 157489 Hs.586388 NR_144550 ENSG00000228451 SDAD1P1 - SDA1 domain containing 1 pseudogene 1 pseudo chr19-1039 chr19 17334822 17335032 + 18.4 0.000 promoter-TSS (NM_020959) promoter-TSS (NM_020959) -55 NM_001195422 84705 Hs.334885 NM_032620 ENSG00000130299 GTPBP3 COXPD23|GTPBG3|MSS1|MTGP1|THDF1 GTP binding protein 3, mitochondrial protein-coding chr7-1010 chr7 2114166 2114376 + 18.4 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -25219 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr18-181 chr18 46104446 46104656 + 18.4 0.000 promoter-TSS (NM_001001937) promoter-TSS (NM_001001937) 166 NR_026978 115106 Hs.436617 NM_138443 ENSG00000152240 HAUS1 CCDC5|HEI-C|HEIC|HsT1461 HAUS augmin like complex subunit 1 protein-coding chr1-2113 chr1 173429955 173430165 + 18.4 0.000 intron (NR_125960, intron 1 of 1) intron (NR_125960, intron 1 of 1) 31302 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr9-1357 chr9 134940277 134940487 + 18.4 0.000 Intergenic Intergenic -22470 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr16-958 chr16 87896275 87896485 + 18.4 0.000 intron (NR_159798, intron 5 of 7) intron (NR_159798, intron 5 of 7) -26873 NM_003486 8140 Hs.513797 NM_003486 ENSG00000103257 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16 solute carrier family 7 member 5 protein-coding chr4-730 chr4 2482742 2482952 + 18.4 0.000 intron (NM_001185009, intron 2 of 8) intron (NM_001185009, intron 2 of 8) 13394 NM_001185009 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr15-598 chr15 101440109 101440319 + 18.4 0.000 intron (NM_138325, intron 2 of 13) intron (NM_138325, intron 2 of 13) 49493 NM_002570 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr16-1652 chr16 49644025 49644235 + 18.4 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) 20194 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr10-1634 chr10 86402506 86402716 + 18.4 0.000 Intergenic Intergenic -35816 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr2-587 chr2 178194387 178194597 + 18.4 0.000 promoter-TSS (NM_001201481) promoter-TSS (NM_001201481) 11 NM_001201482 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr12-1767 chr12 87995725 87995935 + 18.4 0.000 intron (NM_001363616, intron 6 of 11) intron (NM_001363616, intron 6 of 11) 33571 NM_152589 160419 Hs.112930 NM_152589 ENSG00000165805 C12orf50 - chromosome 12 open reading frame 50 protein-coding chr9-1045 chr9 136045092 136045302 + 18.4 0.000 intron (NM_144653, intron 2 of 5) intron (NM_144653, intron 2 of 5) 50092 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr1-2087 chr1 72284991 72285201 + 18.4 0.000 Intergenic Intergenic -2557 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr15-671 chr15 74051506 74051716 + 18.4 0.000 Intergenic Intergenic 30939 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr3-977 chr3 148723585 148723795 + 18.4 0.000 intron (NM_000685, intron 2 of 2) intron (NM_000685, intron 2 of 2) -6490 NM_032049 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr6-720 chr6 111647052 111647262 + 18.4 0.000 Intergenic Intergenic -40883 NM_001164281 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chrX-203 chrX 153520061 153520271 + 18.4 0.000 Intergenic Intergenic -15956 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr2-1697 chr2 171482970 171483180 + 18.4 0.000 non-coding (NR_028482, exon 13 of 13) non-coding (NR_028482, exon 13 of 13) -39158 NM_001256909 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr6-887 chr6 98929782 98929992 + 18.4 0.000 intron (NR_103837, intron 1 of 4) intron (NR_103837, intron 1 of 4) 18059 NR_103836 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr4-503 chr4 41177080 41177290 + 18.4 0.000 intron (NM_173075, intron 1 of 16) intron (NM_173075, intron 1 of 16) 37357 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr1-2636 chr1 148522777 148522987 + 18.4 0.000 Intergenic Intergenic -39597 NM_001123068 644591 Hs.534674 NM_001123068 ENSG00000236334 PPIAL4G COAS-2 peptidylprolyl isomerase A like 4G protein-coding chr14-518 chr14 20961350 20961560 + 18.4 0.000 Intergenic AluY|SINE|Alu 5968 NM_002934 6036 Hs.728 NM_002934 ENSG00000169385 RNASE2 EDN|RAF3|RNS2 ribonuclease A family member 2 protein-coding chr3-1122 chr3 159947336 159947546 + 18.4 0.000 intron (NR_108088, intron 9 of 9) intron (NR_108088, intron 9 of 9) -41394 NM_000882 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr10-1475 chr10 119521773 119521983 + 18.4 0.000 intron (NM_001005339, intron 3 of 4) HAL1|LINE|L1 14655 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr10-610 chr10 86937196 86937406 + 18.4 0.000 intron (NM_024756, intron 6 of 6) intron (NM_024756, intron 6 of 6) -18458 NM_001330120 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chr3-682 chr3 149300329 149300539 + 18.4 0.000 Intergenic MER72B|LTR|ERV1 33004 NM_001184723 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr15-239 chr15 42581484 42581694 + 18.4 0.000 intron (NM_020759, intron 1 of 32) CpG 5983 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr15-989 chr15 63752189 63752399 + 18.4 0.000 intron (NM_003922, intron 8 of 77) intron (NM_003922, intron 8 of 77) 81654 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding chr1-1959 chr1 97938129 97938339 + 18.4 0.000 intron (NR_146275, intron 1 of 1) intron (NR_146275, intron 1 of 1) 3506 NR_146275 109729128 NR_146275 LINC01930 - long intergenic non-protein coding RNA 1930 ncRNA chr4-588 chr4 56436222 56436432 + 18.4 0.000 promoter-TSS (NM_001079524) promoter-TSS (NM_001079524) 67 NM_001079525 10606 Hs.518774 NM_006452 ENSG00000128050 PAICS ADE2|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase protein-coding chr6-1058 chr6 12427368 12427578 + 18.4 0.000 Intergenic Intergenic 137112 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr1-867 chr1 160098925 160099135 + 18.4 0.000 promoter-TSS (NM_052868) promoter-TSS (NM_052868) -202 NM_001206665 93185 Hs.332012 NM_052868 ENSG00000162729 IGSF8 CD316|CD81P3|EWI-2|EWI2|KCT-4|LIR-D1|PGRL immunoglobulin superfamily member 8 protein-coding chr20-366 chr20 34216085 34216295 + 18.4 0.000 Intergenic CpG -44175 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr7-1786 chr7 79155784 79155994 + 18.4 0.000 intron (NM_001301128, intron 1 of 20) L2a|LINE|L2 146901 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr19-1086 chr19 18494196 18494406 + 18.4 0.000 intron (NM_006532, intron 1 of 11) (AG)n|Simple_repeat|Simple_repeat 27769 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr14-566 chr14 54562466 54562676 + 18.4 0.000 Intergenic Intergenic -5041 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr15-751 chr15 62113001 62113211 + 18.4 0.000 Intergenic MIRb|SINE|MIR 46129 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding chr1-1041 chr1 35268538 35268748 + 18.4 0.000 promoter-TSS (NM_001350138) promoter-TSS (NM_001350138) -66 NM_001350138 9202 Hs.269211 NM_005095 ENSG00000146463 ZMYM4 CDIR|MYM|ZNF198L3|ZNF262 zinc finger MYM-type containing 4 protein-coding chr15-343 chr15 75837009 75837219 + 18.4 0.000 Intergenic Intergenic -6333 NM_001284382 92912 Hs.23033 NM_173469 ENSG00000140367 UBE2Q2 - ubiquitin conjugating enzyme E2 Q2 protein-coding chr14-302 chr14 20469376 20469586 + 18.4 0.000 5' UTR (NM_000270, exon 1 of 6) 5' UTR (NM_000270, exon 1 of 6) 102 NM_000270 4860 Hs.75514 NM_000270 ENSG00000198805 PNP NP|PRO1837|PUNP purine nucleoside phosphorylase protein-coding chr1-2192 chr1 53740662 53740872 + 18.4 0.000 Intergenic Intergenic -1603 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr20-575 chr20 36858558 36858768 + 18.4 0.000 intron (NM_080627, intron 1 of 14) intron (NM_080627, intron 1 of 14) 1210 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr14-306 chr14 58427694 58427904 + 18.4 0.000 promoter-TSS (NR_130752) promoter-TSS (NR_130752) 80 NM_001329945 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr7-935 chr7 40551751 40551961 + 18.4 0.000 intron (NM_001193312, intron 11 of 12) intron (NM_001193312, intron 11 of 12) 416880 NM_001193312 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding chr19-907 chr19 55675070 55675280 + 18.4 0.000 promoter-TSS (NM_001130072) promoter-TSS (NM_001130072) -20 NM_013333 29924 Hs.279953 NM_013333 ENSG00000063245 EPN1 - epsin 1 protein-coding chr14-477 chr14 50061179 50061389 + 18.4 0.000 intron (NR_131171, intron 2 of 8) intron (NR_131171, intron 2 of 8) 43759 NR_131171 196913 Hs.406934 NM_001014830 LINC01599 C14orf183 long intergenic non-protein coding RNA 1599 ncRNA chr11-668 chr11 61429866 61430076 + 18.4 0.000 promoter-TSS (NM_017841) promoter-TSS (NM_017841) 4 NM_001136040 79869 Hs.718984 NM_024811 ENSG00000149532 CPSF7 CFIm59 cleavage and polyadenylation specific factor 7 protein-coding chr13-355 chr13 113152280 113152490 + 18.4 0.000 Intergenic Intergenic -6263 NM_003891 8858 Hs.1011 NM_003891 ENSG00000126231 PROZ PZ protein Z, vitamin K dependent plasma glycoprotein protein-coding chr1-2502 chr1 181010872 181011082 + 18.4 0.000 intron (NM_005819, intron 1 of 7) intron (NM_005819, intron 1 of 7) 11893 NM_005819 10228 Hs.518417 NM_005819 ENSG00000135823 STX6 - syntaxin 6 protein-coding chr19-1459 chr19 44304052 44304262 + 18.3 0.000 intron (NM_004234, intron 1 of 4) intron (NM_004234, intron 1 of 4) 868 NM_004234 9310 Hs.613424 NM_004234 ENSG00000159917 ZNF235 ANF270|HZF6|ZFP93|ZNF270 zinc finger protein 235 protein-coding chr14-824 chr14 103346303 103346513 + 18.3 0.000 Intergenic MER65-int|LTR|ERV1 8559 NR_002964 677811 Hs.658237 NR_002964 ENSG00000272533 SNORA28 ACA28 small nucleolar RNA, H/ACA box 28 snoRNA chr11-1015 chr11 65301834 65302044 + 18.3 0.000 Intergenic Intergenic -12927 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr1-3001 chr1 208344241 208344451 + 18.3 0.000 Intergenic Intergenic -99962 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr18-83 chr18 9136502 9136712 + 18.3 0.000 promoter-TSS (NM_015208) promoter-TSS (NM_015208) 113 NR_110771 101927275 Hs.656442 NR_110771 ENSG00000266053 NDUFV2-AS1 - NDUFV2 antisense RNA 1 ncRNA chr3-970 chr3 113018597 113018807 + 18.3 0.000 intron (NR_134969, intron 1 of 5) MIR|SINE|MIR 969 NM_001319111 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr4-995 chr4 169284661 169284871 + 18.3 0.000 Intergenic AluJr|SINE|Alu -13810 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chrX-143 chrX 65534741 65534951 + 18.3 0.000 promoter-TSS (NM_031206) promoter-TSS (NM_031206) -40 NM_031206 81887 Hs.522675 NM_031206 ENSG00000001497 LAS1L Las1-like|WTS|dJ475B7.2 LAS1 like, ribosome biogenesis factor protein-coding chr1-2540 chr1 3649920 3650130 + 18.3 0.000 promoter-TSS (NM_017818) promoter-TSS (NM_017818) 78 NM_017818 49856 Hs.31714 NM_017818 ENSG00000116213 WRAP73 WDR8 WD repeat containing, antisense to TP73 protein-coding chr4-392 chr4 143184873 143185083 + 18.3 0.000 promoter-TSS (NR_136203) promoter-TSS (NR_136203) 61 NM_032557 84640 Hs.480848 NM_032557 ENSG00000170185 USP38 HP43.8KD ubiquitin specific peptidase 38 protein-coding chr1-2403 chr1 201475286 201475496 + 18.3 0.000 Intergenic Intergenic -6203 NM_012396 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr1-1497 chr1 1541481 1541691 + 18.3 0.000 promoter-TSS (NM_001114748) promoter-TSS (NM_001114748) -962 NM_001114748 339453 Hs.668654 NM_001114748 ENSG00000205090 TMEM240 C1orf70|SCA21 transmembrane protein 240 protein-coding chr4-979 chr4 78784150 78784360 + 18.3 0.000 intron (NM_017593, intron 1 of 13) intron (NM_017593, intron 1 of 13) 7877 NM_198892 55589 Hs.146551 NM_017593 ENSG00000138756 BMP2K BIKE|HRIHFB2017 BMP2 inducible kinase protein-coding chr4-1076 chr4 128517824 128518034 + 18.3 0.000 intron (NR_125882, intron 8 of 8) intron (NR_125882, intron 8 of 8) 89913 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr19-880 chr19 48933511 48933721 + 18.3 0.000 promoter-TSS (NM_014475) promoter-TSS (NM_014475) -83 NM_014475 27294 Hs.631555 NM_014475 ENSG00000104808 DHDH 2DD|HUM2DD dihydrodiol dehydrogenase protein-coding chr8-244 chr8 30727882 30728092 + 18.3 0.000 promoter-TSS (NM_001195103) promoter-TSS (NM_001195103) 12 NM_001195104 2936 Hs.271510 NM_000637 ENSG00000104687 GSR GR|HEL-75|HEL-S-122m glutathione-disulfide reductase protein-coding chr6-690 chr6 22448490 22448700 + 18.3 0.000 Intergenic Intergenic -120971 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr20-620 chr20 19889488 19889698 + 18.3 0.000 promoter-TSS (NM_018993) promoter-TSS (NM_018993) 27 NM_018993 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr1-1877 chr1 112394224 112394434 + 18.3 0.000 Intergenic Intergenic -1885 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr6-543 chr6 146357617 146357827 + 18.3 0.000 intron (NM_001278065, intron 6 of 9) intron (NM_001278065, intron 6 of 9) -186111 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr5-742 chr5 173645485 173645695 + 18.3 0.000 Intergenic Intergenic -28927 NM_001159651 91272 Hs.425091 NM_138369 ENSG00000145919 BOD1 FAM44B biorientation of chromosomes in cell division 1 protein-coding chr11-677 chr11 111324038 111324248 + 18.3 0.000 Intergenic AluSc|SINE|Alu -19095 NM_001302644 399948 Hs.729225 NM_207429 COLCA1 C11orf92|CASC12|LOH11CR1F colorectal cancer associated 1 protein-coding chr10-783 chr10 48526412 48526622 + 18.3 0.000 intron (NR_144642, intron 3 of 9) intron (NR_144642, intron 3 of 9) -14928 NR_146782 100689073 Hs.667964 NR_146782 ARHGAP22-IT1 - ARHGAP22 intronic transcript 1 ncRNA chr8-1007 chr8 140920911 140921121 + 18.3 0.000 5' UTR (NM_001352697, exon 4 of 36) 5' UTR (NM_001352697, exon 4 of 36) 79988 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr3-940 chr3 127690233 127690443 + 18.3 0.000 3' UTR (NM_001256585, exon 7 of 7) 3' UTR (NM_001256585, exon 7 of 7) 17386 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr14-530 chr14 77707348 77707558 + 18.3 0.000 promoter-TSS (NM_001267864) promoter-TSS (NM_001267864) 570 NM_006020 8846 Hs.94542 NM_006020 ENSG00000100601 ALKBH1 ABH|ABH1|ALKBH|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding chr6-867 chr6 42193555 42193765 + 18.3 0.000 intron (NM_002098, intron 1 of 3) intron (NM_002098, intron 1 of 3) 1296 NM_002098 2979 Hs.446529 NM_002098 ENSG00000112599 GUCA1B GCAP 2|GCAP2|GUCA2|RP48 guanylate cyclase activator 1B protein-coding chr3-616 chr3 138187266 138187476 + 18.3 0.000 promoter-TSS (NM_001363942) promoter-TSS (NM_001363942) 70 NM_001363942 25852 Hs.744868 NM_014154 ENSG00000114098 ARMC8 GID5|HSPC056|S863-2|VID28 armadillo repeat containing 8 protein-coding chr22-373 chr22 27202691 27202901 + 18.3 0.000 Intergenic Intergenic 15280 NM_001318392 105372977 Hs.743180 NM_001318392 LOC105372977 - uncharacterized LOC105372977 protein-coding chr9-310 chr9 128689079 128689289 + 18.3 0.000 promoter-TSS (NM_003011) promoter-TSS (NM_003011) -38 NM_003011 6418 Hs.436687 NM_003011 ENSG00000119335 SET 2PP2A|I2PP2A|IGAAD|IPP2A2|MRD58|PHAPII|TAF-I|TAF-IBETA SET nuclear proto-oncogene protein-coding chr2-1446 chr2 238948031 238948241 + 18.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -21867 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr9-1697 chr9 97768822 97769032 + 18.3 0.000 intron (NR_147055, intron 5 of 10) Ricksha_0|DNA|MULE-MuDR -71518 NM_000380 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr13-441 chr13 32212522 32212732 + 18.3 0.000 intron (NM_023037, intron 35 of 60) intron (NM_023037, intron 35 of 60) 99327 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr7-2537 chr7 73453174 73453384 + 18.3 0.000 intron (NM_001370402, intron 13 of 18) intron (NM_001370402, intron 13 of 18) 19501 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr1-2526 chr1 877153 877363 + 18.3 0.000 promoter-TSS (NR_027055) promoter-TSS (NR_027055) -456 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr19-1346 chr19 31224345 31224555 + 18.3 0.000 intron (NR_138036, intron 2 of 4) intron (NR_138036, intron 2 of 4) 56940 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr11-743 chr11 68297673 68297883 + 18.3 0.000 Intergenic Intergenic -14813 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr4-800 chr4 39614784 39614994 + 18.3 0.000 intron (NM_001317896, intron 1 of 5) intron (NM_001317896, intron 1 of 5) 12232 NM_001317897 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr10-808 chr10 75111796 75112006 + 18.3 0.000 intron (NM_144660, intron 1 of 4) intron (NM_144660, intron 1 of 4) 245 NM_001174156 142891 Hs.744986 NM_144660 ENSG00000156671 SAMD8 HEL-177|SMSr sterile alpha motif domain containing 8 protein-coding chr22-668 chr22 46576323 46576533 + 18.3 0.000 promoter-TSS (NM_001366660) promoter-TSS (NM_001366660) -660 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr9-1004 chr9 86795899 86796109 + 18.3 0.000 Intergenic Intergenic 151502 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr1-1874 chr1 108746445 108746655 + 18.3 0.000 promoter-TSS (NM_007269) promoter-TSS (NM_007269) -124 NM_007269 6814 Hs.530436 NM_007269 ENSG00000116266 STXBP3 MUNC18-3|MUNC18C|PSP|UNC-18C syntaxin binding protein 3 protein-coding chrX-315 chrX 116380131 116380341 + 18.3 0.000 Intergenic Intergenic -56370 NM_007231 11254 Hs.522109 NM_007231 ENSG00000268104 SLC6A14 BMIQ11 solute carrier family 6 member 14 protein-coding chrX-105 chrX 154805376 154805586 + 18.3 0.000 promoter-TSS (NM_002436) promoter-TSS (NM_002436) 4 NM_001166460 4354 Hs.496984 NM_002436 ENSG00000130830 MPP1 AAG12|DXS552E|EMP55|MRG1|PEMP membrane palmitoylated protein 1 protein-coding chr1-2858 chr1 170967006 170967216 + 18.3 0.000 intron (NM_001163629, intron 7 of 21) intron (NM_001163629, intron 7 of 21) 31577 NM_025063 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding chr11-1299 chr11 27468270 27468480 + 18.3 0.000 intron (NM_018490, intron 1 of 17) intron (NM_018490, intron 1 of 17) -3356 NR_131169 105376671 Hs.568999 NR_131169 ENSG00000254862 LOC105376671 lnc-BBOX1-1 uncharacterized LOC105376671 ncRNA chr10-730 chr10 6203566 6203776 + 18.3 0.000 intron (NM_001314063, intron 1 of 15) CpG-2634 739 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr16-1321 chr16 1372599 1372809 + 18.3 0.000 intron (NR_160278, intron 10 of 15) intron (NR_160278, intron 10 of 15) 6948 NR_160279 64718 Hs.643536 NM_001037125 ENSG00000059145 UNKL C16orf28|ZC3H5L|ZC3HDC5L unk like zinc finger protein-coding chr6-1426 chr6 149317447 149317657 + 18.3 0.000 promoter-TSS (NM_015093) promoter-TSS (NM_015093) -160 NM_001292034 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr3-1184 chr3 186452564 186452774 + 18.3 0.000 Intergenic Intergenic 12324 NR_151708 107986164 Hs.131227 NR_151708 ENSG00000234548 LINC02020 - long intergenic non-protein coding RNA 2020 ncRNA chr13-329 chr13 77027244 77027454 + 18.3 0.000 promoter-TSS (NM_012158) promoter-TSS (NM_012158) -190 NM_012158 26224 Hs.508284 NM_012158 ENSG00000005812 FBXL3 FBL3|FBL3A|FBXL3A|IDDSFAS F-box and leucine rich repeat protein 3 protein-coding chr6-604 chr6 109009564 109009774 + 18.3 0.000 promoter-TSS (NM_001199934) promoter-TSS (NM_001199934) -114 NM_001199933 27244 Hs.591336 NM_014454 ENSG00000080546 SESN1 PA26|SEST1 sestrin 1 protein-coding chr13-548 chr13 111006724 111006934 + 18.3 0.000 Intergenic Intergenic 40802 NR_126378 104355135 Hs.649708 NR_126378 LINC00431 - long intergenic non-protein coding RNA 431 ncRNA chr12-1762 chr12 80778167 80778377 + 18.3 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 15118 NR_120469 101928420 Hs.739989 NR_120468 ENSG00000257741 LINC01490 - long intergenic non-protein coding RNA 1490 ncRNA chr1-1076 chr1 6701743 6701953 + 18.3 0.000 promoter-TSS (NM_018198) promoter-TSS (NM_018198) -32 NM_018198 55735 Hs.462640 NM_018198 ENSG00000007923 DNAJC11 dJ126A5.1 DnaJ heat shock protein family (Hsp40) member C11 protein-coding chr7-1173 chr7 12582042 12582252 + 18.3 0.000 intron (NR_156701, intron 3 of 14) MIR|SINE|MIR -7376 NM_033128 85477 Hs.633359 NM_033128 ENSG00000006747 SCIN - scinderin protein-coding chr13-530 chr13 23790900 23791110 + 18.3 0.000 intron (NM_005932, intron 16 of 18) L2|LINE|L2 -97863 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr6-805 chr6 35601524 35601734 + 18.3 0.000 intron (NM_001145775, intron 6 of 11) intron (NM_001145775, intron 6 of 11) 63160 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr12-1222 chr12 6202713 6202923 + 18.3 0.000 intron (NM_001769, intron 1 of 7) MIR3|SINE|MIR 2418 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr3-1087 chr3 172710084 172710294 + 18.3 0.000 intron (NM_001146276, intron 1 of 4) intron (NM_001146276, intron 1 of 4) 878 NM_001146276 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr11-1597 chr11 27013716 27013926 + 18.3 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 19709 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr8-411 chr8 73976181 73976391 + 18.3 0.000 promoter-TSS (NM_017866) promoter-TSS (NM_017866) 91 NM_017866 54968 Hs.106650 NM_017866 ENSG00000175606 TMEM70 MC5DN2 transmembrane protein 70 protein-coding chr11-2197 chr11 23976939 23977149 + 18.3 0.000 Intergenic Intergenic -520009 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr10-688 chr10 24706511 24706721 + 18.3 0.000 intron (NM_001367447, intron 2 of 24) intron (NM_001367447, intron 2 of 24) 16132 NM_001367454 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr2-711 chr2 105396899 105397109 + 18.3 0.000 intron (NM_001039492, intron 1 of 6) intron (NM_001039492, intron 1 of 6) 2047 NM_001450 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr1-1735 chr1 110309820 110310030 + 18.3 0.000 intron (NR_036595, intron 2 of 3) intron (NR_036595, intron 2 of 3) 29246 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 RBM15-AS1 AS-RBM15 RBM15 antisense RNA 1 ncRNA chr1-1803 chr1 156053035 156053245 + 18.3 0.000 intron (NM_001304342, intron 1 of 10) intron (NM_001304342, intron 1 of 10) 658 NM_001304342 56893 Hs.283739 NM_020131 ENSG00000160803 UBQLN4 A1U|A1Up|C1orf6|CIP75|UBIN ubiquilin 4 protein-coding chr2-2128 chr2 60756191 60756401 + 18.3 0.000 promoter-TSS (NM_022894) promoter-TSS (NM_022894) 28 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr6-1224 chr6 110952369 110952579 + 18.3 0.000 Intergenic LTR44|LTR|ERV1 -6232 NM_138408 112495 Hs.418520 NM_138408 ENSG00000155115 GTF3C6 C6orf51|TFIIIC35|bA397G5.3 general transcription factor IIIC subunit 6 protein-coding chr2-1683 chr2 122203658 122203868 + 18.3 0.000 Intergenic Intergenic 448112 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr6-1130 chr6 148414974 148415184 + 18.3 0.000 intron (NM_001346506, intron 2 of 20) intron (NM_001346506, intron 2 of 20) 72241 NM_001346506 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr18-69 chr18 32092425 32092635 + 18.3 0.000 promoter-TSS (NM_198128) promoter-TSS (NM_198128) -76 NM_001191324 51444 Hs.302408 NM_016271 ENSG00000134758 RNF138 HSD-4|NARF|STRIN|hNARF ring finger protein 138 protein-coding chr11-1090 chr11 199753 199963 + 18.3 0.000 intron (NM_053280, intron 6 of 6) intron (NM_053280, intron 6 of 6) 3097 NM_001286136 113746 Hs.350949 NM_053280 ENSG00000177947 ODF3 CT135|SHIPPO1|TISP50 outer dense fiber of sperm tails 3 protein-coding chr2-1587 chr2 95686518 95686728 + 18.3 0.000 Intergenic Intergenic 94622 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chr10-481 chr10 97633408 97633618 + 18.3 0.000 promoter-TSS (NM_178832) promoter-TSS (NM_178832) -13 NM_178832 118812 Hs.217409 NM_178832 ENSG00000171160 MORN4 C10orf83|UTA|bA548K23.4|rtp MORN repeat containing 4 protein-coding chr14-162 chr14 102362928 102363138 + 18.3 0.000 promoter-TSS (NM_001320046) promoter-TSS (NM_001320046) 92 NM_014844 9895 Hs.195667 NM_014844 ENSG00000196663 TECPR2 KIAA0329|SPG49 tectonin beta-propeller repeat containing 2 protein-coding chr11-1089 chr11 128548624 128548834 + 18.3 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 22587 NR_120581 101929517 Hs.562320 NR_120581 ENSG00000254588 ETS1-AS1 pancEts-1 ETS1 antisense RNA 1 ncRNA chr7-1224 chr7 121530385 121530595 + 18.3 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -134122 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr6-1021 chr6 106129569 106129779 + 18.3 0.000 Intergenic Intergenic 30733 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr18-473 chr18 56890862 56891072 + 18.3 0.000 intron (NM_015285, intron 21 of 27) intron (NM_015285, intron 21 of 27) 181152 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr19-888 chr19 7871495 7871705 + 18.3 0.000 exon (NM_001190467, exon 5 of 6) exon (NM_001190467, exon 5 of 6) 2790 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr1-3399 chr1 214477026 214477236 + 18.3 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 74471 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr13-465 chr13 33053597 33053807 + 18.3 0.000 intron (NM_004795, intron 1 of 4) intron (NM_004795, intron 1 of 4) 37279 NM_004795 9365 Hs.524953 NM_004795 ENSG00000133116 KL HFTC3 klotho protein-coding chr10-648 chr10 49484961 49485171 + 18.3 0.000 intron (NM_001346440, intron 8 of 20) intron (NM_001346440, intron 8 of 20) 39215 NM_170753 267004 Hs.49063 NM_170753 ENSG00000225830 PGBD3 - piggyBac transposable element derived 3 protein-coding chr14-835 chr14 67704618 67704828 + 18.3 0.000 intron (NM_152443, intron 1 of 8) intron (NM_152443, intron 1 of 8) 2837 NM_152443 145226 Hs.415322 NM_152443 ENSG00000139988 RDH12 LCA13|RP53|SDR7C2 retinol dehydrogenase 12 protein-coding chr18-630 chr18 12851802 12852012 + 18.3 0.000 intron (NM_080423, intron 2 of 8) L1MB1|LINE|L1 -10945 NM_001308287 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase non-receptor type 2 protein-coding chr12-644 chr12 7970697 7970907 + 18.3 0.000 Intergenic CpG -34615 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr1-5226 chr1 195538189 195538399 + 18.3 0.000 Intergenic Intergenic 550421 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr3-697 chr3 50155091 50155301 + 18.3 0.000 promoter-TSS (NM_004186) promoter-TSS (NM_004186) -128 NM_004186 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chr13-280 chr13 25287531 25287741 + 18.3 0.000 promoter-TSS (NM_004685) promoter-TSS (NM_004685) -148 NM_004685 9107 Hs.643702 NM_004685 ENSG00000139505 MTMR6 - myotubularin related protein 6 protein-coding chr7-775 chr7 73342711 73342921 + 18.3 0.000 exon (NM_003602, exon 8 of 9) exon (NM_003602, exon 8 of 9) 14655 NM_001281304 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr20-233 chr20 45971882 45972092 + 18.3 0.000 intron (NM_022095, intron 1 of 27) CpG-17795 216 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding chr14-860 chr14 50766367 50766577 + 18.3 0.000 intron (NM_016350, intron 13 of 28) intron (NM_016350, intron 13 of 28) -55325 NR_135258 105370489 Hs.569387 NR_135258 ENSG00000258843 LOC105370489 - uncharacterized LOC105370489 ncRNA chr7-1320 chr7 149776477 149776687 + 18.3 0.000 intron (NR_163594, intron 2 of 102) intron (NR_163594, intron 2 of 102) 540 NR_163594 23145 Hs.632022 NR_163594 ENSG00000197558 SSPO - SCO-spondin pseudo chr3-251 chr3 196503763 196503973 + 18.3 0.000 promoter-TSS (NM_152617) promoter-TSS (NM_152617) -100 NM_152617 165918 Hs.250648 NM_152617 ENSG00000163961 RNF168 hRNF168 ring finger protein 168 protein-coding chr7-2423 chr7 95205845 95206055 + 18.3 0.000 intron (NM_001166160, intron 7 of 19) intron (NM_001166160, intron 7 of 19) 118582 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr20-681 chr20 51742932 51743142 + 18.3 0.000 intron (NM_006045, intron 1 of 27) intron (NM_006045, intron 1 of 27) 25353 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr3-944 chr3 159928758 159928968 + 18.3 0.000 intron (NR_108088, intron 9 of 9) L2b|LINE|L2 -59972 NM_000882 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr5-1280 chr5 143494314 143494524 + 18.3 0.000 Intergenic Intergenic -58907 NM_001018077 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr12-1933 chr12 103909017 103909227 + 18.3 0.000 intron (NR_027249, intron 3 of 15) L2a|LINE|L2 21089 NR_027249 253724 Hs.506549 NR_027249 ENSG00000214198 TTC41P GNN|GNNP tetratricopeptide repeat domain 41, pseudogene pseudo chr1-758 chr1 39576841 39577051 + 18.3 0.000 promoter-TSS (NM_001135653) promoter-TSS (NM_001135653) -156 NM_003819 8761 Hs.169900 NM_003819 ENSG00000090621 PABPC4 APP-1|APP1|PABP4|iPABP poly(A) binding protein cytoplasmic 4 protein-coding chr16-526 chr16 2224035 2224245 + 18.3 0.000 intron (NM_001288778, intron 1 of 11) intron (NM_001288778, intron 1 of 11) 549 NM_004424 1877 Hs.513268 NM_004424 ENSG00000167967 E4F1 E4F E4F transcription factor 1 protein-coding chr4-819 chr4 125728687 125728897 + 18.3 0.000 Intergenic MIR|SINE|MIR 221533 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr13-209 chr13 21176395 21176605 + 18.3 0.000 promoter-TSS (NM_024026) promoter-TSS (NM_024026) 52 NM_145061 221150 Hs.88523 NM_145061 ENSG00000165480 SKA3 C13orf3|RAMA1 spindle and kinetochore associated complex subunit 3 protein-coding chrX-587 chrX 109698712 109698922 + 18.3 0.000 intron (NM_004458, intron 1 of 15) intron (NM_004458, intron 1 of 15) -33694 NR_158569 105373311 Hs.268785 NR_158569 LOC105373311 - uncharacterized LOC105373311 ncRNA chr2-1389 chr2 53033527 53033737 + 18.3 0.000 Intergenic L2|LINE|L2 -331017 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr9-1192 chr9 112556627 112556837 + 18.3 0.000 intron (NM_133465, intron 1 of 3) intron (NM_133465, intron 1 of 3) -69088 NM_001350649 100133204 Hs.662552 NM_001350649 C9orf147 - chromosome 9 open reading frame 147 protein-coding chr11-1127 chr11 62311147 62311357 + 18.3 0.000 Intergenic Intergenic -12177 NM_206998 404552 Hs.473247 NM_206998 ENSG00000197745 SCGB1D4 IIS secretoglobin family 1D member 4 protein-coding chr21-213 chr21 16794974 16795184 + 18.3 0.000 Intergenic Intergenic 204842 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr18-758 chr18 7575965 7576175 + 18.3 0.000 intron (NM_002845, intron 1 of 30) intron (NM_002845, intron 1 of 30) 8754 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr12-772 chr12 116525522 116525732 + 18.3 0.000 Intergenic Intergenic -7795 NR_027345 100287569 Hs.441601 NM_207436 ENSG00000196668 LINC00173 NCRNA00173 long intergenic non-protein coding RNA 173 ncRNA chr19-1289 chr19 56119549 56119759 + 18.3 0.000 intron (NM_001002836, intron 1 of 2) intron (NM_001002836, intron 1 of 2) 1641 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr20-447 chr20 33803989 33804199 + 18.3 0.000 intron (NR_110623, intron 1 of 3) intron (NR_110623, intron 1 of 3) 7005 NR_110623 101929746 Hs.504633 NR_110623 ENSG00000230753 ZNF341-AS1 - ZNF341 antisense RNA 1 ncRNA chr11-833 chr11 73307878 73308088 + 18.3 0.000 promoter-TSS (NM_014786) promoter-TSS (NM_014786) -293 NM_014786 9828 Hs.533719 NM_014786 ENSG00000110237 ARHGEF17 P164RHOGEF|RHOGEF17|TEM4|p164-RhoGEF Rho guanine nucleotide exchange factor 17 protein-coding chr2-1449 chr2 240981367 240981577 + 18.3 0.000 intron (NM_001351305, intron 27 of 31) intron (NM_001351305, intron 27 of 31) -14021 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr1-1525 chr1 82565419 82565629 + 18.3 0.000 Intergenic Intergenic -337659 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr20-213 chr20 40990652 40990862 + 18.3 0.000 intron (NR_145525, intron 1 of 2) intron (NR_145525, intron 1 of 2) 10044 NR_145524 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chrX-198 chrX 72307038 72307248 + 18.3 0.000 promoter-TSS (NM_001144886) promoter-TSS (NM_001144886) 14 NM_001144886 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr2-693 chr2 181457246 181457456 + 18.3 0.000 promoter-TSS (NM_000885) promoter-TSS (NM_000885) -35 NM_000885 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr11-512 chr11 3841446 3841656 + 18.3 0.000 promoter-TSS (NM_001665) promoter-TSS (NM_001665) -592 NM_001665 391 Hs.501728 NM_001665 ENSG00000177105 RHOG ARHG ras homolog family member G protein-coding chr5-1012 chr5 99061867 99062077 + 18.3 0.000 Intergenic LTR88c|LTR|Gypsy? -132258 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr5-873 chr5 177128896 177129106 + 18.3 0.000 Intergenic Intergenic -4078 NM_172349 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr11-1463 chr11 86477636 86477846 + 18.3 0.000 intron (NM_001014811, intron 6 of 13) intron (NM_001014811, intron 6 of 13) 102854 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr19-1098 chr19 52648049 52648259 + 18.3 0.000 intron (NM_001348018, intron 3 of 5) (CTTTT)n|Simple_repeat|Simple_repeat -9763 NM_001105549 55769 Hs.467210 NM_018300 ENSG00000167766 ZNF83 HPF1|ZNF816B zinc finger protein 83 protein-coding chr18-248 chr18 416265 416475 + 18.3 0.000 intron (NM_130386, intron 2 of 9) intron (NM_130386, intron 2 of 9) 84331 NM_130386 81035 Hs.464422 NM_030781 ENSG00000158270 COLEC12 CLP1|NSR2|SCARA4|SRCL collectin subfamily member 12 protein-coding chr4-599 chr4 139178559 139178769 + 18.3 0.000 Intergenic CpG-21506 -1446 NM_001371336 chr7-1480 chr7 122039084 122039294 + 18.3 0.000 intron (NM_001206839, intron 18 of 28) MIRc|SINE|MIR 105060 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr13-538 chr13 60156011 60156221 + 18.3 0.000 intron (NM_001258369, intron 1 of 26) MLT1D|LTR|ERVL-MaLR 7812 NM_001258366 81624 Hs.283127 NM_030932 ENSG00000139734 DIAPH3 AN|AUNA1|DIA2|DRF3|NSDAN|diap3|mDia2 diaphanous related formin 3 protein-coding chr9-945 chr9 131107429 131107639 + 18.3 0.000 intron (NM_001185095, intron 3 of 6) Charlie18a|DNA|hAT-Charlie 11003 NM_031426 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr19-1073 chr19 1432625 1432835 + 18.3 0.000 intron (NM_001352034, intron 11 of 11) intron (NM_001352034, intron 11 of 11) -5634 NM_001018 6209 Hs.406683 NM_001018 ENSG00000115268 RPS15 RIG|S15 ribosomal protein S15 protein-coding chr16-372 chr16 1379158 1379368 + 18.3 0.000 intron (NR_160278, intron 10 of 15) CpG 389 NR_160279 64718 Hs.643536 NM_001037125 ENSG00000059145 UNKL C16orf28|ZC3H5L|ZC3HDC5L unk like zinc finger protein-coding chr10-1069 chr10 125092995 125093205 + 18.3 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -60230 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr9-905 chr9 70683887 70684097 + 18.3 0.000 intron (NM_001366143, intron 8 of 25) intron (NM_001366143, intron 8 of 25) 126092 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr2-928 chr2 57981434 57981644 + 18.3 0.000 intron (NM_001288838, intron 1 of 15) L1PA15|LINE|L1 -65103 NM_001288836 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr11-1088 chr11 126840529 126840739 + 18.3 0.000 intron (NM_001301097, intron 1 of 15) MER44C|DNA|TcMar-Tigger -100112 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr3-2408 chr3 190382239 190382449 + 18.3 0.000 Intergenic Intergenic -5528 NM_006580 10686 Hs.251391 NM_006580 ENSG00000113946 CLDN16 HOMG3|PCLN1 claudin 16 protein-coding chr10-1090 chr10 44724818 44725028 + 18.3 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -186393 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr2-2193 chr2 42663097 42663307 + 18.3 0.000 intron (NM_001330444, intron 8 of 15) intron (NM_001330444, intron 8 of 15) 94570 NM_001330443 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr18-221 chr18 23780028 23780238 + 18.3 0.000 intron (NM_001127717, intron 11 of 73) intron (NM_001127717, intron 11 of 73) 90680 NM_001127717 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr10-743 chr10 101781033 101781243 + 18.3 0.000 promoter-TSS (NM_001206389) promoter-TSS (NM_001206389) -769 NM_001206389 2253 Hs.57710 NM_006119 ENSG00000107831 FGF8 AIGF|FGF-8|HBGF-8|HH6|KAL6 fibroblast growth factor 8 protein-coding chr6-1136 chr6 154758341 154758551 + 18.3 0.000 intron (NM_001286189, intron 3 of 21) L1MEf|LINE|L1 25068 NM_001286188 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr22-603 chr22 38554368 38554578 + 18.3 0.000 intron (NM_001363017, intron 6 of 11) intron (NM_001363017, intron 6 of 11) 13936 NM_001278208 11144 Hs.339396 NM_007068 ENSG00000100206 DMC1 DMC1H|LIM15|dJ199H16.1 DNA meiotic recombinase 1 protein-coding chr2-806 chr2 112726746 112726956 + 18.3 0.000 intron (NM_001350494, intron 15 of 16) intron (NM_001350494, intron 15 of 16) 5365 NM_001350494 284958 Hs.589714 NM_001350494 ENSG00000144130 NT5DC4 - 5'-nucleotidase domain containing 4 protein-coding chr3-1115 chr3 133301302 133301512 + 18.3 0.000 intron (NM_001282865, intron 2 of 3) intron (NM_001282865, intron 2 of 3) -44286 NR_110812 101927455 Hs.570550 NR_110812 ENSG00000251011 TMEM108-AS1 - TMEM108 antisense RNA 1 ncRNA chr6-504 chr6 139028606 139028816 + 18.3 0.000 promoter-TSS (NM_021243) promoter-TSS (NM_021243) -34 NM_021243 58527 Hs.600861 NM_021243 ENSG00000146386 ABRACL C6orf115|Costars|HSPC280|PRO2013 ABRA C-terminal like protein-coding chr9-1409 chr9 120985885 120986095 + 18.3 0.000 intron (NM_001735, intron 25 of 40) LTR38A1|LTR|ERV1 -33159 NR_148450 110599590 NR_148450 C5-OT1 C5T1LNCRNA C5 3' UTR overlapping transcript 1 ncRNA chr6-1371 chr6 74931662 74931872 + 18.3 0.000 Intergenic Intergenic 197015 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr9-1163 chr9 34446696 34446906 + 18.3 0.000 intron (NM_001184942, intron 1 of 5) L3|LINE|CR1 11769 NM_001184941 203259 Hs.493771 NM_147202 ENSG00000164970 FAM219A C9orf25 family with sequence similarity 219 member A protein-coding chr8-1569 chr8 124525815 124526025 + 18.3 0.000 intron (NM_001317889, intron 1 of 12) LTR56|LTR|ERV1 13165 NM_032026 83940 Hs.170568 NM_032026 ENSG00000147687 TATDN1 CDA11 TatD DNase domain containing 1 protein-coding chr10-486 chr10 6204360 6204570 + 18.3 0.000 intron (NM_001314063, intron 1 of 15) CpG-2634 1533 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr1-2031 chr1 165398036 165398246 + 18.3 0.000 Intergenic Intergenic 26843 NM_001256571 6258 Hs.26550 NM_006917 ENSG00000143171 RXRG NR2B3|RXRC retinoid X receptor gamma protein-coding chr3-1147 chr3 49950272 49950482 + 18.3 0.000 intron (NM_001349194, intron 1 of 17) SSU-rRNA_Hsa|rRNA|rRNA 10227 NM_001349190 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr9-818 chr9 33250718 33250928 + 18.3 0.000 Intergenic Intergenic 10656 NM_014471 27290 Hs.555934 NM_014471 ENSG00000122711 SPINK4 HEL136|PEC-60|PEC60 serine peptidase inhibitor, Kazal type 4 protein-coding chr10-1047 chr10 68472143 68472353 + 18.3 0.000 promoter-TSS (NR_102264) promoter-TSS (NR_102264) -127 NR_102264 1763 Hs.532446 NM_001080449 ENSG00000138346 DNA2 DNA2L|hDNA2 DNA replication helicase/nuclease 2 protein-coding chr3-1217 chr3 65348764 65348974 + 18.3 0.000 Intergenic L2a|LINE|L2 -544947 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr1-1106 chr1 203674238 203674448 + 18.3 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 46406 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr13-595 chr13 27826498 27826708 + 18.3 0.000 intron (NR_047484, intron 3 of 4) intron (NR_047484, intron 3 of 4) 34120 NM_145657 219409 Hs.351785 NM_145657 ENSG00000169840 GSX1 GSH1|Gsh-1 GS homeobox 1 protein-coding chr3-1540 chr3 188649510 188649720 + 18.3 0.000 intron (NM_005578, intron 6 of 10) intron (NM_005578, intron 6 of 10) -39166 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr10-2497 chr10 34584168 34584378 + 18.3 0.000 intron (NM_001184789, intron 2 of 22) intron (NM_001184789, intron 2 of 22) 231023 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr2-554 chr2 231666498 231666708 + 18.3 0.000 Intergenic Intergenic -41922 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr3-1079 chr3 144257465 144257675 + 18.3 0.000 Intergenic Intergenic 284489 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr1-1531 chr1 150192114 150192324 + 18.3 0.000 Intergenic Intergenic 31491 NR_135098 105371433 Hs.599366 NR_135098 LOC105371433 - uncharacterized LOC105371433 ncRNA chr6-1099 chr6 88650424 88650634 + 18.3 0.000 intron (NM_001286428, intron 12 of 13) intron (NM_001286428, intron 12 of 13) -111160 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr10-237 chr10 86756393 86756603 + 18.3 0.000 promoter-TSS (NM_004329) promoter-TSS (NM_004329) -141 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr16-739 chr16 11345356 11345566 + 18.3 0.000 promoter-TSS (NR_135174) promoter-TSS (NR_135174) 2 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr10-2065 chr10 99630477 99630687 + 18.3 0.000 Intergenic Intergenic -10143 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding chr3-793 chr3 142724661 142724871 + 18.3 0.000 intron (NM_001251845, intron 1 of 12) CpG 342 NM_003304 7220 Hs.250687 NM_003304 ENSG00000144935 TRPC1 HTRP-1|TRP1 transient receptor potential cation channel subfamily C member 1 protein-coding chr11-1124 chr11 44244940 44245150 + 18.3 0.000 3' UTR (NM_001178083, exon 15 of 15) 3' UTR (NM_001178083, exon 15 of 15) 65094 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr4-1646 chr4 95129907 95130117 + 18.3 0.000 exon (NM_001203, exon 9 of 13) exon (NM_001203, exon 9 of 13) 38521 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr2-860 chr2 113283938 113284148 + 18.3 0.000 Intergenic Intergenic -5122 NM_013992 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr1-1143 chr1 234610806 234611016 + 18.3 0.000 Intergenic CpG -1386 NM_182972 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr3-794 chr3 148955797 148956007 + 18.3 0.000 Intergenic Intergenic -35506 NM_001184721 2992 Hs.477892 NM_004130 ENSG00000163754 GYG1 GSD15|GYG glycogenin 1 protein-coding chr22-875 chr22 40238543 40238753 + 18.3 0.000 intron (NM_015088, intron 1 of 20) L2a|LINE|L2 60723 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr15-264 chr15 41544094 41544304 + 18.3 0.000 promoter-TSS (NM_015540) promoter-TSS (NM_015540) 58 NM_015540 26015 Hs.371045 NM_015540 ENSG00000103932 RPAP1 - RNA polymerase II associated protein 1 protein-coding chr4-908 chr4 141307316 141307526 + 18.3 0.000 Intergenic Intergenic 25196 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr15-532 chr15 69403598 69403808 + 18.3 0.000 exon (NM_017705, exon 9 of 9) exon (NM_017705, exon 9 of 9) -10646 NM_138555 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr20-382 chr20 38201452 38201662 + 18.3 0.000 Intergenic Intergenic -35049 NM_001323316 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr4-484 chr4 87108124 87108334 + 18.3 0.000 exon (NM_001313959, exon 10 of 20) exon (NM_001313959, exon 10 of 20) 101228 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr12-676 chr12 21437510 21437720 + 18.3 0.000 promoter-TSS (NM_024854) promoter-TSS (NM_024854) -40 NM_024854 79912 Hs.709545 NM_024854 ENSG00000121350 PYROXD1 MFM8 pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding chr10-424 chr10 125145239 125145449 + 18.3 0.000 intron (NM_001290214, intron 1 of 10) intron (NM_001290214, intron 1 of 10) 13433 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr18-315 chr18 70133093 70133303 + 18.3 0.000 intron (NM_001318520, intron 22 of 47) LTR87|LTR|ERVL? 72489 NM_173630 25914 Hs.654809 NM_173630 ENSG00000176225 RTTN MSSP rotatin protein-coding chr12-618 chr12 124861512 124861722 + 18.3 0.000 intron (NR_160424, intron 1 of 11) intron (NR_160424, intron 1 of 11) 2247 NR_160420 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr6-501 chr6 134166658 134166868 + 18.3 0.000 Intergenic Intergenic 8103 NM_001291995 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr14-608 chr14 61506139 61506349 + 18.3 0.000 intron (NM_006255, intron 10 of 13) intron (NM_006255, intron 10 of 13) 63950 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr7-1455 chr7 82442869 82443079 + 18.3 0.000 intron (NM_000722, intron 1 of 38) CpG 803 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr10-841 chr10 131962086 131962296 + 18.3 0.000 Intergenic Intergenic 19822 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr20-464 chr20 25328016 25328226 + 18.3 0.000 intron (NM_001042472, intron 2 of 12) intron (NM_001042472, intron 2 of 12) 62714 NM_001042472 26090 Hs.441550 NM_015600 ENSG00000100997 ABHD12 ABHD12A|BEM46L2|C20orf22|PHARC|dJ965G21.2|hABHD12 abhydrolase domain containing 12 protein-coding chr6-297 chr6 166342529 166342739 + 18.1 0.000 promoter-TSS (NM_145169) promoter-TSS (NM_145169) 3 NR_040022 100289495 NR_040022 LOC100289495 - uncharacterized LOC100289495 ncRNA chr5-1022 chr5 133051895 133052105 + 18.1 0.000 promoter-TSS (NM_002154) promoter-TSS (NM_002154) -13 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr19-1091 chr19 42184493 42184703 + 18.1 0.000 Intergenic Intergenic 33079 NR_073050 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr17-1259 chr17 40180124 40180334 + 18.1 0.000 intron (NM_016339, intron 1 of 14) intron (NM_016339, intron 1 of 14) 2759 NM_016339 51195 Hs.632254 NM_016339 ENSG00000108352 RAPGEFL1 Link-GEFII Rap guanine nucleotide exchange factor like 1 protein-coding chr6-533 chr6 45328205 45328415 + 18.1 0.000 promoter-TSS (NM_001024630) promoter-TSS (NM_001024630) -7 NM_001015051 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr10-790 chr10 93999580 93999790 + 18.1 0.000 intron (NM_001288989, intron 1 of 32) intron (NM_001288989, intron 1 of 32) 5754 NM_001288989 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr8-391 chr8 93740910 93741120 + 18.1 0.000 promoter-TSS (NM_203390) promoter-TSS (NM_203390) -6 NM_203390 389677 Hs.606916 NM_203390 ENSG00000183808 RBM12B MGC:33837 RNA binding motif protein 12B protein-coding chr11-2011 chr11 58867685 58867895 + 18.1 0.000 Intergenic Intergenic -23086 NM_145016 219970 Hs.254271 NM_145016 ENSG00000156689 GLYATL2 BXMAS2-10|GATF-B glycine-N-acyltransferase like 2 protein-coding chr22-535 chr22 42645263 42645473 + 18.1 0.000 promoter-TSS (NM_001171660) promoter-TSS (NM_001171660) -734 NM_001171660 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr2-1580 chr2 69014607 69014817 + 18.1 0.000 intron (NM_032208, intron 1 of 17) intron (NM_032208, intron 1 of 17) 1568 NM_053034 84168 Hs.165859 NM_018153 ENSG00000169604 ANTXR1 ATR|GAPO|TEM8 ANTXR cell adhesion molecule 1 protein-coding chr17-699 chr17 8210622 8210832 + 18.1 0.000 promoter-TSS (NM_004217) promoter-TSS (NM_004217) -152 NM_001256834 9212 Hs.442658 NM_004217 ENSG00000178999 AURKB AIK2|AIM-1|AIM1|ARK-2|ARK2|AurB|IPL1|PPP1R48|STK-1|STK12|STK5|aurkb-sv1|aurkb-sv2 aurora kinase B protein-coding chr4-1288 chr4 85796817 85797027 + 18.1 0.000 intron (NM_001346093, intron 1 of 6) LTR41|LTR|ERVL 18124 NM_001042669 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr13-344 chr13 51896397 51896607 + 18.1 0.000 Intergenic Intergenic 34533 NM_001346075 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr7-1513 chr7 12475743 12475953 + 18.1 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -20581 NR_136261 102725191 Hs.602382 NR_136261 ENSG00000226690 LOC102725191 - uncharacterized LOC102725191 ncRNA chr20-423 chr20 54132803 54133013 + 18.1 0.000 Intergenic Intergenic 41078 NM_001128915 1591 Hs.89663 NM_000782 ENSG00000019186 CYP24A1 CP24|CYP24|HCAI|HCINF1|P450-CC24 cytochrome P450 family 24 subfamily A member 1 protein-coding chr16-1225 chr16 88063529 88063739 + 18.1 0.000 intron (NM_001173539, intron 11 of 12) intron (NM_001173539, intron 11 of 12) 37351 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr7-1623 chr7 18685980 18686190 + 18.1 0.000 intron (NM_058176, intron 11 of 22) MIR3|SINE|MIR 176815 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr1-2370 chr1 79128789 79128999 + 18.1 0.000 Intergenic Intergenic -122164 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr9-1680 chr9 83544368 83544578 + 18.1 0.000 Intergenic L1PA15-16|LINE|L1 -6072 NM_174938 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr5-1968 chr5 119393869 119394079 + 18.1 0.000 3' UTR (NM_001286814, exon 2 of 2) 3' UTR (NM_001286814, exon 2 of 2) 37955 NM_014350 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr3-576 chr3 133805658 133805868 + 18.1 0.000 promoter-TSS (NR_163491) promoter-TSS (NR_163491) -52 NR_163491 58477 Hs.12152 NM_021203 ENSG00000144867 SRPRB APMCF1|SR-beta SRP receptor subunit beta protein-coding chr5-870 chr5 171954486 171954696 + 18.1 0.000 intron (NM_033644, intron 1 of 12) intron (NM_033644, intron 1 of 12) 52282 NM_033645 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr3-1539 chr3 188234317 188234527 + 18.1 0.000 intron (NM_005578, intron 2 of 10) MER117|DNA|hAT-Charlie 9017 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr4-755 chr4 666126 666336 + 18.1 0.000 intron (NM_000283, intron 19 of 21) intron (NM_000283, intron 19 of 21) 8045 NR_033743 521 Hs.85539 NM_007100 ENSG00000169020 ATP5ME ATP5I|ATP5K ATP synthase membrane subunit e protein-coding chr1-1442 chr1 184118178 184118388 + 18.1 0.000 Intergenic Intergenic 66553 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr10-2026 chr10 72765154 72765364 + 18.1 0.000 intron (NR_073062, intron 3 of 9) intron (NR_073062, intron 3 of 9) 44230 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr13-483 chr13 87829492 87829702 + 18.1 0.000 Intergenic Intergenic -19077 NR_104059 101930749 Hs.539610 NR_104059 ENSG00000223404 LINC00397 - long intergenic non-protein coding RNA 397 ncRNA chr20-767 chr20 39800610 39800820 + 18.1 0.000 Intergenic Intergenic -203746 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr1-1369 chr1 39829992 39830202 + 18.1 0.000 Intergenic L2c|LINE|L2 41121 NR_135805 101929536 Hs.552820 NR_135805 ENSG00000261798 LOC101929536 - uncharacterized LOC101929536 ncRNA chr12-704 chr12 56196998 56197208 + 18.1 0.000 Intergenic Intergenic -7620 NM_003075 6601 Hs.236030 NM_003075 ENSG00000139613 SMARCC2 BAF170|CRACC2|CSS8|Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 protein-coding chr13-328 chr13 72256010 72256220 + 18.1 0.000 Intergenic Intergenic -388911 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr5-499 chr5 172766664 172766874 + 18.1 0.000 Intergenic Intergenic 4426 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr1-929 chr1 155002278 155002488 + 18.1 0.000 promoter-TSS (NM_001256455) promoter-TSS (NM_001256455) -247 NR_045515 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr14-615 chr14 102555489 102555699 + 18.1 0.000 non-coding (NR_146561, exon 3 of 3) non-coding (NR_146561, exon 3 of 3) 10340 NR_146561 105370681 NR_146561 ENSG00000259230 LINC02323 - long intergenic non-protein coding RNA 2323 ncRNA chr10-788 chr10 79904810 79905020 + 18.1 0.000 promoter-TSS (NR_033857) promoter-TSS (NR_033857) 17 NR_033857 100288974 Hs.733579 NR_033857 BMS1P21 - BMS1 pseudogene 21 pseudo chr6-1776 chr6 84027960 84028170 + 18.1 0.000 Intergenic Intergenic -5707 NM_001346541 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr8-700 chr8 47826746 47826956 + 18.1 0.000 exon (NM_006904, exon 63 of 86) exon (NM_006904, exon 63 of 86) -88687 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr19-788 chr19 2163787 2163997 + 18.1 0.000 promoter-TSS (NM_032482) promoter-TSS (NM_032482) -41 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr8-664 chr8 30128115 30128325 + 18.1 0.000 intron (NM_001128208, intron 3 of 3) intron (NM_001128208, intron 3 of 3) 16445 NM_001100916 619373 Hs.627194 NM_001100916 ENSG00000177669 MBOAT4 FKSG89|GOAT|OACT4 membrane bound O-acyltransferase domain containing 4 protein-coding chr10-1883 chr10 103244767 103244977 + 18.1 0.000 Intergenic Intergenic -1015 NM_001143909 729020 Hs.458437 NM_001143909 ENSG00000235376 RPEL1 - ribulose-5-phosphate-3-epimerase like 1 protein-coding chr3-1171 chr3 143314580 143314790 + 18.1 0.000 intron (NM_173653, intron 14 of 15) intron (NM_173653, intron 14 of 15) -27561 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr19-635 chr19 4723780 4723990 + 18.1 0.000 promoter-TSS (NR_158699) promoter-TSS (NR_158699) -43 NR_158699 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr18-191 chr18 9417062 9417272 + 18.1 0.000 Intergenic Intergenic -58346 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr22-335 chr22 40410277 40410487 + 18.1 0.000 TTS (NM_015705) TTS (NM_015705) 39788 NM_001350047 27352 Hs.474914 NM_015705 ENSG00000100359 SGSM3 CIP85|MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5|rabGAPLP small G protein signaling modulator 3 protein-coding chr19-1856 chr19 16608295 16608505 + 18.1 0.000 intron (NM_004831, intron 1 of 2) MER63D|DNA|hAT-Blackjack 19804 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr8-363 chr8 26577771 26577981 + 18.1 0.000 promoter-TSS (NM_001386) promoter-TSS (NM_001386) -69 NM_001386 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr22-593 chr22 27170458 27170668 + 18.1 0.000 Intergenic Intergenic -16953 NM_001318392 105372977 Hs.743180 NM_001318392 LOC105372977 - uncharacterized LOC105372977 protein-coding chr20-854 chr20 57351176 57351386 + 18.1 0.000 promoter-TSS (NM_001015885) promoter-TSS (NM_001015885) 26 NM_003610 8480 Hs.371698 NM_003610 ENSG00000101146 RAE1 Gle2|MIG14|MRNP41|Mnrp41|dJ481F12.3|dJ800J21.1 ribonucleic acid export 1 protein-coding chr3-932 chr3 70989273 70989483 + 18.1 0.000 intron (NR_146142, intron 12 of 19) intron (NR_146142, intron 12 of 19) 75546 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr16-752 chr16 10609316 10609526 + 18.1 0.000 Intergenic Intergenic -28823 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr6-826 chr6 135358171 135358381 + 18.1 0.000 intron (NM_017651, intron 22 of 27) intron (NM_017651, intron 22 of 27) 119116 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr6-871 chr6 53986251 53986461 + 18.1 0.000 intron (NR_125842, intron 2 of 3) intron (NR_125842, intron 2 of 3) -12534 NR_046832 100874282 Hs.571169 NR_046832 ENSG00000236996 MLIP-IT1 - MLIP intronic transcript 1 ncRNA chr11-937 chr11 86632855 86633065 + 18.1 0.000 intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 39238 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr2-2117 chr2 33476482 33476692 + 18.1 0.000 promoter-TSS (NM_001139488) promoter-TSS (NM_001139488) -62 NM_001349977 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding chr9-546 chr9 137045569 137045779 + 18.1 0.000 intron (NM_015392, intron 1 of 8) CpG 503 NM_015392 56654 Hs.719906 NM_015392 ENSG00000107281 NPDC1 CAB|CAB-|CAB-1|CAB1|NPDC-1 neural proliferation, differentiation and control 1 protein-coding chr6-1916 chr6 36462160 36462370 + 18.1 0.000 intron (NR_104481, intron 1 of 3) intron (NR_104481, intron 1 of 3) 19265 NM_001286579 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr11-924 chr11 6469164 6469374 + 18.1 0.000 intron (NM_001248006, intron 1 of 11) intron (NM_001248006, intron 1 of 11) 4672 NM_033278 10612 Hs.591992 NM_006458 ENSG00000110171 TRIM3 BERP|HAC1|RNF22|RNF97 tripartite motif containing 3 protein-coding chr11-650 chr11 108664830 108665040 + 18.1 0.000 promoter-TSS (NM_004398) promoter-TSS (NM_004398) -134 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr16-1304 chr16 87017506 87017716 + 18.1 0.000 Intergenic Intergenic -40173 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr5-1043 chr5 178078170 178078380 + 18.1 0.000 Intergenic L2|LINE|L2 -35257 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr1-3044 chr1 6599076 6599286 + 18.1 0.000 exon (NM_014851, exon 2 of 4) exon (NM_014851, exon 2 of 4) 3688 NM_014851 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr1-1780 chr1 32681649 32681859 + 18.1 0.000 3' UTR (NM_001161708, exon 4 of 4) 3' UTR (NM_001161708, exon 4 of 4) 21016 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr12-1633 chr12 121720220 121720430 + 18.1 0.000 intron (NM_001080825, intron 1 of 11) intron (NM_001080825, intron 1 of 11) 7573 NM_001080825 144404 Hs.644504 NM_001080825 ENSG00000188735 TMEM120B - transmembrane protein 120B protein-coding chr3-546 chr3 54067183 54067393 + 18.1 0.000 Intergenic Intergenic -55264 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr1-753 chr1 6485809 6486019 + 18.1 0.000 promoter-TSS (NM_001265593) promoter-TSS (NM_001265593) 40 NM_001042665 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr17-1556 chr17 7858567 7858777 + 18.1 0.000 promoter-TSS (NM_001320924) promoter-TSS (NM_001320924) 669 NM_001330110 124637 Hs.27475 NM_144607 ENSG00000182224 CYB5D1 - cytochrome b5 domain containing 1 protein-coding chr5-891 chr5 142246126 142246336 + 18.1 0.000 Intergenic Intergenic 72091 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr4-1339 chr4 168751831 168752041 + 18.1 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -80159 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr9-907 chr9 82488813 82489023 + 18.1 0.000 Intergenic Intergenic 500146 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr7-1481 chr7 123615396 123615606 + 18.1 0.000 intron (NR_111922, intron 3 of 4) intron (NR_111922, intron 3 of 4) 6478 NM_080928 142685 Hs.83916 NM_080928 ENSG00000146809 ASB15 - ankyrin repeat and SOCS box containing 15 protein-coding chr16-668 chr16 56988271 56988481 + 18.1 0.000 Intergenic MIR|SINE|MIR -1181 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr19-711 chr19 12957038 12957248 + 18.1 0.000 promoter-TSS (NM_052850) promoter-TSS (NM_052850) 80 NM_052850 90480 Hs.515164 NM_052850 ENSG00000179271 GADD45GIP1 CKBBP2|CKbetaBP2|CRIF1|MRP-L59|PLINP|PLINP-1|PRG6|Plinp1 GADD45G interacting protein 1 protein-coding chr10-410 chr10 132611968 132612178 + 18.1 0.000 intron (NM_005539, intron 2 of 15) intron (NM_005539, intron 2 of 15) -69202 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr3-660 chr3 129120795 129121005 + 18.1 0.000 intron (NM_001204890, intron 11 of 12) intron (NM_001204890, intron 11 of 12) 904 NM_001204887 339122 Hs.381132 NM_198490 ENSG00000172780 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding chr2-1159 chr2 171304492 171304702 + 18.1 0.000 Intergenic Intergenic -73304 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr8-392 chr8 96235576 96235786 + 18.1 0.000 promoter-TSS (NM_006294) promoter-TSS (NM_006294) -47 NM_001199975 7381 Hs.131255 NM_006294 ENSG00000156467 UQCRB MC3DN3|QCR7|QP-C|QPC|UQBC|UQBP|UQCR6|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding chr8-512 chr8 119855730 119855940 + 18.1 0.000 promoter-TSS (NM_024094) promoter-TSS (NM_024094) 59 NM_024094 79075 Hs.315167 NM_024094 ENSG00000136982 DSCC1 DCC1 DNA replication and sister chromatid cohesion 1 protein-coding chr7-601 chr7 101321607 101321817 + 18.1 0.000 promoter-TSS (NM_001287525) promoter-TSS (NM_001287525) 100 NM_001287525 64792 Hs.389104 NM_022777 ENSG00000128581 IFT22 RABL5 intraflagellar transport 22 protein-coding chr13-1033 chr13 66424436 66424646 + 18.1 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) 206291 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr10-587 chr10 74113827 74114037 + 18.1 0.000 intron (NM_014000, intron 19 of 21) (TC)n|Simple_repeat|Simple_repeat 36896 NR_135191 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr16-564 chr16 86567276 86567486 + 18.1 0.000 exon (NM_005251, exon 1 of 1) exon (NM_005251, exon 1 of 1) 380 NR_125795 103752587 Hs.609366 NR_125795 ENSG00000260944 FOXC2-AS1 ODRUL FOXC2 antisense RNA 1 ncRNA chr7-823 chr7 43522612 43522822 + 18.1 0.000 promoter-TSS (NR_038276) promoter-TSS (NR_038276) -175 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr8-614 chr8 75698191 75698401 + 18.1 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 158328 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr17-1112 chr17 4678529 4678739 + 18.1 0.000 intron (NM_014389, intron 5 of 16) intron (NM_014389, intron 5 of 16) 25503 NM_001278241 27043 Hs.744899 NM_014389 ENSG00000141456 PELP1 MNAR|P160 proline, glutamate and leucine rich protein 1 protein-coding chr3-1823 chr3 54954577 54954787 + 18.1 0.000 intron (NM_001304389, intron 1 of 2) intron (NM_001304389, intron 1 of 2) 12420 NM_001304389 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr17-2201 chr17 78001253 78001463 + 18.1 0.000 Intergenic Intergenic -2879 NM_018996 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr5-1411 chr5 158875433 158875643 + 18.1 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 222418 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr10-1224 chr10 36114979 36115189 + 18.1 0.000 Intergenic Intergenic 336782 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chrX-241 chrX 153495320 153495530 + 18.1 0.000 promoter-TSS (NR_073156) promoter-TSS (NR_073156) 40 NR_073156 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr22-1010 chr22 20380320 20380530 + 18.1 0.000 Intergenic Intergenic -13690 NM_001256524 7625 Hs.517418 NM_003426 ENSG00000185252 ZNF74 COS52|ZFP520|ZNF520|hZNF7 zinc finger protein 74 protein-coding chr22-1428 chr22 44208286 44208496 + 18.1 0.000 TTS (NM_001137605) TTS (NM_001137605) 27466 NM_022141 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr1-1895 chr1 183943016 183943226 + 18.1 0.000 intron (NM_015101, intron 10 of 11) intron (NM_015101, intron 10 of 11) 94607 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr2-961 chr2 190534602 190534812 + 18.1 0.000 promoter-TSS (NM_001142645) promoter-TSS (NM_001142645) 15 NR_136298 100131211 Hs.659824 NM_001142645 ENSG00000189362 NEMP2 TMEM194B nuclear envelope integral membrane protein 2 protein-coding chr17-327 chr17 44218485 44218695 + 18.1 0.000 intron (NR_045058, intron 1 of 20) CpG 1085 NM_001076684 7343 Hs.89781 NM_014233 ENSG00000108312 UBTF CONDBA|NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor protein-coding chr2-3020 chr2 61181599 61181809 + 18.1 0.000 intron (NR_152210, intron 2 of 5) MIRb|SINE|MIR 4286 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr12-503 chr12 48106077 48106287 + 18.1 0.000 promoter-TSS (NM_001267594) promoter-TSS (NM_001267594) 66 NM_001354738 5213 Hs.75160 NM_000289 ENSG00000152556 PFKM ATP-PFK|GSD7|PFK-1|PFK-A|PFK1|PFKA|PFKX|PPP1R122 phosphofructokinase, muscle protein-coding chr7-1098 chr7 5643368 5643578 + 18.1 0.000 intron (NM_207111, intron 14 of 16) intron (NM_207111, intron 14 of 16) 36988 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr2-2135 chr2 105886092 105886302 + 18.1 0.000 intron (NM_001004720, intron 3 of 3) intron (NM_001004720, intron 3 of 3) 34350 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr15-620 chr15 43106079 43106289 + 18.1 0.000 promoter-TSS (NM_174916) promoter-TSS (NM_174916) -146 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr1-2618 chr1 92960420 92960630 + 18.1 0.000 intron (NM_001006605, intron 1 of 4) MamSINE1|SINE|tRNA-RTE 937 NM_001006605 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr13-924 chr13 72983185 72983395 + 18.1 0.000 intron (NM_006346, intron 16 of 17) AluJr|SINE|Alu -71686 NM_001286818 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr10-796 chr10 115052305 115052515 + 18.1 0.000 Intergenic Intergenic -40955 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr3-798 chr3 184289583 184289793 + 18.1 0.000 exon (NM_001100120, exon 13 of 19) exon (NM_001100120, exon 13 of 19) -9553 NM_002808 5708 Hs.518464 NM_002808 ENSG00000175166 PSMD2 P97|RPN1|S2|TRAP2 proteasome 26S subunit, non-ATPase 2 protein-coding chr10-789 chr10 92571744 92571954 + 18.1 0.000 intron (NM_001322795, intron 1 of 25) intron (NM_001322795, intron 1 of 25) 1657 NM_001322796 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr10-1299 chr10 48589398 48589608 + 18.1 0.000 intron (NM_001347738, intron 2 of 10) L2|LINE|L2 15570 NR_144642 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chrX-433 chrX 51876506 51876716 + 18.1 0.000 intron (NM_001005332, intron 1 of 12) LTR78B|LTR|ERV1 -17012 NM_001005333 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr1-1055 chr1 150974752 150974962 + 18.1 0.000 promoter-TSS (NM_022075) promoter-TSS (NM_022075) -22 NM_022075 29956 Hs.744017 NM_013384 ENSG00000143418 CERS2 L3|LASS2|SP260|TMSG1 ceramide synthase 2 protein-coding chr5-1183 chr5 56950780 56950990 + 18.1 0.000 intron (NM_001297598, intron 1 of 12) CpG 1245 NM_001297599 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr22-608 chr22 45105598 45105808 + 18.1 0.000 Intergenic L1MB7|LINE|L1 46881 NR_038957 100506714 Hs.189902 NR_038956 NUP50-DT NUP50-AS1 NUP50 divergent transcript ncRNA chr1-1462 chr1 27572730 27572940 + 18.1 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 30659 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr5-826 chr5 15757105 15757315 + 18.1 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -142208 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr17-1514 chr17 50210302 50210512 + 18.1 0.000 Intergenic Intergenic -4287 NR_110806 101927230 Hs.514326 NR_110806 LINC01969 - long intergenic non-protein coding RNA 1969 ncRNA chr3-1607 chr3 4898594 4898804 + 18.1 0.000 non-coding (NR_125914, exon 3 of 3) non-coding (NR_125914, exon 3 of 3) 7802 NR_125914 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr11-2433 chr11 29129999 29130209 + 18.1 0.000 Intergenic Intergenic -464309 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr15-987 chr15 63332729 63332939 + 18.1 0.000 intron (NM_001218, intron 8 of 10) L2c|LINE|L2 49012 NR_135511 771 Hs.210995 NM_001218 ENSG00000074410 CA12 CA-XII|CAXII|HsT18816|T18816 carbonic anhydrase 12 protein-coding chr12-914 chr12 25615162 25615372 + 18.1 0.000 intron (NM_001352232, intron 1 of 10) L3b|LINE|CR1 33311 NM_001352232 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr20-530 chr20 38427081 38427291 + 18.1 0.000 TTS (NR_002911) TTS (NR_002911) 257 NR_002911 26777 Hs.681779 NR_002911 ENSG00000225091 SNORA71A RNU71A|U71a small nucleolar RNA, H/ACA box 71A snoRNA chr10-623 chr10 4069559 4069769 + 18.1 0.000 intron (NR_120632, intron 1 of 3) L2a|LINE|L2 17938 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA chr9-1151 chr9 6877993 6878203 + 18.1 0.000 intron (NR_148680, intron 5 of 21) intron (NR_148680, intron 5 of 21) 120748 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr6-559 chr6 118895018 118895228 + 18.1 0.000 intron (NM_014034, intron 1 of 3) CpG 971 NM_014034 25842 Hs.292316 NM_014034 ENSG00000111875 ASF1A CGI-98|CIA|HSPC146 anti-silencing function 1A histone chaperone protein-coding chr10-884 chr10 87589700 87589910 + 18.1 0.000 Intergenic Intergenic -70073 NM_004670 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr7-871 chr7 93092835 93093045 + 18.1 0.000 Intergenic L1M1|LINE|L1 25039 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding chr14-328 chr14 77642056 77642266 + 18.1 0.000 Intergenic CpG -25394 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr9-618 chr9 68779886 68780096 + 18.1 0.000 promoter-TSS (NM_138333) promoter-TSS (NM_138333) -74 NM_138333 116224 Hs.655572 NM_138333 ENSG00000187866 FAM122A C9orf42 family with sequence similarity 122A protein-coding chr7-1426 chr7 41696347 41696557 + 18.1 0.000 intron (NR_027118, intron 1 of 3) intron (NR_027118, intron 1 of 3) 2533 NR_027118 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr11-1406 chr11 14374368 14374578 + 18.1 0.000 Intergenic Intergenic -9967 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr8-623 chr8 143499453 143499663 + 18.1 0.000 intron (NM_015117, intron 4 of 11) intron (NM_015117, intron 4 of 11) 6690 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr16-635 chr16 1261269 1261479 + 18.1 0.000 Intergenic CpG 5305 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr1-909 chr1 9588456 9588666 + 18.1 0.000 promoter-TSS (NM_001130924) promoter-TSS (NM_001130924) -350 NM_001010866 199953 Hs.632365 NM_001010866 ENSG00000188807 TMEM201 Ima1|NET5|SAMP1 transmembrane protein 201 protein-coding chr12-1562 chr12 112018789 112018999 + 18.1 0.000 intron (NM_001034025, intron 1 of 1) L1MB5|LINE|L1 5468 NM_006817 10961 Hs.75841 NM_006817 ENSG00000089248 ERP29 C12orf8|ERp28|ERp31|HEL-S-107|PDI-DB|PDIA9 endoplasmic reticulum protein 29 protein-coding chr2-1826 chr2 121136506 121136716 + 18.1 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 148591 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr5-612 chr5 57889686 57889896 + 18.1 0.000 TTS (NR_109900) TTS (NR_109900) 9371 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr4-1097 chr4 185656770 185656980 + 18.1 0.000 promoter-TSS (NM_001145674) promoter-TSS (NM_001145674) 94 NM_001145674 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr11-806 chr11 1272021 1272231 + 18.1 0.000 Intergenic CpG 15521 NR_106802 102466725 NR_106802 ENSG00000275669 MIR6744 hsa-mir-6744 microRNA 6744 ncRNA chr1-2580 chr1 38541303 38541513 + 18.1 0.000 Intergenic L3|LINE|CR1 66212 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chrX-221 chrX 49123710 49123920 + 18.1 0.000 promoter-TSS (NM_015698) promoter-TSS (NM_015698) -80 NM_015698 27238 Hs.503666 NM_015698 ENSG00000068394 GPKOW GPATC5|GPATCH5|Spp2|T54 G-patch domain and KOW motifs protein-coding chr3-655 chr3 48898730 48898940 + 18.1 0.000 promoter-TSS (NM_000387) promoter-TSS (NM_000387) 47 NM_000387 788 Hs.13845 NM_000387 ENSG00000178537 SLC25A20 CAC|CACT solute carrier family 25 member 20 protein-coding chr14-611 chr14 68689110 68689320 + 18.1 0.000 Intergenic Intergenic -60428 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14-833 chr14 50650989 50651199 + 18.1 0.000 intron (NM_021818, intron 2 of 4) MLT1F|LTR|ERVL-MaLR 17212 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding chr22-877 chr22 41687831 41688041 + 18.1 0.000 intron (NM_005008, intron 1 of 3) intron (NM_005008, intron 1 of 3) 931 NM_005008 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chr7-278 chr7 17940481 17940691 + 18.1 0.000 promoter-TSS (NR_146932) promoter-TSS (NR_146932) -78 NM_001350868 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding chr17-1193 chr17 68772165 68772375 + 18.1 0.000 Intergenic Intergenic 144116 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr6-781 chr6 106163480 106163690 + 18.1 0.000 Intergenic Intergenic 64644 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr17-2408 chr17 81173866 81174076 + 18.1 0.000 intron (NM_001354639, intron 2 of 6) L1M3|LINE|L1 -7750 NM_001080395 9625 Hs.514575 NM_004920 ENSG00000181409 AATK AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP apoptosis associated tyrosine kinase protein-coding chr16-1289 chr16 79606169 79606379 + 18.1 0.000 Intergenic Intergenic -5537 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr2-1971 chr2 19124198 19124408 + 18.1 0.000 Intergenic L2b|LINE|L2 -97332 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr8-855 chr8 23540957 23541167 + 18.1 0.000 intron (NM_001317814, intron 2 of 4) MIRb|SINE|MIR 12106 NM_016612 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr22-444 chr22 38461544 38461754 + 18.1 0.000 Intergenic CpG -6413 NM_016657 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr5-987 chr5 33105754 33105964 + 18.1 0.000 Intergenic L1PA15-16|LINE|L1 -123876 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr9-1662 chr9 33162472 33162682 + 18.1 0.000 intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -4371 NR_108110 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr16-670 chr16 59527280 59527490 + 18.1 0.000 Intergenic Intergenic 227806 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr4-985 chr4 122100049 122100259 + 18.1 0.000 Intergenic Intergenic -70449 NM_015312 84162 Hs.408142 NM_015312 ENSG00000138688 KIAA1109 ALKKUCS|FSA|Tweek KIAA1109 protein-coding chr12-516 chr12 132761079 132761289 + 18.1 0.000 intron (NM_015114, intron 1 of 12) L2|LINE|L2 648 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr12-1179 chr12 57046530 57046740 + 18.1 0.000 exon (NM_001256041, exon 9 of 29) exon (NM_001256041, exon 9 of 29) 3494 NM_005379 4640 Hs.5394 NM_005379 ENSG00000166866 MYO1A BBMI|DFNA48|MIHC|MYHL myosin IA protein-coding chrX-170 chrX 151396989 151397199 + 18.1 0.000 promoter-TSS (NM_001017980) promoter-TSS (NM_001017980) -91 NM_001017980 203547 Hs.58633 NM_001017980 ENSG00000160131 VMA21 MEAX|XMEA vacuolar ATPase assembly factor VMA21 protein-coding chr1-2667 chr1 183813332 183813542 + 18.1 0.000 intron (NM_001297671, intron 2 of 17) intron (NM_001297671, intron 2 of 17) 8317 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr1-1328 chr1 184037009 184037219 + 18.1 0.000 exon (NM_001303420, exon 1 of 12) exon (NM_001303420, exon 1 of 12) 614 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr1-2142 chr1 3352500 3352710 + 18.1 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -102060 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr7-711 chr7 74084475 74084685 + 18.1 0.000 intron (NM_002314, intron 1 of 15) intron (NM_002314, intron 1 of 15) 776 NM_002314 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr4-574 chr4 7266550 7266760 + 18.1 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -43795 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr9-763 chr9 110257443 110257653 + 18.1 0.000 Intergenic Intergenic -1041 NM_003329 7295 Hs.435136 NM_003329 ENSG00000136810 TXN TRDX|TRX|TRX1 thioredoxin protein-coding chr10-723 chr10 119090962 119091172 + 18.1 0.000 Intergenic Intergenic -10250 NM_003750 8661 Hs.523299 NM_003750 ENSG00000107581 EIF3A EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 eukaryotic translation initiation factor 3 subunit A protein-coding chr2-1548 chr2 217527637 217527847 + 18.1 0.000 intron (NR_026597, intron 2 of 12) intron (NR_026597, intron 2 of 12) 228851 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr7-783 chr7 129923826 129924036 + 18.1 0.000 intron (NM_001202498, intron 1 of 6) intron (NM_001202498, intron 1 of 6) 29029 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr14-397 chr14 101810245 101810455 + 18.1 0.000 intron (NM_178586, intron 1 of 12) intron (NM_178586, intron 1 of 12) 487 NM_001352912 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr11-1679 chr11 44229772 44229982 + 18.1 0.000 intron (NM_207122, intron 10 of 13) L2a|LINE|L2 80262 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr5-813 chr5 139696953 139697163 + 18.1 0.000 Intergenic CpG 21615 NM_001317211 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr14-1116 chr14 75631606 75631816 + 18.1 0.000 intron (NM_017791, intron 3 of 9) intron (NM_017791, intron 3 of 9) 26171 NM_001195283 55640 Hs.509966 NM_017791 ENSG00000119686 FLVCR2 C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH|SLC49A2 feline leukemia virus subgroup C cellular receptor family member 2 protein-coding chr2-2057 chr2 178163484 178163694 + 18.1 0.000 Intergenic Intergenic -30892 NM_001201482 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr9-1585 chr9 91274985 91275195 + 18.1 0.000 intron (NM_001698, intron 6 of 9) MIR|SINE|MIR 86834 NM_001698 549 Hs.175905 NM_001698 ENSG00000148090 AUH - AU RNA binding methylglutaconyl-CoA hydratase protein-coding chr19-967 chr19 49791967 49792177 + 18.1 0.000 TTS (NR_106857) TTS (NR_106857) 206 NR_106857 102465479 NR_106857 ENSG00000276270 MIR6799 hsa-mir-6799 microRNA 6799 ncRNA chr2-1888 chr2 96202461 96202671 + 18.1 0.000 intron (NM_020151, intron 1 of 7) intron (NM_020151, intron 1 of 7) -5850 NR_046322 285033 Hs.58648 NM_001037228 STARD7-AS1 - STARD7 antisense RNA 1 ncRNA chr7-1308 chr7 94529597 94529807 + 18.1 0.000 intron (NM_001363427, intron 6 of 17) L2b|LINE|L2 19893 NM_001363426 64921 Hs.260041 NM_022900 ENSG00000127995 CASD1 C7orf12|NBLA04196|SOAT CAS1 domain containing 1 protein-coding chr1-1579 chr1 27594566 27594776 + 18.1 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 8823 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr9-509 chr9 134626602 134626812 + 18.1 0.000 Intergenic Intergenic -15098 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr22-667 chr22 46358799 46359009 + 18.1 0.000 Intergenic Intergenic 23190 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr20-868 chr20 6003378 6003588 + 18.1 0.000 intron (NR_110101, intron 1 of 4) intron (NR_110101, intron 1 of 4) 2338 NR_110101 101929225 Hs.635771 NR_110101 ENSG00000278719 MCM8-AS1 - MCM8 antisense RNA 1 ncRNA chr13-366 chr13 48233417 48233627 + 18.1 0.000 intron (NM_021999, intron 1 of 5) CpG 316 NM_021999 9445 Hs.643683 NM_021999 ENSG00000136156 ITM2B ABRI|BRI|BRI2|BRICD2B|E25B|E3-16|FBD|RDGCA|imBRI2 integral membrane protein 2B protein-coding chr9-702 chr9 38026231 38026441 + 18.1 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 42891 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr16-1342 chr16 69861790 69862000 + 18.1 0.000 intron (NM_001270453, intron 3 of 20) intron (NM_001270453, intron 3 of 20) 23158 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr1-2098 chr1 115227794 115228004 + 18.1 0.000 Intergenic L3|LINE|CR1 -55135 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr4-372 chr4 26319587 26319797 + 18.1 0.000 promoter-TSS (NM_203283) promoter-TSS (NM_203283) -18 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr2-259 chr2 74002620 74002830 + 18.1 0.000 promoter-TSS (NM_001366022) promoter-TSS (NM_001366022) 33 NM_001366022 200424 Hs.208546 NM_001287491 ENSG00000187605 TET3 hCG_40738 tet methylcytosine dioxygenase 3 protein-coding chr3-1575 chr3 54882477 54882687 + 18.1 0.000 intron (NM_018398, intron 21 of 37) intron (NM_018398, intron 21 of 37) 18673 NR_046666 100874237 Hs.570583 NR_046666 ENSG00000243715 CACNA2D3-AS1 - CACNA2D3 antisense RNA 1 ncRNA chr2-1284 chr2 121710739 121710949 + 18.1 0.000 intron (NR_037857, intron 3 of 3) intron (NR_037857, intron 3 of 3) 26031 NM_032390 84365 Hs.367842 NM_032390 ENSG00000155438 NIFK MKI67IP|Nopp34 nucleolar protein interacting with the FHA domain of MKI67 protein-coding chr1-2877 chr1 212218971 212219181 + 18.1 0.000 intron (NR_125982, intron 2 of 3) intron (NR_125982, intron 2 of 3) 15660 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr8-857 chr8 25214943 25215153 + 18.1 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 30359 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr1-3282 chr1 229758500 229758710 + 18.1 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 127213 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr20-461 chr20 51447301 51447511 + 18.1 0.000 intron (NM_012340, intron 6 of 10) intron (NM_012340, intron 6 of 10) 5571 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr20-929 chr20 9130738 9130948 + 18.1 0.000 intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) 61789 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr1-1522 chr1 64470117 64470327 + 18.1 0.000 promoter-TSS (NM_020925) promoter-TSS (NM_020925) 93 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr7-1381 chr7 130960463 130960673 + 18.1 0.000 intron (NR_109852, intron 4 of 5) intron (NR_109852, intron 4 of 5) 47104 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr3-1527 chr3 172832090 172832300 + 18.1 0.000 Intergenic Intergenic 81193 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr14-675 chr14 73059348 73059558 + 18.1 0.000 intron (NM_021239, intron 1 of 18) intron (NM_021239, intron 1 of 18) 919 NM_021239 58517 Hs.531106 NM_021239 ENSG00000119707 RBM25 NET52|RED120|RNPC7|S164|Snu71|fSAP94 RNA binding motif protein 25 protein-coding chr2-888 chr2 68358074 68358284 + 18.1 0.000 Intergenic Intergenic -7103 NM_002664 5341 Hs.468840 NM_002664 ENSG00000115956 PLEK P47 pleckstrin protein-coding chr5-888 chr5 126472392 126472602 + 18.1 0.000 intron (NR_146196, intron 4 of 14) intron (NR_146196, intron 4 of 14) 7347 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr1-2448 chr1 32101190 32101400 + 18.1 0.000 intron (NM_001319679, intron 6 of 6) MIRb|SINE|MIR -6761 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr11-553 chr11 925862 926072 + 18.1 0.000 promoter-TSS (NM_012305).3 promoter-TSS (NM_012305).3 97 NM_012305 161 Hs.19121 NM_012305 ENSG00000183020 AP2A2 ADTAB|CLAPA2|HIP-9|HIP9|HYPJ adaptor related protein complex 2 subunit alpha 2 protein-coding chr3-667 chr3 23685862 23686072 + 18.1 0.000 Intergenic Intergenic -119988 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr17-585 chr17 50783202 50783412 + 18.1 0.000 Intergenic Intergenic 14657 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr11-1573 chr11 117384092 117384302 + 18.1 0.000 intron (NM_001271933, intron 13 of 31) intron (NM_001271933, intron 13 of 31) 56343 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr1-2154 chr1 18875305 18875515 + 18.1 0.000 exon (NM_001319218, exon 12 of 14) exon (NM_001319218, exon 12 of 14) 7865 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 - microRNA 4695 ncRNA chr2-606 chr2 87076506 87076716 + 18.1 0.000 promoter-TSS (NR_026846) promoter-TSS (NR_026846) -198 NR_026846 285074 Hs.424184 NM_001012626 ENSG00000285793 LOC285074 - anaphase promoting complex subunit 1 pseudogene pseudo chr5-1405 chr5 149414471 149414681 + 18.1 0.000 intron (NR_105060, intron 1 of 4) (ACCTCCT)n|Simple_repeat|Simple_repeat 7731 NR_105060 728264 Hs.519666 NR_027180 CARMN CARMEN|MIR143HG cardiac mesoderm enhancer-associated non-coding RNA ncRNA chr6-382 chr6 16154990 16155200 + 18.1 0.000 Intergenic Intergenic 13539 NR_039782 100616269 NR_039782 ENSG00000263712 MIR4639 - microRNA 4639 ncRNA chr13-738 chr13 104553395 104553605 + 18.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -912367 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr8-1032 chr8 42543138 42543348 + 18.1 0.000 intron (NM_001363186, intron 1 of 3) intron (NM_001363186, intron 1 of 3) -1289 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr15-843 chr15 57772304 57772514 + 18.1 0.000 Intergenic L1ME3F|LINE|L1 65695 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr13-711 chr13 49776882 49777092 + 18.1 0.000 intron (NM_002267, intron 1 of 16) intron (NM_002267, intron 1 of 16) 15695 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr1-1736 chr1 116910088 116910298 + 18.1 0.000 5' UTR (NM_020440, exon 1 of 9) 5' UTR (NM_020440, exon 1 of 9) 277 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr2-2654 chr2 190467545 190467755 + 18.1 0.000 intron (NM_017694, intron 3 of 7) intron (NM_017694, intron 3 of 7) 59295 NM_017694 54842 Hs.418581 NM_017694 ENSG00000151690 MFSD6 MMR2|hMMR2 major facilitator superfamily domain containing 6 protein-coding chr12-851 chr12 132589061 132589271 + 18.1 0.000 Intergenic Intergenic 7169 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr5-837 chr5 55160956 55161166 + 18.1 0.000 non-coding (NR_131337, exon 3 of 4) non-coding (NR_131337, exon 3 of 4) 890 NR_131340 493869 Hs.289044 NM_001008397 ENSG00000164294 GPX8 EPLA847|GPx-8|GSHPx-8|UNQ847 glutathione peroxidase 8 (putative) protein-coding chr5-879 chr5 34762542 34762752 + 18.1 0.000 intron (NM_015577, intron 3 of 17) intron (NM_015577, intron 3 of 17) 75088 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr7-904 chr7 82443492 82443702 + 18.1 0.000 5' UTR (NM_001302890, exon 1 of 11) 5' UTR (NM_001302890, exon 1 of 11) 180 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr20-256 chr20 62407288 62407498 + 18.1 0.000 promoter-TSS (NM_031215) promoter-TSS (NM_031215) -110 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding chr9-608 chr9 133950810 133951020 + 18.1 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 41409 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr12-604 chr12 49637041 49637251 + 18.1 0.000 3' UTR (NM_198900, exon 25 of 25) 3' UTR (NM_198900, exon 25 of 25) 6602 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr1-3921 chr1 85462588 85462798 + 18.1 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) 2466 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr19-1362 chr19 58183058 58183268 + 18.1 0.000 5' UTR (NM_001278734, exon 1 of 8) 5' UTR (NM_001278734, exon 1 of 8) 102 NM_133502 10782 Hs.83761 NM_016324 ENSG00000171606 ZNF274 HFB101|ZF2|ZKSCAN19|ZSCAN51 zinc finger protein 274 protein-coding chr5-288 chr5 120464217 120464427 + 18.1 0.000 promoter-TSS (NM_001300783) promoter-TSS (NM_001300783) 22 NM_001300783 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr17-1314 chr17 78658388 78658598 + 18.1 0.000 Intergenic Intergenic -26436 NR_110849 101928710 Hs.464224 NR_110848 ENSG00000267123 SCAT1 LINC02081|XLOC_012582 S-phase cancer associated transcript 1 ncRNA chr1-2642 chr1 154380094 154380304 + 18.1 0.000 Intergenic SVA_F|Retroposon|SVA -24994 NM_001206866 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr4-994 chr4 148634576 148634786 + 18.1 0.000 Intergenic Intergenic -189983 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr11-1732 chr11 104609372 104609582 + 18.1 0.000 promoter-TSS (NR_120585) promoter-TSS (NR_120585) -175 NR_120585 102723895 Hs.48803 NR_120585 ENSG00000256422 LINC02552 - long intergenic non-protein coding RNA 2552 ncRNA chr3-3075 chr3 132593369 132593579 + 18.1 0.000 intron (NM_032169, intron 13 of 19) intron (NM_032169, intron 13 of 19) -3796 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr19-1854 chr19 16316305 16316515 + 18.1 0.000 Intergenic Intergenic -8416 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr11-2604 chr11 132050861 132051071 + 18.1 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 140148 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr20-1209 chr20 15799915 15800125 + 18.1 0.000 intron (NM_001351663, intron 8 of 17) L1MA4|LINE|L1 123294 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr6-725 chr6 131199790 131200000 + 18.1 0.000 intron (NM_016377, intron 6 of 7) intron (NM_016377, intron 6 of 7) -50509 NM_004842 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr6-1821 chr6 147381746 147381956 + 18.1 0.000 intron (NM_139244, intron 24 of 25) L1MB7|LINE|L1 -126839 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr17-2176 chr17 60082613 60082823 + 18.1 0.000 TTS (NR_030732) TTS (NR_030732) 3409 NR_135648 105371849 Hs.621935 NR_135648 ENSG00000267416 LOC105371849 - uncharacterized LOC105371849 ncRNA chr2-1410 chr2 109241549 109241759 + 18.1 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 71971 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr17-1181 chr17 56112173 56112383 + 18.1 0.000 Intergenic Intergenic -41197 NM_001370326 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr10-569 chr10 71773558 71773768 + 18.1 0.000 promoter-TSS (NM_022153) promoter-TSS (NM_022153) -143 NM_022153 64115 Hs.47382 NM_022153 ENSG00000107738 VSIR B7-H5|B7H5|C10orf54|DD1alpha|Dies1|GI24|PD-1H|PP2135|SISP1|VISTA V-set immunoregulatory receptor protein-coding chr16-1180 chr16 89577520 89577730 + 18.1 0.000 exon (NM_014427, exon 2 of 17) exon (NM_014427, exon 2 of 17) 1867 NM_014427 27132 Hs.461775 NM_014427 ENSG00000178773 CPNE7 - copine 7 protein-coding chr7-1758 chr7 47691194 47691404 + 18.1 0.000 Intergenic Intergenic 36055 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr14-371 chr14 63373005 63373215 + 18.1 0.000 non-coding (NR_104104, exon 13 of 13) non-coding (NR_104104, exon 13 of 13) -54175 NM_145171 122876 Hs.375028 NM_145171 ENSG00000179600 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone subunit beta 5 protein-coding chr17-800 chr17 60391041 60391251 + 18.1 0.000 intron (NM_032582, intron 1 of 33) intron (NM_032582, intron 1 of 33) 987 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr7-1411 chr7 27952478 27952688 + 18.0 0.000 intron (NM_175061, intron 2 of 4) intron (NM_175061, intron 2 of 4) 212488 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr17-2137 chr17 30079966 30080176 + 18.0 0.000 intron (NM_198529, intron 15 of 22) intron (NM_198529, intron 15 of 22) -36736 NM_001261467 84081 Hs.462663 NM_032141 ENSG00000126653 NSRP1 CCDC55|HSPC095|NSrp70 nuclear speckle splicing regulatory protein 1 protein-coding chr14-683 chr14 99879334 99879544 + 18.0 0.000 intron (NM_004434, intron 4 of 21) intron (NM_004434, intron 4 of 21) 86026 NM_001008707 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr1-3283 chr1 232793979 232794189 + 18.0 0.000 Intergenic Intergenic -10808 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr8-454 chr8 89322318 89322528 + 18.0 0.000 Intergenic Intergenic 435288 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chrX-101 chrX 74292498 74292708 + 18.0 0.000 intron (NR_028379, intron 1 of 6) CpG 971 NR_028379 100302692 Hs.349570 NR_028379 ENSG00000230590 FTX LINC00182|MIR374AHG|NCRNA00182 FTX transcript, XIST regulator ncRNA chr6-288 chr6 41734240 41734450 + 18.0 0.000 promoter-TSS (NM_001271945) promoter-TSS (NM_001271945) 56 NM_001271945 7942 Hs.485360 NM_007162 ENSG00000112561 TFEB ALPHATFEB|BHLHE35|TCFEB transcription factor EB protein-coding chr2-3355 chr2 226080333 226080543 + 18.0 0.000 Intergenic Intergenic -62356 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr13-505 chr13 94112293 94112503 + 18.0 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) 75593 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr1-2327 chr1 183249185 183249395 + 18.0 0.000 3' UTR (NM_015039, exon 11 of 11) 3' UTR (NM_015039, exon 11 of 11) 55584 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr16-948 chr16 70738402 70738612 + 18.0 0.000 intron (NM_001351157, intron 12 of 17) intron (NM_001351157, intron 12 of 17) -16588 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr3-753 chr3 185717269 185717479 + 18.0 0.000 intron (NR_126326, intron 2 of 7) intron (NR_126326, intron 2 of 7) 4122 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr2-2747 chr2 174596069 174596279 + 18.0 0.000 intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) -38102 NR_104088 101954278 NR_104088 ENSG00000202337 RNU6-8 U6-8 RNA, U6 small nuclear 8 snRNA chr11-790 chr11 34501656 34501866 + 18.0 0.000 intron (NM_001422, intron 2 of 6) intron (NM_001422, intron 2 of 6) 9963 NM_198381 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr5-2340 chr5 69136085 69136295 + 18.0 0.000 Intergenic Intergenic -24618 NR_145732 109616958 NR_145732 ENSG00000280894 SNORA50D - small nucleolar RNA, H/ACA box 50D snoRNA chr19-1228 chr19 18453381 18453591 + 18.0 0.000 intron (NM_006532, intron 6 of 11) MER66B|LTR|ERV1 -15353 NM_001170938 51477 Hs.405873 NM_016368 ENSG00000105655 ISYNA1 INO1|INOS|IPS|IPS 1|IPS-1 inositol-3-phosphate synthase 1 protein-coding chr17-1274 chr17 66724717 66724927 + 18.0 0.000 intron (NM_002737, intron 8 of 16) intron (NM_002737, intron 8 of 16) -62250 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr10-1042 chr10 43048595 43048805 + 18.0 0.000 Intergenic L2a|LINE|L2 -28327 NM_020630 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chrX-345 chrX 17078084 17078294 + 18.0 0.000 intron (NM_001080975, intron 13 of 17) intron (NM_001080975, intron 13 of 17) 131531 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr18-132 chr18 62187095 62187305 + 18.0 0.000 promoter-TSS (NM_001346231) promoter-TSS (NM_001346231) -55 NR_144404 57614 Hs.465323 NM_020854 ENSG00000134444 RELCH HsT3308|HsT885|KIAA1468 RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing protein-coding chr7-885 chr7 134458280 134458490 + 18.0 0.000 intron (NM_001346142, intron 1 of 9) CpG 715 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr9-772 chr9 127348205 127348415 + 18.0 0.000 intron (NR_104591, intron 16 of 26) intron (NR_104591, intron 16 of 26) -48828 NM_001271711 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr3-1329 chr3 65956057 65956267 + 18.0 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -1604 NR_145422 151877 Hs.476636 NR_145422 ENSG00000272610 MAGI1-IT1 - MAGI1 intronic transcript 1 ncRNA chr1-3042 chr1 6521700 6521910 + 18.0 0.000 3' UTR (NM_024654, exon 12 of 12) 3' UTR (NM_024654, exon 12 of 12) -1744 NM_198681 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr17-1486 chr17 5062367 5062577 + 18.0 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger -15995 NM_153018 124961 Hs.48832 NM_153018 ENSG00000180787 ZFP3 ZNF752 ZFP3 zinc finger protein protein-coding chr1-1906 chr1 205925711 205925921 + 18.0 0.000 intron (NM_052934, intron 12 of 20) MIRb|SINE|MIR -9097 NR_110984 103021296 Hs.613648 NR_110983 SLC26A9-AS1 - SLC26A9 and RAB7B antisense RNA 1 ncRNA chr15-788 chr15 58473862 58474072 + 18.0 0.000 intron (NR_120338, intron 2 of 2) intron (NR_120338, intron 2 of 2) 24768 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr12-2219 chr12 51835420 51835630 + 18.0 0.000 Intergenic Intergenic -3608 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chrX-201 chrX 103686827 103687037 + 18.0 0.000 promoter-TSS (NM_001142429) promoter-TSS (NM_001142429) -114 NM_001142418 9643 Hs.326387 NM_012286 ENSG00000123562 MORF4L2 MORFL2|MRGX mortality factor 4 like 2 protein-coding chr1-1450 chr1 234744026 234744236 + 18.0 0.000 Intergenic Intergenic 15925 NR_148962 100130249 Hs.617350 NR_148962 ENSG00000279261 PP2672 - uncharacterized LOC100130249 ncRNA chr4-162 chr4 38318821 38319031 + 18.0 0.000 Intergenic Intergenic -47988 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr6-1806 chr6 133707581 133707791 + 18.0 0.000 intron (NR_109982, intron 4 of 8) intron (NR_109982, intron 4 of 8) -113461 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr15-653 chr15 51751936 51752146 + 18.0 0.000 promoter-TSS (NM_001143917) promoter-TSS (NM_001143917) 444 NM_001142885 29767 Hs.513734 NM_014548 ENSG00000128872 TMOD2 N-TMOD|NTMOD tropomodulin 2 protein-coding chr8-364 chr8 43056321 43056531 + 18.0 0.000 exon (NM_002027, exon 1 of 9) exon (NM_002027, exon 1 of 9) 103 NM_002027 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr17-1604 chr17 67830664 67830874 + 18.0 0.000 intron (NM_182641, intron 1 of 27) intron (NM_182641, intron 1 of 27) 5266 NM_004459 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr11-1214 chr11 10592419 10592629 + 18.0 0.000 intron (NM_001100163, intron 17 of 20) intron (NM_001100163, intron 17 of 20) -23859 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr20-520 chr20 20034594 20034804 + 18.0 0.000 3' UTR (NM_001278628, exon 14 of 14) 3' UTR (NM_001278628, exon 14 of 14) 16904 NM_181527 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr8-1431 chr8 118067329 118067539 + 18.0 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 44385 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr12-1273 chr12 77087488 77087698 + 18.0 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -22024 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr2-1261 chr2 32832967 32833177 + 18.0 0.000 intron (NR_027098, intron 1 of 5) intron (NR_027098, intron 1 of 5) 7639 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr5-675 chr5 36606464 36606674 + 18.0 0.000 promoter-TSS (NM_001166695) promoter-TSS (NM_001166695) -37 NM_004172 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr22-991 chr22 39177418 39177628 + 18.0 0.000 Intergenic Intergenic -24843 NM_175709 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr11-3044 chr11 4135048 4135258 + 18.0 0.000 exon (NM_001318065, exon 12 of 13) exon (NM_001318065, exon 12 of 13) 19075 NM_001330193 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr16-1017 chr16 85674088 85674298 + 18.0 0.000 3' UTR (NM_014615, exon 16 of 16) 3' UTR (NM_014615, exon 16 of 16) 14761 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr19-1390 chr19 15326682 15326892 + 18.0 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) 5752 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr12-2159 chr12 121691246 121691456 + 18.0 0.000 Intergenic Intergenic -18707 NM_001363685 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 - MORN repeat containing 3 protein-coding chr5-943 chr5 73565661 73565871 + 18.0 0.000 promoter-TSS (NM_032175) promoter-TSS (NM_032175) 23 NM_032175 84135 Hs.406703 NM_032175 ENSG00000164338 UTP15 NET21 UTP15 small subunit processome component protein-coding chr2-1079 chr2 73064017 73064227 + 18.0 0.000 intron (NM_001330402, intron 1 of 12) intron (NM_001330402, intron 1 of 12) -4950 NM_001330410 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr14-474 chr14 105163746 105163956 + 18.0 0.000 intron (NM_145159, intron 2 of 24) intron (NM_145159, intron 2 of 24) 4925 NM_145159 3714 Hs.433445 NM_002226 ENSG00000184916 JAG2 HJ2|SER2 jagged canonical Notch ligand 2 protein-coding chr1-1612 chr1 89633996 89634206 + 18.0 0.000 intron (NM_032270, intron 1 of 2) intron (NM_032270, intron 1 of 2) 981 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr22-591 chr22 19977367 19977577 + 18.0 0.000 exon (NM_001670, exon 9 of 20) exon (NM_001670, exon 9 of 20) 13719 NR_039918 100616414 NR_039918 ENSG00000284031 MIR4761 - microRNA 4761 ncRNA chr14-912 chr14 75059716 75059926 + 18.0 0.000 intron (NR_126394, intron 1 of 1) L1MB3|LINE|L1 4203 NM_001107 97 Hs.18573 NM_001107 ENSG00000119640 ACYP1 ACYPE acylphosphatase 1 protein-coding chr6-1281 chr6 108944821 108945031 + 18.0 0.000 intron (NM_001286609, intron 11 of 16) intron (NM_001286609, intron 11 of 16) -20823 NR_104137 101929716 NR_104137 ARMC2-AS1 - ARMC2 antisense RNA 1 ncRNA chr22-462 chr22 20526991 20527201 + 18.0 0.000 intron (NM_001293237, intron 1 of 16) intron (NM_001293237, intron 1 of 16) 19049 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr1-4566 chr1 85473611 85473821 + 18.0 0.000 intron (NM_001134445, intron 2 of 6) L2b|LINE|L2 -8557 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr4-885 chr4 184746555 184746765 + 18.0 0.000 Intergenic Intergenic -12564 NR_104593 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr2-2547 chr2 212336954 212337164 + 18.0 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 89301 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr1-2480 chr1 98792017 98792227 + 18.0 0.000 Intergenic Intergenic 130401 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr7-568 chr7 6503697 6503907 + 18.0 0.000 intron (NM_001145118, intron 15 of 21) intron (NM_001145118, intron 15 of 21) -19650 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr6-661 chr6 54335964 54336174 + 18.0 0.000 intron (NM_014464, intron 4 of 10) intron (NM_014464, intron 4 of 10) 27628 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr5-1181 chr5 54701310 54701520 + 18.0 0.000 intron (NR_104658, intron 1 of 2) intron (NR_104658, intron 1 of 2) 1909 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA KI270751.1-1 KI270751.1 150033 150243 + 18.0 0.000 NA NA NA NA chr5-861 chr5 143246119 143246329 + 18.0 0.000 Intergenic Intergenic 53724 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr6-979 chr6 128731731 128731941 + 18.0 0.000 Intergenic Intergenic -151302 NM_001079823 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr7-1021 chr7 24981574 24981784 + 18.0 0.000 Intergenic CpG -1501 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr6-612 chr6 946624 946834 + 18.0 0.000 Intergenic Intergenic 78231 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr9-299 chr9 130446315 130446525 + 18.0 0.000 intron (NM_054012, intron 1 of 14) intron (NM_054012, intron 1 of 14) 1459 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr8-1536 chr8 96892535 96892745 + 18.0 0.000 intron (NM_016134, intron 4 of 7) intron (NM_016134, intron 4 of 7) 247398 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr7-1401 chr7 7969973 7970183 + 18.0 0.000 intron (NM_138426, intron 1 of 7) intron (NM_138426, intron 1 of 7) 1282 NM_138426 113263 Hs.131673 NM_138426 ENSG00000106415 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced 1 protein-coding chr9-860 chr9 33506638 33506848 + 18.0 0.000 intron (NR_003667, intron 4 of 6) AluJb|SINE|Alu 4423 NR_003667 441394 Hs.521441 NR_003667 SUGT1P1 SGT1P|SUGT1P|bA255A11.1 SUGT1 pseudogene 1 pseudo chr1-1173 chr1 167714687 167714897 + 18.0 0.000 Intergenic tRNA-Pro-CCG|tRNA|tRNA -7190 NM_003953 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr1-1509 chr1 24727595 24727805 + 18.0 0.000 Intergenic Intergenic -17747 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr9-751 chr9 70418948 70419158 + 18.0 0.000 Intergenic CpG -4396 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr1-951 chr1 37514735 37514945 + 18.0 0.000 promoter-TSS (NM_022756) promoter-TSS (NM_022756) -74 NR_073090 64769 Hs.17118 NM_022756 ENSG00000163875 MEAF6 C1orf149|CENP-28|EAF6|NY-SAR-91 MYST/Esa1 associated factor 6 protein-coding chr15-942 chr15 90402381 90402591 + 18.0 0.000 intron (NM_003870, intron 2 of 37) intron (NM_003870, intron 2 of 37) 14244 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr2-2805 chr2 40344040 40344250 + 18.0 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 86159 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr17-537 chr17 81711579 81711789 + 18.0 0.000 promoter-TSS (NM_001270953) promoter-TSS (NM_001270953) -552 NM_001270953 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr17-1194 chr17 69608809 69609019 + 18.0 0.000 intron (NR_109972, intron 2 of 4) intron (NR_109972, intron 2 of 4) 14927 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr2-981 chr2 84907155 84907365 + 18.0 0.000 TTS (NM_021103) TTS (NM_021103) 1604 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr7-749 chr7 108246193 108246403 + 18.0 0.000 intron (NM_001371133, intron 3 of 28) intron (NM_001371133, intron 3 of 28) -2913 NM_001371181 chr5-1555 chr5 74949329 74949539 + 18.0 0.000 Intergenic Intergenic -82468 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr17-1078 chr17 16286334 16286544 + 18.0 0.000 intron (NM_004278, intron 2 of 6) intron (NM_004278, intron 2 of 6) 4425 NR_031698 100302124 NR_031698 ENSG00000221355 MIR1288 MIRN1288|hsa-mir-1288 microRNA 1288 ncRNA chr15-441 chr15 57752540 57752750 + 18.0 0.000 Intergenic Intergenic 45931 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr1-2089 chr1 85079001 85079211 + 18.0 0.000 intron (NM_001288563, intron 3 of 21) intron (NM_001288563, intron 3 of 21) 16779 NM_145172 126820 Hs.97933 NM_145172 ENSG00000162643 WDR63 DIC3|NYD-SP29 WD repeat domain 63 protein-coding chr5-1225 chr5 138935201 138935411 + 18.0 0.000 TTS (NM_001290307) TTS (NM_001290307) 59906 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr1-4555 chr1 67987456 67987666 + 18.0 0.000 intron (NR_040077, intron 1 of 9) intron (NR_040077, intron 1 of 9) 64070 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding chr2-1743 chr2 28342686 28342896 + 18.0 0.000 Intergenic Intergenic -32332 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr1-2243 chr1 171654129 171654339 + 18.0 0.000 Intergenic Intergenic -1546 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr17-495 chr17 39730410 39730620 + 18.0 0.000 promoter-TSS (NM_032339) promoter-TSS (NM_032339) 17 NM_032339 84299 Hs.333526 NM_032339 ENSG00000141741 MIEN1 C17orf37|C35|ORB3|RDX12|XTP4 migration and invasion enhancer 1 protein-coding chr6-594 chr6 14001463 14001673 + 18.0 0.000 Intergenic Intergenic 76375 NM_001165033 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chr11-1262 chr11 128507252 128507462 + 18.0 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 14953 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr9-755 chr9 91560473 91560683 + 18.0 0.000 Intergenic Intergenic -75673 NR_037472 100500821 NR_037472 ENSG00000266855 MIR3910-1 mir-3910-1 microRNA 3910-1 ncRNA chr7-975 chr7 23713938 23714148 + 18.0 0.000 intron (NM_031414, intron 3 of 23) Tigger3b|DNA|TcMar-Tigger 3824 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr12-1881 chr12 56269103 56269313 + 18.0 0.000 exon (NM_144576, exon 3 of 5) exon (NM_144576, exon 3 of 5) 1882 NM_001099337 93058 Hs.4096 NM_144576 ENSG00000135469 COQ10A - coenzyme Q10A protein-coding chr2-761 chr2 219245273 219245483 + 18.0 0.000 promoter-TSS (NM_001330213) promoter-TSS (NM_001330213) 66 NM_024506 79411 Hs.181173 NM_024506 ENSG00000163521 GLB1L - galactosidase beta 1 like protein-coding chr1-1305 chr1 28511311 28511521 + 18.0 0.000 TTS (NR_002909) TTS (NR_002909) 2858 NR_004404 26768 NR_004404 ENSG00000200087 SNORA73B 105A|E1c|RNU105A|RNU17B|U17B small nucleolar RNA, H/ACA box 73B snoRNA chr10-667 chr10 68406275 68406485 + 18.0 0.000 intron (NR_103476, intron 1 of 18) intron (NR_103476, intron 1 of 18) 809 NM_017987 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr11-669 chr11 62508483 62508693 + 18.0 0.000 intron (NM_024060, intron 4 of 5) intron (NM_024060, intron 4 of 5) 37076 NM_001346446 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding chr16-382 chr16 2969138 2969348 + 18.0 0.000 promoter-TSS (NM_152341) promoter-TSS (NM_152341) -105 NM_001284512 124222 Hs.351474 NM_152341 ENSG00000162073 PAQR4 - progestin and adipoQ receptor family member 4 protein-coding chr9-768 chr9 126228897 126229107 + 18.0 0.000 Intergenic Intergenic 46913 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr12-888 chr12 101698014 101698224 + 18.0 0.000 exon (NM_020244, exon 1 of 9) exon (NM_020244, exon 1 of 9) 479 NM_020244 56994 Hs.293077 NM_020244 ENSG00000111666 CHPT1 CPT|CPT1 choline phosphotransferase 1 protein-coding chr4-752 chr4 185573907 185574117 + 18.0 0.000 Intergenic Intergenic -38454 NR_047562 27295 Hs.701364 NM_014476 ENSG00000154553 PDLIM3 ALP PDZ and LIM domain 3 protein-coding chr3-2038 chr3 122483081 122483291 + 18.0 0.000 intron (NR_026698, intron 2 of 14) intron (NR_026698, intron 2 of 14) 31753 NR_026698 3836 Hs.161008 NM_002264 ENSG00000114030 KPNA1 IPOA5|NPI-1|RCH2|SRP1 karyopherin subunit alpha 1 protein-coding chr6-897 chr6 126078086 126078296 + 18.0 0.000 non-coding (NR_146804, exon 17 of 17) non-coding (NR_146804, exon 17 of 17) 91651 NR_146804 60487 Hs.404186 NM_021820 ENSG00000066651 TRMT11 C6orf75|MDS024|TRM11|TRMT11-1 tRNA methyltransferase 11 homolog protein-coding chr17-997 chr17 68511607 68511817 + 18.0 0.000 promoter-TSS (NM_001369389) promoter-TSS (NM_001369389) -68 NM_212471 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr16-1130 chr16 68823457 68823667 + 18.0 0.000 exon (NM_004360, exon 13 of 16) exon (NM_004360, exon 13 of 16) -19969 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr3-1337 chr3 112635823 112636033 + 18.0 0.000 intron (NM_199512, intron 2 of 7) intron (NM_199512, intron 2 of 7) 5215 NM_199512 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr2-1278 chr2 86078838 86079048 + 18.0 0.000 intron (NM_015425, intron 9 of 33) intron (NM_015425, intron 9 of 33) 26943 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr10-685 chr10 5596173 5596383 + 18.0 0.000 promoter-TSS (NR_134491) promoter-TSS (NR_134491) -160 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr11-1510 chr11 67409707 67409917 + 18.0 0.000 non-coding (NR_046266, exon 9 of 9) non-coding (NR_046266, exon 9 of 9) 5729 NM_001369495 374403 Hs.534648 NM_198517 ENSG00000175463 TBC1D10C CARABIN|EPI64C TBC1 domain family member 10C protein-coding chr1-2493 chr1 162404897 162405107 + 18.0 0.000 intron (NM_053282, intron 1 of 3) L1ME1|LINE|L1 7134 NM_053282 117157 Hs.350581 NM_053282 ENSG00000198574 SH2D1B EAT2 SH2 domain containing 1B protein-coding chr7-212 chr7 155297595 155297805 + 18.0 0.000 promoter-TSS (NM_005542) promoter-TSS (NM_005542) -72 NM_001346590 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr3-1654 chr3 153221808 153222018 + 18.0 0.000 Intergenic Intergenic 59687 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr7-905 chr7 99091319 99091529 + 18.0 0.000 intron (NM_020429, intron 1 of 18) intron (NM_020429, intron 1 of 18) 52684 NM_020429 57154 Hs.189329 NM_020429 ENSG00000198742 SMURF1 - SMAD specific E3 ubiquitin protein ligase 1 protein-coding chr12-1758 chr12 78290614 78290824 + 18.0 0.000 Intergenic Intergenic 69027 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr2-1773 chr2 201697824 201698034 + 18.0 0.000 intron (NM_033066, intron 1 of 21) intron (NM_033066, intron 1 of 21) 715 NM_033066 58538 Hs.63085 NM_033066 ENSG00000082126 MPP4 ALS2CR5|DLG6 membrane palmitoylated protein 4 protein-coding chr1-3133 chr1 57843919 57844129 + 18.0 0.000 intron (NM_001353980, intron 3 of 5) L2c|LINE|L2 -16557 NR_104362 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr3-567 chr3 48918739 48918949 + 18.0 0.000 promoter-TSS (NM_001349227) promoter-TSS (NM_001349227) 2 NM_001349226 10425 Hs.633601 NM_006321 ENSG00000177479 ARIH2 ARI2|TRIAD1 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding chr20-432 chr20 38023538 38023748 + 18.0 0.000 intron (NM_014657, intron 1 of 8) intron (NM_014657, intron 1 of 8) 9813 NM_001303457 9675 Hs.655481 NM_014657 ENSG00000101407 TTI1 KIAA0406|smg-10 TELO2 interacting protein 1 protein-coding chr16-1249 chr16 3857287 3857497 + 18.0 0.000 intron (NM_004380, intron 1 of 30) intron (NM_004380, intron 1 of 30) 22728 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr13-258 chr13 46665624 46665834 + 18.0 0.000 intron (NM_001164213, intron 2 of 18) intron (NM_001164213, intron 2 of 18) 112559 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr1-1526 chr1 84633108 84633318 + 18.0 0.000 intron (NR_027379, intron 1 of 2) intron (NR_027379, intron 1 of 2) 1807 NR_027379 439927 Hs.407054 NM_001033660 ENSG00000180869 LINC01555 C1orf180 long intergenic non-protein coding RNA 1555 ncRNA chr7-1085 chr7 113087761 113087971 + 18.0 0.000 promoter-TSS (NM_018970) promoter-TSS (NM_018970) -88 NM_018970 54329 Hs.152009 NM_018970 ENSG00000164604 GPR85 SREB|SREB2 G protein-coupled receptor 85 protein-coding chr4-678 chr4 119212468 119212678 + 18.0 0.000 promoter-TSS (NM_001371397) promoter-TSS (NM_001371397) -54 NM_019050 54532 Hs.431081 NM_019050 ENSG00000145390 USP53 - ubiquitin specific peptidase 53 protein-coding chr2-2875 chr2 188142640 188142850 + 18.0 0.000 intron (NR_126396, intron 2 of 2) intron (NR_126396, intron 2 of 2) 144946 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr17-1467 chr17 63648110 63648320 + 18.0 0.000 intron (NM_203351, intron 4 of 16) intron (NM_203351, intron 4 of 16) 25798 NM_203351 4215 Hs.29282 NM_002401 ENSG00000198909 MAP3K3 MAPKKK3|MEKK3 mitogen-activated protein kinase kinase kinase 3 protein-coding chr12-324 chr12 109880393 109880603 + 18.0 0.000 promoter-TSS (NM_016433) promoter-TSS (NM_016433) 43 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr22-505 chr22 41946177 41946387 + 18.0 0.000 intron (NM_024053, intron 2 of 5) intron (NM_024053, intron 2 of 5) 472 NM_001304370 79019 Hs.208912 NM_024053 ENSG00000100162 CENPM C22orf18|CENP-M|PANE1 centromere protein M protein-coding chr15-830 chr15 33154975 33155185 + 18.0 0.000 intron (NM_001277313, intron 3 of 20) intron (NM_001277313, intron 3 of 20) 39634 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr1-2597 chr1 61993401 61993611 + 18.0 0.000 intron (NM_001350145, intron 28 of 43) MER21C|LTR|ERVL -85280 NR_036058 100422902 NR_036058 ENSG00000263908 MIR3116-1 - microRNA 3116-1 ncRNA chr8-509 chr8 30311921 30312131 + 18.0 0.000 Intergenic Intergenic -72475 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr16-774 chr16 88743944 88744154 + 18.0 0.000 non-coding (NR_120387, exon 2 of 3) non-coding (NR_120387, exon 2 of 3) 1282 NR_120387 339059 Hs.449817 NR_120387 ENSG00000182376 LOC339059 - uncharacterized LOC339059 ncRNA chr10-1238 chr10 77949123 77949333 + 18.0 0.000 Intergenic Intergenic 22416 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr2-978 chr2 49251943 49252153 + 18.0 0.000 Intergenic Intergenic -97521 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding chr11-1441 chr11 68338051 68338261 + 18.0 0.000 intron (NM_002335, intron 1 of 22) intron (NM_002335, intron 1 of 22) 25565 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr13-795 chr13 99046639 99046849 + 18.0 0.000 intron (NM_015296, intron 1 of 55) intron (NM_015296, intron 1 of 55) -30959 NM_001366677 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr1-930 chr1 161202232 161202442 + 18.0 0.000 5' UTR (NM_004550, exon 2 of 15) 5' UTR (NM_004550, exon 2 of 15) 190 NM_001166159 4720 Hs.173611 NM_004550 ENSG00000158864 NDUFS2 CI-49|MC1DN6 NADH:ubiquinone oxidoreductase core subunit S2 protein-coding chr10-1329 chr10 96271533 96271743 + 18.0 0.000 promoter-TSS (NM_001258440) promoter-TSS (NM_001258440) -62 NM_013314 29760 Hs.665244 NM_013314 ENSG00000095585 BLNK AGM4|BASH|BLNK-S|LY57|SLP-65|SLP65|bca B cell linker protein-coding chr9-1058 chr9 83981158 83981368 + 18.0 0.000 promoter-TSS (NM_002140) promoter-TSS (NM_002140) 458 NM_024945 80010 Hs.726327 NM_024945 ENSG00000178966 RMI1 BLAP75|C9orf76|FAAP75 RecQ mediated genome instability 1 protein-coding chr8-1043 chr8 133779340 133779550 + 18.0 0.000 Intergenic L1PB1|LINE|L1 -2093 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr10-431 chr10 70296659 70296869 + 18.0 0.000 Intergenic Intergenic -12760 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr7-2588 chr7 131409711 131409921 + 18.0 0.000 intron (NM_001321316, intron 6 of 17) MLT1L|LTR|ERVL-MaLR 81940 NM_001321316 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr14-603 chr14 34355648 34355858 + 18.0 0.000 Intergenic Intergenic 106487 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr5-616 chr5 72067709 72067919 + 18.0 0.000 Intergenic Intergenic -39661 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr17-2139 chr17 31373225 31373435 + 18.0 0.000 intron (NM_001042492, intron 57 of 57) intron (NM_001042492, intron 57 of 57) -18345 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr15-651 chr15 49675048 49675258 + 18.0 0.000 Intergenic Intergenic 54105 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr3-1760 chr3 187263279 187263489 + 18.0 0.000 intron (NR_033519, intron 1 of 9) L2a|LINE|L2 -27888 NR_135551 101929130 NR_135551 ENSG00000283175 LOC101929130 - uncharacterized LOC101929130 ncRNA chr10-1653 chr10 105023711 105023921 + 18.0 0.000 intron (NM_014978, intron 4 of 26) intron (NM_014978, intron 4 of 26) -357600 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr12-669 chr12 132570361 132570571 + 18.0 0.000 exon (NM_001367871, exon 8 of 19) exon (NM_001367871, exon 8 of 19) -11531 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr1-1793 chr1 83692579 83692789 + 18.0 0.000 intron (NR_119375, intron 2 of 2) intron (NR_119375, intron 2 of 2) 167862 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr17-613 chr17 60037194 60037404 + 18.0 0.000 Intergenic L1MD2|LINE|L1 5806 NR_039890 100616210 NR_039890 ENSG00000264049 MIR4737 - microRNA 4737 ncRNA chr7-937 chr7 45239556 45239766 + 18.0 0.000 Intergenic Intergenic 81870 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr17-2430 chr17 868018 868228 + 18.0 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -4012 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr9-1653 chr9 14438329 14438539 + 18.0 0.000 intron (NM_001369458, intron 1 of 11) intron (NM_001369458, intron 1 of 11) -39451 NM_001190738 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr3-1408 chr3 148789309 148789519 + 18.0 0.000 Intergenic Intergenic -38397 NM_001871 1360 Hs.477891 NM_001871 ENSG00000153002 CPB1 CPB|PASP|PCPB carboxypeptidase B1 protein-coding chr3-1163 chr3 129723971 129724181 + 18.0 0.000 promoter-TSS (NM_001349274) promoter-TSS (NM_001349274) 37 NM_001349274 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr6-639 chr6 105608850 105609060 + 18.0 0.000 Intergenic Intergenic -205873 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr6-1567 chr6 1335568 1335778 + 18.0 0.000 Intergenic Intergenic 23575 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr14-196 chr14 100318227 100318437 + 18.0 0.000 Intergenic Intergenic -5007 NM_001350877 283600 Hs.108268 NM_207117 ENSG00000140107 SLC25A47 C14orf68|HDMCP|HMFN1655 solute carrier family 25 member 47 protein-coding chr8-913 chr8 125439814 125440024 + 18.0 0.000 Intergenic Intergenic 7710 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr4-980 chr4 101356935 101357145 + 18.0 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 9263 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr2-1891 chr2 99602603 99602813 + 18.0 0.000 intron (NM_001025108, intron 12 of 23) intron (NM_001025108, intron 12 of 23) -112691 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr6-545 chr6 157269318 157269528 + 18.0 0.000 Intergenic Intergenic 54836 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr16-730 chr16 85699599 85699809 + 18.0 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -10750 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr17-650 chr17 74987530 74987740 + 18.0 0.000 promoter-TSS (NM_014603) promoter-TSS (NM_014603) 3 NM_014603 30850 Hs.78358 NM_014603 ENSG00000109089 CDR2L HUMPPA cerebellar degeneration related protein 2 like protein-coding chr6-680 chr6 157613398 157613608 + 18.0 0.000 intron (NM_024630, intron 3 of 8) intron (NM_024630, intron 3 of 8) 84371 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr3-2332 chr3 134334733 134334943 + 18.0 0.000 Intergenic Intergenic 21262 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr20-259 chr20 34271919 34272129 + 18.0 0.000 Intergenic Intergenic 11659 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr6-846 chr6 2695540 2695750 + 18.0 0.000 intron (NM_001012418, intron 2 of 12) intron (NM_001012418, intron 2 of 12) 55277 NM_001012418 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr15-351 chr15 33098189 33098399 + 18.0 0.000 intron (NM_001277313, intron 4 of 20) HAL1|LINE|L1 -30120 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr9-956 chr9 82332100 82332310 + 18.0 0.000 Intergenic Intergenic 343433 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr15-210 chr15 65286913 65287123 + 18.0 0.000 promoter-TSS (NM_017851) promoter-TSS (NM_017851) -135 NM_001316943 54956 Hs.30634 NM_017851 ENSG00000138617 PARP16 ARTD15|C15orf30|pART15 poly(ADP-ribose) polymerase family member 16 protein-coding chr7-1436 chr7 46494168 46494378 + 18.0 0.000 Intergenic Intergenic 202849 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr18-311 chr18 58400617 58400827 + 18.0 0.000 3' UTR (NM_001144966, exon 30 of 30) 3' UTR (NM_001144966, exon 30 of 30) -50352 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr12-989 chr12 108563577 108563787 + 18.0 0.000 intron (NM_001320042, intron 1 of 4) intron (NM_001320042, intron 1 of 4) 2219 NR_135127 23479 Hs.615131 NM_014301 ENSG00000136003 ISCU 2310020H20Rik|HML|ISU2|NIFU|NIFUN|hnifU iron-sulfur cluster assembly enzyme protein-coding chr5-603 chr5 32224255 32224465 + 18.0 0.000 Intergenic Intergenic -50041 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr17-1456 chr17 42998676 42998886 + 18.0 0.000 non-coding (NR_146327, exon 2 of 4) non-coding (NR_146327, exon 2 of 4) 362 NR_146327 6155 Hs.514196 NM_000988 ENSG00000131469 RPL27 DBA16|L27 ribosomal protein L27 protein-coding chrX-347 chrX 38262924 38263134 + 18.0 0.000 Intergenic Intergenic -42105 NM_001170752 8406 Hs.15154 NM_006307 ENSG00000101955 SRPX DRS|ETX1|HEL-S-83p|SRPX1 sushi repeat containing protein X-linked protein-coding chr2-2625 chr2 69893924 69894134 + 18.0 0.000 promoter-TSS (NM_006857) promoter-TSS (NM_006857) 73 NR_037862 11017 Hs.54649 NM_006857 ENSG00000124380 SNRNP27 27K|RY1 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 protein-coding chr11-1425 chr11 58963658 58963868 + 18.0 0.000 intron (NR_033853, intron 5 of 5) intron (NR_033853, intron 5 of 5) 20514 NM_080661 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr10-1336 chr10 100025747 100025957 + 18.0 0.000 Intergenic LTR1C3|LTR|ERV1 -15905 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr2-1359 chr2 241768928 241769138 + 18.0 0.000 TTS (NM_001287249) TTS (NM_001287249) -7789 NM_022134 64090 Hs.632556 NM_022134 ENSG00000154252 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding chr3-1216 chr3 64295653 64295863 + 18.0 0.000 Intergenic Intergenic -27585 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr16-712 chr16 17837144 17837354 + 18.0 0.000 Intergenic Intergenic -366289 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr6-498 chr6 75317536 75317746 + 18.0 0.000 intron (NM_001300866, intron 4 of 6) intron (NM_001300866, intron 4 of 6) 32627 NR_040081 100506804 Hs.743708 NR_040081 LOC100506804 - uncharacterized LOC100506804 ncRNA chrX-238 chrX 119693234 119693444 + 18.0 0.000 promoter-TSS (NM_145800) promoter-TSS (NM_145800) -171 NM_145800 23157 Hs.496666 NM_015129 ENSG00000125354 SEPTIN6 SEP2|SEPT2|SEPT6 septin 6 protein-coding chr10-647 chr10 33122126 33122336 + 18.0 0.000 Intergenic Intergenic -5424 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr13-1076 chr13 46804394 46804604 + 18.0 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -7338 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr10-565 chr10 24724583 24724793 + 17.9 0.000 promoter-TSS (NM_020824) promoter-TSS (NM_020824) -801 NM_020824 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr15-517 chr15 38868396 38868606 + 17.9 0.000 Intergenic Charlie25|DNA|hAT-Charlie 171903 NR_160786 chr2-2475 chr2 119252933 119253143 + 17.9 0.000 intron (NM_138637, intron 3 of 5) intron (NM_138637, intron 3 of 5) -3967 NR_046721 100874111 Hs.704682 NR_046721 ENSG00000229867 STEAP3-AS1 - STEAP3 antisense RNA 1 ncRNA chr13-760 chr13 99356331 99356541 + 17.9 0.000 TTS (NR_030353) TTS (NR_030353) 305 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr15-742 chr15 33279971 33280181 + 17.9 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 30169 NR_120326 101928134 Hs.133851 NR_120326 ENSG00000259446 LOC101928134 - uncharacterized LOC101928134 ncRNA chr3-1013 chr3 100992270 100992480 + 17.9 0.000 intron (NM_001349332, intron 1 of 35) intron (NM_001349332, intron 1 of 35) 1115 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr11-3302 chr11 99325875 99326085 + 17.9 0.000 intron (NM_001243271, intron 2 of 20) intron (NM_001243271, intron 2 of 20) -230165 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr3-934 chr3 100024929 100025139 + 17.9 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) -60636 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr3-2009 chr3 26944864 26945074 + 17.9 0.000 Intergenic L1PA8|LINE|L1 250412 NM_001317811 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr16-1447 chr16 71767601 71767811 + 17.9 0.000 intron (NM_001030007, intron 6 of 23) intron (NM_001030007, intron 6 of 23) -9219 NR_003059 692111 NR_003059 ENSG00000223224 SNORD71 HBII-239|MIRN768|hsa-mir-768 small nucleolar RNA, C/D box 71 snoRNA chr10-1613 chr10 63115892 63116102 + 17.9 0.000 Intergenic Intergenic -17250 NM_001282405 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr3-273 chr3 138834908 138835118 + 17.9 0.000 promoter-TSS (NM_006219) promoter-TSS (NM_006219) -85 NM_006219 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr3-1894 chr3 148006663 148006873 + 17.9 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -71391 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr8-907 chr8 117410659 117410869 + 17.9 0.000 Intergenic Intergenic -109949 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr17-1114 chr17 7686339 7686549 + 17.9 0.000 promoter-TSS (NM_001143991) promoter-TSS (NM_001143991) 373 NM_001143990 55135 Hs.408312 NM_018081 ENSG00000141499 WRAP53 DKCB3|TCAB1|WDR79 WD repeat containing antisense to TP53 protein-coding chr8-776 chr8 41712527 41712737 + 17.9 0.000 intron (NM_020475, intron 16 of 41) intron (NM_020475, intron 16 of 41) -47358 NM_020480 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr2-1562 chr2 9982438 9982648 + 17.9 0.000 intron (NM_198182, intron 8 of 15) intron (NM_198182, intron 8 of 15) 30850 NM_198182 29841 Hs.418493 NM_198182 ENSG00000134317 GRHL1 LBP32|MGR|NH32|TFCP2L2 grainyhead like transcription factor 1 protein-coding chr11-2103 chr11 118400454 118400664 + 17.9 0.000 promoter-TSS (NR_033759) promoter-TSS (NR_033759) -830 NR_033759 10632 Hs.486360 NM_006476 ENSG00000167283 ATP5MG ATP5JG|ATP5L ATP synthase membrane subunit g protein-coding chr1-1371 chr1 44030055 44030265 + 17.9 0.000 intron (NM_001328630, intron 1 of 10) CpG 963 NM_001328629 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr12-861 chr12 25804395 25804605 + 17.9 0.000 Intergenic Intergenic 69579 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr7-1357 chr7 66206841 66207051 + 17.9 0.000 intron (NM_003596, intron 1 of 5) intron (NM_003596, intron 1 of 5) 1612 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr8-889 chr8 38571645 38571855 + 17.9 0.000 Intergenic Intergenic 29507 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr7-506 chr7 122144122 122144332 + 17.9 0.000 promoter-TSS (NM_005763) promoter-TSS (NM_005763) 22 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr7-674 chr7 27921259 27921469 + 17.9 0.000 intron (NM_175061, intron 2 of 4) intron (NM_175061, intron 2 of 4) 181269 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr11-3072 chr11 13289088 13289298 + 17.9 0.000 intron (NM_001351822, intron 1 of 18) MIRc|SINE|MIR 11466 NM_001351822 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr19-1855 chr19 16578312 16578522 + 17.9 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) -6002 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr11-1455 chr11 77141006 77141216 + 17.9 0.000 intron (NM_001369365, intron 3 of 49) Tigger3a|DNA|TcMar-Tigger 12865 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr5-859 chr5 139635796 139636006 + 17.9 0.000 Intergenic Intergenic -11398 NM_001317201 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr1-1782 chr1 37477106 37477316 + 17.9 0.000 intron (NM_001323550, intron 2 of 5) intron (NM_001323550, intron 2 of 5) 2631 NM_001323551 80149 Hs.656294 NM_025079 ENSG00000163874 ZC3H12A MCPIP|MCPIP-1|MCPIP1|Reg1|dJ423B22.1 zinc finger CCCH-type containing 12A protein-coding chr5-937 chr5 38501023 38501233 + 17.9 0.000 intron (NM_001127671, intron 11 of 19) MLT1F|LTR|ERVL-MaLR 55518 NM_001127671 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS LIF receptor subunit alpha protein-coding chr5-574 chr5 151619809 151620019 + 17.9 0.000 Intergenic Intergenic -50970 NM_001447 2196 Hs.591255 NM_001447 ENSG00000086570 FAT2 CDHF8|CDHR9|HFAT2|MEGF1|SCA45 FAT atypical cadherin 2 protein-coding chr6-544 chr6 156777294 156777504 + 17.9 0.000 promoter-TSS (NM_001346813) promoter-TSS (NM_001346813) -456 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr19-969 chr19 55116269 55116479 + 17.9 0.000 intron (NM_001271618, intron 1 of 21) intron (NM_001271618, intron 1 of 21) 1263 NM_017607 54776 Hs.631579 NM_017607 ENSG00000125503 PPP1R12C AAVS1|LENG3|MBS85|p84|p85 protein phosphatase 1 regulatory subunit 12C protein-coding chr17-858 chr17 58189843 58190053 + 17.9 0.000 Intergenic Intergenic -2778 NM_000502 8288 Hs.279259 NM_000502 ENSG00000121053 EPX EPO|EPP|EPX-PEN|EPXD eosinophil peroxidase protein-coding chr20-448 chr20 34515403 34515613 + 17.9 0.000 promoter-TSS (NM_014183) promoter-TSS (NM_014183) -876 NM_001281729 83658 Hs.593920 NM_014183 ENSG00000125971 DYNLRB1 BITH|BLP|DNCL2A|DNLC2A|ROBLD1 dynein light chain roadblock-type 1 protein-coding chr2-933 chr2 138501527 138501737 + 17.9 0.000 promoter-TSS (NM_001001664) promoter-TSS (NM_001001664) -138 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr11-1154 chr11 5364468 5364678 + 17.9 0.000 intron (NM_001005567, intron 1 of 4) L2a|LINE|L2 13065 NM_001004750 390058 Hs.553730 NM_001004750 ENSG00000176239 OR51B6 HOR5'Beta6 olfactory receptor family 51 subfamily B member 6 protein-coding chr11-642 chr11 64723193 64723403 + 17.9 0.000 promoter-TSS (NM_138732) promoter-TSS (NM_138732) -101 NM_138732 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr14-437 chr14 77028511 77028721 + 17.9 0.000 promoter-TSS (NM_024496) promoter-TSS (NM_024496) 92 NM_024496 64207 Hs.179260 NM_024496 ENSG00000119669 IRF2BPL C14orf4|EAP1|NEDAMSS interferon regulatory factor 2 binding protein like protein-coding chr19-959 chr19 15331145 15331355 + 17.9 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) 1289 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr7-1287 chr7 2690145 2690355 + 17.9 0.000 intron (NM_001321766, intron 1 of 6) AluJr|SINE|Alu 2048 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr1-2114 chr1 178263542 178263752 + 17.9 0.000 intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) -77804 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr7-834 chr7 87934133 87934343 + 17.9 0.000 promoter-TSS (NM_021722) promoter-TSS (NM_021722) -13 NM_001324418 53616 Hs.256398 NM_004194 ENSG00000008277 ADAM22 ADAM 22|EIEE61|MDC2 ADAM metallopeptidase domain 22 protein-coding chr4-1649 chr4 106034857 106035067 + 17.9 0.000 Intergenic Intergenic -12484 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chr7-1086 chr7 121504536 121504746 + 17.9 0.000 Intergenic Intergenic -108273 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr14-988 chr14 88468403 88468613 + 17.9 0.000 intron (NM_007039, intron 18 of 18) intron (NM_007039, intron 18 of 18) 82851 NM_018418 55812 Hs.525518 NM_018418 ENSG00000042317 SPATA7 HEL-S-296|HSD-3.1|HSD3|LCA3 spermatogenesis associated 7 protein-coding chr19-1576 chr19 5037109 5037319 + 17.9 0.000 intron (NM_001370094, intron 3 of 10) intron (NM_001370094, intron 3 of 10) 68101 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr2-1272 chr2 71756440 71756650 + 17.9 0.000 Intergenic L1M6|LINE|L1 289846 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr1-2011 chr1 79900066 79900276 + 17.9 0.000 Intergenic Intergenic -635584 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr5-1631 chr5 137415359 137415569 + 17.9 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 83862 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr16-1169 chr16 81319586 81319796 + 17.9 0.000 intron (NM_022041, intron 1 of 10) intron (NM_022041, intron 1 of 10) 4725 NM_022041 8139 Hs.112569 NM_022041 ENSG00000261609 GAN GAN1|KLHL16 gigaxonin protein-coding chr22-852 chr22 25747617 25747827 + 17.9 0.000 intron (NM_001318245, intron 1 of 43) L3b|LINE|CR1 5534 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr16-1819 chr16 47888122 47888332 + 17.9 0.000 intron (NR_110650, intron 4 of 5) intron (NR_110650, intron 4 of 5) -1097 NR_110649 100507534 Hs.407601 NR_110649 ENSG00000261325 LINC02192 - long intergenic non-protein coding RNA 2192 ncRNA chr6-699 chr6 42428662 42428872 + 17.9 0.000 intron (NM_001297573, intron 2 of 17) intron (NM_001297573, intron 2 of 17) 23284 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr14-399 chr14 34060095 34060305 + 17.9 0.000 Intergenic CpG -109126 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr1-1226 chr1 25022811 25023021 + 17.9 0.000 promoter-TSS (NR_039623) promoter-TSS (NR_039623) -587 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr15-553 chr15 43797747 43797957 + 17.9 0.000 intron (NM_001258031, intron 5 of 11) intron (NM_001258031, intron 5 of 11) 2245 NM_001258032 619189 Hs.424126 NM_001258031 ENSG00000184716 SERINC4 - serine incorporator 4 protein-coding chrX-293 chrX 101550218 101550428 + 17.9 0.000 promoter-TSS (NM_016608) promoter-TSS (NM_016608) -224 NM_016608 51309 Hs.9728 NM_016608 ENSG00000126947 ARMCX1 ALEX1|GASP7 armadillo repeat containing X-linked 1 protein-coding chr10-959 chr10 48607185 48607395 + 17.9 0.000 intron (NM_001347738, intron 2 of 10) intron (NM_001347738, intron 2 of 10) -2159 NM_001347737 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr18-336 chr18 48456095 48456305 + 17.9 0.000 Intergenic Intergenic -43615 NM_001371287 chr2-1384 chr2 42420934 42421144 + 17.9 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -52082 NM_001319037 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr1-4047 chr1 203232743 203232953 + 17.9 0.000 Intergenic Intergenic -3175 NR_045784 1118 Hs.201688 NM_003465 ENSG00000133063 CHIT1 CHI3|CHIT|CHITD chitinase 1 protein-coding chr8-769 chr8 23042155 23042365 + 17.9 0.000 intron (NR_027140, intron 1 of 8) intron (NR_027140, intron 1 of 8) -25969 NR_038873 286059 Hs.306673 NR_038873 ENSG00000246130 LOC286059 - TNF receptor superfamily member 10d pseudogene pseudo chr3-433 chr3 140941661 140941871 + 17.9 0.000 promoter-TSS (NM_018155) promoter-TSS (NM_018155) -70 NM_001104647 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr19-1902 chr19 47863455 47863665 + 17.9 0.000 Intergenic Intergenic 22755 NM_003167 6822 Hs.515835 NM_003167 ENSG00000105398 SULT2A1 DHEA-ST|DHEAS|HST|ST2|ST2A1|ST2A3|STD|hSTa sulfotransferase family 2A member 1 protein-coding chr8-891 chr8 42898353 42898563 + 17.9 0.000 intron (NM_032410, intron 1 of 21) intron (NM_032410, intron 1 of 21) 1480 NM_032410 84376 Hs.162852 NM_032410 ENSG00000168172 HOOK3 HK3 hook microtubule tethering protein 3 protein-coding chr8-1229 chr8 118202456 118202666 + 17.9 0.000 intron (NM_001101676, intron 4 of 4) intron (NM_001101676, intron 4 of 4) -90742 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr3-1256 chr3 172218778 172218988 + 17.9 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 178352 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr5-977 chr5 9015743 9015953 + 17.9 0.000 Intergenic Intergenic 38047 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr3-1112 chr3 100100559 100100769 + 17.9 0.000 intron (NM_001042459, intron 1 of 4) L2|LINE|L2 13849 NM_182909 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr17-632 chr17 67490982 67491192 + 17.9 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -19502 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr6-723 chr6 125904966 125905176 + 17.9 0.000 intron (NM_001199621, intron 9 of 14) intron (NM_001199621, intron 9 of 14) -14184 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr4-842 chr4 17447854 17448064 + 17.9 0.000 Intergenic Intergenic 64131 NM_000320 5860 Hs.75438 NM_000320 ENSG00000151552 QDPR DHPR|HDHPR|PKU2|SDR33C1 quinoid dihydropteridine reductase protein-coding chr3-1192 chr3 11610376 11610586 + 17.9 0.000 intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) -5900 NM_001284391 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr19-1659 chr19 48292826 48293036 + 17.9 0.000 Intergenic Intergenic 21644 NM_001369812 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr19-2075 chr19 18878520 18878730 + 17.9 0.000 3' UTR (NM_001290265, exon 6 of 6) 3' UTR (NM_001290265, exon 6 of 6) 17533 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr8-376 chr8 69492610 69492820 + 17.9 0.000 promoter-TSS (NM_001128206) promoter-TSS (NM_001128206) -132 NR_156415 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr11-2058 chr11 71997876 71998086 + 17.9 0.000 promoter-TSS (NM_001039660) promoter-TSS (NM_001039660) -928 NM_001039660 10068 Hs.591967 NM_005699 ENSG00000137496 IL18BP IL18BPa interleukin 18 binding protein protein-coding chr13-498 chr13 48749727 48749937 + 17.9 0.000 Intergenic Intergenic 95903 NM_001308471 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr16-1192 chr16 10918813 10919023 + 17.9 0.000 intron (NR_104444, intron 14 of 17) intron (NR_104444, intron 14 of 17) 23550 NM_014015 28955 Hs.592051 NM_014015 ENSG00000182108 DEXI MYLE Dexi homolog protein-coding chr1-4898 chr1 37537490 37537700 + 17.9 0.000 3' UTR (NM_024700, exon 4 of 4) 3' UTR (NM_024700, exon 4 of 4) 16698 NM_024700 79753 Hs.47232 NM_024700 ENSG00000163877 SNIP1 PML1|PMRED Smad nuclear interacting protein 1 protein-coding chr3-1889 chr3 141959921 141960131 + 17.9 0.000 intron (NM_006286, intron 8 of 10) intron (NM_006286, intron 8 of 10) 40361 NM_001178140 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr20-730 chr20 2747879 2748089 + 17.9 0.000 intron (NM_001110514, intron 7 of 17) intron (NM_001110514, intron 7 of 17) 52643 NM_019609 56265 Hs.659346 NM_019609 ENSG00000088882 CPXM1 CPX1|CPXM carboxypeptidase X, M14 family member 1 protein-coding chr7-818 chr7 24742028 24742238 + 17.9 0.000 intron (NM_004403, intron 3 of 9) intron (NM_004403, intron 3 of 9) 15331 NM_001127453 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr11-3204 chr11 66137655 66137865 + 17.9 0.000 intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 67488 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr7-611 chr7 74477952 74478162 + 17.9 0.000 intron (NM_016328, intron 1 of 26) intron (NM_016328, intron 1 of 26) 24151 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr2-1475 chr2 85277813 85278023 + 17.9 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) 50071 NM_001206840 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr17-979 chr17 13429236 13429446 + 17.9 0.000 Intergenic Intergenic 114305 NR_031679 100302287 NR_031679 ENSG00000221698 MIR548H3 MIR548H-3|MIRN548H3|hsa-mir-548h-3 microRNA 548h-3 ncRNA chr14-503 chr14 49173822 49174032 + 17.9 0.000 Intergenic L1MA8|LINE|L1 412453 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr10-639 chr10 123994771 123994981 + 17.9 0.000 Intergenic Intergenic 97530 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr11-660 chr11 9614191 9614401 + 17.9 0.000 Intergenic CpG 39609 NM_001143976 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr9-1615 chr9 127187664 127187874 + 17.9 0.000 intron (NM_001190729, intron 11 of 17) intron (NM_001190729, intron 11 of 17) -65134 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr8-646 chr8 95801912 95802122 + 17.9 0.000 intron (NR_038204, intron 3 of 3) intron (NR_038204, intron 3 of 3) 146331 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr6-611 chr6 166450458 166450668 + 17.9 0.000 intron (NM_001006932, intron 14 of 21) intron (NM_001006932, intron 14 of 21) 14820 NR_046793 100874353 Hs.675698 NR_046793 ENSG00000232082 RPS6KA2-IT1 - RPS6KA2 intronic transcript 1 ncRNA chr8-738 chr8 19682600 19682810 + 17.9 0.000 promoter-TSS (NM_018371) promoter-TSS (NM_018371) 56 NR_024040 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chrX-192 chrX 123217138 123217348 + 17.9 0.000 intron (NM_007325, intron 2 of 15) intron (NM_007325, intron 2 of 15) 32965 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr20-606 chr20 63738662 63738872 + 17.9 0.000 exon (NM_017806, exon 6 of 6) exon (NM_017806, exon 6 of 6) -1009 NM_020062 56731 Hs.435126 NM_020062 ENSG00000125520 SLC2A4RG GEF|HDBP-1|HDBP1|Si-1-2|Si-1-2-19 SLC2A4 regulator protein-coding chr1-2437 chr1 15075755 15075965 + 17.9 0.000 intron (NM_201628, intron 8 of 14) intron (NM_201628, intron 8 of 14) 76604 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr1-1498 chr1 2139900 2140110 + 17.9 0.000 intron (NR_146911, intron 2 of 15) intron (NR_146911, intron 2 of 15) 35289 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr2-1567 chr2 25544396 25544606 + 17.9 0.000 intron (NM_033147, intron 8 of 19) intron (NM_033147, intron 8 of 19) 105721 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr9-1166 chr9 36597590 36597800 + 17.9 0.000 intron (NM_001256691, intron 4 of 15) intron (NM_001256691, intron 4 of 15) 24800 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr8-965 chr8 97984340 97984550 + 17.9 0.000 intron (NM_001317748, intron 6 of 17) L3|LINE|CR1 57772 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr11-589 chr11 67464769 67464979 + 17.9 0.000 intron (NR_073410, intron 4 of 5) CpG-4565 4377 NR_073412 80194 Hs.288761 NM_025124 ENSG00000172663 TMEM134 - transmembrane protein 134 protein-coding chr3-1017 chr3 119235210 119235420 + 17.9 0.000 intron (NM_212543, intron 2 of 8) intron (NM_212543, intron 2 of 8) 5563 NM_212543 8702 Hs.13225 NM_003778 ENSG00000121578 B4GALT4 B4Gal-T4|beta4Gal-T4 beta-1,4-galactosyltransferase 4 protein-coding chr10-1046 chr10 63554771 63554981 + 17.9 0.000 intron (NM_001001330, intron 1 of 7) intron (NM_001001330, intron 1 of 7) -32986 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr22-294 chr22 38872108 38872318 + 17.9 0.000 promoter-TSS (NM_001303494) promoter-TSS (NM_001303494) 3 NM_001303494 23466 Hs.592201 NM_014292 ENSG00000183741 CBX6 - chromobox 6 protein-coding chr1-1776 chr1 24022801 24023011 + 17.9 0.000 Intergenic Intergenic -42443 NR_034035 10772 Hs.3530 NM_006625 ENSG00000188529 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine and arginine rich splicing factor 10 protein-coding chr10-1017 chr10 59181758 59181968 + 17.9 0.000 intron (NM_001143774, intron 1 of 4) intron (NM_001143774, intron 1 of 4) 4396 NM_001143774 84457 Hs.499704 NM_032439 ENSG00000165443 PHYHIPL - phytanoyl-CoA 2-hydroxylase interacting protein like protein-coding chr2-2047 chr2 156901686 156901896 + 17.9 0.000 Intergenic L1MEi|LINE|L1 -355914 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr3-1072 chr3 97872361 97872571 + 17.9 0.000 exon (NM_153605, exon 4 of 22) exon (NM_153605, exon 4 of 22) 50455 NM_153605 131544 Hs.733378 NM_153605 ENSG00000080200 CRYBG3 DKFZp667G2110|vlAKAP crystallin beta-gamma domain containing 3 protein-coding chr19-1646 chr19 14556580 14556790 + 17.9 0.000 intron (NM_001321170, intron 2 of 13) intron (NM_001321170, intron 2 of 13) 15381 NM_004146 4713 Hs.532853 NM_004146 ENSG00000099795 NDUFB7 B18|CI-B18 NADH:ubiquinone oxidoreductase subunit B7 protein-coding chr12-812 chr12 111636380 111636590 + 17.9 0.000 Intergenic Intergenic -36809 NR_132311 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr2-1312 chr2 45869208 45869418 + 17.9 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 217638 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr15-473 chr15 85479317 85479527 + 17.9 0.000 intron (NM_007200, intron 1 of 36) intron (NM_007200, intron 1 of 36) 98819 NM_007200 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr2-424 chr2 74440502 74440712 + 17.9 0.000 promoter-TSS (NM_001015056) promoter-TSS (NM_001015056) -24 NM_033046 6242 Hs.192854 NM_033046 ENSG00000114993 RTKN - rhotekin protein-coding chr10-2753 chr10 120891479 120891689 + 17.9 0.000 intron (NM_018117, intron 19 of 28) intron (NM_018117, intron 19 of 28) 40222 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr12-928 chr12 110698472 110698682 + 17.9 0.000 Intergenic Intergenic -8800 NM_001040107 84329 Hs.211511 NM_032369 ENSG00000122986 HVCN1 HV1|VSOP hydrogen voltage gated channel 1 protein-coding chr2-1190 chr2 113890797 113891007 + 17.9 0.000 promoter-TSS (NR_110174) promoter-TSS (NR_110174) 90 NR_110174 101060091 Hs.741753 NR_110174 ACTR3-AS1 - ACTR3 antisense RNA 1 ncRNA chr7-1405 chr7 14830159 14830369 + 17.9 0.000 intron (NM_001350717, intron 2 of 24) MamGyp-int|LTR|Gypsy 11186 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr15-643 chr15 38398230 38398440 + 17.9 0.000 Intergenic Intergenic -55792 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr16-705 chr16 2670105 2670315 + 17.9 0.000 non-coding (NR_040023, exon 2 of 3) non-coding (NR_040023, exon 2 of 3) 3229 NR_040023 100507321 Hs.406976 NM_001012731 ERVK13-1 - endogenous retrovirus group K13 member 1 ncRNA chr12-687 chr12 104793336 104793546 + 17.9 0.000 Intergenic Intergenic 164849 NM_001352172 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr5-532 chr5 61162433 61162643 + 17.9 0.000 promoter-TSS (NM_001048249) promoter-TSS (NM_001048249) -70 NM_001048249 643155 Hs.508479 NM_001048249 ENSG00000188725 SMIM15 C5orf43 small integral membrane protein 15 protein-coding chr1-1327 chr1 182615025 182615235 + 17.9 0.000 promoter-TSS (NR_036490) promoter-TSS (NR_036490) -10 NR_036490 284648 Hs.253475 NR_036490 ENSG00000261504 LINC01686 - long intergenic non-protein coding RNA 1686 ncRNA chr2-1600 chr2 151063430 151063640 + 17.9 0.000 Intergenic Intergenic 198328 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr11-1231 chr11 62709547 62709757 + 17.9 0.000 promoter-TSS (NR_037948) promoter-TSS (NR_037948) -33 NR_037949 26580 Hs.533709 NM_032667 ENSG00000168000 BSCL2 GNG3LG|HMN5|PELD|SPG17 BSCL2 lipid droplet biogenesis associated, seipin protein-coding chr16-653 chr16 85436528 85436738 + 17.9 0.000 Intergenic Intergenic -130308 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr11-1384 chr11 130400855 130401065 + 17.9 0.000 intron (NR_148980, intron 5 of 6) MER121|DNA|hAT? 27649 NM_007037 11095 Hs.271605 NM_007037 ENSG00000134917 ADAMTS8 ADAM-TS8|METH2 ADAM metallopeptidase with thrombospondin type 1 motif 8 protein-coding chr10-662 chr10 13684548 13684758 + 17.9 0.000 intron (NM_001318336, intron 14 of 23) intron (NM_001318336, intron 14 of 23) 22914 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr3-1007 chr3 65402737 65402947 + 17.9 0.000 intron (NM_001365904, intron 12 of 24) intron (NM_001365904, intron 12 of 24) -490974 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr3-322 chr3 168095746 168095956 + 17.9 0.000 promoter-TSS (NM_014498) promoter-TSS (NM_014498) 73 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr14-781 chr14 53215540 53215750 + 17.9 0.000 Intergenic Intergenic 62291 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr13-118 chr13 21603891 21604101 + 17.9 0.000 exon (NM_152726, exon 1 of 12) exon (NM_152726, exon 1 of 12) 174 NM_152726 221154 Hs.412103 NM_152726 ENSG00000165487 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding chr8-456 chr8 102128427 102128637 + 17.9 0.000 Intergenic LTR16D|LTR|ERVL 3100 NR_049859 100847001 NR_049859 ENSG00000266756 MIR5680 - microRNA 5680 ncRNA chr18-470 chr18 46899395 46899605 + 17.9 0.000 intron (NM_001324053, intron 3 of 15) AluJb|SINE|Alu 18007 NM_001324057 9063 Hs.57769 NM_004671 ENSG00000078043 PIAS2 ARIP3|DIP|MIZ1|PIASX|SIZ2|ZMIZ4 protein inhibitor of activated STAT 2 protein-coding chr8-1605 chr8 143361989 143362199 + 17.9 0.000 Intergenic Intergenic -2117 NM_001258447 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr4-1061 chr4 98890670 98890880 + 17.9 0.000 intron (NM_001968, intron 3 of 6) intron (NM_001968, intron 3 of 6) 38358 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr4-1142 chr4 37994690 37994900 + 17.9 0.000 intron (NM_001253912, intron 2 of 20) L3|LINE|CR1 34397 NM_006607 10744 Hs.668806 NM_006607 ENSG00000250254 PTTG2 - pituitary tumor-transforming 2 protein-coding chr2-1810 chr2 53787744 53787954 + 17.9 0.000 promoter-TSS (NM_145863) promoter-TSS (NM_145863) 805 NM_015701 27248 Hs.438336 NM_015701 ENSG00000068912 ERLEC1 C2orf30|CIM|CL24936|CL25084|HEL117|XTP3-B|XTP3TPB endoplasmic reticulum lectin 1 protein-coding chr19-1060 chr19 23758384 23758594 + 17.9 0.000 intron (NM_138286, intron 1 of 3) CpG 402 NM_138286 148213 Hs.399952 NM_138286 ENSG00000196172 ZNF681 - zinc finger protein 681 protein-coding chr3-777 chr3 40079508 40079718 + 17.9 0.000 intron (NM_001284425, intron 3 of 15) intron (NM_001284425, intron 3 of 15) -20398 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr13-492 chr13 30342294 30342504 + 17.9 0.000 intron (NR_024464, intron 4 of 4) MIRb|SINE|MIR 31515 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr17-795 chr17 39002345 39002555 + 17.9 0.000 Intergenic L2c|LINE|L2 24660 NR_135645 105371766 Hs.311469 NR_135645 ENSG00000266013 LINC02079 - long intergenic non-protein coding RNA 2079 ncRNA chr16-650 chr16 82170028 82170238 + 17.9 0.000 promoter-TSS (NM_005792) promoter-TSS (NM_005792) 91 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr3-699 chr3 54939955 54940165 + 17.9 0.000 intron (NM_001304389, intron 1 of 2) intron (NM_001304389, intron 1 of 2) -12001 NM_020678 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr4-783 chr4 185425780 185425990 + 17.9 0.000 promoter-TSS (NR_028085) promoter-TSS (NR_028085) 79 NM_018359 55325 Hs.713548 NM_018359 ENSG00000109775 UFSP2 BHD|C4orf20|SEMDDR UFM1 specific peptidase 2 protein-coding chr6-1151 chr6 169536838 169537048 + 17.9 0.000 intron (NR_146875, intron 19 of 20) LTR80A|LTR|ERVL 165086 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr10-804 chr10 50740307 50740517 + 17.9 0.000 intron (NM_001079516, intron 1 of 5) intron (NM_001079516, intron 1 of 5) 476 NM_001321959 653308 Hs.659820 NM_001079516 ENSG00000204147 ASAH2B ASAH2C|ASAH2L|bA449O16.3|bA98I6.3 N-acylsphingosine amidohydrolase 2B protein-coding chr18-528 chr18 74353243 74353453 + 17.9 0.000 exon (NM_001174123, exon 12 of 14) exon (NM_001174123, exon 12 of 14) 37509 NM_001174123 644041 Hs.465414 NM_001174123 ENSG00000206043 C18orf63 DKFZP781G0119 chromosome 18 open reading frame 63 protein-coding chr16-830 chr16 84106449 84106659 + 17.9 0.000 intron (NM_003791, intron 1 of 22) L2a|LINE|L2 10388 NM_003791 8720 Hs.75890 NM_003791 ENSG00000140943 MBTPS1 PCSK8|S1P|SEDKF|SKI-1 membrane bound transcription factor peptidase, site 1 protein-coding chr14-455 chr14 22836411 22836621 + 17.9 0.000 promoter-TSS (NM_004995) promoter-TSS (NM_004995) -69 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr2-2334 chr2 172251377 172251587 + 17.9 0.000 Intergenic Intergenic 148476 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr10-929 chr10 125694895 125695105 + 17.9 0.000 intron (NR_033848, intron 2 of 4) MamRTE1|LINE|RTE-BovB 11757 NR_033848 283038 Hs.144911 NR_033848 ENSG00000228021 LOC283038 - uncharacterized LOC283038 ncRNA chr7-1310 chr7 100132706 100132916 + 17.9 0.000 Intergenic Intergenic 5844 NM_203397 255374 Hs.632319 NM_203397 ENSG00000214309 MBLAC1 - metallo-beta-lactamase domain containing 1 protein-coding chr19-1320 chr19 46864010 46864220 + 17.9 0.000 intron (NM_004491, intron 1 of 6) intron (NM_004491, intron 1 of 6) 3118 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr16-2385 chr16 67339498 67339708 + 17.9 0.000 intron (NM_018296, intron 1 of 13) L1M8|LINE|L1 -7752 NM_001161575 55282 Hs.125139 NM_018296 ENSG00000159708 LRRC36 RORBP70|XLHSRF2 leucine rich repeat containing 36 protein-coding chr12-1074 chr12 26239471 26239681 + 17.9 0.000 Intergenic Intergenic 44003 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr9-893 chr9 130445674 130445884 + 17.9 0.000 intron (NM_054012, intron 1 of 14) intron (NM_054012, intron 1 of 14) 818 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr14-756 chr14 76109438 76109648 + 17.9 0.000 Intergenic Intergenic -42342 NM_001322029 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr6-647 chr6 8180478 8180688 + 17.9 0.000 Intergenic Intergenic -77988 NR_037618 100526837 Hs.719272 NR_037618 EEF1E1-BLOC1S5 EEF1E1-MUTED EEF1E1-BLOC1S5 readthrough (NMD candidate) ncRNA chr10-1297 chr10 48399144 48399354 + 17.9 0.000 intron (NM_001323302, intron 3 of 13) intron (NM_001323302, intron 3 of 13) -2363 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr12-925 chr12 99907228 99907438 + 17.9 0.000 intron (NM_152788, intron 1 of 25) intron (NM_152788, intron 1 of 25) 77321 NM_152788 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chrX-281 chrX 110741406 110741616 + 17.9 0.000 intron (NR_159734, intron 4 of 12) intron (NR_159734, intron 4 of 12) 54306 NM_001143983 91851 Hs.496587 NM_145234 ENSG00000101938 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin like 1 protein-coding chr2-1325 chr2 68936559 68936769 + 17.9 0.000 Intergenic Intergenic 16229 NM_182536 200504 Hs.16757 NM_182536 ENSG00000183607 GKN2 BRICD1B|GDDR|PRO813|TFIZ1|VLTI465 gastrokine 2 protein-coding chr8-896 chr8 52247704 52247914 + 17.9 0.000 intron (NR_148195, intron 2 of 3) intron (NR_148195, intron 2 of 3) 835 NM_001352857 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr6-1148 chr6 166078363 166078573 + 17.9 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -19252 NR_147704 729681 Hs.520550 NR_147704 LOC729681 - uncharacterized LOC729681 ncRNA chr2-1295 chr2 201466354 201466564 + 17.9 0.000 intron (NM_018571, intron 3 of 11) intron (NM_018571, intron 3 of 11) 14719 NM_018571 55437 Hs.652338 NM_018571 ENSG00000082146 STRADB ALS2CR2|CALS-21|ILPIP|ILPIPA|PAPK|PRO1038 STE20 related adaptor beta protein-coding chr10-1764 chr10 32298153 32298363 + 17.9 0.000 intron (NM_001272004, intron 2 of 13) intron (NM_001272004, intron 2 of 13) 48900 NM_001272004 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr15-328 chr15 55993453 55993663 + 17.9 0.000 promoter-TSS (NM_006154) promoter-TSS (NM_006154) 54 NM_006154 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr1-2219 chr1 147225161 147225371 + 17.9 0.000 promoter-TSS (NM_001461) promoter-TSS (NM_001461) 73 NM_001461 2330 Hs.642706 NM_001461 ENSG00000131781 FMO5 - flavin containing dimethylaniline monoxygenase 5 protein-coding chr18-304 chr18 26617207 26617417 + 17.9 0.000 intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) 23032 NM_198991 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr8-1191 chr8 53524299 53524509 + 17.9 0.000 promoter-TSS (NR_149032) promoter-TSS (NR_149032) -439 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr7-735 chr7 56034033 56034243 + 17.9 0.000 5' UTR (NM_001370503, exon 2 of 8) 5' UTR (NM_001370503, exon 2 of 8) 17306 NM_001370511 5723 Hs.512656 NM_004577 ENSG00000146733 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding chr12-1276 chr12 80262982 80263192 + 17.9 0.000 intron (NM_001368062, intron 24 of 62) intron (NM_001368062, intron 24 of 62) 53634 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr9-2710 chr9 88106496 88106706 + 17.9 0.000 Intergenic Intergenic 28384 NM_001166137 645961 Hs.632070 NM_001166137 SPATA31C2 FAM75C2 SPATA31 subfamily C member 2 protein-coding chr15-395 chr15 56208086 56208296 + 17.9 0.000 intron (NM_001370561, intron 4 of 11) L1MC1|LINE|L1 -18259 NM_001370554 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr5-1401 chr5 141279687 141279897 + 17.9 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 24257 NM_031947 83884 Hs.97647 NM_031947 ENSG00000120329 SLC25A2 ORC2|ORNT2 solute carrier family 25 member 2 protein-coding chr7-744 chr7 83468443 83468653 + 17.9 0.000 intron (NM_001178129, intron 3 of 16) intron (NM_001178129, intron 3 of 16) 172883 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr3-672 chr3 63993744 63993954 + 17.9 0.000 intron (NM_001177387, intron 10 of 12) intron (NM_001177387, intron 10 of 12) -10173 NR_038286 100507062 Hs.152536 NR_038286 ENSG00000239653 PSMD6-AS2 - PSMD6 antisense RNA 2 ncRNA chr2-992 chr2 168723173 168723383 + 17.9 0.000 intron (NM_001256126, intron 8 of 10) L3|LINE|CR1 63151 NR_045786 100861402 Hs.506829 NR_045786 ENSG00000227617 CERS6-AS1 - CERS6 antisense RNA 1 ncRNA chr5-1046 chr5 35213727 35213937 + 17.9 0.000 intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) 16655 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr1-2217 chr1 145541187 145541397 + 17.9 0.000 Intergenic L2c|LINE|L2 66566 NR_104217 101929780 Hs.534675 NR_104217 ENSG00000272150 NBPF25P WI2-925H4.1 NBPF member 25, pseudogene pseudo chr11-1618 chr11 64698187 64698397 + 17.9 0.000 intron (NM_015080, intron 2 of 22) intron (NM_015080, intron 2 of 22) 24896 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr10-1571 chr10 1062163 1062373 + 17.9 0.000 intron (NM_014023, intron 1 of 13) intron (NM_014023, intron 1 of 13) -5564 NM_001317955 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr5-1008 chr5 95986082 95986292 + 17.9 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 24186 NR_130776 101929710 NR_130776 ENSG00000251314 LOC101929710 - uncharacterized LOC101929710 ncRNA chr5-1419 chr5 177023349 177023559 + 17.9 0.000 intron (NM_001308213, intron 2 of 8) intron (NM_001308213, intron 2 of 8) 758 NM_001308221 23567 Hs.484259 NM_012279 ENSG00000113761 ZNF346 JAZ|Zfp346 zinc finger protein 346 protein-coding chr2-545 chr2 112275970 112276180 + 17.9 0.000 intron (NM_198581, intron 1 of 11) CpG 478 NM_198581 376940 Hs.190477 NM_198581 ENSG00000188177 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding chr3-686 chr3 25455669 25455879 + 17.9 0.000 intron (NR_110892, intron 1 of 6) intron (NR_110892, intron 1 of 6) -2536 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr1-2463 chr1 65215656 65215866 + 17.9 0.000 intron (NM_001005353, intron 3 of 5) intron (NM_001005353, intron 3 of 5) -48933 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr8-564 chr8 85856538 85856748 + 17.9 0.000 Intergenic Intergenic -28701 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REXO1 like 2, pseudogene pseudo chr1-1363 chr1 30059049 30059259 + 17.9 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -21542 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr10-741 chr10 88152801 88153011 + 17.9 0.000 Intergenic Intergenic 289281 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr1-3647 chr1 67890036 67890246 + 17.9 0.000 intron (NR_040077, intron 1 of 9) L2|LINE|L2 -56674 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr17-975 chr17 4796004 4796214 + 17.9 0.000 promoter-TSS (NM_001270481) promoter-TSS (NM_001270481) -35 NM_001270481 5694 Hs.77060 NM_002798 ENSG00000142507 PSMB6 DELTA|LMPY|Y proteasome subunit beta 6 protein-coding chr2-2024 chr2 108652395 108652605 + 17.9 0.000 intron (NM_001193484, intron 1 of 9) L1MD2|LINE|L1 -2534 NM_001193485 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr9-1583 chr9 88396854 88397064 + 17.9 0.000 intron (NM_006717, intron 1 of 5) Tigger3|DNA|TcMar-Tigger 8515 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr1-3004 chr1 214547497 214547707 + 17.9 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 4000 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr16-978 chr16 80804200 80804410 + 17.9 0.000 5' UTR (NM_152342, exon 1 of 7) 5' UTR (NM_152342, exon 1 of 7) 293 NM_152342 124359 Hs.60257 NM_152342 ENSG00000166446 CDYL2 PCCP1 chromodomain Y like 2 protein-coding chr1-1601 chr1 58432959 58433169 + 17.9 0.000 Intergenic Intergenic 113662 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr11-1476 chr11 117523732 117523942 + 17.9 0.000 intron (NM_020693, intron 5 of 32) intron (NM_020693, intron 5 of 32) 195983 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr16-1529 chr16 57260378 57260588 + 17.9 0.000 intron (NM_015993, intron 2 of 3) intron (NM_015993, intron 2 of 3) 15224 NM_012106 23568 Hs.632873 NM_012106 ENSG00000102931 ARL2BP BART|BART1|RP66 ADP ribosylation factor like GTPase 2 binding protein protein-coding chr4-801 chr4 39933708 39933918 + 17.9 0.000 intron (NM_001100399, intron 2 of 32) LTR67B|LTR|ERVL 44098 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr11-1438 chr11 66883641 66883851 + 17.9 0.000 intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) 24207 NM_022172 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding chr12-1238 chr12 25987216 25987426 + 17.9 0.000 intron (NM_001164747, intron 1 of 5) intron (NM_001164747, intron 1 of 5) 13566 NM_001164747 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr11-1145 chr11 118869959 118870169 + 17.9 0.000 Intergenic Intergenic -13828 NM_001716 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr15-152 chr15 84981021 84981231 + 17.8 0.000 promoter-TSS (NM_002605) promoter-TSS (NM_002605) 659 NM_001243137 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr3-1579 chr3 111695708 111695918 + 17.8 0.000 intron (NM_001185106, intron 1 of 4) MER44D|DNA|TcMar-Tigger -18380 NR_046733 100874115 Hs.626740 NR_046733 PLCXD2-AS1 - PLCXD2 antisense RNA 1 ncRNA chr12-690 chr12 121536289 121536499 + 17.8 0.000 intron (NM_001005366, intron 6 of 22) intron (NM_001005366, intron 6 of 22) 43852 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr15-909 chr15 57122685 57122895 + 17.8 0.000 intron (NM_207038, intron 5 of 19) intron (NM_207038, intron 5 of 19) -96640 NM_001306220 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr8-893 chr8 47659723 47659933 + 17.8 0.000 intron (NM_001352960, intron 1 of 12) intron (NM_001352960, intron 1 of 12) 164 NM_001352960 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr7-1066 chr7 5695736 5695946 + 17.8 0.000 intron (NM_207111, intron 13 of 16) intron (NM_207111, intron 13 of 16) -15380 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr1-1334 chr1 231776089 231776299 + 17.8 0.000 intron (NM_001164547, intron 6 of 7) intron (NM_001164547, intron 6 of 7) 42323 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 ncRNA chr3-863 chr3 125603271 125603481 + 17.8 0.000 Intergenic Intergenic -7879 NM_022776 114885 Hs.477440 NM_022776 ENSG00000144909 OSBPL11 ORP-11|ORP11|OSBP12|TCCCIA00292 oxysterol binding protein like 11 protein-coding chr4-173 chr4 25376998 25377208 + 17.8 0.000 promoter-TSS (NM_001286756) promoter-TSS (NM_001286756) -160 NM_013367 29945 Hs.152173 NM_013367 ENSG00000053900 ANAPC4 APC4 anaphase promoting complex subunit 4 protein-coding chr17-1093 chr17 57946928 57947138 + 17.8 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 8379 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr9-892 chr9 129584232 129584442 + 17.8 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -24547 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr16-1144 chr16 88685248 88685458 + 17.8 0.000 intron (NM_178310, intron 1 of 2) intron (NM_178310, intron 1 of 2) 1154 NM_178310 333929 Hs.673548 NM_178310 ENSG00000185669 SNAI3 SMUC|SNAIL3|ZNF293|Zfp293 snail family transcriptional repressor 3 protein-coding chr16-1386 chr16 75026295 75026505 + 17.8 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 27376 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr20-771 chr20 43939614 43939824 + 17.8 0.000 intron (NM_001098796, intron 1 of 8) MIRb|SINE|MIR -6177 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr3-1121 chr3 158703110 158703320 + 17.8 0.000 intron (NM_206963, intron 4 of 5) L2a|LINE|L2 29242 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr16-1381 chr16 68299012 68299222 + 17.8 0.000 3' UTR (NM_001076785, exon 12 of 12) 3' UTR (NM_001076785, exon 12 of 12) 11829 NM_032178 84138 Hs.729520 NM_032178 ENSG00000103061 SLC7A6OS - solute carrier family 7 member 6 opposite strand protein-coding chr15-768 chr15 84631278 84631488 + 17.8 0.000 promoter-TSS (NR_003654) promoter-TSS (NR_003654) -77 NR_003654 54581 Hs.658114 NM_022050 SCAND2P SCAND2 SCAN domain containing 2 pseudogene pseudo chr1-738 chr1 26695434 26695644 + 17.8 0.000 promoter-TSS (NM_006015) promoter-TSS (NM_006015) -476 NM_139135 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding chr2-1468 chr2 64831419 64831629 + 17.8 0.000 Intergenic Intergenic 32107 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr22-315 chr22 31080986 31081196 + 17.8 0.000 promoter-TSS (NM_006932) promoter-TSS (NM_006932) -227 NM_134269 6525 Hs.149098 NM_006932 ENSG00000183963 SMTN - smoothelin protein-coding chr16-796 chr16 85130431 85130641 + 17.8 0.000 Intergenic L3|LINE|CR1 -6614 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr2-913 chr2 191677957 191678167 + 17.8 0.000 promoter-TSS (NM_001254736) promoter-TSS (NM_001254736) -10 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr6-1368 chr6 71248563 71248773 + 17.8 0.000 Intergenic Intergenic -40143 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr15-549 chr15 40098894 40099104 + 17.8 0.000 intron (NM_001003943, intron 3 of 3) intron (NM_001003943, intron 3 of 3) 7087 NM_001003942 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr8-445 chr8 17923385 17923595 + 17.8 0.000 intron (NM_001352647, intron 1 of 36) CpG 502 NR_148032 5108 Hs.491148 NM_006197 ENSG00000078674 PCM1 PTC4|RET/PCM-1 pericentriolar material 1 protein-coding chr8-1035 chr8 65842075 65842285 + 17.8 0.000 promoter-TSS (NM_001242318) promoter-TSS (NM_001242318) -116 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chr13-703 chr13 41610766 41610976 + 17.8 0.000 intron (NM_015058, intron 39 of 44) intron (NM_015058, intron 39 of 44) -42476 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr5-715 chr5 83844592 83844802 + 17.8 0.000 Intergenic Intergenic -123842 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr1-2706 chr1 224427408 224427618 + 17.8 0.000 intron (NM_001115113, intron 3 of 13) intron (NM_001115113, intron 3 of 13) 6786 NM_025160 80232 Hs.497873 NM_025160 ENSG00000162923 WDR26 CDW2|GID7|MIP2|SKDEAS WD repeat domain 26 protein-coding chr22-768 chr22 37601712 37601922 + 17.8 0.000 Intergenic Intergenic -6657 NM_001363771 26088 Hs.499158 NM_013365 ENSG00000100083 GGA1 - golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding chr10-906 chr10 34815697 34815907 + 17.8 0.000 promoter-TSS (NM_001184785) promoter-TSS (NM_001184785) 34 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr16-644 chr16 56608485 56608695 + 17.8 0.000 promoter-TSS (NM_005953) promoter-TSS (NM_005953) 6 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT-2|MT-II|MT2 metallothionein 2A protein-coding chr6-792 chr6 149864852 149865062 + 17.8 0.000 promoter-TSS (NM_032832) promoter-TSS (NM_032832) -598 NM_032832 84918 Hs.408355 NM_032832 ENSG00000120256 LRP11 MANSC3|bA350J20.3 LDL receptor related protein 11 protein-coding chr9-748 chr9 34634014 34634224 + 17.8 0.000 TTS (NM_001282206) TTS (NM_001282206) 3668 NM_001282205 10280 Hs.522087 NM_005866 ENSG00000147955 SIGMAR1 ALS16|DSMA2|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R sigma non-opioid intracellular receptor 1 protein-coding chr7-1515 chr7 16916194 16916404 + 17.8 0.000 Intergenic LTR78|LTR|ERV1 -34316 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr2-932 chr2 121596446 121596656 + 17.8 0.000 intron (NM_015282, intron 2 of 38) intron (NM_015282, intron 2 of 38) 52911 NM_001142274 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding chrX-112 chrX 154409348 154409558 + 17.8 0.000 promoter-TSS (NM_006730) promoter-TSS (NM_006730) -199 NM_006730 1774 Hs.401929 NM_006730 ENSG00000013563 DNASE1L1 DNAS1L1|DNASEX|DNL1L|G4.8|XIB deoxyribonuclease 1 like 1 protein-coding chr17-618 chr17 81977295 81977505 + 17.8 0.000 promoter-TSS (NM_001251888) promoter-TSS (NM_001251888) -229 NM_001251888 79058 Hs.298351 NM_024083 ENSG00000169696 ASPSCR1 ASPCR1|ASPL|ASPS|RCC17|TUG|UBXD9|UBXN9 ASPSCR1 tether for SLC2A4, UBX domain containing protein-coding chr2-1553 chr2 234880607 234880817 + 17.8 0.000 Intergenic Intergenic -71305 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr2-524 chr2 37156795 37157005 + 17.8 0.000 promoter-TSS (NM_001135651) promoter-TSS (NM_001135651) 80 NM_001135651 5610 Hs.131431 NM_002759 ENSG00000055332 EIF2AK2 EIF2AK1|PKR|PPP1R83|PRKR eukaryotic translation initiation factor 2 alpha kinase 2 protein-coding chr20-321 chr20 62662510 62662720 + 17.8 0.000 TTS (NR_024470) TTS (NR_024470) 4006 NR_024470 100127888 Hs.671273 NR_024470 ENSG00000232803 SLCO4A1-AS1 - SLCO4A1 antisense RNA 1 ncRNA chr18-543 chr18 23032679 23032889 + 17.8 0.000 Intergenic Charlie15a|DNA|hAT-Charlie 98908 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr1-3331 chr1 24803221 24803431 + 17.8 0.000 intron (NM_013943, intron 2 of 5) intron (NM_013943, intron 2 of 5) 57879 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr5-320 chr5 1522155 1522365 + 17.8 0.000 intron (NM_024830, intron 1 of 13) intron (NM_024830, intron 1 of 13) 1700 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr15-160 chr15 80152452 80152662 + 17.8 0.000 promoter-TSS (NM_000137) promoter-TSS (NM_000137) -442 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr3-481 chr3 49805537 49805747 + 17.8 0.000 TTS (NM_001366281) TTS (NM_001366281) 603 NR_049825 100847079 NR_049825 ENSG00000283726 MIR5193 mir-5193 microRNA 5193 ncRNA chrX-525 chrX 47796547 47796757 + 17.8 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -40250 NM_007137 347344 Hs.114246 NM_007137 ENSG00000197779 ZNF81 HFZ20|MRX45|dJ54B20.6 zinc finger protein 81 protein-coding chr16-1374 chr16 56514104 56514314 + 17.8 0.000 intron (NM_031885, intron 2 of 16) intron (NM_031885, intron 2 of 16) 5815 NM_031885 583 Hs.333738 NM_031885 ENSG00000125124 BBS2 BBS|RP74 Bardet-Biedl syndrome 2 protein-coding chr18-113 chr18 49813780 49813990 + 17.8 0.000 promoter-TSS (NR_003003) promoter-TSS (NR_003003) -138 NR_117096 103091864 Hs.646459 NR_117096 ENSG00000267322 SNHG22 SCARNA17|SCARNA17HG small nucleolar RNA host gene 22 ncRNA chr6-1947 chr6 117911575 117911785 + 17.8 0.000 intron (NM_001029858, intron 1 of 7) AluJr|SINE|Alu 4416 NM_001029858 222553 Hs.654841 NM_001029858 ENSG00000196376 SLC35F1 C6orf169|dJ230I3.1 solute carrier family 35 member F1 protein-coding chr11-618 chr11 47185403 47185613 + 17.8 0.000 intron (NM_016223, intron 1 of 10) intron (NM_016223, intron 1 of 10) 373 NM_001184975 29763 Hs.334639 NM_016223 ENSG00000165912 PACSIN3 SDPIII protein kinase C and casein kinase substrate in neurons 3 protein-coding chr9-2255 chr9 88914617 88914827 + 17.8 0.000 Intergenic L1MC1|LINE|L1 -76141 NM_001001938 286223 Hs.585118 NM_001001938 ENSG00000213694 C9orf47 C9orf108|bA791O21.3 chromosome 9 open reading frame 47 protein-coding chr6-1076 chr6 38378999 38379209 + 17.8 0.000 intron (NM_052893, intron 7 of 11) L1MEd|LINE|L1 -102492 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr2-3850 chr2 33377199 33377409 + 17.8 0.000 intron (NM_206943, intron 31 of 33) intron (NM_206943, intron 31 of 33) -41212 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr9-728 chr9 116115772 116115982 + 17.8 0.000 Intergenic Intergenic -37914 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr4-771 chr4 82774707 82774917 + 17.8 0.000 intron (NM_001037582, intron 1 of 4) intron (NM_001037582, intron 1 of 4) -21382 NR_030301 693160 NR_030301 ENSG00000207746 MIR575 MIRN575|hsa-mir-575 microRNA 575 ncRNA chr11-1056 chr11 62862696 62862906 + 17.8 0.000 intron (NM_001012664, intron 1 of 9) intron (NM_001012664, intron 1 of 9) 6692 NM_001012664 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr9-952 chr9 32526137 32526347 + 17.8 0.000 promoter-TSS (NM_014314) promoter-TSS (NM_014314) -46 NM_014314 23586 Hs.190622 NM_014314 ENSG00000107201 DDX58 RIG-I|RIG1|RIGI|RLR-1|SGMRT2 DExD/H-box helicase 58 protein-coding chr5-755 chr5 154194460 154194670 + 17.8 0.000 intron (NM_198321, intron 1 of 11) MIR3|SINE|MIR 3832 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr1-2060 chr1 10681639 10681849 + 17.8 0.000 intron (NM_001079843, intron 4 of 20) intron (NM_001079843, intron 4 of 20) 114902 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr13-457 chr13 20997746 20997956 + 17.8 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) -48423 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr4-725 chr4 163679261 163679471 + 17.8 0.000 intron (NM_001166373, intron 4 of 7) intron (NM_001166373, intron 4 of 7) -65832 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr18-389 chr18 74552076 74552286 + 17.8 0.000 intron (NM_032649, intron 1 of 11) intron (NM_032649, intron 1 of 11) 17681 NM_032649 84735 Hs.400613 NM_032649 ENSG00000150656 CNDP1 CN1|CPGL2|HsT2308 carnosine dipeptidase 1 protein-coding chr19-1066 chr19 45103407 45103617 + 17.8 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 10333 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr10-1101 chr10 74585559 74585769 + 17.8 0.000 intron (NM_001369123, intron 7 of 9) intron (NM_001369123, intron 7 of 9) -56340 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr19-953 chr19 3721546 3721756 + 17.8 0.000 promoter-TSS (NM_001267561) promoter-TSS (NM_001267561) -86 NM_001267561 27134 Hs.25527 NM_014428 ENSG00000105289 TJP3 ZO-3|ZO3 tight junction protein 3 protein-coding chr17-766 chr17 27282273 27282483 + 17.8 0.000 Intergenic MIRb|SINE|MIR 11618 NR_039748 100616277 NR_039748 ENSG00000263583 MIR4522 - microRNA 4522 ncRNA chr14-1494 chr14 39426692 39426902 + 17.8 0.000 intron (NM_203301, intron 1 of 3) L2a|LINE|L2 5703 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr12-228 chr12 92929297 92929507 + 17.8 0.000 promoter-TSS (NM_003566) promoter-TSS (NM_003566) -107 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr4-721 chr4 150283721 150283931 + 17.8 0.000 intron (NM_001367550, intron 54 of 56) Tigger6a|DNA|TcMar-Tigger 205381 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr6-1606 chr6 45480427 45480637 + 17.8 0.000 intron (NM_001015051, intron 5 of 7) intron (NM_001015051, intron 5 of 7) 58257 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr12-711 chr12 101279929 101280139 + 17.8 0.000 promoter-TSS (NM_014503) promoter-TSS (NM_014503) -71 NM_014503 27340 Hs.295732 NM_014503 ENSG00000120800 UTP20 1A6/DRIM|DRIM UTP20 small subunit processome component protein-coding chr20-419 chr20 31720852 31721062 + 17.8 0.000 promoter-TSS (NR_131907) promoter-TSS (NR_131907) -550 NR_131907 103021294 NR_131907 ENSG00000281376 ABALON INXS apoptotic BCL2L1-antisense long non-coding RNA ncRNA chr3-500 chr3 9890524 9890734 + 17.8 0.000 promoter-TSS (NM_001363890) promoter-TSS (NM_001363890) 19 NM_032492 84522 Hs.24054 NM_032492 ENSG00000171135 JAGN1 GL009|SCN6 jagunal homolog 1 protein-coding chr1-2028 chr1 156360103 156360313 + 17.8 0.000 Intergenic L2c|LINE|L2 -9003 NM_001256395 57127 Hs.131835 NM_020407 ENSG00000132677 RHBG SLC42A2 Rh family B glycoprotein (gene/pseudogene) protein-coding chr19-1402 chr19 38559694 38559904 + 17.8 0.000 intron (NM_001042723, intron 88 of 104) MER112|DNA|hAT-Charlie -36548 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr9-1140 chr9 130214780 130214990 + 17.8 0.000 intron (NM_014286, intron 2 of 7) intron (NM_014286, intron 2 of 7) 14485 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr19-911 chr19 4455135 4455345 + 17.8 0.000 promoter-TSS (NM_001171091) promoter-TSS (NM_001171091) 61 NM_001171091 80700 Hs.435255 NM_025241 ENSG00000167671 UBXN6 UBXD1|UBXDC2 UBX domain protein 6 protein-coding chr11-1192 chr11 93741516 93741726 + 17.8 0.000 promoter-TSS (NM_001351989) promoter-TSS (NM_001351989) 27 NM_001286071 28970 Hs.8360 NM_014039 ENSG00000182919 C11orf54 PTD012|PTOD012 chromosome 11 open reading frame 54 protein-coding chr3-673 chr3 69182610 69182820 + 17.8 0.000 exon (NM_015123, exon 20 of 23) exon (NM_015123, exon 20 of 23) -60120 NM_198271 56203 Hs.350621 NM_198271 ENSG00000163380 LMOD3 NEM10 leiomodin 3 protein-coding chr22-387 chr22 18024611 18024821 + 17.8 0.000 promoter-TSS (NM_015241) promoter-TSS (NM_015241) -155 NM_015241 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr11-1120 chr11 19988729 19988939 + 17.8 0.000 intron (NM_182964, intron 11 of 37) AmnSINE1|SINE|5S-Deu-L2 -33722 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr17-1546 chr17 82885236 82885446 + 17.8 0.000 intron (NM_005993, intron 15 of 38) intron (NM_005993, intron 15 of 38) -45319 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr14-421 chr14 74302042 74302252 + 17.8 0.000 intron (NR_148472, intron 1 of 17) L1ME5|LINE|L1 787 NM_001353603 5826 Hs.94395 NM_005050 ENSG00000119688 ABCD4 ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L ATP binding cassette subfamily D member 4 protein-coding chr16-791 chr16 67548247 67548457 + 17.8 0.000 Intergenic Intergenic 10890 NM_001193524 79567 Hs.152717 NM_024519 ENSG00000039523 RIPOR1 FAM65A RHO family interacting cell polarization regulator 1 protein-coding chr1-1338 chr1 1073488 1073698 + 17.8 0.000 intron (NM_001205252, intron 1 of 1) intron (NM_001205252, intron 1 of 1) 713 NM_001205252 401934 Hs.568137 NM_001205252 ENSG00000237330 RNF223 - ring finger protein 223 protein-coding chr6-554 chr6 36546341 36546551 + 17.8 0.000 intron (NM_007271, intron 1 of 13) intron (NM_007271, intron 1 of 13) 1033 NM_001305102 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr22-365 chr22 31490650 31490860 + 17.8 0.000 promoter-TSS (NM_019843) promoter-TSS (NM_019843) -913 NM_019843 56478 Hs.517559 NM_019843 ENSG00000184708 EIF4ENIF1 4E-T|Clast4 eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding chr12-457 chr12 57522435 57522645 + 17.8 0.000 promoter-TSS (NM_052897) promoter-TSS (NM_052897) -284 NM_052897 114785 Hs.524523 NM_052897 ENSG00000166987 MBD6 - methyl-CpG binding domain protein 6 protein-coding chr5-814 chr5 142771248 142771458 + 17.8 0.000 exon (NM_001349547, exon 1 of 22) exon (NM_001349547, exon 1 of 22) 126 NM_001349547 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr1-3266 chr1 214123283 214123493 + 17.8 0.000 Intergenic Intergenic 134855 NM_002763 5629 Hs.741808 NM_002763 ENSG00000117707 PROX1 - prospero homeobox 1 protein-coding chr2-1401 chr2 70977359 70977569 + 17.8 0.000 promoter-TSS (NM_001369683) promoter-TSS (NM_001369683) -981 NM_001369683 79998 Hs.512744 NM_024933 ENSG00000144031 ANKRD53 - ankyrin repeat domain 53 protein-coding chr5-843 chr5 65822676 65822886 + 17.8 0.000 exon (NM_020726, exon 13 of 13) exon (NM_020726, exon 13 of 13) 100576 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chrX-113 chrX 10015021 10015231 + 17.8 0.000 promoter-TSS (NM_015691) promoter-TSS (NM_015691) -629 NM_015691 55841 Hs.527524 NM_015691 ENSG00000047644 WWC3 BM042 WWC family member 3 protein-coding chr17-1205 chr17 78848223 78848433 + 17.8 0.000 Intergenic L1MB4|LINE|L1 -7801 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr1-2336 chr1 235725684 235725894 + 17.8 0.000 intron (NM_000081, intron 38 of 52) intron (NM_000081, intron 38 of 52) -75035 NM_001098721 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr2-2895 chr2 218218626 218218836 + 17.8 0.000 intron (NM_152862, intron 2 of 10) intron (NM_152862, intron 2 of 10) 1334 NM_005731 10109 Hs.529303 NM_005731 ENSG00000163466 ARPC2 ARC34|PNAS-139|PRO2446|p34-Arc actin related protein 2/3 complex subunit 2 protein-coding chr10-681 chr10 125691359 125691569 + 17.8 0.000 intron (NR_033848, intron 2 of 4) intron (NR_033848, intron 2 of 4) 8221 NR_033848 283038 Hs.144911 NR_033848 ENSG00000228021 LOC283038 - uncharacterized LOC283038 ncRNA chr6-1125 chr6 143673681 143673891 + 17.8 0.000 intron (NM_014721, intron 1 of 12) intron (NM_014721, intron 1 of 12) -4179 NM_001100165 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr16-914 chr16 85173069 85173279 + 17.8 0.000 Intergenic Intergenic -34622 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr9-577 chr9 98192947 98193157 + 17.8 0.000 promoter-TSS (NM_052820) promoter-TSS (NM_052820) -415 NM_052820 7464 Hs.113094 NM_003389 ENSG00000106789 CORO2A CLIPINB|IR10|WDR2 coronin 2A protein-coding chr14-716 chr14 102795557 102795767 + 17.8 0.000 intron (NM_001199427, intron 1 of 7) MER21A|LTR|ERVL 18183 NM_145726 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr12-1292 chr12 122679109 122679319 + 17.8 0.000 Intergenic Intergenic 16785 NR_162150 113218511 NR_162150 MIR9902-2 - microRNA 9902-2 ncRNA chr11-2438 chr11 33690408 33690618 + 17.8 0.000 Intergenic LTR44|LTR|ERV1 10227 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr18-571 chr18 60935284 60935494 + 17.8 0.000 Intergenic Intergenic -398041 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr16-1097 chr16 82756112 82756322 + 17.8 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) -17102 NR_110938 101928446 Hs.684007 NR_110938 ENSG00000260862 LOC101928446 - uncharacterized LOC101928446 ncRNA chr20-274 chr20 5113067 5113277 + 17.8 0.000 promoter-TSS (NM_014145) promoter-TSS (NM_014145) -85 NM_014145 29058 Hs.472024 NM_014145 ENSG00000089063 TMEM230 C20orf30|HSPC274|dJ1116H23.2.1 transmembrane protein 230 protein-coding chr22-374 chr22 37634022 37634232 + 17.8 0.000 TTS (NM_001363771) TTS (NM_001363771) -5542 NM_001350055 23616 Hs.601143 NM_018957 ENSG00000100092 SH3BP1 ARHGAP43 SH3 domain binding protein 1 protein-coding chr16-1696 chr16 1723517 1723727 + 17.8 0.000 intron (NM_001040439, intron 1 of 30) (AAAAC)n|Simple_repeat|Simple_repeat -11363 NR_036138 100423012 NR_036138 ENSG00000265820 MIR3177 mir-3177 microRNA 3177 ncRNA chr18-286 chr18 55401930 55402140 + 17.8 0.000 promoter-TSS (NM_001330605) promoter-TSS (NM_001330605) -347 NM_001330605 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr12-719 chr12 6970660 6970870 + 17.8 0.000 promoter-TSS (NM_001267700) promoter-TSS (NM_001267700) -12 NM_001267700 11331 Hs.504620 NM_001144831 ENSG00000215021 PHB2 BAP|BCAP37|Bap37|PNAS-141|REA|hBAP|p22 prohibitin 2 protein-coding chr2-2286 chr2 43075107 43075317 + 17.8 0.000 Intergenic Intergenic 27233 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chr7-1470 chr7 102891712 102891922 + 17.8 0.000 intron (NR_105043, intron 12 of 20) intron (NR_105043, intron 12 of 20) -21183 NM_001031692 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr5-386 chr5 14143027 14143237 + 17.8 0.000 promoter-TSS (NR_134469) promoter-TSS (NR_134469) -210 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr22-782 chr22 43902297 43902507 + 17.8 0.000 Intergenic Intergenic -10389 NM_138814 150379 Hs.248086 NM_138814 ENSG00000100341 PNPLA5 GS2L|dJ388M5|dJ388M5.4 patatin like phospholipase domain containing 5 protein-coding chr19-723 chr19 10654128 10654338 + 17.8 0.000 promoter-TSS (NM_017620) promoter-TSS (NM_017620) -28 NM_017620 3609 Hs.465885 NM_004516 ENSG00000129351 ILF3 CBTF|DRBF|DRBP76|MMP4|MPHOSPH4|MPP4|MPP4110|NF-AT-90|NF110|NF110b|NF90|NF90a|NF90b|NF90c|NF90ctv|NFAR|NFAR-1|NFAR-2|NFAR110|NFAR2|NFAR90|TCP110|TCP80 interleukin enhancer binding factor 3 protein-coding chr6-266 chr6 166382970 166383180 + 17.8 0.000 promoter-TSS (NR_073093) promoter-TSS (NR_073093) -62 NR_073093 51660 Hs.172755 NM_016098 ENSG00000060762 MPC1 BRP44L|CGI-129|MPYCD|SLC54A1 mitochondrial pyruvate carrier 1 protein-coding chr1-1468 chr1 32014639 32014849 + 17.8 0.000 intron (NR_073498, intron 1 of 8) CpG 876 NM_006559 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr1-2773 chr1 149939109 149939319 + 17.8 0.000 3' UTR (NM_020205, exon 12 of 12) 3' UTR (NM_020205, exon 12 of 12) -2335 NM_001145862 10903 Hs.425144 NM_006697 ENSG00000014914 MTMR11 CRA myotubularin related protein 11 protein-coding chr17-757 chr17 76700685 76700895 + 17.8 0.000 intron (NM_198530, intron 1 of 3) L2a|LINE|L2 8807 NR_130926 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr8-365 chr8 47260867 47261077 + 17.8 0.000 promoter-TSS (NM_001282916) promoter-TSS (NM_001282916) 34 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr1-1007 chr1 85975894 85976104 + 17.8 0.000 intron (NM_152890, intron 20 of 59) L1PBa|LINE|L1 180472 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr14-965 chr14 63897811 63898021 + 17.8 0.000 intron (NM_015180, intron 1 of 114) intron (NM_015180, intron 1 of 114) 44912 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr11-1415 chr11 45093045 45093255 + 17.8 0.000 promoter-TSS (NM_001359633) promoter-TSS (NM_001359633) -863 NM_001359633 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr3-982 chr3 189710709 189710919 + 17.8 0.000 intron (NM_003722, intron 1 of 13) intron (NM_003722, intron 1 of 13) -78845 NM_001329150 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr4-1188 chr4 26326970 26327180 + 17.8 0.000 intron (NM_001363577, intron 1 of 10) intron (NM_001363577, intron 1 of 10) 5847 NM_001363577 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr10-1074 chr10 610961 611171 + 17.8 0.000 intron (NM_014974, intron 1 of 36) MSTA|LTR|ERVL-MaLR -17498 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr13-359 chr13 33818144 33818354 + 17.8 0.000 promoter-TSS (NM_002915) promoter-TSS (NM_002915) 100 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr1-1671 chr1 43711560 43711770 + 17.8 0.000 intron (NR_125986, intron 3 of 3) Tigger15a|DNA|TcMar-Tigger 4129 NM_001270460 6487 Hs.597915 NM_006279 ENSG00000126091 ST3GAL3 EIEE15|MRT12|SIAT6|ST3GALII|ST3Gal III|ST3GalIII|ST3N ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding chr12-778 chr12 124289295 124289505 + 17.8 0.000 intron (NM_181709, intron 1 of 2) Tigger19b|DNA|TcMar-Tigger 236 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr18-308 chr18 49072506 49072716 + 17.8 0.000 intron (NM_001353210, intron 16 of 16) intron (NM_001353210, intron 16 of 16) -22843 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr6-1025 chr6 118668955 118669165 + 17.8 0.000 intron (NM_001178035, intron 1 of 13) intron (NM_001178035, intron 1 of 13) -17469 NM_001042475 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr1-1797 chr1 103271615 103271825 + 17.8 0.000 Intergenic HERVL-int|LTR|ERVL -163198 NM_080630 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr7-434 chr7 1011122 1011332 + 17.8 0.000 intron (NR_146964, intron 1 of 4) intron (NR_146964, intron 1 of 4) 11799 NR_029898 442907 NR_029898 ENSG00000199023 MIR339 MIRN339|hsa-mir-339|mir-339 microRNA 339 ncRNA chr4-1349 chr4 188127567 188127777 + 17.8 0.000 Intergenic Intergenic -11769 NM_178556 339976 Hs.348618 NM_178556 ENSG00000184108 TRIML1 RNF209 tripartite motif family like 1 protein-coding chr18-726 chr18 41073740 41073950 + 17.8 0.000 Intergenic Intergenic 446832 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr5-1222 chr5 134439351 134439561 + 17.8 0.000 Intergenic Intergenic -4409 NR_105044 102546229 NR_105044 LOC102546229 - uncharacterized LOC102546229 ncRNA chr3-1813 chr3 49093043 49093253 + 17.8 0.000 intron (NM_017730, intron 1 of 10) intron (NM_017730, intron 1 of 10) 484 NM_001320582 54870 Hs.297389 NM_017730 ENSG00000198218 QRICH1 AB-DIP|VERBRAS glutamine rich 1 protein-coding chr11-816 chr11 46674993 46675203 + 17.8 0.000 non-coding (NR_144422, exon 18 of 18) non-coding (NR_144422, exon 18 of 18) 25521 NM_004308 392 Hs.138860 NM_004308 ENSG00000175220 ARHGAP1 CDC42GAP|RHOGAP|RHOGAP1|p50rhoGAP Rho GTPase activating protein 1 protein-coding chr2-2169 chr2 241465101 241465311 + 17.8 0.000 intron (NM_014808, intron 17 of 26) intron (NM_014808, intron 17 of 26) -12699 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr2-3180 chr2 208164805 208165015 + 17.8 0.000 TTS (NM_001099334) TTS (NM_001099334) -1321 NM_014617 1418 Hs.122566 NM_014617 ENSG00000168582 CRYGA CRY-g-A|CRYG1|CRYG5 crystallin gamma A protein-coding chr10-1169 chr10 30638174 30638384 + 17.8 0.000 Intergenic Intergenic -8526 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr10-1295 chr10 45001223 45001433 + 17.8 0.000 promoter-TSS (NR_126421) promoter-TSS (NR_126421) 405 NM_006963 7570 Hs.462693 NM_006963 ENSG00000165512 ZNF22 HKR-T1|KOX15|ZNF422|Zfp422 zinc finger protein 22 protein-coding chr11-1152 chr11 2307864 2308074 + 17.8 0.000 intron (NM_139022, intron 3 of 9) intron (NM_139022, intron 3 of 9) -4829 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr12-1255 chr12 49198887 49199097 + 17.8 0.000 Intergenic Intergenic -9668 NM_001270399 7846 Hs.654422 NM_006009 ENSG00000167552 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin alpha 1a protein-coding chr7-2301 chr7 82325463 82325673 + 17.8 0.000 intron (NM_000722, intron 3 of 38) intron (NM_000722, intron 3 of 38) 118209 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr9-1485 chr9 126123264 126123474 + 17.8 0.000 Intergenic Intergenic 152546 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr4-632 chr4 23770263 23770473 + 17.8 0.000 Intergenic Intergenic 110924 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr11-683 chr11 1437717 1437927 + 17.8 0.000 intron (NM_003957, intron 2 of 19) intron (NM_003957, intron 2 of 19) 26670 NM_001256630 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr19-678 chr19 37293386 37293596 + 17.8 0.000 Intergenic CpG -19346 NR_138103 284459 Hs.640243 NM_181786 ENSG00000181666 ZNF875 HKR1 zinc finger protein 875 protein-coding chr8-1077 chr8 132893741 132893951 + 17.8 0.000 exon (NM_003235, exon 11 of 48) exon (NM_003235, exon 11 of 48) 26888 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr7-524 chr7 55254831 55255041 + 17.8 0.000 intron (NR_110426, intron 2 of 3) CpG 699 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr8-346 chr8 22245124 22245334 + 17.8 0.000 promoter-TSS (NM_001722) promoter-TSS (NM_001722) 96 NM_001722 661 Hs.148342 NM_001722 ENSG00000168495 POLR3D BN51T|RPC4|RPC53|TSBN51 RNA polymerase III subunit D protein-coding chr10-1921 chr10 133533 133743 + 17.8 0.000 promoter-TSS (NM_212479) promoter-TSS (NM_212479) -655 NR_163254 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr10-836 chr10 123744035 123744245 + 17.8 0.000 Intergenic Intergenic 77785 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr1-543 chr1 147599763 147599973 + 17.8 0.000 intron (NM_004326, intron 1 of 9) CpG 58367 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS BCL9 transcription coactivator protein-coding chr3-420 chr3 129561248 129561458 + 17.8 0.000 intron (NM_015103, intron 29 of 35) intron (NM_015103, intron 29 of 35) 12968 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr22-501 chr22 38802717 38802927 + 17.8 0.000 Intergenic Intergenic -8679 NM_005740 10126 Hs.632766 NM_005740 ENSG00000100246 DNAL4 MRMV3|PIG27 dynein axonemal light chain 4 protein-coding chr13-250 chr13 60397749 60397959 + 17.8 0.000 intron (NM_001146070, intron 1 of 13) CpG 634 NM_001146070 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr12-1452 chr12 124039402 124039612 + 17.8 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 66292 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr17-1249 chr17 28945253 28945463 + 17.8 0.000 TTS (NR_110803) TTS (NR_110803) 6160 NM_001033561 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr5-1908 chr5 167743767 167743977 + 17.8 0.000 intron (NM_001368145, intron 1 of 26) intron (NM_001368145, intron 1 of 26) -11057 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr1-2442 chr1 21817106 21817316 + 17.8 0.000 intron (NM_001013693, intron 3 of 4) L2a|LINE|L2 4946 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr17-1256 chr17 38914821 38915031 + 17.8 0.000 promoter-TSS (NR_106837) promoter-TSS (NR_106837) -53 NR_106837 102465467 NR_106837 ENSG00000277057 MIR6779 hsa-mir-6779 microRNA 6779 ncRNA chr16-897 chr16 2009861 2010071 + 17.8 0.000 promoter-TSS (NM_178167) promoter-TSS (NM_178167) -145 NM_178167 90850 Hs.343828 NM_178167 ENSG00000167962 ZNF598 HEL2 zinc finger protein 598 protein-coding chr7-2229 chr7 129866282 129866492 + 17.8 0.000 intron (NM_001202498, intron 3 of 6) intron (NM_001202498, intron 3 of 6) 86573 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr2-553 chr2 223945158 223945368 + 17.8 0.000 promoter-TSS (NM_020830) promoter-TSS (NM_020830) 72 NM_020830 57590 Hs.368359 NM_020830 ENSG00000085449 WDFY1 FENS-1|FENS1|WDF1|ZFYVE17 WD repeat and FYVE domain containing 1 protein-coding chr3-1716 chr3 69086294 69086504 + 17.8 0.000 intron (NM_006407, intron 1 of 2) intron (NM_006407, intron 1 of 2) 1462 NM_006407 10550 Hs.518060 NM_006407 ENSG00000144746 ARL6IP5 DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx ADP ribosylation factor like GTPase 6 interacting protein 5 protein-coding chr10-1389 chr10 60944230 60944440 + 17.8 0.000 promoter-TSS (NM_001242359) promoter-TSS (NM_001242359) -39 NR_160732 107984236 Hs.742727 NR_160732 LOC107984236 - uncharacterized LOC107984236 ncRNA chr21-130 chr21 46285828 46286038 + 17.8 0.000 promoter-TSS (NM_003906) promoter-TSS (NM_003906) -322 NM_003906 8888 Hs.389037 NM_003906 ENSG00000160294 MCM3AP GANP|MAP80|PNRIID|SAC3 minichromosome maintenance complex component 3 associated protein protein-coding chr2-958 chr2 128422762 128422972 + 17.8 0.000 Intergenic Intergenic -103999 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr19-1285 chr19 50476466 50476676 + 17.8 0.000 promoter-TSS (NM_175063) promoter-TSS (NM_175063) 64 NM_206538 284361 Hs.448941 NM_175063 ENSG00000161671 EMC10 C19orf63|HSM1|HSS1 ER membrane protein complex subunit 10 protein-coding chr11-3298 chr11 95922230 95922440 + 17.8 0.000 intron (NM_001243571, intron 1 of 17) intron (NM_001243571, intron 1 of 17) 1772 NM_201281 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr2-1652 chr2 46236411 46236621 + 17.8 0.000 Intergenic Intergenic -60891 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr6-1116 chr6 131400599 131400809 + 17.8 0.000 Intergenic LTR8B|LTR|ERV1 150300 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr1-2405 chr1 204262259 204262469 + 17.8 0.000 intron (NM_014935, intron 6 of 22) intron (NM_014935, intron 6 of 22) -48376 NM_198447 127845 Hs.532401 NM_198447 ENSG00000174567 GOLT1A CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b golgi transport 1A protein-coding chr4-1057 chr4 81255586 81255796 + 17.8 0.000 Intergenic Intergenic -40469 NM_001363401 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding chr9-497 chr9 128322778 128322988 + 17.8 0.000 promoter-TSS (NM_015679) promoter-TSS (NM_015679) 44 NM_001305942 51117 Hs.98541 NM_016035 ENSG00000167113 COQ4 CGI-92|COQ10D7 coenzyme Q4 protein-coding chr3-1466 chr3 58435200 58435410 + 17.8 0.000 Intergenic Intergenic -1453 NM_001315536 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr16-1837 chr16 64250915 64251125 + 17.8 0.000 Intergenic MER131|DNA?|DNA? 871043 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-2005 chr1 45011937 45012147 + 17.8 0.000 promoter-TSS (NM_000374) promoter-TSS (NM_000374) -212 NR_158184 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr4-1248 chr4 7036311 7036521 + 17.8 0.000 intron (NR_033828, intron 2 of 3) intron (NR_033828, intron 2 of 3) 6585 NM_153376 257236 Hs.656757 NM_153376 ENSG00000173013 CCDC96 - coiled-coil domain containing 96 protein-coding chr5-1336 chr5 150053275 150053485 + 17.8 0.000 TTS (NM_001366501) TTS (NM_001366501) 33260 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr17-1854 chr17 29040363 29040573 + 17.8 0.000 Intergenic Intergenic -2673 NM_016518 51268 Hs.462585 NM_016518 ENSG00000179761 PIPOX LPIPOX pipecolic acid and sarcosine oxidase protein-coding chr7-1881 chr7 95264356 95264566 + 17.8 0.000 intron (NM_017650, intron 11 of 15) intron (NM_017650, intron 11 of 15) 60071 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr1-4702 chr1 244222088 244222298 + 17.8 0.000 Intergenic Intergenic -130442 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr1-2985 chr1 179753066 179753276 + 17.8 0.000 intron (NM_001329719, intron 1 of 4) L1MB1|LINE|L1 9880 NM_173509 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding chr2-638 chr2 240025380 240025590 + 17.8 0.000 promoter-TSS (NM_004544) promoter-TSS (NM_004544) -83 NM_001322019 4705 Hs.277677 NM_004544 ENSG00000130414 NDUFA10 CI-42KD|CI-42k|MC1DN22 NADH:ubiquinone oxidoreductase subunit A10 protein-coding chr11-570 chr11 67379632 67379842 + 17.8 0.000 intron (NR_024469, intron 2 of 3) intron (NR_024469, intron 2 of 3) -5560 NM_001166212 23529 Hs.502977 NM_013246 ENSG00000175505 CLCF1 BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6 cardiotrophin like cytokine factor 1 protein-coding chr19-549 chr19 3477522 3477732 + 17.8 0.000 intron (NM_001136503, intron 3 of 3) (ATGG)n|Simple_repeat|Simple_repeat 2898 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr4-458 chr4 107824741 107824951 + 17.8 0.000 intron (NM_001136258, intron 1 of 6) intron (NM_001136258, intron 1 of 6) 281 NM_001136258 166929 Hs.595423 NM_152621 ENSG00000164023 SGMS2 SMS2 sphingomyelin synthase 2 protein-coding chr1-1282 chr1 153613030 153613240 + 17.8 0.000 promoter-TSS (NR_133645) promoter-TSS (NR_133645) 2 NM_080388 140576 Hs.515714 NM_080388 ENSG00000188643 S100A16 AAG13|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding chr7-519 chr7 5591540 5591750 + 17.8 0.000 Intergenic Intergenic -1171 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr11-1641 chr11 94135144 94135354 + 17.8 0.000 intron (NM_015368, intron 1 of 4) intron (NM_015368, intron 1 of 4) 6408 NM_015368 24145 Hs.591976 NM_015368 ENSG00000110218 PANX1 MRS1|PX1|UNQ2529 pannexin 1 protein-coding chr2-969 chr2 235501420 235501630 + 17.8 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -4226 NR_131900 100506749 Hs.684184 NR_131900 ENSG00000235529 AGAP1-IT1 - AGAP1 intronic transcript 1 ncRNA chr7-801 chr7 76437984 76438194 + 17.8 0.000 intron (NM_001110354, intron 5 of 7) intron (NM_001110354, intron 5 of 7) 13139 NM_001110354 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr2-2318 chr2 109505289 109505499 + 17.8 0.000 TTS (NM_001099289) TTS (NM_001099289) 108273 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr1-1482 chr1 167684004 167684214 + 17.8 0.000 intron (NM_001322924, intron 2 of 4) intron (NM_001322924, intron 2 of 4) -37873 NM_003953 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr4-1277 chr4 61373940 61374150 + 17.8 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 171873 NM_001371342 chr3-501 chr3 46630009 46630219 + 17.8 0.000 Intergenic LTR33A|LTR|ERVL 17589 NM_001195442 100132146 Hs.679623 NM_001195442 ENSG00000283473 FAM240A - family with sequence similarity 240 member A protein-coding chr12-986 chr12 104280811 104281021 + 17.7 0.000 intron (NM_001093771, intron 3 of 16) MLT2D|LTR|ERVL -6116 NM_001261445 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr3-1108 chr3 58306317 58306527 + 17.7 0.000 5' UTR (NM_001348712, exon 1 of 5) 5' UTR (NM_001348712, exon 1 of 5) 177 NM_001348712 109703458 Hs.446320 NM_001348712 ENSG00000255154 HTD2 - hydroxyacyl-thioester dehydratase type 2 protein-coding chr6-1097 chr6 83067644 83067854 + 17.7 0.000 promoter-TSS (NM_001199942) promoter-TSS (NM_001199942) 83 NM_001199942 23033 Hs.520246 NM_015018 ENSG00000083097 DOP1A DOP1|DOPEY1|KIAA1117|dJ202D23.2 DOP1 leucine zipper like protein A protein-coding chr1-2176 chr1 36134984 36135194 + 17.7 0.000 Intergenic Intergenic -9867 NM_001294347 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr15-496 chr15 68581932 68582142 + 17.7 0.000 intron (NM_006091, intron 1 of 11) intron (NM_006091, intron 1 of 11) 3044 NM_006091 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr17-701 chr17 16569045 16569255 + 17.7 0.000 promoter-TSS (NM_001346167) promoter-TSS (NM_001346167) 54 NM_020653 57336 Hs.99724 NM_020653 ENSG00000141040 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding chr15-602 chr15 57526211 57526421 + 17.7 0.000 intron (NM_032866, intron 12 of 18) intron (NM_032866, intron 12 of 18) -65588 NR_104368 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr3-2070 chr3 184156608 184156818 + 17.7 0.000 intron (NM_004423, intron 1 of 14) intron (NM_004423, intron 1 of 14) 1336 NM_004423 1857 Hs.388116 NM_004423 ENSG00000161202 DVL3 DRS3 dishevelled segment polarity protein 3 protein-coding chr2-2835 chr2 112749747 112749957 + 17.7 0.000 intron (NR_130712, intron 6 of 9) LTR50|LTR|ERVL 14757 NM_001304361 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L - cytoskeleton associated protein 2 like protein-coding chr7-1137 chr7 43694489 43694699 + 17.7 0.000 intron (NR_163914, intron 1 of 8) L2a|LINE|L2 34929 NM_001371307 chr1-1902 chr1 201714703 201714913 + 17.7 0.000 intron (NM_020443, intron 2 of 29) intron (NM_020443, intron 2 of 29) -4700 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chr6-1050 chr6 4603334 4603544 + 17.7 0.000 Intergenic MIRc|SINE|MIR -7126 NR_122107 497048 Hs.591355 NM_001011540 ENSG00000205444 KU-MEL-3 - uncharacterized LOC497048 ncRNA chr4-1292 chr4 88743765 88743975 + 17.7 0.000 intron (NM_001015045, intron 13 of 17) intron (NM_001015045, intron 13 of 17) 34081 NR_002806 285512 Hs.744957 NR_002806 ENSG00000248019 FAM13A-AS1 FAM13A1OS|FAM13AOS|NCRNA00039 FAM13A antisense RNA 1 ncRNA chr8-1182 chr8 38793188 38793398 + 17.7 0.000 intron (NM_001352798, intron 2 of 12) intron (NM_001352798, intron 2 of 12) 5187 NM_001352798 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr4-526 chr4 75769081 75769291 + 17.7 0.000 intron (NM_001290049, intron 5 of 25) L2|LINE|L2 44664 NM_003715 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr13-211 chr13 28753700 28753910 + 17.7 0.000 Intergenic Intergenic -34792 NM_001347960 283537 Hs.117167 NM_181785 ENSG00000139508 SLC46A3 FKSG16 solute carrier family 46 member 3 protein-coding chr13-301 chr13 44306425 44306635 + 17.7 0.000 Intergenic Intergenic -67120 NM_001346980 387923 Hs.377972 NM_001010897 ENSG00000151778 SERP2 C13orf21|bA269C23.1 stress associated endoplasmic reticulum protein family member 2 protein-coding chr5-2286 chr5 42561347 42561557 + 17.7 0.000 intron (NM_001242405, intron 1 of 9) intron (NM_001242405, intron 1 of 9) -4009 NM_001242406 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr6-443 chr6 3208261 3208471 + 17.7 0.000 Intergenic Intergenic -12599 NR_038296 100507194 Hs.678053 NR_038295 ENSG00000230269 LINC02525 - long intergenic non-protein coding RNA 2525 ncRNA chr3-760 chr3 48473035 48473245 + 17.7 0.000 promoter-TSS (NM_001272082) promoter-TSS (NM_001272082) 18 NM_001272082 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr16-1667 chr16 68486808 68487018 + 17.7 0.000 Intergenic Intergenic -38405 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr17-2537 chr17 32716836 32717046 + 17.7 0.000 intron (NM_015194, intron 15 of 21) intron (NM_015194, intron 15 of 21) 160183 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr3-1730 chr3 124034310 124034520 + 17.7 0.000 Intergenic Intergenic -42245 NR_133917 54763 Hs.567516 NM_017578 ENSG00000065371 ROPN1 CT91|ODF6|RHPNAP1|ROPN1A|ropporin rhophilin associated tail protein 1 protein-coding chr5-1667 chr5 53333400 53333610 + 17.7 0.000 Intergenic Intergenic -147124 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr22-910 chr22 29115988 29116198 + 17.7 0.000 intron (NM_001039570, intron 3 of 8) L2c|LINE|L2 43058 NM_032045 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 ECTD13|KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr1-1058 chr1 154220532 154220742 + 17.7 0.000 promoter-TSS (NM_001297717) promoter-TSS (NM_001297717) -47 NM_001098616 25912 Hs.287471 NM_015449 ENSG00000143612 C1orf43 HSPC012|NICE-3|NICE3|NS5ATP4|S863-3 chromosome 1 open reading frame 43 protein-coding chr20-445 chr20 20017070 20017280 + 17.7 0.000 promoter-TSS (NM_181528) promoter-TSS (NM_181528) -115 NM_181528 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr16-865 chr16 1443256 1443466 + 17.7 0.000 intron (NM_001143980, intron 3 of 16) intron (NM_001143980, intron 3 of 16) 1128 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr18-255 chr18 23523807 23524017 + 17.7 0.000 intron (NM_001318707, intron 7 of 16) intron (NM_001318707, intron 7 of 16) 20401 NM_013326 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr22-682 chr22 31829753 31829963 + 17.7 0.000 intron (NR_146296, intron 24 of 42) intron (NR_146296, intron 24 of 42) 75835 NM_001369901 9681 Hs.435022 NM_014662 ENSG00000100150 DEPDC5 DEP.5|FFEVF|FFEVF1 DEP domain containing 5 protein-coding chr1-1920 chr1 246699148 246699358 + 17.7 0.000 Intergenic Intergenic -25156 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr8-825 chr8 29493854 29494064 + 17.7 0.000 Intergenic L2|LINE|L2 -143275 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr19-2147 chr19 5546084 5546294 + 17.7 0.000 Intergenic Intergenic 21845 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr17-505 chr17 4948907 4949117 + 17.7 0.000 promoter-TSS (NM_005022) promoter-TSS (NM_005022) 74 NM_005022 5216 Hs.494691 NM_005022 ENSG00000108518 PFN1 ALS18 profilin 1 protein-coding chr5-795 chr5 36876634 36876844 + 17.7 0.000 promoter-TSS (NM_133433) promoter-TSS (NM_133433) -30 NM_015384 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr17-1079 chr17 17170564 17170774 + 17.7 0.000 intron (NM_001364716, intron 16 of 23) intron (NM_001364716, intron 16 of 23) 35664 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr17-2033 chr17 31327919 31328129 + 17.7 0.000 intron (NM_001042492, intron 38 of 57) intron (NM_001042492, intron 38 of 57) -6402 NM_014210 2123 Hs.591198 NM_014210 ENSG00000126860 EVI2A EVDA|EVI-2A|EVI2 ecotropic viral integration site 2A protein-coding chr12-1032 chr12 54579934 54580144 + 17.7 0.000 TTS (NM_001315535) TTS (NM_001315535) 8620 NM_006741 5502 Hs.505662 NM_006741 ENSG00000135447 PPP1R1A I1|IPP1 protein phosphatase 1 regulatory inhibitor subunit 1A protein-coding chr19-1154 chr19 58002609 58002819 + 17.7 0.000 promoter-TSS (NR_036508) promoter-TSS (NR_036508) 106 NM_001348023 80095 Hs.654967 NM_025027 ENSG00000166704 ZNF606 ZNF328 zinc finger protein 606 protein-coding chr3-718 chr3 14947369 14947579 + 17.7 0.000 promoter-TSS (NM_001291694) promoter-TSS (NM_001291694) 31 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr1-1721 chr1 39192184 39192394 + 17.7 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 108122 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr7-1751 chr7 39754806 39755016 + 17.7 0.000 intron (NR_026999, intron 1 of 11) intron (NR_026999, intron 1 of 11) 21343 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr6-552 chr6 24743389 24743599 + 17.7 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -24340 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding chr11-789 chr11 33039352 33039562 + 17.7 0.000 promoter-TSS (NM_018393) promoter-TSS (NM_018393) -115 NM_018393 55346 Hs.655341 NM_018393 ENSG00000176148 TCP11L1 dJ85M6.3 t-complex 11 like 1 protein-coding chr11-1469 chr11 102317241 102317451 + 17.7 0.000 promoter-TSS (NM_001165) promoter-TSS (NM_001165) -138 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr15-1365 chr15 77118737 77118947 + 17.7 0.000 intron (NM_024776, intron 7 of 7) intron (NM_024776, intron 7 of 7) -47733 NM_001168412 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr7-326 chr7 24757474 24757684 + 17.7 0.000 promoter-TSS (NM_001127453) promoter-TSS (NM_001127453) -115 NM_001127453 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr8-1119 chr8 99705995 99706205 + 17.7 0.000 intron (NM_017890, intron 36 of 61) intron (NM_017890, intron 36 of 61) -169239 NR_030596 100126309 NR_030596 ENSG00000216069 MIR875 MIRN875|hsa-mir-875 microRNA 875 ncRNA chr13-563 chr13 30119439 30119649 + 17.7 0.000 Intergenic L3|LINE|CR1 -10669 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chrX-125 chrX 153934823 153935033 + 17.7 0.000 TTS (NM_002910) TTS (NM_002910) 109 NM_001256120 8260 Hs.433291 NM_003491 ENSG00000102030 NAA10 ARD1|ARD1A|ARD1P|DXS707|MCOPS1|NATD|OGDNS|TE2|hARD1 N(alpha)-acetyltransferase 10, NatA catalytic subunit protein-coding chr1-3183 chr1 109532925 109533135 + 17.7 0.000 Intergenic Intergenic -6842 NM_031936 83873 Hs.709782 NM_031936 ENSG00000156097 GPR61 BALGR|GPCR3 G protein-coupled receptor 61 protein-coding chr1-2021 chr1 120132148 120132358 + 17.7 0.000 Intergenic Intergenic 44267 NM_004892 9554 Hs.632438 NM_004892 ENSG00000265808 SEC22B ERS-24|SEC22L1 SEC22 homolog B, vesicle trafficking protein (gene/pseudogene) protein-coding chr19-1047 chr19 48110600 48110810 + 17.7 0.000 5' UTR (NM_003706, exon 1 of 17) 5' UTR (NM_003706, exon 1 of 17) 112 NM_003706 8605 Hs.631562 NM_003706 ENSG00000105499 PLA2G4C CPLA2-gamma phospholipase A2 group IVC protein-coding chr7-2937 chr7 139658821 139659031 + 17.7 0.000 intron (NM_001113239, intron 2 of 14) MER105|DNA|hAT-Charlie 119072 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr4-294 chr4 102431307 102431517 + 17.7 0.000 intron (NR_136202, intron 2 of 4) intron (NR_136202, intron 2 of 4) -69947 NM_003998 4790 Hs.618430 NM_003998 ENSG00000109320 NFKB1 CVID12|EBP-1|KBF1|NF-kB1|NF-kappa-B1|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor kappa B subunit 1 protein-coding chr17-1751 chr17 8563961 8564171 + 17.7 0.000 intron (NM_001256012, intron 7 of 42) intron (NM_001256012, intron 7 of 42) 66659 NM_005964 4628 Hs.16355 NM_005964 ENSG00000133026 MYH10 NMMHC-IIB|NMMHCB myosin heavy chain 10 protein-coding chr2-1685 chr2 127084334 127084544 + 17.7 0.000 5' UTR (NM_001320642, exon 1 of 19) 5' UTR (NM_001320642, exon 1 of 19) 111 NM_001320642 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr12-1443 chr12 108664937 108665147 + 17.7 0.000 intron (NM_001105237, intron 3 of 10) intron (NM_001105237, intron 3 of 10) 29232 NR_039717 100616240 NR_039717 ENSG00000284388 MIR4496 - microRNA 4496 ncRNA chr5-483 chr5 134904676 134904886 + 17.7 0.000 promoter-TSS (NM_032151) promoter-TSS (NM_032151) -339 NM_032151 84105 Hs.710014 NM_032151 ENSG00000132570 PCBD2 DCOH2|DCOHM|PHS2 pterin-4 alpha-carbinolamine dehydratase 2 protein-coding chr16-746 chr16 89174858 89175068 + 17.7 0.000 intron (NM_004933, intron 1 of 13) intron (NM_004933, intron 1 of 13) 3215 NM_004933 1013 Hs.148090 NM_004933 ENSG00000129910 CDH15 CDH14|CDH3|CDHM|MCAD|MRD3 cadherin 15 protein-coding chr4-1071 chr4 119749128 119749338 + 17.7 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 55282 NR_110660 101927007 Hs.143958 NR_110660 ENSG00000250772 LINC01365 - long intergenic non-protein coding RNA 1365 ncRNA chr22-342 chr22 36529910 36530120 + 17.7 0.000 promoter-TSS (NM_003753) promoter-TSS (NM_003753) -849 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr11-1728 chr11 102279762 102279972 + 17.7 0.000 Intergenic Intergenic -37617 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr3-1893 chr3 147038616 147038826 + 17.7 0.000 Intergenic L1PA16|LINE|L1 116798 NR_135560 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr8-1897 chr8 25380277 25380487 + 17.7 0.000 exon (NM_024940, exon 39 of 52) exon (NM_024940, exon 39 of 52) -18870 NR_159962 105379331 NR_159962 LOC105379331 - uncharacterized LOC105379331 ncRNA chr7-1080 chr7 94129865 94130075 + 17.7 0.000 Intergenic Intergenic -125615 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr3-2506 chr3 197661299 197661509 + 17.7 0.000 Intergenic Intergenic 13172 NR_030627 100126321 NR_030627 ENSG00000284146 MIR922 MIRN922|hsa-mir-922 microRNA 922 ncRNA chr17-593 chr17 1561822 1562032 + 17.7 0.000 intron (NM_006224, intron 1 of 11) CpG 865 NM_006224 5306 Hs.429819 NM_006224 ENSG00000174238 PITPNA HEL-S-36|PI-TPalpha|PITPN|VIB1A phosphatidylinositol transfer protein alpha protein-coding chr6-847 chr6 3259579 3259789 + 17.7 0.000 intron (NM_001135750, intron 1 of 1) L2|LINE|L2 737 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr1-2641 chr1 154182426 154182636 + 17.7 0.000 intron (NM_152263, intron 2 of 9) intron (NM_152263, intron 2 of 9) 687 NM_001043352 7170 Hs.535581 NM_152263 ENSG00000143549 TPM3 CAPM1|CFTD|HEL-189|HEL-S-82p|NEM1|OK/SW-cl.5|TM-5|TM3|TM30|TM30nm|TM5|TPM3nu|TPMsk3|TRK|hscp30 tropomyosin 3 protein-coding chr5-1818 chr5 79775872 79776082 + 17.7 0.000 intron (NM_153610, intron 9 of 12) intron (NM_153610, intron 9 of 12) 86141 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr3-2906 chr3 50167189 50167399 + 17.7 0.000 intron (NM_001318798, intron 2 of 17) intron (NM_001318798, intron 2 of 17) 8275 NM_001318800 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chr10-1045 chr10 59513633 59513843 + 17.7 0.000 Intergenic Intergenic -150557 NM_001347840 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr20-712 chr20 47269600 47269810 + 17.7 0.000 intron (NM_001281774, intron 12 of 23) intron (NM_001281774, intron 12 of 23) -48797 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr3-1011 chr3 98855878 98856088 + 17.7 0.000 intron (NM_080927, intron 2 of 15) Charlie24|DNA|hAT-Charlie 45712 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr6-393 chr6 87322501 87322711 + 17.7 0.000 promoter-TSS (NM_001287445) promoter-TSS (NM_001287445) 18 NM_001042493 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr12-1439 chr12 95098369 95098579 + 17.7 0.000 intron (NM_018351, intron 14 of 20) L2b|LINE|L2 -24856 NM_001127362 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding chr6-1336 chr6 34630161 34630371 + 17.7 0.000 intron (NM_022758, intron 2 of 3) MER44B|DNA|TcMar-Tigger -65888 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr5-1296 chr5 14212879 14213089 + 17.7 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 69642 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr10-1033 chr10 119750643 119750853 + 17.7 0.000 intron (NM_014937, intron 1 of 19) intron (NM_014937, intron 1 of 19) 24698 NM_014937 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr3-2529 chr3 37586422 37586632 + 17.7 0.000 intron (NM_002207, intron 15 of 27) intron (NM_002207, intron 15 of 27) 134386 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr18-609 chr18 633647 633857 + 17.7 0.000 intron (NM_199167, intron 6 of 8) LTR10F|LTR|ERV1 17052 NM_199167 27098 Hs.732341 NM_014410 ENSG00000079101 CLUL1 RA337M clusterin like 1 protein-coding chr15-1251 chr15 78206334 78206544 + 17.7 0.000 intron (NM_015162, intron 2 of 13) L2c|LINE|L2 28126 NM_015162 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr10-816 chr10 93039817 93040027 + 17.7 0.000 intron (NM_001319195, intron 20 of 21) L2c|LINE|L2 -20876 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr20-247 chr20 408082 408292 + 17.7 0.000 promoter-TSS (NM_031229) promoter-TSS (NM_031229) -112 NM_006462 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr17-819 chr17 44198788 44198998 + 17.7 0.000 promoter-TSS (NM_020218) promoter-TSS (NM_020218) -732 NM_001098833 56970 Hs.512651 NM_020218 ENSG00000087152 ATXN7L3 - ataxin 7 like 3 protein-coding chr2-1661 chr2 65070185 65070395 + 17.7 0.000 intron (NR_134966, intron 2 of 5) intron (NR_134966, intron 2 of 5) 13874 NM_015147 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr7-548 chr7 151080688 151080898 + 17.7 0.000 promoter-TSS (NM_006712) promoter-TSS (NM_006712) 16 NM_006712 10922 Hs.647094 NM_006712 ENSG00000164896 FASTK FAST Fas activated serine/threonine kinase protein-coding chr7-1419 chr7 32790840 32791050 + 17.7 0.000 Intergenic Intergenic 32659 NR_036501 401321 Hs.627604 NR_036501 LINC00997 - long intergenic non-protein coding RNA 997 ncRNA chr4-514 chr4 139815892 139816102 + 17.7 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 150178 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr14-812 chr14 99602064 99602274 + 17.7 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 2038 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr18-667 chr18 52335039 52335249 + 17.7 0.000 Intergenic MLT1D-int|LTR|ERVL-MaLR -5053 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr3-761 chr3 48507666 48507876 + 17.7 0.000 Intergenic Intergenic -2945 NM_001272066 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr2-2028 chr2 112006208 112006418 + 17.7 0.000 intron (NM_006343, intron 13 of 18) intron (NM_006343, intron 13 of 18) -48956 NM_001329914 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr6-618 chr6 17042695 17042905 + 17.7 0.000 Intergenic L1ME1|LINE|L1 -59458 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr8-706 chr8 99440000 99440210 + 17.7 0.000 intron (NM_017890, intron 22 of 61) intron (NM_017890, intron 22 of 61) 96625 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA chr1-1475 chr1 91845163 91845373 + 17.7 0.000 intron (NR_036634, intron 2 of 17) intron (NR_036634, intron 2 of 17) 40883 NR_036634 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr2-396 chr2 54455989 54456199 + 17.7 0.000 promoter-TSS (NM_003128) promoter-TSS (NM_003128) -233 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr15-377 chr15 49155503 49155713 + 17.7 0.000 promoter-TSS (NM_001352048) promoter-TSS (NM_001352048) -9 NM_004236 9318 Hs.369614 NM_004236 ENSG00000166200 COPS2 ALIEN|CSN2|SGN2|TRIP15 COP9 signalosome subunit 2 protein-coding chr17-1465 chr17 56297207 56297417 + 17.7 0.000 intron (NM_001370326, intron 3 of 20) intron (NM_001370326, intron 3 of 20) 143837 NM_001365758 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr22-200 chr22 20131117 20131327 + 17.7 0.000 promoter-TSS (NM_013373) promoter-TSS (NM_013373) -582 NM_001185024 29801 Hs.63128 NM_013373 ENSG00000099904 ZDHHC8 DHHC8|ZDHHCL1|ZNF378 zinc finger DHHC-type containing 8 protein-coding chr3-1009 chr3 72891118 72891328 + 17.7 0.000 intron (NM_001080393, intron 1 of 6) intron (NM_001080393, intron 1 of 6) 3177 NM_001080393 727936 Hs.710275 NM_001080393 ENSG00000172986 GXYLT2 GLT8D4 glucoside xylosyltransferase 2 protein-coding chr15-811 chr15 75149923 75150133 + 17.7 0.000 Intergenic LTR8|LTR|ERV1 -51854 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr8-897 chr8 54551753 54551963 + 17.7 0.000 Intergenic Intergenic -64238 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr9-820 chr9 70407264 70407474 + 17.7 0.000 intron (NM_001206, intron 1 of 1) intron (NM_001206, intron 1 of 1) 7288 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr5-493 chr5 89037177 89037387 + 17.7 0.000 intron (NR_136221, intron 3 of 6) intron (NR_136221, intron 3 of 6) -133177 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr5-1143 chr5 141529078 141529288 + 17.7 0.000 exon (NM_001314007, exon 21 of 29) exon (NM_001314007, exon 21 of 29) -29128 NR_038333 100505658 Hs.655458 NR_038333 ENSG00000246422 LOC100505658 - uncharacterized LOC100505658 ncRNA chr20-591 chr20 34222245 34222455 + 17.7 0.000 Intergenic Intergenic -38015 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr4-591 chr4 101347749 101347959 + 17.7 0.000 promoter-TSS (NM_000944) promoter-TSS (NM_000944) 77 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr5-1104 chr5 169350781 169350991 + 17.7 0.000 Intergenic Intergenic -49747 NM_003062 6586 Hs.552087 NM_003062 ENSG00000184347 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit guidance ligand 3 protein-coding chr1-1268 chr1 32400979 32401189 + 17.7 0.000 Intergenic Intergenic -6643 NM_001143890 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 - BSD domain containing 1 protein-coding chr5-2881 chr5 96065939 96066149 + 17.7 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) -13094 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr1-3255 chr1 205249062 205249272 + 17.7 0.000 intron (NM_001297611, intron 1 of 3) intron (NM_001297611, intron 1 of 3) 2671 NM_001297611 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr11-1960 chr11 250766 250976 + 17.7 0.000 intron (NM_002817, intron 10 of 12) intron (NM_002817, intron 10 of 12) 13895 NM_002817 5719 Hs.134688 NM_002817 ENSG00000185627 PSMD13 HSPC027|Rpn9|S11|p40.5 proteasome 26S subunit, non-ATPase 13 protein-coding chr1-2627 chr1 110056820 110057030 + 17.7 0.000 Intergenic MIRb|SINE|MIR 13747 NM_006492 257 Hs.669953 NM_006492 ENSG00000156150 ALX3 FND|FND1 ALX homeobox 3 protein-coding chr19-1450 chr19 15288681 15288891 + 17.7 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) -8335 NM_058243 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr2-2038 chr2 128313125 128313335 + 17.7 0.000 intron (NM_004807, intron 1 of 1) L1M5|LINE|L1 5638 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr8-632 chr8 23798654 23798864 + 17.7 0.000 Intergenic Intergenic 56047 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr2-1392 chr2 58918208 58918418 + 17.7 0.000 intron (NR_033873, intron 4 of 13) intron (NR_033873, intron 4 of 13) -299395 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr20-970 chr20 44154623 44154833 + 17.7 0.000 intron (NM_020433, intron 2 of 5) intron (NM_020433, intron 2 of 5) 32460 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr7-1649 chr7 48112476 48112686 + 17.7 0.000 Intergenic Intergenic 23316 NM_003364 7378 Hs.488240 NM_003364 ENSG00000183696 UPP1 UDRPASE|UP|UPASE|UPP uridine phosphorylase 1 protein-coding chr20-164 chr20 50113033 50113243 + 17.7 0.000 promoter-TSS (NM_001257398) promoter-TSS (NM_001257398) 12 NM_001282577 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr13-710 chr13 49098331 49098541 + 17.7 0.000 intron (NM_001079673, intron 3 of 25) intron (NM_001079673, intron 3 of 25) -11881 NM_014923 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr3-969 chr3 102007169 102007379 + 17.7 0.000 Intergenic LTR16A|LTR|ERVL 66415 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr16-1582 chr16 89458709 89458919 + 17.7 0.000 intron (NM_001256182, intron 1 of 13) intron (NM_001256182, intron 1 of 13) 27896 NR_110932 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr6-845 chr6 2196263 2196473 + 17.7 0.000 intron (NM_001500, intron 1 of 10) intron (NM_001500, intron 1 of 10) -20377 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr4-527 chr4 83771226 83771436 + 17.7 0.000 Intergenic Intergenic 235223 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr11-1719 chr11 78460554 78460764 + 17.7 0.000 intron (NM_024678, intron 11 of 13) L2b|LINE|L2 -30823 NR_120564 101928865 Hs.407574 NR_120564 ENSG00000251323 LINC02728 - long intergenic non-protein coding RNA 2728 ncRNA chr10-1197 chr10 114100739 114100949 + 17.7 0.000 Intergenic Intergenic 56978 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr2-1655 chr2 53896929 53897139 + 17.7 0.000 intron (NM_014614, intron 31 of 46) intron (NM_014614, intron 31 of 46) -37001 NM_001164165 100302652 Hs.40763 NM_001164165 ENSG00000270898 GPR75-ASB3 ASB-3|ASB3 GPR75-ASB3 readthrough protein-coding chr10-943 chr10 27240435 27240645 + 17.7 0.000 promoter-TSS (NM_001301254) promoter-TSS (NM_001301254) -54 NM_001301254 91452 Hs.530597 NM_145698 ENSG00000107897 ACBD5 - acyl-CoA binding domain containing 5 protein-coding chr8-1284 chr8 30432985 30433195 + 17.7 0.000 intron (NM_001008710, intron 1 of 8) intron (NM_001008710, intron 1 of 8) -47689 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr5-620 chr5 90529643 90529853 + 17.7 0.000 promoter-TSS (NM_198273) promoter-TSS (NM_198273) -164 NM_001286812 116068 Hs.136235 NM_198273 ENSG00000176018 LYSMD3 - LysM domain containing 3 protein-coding chr19-1116 chr19 18486445 18486655 + 17.7 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 35520 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr17-596 chr17 39402457 39402667 + 17.7 0.000 promoter-TSS (NM_032875) promoter-TSS (NM_032875) -6 NM_001370209 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr7-360 chr7 73738770 73738980 + 17.7 0.000 promoter-TSS (NM_148912) promoter-TSS (NM_148912) -8 NM_001321382 83451 Hs.647045 NM_148912 ENSG00000106077 ABHD11 PP1226|WBSCR21 abhydrolase domain containing 11 protein-coding chr20-219 chr20 543627 543837 + 17.7 0.000 promoter-TSS (NM_001895) promoter-TSS (NM_001895) 58 NM_001362771 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|Cka1|Cka2|OCNDS casein kinase 2 alpha 1 protein-coding chr2-2800 chr2 32479130 32479340 + 17.7 0.000 intron (NM_016252, intron 36 of 73) MIR|SINE|MIR -52918 NR_030285 693143 NR_030285 ENSG00000207653 MIR558 MIRN558|hsa-mir-558 microRNA 558 ncRNA chr2-2503 chr2 160657353 160657563 + 17.7 0.000 Intergenic L1ME1|LINE|L1 -163651 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr19-1386 chr19 11168721 11168931 + 17.7 0.000 intron (NM_001136191, intron 12 of 12) intron (NM_001136191, intron 12 of 12) -13014 NM_001317031 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr4-982 chr4 113762567 113762777 + 17.7 0.000 promoter-TSS (NM_001321585) promoter-TSS (NM_001321585) -745 NM_172127 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr18-259 chr18 55998157 55998367 + 17.7 0.000 Intergenic Intergenic -44016 NR_146511 102724698 NR_146510 ENSG00000267057 LINC01905 - long intergenic non-protein coding RNA 1905 ncRNA chr6-373 chr6 110329910 110330120 + 17.7 0.000 promoter-TSS (NM_001354595) promoter-TSS (NM_001354595) 43 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr1-2681 chr1 201593295 201593505 + 17.7 0.000 Intergenic Intergenic -54922 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr3-1205 chr3 41275042 41275252 + 17.7 0.000 intron (NR_136342, intron 33 of 34) intron (NR_136342, intron 33 of 34) 75642 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr4-1436 chr4 93384977 93385187 + 17.7 0.000 intron (NM_001286838, intron 7 of 14) MamRTE1|LINE|RTE-BovB -443671 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr2-1718 chr2 218687529 218687739 + 17.7 0.000 intron (NM_001369423, intron 11 of 26) MIRb|SINE|MIR 15316 NM_001369423 27148 Hs.471404 NM_015690 ENSG00000163482 STK36 FU serine/threonine kinase 36 protein-coding chr15-1364 chr15 76460928 76461138 + 17.7 0.000 intron (NR_148227, intron 25 of 32) L1MC4a|LINE|L1 124260 NM_145805 64843 Hs.444677 NM_145805 ENSG00000159556 ISL2 - ISL LIM homeobox 2 protein-coding chr18-886 chr18 47163338 47163548 + 17.7 0.000 intron (NM_016097, intron 1 of 2) MER44B|DNA|TcMar-Tigger 12921 NM_016097 51124 Hs.130917 NM_016097 ENSG00000134049 IER3IP1 HSPC039|MEDS|PRO2309 immediate early response 3 interacting protein 1 protein-coding chr22-506 chr22 45318292 45318502 + 17.7 0.000 promoter-TSS (NM_001349913) promoter-TSS (NM_001349913) -46 NM_001349913 55007 Hs.265018 NM_017911 ENSG00000100376 FAM118A C22orf8 family with sequence similarity 118 member A protein-coding chr8-1076 chr8 130349075 130349285 + 17.7 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -52647 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr11-1712 chr11 75014251 75014461 + 17.7 0.000 Intergenic Intergenic 25423 NM_001367862 10825 Hs.191074 NM_006656 ENSG00000162139 NEU3 SIAL3 neuraminidase 3 protein-coding chr7-990 chr7 92159288 92159498 + 17.7 0.000 intron (NM_001161528, intron 1 of 4) intron (NM_001161528, intron 1 of 4) 5883 NM_001161528 401387 Hs.671729 NM_001045475 ENSG00000240720 LRRD1 - leucine rich repeats and death domain containing 1 protein-coding chr5-744 chr5 458930 459140 + 17.7 0.000 intron (NM_007277, intron 6 of 12) intron (NM_007277, intron 6 of 12) 13930 NR_024158 25845 Hs.719132 NR_024158 ENSG00000188242 PP7080 - uncharacterized LOC25845 ncRNA chr2-1182 chr2 43737432 43737642 + 17.7 0.000 intron (NM_172069, intron 19 of 29) MLT1F|LTR|ERVL-MaLR -36502 NM_016008 51626 Hs.371597 NM_015522 ENSG00000138036 DYNC2LI1 CGI-60|D2LIC|LIC3 dynein cytoplasmic 2 light intermediate chain 1 protein-coding chr2-3134 chr2 174631041 174631251 + 17.7 0.000 intron (NM_001077269, intron 1 of 7) L1MB2|LINE|L1 3459 NM_003387 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr13-372 chr13 26074716 26074926 + 17.7 0.000 Intergenic Intergenic -15299 NR_146971 107984009 NR_146971 LINC00415 - long intergenic non-protein coding RNA 415 ncRNA chr12-1318 chr12 47903307 47903517 + 17.7 0.000 intron (NM_001017535, intron 1 of 10) intron (NM_001017535, intron 1 of 10) 1582 NM_000376 7421 Hs.524368 NM_000376 ENSG00000111424 VDR NR1I1|PPP1R163 vitamin D receptor protein-coding chr15-533 chr15 70474853 70475063 + 17.7 0.000 Intergenic Intergenic 30970 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr7-1233 chr7 134907093 134907303 + 17.7 0.000 intron (NM_033139, intron 1 of 12) intron (NM_033139, intron 1 of 12) 15740 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr3-826 chr3 129603289 129603499 + 17.7 0.000 intron (NM_015103, intron 1 of 35) intron (NM_015103, intron 1 of 35) 3345 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr6-1362 chr6 53546379 53546589 + 17.7 0.000 Intergenic Intergenic -1383 NM_001197115 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr14-794 chr14 69631742 69631952 + 17.7 0.000 intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 20251 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr13-543 chr13 99598896 99599106 + 17.7 0.000 Intergenic L1PA13|LINE|L1 -7663 NM_206808 171425 Hs.655642 NM_206808 ENSG00000125246 CLYBL CLB citrate lyase beta like protein-coding chr11-2338 chr11 74567827 74568037 + 17.7 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -24650 NR_046409 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr17-994 chr17 60092138 60092348 + 17.7 0.000 Intergenic Intergenic -3776 NR_030732 645638 Hs.463652 NR_030732 ENSG00000261040 WFDC21P LNCDC|linc-DC|lnc-DC WAP four-disulfide core domain 21, pseudogene pseudo chr5-1177 chr5 40755204 40755414 + 17.7 0.000 intron (NM_012382, intron 1 of 4) intron (NM_012382, intron 1 of 4) 652 NM_012382 23548 Hs.348915 NM_012382 ENSG00000113638 TTC33 OSRF tetratricopeptide repeat domain 33 protein-coding chr20-573 chr20 35557377 35557587 + 17.7 0.000 exon (NM_015966, exon 13 of 13) exon (NM_015966, exon 13 of 13) 15404 NM_015966 51614 Hs.472558 NM_015966 ENSG00000125991 ERGIC3 C20orf47|C2orf47|CGI-54|Erv46|NY-BR-84|PRO0989|SDBCAG84|dJ477O4.2 ERGIC and golgi 3 protein-coding chr3-634 chr3 55330327 55330537 + 17.7 0.000 Intergenic MIR|SINE|MIR 150966 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr10-735 chr10 62131119 62131329 + 17.7 0.000 Intergenic LTR16C|LTR|ERVL 81867 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr12-1104 chr12 389427 389637 + 17.7 0.000 promoter-TSS (NM_001042603) promoter-TSS (NM_001042603) 182 NM_001130147 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr7-1775 chr7 72879977 72880187 + 17.7 0.000 intron (NM_001257190, intron 1 of 15) CpG 725 NM_001367610 9883 Hs.655217 NM_172020 ENSG00000196313 POM121 P145|POM121A POM121 transmembrane nucleoporin protein-coding chr1-1855 chr1 41752200 41752410 + 17.7 0.000 intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 166617 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr2-631 chr2 177264633 177264843 + 17.7 0.000 promoter-TSS (NM_001145413) promoter-TSS (NM_001145413) -11 NM_006164 4780 Hs.744006 NM_006164 ENSG00000116044 NFE2L2 HEBP1|IMDDHH|NRF2 nuclear factor, erythroid 2 like 2 protein-coding chr12-1313 chr12 26918807 26919017 + 17.7 0.000 intron (NM_018164, intron 8 of 16) AluJr|SINE|Alu 19069 NM_018164 55726 Hs.505077 NM_018164 ENSG00000064102 INTS13 ASUN|C12orf11|GCT1|Mat89Bb|NET48|SPATA30 integrator complex subunit 13 protein-coding chr2-3750 chr2 1737332 1737542 + 17.7 0.000 intron (NM_012293, intron 1 of 22) intron (NM_012293, intron 1 of 22) 7078 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-2748 chr2 177352906 177353116 + 17.7 0.000 intron (NR_026966, intron 1 of 8) MIR3|SINE|MIR -39129 NR_106767 102465255 NR_106767 ENSG00000278418 MIR6512 hsa-mir-6512|mir-6512 microRNA 6512 ncRNA chr7-1349 chr7 47578705 47578915 + 17.7 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 3301 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr17-1639 chr17 19773473 19773683 + 17.7 0.000 3' UTR (NM_014683, exon 27 of 27) 3' UTR (NM_014683, exon 27 of 27) -25280 NM_000691 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr2-3859 chr2 36486695 36486905 + 17.7 0.000 intron (NM_016441, intron 7 of 16) intron (NM_016441, intron 7 of 16) 111368 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr1-462 chr1 36155890 36156100 + 17.7 0.000 promoter-TSS (NM_001286365) promoter-TSS (NM_001286365) 58 NM_001270895 27095 Hs.523131 NM_014408 ENSG00000054116 TRAPPC3 BET3 trafficking protein particle complex 3 protein-coding chr15-567 chr15 76196633 76196843 + 17.7 0.000 intron (NM_152335, intron 9 of 10) intron (NM_152335, intron 9 of 10) -15252 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr3-1132 chr3 11465948 11466158 + 17.7 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 102745 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr2-984 chr2 101253128 101253338 + 17.7 0.000 exon (NM_017546, exon 1 of 7) exon (NM_017546, exon 1 of 7) 347 NM_017546 55571 Hs.744080 NM_017546 ENSG00000158435 CNOT11 C2orf29|C40 CCR4-NOT transcription complex subunit 11 protein-coding chr14-1057 chr14 66009118 66009328 + 17.7 0.000 Intergenic Intergenic -477148 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr1-2932 chr1 43493027 43493237 + 17.7 0.000 Intergenic Intergenic -32905 NM_001329138 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr3-994 chr3 38834160 38834370 + 17.7 0.000 Intergenic Intergenic -40255 NM_006514 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr15-565 chr15 75758317 75758527 + 17.7 0.000 Intergenic Intergenic 3893 NR_036198 100423035 NR_036198 ENSG00000284385 MIR4313 - microRNA 4313 ncRNA chr10-1200 chr10 124917815 124918025 + 17.7 0.000 Intergenic Intergenic -24203 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr22-433 chr22 45903560 45903770 + 17.7 0.000 Intergenic Intergenic 73497 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr2-1408 chr2 105081362 105081572 + 17.7 0.000 intron (NM_182640, intron 5 of 10) intron (NM_182640, intron 5 of 10) 21477 NR_110227 101927492 Hs.469537 NR_110227 ENSG00000231851 UTAT33 - uncharacterized LOC101927492 ncRNA chr11-2522 chr11 73759712 73759922 + 17.7 0.000 intron (NM_198896, intron 1 of 7) intron (NM_198896, intron 1 of 7) 276 NM_001243719 5870 Hs.503222 NM_002869 ENSG00000175582 RAB6A RAB6 RAB6A, member RAS oncogene family protein-coding chr20-737 chr20 8782903 8783113 + 17.7 0.000 intron (NM_182734, intron 27 of 32) intron (NM_182734, intron 27 of 32) -48177 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr2-1001 chr2 201652689 201652899 + 17.7 0.000 intron (NM_033066, intron 18 of 21) LTR78|LTR|ERV1 -9291 NM_001044385 65062 Hs.12319 NM_152388 ENSG00000155755 TMEM237 ALS2CR4|JBTS14 transmembrane protein 237 protein-coding chr1-2110 chr1 168082313 168082523 + 17.7 0.000 3' UTR (NM_001349634, exon 8 of 8) 3' UTR (NM_001349634, exon 8 of 8) 54018 NM_001267612 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr7-376 chr7 22083084 22083294 + 17.7 0.000 Intergenic CpG 110556 NM_001367601 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr5-774 chr5 78907415 78907625 + 17.7 0.000 intron (NM_198709, intron 5 of 7) intron (NM_198709, intron 5 of 7) 77790 NM_000046 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr7-1289 chr7 4665779 4665989 + 17.7 0.000 Intergenic L1M5|LINE|L1 -16411 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr17-2867 chr17 31525311 31525521 + 17.7 0.000 intron (NM_001303542, intron 8 of 12) intron (NM_001303542, intron 8 of 12) -9467 NR_039877 100616248 NR_039877 ENSG00000284424 MIR4724 mir-4724 microRNA 4724 ncRNA chr8-1109 chr8 69495138 69495348 + 17.7 0.000 intron (NR_156414, intron 1 of 20) FAM|SINE|Alu 2396 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr11-1431 chr11 65278589 65278799 + 17.7 0.000 intron (NM_002689, intron 5 of 17) intron (NM_002689, intron 5 of 17) 16732 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr7-770 chr7 46291854 46292064 + 17.7 0.000 Intergenic Intergenic -370687 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr5-822 chr5 153408 153618 + 17.7 0.000 intron (NM_052909, intron 7 of 19) L1MEf|LINE|L1 -37982 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr3-985 chr3 8510044 8510254 + 17.7 0.000 intron (NM_001278233, intron 1 of 4) intron (NM_001278233, intron 1 of 4) 8326 NM_001278233 29995 Hs.475353 NM_014583 ENSG00000071282 LMCD1 - LIM and cysteine rich domains 1 protein-coding chr11-919 chr11 132101907 132102117 + 17.7 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) -182290 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr6-812 chr6 47309760 47309970 + 17.7 0.000 promoter-TSS (NM_014452) promoter-TSS (NM_014452) 40 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr10-1115 chr10 104299136 104299346 + 17.7 0.000 exon (NM_183239, exon 7 of 7) exon (NM_183239, exon 7 of 7) 24075 NM_001191015 119391 Hs.107384 NM_183239 ENSG00000065621 GSTO2 GSTO 2-2|bA127L20.1 glutathione S-transferase omega 2 protein-coding chrX-156 chrX 64976357 64976567 + 17.7 0.000 promoter-TSS (NM_018684) promoter-TSS (NM_018684) -12 NM_018684 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr6-1008 chr6 35016583 35016793 + 17.7 0.000 intron (NM_015245, intron 10 of 23) intron (NM_015245, intron 10 of 23) 124651 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr5-855 chr5 118687665 118687875 + 17.7 0.000 Intergenic Intergenic 91582 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chr19-1030 chr19 1942179 1942389 + 17.7 0.000 intron (NM_001319, intron 1 of 11) intron (NM_001319, intron 1 of 11) 1112 NM_001319 1455 Hs.651905 NM_001319 ENSG00000133275 CSNK1G2 CK1g2 casein kinase 1 gamma 2 protein-coding chr2-1456 chr2 19021730 19021940 + 17.6 0.000 intron (NR_135287, intron 2 of 3) intron (NR_135287, intron 2 of 3) 5136 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr5-1833 chr5 102864165 102864375 + 17.6 0.000 intron (NM_001364582, intron 1 of 24) intron (NM_001364582, intron 1 of 24) -1553 NM_001177306 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr1-2172 chr1 31871788 31871998 + 17.6 0.000 Intergenic L2a|LINE|L2 -55842 NM_144569 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chr6-1899 chr6 2581747 2581957 + 17.6 0.000 Intergenic Intergenic -52648 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr14-468 chr14 79279136 79279346 + 17.6 0.000 promoter-TSS (NR_073546) promoter-TSS (NR_073546) -139 NR_073546 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr17-1127 chr17 44086945 44087155 + 17.6 0.000 intron (NM_001015053, intron 13 of 26) intron (NM_001015053, intron 13 of 26) 16139 NR_028582 92579 Hs.294005 NM_138387 ENSG00000141349 G6PC3 SCN4|UGRP glucose-6-phosphatase catalytic subunit 3 protein-coding chr1-2883 chr1 235943677 235943887 + 17.6 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -60069 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr4-645 chr4 122710441 122710651 + 17.6 0.000 Intergenic Intergenic 21912 NR_024041 729338 Hs.647968 NR_024041 CETN4P - centrin 4, pseudogene pseudo chr11-1259 chr11 121964681 121964891 + 17.6 0.000 Intergenic Intergenic 135058 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr1-2779 chr1 165717941 165718151 + 17.6 0.000 Intergenic Intergenic 19296 NR_036683 440700 Hs.568703 NR_036683 ENSG00000215838 LOC440700 - carbonic anhydrase 14 pseudogene pseudo chr1-1081 chr1 23825342 23825552 + 17.6 0.000 promoter-TSS (NM_001166059) promoter-TSS (NM_001166059) 12 NM_001166059 3155 Hs.533444 NM_000191 ENSG00000117305 HMGCL HL 3-hydroxy-3-methylglutaryl-CoA lyase protein-coding chr4-811 chr4 99946084 99946294 + 17.6 0.000 intron (NM_001031723, intron 1 of 7) CpG 429 NM_001278311 79982 Hs.577426 NM_024920 ENSG00000164031 DNAJB14 EGNR9427|PRO34683 DnaJ heat shock protein family (Hsp40) member B14 protein-coding chr17-1577 chr17 40251644 40251854 + 17.6 0.000 intron (NM_133264, intron 1 of 7) intron (NM_133264, intron 1 of 7) 32445 NM_133264 147179 Hs.421622 NM_133264 ENSG00000171475 WIPF2 WICH|WIRE WAS/WASL interacting protein family member 2 protein-coding chr9-1285 chr9 33180918 33181128 + 17.6 0.000 Intergenic L3|LINE|CR1 13164 NR_108108 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr9-903 chr9 33925352 33925562 + 17.6 0.000 intron (NR_163243, intron 18 of 24) intron (NR_163243, intron 18 of 24) 8907 NM_001282530 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr10-1301 chr10 57703794 57704004 + 17.6 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger -399340 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr20-429 chr20 35395881 35396091 + 17.6 0.000 intron (NM_001184977, intron 1 of 7) AluSz|SINE|Alu 15987 NM_018244 55245 Hs.726290 NM_018244 ENSG00000101019 UQCC1 BFZB|C20orf44|CBP3|UQCC ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding chr1-723 chr1 180912584 180912794 + 17.6 0.000 promoter-TSS (NM_020950) promoter-TSS (NM_020950) -208 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr7-1250 chr7 14806911 14807121 + 17.6 0.000 intron (NM_001350717, intron 2 of 24) MLT1K|LTR|ERVL-MaLR 34434 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr6-1006 chr6 27147011 27147221 + 17.6 0.000 promoter-TSS (NM_080593) promoter-TSS (NM_080593) 34 NM_080596 85235 Hs.352225 NM_080596 ENSG00000274997 HIST1H2AH H2A/S|H2AFALii|H2AH|dJ86C11.1 histone cluster 1 H2A family member h protein-coding chr1-4909 chr1 40036696 40036906 + 17.6 0.000 Intergenic Intergenic -3264 NM_001350480 10487 Hs.370581 NM_006367 ENSG00000131236 CAP1 CAP|CAP1-PEN cyclase associated actin cytoskeleton regulatory protein 1 protein-coding chr15-564 chr15 74790747 74790957 + 17.6 0.000 5' UTR (NM_001354988, exon 2 of 15) 5' UTR (NM_001354988, exon 2 of 15) -2095 NR_039738 100616183 NR_039738 ENSG00000264386 MIR4513 - microRNA 4513 ncRNA chr18-349 chr18 2806310 2806520 + 17.6 0.000 Intergenic L1M4b|LINE|L1 -40591 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr6-879 chr6 80547836 80548046 + 17.6 0.000 Intergenic Intergenic 441270 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr14-430 chr14 35122329 35122539 + 17.6 0.000 promoter-TSS (NM_001256681) promoter-TSS (NM_001256681) 108 NM_001305155 55012 Hs.530712 NM_017917 ENSG00000092020 PPP2R3C C14orf10|G4-1|G5pr|GDRM|SPGF36 protein phosphatase 2 regulatory subunit B''gamma protein-coding chr5-1078 chr5 9851552 9851762 + 17.6 0.000 intron (NR_027112, intron 4 of 12) intron (NR_027112, intron 4 of 12) -2720 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA chr11-1183 chr11 69131548 69131758 + 17.6 0.000 Intergenic Intergenic -24282 NM_001369201 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chr6-560 chr6 125940678 125940888 + 17.6 0.000 Intergenic Intergenic -15987 NM_138571 135114 Hs.72325 NM_138571 ENSG00000111911 HINT3 HINT4 histidine triad nucleotide binding protein 3 protein-coding chr9-996 chr9 21102293 21102503 + 17.6 0.000 Intergenic Intergenic -24456 NM_002176 3456 Hs.93177 NM_002176 ENSG00000171855 IFNB1 IFB|IFF|IFN-beta|IFNB interferon beta 1 protein-coding chr14-631 chr14 50000378 50000588 + 17.6 0.000 non-coding (NR_126500, exon 3 of 3) non-coding (NR_126500, exon 3 of 3) 6036 NR_126496 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr5-864 chr5 149561882 149562092 + 17.6 0.000 Intergenic Intergenic -10548 NM_001271741 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding chr6-1020 chr6 90194306 90194516 + 17.6 0.000 intron (NM_021813, intron 4 of 8) intron (NM_021813, intron 4 of 8) 102432 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr6-526 chr6 7726010 7726220 + 17.6 0.000 promoter-TSS (NM_001718) promoter-TSS (NM_001718) 16 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr17-580 chr17 2042192 2042402 + 17.6 0.000 intron (NM_080822, intron 1 of 1) CpG 275 NM_080822 124641 Hs.513856 NM_080822 ENSG00000262664 OVCA2 - OVCA2 serine hydrolase domain containing protein-coding chr1-2013 chr1 86487348 86487558 + 17.6 0.000 intron (NM_001285, intron 7 of 13) intron (NM_001285, intron 7 of 13) 18526 NM_001285 1179 Hs.194659 NM_001285 ENSG00000016490 CLCA1 CACC|CACC1|CLCRG1|CaCC-1|GOB5|hCLCA1|hCaCC-1 chloride channel accessory 1 protein-coding chr17-2293 chr17 40111111 40111321 + 17.6 0.000 Intergenic Intergenic -10627 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|REVERBA|REVERBalpha|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr7-733 chr7 48299699 48299909 + 17.6 0.000 intron (NM_152701, intron 23 of 61) intron (NM_152701, intron 23 of 61) 128346 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr1-1352 chr1 22053370 22053580 + 17.6 0.000 intron (NM_044472, intron 1 of 5) CpG 766 NM_044472 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr14-950 chr14 49987333 49987543 + 17.6 0.000 intron (NR_126498, intron 3 of 3) intron (NR_126498, intron 3 of 3) 5696 NR_126499 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr8-864 chr8 89882697 89882907 + 17.6 0.000 Intergenic L1MEd|LINE|L1 -19066 NM_004337 734 Hs.436445 NM_004337 ENSG00000164823 OSGIN2 C8orf1|hT41 oxidative stress induced growth inhibitor family member 2 protein-coding chr18-356 chr18 49690449 49690659 + 17.6 0.000 Intergenic L1MC4a|LINE|L1 122979 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr1-4962 chr1 53573017 53573227 + 17.6 0.000 intron (NM_147193, intron 3 of 9) L2b|LINE|L2 113723 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr3-1073 chr3 98785130 98785340 + 17.6 0.000 intron (NM_001323367, intron 6 of 9) L2a|LINE|L2 21928 NM_001323368 10402 Hs.148716 NM_006100 ENSG00000064225 ST3GAL6 SIAT10|ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding chr15-606 chr15 64095791 64096001 + 17.6 0.000 promoter-TSS (NM_148955) promoter-TSS (NM_148955) -86 NM_001242933 6642 Hs.188634 NM_003099 ENSG00000028528 SNX1 HsT17379|VPS5 sorting nexin 1 protein-coding chr5-691 chr5 14706709 14706919 + 17.6 0.000 3' UTR (NM_054027, exon 12 of 12) 3' UTR (NM_054027, exon 12 of 12) -5880 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr11-941 chr11 116835902 116836112 + 17.6 0.000 promoter-TSS (NR_126362) promoter-TSS (NR_126362) -110 NR_126362 104326055 Hs.627813 NR_126362 ENSG00000235910 APOA1-AS - APOA1 antisense RNA ncRNA chr4-809 chr4 95045395 95045605 + 17.6 0.000 intron (NM_001256792, intron 1 of 10) L2c|LINE|L2 -6177 NM_001256793 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr6-676 chr6 136526469 136526679 + 17.6 0.000 promoter-TSS (NM_001198618) promoter-TSS (NM_001198618) 32 NM_001198614 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr3-1514 chr3 146067128 146067338 + 17.6 0.000 intron (NR_146297, intron 1 of 1) intron (NR_146297, intron 1 of 1) 1952 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr22-452 chr22 20021986 20022196 + 17.6 0.000 intron (NM_001322167, intron 1 of 6) intron (NM_001322167, intron 1 of 6) 981 NM_152906 128989 Hs.474233 NM_152906 ENSG00000183597 TANGO2 C22orf25|MECRCN transport and golgi organization 2 homolog protein-coding chr5-1490 chr5 112254162 112254372 + 17.6 0.000 intron (NR_110559, intron 3 of 3) L2|LINE|L2 25984 NR_110559 101927023 Hs.571002 NR_110559 ENSG00000251076 LOC101927023 - uncharacterized LOC101927023 ncRNA chr12-2273 chr12 107057103 107057313 + 17.6 0.000 intron (NM_004075, intron 1 of 12) intron (NM_004075, intron 1 of 12) 36341 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr7-1329 chr7 1899391 1899601 + 17.6 0.000 intron (NM_001013837, intron 17 of 18) intron (NM_001013837, intron 17 of 18) 41075 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr13-746 chr13 20174886 20175096 + 17.6 0.000 Intergenic Intergenic -13939 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr13-356 chr13 113583228 113583438 + 17.6 0.000 Intergenic Intergenic -1355 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr4-256 chr4 3388032 3388242 + 17.6 0.000 intron (NM_002926, intron 4 of 16) intron (NM_002926, intron 4 of 16) 17939 NM_198227 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr22-1275 chr22 31952474 31952684 + 17.6 0.000 intron (NM_003405, intron 1 of 1) intron (NM_003405, intron 1 of 1) -7217 NM_015372 25775 Hs.627602 NM_015372 ENSG00000128254 C22orf24 HSN44A4A chromosome 22 open reading frame 24 protein-coding chr6-1469 chr6 35794359 35794569 + 17.6 0.000 TTS (NM_001252598) TTS (NM_001252598) 2859 NM_001252597 1208 Hs.1340 NM_001832 ENSG00000137392 CLPS - colipase protein-coding chr1-2500 chr1 177984190 177984400 + 17.6 0.000 promoter-TSS (NM_001356500) promoter-TSS (NM_001356500) 8 NM_001356500 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr10-1296 chr10 46397009 46397219 + 17.6 0.000 Intergenic Intergenic -1248 NR_033957 643650 Hs.744313 NR_033957 ENSG00000285294 LINC00842 - long intergenic non-protein coding RNA 842 ncRNA chrX-290 chrX 78139494 78139704 + 17.6 0.000 promoter-TSS (NM_015975) promoter-TSS (NM_015975) 51 NM_015975 51616 Hs.592248 NM_015975 ENSG00000187325 TAF9B DN-7|DN7|TAF9L|TAFII31L|TFIID-31 TATA-box binding protein associated factor 9b protein-coding chr19-1769 chr19 15320045 15320255 + 17.6 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) 12389 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr6-541 chr6 125790933 125791143 + 17.6 0.000 promoter-TSS (NM_001122842) promoter-TSS (NM_001122842) 78 NM_001199621 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr13-846 chr13 93244733 93244943 + 17.6 0.000 intron (NM_005708, intron 1 of 8) L1PBa|LINE|L1 18031 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr1-1811 chr1 202498565 202498775 + 17.6 0.000 intron (NM_002481, intron 18 of 23) intron (NM_002481, intron 18 of 23) 35956 NM_032103 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr22-589 chr22 45934659 45934869 + 17.6 0.000 intron (NM_058238, intron 2 of 3) intron (NM_058238, intron 2 of 3) 42398 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chrX-706 chrX 94043853 94044063 + 17.6 0.000 Intergenic MER4A1|LTR|ERV1 369752 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr5-423 chr5 43483815 43484025 + 17.6 0.000 promoter-TSS (NM_022483) promoter-TSS (NM_022483) -55 NM_022483 64417 Hs.732093 NM_022483 ENSG00000151881 TMEM267 C5orf28 transmembrane protein 267 protein-coding chr4-813 chr4 102535480 102535690 + 17.6 0.000 intron (NM_003998, intron 4 of 23) intron (NM_003998, intron 4 of 23) -33099 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chr10-1965 chr10 30062156 30062366 + 17.6 0.000 intron (NM_001350021, intron 1 of 4) Tigger16a|DNA|TcMar-Tigger -2675 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr20-514 chr20 8693736 8693946 + 17.6 0.000 intron (NM_182734, intron 10 of 32) intron (NM_182734, intron 10 of 32) -137344 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr10-510 chr10 69382924 69383134 + 17.6 0.000 intron (NM_033496, intron 10 of 17) intron (NM_033496, intron 10 of 17) 33889 NM_001057 6865 Hs.88372 NM_001057 ENSG00000075073 TACR2 NK2R|NKNAR|SKR|TAC2R tachykinin receptor 2 protein-coding chr13-369 chr13 74575801 74576011 + 17.6 0.000 Intergenic Intergenic 23063 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr1-2445 chr1 28123738 28123948 + 17.6 0.000 Intergenic Intergenic -35206 NM_001282562 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr20-440 chr20 4014024 4014234 + 17.6 0.000 intron (NM_001134338, intron 1 of 6) intron (NM_001134338, intron 1 of 6) 1429 NM_001134338 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr12-1039 chr12 65364091 65364301 + 17.6 0.000 intron (NM_001031679, intron 4 of 6) MLT1J|LTR|ERVL-MaLR 85209 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr9-617 chr9 38392460 38392670 + 17.6 0.000 promoter-TSS (NM_000692) promoter-TSS (NM_000692) -137 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr8-1521 chr8 81364648 81364858 + 17.6 0.000 Intergenic Intergenic 82686 NM_002677 5375 Hs.571512 NM_002677 ENSG00000147588 PMP2 CMT1G|FABP8|M-FABP|MP2|P2 peripheral myelin protein 2 protein-coding chr17-1069 chr17 80544801 80545011 + 17.6 0.000 promoter-TSS (NM_001163034) promoter-TSS (NM_001163034) 68 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr11-726 chr11 67391913 67392123 + 17.6 0.000 promoter-TSS (NM_004584) promoter-TSS (NM_004584) 32 NM_004584 5883 Hs.655354 NM_004584 ENSG00000172613 RAD9A RAD9 RAD9 checkpoint clamp component A protein-coding chr10-472 chr10 68560242 68560452 + 17.6 0.000 promoter-TSS (NM_030625) promoter-TSS (NM_030625) 10 NM_030625 80312 Hs.258855 NM_030625 ENSG00000138336 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding chr1-1630 chr1 156927718 156927928 + 17.6 0.000 intron (NM_144702, intron 8 of 14) CpG-1861 7191 NM_144702 149499 Hs.491734 NM_144702 ENSG00000160838 LRRC71 C1orf92 leucine rich repeat containing 71 protein-coding chr9-1955 chr9 77495850 77496060 + 17.6 0.000 intron (NR_121184, intron 2 of 4) intron (NR_121184, intron 2 of 4) 48306 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr15-546 chr15 37891807 37892017 + 17.6 0.000 Intergenic Intergenic -42695 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr6-1214 chr6 71108115 71108325 + 17.6 0.000 Intergenic Intergenic -151160 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr11-2112 chr11 127994846 127995056 + 17.6 0.000 Intergenic Intergenic -213815 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr10-952 chr10 34299319 34299529 + 17.6 0.000 intron (NM_001184790, intron 18 of 22) intron (NM_001184790, intron 18 of 22) 515872 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr11-2110 chr11 126357249 126357459 + 17.6 0.000 intron (NM_006278, intron 1 of 10) intron (NM_006278, intron 1 of 10) 1342 NM_001348399 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr13-467 chr13 40109503 40109713 + 17.6 0.000 Intergenic Intergenic -72201 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr14-445 chr14 55075549 55075759 + 17.6 0.000 Intergenic L1ME3D|LINE|L1 24007 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding chr14-798 chr14 73785878 73786088 + 17.6 0.000 intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) 1225 NM_001043318 91748 Hs.594157 NM_194278 ENSG00000156030 ELMSAN1 C14orf117|C14orf43|LSR68|MIDEAS|c14_5541 ELM2 and Myb/SANT domain containing 1 protein-coding chr2-3056 chr2 89756604 89756814 + 17.6 0.000 Intergenic L1PBa|LINE|L1 -118802 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr4-1266 chr4 39521630 39521840 + 17.6 0.000 intron (NM_003359, intron 1 of 11) intron (NM_003359, intron 1 of 11) 5704 NM_003359 7358 Hs.572518 NM_003359 ENSG00000109814 UGDH GDH|UDP-GlcDH|UDPGDH|UGD UDP-glucose 6-dehydrogenase protein-coding chr13-251 chr13 79481081 79481291 + 17.6 0.000 promoter-TSS (NR_046685) promoter-TSS (NR_046685) 45 NR_046685 100874208 Hs.602801 NR_046685 ENSG00000232132 NDFIP2-AS1 - NDFIP2 antisense RNA 1 ncRNA chr15-677 chr15 85358028 85358238 + 17.6 0.000 Intergenic Intergenic -22463 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr1-2240 chr1 168321907 168322117 + 17.6 0.000 Intergenic L2c|LINE|L2 41135 NM_005149 9095 Hs.716656 NM_005149 ENSG00000143178 TBX19 TBS19|TPIT|dJ747L4.1 T-box transcription factor 19 protein-coding chr13-382 chr13 113864669 113864879 + 17.6 0.000 promoter-TSS (NM_000820) promoter-TSS (NM_000820) 597 NR_044993 100506394 Hs.132168 NR_044993 ENSG00000272695 GAS6-DT GAS6-AS2 GAS6 divergent transcript ncRNA chr20-243 chr20 41136931 41137141 + 17.6 0.000 promoter-TSS (NM_002660) promoter-TSS (NM_002660) -507 NM_182811 5335 Hs.268177 NM_002660 ENSG00000124181 PLCG1 NCKAP3|PLC-II|PLC1|PLC148|PLCgamma1 phospholipase C gamma 1 protein-coding chr7-920 chr7 158696170 158696380 + 17.6 0.000 intron (NM_001281932, intron 3 of 28) MLT1H1|LTR|ERVL-MaLR 8529 NM_017760 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr17-1914 chr17 71237925 71238135 + 17.6 0.000 Intergenic Intergenic -35851 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr12-1869 chr12 52331445 52331655 + 17.6 0.000 Intergenic L2c|LINE|L2 -10152 NM_002282 3889 Hs.720768 NM_002282 ENSG00000170523 KRT83 EKVP5|HB3|Hb-3|KRTHB3|MNLIX keratin 83 protein-coding chr9-542 chr9 136245650 136245860 + 17.6 0.000 promoter-TSS (NM_181701) promoter-TSS (NM_181701) 86 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr2-1342 chr2 159516324 159516534 + 17.6 0.000 intron (NM_001329858, intron 2 of 36) intron (NM_001329858, intron 2 of 36) -98865 NR_110587 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA chr8-1092 chr8 23349673 23349883 + 17.6 0.000 intron (NM_002318, intron 3 of 13) intron (NM_002318, intron 3 of 13) 13570 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr16-1128 chr16 67092289 67092499 + 17.6 0.000 intron (NM_001755, intron 5 of 5) intron (NM_001755, intron 5 of 5) -17547 NM_001320540 80262 Hs.513666 NM_025187 ENSG00000125149 C16orf70 C16orf6|LIN10|lin-10 chromosome 16 open reading frame 70 protein-coding chr19-1092 chr19 44848024 44848234 + 17.6 0.000 intron (NM_001042724, intron 1 of 8) intron (NM_001042724, intron 1 of 8) 1832 NM_002856 5819 Hs.655455 NM_002856 ENSG00000130202 NECTIN2 CD112|HVEB|PRR2|PVRL2|PVRR2 nectin cell adhesion molecule 2 protein-coding chr13-404 chr13 109243429 109243639 + 17.6 0.000 Intergenic Intergenic -76231 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr2-1288 chr2 158600327 158600537 + 17.6 0.000 intron (NM_001005476, intron 3 of 20) intron (NM_001005476, intron 3 of 20) 134570 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr7-640 chr7 25180415 25180625 + 17.6 0.000 promoter-TSS (NM_001371351) promoter-TSS (NM_001371351) -166 NM_001371351 chr2-1725 chr2 228049026 228049236 + 17.6 0.000 intron (NM_030623, intron 3 of 10) MIR|SINE|MIR 132514 NM_030623 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chrX-174 chrX 78659568 78659778 + 17.6 0.000 promoter-TSS (NM_152694) promoter-TSS (NM_152694) -345 NM_152694 203430 Hs.134873 NM_152694 ENSG00000179300 RTL3 Mar3|Mart3|SIRH9|ZCCHC5|ZHC5 retrotransposon Gag like 3 protein-coding chr2-1556 chr2 239295663 239295873 + 17.6 0.000 intron (NM_006037, intron 2 of 26) (CAC)n|Simple_repeat|Simple_repeat -9694 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr3-1775 chr3 10242402 10242612 + 17.6 0.000 3' UTR (NM_001570, exon 13 of 13) 3' UTR (NM_001570, exon 13 of 13) -5952 NM_014760 9797 Hs.475401 NM_014760 ENSG00000157014 TATDN2 - TatD DNase domain containing 2 protein-coding chr17-865 chr17 75896808 75897018 + 17.6 0.000 promoter-TSS (NM_173547) promoter-TSS (NM_173547) 38 NM_001256124 201292 Hs.189823 NM_173547 ENSG00000141569 TRIM65 4732463G12Rik tripartite motif containing 65 protein-coding chr14-736 chr14 22777557 22777767 + 17.6 0.000 intron (NM_001126105, intron 5 of 10) intron (NM_001126105, intron 5 of 10) 10974 NM_005015 5018 Hs.151134 NM_005015 ENSG00000155463 OXA1L OXA1 OXA1L mitochondrial inner membrane protein protein-coding chr7-1134 chr7 34321229 34321439 + 17.6 0.000 Intergenic Intergenic -336884 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr12-1127 chr12 64616085 64616295 + 17.6 0.000 intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) 5695 NM_178169 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr11-1402 chr11 9566000 9566210 + 17.6 0.000 Intergenic Intergenic -7565 NM_003390 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr1-3005 chr1 215274078 215274288 + 17.6 0.000 Intergenic Intergenic 191446 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr11-1185 chr11 71864051 71864261 + 17.6 0.000 Intergenic Intergenic -14297 NM_001242853 100129216 Hs.740246 NM_001242853 ENSG00000225805 DEFB131B - defensin beta 131B protein-coding chr3-1663 chr3 173739836 173740046 + 17.6 0.000 intron (NM_001365928, intron 3 of 6) intron (NM_001365928, intron 3 of 6) 155507 NM_001365934 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr1-2166 chr1 27351365 27351575 + 17.6 0.000 exon (NM_001193308, exon 13 of 15) exon (NM_001193308, exon 13 of 15) 9448 NM_032872 84958 Hs.469175 NM_032872 ENSG00000142765 SYTL1 JFC1|SLP1 synaptotagmin like 1 protein-coding chr4-1690 chr4 155288860 155289070 + 17.6 0.000 Intergenic L1MC1|LINE|L1 -65251 NR_125937 102724776 Hs.61271 NR_125937 ENSG00000250910 LOC102724776 - uncharacterized LOC102724776 ncRNA chr10-772 chr10 5594777 5594987 + 17.6 0.000 TTS (NR_134491) TTS (NR_134491) 1236 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr16-788 chr16 66895255 66895465 + 17.6 0.000 Intergenic Intergenic 14845 NM_001329929 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr13-500 chr13 51681030 51681240 + 17.6 0.000 intron (NM_052950, intron 3 of 11) MamGypsy2-I|LTR|Gypsy 96673 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr5-1184 chr5 59127728 59127938 + 17.6 0.000 intron (NM_001364603, intron 5 of 15) intron (NM_001364603, intron 5 of 15) -88357 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr8-900 chr8 76698727 76698937 + 17.6 0.000 intron (NM_024721, intron 1 of 10) intron (NM_024721, intron 1 of 10) -15557 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA chr6-1651 chr6 142014665 142014875 + 17.6 0.000 Intergenic LTR30|LTR|ERV1 74029 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr20-756 chr20 33863088 33863298 + 17.6 0.000 Intergenic Intergenic 51845 NM_176812 128866 Hs.472471 NM_176812 ENSG00000101421 CHMP4B C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4 charged multivesicular body protein 4B protein-coding chr19-1206 chr19 2049588 2049798 + 17.6 0.000 intron (NM_199054, intron 2 of 13) intron (NM_199054, intron 2 of 13) 1551 NM_017572 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr12-1078 chr12 40728021 40728231 + 17.6 0.000 intron (NM_001256063, intron 1 of 15) intron (NM_001256063, intron 1 of 15) 35684 NM_001256063 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr21-264 chr21 45154743 45154953 + 17.6 0.000 intron (NM_001346687, intron 1 of 11) intron (NM_001346687, intron 1 of 11) 2318 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr17-1313 chr17 77160194 77160404 + 17.6 0.000 intron (NM_001143999, intron 3 of 16) intron (NM_001143999, intron 3 of 16) 19330 NM_001143999 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr19-859 chr19 16386716 16386926 + 17.6 0.000 intron (NM_021235, intron 19 of 22) L1MEf|LINE|L1 61995 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr5-537 chr5 78243825 78244035 + 17.6 0.000 intron (NM_003664, intron 2 of 26) L2a|LINE|L2 50768 NM_001271769 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding chr22-556 chr22 27531861 27532071 + 17.6 0.000 Intergenic Intergenic 221315 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr1-1991 chr1 8314494 8314704 + 17.6 0.000 Intergenic Intergenic -3486 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr10-496 chr10 133252434 133252644 + 17.6 0.000 Intergenic Intergenic -4654 NR_108078 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG - MIR202 host gene ncRNA chr6-1722 chr6 35370233 35370443 + 17.6 0.000 intron (NM_001171819, intron 2 of 6) intron (NM_001171819, intron 2 of 6) 27780 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr2-1186 chr2 75710738 75710948 + 17.6 0.000 promoter-TSS (NM_003203) promoter-TSS (NM_003203) 72 NM_001201335 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr17-1764 chr17 28380347 28380557 + 17.6 0.000 intron (NM_015077, intron 1 of 8) L2a|LINE|L2 8758 NM_015077 23098 Hs.743510 NM_015077 ENSG00000004139 SARM1 MyD88-5|SAMD2|SARM sterile alpha and TIR motif containing 1 protein-coding chr12-799 chr12 1346163 1346373 + 17.6 0.000 intron (NR_027948, intron 15 of 19) HAL1b|LINE|L1 -154223 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr14-177 chr14 105380400 105380610 + 17.6 0.000 intron (NM_015197, intron 11 of 23) intron (NM_015197, intron 11 of 23) -18033 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding chr3-1692 chr3 29140787 29140997 + 17.6 0.000 Intergenic Intergenic 140047 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr8-546 chr8 17770478 17770688 + 17.6 0.000 intron (NM_001363061, intron 1 of 14) intron (NM_001363061, intron 1 of 14) 30334 NM_001001925 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr12-368 chr12 50763809 50764019 + 17.6 0.000 promoter-TSS (NM_005171) promoter-TSS (NM_005171) -187 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr12-1268 chr12 62725056 62725266 + 17.6 0.000 intron (NM_020700, intron 5 of 9) Kanga1b|DNA|TcMar-Tc2 121475 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr9-825 chr9 107650452 107650662 + 17.6 0.000 Intergenic MIRc|SINE|MIR -160788 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr3-766 chr3 94062905 94063115 + 17.6 0.000 promoter-TSS (NM_001195643) promoter-TSS (NM_001195643) -51 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr2-2327 chr2 151334066 151334276 + 17.6 0.000 Intergenic Intergenic -23421 NM_007115 7130 Hs.437322 NM_007115 ENSG00000123610 TNFAIP6 TSG-6|TSG6 TNF alpha induced protein 6 protein-coding chr12-895 chr12 107214363 107214573 + 17.6 0.000 Intergenic HERV9-int|LTR|ERV1 -103966 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr8-698 chr8 23388704 23388914 + 17.6 0.000 intron (NM_002318, intron 1 of 13) MamGypsy2-I|LTR|Gypsy 15311 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr1-5328 chr1 226821352 226821562 + 17.6 0.000 Intergenic Intergenic -49115 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr7-1542 chr7 727991 728201 + 17.6 0.000 promoter-TSS (NM_001164759) promoter-TSS (NM_001164759) -420 NM_001164758 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr19-943 chr19 47227988 47228198 + 17.6 0.000 intron (NM_001127241, intron 1 of 2) intron (NM_001127241, intron 1 of 2) -1074 NR_036159 100422832 NR_036159 ENSG00000284411 MIR3191 mir-3191 microRNA 3191 ncRNA chr6-236 chr6 44127278 44127488 + 17.6 0.000 promoter-TSS (NM_032111) promoter-TSS (NM_032111) 69 NM_032111 64928 Hs.311190 NM_032111 ENSG00000180992 MRPL14 L14mt|L32mt|MRP-L14|MRP-L32|MRPL32|RMPL32|RPML32 mitochondrial ribosomal protein L14 protein-coding chr3-1317 chr3 27483257 27483467 + 17.6 0.000 intron (NR_135542, intron 1 of 23) intron (NR_135542, intron 1 of 23) 1022 NM_001321107 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr2-1550 chr2 221166399 221166609 + 17.6 0.000 Intergenic Intergenic 405800 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr11-2871 chr11 27296506 27296716 + 17.6 0.000 Intergenic Intergenic 66604 NM_030771 91057 Hs.143733 NM_030771 ENSG00000109881 CCDC34 L15|NY-REN-41|RAMA3 coiled-coil domain containing 34 protein-coding chr18-280 chr18 21053205 21053415 + 17.6 0.000 intron (NM_005406, intron 2 of 32) Cheshire|DNA|hAT-Charlie 58503 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr15-1008 chr15 75461947 75462157 + 17.6 0.000 Intergenic AluYc|SINE|Alu -6237 NM_001145357 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding chr7-918 chr7 151252037 151252247 + 17.6 0.000 intron (NM_003078, intron 2 of 13) CpG -3448 NM_001003801 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr1-1838 chr1 5975270 5975480 + 17.6 0.000 intron (NM_001291594, intron 1 of 25) intron (NM_001291594, intron 1 of 25) 17050 NM_001291593 261734 Hs.462348 NM_015102 ENSG00000131697 NPHP4 POC10|SLSN4 nephrocystin 4 protein-coding chr18-316 chr18 74604837 74605047 + 17.6 0.000 Intergenic LTR87|LTR|ERVL? -7107 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr22-779 chr22 41666682 41666892 + 17.6 0.000 Intergenic CpG 22080 NM_005008 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chr3-1475 chr3 70832731 70832941 + 17.6 0.000 Intergenic Intergenic 232088 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr2-1328 chr2 69767210 69767420 + 17.6 0.000 intron (NM_001365496, intron 2 of 13) intron (NM_001365496, intron 2 of 13) 25181 NM_001365496 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr3-1258 chr3 174767843 174768053 + 17.6 0.000 Intergenic Intergenic -91386 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr10-2109 chr10 125824832 125825042 + 17.6 0.000 intron (NM_078468, intron 1 of 6) intron (NM_078468, intron 1 of 6) 1391 NM_078469 56647 Hs.370292 NM_016567 ENSG00000107949 BCCIP TOK-1|TOK1 BRCA2 and CDKN1A interacting protein protein-coding chr3-952 chr3 12557803 12558013 + 17.6 0.000 intron (NM_001271707, intron 1 of 6) intron (NM_001271707, intron 1 of 6) 821 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr5-893 chr5 150263903 150264113 + 17.6 0.000 intron (NM_001369025, intron 3 of 17) intron (NM_001369025, intron 3 of 17) 25765 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chr15-384 chr15 73924453 73924663 + 17.6 0.000 intron (NR_040068, intron 1 of 2) intron (NR_040068, intron 1 of 2) -1904 NM_005576 4016 Hs.65436 NM_005576 ENSG00000129038 LOXL1 LOL|LOXL lysyl oxidase like 1 protein-coding chr20-466 chr20 35512051 35512261 + 17.6 0.000 TTS (NM_001318219) TTS (NM_001318219) 17496 NR_026933 140873 Hs.158680 NM_080828 ENSG00000125975 C20orf173 dJ477O4.4 chromosome 20 open reading frame 173 protein-coding chr4-882 chr4 176794189 176794399 + 17.6 0.000 Intergenic L3|LINE|CR1 -1372 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr3-1843 chr3 76500919 76501129 + 17.6 0.000 Intergenic Intergenic -539075 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr4-1030 chr4 20464404 20464614 + 17.6 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) -63766 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr19-1130 chr19 3227420 3227630 + 17.6 0.000 intron (NR_033342, intron 1 of 12) intron (NR_033342, intron 1 of 12) 2247 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr12-937 chr12 12009165 12009375 + 17.6 0.000 Intergenic Intergenic -40591 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr10-1508 chr10 22624375 22624585 + 17.6 0.000 intron (NM_005028, intron 1 of 9) Charlie7|DNA|hAT-Charlie 89628 NM_001330062 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr17-1123 chr17 39972378 39972588 + 17.6 0.000 intron (NM_178171, intron 6 of 11) intron (NM_178171, intron 6 of 11) -8324 NM_002809 5709 Hs.12970 NM_002809 ENSG00000108344 PSMD3 P58|RPN3|S3|TSTA2 proteasome 26S subunit, non-ATPase 3 protein-coding chr17-670 chr17 17682897 17683107 + 17.6 0.000 intron (NM_030665, intron 1 of 5) CpG 1544 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr1-1864 chr1 75786161 75786371 + 17.6 0.000 promoter-TSS (NR_073562) promoter-TSS (NR_073562) 10 NM_004582 5876 Hs.78948 NM_004582 ENSG00000137955 RABGGTB GGTB Rab geranylgeranyltransferase subunit beta protein-coding chr18-444 chr18 21223507 21223717 + 17.6 0.000 Intergenic MER44D|DNA|TcMar-Tigger -18630 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr1-1645 chr1 207959240 207959450 + 17.6 0.000 Intergenic CpG -48220 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr19-1305 chr19 8569218 8569428 + 17.6 0.000 intron (NM_012335, intron 1 of 27) intron (NM_012335, intron 1 of 27) 8119 NM_012335 4542 Hs.465818 NM_012335 ENSG00000142347 MYO1F - myosin IF protein-coding chr16-1184 chr16 331610 331820 + 17.6 0.000 intron (NM_003502, intron 2 of 10) intron (NM_003502, intron 2 of 10) 21008 NR_134879 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr13-603 chr13 98910694 98910904 + 17.6 0.000 intron (NM_001366682, intron 9 of 53) intron (NM_001366682, intron 9 of 53) 67265 NM_001366679 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr20-523 chr20 31560695 31560905 + 17.6 0.000 intron (NM_178580, intron 9 of 12) intron (NM_178580, intron 9 of 12) 12463 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr22-772 chr22 39343602 39343812 + 17.6 0.000 Intergenic Intergenic -6242 NM_145731 9145 Hs.216226 NM_004711 ENSG00000100321 SYNGR1 - synaptogyrin 1 protein-coding chr3-1636 chr3 94405725 94405935 + 17.6 0.000 Intergenic Intergenic 342769 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr11-625 chr11 72239623 72239833 + 17.6 0.000 TTS (NM_001567) TTS (NM_001567) 4448 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr1-1856 chr1 41876750 41876960 + 17.6 0.000 intron (NR_038261, intron 2 of 3) intron (NR_038261, intron 2 of 3) 42067 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr12-793 chr12 92784391 92784601 + 17.6 0.000 intron (NM_003566, intron 22 of 28) intron (NM_003566, intron 22 of 28) 48007 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 - pleckstrin homology and RhoGEF domain containing G7 protein-coding chr8-807 chr8 127038673 127038883 + 17.6 0.000 Intergenic L2b|LINE|L2 25624 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr7-722 chr7 149285241 149285451 + 17.6 0.000 promoter-TSS (NR_036573) promoter-TSS (NR_036573) 65 NR_036573 155060 Hs.490512 NR_015357 ENSG00000244560 LOC155060 - AI894139 pseudogene pseudo chr3-900 chr3 107431724 107431934 + 17.6 0.000 intron (NR_110039, intron 1 of 2) CpG 899 NR_110039 101929607 Hs.252565 NR_110039 ENSG00000273125 LINC01990 - long intergenic non-protein coding RNA 1990 ncRNA chr2-2116 chr2 30362623 30362833 + 17.6 0.000 Intergenic Intergenic 16082 NR_122048 285043 Hs.429119 NR_122048 LINC01936 - long intergenic non-protein coding RNA 1936 ncRNA chr19-1397 chr19 19034318 19034528 + 17.6 0.000 promoter-TSS (NM_001352071) promoter-TSS (NM_001352071) -579 NM_001321697 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr10-931 chr10 130127870 130128080 + 17.6 0.000 Intergenic Intergenic -8400 NM_001199868 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr14-755 chr14 75267047 75267257 + 17.6 0.000 Intergenic Intergenic -11676 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr13-270 chr13 44918254 44918464 + 17.6 0.000 Intergenic Intergenic 71112 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 nuclear FMR1 interacting protein 1 protein-coding chr16-1190 chr16 3542681 3542891 + 17.6 0.000 intron (NR_075083, intron 18 of 20) intron (NR_075083, intron 18 of 20) 32892 NM_024793 23059 Hs.155995 NM_015041 ENSG00000103351 CLUAP1 CFAP22|FAP22|IFT38 clusterin associated protein 1 protein-coding chr17-1711 chr17 49550149 49550359 + 17.6 0.000 intron (NR_103773, intron 1 of 2) intron (NR_103773, intron 1 of 2) 23810 NR_103773 100288866 Hs.720309 NR_103773 ENSG00000249906 LOC100288866 - uncharacterized LOC100288866 ncRNA chr20-588 chr20 23116361 23116571 + 17.6 0.000 Intergenic Intergenic 16170 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr5-1070 chr5 174571866 174572076 + 17.6 0.000 Intergenic Intergenic -152611 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr19-965 chr19 44911170 44911380 + 17.6 0.000 Intergenic Intergenic -3050 NM_001321065 341 Hs.110675 NM_001645 ENSG00000130208 APOC1 Apo-CI|ApoC-I|apo-CIB|apoC-IB apolipoprotein C1 protein-coding chr2-2194 chr2 44578598 44578808 + 17.6 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 216756 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr5-427 chr5 134527394 134527604 + 17.6 0.000 intron (NM_015288, intron 1 of 10) CpG-22436 1391 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr7-2296 chr7 74062136 74062346 + 17.6 0.000 intron (NM_001278915, intron 26 of 32) intron (NM_001278915, intron 26 of 32) -21563 NM_002314 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr1-2708 chr1 225691846 225692056 + 17.6 0.000 Intergenic Intergenic -38828 NM_001008493 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr1-1881 chr1 150255645 150255855 + 17.6 0.000 Intergenic Intergenic -2024 NM_012113 23632 Hs.528988 NM_012113 ENSG00000118298 CA14 CAXiV carbonic anhydrase 14 protein-coding chr1-2351 chr1 26321496 26321706 + 17.6 0.000 TTS (NM_001039775) TTS (NM_001039775) -3336 NM_145345 91544 Hs.145061 NM_145345 ENSG00000158062 UBXN11 COA-1|PP2243|SOC|SOCI|UBXD5 UBX domain protein 11 protein-coding chr8-702 chr8 73281724 73281934 + 17.6 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 11804 NM_000971 6129 Hs.421257 NM_000971 ENSG00000147604 RPL7 L7|humL7-1 ribosomal protein L7 protein-coding chr3-1136 chr3 30770452 30770662 + 17.6 0.000 intron (NM_207359, intron 14 of 14) intron (NM_207359, intron 14 of 14) 124104 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr4-933 chr4 39114606 39114816 + 17.6 0.000 intron (NM_199039, intron 8 of 9) intron (NM_199039, intron 8 of 9) 52479 NM_199039 51088 Hs.272251 NM_015990 ENSG00000109790 KLHL5 - kelch like family member 5 protein-coding chr10-879 chr10 72096170 72096380 + 17.6 0.000 non-coding (NR_045564, exon 10 of 10) non-coding (NR_045564, exon 10 of 10) -7243 NM_001134434 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr5-910 chr5 72264811 72265021 + 17.6 0.000 intron (NM_001286748, intron 4 of 11) intron (NM_001286748, intron 4 of 11) 55324 NM_001286748 23107 Hs.482491 NM_015084 ENSG00000113048 MRPS27 MRP-S27|S27mt mitochondrial ribosomal protein S27 protein-coding chr19-933 chr19 16197062 16197272 + 17.6 0.000 promoter-TSS (NM_001130524) promoter-TSS (NM_001130524) -744 NM_001130524 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr21-151 chr21 45439267 45439477 + 17.6 0.000 intron (NM_130445, intron 2 of 42) CpG -14302 NR_027498 378832 Hs.517353 NM_199175 ENSG00000183535 COL18A1-AS1 C21orf123|NCRNA00175|PRED80 COL18A1 antisense RNA 1 ncRNA chr5-651 chr5 172740869 172741079 + 17.6 0.000 Intergenic Intergenic -14529 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr22-414 chr22 28142291 28142501 + 17.6 0.000 intron (NM_001145418, intron 6 of 22) intron (NM_001145418, intron 6 of 22) -221784 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr18-192 chr18 12282503 12282713 + 17.6 0.000 Intergenic MER21C|LTR|ERVL -25061 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr21-185 chr21 38277629 38277839 + 17.6 0.000 intron (NM_170737, intron 1 of 2) X7A_LINE|LINE|CR1 5314 NM_170737 3772 Hs.411299 NM_002243 ENSG00000157551 KCNJ15 IRKK|KIR1.3|KIR4.2 potassium voltage-gated channel subfamily J member 15 protein-coding chr14-589 chr14 61751116 61751326 + 17.6 0.000 promoter-TSS (NR_144368) promoter-TSS (NR_144368) -124 NR_144368 105370526 Hs.661638 NR_144368 ENSG00000258667 HIF1A-AS3 - HIF1A antisense RNA 3 ncRNA chr1-2029 chr1 162162098 162162308 + 17.6 0.000 intron (NM_014697, intron 2 of 9) Charlie29a|DNA|hAT-Charlie 5096 NR_039798 100616386 NR_039798 ENSG00000266144 MIR4654 mir-4654 microRNA 4654 ncRNA chr12-1200 chr12 112109187 112109397 + 17.6 0.000 promoter-TSS (NM_024953) promoter-TSS (NM_024953) -509 NM_024953 80018 Hs.530941 NM_024953 ENSG00000111300 NAA25 C12orf30|MDM20|NAP1 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding chr6-359 chr6 107028280 107028490 + 17.6 0.000 5' UTR (NM_001142470, exon 1 of 5) 5' UTR (NM_001142470, exon 1 of 5) 186 NM_001142470 51250 Hs.486084 NM_016487 ENSG00000130349 C6orf203 HSPC230|PRED31 chromosome 6 open reading frame 203 protein-coding chr15-833 chr15 40104737 40104947 + 17.6 0.000 intron (NM_001003940, intron 3 of 4) intron (NM_001003940, intron 3 of 4) 1244 NM_001003942 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr12-936 chr12 10641765 10641975 + 17.6 0.000 intron (NM_018423, intron 1 of 10) intron (NM_018423, intron 1 of 10) -28261 NM_018048 55110 Hs.104650 NM_018048 ENSG00000111196 MAGOHB MGN2|mago|magoh mago homolog B, exon junction complex subunit protein-coding chr7-1859 chr7 5694368 5694578 + 17.6 0.000 intron (NM_207111, intron 13 of 16) intron (NM_207111, intron 13 of 16) -14012 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr1-1900 chr1 197146738 197146948 + 17.6 0.000 promoter-TSS (NM_018136) promoter-TSS (NM_018136) -149 NM_001206846 259266 Hs.121028 NM_018136 ENSG00000066279 ASPM ASP|Calmbp1|MCPH5 abnormal spindle microtubule assembly protein-coding chr4-799 chr4 39348979 39349189 + 17.6 0.000 intron (NM_001204747, intron 2 of 24) MLT1A-int|LTR|ERVL-MaLR 17278 NM_001204747 5981 Hs.507475 NM_002913 ENSG00000035928 RFC1 A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C subunit 1 protein-coding chr16-621 chr16 10580578 10580788 + 17.6 0.000 promoter-TSS (NM_001424) promoter-TSS (NM_001424) -85 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr3-1437 chr3 16513637 16513847 + 17.6 0.000 promoter-TSS (NM_015150) promoter-TSS (NM_015150) -43 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr1-1562 chr1 8422705 8422915 + 17.6 0.000 intron (NM_001042681, intron 11 of 22) intron (NM_001042681, intron 11 of 22) 1022 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr3-1418 chr3 177977342 177977552 + 17.6 0.000 Intergenic Intergenic 160582 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr3-1496 chr3 120567519 120567729 + 17.6 0.000 Intergenic Intergenic -28712 NM_001168331 4710 Hs.304613 NM_004547 ENSG00000065518 NDUFB4 B15|CI-B15 NADH:ubiquinone oxidoreductase subunit B4 protein-coding chr2-734 chr2 109238593 109238803 + 17.6 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 74927 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr10-1201 chr10 125053329 125053539 + 17.6 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -20564 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr9-1239 chr9 136032018 136032228 + 17.4 0.000 intron (NM_144653, intron 2 of 5) intron (NM_144653, intron 2 of 5) 63166 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr14-412 chr14 34539632 34539842 + 17.4 0.000 promoter-TSS (NM_001318916) promoter-TSS (NM_001318916) 0 NM_001318916 55837 Hs.433269 NM_018453 ENSG00000129518 EAPP BM036|C14orf11 E2F associated phosphoprotein protein-coding chr20-211 chr20 32457511 32457721 + 17.4 0.000 intron (NM_001351680, intron 2 of 8) intron (NM_001351680, intron 2 of 8) 25874 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr7-651 chr7 92134556 92134766 + 17.4 0.000 promoter-TSS (NM_001146152) promoter-TSS (NM_001146152) 84 NM_001146152 1595 Hs.417077 NM_000786 ENSG00000001630 CYP51A1 CP51|CYP51|CYPL1|LDM|P450-14DM|P450L1 cytochrome P450 family 51 subfamily A member 1 protein-coding chr1-2195 chr1 56096332 56096542 + 17.4 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 151350 NR_147161 105378738 Hs.121473 NR_147161 ENSG00000233079 LINC01755 - long intergenic non-protein coding RNA 1755 ncRNA chr8-996 chr8 130335438 130335648 + 17.4 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -39010 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr2-2370 chr2 235586437 235586647 + 17.4 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -68621 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr1-3907 chr1 68709977 68710187 + 17.4 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -213000 NM_017779 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding chr1-1665 chr1 23198307 23198517 + 17.4 0.000 Intergenic L1ME3E|LINE|L1 -3683 NM_000864 3352 Hs.121482 NM_000864 ENSG00000179546 HTR1D 5-HT1D|HT1DA|HTR1DA|HTRL|RDC4 5-hydroxytryptamine receptor 1D protein-coding chr5-1485 chr5 107359651 107359861 + 17.4 0.000 Intergenic Intergenic 311181 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr22-574 chr22 46934874 46935084 + 17.4 0.000 intron (NR_104292, intron 10 of 13) intron (NR_104292, intron 10 of 13) -18937 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr4-859 chr4 80407276 80407486 + 17.4 0.000 intron (NM_152770, intron 2 of 5) MLT1H|LTR|ERVL-MaLR 71661 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr10-526 chr10 15088636 15088846 + 17.4 0.000 promoter-TSS (NR_144471) promoter-TSS (NR_144471) 35 NM_001039844 414149 NM_001039844 ENSG00000176244 ACBD7 bA455B2.2 acyl-CoA binding domain containing 7 protein-coding chr5-1208 chr5 110916472 110916682 + 17.4 0.000 Intergenic Intergenic -153503 NR_045089 85480 Hs.389874 NM_033035 ENSG00000145777 TSLP - thymic stromal lymphopoietin protein-coding chr17-802 chr17 77125515 77125725 + 17.4 0.000 intron (NM_001204410, intron 2 of 17) intron (NM_001204410, intron 2 of 17) -15349 NM_003003 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr22-654 chr22 37613773 37613983 + 17.4 0.000 intron (NM_001172688, intron 2 of 17) intron (NM_001172688, intron 2 of 17) 4838 NM_001172688 26088 Hs.499158 NM_013365 ENSG00000100083 GGA1 - golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding chr8-962 chr8 95485268 95485478 + 17.4 0.000 intron (NR_038207, intron 2 of 2) intron (NR_038207, intron 2 of 2) -216172 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr5-1887 chr5 150313868 150314078 + 17.4 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -11068 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr14-774 chr14 36690758 36690968 + 17.4 0.000 intron (NM_001171170, intron 7 of 10) intron (NM_001171170, intron 7 of 10) 33295 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr12-1932 chr12 103805027 103805237 + 17.4 0.000 intron (NM_001031701, intron 4 of 13) HAL1|LINE|L1 36102 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr8-548 chr8 22392592 22392802 + 17.4 0.000 promoter-TSS (NM_001351659) promoter-TSS (NM_001351659) -139 NM_001351660 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr6-1018 chr6 83859618 83859828 + 17.4 0.000 promoter-TSS (NM_016230) promoter-TSS (NM_016230) 34 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding chr3-1376 chr3 50243203 50243413 + 17.4 0.000 intron (NM_001282618, intron 1 of 7) intron (NM_001282618, intron 1 of 7) -3602 NM_001166425 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr12-1000 chr12 124568741 124568951 + 17.4 0.000 Intergenic Intergenic -1234 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr16-1147 chr16 363407 363617 + 17.4 0.000 Intergenic Intergenic 7026 NM_006428 10573 Hs.513230 NM_006428 ENSG00000086504 MRPL28 MAAT1|p15 mitochondrial ribosomal protein L28 protein-coding chr3-2159 chr3 139758947 139759157 + 17.4 0.000 Intergenic Intergenic -81002 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr20-393 chr20 25057472 25057682 + 17.4 0.000 intron (NM_032501, intron 1 of 13) CpG 562 NM_032501 84532 Hs.529353 NM_032501 ENSG00000154930 ACSS1 ACAS2L|ACECS1|AceCS2L acyl-CoA synthetase short chain family member 1 protein-coding chr16-979 chr16 83956778 83956988 + 17.4 0.000 intron (NM_182981, intron 1 of 5) intron (NM_182981, intron 1 of 5) 3643 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr4-888 chr4 187547192 187547402 + 17.4 0.000 intron (NR_110436, intron 2 of 2) intron (NR_110436, intron 2 of 2) -41684 NR_038931 339975 Hs.639361 NR_038931 LOC339975 - uncharacterized LOC339975 ncRNA chr8-309 chr8 102197445 102197655 + 17.4 0.000 Intergenic Intergenic 41281 NM_001172477 50484 Hs.512592 NM_015713 ENSG00000048392 RRM2B MTDPS8A|MTDPS8B|P53R2 ribonucleotide reductase regulatory TP53 inducible subunit M2B protein-coding chr1-1191 chr1 41241877 41242087 + 17.4 0.000 intron (NM_001172218, intron 1 of 15) CpG 324 NM_012236 22955 Hs.571874 NM_012236 ENSG00000010803 SCMH1 Scml3 Scm polycomb group protein homolog 1 protein-coding chr7-1217 chr7 92642268 92642478 + 17.4 0.000 intron (NM_001259, intron 5 of 7) intron (NM_001259, intron 5 of 7) -51983 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr17-952 chr17 42653642 42653852 + 17.4 0.000 Intergenic CpG -5537 NM_001320509 27175 Hs.279669 NM_016437 ENSG00000037042 TUBG2 - tubulin gamma 2 protein-coding chr22-504 chr22 41526921 41527131 + 17.4 0.000 3' UTR (NM_001018052, exon 5 of 5) 3' UTR (NM_001018052, exon 5 of 5) 17444 NM_001018050 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding chr3-1234 chr3 124132926 124133136 + 17.4 0.000 TTS (NR_049798) TTS (NR_049798) 102 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr19-1014 chr19 19032366 19032576 + 17.4 0.000 intron (NR_147915, intron 1 of 11) intron (NR_147915, intron 1 of 11) 1046 NR_147913 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr1-1458 chr1 17561706 17561916 + 17.4 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) -18742 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr3-1330 chr3 72177620 72177830 + 17.4 0.000 Intergenic Intergenic 26468 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr8-843 chr8 133455709 133455919 + 17.4 0.000 3' UTR (NM_173344, exon 10 of 10) 3' UTR (NM_173344, exon 10 of 10) 116073 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr7-1360 chr7 76421159 76421369 + 17.4 0.000 intron (NM_007155, intron 1 of 8) AluJo|SINE|Alu -3686 NM_001110354 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr17-1645 chr17 39517277 39517487 + 17.4 0.000 intron (NM_015083, intron 9 of 13) intron (NM_015083, intron 9 of 13) 55896 NM_015083 51755 Hs.345028 NM_015083 ENSG00000167258 CDK12 CRK7|CRKR|CRKRS cyclin dependent kinase 12 protein-coding chr1-3676 chr1 156689063 156689273 + 17.4 0.000 Intergenic L3b|LINE|CR1 -11761 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr6-1086 chr6 56594000 56594210 + 17.4 0.000 exon (NM_015548, exon 29 of 84) exon (NM_015548, exon 29 of 84) 48784 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6-705 chr6 44133633 44133843 + 17.4 0.000 intron (NM_018426, intron 1 of 23) intron (NM_018426, intron 1 of 23) 6184 NM_018426 55362 Hs.414473 NM_018426 ENSG00000137216 TMEM63B C6orf110 transmembrane protein 63B protein-coding chr7-939 chr7 47556541 47556751 + 17.4 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 25465 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr3-733 chr3 75785393 75785603 + 17.4 0.000 promoter-TSS (NM_001290209) promoter-TSS (NM_001290209) 51 NM_001290210 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr5-960 chr5 142548894 142549104 + 17.4 0.000 Intergenic Intergenic 72335 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr2-1029 chr2 31384785 31384995 + 17.4 0.000 intron (NM_000379, intron 9 of 35) intron (NM_000379, intron 9 of 35) 29852 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr1-1913 chr1 221093915 221094125 + 17.4 0.000 Intergenic Intergenic -213880 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr9-1677 chr9 78713963 78714173 + 17.4 0.000 Intergenic Intergenic 416943 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr8-645 chr8 94436904 94437114 + 17.4 0.000 promoter-TSS (NM_001256141) promoter-TSS (NM_001256141) -65 NM_001205263 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr10-1300 chr10 52486865 52487075 + 17.4 0.000 Intergenic Intergenic -16437 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LNCAROD A-ROD|LINC01468|lnc-MBL2-4 lncRNA activating regulator of DKK1 ncRNA chr1-1505 chr1 19452471 19452681 + 17.4 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 31719 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr5-1796 chr5 56058449 56058659 + 17.4 0.000 Intergenic Intergenic 63387 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA chr10-2581 chr10 71836664 71836874 + 17.4 0.000 intron (NM_001042465, intron 1 of 14) intron (NM_001042465, intron 1 of 14) 14482 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr4-1639 chr4 90317682 90317892 + 17.4 0.000 intron (NM_207491, intron 3 of 7) MLT1I|LTR|ERVL-MaLR 82756 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr9-1268 chr9 133862870 133863080 + 17.4 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) -123020 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr3-919 chr3 42262561 42262771 + 17.4 0.000 intron (NM_000729, intron 4 of 4) intron (NM_000729, intron 4 of 4) 1281 NM_001174138 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr17-1547 chr17 82912690 82912900 + 17.4 0.000 intron (NM_005993, intron 23 of 38) intron (NM_005993, intron 23 of 38) -72773 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr6-1149 chr6 166619943 166620153 + 17.4 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 7203 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr5-1230 chr5 149962140 149962350 + 17.4 0.000 intron (NM_000112, intron 1 of 2) intron (NM_000112, intron 1 of 2) 1508 NM_000112 1836 Hs.302738 NM_000112 ENSG00000155850 SLC26A2 D5S1708|DTD|DTDST|EDM4|MST153|MSTP157 solute carrier family 26 member 2 protein-coding chr18-584 chr18 12722888 12723098 + 17.4 0.000 intron (NM_147163, intron 5 of 6) intron (NM_147163, intron 5 of 6) 19951 NM_020232 56984 Hs.464652 NM_020232 ENSG00000128789 PSMG2 CLAST3|HCCA3|HsT1707|MDS003|PAC2|TNFSF5IP1 proteasome assembly chaperone 2 protein-coding chr3-1214 chr3 57952299 57952509 + 17.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -56018 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr2-829 chr2 85561494 85561704 + 17.4 0.000 promoter-TSS (NM_000821) promoter-TSS (NM_000821) -106 NM_000821 2677 Hs.77719 NM_000821 ENSG00000115486 GGCX VKCFD1 gamma-glutamyl carboxylase protein-coding chr4-1290 chr4 87079454 87079664 + 17.4 0.000 intron (NM_005935, intron 3 of 19) intron (NM_005935, intron 3 of 19) 72558 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr17-1923 chr17 76816473 76816683 + 17.4 0.000 Intergenic Intergenic 17534 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr17-1566 chr17 28467637 28467847 + 17.4 0.000 Intergenic L1M3|LINE|L1 -5902 NM_001145975 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr11-1328 chr11 120331780 120331990 + 17.4 0.000 3' UTR (NM_001198670, exon 3 of 3) 3' UTR (NM_001198670, exon 3 of 3) -4528 NM_015313 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr16-1116 chr16 1493059 1493269 + 17.4 0.000 promoter-TSS (NM_016111) promoter-TSS (NM_016111) -196 NM_016111 9894 Hs.271044 NM_016111 ENSG00000100726 TELO2 CLK2|TEL2|YHFS telomere maintenance 2 protein-coding chr17-1640 chr17 29761030 29761240 + 17.4 0.000 intron (NM_033389, intron 2 of 14) CpG 297 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr1-3150 chr1 67000567 67000777 + 17.4 0.000 3' UTR (NM_015139, exon 12 of 12) 3' UTR (NM_015139, exon 12 of 12) 53476 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chrX-837 chrX 114615894 114616104 + 17.4 0.000 intron (NM_001256761, intron 2 of 5) intron (NM_001256761, intron 2 of 5) -14798 NR_002993 677816 Hs.693123 NR_002993 ENSG00000208839 SNORA35 HBI-36|SNORA35A small nucleolar RNA, H/ACA box 35 snoRNA chr17-1019 chr17 39139295 39139505 + 17.4 0.000 intron (NM_020405, intron 2 of 13) intron (NM_020405, intron 2 of 13) 12237 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr2-1140 chr2 68251241 68251451 + 17.4 0.000 intron (NM_000945, intron 1 of 5) intron (NM_000945, intron 1 of 5) 1186 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr9-1279 chr9 5879664 5879874 + 17.4 0.000 Intergenic Intergenic -11120 NM_005511 2315 Hs.154069 NM_005511 ENSG00000120215 MLANA MART-1|MART1 melan-A protein-coding chr17-1511 chr17 46989621 46989831 + 17.4 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -10473 NM_203400 388394 Hs.367999 NM_203400 ENSG00000179673 RPRML - reprimo like protein-coding chr2-1124 chr2 241561045 241561255 + 17.4 0.000 intron (NM_032515, intron 2 of 4) X6B_LINE|LINE|CR1 -2007 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr5-1024 chr5 134554489 134554699 + 17.4 0.000 intron (NM_015288, intron 4 of 10) intron (NM_015288, intron 4 of 10) 28486 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr15-591 chr15 78048048 78048258 + 17.4 0.000 intron (NM_144572, intron 2 of 12) intron (NM_144572, intron 2 of 12) 29499 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr11-649 chr11 85647881 85648091 + 17.4 0.000 promoter-TSS (NM_032273) promoter-TSS (NM_032273) 19 NM_032273 84233 Hs.533725 NM_032273 ENSG00000171202 TMEM126A OPA7 transmembrane protein 126A protein-coding chr20-401 chr20 56804574 56804784 + 17.4 0.000 Intergenic Intergenic 175373 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr8-1258 chr8 136714303 136714513 + 17.4 0.000 intron (NR_147196, intron 2 of 5) MIRb|SINE|MIR 183610 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr5-1449 chr5 36878768 36878978 + 17.4 0.000 intron (NM_015384, intron 1 of 45) intron (NM_015384, intron 1 of 45) 2104 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr4-770 chr4 81632010 81632220 + 17.4 0.000 Intergenic Intergenic -160208 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr12-1525 chr12 76422485 76422695 + 17.4 0.000 exon (NM_001319655, exon 1 of 21) exon (NM_001319655, exon 1 of 21) 695 NM_001319655 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr21-55 chr21 44983859 44984069 + 17.4 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 10122 NR_033840 727699 Hs.397403 NR_033840 ENSG00000234880 LINC00163 C21orf134|NCRNA00163|NLC1-A|NLC1A long intergenic non-protein coding RNA 163 ncRNA chr8-1711 chr8 123924748 123924958 + 17.4 0.000 intron (NM_001039112, intron 1 of 40) intron (NM_001039112, intron 1 of 40) 72866 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chr12-1225 chr12 7995363 7995573 + 17.4 0.000 Intergenic Intergenic -37248 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr6-1094 chr6 77610595 77610805 + 17.4 0.000 Intergenic MER20B|DNA|hAT-Charlie -39574 NM_001282136 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chrX-255 chrX 154534738 154534948 + 17.4 0.000 intron (NM_000402, intron 5 of 12) intron (NM_000402, intron 5 of 12) -7369 NM_001099856 8517 Hs.43505 NM_003639 ENSG00000269335 IKBKG AMCBX1|EDAID1|FIP-3|FIP3|Fip3p|IKK-gamma|IKKAP1|IKKG|IMD33|IP|IP1|IP2|IPD2|NEMO|ZC2HC9 inhibitor of nuclear factor kappa B kinase regulatory subunit gamma protein-coding chr3-598 chr3 158571067 158571277 + 17.4 0.000 promoter-TSS (NM_001130157) promoter-TSS (NM_001130157) -22 NM_001369782 4291 Hs.85195 NM_022443 ENSG00000178053 MLF1 - myeloid leukemia factor 1 protein-coding chr10-1272 chr10 4247046 4247256 + 17.4 0.000 Intergenic Intergenic -3239 NR_108040 100652988 Hs.433011 NR_108040 LINC00702 - long intergenic non-protein coding RNA 702 ncRNA chr6-903 chr6 134589558 134589768 + 17.4 0.000 Intergenic Intergenic -49658 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr8-775 chr8 38853242 38853452 + 17.4 0.000 TTS (NM_001352793) TTS (NM_001352793) 47897 NM_001352791 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr1-2447 chr1 31784885 31785095 + 17.4 0.000 Intergenic Intergenic -20650 NM_001294335 576 Hs.524138 NM_001294335 ENSG00000121753 ADGRB2 BAI2 adhesion G protein-coupled receptor B2 protein-coding chr8-990 chr8 125637481 125637691 + 17.4 0.000 Intergenic Intergenic 205377 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr12-819 chr12 8146264 8146474 + 17.4 0.000 Intergenic L1PA10|LINE|L1 -11517 NR_036440 642559 Hs.646545 NR_036440 ENSG00000235602 POU5F1P3 OCT3|OCT4|OCT4-pg3|OTF-3|OTF3|OTF3L|Oct-3|Oct-4|POU5F1|POU5F1L|POU5FLC12 POU class 5 homeobox 1 pseudogene 3 pseudo chr5-982 chr5 14229242 14229452 + 17.4 0.000 intron (NM_007118, intron 1 of 56) MER58A|DNA|hAT-Charlie 86005 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr5-733 chr5 154221558 154221768 + 17.4 0.000 intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 30930 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr17-1153 chr17 2892646 2892856 + 17.4 0.000 intron (NM_001330058, intron 2 of 24) MLT1G|LTR|ERVL-MaLR 73144 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr7-1025 chr7 36526994 36527204 + 17.4 0.000 intron (NM_001177507, intron 18 of 19) intron (NM_001177507, intron 18 of 19) 73021 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr2-825 chr2 69387055 69387265 + 17.4 0.000 promoter-TSS (NM_001244710) promoter-TSS (NM_001244710) 67 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr8-423 chr8 38166706 38166916 + 17.4 0.000 intron (NR_045492, intron 2 of 2) intron (NR_045492, intron 2 of 2) 9682 NM_014462 27257 Hs.425311 NM_014462 ENSG00000175324 LSM1 CASM|YJL124C LSM1 homolog, mRNA degradation associated protein-coding chr7-1249 chr7 13850272 13850482 + 17.4 0.000 Intergenic Intergenic 136137 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr7-1734 chr7 23918924 23919134 + 17.4 0.000 Intergenic Intergenic 208810 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr11-1258 chr11 119481377 119481587 + 17.4 0.000 intron (NR_034160, intron 3 of 3) intron (NR_034160, intron 3 of 3) -56497 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr12-728 chr12 65631606 65631816 + 17.4 0.000 intron (NR_120432, intron 1 of 4) intron (NR_120432, intron 1 of 4) 10661 NR_120431 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr7-501 chr7 56093088 56093298 + 17.4 0.000 promoter-TSS (NM_006213) promoter-TSS (NM_006213) -197 NR_047689 5260 Hs.730821 NM_006213 ENSG00000164776 PHKG1 PHKG phosphorylase kinase catalytic subunit gamma 1 protein-coding chr1-3014 chr1 230849643 230849853 + 17.4 0.000 intron (NM_001136494, intron 4 of 5) intron (NM_001136494, intron 4 of 5) 6259 NM_001136495 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr10-2652 chr10 92760608 92760818 + 17.4 0.000 Intergenic Intergenic -66118 NM_001013848 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr11-1471 chr11 110196172 110196382 + 17.4 0.000 intron (NM_001260496, intron 7 of 7) intron (NM_001260496, intron 7 of 7) 100435 NM_001260495 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr16-1198 chr16 30076304 30076514 + 17.4 0.000 exon (NM_001303504, exon 2 of 8) exon (NM_001303504, exon 2 of 8) 415 NM_002720 5531 Hs.534338 NM_002720 ENSG00000149923 PPP4C PP-X|PP4|PP4C|PPH3|PPP4|PPX protein phosphatase 4 catalytic subunit protein-coding chrX-240 chrX 149630665 149630875 + 17.4 0.000 intron (NM_032508, intron 1 of 6) L2c|LINE|L2 1022 NM_032508 84548 Hs.522172 NM_032508 ENSG00000269556 TMEM185A CXorf13|FAM11A|FRAXF|ee3 transmembrane protein 185A protein-coding chr6-688 chr6 15608480 15608690 + 17.4 0.000 intron (NR_036448, intron 7 of 9) HAL1|LINE|L1 54443 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr17-1868 chr17 39085312 39085522 + 17.4 0.000 intron (NM_020405, intron 8 of 13) L2a|LINE|L2 28398 NR_036551 100131347 Hs.676510 NR_036551 ENSG00000263818 RDM1P5 - RDM1 pseudogene 5 pseudo chr5-1202 chr5 87169648 87169858 + 17.4 0.000 intron (NR_105018, intron 2 of 3) intron (NR_105018, intron 2 of 3) 49605 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr16-1745 chr16 83541313 83541523 + 17.4 0.000 intron (NM_001220489, intron 6 of 12) intron (NM_001220489, intron 6 of 12) 33072 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr5-2055 chr5 127813655 127813865 + 17.4 0.000 intron (NM_001317938, intron 5 of 6) intron (NM_001317938, intron 5 of 6) 110371 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr6-1119 chr6 137892213 137892423 + 17.4 0.000 Intergenic L1MC5a|LINE|L1 -24085 NR_049793 100130476 Hs.598050 NR_049793 ENSG00000237499 WAKMAR2 lnc-TNFAIP3 wound and keratinocyte migration associated lncRNA 2 ncRNA chr20-639 chr20 59011198 59011408 + 17.4 0.000 Intergenic Intergenic -4049 NM_001336 1522 Hs.252549 NM_001336 ENSG00000101160 CTSZ CTSX cathepsin Z protein-coding chr5-1195 chr5 71922683 71922893 + 17.4 0.000 Intergenic Intergenic -184687 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr16-525 chr16 1106288 1106498 + 17.4 0.000 Intergenic Intergenic -10149 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr19-1577 chr19 5182779 5182989 + 17.4 0.000 Intergenic Intergenic 157928 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr11-2241 chr11 74636596 74636806 + 17.4 0.000 intron (NM_001363597, intron 11 of 11) intron (NM_001363597, intron 11 of 11) 44119 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr5-1446 chr5 35198261 35198471 + 17.4 0.000 intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) 32121 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr16-1204 chr16 48623358 48623568 + 17.4 0.000 Intergenic Intergenic -13283 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr2-1193 chr2 127733791 127734001 + 17.4 0.000 intron (NM_018383, intron 7 of 21) MIR3|SINE|MIR 32399 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding chr15-1425 chr15 63476328 63476538 + 17.4 0.000 Intergenic Intergenic -28078 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr19-1417 chr19 48617579 48617789 + 17.4 0.000 intron (NM_001270490, intron 1 of 5) intron (NM_001270490, intron 1 of 5) 1494 NM_000979 6141 Hs.515517 NM_000979 ENSG00000063177 RPL18 DBA18|L18 ribosomal protein L18 protein-coding chr19-1357 chr19 49895890 49896100 + 17.4 0.000 exon (NM_001258017, exon 5 of 10) exon (NM_001258017, exon 5 of 10) 892 NM_152899 259307 Hs.574492 NM_152899 ENSG00000104951 IL4I1 FIG1|LAAO|LAO interleukin 4 induced 1 protein-coding chr5-994 chr5 61642123 61642333 + 17.4 0.000 intron (NR_126525, intron 1 of 1) L3|LINE|CR1 4447 NR_126525 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr17-648 chr17 57084972 57085182 + 17.4 0.000 promoter-TSS (NM_001370425) promoter-TSS (NM_001370425) -169 NM_003488 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr9-1303 chr9 124574766 124574976 + 17.4 0.000 intron (NM_033334, intron 2 of 9) L3|LINE|CR1 -67472 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr20-596 chr20 41072637 41072847 + 17.4 0.000 intron (NM_003286, intron 3 of 20) intron (NM_003286, intron 3 of 20) 43920 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr9-1033 chr9 130780763 130780973 + 17.4 0.000 intron (NM_007313, intron 1 of 10) intron (NM_007313, intron 1 of 10) -54386 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr6-708 chr6 47780898 47781108 + 17.4 0.000 Intergenic Intergenic -1036 NM_181744 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr15-639 chr15 92909253 92909463 + 17.4 0.000 intron (NM_001042572, intron 2 of 12) intron (NM_001042572, intron 2 of 12) 4959 NR_036136 100422995 NR_036136 ENSG00000284324 MIR3175 mir-3175 microRNA 3175 ncRNA chr17-1340 chr17 40139946 40140156 + 17.4 0.000 promoter-TSS (NM_007359) promoter-TSS (NM_007359) -486 NM_007359 22794 Hs.743287 NM_007359 ENSG00000108349 CASC3 BTZ|MLN51 CASC3 exon junction complex subunit protein-coding chr13-533 chr13 41145232 41145442 + 17.4 0.000 intron (NR_120423, intron 1 of 3) L1MD|LINE|L1 12409 NR_120423 101929140 Hs.663088 NR_120423 ENSG00000278390 LOC101929140 - uncharacterized LOC101929140 ncRNA chr22-755 chr22 27952066 27952276 + 17.4 0.000 intron (NR_026963, intron 2 of 4) AluJr4|SINE|Alu -31559 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr6-1698 chr6 18718039 18718249 + 17.4 0.000 intron (NR_149116, intron 6 of 7) intron (NR_149116, intron 6 of 7) 146360 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr2-3640 chr2 138516388 138516598 + 17.4 0.000 intron (NM_001001664, intron 1 of 10) intron (NM_001001664, intron 1 of 10) 14723 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr1-3913 chr1 83857187 83857397 + 17.4 0.000 intron (NR_119374, intron 1 of 2) intron (NR_119374, intron 1 of 2) 3254 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr4-383 chr4 997750 997960 + 17.4 0.000 intron (NM_000203, intron 2 of 13) intron (NM_000203, intron 2 of 13) -1855 NM_001363576 3425 Hs.89560 NM_000203 ENSG00000127415 IDUA IDA|MPS1 iduronidase alpha-L- protein-coding chr13-840 chr13 75687147 75687357 + 17.4 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 50922 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr4-960 chr4 8027795 8028005 + 17.4 0.000 intron (NM_001130083, intron 11 of 20) intron (NM_001130083, intron 11 of 20) -22519 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chrX-152 chrX 15493192 15493402 + 17.4 0.000 promoter-TSS (NM_001018109) promoter-TSS (NM_001018109) 36 NM_001018109 8544 Hs.495728 NM_003662 ENSG00000087842 PIR - pirin protein-coding chr1-2043 chr1 220733177 220733387 + 17.4 0.000 Intergenic Intergenic -15040 NM_001331042 54996 Hs.369042 NM_017898 ENSG00000117791 MARC2 MOSC2 mitochondrial amidoxime reducing component 2 protein-coding chr22-787 chr22 46362099 46362309 + 17.4 0.000 3' UTR (NM_014246, exon 35 of 35) 3' UTR (NM_014246, exon 35 of 35) 26490 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr8-1001 chr8 132921341 132921551 + 17.4 0.000 intron (NM_003235, intron 21 of 47) intron (NM_003235, intron 21 of 47) 54488 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr3-1890 chr3 145018126 145018336 + 17.4 0.000 Intergenic Intergenic 1045150 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr5-1201 chr5 81126073 81126283 + 17.4 0.000 intron (NM_006909, intron 16 of 26) intron (NM_006909, intron 16 of 26) -107142 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr10-1579 chr10 13834628 13834838 + 17.4 0.000 intron (NM_001318336, intron 2 of 23) intron (NM_001318336, intron 2 of 23) -127166 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr1-2644 chr1 156425130 156425340 + 17.4 0.000 intron (NM_006365, intron 2 of 6) MER5A|DNA|hAT-Charlie -3463 NR_135268 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr6-681 chr6 158704291 158704501 + 17.4 0.000 intron (NM_001242394, intron 6 of 17) intron (NM_001242394, intron 6 of 17) 40993 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr2-2342 chr2 190947691 190947901 + 17.4 0.000 intron (NM_014905, intron 14 of 17) intron (NM_014905, intron 14 of 17) 66454 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr5-1398 chr5 139725144 139725354 + 17.4 0.000 Intergenic Intergenic 20974 NR_105053 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr11-2102 chr11 117516500 117516710 + 17.4 0.000 exon (NM_001367904, exon 8 of 15) exon (NM_001367904, exon 8 of 15) 188751 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr3-2417 chr3 195123282 195123492 + 17.4 0.000 intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) 11193 NR_036089 100422926 NR_036089 ENSG00000265333 MIR3137 - microRNA 3137 ncRNA chr12-1566 chr12 115375435 115375645 + 17.4 0.000 Intergenic Intergenic -691365 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr6-2373 chr6 136494156 136494366 + 17.4 0.000 intron (NM_001198617, intron 1 of 15) intron (NM_001198617, intron 1 of 15) -27386 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr4-506 chr4 87985615 87985825 + 17.4 0.000 Intergenic Intergenic 10006 NM_001040058 6696 Hs.313 NM_000582 ENSG00000118785 SPP1 BNSP|BSPI|ETA-1|OPN secreted phosphoprotein 1 protein-coding chr2-1769 chr2 182915506 182915716 + 17.4 0.000 3' UTR (NM_205842, exon 32 of 32) 3' UTR (NM_205842, exon 32 of 32) -48974 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr11-501 chr11 236708 236918 + 17.4 0.000 promoter-TSS (NM_012239) promoter-TSS (NM_012239) 118 NM_001370317 23410 Hs.716456 NM_012239 ENSG00000142082 SIRT3 SIR2L3 sirtuin 3 protein-coding chr14-806 chr14 88552099 88552309 + 17.4 0.000 intron (NM_007039, intron 1 of 18) MIR3|SINE|MIR 2803 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr7-915 chr7 137667886 137668096 + 17.4 0.000 intron (NM_001321710, intron 3 of 32) MIRb|SINE|MIR 178341 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr1-3594 chr1 18697573 18697783 + 17.4 0.000 intron (NM_001135254, intron 5 of 8) intron (NM_001135254, intron 5 of 8) 66832 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr20-363 chr20 25294494 25294704 + 17.4 0.000 TTS (NM_015600) TTS (NM_015600) 46514 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr1-2216 chr1 117612889 117613099 + 17.4 0.000 intron (NM_017709, intron 1 of 1) intron (NM_017709, intron 1 of 1) 6946 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr3-445 chr3 127734793 127735003 + 17.4 0.000 intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 61946 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr7-1839 chr7 135621175 135621385 + 17.4 0.000 intron (NM_015135, intron 30 of 42) intron (NM_015135, intron 30 of 42) -41234 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr2-1933 chr2 207473164 207473374 + 17.4 0.000 Intergenic Intergenic -56693 NR_163947 chr6-987 chr6 157107936 157108146 + 17.4 0.000 intron (NM_020732, intron 6 of 19) intron (NM_020732, intron 6 of 19) 71614 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr14-727 chr14 74853066 74853276 + 17.4 0.000 3' UTR (NM_001080408, exon 3 of 3) 3' UTR (NM_001080408, exon 3 of 3) 10663 NM_001243007 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding chr1-1907 chr1 206791815 206792025 + 17.4 0.000 intron (NM_153758, intron 1 of 6) intron (NM_153758, intron 1 of 6) -19426 NM_000572 3586 Hs.193717 NM_000572 ENSG00000136634 IL10 CSIF|GVHDS|IL-10|IL10A|TGIF interleukin 10 protein-coding chr19-1834 chr19 6057104 6057314 + 17.4 0.000 intron (NM_000635, intron 1 of 17) intron (NM_000635, intron 1 of 17) 53291 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr7-1766 chr7 55545576 55545786 + 17.4 0.000 intron (NM_030796, intron 1 of 4) intron (NM_030796, intron 1 of 4) -7014 NM_001284283 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chrX-657 chrX 110418352 110418562 + 17.4 0.000 promoter-TSS (NM_020769) promoter-TSS (NM_020769) -600 NM_020769 57529 Hs.201071 NM_020769 ENSG00000243978 RTL9 MAR9|MART9|RGAG1|SIRH10 retrotransposon Gag like 9 protein-coding chr4-1390 chr4 149886029 149886239 + 17.4 0.000 Intergenic Intergenic -70291 NM_001363509 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr5-823 chr5 329347 329557 + 17.4 0.000 intron (NM_020731, intron 1 of 11) AluJr|SINE|Alu 25276 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr1-737 chr1 20732147 20732357 + 17.4 0.000 5' UTR (NM_001103160, exon 1 of 9) 5' UTR (NM_001103160, exon 1 of 9) 451 NM_001103161 400745 Hs.591522 NM_001103160 ENSG00000189410 SH2D5 - SH2 domain containing 5 protein-coding chr6-433 chr6 106325770 106325980 + 17.4 0.000 promoter-TSS (NM_001286107) promoter-TSS (NM_001286107) -55 NM_001286111 9474 Hs.486063 NM_004849 ENSG00000057663 ATG5 APG5|APG5-LIKE|APG5L|ASP|SCAR25|hAPG5 autophagy related 5 protein-coding chr11-2369 chr11 130672317 130672527 + 17.4 0.000 promoter-TSS (NM_001271983) promoter-TSS (NM_001271983) -534 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding chr17-1487 chr17 7843739 7843949 + 17.4 0.000 intron (NM_001080424, intron 1 of 21) CpG 3927 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr20-478 chr20 8646847 8647057 + 17.4 0.000 intron (NM_182734, intron 5 of 32) intron (NM_182734, intron 5 of 32) -184233 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr11-736 chr11 12236175 12236385 + 17.4 0.000 intron (NR_144420, intron 16 of 27) intron (NR_144420, intron 16 of 27) -50620 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr9-1259 chr9 111525159 111525369 + 17.4 0.000 promoter-TSS (NM_001007169) promoter-TSS (NM_001007169) 85 NM_133464 158399 Hs.584864 NM_133464 ENSG00000173258 ZNF483 ZKSCAN16|ZSCAN48 zinc finger protein 483 protein-coding chr5-2377 chr5 87393474 87393684 + 17.4 0.000 TTS (NM_001199189) TTS (NM_001199189) 19325 NM_001199189 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr6-873 chr6 57064810 57065020 + 17.4 0.000 Intergenic L1M7|LINE|L1 18168 NM_001286276 57691 Hs.709521 NM_020931 ENSG00000168116 KIAA1586 - KIAA1586 protein-coding chr7-1558 chr7 33808012 33808222 + 17.4 0.000 Intergenic Chap1_Mam|DNA|hAT-Charlie -96798 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr12-1599 chr12 43912978 43913188 + 17.4 0.000 intron (NM_001286213, intron 2 of 6) Charlie4z|DNA|hAT-Charlie 77002 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr12-720 chr12 11719823 11720033 + 17.4 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 70074 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr6-1389 chr6 111259128 111259338 + 17.4 0.000 promoter-TSS (NM_153369) promoter-TSS (NM_153369) -106 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr6-411 chr6 33613801 33614011 + 17.4 0.000 Intergenic Intergenic -7416 NM_002224 3710 Hs.65758 NM_002224 ENSG00000096433 ITPR3 IP3R|IP3R3 inositol 1,4,5-trisphosphate receptor type 3 protein-coding chr17-2334 chr17 57557779 57557989 + 17.4 0.000 intron (NM_001322250, intron 7 of 13) intron (NM_001322250, intron 7 of 13) -34287 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr7-1136 chr7 41319738 41319948 + 17.4 0.000 Intergenic Intergenic 218239 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr4-1332 chr4 151676343 151676553 + 17.4 0.000 intron (NM_004564, intron 11 of 12) intron (NM_004564, intron 11 of 12) 84559 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr20-441 chr20 4973645 4973855 + 17.4 0.000 intron (NM_203327, intron 1 of 16) intron (NM_203327, intron 1 of 16) 27760 NM_005116 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr20-527 chr20 33908325 33908535 + 17.4 0.000 Intergenic LTR16A2|LTR|ERVL -85481 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr2-1196 chr2 146037672 146037882 + 17.4 0.000 Intergenic Intergenic -549280 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr1-2168 chr1 27537920 27538130 + 17.4 0.000 intron (NM_001029882, intron 6 of 6) intron (NM_001029882, intron 6 of 6) -47858 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr12-917 chr12 52020794 52021004 + 17.4 0.000 Intergenic Intergenic -1933 NM_001202233 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr1-3362 chr1 95087195 95087405 + 17.4 0.000 Intergenic LTR48|LTR|ERV1 -5217 NM_001199679 148534 Hs.483512 NM_152487 ENSG00000152078 TLCD4 TMEM56 TLC domain containing 4 protein-coding chr12-667 chr12 123398640 123398850 + 17.4 0.000 intron (NR_136910, intron 5 of 8) intron (NR_136910, intron 5 of 8) 7470 NM_001324506 387893 Hs.443735 NM_020382 ENSG00000183955 KMT5A PR-Set7|PR/SET07|SET07|SET8|SETD8 lysine methyltransferase 5A protein-coding chr9-1009 chr9 97990427 97990637 + 17.4 0.000 intron (NM_006401, intron 1 of 6) intron (NM_006401, intron 1 of 6) 7191 NM_006401 10541 Hs.730654 NM_006401 ENSG00000136938 ANP32B APRIL|PHAPI2|SSP29 acidic nuclear phosphoprotein 32 family member B protein-coding chr2-1977 chr2 27663659 27663869 + 17.4 0.000 promoter-TSS (NM_001282729) promoter-TSS (NM_001282729) 76 NM_001282732 9913 Hs.6232 NM_014860 ENSG00000119760 SUPT7L SPT7L|STAF65|STAF65(gamma)|STAF65G|SUPT7H SPT7 like, STAGA complex gamma subunit protein-coding chr7-994 chr7 103344694 103344904 + 17.4 0.000 promoter-TSS (NM_001362667) promoter-TSS (NM_001362667) -32 NM_014377 27000 Hs.558476 NM_014377 ENSG00000105821 DNAJC2 MPHOSPH11|MPP11|ZRF1|ZUO1 DnaJ heat shock protein family (Hsp40) member C2 protein-coding chr17-1283 chr17 937701 937911 + 17.4 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 28174 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr8-1087 chr8 13353293 13353503 + 17.4 0.000 intron (NM_024767, intron 4 of 4) intron (NM_024767, intron 4 of 4) -76614 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr17-1988 chr17 58786379 58786589 + 17.4 0.000 intron (NM_014906, intron 1 of 6) MER44C|DNA|TcMar-Tigger 30615 NR_048561 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding chr9-1212 chr9 125199524 125199734 + 17.4 0.000 promoter-TSS (NM_005833) promoter-TSS (NM_005833) 767 NR_135145 105376271 Hs.522392 NR_135145 LOC105376271 - uncharacterized LOC105376271 ncRNA chr12-1270 chr12 67747847 67748057 + 17.4 0.000 Intergenic Intergenic -18477 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr6-829 chr6 141451558 141451768 + 17.4 0.000 Intergenic Intergenic 637136 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr1-1663 chr1 15525418 15525628 + 17.4 0.000 promoter-TSS (NM_032996) promoter-TSS (NM_032996) -733 NM_032996 842 Hs.329502 NM_001229 ENSG00000132906 CASP9 APAF-3|APAF3|ICE-LAP6|MCH6|PPP1R56 caspase 9 protein-coding chr3-1316 chr3 23017759 23017969 + 17.4 0.000 Intergenic Intergenic 184714 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr11-2365 chr11 119421800 119422010 + 17.4 0.000 5' UTR (NM_001311160, exon 1 of 4) 5' UTR (NM_001311160, exon 1 of 4) 657 NM_001311160 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr3-1101 chr3 47108614 47108824 + 17.4 0.000 intron (NR_146158, intron 5 of 21) intron (NR_146158, intron 5 of 21) 55258 NM_014159 29072 Hs.517941 NM_012271 ENSG00000181555 SETD2 HBP231|HIF-1|HIP-1|HSPC069|HYPB|KMT3A|LLS|SET2|p231HBP SET domain containing 2, histone lysine methyltransferase protein-coding chr2-1234 chr2 69754975 69755185 + 17.4 0.000 intron (NM_001320700, intron 1 of 12) L1MB4|LINE|L1 12946 NM_001365496 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr11-758 chr11 42239138 42239348 + 17.4 0.000 intron (NR_038309, intron 3 of 5) intron (NR_038309, intron 3 of 5) 14447 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr8-1544 chr8 103859466 103859676 + 17.4 0.000 intron (NR_145711, intron 1 of 21) LTR78B|LTR|ERV1 40351 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr12-950 chr12 62793900 62794110 + 17.4 0.000 intron (NM_020700, intron 3 of 9) intron (NM_020700, intron 3 of 9) 141145 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr5-1468 chr5 74556699 74556909 + 17.3 0.000 Intergenic Intergenic -19828 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA chr11-1210 chr11 3153509 3153719 + 17.3 0.000 intron (NM_145638, intron 1 of 20) intron (NM_145638, intron 1 of 20) 11696 NM_020896 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr18-380 chr18 44149749 44149959 + 17.3 0.000 Intergenic Intergenic 381843 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr3-1652 chr3 150149641 150149851 + 17.3 0.000 intron (NR_136187, intron 2 of 2) intron (NR_136187, intron 2 of 2) 53303 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr4-907 chr4 123418426 123418636 + 17.3 0.000 Intergenic Intergenic 18991 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr13-405 chr13 110529980 110530190 + 17.3 0.000 intron (NM_017817, intron 1 of 1) intron (NM_017817, intron 1 of 1) -21906 NR_046583 100874203 Hs.508716 NR_046583 ENSG00000232814 COL4A2-AS1 - COL4A2 antisense RNA 1 ncRNA chr12-293 chr12 49131374 49131584 + 17.3 0.000 promoter-TSS (NM_006082) promoter-TSS (NM_006082) -84 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr21-304 chr21 37459688 37459898 + 17.3 0.000 intron (NM_001347721, intron 2 of 11) intron (NM_001347721, intron 2 of 11) 39494 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr9-975 chr9 127919421 127919631 + 17.3 0.000 Intergenic Intergenic -2485 NM_175039 27090 Hs.3972 NM_014403 ENSG00000136840 ST6GALNAC4 IV|SIAT3-C|SIAT3C|SIAT7-D|SIAT7D|ST6GALNACIV|ST6GalNAc ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding chr2-2667 chr2 221289451 221289661 + 17.3 0.000 Intergenic MIRb|SINE|MIR 282748 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr6-1147 chr6 160328145 160328355 + 17.3 0.000 Intergenic Intergenic -20128 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr1-1365 chr1 32215797 32216007 + 17.3 0.000 TTS (NM_001366191) TTS (NM_001366191) -5682 NM_003757 8668 Hs.530096 NM_003757 ENSG00000084623 EIF3I EIF3S2|PRO2242|TRIP-1|TRIP1|eIF3-beta|eIF3-p36 eukaryotic translation initiation factor 3 subunit I protein-coding chr10-586 chr10 71377427 71377637 + 17.3 0.000 Intergenic CpG -19388 NM_052836 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr14-653 chr14 35050624 35050834 + 17.3 0.000 intron (NM_001079519, intron 3 of 6) intron (NM_001079519, intron 3 of 6) 4485 NM_001289022 283635 Hs.446357 NM_173607 ENSG00000151327 FAM177A1 C14orf24 family with sequence similarity 177 member A1 protein-coding chr15-634 chr15 77402717 77402927 + 17.3 0.000 intron (NM_024776, intron 1 of 7) intron (NM_024776, intron 1 of 7) 17282 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding chr1-1795 chr1 91736978 91737188 + 17.3 0.000 intron (NR_036634, intron 5 of 17) intron (NR_036634, intron 5 of 17) 149068 NR_036634 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr11-786 chr11 3641982 3642192 + 17.3 0.000 promoter-TSS (NM_001297668) promoter-TSS (NM_001297668) -95 NM_001297668 116969 Hs.125680 NM_053017 ENSG00000167311 ART5 ARTC5 ADP-ribosyltransferase 5 protein-coding chr20-535 chr20 45088266 45088476 + 17.3 0.000 Intergenic Intergenic 12756 NM_001322799 3787 Hs.117780 NM_002251 ENSG00000124134 KCNS1 Kv9.1 potassium voltage-gated channel modifier subfamily S member 1 protein-coding chr7-1223 chr7 112084498 112084708 + 17.3 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 121796 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr6-539 chr6 90587098 90587308 + 17.3 0.000 promoter-TSS (NM_003188) promoter-TSS (NM_003188) -131 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr5-929 chr5 672735 672945 + 17.3 0.000 intron (NM_007030, intron 2 of 3) intron (NM_007030, intron 2 of 3) 20512 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr2-1726 chr2 229416310 229416520 + 17.3 0.000 intron (NM_139072, intron 9 of 12) intron (NM_139072, intron 9 of 12) -145128 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr7-833 chr7 80919033 80919243 + 17.3 0.000 promoter-TSS (NM_006379) promoter-TSS (NM_006379) -87 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr17-961 chr17 76726430 76726640 + 17.3 0.000 promoter-TSS (NM_001081461) promoter-TSS (NM_001081461) 71 NM_001081461 23210 Hs.514505 NM_015167 ENSG00000070495 JMJD6 PSR|PTDSR|PTDSR1 jumonji domain containing 6, arginine demethylase and lysine hydroxylase protein-coding chr9-826 chr9 108296035 108296245 + 17.3 0.000 Intergenic Intergenic 559846 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr12-820 chr12 8914029 8914239 + 17.3 0.000 promoter-TSS (NM_004426) promoter-TSS (NM_004426) -375 NM_004426 1911 Hs.744902 NM_004426 ENSG00000111752 PHC1 EDR1|HPH1|MCPH11|RAE28 polyhomeotic homolog 1 protein-coding chr8-954 chr8 79923668 79923878 + 17.3 0.000 intron (NM_014018, intron 2 of 2) intron (NM_014018, intron 2 of 2) -52036 NR_110954 101927040 Hs.350876 NR_110954 ENSG00000249328 LOC101927040 - uncharacterized LOC101927040 ncRNA chr12-779 chr12 132488682 132488892 + 17.3 0.000 Intergenic Intergenic -1364 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr1-1102 chr1 170532126 170532336 + 17.3 0.000 promoter-TSS (NR_027397) promoter-TSS (NR_027397) 65 NR_027397 92344 Hs.183702 NM_152281 ENSG00000120370 GORAB GO|NTKLBP1|SCYL1BP1 golgin, RAB6 interacting protein-coding chr16-1108 chr16 88429085 88429295 + 17.3 0.000 exon (NM_001367624, exon 1 of 1) exon (NM_001367624, exon 1 of 1) 1719 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr12-1161 chr12 9364782 9364992 + 17.3 0.000 Intergenic MER101B|LTR|ERV1 -2577 NR_120479 101930452 Hs.734183 NR_120479 ENSG00000260423 LINC02367 - long intergenic non-protein coding RNA 2367 ncRNA chr22-798 chr22 50610186 50610396 + 17.3 0.000 exon (NM_012324, exon 11 of 12) exon (NM_012324, exon 11 of 12) 9498 NM_012324 23542 Hs.558180 NM_012324 ENSG00000008735 MAPK8IP2 IB-2|IB2|JIP2|PRKM8IPL mitogen-activated protein kinase 8 interacting protein 2 protein-coding chr16-976 chr16 67844449 67844659 + 17.3 0.000 TTS (NM_020457) TTS (NM_020457) 2234 NM_020457 57215 Hs.632200 NM_020457 ENSG00000168286 THAP11 CTG-B43a|CTG-B45d|HRIHFB2206|RONIN THAP domain containing 11 protein-coding chr10-1210 chr10 12540599 12540809 + 17.3 0.000 intron (NM_001351032, intron 3 of 11) intron (NM_001351032, intron 3 of 11) -38049 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 - microRNA 4480 ncRNA chr3-1326 chr3 52456594 52456804 + 17.3 0.000 intron (NM_007184, intron 1 of 20) intron (NM_007184, intron 1 of 20) 1095 NM_001276293 11188 Hs.435290 NM_007184 ENSG00000010322 NISCH I-1|IR1|IRAS|hIRAS nischarin protein-coding chr5-765 chr5 14720468 14720678 + 17.3 0.000 intron (NM_054027, intron 8 of 11) intron (NM_054027, intron 8 of 11) 7879 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr11-1792 chr11 75761125 75761335 + 17.3 0.000 intron (NR_046090, intron 3 of 3) intron (NR_046090, intron 3 of 3) 7417 NR_046090 283214 Hs.591972 NR_046090 ENSG00000247867 LOC283214 - uncharacterized LOC283214 ncRNA chr5-1613 chr5 65774292 65774502 + 17.3 0.000 intron (NM_020726, intron 3 of 12) intron (NM_020726, intron 3 of 12) 52192 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chr13-680 chr13 23428200 23428410 + 17.3 0.000 non-coding (NR_103450, exon 2 of 2) non-coding (NR_103450, exon 2 of 2) 5397 NM_014363 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr3-1083 chr3 157137407 157137617 + 17.3 0.000 Intergenic Intergenic -14510 NR_034007 339894 Hs.478050 NR_034007 ENSG00000243629 LINC00880 - long intergenic non-protein coding RNA 880 ncRNA chr10-1148 chr10 97332993 97333203 + 17.3 0.000 3' UTR (NM_012083, exon 1 of 1) 3' UTR (NM_012083, exon 1 of 1) 1631 NM_012083 23401 Hs.140720 NM_012083 ENSG00000181274 FRAT2 FRAT-2 FRAT regulator of WNT signaling pathway 2 protein-coding chr8-637 chr8 51809396 51809606 + 17.3 0.000 promoter-TSS (NM_144651) promoter-TSS (NM_144651) -56 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr6-1805 chr6 132188906 132189116 + 17.3 0.000 Intergenic Intergenic 55033 NR_038981 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr6-810 chr6 44387484 44387694 + 17.3 0.000 promoter-TSS (NM_001253) promoter-TSS (NM_001253) -117 NM_001253 988 Hs.485471 NM_001253 ENSG00000096401 CDC5L CDC5|CDC5-LIKE|CEF1|PCDC5RP|dJ319D22.1 cell division cycle 5 like protein-coding chr21-207 chr21 41660646 41660856 + 17.3 0.000 Intergenic Intergenic -18551 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr3-690 chr3 41199469 41199679 + 17.3 0.000 promoter-TSS (NM_001330729) promoter-TSS (NM_001330729) 69 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr12-1831 chr12 16027135 16027345 + 17.3 0.000 intron (NM_015954, intron 6 of 8) L1MCa|LINE|L1 115908 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr3-1142 chr3 45897020 45897230 + 17.3 0.000 intron (NM_031200, intron 2 of 2) intron (NM_031200, intron 2 of 2) 10582 NM_006641 10803 Hs.225946 NM_006641 ENSG00000173585 CCR9 CC-CKR-9|CDw199|GPR-9-6|GPR28 C-C motif chemokine receptor 9 protein-coding chr1-1668 chr1 39130402 39130612 + 17.3 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 46340 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr15-1179 chr15 33086624 33086834 + 17.3 0.000 intron (NM_001277313, intron 5 of 20) intron (NM_001277313, intron 5 of 20) -18555 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr11-2602 chr11 130514325 130514535 + 17.3 0.000 Intergenic Intergenic 65456 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr19-992 chr19 37719568 37719778 + 17.3 0.000 promoter-TSS (NM_032689) promoter-TSS (NM_032689) 88 NM_032689 84775 Hs.116622 NM_032689 ENSG00000198182 ZNF607 - zinc finger protein 607 protein-coding chr16-1089 chr16 71961588 71961798 + 17.3 0.000 intron (NM_181536, intron 16 of 29) MLT1H1|LTR|ERVL-MaLR 38285 NM_181536 342372 Hs.675286 NM_181536 ENSG00000277481 PKD1L3 - polycystin 1 like 3, transient receptor potential channel interacting protein-coding chr2-2429 chr2 40244733 40244943 + 17.3 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 185466 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr4-806 chr4 80173981 80174191 + 17.3 0.000 Intergenic LTR33|LTR|ERVL -11184 NM_020226 56978 Hs.373642 NM_020226 ENSG00000152784 PRDM8 EPM10|KMT8D|PFM5 PR/SET domain 8 protein-coding chr12-547 chr12 110583211 110583421 + 17.3 0.000 promoter-TSS (NM_139283) promoter-TSS (NM_139283) 2 NR_138550 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr2-3234 chr2 232634869 232635079 + 17.3 0.000 intron (NM_025202, intron 1 of 3) intron (NM_025202, intron 1 of 3) 1370 NM_025202 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr4-690 chr4 186191647 186191857 + 17.3 0.000 promoter-TSS (NR_046264) promoter-TSS (NR_046264) 185 NM_207352 285440 Hs.587231 NM_207352 ENSG00000145476 CYP4V2 BCD|CYP4AH1 cytochrome P450 family 4 subfamily V member 2 protein-coding chr3-1568 chr3 39106373 39106583 + 17.3 0.000 intron (NR_103866, intron 1 of 8) intron (NR_103866, intron 1 of 8) 1149 NR_103866 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding chr4-1357 chr4 7647880 7648090 + 17.3 0.000 intron (NM_020777, intron 4 of 26) intron (NM_020777, intron 4 of 26) -106105 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr7-1872 chr7 43954638 43954848 + 17.3 0.000 3' UTR (NM_015983, exon 7 of 7) 3' UTR (NM_015983, exon 7 of 7) 28307 NM_015983 51619 Hs.19196 NM_015983 ENSG00000078967 UBE2D4 HBUCE1 ubiquitin conjugating enzyme E2 D4 (putative) protein-coding chr4-905 chr4 113684777 113684987 + 17.3 0.000 intron (NM_001321585, intron 2 of 19) intron (NM_001321585, intron 2 of 19) 76856 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr12-884 chr12 92144157 92144367 + 17.3 0.000 exon (NM_001731, exon 2 of 2) exon (NM_001731, exon 2 of 2) -1431 NR_132339 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chrX-250 chrX 129850747 129850957 + 17.3 0.000 Intergenic SVA_D|Retroposon|SVA -6966 NM_016032 51114 Hs.193566 NM_016032 ENSG00000188706 ZDHHC9 CGI89|CXorf11|DHHC9|MMSA1|MRXSZ|ZDHHC10|ZNF379|ZNF380 zinc finger DHHC-type containing 9 protein-coding chr17-1139 chr17 75877144 75877354 + 17.3 0.000 intron (NM_033452, intron 1 of 5) intron (NM_033452, intron 1 of 5) 1332 NM_033452 91107 Hs.293660 NM_033452 ENSG00000132481 TRIM47 GOA|RNF100 tripartite motif containing 47 protein-coding chr2-1265 chr2 40760163 40760373 + 17.3 0.000 Intergenic Intergenic -247833 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr2-1662 chr2 71130490 71130700 + 17.3 0.000 promoter-TSS (NM_005791) promoter-TSS (NM_005791) -39 NM_005791 10199 Hs.656208 NM_005791 ENSG00000124383 MPHOSPH10 CT90|MPP10|MPP10P|PPP1R106 M-phase phosphoprotein 10 protein-coding chr11-2032 chr11 65266464 65266674 + 17.3 0.000 intron (NM_002689, intron 1 of 17) intron (NM_002689, intron 1 of 17) 4607 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr14-1031 chr14 67987571 67987781 + 17.3 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 164084 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr1-2772 chr1 116777725 116777935 + 17.3 0.000 Intergenic HAL1|LINE|L1 23400 NM_001328609 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding chr16-879 chr16 72787576 72787786 + 17.3 0.000 exon (NM_006885, exon 10 of 10) exon (NM_006885, exon 10 of 10) -122711 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr17-1031 chr17 50931291 50931501 + 17.3 0.000 Intergenic CpG -63418 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr12-1730 chr12 45425469 45425679 + 17.3 0.000 intron (NM_001142679, intron 19 of 19) L1MEd|LINE|L1 132884 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr3-1739 chr3 143769704 143769914 + 17.3 0.000 intron (NM_173653, intron 4 of 15) Chap1_Mam|DNA|hAT-Charlie 78659 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr4-1086 chr4 149896516 149896726 + 17.3 0.000 Intergenic Intergenic -80778 NM_001363509 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr3-1989 chr3 156784194 156784404 + 17.3 0.000 intron (NR_038387, intron 1 of 2) intron (NR_038387, intron 1 of 2) 27722 NR_003284 647033 Hs.745109 NR_003284 PA2G4P4 PA2G4L1 proliferation-associated 2G4 pseudogene 4 pseudo chr16-1522 chr16 50185026 50185236 + 17.3 0.000 intron (NM_001365324, intron 1 of 11) intron (NM_001365324, intron 1 of 11) 31650 NM_001365324 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr6-1691 chr6 15476798 15477008 + 17.3 0.000 intron (NM_004973, intron 5 of 17) intron (NM_004973, intron 5 of 17) 186125 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr8-495 chr8 56241992 56242202 + 17.3 0.000 Intergenic Intergenic 30308 NM_001011671 79145 Hs.436913 NM_024300 ENSG00000170791 CHCHD7 COX23 coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding chr4-1151 chr4 82429402 82429612 + 17.3 0.000 exon (NM_031372, exon 1 of 8) exon (NM_031372, exon 1 of 8) 718 NM_001207000 9987 Hs.527105 NM_005463 ENSG00000152795 HNRNPDL HNRNP|HNRPDL|JKTBP|JKTBP2|LGMD1G|LGMDD3|laAUF1 heterogeneous nuclear ribonucleoprotein D like protein-coding chr5-1703 chr5 109691139 109691349 + 17.3 0.000 intron (NM_002372, intron 1 of 21) intron (NM_002372, intron 1 of 21) 1878 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr2-2127 chr2 53859740 53859950 + 17.3 0.000 exon (NM_001164165, exon 1 of 10) exon (NM_001164165, exon 1 of 10) 122 NM_006794 10936 Hs.40763 NM_006794 ENSG00000119737 GPR75 GPRchr2|WI31133 G protein-coupled receptor 75 protein-coding chr1-1998 chr1 25320477 25320687 + 17.3 0.000 intron (NR_135790, intron 1 of 2) intron (NR_135790, intron 1 of 2) 17672 NR_135793 57035 Hs.259412 NM_020317 ENSG00000117616 RSRP1 C1orf63|NPD014 arginine and serine rich protein 1 protein-coding chr4-1029 chr4 15452146 15452356 + 17.3 0.000 Intergenic Intergenic -17614 NM_020785 57545 Hs.590928 NM_020785 ENSG00000048342 CC2D2A JBTS9|MKS6 coiled-coil and C2 domain containing 2A protein-coding chr4-1021 chr4 7649951 7650161 + 17.3 0.000 intron (NM_020777, intron 4 of 26) intron (NM_020777, intron 4 of 26) -104034 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr8-974 chr8 114512114 114512324 + 17.3 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -1075280 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr18-436 chr18 63831220 63831430 + 17.3 0.000 Intergenic Intergenic 53548 NM_001261830 8710 Hs.138202 NM_003784 ENSG00000166396 SERPINB7 MEGSIN|PPKN|TP55 serpin family B member 7 protein-coding chr2-2497 chr2 156436846 156437056 + 17.3 0.000 intron (NM_000408, intron 1 of 16) intron (NM_000408, intron 1 of 16) 572 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr4-1576 chr4 4781023 4781233 + 17.3 0.000 intron (NR_125892, intron 2 of 2) intron (NR_125892, intron 2 of 2) 19368 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr1-2834 chr1 67112544 67112754 + 17.3 0.000 intron (NM_001276352, intron 5 of 8) AluJb|SINE|Alu 22321 NR_075077 400757 Hs.666621 NM_001013674 ENSG00000203963 C1orf141 - chromosome 1 open reading frame 141 protein-coding chr9-697 chr9 136973519 136973729 + 17.3 0.000 TTS (NR_157392) TTS (NR_157392) -3880 NM_000954 5730 Hs.446429 NM_000954 ENSG00000107317 PTGDS L-PGDS|LPGDS|PDS|PGD2|PGDS|PGDS2 prostaglandin D2 synthase protein-coding chr5-373 chr5 98928986 98929196 + 17.3 0.000 promoter-TSS (NR_036530) promoter-TSS (NR_036530) -43 NR_036530 100289230 Hs.552095 NR_036530 LOC100289230 - uncharacterized LOC100289230 ncRNA chr9-930 chr9 19184218 19184428 + 17.3 0.000 Intergenic Intergenic -46370 NM_001330640 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr11-2415 chr11 10795023 10795233 + 17.3 0.000 Intergenic Intergenic 6480 NR_004403 692223 Hs.723086 NR_004403 ENSG00000238622 SNORD97 U97 small nucleolar RNA, C/D box 97 snoRNA chr7-908 chr7 107643450 107643660 + 17.3 0.000 Intergenic MIR|SINE|MIR -17273 NM_000441 5172 Hs.571246 NM_000441 ENSG00000091137 SLC26A4 DFNB4|EVA|PDS|TDH2B solute carrier family 26 member 4 protein-coding chr17-1005 chr17 81733748 81733958 + 17.3 0.000 Intergenic Intergenic 21569 NM_012140 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr1-3203 chr1 155910735 155910945 + 17.3 0.000 promoter-TSS (NM_001256821) promoter-TSS (NM_001256821) 78 NM_001256821 6016 Hs.491234 NM_006912 ENSG00000143622 RIT1 NS8|RIBB|RIT|ROC1 Ras like without CAAX 1 protein-coding chr2-1245 chr2 177552806 177553016 + 17.3 0.000 promoter-TSS (NM_152517) promoter-TSS (NM_152517) -115 NM_152517 150737 Hs.447659 NM_152517 ENSG00000196659 TTC30B IFT70|IFT70B|fleer tetratricopeptide repeat domain 30B protein-coding chr19-1192 chr19 46982519 46982729 + 17.3 0.000 intron (NM_004491, intron 3 of 6) intron (NM_004491, intron 3 of 6) -37213 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr8-659 chr8 18814670 18814880 + 17.3 0.000 intron (NM_015310, intron 4 of 15) intron (NM_015310, intron 4 of 15) -5908 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr9-1755 chr9 130528002 130528212 + 17.3 0.000 Intergenic Intergenic 51387 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr4-1011 chr4 3575062 3575272 + 17.3 0.000 Intergenic Intergenic -1702 NR_040045 285492 Hs.145563 NM_173661 LINC00955 - long intergenic non-protein coding RNA 955 ncRNA chr11-1874 chr11 1342930 1343140 + 17.3 0.000 Intergenic Intergenic 33327 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA chr21-106 chr21 33947817 33948027 + 17.3 0.000 intron (NR_134558, intron 2 of 2) intron (NR_134558, intron 2 of 2) 16708 NR_134558 100506334 Hs.532855 NM_207472 ENSG00000237945 LINC00649 - long intergenic non-protein coding RNA 649 ncRNA chr11-1380 chr11 106695635 106695845 + 17.3 0.000 intron (NM_001256424, intron 8 of 8) intron (NM_001256424, intron 8 of 8) 322736 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr20-733 chr20 3066542 3066752 + 17.3 0.000 Intergenic AluSx3|SINE|Alu -4973 NM_000915 5020 Hs.113216 NM_000915 ENSG00000101405 OXT OT|OT-NPI|OXT-NPI oxytocin/neurophysin I prepropeptide protein-coding chr12-1202 chr12 117830471 117830681 + 17.3 0.000 intron (NM_173598, intron 3 of 19) intron (NM_173598, intron 3 of 19) 138414 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr1-2262 chr1 205013696 205013906 + 17.3 0.000 intron (NM_001160332, intron 27 of 27) intron (NM_001160332, intron 27 of 27) -29148 NM_001346083 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr4-789 chr4 3488330 3488540 + 17.3 0.000 intron (NM_001363811, intron 3 of 7) intron (NM_001363811, intron 3 of 7) 3891 NM_001256896 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr5-777 chr5 128228088 128228298 + 17.3 0.000 Intergenic Intergenic 144427 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr15-867 chr15 45550447 45550657 + 17.3 0.000 intron (NR_022014, intron 5 of 5) AluSg|SINE|Alu 13301 NR_145777 109617005 NR_145777 ENSG00000207516 SNORA41B - small nucleolar RNA, H/ACA box 41B snoRNA chr4-862 chr4 103198004 103198214 + 17.3 0.000 intron (NM_001813, intron 1 of 48) MIR3|SINE|MIR 234 NM_001813 1062 Hs.75573 NM_001813 ENSG00000138778 CENPE CENP-E|KIF10|MCPH13|PPP1R61 centromere protein E protein-coding chr5-877 chr5 7869601 7869811 + 17.3 0.000 promoter-TSS (NM_024091) promoter-TSS (NM_024091) 558 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr11-3330 chr11 114447852 114448062 + 17.3 0.000 intron (NM_015523, intron 6 of 6) intron (NM_015523, intron 6 of 6) 8490 NM_015523 25996 Hs.677190 NM_015523 ENSG00000076043 REXO2 CGI-114|REX2|RFN|SFN RNA exonuclease 2 protein-coding chr8-188 chr8 70608290 70608500 + 17.3 0.000 promoter-TSS (NM_001317805) promoter-TSS (NM_001317805) 21 NM_014294 23471 Hs.491988 NM_014294 ENSG00000067167 TRAM1 PNAS8|TRAM|TRAMP translocation associated membrane protein 1 protein-coding chr6-854 chr6 14524460 14524670 + 17.3 0.000 Intergenic L2c|LINE|L2 -239111 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr12-580 chr12 112382220 112382430 + 17.3 0.000 5' UTR (NM_001109662, exon 1 of 76) 5' UTR (NM_001109662, exon 1 of 76) 106 NM_001109662 283450 Hs.530943 NM_173813 ENSG00000173064 HECTD4 C12ord51|C12orf51|HEEL|POTAGE HECT domain E3 ubiquitin protein ligase 4 protein-coding chr2-1638 chr2 20579215 20579425 + 17.3 0.000 Intergenic Intergenic 13228 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr12-994 chr12 121210283 121210493 + 17.3 0.000 intron (NR_046373, intron 1 of 10) CpG 259 NM_002560 5025 Hs.321709 NM_002560 ENSG00000135124 P2RX4 P2X4|P2X4R purinergic receptor P2X 4 protein-coding chr1-4113 chr1 242002596 242002806 + 17.3 0.000 Intergenic Intergenic -3603 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr3-2774 chr3 174270950 174271160 + 17.3 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -350259 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr7-1599 chr7 151078504 151078714 + 17.3 0.000 exon (NM_006712, exon 4 of 10) exon (NM_006712, exon 4 of 10) 2200 NM_006712 10922 Hs.647094 NM_006712 ENSG00000164896 FASTK FAST Fas activated serine/threonine kinase protein-coding chr11-1201 chr11 125263553 125263763 + 17.3 0.000 intron (NM_022062, intron 2 of 12) intron (NM_022062, intron 2 of 12) 98907 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr18-401 chr18 22032454 22032664 + 17.3 0.000 Intergenic Intergenic 136409 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA chr2-2989 chr2 42755207 42755417 + 17.3 0.000 3' UTR (NM_001282755, exon 18 of 18) 3' UTR (NM_001282755, exon 18 of 18) 8949 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr19-946 chr19 49128217 49128427 + 17.3 0.000 intron (NR_103842, intron 2 of 28) intron (NR_103842, intron 2 of 28) 8778 NR_103842 8541 Hs.413748 NM_003660 ENSG00000177380 PPFIA3 LPNA3 PTPRF interacting protein alpha 3 protein-coding chr4-651 chr4 148166295 148166505 + 17.3 0.000 intron (NM_000901, intron 4 of 8) intron (NM_000901, intron 4 of 8) 276014 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr15-1109 chr15 82183715 82183925 + 17.3 0.000 intron (NM_001040610, intron 13 of 17) intron (NM_001040610, intron 13 of 17) 78708 NM_001322845 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr2-1653 chr2 46276655 46276865 + 17.3 0.000 Intergenic L2a|LINE|L2 -20647 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr11-2330 chr11 70608647 70608857 + 17.3 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) -22342 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA chr4-487 chr4 99563618 99563828 + 17.3 0.000 promoter-TSS (NM_000253) promoter-TSS (NM_000253) 0 NM_152292 93587 Hs.380412 NM_152292 ENSG00000145331 TRMT10A HEL-S-88|MSSGM|MSSGM1|RG9MTD2|TRM10 tRNA methyltransferase 10A protein-coding chr2-1444 chr2 237093178 237093388 + 17.3 0.000 intron (NM_198189, intron 5 of 8) intron (NM_198189, intron 5 of 8) 7394 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr9-1855 chr9 33946861 33947071 + 17.3 0.000 intron (NR_163243, intron 9 of 24) MER68|LTR|ERVL 5888 NR_003685 100113379 NR_003685 ENSG00000238886 SNORD121A - small nucleolar RNA, C/D box 121A snoRNA chr2-1748 chr2 46224811 46225021 + 17.3 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -72491 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr12-1925 chr12 95805894 95806104 + 17.3 0.000 intron (NR_135016, intron 1 of 1) intron (NR_135016, intron 1 of 1) 2902 NR_135016 105369920 Hs.145556 NR_135016 ENSG00000258292 LINC02410 - long intergenic non-protein coding RNA 2410 ncRNA chr19-853 chr19 30227665 30227875 + 17.3 0.000 Intergenic CpG -144614 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr5-1680 chr5 72353211 72353421 + 17.3 0.000 intron (NM_001284405, intron 8 of 8) L2|LINE|L2 32943 NM_001284403 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr12-2688 chr12 95103175 95103385 + 17.3 0.000 intron (NM_018351, intron 14 of 20) intron (NM_018351, intron 14 of 20) -29662 NM_001127362 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding chr1-849 chr1 229342339 229342549 + 17.3 0.000 exon (NM_145257, exon 2 of 4) exon (NM_145257, exon 2 of 4) 603 NM_145257 126731 Hs.585011 NM_145257 ENSG00000154429 CCSAP C1orf96|CSAP centriole, cilia and spindle associated protein protein-coding chr22-415 chr22 39152800 39153010 + 17.3 0.000 promoter-TSS (NM_175709) promoter-TSS (NM_175709) -225 NM_175709 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr5-688 chr5 172162440 172162650 + 17.3 0.000 intron (NM_005990, intron 1 of 18) intron (NM_005990, intron 1 of 18) 25679 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr10-828 chr10 102394098 102394308 + 17.3 0.000 promoter-TSS (NM_001322935) promoter-TSS (NM_001322935) 93 NM_001322935 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr11-1543 chr11 11010799 11011009 + 17.3 0.000 Intergenic Intergenic 152687 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr19-1002 chr19 50385211 50385421 + 17.3 0.000 intron (NR_046402, intron 1 of 25) L2a|LINE|L2 969 NR_046402 5424 Hs.279413 NM_002691 ENSG00000062822 POLD1 CDC2|CRCS10|MDPL|POLD DNA polymerase delta 1, catalytic subunit protein-coding chr1-3325 chr1 19481394 19481604 + 17.3 0.000 intron (NM_001206541, intron 1 of 8) MIRb|SINE|MIR 2796 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr4-887 chr4 186845265 186845475 + 17.3 0.000 Intergenic Intergenic -121514 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr1-1759 chr1 1352211 1352421 + 17.3 0.000 TTS (NM_001282584) TTS (NM_001282584) -2898 NM_004421 1855 Hs.731450 NM_004421 ENSG00000107404 DVL1 DRS2|DVL|DVL1L1|DVL1P1 dishevelled segment polarity protein 1 protein-coding chr8-1333 chr8 33513546 33513756 + 17.3 0.000 promoter-TSS (NM_001330505) promoter-TSS (NM_001330505) 176 NR_003041 692084 NR_003041 ENSG00000239039 SNORD13 RNU13|SNORD13A|U13 small nucleolar RNA, C/D box 13 snoRNA chr5-671 chr5 177303749 177303959 + 17.3 0.000 promoter-TSS (NM_013237) promoter-TSS (NM_013237) 55 NM_013237 27166 Hs.744904 NM_013237 ENSG00000169230 PRELID1 CGI-106|PRELI|PX19|SBBI12 PRELI domain containing 1 protein-coding chr20-246 chr20 63835144 63835354 + 17.3 0.000 Intergenic (AGGCAG)n|Simple_repeat|Simple_repeat -3985 NM_001369741 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr3-2428 chr3 11020523 11020733 + 17.3 0.000 intron (NM_001348251, intron 6 of 15) Tigger3a|DNA|TcMar-Tigger -1404 NR_046647 100874090 Hs.628542 NR_046647 ENSG00000232287 SLC6A1-AS1 - SLC6A1 antisense RNA 1 ncRNA chr19-1188 chr19 44905682 44905892 + 17.3 0.000 promoter-TSS (NM_001302688) promoter-TSS (NM_001302688) -9 NM_001302688 348 Hs.654439 NM_000041 ENSG00000130203 APOE AD2|APO-E|ApoE4|LDLCQ5|LPG apolipoprotein E protein-coding chr17-1602 chr17 66272915 66273125 + 17.3 0.000 Intergenic Intergenic -29593 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr6-1199 chr6 12045054 12045264 + 17.3 0.000 intron (NM_002114, intron 2 of 8) MamSINE1|SINE|tRNA-RTE 32847 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr9-1122 chr9 96460894 96461104 + 17.3 0.000 intron (NM_014282, intron 2 of 7) MIRb|SINE|MIR 10830 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr9-1506 chr9 29750060 29750270 + 17.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -536564 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr12-823 chr12 27984412 27984622 + 17.3 0.000 Intergenic Intergenic -11784 NM_198965 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr15-534 chr15 70893037 70893247 + 17.3 0.000 promoter-TSS (NM_020147) promoter-TSS (NM_020147) 699 NM_001363732 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr2-1483 chr2 146927294 146927504 + 17.3 0.000 Intergenic Intergenic 340342 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-1213 chr2 228801622 228801832 + 17.3 0.000 Intergenic Intergenic -190332 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr13-304 chr13 49147099 49147309 + 17.3 0.000 intron (NM_001079673, intron 8 of 25) intron (NM_001079673, intron 8 of 25) 36887 NM_014923 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr18-258 chr18 55477569 55477779 + 17.3 0.000 intron (NM_001348217, intron 2 of 18) intron (NM_001348217, intron 2 of 18) -1547 NR_039754 100616290 NR_039754 ENSG00000264571 MIR4529 - microRNA 4529 ncRNA chr15-224 chr15 65132914 65133124 + 17.3 0.000 exon (NM_005707, exon 1 of 5) exon (NM_005707, exon 1 of 5) 789 NM_005707 10081 Hs.458596 NM_005707 ENSG00000090470 PDCD7 ES18|HES18 programmed cell death 7 protein-coding chr15-1182 chr15 36430799 36431009 + 17.3 0.000 Intergenic Intergenic -148722 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr17-793 chr17 21126911 21127121 + 17.3 0.000 promoter-TSS (NM_015510) promoter-TSS (NM_015510) 88 NM_015510 25979 Hs.386989 NM_015510 ENSG00000109016 DHRS7B CGI-93|SDR32C1 dehydrogenase/reductase 7B protein-coding chr6-492 chr6 39930188 39930398 + 17.3 0.000 intron (NM_001358530, intron 1 of 10) intron (NM_001358530, intron 1 of 10) -2577 NM_005943 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr11-2413 chr11 10742957 10743167 + 17.3 0.000 Intergenic Intergenic -8184 NM_014633 9646 Hs.725151 NM_014633 ENSG00000198730 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding chr3-1420 chr3 179455870 179456080 + 17.3 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -4505 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr4-1152 chr4 83256878 83257088 + 17.3 0.000 Intergenic Intergenic 27812 NM_001358921 27235 Hs.144304 NM_015697 ENSG00000173085 COQ2 CL640|COQ10D1|MSA1|PHB:PPT coenzyme Q2, polyprenyltransferase protein-coding chr8-361 chr8 140727398 140727608 + 17.3 0.000 intron (NM_001352718, intron 22 of 32) intron (NM_001352718, intron 22 of 32) 5150 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr19-1258 chr19 2266754 2266964 + 17.3 0.000 Intergenic Intergenic -2627 NM_004152 4946 Hs.446427 NM_004152 ENSG00000104904 OAZ1 AZ1|AZI|OAZ ornithine decarboxylase antizyme 1 protein-coding chr16-841 chr16 89261580 89261790 + 17.3 0.000 Intergenic L1M4|LINE|L1 -34443 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr11-1164 chr11 44138173 44138383 + 17.3 0.000 intron (NM_207122, intron 7 of 13) intron (NM_207122, intron 7 of 13) 42081 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr7-1794 chr7 84354828 84355038 + 17.3 0.000 Intergenic Intergenic -160144 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr10-522 chr10 131962592 131962802 + 17.3 0.000 Intergenic Intergenic 19316 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr12-2109 chr12 54384617 54384827 + 17.3 0.000 promoter-TSS (NM_001290001) promoter-TSS (NM_001290001) 11 NM_001290001 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr15-970 chr15 49418947 49419157 + 17.3 0.000 intron (NM_152647, intron 11 of 15) MamGypLTR1c|LTR|Gypsy -4190 NM_002009 2252 Hs.567268 NM_002009 ENSG00000140285 FGF7 HBGF-7|KGF fibroblast growth factor 7 protein-coding chr12-1585 chr12 127272934 127273144 + 17.3 0.000 Intergenic Intergenic 11244 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr6-777 chr6 63307847 63308057 + 17.3 0.000 intron (NM_001143940, intron 1 of 4) intron (NM_001143940, intron 1 of 4) 12025 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr2-1821 chr2 102166154 102166364 + 17.3 0.000 TTS (NM_001320986) TTS (NM_001320986) 12318 NM_001320983 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr1-2869 chr1 192904690 192904900 + 17.3 0.000 Intergenic Intergenic 43462 NR_126003 102724954 Hs.243488 NR_126003 LINC01032 - long intergenic non-protein coding RNA 1032 ncRNA chr11-1482 chr11 120807482 120807692 + 17.3 0.000 intron (NM_001282470, intron 3 of 19) intron (NM_001282470, intron 3 of 19) 11528 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr22-356 chr22 30235802 30236012 + 17.3 0.000 Intergenic Intergenic -3287 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr10-613 chr10 101783299 101783509 + 17.3 0.000 promoter-TSS (NM_006993) promoter-TSS (NM_006993) 9 NM_006993 10360 Hs.90691 NM_006993 ENSG00000107833 NPM3 PORMIN|TMEM123 nucleophosmin/nucleoplasmin 3 protein-coding chr2-1268 chr2 49248566 49248776 + 17.3 0.000 Intergenic Intergenic -94144 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding chr1-1891 chr1 171788780 171788990 + 17.3 0.000 intron (NM_001007239, intron 4 of 7) intron (NM_001007239, intron 4 of 7) 7225 NM_015935 51603 Hs.494705 NM_014955 ENSG00000010165 EEF1AKNMT 5630401D24Rik|CGI-01|DFNB26|DFNB26M|KIAA0859|METTL13|feat eEF1A lysine and N-terminal methyltransferase protein-coding chr15-640 chr15 96234436 96234646 + 17.3 0.000 intron (NR_125738, intron 2 of 4) intron (NR_125738, intron 2 of 4) -91505 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr13-361 chr13 43019994 43020204 + 17.3 0.000 Intergenic Intergenic -3487 NM_013238 29103 Hs.438830 NM_013238 ENSG00000120675 DNAJC15 DNAJD1|HSD18|MCJ DnaJ heat shock protein family (Hsp40) member C15 protein-coding chr17-983 chr17 30235736 30235946 + 17.3 0.000 promoter-TSS (NM_001045) promoter-TSS (NM_001045) -144 NM_001045 6532 Hs.29792 NM_001045 ENSG00000108576 SLC6A4 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT solute carrier family 6 member 4 protein-coding chr1-1386 chr1 111755673 111755883 + 17.2 0.000 promoter-TSS (NM_198926) promoter-TSS (NM_198926) 19 NM_198926 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr9-556 chr9 6015461 6015671 + 17.2 0.000 promoter-TSS (NM_001243202) promoter-TSS (NM_001243202) 58 NM_001243202 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr11-1072 chr11 72932294 72932504 + 17.2 0.000 intron (NM_014824, intron 8 of 19) L2b|LINE|L2 117988 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr6-905 chr6 135901766 135901976 + 17.2 0.000 intron (NM_018945, intron 1 of 12) intron (NM_018945, intron 1 of 12) 50170 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr18-508 chr18 35515842 35516052 + 17.2 0.000 Intergenic Intergenic -17987 NM_194281 125476 Hs.464903 NM_194281 ENSG00000153391 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding chr18-227 chr18 54743019 54743229 + 17.2 0.000 Intergenic Intergenic -85353 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr12-984 chr12 76549297 76549507 + 17.2 0.000 intron (NM_001319652, intron 1 of 25) HAL1ME|LINE|L1 10369 NM_001319653 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr3-1803 chr3 44056124 44056334 + 17.2 0.000 Intergenic Intergenic -57983 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr14-458 chr14 36320626 36320836 + 17.2 0.000 promoter-TSS (NM_016586) promoter-TSS (NM_016586) -55 NM_001144891 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr10-1405 chr10 94193776 94193986 + 17.2 0.000 intron (NM_001165979, intron 3 of 31) intron (NM_001165979, intron 3 of 31) -85087 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr2-1843 chr2 202135650 202135860 + 17.2 0.000 intron (NM_001277372, intron 12 of 23) MamRTE1|LINE|RTE-BovB -18697 NR_135244 729224 Hs.623895 NR_135243 KIAA2012-AS1 - KIAA2012 antisense RNA 1 ncRNA chr17-886 chr17 40284537 40284747 + 17.2 0.000 TTS (NM_133264) TTS (NM_133264) -3237 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding chr13-201 chr13 113802256 113802466 + 17.2 0.000 intron (NM_001348663, intron 7 of 7) intron (NM_001348663, intron 7 of 7) -13249 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chrX-200 chrX 100820117 100820327 + 17.2 0.000 promoter-TSS (NM_001325) promoter-TSS (NM_001325) -137 NM_001325 1478 Hs.132370 NM_001325 ENSG00000101811 CSTF2 CstF-64 cleavage stimulation factor subunit 2 protein-coding chr6-731 chr6 147063664 147063874 + 17.2 0.000 intron (NR_034115, intron 5 of 10) intron (NR_034115, intron 5 of 10) -95156 NR_132442 106182249 Hs.575390 NR_132442 ENSG00000196634 LUADT1 - lung adenocarcinoma associated transcript 1 ncRNA chr9-823 chr9 94881080 94881290 + 17.2 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 64369 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr1-3300 chr1 1444140 1444350 + 17.2 0.000 Intergenic Intergenic -5444 NM_001039211 219293 Hs.724767 NM_001039211 ENSG00000215915 ATAD3C - ATPase family AAA domain containing 3C protein-coding chr18-299 chr18 74598543 74598753 + 17.2 0.000 promoter-TSS (NR_024484) promoter-TSS (NR_024484) -813 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr11-2196 chr11 23573539 23573749 + 17.2 0.000 Intergenic L1PREC2|LINE|L1 -154454 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr3-993 chr3 31704664 31704874 + 17.2 0.000 intron (NR_049771, intron 1 of 4) intron (NR_049771, intron 1 of 4) 556 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA chr5-931 chr5 9343254 9343464 + 17.2 0.000 intron (NM_003966, intron 3 of 22) intron (NM_003966, intron 3 of 22) -167974 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr17-563 chr17 78254427 78254637 + 17.2 0.000 Intergenic CpG 23222 NM_001204210 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr7-1079 chr7 81299362 81299572 + 17.2 0.000 Intergenic Intergenic 262352 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chr1-1753 chr1 224726835 224727045 + 17.2 0.000 intron (NR_136287, intron 3 of 4) intron (NR_136287, intron 3 of 4) 110623 NM_152495 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr19-1165 chr19 3429746 3429956 + 17.2 0.000 intron (NM_001245002, intron 3 of 10) L2b|LINE|L2 50674 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr3-1541 chr3 189715102 189715312 + 17.2 0.000 intron (NM_003722, intron 1 of 13) MLT1J2|LTR|ERVL-MaLR -74452 NM_001329150 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr11-604 chr11 64284569 64284779 + 17.2 0.000 promoter-TSS (NM_001177358) promoter-TSS (NM_001177358) -9 NM_032989 572 Hs.370254 NM_004322 ENSG00000002330 BAD BBC2|BCL2L8 BCL2 associated agonist of cell death protein-coding chr3-1362 chr3 14922383 14922593 + 17.2 0.000 exon (NM_001320276, exon 15 of 19) exon (NM_001320276, exon 15 of 19) 25017 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr12-1111 chr12 8026674 8026884 + 17.2 0.000 Intergenic Intergenic -5937 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr11-954 chr11 46026859 46027069 + 17.2 0.000 intron (NR_147890, intron 5 of 18) intron (NR_147890, intron 5 of 18) 93855 NM_001352029 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr16-2709 chr16 86115632 86115842 + 17.2 0.000 Intergenic Intergenic -80444 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr4-2175 chr4 101746778 101746988 + 17.2 0.000 Intergenic Intergenic -43724 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr4-948 chr4 140996944 140997154 + 17.2 0.000 intron (NM_020724, intron 1 of 6) L1ME3Cz|LINE|L1 136420 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr3-1264 chr3 184234343 184234553 + 17.2 0.000 intron (NM_001320373, intron 3 of 16) intron (NM_001320373, intron 3 of 16) 1032 NM_001320373 90113 Hs.584997 NM_138345 ENSG00000145198 VWA5B2 - von Willebrand factor A domain containing 5B2 protein-coding chr11-858 chr11 73393558 73393768 + 17.2 0.000 intron (NM_152222, intron 6 of 10) intron (NM_152222, intron 6 of 10) 16995 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr16-780 chr16 2371495 2371705 + 17.2 0.000 intron (NR_003574, intron 5 of 16) intron (NR_003574, intron 5 of 16) 30678 NR_003574 650655 Hs.376281 NR_003574 ENSG00000238098 ABCA17P ABCA17 ATP binding cassette subfamily A member 17, pseudogene pseudo chr14-820 chr14 101400813 101401023 + 17.2 0.000 Intergenic Intergenic 7004 NR_126006 338002 Hs.124848 NR_126006 ENSG00000259023 LINC00524 C14orf71 long intergenic non-protein coding RNA 524 ncRNA chr13-487 chr13 101838338 101838548 + 17.2 0.000 intron (NM_001321937, intron 3 of 3) intron (NM_001321937, intron 3 of 3) 78202 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr8-998 chr8 131124694 131124904 + 17.2 0.000 Intergenic Intergenic -83890 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr8-1238 chr8 123269076 123269286 + 17.2 0.000 intron (NR_037873, intron 1 of 3) intron (NR_037873, intron 1 of 3) 5105 NM_001204180 100533106 Hs.707401 NM_001204180 ENSG00000259305 ZHX1-C8orf76 - ZHX1-C8orf76 readthrough protein-coding chr20-336 chr20 7392742 7392952 + 17.2 0.000 Intergenic Intergenic 21239 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chr22-868 chr22 38177965 38178175 + 17.2 0.000 intron (NM_001199562, intron 1 of 15) intron (NM_001199562, intron 1 of 15) 3760 NM_003560 8398 Hs.170479 NM_003560 ENSG00000184381 PLA2G6 CaI-PLA2|GVI|INAD1|IPLA2-VIA|NBIA2|NBIA2A|NBIA2B|PARK14|PLA2|PNPLA9|iPLA2|iPLA2beta phospholipase A2 group VI protein-coding chr5-1207 chr5 103272312 103272522 + 17.2 0.000 intron (NM_033211, intron 2 of 2) intron (NM_033211, intron 2 of 2) 12993 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr2-3011 chr2 52934519 52934729 + 17.2 0.000 Intergenic Intergenic -232009 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr8-282 chr8 23019242 23019452 + 17.2 0.000 TTS (NM_003842) TTS (NM_003842) 19768 NM_015178 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr11-1048 chr11 45847960 45848170 + 17.2 0.000 intron (NM_021117, intron 1 of 11) intron (NM_021117, intron 1 of 11) 590 NM_021117 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr1-2136 chr1 586091 586301 + 17.2 0.000 Intergenic Intergenic 42813 NR_125957 101928626 Hs.637667 NR_125957 ENSG00000230021 LOC101928626 - uncharacterized LOC101928626 ncRNA chr2-4159 chr2 177799646 177799856 + 17.2 0.000 intron (NM_001077197, intron 10 of 20) L1M6|LINE|L1 89005 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr21-314 chr21 25329318 25329528 + 17.2 0.000 Intergenic Intergenic 102278 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA chr5-1187 chr5 61052912 61053122 + 17.2 0.000 intron (NM_174889, intron 1 of 3) MLT1J1|LTR|ERVL-MaLR 107812 NM_174889 91942 Hs.591757 NM_174889 ENSG00000164182 NDUFAF2 B17.2L|MC1DN10|MMTN|NDUFA12L|mimitin NADH:ubiquinone oxidoreductase complex assembly factor 2 protein-coding chr8-639 chr8 54337385 54337595 + 17.2 0.000 Intergenic Intergenic 6804 NR_004385 26766 NR_004385 ENSG00000199212 RNU105C E1-5|E1-6 RNA, U105C small nucleolar snoRNA chr4-969 chr4 52196070 52196280 + 17.2 0.000 Intergenic Intergenic 144871 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr1-940 chr1 246506733 246506943 + 17.2 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 441 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr3-1559 chr3 15557716 15557926 + 17.2 0.000 Intergenic Intergenic -36115 NM_080539 8292 Hs.146735 NM_005677 ENSG00000206561 COLQ CMS5|EAD collagen like tail subunit of asymmetric acetylcholinesterase protein-coding chr13-685 chr13 26280386 26280596 + 17.2 0.000 intron (NM_001318368, intron 1 of 12) L1M5|LINE|L1 26362 NM_001346501 1024 Hs.382306 NM_001260 ENSG00000132964 CDK8 K35 cyclin dependent kinase 8 protein-coding chrX-229 chrX 107766913 107767123 + 17.2 0.000 intron (NM_198057, intron 1 of 2) intron (NM_198057, intron 1 of 2) 8769 NM_198057 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr12-822 chr12 26153706 26153916 + 17.2 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -28774 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr16-954 chr16 85879035 85879245 + 17.2 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -20022 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr2-847 chr2 20208552 20208762 + 17.2 0.000 intron (NM_001006946, intron 2 of 5) intron (NM_001006946, intron 2 of 5) 16473 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr11-2003 chr11 47124924 47125134 + 17.2 0.000 intron (NM_001003677, intron 3 of 8) intron (NM_001003677, intron 3 of 8) 51850 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr2-1633 chr2 8633847 8634057 + 17.2 0.000 Intergenic Intergenic 47909 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr17-1293 chr17 39663729 39663939 + 17.2 0.000 3' UTR (NM_001165937, exon 15 of 15) 3' UTR (NM_001165937, exon 15 of 15) -1512 NM_003673 8557 Hs.77628 NM_003673 ENSG00000173991 TCAP CMD1N|CMH25|LGMD2G|LGMDR7|T-cap|TELE|telethonin titin-cap protein-coding chr8-930 chr8 31184792 31185002 + 17.2 0.000 Intergenic MamRep605|LTR?|LTR? -151541 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr1-2991 chr1 201309239 201309449 + 17.2 0.000 intron (NM_001005337, intron 2 of 13) intron (NM_001005337, intron 2 of 13) 25838 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr7-1408 chr7 23181695 23181905 + 17.2 0.000 promoter-TSS (NM_007342) promoter-TSS (NM_007342) -248 NM_007342 11097 Hs.408241 NM_007342 ENSG00000136243 NUP42 CG1|NLP-1|NLP_1|NUPL2|hCG1 nucleoporin 42 protein-coding chr19-1590 chr19 11152632 11152842 + 17.2 0.000 intron (NM_001317033, intron 1 of 4) intron (NM_001317033, intron 1 of 4) 3045 NM_001317033 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr14-529 chr14 76773620 76773830 + 17.2 0.000 intron (NM_014909, intron 4 of 6) intron (NM_014909, intron 4 of 6) 12257 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr7-1884 chr7 108626897 108627107 + 17.2 0.000 Intergenic HUERS-P1-int|LTR|ERV1 57128 NM_012328 4189 Hs.732494 NM_012328 ENSG00000128590 DNAJB9 ERdj4|MDG-1|MDG1|MST049|MSTP049 DnaJ heat shock protein family (Hsp40) member B9 protein-coding chr8-731 chr8 128127835 128128045 + 17.2 0.000 Intergenic Intergenic -22176 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr7-511 chr7 73667649 73667859 + 17.2 0.000 promoter-TSS (NM_001077621) promoter-TSS (NM_001077621) -77 NM_001077621 155382 Hs.647037 NM_152560 ENSG00000176428 VPS37D WBSCR24 VPS37D subunit of ESCRT-I protein-coding chr3-1465 chr3 58179848 58180058 + 17.2 0.000 Intergenic Intergenic -9318 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr4-664 chr4 19936528 19936738 + 17.2 0.000 Intergenic Intergenic -315272 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr2-1484 chr2 152334907 152335117 + 17.2 0.000 promoter-TSS (NM_052905) promoter-TSS (NM_052905) -162 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr7-803 chr7 87220278 87220488 + 17.2 0.000 promoter-TSS (NM_024315) promoter-TSS (NM_024315) -31 NM_001329475 79161 Hs.619593 NM_024315 ENSG00000135185 TMEM243 C7orf23|MM-TRAG|MMTRAG transmembrane protein 243 protein-coding chr18-379 chr18 41378792 41379002 + 17.2 0.000 Intergenic Intergenic 141780 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr5-773 chr5 78529539 78529749 + 17.2 0.000 intron (NM_005779, intron 3 of 4) AluYb8|SINE|Alu 119128 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr19-1353 chr19 46068651 46068861 + 17.2 0.000 intron (NR_163177, intron 1 of 5) intron (NR_163177, intron 1 of 5) 8873 NR_163176 444882 Hs.531310 NM_001002923 ENSG00000204869 IGFL4 - IGF like family member 4 protein-coding chr2-2865 chr2 170565600 170565810 + 17.2 0.000 intron (NM_001083615, intron 31 of 33) intron (NM_001083615, intron 31 of 33) 148862 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr5-1883 chr5 149930388 149930598 + 17.2 0.000 TTS (NR_110534) TTS (NR_110534) 2484 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr20-988 chr20 53547755 53547965 + 17.2 0.000 Intergenic Intergenic -4910 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr2-3565 chr2 33788124 33788334 + 17.2 0.000 intron (NR_126403, intron 1 of 5) ERVL-E-int|LTR|ERVL -60012 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr20-476 chr20 4038151 4038361 + 17.2 0.000 Intergenic Intergenic -22698 NM_001134337 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr17-970 chr17 82298282 82298492 + 17.2 0.000 Intergenic Intergenic -5573 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr14-678 chr14 74804319 74804529 + 17.2 0.000 intron (NM_019589, intron 6 of 20) L2c|LINE|L2 41108 NM_019589 56252 Hs.531111 NM_019589 ENSG00000119596 YLPM1 C14orf170|PPP1R169|ZAP113|ZAP3 YLP motif containing 1 protein-coding chr17-1916 chr17 75069946 75070156 + 17.2 0.000 Intergenic Intergenic -17714 NM_001271765 9121 Hs.592095 NM_004695 ENSG00000170190 SLC16A5 MCT5|MCT6 solute carrier family 16 member 5 protein-coding chr1-1244 chr1 151416501 151416711 + 17.2 0.000 intron (NM_001194938, intron 9 of 17) intron (NM_001194938, intron 9 of 17) 17033 NM_002796 5692 Hs.89545 NM_002796 ENSG00000159377 PSMB4 HN3|HsN3|PRAAS3|PROS-26|PROS26 proteasome subunit beta 4 protein-coding chr12-1492 chr12 26989403 26989613 + 17.2 0.000 intron (NM_016551, intron 6 of 11) Tigger2|DNA|TcMar-Tigger 24876 NM_016551 51768 Hs.438641 NM_016551 ENSG00000064115 TM7SF3 - transmembrane 7 superfamily member 3 protein-coding chr8-741 chr8 27948506 27948716 + 17.2 0.000 intron (NM_173833, intron 3 of 8) intron (NM_173833, intron 3 of 8) 44062 NM_173833 286133 Hs.591833 NM_173833 ENSG00000168079 SCARA5 NET33|Tesr scavenger receptor class A member 5 protein-coding chrX-106 chrX 55717512 55717722 + 17.2 0.000 promoter-TSS (NR_148685) promoter-TSS (NR_148685) -132 NM_006064 10325 Hs.50282 NM_006064 ENSG00000083750 RRAGB RAGB|bA465E19.1 Ras related GTP binding B protein-coding chr6-685 chr6 170553218 170553428 + 17.2 0.000 promoter-TSS (NM_002793) promoter-TSS (NM_002793) -16 NM_002793 5689 Hs.352768 NM_002793 ENSG00000008018 PSMB1 HC5|PMSB1|PSC5 proteasome subunit beta 1 protein-coding chr19-879 chr19 43504003 43504213 + 17.2 0.000 exon (NM_198850, exon 2 of 16) exon (NM_198850, exon 2 of 16) 725 NM_198850 653583 Hs.631581 NM_198850 ENSG00000176531 PHLDB3 - pleckstrin homology like domain family B member 3 protein-coding chr2-1148 chr2 101230669 101230879 + 17.2 0.000 Intergenic Intergenic -22112 NM_017546 55571 Hs.744080 NM_017546 ENSG00000158435 CNOT11 C2orf29|C40 CCR4-NOT transcription complex subunit 11 protein-coding chr7-992 chr7 95545055 95545265 + 17.2 0.000 Intergenic Intergenic 51356 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase 4 protein-coding chr15-467 chr15 61205507 61205717 + 17.2 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 23690 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr4-782 chr4 172982237 172982447 + 17.2 0.000 intron (NM_001034845, intron 10 of 12) intron (NM_001034845, intron 10 of 12) -186469 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr3-1498 chr3 125165219 125165429 + 17.2 0.000 intron (NM_001195483, intron 4 of 12) intron (NM_001195483, intron 4 of 12) -13772 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr8-783 chr8 66113149 66113359 + 17.2 0.000 Intergenic CpG -13875 NM_184087 84675 Hs.85524 NM_033058 ENSG00000147573 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding chr5-658 chr5 36374358 36374568 + 17.2 0.000 Intergenic Intergenic -72561 NM_001323273 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr9-2908 chr9 134101937 134102147 + 17.2 0.000 Intergenic Intergenic -34016 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr20-673 chr20 33812395 33812605 + 17.2 0.000 intron (NM_176812, intron 1 of 4) intron (NM_176812, intron 1 of 4) 1152 NM_176812 128866 Hs.472471 NM_176812 ENSG00000101421 CHMP4B C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4 charged multivesicular body protein 4B protein-coding chr10-941 chr10 21373060 21373270 + 17.2 0.000 promoter-TSS (NR_155751) promoter-TSS (NR_155751) -215 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr2-1770 chr2 187215829 187216039 + 17.2 0.000 Intergenic Intergenic 232318 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr9-1509 chr9 37592538 37592748 + 17.2 0.000 promoter-TSS (NM_001134484) promoter-TSS (NM_001134484) -4 NM_001134485 401505 Hs.130774 NM_001001790 ENSG00000175768 TOMM5 C9orf105|Tom5|bA613M10.3 translocase of outer mitochondrial membrane 5 protein-coding chr12-1423 chr12 53862934 53863144 + 17.2 0.000 Intergenic Intergenic -75792 NM_017410 3229 Hs.118608 NM_017410 ENSG00000123364 HOXC13 ECTD9|HOX3|HOX3G homeobox C13 protein-coding chr11-1727 chr11 96343312 96343522 + 17.2 0.000 promoter-TSS (NM_032427) promoter-TSS (NM_032427) -222 NM_032427 84441 Hs.428214 NM_032427 ENSG00000184384 MAML2 MAM-3|MAM2|MAM3|MLL-MAML2 mastermind like transcriptional coactivator 2 protein-coding chr1-957 chr1 151611932 151612142 + 17.2 0.000 promoter-TSS (NM_001330723) promoter-TSS (NM_001330723) -13 NM_001330723 81609 Hs.192326 NM_030918 ENSG00000143376 SNX27 MRT1|MY014 sorting nexin 27 protein-coding chr6-785 chr6 113994847 113995057 + 17.2 0.000 intron (NR_125845, intron 3 of 9) intron (NR_125845, intron 3 of 9) -23804 NM_001527 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr17-1001 chr17 76841577 76841787 + 17.2 0.000 Intergenic Intergenic -14484 NR_135283 283994 Hs.645372 NR_135283 ENSG00000267535 LINC00868 C17orf52 long intergenic non-protein coding RNA 868 ncRNA chr17-1548 chr17 843466 843676 + 17.2 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 20540 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr17-2031 chr17 28111597 28111807 + 17.2 0.000 intron (NM_016231, intron 1 of 10) L1M4a1|LINE|L1 69025 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr5-1451 chr5 39219578 39219788 + 17.2 0.000 promoter-TSS (NM_001349333) promoter-TSS (NM_001349333) -120 NM_199335 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr17-700 chr17 13602078 13602288 + 17.2 0.000 promoter-TSS (NM_006042) promoter-TSS (NM_006042) -254 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr10-1223 chr10 35959336 35959546 + 17.2 0.000 Intergenic Intergenic 181139 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr1-1703 chr1 1532954 1533164 + 17.2 0.000 intron (NM_001170536, intron 15 of 15) intron (NM_001170536, intron 15 of 15) 7565 NM_001114748 339453 Hs.668654 NM_001114748 ENSG00000205090 TMEM240 C1orf70|SCA21 transmembrane protein 240 protein-coding chr2-1407 chr2 101827303 101827513 + 17.2 0.000 intron (NM_145686, intron 5 of 30) intron (NM_145686, intron 5 of 30) 129701 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chrX-138 chrX 104112603 104112813 + 17.2 0.000 non-coding (NR_026694, exon 1 of 4) non-coding (NR_026694, exon 1 of 4) 185 NR_026694 644353 Hs.648338 NM_001143978 ENSG00000166707 ZCCHC18 PNMA7B|SIZN2 zinc finger CCHC-type containing 18 protein-coding chr13-1252 chr13 102286410 102286620 + 17.2 0.000 intron (NM_001321940, intron 1 of 5) intron (NM_001321940, intron 1 of 5) 24171 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr15-748 chr15 47384404 47384614 + 17.2 0.000 intron (NM_001198999, intron 1 of 19) intron (NM_001198999, intron 1 of 19) 200420 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr4-1211 chr4 122584598 122584808 + 17.2 0.000 Intergenic Intergenic -34280 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr7-1218 chr7 99580483 99580693 + 17.2 0.000 Intergenic Intergenic -17679 NM_001195542 100289187 Hs.729333 NM_001195541 ENSG00000244219 TMEM225B GS1-259H13.2 transmembrane protein 225B protein-coding chr2-2567 chr2 223072702 223072912 + 17.2 0.000 Intergenic Intergenic 20877 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr7-2246 chr7 149180843 149181053 + 17.2 0.000 3' UTR (NM_020781, exon 7 of 7) 3' UTR (NM_020781, exon 7 of 7) -14598 NM_003575 8427 Hs.729056 NM_003575 ENSG00000170265 ZNF282 HUB1 zinc finger protein 282 protein-coding chr1-2051 chr1 1555914 1556124 + 17.2 0.000 intron (NM_014188, intron 2 of 4) AluSx|SINE|Alu -15395 NM_001114748 339453 Hs.668654 NM_001114748 ENSG00000205090 TMEM240 C1orf70|SCA21 transmembrane protein 240 protein-coding chr9-955 chr9 79489554 79489764 + 17.2 0.000 Intergenic Intergenic -82114 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr15-583 chr15 64894069 64894279 + 17.2 0.000 Intergenic Intergenic -17728 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr11-1181 chr11 67955605 67955815 + 17.2 0.000 Intergenic CpG 48387 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr12-595 chr12 104303656 104303866 + 17.2 0.000 promoter-TSS (NM_001008394) promoter-TSS (NM_001008394) 22 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr15-626 chr15 64620439 64620649 + 17.2 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 82737 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr2-3930 chr2 57907683 57907893 + 17.2 0.000 5' UTR (NM_001288837, exon 1 of 16) 5' UTR (NM_001288837, exon 1 of 16) 137 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr5-2557 chr5 178250099 178250309 + 17.2 0.000 intron (NM_173465, intron 17 of 28) intron (NM_173465, intron 17 of 28) -17382 NM_001278346 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr6-1734 chr6 42073747 42073957 + 17.2 0.000 intron (NM_138572, intron 7 of 8) L2a|LINE|L2 23328 NM_138572 129685 Hs.520122 NM_138572 ENSG00000137413 TAF8 II|TAF|TAF(II)43|TAFII-43|TAFII43|TBN TATA-box binding protein associated factor 8 protein-coding chr20-593 chr20 36162799 36163009 + 17.2 0.000 intron (NM_012156, intron 1 of 21) intron (NM_012156, intron 1 of 21) -7144 NR_147703 100130373 Hs.570339 NR_147703 LOC100130373 - uncharacterized LOC100130373 ncRNA chr5-1854 chr5 136766378 136766588 + 17.2 0.000 Intergenic Intergenic -361714 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr13-360 chr13 33918615 33918825 + 17.2 0.000 intron (NM_181558, intron 8 of 8) intron (NM_181558, intron 8 of 8) 100571 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr4-451 chr4 99894307 99894517 + 17.2 0.000 promoter-TSS (NM_021970) promoter-TSS (NM_021970) 15 NM_021970 8649 Hs.433332 NM_021970 ENSG00000109270 LAMTOR3 MAP2K1IP1|MAPBP|MAPKSP1|MP1|PRO0633|Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding chr4-349 chr4 3532429 3532639 + 17.2 0.000 promoter-TSS (NR_110005) promoter-TSS (NR_110005) -112 NM_002337 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr5-938 chr5 38509316 38509526 + 17.2 0.000 intron (NM_001127671, intron 7 of 19) Chap1_Mam|DNA|hAT-Charlie 47225 NM_001127671 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS LIF receptor subunit alpha protein-coding chr6-2067 chr6 116513620 116513830 + 17.2 0.000 intron (NM_153711, intron 1 of 1) intron (NM_153711, intron 1 of 1) 2086 NM_153711 254228 Hs.105081 NM_153711 ENSG00000178033 CALHM5 C6orf188|FAM26E|dJ493F7.3 calcium homeostasis modulator family member 5 protein-coding chr2-2510 chr2 168211064 168211274 + 17.2 0.000 intron (NM_013233, intron 1 of 17) intron (NM_013233, intron 1 of 17) 36426 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr3-948 chr3 183253582 183253792 + 17.2 0.000 intron (NM_032047, intron 1 of 1) CpG 434 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr4-805 chr4 76624313 76624523 + 17.2 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 48867 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr20-621 chr20 23642505 23642715 + 17.2 0.000 Intergenic Intergenic -4655 NM_001288614 1471 Hs.304682 NM_000099 ENSG00000101439 CST3 ARMD11|HEL-S-2 cystatin C protein-coding chr22-595 chr22 30302022 30302232 + 17.2 0.000 intron (NM_031937, intron 2 of 8) MIRc|SINE|MIR -12500 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 CASTOR1 GATSL3 cytosolic arginine sensor for mTORC1 subunit 1 protein-coding chr19-1038 chr19 16584326 16584536 + 17.2 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) -12016 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr11-2076 chr11 84855876 84856086 + 17.2 0.000 intron (NM_001351274, intron 5 of 26) L3|LINE|CR1 67440 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-706 chr12 57088614 57088824 + 17.2 0.000 promoter-TSS (NM_001330305) promoter-TSS (NM_001330305) -395 NM_001330305 4665 Hs.159223 NM_005967 ENSG00000166886 NAB2 MADER NGFI-A binding protein 2 protein-coding chr5-1546 chr5 39399694 39399904 + 17.2 0.000 intron (NM_001343, intron 1 of 14) intron (NM_001343, intron 1 of 14) 25181 NM_001343 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB adaptor protein 2 protein-coding chr15-475 chr15 89828531 89828741 + 17.2 0.000 Intergenic Intergenic -13784 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr19-955 chr19 6272411 6272621 + 17.2 0.000 intron (NM_005934, intron 1 of 11) L2c|LINE|L2 7459 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr8-544 chr8 143975846 143976056 + 17.2 0.000 intron (NM_000445, intron 1 of 32) CpG-27770 794 NM_000445 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr16-367 chr16 84930730 84930940 + 17.2 0.000 Intergenic (GTGTGG)n|Simple_repeat|Simple_repeat 80700 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr10-1015 chr10 23368344 23368554 + 17.2 0.000 Intergenic Intergenic -23652 NM_001351306 256815 Hs.132442 NM_153714 ENSG00000179133 C10orf67 C10orf115|LINC01552 chromosome 10 open reading frame 67 protein-coding chr4-1103 chr4 4763341 4763551 + 17.2 0.000 intron (NR_125892, intron 1 of 2) intron (NR_125892, intron 1 of 2) 1686 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr19-555 chr19 38229717 38229927 + 17.2 0.000 promoter-TSS (NM_001363579) promoter-TSS (NM_001363579) -108 NM_001135156 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr19-1068 chr19 51339690 51339900 + 17.2 0.000 intron (NM_001163922, intron 4 of 9) intron (NM_001163922, intron 4 of 9) 2329 NM_001163922 147645 Hs.293236 NM_001163922 ENSG00000186806 VSIG10L - V-set and immunoglobulin domain containing 10 like protein-coding chr6-996 chr6 12958289 12958499 + 17.2 0.000 intron (NM_001322313, intron 1 of 12) intron (NM_001322313, intron 1 of 12) 908 NM_001322313 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr11-1535 chr11 2077525 2077735 + 17.2 0.000 Intergenic L1ME2|LINE|L1 56579 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr2-2223 chr2 157692851 157693061 + 17.2 0.000 Intergenic Intergenic -64092 NM_145259 130399 Hs.562901 NM_145259 ENSG00000123612 ACVR1C ACVRLK7|ALK7 activin A receptor type 1C protein-coding chr1-3517 chr1 179059107 179059317 + 17.2 0.000 intron (NM_001324310, intron 4 of 7) intron (NM_001324310, intron 4 of 7) -22858 NM_022371 64222 Hs.584957 NM_022371 ENSG00000186283 TOR3A ADIR|ADIR2 torsin family 3 member A protein-coding chr13-899 chr13 44148588 44148798 + 17.2 0.000 promoter-TSS (NR_132368) promoter-TSS (NR_132368) -958 NR_132368 105370183 Hs.652552 NR_132368 LINC00390 - long intergenic non-protein coding RNA 390 ncRNA chr18-209 chr18 25650485 25650695 + 17.2 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -298424 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr5-1622 chr5 112385479 112385689 + 17.2 0.000 intron (NM_001347887, intron 1 of 23) intron (NM_001347887, intron 1 of 23) 33693 NM_022140 64097 Hs.584954 NM_022140 ENSG00000129595 EPB41L4A EPB41L4|NBL4 erythrocyte membrane protein band 4.1 like 4A protein-coding chr3-3469 chr3 172097164 172097374 + 17.2 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 56738 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr17-948 chr17 21215024 21215234 + 17.2 0.000 promoter-TSS (NR_024547) promoter-TSS (NR_024547) -534 NM_003876 8834 Hs.592945 NM_003876 ENSG00000178307 TMEM11 C17orf35|PM1|PMI transmembrane protein 11 protein-coding chr20-404 chr20 3681911 3682121 + 17.2 0.000 5' UTR (NM_001282447, exon 1 of 22) 5' UTR (NM_001282447, exon 1 of 22) 674 NM_001282447 80332 Hs.173716 NM_025220 ENSG00000149451 ADAM33 C20orf153|DJ964F7.1 ADAM metallopeptidase domain 33 protein-coding chr1-1210 chr1 203197807 203198017 + 17.2 0.000 Intergenic MIRb|SINE|MIR -11208 NM_001276 1116 Hs.382202 NM_001276 ENSG00000133048 CHI3L1 ASRT7|CGP-39|GP-39|GP39|HC-gp39|HCGP-3P|YK-40|YKL-40|YKL40|YYL-40|hCGP-39 chitinase 3 like 1 protein-coding chr4-357 chr4 102760932 102761142 + 17.2 0.000 promoter-TSS (NM_005908) promoter-TSS (NM_005908) -69 NM_005908 4126 Hs.480415 NM_005908 ENSG00000109323 MANBA MANB1 mannosidase beta protein-coding chr22-730 chr22 37806476 37806686 + 17.2 0.000 3' UTR (NM_005318, exon 1 of 1) 3' UTR (NM_005318, exon 1 of 1) -1324 NM_014291 23464 Hs.54609 NM_014291 ENSG00000100116 GCAT KBL glycine C-acetyltransferase protein-coding chr17-1303 chr17 55159360 55159570 + 17.2 0.000 intron (NM_178509, intron 17 of 17) L2c|LINE|L2 -105495 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr3-665 chr3 170223185 170223395 + 17.2 0.000 intron (NM_002740, intron 1 of 17) intron (NM_002740, intron 1 of 17) 866 NM_002740 5584 Hs.478199 NM_002740 ENSG00000163558 PRKCI DXS1179E|PKCI|nPKC-iota protein kinase C iota protein-coding chr16-1812 chr16 30693894 30694104 + 17.2 0.000 Intergenic Intergenic 4472 NM_001256932 730183 Hs.535456 NM_001256932 ENSG00000261840 LOC730183 - uncharacterized LOC730183 protein-coding chr7-1248 chr7 7221724 7221934 + 17.2 0.000 intron (NM_020156, intron 1 of 3) LTR16A2|LTR|ERVL -33325 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr9-1115 chr9 76215130 76215340 + 17.2 0.000 intron (NM_001190482, intron 20 of 36) intron (NM_001190482, intron 20 of 36) 179191 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr9-1441 chr9 134472345 134472555 + 17.2 0.000 Intergenic Intergenic 65890 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr9-2594 chr9 137685620 137685830 + 17.2 0.000 intron (NM_001354612, intron 1 of 8) L1MB4|LINE|L1 66720 NM_001354611 79813 Hs.495511 NM_024757 ENSG00000181090 EHMT1 EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D euchromatic histone lysine methyltransferase 1 protein-coding chr4-575 chr4 8472860 8473070 + 17.2 0.000 intron (NM_152544, intron 10 of 10) intron (NM_152544, intron 10 of 10) 32168 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr7-1717 chr7 2702813 2703023 + 17.2 0.000 intron (NM_133463, intron 3 of 6) intron (NM_133463, intron 3 of 6) 14716 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr11-1445 chr11 72041648 72041858 + 17.2 0.000 intron (NR_104476, intron 2 of 24) intron (NR_104476, intron 2 of 24) 27462 NR_104178 100128494 Hs.713607 NR_104178 ENSG00000251143 LOC100128494 - uncharacterized LOC100128494 ncRNA chr3-1757 chr3 185734038 185734248 + 17.2 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) 20891 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr12-718 chr12 6689539 6689749 + 17.2 0.000 promoter-TSS (NM_001039920) promoter-TSS (NM_001039920) -72 NM_001135734 171017 Hs.103315 NM_133476 ENSG00000126746 ZNF384 CAGH1|CAGH1A|CIZ|ERDA2|NMP4|NP|TNRC1 zinc finger protein 384 protein-coding chr7-866 chr7 79779042 79779252 + 17.2 0.000 Intergenic Intergenic 325187 NR_038343 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr2-1269 chr2 55364228 55364438 + 17.2 0.000 intron (NM_001254943, intron 5 of 33) MIR1_Amn|SINE|MIR 55523 NM_018084 55704 Hs.292925 NM_018084 ENSG00000115355 CCDC88A APE|GIRDIN|GIV|GRDN|HkRP1|KIAA1212|PEHO|PEHOL coiled-coil domain containing 88A protein-coding chr13-800 chr13 107459547 107459757 + 17.2 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 71596 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA chr3-1223 chr3 101179693 101179903 + 17.2 0.000 Intergenic Intergenic 140777 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr10-344 chr10 1056487 1056697 + 17.2 0.000 non-coding (NR_134300, exon 1 of 4) non-coding (NR_134300, exon 1 of 4) 112 NR_134300 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chrX-319 chrX 63250247 63250457 + 17.2 0.000 Intergenic Intergenic 100980 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr6-270 chr6 42746163 42746373 + 17.2 0.000 promoter-TSS (NM_003192) promoter-TSS (NM_003192) -165 NM_003192 6903 Hs.75064 NM_003192 ENSG00000124659 TBCC CFC tubulin folding cofactor C protein-coding chr3-2983 chr3 83726333 83726543 + 17.2 0.000 Intergenic MER52-int|LTR|ERV1 1143137 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr1-1520 chr1 41773450 41773660 + 17.2 0.000 intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 145367 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr1-1410 chr1 248906257 248906467 + 17.2 0.000 intron (NM_170725, intron 1 of 2) CpG 119 NM_001017434 267002 Hs.602037 NM_170725 ENSG00000185220 PGBD2 - piggyBac transposable element derived 2 protein-coding chr17-1356 chr17 59786417 59786627 + 17.2 0.000 intron (NM_001329400, intron 5 of 9) intron (NM_001329400, intron 5 of 9) -54744 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr6-1096 chr6 81450293 81450503 + 17.2 0.000 Intergenic Intergenic 302283 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr3-1356 chr3 188627750 188627960 + 17.2 0.000 intron (NM_005578, intron 6 of 10) L1PA15|LINE|L1 -59189 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr9-758 chr9 93133649 93133859 + 17.2 0.000 intron (NM_004148, intron 1 of 3) CpG 497 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr15-397 chr15 65435848 65436058 + 17.2 0.000 Intergenic Intergenic -13006 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr14-1160 chr14 51024015 51024225 + 17.2 0.000 intron (NM_015163, intron 2 of 9) intron (NM_015163, intron 2 of 9) 71584 NM_015163 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr7-2402 chr7 55439579 55439789 + 17.2 0.000 Intergenic L2a|LINE|L2 74236 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr13-681 chr13 23448021 23448231 + 17.2 0.000 Intergenic Intergenic -14424 NM_014363 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr8-2073 chr8 125110925 125111135 + 17.2 0.000 intron (NM_001349486, intron 3 of 7) intron (NM_001349486, intron 3 of 7) 19170 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding chr10-692 chr10 42866778 42866988 + 17.2 0.000 Intergenic CpG -4638 NR_134479 101929445 Hs.376403 NR_134479 ENSG00000234944 LINC02623 - long intergenic non-protein coding RNA 2623 ncRNA chr8-773 chr8 29185587 29185797 + 17.2 0.000 intron (NM_015254, intron 6 of 39) L3|LINE|CR1 77378 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr17-777 chr17 64263348 64263558 + 17.2 0.000 promoter-TSS (NM_001288732) promoter-TSS (NM_001288732) -193 NM_018469 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr1-2249 chr1 183609479 183609689 + 17.2 0.000 Intergenic Intergenic -18670 NM_001127651 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr13-540 chr13 79936815 79937025 + 17.2 0.000 Intergenic Intergenic 64334 NR_120413 101927195 Hs.342412 NR_120413 ENSG00000229175 LINC00382 TCONS_00021500 long intergenic non-protein coding RNA 382 ncRNA chr1-2041 chr1 212667440 212667650 + 17.2 0.000 Intergenic Intergenic 32295 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr1-4938 chr1 47539235 47539445 + 17.2 0.000 Intergenic MIR|SINE|MIR -102023 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr2-1334 chr2 118865195 118865405 + 17.2 0.000 Intergenic Intergenic -17117 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr19-832 chr19 11381346 11381556 + 17.2 0.000 intron (NR_033663, intron 4 of 7) CpG-13730 2863 NM_000121 2057 Hs.631624 NM_000121 ENSG00000187266 EPOR EPO-R erythropoietin receptor protein-coding chr7-1946 chr7 75565021 75565231 + 17.2 0.000 intron (NM_005338, intron 9 of 30) intron (NM_005338, intron 9 of 30) -37003 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr11-988 chr11 110093147 110093357 + 17.2 0.000 promoter-TSS (NM_033390) promoter-TSS (NM_033390) -140 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr14-738 chr14 38342871 38343081 + 17.2 0.000 Intergenic L1MA2|LINE|L1 -86883 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr11-2248 chr11 86980167 86980377 + 17.2 0.000 intron (NR_038905, intron 2 of 2) X6A_LINE|LINE|CR1 24651 NR_038905 100506368 Hs.559920 NR_038905 ENSG00000246523 FZD4-DT - FZD4 divergent transcript ncRNA chr12-603 chr12 49428948 49429158 + 17.2 0.000 intron (NM_001293285, intron 3 of 14) intron (NM_001293285, intron 3 of 14) 39879 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr17-759 chr17 83087698 83087908 + 17.2 0.000 intron (NM_001004431, intron 2 of 3) intron (NM_001004431, intron 2 of 3) 6657 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr2-1687 chr2 127771113 127771323 + 17.2 0.000 intron (NM_001006622, intron 1 of 5) Tigger3a|DNA|TcMar-Tigger 39953 NM_001006623 55339 Hs.554831 NM_018383 ENSG00000136709 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding chr14-1026 chr14 55366475 55366685 + 17.2 0.000 3' UTR (NM_014924, exon 10 of 10) 3' UTR (NM_014924, exon 10 of 10) 45278 NM_014924 22863 Hs.414809 NM_014924 ENSG00000126775 ATG14 ATG14L|BARKOR|KIAA0831 autophagy related 14 protein-coding chr1-1455 chr1 9196262 9196472 + 17.2 0.000 Intergenic Intergenic -14029 NR_132742 106614088 Hs.551837 NR_132742 ENSG00000228526 MIR34AHG - MIR34A host gene ncRNA chr6-1098 chr6 83215272 83215482 + 17.2 0.000 intron (NM_002395, intron 13 of 13) MER20|DNA|hAT-Charlie -21477 NM_001199917 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr22-460 chr22 18048579 18048789 + 17.2 0.000 Intergenic CpG 19299 NR_024417 100192420 Hs.589947 NR_024417 ENSG00000235295 LINC01634 - long intergenic non-protein coding RNA 1634 ncRNA chr6-2025 chr6 44411830 44412040 + 17.2 0.000 intron (NM_001253, intron 8 of 15) intron (NM_001253, intron 8 of 15) -23706 NR_039785 100616352 NR_039785 ENSG00000266619 MIR4642 - microRNA 4642 ncRNA chr5-1388 chr5 125485192 125485402 + 17.2 0.000 Intergenic Intergenic -7964 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr3-1188 chr3 8458759 8458969 + 17.2 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 42794 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr6-909 chr6 147100589 147100799 + 17.2 0.000 intron (NR_034115, intron 4 of 10) HAL1b|LINE|L1 -58231 NR_132442 106182249 Hs.575390 NR_132442 ENSG00000196634 LUADT1 - lung adenocarcinoma associated transcript 1 ncRNA chr4-1917 chr4 55347717 55347927 + 17.2 0.000 intron (NM_024592, intron 1 of 4) intron (NM_024592, intron 1 of 4) 1580 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding chr6-1650 chr6 140736351 140736561 + 17.2 0.000 Intergenic Intergenic 52642 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr2-1645 chr2 30979970 30980180 + 17.2 0.000 intron (NM_001253826, intron 3 of 15) intron (NM_001253826, intron 3 of 15) 149565 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr17-1582 chr17 44132310 44132520 + 17.2 0.000 Intergenic MIR3|SINE|MIR -8774 NM_005474 10014 Hs.438782 NM_005474 ENSG00000108840 HDAC5 HD5|NY-CO-9 histone deacetylase 5 protein-coding chr1-2458 chr1 61076905 61077115 + 17.2 0.000 promoter-TSS (NM_001145511) promoter-TSS (NM_001145511) -217 NM_001145511 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr12-611 chr12 79691175 79691385 + 17.2 0.000 promoter-TSS (NM_002583) promoter-TSS (NM_002583) -183 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr10-915 chr10 91298502 91298712 + 17.2 0.000 Intergenic Intergenic 77944 NM_032373 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr1-1086 chr1 33349946 33350156 + 17.2 0.000 promoter-TSS (NR_125978) promoter-TSS (NR_125978) -152 NM_004427 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr22-869 chr22 38270029 38270239 + 17.2 0.000 intron (NM_001195072, intron 1 of 9) intron (NM_001195072, intron 1 of 9) 2530 NM_001195071 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr11-2181 chr11 8721611 8721821 + 17.2 0.000 intron (NM_005418, intron 7 of 22) intron (NM_005418, intron 7 of 22) 36277 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr10-1510 chr10 27483200 27483410 + 17.2 0.000 Intergenic Intergenic -20869 NM_001256412 22931 Hs.406799 NM_021252 ENSG00000099246 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding chr1-3267 chr1 218665317 218665527 + 17.2 0.000 intron (NR_031644, intron 3 of 6) intron (NR_031644, intron 3 of 6) 155327 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr6-893 chr6 115643792 115644002 + 17.2 0.000 promoter-TSS (NR_134602) promoter-TSS (NR_134602) -62 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chrX-139 chrX 154019952 154020162 + 17.2 0.000 promoter-TSS (NM_001025243) promoter-TSS (NM_001025243) -68 NR_031757 100313781 NR_031757 ENSG00000284286 MIR718 hsa-mir-718 microRNA 718 ncRNA chr4-2120 chr4 61926854 61927064 + 17.2 0.000 intron (NM_001322246, intron 12 of 25) intron (NM_001322246, intron 12 of 25) 234806 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr14-606 chr14 52250198 52250408 + 17.2 0.000 Intergenic Intergenic -17395 NM_000953 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr3-1642 chr3 115401392 115401602 + 17.1 0.000 Intergenic MER50B|LTR|ERV1 -222013 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr9-1099 chr9 133935615 133935825 + 17.1 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 56604 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr2-1255 chr2 20584284 20584494 + 17.1 0.000 Intergenic Intergenic 8159 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr4-480 chr4 55395463 55395673 + 17.1 0.000 promoter-TSS (NM_018475) promoter-TSS (NM_018475) -389 NM_018475 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr3-2338 chr3 139173572 139173782 + 17.1 0.000 Intergenic Intergenic 59845 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 PISRT1 lncRNA ncRNA chr6-638 chr6 104625682 104625892 + 17.1 0.000 Intergenic Intergenic 233759 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr10-2241 chr10 91190514 91190724 + 17.1 0.000 intron (NM_001257101, intron 1 of 9) intron (NM_001257101, intron 1 of 9) 27607 NR_046435 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr6-1168 chr6 41138178 41138388 + 17.1 0.000 intron (NR_026938, intron 20 of 22) intron (NR_026938, intron 20 of 22) 16066 NM_001271807 340205 Hs.117331 NM_178174 ENSG00000161911 TREML1 GLTL1825|PRO3438|TLT-1|TLT1|dJ238O23.3 triggering receptor expressed on myeloid cells like 1 protein-coding chr21-406 chr21 41878955 41879165 + 17.1 0.000 exon (NM_022115, exon 2 of 31) exon (NM_022115, exon 2 of 31) 284 NR_104257 63977 Hs.473893 NM_022115 ENSG00000141956 PRDM15 C21orf83|PFM15|ZNF298 PR/SET domain 15 protein-coding chr11-1756 chr11 134119185 134119395 + 17.1 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 32073 NR_145790 109623486 NR_145790 SNORD153 - small nucleolar RNA, C/D box 153 snoRNA chr7-998 chr7 106064992 106065202 + 17.1 0.000 Intergenic Intergenic 47215 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr14-1154 chr14 42140869 42141079 + 17.1 0.000 Intergenic Intergenic 534118 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr10-1225 chr10 48414731 48414941 + 17.1 0.000 intron (NM_001323302, intron 7 of 13) AluJr|SINE|Alu 13224 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr5-641 chr5 83722437 83722647 + 17.1 0.000 Intergenic Intergenic -1687 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr14-934 chr14 23171383 23171593 + 17.1 0.000 intron (NM_012244, intron 1 of 10) intron (NM_012244, intron 1 of 10) 12172 NM_012244 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr1-1952 chr1 67811858 67812068 + 17.1 0.000 intron (NM_018841, intron 1 of 3) intron (NM_018841, intron 1 of 3) -20325 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12, DIRAS3 and WLS antisense RNA 1 ncRNA chr14-624 chr14 105482274 105482484 + 17.1 0.000 Intergenic Intergenic -4507 NM_001311 1396 Hs.70327 NM_001311 ENSG00000213145 CRIP1 CRHP|CRIP|CRP-1|CRP1 cysteine rich protein 1 protein-coding chr3-1510 chr3 141311785 141311995 + 17.1 0.000 Intergenic CpG -12296 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr7-572 chr7 24980119 24980329 + 17.1 0.000 promoter-TSS (NM_015550) promoter-TSS (NM_015550) -46 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr1-1496 chr1 1088979 1089189 + 17.1 0.000 intron (NM_017891, intron 4 of 9) CpG -14778 NM_001205252 401934 Hs.568137 NM_001205252 ENSG00000237330 RNF223 - ring finger protein 223 protein-coding chr19-1176 chr19 12484743 12484953 + 17.1 0.000 promoter-TSS (NM_152601) promoter-TSS (NM_152601) -32 NM_152601 163051 Hs.631623 NM_152601 ENSG00000242852 ZNF709 - zinc finger protein 709 protein-coding chr7-1108 chr7 93307451 93307661 + 17.1 0.000 intron (NM_001257998, intron 19 of 28) Tigger17c|DNA|TcMar-Tigger 75190 NM_017667 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr19-1510 chr19 57499873 57500083 + 17.1 0.000 promoter-TSS (NM_001304335) promoter-TSS (NM_001304335) 40 NM_198542 374928 Hs.579576 NM_198542 ENSG00000152439 ZNF773 ZNF419B zinc finger protein 773 protein-coding chr18-425 chr18 2239867 2240077 + 17.1 0.000 Intergenic Intergenic 331533 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr17-1480 chr17 82438604 82438814 + 17.1 0.000 intron (NM_173620, intron 8 of 11) intron (NM_173620, intron 8 of 11) 11017 NM_001193655 79415 Hs.163113 NM_001033046 ENSG00000178927 CYBC1 C17orf62|Eros cytochrome b-245 chaperone 1 protein-coding chr14-680 chr14 74914135 74914345 + 17.1 0.000 intron (NR_163406, intron 3 of 11) intron (NR_163406, intron 3 of 11) 8202 NM_031464 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding chr9-1133 chr9 124357787 124357997 + 17.1 0.000 non-coding (NR_027406, exon 1 of 1) non-coding (NR_027406, exon 1 of 1) 4419 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr4-863 chr4 106365571 106365781 + 17.1 0.000 intron (NM_001195138, intron 1 of 1) intron (NM_001195138, intron 1 of 1) 1759 NM_001195138 100507096 Hs.722750 NM_001195138 ENSG00000250298 GIMD1 - GIMAP family P-loop NTPase domain containing 1 protein-coding chr6-860 chr6 35047277 35047487 + 17.1 0.000 intron (NM_015245, intron 11 of 23) intron (NM_015245, intron 11 of 23) 93957 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr7-634 chr7 151039174 151039384 + 17.1 0.000 intron (NM_001282292, intron 9 of 15) intron (NM_001282292, intron 9 of 15) -9013 NM_020321 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chrX-340 chrX 7084132 7084342 + 17.1 0.000 intron (NM_001178136, intron 2 of 3) intron (NM_001178136, intron 2 of 3) -63053 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr8-687 chr8 124866618 124866828 + 17.1 0.000 Intergenic L2c|LINE|L2 -44665 NR_039809 100616255 NR_039809 ENSG00000263735 MIR4662B - microRNA 4662b ncRNA chr2-1248 chr2 235746423 235746633 + 17.1 0.000 intron (NM_001037131, intron 5 of 17) intron (NM_001037131, intron 5 of 17) -228607 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr17-614 chr17 62627457 62627667 + 17.1 0.000 promoter-TSS (NM_006039) promoter-TSS (NM_006039) -108 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr17-635 chr17 82751796 82752006 + 17.1 0.000 promoter-TSS (NM_005993) promoter-TSS (NM_005993) -164 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr17-1468 chr17 66275775 66275985 + 17.1 0.000 Intergenic Intergenic -26733 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr2-1913 chr2 174005360 174005570 + 17.1 0.000 Intergenic Intergenic -19815 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr2-1846 chr2 208369882 208370092 + 17.1 0.000 intron (NM_001309516, intron 1 of 12) MER34-int|LTR|ERV1 10295 NM_001309516 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr17-730 chr17 42517646 42517856 + 17.1 0.000 intron (NM_005177, intron 20 of 20) intron (NM_005177, intron 20 of 20) 3563 NR_049808 100847046 NR_049808 ENSG00000283929 MIR5010 mir-5010 microRNA 5010 ncRNA chr12-862 chr12 32051547 32051757 + 17.1 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -55155 NM_001363603 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chrX-108 chrX 14029849 14030059 + 17.1 0.000 promoter-TSS (NM_001042479) promoter-TSS (NM_001042479) -62 NM_001042480 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chr1-1947 chr1 50969920 50970130 + 17.1 0.000 promoter-TSS (NM_078626) promoter-TSS (NM_078626) -220 NM_078626 1031 Hs.525324 NM_001262 ENSG00000123080 CDKN2C INK4C|p18|p18-INK4C cyclin dependent kinase inhibitor 2C protein-coding chr9-1720 chr9 111572892 111573102 + 17.1 0.000 intron (NM_001146109, intron 8 of 9) intron (NM_001146109, intron 8 of 9) 26434 NM_012212 22949 Hs.584864 NM_012212 ENSG00000106853 PTGR1 LTB4DH|PGR1|ZADH3 prostaglandin reductase 1 protein-coding chr8-967 chr8 100629617 100629827 + 17.1 0.000 intron (NM_152628, intron 4 of 13) intron (NM_152628, intron 4 of 13) -11317 NM_001363720 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr6-842 chr6 1297799 1298009 + 17.1 0.000 Intergenic L1MEc|LINE|L1 -14194 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr10-2008 chr10 60044351 60044561 + 17.1 0.000 intron (NM_001204403, intron 42 of 43) intron (NM_001204403, intron 42 of 43) -83543 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr10-1402 chr10 79806017 79806227 + 17.1 0.000 non-coding (NR_120613, exon 4 of 7) non-coding (NR_120613, exon 4 of 7) -19780 NR_029407 642361 Hs.164298 NR_029407 ENSG00000272447 LOC642361 - uncharacterized LOC642361 ncRNA chr7-1155 chr7 105782700 105782910 + 17.1 0.000 intron (NM_152749, intron 3 of 3) intron (NM_152749, intron 3 of 3) 93780 NM_152749 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr2-942 chr2 237483409 237483619 + 17.1 0.000 Intergenic Intergenic -2896 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr1-1929 chr1 9690130 9690340 + 17.1 0.000 intron (NM_001350234, intron 1 of 23) intron (NM_001350234, intron 1 of 23) 691 NM_001350234 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr7-1016 chr7 5677638 5677848 + 17.1 0.000 intron (NR_046834, intron 1 of 2) intron (NR_046834, intron 1 of 2) 2718 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr3-2303 chr3 114595591 114595801 + 17.1 0.000 intron (NM_001348803, intron 6 of 13) intron (NM_001348803, intron 6 of 13) 28510 NM_001164347 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr7-493 chr7 95434899 95435109 + 17.1 0.000 promoter-TSS (NM_001018161) promoter-TSS (NM_001018161) 24 NM_000305 5445 Hs.514420 NM_000305 ENSG00000105854 PON2 - paraoxonase 2 protein-coding chr11-1473 chr11 117180129 117180339 + 17.1 0.000 intron (NM_001040455, intron 1 of 25) intron (NM_001040455, intron 1 of 25) 1491 NM_001040455 51092 Hs.712144 NM_015996 ENSG00000149577 SIDT2 CGI-40 SID1 transmembrane family member 2 protein-coding chr9-1449 chr9 136382135 136382345 + 17.1 0.000 intron (NM_003086, intron 16 of 22) intron (NM_003086, intron 16 of 22) -8559 NM_052813 64170 Hs.694071 NM_052813 ENSG00000187796 CARD9 CANDF2|hCARD9 caspase recruitment domain family member 9 protein-coding chr11-1647 chr11 108070070 108070280 + 17.1 0.000 exon (NM_003478, exon 8 of 19) exon (NM_003478, exon 8 of 19) -51392 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr5-1283 chr5 150540983 150541193 + 17.1 0.000 intron (NM_001301063, intron 8 of 13) MER58A|DNA|hAT-Charlie 32957 NM_001543 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr4-346 chr4 147617353 147617563 + 17.1 0.000 promoter-TSS (NM_018241) promoter-TSS (NM_018241) 61 NM_018241 55751 Hs.203896 NM_018241 ENSG00000164168 TMEM184C TMEM34 transmembrane protein 184C protein-coding chr8-984 chr8 120445160 120445370 + 17.1 0.000 promoter-TSS (NM_022045) promoter-TSS (NM_022045) -115 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr11-1678 chr11 43869024 43869234 + 17.1 0.000 Intergenic Intergenic -11702 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr11-869 chr11 1400526 1400736 + 17.1 0.000 intron (NM_003957, intron 1 of 19) intron (NM_003957, intron 1 of 19) -9839 NM_001282218 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr1-2111 chr1 168149030 168149240 + 17.1 0.000 Intergenic MIRb|SINE|MIR -11468 NM_001267609 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr12-1159 chr12 6211697 6211907 + 17.1 0.000 intron (NM_001769, intron 1 of 7) intron (NM_001769, intron 1 of 7) 11402 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr2-3388 chr2 25492388 25492598 + 17.1 0.000 intron (NM_033147, intron 9 of 19) intron (NM_033147, intron 9 of 19) -149903 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr19-961 chr19 18776279 18776489 + 17.1 0.000 intron (NM_015321, intron 13 of 13) intron (NM_015321, intron 13 of 13) 14921 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr10-1285 chr10 29435954 29436164 + 17.1 0.000 intron (NR_110927, intron 2 of 2) MER21C|LTR|ERVL 25816 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr16-940 chr16 58249916 58250126 + 17.1 0.000 promoter-TSS (NM_001142302) promoter-TSS (NM_001142302) 85 NM_001142302 29070 Hs.11614 NM_014157 ENSG00000103021 CCDC113 HSPC065 coiled-coil domain containing 113 protein-coding chr2-1309 chr2 36478300 36478510 + 17.1 0.000 intron (NM_016441, intron 6 of 16) intron (NM_016441, intron 6 of 16) 119763 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr21-220 chr21 44928051 44928261 + 17.1 0.000 non-coding (NR_038314, exon 4 of 4) non-coding (NR_038314, exon 4 of 4) 659 NM_001127491 3689 Hs.375957 NM_000211 ENSG00000160255 ITGB2 CD18|LAD|LCAMB|LFA-1|MAC-1|MF17|MFI7 integrin subunit beta 2 protein-coding chr11-1167 chr11 47974362 47974572 + 17.1 0.000 Intergenic Intergenic -6092 NM_002843 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr21-141 chr21 27955017 27955227 + 17.1 0.000 Intergenic Intergenic -58241 NR_027246 246705 Hs.505079 NM_145180 ENSG00000178457 LINC00314 C21orf94|NCRNA00314 long intergenic non-protein coding RNA 314 ncRNA KQ458383.1-1 KQ458383.1 46731 46941 + 17.1 0.000 NA NA NA NA chr15-1333 chr15 24773180 24773390 + 17.1 0.000 Intergenic CpG -50323 NM_001349460 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr2-3162 chr2 199261254 199261464 + 17.1 0.000 Intergenic L3|LINE|CR1 196580 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr7-2362 chr7 5783652 5783862 + 17.1 0.000 Intergenic L2a|LINE|L2 -2094 NM_207116 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr15-332 chr15 84570950 84571160 + 17.1 0.000 promoter-TSS (NR_003661) promoter-TSS (NR_003661) -79 NR_038273 100506874 Hs.150824 NR_038273 LINC00933 - long intergenic non-protein coding RNA 933 ncRNA chr17-1464 chr17 51085973 51086183 + 17.1 0.000 intron (NM_001130527, intron 1 of 29) AluSx|SINE|Alu 34790 NM_001130528 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr4-1184 chr4 15983103 15983313 + 17.1 0.000 intron (NM_001371408, intron 22 of 24) L2c|LINE|L2 -20033 NM_031950 83888 Hs.98785 NM_031950 ENSG00000137441 FGFBP2 HBP17RP|KSP37 fibroblast growth factor binding protein 2 protein-coding chr22-392 chr22 45978715 45978925 + 17.1 0.000 Intergenic CpG-19213 -1658 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr9-750 chr9 37753908 37754118 + 17.1 0.000 intron (NR_104612, intron 1 of 8) intron (NR_104612, intron 1 of 8) 208 NM_001286954 158234 Hs.655614 NM_144964 ENSG00000165275 TRMT10B RG9MTD3|bA3J10.9 tRNA methyltransferase 10B protein-coding chr3-835 chr3 194396220 194396430 + 17.1 0.000 3' UTR (NM_004488, exon 2 of 2) 3' UTR (NM_004488, exon 2 of 2) 2941 NM_004488 2814 Hs.73734 NM_004488 ENSG00000178732 GP5 CD42d|GPV glycoprotein V platelet protein-coding chr17-2952 chr17 60601260 60601470 + 17.1 0.000 intron (NM_003620, intron 1 of 5) intron (NM_003620, intron 1 of 5) 1182 NM_003620 8493 Hs.286073 NM_003620 ENSG00000170836 PPM1D IDDGIP|PP2C-DELTA|WIP1 protein phosphatase, Mg2+/Mn2+ dependent 1D protein-coding chr9-1232 chr9 134356738 134356948 + 17.1 0.000 intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) -22452 NM_001291920 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chrX-598 chrX 124555309 124555519 + 17.1 0.000 intron (NM_014253, intron 14 of 30) L2c|LINE|L2 209132 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr13-741 chr13 110216567 110216777 + 17.1 0.000 intron (NM_001845, intron 2 of 51) MIRb|SINE|MIR 90485 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr7-1273 chr7 131095432 131095642 + 17.1 0.000 intron (NR_109850, intron 2 of 5) intron (NR_109850, intron 2 of 5) 11493 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr22-791 chr22 49767520 49767730 + 17.1 0.000 Intergenic L1M3f|LINE|L1 56706 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr6-1503 chr6 145814544 145814754 + 17.1 0.000 promoter-TSS (NR_038244) promoter-TSS (NR_038244) 146 NM_001348092 84085 Hs.421095 NM_032145 ENSG00000118496 FBXO30 Fbx30 F-box protein 30 protein-coding chr5-1492 chr5 115599781 115599991 + 17.1 0.000 intron (NM_001164469, intron 3 of 3) L2|LINE|L2 -2269 NR_109875 101927100 Hs.745340 NR_109874 LOC101927100 - uncharacterized LOC101927100 ncRNA chr20-558 chr20 56636194 56636404 + 17.1 0.000 intron (NM_003222, intron 5 of 6) AluSz6|SINE|Alu 6993 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr10-854 chr10 73781883 73782093 + 17.1 0.000 promoter-TSS (NM_203298) promoter-TSS (NM_203298) -60 NM_203298 118487 Hs.181174 NM_203298 ENSG00000172586 CHCHD1 C10orf34|C2360|MRP-S37 coiled-coil-helix-coiled-coil-helix domain containing 1 protein-coding chr14-461 chr14 60982168 60982378 + 17.1 0.000 promoter-TSS (NM_001350253) promoter-TSS (NM_001350253) -583 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr7-1677 chr7 121091293 121091503 + 17.1 0.000 intron (NM_001105533, intron 4 of 17) intron (NM_001105533, intron 4 of 17) 102007 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr10-1444 chr10 58508365 58508575 + 17.1 0.000 Intergenic HAL1|LINE|L1 -4402 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr13-742 chr13 112914361 112914571 + 17.1 0.000 Intergenic Intergenic 54172 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr15-871 chr15 62307666 62307876 + 17.1 0.000 Intergenic L3|LINE|CR1 -3037 NR_107034 102465869 NR_107034 ENSG00000277919 MIR8067 hsa-mir-8067 microRNA 8067 ncRNA chr10-709 chr10 92592914 92593124 + 17.1 0.000 promoter-TSS (NM_004523) promoter-TSS (NM_004523) -111 NM_004523 3832 Hs.8878 NM_004523 ENSG00000138160 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding chr2-1626 chr2 237412252 237412462 + 17.1 0.000 intron (NM_057165, intron 1 of 7) intron (NM_057165, intron 1 of 7) 1807 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chrX-226 chrX 54808698 54808908 + 17.1 0.000 promoter-TSS (NM_201222) promoter-TSS (NM_201222) -278 NM_201222 10916 Hs.522665 NM_014599 ENSG00000102316 MAGED2 11B6|BARTS5|BCG-1|BCG1|HCA10|MAGE-D2 MAGE family member D2 protein-coding chr7-2185 chr7 84729291 84729501 + 17.1 0.000 Intergenic MER65D|LTR|ERV1 196920 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr2-1365 chr2 9191173 9191383 + 17.1 0.000 Intergenic Intergenic -15487 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr22-1348 chr22 24379490 24379700 + 17.1 0.000 intron (NM_001254732, intron 13 of 14) intron (NM_001254732, intron 13 of 14) 37487 NM_001254733 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr11-2537 chr11 77590496 77590706 + 17.1 0.000 exon (NM_173039, exon 1 of 3) exon (NM_173039, exon 1 of 3) 648 NM_173039 282679 Hs.503345 NM_173039 ENSG00000178301 AQP11 AQPX1 aquaporin 11 protein-coding chr11-1036 chr11 1381739 1381949 + 17.1 0.000 Intergenic Intergenic -8090 NR_046331 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr3-1592 chr3 168341509 168341719 + 17.1 0.000 intron (NR_021485, intron 3 of 15) intron (NR_021485, intron 3 of 15) 92092 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr1-1590 chr1 40862324 40862534 + 17.1 0.000 promoter-TSS (NM_133467) promoter-TSS (NM_133467) -66 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr6-844 chr6 1767606 1767816 + 17.1 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 157796 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr11-1680 chr11 44842349 44842559 + 17.1 0.000 intron (NM_130783, intron 2 of 9) intron (NM_130783, intron 2 of 9) 107706 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr21-281 chr21 15483219 15483429 + 17.1 0.000 Intergenic Intergenic -246610 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr8-944 chr8 60018343 60018553 + 17.1 0.000 Intergenic Intergenic 262952 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr6-578 chr6 108492165 108492375 + 17.1 0.000 intron (NM_001323005, intron 10 of 11) intron (NM_001323005, intron 10 of 11) -67555 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr3-569 chr3 56468340 56468550 + 17.1 0.000 promoter-TSS (NM_015576) promoter-TSS (NM_015576) 22 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr17-1839 chr17 13017419 13017629 + 17.1 0.000 intron (NM_001165962, intron 1 of 22) intron (NM_001165962, intron 1 of 22) 503 NM_018127 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr4-657 chr4 1729770 1729980 + 17.1 0.000 intron (NM_006342, intron 4 of 15) LTR13|LTR|ERVK 8354 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chr20-783 chr20 50498200 50498410 + 17.1 0.000 Intergenic Intergenic -12016 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr3-2222 chr3 36219418 36219628 + 17.1 0.000 Intergenic Intergenic -160964 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr19-785 chr19 1000205 1000415 + 17.1 0.000 promoter-TSS (NM_138690) promoter-TSS (NM_138690) -109 NM_138690 116444 Hs.660378 NM_138690 ENSG00000116032 GRIN3B GluN3B|NR3B glutamate ionotropic receptor NMDA type subunit 3B protein-coding chr1-1971 chr1 168226037 168226247 + 17.1 0.000 exon (NM_199344, exon 1 of 8) exon (NM_199344, exon 1 of 8) 138 NM_199344 375035 Hs.645435 NM_199344 ENSG00000213064 SFT2D2 UNQ512|dJ747L4.C1.2 SFT2 domain containing 2 protein-coding chr2-1333 chr2 112092745 112092955 + 17.1 0.000 intron (NM_032824, intron 11 of 18) intron (NM_032824, intron 11 of 18) 37581 NM_032824 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr4-607 chr4 1763555 1763765 + 17.1 0.000 Intergenic CpG -29633 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr5-1175 chr5 34529645 34529855 + 17.1 0.000 Intergenic Intergenic -126578 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr14-212 chr14 51860605 51860815 + 17.1 0.000 promoter-TSS (NM_053064) promoter-TSS (NM_053064) 98 NM_053064 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr9-814 chr9 136409709 136409919 + 17.1 0.000 promoter-TSS (NM_001282946) promoter-TSS (NM_001282946) -759 NM_001282946 23203 Hs.495471 NM_015160 ENSG00000165688 PMPCA Alpha-MPP|CLA1|CPD3|INPP5E|P-55|SCAR2 peptidase, mitochondrial processing alpha subunit protein-coding chr13-240 chr13 49642090 49642300 + 17.1 0.000 Intergenic Intergenic 13688 NM_138450 115761 Hs.558599 NM_138450 ENSG00000152213 ARL11 ARLTS1 ADP ribosylation factor like GTPase 11 protein-coding chr11-1368 chr11 69685933 69686143 + 17.1 0.000 Intergenic CpG -10685 NM_153451 220064 Hs.667996 NM_153451 ENSG00000149716 LTO1 CIAB1|ORAOV1|TAOS1 LTO1 maturation factor of ABCE1 protein-coding chr1-1124 chr1 109620894 109621104 + 17.1 0.000 promoter-TSS (NM_004037) promoter-TSS (NM_004037) 85 NM_001308170 271 Hs.82927 NM_004037 ENSG00000116337 AMPD2 PCH9|SPG63 adenosine monophosphate deaminase 2 protein-coding chr2-687 chr2 74147991 74148201 + 17.1 0.000 promoter-TSS (NM_001035505) promoter-TSS (NM_001035505) 115 NR_045637 100507171 Hs.503348 NR_045634 ENSG00000225439 BOLA3-AS1 - BOLA3 divergent transcript ncRNA chr22-671 chr22 50439009 50439219 + 17.1 0.000 intron (NM_001242899, intron 18 of 22) intron (NM_001242899, intron 18 of 22) 31672 NR_162128 113218480 NR_162128 MIR12114 - microRNA 12114 ncRNA chr13-462 chr13 30977834 30978044 + 17.1 0.000 Intergenic Intergenic 45283 NM_001353388 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr10-385 chr10 14878607 14878817 + 17.1 0.000 promoter-TSS (NM_001193425) promoter-TSS (NM_001193425) -71 NR_034181 79723 Hs.554883 NM_024670 ENSG00000152455 SUV39H2 KMT1B suppressor of variegation 3-9 homolog 2 protein-coding chr14-956 chr14 54902914 54903124 + 17.1 0.000 promoter-TSS (NM_001024070) promoter-TSS (NM_001024070) -193 NM_001024071 2643 Hs.86724 NM_000161 ENSG00000131979 GCH1 DYT14|DYT5|DYT5a|GCH|GTP-CH-1|GTPCH1|HPABH4B GTP cyclohydrolase 1 protein-coding chr12-811 chr12 108826586 108826796 + 17.1 0.000 intron (NM_018984, intron 2 of 14) intron (NM_018984, intron 2 of 14) 860 NM_001161331 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr9-666 chr9 26892664 26892874 + 17.1 0.000 promoter-TSS (NM_024828) promoter-TSS (NM_024828) 33 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr10-2134 chr10 31207716 31207926 + 17.1 0.000 intron (NR_134478, intron 1 of 2) L1PB4|LINE|L1 19938 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr3-1486 chr3 105864533 105864743 + 17.1 0.000 intron (NR_135809, intron 2 of 18) intron (NR_135809, intron 2 of 18) 2953 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr16-975 chr16 67521337 67521547 + 17.1 0.000 intron (NR_104656, intron 1 of 1) intron (NR_104656, intron 1 of 1) 7303 NR_104656 100505942 Hs.121233 NR_104656 LOC100505942 - uncharacterized LOC100505942 ncRNA chr1-1017 chr1 151763334 151763544 + 17.1 0.000 promoter-TSS (NM_001301371) promoter-TSS (NM_001301371) -41 NM_001301371 51686 Hs.713789 NM_016178 ENSG00000143450 OAZ3 AZ3|OAZ-t|TISP15 ornithine decarboxylase antizyme 3 protein-coding chr18-187 chr18 47176113 47176323 + 17.1 0.000 exon (NM_016097, exon 1 of 3) exon (NM_016097, exon 1 of 3) 146 NM_016097 51124 Hs.130917 NM_016097 ENSG00000134049 IER3IP1 HSPC039|MEDS|PRO2309 immediate early response 3 interacting protein 1 protein-coding chr22-709 chr22 49825835 49826045 + 17.1 0.000 promoter-TSS (NM_001304809) promoter-TSS (NM_001304809) -40 NM_001304809 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr1-1385 chr1 109656058 109656268 + 17.1 0.000 promoter-TSS (NR_024538) promoter-TSS (NR_024538) 64 NM_147148 2948 Hs.348387 NM_000850 ENSG00000168765 GSTM4 GSTM4-4|GTM4 glutathione S-transferase mu 4 protein-coding chr16-1080 chr16 59684933 59685143 + 17.1 0.000 Intergenic Intergenic 70153 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr10-484 chr10 119165542 119165752 + 17.1 0.000 promoter-TSS (NR_110305) promoter-TSS (NR_110305) 45 NR_110305 119559 Hs.655168 NM_178867 ENSG00000183605 SFXN4 BCRM1|COXPD18|SLC56A4 sideroflexin 4 protein-coding chr11-947 chr11 130166572 130166782 + 17.1 0.000 intron (NM_021978, intron 1 of 18) intron (NM_021978, intron 1 of 18) 6895 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr4-442 chr4 7210876 7211086 + 17.1 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 18443 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr12-571 chr12 55738260 55738470 + 17.1 0.000 Intergenic Intergenic -4757 NM_005811 10220 Hs.600883 NM_005811 ENSG00000135414 GDF11 BMP-11|BMP11 growth differentiation factor 11 protein-coding chr16-1032 chr16 14003247 14003457 + 17.1 0.000 Intergenic Intergenic 12666 NR_110909 101927311 NR_110909 ENSG00000262097 LINC02185 - long intergenic non-protein coding RNA 2185 ncRNA chr5-1665 chr5 39494175 39494385 + 17.1 0.000 Intergenic Intergenic -26151 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr2-4253 chr2 222951041 222951251 + 17.1 0.000 Intergenic Intergenic 90110 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr15-631 chr15 70826741 70826951 + 17.1 0.000 Intergenic Intergenic -26393 NM_001284357 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr3-1275 chr3 197811484 197811694 + 17.1 0.000 intron (NM_001365717, intron 1 of 19) intron (NM_001365717, intron 1 of 19) 20335 NM_001365715 84859 Hs.518414 NM_032773 ENSG00000186001 LRCH3 - leucine rich repeats and calponin homology domain containing 3 protein-coding chr1-2277 chr1 234933559 234933769 + 17.1 0.000 Intergenic Intergenic 30335 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr1-1990 chr1 7299288 7299498 + 17.1 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) 90361 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr22-1351 chr22 26320390 26320600 + 17.1 0.000 intron (NM_001184776, intron 9 of 14) intron (NM_001184776, intron 9 of 14) -108765 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr17-2069 chr17 68455964 68456174 + 17.1 0.000 intron (NM_017983, intron 1 of 12) MER112|DNA|hAT-Charlie 1427 NM_017983 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding chr12-1523 chr12 71214887 71215097 + 17.1 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -56993 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr13-686 chr13 27117239 27117449 + 17.1 0.000 intron (NM_182488, intron 1 of 8) L1ME3Cz|LINE|L1 -8189 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr19-492 chr19 18683507 18683717 + 17.1 0.000 promoter-TSS (NM_001098482) promoter-TSS (NM_001098482) -68 NM_001098482 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr2-2388 chr2 9552600 9552810 + 17.1 0.000 intron (NM_003183, intron 1 of 18) intron (NM_003183, intron 1 of 18) 3125 NM_003183 6868 Hs.404914 NM_003183 ENSG00000151694 ADAM17 ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE ADAM metallopeptidase domain 17 protein-coding chr9-1291 chr9 76110018 76110228 + 17.1 0.000 intron (NR_120409, intron 9 of 19) intron (NR_120409, intron 9 of 19) 219450 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr3-2333 chr3 135929799 135930009 + 17.1 0.000 Intergenic Intergenic -35824 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr6-1298 chr6 166400854 166401064 + 17.1 0.000 Intergenic Intergenic -17946 NR_073093 51660 Hs.172755 NM_016098 ENSG00000060762 MPC1 BRP44L|CGI-129|MPYCD|SLC54A1 mitochondrial pyruvate carrier 1 protein-coding chr22-466 chr22 26364480 26364690 + 17.1 0.000 intron (NM_001184777, intron 12 of 14) intron (NM_001184777, intron 12 of 14) -64675 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr5-2158 chr5 103927845 103928055 + 17.1 0.000 Intergenic L2b|LINE|L2 -365161 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr1-3192 chr1 145740274 145740484 + 17.1 0.000 3' UTR (NM_014455, exon 9 of 9) 3' UTR (NM_014455, exon 9 of 9) 20880 NR_103845 11126 Hs.488237 NM_007053 ENSG00000117281 CD160 BY55|NK1|NK28 CD160 molecule protein-coding chr4-1512 chr4 77022760 77022970 + 17.1 0.000 intron (NM_001306147, intron 9 of 11) intron (NM_001306147, intron 9 of 11) 52045 NM_001348133 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr16-1469 chr16 102558 102768 + 17.1 0.000 intron (NM_001039476, intron 4 of 10) intron (NM_001039476, intron 4 of 10) 24438 NM_001015052 4350 Hs.459596 NM_002434 ENSG00000103152 MPG AAG|ADPG|APNG|CRA36.1|MDG|Mid1|PIG11|PIG16|anpg N-methylpurine DNA glycosylase protein-coding chr11-962 chr11 108648367 108648577 + 17.1 0.000 Intergenic L1M1|LINE|L1 -16597 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr12-1488 chr12 25929226 25929436 + 17.1 0.000 Intergenic Intergenic 28254 NR_038227 100506451 Hs.560092 NR_038227 RASSF8-AS1 - RASSF8 antisense RNA 1 ncRNA chr7-847 chr7 29565059 29565269 + 17.1 0.000 promoter-TSS (NM_001329997) promoter-TSS (NM_001329997) -369 NM_001329997 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding chr3-674 chr3 77038593 77038803 + 17.1 0.000 Intergenic Intergenic -1401 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr2-3664 chr2 174180321 174180531 + 17.1 0.000 intron (NM_001011708, intron 3 of 9) intron (NM_001011708, intron 3 of 9) 68106 NM_001011708 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr12-650 chr12 50247269 50247479 + 17.1 0.000 intron (NM_016357, intron 2 of 10) MLT1G1|LTR|ERVL-MaLR -13162 NR_031625 100302220 NR_031625 ENSG00000221604 MIR1293 MIRN1293|hsa-mir-1293|mir-1293 microRNA 1293 ncRNA chr21-135 chr21 43362383 43362593 + 17.1 0.000 promoter-TSS (NR_131902) promoter-TSS (NR_131902) -139 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr3-838 chr3 11195959 11196169 + 17.1 0.000 intron (NM_001098212, intron 1 of 1) L2b|LINE|L2 -29917 NM_001098211 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr12-1548 chr12 100661584 100661794 + 17.1 0.000 Intergenic Intergenic 68071 NM_001303131 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr10-1382 chr10 31897002 31897212 + 17.1 0.000 intron (NM_001270696, intron 3 of 17) L1MCb|LINE|L1 11819 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr5-758 chr5 172834303 172834513 + 17.1 0.000 5' UTR (NM_001031711, exon 1 of 10) 5' UTR (NM_001031711, exon 1 of 10) 157 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr3-1107 chr3 57007512 57007722 + 17.1 0.000 intron (NM_001128615, intron 2 of 12) intron (NM_001128615, intron 2 of 12) -53047 NM_181727 353324 Hs.129794 NM_181727 ENSG00000186451 SPATA12 SRG5 spermatogenesis associated 12 protein-coding chr4-212 chr4 2756218 2756428 + 17.1 0.000 promoter-TSS (NM_024309) promoter-TSS (NM_024309) 13 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr20-333 chr20 63230994 63231204 + 17.1 0.000 Intergenic LTR1A2|LTR|ERV1 -4806 NM_139317 79444 Hs.256126 NM_022161 ENSG00000101197 BIRC7 KIAP|LIVIN|ML-IAP|MLIAP|RNF50 baculoviral IAP repeat containing 7 protein-coding chr2-1382 chr2 38146942 38147152 + 17.1 0.000 intron (NR_027252, intron 2 of 2) L2a|LINE|L2 15942 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr17-2339 chr17 60231176 60231386 + 17.1 0.000 TTS (NR_002999) TTS (NR_002999) 364 NR_002999 677681 NR_002999 ENSG00000252577 SCARNA20 ACA66 small Cajal body-specific RNA 20 ncRNA chr2-1786 chr2 235570360 235570570 + 17.1 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -52544 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr17-991 chr17 50671136 50671346 + 17.1 0.000 intron (NM_003786, intron 17 of 30) AluSz|SINE|Alu 36360 NM_001144070 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr4-647 chr4 126052062 126052272 + 17.1 0.000 Intergenic Intergenic 544908 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr4-1139 chr4 24973645 24973855 + 17.1 0.000 intron (NM_173463, intron 1 of 12) MLT1K|LTR|ERVL-MaLR 6454 NM_173463 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr6-1619 chr6 77178974 77179184 + 17.1 0.000 Intergenic Intergenic 284943 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr1-1670 chr1 40241856 40242066 + 17.1 0.000 Intergenic Intergenic -5976 NM_001008740 127391 Hs.406265 NM_001008740 ENSG00000188800 TMCO2 dJ39G22.2 transmembrane and coiled-coil domains 2 protein-coding chr12-864 chr12 43829654 43829864 + 17.1 0.000 Intergenic Intergenic -6102 NM_001286213 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr1-1042 chr1 35769322 35769532 + 17.1 0.000 intron (NM_001190481, intron 1 of 23) CpG 551 NM_001330490 63967 Hs.175613 NM_022111 ENSG00000092853 CLSPN - claspin protein-coding chr18-353 chr18 12402874 12403084 + 17.1 0.000 Intergenic Intergenic -4950 NM_001142405 10650 Hs.514718 NM_006553 ENSG00000141391 PRELID3A C18orf43|HFL-EDDG1|SLMO1 PRELI domain containing 3A protein-coding chr15-739 chr15 95624125 95624335 + 17.1 0.000 Intergenic UCON26|Unknown|Unknown 191137 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr19-1765 chr19 13032333 13032543 + 17.1 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 7659 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr14-1404 chr14 57382340 57382550 + 17.1 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -8141 NM_001011713 122830 Hs.165465 NM_001011713 ENSG00000139977 NAA30 C14orf35|MAK3|Mak3p|NAT12|NAT12P N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding chr2-1185 chr2 68157887 68158097 + 17.1 0.000 promoter-TSS (NM_001256476) promoter-TSS (NM_001256476) 104 NM_020143 56902 Hs.262858 NM_020143 ENSG00000115946 PNO1 KHRBP1|RRP20 partner of NOB1 homolog protein-coding chr8-762 chr8 143396914 143397124 + 17.1 0.000 Intergenic Intergenic -20660 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr1-3052 chr1 9691145 9691355 + 17.1 0.000 promoter-TSS (NM_001350235) promoter-TSS (NM_001350235) -217 NM_001350235 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr19-1425 chr19 57888865 57889075 + 17.1 0.000 promoter-TSS (NM_001144989) promoter-TSS (NM_001144989) 67 NM_001144989 730051 Hs.634143 NM_001144989 ENSG00000204514 ZNF814 - zinc finger protein 814 protein-coding chr16-1070 chr16 30064139 30064349 + 17.1 0.000 promoter-TSS (NM_001127617) promoter-TSS (NM_001127617) -35 NM_184043 226 Hs.513490 NM_000034 ENSG00000149925 ALDOA ALDA|GSD12|HEL-S-87p aldolase, fructose-bisphosphate A protein-coding chr20-928 chr20 6665950 6666160 + 17.1 0.000 Intergenic Intergenic 70081 NR_146909 105372516 Hs.580741 NR_146909 LINC01713 - long intergenic non-protein coding RNA 1713 ncRNA chrX-360 chrX 130100339 130100549 + 17.1 0.000 intron (NM_001127197, intron 1 of 8) intron (NM_001127197, intron 1 of 8) 10056 NM_001421 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr13-851 chr13 99912016 99912226 + 17.1 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) 45044 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr8-206 chr8 20265620 20265830 + 17.1 0.000 intron (NM_021020, intron 1 of 3) intron (NM_021020, intron 1 of 3) 7810 NM_001362884 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr5-542 chr5 149837823 149838033 + 17.1 0.000 intron (NM_001172698, intron 7 of 10) MER5A|DNA|hAT-Charlie 65988 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr16-690 chr16 67833781 67833991 + 17.1 0.000 5' UTR (NM_025082, exon 4 of 16) 5' UTR (NM_025082, exon 4 of 16) -8434 NM_020457 57215 Hs.632200 NM_020457 ENSG00000168286 THAP11 CTG-B43a|CTG-B45d|HRIHFB2206|RONIN THAP domain containing 11 protein-coding chr10-791 chr10 97737159 97737369 + 17.1 0.000 5' UTR (NM_001002262, exon 1 of 12) 5' UTR (NM_001002262, exon 1 of 12) 136 NM_001002262 118813 Hs.744075 NM_144588 ENSG00000155256 ZFYVE27 PROTRUDIN|SPG33 zinc finger FYVE-type containing 27 protein-coding chr13-247 chr13 113617131 113617341 + 17.1 0.000 intron (NM_007111, intron 3 of 11) intron (NM_007111, intron 3 of 11) 32483 NM_007111 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr12-1223 chr12 6279882 6280092 + 17.1 0.000 Intergenic MIRb|SINE|MIR -30449 NM_018173 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chrX-362 chrX 151970833 151971043 + 17.1 0.000 intron (NM_004961, intron 1 of 8) intron (NM_004961, intron 1 of 8) 3738 NM_004961 2564 Hs.22785 NM_004961 ENSG00000102287 GABRE - gamma-aminobutyric acid type A receptor epsilon subunit protein-coding chr7-1009 chr7 1997523 1997733 + 17.1 0.000 intron (NM_001013837, intron 14 of 18) intron (NM_001013837, intron 14 of 18) -57057 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chrX-273 chrX 38801179 38801389 + 17.1 0.000 promoter-TSS (NM_021242) promoter-TSS (NM_021242) -148 NM_021242 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr7-1350 chr7 48168199 48168409 + 17.1 0.000 Intergenic MLT2B4|LTR|ERVL -3154 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr1-1680 chr1 67431002 67431212 + 17.1 0.000 promoter-TSS (NM_001018069) promoter-TSS (NM_001018069) -705 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr1-2757 chr1 54987708 54987918 + 17.1 0.000 intron (NM_182532, intron 2 of 2) intron (NM_182532, intron 2 of 2) 7185 NM_182532 199964 Hs.663950 NM_182532 ENSG00000143001 TMEM61 - transmembrane protein 61 protein-coding chr6-1182 chr6 136249320 136249530 + 17.1 0.000 intron (NM_001318738, intron 1 of 8) intron (NM_001318738, intron 1 of 8) 886 NM_001099286 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr1-2613 chr1 86750132 86750342 + 17.1 0.000 Intergenic Intergenic 45661 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr3-1519 chr3 156317494 156317704 + 17.1 0.000 intron (NM_172159, intron 1 of 13) intron (NM_172159, intron 1 of 13) 26562 NM_001308222 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr9-870 chr9 81389573 81389783 + 17.1 0.000 Intergenic L2b|LINE|L2 299857 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr13-409 chr13 21053345 21053555 + 17.1 0.000 intron (NM_014572, intron 1 of 7) intron (NM_014572, intron 1 of 7) 8136 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr4-448 chr4 86595268 86595478 + 17.1 0.000 intron (NM_080685, intron 1 of 47) intron (NM_080685, intron 1 of 47) 1058 NM_006264 5783 Hs.436142 NM_006264 ENSG00000163629 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase non-receptor type 13 protein-coding chr14-720 chr14 24511972 24512182 + 17.1 0.000 Intergenic Intergenic -3812 NM_001308083 1215 Hs.135626 NM_001836 ENSG00000092009 CMA1 CYH|MCT1|chymase chymase 1 protein-coding chr10-417 chr10 96043508 96043718 + 17.1 0.000 promoter-TSS (NM_001134376) promoter-TSS (NM_001134376) 30 NM_001134376 54619 Hs.596479 NM_019084 ENSG00000107443 CCNJ bA690P14.1 cyclin J protein-coding chr20-364 chr20 33401336 33401546 + 17.1 0.000 promoter-TSS (NM_016408) promoter-TSS (NM_016408) 78 NM_016408 51654 Hs.435952 NM_016082 ENSG00000101391 CDK5RAP1 C20orf34|C42|CGI-05|HSPC167 CDK5 regulatory subunit associated protein 1 protein-coding chr15-958 chr15 41804926 41805136 + 17.1 0.000 intron (NM_001128608, intron 3 of 31) intron (NM_001128608, intron 3 of 31) -23054 NM_005090 8681 Hs.198161 NM_005090 ENSG00000168970 JMJD7-PLA2G4B HsT16992|cPLA2-beta JMJD7-PLA2G4B readthrough protein-coding chr3-1411 chr3 151538840 151539050 + 17.1 0.000 Intergenic Intergenic 27050 NR_049818 100847036 NR_049818 ENSG00000264330 MIR5186 - microRNA 5186 ncRNA chr14-964 chr14 63864389 63864599 + 17.1 0.000 intron (NM_015180, intron 1 of 114) intron (NM_015180, intron 1 of 114) 11490 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr2-1992 chr2 46749059 46749269 + 17.1 0.000 intron (NM_144949, intron 1 of 1) intron (NM_144949, intron 1 of 1) 49869 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr13-411 chr13 40564509 40564719 + 17.1 0.000 intron (NM_002015, intron 1 of 2) intron (NM_002015, intron 1 of 2) -83608 NR_024505 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr11-1260 chr11 122731500 122731710 + 17.1 0.000 intron (NM_001363365, intron 1 of 13) MER44C|DNA|TcMar-Tigger 75883 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr12-1772 chr12 90133837 90134047 + 17.1 0.000 Intergenic Intergenic -159376 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr20-352 chr20 24379599 24379809 + 17.1 0.000 Intergenic Intergenic -89495 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr8-961 chr8 95248724 95248934 + 17.1 0.000 intron (NM_001363260, intron 4 of 4) intron (NM_001363260, intron 4 of 4) -20007 NR_038209 100616530 Hs.554328 NR_038201 ENSG00000253773 C8orf37-AS1 - C8orf37 antisense RNA 1 ncRNA chr1-1737 chr1 120414969 120415179 + 17.0 0.000 promoter-TSS (NR_102404) promoter-TSS (NR_102404) 47 NR_102404 728841 Hs.445080 NM_001037501 NBPF8 NBPF8P NBPF member 8 protein-coding chr12-1192 chr12 96882985 96883195 + 17.0 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -24167 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr1-3849 chr1 33140875 33141085 + 17.0 0.000 Intergenic MIR3|SINE|MIR 35570 NM_001330483 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr1-4612 chr1 154867139 154867349 + 17.0 0.000 intron (NM_001204087, intron 1 of 8) intron (NM_001204087, intron 1 of 8) 826 NM_001365837 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr10-1615 chr10 66322259 66322469 + 17.0 0.000 intron (NM_001127384, intron 12 of 17) L1MEc|LINE|L1 -603672 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr3-1522 chr3 159814217 159814427 + 17.0 0.000 intron (NM_001197113, intron 5 of 10) LTR16|LTR|ERVL -25539 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr6-457 chr6 150866544 150866754 + 17.0 0.000 non-coding (NR_146720, exon 1 of 29) non-coding (NR_146720, exon 1 of 29) 163 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr10-899 chr10 119100734 119100944 + 17.0 0.000 Intergenic MER68|LTR|ERVL -3274 NM_001303111 404636 Hs.434241 NM_207009 ENSG00000119979 DENND10 FAM45A DENN domain containing 10 protein-coding chr11-1661 chr11 3674294 3674504 + 17.0 0.000 TTS (NM_001365127) TTS (NM_001365127) -3015 NM_020402 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr16-688 chr16 57591384 57591594 + 17.0 0.000 Intergenic Intergenic -28249 NM_001290142 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr20-308 chr20 59940785 59940995 + 17.0 0.000 promoter-TSS (NM_006242) promoter-TSS (NM_006242) 501 NM_001190827 63939 Hs.54973 NM_022106 ENSG00000196227 FAM217B C20orf177|dJ551D2.5 family with sequence similarity 217 member B protein-coding chr19-2076 chr19 33473033 33473243 + 17.0 0.000 intron (NM_001166057, intron 5 of 12) intron (NM_001166057, intron 5 of 12) 48653 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr2-2385 chr2 9263645 9263855 + 17.0 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 56938 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr10-907 chr10 35574902 35575112 + 17.0 0.000 Intergenic Intergenic -30334 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding chr1-1739 chr1 148334721 148334931 + 17.0 0.000 promoter-TSS (NR_049810) promoter-TSS (NR_049810) -272 NR_049810 100847044 NR_049810 ENSG00000283676 MIR5087 - microRNA 5087 ncRNA chr1-1750 chr1 205599423 205599633 + 17.0 0.000 intron (NM_181644, intron 9 of 9) intron (NM_181644, intron 9 of 9) -30223 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr7-1251 chr7 16636618 16636828 + 17.0 0.000 intron (NM_020319, intron 1 of 9) intron (NM_020319, intron 1 of 9) 9031 NM_020319 57037 Hs.157378 NM_020319 ENSG00000106524 ANKMY2 ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding chr11-2578 chr11 119262391 119262601 + 17.0 0.000 intron (NM_005188, intron 2 of 15) L1MD3|LINE|L1 50516 NR_106814 102465453 NR_106814 ENSG00000284148 MIR6756 hsa-mir-6756 microRNA 6756 ncRNA chr17-937 chr17 880082 880292 + 17.0 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -16076 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr15-728 chr15 69422396 69422606 + 17.0 0.000 intron (NM_138555, intron 6 of 22) intron (NM_138555, intron 6 of 22) -7472 NR_132969 145694 Hs.147229 NR_132969 ENSG00000259426 LOC145694 - uncharacterized LOC145694 ncRNA chr12-1231 chr12 13390507 13390717 + 17.0 0.000 Intergenic Intergenic -13867 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr10-545 chr10 5977035 5977245 + 17.0 0.000 intron (NM_001256765, intron 1 of 7) CpG 403 NM_002189 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr19-1217 chr19 5703338 5703548 + 17.0 0.000 intron (NM_001276479, intron 9 of 18) intron (NM_001276479, intron 9 of 18) 13148 NM_015414 25873 Hs.408018 NM_015414 ENSG00000130255 RPL36 L36 ribosomal protein L36 protein-coding chr5-1549 chr5 56270712 56270922 + 17.0 0.000 Intergenic Intergenic -37487 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr19-1052 chr19 344200 344410 + 17.0 0.000 intron (NM_017550, intron 1 of 13) CpG 536 NM_001346105 54531 Hs.101891 NM_017550 ENSG00000105556 MIER2 KIAA1193|Mi-er2 MIER family member 2 protein-coding chr14-381 chr14 104930924 104931134 + 17.0 0.000 intron (NM_138790, intron 7 of 10) intron (NM_138790, intron 7 of 10) 6150 NM_001308174 122618 Hs.407101 NM_138790 ENSG00000166428 PLD4 C14orf175 phospholipase D family member 4 protein-coding chr5-1009 chr5 96408447 96408657 + 17.0 0.000 intron (NM_001177875, intron 8 of 13) intron (NM_001177875, intron 8 of 13) 23607 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr3-725 chr3 47802358 47802568 + 17.0 0.000 promoter-TSS (NR_075079) promoter-TSS (NR_075079) -446 NM_014966 22907 Hs.517948 NM_014966 ENSG00000132153 DHX30 DDX30|NEDMIAL|RETCOR DExH-box helicase 30 protein-coding chr7-875 chr7 108454726 108454936 + 17.0 0.000 intron (NM_001371132, intron 1 of 30) intron (NM_001371132, intron 1 of 30) 1566 NM_001193583 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr6-1756 chr6 56539949 56540159 + 17.0 0.000 intron (NM_001144770, intron 53 of 94) intron (NM_001144770, intron 53 of 94) 102835 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr13-882 chr13 34359063 34359273 + 17.0 0.000 intron (NR_146542, intron 1 of 3) intron (NR_146542, intron 1 of 3) 11125 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr2-2540 chr2 201644024 201644234 + 17.0 0.000 promoter-TSS (NM_001044385) promoter-TSS (NM_001044385) -626 NM_001044385 65062 Hs.12319 NM_152388 ENSG00000155755 TMEM237 ALS2CR4|JBTS14 transmembrane protein 237 protein-coding chr11-978 chr11 68314721 68314931 + 17.0 0.000 intron (NM_002335, intron 1 of 22) intron (NM_002335, intron 1 of 22) 2235 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr10-1310 chr10 71209075 71209285 + 17.0 0.000 Intergenic Intergenic -3390 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr2-828 chr2 85418412 85418622 + 17.0 0.000 promoter-TSS (NM_201594) promoter-TSS (NM_201594) -414 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr1-2252 chr1 192763798 192764008 + 17.0 0.000 Intergenic Intergenic -45136 NM_002923 5997 Hs.78944 NM_002923 ENSG00000116741 RGS2 G0S8 regulator of G protein signaling 2 protein-coding chr12-1157 chr12 3704759 3704969 + 17.0 0.000 intron (NM_001144958, intron 3 of 19) intron (NM_001144958, intron 3 of 19) 48245 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr15-641 chr15 25684848 25685058 + 17.0 0.000 intron (NM_024490, intron 16 of 20) intron (NM_024490, intron 16 of 20) 163872 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr19-1049 chr19 57709055 57709265 + 17.0 0.000 promoter-TSS (NM_001085384) promoter-TSS (NM_001085384) 44 NM_001085384 7710 Hs.646378 NM_003444 ENSG00000179909 ZNF154 pHZ-92 zinc finger protein 154 protein-coding chr10-1561 chr10 124285740 124285950 + 17.0 0.000 Intergenic L1MB2|LINE|L1 133078 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr3-904 chr3 132659956 132660166 + 17.0 0.000 promoter-TSS (NM_001321238) promoter-TSS (NM_001321238) 70 NR_132426 84129 Hs.441378 NM_032169 ENSG00000240303 ACAD11 ACAD-11 acyl-CoA dehydrogenase family member 11 protein-coding chr13-378 chr13 99617494 99617704 + 17.0 0.000 intron (NR_104592, intron 1 of 9) intron (NR_104592, intron 1 of 9) 10909 NR_104592 171425 Hs.655642 NM_206808 ENSG00000125246 CLYBL CLB citrate lyase beta like protein-coding chr7-701 chr7 130441040 130441250 + 17.0 0.000 promoter-TSS (NM_001257159) promoter-TSS (NM_001257159) 65 NM_001257159 95681 Hs.368315 NM_018718 ENSG00000106477 CEP41 JBTS15|TSGA14 centrosomal protein 41 protein-coding chr1-3534 chr1 208201418 208201628 + 17.0 0.000 intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 42861 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr21-245 chr21 34989594 34989804 + 17.0 0.000 intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) 49727 NR_026812 80215 Hs.672131 NM_025143 RUNX1-IT1 C21orf96 RUNX1 intronic transcript 1 ncRNA chr18-827 chr18 9514266 9514476 + 17.0 0.000 intron (NM_006788, intron 2 of 9) intron (NM_006788, intron 2 of 9) 38858 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr2-3054 chr2 86476054 86476264 + 17.0 0.000 intron (NM_018433, intron 12 of 25) MER113|DNA|hAT-Charlie 34698 NM_001146688 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr7-1560 chr7 44348433 44348643 + 17.0 0.000 Intergenic Intergenic -22907 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr6-449 chr6 42930187 42930397 + 17.0 0.000 intron (NR_134881, intron 2 of 7) L2c|LINE|L2 812 NM_001318858 107080644 Hs.144914 NM_001318856 CNPY3-GNMT - CNPY3-GNMT readthrough protein-coding chr2-704 chr2 62196135 62196345 + 17.0 0.000 5' UTR (NM_006577, exon 1 of 2) 5' UTR (NM_006577, exon 1 of 2) 125 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr13-1116 chr13 23069621 23069831 + 17.0 0.000 Intergenic L2a|LINE|L2 -111195 NM_000231 6445 Hs.37167 NM_000231 ENSG00000102683 SGCG 35DAG|A4|DAGA4|DMDA|DMDA1|LGMD2C|LGMDR5|MAM|SCARMD2|SCG3|gamma-SG sarcoglycan gamma protein-coding chr6-939 chr6 111973373 111973583 + 17.0 0.000 Intergenic Intergenic -64081 NR_149099 105377946 NR_149099 LINC02527 - long intergenic non-protein coding RNA 2527 ncRNA chr10-1023 chr10 77195190 77195400 + 17.0 0.000 intron (NM_001271519, intron 3 of 28) intron (NM_001271519, intron 3 of 28) 54464 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr1-2069 chr1 25820674 25820884 + 17.0 0.000 promoter-TSS (NM_001099626) promoter-TSS (NM_001099626) -49 NM_001099626 56181 Hs.149305 NM_019557 ENSG00000117640 MTFR1L FAM54B|HYST1888|MST116|MSTP116 mitochondrial fission regulator 1 like protein-coding chr11-1795 chr11 96278312 96278522 + 17.0 0.000 intron (NM_032427, intron 1 of 4) L2c|LINE|L2 -63021 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr11-906 chr11 65316422 65316632 + 17.0 0.000 intron (NM_006779, intron 1 of 1) intron (NM_006779, intron 1 of 1) 1661 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr9-1294 chr9 88826887 88827097 + 17.0 0.000 Intergenic Intergenic -81087 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr20-486 chr20 38275955 38276165 + 17.0 0.000 intron (NR_104170, intron 1 of 1) Tigger3b|DNA|TcMar-Tigger -15325 NM_001029864 85449 Hs.472690 NM_001029864 ENSG00000149633 KIAA1755 - KIAA1755 protein-coding chr1-615 chr1 54887164 54887374 + 17.0 0.000 promoter-TSS (NM_014762) promoter-TSS (NM_014762) -74 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr16-1182 chr16 97040 97250 + 17.0 0.000 intron (NM_001039476, intron 6 of 10) intron (NM_001039476, intron 6 of 10) 18920 NM_001015052 4350 Hs.459596 NM_002434 ENSG00000103152 MPG AAG|ADPG|APNG|CRA36.1|MDG|Mid1|PIG11|PIG16|anpg N-methylpurine DNA glycosylase protein-coding chr2-735 chr2 113626991 113627201 + 17.0 0.000 promoter-TSS (NR_148879) promoter-TSS (NR_148879) 42 NR_024529 118433 Hs.595056 NR_000029 RPL23AP7 RPL23AL1|RPL23A_6_267|bA395L14.9 ribosomal protein L23a pseudogene 7 pseudo chr2-2178 chr2 19541036 19541246 + 17.0 0.000 Intergenic Intergenic -182518 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr9-2754 chr9 100440127 100440337 + 17.0 0.000 intron (NM_001198806, intron 1 of 2) intron (NM_001198806, intron 1 of 2) -1674 NM_001198812 100526694 Hs.598100 NM_001198812 MSANTD3-TMEFF1 C9orf2|C9orf3-TMEFF1|C9orf30-TMEFF1|H7365|TMEFF1|TR-1 MSANTD3-TMEFF1 readthrough protein-coding chr15-365 chr15 43014821 43015031 + 17.0 0.000 intron (NM_174916, intron 29 of 46) SVA_D|Retroposon|SVA 91112 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr14-1213 chr14 83816827 83817037 + 17.0 0.000 Intergenic Intergenic 1174300 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr10-1739 chr10 125895480 125895690 + 17.0 0.000 promoter-TSS (NM_145235) promoter-TSS (NM_145235) -950 NM_001350939 92565 Hs.352591 NM_145235 ENSG00000203780 FANK1 HSD13 fibronectin type III and ankyrin repeat domains 1 protein-coding chr17-1254 chr17 31580923 31581133 + 17.0 0.000 Intergenic Intergenic 5617 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr2-3696 chr2 216583180 216583390 + 17.0 0.000 Intergenic Intergenic 23653 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr2-1297 chr2 223761008 223761218 + 17.0 0.000 intron (NR_110905, intron 5 of 5) Tigger10|DNA|TcMar-Tigger 76469 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr6-633 chr6 52420117 52420327 + 17.0 0.000 promoter-TSS (NM_018100) promoter-TSS (NM_018100) -120 NM_018100 114327 Hs.403171 NM_018100 ENSG00000096093 EFHC1 EJM1|dJ304B14.2 EF-hand domain containing 1 protein-coding chr12-1797 chr12 124498306 124498516 + 17.0 0.000 intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 69201 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr14-668 chr14 68779906 68780116 + 17.0 0.000 Intergenic Intergenic 13903 NM_004926 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr8-515 chr8 125362797 125363007 + 17.0 0.000 intron (NM_001349486, intron 7 of 7) X6A_LINE|LINE|CR1 -67456 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr13-377 chr13 76965750 76965960 + 17.0 0.000 Intergenic Intergenic 17344 NM_001258406 730249 Hs.160789 NM_001258406 ENSG00000102794 ACOD1 CAD|IRG1 aconitate decarboxylase 1 protein-coding chr13-311 chr13 27040048 27040258 + 17.0 0.000 Intergenic Intergenic -85380 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr7-1180 chr7 32588790 32589000 + 17.0 0.000 TTS (NM_015060) TTS (NM_015060) 93406 NM_015060 23080 Hs.128056 NM_015060 ENSG00000105778 AVL9 KIAA0241 AVL9 cell migration associated protein-coding chr7-1461 chr7 98341322 98341532 + 17.0 0.000 intron (NM_018842, intron 3 of 13) FLAM_C|SINE|Alu 59663 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr10-1164 chr10 5945972 5946182 + 17.0 0.000 Intergenic Intergenic 22851 NM_001351096 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr2-1411 chr2 109419944 109420154 + 17.0 0.000 intron (NM_001099289, intron 5 of 9) intron (NM_001099289, intron 5 of 9) -106424 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr21-100 chr21 42009886 42010096 + 17.0 0.000 intron (NR_119384, intron 1 of 1) CpG 369 NM_020727 49854 Hs.434947 NM_020727 ENSG00000173276 ZBTB21 ZNF295 zinc finger and BTB domain containing 21 protein-coding chr7-1361 chr7 77453600 77453810 + 17.0 0.000 Intergenic L2a|LINE|L2 -37356 NM_001350897 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr19-829 chr19 5031642 5031852 + 17.0 0.000 intron (NM_001370094, intron 2 of 10) intron (NM_001370094, intron 2 of 10) 62634 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr11-1413 chr11 35588812 35589022 + 17.0 0.000 Intergenic Intergenic -29543 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr12-1409 chr12 14630112 14630322 + 17.0 0.000 intron (NM_004963, intron 19 of 26) intron (NM_004963, intron 19 of 26) -62334 NM_024829 79887 Hs.131933 NM_024829 ENSG00000121316 PLBD1 - phospholipase B domain containing 1 protein-coding chr1-3697 chr1 184716247 184716457 + 17.0 0.000 intron (NM_025191, intron 13 of 19) intron (NM_025191, intron 13 of 19) 38506 NR_135118 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr15-1326 chr15 84992582 84992792 + 17.0 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 10713 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr3-2580 chr3 123381707 123381917 + 17.0 0.000 intron (NM_183357, intron 1 of 20) L2|LINE|L2 34530 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr10-615 chr10 103638036 103638246 + 17.0 0.000 intron (NM_001365079, intron 2 of 8) intron (NM_001365079, intron 2 of 8) 40074 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr16-904 chr16 30985035 30985245 + 17.0 0.000 promoter-TSS (NM_001142777) promoter-TSS (NM_001142777) -67 NM_001142777 80270 Hs.460618 NM_025193 ENSG00000099377 HSD3B7 CBAS1|PFIC4|SDR11E3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding chr2-4167 chr2 181935877 181936087 + 17.0 0.000 Intergenic Intergenic -18259 NR_048567 151242 Hs.10941 NM_001080545 ENSG00000150722 PPP1R1C IPP5 protein phosphatase 1 regulatory inhibitor subunit 1C protein-coding chr16-1808 chr16 24701038 24701248 + 17.0 0.000 intron (NM_001351850, intron 2 of 23) L3|LINE|CR1 -28508 NM_014494 27327 Hs.655057 NM_014494 ENSG00000090905 TNRC6A CAGH26|FAME6|GW1|GW182|TNRC6 trinucleotide repeat containing adaptor 6A protein-coding chr4-1227 chr4 169272601 169272811 + 17.0 0.000 Intergenic MIRc|SINE|MIR -1750 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr2-1914 chr2 174561323 174561533 + 17.0 0.000 3' UTR (NM_003387, exon 8 of 8) 3' UTR (NM_003387, exon 8 of 8) -3356 NR_104088 101954278 NR_104088 ENSG00000202337 RNU6-8 U6-8 RNA, U6 small nuclear 8 snRNA chr2-1457 chr2 19989886 19990096 + 17.0 0.000 promoter-TSS (NR_110235) promoter-TSS (NR_110235) 114 NM_001006657 57539 Hs.205427 NM_020779 ENSG00000118965 WDR35 CED2|IFT121|IFTA1|SRTD7 WD repeat domain 35 protein-coding chr19-1335 chr19 6218747 6218957 + 17.0 0.000 intron (NM_005934, intron 6 of 11) intron (NM_005934, intron 6 of 11) 61123 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr16-1212 chr16 66662532 66662742 + 17.0 0.000 intron (NM_181521, intron 1 of 3) L1PA16|LINE|L1 34106 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr1-2576 chr1 33410134 33410344 + 17.0 0.000 Intergenic Intergenic -34646 NM_198040 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr16-592 chr16 41973 42183 + 17.0 0.000 Intergenic HERV15-int|LTR|ERV1 11530 NM_016310 51728 Hs.632223 NM_016310 ENSG00000161980 POLR3K C11|C11-RNP3|My010|RPC10|RPC11|RPC12.5 RNA polymerase III subunit K protein-coding chr1-3905 chr1 67616624 67616834 + 17.0 0.000 Intergenic Intergenic -68472 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr9-1993 chr9 125183168 125183378 + 17.0 0.000 intron (NM_002721, intron 1 of 6) intron (NM_002721, intron 1 of 6) 6530 NM_002721 5537 Hs.744091 NM_002721 ENSG00000119414 PPP6C PP6|PP6C protein phosphatase 6 catalytic subunit protein-coding chr1-3149 chr1 66521862 66522072 + 17.0 0.000 Intergenic ERVL-E-int|LTR|ERVL -11626 NM_001308203 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr16-401 chr16 3611458 3611668 + 17.0 0.000 promoter-TSS (NM_032444) promoter-TSS (NM_032444) 43 NM_032444 84464 Hs.143681 NM_032444 ENSG00000188827 SLX4 BTBD12|FANCP|MUS312 SLX4 structure-specific endonuclease subunit protein-coding chr5-1415 chr5 172931235 172931445 + 17.0 0.000 intron (NM_001031711, intron 7 of 9) intron (NM_001031711, intron 7 of 9) 16257 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr11-1382 chr11 119102530 119102740 + 17.0 0.000 promoter-TSS (NM_001382) promoter-TSS (NM_001382) -782 NM_001382 1798 Hs.524081 NM_001382 ENSG00000172269 DPAGT1 ALG7|CDG-Ij|CDG1J|CMS13|CMSTA2|D11S366|DGPT|DPAGT|DPAGT2|G1PT|GPT|UAGT|UGAT dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 protein-coding chr9-2008 chr9 133807738 133807948 + 17.0 0.000 intron (NM_001134398, intron 7 of 29) intron (NM_001134398, intron 7 of 29) -67888 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr16-484 chr16 2721247 2721457 + 17.0 0.000 Intergenic CpG -1128 NM_031948 83886 Hs.332878 NM_031948 ENSG00000172382 PRSS27 CAPH2|MPN serine protease 27 protein-coding chr6-1215 chr6 71544132 71544342 + 17.0 0.000 Intergenic Intergenic 123210 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr1-2951 chr1 84603513 84603723 + 17.0 0.000 intron (NR_125761, intron 2 of 2) LTR19C|LTR|ERV1 17413 NR_125761 103695366 Hs.576097 NR_125761 LINC01461 TCONS_00001552 long intergenic non-protein coding RNA 1461 ncRNA chr20-389 chr20 64083501 64083711 + 17.0 0.000 exon (NM_001007125, exon 2 of 2) exon (NM_001007125, exon 2 of 2) 753 NM_001007125 198437 Hs.570316 NM_001007125 ENSG00000171695 LKAAEAR1 C20orf201 LKAAEAR motif containing 1 protein-coding chr20-491 chr20 62921317 62921527 + 17.0 0.000 intron (NM_022105, intron 1 of 5) intron (NM_022105, intron 1 of 5) 5083 NM_001193370 11083 Hs.517172 NM_022105 ENSG00000101191 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding chr5-924 chr5 141849769 141849979 + 17.0 0.000 Intergenic CpG 16328 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr8-1337 chr8 48975275 48975485 + 17.0 0.000 Intergenic MER70A|LTR|ERVL -53951 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr1-2165 chr1 27296612 27296822 + 17.0 0.000 intron (NM_015023, intron 10 of 15) intron (NM_015023, intron 10 of 15) -25428 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding chr14-715 chr14 102155319 102155529 + 17.0 0.000 intron (NM_001353659, intron 1 of 1) intron (NM_001353659, intron 1 of 1) 15527 NM_001353661 91833 Hs.36859 NM_144574 ENSG00000140153 WDR20 DMR WD repeat domain 20 protein-coding chr6-734 chr6 150418244 150418454 + 17.0 0.000 Intergenic Intergenic 49337 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr4-1310 chr4 128516633 128516843 + 17.0 0.000 intron (NR_125882, intron 8 of 8) intron (NR_125882, intron 8 of 8) 88722 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr6-493 chr6 42704353 42704563 + 17.0 0.000 exon (NM_000322, exon 2 of 3) exon (NM_000322, exon 2 of 3) 18139 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr12-1217 chr12 1519274 1519484 + 17.0 0.000 Intergenic Intergenic 12813 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr1-2960 chr1 110198274 110198484 + 17.0 0.000 exon (NM_001010898, exon 12 of 12) exon (NM_001010898, exon 12 of 12) 11608 NR_046546 100873974 Hs.130515 NR_046546 LINC02586 KCNC4-AS1 long intergenic non-protein coding RNA 2586 ncRNA chr11-1149 chr11 933364 933574 + 17.0 0.000 intron (NR_144509, intron 1 of 20) intron (NR_144509, intron 1 of 20) 7599 NM_012305 161 Hs.19121 NM_012305 ENSG00000183020 AP2A2 ADTAB|CLAPA2|HIP-9|HIP9|HYPJ adaptor related protein complex 2 subunit alpha 2 protein-coding chr17-2264 chr17 17990231 17990441 + 17.0 0.000 intron (NM_031294, intron 5 of 13) intron (NM_031294, intron 5 of 13) 17474 NM_001130091 83450 Hs.579264 NM_031294 ENSG00000171962 DRC3 CFAP134|LRRC48 dynein regulatory complex subunit 3 protein-coding chr16-522 chr16 85751054 85751264 + 17.0 0.000 promoter-TSS (NM_206967) promoter-TSS (NM_206967) -63 NR_161453 404550 Hs.461655 NM_206967 ENSG00000154102 C16orf74 - chromosome 16 open reading frame 74 protein-coding chr5-840 chr5 57316870 57317080 + 17.0 0.000 Intergenic Intergenic 102901 NM_001127236 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr3-1678 chr3 8483344 8483554 + 17.0 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 18209 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr6-1420 chr6 146060591 146060801 + 17.0 0.000 intron (NM_001278065, intron 2 of 9) L1PA15|LINE|L1 31498 NM_001278067 2911 Hs.32945 NM_000838 ENSG00000152822 GRM1 GPRC1A|MGLU1|MGLUR1|PPP1R85|SCA44|SCAR13 glutamate metabotropic receptor 1 protein-coding chr1-5290 chr1 213363907 213364117 + 17.0 0.000 Intergenic Intergenic 312771 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr11-2237 chr11 72321785 72321995 + 17.0 0.000 intron (NM_030813, intron 7 of 16) intron (NM_030813, intron 7 of 16) -77714 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr10-576 chr10 118046739 118046949 + 17.0 0.000 promoter-TSS (NR_026941) promoter-TSS (NR_026941) 23 NR_026939 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA chr8-1243 chr8 124100921 124101131 + 17.0 0.000 intron (NM_001039112, intron 37 of 40) intron (NM_001039112, intron 37 of 40) -60244 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr12-849 chr12 124828937 124829147 + 17.0 0.000 intron (NR_160424, intron 1 of 11) intron (NR_160424, intron 1 of 11) 10629 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr6-1041 chr6 160992812 160993022 + 17.0 0.000 intron (NM_005922, intron 1 of 26) intron (NM_005922, intron 1 of 26) 1148 NM_005922 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr11-1416 chr11 45735639 45735849 + 17.0 0.000 Intergenic Intergenic 13436 NR_047569 100507384 Hs.259426 NR_047569 ENSG00000254519 LOC100507384 - uncharacterized LOC100507384 ncRNA chr7-897 chr7 32587656 32587866 + 17.0 0.000 3' UTR (NM_015060, exon 16 of 16) 3' UTR (NM_015060, exon 16 of 16) 92272 NM_015060 23080 Hs.128056 NM_015060 ENSG00000105778 AVL9 KIAA0241 AVL9 cell migration associated protein-coding chr3-1616 chr3 27568526 27568736 + 17.0 0.000 Intergenic Intergenic -84247 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr9-1519 chr9 109012361 109012571 + 17.0 0.000 intron (NM_003798, intron 1 of 18) intron (NM_003798, intron 1 of 18) 1033 NM_001286974 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr4-1104 chr4 5620219 5620429 + 17.0 0.000 intron (NM_147127, intron 14 of 21) intron (NM_147127, intron 14 of 21) 88235 NM_147127 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr7-970 chr7 5414928 5415138 + 17.0 0.000 intron (NM_001080495, intron 2 of 29) L1MC4|LINE|L1 8513 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr6-811 chr6 45757793 45758003 + 17.0 0.000 Intergenic Intergenic 179699 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr1-3172 chr1 89953319 89953529 + 17.0 0.000 Intergenic LTR8B|LTR|ERV1 41542 NR_002830 492303 Hs.550796 NR_002830 GEMIN8P4 - gem nuclear organelle associated protein 8 pseudogene 4 pseudo chr1-3021 chr1 247338955 247339165 + 17.0 0.000 Intergenic Intergenic -7193 NM_001329733 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr7-2811 chr7 93194456 93194666 + 17.0 0.000 intron (NM_001346642, intron 8 of 9) intron (NM_001346642, intron 8 of 9) 25010 NM_198151 253012 Hs.443169 NM_198151 ENSG00000188175 HEPACAM2 MIKI HEPACAM family member 2 protein-coding chr4-630 chr4 2795395 2795605 + 17.0 0.000 intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) 2415 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr8-169 chr8 20197124 20197334 + 17.0 0.000 promoter-TSS (NM_001693) promoter-TSS (NM_001693) -152 NM_001693 526 Hs.295917 NM_001693 ENSG00000147416 ATP6V1B2 ATP6B1B2|ATP6B2|DOOD|HO57|VATB|VPP3|Vma2|ZLS2 ATPase H+ transporting V1 subunit B2 protein-coding chr8-911 chr8 121438517 121438727 + 17.0 0.000 Intergenic Intergenic -200724 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr9-1141 chr9 132074836 132075046 + 17.0 0.000 intron (NM_001253882, intron 2 of 2) MER117|DNA|hAT-Charlie 4926 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr11-1986 chr11 29018786 29018996 + 17.0 0.000 Intergenic Intergenic -541343 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr14-902 chr14 56004995 56005205 + 17.0 0.000 Intergenic Intergenic -113311 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr9-881 chr9 100213859 100214069 + 17.0 0.000 intron (NR_134606, intron 3 of 16) LTR40c|LTR|ERVL 114721 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding chr5-2404 chr5 108003247 108003457 + 17.0 0.000 intron (NM_001163315, intron 7 of 8) L1MEd|LINE|L1 -332415 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr18-376 chr18 23660076 23660286 + 17.0 0.000 intron (NM_173505, intron 1 of 9) L1MB7|LINE|L1 2730 NM_173505 147463 Hs.355689 NM_173505 ENSG00000154065 ANKRD29 - ankyrin repeat domain 29 protein-coding chr2-1508 chr2 30253054 30253264 + 17.0 0.000 intron (NM_030915, intron 2 of 2) intron (NM_030915, intron 2 of 2) 21625 NM_030915 81606 Hs.567598 NM_030915 ENSG00000213626 LBH - LBH regulator of WNT signaling pathway protein-coding chr16-1815 chr16 31452705 31452915 + 17.0 0.000 Intergenic Intergenic -5494 NM_001288767 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding chr10-1606 chr10 52935339 52935549 + 17.0 0.000 Intergenic Intergenic -163744 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr5-1813 chr5 75156724 75156934 + 17.0 0.000 intron (NM_001164443, intron 11 of 24) MLT1F1|LTR|ERVL-MaLR 80049 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr1-3236 chr1 186139824 186140034 + 17.0 0.000 intron (NM_031935, intron 89 of 106) intron (NM_031935, intron 89 of 106) -156344 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr12-1279 chr12 85627672 85627882 + 17.0 0.000 Intergenic L2a|LINE|L2 208632 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr8-679 chr8 98118137 98118347 + 17.0 0.000 intron (NM_015029, intron 1 of 15) intron (NM_015029, intron 1 of 15) 402 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr1-1812 chr1 202576432 202576642 + 17.0 0.000 intron (NM_032104, intron 12 of 12) intron (NM_032104, intron 12 of 12) 36423 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr9-2837 chr9 126911172 126911382 + 17.0 0.000 Intergenic L1MB8|LINE|L1 -3497 NM_001190729 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr1-3859 chr1 39493316 39493526 + 17.0 0.000 intron (NM_181809, intron 1 of 6) MIR|SINE|MIR 1785 NM_181809 353500 Hs.472497 NM_181809 ENSG00000183682 BMP8A - bone morphogenetic protein 8a protein-coding chr17-720 chr17 82593123 82593333 + 17.0 0.000 intron (NM_004514, intron 8 of 8) intron (NM_004514, intron 8 of 8) 55216 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr4-389 chr4 94451731 94451941 + 17.0 0.000 promoter-TSS (NM_001256425) promoter-TSS (NM_001256425) -21 NM_001256425 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr12-1228 chr12 10753164 10753374 + 17.0 0.000 intron (NR_120463, intron 1 of 6) (TG)n|Simple_repeat|Simple_repeat 3035 NR_120463 101928162 Hs.112950 NR_120463 ENSG00000256888 LINC02366 - long intergenic non-protein coding RNA 2366 ncRNA chr11-1268 chr11 19953974 19954184 + 17.0 0.000 intron (NM_182964, intron 10 of 37) intron (NM_182964, intron 10 of 37) -68477 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr21-75 chr21 5154782 5154992 + 17.0 0.000 promoter-TSS (NM_001368238) promoter-TSS (NM_001368238) -229 NM_005049 5822 Hs.449076 NM_005049 ENSG00000241945 PWP2 EHOC-17|PWP2H|UTP1 PWP2 small subunit processome component protein-coding chr6-540 chr6 108114953 108115163 + 17.0 0.000 Intergenic CpG -8575 NR_145458 100287366 Hs.221513 NR_145458 ENSG00000225174 OSTM1-AS1 - OSTM1 antisense RNA 1 ncRNA chr9-1190 chr9 110828374 110828584 + 17.0 0.000 Intergenic Intergenic 100217 NM_001369398 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr10-2289 chr10 15642100 15642310 + 17.0 0.000 intron (NM_001291494, intron 12 of 28) intron (NM_001291494, intron 12 of 28) 77717 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr14-507 chr14 64505207 64505417 + 17.0 0.000 promoter-TSS (NM_001304508) promoter-TSS (NM_001304508) -99 NM_001304508 7597 Hs.654571 NM_006977 ENSG00000089775 ZBTB25 C14orf51|KUP|ZNF46 zinc finger and BTB domain containing 25 protein-coding chr13-433 chr13 75749538 75749748 + 17.0 0.000 intron (NM_005358, intron 4 of 29) intron (NM_005358, intron 4 of 29) -10677 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr9-1679 chr9 83220753 83220963 + 17.0 0.000 Intergenic MER49|LTR|ERV1 46410 NM_001244962 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr20-547 chr20 62791447 62791657 + 17.0 0.000 Intergenic Intergenic -4921 NR_136405 55257 Hs.443260 NM_018270 ENSG00000101189 MRGBP C20orf20|Eaf7|MRG15BP|URCC4 MRG domain binding protein protein-coding chr19-1547 chr19 45326247 45326457 + 17.0 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -3477 NM_001824 1158 Hs.334347 NM_001824 ENSG00000104879 CKM CKMM|CPK-M|M-CK creatine kinase, M-type protein-coding chr12-1461 chr12 412482 412692 + 17.0 0.000 intron (NM_001130148, intron 2 of 10) MER20|DNA|hAT-Charlie 10943 NM_032358 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr10-998 chr10 79238618 79238828 + 17.0 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -108746 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr18-338 chr18 49456855 49457065 + 17.0 0.000 intron (NM_001353210, intron 1 of 16) intron (NM_001353210, intron 1 of 16) 3685 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr5-946 chr5 78644835 78645045 + 17.0 0.000 intron (NM_005779, intron 1 of 4) intron (NM_005779, intron 1 of 4) 3832 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr9-2391 chr9 130144098 130144308 + 17.0 0.000 promoter-TSS (NR_135124) promoter-TSS (NR_135124) 16 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr19-989 chr19 18001063 18001273 + 17.0 0.000 promoter-TSS (NM_001025604) promoter-TSS (NM_001025604) 44 NM_001025604 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr5-920 chr5 131165115 131165325 + 17.0 0.000 promoter-TSS (NM_005340) promoter-TSS (NM_005340) 36 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr2-3925 chr2 56168220 56168430 + 17.0 0.000 Intergenic Intergenic -15665 NM_001080433 114800 Hs.117136 NM_001080433 ENSG00000055813 CCDC85A - coiled-coil domain containing 85A protein-coding chr7-2536 chr7 73401268 73401478 + 17.0 0.000 Intergenic AluSz|SINE|Alu -32405 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr21-429 chr21 34882149 34882359 + 17.0 0.000 intron (NM_001001890, intron 1 of 5) intron (NM_001001890, intron 1 of 5) 6445 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr1-2247 chr1 183580487 183580697 + 17.0 0.000 intron (NM_001190794, intron 2 of 13) intron (NM_001190794, intron 2 of 13) 10012 NM_001190789 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr17-1363 chr17 73293559 73293769 + 17.0 0.000 intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) 18337 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr10-1176 chr10 58637494 58637704 + 17.0 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -77416 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr2-1836 chr2 171404363 171404573 + 17.0 0.000 intron (NM_024770, intron 1 of 9) MER44D|DNA|TcMar-Tigger 29522 NM_001321154 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr14-782 chr14 54573987 54574197 + 17.0 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 6480 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr19-2191 chr19 17791956 17792166 + 17.0 0.000 Intergenic AluSz6|SINE|Alu -3077 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr8-909 chr8 118952371 118952581 + 17.0 0.000 promoter-TSS (NM_002546) promoter-TSS (NM_002546) 213 NM_001324095 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding chr7-761 chr7 1415769 1415979 + 17.0 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat 43596 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr1-1934 chr1 15835894 15836104 + 17.0 0.000 non-coding (NR_024279, exon 2 of 2) non-coding (NR_024279, exon 2 of 2) -11708 NM_015001 23013 Hs.744843 NM_015001 ENSG00000065526 SPEN HIAA0929|MINT|RBM15C|SHARP spen family transcriptional repressor protein-coding chr6-1815 chr6 140436442 140436652 + 17.0 0.000 Intergenic L1MCa|LINE|L1 231295 NR_037441 100500879 NR_037441 ENSG00000263514 MIR3668 - microRNA 3668 ncRNA chr7-1418 chr7 32490136 32490346 + 17.0 0.000 non-coding (NR_024466, exon 1 of 5) non-coding (NR_024466, exon 1 of 5) 139 NM_012322 23658 Hs.424908 NM_012322 ENSG00000106355 LSM5 YER146W LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr3-641 chr3 126982667 126982877 + 17.0 0.000 Intergenic CpG -5822 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr12-1332 chr12 92972068 92972278 + 17.0 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -42878 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr2-1205 chr2 196479465 196479675 + 17.0 0.000 intron (NM_001348768, intron 1 of 28) intron (NM_001348768, intron 1 of 28) 113413 NM_020760 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr13-616 chr13 30848041 30848251 + 17.0 0.000 Intergenic Intergenic -34416 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr17-1345 chr17 42347375 42347585 + 17.0 0.000 intron (NM_001369512, intron 2 of 23) intron (NM_001369512, intron 2 of 23) 40962 NM_001369518 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr14-587 chr14 56172807 56173017 + 17.0 0.000 intron (NM_021255, intron 1 of 5) intron (NM_021255, intron 1 of 5) 54501 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr21-327 chr21 41283353 41283563 + 17.0 0.000 TTS (NM_012105) TTS (NM_012105) -33343 NM_206964 54097 Hs.473877 NM_058186 ENSG00000183844 FAM3B 2-21|C21orf11|C21orf76|ORF9|PANDER|PRED44 family with sequence similarity 3 member B protein-coding chr4-1192 chr4 40927857 40928067 + 17.0 0.000 intron (NM_173075, intron 9 of 16) intron (NM_173075, intron 9 of 16) -70770 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr8-586 chr8 133076296 133076506 + 17.0 0.000 intron (NM_001045556, intron 1 of 8) intron (NM_001045556, intron 1 of 8) -16047 NM_006748 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr1-2716 chr1 235104328 235104538 + 17.0 0.000 Intergenic CpG 23504 NR_002956 677802 Hs.744743 NR_002956 ENSG00000207181 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA chr19-2389 chr19 6215729 6215939 + 17.0 0.000 intron (NM_005934, intron 8 of 11) intron (NM_005934, intron 8 of 11) 64141 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr20-427 chr20 19932282 19932492 + 17.0 0.000 intron (NM_001242581, intron 2 of 11) MSTD|LTR|ERVL-MaLR 42821 NM_018993 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr6-626 chr6 37396986 37397196 + 17.0 0.000 Intergenic Intergenic -36130 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr3-1209 chr3 51671685 51671895 + 17.0 0.000 intron (NR_103462, intron 1 of 3) CpG 163 NR_103463 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr2-2344 chr2 196263230 196263440 + 17.0 0.000 non-coding (NR_110225, exon 3 of 3) non-coding (NR_110225, exon 3 of 3) 3311 NR_110226 101927482 Hs.191841 NR_110225 HECW2-AS1 - HECW2 antisense RNA 1 ncRNA chr12-826 chr12 49702837 49703047 + 17.0 0.000 intron (NM_001367835, intron 1 of 26) intron (NM_001367835, intron 1 of 26) 4463 NM_001367835 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr14-639 chr14 74018508 74018718 + 17.0 0.000 promoter-TSS (NM_025057) promoter-TSS (NM_025057) 675 NM_001321988 957 Hs.655070 NM_001249 ENSG00000187097 ENTPD5 CD39L4|NTPDase-5|PCPH ectonucleoside triphosphate diphosphohydrolase 5 (inactive) protein-coding chr11-2778 chr11 70155180 70155390 + 17.0 0.000 intron (NR_030691, intron 13 of 24) intron (NR_030691, intron 13 of 24) -47878 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr6-200 chr6 19804745 19804955 + 17.0 0.000 promoter-TSS (NR_134651) promoter-TSS (NR_134651) -91 NR_134649 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr8-1063 chr8 68925246 68925456 + 17.0 0.000 intron (NR_039986, intron 3 of 4) intron (NR_039986, intron 3 of 4) 178839 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr9-1663 chr9 33734954 33735164 + 17.0 0.000 intron (NR_109755, intron 1 of 1) L1PBa1|LINE|L1 3357 NR_109755 101929688 Hs.372465 NR_109755 ENSG00000233776 LINC01251 - long intergenic non-protein coding RNA 1251 ncRNA chr3-1229 chr3 111903086 111903296 + 17.0 0.000 intron (NM_001134437, intron 3 of 17) intron (NM_001134437, intron 3 of 17) 43364 NM_001134439 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr9-719 chr9 17005216 17005426 + 17.0 0.000 Intergenic Intergenic -129719 NM_001286984 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr22-523 chr22 42269703 42269913 + 17.0 0.000 promoter-TSS (NR_036498) promoter-TSS (NR_036498) 55 NR_036498 388906 Hs.730075 NR_036498 OGFRP1 - opioid growth factor receptor pseudogene 1 pseudo chr9-1564 chr9 20437549 20437759 + 17.0 0.000 intron (NM_001286691, intron 4 of 10) intron (NM_001286691, intron 4 of 10) -26416 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr19-727 chr19 39397738 39397948 + 17.0 0.000 non-coding (NR_133915, exon 3 of 3) non-coding (NR_133915, exon 3 of 3) 6465 NM_001317770 55588 Hs.611541 NM_017592 ENSG00000063322 MED29 IXL|MED2 mediator complex subunit 29 protein-coding chr16-1507 chr16 23538769 23538979 + 17.0 0.000 intron (NM_001083614, intron 3 of 8) intron (NM_001083614, intron 3 of 8) 18476 NM_001083614 124454 Hs.620541 NM_001083614 ENSG00000103356 EARS2 COXPD12|MSE1|gluRS|mtGlnRS glutamyl-tRNA synthetase 2, mitochondrial protein-coding chr8-817 chr8 140781624 140781834 + 17.0 0.000 intron (NR_148036, intron 14 of 34) intron (NR_148036, intron 14 of 34) -49076 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr1-2522 chr1 230205916 230206126 + 17.0 0.000 intron (NM_004481, intron 3 of 15) intron (NM_004481, intron 3 of 15) 138783 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr22-237 chr22 29311102 29311312 + 17.0 0.000 intron (NM_001278730, intron 5 of 5) intron (NM_001278730, intron 5 of 5) 4184 NM_152236 10634 Hs.322852 NM_006478 ENSG00000185340 GAS2L1 GAR22 growth arrest specific 2 like 1 protein-coding chr10-835 chr10 119737923 119738133 + 17.0 0.000 intron (NM_014937, intron 1 of 19) intron (NM_014937, intron 1 of 19) 11978 NM_014937 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr4-1056 chr4 78704990 78705200 + 17.0 0.000 Intergenic Intergenic 59101 NR_038303 100505702 Hs.235795 NR_038303 LINC01094 - long intergenic non-protein coding RNA 1094 ncRNA chr7-287 chr7 149714659 149714869 + 17.0 0.000 promoter-TSS (NM_001290187) promoter-TSS (NM_001290187) -247 NM_001290187 84626 Hs.299560 NM_032534 ENSG00000133619 KRBA1 - KRAB-A domain containing 1 protein-coding chr2-1974 chr2 23430361 23430571 + 17.0 0.000 intron (NM_052920, intron 1 of 13) intron (NM_052920, intron 1 of 13) 45287 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr16-760 chr16 67159990 67160200 + 17.0 0.000 promoter-TSS (NM_003789) promoter-TSS (NM_003789) 138 NM_018378 55336 Hs.710714 NM_018378 ENSG00000135722 FBXL8 FBL8 F-box and leucine rich repeat protein 8 protein-coding chr1-1116 chr1 26787930 26788140 + 17.0 0.000 promoter-TSS (NM_017837) promoter-TSS (NM_017837) 72 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr4-518 chr4 169164596 169164806 + 17.0 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 106255 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr8-224 chr8 22999668 22999878 + 17.0 0.000 5' UTR (NM_015178, exon 1 of 10) 5' UTR (NM_015178, exon 1 of 10) 194 NM_015178 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr1-3924 chr1 86648355 86648565 + 17.0 0.000 non-coding (NR_024604, exon 12 of 15) non-coding (NR_024604, exon 12 of 15) 14184 NR_024604 9629 Hs.673847 NM_004921 ENSG00000153923 CLCA3P CLCA3 chloride channel accessory 3, pseudogene pseudo chr12-1996 chr12 132771328 132771538 + 17.0 0.000 3' UTR (NM_005895, exon 24 of 24) 3' UTR (NM_005895, exon 24 of 24) -9601 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr7-663 chr7 148730396 148730606 + 17.0 0.000 intron (NM_001370660, intron 2 of 21) MER3|DNA|hAT-Charlie 30791 NM_001370664 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr5-1393 chr5 132497747 132497957 + 17.0 0.000 Intergenic Intergenic -7079 NR_149069 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr18-432 chr18 51044962 51045172 + 17.0 0.000 intron (NM_005359, intron 1 of 11) intron (NM_005359, intron 1 of 11) 14854 NM_005359 4089 Hs.75862 NM_005359 ENSG00000141646 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding chr1-2461 chr1 63746363 63746573 + 17.0 0.000 Intergenic Intergenic -27549 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr16-1087 chr16 68640986 68641196 + 17.0 0.000 Intergenic L2a|LINE|L2 -4219 NM_001793 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chrX-540 chrX 119240591 119240801 + 17.0 0.000 intron (NM_006667, intron 2 of 2) intron (NM_006667, intron 2 of 2) 4411 NM_006667 10857 Hs.90061 NM_006667 ENSG00000101856 PGRMC1 Dap1|HPR6.6|IZA|MPR progesterone receptor membrane component 1 protein-coding chr7-1270 chr7 107998891 107999101 + 17.0 0.000 intron (NM_002291, intron 3 of 33) intron (NM_002291, intron 3 of 33) 4165 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr18-484 chr18 7272330 7272540 + 17.0 0.000 Intergenic Intergenic 41331 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr12-1212 chr12 130838398 130838608 + 17.0 0.000 intron (NM_001351051, intron 1 of 10) intron (NM_001351051, intron 1 of 10) 747 NM_001351050 2054 Hs.437585 NM_001980 ENSG00000111450 STX2 EPIM|EPM|STX2A|STX2B|STX2C syntaxin 2 protein-coding chr6-702 chr6 43636292 43636502 + 17.0 0.000 exon (NM_001003690, exon 3 of 4) exon (NM_001003690, exon 3 of 4) 557 NM_014628 9587 Hs.122346 NM_014628 ENSG00000124688 MAD2L1BP CMT2 MAD2L1 binding protein protein-coding chr2-3087 chr2 113812156 113812366 + 17.0 0.000 Intergenic L2a|LINE|L2 -55619 NM_001330316 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr7-972 chr7 7157289 7157499 + 17.0 0.000 Intergenic L1M8|LINE|L1 -25221 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr13-401 chr13 97308044 97308254 + 17.0 0.000 intron (NM_144778, intron 2 of 8) intron (NM_144778, intron 2 of 8) 85816 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr9-504 chr9 101449148 101449358 + 17.0 0.000 Intergenic CpG -13479 NM_000035 229 Hs.530274 NM_000035 ENSG00000136872 ALDOB ALDB|ALDO2 aldolase, fructose-bisphosphate B protein-coding chr7-2794 chr7 80450713 80450923 + 17.0 0.000 Intergenic Intergenic 61246 NM_001102386 346562 Hs.335049 NM_001102386 ENSG00000214415 GNAT3 GDCA G protein subunit alpha transducin 3 protein-coding chr10-1282 chr10 27129001 27129211 + 17.0 0.000 intron (NM_139312, intron 9 of 19) intron (NM_139312, intron 9 of 19) 25278 NM_014263 10730 Hs.74647 NM_014263 ENSG00000136758 YME1L1 FTSH|MEG4|OPA11|PAMP|YME1L YME1 like 1 ATPase protein-coding chr6-784 chr6 112037966 112038176 + 17.0 0.000 Intergenic MER5B|DNA|hAT-Charlie -16004 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 CCN6 LIBC|PPAC|PPD|WISP-3|WISP3 cellular communication network factor 6 protein-coding chr21-382 chr21 31630083 31630293 + 17.0 0.000 Intergenic L2a|LINE|L2 -29434 NM_000454 6647 Hs.443914 NM_000454 ENSG00000142168 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1 protein-coding chr3-980 chr3 156685337 156685547 + 17.0 0.000 intron (NM_015508, intron 2 of 5) intron (NM_015508, intron 2 of 5) 8778 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr20-548 chr20 63625961 63626171 + 17.0 0.000 intron (NM_012384, intron 1 of 9) intron (NM_012384, intron 1 of 9) 1035 NM_012384 26205 Hs.473286 NM_012384 ENSG00000101216 GMEB2 GMEB-2|P79PIF|PIF79 glucocorticoid modulatory element binding protein 2 protein-coding chr12-531 chr12 121797068 121797278 + 17.0 0.000 intron (NR_152740, intron 3 of 3) intron (NR_152740, intron 3 of 3) -3485 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr11-872 chr11 34654080 34654290 + 17.0 0.000 intron (NM_012153, intron 6 of 8) intron (NM_012153, intron 6 of 8) 21619 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr10-880 chr10 73744540 73744750 + 17.0 0.000 intron (NM_198597, intron 1 of 22) intron (NM_198597, intron 1 of 22) 273 NM_004922 9632 Hs.81964 NM_004922 ENSG00000176986 SEC24C - SEC24 homolog C, COPII coat complex component protein-coding chr12-2122 chr12 80218387 80218597 + 17.0 0.000 intron (NM_001368062, intron 10 of 62) intron (NM_001368062, intron 10 of 62) 9039 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr1-2264 chr1 208048114 208048324 + 16.8 0.000 intron (NM_025179, intron 17 of 31) intron (NM_025179, intron 17 of 31) -137094 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr12-561 chr12 68808071 68808281 + 16.8 0.000 promoter-TSS (NM_001278462) promoter-TSS (NM_001278462) 4 NM_002392 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding chr12-559 chr12 49366644 49366854 + 16.8 0.000 promoter-TSS (NR_120663) promoter-TSS (NR_120663) -156 NM_001293286 65244 Hs.654826 NM_023071 ENSG00000123352 SPATS2 Nbla00526|P59SCR|SCR59|SPATA10 spermatogenesis associated serine rich 2 protein-coding chr5-1284 chr5 153584581 153584791 + 16.8 0.000 intron (NM_001258020, intron 3 of 16) intron (NM_001258020, intron 3 of 16) 92514 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr16-698 chr16 89402016 89402226 + 16.8 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) -28797 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr2-1742 chr2 26355505 26355715 + 16.8 0.000 intron (NR_137633, intron 1 of 9) intron (NR_137633, intron 1 of 9) -8821 NM_001321971 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr3-791 chr3 125194894 125195104 + 16.8 0.000 intron (NM_001195483, intron 1 of 12) intron (NM_001195483, intron 1 of 12) 16400 NM_001195483 84561 Hs.658514 NM_024628 ENSG00000221955 SLC12A8 CCC9 solute carrier family 12 member 8 protein-coding chr1-1688 chr1 156096804 156097014 + 16.8 0.000 intron (NM_001282625, intron 3 of 12) intron (NM_001282625, intron 3 of 12) 14363 NM_001282625 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr2-2340 chr2 182435894 182436104 + 16.8 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) -8951 NM_001258313 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr19-1189 chr19 45677499 45677709 + 16.8 0.000 intron (NM_001308418, intron 8 of 12) intron (NM_001308418, intron 8 of 12) -2596 NR_037512 100500845 NR_037512 ENSG00000283212 MIR642B mir-642b microRNA 642b ncRNA chr4-1043 chr4 48112237 48112447 + 16.8 0.000 exon (NM_003328, exon 4 of 15) exon (NM_003328, exon 4 of 15) 21908 NM_003328 7294 Hs.479669 NM_003328 ENSG00000074966 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding chrX-280 chrX 101390859 101391069 + 16.8 0.000 promoter-TSS (NM_001287344) promoter-TSS (NM_001287344) -47 NM_001199973 100529097 Hs.432485 NM_001199973 RPL36A-HNRNPH2 - RPL36A-HNRNPH2 readthrough protein-coding chr4-711 chr4 98467631 98467841 + 16.8 0.000 Intergenic Intergenic 190875 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr9-1805 chr9 69976202 69976412 + 16.8 0.000 Intergenic L3|LINE|CR1 -67274 NR_125850 256691 Hs.547172 NM_153267 ENSG00000165072 MAMDC2 - MAM domain containing 2 protein-coding chr3-851 chr3 44993560 44993770 + 16.8 0.000 intron (NM_015004, intron 3 of 7) intron (NM_015004, intron 3 of 7) 17416 NR_023353 23016 Hs.719958 NM_015004 ENSG00000075914 EXOSC7 EAP1|RRP42|Rrp42p|hRrp42p|p8 exosome component 7 protein-coding chr2-1599 chr2 151032997 151033207 + 16.8 0.000 Intergenic Intergenic 228761 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr2-3567 chr2 37244363 37244573 + 16.8 0.000 intron (NR_146408, intron 7 of 10) intron (NR_146408, intron 7 of 10) 12810 NM_001350025 55471 Hs.433466 NM_018607 ENSG00000003509 NDUFAF7 C2orf56|MidA|PRO1853 NADH:ubiquinone oxidoreductase complex assembly factor 7 protein-coding chr4-1059 chr4 88178539 88178749 + 16.8 0.000 intron (NM_001257386, intron 1 of 15) L1MA4|LINE|L1 -19321 NM_001348989 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr9-801 chr9 72527450 72527660 + 16.8 0.000 intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 5754 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr19-1333 chr19 4301954 4302164 + 16.8 0.000 intron (NM_001169126, intron 1 of 4) L2b|LINE|L2 372 NM_001169126 126259 Hs.263928 NM_144615 ENSG00000167664 TMIGD2 CD28H|IGPR-1|IGPR1 transmembrane and immunoglobulin domain containing 2 protein-coding chr17-1600 chr17 64966003 64966213 + 16.8 0.000 TTS (NR_026903) TTS (NR_026903) 9477 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo chr8-351 chr8 55773386 55773596 + 16.8 0.000 promoter-TSS (NM_001363184) promoter-TSS (NM_001363184) 45 NM_001363184 96764 Hs.335068 NM_024831 ENSG00000137574 TGS1 NCOA6IP|PIMT|PIPMT trimethylguanosine synthase 1 protein-coding chr16-1897 chr16 87693594 87693804 + 16.8 0.000 intron (NM_020655, intron 4 of 4) intron (NM_020655, intron 4 of 4) 72287 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr4-1185 chr4 21888218 21888428 + 16.8 0.000 intron (NM_147182, intron 1 of 8) intron (NM_147182, intron 1 of 8) -35135 NR_002813 359822 Hs.354058 NR_002813 ENSG00000280650 KCNIP4-IT1 NCRNA00099|UM9(5)|UM9-5 KCNIP4 intronic transcript 1 ncRNA chr12-991 chr12 111424305 111424515 + 16.8 0.000 intron (NM_005475, intron 2 of 7) intron (NM_005475, intron 2 of 7) -10452 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr2-1037 chr2 62112204 62112414 + 16.8 0.000 intron (NM_001321781, intron 2 of 2) intron (NM_001321781, intron 2 of 2) -83806 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr17-2630 chr17 4612954 4613164 + 16.8 0.000 intron (NR_145431, intron 1 of 1) AluSz6|SINE|Alu 2610 NR_145431 400568 Hs.434312 NR_145431 ENSG00000261863 LINC01996 - long intergenic non-protein coding RNA 1996 ncRNA chr9-1365 chr9 764097 764307 + 16.8 0.000 Intergenic Intergenic 57525 NM_001354344 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr17-654 chr17 78899435 78899645 + 16.8 0.000 intron (NM_001243541, intron 2 of 2) intron (NM_001243541, intron 2 of 2) 3661 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr10-1511 chr10 28130363 28130573 + 16.8 0.000 intron (NR_134518, intron 5 of 16) intron (NR_134518, intron 5 of 16) -57090 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr6-806 chr6 36594188 36594398 + 16.8 0.000 promoter-TSS (NR_036610) promoter-TSS (NR_036610) -20 NR_036610 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr16-811 chr16 58001224 58001434 + 16.8 0.000 promoter-TSS (NM_024598) promoter-TSS (NM_024598) -44 NM_024598 79650 Hs.408702 NM_024598 ENSG00000103005 USB1 C16orf57|HVSL1|Mpn1|PN|hUsb1 U6 snRNA biogenesis phosphodiesterase 1 protein-coding chr3-1516 chr3 150347056 150347266 + 16.8 0.000 Intergenic Intergenic -23414 NR_110186 101928022 Hs.555199 NR_110186 LINC01214 - long intergenic non-protein coding RNA 1214 ncRNA chr7-911 chr7 128880099 128880309 + 16.8 0.000 intron (NM_001366122, intron 34 of 39) intron (NM_001366122, intron 34 of 39) 13874 NM_001195150 100130705 Hs.641532 NM_001195150 ENSG00000272899 ATP6V1FNB - ATP6V1F neighbor protein-coding chr2-1863 chr2 23411914 23412124 + 16.8 0.000 intron (NM_052920, intron 1 of 13) intron (NM_052920, intron 1 of 13) 26840 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr1-2836 chr1 68222026 68222236 + 16.8 0.000 intron (NM_024911, intron 1 of 11) intron (NM_024911, intron 1 of 11) 10392 NM_024911 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chr3-1666 chr3 183381359 183381569 + 16.8 0.000 intron (NM_015078, intron 2 of 29) intron (NM_015078, intron 2 of 29) 46805 NM_015078 23101 Hs.208267 NM_015078 ENSG00000053524 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding chr11-1593 chr11 12950625 12950835 + 16.8 0.000 Intergenic LTR16D2|LTR|ERVL 38818 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr2-1316 chr2 53404086 53404296 + 16.8 0.000 Intergenic MER44B|DNA|TcMar-Tigger -363592 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chrX-353 chrX 71989822 71990032 + 16.8 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -54482 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr4-374 chr4 76949598 76949808 + 16.8 0.000 promoter-TSS (NM_018243) promoter-TSS (NM_018243) -49 NM_001306147 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr6-502 chr6 134673538 134673748 + 16.8 0.000 Intergenic Intergenic -133638 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr7-1268 chr7 96407528 96407738 + 16.8 0.000 Intergenic Intergenic -85486 NM_001160210 10165 Hs.489190 NM_014251 ENSG00000004864 SLC25A13 ARALAR2|CITRIN|CTLN2 solute carrier family 25 member 13 protein-coding chr9-862 chr9 38141909 38142119 + 16.8 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -72787 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr7-1197 chr7 48158544 48158754 + 16.8 0.000 Intergenic Intergenic -12809 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr5-1835 chr5 103487393 103487603 + 16.8 0.000 Intergenic Intergenic 54487 NR_104670 102467212 Hs.641885 NR_104670 ENSG00000248757 LINC02115 - long intergenic non-protein coding RNA 2115 ncRNA chr11-1440 chr11 67382529 67382739 + 16.8 0.000 intron (NR_024469, intron 2 of 3) intron (NR_024469, intron 2 of 3) -8457 NM_001166212 23529 Hs.502977 NM_013246 ENSG00000175505 CLCF1 BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6 cardiotrophin like cytokine factor 1 protein-coding chr1-3810 chr1 17874863 17875073 + 16.8 0.000 Intergenic Intergenic 119635 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr20-370 chr20 48682603 48682813 + 16.8 0.000 intron (NM_020820, intron 10 of 39) intron (NM_020820, intron 10 of 39) 145291 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr1-2950 chr1 84366864 84367074 + 16.8 0.000 intron (NR_003927, intron 5 of 6) intron (NR_003927, intron 5 of 6) 17832 NR_003927 391051 Hs.647646 NR_003927 UOX UOXP|URICASE urate oxidase (pseudogene) pseudo chr6-763 chr6 146913855 146914065 + 16.8 0.000 intron (NR_034115, intron 7 of 10) intron (NR_034115, intron 7 of 10) -110136 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr2-2423 chr2 38179171 38179381 + 16.8 0.000 intron (NR_027252, intron 2 of 2) L2-3_Crp|LINE|L2 48171 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr5-1712 chr5 135379538 135379748 + 16.8 0.000 intron (NM_138609, intron 2 of 8) intron (NM_138609, intron 2 of 8) 19595 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr6-1750 chr6 48700096 48700306 + 16.8 0.000 Intergenic Intergenic -631512 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr5-1840 chr5 107388472 107388682 + 16.8 0.000 intron (NM_001962, intron 2 of 4) intron (NM_001962, intron 2 of 4) 282360 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr17-1134 chr17 64459338 64459548 + 16.8 0.000 intron (NM_001369493, intron 4 of 9) AluJb|SINE|Alu 10328 NM_001291316 284021 Hs.631749 NM_001085423 ENSG00000271605 MILR1 Allergin-1|C17orf60|MCA-32|MCA32 mast cell immunoglobulin like receptor 1 protein-coding chr8-1926 chr8 40350025 40350235 + 16.8 0.000 Intergenic MER44D|DNA|TcMar-Tigger -6767 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr12-1669 chr12 59085092 59085302 + 16.8 0.000 Intergenic Intergenic -164659 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr4-1031 chr4 22434904 22435114 + 16.8 0.000 intron (NM_145290, intron 10 of 18) intron (NM_145290, intron 10 of 18) -80303 NR_162129 113219450 NR_162129 MIR12115 - microRNA 12115 ncRNA chr16-2199 chr16 81864716 81864926 + 16.8 0.000 intron (NM_002661, intron 5 of 32) MER117|DNA|hAT-Charlie 85530 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr1-2281 chr1 245215234 245215444 + 16.8 0.000 intron (NR_151721, intron 3 of 4) intron (NR_151721, intron 3 of 4) 19178 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr16-1306 chr16 87689312 87689522 + 16.8 0.000 intron (NM_020655, intron 3 of 4) intron (NM_020655, intron 3 of 4) 76569 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr3-1187 chr3 196227840 196228050 + 16.8 0.000 intron (NM_152672, intron 4 of 8) intron (NM_152672, intron 4 of 8) 11411 NM_152672 200931 Hs.630585 NM_152672 ENSG00000163959 SLC51A OSTA|OSTalpha solute carrier family 51 alpha subunit protein-coding chrX-320 chrX 135760427 135760637 + 16.8 0.000 intron (NM_001370149, intron 4 of 4) intron (NM_001370149, intron 4 of 4) 7461 NM_001017435 441519 Hs.535080 NM_001017435 ENSG00000269096 CT45A3 CT45-3|CT45-4|CT45.3|CT45.4|CT45A4 cancer/testis antigen family 45 member A3 protein-coding chr9-1804 chr9 62897912 62898122 + 16.8 0.000 promoter-TSS (NR_122077) promoter-TSS (NR_122077) 70 NR_122077 403323 Hs.646340 NM_203449 LOC403323 - uncharacterized LOC403323 ncRNA chr7-2445 chr7 131322157 131322367 + 16.8 0.000 intron (NR_125364, intron 4 of 5) intron (NR_125364, intron 4 of 5) 5517 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr2-2079 chr2 218180320 218180530 + 16.8 0.000 Intergenic Intergenic -13463 NM_000634 3577 Hs.194778 NM_000634 ENSG00000163464 CXCR1 C-C|C-C-CKR-1|CD128|CD181|CDw128a|CKR-1|CMKAR1|IL8R1|IL8RA|IL8RBA C-X-C motif chemokine receptor 1 protein-coding chr10-1970 chr10 30865601 30865811 + 16.8 0.000 intron (NM_001143771, intron 5 of 7) intron (NM_001143771, intron 5 of 7) 133811 NM_001143769 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr6-512 chr6 41733775 41733985 + 16.8 0.000 promoter-TSS (NR_162107) promoter-TSS (NR_162107) -270 NR_162107 113218489 NR_162107 MIR10398 - microRNA 10398 ncRNA chr22-698 chr22 37643324 37643534 + 16.8 0.000 intron (NM_018957, intron 6 of 17) intron (NM_018957, intron 6 of 17) 3760 NM_018957 23616 Hs.601143 NM_018957 ENSG00000100092 SH3BP1 ARHGAP43 SH3 domain binding protein 1 protein-coding chrX-126 chrX 30653030 30653240 + 16.8 0.000 promoter-TSS (NM_203391) promoter-TSS (NM_203391) -224 NM_001128127 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr16-749 chr16 2077707 2077917 + 16.8 0.000 intron (NM_001114382, intron 26 of 40) intron (NM_001114382, intron 26 of 40) 12472 NR_030646 100188847 NR_030646 ENSG00000221656 MIR1225 MIRN1225 microRNA 1225 ncRNA chr6-1048 chr6 3209193 3209403 + 16.8 0.000 Intergenic MER5A1|DNA|hAT-Charlie -13531 NR_038296 100507194 Hs.678053 NR_038295 ENSG00000230269 LINC02525 - long intergenic non-protein coding RNA 2525 ncRNA chr1-2455 chr1 53957467 53957677 + 16.8 0.000 intron (NM_001256409, intron 3 of 8) intron (NM_001256409, intron 3 of 8) 11222 NM_052940 115353 Hs.40094 NM_052940 ENSG00000116212 LRRC42 dJ167A19.4 leucine rich repeat containing 42 protein-coding chr4-682 chr4 151325685 151325895 + 16.8 0.000 Intergenic Intergenic 48617 NM_001353611 345062 Hs.651266 NM_183375 ENSG00000189099 PRSS48 ESSPL serine protease 48 protein-coding chr8-800 chr8 119832633 119832843 + 16.8 0.000 5' UTR (NM_003184, exon 1 of 26) 5' UTR (NM_003184, exon 1 of 26) 103 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr16-953 chr16 85697432 85697642 + 16.8 0.000 Intergenic Intergenic -8583 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr9-875 chr9 93669654 93669864 + 16.8 0.000 intron (NM_005392, intron 17 of 21) intron (NM_005392, intron 17 of 21) 74918 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr7-941 chr7 66590765 66590975 + 16.8 0.000 intron (NR_111977, intron 1 of 5) intron (NR_111977, intron 1 of 5) 1537 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr4-1368 chr4 41072134 41072344 + 16.8 0.000 intron (NM_173075, intron 3 of 16) intron (NM_173075, intron 3 of 16) 142303 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr22-625 chr22 36156830 36157040 + 16.8 0.000 intron (NM_030644, intron 1 of 4) intron (NM_030644, intron 1 of 4) 3820 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr5-743 chr5 436332 436542 + 16.8 0.000 3' UTR (NM_001242412, exon 11 of 11) 3' UTR (NM_001242412, exon 11 of 11) 6723 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr6-1295 chr6 160043063 160043273 + 16.8 0.000 exon (NM_000876, exon 12 of 48) exon (NM_000876, exon 12 of 48) -35504 NR_047511 100271873 Hs.742166 NR_047511 ENSG00000268257 AIRN AIR|IGF2R-AS|IGF2R-AS1|IGF2RAS|NCRNA00088 antisense of IGF2R non-protein coding RNA ncRNA chr7-1351 chr7 48173998 48174208 + 16.8 0.000 intron (NM_152701, intron 1 of 61) intron (NM_152701, intron 1 of 61) 2645 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr11-1352 chr11 45411697 45411907 + 16.8 0.000 Intergenic Intergenic 40405 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr17-1513 chr17 49646817 49647027 + 16.8 0.000 promoter-TSS (NM_001370731) promoter-TSS (NM_001370731) -404 NM_001370730 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding chr1-1356 chr1 25859422 25859632 + 16.8 0.000 promoter-TSS (NM_001287490) promoter-TSS (NM_001287490) -69 NM_001287490 79000 Hs.149305 NM_024037 ENSG00000127423 AUNIP AIBP|C1orf135 aurora kinase A and ninein interacting protein protein-coding chr19-791 chr19 11090376 11090586 + 16.8 0.000 promoter-TSS (NR_163945) promoter-TSS (NR_163945) -822 NR_163945 chr1-2034 chr1 180926850 180927060 + 16.8 0.000 intron (NM_020950, intron 3 of 8) intron (NM_020950, intron 3 of 8) 14058 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr12-1349 chr12 11797706 11797916 + 16.8 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 147957 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr11-1762 chr11 9139176 9139386 + 16.8 0.000 non-coding (NR_145966, exon 22 of 22) non-coding (NR_145966, exon 22 of 22) 44918 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr17-2503 chr17 82328272 82328482 + 16.8 0.000 intron (NM_003004, intron 1 of 4) intron (NM_003004, intron 1 of 4) 5389 NM_003004 6398 Hs.558009 NM_003004 ENSG00000141574 SECTM1 K12|SECTM secreted and transmembrane 1 protein-coding chr2-1294 chr2 200905841 200906051 + 16.8 0.000 Intergenic MER102b|DNA|hAT-Charlie 14028 NM_001142356 60491 Hs.145284 NM_021824 ENSG00000196290 NIF3L1 ALS2CR1|CALS-7|MDS015 NGG1 interacting factor 3 like 1 protein-coding chr11-851 chr11 8682553 8682763 + 16.8 0.000 promoter-TSS (NM_000990) promoter-TSS (NM_000990) -134 NM_000990 6157 Hs.523463 NM_000990 ENSG00000166441 RPL27A L27A ribosomal protein L27a protein-coding chr3-1914 chr3 172169551 172169761 + 16.8 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 129125 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr8-1349 chr8 97995516 97995726 + 16.8 0.000 intron (NM_002380, intron 7 of 18) intron (NM_002380, intron 7 of 18) 46596 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr4-879 chr4 168886516 168886726 + 16.8 0.000 intron (NM_001166110, intron 2 of 11) AluJo|SINE|Alu 54526 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr2-2908 chr2 229816027 229816237 + 16.8 0.000 intron (NM_001348330, intron 9 of 41) intron (NM_001348330, intron 9 of 41) -101577 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr15-914 chr15 63079996 63080206 + 16.8 0.000 Intergenic Intergenic -30714 NR_147233 111064646 Hs.602995 NR_147233 TPM1-AS TPM1-AS1 TPM1 antisense RNA ncRNA chr3-817 chr3 101686904 101687114 + 16.8 0.000 promoter-TSS (NM_000986) promoter-TSS (NM_000986) -291 NM_000986 6152 Hs.477028 NM_000986 ENSG00000114391 RPL24 HEL-S-310|L24 ribosomal protein L24 protein-coding chr4-1498 chr4 47365852 47366062 + 16.8 0.000 intron (NM_000812, intron 5 of 8) LTR33|LTR|ERVL 97745 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chr7-1915 chr7 2529088 2529298 + 16.8 0.000 TTS (NM_001040167) TTS (NM_001040167) 2119 NR_039791 100616116 NR_039791 ENSG00000264357 MIR4648 - microRNA 4648 ncRNA chr1-1212 chr1 205301613 205301823 + 16.8 0.000 TTS (NM_030952) TTS (NM_030952) 20027 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr12-1051 chr12 98533648 98533858 + 16.8 0.000 exon (NM_003276, exon 4 of 4) exon (NM_003276, exon 4 of 4) -17527 NR_027157 100128191 Hs.594042 NR_027157 ENSG00000257167 TMPO-AS1 - TMPO antisense RNA 1 ncRNA chr5-903 chr5 17249233 17249443 + 16.8 0.000 intron (NM_006317, intron 1 of 1) intron (NM_006317, intron 1 of 1) 31707 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr9-432 chr9 113150856 113151066 + 16.8 0.000 promoter-TSS (NM_001860) promoter-TSS (NM_001860) -46 NM_001860 1318 Hs.24030 NM_001860 ENSG00000136867 SLC31A2 COPT2|CTR2|hCTR2 solute carrier family 31 member 2 protein-coding chr15-789 chr15 59191958 59192168 + 16.8 0.000 intron (NM_004998, intron 17 of 27) intron (NM_004998, intron 17 of 27) -14780 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr3-657 chr3 93973743 93973953 + 16.8 0.000 5' UTR (NM_001314077, exon 1 of 16) 5' UTR (NM_001314077, exon 1 of 16) 233 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr15-755 chr15 63474249 63474459 + 16.8 0.000 Intergenic Intergenic -30157 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr8-790 chr8 92024973 92025183 + 16.8 0.000 intron (NM_001198633, intron 1 of 10) intron (NM_001198633, intron 1 of 10) -7398 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr13-945 chr13 98840309 98840519 + 16.8 0.000 intron (NM_001366682, intron 38 of 53) intron (NM_001366682, intron 38 of 53) 8330 NR_046663 100874096 Hs.578066 NR_046663 ENSG00000229918 DOCK9-AS1 - DOCK9 antisense RNA 1 ncRNA chr1-1955 chr1 77683364 77683574 + 16.8 0.000 promoter-TSS (NM_001308237) promoter-TSS (NM_001308237) -42 NM_001308237 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr10-986 chr10 126922264 126922474 + 16.8 0.000 intron (NM_001290223, intron 1 of 51) MSTB|LTR|ERVL-MaLR 16960 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr8-1509 chr8 67767557 67767767 + 16.8 0.000 Intergenic L2c|LINE|L2 -21302 NM_020361 57094 Hs.658850 NM_020361 ENSG00000165078 CPA6 CPAH|ETL5|FEB11 carboxypeptidase A6 protein-coding chr7-1316 chr7 127532764 127532974 + 16.8 0.000 Intergenic L1MD|LINE|L1 52727 NM_024523 79571 Hs.521168 NM_024523 ENSG00000179562 GCC1 GCC1P|GCC88 GRIP and coiled-coil domain containing 1 protein-coding chr3-814 chr3 58384095 58384305 + 16.8 0.000 intron (NM_017771, intron 4 of 17) MER5A1|DNA|hAT-Charlie 49632 NM_000925 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr6-601 chr6 82959595 82959805 + 16.8 0.000 intron (NR_146807, intron 9 of 10) tRNA-Gln-CAA|tRNA|tRNA 106141 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr16-2320 chr16 28608613 28608823 + 16.8 0.000 exon (NM_001055, exon 2 of 8) exon (NM_001055, exon 2 of 8) 610 NM_177534 6817 Hs.567342 NM_001055 ENSG00000196502 SULT1A1 HAST1/HAST2|P-PST|PST|ST1A1|ST1A3|STP|STP1|TSPST1 sulfotransferase family 1A member 1 protein-coding chr12-1087 chr12 63931109 63931319 + 16.8 0.000 intron (NM_001346201, intron 1 of 21) intron (NM_001346201, intron 1 of 21) 86514 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr3-1610 chr3 12720006 12720216 + 16.8 0.000 Intergenic Intergenic 39148 NM_001284407 55287 Hs.475502 NM_018306 ENSG00000088726 TMEM40 - transmembrane protein 40 protein-coding chr16-903 chr16 28075069 28075279 + 16.8 0.000 Intergenic Intergenic -11460 NM_001323900 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr2-1723 chr2 224038603 224038813 + 16.8 0.000 promoter-TSS (NM_001136530) promoter-TSS (NM_001136530) -68 NM_001136530 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr19-864 chr19 52690673 52690883 + 16.8 0.000 promoter-TSS (NM_001277945) promoter-TSS (NM_001277945) -197 NM_001348018 55769 Hs.467210 NM_018300 ENSG00000167766 ZNF83 HPF1|ZNF816B zinc finger protein 83 protein-coding chr7-1049 chr7 124667436 124667646 + 16.8 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 98251 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr11-1748 chr11 124643659 124643869 + 16.8 0.000 intron (NM_001199922, intron 9 of 11) intron (NM_001199922, intron 9 of 11) 20900 NM_032811 84897 Hs.436410 NM_032811 ENSG00000154144 TBRG1 NIAM|TB-5 transforming growth factor beta regulator 1 protein-coding chr1-2525 chr1 246632906 246633116 + 16.8 0.000 intron (NM_152609, intron 4 of 10) intron (NM_152609, intron 4 of 10) 66555 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding chr18-458 chr18 10777260 10777470 + 16.8 0.000 intron (NM_022068, intron 17 of 51) intron (NM_022068, intron 17 of 51) -17716 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr17-1642 chr17 32335843 32336053 + 16.8 0.000 intron (NM_022344, intron 5 of 9) intron (NM_022344, intron 5 of 9) 6225 NM_022344 64149 Hs.655257 NM_022344 ENSG00000108666 C17orf75 NJMU-R1|SRI2 chromosome 17 open reading frame 75 protein-coding chr17-2318 chr17 47718495 47718705 + 16.8 0.000 Intergenic Intergenic -14636 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr10-969 chr10 82742601 82742811 + 16.8 0.000 intron (NR_163252, intron 3 of 8) intron (NR_163252, intron 3 of 8) -509786 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr7-1313 chr7 103447216 103447426 + 16.8 0.000 intron (NR_110141, intron 2 of 3) intron (NR_110141, intron 2 of 3) -1114 NM_198999 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr19-1409 chr19 44800494 44800704 + 16.8 0.000 TTS (NM_001130852) TTS (NM_001130852) -8460 NM_005581 4059 Hs.625725 NM_005581 ENSG00000187244 BCAM AU|CD239|LU|MSK19 basal cell adhesion molecule (Lutheran blood group) protein-coding chr16-1600 chr16 55495012 55495222 + 16.8 0.000 intron (NM_001127891, intron 9 of 12) (AGAATG)n|Simple_repeat|Simple_repeat 13560 NM_001127891 4313 Hs.513617 NM_004530 ENSG00000087245 MMP2 CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1 matrix metallopeptidase 2 protein-coding chr6-1418 chr6 142152810 142153020 + 16.8 0.000 intron (NM_001286372, intron 1 of 5) L2c|LINE|L2 5652 NM_016485 51534 Hs.431367 NM_016485 ENSG00000009844 VTA1 C6orf55|DRG-1|DRG1|HSPC228|LIP5|My012|SBP1 vesicle trafficking 1 protein-coding chr20-908 chr20 49974204 49974414 + 16.8 0.000 Intergenic L2a|LINE|L2 -8671 NM_005985 6615 Hs.48029 NM_005985 ENSG00000124216 SNAI1 SLUGH2|SNA|SNAH|SNAIL|SNAIL1|dJ710H13.1 snail family transcriptional repressor 1 protein-coding chr2-2130 chr2 63742027 63742237 + 16.8 0.000 Intergenic Intergenic -98832 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr3-2299 chr3 111874424 111874634 + 16.8 0.000 intron (NM_001134439, intron 1 of 17) MLT1I|LTR|ERVL-MaLR 14702 NM_001134439 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr3-1895 chr3 148360083 148360293 + 16.8 0.000 intron (NR_146712, intron 3 of 4) intron (NR_146712, intron 3 of 4) 79297 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr2-1413 chr2 122028579 122028789 + 16.8 0.000 Intergenic Intergenic 273033 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr2-1464 chr2 44233612 44233822 + 16.8 0.000 3' UTR (NM_177968, exon 6 of 6) 3' UTR (NM_177968, exon 6 of 6) -41763 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding chr1-3204 chr1 155941484 155941694 + 16.8 0.000 promoter-TSS (NM_181885) promoter-TSS (NM_181885) -100 NM_181885 339403 Hs.449914 NM_181885 ENSG00000173080 RXFP4 GPCR142|GPR100|RLN3R2|RXFPR4 relaxin family peptide/INSL5 receptor 4 protein-coding chr3-565 chr3 46488654 46488864 + 16.8 0.000 Intergenic LTR41B|LTR|ERVL -3525 NM_001321122 4057 Hs.529517 NM_002343 ENSG00000012223 LTF GIG12|HEL110|HLF2|LF lactotransferrin protein-coding chr4-1347 chr4 185165663 185165873 + 16.8 0.000 intron (NM_020827, intron 3 of 4) L1MB4|LINE|L1 22502 NM_001151 291 Hs.246506 NM_001151 ENSG00000151729 SLC25A4 AAC1|ANT|ANT 1|ANT1|MTDPS12|MTDPS12A|PEO2|PEO3|PEOA2|T1 solute carrier family 25 member 4 protein-coding chr7-832 chr7 77697405 77697615 + 16.8 0.000 promoter-TSS (NR_038361) promoter-TSS (NR_038361) -165 NR_038361 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr12-688 chr12 107819063 107819273 + 16.8 0.000 Intergenic LTR41C|LTR|ERVL 44783 NM_203436 121549 Hs.149910 NM_203436 ENSG00000187855 ASCL4 HASH4|bHLHa44 achaete-scute family bHLH transcription factor 4 protein-coding chr5-1510 chr5 139652984 139653194 + 16.8 0.000 intron (NM_001317205, intron 1 of 2) intron (NM_001317205, intron 1 of 2) 2100 NM_001317205 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr11-2173 chr11 885324 885534 + 16.8 0.000 intron (NM_001142677, intron 7 of 11) intron (NM_001142677, intron 7 of 11) 25381 NM_001142677 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr7-436 chr7 103074721 103074931 + 16.8 0.000 promoter-TSS (NM_001161011) promoter-TSS (NM_001161011) -30 NR_105043 222235 Hs.660029 NM_145032 ENSG00000161040 FBXL13 DRC6|Fbl13 F-box and leucine rich repeat protein 13 protein-coding chr5-1057 chr5 134125157 134125367 + 16.8 0.000 intron (NM_001366502, intron 1 of 7) intron (NM_001366502, intron 1 of 7) 1644 NM_001366502 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr2-2901 chr2 222410663 222410873 + 16.8 0.000 Intergenic Intergenic -13220 NM_001320834 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr1-1005 chr1 62325202 62325412 + 16.8 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -5873 NM_001320269 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chr22-421 chr22 21952630 21952840 + 16.8 0.000 intron (NM_014634, intron 1 of 7) CpG 113 NM_014634 9647 Hs.112728 NM_014634 ENSG00000100034 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F protein-coding chr16-1254 chr16 11757645 11757855 + 16.8 0.000 intron (NM_014153, intron 20 of 22) intron (NM_014153, intron 20 of 22) -14893 NM_001324025 51061 Hs.313847 NM_015914 ENSG00000153066 TXNDC11 EFP1 thioredoxin domain containing 11 protein-coding chr16-675 chr16 85316421 85316631 + 16.8 0.000 Intergenic Intergenic -10201 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr4-1519 chr4 100895762 100895972 + 16.8 0.000 Intergenic MIRb|SINE|MIR -220754 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr18-372 chr18 8801137 8801347 + 16.8 0.000 intron (NM_015210, intron 10 of 16) intron (NM_015210, intron 10 of 16) 83861 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr9-1466 chr9 78035044 78035254 + 16.8 0.000 Intergenic L2b|LINE|L2 -3338 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr12-1250 chr12 46999093 46999303 + 16.8 0.000 Intergenic MER44B|DNA|TcMar-Tigger -80405 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chr12-838 chr12 102567267 102567477 + 16.8 0.000 Intergenic L2c|LINE|L2 -86809 NM_000618 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr3-1042 chr3 185200605 185200815 + 16.8 0.000 intron (NM_001966, intron 6 of 6) intron (NM_001966, intron 6 of 6) 37809 NR_038990 339926 Hs.567848 NR_038990 ENSG00000223358 EHHADH-AS1 - EHHADH antisense RNA 1 ncRNA chr8-1112 chr8 89782171 89782381 + 16.8 0.000 intron (NM_003821, intron 7 of 10) MER44B|DNA|TcMar-Tigger 24460 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding chr12-538 chr12 26833078 26833288 + 16.8 0.000 promoter-TSS (NM_002223) promoter-TSS (NM_002223) 11 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr13-175 chr13 33542702 33542912 + 16.8 0.000 intron (NM_001243476, intron 3 of 17) CpG 133987 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr19-1137 chr19 13748623 13748833 + 16.8 0.000 intron (NM_001320569, intron 1 of 8) MIR|SINE|MIR 833 NM_001320569 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr17-1066 chr17 78169690 78169900 + 16.8 0.000 intron (NM_001320523, intron 1 of 2) intron (NM_001320523, intron 1 of 2) 1250 NM_001363778 9144 Hs.464210 NM_004710 ENSG00000108639 SYNGR2 - synaptogyrin 2 protein-coding chr17-1168 chr17 39223624 39223834 + 16.8 0.000 intron (NM_001351360, intron 1 of 10) intron (NM_001351360, intron 1 of 10) 2216 NM_001351360 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr1-3384 chr1 198881277 198881487 + 16.8 0.000 intron (NR_040073, intron 2 of 2) intron (NR_040073, intron 2 of 2) -22229 NR_029626 406995 NR_029626 ENSG00000207759 MIR181A1 MIR213|MIRN181A1|MIRN213|hsa-mir-181a-1|mir-181a-1|mir-213 microRNA 181a-1 ncRNA chr3-349 chr3 86991150 86991360 + 16.8 0.000 promoter-TSS (NM_016206) promoter-TSS (NM_016206) -106 NM_001320494 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr4-983 chr4 119692055 119692265 + 16.8 0.000 Intergenic MER5B|DNA|hAT-Charlie -63356 NM_001083 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr9-1482 chr9 122445219 122445429 + 16.8 0.000 Intergenic Intergenic 32602 NM_001004451 347168 Hs.632692 NM_001004451 ENSG00000136834 OR1J1 OR9-18|hg32 olfactory receptor family 1 subfamily J member 1 protein-coding chr5-1434 chr5 14410834 14411044 + 16.8 0.000 intron (NM_007118, intron 33 of 56) intron (NM_007118, intron 33 of 56) -53044 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr2-1903 chr2 149222101 149222311 + 16.8 0.000 Intergenic Intergenic 104032 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr3-1483 chr3 99509234 99509444 + 16.8 0.000 Intergenic Intergenic -129255 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr2-3431 chr2 95015276 95015486 + 16.8 0.000 Intergenic LTR53-int|LTR|ERVL -10274 NM_022438 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr2-2137 chr2 111458848 111459058 + 16.8 0.000 intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 36208 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr2-2071 chr2 205755786 205755996 + 16.8 0.000 intron (NM_018534, intron 12 of 15) intron (NM_018534, intron 12 of 15) 73390 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr15-215 chr15 39934049 39934259 + 16.8 0.000 promoter-TSS (NM_001013703) promoter-TSS (NM_001013703) 39 NM_001013703 440275 Hs.656673 NM_001013703 ENSG00000128829 EIF2AK4 GCN2|PVOD2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding chr22-758 chr22 31977236 31977446 + 16.8 0.000 intron (NR_149128, intron 2 of 4) intron (NR_149128, intron 2 of 4) 6518 NR_149128 105372999 Hs.512525 NR_149128 LINC02558 - long intergenic non-protein coding RNA 2558 ncRNA chr10-1276 chr10 13201154 13201364 + 16.8 0.000 intron (NM_018518, intron 16 of 19) intron (NM_018518, intron 16 of 19) -16010 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr19-2239 chr19 46955479 46955689 + 16.8 0.000 intron (NM_004491, intron 3 of 6) Tigger4b|DNA|TcMar-Tigger -64253 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr15-773 chr15 34810755 34810965 + 16.8 0.000 non-coding (NR_120329, exon 3 of 3) non-coding (NR_120329, exon 3 of 3) -15311 NM_005159 70 Hs.118127 NM_005159 ENSG00000159251 ACTC1 ACTC|ASD5|CMD1R|CMH11|LVNC4 actin alpha cardiac muscle 1 protein-coding chr8-797 chr8 106219256 106219466 + 16.8 0.000 Intergenic Intergenic -50817 NM_001198533 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr2-3317 chr2 143955473 143955683 + 16.8 0.000 intron (NM_024659, intron 7 of 9) intron (NM_024659, intron 7 of 9) 18511 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr2-3025 chr2 64201202 64201412 + 16.8 0.000 non-coding (NR_033837, exon 3 of 6) non-coding (NR_033837, exon 3 of 6) 4178 NR_033837 150992 Hs.272318 NR_033837 ENSG00000230923 LINC00309 NCRNA00309 long intergenic non-protein coding RNA 309 ncRNA chr7-2155 chr7 47771424 47771634 + 16.8 0.000 Intergenic Intergenic 10053 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr17-1889 chr17 57881228 57881438 + 16.8 0.000 intron (NM_001271875, intron 2 of 10) intron (NM_001271875, intron 2 of 10) 22056 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr3-1063 chr3 49209466 49209676 + 16.8 0.000 intron (NM_001135197, intron 1 of 7) AluSz|SINE|Alu 10073 NM_001135197 339834 Hs.631931 NM_178173 ENSG00000173421 CCDC36 CT74 coiled-coil domain containing 36 protein-coding chr12-1367 chr12 51269729 51269939 + 16.8 0.000 intron (NM_001031628, intron 1 of 3) CpG 376 NM_001033873 57228 Hs.652389 NM_001031628 ENSG00000170545 SMAGP hSMAGP small cell adhesion glycoprotein protein-coding chr10-1747 chr10 625396 625606 + 16.8 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -3063 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr2-2812 chr2 48107649 48107859 + 16.8 0.000 Intergenic Intergenic -201961 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr13-476 chr13 48571589 48571799 + 16.8 0.000 Intergenic Intergenic 9207 NR_051983 100129597 Hs.175225 NR_051983 ENSG00000233610 LINC00462 - long intergenic non-protein coding RNA 462 ncRNA chr9-1593 chr9 97598825 97599035 + 16.8 0.000 intron (NM_001166116, intron 9 of 9) intron (NM_001166116, intron 9 of 9) 34438 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr12-1532 chr12 83753591 83753801 + 16.8 0.000 Intergenic Intergenic 1066541 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr22-1332 chr22 19120931 19121141 + 16.8 0.000 intron (NM_001184781, intron 1 of 9) intron (NM_001184781, intron 1 of 9) 1376 NM_005137 9993 Hs.517357 NM_005137 ENSG00000070413 DGCR2 DGS-C|IDD|LAN|SEZ-12 DiGeorge syndrome critical region gene 2 protein-coding chr10-1864 chr10 86775305 86775515 + 16.8 0.000 intron (NM_004329, intron 1 of 12) intron (NM_004329, intron 1 of 12) 18771 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr3-894 chr3 64650886 64651096 + 16.8 0.000 intron (NM_001318781, intron 8 of 38) intron (NM_001318781, intron 8 of 38) -33879 NR_038264 100507098 Hs.660881 NR_038264 ENSG00000241684 ADAMTS9-AS2 - ADAMTS9 antisense RNA 2 ncRNA chr10-922 chr10 110209150 110209360 + 16.8 0.000 promoter-TSS (NM_001008541) promoter-TSS (NM_001008541) -976 NM_001008541 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr19-622 chr19 6280112 6280322 + 16.8 0.000 promoter-TSS (NM_005934) promoter-TSS (NM_005934) -242 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr10-1204 chr10 132790501 132790711 + 16.8 0.000 Intergenic Intergenic -4459 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr11-2880 chr11 36747209 36747419 + 16.8 0.000 Intergenic Intergenic -149035 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr17-879 chr17 17782096 17782306 + 16.8 0.000 intron (NM_030665, intron 2 of 5) CpG -2672 NR_024007 140771 Hs.352643 NM_144774 ENSG00000226746 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 ncRNA chr3-1505 chr3 130014641 130014851 + 16.8 0.000 Intergenic Intergenic 40026 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr13-300 chr13 37000805 37001015 + 16.8 0.000 intron (NM_181503, intron 1 of 10) CpG 124 NM_181503 11340 Hs.294041 NM_181503 ENSG00000120699 EXOSC8 CIP3|EAP2|OIP2|PCH1C|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding chr13-566 chr13 32639610 32639820 + 16.8 0.000 intron (NM_015032, intron 1 of 34) intron (NM_015032, intron 1 of 34) 53263 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr10-1854 chr10 70190827 70191037 + 16.8 0.000 Intergenic Intergenic -20418 NM_001142648 56681 Hs.499960 NM_020150 ENSG00000079332 SAR1A SAR1|SARA1|Sara|masra2 secretion associated Ras related GTPase 1A protein-coding chr12-1892 chr12 64759743 64759953 + 16.8 0.000 promoter-TSS (NM_002076) promoter-TSS (NM_002076) 351 NM_001330187 23329 Hs.192492 NM_015279 ENSG00000111490 TBC1D30 - TBC1 domain family member 30 protein-coding chr16-1417 chr16 4081188 4081398 + 16.8 0.000 intron (NM_001116, intron 2 of 10) intron (NM_001116, intron 2 of 10) 35149 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr7-3031 chr7 98108454 98108664 + 16.8 0.000 intron (NM_014916, intron 1 of 13) intron (NM_014916, intron 1 of 13) 1697 NM_014916 22853 Hs.444179 NM_014916 ENSG00000164715 LMTK2 AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk|hBREK lemur tyrosine kinase 2 protein-coding chr16-923 chr16 89805598 89805808 + 16.8 0.000 intron (NM_001018112, intron 6 of 10) AluJb|SINE|Alu 10944 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr3-1034 chr3 159067454 159067664 + 16.8 0.000 Intergenic Intergenic -1693 NM_001197114 100505385 Hs.134665 NM_001197113 ENSG00000283154 IQCJ-SCHIP1 - IQCJ-SCHIP1 readthrough protein-coding chr2-1614 chr2 218216982 218217192 + 16.8 0.000 promoter-TSS (NM_005731) promoter-TSS (NM_005731) -102 NM_152862 10109 Hs.529303 NM_005731 ENSG00000163466 ARPC2 ARC34|PNAS-139|PRO2446|p34-Arc actin related protein 2/3 complex subunit 2 protein-coding chr17-1082 chr17 28661943 28662153 + 16.8 0.000 promoter-TSS (NM_001320755) promoter-TSS (NM_001320755) 141 NR_045585 6388 Hs.514036 NM_006923 ENSG00000132581 SDF2 - stromal cell derived factor 2 protein-coding chr20-816 chr20 49724826 49725036 + 16.8 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -11053 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr4-608 chr4 5051165 5051375 + 16.8 0.000 promoter-TSS (NM_018401) promoter-TSS (NM_018401) -210 NM_001306082 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr1-1552 chr1 1237732 1237942 + 16.8 0.000 Intergenic Intergenic 5600 NM_080605 126792 Hs.284284 NM_080605 ENSG00000176022 B3GALT6 EDSP2|EDSSPD2|SEMDJL1|beta3GalT6 beta-1,3-galactosyltransferase 6 protein-coding chr8-683 chr8 104273021 104273231 + 16.8 0.000 Intergenic LOR1-int|LTR|ERV1 49791 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr4-1699 chr4 168868193 168868403 + 16.8 0.000 intron (NM_001367567, intron 1 of 11) MLT1K|LTR|ERVL-MaLR 36203 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr20-409 chr20 50415682 50415892 + 16.8 0.000 Intergenic Intergenic -94445 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr10-1933 chr10 5094617 5094827 + 16.8 0.000 intron (NM_003739, intron 1 of 8) intron (NM_003739, intron 1 of 8) 308 NM_003739 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding chr5-1185 chr5 59786537 59786747 + 16.8 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) -17794 NM_001364601 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr18-442 chr18 12839724 12839934 + 16.8 0.000 intron (NM_080423, intron 2 of 8) intron (NM_080423, intron 2 of 8) 1133 NM_001308287 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase non-receptor type 2 protein-coding chr1-1627 chr1 154479968 154480178 + 16.8 0.000 non-coding (NR_135169, exon 6 of 6) non-coding (NR_135169, exon 6 of 6) -22146 NM_182499 126668 Hs.387671 NM_182499 ENSG00000163239 TDRD10 - tudor domain containing 10 protein-coding chr10-1860 chr10 79184275 79184485 + 16.8 0.000 intron (NM_020338, intron 4 of 24) MIRb|SINE|MIR 115414 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr3-1847 chr3 101119570 101119780 + 16.8 0.000 Intergenic MER103C|DNA|hAT-Charlie -126185 NM_001349330 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr8-1815 chr8 121003982 121004192 + 16.8 0.000 Intergenic Intergenic -192041 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr2-1979 chr2 28129968 28130178 + 16.8 0.000 intron (NM_199193, intron 8 of 13) intron (NM_199193, intron 8 of 13) 76888 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr8-767 chr8 19614708 19614918 + 16.8 0.000 intron (NR_148898, intron 1 of 9) intron (NR_148898, intron 1 of 9) -12268 NM_001354491 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr7-902 chr7 74083458 74083668 + 16.8 0.000 promoter-TSS (NM_002314) promoter-TSS (NM_002314) -241 NM_002314 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr8-1341 chr8 67506171 67506381 + 16.8 0.000 intron (NM_020361, intron 6 of 10) Tigger12A|DNA|TcMar-Tigger 162442 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr7-1438 chr7 50664760 50664970 + 16.8 0.000 intron (NM_001350816, intron 6 of 17) intron (NM_001350816, intron 6 of 17) 40436 NM_001001550 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr5-1481 chr5 96870233 96870443 + 16.8 0.000 Intergenic MER90a|LTR|ERV1 -5601 NM_022350 64167 Hs.482910 NM_022350 ENSG00000164308 ERAP2 L-RAP|LRAP endoplasmic reticulum aminopeptidase 2 protein-coding chr1-2813 chr1 24743494 24743704 + 16.8 0.000 Intergenic MIRb|SINE|MIR -1848 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr7-1284 chr7 2299109 2299319 + 16.8 0.000 intron (NM_013321, intron 1 of 10) intron (NM_013321, intron 1 of 10) 15227 NM_013321 29886 Hs.584900 NM_013321 ENSG00000106266 SNX8 Mvp1 sorting nexin 8 protein-coding chr10-1260 chr10 119375660 119375870 + 16.8 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -2207 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr18-659 chr18 47343358 47343568 + 16.8 0.000 intron (NR_147192, intron 1 of 2) MER21C|LTR|ERVL -37033 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr20-814 chr20 44967490 44967700 + 16.8 0.000 intron (NR_147974, intron 1 of 3) intron (NR_147974, intron 1 of 3) 1083 NR_147974 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding chr6-1022 chr6 106451592 106451802 + 16.8 0.000 exon (NM_001371242, exon 2 of 22) exon (NM_001371242, exon 2 of 22) 5551 NR_134603 105377924 Hs.741855 NR_134603 ENSG00000282408 LOC105377924 - uncharacterized LOC105377924 ncRNA chr4-971 chr4 56703416 56703626 + 16.8 0.000 Intergenic Intergenic -21815 NM_001145460 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding chr7-1744 chr7 32163560 32163770 + 16.8 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -92229 NM_001322057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr12-2510 chr12 89208764 89208974 + 16.8 0.000 Intergenic Intergenic 143632 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr4-1379 chr4 98654535 98654745 + 16.8 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 3971 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr1-1830 chr1 1198943 1199153 + 16.8 0.000 Intergenic Intergenic 7544 NM_148902 8784 Hs.212680 NM_004195 ENSG00000186891 TNFRSF18 AITR|CD357|ENERGEN|GITR|GITR-D TNF receptor superfamily member 18 protein-coding chr2-1643 chr2 28681213 28681423 + 16.7 0.000 Intergenic MIRb|SINE|MIR 54887 NR_145832 100505774 Hs.595909 NR_145832 ENSG00000226833 LOC100505774 - uncharacterized LOC100505774 ncRNA chr8-357 chr8 102789208 102789418 + 16.7 0.000 Intergenic Intergenic -17509 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr1-1884 chr1 156383042 156383252 + 16.7 0.000 intron (NR_046115, intron 9 of 10) intron (NR_046115, intron 9 of 10) 13936 NR_146763 57127 Hs.131835 NM_020407 ENSG00000132677 RHBG SLC42A2 Rh family B glycoprotein (gene/pseudogene) protein-coding chr6-856 chr6 26322914 26323124 + 16.7 0.000 Intergenic Intergenic -37520 NM_003543 8365 Hs.591790 NM_003543 ENSG00000158406 HIST1H4H H4/h|H4FH histone cluster 1 H4 family member h protein-coding chr2-2649 chr2 178553162 178553372 + 16.7 0.000 exon (NM_133432, exon 164 of 192) exon (NM_133432, exon 164 of 192) 30076 NR_038271 100506866 Hs.710694 NR_038271 ENSG00000237298 TTN-AS1 - TTN antisense RNA 1 ncRNA chr9-1654 chr9 15927367 15927577 + 16.7 0.000 intron (NM_001355547, intron 24 of 24) intron (NM_001355547, intron 24 of 24) 325635 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr12-2553 chr12 108685694 108685904 + 16.7 0.000 intron (NM_001105237, intron 2 of 10) intron (NM_001105237, intron 2 of 10) 17199 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr16-686 chr16 31458395 31458605 + 16.7 0.000 promoter-TSS (NM_001105247) promoter-TSS (NM_001105247) 196 NM_001288767 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding chr4-790 chr4 3489428 3489638 + 16.7 0.000 intron (NM_001363811, intron 3 of 7) intron (NM_001363811, intron 3 of 7) 4989 NM_001256896 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr7-1388 chr7 831741 831951 + 16.7 0.000 promoter-TSS (NM_001130965) promoter-TSS (NM_001130965) -630 NM_001130965 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr9-2236 chr9 16476166 16476376 + 16.7 0.000 intron (NM_001317939, intron 4 of 6) intron (NM_001317939, intron 4 of 6) -199958 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr3-736 chr3 119240742 119240952 + 16.7 0.000 promoter-TSS (NM_212543) promoter-TSS (NM_212543) 31 NM_212543 8702 Hs.13225 NM_003778 ENSG00000121578 B4GALT4 B4Gal-T4|beta4Gal-T4 beta-1,4-galactosyltransferase 4 protein-coding chrX-836 chrX 113742601 113742811 + 16.7 0.000 intron (NR_131204, intron 1 of 2) MamGypLTR2b|LTR|Gypsy 195512 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr19-1587 chr19 10593978 10594188 + 16.7 0.000 Intergenic Intergenic -6771 NM_001300887 10053 Hs.18894 NM_005498 ENSG00000129354 AP1M2 AP1-mu2|HSMU1B|MU-1B|MU1B|mu2 adaptor related protein complex 1 subunit mu 2 protein-coding chr10-853 chr10 73625823 73626033 + 16.7 0.000 promoter-TSS (NM_001350995) promoter-TSS (NM_001350995) 53 NM_001350995 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr4-1068 chr4 110020284 110020494 + 16.7 0.000 Intergenic Intergenic 107506 NM_001178131 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr19-805 chr19 8423919 8424129 + 16.7 0.000 intron (NR_163145, intron 2 of 3) intron (NR_163145, intron 2 of 3) 5672 NM_001369779 51257 Hs.631861 NM_016496 ENSG00000099785 MARCH2 HSPC240|MARCH-II|RNF172 membrane associated ring-CH-type finger 2 protein-coding chr19-1666 chr19 980143 980353 + 16.7 0.000 Intergenic Intergenic -4080 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr1-2732 chr1 16138669 16138879 + 16.7 0.000 intron (NM_004431, intron 3 of 16) intron (NM_004431, intron 3 of 16) 17295 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr17-1352 chr17 50479534 50479744 + 16.7 0.000 exon (NM_018346, exon 2 of 9) exon (NM_018346, exon 2 of 9) 779 NM_018346 55316 Hs.8033 NM_018346 ENSG00000136444 RSAD1 HemW radical S-adenosyl methionine domain containing 1 protein-coding chr15-791 chr15 60343366 60343576 + 16.7 0.000 Intergenic THE1D|LTR|ERVL-MaLR 54515 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr9-718 chr9 3894822 3895032 + 16.7 0.000 intron (NM_001042413, intron 7 of 10) intron (NM_001042413, intron 7 of 10) -3719 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr2-2548 chr2 213086073 213086283 + 16.7 0.000 intron (NM_001371277, intron 3 of 6) intron (NM_001371277, intron 3 of 6) 64259 NM_016260 22807 Hs.604950 NM_016260 ENSG00000030419 IKZF2 ANF1A2|HELIOS|ZNF1A2|ZNFN1A2 IKAROS family zinc finger 2 protein-coding chr7-1005 chr7 151754318 151754528 + 16.7 0.000 intron (NM_016203, intron 3 of 15) intron (NM_016203, intron 3 of 15) -18109 NM_001304527 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr14-760 chr14 95024069 95024279 + 16.7 0.000 Intergenic Intergenic 109329 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr1-2426 chr1 3464579 3464789 + 16.7 0.000 intron (NM_014448, intron 2 of 14) intron (NM_014448, intron 2 of 14) 10019 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr19-1507 chr19 49474063 49474273 + 16.7 0.000 promoter-TSS (NM_001278637) promoter-TSS (NM_001278637) -47 NM_001278637 2323 Hs.428 NM_001459 ENSG00000090554 FLT3LG FL|FLG3L|FLT3L fms related tyrosine kinase 3 ligand protein-coding chr19-1301 chr19 5067644 5067854 + 16.7 0.000 intron (NM_001370094, intron 6 of 10) intron (NM_001370094, intron 6 of 10) 98636 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr5-1297 chr5 15446634 15446844 + 16.7 0.000 Intergenic LTR88c|LTR|Gypsy? -53441 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chrX-213 chrX 112841465 112841675 + 16.7 0.000 promoter-TSS (NM_133265) promoter-TSS (NM_133265) -739 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chr9-1822 chr9 128883136 128883346 + 16.7 0.000 promoter-TSS (NM_001352988) promoter-TSS (NM_001352988) -718 NM_001352989 883 Hs.495250 NM_004059 ENSG00000171097 KYAT1 CCBL1|GTK|KAT1|KATI kynurenine aminotransferase 1 protein-coding chrX-175 chrX 111681654 111681864 + 16.7 0.000 5' UTR (NM_001257239, exon 1 of 4) 5' UTR (NM_001257239, exon 1 of 4) 102 NM_001257239 79868 Hs.443061 NM_018466 ENSG00000101901 ALG13 CDG1S|CXorf45|EIEE36|GLT28D1|MDS031|TDRD13|YGL047W ALG13 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr1-915 chr1 32703733 32703943 + 16.7 0.000 Intergenic Intergenic -1068 NM_001161708 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr1-1524 chr1 68173868 68174078 + 16.7 0.000 intron (NM_001193334, intron 1 of 10) intron (NM_001193334, intron 1 of 10) 9637 NR_031664 100302279 NR_031664 ENSG00000221203 MIR1262 MIRN1262|hsa-mir-1262|mir-1262 microRNA 1262 ncRNA chr15-391 chr15 41402342 41402552 + 16.7 0.000 promoter-TSS (NM_016013) promoter-TSS (NM_016013) 49 NM_016013 51103 Hs.106529 NM_016013 ENSG00000137806 NDUFAF1 CGI-65|CGI65|CIA30|MC1DN11 NADH:ubiquinone oxidoreductase complex assembly factor 1 protein-coding chr4-1638 chr4 89054518 89054728 + 16.7 0.000 intron (NM_014883, intron 1 of 23) LTR48|LTR|ERV1 2562 NM_014883 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr11-2319 chr11 66485444 66485654 + 16.7 0.000 intron (NM_130443, intron 3 of 17) intron (NM_130443, intron 3 of 17) 5115 NM_001256670 10072 Hs.502914 NM_005700 ENSG00000254986 DPP3 DPPIII dipeptidyl peptidase 3 protein-coding chr1-878 chr1 15847433 15847643 + 16.7 0.000 promoter-TSS (NM_015001) promoter-TSS (NM_015001) -169 NM_015001 23013 Hs.744843 NM_015001 ENSG00000065526 SPEN HIAA0929|MINT|RBM15C|SHARP spen family transcriptional repressor protein-coding chr9-1258 chr9 109254196 109254406 + 16.7 0.000 intron (NM_019114, intron 11 of 25) intron (NM_019114, intron 11 of 25) 66663 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr10-1378 chr10 30510828 30511038 + 16.7 0.000 Intergenic Intergenic 76287 NM_001320961 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding chr8-957 chr8 90001264 90001474 + 16.7 0.000 promoter-TSS (NM_001359) promoter-TSS (NM_001359) 17 NM_001330575 1666 Hs.492212 NM_001359 ENSG00000104325 DECR1 DECR|NADPH|SDR18C1 2,4-dienoyl-CoA reductase 1 protein-coding chr12-805 chr12 54188792 54189002 + 16.7 0.000 promoter-TSS (NM_001243789) promoter-TSS (NM_001243789) 60 NM_001351247 23583 Hs.632721 NM_014311 ENSG00000123415 SMUG1 FDG|HMUDG|UNG3 single-strand-selective monofunctional uracil-DNA glycosylase 1 protein-coding chr21-392 chr21 34874809 34875019 + 16.7 0.000 intron (NM_001001890, intron 2 of 5) intron (NM_001001890, intron 2 of 5) 13785 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr13-513 chr13 31476312 31476522 + 16.7 0.000 Intergenic Intergenic -263109 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr1-2030 chr1 163168148 163168358 + 16.7 0.000 intron (NR_110699, intron 2 of 3) intron (NR_110699, intron 2 of 3) 6578 NR_110699 101928404 Hs.683933 NR_110699 ENSG00000232892 LOC101928404 - uncharacterized LOC101928404 ncRNA chr1-2411 chr1 232963184 232963394 + 16.7 0.000 intron (NM_001329452, intron 3 of 3) intron (NM_001329452, intron 3 of 3) 12447 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr2-4060 chr2 113795649 113795859 + 16.7 0.000 Intergenic Intergenic -39112 NM_001330316 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr8-2610 chr8 59147840 59148050 + 16.7 0.000 Intergenic Intergenic 28735 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr9-1142 chr9 133707214 133707424 + 16.7 0.000 intron (NM_001134707, intron 11 of 20) intron (NM_001134707, intron 11 of 20) 31033 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr2-2204 chr2 67650943 67651153 + 16.7 0.000 Intergenic Intergenic 174514 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr12-815 chr12 127810140 127810350 + 16.7 0.000 Intergenic Intergenic -71372 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chr19-1089 chr19 37963202 37963412 + 16.7 0.000 intron (NM_015073, intron 1 of 21) L1M4a2|LINE|L1 56099 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr3-2384 chr3 177571988 177572198 + 16.7 0.000 intron (NR_047568, intron 2 of 3) intron (NR_047568, intron 2 of 3) 130172 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr3-848 chr3 31171164 31171374 + 16.7 0.000 Intergenic LTR16C|LTR|ERVL -9482 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr3-691 chr3 42651860 42652070 + 16.7 0.000 intron (NR_125400, intron 1 of 2) intron (NR_125400, intron 1 of 2) -1732 NM_145166 92999 Hs.409561 NM_145166 ENSG00000114853 ZBTB47 ZNF651 zinc finger and BTB domain containing 47 protein-coding chr7-723 chr7 151088948 151089158 + 16.7 0.000 intron (NM_001350103, intron 1 of 18) intron (NM_001350103, intron 1 of 18) 2578 NM_031946 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr3-1576 chr3 63655649 63655859 + 16.7 0.000 intron (NM_001348756, intron 2 of 4) intron (NM_001348756, intron 2 of 4) 3079 NM_001080537 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr6-384 chr6 43575997 43576207 + 16.7 0.000 promoter-TSS (NM_001291970) promoter-TSS (NM_001291970) -27 NR_144392 57510 Hs.203206 NM_020750 ENSG00000124571 XPO5 exp5 exportin 5 protein-coding chr13-942 chr13 97274765 97274975 + 16.7 0.000 intron (NM_144778, intron 1 of 8) intron (NM_144778, intron 1 of 8) 52537 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr2-2362 chr2 218532588 218532798 + 16.7 0.000 intron (NM_020935, intron 9 of 25) AluJb|SINE|Alu 35658 NM_020935 57695 Hs.166068 NM_020935 ENSG00000135913 USP37 - ubiquitin specific peptidase 37 protein-coding chr13-645 chr13 26299403 26299613 + 16.7 0.000 intron (NM_001318368, intron 1 of 12) Tigger3c|DNA|TcMar-Tigger 45379 NM_001346501 1024 Hs.382306 NM_001260 ENSG00000132964 CDK8 K35 cyclin dependent kinase 8 protein-coding chr12-1058 chr12 110281795 110282005 + 16.7 0.000 exon (NM_001681, exon 1 of 21) exon (NM_001681, exon 1 of 21) 653 NM_170665 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr16-950 chr16 80932261 80932471 + 16.7 0.000 Intergenic CpG -39770 NR_131947 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA chr2-2598 chr2 241935366 241935576 + 16.7 0.000 intron (NR_110220, intron 2 of 3) L1M4|LINE|L1 -32848 NR_135766 285095 Hs.85890 NR_135766 ENSG00000216921 LOC285095 - uncharacterized LOC285095 ncRNA chr3-1582 chr3 125374149 125374359 + 16.7 0.000 5' UTR (NM_001348432, exon 1 of 9) 5' UTR (NM_001348432, exon 1 of 9) 455 NM_001348424 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr2-2367 chr2 231696112 231696322 + 16.7 0.000 Intergenic L4_B_Mam|LINE|RTE-X -12308 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr13-398 chr13 79483415 79483625 + 16.7 0.000 intron (NM_019080, intron 1 of 7) intron (NM_019080, intron 1 of 7) -2289 NR_046685 100874208 Hs.602801 NR_046685 ENSG00000232132 NDFIP2-AS1 - NDFIP2 antisense RNA 1 ncRNA chr18-635 chr18 25262886 25263096 + 16.7 0.000 intron (NM_001308225, intron 2 of 6) intron (NM_001308225, intron 2 of 6) 89175 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr10-1030 chr10 110665033 110665243 + 16.7 0.000 intron (NM_001134363, intron 1 of 13) AluJr|SINE|Alu 20802 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr4-300 chr4 26861590 26861800 + 16.7 0.000 intron (NM_001169118, intron 1 of 12) intron (NM_001169118, intron 1 of 12) 854 NM_001169118 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chr2-340 chr2 28250200 28250410 + 16.7 0.000 intron (NM_199193, intron 11 of 13) L2b|LINE|L2 -43344 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr17-2148 chr17 42701399 42701609 + 16.7 0.000 3' UTR (NM_001321082, exon 20 of 20) 3' UTR (NM_001321082, exon 20 of 20) 6647 NR_106838 102466195 NR_106838 ENSG00000275273 MIR6780A hsa-mir-6780a microRNA 6780a ncRNA chr16-1598 chr16 30070186 30070396 + 16.7 0.000 3' UTR (NM_001243177, exon 10 of 10) 3' UTR (NM_001243177, exon 10 of 10) 4531 NM_001243177 226 Hs.513490 NM_000034 ENSG00000149925 ALDOA ALDA|GSD12|HEL-S-87p aldolase, fructose-bisphosphate A protein-coding chr10-1939 chr10 11546649 11546859 + 16.7 0.000 intron (NM_014688, intron 2 of 14) intron (NM_014688, intron 2 of 14) -14474 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr2-4466 chr2 232794276 232794486 + 16.7 0.000 intron (NM_015575, intron 14 of 30) intron (NM_015575, intron 14 of 30) -17816 NM_001172416 3769 Hs.467338 NM_002242 ENSG00000115474 KCNJ13 KIR1.4|KIR7.1|LCA16|SVD potassium voltage-gated channel subfamily J member 13 protein-coding chr11-1717 chr11 77348534 77348744 + 16.7 0.000 intron (NM_001128620, intron 9 of 15) intron (NM_001128620, intron 9 of 15) -46973 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr2-2888 chr2 214481296 214481506 + 16.7 0.000 intron (NM_001080500, intron 3 of 3) MLT1H|LTR|ERVL-MaLR -28781 NR_047698 100885780 Hs.665982 NR_047698 ENSG00000224257 VWC2L-IT1 - VWC2L intronic transcript 1 ncRNA chr3-946 chr3 173932744 173932954 + 16.7 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -12053 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chrX-162 chrX 155216247 155216457 + 16.7 0.000 promoter-TSS (NM_001303543) promoter-TSS (NM_001303543) -72 NM_001303545 7411 Hs.436803 NM_003372 ENSG00000155959 VBP1 HIBBJ46|PFD3|PFDN3|VBP-1 VHL binding protein 1 protein-coding chr17-1354 chr17 58352101 58352311 + 16.7 0.000 promoter-TSS (NM_003168) promoter-TSS (NM_003168) -5 NR_073470 6827 Hs.439481 NM_003168 ENSG00000213246 SUPT4H1 SPT4|SPT4H|SUPT4H|Supt4a SPT4 homolog, DSIF elongation factor subunit protein-coding chr16-1106 chr16 87956763 87956973 + 16.7 0.000 intron (NM_001173539, intron 1 of 12) intron (NM_001173539, intron 1 of 12) -3003 NM_001173542 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr12-536 chr12 3200393 3200603 + 16.7 0.000 intron (NM_006675, intron 2 of 8) CpG 123119 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr6-1268 chr6 54419961 54420171 + 16.7 0.000 Intergenic Intergenic 111625 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr2-1404 chr2 74201763 74201973 + 16.7 0.000 intron (NR_027405, intron 2 of 8) intron (NR_027405, intron 2 of 8) 3253 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr16-511 chr16 4548735 4548945 + 16.7 0.000 Intergenic AluSx|SINE|Alu -7650 NM_001145011 342346 Hs.684212 NM_001145011 ENSG00000205832 C16orf96 - chromosome 16 open reading frame 96 protein-coding chr7-1686 chr7 140609821 140610031 + 16.7 0.000 intron (NM_001318053, intron 1 of 13) HY1|scRNA|scRNA -7384 NR_134477 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding chr12-544 chr12 104049942 104050152 + 16.7 0.000 5' UTR (NM_001316967, exon 2 of 11) 5' UTR (NM_001316967, exon 2 of 11) 14130 NM_001316967 83468 Hs.631650 NM_031302 ENSG00000120820 GLT8D2 - glycosyltransferase 8 domain containing 2 protein-coding chr5-1219 chr5 132094782 132094992 + 16.7 0.000 Intergenic Intergenic 21098 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 CSF|GMCSF colony stimulating factor 2 protein-coding chr18-305 chr18 36315886 36316096 + 16.7 0.000 intron (NM_001281740, intron 1 of 28) intron (NM_001281740, intron 1 of 28) 18278 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr12-1190 chr12 95858751 95858961 + 16.7 0.000 promoter-TSS (NR_135014) promoter-TSS (NR_135014) -17 NR_135014 105369921 Hs.125549 NR_135014 ENSG00000258343 LOC105369921 - uncharacterized LOC105369921 ncRNA chr5-1354 chr5 32443430 32443640 + 16.7 0.000 intron (NM_016107, intron 2 of 19) intron (NM_016107, intron 2 of 19) 1205 NR_144318 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr3-1383 chr3 59050084 59050294 + 16.7 0.000 promoter-TSS (NM_001351531) promoter-TSS (NM_001351531) -157 NM_001351534 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr9-974 chr9 127505906 127506116 + 16.7 0.000 3' UTR (NM_001035534, exon 14 of 14) 3' UTR (NM_001035534, exon 14 of 14) 53756 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr10-1361 chr10 123621706 123621916 + 16.7 0.000 Intergenic Intergenic -44544 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr20-965 chr20 38273117 38273327 + 16.7 0.000 intron (NR_104170, intron 1 of 1) intron (NR_104170, intron 1 of 1) -12487 NM_001029864 85449 Hs.472690 NM_001029864 ENSG00000149633 KIAA1755 - KIAA1755 protein-coding chr3-1598 chr3 183765242 183765452 + 16.7 0.000 intron (NM_001351371, intron 15 of 21) intron (NM_001351371, intron 15 of 21) 45104 NR_046727 100874113 NR_046727 YEATS2-AS1 - YEATS2 antisense RNA 1 ncRNA chr8-1221 chr8 108442750 108442960 + 16.7 0.000 promoter-TSS (NM_001329493) promoter-TSS (NM_001329493) -728 NM_001329494 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr14-1163 chr14 51697797 51698007 + 16.7 0.000 intron (NM_001042481, intron 3 of 14) intron (NM_001042481, intron 3 of 14) -19381 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr4-1087 chr4 150569413 150569623 + 16.7 0.000 intron (NM_001367550, intron 40 of 56) intron (NM_001367550, intron 40 of 56) -9571 NR_149035 729558 Hs.647978 NR_149035 ENSG00000249690 LOC729558 - uncharacterized LOC729558 ncRNA chr20-232 chr20 45885070 45885280 + 16.7 0.000 TTS (NM_080603) TTS (NM_080603) 2447 NM_080608 128497 Hs.128235 NM_080608 ENSG00000149634 SPATA25 C20orf165|TSG23|dJ337O18.8 spermatogenesis associated 25 protein-coding chr20-612 chr20 8530193 8530403 + 16.7 0.000 intron (NM_182734, intron 3 of 32) L1M5|LINE|L1 281594 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr3-630 chr3 39152209 39152419 + 16.7 0.000 intron (NM_001320560, intron 1 of 4) L2b|LINE|L2 1277 NM_033027 64651 Hs.370950 NM_033027 ENSG00000144655 CSRNP1 AXUD1|CSRNP-1|FAM130B|TAIP-3|URAX1 cysteine and serine rich nuclear protein 1 protein-coding chr12-2528 chr12 97535775 97535985 + 16.7 0.000 intron (NR_152618, intron 8 of 10) intron (NR_152618, intron 8 of 10) -27932 NR_029678 406926 NR_029678 ENSG00000207586 MIR135A2 MIRN135-2|MIRN135A2|mir-135a-2 microRNA 135a-2 ncRNA chr13-452 chr13 94154385 94154595 + 16.7 0.000 intron (NR_046535, intron 3 of 3) intron (NR_046535, intron 3 of 3) 33501 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr3-2390 chr3 183074336 183074546 + 16.7 0.000 intron (NR_120639, intron 2 of 15) intron (NR_120639, intron 2 of 15) 24802 NR_120640 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding chr18-331 chr18 24987284 24987494 + 16.7 0.000 non-coding (NR_146903, exon 1 of 2) non-coding (NR_146903, exon 1 of 2) 590 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr12-1195 chr12 104580015 104580225 + 16.7 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -11513 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr7-1823 chr7 116782484 116782694 + 16.7 0.000 intron (NM_000245, intron 18 of 20) intron (NM_000245, intron 18 of 20) -79998 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr12-973 chr12 26114043 26114253 + 16.7 0.000 Intergenic CpG 10889 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr3-3024 chr3 112102019 112102229 + 16.7 0.000 intron (NM_024616, intron 2 of 5) intron (NM_024616, intron 2 of 5) -10677 NR_030292 693152 NR_030292 ENSG00000207940 MIR567 MIRN567|hsa-mir-567 microRNA 567 ncRNA chr3-450 chr3 197002725 197002935 + 16.7 0.000 promoter-TSS (NR_038285) promoter-TSS (NR_038285) -76 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA chr13-884 chr13 35770821 35771031 + 16.7 0.000 3' UTR (NM_001330072, exon 17 of 17) 3' UTR (NM_001330072, exon 17 of 17) 73199 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr14-249 chr14 103847539 103847749 + 16.7 0.000 promoter-TSS (NR_038436) promoter-TSS (NR_038436) -69 NM_015316 23368 Hs.709297 NM_015316 ENSG00000088808 PPP1R13B ASPP1|p53BP2-like|p85 protein phosphatase 1 regulatory subunit 13B protein-coding chr1-1685 chr1 153507009 153507219 + 16.7 0.000 Intergenic Intergenic 28877 NM_014624 6277 Hs.275243 NM_014624 ENSG00000197956 S100A6 2A9|5B10|CABP|CACY|PRA|S10A6 S100 calcium binding protein A6 protein-coding chr20-789 chr20 58894910 58895120 + 16.7 0.000 intron (NR_132272, intron 1 of 3) intron (NR_132272, intron 1 of 3) 2852 NR_132272 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|PITA3|POH|SCG6|SgVI GNAS complex locus protein-coding chr1-1976 chr1 205775332 205775542 + 16.7 0.000 promoter-TSS (NM_003929) promoter-TSS (NM_003929) 45 NM_001135662 8934 Hs.115325 NM_003929 ENSG00000117280 RAB29 RAB7L|RAB7L1 RAB29, member RAS oncogene family protein-coding chr1-4495 chr1 22140535 22140745 + 16.7 0.000 intron (NM_030761, intron 1 of 4) intron (NM_030761, intron 1 of 4) 2457 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr13-568 chr13 35857807 35858017 + 16.7 0.000 intron (NM_001330071, intron 5 of 16) L2|LINE|L2 -2051 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr7-2013 chr7 42338234 42338444 + 16.7 0.000 Intergenic Intergenic -101130 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr17-1049 chr17 82435198 82435408 + 16.7 0.000 intron (NM_173620, intron 5 of 11) L1MB7|LINE|L1 14423 NM_001193655 79415 Hs.163113 NM_001033046 ENSG00000178927 CYBC1 C17orf62|Eros cytochrome b-245 chaperone 1 protein-coding chr21-217 chr21 41926522 41926732 + 16.7 0.000 promoter-TSS (NM_199050) promoter-TSS (NM_199050) 76 NM_199050 25966 Hs.473894 NM_015500 ENSG00000157617 C2CD2 C21orf25|C21orf258|TMEM24L C2 calcium dependent domain containing 2 protein-coding chr3-1490 chr3 117548342 117548552 + 16.7 0.000 Intergenic Intergenic 142478 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr5-1239 chr5 169626899 169627109 + 16.7 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -10271 NR_156756 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr1-3946 chr1 101259717 101259927 + 16.7 0.000 Intergenic Intergenic 23073 NM_001400 1901 Hs.154210 NM_001400 ENSG00000170989 S1PR1 CD363|CHEDG1|D1S3362|ECGF1|EDG-1|EDG1|S1P1 sphingosine-1-phosphate receptor 1 protein-coding chr16-1748 chr16 85097124 85097334 + 16.7 0.000 Intergenic Intergenic 15243 NM_198491 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr22-660 chr22 40406810 40407020 + 16.7 0.000 intron (NR_146415, intron 9 of 20) intron (NR_146415, intron 9 of 20) 36321 NM_001350047 27352 Hs.474914 NM_015705 ENSG00000100359 SGSM3 CIP85|MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5|rabGAPLP small G protein signaling modulator 3 protein-coding chr6-750 chr6 74638665 74638875 + 16.7 0.000 intron (NR_110856, intron 2 of 3) intron (NR_110856, intron 2 of 3) 490012 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr3-1261 chr3 177745063 177745273 + 16.7 0.000 intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -71697 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr9-1395 chr9 98075422 98075632 + 16.7 0.000 intron (NM_018946, intron 2 of 5) (GGTC)n|Simple_repeat|Simple_repeat 18795 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr3-2409 chr3 190718821 190719031 + 16.7 0.000 Intergenic Intergenic 143768 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr9-445 chr9 132241161 132241371 + 16.7 0.000 intron (NM_032536, intron 7 of 7) CpG 79208 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr6-1114 chr6 127642088 127642298 + 16.7 0.000 Intergenic L1MA4|LINE|L1 65019 NM_001010905 352999 Hs.226268 NM_001010905 ENSG00000184530 C6orf58 LEG1 chromosome 6 open reading frame 58 protein-coding chr2-1306 chr2 11688368 11688578 + 16.7 0.000 intron (NM_001349207, intron 1 of 20) intron (NM_001349207, intron 1 of 20) 10929 NM_001349208 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr13-436 chr13 100392880 100393090 + 16.7 0.000 intron (NR_148027, intron 20 of 23) MIRc|SINE|MIR 88030 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr1-2565 chr1 21936314 21936524 + 16.7 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 891 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr15-717 chr15 51727156 51727366 + 16.7 0.000 intron (NM_001143917, intron 1 of 2) LTR33|LTR|ERVL 9801 NM_001363969 256586 Hs.603629 NM_153374 ENSG00000140280 LYSMD2 - LysM domain containing 2 protein-coding chr11-1296 chr11 3855717 3855927 + 16.7 0.000 promoter-TSS (NR_039835) promoter-TSS (NR_039835) 119 NM_003156 6786 Hs.501735 NM_003156 ENSG00000167323 STIM1 D11S4896E|GOK|IMD10|STRMK|TAM|TAM1 stromal interaction molecule 1 protein-coding chr1-2831 chr1 53043404 53043614 + 16.7 0.000 intron (NM_001193600, intron 13 of 14) MIR|SINE|MIR -18543 NM_153703 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr11-1925 chr11 68150321 68150531 + 16.7 0.000 Intergenic Intergenic -29035 NM_212469 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr10-876 chr10 49177565 49177775 + 16.7 0.000 intron (NM_001288742, intron 1 of 4) intron (NM_001288742, intron 1 of 4) 10721 NM_001288740 170371 Hs.385493 NM_001010863 ENSG00000204161 TMEM273 C10orf128 transmembrane protein 273 protein-coding chr9-1513 chr9 78984944 78985154 + 16.7 0.000 Intergenic Intergenic 160617 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr16-1554 chr16 80299225 80299435 + 16.7 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -241404 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr11-1287 chr11 111446686 111446896 + 16.7 0.000 Intergenic Intergenic -28605 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr8-1113 chr8 89887922 89888132 + 16.7 0.000 Intergenic Intergenic -13841 NM_004337 734 Hs.436445 NM_004337 ENSG00000164823 OSGIN2 C8orf1|hT41 oxidative stress induced growth inhibitor family member 2 protein-coding chrX-846 chrX 122579660 122579870 + 16.7 0.000 Intergenic L1PREC2|LINE|L1 -604478 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr11-1669 chr11 11396333 11396543 + 16.7 0.000 intron (NM_001363464, intron 3 of 9) L3|LINE|CR1 -43188 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr19-1105 chr19 3397384 3397594 + 16.7 0.000 intron (NM_001245002, intron 2 of 10) intron (NM_001245002, intron 2 of 10) 30906 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr1-2320 chr1 152328634 152328844 + 16.7 0.000 intron (NR_103778, intron 2 of 6) intron (NR_103778, intron 2 of 6) -3536 NM_002016 2312 Hs.654510 NM_002016 ENSG00000143631 FLG ATOD2 filaggrin protein-coding chr13-869 chr13 24459310 24459520 + 16.7 0.000 intron (NM_006437, intron 18 of 33) intron (NM_006437, intron 18 of 33) 53363 NM_006437 143 Hs.744855 NM_006437 ENSG00000102699 PARP4 ADPRTL1|ARTD4|PARP-4|PARPL|PH5P|VAULT3|VPARP|VWA5C|p193 poly(ADP-ribose) polymerase family member 4 protein-coding chr19-3173 chr19 41378894 41379104 + 16.7 0.000 intron (NM_001369862, intron 2 of 4) AluJb|SINE|Alu 1735 NM_001042595 641649 Hs.709417 NM_001042595 ENSG00000142046 TMEM91 DSPC3|IFITMD6 transmembrane protein 91 protein-coding chr2-2650 chr2 182456815 182457025 + 16.7 0.000 intron (NM_005019, intron 1 of 14) MER20B|DNA|hAT-Charlie -29872 NM_001258313 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr13-589 chr13 110017430 110017640 + 16.7 0.000 Intergenic Intergenic -35750 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr3-2061 chr3 161957619 161957829 + 16.7 0.000 Intergenic Intergenic 460916 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr16-2149 chr16 47475838 47476048 + 16.7 0.000 intron (NM_001031835, intron 2 of 31) AluJr|SINE|Alu 14612 NM_001031835 5257 Hs.78060 NM_000293 ENSG00000102893 PHKB - phosphorylase kinase regulatory subunit beta protein-coding chr7-498 chr7 5556143 5556353 + 16.7 0.000 Intergenic CpG -25647 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr4-869 chr4 119735339 119735549 + 16.7 0.000 Intergenic Intergenic 69071 NR_110660 101927007 Hs.143958 NR_110660 ENSG00000250772 LINC01365 - long intergenic non-protein coding RNA 1365 ncRNA chr17-1387 chr17 4536639 4536849 + 16.7 0.000 intron (NM_001124758, intron 11 of 12) (TCTCCTT)n|Simple_repeat|Simple_repeat 18640 NM_014520 10514 Hs.22824 NM_014520 ENSG00000132382 MYBBP1A P160|PAP2|Pol5 MYB binding protein 1a protein-coding chr12-1481 chr12 12870640 12870850 + 16.7 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -4732 NR_003932 387841 Hs.631728 NR_003932 ENSG00000234498 RPL13AP20 RPL13A_9_1211 ribosomal protein L13a pseudogene 20 pseudo chr10-2611 chr10 78867490 78867700 + 16.7 0.000 Intergenic Intergenic 199853 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr19-830 chr19 5293463 5293673 + 16.7 0.000 intron (NM_002850, intron 1 of 37) CpG 47244 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr2-1640 chr2 24314130 24314340 + 16.7 0.000 intron (NM_001348182, intron 3 of 38) LTR40c|LTR|ERVL 46301 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr17-1383 chr17 82804821 82805031 + 16.7 0.000 intron (NM_005993, intron 9 of 38) MIRb|SINE|MIR 35096 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr9-1287 chr9 34702148 34702358 + 16.7 0.000 Intergenic Intergenic 7883 NM_002989 6366 Hs.57907 NM_002989 ENSG00000137077 CCL21 6Ckine|CKb9|ECL|SCYA21|SLC|TCA4 C-C motif chemokine ligand 21 protein-coding chr16-1085 chr16 66619207 66619417 + 16.7 0.000 3' UTR (NM_181521, exon 4 of 4) 3' UTR (NM_181521, exon 4 of 4) 14581 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr19-2267 chr19 57269493 57269703 + 16.7 0.000 intron (NR_136529, intron 2 of 2) MER74B|LTR|ERVL -10369 NM_001330622 10794 Hs.99971 NM_006635 ENSG00000197714 ZNF460 HZF8|ZNF272 zinc finger protein 460 protein-coding chr19-1404 chr19 40777367 40777577 + 16.7 0.000 promoter-TSS (NR_037791) promoter-TSS (NR_037791) -747 NR_037791 100529264 Hs.631539 NR_037791 RAB4B-EGLN2 EGLN2|EIT-6|EIT6|HIF-PH1|HPH-1|HPH-3|PHD1|RERT-lncRNA RAB4B-EGLN2 readthrough (NMD candidate) ncRNA chr2-1362 chr2 1613728 1613938 + 16.7 0.000 Intergenic Intergenic 130682 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr6-931 chr6 52389580 52389790 + 16.7 0.000 intron (NM_133367, intron 1 of 1) intron (NM_133367, intron 1 of 1) 27534 NM_133367 85315 Hs.239388 NM_133367 ENSG00000170915 PAQR8 C6orf33|LMPB1|MPRB progestin and adipoQ receptor family member 8 protein-coding chr6-1695 chr6 17165638 17165848 + 16.7 0.000 Intergenic Intergenic 63485 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr5-1730 chr5 149796677 149796887 + 16.7 0.000 intron (NM_001172699, intron 1 of 10) L2a|LINE|L2 24842 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr1-748 chr1 151511244 151511454 + 16.7 0.000 promoter-TSS (NM_020770) promoter-TSS (NM_020770) -38 NM_020770 57530 Hs.591464 NM_020770 ENSG00000143375 CGN - cingulin protein-coding chr1-1875 chr1 110615794 110616004 + 16.7 0.000 intron (NM_001204269, intron 1 of 4) intron (NM_001204269, intron 1 of 4) -9541 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr4-736 chr4 39825764 39825974 + 16.7 0.000 intron (NM_001100399, intron 32 of 32) AluJo|SINE|Alu 127733 NM_001312647 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr12-1652 chr12 47781828 47782038 + 16.7 0.000 TTS (NM_001368046) TTS (NM_001368046) 8695 NM_017842 55652 Hs.438867 NM_017842 ENSG00000211584 SLC48A1 HRG-1|HRG1|hHRG-1 solute carrier family 48 member 1 protein-coding chr20-238 chr20 62926337 62926547 + 16.7 0.000 promoter-TSS (NM_001193369) promoter-TSS (NM_001193369) 63 NM_001193370 11083 Hs.517172 NM_022105 ENSG00000101191 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding chr6-745 chr6 42547452 42547662 + 16.7 0.000 Intergenic Intergenic -16465 NM_015255 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding chr12-1700 chr12 132500246 132500456 + 16.7 0.000 intron (NM_001142641, intron 1 of 16) MIR|SINE|MIR 10200 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr2-2847 chr2 145410096 145410306 + 16.7 0.000 Intergenic Intergenic 742234 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr6-788 chr6 133502711 133502921 + 16.7 0.000 intron (NR_109982, intron 8 of 8) intron (NR_109982, intron 8 of 8) 261317 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr15-660 chr15 64558849 64559059 + 16.7 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 59534 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr5-1514 chr5 142666328 142666538 + 16.7 0.000 intron (NM_001144935, intron 1 of 3) intron (NM_001144935, intron 1 of 3) 19247 NM_001354956 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr6-1172 chr6 55694243 55694453 + 16.7 0.000 Intergenic Intergenic -115134 NM_001042406 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr3-963 chr3 58537027 58537237 + 16.7 0.000 promoter-TSS (NM_003500) promoter-TSS (NM_003500) 58 NM_003500 8309 Hs.444959 NM_003500 ENSG00000168306 ACOX2 BCOX|BRCACOX|BRCOX|CBAS6|THCCox acyl-CoA oxidase 2 protein-coding chr8-161 chr8 63038694 63038904 + 16.7 0.000 promoter-TSS (NM_003878) promoter-TSS (NM_003878) 7 NM_003878 8836 Hs.78619 NM_003878 ENSG00000137563 GGH GH gamma-glutamyl hydrolase protein-coding chr4-536 chr4 15513572 15513782 + 16.7 0.000 intron (NM_001080522, intron 9 of 37) L1MC4|LINE|L1 43795 NM_001164720 57545 Hs.590928 NM_020785 ENSG00000048342 CC2D2A JBTS9|MKS6 coiled-coil and C2 domain containing 2A protein-coding chr17-1206 chr17 79793499 79793709 + 16.7 0.000 3' UTR (NM_020649, exon 5 of 5) 3' UTR (NM_020649, exon 5 of 5) 3473 NM_020649 57332 Hs.387258 NM_020649 ENSG00000141570 CBX8 PC3|RC1 chromobox 8 protein-coding chr20-597 chr20 41078503 41078713 + 16.7 0.000 intron (NM_003286, intron 5 of 20) intron (NM_003286, intron 5 of 20) 49786 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr2-2838 chr2 120856685 120856895 + 16.7 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 64509 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr13-734 chr13 100542833 100543043 + 16.7 0.000 intron (NM_001195087, intron 2 of 2) intron (NM_001195087, intron 2 of 2) -9136 NM_033110 87769 Hs.350868 NM_033110 ENSG00000134864 GGACT A2LD1 gamma-glutamylamine cyclotransferase protein-coding chr9-1871 chr9 91057158 91057368 + 16.7 0.000 Intergenic L1ME3Cz|LINE|L1 17869 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chrX-181 chrX 72126538 72126748 + 16.7 0.000 TTS (NM_001024455) TTS (NM_001024455) 5272 NM_001024455 340526 Hs.512180 NM_001024455 ENSG00000242732 RTL5 6430402L03Rik|MAR5|MART5|RGAG4|SIRH8 retrotransposon Gag like 5 protein-coding chr5-1085 chr5 57825229 57825439 + 16.7 0.000 Intergenic MIRb|SINE|MIR 73828 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr6-445 chr6 7910850 7911060 + 16.7 0.000 promoter-TSS (NM_001145549) promoter-TSS (NM_001145549) -167 NM_030810 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr1-1743 chr1 156445908 156446118 + 16.7 0.000 Intergenic Intergenic -16465 NR_135262 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr17-739 chr17 82781926 82782136 + 16.7 0.000 intron (NM_005993, intron 7 of 38) intron (NM_005993, intron 7 of 38) 29966 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr3-983 chr3 196988262 196988472 + 16.7 0.000 Intergenic Intergenic -14539 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA chr10-749 chr10 46283070 46283280 + 16.7 0.000 Intergenic CpG -1675 NR_160731 105378577 Hs.646293 NR_160731 LOC105378577 - uncharacterized LOC105378577 ncRNA chr8-972 chr8 106208793 106209003 + 16.7 0.000 Intergenic CR1_Mam|LINE|CR1 -61280 NM_001198533 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr12-499 chr12 2891262 2891472 + 16.7 0.000 intron (NM_003324, intron 1 of 10) CpG 476 NM_001160408 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 TUB like protein 3 protein-coding chr17-837 chr17 81533274 81533484 + 16.7 0.000 intron (NM_012418, intron 1 of 4) MLT1L|LTR|ERVL-MaLR 5002 NM_001077182 25794 Hs.118555 NM_012418 ENSG00000186765 FSCN2 RFSN|RP30 fascin actin-bundling protein 2, retinal protein-coding chr11-565 chr11 1764005 1764215 + 16.7 0.000 promoter-TSS (NM_001909) promoter-TSS (NM_001909) -183 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr2-1153 chr2 127156095 127156305 + 16.7 0.000 Intergenic LTR68|LTR|ERV1 -49046 NM_139345 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr18-324 chr18 9731438 9731648 + 16.7 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 23242 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr12-1027 chr12 50241991 50242201 + 16.7 0.000 intron (NM_016357, intron 2 of 10) intron (NM_016357, intron 2 of 10) -7884 NR_031625 100302220 NR_031625 ENSG00000221604 MIR1293 MIRN1293|hsa-mir-1293|mir-1293 microRNA 1293 ncRNA chr10-1410 chr10 101158009 101158219 + 16.7 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -16848 NR_130724 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr9-1137 chr9 126694257 126694467 + 16.7 0.000 intron (NM_001174146, intron 6 of 7) MIRb|SINE|MIR 79919 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr7-1195 chr7 47461317 47461527 + 16.7 0.000 intron (NM_022748, intron 4 of 30) HERV4_I-int|LTR|ERV1 3381 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr10-1044 chr10 51110802 51111012 + 16.7 0.000 intron (NM_006258, intron 1 of 17) intron (NM_006258, intron 1 of 17) 36420 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr1-3189 chr1 112716366 112716576 + 16.7 0.000 Intergenic Intergenic -1143 NM_005167 333926 Hs.655231 NM_005167 ENSG00000155367 PPM1J PP2CZ|PP2Czeta|PPP2CZ protein phosphatase, Mg2+/Mn2+ dependent 1J protein-coding chr2-1962 chr2 238155503 238155713 + 16.7 0.000 Intergenic Intergenic -3362 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr4-1588 chr4 15893983 15894193 + 16.7 0.000 Intergenic L1ME3A|LINE|L1 44652 NM_005130 9982 Hs.1690 NM_005130 ENSG00000137440 FGFBP1 FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17 fibroblast growth factor binding protein 1 protein-coding chr3-1852 chr3 104628269 104628479 + 16.7 0.000 Intergenic Intergenic -738339 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr13-665 chr13 84279205 84279415 + 16.7 0.000 intron (NR_046871, intron 3 of 6) L1ME1|LINE|L1 138708 NR_046871 100874128 Hs.578060 NR_046871 LINC00333 NCRNA00333 long intergenic non-protein coding RNA 333 ncRNA GL000225.1-6 GL000225.1 133692 133902 + 16.7 0.000 NA NA NA NA chr4-954 chr4 882148 882358 + 16.7 0.000 intron (NM_005255, intron 14 of 27) intron (NM_005255, intron 14 of 27) 50063 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr1-1502 chr1 15714554 15714764 + 16.7 0.000 intron (NM_015164, intron 1 of 19) intron (NM_015164, intron 1 of 19) -21599 NM_207348 284723 Hs.631867 NM_207348 ENSG00000162461 SLC25A34 - solute carrier family 25 member 34 protein-coding chr16-473 chr16 2268397 2268607 + 16.7 0.000 promoter-TSS (NM_080594) promoter-TSS (NM_080594) -161 NR_132988 106660606 Hs.729989 NR_132988 ENSG00000260778 LOC106660606 - uncharacterized LOC106660606 ncRNA chr7-1210 chr7 79868118 79868328 + 16.7 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -266608 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr3-1923 chr3 183774608 183774818 + 16.7 0.000 intron (NM_001351371, intron 17 of 21) intron (NM_001351371, intron 17 of 21) 35738 NR_046727 100874113 NR_046727 YEATS2-AS1 - YEATS2 antisense RNA 1 ncRNA chr15-580 chr15 49270972 49271182 + 16.7 0.000 intron (NM_001289030, intron 6 of 10) intron (NM_001289030, intron 6 of 10) 100830 NM_002044 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr7-826 chr7 47441954 47442164 + 16.7 0.000 intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 22744 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr16-533 chr16 89369886 89370096 + 16.7 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) 48858 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr7-1061 chr7 158821227 158821437 + 16.7 0.000 intron (NM_020728, intron 1 of 21) intron (NM_020728, intron 1 of 21) 8177 NM_001367773 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr9-737 chr9 134570437 134570647 + 16.7 0.000 Intergenic Intergenic -71263 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr2-1355 chr2 234252069 234252279 + 16.7 0.000 Intergenic Intergenic 201472 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr6-1220 chr6 88725331 88725541 + 16.7 0.000 intron (NM_001286428, intron 11 of 13) HERVIP10FH-int|LTR|ERV1 -186067 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr15-522 chr15 42548115 42548325 + 16.7 0.000 promoter-TSS (NM_001130447) promoter-TSS (NM_001130447) 573 NM_153260 255252 Hs.234681 NM_153260 ENSG00000180979 LRRC57 - leucine rich repeat containing 57 protein-coding chr3-2026 chr3 63625214 63625424 + 16.7 0.000 Intergenic Intergenic -27356 NM_001348756 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr7-1478 chr7 117269528 117269738 + 16.7 0.000 Intergenic Intergenic 53425 NR_024047 7472 Hs.567356 NM_003391 ENSG00000105989 WNT2 INT1L1|IRP Wnt family member 2 protein-coding chr11-953 chr11 45771922 45772132 + 16.7 0.000 non-coding (NR_027134, exon 2 of 2) non-coding (NR_027134, exon 2 of 2) 595 NR_027134 374387 Hs.632142 NM_199137 ENSG00000205106 LINC02716 DKFZp779M0652 long intergenic non-protein coding RNA 2716 ncRNA chr20-581 chr20 4297082 4297292 + 16.7 0.000 Intergenic Intergenic -47900 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr2-3154 chr2 195861825 195862035 + 16.7 0.000 exon (NM_018897, exon 42 of 65) exon (NM_018897, exon 42 of 65) 204704 NM_020342 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr15-686 chr15 98659388 98659598 + 16.7 0.000 intron (NM_000875, intron 1 of 20) intron (NM_000875, intron 1 of 20) -8272 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr14-342 chr14 105300571 105300781 + 16.7 0.000 promoter-TSS (NM_001243127) promoter-TSS (NM_001243127) -98 NM_001243127 23241 Hs.525626 NM_015197 ENSG00000179364 PACS2 EIEE66|PACS-2|PACS1L phosphofurin acidic cluster sorting protein 2 protein-coding chr12-1323 chr12 57372445 57372655 + 16.7 0.000 intron (NM_001351217, intron 1 of 21) intron (NM_001351217, intron 1 of 21) -30094 NM_001351214 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr22-587 chr22 44497993 44498203 + 16.7 0.000 5' UTR (NM_032287, exon 1 of 2) 5' UTR (NM_032287, exon 1 of 2) 135 NM_032287 84247 Hs.744991 NM_032287 ENSG00000188636 RTL6 LDOC1L|Mar6|Mart6|SIRH3|dJ1033E15.2 retrotransposon Gag like 6 protein-coding chr14-1497 chr14 44339266 44339476 + 16.7 0.000 Intergenic Intergenic 167912 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr6-3147 chr6 111242518 111242728 + 16.7 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -16716 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr1-1538 chr1 202122677 202122887 + 16.7 0.000 promoter-TSS (NM_004767) promoter-TSS (NM_004767) -135 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr7-854 chr7 44116211 44116421 + 16.7 0.000 intron (NM_006230, intron 7 of 10) intron (NM_006230, intron 7 of 10) 5467 NR_039792 100616346 NR_039792 ENSG00000284412 MIR4649 mir-4649 microRNA 4649 ncRNA chr7-1315 chr7 120052979 120053189 + 16.7 0.000 Intergenic LTR4|LTR|ERV1 -145709 NR_131961 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr15-1033 chr15 93028791 93029001 + 16.7 0.000 TTS (NM_001271) TTS (NM_001271) 44260 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr13-340 chr13 41848842 41849052 + 16.7 0.000 intron (NM_001009814, intron 12 of 25) intron (NM_001009814, intron 12 of 25) 112138 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr17-1223 chr17 44326826 44327036 + 16.7 0.000 Intergenic Intergenic -2061 NM_016016 51629 Hs.744880 NM_016016 ENSG00000013306 SLC25A39 CGI-69|CGI69 solute carrier family 25 member 39 protein-coding chr1-2400 chr1 183676541 183676751 + 16.7 0.000 intron (NM_001297670, intron 1 of 17) L3|LINE|CR1 -23330 NM_203454 403314 Hs.97335 NM_203454 ENSG00000173627 APOBEC4 C1orf169 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 protein-coding chr12-1444 chr12 108846431 108846641 + 16.7 0.000 intron (NM_018984, intron 2 of 14) intron (NM_018984, intron 2 of 14) -9530 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA chr14-333 chr14 30622318 30622528 + 16.7 0.000 5' UTR (NM_001257376, exon 1 of 23) 5' UTR (NM_001257376, exon 1 of 23) 104 NM_001257376 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr6-670 chr6 107657984 107658194 + 16.7 0.000 intron (NM_018013, intron 6 of 6) intron (NM_018013, intron 6 of 6) 74061 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr2-2048 chr2 159996996 159997206 + 16.7 0.000 intron (NM_001007267, intron 11 of 26) L1MCa|LINE|L1 65514 NM_001007267 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr5-694 chr5 32391184 32391394 + 16.7 0.000 intron (NM_016107, intron 11 of 19) Tigger7|DNA|TcMar-Tigger 3186 NR_030305 693164 NR_030305 ENSG00000207956 MIR579 MIRN579|hsa-mir-579 microRNA 579 ncRNA chr8-866 chr8 94473199 94473409 + 16.7 0.000 intron (NM_012415, intron 1 of 14) intron (NM_012415, intron 1 of 14) 1811 NM_012415 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr1-2487 chr1 154627002 154627212 + 16.7 0.000 intron (NM_001365045, intron 1 of 14) intron (NM_001365045, intron 1 of 14) 864 NM_001025107 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr16-957 chr16 87364035 87364245 + 16.7 0.000 intron (NM_001282683, intron 2 of 9) intron (NM_001282683, intron 2 of 9) 19636 NM_024735 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr1-3230 chr1 183481224 183481434 + 16.7 0.000 intron (NM_001174061, intron 1 of 21) L2c|LINE|L2 8830 NM_201568 9887 Hs.591463 NM_014837 ENSG00000116698 SMG7 C1orf16|EST1C|SGA56M SMG7 nonsense mediated mRNA decay factor protein-coding chr9-1034 chr9 131524643 131524853 + 16.7 0.000 TTS (NR_148392) TTS (NR_148392) 6515 NM_031432 83549 Hs.9597 NM_031432 ENSG00000130717 UCK1 URK1 uridine-cytidine kinase 1 protein-coding chr11-1318 chr11 74018669 74018879 + 16.7 0.000 intron (NM_001286577, intron 32 of 32) intron (NM_001286577, intron 32 of 32) -9537 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr10-727 chr10 802034 802244 + 16.7 0.000 Intergenic AluJo|SINE|Alu -112471 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr3-1298 chr3 151976223 151976433 + 16.7 0.000 Intergenic Intergenic -48153 NR_110202 101928142 Hs.680207 NR_110202 AADACL2-AS1 - AADACL2 antisense RNA 1 ncRNA chr15-258 chr15 73052456 73052666 + 16.7 0.000 promoter-TSS (NM_001172623) promoter-TSS (NM_001172623) 77 NM_001172624 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr20-690 chr20 63946468 63946678 + 16.7 0.000 non-coding (NR_148435, exon 2 of 16) non-coding (NR_148435, exon 2 of 16) -3847 NR_030377 693232 NR_030377 ENSG00000207554 MIR647 MIRN647|hsa-mir-647 microRNA 647 ncRNA chr12-1047 chr12 88036804 88037014 + 16.7 0.000 intron (NM_001009894, intron 1 of 6) intron (NM_001009894, intron 1 of 6) 1373 NM_001009894 91298 Hs.591009 NM_001009894 ENSG00000133641 C12orf29 - chromosome 12 open reading frame 29 protein-coding chr2-805 chr2 73113464 73113674 + 16.7 0.000 promoter-TSS (NM_015470) promoter-TSS (NM_015470) -621 NM_015470 26056 Hs.24557 NM_015470 ENSG00000135631 RAB11FIP5 GAF1|RIP11|pp75 RAB11 family interacting protein 5 protein-coding chr11-930 chr11 61755211 61755421 + 16.7 0.000 promoter-TSS (NM_013279) promoter-TSS (NM_013279) -62 NM_013279 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr2-1396 chr2 64876418 64876628 + 16.7 0.000 Intergenic Intergenic -12892 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr10-1469 chr10 102461260 102461470 + 16.7 0.000 promoter-TSS (NM_024789) promoter-TSS (NM_024789) -30 NM_024789 79847 Hs.309069 NM_024789 ENSG00000138111 MFSD13A C10orf77|TMEM180|bA18I14.8 major facilitator superfamily domain containing 13A protein-coding chr4-653 chr4 152310268 152310478 + 16.7 0.000 Intergenic Intergenic -27282 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr2-1559 chr2 568212 568422 + 16.7 0.000 Intergenic Intergenic 10116 NR_136168 105373352 NR_136168 LOC105373352 - uncharacterized LOC105373352 ncRNA chr3-1493 chr3 119304211 119304421 + 16.7 0.000 intron (NM_020754, intron 1 of 11) intron (NM_020754, intron 1 of 11) 9933 NM_020754 57514 Hs.668218 NM_020754 ENSG00000031081 ARHGAP31 AOS1|CDGAP Rho GTPase activating protein 31 protein-coding chr2-1733 chr2 237590831 237591041 + 16.7 0.000 promoter-TSS (NR_033308) promoter-TSS (NR_033308) -202 NM_022449 64284 Hs.44278 NM_022449 ENSG00000124839 RAB17 - RAB17, member RAS oncogene family protein-coding chr8-707 chr8 127945266 127945476 + 16.7 0.000 intron (NR_003367, intron 3 of 8) L1ME3Cz|LINE|L1 3352 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr4-535 chr4 11748294 11748504 + 16.7 0.000 intron (NR_146995, intron 1 of 3) intron (NR_146995, intron 1 of 3) 21069 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr1-3153 chr1 70436737 70436947 + 16.6 0.000 intron (NM_001902, intron 10 of 11) intron (NM_001902, intron 10 of 11) 25574 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr12-1089 chr12 76158930 76159140 + 16.6 0.000 Intergenic Intergenic -74350 NM_001330231 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr5-1171 chr5 16540454 16540664 + 16.6 0.000 intron (NM_001034850, intron 3 of 8) intron (NM_001034850, intron 3 of 8) -31561 NM_019000 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr1-2512 chr1 208880507 208880717 + 16.6 0.000 Intergenic Intergenic -91842 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr8-1535 chr8 96592516 96592726 + 16.6 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -52621 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr14-272 chr14 65412401 65412611 + 16.6 0.000 promoter-TSS (NR_038170) promoter-TSS (NR_038170) 111 NR_024334 645431 Hs.713717 NR_024334 FUT8-AS1 - FUT8 antisense RNA 1 ncRNA chr4-1182 chr4 13559475 13559685 + 16.6 0.000 Intergenic Intergenic -11756 NR_015450 285548 Hs.529284 NR_015450 LINC01096 - long intergenic non-protein coding RNA 1096 ncRNA chr1-3040 chr1 3387282 3387492 + 16.6 0.000 intron (NM_022114, intron 4 of 16) intron (NM_022114, intron 4 of 16) -67278 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr18-579 chr18 9688505 9688715 + 16.6 0.000 Intergenic Intergenic -19691 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr2-1360 chr2 1055105 1055315 + 16.6 0.000 intron (NM_018968, intron 1 of 16) intron (NM_018968, intron 1 of 16) -103818 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr8-757 chr8 101090923 101091133 + 16.6 0.000 Intergenic L2b|LINE|L2 38974 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr10-2980 chr10 74023132 74023342 + 16.6 0.000 intron (NM_014000, intron 1 of 21) Tigger3a|DNA|TcMar-Tigger 25121 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr1-5221 chr1 192349587 192349797 + 16.6 0.000 intron (NM_001039152, intron 3 of 4) intron (NM_001039152, intron 3 of 4) 32700 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr18-162 chr18 79395900 79396110 + 16.6 0.000 promoter-TSS (NM_172388) promoter-TSS (NM_172388) 75 NM_001278669 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr6-1423 chr6 148251319 148251529 + 16.6 0.000 Intergenic Intergenic -20904 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr8-597 chr8 89902346 89902556 + 16.6 0.000 promoter-TSS (NM_001126111) promoter-TSS (NM_001126111) -119 NM_001126111 734 Hs.436445 NM_004337 ENSG00000164823 OSGIN2 C8orf1|hT41 oxidative stress induced growth inhibitor family member 2 protein-coding chr2-1067 chr2 235087911 235088121 + 16.6 0.000 Intergenic Intergenic 60281 NM_001371306 chr5-708 chr5 72441847 72442057 + 16.6 0.000 3' UTR (NM_152625, exon 5 of 5) 3' UTR (NM_152625, exon 5 of 5) 65458 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr8-1152 chr8 6250744 6250954 + 16.6 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 155699 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr10-774 chr10 6141320 6141530 + 16.6 0.000 Intergenic Intergenic -3496 NM_001145443 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr21-298 chr21 29181865 29182075 + 16.6 0.000 Intergenic Intergenic -11524 NR_027072 193629 Hs.720711 NM_138968 ENSG00000215533 LINC00189 C21orf109|NCRNA00189 long intergenic non-protein coding RNA 189 ncRNA chr16-887 chr16 87381391 87381601 + 16.6 0.000 intron (NM_001282683, intron 2 of 9) MIRc|SINE|MIR 2280 NM_024735 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr9-1794 chr9 16704264 16704474 + 16.6 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -22445 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr1-2715 chr1 234987441 234987651 + 16.6 0.000 Intergenic Intergenic -23547 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr14-771 chr14 32370790 32371000 + 16.6 0.000 intron (NM_004274, intron 1 of 13) intron (NM_004274, intron 1 of 13) 41597 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr2-1226 chr2 25362121 25362331 + 16.6 0.000 Intergenic Intergenic -19636 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr5-1312 chr5 73189078 73189288 + 16.6 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 12778 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr10-1350 chr10 112875996 112876206 + 16.6 0.000 Intergenic Intergenic 52605 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr9-627 chr9 6412917 6413127 + 16.6 0.000 promoter-TSS (NR_046386) promoter-TSS (NR_046386) -129 NR_046386 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr12-3750 chr12 43736911 43737121 + 16.6 0.000 intron (NM_001098615, intron 6 of 8) intron (NM_001098615, intron 6 of 8) 21774 NM_001098614 83448 Hs.23554 NM_031292 ENSG00000129317 PUS7L - pseudouridine synthase 7 like protein-coding chr1-3673 chr1 155981418 155981628 + 16.6 0.000 Intergenic Intergenic -1963 NM_001350112 9181 Hs.743352 NM_004723 ENSG00000116584 ARHGEF2 GEF|GEF-H1|GEFH1|LFP40|NEDMHM|P40 Rho/Rac guanine nucleotide exchange factor 2 protein-coding chr5-440 chr5 142025051 142025261 + 16.6 0.000 Intergenic Intergenic -12129 NM_005471 10007 Hs.633853 NM_005471 ENSG00000113552 GNPDA1 GNP1|GNPDA|GNPI|GPI|HLN glucosamine-6-phosphate deaminase 1 protein-coding chr1-2003 chr1 43147853 43148063 + 16.6 0.000 promoter-TSS (NM_001101376) promoter-TSS (NM_001101376) 54 NM_001101376 440585 Hs.657614 NM_001101376 ENSG00000186973 FAM183A - family with sequence similarity 183 member A protein-coding chr20-524 chr20 31604355 31604565 + 16.6 0.000 promoter-TSS (NM_181353) promoter-TSS (NM_181353) -829 NM_181353 3397 Hs.504609 NM_002165 ENSG00000125968 ID1 ID|bHLHb24 inhibitor of DNA binding 1, HLH protein protein-coding chr8-1069 chr8 102647834 102648044 + 16.6 0.000 TTS (NM_005655) TTS (NM_005655) 6025 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr15-838 chr15 50051959 50052169 + 16.6 0.000 intron (NR_073597, intron 3 of 26) intron (NR_073597, intron 3 of 26) 61315 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr11-1297 chr11 14499711 14499921 + 16.6 0.000 promoter-TSS (NM_001144062) promoter-TSS (NM_001144062) 42 NM_016451 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr2-2119 chr2 36701559 36701769 + 16.6 0.000 intron (NM_001177969, intron 1 of 14) intron (NM_001177969, intron 1 of 14) 4957 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr11-754 chr11 115623070 115623280 + 16.6 0.000 Intergenic Intergenic 111587 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr1-1983 chr1 235917565 235917775 + 16.6 0.000 Intergenic Intergenic -33957 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr16-679 chr16 89155292 89155502 + 16.6 0.000 non-coding (NR_147928, exon 12 of 12) non-coding (NR_147928, exon 12 of 12) -3823 NR_024347 283860 Hs.739138 NM_173617 ENSG00000180422 LINC00304 C16orf81|NCRNA00304 long intergenic non-protein coding RNA 304 ncRNA chr17-2023 chr17 17043652 17043862 + 16.6 0.000 intron (NM_201274, intron 1 of 23) intron (NM_201274, intron 1 of 23) 997 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr6-957 chr6 12485481 12485691 + 16.6 0.000 Intergenic Intergenic 99818 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr6-981 chr6 132147601 132147811 + 16.6 0.000 TTS (NR_146223) TTS (NR_146223) 13728 NR_038981 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr7-1234 chr7 134920022 134920232 + 16.6 0.000 intron (NM_033139, intron 1 of 12) intron (NM_033139, intron 1 of 12) 28669 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr6-1316 chr6 9116059 9116269 + 16.6 0.000 Intergenic Intergenic 463955 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr20-1032 chr20 40565130 40565340 + 16.6 0.000 Intergenic Intergenic 124001 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr11-1022 chr11 94933290 94933500 + 16.6 0.000 Intergenic Intergenic 40161 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr4-1423 chr4 40763186 40763396 + 16.6 0.000 intron (NM_024677, intron 4 of 11) intron (NM_024677, intron 4 of 11) 13336 NM_024677 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr22-725 chr22 36319732 36319942 + 16.6 0.000 intron (NM_002473, intron 9 of 40) intron (NM_002473, intron 9 of 40) -32930 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr16-1883 chr16 85002815 85003025 + 16.6 0.000 intron (NM_001145548, intron 1 of 8) intron (NM_001145548, intron 1 of 8) 8615 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr9-1295 chr9 91751971 91752181 + 16.6 0.000 intron (NM_001318204, intron 4 of 7) L1ME2z|LINE|L1 -115731 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr15-339 chr15 66842338 66842548 + 16.6 0.000 Intergenic Intergenic 114072 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr10-874 chr10 32954918 32955128 + 16.6 0.000 intron (NM_002211, intron 1 of 15) intron (NM_002211, intron 1 of 15) 2871 NM_133376 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr11-4172 chr11 57370301 57370511 + 16.6 0.000 3' UTR (NM_002559, exon 12 of 12) 3' UTR (NM_002559, exon 12 of 12) 10744 NM_006093 10394 Hs.251386 NM_006093 ENSG00000156575 PRG3 MBP2|MBPH proteoglycan 3, pro eosinophil major basic protein 2 protein-coding chr20-442 chr20 16574912 16575122 + 16.6 0.000 Intergenic CpG -1569 NM_024704 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr19-1785 chr19 47805016 47805226 + 16.6 0.000 Intergenic Intergenic -1517 NM_198479 284355 Hs.629812 NM_198479 ENSG00000178928 TPRX1 TPRX tetrapeptide repeat homeobox 1 protein-coding chr11-3251 chr11 73480870 73481080 + 16.6 0.000 intron (NM_001286051, intron 1 of 5) L2a|LINE|L2 104307 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr9-1524 chr9 124033070 124033280 + 16.6 0.000 3' UTR (NM_004789, exon 5 of 5) 3' UTR (NM_004789, exon 5 of 5) 21407 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr12-1197 chr12 109385408 109385618 + 16.6 0.000 Intergenic AluJb|SINE|Alu -3206 NM_001101421 283446 Hs.512008 NM_173597 ENSG00000174527 MYO1H - myosin IH protein-coding chr22-346 chr22 49724864 49725074 + 16.6 0.000 Intergenic CpG -67450 NM_001289922 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr14-665 chr14 64196720 64196930 + 16.6 0.000 intron (NM_015180, intron 99 of 114) intron (NM_015180, intron 99 of 114) -17319 NM_182913 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr1-1481 chr1 163069205 163069415 + 16.6 0.000 promoter-TSS (NM_001113381) promoter-TSS (NM_001113381) 56 NM_001113381 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G protein signaling 4 protein-coding chr2-1440 chr2 232589080 232589290 + 16.6 0.000 Intergenic ERVL-E-int|LTR|ERVL -16872 NM_001243252 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr1-1876 chr1 111191591 111191801 + 16.6 0.000 intron (NM_001271833, intron 8 of 11) intron (NM_001271833, intron 8 of 11) 8950 NM_024901 79961 Hs.557850 NM_024901 ENSG00000162777 DENND2D - DENN domain containing 2D protein-coding chr7-1628 chr7 22781518 22781728 + 16.6 0.000 Intergenic Intergenic 41226 NM_019059 54543 Hs.112318 NM_019059 ENSG00000196683 TOMM7 TOM7 translocase of outer mitochondrial membrane 7 protein-coding chr8-1888 chr8 23297194 23297404 + 16.6 0.000 3' UTR (NM_002318, exon 14 of 14) 3' UTR (NM_002318, exon 14 of 14) 9191 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr4-816 chr4 122914524 122914734 + 16.6 0.000 intron (NM_198041, intron 2 of 4) MIRb|SINE|MIR 7968 NM_007083 11162 Hs.558459 NM_007083 ENSG00000170917 NUDT6 ASFGF2|FGF-AS|FGF2AS|GFG-1|GFG1 nudix hydrolase 6 protein-coding chr11-2064 chr11 74319225 74319435 + 16.6 0.000 intron (NR_120556, intron 3 of 6) L2b|LINE|L2 -7690 NM_001288748 283208 Hs.660541 NM_182904 ENSG00000149380 P4HA3 - prolyl 4-hydroxylase subunit alpha 3 protein-coding chr19-882 chr19 50148116 50148326 + 16.6 0.000 Intergenic CpG -7901 NR_024243 100170227 Hs.717309 NR_024243 SNAR-D - small NF90 (ILF3) associated RNA D snRNA chr2-1842 chr2 201707736 201707946 + 16.6 0.000 intron (NM_020919, intron 28 of 33) intron (NM_020919, intron 28 of 33) -9197 NM_033066 58538 Hs.63085 NM_033066 ENSG00000082126 MPP4 ALS2CR5|DLG6 membrane palmitoylated protein 4 protein-coding chr1-3020 chr1 246421663 246421873 + 16.6 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) -4356 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-3949 chr1 110118925 110119135 + 16.6 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 6587 NM_203412 164153 Hs.374027 NM_203412 ENSG00000186150 UBL4B - ubiquitin like 4B protein-coding chr8-602 chr8 127907943 127908153 + 16.6 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 40675 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr21-579 chr21 15799662 15799872 + 16.6 0.000 exon (NM_001283041, exon 6 of 26) exon (NM_001283041, exon 6 of 26) 69785 NM_001283042 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr4-821 chr4 137705568 137705778 + 16.6 0.000 Intergenic Intergenic 159942 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr5-670 chr5 172984370 172984580 + 16.6 0.000 intron (NM_003945, intron 1 of 3) intron (NM_003945, intron 1 of 3) 704 NM_003945 8992 Hs.484188 NM_003945 ENSG00000113732 ATP6V0E1 ATP6H|ATP6V0E|M9.2|Vma21|Vma21p ATPase H+ transporting V0 subunit e1 protein-coding chr4-775 chr4 105088159 105088369 + 16.6 0.000 Intergenic Intergenic -57611 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr1-2409 chr1 228068442 228068652 + 16.6 0.000 Intergenic Intergenic 8003 NR_158166 100506571 NR_158166 LINC02809 - long intergenic non-protein coding RNA 2809 ncRNA chrX-287 chrX 65690510 65690720 + 16.6 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 22961 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr8-906 chr8 104400534 104400744 + 16.6 0.000 intron (NM_001385, intron 7 of 9) intron (NM_001385, intron 7 of 9) 60813 NM_030788 81501 Hs.652230 NM_030788 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding chr1-5065 chr1 97986543 97986753 + 16.6 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -44908 NR_146275 109729128 NR_146275 LINC01930 - long intergenic non-protein coding RNA 1930 ncRNA chr6-659 chr6 49463164 49463374 + 16.6 0.000 promoter-TSS (NM_018132) promoter-TSS (NM_018132) -16 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr4-604 chr4 168408782 168408992 + 16.6 0.000 intron (NM_001345927, intron 22 of 37) intron (NM_001345927, intron 22 of 37) 71605 NM_001345927 91351 Hs.535011 NM_001012967 ENSG00000181381 DDX60L - DExD/H-box 60 like protein-coding chr17-1284 chr17 1268455 1268665 + 16.6 0.000 Intergenic CpG -2004 NM_001164405 727857 Hs.723790 NM_001164405 ENSG00000205899 BHLHA9 BHLHF42|CCSPD basic helix-loop-helix family member a9 protein-coding chr14-823 chr14 103310739 103310949 + 16.6 0.000 Intergenic Intergenic -6440 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr4-1726 chr4 1227872 1228082 + 16.6 0.000 intron (NM_001012614, intron 4 of 9) intron (NM_001012614, intron 4 of 9) 17857 NR_104331 285463 Hs.707614 NR_104331 ENSG00000280927 CTBP1-AS PCAT10 CTBP1 antisense RNA ncRNA chr9-505 chr9 114398304 114398514 + 16.6 0.000 Intergenic CpG -4004 NM_030767 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding chr14-884 chr14 102280664 102280874 + 16.6 0.000 intron (NR_148554, intron 2 of 8) intron (NR_148554, intron 2 of 8) 24395 NM_001353831 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr3-3664 chr3 138049207 138049417 + 16.6 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 39147 NM_016369 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr19-2224 chr19 42613217 42613427 + 16.6 0.000 intron (NR_073180, intron 2 of 2) LTR49-int|LTR|ERV1 -18398 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr3-2207 chr3 19898930 19899140 + 16.6 0.000 intron (NM_001330688, intron 9 of 14) intron (NM_001330688, intron 9 of 14) 35182 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding chr6-476 chr6 37630467 37630677 + 16.6 0.000 TTS (NM_153487) TTS (NM_153487) 67311 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr19-1352 chr19 45607261 45607471 + 16.6 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -5154 NM_005282 2828 Hs.17170 NM_005282 ENSG00000177464 GPR4 - G protein-coupled receptor 4 protein-coding chr1-1398 chr1 207822730 207822940 + 16.6 0.000 promoter-TSS (NR_135298) promoter-TSS (NR_135298) -132 NR_135299 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chr15-593 chr15 96181770 96181980 + 16.6 0.000 intron (NR_125738, intron 3 of 4) intron (NR_125738, intron 3 of 4) -54034 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr1-2081 chr1 43494090 43494300 + 16.6 0.000 Intergenic L1MEb|LINE|L1 -31842 NM_001329138 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr6-759 chr6 121522365 121522575 + 16.6 0.000 Intergenic Intergenic 86824 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr4-1273 chr4 52029152 52029362 + 16.6 0.000 intron (NM_000232, intron 3 of 5) intron (NM_000232, intron 3 of 5) -8894 NM_001024611 339977 Hs.661450 NM_001024611 ENSG00000188993 LRRC66 - leucine rich repeat containing 66 protein-coding chr11-620 chr11 65014456 65014666 + 16.6 0.000 intron (NM_001667, intron 1 of 4) CpG 401 NM_001199745 402 Hs.502836 NM_001667 ENSG00000213465 ARL2 ARFL2 ADP ribosylation factor like GTPase 2 protein-coding chr15-581 chr15 60752677 60752887 + 16.6 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 71213 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr11-763 chr11 68903889 68904099 + 16.6 0.000 promoter-TSS (NM_181514) promoter-TSS (NM_181514) 143 NM_002180 3508 Hs.503048 NM_002180 ENSG00000132740 IGHMBP2 CATF1|CMT2S|HCSA|HMN6|SMARD1|SMUBP2|ZFAND7 immunoglobulin mu DNA binding protein 2 protein-coding chr19-899 chr19 41912978 41913188 + 16.6 0.000 intron (NM_001365103, intron 1 of 5) CpG-14575 15638 NM_001365103 390937 Hs.590950 NM_001365103 ENSG00000268041 LOC390937 - ETS domain-containing transcription factor ERF protein-coding chr12-835 chr12 65742725 65742935 + 16.6 0.000 Intergenic Intergenic -81630 NM_003484 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding chr3-772 chr3 186930216 186930426 + 16.6 0.000 promoter-TSS (NM_173217) promoter-TSS (NM_173217) -205 NM_173216 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr16-931 chr16 19086715 19086925 + 16.6 0.000 Intergenic CpG 18173 NM_001370491 10229 Hs.157113 NM_016138 ENSG00000167186 COQ7 CAT5|CLK-1|CLK1|COQ10D8 coenzyme Q7, hydroxylase protein-coding chr14-799 chr14 73790530 73790740 + 16.6 0.000 intron (NR_109995, intron 2 of 2) intron (NR_109995, intron 2 of 2) 3275 NR_109995 100506476 Hs.287299 NR_109995 LOC100506476 - uncharacterized LOC100506476 ncRNA chr6-455 chr6 134178435 134178645 + 16.6 0.000 promoter-TSS (NM_001143677) promoter-TSS (NM_001143677) -679 NM_001143677 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr5-1659 chr5 14739634 14739844 + 16.6 0.000 intron (NM_054027, intron 8 of 11) MIR3|SINE|MIR 27045 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr14-777 chr14 49600186 49600396 + 16.6 0.000 intron (NM_152329, intron 1 of 3) intron (NM_152329, intron 1 of 3) 1351 NM_152329 122769 Hs.451090 NM_152329 ENSG00000165501 LRR1 4-1BBLRR|LRR-1|PPIL5 leucine rich repeat protein 1 protein-coding chr1-1885 chr1 161198911 161199121 + 16.6 0.000 promoter-TSS (NM_004550) promoter-TSS (NM_004550) 38 NM_001320336 9507 Hs.211604 NM_005099 ENSG00000158859 ADAMTS4 ADAMTS-2|ADAMTS-4|ADMP-1 ADAM metallopeptidase with thrombospondin type 1 motif 4 protein-coding chr7-2138 chr7 40827126 40827336 + 16.6 0.000 intron (NM_024728, intron 14 of 14) intron (NM_024728, intron 14 of 14) 152708 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr11-1003 chr11 10406238 10406448 + 16.6 0.000 intron (NR_103765, intron 2 of 3) intron (NR_103765, intron 2 of 3) -43978 NM_001172431 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr3-1848 chr3 101574885 101575095 + 16.6 0.000 intron (NR_135231, intron 1 of 2) intron (NR_135231, intron 1 of 2) 810 NM_020357 57092 Hs.732633 NM_020357 ENSG00000081154 PCNP - PEST proteolytic signal containing nuclear protein protein-coding chr8-1126 chr8 116517603 116517813 + 16.6 0.000 Intergenic Intergenic -134392 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr14-487 chr14 71733387 71733597 + 16.6 0.000 intron (NM_001354286, intron 21 of 24) intron (NM_001354286, intron 21 of 24) 147194 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr5-1149 chr5 154191921 154192131 + 16.6 0.000 intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 1293 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr3-1309 chr3 185732878 185733088 + 16.6 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) 19731 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr10-2066 chr10 99689612 99689822 + 16.6 0.000 intron (NM_001349962, intron 8 of 13) L1MC5a|LINE|L1 30088 NM_001349963 57089 Hs.28326 NM_020354 ENSG00000198018 ENTPD7 LALP1 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding chrX-571 chrX 54066960 54067170 + 16.6 0.000 Intergenic Intergenic -21929 NM_001184896 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr20-512 chr20 3807502 3807712 + 16.6 0.000 promoter-TSS (NR_109859) promoter-TSS (NR_109859) -887 NR_109859 101929125 Hs.744106 NR_109859 ENSG00000275491 LINC01730 - long intergenic non-protein coding RNA 1730 ncRNA chr14-734 chr14 105315579 105315789 + 16.6 0.000 promoter-TSS (NM_001242787) promoter-TSS (NM_001242787) -107 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr12-1777 chr12 96051838 96052048 + 16.6 0.000 Intergenic Intergenic -8423 NM_001256643 4048 Hs.524648 NM_000895 ENSG00000111144 LTA4H - leukotriene A4 hydrolase protein-coding chr2-1610 chr2 173402411 173402621 + 16.6 0.000 Intergenic Intergenic 47644 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr1-2519 chr1 228071365 228071575 + 16.6 0.000 Intergenic Intergenic 5080 NR_158166 100506571 NR_158166 LINC02809 - long intergenic non-protein coding RNA 2809 ncRNA chr17-713 chr17 75404123 75404333 + 16.6 0.000 intron (NM_002086, intron 1 of 5) intron (NM_002086, intron 1 of 5) 1450 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr4-500 chr4 31458890 31459100 + 16.6 0.000 Intergenic LTR78B|LTR|ERV1 -47549 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr10-1533 chr10 77610405 77610615 + 16.6 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 27298 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr3-1413 chr3 157104633 157104843 + 16.6 0.000 intron (NR_034007, intron 1 of 3) intron (NR_034007, intron 1 of 3) 14857 NR_034008 100498859 Hs.633655 NR_034008 ENSG00000241135 LINC00881 - long intergenic non-protein coding RNA 881 ncRNA chr2-1909 chr2 160387954 160388164 + 16.6 0.000 intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) 19823 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr2-1940 chr2 218980007 218980217 + 16.6 0.000 TTS (NM_017521) TTS (NM_017521) 3828 NR_015390 151300 Hs.420716 NR_015390 LINC00608 - long intergenic non-protein coding RNA 608 ncRNA chr17-914 chr17 78360032 78360242 + 16.6 0.000 promoter-TSS (NM_003955) promoter-TSS (NM_003955) -58 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr20-532 chr20 41693486 41693696 + 16.6 0.000 Intergenic Intergenic -75214 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr15-1053 chr15 62850934 62851144 + 16.6 0.000 Intergenic Intergenic 27082 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr20-658 chr20 47352280 47352490 + 16.6 0.000 promoter-TSS (NR_134501) promoter-TSS (NR_134501) -176 NR_134501 101927377 Hs.668465 NR_134501 ENSG00000231119 LOC101927377 - uncharacterized LOC101927377 ncRNA chr14-752 chr14 69398124 69398334 + 16.6 0.000 promoter-TSS (NM_001252148) promoter-TSS (NM_001252148) 70 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr14-322 chr14 39432722 39432932 + 16.6 0.000 promoter-TSS (NM_203301) promoter-TSS (NM_203301) -327 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr6-999 chr6 16747366 16747576 + 16.6 0.000 intron (NR_152112, intron 1 of 1) intron (NR_152112, intron 1 of 1) 12713 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr2-1315 chr2 46915271 46915481 + 16.6 0.000 promoter-TSS (NM_001288953) promoter-TSS (NM_001288953) 430 NM_001171509 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr10-1440 chr10 48839211 48839421 + 16.6 0.000 intron (NM_020945, intron 39 of 61) intron (NM_020945, intron 39 of 61) 74919 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr2-974 chr2 30208514 30208724 + 16.6 0.000 Intergenic Intergenic 21185 NR_145719 109616960 NR_145719 ENSG00000207187 SNORA10B - small nucleolar RNA, H/ACA box 10B snoRNA chr15-1030 chr15 92082294 92082504 + 16.6 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 228095 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr22-751 chr22 24564687 24564897 + 16.6 0.000 intron (NR_103819, intron 2 of 2) intron (NR_103819, intron 2 of 2) 8793 NM_004175 6634 Hs.356549 NM_004175 ENSG00000100028 SNRPD3 SMD3|Sm-D3 small nuclear ribonucleoprotein D3 polypeptide protein-coding chr4-872 chr4 138981900 138982110 + 16.6 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 30641 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr22-676 chr22 19300031 19300241 + 16.6 0.000 Intergenic PRIMAX-int|LTR|ERV1 -8417 NM_007098 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr19-1446 chr19 12400450 12400660 + 16.6 0.000 5' UTR (NM_001322497, exon 1 of 4) 5' UTR (NM_001322497, exon 1 of 4) 425 NM_001322497 90576 Hs.546637 NM_203381 ENSG00000196466 ZNF799 HIT-40|ZNF842 zinc finger protein 799 protein-coding chr6-795 chr6 3355692 3355902 + 16.6 0.000 intron (NM_021945, intron 4 of 10) intron (NM_021945, intron 4 of 10) 89216 NM_021945 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr3-1341 chr3 124260579 124260789 + 16.6 0.000 intron (NM_001024660, intron 3 of 59) MER115|DNA|hAT-Tip100 -113648 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr3-1030 chr3 147946057 147946267 + 16.6 0.000 Intergenic Intergenic -131997 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr9-1735 chr9 126248766 126248976 + 16.6 0.000 Intergenic L1M8|LINE|L1 27044 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr15-584 chr15 65033150 65033360 + 16.6 0.000 Intergenic Intergenic -3616 NM_139242 123263 Hs.531615 NM_139242 ENSG00000103707 MTFMT COXPD15|FMT1|MC1DN27 mitochondrial methionyl-tRNA formyltransferase protein-coding chr7-1889 chr7 131235746 131235956 + 16.6 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 91928 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr3-2976 chr3 78825821 78826031 + 16.6 0.000 intron (NM_002941, intron 4 of 30) intron (NM_002941, intron 4 of 30) 193533 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr17-532 chr17 43546343 43546553 + 16.6 0.000 promoter-TSS (NM_001369366) promoter-TSS (NM_001369366) -108 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr9-2004 chr9 131234226 131234436 + 16.6 0.000 3' UTR (NM_001318325, exon 11 of 11) 3' UTR (NM_001318325, exon 11 of 11) 42179 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr5-930 chr5 1523098 1523308 + 16.6 0.000 intron (NM_024830, intron 1 of 13) CpG 757 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr4-1615 chr4 57053564 57053774 + 16.6 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -56093 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr3-1943 chr3 196807613 196807823 + 16.6 0.000 intron (NM_002577, intron 6 of 14) intron (NM_002577, intron 6 of 14) -60138 NM_001308045 205564 Hs.240770 NM_152699 ENSG00000119231 SENP5 - SUMO specific peptidase 5 protein-coding chr10-1123 chr10 125123899 125124109 + 16.6 0.000 intron (NM_001083914, intron 1 of 10) intron (NM_001083914, intron 1 of 10) 34773 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr10-1456 chr10 74238045 74238255 + 16.6 0.000 intron (NM_001369124, intron 3 of 9) Alu|SINE|Alu 61387 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr7-694 chr7 30750950 30751160 + 16.6 0.000 Intergenic Intergenic -1080 NR_037598 100526825 Hs.660192 NR_037598 ENSG00000254959 INMT-MINDY4 INMT-FAM188B INMT-MINDY4 readthrough (NMD candidate) ncRNA chr1-2863 chr1 181034141 181034351 + 16.6 0.000 intron (NM_001195035, intron 2 of 4) intron (NM_001195035, intron 2 of 4) 821 NM_001195000 3140 Hs.13500 NM_001531 ENSG00000153029 MR1 HLALS major histocompatibility complex, class I-related protein-coding chr19-1465 chr19 56110639 56110849 + 16.6 0.000 intron (NM_001002836, intron 1 of 2) intron (NM_001002836, intron 1 of 2) 10551 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr11-1953 chr11 123168328 123168538 + 16.6 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 26815 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr16-955 chr16 86227828 86228038 + 16.6 0.000 intron (NR_104139, intron 3 of 5) intron (NR_104139, intron 3 of 5) 31752 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr1-2870 chr1 196407834 196408044 + 16.6 0.000 intron (NM_001287820, intron 12 of 26) MER67D|LTR|ERV1 174542 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chr17-2144 chr17 40518264 40518474 + 16.6 0.000 Intergenic Intergenic -16746 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr6-640 chr6 108737898 108738108 + 16.6 0.000 Intergenic Charlie13a|DNA|hAT-Charlie -13651 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr5-1231 chr5 151739915 151740125 + 16.6 0.000 Intergenic Intergenic 18611 NM_004045 475 Hs.125213 NM_004045 ENSG00000177556 ATOX1 ATX1|HAH1 antioxidant 1 copper chaperone protein-coding chr1-2100 chr1 119330100 119330310 + 16.6 0.000 intron (NR_146623, intron 2 of 3) intron (NR_146623, intron 2 of 3) 1953 NR_146623 105378934 NR_146623 ENSG00000232650 LINC01780 - long intergenic non-protein coding RNA 1780 ncRNA chr6-1751 chr6 53250653 53250863 + 16.6 0.000 Intergenic Intergenic -26235 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr8-720 chr8 38797478 38797688 + 16.6 0.000 intron (NM_001352798, intron 2 of 12) intron (NM_001352798, intron 2 of 12) -7867 NM_001352802 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr10-593 chr10 124530302 124530512 + 16.6 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) 68584 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr1-2376 chr1 91608916 91609126 + 16.6 0.000 Intergenic Intergenic 107913 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr6-667 chr6 105346084 105346294 + 16.6 0.000 intron (NM_002726, intron 7 of 14) intron (NM_002726, intron 7 of 14) 56893 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr2-2899 chr2 220533519 220533729 + 16.6 0.000 Intergenic Intergenic -627059 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr1-2826 chr1 39391967 39392177 + 16.6 0.000 intron (NM_012090, intron 52 of 92) intron (NM_012090, intron 52 of 92) -17001 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr22-683 chr22 33851961 33852171 + 16.6 0.000 intron (NM_001362953, intron 1 of 14) MER90|LTR|ERV1 68362 NM_004737 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr7-1166 chr7 2099627 2099837 + 16.6 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -10680 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr13-655 chr13 45055777 45055987 + 16.6 0.000 Intergenic Intergenic -50397 NR_120424 101929259 Hs.638490 NR_120424 LOC101929259 - uncharacterized LOC101929259 ncRNA chr7-613 chr7 98252171 98252381 + 16.6 0.000 promoter-TSS (NM_015395) promoter-TSS (NM_015395) -44 NM_015395 25851 Hs.592281 NM_015395 ENSG00000205356 TECPR1 - tectonin beta-propeller repeat containing 1 protein-coding chr11-2339 chr11 75103640 75103850 + 16.6 0.000 Intergenic Intergenic -6855 NM_001005285 341152 Hs.554515 NM_001005285 ENSG00000171561 OR2AT4 OR11-265 olfactory receptor family 2 subfamily AT member 4 protein-coding chr3-1396 chr3 117629094 117629304 + 16.6 0.000 Intergenic Intergenic 61726 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr12-355 chr12 2959442 2959652 + 16.6 0.000 promoter-TSS (NM_201443) promoter-TSS (NM_201443) 150 NM_201441 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr6-1249 chr6 11316162 11316372 + 16.6 0.000 intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 66081 NM_001142393 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr15-1218 chr15 62706538 62706748 + 16.6 0.000 intron (NM_015059, intron 16 of 55) intron (NM_015059, intron 16 of 55) 59332 NM_015059 83660 Hs.569438 NM_015059 ENSG00000171914 TLN2 ILWEQ talin 2 protein-coding chr17-2068 chr17 67694454 67694664 + 16.6 0.000 3' UTR (NM_012417, exon 9 of 9) 3' UTR (NM_012417, exon 9 of 9) -23274 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr16-1279 chr16 67916739 67916949 + 16.6 0.000 intron (NM_006742, intron 2 of 2) intron (NM_006742, intron 2 of 2) 15018 NM_001907 1506 Hs.654546 NM_001907 ENSG00000141086 CTRL CTRL1 chymotrypsin like protein-coding chr20-555 chr20 47453253 47453463 + 16.6 0.000 Intergenic Arthur1C|DNA|hAT-Tip100 -41214 NR_146496 102723442 NR_146494 LINC01754 - long intergenic non-protein coding RNA 1754 ncRNA chr2-2283 chr2 36670988 36671198 + 16.6 0.000 Intergenic Intergenic -25597 NM_001177969 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr4-1327 chr4 147981438 147981648 + 16.6 0.000 intron (NM_024605, intron 18 of 22) L1PA17|LINE|L1 198948 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr2-2035 chr2 120695640 120695850 + 16.6 0.000 Intergenic Intergenic -40123 NM_001371271 chr17-933 chr17 80421369 80421579 + 16.6 0.000 intron (NR_148042, intron 2 of 7) intron (NR_148042, intron 2 of 7) 2056 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr7-1522 chr7 44036472 44036682 + 16.6 0.000 intron (NR_024116, intron 5 of 8) intron (NR_024116, intron 5 of 8) -2472 NR_072982 255031 Hs.633978 NR_015401 LINC00957 - long intergenic non-protein coding RNA 957 ncRNA chr5-1302 chr5 37840544 37840754 + 16.6 0.000 promoter-TSS (NM_000514) promoter-TSS (NM_000514) 211 NR_103441 100861519 Hs.536820 NM_001278094 GDNF-AS1 GDNFOS GDNF antisense RNA 1 ncRNA chr5-1058 chr5 134874316 134874526 + 16.6 0.000 5' UTR (NM_001350735, exon 1 of 5) 5' UTR (NM_001350735, exon 1 of 5) 651 NM_001350735 79770 Hs.741304 NM_024715 ENSG00000113621 TXNDC15 BUG|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding chrX-271 chrX 119574445 119574655 + 16.6 0.000 promoter-TSS (NM_001282161) promoter-TSS (NM_001282161) -13 NM_001282161 7319 Hs.379466 NM_003336 ENSG00000077721 UBE2A HHR6A|MRXS30|MRXSN|RAD6A|UBC2 ubiquitin conjugating enzyme E2 A protein-coding chr6-2306 chr6 107560743 107560953 + 16.6 0.000 intron (NM_018013, intron 4 of 6) intron (NM_018013, intron 4 of 6) 70731 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr3-2471 chr3 123757881 123758091 + 16.6 0.000 intron (NM_053025, intron 4 of 33) intron (NM_053025, intron 4 of 33) 68342 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr3-1900 chr3 150079067 150079277 + 16.6 0.000 Intergenic Intergenic -17271 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr2-4783 chr2 36452321 36452531 + 16.6 0.000 intron (NM_016441, intron 4 of 16) intron (NM_016441, intron 4 of 16) 96648 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr4-257 chr4 7103310 7103520 + 16.6 0.000 promoter-TSS (NR_027441) promoter-TSS (NR_027441) -39 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr2-931 chr2 85772374 85772584 + 16.6 0.000 intron (NM_032827, intron 2 of 2) CpG 11198 NR_106719 102466516 NR_106719 ENSG00000278783 MIR6071 hsa-mir-6071 microRNA 6071 ncRNA chr18-362 chr18 11947344 11947554 + 16.6 0.000 Intergenic Intergenic -34058 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr1-3252 chr1 203410248 203410458 + 16.6 0.000 Intergenic Intergenic -59231 NM_002023 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr2-5482 chr2 135227050 135227260 + 16.6 0.000 intron (NM_001286568, intron 14 of 20) intron (NM_001286568, intron 14 of 20) 90527 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr13-658 chr13 49669761 49669971 + 16.6 0.000 intron (NM_032565, intron 1 of 3) intron (NM_032565, intron 1 of 3) 21620 NM_032565 84650 Hs.433278 NM_032565 ENSG00000123179 EBPL EBRP EBP like protein-coding chr2-2512 chr2 171347686 171347896 + 16.6 0.000 intron (NM_001321158, intron 2 of 8) intron (NM_001321158, intron 2 of 8) 86199 NM_001321154 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr4-320 chr4 153249246 153249456 + 16.6 0.000 intron (NM_001302693, intron 1 of 2) CpG -8008 NM_001302694 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr2-1917 chr2 181106911 181107121 + 16.6 0.000 Intergenic Intergenic -16821 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA chr12-1113 chr12 29242269 29242479 + 16.6 0.000 intron (NM_001271784, intron 1 of 10) intron (NM_001271784, intron 1 of 10) 18708 NM_018099 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr10-917 chr10 97861391 97861601 + 16.6 0.000 intron (NM_001010917, intron 2 of 4) intron (NM_001010917, intron 2 of 4) 11653 NM_001010917 401647 Hs.567524 NM_001010917 ENSG00000155265 GOLGA7B C10orf132|C10orf133|bA451M19.3|bA459F3.4 golgin A7 family member B protein-coding chr16-937 chr16 51431656 51431866 + 16.6 0.000 Intergenic Intergenic -280489 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr2-1897 chr2 128305063 128305273 + 16.6 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 13700 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr3-780 chr3 48100984 48101194 + 16.6 0.000 Intergenic Intergenic -12241 NM_002375 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr8-933 chr8 38966397 38966607 + 16.6 0.000 intron (NM_021623, intron 10 of 11) intron (NM_021623, intron 10 of 11) -7726 NM_153692 203100 Hs.661014 NM_153692 ENSG00000169495 HTRA4 - HtrA serine peptidase 4 protein-coding chr12-2743 chr12 30725877 30726087 + 16.6 0.000 exon (NM_001319846, exon 10 of 19) exon (NM_001319846, exon 10 of 19) 28532 NM_001319842 65981 Hs.234355 NM_023925 ENSG00000110888 CAPRIN2 C1QDC1|EEG-1|EEG1|RNG140 caprin family member 2 protein-coding chr4-978 chr4 77699914 77700124 + 16.6 0.000 Intergenic Intergenic 119045 NM_001365007 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr3-1795 chr3 33202807 33203017 + 16.6 0.000 intron (NM_015551, intron 3 of 4) intron (NM_015551, intron 3 of 4) 15898 NM_015551 26032 Hs.196647 NM_015551 ENSG00000173705 SUSD5 - sushi domain containing 5 protein-coding chr1-4669 chr1 209850365 209850575 + 16.6 0.000 intron (NM_014388, intron 11 of 11) intron (NM_014388, intron 11 of 11) 22498 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 UTP25 C1orf107|DEF|DIEXF|DJ434O14.5 UTP25 small subunit processor component protein-coding chr10-2089 chr10 118032590 118032800 + 16.6 0.000 intron (NM_014904, intron 3 of 4) MER44B|DNA|TcMar-Tigger -14126 NR_026940 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA chr3-746 chr3 169812419 169812629 + 16.6 0.000 exon (NM_153353, exon 1 of 10) exon (NM_153353, exon 1 of 10) 380 NM_001363888 151827 Hs.591289 NM_153353 ENSG00000171757 LRRC34 - leucine rich repeat containing 34 protein-coding chr14-713 chr14 99968443 99968653 + 16.6 0.000 Intergenic Intergenic -2874 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr4-956 chr4 1773270 1773480 + 16.6 0.000 Intergenic Intergenic -19918 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr1-3998 chr1 162152471 162152681 + 16.6 0.000 intron (NM_014697, intron 1 of 9) intron (NM_014697, intron 1 of 9) -4531 NR_039798 100616386 NR_039798 ENSG00000266144 MIR4654 mir-4654 microRNA 4654 ncRNA chr13-692 chr13 33057480 33057690 + 16.6 0.000 intron (NM_004795, intron 3 of 4) intron (NM_004795, intron 3 of 4) 41162 NM_004795 9365 Hs.524953 NM_004795 ENSG00000133116 KL HFTC3 klotho protein-coding chr11-1579 chr11 126790679 126790889 + 16.6 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) 134698 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr10-1277 chr10 14405183 14405393 + 16.6 0.000 Intergenic Intergenic -22011 NR_036181 100422843 NR_036181 ENSG00000266321 MIR4293 - microRNA 4293 ncRNA chr1-1789 chr1 53684202 53684412 + 16.6 0.000 intron (NM_001367484, intron 2 of 10) L2b|LINE|L2 49897 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr15-414 chr15 74889806 74890016 + 16.6 0.000 promoter-TSS (NM_002435) promoter-TSS (NM_002435) -131 NM_002435 4351 Hs.75694 NM_002435 ENSG00000178802 MPI CDG1B|PMI|PMI1 mannose phosphate isomerase protein-coding chr22-726 chr22 36445433 36445643 + 16.6 0.000 Intergenic Intergenic 36102 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr2-1973 chr2 19711502 19711712 + 16.6 0.000 Intergenic UCON78|DNA|DNA -157247 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr1-2173 chr1 32063430 32063640 + 16.6 0.000 Intergenic Intergenic -8496 NM_001319677 55116 Hs.25544 NM_018056 ENSG00000121775 TMEM39B - transmembrane protein 39B protein-coding chr15-654 chr15 57112239 57112449 + 16.6 0.000 intron (NM_207038, intron 5 of 19) intron (NM_207038, intron 5 of 19) -107086 NM_001306220 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr12-788 chr12 51327018 51327228 + 16.6 0.000 Intergenic (CTCTT)n|Simple_repeat|Simple_repeat -2455 NM_001290007 51411 Hs.14770 NM_016293 ENSG00000110934 BIN2 BRAP-1 bridging integrator 2 protein-coding chr11-1011 chr11 36377514 36377724 + 16.6 0.000 intron (NM_024841, intron 2 of 9) CpG-4158 1634 NM_024841 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr1-5140 chr1 156145151 156145361 + 16.6 0.000 Intergenic AluJb|SINE|Alu -4688 NM_001370571 64218 Hs.408846 NM_022367 ENSG00000196189 SEMA4A CORD10|RP35|SEMAB|SEMB semaphorin 4A protein-coding chr1-2059 chr1 10377424 10377634 + 16.6 0.000 3' UTR (NM_015074, exon 47 of 47) 3' UTR (NM_015074, exon 47 of 47) -21535 NM_001304451 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr17-535 chr17 75979115 75979325 + 16.6 0.000 promoter-TSS (NM_007292) promoter-TSS (NM_007292) 3 NR_037709 100529145 Hs.706766 NR_037709 ENSG00000261408 TEN1-CDK3 C17orf106|C17orf106-CDK3|TEN1 TEN1-CDK3 readthrough (NMD candidate) ncRNA chr13-324 chr13 44274513 44274723 + 16.6 0.000 Intergenic Intergenic -78418 NR_107046 102465876 NR_107046 ENSG00000276319 MIR8079 hsa-mir-8079 microRNA 8079 ncRNA chr22-830 chr22 37303837 37304047 + 16.6 0.000 intron (NM_001318024, intron 8 of 12) L2c|LINE|L2 21434 NM_013385 27128 Hs.170944 NM_013385 ENSG00000100055 CYTH4 CYT4|DJ63G5.1|PSCD4|cytohesin-4 cytohesin 4 protein-coding chr9-1964 chr9 91396036 91396246 + 16.6 0.000 Intergenic Intergenic 27691 NM_005384 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr12-901 chr12 109949033 109949243 + 16.6 0.000 intron (NM_001330154, intron 13 of 13) intron (NM_001330154, intron 13 of 13) 47230 NM_057170 9815 Hs.434996 NM_014776 ENSG00000139436 GIT2 CAT-2|CAT2|PKL GIT ArfGAP 2 protein-coding chr5-1299 chr5 35088026 35088236 + 16.6 0.000 intron (NM_001204318, intron 2 of 6) intron (NM_001204318, intron 2 of 6) 29991 NR_037910 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chrX-211 chrX 74422829 74423039 + 16.6 0.000 intron (NM_006517, intron 1 of 5) intron (NM_006517, intron 1 of 5) 1441 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr6-1709 chr6 26607515 26607725 + 16.6 0.000 Intergenic Intergenic 10667 NM_013375 29777 Hs.254406 NM_013375 ENSG00000146109 ABT1 Esf2|hABT1 activator of basal transcription 1 protein-coding chr5-393 chr5 177553739 177553949 + 16.6 0.000 5' UTR (NM_001366499, exon 1 of 11) 5' UTR (NM_001366499, exon 1 of 11) 251 NM_001366499 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr3-483 chr3 98593474 98593684 + 16.6 0.000 promoter-TSS (NM_000097) promoter-TSS (NM_000097) 32 NM_000097 1371 Hs.476982 NM_000097 ENSG00000080819 CPOX COX|CPO|CPX|HCP coproporphyrinogen oxidase protein-coding chr2-2819 chr2 69756030 69756240 + 16.6 0.000 intron (NM_001320700, intron 1 of 12) MER63B|DNA|hAT-Blackjack 14001 NM_001365496 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr19-1332 chr19 3645650 3645860 + 16.5 0.000 intron (NM_001195733, intron 11 of 16) MIR|SINE|MIR -18940 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr4-1394 chr4 176340892 176341102 + 16.5 0.000 Intergenic Intergenic 21031 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr2-2208 chr2 71458531 71458741 + 16.5 0.000 intron (NM_003494, intron 1 of 54) intron (NM_003494, intron 1 of 54) 5075 NM_001130978 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr7-1265 chr7 78769702 78769912 + 16.5 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -239181 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr3-2253 chr3 49884113 49884323 + 16.5 0.000 Intergenic Intergenic -14312 NM_024046 79012 Hs.145156 NM_024046 ENSG00000164076 CAMKV 1G5|VACAMKL CaM kinase like vesicle associated protein-coding chr4-1046 chr4 55475433 55475643 + 16.5 0.000 intron (NM_004898, intron 7 of 22) Tigger1|DNA|TcMar-Tigger 70394 NM_001267843 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr12-364 chr12 990939 991149 + 16.5 0.000 promoter-TSS (NM_178039) promoter-TSS (NM_178039) -179 NR_027949 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr13-622 chr13 41942730 41942940 + 16.5 0.000 intron (NM_001009814, intron 2 of 25) intron (NM_001009814, intron 2 of 25) 18250 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr14-876 chr14 88551364 88551574 + 16.5 0.000 intron (NM_007039, intron 1 of 18) CpG 3538 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr10-1302 chr10 61438898 61439108 + 16.5 0.000 intron (NR_134508, intron 1 of 6) intron (NR_134508, intron 1 of 6) -13636 NR_120643 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr10-1083 chr10 30755591 30755801 + 16.5 0.000 Intergenic Intergenic 32477 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr11-2891 chr11 46365734 46365944 + 16.5 0.000 intron (NM_001105540, intron 1 of 31) intron (NM_001105540, intron 1 of 31) 4233 NM_001105540 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr6-1417 chr6 141253174 141253384 + 16.5 0.000 Intergenic Intergenic 569465 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr1-3143 chr1 63904823 63905033 + 16.5 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 130911 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr17-1887 chr17 56679821 56680031 + 16.5 0.000 Intergenic Intergenic 86227 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chrX-468 chrX 154384011 154384221 + 16.5 0.000 Intergenic Intergenic 4879 NM_000117 2010 Hs.522823 NM_000117 ENSG00000102119 EMD EDMD|LEMD5|STA emerin protein-coding chr3-1805 chr3 45509087 45509297 + 16.5 0.000 intron (NR_048543, intron 1 of 3) intron (NR_048543, intron 1 of 3) 353 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr17-1312 chr17 76141378 76141588 + 16.5 0.000 promoter-TSS (NM_001454) promoter-TSS (NM_001454) -238 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr4-957 chr4 2834565 2834775 + 16.5 0.000 3' UTR (NM_001145855, exon 13 of 13) 3' UTR (NM_001145855, exon 13 of 13) -9174 NM_001354761 118 Hs.183706 NM_001119 ENSG00000087274 ADD1 ADDA adducin 1 protein-coding chr17-1148 chr17 82852728 82852938 + 16.5 0.000 intron (NM_005993, intron 13 of 38) L1MB8|LINE|L1 -12811 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr6-2423 chr6 157952878 157953088 + 16.5 0.000 Intergenic L2|LINE|L2 -28880 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr1-4965 chr1 53956557 53956767 + 16.5 0.000 intron (NM_001256409, intron 3 of 8) intron (NM_001256409, intron 3 of 8) 10312 NM_052940 115353 Hs.40094 NM_052940 ENSG00000116212 LRRC42 dJ167A19.4 leucine rich repeat containing 42 protein-coding chr7-1753 chr7 40571911 40572121 + 16.5 0.000 intron (NM_001193312, intron 11 of 12) intron (NM_001193312, intron 11 of 12) 407923 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr12-2585 chr12 116718222 116718432 + 16.5 0.000 intron (NM_001353625, intron 1 of 1) intron (NM_001353625, intron 1 of 1) 19742 NM_001353625 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr16-1211 chr16 65546406 65546616 + 16.5 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 29789 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr1-2668 chr1 183859984 183860194 + 16.5 0.000 intron (NM_001297669, intron 4 of 18) intron (NM_001297669, intron 4 of 18) 54969 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr22-1426 chr22 43911509 43911719 + 16.5 0.000 Intergenic L2|LINE|L2 -12191 NM_025225 80339 Hs.654800 NM_025225 ENSG00000100344 PNPLA3 ADPN|C22orf20|iPLA(2)epsilon patatin like phospholipase domain containing 3 protein-coding chr12-1816 chr12 7934291 7934501 + 16.5 0.000 intron (NM_006931, intron 1 of 9) intron (NM_006931, intron 1 of 9) 1791 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr17-2072 chr17 73192379 73192589 + 16.5 0.000 promoter-TSS (NM_018714) promoter-TSS (NM_018714) -571 NM_018714 9382 Hs.103555 NM_018714 ENSG00000166685 COG1 CDG2G|LDLB component of oligomeric golgi complex 1 protein-coding chr2-4548 chr2 46721006 46721216 + 16.5 0.000 intron (NM_144949, intron 1 of 1) intron (NM_144949, intron 1 of 1) 21816 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr1-3514 chr1 170634251 170634461 + 16.5 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -29775 NM_022716 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr19-1727 chr19 52269377 52269587 + 16.5 0.000 promoter-TSS (NM_001010851) promoter-TSS (NM_001010851) -105 NM_001010851 90321 Hs.439662 NM_001010851 ENSG00000196214 ZNF766 - zinc finger protein 766 protein-coding chr1-2964 chr1 117527817 117528027 + 16.5 0.000 3' UTR (NM_006699, exon 13 of 13) 3' UTR (NM_006699, exon 13 of 13) 77848 NR_121626 100996263 Hs.202533 NR_121626 ENSG00000236866 LOC100996263 - uncharacterized LOC100996263 ncRNA chr21-156 chr21 43361696 43361906 + 16.5 0.000 non-coding (NR_131902, exon 1 of 2) non-coding (NR_131902, exon 1 of 2) 548 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr20-395 chr20 34907694 34907904 + 16.5 0.000 intron (NM_001076552, intron 2 of 18) intron (NM_001076552, intron 2 of 18) 31187 NM_018677 55902 Hs.517034 NM_018677 ENSG00000131069 ACSS2 ACAS2|ACECS|ACS|ACSA|dJ1161H23.1 acyl-CoA synthetase short chain family member 2 protein-coding chr6-769 chr6 26033874 26034084 + 16.5 0.000 promoter-TSS (NM_003513) promoter-TSS (NM_003513) -411 NM_003513 8335 Hs.248174 NM_003513 ENSG00000278463 HIST1H2AB H2A/m|H2AFM histone cluster 1 H2A family member b protein-coding chr13-488 chr13 110254138 110254348 + 16.5 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 52914 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr3-2761 chr3 150184375 150184585 + 16.5 0.000 Intergenic Intergenic -54039 NR_110168 101927992 Hs.534682 NR_110167 ENSG00000244541 LINC01213 - long intergenic non-protein coding RNA 1213 ncRNA chr16-1341 chr16 69711516 69711726 + 16.5 0.000 intron (NM_001286137, intron 3 of 3) intron (NM_001286137, intron 3 of 3) -2946 NR_145753 109617018 NR_145753 SNORD13H - small nucleolar RNA, C/D box 13H snoRNA chr12-1333 chr12 98490930 98491140 + 16.5 0.000 intron (NR_038383, intron 3 of 3) intron (NR_038383, intron 3 of 3) 12820 NR_038383 643770 Hs.129589 NR_038383 ENSG00000245017 LINC02453 - long intergenic non-protein coding RNA 2453 ncRNA chr10-1309 chr10 70715609 70715819 + 16.5 0.000 intron (NM_080722, intron 4 of 21) X7A_LINE|LINE|CR1 43208 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr11-1694 chr11 65791512 65791722 + 16.5 0.000 promoter-TSS (NR_108085) promoter-TSS (NR_108085) -749 NR_108085 101927828 Hs.666246 NR_108085 ENSG00000255120 OVOL1-AS1 - OVOL1 antisense RNA 1 ncRNA chr1-1683 chr1 119711790 119712000 + 16.5 0.000 promoter-TSS (NM_006623) promoter-TSS (NM_006623) -39 NM_006623 26227 Hs.487296 NM_006623 ENSG00000092621 PHGDH 3-PGDH|3PGDH|HEL-S-113|NLS|NLS1|PDG|PGAD|PGD|PGDH|PHGDHD|SERA phosphoglycerate dehydrogenase protein-coding chr15-687 chr15 100726344 100726554 + 16.5 0.000 Intergenic MIRc|SINE|MIR -123303 NR_160704 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA chr3-2828 chr3 15726126 15726336 + 16.5 0.000 intron (NM_001349280, intron 5 of 26) Tigger1|DNA|TcMar-Tigger -28860 NR_036085 100422990 NR_036085 ENSG00000264354 MIR3134 - microRNA 3134 ncRNA chr17-929 chr17 67244984 67245194 + 16.5 0.000 non-coding (NR_136398, exon 1 of 4) non-coding (NR_136398, exon 1 of 4) 107 NM_014877 9931 Hs.370140 NM_014877 ENSG00000198265 HELZ DHRC|DRHC|HUMORF5 helicase with zinc finger protein-coding chr2-2147 chr2 177038939 177039149 + 16.5 0.000 Intergenic Intergenic 173367 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr19-1113 chr19 12801667 12801877 + 16.5 0.000 promoter-TSS (NM_005809) promoter-TSS (NM_005809) 28 NM_005809 7001 Hs.432121 NM_005809 ENSG00000167815 PRDX2 HEL-S-2a|NKEF-B|NKEFB|PRP|PRX2|PRXII|PTX1|TDPX1|TPX1|TSA peroxiredoxin 2 protein-coding chr15-435 chr15 40039081 40039291 + 16.5 0.000 promoter-TSS (NR_040061) promoter-TSS (NR_040061) -5 NM_003134 6727 Hs.533732 NM_003134 ENSG00000140319 SRP14 ALURBP signal recognition particle 14 protein-coding chr15-1423 chr15 61479737 61479947 + 16.5 0.000 Intergenic Intergenic -250076 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chrX-623 chrX 46819328 46819538 + 16.5 0.000 Intergenic L1M1|LINE|L1 -17610 NM_006915 6102 Hs.44766 NM_006915 ENSG00000102218 RP2 DELXp11.3|NM23-H10|NME10|TBCCD2|XRP2 RP2 activator of ARL3 GTPase protein-coding chr19-1015 chr19 19643288 19643498 + 16.5 0.000 intron (NM_001288998, intron 1 of 19) intron (NM_001288998, intron 1 of 19) 264 NM_001288998 51291 Hs.49427 NM_016573 ENSG00000089639 GMIP ARHGAP46 GEM interacting protein protein-coding chr9-655 chr9 132161600 132161810 + 16.5 0.000 promoter-TSS (NM_032536) promoter-TSS (NM_032536) -353 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr7-3002 chr7 43249051 43249261 + 16.5 0.000 intron (NM_001287059, intron 2 of 27) CpG 98261 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr1-2674 chr1 197915877 197916087 + 16.5 0.000 intron (NM_001014434, intron 1 of 5) CpG -1390 NM_020204 56956 Hs.442578 NM_020204 ENSG00000143355 LHX9 - LIM homeobox 9 protein-coding chr15-586 chr15 67543312 67543522 + 16.5 0.000 exon (NM_145160, exon 1 of 22) exon (NM_145160, exon 1 of 22) 714 NM_002757 5607 Hs.114198 NM_002757 ENSG00000137764 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding chr21-215 chr21 29379019 29379229 + 16.5 0.000 Intergenic MER102c|DNA|hAT-Charlie 6623 NR_046564 100874322 Hs.326404 NR_046564 BACH1-IT2 - BACH1 intronic transcript 2 ncRNA chr21-659 chr21 38844002 38844212 + 16.5 0.000 Intergenic L1ME2|LINE|L1 -13432 NR_109926 101928398 Hs.122403 NR_109926 LOC101928398 - uncharacterized LOC101928398 ncRNA chr1-1506 chr1 19469511 19469721 + 16.5 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 14679 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr13-729 chr13 97077234 97077444 + 16.5 0.000 Intergenic MamGypLTR1a|LTR|Gypsy -82609 NM_001346195 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding chr11-1122 chr11 33670236 33670446 + 16.5 0.000 3' UTR (NM_012194, exon 21 of 21) 3' UTR (NM_012194, exon 21 of 21) 30399 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr8-1064 chr8 78932273 78932483 + 16.5 0.000 Intergenic Intergenic 94849 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA chr1-2378 chr1 93345671 93345881 + 16.5 0.000 promoter-TSS (NM_001938) promoter-TSS (NM_001938) 35 NR_034089 100131564 Hs.732666 NR_034089 CCDC18-AS1 - CCDC18 antisense RNA 1 ncRNA chr1-2640 chr1 153260485 153260695 + 16.5 0.000 intron (NM_000427, intron 1 of 1) MIR3|SINE|MIR 903 NM_000427 4014 Hs.251680 NM_000427 ENSG00000203782 LOR - loricrin protein-coding chr18-279 chr18 6056270 6056480 + 16.5 0.000 intron (NM_173464, intron 16 of 19) intron (NM_173464, intron 16 of 19) -160421 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr1-1595 chr1 52365204 52365414 + 16.5 0.000 intron (NM_032449, intron 1 of 23) L2b|LINE|L2 896 NM_001330585 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr11-979 chr11 68380859 68381069 + 16.5 0.000 intron (NM_002335, intron 5 of 22) MLT1C|LTR|ERVL-MaLR 68373 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr5-438 chr5 112707312 112707522 + 16.5 0.000 promoter-TSS (NM_001354897) promoter-TSS (NM_001354897) -81 NM_001354895 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding chr6-464 chr6 34757377 34757587 + 16.5 0.000 promoter-TSS (NM_003093) promoter-TSS (NM_003093) -23 NM_003093 6631 Hs.1063 NM_003093 ENSG00000124562 SNRPC U1C|Yhc1 small nuclear ribonucleoprotein polypeptide C protein-coding chr9-866 chr9 71767984 71768194 + 16.5 0.000 intron (NM_013390, intron 1 of 23) intron (NM_013390, intron 1 of 23) 424 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr12-1551 chr12 102631436 102631646 + 16.5 0.000 Intergenic Intergenic -150978 NM_000618 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr1-2577 chr1 33654323 33654533 + 16.5 0.000 intron (NM_052896, intron 27 of 69) intron (NM_052896, intron 27 of 69) 181783 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr5-690 chr5 177537949 177538159 + 16.5 0.000 exon (NM_001190946, exon 3 of 9) exon (NM_001190946, exon 3 of 9) 16041 NM_001366499 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr17-1030 chr17 50364703 50364913 + 16.5 0.000 Intergenic Intergenic 8376 NM_016504 51264 Hs.7736 NM_016504 ENSG00000108826 MRPL27 L27mt mitochondrial ribosomal protein L27 protein-coding chr11-2603 chr11 131749289 131749499 + 16.5 0.000 intron (NM_001352006, intron 2 of 9) MIRb|SINE|MIR -85838 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr1-2614 chr1 87916980 87917190 + 16.5 0.000 Intergenic Intergenic -545430 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr17-924 chr17 43212113 43212323 + 16.5 0.000 TTS (NM_001291572) TTS (NM_001291572) 343 NM_001291586 113277 Hs.536474 NM_145041 ENSG00000184988 TMEM106A - transmembrane protein 106A protein-coding chr1-2138 chr1 1075175 1075385 + 16.5 0.000 promoter-TSS (NM_001205252) promoter-TSS (NM_001205252) -974 NM_001205252 401934 Hs.568137 NM_001205252 ENSG00000237330 RNF223 - ring finger protein 223 protein-coding chr2-3210 chr2 219691857 219692067 + 16.5 0.000 Intergenic X6A_LINE|LINE|CR1 64332 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr6-969 chr6 82875899 82876109 + 16.5 0.000 Intergenic Intergenic 189837 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr7-1386 chr7 151186826 151187036 + 16.5 0.000 exon (NM_001142460, exon 1 of 5) exon (NM_001142460, exon 1 of 5) 319 NM_001142459 136371 Hs.647081 NM_080871 ENSG00000146926 ASB10 GLC1F ankyrin repeat and SOCS box containing 10 protein-coding chr2-2763 chr2 220090266 220090476 + 16.5 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -183806 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr17-1368 chr17 77350322 77350532 + 16.5 0.000 intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) -22910 NM_001113493 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr21-414 chr21 43911158 43911368 + 16.5 0.000 intron (NM_001369881, intron 2 of 9) intron (NM_001369881, intron 2 of 9) -5525 NM_001369880 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr16-3158 chr16 77555177 77555387 + 16.5 0.000 Intergenic MER5A|DNA|hAT-Charlie -120248 NM_001326358 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr11-949 chr11 27472637 27472847 + 16.5 0.000 promoter-TSS (NM_001346432) promoter-TSS (NM_001346432) 33 NM_001346432 55366 Hs.502176 NM_018490 ENSG00000205213 LGR4 BNMD17|GPR48 leucine rich repeat containing G protein-coupled receptor 4 protein-coding chr22-678 chr22 23142000 23142210 + 16.5 0.000 promoter-TSS (NM_014433) promoter-TSS (NM_014433) -115 NM_014433 27156 Hs.526920 NM_014433 ENSG00000100218 RSPH14 RTDR1 radial spoke head 14 homolog protein-coding chr6-2263 chr6 64778105 64778315 + 16.5 0.000 intron (NM_001292009, intron 22 of 43) intron (NM_001292009, intron 22 of 43) -523208 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr3-1287 chr3 100402431 100402641 + 16.5 0.000 intron (NM_001085451, intron 1 of 3) intron (NM_001085451, intron 1 of 3) 997 NM_001085451 348801 Hs.591294 NM_001085451 ENSG00000206535 LNP1 NP3 leukemia NUP98 fusion partner 1 protein-coding chr1-3249 chr1 202541603 202541813 + 16.5 0.000 intron (NM_001197131, intron 1 of 6) intron (NM_001197131, intron 1 of 6) 1594 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr10-1179 chr10 73439861 73440071 + 16.5 0.000 intron (NM_001142353, intron 12 of 13) intron (NM_001142353, intron 12 of 13) -6405 NM_001024593 118490 Hs.631823 NM_001024593 ENSG00000166343 MSS51 ZMYND17 MSS51 mitochondrial translational activator protein-coding chr14-436 chr14 75648493 75648703 + 16.5 0.000 TTS (NM_001195283) TTS (NM_001195283) 12278 NM_007176 11161 Hs.15106 NM_007176 ENSG00000133935 ERG28 C14orf1|NET51 ergosterol biosynthesis 28 homolog protein-coding chr8-1392 chr8 28941572 28941782 + 16.5 0.000 intron (NM_001324393, intron 2 of 11) intron (NM_001324393, intron 2 of 11) 50363 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr18-355 chr18 23503976 23504186 + 16.5 0.000 intron (NM_001318707, intron 1 of 16) CpG 570 NM_013326 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chrX-380 chrX 2889521 2889731 + 16.5 0.000 Intergenic MER41A|LTR|ERV1 -15278 NR_144459 100506356 Hs.528631 NR_144459 ENSG00000229851 ARSD-AS1 - ARSD antisense RNA 1 ncRNA chr1-1532 chr1 155763537 155763747 + 16.5 0.000 TTS (NM_001282861) TTS (NM_001282861) 17874 NR_024117 100129405 Hs.656361 NR_024117 MSTO2P MSTO2 misato family member 2, pseudogene pseudo chr13-248 chr13 41263578 41263788 + 16.5 0.000 promoter-TSS (NM_004294) promoter-TSS (NM_004294) -107 NM_004294 9617 Hs.382176 NM_004294 ENSG00000120662 MTRF1 MRF1|MTTRF1|RF1 mitochondrial translation release factor 1 protein-coding chr3-1393 chr3 105906792 105907002 + 16.5 0.000 Intergenic Intergenic -37496 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr7-655 chr7 121085022 121085232 + 16.5 0.000 intron (NM_001105533, intron 4 of 17) intron (NM_001105533, intron 4 of 17) 95736 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr3-1268 chr3 187745551 187745761 + 16.5 0.000 promoter-TSS (NM_001706) promoter-TSS (NM_001706) -188 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr1-3890 chr1 58629000 58629210 + 16.5 0.000 Intergenic L2b|LINE|L2 -51853 NM_002353 4070 Hs.23582 NM_002353 ENSG00000184292 TACSTD2 EGP-1|EGP1|GA733-1|GA7331|GP50|M1S1|TROP2 tumor associated calcium signal transducer 2 protein-coding chr14-505 chr14 55073913 55074123 + 16.5 0.000 Intergenic Intergenic 22371 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding chr2-2947 chr2 13676411 13676621 + 16.5 0.000 Intergenic HERV35I-int|LTR|ERV1 -669503 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr5-291 chr5 149406627 149406837 + 16.5 0.000 promoter-TSS (NR_105059) promoter-TSS (NR_105059) -113 NR_105059 728264 Hs.519666 NR_027180 CARMN CARMEN|MIR143HG cardiac mesoderm enhancer-associated non-coding RNA ncRNA chr1-3095 chr1 32695418 32695628 + 16.5 0.000 exon (NM_001161708, exon 2 of 4) exon (NM_001161708, exon 2 of 4) 7247 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr2-2408 chr2 26971214 26971424 + 16.5 0.000 intron (NM_012326, intron 1 of 6) intron (NM_012326, intron 1 of 6) 682 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr21-133 chr21 34545226 34545436 + 16.5 0.000 intron (NM_004414, intron 1 of 3) intron (NM_004414, intron 1 of 3) -18321 NM_001331016 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr22-734 chr22 41983770 41983980 + 16.5 0.000 intron (NM_019106, intron 2 of 9) L2c|LINE|L2 6948 NM_019106 55964 Hs.120483 NM_019106 ENSG00000100167 SEPTIN3 SEP3|SEPT3|bK250D10.3 septin 3 protein-coding chr3-1236 chr3 126960222 126960432 + 16.5 0.000 TTS (NM_001320610) TTS (NM_001320610) -28267 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr10-1128 chr10 132411752 132411962 + 16.5 0.000 intron (NM_138499, intron 2 of 2) intron (NM_138499, intron 2 of 2) 14657 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr6-1282 chr6 109165659 109165869 + 16.5 0.000 promoter-TSS (NR_152435) promoter-TSS (NR_152435) -67 NR_152435 221262 Hs.373914 NM_173671 ENSG00000203799 CCDC162P C6orf183|C6orf184|C6orf185|CCDC162 coiled-coil domain containing 162, pseudogene pseudo chr8-931 chr8 37599858 37600068 + 16.5 0.000 Intergenic Plat_L3|LINE|CR1 -78577 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr17-1331 chr17 17733282 17733492 + 16.5 0.000 intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) 32915 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr1-1270 chr1 33060699 33060909 + 16.5 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -20349 NM_001350400 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr17-1597 chr17 63704122 63704332 + 16.5 0.000 3' UTR (NM_153335, exon 9 of 9) 3' UTR (NM_153335, exon 9 of 9) 3889 NR_046273 729683 Hs.534931 NR_046273 LOC729683 - uncharacterized LOC729683 ncRNA chr4-713 chr4 107034249 107034459 + 16.5 0.000 intron (NM_014421, intron 1 of 3) intron (NM_014421, intron 1 of 3) 1959 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr2-2316 chr2 106582187 106582397 + 16.5 0.000 Intergenic Intergenic 94928 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr6-625 chr6 37134638 37134848 + 16.5 0.000 Intergenic Intergenic -35409 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr3-1537 chr3 185935607 185935817 + 16.5 0.000 intron (NM_004593, intron 1 of 8) intron (NM_004593, intron 1 of 8) 2302 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr7-1784 chr7 78221995 78222205 + 16.5 0.000 intron (NM_001301128, intron 10 of 20) intron (NM_001301128, intron 10 of 20) -125142 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr7-1815 chr7 102381705 102381915 + 16.5 0.000 intron (NR_038967, intron 4 of 8) intron (NR_038967, intron 4 of 8) -14553 NM_024653 79706 Hs.722104 NM_024653 ENSG00000128563 PRKRIP1 C114|KRBOX3 PRKR interacting protein 1 protein-coding chr10-1124 chr10 126421810 126422020 + 16.5 0.000 promoter-TSS (NR_073453) promoter-TSS (NR_073453) -36 NR_073453 101101772 Hs.562258 NR_073453 ENSG00000235180 LINC00601 - long intergenic non-protein coding RNA 601 ncRNA chr6-1093 chr6 74731478 74731688 + 16.5 0.000 Intergenic Intergenic 397199 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr14-669 chr14 68793294 68793504 + 16.5 0.000 5' UTR (NM_004926, exon 1 of 2) 5' UTR (NM_004926, exon 1 of 2) 515 NM_004926 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr15-819 chr15 90100209 90100419 + 16.5 0.000 intron (NM_002168, intron 1 of 10) intron (NM_002168, intron 1 of 10) 307 NM_001289910 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr22-1150 chr22 46693239 46693449 + 16.5 0.000 intron (NM_022766, intron 10 of 12) intron (NM_022766, intron 10 of 12) 44908 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr5-957 chr5 138488522 138488732 + 16.5 0.000 Intergenic Intergenic 23148 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr6-870 chr6 52537713 52537923 + 16.5 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 39242 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr16-844 chr16 1474945 1475155 + 16.5 0.000 promoter-TSS (NM_001114331) promoter-TSS (NM_001114331) -22 NM_001287 1186 Hs.459649 NM_001287 ENSG00000103249 CLCN7 CLC-7|CLC7|OPTA2|OPTB4|PPP1R63 chloride voltage-gated channel 7 protein-coding chr21-733 chr21 37400544 37400754 + 16.5 0.000 intron (NM_001347723, intron 1 of 10) intron (NM_001347723, intron 1 of 10) -18256 NM_130436 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr20-497 chr20 13008964 13009174 + 16.5 0.000 promoter-TSS (NM_018327) promoter-TSS (NM_018327) 97 NM_018327 55304 Hs.425023 NM_018327 ENSG00000172296 SPTLC3 C20orf38|LCB 3|LCB2B|LCB3|SPT 3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b serine palmitoyltransferase long chain base subunit 3 protein-coding chr14-401 chr14 50116617 50116827 + 16.5 0.000 promoter-TSS (NM_001040662) promoter-TSS (NM_001040662) -150 NM_024558 79609 Hs.558541 NM_024558 ENSG00000100483 VCPKMT C14orf138|METTL21D|VCP-KMT valosin containing protein lysine methyltransferase protein-coding chr1-2952 chr1 86259001 86259211 + 16.5 0.000 Intergenic Intergenic 98581 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr8-1249 chr8 130263860 130264070 + 16.5 0.000 intron (NM_001362925, intron 3 of 29) MIRc|SINE|MIR 32568 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr15-413 chr15 69074240 69074450 + 16.5 0.000 Intergenic CpG -6505 NR_026949 283673 Hs.177927 NM_173610 ENSG00000212766 EWSAT1 LINC00277|NCRNA00277|TMEM84 Ewing sarcoma associated transcript 1 ncRNA chr13-570 chr13 40910643 40910853 + 16.5 0.000 intron (NR_038259, intron 1 of 5) intron (NR_038259, intron 1 of 5) 11002 NR_038258 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo chr2-1896 chr2 120398134 120398344 + 16.5 0.000 Intergenic L2c|LINE|L2 52103 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr8-934 chr8 38973620 38973830 + 16.5 0.000 promoter-TSS (NM_153692) promoter-TSS (NM_153692) -503 NM_153692 203100 Hs.661014 NM_153692 ENSG00000169495 HTRA4 - HtrA serine peptidase 4 protein-coding chr10-1920 chr10 133351071 133351281 + 16.5 0.000 intron (NM_001145201, intron 2 of 4) intron (NM_001145201, intron 2 of 4) 3803 NM_001145201 118471 Hs.15951 NM_145202 ENSG00000165828 PRAP1 PRO1195|UPA proline rich acidic protein 1 protein-coding chr10-953 chr10 35058236 35058446 + 16.5 0.000 intron (NM_001324376, intron 4 of 21) LTR34|LTR|ERV1 15942 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr4-1579 chr4 5785348 5785558 + 16.5 0.000 intron (NM_001306090, intron 12 of 20) intron (NM_001306090, intron 12 of 20) 74252 NM_153717 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr7-2549 chr7 85509059 85509269 + 16.5 0.000 Intergenic HERV35I-int|LTR|ERV1 88042 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr2-2409 chr2 27043155 27043365 + 16.5 0.000 Intergenic Intergenic 7004 NR_046730 100874031 Hs.132725 NR_046730 ENSG00000231636 AGBL5-AS1 - AGBL5 antisense RNA 1 ncRNA chr16-1538 chr16 66478768 66478978 + 16.5 0.000 intron (NM_001197225, intron 3 of 4) intron (NM_001197225, intron 3 of 4) -2471 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr8-869 chr8 116686480 116686690 + 16.5 0.000 intron (NM_003756, intron 2 of 7) L2b|LINE|L2 34485 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr2-3029 chr2 67476882 67477092 + 16.5 0.000 Intergenic Intergenic 79654 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr2-1648 chr2 39107321 39107531 + 16.5 0.000 intron (NM_005633, intron 1 of 22) LTR16B2|LTR|ERVL 13037 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr20-654 chr20 38171235 38171445 + 16.5 0.000 Intergenic Intergenic -4832 NM_001323316 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr12-591 chr12 49367292 49367502 + 16.5 0.000 non-coding (NR_120663, exon 1 of 15) non-coding (NR_120663, exon 1 of 15) 492 NM_001293285 65244 Hs.654826 NM_023071 ENSG00000123352 SPATS2 Nbla00526|P59SCR|SCR59|SPATA10 spermatogenesis associated serine rich 2 protein-coding chr7-954 chr7 139679914 139680124 + 16.5 0.000 intron (NM_001113239, intron 2 of 14) intron (NM_001113239, intron 2 of 14) 97979 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr15-741 chr15 25790169 25790379 + 16.5 0.000 intron (NM_024490, intron 1 of 20) intron (NM_024490, intron 1 of 20) 58551 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr1-1239 chr1 93606009 93606219 + 16.5 0.000 intron (NM_001261409, intron 3 of 11) intron (NM_001261409, intron 3 of 11) 7983 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr6-569 chr6 26087367 26087577 + 16.5 0.000 promoter-TSS (NM_139003) promoter-TSS (NM_139003) 43 NM_139007 3077 Hs.233325 NM_000410 ENSG00000010704 HFE HFE1|HH|HLA-H|MVCD7|TFQTL2 homeostatic iron regulator protein-coding chr3-1031 chr3 156691932 156692142 + 16.5 0.000 intron (NM_015508, intron 2 of 5) intron (NM_015508, intron 2 of 5) 15373 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr4-2447 chr4 169640461 169640671 + 16.5 0.000 intron (NM_173872, intron 2 of 13) intron (NM_173872, intron 2 of 13) -19496 NM_001243374 1182 Hs.481186 NM_001829 ENSG00000109572 CLCN3 CLC3|ClC-3 chloride voltage-gated channel 3 protein-coding chr3-1633 chr3 78399743 78399953 + 16.5 0.000 Intergenic Intergenic -350885 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr11-2020 chr11 64335110 64335320 + 16.5 0.000 Intergenic Intergenic -4989 NM_032251 283234 Hs.98564 NM_032251 ENSG00000168071 CCDC88B BRLZ|CCDC88|HKRP3|gipie coiled-coil domain containing 88B protein-coding chr12-2270 chr12 105916302 105916512 + 16.5 0.000 Intergenic L1MC3|LINE|L1 209633 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr1-2698 chr1 212621957 212622167 + 16.5 0.000 Intergenic Intergenic -2412 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding chr17-2591 chr17 77149055 77149265 + 16.5 0.000 intron (NM_001143999, intron 3 of 16) intron (NM_001143999, intron 3 of 16) 8191 NM_001143999 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr14-930 chr14 105411025 105411235 + 16.5 0.000 intron (NM_001195082, intron 2 of 3) CpG 8609 NR_125385 100507437 Hs.676548 NR_125384 ENSG00000251602 LOC100507437 - uncharacterized LOC100507437 ncRNA chr12-136 chr12 131918789 131918999 + 16.5 0.000 intron (NM_003565, intron 23 of 27) intron (NM_003565, intron 23 of 27) -10382 NM_001002019 80324 Hs.592004 NM_025215 ENSG00000177192 PUS1 MLASA1 pseudouridine synthase 1 protein-coding chr4-545 chr4 121696215 121696425 + 16.5 0.000 intron (NM_001154, intron 2 of 12) CpG 660 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr16-719 chr16 30409425 30409635 + 16.5 0.000 intron (NM_001142305, intron 2 of 2) intron (NM_001142305, intron 2 of 2) 1924 NM_001142305 51333 Hs.148584 NM_016643 ENSG00000179965 ZNF771 DSC43 zinc finger protein 771 protein-coding chr6-1139 chr6 156425438 156425648 + 16.5 0.000 Intergenic Intergenic 46793 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr11-3160 chr11 61385677 61385887 + 16.5 0.000 Intergenic LTR41B|LTR|ERVL -6578 NM_001173991 51259 Hs.26745 NM_016499 ENSG00000187049 TMEM216 HSPC244 transmembrane protein 216 protein-coding chr19-1921 chr19 1827386 1827596 + 16.5 0.000 exon (NM_020695, exon 2 of 16) exon (NM_020695, exon 2 of 16) 5402 NR_152847 100288123 Hs.662426 NR_034114 ENSG00000267244 LOC100288123 - uncharacterized LOC100288123 ncRNA chr18-201 chr18 22674204 22674414 + 16.5 0.000 Intergenic Intergenic 112528 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr12-1943 chr12 105987693 105987903 + 16.5 0.000 Intergenic Intergenic 152235 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr1-1655 chr1 247315803 247316013 + 16.5 0.000 intron (NM_001329733, intron 6 of 9) MER5A1|DNA|hAT-Charlie 15959 NM_032752 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr1-2799 chr1 3061700 3061910 + 16.5 0.000 non-coding (NR_015440, exon 3 of 6) non-coding (NR_015440, exon 3 of 6) 5920 NR_024371 440556 Hs.531041 NM_198543 ENSG00000177133 PRDM16-DT LINC00982|lnc-dPrdm16 PRDM16 divergent transcript ncRNA chr4-249 chr4 40056076 40056286 + 16.5 0.000 promoter-TSS (NM_018177) promoter-TSS (NM_018177) -669 NM_018177 55728 Hs.391463 NM_018177 ENSG00000078177 N4BP2 B3BP NEDD4 binding protein 2 protein-coding chr20-887 chr20 33051474 33051684 + 16.5 0.000 Intergenic L1ME2z|LINE|L1 -3752 NM_182658 359710 Hs.472442 NM_182658 ENSG00000186190 BPIFB3 C20orf185|LPLUNC3|RYA3 BPI fold containing family B member 3 protein-coding chr15-877 chr15 69414932 69415142 + 16.5 0.000 promoter-TSS (NR_132970) promoter-TSS (NR_132970) -8 NR_132969 145694 Hs.147229 NR_132969 ENSG00000259426 LOC145694 - uncharacterized LOC145694 ncRNA chr1-2038 chr1 207925222 207925432 + 16.5 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -14202 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr4-610 chr4 6674095 6674305 + 16.5 0.000 promoter-TSS (NR_134664) promoter-TSS (NR_134664) 125 NR_015433 93622 Hs.6815 NM_138699 ENSG00000170846 LOC93622 - Morf4 family associated protein 1 like 1 pseudogene pseudo chr14-1099 chr14 68896071 68896281 + 16.5 0.000 intron (NM_001102, intron 8 of 20) intron (NM_001102, intron 8 of 20) 83126 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr1-2241 chr1 170162943 170163153 + 16.5 0.000 intron (NM_001136107, intron 2 of 3) intron (NM_001136107, intron 2 of 3) -11331 NR_146891 105371609 Hs.508115 NR_146891 LINC01681 - long intergenic non-protein coding RNA 1681 ncRNA chr7-1402 chr7 11726804 11727014 + 16.5 0.000 intron (NM_015204, intron 1 of 26) intron (NM_015204, intron 1 of 26) 105289 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr6-2370 chr6 136284243 136284453 + 16.5 0.000 intron (NM_001363659, intron 1 of 11) intron (NM_001363659, intron 1 of 11) 5498 NM_001301038 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr19-1354 chr19 46904833 46905043 + 16.5 0.000 intron (NM_004491, intron 1 of 6) MIR3|SINE|MIR 43941 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr13-381 chr13 113608261 113608471 + 16.5 0.000 intron (NM_007111, intron 2 of 11) intron (NM_007111, intron 2 of 11) 23613 NM_007111 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr11-841 chr11 87037820 87038030 + 16.5 0.000 promoter-TSS (NM_022918) promoter-TSS (NM_022918) -9 NM_001168724 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr11-1582 chr11 134126281 134126491 + 16.5 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 24977 NR_145790 109623486 NR_145790 SNORD153 - small nucleolar RNA, C/D box 153 snoRNA chr8-1464 chr8 19152500 19152710 + 16.5 0.000 Intergenic Intergenic 92917 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr13-1030 chr13 59585855 59586065 + 16.5 0.000 Intergenic Intergenic -426758 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr2-700 chr2 241558646 241558856 + 16.5 0.000 promoter-TSS (NM_032515) promoter-TSS (NM_032515) 6 NM_032515 666 Hs.293753 NM_032515 ENSG00000176720 BOK BCL2L9|BOKL BCL2 family apoptosis regulator BOK protein-coding chr9-936 chr9 87656539 87656749 + 16.5 0.000 intron (NM_004938, intron 17 of 25) L1M1|LINE|L1 -69475 NM_001912 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr5-1155 chr5 172149154 172149364 + 16.5 0.000 intron (NM_005990, intron 2 of 18) intron (NM_005990, intron 2 of 18) 38965 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr2-4061 chr2 113988384 113988594 + 16.5 0.000 intron (NR_148508, intron 1 of 1) intron (NR_148508, intron 1 of 1) -8505 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr2-2032 chr2 118089403 118089613 + 16.5 0.000 intron (NM_001321332, intron 1 of 5) intron (NM_001321332, intron 1 of 5) 958 NM_001321332 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding chr1-3093 chr1 32071775 32071985 + 16.5 0.000 promoter-TSS (NM_001319677) promoter-TSS (NM_001319677) -151 NM_001319677 55116 Hs.25544 NM_018056 ENSG00000121775 TMEM39B - transmembrane protein 39B protein-coding chr5-1011 chr5 98631775 98631985 + 16.5 0.000 Intergenic Intergenic -136752 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr15-965 chr15 44087830 44088040 + 16.5 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) 106511 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr13-583 chr13 95256240 95256450 + 16.5 0.000 intron (NM_001105515, intron 1 of 20) intron (NM_001105515, intron 1 of 20) 45101 NM_005845 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr6-1069 chr6 27893118 27893328 + 16.5 0.000 promoter-TSS (NM_003527) promoter-TSS (NM_003527) -38 NM_003514 8336 Hs.134999 NM_003514 ENSG00000278677 HIST1H2AM H2A.1|H2A/n|H2AFN|dJ193B12.1 histone cluster 1 H2A family member m protein-coding chr8-250 chr8 142452728 142452938 + 16.5 0.000 intron (NM_001702, intron 1 of 30) CpG 3184 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr19-1857 chr19 16627472 16627682 + 16.5 0.000 intron (NM_004831, intron 1 of 2) CpG 627 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr2-1958 chr2 235511458 235511668 + 16.5 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) 5812 NR_131900 100506749 Hs.684184 NR_131900 ENSG00000235529 AGAP1-IT1 - AGAP1 intronic transcript 1 ncRNA chr13-1081 chr13 52415142 52415352 + 16.5 0.000 3' UTR (NM_001282169, exon 14 of 14) 3' UTR (NM_001282169, exon 14 of 14) -9075 NM_018676 55901 Hs.325667 NM_018676 ENSG00000136114 THSD1 TMTSP|UNQ3010 thrombospondin type 1 domain containing 1 protein-coding chr20-556 chr20 49270245 49270455 + 16.5 0.000 exon (NM_021035, exon 3 of 14) exon (NM_021035, exon 3 of 14) 7707 NM_021035 57169 Hs.371794 NM_021035 ENSG00000124201 ZNFX1 - zinc finger NFX1-type containing 1 protein-coding chr16-1860 chr16 75455834 75456044 + 16.5 0.000 intron (NM_001304998, intron 1 of 2) intron (NM_001304998, intron 1 of 2) 8504 NM_001304997 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding chr14-1373 chr14 26824505 26824715 + 16.5 0.000 Intergenic Intergenic -2490 NR_110033 101927062 NR_110033 ENSG00000257845 LINC02294 - long intergenic non-protein coding RNA 2294 ncRNA chr16-3185 chr16 84267254 84267464 + 16.5 0.000 Intergenic MIRb|SINE|MIR -27519 NM_021197 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr1-6879 chr1 116849172 116849382 + 16.5 0.000 Intergenic Intergenic -60639 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr5-1099 chr5 132506048 132506258 + 16.5 0.000 Intergenic L1MEf|LINE|L1 -15380 NR_149069 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr3-1625 chr3 53581760 53581970 + 16.5 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 87254 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr15-766 chr15 72487610 72487820 + 16.5 0.000 intron (NM_005744, intron 1 of 13) intron (NM_005744, intron 1 of 13) 13385 NM_005744 25820 Hs.268787 NM_005744 ENSG00000166233 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding chr20-417 chr20 9067804 9068014 + 16.5 0.000 Intergenic Intergenic -1145 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr17-2621 chr17 1941761 1941971 + 16.5 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -75850 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr16-1385 chr16 73020334 73020544 + 16.5 0.000 intron (NM_006885, intron 1 of 9) intron (NM_006885, intron 1 of 9) 27689 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr4-1128 chr4 154049519 154049729 + 16.5 0.000 Intergenic Intergenic -260541 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr9-942 chr9 119811065 119811275 + 16.5 0.000 Intergenic Intergenic -123890 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr10-975 chr10 103715430 103715640 + 16.5 0.000 intron (NM_014631, intron 5 of 13) intron (NM_014631, intron 5 of 13) -31244 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr8-1186 chr8 43139250 43139460 + 16.5 0.000 Intergenic MER61A|LTR|ERV1 -1109 NM_001363229 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr5-1825 chr5 92800441 92800651 + 16.5 0.000 Intergenic Intergenic 770797 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr5-1041 chr5 172276344 172276554 + 16.5 0.000 intron (NM_152277, intron 1 of 2) intron (NM_152277, intron 1 of 2) 7315 NM_152277 92181 Hs.131570 NM_152277 ENSG00000168246 UBTD2 DCUBP ubiquitin domain containing 2 protein-coding chr10-872 chr10 26781171 26781381 + 16.5 0.000 intron (NM_001012752, intron 2 of 9) HERVL40-int|LTR|ERVL 79811 NM_001178124 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr8-727 chr8 96164375 96164585 + 16.5 0.000 Intergenic Intergenic -3674 NM_001001557 392255 Hs.492277 NM_001001557 ENSG00000156466 GDF6 BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|SGM1|SYNS4 growth differentiation factor 6 protein-coding chr11-2594 chr11 126375871 126376081 + 16.5 0.000 intron (NM_001348396, intron 2 of 11) intron (NM_001348396, intron 2 of 11) 19964 NM_001348399 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr7-1181 chr7 33932886 33933096 + 16.5 0.000 intron (NM_133468, intron 3 of 15) intron (NM_133468, intron 3 of 15) 27452 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr10-1332 chr10 98316675 98316885 + 16.5 0.000 Intergenic L2b|LINE|L2 -48586 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr10-2837 chr10 34781521 34781731 + 16.5 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 33670 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr17-1554 chr17 7687475 7687685 + 16.5 0.000 promoter-TSS (NM_000546) promoter-TSS (NM_000546) -30 NM_001126114 7157 Hs.437460 NM_000546 ENSG00000141510 TP53 BCC7|BMFS5|LFS1|P53|TRP53 tumor protein p53 protein-coding chr9-1743 chr9 128397401 128397611 + 16.5 0.000 intron (NR_031672, intron 2 of 2).4 L2c|LINE|L2 -4792 NR_029837 407003 NR_029837 ENSG00000284185 MIR219A2 MIR219-2|MIRN219-2|hsa-mir-219a-2|mir-219a-2 microRNA 219a-2 ncRNA chr8-1183 chr8 40106561 40106771 + 16.5 0.000 Intergenic Intergenic -46816 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr19-460 chr19 10960792 10961002 + 16.5 0.000 promoter-TSS (NM_001128844) promoter-TSS (NM_001128844) -133 NM_001128847 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr2-1660 chr2 61917911 61918121 + 16.5 0.000 intron (NM_152516, intron 1 of 2) intron (NM_152516, intron 1 of 2) 12374 NM_152516 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr17-1845 chr17 17666260 17666470 + 16.5 0.000 Intergenic Intergenic 11323 NR_131243 105371564 Hs.369680 NR_131243 ENSG00000223979 SMCR2 TCONS_00025215 Smith-Magenis syndrome chromosome region, candidate 2 ncRNA chr20-661 chr20 63232366 63232576 + 16.5 0.000 Intergenic Intergenic -3434 NM_139317 79444 Hs.256126 NM_022161 ENSG00000101197 BIRC7 KIAP|LIVIN|ML-IAP|MLIAP|RNF50 baculoviral IAP repeat containing 7 protein-coding chr16-848 chr16 11632730 11632940 + 16.5 0.000 Intergenic Intergenic -35620 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr1-1851 chr1 30727870 30728080 + 16.5 0.000 Intergenic (TCTC)n|Simple_repeat|Simple_repeat -4390 NM_002379 4146 Hs.150366 NM_002379 ENSG00000162510 MATN1 CMP|CRTM matrilin 1 protein-coding chr18-424 chr18 76620452 76620662 + 16.5 0.000 non-coding (NR_120419, exon 1 of 2) non-coding (NR_120419, exon 1 of 2) 780 NR_120419 400660 Hs.131718 NR_120419 ENSG00000266256 LINC00683 - long intergenic non-protein coding RNA 683 ncRNA chr14-383 chr14 20999135 20999345 + 16.5 0.000 promoter-TSS (NM_001256588) promoter-TSS (NM_001256588) -53 NM_014579 29986 Hs.175783 NM_014579 ENSG00000165794 SLC39A2 6A1|ETI-1|ZIP-2|ZIP2 solute carrier family 39 member 2 protein-coding chr2-1437 chr2 218691271 218691481 + 16.5 0.000 intron (NM_001369423, intron 14 of 26) intron (NM_001369423, intron 14 of 26) 19058 NM_001369423 27148 Hs.471404 NM_015690 ENSG00000163482 STK36 FU serine/threonine kinase 36 protein-coding chr9-1286 chr9 33489108 33489318 + 16.5 0.000 Intergenic Intergenic -15270 NM_139235 65083 Hs.493709 NM_022917 ENSG00000165271 NOL6 NRAP|UTP22|bA311H10.1 nucleolar protein 6 protein-coding chr9-2124 chr9 99840108 99840318 + 16.5 0.000 intron (NM_006981, intron 5 of 7) (CTGG)n|Simple_repeat|Simple_repeat 18328 NM_173199 8013 Hs.279522 NM_006981 ENSG00000119508 NR4A3 CHN|CSMF|MINOR|NOR1|TEC nuclear receptor subfamily 4 group A member 3 protein-coding chr4-921 chr4 2395197 2395407 + 16.5 0.000 intron (NM_020972, intron 1 of 12) intron (NM_020972, intron 1 of 12) 23343 NM_001172656 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr17-2539 chr17 35051822 35052032 + 16.5 0.000 intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) 11780 NM_001017368 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr14-597 chr14 99605440 99605650 + 16.5 0.000 intron (NM_001329411, intron 1 of 8) L2a|LINE|L2 1007 NM_001329411 84439 Hs.131714 NM_032425 ENSG00000182218 HHIPL1 KIAA1822|UNQ9245 HHIP like 1 protein-coding chr6-1596 chr6 37244785 37244995 + 16.5 0.000 intron (NM_145316, intron 1 of 3) MLT1H|LTR|ERVL-MaLR 12709 NM_145316 221468 Hs.520101 NM_145316 ENSG00000172738 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding chr1-1373 chr1 54542239 54542449 + 16.5 0.000 Intergenic CpG -5884 NM_015547 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr2-4250 chr2 222130937 222131147 + 16.5 0.000 Intergenic Intergenic -167105 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr2-2523 chr2 182372736 182372946 + 16.5 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) 54207 NM_001363871 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr19-1209 chr19 3034863 3035073 + 16.5 0.000 intron (NM_001144761, intron 2 of 19) intron (NM_001144761, intron 2 of 19) -5354 NM_001144762 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr4-1581 chr4 6885823 6886033 + 16.5 0.000 Intergenic Intergenic -23516 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr12-1079 chr12 43063745 43063955 + 16.5 0.000 Intergenic Intergenic -91465 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr6-891 chr6 109308230 109308440 + 16.5 0.000 intron (NR_152435, intron 31 of 45) intron (NR_152435, intron 31 of 45) 73404 NM_001346500 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr8-1027 chr8 23218194 23218404 + 16.5 0.000 intron (NM_003844, intron 1 of 9) intron (NM_003844, intron 1 of 9) 6803 NM_003844 8797 Hs.213467 NM_003844 ENSG00000104689 TNFRSF10A APO2|CD261|DR4|TRAILR-1|TRAILR1 TNF receptor superfamily member 10a protein-coding chr5-1386 chr5 115069403 115069613 + 16.5 0.000 Intergenic Intergenic 100400 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr16-1067 chr16 14285165 14285375 + 16.5 0.000 Intergenic AluJb|SINE|Alu -17018 NR_132983 100129781 Hs.190748 NR_132983 MIR193BHG - MIR193B host gene ncRNA chr3-2426 chr3 8758251 8758461 + 16.5 0.000 intron (NM_001354656, intron 3 of 3) intron (NM_001354656, intron 3 of 3) 10375 NM_001354656 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr8-1422 chr8 89790137 89790347 + 16.5 0.000 exon (NM_003821, exon 11 of 11) exon (NM_003821, exon 11 of 11) 32426 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding chr15-327 chr15 51622733 51622943 + 16.5 0.000 promoter-TSS (NM_015263) promoter-TSS (NM_015263) -67 NM_015263 23312 Hs.511386 NM_015263 ENSG00000104093 DMXL2 DFNA71|PEPNS|RC3 Dmx like 2 protein-coding chr15-358 chr15 68820799 68821009 + 16.5 0.000 promoter-TSS (NM_006305) promoter-TSS (NM_006305) -9 NM_006305 8125 Hs.458747 NM_006305 ENSG00000140350 ANP32A C15orf1|HPPCn|I1PP2A|LANP|MAPM|PHAP1|PHAPI|PP32 acidic nuclear phosphoprotein 32 family member A protein-coding chr5-1076 chr5 169543 169753 + 16.5 0.000 intron (NM_052909, intron 14 of 19) CpG -21847 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr9-1594 chr9 98627956 98628166 + 16.5 0.000 intron (NM_005458, intron 1 of 18) intron (NM_005458, intron 1 of 18) 80874 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr11-2354 chr11 103367722 103367932 + 16.5 0.000 intron (NM_001377, intron 83 of 88) L1MA6|LINE|L1 258401 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr11-2022 chr11 64654367 64654577 + 16.5 0.000 intron (NM_015080, intron 11 of 22) MIR3|SINE|MIR -10927 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr18-328 chr18 14925480 14925690 + 16.5 0.000 Intergenic Intergenic -20682 NR_104164 400644 Hs.514732 NR_104164 ENSG00000266554 LINC01443 - long intergenic non-protein coding RNA 1443 ncRNA chr13-335 chr13 21326313 21326523 + 16.5 0.000 intron (NR_103840, intron 2 of 5) CpG 7382 NR_144554 2871 Hs.719428 NR_144554 GRK6P1 GPRK6L|GPRK6P|GRK6PS G protein-coupled receptor kinase 6 pseudogene 1 pseudo chr12-1490 chr12 26198848 26199058 + 16.5 0.000 intron (NM_005086, intron 1 of 2) intron (NM_005086, intron 1 of 2) 3380 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr12-1167 chr12 26318677 26318887 + 16.5 0.000 Intergenic Intergenic 123209 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr4-1136 chr4 11698550 11698760 + 16.5 0.000 Intergenic Intergenic 70813 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr14-1490 chr14 36952745 36952955 + 16.5 0.000 promoter-TSS (NR_039725) promoter-TSS (NR_039725) -459 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr4-3009 chr4 125389809 125390019 + 16.5 0.000 intron (NM_001291303, intron 1 of 16) intron (NM_001291303, intron 1 of 16) 73502 NM_001291303 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr17-2270 chr17 20920830 20921040 + 16.5 0.000 promoter-TSS (NR_160711) promoter-TSS (NR_160711) -93 NR_160711 440416 Hs.661076 NR_104185 ENSG00000233098 CCDC144NL-AS1 - CCDC144NL antisense RNA 1 ncRNA chr3-1467 chr3 59667552 59667762 + 16.5 0.000 Intergenic Intergenic -9160 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr1-2211 chr1 99685535 99685745 + 16.5 0.000 intron (NM_017734, intron 3 of 7) MamRTE1|LINE|RTE-BovB 27313 NR_031666 100302152 NR_031666 ENSG00000221669 MIR548N MIRN548N|hsa-mir-548n microRNA 548n ncRNA chr15-778 chr15 45640742 45640952 + 16.4 0.000 intron (NM_021199, intron 1 of 9) intron (NM_021199, intron 1 of 9) 5818 NM_021199 58472 Hs.511251 NM_021199 ENSG00000137767 SQOR CGI-44|PRO1975|SQR|SQRDL sulfide quinone oxidoreductase protein-coding chr5-897 chr5 172766118 172766328 + 16.4 0.000 Intergenic Intergenic 4972 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr18-363 chr18 12838237 12838447 + 16.4 0.000 intron (NM_080423, intron 2 of 8) intron (NM_080423, intron 2 of 8) 2620 NM_001308287 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase non-receptor type 2 protein-coding chr3-1504 chr3 129665044 129665254 + 16.4 0.000 intron (NM_015008, intron 2 of 3) intron (NM_015008, intron 2 of 3) 23583 NM_001349272 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr4-461 chr4 143513205 143513415 + 16.4 0.000 promoter-TSS (NM_003601) promoter-TSS (NM_003601) -392 NM_003601 8467 Hs.558422 NM_003601 ENSG00000153147 SMARCA5 ISWI|SNF2H|WCRF135|hISWI|hSNF2H SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding chr19-1715 chr19 45667729 45667939 + 16.4 0.000 promoter-TSS (NM_000164) promoter-TSS (NM_000164) -387 NM_000164 2696 Hs.251412 NM_000164 ENSG00000010310 GIPR PGQTL2 gastric inhibitory polypeptide receptor protein-coding chr7-747 chr7 106421303 106421513 + 16.4 0.000 Intergenic Intergenic -136425 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr18-419 chr18 58672275 58672485 + 16.4 0.000 promoter-TSS (NM_001289967) promoter-TSS (NM_001289967) -507 NM_001289967 101927322 Hs.644875 NM_001289967 LOC101927322 - uncharacterized LOC101927322 protein-coding chr15-872 chr15 64574597 64574807 + 16.4 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 75282 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr3-856 chr3 50569233 50569443 + 16.4 0.000 promoter-TSS (NM_016173) promoter-TSS (NM_016173) -184 NM_016173 51409 Hs.517987 NM_016173 ENSG00000114735 HEMK1 HEMK|MTQ1 HemK methyltransferase family member 1 protein-coding chr10-2717 chr10 106387225 106387435 + 16.4 0.000 Intergenic L3|LINE|CR1 247165 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr3-498 chr3 126084118 126084328 + 16.4 0.000 promoter-TSS (NM_017836) promoter-TSS (NM_017836) 68 NM_001008486 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chr4-1306 chr4 122666941 122667151 + 16.4 0.000 intron (NR_104126, intron 10 of 10) intron (NR_104126, intron 10 of 10) -45980 NM_021803 59067 Hs.567559 NM_021803 ENSG00000138684 IL21 CVID11|IL-21|Za11 interleukin 21 protein-coding chr16-3192 chr16 84592943 84593153 + 16.4 0.000 intron (NM_021149, intron 2 of 3) MIRc|SINE|MIR 25030 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr7-1574 chr7 91265229 91265439 + 16.4 0.000 exon (NM_003505, exon 1 of 1) exon (NM_003505, exon 1 of 1) 901 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr7-1003 chr7 136086871 136087081 + 16.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -109617 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr9-874 chr9 93051790 93052000 + 16.4 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -6793 NM_001287006 203328 Hs.88417 NM_145006 ENSG00000157303 SUSD3 - sushi domain containing 3 protein-coding chr15-642 chr15 38257603 38257813 + 16.4 0.000 intron (NM_152594, intron 1 of 6) intron (NM_152594, intron 1 of 6) 4872 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr20-870 chr20 7695746 7695956 + 16.4 0.000 Intergenic Intergenic 244607 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr2-2201 chr2 65232700 65232910 + 16.4 0.000 intron (NM_001005386, intron 1 of 9) intron (NM_001005386, intron 1 of 9) 5110 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr9-2220 chr9 136722296 136722506 + 16.4 0.000 intron (NM_152421, intron 4 of 4) intron (NM_152421, intron 4 of 4) 3836 NR_002975 677824 Hs.495480 NR_002975 ENSG00000280496 SNORA17B ACA43|SNORA43 small nucleolar RNA, H/ACA box 17B snoRNA chr13-670 chr13 101876067 101876277 + 16.4 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) 40473 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr6-2902 chr6 13735913 13736123 + 16.4 0.000 Intergenic Intergenic -24183 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr2-3181 chr2 209526056 209526266 + 16.4 0.000 intron (NM_001039538, intron 2 of 14) intron (NM_001039538, intron 2 of 14) -53175 NM_001363913 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr4-845 chr4 25441617 25441827 + 16.4 0.000 Intergenic L2b|LINE|L2 64459 NM_001286756 29945 Hs.152173 NM_013367 ENSG00000053900 ANAPC4 APC4 anaphase promoting complex subunit 4 protein-coding chr16-918 chr16 88013117 88013327 + 16.4 0.000 intron (NM_001173539, intron 6 of 12) MIR|SINE|MIR 43204 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr17-770 chr17 34980493 34980703 + 16.4 0.000 promoter-TSS (NM_002311) promoter-TSS (NM_002311) 86 NM_013975 3980 Hs.100299 NM_002311 ENSG00000005156 LIG3 LIG2|LIG3alpha DNA ligase 3 protein-coding chr5-1526 chr5 158775561 158775771 + 16.4 0.000 intron (NM_001324107, intron 10 of 15) intron (NM_001324107, intron 10 of 15) 322290 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr1-2501 chr1 178538609 178538819 + 16.4 0.000 Intergenic Intergenic -4082 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 (putative) ncRNA chr22-616 chr22 25564305 25564515 + 16.4 0.000 promoter-TSS (NM_005160) promoter-TSS (NM_005160) -265 NM_001362778 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr2-2566 chr2 223047428 223047638 + 16.4 0.000 Intergenic Intergenic -4397 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr15-561 chr15 68352554 68352764 + 16.4 0.000 intron (NM_001004439, intron 7 of 29) MamTip1|DNA|hAT-Tip100 74914 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr17-1081 chr17 28643957 28644167 + 16.4 0.000 exon (NM_001321560, exon 2 of 39) exon (NM_001321560, exon 2 of 39) 1096 NM_014680 9703 Hs.151761 NM_014680 ENSG00000007202 KIAA0100 BCOX|BCOX1|CT101|FMP27 KIAA0100 protein-coding chr2-475 chr2 240566535 240566745 + 16.4 0.000 Intergenic Intergenic -1844 NM_018226 57140 Hs.5345 NM_018226 ENSG00000142327 RNPEPL1 - arginyl aminopeptidase like 1 protein-coding chr19-926 chr19 5002173 5002383 + 16.4 0.000 intron (NM_001370094, intron 1 of 10) AluSx|SINE|Alu 33165 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr9-418 chr9 71768529 71768739 + 16.4 0.000 promoter-TSS (NM_001349784) promoter-TSS (NM_001349784) -121 NM_001135820 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr2-3264 chr2 241676630 241676840 + 16.4 0.000 intron (NM_012145, intron 4 of 4) intron (NM_012145, intron 4 of 4) 10080 NM_012145 1841 Hs.471873 NM_012145 ENSG00000168393 DTYMK CDC8|PP3731|TMPK|TYMK deoxythymidylate kinase protein-coding chr16-1874 chr16 83717882 83718092 + 16.4 0.000 intron (NM_001220489, intron 9 of 12) intron (NM_001220489, intron 9 of 12) 85989 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr4-1859 chr4 159229211 159229421 + 16.4 0.000 5' UTR (NM_001351725, exon 1 of 27) 5' UTR (NM_001351725, exon 1 of 27) 833 NM_001351725 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr16-1303 chr16 86882984 86883194 + 16.4 0.000 Intergenic Intergenic 160998 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr16-1455 chr16 84177652 84177862 + 16.4 0.000 TTS (NM_001243159) TTS (NM_001243159) 9300 NM_001243156 9013 Hs.153022 NM_005679 ENSG00000103168 TAF1C MGC:39976|SL1|TAFI110|TAFI95 TATA-box binding protein associated factor, RNA polymerase I subunit C protein-coding chr6-1031 chr6 139126210 139126420 + 16.4 0.000 Intergenic MER63A|DNA|hAT-Blackjack -8765 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding chr3-4884 chr3 176092215 176092425 + 16.4 0.000 Intergenic Intergenic -152231 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA chr18-445 chr18 28658123 28658333 + 16.4 0.000 Intergenic Intergenic -481098 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr17-653 chr17 77887946 77888156 + 16.4 0.000 Intergenic CpG -3964 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr4-2134 chr4 76546918 76547128 + 16.4 0.000 intron (NM_020859, intron 1 of 10) intron (NM_020859, intron 1 of 10) -26545 NR_039654 100616299 NR_039654 ENSG00000263445 MIR4450 mir-4450 microRNA 4450 ncRNA chr17-1574 chr17 38873777 38873987 + 16.4 0.000 intron (NR_073384, intron 1 of 7) intron (NR_073384, intron 1 of 7) 3824 NM_006148 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr4-1670 chr4 142372891 142373101 + 16.4 0.000 intron (NM_001331040, intron 7 of 25) intron (NM_001331040, intron 7 of 25) 473539 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr7-2189 chr7 94303853 94304063 + 16.4 0.000 Intergenic Intergenic 88234 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr2-1828 chr2 127649752 127649962 + 16.4 0.000 intron (NM_001161416, intron 2 of 2) intron (NM_001161416, intron 2 of 2) -1604 NM_001256542 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr11-877 chr11 65096021 65096231 + 16.4 0.000 promoter-TSS (NM_013265) promoter-TSS (NM_013265) -88 NM_013265 738 Hs.277517 NM_013265 ENSG00000149823 VPS51 ANG2|ANG3|C11orf2|C11orf3|FFR VPS51 subunit of GARP complex protein-coding chr19-1520 chr19 2465557 2465767 + 16.4 0.000 Intergenic MLT2B4|LTR|ERVL -3477 NR_134931 101928602 Hs.541407 NR_134931 ENSG00000267201 LINC01775 - long intergenic non-protein coding RNA 1775 ncRNA chr8-514 chr8 123520221 123520431 + 16.4 0.000 intron (NM_148177, intron 1 of 5) GA-rich|Low_complexity|Low_complexity 11817 NM_148177 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr11-2052 chr11 68424861 68425071 + 16.4 0.000 intron (NM_002335, intron 14 of 22) intron (NM_002335, intron 14 of 22) -35786 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr3-2230 chr3 40258725 40258935 + 16.4 0.000 non-coding (NR_104316, exon 17 of 17) non-coding (NR_104316, exon 17 of 17) 50868 NR_033965 440952 Hs.660388 NR_033965 ENSG00000280739 EIF1B-AS1 - EIF1B antisense RNA 1 ncRNA chr3-1533 chr3 178320489 178320699 + 16.4 0.000 Intergenic Intergenic -98607 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr2-1705 chr2 187554235 187554445 + 16.4 0.000 promoter-TSS (NM_001329241) promoter-TSS (NM_001329241) 95 NM_001329240 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr8-533 chr8 53945039 53945249 + 16.4 0.000 intron (NM_001286673, intron 2 of 4) L1MB7|LINE|L1 64272 NR_104579 8601 Hs.368733 NM_003702 ENSG00000147509 RGS20 RGSZ1|ZGAP1|g(z)GAP|gz-GAP regulator of G protein signaling 20 protein-coding chr8-443 chr8 145026708 145026918 + 16.4 0.000 Intergenic HERVK-int|LTR|ERVK -23914 NR_023392 286101 Hs.367856 NR_023392 ZNF252P ZNF252 zinc finger protein 252, pseudogene pseudo chr2-3112 chr2 156800218 156800428 + 16.4 0.000 Intergenic Intergenic 363944 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr12-1062 chr12 120292837 120293047 + 16.4 0.000 TTS (NR_003925) TTS (NR_003925) 295 NR_003925 26835 NR_003925 ENSG00000200795 RNU4-1 RNU4A|RNU4B2|U4|U4BL RNA, U4 small nuclear 1 snRNA chr1-4055 chr1 204888419 204888629 + 16.4 0.000 intron (NM_001160332, intron 1 of 27) LTR54|LTR|ERV1 -55702 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr7-1324 chr7 959128 959338 + 16.4 0.000 Intergenic L1MB8|LINE|L1 -3826 NM_001284308 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr17-1786 chr17 68399034 68399244 + 16.4 0.000 intron (NM_001352899, intron 10 of 12) intron (NM_001352899, intron 10 of 12) -14484 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr11-1252 chr11 102446691 102446901 + 16.4 0.000 intron (NM_052932, intron 2 of 4) intron (NM_052932, intron 2 of 4) 5969 NM_052932 114908 Hs.503709 NM_052932 ENSG00000152558 TMEM123 KCT3|PORIMIN|PORMIN transmembrane protein 123 protein-coding chr17-1445 chr17 34997506 34997716 + 16.4 0.000 intron (NM_013975, intron 11 of 19) intron (NM_013975, intron 11 of 19) 17099 NM_013975 3980 Hs.100299 NM_002311 ENSG00000005156 LIG3 LIG2|LIG3alpha DNA ligase 3 protein-coding chr7-1444 chr7 56079478 56079688 + 16.4 0.000 TTS (NM_006213) TTS (NM_006213) 13413 NM_006213 5260 Hs.730821 NM_006213 ENSG00000164776 PHKG1 PHKG phosphorylase kinase catalytic subunit gamma 1 protein-coding chr6-852 chr6 7568101 7568311 + 16.4 0.000 intron (NM_001008844, intron 10 of 23) intron (NM_001008844, intron 10 of 23) -21992 NM_152551 154007 Hs.13366 NM_152551 ENSG00000168566 SNRNP48 C6orf151|dJ336K20B.1|dJ512B11.2 small nuclear ribonucleoprotein U11/U12 subunit 48 protein-coding chr1-2017 chr1 98045249 98045459 + 16.4 0.000 promoter-TSS (NR_039604) promoter-TSS (NR_039604) -3 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr6-809 chr6 43308464 43308674 + 16.4 0.000 intron (NM_206922, intron 1 of 7) intron (NM_206922, intron 1 of 7) 257 NM_206922 401262 Hs.653165 NM_206922 ENSG00000146215 CRIP3 CRP-3|TLP|TLP-A|h6LIMo cysteine rich protein 3 protein-coding chr3-1673 chr3 185677223 185677433 + 16.4 0.000 intron (NR_138486, intron 7 of 15) intron (NR_138486, intron 7 of 15) -35924 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr19-1775 chr19 19626289 19626499 + 16.4 0.000 intron (NM_004720, intron 2 of 2) L2b|LINE|L2 1826 NM_004720 9170 Hs.122575 NM_004720 ENSG00000064547 LPAR2 EDG-4|EDG4|LPA-2|LPA2 lysophosphatidic acid receptor 2 protein-coding chr10-1263 chr10 124515997 124516207 + 16.4 0.000 intron (NM_001167880, intron 5 of 5) MLT1B|LTR|ERVL-MaLR 54279 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr12-1296 chr12 123966542 123966752 + 16.4 0.000 intron (NM_001304958, intron 1 of 5) intron (NM_001304958, intron 1 of 5) 5412 NM_001304959 80212 Hs.114111 NM_025140 ENSG00000119242 CCDC92 - coiled-coil domain containing 92 protein-coding chr9-1861 chr9 68493974 68494184 + 16.4 0.000 intron (NM_021965, intron 9 of 10) MamGypsy2-I|LTR|Gypsy 46788 NM_153237 169693 Hs.663056 NM_153237 ENSG00000181778 TMEM252 C9orf71 transmembrane protein 252 protein-coding chr9-1796 chr9 27087406 27087616 + 16.4 0.000 Intergenic Intergenic -21630 NM_001290078 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr4-1023 chr4 8479343 8479553 + 16.4 0.000 Intergenic Tigger3|DNA|TcMar-Tigger 38651 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr18-562 chr18 10378713 10378923 + 16.4 0.000 Intergenic Intergenic 35552 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr14-560 chr14 22977935 22978145 + 16.4 0.000 TTS (NM_001289097) TTS (NM_001289097) -1198 NM_198086 84962 Hs.655832 NM_032876 ENSG00000129474 AJUBA JUB ajuba LIM protein protein-coding chr10-1413 chr10 104937661 104937871 + 16.4 0.000 intron (NM_014978, intron 3 of 26) intron (NM_014978, intron 3 of 26) -271550 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr16-1848 chr16 68889829 68890039 + 16.4 0.000 intron (NM_024562, intron 7 of 17) intron (NM_024562, intron 7 of 17) 46403 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr6-857 chr6 27091862 27092072 + 16.4 0.000 Intergenic Intergenic 40829 NM_021058 8970 Hs.591807 NM_021058 ENSG00000124635 HIST1H2BJ H2B/r|H2BFR|H2BJ histone cluster 1 H2B family member j protein-coding chr6-406 chr6 149746307 149746517 + 16.4 0.000 non-coding (NR_104456, exon 1 of 9) non-coding (NR_104456, exon 1 of 9) 117 NR_104456 348995 Hs.510375 NM_024647 ENSG00000120253 NUP43 bA350J20.1|p42 nucleoporin 43 protein-coding chr19-1398 chr19 19400213 19400423 + 16.4 0.000 intron (NM_001359631, intron 1 of 10) intron (NM_001359631, intron 1 of 10) 14515 NM_001359631 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr12-1498 chr12 49539691 49539901 + 16.4 0.000 intron (NM_001314030, intron 1 of 14) CpG-5521 766 NM_012284 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr5-456 chr5 141636826 141637036 + 16.4 0.000 promoter-TSS (NM_003883) promoter-TSS (NM_003883) -19 NM_001130029 285613 Hs.120094 NM_173828 ENSG00000164620 RELL2 C5orf16 RELT like 2 protein-coding chr1-3176 chr1 95002609 95002819 + 16.4 0.000 intron (NM_144988, intron 3 of 3) intron (NM_144988, intron 3 of 3) -58882 NR_132786 101928098 Hs.730090 NR_132786 ENSG00000230427 LOC101928098 - uncharacterized LOC101928098 ncRNA chr17-797 chr17 40140535 40140745 + 16.4 0.000 exon (NM_007359, exon 1 of 14) exon (NM_007359, exon 1 of 14) 103 NM_007359 22794 Hs.743287 NM_007359 ENSG00000108349 CASC3 BTZ|MLN51 CASC3 exon junction complex subunit protein-coding chr9-695 chr9 132769063 132769273 + 16.4 0.000 intron (NM_001317959, intron 13 of 14) MIR3|SINE|MIR 98704 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr1-1378 chr1 89633364 89633574 + 16.4 0.000 promoter-TSS (NR_033981) promoter-TSS (NR_033981) 349 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr21-409 chr21 42811997 42812207 + 16.4 0.000 Intergenic LTR21A|LTR|ERV1 -32108 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr18-91 chr18 48161539 48161749 + 16.4 0.000 intron (NM_001371291, intron 4 of 6) CpG -24496 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr14-526 chr14 75126818 75127028 + 16.4 0.000 5' UTR (NM_001329238, exon 1 of 22) 5' UTR (NM_001329238, exon 1 of 22) 125 NM_001329237 91754 Hs.7200 NM_033116 ENSG00000119638 NEK9 APUG|LCCS10|NC|NERCC|NERCC1 NIMA related kinase 9 protein-coding chr16-861 chr16 88238766 88238976 + 16.4 0.000 Intergenic Intergenic 44590 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr7-1953 chr7 91830189 91830399 + 16.4 0.000 Intergenic Intergenic 50408 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr13-454 chr13 101307398 101307608 + 16.4 0.000 intron (NM_001350749, intron 7 of 43) MIRb|SINE|MIR 109005 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr12-1479 chr12 11823206 11823416 + 16.4 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 173457 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr4-452 chr4 123588040 123588250 + 16.4 0.000 Intergenic Intergenic -61846 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr1-2054 chr1 1894591 1894801 + 16.4 0.000 Intergenic Intergenic -3579 NM_001282538 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr12-975 chr12 46524146 46524356 + 16.4 0.000 intron (NR_125380, intron 3 of 3) intron (NR_125380, intron 3 of 3) 140144 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr14-628 chr14 32225172 32225382 + 16.4 0.000 Intergenic X6A_LINE|LINE|CR1 -22008 NR_004394 26827 NR_004394 ENSG00000206625 RNU6-1 RNU6|RNU6A|U6|U6-1 RNA, U6 small nuclear 1 snRNA chr20-1434 chr20 44190388 44190598 + 16.4 0.000 Intergenic AluJb|SINE|Alu -2915 NM_020433 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr21-177 chr21 46294827 46295037 + 16.4 0.000 intron (NM_001314025, intron 3 of 4) intron (NM_001314025, intron 3 of 4) 8590 NM_058181 54059 Hs.474066 NM_058181 ENSG00000182362 YBEY C21orf57 ybeY metalloendoribonuclease protein-coding chr13-477 chr13 50016386 50016596 + 16.4 0.000 3' UTR (NM_213590, exon 2 of 2) 3' UTR (NM_213590, exon 2 of 2) 1047 NM_199464 283518 Hs.660161 NM_173605 ENSG00000198553 KCNRG DLTET potassium channel regulator protein-coding chr7-709 chr7 30135627 30135837 + 16.4 0.000 intron (NM_152793, intron 1 of 2) CpG 746 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr6-1565 chr6 972436 972646 + 16.4 0.000 intron (NR_027116, intron 2 of 3) MER5B|DNA|hAT-Charlie 104043 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr11-856 chr11 61816959 61817169 + 16.4 0.000 promoter-TSS (NM_013402) promoter-TSS (NM_013402) -61 NM_013402 3992 Hs.503546 NM_013402 ENSG00000149485 FADS1 D5D|FADS6|FADSD5|LLCDL1|TU12 fatty acid desaturase 1 protein-coding chr2-1385 chr2 44325086 44325296 + 16.4 0.000 intron (NM_006036, intron 10 of 13) intron (NM_006036, intron 10 of 13) 34558 NM_001042385 9581 Hs.444349 NM_006036 ENSG00000138078 PREPL CMS22 prolyl endopeptidase like protein-coding chr6-666 chr6 83092932 83093142 + 16.4 0.000 intron (NM_015018, intron 1 of 38) intron (NM_015018, intron 1 of 38) 25371 NM_001199942 23033 Hs.520246 NM_015018 ENSG00000083097 DOP1A DOP1|DOPEY1|KIAA1117|dJ202D23.2 DOP1 leucine zipper like protein A protein-coding chr1-3170 chr1 89262715 89262925 + 16.4 0.000 intron (NM_001134486, intron 8 of 10) intron (NM_001134486, intron 8 of 10) 10040 NM_001134486 115362 Hs.513726 NM_052942 ENSG00000154451 GBP5 GBP-5 guanylate binding protein 5 protein-coding chr16-818 chr16 68085666 68085876 + 16.4 0.000 exon (NM_173165, exon 1 of 10) exon (NM_173165, exon 1 of 10) 401 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr10-3326 chr10 6401747 6401957 + 16.4 0.000 intron (NM_001323267, intron 17 of 17) intron (NM_001323267, intron 17 of 17) 51536 NR_148966 399716 Hs.737229 NR_148966 LINC02656 - long intergenic non-protein coding RNA 2656 ncRNA chr17-1086 chr17 43591868 43592078 + 16.4 0.000 Intergenic Intergenic -45633 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr3-1164 chr3 131350022 131350232 + 16.4 0.000 3' UTR (NM_001353038, exon 19 of 19) 3' UTR (NM_001353038, exon 19 of 19) -11718 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr1-2765 chr1 89363258 89363468 + 16.4 0.000 promoter-TSS (NM_001320257) promoter-TSS (NM_001320257) -514 NM_198460 163351 Hs.254338 NM_198460 ENSG00000183347 GBP6 - guanylate binding protein family member 6 protein-coding chr9-940 chr9 111038519 111038729 + 16.4 0.000 promoter-TSS (NM_001401) promoter-TSS (NM_001401) 116 NM_001351402 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr2-2545 chr2 207505783 207505993 + 16.4 0.000 Intergenic Intergenic -24074 NR_163947 chr3-933 chr3 81761024 81761234 + 16.4 0.000 intron (NM_000158, intron 1 of 15) intron (NM_000158, intron 1 of 15) 516 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr15-787 chr15 56174783 56174993 + 16.4 0.000 intron (NM_001368073, intron 2 of 8) L1MEc|LINE|L1 15044 NM_001368074 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr11-865 chr11 127000473 127000683 + 16.4 0.000 5' UTR (NM_032531, exon 1 of 17) 5' UTR (NM_032531, exon 1 of 17) 192 NM_032531 84623 Hs.376015 NM_032531 ENSG00000149571 KIRREL3 KIRRE|MRD4|NEPH2|PRO4502 kirre like nephrin family adhesion molecule 3 protein-coding chr11-1465 chr11 93908794 93909004 + 16.4 0.000 Intergenic MLT2D|LTR|ERVL -58281 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr16-998 chr16 30355507 30355717 + 16.4 0.000 promoter-TSS (NM_006110) promoter-TSS (NM_006110) -304 NM_006110 10421 Hs.202677 NM_006110 ENSG00000169217 CD2BP2 FWP010|LIN1|PPP1R59|Snu40|U5-52K CD2 cytoplasmic tail binding protein 2 protein-coding chr16-1523 chr16 51374523 51374733 + 16.4 0.000 intron (NR_039672, intron 6 of 6) intron (NR_039672, intron 6 of 6) -223356 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr3-891 chr3 49802798 49803008 + 16.4 0.000 promoter-TSS (NM_001366281) promoter-TSS (NM_001366281) -358 NM_001366281 389119 Hs.86674 NM_203370 ENSG00000185614 INKA1 C3orf54|FAM212A inka box actin regulator 1 protein-coding chr8-1538 chr8 97971289 97971499 + 16.4 0.000 intron (NM_002380, intron 5 of 18) intron (NM_002380, intron 5 of 18) 70823 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr14-963 chr14 63186612 63186822 + 16.4 0.000 Intergenic Intergenic -17726 NM_020663 57381 Hs.656339 NM_020663 ENSG00000126785 RHOJ ARHJ|RASL7B|TC10B|TCL ras homolog family member J protein-coding chr13-385 chr13 27121150 27121360 + 16.4 0.000 intron (NM_182488, intron 1 of 8) L1MEd|LINE|L1 -4278 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr8-667 chr8 43171807 43172017 + 16.4 0.000 intron (NM_152419, intron 7 of 17) MIRb|SINE|MIR 31448 NM_001363228 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr1-2622 chr1 101293630 101293840 + 16.4 0.000 Intergenic Intergenic -30102 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr1-2911 chr1 19620795 19621005 + 16.4 0.000 intron (NR_033758, intron 2 of 4) intron (NR_033758, intron 2 of 4) 13093 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo chr8-888 chr8 38408829 38409039 + 16.4 0.000 3' UTR (NM_001286819, exon 11 of 11) 3' UTR (NM_001286819, exon 11 of 11) 21803 NM_001199660 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 SLC55A2 leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr17-1558 chr17 8187657 8187867 + 16.4 0.000 TTS (NM_017622) TTS (NM_017622) 817 NR_039746 100616406 NR_039746 ENSG00000283160 MIR4521 mir-4521 microRNA 4521 ncRNA chr14-284 chr14 49767996 49768206 + 16.4 0.000 promoter-TSS (NM_014315) promoter-TSS (NM_014315) -52 NM_014315 23588 Hs.509264 NM_014315 ENSG00000165516 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding chr12-1114 chr12 29591253 29591463 + 16.4 0.000 intron (NM_001367875, intron 9 of 19) intron (NM_001367875, intron 9 of 19) -91665 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding chr16-1506 chr16 21104143 21104353 + 16.4 0.000 intron (NM_001347886, intron 16 of 61) intron (NM_001347886, intron 16 of 61) 46598 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr4-290 chr4 87220536 87220746 + 16.4 0.000 promoter-TSS (NR_120447) promoter-TSS (NR_120447) -23 NR_120447 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chrX-97 chrX 129931543 129931753 + 16.4 0.000 Intergenic CpG 25484 NM_006649 10813 Hs.458598 NM_006649 ENSG00000156697 UTP14A NYCO16|SDCCAG16|Utp14|dJ537K23.3 UTP14A small subunit processome component protein-coding chr11-1557 chr11 64835933 64836143 + 16.4 0.000 intron (NM_017525, intron 13 of 36) intron (NM_017525, intron 13 of 36) 8615 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr19-1221 chr19 9796203 9796413 + 16.4 0.000 Intergenic MER66C|LTR|ERV1 -3128 NR_148545 100505555 Hs.445295 NR_148545 ENSG00000196605 LOC100505555 - uncharacterized LOC100505555 ncRNA chr17-1191 chr17 67289579 67289789 + 16.4 0.000 Intergenic Intergenic -44488 NM_001330447 9931 Hs.370140 NM_014877 ENSG00000198265 HELZ DHRC|DRHC|HUMORF5 helicase with zinc finger protein-coding chr2-1434 chr2 215784336 215784546 + 16.4 0.000 intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 59095 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr10-1503 chr10 13972052 13972262 + 16.4 0.000 promoter-TSS (NM_001318337) promoter-TSS (NM_001318337) -261 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr19-952 chr19 2523743 2523953 + 16.4 0.000 intron (NM_052847, intron 3 of 4) intron (NM_052847, intron 3 of 4) 47721 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr3-2353 chr3 151122636 151122846 + 16.4 0.000 intron (NM_053002, intron 2 of 42) intron (NM_053002, intron 2 of 42) 35943 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr4-1072 chr4 124481467 124481677 + 16.4 0.000 Intergenic Intergenic 76862 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chrX-785 chrX 46601406 46601616 + 16.4 0.000 3' UTR (NM_032591, exon 17 of 17) 3' UTR (NM_032591, exon 17 of 17) 27746 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chr5-1079 chr5 10078188 10078398 + 16.4 0.000 Intergenic Intergenic 171595 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr10-2052 chr10 90985951 90986161 + 16.4 0.000 intron (NR_131214, intron 4 of 5) MIR3|SINE|MIR 38756 NR_131214 105378427 NR_131214 XLOC_008559 - uncharacterized LOC105378427 ncRNA chr2-2216 chr2 108584151 108584361 + 16.4 0.000 intron (NM_001193483, intron 1 of 9) L2b|LINE|L2 -4050 NM_004987 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr1-2074 chr1 33338651 33338861 + 16.4 0.000 intron (NM_198040, intron 8 of 13) intron (NM_198040, intron 8 of 13) -6264 NR_037400 100500853 NR_037400 ENSG00000284154 MIR3605 mir-3605 microRNA 3605 ncRNA chr8-1029 chr8 28640902 28641112 + 16.4 0.000 Intergenic Intergenic 60457 NR_126027 101929402 Hs.667366 NR_126027 ENSG00000246339 EXTL3-AS1 C8orf50 EXTL3 antisense RNA 1 ncRNA chr20-1631 chr20 17655387 17655597 + 16.4 0.000 intron (NM_001042576, intron 4 of 25) intron (NM_001042576, intron 4 of 25) 26750 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr10-1443 chr10 58435385 58435595 + 16.4 0.000 Intergenic Intergenic 50080 NM_003201 7019 Hs.594250 NM_003201 ENSG00000108064 TFAM MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 transcription factor A, mitochondrial protein-coding chr3-923 chr3 52087146 52087356 + 16.4 0.000 intron (NM_001161580, intron 9 of 9) intron (NM_001161580, intron 9 of 9) -22139 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA chr8-712 chr8 145051681 145051891 + 16.4 0.000 promoter-TSS (NM_023080) promoter-TSS (NM_023080) -681 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding chr7-2114 chr7 18495707 18495917 + 16.4 0.000 promoter-TSS (NM_001321886) promoter-TSS (NM_001321886) 63 NM_001321886 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr1-1000 chr1 28668533 28668743 + 16.4 0.000 promoter-TSS (NM_006582) promoter-TSS (NM_006582) -146 NM_001319674 10691 Hs.632373 NM_006582 ENSG00000162419 GMEB1 P96PIF|PIF96 glucocorticoid modulatory element binding protein 1 protein-coding chr10-1374 chr10 4663127 4663337 + 16.4 0.000 TTS (NR_015425) TTS (NR_015425) 7076 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA chrX-312 chrX 86047374 86047584 + 16.4 0.000 promoter-TSS (NM_000390) promoter-TSS (NM_000390) 79 NM_001145414 1121 Hs.496449 NM_000390 ENSG00000188419 CHM DXS540|GGTA|HSD-32|REP-1|TCD CHM Rab escort protein protein-coding chr5-991 chr5 39283331 39283541 + 16.4 0.000 TTS (NM_001737) TTS (NM_001737) -12787 NM_001243093 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr3-1375 chr3 49973405 49973615 + 16.4 0.000 intron (NM_001349192, intron 4 of 22) intron (NM_001349192, intron 4 of 22) 33360 NM_001349190 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr18-225 chr18 48922803 48923013 + 16.4 0.000 intron (NM_001190822, intron 3 of 3) intron (NM_001190822, intron 3 of 3) 19899 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr12-1416 chr12 45284005 45284215 + 16.4 0.000 intron (NM_001204803, intron 2 of 20) MER39B|LTR|ERV1 -8580 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chrX-137 chrX 53684144 53684354 + 16.4 0.000 intron (NM_031407, intron 2 of 83) CpG 2470 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr16-576 chr16 89240944 89241154 + 16.4 0.000 Intergenic CpG 23346 NM_182531 197320 Hs.647385 NM_182531 ENSG00000170100 ZNF778 - zinc finger protein 778 protein-coding chr5-1049 chr5 40224134 40224344 + 16.4 0.000 Intergenic Intergenic 171948 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr15-863 chr15 40006738 40006948 + 16.4 0.000 intron (NM_001013703, intron 23 of 38) intron (NM_001013703, intron 23 of 38) 32338 NM_003134 6727 Hs.533732 NM_003134 ENSG00000140319 SRP14 ALURBP signal recognition particle 14 protein-coding chr16-869 chr16 2184495 2184705 + 16.4 0.000 intron (NM_020764, intron 14 of 19) (CA)n|Simple_repeat|Simple_repeat 12005 NM_020764 57524 Hs.643537 NM_020764 ENSG00000167971 CASKIN1 ANKS5A CASK interacting protein 1 protein-coding chr16-1246 chr16 2190226 2190436 + 16.4 0.000 exon (NM_020764, exon 2 of 20) exon (NM_020764, exon 2 of 20) 6274 NM_020764 57524 Hs.643537 NM_020764 ENSG00000167971 CASKIN1 ANKS5A CASK interacting protein 1 protein-coding chr21-123 chr21 45579168 45579378 + 16.4 0.000 Intergenic Intergenic -14381 NR_146912 105372840 Hs.406003 NR_146912 ENSG00000233922 LINC01694 - long intergenic non-protein coding RNA 1694 ncRNA chr3-664 chr3 149752272 149752482 + 16.4 0.000 intron (NR_135149, intron 1 of 4) CpG-20380 112 NM_016094 51122 Hs.432729 NM_016094 ENSG00000114744 COMMD2 HSPC042 COMM domain containing 2 protein-coding chr15-421 chr15 67840361 67840571 + 16.4 0.000 promoter-TSS (NR_104080).5 promoter-TSS (NR_104080).5 -421 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr12-573 chr12 68610499 68610709 + 16.4 0.000 promoter-TSS (NM_001251917) promoter-TSS (NM_001251917) -295 NM_001251918 5908 Hs.369920 NM_015646 ENSG00000127314 RAP1B K-REV|RAL1B RAP1B, member of RAS oncogene family protein-coding chr9-1139 chr9 129750419 129750629 + 16.4 0.000 intron (NM_004878, intron 1 of 2) intron (NM_004878, intron 1 of 2) 2518 NM_004878 9536 Hs.146688 NM_004878 ENSG00000148344 PTGES MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1 prostaglandin E synthase protein-coding chr9-1433 chr9 133731119 133731329 + 16.4 0.000 intron (NM_001134707, intron 4 of 20) intron (NM_001134707, intron 4 of 20) 7128 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr3-631 chr3 45593217 45593427 + 16.4 0.000 Intergenic Intergenic -1429 NM_014240 8994 Hs.193370 NM_014240 ENSG00000144791 LIMD1 - LIM domains containing 1 protein-coding chr12-817 chr12 2895152 2895362 + 16.4 0.000 intron (NM_003324, intron 1 of 10) intron (NM_003324, intron 1 of 10) 4366 NM_001160408 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 TUB like protein 3 protein-coding chr10-1180 chr10 73730339 73730549 + 16.4 0.000 promoter-TSS (NR_026592) promoter-TSS (NR_026592) 62 NR_160427 113939925 NR_160425 BMS1P4-AGAP5 - BMS1P4-AGAP5 readthough pseudo chrX-227 chrX 74536347 74536557 + 16.4 0.000 Intergenic CpG 78172 NM_016120 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr11-1023 chr11 95090388 95090598 + 16.4 0.000 intron (NM_015036, intron 1 of 1) intron (NM_015036, intron 1 of 1) 647 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding chr7-1199 chr7 55125279 55125489 + 16.4 0.000 intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 15545 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr17-1508 chr17 42483168 42483378 + 16.4 0.000 intron (NM_005177, intron 9 of 20) intron (NM_005177, intron 9 of 20) -11500 NR_049845 100847030 NR_049845 ENSG00000264314 MIR548AT - microRNA 548at ncRNA chr1-3088 chr1 30331856 30332066 + 16.4 0.000 Intergenic MIRb|SINE|MIR -294349 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr1-3912 chr1 76501392 76501602 + 16.4 0.000 intron (NM_001349109, intron 3 of 3) intron (NM_001349109, intron 3 of 3) 277770 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr22-440 chr22 30420482 30420692 + 16.4 0.000 intron (NM_001204204, intron 9 of 9) intron (NM_001204204, intron 9 of 9) -5181 NM_001003704 51537 Hs.713636 NM_016498 ENSG00000242114 MTFP1 HSPC242|MTP18 mitochondrial fission process 1 protein-coding chr2-3039 chr2 73870235 73870445 + 16.4 0.000 non-coding (NR_148668, exon 11 of 13) non-coding (NR_148668, exon 11 of 13) -22668 NM_001615 72 Hs.516105 NM_001615 ENSG00000163017 ACTG2 ACT|ACTA3|ACTE|ACTL3|ACTSG|VSCM actin gamma 2, smooth muscle protein-coding chr10-909 chr10 69337605 69337815 + 16.4 0.000 intron (NM_001322367, intron 1 of 16) intron (NM_001322367, intron 1 of 16) 18863 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr5-259 chr5 177312226 177312436 + 16.4 0.000 promoter-TSS (NM_031300) promoter-TSS (NM_031300) -433 NM_001142935 83463 Hs.743332 NM_031300 ENSG00000213347 MXD3 BHLHC13|MAD3|MYX MAX dimerization protein 3 protein-coding chr6-575 chr6 85593274 85593484 + 16.4 0.000 intron (NM_001350532, intron 1 of 29) intron (NM_001350532, intron 1 of 29) 479 NM_153816 57231 Hs.485871 NM_020468 ENSG00000135317 SNX14 RGS-PX2|SCAR20 sorting nexin 14 protein-coding chr3-603 chr3 10357649 10357859 + 16.4 0.000 intron (NM_001001331, intron 14 of 22) intron (NM_001001331, intron 14 of 22) 27525 NR_036084 100422933 NR_036084 ENSG00000264534 MIR378B - microRNA 378b ncRNA chr18-282 chr18 36694192 36694402 + 16.4 0.000 intron (NM_001281740, intron 17 of 28) intron (NM_001281740, intron 17 of 28) -30879 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr10-2192 chr10 27820302 27820512 + 16.4 0.000 intron (NM_018076, intron 19 of 19) intron (NM_018076, intron 19 of 19) -74588 NM_001242702 283078 Hs.128193 NM_173576 ENSG00000150051 MKX C10orf48|IFRX|IRXL1 mohawk homeobox protein-coding chr5-812 chr5 137889217 137889427 + 16.4 0.000 promoter-TSS (NM_014386) promoter-TSS (NM_014386) -135 NM_001258448 27039 Hs.716884 NM_014386 ENSG00000078795 PKD2L2 TRPP5 polycystin 2 like 2, transient receptor potential cation channel protein-coding chr18-337 chr18 48942656 48942866 + 16.4 0.000 promoter-TSS (NM_001190823) promoter-TSS (NM_001190823) 46 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr9-538 chr9 125261709 125261919 + 16.4 0.000 promoter-TSS (NM_001354299) promoter-TSS (NM_001354299) -12 NM_001354295 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr13-200 chr13 113208701 113208911 + 16.4 0.000 promoter-TSS (NM_001320656) promoter-TSS (NM_001320656) 34 NM_001354939 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr8-988 chr8 123413007 123413217 + 16.4 0.000 Intergenic MER67B|LTR|ERV1 -3613 NM_001283027 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr4-1164 chr4 180932587 180932797 + 16.4 0.000 Intergenic HAL1b|LINE|L1 226457 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr1-772 chr1 193105397 193105607 + 16.4 0.000 promoter-TSS (NM_197962) promoter-TSS (NM_197962) -24 NM_197962 51022 Hs.458283 NM_016066 ENSG00000023572 GLRX2 CGI-133|GRX2 glutaredoxin 2 protein-coding chr6-1207 chr6 38349960 38350170 + 16.4 0.000 intron (NM_052893, intron 7 of 11) intron (NM_052893, intron 7 of 11) -131531 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr2-2394 chr2 13653052 13653262 + 16.4 0.000 Intergenic LTR16E1|LTR|ERVL -646144 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr6-614 chr6 7140982 7141192 + 16.4 0.000 intron (NM_001003699, intron 1 of 12) CpG 33126 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr2-1366 chr2 9630284 9630494 + 16.4 0.000 exon (NM_006826, exon 2 of 6) exon (NM_006826, exon 2 of 6) 608 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr5-431 chr5 174724409 174724619 + 16.4 0.000 promoter-TSS (NM_001363626) promoter-TSS (NM_001363626) -68 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr1-2019 chr1 112619741 112619951 + 16.4 0.000 promoter-TSS (NM_138729) promoter-TSS (NM_138729) 14 NM_006135 829 Hs.744974 NM_006135 ENSG00000116489 CAPZA1 CAPPA1|CAPZ|CAZ1 capping actin protein of muscle Z-line subunit alpha 1 protein-coding chr8-1218 chr8 102814733 102814943 + 16.4 0.000 Intergenic Intergenic 8016 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr10-960 chr10 50286616 50286826 + 16.4 0.000 Intergenic Intergenic -38111 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr5-501 chr5 181223396 181223606 + 16.4 0.000 promoter-TSS (NR_039781) promoter-TSS (NR_039781) 220 NR_045218 90933 Hs.441488 NM_033549 ENSG00000146063 TRIM41 RINCK tripartite motif containing 41 protein-coding chr15-525 chr15 49155079 49155289 + 16.4 0.000 promoter-TSS (NM_001352048) promoter-TSS (NM_001352048) 415 NM_001143887 9318 Hs.369614 NM_004236 ENSG00000166200 COPS2 ALIEN|CSN2|SGN2|TRIP15 COP9 signalosome subunit 2 protein-coding chrX-260 chrX 11665329 11665539 + 16.4 0.000 non-coding (NR_109776, exon 1 of 15) non-coding (NR_109776, exon 1 of 15) 486 NR_109776 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr17-1141 chr17 76529528 76529738 + 16.4 0.000 intron (NM_134268, intron 3 of 3) intron (NM_134268, intron 3 of 3) 2047 NR_033357 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 photoreceptor disc component protein-coding chr1-2692 chr1 207052979 207053189 + 16.4 0.000 promoter-TSS (NM_001018053) promoter-TSS (NM_001018053) -104 NM_001276320 55432 Hs.567533 NM_018566 ENSG00000180667 YOD1 DUBA8|OTUD2|PRO0907 YOD1 deubiquitinase protein-coding chr1-2719 chr1 248821160 248821370 + 16.4 0.000 intron (NM_001322462, intron 1 of 8) intron (NM_001322462, intron 1 of 8) 4101 NM_001322462 80851 Hs.298573 NM_030645 ENSG00000175137 SH3BP5L - SH3 binding domain protein 5 like protein-coding chr17-1417 chr17 80647877 80648087 + 16.4 0.000 intron (NM_020761, intron 3 of 33) Tigger19a|DNA|TcMar-Tigger 103144 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr17-1219 chr17 29588600 29588810 + 16.4 0.000 intron (NM_014030, intron 1 of 19) CpG 943 NM_001085454 28964 Hs.514051 NM_014030 ENSG00000108262 GIT1 - GIT ArfGAP 1 protein-coding chr16-2207 chr16 85203665 85203875 + 16.4 0.000 Intergenic AluJo|SINE|Alu -4026 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr7-676 chr7 76047885 76048095 + 16.4 0.000 promoter-TSS (NM_001317788) promoter-TSS (NM_001317788) 10 NM_001317785 51657 Hs.11615 NM_016086 ENSG00000127952 STYXL1 DUSP24|MK-STYX|MKSTYX serine/threonine/tyrosine interacting like 1 protein-coding chr7-1716 chr7 2476190 2476400 + 16.4 0.000 promoter-TSS (NM_001291784) promoter-TSS (NM_001291784) 88 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr4-179 chr4 6782692 6782902 + 16.4 0.000 promoter-TSS (NM_014743) promoter-TSS (NM_014743) 65 NM_001100590 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr22-783 chr22 44151832 44152042 + 16.4 0.000 intron (NM_001243385, intron 10 of 12) MLT1C|LTR|ERVL-MaLR -21019 NM_001137605 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr17-1613 chr17 78013716 78013926 + 16.4 0.000 intron (NM_018996, intron 2 of 20) L2b|LINE|L2 9584 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr2-3308 chr2 110747984 110748194 + 16.4 0.000 intron (NM_001371254, intron 1 of 18) intron (NM_001371254, intron 1 of 18) 15516 NM_001371254 chr1-1366 chr1 34985129 34985339 + 16.4 0.000 TTS (NM_007167) TTS (NM_007167) 113 NM_001195156 100506144 Hs.533986 NM_001195156 ENSG00000243749 TMEM35B ZMYM6NB transmembrane protein 35B protein-coding chr1-5480 chr1 112715323 112715533 + 16.4 0.000 promoter-TSS (NM_005167) promoter-TSS (NM_005167) -100 NM_005167 333926 Hs.655231 NM_005167 ENSG00000155367 PPM1J PP2CZ|PP2Czeta|PPP2CZ protein phosphatase, Mg2+/Mn2+ dependent 1J protein-coding chr7-1403 chr7 12686694 12686904 + 16.4 0.000 promoter-TSS (NM_001037164) promoter-TSS (NM_001037164) -28 NM_212460 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr6-1383 chr6 100269398 100269608 + 16.4 0.000 Intergenic Intergenic 194172 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr18-510 chr18 39485770 39485980 + 16.4 0.000 intron (NR_024391, intron 3 of 3) intron (NR_024391, intron 3 of 3) 136300 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr16-1438 chr16 64398121 64398331 + 16.4 0.000 Intergenic Intergenic 723837 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-1499 chr1 8197788 8197998 + 16.4 0.000 Intergenic Intergenic -10779 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr9-1456 chr9 137218248 137218458 + 16.4 0.000 3' UTR (NM_014434, exon 14 of 14) 3' UTR (NM_014434, exon 14 of 14) 2970 NM_031297 727800 Hs.512767 NM_031297 ENSG00000212864 RNF208 - ring finger protein 208 protein-coding chr1-3555 chr1 234674461 234674671 + 16.4 0.000 Intergenic LTR88b|LTR|Gypsy? 28277 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr2-1812 chr2 54983517 54983727 + 16.4 0.000 intron (NM_020532, intron 4 of 8) intron (NM_020532, intron 4 of 8) 26650 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr13-371 chr13 23579303 23579513 + 16.4 0.000 promoter-TSS (NM_001204458) promoter-TSS (NM_001204458) 48 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr2-3223 chr2 228827148 228827358 + 16.4 0.000 Intergenic Intergenic -215858 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr19-1861 chr19 18058303 18058513 + 16.4 0.000 TTS (NM_001290023) TTS (NM_001290023) 28526 NM_153701 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr2-2507 chr2 165293674 165293884 + 16.4 0.000 promoter-TSS (NM_021007) promoter-TSS (NM_021007) -276 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr7-2872 chr7 116543769 116543979 + 16.4 0.000 intron (NM_001753, intron 2 of 2) intron (NM_001753, intron 2 of 2) 17512 NM_001172897 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr9-1266 chr9 132300186 132300396 + 16.4 0.000 intron (NM_001351527, intron 12 of 25) intron (NM_001351527, intron 12 of 25) 54565 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr2-4139 chr2 169963866 169964076 + 16.4 0.000 intron (NM_172070, intron 24 of 38) L1MC4|LINE|L1 136463 NM_172070 130507 Hs.379548 NM_172070 ENSG00000144357 UBR3 ZNF650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding chr21-496 chr21 25736204 25736414 + 16.4 0.000 promoter-TSS (NM_001685) promoter-TSS (NM_001685) -655 NM_001003703 522 Hs.246310 NM_001685 ENSG00000154723 ATP5PF ATP5|ATP5A|ATP5J|ATPM|CF6|F6 ATP synthase peripheral stalk subunit F6 protein-coding chr2-2487 chr2 141341598 141341808 + 16.4 0.000 intron (NM_018557, intron 3 of 90) MLT1J2|LTR|ERVL-MaLR -755018 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr18-677 chr18 60391986 60392196 + 16.4 0.000 Intergenic Intergenic -19316 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr8-1242 chr8 123911692 123911902 + 16.4 0.000 intron (NM_001039112, intron 1 of 40) MIR3|SINE|MIR 59810 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chr9-796 chr9 137448695 137448905 + 16.4 0.000 3' UTR (NM_001178064, exon 15 of 15) 3' UTR (NM_001178064, exon 15 of 15) 1286 NR_106964 102466223 NR_106964 ENSG00000284317 MIR7114 hsa-mir-7114 microRNA 7114 ncRNA chr3-1777 chr3 11438702 11438912 + 16.4 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 129991 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr6-2687 chr6 22367382 22367592 + 16.4 0.000 Intergenic Intergenic -64652 NM_001163558 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr15-669 chr15 72320225 72320435 + 16.4 0.000 promoter-TSS (NM_001172684) promoter-TSS (NM_001172684) -173 NM_052840 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr3-1052 chr3 8539023 8539233 + 16.4 0.000 intron (NM_014583, intron 3 of 5) intron (NM_014583, intron 3 of 5) -32654 NR_024065 29931 Hs.433151 NM_013343 LINC00312 ERR-10|ERR10|LMCD1DN|LOH3CR2A|NAG-7|NAG7|NCRNA00312 long intergenic non-protein coding RNA 312 ncRNA chr3-1922 chr3 183489528 183489738 + 16.4 0.000 3' UTR (NM_130446, exon 7 of 7) 3' UTR (NM_130446, exon 7 of 7) 35819 NR_145763 109617007 NR_145763 ENSG00000199363 SNORA63E - small nucleolar RNA, H/ACA box 63E snoRNA chr9-701 chr9 33816645 33816855 + 16.4 0.000 promoter-TSS (NM_017811) promoter-TSS (NM_017811) -410 NM_017811 54926 Hs.643648 NM_017811 ENSG00000107341 UBE2R2 CDC34B|E2-CDC34B|UBC3B ubiquitin conjugating enzyme E2 R2 protein-coding chr11-1282 chr11 74138707 74138917 + 16.4 0.000 exon (NM_015531, exon 5 of 31) exon (NM_015531, exon 5 of 31) 32190 NM_015531 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 domain containing 3 centriole elongation regulator protein-coding chr7-1603 chr7 836415 836625 + 16.4 0.000 intron (NM_001367695, intron 2 of 19) MLT2B4|LTR|ERVL 4044 NM_001130965 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr20-891 chr20 35995052 35995262 + 16.4 0.000 intron (NM_001365709, intron 8 of 11) intron (NM_001365709, intron 8 of 11) 26567 NM_080834 140894 Hs.732697 NM_080834 ENSG00000149646 CNBD2 C20orf152|CNMPD1 cyclic nucleotide binding domain containing 2 protein-coding chr8-635 chr8 40208244 40208454 + 16.3 0.000 Intergenic Intergenic 54867 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr7-2385 chr7 42856982 42857192 + 16.3 0.000 Intergenic Intergenic 54756 NM_001363436 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr9-1643 chr9 136797131 136797341 + 16.3 0.000 intron (NM_001039374, intron 1 of 13) LTR5B|LTR|ERVK 898 NM_001039374 84960 Hs.728796 NM_032874 ENSG00000213213 CCDC183 KIAA1984|PARF|bA216L13.7 coiled-coil domain containing 183 protein-coding chr17-2516 chr17 3475952 3476162 + 16.3 0.000 promoter-TSS (NM_000049) promoter-TSS (NM_000049) 60 NM_000049 443 Hs.171142 NM_000049 ENSG00000108381 ASPA ACY2|ASP aspartoacylase protein-coding chr18-290 chr18 57789072 57789282 + 16.3 0.000 intron (NM_005603, intron 1 of 27) MER53|DNA|hAT 14138 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr20-698 chr20 12166185 12166395 + 16.3 0.000 Intergenic LTR33C|LTR|ERVL 248397 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr7-725 chr7 2626878 2627088 + 16.3 0.000 Intergenic Intergenic -5003 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr8-860 chr8 65717466 65717676 + 16.3 0.000 3' UTR (NM_002603, exon 13 of 13) 3' UTR (NM_002603, exon 13 of 13) 47698 NM_001145838 9650 Hs.584788 NM_014637 ENSG00000066855 MTFR1 CHPPR|FAM54A2 mitochondrial fission regulator 1 protein-coding chr4-1208 chr4 110197571 110197781 + 16.3 0.000 intron (NM_001130721, intron 2 of 4) intron (NM_001130721, intron 2 of 4) 939 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr6-636 chr6 74806352 74806562 + 16.3 0.000 Intergenic L2a|LINE|L2 322325 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr1-2662 chr1 181117748 181117958 + 16.3 0.000 Intergenic Intergenic 29153 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr16-1004 chr16 57757391 57757601 + 16.3 0.000 TTS (NM_001318710) TTS (NM_001318710) 14856 NR_106830 102465463 NR_106830 ENSG00000274816 MIR6772 hsa-mir-6772 microRNA 6772 ncRNA chr1-981 chr1 150149846 150150056 + 16.3 0.000 promoter-TSS (NM_001304723) promoter-TSS (NM_001304723) 35 NM_016274 51177 Hs.438824 NM_016274 ENSG00000023902 PLEKHO1 CKIP-1|CKIP1|JBP|OC120 pleckstrin homology domain containing O1 protein-coding chr10-1962 chr10 28217835 28218045 + 16.3 0.000 intron (NR_134517, intron 2 of 16) intron (NR_134517, intron 2 of 16) 64183 NM_173496 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr12-938 chr12 31585369 31585579 + 16.3 0.000 intron (NM_001308339, intron 1 of 22) intron (NM_001308339, intron 1 of 22) -4449 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr1-1937 chr1 19645092 19645302 + 16.3 0.000 promoter-TSS (NM_001204085) promoter-TSS (NM_001204085) -175 NM_001204085 4681 Hs.654502 NM_005380 ENSG00000158747 NBL1 D1S1733E|DAN|DAND1|NB|NO3 NBL1, DAN family BMP antagonist protein-coding chr2-1997 chr2 48344200 48344410 + 16.3 0.000 intron (NM_002158, intron 2 of 6) intron (NM_002158, intron 2 of 6) 29623 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr1-4382 chr1 158496062 158496272 + 16.3 0.000 Intergenic LTR16A|LTR|ERVL 16289 NM_001004472 343406 Hs.451913 NM_001004472 ENSG00000198965 OR10R2 OR1-8|OR10R2Q olfactory receptor family 10 subfamily R member 2 protein-coding chr15-1177 chr15 25372254 25372464 + 16.3 0.000 intron (NM_001354542, intron 4 of 11) intron (NM_001354542, intron 4 of 11) 65870 NM_001354505 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr13-786 chr13 72504586 72504796 + 16.3 0.000 Intergenic Intergenic 222938 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr20-652 chr20 36792580 36792790 + 16.3 0.000 intron (NM_080627, intron 14 of 14) intron (NM_080627, intron 14 of 14) -18922 NM_001145318 79980 Hs.632268 NM_024918 ENSG00000149636 DSN1 C20orf172|KNL3|MIS13|dJ469A13.2|hKNL-3 DSN1 component of MIS12 kinetochore complex protein-coding chr8-540 chr8 118339638 118339848 + 16.3 0.000 TTS (NM_001363274) TTS (NM_001363274) -227924 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr7-1421 chr7 35036573 35036783 + 16.3 0.000 intron (NM_015283, intron 1 of 21) CpG 807 NM_001366673 23333 Hs.408623 NM_015283 ENSG00000173852 DPY19L1 - dpy-19 like C-mannosyltransferase 1 protein-coding chr3-961 chr3 56802000 56802210 + 16.3 0.000 promoter-TSS (NM_019555) promoter-TSS (NM_019555) -156 NM_019555 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr4-975 chr4 76208405 76208615 + 16.3 0.000 intron (NM_001204255, intron 1 of 8) intron (NM_001204255, intron 1 of 8) 5314 NM_001204255 950 Hs.349656 NM_005506 ENSG00000138760 SCARB2 AMRF|CD36L2|EPM4|HLGP85|LGP85|LIMP-2|LIMPII|SR-BII scavenger receptor class B member 2 protein-coding chr22-732 chr22 38415662 38415872 + 16.3 0.000 Intergenic Intergenic -16841 NR_002821 400927 Hs.720223 NR_002821 TPTEP2 Z98749.2 TPTE pseudogene 2 pseudo chr19-1787 chr19 49503318 49503528 + 16.3 0.000 Intergenic Intergenic -2555 NR_029703 406942 NR_029703 ENSG00000207782 MIR150 MIRN150|miRNA150|mir-150 microRNA 150 ncRNA chr15-712 chr15 40873808 40874018 + 16.3 0.000 intron (NM_133639, intron 1 of 2) CpG-8116 321 NM_133639 171177 Hs.447901 NM_133639 ENSG00000104140 RHOV ARHV|CHP|WRCH2 ras homolog family member V protein-coding chr9-2642 chr9 29662988 29663198 + 16.3 0.000 Intergenic MamRep605|LTR?|LTR? -449492 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr9-1174 chr9 82124251 82124461 + 16.3 0.000 Intergenic Charlie15b|DNA|hAT-Charlie 135584 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr6-728 chr6 144008142 144008352 + 16.3 0.000 promoter-TSS (NM_001289049) promoter-TSS (NM_001289049) 12 NM_001317161 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr17-1857 chr17 29760334 29760544 + 16.3 0.000 intron (NM_033389, intron 2 of 14) intron (NM_033389, intron 2 of 14) 993 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr8-1461 chr8 17905190 17905400 + 16.3 0.000 Intergenic Intergenic -9757 NM_201552 2267 Hs.491143 NM_004467 ENSG00000104760 FGL1 HFREP1|HP-041|HPS|LFIRE-1|LFIRE1 fibrinogen like 1 protein-coding chr6-834 chr6 148085695 148085905 + 16.3 0.000 Intergenic Intergenic -186528 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr19-1256 chr19 1007432 1007642 + 16.3 0.000 intron (NM_138690, intron 3 of 8) MER20|DNA|hAT-Charlie 7118 NM_138690 116444 Hs.660378 NM_138690 ENSG00000116032 GRIN3B GluN3B|NR3B glutamate ionotropic receptor NMDA type subunit 3B protein-coding chr16-1858 chr16 75341667 75341877 + 16.3 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) -73765 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr5-3677 chr5 174182194 174182404 + 16.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 136593 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr11-1755 chr11 131546476 131546686 + 16.3 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) -5714 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr7-1836 chr7 132782983 132783193 + 16.3 0.000 Intergenic Intergenic 24118 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr2-2549 chr2 213089512 213089722 + 16.3 0.000 intron (NM_001371277, intron 3 of 6) intron (NM_001371277, intron 3 of 6) 60820 NM_016260 22807 Hs.604950 NM_016260 ENSG00000030419 IKZF2 ANF1A2|HELIOS|ZNF1A2|ZNFN1A2 IKAROS family zinc finger 2 protein-coding chr2-603 chr2 64644530 64644740 + 16.3 0.000 intron (NM_014755, intron 1 of 1) intron (NM_014755, intron 1 of 1) 9278 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr10-643 chr10 3197557 3197767 + 16.3 0.000 Intergenic Intergenic -24821 NM_001242307 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding chr16-808 chr16 31873665 31873875 + 16.3 0.000 promoter-TSS (NM_003414) promoter-TSS (NM_003414) 12 NR_049749 10308 Hs.460645 NM_003414 ENSG00000185947 ZNF267 HZF2 zinc finger protein 267 protein-coding chr3-1829 chr3 61575020 61575230 + 16.3 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 13554 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr17-2211 chr17 81000672 81000882 + 16.3 0.000 TTS (NM_024591) TTS (NM_024591) 8936 NM_024591 79643 Hs.514560 NM_024591 ENSG00000176108 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding chr5-361 chr5 126595105 126595315 + 16.3 0.000 promoter-TSS (NM_001182) promoter-TSS (NM_001182) 9 NM_001202404 501 Hs.483239 NM_001182 ENSG00000164904 ALDH7A1 ATQ1|EPD|PDE aldehyde dehydrogenase 7 family member A1 protein-coding chr18-654 chr18 44772381 44772591 + 16.3 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 91598 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr19-1211 chr19 4575436 4575646 + 16.3 0.000 Intergenic Intergenic -15857 NM_032108 10501 Hs.465642 NM_020241 ENSG00000167680 SEMA6B SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ semaphorin 6B protein-coding chr6-2209 chr6 41496423 41496633 + 16.3 0.000 Intergenic Intergenic -5916 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr12-1477 chr12 9750621 9750831 + 16.3 0.000 Intergenic MIR|SINE|MIR 10175 NM_001781 969 Hs.208854 NM_001781 ENSG00000110848 CD69 AIM|BL-AC/P26|CLEC2C|EA1|GP32/28|MLR-3 CD69 molecule protein-coding chr1-2408 chr1 225635745 225635955 + 16.3 0.000 intron (NM_001008493, intron 1 of 14) MLT1C|LTR|ERVL-MaLR 17273 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr11-761 chr11 59550373 59550583 + 16.3 0.000 Intergenic Intergenic 35565 NM_001004711 390199 Hs.553757 NM_001004711 ENSG00000172742 OR4D9 OR11-253 olfactory receptor family 4 subfamily D member 9 protein-coding chr16-2175 chr16 67990066 67990276 + 16.3 0.000 intron (NM_001369657, intron 6 of 9) intron (NM_001369657, intron 6 of 9) 3223 NM_001369657 64174 Hs.372633 NM_022355 ENSG00000167261 DPEP2 MBD2 dipeptidase 2 protein-coding chr5-2259 chr5 18073149 18073359 + 16.3 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 265980 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr8-1783 chr8 84723396 84723606 + 16.3 0.000 intron (NM_001287244, intron 1 of 7) intron (NM_001287244, intron 1 of 7) 17574 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr5-1557 chr5 83473525 83473735 + 16.3 0.000 intron (NM_001164098, intron 1 of 13) intron (NM_001164098, intron 1 of 13) 1886 NM_004385 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr4-520 chr4 176782935 176783145 + 16.3 0.000 intron (NM_005429, intron 1 of 6) intron (NM_005429, intron 1 of 6) 9882 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr14-1166 chr14 52563244 52563454 + 16.3 0.000 intron (NM_001353361, intron 1 of 7) L2c|LINE|L2 10513 NM_001099652 283554 Hs.416214 NM_001099652 ENSG00000180998 GPR137C TM7SF1L2 G protein-coupled receptor 137C protein-coding chr17-1308 chr17 62597908 62598118 + 16.3 0.000 intron (NM_001284363, intron 15 of 19) intron (NM_001284363, intron 15 of 19) -29657 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr1-1858 chr1 44072291 44072501 + 16.3 0.000 Intergenic L2|LINE|L2 -40934 NM_001024845 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr19-1252 chr19 55549455 55549665 + 16.3 0.000 Intergenic Intergenic -4017 NM_001199824 100130827 Hs.712129 NM_001199824 ENSG00000231274 SBK3 SGK110 SH3 domain binding kinase family member 3 protein-coding chr7-1201 chr7 66570375 66570585 + 16.3 0.000 intron (NR_111978, intron 3 of 4) intron (NR_111978, intron 3 of 4) 21927 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr1-6815 chr1 93779573 93779783 + 16.3 0.000 intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) -4295 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr12-678 chr12 49264487 49264697 + 16.3 0.000 promoter-TSS (NM_032704) promoter-TSS (NM_032704) -490 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr11-1929 chr11 72671823 72672033 + 16.3 0.000 intron (NM_002599, intron 1 of 30) intron (NM_002599, intron 1 of 30) 2494 NM_002599 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr6-510 chr6 33571338 33571548 + 16.3 0.000 Intergenic CpG 8833 NM_001188 578 Hs.485139 NM_001188 ENSG00000030110 BAK1 BAK|BAK-LIKE|BCL2L7|CDN1 BCL2 antagonist/killer 1 protein-coding chr7-3191 chr7 113714518 113714728 + 16.3 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 204386 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr5-1996 chr5 172875917 172876127 + 16.3 0.000 intron (NM_001031711, intron 1 of 9) L1MC5a|LINE|L1 -39061 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr9-1181 chr9 92790916 92791126 + 16.3 0.000 Intergenic MER21-int|LTR|ERVL 17066 NR_136301 101929748 Hs.551296 NR_136301 LOC101929748 - uncharacterized LOC101929748 ncRNA chr2-2541 chr2 201698615 201698825 + 16.3 0.000 promoter-TSS (NM_033066) promoter-TSS (NM_033066) -76 NM_033066 58538 Hs.63085 NM_033066 ENSG00000082126 MPP4 ALS2CR5|DLG6 membrane palmitoylated protein 4 protein-coding chr2-1290 chr2 171297976 171298186 + 16.3 0.000 Intergenic Intergenic -66788 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr1-2148 chr1 9005087 9005297 + 16.3 0.000 intron (NM_207420, intron 10 of 11) intron (NM_207420, intron 10 of 11) 21153 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr8-1244 chr8 124183405 124183615 + 16.3 0.000 Intergenic Intergenic -11988 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr18-460 chr18 25233956 25234166 + 16.3 0.000 intron (NM_001308225, intron 2 of 6) intron (NM_001308225, intron 2 of 6) 118105 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr14-732 chr14 105157087 105157297 + 16.3 0.000 intron (NM_145159, intron 3 of 24) intron (NM_145159, intron 3 of 24) -6328 NR_106823 102465458 NR_106823 ENSG00000273778 MIR6765 hsa-mir-6765 microRNA 6765 ncRNA chr20-390 chr20 3248976 3249186 + 16.3 0.000 TTS (NM_001009984) TTS (NM_001009984) -9891 NR_135000 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr5-901 chr5 15914699 15914909 + 16.3 0.000 intron (NM_001278317, intron 2 of 3) L2c|LINE|L2 -20378 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr20-359 chr20 325405 325615 + 16.3 0.000 promoter-TSS (NM_006943) promoter-TSS (NM_006943) -61 NM_006943 6666 Hs.43627 NM_006943 ENSG00000177732 SOX12 SOX22 SRY-box transcription factor 12 protein-coding chr6-1615 chr6 56292632 56292842 + 16.3 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) -45157 NM_030820 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr9-911 chr9 112753772 112753982 + 16.3 0.000 intron (NM_001012994, intron 1 of 8) intron (NM_001012994, intron 1 of 8) 3117 NM_001012994 401548 Hs.522350 NM_001012994 ENSG00000148158 SNX30 ATG24A sorting nexin family member 30 protein-coding chr15-529 chr15 62742743 62742953 + 16.3 0.000 intron (NM_015059, intron 29 of 55) intron (NM_015059, intron 29 of 55) -81109 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr11-1138 chr11 78169179 78169389 + 16.3 0.000 intron (NR_102281, intron 2 of 2) intron (NR_102281, intron 2 of 2) 19342 NM_001029859 283219 Hs.528439 NM_001029859 ENSG00000188997 KCTD21 KCASH2 potassium channel tetramerization domain containing 21 protein-coding chr11-1522 chr11 117389737 117389947 + 16.3 0.000 intron (NM_001271933, intron 14 of 31) intron (NM_001271933, intron 14 of 31) 61988 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr10-1145 chr10 76086826 76087036 + 16.3 0.000 intron (NM_001305581, intron 5 of 6) UCON89|DNA|hAT? 304170 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr3-2327 chr3 130759937 130760147 + 16.3 0.000 Intergenic L1ME4c|LINE|L1 -13213 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr12-1315 chr12 43310038 43310248 + 16.3 0.000 Intergenic MamGypsy2-I|LTR|Gypsy 154828 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr6-272 chr6 73645679 73645889 + 16.3 0.000 intron (NM_012434, intron 1 of 10) AluY|SINE|Alu 8208 NM_012434 26503 Hs.597422 NM_012434 ENSG00000119899 SLC17A5 AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 member 5 protein-coding chr17-1371 chr17 77948886 77949096 + 16.3 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -55246 NM_018996 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr8-313 chr8 142403295 142403505 + 16.3 0.000 promoter-TSS (NM_001291931) promoter-TSS (NM_001291931) -218 NM_001366902 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr15-576 chr15 99273087 99273297 + 16.3 0.000 intron (NR_135755, intron 2 of 8) intron (NR_135755, intron 2 of 8) 15667 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr11-2033 chr11 65404108 65404318 + 16.3 0.000 intron (NM_001300832, intron 8 of 9) L2a|LINE|L2 17576 NM_031904 83786 Hs.578433 NM_031904 ENSG00000126391 FRMD8 FKSG44|iTAP FERM domain containing 8 protein-coding chr6-740 chr6 5672662 5672872 + 16.3 0.000 intron (NR_110842, intron 2 of 3) intron (NR_110842, intron 2 of 3) 22505 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr19-2717 chr19 32397876 32398086 + 16.3 0.000 intron (NR_046201, intron 2 of 2) intron (NR_046201, intron 2 of 2) 7558 NR_046201 400684 Hs.438766 NR_046201 ENSG00000267213 LOC400684 - uncharacterized LOC400684 ncRNA chr9-1095 chr9 113615001 113615211 + 16.3 0.000 Intergenic Intergenic 20977 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr14-698 chr14 61145462 61145672 + 16.3 0.000 Intergenic Intergenic 135771 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr16-1276 chr16 66886966 66887176 + 16.3 0.000 3' UTR (NM_001329933, exon 3 of 3) 3' UTR (NM_001329933, exon 3 of 3) 6556 NM_001329929 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr22-824 chr22 24471613 24471823 + 16.3 0.000 intron (NR_028483, intron 3 of 7) intron (NR_028483, intron 3 of 7) 23356 NR_028483 646023 Hs.632761 NM_001039784 ENSG00000178803 ADORA2A-AS1 C22orf45 ADORA2A antisense RNA 1 ncRNA chr1-2063 chr1 15152808 15153018 + 16.3 0.000 promoter-TSS (NR_027136) promoter-TSS (NR_027136) 347 NM_001136216 55092 Hs.465305 NM_018022 ENSG00000171729 TMEM51 C1orf72 transmembrane protein 51 protein-coding chr7-1078 chr7 77426662 77426872 + 16.3 0.000 Intergenic Intergenic -10418 NM_001350897 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr3-2252 chr3 49858504 49858714 + 16.3 0.000 3' UTR (NM_001320147, exon 12 of 12) 3' UTR (NM_001320147, exon 12 of 12) -2045 NM_005879 10293 Hs.517972 NM_005879 ENSG00000183763 TRAIP RNF206|SCKL9|TRIP TRAF interacting protein protein-coding chr1-1766 chr1 10338152 10338362 + 16.3 0.000 intron (NM_001365951, intron 31 of 48) intron (NM_001365951, intron 31 of 48) 39291 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr7-1053 chr7 130904296 130904506 + 16.3 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) 8909 NR_110473 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr10-572 chr10 86649229 86649439 + 16.3 0.000 Intergenic Intergenic -5213 NM_033282 94233 Hs.283922 NM_033282 ENSG00000122375 OPN4 MOP opsin 4 protein-coding chr1-4548 chr1 62614039 62614249 + 16.3 0.000 intron (NM_001367561, intron 14 of 49) intron (NM_001367561, intron 14 of 49) 16624 NM_014495 27329 Hs.209153 NM_014495 ENSG00000132855 ANGPTL3 ANG-5|ANGPT5|ANL3|FHBL2 angiopoietin like 3 protein-coding chr5-2017 chr5 38853966 38854176 + 16.3 0.000 intron (NM_003999, intron 1 of 17) intron (NM_003999, intron 1 of 17) 8059 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chrX-500 chrX 66639126 66639336 + 16.3 0.000 promoter-TSS (NM_001324204) promoter-TSS (NM_001324204) 38 NM_001324201 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr17-2532 chr17 28867390 28867600 + 16.3 0.000 Intergenic AluJo|SINE|Alu -5765 NR_039885 100616385 NR_039885 ENSG00000284085 MIR4732 mir-4732 microRNA 4732 ncRNA chr3-2272 chr3 61571770 61571980 + 16.3 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 10304 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr8-452 chr8 61721648 61721858 + 16.3 0.000 Intergenic Intergenic 6965 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chrX-168 chrX 154490780 154490990 + 16.3 0.000 promoter-TSS (NM_001142392) promoter-TSS (NM_001142392) -256 NM_001142391 8273 Hs.522826 NM_019848 ENSG00000126903 SLC10A3 DXS253E|P3 solute carrier family 10 member 3 protein-coding chr16-899 chr16 11628133 11628343 + 16.3 0.000 Intergenic Intergenic -40217 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr3-815 chr3 71258298 71258508 + 16.3 0.000 intron (NR_146142, intron 5 of 19) intron (NR_146142, intron 5 of 19) -13326 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr22-627 chr22 37677234 37677444 + 16.3 0.000 intron (NM_002305, intron 2 of 3) CpG 1703 NM_002305 3956 Hs.445351 NM_002305 ENSG00000100097 LGALS1 GAL1|GBP galectin 1 protein-coding chr3-1230 chr3 112561163 112561373 + 16.3 0.000 promoter-TSS (NM_001348905) promoter-TSS (NM_001348905) -52 NM_001348906 55032 Hs.237480 NM_017945 ENSG00000138459 SLC35A5 - solute carrier family 35 member A5 protein-coding chr2-1827 chr2 127546145 127546355 + 16.3 0.000 intron (NM_001080527, intron 1 of 46) MIRb|SINE|MIR 10448 NM_001080527 4648 Hs.154578 NM_183371 ENSG00000169994 MYO7B - myosin VIIB protein-coding chr11-2318 chr11 66443722 66443932 + 16.3 0.000 Intergenic LTR71A|LTR|ERV1 -4979 NM_016050 65003 Hs.418450 NM_016050 ENSG00000174547 MRPL11 CGI-113|L11MT|MRP-L11 mitochondrial ribosomal protein L11 protein-coding chr11-2104 chr11 119470566 119470776 + 16.3 0.000 intron (NR_034160, intron 3 of 3) intron (NR_034160, intron 3 of 3) -45686 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr7-435 chr7 45768809 45769019 + 16.3 0.000 non-coding (NR_024271, exon 1 of 13) non-coding (NR_024271, exon 1 of 13) 104 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr1-3954 chr1 112638134 112638344 + 16.3 0.000 intron (NM_006135, intron 1 of 9) L2a|LINE|L2 18407 NM_006135 829 Hs.744974 NM_006135 ENSG00000116489 CAPZA1 CAPPA1|CAPZ|CAZ1 capping actin protein of muscle Z-line subunit alpha 1 protein-coding chr16-1548 chr16 72783810 72784020 + 16.3 0.000 3' UTR (NM_006885, exon 10 of 10) 3' UTR (NM_006885, exon 10 of 10) -118945 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr7-1114 chr7 116671820 116672030 + 16.3 0.000 promoter-TSS (NM_001324401) promoter-TSS (NM_001324401) -271 NM_000245 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr17-1177 chr17 44906074 44906284 + 16.3 0.000 TTS (NM_001258399) TTS (NM_001258399) 2349 NM_001258400 100528020 NM_001258400 ENSG00000214447 FAM187A - family with sequence similarity 187 member A protein-coding chr18-1314 chr18 73689068 73689278 + 16.3 0.000 Intergenic Intergenic 364232 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr2-1760 chr2 120737052 120737262 + 16.3 0.000 intron (NM_001371271, intron 1 of 13) CpG 1289 NM_001371271 chr12-698 chr12 32399349 32399559 + 16.3 0.000 promoter-TSS (NM_001370298) promoter-TSS (NM_001370298) -104 NM_001370298 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr11-2477 chr11 64434389 64434599 + 16.3 0.000 Intergenic Intergenic -14563 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr1-1642 chr1 202600325 202600535 + 16.3 0.000 exon (NM_177402, exon 7 of 9) exon (NM_177402, exon 7 of 9) 43023 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding GL000225.1-11 GL000225.1 6154 6364 + 16.3 0.000 NA NA NA NA chr17-1270 chr17 62791243 62791453 + 16.3 0.000 intron (NM_001288780, intron 3 of 10) intron (NM_001288780, intron 3 of 10) 15292 NM_001100875 162333 Hs.665663 NM_152598 ENSG00000173838 MARCH10 MARCH-X|RNF190 membrane associated ring-CH-type finger 10 protein-coding chr10-2184 chr10 6838593 6838803 + 16.3 0.000 intron (NR_038291, intron 4 of 4) intron (NR_038291, intron 4 of 4) 59100 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr10-903 chr10 132789193 132789403 + 16.3 0.000 Intergenic Intergenic -3151 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr12-949 chr12 57836876 57837086 + 16.3 0.000 intron (NM_005730, intron 1 of 7) intron (NM_005730, intron 1 of 7) 9748 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr14-1544 chr14 64569144 64569354 + 16.3 0.000 intron (NM_172365, intron 7 of 11) intron (NM_172365, intron 7 of 11) 19288 NM_172365 145376 Hs.144696 NM_172365 ENSG00000165807 PPP1R36 C14orf50 protein phosphatase 1 regulatory subunit 36 protein-coding chr1-2718 chr1 246567363 246567573 + 16.3 0.000 intron (NM_001139459, intron 1 of 8) intron (NM_001139459, intron 1 of 8) 1012 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding chr22-602 chr22 38270639 38270849 + 16.3 0.000 intron (NM_001195072, intron 1 of 9) intron (NM_001195072, intron 1 of 9) 1920 NM_001195071 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr9-2183 chr9 132222038 132222248 + 16.3 0.000 intron (NM_032536, intron 3 of 7) MER103C|DNA|hAT-Charlie 60085 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr17-1754 chr17 13030647 13030857 + 16.3 0.000 Intergenic Intergenic -12688 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr9-1148 chr9 684077 684287 + 16.3 0.000 intron (NM_001354333, intron 2 of 11) intron (NM_001354333, intron 2 of 11) -2585 NM_001354335 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr22-959 chr22 46479959 46480169 + 16.3 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 57556 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr9-1223 chr9 129570763 129570973 + 16.3 0.000 Intergenic Intergenic -38016 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr12-1890 chr12 63889416 63889626 + 16.3 0.000 intron (NM_001346201, intron 1 of 21) intron (NM_001346201, intron 1 of 21) 44821 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr9-1705 chr9 99752783 99752993 + 16.3 0.000 intron (NR_109802, intron 2 of 6) L1ME2z|LINE|L1 67001 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr7-718 chr7 131328046 131328256 + 16.3 0.000 promoter-TSS (NR_125364) promoter-TSS (NR_125364) 275 NM_001321316 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr12-1206 chr12 121812455 121812665 + 16.3 0.000 intron (NM_001353345, intron 5 of 15) intron (NM_001353345, intron 5 of 15) 7836 NM_001353345 23067 Hs.507122 NM_015048 ENSG00000139718 SETD1B KMT2G|Set1B SET domain containing 1B, histone lysine methyltransferase protein-coding chr17-803 chr17 78343028 78343238 + 16.3 0.000 Intergenic Intergenic 16946 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr9-1297 chr9 96612253 96612463 + 16.3 0.000 intron (NR_147239, intron 1 of 14) intron (NR_147239, intron 1 of 14) 7485 NR_147239 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr5-2104 chr5 38948619 38948829 + 16.3 0.000 intron (NM_001285440, intron 31 of 37) Tigger15a|DNA|TcMar-Tigger 102712 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr2-4169 chr2 182482816 182483026 + 16.3 0.000 intron (NM_005019, intron 1 of 14) L1MB7|LINE|L1 39605 NM_005019 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr2-1015 chr2 264881 265091 + 16.3 0.000 promoter-TSS (NR_104224) promoter-TSS (NR_104224) 39 NM_004300 52 Hs.558296 NM_004300 ENSG00000143727 ACP1 HAAP|LMW-PTP|LMWPTP acid phosphatase 1 protein-coding chr16-447 chr16 57486344 57486554 + 16.3 0.000 promoter-TSS (NM_018110) promoter-TSS (NM_018110) 44 NM_018110 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr15-911 chr15 57667335 57667545 + 16.3 0.000 intron (NR_104369, intron 11 of 12) intron (NR_104369, intron 11 of 12) -39081 NM_001018102 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr6-1331 chr6 26313188 26313398 + 16.3 0.000 Intergenic Intergenic -27794 NM_003543 8365 Hs.591790 NM_003543 ENSG00000158406 HIST1H4H H4/h|H4FH histone cluster 1 H4 family member h protein-coding chr8-636 chr8 42155865 42156075 + 16.3 0.000 intron (NM_006803, intron 2 of 8) intron (NM_006803, intron 2 of 8) 2907 NM_006803 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr1-6027 chr1 63873750 63873960 + 16.3 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 99838 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr1-1717 chr1 27152829 27153039 + 16.3 0.000 intron (NM_003047, intron 1 of 11) intron (NM_003047, intron 1 of 11) 2191 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr4-1632 chr4 81410471 81410681 + 16.3 0.000 Intergenic LTR16A2|LTR|ERVL 61331 NM_001300736 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr1-3629 chr1 47431662 47431872 + 16.3 0.000 TTS (NR_026878) TTS (NR_026878) 2874 NR_026878 84793 Hs.127762 NM_032707 ENSG00000237424 FOXD2-AS1 - FOXD2 adjacent opposite strand RNA 1 ncRNA chr10-958 chr10 48523412 48523622 + 16.3 0.000 intron (NR_144642, intron 3 of 9) CpG -11928 NR_146782 100689073 Hs.667964 NR_146782 ARHGAP22-IT1 - ARHGAP22 intronic transcript 1 ncRNA chr5-710 chr5 78747664 78747874 + 16.3 0.000 Intergenic Intergenic -98997 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr2-2496 chr2 152560298 152560508 + 16.3 0.000 intron (NM_052905, intron 5 of 25) intron (NM_052905, intron 5 of 25) 157058 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr14-595 chr14 95220872 95221082 + 16.3 0.000 intron (NM_024734, intron 4 of 12) MLT1N2|LTR|ERVL-MaLR -62967 NM_001291628 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr2-1911 chr2 171416080 171416290 + 16.3 0.000 intron (NM_001321157, intron 1 of 10) intron (NM_001321157, intron 1 of 10) 17805 NM_001321154 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr3-1303 chr3 171306733 171306943 + 16.3 0.000 intron (NM_001161563, intron 2 of 31) intron (NM_001161563, intron 2 of 31) 153567 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr3-1207 chr3 43872428 43872638 + 16.3 0.000 Intergenic LTR85c|LTR|Gypsy? -180939 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr17-1143 chr17 78117306 78117516 + 16.3 0.000 intron (NM_001321185, intron 17 of 19) intron (NM_001321185, intron 17 of 19) -5612 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr17-1564 chr17 19238155 19238365 + 16.3 0.000 intron (NM_001102664, intron 1 of 7) CpG 883 NM_148921 22905 Hs.743983 NM_014964 ENSG00000072134 EPN2 EHB21 epsin 2 protein-coding chr18-522 chr18 59140444 59140654 + 16.3 0.000 intron (NM_001307941, intron 1 of 4) intron (NM_001307941, intron 1 of 4) 665 NM_033280 90701 Hs.45107 NM_033280 ENSG00000166562 SEC11C SEC11L3|SPC21|SPCS4C SEC11 homolog C, signal peptidase complex subunit protein-coding chr4-1951 chr4 120866071 120866281 + 16.3 0.000 intron (NM_001300824, intron 2 of 13) intron (NM_001300824, intron 2 of 13) 56690 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr3-1111 chr3 71065068 71065278 + 16.3 0.000 promoter-TSS (NM_001244813) promoter-TSS (NM_001244813) -249 NM_001349344 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr7-2207 chr7 106835805 106836015 + 16.3 0.000 Intergenic HERVH-int|LTR|ERV1 -29372 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr19-1982 chr19 3658598 3658808 + 16.3 0.000 intron (NM_001195733, intron 5 of 16) intron (NM_001195733, intron 5 of 16) -31888 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr13-1015 chr13 32538834 32539044 + 16.3 0.000 promoter-TSS (NM_001278432) promoter-TSS (NM_001278432) -54 NM_001278432 10443 Hs.507680 NM_014887 ENSG00000244754 N4BP2L2 92M18.3|CG005|CG016|PFAAP5 NEDD4 binding protein 2 like 2 protein-coding chr13-232 chr13 106567146 106567356 + 16.3 0.000 intron (NM_018011, intron 1 of 3) intron (NM_018011, intron 1 of 3) 886 NM_018011 55082 Hs.508644 NM_018011 ENSG00000134884 ARGLU1 - arginine and glutamate rich 1 protein-coding chr20-398 chr20 47561379 47561589 + 16.3 0.000 intron (NM_181659, intron 1 of 22) AluJr|SINE|Alu 59597 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr8-1491 chr8 42256752 42256962 + 16.3 0.000 intron (NR_125823, intron 2 of 2) MER31-int|LTR|ERV1 14104 NR_125823 101929897 Hs.60288 NR_125823 ENSG00000253408 LOC101929897 - uncharacterized LOC101929897 ncRNA chr20-1243 chr20 35757726 35757936 + 16.3 0.000 Intergenic Intergenic -14184 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding chr7-1126 chr7 5379319 5379529 + 16.3 0.000 intron (NM_001080495, intron 5 of 29) AluJb|SINE|Alu 44122 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr2-4923 chr2 159126753 159126963 + 16.3 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -59977 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr3-1172 chr3 146422574 146422784 + 16.3 0.000 Intergenic Intergenic 46622 NM_001199978 57047 Hs.744414 NM_020359 ENSG00000163746 PLSCR2 - phospholipid scramblase 2 protein-coding chrX-1356 chrX 145883729 145883939 + 16.3 0.000 Intergenic LTR33|LTR|ERVL 62486 NM_001144006 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr15-450 chr15 85619202 85619412 + 16.3 0.000 promoter-TSS (NM_001270546) promoter-TSS (NM_001270546) -643 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr5-1382 chr5 107487299 107487509 + 16.3 0.000 intron (NM_001962, intron 1 of 4) L2c|LINE|L2 183533 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr15-411 chr15 43921904 43922114 + 16.3 0.000 intron (NM_001322951, intron 1 of 14) intron (NM_001322951, intron 1 of 14) -43838 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr18-451 chr18 57743670 57743880 + 16.3 0.000 intron (NM_005603, intron 1 of 27) intron (NM_005603, intron 1 of 27) 59540 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr19-1644 chr19 11640178 11640388 + 16.3 0.000 Intergenic Intergenic 26806 NR_002944 664709 Hs.534822 NR_002944 HNRNPA1P10 HNRPA1L-2 heterogeneous nuclear ribonucleoprotein A1 pseudogene 10 pseudo chr4-537 chr4 39976449 39976659 + 16.3 0.000 exon (NM_001100400, exon 2 of 16) exon (NM_001100400, exon 2 of 16) 1357 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr3-1371 chr3 47789163 47789373 + 16.3 0.000 Intergenic Intergenic -7375 NM_003074 6599 Hs.476179 NM_003074 ENSG00000173473 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding chr6-1513 chr6 3405796 3406006 + 16.3 0.000 intron (NM_021945, intron 4 of 10) intron (NM_021945, intron 4 of 10) 39112 NM_021945 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr17-1966 chr17 15457570 15457780 + 16.3 0.000 intron (NM_001204477, intron 1 of 3) intron (NM_001204477, intron 1 of 3) 9946 NM_001204477 284040 Hs.164595 NM_173622 ENSG00000239704 CDRT4 - CMT1A duplicated region transcript 4 protein-coding chr10-916 chr10 97759409 97759619 + 16.3 0.000 3' UTR (NM_001002262, exon 12 of 12) 3' UTR (NM_001002262, exon 12 of 12) 12485 NM_003015 6425 Hs.279565 NM_003015 ENSG00000120057 SFRP5 SARP3 secreted frizzled related protein 5 protein-coding chr14-776 chr14 42215141 42215351 + 16.3 0.000 Intergenic Intergenic 608390 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr16-602 chr16 49857148 49857358 + 16.3 0.000 intron (NM_001271620, intron 1 of 7) CpG 666 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr19-2709 chr19 23070724 23070934 + 16.3 0.000 Intergenic Intergenic -9564 NR_110745 101929144 Hs.531631 NR_110745 ENSG00000261615 LINC01858 - long intergenic non-protein coding RNA 1858 ncRNA chr4-2093 chr4 40350118 40350328 + 16.3 0.000 intron (NM_017581, intron 4 of 4) intron (NM_017581, intron 4 of 4) 14890 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chr11-2459 chr11 46560218 46560428 + 16.3 0.000 intron (NM_001267782, intron 1 of 19) intron (NM_001267782, intron 1 of 19) 27121 NR_160027 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr2-1270 chr2 61635869 61636079 + 16.3 0.000 Intergenic HERV16-int|LTR|ERVL -97618 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr14-1141 chr14 21486729 21486939 + 16.3 0.000 intron (NM_014828, intron 2 of 8) intron (NM_014828, intron 2 of 8) 9639 NM_001303523 9878 Hs.555910 NM_014828 ENSG00000092203 TOX4 C14orf92|KIAA0737|LCP1|MIG7 TOX high mobility group box family member 4 protein-coding chr5-229 chr5 65722011 65722221 + 16.3 0.000 promoter-TSS (NM_019072) promoter-TSS (NM_019072) -7 NM_019072 54557 Hs.482301 NM_019072 ENSG00000197860 SGTB SGT2 small glutamine rich tetratricopeptide repeat containing beta protein-coding chr1-1694 chr1 218658947 218659157 + 16.3 0.000 intron (NR_031644, intron 3 of 6) intron (NR_031644, intron 3 of 6) 148957 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr7-2136 chr7 38841121 38841331 + 16.3 0.000 intron (NM_014396, intron 4 of 28) intron (NM_014396, intron 4 of 28) 67965 NM_014396 27072 Hs.592184 NM_014396 ENSG00000006715 VPS41 HVPS41|HVSP41|hVps41p VPS41 subunit of HOPS complex protein-coding chr3-2710 chr3 71225135 71225345 + 16.3 0.000 intron (NR_146142, intron 5 of 19) intron (NR_146142, intron 5 of 19) 19837 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr22-745 chr22 18068386 18068596 + 16.3 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -9429 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr9-1369 chr9 16069979 16070189 + 16.3 0.000 Intergenic Intergenic 183023 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr20-667 chr20 8414863 8415073 + 16.3 0.000 intron (NM_182734, intron 3 of 32) MER5A1|DNA|hAT-Charlie 166264 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr5-1358 chr5 35198790 35199000 + 16.3 0.000 intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) 31592 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr21-377 chr21 26801673 26801883 + 16.3 0.000 Intergenic Intergenic 43631 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding chr2-1869 chr2 28633916 28634126 + 16.3 0.000 intron (NR_138141, intron 34 of 35) intron (NR_138141, intron 34 of 35) 67664 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr12-2498 chr12 79566760 79566970 + 16.3 0.000 Intergenic Intergenic 123715 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr1-4782 chr1 15940692 15940902 + 16.3 0.000 TTS (NM_015001) TTS (NM_015001) 35335 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr1-4392 chr1 178109151 178109361 + 16.3 0.000 intron (NM_170692, intron 1 of 17) Charlie13a|DNA|hAT-Charlie 15152 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr10-833 chr10 113297471 113297681 + 16.3 0.000 Intergenic Intergenic 168305 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr2-2653 chr2 187319857 187320067 + 16.3 0.000 Intergenic Intergenic 128290 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr1-2727 chr1 8712289 8712499 + 16.3 0.000 intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 105246 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr6-2333 chr6 117778535 117778745 + 16.3 0.000 Intergenic MIRb|SINE|MIR 103171 NM_138459 116150 Hs.289008 NM_138459 ENSG00000153989 NUS1 C6orf68|CDG1AA|MGC:7199|MRD55|NgBR|TANGO14 NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding chr17-1246 chr17 20226898 20227108 + 16.3 0.000 intron (NM_001033553, intron 4 of 14) intron (NM_001033553, intron 4 of 14) 70931 NM_001033554 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr11-1179 chr11 66327169 66327379 + 16.3 0.000 Intergenic Intergenic 9160 NM_001363560 9610 Hs.1030 NM_004292 ENSG00000174791 RIN1 - Ras and Rab interactor 1 protein-coding chr19-1523 chr19 4495532 4495742 + 16.3 0.000 intron (NM_001001520, intron 9 of 15) L2a|LINE|L2 21683 NM_001348169 84717 Hs.43071 NM_032631 ENSG00000167674 HDGFL2 HDGF-2|HDGF2|HDGFRP2|HRP-2|HRP2 HDGF like 2 protein-coding chr3-2008 chr3 16350275 16350485 + 16.3 0.000 3' UTR (NM_001352982, exon 11 of 11) 3' UTR (NM_001352982, exon 11 of 11) 85168 NR_148220 92106 Hs.655449 NM_138381 ENSG00000154814 OXNAD1 - oxidoreductase NAD binding domain containing 1 protein-coding chr1-1463 chr1 27959891 27960101 + 16.3 0.000 TTS (NM_014474) TTS (NM_014474) 534 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr19-845 chr19 45645556 45645766 + 16.3 0.000 promoter-TSS (NM_001193268) promoter-TSS (NM_001193268) -32 NM_001193268 24139 Hs.24178 NM_012155 ENSG00000125746 EML2 ELP70|EMAP-2|EMAP2 EMAP like 2 protein-coding chr4-2110 chr4 56040286 56040496 + 16.3 0.000 Intergenic HERVL40-int|LTR|ERVL 91446 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr13-422 chr13 25047118 25047328 + 16.3 0.000 Intergenic CpG -48915 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr17-1723 chr17 71251576 71251786 + 16.3 0.000 Intergenic Intergenic -49502 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr3-2576 chr3 115341254 115341464 + 16.3 0.000 Intergenic Intergenic -194071 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr21-49 chr21 41167986 41168196 + 16.3 0.000 promoter-TSS (NM_012105) promoter-TSS (NM_012105) -69 NM_138991 25825 Hs.43047 NM_012105 ENSG00000182240 BACE2 AEPLC|ALP56|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-secretase 2 protein-coding chr1-2375 chr1 85611898 85612108 + 16.3 0.000 Intergenic Intergenic 31242 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr22-495 chr22 30206888 30207098 + 16.3 0.000 Intergenic Intergenic -32201 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr3-971 chr3 115658924 115659134 + 16.3 0.000 intron (NM_002045, intron 1 of 2) intron (NM_002045, intron 1 of 2) 35519 NM_001130064 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr7-2333 chr7 139745848 139746058 + 16.3 0.000 intron (NM_001113239, intron 1 of 14) intron (NM_001113239, intron 1 of 14) 32045 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr1-2004 chr1 43558412 43558622 + 16.3 0.000 intron (NM_001329137, intron 6 of 34) intron (NM_001329137, intron 6 of 34) 27634 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr5-1705 chr5 113215750 113215960 + 16.3 0.000 intron (NM_001085377, intron 3 of 18) intron (NM_001085377, intron 3 of 18) 79083 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr12-1427 chr12 57280294 57280504 + 16.3 0.000 exon (NM_001351209, exon 14 of 24) exon (NM_001351209, exon 14 of 24) -29212 NM_001286257 246329 Hs.417595 NM_145064 ENSG00000185482 STAC3 MYPBB|NAM SH3 and cysteine rich domain 3 protein-coding chr7-527 chr7 101126876 101127086 + 16.3 0.000 promoter-TSS (NM_000602) promoter-TSS (NM_000602) -108 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr1-3017 chr1 240232528 240232738 + 16.3 0.000 intron (NM_020066, intron 6 of 17) intron (NM_020066, intron 6 of 17) 140750 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr15-540 chr15 96345678 96345888 + 16.3 0.000 Intergenic CpG 12018 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr8-1167 chr8 25230105 25230315 + 16.3 0.000 intron (NM_024940, intron 1 of 51) MIRc|SINE|MIR 45521 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr1-1926 chr1 6868935 6869145 + 16.3 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 83586 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr19-1737 chr19 1088820 1089030 + 16.3 0.000 intron (NM_001316323, intron 6 of 6) intron (NM_001316323, intron 6 of 6) 6450 NM_002695 5434 Hs.24301 NM_002695 ENSG00000099817 POLR2E RPABC1|RPB5|XAP4|hRPB25|hsRPB5 RNA polymerase II subunit E protein-coding chrX-382 chrX 48465396 48465606 + 16.3 0.000 intron (NM_033518, intron 8 of 16) intron (NM_033518, intron 8 of 16) 4759 NM_033518 92745 Hs.195155 NM_033518 ENSG00000017483 SLC38A5 JM24|SN2|SNAT5|pp7194 solute carrier family 38 member 5 protein-coding chr4-446 chr4 83455613 83455823 + 16.3 0.000 promoter-TSS (NM_016067) promoter-TSS (NM_016067) 105 NM_133636 113510 Hs.480101 NM_133636 ENSG00000163312 HELQ HEL308 helicase, POLQ like protein-coding chr3-3143 chr3 160696071 160696281 + 16.3 0.000 Intergenic Intergenic 19016 NM_025047 80117 Hs.287702 NM_025047 ENSG00000179674 ARL14 ARF7 ADP ribosylation factor like GTPase 14 protein-coding chr2-1417 chr2 150046327 150046537 + 16.3 0.000 Intergenic MIR|SINE|MIR -187241 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr11-1293 chr11 130531192 130531402 + 16.3 0.000 Intergenic Intergenic 82323 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr20-1145 chr20 46148710 46148920 + 16.3 0.000 Intergenic Intergenic 30501 NM_001362758 958 Hs.472860 NM_001250 ENSG00000101017 CD40 Bp50|CDW40|TNFRSF5|p50 CD40 molecule protein-coding chr5-1832 chr5 102856442 102856652 + 16.3 0.000 intron (NM_001364582, intron 1 of 24) intron (NM_001364582, intron 1 of 24) -9276 NM_001177306 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr5-2028 chr5 61051711 61051921 + 16.3 0.000 intron (NM_174889, intron 1 of 3) L4_A_Mam|LINE|RTE-X 106611 NM_174889 91942 Hs.591757 NM_174889 ENSG00000164182 NDUFAF2 B17.2L|MC1DN10|MMTN|NDUFA12L|mimitin NADH:ubiquinone oxidoreductase complex assembly factor 2 protein-coding chr1-3923 chr1 86543081 86543291 + 16.3 0.000 Intergenic Intergenic -3892 NM_012128 22802 Hs.567422 NM_012128 ENSG00000016602 CLCA4 CaCC|CaCC2 chloride channel accessory 4 protein-coding chr5-1408 chr5 151115641 151115851 + 16.3 0.000 intron (NM_001193544, intron 19 of 24) Tigger16a|DNA|TcMar-Tigger 25938 NM_001193544 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr10-1091 chr10 44952817 44953027 + 16.3 0.000 intron (NR_033842, intron 1 of 7) intron (NR_033842, intron 1 of 7) 6767 NR_033842 220980 Hs.568801 NR_033842 ENSG00000224812 TMEM72-AS1 - TMEM72 antisense RNA 1 ncRNA chr14-937 chr14 28652760 28652970 + 16.3 0.000 Intergenic Charlie7|DNA|hAT-Charlie 112454 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr6-1318 chr6 12381676 12381886 + 16.3 0.000 Intergenic Intergenic 91420 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr1-1794 chr1 88731619 88731829 + 16.3 0.000 intron (NM_001320708, intron 1 of 20) intron (NM_001320708, intron 1 of 20) -46520 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr14-1130 chr14 103541575 103541785 + 16.3 0.000 Intergenic Intergenic 12484 NM_152307 115708 Hs.525610 NM_152307 ENSG00000166166 TRMT61A C14orf172|GCD14|Gcd14p|TRM61|hTRM61 tRNA methyltransferase 61A protein-coding chr1-2058 chr1 9443928 9444138 + 16.3 0.000 Intergenic Intergenic -15037 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr11-2969 chr11 79754583 79754793 + 16.3 0.000 Intergenic FLAM_A|SINE|Alu -313658 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr14-875 chr14 88022307 88022517 + 16.3 0.000 intron (NR_110121, intron 2 of 2) intron (NR_110121, intron 2 of 2) -2138 NR_046094 283587 Hs.525513 NR_046094 ENSG00000258867 LINC01146 - long intergenic non-protein coding RNA 1146 ncRNA chr20-845 chr20 36277588 36277798 + 16.3 0.000 Intergenic Intergenic -28646 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr14-459 chr14 55448131 55448341 + 16.3 0.000 Intergenic Intergenic -7691 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr17-809 chr17 3890141 3890351 + 16.3 0.000 intron (NM_032294, intron 1 of 15) intron (NM_032294, intron 1 of 15) 497 NM_172206 84254 Hs.8417 NM_032294 ENSG00000004660 CAMKK1 CAMKKA calcium/calmodulin dependent protein kinase kinase 1 protein-coding chr3-1119 chr3 149575658 149575868 + 16.3 0.000 intron (NM_001348362, intron 5 of 9) intron (NM_001348362, intron 5 of 9) 82262 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr1-1790 chr1 63893082 63893292 + 16.3 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 119170 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr8-1122 chr8 111226948 111227158 + 16.3 0.000 intron (NR_125418, intron 1 of 3) intron (NR_125418, intron 1 of 3) 9150 NR_125418 101927487 Hs.630004 NR_125418 ENSG00000253103 LINC01609 - long intergenic non-protein coding RNA 1609 ncRNA chr11-2499 chr11 67203008 67203218 + 16.1 0.000 intron (NR_027473, intron 5 of 20) Tigger1|DNA|TcMar-Tigger -36901 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr12-1312 chr12 23921657 23921867 + 16.1 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) 27908 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr8-1779 chr8 79793677 79793887 + 16.1 0.000 intron (NR_125410, intron 3 of 3) Tigger7|DNA|TcMar-Tigger 25640 NR_125410 101927067 Hs.144030 NR_125410 ENSG00000272138 LINC01607 - long intergenic non-protein coding RNA 1607 ncRNA chr3-1974 chr3 124832982 124833192 + 16.1 0.000 intron (NM_001354766, intron 5 of 13) intron (NM_001354766, intron 5 of 13) 54278 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr5-1471 chr5 78638622 78638832 + 16.1 0.000 intron (NM_005779, intron 1 of 4) intron (NM_005779, intron 1 of 4) 10045 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr2-2126 chr2 51812320 51812530 + 16.1 0.000 intron (NR_135237, intron 6 of 10) intron (NR_135237, intron 6 of 10) -558223 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr8-858 chr8 25248362 25248572 + 16.1 0.000 intron (NM_024940, intron 2 of 51) intron (NM_024940, intron 2 of 51) 63778 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr17-1503 chr17 39704664 39704874 + 16.1 0.000 intron (NR_110535, intron 1 of 26) intron (NR_110535, intron 1 of 26) 4791 NM_004448 2064 Hs.446352 NM_004448 ENSG00000141736 ERBB2 CD340|HER-2|HER-2/neu|HER2|MLN 19|NEU|NGL|TKR1 erb-b2 receptor tyrosine kinase 2 protein-coding chr22-739 chr22 45865285 45865495 + 16.1 0.000 Intergenic Intergenic 104866 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr22-876 chr22 41482764 41482974 + 16.1 0.000 intron (NM_001098, intron 1 of 17) MIRb|SINE|MIR 13752 NM_001098 50 Hs.643610 NM_001098 ENSG00000100412 ACO2 ACONM|HEL-S-284|ICRD|OCA8|OPA9 aconitase 2 protein-coding chr3-3110 chr3 144677141 144677351 + 16.1 0.000 Intergenic MLT1H-int|LTR|ERVL-MaLR 704165 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr5-738 chr5 159749120 159749330 + 16.1 0.000 Intergenic Intergenic 122159 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr15-750 chr15 60379605 60379815 + 16.1 0.000 intron (NM_001002857, intron 4 of 13) MIRb|SINE|MIR 18276 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chrX-284 chrX 40094062 40094272 + 16.1 0.000 intron (NM_001123384, intron 1 of 13) intron (NM_001123384, intron 1 of 13) 3299 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr22-1064 chr22 19728705 19728915 + 16.1 0.000 Intergenic Intergenic 5267 NM_000407 2812 Hs.283743 NM_000407 ENSG00000203618 GP1BB BDPLT1|BS|CD42C|GPIBB|GPIbbeta glycoprotein Ib platelet subunit beta protein-coding chr13-765 chr13 110617804 110618014 + 16.1 0.000 intron (NM_018210, intron 1 of 9) intron (NM_018210, intron 1 of 9) 2325 NM_001242881 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chrX-498 chrX 51899799 51900009 + 16.1 0.000 intron (NM_006986, intron 10 of 12) intron (NM_006986, intron 10 of 12) 6281 NM_006986 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr22-1109 chr22 37863454 37863664 + 16.1 0.000 intron (NM_001363785, intron 6 of 11) intron (NM_001363785, intron 6 of 11) 14140 NM_016091 51386 Hs.446852 NM_016091 ENSG00000100129 EIF3L EIF3EIP|EIF3S11|EIF3S6IP|HSPC021|HSPC025|MSTP005 eukaryotic translation initiation factor 3 subunit L protein-coding chr22-349 chr22 25405296 25405506 + 16.1 0.000 Intergenic CpG -23824 NM_001135772 91355 Hs.634058 NM_182492 ENSG00000100068 LRP5L - LDL receptor related protein 5 like protein-coding chr22-496 chr22 30312167 30312377 + 16.1 0.000 intron (NM_001204240, intron 1 of 8) intron (NM_001204240, intron 1 of 8) 14669 NM_031937 83874 Hs.655273 NM_031937 ENSG00000099992 TBC1D10A EPI64|TBC1D10|dJ130H16.1|dJ130H16.2 TBC1 domain family member 10A protein-coding chr2-1764 chr2 135701700 135701910 + 16.1 0.000 intron (NM_001282798, intron 20 of 25) MER44D|DNA|TcMar-Tigger 36408 NR_029672 406915 NR_029672 ENSG00000207654 MIR128-1 MIR128A|MIRN128-1|MIRN128A|mir-128-1 microRNA 128-1 ncRNA chr17-1763 chr17 21162116 21162326 + 16.1 0.000 intron (NM_015510, intron 1 of 6) intron (NM_015510, intron 1 of 6) -3966 NM_001330159 25979 Hs.386989 NM_015510 ENSG00000109016 DHRS7B CGI-93|SDR32C1 dehydrogenase/reductase 7B protein-coding chr18-398 chr18 8896113 8896323 + 16.1 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 178837 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr14-1179 chr14 58898654 58898864 + 16.1 0.000 intron (NR_110547, intron 2 of 5) MIR|SINE|MIR 70471 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr4-483 chr4 84666602 84666812 + 16.1 0.000 Intergenic L1MA3|LINE|L1 83580 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr3-1659 chr3 167813614 167813824 + 16.1 0.000 intron (NM_001122752, intron 6 of 8) L2c|LINE|L2 77996 NM_005025 5274 Hs.478153 NM_005025 ENSG00000163536 SERPINI1 PI12|neuroserpin serpin family I member 1 protein-coding chr19-2002 chr19 17751610 17751820 + 16.1 0.000 intron (NM_001161359, intron 1 of 26) intron (NM_001161359, intron 1 of 26) 238 NM_001161359 23149 Hs.96485 NM_015122 ENSG00000130475 FCHO1 - FCH domain only 1 protein-coding chr11-2014 chr11 61769654 61769864 + 16.1 0.000 intron (NM_013279, intron 4 of 25) intron (NM_013279, intron 4 of 25) -12095 NR_026882 26070 Hs.564254 NR_026882 ENSG00000124915 MYRF-AS1 DKFZP434K028 MYRF antisense RNA 1 ncRNA chr22-401 chr22 43007734 43007944 + 16.1 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 7310 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr15-1993 chr15 42347483 42347693 + 16.1 0.000 intron (NM_198141, intron 20 of 23) intron (NM_198141, intron 20 of 23) -11912 NM_024344 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr7-2792 chr7 79988665 79988875 + 16.1 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -146061 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr3-3174 chr3 179866040 179866250 + 16.1 0.000 intron (NR_146167, intron 6 of 13) intron (NR_146167, intron 6 of 13) -32049 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr3-1675 chr3 195482138 195482348 + 16.1 0.000 Intergenic Intergenic -39223 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr17-1841 chr17 15563693 15563903 + 16.1 0.000 promoter-TSS (NR_037924) promoter-TSS (NR_037924) -167 NM_001135036 201158 Hs.164595 NM_145301 ENSG00000175106 TVP23C FAM18B2 trans-golgi network vesicle protein 23 homolog C protein-coding chr1-2944 chr1 62398536 62398746 + 16.1 0.000 Intergenic Intergenic -37663 NM_001017416 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr8-569 chr8 98157900 98158110 + 16.1 0.000 exon (NM_001145861, exon 16 of 16) exon (NM_001145861, exon 16 of 16) 40165 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr10-1060 chr10 102758988 102759198 + 16.1 0.000 intron (NM_001083913, intron 1 of 3) LTR13A|LTR|ERVK 15145 NM_001083913 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr1-955 chr1 77979260 77979470 + 16.1 0.000 promoter-TSS (NR_146539) promoter-TSS (NR_146539) -160 NM_001303433 8880 Hs.567380 NM_003902 ENSG00000162613 FUBP1 FBP|FUBP|hDH V far upstream element binding protein 1 protein-coding chr8-768 chr8 22641236 22641446 + 16.1 0.000 non-coding (NR_027715, exon 1 of 1) non-coding (NR_027715, exon 1 of 1) 868 NR_027715 80094 Hs.675917 NM_025026 BIN3-IT1 - BIN3 intronic transcript 1 ncRNA chr22-771 chr22 39020698 39020908 + 16.1 0.000 promoter-TSS (NM_152426) promoter-TSS (NM_152426) -324 NM_152426 140564 Hs.629775 NM_152426 ENSG00000243811 APOBEC3D A3D|APOBEC3DE|APOBEC3E|ARP6 apolipoprotein B mRNA editing enzyme catalytic subunit 3D protein-coding chr19-2189 chr19 17311979 17312189 + 16.1 0.000 intron (NM_024050, intron 1 of 4) MIRb|SINE|MIR 2521 NM_024050 79016 Hs.466154 NM_024050 ENSG00000130311 DDA1 C19orf58|PCIA1 DET1 and DDB1 associated 1 protein-coding chr1-726 chr1 224330206 224330416 + 16.1 0.000 promoter-TSS (NM_001243146) promoter-TSS (NM_001243146) -122 NM_001243146 4931 Hs.497867 NM_002533 ENSG00000143748 NVL NVL2 nuclear VCP like protein-coding chr2-2010 chr2 72458177 72458387 + 16.1 0.000 intron (NM_001321729, intron 18 of 22) intron (NM_001321729, intron 18 of 22) -310420 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr17-1828 chr17 7558243 7558453 + 16.1 0.000 promoter-TSS (NM_003808) promoter-TSS (NM_003808) 56 NM_001198624 8741 Hs.54673 NM_003808 ENSG00000161955 TNFSF13 APRIL|CD256|TALL-2|TALL2|TNLG7B|TRDL-1|UNQ383/PRO715|ZTNF2 TNF superfamily member 13 protein-coding chr11-2515 chr11 70692846 70693056 + 16.1 0.000 intron (NM_012309, intron 14 of 24) intron (NM_012309, intron 14 of 24) -31110 NR_110766 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr2-3483 chr2 187390873 187391083 + 16.1 0.000 intron (NM_005795, intron 1 of 14) intron (NM_005795, intron 1 of 14) 57274 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr4-846 chr4 25908380 25908590 + 16.1 0.000 Intergenic Intergenic -5707 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr5-1118 chr5 36861933 36862143 + 16.1 0.000 Intergenic L2c|LINE|L2 14656 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA chr5-1186 chr5 60688215 60688425 + 16.1 0.000 intron (NM_001145208, intron 1 of 9) intron (NM_001145208, intron 1 of 9) 11846 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr14-939 chr14 30711032 30711242 + 16.1 0.000 intron (NM_016106, intron 19 of 24) intron (NM_016106, intron 19 of 24) 88818 NM_001257376 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr15-495 chr15 68334758 68334968 + 16.1 0.000 intron (NM_001004439, intron 12 of 29) intron (NM_001004439, intron 12 of 29) 57118 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr10-993 chr10 44180190 44180400 + 16.1 0.000 Intergenic Intergenic -112455 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr15-807 chr15 71093277 71093487 + 16.1 0.000 Intergenic Intergenic -48067 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr6-1647 chr6 138493644 138493854 + 16.1 0.000 intron (NM_020464, intron 2 of 6) X6A_LINE|LINE|CR1 5745 NM_001144060 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr4-2453 chr4 175622913 175623123 + 16.1 0.000 Intergenic Intergenic 164658 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr14-757 chr14 76784885 76785095 + 16.1 0.000 intron (NR_104183, intron 1 of 2) intron (NR_104183, intron 1 of 2) 1734 NR_104184 100506603 Hs.673984 NR_104183 ENSG00000258301 VASH1-AS1 - VASH1 antisense RNA 1 ncRNA chr7-831 chr7 73330254 73330464 + 16.1 0.000 intron (NM_001362789, intron 4 of 7) intron (NM_001362789, intron 4 of 7) 2198 NM_001281304 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr1-2401 chr1 185484130 185484340 + 16.1 0.000 Intergenic Intergenic 144253 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr17-1033 chr17 62653073 62653283 + 16.1 0.000 intron (NM_006039, intron 1 of 29) intron (NM_006039, intron 1 of 29) 25508 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr15-959 chr15 41827333 41827543 + 16.1 0.000 promoter-TSS (NM_001198588) promoter-TSS (NM_001198588) -647 NM_005090 8681 Hs.198161 NM_005090 ENSG00000168970 JMJD7-PLA2G4B HsT16992|cPLA2-beta JMJD7-PLA2G4B readthrough protein-coding chr22-328 chr22 41294938 41295148 + 16.1 0.000 intron (NM_001317930, intron 1 of 15) SVA_D|Retroposon|SVA -6482 NM_017590 23264 Hs.592188 NM_017590 ENSG00000100403 ZC3H7B ROXAN1|RoXaN zinc finger CCCH-type containing 7B protein-coding chr11-1565 chr11 72225672 72225882 + 16.1 0.000 intron (NM_001567, intron 1 of 27) intron (NM_001567, intron 1 of 27) 1010 NM_001567 3636 Hs.523875 NM_001567 ENSG00000165458 INPPL1 OPSMD|SHIP2 inositol polyphosphate phosphatase like 1 protein-coding chr1-7563 chr1 203331574 203331784 + 16.1 0.000 Intergenic MER20|DNA|hAT-Charlie 19443 NR_103757 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr5-1876 chr5 145346930 145347140 + 16.1 0.000 Intergenic Intergenic 488307 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr5-1352 chr5 32234114 32234324 + 16.1 0.000 intron (NM_001040446, intron 14 of 15) MIRb|SINE|MIR -59900 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chrX-416 chrX 11757596 11757806 + 16.1 0.000 promoter-TSS (NM_001193270) promoter-TSS (NM_001193270) -458 NM_078628 10943 Hs.655288 NM_006800 ENSG00000005302 MSL3 MSL3L1 MSL complex subunit 3 protein-coding chr1-1994 chr1 16076793 16077003 + 16.1 0.000 Intergenic Intergenic -3247 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chrX-316 chrX 134520948 134521158 + 16.1 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 19209 NR_030587 100126302 NR_030587 ENSG00000216001 MIR450B MIRN450B|mir-450b microRNA 450b ncRNA chr5-944 chr5 75236999 75237209 + 16.1 0.000 promoter-TSS (NM_001164443) promoter-TSS (NM_001164443) -226 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr7-1670 chr7 105003899 105004109 + 16.1 0.000 Intergenic Intergenic 10137 NR_024586 100216545 Hs.631150 NR_024586 KMT2E-AS1 - KMT2E antisense RNA 1 ncRNA chr6-1403 chr6 130434444 130434654 + 16.1 0.000 intron (NM_001258278, intron 1 of 1) L3|LINE|CR1 -2568 NM_052913 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr18-929 chr18 71727187 71727397 + 16.1 0.000 Intergenic Intergenic 54934 NR_126324 102724913 NR_126324 ENSG00000265352 LINC01899 - long intergenic non-protein coding RNA 1899 ncRNA chr1-1252 chr1 180563061 180563271 + 16.1 0.000 intron (NR_125716, intron 2 of 2) intron (NR_125716, intron 2 of 2) 4192 NR_125716 148756 NR_125716 ENSG00000236719 OVAAL LINC01131|OVAL ovarian adenocarcinoma amplified long non-coding RNA ncRNA chr18-260 chr18 63178255 63178465 + 16.1 0.000 intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 141020 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr9-1309 chr9 127979303 127979513 + 16.1 0.000 intron (NM_001035254, intron 1 of 10) intron (NM_001035254, intron 1 of 10) 1581 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr2-1335 chr2 120818524 120818734 + 16.1 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 26348 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr8-816 chr8 140615037 140615247 + 16.1 0.000 intron (NM_001164623, intron 1 of 17) AluJb|SINE|Alu 20491 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr4-674 chr4 103076506 103076716 + 16.1 0.000 TTS (NM_020139) TTS (NM_020139) 150 NM_001370203 133308 Hs.546482 NM_178833 ENSG00000164038 SLC9B2 NHA2|NHE10|NHEDC2 solute carrier family 9 member B2 protein-coding chr18-626 chr18 11258102 11258312 + 16.1 0.000 Intergenic Intergenic -109445 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr3-1702 chr3 42180457 42180667 + 16.1 0.000 intron (NM_001349247, intron 3 of 16) AluJr|SINE|Alu 20369 NM_014965 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr15-979 chr15 59296388 59296598 + 16.1 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 76378 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr5-1847 chr5 117594160 117594370 + 16.1 0.000 Intergenic Intergenic -136096 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr1-2296 chr1 25711687 25711897 + 16.1 0.000 intron (NM_020379, intron 2 of 11) intron (NM_020379, intron 2 of 11) -88401 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr15-249 chr15 90102562 90102772 + 16.1 0.000 promoter-TSS (NM_001290114) promoter-TSS (NM_001290114) -113 NM_002168 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr22-765 chr22 36587717 36587927 + 16.1 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) -58656 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr7-581 chr7 101018252 101018462 + 16.1 0.000 promoter-TSS (NR_120519) promoter-TSS (NR_120519) -749 NR_120520 102724094 Hs.571256 NR_120519 ENSG00000227053 LOC102724094 - uncharacterized LOC102724094 ncRNA chr19-1414 chr19 46898818 46899028 + 16.1 0.000 intron (NM_004491, intron 1 of 6) LTR33A|LTR|ERVL 37926 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr19-1562 chr19 1883733 1883943 + 16.1 0.000 intron (NM_031213, intron 1 of 5) L2|LINE|L2 1658 NM_031213 81926 Hs.465542 NM_031213 ENSG00000129968 ABHD17A C19orf27|FAM108A1 abhydrolase domain containing 17A protein-coding chr1-3533 chr1 206866305 206866515 + 16.1 0.000 intron (NM_018724, intron 2 of 4) intron (NM_018724, intron 2 of 4) 601 NM_018724 50604 Hs.272373 NM_018724 ENSG00000162891 IL20 IL-20|IL10D|ZCYTO10 interleukin 20 protein-coding chr15-403 chr15 70559186 70559396 + 16.1 0.000 Intergenic Intergenic 27315 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA chr1-2301 chr1 27663137 27663347 + 16.1 0.000 promoter-TSS (NR_151722) promoter-TSS (NR_151722) -520 NR_151722 111216282 Hs.297628 NR_151722 ENSG00000233975 LINC02574 - long intergenic non-protein coding RNA 2574 ncRNA chr2-1882 chr2 71498450 71498660 + 16.1 0.000 intron (NM_001130985, intron 3 of 54) LTR8|LTR|ERV1 31856 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr10-2677 chr10 99369737 99369947 + 16.1 0.000 intron (NM_001345889, intron 7 of 10) intron (NM_001345889, intron 7 of 10) 40486 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr1-1820 chr1 223846140 223846350 + 16.1 0.000 promoter-TSS (NM_001031685) promoter-TSS (NM_001031685) -273 NM_005426 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr7-1105 chr7 55062964 55063174 + 16.1 0.000 intron (NM_001346941, intron 1 of 21) MIRb|SINE|MIR 44037 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr4-942 chr4 121690891 121691101 + 16.1 0.000 intron (NM_001154, intron 2 of 12) intron (NM_001154, intron 2 of 12) 5984 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr17-1338 chr17 39016668 39016878 + 16.1 0.000 Intergenic MER21A|LTR|ERVL 10337 NR_135645 105371766 Hs.311469 NR_135645 ENSG00000266013 LINC02079 - long intergenic non-protein coding RNA 2079 ncRNA chr14-543 chr14 68918752 68918962 + 16.1 0.000 intron (NM_001102, intron 3 of 20) MIRb|SINE|MIR 60445 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr9-1651 chr9 137630171 137630381 + 16.1 0.000 intron (NM_001354612, intron 1 of 8) intron (NM_001354612, intron 1 of 8) 11271 NM_001354611 79813 Hs.495511 NM_024757 ENSG00000181090 EHMT1 EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D euchromatic histone lysine methyltransferase 1 protein-coding chr2-2595 chr2 241309758 241309968 + 16.1 0.000 intron (NM_005336, intron 1 of 27) HAL1|LINE|L1 -5324 NM_001349315 4735 Hs.721234 NM_004404 ENSG00000168385 SEPTIN2 DIFF6|NEDD-5|NEDD5|Pnutl3|SEPT2|hNedd5 septin 2 protein-coding chr15-870 chr15 57612112 57612322 + 16.1 0.000 intron (NM_001018100, intron 2 of 12) intron (NM_001018100, intron 2 of 12) 20313 NR_104371 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr2-887 chr2 63189078 63189288 + 16.1 0.000 intron (NR_148705, intron 13 of 16) intron (NR_148705, intron 13 of 16) -69641 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr12-1403 chr12 508819 509029 + 16.1 0.000 intron (NM_173593, intron 1 of 19) intron (NM_173593, intron 1 of 19) 48985 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr11-2516 chr11 71901112 71901322 + 16.1 0.000 intron (NR_029192, intron 6 of 6) intron (NR_029192, intron 6 of 6) 22764 NM_001242853 100129216 Hs.740246 NM_001242853 ENSG00000225805 DEFB131B - defensin beta 131B protein-coding chr19-1588 chr19 10811117 10811327 + 16.1 0.000 intron (NM_001005360, intron 14 of 20) intron (NM_001005360, intron 14 of 20) 6274 NR_029586 406976 NR_029586 ENSG00000207752 MIR199A1 MIR-199-s|MIRN199A1|mir-199a-1 microRNA 199a-1 ncRNA chr21-542 chr21 42091966 42092176 + 16.1 0.000 intron (NM_001004416, intron 6 of 22) L2|LINE|L2 16463 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr1-2602 chr1 63773929 63774139 + 16.1 0.000 promoter-TSS (NM_001083592) promoter-TSS (NM_001083592) 17 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr1-2147 chr1 8540702 8540912 + 16.1 0.000 intron (NM_001042681, intron 7 of 22) intron (NM_001042681, intron 7 of 22) -45894 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr9-345 chr9 3525933 3526143 + 16.1 0.000 promoter-TSS (NM_001282116) promoter-TSS (NM_001282116) -37 NM_134428 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr6-1597 chr6 37324118 37324328 + 16.1 0.000 intron (NR_130108, intron 12 of 12) intron (NR_130108, intron 12 of 12) -29760 NM_003958 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr2-4037 chr2 109163851 109164061 + 16.1 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -22368 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr19-652 chr19 49157610 49157820 + 16.1 0.000 promoter-TSS (NM_001195227) promoter-TSS (NM_001195227) -77 NM_001321282 54795 Hs.467101 NM_017636 ENSG00000130529 TRPM4 LTrpC4|PFHB1B|TRPM4B|hTRPM4 transient receptor potential cation channel subfamily M member 4 protein-coding chr1-1693 chr1 205591919 205592129 + 16.1 0.000 intron (NM_181644, intron 6 of 9) CpG -22719 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr1-3261 chr1 208239204 208239414 + 16.1 0.000 intron (NM_025179, intron 1 of 31) intron (NM_025179, intron 1 of 31) 5075 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr4-658 chr4 2860962 2861172 + 16.1 0.000 intron (NM_001354757, intron 2 of 16) L2a|LINE|L2 16917 NM_001286645 118 Hs.183706 NM_001119 ENSG00000087274 ADD1 ADDA adducin 1 protein-coding chr8-1457 chr8 6599316 6599526 + 16.1 0.000 intron (NM_024596, intron 12 of 13) intron (NM_024596, intron 12 of 13) 22799 NR_107022 102465861 NR_107022 ENSG00000276580 MIR8055 hsa-mir-8055 microRNA 8055 ncRNA chr2-2445 chr2 67260882 67261092 + 16.1 0.000 intron (NR_110564, intron 1 of 4) intron (NR_110564, intron 1 of 4) -45668 NR_038844 644838 Hs.145561 NR_038844 ENSG00000236780 LINC01829 - long intergenic non-protein coding RNA 1829 ncRNA chr16-1084 chr16 66552561 66552771 + 16.1 0.000 promoter-TSS (NM_001204099) promoter-TSS (NM_001204099) 90 NM_001204098 100529251 Hs.698621 NM_001202509 ENSG00000254788 CKLF-CMTM1 - CKLF-CMTM1 readthrough protein-coding chrX-164 chrX 76172850 76173060 + 16.1 0.000 promoter-TSS (NM_001300888) promoter-TSS (NM_001300888) 26 NM_001300888 51260 Hs.370100 NM_016500 ENSG00000102390 PBDC1 CXorf26 polysaccharide biosynthesis domain containing 1 protein-coding chr10-989 chr10 132207152 132207362 + 16.1 0.000 TTS (NR_134911) TTS (NR_134911) 20309 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr11-1370 chr11 74749302 74749512 + 16.1 0.000 intron (NM_001098638, intron 1 of 5) CpG 558 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr11-495 chr11 63938592 63938802 + 16.1 0.000 promoter-TSS (NM_001300800) promoter-TSS (NM_001300800) -305 NM_024771 79829 Hs.523753 NM_024771 ENSG00000110583 NAA40 NAT11|NatD|PATT1|hNatD N(alpha)-acetyltransferase 40, NatD catalytic subunit protein-coding chr10-1320 chr10 78802909 78803119 + 16.1 0.000 Intergenic Intergenic 264434 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr17-1657 chr17 65240663 65240873 + 16.1 0.000 Intergenic Intergenic 103398 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr14-779 chr14 51638297 51638507 + 16.1 0.000 intron (NM_001042481, intron 2 of 14) intron (NM_001042481, intron 2 of 14) 13342 NR_037676 145438 Hs.645410 NR_037676 ENSG00000273888 FRMD6-AS1 C14orf82 FRMD6 antisense RNA 1 ncRNA chr20-1012 chr20 4666020 4666230 + 16.1 0.000 Intergenic LTR8|LTR|ERV1 -20331 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr9-1386 chr9 85228410 85228620 + 16.1 0.000 Intergenic Intergenic 513514 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr9-635 chr9 127930908 127931118 + 16.1 0.000 promoter-TSS (NM_001135219) promoter-TSS (NM_001135219) -236 NM_001135219 138429 Hs.734928 NM_173492 ENSG00000167103 PIP5KL1 PIPKH phosphatidylinositol-4-phosphate 5-kinase like 1 protein-coding chr8-1901 chr8 27400021 27400231 + 16.1 0.000 intron (NM_173175, intron 2 of 29) intron (NM_173175, intron 2 of 29) -33244 NR_106901 102465507 NR_106901 ENSG00000273836 MIR6842 hsa-mir-6842 microRNA 6842 ncRNA chr5-2140 chr5 84032391 84032601 + 16.1 0.000 intron (NM_001278642, intron 8 of 9) intron (NM_001278642, intron 8 of 9) -311641 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr6-1582 chr6 22471120 22471330 + 16.1 0.000 Intergenic Intergenic -98341 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr17-1402 chr17 54967783 54967993 + 16.1 0.000 promoter-TSS (NM_178509) promoter-TSS (NM_178509) 766 NR_135677 1353 Hs.591171 NM_004375 ENSG00000166260 COX11 COX11P cytochrome c oxidase copper chaperone COX11 protein-coding chr8-521 chr8 143266460 143266670 + 16.1 0.000 promoter-TSS (NM_138465) promoter-TSS (NM_138465) -880 NM_138465 2738 Hs.400533 NM_138465 ENSG00000250571 GLI4 HKR4|ZNF928 GLI family zinc finger 4 protein-coding chr12-858 chr12 6925731 6925941 + 16.1 0.000 intron (NM_001007026, intron 1 of 9) intron (NM_001007026, intron 1 of 9) 1377 NM_001007026 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr9-732 chr9 128656821 128657031 + 16.1 0.000 promoter-TSS (NM_052844) promoter-TSS (NM_052844) -76 NM_052844 89891 Hs.495240 NM_052844 ENSG00000119333 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding chr13-396 chr13 60583475 60583685 + 16.1 0.000 Intergenic MER90|LTR|ERV1 -89375 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr18-346 chr18 62584360 62584570 + 16.1 0.000 non-coding (NR_126534, exon 15 of 15) non-coding (NR_126534, exon 15 of 15) 61440 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr6-722 chr6 125301596 125301806 + 16.1 0.000 intron (NM_016063, intron 1 of 5) CpG 266 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chr3-333 chr3 51983004 51983214 + 16.1 0.000 promoter-TSS (NM_001198895) promoter-TSS (NM_001198895) -426 NM_001198896 95 Hs.334707 NM_000666 ENSG00000243989 ACY1 ACY-1|ACY1D|HEL-S-5 aminoacylase 1 protein-coding chr20-531 chr20 41232440 41232650 + 16.1 0.000 intron (NM_015035, intron 2 of 3) MamGypsy2-LTR|LTR|Gypsy 63522 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr11-1086 chr11 122505685 122505895 + 16.1 0.000 Intergenic Intergenic -82919 NR_137179 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr17-877 chr17 14069250 14069460 + 16.1 0.000 promoter-TSS (NM_001303) promoter-TSS (NM_001303) 103 NR_049718 100874058 Hs.720411 NR_049718 ENSG00000236088 COX10-AS1 COX10-AS|COX10AS COX10 antisense RNA 1 ncRNA chr3-1845 chr3 86923049 86923259 + 16.1 0.000 Intergenic Intergenic 67995 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr1-741 chr1 45206373 45206583 + 16.1 0.000 5' UTR (NM_020883, exon 1 of 14) 5' UTR (NM_020883, exon 1 of 14) 127 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr7-2497 chr7 20065399 20065609 + 16.1 0.000 intron (NR_110114, intron 1 of 5) intron (NR_110114, intron 1 of 5) 74922 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr11-2464 chr11 59786894 59787104 + 16.1 0.000 intron (NM_001178040, intron 2 of 9) intron (NM_001178040, intron 2 of 9) 23779 NM_017840 54948 Hs.530734 NM_017840 ENSG00000166902 MRPL16 L16mt|MRP-L16|PNAS-111 mitochondrial ribosomal protein L16 protein-coding chr7-2579 chr7 128909847 128910057 + 16.1 0.000 intron (NM_001366122, intron 1 of 39) intron (NM_001366122, intron 1 of 39) 757 NM_199349 375616 Hs.371746 NM_199349 ENSG00000135253 KCP CRIM2|KCP1|NET67 kielin cysteine rich BMP regulator protein-coding chr19-2180 chr19 14614540 14614750 + 16.1 0.000 Intergenic AluSz6|SINE|Alu -7568 NR_132784 106635534 NR_132784 SNORA104 - small nucleolar RNA, H/ACA box 104 snoRNA chr6-1762 chr6 69918078 69918288 + 16.1 0.000 intron (NM_001858, intron 4 of 50) L2a|LINE|L2 51627 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr3-1357 chr3 194485788 194485998 + 16.1 0.000 intron (NM_001367549, intron 1 of 33) intron (NM_001367549, intron 1 of 33) 1109 NM_001367549 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr5-1080 chr5 33601970 33602180 + 16.1 0.000 intron (NM_001324512, intron 14 of 21) intron (NM_001324512, intron 14 of 21) 161299 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr5-1031 chr5 143243923 143244133 + 16.1 0.000 Intergenic Intergenic 51528 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr8-1060 chr8 38631963 38632173 + 16.1 0.000 Intergenic Intergenic -30811 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr4-544 chr4 109046811 109047021 + 16.1 0.000 intron (NM_198721, intron 4 of 36) intron (NM_198721, intron 4 of 36) 255742 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr11-2964 chr11 77244704 77244914 + 16.1 0.000 intron (NM_182833, intron 12 of 16) intron (NM_182833, intron 12 of 16) 56857 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr12-929 chr12 115570526 115570736 + 16.1 0.000 Intergenic Intergenic 578023 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr9-1588 chr9 95055363 95055573 + 16.1 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -9882 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr1-2504 chr1 201912997 201913207 + 16.1 0.000 intron (NM_012134, intron 1 of 2) intron (NM_012134, intron 1 of 2) 24425 NM_198149 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr2-1372 chr2 11345067 11345277 + 16.1 0.000 promoter-TSS (NM_004850) promoter-TSS (NM_004850) 265 NM_001321643 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr7-1089 chr7 139680831 139681041 + 16.1 0.000 intron (NM_001113239, intron 2 of 14) intron (NM_001113239, intron 2 of 14) 97062 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr7-1054 chr7 134976516 134976726 + 16.1 0.000 Intergenic L1PA5|LINE|L1 -9887 NM_001345853 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr4-1684 chr4 152938392 152938602 + 16.1 0.000 intron (NM_001371116, intron 1 of 11) intron (NM_001371116, intron 1 of 11) -1660 NR_136614 729870 Hs.310357 NR_136614 LOC729870 - uncharacterized LOC729870 ncRNA chr14-1006 chr14 104715857 104716067 + 16.1 0.000 intron (NM_022489, intron 22 of 22) intron (NM_022489, intron 22 of 22) -8235 NM_152328 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr9-1681 chr9 83669121 83669331 + 16.1 0.000 exon (NM_053067, exon 7 of 10) exon (NM_053067, exon 7 of 10) -38609 NR_135839 105376114 Hs.9589 NR_135839 ENSG00000254473 LOC105376114 - uncharacterized LOC105376114 ncRNA chr2-1424 chr2 190627948 190628158 + 16.1 0.000 Intergenic Intergenic -20842 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr21-258 chr21 36927797 36928007 + 16.1 0.000 intron (NM_001352515, intron 5 of 10) intron (NM_001352515, intron 5 of 10) 34456 NM_001352518 3141 Hs.371350 NM_000411 ENSG00000159267 HLCS HCS holocarboxylase synthetase protein-coding chr13-399 chr13 80133022 80133232 + 16.1 0.000 Intergenic Intergenic 122050 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr3-633 chr3 52831910 52832120 + 16.1 0.000 Intergenic Intergenic -1314 NM_001166449 3700 Hs.709406 NM_002218 ENSG00000055955 ITIH4 GP120|H4P|IHRP|ITI-HC4|ITIHL1|PK-120|PK120 inter-alpha-trypsin inhibitor heavy chain 4 protein-coding chr9-3593 chr9 81146746 81146956 + 16.1 0.000 Intergenic L2c|LINE|L2 542684 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr7-1726 chr7 7967928 7968138 + 16.1 0.000 promoter-TSS (NM_138426) promoter-TSS (NM_138426) 719 NR_110018 100505921 Hs.634989 NR_110018 LOC100505921 - uncharacterized LOC100505921 ncRNA chr2-2278 chr2 27524273 27524483 + 16.1 0.000 TTS (NM_001486) TTS (NM_001486) 27539 NM_001486 2646 Hs.89771 NM_001486 ENSG00000084734 GCKR FGQTL5|GKRP glucokinase regulator protein-coding chr6-836 chr6 148272200 148272410 + 16.1 0.000 promoter-TSS (NM_001346505) promoter-TSS (NM_001346505) -23 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr16-1899 chr16 87966309 87966519 + 16.1 0.000 intron (NM_001173542, intron 1 of 12) intron (NM_001173542, intron 1 of 12) -3604 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr3-1574 chr3 53577569 53577779 + 16.1 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 83063 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr8-558 chr8 56890056 56890266 + 16.1 0.000 Intergenic Intergenic 103706 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr12-1048 chr12 93752358 93752568 + 16.1 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -14640 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr10-1211 chr10 14126797 14127007 + 16.1 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 52618 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr11-1030 chr11 126062771 126062981 + 16.1 0.000 intron (NM_016952, intron 1 of 19) CpG 416 NM_001243597 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr7-1328 chr7 1595700 1595910 + 16.1 0.000 Intergenic Intergenic -18665 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr4-1954 chr4 128123136 128123346 + 16.1 0.000 TTS (NM_178043) TTS (NM_178043) 61929 NR_146772 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr4-1537 chr4 151690733 151690943 + 16.1 0.000 intron (NM_001363341, intron 9 of 11) intron (NM_001363341, intron 9 of 11) 70169 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr6-1117 chr6 133503459 133503669 + 16.1 0.000 intron (NR_109982, intron 8 of 8) intron (NR_109982, intron 8 of 8) 262065 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr20-755 chr20 32820467 32820677 + 16.1 0.000 intron (NM_012325, intron 1 of 6) intron (NM_012325, intron 1 of 6) 618 NM_012325 22919 Hs.472437 NM_012325 ENSG00000101367 MAPRE1 EB1 microtubule associated protein RP/EB family member 1 protein-coding chr13-389 chr13 33679476 33679686 + 16.1 0.000 Intergenic Intergenic -2787 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr17-1589 chr17 54932871 54933081 + 16.1 0.000 intron (NM_001321173, intron 8 of 9) intron (NM_001321173, intron 8 of 9) 32124 NM_005486 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr4-965 chr4 38673296 38673506 + 16.1 0.000 intron (NM_016531, intron 1 of 5) intron (NM_016531, intron 1 of 5) -8773 NR_026804 79667 Hs.29725 NM_024614 ENSG00000231160 KLF3-AS1 - KLF3 antisense RNA 1 ncRNA chr4-1009 chr4 2653881 2654091 + 16.1 0.000 intron (NM_001256668, intron 5 of 19) MLT1C|LTR|ERVL-MaLR 28554 NM_003704 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr11-1731 chr11 103946912 103947122 + 16.1 0.000 intron (NM_025208, intron 4 of 6) intron (NM_025208, intron 4 of 6) -89623 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr19-1529 chr19 11166589 11166799 + 16.1 0.000 intron (NM_001136191, intron 12 of 12) intron (NM_001136191, intron 12 of 12) -10882 NM_001317031 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr7-290 chr7 140177005 140177215 + 16.1 0.000 promoter-TSS (NR_024451) promoter-TSS (NR_024451) -127 NM_030647 80853 Hs.308710 NM_030647 ENSG00000006459 KDM7A JHDM1D lysine demethylase 7A protein-coding chr19-1979 chr19 2603459 2603669 + 16.1 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -27151 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr6-1950 chr6 126033773 126033983 + 16.1 0.000 intron (NM_001031712, intron 12 of 12) intron (NM_001031712, intron 12 of 12) 47338 NR_146804 60487 Hs.404186 NM_021820 ENSG00000066651 TRMT11 C6orf75|MDS024|TRM11|TRMT11-1 tRNA methyltransferase 11 homolog protein-coding chr5-1520 chr5 151267606 151267816 + 16.1 0.000 3' UTR (NM_000405, exon 4 of 4) 3' UTR (NM_000405, exon 4 of 4) 14526 NM_001167607 2760 Hs.483873 NM_000405 ENSG00000196743 GM2A GM2-AP|SAP-3 GM2 ganglioside activator protein-coding chr9-1185 chr9 98035765 98035975 + 16.1 0.000 Intergenic Intergenic -20862 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr2-3801 chr2 19955919 19956129 + 16.1 0.000 intron (NM_001006657, intron 12 of 27) intron (NM_001006657, intron 12 of 27) 34081 NM_001006657 57539 Hs.205427 NM_020779 ENSG00000118965 WDR35 CED2|IFT121|IFTA1|SRTD7 WD repeat domain 35 protein-coding chr10-1754 chr10 15123829 15124039 + 16.1 0.000 intron (NM_001308295, intron 9 of 12) intron (NM_001308295, intron 9 of 12) 26579 NM_006414 10557 Hs.94986 NM_006414 ENSG00000152464 RPP38 - ribonuclease P/MRP subunit p38 protein-coding chr16-545 chr16 25257347 25257557 + 16.1 0.000 5' UTR (NM_001012981, exon 1 of 7) 5' UTR (NM_001012981, exon 1 of 7) 393 NM_001012981 342357 Hs.513451 NM_001012981 ENSG00000155592 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding chrX-261 chrX 15675440 15675650 + 16.1 0.000 promoter-TSS (NR_160542) promoter-TSS (NR_160542) 87 NR_160543 340591 Hs.732244 NR_026551 ENSG00000186312 CA5BP1 CA5BL|CA5BP|PRO2325 carbonic anhydrase 5B pseudogene 1 pseudo chr1-3787 chr1 9573015 9573225 + 16.1 0.000 intron (NM_032315, intron 4 of 6) intron (NM_032315, intron 4 of 6) -15791 NM_001010866 199953 Hs.632365 NM_001010866 ENSG00000188807 TMEM201 Ima1|NET5|SAMP1 transmembrane protein 201 protein-coding chr10-914 chr10 80133298 80133508 + 16.1 0.000 intron (NM_001012973, intron 1 of 3) intron (NM_001012973, intron 1 of 3) 673 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr13-490 chr13 113153819 113154029 + 16.1 0.000 Intergenic CpG -4724 NM_003891 8858 Hs.1011 NM_003891 ENSG00000126231 PROZ PZ protein Z, vitamin K dependent plasma glycoprotein protein-coding chr5-1453 chr5 43389734 43389944 + 16.1 0.000 intron (NM_001301874, intron 1 of 3) intron (NM_001301874, intron 1 of 3) 7298 NM_001301875 56477 Hs.656904 NM_019846 ENSG00000151882 CCL28 CCK1|MEC|SCYA28 C-C motif chemokine ligand 28 protein-coding chr15-980 chr15 61556073 61556283 + 16.1 0.000 Intergenic L2c|LINE|L2 -173740 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr12-1254 chr12 49109153 49109363 + 16.1 0.000 intron (NM_018113, intron 1 of 16) intron (NM_018113, intron 1 of 16) 1642 NM_001300751 55716 Hs.272838 NM_018113 ENSG00000139636 LMBR1L LIMR limb development membrane protein 1 like protein-coding chr3-1646 chr3 124016575 124016785 + 16.1 0.000 Intergenic Intergenic -24510 NR_133917 54763 Hs.567516 NM_017578 ENSG00000065371 ROPN1 CT91|ODF6|RHPNAP1|ROPN1A|ropporin rhophilin associated tail protein 1 protein-coding chr5-995 chr5 65867889 65868099 + 16.1 0.000 Intergenic Intergenic -58560 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr10-2263 chr10 119880696 119880906 + 16.1 0.000 Intergenic AluJr|SINE|Alu -7173 NM_001256379 79892 Hs.124246 NM_024834 ENSG00000197771 MCMBP C10orf119|MCM-BP minichromosome maintenance complex binding protein protein-coding chr10-523 chr10 133261331 133261541 + 16.1 0.000 TTS (NM_001109) TTS (NM_001109) -13551 NR_108078 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG - MIR202 host gene ncRNA chr17-1778 chr17 48791090 48791300 + 16.1 0.000 intron (NM_001130918, intron 9 of 15) intron (NM_001130918, intron 9 of 15) 3129 NM_173623 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr1-1708 chr1 9234814 9235024 + 16.1 0.000 5' UTR (NM_004285, exon 1 of 5) 5' UTR (NM_004285, exon 1 of 5) 145 NM_004285 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr9-1517 chr9 96344547 96344757 + 16.1 0.000 intron (NR_104627, intron 7 of 12) intron (NR_104627, intron 7 of 12) 39058 NR_104627 11046 Hs.494556 NM_007001 ENSG00000130958 SLC35D2 HFRC1|SQV7L|UGTrel8|hfrc solute carrier family 35 member D2 protein-coding chr11-1324 chr11 94604626 94604836 + 16.1 0.000 intron (NM_152431, intron 13 of 19) intron (NM_152431, intron 13 of 19) 37363 NM_152431 143689 Hs.660188 NM_152431 ENSG00000134627 PIWIL4 HIWI2|MIWI2 piwi like RNA-mediated gene silencing 4 protein-coding chr3-1314 chr3 12948036 12948246 + 16.1 0.000 intron (NM_001134382, intron 1 of 13) MIR|SINE|MIR 19589 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr14-362 chr14 104689323 104689533 + 16.1 0.000 promoter-TSS (NM_022489) promoter-TSS (NM_022489) -178 NM_032714 64423 Hs.24956 NM_022489 ENSG00000203485 INF2 C14orf151|C14orf173|CMTDIE|FSGS5|pp9484 inverted formin, FH2 and WH2 domain containing protein-coding chr2-1987 chr2 37699288 37699498 + 16.1 0.000 Intergenic L2c|LINE|L2 -26858 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr9-1210 chr9 124812514 124812724 + 16.1 0.000 3' UTR (NM_001282715, exon 5 of 5) 3' UTR (NM_001282715, exon 5 of 5) 11745 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr1-1019 chr1 201829122 201829332 + 16.1 0.000 promoter-TSS (NM_018085) promoter-TSS (NM_018085) 70 NM_018085 55705 Hs.596014 NM_018085 ENSG00000198700 IPO9 Imp9 importin 9 protein-coding chr6-1537 chr6 56552986 56553196 + 16.1 0.000 exon (NM_015548, exon 42 of 84) exon (NM_015548, exon 42 of 84) 89798 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr1-3947 chr1 101653492 101653702 + 16.1 0.000 Intergenic L1MA4|LINE|L1 193483 NM_001288821 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr1-4394 chr1 179744294 179744504 + 16.1 0.000 intron (NM_001329719, intron 1 of 4) CpG 1108 NM_173509 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding chr4-2307 chr4 71206821 71207031 + 16.1 0.000 intron (NM_001098484, intron 1 of 25) MIR|SINE|MIR 19640 NM_001134742 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr11-1400 chr11 9004088 9004298 + 16.1 0.000 promoter-TSS (NM_020645) promoter-TSS (NM_020645) -192 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chr13-171 chr13 50693895 50694105 + 16.1 0.000 Intergenic Intergenic -113855 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr6-3882 chr6 56642891 56643101 + 16.1 0.000 promoter-TSS (NM_001723) promoter-TSS (NM_001723) -107 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr16-1670 chr16 77789813 77790023 + 16.1 0.000 intron (NM_020927, intron 1 of 8) intron (NM_020927, intron 1 of 8) 1354 NM_020927 57687 Hs.461405 NM_020927 ENSG00000171724 VAT1L - vesicle amine transport 1 like protein-coding chr8-1269 chr8 143421981 143422191 + 16.1 0.000 Intergenic Intergenic 4407 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr10-2064 chr10 99585863 99586073 + 16.1 0.000 Intergenic Intergenic 34471 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding chr6-1816 chr6 141105657 141105867 + 16.1 0.000 Intergenic Intergenic 421948 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr9-1204 chr9 123335695 123335905 + 16.1 0.000 Intergenic Intergenic -20397 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr1-3429 chr1 6585690 6585900 + 16.1 0.000 intron (NM_001278648, intron 3 of 10) intron (NM_001278648, intron 3 of 10) 5801 NM_001278647 3104 Hs.502330 NM_005341 ENSG00000204859 ZBTB48 HKR3|TZAP|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding chr19-2474 chr19 3047758 3047968 + 16.1 0.000 promoter-TSS (NM_001144761) promoter-TSS (NM_001144761) -228 NM_001144761 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr12-953 chr12 84912864 84913074 + 16.1 0.000 promoter-TSS (NM_001146335) promoter-TSS (NM_001146335) -140 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr22-936 chr22 45562237 45562447 + 16.1 0.000 intron (NM_006486, intron 14 of 16) MIRb|SINE|MIR 43305 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr20-776 chr20 48686476 48686686 + 16.1 0.000 intron (NM_020820, intron 10 of 39) intron (NM_020820, intron 10 of 39) 141418 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr11-4124 chr11 39881959 39882169 + 16.1 0.000 Intergenic L1PA3|LINE|L1 411066 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr1-1788 chr1 47533105 47533315 + 16.1 0.000 Intergenic (CTC)n|Simple_repeat|Simple_repeat -95893 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr20-702 chr20 32007566 32007776 + 16.1 0.000 Intergenic Intergenic -2767 NM_080625 140706 Hs.382151 NM_080625 ENSG00000101331 CCM2L C20orf160|dJ310O13.5 CCM2 like scaffold protein protein-coding chr17-1121 chr17 32142061 32142271 + 16.1 0.000 promoter-TSS (NR_110083) promoter-TSS (NR_110083) -288 NM_001288758 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding chr13-699 chr13 35630651 35630861 + 16.1 0.000 intron (NM_001204197, intron 9 of 17) intron (NM_001204197, intron 9 of 17) -66768 NR_132116 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr19-1245 chr19 46471321 46471531 + 16.1 0.000 5' UTR (NM_001103149, exon 1 of 3) 5' UTR (NM_001103149, exon 1 of 3) 137 NM_001103149 55228 Hs.8395 NM_018215 ENSG00000182013 PNMA8A PNMAL1 PNMA family member 8A protein-coding chr10-1018 chr10 69974569 69974779 + 16.1 0.000 Intergenic Intergenic -78172 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr16-1164 chr16 71816641 71816851 + 16.1 0.000 Intergenic Intergenic -7912 NM_001030007 164 Hs.461253 NM_001128 ENSG00000166747 AP1G1 ADTG|CLAPG1 adaptor related protein complex 1 subunit gamma 1 protein-coding chr4-662 chr4 7393187 7393397 + 16.1 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 41638 NM_001085382 768239 Hs.662523 NM_001085382 ENSG00000178597 PSAPL1 - prosaposin like 1 (gene/pseudogene) protein-coding chr5-841 chr5 61275794 61276004 + 16.1 0.000 Intergenic L2b|LINE|L2 -10970 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr10-1163 chr10 5944460 5944670 + 16.1 0.000 Intergenic Intergenic 24363 NM_001351096 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr6-603 chr6 89035833 89036043 + 16.1 0.000 Intergenic Intergenic -44813 NM_006813 10957 Hs.75969 NM_006813 ENSG00000146278 PNRC1 B4-2|PNAS-145|PROL2|PRR2 proline rich nuclear receptor coactivator 1 protein-coding chr4-3119 chr4 168693848 168694058 + 16.1 0.000 intron (NM_001166108, intron 8 of 21) intron (NM_001166108, intron 8 of 21) 62375 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr3-2833 chr3 18098989 18099199 + 16.1 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 136542 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr2-2245 chr2 224922436 224922646 + 16.1 0.000 intron (NM_001290263, intron 2 of 55) intron (NM_001290263, intron 2 of 55) 24508 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr17-1337 chr17 33218836 33219046 + 16.1 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 74047 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr16-1400 chr16 89117449 89117659 + 16.1 0.000 intron (NR_147928, intron 7 of 11) intron (NR_147928, intron 7 of 11) -18994 NR_045667 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr11-1594 chr11 14500374 14500584 + 16.1 0.000 promoter-TSS (NM_001144062) promoter-TSS (NM_001144062) -584 NM_001144061 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr1-2789 chr1 215104376 215104586 + 16.1 0.000 intron (NM_001017424, intron 2 of 6) intron (NM_001017424, intron 2 of 6) 21744 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr17-854 chr17 42311529 42311739 + 16.1 0.000 3' UTR (NM_003152, exon 20 of 20) 3' UTR (NM_003152, exon 20 of 20) 23578 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr15-868 chr15 48803024 48803234 + 16.1 0.000 intron (NM_014985, intron 2 of 25) intron (NM_014985, intron 2 of 25) 7940 NM_001194998 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr11-518 chr11 65780020 65780230 + 16.1 0.000 exon (NM_138368, exon 2 of 2) exon (NM_138368, exon 2 of 2) 851 NM_138368 91056 Hs.591957 NM_138368 ENSG00000254470 AP5B1 AP-5|PP1030 adaptor related protein complex 5 subunit beta 1 protein-coding chr3-2337 chr3 138113461 138113671 + 16.1 0.000 promoter-TSS (NM_001170538) promoter-TSS (NM_001170538) -86 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr22-493 chr22 29877729 29877939 + 16.1 0.000 Intergenic Intergenic -5335 NM_153050 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding chr7-799 chr7 75966811 75967021 + 16.1 0.000 intron (NM_000941, intron 2 of 15) intron (NM_000941, intron 2 of 15) 23133 NR_002955 677801 Hs.689708 NR_002955 ENSG00000201643 SNORA14A ACA14a small nucleolar RNA, H/ACA box 14A snoRNA chr3-1425 chr3 192957638 192957848 + 16.1 0.000 Intergenic Intergenic -39887 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr1-4997 chr1 63209506 63209716 + 16.1 0.000 intron (NR_038252, intron 4 of 11) intron (NR_038252, intron 4 of 11) 107646 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr22-686 chr22 38506454 38506664 + 16.1 0.000 promoter-TSS (NM_001098504) promoter-TSS (NM_001098504) -248 NM_001098504 10521 Hs.528305 NM_006386 ENSG00000100201 DDX17 P72|RH70 DEAD-box helicase 17 protein-coding chr5-1910 chr5 169763515 169763725 + 16.1 0.000 intron (NR_156756, intron 25 of 52) intron (NR_156756, intron 25 of 52) 126345 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr6-2398 chr6 148973934 148974144 + 16.1 0.000 intron (NM_005715, intron 5 of 7) intron (NM_005715, intron 5 of 7) -9355 NR_038408 100128176 Hs.557541 NR_038408 UST-AS1 - UST antisense RNA 1 ncRNA chr7-1711 chr7 1591917 1592127 + 16.1 0.000 Intergenic Intergenic 21949 NR_027328 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr11-1944 chr11 115676912 115677122 + 16.1 0.000 Intergenic Intergenic 57745 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr1-2022 chr1 150509163 150509373 + 16.1 0.000 intron (NM_001202858, intron 1 of 9) intron (NM_001202858, intron 1 of 9) 1159 NM_004425 1893 Hs.81071 NM_004425 ENSG00000143369 ECM1 URBWD extracellular matrix protein 1 protein-coding chr10-3140 chr10 65799561 65799771 + 16.1 0.000 Intergenic L2c|LINE|L2 228241 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr16-1440 chr16 67917378 67917588 + 16.1 0.000 intron (NM_006742, intron 2 of 2) intron (NM_006742, intron 2 of 2) 14379 NM_001907 1506 Hs.654546 NM_001907 ENSG00000141086 CTRL CTRL1 chymotrypsin like protein-coding chr17-788 chr17 2337874 2338084 + 16.1 0.000 promoter-TSS (NM_018128) promoter-TSS (NM_018128) 478 NM_014853 9905 Hs.513861 NM_014853 ENSG00000141258 SGSM2 RUTBC1 small G protein signaling modulator 2 protein-coding chr15-981 chr15 62323247 62323457 + 16.1 0.000 Intergenic LTR33A|LTR|ERVL -18618 NR_107034 102465869 NR_107034 ENSG00000277919 MIR8067 hsa-mir-8067 microRNA 8067 ncRNA chr1-1078 chr1 15741675 15741885 + 16.1 0.000 promoter-TSS (NM_001013641) promoter-TSS (NM_001013641) -719 NM_001013641 388595 Hs.454828 NM_001013641 ENSG00000162460 TMEM82 - transmembrane protein 82 protein-coding chr7-1151 chr7 100119876 100120086 + 16.1 0.000 promoter-TSS (NM_001365001) promoter-TSS (NM_001365001) -123 NM_001190415 6878 Hs.489309 NM_005641 ENSG00000106290 TAF6 ALYUS|MGC:8964|TAF(II)70|TAF(II)80|TAF2E|TAFII-70|TAFII-80|TAFII70|TAFII80|TAFII85 TATA-box binding protein associated factor 6 protein-coding chr22-655 chr22 37990359 37990569 + 16.1 0.000 intron (NM_001301130, intron 5 of 5) intron (NM_001301130, intron 5 of 5) 1670 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr10-549 chr10 71999297 71999507 + 16.1 0.000 intron (NM_004273, intron 1 of 2) intron (NM_004273, intron 1 of 2) 35007 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr13-281 chr13 26051843 26052053 + 16.0 0.000 promoter-TSS (NM_001007538) promoter-TSS (NM_001007538) -888 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr8-2257 chr8 71458675 71458885 + 16.0 0.000 intron (NM_001370336, intron 2 of 17) L2|LINE|L2 88924 NM_172059 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr1-4235 chr1 200975061 200975271 + 16.0 0.000 intron (NM_001252103, intron 32 of 33) intron (NM_001252103, intron 32 of 33) 46222 NR_147176 647215 Hs.576504 NR_147176 ENSG00000233217 MROH3P C1orf81 maestro heat like repeat family member 3, pseudogene pseudo chr15-255 chr15 57376314 57376524 + 16.0 0.000 promoter-TSS (NM_001252335) promoter-TSS (NM_001252335) -86 NM_032866 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr2-2177 chr2 18991190 18991400 + 16.0 0.000 intron (NR_135287, intron 3 of 3) intron (NR_135287, intron 3 of 3) 35676 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr14-447 chr14 63852903 63853113 + 16.0 0.000 promoter-TSS (NM_182914) promoter-TSS (NM_182914) 4 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr9-1059 chr9 87702170 87702380 + 16.0 0.000 intron (NM_004938, intron 24 of 25) intron (NM_004938, intron 24 of 25) -23844 NM_001912 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr3-2379 chr3 175743746 175743956 + 16.0 0.000 intron (NM_207015, intron 12 of 13) L2a|LINE|L2 32482 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr6-2365 chr6 135739434 135739644 + 16.0 0.000 Intergenic MER44B|DNA|TcMar-Tigger -112162 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr12-1215 chr12 132685553 132685763 + 16.0 0.000 intron (NM_006231, intron 1 of 48) (GCAGT)n|Simple_repeat|Simple_repeat 1866 NM_006231 5426 Hs.524871 NM_006231 ENSG00000177084 POLE CRCS12|FILS|IMAGEI|POLE1 DNA polymerase epsilon, catalytic subunit protein-coding chr22-1368 chr22 30495223 30495433 + 16.0 0.000 exon (NM_174977, exon 5 of 12) exon (NM_174977, exon 5 of 12) 10367 NM_174977 284904 Hs.517541 NM_174977 ENSG00000133488 SEC14L4 TAP3 SEC14 like lipid binding 4 protein-coding chr14-1217 chr14 90281351 90281561 + 16.0 0.000 intron (NM_017970, intron 12 of 13) intron (NM_017970, intron 12 of 13) 23517 NM_001330212 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr1-1348 chr1 17540217 17540427 + 16.0 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) 624 NM_018125 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr13-299 chr13 21033359 21033569 + 16.0 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 28122 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr11-2057 chr11 70099353 70099563 + 16.0 0.000 intron (NM_018043, intron 2 of 25) intron (NM_018043, intron 2 of 25) 14048 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr19-1444 chr19 9912027 9912237 + 16.0 0.000 intron (NM_058164, intron 1 of 5) intron (NM_058164, intron 1 of 5) 1669 NM_001304347 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr13-497 chr13 41284926 41285136 + 16.0 0.000 intron (NM_001354073, intron 1 of 14) LTR44|LTR|ERV1 -21455 NM_004294 9617 Hs.382176 NM_004294 ENSG00000120662 MTRF1 MRF1|MTTRF1|RF1 mitochondrial translation release factor 1 protein-coding chr12-613 chr12 105330570 105330780 + 16.0 0.000 promoter-TSS (NM_001145199) promoter-TSS (NM_001145199) -16 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr9-808 chr9 114505401 114505611 + 16.0 0.000 promoter-TSS (NM_001173425) promoter-TSS (NM_001173425) -33 NM_001173425 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr17-1516 chr17 59964070 59964280 + 16.0 0.000 promoter-TSS (NR_110816) promoter-TSS (NR_110816) 565 NM_016125 51136 Hs.531701 NM_016125 ENSG00000189050 RNFT1 PTD016 ring finger protein, transmembrane 1 protein-coding chr12-1038 chr12 64461701 64461911 + 16.0 0.000 intron (NM_013254, intron 3 of 20) MER77B|LTR|ERVL 9686 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr9-1852 chr9 20355212 20355422 + 16.0 0.000 intron (NM_001286691, intron 8 of 10) intron (NM_001286691, intron 8 of 10) 55921 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr3-1020 chr3 123774136 123774346 + 16.0 0.000 intron (NM_053025, intron 4 of 33) intron (NM_053025, intron 4 of 33) 84597 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr2-1451 chr2 8139459 8139669 + 16.0 0.000 intron (NR_034135, intron 7 of 8) intron (NR_034135, intron 7 of 8) -162750 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr11-2255 chr11 114366922 114367132 + 16.0 0.000 intron (NR_120567, intron 2 of 2) intron (NR_120567, intron 2 of 2) 13012 NR_120567 101928940 Hs.409846 NR_120567 ENSG00000256195 LOC101928940 - uncharacterized LOC101928940 ncRNA chr9-1941 chr9 31542412 31542622 + 16.0 0.000 Intergenic Intergenic -161027 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr16-849 chr16 30534110 30534320 + 16.0 0.000 exon (NM_023931, exon 1 of 2) exon (NM_023931, exon 1 of 2) 755 NM_001305018 65988 Hs.592032 NM_023931 ENSG00000169955 ZNF747 - zinc finger protein 747 protein-coding chr18-415 chr18 55096384 55096594 + 16.0 0.000 Intergenic Intergenic 27817 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr14-343 chr14 51989392 51989602 + 16.0 0.000 promoter-TSS (NM_016039) promoter-TSS (NM_016039) -49 NM_016039 51637 Hs.534457 NM_016039 ENSG00000087302 RTRAF C14orf166|CGI-99|CGI99|CLE|CLE7|LCRP369|RLLM1|hCLE|hCLE1 RNA transcription, translation and transport factor protein-coding chr3-1170 chr3 142501322 142501532 + 16.0 0.000 intron (NM_001354579, intron 29 of 45) intron (NM_001354579, intron 29 of 45) -53365 NM_001282859 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr1-2707 chr1 224503693 224503903 + 16.0 0.000 intron (NM_001322302, intron 2 of 6) intron (NM_001322302, intron 2 of 6) 68949 NR_136294 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr9-1954 chr9 74873171 74873381 + 16.0 0.000 intron (NM_017662, intron 1 of 38) L2c|LINE|L2 14071 NM_001177311 140803 Hs.272225 NM_017662 ENSG00000119121 TRPM6 CHAK2|HMGX|HOMG|HOMG1|HSH transient receptor potential cation channel subfamily M member 6 protein-coding chr12-876 chr12 54560501 54560711 + 16.0 0.000 promoter-TSS (NM_001315535) promoter-TSS (NM_001315535) -859 NM_001315535 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding chr19-1753 chr19 4519298 4519508 + 16.0 0.000 promoter-TSS (NM_001367868) promoter-TSS (NM_001367868) -917 NM_001367868 729359 Hs.591387 NM_001080400 ENSG00000167676 PLIN4 KIAA1881|S3-12 perilipin 4 protein-coding chr10-1406 chr10 95308797 95309007 + 16.0 0.000 Intergenic AluYb8|SINE|Alu -17899 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr9-2050 chr9 16628071 16628281 + 16.0 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -98638 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr1-3091 chr1 31689953 31690163 + 16.0 0.000 intron (NM_001856, intron 22 of 70) intron (NM_001856, intron 22 of 70) 13959 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr16-1648 chr16 30086608 30086818 + 16.0 0.000 intron (NM_004608, intron 7 of 8) intron (NM_004608, intron 7 of 8) 5171 NM_004608 6911 Hs.198301 NM_004608 ENSG00000149922 TBX6 SCDO5 T-box transcription factor 6 protein-coding chr3-1915 chr3 173938237 173938447 + 16.0 0.000 intron (NM_001365928, intron 4 of 6) MLT1I|LTR|ERVL-MaLR -17546 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr11-1667 chr11 10570376 10570586 + 16.0 0.000 intron (NR_034094, intron 1 of 2) AluJb|SINE|Alu -1816 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr5-1458 chr5 56026981 56027191 + 16.0 0.000 Intergenic Intergenic 31919 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA chr8-839 chr8 120939122 120939332 + 16.0 0.000 Intergenic Intergenic -127181 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr2-4015 chr2 100813577 100813787 + 16.0 0.000 Intergenic Intergenic -6457 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr17-3092 chr17 82528887 82529097 + 16.0 0.000 intron (NM_004514, intron 1 of 8) MER20|DNA|hAT-Charlie 9260 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr17-2172 chr17 50221557 50221767 + 16.0 0.000 Intergenic Intergenic 6968 NR_110806 101927230 Hs.514326 NR_110806 LINC01969 - long intergenic non-protein coding RNA 1969 ncRNA chr2-2087 chr2 225756202 225756412 + 16.0 0.000 Intergenic Intergenic 355421 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr7-1211 chr7 80499380 80499590 + 16.0 0.000 intron (NM_001102386, intron 1 of 7) AluJb|SINE|Alu 12579 NM_001102386 346562 Hs.335049 NM_001102386 ENSG00000214415 GNAT3 GDCA G protein subunit alpha transducin 3 protein-coding chr6-1629 chr6 104613557 104613767 + 16.0 0.000 Intergenic X2_LINE|LINE|CR1 245884 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr8-1256 chr8 134527810 134528020 + 16.0 0.000 intron (NM_020863, intron 12 of 15) intron (NM_020863, intron 12 of 15) -70156 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr3-1235 chr3 124627653 124627863 + 16.0 0.000 intron (NM_007064, intron 1 of 26) intron (NM_007064, intron 1 of 26) 43099 NM_001322994 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr10-1697 chr10 23400007 23400217 + 16.0 0.000 Intergenic Intergenic -39157 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr18-300 chr18 3688793 3689003 + 16.0 0.000 intron (NM_001308390, intron 4 of 10) intron (NM_001308390, intron 4 of 10) 85161 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr19-1807 chr19 1658643 1658853 + 16.0 0.000 Intergenic Intergenic -6133 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr14-872 chr14 79167271 79167481 + 16.0 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -32606 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr16-728 chr16 75434063 75434273 + 16.0 0.000 promoter-TSS (NM_006324) promoter-TSS (NM_006324) -665 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr1-3039 chr1 3219245 3219455 + 16.0 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 91375 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr12-2561 chr12 109775269 109775479 + 16.0 0.000 Intergenic Intergenic -1887 NR_026662 84983 Hs.675961 NM_032897 ENSG00000255650 FAM222A-AS1 - FAM222A antisense RNA 1 ncRNA chrX-421 chrX 37405923 37406133 + 16.0 0.000 intron (NM_000950, intron 2 of 4) intron (NM_000950, intron 2 of 4) 56664 NM_000950 5638 Hs.190341 NM_000950 ENSG00000130962 PRRG1 PRGP1 proline rich and Gla domain 1 protein-coding chr7-1510 chr7 4695015 4695225 + 16.0 0.000 intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) 12825 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chrX-317 chrX 135098897 135099107 + 16.0 0.000 promoter-TSS (NM_001348255) promoter-TSS (NM_001348255) -290 NM_001348255 644596 Hs.656427 NM_001348255 ENSG00000196972 SMIM10L2B LINC00086|LINC00087|NCRNA00086|NCRNA00087|SMIM10L2A small integral membrane protein 10 like 2B protein-coding chr21-294 chr21 14956813 14957023 + 16.0 0.000 Intergenic L2c|LINE|L2 -38250 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr3-666 chr3 187291092 187291302 + 16.0 0.000 promoter-TSS (NR_135551) promoter-TSS (NR_135551) -75 NR_135551 101929130 NR_135551 ENSG00000283175 LOC101929130 - uncharacterized LOC101929130 ncRNA chr7-1358 chr7 74032015 74032225 + 16.0 0.000 intron (NM_001278915, intron 1 of 32) L3|LINE|CR1 3947 NM_001278916 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr11-4058 chr11 16876205 16876415 + 16.0 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) 49712 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr1-3006 chr1 220300571 220300781 + 16.0 0.000 Intergenic Intergenic -28223 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr6-1287 chr6 129641614 129641824 + 16.0 0.000 intron (NM_033515, intron 2 of 14) intron (NM_033515, intron 2 of 14) 68458 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr11-4575 chr11 127607166 127607376 + 16.0 0.000 Intergenic Intergenic 336201 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr6-949 chr6 159692522 159692732 + 16.0 0.000 exon (NM_001322816, exon 2 of 2) exon (NM_001322816, exon 2 of 2) 614 NM_001322815 6648 Hs.487046 NM_000636 ENSG00000112096 SOD2 IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD superoxide dismutase 2 protein-coding chr1-3351 chr1 58395290 58395500 + 16.0 0.000 Intergenic MIR3|SINE|MIR -144848 NM_001353980 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr1-2297 chr1 26772902 26773112 + 16.0 0.000 intron (NM_139135, intron 14 of 19) intron (NM_139135, intron 14 of 19) -14956 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr14-1034 chr14 69543567 69543777 + 16.0 0.000 Intergenic Intergenic 31199 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr10-1325 chr10 90587263 90587473 + 16.0 0.000 Intergenic Intergenic -46563 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr12-1441 chr12 103969445 103969655 + 16.0 0.000 intron (NM_001363612, intron 1 of 8) L3|LINE|CR1 3678 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr11-1532 chr11 125772792 125773002 + 16.0 0.000 Intergenic Intergenic 5931 NM_212555 399967 Hs.369185 NM_212555 ENSG00000196844 PATE2 C11orf38|PATE-M|UNQ3112 prostate and testis expressed 2 protein-coding chr11-2099 chr11 112042587 112042797 + 16.0 0.000 intron (NM_001931, intron 7 of 13) L4_C_Mam|LINE|RTE-X 17878 NM_001931 1737 Hs.335551 NM_001931 ENSG00000150768 DLAT DLTA|E2|PDC-E2|PDCE2 dihydrolipoamide S-acetyltransferase protein-coding chr5-1788 chr5 43061438 43061648 + 16.0 0.000 intron (NR_104651, intron 2 of 2) intron (NR_104651, intron 2 of 2) 5428 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA chr19-1226 chr19 15266116 15266326 + 16.0 0.000 intron (NM_001330384, intron 4 of 11) intron (NM_001330384, intron 4 of 11) 14230 NM_014299 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr3-1883 chr3 134326916 134327126 + 16.0 0.000 Intergenic Intergenic 13445 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr8-362 chr8 144265391 144265601 + 16.0 0.000 promoter-TSS (NM_001080514) promoter-TSS (NM_001080514) -957 NM_001080514 642658 Hs.553250 NM_001008271 ENSG00000260428 SCX SCXA|SCXB|bHLHa48 scleraxis bHLH transcription factor protein-coding chr15-599 chr15 41416773 41416983 + 16.0 0.000 promoter-TSS (NM_015138) promoter-TSS (NM_015138) -226 NM_015138 23168 Hs.511096 NM_015138 ENSG00000137815 RTF1 GTL7|KIAA0252 RTF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr11-1949 chr11 119120656 119120866 + 16.0 0.000 promoter-TSS (NM_001351964) promoter-TSS (NM_001351964) -762 NM_001351962 25988 Hs.504091 NM_015517 ENSG00000172273 HINFP HiNF-P|MIZF|ZNF743 histone H4 transcription factor protein-coding chr12-1021 chr12 30822606 30822816 + 16.0 0.000 Intergenic CpG 27030 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr1-2510 chr1 207578951 207579161 + 16.0 0.000 intron (NM_000573, intron 21 of 38) intron (NM_000573, intron 21 of 38) -66077 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr6-889 chr6 105135162 105135372 + 16.0 0.000 intron (NM_001199563, intron 1 of 7) intron (NM_001199563, intron 1 of 7) 1079 NM_147147 11149 Hs.221660 NM_007073 ENSG00000112276 BVES CARICK|HBVES|LGMD2X|LGMDR25|POP1|POPDC1 blood vessel epicardial substance protein-coding chr17-2088 chr17 81152434 81152644 + 16.0 0.000 intron (NM_001080395, intron 1 of 13) AluJb|SINE|Alu -12968 NM_001354639 388428 Hs.591202 NM_207389 ENSG00000225180 PVALEF AATK-AS1 parvalbumin like EF-hand containing protein-coding chr11-1864 chr11 121241044 121241254 + 16.0 0.000 Intergenic MER52C|LTR|ERV1 -51622 NM_006918 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr1-1591 chr1 43554503 43554713 + 16.0 0.000 intron (NM_001329137, intron 6 of 34) intron (NM_001329137, intron 6 of 34) 23725 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr4-470 chr4 88007384 88007594 + 16.0 0.000 promoter-TSS (NM_000297) promoter-TSS (NM_000297) -146 NR_156488 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr18-524 chr18 59996523 59996733 + 16.0 0.000 Intergenic Intergenic 96632 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr13-659 chr13 51235673 51235883 + 16.0 0.000 intron (NM_001242312, intron 2 of 3) intron (NM_001242312, intron 2 of 3) 13380 NM_001242312 220108 Hs.71913 NM_145019 ENSG00000150510 FAM124A - family with sequence similarity 124 member A protein-coding chr8-862 chr8 70839789 70839999 + 16.0 0.000 Intergenic Intergenic 170555 NM_001287259 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chrX-643 chrX 39705361 39705571 + 16.0 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 44250 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr15-530 chr15 63909828 63910038 + 16.0 0.000 intron (NM_014326, intron 11 of 11) intron (NM_014326, intron 11 of 11) -18341 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr20-454 chr20 45611069 45611279 + 16.0 0.000 intron (NM_147198, intron 2 of 4) LTR78|LTR|ERV1 -18565 NM_080753 140832 Hs.199380 NM_080753 ENSG00000180305 WFDC10A C20orf146|WAP10|dJ688G8.3 WAP four-disulfide core domain 10A protein-coding chr17-1064 chr17 70169511 70169721 + 16.0 0.000 promoter-TSS (NR_036534) promoter-TSS (NR_036534) 81 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr1-4277 chr1 10773740 10773950 + 16.0 0.000 intron (NM_001079843, intron 1 of 20) intron (NM_001079843, intron 1 of 20) 22801 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr2-963 chr2 207769766 207769976 + 16.0 0.000 promoter-TSS (NM_003468) promoter-TSS (NM_003468) 35 NM_003468 7855 Hs.17631 NM_003468 ENSG00000163251 FZD5 C2orf31|HFZ5 frizzled class receptor 5 protein-coding chr3-2280 chr3 74523878 74524088 + 16.0 0.000 Intergenic Intergenic -2843 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr12-1510 chr12 53770433 53770643 + 16.0 0.000 Intergenic Intergenic -13504 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr5-656 chr5 14352132 14352342 + 16.0 0.000 intron (NM_007118, intron 11 of 56) intron (NM_007118, intron 11 of 56) -111746 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr1-3519 chr1 181988708 181988918 + 16.0 0.000 Intergenic L2|LINE|L2 72899 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr3-1151 chr3 61807965 61808175 + 16.0 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 246499 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr7-813 chr7 5417556 5417766 + 16.0 0.000 intron (NM_001080495, intron 2 of 29) L2a|LINE|L2 5885 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr1-3357 chr1 81664534 81664744 + 16.0 0.000 intron (NM_001366008, intron 3 of 26) intron (NM_001366008, intron 3 of 26) -35131 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr15-619 chr15 42915025 42915235 + 16.0 0.000 intron (NM_173500, intron 1 of 14) MER44B|DNA|TcMar-Tigger 5648 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr15-288 chr15 98852333 98852543 + 16.0 0.000 intron (NM_000875, intron 2 of 20) CpG 68012 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr1-2179 chr1 41633828 41634038 + 16.0 0.000 intron (NM_001127714, intron 1 of 7) MER110A|LTR|ERV1 -149250 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr12-956 chr12 106248434 106248644 + 16.0 0.000 promoter-TSS (NM_006825) promoter-TSS (NM_006825) -519 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr10-1689 chr10 5776264 5776474 + 16.0 0.000 intron (NM_001494, intron 6 of 10) intron (NM_001494, intron 6 of 10) 37065 NM_001494 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr1-2203 chr1 77126319 77126529 + 16.0 0.000 intron (NM_005482, intron 9 of 10) L1MC4|LINE|L1 66281 NR_106978 102466995 NR_106978 ENSG00000276081 MIR7156 hsa-mir-7156 microRNA 7156 ncRNA chr2-2003 chr2 62938212 62938422 + 16.0 0.000 intron (NM_001142615, intron 10 of 22) intron (NM_001142615, intron 10 of 22) 109394 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr1-1570 chr1 18884204 18884414 + 16.0 0.000 intron (NM_001161504, intron 5 of 14) intron (NM_001161504, intron 5 of 14) -1034 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 - microRNA 4695 ncRNA chr8-1208 chr8 95793112 95793322 + 16.0 0.000 intron (NR_038206, intron 3 of 4) intron (NR_038206, intron 3 of 4) 155131 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr5-1324 chr5 128062302 128062512 + 16.0 0.000 non-coding (NR_152806, exon 3 of 5) non-coding (NR_152806, exon 3 of 5) 20768 NR_152811 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA chr1-1720 chr1 34859663 34859873 + 16.0 0.000 promoter-TSS (NM_001164824) promoter-TSS (NM_001164824) -19 NM_138428 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding chr2-816 chr2 239979357 239979567 + 16.0 0.000 intron (NM_001322019, intron 9 of 9) intron (NM_001322019, intron 9 of 9) -36368 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr7-1192 chr7 46229615 46229825 + 16.0 0.000 Intergenic L2|LINE|L2 -308448 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr8-832 chr8 94905410 94905620 + 16.0 0.000 intron (NM_001354534, intron 1 of 8) intron (NM_001354534, intron 1 of 8) 9716 NR_148904 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr11-1607 chr11 43498398 43498608 + 16.0 0.000 Intergenic MIRb|SINE|MIR -61153 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA chr2-4322 chr2 237466387 237466597 + 16.0 0.000 Intergenic L4_C_Mam|LINE|RTE-X -19918 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr5-1200 chr5 77867398 77867608 + 16.0 0.000 Intergenic Intergenic -17153 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr7-1355 chr7 54995758 54995968 + 16.0 0.000 Intergenic Intergenic -23154 NM_201284 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr3-2182 chr3 188673899 188674109 + 16.0 0.000 intron (NM_005578, intron 6 of 10) intron (NM_005578, intron 6 of 10) -14777 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr1-2407 chr1 222817587 222817797 + 16.0 0.000 intron (NM_032890, intron 1 of 9) intron (NM_032890, intron 1 of 9) 2653 NM_032890 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr16-1546 chr16 70659626 70659836 + 16.0 0.000 exon (NM_001172771, exon 6 of 7) exon (NM_001172771, exon 6 of 7) 26322 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr1-2358 chr1 42342564 42342774 + 16.0 0.000 Intergenic Intergenic -6789 NM_001198850 22887 Hs.26023 NM_014947 ENSG00000198815 FOXJ3 - forkhead box J3 protein-coding chr13-781 chr13 44174831 44175041 + 16.0 0.000 Intergenic L1M1|LINE|L1 -13679 NM_024058 79024 Hs.730073 NM_024058 ENSG00000139656 SMIM2 C13orf44 small integral membrane protein 2 protein-coding chr21-305 chr21 39156097 39156307 + 16.0 0.000 Intergenic Intergenic 27249 NM_003720 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chr2-2404 chr2 25473915 25474125 + 16.0 0.000 intron (NM_033147, intron 10 of 19) intron (NM_033147, intron 10 of 19) -131430 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr11-1544 chr11 12088009 12088219 + 16.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -22462 NM_001282668 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr9-675 chr9 134260878 134261088 + 16.0 0.000 Intergenic Intergenic 34414 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr16-1788 chr16 2482113 2482323 + 16.0 0.000 intron (NM_020705, intron 1 of 6) intron (NM_020705, intron 1 of 6) 7091 NM_001199107 57465 Hs.353087 NM_020705 ENSG00000162065 TBC1D24 DFNA65|DFNB86|DOORS|EIEE16|FIME|TLDC6 TBC1 domain family member 24 protein-coding chr2-3466 chr2 156322986 156323196 + 16.0 0.000 Intergenic Intergenic 9630 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr10-1656 chr10 109963527 109963737 + 16.0 0.000 intron (NR_038943, intron 2 of 4) intron (NR_038943, intron 2 of 4) -32741 NM_001320591 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr14-1150 chr14 33404218 33404428 + 16.0 0.000 intron (NM_001165893, intron 3 of 10) intron (NM_001165893, intron 3 of 10) -304614 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr3-2065 chr3 174439807 174440017 + 16.0 0.000 Intergenic Intergenic -419422 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr20-696 chr20 8361429 8361639 + 16.0 0.000 intron (NM_182734, intron 2 of 32) MER5A|DNA|hAT-Charlie 112830 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr5-3276 chr5 111953320 111953530 + 16.0 0.000 intron (NR_046678, intron 2 of 3) L3|LINE|CR1 23507 NM_001142474 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr18-637 chr18 29181577 29181787 + 16.0 0.000 Intergenic Intergenic -1004552 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr13-834 chr13 60648144 60648354 + 16.0 0.000 Intergenic MER106B|DNA|hAT-Charlie -24706 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr17-978 chr17 7842084 7842294 + 16.0 0.000 intron (NM_001080424, intron 1 of 21) CpG 2272 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr3-1546 chr3 194783129 194783339 + 16.0 0.000 Intergenic Intergenic -14525 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr7-986 chr7 73006133 73006343 + 16.0 0.000 promoter-TSS (NR_040582) promoter-TSS (NR_040582) 158 NR_130940 100101440 Hs.292996 NR_130940 PMS2P7 PMS2L15|PMS2LP2|PMSR7 PMS1 homolog 2, mismatch repair system component pseudogene 7 pseudo chr6-485 chr6 2841336 2841546 + 16.0 0.000 intron (NR_073112, intron 1 of 6) intron (NR_073112, intron 1 of 6) 422 NM_030666 1992 Hs.381167 NM_030666 ENSG00000021355 SERPINB1 EI|ELANH2|HEL-S-27|HEL57|LEI|M/NEI|MNEI|PI-2|PI2 serpin family B member 1 protein-coding chr14-585 chr14 52314108 52314318 + 16.0 0.000 promoter-TSS (NM_000956) promoter-TSS (NM_000956) -99 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chr9-425 chr9 137423052 137423262 + 16.0 0.000 promoter-TSS (NM_017820) promoter-TSS (NM_017820) 5 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr12-607 chr12 57127701 57127911 + 16.0 0.000 promoter-TSS (NM_002332) promoter-TSS (NM_002332) -677 NM_002332 4035 Hs.162757 NM_002332 ENSG00000123384 LRP1 A2MR|APOER|APR|CD91|IGFBP-3R|IGFBP3R|IGFBP3R1|KPA|LRP|LRP1A|TGFBR5 LDL receptor related protein 1 protein-coding chr1-5167 chr1 165207850 165208060 + 16.0 0.000 intron (NM_177398, intron 7 of 8) intron (NM_177398, intron 7 of 8) 148286 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr20-955 chr20 35821764 35821974 + 16.0 0.000 intron (NM_016436, intron 2 of 17) L2a|LINE|L2 49854 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding chr6-1047 chr6 2789239 2789449 + 16.0 0.000 Intergenic Intergenic -18968 NM_001347872 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr7-632 chr7 100127247 100127457 + 16.0 0.000 intron (NM_203397, intron 1 of 1) CpG 385 NM_203397 255374 Hs.632319 NM_203397 ENSG00000214309 MBLAC1 - metallo-beta-lactamase domain containing 1 protein-coding chr12-1896 chr12 66439210 66439420 + 16.0 0.000 intron (NM_001366722, intron 13 of 24) intron (NM_001366722, intron 13 of 24) 136770 NR_135080 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr16-574 chr16 85799549 85799759 + 16.0 0.000 promoter-TSS (NM_001318786) promoter-TSS (NM_001318786) -41 NM_001318794 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr3-2322 chr3 129560490 129560700 + 16.0 0.000 intron (NM_015103, intron 30 of 35) intron (NM_015103, intron 30 of 35) 12210 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr8-670 chr8 56074588 56074798 + 16.0 0.000 promoter-TSS (NR_002437) promoter-TSS (NR_002437) 101 NR_149110 105375847 NR_149110 ENSG00000253603 CERNA3 CTA competing endogenous lncRNA 3 for miR-645 ncRNA chr1-1420 chr1 20613957 20614167 + 16.0 0.000 intron (NM_001785, intron 3 of 3) intron (NM_001785, intron 3 of 3) -19396 NM_032409 65018 Hs.389171 NM_032409 ENSG00000158828 PINK1 BRPK|PARK6 PTEN induced kinase 1 protein-coding chr3-1364 chr3 25468969 25469179 + 16.0 0.000 intron (NR_110892, intron 2 of 6) intron (NR_110892, intron 2 of 6) 10764 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr8-1036 chr8 67481485 67481695 + 16.0 0.000 intron (NR_136224, intron 4 of 4) intron (NR_136224, intron 4 of 4) 137756 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr11-1860 chr11 111911907 111912117 + 16.0 0.000 promoter-TSS (NR_037651) promoter-TSS (NR_037651) -242 NM_001289808 1410 Hs.53454 NM_001885 ENSG00000109846 CRYAB CMD1II|CRYA2|CTPP2|CTRCT16|HEL-S-101|HSPB5|MFM2 crystallin alpha B protein-coding chr1-2208 chr1 93081741 93081951 + 16.0 0.000 intron (NM_001164393, intron 1 of 12) MER3|DNA|hAT-Charlie 2563 NM_007358 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr4-992 chr4 143728061 143728271 + 16.0 0.000 Intergenic L2c|LINE|L2 -27491 NM_001168235 166752 Hs.252714 NM_001168235 ENSG00000183090 FREM3 - FRAS1 related extracellular matrix 3 protein-coding chr10-509 chr10 32953425 32953635 + 16.0 0.000 intron (NM_002211, intron 1 of 15) intron (NM_002211, intron 1 of 15) 4364 NM_133376 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr11-990 chr11 126585893 126586103 + 16.0 0.000 intron (NM_001301097, intron 1 of 15) AmnSINE1|SINE|5S-Deu-L2 -66780 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr2-3492 chr2 200353965 200354175 + 16.0 0.000 intron (NM_001282743, intron 2 of 11) intron (NM_001282743, intron 2 of 11) 45120 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr4-1720 chr4 185738146 185738356 + 16.0 0.000 intron (NM_001145672, intron 1 of 20) intron (NM_001145672, intron 1 of 20) 37603 NM_001145673 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr7-1288 chr7 2712240 2712450 + 16.0 0.000 exon (NM_001284355, exon 6 of 6) exon (NM_001284355, exon 6 of 6) 24143 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr15-663 chr15 66798646 66798856 + 16.0 0.000 Intergenic Intergenic 96515 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr6-1085 chr6 56329565 56329775 + 16.0 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) 64458 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr10-1093 chr10 52864557 52864767 + 16.0 0.000 Intergenic Intergenic -92962 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr11-2563 chr11 106318457 106318667 + 16.0 0.000 Intergenic Intergenic 67155 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr6-1052 chr6 7148508 7148718 + 16.0 0.000 intron (NM_001003699, intron 1 of 12) Tigger15a|DNA|TcMar-Tigger 40652 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr3-669 chr3 50126397 50126607 + 16.0 0.000 intron (NR_135301, intron 2 of 3) intron (NR_135301, intron 2 of 3) -25514 NR_045388 100775107 Hs.439480 NR_045388 ENSG00000281691 RBM5-AS1 LUST RBM5 antisense RNA 1 ncRNA chr4-820 chr4 137124321 137124531 + 16.0 0.000 intron (NR_149105, intron 1 of 3) intron (NR_149105, intron 1 of 3) -69330 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr2-5097 chr2 13611273 13611483 + 16.0 0.000 Intergenic L1MC3|LINE|L1 -604365 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr10-1892 chr10 110772407 110772617 + 16.0 0.000 intron (NM_001134363, intron 1 of 13) Tigger3a|DNA|TcMar-Tigger 98392 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr1-2468 chr1 80375687 80375897 + 16.0 0.000 Intergenic Intergenic -159963 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr3-1687 chr3 22377389 22377599 + 16.0 0.000 Intergenic Intergenic 420355 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr7-2817 chr7 97952317 97952527 + 16.0 0.000 intron (NR_147989, intron 1 of 18) HERVE-int|LTR|ERV1 -11236 NR_049875 100847066 NR_049875 ENSG00000266318 MIR5692A1 - microRNA 5692a-1 ncRNA chr12-968 chr12 8197810 8198020 + 16.0 0.000 intron (NR_026788, intron 7 of 7) L1PBa|LINE|L1 17706 NR_026788 440078 Hs.512257 NR_026788 ENSG00000226711 FAM66C - family with sequence similarity 66 member C ncRNA chr10-904 chr10 5787524 5787734 + 16.0 0.000 intron (NM_001115156, intron 3 of 9) intron (NM_001115156, intron 3 of 9) 25805 NM_001494 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr6-1065 chr6 21885608 21885818 + 16.0 0.000 intron (NR_015410, intron 4 of 11) intron (NR_015410, intron 4 of 11) 219300 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr7-740 chr7 74279661 74279871 + 16.0 0.000 Intergenic Intergenic -9641 NM_032421 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr17-2042 chr17 44546880 44547090 + 16.0 0.000 Intergenic (CAGTGAG)n|Simple_repeat|Simple_repeat -10499 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr18-498 chr18 21362941 21363151 + 16.0 0.000 intron (NM_001142966, intron 1 of 32) intron (NM_001142966, intron 1 of 32) 120804 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr17-1942 chr17 81305175 81305385 + 16.0 0.000 non-coding (NR_038080, exon 4 of 4) non-coding (NR_038080, exon 4 of 4) 3968 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr4-1589 chr4 17067021 17067231 + 16.0 0.000 Intergenic MER91A|DNA|hAT-Tip100 118931 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr11-2406 chr11 8309539 8309749 + 16.0 0.000 Intergenic Intergenic -40857 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr2-5281 chr2 63792663 63792873 + 16.0 0.000 Intergenic L2a|LINE|L2 -48196 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr6-1757 chr6 57257857 57258067 + 16.0 0.000 Intergenic Intergenic 5384 NR_109774 100506188 Hs.485640 NR_109774 LOC100506188 - uncharacterized LOC100506188 ncRNA chr16-549 chr16 67431321 67431531 + 16.0 0.000 exon (NM_000196, exon 1 of 5) exon (NM_000196, exon 1 of 5) 305 NM_000196 3291 Hs.1376 NM_000196 ENSG00000176387 HSD11B2 AME|AME1|HSD11K|HSD2|SDR9C3 hydroxysteroid 11-beta dehydrogenase 2 protein-coding chr10-3605 chr10 92042154 92042364 + 16.0 0.000 Intergenic L1ME3A|LINE|L1 118489 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chr6-579 chr6 108736852 108737062 + 16.0 0.000 Intergenic Intergenic -14697 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr6-1363 chr6 55758611 55758821 + 16.0 0.000 intron (NM_001329756, intron 4 of 4) intron (NM_001329756, intron 4 of 4) 116874 NM_001329756 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr2-2792 chr2 20184253 20184463 + 16.0 0.000 Intergenic Intergenic 40772 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr17-2299 chr17 41195949 41196159 + 16.0 0.000 Intergenic Intergenic 6167 NM_001190460 728318 Hs.727478 NM_001190460 ENSG00000240542 KRTAP9-1 KAP9.1|KRTAP9L3 keratin associated protein 9-1 protein-coding chr18-231 chr18 79458449 79458659 + 16.0 0.000 intron (NM_001278672, intron 6 of 8) CpG 58255 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr2-2171 chr2 1988681 1988891 + 16.0 0.000 intron (NM_015025, intron 5 of 24) AluSz|SINE|Alu -244271 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr17-1785 chr17 65885827 65886037 + 16.0 0.000 intron (NM_001353129, intron 20 of 26) intron (NM_001353129, intron 20 of 26) -59389 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr7-1158 chr7 129401576 129401786 + 16.0 0.000 intron (NM_001130720, intron 6 of 16) intron (NM_001130720, intron 6 of 16) 25843 NM_001130722 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr20-525 chr20 32776866 32777076 + 16.0 0.000 intron (NM_175848, intron 1 of 21) intron (NM_175848, intron 1 of 21) -2881 NM_175850 1789 Hs.643024 NM_006892 ENSG00000088305 DNMT3B ICF|ICF1|M.HsaIIIB DNA methyltransferase 3 beta protein-coding chr9-1348 chr9 129715850 129716060 + 16.0 0.000 intron (NR_132102, intron 1 of 1) L2b|LINE|L2 2751 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr6-715 chr6 97282776 97282986 + 16.0 0.000 intron (NM_001350600, intron 1 of 23) CpG 335 NM_001350599 253714 Hs.444292 NM_198468 ENSG00000146263 MMS22L C6orf167|dJ39B17.2 MMS22 like, DNA repair protein protein-coding chr9-1450 chr9 136424953 136425163 + 16.0 0.000 Intergenic Intergenic 14400 NM_015160 23203 Hs.495471 NM_015160 ENSG00000165688 PMPCA Alpha-MPP|CLA1|CPD3|INPP5E|P-55|SCAR2 peptidase, mitochondrial processing alpha subunit protein-coding chr16-1219 chr16 84739840 84740050 + 16.0 0.000 intron (NR_073577, intron 2 of 11) intron (NR_073577, intron 2 of 11) 39945 NR_073577 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr9-1350 chr9 131304746 131304956 + 16.0 0.000 intron (NM_032728, intron 1 of 1) intron (NM_032728, intron 1 of 1) 15128 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr1-2705 chr1 223771917 223772127 + 16.0 0.000 intron (NM_001146068, intron 19 of 20) intron (NM_001146068, intron 19 of 20) 59483 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr1-3234 chr1 184567766 184567976 + 16.0 0.000 intron (NM_030806, intron 3 of 5) LTR38B|LTR|ERV1 180842 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr19-1110 chr19 11142682 11142892 + 16.0 0.000 Intergenic Intergenic 12995 NM_001317033 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr3-1185 chr3 195915062 195915272 + 16.0 0.000 Intergenic Intergenic -6158 NM_005781 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr9-1814 chr9 99445756 99445966 + 16.0 0.000 Intergenic Intergenic -70604 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr8-383 chr8 22561929 22562139 + 16.0 0.000 intron (NM_005775, intron 7 of 20) intron (NM_005775, intron 7 of 20) -3695 NM_001018003 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr1-1624 chr1 152183016 152183226 + 16.0 0.000 Intergenic Intergenic -23893 NM_001122965 126638 Hs.376144 NM_152364 ENSG00000215853 RPTN - repetin protein-coding chr5-2195 chr5 150055112 150055322 + 16.0 0.000 intron (NM_001288705, intron 19 of 20) intron (NM_001288705, intron 19 of 20) 31423 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr8-1383 chr8 20376267 20376477 + 16.0 0.000 Intergenic Intergenic -72409 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr17-1286 chr17 10128070 10128280 + 16.0 0.000 intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) 70431 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr2-3218 chr2 224301039 224301249 + 16.0 0.000 Intergenic HERVH-int|LTR|ERV1 100850 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr11-1840 chr11 74929827 74930037 + 16.0 0.000 intron (NM_001270380, intron 6 of 14) intron (NM_001270380, intron 6 of 14) 19159 NM_001270380 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr3-2329 chr3 133041406 133041616 + 16.0 0.000 intron (NM_023943, intron 1 of 5) intron (NM_023943, intron 1 of 5) 3223 NM_001136469 66000 Hs.191616 NM_023943 ENSG00000144868 TMEM108 CT124|RTLN transmembrane protein 108 protein-coding chr3-1850 chr3 104460777 104460987 + 16.0 0.000 Intergenic HERV16-int|LTR|ERVL -905831 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr12-1100 chr12 122835967 122836177 + 16.0 0.000 intron (NM_003959, intron 1 of 31) CpG 615 NM_001303097 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr10-2617 chr10 79368354 79368564 + 16.0 0.000 Intergenic L1MB8|LINE|L1 20990 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr7-1499 chr7 144835274 144835484 + 16.0 0.000 intron (NM_001350887, intron 1 of 6) MIRb|SINE|MIR 561 NR_146935 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr6-2033 chr6 54002056 54002266 + 16.0 0.000 intron (NR_046832, intron 2 of 3) intron (NR_046832, intron 2 of 3) 3271 NR_046832 100874282 Hs.571169 NR_046832 ENSG00000236996 MLIP-IT1 - MLIP intronic transcript 1 ncRNA chr2-2583 chr2 236175201 236175411 + 16.0 0.000 Intergenic Intergenic -6920 NM_001485 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr14-1458 chr14 103393965 103394175 + 16.0 0.000 intron (NM_001128920, intron 1 of 15) intron (NM_001128920, intron 1 of 15) 8655 NM_001128918 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr20-838 chr20 31605161 31605371 + 16.0 0.000 promoter-TSS (NM_181353) promoter-TSS (NM_181353) -23 NM_181353 3397 Hs.504609 NM_002165 ENSG00000125968 ID1 ID|bHLHb24 inhibitor of DNA binding 1, HLH protein protein-coding chr1-4649 chr1 184484547 184484757 + 16.0 0.000 intron (NM_030806, intron 2 of 5) LTR86A2|LTR|ERVL 97623 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr1-1706 chr1 8424133 8424343 + 16.0 0.000 promoter-TSS (NR_125999) promoter-TSS (NR_125999) -406 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr16-1531 chr16 58011689 58011899 + 16.0 0.000 3' UTR (NM_001204911, exon 4 of 4) 3' UTR (NM_001204911, exon 4 of 4) 10387 NM_001195302 79650 Hs.408702 NM_024598 ENSG00000103005 USB1 C16orf57|HVSL1|Mpn1|PN|hUsb1 U6 snRNA biogenesis phosphodiesterase 1 protein-coding chr2-2489 chr2 144456662 144456872 + 16.0 0.000 intron (NM_001171653, intron 2 of 8) intron (NM_001171653, intron 2 of 8) -62847 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chr16-1155 chr16 30953938 30954148 + 16.0 0.000 3' UTR (NM_152288, exon 2 of 2) 3' UTR (NM_152288, exon 2 of 2) -3711 NM_014712 9739 Hs.297483 NM_014712 ENSG00000099381 SETD1A KMT2F|Set1|Set1A SET domain containing 1A, histone lysine methyltransferase protein-coding chr1-1456 chr1 12549950 12550160 + 16.0 0.000 Intergenic Intergenic 28968 NR_106788 102466722 NR_106788 ENSG00000276830 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA chr17-985 chr17 41717509 41717719 + 16.0 0.000 TTS (NM_001367461) TTS (NM_001367461) 5283 NM_000805 2520 Hs.2681 NM_000805 ENSG00000184502 GAST GAS gastrin protein-coding chrX-196 chrX 18425386 18425596 + 16.0 0.000 promoter-TSS (NM_001323289) promoter-TSS (NM_001323289) -114 NM_003159 6792 Hs.659851 NM_003159 ENSG00000008086 CDKL5 CFAP247|EIEE2|ISSX|STK9 cyclin dependent kinase like 5 protein-coding chr11-3293 chr11 86519123 86519333 + 16.0 0.000 intron (NM_001014811, intron 3 of 13) intron (NM_001014811, intron 3 of 13) 144341 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr6-643 chr6 134060381 134060591 + 16.0 0.000 Intergenic LTR67B|LTR|ERVL -7862 NM_145176 154091 Hs.486508 NM_145176 ENSG00000146411 SLC2A12 GLUT12|GLUT8 solute carrier family 2 member 12 protein-coding chrX-754 chrX 18833040 18833250 + 16.0 0.000 Intergenic LTR1C|LTR|ERV1 -57151 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr14-693 chr14 105448909 105449119 + 16.0 0.000 intron (NM_001203258, intron 3 of 20) intron (NM_001203258, intron 3 of 20) -23931 NR_073082 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr12-842 chr12 120194796 120195006 + 16.0 0.000 promoter-TSS (NM_006836) promoter-TSS (NM_006836) -186 NM_006836 10985 Hs.298716 NM_006836 ENSG00000089154 GCN1 GCN1L|GCN1L1|PRIC295 GCN1 activator of EIF2AK4 protein-coding chr10-965 chr10 69222397 69222607 + 16.0 0.000 intron (NM_025130, intron 1 of 17) intron (NM_025130, intron 1 of 17) 2170 NM_025130 80201 Hs.522988 NM_025130 ENSG00000156510 HKDC1 - hexokinase domain containing 1 protein-coding chr10-2383 chr10 104350278 104350488 + 16.0 0.000 TTS (NR_108036) TTS (NR_108036) 3192 NR_108036 100505869 Hs.338140 NR_108036 CFAP58-DT CCDC147-AS1|CFAP58-AS1|lncITPRIP-1 CFAP58 divergent transcript ncRNA chr22-1355 chr22 28230124 28230334 + 16.0 0.000 intron (NM_001145418, intron 5 of 22) intron (NM_001145418, intron 5 of 22) -229640 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr4-950 chr4 162647997 162648207 + 16.0 0.000 Intergenic L1PB4|LINE|L1 445526 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr4-1671 chr4 142598345 142598555 + 16.0 0.000 intron (NM_003866, intron 2 of 26) L1PA11|LINE|L1 248085 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr8-878 chr8 143389078 143389288 + 16.0 0.000 Intergenic Intergenic 20307 NM_052924 114822 Hs.521912 NM_052924 ENSG00000158106 RHPN1 ODF5|RHOPHILIN|RHPN rhophilin Rho GTPase binding protein 1 protein-coding chr12-1397 chr12 121364970 121365180 + 16.0 0.000 Intergenic L1MB7|LINE|L1 -10866 NM_001137559 51433 Hs.7101 NM_016237 ENSG00000089053 ANAPC5 APC5 anaphase promoting complex subunit 5 protein-coding chr16-1493 chr16 3946119 3946329 + 16.0 0.000 Intergenic Intergenic 4220 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr3-1368 chr3 42020943 42021153 + 16.0 0.000 Intergenic Intergenic -58945 NR_136342 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr17-1130 chr17 57893128 57893338 + 16.0 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 10156 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr6-1072 chr6 36852860 36853070 + 16.0 0.000 Intergenic MER5A1|DNA|hAT-Charlie -13521 NM_020939 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr1-1422 chr1 31745640 31745850 + 16.0 0.000 intron (NM_001294335, intron 4 of 32) OldhAT1|DNA|hAT-Ac 12990 NR_036216 100423028 NR_036216 ENSG00000266580 MIR4254 - microRNA 4254 ncRNA chr8-1129 chr8 120810255 120810465 + 16.0 0.000 intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) 1686 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr18-926 chr18 69903172 69903382 + 16.0 0.000 intron (NM_001303619, intron 1 of 4) intron (NM_001303619, intron 1 of 4) 44596 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr2-1289 chr2 161160325 161160535 + 16.0 0.000 promoter-TSS (NM_001199135) promoter-TSS (NM_001199135) 2 NM_001199135 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr7-1585 chr7 101941467 101941677 + 16.0 0.000 intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 123946 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr6-1226 chr6 122184565 122184775 + 16.0 0.000 Intergenic Intergenic -214881 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr1-736 chr1 13749023 13749233 + 16.0 0.000 promoter-TSS (NM_001007257) promoter-TSS (NM_001007257) -287 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr12-1016 chr12 15830014 15830224 + 16.0 0.000 Intergenic Intergenic -40731 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr18-658 chr18 47100366 47100576 + 16.0 0.000 intron (NM_001367621, intron 15 of 15) intron (NM_001367621, intron 15 of 15) 50029 NM_032124 84064 Hs.465041 NM_032124 ENSG00000167220 HDHD2 3110052N05Rik|HEL-S-301 haloacid dehalogenase like hydrolase domain containing 2 protein-coding chr17-840 chr17 82302864 82303074 + 16.0 0.000 Intergenic Intergenic -10155 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr11-1106 chr11 78023126 78023336 + 16.0 0.000 promoter-TSS (NM_023930) promoter-TSS (NM_023930) 45 NM_023930 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr6-1186 chr6 149696814 149697024 + 16.0 0.000 intron (NM_004690, intron 2 of 7) MIRb|SINE|MIR 19506 NR_073033 9113 Hs.549084 NM_004690 ENSG00000131023 LATS1 WARTS|wts large tumor suppressor kinase 1 protein-coding chr2-2518 chr2 177132807 177133017 + 16.0 0.000 Intergenic Intergenic 79499 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr2-2837 chr2 120722729 120722939 + 16.0 0.000 Intergenic L3|LINE|CR1 -13034 NM_001371271 chr22-614 chr22 19986469 19986679 + 16.0 0.000 intron (NM_001670, intron 3 of 19) intron (NM_001670, intron 3 of 19) 22821 NR_039918 100616414 NR_039918 ENSG00000284031 MIR4761 - microRNA 4761 ncRNA chr2-2218 chr2 127630534 127630744 + 16.0 0.000 intron (NM_001080527, intron 34 of 46) MIR3|SINE|MIR -15225 NM_001161415 2840 Hs.46453 NM_005291 ENSG00000144230 GPR17 - G protein-coupled receptor 17 protein-coding chr8-1013 chr8 143438649 143438859 + 15.9 0.000 intron (NM_015117, intron 11 of 11) intron (NM_015117, intron 11 of 11) -8022 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr18-463 chr18 32301979 32302189 + 15.9 0.000 intron (NM_001242409, intron 3 of 5) intron (NM_001242409, intron 3 of 5) 112045 NM_005925 4225 Hs.194777 NM_005925 ENSG00000141434 MEP1B - meprin A subunit beta protein-coding chrX-545 chrX 5708339 5708549 + 15.9 0.000 Intergenic Intergenic -517914 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr2-2306 chr2 85649694 85649904 + 15.9 0.000 TTS (NM_001256725) TTS (NM_001256725) 18400 NM_001367281 6439 Hs.512690 NM_000542 ENSG00000168878 SFTPB PSP-B|SFTB3|SFTP3|SMDP1|SP-B surfactant protein B protein-coding chr6-1218 chr6 72787653 72787863 + 15.9 0.000 intron (NM_001160132, intron 1 of 13) MamRep605|LTR?|LTR? 157263 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr6-989 chr6 1916846 1917056 + 15.9 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 259040 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr14-961 chr14 60723481 60723691 + 15.9 0.000 exon (NM_017420, exon 1 of 3) exon (NM_017420, exon 1 of 3) 765 NM_017420 51804 Hs.97849 NM_017420 ENSG00000100625 SIX4 AREC3 SIX homeobox 4 protein-coding chr2-2746 chr2 174589386 174589596 + 15.9 0.000 intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) -31419 NR_104088 101954278 NR_104088 ENSG00000202337 RNU6-8 U6-8 RNA, U6 small nuclear 8 snRNA chr19-1249 chr19 48835779 48835989 + 15.9 0.000 intron (NM_016246, intron 1 of 8) intron (NM_016246, intron 1 of 8) 607 NM_016246 51171 Hs.18788 NM_016246 ENSG00000087076 HSD17B14 DHRS10|SDR47C1|retSDR3 hydroxysteroid 17-beta dehydrogenase 14 protein-coding chr11-1854 chr11 96200341 96200551 + 15.9 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -140992 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr10-2075 chr10 102816192 102816402 + 15.9 0.000 TTS (NM_017787) TTS (NM_017787) 21116 NM_000102 1586 Hs.438016 NM_000102 ENSG00000148795 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450 family 17 subfamily A member 1 protein-coding chr20-474 chr20 63981147 63981357 + 15.9 0.000 exon (NM_012469, exon 1 of 21) exon (NM_012469, exon 1 of 21) 120 NM_012469 24148 Hs.31334 NM_012469 ENSG00000101161 PRPF6 ANT-1|ANT1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|hPrp6 pre-mRNA processing factor 6 protein-coding chr1-1866 chr1 85629064 85629274 + 15.9 0.000 Intergenic Intergenic 48408 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr2-1952 chr2 231926374 231926584 + 15.9 0.000 promoter-TSS (NM_024409) promoter-TSS (NM_024409) -83 NM_024409 4880 Hs.247916 NM_024409 ENSG00000163273 NPPC CNP|CNP2 natriuretic peptide C protein-coding chr2-1465 chr2 46147012 46147222 + 15.9 0.000 intron (NM_005400, intron 12 of 14) intron (NM_005400, intron 12 of 14) -150290 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr14-1499 chr14 49069753 49069963 + 15.9 0.000 Intergenic L1M1|LINE|L1 516522 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr9-890 chr9 129271108 129271318 + 15.9 0.000 Intergenic Intergenic -11203 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr3-1736 chr3 133570192 133570402 + 15.9 0.000 Intergenic Intergenic -3389 NM_001134422 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr11-765 chr11 114439253 114439463 + 15.9 0.000 promoter-TSS (NM_015523) promoter-TSS (NM_015523) -109 NM_015523 25996 Hs.677190 NM_015523 ENSG00000076043 REXO2 CGI-114|REX2|RFN|SFN RNA exonuclease 2 protein-coding chr1-3136 chr1 58652590 58652800 + 15.9 0.000 Intergenic Intergenic 47367 NM_001085487 114803 Hs.744921 NM_001085487 ENSG00000162601 MYSM1 2A-DUB|2ADUB|BMFS4 Myb like, SWIRM and MPN domains 1 protein-coding chr1-4984 chr1 59454872 59455082 + 15.9 0.000 intron (NM_001350794, intron 5 of 14) intron (NM_001350794, intron 5 of 14) -60653 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr3-1057 chr3 17632488 17632698 + 15.9 0.000 intron (NM_001349090, intron 1 of 21) Tigger1|DNA|TcMar-Tigger 67427 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr1-3889 chr1 55916667 55916877 + 15.9 0.000 intron (NR_147162, intron 2 of 2) intron (NR_147162, intron 2 of 2) 28191 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr11-1996 chr11 45771403 45771613 + 15.9 0.000 promoter-TSS (NR_027134) promoter-TSS (NR_027134) 76 NR_027134 374387 Hs.632142 NM_199137 ENSG00000205106 LINC02716 DKFZp779M0652 long intergenic non-protein coding RNA 2716 ncRNA chr12-1808 chr12 2739930 2740140 + 15.9 0.000 Intergenic Intergenic -48878 NR_045725 100652846 Hs.683896 NR_045725 ENSG00000246627 CACNA1C-AS1 - CACNA1C antisense RNA 1 ncRNA chr4-1530 chr4 136801935 136802145 + 15.9 0.000 intron (NR_149105, intron 3 of 3) intron (NR_149105, intron 3 of 3) -391716 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr7-1612 chr7 2785155 2785365 + 15.9 0.000 intron (NM_007353, intron 2 of 3) MIR3|SINE|MIR -22120 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr5-680 chr5 113806381 113806591 + 15.9 0.000 Intergenic X6B_LINE|LINE|CR1 292792 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr6-747 chr6 44172839 44173049 + 15.9 0.000 exon (NM_007058, exon 6 of 23) exon (NM_007058, exon 6 of 23) 14124 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr20-772 chr20 44693106 44693316 + 15.9 0.000 Intergenic Intergenic -21472 NR_034104 79015 Hs.671450 NM_024049 ENSG00000283440 LINC01260 - long intergenic non-protein coding RNA 1260 ncRNA chr2-4129 chr2 160523140 160523350 + 15.9 0.000 Intergenic Intergenic -29438 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr8-1025 chr8 22777427 22777637 + 15.9 0.000 intron (NM_001363233, intron 4 of 6) intron (NM_001363233, intron 4 of 6) -84052 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr17-2309 chr17 44007924 44008134 + 15.9 0.000 intron (NM_153006, intron 6 of 6) intron (NM_153006, intron 6 of 6) 3407 NM_153006 162417 Hs.8876 NM_153006 ENSG00000161653 NAGS AGAS|ARGA N-acetylglutamate synthase protein-coding chr6-1794 chr6 116255309 116255519 + 15.9 0.000 non-coding (NR_136520, exon 2 of 2) non-coding (NR_136520, exon 2 of 2) 1243 NM_001322937 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr1-1967 chr1 161612481 161612691 + 15.9 0.000 Intergenic CpG 6527 NR_024151 3311 Hs.662180 NR_024151 HSPA7 HSP70B heat shock protein family A (Hsp70) member 7 pseudo chr7-843 chr7 6271058 6271268 + 15.9 0.000 intron (NM_001367581, intron 1 of 13) intron (NM_001367581, intron 1 of 13) 1461 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr7-612 chr7 91940864 91941074 + 15.9 0.000 promoter-TSS (NM_005751) promoter-TSS (NM_005751) 94 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr1-1873 chr1 108692045 108692255 + 15.9 0.000 promoter-TSS (NM_001349768) promoter-TSS (NM_001349768) -160 NM_001349761 55119 Hs.342307 NM_018061 ENSG00000134186 PRPF38B NET1 pre-mRNA processing factor 38B protein-coding chr1-2342 chr1 1432736 1432946 + 15.9 0.000 intron (NR_125994, intron 1 of 1) intron (NR_125994, intron 1 of 1) 1732 NR_125995 102724312 NR_125994 LINC01770 - long intergenic non-protein coding RNA 1770 ncRNA chr8-682 chr8 102729587 102729797 + 15.9 0.000 Intergenic Intergenic 73444 NR_160673 101927245 NR_160672 LOC101927245 - uncharacterized LOC101927245 ncRNA chr9-1130 chr9 120876034 120876244 + 15.9 0.000 intron (NM_001286840, intron 1 of 14) intron (NM_001286840, intron 1 of 14) 1049 NM_015651 26147 Hs.460124 NM_015651 ENSG00000119403 PHF19 MTF2L1|PCL3|TDRD19B PHD finger protein 19 protein-coding chr13-423 chr13 29991477 29991687 + 15.9 0.000 Intergenic Intergenic 55051 NR_033889 440131 Hs.132371 NM_001010918 LINC00544 - long intergenic non-protein coding RNA 544 ncRNA chr12-818 chr12 6229974 6230184 + 15.9 0.000 intron (NM_001769, intron 2 of 7) intron (NM_001769, intron 2 of 7) 29679 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr7-1255 chr7 39650809 39651019 + 15.9 0.000 intron (NM_005402, intron 1 of 4) MLT1F1|LTR|ERVL-MaLR 27342 NM_005402 5898 Hs.6906 NM_005402 ENSG00000006451 RALA RAL RAS like proto-oncogene A protein-coding chr6-1461 chr6 14842092 14842302 + 15.9 0.000 Intergenic L1ME5|LINE|L1 -403872 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr10-857 chr10 95756159 95756369 + 15.9 0.000 non-coding (NR_038444, exon 6 of 6) non-coding (NR_038444, exon 6 of 6) 101 NM_001776 953 Hs.576612 NM_001776 ENSG00000138185 ENTPD1 ATPDase|CD39|NTPDase-1|SPG64 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding chr11-1039 chr11 3072893 3073103 + 15.9 0.000 Intergenic Intergenic -15575 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr4-930 chr4 25448836 25449046 + 15.9 0.000 Intergenic Intergenic 71678 NM_001286756 29945 Hs.152173 NM_013367 ENSG00000053900 ANAPC4 APC4 anaphase promoting complex subunit 4 protein-coding chr4-1970 chr4 152894680 152894890 + 15.9 0.000 intron (NM_001025595, intron 8 of 8) intron (NM_001025595, intron 8 of 8) -41538 NM_001371116 chr9-980 chr9 131839775 131839985 + 15.9 0.000 Intergenic Intergenic -99936 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr6-863 chr6 36979390 36979600 + 15.9 0.000 intron (NR_130739, intron 2 of 11) intron (NR_130739, intron 2 of 11) 7056 NM_014341 23787 Hs.485262 NM_014341 ENSG00000137409 MTCH1 CGI-64|PIG60|PSAP|SLC25A49 mitochondrial carrier 1 protein-coding chr18-989 chr18 12659865 12660075 + 15.9 0.000 intron (NM_147163, intron 1 of 6) intron (NM_147163, intron 1 of 6) 1231 NM_147163 56984 Hs.464652 NM_020232 ENSG00000128789 PSMG2 CLAST3|HCCA3|HsT1707|MDS003|PAC2|TNFSF5IP1 proteasome assembly chaperone 2 protein-coding chr1-3658 chr1 99465706 99465916 + 15.9 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 21993 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr1-2930 chr1 36128656 36128866 + 15.9 0.000 Intergenic MIRb|SINE|MIR -3539 NM_001294347 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr7-860 chr7 55504580 55504790 + 15.9 0.000 intron (NM_001321242, intron 2 of 4) intron (NM_001321242, intron 2 of 4) 22195 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr7-2933 chr7 137400168 137400378 + 15.9 0.000 intron (NM_001321710, intron 30 of 32) intron (NM_001321710, intron 30 of 32) -56540 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr4-918 chr4 995756 995966 + 15.9 0.000 intron (NM_000203, intron 2 of 13) intron (NM_000203, intron 2 of 13) -2457 NM_134425 10861 Hs.658244 NM_022042 ENSG00000145217 SLC26A1 CAON|EDM4|SAT-1|SAT1 solute carrier family 26 member 1 protein-coding chr22-764 chr22 36374700 36374910 + 15.9 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 13262 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chrX-133 chrX 24150312 24150522 + 15.9 0.000 promoter-TSS (NR_046657) promoter-TSS (NR_046657) 688 NM_001178084 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr2-3143 chr2 186457059 186457269 + 15.9 0.000 Intergenic Intergenic -29096 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding chr13-316 chr13 51859052 51859262 + 15.9 0.000 Intergenic L1M4|LINE|L1 -2812 NM_031290 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr3-1139 chr3 40800496 40800706 + 15.9 0.000 Intergenic Intergenic 275641 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr16-2513 chr16 90035936 90036146 + 15.9 0.000 intron (NM_001286205, intron 5 of 10) intron (NM_001286205, intron 5 of 10) -6140 NR_122031 750 Hs.633032 NM_001214 ENSG00000221819 GAS8-AS1 C16orf3 GAS8 antisense RNA 1 ncRNA chr4-708 chr4 74933022 74933232 + 15.9 0.000 promoter-TSS (NM_015393) promoter-TSS (NM_015393) 11 NM_015393 25849 Hs.105460 NM_015393 ENSG00000169116 PARM1 Cipar1|DKFZP564O0823|PARM-1|WSC4 prostate androgen-regulated mucin-like protein 1 protein-coding chr11-1977 chr11 15124077 15124287 + 15.9 0.000 intron (NM_001042536, intron 1 of 12) intron (NM_001042536, intron 1 of 12) 9259 NM_001042536 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chrX-795 chrX 53403805 53404015 + 15.9 0.000 intron (NM_001281463, intron 14 of 25) intron (NM_001281463, intron 14 of 25) 1855 NR_106916 102465516 NR_106916 ENSG00000278204 MIR6857 hsa-mir-6857 microRNA 6857 ncRNA chr1-2505 chr1 203306578 203306788 + 15.9 0.000 intron (NM_006763, intron 1 of 1) intron (NM_006763, intron 1 of 1) 1164 NM_006763 7832 Hs.519162 NM_006763 ENSG00000159388 BTG2 APRO1|PC3|TIS21 BTG anti-proliferation factor 2 protein-coding chr4-643 chr4 94677074 94677284 + 15.9 0.000 Intergenic Intergenic 80354 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr7-874 chr7 101815950 101816160 + 15.9 0.000 promoter-TSS (NM_181500) promoter-TSS (NM_181500) 48 NM_001202543 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr13-244 chr13 97976092 97976302 + 15.9 0.000 intron (NM_002271, intron 3 of 28) CpG 22522 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr1-3391 chr1 207825808 207826018 + 15.9 0.000 Intergenic Intergenic -3210 NR_135299 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chr11-2727 chr11 9755712 9755922 + 15.9 0.000 non-coding (NR_033972, exon 3 of 3) non-coding (NR_033972, exon 3 of 3) -2476 NR_036485 283104 Hs.632156 NR_036485 ENSG00000246273 SBF2-AS1 - SBF2 antisense RNA 1 ncRNA chr11-951 chr11 33724491 33724701 + 15.9 0.000 intron (NM_000611, intron 1 of 3) intron (NM_000611, intron 1 of 3) -1644 NM_001127227 966 Hs.278573 NM_000611 ENSG00000085063 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule (CD59 blood group) protein-coding chr12-883 chr12 89384421 89384631 + 15.9 0.000 Intergenic Intergenic -32025 NM_001946 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr14-859 chr14 50001674 50001884 + 15.9 0.000 non-coding (NR_126500, exon 3 of 3) non-coding (NR_126500, exon 3 of 3) 4740 NR_126496 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr6-1411 chr6 136077961 136078171 + 15.9 0.000 intron (NM_018945, intron 2 of 12) intron (NM_018945, intron 2 of 12) -5239 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr16-2714 chr16 87678366 87678576 + 15.9 0.000 intron (NM_020655, intron 2 of 4) AluSx|SINE|Alu 75963 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr10-1506 chr10 18627892 18628102 + 15.9 0.000 intron (NM_001351118, intron 1 of 8) L1PA3|LINE|L1 23590 NM_182543 221078 Hs.396175 NM_182543 ENSG00000241058 NSUN6 4933414E04Rik|ARL5B-AS1|NOPD1 NOP2/Sun RNA methyltransferase 6 protein-coding chr6-356 chr6 44237520 44237730 + 15.9 0.000 Intergenic Intergenic -8541 NM_001271970 3326 Hs.509736 NM_007355 ENSG00000096384 HSP90AB1 D6S182|HSP84|HSP90B|HSPC2|HSPCB heat shock protein 90 alpha family class B member 1 protein-coding chr2-2417 chr2 32652744 32652954 + 15.9 0.000 intron (NM_017735, intron 5 of 19) intron (NM_017735, intron 5 of 19) 17594 NR_039922 100616219 NR_039922 ENSG00000265057 MIR4765 - microRNA 4765 ncRNA chr3-1741 chr3 144643806 144644016 + 15.9 0.000 Intergenic Intergenic 670830 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr6-1299 chr6 168957066 168957276 + 15.9 0.000 intron (NR_136250, intron 2 of 3) intron (NR_136250, intron 2 of 3) 7211 NR_136249 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr18-100 chr18 24014457 24014667 + 15.9 0.000 promoter-TSS (NM_001243425) promoter-TSS (NM_001243425) -192 NM_001243425 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr7-1704 chr7 1107517 1107727 + 15.9 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) 19509 NM_001098201 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr15-709 chr15 39232575 39232785 + 15.9 0.000 Intergenic Intergenic -17989 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr4-1862 chr4 170004870 170005080 + 15.9 0.000 intron (NM_001301647, intron 1 of 1) intron (NM_001301647, intron 1 of 1) -1198 NM_001009554 9848 Hs.593942 NM_021647 ENSG00000198948 MFAP3L NYD-sp9 microfibril associated protein 3 like protein-coding chr9-1866 chr9 76403361 76403571 + 15.9 0.000 Intergenic Intergenic 4867 NR_026890 653162 Hs.655646 NR_026890 RPSAP9 LAMR1P9|RPSA_20_986 ribosomal protein SA pseudogene 9 pseudo chr6-946 chr6 154554943 154555153 + 15.9 0.000 Intergenic Intergenic -44363 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr20-808 chr20 33675985 33676195 + 15.9 0.000 3' UTR (NM_005225, exon 7 of 7) 3' UTR (NM_005225, exon 7 of 7) -1662 NM_031232 63941 Hs.516986 NM_031231 ENSG00000125967 NECAB3 APBA2BP|EFCBP3|NIP1|STIP3|SYTIP2|XB51|dJ63M2.4|dJ63M2.5 N-terminal EF-hand calcium binding protein 3 protein-coding chr7-974 chr7 23570678 23570888 + 15.9 0.000 Intergenic L1M1|LINE|L1 15744 NR_002711 1197 Hs.632635 NR_002711 CLK2P1 CLK2P CDC like kinase 2, pseudogene 1 pseudo chr14-1284 chr14 88856865 88857075 + 15.9 0.000 intron (NR_159362, intron 8 of 14) intron (NR_159362, intron 8 of 14) 32319 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr14-1549 chr14 67269951 67270161 + 15.9 0.000 intron (NM_001256550, intron 2 of 14) intron (NM_001256550, intron 2 of 14) 28621 NM_022474 64398 Hs.652312 NM_022474 ENSG00000072415 MPP5 PALS1 membrane palmitoylated protein 5 protein-coding chr7-988 chr7 75915726 75915936 + 15.9 0.000 TTS (NR_039795) TTS (NR_039795) 634 NR_039795 100616270 NR_039795 ENSG00000284334 MIR4651 mir-4651 microRNA 4651 ncRNA chr15-1499 chr15 46737005 46737215 + 15.9 0.000 Intergenic AluSq2|SINE|Alu -446979 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr8-1505 chr8 60731467 60731677 + 15.9 0.000 intron (NM_017780, intron 1 of 37) intron (NM_017780, intron 1 of 37) -9687 NM_001316690 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr9-1929 chr9 4126505 4126715 + 15.9 0.000 intron (NM_001042413, intron 2 of 10) intron (NM_001042413, intron 2 of 10) 25573 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr10-891 chr10 100482487 100482697 + 15.9 0.000 exon (NM_003393, exon 6 of 6) exon (NM_003393, exon 6 of 6) 19583 NM_003393 7479 Hs.421281 NM_003393 ENSG00000075290 WNT8B - Wnt family member 8B protein-coding chr5-759 chr5 176412969 176413179 + 15.9 0.000 intron (NR_045724, intron 1 of 5) intron (NR_045724, intron 1 of 5) -2251 NM_001364126 1212 Hs.484241 NM_001834 ENSG00000175416 CLTB LCB clathrin light chain B protein-coding chr12-1686 chr12 110532053 110532263 + 15.9 0.000 3' UTR (NM_001286535, exon 11 of 11) 3' UTR (NM_001286535, exon 11 of 11) 29827 NM_001286531 144715 Hs.97794 NM_152442 ENSG00000151164 RAD9B - RAD9 checkpoint clamp component B protein-coding chr1-2368 chr1 67791796 67792006 + 15.9 0.000 intron (NM_018841, intron 1 of 3) L2a|LINE|L2 -40387 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12, DIRAS3 and WLS antisense RNA 1 ncRNA chr5-1864 chr5 140182893 140183103 + 15.9 0.000 intron (NM_032412, intron 1 of 2) intron (NM_032412, intron 1 of 2) 7810 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr2-1927 chr2 200159543 200159753 + 15.9 0.000 Intergenic Intergenic -146231 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr13-413 chr13 44004902 44005112 + 15.9 0.000 Intergenic Intergenic -17328 NR_026955 121838 Hs.201441 NR_026955 LINC00284 NCRNA00284 long intergenic non-protein coding RNA 284 ncRNA chr8-1254 chr8 133575316 133575526 + 15.9 0.000 Intergenic Intergenic -3534 NM_003033 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr1-4014 chr1 173476037 173476247 + 15.9 0.000 intron (NR_037845, intron 1 of 2) intron (NR_037845, intron 1 of 2) 1013 NR_037845 100506023 Hs.731284 NR_037845 LOC100506023 - uncharacterized LOC100506023 ncRNA chr11-1744 chr11 120336958 120337168 + 15.9 0.000 5' UTR (NM_001198665, exon 1 of 40) 5' UTR (NM_001198665, exon 1 of 40) 650 NM_001198665 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr2-1142 chr2 70901373 70901583 + 15.9 0.000 intron (NM_012476, intron 1 of 2) CpG 902 NM_012476 25806 Hs.249170 NM_012476 ENSG00000116035 VAX2 DRES93 ventral anterior homeobox 2 protein-coding chr10-611 chr10 92591596 92591806 + 15.9 0.000 Intergenic CpG -1429 NM_004523 3832 Hs.8878 NM_004523 ENSG00000138160 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding chr17-2478 chr17 72984586 72984796 + 15.9 0.000 intron (NM_001352692, intron 4 of 9) intron (NM_001352692, intron 4 of 9) 107997 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr9-1215 chr9 125854912 125855122 + 15.9 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 106834 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr12-931 chr12 124188637 124188847 + 15.9 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -100422 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr5-2082 chr5 176601546 176601756 + 15.9 0.000 intron (NM_052899, intron 1 of 1) intron (NM_052899, intron 1 of 1) 8505 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr2-3747 chr2 1687085 1687295 + 15.9 0.000 intron (NM_012293, intron 4 of 22) intron (NM_012293, intron 4 of 22) 57325 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr1-730 chr1 241640218 241640428 + 15.9 0.000 promoter-TSS (NM_014322) promoter-TSS (NM_014322) 46 NM_014322 23596 Hs.409081 NM_014322 ENSG00000054277 OPN3 ECPN|PPP1R116 opsin 3 protein-coding chr17-957 chr17 64975371 64975581 + 15.9 0.000 non-coding (NR_026903, exon 1 of 5) non-coding (NR_026903, exon 1 of 5) 109 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo chr14-411 chr14 104805423 104805633 + 15.9 0.000 TTS (NM_001137601) TTS (NM_001137601) 4427 NM_001137601 100128927 Hs.170853 NM_001137601 ENSG00000179627 ZBTB42 LCCS6|ZNF925 zinc finger and BTB domain containing 42 protein-coding chr9-4388 chr9 136089811 136090021 + 15.9 0.000 intron (NM_144653, intron 1 of 5) intron (NM_144653, intron 1 of 5) 5373 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr18-593 chr18 46418751 46418961 + 15.9 0.000 intron (NM_001256758, intron 1 of 5) intron (NM_001256758, intron 1 of 5) 84632 NR_046357 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr15-399 chr15 67521229 67521439 + 15.9 0.000 promoter-TSS (NR_040055) promoter-TSS (NR_040055) 203 NM_001143936 145853 Hs.438385 NM_001143936 ENSG00000189227 C15orf61 - chromosome 15 open reading frame 61 protein-coding chr22-1252 chr22 20588637 20588847 + 15.9 0.000 Intergenic Intergenic 80695 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr6-514 chr6 43477555 43477765 + 15.9 0.000 promoter-TSS (NM_080604) promoter-TSS (NM_080604) 90 NM_001146019 93643 Hs.520145 NM_080604 ENSG00000137221 TJAP1 PILT|TJP4 tight junction associated protein 1 protein-coding chr13-288 chr13 51451555 51451765 + 15.9 0.000 intron (NM_001306091, intron 2 of 19) CpG 1376 NM_001039938 26512 Hs.439440 NM_012141 ENSG00000102786 INTS6 DBI-1|DDX26|DDX26A|DICE1|HDB|INT6|Notchl2 integrator complex subunit 6 protein-coding chr22-491 chr22 21942459 21942669 + 15.9 0.000 non-coding (NR_147620, exon 2 of 2) non-coding (NR_147620, exon 2 of 2) 4327 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr2-684 chr2 65227608 65227818 + 15.9 0.000 promoter-TSS (NM_005722) promoter-TSS (NM_005722) 18 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr13-901 chr13 44653451 44653661 + 15.9 0.000 intron (NR_149082, intron 2 of 3) intron (NR_149082, intron 2 of 3) 13187 NR_149082 106144541 Hs.578031 NR_149082 LINC00407 - long intergenic non-protein coding RNA 407 ncRNA chr2-2109 chr2 23900970 23901180 + 15.9 0.000 intron (NR_125717, intron 1 of 28) intron (NR_125717, intron 1 of 28) 26048 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr9-2126 chr9 100309624 100309834 + 15.9 0.000 intron (NM_001161584, intron 12 of 14) intron (NM_001161584, intron 12 of 14) 42842 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr2-423 chr2 10448380 10448590 + 15.9 0.000 promoter-TSS (NM_001287188) promoter-TSS (NM_001287188) -158 NM_002539 4953 Hs.467701 NM_002539 ENSG00000115758 ODC1 ODC ornithine decarboxylase 1 protein-coding chr19-2170 chr19 12052061 12052271 + 15.9 0.000 intron (NM_001080404, intron 1 of 3) MER4D|LTR|ERV1 795 NM_001080404 729747 Hs.704229 NM_001080404 ENSG00000257446 ZNF878 - zinc finger protein 878 protein-coding chr12-1948 chr12 108551610 108551820 + 15.9 0.000 intron (NM_014706, intron 1 of 18) L1MDa|LINE|L1 9458 NM_014706 9733 Hs.584842 NM_014706 ENSG00000075856 SART3 DSAP1|P100|RP11-13G14|TIP110|p110|p110(nrb) spliceosome associated factor 3, U4/U6 recycling protein protein-coding chr11-3241 chr11 72580242 72580452 + 15.9 0.000 intron (NM_001143839, intron 24 of 29) intron (NM_001143839, intron 24 of 29) 9691 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr15-1000 chr15 70852529 70852739 + 15.9 0.000 promoter-TSS (NM_001284357) promoter-TSS (NM_001284357) -605 NM_001284357 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr17-2062 chr17 62696338 62696548 + 15.9 0.000 Intergenic Intergenic -9763 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr5-446 chr5 322205 322415 + 15.9 0.000 intron (NM_020731, intron 1 of 11) CpG 18134 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr7-1486 chr7 128884846 128885056 + 15.9 0.000 intron (NM_001366122, intron 27 of 39) intron (NM_001366122, intron 27 of 39) 18621 NM_001195150 100130705 Hs.641532 NM_001195150 ENSG00000272899 ATP6V1FNB - ATP6V1F neighbor protein-coding chr22-872 chr22 39065992 39066202 + 15.9 0.000 Intergenic LTR7|LTR|ERV1 -10908 NM_001349437 60489 Hs.660143 NM_021822 ENSG00000239713 APOBEC3G A3G|ARCD|ARP-9|ARP9|CEM-15|CEM15|MDS019|bK150C2.7|dJ494G10.1 apolipoprotein B mRNA editing enzyme catalytic subunit 3G protein-coding chr16-1439 chr16 64440586 64440796 + 15.9 0.000 Intergenic Intergenic 681372 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr17-1915 chr17 72339304 72339514 + 15.9 0.000 Intergenic Intergenic -3402 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr2-2576 chr2 230219793 230220003 + 15.9 0.000 promoter-TSS (NM_004509) promoter-TSS (NM_004509) 86 NM_004510 3431 Hs.145150 NM_004509 ENSG00000135899 SP110 IFI41|IFI75|IPR1|VODI SP110 nuclear body protein protein-coding chr15-674 chr15 81189647 81189857 + 15.9 0.000 Intergenic Intergenic -7127 NM_001352685 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding chr2-4704 chr2 228847697 228847907 + 15.9 0.000 Intergenic Intergenic -236407 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr13-318 chr13 80037677 80037887 + 15.9 0.000 Intergenic Intergenic 26705 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr4-1373 chr4 77040305 77040515 + 15.9 0.000 Intergenic Intergenic 34500 NM_001348133 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr13-373 chr13 36346599 36346809 + 15.9 0.000 promoter-TSS (NM_001142296) promoter-TSS (NM_001142296) 93 NM_001142295 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding chr11-1516 chr11 77602563 77602773 + 15.9 0.000 intron (NM_001363477, intron 1 of 1) intron (NM_001363477, intron 1 of 1) 12715 NM_173039 282679 Hs.503345 NM_173039 ENSG00000178301 AQP11 AQPX1 aquaporin 11 protein-coding chr4-1617 chr4 69881126 69881336 + 15.9 0.000 Intergenic Intergenic -21086 NM_005420 6783 Hs.479898 NM_005420 ENSG00000109193 SULT1E1 EST|EST-1|ST1E1|STE sulfotransferase family 1E member 1 protein-coding chr12-1388 chr12 101917684 101917894 + 15.9 0.000 intron (NM_018370, intron 5 of 6) intron (NM_018370, intron 5 of 6) 40209 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr5-1061 chr5 141476417 141476627 + 15.9 0.000 exon (NM_032402, exon 1 of 1) exon (NM_032402, exon 1 of 1) 556 NM_002588 5098 Hs.368160 NM_002588 ENSG00000240184 PCDHGC3 PC43|PCDH-GAMMA-C3|PCDH2 protocadherin gamma subfamily C, 3 protein-coding chr14-1255 chr14 105317499 105317709 + 15.9 0.000 intron (NM_015197, intron 1 of 23) L1ME3E|LINE|L1 -2027 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr3-1068 chr3 52495803 52496013 + 15.9 0.000 intron (NM_015136, intron 1 of 68) intron (NM_015136, intron 1 of 68) 570 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr4-766 chr4 76012284 76012494 + 15.9 0.000 intron (NM_001130017, intron 1 of 9) intron (NM_001130017, intron 1 of 9) 1209 NM_001130017 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr19-1617 chr19 46513474 46513684 + 15.9 0.000 intron (NM_001205281, intron 3 of 3) MER5B|DNA|hAT-Charlie -17712 NM_020709 57469 Hs.7193 NM_020709 ENSG00000204851 PNMA8B PNMAL2 PNMA family member 8B protein-coding chr10-386 chr10 28677365 28677575 + 15.9 0.000 promoter-TSS (NM_012342) promoter-TSS (NM_012342) -51 NM_012342 25805 Hs.533336 NM_012342 ENSG00000095739 BAMBI NMA BMP and activin membrane bound inhibitor protein-coding chr7-894 chr7 16709135 16709345 + 15.9 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -44515 NM_014399 27075 Hs.364544 NM_014399 ENSG00000106537 TSPAN13 NET-6|NET6|TM4SF13 tetraspanin 13 protein-coding chr17-1880 chr17 44972204 44972414 + 15.9 0.000 Intergenic Intergenic -4006 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr16-951 chr16 84159096 84159306 + 15.9 0.000 5' UTR (NM_001318756, exon 1 of 8) 5' UTR (NM_001318756, exon 1 of 8) 161 NM_001318756 123872 Hs.310164 NM_178452 ENSG00000154099 DNAAF1 CILD13|LRRC50|ODA7|swt dynein axonemal assembly factor 1 protein-coding chr15-724 chr15 62306919 62307129 + 15.9 0.000 Intergenic Intergenic -2290 NR_107034 102465869 NR_107034 ENSG00000277919 MIR8067 hsa-mir-8067 microRNA 8067 ncRNA chr13-684 chr13 24671794 24672004 + 15.9 0.000 Intergenic Intergenic -8509 NM_001676 479 Hs.147111 NM_001676 ENSG00000075673 ATP12A ATP1AL1|HK ATPase H+/K+ transporting non-gastric alpha2 subunit protein-coding chr7-2297 chr7 74253806 74254016 + 15.9 0.000 intron (NM_001278791, intron 1 of 10) intron (NM_001278791, intron 1 of 10) 488 NM_181471 5982 Hs.647062 NM_002914 ENSG00000049541 RFC2 RFC40 replication factor C subunit 2 protein-coding chr10-1016 chr10 50470912 50471122 + 15.9 0.000 intron (NM_147156, intron 3 of 10) intron (NM_147156, intron 3 of 10) 152939 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr13-180 chr13 99087707 99087917 + 15.9 0.000 non-coding (NR_047482, exon 1 of 1) non-coding (NR_047482, exon 1 of 1) 1089 NR_047482 100861541 Hs.344872 NR_047482 DOCK9-DT DOCK9-AS2 DOCK9 divergent transcript ncRNA chr6-1023 chr6 110982051 110982261 + 15.9 0.000 intron (NM_001289111, intron 1 of 8) CpG 118 NM_032194 84154 Hs.372265 NM_032194 ENSG00000197498 RPF2 BXDC1|bA397G5.4 ribosome production factor 2 homolog protein-coding chr3-2190 chr3 5057782 5057992 + 15.9 0.000 Intergenic Intergenic -64405 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr15-488 chr15 39782611 39782821 + 15.9 0.000 promoter-TSS (NR_135665) promoter-TSS (NR_135665) 125 NM_152597 161835 Hs.129598 NM_152597 ENSG00000150667 FSIP1 HSD10 fibrous sheath interacting protein 1 protein-coding chr2-1199 chr2 156332701 156332911 + 15.9 0.000 promoter-TSS (NM_006186) promoter-TSS (NM_006186) -85 NM_173173 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr2-2481 chr2 128510794 128511004 + 15.9 0.000 Intergenic Intergenic -192031 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr1-2164 chr1 25501076 25501286 + 15.9 0.000 TTS (NM_001282564) TTS (NM_001282564) -42404 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr3-2421 chr3 196286937 196287147 + 15.9 0.000 intron (NM_005017, intron 1 of 9) MIR3|SINE|MIR 684 NM_001312673 5130 Hs.135997 NM_005017 ENSG00000161217 PCYT1A CCTA|CT|CTA|CTPCT|PCYT1|SMDCRD phosphate cytidylyltransferase 1, choline, alpha protein-coding chr9-1281 chr9 15423625 15423835 + 15.9 0.000 intron (NR_161450, intron 1 of 7) intron (NR_161450, intron 1 of 7) 854 NR_161450 6619 Hs.546299 NM_003084 ENSG00000164975 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex polypeptide 3 protein-coding chr1-2790 chr1 217078166 217078376 + 15.9 0.000 promoter-TSS (NM_001350125) promoter-TSS (NM_001350125) 16 NM_001350125 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr17-976 chr17 5078287 5078497 + 15.9 0.000 promoter-TSS (NM_153018) promoter-TSS (NM_153018) -75 NM_153018 124961 Hs.48832 NM_153018 ENSG00000180787 ZFP3 ZNF752 ZFP3 zinc finger protein protein-coding chr11-1739 chr11 116202696 116202906 + 15.9 0.000 Intergenic MIR3|SINE|MIR -436621 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr3-1130 chr3 8756581 8756791 + 15.9 0.000 intron (NM_001354656, intron 3 of 3) LTR16|LTR|ERVL 12045 NM_001354656 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr16-1517 chr16 30445750 30445960 + 15.9 0.000 promoter-TSS (NM_012248) promoter-TSS (NM_012248) 19 NM_012248 22928 Hs.118725 NM_012248 ENSG00000179918 SEPHS2 SPS2 selenophosphate synthetase 2 protein-coding chrX-365 chrX 20141185 20141395 + 15.9 0.000 TTS (NR_046592) TTS (NR_046592) 548 NM_001412 1964 Hs.522590 NM_001412 ENSG00000173674 EIF1AX EIF1A|EIF1AP1|EIF4C|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A X-linked protein-coding chr1-3077 chr1 22089819 22090029 + 15.9 0.000 intron (NM_001039802, intron 6 of 6) intron (NM_001039802, intron 6 of 6) 37215 NM_044472 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr16-985 chr16 86931733 86931943 + 15.9 0.000 Intergenic CpG -125946 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr10-1421 chr10 615795 616005 + 15.9 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -12664 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr5-1138 chr5 122723668 122723878 + 15.9 0.000 intron (NR_109881, intron 3 of 11) intron (NR_109881, intron 3 of 11) 6787 NR_109881 101927379 Hs.536399 NR_109881 ENSG00000251538 LINC02201 - long intergenic non-protein coding RNA 2201 ncRNA chr2-3748 chr2 1727374 1727584 + 15.9 0.000 intron (NM_012293, intron 1 of 22) MIRc|SINE|MIR 17036 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr14-731 chr14 104688000 104688210 + 15.9 0.000 Intergenic Intergenic -1501 NM_032714 64423 Hs.24956 NM_022489 ENSG00000203485 INF2 C14orf151|C14orf173|CMTDIE|FSGS5|pp9484 inverted formin, FH2 and WH2 domain containing protein-coding chr15-320 chr15 75579225 75579435 + 15.9 0.000 promoter-TSS (NM_002833) promoter-TSS (NM_002833) -15 NM_002833 5780 Hs.445775 NM_002833 ENSG00000169410 PTPN9 MEG2|PTPMEG2 protein tyrosine phosphatase non-receptor type 9 protein-coding chr16-2078 chr16 85718036 85718246 + 15.9 0.000 intron (NR_161452, intron 2 of 4) AluJb|SINE|Alu 23559 NR_031731 100302261 NR_031731 ENSG00000283416 MIR1910 MIRN1910|hsa-mir-1910|mir-1910 microRNA 1910 ncRNA chr9-902 chr9 6757073 6757283 + 15.9 0.000 promoter-TSS (NM_001353999) promoter-TSS (NM_001353999) -172 NR_130707 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr22-664 chr22 43067510 43067720 + 15.9 0.000 intron (NR_027779, intron 6 of 11) intron (NR_027779, intron 6 of 11) 21776 NM_012263 25809 Hs.660298 NM_012263 ENSG00000100271 TTLL1 C22orf7|HS323M22B tubulin tyrosine ligase like 1 protein-coding chr19-1212 chr19 4830651 4830861 + 15.9 0.000 intron (NM_182919, intron 1 of 1) L2a|LINE|L2 986 NM_182919 148022 Hs.29344 NM_014261 ENSG00000127666 TICAM1 IIAE6|MyD88-3|PRVTIRB|TICAM-1|TRIF toll like receptor adaptor molecule 1 protein-coding chr2-1222 chr2 238973438 238973648 + 15.9 0.000 Intergenic Intergenic -47274 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr2-2293 chr2 55616834 55617044 + 15.9 0.000 intron (NM_020463, intron 1 of 14) intron (NM_020463, intron 1 of 14) 683 NM_001282850 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding chr12-2281 chr12 110039124 110039334 + 15.9 0.000 3' UTR (NM_033121, exon 15 of 15) 3' UTR (NM_033121, exon 15 of 15) 9418 NR_148516 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr8-2020 chr8 102141299 102141509 + 15.9 0.000 Intergenic Intergenic 15972 NR_049859 100847001 NR_049859 ENSG00000266756 MIR5680 - microRNA 5680 ncRNA chr1-6509 chr1 25183561 25183771 + 15.9 0.000 Intergenic Intergenic 48836 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr8-393 chr8 102806448 102806658 + 15.9 0.000 promoter-TSS (NR_149020) promoter-TSS (NR_149020) -269 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr7-1630 chr7 24052881 24053091 + 15.9 0.000 Intergenic Intergenic -231204 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr17-1594 chr17 62553275 62553485 + 15.9 0.000 intron (NM_001284363, intron 6 of 19) intron (NM_001284363, intron 6 of 19) 72267 NM_001284363 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr16-1285 chr16 75000586 75000796 + 15.9 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 1667 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr7-2152 chr7 46945388 46945598 + 15.9 0.000 Intergenic Intergenic -248371 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr2-4576 chr2 85889125 85889335 + 15.9 0.000 promoter-TSS (NM_001354227) promoter-TSS (NM_001354227) -50 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr22-1733 chr22 21037787 21037997 + 15.9 0.000 Intergenic LTR24|LTR|ERV1 -3620 NR_030379 693234 NR_030379 ENSG00000207575 MIR649 MIRN649|hsa-mir-649 microRNA 649 ncRNA chr21-189 chr21 36321833 36322043 + 15.9 0.000 intron (NM_001320445, intron 1 of 15) intron (NM_001320445, intron 1 of 15) 1741 NM_015358 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr19-1464 chr19 55503890 55504100 + 15.9 0.000 intron (NM_001144950, intron 12 of 13) intron (NM_001144950, intron 12 of 13) 15559 NM_001144950 284297 Hs.554182 NM_182571 ENSG00000179954 SSC5D S5D-SRCRB scavenger receptor cysteine rich family member with 5 domains protein-coding chr19-1527 chr19 7395558 7395768 + 15.9 0.000 intron (NM_015318, intron 1 of 20) intron (NM_015318, intron 1 of 20) 518 NM_001367824 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr4-825 chr4 150176704 150176914 + 15.9 0.000 intron (NM_001040260, intron 2 of 15) intron (NM_001040260, intron 2 of 15) 98364 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr12-1300 chr12 124730446 124730656 + 15.9 0.000 Intergenic L1ME1|LINE|L1 109120 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr12-372 chr12 109097978 109098188 + 15.9 0.000 promoter-TSS (NM_003362) promoter-TSS (NM_003362) -89 NM_003362 7374 Hs.191334 NM_003362 ENSG00000076248 UNG DGU|HIGM4|HIGM5|UDG|UNG1|UNG15|UNG2 uracil DNA glycosylase protein-coding chr6-1425 chr6 149093738 149093948 + 15.9 0.000 Intergenic Intergenic -61182 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr2-1250 chr2 1686574 1686784 + 15.9 0.000 intron (NM_012293, intron 4 of 22) intron (NM_012293, intron 4 of 22) 57836 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr19-2039 chr19 2983918 2984128 + 15.9 0.000 intron (NM_001143986, intron 5 of 16) intron (NM_001143986, intron 5 of 16) 6459 NM_001143986 79816 Hs.334507 NM_024760 ENSG00000104953 TLE6 GRG6|PREMBL TLE family member 6, subcortical maternal complex member protein-coding chr10-1507 chr10 21292823 21293033 + 15.9 0.000 Intergenic Intergenic 80022 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr2-1319 chr2 60881224 60881434 + 15.9 0.000 promoter-TSS (NM_001291746) promoter-TSS (NM_001291746) -15 NR_033980 400957 Hs.170358 NR_033980 ENSG00000228414 LINC01185 - long intergenic non-protein coding RNA 1185 ncRNA chr18-406 chr18 29418168 29418378 + 15.9 0.000 Intergenic MER44B|DNA|TcMar-Tigger -880637 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr6-1032 chr6 145669778 145669988 + 15.9 0.000 intron (NM_001368131, intron 2 of 3) L2c|LINE|L2 16994 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr5-677 chr5 73626719 73626929 + 15.9 0.000 intron (NM_001177693, intron 1 of 35) intron (NM_001177693, intron 1 of 35) 666 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr2-1777 chr2 204625200 204625410 + 15.9 0.000 intron (NM_205863, intron 1 of 21) AmnSINE1|SINE|5S-Deu-L2 79830 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr16-1796 chr16 3157899 3158109 + 15.9 0.000 Intergenic CpG 13713 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chr11-1774 chr11 57567208 57567418 + 15.9 0.000 intron (NM_198183, intron 1 of 3) intron (NM_198183, intron 1 of 3) 359 NM_004223 9246 Hs.425777 NM_004223 ENSG00000156587 UBE2L6 RIG-B|UBCH8 ubiquitin conjugating enzyme E2 L6 protein-coding chr12-1348 chr12 8709495 8709705 + 15.9 0.000 intron (NM_001352271, intron 2 of 6) intron (NM_001352271, intron 2 of 6) 11609 NR_147949 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr3-1218 chr3 65784147 65784357 + 15.9 0.000 intron (NM_001365904, intron 1 of 24) L1MB8|LINE|L1 -109564 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr13-223 chr13 27054329 27054539 + 15.9 0.000 Intergenic L2b|LINE|L2 -71099 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr12-1165 chr12 25495691 25495901 + 15.9 0.000 TTS (NM_001352232) TTS (NM_001352232) 57487 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr22-975 chr22 28009459 28009669 + 15.9 0.000 intron (NM_001145418, intron 14 of 22) intron (NM_001145418, intron 14 of 22) -88952 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr16-1871 chr16 81936165 81936375 + 15.9 0.000 exon (NM_002661, exon 27 of 33) exon (NM_002661, exon 27 of 33) 75200 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr3-2141 chr3 115871757 115871967 + 15.9 0.000 intron (NM_001318915, intron 3 of 8) X6A_LINE|LINE|CR1 33264 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr11-1945 chr11 116679392 116679602 + 15.9 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 40075 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr1-1470 chr1 42380851 42381061 + 15.9 0.000 exon (NM_173642, exon 1 of 5) exon (NM_173642, exon 1 of 5) 164 NM_173642 284716 Hs.420244 NM_173642 ENSG00000177181 RIMKLA FAM80A|NAAGS|NAAGS-II ribosomal modification protein rimK like family member A protein-coding chr1-1610 chr1 85612840 85613050 + 15.9 0.000 Intergenic Intergenic 32184 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr17-512 chr17 81917997 81918207 + 15.9 0.000 promoter-TSS (NM_016538) promoter-TSS (NM_016538) 74 NM_016538 51547 Hs.514636 NM_016538 ENSG00000187531 SIRT7 SIR2L7 sirtuin 7 protein-coding chr1-562 chr1 19644041 19644251 + 15.9 0.000 promoter-TSS (NM_005380) promoter-TSS (NM_005380) -165 NM_005380 4681 Hs.654502 NM_005380 ENSG00000158747 NBL1 D1S1733E|DAN|DAND1|NB|NO3 NBL1, DAN family BMP antagonist protein-coding chr18-746 chr18 62814826 62815036 + 15.9 0.000 intron (NM_194449, intron 1 of 16) MLT1F2|LTR|ERVL-MaLR 99390 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr9-578 chr9 99906679 99906889 + 15.9 0.000 promoter-TSS (NR_038853) promoter-TSS (NR_038853) 130 NM_017919 55014 Hs.704031 NM_017919 ENSG00000136874 STX17 - syntaxin 17 protein-coding chr16-1761 chr16 88974333 88974543 + 15.9 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 2769 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr5-1477 chr5 90940652 90940862 + 15.9 0.000 intron (NR_003149, intron 83 of 89) intron (NR_003149, intron 83 of 89) 373645 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr1-3072 chr1 19373358 19373568 + 15.9 0.000 TTS (NM_001313932) TTS (NM_001313932) 61137 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr17-745 chr17 16215701 16215911 + 15.9 0.000 promoter-TSS (NM_006311) promoter-TSS (NM_006311) -272 NM_006311 9611 Hs.462323 NM_006311 ENSG00000141027 NCOR1 N-CoR|N-CoR1|PPP1R109|TRAC1|hN-CoR nuclear receptor corepressor 1 protein-coding chr17-1080 chr17 18682275 18682485 + 15.9 0.000 promoter-TSS (NM_001368134) promoter-TSS (NM_001368134) -66 NM_001368135 2310 Hs.592126 NM_001368134 FOXO3B FKHRL1P1|ZNF286C forkhead box O3B protein-coding chr6-609 chr6 148064788 148064998 + 15.9 0.000 Intergenic L1PA11|LINE|L1 -207435 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr15-719 chr15 56249201 56249411 + 15.9 0.000 Intergenic MER91C|DNA|hAT-Tip100 -4224 NM_001370561 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr9-1703 chr9 99184589 99184799 + 15.9 0.000 Intergenic Intergenic 37248 NR_024532 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2 alpha-1,3/1,6-mannosyltransferase protein-coding chr4-595 chr4 118591558 118591768 + 15.9 0.000 promoter-TSS (NR_109983) promoter-TSS (NR_109983) -81 NR_109983 729218 Hs.448518 NR_103825 LOC729218 - uncharacterized LOC729218 pseudo chr8-1193 chr8 55853294 55853504 + 15.9 0.000 Intergenic Intergenic -26436 NM_002350 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chr21-114 chr21 45288023 45288233 + 15.9 0.000 promoter-TSS (NR_148026) promoter-TSS (NR_148026) 76 NR_026943 642852 Hs.11637 NR_026943 ENSG00000223768 LINC00205 NCRNA00205 long intergenic non-protein coding RNA 205 ncRNA chr16-639 chr16 4943102 4943312 + 15.9 0.000 Intergenic Intergenic -6059 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chrX-794 chrX 52980518 52980728 + 15.9 0.000 intron (NM_001242492, intron 1 of 4) intron (NM_001242492, intron 1 of 4) 14849 NM_001242492 29057 Hs.6451 NM_014138 ENSG00000268350 FAM156A PRO0659|TMEM29 family with sequence similarity 156 member A protein-coding chr2-1875 chr2 45964279 45964489 + 15.9 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 312709 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr17-942 chr17 16214943 16215153 + 15.9 0.000 intron (NM_006311, intron 1 of 45) CpG 486 NM_006311 9611 Hs.462323 NM_006311 ENSG00000141027 NCOR1 N-CoR|N-CoR1|PPP1R109|TRAC1|hN-CoR nuclear receptor corepressor 1 protein-coding chr6-711 chr6 74606664 74606874 + 15.9 0.000 intron (NR_110856, intron 2 of 3) intron (NR_110856, intron 2 of 3) 522013 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr3-3086 chr3 135989209 135989419 + 15.9 0.000 intron (NM_001190447, intron 1 of 12) intron (NM_001190447, intron 1 of 12) 23586 NM_001190447 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr18-421 chr18 63379488 63379698 + 15.9 0.000 Intergenic L1M7|LINE|L1 -12387 NM_002035 2531 Hs.74050 NM_002035 ENSG00000119537 KDSR DHSR|EKVP4|FVT1|SDR35C1 3-ketodihydrosphingosine reductase protein-coding chr4-1186 chr4 25817036 25817246 + 15.9 0.000 intron (NM_001297592, intron 9 of 23) intron (NM_001297592, intron 9 of 23) 45847 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding chr9-1005 chr9 92634788 92634998 + 15.9 0.000 intron (NM_022755, intron 10 of 12) intron (NM_022755, intron 10 of 12) 16843 NR_036505 100128361 Hs.660395 NR_036505 LOC100128361 - uncharacterized LOC100128361 ncRNA chr19-1698 chr19 17370324 17370534 + 15.9 0.000 intron (NM_031310, intron 1 of 5) L1MB7|LINE|L1 6913 NM_031310 83483 Hs.107125 NM_031310 ENSG00000130300 PLVAP DIAR10|FELS|PV-1|PV1|gp68 plasmalemma vesicle associated protein protein-coding chr11-1589 chr11 8732787 8732997 + 15.9 0.000 intron (NM_005418, intron 5 of 22) intron (NM_005418, intron 5 of 22) -35886 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr4-510 chr4 98928201 98928411 + 15.9 0.000 intron (NM_001331017, intron 1 of 7) CpG 827 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr7-1294 chr7 11232502 11232712 + 15.9 0.000 Intergenic MamGypLTR2b|LTR|Gypsy 258735 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr6-749 chr6 73514218 73514428 + 15.9 0.000 Intergenic AluY|SINE|Alu 4115 NR_132981 106635684 NR_132981 SNORD141B - small nucleolar RNA, C/D box 141B snoRNA chr11-3322 chr11 111185391 111185601 + 15.9 0.000 Intergenic Intergenic -60229 NM_198498 341032 Hs.298685 NM_198498 ENSG00000150750 C11orf53 - chromosome 11 open reading frame 53 protein-coding chr19-972 chr19 58518925 58519135 + 15.9 0.000 5' UTR (NM_001316978, exon 1 of 3) 5' UTR (NM_001316978, exon 1 of 3) 572 NM_032792 84878 Hs.515662 NM_032792 ENSG00000119574 ZBTB45 ZNF499 zinc finger and BTB domain containing 45 protein-coding chr2-2075 chr2 216561022 216561232 + 15.9 0.000 Intergenic FLAM_C|SINE|Alu 45811 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr12-1529 chr12 80189250 80189460 + 15.9 0.000 5' UTR (NM_001368062, exon 6 of 63) 5' UTR (NM_001368062, exon 6 of 63) -20098 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr8-937 chr8 42535124 42535334 + 15.9 0.000 intron (NM_006749, intron 1 of 10) intron (NM_006749, intron 1 of 10) -5919 NM_001135676 114926 Hs.655320 NM_138436 ENSG00000176209 SMIM19 C8orf40 small integral membrane protein 19 protein-coding chr15-2091 chr15 65859922 65860132 + 15.9 0.000 Intergenic Intergenic -9464 NM_004663 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr8-1215 chr8 100937687 100937897 + 15.9 0.000 intron (NM_001135700, intron 2 of 5) intron (NM_001135700, intron 2 of 5) 12779 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr1-2312 chr1 67748795 67749005 + 15.9 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 63699 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr1-3243 chr1 201296150 201296360 + 15.9 0.000 intron (NM_001005337, intron 2 of 13) intron (NM_001005337, intron 2 of 13) 12749 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr12-2002 chr12 5566198 5566408 + 15.9 0.000 intron (NM_001278596, intron 24 of 25) intron (NM_001278596, intron 24 of 25) 72171 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr3-4068 chr3 86982896 86983106 + 15.9 0.000 intron (NM_001320493, intron 1 of 3) intron (NM_001320493, intron 1 of 3) 8148 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr2-3310 chr2 126991036 126991246 + 15.9 0.000 Intergenic MER34A|LTR|ERV1 90924 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr12-1794 chr12 123614569 123614779 + 15.9 0.000 intron (NR_135104, intron 8 of 13) intron (NR_135104, intron 8 of 13) -2036 NR_145743 109616977 NR_145743 ENSG00000206897 SNORA9B - small nucleolar RNA, H/ACA box 9B snoRNA chr14-726 chr14 72780844 72781054 + 15.9 0.000 intron (NM_001280542, intron 1 of 10) intron (NM_001280542, intron 1 of 10) 111700 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr11-1894 chr11 34644960 34645170 + 15.9 0.000 intron (NM_012153, intron 2 of 8) intron (NM_012153, intron 2 of 8) 12499 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr8-613 chr8 71843993 71844203 + 15.9 0.000 promoter-TSS (NR_033651) promoter-TSS (NR_033651) -18 NR_033651 100132891 Hs.137674 NR_033651 ENSG00000235531 MSC-AS1 - MSC antisense RNA 1 ncRNA chr4-1250 chr4 7195617 7195827 + 15.9 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 3184 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr1-701 chr1 226110164 226110374 + 15.9 0.000 Intergenic CpG 26694 NR_146920 105373113 Hs.149726 NR_146920 LINC01703 lncPARP1 long intergenic non-protein coding RNA 1703 ncRNA chr9-915 chr9 127443852 127444062 + 15.9 0.000 intron (NM_001322260, intron 5 of 5) intron (NM_001322260, intron 5 of 5) 4680 NR_002449 26783 Hs.408054 NR_002449 ENSG00000201302 SNORA65 RNU65|U65 small nucleolar RNA, H/ACA box 65 snoRNA chr17-1360 chr17 63151084 63151294 + 15.8 0.000 intron (NM_025185, intron 4 of 25) intron (NM_025185, intron 4 of 25) 184954 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr10-1608 chr10 60768936 60769146 + 15.8 0.000 Intergenic Intergenic -9290 NM_001170406 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr2-2158 chr2 216490128 216490338 + 15.8 0.000 Intergenic Intergenic -8611 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr15-1165 chr15 85094859 85095069 + 15.8 0.000 intron (NM_001243137, intron 8 of 21) intron (NM_001243137, intron 8 of 21) 112990 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr14-893 chr14 30525856 30526066 + 15.8 0.000 intron (NR_151720, intron 3 of 3) intron (NR_151720, intron 3 of 3) -33162 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr1-3013 chr1 227893907 227894117 + 15.8 0.000 Intergenic Intergenic 47671 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr16-1013 chr16 82655408 82655618 + 15.8 0.000 intron (NM_001220488, intron 2 of 14) L2c|LINE|L2 28544 NM_001220490 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr4-676 chr4 112284100 112284310 + 15.8 0.000 intron (NM_052864, intron 1 of 1) intron (NM_052864, intron 1 of 1) 1699 NM_052864 92610 Hs.310640 NM_052864 ENSG00000145365 TIFA T2BP|T6BP|TIFAA TRAF interacting protein with forkhead associated domain protein-coding chr1-2319 chr1 114716245 114716455 + 15.8 0.000 TTS (NM_001242892) TTS (NM_001242892) 421 NM_002524 4893 Hs.486502 NM_002524 ENSG00000213281 NRAS ALPS4|CMNS|N-ras|NCMS|NRAS1|NS6 NRAS proto-oncogene, GTPase protein-coding chr11-1529 chr11 122192907 122193117 + 15.8 0.000 intron (NR_137180, intron 2 of 4) L2c|LINE|L2 10097 NR_024430 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr7-1075 chr7 66238243 66238453 + 15.8 0.000 intron (NM_003596, intron 1 of 5) PABL_A|LTR|ERV1 33014 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr4-733 chr4 7358390 7358600 + 15.8 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 48045 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr10-968 chr10 80509757 80509967 + 15.8 0.000 intron (NM_030927, intron 5 of 8) intron (NM_030927, intron 5 of 8) 26080 NR_120661 101929574 Hs.593663 NR_120661 ENSG00000226659 LOC101929574 - uncharacterized LOC101929574 ncRNA chr8-1070 chr8 102686006 102686216 + 15.8 0.000 non-coding (NR_160672, exon 5 of 5) non-coding (NR_160672, exon 5 of 5) 29863 NR_160673 101927245 NR_160672 LOC101927245 - uncharacterized LOC101927245 ncRNA chr15-984 chr15 62779462 62779672 + 15.8 0.000 intron (NM_015059, intron 40 of 55) Charlie18a|DNA|hAT-Charlie -44390 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr3-2823 chr3 14195027 14195237 + 15.8 0.000 intron (NM_014463, intron 3 of 3) MLT1J2|LTR|ERVL-MaLR 16315 NM_014463 27258 Hs.111632 NM_014463 ENSG00000170860 LSM3 SMX4|USS2|YLR438C LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr12-1101 chr12 124174629 124174839 + 15.8 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -114430 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr10-2586 chr10 72764273 72764483 + 15.8 0.000 intron (NR_073062, intron 3 of 9) intron (NR_073062, intron 3 of 9) 43349 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr16-748 chr16 1437519 1437729 + 15.8 0.000 intron (NM_001143980, intron 11 of 16) intron (NM_001143980, intron 11 of 16) 6865 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr4-865 chr4 110165539 110165749 + 15.8 0.000 intron (NM_001130721, intron 2 of 4) MIRb|SINE|MIR 32971 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr15-1007 chr15 72473432 72473642 + 15.8 0.000 promoter-TSS (NM_005744) promoter-TSS (NM_005744) 702 NR_135678 105370888 Hs.540241 NR_135678 ENSG00000261423 TMEM202-AS1 - TMEM202 antisense RNA 1 ncRNA chr6-1235 chr6 141909761 141909971 + 15.8 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 178933 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr1-4103 chr1 232192913 232193123 + 15.8 0.000 Intergenic Intergenic 267184 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr15-985 chr15 63093681 63093891 + 15.8 0.000 Intergenic Intergenic -28075 NM_032857 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr2-3636 chr2 133813049 133813259 + 15.8 0.000 Intergenic Intergenic -244691 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr2-2718 chr2 75276615 75276825 + 15.8 0.000 Intergenic Intergenic -77200 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr1-2382 chr1 119779986 119780196 + 15.8 0.000 Intergenic Intergenic -11159 NM_005518 3158 Hs.59889 NM_005518 ENSG00000134240 HMGCS2 - 3-hydroxy-3-methylglutaryl-CoA synthase 2 protein-coding chr15-1267 chr15 85024687 85024897 + 15.8 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 42818 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr9-1411 chr9 121764933 121765143 + 15.8 0.000 intron (NM_032552, intron 8 of 16) intron (NM_032552, intron 8 of 16) 22253 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chrX-422 chrX 38817240 38817450 + 15.8 0.000 Intergenic (TCCC)n|Simple_repeat|Simple_repeat -13462 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr12-1130 chr12 75706132 75706342 + 15.8 0.000 Intergenic Intergenic -194628 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr2-1963 chr2 240468765 240468975 + 15.8 0.000 TTS (NM_002081) TTS (NM_002081) -12170 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr8-1156 chr8 19385884 19386094 + 15.8 0.000 intron (NM_001363110, intron 7 of 8) intron (NM_001363110, intron 7 of 8) 72013 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr16-2152 chr16 50697973 50698183 + 15.8 0.000 intron (NM_022162, intron 1 of 11) intron (NM_022162, intron 1 of 11) 1130 NM_022162 64127 Hs.592072 NM_022162 ENSG00000167207 NOD2 ACUG|BLAU|BLAUS|CARD15|CD|CLR16.3|IBD1|NLRC2|NOD2B|PSORAS1|YAOS nucleotide binding oligomerization domain containing 2 protein-coding chr9-1412 chr9 121984611 121984821 + 15.8 0.000 intron (NM_001139442, intron 4 of 8) intron (NM_001139442, intron 4 of 8) 108890 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr17-982 chr17 29930250 29930460 + 15.8 0.000 promoter-TSS (NM_001282129) promoter-TSS (NM_001282129) -127 NM_001282129 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr10-1890 chr10 110306227 110306437 + 15.8 0.000 Intergenic Intergenic -1412 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr13-849 chr13 99280246 99280456 + 15.8 0.000 intron (NR_026644, intron 4 of 8) intron (NR_026644, intron 4 of 8) -21923 NM_001098200 2841 Hs.741589 NM_005292 ENSG00000125245 GPR18 - G protein-coupled receptor 18 protein-coding chr1-3139 chr1 60972777 60972987 + 15.8 0.000 Intergenic Intergenic -2106 NR_110618 100996570 Hs.46616 NR_110617 ENSG00000237928 NFIA-AS2 - NFIA antisense RNA 2 ncRNA chr9-1063 chr9 123225424 123225634 + 15.8 0.000 intron (NR_033234, intron 1 of 18) MLT1N2|LTR|ERVL-MaLR 43057 NM_001171137 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr7-1135 chr7 35801097 35801307 + 15.8 0.000 promoter-TSS (NR_120512) promoter-TSS (NR_120512) -17 NM_001363715 989 Hs.191346 NM_001788 ENSG00000122545 SEPTIN7 CDC10|CDC3|NBLA02942|SEPT7|SEPT7A septin 7 protein-coding chr7-845 chr7 17123174 17123384 + 15.8 0.000 Intergenic L2c|LINE|L2 -175373 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr1-2373 chr1 84583572 84583782 + 15.8 0.000 Intergenic LTR9|LTR|ERV1 -9237 NM_004388 1486 Hs.513557 NM_004388 ENSG00000117151 CTBS CTB chitobiase protein-coding chr22-679 chr22 26550826 26551036 + 15.8 0.000 intron (NM_001362923, intron 1 of 7) intron (NM_001362923, intron 1 of 7) 4392 NR_031615 100313914 NR_031615 ENSG00000221760 MIR548J MIRN548J|hsa-mir-548j microRNA 548j ncRNA chr1-4220 chr1 151612686 151612896 + 15.8 0.000 intron (NM_030918, intron 1 of 11) intron (NM_030918, intron 1 of 11) 741 NM_030918 81609 Hs.192326 NM_030918 ENSG00000143376 SNX27 MRT1|MY014 sorting nexin 27 protein-coding chr2-2983 chr2 37586399 37586609 + 15.8 0.000 Intergenic Intergenic 85695 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr16-1166 chr16 75764197 75764407 + 15.8 0.000 Intergenic Intergenic -37812 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr15-1141 chr15 57079508 57079718 + 15.8 0.000 intron (NM_001322158, intron 5 of 20) intron (NM_001322158, intron 5 of 20) -139817 NM_001306220 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr5-876 chr5 180495022 180495232 + 15.8 0.000 intron (NR_163438, intron 1 of 10) CpG 748 NM_001370472 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding chr14-375 chr14 88554801 88555011 + 15.8 0.000 5' UTR (NM_007039, exon 1 of 19) 5' UTR (NM_007039, exon 1 of 19) 101 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr1-1431 chr1 55215675 55215885 + 15.8 0.000 promoter-TSS (NM_015306) promoter-TSS (NM_015306) 372 NR_038320 100507634 Hs.735428 NR_038320 LOC100507634 - uncharacterized LOC100507634 ncRNA chr8-1864 chr8 16621826 16622036 + 15.8 0.000 Intergenic MER57C2|LTR|ERV1 380414 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr1-2701 chr1 221040982 221041192 + 15.8 0.000 Intergenic Intergenic -160947 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr3-914 chr3 23567996 23568206 + 15.8 0.000 intron (NM_001370225, intron 5 of 5) intron (NM_001370225, intron 5 of 5) -237854 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr10-977 chr10 113788727 113788937 + 15.8 0.000 Intergenic Intergenic -10778 NR_039703 100616162 NR_039703 ENSG00000283656 MIR4483 - microRNA 4483 ncRNA chr2-5476 chr2 132478143 132478353 + 15.8 0.000 intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 44537 NR_162099 113218485 NR_162099 MIR9986 - microRNA 9986 ncRNA chr14-1211 chr14 77708005 77708215 + 15.8 0.000 promoter-TSS (NM_001267864) promoter-TSS (NM_001267864) 7 NR_052025 81892 Hs.655105 NM_031210 ENSG00000119705 SLIRP C14orf156|DC50|PD04872 SRA stem-loop interacting RNA binding protein protein-coding chr9-2741 chr9 96453710 96453920 + 15.8 0.000 intron (NM_014282, intron 1 of 7) intron (NM_014282, intron 1 of 7) 3646 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr12-1602 chr12 48176093 48176303 + 15.8 0.000 Intergenic Intergenic -7446 NM_001013635 387856 Hs.251699 NM_001013635 ENSG00000177875 CCDC184 C12orf68 coiled-coil domain containing 184 protein-coding chr16-2835 chr16 81313728 81313938 + 15.8 0.000 Intergenic Intergenic -1133 NM_022041 8139 Hs.112569 NM_022041 ENSG00000261609 GAN GAN1|KLHL16 gigaxonin protein-coding chr22-733 chr22 41272082 41272292 + 15.8 0.000 intron (NM_001317930, intron 3 of 15) intron (NM_001317930, intron 3 of 15) 14000 NM_002883 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr1-2978 chr1 162676141 162676351 + 15.8 0.000 intron (NM_006182, intron 2 of 17) intron (NM_006182, intron 2 of 17) 43782 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr16-1865 chr16 79607685 79607895 + 15.8 0.000 Intergenic L3|LINE|CR1 -7053 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr10-798 chr10 132745636 132745846 + 15.8 0.000 intron (NM_005539, intron 9 of 15) intron (NM_005539, intron 9 of 15) 40406 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr16-1742 chr16 75403061 75403271 + 15.8 0.000 intron (NM_006324, intron 4 of 6) intron (NM_006324, intron 4 of 6) 30337 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr6-1499 chr6 142944639 142944849 + 15.8 0.000 intron (NM_006734, intron 1 of 9) CpG 432 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr6-848 chr6 4280811 4281021 + 15.8 0.000 Intergenic Intergenic -90887 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr15-1325 chr15 84819289 84819499 + 15.8 0.000 intron (NM_020778, intron 1 of 13) intron (NM_020778, intron 1 of 13) 2714 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 CMH27|MAK|MIDORI alpha kinase 3 protein-coding chr2-2416 chr2 32330147 32330357 + 15.8 0.000 Intergenic Intergenic -26776 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr11-2502 chr11 67403423 67403633 + 15.8 0.000 promoter-TSS (NM_001256508) promoter-TSS (NM_001256508) -385 NM_001256508 374403 Hs.534648 NM_198517 ENSG00000175463 TBC1D10C CARABIN|EPI64C TBC1 domain family member 10C protein-coding chr11-1386 chr11 134120962 134121172 + 15.8 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 30296 NR_145790 109623486 NR_145790 SNORD153 - small nucleolar RNA, C/D box 153 snoRNA chr2-1949 chr2 231102756 231102966 + 15.8 0.000 intron (NM_001191037, intron 16 of 23) intron (NM_001191037, intron 16 of 23) 22181 NM_000867 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chr1-1357 chr1 26169816 26170026 + 15.8 0.000 promoter-TSS (NM_015871) promoter-TSS (NM_015871) 13 NM_015871 51042 Hs.477273 NM_015871 ENSG00000142684 ZNF593 ZT86 zinc finger protein 593 protein-coding chr12-684 chr12 76031482 76031692 + 15.8 0.000 exon (NM_007350, exon 1 of 2) exon (NM_007350, exon 1 of 2) 189 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr13-821 chr13 33723945 33724155 + 15.8 0.000 Intergenic Intergenic -47256 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr2-2905 chr2 224712391 224712601 + 15.8 0.000 Intergenic Intergenic -127099 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr13-383 chr13 114280610 114280820 + 15.8 0.000 promoter-TSS (NM_023011) promoter-TSS (NM_023011) -886 NR_148482 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3A regulator of nonsense mediated mRNA decay protein-coding chr3-1385 chr3 69084834 69085044 + 15.8 0.000 promoter-TSS (NM_006407) promoter-TSS (NM_006407) 2 NM_006407 10550 Hs.518060 NM_006407 ENSG00000144746 ARL6IP5 DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx ADP ribosylation factor like GTPase 6 interacting protein 5 protein-coding chr9-978 chr9 130034529 130034739 + 15.8 0.000 intron (NM_001363755, intron 1 of 15) intron (NM_001363755, intron 1 of 15) 8555 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr6-3050 chr6 63640282 63640492 + 15.8 0.000 intron (NM_001290260, intron 1 of 3) MIRb|SINE|MIR 3906 NM_001290260 23469 Hs.348921 NM_015153 ENSG00000118482 PHF3 - PHD finger protein 3 protein-coding chr16-729 chr16 85277543 85277753 + 15.8 0.000 Intergenic Intergenic -5310 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr10-3480 chr10 64949422 64949632 + 15.8 0.000 Intergenic L1PB1|LINE|L1 -25009 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA chr5-1322 chr5 116492144 116492354 + 15.8 0.000 intron (NM_001300780, intron 6 of 19) intron (NM_001300780, intron 6 of 19) 44751 NR_109879 101927233 Hs.732850 NR_109879 ENSG00000248445 SEMA6A-AS1 CTB-118N6.3 SEMA6A antisense RNA 1 ncRNA chr15-721 chr15 57476595 57476805 + 15.8 0.000 intron (NM_032866, intron 8 of 18) intron (NM_032866, intron 8 of 18) 100195 NM_001252335 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr7-2011 chr7 41580127 41580337 + 15.8 0.000 Intergenic Intergenic -113687 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr10-1076 chr10 3825312 3825522 + 15.8 0.000 Intergenic Intergenic -8533 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr1-2079 chr1 41835623 41835833 + 15.8 0.000 intron (NM_024503, intron 1 of 8) MER5A|DNA|hAT-Charlie 83194 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr1-5365 chr1 241518464 241518674 + 15.8 0.000 intron (NM_000143, intron 1 of 9) intron (NM_000143, intron 1 of 9) 1216 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1 fumarate hydratase protein-coding chr1-3119 chr1 44085410 44085620 + 15.8 0.000 Intergenic AluJr|SINE|Alu -33306 NM_173484 128209 Hs.567674 NM_173484 ENSG00000171872 KLF17 ZNF393|Zfp393 Kruppel like factor 17 protein-coding chr17-2641 chr17 12775728 12775938 + 15.8 0.000 intron (NR_104607, intron 1 of 1) intron (NR_104607, intron 1 of 1) -13665 NM_001321164 9912 Hs.499758 NM_014859 ENSG00000006740 ARHGAP44 NPC-A-10|RICH2 Rho GTPase activating protein 44 protein-coding chr6-656 chr6 42877058 42877268 + 15.8 0.000 Intergenic Intergenic -2453 NR_134563 285855 Hs.520133 NM_198486 ENSG00000146223 RPL7L1 dJ475N16.4 ribosomal protein L7 like 1 protein-coding chr2-1806 chr2 46171699 46171909 + 15.8 0.000 intron (NM_005400, intron 14 of 14) intron (NM_005400, intron 14 of 14) -125603 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr9-1997 chr9 127242441 127242651 + 15.8 0.000 Intergenic Intergenic -21116 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr20-579 chr20 49758947 49759157 + 15.8 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -45174 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr3-2839 chr3 25037437 25037647 + 15.8 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 208219 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr7-736 chr7 64463663 64463873 + 15.8 0.000 Intergenic Intergenic 30075 NR_029404 649395 Hs.728871 NR_029404 YWHAEP1 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1 pseudo chr8-1518 chr8 76955153 76955363 + 15.8 0.000 Intergenic Intergenic 11592 NR_130460 100422921 NR_130460 ENSG00000266712 MIR3149 - microRNA 3149 ncRNA chr12-959 chr12 116383302 116383512 + 15.8 0.000 Intergenic Intergenic 44911 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr2-3322 chr2 152421549 152421759 + 15.8 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 86480 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chrX-145 chrX 76427666 76427876 + 15.8 0.000 promoter-TSS (NM_020932) promoter-TSS (NM_020932) 61 NM_020932 57692 Hs.8453 NM_020932 ENSG00000198934 MAGEE1 DAMAGE|HCA1 MAGE family member E1 protein-coding chr2-2996 chr2 45851622 45851832 + 15.8 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 200052 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr18-928 chr18 71092316 71092526 + 15.8 0.000 Intergenic L1PA7|LINE|L1 -441467 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr1-6173 chr1 200981388 200981598 + 15.8 0.000 intron (NM_001252103, intron 27 of 33) intron (NM_001252103, intron 27 of 33) 42221 NM_001252102 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr3-2988 chr3 88701362 88701572 + 15.8 0.000 Intergenic L1PA15|LINE|L1 363011 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr8-1207 chr8 92698709 92698919 + 15.8 0.000 Intergenic L2c|LINE|L2 -43320 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr8-1940 chr8 49065648 49065858 + 15.8 0.000 intron (NM_001256596, intron 1 of 4) intron (NM_001256596, intron 1 of 4) -6591 NM_001256598 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr13-1567 chr13 33813359 33813569 + 15.8 0.000 Intergenic HAL1|LINE|L1 -4605 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr2-620 chr2 70258053 70258263 + 15.8 0.000 promoter-TSS (NM_016297) promoter-TSS (NM_016297) 21 NM_016297 51449 Hs.567502 NM_016297 ENSG00000116005 PCYOX1 PCL1 prenylcysteine oxidase 1 protein-coding chr16-1076 chr16 56824366 56824576 + 15.8 0.000 intron (NM_014669, intron 8 of 21) intron (NM_014669, intron 8 of 21) -34047 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr3-1812 chr3 48694722 48694932 + 15.8 0.000 3' UTR (NM_001190317, exon 3 of 3) 3' UTR (NM_001190317, exon 3 of 3) -8912 NM_184231 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr1-7931 chr1 168396936 168397146 + 15.8 0.000 Intergenic Intergenic 21517 NR_030284 693142 NR_030284 ENSG00000207974 MIR557 MIRN557|hsa-mir-557 microRNA 557 ncRNA chr3-1161 chr3 123734194 123734404 + 15.8 0.000 intron (NM_001321309, intron 8 of 32) intron (NM_001321309, intron 8 of 32) 44655 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr20-1207 chr20 14700867 14701077 + 15.8 0.000 intron (NM_001351663, intron 5 of 17) intron (NM_001351663, intron 5 of 17) 146588 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA chr6-1341 chr6 36235493 36235703 + 15.8 0.000 Intergenic Intergenic -7570 NM_173676 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr7-1278 chr7 139774550 139774760 + 15.8 0.000 intron (NM_001113239, intron 1 of 14) intron (NM_001113239, intron 1 of 14) 3343 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr17-2051 chr17 57092270 57092480 + 15.8 0.000 intron (NM_001370423, intron 2 of 11) intron (NM_001370423, intron 2 of 11) -3114 NM_001370427 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chrX-410 chrX 103656756 103656966 + 15.8 0.000 Intergenic MER66-int|LTR|ERV1 27886 NM_001006639 9338 Hs.95243 NM_004780 ENSG00000172465 TCEAL1 SIIR|WEX9|p21|pp21 transcription elongation factor A like 1 protein-coding chr3-1816 chr3 49794485 49794695 + 15.8 0.000 intron (NM_001007540, intron 10 of 18) intron (NM_001007540, intron 10 of 18) 5283 NM_001007540 389118 Hs.363312 NM_001007540 ENSG00000187492 CDHR4 CDH29|PRO34300 cadherin related family member 4 protein-coding chr20-1999 chr20 50085808 50086018 + 15.8 0.000 intron (NM_022442, intron 2 of 3) L2|LINE|L2 27237 NM_001282577 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr17-2279 chr17 29645719 29645929 + 15.8 0.000 intron (NM_033389, intron 13 of 14) intron (NM_033389, intron 13 of 14) -24401 NM_032854 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chr8-1443 chr8 133835570 133835780 + 15.8 0.000 Intergenic Intergenic -50821 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr11-1599 chr11 33778738 33778948 + 15.8 0.000 Intergenic Intergenic 4144 NR_120550 101928440 Hs.202343 NR_120550 ENSG00000254508 FBXO3-DT FBXO3-AS1 FBXO3 divergent transcript ncRNA chr6-1131 chr6 149012027 149012237 + 15.8 0.000 intron (NM_005715, intron 5 of 7) intron (NM_005715, intron 5 of 7) 20529 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr2-2492 chr2 149562329 149562539 + 15.8 0.000 Intergenic Intergenic -24924 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr15-613 chr15 89430667 89430877 + 15.8 0.000 Intergenic L2c|LINE|L2 30601 NR_160724 105371031 NR_160724 LOC105371031 - uncharacterized LOC105371031 ncRNA chr10-1751 chr10 14040328 14040538 + 15.8 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -31883 NM_001318336 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr19-917 chr19 51571229 51571439 + 15.8 0.000 promoter-TSS (NR_136208) promoter-TSS (NR_136208) 51 NR_136208 7728 Hs.119014 NM_007147 ENSG00000105497 ZNF175 OTK18 zinc finger protein 175 protein-coding chr1-2229 chr1 156572503 156572713 + 15.8 0.000 promoter-TSS (NM_178229) promoter-TSS (NM_178229) -43 NM_178229 128239 Hs.591495 NM_178229 ENSG00000183856 IQGAP3 - IQ motif containing GTPase activating protein 3 protein-coding chr19-1774 chr19 19021251 19021461 + 15.8 0.000 intron (NR_147915, intron 3 of 11) intron (NR_147915, intron 3 of 11) 12161 NR_147913 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chrX-445 chrX 84168196 84168406 + 15.8 0.000 intron (NM_014496, intron 1 of 21) L2c|LINE|L2 19634 NM_001330512 27330 Hs.234478 NM_014496 ENSG00000072133 RPS6KA6 PP90RSK4|RSK-4|RSK4|S6K-alpha-6|p90RSK6 ribosomal protein S6 kinase A6 protein-coding chr10-1730 chr10 103895567 103895777 + 15.8 0.000 intron (NM_024928, intron 7 of 9) intron (NM_024928, intron 7 of 9) 22512 NM_024928 79991 Hs.62314 NM_024928 ENSG00000107960 STN1 AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2 STN1 subunit of CST complex protein-coding chr22-670 chr22 49854570 49854780 + 15.8 0.000 intron (NM_014838, intron 1 of 1) intron (NM_014838, intron 1 of 1) 831 NM_014838 9889 Hs.475208 NM_014838 ENSG00000100426 ZBED4 - zinc finger BED-type containing 4 protein-coding chr2-1708 chr2 195561217 195561427 + 15.8 0.000 Intergenic L2c|LINE|L2 -95636 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr14-1200 chr14 73568360 73568570 + 15.8 0.000 promoter-TSS (NM_001364178) promoter-TSS (NM_001364178) -594 NM_006821 10965 Hs.446685 NM_006821 ENSG00000119673 ACOT2 CTE-IA|CTE1A|MTE1|PTE2|PTE2A|ZAP128 acyl-CoA thioesterase 2 protein-coding chr9-1575 chr9 72384081 72384291 + 15.8 0.000 Intergenic Intergenic -18978 NM_001102420 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr6-314 chr6 75749135 75749345 + 15.8 0.000 promoter-TSS (NM_001368866) promoter-TSS (NM_001368866) 1 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr3-3589 chr3 60153810 60154020 + 15.8 0.000 intron (NM_001320900, intron 6 of 9) L2c|LINE|L2 -73006 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr19-1027 chr19 632708 632918 + 15.8 0.000 intron (NM_005035, intron 2 of 20) CpG 724 NM_005035 5442 Hs.254113 NM_005035 ENSG00000099821 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL RNA polymerase mitochondrial protein-coding chr9-1113 chr9 16580055 16580265 + 15.8 0.000 intron (NM_001317939, intron 3 of 6) intron (NM_001317939, intron 3 of 6) -146654 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr8-711 chr8 144535487 144535697 + 15.8 0.000 intron (NM_001308208, intron 6 of 10) intron (NM_001308208, intron 6 of 10) -6481 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr7-1667 chr7 102916994 102917204 + 15.8 0.000 intron (NR_105043, intron 11 of 20) intron (NR_105043, intron 11 of 20) 4099 NM_005824 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr4-1264 chr4 26197609 26197819 + 15.8 0.000 Intergenic Intergenic -121996 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr19-1225 chr19 13102822 13103032 + 15.8 0.000 promoter-TSS (NM_005583) promoter-TSS (NM_005583) -69 NM_005583 4066 Hs.46446 NM_005583 ENSG00000104903 LYL1 bHLHa18 LYL1 basic helix-loop-helix family member protein-coding chr19-928 chr19 7888501 7888711 + 15.8 0.000 promoter-TSS (NM_025061) promoter-TSS (NM_025061) 96 NM_001268285 80131 Hs.501511 NM_025061 ENSG00000171017 LRRC8E - leucine rich repeat containing 8 VRAC subunit E protein-coding chr14-922 chr14 100328457 100328667 + 15.8 0.000 intron (NM_207117, intron 4 of 5) intron (NM_207117, intron 4 of 5) 5223 NM_207117 283600 Hs.108268 NM_207117 ENSG00000140107 SLC25A47 C14orf68|HDMCP|HMFN1655 solute carrier family 25 member 47 protein-coding chr2-3862 chr2 37000295 37000505 + 15.8 0.000 intron (NM_019024, intron 33 of 35) intron (NM_019024, intron 33 of 35) -33864 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr7-1179 chr7 30678968 30679178 + 15.8 0.000 intron (NM_001202481, intron 4 of 13) L2c|LINE|L2 3383 NM_001883 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding GL000225.1-5 GL000225.1 58733 58943 + 15.8 0.000 NA NA NA NA chr2-2383 chr2 9087098 9087308 + 15.8 0.000 Intergenic Intergenic -83519 NM_001321267 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr22-391 chr22 29388566 29388776 + 15.8 0.000 promoter-TSS (NM_145730) promoter-TSS (NM_145730) -88 NM_145730 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr5-548 chr5 14204965 14205175 + 15.8 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 61728 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr6-1798 chr6 125208157 125208367 + 15.8 0.000 intron (NM_001318907, intron 1 of 4) intron (NM_001318907, intron 1 of 4) 4551 NM_001318907 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr6-1332 chr6 26336399 26336609 + 15.8 0.000 Intergenic MER90|LTR|ERV1 -28655 NM_001197248 11118 Hs.376046 NM_007047 ENSG00000186470 BTN3A2 BT3.2|BTF4|BTN3.2|CD277 butyrophilin subfamily 3 member A2 protein-coding chr6-1754 chr6 54282212 54282422 + 15.8 0.000 Intergenic HAL1M8|LINE|L1 -26124 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr1-970 chr1 32612263 32612473 + 15.8 0.000 Intergenic Intergenic 38182 NM_001366278 339487 Hs.655921 NM_178547 ENSG00000176261 ZBTB8OS ARCH|ARCH2 zinc finger and BTB domain containing 8 opposite strand protein-coding chr14-1600 chr14 96357287 96357497 + 15.8 0.000 intron (NM_018036, intron 1 of 41) L2b|LINE|L2 5949 NM_018036 55102 Hs.168241 NM_018036 ENSG00000066739 ATG2B C14orf103 autophagy related 2B protein-coding chr3-991 chr3 27166967 27167177 + 15.8 0.000 intron (NM_001304384, intron 8 of 16) intron (NM_001304384, intron 8 of 16) 49451 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr13-515 chr13 33014443 33014653 + 15.8 0.000 Intergenic Intergenic -1875 NM_004795 9365 Hs.524953 NM_004795 ENSG00000133116 KL HFTC3 klotho protein-coding chr3-1065 chr3 51975058 51975268 + 15.8 0.000 promoter-TSS (NM_032750) promoter-TSS (NM_032750) 99 NM_015407 25864 Hs.534400 NM_015407 ENSG00000248487 ABHD14A DORZ1 abhydrolase domain containing 14A protein-coding chr17-2668 chr17 31919920 31920130 + 15.8 0.000 Intergenic HAL1|LINE|L1 -16982 NM_001321207 23512 Hs.462732 NM_015355 ENSG00000178691 SUZ12 CHET9|JJAZ1 SUZ12 polycomb repressive complex 2 subunit protein-coding chr1-1424 chr1 38064395 38064605 + 15.8 0.000 Intergenic LTR16|LTR|ERVL -17707 NM_002699 5453 Hs.1837 NM_002699 ENSG00000185668 POU3F1 OCT6|OTF6|SCIP POU class 3 homeobox 1 protein-coding chr7-2535 chr7 69728296 69728506 + 15.8 0.000 intron (NM_015570, intron 1 of 18) intron (NM_015570, intron 1 of 18) 129926 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr1-4465 chr1 8970432 8970642 + 15.8 0.000 intron (NM_001270501, intron 5 of 6) AluSz|SINE|Alu 24669 NM_001215 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr1-3210 chr1 162899725 162899935 + 15.8 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -31015 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr13-1257 chr13 103140358 103140568 + 15.8 0.000 Intergenic Intergenic -74046 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr6-940 chr6 122471660 122471870 + 15.8 0.000 promoter-TSS (NM_001270394) promoter-TSS (NM_001270394) 42 NM_020755 57515 Hs.146668 NM_020755 ENSG00000111897 SERINC1 TDE1L|TDE2|TMS-2|TMS2 serine incorporator 1 protein-coding chr20-777 chr20 49246481 49246691 + 15.8 0.000 3' UTR (NM_021035, exon 14 of 14) 3' UTR (NM_021035, exon 14 of 14) 27291 NM_017895 55661 Hs.65234 NM_017895 ENSG00000124228 DDX27 DRS1|Drs1p|HSPC259|PP3241|RHLP|dJ686N3.1 DEAD-box helicase 27 protein-coding chr9-471 chr9 99105520 99105730 + 15.8 0.000 intron (NM_004612, intron 1 of 8) CpG 512 NM_001130916 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr14-1971 chr14 36997983 36998193 + 15.8 0.000 intron (NM_001171170, intron 1 of 10) MER103C|DNA|hAT-Charlie -45697 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr9-1591 chr9 96246850 96247060 + 15.8 0.000 intron (NR_146524, intron 1 of 2) intron (NR_146524, intron 1 of 2) 492 NR_146524 105376162 Hs.662614 NR_146524 ENSG00000232283 HSD17B3-AS1 - HSD17B3 antisense RNA 1 ncRNA chr1-3732 chr1 232142571 232142781 + 15.8 0.000 Intergenic Intergenic 216842 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr6-1602 chr6 40388072 40388282 + 15.8 0.000 Intergenic Intergenic 9840 NR_160958 732253 Hs.180197 NM_001359094 TDRG1 LINC00532|lincRNA-NR_024015 testis development related 1 ncRNA chr7-2483 chr7 5237401 5237611 + 15.8 0.000 Intergenic Intergenic 23237 NM_001033520 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr17-1106 chr17 80649729 80649939 + 15.8 0.000 intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 104996 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr16-1195 chr16 23453039 23453249 + 15.8 0.000 promoter-TSS (NM_153603) promoter-TSS (NM_153603) 45 NM_153603 91949 Hs.185807 NM_153603 ENSG00000168434 COG7 CDG2E component of oligomeric golgi complex 7 protein-coding chr7-877 chr7 121396196 121396406 + 15.8 0.000 promoter-TSS (NM_014888) promoter-TSS (NM_014888) 7 NM_014888 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chrX-428 chrX 44244117 44244327 + 15.8 0.000 intron (NM_025184, intron 7 of 14) intron (NM_025184, intron 7 of 14) 99450 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr3-4032 chr3 69686929 69687139 + 15.8 0.000 Intergenic Intergenic -52430 NM_001354606 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr1-2049 chr1 979556 979766 + 15.8 0.000 exon (NM_001291367, exon 3 of 5) exon (NM_001291367, exon 3 of 5) 1512 NM_001369898 84808 Hs.271462 NM_032722 ENSG00000187642 PERM1 C1orf170 PPARGC1 and ESRR induced regulator, muscle 1 protein-coding chr5-1455 chr5 50709587 50709797 + 15.8 0.000 intron (NM_024615, intron 2 of 25) intron (NM_024615, intron 2 of 25) 42278 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr20-291 chr20 36544201 36544411 + 15.8 0.000 intron (NM_006097, intron 1 of 3) intron (NM_006097, intron 1 of 3) 2787 NM_006097 10398 Hs.504687 NM_006097 ENSG00000101335 MYL9 LC20|MLC-2C|MLC2|MRLC1|MYRL2 myosin light chain 9 protein-coding chr15-617 chr15 40249695 40249905 + 15.8 0.000 TTS (NM_001039905) TTS (NM_001039905) 3109 NM_001039905 644809 Hs.631718 NM_001039905 C15orf56 - chromosome 15 open reading frame 56 protein-coding chr16-2213 chr16 86086878 86087088 + 15.8 0.000 Intergenic Intergenic -109198 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr11-1605 chr11 36024015 36024225 + 15.8 0.000 intron (NM_001304264, intron 1 of 5) intron (NM_001304264, intron 1 of 5) 14022 NR_039769 100616311 NR_039769 ENSG00000263389 MIR3973 - microRNA 3973 ncRNA chr4-2156 chr4 87189034 87189244 + 15.8 0.000 intron (NM_020803, intron 2 of 9) MER57B2|LTR|ERV1 31129 NM_001292003 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chrX-766 chrX 24959988 24960198 + 15.8 0.000 intron (NM_016937, intron 36 of 36) intron (NM_016937, intron 36 of 36) 55872 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr1-2390 chr1 161738846 161739056 + 15.8 0.000 Intergenic L3|LINE|CR1 -10835 NM_007240 11266 Hs.416216 NM_007240 ENSG00000081721 DUSP12 DUSP1|YVH1 dual specificity phosphatase 12 protein-coding chr19-836 chr19 17309267 17309477 + 15.8 0.000 promoter-TSS (NM_024050) promoter-TSS (NM_024050) -191 NM_024050 79016 Hs.466154 NM_024050 ENSG00000130311 DDA1 C19orf58|PCIA1 DET1 and DDB1 associated 1 protein-coding chr6-1084 chr6 54192988 54193198 + 15.8 0.000 intron (NM_001281746, intron 10 of 11) intron (NM_001281746, intron 10 of 11) 81650 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr2-2195 chr2 46043232 46043442 + 15.8 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -254070 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr2-1072 chr2 25877543 25877753 + 15.8 0.000 intron (NM_018263, intron 1 of 11) CpG 839 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr15-400 chr15 68187140 68187350 + 15.8 0.000 intron (NM_016166, intron 13 of 13) intron (NM_016166, intron 13 of 13) 18865 NM_001031733 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr4-698 chr4 47623986 47624196 + 15.8 0.000 intron (NM_006587, intron 17 of 21) intron (NM_006587, intron 17 of 21) -28578 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA chr1-5175 chr1 169926133 169926343 + 15.8 0.000 intron (NM_014970, intron 19 of 19) L3|LINE|CR1 -32279 NM_181093 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr15-1554 chr15 68489538 68489748 + 15.8 0.000 Intergenic Intergenic -28730 NM_001324014 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr12-1216 chr12 185866 186076 + 15.8 0.000 Intergenic Intergenic -17674 NR_120475 101929384 Hs.569138 NR_120475 ENSG00000256577 LOC101929384 - uncharacterized LOC101929384 ncRNA chr2-1320 chr2 61620724 61620934 + 15.8 0.000 Intergenic MLT1G-int|LTR|ERVL-MaLR -82473 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr19-1267 chr19 11143241 11143451 + 15.8 0.000 Intergenic Intergenic 12436 NM_001317033 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr2-3405 chr2 43313300 43313510 + 15.8 0.000 intron (NM_001083953, intron 31 of 37) intron (NM_001083953, intron 31 of 37) 86194 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr10-721 chr10 113679828 113680038 + 15.8 0.000 promoter-TSS (NM_033339) promoter-TSS (NM_033339) 21 NM_033339 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding chr9-4082 chr9 126587293 126587503 + 15.8 0.000 Intergenic MIR|SINE|MIR -27045 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr18-825 chr18 8623490 8623700 + 15.8 0.000 intron (NM_001025300, intron 1 of 5) intron (NM_001025300, intron 1 of 5) 14150 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr1-3645 chr1 64733705 64733915 + 15.8 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -11163 NM_001366165 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding GL000225.1-16 GL000225.1 26273 26483 + 15.8 0.000 NA NA NA NA chr7-2628 chr7 1494662 1494872 + 15.8 0.000 intron (NM_001080453, intron 14 of 47) (GCCCCGCA)n|Simple_repeat|Simple_repeat 9622 NM_001080453 26173 Hs.532188 NM_001080453 ENSG00000164880 INTS1 INT1|NET28 integrator complex subunit 1 protein-coding chr17-1175 chr17 43388447 43388657 + 15.8 0.000 non-coding (NR_027412, exon 1 of 6) non-coding (NR_027412, exon 1 of 6) 346 NR_027413 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chr12-2387 chr12 27207730 27207940 + 15.8 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -36451 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr14-873 chr14 83217552 83217762 + 15.8 0.000 Intergenic L1M1|LINE|L1 575025 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr7-3845 chr7 101077542 101077752 + 15.8 0.000 Intergenic Intergenic -7834 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding chr2-1616 chr2 218259439 218259649 + 15.8 0.000 promoter-TSS (NM_001321950) promoter-TSS (NM_001321950) 48 NM_001321950 151306 Hs.160954 NM_170699 ENSG00000179921 GPBAR1 BG37|GPCR19|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding chr17-529 chr17 7835573 7835783 + 15.8 0.000 Intergenic CpG -4228 NM_001348716 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr6-2282 chr6 79628964 79629174 + 15.8 0.000 Intergenic MER58A|DNA|hAT-Charlie -2260 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chr2-5290 chr2 67394852 67395062 + 15.8 0.000 Intergenic AluJo|SINE|Alu -2376 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr3-2209 chr3 23575744 23575954 + 15.8 0.000 intron (NM_001370225, intron 5 of 5) L1ME3G|LINE|L1 -230106 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr12-692 chr12 131825329 131825539 + 15.8 0.000 Intergenic L1ME3G|LINE|L1 -2959 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr1-7297 chr1 242178324 242178534 + 15.8 0.000 intron (NM_001320272, intron 6 of 10) intron (NM_001320272, intron 6 of 10) -179331 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr11-583 chr11 17207982 17208192 + 15.8 0.000 promoter-TSS (NM_002645) promoter-TSS (NM_002645) -101 NM_002645 5286 Hs.175343 NM_002645 ENSG00000011405 PIK3C2A CPK|OCSKD|PI3-K-C2(ALPHA)|PI3-K-C2A|PI3K-C2-alpha|PI3K-C2alpha phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding chr1-2672 chr1 192401962 192402172 + 15.8 0.000 Intergenic Intergenic 85075 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr4-302 chr4 52038226 52038436 + 15.8 0.000 promoter-TSS (NM_000232) promoter-TSS (NM_000232) -12 NM_000232 6443 Hs.438953 NM_000232 ENSG00000163069 SGCB A3b|LGMD2E|LGMDR4|SGC sarcoglycan beta protein-coding chr15-1440 chr15 71962742 71962952 + 15.8 0.000 intron (NM_006901, intron 13 of 41) L2|LINE|L2 -151411 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr18-250 chr18 7568116 7568326 + 15.8 0.000 intron (NM_002845, intron 1 of 30) CpG 905 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr3-502 chr3 50311617 50311827 + 15.8 0.000 intron (NM_153281, intron 1 of 5) SVA_D|Retroposon|SVA 659 NM_153281 3373 Hs.75619 NM_033159 ENSG00000114378 HYAL1 HYAL-1|LUCA1|MPS9|NAT6 hyaluronidase 1 protein-coding chr1-2517 chr1 224447274 224447484 + 15.8 0.000 intron (NM_001322303, intron 1 of 5) MLT2B3|LTR|ERVL 12530 NR_136294 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr14-772 chr14 35414476 35414686 + 15.8 0.000 Intergenic Intergenic -9827 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr14-1110 chr14 73830123 73830333 + 15.8 0.000 promoter-TSS (NR_135238) promoter-TSS (NR_135238) -93 NR_135238 100506498 Hs.569330 NR_135238 ENSG00000258586 LINC02274 - long intergenic non-protein coding RNA 2274 ncRNA chr18-1308 chr18 68923852 68924062 + 15.8 0.000 intron (NM_001093729, intron 8 of 9) intron (NM_001093729, intron 8 of 9) 125877 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr3-1290 chr3 117903286 117903496 + 15.8 0.000 Intergenic Intergenic -212466 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr1-1460 chr1 22420586 22420796 + 15.8 0.000 Intergenic Intergenic -31160 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr11-3477 chr11 79396177 79396387 + 15.8 0.000 intron (NM_001098816, intron 1 of 33) intron (NM_001098816, intron 1 of 33) 5827 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr5-1271 chr5 126489608 126489818 + 15.8 0.000 intron (NM_001146321, intron 14 of 14) intron (NM_001146321, intron 14 of 14) 24563 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr17-1605 chr17 73027469 73027679 + 15.8 0.000 intron (NM_001352692, intron 4 of 9) intron (NM_001352692, intron 4 of 9) 65114 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr19-2512 chr19 15833474 15833684 + 15.8 0.000 intron (NR_015379, intron 2 of 2) HERVH-int|LTR|ERV1 4632 NR_015379 652995 Hs.644234 NR_015379 ENSG00000214049 UCA1 CUDR|LINC00178|NCRNA00178|UCAT1|onco-lncRNA-36 urothelial cancer associated 1 ncRNA chr3-2285 chr3 97835928 97836138 + 15.8 0.000 intron (NM_153605, intron 1 of 21) intron (NM_153605, intron 1 of 21) 14022 NM_153605 131544 Hs.733378 NM_153605 ENSG00000080200 CRYBG3 DKFZp667G2110|vlAKAP crystallin beta-gamma domain containing 3 protein-coding chr1-1763 chr1 3070097 3070307 + 15.8 0.000 intron (NM_022114, intron 1 of 16) CpG 999 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr13-861 chr13 112592768 112592978 + 15.8 0.000 Intergenic MER76|LTR|ERVL -4688 NM_001286279 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr12-662 chr12 105385267 105385477 + 15.8 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 54681 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr2-1744 chr2 37344801 37345011 + 15.8 0.000 intron (NM_012413, intron 1 of 6) CpG 276 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr9-1599 chr9 112097771 112097981 + 15.8 0.000 intron (NM_022486, intron 10 of 16) intron (NM_022486, intron 10 of 16) 77421 NM_001282643 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr2-4017 chr2 101113803 101114013 + 15.8 0.000 intron (NM_001102426, intron 1 of 19) intron (NM_001102426, intron 1 of 19) 37539 NR_138475 11138 Hs.442657 NM_007063 ENSG00000204634 TBC1D8 AD3|GRAMD8|HBLP1|TBC1D8A|VRP TBC1 domain family member 8 protein-coding chr2-2981 chr2 36732053 36732263 + 15.8 0.000 intron (NM_001177969, intron 3 of 14) intron (NM_001177969, intron 3 of 14) 35451 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr5-941 chr5 55063192 55063402 + 15.8 0.000 Intergenic Intergenic 39041 NM_002104 3003 Hs.277937 NM_002104 ENSG00000113088 GZMK TRYP2 granzyme K protein-coding chr1-2008 chr1 53592686 53592896 + 15.8 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 133392 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr15-716 chr15 50877110 50877320 + 15.8 0.000 Intergenic Intergenic -31468 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr2-3980 chr2 74609298 74609508 + 15.8 0.000 intron (NM_001321739, intron 3 of 10) L1MA6|LINE|L1 38634 NM_138804 130951 Hs.348645 NM_138804 ENSG00000159374 M1AP C2orf65|D6Mm5e|SPATA37 meiosis 1 associated protein protein-coding chr9-1572 chr9 34899694 34899904 + 15.8 0.000 Intergenic Intergenic -4035 NM_001309426 100129969 Hs.571602 NM_001309426 ENSG00000187791 FAM205C FAM205CP family with sequence similarity 205 member C protein-coding chr2-2500 chr2 158204612 158204822 + 15.8 0.000 intron (NM_138803, intron 11 of 13) MLT1G|LTR|ERVL-MaLR 38067 NR_038850 554201 Hs.570262 NR_038850 ENSG00000227480 CCDC148-AS1 - CCDC148 antisense RNA 1 ncRNA chr19-1483 chr19 11089154 11089364 + 15.8 0.000 promoter-TSS (NM_000527) promoter-TSS (NM_000527) -103 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr2-628 chr2 148645151 148645361 + 15.8 0.000 intron (NM_015630, intron 1 of 13) CpG 505 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr6-593 chr6 8064367 8064577 + 15.8 0.000 promoter-TSS (NM_201280) promoter-TSS (NM_201280) -58 NR_037616 100526836 Hs.150837 NR_037616 ENSG00000259040 BLOC1S5-TXNDC5 MUTED-TXNDC5 BLOC1S5-TXNDC5 readthrough (NMD candidate) ncRNA chr7-984 chr7 70016476 70016686 + 15.8 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 418106 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr11-1308 chr11 65047563 65047773 + 15.8 0.000 exon (NM_005468, exon 12 of 18) exon (NM_005468, exon 12 of 18) 6458 NM_013299 29901 Hs.23642 NM_013299 ENSG00000168061 SAC3D1 HSU79266|SHD1 SAC3 domain containing 1 protein-coding chr6-799 chr6 24428794 24429004 + 15.8 0.000 3' UTR (NM_001503, exon 25 of 25) 3' UTR (NM_001503, exon 25 of 25) 25963 NM_020662 57380 Hs.658612 NM_020662 ENSG00000124532 MRS2 HPT|MRS2L magnesium transporter MRS2 protein-coding chr5-1273 chr5 130400217 130400427 + 15.8 0.000 Intergenic MLT1H-int|LTR|ERVL-MaLR 495857 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr17-754 chr17 69327304 69327514 + 15.8 0.000 promoter-TSS (NM_172232) promoter-TSS (NM_172232) -276 NM_172232 23461 Hs.731824 NM_018672 ENSG00000154265 ABCA5 ABC13|EST90625|HTC3 ATP binding cassette subfamily A member 5 protein-coding chr22-1339 chr22 20904752 20904962 + 15.8 0.000 Intergenic Intergenic -12550 NR_156180 1399 Hs.5613 NM_005207 ENSG00000099942 CRKL - CRK like proto-oncogene, adaptor protein protein-coding chr10-1070 chr10 127278392 127278602 + 15.8 0.000 intron (NM_001290223, intron 29 of 51) intron (NM_001290223, intron 29 of 51) -81906 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr15-1170 chr15 98719009 98719219 + 15.8 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) -65312 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr6-1443 chr6 158632193 158632403 + 15.8 0.000 3' UTR (NM_020823, exon 17 of 17) 3' UTR (NM_020823, exon 17 of 17) 12445 NM_001291603 6993 Hs.445999 NM_006519 ENSG00000146425 DYNLT1 CW-1|TCTEL1|tctex-1 dynein light chain Tctex-type 1 protein-coding chr8-1272 chr8 143893299 143893509 + 15.8 0.000 Intergenic Intergenic -14940 NM_031308 83481 Hs.200412 NM_031308 ENSG00000261150 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding chr13-579 chr13 75135543 75135753 + 15.8 0.000 Intergenic LTR26|LTR|ERV1 104733 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr1-4972 chr1 54884041 54884251 + 15.8 0.000 intron (NM_014762, intron 1 of 8) MIRb|SINE|MIR 3049 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr7-1555 chr7 27611078 27611288 + 15.8 0.000 intron (NM_152740, intron 4 of 7) intron (NM_152740, intron 4 of 7) -4791 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr10-2011 chr10 63209055 63209265 + 15.8 0.000 exon (NM_001322252, exon 8 of 25) exon (NM_001322252, exon 8 of 25) 60063 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr10-918 chr10 100987334 100987544 + 15.8 0.000 promoter-TSS (NM_001163814) promoter-TSS (NM_001163814) 58 NM_176792 84545 Hs.421848 NM_032112 ENSG00000055950 MRPL43 L43mt|MRP-L43|bMRP36a mitochondrial ribosomal protein L43 protein-coding chr8-1360 chr8 119581557 119581767 + 15.8 0.000 intron (NR_045555, intron 7 of 13) LTR33|LTR|ERVL 11346 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr4-1569 chr4 3423297 3423507 + 15.8 0.000 intron (NM_002926, intron 12 of 16) intron (NM_002926, intron 12 of 16) -18566 NM_001528 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr11-1049 chr11 45983145 45983355 + 15.8 0.000 intron (NR_147890, intron 5 of 18) intron (NR_147890, intron 5 of 18) 60594 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr7-2216 chr7 117829151 117829361 + 15.8 0.000 intron (NM_001363351, intron 2 of 22) intron (NM_001363351, intron 2 of 22) 42964 NM_001363349 83992 Hs.592285 NM_033427 ENSG00000077063 CTTNBP2 C7orf8|CORTBP2|Orf4 cortactin binding protein 2 protein-coding chr14-874 chr14 85415400 85415610 + 15.8 0.000 intron (NR_102737, intron 2 of 2) L2a|LINE|L2 21590 NR_102738 100996280 Hs.135735 NR_102737 ENSG00000259107 LINC00911 - long intergenic non-protein coding RNA 911 ncRNA chr17-1264 chr17 47810334 47810544 + 15.8 0.000 intron (NM_145798, intron 18 of 22) intron (NM_145798, intron 18 of 22) 11355 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding chrX-698 chrX 65703831 65704041 + 15.8 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 36282 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr17-1447 chr17 38958309 38958519 + 15.8 0.000 intron (NM_001008777, intron 3 of 10) intron (NM_001008777, intron 3 of 10) 8989 NM_001008777 494188 Hs.549536 NM_001008777 ENSG00000204952 FBXO47 - F-box protein 47 protein-coding chr14-393 chr14 49892734 49892944 + 15.8 0.000 promoter-TSS (NM_001663) promoter-TSS (NM_001663) -243 NM_001663 382 Hs.525330 NM_001663 ENSG00000165527 ARF6 - ADP ribosylation factor 6 protein-coding chr6-1245 chr6 3088228 3088438 + 15.8 0.000 intron (NM_001354930, intron 6 of 10) L1MDa|LINE|L1 19839 NM_001354930 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 IMD57|RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr2-2765 chr2 220708648 220708858 + 15.8 0.000 Intergenic HAL1|LINE|L1 -802188 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr4-1734 chr4 7924262 7924472 + 15.8 0.000 intron (NM_001371091, intron 1 of 17) intron (NM_001371091, intron 1 of 17) -14634 NM_203423 389199 Hs.375210 NM_203423 LOC389199 - uncharacterized LOC389199 protein-coding chr3-3014 chr3 106972086 106972296 + 15.8 0.000 Intergenic Intergenic 268447 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr8-3175 chr8 99988687 99988897 + 15.8 0.000 intron (NM_015668, intron 20 of 27) L2c|LINE|L2 -15790 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr14-528 chr14 75259095 75259305 + 15.8 0.000 Intergenic CpG -19628 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chrX-402 chrX 65669081 65669291 + 15.8 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 1532 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr22-377 chr22 41367361 41367571 + 15.8 0.000 5' UTR (NM_001145398, exon 1 of 4) 5' UTR (NM_001145398, exon 1 of 4) 133 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr19-1786 chr19 48091524 48091734 + 15.8 0.000 intron (NM_001159323, intron 7 of 16) AluSz|SINE|Alu 19188 NM_003706 8605 Hs.631562 NM_003706 ENSG00000105499 PLA2G4C CPLA2-gamma phospholipase A2 group IVC protein-coding chr12-1249 chr12 42326830 42327040 + 15.8 0.000 promoter-TSS (NM_033114) promoter-TSS (NM_033114) 768 NM_001364831 51535 Hs.444157 NM_016488 ENSG00000134283 PPHLN1 CR|HSPC206|HSPC232 periphilin 1 protein-coding chr7-1456 chr7 84331928 84332138 + 15.8 0.000 Intergenic Intergenic -137244 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr4-1435 chr4 86048503 86048713 + 15.8 0.000 intron (NM_001363657, intron 11 of 13) intron (NM_001363657, intron 11 of 13) -71198 NR_110879 101929064 Hs.662221 NR_110879 ENSG00000250062 LOC101929064 - uncharacterized LOC101929064 ncRNA chr16-598 chr16 30997096 30997306 + 15.8 0.000 intron (NM_052874, intron 5 of 9) intron (NM_052874, intron 5 of 9) 11994 NM_001142778 80270 Hs.460618 NM_025193 ENSG00000099377 HSD3B7 CBAS1|PFIC4|SDR11E3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding chr2-2188 chr2 36489392 36489602 + 15.8 0.000 intron (NM_016441, intron 7 of 16) intron (NM_016441, intron 7 of 16) 108671 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr16-1262 chr16 31182516 31182726 + 15.8 0.000 exon (NM_001170634, exon 3 of 15) exon (NM_001170634, exon 3 of 15) 2511 NM_001170634 2521 Hs.46894 NM_004960 ENSG00000089280 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding chr12-844 chr12 120468713 120468923 + 15.8 0.000 intron (NM_003769, intron 1 of 3) intron (NM_003769, intron 1 of 3) 930 NM_003769 8683 Hs.706889 NM_003769 ENSG00000111786 SRSF9 SFRS9|SRp30c serine and arginine rich splicing factor 9 protein-coding chr9-1371 chr9 34253578 34253788 + 15.8 0.000 3' UTR (NM_194313, exon 13 of 13) 3' UTR (NM_194313, exon 13 of 13) 74640 NM_016525 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr9-2687 chr9 76562584 76562794 + 15.8 0.000 Intergenic Intergenic 62056 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr7-1793 chr7 82778046 82778256 + 15.8 0.000 intron (NM_033026, intron 22 of 24) L1PREC2|LINE|L1 -334195 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr3-1443 chr3 32220117 32220327 + 15.8 0.000 Intergenic Intergenic -18457 NM_001320308 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr1-1341 chr1 1890938 1891148 + 15.8 0.000 promoter-TSS (NM_002074) promoter-TSS (NM_002074) 44 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr5-1666 chr5 43049435 43049645 + 15.8 0.000 intron (NR_104651, intron 2 of 2) LTR61|LTR|ERV1 7406 NR_015447 153684 Hs.259625 NR_015447 ENSG00000215068 LOC153684 - uncharacterized LOC153684 ncRNA chr15-1508 chr15 51866921 51867131 + 15.8 0.000 intron (NM_014547, intron 2 of 9) L2b|LINE|L2 37373 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr17-1842 chr17 16080462 16080672 + 15.8 0.000 intron (NM_001190440, intron 23 of 44) intron (NM_001190440, intron 23 of 44) 72629 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr3-3084 chr3 135388269 135388479 + 15.8 0.000 Intergenic AluSz|SINE|Alu -577354 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr5-782 chr5 173472367 173472577 + 15.8 0.000 Intergenic Intergenic -107162 NR_027109 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr12-1184 chr12 69739607 69739817 + 15.8 0.000 non-coding (NR_103520, exon 1 of 9) non-coding (NR_103520, exon 1 of 9) 331 NR_103520 117177 Hs.258209 NM_022456 ENSG00000127328 RAB3IP RABIN3|RABIN8 RAB3A interacting protein protein-coding chr3-3758 chr3 7536597 7536807 + 15.8 0.000 intron (NM_000844, intron 7 of 9) MLT1F|LTR|ERVL-MaLR -1418 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr3-3088 chr3 136191741 136191951 + 15.8 0.000 intron (NM_018133, intron 1 of 1) intron (NM_018133, intron 1 of 1) 2622 NM_001145417 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr2-4181 chr2 189466780 189466990 + 15.8 0.000 intron (NM_001303096, intron 14 of 21) intron (NM_001303096, intron 14 of 21) 25411 NM_032168 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr16-1552 chr16 77717968 77718178 + 15.8 0.000 Intergenic SATR2|Satellite|Satellite -4419 NM_001243661 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr15-898 chr15 39860330 39860540 + 15.8 0.000 intron (NM_001271854, intron 1 of 3) intron (NM_001271854, intron 1 of 3) -31159 NM_001271855 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr11-1117 chr11 2306508 2306718 + 15.8 0.000 intron (NM_139022, intron 3 of 9) intron (NM_139022, intron 3 of 9) -3473 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr15-1345 chr15 46365571 46365781 + 15.8 0.000 Intergenic Intergenic 660481 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr15-385 chr15 75673575 75673785 + 15.8 0.000 TTS (NM_001897) TTS (NM_001897) 24673 NM_001318146 257364 Hs.8705 NM_153271 ENSG00000173548 SNX33 SH3PX3|SH3PXD3C|SNX30 sorting nexin 33 protein-coding chr3-1299 chr3 156605822 156606032 + 15.8 0.000 Intergenic Intergenic -50727 NM_007107 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr11-2648 chr11 48193969 48194179 + 15.8 0.000 Intergenic L1M4a2|LINE|L1 -22736 NM_001005470 119765 Hs.553566 NM_001005470 ENSG00000175619 OR4B1 OR11-106|OST208 olfactory receptor family 4 subfamily B member 1 protein-coding chr3-1615 chr3 27521488 27521698 + 15.8 0.000 Intergenic Intergenic -37209 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr11-2249 chr11 87173381 87173591 + 15.8 0.000 intron (NR_033149, intron 4 of 13) MIRb|SINE|MIR 135552 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr7-1362 chr7 96188608 96188818 + 15.8 0.000 intron (NM_001160210, intron 9 of 17) intron (NM_001160210, intron 9 of 17) 31043 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr3-2910 chr3 51099234 51099444 + 15.8 0.000 intron (NM_004947, intron 9 of 52) intron (NM_004947, intron 9 of 52) -285952 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr15-575 chr15 99213315 99213525 + 15.8 0.000 intron (NR_109947, intron 7 of 12) intron (NR_109947, intron 7 of 12) 36161 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding chr2-1092 chr2 3170618 3170828 + 15.7 0.000 Intergenic Intergenic -44697 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr3-1495 chr3 120170348 120170558 + 15.7 0.000 intron (NM_001168271, intron 8 of 8) intron (NM_001168271, intron 8 of 8) 73842 NM_153002 165829 Hs.333358 NM_153002 ENSG00000175697 GPR156 GABABL|PGR28 G protein-coupled receptor 156 protein-coding chr3-1717 chr3 73547980 73548190 + 15.7 0.000 intron (NR_121660, intron 1 of 1) intron (NR_121660, intron 1 of 1) 13495 NM_001303140 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr6-3253 chr6 148836148 148836358 + 15.7 0.000 intron (NM_005715, intron 1 of 7) intron (NM_005715, intron 1 of 7) 89223 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr5-2486 chr5 147233997 147234207 + 15.7 0.000 promoter-TSS (NM_145001) promoter-TSS (NM_145001) 757 NR_147190 105378217 Hs.162649 NR_147190 STK32A-AS1 - STK32A antisense RNA 1 ncRNA chr14-695 chr14 32593401 32593611 + 15.7 0.000 intron (NM_004274, intron 5 of 13) L3b|LINE|CR1 264208 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr7-3944 chr7 129865156 129865366 + 15.7 0.000 intron (NM_001202498, intron 3 of 6) intron (NM_001202498, intron 3 of 6) 87699 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr5-1479 chr5 95472018 95472228 + 15.7 0.000 intron (NM_014639, intron 40 of 42) LTR78|LTR|ERV1 80757 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr17-1097 chr17 64449171 64449381 + 15.7 0.000 intron (NM_001369493, intron 1 of 9) intron (NM_001369493, intron 1 of 9) 161 NM_001291316 284021 Hs.631749 NM_001085423 ENSG00000271605 MILR1 Allergin-1|C17orf60|MCA-32|MCA32 mast cell immunoglobulin like receptor 1 protein-coding chr7-2110 chr7 16417049 16417259 + 15.7 0.000 intron (NM_001101426, intron 1 of 9) L1PA16|LINE|L1 4384 NR_160656 729920 Hs.636502 NM_001101417 ENSG00000214960 CRPPA ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD CDP-L-ribitol pyrophosphorylase A protein-coding chr4-1900 chr4 23022124 23022334 + 15.7 0.000 Intergenic MamGypLTR1a|LTR|Gypsy 308140 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr9-2365 chr9 113973858 113974068 + 15.7 0.000 intron (NM_001318042, intron 2 of 14) intron (NM_001318042, intron 2 of 14) 97654 NM_001318042 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr21-270 chr21 17513377 17513587 + 15.7 0.000 intron (NM_001207066, intron 1 of 7) CpG 439 NM_001207064 1525 Hs.627078 NM_001338 ENSG00000154639 CXADR CAR|CAR4/6|HCAR CXADR Ig-like cell adhesion molecule protein-coding chr1-2595 chr1 56948704 56948914 + 15.7 0.000 intron (NM_000066, intron 6 of 11) intron (NM_000066, intron 6 of 11) 17206 NM_000066 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr6-1702 chr6 22145949 22146159 + 15.7 0.000 intron (NR_034143, intron 2 of 2) intron (NR_034143, intron 2 of 2) 1139 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr5-1473 chr5 84378386 84378596 + 15.7 0.000 intron (NM_001278642, intron 1 of 9) intron (NM_001278642, intron 1 of 9) 6376 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr6-1059 chr6 14881551 14881761 + 15.7 0.000 Intergenic Intergenic -364413 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr11-1549 chr11 36470012 36470222 + 15.7 0.000 Intergenic Intergenic 40155 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr2-939 chr2 219598033 219598243 + 15.7 0.000 exon (NM_052902, exon 2 of 25) exon (NM_052902, exon 2 of 25) 281 NM_052902 114790 Hs.22410 NM_052902 ENSG00000144589 STK11IP LIP1|LKB1IP|STK11IP1 serine/threonine kinase 11 interacting protein protein-coding chr7-1110 chr7 100272019 100272229 + 15.7 0.000 promoter-TSS (NR_028038) promoter-TSS (NR_028038) 81 NR_028038 352954 Hs.556063 NM_178831 ENSG00000239521 CASTOR3 GATS|STAG3OS CASTOR family member 3 protein-coding chr4-2069 chr4 17545881 17546091 + 15.7 0.000 Intergenic Intergenic 30821 NM_001079827 645104 Hs.631526 NM_001079827 ENSG00000249581 CLRN2 - clarin 2 protein-coding chr9-851 chr9 137465359 137465569 + 15.7 0.000 intron (NM_001098537, intron 26 of 34) intron (NM_001098537, intron 26 of 34) -6130 NM_015537 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr2-2154 chr2 201118565 201118775 + 15.7 0.000 promoter-TSS (NR_147252) promoter-TSS (NR_147252) -46 NR_147252 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS|cFLIP CASP8 and FADD like apoptosis regulator protein-coding chr7-2209 chr7 107622618 107622828 + 15.7 0.000 non-coding (NR_163926, exon 10 of 10) non-coding (NR_163926, exon 10 of 10) -38105 NM_000441 5172 Hs.571246 NM_000441 ENSG00000091137 SLC26A4 DFNB4|EVA|PDS|TDH2B solute carrier family 26 member 4 protein-coding chrX-492 chrX 26399582 26399792 + 15.7 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -158650 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr10-1589 chr10 28054364 28054574 + 15.7 0.000 intron (NR_134518, intron 16 of 16) intron (NR_134518, intron 16 of 16) 18909 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr5-1090 chr5 76790671 76790881 + 15.7 0.000 Intergenic Intergenic -28254 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr19-994 chr19 39436007 39436217 + 15.7 0.000 promoter-TSS (NM_001363860) promoter-TSS (NM_001363860) -163 NM_001020 6217 Hs.397609 NM_001020 ENSG00000105193 RPS16 S16 ribosomal protein S16 protein-coding chr17-1863 chr17 31674984 31675194 + 15.7 0.000 Intergenic MER5B|DNA|hAT-Charlie 99678 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr2-1102 chr2 84958369 84958579 + 15.7 0.000 Intergenic Intergenic -12687 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr1-2941 chr1 58412261 58412471 + 15.7 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 134360 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr5-1259 chr5 68251997 68252207 + 15.7 0.000 intron (NM_181523, intron 2 of 15) intron (NM_181523, intron 2 of 15) 36346 NM_181523 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr6-1692 chr6 16318570 16318780 + 15.7 0.000 intron (NM_000332, intron 8 of 8) intron (NM_000332, intron 8 of 8) 80088 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr1-1383 chr1 94045586 94045796 + 15.7 0.000 intron (NM_000350, intron 19 of 49) intron (NM_000350, intron 19 of 49) 75457 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr11-1470 chr11 106368825 106369035 + 15.7 0.000 Intergenic Intergenic 117523 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr7-1176 chr7 19708944 19709154 + 15.7 0.000 promoter-TSS (NM_001002926) promoter-TSS (NM_001002926) -12 NM_001002926 221830 Hs.353035 NM_001002926 ENSG00000105849 TWISTNB - TWIST neighbor protein-coding chr21-223 chr21 25639895 25640105 + 15.7 0.000 intron (NR_072999, intron 1 of 9) CpG 718 NM_001270407 58494 Hs.517227 NM_021219 ENSG00000154721 JAM2 C21orf43|CD322|JAM-B|JAMB|PRO245|VE-JAM|VEJAM junctional adhesion molecule 2 protein-coding chr4-709 chr4 86359950 86360160 + 15.7 0.000 promoter-TSS (NM_001351624) promoter-TSS (NM_001351624) -2 NM_001318069 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr3-2136 chr3 112671998 112672208 + 15.7 0.000 Intergenic L2b|LINE|L2 -30960 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr16-1264 chr16 50603461 50603671 + 15.7 0.000 intron (NM_033119, intron 3 of 9) intron (NM_033119, intron 3 of 9) 55170 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr14-878 chr14 99670738 99670948 + 15.7 0.000 TTS (NM_001329411) TTS (NM_001329411) -13455 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr16-1033 chr16 27578733 27578943 + 15.7 0.000 intron (NM_015202, intron 2 of 27) AluSz|SINE|Alu 28694 NM_015202 23247 Hs.460459 NM_015202 ENSG00000047578 KIAA0556 JBTS26 KIAA0556 protein-coding chr2-2263 chr2 241774961 241775171 + 15.7 0.000 Intergenic Intergenic -1756 NM_022134 64090 Hs.632556 NM_022134 ENSG00000154252 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding chr13-788 chr13 74451111 74451321 + 15.7 0.000 Intergenic Intergenic 32043 NR_047005 100874151 Hs.564552 NR_047005 ENSG00000226240 LINC00381 - long intergenic non-protein coding RNA 381 ncRNA chr10-2030 chr10 75283533 75283743 + 15.7 0.000 intron (NR_120651, intron 1 of 3) (AACCC)n|Simple_repeat|Simple_repeat -12745 NR_038226 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA chr11-2741 chr11 33310920 33311130 + 15.7 0.000 intron (NM_001278162, intron 2 of 15) L1MC4a|LINE|L1 52694 NM_001278162 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr2-1347 chr2 199229187 199229397 + 15.7 0.000 Intergenic HERVL18-int|LTR|ERVL 228647 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr20-699 chr20 15882702 15882912 + 15.7 0.000 intron (NM_001351663, intron 9 of 17) intron (NM_001351663, intron 9 of 17) 40507 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr7-1545 chr7 1924460 1924670 + 15.7 0.000 intron (NM_001013837, intron 17 of 18) L1MDa|LINE|L1 16006 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr1-1666 chr1 24362994 24363204 + 15.7 0.000 intron (NM_001199013, intron 7 of 8) intron (NM_001199013, intron 7 of 8) 40059 NM_021180 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr12-997 chr12 123238066 123238276 + 15.7 0.000 intron (NM_001194995, intron 1 of 2) AluSx3|SINE|Alu 4427 NM_001143905 91574 Hs.319128 NM_152269 ENSG00000130921 C12orf65 COXPD7|SPG55 chromosome 12 open reading frame 65 protein-coding chr11-2337 chr11 74460684 74460894 + 15.7 0.000 intron (NM_005472, intron 2 of 2) L2|LINE|L2 6766 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 BRGDA6|HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr8-518 chr8 133190857 133191067 + 15.7 0.000 promoter-TSS (NR_037944) promoter-TSS (NR_037944) -77 NR_037944 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr11-1566 chr11 91982147 91982357 + 15.7 0.000 Intergenic Intergenic -242782 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr1-4166 chr1 22248962 22249172 + 15.7 0.000 Intergenic Intergenic -17172 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr2-1922 chr2 191543923 191544133 + 15.7 0.000 Intergenic Intergenic -134044 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr5-1209 chr5 111345955 111346165 + 15.7 0.000 intron (NM_001323376, intron 2 of 8) intron (NM_001323376, intron 2 of 8) 121676 NM_001323376 814 Hs.438801 NM_001744 ENSG00000152495 CAMK4 CaMK IV|CaMK-GR|CaMKIV|caMK calcium/calmodulin dependent protein kinase IV protein-coding chr3-2160 chr3 140931819 140932029 + 15.7 0.000 Intergenic L1MB7|LINE|L1 -9912 NM_001104647 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr6-1697 chr6 17417831 17418041 + 15.7 0.000 intron (NM_006366, intron 1 of 12) intron (NM_006366, intron 1 of 12) 24341 NM_006366 10486 Hs.132902 NM_006366 ENSG00000112186 CAP2 - cyclase associated actin cytoskeleton regulatory protein 2 protein-coding chr12-1966 chr12 120343881 120344091 + 15.7 0.000 intron (NM_002442, intron 14 of 14) AluSx|SINE|Alu -16207 NM_000928 5319 Hs.992 NM_000928 ENSG00000170890 PLA2G1B PLA2|PLA2A|PPLA2 phospholipase A2 group IB protein-coding chr15-1142 chr15 57472213 57472423 + 15.7 0.000 intron (NM_032866, intron 8 of 18) L2b|LINE|L2 95813 NM_001252335 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr17-1840 chr17 15392538 15392748 + 15.7 0.000 Intergenic MIR3|SINE|MIR -51046 NM_031898 64518 Hs.414648 NM_031898 ENSG00000125409 TEKT3 - tektin 3 protein-coding chr12-903 chr12 113271934 113272144 + 15.7 0.000 intron (NM_001143819, intron 8 of 28) intron (NM_001143819, intron 8 of 28) -19484 NR_106820 102465457 NR_106820 ENSG00000274822 MIR6762 hsa-mir-6762 microRNA 6762 ncRNA chr22-576 chr22 21824131 21824341 + 15.7 0.000 intron (NM_002745, intron 1 of 8) intron (NM_002745, intron 1 of 8) 43444 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr10-1104 chr10 83612137 83612347 + 15.7 0.000 Intergenic MLT1F2-int|LTR|ERVL-MaLR 64847 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr22-514 chr22 20319535 20319745 + 15.7 0.000 exon (NM_033257, exon 2 of 5) exon (NM_033257, exon 2 of 5) 420 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr5-3163 chr5 72138913 72139123 + 15.7 0.000 intron (NM_005909, intron 2 of 6) intron (NM_005909, intron 2 of 6) -30449 NR_039967 100616377 NR_039967 ENSG00000264099 MIR4803 - microRNA 4803 ncRNA chr12-2578 chr12 115103736 115103946 + 15.7 0.000 Intergenic Intergenic -419666 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr14-1065 chr14 90871870 90872080 + 15.7 0.000 3' UTR (NM_001322234, exon 17 of 17) 3' UTR (NM_001322234, exon 17 of 17) -55545 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr9-1158 chr9 20981345 20981555 + 15.7 0.000 exon (NM_017794, exon 40 of 46) exon (NM_017794, exon 40 of 46) 50190 NM_001010915 401494 Hs.716678 NM_001010915 ENSG00000188921 HACD4 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 protein-coding chr1-2307 chr1 42941136 42941346 + 15.7 0.000 intron (NM_006516, intron 2 of 9) intron (NM_006516, intron 2 of 9) 17627 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr6-536 chr6 73512970 73513180 + 15.7 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 5363 NR_132981 106635684 NR_132981 SNORD141B - small nucleolar RNA, C/D box 141B snoRNA chr13-835 chr13 61050637 61050847 + 15.7 0.000 Intergenic L2c|LINE|L2 149138 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr11-4467 chr11 104700799 104701009 + 15.7 0.000 Intergenic Intergenic -91602 NR_120585 102723895 Hs.48803 NR_120585 ENSG00000256422 LINC02552 - long intergenic non-protein coding RNA 2552 ncRNA chr11-2720 chr11 1380925 1381135 + 15.7 0.000 Intergenic AluSx|SINE|Alu -8904 NR_046331 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr16-906 chr16 31472961 31473171 + 15.7 0.000 promoter-TSS (NM_015927) promoter-TSS (NM_015927) -139 NM_015927 7041 Hs.513530 NM_015927 ENSG00000140682 TGFB1I1 ARA55|HIC-5|HIC5|TSC-5 transforming growth factor beta 1 induced transcript 1 protein-coding chr16-874 chr16 30941962 30942172 + 15.7 0.000 intron (NM_001099784, intron 7 of 10) intron (NM_001099784, intron 7 of 10) -7001 NM_152288 93129 Hs.745104 NM_152288 ENSG00000175938 ORAI3 TMEM142C ORAI calcium release-activated calcium modulator 3 protein-coding chr3-1348 chr3 138062822 138063032 + 15.7 0.000 exon (NM_173543, exon 16 of 16) exon (NM_173543, exon 16 of 16) 50553 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr13-514 chr13 31767602 31767812 + 15.7 0.000 intron (NM_130806, intron 5 of 17) MIR3|SINE|MIR 28165 NM_001166058 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr1-2953 chr1 87093285 87093495 + 15.7 0.000 intron (NM_012262, intron 4 of 6) L2c|LINE|L2 -36375 NR_026989 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr4-817 chr4 123555488 123555698 + 15.7 0.000 Intergenic Intergenic -94398 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr5-722 chr5 132190284 132190494 + 15.7 0.000 3' UTR (NM_001365678, exon 16 of 16) 3' UTR (NM_001365678, exon 16 of 16) 5513 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA chr1-5984 chr1 41843387 41843597 + 15.7 0.000 intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 75430 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr9-1604 chr9 121351200 121351410 + 15.7 0.000 intron (NM_001270526, intron 4 of 6) intron (NM_001270526, intron 4 of 6) 18945 NR_073037 2040 Hs.253903 NM_004099 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding chr7-2143 chr7 44117309 44117519 + 15.7 0.000 intron (NM_006230, intron 4 of 10) intron (NM_006230, intron 4 of 10) 6094 NM_001256879 5425 Hs.306791 NM_006230 ENSG00000106628 POLD2 - DNA polymerase delta 2, accessory subunit protein-coding chr1-1897 chr1 183989156 183989366 + 15.7 0.000 intron (NM_001303421, intron 1 of 11) intron (NM_001303421, intron 1 of 11) 48467 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr5-1197 chr5 72920703 72920913 + 15.7 0.000 Intergenic Intergenic -35233 NM_138782 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr11-1374 chr11 78350146 78350356 + 15.7 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) -8371 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr1-2441 chr1 21665774 21665984 + 15.7 0.000 intron (NM_001145657, intron 1 of 26) intron (NM_001145657, intron 1 of 26) 3478 NM_001350525 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr12-668 chr12 130839123 130839333 + 15.7 0.000 promoter-TSS (NM_001980) promoter-TSS (NM_001980) 22 NM_001351050 2054 Hs.437585 NM_001980 ENSG00000111450 STX2 EPIM|EPM|STX2A|STX2B|STX2C syntaxin 2 protein-coding chr2-4179 chr2 188496244 188496454 + 15.7 0.000 intron (NM_001252669, intron 4 of 8) intron (NM_001252669, intron 4 of 8) 198857 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr6-906 chr6 136039299 136039509 + 15.7 0.000 intron (NM_018945, intron 2 of 12) intron (NM_018945, intron 2 of 12) 33423 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr16-1006 chr16 64952192 64952402 + 15.7 0.000 intron (NM_001330576, intron 10 of 11) L2c|LINE|L2 169766 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr6-588 chr6 157235737 157235947 + 15.7 0.000 Intergenic Intergenic 88417 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr3-1104 chr3 48847134 48847344 + 15.7 0.000 promoter-TSS (NR_109996) promoter-TSS (NR_109996) 635 NM_001321989 5576 Hs.631923 NM_004157 ENSG00000114302 PRKAR2A PKR2|PRKAR2 protein kinase cAMP-dependent type II regulatory subunit alpha protein-coding chr3-1333 chr3 75816996 75817206 + 15.7 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -31552 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chrX-1309 chrX 124507293 124507503 + 15.7 0.000 intron (NM_014253, intron 18 of 30) intron (NM_014253, intron 18 of 30) 161116 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr9-1189 chr9 110179843 110180053 + 15.7 0.000 Intergenic MIR|SINE|MIR 28185 NM_001012993 401546 Hs.125608 NM_001012993 ENSG00000188959 C9orf152 bA470J20.2 chromosome 9 open reading frame 152 protein-coding chr11-1769 chr11 29306570 29306780 + 15.7 0.000 Intergenic L2a|LINE|L2 -287738 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr11-800 chr11 110296692 110296902 + 15.7 0.000 promoter-TSS (NM_001260492) promoter-TSS (NM_001260492) -85 NM_001260494 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr4-1204 chr4 88320898 88321108 + 15.7 0.000 intron (NR_134237, intron 3 of 3) intron (NR_134237, intron 3 of 3) 36073 NR_134237 105369192 Hs.733660 NR_134236 ENSG00000246375 PPM1K-DT - PPM1K divergent transcript ncRNA chr4-769 chr4 80335610 80335820 + 15.7 0.000 promoter-TSS (NM_001206997) promoter-TSS (NM_001206997) -5 NM_001206997 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr17-1396 chr17 41623000 41623210 + 15.7 0.000 intron (NM_000422, intron 1 of 7) intron (NM_000422, intron 1 of 7) 1470 NM_000422 3872 Hs.2785 NM_000422 ENSG00000128422 KRT17 39.1|CK-17|K17|PC|PC2|PCHC1 keratin 17 protein-coding chr3-2369 chr3 170689646 170689856 + 15.7 0.000 intron (NR_135556, intron 2 of 5) intron (NR_135556, intron 2 of 5) -103676 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr14-685 chr14 100329309 100329519 + 15.7 0.000 exon (NM_001350877, exon 6 of 6) exon (NM_001350877, exon 6 of 6) 6075 NM_207117 283600 Hs.108268 NM_207117 ENSG00000140107 SLC25A47 C14orf68|HDMCP|HMFN1655 solute carrier family 25 member 47 protein-coding chr10-962 chr10 66639560 66639770 + 15.7 0.000 intron (NM_001127384, intron 9 of 17) intron (NM_001127384, intron 9 of 17) -286371 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr17-1133 chr17 64457251 64457461 + 15.7 0.000 intron (NM_001291316, intron 3 of 8) intron (NM_001291316, intron 3 of 8) 8241 NM_001291316 284021 Hs.631749 NM_001085423 ENSG00000271605 MILR1 Allergin-1|C17orf60|MCA-32|MCA32 mast cell immunoglobulin like receptor 1 protein-coding chr14-1445 chr14 92511966 92512176 + 15.7 0.000 Intergenic L1MB7|LINE|L1 -1710 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr16-1064 chr16 11079173 11079383 + 15.7 0.000 intron (NM_015226, intron 18 of 22) intron (NM_015226, intron 18 of 22) 134714 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr17-661 chr17 40108339 40108549 + 15.7 0.000 Intergenic Intergenic -7855 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|REVERBA|REVERBalpha|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr8-2750 chr8 108074171 108074381 + 15.7 0.000 intron (NM_178565, intron 2 of 5) intron (NM_178565, intron 2 of 5) 7663 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr7-1244 chr7 2390168 2390378 + 15.7 0.000 Intergenic LTR5_Hs|LTR|ERVK -13338 NM_001243794 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr22-1054 chr22 46413444 46413654 + 15.7 0.000 intron (NM_014246, intron 5 of 34) intron (NM_014246, intron 5 of 34) 77835 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr18-312 chr18 59885652 59885862 + 15.7 0.000 Intergenic Intergenic -14239 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr1-3166 chr1 85617589 85617799 + 15.7 0.000 Intergenic Intergenic 36933 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr19-964 chr19 44753269 44753479 + 15.7 0.000 intron (NM_005178, intron 2 of 8) intron (NM_005178, intron 2 of 8) 4666 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr13-317 chr13 75482183 75482393 + 15.7 0.000 promoter-TSS (NM_014832) promoter-TSS (NM_014832) -119 NM_014832 9882 Hs.210891 NM_014832 ENSG00000136111 TBC1D4 AS160|NIDDM5 TBC1 domain family member 4 protein-coding chr7-1220 chr7 100174298 100174508 + 15.7 0.000 intron (NM_152742, intron 4 of 9) intron (NM_152742, intron 4 of 9) 2978 NM_152742 221914 Hs.211701 NM_152742 ENSG00000213420 GPC2 - glypican 2 protein-coding chr8-2568 chr8 40081537 40081747 + 15.7 0.000 Intergenic Intergenic -71840 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr1-2725 chr1 3520358 3520568 + 15.7 0.000 intron (NM_001409, intron 5 of 36) intron (NM_001409, intron 5 of 36) 40327 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr2-846 chr2 1743170 1743380 + 15.7 0.000 intron (NM_012293, intron 1 of 22) CpG 1240 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr11-2081 chr11 93532529 93532739 + 15.7 0.000 intron (NM_020179, intron 1 of 2) MLT2B3|LTR|ERVL 10757 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr5-1014 chr5 109455712 109455922 + 15.7 0.000 Intergenic Intergenic -45843 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr7-1594 chr7 129089684 129089894 + 15.7 0.000 Intergenic MER89|LTR|ERV1 34566 NR_002187 286016 Hs.369665 NR_002187 ENSG00000230359 TPI1P2 - triosephosphate isomerase 1 pseudogene 2 pseudo chr15-676 chr15 82875569 82875779 + 15.7 0.000 intron (NM_004839, intron 2 of 8) intron (NM_004839, intron 2 of 8) 66046 NM_001080435 123720 Hs.377360 NM_001080435 ENSG00000156232 WHAMM WHAMM1|WHDC1 WASP homolog associated with actin, golgi membranes and microtubules protein-coding chr19-1043 chr19 18588656 18588866 + 15.7 0.000 promoter-TSS (NM_001100419) promoter-TSS (NM_001100419) 76 NM_001100419 55049 Hs.655317 NM_017967 ENSG00000006015 REX1BD C19orf60 required for excision 1-B domain containing protein-coding chrX-972 chrX 130393563 130393773 + 15.7 0.000 Intergenic Intergenic -8131 NM_178471 139760 Hs.496762 NM_178471 ENSG00000147262 GPR119 GPCR2 G protein-coupled receptor 119 protein-coding chr9-652 chr9 105557908 105558118 + 15.7 0.000 promoter-TSS (NM_001198963) promoter-TSS (NM_001198963) -117 NM_001079802 2218 Hs.55777 NM_006731 ENSG00000106692 FKTN CMD1X|FCMD|LGMD2M|LGMDR13|MDDGA4|MDDGB4|MDDGC4 fukutin protein-coding chr9-1606 chr9 121725015 121725225 + 15.7 0.000 intron (NM_032552, intron 3 of 16) intron (NM_032552, intron 3 of 16) -17665 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr1-888 chr1 46198246 46198456 + 15.7 0.000 promoter-TSS (NM_017739) promoter-TSS (NM_017739) 98 NM_017739 55624 Hs.525134 NM_017739 ENSG00000085998 POMGNT1 GNTI.2|GnT I.2|LGMD2O|LGMDR15|MEB|MGAT1.2|RP76|gnT-I.2 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) protein-coding chr22-331 chr22 19987003 19987213 + 15.7 0.000 intron (NM_001670, intron 3 of 19) CpG 23355 NR_039918 100616414 NR_039918 ENSG00000284031 MIR4761 - microRNA 4761 ncRNA chr8-520 chr8 142727036 142727246 + 15.7 0.000 promoter-TSS (NM_001363000) promoter-TSS (NM_001363000) -82 NM_001363000 51337 Hs.368402 NM_016647 ENSG00000130193 THEM6 C8orf55|DSCD75 thioesterase superfamily member 6 protein-coding chr9-1173 chr9 76510248 76510458 + 15.7 0.000 Intergenic Intergenic 9720 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr2-2743 chr2 168633090 168633300 + 15.7 0.000 intron (NM_001256126, intron 4 of 10) intron (NM_001256126, intron 4 of 10) 50252 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr14-673 chr14 69191521 69191731 + 15.7 0.000 promoter-TSS (NM_001193362) promoter-TSS (NM_001193362) -140 NR_034165 55218 Hs.533878 NM_018199 ENSG00000081177 EXD2 C14orf114|EXDL2 exonuclease 3'-5' domain containing 2 protein-coding chr10-760 chr10 94362702 94362912 + 15.7 0.000 intron (NM_022451, intron 1 of 20) CpG 132 NM_022451 64318 Hs.74899 NM_022451 ENSG00000173145 NOC3L AD24|C10orf117|FAD24 NOC3 like DNA replication regulator protein-coding chr4-876 chr4 152273397 152273607 + 15.7 0.000 Intergenic Intergenic -64153 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr14-367 chr14 34982705 34982915 + 15.7 0.000 promoter-TSS (NR_151701) promoter-TSS (NR_151701) -88 NM_001146282 6729 Hs.167535 NM_003136 ENSG00000100883 SRP54 - signal recognition particle 54 protein-coding chr3-1669 chr3 183988020 183988230 + 15.7 0.000 intron (NR_135125, intron 4 of 6) intron (NR_135125, intron 4 of 6) -18213 NR_046570 100873982 Hs.570696 NR_046570 ENSG00000223882 ABCC5-AS1 - ABCC5 antisense RNA 1 ncRNA chr1-7259 chr1 230140759 230140969 + 15.7 0.000 intron (NM_004481, intron 1 of 15) intron (NM_004481, intron 1 of 15) 73626 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr8-719 chr8 37885843 37886053 + 15.7 0.000 intron (NM_001002814, intron 1 of 5) intron (NM_001002814, intron 1 of 5) 13549 NM_001002814 80223 Hs.191179 NM_025151 ENSG00000156675 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 protein-coding chr11-1600 chr11 34053424 34053634 + 15.7 0.000 intron (NM_005898, intron 2 of 18) intron (NM_005898, intron 2 of 18) 1798 NM_203364 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr5-856 chr5 130992351 130992561 + 15.7 0.000 Intergenic Intergenic 172800 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr17-2117 chr17 9576654 9576864 + 15.7 0.000 promoter-TSS (NR_033656) promoter-TSS (NR_033656) 117 NM_145054 146845 Hs.232270 NM_145054 ENSG00000166596 CFAP52 WDR16|WDRPUH cilia and flagella associated protein 52 protein-coding chr10-3685 chr10 103815025 103815235 + 15.7 0.000 intron (NM_014631, intron 1 of 13) L1M4|LINE|L1 40276 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr11-1323 chr11 86440442 86440652 + 15.7 0.000 TTS (NR_147831) TTS (NR_147831) 65660 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr20-1045 chr20 63525290 63525500 + 15.7 0.000 Intergenic MER31-int|LTR|ERV1 4630 NM_024299 79144 Hs.79625 NM_024299 ENSG00000125534 PPDPF C20orf149|dJ697K14.9|exdpf pancreatic progenitor cell differentiation and proliferation factor protein-coding chr6-901 chr6 131823448 131823658 + 15.7 0.000 intron (NM_006208, intron 1 of 24) intron (NM_006208, intron 1 of 24) 15533 NM_006208 5167 Hs.527295 NM_006208 ENSG00000197594 ENPP1 ARHR2|COLED|M6S1|NPP1|NPPS|PC-1|PCA1|PDNP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding chrX-699 chrX 70313728 70313938 + 15.7 0.000 intron (NM_012310, intron 7 of 30) intron (NM_012310, intron 7 of 30) 23729 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chr1-2474 chr1 86825442 86825652 + 15.7 0.000 Intergenic Intergenic 88579 NM_004261 9403 Hs.362728 NM_004261 ENSG00000183291 SELENOF SEP15 selenoprotein F protein-coding chr6-1386 chr6 104996291 104996501 + 15.7 0.000 intron (NM_001004317, intron 2 of 3) MER90|LTR|ERV1 39289 NM_001004317 389421 Hs.23616 NM_001004317 ENSG00000187772 LIN28B CSDD2 lin-28 homolog B protein-coding chr10-1560 chr10 124220543 124220753 + 15.7 0.000 Intergenic Intergenic -127050 NM_001270764 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chrX-403 chrX 71292987 71293197 + 15.7 0.000 intron (NM_001145408, intron 5 of 12) intron (NM_001145408, intron 5 of 12) -8658 NM_001303277 26548 Hs.109999 NM_012278 ENSG00000147166 ITGB1BP2 CHORDC3|ITGB1BP|MELUSIN|MSTP015 integrin subunit beta 1 binding protein 2 protein-coding chr16-1380 chr16 64657496 64657706 + 15.7 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 464462 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr13-510 chr13 26254843 26255053 + 15.7 0.000 intron (NM_001318368, intron 1 of 12) CpG 819 NM_001346501 1024 Hs.382306 NM_001260 ENSG00000132964 CDK8 K35 cyclin dependent kinase 8 protein-coding chr18-570 chr18 50649943 50650153 + 15.7 0.000 intron (NM_001292039, intron 1 of 4) intron (NM_001292039, intron 1 of 4) 89961 NM_001292039 5596 Hs.433728 NM_002747 ENSG00000141639 MAPK4 ERK-4|ERK4|PRKM4|p63-MAPK|p63MAPK mitogen-activated protein kinase 4 protein-coding chr2-683 chr2 64988958 64989168 + 15.7 0.000 promoter-TSS (NM_003038) promoter-TSS (NM_003038) -336 NM_003038 6509 Hs.654352 NM_003038 ENSG00000115902 SLC1A4 ASCT1|SATT|SPATCCM solute carrier family 1 member 4 protein-coding chr6-1783 chr6 105483690 105483900 + 15.7 0.000 Intergenic Intergenic -80713 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr5-556 chr5 141618780 141618990 + 15.7 0.000 exon (NM_001314007, exon 1 of 29) exon (NM_001314007, exon 1 of 29) 115 NM_001314007 1729 Hs.529451 NM_005219 ENSG00000131504 DIAPH1 DFNA1|DIA1|DRF1|LFHL1|SCBMS|hDIA1 diaphanous related formin 1 protein-coding chr19-1908 chr19 51408917 51409127 + 15.7 0.000 TTS (NM_001171161) TTS (NM_001171161) -6702 NM_001256795 100129083 Hs.284813 NM_001256795 LOC100129083 - uncharacterized LOC100129083 protein-coding chr11-3316 chr11 108228499 108228709 + 15.7 0.000 intron (NM_001351834, intron 4 of 63) intron (NM_001351834, intron 4 of 63) 5075 NM_001351836 472 Hs.367437 NM_000051 ENSG00000149311 ATM AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1 ATM serine/threonine kinase protein-coding chr9-1676 chr9 76932808 76933018 + 15.7 0.000 Intergenic Intergenic -26799 NM_015225 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr8-806 chr8 125664277 125664487 + 15.7 0.000 Intergenic Intergenic 232173 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr16-1470 chr16 333705 333915 + 15.7 0.000 intron (NM_003502, intron 2 of 10) intron (NM_003502, intron 2 of 10) 18913 NR_134879 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr11-961 chr11 75328840 75329050 + 15.7 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 6241 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr19-1612 chr19 41876614 41876824 + 15.7 0.000 promoter-TSS (NM_021601) promoter-TSS (NM_021601) -401 NM_001783 973 Hs.631567 NM_001783 ENSG00000105369 CD79A IGA|MB-1 CD79a molecule protein-coding chr3-1008 chr3 72234475 72234685 + 15.7 0.000 Intergenic Intergenic 83323 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr1-2513 chr1 211975671 211975881 + 15.7 0.000 intron (NM_015434, intron 12 of 19) MER20B|DNA|hAT-Charlie -59777 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr18-512 chr18 41761618 41761828 + 15.7 0.000 Intergenic Intergenic -193511 NM_001308020 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr10-1957 chr10 22803719 22803929 + 15.7 0.000 Intergenic Intergenic -89246 NM_005028 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr7-1640 chr7 39517888 39518098 + 15.7 0.000 Intergenic Intergenic -48411 NM_001282446 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr18-592 chr18 44579583 44579793 + 15.7 0.000 Intergenic Intergenic 47909 NR_131768 105667213 Hs.135737 NR_131768 LINC01601 - long intergenic non-protein coding RNA 1601 ncRNA chr7-3436 chr7 158847531 158847741 + 15.7 0.000 intron (NM_001350914, intron 1 of 24) MER4B-int|LTR|ERV1 8391 NM_001350914 55112 Hs.389945 NM_018051 ENSG00000126870 WDR60 FAP163|SRPS6|SRTD8 WD repeat domain 60 protein-coding chr2-2442 chr2 62197822 62198032 + 15.7 0.000 intron (NM_006577, intron 1 of 1) intron (NM_006577, intron 1 of 1) 1812 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr2-1162 chr2 179454878 179455088 + 15.7 0.000 intron (NR_148054, intron 5 of 8) Tigger3b|DNA|TcMar-Tigger 107605 NR_148055 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr1-3829 chr1 24762363 24762573 + 15.7 0.000 intron (NM_013943, intron 1 of 5) L2c|LINE|L2 17021 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr1-1540 chr1 220962295 220962505 + 15.7 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger -82260 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr18-557 chr18 79856647 79856857 + 15.7 0.000 Intergenic Charlie13a|DNA|hAT-Charlie -6916 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr1-2884 chr1 240459723 240459933 + 15.7 0.000 intron (NM_020066, intron 16 of 17) L4_C_Mam|LINE|RTE-X 152327 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr1-2153 chr1 17696562 17696772 + 15.7 0.000 intron (NR_137287, intron 29 of 29) intron (NR_137287, intron 29 of 29) -58666 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr19-627 chr19 38402902 38403112 + 15.7 0.000 promoter-TSS (NM_174905) promoter-TSS (NM_174905) -128 NM_174905 147965 Hs.355162 NM_174905 ENSG00000130244 FAM98C - family with sequence similarity 98 member C protein-coding chr9-1138 chr9 128279602 128279812 + 15.7 0.000 intron (NM_001040011, intron 2 of 4) LTR13A|LTR|ERVK 3561 NM_001318089 375757 Hs.259594 NM_001040011 ENSG00000175854 SWI5 C9orf119|SAE3 SWI5 homologous recombination repair protein protein-coding chrX-369 chrX 48918996 48919206 + 15.7 0.000 promoter-TSS (NM_006875) promoter-TSS (NM_006875) -77 NM_006875 11040 Hs.727148 NM_006875 ENSG00000102096 PIM2 - Pim-2 proto-oncogene, serine/threonine kinase protein-coding chr6-2329 chr6 113690641 113690851 + 15.7 0.000 Intergenic Intergenic -40671 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chr17-638 chr17 3893081 3893291 + 15.7 0.000 promoter-TSS (NM_172207) promoter-TSS (NM_172207) -133 NM_032294 84254 Hs.8417 NM_032294 ENSG00000004660 CAMKK1 CAMKKA calcium/calmodulin dependent protein kinase kinase 1 protein-coding chr2-1373 chr2 15177101 15177311 + 15.7 0.000 intron (NR_052013, intron 50 of 50) intron (NR_052013, intron 50 of 50) 384128 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr6-1256 chr6 34391117 34391327 + 15.7 0.000 intron (NM_001202470, intron 5 of 8) intron (NM_001202470, intron 5 of 8) 1447 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr12-1674 chr12 75750801 75751011 + 15.7 0.000 Intergenic Intergenic -239297 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr7-1535 chr7 103713468 103713678 + 15.7 0.000 intron (NM_005045, intron 8 of 64) intron (NM_005045, intron 8 of 64) -267366 NM_198999 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr17-1838 chr17 12984052 12984262 + 15.7 0.000 intron (NM_001321164, intron 18 of 20) intron (NM_001321164, intron 18 of 20) 33870 NM_018127 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr6-1062 chr6 16725271 16725481 + 15.7 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 34808 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr15-2238 chr15 99755863 99756073 + 15.7 0.000 Intergenic LTR41B|LTR|ERVL -22524 NM_001284422 145748 Hs.562568 NM_152449 ENSG00000183060 LYSMD4 - LysM domain containing 4 protein-coding chr12-741 chr12 1476102 1476312 + 15.7 0.000 intron (NR_027948, intron 19 of 19) AluY|SINE|Alu -24284 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr10-830 chr10 103759095 103759305 + 15.7 0.000 intron (NM_014631, intron 3 of 13) intron (NM_014631, intron 3 of 13) 12421 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr6-1543 chr6 71394105 71394315 + 15.7 0.000 Intergenic Intergenic 9411 NR_029504 407029 NR_029504 ENSG00000207827 MIR30A MIRN30A|mir-30a microRNA 30a ncRNA chr8-1101 chr8 48101480 48101690 + 15.7 0.000 Intergenic Intergenic 93154 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr20-1164 chr20 62812707 62812917 + 15.7 0.000 exon (NM_007346, exon 7 of 7) exon (NM_007346, exon 7 of 7) -4238 NM_001853 1299 Hs.716639 NM_001853 ENSG00000092758 COL9A3 DJ885L7.4.1|EDM3|IDD|MED collagen type IX alpha 3 chain protein-coding chr12-2879 chr12 26011927 26012137 + 15.7 0.000 intron (NM_001164747, intron 2 of 5) intron (NM_001164747, intron 2 of 5) 38277 NM_001164747 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr15-796 chr15 62928950 62929160 + 15.7 0.000 Intergenic Intergenic 105098 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr10-2003 chr10 58641103 58641313 + 15.7 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -73807 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr15-704 chr15 82132773 82132983 + 15.7 0.000 intron (NM_001040610, intron 17 of 17) intron (NM_001040610, intron 17 of 17) 44284 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr20-286 chr20 19460473 19460683 + 15.7 0.000 intron (NM_020689, intron 2 of 16) MIR|SINE|MIR -175982 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr21-73 chr21 37366462 37366672 + 15.7 0.000 promoter-TSS (NM_101395) promoter-TSS (NM_101395) -206 NM_001347721 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr12-845 chr12 122464330 122464540 + 15.7 0.000 Intergenic Intergenic 36497 NM_001350937 55596 Hs.37706 NM_017612 ENSG00000033030 ZCCHC8 - zinc finger CCHC-type containing 8 protein-coding chr6-2404 chr6 151258172 151258382 + 15.7 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 18310 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr14-898 chr14 54805787 54805997 + 15.7 0.000 Intergenic Intergenic 51059 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr8-910 chr8 120605591 120605801 + 15.7 0.000 intron (NM_021021, intron 3 of 6) intron (NM_021021, intron 3 of 6) -155557 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr1-3126 chr1 49060744 49060954 + 15.7 0.000 intron (NM_001323575, intron 4 of 12) intron (NM_001323575, intron 4 of 12) -196562 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr9-1532 chr9 129695357 129695567 + 15.7 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 23244 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr17-2060 chr17 60960393 60960603 + 15.7 0.000 intron (NM_001330413, intron 14 of 25) MLT1C-int|LTR|ERVL-MaLR 282647 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr10-2470 chr10 25399877 25400087 + 15.7 0.000 intron (NM_020752, intron 3 of 10) MIRb|SINE|MIR -223706 NR_027333 100128811 Hs.700407 NR_027333 ENSG00000233642 GPR158-AS1 - GPR158 antisense RNA 1 ncRNA chr5-860 chr5 140357664 140357874 + 15.7 0.000 Intergenic Intergenic -2425 NM_031467 83697 Hs.550313 NM_031467 ENSG00000113073 SLC4A9 AE4 solute carrier family 4 member 9 protein-coding chr2-1202 chr2 168247482 168247692 + 15.7 0.000 promoter-TSS (NM_013233) promoter-TSS (NM_013233) 8 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr17-2651 chr17 19992843 19993053 + 15.7 0.000 Intergenic Intergenic -15092 NM_001330152 11216 Hs.642676 NM_007202 ENSG00000108599 AKAP10 AKAP-10|D-AKAP-2|D-AKAP2|PRKA10 A-kinase anchoring protein 10 protein-coding chr10-1628 chr10 77230374 77230584 + 15.7 0.000 intron (NM_001322838, intron 3 of 29) intron (NM_001322838, intron 3 of 29) 89648 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr3-1892 chr3 146421684 146421894 + 15.7 0.000 Intergenic Intergenic 47512 NM_001199978 57047 Hs.744414 NM_020359 ENSG00000163746 PLSCR2 - phospholipid scramblase 2 protein-coding chr4-1091 chr4 165683950 165684160 + 15.7 0.000 promoter-TSS (NR_121676) promoter-TSS (NR_121676) -584 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr11-1578 chr11 126419903 126420113 + 15.7 0.000 Intergenic Intergenic 13921 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr12-1697 chr12 125067187 125067397 + 15.7 0.000 intron (NM_001319839, intron 1 of 16) intron (NM_001319839, intron 1 of 16) 1857 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr1-4205 chr1 97947841 97948051 + 15.7 0.000 Intergenic Intergenic -6206 NR_146275 109729128 NR_146275 LINC01930 - long intergenic non-protein coding RNA 1930 ncRNA chr1-2279 chr1 236455439 236455649 + 15.7 0.000 intron (NM_080738, intron 4 of 5) intron (NM_080738, intron 4 of 5) 60131 NM_080738 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr2-2155 chr2 207488028 207488238 + 15.7 0.000 Intergenic Intergenic -41829 NR_163947 chr3-2087 chr3 11612694 11612904 + 15.7 0.000 intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) -8218 NM_001284391 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr15-1128 chr15 42471533 42471743 + 15.7 0.000 intron (NM_001366844, intron 2 of 19) AluSx|SINE|Alu -14071 NM_022473 64397 Hs.511143 NM_022473 ENSG00000103994 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding chr12-1756 chr12 76020854 76021064 + 15.7 0.000 Intergenic Intergenic 10817 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr14-993 chr14 96584245 96584455 + 15.7 0.000 Intergenic Intergenic 81485 NM_001293628 10914 Hs.253726 NM_032632 ENSG00000090060 PAPOLA PAP|PAP-alpha poly(A) polymerase alpha protein-coding chrX-678 chrX 16273394 16273604 + 15.7 0.000 Intergenic L1PB1|LINE|L1 106018 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - MAGE family member B17 protein-coding chr17-2095 chr17 81582456 81582666 + 15.7 0.000 intron (NM_001369698, intron 12 of 16) AluJo|SINE|Alu -5128 NR_130139 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr8-1493 chr8 48172301 48172511 + 15.7 0.000 Intergenic Intergenic 163975 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr14-768 chr14 24935838 24936048 + 15.7 0.000 intron (NM_001351943, intron 3 of 6) intron (NM_001351943, intron 3 of 6) 113057 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr1-2178 chr1 40612420 40612630 + 15.7 0.000 Intergenic LTR41B|LTR|ERVL 53157 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr2-1395 chr2 64779409 64779619 + 15.7 0.000 Intergenic Intergenic 84117 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr4-1668 chr4 140610219 140610429 + 15.7 0.000 Intergenic Intergenic 32756 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr19-1304 chr19 7197320 7197530 + 15.7 0.000 intron (NM_001079817, intron 2 of 20) CpG 96989 NM_000208 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr3-973 chr3 126753425 126753635 + 15.7 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 49290 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr10-1032 chr10 114174033 114174243 + 15.7 0.000 promoter-TSS (NM_153249) promoter-TSS (NM_153249) 41 NR_031747 100302224 NR_031747 ENSG00000284442 MIR2110 hsa-mir-2110|mir-2110 microRNA 2110 ncRNA chr9-1088 chr9 35116770 35116980 + 15.7 0.000 Intergenic Intergenic -1013 NM_025182 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr10-694 chr10 43455628 43455838 + 15.7 0.000 intron (NM_001355444, intron 1 of 3) CpG 18622 NM_001355444 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding chr1-4019 chr1 180752184 180752394 + 15.7 0.000 intron (NR_137330, intron 2 of 12) intron (NR_137330, intron 2 of 12) 120267 NR_137330 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding chr10-1140 chr10 49486607 49486817 + 15.7 0.000 intron (NM_001346440, intron 8 of 20) L1M5|LINE|L1 37569 NM_170753 267004 Hs.49063 NM_170753 ENSG00000225830 PGBD3 - piggyBac transposable element derived 3 protein-coding chr8-752 chr8 76798338 76798548 + 15.7 0.000 intron (NM_024721, intron 4 of 10) intron (NM_024721, intron 4 of 10) -115168 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA chr1-1508 chr1 21896826 21897036 + 15.7 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 40379 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr9-1186 chr9 99299317 99299527 + 15.7 0.000 Intergenic MIRb|SINE|MIR 75835 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr9-2005 chr9 131418938 131419148 + 15.7 0.000 Intergenic Intergenic -11047 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr3-1254 chr3 168040706 168040916 + 15.7 0.000 exon (NM_014498, exon 7 of 16) exon (NM_014498, exon 7 of 16) 55113 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr12-1845 chr12 41219673 41219883 + 15.7 0.000 intron (NM_001164595, intron 3 of 9) LTR90B|LTR|LTR 31458 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr7-2030 chr7 74586872 74587082 + 15.7 0.000 intron (NM_016328, intron 22 of 26) AluJo|SINE|Alu -8991 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr1-5186 chr1 172719700 172719910 + 15.7 0.000 Intergenic Intergenic 60702 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr2-1530 chr2 131093568 131093778 + 15.7 0.000 promoter-TSS (NM_001321747) promoter-TSS (NM_001321747) -213 NM_001321745 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr4-1122 chr4 127249239 127249449 + 15.7 0.000 Intergenic L2a|LINE|L2 -383613 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr5-990 chr5 37147786 37147996 + 15.7 0.000 intron (NM_023073, intron 42 of 51) intron (NM_023073, intron 42 of 51) -101155 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chr9-481 chr9 127917046 127917256 + 15.7 0.000 promoter-TSS (NM_175039) promoter-TSS (NM_175039) -110 NM_175039 27090 Hs.3972 NM_014403 ENSG00000136840 ST6GALNAC4 IV|SIAT3-C|SIAT3C|SIAT7-D|SIAT7D|ST6GALNACIV|ST6GalNAc ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding chr12-923 chr12 93592962 93593172 + 15.7 0.000 Intergenic Intergenic 20392 NM_001270471 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr1-5965 chr1 32031982 32032192 + 15.7 0.000 intron (NR_073498, intron 3 of 8) intron (NR_073498, intron 3 of 8) 18219 NM_006559 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr15-973 chr15 52019989 52020199 + 15.7 0.000 promoter-TSS (NR_156732) promoter-TSS (NR_156732) 875 NM_002748 5597 Hs.411847 NM_002748 ENSG00000069956 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding chr1-3274 chr1 222974560 222974770 + 15.7 0.000 intron (NM_001369594, intron 2 of 7) intron (NM_001369594, intron 2 of 7) 46241 NM_001369594 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr4-909 chr4 152534909 152535119 + 15.7 0.000 promoter-TSS (NM_033632) promoter-TSS (NM_033632) 19 NM_033632 55294 Hs.561245 NM_018315 ENSG00000109670 FBXW7 AGO|CDC4|FBW6|FBW7|FBX30|FBXO30|FBXW6|SEL-10|SEL10|hAgo|hCdc4 F-box and WD repeat domain containing 7 protein-coding chr11-1322 chr11 78416929 78417139 + 15.7 0.000 intron (NM_080491, intron 1 of 9) CpG 786 NM_080491 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr7-1237 chr7 139443363 139443573 + 15.7 0.000 Intergenic L1M7|LINE|L1 -15942 NR_033999 100129148 Hs.744449 NR_033999 LOC100129148 - uncharacterized LOC100129148 ncRNA chr19-846 chr19 48810881 48811091 + 15.7 0.000 promoter-TSS (NM_001284325) promoter-TSS (NM_001284325) 43 NM_001164773 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr1-5128 chr1 154176426 154176636 + 15.7 0.000 intron (NM_152263, intron 2 of 9) intron (NM_152263, intron 2 of 9) 1673 NM_001278191 7170 Hs.535581 NM_152263 ENSG00000143549 TPM3 CAPM1|CFTD|HEL-189|HEL-S-82p|NEM1|OK/SW-cl.5|TM-5|TM3|TM30|TM30nm|TM5|TPM3nu|TPMsk3|TRK|hscp30 tropomyosin 3 protein-coding chr3-4298 chr3 159872538 159872748 + 15.7 0.000 intron (NM_001197113, intron 6 of 10) intron (NM_001197113, intron 6 of 10) 32782 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr9-1032 chr9 130681279 130681489 + 15.7 0.000 exon (NM_021619, exon 5 of 5) exon (NM_021619, exon 5 of 5) -12376 NM_001282708 23404 Hs.654643 NM_014285 ENSG00000130713 EXOSC2 RRP4|Rrp4p|SHRF|hRrp4p|p7 exosome component 2 protein-coding chr9-1176 chr9 83707712 83707922 + 15.7 0.000 promoter-TSS (NR_135839) promoter-TSS (NR_135839) -18 NR_135839 105376114 Hs.9589 NR_135839 ENSG00000254473 LOC105376114 - uncharacterized LOC105376114 ncRNA chr16-1316 chr16 89742924 89743134 + 15.7 0.000 intron (NM_000135, intron 36 of 42) intron (NM_000135, intron 36 of 42) 21492 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr15-1285 chr15 101233626 101233836 + 15.7 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 18317 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr6-668 chr6 105428329 105428539 + 15.7 0.000 Intergenic Intergenic -25352 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr9-877 chr9 95317316 95317526 + 15.7 0.000 promoter-TSS (NM_001243743) promoter-TSS (NM_001243743) -167 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr1-2260 chr1 202283416 202283626 + 15.7 0.000 intron (NM_001017403, intron 6 of 17) intron (NM_001017403, intron 6 of 17) 58415 NM_014176 29089 Hs.5199 NM_014176 ENSG00000077152 UBE2T FANCT|HSPC150|PIG50 ubiquitin conjugating enzyme E2 T protein-coding chr18-373 chr18 12410337 12410547 + 15.7 0.000 intron (NM_001142405, intron 1 of 6) intron (NM_001142405, intron 1 of 6) 2513 NM_006553 10650 Hs.514718 NM_006553 ENSG00000141391 PRELID3A C18orf43|HFL-EDDG1|SLMO1 PRELI domain containing 3A protein-coding chr9-989 chr9 137217618 137217828 + 15.7 0.000 3' UTR (NM_014434, exon 14 of 14) 3' UTR (NM_014434, exon 14 of 14) 3600 NM_031297 727800 Hs.512767 NM_031297 ENSG00000212864 RNF208 - ring finger protein 208 protein-coding chr10-930 chr10 126388178 126388388 + 15.7 0.000 5' UTR (NM_021641, exon 1 of 19) 5' UTR (NM_021641, exon 1 of 19) 194 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr9-2135 chr9 111035155 111035365 + 15.7 0.000 intron (NM_001351399, intron 1 of 5) AluJr|SINE|Alu 1520 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr3-3085 chr3 135452463 135452673 + 15.7 0.000 Intergenic Intergenic -513160 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr15-622 chr15 50854698 50854908 + 15.7 0.000 Intergenic Intergenic -53880 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr5-599 chr5 181260949 181261159 + 15.7 0.000 promoter-TSS (NM_032765) promoter-TSS (NM_032765) 89 NM_001346049 84851 Hs.458412 NM_032765 ENSG00000183718 TRIM52 RNF102 tripartite motif containing 52 protein-coding GL000218.1-1 GL000218.1 97145 97355 + 15.7 0.000 NA NA NA NA chr10-1455 chr10 74047597 74047807 + 15.7 0.000 intron (NM_014000, intron 2 of 21) intron (NM_014000, intron 2 of 21) 49586 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr10-1693 chr10 13956982 13957192 + 15.7 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 14809 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr2-3977 chr2 74274473 74274683 + 15.7 0.000 intron (NM_133478, intron 8 of 30) intron (NM_133478, intron 8 of 30) 40447 NM_021196 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr1-3104 chr1 36380317 36380527 + 15.7 0.000 intron (NM_032017, intron 1 of 11) intron (NM_032017, intron 1 of 11) 5502 NM_032017 83931 Hs.471768 NM_032017 ENSG00000196182 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding chr3-537 chr3 43769623 43769833 + 15.7 0.000 Intergenic Intergenic -78134 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr3-2729 chr3 121262901 121263111 + 15.7 0.000 intron (NM_001348343, intron 18 of 27) L1PA7|LINE|L1 213366 NR_049861 100847043 NR_049861 ENSG00000264477 MIR5682 - microRNA 5682 ncRNA chr7-1071 chr7 48140236 48140446 + 15.7 0.000 Intergenic LTR22A|LTR|ERVK -31117 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr1-2653 chr1 171286532 171286742 + 15.7 0.000 TTS (NM_001282693) TTS (NM_001282693) -27546 NM_002022 2329 Hs.386502 NM_002022 ENSG00000076258 FMO4 FMO2 flavin containing dimethylaniline monoxygenase 4 protein-coding GL383533.1-1 GL383533.1 75139 75349 + 15.7 0.000 NA NA NA NA chr9-2548 chr9 129693891 129694101 + 15.7 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 24710 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr16-582 chr16 4183816 4184026 + 15.7 0.000 Intergenic CpG 58159 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr7-2220 chr7 121193070 121193280 + 15.7 0.000 intron (NM_001105533, intron 15 of 17) intron (NM_001105533, intron 15 of 17) -132192 NM_016087 51384 Hs.272375 NM_016087 ENSG00000002745 WNT16 - Wnt family member 16 protein-coding chr20-587 chr20 19632640 19632850 + 15.7 0.000 intron (NM_020689, intron 6 of 16) intron (NM_020689, intron 6 of 16) -253776 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr6-926 chr6 25263610 25263820 + 15.7 0.000 Intergenic Intergenic -2308 NR_110863 101928663 Hs.561600 NR_110862 LOC101928663 - uncharacterized LOC101928663 ncRNA chr8-819 chr8 142726506 142726716 + 15.7 0.000 promoter-TSS (NM_001363000) promoter-TSS (NM_001363000) 362 NR_038925 100288181 Hs.716823 NR_038925 ENSG00000253741 LNCOC1 Lnc-OC1 lncRNA associated with ovarian cancer 1 ncRNA chr19-1097 chr19 50414916 50415126 + 15.7 0.000 intron (NR_046402, intron 20 of 25) MSR1|Satellite|Satellite -3917 NM_001244000 6689 Hs.437905 NM_003121 ENSG00000269404 SPIB SPI-B Spi-B transcription factor protein-coding chr16-1564 chr16 85028875 85029085 + 15.7 0.000 intron (NM_001286566, intron 1 of 11) intron (NM_001286566, intron 1 of 11) 1229 NM_014732 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chr7-2156 chr7 48274687 48274897 + 15.7 0.000 exon (NM_152701, exon 17 of 62) exon (NM_152701, exon 17 of 62) 103334 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr8-861 chr8 67712719 67712929 + 15.7 0.000 intron (NM_020361, intron 1 of 10) MER44B|DNA|TcMar-Tigger 33536 NM_020361 57094 Hs.658850 NM_020361 ENSG00000165078 CPA6 CPAH|ETL5|FEB11 carboxypeptidase A6 protein-coding chr13-1135 chr13 28704742 28704952 + 15.7 0.000 intron (NM_001347960, intron 4 of 5) MamRTE1|LINE|RTE-BovB 14123 NM_001135919 283537 Hs.117167 NM_181785 ENSG00000139508 SLC46A3 FKSG16 solute carrier family 46 member 3 protein-coding chr21-178 chr21 15000164 15000374 + 15.7 0.000 intron (NM_003489, intron 3 of 3) intron (NM_003489, intron 3 of 3) 64731 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr2-1402 chr2 73926753 73926963 + 15.7 0.000 promoter-TSS (NM_080916) promoter-TSS (NM_080916) -22 NM_001318863 1716 Hs.469022 NM_001929 ENSG00000114956 DGUOK MTDPS3|NCPH|PEOB4|dGK deoxyguanosine kinase protein-coding chr1-3956 chr1 113535026 113535236 + 15.7 0.000 intron (NM_001142782, intron 1 of 20) intron (NM_001142782, intron 1 of 20) 144616 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr3-4495 chr3 57852892 57853102 + 15.7 0.000 intron (NM_001304420, intron 5 of 21) intron (NM_001304420, intron 5 of 21) -36917 NM_001311179 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr19-683 chr19 52139962 52140172 + 15.7 0.000 promoter-TSS (NR_135823) promoter-TSS (NR_135823) -129 NR_135823 90317 Hs.645225 NM_178523 ENSG00000204611 ZNF616 - zinc finger protein 616 protein-coding chr21-399 chr21 38875756 38875966 + 15.7 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 18322 NR_109926 101928398 Hs.122403 NR_109926 LOC101928398 - uncharacterized LOC101928398 ncRNA chr5-639 chr5 73216039 73216249 + 15.7 0.000 Intergenic CpG -14183 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr19-1186 chr19 39038233 39038443 + 15.7 0.000 Intergenic Intergenic -5789 NM_178820 126433 Hs.187461 NM_178820 ENSG00000161243 FBXO27 FBG5|Fbx27 F-box protein 27 protein-coding chr9-1378 chr9 71793800 71794010 + 15.7 0.000 Intergenic Intergenic -25392 NM_001135820 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr4-1738 chr4 43457955 43458165 + 15.7 0.000 intron (NR_146993, intron 2 of 2) LTR43B|LTR|ERV1 34483 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr6-948 chr6 158026326 158026536 + 15.7 0.000 intron (NM_003898, intron 2 of 26) MIR|SINE|MIR 9338 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr12-526 chr12 69007134 69007344 + 15.7 0.000 Intergenic Intergenic -43999 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr2-2148 chr2 178225158 178225368 + 15.7 0.000 intron (NM_001201480, intron 1 of 25) (AAAGA)n|Simple_repeat|Simple_repeat 30751 NM_032523 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr14-1148 chr14 30194883 30195093 + 15.7 0.000 Intergenic Intergenic -267141 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr15-1076 chr15 34224695 34224905 + 15.7 0.000 promoter-TSS (NM_016454) promoter-TSS (NM_016454) -216 NR_147140 51234 Hs.250905 NM_016454 ENSG00000128463 EMC4 PIG17|TMEM85 ER membrane protein complex subunit 4 protein-coding chr16-989 chr16 1300838 1301048 + 15.6 0.000 Intergenic Intergenic -8209 NM_194261 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr3-2599 chr3 152328956 152329166 + 15.6 0.000 intron (NM_207296, intron 1 of 7) intron (NM_207296, intron 1 of 7) 11929 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr1-2714 chr1 234486951 234487161 + 15.6 0.000 Intergenic Intergenic -7877 NM_005646 6894 Hs.498115 NM_005646 ENSG00000059588 TARBP1 TRM3|TRMT3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding chr17-4057 chr17 78226316 78226526 + 15.6 0.000 TTS (NM_001012271) TTS (NM_001012271) -4872 NM_001204212 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr12-1142 chr12 109900888 109901098 + 15.6 0.000 intron (NM_032300, intron 1 of 12) MIR3|SINE|MIR 416 NM_032300 84260 Hs.410924 NM_032300 ENSG00000139437 TCHP TpMs trichoplein keratin filament binding protein-coding chr2-4787 chr2 37128649 37128859 + 15.6 0.000 intron (NM_002759, intron 10 of 16) HERVFH19-int|LTR|ERV1 19068 NM_001135652 5610 Hs.131431 NM_002759 ENSG00000055332 EIF2AK2 EIF2AK1|PKR|PPP1R83|PRKR eukaryotic translation initiation factor 2 alpha kinase 2 protein-coding chr4-1625 chr4 74283314 74283524 + 15.6 0.000 intron (NM_001144978, intron 7 of 7) intron (NM_001144978, intron 7 of 7) -25051 NM_001270991 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr10-1157 chr10 125085637 125085847 + 15.6 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -52872 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr8-1217 chr8 102368216 102368426 + 15.6 0.000 intron (NM_001282873, intron 1 of 58) intron (NM_001282873, intron 1 of 58) 44368 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr2-1496 chr2 235615405 235615615 + 15.6 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -97589 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr10-1709 chr10 61046812 61047022 + 15.6 0.000 Intergenic Intergenic 30642 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chrX-361 chrX 136577561 136577771 + 15.6 0.000 Intergenic Intergenic 26788 NR_030631 100126324 NR_030631 ENSG00000216060 MIR934 MIRN934|hsa-mir-934|mir-934 microRNA 934 ncRNA chr3-2072 chr3 185225585 185225795 + 15.6 0.000 intron (NM_001966, intron 4 of 6) L2a|LINE|L2 27582 NR_106712 100847054 NR_106712 ENSG00000264614 MIR5588 - microRNA 5588 ncRNA chr11-3363 chr11 123973865 123974075 + 15.6 0.000 Intergenic Intergenic 3721 NM_001004474 219873 Hs.553637 NM_001004474 ENSG00000196248 OR10S1 OR11-279 olfactory receptor family 10 subfamily S member 1 protein-coding KI270733.1-12 KI270733.1 155565 155775 + 15.6 0.000 NA NA NA NA chr3-1407 chr3 146308309 146308519 + 15.6 0.000 Intergenic MIR|SINE|MIR -57235 NM_001128306 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr11-476 chr11 108121530 108121740 + 15.6 0.000 promoter-TSS (NM_000019) promoter-TSS (NM_000019) 68 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr7-2911 chr7 132508055 132508265 + 15.6 0.000 exon (NM_001105543, exon 2 of 4) exon (NM_001105543, exon 2 of 4) 68310 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr14-2089 chr14 71765135 71765345 + 15.6 0.000 Intergenic Intergenic -166931 NM_001204423 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr3-1307 chr3 184134151 184134361 + 15.6 0.000 Intergenic Intergenic -1102 NM_003907 8893 Hs.283551 NM_003907 ENSG00000145191 EIF2B5 CACH|CLE|EIF-2B|EIF2Bepsilon|LVWM eukaryotic translation initiation factor 2B subunit epsilon protein-coding chr11-3733 chr11 27254876 27255086 + 15.6 0.000 Intergenic Intergenic -34868 NR_125767 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr15-386 chr15 77944495 77944705 + 15.6 0.000 promoter-TSS (NR_157580) promoter-TSS (NR_157580) -39 NR_157580 440292 NR_157580 LOC440292 - COMM domain containing 4 pseudogene pseudo chr16-2864 chr16 87486960 87487170 + 15.6 0.000 intron (NM_015144, intron 1 of 12) intron (NM_015144, intron 1 of 12) 4789 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr5-2203 chr5 163909858 163910068 + 15.6 0.000 Intergenic MER58C|DNA|hAT-Charlie 404344 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr2-3252 chr2 238357496 238357706 + 15.6 0.000 intron (NM_001139490, intron 13 of 14) intron (NM_001139490, intron 13 of 14) 37057 NM_001139490 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding chr1-4273 chr1 8745829 8746039 + 15.6 0.000 intron (NM_001042681, intron 1 of 22) AluJo|SINE|Alu 71706 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr3-2528 chr3 37290543 37290753 + 15.6 0.000 intron (NM_001172713, intron 6 of 22) intron (NM_001172713, intron 6 of 22) -46453 NR_149029 152048 Hs.596176 NM_152532 ENSG00000270194 LOC152048 - uncharacterized FLJ31715 ncRNA chr5-1627 chr5 123157968 123158178 + 15.6 0.000 intron (NM_001136239, intron 4 of 7) intron (NM_001136239, intron 4 of 7) -67757 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr1-2233 chr1 161153780 161153990 + 15.6 0.000 promoter-TSS (NM_016406) promoter-TSS (NM_016406) -93 NM_016406 51506 Hs.301412 NM_016406 ENSG00000143222 UFC1 HSPC155|NEDSG ubiquitin-fold modifier conjugating enzyme 1 protein-coding chr16-1867 chr16 79938363 79938573 + 15.6 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 143219 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr15-459 chr15 40776869 40777079 + 15.6 0.000 intron (NM_018163, intron 4 of 10) intron (NM_018163, intron 4 of 10) 6994 NM_001130448 643338 Hs.631715 NM_001130448 ENSG00000188277 C15orf62 - chromosome 15 open reading frame 62 protein-coding chr5-2123 chr5 74735229 74735439 + 15.6 0.000 intron (NR_104006, intron 15 of 19) intron (NR_104006, intron 15 of 19) 31783 NR_104006 84340 Hs.277154 NM_032380 ENSG00000164347 GFM2 EF-G2mt|EFG2|MRRF2|MST027|MSTP027|RRF|RRF2|RRF2mt|hEFG2|mEF-G 2 G elongation factor mitochondrial 2 protein-coding chr12-633 chr12 56159167 56159377 + 15.6 0.000 intron (NM_021019, intron 2 of 6) intron (NM_021019, intron 2 of 6) 913 NM_021019 4637 Hs.632717 NM_021019 ENSG00000092841 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin light chain 6 protein-coding chr19-660 chr19 18594284 18594494 + 15.6 0.000 exon (NM_004750, exon 7 of 9) exon (NM_004750, exon 7 of 9) 5704 NM_001100419 55049 Hs.655317 NM_017967 ENSG00000006015 REX1BD C19orf60 required for excision 1-B domain containing protein-coding chr9-1183 chr9 93589751 93589961 + 15.6 0.000 intron (NM_005392, intron 1 of 21) intron (NM_005392, intron 1 of 21) -4985 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr17-1169 chr17 40298890 40299100 + 15.6 0.000 intron (NM_001254, intron 9 of 11) intron (NM_001254, intron 9 of 11) -10185 NM_000964 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding chr6-771 chr6 34887944 34888154 + 15.6 0.000 promoter-TSS (NM_005643) promoter-TSS (NM_005643) -7 NM_005643 6882 Hs.112444 NM_005643 ENSG00000064995 TAF11 MGC:15243|PRO2134|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding chr1-5728 chr1 86757722 86757932 + 15.6 0.000 Intergenic Intergenic 53251 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr16-1294 chr16 85285994 85286204 + 15.6 0.000 intron (NR_038859, intron 2 of 2) intron (NR_038859, intron 2 of 2) 3141 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr8-1525 chr8 87918297 87918507 + 15.6 0.000 Intergenic Intergenic -44387 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr3-545 chr3 50611810 50612020 + 15.6 0.000 promoter-TSS (NM_145071) promoter-TSS (NM_145071) 53 NM_001243926 7867 Hs.234521 NM_004635 ENSG00000114738 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3 MAPK activated protein kinase 3 protein-coding chr8-780 chr8 57531698 57531908 + 15.6 0.000 Intergenic Intergenic 188016 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr9-2048 chr9 12775837 12776047 + 15.6 0.000 exon (NM_203403, exon 1 of 2) exon (NM_203403, exon 1 of 2) 922 NM_203403 286343 Hs.445356 NM_203403 ENSG00000153714 LURAP1L C9orf150|HYST0841|LRAP35b|bA3L8.2 leucine rich adaptor protein 1 like protein-coding chr1-3124 chr1 46223638 46223848 + 15.6 0.000 Intergenic Intergenic -3438 NM_001243766 55624 Hs.525134 NM_017739 ENSG00000085998 POMGNT1 GNTI.2|GnT I.2|LGMD2O|LGMDR15|MEB|MGAT1.2|RP76|gnT-I.2 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) protein-coding chr6-1102 chr6 93785181 93785391 + 15.6 0.000 Intergenic Intergenic 66983 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr2-1670 chr2 85893932 85894142 + 15.6 0.000 Intergenic Intergenic 4757 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr10-2112 chr10 126270163 126270373 + 15.6 0.000 intron (NM_001288974, intron 3 of 18) intron (NM_001288974, intron 3 of 18) 118209 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr5-1496 chr5 124316044 124316254 + 15.6 0.000 intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 122371 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr4-1468 chr4 185358555 185358765 + 15.6 0.000 intron (NM_001317781, intron 16 of 18) MIR3|SINE|MIR 20338 NM_018409 55805 Hs.558513 NM_018409 ENSG00000109771 LRP2BP - LRP2 binding protein protein-coding chr2-1399 chr2 69603952 69604162 + 15.6 0.000 intron (NM_014911, intron 2 of 21) intron (NM_014911, intron 2 of 21) 39682 NM_014911 22848 Hs.468878 NM_014911 ENSG00000115977 AAK1 - AP2 associated kinase 1 protein-coding chr14-795 chr14 72476878 72477088 + 15.6 0.000 intron (NM_001370288, intron 11 of 16) intron (NM_001370288, intron 11 of 16) -39837 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr6-1365 chr6 56851750 56851960 + 15.6 0.000 promoter-TSS (NM_001144770) promoter-TSS (NM_001144770) 61 NM_001144770 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr7-1955 chr7 99277217 99277427 + 15.6 0.000 intron (NR_002147, intron 1 of 15) intron (NR_002147, intron 1 of 15) 4021 NR_002147 84176 Hs.621401 NR_002147 MYH16 MHC20|MYH16P|MYH5 myosin heavy chain 16 pseudogene pseudo chr5-1179 chr5 53560625 53560835 + 15.6 0.000 promoter-TSS (NM_001318051) promoter-TSS (NM_001318051) 91 NR_134475 4724 Hs.528222 NM_002495 ENSG00000164258 NDUFS4 AQDQ|CI-18|CI-18 kDa|CI-AQDQ|MC1DN1 NADH:ubiquinone oxidoreductase subunit S4 protein-coding chr7-1731 chr7 17600493 17600703 + 15.6 0.000 Intergenic Intergenic -41689 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr15-968 chr15 48289611 48289821 + 15.6 0.000 intron (NM_001184832, intron 23 of 26) Tigger3b|DNA|TcMar-Tigger -41379 NM_001330286 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr4-501 chr4 38667117 38667327 + 15.6 0.000 intron (NM_016531, intron 1 of 5) intron (NM_016531, intron 1 of 5) -2594 NR_026804 79667 Hs.29725 NM_024614 ENSG00000231160 KLF3-AS1 - KLF3 antisense RNA 1 ncRNA chr4-874 chr4 143337097 143337307 + 15.6 0.000 exon (NM_002039, exon 1 of 10) exon (NM_002039, exon 1 of 10) 326 NM_207123 2549 Hs.80720 NM_002039 ENSG00000109458 GAB1 DFNB26 GRB2 associated binding protein 1 protein-coding chr14-391 chr14 104774634 104774844 + 15.6 0.000 intron (NM_001014431, intron 7 of 13) intron (NM_001014431, intron 7 of 13) 18862 NM_005163 207 Hs.525622 NM_005163 ENSG00000142208 AKT1 AKT|CWS6|PKB|PKB-ALPHA|PRKBA|RAC|RAC-ALPHA AKT serine/threonine kinase 1 protein-coding chr12-1903 chr12 75554052 75554262 + 15.6 0.000 Intergenic Intergenic -42548 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr1-3462 chr1 40944860 40945070 + 15.6 0.000 Intergenic Intergenic -34731 NR_125440 1503 Hs.473087 NM_001905 ENSG00000171793 CTPS1 CTPS|GATD5|IMD24 CTP synthase 1 protein-coding chr15-761 chr15 69417742 69417952 + 15.6 0.000 intron (NM_138555, intron 3 of 22) intron (NM_138555, intron 3 of 22) -2818 NR_132969 145694 Hs.147229 NR_132969 ENSG00000259426 LOC145694 - uncharacterized LOC145694 ncRNA chr11-1973 chr11 12182916 12183126 + 15.6 0.000 intron (NR_144420, intron 3 of 27) intron (NR_144420, intron 3 of 27) 19338 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr5-966 chr5 150487869 150488079 + 15.6 0.000 Intergenic Intergenic -1982 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chr13-631 chr13 84050534 84050744 + 15.6 0.000 Intergenic Intergenic -89963 NR_046871 100874128 Hs.578060 NR_046871 LINC00333 NCRNA00333 long intergenic non-protein coding RNA 333 ncRNA chr3-1854 chr3 106957032 106957242 + 15.6 0.000 Intergenic Intergenic 283501 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr14-403 chr14 64504677 64504887 + 15.6 0.000 promoter-TSS (NM_014950) promoter-TSS (NM_014950) 12 NM_014950 22890 Hs.605143 NM_014950 ENSG00000126804 ZBTB1 ZNF909 zinc finger and BTB domain containing 1 protein-coding chr20-975 chr20 46705410 46705620 + 15.6 0.000 Intergenic Intergenic -4134 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATORS|ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr3-4163 chr3 125946535 125946745 + 15.6 0.000 Intergenic Intergenic -9596 NM_001015050 200810 Hs.591299 NM_001015050 ENSG00000189366 ALG1L ALG1L1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like protein-coding chr7-1723 chr7 6435663 6435873 + 15.6 0.000 intron (NM_139179, intron 3 of 14) intron (NM_139179, intron 3 of 14) 12186 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr7-1193 chr7 46855198 46855408 + 15.6 0.000 Intergenic Intergenic -158181 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr6-1090 chr6 71238384 71238594 + 15.6 0.000 Intergenic Intergenic -50322 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr7-1951 chr7 79284374 79284584 + 15.6 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) -168478 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr11-1442 chr11 68346812 68347022 + 15.6 0.000 intron (NM_002335, intron 1 of 22) intron (NM_002335, intron 1 of 22) 34326 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr19-1109 chr19 4831595 4831805 + 15.6 0.000 promoter-TSS (NM_182919) promoter-TSS (NM_182919) 42 NM_182919 148022 Hs.29344 NM_014261 ENSG00000127666 TICAM1 IIAE6|MyD88-3|PRVTIRB|TICAM-1|TRIF toll like receptor adaptor molecule 1 protein-coding chr9-438 chr9 128787167 128787377 + 15.6 0.000 promoter-TSS (NM_018201) promoter-TSS (NM_018201) 19 NM_018201 54662 Hs.3376 NM_018201 ENSG00000107021 TBC1D13 - TBC1 domain family member 13 protein-coding chr14-1271 chr14 67824428 67824638 + 15.6 0.000 intron (NM_133509, intron 2 of 10) AluSz|SINE|Alu 941 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr12-764 chr12 106084034 106084244 + 15.6 0.000 intron (NM_014840, intron 3 of 6) intron (NM_014840, intron 3 of 6) 55894 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr11-2447 chr11 35170674 35170884 + 15.6 0.000 intron (NM_001001389, intron 1 of 16) intron (NM_001001389, intron 1 of 16) 7829 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr1-3995 chr1 159910524 159910734 + 15.6 0.000 Intergenic Intergenic -10464 NM_012337 25790 Hs.647705 NM_012337 ENSG00000213085 CFAP45 CCDC19|NESG1 cilia and flagella associated protein 45 protein-coding chr2-834 chr2 171522105 171522315 + 15.6 0.000 promoter-TSS (NM_001127383) promoter-TSS (NM_001127383) -23 NM_001256909 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr7-1645 chr7 44793884 44794094 + 15.6 0.000 Intergenic Intergenic -2692 NM_021130 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr2-3348 chr2 218325806 218326016 + 15.6 0.000 TTS (NR_125777) TTS (NR_125777) 2732 NM_022572 25953 Hs.98475 NM_015488 ENSG00000127838 PNKD BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR-1S|MR1|PDC|PKND1|PNKD1|TAHCCP2 PNKD metallo-beta-lactamase domain containing protein-coding chr2-1189 chr2 112301071 112301281 + 15.6 0.000 intron (NM_198581, intron 2 of 11) L1M8|LINE|L1 25579 NM_198581 376940 Hs.190477 NM_198581 ENSG00000188177 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding chr18-785 chr18 39160289 39160499 + 15.6 0.000 Intergenic Intergenic 461781 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr1-2218 chr1 145706363 145706573 + 15.6 0.000 intron (NM_002614, intron 1 of 9) intron (NM_002614, intron 1 of 9) 900 NM_001201325 5174 Hs.444751 NM_002614 ENSG00000174827 PDZK1 CAP70|CLAMP|NHERF-3|NHERF3|PDZD1 PDZ domain containing 1 protein-coding chr19-1987 chr19 5396422 5396632 + 15.6 0.000 Intergenic Intergenic -55715 NM_130854 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr9-2303 chr9 135513765 135513975 + 15.6 0.000 Intergenic Intergenic -7423 NR_121579 101928525 Hs.713076 NR_121579 ENSG00000226706 LOC101928525 - uncharacterized LOC101928525 ncRNA chr2-2862 chr2 167800576 167800786 + 15.6 0.000 Intergenic Intergenic -17991 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr22-430 chr22 41413707 41413917 + 15.6 0.000 Intergenic CpG 31870 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr15-1359 chr15 69304283 69304493 + 15.6 0.000 intron (NM_017705, intron 1 of 8) intron (NM_017705, intron 1 of 8) 5476 NM_017705 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chr10-811 chr10 79138970 79139180 + 15.6 0.000 intron (NM_020338, intron 2 of 24) intron (NM_020338, intron 2 of 24) 70109 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr9-2103 chr9 89422200 89422410 + 15.6 0.000 intron (NM_001371200, intron 2 of 20) intron (NM_001371200, intron 2 of 20) 57585 NR_163888 chr4-1766 chr4 186273103 186273313 + 15.6 0.000 intron (NM_000128, intron 4 of 14) intron (NM_000128, intron 4 of 14) 7019 NM_001354804 2160 Hs.1430 NM_000128 ENSG00000088926 F11 FXI|PTA coagulation factor XI protein-coding chr12-898 chr12 108850948 108851158 + 15.6 0.000 intron (NM_018984, intron 2 of 14) intron (NM_018984, intron 2 of 14) 6530 NM_018984 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr1-3471 chr1 51490827 51491037 + 15.6 0.000 intron (NM_001981, intron 1 of 24) L1MD2|LINE|L1 28334 NM_001981 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding chrX-840 chrX 118420614 118420824 + 15.6 0.000 intron (NM_001184966, intron 11 of 17) L2c|LINE|L2 34325 NR_031685 100302214 NR_031685 ENSG00000221463 MIR1277 MIRN1277|hsa-mir-1277 microRNA 1277 ncRNA chr2-3086 chr2 113791904 113792114 + 15.6 0.000 Intergenic Intergenic -35367 NM_001330316 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr11-2023 chr11 64704862 64705072 + 15.6 0.000 intron (NM_015080, intron 2 of 22) Tigger15a|DNA|TcMar-Tigger 18221 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr8-1071 chr8 118647053 118647263 + 15.6 0.000 intron (NR_038210, intron 2 of 4) intron (NR_038210, intron 2 of 4) -25195 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr11-1841 chr11 75340087 75340297 + 15.6 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) -5006 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr7-1798 chr7 90945530 90945740 + 15.6 0.000 intron (NM_012395, intron 7 of 13) LTR33|LTR|ERVL 235819 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr7-2064 chr7 134888447 134888657 + 15.6 0.000 intron (NM_033157, intron 3 of 14) intron (NM_033157, intron 3 of 14) -2848 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr3-1934 chr3 194685804 194686014 + 15.6 0.000 promoter-TSS (NM_153690) promoter-TSS (NM_153690) 26 NM_153690 131583 Hs.435080 NM_153690 ENSG00000185112 FAM43A - family with sequence similarity 43 member A protein-coding chr7-3353 chr7 93565050 93565260 + 15.6 0.000 intron (NM_001164737, intron 2 of 15) intron (NM_001164737, intron 2 of 15) -5345 NM_001164738 799 Hs.489127 NM_001742 ENSG00000004948 CALCR CRT|CT-R|CTR|CTR1 calcitonin receptor protein-coding chr18-204 chr18 47749262 47749472 + 15.6 0.000 Intergenic Intergenic 181292 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr10-1988 chr10 43304763 43304973 + 15.6 0.000 Intergenic CpG -37803 NM_145313 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr22-1710 chr22 17191355 17191565 + 15.6 0.000 intron (NM_001282229, intron 4 of 8) intron (NM_001282229, intron 4 of 8) 8195 NM_177405 51816 Hs.170310 NM_017424 ENSG00000093072 ADA2 ADGF|CECR1|IDGFL|PAN|SNEDS|VAIHS adenosine deaminase 2 protein-coding chr12-537 chr12 6873164 6873374 + 15.6 0.000 promoter-TSS (NM_032641) promoter-TSS (NM_032641) 34 NM_032641 84727 Hs.479856 NM_032641 ENSG00000111671 SPSB2 GRCC9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding chr6-1640 chr6 121549807 121550017 + 15.6 0.000 Intergenic Intergenic 114266 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr7-1620 chr7 12550968 12551178 + 15.6 0.000 Intergenic MIR|SINE|MIR -19647 NM_001112706 85477 Hs.633359 NM_033128 ENSG00000006747 SCIN - scinderin protein-coding chr19-1600 chr19 27793197 27793407 + 15.6 0.000 promoter-TSS (NR_110688) promoter-TSS (NR_110688) -129 NR_146735 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA chr17-1776 chr17 42459772 42459982 + 15.6 0.000 intron (NM_005177, intron 1 of 20) intron (NM_005177, intron 1 of 20) 999 NM_001130021 535 Hs.463074 NM_005177 ENSG00000033627 ATP6V0A1 ATP6N1|ATP6N1A|Stv1|VPP1|Vph1|a1 ATPase H+ transporting V0 subunit a1 protein-coding chr10-1723 chr10 90742283 90742493 + 15.6 0.000 3' UTR (NM_019859, exon 4 of 4) 3' UTR (NM_019859, exon 4 of 4) 115651 NM_019860 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr9-1234 chr9 134456620 134456830 + 15.6 0.000 Intergenic Intergenic 50165 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr10-2443 chr10 5956675 5956885 + 15.6 0.000 intron (NM_172200, intron 4 of 5) intron (NM_172200, intron 4 of 5) 12148 NM_001351096 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr19-795 chr19 33302495 33302705 + 15.6 0.000 promoter-TSS (NM_001287424) promoter-TSS (NM_001287424) -36 NM_001287435 1050 Hs.76171 NM_004364 ENSG00000245848 CEBPA C/EBP-alpha|CEBP CCAAT enhancer binding protein alpha protein-coding chr13-1224 chr13 76986246 76986456 + 15.6 0.000 Intergenic Intergenic -5730 NM_001366624 1203 Hs.30213 NM_006493 ENSG00000102805 CLN5 - CLN5 intracellular trafficking protein protein-coding chr5-2391 chr5 96177724 96177934 + 15.6 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 98691 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr1-6973 chr1 161779577 161779787 + 15.6 0.000 intron (NM_007348, intron 2 of 15) intron (NM_007348, intron 2 of 15) 13362 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chr3-2863 chr3 42182653 42182863 + 15.6 0.000 intron (NM_001349247, intron 3 of 16) intron (NM_001349247, intron 3 of 16) 22565 NM_014965 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr13-393 chr13 45418395 45418605 + 15.6 0.000 promoter-TSS (NM_001286806) promoter-TSS (NM_001286806) -45 NM_001286806 253512 Hs.591230 NM_001010875 ENSG00000174032 SLC25A30 KMCP1 solute carrier family 25 member 30 protein-coding chr20-325 chr20 33423355 33423565 + 15.6 0.000 intron (NM_003098, intron 2 of 7) intron (NM_003098, intron 2 of 7) 20432 NM_003098 6640 Hs.31121 NM_003098 ENSG00000101400 SNTA1 LQT12|SNT1|TACIP1|dJ1187J4.5 syntrophin alpha 1 protein-coding chr13-797 chr13 101535310 101535520 + 15.6 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 45463 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr21-295 chr21 25506944 25507154 + 15.6 0.000 Intergenic Intergenic -55096 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene ncRNA chr1-2793 chr1 245871984 245872194 + 15.6 0.000 intron (NM_022743, intron 8 of 11) intron (NM_022743, intron 8 of 11) 545323 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr10-2002 chr10 58458120 58458330 + 15.6 0.000 Intergenic Intergenic -54647 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr11-1418 chr11 46561299 46561509 + 15.6 0.000 intron (NM_001267782, intron 1 of 19) AluSx|SINE|Alu 26040 NR_160027 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr15-616 chr15 39271065 39271275 + 15.6 0.000 Intergenic Intergenic 20501 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr12-3138 chr12 42236002 42236212 + 15.6 0.000 intron (NM_001190980, intron 2 of 2) intron (NM_001190980, intron 2 of 2) 2261 NR_135140 10138 Hs.649195 NM_005748 ENSG00000015153 YAF2 - YY1 associated factor 2 protein-coding chr6-1091 chr6 71619896 71620106 + 15.6 0.000 Intergenic Intergenic 198974 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr20-1814 chr20 62842265 62842475 + 15.6 0.000 intron (NM_006602, intron 5 of 5) intron (NM_006602, intron 5 of 5) -2196 NM_080750 100132911 NM_080750 DPH3P1 C20orf143|DPH3B|ZCSL1 diphthamide biosynthesis 3 pseudogene 1 protein-coding chr1-4358 chr1 101174878 101175088 + 15.6 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 61545 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr7-1060 chr7 158668085 158668295 + 15.6 0.000 intron (NM_001281932, intron 14 of 28) intron (NM_001281932, intron 14 of 28) 36614 NM_017760 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr9-2854 chr9 128450883 128451093 + 15.6 0.000 intron (NR_031672, intron 2 of 2).4 intron (NR_031672, intron 2 of 2).4 -4167 NM_153436 4957 Hs.129055 NM_002540 ENSG00000136811 ODF2 CT134|ODF2/1|ODF2/2|ODF84 outer dense fiber of sperm tails 2 protein-coding chr1-2177 chr1 39574331 39574541 + 15.6 0.000 intron (NM_001135654, intron 1 of 14) intron (NM_001135654, intron 1 of 14) 2354 NM_001135653 8761 Hs.169900 NM_003819 ENSG00000090621 PABPC4 APP-1|APP1|PABP4|iPABP poly(A) binding protein cytoplasmic 4 protein-coding chr7-1171 chr7 5665474 5665684 + 15.6 0.000 intron (NR_046834, intron 2 of 2) intron (NR_046834, intron 2 of 2) 14882 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr1-6604 chr1 39174753 39174963 + 15.6 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 90691 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr11-1055 chr11 61153630 61153840 + 15.6 0.000 intron (NM_017966, intron 1 of 4) L1MEc|LINE|L1 7691 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr7-910 chr7 117324456 117324666 + 15.6 0.000 Intergenic CpG-26325 -1503 NM_003391 7472 Hs.567356 NM_003391 ENSG00000105989 WNT2 INT1L1|IRP Wnt family member 2 protein-coding chr4-1626 chr4 74320519 74320729 + 15.6 0.000 Intergenic Intergenic 12154 NM_001270989 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr3-2199 chr3 13038921 13039131 + 15.6 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) 34403 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr3-2979 chr3 80004783 80004993 + 15.6 0.000 Intergenic Intergenic -236890 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr6-1375 chr6 82909305 82909515 + 15.6 0.000 intron (NR_146807, intron 10 of 10) intron (NR_146807, intron 10 of 10) 156431 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr1-6658 chr1 47474496 47474706 + 15.6 0.000 Intergenic Intergenic -37284 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr15-720 chr15 57427702 57427912 + 15.6 0.000 intron (NM_001252335, intron 2 of 19) intron (NM_001252335, intron 2 of 19) 51302 NM_001252335 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr1-1644 chr1 204828463 204828673 + 15.6 0.000 promoter-TSS (NM_001160333) promoter-TSS (NM_001160333) -84 NM_001365986 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr4-543 chr4 82798777 82798987 + 15.6 0.000 promoter-TSS (NM_024906) promoter-TSS (NM_024906) -25 NM_024906 79966 Hs.379191 NM_024906 ENSG00000145284 SCD5 ACOD4|FADS4|HSCD5|SCD2|SCD4 stearoyl-CoA desaturase 5 protein-coding chrX-296 chrX 115650970 115651180 + 15.6 0.000 TTS (NM_005032) TTS (NM_005032) 57524 NM_001172335 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr2-1578 chr2 60516716 60516926 + 15.6 0.000 intron (NM_138559, intron 2 of 4) Plat_L3|LINE|CR1 36677 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr2-1814 chr2 64355106 64355316 + 15.6 0.000 Intergenic Intergenic -14363 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr2-1848 chr2 217929799 217930009 + 15.6 0.000 intron (NM_022648, intron 1 of 32) L2|LINE|L2 -9668 NM_001308023 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr9-1556 chr9 4475392 4475602 + 15.6 0.000 Intergenic L1MC5a|LINE|L1 -14971 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr11-4320 chr11 69699367 69699577 + 15.6 0.000 exon (NM_005117, exon 3 of 3) exon (NM_005117, exon 3 of 3) 4550 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr21-184 chr21 36060345 36060555 + 15.6 0.000 promoter-TSS (NM_017438) promoter-TSS (NM_017438) 76 NM_017438 54093 Hs.606200 NM_017438 ENSG00000185917 SETD4 C21orf18|C21orf27 SET domain containing 4 protein-coding chr1-8596 chr1 182667094 182667304 + 15.6 0.000 intron (NM_033345, intron 2 of 5) intron (NM_033345, intron 2 of 5) 4725 NM_001369564 85397 Hs.20982 NM_033345 ENSG00000135824 RGS8 - regulator of G protein signaling 8 protein-coding chr17-3292 chr17 48223778 48223988 + 15.6 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -67372 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr11-2541 chr11 81005729 81005939 + 15.6 0.000 Intergenic Intergenic -243031 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr13-707 chr13 45258080 45258290 + 15.6 0.000 intron (NM_004128, intron 6 of 7) Charlie7|DNA|hAT-Charlie -57140 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr7-3737 chr7 70504964 70505174 + 15.6 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -627075 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr14-1877 chr14 88183496 88183706 + 15.6 0.000 3' UTR (NM_138318, exon 7 of 7) 3' UTR (NM_138318, exon 7 of 7) 87310 NM_138318 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr19-835 chr19 17292751 17292961 + 15.6 0.000 intron (NM_024527, intron 4 of 4) intron (NM_024527, intron 4 of 4) 10569 NM_024527 79575 Hs.515664 NM_024527 ENSG00000127220 ABHD8 - abhydrolase domain containing 8 protein-coding chr13-461 chr13 29923899 29924109 + 15.6 0.000 intron (NR_047501, intron 1 of 1) intron (NR_047501, intron 1 of 1) 2647 NR_047501 100861573 Hs.585619 NR_047501 ENSG00000224405 LINC00572 - long intergenic non-protein coding RNA 572 ncRNA chr22-1023 chr22 30212822 30213032 + 15.6 0.000 Intergenic UCON132b|DNA|hAT-Tip100 -26267 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr9-1201 chr9 119453814 119454024 + 15.6 0.000 Intergenic Intergenic -84484 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr9-2167 chr9 128117606 128117816 + 15.6 0.000 non-coding (NR_033374, exon 2 of 5) non-coding (NR_033374, exon 2 of 5) 1023 NR_033374 100289019 Hs.693796 NR_033374 SLC25A25-AS1 - SLC25A25 antisense RNA 1 ncRNA chr6-696 chr6 37242617 37242827 + 15.6 0.000 intron (NM_145316, intron 1 of 3) intron (NM_145316, intron 1 of 3) 14877 NM_145316 221468 Hs.520101 NM_145316 ENSG00000172738 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding chr6-1104 chr6 100663218 100663428 + 15.6 0.000 intron (NM_006828, intron 14 of 41) MER44C|DNA|TcMar-Tigger -199648 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr8-1082 chr8 141127429 141127639 + 15.6 0.000 Intergenic Intergenic -1055 NM_001352890 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr5-1134 chr5 98927304 98927514 + 15.6 0.000 promoter-TSS (NM_001270) promoter-TSS (NM_001270) -875 NM_001270 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr14-915 chr14 79578563 79578773 + 15.6 0.000 intron (NR_073547, intron 15 of 20) MER77B|LTR|ERVL 299288 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr4-2243 chr4 155548300 155548510 + 15.6 0.000 Intergenic L1ME4a|LINE|L1 -118305 NM_001130687 2982 Hs.24258 NM_000856 ENSG00000164116 GUCY1A1 GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6 guanylate cyclase 1 soluble subunit alpha 1 protein-coding chr8-2047 chr8 117706700 117706910 + 15.6 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 186092 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr11-2535 chr11 77182297 77182507 + 15.6 0.000 intron (NM_001127180, intron 24 of 48) intron (NM_001127180, intron 24 of 48) 54156 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr11-1371 chr11 75032081 75032291 + 15.6 0.000 Intergenic Intergenic 43253 NM_001367862 10825 Hs.191074 NM_006656 ENSG00000162139 NEU3 SIAL3 neuraminidase 3 protein-coding chr18-469 chr18 45666760 45666970 + 15.6 0.000 intron (NM_007163, intron 12 of 19) intron (NM_007163, intron 12 of 19) 51389 NM_007163 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr3-1651 chr3 145952530 145952740 + 15.6 0.000 Intergenic Intergenic 116550 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr12-2348 chr12 6626357 6626567 + 15.6 0.000 intron (NM_020400, intron 1 of 1) intron (NM_020400, intron 1 of 1) 5187 NM_001142961 57121 Hs.155538 NM_020400 ENSG00000184574 LPAR5 GPR92|GPR93|KPG_010|LPA5 lysophosphatidic acid receptor 5 protein-coding chr6-904 chr6 135012923 135013133 + 15.6 0.000 intron (NM_001363686, intron 4 of 18) intron (NM_001363686, intron 4 of 18) -33596 NR_037435 100500880 NR_037435 ENSG00000283409 MIR3662 mir-3662 microRNA 3662 ncRNA chr4-2177 chr4 105458062 105458272 + 15.6 0.000 intron (NM_176869, intron 1 of 11) L1MD3|LINE|L1 15895 NM_176869 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chrX-342 chrX 9595329 9595539 + 15.6 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 130376 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr8-1713 chr8 126302435 126302645 + 15.6 0.000 Intergenic MIRb|SINE|MIR -22955 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA chrX-197 chrX 49878930 49879140 + 15.6 0.000 promoter-TSS (NM_001145073) promoter-TSS (NM_001145073) 321 NR_026742 158572 Hs.408191 NM_001025449 ENSG00000234390 USP27X-AS1 - USP27X antisense RNA 1 (head to head) ncRNA chr1-2393 chr1 170316214 170316424 + 15.6 0.000 Intergenic Intergenic -32111 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr1-3524 chr1 200795141 200795351 + 15.6 0.000 intron (NM_001297707, intron 2 of 17) intron (NM_001297707, intron 2 of 17) 55674 NM_001297707 23271 Hs.23585 NM_203459 ENSG00000118200 CAMSAP2 CAMSAP1L1 calmodulin regulated spectrin associated protein family member 2 protein-coding chr9-1024 chr9 120571453 120571663 + 15.6 0.000 intron (NR_073558, intron 2 of 37) intron (NR_073558, intron 2 of 37) 8609 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr20-985 chr20 50595147 50595357 + 15.6 0.000 intron (NM_001290268, intron 16 of 21) intron (NM_001290268, intron 16 of 21) 9466 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr10-2051 chr10 90289549 90289759 + 15.6 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 251151 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr6-1956 chr6 130697985 130698195 + 15.6 0.000 Intergenic Intergenic -129315 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr7-947 chr7 93890147 93890357 + 15.6 0.000 promoter-TSS (NR_134235) promoter-TSS (NR_134235) 501 NM_001271004 7980 Hs.438231 NM_006528 ENSG00000105825 TFPI2 PP5|REF1|TFPI-2 tissue factor pathway inhibitor 2 protein-coding chr16-2407 chr16 70725903 70726113 + 15.6 0.000 intron (NM_001351157, intron 13 of 17) intron (NM_001351157, intron 13 of 17) -29087 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr7-1870 chr7 42232279 42232489 + 15.6 0.000 intron (NM_000168, intron 1 of 14) intron (NM_000168, intron 1 of 14) 4825 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr20-1075 chr20 34066653 34066863 + 15.6 0.000 intron (NM_007367, intron 2 of 8) MLT1A0|LTR|ERVL-MaLR 17639 NR_039911 100616434 NR_039911 ENSG00000264616 MIR4755 mir-4755 microRNA 4755 ncRNA chr10-2304 chr10 32881069 32881279 + 15.6 0.000 intron (NM_001321115, intron 43 of 43) intron (NM_001321115, intron 43 of 43) 20298 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr5-1394 chr5 139028003 139028213 + 15.6 0.000 intron (NM_022464, intron 5 of 9) intron (NM_022464, intron 5 of 9) 152708 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr11-1956 chr11 128929876 128930086 + 15.6 0.000 Intergenic Intergenic 7853 NM_001195194 63970 Hs.160953 NM_022112 ENSG00000120471 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding chr10-912 chr10 70653138 70653348 + 15.6 0.000 Intergenic Intergenic -19263 NM_139155 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr1-4928 chr1 44443365 44443575 + 15.6 0.000 intron (NM_001319957, intron 1 of 13) L2|LINE|L2 19469 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr1-4791 chr1 17866533 17866743 + 15.6 0.000 Intergenic Intergenic 111305 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr2-5324 chr2 75985930 75986140 + 15.6 0.000 Intergenic MIR|SINE|MIR -275120 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr15-769 chr15 89090738 89090948 + 15.6 0.000 intron (NM_007011, intron 2 of 14) L3|LINE|CR1 2387 NM_152924 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr5-779 chr5 160230878 160231088 + 15.6 0.000 intron (NM_001040442, intron 3 of 5) MIRc|SINE|MIR 1477 NM_001445 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr1-2616 chr1 92577226 92577436 + 15.6 0.000 intron (NM_001350198, intron 18 of 19) intron (NM_001350198, intron 18 of 19) -90406 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr13-650 chr13 33618871 33619081 + 15.6 0.000 intron (NM_001243476, intron 3 of 17) intron (NM_001243476, intron 3 of 17) 57818 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr20-1415 chr20 34553860 34554070 + 15.6 0.000 intron (NM_181509, intron 2 of 4) L1ME3Cz|LINE|L1 -4753 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr6-742 chr6 16543663 16543873 + 15.6 0.000 intron (NM_000332, intron 5 of 8) intron (NM_000332, intron 5 of 8) 216416 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr16-1421 chr16 11213513 11213723 + 15.6 0.000 Intergenic Intergenic 42564 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr15-1105 chr15 74870530 74870740 + 15.6 0.000 intron (NM_001320778, intron 1 of 9) intron (NM_001320778, intron 1 of 9) 2730 NM_005697 10066 Hs.458917 NM_005697 ENSG00000140497 SCAMP2 - secretory carrier membrane protein 2 protein-coding chr11-1693 chr11 65747351 65747561 + 15.6 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -26518 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr15-1221 chr15 63600273 63600483 + 15.6 0.000 3' UTR (NM_001367808, exon 2 of 2) 3' UTR (NM_001367808, exon 2 of 2) 449 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr1-2655 chr1 178192766 178192976 + 15.6 0.000 intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) 98767 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr4-1717 chr4 182643784 182643994 + 15.6 0.000 intron (NM_001080477, intron 5 of 27) intron (NM_001080477, intron 5 of 27) 273364 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr3-1749 chr3 170523227 170523437 + 15.6 0.000 intron (NM_020949, intron 2 of 7) L2|LINE|L2 56047 NR_135555 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr2-3512 chr2 224518902 224519112 + 15.6 0.000 intron (NM_001257197, intron 2 of 14) intron (NM_001257197, intron 2 of 14) 50948 NM_001257198 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr1-2676 chr1 198220552 198220762 + 15.6 0.000 intron (NM_133494, intron 1 of 9) intron (NM_133494, intron 1 of 9) 63659 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr1-7962 chr1 187876781 187876991 + 15.6 0.000 Intergenic Intergenic 433258 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr15-1084 chr15 47987978 47988188 + 15.6 0.000 Intergenic Intergenic -132907 NM_205850 283652 Hs.710240 NM_205850 ENSG00000188467 SLC24A5 JSX|NCKX5|OCA6|SHEP4 solute carrier family 24 member 5 protein-coding chr1-2421 chr1 2043251 2043461 + 15.6 0.000 Intergenic CpG 6714 NR_135509 105378591 Hs.371879 NR_135509 ENSG00000226969 LOC105378591 - uncharacterized LOC105378591 ncRNA chr7-1770 chr7 66395433 66395643 + 15.6 0.000 intron (NR_026873, intron 3 of 4) AluJb|SINE|Alu 4870 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr13-580 chr13 75771882 75772092 + 15.6 0.000 intron (NM_005358, intron 5 of 29) intron (NM_005358, intron 5 of 29) 11326 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr10-1156 chr10 122051825 122052035 + 15.6 0.000 intron (NM_206861, intron 3 of 19) intron (NM_206861, intron 3 of 19) -60955 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr3-326 chr3 48663953 48664163 + 15.6 0.000 intron (NR_111921, intron 1 of 2) CpG 290 NR_111921 102724368 Hs.663571 NR_111921 ENSG00000228350 LINC02585 CELSR3-AS1 long intergenic non-protein coding RNA 2585 ncRNA chr2-1825 chr2 120134447 120134657 + 15.6 0.000 intron (NM_001330310, intron 18 of 24) L1MA3|LINE|L1 88848 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr11-695 chr11 728019 728229 + 15.6 0.000 TTS (NM_022772) TTS (NM_022772) -19340 NM_006755 6888 Hs.438678 NM_006755 ENSG00000177156 TALDO1 TAL|TAL-H|TALDOR|TALH transaldolase 1 protein-coding chr5-645 chr5 139637548 139637758 + 15.6 0.000 Intergenic CpG -9646 NM_001317201 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr20-605 chr20 58102321 58102531 + 15.6 0.000 Intergenic Intergenic -48476 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr3-1544 chr3 193869827 193870037 + 15.6 0.000 Intergenic CpG -25923 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr1-7066 chr1 183097559 183097769 + 15.6 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 43606 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr7-2870 chr7 116327955 116328165 + 15.6 0.000 Intergenic MIRb|SINE|MIR -41333 NR_130922 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr3-1640 chr3 105598176 105598386 + 15.6 0.000 Intergenic LTR8B|LTR|ERV1 231372 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr4-2070 chr4 18121514 18121724 + 15.6 0.000 Intergenic L2a|LINE|L2 -99744 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr19-2057 chr19 6076711 6076921 + 15.6 0.000 intron (NM_000635, intron 1 of 17) intron (NM_000635, intron 1 of 17) 33684 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr1-647 chr1 26111486 26111696 + 15.6 0.000 promoter-TSS (NM_001243533) promoter-TSS (NM_001243533) -233 NM_152835 149420 Hs.468801 NM_152835 ENSG00000175087 PDIK1L CLIK1L|STK35L2 PDLIM1 interacting kinase 1 like protein-coding chr19-2174 chr19 12977837 12978047 + 15.6 0.000 Intergenic Intergenic 8324 NM_152654 199699 Hs.331981 NM_152654 ENSG00000179284 DAND5 CER2|CERL2|CKTSF1B3|COCO|CRL2|DANTE|GREM3|SP1 DAN domain BMP antagonist family member 5 protein-coding chr17-2969 chr17 64961789 64961999 + 15.6 0.000 Intergenic Intergenic 13691 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo chr16-1038 chr16 59385900 59386110 + 15.6 0.000 Intergenic Intergenic 369186 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr9-2749 chr9 99134971 99135181 + 15.6 0.000 intron (NM_004612, intron 3 of 8) MIRc|SINE|MIR 29963 NM_001130916 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr9-1404 chr9 113437171 113437381 + 15.6 0.000 Intergenic L1M4b|LINE|L1 -7454 NM_144488 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr10-1009 chr10 113854653 113854863 + 15.6 0.000 promoter-TSS (NM_014881) promoter-TSS (NM_014881) 97 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding chr2-1921 chr2 191178928 191179138 + 15.6 0.000 Intergenic Intergenic -27437 NM_001243835 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr8-1365 chr8 122855417 122855627 + 15.6 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 73867 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr10-1080 chr10 14595828 14596038 + 15.6 0.000 intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) 8468 NM_001282696 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr1-2666 chr1 183806225 183806435 + 15.6 0.000 intron (NM_001297671, intron 1 of 17) intron (NM_001297671, intron 1 of 17) 1210 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr10-1788 chr10 79422650 79422860 + 15.6 0.000 intron (NM_153367, intron 2 of 3) intron (NM_153367, intron 2 of 3) 22869 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr16-571 chr16 69565675 69565885 + 15.6 0.000 promoter-TSS (NM_006599) promoter-TSS (NM_006599) 88 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr1-2435 chr1 10046263 10046473 + 15.6 0.000 intron (NM_006048, intron 1 of 26) MLT1J-int|LTR|ERVL-MaLR 13410 NM_006048 10277 Hs.593974 NM_006048 ENSG00000130939 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding chr16-2170 chr16 67386728 67386938 + 15.6 0.000 Intergenic Intergenic 6665 NM_015964 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr7-1122 chr7 668197 668407 + 15.6 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 44222 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr3-877 chr3 185635522 185635732 + 15.6 0.000 Intergenic MER44D|DNA|TcMar-Tigger 49332 NM_021627 59343 Hs.401388 NM_021627 ENSG00000163904 SENP2 AXAM2|SMT3IP2 SUMO specific peptidase 2 protein-coding chr1-3225 chr1 180309334 180309544 + 15.6 0.000 intron (NM_032360, intron 7 of 7) intron (NM_032360, intron 7 of 7) -34758 NR_037642 100527964 Hs.496545 NR_037642 ENSG00000230124 LHX4-AS1 - LHX4 antisense RNA 1 ncRNA chr11-1856 chr11 102705061 102705271 + 15.6 0.000 intron (NM_022122, intron 1 of 9) intron (NM_022122, intron 1 of 9) 603 NM_022122 64066 Hs.534479 NM_022122 ENSG00000137675 MMP27 MMP-27 matrix metallopeptidase 27 protein-coding chr19-938 chr19 36418472 36418682 + 15.6 0.000 promoter-TSS (NM_001321919) promoter-TSS (NM_001321919) 67 NM_001321917 284406 Hs.558734 NM_133466 ENSG00000181007 ZFP82 ZNF545 ZFP82 zinc finger protein protein-coding chr11-1304 chr11 61668223 61668433 + 15.6 0.000 Intergenic Intergenic -12063 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr15-815 chr15 81313132 81313342 + 15.6 0.000 TTS (NM_001352686) TTS (NM_001352686) 10904 NM_181900 80765 Hs.513075 NM_030574 ENSG00000172345 STARD5 - StAR related lipid transfer domain containing 5 protein-coding chr5-2453 chr5 135006960 135007170 + 15.6 0.000 intron (NM_178019, intron 3 of 7) intron (NM_178019, intron 3 of 7) -26209 NR_161235 100996485 NR_161235 C5orf66 - chromosome 5 open reading frame 66 ncRNA KI270442.1-1 KI270442.1 391729 391939 + 15.6 0.000 NA NA NA NA chr20-773 chr20 45358600 45358810 + 15.6 0.000 Intergenic MIRb|SINE|MIR -3244 NM_001197129 90196 Hs.655055 NM_033542 ENSG00000204070 SYS1 C20orf169|dJ453C12.4|dJ453C12.4.1 SYS1 golgi trafficking protein protein-coding chr17-1598 chr17 64261438 64261648 + 15.6 0.000 intron (NM_018469, intron 1 of 11) intron (NM_018469, intron 1 of 11) 1717 NM_001288732 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr2-1445 chr2 237122322 237122532 + 15.6 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 36538 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr17-2730 chr17 75595350 75595560 + 15.6 0.000 intron (NM_001309242, intron 11 of 62) MIRb|SINE|MIR 7397 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr17-1285 chr17 5516178 5516388 + 15.6 0.000 intron (NM_014922, intron 14 of 15) L3|LINE|CR1 -15277 NM_001162371 728392 Hs.104305 NM_001162371 ENSG00000286190 LOC728392 - uncharacterized LOC728392 protein-coding chr12-1326 chr12 62260878 62261088 + 15.6 0.000 TTS (NR_106740) TTS (NR_106740) 579 NM_001351161 9958 Hs.434951 NM_006313 ENSG00000135655 USP15 UNPH-2|UNPH4 ubiquitin specific peptidase 15 protein-coding chr7-642 chr7 39623514 39623724 + 15.6 0.000 promoter-TSS (NM_005402) promoter-TSS (NM_005402) 47 NM_005402 5898 Hs.6906 NM_005402 ENSG00000006451 RALA RAL RAS like proto-oncogene A protein-coding chr16-1820 chr16 48055039 48055249 + 15.6 0.000 Intergenic Intergenic 89455 NR_146502 105371238 Hs.743032 NR_146502 LINC02134 - long intergenic non-protein coding RNA 2134 ncRNA chr2-618 chr2 61177084 61177294 + 15.6 0.000 promoter-TSS (NR_152211) promoter-TSS (NR_152211) -229 NR_152213 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr9-1430 chr9 132999323 132999533 + 15.6 0.000 Intergenic Intergenic 20734 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr22-1347 chr22 24305456 24305666 + 15.6 0.000 intron (NM_015330, intron 3 of 16) L1ME3A|LINE|L1 34730 NM_015330 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr8-699 chr8 38031367 38031577 + 15.6 0.000 intron (NM_004095, intron 1 of 2) intron (NM_004095, intron 1 of 2) 938 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr11-1159 chr11 16613769 16613979 + 15.6 0.000 intron (NM_001367872, intron 2 of 16) CpG 124603 NM_001367872 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr10-1022 chr10 76583795 76584005 + 15.6 0.000 Intergenic HAL1b|LINE|L1 -304144 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr2-3160 chr2 197379547 197379757 + 15.6 0.000 Intergenic Intergenic 55441 NM_001308824 23451 Hs.632554 NM_012433 ENSG00000115524 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b subunit 1 protein-coding chr1-1861 chr1 55062869 55063079 + 15.6 0.000 intron (NM_174936, intron 11 of 11) intron (NM_174936, intron 11 of 11) 22752 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr4-1217 chr4 144005299 144005509 + 15.6 0.000 intron (NM_002100, intron 1 of 4) intron (NM_002100, intron 1 of 4) 13941 NM_001304382 2994 Hs.654368 NM_002100 ENSG00000250361 GYPB CD235b|GPB|GYP|GYPA|MNS|PAS-3|SS glycophorin B (MNS blood group) protein-coding chr19-865 chr19 55207228 55207438 + 15.6 0.000 intron (NM_002842, intron 1 of 19) intron (NM_002842, intron 1 of 19) 2168 NM_001161440 5794 Hs.179770 NM_002842 ENSG00000080031 PTPRH R-PTP-H|SAP1 protein tyrosine phosphatase receptor type H protein-coding chr10-2364 chr10 93512736 93512946 + 15.6 0.000 intron (NM_018131, intron 4 of 8) intron (NM_018131, intron 4 of 8) 16229 NM_018131 55165 Hs.14559 NM_018131 ENSG00000138180 CEP55 C10orf3|CT111|MARCH|URCC6 centrosomal protein 55 protein-coding chr18-329 chr18 14970243 14970453 + 15.6 0.000 non-coding (NR_110783, exon 1 of 2) non-coding (NR_110783, exon 1 of 2) 120 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr16-424 chr16 79770660 79770870 + 15.6 0.000 promoter-TSS (NR_104663) promoter-TSS (NR_104663) -233 NR_104663 102467146 Hs.657587 NR_104663 ENSG00000261390 MAFTRR linc-MAF-4|lincMAF4 MAF transcriptional regulator RNA ncRNA chr17-1059 chr17 50181781 50181991 + 15.6 0.000 Intergenic Intergenic -9410 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr7-3111 chr7 31408328 31408538 + 15.6 0.000 Intergenic Intergenic -67707 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr22-904 chr22 26585189 26585399 + 15.6 0.000 intron (NM_001362923, intron 1 of 7) intron (NM_001362923, intron 1 of 7) 4838 NM_001362923 8459 Hs.632768 NM_003595 ENSG00000128294 TPST2 TANGO13B|TPST-2 tyrosylprotein sulfotransferase 2 protein-coding chr7-2330 chr7 134435312 134435522 + 15.6 0.000 Intergenic MIRb|SINE|MIR 23683 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr20-236 chr20 62143125 62143335 + 15.6 0.000 promoter-TSS (NR_125981) promoter-TSS (NR_125981) 164 NM_002792 5688 Hs.233952 NM_002792 ENSG00000101182 PSMA7 C6|HEL-S-276|HSPC|RC6-1|XAPC7 proteasome subunit alpha 7 protein-coding chr3-4185 chr3 127848133 127848343 + 15.6 0.000 Intergenic Intergenic -24988 NM_001003794 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr11-4111 chr11 35337290 35337500 + 15.6 0.000 intron (NM_001195728, intron 1 of 11) intron (NM_001195728, intron 1 of 11) 82163 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr1-2520 chr1 228903067 228903277 + 15.6 0.000 Intergenic Intergenic 167693 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr10-1144 chr10 73887428 73887638 + 15.6 0.000 Intergenic Intergenic -12942 NM_001320898 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr11-3258 chr11 74394384 74394594 + 15.6 0.000 intron (NM_173582, intron 1 of 13) intron (NM_173582, intron 1 of 13) 3944 NM_173582 283209 Hs.26612 NM_173582 ENSG00000165434 PGM2L1 BM32A|PMMLP phosphoglucomutase 2 like 1 protein-coding chr11-4021 chr11 8863818 8864028 + 15.6 0.000 intron (NM_005418, intron 2 of 22) intron (NM_005418, intron 2 of 22) 47028 NM_005418 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr17-1591 chr17 57918053 57918263 + 15.6 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) -14769 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr5-2417 chr5 112245813 112246023 + 15.6 0.000 intron (NM_001347887, intron 9 of 23) intron (NM_001347887, intron 9 of 23) 17635 NR_110559 101927023 Hs.571002 NR_110559 ENSG00000251076 LOC101927023 - uncharacterized LOC101927023 ncRNA chr9-1235 chr9 134546458 134546668 + 15.6 0.000 Intergenic Intergenic -95242 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr2-2375 chr2 240387898 240388108 + 15.6 0.000 Intergenic Intergenic -47660 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr5-1897 chr5 158287812 158288022 + 15.6 0.000 Intergenic Intergenic 121856 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr12-1247 chr12 31959351 31959561 + 15.6 0.000 promoter-TSS (NM_018169) promoter-TSS (NM_018169) 41 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 RESF1 C12orf35|GET|KIAA1551|UTA2-1 retroelement silencing factor 1 protein-coding chr2-2275 chr2 25279384 25279594 + 15.6 0.000 intron (NR_135490, intron 4 of 23) intron (NR_135490, intron 4 of 23) -27174 NM_153759 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr7-2838 chr7 101532016 101532226 + 15.6 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 36885 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr8-1558 chr8 121240561 121240771 + 15.6 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -398680 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr13-944 chr13 98121949 98122159 + 15.6 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -20535 NM_001286839 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, ARH/RhoGEF and pleckstrin domain protein 1 protein-coding chr1-2201 chr1 63774731 63774941 + 15.6 0.000 intron (NM_005012, intron 1 of 8) CpG 819 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr1-3156 chr1 76670071 76670281 + 15.6 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 109091 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr2-1161 chr2 174682185 174682395 + 15.6 0.000 intron (NM_001077269, intron 1 of 7) CpG 609 NM_001077269 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr2-1021 chr2 19348086 19348296 + 15.6 0.000 promoter-TSS (NR_039914) promoter-TSS (NR_039914) -238 NR_039914 100616307 NR_039914 ENSG00000266738 MIR4757 - microRNA 4757 ncRNA chr11-801 chr11 112074070 112074280 + 15.6 0.000 promoter-TSS (NM_001082969) promoter-TSS (NM_001082969) -4 NM_138789 120379 Hs.420662 NM_138789 ENSG00000150773 PIH1D2 - PIH1 domain containing 2 protein-coding chr7-1235 chr7 137609554 137609764 + 15.6 0.000 intron (NM_001321710, intron 8 of 32) intron (NM_001321710, intron 8 of 32) 236673 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr7-688 chr7 149147171 149147381 + 15.6 0.000 promoter-TSS (NM_170686) promoter-TSS (NM_170686) -177 NM_170686 57541 Hs.632032 NM_020781 ENSG00000197024 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding chr12-963 chr12 1282030 1282240 + 15.6 0.000 intron (NR_027948, intron 14 of 19) intron (NR_027948, intron 14 of 19) -218356 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr1-2271 chr1 223959172 223959382 + 15.6 0.000 intron (NR_132119, intron 7 of 10) MER21C|LTR|ERVL 33367 NR_132119 441124 Hs.520589 NR_132119 GTF2IP20 - general transcription factor IIi pseudogene 20 pseudo chr3-941 chr3 134353395 134353605 + 15.6 0.000 Intergenic Intergenic 14362 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr3-1238 chr3 129304266 129304476 + 15.6 0.000 intron (NM_001370344, intron 6 of 6) intron (NM_001370344, intron 6 of 6) -11900 NR_026991 339942 Hs.450096 NM_001025468 H1FX-AS1 C3orf47 H1FX antisense RNA 1 ncRNA chr18-374 chr18 14971533 14971743 + 15.6 0.000 intron (NR_104164, intron 3 of 3) MLT1G3|LTR|ERVL-MaLR -1170 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr4-2133 chr4 76301325 76301535 + 15.6 0.000 intron (NM_001242939, intron 6 of 6) L1P4|LINE|L1 -4596 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding chr2-1629 chr2 240768182 240768392 + 15.6 0.000 intron (NM_004321, intron 16 of 46) intron (NM_004321, intron 16 of 46) 51932 NM_001320705 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr16-1553 chr16 79648910 79649120 + 15.6 0.000 Intergenic L3|LINE|CR1 -48278 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr11-1999 chr11 46113096 46113306 + 15.4 0.000 intron (NR_147890, intron 1 of 18) intron (NR_147890, intron 1 of 18) 7618 NM_001352029 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chrX-232 chrX 37349540 37349750 + 15.4 0.000 intron (NM_001173490, intron 1 of 3) intron (NM_001173490, intron 1 of 3) 281 NM_000950 5638 Hs.190341 NM_000950 ENSG00000130962 PRRG1 PRGP1 proline rich and Gla domain 1 protein-coding chr5-1517 chr5 144072674 144072884 + 15.4 0.000 Intergenic Intergenic 97880 NM_001271732 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding chr4-671 chr4 94452521 94452731 + 15.4 0.000 intron (NM_001011516, intron 1 of 9) intron (NM_001011516, intron 1 of 9) 684 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr9-1169 chr9 69097156 69097366 + 15.4 0.000 Intergenic Intergenic -24003 NM_001170414 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr1-5532 chr1 208812626 208812836 + 15.4 0.000 Intergenic Intergenic 84043 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr12-1527 chr12 76784782 76784992 + 15.4 0.000 intron (NM_015336, intron 1 of 16) HSMAR2|DNA|TcMar-Mariner 20629 NM_001359626 23390 Hs.4014 NM_015336 ENSG00000186908 ZDHHC17 DHHC-17|HIP14|HIP3|HSPC294|HYPH zinc finger DHHC-type containing 17 protein-coding chr14-1480 chr14 30005316 30005526 + 15.4 0.000 Intergenic Intergenic -77574 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr6-918 chr6 158838198 158838408 + 15.4 0.000 Intergenic Intergenic -18935 NM_001111077 7430 Hs.487027 NM_003379 ENSG00000092820 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding chrX-109 chrX 24149563 24149773 + 15.4 0.000 promoter-TSS (NM_001178085) promoter-TSS (NM_001178085) -14 NR_046657 100873922 Hs.609207 NR_046657 ENSG00000234230 ZFX-AS1 - ZFX antisense RNA 1 ncRNA chr11-1017 chr11 67056862 67057072 + 15.4 0.000 exon (NM_014578, exon 1 of 5) exon (NM_014578, exon 1 of 5) 120 NM_001300886 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr16-1196 chr16 28822741 28822951 + 15.4 0.000 promoter-TSS (NM_145714) promoter-TSS (NM_145714) -202 NM_148414 11273 Hs.460499 NM_007245 ENSG00000168488 ATXN2L A2D|A2LG|A2LP|A2RP ataxin 2 like protein-coding chr2-3281 chr2 30488044 30488254 + 15.4 0.000 intron (NM_001304445, intron 3 of 7) intron (NM_001304445, intron 3 of 7) 40903 NM_001304445 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr13-1036 chr13 75494585 75494795 + 15.4 0.000 Intergenic L2c|LINE|L2 -12521 NM_014832 9882 Hs.210891 NM_014832 ENSG00000136111 TBC1D4 AS160|NIDDM5 TBC1 domain family member 4 protein-coding chr6-466 chr6 152095191 152095401 + 15.4 0.000 intron (NM_001122741, intron 8 of 8) intron (NM_001122741, intron 8 of 8) 72991 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr8-1040 chr8 114904124 114904334 + 15.4 0.000 Intergenic LTR16A2|LTR|ERVL 763784 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr5-1000 chr5 73370600 73370810 + 15.4 0.000 Intergenic Intergenic 32799 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr7-2434 chr7 118152236 118152446 + 15.4 0.000 Intergenic Intergenic -31823 NM_016200 51691 Hs.655046 NM_016200 ENSG00000128534 LSM8 NAA38 LSM8 homolog, U6 small nuclear RNA associated protein-coding chr22-1042 chr22 39277526 39277736 + 15.4 0.000 Intergenic Intergenic -32649 NM_002608 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr8-2845 chr8 130866619 130866829 + 15.4 0.000 intron (NM_001115, intron 9 of 17) MIR|SINE|MIR 174185 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr5-1799 chr5 57895695 57895905 + 15.4 0.000 non-coding (NR_109900, exon 1 of 3) non-coding (NR_109900, exon 1 of 3) 3362 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr12-3411 chr12 107666804 107667014 + 15.4 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -18823 NM_001317963 11137 Hs.506652 NM_007062 ENSG00000136045 PWP1 IEF-SSP-9502 PWP1 homolog, endonuclein protein-coding chr21-214 chr21 27346151 27346361 + 15.4 0.000 Intergenic Intergenic -376123 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr15-1949 chr15 33288144 33288354 + 15.4 0.000 Intergenic THE1C|LTR|ERVL-MaLR 21996 NR_120326 101928134 Hs.133851 NR_120326 ENSG00000259446 LOC101928134 - uncharacterized LOC101928134 ncRNA chrX-325 chrX 23743244 23743454 + 15.4 0.000 promoter-TSS (NM_001033583) promoter-TSS (NM_001033583) -73 NM_001033583 23597 Hs.298885 NM_001033583 ENSG00000123130 ACOT9 ACATE2|CGI-16|MT-ACT48|MTACT48 acyl-CoA thioesterase 9 protein-coding chr4-1438 chr4 100165935 100166145 + 15.4 0.000 Intergenic Intergenic -23993 NR_125924 101929353 Hs.147584 NR_125924 ENSG00000249710 LOC101929353 - uncharacterized LOC101929353 ncRNA chr14-569 chr14 64682214 64682424 + 15.4 0.000 Intergenic Intergenic -22105 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr17-812 chr17 21075545 21075755 + 15.4 0.000 promoter-TSS (NR_110895) promoter-TSS (NR_110895) 94 NR_110895 101060544 Hs.585812 NR_110895 ENSG00000236819 LINC01563 HP08942 long intergenic non-protein coding RNA 1563 ncRNA chr18-195 chr18 59502734 59502944 + 15.4 0.000 intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) -143574 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr2-2395 chr2 19021114 19021324 + 15.4 0.000 intron (NR_135287, intron 2 of 3) LTR67B|LTR|ERVL 5752 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr3-1369 chr3 46556751 46556961 + 15.4 0.000 promoter-TSS (NR_073385) promoter-TSS (NR_073385) -542 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr22-1263 chr22 27347864 27348074 + 15.4 0.000 Intergenic Intergenic 37318 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr8-789 chr8 87938147 87938357 + 15.4 0.000 Intergenic LTR23|LTR|ERV1 -64237 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr9-1525 chr9 124621736 124621946 + 15.4 0.000 intron (NM_033334, intron 2 of 9) intron (NM_033334, intron 2 of 9) -36595 NR_038975 100379345 Hs.660412 NR_038975 ENSG00000224020 MIR181A2HG - MIR181A2 host gene ncRNA chr10-1607 chr10 58705083 58705293 + 15.4 0.000 intron (NM_001080512, intron 3 of 20) intron (NM_001080512, intron 3 of 20) -9827 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr1-2429 chr1 7552512 7552722 + 15.4 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -117113 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr6-1388 chr6 110876200 110876410 + 15.4 0.000 intron (NM_001287216, intron 1 of 4) CpG 1521 NM_001287216 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr22-785 chr22 45670492 45670702 + 15.4 0.000 Intergenic AluJb|SINE|Alu -1201 NM_001167621 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr14-1134 chr14 104743297 104743507 + 15.4 0.000 intron (NM_199165, intron 10 of 12) intron (NM_199165, intron 10 of 12) -9745 NM_021709 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr9-1384 chr9 80435639 80435849 + 15.4 0.000 Intergenic Intergenic 460721 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr12-1663 chr12 53472917 53473127 + 15.4 0.000 intron (NM_001128912, intron 14 of 14) AluSz|SINE|Alu 8554 NR_109828 102157401 NR_109828 ENSG00000282977 PCBP2-OT1 TUC.338|TUC338|uc.338 PCBP2 overlapping transcript 1 ncRNA chr22-428 chr22 38418167 38418377 + 15.4 0.000 Intergenic Intergenic -19346 NR_002821 400927 Hs.720223 NR_002821 TPTEP2 Z98749.2 TPTE pseudogene 2 pseudo chr1-3456 chr1 32222468 32222678 + 15.4 0.000 promoter-TSS (NR_133635) promoter-TSS (NR_133635) -202 NR_133636 56063 Hs.272299 NM_019118 ENSG00000160055 TMEM234 AASL548|C1orf91|PRO1105|RP4-622L5|dJ622L5.7 transmembrane protein 234 protein-coding chr15-1607 chr15 80423314 80423524 + 15.4 0.000 intron (NM_014862, intron 1 of 18) intron (NM_014862, intron 1 of 18) 19037 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr6-1818 chr6 143556634 143556844 + 15.4 0.000 intron (NR_027113, intron 2 of 2) HSATI|Satellite|Satellite 5312 NR_110149 285740 Hs.432656 NR_027113 ENSG00000235740 PHACTR2-AS1 - PHACTR2 antisense RNA 1 ncRNA chr19-1924 chr19 2415724 2415934 + 15.4 0.000 exon (NM_182973, exon 10 of 17) exon (NM_182973, exon 10 of 17) 11757 NM_012458 26517 Hs.75056 NM_012458 ENSG00000099800 TIMM13 TIM13|TIM13B|TIMM13A|TIMM13B|ppv1 translocase of inner mitochondrial membrane 13 protein-coding chr4-963 chr4 23888993 23889203 + 15.4 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) 949 NR_148984 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr1-3943 chr1 100036891 100037101 + 15.4 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -1099 NM_033055 64645 Hs.124156 NM_033055 ENSG00000156875 MFSD14A HIAT1 major facilitator superfamily domain containing 14A protein-coding chr2-1967 chr2 10936314 10936524 + 15.4 0.000 Intergenic Intergenic 24485 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr1-2702 chr1 221887116 221887326 + 15.4 0.000 Intergenic Intergenic -46555 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr18-621 chr18 9771461 9771671 + 15.4 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 63265 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr3-2785 chr3 194586977 194587187 + 15.4 0.000 TTS (NM_001166306) TTS (NM_001166306) 2814 NR_047574 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr15-1376 chr15 89401839 89402049 + 15.4 0.000 intron (NR_160724, intron 1 of 2) intron (NR_160724, intron 1 of 2) 1773 NR_160724 105371031 NR_160724 LOC105371031 - uncharacterized LOC105371031 ncRNA chr10-1397 chr10 76118390 76118600 + 15.4 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 335734 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr5-1518 chr5 149666416 149666626 + 15.4 0.000 Intergenic Intergenic -63789 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr14-1452 chr14 100303035 100303245 + 15.4 0.000 intron (NM_001352821, intron 1 of 4) L1MEj|LINE|L1 3304 NM_001291813 123096 Hs.578109 NM_152333 ENSG00000197119 SLC25A29 C14orf69|CACL|ORNT3 solute carrier family 25 member 29 protein-coding chr15-698 chr15 59339467 59339677 + 15.4 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 33299 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr1-1189 chr1 37946922 37947132 + 15.4 0.000 promoter-TSS (NR_158628) promoter-TSS (NR_158628) 26 NM_005540 3633 Hs.449942 NM_005540 ENSG00000204084 INPP5B 5PTase inositol polyphosphate-5-phosphatase B protein-coding chr4-2065 chr4 17055886 17056096 + 15.4 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 130066 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr1-3944 chr1 100188679 100188889 + 15.4 0.000 3' UTR (NM_001918, exon 11 of 11) 3' UTR (NM_001918, exon 11 of 11) -10511 NM_001256385 127495 Hs.44277 NM_144620 ENSG00000122477 LRRC39 - leucine rich repeat containing 39 protein-coding chr12-988 chr12 107318468 107318678 + 15.4 0.000 5' UTR (NM_001347943, exon 1 of 15) 5' UTR (NM_001347943, exon 1 of 15) 139 NM_001018072 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr2-4117 chr2 153085574 153085784 + 15.4 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 367042 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr16-1561 chr16 84200365 84200575 + 15.4 0.000 Intergenic Intergenic -3417 NR_147175 654780 Hs.8977 NM_001039504 ENSG00000250685 LOC654780 SFPQ splicing factor proline/glutamine-rich ncRNA chr5-1630 chr5 127358905 127359115 + 15.4 0.000 intron (NM_001308121, intron 4 of 13) intron (NM_001308121, intron 4 of 13) 68214 NM_001256545 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr19-1613 chr19 43077948 43078158 + 15.4 0.000 intron (NM_031246, intron 2 of 5) intron (NM_031246, intron 2 of 5) 4648 NM_031246 5670 Hs.709200 NM_031246 ENSG00000242221 PSG2 CEA|PSBG2|PSG1 pregnancy specific beta-1-glycoprotein 2 protein-coding chr19-1240 chr19 42386939 42387149 + 15.4 0.000 TTS (NM_032488) TTS (NM_032488) 3253 NM_032488 84518 Hs.148590 NM_032488 ENSG00000105427 CNFN PLAC8L2 cornifelin protein-coding chr11-1255 chr11 114762524 114762734 + 15.4 0.000 Intergenic Intergenic 84102 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr10-1010 chr10 114821736 114821946 + 15.4 0.000 promoter-TSS (NM_020940) promoter-TSS (NM_020940) 61 NM_020940 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding chr5-917 chr5 118581102 118581312 + 15.4 0.000 Intergenic Intergenic -14981 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chr7-1172 chr7 6158867 6159077 + 15.4 0.000 intron (NM_032172, intron 16 of 17) CpG 13165 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chrX-753 chrX 18758672 18758882 + 15.4 0.000 intron (NM_152226, intron 8 of 17) intron (NM_152226, intron 8 of 17) -66090 NR_046642 100874004 NR_046642 PPEF1-AS1 - PPEF1 antisense RNA 1 ncRNA chr17-1704 chr17 42698887 42699097 + 15.4 0.000 3' UTR (NM_003632, exon 24 of 24) 3' UTR (NM_003632, exon 24 of 24) 9159 NR_106838 102466195 NR_106838 ENSG00000275273 MIR6780A hsa-mir-6780a microRNA 6780a ncRNA chr4-1309 chr4 128241391 128241601 + 15.4 0.000 Intergenic Intergenic 46317 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chr13-618 chr13 35552089 35552299 + 15.4 0.000 intron (NM_001204197, intron 3 of 17) L2c|LINE|L2 75445 NM_001204197 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr5-1224 chr5 138875576 138875786 + 15.4 0.000 promoter-TSS (NM_015564) promoter-TSS (NM_015564) 281 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr16-1088 chr16 70653956 70654166 + 15.4 0.000 intron (NM_152456, intron 2 of 6) intron (NM_152456, intron 2 of 6) 30069 NM_001172772 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr11-1912 chr11 65219826 65220036 + 15.4 0.000 intron (NR_033396, intron 3 of 9) L2a|LINE|L2 6091 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr3-2229 chr3 39155810 39156020 + 15.4 0.000 Intergenic Intergenic -1274 NM_001320560 64651 Hs.370950 NM_033027 ENSG00000144655 CSRNP1 AXUD1|CSRNP-1|FAM130B|TAIP-3|URAX1 cysteine and serine rich nuclear protein 1 protein-coding chr8-1052 chr8 20113944 20114154 + 15.4 0.000 Intergenic Intergenic 69087 NM_003053 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr20-1674 chr20 33972283 33972493 + 15.4 0.000 Intergenic AluSz6|SINE|Alu -21523 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr1-1321 chr1 154608252 154608462 + 15.4 0.000 promoter-TSS (NM_015840) promoter-TSS (NM_015840) -171 NM_001365047 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr16-1178 chr16 88691496 88691706 + 15.4 0.000 Intergenic Intergenic -5094 NM_178310 333929 Hs.673548 NM_178310 ENSG00000185669 SNAI3 SMUC|SNAIL3|ZNF293|Zfp293 snail family transcriptional repressor 3 protein-coding chr14-446 chr14 57390485 57390695 + 15.4 0.000 promoter-TSS (NM_001011713) promoter-TSS (NM_001011713) 4 NM_001011713 122830 Hs.165465 NM_001011713 ENSG00000139977 NAA30 C14orf35|MAK3|Mak3p|NAT12|NAT12P N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding chr22-458 chr22 41393234 41393444 + 15.4 0.000 intron (NM_003216, intron 2 of 3) AluJb|SINE|Alu 11397 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr7-1353 chr7 51162885 51163095 + 15.4 0.000 intron (NM_015198, intron 5 of 12) Kanga1|DNA|TcMar-Tc2 153819 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr3-2232 chr3 42091205 42091415 + 15.4 0.000 promoter-TSS (NM_001265608) promoter-TSS (NM_001265608) -47 NM_001042646 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr2-2528 chr2 189726402 189726612 + 15.4 0.000 intron (NM_144708, intron 12 of 22) L1MC4|LINE|L1 -36273 NR_102429 101409258 Hs.738558 NR_102429 OSGEPL1-AS1 - OSGEPL1 antisense RNA 1 ncRNA chr2-2224 chr2 161045795 161046005 + 15.4 0.000 Intergenic MamTip3|DNA|hAT-Tip100 -91055 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr12-2148 chr12 110024909 110025119 + 15.4 0.000 intron (NM_033121, intron 7 of 14) intron (NM_033121, intron 7 of 14) 23633 NR_148516 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr6-3069 chr6 73878091 73878301 + 15.4 0.000 Intergenic Intergenic 181993 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr9-2604 chr9 6336327 6336537 + 15.4 0.000 Intergenic L1PA5|LINE|L1 8057 NM_001001874 89882 Hs.351815 NM_033516 ENSG00000170777 TPD52L3 D55|NYDSP25|hD55 TPD52 like 3 protein-coding chr11-2664 chr11 64847327 64847537 + 15.4 0.000 Intergenic MIRc|SINE|MIR -2779 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr9-986 chr9 136010209 136010419 + 15.4 0.000 3' UTR (NM_144653, exon 6 of 6) 3' UTR (NM_144653, exon 6 of 6) -48941 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr10-2005 chr10 58734061 58734271 + 15.4 0.000 intron (NM_001080512, intron 3 of 20) OldhAT1|DNA|hAT-Ac 19151 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr4-1050 chr4 73868899 73869109 + 15.4 0.000 promoter-TSS (NM_001511) promoter-TSS (NM_001511) -389 NR_046035 2919 Hs.789 NM_001511 ENSG00000163739 CXCL1 FSP|GRO1|GROa|MGSA|MGSA-a|NAP-3|SCYB1 C-X-C motif chemokine ligand 1 protein-coding chr3-1700 chr3 40971646 40971856 + 15.4 0.000 Intergenic Intergenic -227754 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr19-1051 chr19 58562715 58562925 + 15.4 0.000 exon (NM_003422, exon 6 of 6) exon (NM_003422, exon 6 of 6) 3634 NR_027334 100131691 Hs.743767 NR_027334 ENSG00000267858 MZF1-AS1 - MZF1 antisense RNA 1 ncRNA chr6-1056 chr6 10999996 11000206 + 15.4 0.000 exon (NM_017770, exon 4 of 8) exon (NM_017770, exon 4 of 8) -43657 NR_038963 100506409 Hs.43818 NR_038962 ELOVL2-AS1 - ELOVL2 antisense RNA 1 ncRNA chr22-364 chr22 27810778 27810988 + 15.4 0.000 Intergenic Intergenic -9127 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr7-600 chr7 101085449 101085659 + 15.4 0.000 promoter-TSS (NM_030961) promoter-TSS (NM_030961) 73 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding chr10-1677 chr10 126013547 126013757 + 15.4 0.000 3' UTR (NM_001288973, exon 23 of 23) 3' UTR (NM_001288973, exon 23 of 23) -40379 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr3-1944 chr3 197029924 197030134 + 15.4 0.000 promoter-TSS (NM_033316) promoter-TSS (NM_033316) -212 NM_033316 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chr2-3254 chr2 239655563 239655773 + 15.4 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -107192 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr4-430 chr4 105473401 105473611 + 15.4 0.000 intron (NM_176869, intron 1 of 11) CpG 556 NM_176869 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chr11-2185 chr11 9914275 9914485 + 15.4 0.000 intron (NM_030962, intron 16 of 39) L1MC|LINE|L1 75238 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr11-1681 chr11 47269093 47269303 + 15.4 0.000 promoter-TSS (NM_130471) promoter-TSS (NM_130471) -177 NM_130470 8567 Hs.82548 NM_003682 ENSG00000110514 MADD DENN|IG20|RAB3GEP MAP kinase activating death domain protein-coding chr7-3376 chr7 105760377 105760587 + 15.4 0.000 3' UTR (NM_152749, exon 4 of 4) 3' UTR (NM_152749, exon 4 of 4) -81320 NM_138495 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr11-957 chr11 62839442 62839652 + 15.4 0.000 promoter-TSS (NM_001369450) promoter-TSS (NM_001369450) 43 NM_001369447 54663 Hs.654620 NM_018093 ENSG00000133316 WDR74 Nsa1 WD repeat domain 74 protein-coding chr3-1447 chr3 41203056 41203266 + 15.4 0.000 intron (NM_001904, intron 1 of 14) intron (NM_001904, intron 1 of 14) 3656 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr17-1749 chr17 3731151 3731361 + 15.4 0.000 intron (NM_002208, intron 22 of 30) intron (NM_002208, intron 22 of 30) 7353 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr10-1287 chr10 32377564 32377774 + 15.4 0.000 intron (NM_001282391, intron 1 of 13) intron (NM_001282391, intron 1 of 13) 1100 NM_001282391 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr17-2258 chr17 17043146 17043356 + 15.4 0.000 intron (NM_201274, intron 1 of 23) intron (NM_201274, intron 1 of 23) 491 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr14-576 chr14 94602000 94602210 + 15.4 0.000 Intergenic Intergenic -10286 NM_001085 12 Hs.534293 NM_001085 ENSG00000196136 SERPINA3 AACT|ACT|GIG24|GIG25 serpin family A member 3 protein-coding chr7-1264 chr7 77933545 77933755 + 15.4 0.000 intron (NM_001366082, intron 10 of 11) L2|LINE|L2 93520 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr7-708 chr7 18793114 18793324 + 15.4 0.000 intron (NM_058176, intron 15 of 22) intron (NM_058176, intron 15 of 22) 283949 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr7-1692 chr7 151494477 151494687 + 15.4 0.000 intron (NM_005614, intron 1 of 7) intron (NM_005614, intron 1 of 7) 25313 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr19-757 chr19 4051909 4052119 + 15.4 0.000 intron (NM_015898, intron 2 of 2) intron (NM_015898, intron 2 of 2) 13515 NM_001317990 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr1-1578 chr1 25707954 25708164 + 15.4 0.000 intron (NM_020379, intron 2 of 11) MER41B|LTR|ERV1 90591 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr22-1022 chr22 29842899 29843109 + 15.4 0.000 Intergenic Intergenic -4730 NM_001369922 84164 Hs.731754 NM_032204 ENSG00000100325 ASCC2 ASC1p100|p100 activating signal cointegrator 1 complex subunit 2 protein-coding chr14-1071 chr14 101017320 101017530 + 15.4 0.000 Intergenic Intergenic -4641 NR_029871 494328 NR_029871 ENSG00000199088 MIR379 MIRN379|hsa-mir-379|mir-379 microRNA 379 ncRNA chr13-602 chr13 90622664 90622874 + 15.4 0.000 Intergenic Intergenic 129481 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr13-638 chr13 110593506 110593716 + 15.4 0.000 Intergenic Intergenic -21849 NM_001242883 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr20-358 chr20 62972463 62972673 + 15.4 0.000 Intergenic CpG 19859 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr20-1017 chr20 6704261 6704471 + 15.4 0.000 Intergenic MER134|DNA?|DNA? 31770 NR_146909 105372516 Hs.580741 NR_146909 LINC01713 - long intergenic non-protein coding RNA 1713 ncRNA chr20-1111 chr20 7090926 7091136 + 15.4 0.000 Intergenic LTR41B|LTR|ERVL 163171 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA chr9-1392 chr9 94922436 94922646 + 15.4 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 23013 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr14-2087 chr14 71711530 71711740 + 15.4 0.000 intron (NM_001354286, intron 18 of 24) intron (NM_001354286, intron 18 of 24) 125337 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr19-1943 chr19 18848164 18848374 + 15.4 0.000 intron (NM_002911, intron 3 of 23) intron (NM_002911, intron 3 of 23) 16310 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr8-831 chr8 80727581 80727791 + 15.4 0.000 intron (NM_001033723, intron 2 of 8) intron (NM_001033723, intron 2 of 8) 146782 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr3-1689 chr3 24365249 24365459 + 15.4 0.000 intron (NM_001354709, intron 1 of 10) intron (NM_001354709, intron 1 of 10) -128733 NR_046244 644990 Hs.631912 NR_046244 THRB-AS1 - THRB antisense RNA 1 ncRNA chr3-1591 chr3 160260859 160261069 + 15.4 0.000 intron (NM_001190242, intron 18 of 18) L2c|LINE|L2 35328 NM_001168214 401097 Hs.729755 NM_001168214 ENSG00000180044 C3orf80 - chromosome 3 open reading frame 80 protein-coding chr3-1401 chr3 124620711 124620921 + 15.4 0.000 intron (NM_007064, intron 1 of 26) intron (NM_007064, intron 1 of 26) 36157 NM_001322994 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr4-1374 chr4 77043954 77044164 + 15.4 0.000 Intergenic Intergenic 30851 NM_001348133 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr7-1231 chr7 132066428 132066638 + 15.4 0.000 Intergenic Intergenic 156313 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr11-1671 chr11 12457272 12457482 + 15.4 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 79806 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr17-422 chr17 78802116 78802326 + 15.4 0.000 intron (NM_001321291, intron 17 of 20) CpG -19879 NM_004762 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr18-283 chr18 39835746 39835956 + 15.4 0.000 Intergenic Intergenic -5858 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr11-1136 chr11 70203206 70203416 + 15.4 0.000 5' UTR (NM_003824, exon 1 of 2) 5' UTR (NM_003824, exon 1 of 2) 148 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr15-250 chr15 91853370 91853580 + 15.4 0.000 promoter-TSS (NM_001145044) promoter-TSS (NM_001145044) -233 NM_013272 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr5-2303 chr5 55480800 55481010 + 15.4 0.000 intron (NM_003711, intron 1 of 5) intron (NM_003711, intron 1 of 5) 28021 NR_049869 100847019 NR_049869 ENSG00000265135 MIR5687 - microRNA 5687 ncRNA chr1-3662 chr1 110034348 110034558 + 15.4 0.000 promoter-TSS (NM_033088) promoter-TSS (NM_033088) -148 NR_073071 85369 Hs.584996 NM_033088 ENSG00000143093 STRIP1 FAM40A|FAR11A striatin interacting protein 1 protein-coding chr4-2843 chr4 52914064 52914274 + 15.4 0.000 intron (NM_152540, intron 6 of 8) LTR87|LTR|ERVL? 51852 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr15-472 chr15 79682779 79682989 + 15.4 0.000 Intergenic Intergenic 214113 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chrX-1026 chrX 70414292 70414502 + 15.4 0.000 intron (NM_012310, intron 28 of 30) L3|LINE|CR1 -8634 NM_001171193 54857 Hs.438712 NM_017711 ENSG00000130055 GDPD2 GDE3|OBDPF glycerophosphodiester phosphodiesterase domain containing 2 protein-coding chr1-4255 chr1 245109118 245109328 + 15.4 0.000 intron (NM_001143943, intron 6 of 6) intron (NM_001143943, intron 6 of 6) -45762 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr4-1382 chr4 109548682 109548892 + 15.4 0.000 Intergenic MSTA|LTR|ERVL-MaLR -11459 NM_017918 55013 Hs.234149 NM_017918 ENSG00000005059 MCUB CCDC109B mitochondrial calcium uniporter dominant negative beta subunit protein-coding chr9-848 chr9 136980437 136980647 + 15.4 0.000 intron (NM_000954, intron 5 of 6) intron (NM_000954, intron 5 of 6) -2451 NM_207510 401562 Hs.695210 NM_207510 ENSG00000214402 LCNL1 - lipocalin like 1 protein-coding chr9-1707 chr9 100111214 100111424 + 15.4 0.000 intron (NR_134606, intron 2 of 16) intron (NR_134606, intron 2 of 16) 12076 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding chr19-2256 chr19 52602140 52602350 + 15.4 0.000 Intergenic Intergenic 5561 NR_023311 7696 Hs.373648 NM_003438 ZNF137P ZNF137|pHZ-30 zinc finger protein 137, pseudogene pseudo chr5-559 chr5 1511990 1512200 + 15.4 0.000 intron (NM_024830, intron 1 of 13) intron (NM_024830, intron 1 of 13) -1239 NR_106723 102466103 NR_106723 ENSG00000273742 MIR6075 hsa-mir-6075 microRNA 6075 ncRNA chr3-1789 chr3 25493890 25494100 + 15.4 0.000 intron (NR_110892, intron 2 of 6) L3b|LINE|CR1 35685 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr13-678 chr13 113849656 113849866 + 15.4 0.000 intron (NM_000820, intron 2 of 14) intron (NM_000820, intron 2 of 14) 14315 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr16-1105 chr16 87854128 87854338 + 15.4 0.000 TTS (NR_162122) TTS (NR_162122) 337 NR_162122 113218509 NR_162122 MIR11401 - microRNA 11401 ncRNA chr11-4497 chr11 112876365 112876575 + 15.4 0.000 Intergenic Intergenic -84950 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr5-1062 chr5 150489865 150490075 + 15.4 0.000 Intergenic Intergenic -3978 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chrX-645 chrX 46642180 46642390 + 15.4 0.000 intron (NM_001257291, intron 12 of 16) intron (NM_001257291, intron 12 of 16) 68520 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chr2-3540 chr2 9897455 9897665 + 15.4 0.000 intron (NM_001318977, intron 7 of 13) intron (NM_001318977, intron 7 of 13) 54086 NM_005680 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr1-2900 chr1 6819934 6820144 + 15.4 0.000 intron (NM_001349627, intron 2 of 3) L1MC4|LINE|L1 34585 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr8-473 chr8 48581309 48581519 + 15.4 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 29847 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr1-3595 chr1 19012162 19012372 + 15.4 0.000 Intergenic Intergenic -55591 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr14-1892 chr14 96457570 96457780 + 15.4 0.000 intron (NM_001350890, intron 11 of 16) intron (NM_001350890, intron 11 of 16) 44651 NR_122121 730202 Hs.647565 NR_122121 LOC730202 - uncharacterized LOC730202 ncRNA chr8-1969 chr8 69080362 69080572 + 15.4 0.000 intron (NR_039986, intron 1 of 4) intron (NR_039986, intron 1 of 4) 23723 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr1-1269 chr1 32500609 32500819 + 15.4 0.000 Intergenic CpG 35642 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr7-2214 chr7 115471942 115472152 + 15.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 109394 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr3-998 chr3 45011047 45011257 + 15.4 0.000 intron (NR_023353, intron 5 of 6) intron (NR_023353, intron 5 of 6) -15151 NM_003278 7123 Hs.476092 NM_003278 ENSG00000163815 CLEC3B TN|TNA C-type lectin domain family 3 member B protein-coding chr5-785 chr5 82171 82381 + 15.4 0.000 Intergenic Intergenic -9892 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr7-2809 chr7 92723176 92723386 + 15.4 0.000 intron (NM_001259, intron 4 of 7) L2c|LINE|L2 110678 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr1-576 chr1 228182389 228182599 + 15.4 0.000 TTS (NM_001010867) TTS (NM_001010867) 7924 NM_001310327 200205 Hs.237017 NM_001010867 ENSG00000181873 IBA57 C1orf69|MMDS3|SPG74 iron-sulfur cluster assembly factor IBA57 protein-coding chr6-1416 chr6 139060478 139060688 + 15.4 0.000 Intergenic Intergenic 31838 NM_021243 58527 Hs.600861 NM_021243 ENSG00000146386 ABRACL C6orf115|Costars|HSPC280|PRO2013 ABRA C-terminal like protein-coding chr3-2585 chr3 128486736 128486946 + 15.4 0.000 exon (NM_001145661, exon 3 of 7) exon (NM_001145661, exon 3 of 7) 1080 NM_001145662 2624 Hs.367725 NM_032638 ENSG00000179348 GATA2 DCML|IMD21|MONOMAC|NFE1B GATA binding protein 2 protein-coding chr2-739 chr2 219460579 219460789 + 15.4 0.000 promoter-TSS (NM_001173476) promoter-TSS (NM_001173476) -128 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr1-1972 chr1 168439884 168440094 + 15.4 0.000 Intergenic Intergenic -17333 NR_037851 100505918 Hs.568494 NR_037851 LOC100505918 - uncharacterized LOC100505918 ncRNA chr17-2736 chr17 76815017 76815227 + 15.4 0.000 Intergenic Intergenic 16078 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr4-1287 chr4 84682021 84682231 + 15.4 0.000 intron (NM_014991, intron 64 of 67) intron (NM_014991, intron 64 of 67) 98999 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr12-1752 chr12 67327019 67327229 + 15.4 0.000 Intergenic L2a|LINE|L2 57766 NM_001329675 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr1-3241 chr1 198809375 198809585 + 15.4 0.000 intron (NR_040073, intron 2 of 2) intron (NR_040073, intron 2 of 2) 49502 NR_029612 406955 NR_029612 ENSG00000207975 MIR181B1 MIRN181B1|mir-181b-1 microRNA 181b-1 ncRNA chr8-566 chr8 92051613 92051823 + 15.4 0.000 intron (NM_001198633, intron 1 of 10) intron (NM_001198633, intron 1 of 10) 10916 NM_004349 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr1-3950 chr1 110380726 110380936 + 15.4 0.000 intron (NM_004696, intron 5 of 8) intron (NM_004696, intron 5 of 8) 10195 NM_001201549 9122 Hs.351306 NM_004696 ENSG00000168679 SLC16A4 MCT4|MCT5 solute carrier family 16 member 4 protein-coding chrX-297 chrX 117024762 117024972 + 15.4 0.000 Intergenic L1PA15|LINE|L1 -207007 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr20-503 chr20 37693655 37693865 + 15.4 0.000 promoter-TSS (NM_030877) promoter-TSS (NM_030877) -195 NM_001281495 56259 Hs.472667 NM_030877 ENSG00000132792 CTNNBL1 C20orf33|NAP|P14L|PP8304|dJ633O20.1 catenin beta like 1 protein-coding chr3-1708 chr3 50208816 50209026 + 15.4 0.000 intron (NM_006841, intron 1 of 15) intron (NM_006841, intron 1 of 15) 3650 NM_006841 10991 Hs.76460 NM_006841 ENSG00000188338 SLC38A3 G17|NAT1|SN1|SNAT3 solute carrier family 38 member 3 protein-coding chr21-403 chr21 41360482 41360692 + 15.4 0.000 Intergenic Intergenic -1440 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding chrX-537 chrX 105116629 105116839 + 15.4 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 103959 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr6-1954 chr6 130453395 130453605 + 15.4 0.000 Intergenic Intergenic 16383 NM_052913 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr3-1792 chr3 31960042 31960252 + 15.4 0.000 intron (NM_001174060, intron 1 of 10) intron (NM_001174060, intron 1 of 10) -21603 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr12-3142 chr12 43272316 43272526 + 15.4 0.000 Intergenic Intergenic 117106 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr11-2219 chr11 65089289 65089499 + 15.4 0.000 promoter-TSS (NM_001242631) promoter-TSS (NM_001242631) -285 NM_001282448 100130348 Hs.98170 NM_001242631 ENSG00000187066 TMEM262 - transmembrane protein 262 protein-coding chr6-547 chr6 160139492 160139702 + 15.4 0.000 intron (NM_153187, intron 6 of 9) (T)n|Simple_repeat|Simple_repeat 17766 NM_153187 6580 Hs.117367 NM_003057 ENSG00000175003 SLC22A1 HOCT1|OCT1|oct1_cds solute carrier family 22 member 1 protein-coding chr21-115 chr21 46098117 46098327 + 15.4 0.000 intron (NM_058174, intron 1 of 27) CpG 103 NM_058175 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr2-947 chr2 11746669 11746879 + 15.4 0.000 intron (NM_001349203, intron 1 of 20) CpG 142 NM_001349199 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr8-898 chr8 58098175 58098385 + 15.4 0.000 intron (NM_147189, intron 4 of 4) L1PA7|LINE|L1 103757 NM_147189 90362 Hs.154652 NM_147189 ENSG00000169122 FAM110B C8orf72 family with sequence similarity 110 member B protein-coding chr14-1425 chr14 71321056 71321266 + 15.4 0.000 5' UTR (NM_001354287, exon 2 of 24) 5' UTR (NM_001354287, exon 2 of 24) 685 NM_001354285 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr1-1684 chr1 150010565 150010775 + 15.4 0.000 promoter-TSS (NM_020205) promoter-TSS (NM_020205) 56 NM_020205 56957 Hs.98322 NM_020205 ENSG00000264522 OTUD7B CEZANNE|ZA20D1 OTU deubiquitinase 7B protein-coding chr20-386 chr20 62156891 62157101 + 15.4 0.000 intron (NR_125980, intron 2 of 12) intron (NR_125980, intron 2 of 12) 13227 NR_125980 26039 Hs.154429 NM_015558 ENSG00000184402 SS18L1 CREST|LP2261 SS18L1 subunit of BAF chromatin remodeling complex protein-coding chr16-2569 chr16 79839964 79840174 + 15.4 0.000 Intergenic Intergenic 44820 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr21-269 chr21 15015940 15016150 + 15.4 0.000 intron (NM_003489, intron 2 of 3) intron (NM_003489, intron 2 of 3) 48955 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr18-617 chr18 7904656 7904866 + 15.4 0.000 intron (NM_002845, intron 3 of 30) L1MD2|LINE|L1 337445 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr10-3374 chr10 22230824 22231034 + 15.4 0.000 Intergenic Intergenic -20946 NM_001199938 340900 Hs.450519 NM_001199938 ENSG00000223601 EBLN1 EBLN-1 endogenous Bornavirus like nucleoprotein 1 protein-coding chr18-314 chr18 69817608 69817818 + 15.4 0.000 intron (NM_152721, intron 7 of 7) MLT1B|LTR|ERVL-MaLR 130160 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr16-1474 chr16 690249 690459 + 15.4 0.000 promoter-TSS (NM_032259) promoter-TSS (NM_032259) 44 NM_032259 84219 Hs.459632 NM_032259 ENSG00000127580 WDR24 C16orf21|JFP7 WD repeat domain 24 protein-coding chr15-2075 chr15 62592523 62592733 + 15.4 0.000 Intergenic Intergenic 52553 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr4-1511 chr4 76985021 76985231 + 15.4 0.000 intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 35374 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr12-2394 chr12 30990269 30990479 + 15.4 0.000 intron (NM_001370301, intron 6 of 6) intron (NM_001370301, intron 6 of 6) 63470 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr5-1122 chr5 59069569 59069779 + 15.4 0.000 intron (NM_006203, intron 5 of 14) intron (NM_006203, intron 5 of 14) -30198 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr15-502 chr15 85047396 85047606 + 15.4 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 65527 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr12-999 chr12 123546346 123546556 + 15.4 0.000 Intergenic Intergenic 10042 NR_037470 100500909 NR_037470 ENSG00000266655 MIR3908 - microRNA 3908 ncRNA chr16-2423 chr16 74836414 74836624 + 15.4 0.000 Intergenic MER70B|LTR|ERVL -61699 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr3-1103 chr3 47324203 47324413 + 15.4 0.000 intron (NM_025010, intron 3 of 9) (T)n|Simple_repeat|Simple_repeat 41364 NM_025010 23276 Hs.517946 NM_025010 ENSG00000114648 KLHL18 - kelch like family member 18 protein-coding chr3-1224 chr3 102069424 102069634 + 15.4 0.000 Intergenic Intergenic -94176 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr1-1374 chr1 64744856 64745066 + 15.4 0.000 promoter-TSS (NM_018211) promoter-TSS (NM_018211) -12 NM_001366165 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr2-3171 chr2 201846548 201846758 + 15.4 0.000 intron (NM_001366386, intron 8 of 13) Kanga1b|DNA|TcMar-Tc2 40074 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr11-2115 chr11 128778909 128779119 + 15.4 0.000 intron (NM_001167681, intron 5 of 9) intron (NM_001167681, intron 5 of 9) 63455 NM_000220 3758 Hs.527830 NM_000220 ENSG00000151704 KCNJ1 KIR1.1|ROMK|ROMK1 potassium voltage-gated channel subfamily J member 1 protein-coding chr1-3416 chr1 960565 960775 + 15.4 0.000 promoter-TSS (NM_198317) promoter-TSS (NM_198317) 86 NM_198317 339451 Hs.109212 NM_198317 ENSG00000187961 KLHL17 - kelch like family member 17 protein-coding chr7-991 chr7 94289115 94289325 + 15.4 0.000 Intergenic Intergenic 102972 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr3-1488 chr3 116440224 116440434 + 15.4 0.000 intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) 5158 NM_001318915 4045 Hs.26409 NM_002338 ENSG00000185565 LSAMP IGLON3|LAMP limbic system associated membrane protein protein-coding chr4-1311 chr4 128529190 128529400 + 15.4 0.000 Intergenic L2c|LINE|L2 101279 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr10-2018 chr10 68638205 68638415 + 15.4 0.000 intron (NM_030625, intron 3 of 11) intron (NM_030625, intron 3 of 11) 77973 NM_030625 80312 Hs.258855 NM_030625 ENSG00000138336 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding chr21-404 chr21 41768582 41768792 + 15.4 0.000 Intergenic Intergenic -1635 NM_020639 54101 Hs.517310 NM_020639 ENSG00000183421 RIPK4 ANKK2|ANKRD3|CHANDS|DIK|NKRD3|PKK|PPS2|RIP4 receptor interacting serine/threonine kinase 4 protein-coding chr2-1750 chr2 53202127 53202337 + 15.4 0.000 Intergenic Intergenic -499617 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr19-781 chr19 47231355 47231565 + 15.4 0.000 promoter-TSS (NM_014417) promoter-TSS (NM_014417) -261 NM_014417 27113 Hs.467020 NM_014417 ENSG00000105327 BBC3 JFY-1|JFY1|PUMA BCL2 binding component 3 protein-coding chr16-1527 chr16 56582245 56582455 + 15.4 0.000 Intergenic Intergenic -7178 NM_005954 4504 Hs.73133 NM_005954 ENSG00000087250 MT3 GIF|GIFB|GRIF|ZnMT3 metallothionein 3 protein-coding chr13-480 chr13 60585061 60585271 + 15.4 0.000 Intergenic Intergenic -87789 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr5-2386 chr5 94793967 94794177 + 15.4 0.000 intron (NM_001297777, intron 15 of 19) intron (NM_001297777, intron 15 of 19) 175403 NM_032290 84250 Hs.657315 NM_032290 ENSG00000133302 SLF1 ANKRD32|BRCTD1|BRCTx SMC5-SMC6 complex localization factor 1 protein-coding chr4-1505 chr4 56787007 56787217 + 15.4 0.000 Intergenic Intergenic 34361 NR_073417 6691 Hs.98243 NM_021114 ENSG00000128040 SPINK2 HUSI-II|SPGF29 serine peptidase inhibitor, Kazal type 2 protein-coding chr3-4744 chr3 79426827 79427037 + 15.4 0.000 intron (NR_110133, intron 1 of 2) intron (NR_110133, intron 1 of 2) 15205 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr17-973 chr17 3888657 3888867 + 15.4 0.000 intron (NM_032294, intron 1 of 15) CpG 1981 NM_172206 84254 Hs.8417 NM_032294 ENSG00000004660 CAMKK1 CAMKKA calcium/calmodulin dependent protein kinase kinase 1 protein-coding chr2-3704 chr2 219902925 219903135 + 15.4 0.000 Intergenic MLT2D|LTR|ERVL 1859 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr4-1259 chr4 16705580 16705790 + 15.4 0.000 intron (NM_001304435, intron 2 of 7) intron (NM_001304435, intron 2 of 7) 192960 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr17-936 chr17 82450762 82450972 + 15.4 0.000 promoter-TSS (NM_001193654) promoter-TSS (NM_001193654) -36 NR_036517 79415 Hs.163113 NM_001033046 ENSG00000178927 CYBC1 C17orf62|Eros cytochrome b-245 chaperone 1 protein-coding chr7-2001 chr7 16346347 16346557 + 15.4 0.000 intron (NM_001101417, intron 2 of 8) intron (NM_001101417, intron 2 of 8) 75086 NR_160656 729920 Hs.636502 NM_001101417 ENSG00000214960 CRPPA ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD CDP-L-ribitol pyrophosphorylase A protein-coding chr13-933 chr13 78148006 78148216 + 15.4 0.000 intron (NR_047001, intron 1 of 5) intron (NR_047001, intron 1 of 5) 93256 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr4-1534 chr4 145804168 145804378 + 15.4 0.000 intron (NM_178835, intron 8 of 14) intron (NM_178835, intron 8 of 14) 124069 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr15-557 chr15 57537050 57537260 + 15.4 0.000 intron (NM_032866, intron 14 of 18) intron (NM_032866, intron 14 of 18) -54749 NR_104368 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr17-2029 chr17 19063710 19063920 + 15.4 0.000 TTS (NR_003271).2 TTS (NR_003271).2 321 NR_003924 780852 NR_003924 ENSG00000262074 SNORD3B-2 U3-2B|U3b2 small nucleolar RNA, C/D box 3B-2 snoRNA chr13-687 chr13 28584917 28585127 + 15.4 0.000 Intergenic Intergenic -74108 NM_015932 51371 Hs.268742 NM_015932 ENSG00000132963 POMP C13orf12|HSPC014|PNAS-110|PRAAS2|UMP1 proteasome maturation protein protein-coding chr1-2352 chr1 28601658 28601868 + 15.4 0.000 Intergenic Intergenic 9268 NM_001193532 115273 Hs.652321 NM_152304 ENSG00000188060 RAB42 - RAB42, member RAS oncogene family protein-coding chr18-367 chr18 46278593 46278803 + 15.4 0.000 Intergenic L2c|LINE|L2 -55320 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr2-4658 chr2 191928108 191928318 + 15.4 0.000 Intergenic CR1_Mam|LINE|CR1 -81125 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr9-490 chr9 35829068 35829278 + 15.4 0.000 promoter-TSS (NM_001363621) promoter-TSS (NM_001363621) -52 NM_016446 51754 Hs.9187 NM_016446 ENSG00000137103 TMEM8B C9orf127|FP588|LINC00950|NAG-5|NAG5|NGX6 transmembrane protein 8B protein-coding chr6-427 chr6 26956866 26957076 + 15.4 0.000 promoter-TSS (NR_003504) promoter-TSS (NR_003504) -22 NR_026775 100133205 Hs.526951 NR_026775 ENSG00000224843 LINC00240 C6orf41|NCRNA00240|bA373D17.1 long intergenic non-protein coding RNA 240 ncRNA chr7-889 chr7 2157873 2158083 + 15.4 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) -68926 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr4-1234 chr4 1380522 1380732 + 15.4 0.000 intron (NM_020894, intron 11 of 13) intron (NM_020894, intron 11 of 13) 25815 NM_001290079 54729 Hs.526396 NM_001290079 ENSG00000235608 NKX1-1 HSPX153|NKX-1.1|SAX2 NK1 homeobox 1 protein-coding chr19-1020 chr19 46346973 46347183 + 15.4 0.000 promoter-TSS (NM_006247) promoter-TSS (NM_006247) -9 NM_001204284 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chrX-453 chrX 119041252 119041462 + 15.4 0.000 Intergenic Intergenic 65025 NM_001289109 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr17-2281 chr17 30095699 30095909 + 15.4 0.000 intron (NM_198529, intron 22 of 22) intron (NM_198529, intron 22 of 22) -21003 NM_001261467 84081 Hs.462663 NM_032141 ENSG00000126653 NSRP1 CCDC55|HSPC095|NSrp70 nuclear speckle splicing regulatory protein 1 protein-coding chr2-1852 chr2 230161359 230161569 + 15.4 0.000 Intergenic Intergenic 58520 NM_004510 3431 Hs.145150 NM_004509 ENSG00000135899 SP110 IFI41|IFI75|IPR1|VODI SP110 nuclear body protein protein-coding chr6-714 chr6 90284396 90284606 + 15.4 0.000 intron (NM_021813, intron 1 of 8) intron (NM_021813, intron 1 of 8) 12342 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr5-986 chr5 33049935 33050145 + 15.4 0.000 Intergenic L1M2a|LINE|L1 102597 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr12-1120 chr12 51856034 51856244 + 15.4 0.000 Intergenic Intergenic 7916 NR_135803 105369971 Hs.505582 NR_135803 ENSG00000259887 LOC105369971 - uncharacterized LOC105369971 ncRNA chr2-1791 chr2 240434213 240434423 + 15.4 0.000 Intergenic Intergenic -1345 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr16-1886 chr16 85159537 85159747 + 15.4 0.000 Intergenic MIRb|SINE|MIR 22492 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr17-4979 chr17 80644614 80644824 + 15.4 0.000 intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 99881 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr2-1310 chr2 38900655 38900865 + 15.4 0.000 Intergenic Intergenic -18603 NM_001367623 100271715 Hs.99841 NM_001145451 ENSG00000214694 ARHGEF33 - Rho guanine nucleotide exchange factor 33 protein-coding chr3-2811 chr3 11238864 11239074 + 15.4 0.000 intron (NM_001098211, intron 1 of 1) L1MB7|LINE|L1 12988 NM_001098211 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr10-445 chr10 87095367 87095577 + 15.4 0.000 promoter-TSS (NM_001318904) promoter-TSS (NM_001318904) 266 NM_019054 54537 Hs.500419 NM_019054 ENSG00000122376 SHLD2 FAM35A|FAM35A1|RINN2|bA163M19.1 shieldin complex subunit 2 protein-coding chr6-1401 chr6 130201767 130201977 + 15.4 0.000 intron (NM_001277185, intron 4 of 10) L2b|LINE|L2 14013 NM_001277185 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr2-1815 chr2 70070884 70071094 + 15.4 0.000 intron (NR_033872, intron 4 of 10) intron (NR_033872, intron 4 of 10) 16026 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA chr1-2704 chr1 223730626 223730836 + 15.4 0.000 intron (NM_001146068, intron 2 of 20) MER4D1|LTR|ERV1 18192 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr2-3041 chr2 74383299 74383509 + 15.4 0.000 intron (NR_033935, intron 1 of 26) intron (NR_033935, intron 1 of 26) -2099 NR_158173 100189589 Hs.585961 NR_024463 ENSG00000237737 DCTN1-AS1 - DCTN1 antisense RNA 1 ncRNA chr1-2864 chr1 181096236 181096446 + 15.4 0.000 Intergenic Intergenic 7641 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr2-2876 chr2 188306555 188306765 + 15.4 0.000 intron (NR_045563, intron 2 of 12) intron (NR_045563, intron 2 of 12) 9168 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr5-1921 chr5 177071771 177071981 + 15.4 0.000 intron (NM_001308213, intron 8 of 8) intron (NM_001308213, intron 8 of 8) -15039 NM_213647 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr20-374 chr20 324277 324487 + 15.4 0.000 intron (NR_109990, intron 1 of 2) CpG 870 NR_109990 100507459 Hs.659689 NR_109990 NRSN2-AS1 - NRSN2 antisense RNA 1 ncRNA chr12-1576 chr12 121366023 121366233 + 15.4 0.000 Intergenic Intergenic -11919 NM_001137559 51433 Hs.7101 NM_016237 ENSG00000089053 ANAPC5 APC5 anaphase promoting complex subunit 5 protein-coding chr20-913 chr20 57168399 57168609 + 15.4 0.000 TTS (NM_001719) TTS (NM_001719) -45192 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr15-1077 chr15 38490399 38490609 + 15.4 0.000 3' UTR (NM_005739, exon 17 of 17) 3' UTR (NM_005739, exon 17 of 17) 36377 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr4-719 chr4 140082114 140082324 + 15.4 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -45796 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr2-3103 chr2 141021107 141021317 + 15.4 0.000 intron (NM_018557, intron 11 of 90) intron (NM_018557, intron 11 of 90) -434527 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr17-826 chr17 57868342 57868552 + 15.4 0.000 intron (NM_001271875, intron 7 of 10) intron (NM_001271875, intron 7 of 10) -18403 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr10-2612 chr10 78998148 78998358 + 15.4 0.000 intron (NR_015429, intron 3 of 7) intron (NR_015429, intron 3 of 7) 69195 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr6-472 chr6 28225256 28225466 + 15.4 0.000 promoter-TSS (NM_001199479) promoter-TSS (NM_001199479) 86 NM_006299 7746 Hs.100921 NM_006299 ENSG00000137185 ZSCAN9 PRD51|ZNF193 zinc finger and SCAN domain containing 9 protein-coding chr12-675 chr12 12717052 12717262 + 15.4 0.000 promoter-TSS (NM_004064) promoter-TSS (NM_004064) -113 NM_004064 1027 Hs.238990 NM_004064 ENSG00000111276 CDKN1B CDKN4|KIP1|MEN1B|MEN4|P27KIP1 cyclin dependent kinase inhibitor 1B protein-coding chr12-1290 chr12 113889959 113890169 + 15.4 0.000 intron (NM_001146698, intron 21 of 24) intron (NM_001146698, intron 21 of 24) 76261 NM_001146699 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr17-1835 chr17 9389173 9389383 + 15.4 0.000 intron (NM_004853, intron 6 of 7) intron (NM_004853, intron 6 of 7) 186542 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr22-1024 chr22 30234822 30235032 + 15.4 0.000 Intergenic Intergenic -4267 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr7-2825 chr7 99960453 99960663 + 15.4 0.000 Intergenic SATR1|Satellite|Satellite 15473 NM_001185 563 Hs.546239 NM_001185 ENSG00000160862 AZGP1 ZA2G|ZAG alpha-2-glycoprotein 1, zinc-binding protein-coding chr8-1150 chr8 144257897 144258107 + 15.4 0.000 intron (NM_001288814, intron 33 of 41) intron (NM_001288814, intron 33 of 41) 4735 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr1-7137 chr1 204408279 204408489 + 15.4 0.000 intron (NM_032833, intron 1 of 1) intron (NM_032833, intron 1 of 1) 3433 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr1-2099 chr1 118987146 118987356 + 15.4 0.000 intron (NM_152380, intron 1 of 7) CpG 1092 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr20-537 chr20 45436867 45437077 + 15.4 0.000 intron (NR_159957, intron 2 of 3) CpG 9550 NR_159957 105372631 Hs.729907 NR_159957 LOC105372631 - uncharacterized LOC105372631 ncRNA chr8-429 chr8 134159191 134159401 + 15.4 0.000 Intergenic Intergenic 272800 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr7-1084 chr7 112510496 112510706 + 15.4 0.000 Intergenic Intergenic 29610 NM_182597 286006 Hs.396189 NM_182597 ENSG00000181016 LSMEM1 C7orf53 leucine rich single-pass membrane protein 1 protein-coding chr1-4225 chr1 156660793 156661003 + 15.4 0.000 Intergenic Intergenic 16509 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr10-3415 chr10 32982415 32982625 + 15.4 0.000 Intergenic AluSz6|SINE|Alu -24290 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr2-3156 chr2 196266919 196267129 + 15.4 0.000 intron (NM_020760, intron 17 of 28) intron (NM_020760, intron 17 of 28) 7000 NR_110226 101927482 Hs.191841 NR_110225 HECW2-AS1 - HECW2 antisense RNA 1 ncRNA chr2-3052 chr2 86047166 86047376 + 15.4 0.000 intron (NM_015425, intron 18 of 33) intron (NM_015425, intron 18 of 33) 58615 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr12-1516 chr12 62817966 62818176 + 15.4 0.000 intron (NM_020700, intron 2 of 9) intron (NM_020700, intron 2 of 9) 117079 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr3-3823 chr3 24238394 24238604 + 15.4 0.000 intron (NM_001354708, intron 2 of 9) intron (NM_001354708, intron 2 of 9) 87175 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr2-1884 chr2 75503009 75503219 + 15.4 0.000 intron (NM_032181, intron 3 of 3) intron (NM_032181, intron 3 of 3) -20954 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr1-1675 chr1 58699956 58700166 + 15.4 0.000 promoter-TSS (NM_001085487) promoter-TSS (NM_001085487) 1 NM_001085487 114803 Hs.744921 NM_001085487 ENSG00000162601 MYSM1 2A-DUB|2ADUB|BMFS4 Myb like, SWIRM and MPN domains 1 protein-coding chr14-810 chr14 96818001 96818211 + 15.4 0.000 intron (NM_003384, intron 1 of 12) intron (NM_003384, intron 1 of 12) 20724 NM_003384 7443 Hs.422662 NM_003384 ENSG00000100749 VRK1 PCH1|PCH1A VRK serine/threonine kinase 1 protein-coding chr7-1811 chr7 101986727 101986937 + 15.4 0.000 intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 169206 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr9-773 chr9 128035182 128035392 + 15.4 0.000 Intergenic Intergenic 32033 NM_197956 203245 Hs.373606 NM_197956 ENSG00000171169 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding chr6-1655 chr6 148001847 148002057 + 15.4 0.000 Intergenic Intergenic -270376 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr12-486 chr12 57611356 57611566 + 15.3 0.000 promoter-TSS (NM_182947) promoter-TSS (NM_182947) 26 NM_182947 115557 Hs.61581 NM_133483 ENSG00000240771 ARHGEF25 GEFT|p63RhoGEF Rho guanine nucleotide exchange factor 25 protein-coding chr3-726 chr3 49358291 49358501 + 15.3 0.000 promoter-TSS (NM_201397) promoter-TSS (NM_201397) -43 NM_201397 2876 Hs.76686 NM_000581 ENSG00000233276 GPX1 GPXD|GSHPX1 glutathione peroxidase 1 protein-coding chr7-1613 chr7 2812150 2812360 + 15.3 0.000 intron (NM_001293092, intron 1 of 2) intron (NM_001293092, intron 1 of 2) 2975 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr6-519 chr6 154448436 154448646 + 15.3 0.000 intron (NM_001368116, intron 2 of 12) intron (NM_001368116, intron 2 of 12) -14468 NM_001368119 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr4-1489 chr4 38857550 38857760 + 15.3 0.000 promoter-TSS (NM_006068) promoter-TSS (NM_006068) -838 NM_006068 10333 Hs.575090 NM_006068 ENSG00000174130 TLR6 CD286 toll like receptor 6 protein-coding chr11-1351 chr11 35781442 35781652 + 15.3 0.000 intron (NM_017583, intron 4 of 4) intron (NM_017583, intron 4 of 4) 118772 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr4-735 chr4 32140633 32140843 + 15.3 0.000 intron (NR_125936, intron 1 of 2) intron (NR_125936, intron 1 of 2) -118316 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA chr2-5323 chr2 75498878 75499088 + 15.3 0.000 intron (NM_032181, intron 3 of 3) intron (NM_032181, intron 3 of 3) -25085 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr12-1008 chr12 4604852 4605062 + 15.3 0.000 promoter-TSS (NM_001282286) promoter-TSS (NM_001282286) 94 NM_001282286 8798 Hs.439530 NM_003845 ENSG00000010219 DYRK4 - dual specificity tyrosine phosphorylation regulated kinase 4 protein-coding chr11-2586 chr11 123153124 123153334 + 15.3 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 42019 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr17-1226 chr17 50200294 50200504 + 15.3 0.000 intron (NM_000088, intron 1 of 50) CpG-11414 1240 NM_000088 1277 Hs.172928 NM_000088 ENSG00000108821 COL1A1 EDSARTH1|EDSC|OI1|OI2|OI3|OI4 collagen type I alpha 1 chain protein-coding chr5-1789 chr5 52813960 52814170 + 15.3 0.000 intron (NM_181501, intron 1 of 28) intron (NM_181501, intron 1 of 28) 26149 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr18-494 chr18 13113080 13113290 + 15.3 0.000 intron (NM_032142, intron 40 of 44) intron (NM_032142, intron 40 of 44) -105575 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr3-1454 chr3 48034067 48034277 + 15.3 0.000 intron (NM_002375, intron 1 of 18) intron (NM_002375, intron 1 of 18) 54676 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr9-1489 chr9 129561790 129562000 + 15.3 0.000 Intergenic Intergenic -46989 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr10-1738 chr10 123870495 123870705 + 15.3 0.000 intron (NM_198148, intron 2 of 13) intron (NM_198148, intron 2 of 13) 21207 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr3-1696 chr3 33687797 33688007 + 15.3 0.000 intron (NM_001365634, intron 4 of 35) intron (NM_001365634, intron 4 of 35) -28223 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr7-1587 chr7 105473252 105473462 + 15.3 0.000 intron (NM_001318164, intron 9 of 15) AluSz|SINE|Alu 35163 NM_001318163 54517 Hs.520619 NM_019042 ENSG00000091127 PUS7 IDDABS pseudouridine synthase 7 protein-coding chr2-2735 chr2 147636661 147636871 + 15.3 0.000 Intergenic Intergenic -207751 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr12-1336 chr12 115354126 115354336 + 15.3 0.000 Intergenic Intergenic -670056 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr12-2195 chr12 14928962 14929172 + 15.3 0.000 promoter-TSS (NM_001300784) promoter-TSS (NM_001300784) 58 NM_001300784 121506 Hs.162143 NM_152321 ENSG00000139055 ERP27 C12orf46|PDIA8 endoplasmic reticulum protein 27 protein-coding chr7-1476 chr7 116801041 116801251 + 15.3 0.000 Intergenic Intergenic -61441 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr10-1990 chr10 43857606 43857816 + 15.3 0.000 Intergenic Intergenic -1700 NR_038268 100506835 Hs.462615 NR_038268 ENSG00000226808 LINC00840 - long intergenic non-protein coding RNA 840 ncRNA chr7-2279 chr7 25849903 25850113 + 15.3 0.000 Intergenic Intergenic -59889 NR_157808 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chrX-491 chrX 21023971 21024181 + 15.3 0.000 Intergenic L1M1|LINE|L1 -350342 NM_001330770 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr1-2620 chr1 94481459 94481669 + 15.3 0.000 intron (NM_002858, intron 9 of 22) MLT1L|LTR|ERVL-MaLR 60195 NM_001993 2152 Hs.62192 NM_001993 ENSG00000117525 F3 CD142|TF|TFA coagulation factor III, tissue factor protein-coding chr16-750 chr16 2467646 2467856 + 15.3 0.000 non-coding (NR_135198, exon 1 of 1) non-coding (NR_135198, exon 1 of 1) 462 NR_135198 729652 Hs.638553 NR_135198 ENSG00000259895 LOC729652 - uncharacterized LOC729652 ncRNA chr12-773 chr12 118437181 118437391 + 15.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 60731 NM_022491 64426 Hs.416630 NM_022491 ENSG00000111707 SUDS3 SAP45|SDS3 SDS3 homolog, SIN3A corepressor complex component protein-coding chr7-2678 chr7 13981143 13981353 + 15.3 0.000 intron (NM_001370556, intron 3 of 11) intron (NM_001370556, intron 3 of 11) 5266 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr18-703 chr18 3095783 3095993 + 15.3 0.000 intron (NM_019856, intron 24 of 36) intron (NM_019856, intron 24 of 36) -83941 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr3-1069 chr3 64321767 64321977 + 15.3 0.000 Intergenic X6A_LINE|LINE|CR1 -53699 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr20-1294 chr20 52743173 52743383 + 15.3 0.000 Intergenic Intergenic 122440 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA chr1-2837 chr1 77473810 77474020 + 15.3 0.000 intron (NM_012093, intron 8 of 13) intron (NM_012093, intron 8 of 13) 190828 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr12-418 chr12 93377808 93378018 + 15.3 0.000 promoter-TSS (NM_001301023) promoter-TSS (NM_001301023) -12 NM_019094 11163 Hs.506325 NM_019094 ENSG00000173598 NUDT4 DIPP-2B|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P|NUDT4B nudix hydrolase 4 protein-coding chr9-2946 chr9 136525561 136525771 + 15.3 0.000 intron (NM_017617, intron 2 of 33) intron (NM_017617, intron 2 of 33) -6040 NR_039820 100616242 NR_039820 ENSG00000263403 MIR4673 - microRNA 4673 ncRNA chr3-3723 chr3 183910721 183910931 + 15.3 0.000 Intergenic Intergenic 24026 NR_039650 100616127 NR_039650 ENSG00000263932 MIR4448 - microRNA 4448 ncRNA chr11-3574 chr11 58301668 58301878 + 15.3 0.000 Intergenic Intergenic -33513 NM_207374 81341 Hs.531507 NM_207374 ENSG00000172772 OR10W1 OR10W1P|OR10W1Q|OR11-236|UNQ6469 olfactory receptor family 10 subfamily W member 1 protein-coding chr7-1581 chr7 99370094 99370304 + 15.3 0.000 Intergenic Intergenic -4531 NM_005720 10095 Hs.489284 NM_005720 ENSG00000130429 ARPC1B ARC41|PLTEID|p40-ARC|p41-ARC actin related protein 2/3 complex subunit 1B protein-coding chr3-2791 chr3 196775046 196775256 + 15.3 0.000 intron (NM_002577, intron 1 of 14) intron (NM_002577, intron 1 of 14) 35294 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr4-1652 chr4 109432719 109432929 + 15.3 0.000 promoter-TSS (NM_001318085) promoter-TSS (NM_001318085) -891 NM_001318085 10427 Hs.292472 NM_006323 ENSG00000138802 SEC24B SEC24 SEC24 homolog B, COPII coat complex component protein-coding chr12-590 chr12 42325857 42326067 + 15.3 0.000 promoter-TSS (NM_001364824) promoter-TSS (NM_001364824) 132 NM_033114 85437 Hs.496279 NM_033114 ENSG00000139168 ZCRB1 MADP-1|MADP1|RBM36|SNRNP31|ZCCHC19 zinc finger CCHC-type and RNA binding motif containing 1 protein-coding chr7-1646 chr7 45970665 45970875 + 15.3 0.000 Intergenic Intergenic -49498 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr5-754 chr5 153551694 153551904 + 15.3 0.000 intron (NM_001258020, intron 3 of 16) intron (NM_001258020, intron 3 of 16) 59627 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr16-1557 chr16 82829265 82829475 + 15.3 0.000 non-coding (NR_110938, exon 3 of 3) non-coding (NR_110938, exon 3 of 3) 56051 NR_110938 101928446 Hs.684007 NR_110938 ENSG00000260862 LOC101928446 - uncharacterized LOC101928446 ncRNA chr5-1482 chr5 96881400 96881610 + 15.3 0.000 intron (NM_001329229, intron 2 of 17) intron (NM_001329229, intron 2 of 17) 5566 NM_001329233 64167 Hs.482910 NM_022350 ENSG00000164308 ERAP2 L-RAP|LRAP endoplasmic reticulum aminopeptidase 2 protein-coding chr9-1195 chr9 113577580 113577790 + 15.3 0.000 intron (NM_001351526, intron 2 of 8) L2a|LINE|L2 -3243 NM_001282922 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr7-1161 chr7 137978743 137978953 + 15.3 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 23238 NM_194071 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr17-1472 chr17 76710262 76710472 + 15.3 0.000 promoter-TSS (NR_130926) promoter-TSS (NR_130926) 598 NM_001008528 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr4-2117 chr4 60366688 60366898 + 15.3 0.000 Intergenic Intergenic -555826 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr22-688 chr22 43812325 43812535 + 15.3 0.000 promoter-TSS (NM_022785) promoter-TSS (NM_022785) -125 NM_198856 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr3-3008 chr3 104133145 104133355 + 15.3 0.000 Intergenic Intergenic -609134 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr4-797 chr4 22607450 22607660 + 15.3 0.000 Intergenic LTR84b|LTR|ERVL -85359 NM_020973 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr22-672 chr22 50444658 50444868 + 15.3 0.000 TTS (NM_002972) TTS (NM_002972) 30272 NM_002972 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr1-5060 chr1 95940110 95940320 + 15.3 0.000 Intergenic Intergenic -51853 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr13-832 chr13 51913681 51913891 + 15.3 0.000 Intergenic Intergenic 51817 NM_001346075 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr17-1154 chr17 2982926 2983136 + 15.3 0.000 intron (NM_001330058, intron 10 of 24) intron (NM_001330058, intron 10 of 24) -17136 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA KZ208921.1-1 KZ208921.1 76061 76264 + 15.3 0.000 NA NA NA NA chr2-1807 chr2 47041122 47041332 + 15.3 0.000 intron (NM_001288951, intron 15 of 20) intron (NM_001288951, intron 15 of 20) -99372 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr17-1229 chr17 64154763 64154973 + 15.3 0.000 exon (NM_001288733, exon 9 of 12) exon (NM_001288733, exon 9 of 12) 8529 NR_002995 677842 Hs.405444 NR_002995 ENSG00000277887 SNORA50C ACA62|SNORA76|SNORA76C small nucleolar RNA, H/ACA box 50C snoRNA chr20-914 chr20 58017218 58017428 + 15.3 0.000 Intergenic Intergenic 13419 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr12-782 chr12 19131151 19131361 + 15.3 0.000 intron (NM_019012, intron 2 of 25) intron (NM_019012, intron 2 of 25) 1523 NM_001190860 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr2-4847 chr2 84995731 84995941 + 15.3 0.000 intron (NM_020122, intron 1 of 6) intron (NM_020122, intron 1 of 6) 24675 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr3-3214 chr3 195891863 195892073 + 15.3 0.000 intron (NM_005781, intron 1 of 14) intron (NM_005781, intron 1 of 14) 816 NM_001308046 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr3-2396 chr3 184843751 184843961 + 15.3 0.000 intron (NM_001009921, intron 7 of 46) Tigger13a|DNA|TcMar-Tigger 31349 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr13-981 chr13 42865520 42865730 + 15.3 0.000 intron (NR_126388, intron 1 of 2) intron (NR_126388, intron 1 of 2) 7119 NR_126389 104355147 Hs.633967 NR_126388 LINC00428 - long intergenic non-protein coding RNA 428 ncRNA chr6-1907 chr6 18280243 18280453 + 15.3 0.000 Intergenic MamRTE1|LINE|RTE-BovB -15818 NM_001134709 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr9-785 chr9 110579241 110579451 + 15.3 0.000 exon (NM_153366, exon 1 of 48) exon (NM_153366, exon 1 of 48) 395 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr8-596 chr8 51398422 51398632 + 15.3 0.000 intron (NM_144651, intron 17 of 22) intron (NM_144651, intron 17 of 22) 410918 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr14-1122 chr14 89504807 89505017 + 15.3 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) -71304 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA chr10-1610 chr10 61937484 61937694 + 15.3 0.000 intron (NM_032199, intron 2 of 9) intron (NM_032199, intron 2 of 9) 35890 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr16-858 chr16 86751335 86751545 + 15.3 0.000 Intergenic Intergenic 29349 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr5-1610 chr5 56457920 56458130 + 15.3 0.000 intron (NR_104664, intron 4 of 4) intron (NR_104664, intron 4 of 4) 23744 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr2-1731 chr2 235263741 235263951 + 15.3 0.000 Intergenic Intergenic -230197 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr15-371 chr15 72475158 72475368 + 15.3 0.000 intron (NM_005744, intron 1 of 13) CpG 933 NM_005744 25820 Hs.268787 NM_005744 ENSG00000166233 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding chr7-525 chr7 76322628 76322838 + 15.3 0.000 Intergenic Intergenic 20060 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr1-3011 chr1 224175608 224175818 + 15.3 0.000 Intergenic Intergenic -7527 NM_003676 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|HLD18|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr12-1755 chr12 69291058 69291268 + 15.3 0.000 Intergenic Intergenic -17945 NR_031692 100302182 NR_031692 ENSG00000283476 MIR1279 MIRN1279|hsa-mir-1279 microRNA 1279 ncRNA chr14-2061 chr14 67665999 67666209 + 15.3 0.000 intron (NM_006370, intron 1 of 5) intron (NM_006370, intron 1 of 5) 8528 NM_006370 10490 Hs.741177 NM_006370 ENSG00000100568 VTI1B VTI1|VTI1-LIKE|VTI1L|VTI2|v-SNARE|vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding chr1-2329 chr1 202118984 202119194 + 15.3 0.000 Intergenic Intergenic -3828 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr9-710 chr9 124399648 124399858 + 15.3 0.000 intron (NM_002799, intron 5 of 7) intron (NM_002799, intron 5 of 7) 15689 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr1-2639 chr1 151198326 151198536 + 15.3 0.000 promoter-TSS (NM_003557) promoter-TSS (NM_003557) -121 NM_001135636 8394 Hs.655131 NM_003557 ENSG00000143398 PIP5K1A - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha protein-coding chr12-1442 chr12 107228234 107228444 + 15.3 0.000 Intergenic LTR81B|LTR|Gypsy -90095 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr13-592 chr13 113789783 113789993 + 15.3 0.000 intron (NM_182614, intron 3 of 8) intron (NM_182614, intron 3 of 8) -25722 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr14-918 chr14 92121762 92121972 + 15.3 0.000 promoter-TSS (NM_017437) promoter-TSS (NM_017437) -102 NM_001322272 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr22-456 chr22 37020166 37020376 + 15.3 0.000 promoter-TSS (NM_001270483) promoter-TSS (NM_001270483) -88 NM_001270483 7263 Hs.474783 NM_003312 ENSG00000128311 TST RDS thiosulfate sulfurtransferase protein-coding chr1-3242 chr1 200512387 200512597 + 15.3 0.000 Intergenic Intergenic -102456 NM_001281294 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr20-942 chr20 24673718 24673928 + 15.3 0.000 Intergenic Intergenic 203862 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr8-835 chr8 99893460 99893670 + 15.3 0.000 intron (NM_004374, intron 1 of 3) CpG 142 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr13-855 chr13 101452805 101453015 + 15.3 0.000 exon (NM_004791, exon 1 of 11) exon (NM_004791, exon 1 of 11) 235 NM_004791 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr2-2398 chr2 20324156 20324366 + 15.3 0.000 intron (NM_001282790, intron 1 of 18) MIRc|SINE|MIR 3125 NM_001282790 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr5-2553 chr5 177066359 177066569 + 15.3 0.000 non-coding (NR_131774, exon 5 of 5) non-coding (NR_131774, exon 5 of 5) -20451 NM_213647 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr16-1140 chr16 85582679 85582889 + 15.3 0.000 Intergenic Intergenic -28625 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chrX-701 chrX 71125390 71125600 + 15.3 0.000 exon (NM_005120, exon 16 of 45) exon (NM_005120, exon 16 of 45) 6899 NM_005120 9968 Hs.409226 NM_005120 ENSG00000184634 MED12 ARC240|CAGH45|FGS1|HOPA|MED12S|OHDOX|OKS|OPA1|TNRC11|TRAP230 mediator complex subunit 12 protein-coding chr14-1114 chr14 75184633 75184843 + 15.3 0.000 Intergenic Intergenic -8126 NM_006827 10972 Hs.74137 NM_006827 ENSG00000170348 TMED10 P24(DELTA)|S31I125|S31III125|TMP21|Tmp-21-I|p23|p24d1 transmembrane p24 trafficking protein 10 protein-coding chr22-1021 chr22 29604642 29604852 + 15.3 0.000 intron (NM_181831, intron 1 of 14) MER5A1|DNA|hAT-Charlie 1114 NM_181831 4771 Hs.187898 NM_000268 ENSG00000186575 NF2 ACN|BANF|SCH neurofibromin 2 protein-coding chr2-2529 chr2 190747139 190747349 + 15.3 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 88086 NM_001321314 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr11-1884 chr11 9399600 9399810 + 15.3 0.000 intron (NM_006391, intron 1 of 24) L2c|LINE|L2 15053 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chr21-198 chr21 43778895 43779105 + 15.3 0.000 Intergenic LTR26C|LTR|ERV1 -2625 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr3-449 chr3 185825156 185825366 + 15.3 0.000 promoter-TSS (NM_006548) promoter-TSS (NM_006548) -219 NM_001007225 10644 Hs.35354 NM_006548 ENSG00000073792 IGF2BP2 IMP-2|IMP2|VICKZ2 insulin like growth factor 2 mRNA binding protein 2 protein-coding chr2-1223 chr2 4091974 4092184 + 15.3 0.000 Intergenic L1MA5|LINE|L1 117918 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr17-2475 chr17 62557752 62557962 + 15.3 0.000 intron (NM_001284363, intron 7 of 19) L1M6|LINE|L1 -69813 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr15-982 chr15 62603720 62603930 + 15.3 0.000 Intergenic Intergenic 41356 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr14-952 chr14 50260606 50260816 + 15.3 0.000 intron (NM_024884, intron 9 of 9) intron (NM_024884, intron 9 of 9) -29133 NM_006939 6655 Hs.291533 NM_006939 ENSG00000100485 SOS2 NS9|SOS-2 SOS Ras/Rho guanine nucleotide exchange factor 2 protein-coding chr12-479 chr12 131928832 131929042 + 15.3 0.000 promoter-TSS (NM_001002019) promoter-TSS (NM_001002019) -339 NM_001002019 80324 Hs.592004 NM_025215 ENSG00000177192 PUS1 MLASA1 pseudouridine synthase 1 protein-coding chr2-1874 chr2 44362370 44362580 + 15.3 0.000 promoter-TSS (NM_001171603) promoter-TSS (NM_001171603) 528 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr14-1391 chr14 51521802 51522012 + 15.3 0.000 intron (NM_001042481, intron 1 of 14) intron (NM_001042481, intron 1 of 14) 32779 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr1-3422 chr1 1436698 1436908 + 15.3 0.000 intron (NM_199121, intron 1 of 2) intron (NM_199121, intron 1 of 2) 1113 NM_022834 64856 Hs.449009 NM_022834 ENSG00000179403 VWA1 WARP von Willebrand factor A domain containing 1 protein-coding chr19-958 chr19 13022190 13022400 + 15.3 0.000 intron (NM_001365902, intron 1 of 10) intron (NM_001365902, intron 1 of 10) -1677 NM_001271044 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr6-1120 chr6 139473479 139473689 + 15.3 0.000 intron (NR_033919, intron 1 of 3) intron (NR_033919, intron 1 of 3) 1012 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr17-675 chr17 32007294 32007504 + 15.3 0.000 promoter-TSS (NM_001321350) promoter-TSS (NM_001321350) 16 NM_001321350 114659 Hs.514071 NM_052888 ENSG00000185158 LRRC37B LRRC37 leucine rich repeat containing 37B protein-coding chr14-814 chr14 100079085 100079295 + 15.3 0.000 intron (NM_016337, intron 1 of 13) intron (NM_016337, intron 1 of 13) 13768 NM_016337 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr17-1469 chr17 67158156 67158366 + 15.3 0.000 intron (NM_001330447, intron 17 of 32) intron (NM_001330447, intron 17 of 32) -86515 NR_136398 101928021 Hs.569824 NR_136398 LOC101928021 - uncharacterized LOC101928021 ncRNA chr10-2042 chr10 80386269 80386479 + 15.3 0.000 Intergenic L1MCb|LINE|L1 -21455 NM_001243779 84293 Hs.500333 NM_032333 ENSG00000122378 PRXL2A Adrx|C10orf58|FAM213A|PAMM peroxiredoxin like 2A protein-coding chr1-2695 chr1 209808202 209808412 + 15.3 0.000 Intergenic Intergenic -2132 NM_001206696 3664 Hs.591415 NM_006147 ENSG00000117595 IRF6 LPS|OFC6|PIT|PPS|PPS1|VWS|VWS1 interferon regulatory factor 6 protein-coding chr3-796 chr3 170908625 170908835 + 15.3 0.000 promoter-TSS (NM_020390) promoter-TSS (NM_020390) -93 NM_020390 56648 Hs.164144 NM_020390 ENSG00000163577 EIF5A2 EIF-5A2|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding chr20-344 chr20 62861977 62862187 + 15.3 0.000 promoter-TSS (NM_006602) promoter-TSS (NM_006602) -260 NM_006602 10732 Hs.126248 NM_006602 ENSG00000101190 TCFL5 CHA|E2BP-1|Figlb|SOSF1|bHLHe82 transcription factor like 5 protein-coding chr16-1483 chr16 2111132 2111342 + 15.3 0.000 exon (NM_001009944, exon 15 of 46) exon (NM_001009944, exon 15 of 46) -4484 NR_106775 102465429 NR_106775 ENSG00000284008 MIR6511B1 MIR6511B-1|hsa-mir-6511b-1 microRNA 6511b-1 ncRNA chr2-2236 chr2 205708147 205708357 + 15.3 0.000 intron (NM_018534, intron 2 of 15) intron (NM_018534, intron 2 of 15) 25751 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr11-2412 chr11 10375358 10375568 + 15.3 0.000 intron (NR_103765, intron 2 of 3) intron (NR_103765, intron 2 of 3) 67150 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA chr10-2281 chr10 4943492 4943702 + 15.3 0.000 Intergenic LTR49|LTR|ERV1 -19818 NM_001353 1645 Hs.460260 NM_001353 ENSG00000187134 AKR1C1 2-ALPHA-HSD|20-ALPHA-HSD|C9|DD1|DD1/DD2|DDH|DDH1|H-37|HAKRC|HBAB|MBAB aldo-keto reductase family 1 member C1 protein-coding chr1-1312 chr1 92961712 92961922 + 15.3 0.000 promoter-TSS (NM_001252273) promoter-TSS (NM_001252273) -295 NM_001252270 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr19-1583 chr19 8320756 8320966 + 15.3 0.000 promoter-TSS (NM_001031) promoter-TSS (NM_001031) 514 NM_005001 4701 Hs.333427 NM_005001 ENSG00000267855 NDUFA7 B14.5a|CI-B14.5a NADH:ubiquinone oxidoreductase subunit A7 protein-coding chr17-644 chr17 32877154 32877364 + 15.3 0.000 promoter-TSS (NM_001303279) promoter-TSS (NM_001303279) -135 NM_001303280 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr2-2519 chr2 177148924 177149134 + 15.3 0.000 Intergenic Intergenic 63382 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr4-2155 chr4 86306956 86307166 + 15.3 0.000 intron (NM_001363657, intron 2 of 13) intron (NM_001363657, intron 2 of 13) 47583 NM_001318067 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr5-2475 chr5 140575468 140575678 + 15.3 0.000 Intergenic Intergenic -10969 NM_133174 10307 Hs.529449 NM_006051 ENSG00000113108 APBB3 FE65L2|SRA amyloid beta precursor protein binding family B member 3 protein-coding chr5-1499 chr5 126805207 126805417 + 15.3 0.000 intron (NR_134488, intron 2 of 11) intron (NR_134488, intron 2 of 11) 28176 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr16-1432 chr16 53992018 53992228 + 15.3 0.000 intron (NM_001363988, intron 9 of 9) intron (NM_001363988, intron 9 of 9) -47270 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr21-145 chr21 33324809 33325019 + 15.3 0.000 promoter-TSS (NM_000629) promoter-TSS (NM_000629) -56 NM_000629 3454 Hs.529400 NM_000629 ENSG00000142166 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon alpha and beta receptor subunit 1 protein-coding chr12-2508 chr12 87930079 87930289 + 15.3 0.000 Intergenic Intergenic 99217 NM_152589 160419 Hs.112930 NM_152589 ENSG00000165805 C12orf50 - chromosome 12 open reading frame 50 protein-coding chr19-954 chr19 5113471 5113681 + 15.3 0.000 TTS (NM_001370093) TTS (NM_001370093) 144463 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr15-659 chr15 63097201 63097411 + 15.3 0.000 Intergenic Intergenic -24555 NM_032857 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr6-1710 chr6 27127052 27127262 + 15.3 0.000 Intergenic Intergenic 5639 NM_021058 8970 Hs.591807 NM_021058 ENSG00000124635 HIST1H2BJ H2B/r|H2BFR|H2BJ histone cluster 1 H2B family member j protein-coding chr13-512 chr13 30125779 30125989 + 15.3 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -17009 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr8-1283 chr8 30415907 30416117 + 15.3 0.000 intron (NM_001008710, intron 1 of 8) intron (NM_001008710, intron 1 of 8) -30611 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr2-2477 chr2 127570253 127570463 + 15.3 0.000 intron (NM_001080527, intron 6 of 46) LTR16B1|LTR|ERVL 604 NR_132317 105373609 Hs.677195 NR_132317 LOC105373609 - uncharacterized LOC105373609 ncRNA chr1-1390 chr1 158117956 158118166 + 15.3 0.000 Intergenic Intergenic 22579 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr8-1909 chr8 30537045 30537255 + 15.3 0.000 intron (NM_001008710, intron 5 of 8) intron (NM_001008710, intron 5 of 8) -101430 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr13-633 chr13 100550737 100550947 + 15.3 0.000 intron (NM_001195087, intron 2 of 2) intron (NM_001195087, intron 2 of 2) -17040 NM_033110 87769 Hs.350868 NM_033110 ENSG00000134864 GGACT A2LD1 gamma-glutamylamine cyclotransferase protein-coding chr3-859 chr3 96813262 96813472 + 15.3 0.000 Intergenic CpG -1227 NM_001080448 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr5-1977 chr5 141718866 141719076 + 15.3 0.000 Intergenic Intergenic -36741 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr3-1718 chr3 78919004 78919214 + 15.3 0.000 intron (NM_002941, intron 4 of 30) intron (NM_002941, intron 4 of 30) 100350 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr12-1678 chr12 96166895 96167105 + 15.3 0.000 Intergenic (CATT)n|Simple_repeat|Simple_repeat -27375 NM_005230 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr4-2031 chr4 3472731 3472941 + 15.3 0.000 intron (NM_001363811, intron 2 of 7) intron (NM_001363811, intron 2 of 7) 9530 NM_001301071 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr20-230 chr20 37012705 37012915 + 15.3 0.000 intron (NM_002895, intron 19 of 21) SVA_D|Retroposon|SVA -60967 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr6-1016 chr6 76701750 76701960 + 15.3 0.000 Intergenic Intergenic -108232 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr2-2050 chr2 164917464 164917674 + 15.3 0.000 intron (NM_001199148, intron 6 of 10) intron (NM_001199148, intron 6 of 10) 37956 NM_001351537 151258 Hs.658702 NM_173512 ENSG00000169507 SLC38A11 AVT2 solute carrier family 38 member 11 protein-coding chr11-2555 chr11 95339594 95339804 + 15.3 0.000 Intergenic Intergenic -107224 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr3-1354 chr3 179713733 179713943 + 15.3 0.000 intron (NM_003940, intron 6 of 20) MamRep605|LTR?|LTR? 60798 NM_003940 8975 Hs.175322 NM_003940 ENSG00000058056 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 protein-coding chr2-4556 chr2 56026194 56026404 + 15.3 0.000 intron (NR_126406, intron 1 of 2) intron (NR_126406, intron 1 of 2) 21027 NR_126406 104355290 Hs.580331 NR_126406 MIR217HG MIR216AHG|MIR216BHG MIR217 host gene ncRNA chrX-675 chrX 13801789 13801999 + 15.3 0.000 intron (NM_001318729, intron 1 of 6) intron (NM_001318729, intron 1 of 6) 15199 NM_001001995 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr2-2470 chr2 109164966 109165176 + 15.3 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -23483 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr14-1103 chr14 70707391 70707601 + 15.3 0.000 intron (NR_125769, intron 3 of 3) intron (NR_125769, intron 3 of 3) 8798 NR_125769 103695436 Hs.572296 NR_125769 ENSG00000258689 LINC01269 - long intergenic non-protein coding RNA 1269 ncRNA chr12-1541 chr12 93824566 93824776 + 15.3 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -86848 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr6-525 chr6 7137655 7137865 + 15.3 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 29799 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr11-4209 chr11 62908714 62908924 + 15.3 0.000 3' UTR (NM_000738, exon 2 of 2) 3' UTR (NM_000738, exon 2 of 2) 12544 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr7-1796 chr7 85705056 85705266 + 15.3 0.000 Intergenic Intergenic 284039 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr5-695 chr5 32505362 32505572 + 15.3 0.000 Intergenic Intergenic -60727 NM_016107 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr15-1501 chr15 47610157 47610367 + 15.3 0.000 intron (NM_001198999, intron 4 of 19) intron (NM_001198999, intron 4 of 19) -107243 NM_001358352 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr10-1516 chr10 34194279 34194489 + 15.3 0.000 intron (NM_001184789, intron 20 of 22) intron (NM_001184789, intron 20 of 22) -421704 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr11-1602 chr11 35144398 35144608 + 15.3 0.000 intron (NM_001001389, intron 1 of 16) intron (NM_001001389, intron 1 of 16) 5332 NM_001202557 960 Hs.502328 NM_000610 ENSG00000026508 CD44 CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 CD44 molecule (Indian blood group) protein-coding chr1-2198 chr1 61077913 61078123 + 15.3 0.000 intron (NM_001145511, intron 1 of 10) intron (NM_001145511, intron 1 of 10) 791 NM_001145511 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr1-2731 chr1 12593014 12593224 + 15.3 0.000 intron (NM_004753, intron 1 of 5) L2|LINE|L2 3494 NM_001324370 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding chr14-594 chr14 77760992 77761202 + 15.3 0.000 promoter-TSS (NM_012245) promoter-TSS (NM_012245) 59 NM_001318844 22938 Hs.445498 NM_012245 ENSG00000100603 SNW1 Bx42|FUN20|NCOA-62|PRPF45|Prp45|SKIIP|SKIP|SKIP1 SNW domain containing 1 protein-coding chr12-1327 chr12 62625253 62625463 + 15.3 0.000 Intergenic Intergenic 21672 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr8-868 chr8 101538296 101538506 + 15.3 0.000 intron (NM_001330593, intron 1 of 15) intron (NM_001330593, intron 1 of 15) 45962 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr9-776 chr9 134473738 134473948 + 15.3 0.000 Intergenic Intergenic 67283 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr17-3575 chr17 80217403 80217613 + 15.3 0.000 intron (NR_148201, intron 1 of 6) intron (NR_148201, intron 1 of 6) 2825 NM_001352921 6448 Hs.31074 NM_000199 ENSG00000181523 SGSH HSS|MPS3A|SFMD N-sulfoglucosamine sulfohydrolase protein-coding chr11-2857 chr11 9527389 9527599 + 15.3 0.000 intron (NM_001282656, intron 15 of 15) intron (NM_001282656, intron 15 of 15) -46176 NM_003390 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr9-1559 chr9 5611713 5611923 + 15.3 0.000 Intergenic Intergenic -17289 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr8-1202 chr8 68830056 68830266 + 15.3 0.000 Intergenic UCON26|Unknown|Unknown 274029 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr2-2685 chr2 7094334 7094544 + 15.3 0.000 Intergenic MER50|LTR|ERV1 -16559 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr14-1613 chr14 102157587 102157797 + 15.3 0.000 intron (NM_001353659, intron 1 of 1) intron (NM_001353659, intron 1 of 1) 17795 NM_001353661 91833 Hs.36859 NM_144574 ENSG00000140153 WDR20 DMR WD repeat domain 20 protein-coding chr20-766 chr20 39698756 39698966 + 15.3 0.000 Intergenic Intergenic -305600 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr11-2252 chr11 99505455 99505665 + 15.3 0.000 intron (NM_001243271, intron 2 of 20) intron (NM_001243271, intron 2 of 20) -50585 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr9-1271 chr9 135478979 135479189 + 15.3 0.000 promoter-TSS (NM_014811) promoter-TSS (NM_014811) -698 NM_014811 9858 Hs.533260 NM_014811 ENSG00000196422 PPP1R26 KIAA0649|NRBE3 protein phosphatase 1 regulatory subunit 26 protein-coding chr19-1766 chr19 13619357 13619567 + 15.3 0.000 Intergenic Intergenic -112290 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr6-2021 chr6 42873033 42873243 + 15.3 0.000 Intergenic Intergenic -6478 NR_134563 285855 Hs.520133 NM_198486 ENSG00000146223 RPL7L1 dJ475N16.4 ribosomal protein L7 like 1 protein-coding chr4-1344 chr4 183413262 183413472 + 15.3 0.000 Intergenic Intergenic -31269 NM_001317343 55602 Hs.592508 NM_017632 ENSG00000168564 CDKN2AIP CARF CDKN2A interacting protein protein-coding chr21-285 chr21 38303336 38303546 + 15.3 0.000 3' UTR (NM_170736, exon 3 of 3) 3' UTR (NM_170736, exon 3 of 3) 31021 NM_170737 3772 Hs.411299 NM_002243 ENSG00000157551 KCNJ15 IRKK|KIR1.3|KIR4.2 potassium voltage-gated channel subfamily J member 15 protein-coding chr3-1727 chr3 113769620 113769830 + 15.3 0.000 intron (NM_001690, intron 1 of 14) intron (NM_001690, intron 1 of 14) 22690 NM_001690 523 Hs.477155 NM_001690 ENSG00000114573 ATP6V1A ARCL2D|ATP6A1|ATP6V1A1|HO68|IECEE3|VA68|VPP2|Vma1 ATPase H+ transporting V1 subunit A protein-coding chr16-1836 chr16 61792400 61792610 + 15.3 0.000 intron (NM_001796, intron 7 of 11) intron (NM_001796, intron 7 of 11) 243933 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr9-947 chr9 135790810 135791020 + 15.3 0.000 intron (NM_001272003, intron 29 of 30) intron (NM_001272003, intron 29 of 30) 88730 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr1-2001 chr1 32236182 32236392 + 15.3 0.000 intron (NR_026850, intron 3 of 6) Tigger7|DNA|TcMar-Tigger 5423 NR_026850 339483 Hs.471067 NR_026850 MTMR9LP MTMR9L myotubularin related protein 9 like, pseudogene pseudo chr6-1111 chr6 118935137 118935347 + 15.3 0.000 promoter-TSS (NM_153255) promoter-TSS (NM_153255) -80 NM_153255 254394 Hs.279008 NM_017696 ENSG00000111877 MCM9 C6orf61|MCMDC1|ODG4|dJ329L24.1|dJ329L24.3 minichromosome maintenance 9 homologous recombination repair factor protein-coding chr2-2565 chr2 222722556 222722766 + 15.3 0.000 Intergenic Intergenic 51003 NM_058165 116255 Hs.344090 NM_058165 ENSG00000124003 MOGAT1 DGAT2L|DGAT2L1|MGAT1 monoacylglycerol O-acyltransferase 1 protein-coding chr2-1918 chr2 186570636 186570846 + 15.3 0.000 Intergenic AluJb|SINE|Alu -19315 NM_001145000 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr19-533 chr19 32405918 32406128 + 15.3 0.000 promoter-TSS (NR_046201) promoter-TSS (NR_046201) -102 NM_207325 147991 Hs.194392 NM_207325 ENSG00000178904 DPY19L3 - dpy-19 like C-mannosyltransferase 3 protein-coding chr15-1520 chr15 59335185 59335395 + 15.3 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 37581 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr6-470 chr6 11537545 11537755 + 15.3 0.000 promoter-TSS (NM_001100829) promoter-TSS (NM_001100829) -99 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr10-1848 chr10 62026649 62026859 + 15.3 0.000 intron (NM_032199, intron 4 of 9) intron (NM_032199, intron 4 of 9) -22603 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr1-3342 chr1 35641558 35641768 + 15.3 0.000 promoter-TSS (NM_001199779) promoter-TSS (NM_001199779) -137 NM_001199779 5690 Hs.471441 NM_002794 ENSG00000126067 PSMB2 HC7-I proteasome subunit beta 2 protein-coding chr11-1897 chr11 46285300 46285510 + 15.3 0.000 intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 7743 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr2-1868 chr2 26932352 26932562 + 15.3 0.000 intron (NM_020134, intron 6 of 12) intron (NM_020134, intron 6 of 12) -38180 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr2-2531 chr2 191263089 191263299 + 15.3 0.000 intron (NM_012223, intron 1 of 28) intron (NM_012223, intron 1 of 28) 17790 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr19-2703 chr19 18967724 18967934 + 15.3 0.000 Intergenic Intergenic -26612 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr2-2532 chr2 191264544 191264754 + 15.3 0.000 intron (NM_012223, intron 1 of 28) intron (NM_012223, intron 1 of 28) 19245 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr15-827 chr15 98671705 98671915 + 15.3 0.000 intron (NM_000875, intron 1 of 20) intron (NM_000875, intron 1 of 20) -20589 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr11-1435 chr11 66221190 66221400 + 15.3 0.000 intron (NM_018026, intron 10 of 23) intron (NM_018026, intron 10 of 23) -35999 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr6-1358 chr6 46998553 46998763 + 15.3 0.000 3' UTR (NM_153840, exon 15 of 15) 3' UTR (NM_153840, exon 15 of 15) 43674 NM_025048 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr2-2705 chr2 42722590 42722800 + 15.3 0.000 intron (NM_001330443, intron 15 of 16) intron (NM_001330443, intron 15 of 16) 41566 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr1-916 chr1 35930883 35931093 + 15.3 0.000 promoter-TSS (NM_024852) promoter-TSS (NM_024852) -117 NM_024852 192669 Hs.657659 NM_024852 ENSG00000126070 AGO3 EIF2C3 argonaute RISC catalytic component 3 protein-coding chr19-1265 chr19 8321304 8321514 + 15.3 0.000 promoter-TSS (NR_135539) promoter-TSS (NR_135539) 4 NR_135539 4701 Hs.333427 NM_005001 ENSG00000267855 NDUFA7 B14.5a|CI-B14.5a NADH:ubiquinone oxidoreductase subunit A7 protein-coding chr1-2273 chr1 226201121 226201331 + 15.3 0.000 Intergenic Intergenic -14485 NM_022735 64746 Hs.520207 NM_022735 ENSG00000182827 ACBD3 GCP60|GOCAP1|GOLPH1|PAP7 acyl-CoA binding domain containing 3 protein-coding chr9-2173 chr9 129495350 129495560 + 15.3 0.000 intron (NR_038955, intron 2 of 4) intron (NR_038955, intron 2 of 4) 6795 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr7-1488 chr7 129550842 129551052 + 15.3 0.000 Intergenic Intergenic 48416 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr6-1811 chr6 137926355 137926565 + 15.3 0.000 Intergenic Intergenic 19340 NR_149097 105378020 Hs.520420 NR_149097 ENSG00000226004 LINC02528 - long intergenic non-protein coding RNA 2528 ncRNA chr3-2577 chr3 119352789 119352999 + 15.3 0.000 intron (NM_020754, intron 1 of 11) intron (NM_020754, intron 1 of 11) -30134 NR_046748 100874246 Hs.607097 NR_046748 ENSG00000241155 ARHGAP31-AS1 - ARHGAP31 antisense RNA 1 ncRNA chr4-1417 chr4 17059277 17059487 + 15.3 0.000 Intergenic Intergenic 126675 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr8-2089 chr8 133129991 133130201 + 15.3 0.000 intron (NM_003235, intron 45 of 47) MIR|SINE|MIR -27494 NM_001045556 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr5-1882 chr5 149632665 149632875 + 15.3 0.000 3' UTR (NM_001001669, exon 13 of 13) 3' UTR (NM_001001669, exon 13 of 13) 51272 NM_001001669 389337 Hs.256206 NM_001001669 ENSG00000183111 ARHGEF37 - Rho guanine nucleotide exchange factor 37 protein-coding chr11-1791 chr11 72865213 72865423 + 15.3 0.000 intron (NM_014824, intron 13 of 19) intron (NM_014824, intron 13 of 19) 50907 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr16-2285 chr16 4649002 4649212 + 15.3 0.000 intron (NM_001142290, intron 1 of 16) intron (NM_001142290, intron 1 of 16) -22211 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr1-2598 chr1 62356536 62356746 + 15.3 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -37207 NM_001320269 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chr10-1322 chr10 84826809 84827019 + 15.3 0.000 Intergenic Intergenic 371991 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr6-2149 chr6 14354810 14355020 + 15.3 0.000 Intergenic Intergenic -69461 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr1-4822 chr1 22696504 22696714 + 15.3 0.000 Intergenic MIRb|SINE|MIR -14229 NM_017449 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr7-649 chr7 76294705 76294915 + 15.3 0.000 Intergenic Intergenic -7863 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr22-827 chr22 32893572 32893782 + 15.3 0.000 intron (NM_003490, intron 4 of 13) intron (NM_003490, intron 4 of 13) 92861 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr3-3158 chr3 170909589 170909799 + 15.3 0.000 Intergenic Intergenic -1057 NM_020390 56648 Hs.164144 NM_020390 ENSG00000163577 EIF5A2 EIF-5A2|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding chr22-473 chr22 49966799 49967009 + 15.3 0.000 Intergenic Intergenic 4038 NR_106879 102465493 NR_106879 ENSG00000276753 MIR6821 hsa-mir-6821 microRNA 6821 ncRNA chr1-4331 chr1 51969522 51969732 + 15.3 0.000 intron (NM_002867, intron 2 of 4) LTR79|LTR|ERVL 21073 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr21-456 chr21 46599119 46599329 + 15.3 0.000 3' UTR (NM_006272, exon 3 of 3) 3' UTR (NM_006272, exon 3 of 3) 5858 NM_006272 6285 Hs.422181 NM_006272 ENSG00000160307 S100B NEF|S100|S100-B|S100beta S100 calcium binding protein B protein-coding chr17-998 chr17 75693841 75694051 + 15.3 0.000 intron (NR_126037, intron 4 of 8) intron (NR_126037, intron 4 of 8) 26608 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr9-2876 chr9 130332087 130332297 + 15.3 0.000 intron (NM_001291815, intron 22 of 97) intron (NM_001291815, intron 22 of 97) 66432 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr22-882 chr22 46024322 46024532 + 15.3 0.000 Intergenic L2c|LINE|L2 17811 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo chr15-465 chr15 60371733 60371943 + 15.3 0.000 intron (NM_001002857, intron 4 of 13) intron (NM_001002857, intron 4 of 13) 26148 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr3-2433 chr3 13465432 13465642 + 15.3 0.000 Intergenic Intergenic 14516 NR_046690 100874101 Hs.535701 NR_046690 ENSG00000244502 HDAC11-AS1 - HDAC11 antisense RNA 1 ncRNA chr7-2119 chr7 27364474 27364684 + 15.3 0.000 Intergenic Intergenic -117350 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr20-331 chr20 58550759 58550969 + 15.3 0.000 intron (NR_034147, intron 6 of 6) intron (NR_034147, intron 6 of 6) -35465 NM_153360 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding chr19-3611 chr19 55109302 55109512 + 15.3 0.000 intron (NM_001271618, intron 3 of 21) intron (NM_001271618, intron 3 of 21) 8230 NM_017607 54776 Hs.631579 NM_017607 ENSG00000125503 PPP1R12C AAVS1|LENG3|MBS85|p84|p85 protein phosphatase 1 regulatory subunit 12C protein-coding chr13-1220 chr13 75391371 75391581 + 15.3 0.000 intron (NM_001286658, intron 1 of 19) L2a|LINE|L2 90692 NM_001286658 9882 Hs.210891 NM_014832 ENSG00000136111 TBC1D4 AS160|NIDDM5 TBC1 domain family member 4 protein-coding chr13-407 chr13 112588133 112588343 + 15.3 0.000 promoter-TSS (NM_001286279) promoter-TSS (NM_001286279) -53 NM_001286279 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr17-4141 chr17 82312479 82312689 + 15.3 0.000 Intergenic AluSc5|SINE|Alu 5024 NM_006137 924 Hs.36972 NM_006137 ENSG00000173762 CD7 GP40|LEU-9|TP41|Tp40 CD7 molecule protein-coding chr2-1862 chr2 20593640 20593850 + 15.3 0.000 Intergenic Intergenic -1197 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr10-1174 chr10 49552165 49552375 + 15.3 0.000 Intergenic LTR23|LTR|ERV1 -12732 NM_001277059 2074 Hs.49063 NM_000124 ENSG00000225830 ERCC6 ARMD5|CKN2|COFS|COFS1|CSB|CSB-PGBD3|POF11|RAD26|UVSS1 ERCC excision repair 6, chromatin remodeling factor protein-coding chr18-429 chr18 8870577 8870787 + 15.3 0.000 Intergenic Intergenic 153301 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr3-1117 chr3 141876580 141876790 + 15.3 0.000 promoter-TSS (NM_001679) promoter-TSS (NM_001679) 42 NM_001679 483 Hs.477789 NM_001679 ENSG00000069849 ATP1B3 ATPB-3|CD298 ATPase Na+/K+ transporting subunit beta 3 protein-coding chr2-3151 chr2 191266366 191266576 + 15.3 0.000 intron (NM_012223, intron 1 of 28) intron (NM_012223, intron 1 of 28) 21067 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr17-1214 chr17 4215455 4215665 + 15.3 0.000 intron (NR_047571, intron 3 of 23) intron (NR_047571, intron 3 of 23) 48287 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chr10-1794 chr10 87579176 87579386 + 15.3 0.000 Intergenic Intergenic 71448 NM_001178118 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding chr7-1635 chr7 29564100 29564310 + 15.3 0.000 5' UTR (NM_175887, exon 1 of 2) 5' UTR (NM_175887, exon 1 of 2) 370 NM_001329996 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding chr8-417 chr8 133297412 133297622 + 15.3 0.000 promoter-TSS (NM_001258432) promoter-TSS (NM_001258432) -213 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr10-1445 chr10 62454666 62454876 + 15.3 0.000 intron (NM_199451, intron 3 of 7) L2c|LINE|L2 -65677 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr8-654 chr8 125546057 125546267 + 15.3 0.000 Intergenic Intergenic 113953 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr2-1376 chr2 25851791 25852001 + 15.3 0.000 intron (NM_018263, intron 1 of 11) AluSz6|SINE|Alu -20995 NM_001369346 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr19-1016 chr19 22634066 22634276 + 15.3 0.000 promoter-TSS (NM_020855) promoter-TSS (NM_020855) -153 NM_020855 57615 Hs.232108 NM_020855 ENSG00000229676 ZNF492 ZNF115 zinc finger protein 492 protein-coding chr9-1976 chr9 110969966 110970176 + 15.3 0.000 intron (NM_001351417, intron 4 of 5) intron (NM_001351417, intron 4 of 5) 66709 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr2-1547 chr2 212364121 212364331 + 15.3 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 62134 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr7-1942 chr7 66764072 66764282 + 15.3 0.000 intron (NM_001367731, intron 3 of 10) L1MB7|LINE|L1 8295 NM_001287061 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr2-1779 chr2 207167057 207167267 + 15.3 0.000 promoter-TSS (NM_001270943) promoter-TSS (NM_001270943) 84 NM_001270943 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr2-900 chr2 121241867 121242077 + 15.3 0.000 intron (NM_014553, intron 7 of 14) L1ME4b|LINE|L1 43230 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr12-1894 chr12 65464928 65465138 + 15.3 0.000 3' UTR (NM_198080, exon 6 of 6) 3' UTR (NM_198080, exon 6 of 6) 92278 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr3-3039 chr3 123633952 123634162 + 15.3 0.000 intron (NM_001321309, intron 28 of 32) intron (NM_001321309, intron 28 of 32) -13509 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr9-1981 chr9 115023192 115023402 + 15.3 0.000 intron (NM_002160, intron 27 of 27) intron (NM_002160, intron 27 of 27) -92702 NM_001244 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr17-1535 chr17 80752418 80752628 + 15.3 0.000 intron (NM_020761, intron 5 of 33) intron (NM_020761, intron 5 of 33) 53109 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr1-5036 chr1 85456924 85457134 + 15.3 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) 8130 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr14-542 chr14 49693344 49693554 + 15.3 0.000 intron (NM_172193, intron 1 of 12) CpG 329 NM_172193 122773 Hs.509258 NM_172193 ENSG00000197776 KLHDC1 MST025 kelch domain containing 1 protein-coding chr1-1682 chr1 84574029 84574239 + 15.3 0.000 intron (NM_004388, intron 1 of 6) intron (NM_004388, intron 1 of 6) 306 NM_004388 1486 Hs.513557 NM_004388 ENSG00000117151 CTBS CTB chitobiase protein-coding chr5-791 chr5 14809758 14809968 + 15.3 0.000 intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 16149 NR_039780 100616271 NR_039780 ENSG00000264792 MIR4637 - microRNA 4637 ncRNA chr8-2561 chr8 38054970 38055180 + 15.3 0.000 intron (NM_004095, intron 1 of 2) intron (NM_004095, intron 1 of 2) 24541 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr8-2396 chr8 56604996 56605206 + 15.3 0.000 Intergenic Intergenic -45278 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr13-1035 chr13 75196232 75196442 + 15.3 0.000 Intergenic Intergenic 44044 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr3-2752 chr3 139995010 139995220 + 15.3 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 59930 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr10-1278 chr10 14594899 14595109 + 15.3 0.000 intron (NM_001282695, intron 2 of 5) L1ME1|LINE|L1 9397 NM_001282696 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr10-3587 chr10 87437595 87437805 + 15.3 0.000 Intergenic Intergenic -30000 NR_046091 728218 Hs.713428 NR_046091 FAM245A LINC00864 family with sequence similarity 245 member A ncRNA chr7-923 chr7 1087971 1088181 + 15.3 0.000 promoter-TSS (NM_001098201) promoter-TSS (NM_001098201) -37 NM_001098201 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr8-1210 chr8 96561396 96561606 + 15.3 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) 67688 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr9-1678 chr9 81896195 81896405 + 15.3 0.000 Intergenic L1PA16|LINE|L1 -17137 NR_026851 347127 Hs.215235 NM_198509 ENSG00000240632 SPATA31D5P FAM75D5|FAM75D5P SPATA31 subfamily D member 5, pseudogene pseudo chr4-880 chr4 169080452 169080662 + 15.3 0.000 Intergenic Intergenic -70302 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr1-2270 chr1 221699582 221699792 + 15.3 0.000 Intergenic Intergenic 37213 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr1-2558 chr1 16725480 16725690 + 15.3 0.000 Intergenic tRNA-Val-GTG|tRNA|tRNA -5428 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr1-4154 chr1 15102918 15103128 + 15.3 0.000 intron (NM_201628, intron 11 of 14) AluSx1|SINE|Alu 49441 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr9-1540 chr9 133506036 133506246 + 15.3 0.000 Intergenic Intergenic 18818 NM_001080483 389827 NM_001080483 ENSG00000187616 MYMK MYOMAKER|TMEM226|TMEM8C myomaker, myoblast fusion factor protein-coding chr22-1209 chr22 30005286 30005496 + 15.3 0.000 intron (NM_153051, intron 9 of 18) intron (NM_153051, intron 9 of 18) -1658 NR_106876 102466742 NR_106876 ENSG00000275818 MIR6818 hsa-mir-6818 microRNA 6818 ncRNA chr3-1084 chr3 159763261 159763471 + 15.3 0.000 intron (NM_001197108, intron 1 of 6) CpG 5246 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr5-1150 chr5 154371682 154371892 + 15.3 0.000 intron (NM_198321, intron 4 of 11) MIR3|SINE|MIR 24681 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr22-498 chr22 32532584 32532794 + 15.3 0.000 intron (NM_003490, intron 10 of 13) intron (NM_003490, intron 10 of 13) 57452 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr3-1297 chr3 151925873 151926083 + 15.3 0.000 intron (NR_110203, intron 1 of 2) intron (NR_110203, intron 1 of 2) 2197 NR_110203 101928142 Hs.680207 NR_110202 AADACL2-AS1 - AADACL2 antisense RNA 1 ncRNA chr9-3501 chr9 20834003 20834213 + 15.3 0.000 intron (NM_017794, intron 17 of 45) L1PA11|LINE|L1 47181 NR_145762 109616992 NR_145762 ENSG00000202189 SNORA30B - small nucleolar RNA, H/ACA box 30B snoRNA chr15-991 chr15 65033687 65033897 + 15.3 0.000 Intergenic Intergenic -4153 NM_139242 123263 Hs.531615 NM_139242 ENSG00000103707 MTFMT COXPD15|FMT1|MC1DN27 mitochondrial methionyl-tRNA formyltransferase protein-coding chr6-1343 chr6 36441384 36441594 + 15.3 0.000 intron (NM_152990, intron 1 of 4) MLT1J1|LTR|ERVL-MaLR -1278 NM_001286580 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr13-739 chr13 109945607 109945817 + 15.3 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -107573 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr13-443 chr13 43363598 43363808 + 15.3 0.000 intron (NM_001347966, intron 6 of 17) intron (NM_001347966, intron 6 of 17) -85149 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr7-3164 chr7 91945620 91945830 + 15.3 0.000 intron (NM_147185, intron 1 of 49) intron (NM_147185, intron 1 of 49) 4850 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr17-1055 chr17 28370240 28370450 + 15.3 0.000 promoter-TSS (NM_000638) promoter-TSS (NM_000638) -38 NM_000638 7448 Hs.2257 NM_000638 ENSG00000109072 VTN V75|VN|VNT vitronectin protein-coding chr5-1465 chr5 72625090 72625300 + 15.3 0.000 intron (NR_105007, intron 1 of 2) intron (NR_105007, intron 1 of 2) 35474 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr16-1119 chr16 3871260 3871470 + 15.3 0.000 intron (NM_004380, intron 1 of 30) intron (NM_004380, intron 1 of 30) 8755 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr20-666 chr20 6533560 6533770 + 15.3 0.000 Intergenic Intergenic 106933 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr6-530 chr6 35327464 35327674 + 15.3 0.000 Intergenic Intergenic -14989 NM_001171819 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr9-1399 chr9 104068624 104068834 + 15.3 0.000 Intergenic Intergenic 23745 NR_121580 101928550 Hs.144722 NR_121580 ENSG00000270332 SMC2-AS1 - SMC2 antisense RNA 1 (head to head) ncRNA chr10-2653 chr10 93108461 93108671 + 15.3 0.000 Intergenic AluSz|SINE|Alu 34673 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr12-697 chr12 30694875 30695085 + 15.3 0.000 intron (NM_006390, intron 1 of 24) intron (NM_006390, intron 1 of 24) 889 NM_006390 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr17-1895 chr17 62824862 62825072 + 15.3 0.000 intron (NR_135634, intron 1 of 1) MIR3|SINE|MIR 16465 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 MARCH10-DT - MARCH10 divergent transcript ncRNA chr11-1329 chr11 123590572 123590782 + 15.3 0.000 intron (NM_020716, intron 3 of 19) intron (NM_020716, intron 3 of 19) 30415 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr18-622 chr18 10003004 10003214 + 15.3 0.000 Intergenic MER31A|LTR|ERV1 89093 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr1-2984 chr1 173123175 173123385 + 15.3 0.000 Intergenic Intergenic -72317 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr4-1369 chr4 41258909 41259119 + 15.3 0.000 intron (NM_004181, intron 3 of 8) intron (NM_004181, intron 3 of 8) 2086 NM_004181 7345 Hs.518731 NM_004181 ENSG00000154277 UCHL1 HEL-117|HEL-S-53|NDGOA|PARK5|PGP 9.5|PGP9.5|PGP95|SPG79|Uch-L1 ubiquitin C-terminal hydrolase L1 protein-coding chr7-508 chr7 6447911 6448121 + 15.3 0.000 promoter-TSS (NM_139179) promoter-TSS (NM_139179) -4 NM_001142936 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr3-1658 chr3 165206958 165207168 + 15.3 0.000 non-coding (NR_125764, exon 1 of 6) non-coding (NR_125764, exon 1 of 6) 103 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr3-3197 chr3 188160702 188160912 + 15.3 0.000 intron (NM_001167672, intron 1 of 9) L2c|LINE|L2 -6719 NR_036497 339929 Hs.596639 NR_036497 ENSG00000270959 LPP-AS2 MYCLo-5|MYCLo-6 LPP antisense RNA 2 ncRNA chr2-945 chr2 240998594 240998804 + 15.2 0.000 promoter-TSS (NM_001080437) promoter-TSS (NM_001080437) 81 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr2-5549 chr2 164000290 164000500 + 15.2 0.000 Intergenic Intergenic -264387 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr2-2069 chr2 203807988 203808198 + 15.2 0.000 Intergenic Intergenic -59678 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr13-463 chr13 32586335 32586545 + 15.2 0.000 promoter-TSS (NM_015032) promoter-TSS (NM_015032) -12 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr11-631 chr11 10931190 10931400 + 15.2 0.000 Intergenic CpG 73078 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr3-2048 chr3 133377393 133377603 + 15.2 0.000 intron (NM_001282865, intron 2 of 3) MIR|SINE|MIR -22558 NM_003571 8419 Hs.659862 NM_003571 ENSG00000170819 BFSP2 CP47|CP49|CTRCT12|LIFL-L|PHAKOSIN beaded filament structural protein 2 protein-coding chr1-2619 chr1 93625662 93625872 + 15.2 0.000 intron (NM_001261409, intron 3 of 11) intron (NM_001261409, intron 3 of 11) -11670 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr22-313 chr22 23521845 23522055 + 15.2 0.000 Intergenic CpG -16152 NR_109832 101978785 Hs.575107 NR_109832 PCAT14 - prostate cancer associated transcript 14 ncRNA chr12-2492 chr12 78393108 78393318 + 15.2 0.000 Intergenic Intergenic -33467 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr12-1841 chr12 31052732 31052942 + 15.2 0.000 intron (NR_038927, intron 2 of 2) intron (NR_038927, intron 2 of 2) 21010 NR_038927 100506660 Hs.586774 NR_038927 ENSG00000245614 DDX11-AS1 CONCR|SCAT4 DDX11 antisense RNA 1 ncRNA chr2-3221 chr2 226524604 226524814 + 15.2 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 134084 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr11-2411 chr11 9330813 9331023 + 15.2 0.000 Intergenic Intergenic -16325 NM_015012 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B - transmembrane protein 41B protein-coding chr5-2120 chr5 73061557 73061767 + 15.2 0.000 intron (NM_001146032, intron 16 of 24) intron (NM_001146032, intron 16 of 24) -58913 NM_001161342 134285 Hs.162246 NM_173490 ENSG00000157111 TMEM171 PRP2 transmembrane protein 171 protein-coding chr1-807 chr1 15524557 15524767 + 15.2 0.000 promoter-TSS (NM_001278054) promoter-TSS (NM_001278054) 128 NM_032996 842 Hs.329502 NM_001229 ENSG00000132906 CASP9 APAF-3|APAF3|ICE-LAP6|MCH6|PPP1R56 caspase 9 protein-coding chr2-2115 chr2 29228491 29228701 + 15.2 0.000 intron (NM_004304, intron 16 of 28) intron (NM_004304, intron 16 of 28) -4696 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr6-645 chr6 143060447 143060657 + 15.2 0.000 promoter-TSS (NM_001363721) promoter-TSS (NM_001363721) 89 NM_001366352 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr7-1656 chr7 71633717 71633927 + 15.2 0.000 intron (NM_022479, intron 6 of 10) intron (NM_022479, intron 6 of 10) -326052 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr5-1124 chr5 67094710 67094920 + 15.2 0.000 intron (NM_001290226, intron 4 of 26) intron (NM_001290226, intron 4 of 26) 90160 NM_001290227 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr9-1084 chr9 137383361 137383571 + 15.2 0.000 intron (NM_001286823, intron 2 of 7) intron (NM_001286823, intron 2 of 7) 39696 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr1-2575 chr1 33347033 33347243 + 15.2 0.000 intron (NM_198040, intron 8 of 13) intron (NM_198040, intron 8 of 13) 2761 NM_004427 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr19-1622 chr19 48480875 48481085 + 15.2 0.000 3' UTR (NM_004228, exon 12 of 12) 3' UTR (NM_004228, exon 12 of 12) 11611 NM_004228 9266 Hs.144011 NM_004228 ENSG00000105443 CYTH2 ARNO|CTS18|CTS18.1|PSCD2|PSCD2L|SEC7L|Sec7p-L|Sec7p-like|cytohesin-2 cytohesin 2 protein-coding chr2-1778 chr2 205683647 205683857 + 15.2 0.000 intron (NM_018534, intron 1 of 15) intron (NM_018534, intron 1 of 15) 1251 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr20-496 chr20 10622808 10623018 + 15.2 0.000 exon (NM_001009608, exon 8 of 8) exon (NM_001009608, exon 8 of 8) 26782 NR_106930 102465525 NR_106930 ENSG00000273745 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA chr15-793 chr15 61098992 61099202 + 15.2 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 130205 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr7-1490 chr7 131400784 131400994 + 15.2 0.000 intron (NM_001321316, intron 6 of 17) intron (NM_001321316, intron 6 of 17) 73013 NM_001321316 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr19-1044 chr19 38270537 38270747 + 15.2 0.000 intron (NM_001166103, intron 1 of 5) intron (NM_001166103, intron 1 of 5) 6069 NM_021102 10653 Hs.31439 NM_021102 ENSG00000167642 SPINT2 DIAR3|HAI-2|HAI2|Kop|PB serine peptidase inhibitor, Kunitz type 2 protein-coding chr13-1182 chr13 42807918 42808128 + 15.2 0.000 Intergenic L2|LINE|L2 4539 NR_125747 103689845 Hs.422131 NR_125747 ENSG00000271216 LINC01050 - long intergenic non-protein coding RNA 1050 ncRNA chr10-626 chr10 22554680 22554890 + 15.2 0.000 intron (NM_005028, intron 6 of 9) intron (NM_005028, intron 6 of 9) -116856 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr3-2457 chr3 71875546 71875756 + 15.2 0.000 Intergenic Intergenic -90503 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr5-1410 chr5 158718737 158718947 + 15.2 0.000 intron (NM_001324107, intron 11 of 15) intron (NM_001324107, intron 11 of 15) -309069 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr20-926 chr20 4761737 4761947 + 15.2 0.000 Intergenic MER44C|DNA|TcMar-Tigger -21174 NR_024268 149830 Hs.126516 NM_177549 ENSG00000180259 PRNT M8 prion locus lncRNA, testis expressed ncRNA chr1-1227 chr1 25906379 25906589 + 15.2 0.000 promoter-TSS (NR_037481) promoter-TSS (NR_037481) -30 NR_037481 100500808 NR_037481 ENSG00000283938 MIR3917 mir-3917 microRNA 3917 ncRNA chr12-700 chr12 48818489 48818699 + 15.2 0.000 promoter-TSS (NM_000725) promoter-TSS (NM_000725) 98 NM_001206915 784 Hs.250712 NM_000725 ENSG00000167535 CACNB3 CAB3|CACNLB3 calcium voltage-gated channel auxiliary subunit beta 3 protein-coding chr5-2369 chr5 81882295 81882505 + 15.2 0.000 Intergenic Intergenic -89623 NM_001131028 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding chr15-376 chr15 43800302 43800512 + 15.2 0.000 promoter-TSS (NM_016400) promoter-TSS (NM_016400) -14 NM_016400 25764 Hs.730672 NM_016400 ENSG00000242028 HYPK C15orf63|HSPC136 huntingtin interacting protein K protein-coding chr11-1452 chr11 75454438 75454648 + 15.2 0.000 intron (NM_030792, intron 6 of 16) L1ME4b|LINE|L1 -2216 NM_001351167 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr8-2663 chr8 81186901 81187111 + 15.2 0.000 Intergenic Intergenic -74938 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr6-1562 chr6 155796 156006 + 15.2 0.000 Intergenic Intergenic -7742 NR_109817 441123 NR_109817 LINC00266-3 C6orf88|NCRNA00266-3|NCRNA00266C|dJ24O22.2 long intergenic non-protein coding RNA 266-3 ncRNA chr17-1110 chr17 1988336 1988546 + 15.2 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -29275 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr17-1167 chr17 38869127 38869337 + 15.2 0.000 promoter-TSS (NM_006148) promoter-TSS (NM_006148) -627 NM_001271608 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr22-812 chr22 44384504 44384714 + 15.2 0.000 Intergenic Intergenic -58718 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 - long intergenic non-protein coding RNA 1656 ncRNA chr6-1524 chr6 35092538 35092748 + 15.2 0.000 Intergenic Intergenic 48696 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr4-1779 chr4 1801907 1802117 + 15.2 0.000 exon (NM_000142, exon 7 of 18) exon (NM_000142, exon 7 of 18) 8700 NM_001163213 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr7-549 chr7 953585 953795 + 15.2 0.000 intron (NM_001284308, intron 1 of 10) intron (NM_001284308, intron 1 of 10) 990 NM_006869 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr9-1277 chr9 3906848 3907058 + 15.2 0.000 intron (NM_001042413, intron 6 of 10) intron (NM_001042413, intron 6 of 10) 8307 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr7-1930 chr7 40052503 40052713 + 15.2 0.000 intron (NM_003718, intron 7 of 13) intron (NM_003718, intron 7 of 13) 82014 NM_138701 136647 Hs.654989 NM_138701 ENSG00000168303 MPLKIP ABHS|C7orf11|ORF20|TTD4 M-phase specific PLK1 interacting protein protein-coding chr3-4305 chr3 160707561 160707771 + 15.2 0.000 Intergenic Intergenic 30506 NM_025047 80117 Hs.287702 NM_025047 ENSG00000179674 ARL14 ARF7 ADP ribosylation factor like GTPase 14 protein-coding chr17-1384 chr17 82866882 82867092 + 15.2 0.000 intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) -26965 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr1-1127 chr1 154961522 154961732 + 15.2 0.000 TTS (NM_001130040) TTS (NM_001130040) 155 NM_138300 90780 Hs.533597 NM_138300 ENSG00000163348 PYGO2 1190004M21Rik pygopus family PHD finger 2 protein-coding chr20-1382 chr20 62657889 62658099 + 15.2 0.000 intron (NM_016354, intron 2 of 11) intron (NM_016354, intron 2 of 11) 8627 NR_024470 100127888 Hs.671273 NR_024470 ENSG00000232803 SLCO4A1-AS1 - SLCO4A1 antisense RNA 1 ncRNA chr1-2156 chr1 20100950 20101160 + 15.2 0.000 Intergenic Intergenic 18481 NM_012400 26279 Hs.189507 NM_012400 ENSG00000117215 PLA2G2D PLA2IID|SPLASH|sPLA2-IID|sPLA2S phospholipase A2 group IID protein-coding chr12-2213 chr12 46187314 46187524 + 15.2 0.000 3' UTR (NM_001278387, exon 18 of 18) 3' UTR (NM_001278387, exon 18 of 18) 79097 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr2-2062 chr2 190469068 190469278 + 15.2 0.000 intron (NM_017694, intron 3 of 7) intron (NM_017694, intron 3 of 7) 60818 NM_017694 54842 Hs.418581 NM_017694 ENSG00000151690 MFSD6 MMR2|hMMR2 major facilitator superfamily domain containing 6 protein-coding chr7-2348 chr7 2009391 2009601 + 15.2 0.000 intron (NM_001013837, intron 13 of 18) intron (NM_001013837, intron 13 of 18) -68925 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chrX-135 chrX 41923576 41923786 + 15.2 0.000 promoter-TSS (NM_001367721) promoter-TSS (NM_001367721) -127 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr4-1707 chr4 173436213 173436423 + 15.2 0.000 intron (NM_001329597, intron 2 of 3) intron (NM_001329597, intron 2 of 3) -37202 NM_007281 11341 Hs.7122 NM_007281 ENSG00000164106 SCRG1 SCRG-1 stimulator of chondrogenesis 1 protein-coding chr3-1898 chr3 149448256 149448466 + 15.2 0.000 Intergenic Intergenic -26336 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr3-1474 chr3 69094432 69094642 + 15.2 0.000 intron (NM_006407, intron 1 of 2) intron (NM_006407, intron 1 of 2) 9600 NM_006407 10550 Hs.518060 NM_006407 ENSG00000144746 ARL6IP5 DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx ADP ribosylation factor like GTPase 6 interacting protein 5 protein-coding chr2-1957 chr2 235064022 235064232 + 15.2 0.000 Intergenic L2c|LINE|L2 36392 NM_001371306 chr4-2091 chr4 38981369 38981579 + 15.2 0.000 intron (NM_024943, intron 5 of 6) intron (NM_024943, intron 5 of 6) 50935 NM_001303228 80008 Hs.374147 NM_024943 ENSG00000121895 TMEM156 - transmembrane protein 156 protein-coding chr2-3016 chr2 55761624 55761834 + 15.2 0.000 Intergenic Intergenic -67885 NM_033109 87178 Hs.388733 NM_033109 ENSG00000138035 PNPT1 COXPD13|DFNB70|OLD35|PNPASE|old-35 polyribonucleotide nucleotidyltransferase 1 protein-coding chr10-1856 chr10 72259702 72259912 + 15.2 0.000 Intergenic Intergenic -14117 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr2-1715 chr2 207530662 207530872 + 15.2 0.000 intron (NR_163946, intron 1 of 8) intron (NR_163946, intron 1 of 8) 805 NM_001371427 chr18-276 chr18 76493034 76493244 + 15.2 0.000 non-coding (NR_136504, exon 2 of 2) non-coding (NR_136504, exon 2 of 2) 1487 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr10-3137 chr10 58950690 58950900 + 15.2 0.000 Intergenic Intergenic -48723 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA chr4-1813 chr4 57374155 57374365 + 15.2 0.000 Intergenic MER21C|LTR|ERVL -51612 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr10-1661 chr10 113026792 113027002 + 15.2 0.000 intron (NM_001367943, intron 4 of 14) intron (NM_001367943, intron 4 of 14) -18458 NR_132769 106635520 NR_132769 SNORA87 - small nucleolar RNA, H/ACA box 87 snoRNA chr7-792 chr7 43756815 43757025 + 15.2 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -1753 NM_001253823 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chr11-1614 chr11 61369765 61369975 + 15.2 0.000 TTS (NM_001330281) TTS (NM_001330281) 7496 NM_001330281 51524 Hs.406530 NM_016464 ENSG00000149483 TMEM138 HSPC196 transmembrane protein 138 protein-coding chr17-1630 chr17 2442085 2442295 + 15.2 0.000 intron (NM_024086, intron 6 of 9) L1ME1|LINE|L1 -26754 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr4-804 chr4 60884768 60884978 + 15.2 0.000 Intergenic Intergenic -37746 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr2-2056 chr2 177351969 177352179 + 15.2 0.000 intron (NR_026966, intron 1 of 8) intron (NR_026966, intron 1 of 8) -38192 NR_106767 102465255 NR_106767 ENSG00000278418 MIR6512 hsa-mir-6512|mir-6512 microRNA 6512 ncRNA chr5-1865 chr5 140295466 140295676 + 15.2 0.000 intron (NM_002622, intron 2 of 3) intron (NM_002622, intron 2 of 3) 7530 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr3-615 chr3 129626757 129626967 + 15.2 0.000 Intergenic CpG -20123 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr14-550 chr14 90256392 90256602 + 15.2 0.000 promoter-TSS (NM_002802) promoter-TSS (NM_002802) -56 NM_002802 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr10-2022 chr10 69869769 69869979 + 15.2 0.000 intron (NM_001368898, intron 3 of 33) intron (NM_001368898, intron 3 of 33) 67968 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr16-901 chr16 23423586 23423796 + 15.2 0.000 intron (NM_153603, intron 7 of 16) intron (NM_153603, intron 7 of 16) 29498 NM_153603 91949 Hs.185807 NM_153603 ENSG00000168434 COG7 CDG2E component of oligomeric golgi complex 7 protein-coding chr1-2494 chr1 162497783 162497993 + 15.2 0.000 promoter-TSS (NM_175866) promoter-TSS (NM_175866) 70 NM_175866 127933 Hs.127310 NM_144624 ENSG00000152332 UHMK1 KIS|KIST|P-CIP2 U2AF homology motif kinase 1 protein-coding chr22-1276 chr22 32950747 32950957 + 15.2 0.000 intron (NM_003490, intron 3 of 13) intron (NM_003490, intron 3 of 13) 55969 NM_133633 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr21-212 chr21 16303080 16303290 + 15.2 0.000 intron (NR_027790, intron 4 of 7) intron (NR_027790, intron 4 of 7) -18417 NR_145757 109617014 NR_145757 ENSG00000201025 SNORD74B - small nucleolar RNA, C/D box 74B snoRNA chr9-1396 chr9 98223144 98223354 + 15.2 0.000 intron (NR_051978, intron 4 of 11) L2b|LINE|L2 5968 NR_106913 102465514 NR_106913 ENSG00000278412 MIR6854 hsa-mir-6854 microRNA 6854 ncRNA chr6-739 chr6 3139430 3139640 + 15.2 0.000 intron (NR_026649, intron 6 of 7) intron (NR_026649, intron 6 of 7) 18009 NM_001069 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr20-277 chr20 46814928 46815138 + 15.2 0.000 Intergenic Intergenic -79591 NM_172110 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr1-2917 chr1 24393969 24394179 + 15.2 0.000 intron (NM_001199014, intron 2 of 9) L1ME3A|LINE|L1 -19413 NM_001322854 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr2-1829 chr2 127810474 127810684 + 15.2 0.000 intron (NM_001006622, intron 1 of 5) intron (NM_001006622, intron 1 of 5) 592 NM_001006623 55339 Hs.554831 NM_018383 ENSG00000136709 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding chr15-1180 chr15 36029728 36029938 + 15.2 0.000 Intergenic Eulor6B|DNA?|DNA? 102977 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr7-1133 chr7 24573272 24573482 + 15.2 0.000 promoter-TSS (NM_001303037) promoter-TSS (NM_001303037) -75 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr11-1316 chr11 70091007 70091217 + 15.2 0.000 intron (NM_018043, intron 2 of 25) intron (NM_018043, intron 2 of 25) 5702 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr7-876 chr7 116953518 116953728 + 15.2 0.000 promoter-TSS (NR_002329) promoter-TSS (NR_002329) 122 NM_001369607 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr15-1016 chr15 80480990 80481200 + 15.2 0.000 intron (NM_014862, intron 5 of 18) intron (NM_014862, intron 5 of 18) 76713 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr19-1213 chr19 4872681 4872891 + 15.2 0.000 Intergenic Intergenic -5119 NM_001164189 10226 Hs.140452 NM_005817 ENSG00000105355 PLIN3 M6PRBP1|PP17|TIP47 perilipin 3 protein-coding chr8-665 chr8 30426009 30426219 + 15.2 0.000 intron (NM_001008710, intron 1 of 8) intron (NM_001008710, intron 1 of 8) -40713 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr17-767 chr17 29566848 29567058 + 15.2 0.000 promoter-TSS (NM_198147) promoter-TSS (NM_198147) 84 NM_198147 116236 Hs.106510 NM_198147 ENSG00000168792 ABHD15 - abhydrolase domain containing 15 protein-coding chr6-963 chr6 41049597 41049807 + 15.2 0.000 Intergenic Intergenic -3499 NM_006789 10930 Hs.555915 NM_006789 ENSG00000124701 APOBEC2 ARCD1|ARP1 apolipoprotein B mRNA editing enzyme catalytic subunit 2 protein-coding chr3-2334 chr3 136142618 136142828 + 15.2 0.000 intron (NM_181897, intron 12 of 12) L2b|LINE|L2 51745 NM_001145417 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr15-566 chr15 75844005 75844215 + 15.2 0.000 promoter-TSS (NM_001145335) promoter-TSS (NM_001145335) 66 NM_001145335 92912 Hs.23033 NM_173469 ENSG00000140367 UBE2Q2 - ubiquitin conjugating enzyme E2 Q2 protein-coding chr7-1496 chr7 140349118 140349328 + 15.2 0.000 intron (NM_001363376, intron 7 of 12) intron (NM_001363376, intron 7 of 12) 49307 NM_001363375 84255 Hs.446021 NM_032295 ENSG00000157800 SLC37A3 - solute carrier family 37 member 3 protein-coding chr10-1190 chr10 93816204 93816414 + 15.2 0.000 Intergenic Intergenic 58373 NM_005097 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr1-3158 chr1 77957147 77957357 + 15.2 0.000 intron (NM_003902, intron 16 of 19) intron (NM_003902, intron 16 of 19) 21820 NR_130152 8880 Hs.567380 NM_003902 ENSG00000162613 FUBP1 FBP|FUBP|hDH V far upstream element binding protein 1 protein-coding chr2-946 chr2 8229700 8229910 + 15.2 0.000 intron (NR_152741, intron 9 of 9) ERV3-16A3_LTR|LTR|ERVL 98614 NR_034135 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr20-628 chr20 41177762 41177972 + 15.2 0.000 TTS (NM_002660) TTS (NM_002660) 8844 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr14-1050 chr14 50530283 50530493 + 15.2 0.000 intron (NM_198794, intron 2 of 31) intron (NM_198794, intron 2 of 31) 2181 NM_198794 11183 Hs.130491 NM_006575 ENSG00000012983 MAP4K5 GCKR|KHS|KHS1|MAPKKKK5 mitogen-activated protein kinase kinase kinase kinase 5 protein-coding chr5-1505 chr5 137565459 137565669 + 15.2 0.000 Intergenic Intergenic -66238 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr1-1138 chr1 206635279 206635489 + 15.2 0.000 promoter-TSS (NM_003582) promoter-TSS (NM_003582) -152 NM_003582 8444 Hs.164267 NM_003582 ENSG00000143479 DYRK3 DYRK5|RED|REDK|hYAK3-2 dual specificity tyrosine phosphorylation regulated kinase 3 protein-coding chr5-2428 chr5 121366600 121366810 + 15.2 0.000 Intergenic Intergenic 44155 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr5-2508 chr5 154723968 154724178 + 15.2 0.000 intron (NM_001367717, intron 1 of 18) intron (NM_001367717, intron 1 of 18) 11230 NM_015315 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr12-413 chr12 22625045 22625255 + 15.2 0.000 promoter-TSS (NR_135030) promoter-TSS (NR_135030) -21 NM_018638 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr20-608 chr20 2151823 2152033 + 15.2 0.000 Intergenic Intergenic 50101 NM_080836 140901 Hs.100057 NM_080836 ENSG00000125834 STK35 CLIK1|STK35L1 serine/threonine kinase 35 protein-coding chr10-1198 chr10 124355085 124355295 + 15.2 0.000 Intergenic Intergenic 63733 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr2-2639 chr2 127055233 127055443 + 15.2 0.000 intron (NM_139344, intron 11 of 17) intron (NM_139344, intron 11 of 17) 26727 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr2-2956 chr2 25494621 25494831 + 15.2 0.000 intron (NM_033147, intron 9 of 19) intron (NM_033147, intron 9 of 19) -152136 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr19-1930 chr19 4696683 4696893 + 15.2 0.000 intron (NM_139159, intron 11 of 21) AluJo|SINE|Alu 17506 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr9-1184 chr9 97013440 97013650 + 15.2 0.000 promoter-TSS (NM_001355229) promoter-TSS (NM_001355229) 60 NM_001355229 84278 Hs.610084 NM_001355228 ENSG00000196312 MFSD14C HIATL2 major facilitator superfamily domain containing 14C protein-coding chr16-910 chr16 66717122 66717332 + 15.2 0.000 Intergenic Intergenic -20484 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr1-3259 chr1 207054699 207054909 + 15.2 0.000 intron (NM_006212, intron 2 of 14) intron (NM_006212, intron 2 of 14) 1529 NM_006212 5208 Hs.282702 NM_006212 ENSG00000123836 PFKFB2 PFK-2/FBPase-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 protein-coding chr2-2265 chr2 7880957 7881167 + 15.2 0.000 Intergenic Intergenic 18593 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr2-1151 chr2 109213829 109214039 + 15.2 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -72346 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr12-1099 chr12 120496688 120496898 + 15.2 0.000 promoter-TSS (NR_038854) promoter-TSS (NR_038854) 680 NM_001037495 8655 Hs.5120 NM_003746 ENSG00000088986 DYNLL1 DLC1|DLC8|DNCL1|DNCLC1|LC8|LC8a|PIN|hdlc1 dynein light chain LC8-type 1 protein-coding chr15-1431 chr15 66880044 66880254 + 15.2 0.000 Intergenic Intergenic 76366 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr18-575 chr18 76662047 76662257 + 15.2 0.000 Intergenic AluJo|SINE|Alu -23141 NR_110784 101927651 Hs.569848 NR_110784 LINC01927 - long intergenic non-protein coding RNA 1927 ncRNA chr9-622 chr9 122093219 122093429 + 15.2 0.000 exon (NM_001139442, exon 1 of 9) exon (NM_001139442, exon 1 of 9) 282 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr11-2086 chr11 101974259 101974469 + 15.2 0.000 intron (NM_001363543, intron 7 of 11) L3|LINE|CR1 -57842 NM_178127 253935 Hs.318370 NM_178127 ENSG00000187151 ANGPTL5 - angiopoietin like 5 protein-coding chr22-629 chr22 39388344 39388554 + 15.2 0.000 Intergenic CpG -11331 NM_006116 10454 Hs.507681 NM_006116 ENSG00000100324 TAB1 3'-Tab1|MAP3K7IP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 protein-coding chr15-926 chr15 70538229 70538439 + 15.2 0.000 Intergenic Intergenic -32406 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr1-3127 chr1 51896996 51897206 + 15.2 0.000 Intergenic Intergenic -18164 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr22-665 chr22 43777312 43777522 + 15.2 0.000 intron (NM_022785, intron 3 of 31) L2a|LINE|L2 34888 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr3-3093 chr3 137974785 137974995 + 15.2 0.000 Intergenic L2c|LINE|L2 -23926 NM_001002026 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr2-3860 chr2 36530054 36530264 + 15.2 0.000 intron (NM_016441, intron 13 of 16) intron (NM_016441, intron 13 of 16) 68009 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr17-2153 chr17 43784854 43785064 + 15.2 0.000 3' UTR (NM_001353400, exon 5 of 5) 3' UTR (NM_001353400, exon 5 of 5) 4524 NM_001136483 284067 Hs.252707 NM_001136483 ENSG00000231256 CFAP97D1 C17orf105 CFAP97 domain containing 1 protein-coding chr12-710 chr12 100573579 100573789 + 15.2 0.000 promoter-TSS (NM_001363672) promoter-TSS (NM_001363672) 0 NM_001363672 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr9-878 chr9 98791178 98791388 + 15.2 0.000 intron (NM_173551, intron 1 of 14) intron (NM_173551, intron 1 of 14) 5272 NM_173551 203286 Hs.406890 NM_173551 ENSG00000165138 ANKS6 ANKRD14|NPHP16|PKDR1|SAMD6 ankyrin repeat and sterile alpha motif domain containing 6 protein-coding chr1-4006 chr1 170742416 170742626 + 15.2 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 78390 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr6-2005 chr6 25962574 25962784 + 15.2 0.000 promoter-TSS (NM_006355) promoter-TSS (NM_006355) -123 NM_006355 10475 Hs.584851 NM_006355 ENSG00000112343 TRIM38 RNF15|RORET tripartite motif containing 38 protein-coding chr17-1137 chr17 75685064 75685274 + 15.2 0.000 intron (NR_126037, intron 3 of 8) intron (NR_126037, intron 3 of 8) 17831 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr12-1229 chr12 11906525 11906735 + 15.2 0.000 Intergenic MIR3|SINE|MIR -143231 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr16-1545 chr16 69613379 69613589 + 15.2 0.000 intron (NM_138714, intron 2 of 15) L2c|LINE|L2 47518 NM_173214 10725 Hs.371987 NM_006599 ENSG00000102908 NFAT5 NF-AT5|NFATL1|NFATZ|OREBP|TONEBP nuclear factor of activated T cells 5 protein-coding chr12-2910 chr12 53538302 53538512 + 15.2 0.000 intron (NM_001366561, intron 3 of 10) intron (NM_001366561, intron 3 of 10) 24423 NR_046221 100652999 Hs.633602 NR_046221 ENSG00000257550 LOC100652999 - uncharacterized LOC100652999 ncRNA chr17-2285 chr17 31900946 31901156 + 15.2 0.000 intron (NM_018428, intron 1 of 18) L2a|LINE|L2 657 NM_018428 55813 Hs.589862 NM_018428 ENSG00000108651 UTP6 C17orf40|HCA66 UTP6 small subunit processome component protein-coding chr10-944 chr10 28587846 28588056 + 15.2 0.000 intron (NM_100486, intron 4 of 12) Charlie10a|DNA|hAT-Charlie 54833 NM_100486 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr16-1272 chr16 64910558 64910768 + 15.2 0.000 Intergenic Intergenic 211400 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr19-1537 chr19 20661518 20661728 + 15.2 0.000 promoter-TSS (NM_145297) promoter-TSS (NM_145297) -27 NM_145297 199777 Hs.657001 NM_145297 ENSG00000188171 ZNF626 - zinc finger protein 626 protein-coding chr1-4327 chr1 48251953 48252163 + 15.2 0.000 Intergenic Intergenic 29342 NM_001135181 200010 Hs.37890 NM_001011547 ENSG00000117834 SLC5A9 SGLT4 solute carrier family 5 member 9 protein-coding chr12-691 chr12 124746091 124746301 + 15.2 0.000 Intergenic Intergenic 93475 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr16-2411 chr16 72006002 72006212 + 15.2 0.000 Intergenic Intergenic -2637 NM_001361 1723 Hs.654427 NM_001361 ENSG00000102967 DHODH DHOdehase|POADS|URA1 dihydroorotate dehydrogenase (quinone) protein-coding chr3-5484 chr3 188469397 188469607 + 15.2 0.000 intron (NM_001167672, intron 2 of 9) UCON8|DNA|DNA 99164 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr17-3064 chr17 81327374 81327584 + 15.2 0.000 Intergenic L1MB4|LINE|L1 -18231 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr17-3792 chr17 39609444 39609654 + 15.2 0.000 Intergenic Intergenic -1629 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr6-1122 chr6 142038926 142039136 + 15.2 0.000 Intergenic Intergenic 49768 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr7-1396 chr7 2269999 2270209 + 15.2 0.000 intron (NM_013321, intron 4 of 10) intron (NM_013321, intron 4 of 10) -12527 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr7-1541 chr7 157347359 157347569 + 15.2 0.000 intron (NM_005494, intron 1 of 7) FLAM_A|SINE|Alu 10460 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr8-1645 chr8 130903791 130904001 + 15.2 0.000 exon (NM_001115, exon 7 of 18) exon (NM_001115, exon 7 of 18) 137013 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr9-1191 chr9 111178460 111178670 + 15.2 0.000 Intergenic Intergenic 92649 NR_106989 102465800 NR_106989 ENSG00000274263 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA chr3-1424 chr3 189937831 189938041 + 15.2 0.000 Intergenic Intergenic 108014 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr2-2502 chr2 159211479 159211689 + 15.2 0.000 intron (NM_001350065, intron 20 of 27) intron (NM_001350065, intron 20 of 27) 24749 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr10-1167 chr10 29464586 29464796 + 15.2 0.000 intron (NM_001323599, intron 35 of 38) intron (NM_001323599, intron 35 of 38) 54448 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr16-674 chr16 70715243 70715453 + 15.2 0.000 intron (NM_001351157, intron 13 of 17) L2b|LINE|L2 -29295 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr3-1952 chr3 26995936 26996146 + 15.2 0.000 Intergenic LTR18C|LTR|ERVL 220482 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr1-2146 chr1 8439088 8439298 + 15.2 0.000 intron (NM_001042681, intron 11 of 22) intron (NM_001042681, intron 11 of 22) 14548 NR_125999 102724552 Hs.568612 NR_125999 RERE-AS1 - RERE antisense RNA 1 ncRNA chr3-1786 chr3 23959368 23959578 + 15.2 0.000 intron (NM_005126, intron 3 of 7) intron (NM_005126, intron 3 of 7) 13352 NM_001145425 9975 Hs.37288 NM_005126 ENSG00000174738 NR1D2 BD73|EAR-1R|REVERBB|REVERBbeta|RVR nuclear receptor subfamily 1 group D member 2 protein-coding chr11-2869 chr11 23988643 23988853 + 15.2 0.000 Intergenic Intergenic -508305 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr12-1980 chr12 124180209 124180419 + 15.2 0.000 intron (NM_001347902, intron 3 of 4) MLT1B-int|LTR|ERVL-MaLR -108850 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr3-1886 chr3 139774544 139774754 + 15.2 0.000 Intergenic Intergenic -96599 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr10-1075 chr10 706816 707026 + 15.2 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -17253 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr2-3074 chr2 108535182 108535392 + 15.2 0.000 intron (NM_001193483, intron 1 of 9) Charlie1a|DNA|hAT-Charlie 932 NM_001193483 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr9-691 chr9 126693611 126693821 + 15.2 0.000 intron (NM_001174146, intron 5 of 7) intron (NM_001174146, intron 5 of 7) 79273 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr9-910 chr9 98707325 98707535 + 15.2 0.000 intron (NM_005458, intron 1 of 18) CpG 1505 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr7-1292 chr7 5856370 5856580 + 15.2 0.000 Intergenic AluJr|SINE|Alu -24323 NM_001097622 654231 Hs.571315 NM_001097622 ENSG00000122543 OCM OCM1|OM|ONCM oncomodulin protein-coding chr17-1989 chr17 61157348 61157558 + 15.2 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 210251 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chrX-585 chrX 103152189 103152399 + 15.2 0.000 Intergenic Intergenic -59151 NM_022052 56000 Hs.60386 NM_022052 ENSG00000147206 NXF3 - nuclear RNA export factor 3 protein-coding chr11-770 chr11 19712621 19712831 + 15.2 0.000 promoter-TSS (NM_001244963) promoter-TSS (NM_001244963) -111 NM_182964 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr3-1513 chr3 145981187 145981397 + 15.2 0.000 Intergenic Intergenic 87893 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr7-1672 chr7 108095523 108095733 + 15.2 0.000 intron (NM_001318048, intron 11 of 17) intron (NM_001318048, intron 11 of 17) 34733 NM_001318047 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr22-634 chr22 45441239 45441449 + 15.2 0.000 Intergenic Intergenic 27651 NM_015653 26150 Hs.475110 NM_015653 ENSG00000128408 RIBC2 C22orf11|TRIB RIB43A domain with coiled-coils 2 protein-coding chr11-3504 chr11 128908600 128908810 + 15.2 0.000 intron (NM_000890, intron 1 of 2) intron (NM_000890, intron 1 of 2) -2474 NR_045767 219833 Hs.689860 NM_145013 ENSG00000174370 C11orf45 - chromosome 11 open reading frame 45 protein-coding chr8-490 chr8 22756272 22756482 + 15.2 0.000 intron (NM_001363233, intron 4 of 6) intron (NM_001363233, intron 4 of 6) -62897 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr4-1189 chr4 27920546 27920756 + 15.2 0.000 Intergenic Intergenic 703172 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr1-5919 chr1 17071444 17071654 + 15.2 0.000 intron (NM_007365, intron 13 of 15) intron (NM_007365, intron 13 of 15) -17379 NM_003000 6390 Hs.465924 NM_003000 ENSG00000117118 SDHB CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP succinate dehydrogenase complex iron sulfur subunit B protein-coding chr17-1042 chr17 78933519 78933729 + 15.2 0.000 Intergenic Intergenic -8237 NM_003255 7077 Hs.633514 NM_003255 ENSG00000035862 TIMP2 CSC-21K|DDC8 TIMP metallopeptidase inhibitor 2 protein-coding chr11-1552 chr11 47214264 47214474 + 15.2 0.000 promoter-TSS (NM_000107) promoter-TSS (NM_000107) -573 NM_000107 1643 Hs.700338 NM_000107 ENSG00000134574 DDB2 DDBB|UV-DDB2|XPE damage specific DNA binding protein 2 protein-coding chrX-457 chrX 139851792 139852002 + 15.2 0.000 intron (NM_001353812, intron 1 of 29) MSTD-int|LTR|ERVL-MaLR -19656 NM_001010986 286410 Hs.88252 NM_173694 ENSG00000101974 ATP11C ATPIG|ATPIQ|HACXL ATPase phospholipid transporting 11C protein-coding chr20-709 chr20 41003284 41003494 + 15.2 0.000 intron (NR_145525, intron 1 of 2) intron (NR_145525, intron 1 of 2) 22676 NR_145524 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr10-1875 chr10 99346419 99346629 + 15.2 0.000 intron (NM_020348, intron 1 of 10) L2a|LINE|L2 17168 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr10-1911 chr10 130187458 130187668 + 15.2 0.000 Intergenic MER45B|DNA|hAT-Tip100 51154 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr18-690 chr18 8608315 8608525 + 15.2 0.000 Intergenic Intergenic -1025 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr16-905 chr16 31471795 31472005 + 15.2 0.000 promoter-TSS (NM_001164719) promoter-TSS (NM_001164719) -252 NM_001042454 7041 Hs.513530 NM_015927 ENSG00000140682 TGFB1I1 ARA55|HIC-5|HIC5|TSC-5 transforming growth factor beta 1 induced transcript 1 protein-coding chrX-784 chrX 45889593 45889803 + 15.2 0.000 Intergenic MER44B|DNA|TcMar-Tigger -38208 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr19-1497 chr19 42129991 42130201 + 15.2 0.000 intron (NM_001207026, intron 1 of 12) intron (NM_001207026, intron 1 of 12) 2350 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr10-3141 chr10 67771981 67772191 + 15.2 0.000 Intergenic Intergenic 66093 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr11-942 chr11 118928009 118928219 + 15.2 0.000 Intergenic Intergenic 17406 NR_039713 100616376 NR_039713 ENSG00000264211 MIR4492 mir-4492 microRNA 4492 ncRNA chr5-604 chr5 36156750 36156960 + 15.2 0.000 intron (NM_001243120, intron 2 of 7) MER5A|DNA|hAT-Charlie 4744 NM_032637 6502 Hs.23348 NM_005983 ENSG00000145604 SKP2 FBL1|FBXL1|FLB1|p45 S-phase kinase associated protein 2 protein-coding chr1-3864 chr1 41771514 41771724 + 15.2 0.000 intron (NM_024503, intron 1 of 8) LTR78|LTR|ERV1 147303 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr9-2061 chr9 34332303 34332513 + 15.2 0.000 intron (NM_001244390, intron 1 of 2) L2c|LINE|L2 2839 NM_147173 318 Hs.493767 NM_001161 ENSG00000164978 NUDT2 APAH1 nudix hydrolase 2 protein-coding chrX-374 chrX 104335747 104335957 + 15.2 0.000 Intergenic CR1-3_Croc|LINE|CR1 -80919 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr19-2477 chr19 3580098 3580308 + 15.2 0.000 Intergenic L1MB5|LINE|L1 -5275 NM_133261 126326 Hs.266873 NM_133261 ENSG00000179855 GIPC3 C19orf64|DFNB15|DFNB72|DFNB95 GIPC PDZ domain containing family member 3 protein-coding chr15-913 chr15 58987523 58987733 + 15.2 0.000 promoter-TSS (NM_001330331) promoter-TSS (NM_001330331) -35 NM_001270528 54778 Hs.404423 NM_017610 ENSG00000157450 RNF111 ARK|hRNF111 ring finger protein 111 protein-coding chr17-1094 chr17 59331507 59331717 + 15.2 0.000 promoter-TSS (NM_001005404) promoter-TSS (NM_001005404) -43 NM_001005404 388403 Hs.463613 NM_001005404 ENSG00000175155 YPEL2 FKSG4 yippee like 2 protein-coding chr7-1160 chr7 137953689 137953899 + 15.2 0.000 intron (NR_161346, intron 1 of 3) intron (NR_161346, intron 1 of 3) 446 NR_161346 100130880 Hs.712161 NR_161346 CREB3L2-AS1 - CREB3L2 antisense RNA 1 ncRNA chr3-2704 chr3 63762343 63762553 + 15.2 0.000 Intergenic MIR3|SINE|MIR -56851 NM_001355236 132200 Hs.506386 NM_001355236 ENSG00000163632 C3orf49 - chromosome 3 open reading frame 49 protein-coding chr18-285 chr18 54269350 54269560 + 15.2 0.000 promoter-TSS (NM_007195) promoter-TSS (NM_007195) -24 NM_001351610 11201 Hs.438533 NM_007195 ENSG00000101751 POLI RAD30B|RAD3OB|eta2 DNA polymerase iota protein-coding chr22-837 chr22 40726738 40726948 + 15.2 0.000 Intergenic Intergenic 47665 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr12-639 chr12 122752787 122752997 + 15.2 0.000 promoter-TSS (NM_003677) promoter-TSS (NM_003677) 68 NM_003677 8562 Hs.22393 NM_003677 ENSG00000139726 DENR DRP|DRP1|SMAP-3 density regulated re-initiation and release factor protein-coding chrX-187 chrX 134460107 134460317 + 15.2 0.000 promoter-TSS (NM_000194) promoter-TSS (NM_000194) 47 NM_000194 3251 Hs.412707 NM_000194 ENSG00000165704 HPRT1 HGPRT|HPRT hypoxanthine phosphoribosyltransferase 1 protein-coding chr3-1278 chr3 15362564 15362774 + 15.2 0.000 Intergenic Intergenic -21289 NM_001018009 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr1-2816 chr1 27492252 27492462 + 15.2 0.000 Intergenic MIRc|SINE|MIR -2190 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr6-1071 chr6 35262846 35263056 + 15.2 0.000 intron (NM_001292032, intron 1 of 12) intron (NM_001292032, intron 1 of 12) 3216 NM_001292032 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr16-1389 chr16 84231147 84231357 + 15.2 0.000 intron (NM_172347, intron 2 of 2) MIR|SINE|MIR 8498 NM_172347 93107 Hs.335877 NM_133490 ENSG00000168418 KCNG4 KV6.3|KV6.4 potassium voltage-gated channel modifier subfamily G member 4 protein-coding chr20-571 chr20 32829702 32829912 + 15.2 0.000 intron (NM_012325, intron 2 of 6) intron (NM_012325, intron 2 of 6) 9853 NM_012325 22919 Hs.472437 NM_012325 ENSG00000101367 MAPRE1 EB1 microtubule associated protein RP/EB family member 1 protein-coding chr7-1002 chr7 129800717 129800927 + 15.2 0.000 Intergenic Intergenic -25808 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr3-3873 chr3 38623623 38623833 + 15.2 0.000 intron (NM_198056, intron 3 of 27) intron (NM_198056, intron 3 of 27) 25944 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr19-1203 chr19 1575772 1575982 + 15.2 0.000 3' UTR (NM_001281453, exon 7 of 7) 3' UTR (NM_001281453, exon 7 of 7) -7552 NM_001174118 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr3-2957 chr3 64189309 64189519 + 15.2 0.000 intron (NR_046702, intron 1 of 3) intron (NR_046702, intron 1 of 3) 1870 NR_046702 100874243 Hs.670840 NR_046702 ENSG00000226017 PRICKLE2-AS3 - PRICKLE2 antisense RNA 3 ncRNA chr17-4193 chr17 17989513 17989723 + 15.2 0.000 intron (NM_031294, intron 5 of 13) LTR16E1|LTR|ERVL 16756 NM_001130091 83450 Hs.579264 NM_031294 ENSG00000171962 DRC3 CFAP134|LRRC48 dynein regulatory complex subunit 3 protein-coding chr16-2231 chr16 88732588 88732798 + 15.2 0.000 exon (NM_001142864, exon 20 of 51) exon (NM_001142864, exon 20 of 51) 1513 NR_103774 100289580 Hs.437712 NM_207451 LOC100289580 - uncharacterized LOC100289580 ncRNA chr8-1537 chr8 97302375 97302585 + 15.2 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) -24552 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr13-980 chr13 42656405 42656615 + 15.2 0.000 Intergenic Intergenic 82358 NM_003701 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr5-1391 chr5 130706856 130707066 + 15.2 0.000 Intergenic Intergenic 458295 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr17-592 chr17 82065593 82065803 + 15.2 0.000 5' UTR (NM_022156, exon 1 of 14) 5' UTR (NM_022156, exon 1 of 14) 106 NM_022156 64118 Hs.514599 NM_022156 ENSG00000169718 DUS1L DUS1|PP3111 dihydrouridine synthase 1 like protein-coding chr13-904 chr13 47039217 47039427 + 15.2 0.000 Intergenic Tigger18a|DNA|TcMar-Tigger -142246 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr1-1569 chr1 17569624 17569834 + 15.2 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) -10824 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr1-1293 chr1 1407302 1407512 + 15.2 0.000 promoter-TSS (NM_001318485) promoter-TSS (NM_001318485) -114 NM_001318485 55052 Hs.182698 NM_017971 ENSG00000242485 MRPL20 L20mt|MRP-L20 mitochondrial ribosomal protein L20 protein-coding chr5-1360 chr5 38809797 38810007 + 15.2 0.000 intron (NR_109951, intron 1 of 3) intron (NR_109951, intron 1 of 3) 35927 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA chr2-2486 chr2 138085473 138085683 + 15.2 0.000 Intergenic L1PA11|LINE|L1 -16306 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr19-1624 chr19 49360038 49360248 + 15.2 0.000 intron (NM_003598, intron 1 of 11) MSR1|Satellite|Satellite 1374 NM_001256661 8463 Hs.515534 NM_003598 ENSG00000074219 TEAD2 ETF|TEAD-2|TEF-4|TEF4 TEA domain transcription factor 2 protein-coding chr8-833 chr8 98213419 98213629 + 15.2 0.000 intron (NR_135745, intron 6 of 11) L2a|LINE|L2 80711 NM_024759 79815 Hs.309489 NM_024759 ENSG00000104361 NIPAL2 NPAL2 NIPA like domain containing 2 protein-coding chr11-2001 chr11 46475403 46475613 + 15.2 0.000 intron (NM_001267782, intron 13 of 19) intron (NM_001267782, intron 13 of 19) -23619 NR_036117 100422827 NR_036117 ENSG00000265014 MIR3160-1 mir-3160-1 microRNA 3160-1 ncRNA chr10-846 chr10 29947304 29947514 + 15.2 0.000 Intergenic Intergenic 112177 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr7-1182 chr7 40301783 40301993 + 15.2 0.000 intron (NM_024728, intron 8 of 14) intron (NM_024728, intron 8 of 14) 166912 NM_001193312 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding chr9-1614 chr9 127162128 127162338 + 15.2 0.000 intron (NM_001190729, intron 8 of 17) L2b|LINE|L2 -39598 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr4-3771 chr4 94030207 94030417 + 15.2 0.000 Intergenic L1PA3|LINE|L1 177244 NR_125922 101929210 Hs.518877 NR_125922 ENSG00000246541 LOC101929210 - uncharacterized LOC101929210 ncRNA chr1-4022 chr1 183146938 183147148 + 15.2 0.000 Intergenic Intergenic -5773 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr15-560 chr15 67125641 67125851 + 15.2 0.000 promoter-TSS (NM_001145102) promoter-TSS (NM_001145102) 30 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr2-2428 chr2 39875209 39875419 + 15.2 0.000 Intergenic Intergenic -42320 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr22-938 chr22 45861507 45861717 + 15.2 0.000 Intergenic L2b|LINE|L2 101088 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr1-2353 chr1 32818375 32818585 + 15.2 0.000 promoter-TSS (NM_003680) promoter-TSS (NM_003680) -448 NM_003680 8565 Hs.213264 NM_003680 ENSG00000134684 YARS CMTDIC|TYRRS|YRS|YTS tyrosyl-tRNA synthetase protein-coding chr12-1682 chr12 105882448 105882658 + 15.2 0.000 Intergenic OldhAT1|DNA|hAT-Ac 175779 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr9-1367 chr9 2494662 2494872 + 15.2 0.000 Intergenic Intergenic -127020 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr6-405 chr6 149031960 149032170 + 15.2 0.000 intron (NR_134599, intron 1 of 1) intron (NR_134599, intron 1 of 1) 596 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr7-1767 chr7 55572673 55572883 + 15.2 0.000 promoter-TSS (NM_001321243) promoter-TSS (NM_001321243) -276 NM_001321243 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr2-2221 chr2 144115811 144116021 + 15.2 0.000 intron (NM_001354355, intron 7 of 13) intron (NM_001354355, intron 7 of 13) 95663 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr1-5366 chr1 242006266 242006476 + 15.2 0.000 Intergenic Intergenic -7273 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr6-1285 chr6 113048781 113048991 + 15.2 0.000 Intergenic L2c|LINE|L2 384561 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr16-1502 chr16 14362932 14363142 + 15.2 0.000 TTS (NR_131191) TTS (NR_131191) 7229 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr7-1036 chr7 82430562 82430772 + 15.2 0.000 intron (NM_000722, intron 1 of 38) intron (NM_000722, intron 1 of 38) 13110 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr2-1409 chr2 108612239 108612449 + 15.2 0.000 intron (NM_001193482, intron 1 of 9) intron (NM_001193482, intron 1 of 9) 5197 NM_001193482 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr10-885 chr10 88880444 88880654 + 15.2 0.000 5' UTR (NM_020799, exon 1 of 11) 5' UTR (NM_020799, exon 1 of 11) 304 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr1-3213 chr1 171595486 171595696 + 15.2 0.000 Intergenic Intergenic -24172 NM_001368164 110806290 NM_001368164 MYOCOS - myocilin opposite strand protein-coding chr9-867 chr9 76107224 76107434 + 15.2 0.000 exon (NM_001190482, exon 9 of 37) exon (NM_001190482, exon 9 of 37) 216656 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr13-237 chr13 40789419 40789629 + 15.2 0.000 promoter-TSS (NM_014252) promoter-TSS (NM_014252) -87 NM_014252 10166 Hs.646645 NM_014252 ENSG00000102743 SLC25A15 D13S327|HHH|ORC1|ORNT1 solute carrier family 25 member 15 protein-coding chr16-1878 chr16 84351553 84351763 + 15.2 0.000 Intergenic Intergenic -16865 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr2-2054 chr2 175181623 175181833 + 15.2 0.000 promoter-TSS (NM_001689) promoter-TSS (NM_001689) -18 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr15-355 chr15 51971826 51972036 + 15.2 0.000 promoter-TSS (NM_138792) promoter-TSS (NM_138792) -130 NM_001323903 123169 Hs.567662 NM_138792 ENSG00000166477 LEO1 RDL LEO1 homolog, Paf1/RNA polymerase II complex component protein-coding chr3-959 chr3 52052951 52053161 + 15.2 0.000 intron (NM_001947, intron 2 of 2) intron (NM_001947, intron 2 of 2) 3515 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr14-1437 chr14 76500364 76500574 + 15.2 0.000 intron (NM_004452, intron 10 of 10) intron (NM_004452, intron 10 of 10) 129122 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr4-1486 chr4 18882523 18882733 + 15.2 0.000 Intergenic L2c|LINE|L2 -860753 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr8-912 chr8 124629760 124629970 + 15.2 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 90742 NM_005005 4715 Hs.15977 NM_005005 ENSG00000147684 NDUFB9 B22|CI-B22|LYRM3|MC1DN24|UQOR22 NADH:ubiquinone oxidoreductase subunit B9 protein-coding chr6-1128 chr6 145756273 145756483 + 15.2 0.000 intron (NR_038246, intron 1 of 2) ERVL-E-int|LTR|ERVL -20355 NM_001360064 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr15-482 chr15 100663165 100663375 + 15.2 0.000 Intergenic Intergenic 60681 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 - ankyrin repeat and SOCS box containing 7 protein-coding chr16-1846 chr16 67115738 67115948 + 15.2 0.000 intron (NM_001320542, intron 2 of 16) intron (NM_001320542, intron 2 of 16) 5902 NM_025187 80262 Hs.513666 NM_025187 ENSG00000125149 C16orf70 C16orf6|LIN10|lin-10 chromosome 16 open reading frame 70 protein-coding chr16-2311 chr16 20910836 20911046 + 15.2 0.000 intron (NM_001369642, intron 3 of 6) intron (NM_001369642, intron 3 of 6) 9679 NM_001369645 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr1-2980 chr1 170700697 170700907 + 15.2 0.000 intron (NM_022716, intron 1 of 3) intron (NM_022716, intron 1 of 3) 36671 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr6-1073 chr6 37048825 37049035 + 15.2 0.000 Intergenic Intergenic 43275 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chrX-519 chrX 15448014 15448224 + 15.2 0.000 intron (NM_001018109, intron 5 of 9) intron (NM_001018109, intron 5 of 9) 43190 NR_037859 100532742 Hs.495728 NR_037859 PIR-FIGF - PIR-FIGF readthrough ncRNA chr1-2579 chr1 36136497 36136707 + 15.2 0.000 TTS (NR_073097) TTS (NR_073097) -11380 NM_001294347 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr5-1253 chr5 31365275 31365485 + 15.2 0.000 Intergenic L5|LINE|RTE-X 166713 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr1-4116 chr1 244921878 244922088 + 15.2 0.000 Intergenic FLAM_C|SINE|Alu -47886 NM_032328 84288 Hs.134857 NM_032328 ENSG00000203666 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding chr17-2113 chr17 7782177 7782387 + 15.2 0.000 intron (NM_020877, intron 39 of 85) L1MEd|LINE|L1 27962 NR_002778 118432 Hs.658086 NR_002778 ENSG00000240480 RPL29P2 RPL29_10_1510 ribosomal protein L29 pseudogene 2 pseudo chr13-724 chr13 80040747 80040957 + 15.2 0.000 Intergenic Intergenic 29775 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr8-1137 chr8 131973728 131973938 + 15.2 0.000 intron (NR_136616, intron 10 of 23) intron (NR_136616, intron 10 of 23) 57060 NM_001323556 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr10-2079 chr10 110326480 110326690 + 15.2 0.000 Intergenic L2a|LINE|L2 -21665 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr7-879 chr7 127392678 127392888 + 15.2 0.000 promoter-TSS (NM_176814) promoter-TSS (NM_176814) -75 NM_176814 168850 Hs.159006 NM_176814 ENSG00000048405 ZNF800 - zinc finger protein 800 protein-coding chr2-2930 chr2 3787244 3787454 + 15.2 0.000 intron (NM_001287444, intron 10 of 10) MIRb|SINE|MIR 80507 NM_001365580 728597 Hs.304233 NM_001287444 ENSG00000214866 DCDC2C - doublecortin domain containing 2C protein-coding chr7-1000 chr7 111562496 111562706 + 15.2 0.000 promoter-TSS (NM_001350960) promoter-TSS (NM_001350960) -84 NM_001244606 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr11-1461 chr11 83051846 83052056 + 15.2 0.000 intron (NM_014488, intron 1 of 5) intron (NM_014488, intron 1 of 5) -10353 NR_033347 100379250 Hs.725115 NR_033347 ENSG00000207221 SNORA70E U70E small nucleolar RNA, H/ACA box 70E snoRNA chr9-1795 chr9 19424278 19424488 + 15.2 0.000 intron (NM_001010887, intron 2 of 5) intron (NM_001010887, intron 2 of 5) 15374 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr6-1488 chr6 69835923 69836133 + 15.2 0.000 Intergenic Intergenic -30528 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr19-3449 chr19 29496072 29496282 + 15.2 0.000 intron (NR_040029, intron 1 of 9) intron (NR_040029, intron 1 of 9) 29575 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr7-1949 chr7 77410223 77410433 + 15.2 0.000 intron (NR_146937, intron 1 of 31) intron (NR_146937, intron 1 of 31) -4870 NR_110073 101927243 Hs.547753 NR_110073 LOC101927243 - uncharacterized LOC101927243 ncRNA chr6-994 chr6 4942234 4942444 + 15.2 0.000 intron (NM_001143971, intron 4 of 6) intron (NM_001143971, intron 4 of 6) 52299 NM_001143971 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr11-985 chr11 76721882 76722092 + 15.2 0.000 promoter-TSS (NR_024042) promoter-TSS (NR_024042) -198 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr7-1472 chr7 105487950 105488160 + 15.2 0.000 intron (NM_001318164, intron 7 of 15) intron (NM_001318164, intron 7 of 15) 20465 NM_001318163 54517 Hs.520619 NM_019042 ENSG00000091127 PUS7 IDDABS pseudouridine synthase 7 protein-coding chr2-1910 chr2 169815918 169816128 + 15.2 0.000 promoter-TSS (NR_145754) promoter-TSS (NR_145754) -256 NR_145754 109617017 NR_145754 SNORD3K - small nucleolar RNA, C/D box 3K snoRNA chr16-2041 chr16 54306672 54306882 + 15.2 0.000 Intergenic Intergenic -19990 NM_024336 79191 Hs.499205 NM_024336 ENSG00000177508 IRX3 IRX-1|IRXB1 iroquois homeobox 3 protein-coding chr16-1533 chr16 64478548 64478758 + 15.2 0.000 Intergenic Intergenic 643410 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr4-2802 chr4 30763370 30763580 + 15.2 0.000 intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 43106 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr13-1895 chr13 45659045 45659255 + 15.2 0.000 Intergenic Intergenic 42034 NR_125786 103752581 NR_125786 LINC01055 - long intergenic non-protein coding RNA 1055 ncRNA chr1-3492 chr1 92184884 92185094 + 15.2 0.000 TTS (NM_015237) TTS (NM_015237) 16065 NM_015237 23285 Hs.21554 NM_015237 ENSG00000189195 KIAA1107 - KIAA1107 protein-coding chr2-4753 chr2 12052086 12052296 + 15.2 0.000 intron (NR_110196, intron 2 of 5) MIRc|SINE|MIR 45075 NR_110196 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr17-2597 chr17 78489101 78489311 + 15.2 0.000 intron (NM_173628, intron 44 of 80) intron (NM_173628, intron 44 of 80) 4296 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr5-1127 chr5 71882947 71883157 + 15.2 0.000 Intergenic Intergenic 163777 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr5-1780 chr5 36301911 36302121 + 15.2 0.000 promoter-TSS (NM_001161429) promoter-TSS (NM_001161429) -114 NM_001323273 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr1-4084 chr1 223742007 223742217 + 15.2 0.000 intron (NM_001146068, intron 2 of 20) intron (NM_001146068, intron 2 of 20) 29573 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr6-1146 chr6 159833673 159833883 + 15.2 0.000 Intergenic L4_B_Mam|LINE|RTE-X 33502 NM_001271862 154197 Hs.349077 NM_173516 ENSG00000146453 PNLDC1 HsPNLDC1 PARN like, ribonuclease domain containing 1 protein-coding chr10-1215 chr10 24456547 24456757 + 15.2 0.000 intron (NM_001321681, intron 1 of 13) MIR1_Amn|SINE|MIR 7238 NM_001321681 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr17-2340 chr17 60354259 60354469 + 15.2 0.000 intron (NM_032582, intron 1 of 33) intron (NM_032582, intron 1 of 33) 37769 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chrX-419 chrX 16022756 16022966 + 15.2 0.000 Intergenic L3|LINE|CR1 -100704 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr10-1326 chr10 91349354 91349564 + 15.2 0.000 intron (NR_024467, intron 4 of 4) intron (NR_024467, intron 4 of 4) -59776 NM_001348365 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr9-2811 chr9 123478924 123479134 + 15.2 0.000 intron (NM_001352968, intron 12 of 18) L2a|LINE|L2 6593 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr7-1141 chr7 68699153 68699363 + 15.2 0.000 Intergenic MER81|DNA|hAT-Blackjack 679005 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr6-1788 chr6 109790310 109790520 + 15.2 0.000 intron (NM_014845, intron 19 of 22) intron (NM_014845, intron 19 of 22) 99194 NM_014845 9896 Hs.529959 NM_014845 ENSG00000112367 FIG4 ALS11|BTOP|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding chr16-759 chr16 66130589 66130799 + 15.2 0.000 Intergenic Intergenic -235997 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr18-517 chr18 49723636 49723846 + 15.2 0.000 Intergenic Intergenic 89792 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr10-1872 chr10 96673819 96674029 + 15.2 0.000 intron (NM_152309, intron 2 of 16) intron (NM_152309, intron 2 of 16) 46590 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr22-687 chr22 42994067 42994277 + 15.2 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 20977 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr3-1947 chr3 8371115 8371325 + 15.2 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 130438 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr5-1292 chr5 1608387 1608597 + 15.2 0.000 intron (NR_003713, intron 2 of 3) intron (NR_003713, intron 2 of 3) -13961 NR_003263 728609 Hs.379186 NR_003263 SDHAP3 SDHACL|SDHAL succinate dehydrogenase complex flavoprotein subunit A pseudogene 3 pseudo chr1-4015 chr1 174800455 174800665 + 15.2 0.000 intron (NM_001366454, intron 1 of 8) intron (NM_001366454, intron 1 of 8) 822 NM_001330989 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr1-1807 chr1 183291858 183292068 + 15.2 0.000 intron (NM_170706, intron 3 of 10) intron (NM_170706, intron 3 of 10) 12911 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr6-1038 chr6 157656639 157656849 + 15.2 0.000 intron (NM_153746, intron 8 of 8) intron (NM_153746, intron 8 of 8) 127612 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr19-3123 chr19 16419894 16420104 + 15.2 0.000 intron (NM_021235, intron 10 of 22) intron (NM_021235, intron 10 of 22) 51971 NM_001258374 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr1-4369 chr1 151619714 151619924 + 15.2 0.000 intron (NM_030918, intron 1 of 11) intron (NM_030918, intron 1 of 11) 7769 NM_030918 81609 Hs.192326 NM_030918 ENSG00000143376 SNX27 MRT1|MY014 sorting nexin 27 protein-coding chr5-1770 chr5 16916527 16916737 + 15.2 0.000 intron (NM_012334, intron 1 of 40) intron (NM_012334, intron 1 of 40) 19656 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr17-1386 chr17 4249540 4249750 + 15.2 0.000 intron (NR_047571, intron 1 of 23) intron (NR_047571, intron 1 of 23) 14202 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chr9-1667 chr9 35350418 35350628 + 15.2 0.000 intron (NM_001371188, intron 1 of 29) intron (NM_001371188, intron 1 of 29) 8627 NM_001371188 chr11-2976 chr11 87862688 87862898 + 15.2 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -143382 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr1-2626 chr1 110055571 110055781 + 15.2 0.000 Intergenic Intergenic 14996 NM_006492 257 Hs.669953 NM_006492 ENSG00000156150 ALX3 FND|FND1 ALX homeobox 3 protein-coding chr19-1139 chr19 18174022 18174232 + 15.2 0.000 intron (NM_006332, intron 1 of 6) CpG 314 NM_006332 10437 Hs.14623 NM_006332 ENSG00000216490 IFI30 GILT|IFI-30|IP-30|IP30 IFI30 lysosomal thiol reductase protein-coding chr20-275 chr20 17531279 17531489 + 15.2 0.000 promoter-TSS (NM_001195) promoter-TSS (NM_001195) -5 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr12-1122 chr12 53097188 53097398 + 15.2 0.000 promoter-TSS (NM_002178) promoter-TSS (NM_002178) -374 NM_002178 3489 Hs.274313 NM_002178 ENSG00000167779 IGFBP6 IBP6 insulin like growth factor binding protein 6 protein-coding chr6-1787 chr6 109660960 109661170 + 15.2 0.000 intron (NR_138057, intron 6 of 11) Charlie4z|DNA|hAT-Charlie 30147 NM_001329603 221264 Hs.205144 NM_145025 ENSG00000155085 AK9 AK 9|AKD1|AKD2|C6orf199|C6orf224|dJ70A9.1 adenylate kinase 9 protein-coding chr8-1200 chr8 66546910 66547120 + 15.2 0.000 Intergenic Intergenic 53449 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 VXN C8orf46 vexin protein-coding chr2-1313 chr2 45938763 45938973 + 15.2 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 287193 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr12-732 chr12 108630656 108630866 + 15.2 0.000 intron (NM_003006, intron 1 of 1) L2b|LINE|L2 1320 NM_001206609 6404 Hs.591014 NM_003006 ENSG00000110876 SELPLG CD162|CLA|PSGL-1|PSGL1 selectin P ligand protein-coding chr11-1301 chr11 46369460 46369670 + 15.2 0.000 intron (NM_001199268, intron 5 of 29) intron (NM_001199268, intron 5 of 29) -6837 NR_039837 100616368 NR_039837 ENSG00000264102 MIR4688 mir-4688 microRNA 4688 ncRNA chr6-1303 chr6 1622379 1622589 + 15.2 0.000 Intergenic Intergenic 12569 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr12-2253 chr12 87216542 87216752 + 15.2 0.000 Intergenic Intergenic -114092 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr18-485 chr18 7608402 7608612 + 15.2 0.000 intron (NM_002845, intron 1 of 30) intron (NM_002845, intron 1 of 30) 41191 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr4-1528 chr4 130043754 130043964 + 15.2 0.000 Intergenic HAL1|LINE|L1 272240 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr5-846 chr5 73655603 73655813 + 15.2 0.000 intron (NM_001177693, intron 1 of 35) MIRc|SINE|MIR 29550 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr18-152 chr18 21315734 21315944 + 15.2 0.000 intron (NM_001142966, intron 1 of 32) MER115|DNA|hAT-Tip100 73597 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr22-775 chr22 40534967 40535177 + 15.2 0.000 intron (NM_020831, intron 3 of 14) intron (NM_020831, intron 3 of 14) -1245 NM_001318139 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr18-411 chr18 40485367 40485577 + 15.2 0.000 Intergenic Intergenic 419186 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr2-1947 chr2 223041564 223041774 + 15.2 0.000 Intergenic Intergenic -10261 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr17-3225 chr17 9223554 9223764 + 15.2 0.000 intron (NM_004822, intron 6 of 6) intron (NM_004822, intron 6 of 6) -44541 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr15-854 chr15 75700746 75700956 + 15.2 0.000 intron (NM_001897, intron 1 of 9) intron (NM_001897, intron 1 of 9) 11997 NM_001897 1464 Hs.513044 NM_001897 ENSG00000173546 CSPG4 HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2 chondroitin sulfate proteoglycan 4 protein-coding chr6-2039 chr6 71250240 71250450 + 15.2 0.000 Intergenic Intergenic -38466 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr4-844 chr4 25160336 25160546 + 15.2 0.000 promoter-TSS (NM_016955) promoter-TSS (NM_016955) 8 NM_016955 51091 Hs.253305 NM_016955 ENSG00000109618 SEPSECS LP|PCH2D|SLA|SLA/LP Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase protein-coding chr22-1053 chr22 45983477 45983687 + 15.2 0.000 Intergenic Intergenic -6420 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr10-3377 chr10 24132803 24133013 + 15.2 0.000 intron (NM_001098500, intron 2 of 18) LTR78|LTR|ERV1 -75883 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr17-1651 chr17 47279236 47279446 + 15.2 0.000 intron (NM_000212, intron 2 of 14) intron (NM_000212, intron 2 of 14) 25499 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chr1-2424 chr1 3122079 3122289 + 15.2 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) -5791 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr5-2083 chr5 176691233 176691443 + 15.2 0.000 Intergenic Intergenic 43854 NM_001366492 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr8-1375 chr8 143505589 143505799 + 15.2 0.000 TTS (NR_145785) TTS (NR_145785) 554 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr19-2780 chr19 45630535 45630745 + 15.2 0.000 intron (NR_147901, intron 9 of 20) ORSL-2b|DNA|hAT-Tip100 8447 NR_029886 442902 NR_029886 ENSG00000284544 MIR330 MIRN330|hsa-mir-330|mir-330 microRNA 330 ncRNA chr6-2419 chr6 156925849 156926059 + 15.1 0.000 intron (NM_020732, intron 4 of 19) intron (NM_020732, intron 4 of 19) -110473 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr12-574 chr12 75954172 75954382 + 15.1 0.000 Intergenic Intergenic 77499 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr1-1336 chr1 267910 268120 + 15.1 0.000 Intergenic Intergenic -61418 NR_026823 677784 Hs.722487 NR_026823 ENSG00000249054 FAM138D F379 family with sequence similarity 138 member D ncRNA chr7-2420 chr7 92557261 92557471 + 15.1 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 28571 NM_001363366 84060 Hs.21590 NM_032120 ENSG00000127993 RBM48 C7orf64|HSPC304 RNA binding motif protein 48 protein-coding chr1-2503 chr1 197838928 197839138 + 15.1 0.000 Intergenic Intergenic -63553 NM_144977 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr7-2909 chr7 132200700 132200910 + 15.1 0.000 intron (NM_020911, intron 12 of 31) intron (NM_020911, intron 12 of 31) -60056 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr14-1027 chr14 55584032 55584242 + 15.1 0.000 intron (NM_004986, intron 1 of 41) L2a|LINE|L2 3930 NM_001079521 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding chr3-1106 chr3 53072640 53072850 + 15.1 0.000 Intergenic Intergenic -26672 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr2-2348 chr2 201183095 201183305 + 15.1 0.000 promoter-TSS (NM_001206542) promoter-TSS (NM_001206542) 59 NM_001230 843 Hs.5353 NM_001230 ENSG00000003400 CASP10 ALPS2|FLICE2|MCH4 caspase 10 protein-coding chr2-2246 chr2 226935581 226935791 + 15.1 0.000 intron (NM_001349069, intron 8 of 8) MIR3|SINE|MIR 99632 NM_032276 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding chr7-419 chr7 35037483 35037693 + 15.1 0.000 promoter-TSS (NM_001366673) promoter-TSS (NM_001366673) -103 NM_001366673 23333 Hs.408623 NM_015283 ENSG00000173852 DPY19L1 - dpy-19 like C-mannosyltransferase 1 protein-coding chr16-2266 chr16 2094533 2094743 + 15.1 0.000 intron (NM_000296, intron 34 of 45) intron (NM_000296, intron 34 of 45) 3202 NR_135175 105371049 Hs.710709 NR_135175 ENSG00000259933 LOC105371049 - uncharacterized LOC105371049 ncRNA chr13-1134 chr13 28373706 28373916 + 15.1 0.000 intron (NM_001160030, intron 14 of 14) intron (NM_001160030, intron 14 of 14) 121317 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr18-505 chr18 28281410 28281620 + 15.1 0.000 Intergenic L1PA15-16|LINE|L1 -104385 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-2509 chr2 167140763 167140973 + 15.1 0.000 promoter-TSS (NR_046665) promoter-TSS (NR_046665) 87 NR_046665 100874011 NR_046665 XIRP2-AS1 - XIRP2 antisense RNA 1 ncRNA chr20-1922 chr20 7399991 7400201 + 15.1 0.000 Intergenic Intergenic 28488 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chr9-2691 chr9 78707741 78707951 + 15.1 0.000 Intergenic Intergenic 410721 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr7-1034 chr7 66051017 66051227 + 15.1 0.000 Intergenic MIR|SINE|MIR -24697 NM_001024944 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr4-2185 chr4 112706158 112706368 + 15.1 0.000 intron (NM_001354269, intron 1 of 43) CpG 245 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr3-2784 chr3 194347175 194347385 + 15.1 0.000 intron (NM_001080513, intron 1 of 1) intron (NM_001080513, intron 1 of 1) 4048 NM_001291988 1370 Hs.528368 NM_001309 ENSG00000178772 CPN2 ACBP carboxypeptidase N subunit 2 protein-coding chr21-395 chr21 35565199 35565409 + 15.1 0.000 intron (NR_073512, intron 1 of 2) MER74A|LTR|ERVL 15460 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr17-2985 chr17 68388293 68388503 + 15.1 0.000 intron (NM_001352899, intron 9 of 12) MER20|DNA|hAT-Charlie -25225 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr11-1562 chr11 69121949 69122159 + 15.1 0.000 Intergenic Intergenic -33881 NM_001369201 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chr3-2480 chr3 130576561 130576771 + 15.1 0.000 intron (NM_001102608, intron 7 of 35) intron (NM_001102608, intron 7 of 35) 16332 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr6-789 chr6 134288617 134288827 + 15.1 0.000 intron (NM_001143676, intron 1 of 13) intron (NM_001143676, intron 1 of 13) 29336 NM_001143676 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr14-2394 chr14 52927131 52927341 + 15.1 0.000 intron (NM_006832, intron 2 of 14) intron (NM_006832, intron 2 of 14) 23814 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr1-2694 chr1 208090254 208090464 + 15.1 0.000 intron (NM_025179, intron 9 of 31) intron (NM_025179, intron 9 of 31) 154025 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr5-1511 chr5 139746328 139746538 + 15.1 0.000 promoter-TSS (NR_105052) promoter-TSS (NR_105052) -210 NR_105052 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr11-1186 chr11 72038414 72038624 + 15.1 0.000 intron (NR_104476, intron 2 of 24) intron (NR_104476, intron 2 of 24) 24228 NR_104178 100128494 Hs.713607 NR_104178 ENSG00000251143 LOC100128494 - uncharacterized LOC100128494 ncRNA chr18-295 chr18 24397894 24398104 + 15.1 0.000 promoter-TSS (NM_080597) promoter-TSS (NM_080597) -175 NM_080597 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr7-1309 chr7 98284281 98284491 + 15.1 0.000 intron (NM_001159491, intron 2 of 2) intron (NM_001159491, intron 2 of 2) 2700 NM_001159491 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr1-4368 chr1 150808105 150808315 + 15.1 0.000 promoter-TSS (NM_000396) promoter-TSS (NM_000396) 50 NM_000396 1513 Hs.632466 NM_000396 ENSG00000143387 CTSK CTS02|CTSO|CTSO1|CTSO2|PKND|PYCD cathepsin K protein-coding chr1-2802 chr1 6205235 6205445 + 15.1 0.000 promoter-TSS (NM_207396) promoter-TSS (NM_207396) 440 NR_125997 102724450 Hs.669107 NR_125997 ENSG00000226944 LOC102724450 - uncharacterized LOC102724450 ncRNA chr5-2426 chr5 118779009 118779219 + 15.1 0.000 Intergenic LOR1-int|LTR|ERV1 182926 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chr9-800 chr9 69412739 69412949 + 15.1 0.000 Intergenic Intergenic 83519 NM_004816 9413 Hs.118003 NM_004816 ENSG00000135063 FAM189A2 C9orf61|X123 family with sequence similarity 189 member A2 protein-coding chr9-1200 chr9 116288843 116289053 + 15.1 0.000 intron (NM_002581, intron 9 of 21) intron (NM_002581, intron 9 of 21) 111658 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr2-3124 chr2 168490150 168490360 + 15.1 0.000 intron (NM_001256126, intron 1 of 10) L1MC2|LINE|L1 33983 NM_001256126 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr20-899 chr20 44494286 44494496 + 15.1 0.000 3' UTR (NM_024331, exon 6 of 6) 3' UTR (NM_024331, exon 6 of 6) 18517 NM_001261839 79183 Hs.283869 NM_024331 ENSG00000124120 TTPAL C20orf121 alpha tocopherol transfer protein like protein-coding chr12-1391 chr12 104792591 104792801 + 15.1 0.000 Intergenic Intergenic 165594 NM_001352172 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr10-1286 chr10 31146544 31146754 + 15.1 0.000 Intergenic Intergenic -41234 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr10-1085 chr10 31419834 31420044 + 15.1 0.000 intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) -20184 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr17-1210 chr17 81898611 81898821 + 15.1 0.000 intron (NM_001289418, intron 2 of 2) intron (NM_001289418, intron 2 of 2) -3522 NM_148896 256933 Hs.569843 NM_148896 ENSG00000183979 NPB L7|PPL7|PPNPB neuropeptide B protein-coding chr8-1717 chr8 130134996 130135206 + 15.1 0.000 intron (NM_001362925, intron 15 of 29) intron (NM_001362925, intron 15 of 29) -50333 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr12-1609 chr12 57898881 57899091 + 15.1 0.000 Intergenic Intergenic -2504 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr17-498 chr17 64837093 64837303 + 15.1 0.000 promoter-TSS (NR_024386) promoter-TSS (NR_024386) -14 NR_024386 440456 Hs.646585 NR_024386 PLEKHM1P1 PLEKHM1P pleckstrin homology and RUN domain containing M1 pseudogene 1 pseudo chr7-1745 chr7 32611748 32611958 + 15.1 0.000 intron (NR_036680, intron 12 of 16) intron (NR_036680, intron 12 of 16) 107315 NR_036680 100129460 Hs.633705 NR_036680 DPY19L1P1 - DPY19L1 pseudogene 1 pseudo chr18-277 chr18 80183357 80183567 + 15.1 0.000 intron (NM_032510, intron 2 of 2) intron (NM_032510, intron 2 of 2) 35538 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr2-2568 chr2 223837493 223837703 + 15.1 0.000 promoter-TSS (NR_110906) promoter-TSS (NR_110906) -16 NR_110906 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr16-1830 chr16 56849920 56850130 + 15.1 0.000 3' UTR (NM_001242795, exon 20 of 20) 3' UTR (NM_001242795, exon 20 of 20) -8493 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr1-3070 chr1 19232497 19232707 + 15.1 0.000 intron (NM_001271428, intron 15 of 22) intron (NM_001271428, intron 15 of 22) 18922 NM_001271427 23065 Hs.439200 NM_015047 ENSG00000127463 EMC1 CAVIPMR|KIAA0090 ER membrane protein complex subunit 1 protein-coding chr3-1515 chr3 149224865 149225075 + 15.1 0.000 Intergenic Intergenic -3141 NR_046371 1356 Hs.558314 NM_000096 ENSG00000047457 CP CP-2 ceruloplasmin protein-coding chr19-2399 chr19 13089296 13089506 + 15.1 0.000 intron (NM_001365984, intron 8 of 9) intron (NM_001365984, intron 8 of 9) 13457 NM_005583 4066 Hs.46446 NM_005583 ENSG00000104903 LYL1 bHLHa18 LYL1 basic helix-loop-helix family member protein-coding chr17-1159 chr17 17784933 17785143 + 15.1 0.000 intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) -5509 NR_024007 140771 Hs.352643 NM_144774 ENSG00000226746 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 ncRNA chr9-1214 chr9 125843637 125843847 + 15.1 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 95559 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr9-1894 chr9 123081903 123082113 + 15.1 0.000 intron (NM_012197, intron 19 of 25) intron (NM_012197, intron 19 of 25) 29635 NR_030331 693185 NR_030331 ENSG00000283941 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA chr1-1849 chr1 24848124 24848334 + 15.1 0.000 Intergenic CpG 71187 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr17-3768 chr17 33302458 33302668 + 15.1 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -9575 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr1-1942 chr1 27235593 27235803 + 15.1 0.000 intron (NM_001276252, intron 1 of 15) intron (NM_001276252, intron 1 of 15) 1066 NM_001276252 23038 Hs.469154 NM_015023 ENSG00000142784 WDTC1 ADP|DCAF9 WD and tetratricopeptide repeats 1 protein-coding chr5-2315 chr5 58240489 58240699 + 15.1 0.000 Intergenic Intergenic -118253 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr6-1257 chr6 35015768 35015978 + 15.1 0.000 intron (NM_015245, intron 10 of 23) intron (NM_015245, intron 10 of 23) 125466 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr7-1175 chr7 17770002 17770212 + 15.1 0.000 Intergenic MIRb|SINE|MIR 170387 NR_146933 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding chr6-802 chr6 33788283 33788493 + 15.1 0.000 exon (NM_181336, exon 1 of 9) exon (NM_181336, exon 1 of 9) 742 NM_001348710 221496 Hs.444845 NM_181336 ENSG00000161904 LEMD2 CTRCT42|LEM2|NET25|dJ482C21.1 LEM domain containing 2 protein-coding chr7-2059 chr7 130865513 130865723 + 15.1 0.000 Intergenic Intergenic 11192 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr16-1856 chr16 75219865 75220075 + 15.1 0.000 intron (NM_001329190, intron 1 of 5) intron (NM_001329190, intron 1 of 5) 982 NM_001906 1504 Hs.610926 NM_001906 ENSG00000168925 CTRB1 CTRB chymotrypsinogen B1 protein-coding chr21-345 chr21 38289825 38290035 + 15.1 0.000 intron (NM_170737, intron 1 of 2) intron (NM_170737, intron 1 of 2) 17510 NM_170737 3772 Hs.411299 NM_002243 ENSG00000157551 KCNJ15 IRKK|KIR1.3|KIR4.2 potassium voltage-gated channel subfamily J member 15 protein-coding chr6-762 chr6 141421419 141421629 + 15.1 0.000 Intergenic L1PA4|LINE|L1 667275 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr15-589 chr15 75648368 75648578 + 15.1 0.000 promoter-TSS (NM_001318146) promoter-TSS (NM_001318146) -534 NM_153271 257364 Hs.8705 NM_153271 ENSG00000173548 SNX33 SH3PX3|SH3PXD3C|SNX30 sorting nexin 33 protein-coding chr14-1570 chr14 73817311 73817521 + 15.1 0.000 Intergenic AluJr|SINE|Alu 12719 NR_135238 100506498 Hs.569330 NR_135238 ENSG00000258586 LINC02274 - long intergenic non-protein coding RNA 2274 ncRNA chr18-858 chr18 31388453 31388663 + 15.1 0.000 intron (NM_001134453, intron 4 of 14) intron (NM_001134453, intron 4 of 14) 11781 NM_001134453 147409 Hs.407618 NM_177986 ENSG00000175065 DSG4 CDGF13|CDHF13|HYPT6|LAH desmoglein 4 protein-coding chr16-1086 chr16 67727321 67727531 + 15.1 0.000 exon (NM_001320239, exon 12 of 13) exon (NM_001320239, exon 12 of 13) -8110 NM_001243650 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr3-3762 chr3 8840594 8840804 + 15.1 0.000 Intergenic MER119|DNA|hAT-Charlie -71085 NM_001354653 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr14-479 chr14 53999193 53999403 + 15.1 0.000 Intergenic Intergenic -42407 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr16-1680 chr16 88088367 88088577 + 15.1 0.000 Intergenic Intergenic 12513 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr2-2305 chr2 85637525 85637735 + 15.1 0.000 intron (NR_046347, intron 8 of 12) intron (NR_046347, intron 8 of 12) 21444 NM_001256725 10713 Hs.654745 NM_006590 ENSG00000168883 USP39 65K|CGI-21|HSPC332|SAD1|SNRNP65 ubiquitin specific peptidase 39 protein-coding chr9-1711 chr9 106878981 106879191 + 15.1 0.000 intron (NM_001347997, intron 1 of 12) intron (NM_001347997, intron 1 of 12) 15920 NM_001347997 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chrX-460 chrX 150731821 150732031 + 15.1 0.000 intron (NR_148676, intron 8 of 16) intron (NR_148676, intron 8 of 16) 20171 NM_001353996 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr3-2296 chr3 111338190 111338400 + 15.1 0.000 Intergenic Intergenic -203902 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr4-2686 chr4 2071664 2071874 + 15.1 0.000 TTS (NM_181808) TTS (NM_181808) 12442 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr4-840 chr4 16140895 16141105 + 15.1 0.000 Intergenic Intergenic -56977 NM_006017 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr18-449 chr18 49250933 49251143 + 15.1 0.000 intron (NM_001353214, intron 13 of 17) MER20|DNA|hAT-Charlie -201270 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr22-818 chr22 19036021 19036231 + 15.1 0.000 TTS (NM_001173534) TTS (NM_001173534) 12249 NR_024157 25786 Hs.720269 NR_024157 ENSG00000273311 DGCR11 DGS-D DiGeorge syndrome critical region gene 11 ncRNA chr4-473 chr4 176195483 176195693 + 15.1 0.000 promoter-TSS (NM_144644) promoter-TSS (NM_144644) -3 NM_144644 132851 Hs.481235 NM_144644 ENSG00000150628 SPATA4 SPEF1B|TSARG2 spermatogenesis associated 4 protein-coding chr15-592 chr15 90529999 90530209 + 15.1 0.000 exon (NM_022769, exon 1 of 15) exon (NM_022769, exon 1 of 15) 181 NM_001042574 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr19-1700 chr19 18502199 18502409 + 15.1 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 19766 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr4-1418 chr4 17065875 17066085 + 15.1 0.000 Intergenic Intergenic 120077 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr2-1206 chr2 202807517 202807727 + 15.1 0.000 intron (NM_001288623, intron 9 of 12) L1M1|LINE|L1 21612 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr5-1236 chr5 164856138 164856348 + 15.1 0.000 Intergenic LTR105_Mam|LTR|ERVL 385964 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr20-1238 chr20 34952859 34953069 + 15.1 0.000 intron (NM_001322494, intron 1 of 12) intron (NM_001322494, intron 1 of 12) 2671 NM_001322495 2937 Hs.82327 NM_000178 ENSG00000100983 GSS GSHS|HEL-S-64p|HEL-S-88n glutathione synthetase protein-coding chr5-1365 chr5 60196492 60196702 + 15.1 0.000 intron (NM_001364599, intron 1 of 16) intron (NM_001364599, intron 1 of 16) 176066 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-2857 chr1 168145944 168146154 + 15.1 0.000 Intergenic Intergenic -8382 NM_001267609 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr11-1610 chr11 46248674 46248884 + 15.1 0.000 Intergenic Intergenic -28883 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr3-1449 chr3 42149122 42149332 + 15.1 0.000 promoter-TSS (NM_001265610) promoter-TSS (NM_001265610) -8 NM_001265609 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr5-799 chr5 54442350 54442560 + 15.1 0.000 Intergenic Intergenic -13244 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr13-291 chr13 60397048 60397258 + 15.1 0.000 promoter-TSS (NM_001146070) promoter-TSS (NM_001146070) -67 NM_001146070 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr7-2397 chr7 47882865 47883075 + 15.1 0.000 intron (NM_138295, intron 19 of 56) intron (NM_138295, intron 19 of 56) 65521 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr12-3858 chr12 107577991 107578201 + 15.1 0.000 intron (NM_001018072, intron 3 of 16) intron (NM_001018072, intron 3 of 16) -2778 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr7-2488 chr7 7099604 7099814 + 15.1 0.000 Intergenic Intergenic -2923 NR_034022 100131257 Hs.551110 NR_034022 LOC100131257 - zinc finger protein 655 pseudogene pseudo chr21-338 chr21 46004942 46005152 + 15.1 0.000 TTS (NM_001848) TTS (NM_001848) 23298 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr1-2965 chr1 146037070 146037280 + 15.1 0.000 Intergenic Intergenic 15069 NR_104085 101954276 NR_104085 ENSG00000201558 RNVU1-6 RNU1-99|vU1.6 RNA, variant U1 small nuclear 6 snRNA chr16-1556 chr16 82092284 82092494 + 15.1 0.000 intron (NM_002153, intron 4 of 4) L3|LINE|CR1 57136 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chr16-1862 chr16 76294558 76294768 + 15.1 0.000 intron (NR_136213, intron 1 of 23) intron (NR_136213, intron 1 of 23) -15189 NM_138994 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding chr2-1141 chr2 69829448 69829658 + 15.1 0.000 promoter-TSS (NM_178439) promoter-TSS (NM_178439) -107 NM_178439 64395 Hs.293971 NM_178439 ENSG00000087338 GMCL1 BTBD13|GCL|GCL1|SPATA29 germ cell-less 1, spermatogenesis associated protein-coding chr15-1557 chr15 68811459 68811669 + 15.1 0.000 intron (NM_006305, intron 1 of 6) intron (NM_006305, intron 1 of 6) -4463 NR_026808 80035 Hs.662150 NM_024970 ANP32A-IT1 C15orf28|HsT18971|NCRNA00321 ANP32A intronic transcript 1 ncRNA chr7-2112 chr7 17773258 17773468 + 15.1 0.000 Intergenic Intergenic 167131 NR_146933 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding chr5-1898 chr5 158384722 158384932 + 15.1 0.000 intron (NR_109888, intron 1 of 6) MLT1I|LTR|ERVL-MaLR 24946 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr5-1803 chr5 64869497 64869707 + 15.1 0.000 intron (NM_005869, intron 10 of 13) intron (NM_005869, intron 10 of 13) 100672 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr15-744 chr15 40380005 40380215 + 15.1 0.000 Intergenic L2a|LINE|L2 -2611 NM_001142761 90417 Hs.525796 NM_033286 ENSG00000128944 KNSTRN C15orf23|HSD11|SKAP|TRAF4AF1 kinetochore localized astrin (SPAG5) binding protein protein-coding chr3-2783 chr3 188421130 188421340 + 15.1 0.000 intron (NM_001167672, intron 2 of 9) intron (NM_001167672, intron 2 of 9) 147431 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr1-5331 chr1 227538299 227538509 + 15.1 0.000 Intergenic Intergenic -25152 NM_178549 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr8-1559 chr8 121405942 121406152 + 15.1 0.000 Intergenic Intergenic -233299 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr20-347 chr20 6122878 6123088 + 15.1 0.000 5' UTR (NM_017671, exon 1 of 15) 5' UTR (NM_017671, exon 1 of 15) 561 NM_017671 55612 Hs.472054 NM_017671 ENSG00000101311 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding chr10-1982 chr10 34490112 34490322 + 15.1 0.000 intron (NM_001184789, intron 3 of 22) intron (NM_001184789, intron 3 of 22) 325079 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr11-1710 chr11 74084925 74085135 + 15.1 0.000 intron (NM_001286577, intron 21 of 32) intron (NM_001286577, intron 21 of 32) -75793 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr9-764 chr9 113056755 113056965 + 15.1 0.000 promoter-TSS (NM_001282515) promoter-TSS (NM_001282515) -136 NM_001282515 7539 Hs.150406 NM_003408 ENSG00000136866 ZFP37 ZNF906|zfp-37 ZFP37 zinc finger protein protein-coding chr11-2783 chr11 74625104 74625314 + 15.1 0.000 intron (NM_001363597, intron 7 of 11) intron (NM_001363597, intron 7 of 11) 32627 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr7-1117 chr7 130051199 130051409 + 15.1 0.000 promoter-TSS (NM_001363701) promoter-TSS (NM_001363701) 81 NM_001363701 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 HSPC216|NIPA zinc finger C3HC-type containing 1 protein-coding chr12-1013 chr12 8692659 8692869 + 15.1 0.000 intron (NR_123740, intron 1 of 8) intron (NR_123740, intron 1 of 8) -4419 NM_001352268 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr21-869 chr21 39441250 39441460 + 15.1 0.000 intron (NM_152505, intron 1 of 9) intron (NM_152505, intron 1 of 9) 2847 NM_152505 150082 Hs.517284 NM_152505 ENSG00000157578 LCA5L C21orf13 lebercilin LCA5 like protein-coding chr20-446 chr20 31895130 31895340 + 15.1 0.000 intron (NR_148013, intron 3 of 16) MER65B|LTR|ERV1 15418 NR_160277 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr9-1011 chr9 98998521 98998731 + 15.1 0.000 intron (NM_001855, intron 6 of 41) intron (NM_001855, intron 6 of 41) 54719 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chrX-222 chrX 63351360 63351570 + 15.1 0.000 promoter-TSS (NM_001012968) promoter-TSS (NM_001012968) -133 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr1-4182 chr1 38872397 38872607 + 15.1 0.000 promoter-TSS (NR_135048) promoter-TSS (NR_135048) 846 NM_012333 26292 Hs.591506 NM_012333 ENSG00000214114 MYCBP AMY-1 MYC binding protein protein-coding chr1-1471 chr1 51236223 51236433 + 15.1 0.000 promoter-TSS (NM_014372) promoter-TSS (NM_014372) 55 NM_014372 26994 Hs.309641 NM_014372 ENSG00000123091 RNF11 CGI-123|SID1669 ring finger protein 11 protein-coding chr1-2562 chr1 19735933 19736143 + 15.1 0.000 intron (NM_001349112, intron 12 of 14) MLT1H2|LTR|ERVL-MaLR 63311 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr16-1209 chr16 65249887 65250097 + 15.1 0.000 Intergenic Intergenic -73419 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr6-1107 chr6 110816023 110816233 + 15.1 0.000 promoter-TSS (NM_015076) promoter-TSS (NM_015076) -273 NM_001300964 23097 Hs.744895 NM_015076 ENSG00000155111 CDK19 CDC2L6|CDK11|bA346C16.3 cyclin dependent kinase 19 protein-coding chr7-1866 chr7 15461513 15461723 + 15.1 0.000 intron (NM_001004320, intron 3 of 12) intron (NM_001004320, intron 3 of 12) 100397 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chr2-2659 chr2 212712009 212712219 + 15.1 0.000 Intergenic Intergenic -83217 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr2-2965 chr2 29548728 29548938 + 15.1 0.000 intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -73456 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr1-4035 chr1 201042878 201043088 + 15.1 0.000 intron (NM_000069, intron 40 of 43) intron (NM_000069, intron 40 of 43) -19269 NM_001252100 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr17-1166 chr17 31858583 31858793 + 15.1 0.000 intron (NM_018405, intron 1 of 3) intron (NM_018405, intron 1 of 3) 274 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr2-6751 chr2 38774535 38774745 + 15.1 0.000 Intergenic AluJb|SINE|Alu -3570 NM_024775 79833 Hs.143818 NM_024775 ENSG00000152147 GEMIN6 - gem nuclear organelle associated protein 6 protein-coding chr17-2828 chr17 17313586 17313796 + 15.1 0.000 intron (NM_020201, intron 2 of 4) L2b|LINE|L2 10318 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr17-1970 chr17 27245098 27245308 + 15.1 0.000 Intergenic Intergenic 48793 NR_039748 100616277 NR_039748 ENSG00000263583 MIR4522 - microRNA 4522 ncRNA chr6-1009 chr6 36373768 36373978 + 15.1 0.000 intron (NM_001207041, intron 1 of 5) MER91A|DNA|hAT-Tip100 13796 NM_016135 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr10-2139 chr10 48759106 48759316 + 15.1 0.000 intron (NM_020945, intron 12 of 61) L1ME1|LINE|L1 73748 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr2-2387 chr2 9347661 9347871 + 15.1 0.000 intron (NM_003887, intron 11 of 27) intron (NM_003887, intron 11 of 27) 74825 NR_134951 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr3-2347 chr3 147298639 147298849 + 15.1 0.000 Intergenic UCON8|DNA|DNA 93686 NR_033119 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chr8-1578 chr8 128067571 128067781 + 15.1 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) 18524 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr14-658 chr14 50311509 50311719 + 15.1 0.000 promoter-TSS (NM_015684) promoter-TSS (NM_015684) 615 NM_024884 79944 Hs.256034 NM_024884 ENSG00000087299 L2HGDH C14orf160|L2HGA L-2-hydroxyglutarate dehydrogenase protein-coding chr2-4442 chr2 189014807 189015017 + 15.1 0.000 Intergenic Intergenic 19282 NR_037401 100500837 NR_037401 ENSG00000284180 MIR3606 mir-3606 microRNA 3606 ncRNA chr14-923 chr14 100810936 100811146 + 15.1 0.000 Intergenic Intergenic -3450 NR_039729 100616495 NR_039729 ENSG00000266461 MIR2392 - microRNA 2392 ncRNA chr15-202 chr15 76905224 76905434 + 15.1 0.000 promoter-TSS (NM_001353009) promoter-TSS (NM_001353009) 11 NM_020843 49855 Hs.458986 NM_020843 ENSG00000140386 SCAPER IDDRP|MSTP063|ZNF291|Zfp291 S-phase cyclin A associated protein in the ER protein-coding chr16-666 chr16 28211171 28211381 + 15.1 0.000 intron (NM_001270940, intron 1 of 24) CpG 689 NM_001270940 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr9-2147 chr9 120403273 120403483 + 15.1 0.000 intron (NR_073558, intron 33 of 37) intron (NR_073558, intron 33 of 37) -158328 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr3-2975 chr3 78647936 78648146 + 15.1 0.000 intron (NM_002941, intron 19 of 30) intron (NM_002941, intron 19 of 30) 371418 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr17-965 chr17 78975368 78975578 + 15.1 0.000 intron (NM_005567, intron 3 of 5) intron (NM_005567, intron 3 of 5) 4450 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr7-3192 chr7 116713971 116714181 + 15.1 0.000 intron (NM_000245, intron 2 of 20) intron (NM_000245, intron 2 of 20) 41880 NM_001324401 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr10-1917 chr10 132961985 132962195 + 15.1 0.000 non-coding (NR_125763, exon 1 of 2) non-coding (NR_125763, exon 1 of 2) 147 NR_125763 103695432 Hs.680406 NR_125763 ENSG00000224758 LINC01167 TCONS_00018075 long intergenic non-protein coding RNA 1167 ncRNA chr2-2451 chr2 71995221 71995431 + 15.1 0.000 Intergenic Intergenic 152536 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr18-332 chr18 36420897 36421107 + 15.1 0.000 intron (NM_001281740, intron 3 of 28) intron (NM_001281740, intron 3 of 28) 123289 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr15-1513 chr15 53231370 53231580 + 15.1 0.000 Intergenic L1MA7|LINE|L1 115110 NR_147181 105370822 Hs.527821 NR_147181 ENSG00000259237 LINC02490 - long intergenic non-protein coding RNA 2490 ncRNA chr1-2065 chr1 19704483 19704693 + 15.1 0.000 intron (NM_001349112, intron 12 of 14) intron (NM_001349112, intron 12 of 14) 39713 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr16-944 chr16 66515792 66516002 + 15.1 0.000 intron (NM_001271935, intron 6 of 7) intron (NM_001271935, intron 6 of 7) 34225 NR_073520 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2 protein-coding chr12-1862 chr12 50517678 50517888 + 15.1 0.000 intron (NM_173602, intron 1 of 37) L2c|LINE|L2 12798 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr17-1753 chr17 10099125 10099335 + 15.1 0.000 intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) -62573 NM_201432 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr11-2931 chr11 68682538 68682748 + 15.1 0.000 Intergenic Intergenic -1901 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr22-838 chr22 41859053 41859263 + 15.1 0.000 intron (NR_103834, intron 1 of 21) Tigger9b|DNA|TcMar-Tigger -24493 NR_157279 112637020 NR_157279 SREBF2-AS1 821D11.7|RP5 SREBF2 antisense RNA 1 ncRNA chr5-1362 chr5 54835733 54835943 + 15.1 0.000 Intergenic Intergenic -91580 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr7-2664 chr7 5773855 5774065 + 15.1 0.000 intron (NM_207111, intron 1 of 16) intron (NM_207111, intron 1 of 16) 7703 NM_207111 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr6-1764 chr6 73181217 73181427 + 15.1 0.000 intron (NM_001160132, intron 11 of 13) intron (NM_001160132, intron 11 of 13) -37808 NR_046621 100873997 Hs.741819 NR_046621 ENSG00000229154 KCNQ5-AS1 - KCNQ5 antisense RNA 1 ncRNA chr19-1876 chr19 23957503 23957713 + 15.1 0.000 intron (NR_149007, intron 1 of 2) intron (NR_149007, intron 1 of 2) 345 NR_149007 100505851 Hs.190888 NR_149007 LOC100505851 - uncharacterized LOC100505851 ncRNA chr5-1218 chr5 130868414 130868624 + 15.1 0.000 Intergenic Intergenic 296737 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr11-3134 chr11 45766621 45766831 + 15.1 0.000 Intergenic Intergenic -4706 NR_027134 374387 Hs.632142 NM_199137 ENSG00000205106 LINC02716 DKFZp779M0652 long intergenic non-protein coding RNA 2716 ncRNA chr3-1266 chr3 185688924 185689134 + 15.1 0.000 intron (NR_138486, intron 6 of 15) intron (NR_138486, intron 6 of 15) -24223 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr19-1485 chr19 11339581 11339791 + 15.1 0.000 promoter-TSS (NM_004283) promoter-TSS (NM_004283) -29 NM_004283 9545 Hs.744916 NM_004283 ENSG00000105514 RAB3D D2-2|GOV|RAB16|RAD3D RAB3D, member RAS oncogene family protein-coding chr6-751 chr6 81753233 81753443 + 15.1 0.000 promoter-TSS (NM_017633) promoter-TSS (NM_017633) -657 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr8-1204 chr8 78556231 78556441 + 15.1 0.000 intron (NR_125389, intron 2 of 2) intron (NR_125389, intron 2 of 2) 2167 NR_125389 101927003 Hs.614849 NR_125389 ENSG00000254266 PKIA-AS1 - PKIA antisense RNA 1 ncRNA chr11-2634 chr11 33044434 33044644 + 15.1 0.000 intron (NM_001145541, intron 2 of 9) intron (NM_001145541, intron 2 of 9) 4524 NM_001145541 55346 Hs.655341 NM_018393 ENSG00000176148 TCP11L1 dJ85M6.3 t-complex 11 like 1 protein-coding chr20-668 chr20 13231473 13231683 + 15.1 0.000 intron (NM_080826, intron 1 of 5) intron (NM_080826, intron 1 of 5) 8109 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr11-2970 chr11 82233389 82233599 + 15.1 0.000 intron (NR_120571, intron 3 of 7) intron (NR_120571, intron 3 of 7) 170419 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr8-406 chr8 38177297 38177507 + 15.1 0.000 promoter-TSS (NM_014462) promoter-TSS (NM_014462) 547 NM_004874 9530 Hs.194726 NM_004874 ENSG00000156735 BAG4 BAG-4|SODD BCL2 associated athanogene 4 protein-coding chr3-976 chr3 144018896 144019106 + 15.1 0.000 Intergenic FRAM|SINE|Alu 45920 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr12-1404 chr12 1429107 1429317 + 15.1 0.000 intron (NR_027948, intron 18 of 19) intron (NR_027948, intron 18 of 19) -71279 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr13-785 chr13 72166261 72166471 + 15.1 0.000 Intergenic Intergenic -299162 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr6-1951 chr6 126697293 126697503 + 15.1 0.000 Intergenic Intergenic 212767 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr1-1319 chr1 150537966 150538176 + 15.1 0.000 Intergenic Intergenic -11298 NM_001288608 54507 Hs.516243 NM_019032 ENSG00000143382 ADAMTSL4 ADAMTSL-4|ECTOL2|TSRC1 ADAMTS like 4 protein-coding chr16-1839 chr16 65534317 65534527 + 15.1 0.000 intron (NR_027755, intron 2 of 8) L2c|LINE|L2 41878 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr7-2033 chr7 77331914 77332124 + 15.1 0.000 intron (NM_001350897, intron 18 of 29) intron (NM_001350897, intron 18 of 29) -83179 NR_110073 101927243 Hs.547753 NR_110073 LOC101927243 - uncharacterized LOC101927243 ncRNA chr8-420 chr8 143902626 143902836 + 15.1 0.000 Intergenic Intergenic -24267 NM_031308 83481 Hs.200412 NM_031308 ENSG00000261150 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding chr4-617 chr4 146520926 146521136 + 15.1 0.000 intron (NM_032128, intron 1 of 4) intron (NM_032128, intron 1 of 4) 909 NM_001317816 84068 Hs.659209 NM_032128 ENSG00000120519 SLC10A7 C4orf13|P7|SSASKS solute carrier family 10 member 7 protein-coding chr17-1586 chr17 49193861 49194071 + 15.1 0.000 Intergenic Intergenic 15415 NM_031498 2793 Hs.181781 NM_031498 ENSG00000167083 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 G protein subunit gamma transducin 2 protein-coding chr16-1457 chr16 84689337 84689547 + 15.1 0.000 Intergenic Intergenic -10558 NR_073578 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr15-690 chr15 34318688 34318898 + 15.1 0.000 promoter-TSS (NM_005135) promoter-TSS (NM_005135) 27 NM_005135 9990 Hs.510939 NM_005135 ENSG00000140199 SLC12A6 ACCPN|KCC3|KCC3A|KCC3B solute carrier family 12 member 6 protein-coding chr6-1792 chr6 116208393 116208603 + 15.1 0.000 intron (NM_152729, intron 6 of 11) intron (NM_152729, intron 6 of 11) 45577 NM_021648 23270 Hs.284141 NM_021648 ENSG00000187189 TSPYL4 dJ486I3.2 TSPY like 4 protein-coding chr5-1260 chr5 72251783 72251993 + 15.1 0.000 intron (NM_001286748, intron 4 of 11) intron (NM_001286748, intron 4 of 11) 68352 NM_001286748 23107 Hs.482491 NM_015084 ENSG00000113048 MRPS27 MRP-S27|S27mt mitochondrial ribosomal protein S27 protein-coding chr1-2947 chr1 70891576 70891786 + 15.1 0.000 intron (NR_028293, intron 2 of 4) intron (NR_028293, intron 2 of 4) -154825 NR_038420 100132618 Hs.720513 NR_038420 ZRANB2-AS1 - ZRANB2 antisense RNA 1 ncRNA chr7-1131 chr7 7176542 7176752 + 15.1 0.000 Intergenic Intergenic -5968 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr16-1203 chr16 31117423 31117633 + 15.1 0.000 promoter-TSS (NM_182958) promoter-TSS (NM_182958) -136 NM_032188 84148 Hs.533803 NM_032188 ENSG00000103510 KAT8 MOF|MYST1|ZC2HC8|hMOF lysine acetyltransferase 8 protein-coding chr5-2432 chr5 124583914 124584124 + 15.1 0.000 Intergenic Intergenic -145499 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr7-1727 chr7 11182864 11183074 + 15.1 0.000 Intergenic L1M5|LINE|L1 209097 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr10-1236 chr10 73653281 73653491 + 15.1 0.000 exon (NM_001114133, exon 3 of 4) exon (NM_001114133, exon 3 of 4) -2346 NM_024875 79933 Hs.645273 NM_024875 ENSG00000166317 SYNPO2L - synaptopodin 2 like protein-coding chr17-1105 chr17 80514101 80514311 + 15.1 0.000 Intergenic MLT2C1|LTR|ERVL -30632 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr1-3324 chr1 19463510 19463720 + 15.1 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 20680 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr14-691 chr14 104708605 104708815 + 15.1 0.000 exon (NM_022489, exon 10 of 23) exon (NM_022489, exon 10 of 23) -15487 NM_152328 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr1-7103 chr1 200488723 200488933 + 15.1 0.000 Intergenic Intergenic -78792 NM_001281294 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr11-1908 chr11 64658207 64658417 + 15.1 0.000 intron (NM_015080, intron 11 of 22) intron (NM_015080, intron 11 of 22) -14767 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chrX-466 chrX 153922911 153923121 + 15.1 0.000 intron (NM_001666, intron 1 of 21) intron (NM_001666, intron 1 of 21) 3248 NM_001666 393 Hs.701324 NM_001666 ENSG00000089820 ARHGAP4 C1|RGC1|RhoGAP4|SrGAP4|p115 Rho GTPase activating protein 4 protein-coding chr3-1545 chr3 194583843 194584053 + 15.1 0.000 promoter-TSS (NR_047573) promoter-TSS (NR_047573) -320 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr20-600 chr20 48841931 48842141 + 15.1 0.000 Intergenic Intergenic -14037 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr12-1301 chr12 131930136 131930346 + 15.1 0.000 intron (NM_025215, intron 2 of 5) CpG-6282 965 NM_025215 80324 Hs.592004 NM_025215 ENSG00000177192 PUS1 MLASA1 pseudouridine synthase 1 protein-coding chr3-910 chr3 9810328 9810538 + 15.1 0.000 non-coding (NR_037162, exon 1 of 11) non-coding (NR_037162, exon 1 of 11) 171 NR_037162 26140 Hs.726435 NM_015644 ENSG00000214021 TTLL3 HOTTL tubulin tyrosine ligase like 3 protein-coding chr4-1685 chr4 153085200 153085410 + 15.1 0.000 Intergenic Intergenic -67029 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr17-1317 chr17 80859351 80859561 + 15.1 0.000 intron (NM_001163034, intron 13 of 29) intron (NM_001163034, intron 13 of 29) -53824 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr7-2639 chr7 2049522 2049732 + 15.1 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 39425 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr11-2347 chr11 78840453 78840663 + 15.1 0.000 intron (NM_001098816, intron 12 of 33) intron (NM_001098816, intron 12 of 33) -265694 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr3-3582 chr3 57434142 57434352 + 15.1 0.000 intron (NM_001366028, intron 30 of 73) MLT1I|LTR|ERVL-MaLR 110097 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr18-467 chr18 44627322 44627532 + 15.1 0.000 Intergenic Intergenic -52646 NM_001130110 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr14-271 chr14 64503602 64503812 + 15.1 0.000 promoter-TSS (NM_001123329) promoter-TSS (NM_001123329) 131 NM_006977 7597 Hs.654571 NM_006977 ENSG00000089775 ZBTB25 C14orf51|KUP|ZNF46 zinc finger and BTB domain containing 25 protein-coding chr1-2563 chr1 21195092 21195302 + 15.1 0.000 Intergenic Intergenic -18300 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr9-1767 chr9 134314324 134314534 + 15.1 0.000 Intergenic Intergenic -12026 NM_002957 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr12-776 chr12 122350535 122350745 + 15.1 0.000 intron (NM_002956, intron 8 of 24) intron (NM_002956, intron 8 of 24) -44902 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chr1-1996 chr1 17633616 17633826 + 15.1 0.000 intron (NM_001319838, intron 6 of 17) intron (NM_001319838, intron 6 of 17) 15408 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr17-1156 chr17 17414417 17414627 + 15.1 0.000 Intergenic Intergenic -62478 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr5-2910 chr5 131355996 131356206 + 15.1 0.000 intron (NM_020240, intron 2 of 5) intron (NM_020240, intron 2 of 5) 92092 NM_020240 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding chr10-3397 chr10 29618435 29618645 + 15.1 0.000 intron (NM_001323599, intron 3 of 38) intron (NM_001323599, intron 3 of 38) -16194 NR_030634 100126327 NR_030634 ENSG00000216035 MIR938 MIRN938|hsa-mir-938 microRNA 938 ncRNA chr3-1980 chr3 139730003 139730213 + 15.1 0.000 Intergenic Intergenic -52058 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr2-4120 chr2 157501315 157501525 + 15.1 0.000 Intergenic Intergenic -57331 NM_004288 9595 Hs.270 NM_004288 ENSG00000115165 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding chr4-1683 chr4 152612600 152612810 + 15.1 0.000 Intergenic AluJb|SINE|Alu 67292 NM_152680 201799 Hs.518900 NM_152680 ENSG00000170006 TMEM154 - transmembrane protein 154 protein-coding chr22-714 chr22 20515057 20515267 + 15.1 0.000 intron (NM_001293237, intron 1 of 16) intron (NM_001293237, intron 1 of 16) 7115 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr19-2190 chr19 17669073 17669283 + 15.1 0.000 intron (NM_001080421, intron 5 of 41) intron (NM_001080421, intron 5 of 41) 19021 NM_001080421 23025 Hs.164502 NM_001080421 ENSG00000130477 UNC13A Munc13-1 unc-13 homolog A protein-coding chr10-4349 chr10 31696854 31697064 + 15.1 0.000 Intergenic L1ME4a|LINE|L1 211967 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr3-1133 chr3 11509252 11509462 + 15.1 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 59441 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr9-1691 chr9 94937566 94937776 + 15.1 0.000 intron (NR_147613, intron 1 of 2) L2c|LINE|L2 7883 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr4-780 chr4 147732665 147732875 + 15.1 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) 682 NM_024605 79658 Hs.368631 NM_024605 ENSG00000071205 ARHGAP10 GRAF2|PS-GAP|PSGAP Rho GTPase activating protein 10 protein-coding chr18-511 chr18 41121549 41121759 + 15.1 0.000 Intergenic L2a|LINE|L2 399023 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr14-593 chr14 76937340 76937550 + 15.1 0.000 Intergenic Intergenic -22193 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr2-1241 chr2 127398334 127398544 + 15.1 0.000 Intergenic Intergenic -19981 NM_000312 5624 Hs.224698 NM_000312 ENSG00000115718 PROC APC|PC|PROC1|THPH3|THPH4 protein C, inactivator of coagulation factors Va and VIIIa protein-coding chr13-626 chr13 48491517 48491727 + 15.1 0.000 intron (NM_001352426, intron 12 of 12) intron (NM_001352426, intron 12 of 12) 41458 NR_147985 1102 Hs.652712 NM_001268 ENSG00000136161 RCBTB2 CHC1L|RLG RCC1 and BTB domain containing protein 2 protein-coding chr14-1156 chr14 48838459 48838669 + 15.1 0.000 Intergenic Intergenic 747816 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr4-1198 chr4 80193010 80193220 + 15.1 0.000 intron (NM_020226, intron 2 of 9) intron (NM_020226, intron 2 of 9) -4388 NM_001099403 56978 Hs.373642 NM_020226 ENSG00000152784 PRDM8 EPM10|KMT8D|PFM5 PR/SET domain 8 protein-coding chr14-1089 chr14 50772405 50772615 + 15.1 0.000 intron (NM_016350, intron 8 of 28) intron (NM_016350, intron 8 of 28) -49287 NR_135258 105370489 Hs.569387 NR_135258 ENSG00000258843 LOC105370489 - uncharacterized LOC105370489 ncRNA chr17-3013 chr17 76036702 76036912 + 15.1 0.000 Intergenic Intergenic -9501 NM_001988 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr8-1863 chr8 16409272 16409482 + 15.1 0.000 Intergenic LTR8B|LTR|ERV1 -216586 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr17-2370 chr17 74960778 74960988 + 15.1 0.000 intron (NM_030630, intron 6 of 18) intron (NM_030630, intron 6 of 18) -9806 NR_110878 102723641 NR_110878 ENSG00000263586 HID1-AS1 - HID1 antisense RNA 1 ncRNA chr12-1709 chr12 7917785 7917995 + 15.1 0.000 Intergenic AluSq2|SINE|Alu 18297 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr8-728 chr8 104199956 104200166 + 15.1 0.000 intron (NM_001348498, intron 20 of 24) intron (NM_001348498, intron 20 of 24) -23274 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr5-1120 chr5 43122258 43122468 + 15.1 0.000 intron (NM_003432, intron 2 of 7) intron (NM_003432, intron 2 of 7) 798 NM_001330714 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr7-793 chr7 50418103 50418313 + 15.1 0.000 Intergenic Intergenic 32142 NM_001346560 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr14-1811 chr14 36826624 36826834 + 15.1 0.000 intron (NM_001171170, intron 2 of 10) Tigger15a|DNA|TcMar-Tigger 125662 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr8-2172 chr8 96456422 96456632 + 15.1 0.000 Intergenic Intergenic -37286 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr4-2203 chr4 127143901 127144111 + 15.1 0.000 Intergenic Intergenic -488951 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr19-2068 chr19 16767761 16767971 + 15.1 0.000 intron (NM_001007525, intron 10 of 18) L1MB3|LINE|L1 36674 NM_001347994 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr11-1867 chr11 126969958 126970168 + 15.1 0.000 intron (NM_001301097, intron 1 of 15) Tigger16a|DNA|TcMar-Tigger 18479 NR_036126 100422918 NR_036126 ENSG00000266215 MIR3167 - microRNA 3167 ncRNA chr11-1676 chr11 26648395 26648605 + 15.1 0.000 intron (NM_031418, intron 24 of 26) MER20|DNA|hAT-Charlie 73560 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr14-2205 chr14 101619666 101619876 + 15.1 0.000 Intergenic Intergenic 58420 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr2-3625 chr2 112999243 112999453 + 15.1 0.000 Intergenic LTR16B1|LTR|ERVL -6111 NM_014440 27179 Hs.278910 NM_014440 ENSG00000136694 IL36A FIL1|FIL1(EPSILON)|FIL1E|IL-1F6|IL1(EPSILON)|IL1F6 interleukin 36 alpha protein-coding chr1-2396 chr1 179175250 179175460 + 15.1 0.000 intron (NM_007314, intron 1 of 11) intron (NM_007314, intron 1 of 11) -32279 NM_005158 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr19-1503 chr19 48398165 48398375 + 15.1 0.000 intron (NM_000836, intron 1 of 12) CpG 3395 NM_000836 2906 Hs.445015 NM_000836 ENSG00000105464 GRIN2D EB11|EIEE46|GluN2D|NMDAR2D|NR2D glutamate ionotropic receptor NMDA type subunit 2D protein-coding chr1-5264 chr1 204598808 204599018 + 15.1 0.000 Intergenic L3|LINE|CR1 82507 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr19-2598 chr19 1960286 1960496 + 15.1 0.000 intron (NM_001319, intron 1 of 11) intron (NM_001319, intron 1 of 11) -5842 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr4-1236 chr4 1758745 1758955 + 15.1 0.000 Intergenic Intergenic -34443 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr12-955 chr12 105257040 105257250 + 15.1 0.000 Intergenic Intergenic -20915 NM_001251904 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr8-1121 chr8 108248718 108248928 + 15.1 0.000 promoter-TSS (NM_001568) promoter-TSS (NM_001568) -106 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr1-3479 chr1 58823675 58823885 + 15.1 0.000 intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 38629 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr19-2552 chr19 48552516 48552726 + 15.1 0.000 intron (NM_177973, intron 1 of 6) MIRc|SINE|MIR 449 NM_177973 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr2-2150 chr2 196171492 196171702 + 15.1 0.000 promoter-TSS (NM_004226) promoter-TSS (NM_004226) -19 NM_004226 9262 Hs.88297 NM_004226 ENSG00000081320 STK17B DRAK2 serine/threonine kinase 17b protein-coding chr12-2378 chr12 24822129 24822339 + 15.1 0.000 intron (NM_001178091, intron 9 of 9) intron (NM_001178091, intron 9 of 9) 79988 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr22-635 chr22 46484962 46485172 + 15.1 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 52553 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr2-4697 chr2 222506342 222506552 + 15.1 0.000 intron (NM_152386, intron 2 of 4) Tigger2b_Pri|DNA|TcMar-Tigger 81904 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr2-3158 chr2 196677500 196677710 + 15.1 0.000 intron (NM_001080539, intron 13 of 27) intron (NM_001080539, intron 13 of 27) 35407 NR_034036 100130452 Hs.591625 NR_034036 LOC100130452 - uncharacterized LOC100130452 ncRNA chr11-1857 chr11 102780536 102780746 + 15.1 0.000 promoter-TSS (NM_002425) promoter-TSS (NM_002425) -13 NM_002425 4319 Hs.2258 NM_002425 ENSG00000166670 MMP10 SL-2|STMY2 matrix metallopeptidase 10 protein-coding chr1-744 chr1 84077845 84078055 + 15.1 0.000 promoter-TSS (NM_207578) promoter-TSS (NM_207578) -25 NM_002731 5567 Hs.487325 NM_002731 ENSG00000142875 PRKACB PKA C-beta|PKACB protein kinase cAMP-activated catalytic subunit beta protein-coding chr7-1162 chr7 152675930 152676140 + 15.1 0.000 intron (NM_005431, intron 1 of 2) CpG 106 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr1-3819 chr1 21706677 21706887 + 15.1 0.000 exon (NM_001350168, exon 16 of 27) exon (NM_001350168, exon 16 of 27) -37425 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr8-1440 chr8 133092196 133092406 + 15.1 0.000 intron (NM_001045556, intron 1 of 8) intron (NM_001045556, intron 1 of 8) 10301 NM_001282965 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr17-1954 chr17 82837047 82837257 + 15.1 0.000 intron (NM_024702, intron 1 of 2) intron (NM_024702, intron 1 of 2) 2870 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr15-1086 chr15 48412181 48412391 + 15.1 0.000 intron (NM_000138, intron 65 of 65) intron (NM_000138, intron 65 of 65) 80089 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr1-1224 chr1 12230033 12230243 + 15.1 0.000 intron (NM_015378, intron 1 of 69) CpG 108 NM_015378 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr1-3208 chr1 158125081 158125291 + 15.1 0.000 Intergenic Intergenic 15454 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr3-1445 chr3 32510255 32510465 + 15.1 0.000 Intergenic Intergenic -3971 NR_106753 102465247 NR_106753 ENSG00000276147 MIR548AY hsa-mir-548ay microRNA 548ay ncRNA chr7-662 chr7 140541607 140541817 + 15.1 0.000 intron (NM_001318052, intron 13 of 18) intron (NM_001318052, intron 13 of 18) 60830 NR_134477 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding chr3-1583 chr3 127911651 127911861 + 15.1 0.000 Intergenic Intergenic -3476 NM_001370224 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr12-2128 chr12 87981878 87982088 + 15.1 0.000 intron (NM_001363616, intron 11 of 11) intron (NM_001363616, intron 11 of 11) 47418 NM_152589 160419 Hs.112930 NM_152589 ENSG00000165805 C12orf50 - chromosome 12 open reading frame 50 protein-coding chr15-910 chr15 57485836 57486046 + 15.1 0.000 intron (NM_032866, intron 8 of 18) intron (NM_032866, intron 8 of 18) -105963 NR_104368 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr2-1797 chr2 26179056 26179266 + 15.1 0.000 intron (NM_001168241, intron 2 of 5) intron (NM_001168241, intron 2 of 5) -1555 NM_001191033 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr1-3620 chr1 43296284 43296494 + 15.1 0.000 Intergenic Intergenic -4593 NM_001253357 7075 Hs.78824 NM_005424 ENSG00000066056 TIE1 JTK14|TIE tyrosine kinase with immunoglobulin like and EGF like domains 1 protein-coding chr1-3141 chr1 62384700 62384910 + 15.1 0.000 Intergenic Intergenic -51499 NM_001017416 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr8-1074 chr8 127928489 127928699 + 15.1 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 20129 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr2-4131 chr2 163667535 163667745 + 15.1 0.000 intron (NM_001321825, intron 1 of 1) L2c|LINE|L2 68368 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr7-1536 chr7 131164615 131164825 + 15.1 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 54626 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr1-2155 chr1 19918950 19919160 + 15.1 0.000 TTS (NM_014589) TTS (NM_014589) 4562 NM_014589 30814 Hs.272372 NM_014589 ENSG00000188784 PLA2G2E GIIE sPLA2|sPLA2-IIE phospholipase A2 group IIE protein-coding chr9-2606 chr9 6355849 6356059 + 15.1 0.000 Intergenic UCON74|DNA?|DNA? 27579 NM_001001874 89882 Hs.351815 NM_033516 ENSG00000170777 TPD52L3 D55|NYDSP25|hD55 TPD52 like 3 protein-coding chr2-2354 chr2 210477372 210477582 + 15.1 0.000 promoter-TSS (NM_001136575) promoter-TSS (NM_001136575) -208 NM_001122633 1373 Hs.149252 NM_001875 ENSG00000021826 CPS1 CPSASE1|PHN carbamoyl-phosphate synthase 1 protein-coding chr11-647 chr11 68839189 68839399 + 15.1 0.000 intron (NM_001031847, intron 1 of 18) intron (NM_001031847, intron 1 of 18) 2622 NM_001876 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr6-927 chr6 35732102 35732312 + 15.1 0.000 non-coding (NR_027117, exon 5 of 10) non-coding (NR_027117, exon 5 of 10) -3624 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr8-1433 chr8 119636955 119637165 + 15.1 0.000 intron (NM_001330600, intron 2 of 25) intron (NM_001330600, intron 2 of 25) 1779 NM_006209 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr2-1745 chr2 39871307 39871517 + 15.1 0.000 Intergenic Intergenic -46222 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr19-1589 chr19 10864493 10864703 + 15.1 0.000 intron (NM_001136482, intron 6 of 6) L2b|LINE|L2 -6955 NM_001370088 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr5-593 chr5 139342371 139342581 + 15.1 0.000 promoter-TSS (NM_001033112) promoter-TSS (NM_001033112) 42 NM_001033112 51247 Hs.396644 NM_016480 ENSG00000120727 PAIP2 PAIP-2|PAIP2A poly(A) binding protein interacting protein 2 protein-coding chr3-1791 chr3 31106297 31106507 + 15.1 0.000 Intergenic Intergenic 55385 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr7-1314 chr7 112420375 112420585 + 15.1 0.000 Intergenic L2a|LINE|L2 -2664 NM_001197080 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr8-1362 chr8 120036231 120036441 + 15.1 0.000 intron (NM_022783, intron 8 of 8) intron (NM_022783, intron 8 of 8) -88766 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr3-2403 chr3 188948285 188948495 + 15.1 0.000 promoter-TSS (NR_046873) promoter-TSS (NR_046873) -751 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr6-1495 chr6 129861336 129861546 + 15.1 0.000 promoter-TSS (NM_001010876) promoter-TSS (NM_001010876) -126 NM_001010876 253582 NM_001010876 ENSG00000203756 TMEM244 C6orf191|bA174C7.4 transmembrane protein 244 protein-coding chr1-2478 chr1 94802160 94802370 + 15.1 0.000 intron (NR_160783, intron 1 of 3) MER96|DNA|hAT-Tip100 17967 NR_160784 101928079 Hs.596857 NR_104131 ENSG00000224081 SLC44A3-AS1 LINC01057|XLOC_000303 SLC44A3 antisense RNA 1 ncRNA chr17-717 chr17 81487901 81488111 + 15.1 0.000 Intergenic CpG 24793 NM_001614 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr1-3340 chr1 32925753 32925963 + 15.1 0.000 Intergenic HERVS71-int|LTR|ERV1 -24469 NM_001329723 113452 Hs.534521 NM_033504 ENSG00000121900 TMEM54 BCLP|CAC-1|CAC1 transmembrane protein 54 protein-coding chr12-1075 chr12 27462234 27462444 + 15.1 0.000 Intergenic Intergenic -4471 NM_001145010 341346 Hs.282121 NM_001145010 ENSG00000165935 SMCO2 C12orf70 single-pass membrane protein with coiled-coil domains 2 protein-coding chr11-3228 chr11 69074648 69074858 + 15.1 0.000 intron (NM_139075, intron 13 of 24) intron (NM_139075, intron 13 of 24) -8423 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr17-1125 chr17 42677060 42677270 + 15.1 0.000 promoter-TSS (NM_024927) promoter-TSS (NM_024927) -171 NR_073573 79990 Hs.632251 NM_024927 ENSG00000068137 PLEKHH3 - pleckstrin homology, MyTH4 and FERM domain containing H3 protein-coding chr8-1195 chr8 57885780 57885990 + 15.1 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -92473 NR_130934 100505477 Hs.434693 NR_130934 ENSG00000205293 LINC01602 T1560 long intergenic non-protein coding RNA 1602 ncRNA chr1-2874 chr1 208304388 208304598 + 15.1 0.000 Intergenic MIRb|SINE|MIR -60109 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr9-1670 chr9 37938196 37938406 + 15.1 0.000 intron (NM_003028, intron 5 of 5) intron (NM_003028, intron 5 of 5) -33948 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr12-1050 chr12 96308878 96309088 + 15.1 0.000 intron (NM_002595, intron 5 of 16) L2c|LINE|L2 53485 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr12-1936 chr12 104329789 104329999 + 15.1 0.000 intron (NM_001093771, intron 13 of 16) L1MEc|LINE|L1 26155 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr8-1573 chr8 127793956 127794166 + 15.1 0.000 promoter-TSS (NR_003367) promoter-TSS (NR_003367) -472 NR_003367 5820 Hs.133107 NR_003367 ENSG00000249859 PVT1 LINC00079|MIR1204HG|NCRNA00079|onco-lncRNA-100 Pvt1 oncogene ncRNA chr1-3123 chr1 46183180 46183390 + 15.1 0.000 intron (NM_005727, intron 3 of 8) intron (NM_005727, intron 3 of 8) -6797 NM_001303427 110117499 Hs.655387 NM_001303427 ENSG00000278139 LOC110117498-PIK3R3 - LOC110117498-PIK3R3 readthrough protein-coding chr15-338 chr15 65832797 65833007 + 15.1 0.000 Intergenic Intergenic -36589 NM_004663 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr4-2227 chr4 145493676 145493886 + 15.1 0.000 intron (NM_001354817, intron 1 of 6) L2a|LINE|L2 9199 NR_108077 101927659 Hs.519005 NR_108077 ENSG00000250582 SMAD1-AS2 - SMAD1 antisense RNA 2 ncRNA chr2-1905 chr2 156342470 156342680 + 15.1 0.000 promoter-TSS (NR_147695) promoter-TSS (NR_147695) -455 NR_147695 440918 Hs.641142 NR_147695 FLJ46875 - uncharacterized LOC440918 ncRNA chr9-1410 chr9 121529660 121529870 + 15.1 0.000 Intergenic Intergenic -29738 NR_003191 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr10-1772 chr10 63217319 63217529 + 15.1 0.000 intron (NR_134512, intron 1 of 21) intron (NR_134512, intron 1 of 21) 51799 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr11-4070 chr11 19597222 19597432 + 15.1 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 22017 NR_039706 100616118 NR_039706 ENSG00000265210 MIR4486 - microRNA 4486 ncRNA chr14-805 chr14 77800209 77800419 + 15.1 0.000 intron (NR_158988, intron 1 of 10) CpG 205 NM_001366488 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr22-1083 chr22 27792941 27793151 + 15.1 0.000 intron (NM_002430, intron 1 of 1) intron (NM_002430, intron 1 of 1) 8710 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr4-1304 chr4 118835071 118835281 + 15.1 0.000 intron (NM_014822, intron 1 of 22) intron (NM_014822, intron 1 of 22) 950 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr6-1286 chr6 126748208 126748418 + 15.1 0.000 Intergenic Intergenic 263682 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr1-4342 chr1 65717781 65717991 + 15.1 0.000 Intergenic L1M1|LINE|L1 -74624 NM_001297440 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr15-412 chr15 63372492 63372702 + 15.1 0.000 intron (NR_135511, intron 2 of 9) intron (NR_135511, intron 2 of 9) 9249 NR_135511 771 Hs.210995 NM_001218 ENSG00000074410 CA12 CA-XII|CAXII|HsT18816|T18816 carbonic anhydrase 12 protein-coding chr2-1656 chr2 53970276 53970486 + 15.1 0.000 promoter-TSS (NM_001320586) promoter-TSS (NM_001320586) 612 NM_014614 23198 Hs.413801 NM_014614 ENSG00000068878 PSME4 PA200 proteasome activator subunit 4 protein-coding chr16-835 chr16 85978356 85978566 + 15.1 0.000 Intergenic Intergenic 60114 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr19-998 chr19 47079488 47079698 + 15.1 0.000 intron (NM_015168, intron 11 of 14) intron (NM_015168, intron 11 of 14) -30969 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chr13-748 chr13 24519473 24519683 + 15.1 0.000 Intergenic Intergenic -6800 NM_006437 143 Hs.744855 NM_006437 ENSG00000102699 PARP4 ADPRTL1|ARTD4|PARP-4|PARPL|PH5P|VAULT3|VPARP|VWA5C|p193 poly(ADP-ribose) polymerase family member 4 protein-coding chr7-1337 chr7 23939035 23939245 + 15.1 0.000 Intergenic L1MA5A|LINE|L1 228921 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr17-3977 chr17 65013878 65014088 + 15.1 0.000 3' UTR (NM_001282425, exon 4 of 4) 3' UTR (NM_001282425, exon 4 of 4) -38398 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo chr10-2156 chr10 94178654 94178864 + 15.1 0.000 intron (NM_001165979, intron 3 of 31) intron (NM_001165979, intron 3 of 31) -69965 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr8-1974 chr8 74834722 74834932 + 15.1 0.000 intron (NM_015886, intron 2 of 5) intron (NM_015886, intron 2 of 5) 10293 NM_015886 51050 Hs.98558 NM_015886 ENSG00000137558 PI15 CRISP8|P24TI|P25TI peptidase inhibitor 15 protein-coding chr8-2720 chr8 100458687 100458897 + 15.1 0.000 Intergenic MIRc|SINE|MIR 76029 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr12-1917 chr12 91178152 91178362 + 15.1 0.000 intron (NM_001920, intron 2 of 7) intron (NM_001920, intron 2 of 7) 389 NM_133504 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr14-978 chr14 73790026 73790236 + 15.1 0.000 intron (NR_109995, intron 2 of 2) intron (NR_109995, intron 2 of 2) 2771 NR_109995 100506476 Hs.287299 NR_109995 LOC100506476 - uncharacterized LOC100506476 ncRNA chr20-781 chr20 50224622 50224832 + 15.1 0.000 Intergenic Intergenic -32658 NR_125739 101927559 Hs.442486 NR_125739 ENSG00000277449 CEBPB-AS1 - CEBPB antisense RNA 1 ncRNA chr11-2363 chr11 118607796 118608006 + 15.1 0.000 intron (NM_001144759, intron 1 of 20) CpG 286 NM_001144758 23187 Hs.504062 NM_015157 ENSG00000019144 PHLDB1 LL5A pleckstrin homology like domain family B member 1 protein-coding chr9-2179 chr9 131085104 131085314 + 15.1 0.000 intron (NM_006059, intron 24 of 27) intron (NM_006059, intron 24 of 27) -11267 NR_033701 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr13-1800 chr13 31731088 31731298 + 15.1 0.000 Intergenic Intergenic -8333 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr16-2441 chr16 83404367 83404577 + 15.1 0.000 intron (NM_001220489, intron 5 of 12) MIRb|SINE|MIR -103874 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr19-2776 chr19 45010376 45010586 + 15.1 0.000 intron (NM_006509, intron 2 of 10) L2a|LINE|L2 9017 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr16-1152 chr16 9854738 9854948 + 15.1 0.000 intron (NM_001134408, intron 4 of 13) intron (NM_001134408, intron 4 of 13) 327224 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr20-738 chr20 9040909 9041119 + 15.1 0.000 Intergenic Intergenic -28040 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr15-695 chr15 43229780 43229990 + 15.1 0.000 Intergenic Intergenic -8760 NM_001114134 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chr3-3217 chr3 196247033 196247243 + 15.1 0.000 intron (NM_005017, intron 6 of 9) MIRc|SINE|MIR 30604 NM_152672 200931 Hs.630585 NM_152672 ENSG00000163959 SLC51A OSTA|OSTalpha solute carrier family 51 alpha subunit protein-coding chr5-949 chr5 96066556 96066766 + 15.1 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) -12477 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr3-3035 chr3 122353278 122353488 + 15.1 0.000 Intergenic Intergenic 28135 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr22-916 chr22 35648903 35649113 + 15.1 0.000 intron (NM_030641, intron 1 of 2) MamRep1879|DNA|hAT-Tip100? 562 NM_030641 80830 Hs.257352 NM_030641 ENSG00000221963 APOL6 APOL-VI|APOLVI apolipoprotein L6 protein-coding chr2-2559 chr2 218832559 218832769 + 15.1 0.000 promoter-TSS (NM_017431) promoter-TSS (NM_017431) -861 NM_017431 53632 Hs.591634 NM_017431 ENSG00000115592 PRKAG3 AMPKG3 protein kinase AMP-activated non-catalytic subunit gamma 3 protein-coding chr18-555 chr18 70613828 70614038 + 15.1 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 37021 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr5-1267 chr5 120614512 120614722 + 15.1 0.000 intron (NM_001308088, intron 1 of 3) intron (NM_001308088, intron 1 of 3) 83153 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr2-2301 chr2 75157577 75157787 + 15.1 0.000 intron (NM_015727, intron 1 of 3) intron (NM_015727, intron 1 of 3) 41838 NM_001058 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr9-884 chr9 112881545 112881755 + 15.1 0.000 intron (NM_033051, intron 3 of 3) L2b|LINE|L2 9226 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr6-1010 chr6 37399639 37399849 + 15.1 0.000 Intergenic MLT2B4|LTR|ERVL -33477 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr6-1517 chr6 12296170 12296380 + 15.1 0.000 3' UTR (NM_001955, exon 5 of 5) 3' UTR (NM_001955, exon 5 of 5) 5914 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr1-2272 chr1 225428695 225428905 + 15.1 0.000 promoter-TSS (NM_002296) promoter-TSS (NM_002296) 55 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr6-1955 chr6 130646918 130647128 + 15.1 0.000 Intergenic Intergenic -180382 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr2-2132 chr2 70143574 70143784 + 15.1 0.000 Intergenic Intergenic -18363 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chrX-890 chrX 41922087 41922297 + 15.1 0.000 intron (NM_003688, intron 1 of 26) intron (NM_003688, intron 1 of 26) 842 NM_003688 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr4-1650 chr4 107183222 107183432 + 15.1 0.000 Intergenic Intergenic -147014 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr12-1606 chr12 50222563 50222773 + 15.1 0.000 promoter-TSS (NM_001113547) promoter-TSS (NM_001113547) -10 NM_001113547 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr11-2539 chr11 78596933 78597143 + 15.1 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -22174 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr7-3707 chr7 55160605 55160815 + 15.1 0.000 intron (NM_201284, intron 12 of 15) intron (NM_201284, intron 12 of 15) 28239 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr3-1015 chr3 107404811 107405021 + 15.1 0.000 Intergenic Intergenic -22757 NR_126332 101929579 Hs.552750 NR_126332 LOC101929579 - uncharacterized LOC101929579 ncRNA chr15-1503 chr15 48693457 48693667 + 15.1 0.000 Intergenic L2a|LINE|L2 -47774 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr15-829 chr15 99253767 99253977 + 15.1 0.000 intron (NR_135755, intron 1 of 8) L2b|LINE|L2 2391 NM_001321678 123355 Hs.578684 NM_144598 ENSG00000168904 LRRC28 - leucine rich repeat containing 28 protein-coding chr9-1128 chr9 111109016 111109226 + 15.1 0.000 Intergenic Intergenic -70123 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr22-476 chr22 30330825 30331035 + 15.1 0.000 Intergenic Intergenic -3989 NM_001204240 83874 Hs.655273 NM_031937 ENSG00000099992 TBC1D10A EPI64|TBC1D10|dJ130H16.1|dJ130H16.2 TBC1 domain family member 10A protein-coding chr20-1297 chr20 53805599 53805809 + 15.1 0.000 Intergenic MER102b|DNA|hAT-Charlie 70005 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr15-781 chr15 48644974 48645184 + 15.1 0.000 intron (NM_000138, intron 1 of 65) CpG 709 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr1-5342 chr1 229557479 229557689 + 15.1 0.000 intron (NM_012089, intron 1 of 12) intron (NM_012089, intron 1 of 12) 1123 NM_012089 23456 Hs.17614 NM_012089 ENSG00000135776 ABCB10 EST20237|M-ABC2|MTABC2 ATP binding cassette subfamily B member 10 protein-coding chr6-1545 chr6 72788170 72788380 + 15.1 0.000 intron (NM_001160132, intron 1 of 13) MIRb|SINE|MIR 157780 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr3-2491 chr3 150422247 150422457 + 15.1 0.000 intron (NM_001303264, intron 1 of 2) intron (NM_001303264, intron 1 of 2) 14054 NM_001303264 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr5-1071 chr5 177317967 177318177 + 15.0 0.000 Intergenic MER21-int|LTR|ERVL -6174 NM_001142935 83463 Hs.743332 NM_031300 ENSG00000213347 MXD3 BHLHC13|MAD3|MYX MAX dimerization protein 3 protein-coding chr3-771 chr3 186426036 186426246 + 15.0 0.000 Intergenic Intergenic -14204 NR_151709 107986164 Hs.131227 NR_151708 ENSG00000234548 LINC02020 - long intergenic non-protein coding RNA 2020 ncRNA chr2-1119 chr2 202033533 202033743 + 15.0 0.000 promoter-TSS (NM_003507) promoter-TSS (NM_003507) -949 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr10-3245 chr10 119284868 119285078 + 15.0 0.000 intron (NM_005308, intron 1 of 15) L5|LINE|RTE-X 77402 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr3-1979 chr3 136595949 136596159 + 15.0 0.000 intron (NM_005862, intron 4 of 33) Tigger1|DNA|TcMar-Tigger 156324 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr5-2388 chr5 95715844 95716054 + 15.0 0.000 intron (NM_001349303, intron 2 of 8) L1ME3B|LINE|L1 -15387 NM_014899 22836 Hs.445030 NM_014899 ENSG00000164292 RHOBTB3 - Rho related BTB domain containing 3 protein-coding chr6-1644 chr6 132341756 132341966 + 15.0 0.000 intron (NM_015529, intron 4 of 11) MIRc|SINE|MIR 59614 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr5-1319 chr5 96220006 96220216 + 15.0 0.000 intron (NR_130776, intron 1 of 4) MLT1L|LTR|ERVL-MaLR 140973 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr2-3403 chr2 39994327 39994537 + 15.0 0.000 intron (NR_038441, intron 2 of 4) Tigger3|DNA|TcMar-Tigger 76798 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr16-1418 chr16 4115025 4115235 + 15.0 0.000 exon (NM_001116, exon 2 of 11) exon (NM_001116, exon 2 of 11) 1312 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr7-714 chr7 106542801 106543011 + 15.0 0.000 Intergenic Intergenic 118252 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr5-1475 chr5 88836538 88836748 + 15.0 0.000 intron (NM_001131005, intron 2 of 10) intron (NM_001131005, intron 2 of 10) -9455 NM_001364342 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr10-1655 chr10 109915064 109915274 + 15.0 0.000 intron (NM_020383, intron 1 of 20) intron (NM_020383, intron 1 of 20) 8077 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr16-1715 chr16 27235446 27235656 + 15.0 0.000 intron (NM_145080, intron 2 of 7) intron (NM_145080, intron 2 of 7) 31576 NM_001145348 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr4-1329 chr4 150510563 150510773 + 15.0 0.000 intron (NM_001367550, intron 40 of 56) intron (NM_001367550, intron 40 of 56) -68421 NR_149035 729558 Hs.647978 NR_149035 ENSG00000249690 LOC729558 - uncharacterized LOC729558 ncRNA chr10-3390 chr10 28906108 28906318 + 15.0 0.000 Intergenic Intergenic 59805 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr12-760 chr12 95073567 95073777 + 15.0 0.000 promoter-TSS (NM_003297) promoter-TSS (NM_003297) -54 NM_001127362 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding chr6-1169 chr6 43125192 43125402 + 15.0 0.000 intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) -45972 NM_003131 6722 Hs.520140 NM_003131 ENSG00000112658 SRF MCM1 serum response factor protein-coding chrX-1101 chrX 10884307 10884517 + 15.0 0.000 Intergenic Intergenic -50729 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr19-1292 chr19 1401557 1401767 + 15.0 0.000 promoter-TSS (NM_000156) promoter-TSS (NM_000156) -120 NM_000156 2593 Hs.81131 NM_000156 ENSG00000130005 GAMT CCDS2|HEL-S-20|PIG2|TP53I2 guanidinoacetate N-methyltransferase protein-coding chr4-2491 chr4 13143775 13143985 + 15.0 0.000 Intergenic Intergenic 340460 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr16-1053 chr16 89190300 89190510 + 15.0 0.000 exon (NM_004933, exon 8 of 14) exon (NM_004933, exon 8 of 14) 10132 NM_001366322 146429 Hs.447544 NM_001242757 ENSG00000259803 SLC22A31 - solute carrier family 22 member 31 protein-coding chr2-2191 chr2 41934190 41934400 + 15.0 0.000 promoter-TSS (NR_110262) promoter-TSS (NR_110262) -572 NR_110263 101929723 Hs.369330 NR_110262 ENSG00000234362 LINC01914 - long intergenic non-protein coding RNA 1914 ncRNA chr16-1314 chr16 89381453 89381663 + 15.0 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) -49360 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr5-1288 chr5 178587953 178588163 + 15.0 0.000 intron (NM_173465, intron 1 of 28) intron (NM_173465, intron 1 of 28) 2335 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr11-1569 chr11 95376042 95376252 + 15.0 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -143672 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr6-1161 chr6 26520902 26521112 + 15.0 0.000 promoter-TSS (NR_026790) promoter-TSS (NR_026790) -699 NR_026790 493812 Hs.272939 NR_026790 ENSG00000228223 HCG11 CTA-14H9.3|bK14H9.3 HLA complex group 11 ncRNA chr4-1063 chr4 99403760 99403970 + 15.0 0.000 Intergenic Intergenic 31269 NM_001166504 131 Hs.389 NM_000673 ENSG00000196344 ADH7 ADH4 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding chr19-1702 chr19 19475844 19476054 + 15.0 0.000 intron (NM_001359631, intron 2 of 10) intron (NM_001359631, intron 2 of 10) 39599 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr15-1563 chr15 70792245 70792455 + 15.0 0.000 Intergenic MIR3|SINE|MIR -28792 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr9-2116 chr9 95157404 95157614 + 15.0 0.000 intron (NM_001243744, intron 6 of 13) intron (NM_001243744, intron 6 of 13) -71415 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr12-1824 chr12 12749450 12749660 + 15.0 0.000 intron (NM_001130415, intron 1 of 1) MER51A|LTR|ERV1 -15094 NR_030344 693198 NR_030344 ENSG00000207983 MIR613 MIRN613|hsa-mir-613 microRNA 613 ncRNA chr2-3222 chr2 228025899 228026109 + 15.0 0.000 intron (NM_030623, intron 4 of 10) THE1B|LTR|ERVL-MaLR 154373 NM_178821 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr18-239 chr18 10798646 10798856 + 15.0 0.000 intron (NM_022068, intron 11 of 51) intron (NM_022068, intron 11 of 51) -39102 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr3-4123 chr3 114759521 114759731 + 15.0 0.000 promoter-TSS (NM_001164345) promoter-TSS (NM_001164345) -519 NM_001164345 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr14-500 chr14 22822551 22822761 + 15.0 0.000 Intergenic CpG -2845 NM_001126106 9056 Hs.513147 NM_003982 ENSG00000155465 SLC7A7 LAT3|LPI|MOP-2|Y+LAT1|y+LAT-1 solute carrier family 7 member 7 protein-coding chr16-1518 chr16 31090673 31090883 + 15.0 0.000 TTS (NM_024006) TTS (NM_024006) -1969 NM_001039503 339105 Hs.569575 NM_001039503 ENSG00000151006 PRSS53 POL3S|UNQ308 serine protease 53 protein-coding chr1-2355 chr1 35288215 35288425 + 15.0 0.000 intron (NM_005095, intron 1 of 29) intron (NM_005095, intron 1 of 29) 19611 NM_001350140 9202 Hs.269211 NM_005095 ENSG00000146463 ZMYM4 CDIR|MYM|ZNF198L3|ZNF262 zinc finger MYM-type containing 4 protein-coding chr8-1312 chr8 125526837 125527047 + 15.0 0.000 Intergenic MER5A|DNA|hAT-Charlie 94733 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr9-1073 chr9 130579664 130579874 + 15.0 0.000 promoter-TSS (NR_027440) promoter-TSS (NR_027440) 192 NM_003934 8939 Hs.98751 NM_003934 ENSG00000107164 FUBP3 FBP3 far upstream element binding protein 3 protein-coding chr9-771 chr9 127133699 127133909 + 15.0 0.000 intron (NM_001190729, intron 8 of 17) intron (NM_001190729, intron 8 of 17) -11169 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr10-1388 chr10 60238114 60238324 + 15.0 0.000 intron (NM_001204403, intron 8 of 43) intron (NM_001204403, intron 8 of 43) -97203 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr22-1094 chr22 32842377 32842587 + 15.0 0.000 intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 41666 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr15-1199 chr15 42158559 42158769 + 15.0 0.000 TTS (NM_001301138) TTS (NM_001301138) -2028 NM_213600 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr9-671 chr9 127802970 127803180 + 15.0 0.000 promoter-TSS (NM_001018078) promoter-TSS (NM_001018078) -106 NM_001018078 2356 Hs.335084 NM_004957 ENSG00000136877 FPGS - folylpolyglutamate synthase protein-coding chr12-1243 chr12 29164807 29165017 + 15.0 0.000 intron (NM_001271783, intron 1 of 11) intron (NM_001271783, intron 1 of 11) 15634 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr17-688 chr17 59220423 59220633 + 15.0 0.000 promoter-TSS (NM_001165994) promoter-TSS (NM_001165994) 17 NM_001165993 284161 Hs.631744 NM_182569 ENSG00000153982 GDPD1 GDE4 glycerophosphodiester phosphodiesterase domain containing 1 protein-coding chr19-1268 chr19 11293854 11294064 + 15.0 0.000 Intergenic CpG -2201 NR_104199 26526 Hs.579784 NM_012466 ENSG00000130167 TSPAN16 TM-8|TM4-B|TM4SF16 tetraspanin 16 protein-coding chr8-459 chr8 127926311 127926521 + 15.0 0.000 intron (NR_003367, intron 2 of 8) LTR16A1|LTR|ERVL 22307 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr10-1687 chr10 3825900 3826110 + 15.0 0.000 Intergenic Intergenic -7945 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr9-856 chr9 33024564 33024774 + 15.0 0.000 promoter-TSS (NM_001314039) promoter-TSS (NM_001314039) 451 NR_160926 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr2-2000 chr2 60883022 60883232 + 15.0 0.000 intron (NM_002908, intron 1 of 10) intron (NM_002908, intron 1 of 10) 1553 NM_001291746 5966 Hs.631886 NM_002908 ENSG00000162924 REL C-Rel REL proto-oncogene, NF-kB subunit protein-coding chr1-2406 chr1 211559804 211560014 + 15.0 0.000 Intergenic Intergenic 19252 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr5-904 chr5 34660515 34660725 + 15.0 0.000 intron (NM_001145520, intron 1 of 17) MIR3|SINE|MIR 4129 NM_001145520 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr2-2449 chr2 71615180 71615390 + 15.0 0.000 intron (NM_001130985, intron 40 of 54) intron (NM_001130985, intron 40 of 54) 148586 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr6-1641 chr6 125818720 125818930 + 15.0 0.000 promoter-TSS (NR_126386) promoter-TSS (NR_126386) 33 NR_126386 104355145 Hs.590370 NR_126386 ENSG00000232131 NCOA7-AS1 - NCOA7 antisense RNA 1 ncRNA chr11-1794 chr11 96098711 96098921 + 15.0 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -174609 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr17-1388 chr17 8222907 8223117 + 15.0 0.000 non-coding (NR_026951, exon 2 of 3) non-coding (NR_026951, exon 2 of 3) 1031 NR_026951 284029 Hs.121692 NM_173621 ENSG00000178977 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA chr1-1631 chr1 161314270 161314480 + 15.0 0.000 promoter-TSS (NR_103459) promoter-TSS (NR_103459) -1 NM_003001 6391 Hs.444472 NM_003001 ENSG00000143252 SDHC CYB560|CYBL|PGL3|QPS1|SDH3 succinate dehydrogenase complex subunit C protein-coding chr1-3336 chr1 27504315 27504525 + 15.0 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -14253 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr4-692 chr4 2220141 2220351 + 15.0 0.000 intron (NM_181808, intron 3 of 25) LTR41C|LTR|ERVL 21875 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr8-1046 chr8 143345118 143345328 + 15.0 0.000 intron (NM_001258447, intron 1 of 13) intron (NM_001258447, intron 1 of 13) -10343 NM_052963 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr8-1862 chr8 15442765 15442975 + 15.0 0.000 Intergenic MER31B|LTR|ERV1 -97217 NM_178234 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr5-635 chr5 178205141 178205351 + 15.0 0.000 intron (NM_031266, intron 2 of 7) CpG-22897 713 NM_031266 3182 Hs.591731 NM_004499 ENSG00000197451 HNRNPAB ABBP1|HNRPAB heterogeneous nuclear ribonucleoprotein A/B protein-coding chr1-2248 chr1 183600279 183600489 + 15.0 0.000 Intergenic Intergenic -9470 NM_001127651 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr4-1052 chr4 74531930 74532140 + 15.0 0.000 Intergenic Intergenic 86899 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr9-1171 chr9 69981851 69982061 + 15.0 0.000 Intergenic Intergenic -61625 NR_125850 256691 Hs.547172 NM_153267 ENSG00000165072 MAMDC2 - MAM domain containing 2 protein-coding chr2-1221 chr2 238948586 238948796 + 15.0 0.000 Intergenic (TCCCC)n|Simple_repeat|Simple_repeat -22422 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr1-6152 chr1 176695045 176695255 + 15.0 0.000 intron (NM_020318, intron 6 of 22) L2c|LINE|L2 231975 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr21-323 chr21 35408471 35408681 + 15.0 0.000 intron (NR_073512, intron 2 of 2) intron (NR_073512, intron 2 of 2) 172188 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr5-786 chr5 5014922 5015132 + 15.0 0.000 Intergenic Intergenic -19332 NR_026994 340094 Hs.665092 NR_026994 ENSG00000215231 LINC01020 - long intergenic non-protein coding RNA 1020 ncRNA chr2-944 chr2 239361366 239361576 + 15.0 0.000 intron (NM_006037, intron 1 of 26) intron (NM_006037, intron 1 of 26) -9667 NR_039948 100616360 NR_039948 ENSG00000264292 MIR2467 mir-2467 microRNA 2467 ncRNA chr9-1732 chr9 124331914 124332124 + 15.0 0.000 intron (NM_001166169, intron 7 of 9) intron (NM_001166169, intron 7 of 9) -21454 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr6-1188 chr6 150857694 150857904 + 15.0 0.000 Intergenic LTR47B4|LTR|ERVL -7880 NR_146719 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr17-1446 chr17 38863689 38863899 + 15.0 0.000 Intergenic AluY|SINE|Alu -6065 NM_001271608 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr9-1067 chr9 127567405 127567615 + 15.0 0.000 intron (NM_001035534, intron 1 of 13) intron (NM_001035534, intron 1 of 13) 1563 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr13-700 chr13 35768687 35768897 + 15.0 0.000 3' UTR (NM_001330072, exon 17 of 17) 3' UTR (NM_001330072, exon 17 of 17) 71065 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr6-1431 chr6 152669994 152670204 + 15.0 0.000 Intergenic Intergenic -27796 NM_025107 80177 Hs.18160 NM_025107 ENSG00000120279 MYCT1 MTLC MYC target 1 protein-coding chr7-1799 chr7 91609653 91609863 + 15.0 0.000 Intergenic Intergenic 270944 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr11-1420 chr11 47415547 47415757 + 15.0 0.000 3' UTR (NM_152264, exon 10 of 10) 3' UTR (NM_152264, exon 10 of 10) 7062 NM_001128225 91252 Hs.523664 NM_152264 ENSG00000165915 SLC39A13 EDSSPD3|LZT-Hs9|SCDEDS|ZIP13 solute carrier family 39 member 13 protein-coding chr20-1676 chr20 34220684 34220894 + 15.0 0.000 Intergenic Intergenic -39576 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr16-640 chr16 8849130 8849340 + 15.0 0.000 promoter-TSS (NR_147908) promoter-TSS (NR_147908) -234 NR_147908 100130283 Hs.735515 NR_147908 LOC100130283 - uncharacterized LOC100130283 ncRNA chr16-2082 chr16 87499189 87499399 + 15.0 0.000 intron (NR_110943, intron 1 of 3) Tigger19b|DNA|TcMar-Tigger 5107 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr2-1658 chr2 54559593 54559803 + 15.0 0.000 intron (NM_178313, intron 1 of 30) intron (NM_178313, intron 1 of 30) 1304 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr12-1434 chr12 71046376 71046586 + 15.0 0.000 Intergenic Intergenic 111328 NM_001369760 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr16-1892 chr16 86477784 86477994 + 15.0 0.000 non-coding (NR_033925, exon 3 of 4) non-coding (NR_033925, exon 3 of 4) 30971 NR_036444 400550 Hs.448825 NR_033925 ENSG00000268388 FENDRR FOXF1-AS1|FOXF1AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21 FOXF1 adjacent non-coding developmental regulatory RNA ncRNA chr12-1289 chr12 111774103 111774313 + 15.0 0.000 intron (NM_000690, intron 1 of 12) intron (NM_000690, intron 1 of 12) 7275 NM_001204889 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr1-963 chr1 1201478 1201688 + 15.0 0.000 Intergenic CpG 5009 NM_148902 8784 Hs.212680 NM_004195 ENSG00000186891 TNFRSF18 AITR|CD357|ENERGEN|GITR|GITR-D TNF receptor superfamily member 18 protein-coding chr19-2228 chr19 44626017 44626227 + 15.0 0.000 intron (NM_001205280, intron 2 of 4) intron (NM_001205280, intron 2 of 4) 12559 NM_001205280 147710 Hs.512509 NM_001205280 ENSG00000216588 IGSF23 - immunoglobulin superfamily member 23 protein-coding chr13-960 chr13 112694282 112694492 + 15.0 0.000 intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 4058 NM_032189 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr1-2688 chr1 205262247 205262457 + 15.0 0.000 intron (NM_001331034, intron 1 of 3) intron (NM_001331034, intron 1 of 3) 5155 NM_001331034 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr12-1918 chr12 92439439 92439649 + 15.0 0.000 Intergenic MIR3|SINE|MIR -6545 NR_144319 574016 Hs.551199 NM_001025232 ENSG00000205057 CLLU1OS - chronic lymphocytic leukemia up-regulated 1 opposite strand protein-coding chr10-2706 chr10 102764904 102765114 + 15.0 0.000 intron (NM_001083913, intron 1 of 3) intron (NM_001083913, intron 1 of 3) -11212 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr10-1837 chr10 32413549 32413759 + 15.0 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 32402 NR_120660 101929431 Hs.639819 NR_120660 LOC101929431 - uncharacterized LOC101929431 ncRNA chr11-1821 chr11 35348106 35348316 + 15.0 0.000 intron (NM_001195728, intron 1 of 11) intron (NM_001195728, intron 1 of 11) 71347 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr3-1392 chr3 105823517 105823727 + 15.0 0.000 intron (NR_135809, intron 3 of 18) intron (NR_135809, intron 3 of 18) 43969 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr19-1162 chr19 1828605 1828815 + 15.0 0.000 intron (NM_020695, intron 1 of 15) intron (NM_020695, intron 1 of 15) 6621 NR_152847 100288123 Hs.662426 NR_034114 ENSG00000267244 LOC100288123 - uncharacterized LOC100288123 ncRNA chrX-470 chrX 11629671 11629881 + 15.0 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) 36144 NR_109776 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr3-744 chr3 139204830 139205040 + 15.0 0.000 Intergenic Intergenic 28587 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 PISRT1 lncRNA ncRNA chr10-2044 chr10 80942596 80942806 + 15.0 0.000 Intergenic Intergenic 292904 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr6-1301 chr6 1287390 1287600 + 15.0 0.000 Intergenic Intergenic -24603 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr9-1762 chr9 132800342 132800552 + 15.0 0.000 intron (NM_001317959, intron 12 of 14) intron (NM_001317959, intron 12 of 14) -77897 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr5-1944 chr5 14149746 14149956 + 15.0 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 6509 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr5-1457 chr5 54211096 54211306 + 15.0 0.000 intron (NM_019087, intron 1 of 4) intron (NM_019087, intron 1 of 4) 99372 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr9-1812 chr9 96856928 96857138 + 15.0 0.000 Intergenic Intergenic -2519 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding chr11-1300 chr11 44955099 44955309 + 15.0 0.000 Intergenic Intergenic -3898 NM_001258321 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr9-2582 chr9 136516711 136516921 + 15.0 0.000 intron (NM_017617, intron 9 of 33) intron (NM_017617, intron 9 of 33) 2810 NR_039820 100616242 NR_039820 ENSG00000263403 MIR4673 - microRNA 4673 ncRNA chr11-3588 chr11 64536609 64536819 + 15.0 0.000 Intergenic Intergenic -19227 NM_018484 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr1-4212 chr1 119365889 119366099 + 15.0 0.000 Intergenic Intergenic -2791 NM_016527 51179 Hs.659767 NM_016527 ENSG00000116882 HAO2 GIG16|HAOX2 hydroxyacid oxidase 2 protein-coding chr22-1285 chr22 36612438 36612648 + 15.0 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) -83377 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr5-1147 chr5 151038251 151038461 + 15.0 0.000 intron (NM_001258454, intron 12 of 17) intron (NM_001258454, intron 12 of 17) 17765 NM_002084 2878 Hs.386793 NM_002084 ENSG00000211445 GPX3 GPx-P|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding chr7-1471 chr7 103297703 103297913 + 15.0 0.000 intron (NM_004279, intron 1 of 12) intron (NM_004279, intron 1 of 12) 373 NM_004279 9512 Hs.184211 NM_004279 ENSG00000105819 PMPCB Beta-MPP|MPP11|MPPB|MPPP52|P-52 peptidase, mitochondrial processing beta subunit protein-coding chr8-2971 chr8 78880163 78880373 + 15.0 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 42739 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA chr18-333 chr18 44589804 44590014 + 15.0 0.000 Intergenic Intergenic 58130 NR_131768 105667213 Hs.135737 NR_131768 LINC01601 - long intergenic non-protein coding RNA 1601 ncRNA chr2-1472 chr2 74000221 74000431 + 15.0 0.000 intron (NM_001287491, intron 2 of 11) L2c|LINE|L2 -2366 NM_001366022 200424 Hs.208546 NM_001287491 ENSG00000187605 TET3 hCG_40738 tet methylcytosine dioxygenase 3 protein-coding chr1-4653 chr1 190173199 190173409 + 15.0 0.000 intron (NM_199051, intron 6 of 7) intron (NM_199051, intron 6 of 7) 302706 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr5-1223 chr5 137146414 137146624 + 15.0 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 18322 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr17-1696 chr17 28811681 28811891 + 15.0 0.000 intron (NM_001288635, intron 1 of 3) intron (NM_001288635, intron 1 of 3) 685 NM_001288634 55731 Hs.564533 NM_018182 ENSG00000173065 FAM222B C17orf63 family with sequence similarity 222 member B protein-coding chr9-1394 chr9 95206306 95206516 + 15.0 0.000 intron (NM_001243744, intron 4 of 13) intron (NM_001243744, intron 4 of 13) 110843 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr19-2784 chr19 46065568 46065778 + 15.0 0.000 intron (NR_163177, intron 1 of 5) intron (NR_163177, intron 1 of 5) 11956 NR_163176 444882 Hs.531310 NM_001002923 ENSG00000204869 IGFL4 - IGF like family member 4 protein-coding chr22-809 chr22 38042197 38042407 + 15.0 0.000 TTS (NM_001363825) TTS (NM_001363825) -14953 NM_001039583 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr1-2754 chr1 51898231 51898441 + 15.0 0.000 Intergenic Intergenic -19399 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr3-2890 chr3 48570015 48570225 + 15.0 0.000 intron (NM_000094, intron 98 of 117) intron (NM_000094, intron 98 of 117) -6339 NM_033199 90226 Hs.631914 NM_033199 ENSG00000145040 UCN2 SRP|UCN-II|UCNI|UR|URP urocortin 2 protein-coding chr14-834 chr14 65206438 65206648 + 15.0 0.000 Intergenic Intergenic 15804 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr11-2898 chr11 61732627 61732837 + 15.0 0.000 intron (NM_006133, intron 9 of 19) intron (NM_006133, intron 9 of 19) -19904 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr16-1092 chr16 75074099 75074309 + 15.0 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 42568 NM_194436 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr2-3972 chr2 71948904 71949114 + 15.0 0.000 Intergenic Intergenic 198853 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr11-2423 chr11 13183482 13183692 + 15.0 0.000 Intergenic Intergenic -93065 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr2-3445 chr2 109396770 109396980 + 15.0 0.000 intron (NM_001099289, intron 3 of 9) intron (NM_001099289, intron 3 of 9) -83250 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr17-2911 chr17 43714595 43714805 + 15.0 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 44091 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr9-3787 chr9 126809136 126809346 + 15.0 0.000 intron (NM_014007, intron 2 of 2) MIRc|SINE|MIR 4201 NM_014007 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr17-1986 chr17 50919731 50919941 + 15.0 0.000 Intergenic Intergenic -51858 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr17-1436 chr17 7982147 7982357 + 15.0 0.000 Intergenic LTR8|LTR|ERV1 -20418 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr22-781 chr22 43209179 43209389 + 15.0 0.000 intron (NM_173050, intron 19 of 21) intron (NM_173050, intron 19 of 21) -3390 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr9-1467 chr9 82601291 82601501 + 15.0 0.000 Intergenic Intergenic 461746 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr14-1431 chr14 74275299 74275509 + 15.0 0.000 Intergenic Intergenic 27530 NM_001353603 5826 Hs.94395 NM_005050 ENSG00000119688 ABCD4 ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L ATP binding cassette subfamily D member 4 protein-coding chr4-1313 chr4 129342968 129343178 + 15.0 0.000 Intergenic Intergenic 246921 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr8-1680 chr8 47611029 47611239 + 15.0 0.000 intron (NM_001080394, intron 10 of 19) intron (NM_001080394, intron 10 of 19) -42954 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr12-1613 chr12 70661767 70661977 + 15.0 0.000 intron (NM_130846, intron 7 of 9) intron (NM_130846, intron 7 of 9) -24443 NM_001330204 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase receptor type B protein-coding chr16-1672 chr16 82192701 82192911 + 15.0 0.000 Intergenic 7SK|RNA|RNA -22582 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr20-990 chr20 54526193 54526403 + 15.0 0.000 intron (NM_018431, intron 1 of 7) intron (NM_018431, intron 1 of 7) 50705 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr2-2222 chr2 151367684 151367894 + 15.0 0.000 promoter-TSS (NR_039931) promoter-TSS (NR_039931) -545 NR_039931 100616392 NR_039931 ENSG00000264684 MIR4773-1 - microRNA 4773-1 ncRNA chr1-4401 chr1 184624015 184624225 + 15.0 0.000 3' UTR (NM_030806, exon 6 of 6) 3' UTR (NM_030806, exon 6 of 6) 130738 NR_135118 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr14-704 chr14 71594926 71595136 + 15.0 0.000 intron (NM_001354286, intron 6 of 24) intron (NM_001354286, intron 6 of 24) 8733 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr10-1651 chr10 103949656 103949866 + 15.0 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -17379 NM_001304743 9748 Hs.591922 NM_014720 ENSG00000065613 SLK LOSK|STK2|bA16H23.1|se20-9 STE20 like kinase protein-coding chr1-4572 chr1 89660607 89660817 + 15.0 0.000 intron (NM_032270, intron 1 of 2) intron (NM_032270, intron 1 of 2) 27592 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr18-618 chr18 7945956 7946166 + 15.0 0.000 intron (NM_002845, intron 5 of 30) intron (NM_002845, intron 5 of 30) 378745 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr3-2348 chr3 148076194 148076404 + 15.0 0.000 Intergenic Intergenic -1860 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr13-259 chr13 52406100 52406310 + 15.0 0.000 promoter-TSS (NM_199263) promoter-TSS (NM_199263) -33 NM_018676 55901 Hs.325667 NM_018676 ENSG00000136114 THSD1 TMTSP|UNQ3010 thrombospondin type 1 domain containing 1 protein-coding chr7-2095 chr7 3761896 3762106 + 15.0 0.000 intron (NM_152744, intron 4 of 44) intron (NM_152744, intron 4 of 44) -367684 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr3-4208 chr3 133609982 133610192 + 15.0 0.000 intron (NM_001363889, intron 25 of 27) Charlie4a|DNA|hAT-Charlie 35653 NM_001282765 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr1-2265 chr1 208108000 208108210 + 15.0 0.000 intron (NM_025179, intron 4 of 31) intron (NM_025179, intron 4 of 31) 136279 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr18-361 chr18 8685733 8685943 + 15.0 0.000 Intergenic L2c|LINE|L2 21783 NR_120598 100287082 Hs.439434 NR_120598 ENSG00000265962 GACAT2 MTCL1-AS1|MTCL1AS1 gastric cancer associated transcript 2 ncRNA chr6-1159 chr6 17580538 17580748 + 15.0 0.000 Intergenic LTR12C|LTR|ERV1 -19659 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr7-1482 chr7 128360018 128360228 + 15.0 0.000 intron (NM_001114726, intron 1 of 5) intron (NM_001114726, intron 1 of 5) 1562 NM_001174164 401399 Hs.381096 NM_001114726 ENSG00000224940 PRRT4 - proline rich transmembrane protein 4 protein-coding chr7-3170 chr7 96508415 96508625 + 15.0 0.000 intron (NR_163953, intron 2 of 5) MIRc|SINE|MIR -4997 NM_001201450 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr2-1637 chr2 20411554 20411764 + 15.0 0.000 Intergenic L1M2a|LINE|L1 -35415 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr4-953 chr4 772899 773109 + 15.0 0.000 Intergenic Intergenic 8844 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA GL000194.1-2 GL000194.1 69562 69772 + 15.0 0.000 NA NA NA NA chr1-7537 chr1 177645526 177645736 + 15.0 0.000 Intergenic Intergenic -54893 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr1-6228 chr1 219941283 219941493 + 15.0 0.000 Intergenic Intergenic -12737 NM_018713 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr2-1651 chr2 45470722 45470932 + 15.0 0.000 intron (NM_018079, intron 16 of 20) intron (NM_018079, intron 16 of 20) 140440 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr1-2785 chr1 200302726 200302936 + 15.0 0.000 Intergenic Intergenic 70961 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr10-1395 chr10 74333290 74333500 + 15.0 0.000 intron (NM_001369124, intron 4 of 9) intron (NM_001369124, intron 4 of 9) 156632 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr12-1354 chr12 25692201 25692411 + 15.0 0.000 Intergenic Intergenic -43728 NM_001352234 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr12-2016 chr12 42090979 42091189 + 15.0 0.000 intron (NM_173601, intron 7 of 7) intron (NM_173601, intron 7 of 7) 53790 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr4-834 chr4 7842583 7842793 + 15.0 0.000 intron (NM_198595, intron 5 of 16) (A)n|Simple_repeat|Simple_repeat 29620 NM_001371090 chr1-1725 chr1 52033033 52033243 + 15.0 0.000 non-coding (NR_046405, exon 3 of 3) non-coding (NR_046405, exon 3 of 3) 672 NM_138417 112970 Hs.476033 NM_138417 ENSG00000198841 KTI12 SBBI81|TOT4 KTI12 chromatin associated homolog protein-coding chr1-3010 chr1 221829873 221830083 + 15.0 0.000 intron (NR_125989, intron 3 of 3) MER5B|DNA|hAT-Charlie 10688 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr20-969 chr20 44065327 44065537 + 15.0 0.000 intron (NM_001098797, intron 6 of 8) intron (NM_001098797, intron 6 of 8) 119536 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr2-2434 chr2 44398182 44398392 + 15.0 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 36340 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr2-1175 chr2 19901762 19901972 + 15.0 0.000 5' UTR (NM_001008237, exon 1 of 3) 5' UTR (NM_001008237, exon 1 of 3) 116 NM_001008237 130502 Hs.591547 NM_001008237 ENSG00000183891 TTC32 - tetratricopeptide repeat domain 32 protein-coding chr12-2623 chr12 124863120 124863330 + 15.0 0.000 intron (NR_160424, intron 1 of 11) intron (NR_160424, intron 1 of 11) 639 NR_160420 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr13-1709 chr13 93092934 93093144 + 15.0 0.000 Intergenic SATR1|Satellite|Satellite 47698 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA chr15-537 chr15 75029494 75029704 + 15.0 0.000 intron (NM_001301103, intron 2 of 3) intron (NM_001301103, intron 2 of 3) 6009 NM_001301101 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chrX-185 chrX 47193634 47193844 + 15.0 0.000 promoter-TSS (NM_003334) promoter-TSS (NM_003334) -90 NM_003334 7317 Hs.533273 NM_003334 ENSG00000130985 UBA1 A1S9|A1S9T|A1ST|AMCX1|CFAP124|GXP1|POC20|SMAX2|UBA1A|UBE1|UBE1X ubiquitin like modifier activating enzyme 1 protein-coding chr11-3889 chr11 104191208 104191418 + 15.0 0.000 Intergenic Intergenic -27166 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr21-246 chr21 35873572 35873782 + 15.0 0.000 Intergenic Intergenic -12768 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr3-1918 chr3 178078844 178079054 + 15.0 0.000 Intergenic Intergenic 262084 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr3-530 chr3 195492505 195492715 + 15.0 0.000 Intergenic Intergenic -49590 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr16-2189 chr16 72842342 72842552 + 15.0 0.000 intron (NM_001164766, intron 3 of 8) intron (NM_001164766, intron 3 of 8) -177477 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr3-1053 chr3 9317137 9317347 + 15.0 0.000 Intergenic Intergenic -45812 NM_001114092 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding chr1-2292 chr1 20367090 20367300 + 15.0 0.000 intron (NR_033887, intron 10 of 11) intron (NR_033887, intron 10 of 11) 61599 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr19-1093 chr19 45439784 45439994 + 15.0 0.000 intron (NM_001369412, intron 1 of 9) CpG 3235 NR_106736 102464836 NR_106736 ENSG00000275726 MIR6088 hsa-mir-6088 microRNA 6088 ncRNA chr9-2176 chr9 130413246 130413456 + 15.0 0.000 intron (NM_001291815, intron 85 of 97) L1M4|LINE|L1 -31356 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr1-1606 chr1 83860484 83860694 + 15.0 0.000 promoter-TSS (NR_119374) promoter-TSS (NR_119374) -43 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr2-2002 chr2 62474113 62474323 + 15.0 0.000 Intergenic Intergenic 31977 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr16-1430 chr16 50301767 50301977 + 15.0 0.000 intron (NM_001114, intron 10 of 25) intron (NM_001114, intron 10 of 25) 9256 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chr2-1523 chr2 85549850 85550060 + 15.0 0.000 exon (NM_000821, exon 15 of 15) exon (NM_000821, exon 15 of 15) 10787 NM_005911 4144 Hs.516157 NM_005911 ENSG00000168906 MAT2A MATA2|MATII|SAMS2 methionine adenosyltransferase 2A protein-coding chr20-553 chr20 31722819 31723029 + 15.0 0.000 promoter-TSS (NM_001191) promoter-TSS (NM_001191) -56 NM_001317919 598 Hs.516966 NM_001191 ENSG00000171552 BCL2L1 BCL-XL/S|BCL2L|BCLX|Bcl-X|PPP1R52 BCL2 like 1 protein-coding chr12-1386 chr12 95516940 95517150 + 15.0 0.000 non-coding (NR_144948, exon 5 of 5) non-coding (NR_144948, exon 5 of 5) 31193 NM_001278393 84101 Hs.646421 NM_032147 ENSG00000136014 USP44 - ubiquitin specific peptidase 44 protein-coding chr21-627 chr21 42962563 42962773 + 15.0 0.000 Intergenic Intergenic -11654 NR_049889 100847013 NR_049889 ENSG00000264580 MIR5692B - microRNA 5692b ncRNA chr12-957 chr12 109879617 109879827 + 15.0 0.000 intron (NM_016433, intron 1 of 4) intron (NM_016433, intron 1 of 4) 819 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr12-1949 chr12 108723039 108723249 + 15.0 0.000 intron (NM_014325, intron 1 of 10) intron (NM_014325, intron 1 of 10) 7699 NM_001276471 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr15-174 chr15 64703110 64703320 + 15.0 0.000 promoter-TSS (NM_002537) promoter-TSS (NM_002537) 66 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr11-636 chr11 61161465 61161675 + 15.0 0.000 promoter-TSS (NM_017966) promoter-TSS (NM_017966) -144 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr16-776 chr16 648953 649163 + 15.0 0.000 promoter-TSS (NM_145294) promoter-TSS (NM_145294) 255 NR_135177 105371038 NR_135177 LOC105371038 - uncharacterized LOC105371038 ncRNA chr6-335 chr6 42746921 42747131 + 15.0 0.000 promoter-TSS (NM_003192) promoter-TSS (NM_003192) 39 NM_001318819 23506 Hs.658033 NM_015349 ENSG00000112624 BICRAL GLTSCR1L|KIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding chr16-1077 chr16 56871330 56871540 + 15.0 0.000 intron (NM_001126108, intron 6 of 25) intron (NM_001126108, intron 6 of 25) 6228 NM_000339 6559 Hs.669115 NM_000339 ENSG00000070915 SLC12A3 NCC|NCCT|TSC solute carrier family 12 member 3 protein-coding chr10-1386 chr10 57696808 57697018 + 15.0 0.000 Intergenic Intergenic -392354 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr13-1502 chr13 113843811 113844021 + 15.0 0.000 intron (NM_000820, intron 4 of 14) intron (NM_000820, intron 4 of 14) 20160 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr4-593 chr4 109433575 109433785 + 15.0 0.000 promoter-TSS (NM_001318085) promoter-TSS (NM_001318085) -35 NM_001318085 10427 Hs.292472 NM_006323 ENSG00000138802 SEC24B SEC24 SEC24 homolog B, COPII coat complex component protein-coding chr14-1870 chr14 77042282 77042492 + 15.0 0.000 intron (NR_110554, intron 1 of 3) intron (NR_110554, intron 1 of 3) 1338 NR_110554 283575 Hs.651736 NR_110554 ENSG00000246548 LINC02288 - long intergenic non-protein coding RNA 2288 ncRNA chr17-1670 chr17 81392136 81392346 + 15.0 0.000 Intergenic Intergenic -6859 NM_001272086 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr19-2777 chr19 45062224 45062434 + 15.0 0.000 intron (NR_103529, intron 11 of 20) intron (NR_103529, intron 11 of 20) -13298 NM_001319055 79760 Hs.466919 NM_024707 ENSG00000142252 GEMIN7 SIP3 gem nuclear organelle associated protein 7 protein-coding chr10-2455 chr10 16944417 16944627 + 15.0 0.000 intron (NM_001081, intron 36 of 66) intron (NM_001081, intron 36 of 66) -127068 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr14-575 chr14 89137596 89137806 + 15.0 0.000 Intergenic Intergenic 279532 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr9-2974 chr9 22040984 22041194 + 15.0 0.000 intron (NR_003529, intron 3 of 18) intron (NR_003529, intron 3 of 18) -31776 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr3-1558 chr3 11279006 11279216 + 15.0 0.000 intron (NM_001136031, intron 1 of 17) intron (NM_001136031, intron 1 of 17) 6714 NM_001349232 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr15-718 chr15 52643050 52643260 + 15.0 0.000 intron (NM_019600, intron 2 of 12) intron (NM_019600, intron 2 of 12) 8885 NM_001286495 56204 Hs.152385 NM_019600 ENSG00000047346 FAM214A KIAA1370 family with sequence similarity 214 member A protein-coding chr14-220 chr14 31420510 31420720 + 15.0 0.000 promoter-TSS (NR_110045) promoter-TSS (NR_110045) -65 NM_015473 25938 Hs.744979 NM_015473 ENSG00000129493 HEATR5A C14orf125 HEAT repeat containing 5A protein-coding chr3-1674 chr3 186097899 186098109 + 15.0 0.000 intron (NM_004454, intron 5 of 12) intron (NM_004454, intron 5 of 12) 11085 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr2-1453 chr2 11830206 11830416 + 15.0 0.000 Intergenic Intergenic 6675 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA chr11-2484 chr11 65077409 65077619 + 15.0 0.000 TTS (NM_080668) TTS (NM_080668) 6526 NM_080668 113130 Hs.434886 NM_080668 ENSG00000146670 CDCA5 SORORIN cell division cycle associated 5 protein-coding chr14-982 chr14 76876091 76876301 + 15.0 0.000 Intergenic Intergenic 49788 NM_194287 145497 Hs.147276 NM_194287 ENSG00000100565 LRRC74A C14orf166B|LRRC74 leucine rich repeat containing 74A protein-coding chr11-1805 chr11 126115971 126116181 + 15.0 0.000 Intergenic Intergenic -52784 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr1-1576 chr1 21869778 21869988 + 15.0 0.000 intron (NM_005529, intron 33 of 96) intron (NM_005529, intron 33 of 96) 57618 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr2-2341 chr2 189899021 189899231 + 15.0 0.000 Intergenic L2b|LINE|L2 114676 NM_001321045 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr1-6169 chr1 186763253 186763463 + 15.0 0.000 Intergenic Intergenic -65542 NM_024420 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr1-3828 chr1 24601327 24601537 + 15.0 0.000 intron (NM_001010980, intron 3 of 3) intron (NM_001010980, intron 3 of 3) -41870 NM_001366588 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr2-3694 chr2 216189552 216189762 + 15.0 0.000 intron (NM_021141, intron 16 of 20) intron (NM_021141, intron 16 of 20) -27232 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA chr2-2937 chr2 9578414 9578624 + 15.0 0.000 Intergenic Intergenic -22689 NM_003183 6868 Hs.404914 NM_003183 ENSG00000151694 ADAM17 ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE ADAM metallopeptidase domain 17 protein-coding chr8-1473 chr8 25168500 25168710 + 15.0 0.000 Intergenic Intergenic -16084 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr12-1329 chr12 69097963 69098173 + 15.0 0.000 Intergenic L2|LINE|L2 -134828 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr17-2098 chr17 81904752 81904962 + 15.0 0.000 exon (NM_001256435, exon 13 of 13) exon (NM_001256435, exon 13 of 13) 2619 NM_148896 256933 Hs.569843 NM_148896 ENSG00000183979 NPB L7|PPL7|PPNPB neuropeptide B protein-coding chr17-1381 chr17 82106315 82106525 + 15.0 0.000 intron (NM_001367828, intron 16 of 16) intron (NM_001367828, intron 16 of 16) -8184 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr13-783 chr13 45196775 45196985 + 15.0 0.000 intron (NM_198404, intron 1 of 1) intron (NM_198404, intron 1 of 1) 4165 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr1-2269 chr1 220879377 220879587 + 15.0 0.000 promoter-TSS (NM_021958) promoter-TSS (NM_021958) 39 NM_021958 3142 Hs.74870 NM_021958 ENSG00000136630 HLX HB24|HLX1 H2.0 like homeobox protein-coding chr13-675 chr13 112942733 112942943 + 15.0 0.000 Intergenic Intergenic 25800 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr4-3109 chr4 158315969 158316179 + 15.0 0.000 Intergenic Intergenic 105588 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr1-2514 chr1 219465193 219465403 + 15.0 0.000 intron (NR_135822, intron 2 of 3) intron (NR_135822, intron 2 of 3) 92026 NR_135822 102723886 Hs.525963 NR_135822 LYPLAL1-AS1 - LYPLAL1 antisense RNA 1 ncRNA chr14-418 chr14 67526816 67527026 + 15.0 0.000 intron (NM_001348546, intron 1 of 2) intron (NM_001348546, intron 1 of 2) -6369 NM_020715 57475 Hs.594236 NM_020715 ENSG00000054690 PLEKHH1 - pleckstrin homology, MyTH4 and FERM domain containing H1 protein-coding chr13-726 chr13 83449847 83450057 + 15.0 0.000 Intergenic Intergenic 432441 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr3-2223 chr3 36525484 36525694 + 15.0 0.000 intron (NM_001292049, intron 6 of 8) intron (NM_001292049, intron 6 of 8) 145102 NM_003149 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr15-544 chr15 34367586 34367796 + 15.0 0.000 promoter-TSS (NM_153613) promoter-TSS (NM_153613) -495 NM_153613 254531 Hs.352614 NM_153613 ENSG00000176454 LPCAT4 AGPAT7|AYTL3|LPAAT-eta|LPEAT2 lysophosphatidylcholine acyltransferase 4 protein-coding chr8-771 chr8 25195566 25195776 + 15.0 0.000 intron (NM_024940, intron 1 of 51) L2b|LINE|L2 10982 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr6-2032 chr6 53962053 53962263 + 15.0 0.000 intron (NR_125842, intron 1 of 3) intron (NR_125842, intron 1 of 3) 32176 NR_125842 101927189 Hs.453592 NR_125842 ENSG00000236740 LOC101927189 - uncharacterized LOC101927189 ncRNA chr9-1868 chr9 76835775 76835985 + 15.0 0.000 intron (NM_001308048, intron 4 of 17) intron (NM_001308048, intron 4 of 17) 70207 NR_131751 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr10-548 chr10 70458383 70458593 + 15.0 0.000 Intergenic CpG -10540 NM_001329906 4838 Hs.370414 NM_018055 ENSG00000156574 NODAL HTX5 nodal growth differentiation factor protein-coding chr9-1065 chr9 124832686 124832896 + 15.0 0.000 Intergenic Intergenic -20626 NM_001276376 401551 Hs.343383 NM_001045476 ENSG00000136918 WDR38 - WD repeat domain 38 protein-coding chr16-935 chr16 46621316 46621526 + 15.0 0.000 promoter-TSS (NM_024745) promoter-TSS (NM_024745) -42 NM_001324319 79801 Hs.123253 NM_024745 ENSG00000171241 SHCBP1 PAL SHC binding and spindle associated 1 protein-coding chr2-1953 chr2 233711467 233711677 + 15.0 0.000 intron (NM_205862, intron 2 of 5) intron (NM_205862, intron 2 of 5) -1420 NM_019078 54579 Hs.554822 NM_019078 ENSG00000240224 UGT1A5 UDPGT|UDPGT 1-5|UGT1E UDP glucuronosyltransferase family 1 member A5 protein-coding chr1-1975 chr1 185244511 185244721 + 15.0 0.000 intron (NM_017673, intron 16 of 18) Tigger3b|DNA|TcMar-Tigger 72627 NM_006469 10625 Hs.497183 NM_006469 ENSG00000116679 IVNS1ABP ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP influenza virus NS1A binding protein protein-coding chr6-691 chr6 22668383 22668593 + 15.0 0.000 intron (NR_134614, intron 1 of 2) intron (NR_134614, intron 1 of 2) 49436 NR_134613 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr16-1396 chr16 86509654 86509864 + 15.0 0.000 promoter-TSS (NR_033925) promoter-TSS (NR_033925) -768 NM_001451 2294 Hs.155591 NM_001451 ENSG00000103241 FOXF1 ACDMPV|FKHL5|FREAC1 forkhead box F1 protein-coding chr2-2114 chr2 29015108 29015318 + 15.0 0.000 intron (NM_001321539, intron 8 of 15) intron (NM_001321539, intron 8 of 15) 33915 NM_199280 165186 Hs.525977 NM_199280 ENSG00000189350 TOGARAM2 FAM179A TOG array regulator of axonemal microtubules 2 protein-coding chr1-1140 chr1 224183024 224183234 + 15.0 0.000 promoter-TSS (NM_001321541) promoter-TSS (NM_001321541) -111 NM_003676 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|HLD18|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr15-729 chr15 70327963 70328173 + 15.0 0.000 Intergenic Intergenic 177860 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr14-634 chr14 60981232 60981442 + 15.0 0.000 promoter-TSS (NM_001350254) promoter-TSS (NM_001350254) 92 NR_033344 145389 Hs.200738 NM_153811 ENSG00000139974 SLC38A6 NAT-1|SNAT6 solute carrier family 38 member 6 protein-coding chr12-915 chr12 25769173 25769383 + 15.0 0.000 Intergenic Intergenic 104801 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr15-426 chr15 70856724 70856934 + 15.0 0.000 intron (NM_001284357, intron 1 of 16) intron (NM_001284357, intron 1 of 16) -2672 NM_197958 55323 Hs.416755 NM_018357 ENSG00000166173 LARP6 ACHN La ribonucleoprotein domain family member 6 protein-coding chr6-2355 chr6 132466949 132467159 + 15.0 0.000 intron (NR_137169, intron 7 of 8) L2a|LINE|L2 45729 NM_001326578 8417 Hs.593148 NM_003569 ENSG00000079950 STX7 - syntaxin 7 protein-coding chr7-2121 chr7 28517790 28518000 + 15.0 0.000 intron (NM_182899, intron 3 of 9) intron (NM_182899, intron 3 of 9) 82280 NM_004904 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr10-1307 chr10 69383611 69383821 + 15.0 0.000 intron (NM_033496, intron 10 of 17) MLT1H|LTR|ERVL-MaLR 33202 NM_001057 6865 Hs.88372 NM_001057 ENSG00000075073 TACR2 NK2R|NKNAR|SKR|TAC2R tachykinin receptor 2 protein-coding chr18-129 chr18 12407802 12408012 + 15.0 0.000 promoter-TSS (NM_006553) promoter-TSS (NM_006553) -22 NM_001142405 10650 Hs.514718 NM_006553 ENSG00000141391 PRELID3A C18orf43|HFL-EDDG1|SLMO1 PRELI domain containing 3A protein-coding chr2-1002 chr2 201831538 201831748 + 15.0 0.000 intron (NM_001366386, intron 6 of 13) intron (NM_001366386, intron 6 of 13) 25064 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr11-2188 chr11 10550702 10550912 + 15.0 0.000 intron (NR_034094, intron 1 of 2) intron (NR_034094, intron 1 of 2) 9571 NR_046374 100129827 Hs.246769 NR_034093 ENSG00000177112 MRVI1-AS1 - MRVI1 antisense RNA 1 ncRNA chr22-955 chr22 38257191 38257401 + 15.0 0.000 intron (NM_001195072, intron 1 of 9) Charlie7|DNA|hAT-Charlie 15368 NM_001195071 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr20-676 chr20 36606521 36606731 + 15.0 0.000 intron (NR_026562, intron 1 of 4) intron (NR_026562, intron 1 of 4) 847 NM_199483 55969 Hs.584985 NM_018840 ENSG00000101084 RAB5IF C20orf24|PNAS-11|RIP5 RAB5 interacting factor protein-coding chr17-1965 chr17 9273600 9273810 + 15.0 0.000 intron (NM_004853, intron 7 of 7) intron (NM_004853, intron 7 of 7) -94587 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr4-2964 chr4 110534035 110534245 + 15.0 0.000 intron (NM_001977, intron 11 of 19) intron (NM_001977, intron 11 of 19) 57985 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr18-769 chr18 21509088 21509298 + 15.0 0.000 intron (NM_001142966, intron 27 of 32) intron (NM_001142966, intron 27 of 32) 91511 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding chr17-1576 chr17 39463214 39463424 + 15.0 0.000 intron (NM_015083, intron 1 of 13) intron (NM_015083, intron 1 of 13) 1833 NM_015083 51755 Hs.345028 NM_015083 ENSG00000167258 CDK12 CRK7|CRKR|CRKRS cyclin dependent kinase 12 protein-coding chr1-3700 chr1 196608541 196608751 + 15.0 0.000 promoter-TSS (NM_198503) promoter-TSS (NM_198503) -206 NR_146057 343450 Hs.657046 NM_198503 ENSG00000162687 KCNT2 EIEE57|KCa4.2|SLICK|SLO2.1 potassium sodium-activated channel subfamily T member 2 protein-coding chr22-1345 chr22 22074752 22074962 + 15.0 0.000 Intergenic Intergenic -30923 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr11-1801 chr11 120306570 120306780 + 15.0 0.000 intron (NM_001244682, intron 8 of 12) intron (NM_001244682, intron 8 of 12) -18624 NM_001198673 219902 Hs.643516 NM_174926 ENSG00000181264 TLCD5 TMEM136 TLC domain containing 5 protein-coding chr5-1554 chr5 68319299 68319509 + 15.0 0.000 Intergenic Intergenic 26827 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr1-2108 chr1 161045613 161045823 + 15.0 0.000 promoter-TSS (NM_001276373) promoter-TSS (NM_001276373) 259 NM_007122 7391 Hs.414880 NM_007122 ENSG00000158773 USF1 FCHL|FCHL1|HYPLIP1|MLTF|MLTFI|UEF|bHLHb11 upstream transcription factor 1 protein-coding chr10-1137 chr10 29949522 29949732 + 15.0 0.000 Intergenic Intergenic 109959 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr6-1092 chr6 73310138 73310348 + 15.0 0.000 promoter-TSS (NM_001251874) promoter-TSS (NM_001251874) -84 NM_001251874 80759 Hs.433062 NM_030568 ENSG00000135314 KHDC1 C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4 KH domain containing 1 protein-coding chr1-2016 chr1 96388977 96389187 + 15.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -14957 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr3-862 chr3 122794966 122795176 + 15.0 0.000 promoter-TSS (NM_032839) promoter-TSS (NM_032839) 2 NM_032839 84925 Hs.477346 NM_032839 ENSG00000138463 SLC49A4 DIRC2|RCC4 solute carrier family 49 member 4 protein-coding chrX-323 chrX 155216931 155217141 + 15.0 0.000 intron (NM_001303545, intron 1 of 5) intron (NM_001303545, intron 1 of 5) 576 NM_003372 7411 Hs.436803 NM_003372 ENSG00000155959 VBP1 HIBBJ46|PFD3|PFDN3|VBP-1 VHL binding protein 1 protein-coding chr20-685 chr20 63313260 63313470 + 15.0 0.000 intron (NM_020882, intron 17 of 35) intron (NM_020882, intron 17 of 35) 20179 NM_020882 57642 Hs.271285 NM_020882 ENSG00000101203 COL20A1 - collagen type XX alpha 1 chain protein-coding chr17-2809 chr17 9522195 9522405 + 15.0 0.000 intron (NR_033656, intron 2 of 5) intron (NR_033656, intron 2 of 5) 53520 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr7-1592 chr7 128392556 128392766 + 15.0 0.000 TTS (NR_148338) TTS (NR_148338) 5979 NR_148338 107986845 Hs.592261 NR_148338 LOC107986845 - uncharacterized LOC107986845 ncRNA chrX-613 chrX 154404610 154404820 + 15.0 0.000 intron (NM_001009932, intron 6 of 9) intron (NM_001009932, intron 6 of 9) 4434 NR_000011 26778 Hs.534404 NR_000011 ENSG00000207165 SNORA70 DXS648E|RNU70|U70 small nucleolar RNA, H/ACA box 70 snoRNA chr12-2615 chr12 123516248 123516458 + 15.0 0.000 intron (NM_178314, intron 2 of 6) LTR16A2|LTR|ERVL 3873 NM_001319244 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr18-400 chr18 14189065 14189275 + 15.0 0.000 intron (NR_040113, intron 4 of 15) intron (NR_040113, intron 4 of 15) 10073 NR_040113 440482 Hs.632352 NM_001029999 ANKRD20A5P ANKRD20A5 ankyrin repeat domain 20 family member A5, pseudogene pseudo chr19-1341 chr19 15555810 15556020 + 15.0 0.000 Intergenic Intergenic 47390 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr19-1804 chr19 1192422 1192632 + 15.0 0.000 Intergenic Intergenic -13272 NM_000455 6794 Hs.515005 NM_000455 ENSG00000118046 STK11 LKB1|PJS|hLKB1 serine/threonine kinase 11 protein-coding chr5-1515 chr5 142982114 142982324 + 15.0 0.000 intron (NR_146198, intron 11 of 22) intron (NR_146198, intron 11 of 22) -113309 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr13-858 chr13 110704924 110705134 + 15.0 0.000 intron (NM_024537, intron 2 of 14) MIRb|SINE|MIR 1087 NM_024537 79587 Hs.508725 NM_024537 ENSG00000134905 CARS2 COXPD27|cysRS cysteinyl-tRNA synthetase 2, mitochondrial protein-coding chr18-465 chr18 39648116 39648326 + 15.0 0.000 intron (NR_024391, intron 2 of 3) L1ME1|LINE|L1 -26046 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr15-486 chr15 35545949 35546159 + 15.0 0.000 promoter-TSS (NR_038251) promoter-TSS (NR_038251) 111 NM_080650 89978 Hs.107196 NM_080650 ENSG00000134146 DPH6 ATPBD4 diphthamine biosynthesis 6 protein-coding chr10-2140 chr10 58414495 58414705 + 15.0 0.000 Intergenic Intergenic 29190 NM_003201 7019 Hs.594250 NM_003201 ENSG00000108064 TFAM MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 transcription factor A, mitochondrial protein-coding chr17-1426 chr17 2412768 2412978 + 15.0 0.000 intron (NR_028335, intron 2 of 2) intron (NR_028335, intron 2 of 2) 2563 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr8-2506 chr8 19654242 19654452 + 15.0 0.000 intron (NR_148898, intron 1 of 9) intron (NR_148898, intron 1 of 9) 28236 NM_018371 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr7-862 chr7 74455296 74455506 + 15.0 0.000 intron (NM_016328, intron 1 of 26) intron (NM_016328, intron 1 of 26) 1495 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr3-2725 chr3 111691380 111691590 + 15.0 0.000 intron (NM_001185106, intron 1 of 4) intron (NM_001185106, intron 1 of 4) -14052 NR_046733 100874115 Hs.626740 NR_046733 PLCXD2-AS1 - PLCXD2 antisense RNA 1 ncRNA chr5-1121 chr5 58259861 58260071 + 15.0 0.000 Intergenic Intergenic -137625 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr1-2225 chr1 155942684 155942894 + 15.0 0.000 TTS (NM_181885) TTS (NM_181885) 1100 NM_181885 339403 Hs.449914 NM_181885 ENSG00000173080 RXFP4 GPCR142|GPR100|RLN3R2|RXFPR4 relaxin family peptide/INSL5 receptor 4 protein-coding chr17-1032 chr17 56629898 56630108 + 15.0 0.000 Intergenic Intergenic 36304 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr12-2473 chr12 62332703 62332913 + 15.0 0.000 intron (NR_147082, intron 6 of 21) intron (NR_147082, intron 6 of 21) 72404 NM_001351161 9958 Hs.434951 NM_006313 ENSG00000135655 USP15 UNPH-2|UNPH4 ubiquitin specific peptidase 15 protein-coding chr12-616 chr12 113335110 113335320 + 15.0 0.000 promoter-TSS (NM_024959) promoter-TSS (NM_024959) -47 NM_024959 80024 Hs.286194 NM_024959 ENSG00000089060 SLC8B1 NCKX6|NCLX|SLC24A6 solute carrier family 8 member B1 protein-coding chr2-2533 chr2 196284868 196285078 + 15.0 0.000 intron (NM_020760, intron 14 of 28) intron (NM_020760, intron 14 of 28) 24949 NR_110226 101927482 Hs.191841 NR_110225 HECW2-AS1 - HECW2 antisense RNA 1 ncRNA chr20-1321 chr20 63027778 63027988 + 15.0 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 9145 NR_028295 100144596 Hs.187773 NM_022099 LINC00029 C20orf51|NCRNA00029 long intergenic non-protein coding RNA 29 ncRNA chr9-2352 chr9 87713812 87714022 + 15.0 0.000 Intergenic Intergenic -12202 NM_001912 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr4-974 chr4 76087094 76087304 + 15.0 0.000 intron (NM_001130017, intron 3 of 9) intron (NM_001130017, intron 3 of 9) 12504 NM_001179 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr10-1328 chr10 92435037 92435247 + 15.0 0.000 Intergenic Intergenic 16481 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - microtubule affinity regulating kinase 2 pseudogene 9 pseudo chr6-279 chr6 2245544 2245754 + 15.0 0.000 promoter-TSS (NM_001500) promoter-TSS (NM_001500) -44 NM_001500 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr2-1329 chr2 84898408 84898618 + 15.0 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -7143 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr5-3132 chr5 58707501 58707711 + 15.0 0.000 intron (NM_138453, intron 2 of 4) MIR|SINE|MIR 124531 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr17-1515 chr17 50218861 50219071 + 15.0 0.000 Intergenic AluJb|SINE|Alu 4272 NR_110806 101927230 Hs.514326 NR_110806 LINC01969 - long intergenic non-protein coding RNA 1969 ncRNA chr12-1034 chr12 57546572 57546782 + 15.0 0.000 5' UTR (NM_001348065, exon 1 of 14) 5' UTR (NM_001348065, exon 1 of 14) 182 NM_001348065 10540 Hs.289123 NM_006400 ENSG00000175203 DCTN2 DCTN50|DYNAMITIN|HEL-S-77|RBP50 dynactin subunit 2 protein-coding chr20-468 chr20 39849837 39850047 + 15.0 0.000 Intergenic Intergenic -154519 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr6-2686 chr6 22364353 22364563 + 15.0 0.000 Intergenic Intergenic -61623 NM_001163558 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr6-1113 chr6 125099632 125099842 + 15.0 0.000 Intergenic CpG -54036 NM_003287 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr14-638 chr14 73426817 73427027 + 15.0 0.000 intron (NM_001005743, intron 1 of 12) AluJb|SINE|Alu 31658 NM_001005744 8650 Hs.525443 NM_003744 ENSG00000133961 NUMB C14orf41|S171|c14_5527 NUMB endocytic adaptor protein protein-coding chr9-1254 chr9 87607022 87607232 + 15.0 0.000 intron (NM_004938, intron 3 of 25) intron (NM_004938, intron 3 of 25) 53673 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr6-693 chr6 33672906 33673116 + 15.0 0.000 intron (NM_002224, intron 22 of 57) intron (NM_002224, intron 22 of 57) -25117 NR_037498 100500873 NR_037498 ENSG00000266509 MIR3934 - microRNA 3934 ncRNA chr3-3775 chr3 12658727 12658937 + 15.0 0.000 intron (NM_001354691, intron 1 of 16) intron (NM_001354691, intron 1 of 16) 4676 NM_001354690 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr19-1370 chr19 1360940 1361150 + 15.0 0.000 intron (NR_024247, intron 6 of 14) intron (NR_024247, intron 6 of 14) 3626 NM_001369792 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr16-1100 chr16 85541947 85542157 + 15.0 0.000 Intergenic Intergenic -69357 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr11-534 chr11 66587984 66588194 + 15.0 0.000 Intergenic SVA_F|Retroposon|SVA 4974 NM_018219 55231 Hs.121072 NM_018219 ENSG00000182791 CCDC87 - coiled-coil domain containing 87 protein-coding chr11-1723 chr11 95092933 95093143 + 15.0 0.000 intron (NM_015036, intron 1 of 1) intron (NM_015036, intron 1 of 1) 3192 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding chr8-1633 chr8 98207979 98208189 + 15.0 0.000 intron (NR_135747, intron 7 of 11) L1ME4a|LINE|L1 86151 NM_024759 79815 Hs.309489 NM_024759 ENSG00000104361 NIPAL2 NPAL2 NIPA like domain containing 2 protein-coding chr15-2693 chr15 83323465 83323675 + 15.0 0.000 Intergenic Intergenic -38906 NM_001717 646 Hs.459153 NM_001717 ENSG00000169594 BNC1 BNC|BSN1|HsT19447 basonuclin 1 protein-coding chrX-1201 chrX 70970423 70970633 + 15.0 0.000 Intergenic LTR8A|LTR|ERV1 -39432 NM_032803 84889 Hs.175220 NM_032803 ENSG00000165349 SLC7A3 ATRC3|CAT-3|CAT3 solute carrier family 7 member 3 protein-coding chr7-1185 chr7 43648283 43648493 + 15.0 0.000 intron (NM_018224, intron 2 of 5) intron (NM_018224, intron 2 of 5) 65280 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr22-952 chr22 29772264 29772474 + 15.0 0.000 Intergenic Intergenic 5000 NM_001003684 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding chr2-1013 chr2 238597123 238597333 + 15.0 0.000 Intergenic Intergenic -41729 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr12-2908 chr12 53054259 53054469 + 15.0 0.000 promoter-TSS (NR_033854) promoter-TSS (NR_033854) 74 NR_033854 283335 Hs.657060 NR_033854 ENSG00000257337 LOC283335 - uncharacterized LOC283335 ncRNA chr8-1096 chr8 26772682 26772892 + 15.0 0.000 intron (NM_033302, intron 1 of 2) intron (NM_033302, intron 1 of 2) 92868 NR_136343 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr2-5522 chr2 151362067 151362277 + 15.0 0.000 intron (NM_007115, intron 1 of 5) intron (NM_007115, intron 1 of 5) 4580 NM_007115 7130 Hs.437322 NM_007115 ENSG00000123610 TNFAIP6 TSG-6|TSG6 TNF alpha induced protein 6 protein-coding chr19-2058 chr19 7645227 7645437 + 15.0 0.000 intron (NR_073560, intron 15 of 18) intron (NR_073560, intron 15 of 18) 8222 NM_001272034 6813 Hs.515104 NM_006949 ENSG00000076944 STXBP2 FHL5|Hunc18b|MUNC18-2|UNC18-2|UNC18B|pp10122 syntaxin binding protein 2 protein-coding chr18-357 chr18 70377389 70377599 + 15.0 0.000 Intergenic Intergenic 7097 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LINC01910 - long intergenic non-protein coding RNA 1910 ncRNA chr12-3272 chr12 68521793 68522003 + 15.0 0.000 Intergenic Intergenic -70414 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr4-3949 chr4 173187808 173188018 + 15.0 0.000 intron (NM_017423, intron 1 of 11) intron (NM_017423, intron 1 of 11) -18261 NR_134241 101930370 Hs.563191 NR_134241 ENSG00000245213 LOC101930370 - uncharacterized LOC101930370 ncRNA chr17-1552 chr17 3865304 3865514 + 15.0 0.000 3' UTR (NM_172207, exon 16 of 16) 3' UTR (NM_172207, exon 16 of 16) -19163 NM_001114118 55421 Hs.120963 NM_018553 ENSG00000074356 NCBP3 C17orf85|ELG|HSA277841 nuclear cap binding subunit 3 protein-coding chrX-389 chrX 72714536 72714746 + 15.0 0.000 promoter-TSS (NM_001172436) promoter-TSS (NM_001172436) -335 NM_002637 5255 Hs.201379 NM_002637 ENSG00000067177 PHKA1 PHKA phosphorylase kinase regulatory subunit alpha 1 protein-coding chr7-1752 chr7 40437512 40437722 + 15.0 0.000 intron (NM_024728, intron 9 of 14) MamGypsy2-I|LTR|Gypsy 302641 NM_001193312 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding chr3-1983 chr3 142857165 142857375 + 15.0 0.000 intron (NM_013363, intron 2 of 8) BLACKJACK|DNA|hAT-Blackjack 31813 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr15-1560 chr15 69535361 69535571 + 15.0 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -26254 NR_026979 145837 Hs.410126 NR_026979 DRAIC - downregulated RNA in cancer, inhibitor of cell invasion and migration ncRNA chr15-269 chr15 65185182 65185392 + 15.0 0.000 promoter-TSS (NR_133680) promoter-TSS (NR_133680) 55 NR_133680 10845 Hs.113823 NM_006660 ENSG00000166855 CLPX EPP2 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding chr3-4013 chr3 61960614 61960824 + 15.0 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 358228 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chrX-292 chrX 93673529 93673739 + 15.0 0.000 promoter-TSS (NM_001171111) promoter-TSS (NM_001171111) -56 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr1-3107 chr1 39451281 39451491 + 14.8 0.000 intron (NM_012090, intron 80 of 92) intron (NM_012090, intron 80 of 92) -40250 NM_181809 353500 Hs.472497 NM_181809 ENSG00000183682 BMP8A - bone morphogenetic protein 8a protein-coding chr3-2914 chr3 51836586 51836796 + 14.8 0.000 Intergenic LTR16C|LTR|ERVL 9808 NM_001207023 401067 Hs.729443 NM_001085479 ENSG00000229972 IQCF3 - IQ motif containing F3 protein-coding chr9-1455 chr9 137035093 137035303 + 14.8 0.000 3' UTR (NM_207511, exon 3 of 3) 3' UTR (NM_207511, exon 3 of 3) -2358 NM_004479 2529 Hs.457 NM_004479 ENSG00000180549 FUT7 FucT-VII fucosyltransferase 7 protein-coding chr12-900 chr12 109093380 109093590 + 14.8 0.000 promoter-TSS (NM_001001655) promoter-TSS (NM_001001655) 3 NM_001145375 121642 Hs.374458 NM_001001655 ENSG00000189046 ALKBH2 ABH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase protein-coding chr1-3908 chr1 71955695 71955905 + 14.8 0.000 intron (NM_173808, intron 1 of 6) intron (NM_173808, intron 1 of 6) -118788 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr1-5029 chr1 84377519 84377729 + 14.8 0.000 intron (NR_003927, intron 2 of 6) intron (NR_003927, intron 2 of 6) 7177 NR_003927 391051 Hs.647646 NR_003927 UOX UOXP|URICASE urate oxidase (pseudogene) pseudo chr19-2548 chr19 46077634 46077844 + 14.8 0.000 promoter-TSS (NR_125344) promoter-TSS (NR_125344) -110 NR_163177 444882 Hs.531310 NM_001002923 ENSG00000204869 IGFL4 - IGF like family member 4 protein-coding chr7-3211 chr7 130839903 130840113 + 14.8 0.000 Intergenic Intergenic 36802 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr7-4891 chr7 122132413 122132623 + 14.8 0.000 intron (NM_005763, intron 2 of 23) L1MC4|LINE|L1 11731 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr16-968 chr16 22787922 22788132 + 14.8 0.000 Intergenic CR1-3_Croc|LINE|CR1 -26135 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr9-3113 chr9 73521353 73521563 + 14.8 0.000 Intergenic L1MB7|LINE|L1 369593 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr11-1666 chr11 9180730 9180940 + 14.8 0.000 exon (NM_015213, exon 6 of 23) exon (NM_015213, exon 6 of 23) 84491 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr20-748 chr20 19974590 19974800 + 14.8 0.000 exon (NM_018993, exon 7 of 11) exon (NM_018993, exon 7 of 11) -42595 NM_181528 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr11-1882 chr11 8838311 8838521 + 14.8 0.000 intron (NM_005418, intron 3 of 22) MIR1_Amn|SINE|MIR -27081 NM_139157 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr9-3256 chr9 16458852 16459062 + 14.8 0.000 intron (NM_001317939, intron 4 of 6) intron (NM_001317939, intron 4 of 6) -182644 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr15-503 chr15 100919086 100919296 + 14.8 0.000 promoter-TSS (NM_024652) promoter-TSS (NM_024652) 92 NR_135831 101927751 Hs.659224 NR_135827 ENSG00000259583 LOC101927751 - uncharacterized LOC101927751 ncRNA chr2-2737 chr2 148722024 148722234 + 14.8 0.000 intron (NM_015630, intron 2 of 13) L1MCa|LINE|L1 77378 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr20-998 chr20 59938301 59938511 + 14.8 0.000 3' UTR (NM_006242, exon 1 of 1) 3' UTR (NM_006242, exon 1 of 1) 1899 NM_006242 5509 Hs.42215 NM_006242 ENSG00000132825 PPP1R3D PPP1R6 protein phosphatase 1 regulatory subunit 3D protein-coding chr4-1386 chr4 139629759 139629969 + 14.8 0.000 Intergenic Intergenic -35904 NM_001204367 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr1-2391 chr1 163203001 163203211 + 14.8 0.000 promoter-TSS (NM_003617) promoter-TSS (NM_003617) -190 NM_001254749 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr6-1272 chr6 71478857 71479067 + 14.8 0.000 Intergenic Intergenic 57935 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr1-4228 chr1 162503065 162503275 + 14.8 0.000 intron (NM_144624, intron 3 of 6) intron (NM_144624, intron 3 of 6) 5352 NM_175866 127933 Hs.127310 NM_144624 ENSG00000152332 UHMK1 KIS|KIST|P-CIP2 U2AF homology motif kinase 1 protein-coding chr2-2279 chr2 28224678 28224888 + 14.8 0.000 intron (NM_199193, intron 8 of 13) intron (NM_199193, intron 8 of 13) -17822 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr19-1177 chr19 13103476 13103686 + 14.8 0.000 promoter-TSS (NM_005583) promoter-TSS (NM_005583) -723 NM_005583 4066 Hs.46446 NM_005583 ENSG00000104903 LYL1 bHLHa18 LYL1 basic helix-loop-helix family member protein-coding chr12-2731 chr12 7375776 7375986 + 14.8 0.000 exon (NM_174941, exon 10 of 20) exon (NM_174941, exon 10 of 20) 68304 NM_001297650 283316 Hs.631727 NM_174941 ENSG00000177675 CD163L1 CD163B|M160|SCARI2|WC1 CD163 molecule like 1 protein-coding chr10-1621 chr10 72175254 72175464 + 14.8 0.000 intron (NM_001369110, intron 5 of 8) intron (NM_001369110, intron 5 of 8) 40597 NM_001369088 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr8-1045 chr8 143207416 143207626 + 14.8 0.000 Intergenic Intergenic -5697 NM_178172 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr11-3450 chr11 66242607 66242817 + 14.8 0.000 intron (NM_018026, intron 22 of 23) MIR3|SINE|MIR -14582 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr12-674 chr12 9064583 9064793 + 14.8 0.000 promoter-TSS (NR_026971) promoter-TSS (NR_026971) 382 NR_034140 253128 Hs.408739 NM_001039381 ENSG00000214851 LINC00612 C12orf33 long intergenic non-protein coding RNA 612 ncRNA chr1-2670 chr1 184408216 184408426 + 14.8 0.000 intron (NM_030806, intron 1 of 5) intron (NM_030806, intron 1 of 5) 21292 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr11-3079 chr11 16360057 16360267 + 14.8 0.000 intron (NM_001367872, intron 3 of 16) MIRb|SINE|MIR -3616 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr9-2420 chr9 135265088 135265298 + 14.8 0.000 Intergenic LTR42|LTR|ERVL -78056 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding KZ559116.1-1 KZ559116.1 117079 117252 + 14.8 0.000 NA NA NA NA chr1-2366 chr1 67686697 67686907 + 14.8 0.000 intron (NM_001924, intron 3 of 3) intron (NM_001924, intron 3 of 3) 1601 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr6-744 chr6 37566319 37566529 + 14.8 0.000 Intergenic Intergenic -11002 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr15-1641 chr15 92645388 92645598 + 14.8 0.000 intron (NM_207446, intron 1 of 2) intron (NM_207446, intron 1 of 2) 10282 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr9-1571 chr9 34896035 34896245 + 14.8 0.000 promoter-TSS (NM_001309426) promoter-TSS (NM_001309426) -376 NM_001309426 100129969 Hs.571602 NM_001309426 ENSG00000187791 FAM205C FAM205CP family with sequence similarity 205 member C protein-coding chr12-1923 chr12 95083973 95084183 + 14.8 0.000 intron (NM_018351, intron 20 of 20) intron (NM_018351, intron 20 of 20) -10460 NM_001127362 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding chr5-1822 chr5 87020278 87020488 + 14.8 0.000 Intergenic L1PA15-16|LINE|L1 94571 NR_036243 100422887 NR_036243 ENSG00000265919 MIR4280 - microRNA 4280 ncRNA chr17-1403 chr17 54968366 54968576 + 14.8 0.000 promoter-TSS (NM_178509) promoter-TSS (NM_178509) 183 NR_135677 1353 Hs.591171 NM_004375 ENSG00000166260 COX11 COX11P cytochrome c oxidase copper chaperone COX11 protein-coding chr16-1565 chr16 85299073 85299283 + 14.8 0.000 Intergenic Intergenic 7147 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr2-5574 chr2 171958546 171958756 + 14.8 0.000 intron (NR_027862, intron 3 of 9) intron (NR_027862, intron 3 of 9) 36190 NM_003642 8520 Hs.632532 NM_003642 ENSG00000128708 HAT1 KAT1 histone acetyltransferase 1 protein-coding chr13-496 chr13 40504000 40504210 + 14.8 0.000 Intergenic Intergenic -23099 NR_024505 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr16-956 chr16 87132700 87132910 + 14.8 0.000 Intergenic Intergenic 75021 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr10-252 chr10 119029429 119029639 + 14.8 0.000 promoter-TSS (NM_199461) promoter-TSS (NM_199461) -180 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr3-2257 chr3 52181623 52181833 + 14.8 0.000 Intergenic Intergenic -16355 NM_199166 211 Hs.476308 NM_000688 ENSG00000023330 ALAS1 ALAS|ALAS-H|ALAS3|ALASH|MIG4 5'-aminolevulinate synthase 1 protein-coding chr16-655 chr16 88534291 88534501 + 14.8 0.000 exon (NM_153813, exon 10 of 10) exon (NM_153813, exon 10 of 10) -3343 NR_148997 100128882 Hs.722546 NR_148997 ENSG00000261744 LOC100128882 - uncharacterized LOC100128882 ncRNA chr7-1719 chr7 2807710 2807920 + 14.8 0.000 intron (NM_001293092, intron 1 of 2) intron (NM_001293092, intron 1 of 2) 7415 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr20-610 chr20 3407355 3407565 + 14.8 0.000 intron (NM_001009984, intron 1 of 36) CpG 202 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr2-2346 chr2 199379395 199379605 + 14.8 0.000 intron (NM_001172509, intron 5 of 10) MIRb|SINE|MIR 78439 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr9-2717 chr9 89880377 89880587 + 14.8 0.000 Intergenic Intergenic -88934 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr14-1086 chr14 37061713 37061923 + 14.8 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -109427 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr2-1018 chr2 8837375 8837585 + 14.8 0.000 non-coding (NR_145964, exon 1 of 32) non-coding (NR_145964, exon 1 of 32) 133 NM_001348732 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr12-1278 chr12 82862084 82862294 + 14.8 0.000 intron (NM_152588, intron 2 of 11) intron (NM_152588, intron 2 of 11) 175034 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr14-1433 chr14 74542440 74542650 + 14.8 0.000 intron (NM_000428, intron 8 of 35) intron (NM_000428, intron 8 of 35) 48780 NM_194279 122961 Hs.291079 NM_194279 ENSG00000165898 ISCA2 HBLD1|ISA2|MMDS4|c14_5557 iron-sulfur cluster assembly 2 protein-coding chr2-3227 chr2 231111980 231112190 + 14.8 0.000 intron (NM_000867, intron 3 of 3) intron (NM_000867, intron 3 of 3) 12957 NM_000867 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chrX-450 chrX 110180900 110181110 + 14.8 0.000 intron (NM_001353850, intron 7 of 7) intron (NM_001353850, intron 7 of 7) 44055 NR_004379 692226 NR_004379 ENSG00000208883 SNORD96B U96b small nucleolar RNA, C/D box 96B snoRNA chr7-2251 chr7 155738697 155738907 + 14.8 0.000 intron (NM_053043, intron 11 of 17) intron (NM_053043, intron 11 of 17) 70270 NR_132318 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr15-923 chr15 68789960 68790170 + 14.8 0.000 intron (NM_006305, intron 1 of 6) intron (NM_006305, intron 1 of 6) 11860 NR_036197 100422971 NR_036197 ENSG00000265195 MIR4312 - microRNA 4312 ncRNA chr12-1495 chr12 38823812 38824022 + 14.8 0.000 intron (NM_153634, intron 6 of 19) intron (NM_153634, intron 6 of 19) 81674 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr18-991 chr18 24362973 24363183 + 14.8 0.000 intron (NM_080597, intron 4 of 27) L1M4a1|LINE|L1 34746 NM_080597 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr12-1557 chr12 109476022 109476232 + 14.8 0.000 intron (NM_001317395, intron 1 of 6) MER5A|DNA|hAT-Charlie 1173 NM_001317399 83892 Hs.524731 NM_031954 ENSG00000110906 KCTD10 BTBD28|MSTP028|ULRO61|hBACURD3 potassium channel tetramerization domain containing 10 protein-coding chr16-1728 chr16 58127056 58127266 + 14.8 0.000 intron (NM_013242, intron 1 of 5) intron (NM_013242, intron 1 of 5) 2220 NM_013242 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr19-1867 chr19 18529902 18530112 + 14.8 0.000 Intergenic Intergenic -7937 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr12-1001 chr12 124720283 124720493 + 14.8 0.000 Intergenic L2a|LINE|L2 119283 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chrX-607 chrX 150200975 150201185 + 14.8 0.000 Intergenic MIR3|SINE|MIR -26924 NR_031748 100313839 NR_031748 ENSG00000252454 MIR2114 - microRNA 2114 ncRNA chr2-1699 chr2 173658426 173658636 + 14.8 0.000 Intergenic Intergenic 303659 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr5-1672 chr5 55438424 55438634 + 14.8 0.000 intron (NR_103485, intron 5 of 6) intron (NR_103485, intron 5 of 6) 70397 NR_049869 100847019 NR_049869 ENSG00000265135 MIR5687 - microRNA 5687 ncRNA chr8-795 chr8 104361258 104361468 + 14.8 0.000 Intergenic Intergenic 21537 NM_030788 81501 Hs.652230 NM_030788 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding chr17-1877 chr17 43846241 43846451 + 14.8 0.000 promoter-TSS (NM_001168324) promoter-TSS (NM_001168324) -830 NM_001168324 146894 Hs.147313 NM_145273 ENSG00000161649 CD300LG CLM-9|CLM9|NEPMUCIN|TREM-4|TREM4 CD300 molecule like family member g protein-coding chr11-1350 chr11 35617988 35618198 + 14.8 0.000 promoter-TSS (NM_014344) promoter-TSS (NM_014344) -367 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr19-1438 chr19 4927343 4927553 + 14.8 0.000 intron (NM_001290051, intron 2 of 16) intron (NM_001290051, intron 2 of 16) -5239 NR_039902 100616337 NR_039902 ENSG00000263409 MIR4747 mir-4747 microRNA 4747 ncRNA chr19-4097 chr19 15556479 15556689 + 14.8 0.000 Intergenic Intergenic 48059 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr18-448 chr18 46946738 46946948 + 14.8 0.000 promoter-TSS (NM_031303) promoter-TSS (NM_031303) 8 NM_001367621 83473 Hs.404137 NM_031303 ENSG00000167216 KATNAL2 - katanin catalytic subunit A1 like 2 protein-coding chr2-4119 chr2 157190183 157190393 + 14.8 0.000 Intergenic Intergenic -67417 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr5-491 chr5 74640638 74640848 + 14.8 0.000 non-coding (NR_046318, exon 1 of 2) non-coding (NR_046318, exon 1 of 2) 681 NR_046318 8507 Hs.104925 NM_003633 ENSG00000171617 ENC1 CCL28|ENC-1|KLHL35|KLHL37|NRPB|PIG10|TP53I10 ectodermal-neural cortex 1 protein-coding chr9-1652 chr9 5799380 5799590 + 14.8 0.000 intron (NM_024896, intron 11 of 14) intron (NM_024896, intron 11 of 14) 33632 NM_024896 79956 Hs.591078 NM_024896 ENSG00000099219 ERMP1 FXNA|KIAA1815|bA207C16.3 endoplasmic reticulum metallopeptidase 1 protein-coding chr17-2966 chr17 63627186 63627396 + 14.8 0.000 intron (NM_203351, intron 1 of 16) intron (NM_203351, intron 1 of 16) 4874 NM_203351 4215 Hs.29282 NM_002401 ENSG00000198909 MAP3K3 MAPKKK3|MEKK3 mitogen-activated protein kinase kinase kinase 3 protein-coding chr10-2088 chr10 113521093 113521303 + 14.8 0.000 Intergenic Intergenic -29633 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr5-1834 chr5 103259697 103259907 + 14.8 0.000 intron (NM_001316968, intron 1 of 2) CpG 378 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr6-1720 chr6 34925820 34926030 + 14.8 0.000 intron (NM_015245, intron 1 of 23) MER20|DNA|hAT-Charlie 36670 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr5-1306 chr5 57841796 57842006 + 14.8 0.000 Intergenic Intergenic 57261 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr7-805 chr7 101217499 101217709 + 14.8 0.000 promoter-TSS (NM_006349) promoter-TSS (NM_006349) -23 NM_001084 8985 Hs.153357 NM_001084 ENSG00000106397 PLOD3 LH3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 protein-coding chr4-1270 chr4 41061478 41061688 + 14.8 0.000 intron (NM_001330658, intron 3 of 15) Tigger3a|DNA|TcMar-Tigger 152959 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr11-1497 chr11 11404403 11404613 + 14.8 0.000 intron (NM_001363464, intron 3 of 9) intron (NM_001363464, intron 3 of 9) -51258 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr5-575 chr5 157575856 157576066 + 14.8 0.000 promoter-TSS (NM_033274) promoter-TSS (NM_033274) -186 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr1-3698 chr1 185719143 185719353 + 14.8 0.000 Intergenic Intergenic -15143 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr10-1578 chr10 12709615 12709825 + 14.8 0.000 intron (NM_001351032, intron 5 of 11) intron (NM_001351032, intron 5 of 11) 15633 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr22-1434 chr22 45362498 45362708 + 14.8 0.000 intron (NM_148674, intron 16 of 24) L2|LINE|L2 44160 NM_001349913 55007 Hs.265018 NM_017911 ENSG00000100376 FAM118A C22orf8 family with sequence similarity 118 member A protein-coding chr21-148 chr21 42315672 42315882 + 14.8 0.000 promoter-TSS (NM_003226) promoter-TSS (NM_003226) -181 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr19-1106 chr19 3404600 3404810 + 14.8 0.000 intron (NM_001245002, intron 2 of 10) CpG 38122 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chrX-710 chrX 102659946 102660156 + 14.8 0.000 promoter-TSS (NR_146585) promoter-TSS (NR_146585) 68 NR_146585 100528062 Hs.522729 NM_001199818 ENSG00000286237 ARMCX5-GPRASP2 ARMCX5-GPRASP2-BHLHB9-LINC00630|bHLHb9|p60TRP ARMCX5-GPRASP2 readthrough protein-coding chr6-1548 chr6 87697865 87698075 + 14.8 0.000 intron (NM_018064, intron 1 of 4) intron (NM_018064, intron 1 of 4) 4263 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr12-1662 chr12 53201075 53201285 + 14.8 0.000 5' UTR (NM_000889, exon 2 of 16) 5' UTR (NM_000889, exon 2 of 16) 6071 NM_000889 3695 Hs.654470 NM_000889 ENSG00000139626 ITGB7 - integrin subunit beta 7 protein-coding chr11-2360 chr11 114132886 114133096 + 14.8 0.000 intron (NM_006006, intron 2 of 6) intron (NM_006006, intron 2 of 6) 69780 NM_001354752 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr7-2151 chr7 45874249 45874459 + 14.8 0.000 Intergenic MIRb|SINE|MIR -14134 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding chr12-1626 chr12 109888260 109888470 + 14.8 0.000 Intergenic Intergenic -7824 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr19-1401 chr19 36916408 36916618 + 14.8 0.000 promoter-TSS (NM_001171979) promoter-TSS (NM_001171979) 181 NM_198539 374900 Hs.404220 NM_198539 ENSG00000198453 ZNF568 ZFP568 zinc finger protein 568 protein-coding chr3-1817 chr3 50121552 50121762 + 14.8 0.000 intron (NR_135301, intron 3 of 3) intron (NR_135301, intron 3 of 3) -20669 NR_045388 100775107 Hs.439480 NR_045388 ENSG00000281691 RBM5-AS1 LUST RBM5 antisense RNA 1 ncRNA chr1-3891 chr1 60171949 60172159 + 14.8 0.000 Intergenic Intergenic -98284 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr7-906 chr7 100466035 100466245 + 14.8 0.000 TTS (NM_001303043) TTS (NM_001303043) -1880 NM_001004323 402573 Hs.632306 NM_001004323 ENSG00000185955 C7orf61 - chromosome 7 open reading frame 61 protein-coding chr5-1916 chr5 173051923 173052133 + 14.8 0.000 Intergenic Intergenic -4324 NM_153607 153222 Hs.484195 NM_153607 ENSG00000164463 CREBRF C5orf41|LRF CREB3 regulatory factor protein-coding chr4-1081 chr4 140267030 140267240 + 14.8 0.000 intron (NM_032547, intron 1 of 4) intron (NM_032547, intron 1 of 4) 9827 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr14-957 chr14 55354665 55354875 + 14.8 0.000 Intergenic Intergenic 57088 NM_014924 22863 Hs.414809 NM_014924 ENSG00000126775 ATG14 ATG14L|BARKOR|KIAA0831 autophagy related 14 protein-coding chr13-1238 chr13 90118182 90118392 + 14.8 0.000 intron (NR_047489, intron 1 of 5) MIRb|SINE|MIR 1430 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr9-1690 chr9 93469155 93469365 + 14.8 0.000 intron (NM_001286723, intron 1 of 9) intron (NM_001286723, intron 1 of 9) -15659 NR_136229 158293 Hs.350364 NM_198841 ENSG00000188938 FAM120AOS C9orf10OS family with sequence similarity 120A opposite strand protein-coding chr7-4825 chr7 100904851 100905061 + 14.8 0.000 Intergenic L1ME4b|LINE|L1 -7962 NM_001367919 43 Hs.154495 NM_000665 ENSG00000087085 ACHE ACEE|ARACHE|N-ACHE|YT acetylcholinesterase (Cartwright blood group) protein-coding chr14-864 chr14 67619831 67620041 + 14.8 0.000 promoter-TSS (NM_001172) promoter-TSS (NM_001172) 16 NM_001172 384 Hs.226007 NM_001172 ENSG00000081181 ARG2 - arginase 2 protein-coding chr9-2449 chr9 13328130 13328340 + 14.8 0.000 Intergenic L1M2|LINE|L1 -48522 NM_001330637 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr2-2935 chr2 9251618 9251828 + 14.8 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 44911 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr6-2268 chr6 72210933 72211143 + 14.8 0.000 intron (NM_014989, intron 6 of 33) intron (NM_014989, intron 6 of 33) -1855 NM_001350441 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr15-1932 chr15 90647937 90648147 + 14.8 0.000 intron (NR_120372, intron 2 of 3) AluSx|SINE|Alu -12192 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr7-2303 chr7 91941598 91941808 + 14.8 0.000 intron (NM_147185, intron 1 of 49) MamRTE1|LINE|RTE-BovB 828 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr17-2161 chr17 45130063 45130273 + 14.8 0.000 intron (NM_133373, intron 1 of 14) intron (NM_133373, intron 1 of 14) 2347 NM_133373 113026 Hs.380094 NM_133373 ENSG00000161714 PLCD3 PLC-delta-3 phospholipase C delta 3 protein-coding chr4-2910 chr4 84995505 84995715 + 14.8 0.000 intron (NR_152782, intron 2 of 3) intron (NR_152782, intron 2 of 3) 28126 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr17-2791 chr17 5467341 5467551 + 14.8 0.000 intron (NM_020162, intron 1 of 11) LTR19A|LTR|ERV1 1536 NM_001199699 56919 Hs.250456 NM_020162 ENSG00000005100 DHX33 DDX33 DEAH-box helicase 33 protein-coding chr3-2248 chr3 48646324 48646534 + 14.8 0.000 intron (NM_001407, intron 21 of 34) intron (NM_001407, intron 21 of 34) -2149 NR_039956 100616112 NR_039956 ENSG00000284575 MIR4793 - microRNA 4793 ncRNA chr5-2289 chr5 43432048 43432258 + 14.8 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -19762 NM_148672 56477 Hs.656904 NM_019846 ENSG00000151882 CCL28 CCK1|MEC|SCYA28 C-C motif chemokine ligand 28 protein-coding chr22-489 chr22 19171475 19171685 + 14.8 0.000 promoter-TSS (NR_103767) promoter-TSS (NR_103767) -126 NR_103767 100652736 Hs.572896 NR_103767 LINC01311 - long intergenic non-protein coding RNA 1311 ncRNA chr13-1299 chr13 48411872 48412082 + 14.8 0.000 exon (NM_001162498, exon 1 of 1) exon (NM_001162498, exon 1 of 1) 1136 NM_001162498 10161 Hs.123464 NM_005767 ENSG00000139679 LPAR6 ARWH1|HYPT8|LAH3|P2RY5|P2Y5 lysophosphatidic acid receptor 6 protein-coding chr5-650 chr5 150302688 150302898 + 14.8 0.000 5' UTR (NM_001012301, exon 1 of 2) 5' UTR (NM_001012301, exon 1 of 2) 112 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr13-582 chr13 77026341 77026551 + 14.8 0.000 intron (NM_012158, intron 1 of 4) CpG 713 NM_012158 26224 Hs.508284 NM_012158 ENSG00000005812 FBXL3 FBL3|FBL3A|FBXL3A|IDDSFAS F-box and leucine rich repeat protein 3 protein-coding chr12-1614 chr12 77102811 77103021 + 14.8 0.000 Intergenic Intergenic -37347 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr10-2116 chr10 132183699 132183909 + 14.8 0.000 3' UTR (NM_001323090, exon 24 of 24) 3' UTR (NM_001323090, exon 24 of 24) -3144 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr2-1964 chr2 241223595 241223805 + 14.8 0.000 exon (NM_001370694, exon 23 of 25) exon (NM_001370694, exon 23 of 25) 35023 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr11-2526 chr11 74494333 74494543 + 14.8 0.000 promoter-TSS (NM_001144869) promoter-TSS (NM_001144869) -714 NM_001144869 387787 Hs.591971 NM_001144869 ENSG00000175536 LIPT2 - lipoyl(octanoyl) transferase 2 protein-coding chr12-1858 chr12 49133102 49133312 + 14.8 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -1812 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr2-3237 chr2 234032341 234032551 + 14.8 0.000 Intergenic HAL1|LINE|L1 -18256 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr5-434 chr5 15500106 15500316 + 14.8 0.000 promoter-TSS (NM_012304) promoter-TSS (NM_012304) 31 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr1-1878 chr1 113982530 113982740 + 14.8 0.000 TTS (NM_001286353) TTS (NM_001286353) 3161 NM_001286352 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr11-3282 chr11 82528539 82528749 + 14.8 0.000 Intergenic Intergenic -124731 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr2-1601 chr2 152445824 152446034 + 14.8 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 110755 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr2-2516 chr2 174787887 174788097 + 14.8 0.000 Intergenic Intergenic -23520 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr1-7217 chr1 222798334 222798544 + 14.8 0.000 Intergenic Intergenic -16600 NM_001350630 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr10-927 chr10 122154943 122155153 + 14.8 0.000 intron (NM_206862, intron 7 of 22) intron (NM_206862, intron 7 of 22) -8582 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr12-803 chr12 45234540 45234750 + 14.8 0.000 intron (NM_001025356, intron 1 of 19) intron (NM_001025356, intron 1 of 19) 18550 NM_001142679 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr17-2283 chr17 30413957 30414167 + 14.8 0.000 intron (NM_001304, intron 2 of 20) L2a|LINE|L2 33584 NM_001199775 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr1-6918 chr1 150747216 150747426 + 14.8 0.000 intron (NM_001199739, intron 6 of 6) L2c|LINE|L2 18457 NM_001199739 1520 Hs.181301 NM_004079 ENSG00000163131 CTSS - cathepsin S protein-coding chr20-1208 chr20 15240931 15241141 + 14.8 0.000 intron (NM_001351663, intron 6 of 17) L1MC5a|LINE|L1 44196 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr16-1265 chr16 53121673 53121883 + 14.8 0.000 intron (NM_025134, intron 1 of 38) intron (NM_025134, intron 1 of 38) -9234 NM_001352127 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr6-585 chr6 137867173 137867383 + 14.8 0.000 promoter-TSS (NM_001270508) promoter-TSS (NM_001270508) 19 NM_006290 7128 Hs.211600 NM_006290 ENSG00000118503 TNFAIP3 A20|AISBL|OTUD7C|TNFA1P2 TNF alpha induced protein 3 protein-coding chrX-364 chrX 154600419 154600629 + 14.8 0.000 Intergenic Intergenic 15370 NM_001327 1485 Hs.534310 NM_001327 ENSG00000184033 CTAG1B CT6.1|CTAG|CTAG1|ESO1|LAGE-2|LAGE2B|NY-ESO-1 cancer/testis antigen 1B protein-coding chr16-1214 chr16 69703638 69703848 + 14.8 0.000 3' UTR (NM_006599, exon 14 of 14) 3' UTR (NM_006599, exon 14 of 14) 4932 NR_145753 109617018 NR_145753 SNORD13H - small nucleolar RNA, C/D box 13H snoRNA chr10-1620 chr10 71255738 71255948 + 14.8 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -37615 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr9-1659 chr9 26809903 26810113 + 14.8 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 82794 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr4-1356 chr4 7276374 7276584 + 14.8 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -33971 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr6-1571 chr6 7692127 7692337 + 14.8 0.000 Intergenic Intergenic -33867 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr5-2149 chr5 93246166 93246376 + 14.8 0.000 Intergenic Intergenic 325072 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr9-1975 chr9 110650336 110650546 + 14.8 0.000 Intergenic Intergenic -18350 NM_001166281 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr7-1107 chr7 72784115 72784325 + 14.8 0.000 intron (NM_001145440, intron 6 of 13) intron (NM_001145440, intron 6 of 13) 43980 NM_001145440 441250 Hs.488614 NM_001145440 ENSG00000277149 TYW1B LINC00069|NCRNA00069|RSAFD2 tRNA-yW synthesizing protein 1 homolog B protein-coding chr21-494 chr21 21693689 21693899 + 14.8 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 43525 NR_038872 378828 Hs.551009 NR_038872 ENSG00000238265 LINC00317 C21orf117|NCRNA00317|PRED89 long intergenic non-protein coding RNA 317 ncRNA chr4-772 chr4 83851481 83851691 + 14.8 0.000 Intergenic Intergenic 315478 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr7-2716 chr7 32059818 32060028 + 14.8 0.000 intron (NM_001191059, intron 2 of 18) intron (NM_001191059, intron 2 of 18) 10484 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr7-2496 chr7 19558277 19558487 + 14.8 0.000 Intergenic Intergenic 147054 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr7-2571 chr7 117014766 117014976 + 14.8 0.000 promoter-TSS (NM_001369602) promoter-TSS (NM_001369602) -41 NM_001369602 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr8-272 chr8 47959978 47960188 + 14.8 0.000 promoter-TSS (NM_005914) promoter-TSS (NM_005914) 53 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr17-2956 chr17 61426962 61427172 + 14.8 0.000 Intergenic Intergenic 15316 NR_160788 388407 Hs.434459 NM_203425 C17orf82 - chromosome 17 open reading frame 82 ncRNA chr8-1342 chr8 69516387 69516597 + 14.8 0.000 intron (NR_156414, intron 2 of 20) MSTA|LTR|ERVL-MaLR 23645 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr6-2147 chr6 13891423 13891633 + 14.8 0.000 Intergenic Intergenic -32918 NM_001165034 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chr15-1004 chr15 71717123 71717333 + 14.8 0.000 intron (NM_001286429, intron 2 of 11) intron (NM_001286429, intron 2 of 11) -25689 NR_120346 101929173 Hs.680593 NR_120346 THSD4-AS2 - THSD4 antisense RNA 2 ncRNA chr3-886 chr3 13019297 13019507 + 14.8 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -32301 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr2-1506 chr2 26922778 26922988 + 14.8 0.000 intron (NM_020134, intron 2 of 12) intron (NM_020134, intron 2 of 12) -47754 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr7-1669 chr7 104922902 104923112 + 14.8 0.000 intron (NR_027374, intron 1 of 3) intron (NR_027374, intron 1 of 3) 3638 NR_027374 723809 Hs.124316 NR_027374 ENSG00000225329 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA chr7-1501 chr7 151046982 151047192 + 14.8 0.000 3' UTR (NM_007188, exon 16 of 16) 3' UTR (NM_007188, exon 16 of 16) -1205 NM_020321 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chr10-1318 chr10 77625348 77625558 + 14.8 0.000 intron (NM_001271519, intron 1 of 28) L1MB2|LINE|L1 12355 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr11-2694 chr11 104917959 104918169 + 14.8 0.000 intron (NR_034079, intron 1 of 4) intron (NR_034079, intron 1 of 4) 111 NR_034078 643733 Hs.713751 NR_034078 ENSG00000235505 CASP17P - caspase 17, pseudogene pseudo chr10-1713 chr10 77943545 77943755 + 14.8 0.000 Intergenic Intergenic 16838 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr11-1948 chr11 118870612 118870822 + 14.8 0.000 Intergenic Intergenic -13175 NM_001716 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr1-3248 chr1 202245562 202245772 + 14.8 0.000 intron (NM_001017404, intron 4 of 15) intron (NM_001017404, intron 4 of 15) 31512 NM_001017404 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr12-1559 chr12 111185569 111185779 + 14.8 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 85670 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr12-2612 chr12 122997328 122997538 + 14.8 0.000 exon (NM_001300801, exon 10 of 25) exon (NM_001300801, exon 10 of 25) 13295 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chr16-2381 chr16 66750451 66750661 + 14.8 0.000 intron (NM_006141, intron 2 of 12) intron (NM_006141, intron 2 of 12) 1053 NM_006141 1783 Hs.369068 NM_006141 ENSG00000135720 DYNC1LI2 DNCLI2|LIC2 dynein cytoplasmic 1 light intermediate chain 2 protein-coding chr4-598 chr4 139176211 139176421 + 14.8 0.000 intron (NM_001371324, intron 1 of 10) CpG 902 NM_001371338 chr1-3214 chr1 171699668 171699878 + 14.8 0.000 TTS (NR_033704) TTS (NR_033704) 42292 NM_001185127 8674 Hs.6651 NM_003762 ENSG00000117533 VAMP4 VAMP-4|VAMP24 vesicle associated membrane protein 4 protein-coding chr5-1683 chr5 74538316 74538526 + 14.8 0.000 Intergenic Intergenic -1445 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA chr1-3413 chr1 240413853 240414063 + 14.8 0.000 intron (NM_020066, intron 15 of 17) intron (NM_020066, intron 15 of 17) 198197 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr22-958 chr22 45875301 45875511 + 14.8 0.000 Intergenic L1M4|LINE|L1 101756 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr20-603 chr20 56752352 56752562 + 14.8 0.000 Intergenic Intergenic 123151 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr10-3429 chr10 36573980 36574190 + 14.8 0.000 Intergenic Intergenic -551772 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr3-595 chr3 129121884 129122094 + 14.8 0.000 promoter-TSS (NM_001204888) promoter-TSS (NM_001204888) 25 NM_001204884 339122 Hs.381132 NM_198490 ENSG00000172780 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding chr6-2144 chr6 13272774 13272984 + 14.8 0.000 TTS (NR_134859) TTS (NR_134859) 10563 NR_134859 100130357 Hs.484678 NM_001242698 LOC100130357 - uncharacterized LOC100130357 ncRNA chr12-1295 chr12 123289659 123289869 + 14.8 0.000 3' UTR (NM_001167856, exon 32 of 32) 3' UTR (NM_001167856, exon 32 of 32) -17524 NR_073007 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr11-2047 chr11 68164532 68164742 + 14.8 0.000 intron (NM_001300908, intron 10 of 10) intron (NM_001300908, intron 10 of 10) -43246 NM_212469 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr3-2397 chr3 185250360 185250570 + 14.8 0.000 intron (NM_001966, intron 1 of 6) intron (NM_001966, intron 1 of 6) 2807 NR_106712 100847054 NR_106712 ENSG00000264614 MIR5588 - microRNA 5588 ncRNA chrX-856 chrX 134334140 134334350 + 14.8 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -39067 NM_001015877 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr14-1021 chr14 35466802 35467012 + 14.8 0.000 Intergenic LTR8A|LTR|ERV1 -62153 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr8-844 chr8 135515888 135516098 + 14.8 0.000 intron (NM_006558, intron 1 of 8) Tigger3c|DNA|TcMar-Tigger 58537 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr17-2959 chr17 62405439 62405649 + 14.8 0.000 intron (NM_001144933, intron 8 of 11) intron (NM_001144933, intron 8 of 11) -18341 NM_181725 339175 Hs.381204 NM_181725 ENSG00000087995 METTL2A METTL2 methyltransferase like 2A protein-coding chr10-1502 chr10 13382958 13383168 + 14.8 0.000 Intergenic Intergenic -34765 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr9-1752 chr9 129887834 129888044 + 14.8 0.000 3' UTR (NM_015033, exon 17 of 17) 3' UTR (NM_015033, exon 17 of 17) 18334 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr8-2030 chr8 104278574 104278784 + 14.8 0.000 Intergenic LOR1-int|LTR|ERV1 55344 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr1-6319 chr1 2448032 2448242 + 14.8 0.000 Intergenic Intergenic -19314 NM_001303012 9651 Hs.170156 NM_014638 ENSG00000149527 PLCH2 PLC-L4|PLC-eta2|PLCL4|PLCeta2 phospholipase C eta 2 protein-coding chr9-1701 chr9 99057889 99058099 + 14.8 0.000 intron (NM_001855, intron 35 of 41) MLT1O|LTR|ERVL-MaLR -47119 NM_001306210 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr12-2373 chr12 22687719 22687929 + 14.8 0.000 3' UTR (NM_018638, exon 8 of 8) 3' UTR (NM_018638, exon 8 of 8) 62653 NM_001039481 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr4-1206 chr4 106587685 106587895 + 14.8 0.000 Intergenic Intergenic 154166 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA chr9-1402 chr9 110069840 110070050 + 14.8 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) 21347 NM_001004065 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr2-2969 chr2 31319881 31320091 + 14.8 0.000 Intergenic Intergenic 85834 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding chr17-1559 chr17 13114589 13114799 + 14.8 0.000 Intergenic Intergenic -96630 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr2-1340 chr2 150873025 150873235 + 14.8 0.000 Intergenic Intergenic 244233 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr2-3137 chr2 177598403 177598613 + 14.8 0.000 Intergenic Intergenic 20234 NM_152275 92104 Hs.128384 NM_152275 ENSG00000197557 TTC30A IFT70A|TTC30B tetratricopeptide repeat domain 30A protein-coding chr1-4871 chr1 32151415 32151625 + 14.8 0.000 intron (NM_012316, intron 1 of 13) L1MEc|LINE|L1 -28155 NM_175852 200081 Hs.17987 NM_175852 ENSG00000084652 TXLNA IL14|TXLN taxilin alpha protein-coding chr3-1177 chr3 161372218 161372428 + 14.8 0.000 promoter-TSS (NM_001040100) promoter-TSS (NM_001040100) -240 NM_001040100 165679 Hs.369104 NM_145035 ENSG00000196542 SPTSSB ADMP|C3orf57|SSSPTB serine palmitoyltransferase small subunit B protein-coding chr1-4050 chr1 203871168 203871378 + 14.8 0.000 TTS (NM_003094) TTS (NM_003094) 9426 NM_001328638 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding chr6-1440 chr6 157756636 157756846 + 14.8 0.000 Intergenic Intergenic -66505 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr2-2123 chr2 43344176 43344386 + 14.8 0.000 intron (NM_001083953, intron 29 of 37) intron (NM_001083953, intron 29 of 37) 117070 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr4-2113 chr4 57019049 57019259 + 14.8 0.000 intron (NM_001303269, intron 17 of 25) intron (NM_001303269, intron 17 of 25) 40258 NM_000938 5431 Hs.602757 NM_000938 ENSG00000047315 POLR2B POL2RB|RPB2|hRPB140 RNA polymerase II subunit B protein-coding chr3-884 chr3 9843357 9843567 + 14.8 0.000 intron (NM_001351737, intron 2 of 7) intron (NM_001351737, intron 2 of 7) 546 NM_001351736 285367 Hs.33719 NM_173659 ENSG00000156990 RPUSD3 - RNA pseudouridine synthase D3 protein-coding chr8-550 chr8 30384835 30385045 + 14.8 0.000 5' UTR (NM_006867, exon 1 of 10) 5' UTR (NM_006867, exon 1 of 10) 399 NM_006867 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr5-1856 chr5 137310450 137310660 + 14.8 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 182358 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr7-2442 chr7 129664544 129664754 + 14.8 0.000 intron (NM_001293164, intron 2 of 9) intron (NM_001293164, intron 2 of 9) 34571 NM_001040110 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr10-1694 chr10 13991037 13991247 + 14.8 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 17408 NM_001318336 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr3-1300 chr3 159882522 159882732 + 14.8 0.000 intron (NM_001197113, intron 6 of 10) intron (NM_001197113, intron 6 of 10) 42766 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chrX-178 chrX 2964102 2964312 + 14.8 0.000 intron (NM_001369080, intron 1 of 11) intron (NM_001369080, intron 1 of 11) 246 NM_001282628 415 Hs.386975 NM_000047 ENSG00000157399 ARSE ASE|CDPX|CDPX1|CDPXR arylsulfatase E protein-coding chr11-1266 chr11 12200925 12201135 + 14.8 0.000 intron (NR_144420, intron 3 of 27) intron (NR_144420, intron 3 of 27) 37347 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr17-2858 chr17 29312661 29312871 + 14.8 0.000 Intergenic Intergenic -18618 NM_020772 57532 Hs.462598 NM_020772 ENSG00000108256 NUFIP2 182-FIP|82-FIP|FIP-82|PIG1 nuclear FMR1 interacting protein 2 protein-coding chr5-555 chr5 139668227 139668437 + 14.8 0.000 intron (NM_001317203, intron 2 of 3) CpG -7111 NM_001317208 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr17-2054 chr17 57946355 57946565 + 14.8 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 8952 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr1-3268 chr1 219350296 219350506 + 14.8 0.000 Intergenic Intergenic 175432 NM_001300772 127018 Hs.657617 NM_138794 ENSG00000143353 LYPLAL1 Q96AV0 lysophospholipase like 1 protein-coding chr2-3824 chr2 26512283 26512493 + 14.8 0.000 intron (NM_194248, intron 5 of 46) intron (NM_194248, intron 5 of 46) -34264 NM_194322 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr11-1053 chr11 47257677 47257887 + 14.8 0.000 promoter-TSS (NM_005693) promoter-TSS (NM_005693) 75 NM_001363595 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr22-1435 chr22 45451361 45451571 + 14.8 0.000 Intergenic Intergenic 37773 NM_015653 26150 Hs.475110 NM_015653 ENSG00000128408 RIBC2 C22orf11|TRIB RIB43A domain with coiled-coils 2 protein-coding chr1-4579 chr1 94527478 94527688 + 14.8 0.000 Intergenic Intergenic 14176 NM_001993 2152 Hs.62192 NM_001993 ENSG00000117525 F3 CD142|TF|TFA coagulation factor III, tissue factor protein-coding chr19-863 chr19 49056338 49056548 + 14.8 0.000 promoter-TSS (NM_033142) promoter-TSS (NM_033142) -703 NM_033142 94027 Hs.681647 NM_033142 ENSG00000196337 CGB7 CG-beta-a|CGB6 chorionic gonadotropin subunit beta 7 protein-coding chr5-1332 chr5 137190747 137190957 + 14.8 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 62655 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr15-936 chr15 78233786 78233996 + 14.8 0.000 intron (NM_015162, intron 1 of 13) MIR3|SINE|MIR 674 NM_015162 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr10-1084 chr10 30776258 30776468 + 14.8 0.000 Intergenic Intergenic 53144 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr10-1135 chr10 29160075 29160285 + 14.8 0.000 Intergenic Intergenic -128890 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr4-1134 chr4 3440808 3441018 + 14.8 0.000 TTS (NM_198229) TTS (NM_198229) -1055 NM_001528 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr3-1802 chr3 43765587 43765797 + 14.8 0.000 Intergenic Intergenic -74098 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr6-3950 chr6 88589374 88589584 + 14.8 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -50110 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr16-713 chr16 19717914 19718124 + 14.8 0.000 non-coding (NR_130967, exon 2 of 8) non-coding (NR_130967, exon 2 of 8) 208 NM_001348535 400506 Hs.585209 NM_001012991 ENSG00000103550 KNOP1 101F10.1|C16orf88|FAM191A|TSG118 lysine rich nucleolar protein 1 protein-coding chr10-1364 chr10 125001930 125002140 + 14.8 0.000 intron (NM_001290214, intron 5 of 10) intron (NM_001290214, intron 5 of 10) 3983 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr2-2377 chr2 241270682 241270892 + 14.8 0.000 intron (NM_005336, intron 1 of 27) intron (NM_005336, intron 1 of 27) 1178 NM_001320966 3069 Hs.471851 NM_005336 ENSG00000115677 HDLBP HBP|PRO2900|VGL high density lipoprotein binding protein protein-coding chr4-1302 chr4 118154668 118154878 + 14.8 0.000 intron (NM_004784, intron 6 of 13) MIR3|SINE|MIR 120287 NR_146514 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chr2-1349 chr2 218958280 218958490 + 14.8 0.000 Intergenic Intergenic -1281 NM_003936 8941 Hs.158460 NM_003936 ENSG00000171450 CDK5R2 NCK5AI|P39|p39nck5ai cyclin dependent kinase 5 regulatory subunit 2 protein-coding chr3-2339 chr3 140176565 140176775 + 14.8 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 241485 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr4-1328 chr4 148214926 148215136 + 14.8 0.000 intron (NM_000901, intron 3 of 8) intron (NM_000901, intron 3 of 8) 227383 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr2-6851 chr2 72263293 72263503 + 14.8 0.000 intron (NR_135773, intron 19 of 21) intron (NR_135773, intron 19 of 21) -115536 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr12-1140 chr12 104736345 104736555 + 14.8 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 144817 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr11-3095 chr11 28153682 28153892 + 14.8 0.000 intron (NM_001113528, intron 3 of 6) intron (NM_001113528, intron 3 of 6) 45399 NM_001113528 196074 Hs.243326 NM_152636 ENSG00000169519 METTL15 METT5D1 methyltransferase like 15 protein-coding chr19-2006 chr19 31344331 31344541 + 14.8 0.000 intron (NR_138034, intron 1 of 1) intron (NR_138034, intron 1 of 1) 5000 NR_138036 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr6-1080 chr6 44373090 44373300 + 14.8 0.000 intron (NM_145026, intron 7 of 8) L1MEc|LINE|L1 -14511 NM_001253 988 Hs.485471 NM_001253 ENSG00000096401 CDC5L CDC5|CDC5-LIKE|CEF1|PCDC5RP|dJ319D22.1 cell division cycle 5 like protein-coding chr9-1730 chr9 124132825 124133035 + 14.8 0.000 Intergenic Intergenic 121162 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr2-1470 chr2 70112259 70112469 + 14.8 0.000 Intergenic Intergenic 12952 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr3-1799 chr3 40403394 40403604 + 14.8 0.000 intron (NM_001248, intron 4 of 10) LTR16A|LTR|ERVL 16315 NM_001291961 956 Hs.441145 NM_001248 ENSG00000168032 ENTPD3 CD39L3|HB6|NTPDase-3 ectonucleoside triphosphate diphosphohydrolase 3 protein-coding chr9-3807 chr9 128620164 128620374 + 14.8 0.000 intron (NM_003127, intron 43 of 55) intron (NM_003127, intron 43 of 55) 36581 NM_052844 89891 Hs.495240 NM_052844 ENSG00000119333 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding chr18-500 chr18 23453820 23454030 + 14.8 0.000 intron (NM_003831, intron 1 of 12) intron (NM_003831, intron 1 of 12) 638 NR_145477 8780 Hs.445511 NM_003831 ENSG00000101782 RIOK3 SUDD RIO kinase 3 protein-coding chr16-1526 chr16 56370946 56371156 + 14.8 0.000 intron (NM_001144, intron 10 of 13) intron (NM_001144, intron 10 of 13) 53938 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr10-1719 chr10 80256529 80256739 + 14.8 0.000 Intergenic Intergenic 8876 NR_136612 100130698 Hs.447456 NR_136612 LOC100130698 - uncharacterized LOC100130698 ncRNA chr20-504 chr20 43915481 43915691 + 14.8 0.000 promoter-TSS (NM_001098796) promoter-TSS (NM_001098796) -544 NM_001098796 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr11-2986 chr11 106421868 106422078 + 14.8 0.000 Intergenic Intergenic 170566 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr1-3446 chr1 24692691 24692901 + 14.8 0.000 Intergenic Intergenic 49217 NM_001366597 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr3-1643 chr3 119702805 119703015 + 14.8 0.000 promoter-TSS (NM_001320316) promoter-TSS (NM_001320316) -112 NM_001320317 89876 Hs.341906 NM_033364 ENSG00000183833 MAATS1 AAT1|AAT1alpha|C3orf15|CFAP91|CaM-IP2|SPATA26 MYCBP associated and testis expressed 1 protein-coding chr16-980 chr16 85027466 85027676 + 14.8 0.000 promoter-TSS (NM_001297766) promoter-TSS (NM_001297766) -180 NM_001297766 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chrX-501 chrX 68929608 68929818 + 14.8 0.000 Intergenic Intergenic 100716 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr14-1095 chr14 61472358 61472568 + 14.8 0.000 intron (NM_006255, intron 9 of 13) intron (NM_006255, intron 9 of 13) 97731 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr5-1087 chr5 67015569 67015779 + 14.8 0.000 intron (NM_001297651, intron 1 of 25) intron (NM_001297651, intron 1 of 25) 11019 NM_001290227 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chrX-611 chrX 154025450 154025660 + 14.8 0.000 3' UTR (NM_001316337, exon 5 of 5) 3' UTR (NM_001316337, exon 5 of 5) -5566 NR_031757 100313781 NR_031757 ENSG00000284286 MIR718 hsa-mir-718 microRNA 718 ncRNA chr16-459 chr16 4958125 4958335 + 14.8 0.000 promoter-TSS (NM_014692) promoter-TSS (NM_014692) -100 NM_014692 9717 Hs.512856 NM_014692 ENSG00000103184 SEC14L5 PRELID4B SEC14 like lipid binding 5 protein-coding chr10-937 chr10 13746819 13747029 + 14.8 0.000 intron (NM_001318336, intron 8 of 23) intron (NM_001318336, intron 8 of 23) -39357 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr2-4263 chr2 226650279 226650489 + 14.8 0.000 Intergenic Intergenic 8409 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr5-554 chr5 132674807 132675017 + 14.8 0.000 intron (NM_000589, intron 2 of 3) intron (NM_000589, intron 2 of 3) 923 NM_000589 3565 Hs.73917 NM_000589 ENSG00000113520 IL4 BCGF-1|BCGF1|BSF-1|BSF1|IL-4 interleukin 4 protein-coding chr9-1230 chr9 134125253 134125463 + 14.8 0.000 Intergenic Intergenic -10724 NM_017588 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr17-1162 chr17 27384573 27384783 + 14.8 0.000 Intergenic Intergenic -33327 NR_033892 440419 Hs.385755 NR_033892 ENSG00000266433 TBC1D3P5 - TBC1 domain family member 3 pseudogene 5 pseudo chr15-1478 chr15 36499820 36500030 + 14.8 0.000 Intergenic Intergenic -79701 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr4-1514 chr4 83128674 83128884 + 14.8 0.000 Intergenic Intergenic -14050 NM_001130715 51316 Hs.546392 NM_016619 ENSG00000145287 PLAC8 C15|DGIC|PNAS-144|onzin placenta associated 8 protein-coding chr3-1484 chr3 100902666 100902876 + 14.8 0.000 intron (NM_001349332, intron 2 of 35) intron (NM_001349332, intron 2 of 35) 90719 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr1-2664 chr1 182839106 182839316 + 14.8 0.000 promoter-TSS (NR_033302) promoter-TSS (NR_033302) -136 NM_001357 1660 Hs.191518 NM_001357 ENSG00000135829 DHX9 DDX9|LKP|NDH2|NDHII|RHA DExH-box helicase 9 protein-coding chr4-1213 chr4 126081399 126081609 + 14.8 0.000 Intergenic Intergenic 574245 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr16-1023 chr16 88754228 88754438 + 14.8 0.000 intron (NM_001142864, intron 1 of 50) intron (NM_001142864, intron 1 of 50) 11566 NR_120387 339059 Hs.449817 NR_120387 ENSG00000182376 LOC339059 - uncharacterized LOC339059 ncRNA chr8-1892 chr8 23475444 23475654 + 14.8 0.000 Intergenic Intergenic -17818 NM_001128930 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr5-3367 chr5 138523095 138523305 + 14.8 0.000 intron (NR_157090, intron 2 of 9) AluSc|SINE|Alu 18511 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr4-2164 chr4 93914716 93914926 + 14.8 0.000 Intergenic Intergenic 86068 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr12-1293 chr12 123019227 123019437 + 14.8 0.000 intron (NM_020845, intron 2 of 24) L1ME3A|LINE|L1 -8604 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA GL000224.1-2 GL000224.1 19307 19517 + 14.8 0.000 NA NA NA NA chr8-691 chr8 140119303 140119513 + 14.8 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -18873 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr4-843 chr4 20700122 20700332 + 14.8 0.000 promoter-TSS (NM_001258345) promoter-TSS (NM_001258345) -231 NR_047661 133015 Hs.479298 NM_145048 ENSG00000163138 PACRGL C4orf28 parkin coregulated like protein-coding chr16-2790 chr16 50338421 50338631 + 14.8 0.000 intron (NM_013263, intron 6 of 16) intron (NM_013263, intron 6 of 16) 30462 NM_013263 29117 Hs.437894 NM_013263 ENSG00000166164 BRD7 BP75|CELTIX1|NAG4 bromodomain containing 7 protein-coding chr5-1048 chr5 38556443 38556653 + 14.8 0.000 promoter-TSS (NR_103553) promoter-TSS (NR_103553) 98 NM_001127671 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS LIF receptor subunit alpha protein-coding chr9-1329 chr9 84397947 84398157 + 14.8 0.000 Intergenic Intergenic -29325 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr1-2814 chr1 25695180 25695390 + 14.8 0.000 intron (NM_020379, intron 2 of 11) intron (NM_020379, intron 2 of 11) 77817 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr9-1856 chr9 34954001 34954211 + 14.8 0.000 Intergenic AluJo|SINE|Alu -3381 NM_001304333 23349 Hs.7989 NM_015297 ENSG00000122733 PHF24 - PHD finger protein 24 protein-coding chr6-1893 chr6 159919021 159919231 + 14.8 0.000 Intergenic Intergenic 28138 NM_002377 4142 Hs.99900 NM_002377 ENSG00000130368 MAS1 MAS|MGRA MAS1 proto-oncogene, G protein-coupled receptor protein-coding chr1-3935 chr1 96522948 96523158 + 14.8 0.000 Intergenic Intergenic -148928 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr13-628 chr13 50914508 50914718 + 14.8 0.000 intron (NM_001142279, intron 1 of 9) intron (NM_001142279, intron 1 of 9) -3901 NR_046552 100874255 Hs.741501 NR_046552 RNASEH2B-AS1 - RNASEH2B antisense RNA 1 ncRNA chr11-2422 chr11 12862993 12863203 + 14.8 0.000 intron (NM_021961, intron 4 of 12) intron (NM_021961, intron 4 of 12) 126450 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr1-3433 chr1 9852457 9852667 + 14.8 0.000 intron (NM_020248, intron 5 of 5) intron (NM_020248, intron 5 of 5) -28036 NM_001009566 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr3-3748 chr3 2998006 2998216 + 14.8 0.000 intron (NM_175607, intron 14 of 24) intron (NM_175607, intron 14 of 24) 63034 NR_046554 100873975 Hs.581502 NR_046554 CNTN4-AS1 - CNTN4 antisense RNA 1 ncRNA chr2-2841 chr2 126615036 126615246 + 14.8 0.000 Intergenic Intergenic -40794 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr6-1070 chr6 33677251 33677461 + 14.8 0.000 intron (NM_002224, intron 27 of 57) intron (NM_002224, intron 27 of 57) -20772 NR_037498 100500873 NR_037498 ENSG00000266509 MIR3934 - microRNA 3934 ncRNA chr8-2022 chr8 102391025 102391235 + 14.8 0.000 intron (NM_001282873, intron 1 of 58) AluJb|SINE|Alu 21559 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr1-1767 chr1 10674544 10674754 + 14.8 0.000 intron (NM_001079843, intron 4 of 20) intron (NM_001079843, intron 4 of 20) 121997 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr5-3264 chr5 105903295 105903505 + 14.8 0.000 Intergenic (ATTTC)n|Simple_repeat|Simple_repeat 803926 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr16-1020 chr16 87179084 87179294 + 14.8 0.000 Intergenic Intergenic -32926 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr10-2820 chr10 16986426 16986636 + 14.8 0.000 intron (NM_001081, intron 29 of 66) intron (NM_001081, intron 29 of 66) 143286 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr22-623 chr22 31585380 31585590 + 14.8 0.000 intron (NM_001007467, intron 14 of 32) intron (NM_001007467, intron 14 of 32) 36046 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr1-3895 chr1 61692496 61692706 + 14.8 0.000 intron (NR_135160, intron 5 of 7) GA-rich|Low_complexity|Low_complexity 32540 NM_032027 83941 Hs.656790 NM_032027 ENSG00000162604 TM2D1 BBP TM2 domain containing 1 protein-coding chr11-3758 chr11 46489597 46489807 + 14.8 0.000 intron (NM_001267782, intron 13 of 19) intron (NM_001267782, intron 13 of 19) -37813 NR_036117 100422827 NR_036117 ENSG00000265014 MIR3160-1 mir-3160-1 microRNA 3160-1 ncRNA chr6-2157 chr6 16713033 16713243 + 14.8 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 47046 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr8-1424 chr8 90888703 90888913 + 14.8 0.000 intron (NM_022351, intron 5 of 12) intron (NM_022351, intron 5 of 12) 96269 NM_001363275 100127983 Hs.733266 NM_001190972 ENSG00000253250 C8orf88 - chromosome 8 open reading frame 88 protein-coding chr12-3091 chr12 15038365 15038575 + 14.8 0.000 Intergenic L1P4e|LINE|L1 36637 NR_120466 101928340 Hs.401232 NR_120466 ENSG00000255727 LINC01489 - long intergenic non-protein coding RNA 1489 ncRNA chr1-4606 chr1 152162858 152163068 + 14.8 0.000 Intergenic Intergenic -3735 NM_001122965 126638 Hs.376144 NM_152364 ENSG00000215853 RPTN - repetin protein-coding chr6-1230 chr6 134537197 134537407 + 14.8 0.000 intron (NR_125856, intron 1 of 2) intron (NR_125856, intron 1 of 2) 2703 NR_125855 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr3-2172 chr3 180926138 180926348 + 14.8 0.000 intron (NM_001363882, intron 2 of 16) intron (NM_001363882, intron 2 of 16) 13572 NM_001363882 8087 Hs.478407 NM_005087 ENSG00000114416 FXR1 FXR1P FMR1 autosomal homolog 1 protein-coding chr12-911 chr12 10364261 10364471 + 14.8 0.000 intron (NR_120430, intron 1 of 3) HERV15-int|LTR|ERV1 597 NR_120430 101928100 Hs.638425 NR_120430 ENSG00000245648 LOC101928100 - uncharacterized LOC101928100 ncRNA chr4-2074 chr4 20341101 20341311 + 14.8 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) -50983 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr1-2531 chr1 1440879 1441089 + 14.8 0.000 3' UTR (NM_022834, exon 3 of 3) 3' UTR (NM_022834, exon 3 of 3) 5294 NM_022834 64856 Hs.449009 NM_022834 ENSG00000179403 VWA1 WARP von Willebrand factor A domain containing 1 protein-coding chr14-1153 chr14 41992096 41992306 + 14.8 0.000 Intergenic Intergenic 385345 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr3-1959 chr3 48715341 48715551 + 14.8 0.000 5' UTR (NM_001190317, exon 2 of 3) 5' UTR (NM_001190317, exon 2 of 3) 1775 NM_001005911 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr13-630 chr13 75908233 75908443 + 14.8 0.000 Intergenic MIR|SINE|MIR 26794 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr19-1500 chr19 45799022 45799232 + 14.8 0.000 intron (NM_030785, intron 5 of 5) intron (NM_030785, intron 5 of 5) -6282 NM_004943 1762 Hs.515474 NM_004943 ENSG00000185800 DMWD D19S593E|DMR-N9|DMRN9|gene59 DM1 locus, WD repeat containing protein-coding chr10-1468 chr10 99371030 99371240 + 14.8 0.000 intron (NM_001345889, intron 7 of 10) intron (NM_001345889, intron 7 of 10) 41779 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr9-1802 chr9 40929018 40929228 + 14.8 0.000 promoter-TSS (NR_031629) promoter-TSS (NR_031629) -31 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr14-2187 chr14 99757521 99757731 + 14.8 0.000 Intergenic Intergenic -35787 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr22-819 chr22 19718186 19718396 + 14.8 0.000 promoter-TSS (NR_037612) promoter-TSS (NR_037612) -152 NM_001009939 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding chr3-1423 chr3 189204447 189204657 + 14.8 0.000 intron (NM_198485, intron 1 of 5) intron (NM_198485, intron 1 of 5) 32581 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr1-1409 chr1 248858943 248859153 + 14.8 0.000 promoter-TSS (NM_001350072) promoter-TSS (NM_001350072) 37 NM_001136036 55657 Hs.377705 NM_017865 ENSG00000171163 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding chr1-1887 chr1 164602727 164602937 + 14.8 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 43110 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr7-759 chr7 151736308 151736518 + 14.8 0.000 promoter-TSS (NM_001363698) promoter-TSS (NM_001363698) -99 NM_001304527 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr20-1280 chr20 48265882 48266092 + 14.8 0.000 Intergenic Intergenic -93924 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr1-2709 chr1 225933161 225933371 + 14.8 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 7954 NM_003240 7044 Hs.520187 NM_003240 ENSG00000143768 LEFTY2 EBAF|LEFTA|LEFTYA|TGFB4 left-right determination factor 2 protein-coding chr3-3175 chr3 180096465 180096675 + 14.8 0.000 Intergenic Intergenic -59633 NM_001349399 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr12-972 chr12 25935970 25936180 + 14.8 0.000 Intergenic Intergenic 21510 NR_038227 100506451 Hs.560092 NR_038227 RASSF8-AS1 - RASSF8 antisense RNA 1 ncRNA chr20-995 chr20 57928121 57928331 + 14.8 0.000 Intergenic Intergenic -75678 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr3-2266 chr3 57918207 57918417 + 14.8 0.000 3' UTR (NM_001311179, exon 7 of 7) 3' UTR (NM_001311179, exon 7 of 7) 28310 NM_001304422 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr3-960 chr3 53804930 53805140 + 14.8 0.000 exon (NM_000720, exon 46 of 49) exon (NM_000720, exon 46 of 49) 41384 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr3-2198 chr3 13025210 13025420 + 14.8 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -38214 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr13-838 chr13 74032409 74032619 + 14.8 0.000 intron (NM_007249, intron 1 of 7) intron (NM_007249, intron 1 of 7) 101415 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr14-959 chr14 58738233 58738443 + 14.8 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -89950 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr4-785 chr4 1229763 1229973 + 14.8 0.000 intron (NM_001012614, intron 3 of 9) intron (NM_001012614, intron 3 of 9) 19262 NM_001012614 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS|HADDTS C-terminal binding protein 1 protein-coding chr22-990 chr22 39077188 39077398 + 14.8 0.000 promoter-TSS (NM_021822) promoter-TSS (NM_021822) 18 NR_146179 60489 Hs.660143 NM_021822 ENSG00000239713 APOBEC3G A3G|ARCD|ARP-9|ARP9|CEM-15|CEM15|MDS019|bK150C2.7|dJ494G10.1 apolipoprotein B mRNA editing enzyme catalytic subunit 3G protein-coding chr17-731 chr17 42833158 42833368 + 14.8 0.000 promoter-TSS (NM_176863) promoter-TSS (NM_176863) -134 NM_176863 10197 Hs.152978 NM_005789 ENSG00000131467 PSME3 HEL-S-283|Ki|PA28-gamma|PA28G|PA28gamma|REG-GAMMA proteasome activator subunit 3 protein-coding chr15-822 chr15 90845315 90845525 + 14.8 0.000 Intergenic Intergenic -23168 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr19-2820 chr19 51075604 51075814 + 14.8 0.000 Intergenic Intergenic 7147 NR_163144 43847 Hs.283925 NM_022046 ENSG00000129437 KLK14 KLK-L6 kallikrein related peptidase 14 protein-coding chr20-890 chr20 35875505 35875715 + 14.8 0.000 intron (NM_016436, intron 9 of 17) intron (NM_016436, intron 9 of 17) 79016 NM_033630 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding chr1-4764 chr1 9877134 9877344 + 14.8 0.000 intron (NM_020248, intron 3 of 5) intron (NM_020248, intron 3 of 5) 33030 NM_001012329 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr5-595 chr5 154938002 154938212 + 14.8 0.000 exon (NM_001252156, exon 1 of 28) exon (NM_001252156, exon 1 of 28) 104 NM_015465 25929 Hs.483921 NM_015465 ENSG00000082516 GEMIN5 GEMIN-5 gem nuclear organelle associated protein 5 protein-coding chr11-1215 chr11 11584519 11584729 + 14.8 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 37381 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chrX-199 chrX 74535852 74536062 + 14.8 0.000 Intergenic CpG 78667 NM_016120 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr7-1275 chr7 134547536 134547746 + 14.8 0.000 Intergenic HERVI-int|LTR|ERV1 -1469 NM_001367821 441282 Hs.729418 NM_001080538 ENSG00000227471 AKR1B15 AKR1B10L|AKR1B10L, AK1R1B7|AKR1R1B7 aldo-keto reductase family 1 member B15 protein-coding chr1-2397 chr1 181166700 181166910 + 14.8 0.000 Intergenic Intergenic -7679 NR_125966 101928973 Hs.637822 NR_125966 ENSG00000237292 LINC01732 - long intergenic non-protein coding RNA 1732 ncRNA chr20-780 chr20 50144424 50144634 + 14.8 0.000 intron (NM_199129, intron 1 of 5) MER102c|DNA|hAT-Charlie 9194 NM_199129 387521 Hs.744839 NM_199129 ENSG00000240849 TMEM189 KUA transmembrane protein 189 protein-coding chr4-1163 chr4 180913825 180914035 + 14.8 0.000 Intergenic Intergenic 245219 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr7-1680 chr7 128796434 128796644 + 14.8 0.000 intron (NM_001367764, intron 4 of 17) L2a|LINE|L2 4571 NM_022742 64753 Hs.521178 NM_022742 ENSG00000128596 CCDC136 NAG6 coiled-coil domain containing 136 protein-coding chr4-1426 chr4 53855280 53855490 + 14.8 0.000 Intergenic Intergenic 131897 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr11-2080 chr11 87425454 87425664 + 14.8 0.000 Intergenic Intergenic 293852 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chrX-399 chrX 23752832 23753042 + 14.8 0.000 Intergenic MIR3|SINE|MIR -9661 NM_001033583 23597 Hs.298885 NM_001033583 ENSG00000123130 ACOT9 ACATE2|CGI-16|MT-ACT48|MTACT48 acyl-CoA thioesterase 9 protein-coding chr14-723 chr14 56120289 56120499 + 14.8 0.000 intron (NM_021255, intron 1 of 5) intron (NM_021255, intron 1 of 5) 1983 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr7-2791 chr7 79927219 79927429 + 14.8 0.000 Intergenic Intergenic -207507 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr12-2024 chr12 49279554 49279764 + 14.8 0.000 Intergenic Intergenic 14577 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr10-3157 chr10 74145131 74145341 + 14.8 0.000 intron (NM_207012, intron 1 of 9) intron (NM_207012, intron 1 of 9) 5592 NR_135191 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr8-1606 chr8 143469922 143470132 + 14.8 0.000 intron (NM_015117, intron 5 of 11) intron (NM_015117, intron 5 of 11) 36221 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr3-2970 chr3 73229802 73230012 + 14.8 0.000 Intergenic Intergenic 168248 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr6-2130 chr6 3823113 3823323 + 14.8 0.000 Intergenic Intergenic -26155 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr4-1062 chr4 99056044 99056254 + 14.8 0.000 intron (NM_015143, intron 9 of 10) intron (NM_015143, intron 9 of 10) 32639 NM_000671 128 Hs.78989 NM_000671 ENSG00000197894 ADH5 ADH-3|ADHX|FALDH|FDH|GSH-FDH|GSNOR|HEL-S-60p alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding chr10-1068 chr10 119543322 119543532 + 14.8 0.000 promoter-TSS (NM_001005339) promoter-TSS (NM_001005339) -708 NM_001005339 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chrX-864 chrX 148030563 148030773 + 14.8 0.000 Intergenic Intergenic 49331 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr14-2044 chr14 64673902 64674112 + 14.8 0.000 Intergenic Intergenic -30417 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr19-1170 chr19 5340813 5341023 + 14.8 0.000 promoter-TSS (NM_130855) promoter-TSS (NM_130855) -106 NM_130854 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr8-1983 chr8 80020415 80020625 + 14.8 0.000 intron (NM_014018, intron 1 of 2) intron (NM_014018, intron 1 of 2) 9739 NM_014018 28957 Hs.521124 NM_014018 ENSG00000147586 MRPS28 HSPC007|MRP-S28|MRP-S35|MRPS35 mitochondrial ribosomal protein S28 protein-coding chr10-1002 chr10 94006694 94006904 + 14.8 0.000 intron (NM_001288989, intron 1 of 32) L3|LINE|CR1 12868 NM_001288989 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr7-1041 chr7 100049772 100049982 + 14.8 0.000 promoter-TSS (NM_001362779) promoter-TSS (NM_001362779) 83 NM_001362780 7589 Hs.632294 NM_145914 ENSG00000166529 ZSCAN21 NY-REN-21|ZNF38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding chr4-1028 chr4 14345506 14345716 + 14.8 0.000 Intergenic THE1D|LTR|ERVL-MaLR 233643 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr5-2812 chr5 16467430 16467640 + 14.8 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -1735 NM_033414 90441 Hs.60300 NM_033414 ENSG00000173545 ZNF622 ZPR9 zinc finger protein 622 protein-coding chr3-2011 chr3 29972655 29972865 + 14.8 0.000 intron (NM_001003792, intron 11 of 13) intron (NM_001003792, intron 11 of 13) -38604 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr1-2267 chr1 211613451 211613661 + 14.8 0.000 Intergenic Intergenic -26252 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr14-1221 chr14 90759133 90759343 + 14.8 0.000 intron (NM_001320421, intron 3 of 20) intron (NM_001320421, intron 3 of 20) 57179 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr14-883 chr14 100835928 100836138 + 14.8 0.000 intron (NR_033359, intron 5 of 7) intron (NR_033359, intron 5 of 7) 9901 NR_003531 55384 Hs.654863 NR_002766 ENSG00000214548 MEG3 FP504|GTL2|LINC00023|NCRNA00023|PRO0518|PRO2160|onco-lncRNA-83|prebp1 maternally expressed 3 ncRNA chr17-1866 chr17 32659508 32659718 + 14.8 0.000 intron (NM_015194, intron 16 of 21) intron (NM_015194, intron 16 of 21) 172620 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr9-1041 chr9 134496664 134496874 + 14.8 0.000 Intergenic Intergenic 90209 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr6-2160 chr6 17611788 17611998 + 14.8 0.000 TTS (NM_016255) TTS (NM_016255) 11591 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr1-4068 chr1 212161377 212161587 + 14.8 0.000 Intergenic Intergenic 73254 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr8-1427 chr8 107402145 107402355 + 14.8 0.000 intron (NM_001199859, intron 1 of 8) intron (NM_001199859, intron 1 of 8) -65735 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr16-1806 chr16 23354475 23354685 + 14.8 0.000 intron (NM_000336, intron 3 of 12) intron (NM_000336, intron 3 of 12) 52278 NM_000336 6338 Hs.414614 NM_000336 ENSG00000168447 SCNN1B BESC1|ENaCb|ENaCbeta|LIDLS1|SCNEB sodium channel epithelial 1 beta subunit protein-coding chr1-3260 chr1 207393700 207393910 + 14.8 0.000 Intergenic LTR3B_|LTR|ERVK -60495 NM_001006658 1380 Hs.445757 NM_001877 ENSG00000117322 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement C3d receptor 2 protein-coding chr3-2121 chr3 58333500 58333710 + 14.8 0.000 intron (NM_001349498, intron 1 of 17) intron (NM_001349498, intron 1 of 17) 299 NM_001349498 54899 Hs.190544 NM_017771 ENSG00000168297 PXK MONAKA|SLOB PX domain containing serine/threonine kinase like protein-coding chr13-1031 chr13 63028482 63028692 + 14.8 0.000 Intergenic Intergenic -221228 NR_120403 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr2-3323 chr2 158926659 158926869 + 14.7 0.000 Intergenic AluSq|SINE|Alu -41870 NM_001350064 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr1-2543 chr1 8880105 8880315 + 14.7 0.000 TTS (NR_038351) TTS (NR_038351) 1375 NR_038351 100505975 Hs.429843 NR_038351 ENSG00000230679 ENO1-AS1 - ENO1 antisense RNA 1 ncRNA chr4-1666 chr4 138953908 138954118 + 14.7 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 58633 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr9-1733 chr9 124364718 124364928 + 14.7 0.000 intron (NM_002799, intron 6 of 7) intron (NM_002799, intron 6 of 7) 11350 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr12-453 chr12 49623088 49623298 + 14.7 0.000 promoter-TSS (NM_012272) promoter-TSS (NM_012272) -221 NM_001031698 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr19-1716 chr19 46443047 46443257 + 14.7 0.000 Intergenic Intergenic 28411 NM_001103149 55228 Hs.8395 NM_018215 ENSG00000182013 PNMA8A PNMAL1 PNMA family member 8A protein-coding chr15-711 chr15 40454669 40454879 + 14.7 0.000 intron (NR_125372, intron 1 of 4) intron (NR_125372, intron 1 of 4) 13821 NR_125372 22893 Hs.22109 NM_014952 ENSG00000140320 BAHD1 - bromo adjacent homology domain containing 1 protein-coding chr7-883 chr7 130356088 130356298 + 14.7 0.000 intron (NM_080385, intron 5 of 12) intron (NM_080385, intron 5 of 12) 10934 NR_133928 105375504 Hs.436058 NR_133928 LOC105375504 - uncharacterized LOC105375504 ncRNA chr12-2537 chr12 100248913 100249123 + 14.7 0.000 intron (NM_001319311, intron 8 of 10) intron (NM_001319311, intron 8 of 10) 18061 NM_001319311 120863 Hs.653118 NM_152317 ENSG00000166153 DEPDC4 DEP.4 DEP domain containing 4 protein-coding chr1-3608 chr1 27979794 27980004 + 14.7 0.000 intron (NM_001282562, intron 15 of 16) intron (NM_001282562, intron 15 of 16) 20437 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr7-2182 chr7 81767965 81768175 + 14.7 0.000 intron (NM_001010933, intron 1 of 7) Tigger19a|DNA|TcMar-Tigger 1977 NM_001010934 3082 Hs.396530 NM_000601 ENSG00000019991 HGF DFNB39|F-TCF|HGFB|HPTA|SF hepatocyte growth factor protein-coding chr17-964 chr17 78351550 78351760 + 14.7 0.000 Intergenic Intergenic 8424 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr3-896 chr3 69013498 69013708 + 14.7 0.000 promoter-TSS (NM_173654) promoter-TSS (NM_173654) 81 NR_103826 285203 Hs.518059 NM_173654 ENSG00000163378 EOGT AER61|AOS4|C3orf64|EOGT1 EGF domain specific O-linked N-acetylglucosamine transferase protein-coding chr8-575 chr8 117592937 117593147 + 14.7 0.000 Intergenic Intergenic 72329 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr15-638 chr15 92801582 92801792 + 14.7 0.000 Intergenic Intergenic 6203 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr6-1294 chr6 155782533 155782743 + 14.7 0.000 Intergenic MER31B|LTR|ERV1 -164159 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr15-1536 chr15 63063537 63063747 + 14.7 0.000 intron (NM_001018006, intron 8 of 8) intron (NM_001018006, intron 8 of 8) -14255 NR_147233 111064646 Hs.602995 NR_147233 TPM1-AS TPM1-AS1 TPM1 antisense RNA ncRNA chr7-1464 chr7 100053194 100053404 + 14.7 0.000 intron (NM_001362780, intron 2 of 4) intron (NM_001362780, intron 2 of 4) 3505 NM_001362780 7589 Hs.632294 NM_145914 ENSG00000166529 ZSCAN21 NY-REN-21|ZNF38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding chr9-1448 chr9 135749614 135749824 + 14.7 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 47534 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr5-2156 chr5 102756001 102756211 + 14.7 0.000 intron (NR_157231, intron 1 of 14) MIRc|SINE|MIR 801 NM_001364590 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr11-2234 chr11 69019011 69019221 + 14.7 0.000 TTS (NR_120541) TTS (NR_120541) -5734 NM_001098515 116535 Hs.118513 NM_145015 ENSG00000172935 MRGPRF GPR140|GPR168|MRGF|RTA MAS related GPR family member F protein-coding chr11-2088 chr11 102810969 102811179 + 14.7 0.000 intron (NR_038390, intron 4 of 7) intron (NR_038390, intron 4 of 7) -12914 NM_002421 4312 Hs.83169 NM_002421 ENSG00000196611 MMP1 CLG|CLGN matrix metallopeptidase 1 protein-coding chr1-4692 chr1 230987153 230987363 + 14.7 0.000 intron (NR_144538, intron 1 of 6) MER44C|DNA|TcMar-Tigger 8164 NM_001346992 64801 Hs.275736 NM_022786 ENSG00000173409 ARV1 EIEE38 ARV1 homolog, fatty acid homeostasis modulator protein-coding chr1-3591 chr1 12314339 12314549 + 14.7 0.000 intron (NM_015378, intron 30 of 69) intron (NM_015378, intron 30 of 69) 84414 NM_015378 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr16-1664 chr16 67445864 67446074 + 14.7 0.000 intron (NM_004691, intron 2 of 7) intron (NM_004691, intron 2 of 7) 14848 NM_000196 3291 Hs.1376 NM_000196 ENSG00000176387 HSD11B2 AME|AME1|HSD11K|HSD2|SDR9C3 hydroxysteroid 11-beta dehydrogenase 2 protein-coding chr1-2949 chr1 83554291 83554501 + 14.7 0.000 Intergenic Intergenic 108342 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr10-2015 chr10 67944188 67944398 + 14.7 0.000 intron (NM_022079, intron 20 of 25) L1M1|LINE|L1 52891 NM_001314049 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr6-2325 chr6 112592202 112592412 + 14.7 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 244977 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr11-1718 chr11 77522336 77522546 + 14.7 0.000 Intergenic MER61-int|LTR|ERV1 -48378 NM_001128620 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr11-2503 chr11 67451252 67451462 + 14.7 0.000 TTS (NM_206997) TTS (NM_206997) -1046 NM_001300896 57010 Hs.143036 NM_145200 ENSG00000175544 CABP4 CRSD|CSNB2B calcium binding protein 4 protein-coding chr3-432 chr3 129688382 129688592 + 14.7 0.000 exon (NM_001349272, exon 1 of 4) exon (NM_001349272, exon 1 of 4) 245 NM_001349272 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr4-1022 chr4 8260787 8260997 + 14.7 0.000 Intergenic Intergenic -8862 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr21-472 chr21 43956662 43956872 + 14.7 0.000 intron (NM_001037553, intron 1 of 8) MLT1F1|LTR|ERVL-MaLR 31369 NM_001037553 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr1-2710 chr1 230113972 230114182 + 14.7 0.000 intron (NM_004481, intron 1 of 15) intron (NM_004481, intron 1 of 15) 46839 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr1-2171 chr1 31626686 31626896 + 14.7 0.000 exon (NM_001525, exon 9 of 9) exon (NM_001525, exon 9 of 9) 9091 NM_001525 3061 Hs.388226 NM_001525 ENSG00000121764 HCRTR1 OX1R hypocretin receptor 1 protein-coding chr17-2053 chr17 57935159 57935369 + 14.7 0.000 intron (NM_001271875, intron 1 of 10) Tigger19b|DNA|TcMar-Tigger 20148 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr13-657 chr13 47838004 47838214 + 14.7 0.000 Intergenic MIR|SINE|MIR 94513 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr1-2574 chr1 32349285 32349495 + 14.7 0.000 Intergenic Intergenic 12853 NM_001167676 100128071 Hs.512763 NM_001167676 ENSG00000225828 FAM229A - family with sequence similarity 229 member A protein-coding chr18-685 chr18 76446966 76447176 + 14.7 0.000 intron (NM_014643, intron 2 of 6) intron (NM_014643, intron 2 of 6) -44581 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr17-3072 chr17 81938761 81938971 + 14.7 0.000 TTS (NM_001145113) TTS (NM_001145113) -1538 NM_001330523 5831 Hs.163451 NM_006907 ENSG00000183010 PYCR1 ARCL2B|ARCL3B|P5C|P5CR|PIG45|PP222|PRO3|PYCR pyrroline-5-carboxylate reductase 1 protein-coding chr14-1758 chr14 76201284 76201494 + 14.7 0.000 intron (NR_110314, intron 9 of 9) intron (NR_110314, intron 9 of 9) 47035 NM_017972 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr11-2308 chr11 64856628 64856838 + 14.7 0.000 intron (NM_006795, intron 3 of 4) intron (NM_006795, intron 3 of 4) -12080 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr22-808 chr22 37188694 37188904 + 14.7 0.000 promoter-TSS (NM_182486) promoter-TSS (NM_182486) -552 NM_182486 114904 Hs.22011 NM_031910 ENSG00000133466 C1QTNF6 CTFP6|CTRP6|ZACRP6 C1q and TNF related 6 protein-coding chr15-831 chr15 37877994 37878204 + 14.7 0.000 Intergenic Intergenic -56508 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr9-1698 chr9 98119291 98119501 + 14.7 0.000 promoter-TSS (NM_014788) promoter-TSS (NM_014788) -174 NM_014788 9830 Hs.575631 NM_014788 ENSG00000106785 TRIM14 - tripartite motif containing 14 protein-coding chr22-953 chr22 36077316 36077526 + 14.7 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -48597 NM_001082578 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr7-1714 chr7 2002889 2003099 + 14.7 0.000 intron (NM_001013837, intron 13 of 18) intron (NM_001013837, intron 13 of 18) -62423 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr7-2487 chr7 6897661 6897871 + 14.7 0.000 Intergenic Intergenic -71471 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr3-1832 chr3 63705336 63705546 + 14.7 0.000 Intergenic LTR16B2|LTR|ERVL 52766 NM_001080537 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr3-2000 chr3 197103124 197103334 + 14.7 0.000 intron (NM_001366216, intron 13 of 23) intron (NM_001366216, intron 13 of 23) -73412 NM_033316 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chr22-700 chr22 39384351 39384561 + 14.7 0.000 3' UTR (NM_004711, exon 4 of 4) 3' UTR (NM_004711, exon 4 of 4) -15324 NM_006116 10454 Hs.507681 NM_006116 ENSG00000100324 TAB1 3'-Tab1|MAP3K7IP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 protein-coding chr15-125 chr15 90233993 90234203 + 14.7 0.000 promoter-TSS (NM_006384) promoter-TSS (NM_006384) -51 NM_001277764 10519 Hs.715556 NM_006384 ENSG00000185043 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 protein-coding chr8-2865 chr8 137578821 137579031 + 14.7 0.000 Intergenic L2a|LINE|L2 -165338 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr1-5627 chr1 20982362 20982572 + 14.7 0.000 intron (NM_001198802, intron 5 of 34) intron (NM_001198802, intron 5 of 34) 5965 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr7-685 chr7 138891173 138891383 + 14.7 0.000 intron (NM_020910, intron 10 of 19) intron (NM_020910, intron 10 of 19) 90111 NM_001164665 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr12-872 chr12 52871336 52871546 + 14.7 0.000 Intergenic Intergenic -22447 NM_173352 196374 Hs.665267 NM_173352 ENSG00000170423 KRT78 CK-78|K5B|K78|Kb40 keratin 78 protein-coding chr15-1237 chr15 70508751 70508961 + 14.7 0.000 Intergenic MIRb|SINE|MIR -2928 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr2-3963 chr2 69360594 69360804 + 14.7 0.000 intron (NM_002056, intron 4 of 18) AluJo|SINE|Alu 26528 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr3-1622 chr3 46947372 46947582 + 14.7 0.000 intron (NM_144716, intron 2 of 7) intron (NM_144716, intron 2 of 7) 29024 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chrX-448 chrX 105191912 105192122 + 14.7 0.000 intron (NM_017416, intron 2 of 10) MamSINE1|SINE|tRNA-RTE 28676 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr11-2108 chr11 124882509 124882719 + 14.7 0.000 Intergenic Intergenic 5800 NM_001370366 64221 Hs.435621 NM_022370 ENSG00000154134 ROBO3 HGPPS|HGPPS1|HGPS|RBIG1|RIG1 roundabout guidance receptor 3 protein-coding chr3-2214 chr3 27906397 27906607 + 14.7 0.000 Intergenic LTR78|LTR|ERV1 -72366 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr4-1303 chr4 118174068 118174278 + 14.7 0.000 intron (NM_004784, intron 6 of 13) intron (NM_004784, intron 6 of 13) -104589 NR_003584 100093630 Hs.535762 NR_003584 ENSG00000269893 SNHG8 LINC00060|NCRNA00060 small nucleolar RNA host gene 8 ncRNA chr6-1144 chr6 158744976 158745186 + 14.7 0.000 intron (NM_001242394, intron 11 of 17) MIRb|SINE|MIR 19672 NR_037482 100500851 NR_037482 ENSG00000265558 MIR3918 mir-3918 microRNA 3918 ncRNA chr3-1993 chr3 171830107 171830317 + 14.7 0.000 Intergenic Intergenic -13137 NM_001164436 389177 Hs.642307 NM_001164436 ENSG00000186329 TMEM212 - transmembrane protein 212 protein-coding chrX-562 chrX 40083702 40083912 + 14.7 0.000 intron (NM_001123384, intron 1 of 13) CpG 13659 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr17-2166 chr17 48961547 48961757 + 14.7 0.000 intron (NM_004123, intron 4 of 5) intron (NM_004123, intron 4 of 5) 6944 NM_004123 2695 Hs.1454 NM_004123 ENSG00000159224 GIP - gastric inhibitory polypeptide protein-coding chr9-1988 chr9 122778685 122778895 + 14.7 0.000 Intergenic MER5A1|DNA|hAT-Charlie -10143 NM_001001923 392391 Hs.534761 NM_001001923 ENSG00000148215 OR5C1 OR5C2P|OR9-31|OR9-F olfactory receptor family 5 subfamily C member 1 protein-coding chr3-1661 chr3 171351707 171351917 + 14.7 0.000 intron (NR_027767, intron 2 of 2) intron (NR_027767, intron 2 of 2) 108593 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr1-1997 chr1 18954943 18955153 + 14.7 0.000 intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) 1628 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr9-1565 chr9 28007006 28007216 + 14.7 0.000 intron (NM_001354574, intron 5 of 5) intron (NM_001354574, intron 5 of 5) -433245 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr13-265 chr13 33350121 33350331 + 14.7 0.000 intron (NM_001243476, intron 5 of 17) CpG -14960 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr1-2691 chr1 206772259 206772469 + 14.7 0.000 exon (NM_000572, exon 1 of 5) exon (NM_000572, exon 1 of 5) 130 NM_000572 3586 Hs.193717 NM_000572 ENSG00000136634 IL10 CSIF|GVHDS|IL-10|IL10A|TGIF interleukin 10 protein-coding chr14-877 chr14 89304134 89304344 + 14.7 0.000 intron (NM_001085471, intron 3 of 6) intron (NM_001085471, intron 3 of 6) 112994 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr11-3386 chr11 130124187 130124397 + 14.7 0.000 intron (NM_001243299, intron 7 of 16) intron (NM_001243299, intron 7 of 16) -35490 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr1-3364 chr1 100622252 100622462 + 14.7 0.000 Intergenic Intergenic 24647 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr1-3111 chr1 40339796 40340006 + 14.7 0.000 Intergenic L2b|LINE|L2 -22615 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr1-3223 chr1 178818507 178818717 + 14.7 0.000 intron (NM_152663, intron 6 of 19) intron (NM_152663, intron 6 of 19) 52465 NM_004673 9068 Hs.591474 NM_004673 ENSG00000116194 ANGPTL1 ANG3|ANGPT3|ARP1|AngY|UNQ162|dJ595C2.2 angiopoietin like 1 protein-coding chr14-586 chr14 55580195 55580405 + 14.7 0.000 promoter-TSS (NM_001271014) promoter-TSS (NM_001271014) 93 NM_001079521 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding chr11-4404 chr11 82508220 82508430 + 14.7 0.000 Intergenic Intergenic -104412 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr17-1609 chr17 76557650 76557860 + 14.7 0.000 promoter-TSS (NR_038108) promoter-TSS (NR_038108) -9 NR_038109 100507246 Hs.288215 NR_038108 ENSG00000163597 SNHG16 Nbla10727|Nbla12061|ncRAN small nucleolar RNA host gene 16 ncRNA chr2-4616 chr2 147989869 147990079 + 14.7 0.000 intron (NM_001190879, intron 1 of 14) intron (NM_001190879, intron 1 of 14) 30763 NM_001190882 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr15-714 chr15 42736271 42736481 + 14.7 0.000 exon (NM_138477, exon 2 of 28) exon (NM_138477, exon 2 of 28) 752 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr11-2543 chr11 86152335 86152545 + 14.7 0.000 Intergenic Intergenic -82580 NM_001206947 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr1-3931 chr1 91851231 91851441 + 14.7 0.000 intron (NR_036634, intron 2 of 17) intron (NR_036634, intron 2 of 17) 34815 NR_036634 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr14-1286 chr14 95880187 95880397 + 14.7 0.000 intron (NR_038861, intron 1 of 1) intron (NR_038861, intron 1 of 1) 3520 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr15-938 chr15 84003062 84003272 + 14.7 0.000 intron (NM_207517, intron 23 of 29) AluJo|SINE|Alu -77020 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr3-1324 chr3 48568611 48568821 + 14.7 0.000 intron (NM_000094, intron 103 of 117) intron (NM_000094, intron 103 of 117) -4935 NM_033199 90226 Hs.631914 NM_033199 ENSG00000145040 UCN2 SRP|UCN-II|UCNI|UR|URP urocortin 2 protein-coding chr3-3594 chr3 67384275 67384485 + 14.7 0.000 intron (NM_003848, intron 10 of 10) MER58A|DNA|hAT-Charlie 158916 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr5-1760 chr5 9869793 9870003 + 14.7 0.000 intron (NR_027112, intron 4 of 12) intron (NR_027112, intron 4 of 12) 15521 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA chr5-308 chr5 14871948 14872158 + 14.7 0.000 promoter-TSS (NM_054027) promoter-TSS (NM_054027) -275 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr20-1259 chr20 40489840 40490050 + 14.7 0.000 Intergenic ERVL-E-int|LTR|ERVL 199291 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr10-1012 chr10 123800209 123800419 + 14.7 0.000 intron (NM_198148, intron 4 of 13) intron (NM_198148, intron 4 of 13) 91493 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr19-2010 chr19 42407174 42407384 + 14.7 0.000 exon (NM_005357, exon 6 of 10) exon (NM_005357, exon 6 of 10) 10131 NR_073180 100996307 Hs.466840 NR_073179 ENSG00000213904 LIPE-AS1 - LIPE antisense RNA 1 ncRNA chr11-1576 chr11 121025184 121025394 + 14.7 0.000 intron (NM_152715, intron 1 of 7) intron (NM_152715, intron 1 of 7) 1217 NM_001363644 219899 Hs.504136 NM_152715 ENSG00000154114 TBCEL El|LRRC35 tubulin folding cofactor E like protein-coding chr4-1095 chr4 168833383 168833593 + 14.7 0.000 intron (NM_001367567, intron 1 of 11) intron (NM_001367567, intron 1 of 11) 1393 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr2-2285 chr2 38741213 38741423 + 14.7 0.000 Intergenic AluJb|SINE|Alu 10043 NM_001031684 6432 Hs.309090 NM_006276 ENSG00000115875 SRSF7 9G8|AAG3|SFRS7 serine and arginine rich splicing factor 7 protein-coding chr17-2436 chr17 7734301 7734511 + 14.7 0.000 intron (NM_020877, intron 6 of 85) intron (NM_020877, intron 6 of 85) 16662 NM_001303270 146754 Hs.367649 NM_020877 ENSG00000183914 DNAH2 DNAHC2|DNHD3 dynein axonemal heavy chain 2 protein-coding chr18-1323 chr18 74946181 74946391 + 14.7 0.000 intron (NM_017757, intron 7 of 7) intron (NM_017757, intron 7 of 7) 259227 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr3-2290 chr3 104604378 104604588 + 14.7 0.000 Intergenic LTR16C|LTR|ERVL -762230 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr6-1066 chr6 22147985 22148195 + 14.7 0.000 promoter-TSS (NR_034143) promoter-TSS (NR_034143) -897 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr9-1147 chr9 437509 437719 + 14.7 0.000 intron (NM_001193536, intron 38 of 46) intron (NM_001193536, intron 38 of 46) -32677 NM_001256876 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr6-1213 chr6 56375081 56375291 + 14.7 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) 18942 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr11-1372 chr11 75565691 75565901 + 14.7 0.000 intron (NM_001207014, intron 2 of 5) intron (NM_001207014, intron 2 of 5) 3543 NM_001235 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr2-4291 chr2 233817745 233817955 + 14.7 0.000 intron (NM_001367507, intron 27 of 41) intron (NM_001367507, intron 27 of 41) 36685 NM_018410 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding chr16-3092 chr16 67378836 67379046 + 14.7 0.000 intron (NM_018296, intron 12 of 13) intron (NM_018296, intron 12 of 13) 14557 NM_015964 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr19-685 chr19 2032420 2032630 + 14.7 0.000 Intergenic G-rich|Low_complexity|Low_complexity -16811 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr19-2234 chr19 45601881 45602091 + 14.7 0.000 intron (NM_005282, intron 1 of 1) CpG 226 NM_005282 2828 Hs.17170 NM_005282 ENSG00000177464 GPR4 - G protein-coupled receptor 4 protein-coding chr7-1459 chr7 95421586 95421796 + 14.7 0.000 intron (NM_000305, intron 2 of 8) intron (NM_000305, intron 2 of 8) 13337 NM_000305 5445 Hs.514420 NM_000305 ENSG00000105854 PON2 - paraoxonase 2 protein-coding chr11-579 chr11 124739815 124740025 + 14.7 0.000 promoter-TSS (NM_006176) promoter-TSS (NM_006176) -22 NM_006176 4900 Hs.524116 NM_006176 ENSG00000154146 NRGN RC3|hng neurogranin protein-coding chr1-3383 chr1 193905428 193905638 + 14.7 0.000 Intergenic Intergenic 600788 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr22-490 chr22 19844551 19844761 + 14.7 0.000 intron (NM_053004, intron 2 of 7) intron (NM_053004, intron 2 of 7) 10218 NM_024627 79680 Hs.105642 NM_024627 ENSG00000215012 RTL10 BOP|C22orf29 retrotransposon Gag like 10 protein-coding chrX-276 chrX 51892384 51892594 + 14.7 0.000 intron (NM_001005332, intron 1 of 12) intron (NM_001005332, intron 1 of 12) -1134 NM_001005333 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr7-1174 chr7 16544106 16544316 + 14.7 0.000 intron (NM_001195280, intron 3 of 8) intron (NM_001195280, intron 3 of 8) 17386 NM_001195280 100506049 Hs.278036 NM_001195280 ENSG00000205858 LRRC72 - leucine rich repeat containing 72 protein-coding chr12-1569 chr12 120375440 120375650 + 14.7 0.000 Intergenic MIRc|SINE|MIR -6381 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chrX-569 chrX 49107035 49107245 + 14.7 0.000 Intergenic Intergenic -6019 NM_007075 11152 Hs.632807 NM_007075 ENSG00000196998 WDR45 JM5|NBIA4|NBIA5|WDRX1|WIPI-4|WIPI4 WD repeat domain 45 protein-coding chr10-2768 chr10 124213562 124213772 + 14.7 0.000 Intergenic MIR|SINE|MIR -120069 NM_001270764 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr19-2324 chr19 22929007 22929217 + 14.7 0.000 Intergenic BSR/Beta|Satellite|Satellite 74064 NM_001267716 388523 Hs.616766 NM_001267716 ENSG00000269067 ZNF728 - zinc finger protein 728 protein-coding chr17-2043 chr17 46942851 46943061 + 14.7 0.000 TTS (NM_004287) TTS (NM_004287) 19796 NR_148351 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr10-1149 chr10 99369194 99369404 + 14.7 0.000 intron (NM_001345889, intron 7 of 10) intron (NM_001345889, intron 7 of 10) 39943 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr14-787 chr14 68278634 68278844 + 14.7 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 350048 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr2-4208 chr2 204103847 204104057 + 14.7 0.000 Intergenic Intergenic 167204 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr3-1305 chr3 177554977 177555187 + 14.7 0.000 intron (NR_047568, intron 2 of 3) intron (NR_047568, intron 2 of 3) 113161 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr3-1543 chr3 191330012 191330222 + 14.7 0.000 intron (NM_178335, intron 1 of 11) intron (NM_178335, intron 1 of 11) 419 NM_198152 257313 Hs.518492 NM_198152 ENSG00000188958 UTS2B U2B|URP|UTS2D urotensin 2B protein-coding chr2-2704 chr2 40284764 40284974 + 14.7 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 145435 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr6-1391 chr6 111427571 111427781 + 14.7 0.000 intron (NM_002912, intron 2 of 32) L1M3f|LINE|L1 -55796 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr3-1086 chr3 161568201 161568411 + 14.7 0.000 Intergenic Intergenic 71498 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr4-1201 chr4 84938411 84938621 + 14.7 0.000 intron (NM_014991, intron 1 of 67) intron (NM_014991, intron 1 of 67) -27100 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr8-927 chr8 23366409 23366619 + 14.7 0.000 TTS (NR_038323) TTS (NR_038323) 30306 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr5-518 chr5 138439060 138439270 + 14.7 0.000 non-coding (NR_073449, exon 1 of 8) non-coding (NR_073449, exon 1 of 8) 108 NR_073449 51308 Hs.416090 NM_016606 ENSG00000132563 REEP2 C5orf19|SGC32445|SPG72|Yip2d receptor accessory protein 2 protein-coding chr15-2465 chr15 84593454 84593664 + 14.7 0.000 Intergenic MER77B|LTR|ERVL -7450 NM_017894 54993 Hs.594023 NM_017894 ENSG00000176371 ZSCAN2 ZFP29|ZNF854 zinc finger and SCAN domain containing 2 protein-coding chr9-2554 chr9 131901553 131901763 + 14.7 0.000 intron (NM_004269, intron 4 of 7) intron (NM_004269, intron 4 of 7) -161714 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr7-2291 chr7 52078102 52078312 + 14.7 0.000 Intergenic Intergenic -684951 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr13-932 chr13 78137749 78137959 + 14.7 0.000 intron (NR_047001, intron 1 of 5) intron (NR_047001, intron 1 of 5) 82999 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr11-3094 chr11 28108059 28108269 + 14.7 0.000 promoter-TSS (NM_031217) promoter-TSS (NM_031217) -8 NM_031217 81930 Hs.301052 NM_031217 ENSG00000121621 KIF18A MS-KIF18A|PPP1R99 kinesin family member 18A protein-coding chr17-1918 chr17 75734782 75734992 + 14.7 0.000 intron (NM_001005619, intron 12 of 38) intron (NM_001005619, intron 12 of 38) 10191 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr1-3734 chr1 235270646 235270856 + 14.7 0.000 intron (NR_135074, intron 2 of 24) intron (NR_135074, intron 2 of 24) 56736 NM_001206794 51742 Hs.575782 NM_016374 ENSG00000054267 ARID4B BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180 AT-rich interaction domain 4B protein-coding chr8-1781 chr8 80091680 80091890 + 14.7 0.000 intron (NM_001025253, intron 1 of 7) MER5A1|DNA|hAT-Charlie -10954 NM_001287142 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr6-1637 chr6 113352633 113352843 + 14.7 0.000 Intergenic Intergenic 80709 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr1-1974 chr1 183633734 183633944 + 14.7 0.000 intron (NM_001270439, intron 1 of 3) intron (NM_001270439, intron 1 of 3) 1944 NM_005717 10092 Hs.518609 NM_005717 ENSG00000162704 ARPC5 ARC16|dJ127C7.3|p16-Arc actin related protein 2/3 complex subunit 5 protein-coding chr12-3350 chr12 91423551 91423761 + 14.7 0.000 Intergenic Intergenic -240839 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr5-958 chr5 138754097 138754307 + 14.7 0.000 promoter-TSS (NR_134245) promoter-TSS (NR_134245) -278 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr1-5816 chr1 214957328 214957538 + 14.7 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -48109 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr7-1371 chr7 111198218 111198428 + 14.7 0.000 intron (NM_032549, intron 3 of 5) MIRb|SINE|MIR 107196 NM_018334 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr6-1883 chr6 124962789 124962999 + 14.7 0.000 exon (NM_001286398, exon 1 of 6) exon (NM_001286398, exon 1 of 6) 133 NR_026876 7955 Hs.544438 NR_026876 ENSG00000236548 RNF217-AS1 STL RNF217 antisense RNA 1 (head to head) ncRNA chr1-2600 chr1 62622040 62622250 + 14.7 0.000 intron (NM_001367561, intron 12 of 49) MLT1H|LTR|ERVL-MaLR 24625 NM_014495 27329 Hs.209153 NM_014495 ENSG00000132855 ANGPTL3 ANG-5|ANGPT5|ANL3|FHBL2 angiopoietin like 3 protein-coding chr20-614 chr20 13492039 13492249 + 14.7 0.000 intron (NR_136631, intron 10 of 13) intron (NR_136631, intron 10 of 13) 146788 NM_017714 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr6-825 chr6 134475089 134475299 + 14.7 0.000 non-coding (NR_125852, exon 2 of 5) non-coding (NR_125852, exon 2 of 5) 3703 NR_125852 101928231 Hs.634168 NR_125852 CT69 - cancer/testis associated transcript 69 ncRNA chr15-518 chr15 39976595 39976805 + 14.7 0.000 exon (NM_001013703, exon 12 of 39) exon (NM_001013703, exon 12 of 39) 42585 NM_001013703 440275 Hs.656673 NM_001013703 ENSG00000128829 EIF2AK4 GCN2|PVOD2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding chr9-495 chr9 127224956 127225166 + 14.7 0.000 Intergenic CpG -38601 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr11-1958 chr11 130801856 130802066 + 14.7 0.000 Intergenic Intergenic 60149 NR_125383 100507431 Hs.375101 NR_125383 LINC02551 - long intergenic non-protein coding RNA 2551 ncRNA chr5-1963 chr5 103224624 103224834 + 14.7 0.000 Intergenic L1PA17|LINE|L1 -34034 NM_033211 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr10-1118 chr10 112919741 112919951 + 14.7 0.000 Intergenic Intergenic -30401 NM_001146283 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr20-627 chr20 39661898 39662108 + 14.7 0.000 Intergenic L3|LINE|CR1 -342458 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr3-984 chr3 4772111 4772321 + 14.7 0.000 intron (NM_001168272, intron 45 of 60) intron (NM_001168272, intron 45 of 60) -20626 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr4-1340 chr4 174284241 174284451 + 14.7 0.000 promoter-TSS (NM_012180) promoter-TSS (NM_012180) -95 NM_012180 26269 Hs.76917 NM_012180 ENSG00000164117 FBXO8 DC10|FBS|FBX8 F-box protein 8 protein-coding chr17-1885 chr17 48588570 48588780 + 14.7 0.000 Intergenic Intergenic -1745 NR_033202 404266 Hs.660088 NR_033201 ENSG00000233101 HOXB-AS3 - HOXB cluster antisense RNA 3 ncRNA chr17-733 chr17 63699135 63699345 + 14.7 0.000 intron (NM_030576, intron 2 of 4) intron (NM_030576, intron 2 of 4) 885 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr12-1064 chr12 122917725 122917935 + 14.7 0.000 Intergenic Intergenic -21706 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr4-1700 chr4 169185674 169185884 + 14.7 0.000 intron (NM_020870, intron 2 of 11) LTR85c|LTR|Gypsy? 85177 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr17-2253 chr17 16013876 16014086 + 14.7 0.000 intron (NM_017775, intron 7 of 9) MLT1L|LTR|ERVL-MaLR 14157 NM_001271420 54902 Hs.462316 NM_017775 ENSG00000011295 TTC19 2010204O13Rik|MC3DN2 tetratricopeptide repeat domain 19 protein-coding chr7-851 chr7 41886992 41887202 + 14.7 0.000 Intergenic Intergenic -184007 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr12-1213 chr12 132031057 132031267 + 14.7 0.000 promoter-TSS (NR_002979) promoter-TSS (NR_002979) -62 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr11-1226 chr11 61783805 61784015 + 14.7 0.000 exon (NM_001127392, exon 24 of 27) exon (NM_001127392, exon 24 of 27) 8651 NR_030342 693196 NR_030342 ENSG00000284108 MIR611 MIRN611|hsa-mir-611 microRNA 611 ncRNA chr9-1451 chr9 136694478 136694688 + 14.7 0.000 Intergenic CpG -7126 NM_001012727 10555 Hs.320151 NM_006412 ENSG00000169692 AGPAT2 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 protein-coding chr19-1846 chr19 11560640 11560850 + 14.7 0.000 Intergenic Intergenic -1509 NM_032377 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding chr1-5165 chr1 164719138 164719348 + 14.7 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 55398 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr2-1642 chr2 27191530 27191740 + 14.7 0.000 Intergenic Intergenic -20396 NM_080592 51374 Hs.9527 NM_016085 ENSG00000138085 ATRAID APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18 all-trans retinoic acid induced differentiation factor protein-coding chr5-1902 chr5 159133120 159133330 + 14.7 0.000 Intergenic Intergenic 32742 NR_109890 101927740 Hs.738721 NR_109890 ENSG00000245812 LINC02202 - long intergenic non-protein coding RNA 2202 ncRNA chr16-2546 chr16 30553179 30553389 + 14.7 0.000 TTS (NM_001172679) TTS (NM_001172679) 5090 NM_033410 92595 Hs.132227 NM_033410 ENSG00000169951 ZNF764 - zinc finger protein 764 protein-coding chr19-974 chr19 649994 650204 + 14.7 0.000 intron (NM_194460, intron 5 of 8) intron (NM_194460, intron 5 of 8) 10173 NM_020637 27006 Hs.248087 NM_020637 ENSG00000070388 FGF22 - fibroblast growth factor 22 protein-coding chr17-2005 chr17 82613541 82613751 + 14.7 0.000 TTS (NM_019613) TTS (NM_019613) 34798 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr4-1107 chr4 13966414 13966624 + 14.7 0.000 Intergenic Intergenic -145449 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr12-850 chr12 127485605 127485815 + 14.7 0.000 Intergenic HERVE-int|LTR|ERV1 -145638 NR_110057 101927616 Hs.637827 NR_110057 ENSG00000256362 LINC02375 - long intergenic non-protein coding RNA 2375 ncRNA chr8-1009 chr8 141874242 141874452 + 14.7 0.000 Intergenic Intergenic -88034 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr10-413 chr10 21534065 21534275 + 14.7 0.000 promoter-TSS (NR_136736) promoter-TSS (NR_136736) -2 NM_001195626 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr21-161 chr21 45542316 45542526 + 14.7 0.000 promoter-TSS (NM_194255) promoter-TSS (NM_194255) 19 NM_194255 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr12-518 chr12 27780207 27780417 + 14.7 0.000 promoter-TSS (NM_020782) promoter-TSS (NM_020782) 79 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr15-1680 chr15 52337323 52337533 + 14.7 0.000 intron (NM_001142495, intron 31 of 39) intron (NM_001142495, intron 31 of 39) -41624 NM_018728 55930 Hs.487036 NM_018728 ENSG00000128833 MYO5C - myosin VC protein-coding chr4-2102 chr4 48699883 48700093 + 14.7 0.000 intron (NM_015030, intron 2 of 63) intron (NM_015030, intron 2 of 63) 80311 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chr10-1614 chr10 63671451 63671661 + 14.7 0.000 Intergenic Intergenic -149666 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr2-3081 chr2 111209141 111209351 + 14.7 0.000 intron (NR_015395, intron 5 of 6) intron (NR_015395, intron 5 of 6) 88332 NM_138623 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr15-485 chr15 34101757 34101967 + 14.7 0.000 promoter-TSS (NM_020154) promoter-TSS (NM_020154) 0 NM_020154 56851 Hs.160565 NM_020154 ENSG00000134153 EMC7 C11orf3|C15orf24|HT022|ORF1-FL1 ER membrane protein complex subunit 7 protein-coding chr10-1835 chr10 28800095 28800305 + 14.7 0.000 intron (NR_120652, intron 2 of 3) intron (NR_120652, intron 2 of 3) -4150 NR_038374 100507605 Hs.119207 NR_038374 ENSG00000235824 LINC00837 - long intergenic non-protein coding RNA 837 ncRNA chr5-1056 chr5 132677217 132677427 + 14.7 0.000 intron (NM_000589, intron 2 of 3) intron (NM_000589, intron 2 of 3) 3333 NM_000589 3565 Hs.73917 NM_000589 ENSG00000113520 IL4 BCGF-1|BCGF1|BSF-1|BSF1|IL-4 interleukin 4 protein-coding chr9-2149 chr9 121213325 121213535 + 14.7 0.000 intron (NM_001353054, intron 5 of 25) intron (NM_001353054, intron 5 of 25) -11561 NM_016322 51552 Hs.371563 NM_016322 ENSG00000119396 RAB14 FBP|RAB-14 RAB14, member RAS oncogene family protein-coding chr15-607 chr15 67065580 67065790 + 14.7 0.000 promoter-TSS (NM_005902) promoter-TSS (NM_005902) 83 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr3-2670 chr3 42376481 42376691 + 14.7 0.000 Intergenic MamRep605|LTR?|LTR? 34024 NM_144634 131375 Hs.234895 NM_144634 ENSG00000157093 LYZL4 LYC4|LYZA lysozyme like 4 protein-coding chr5-851 chr5 96661957 96662167 + 14.7 0.000 promoter-TSS (NM_001042440) promoter-TSS (NM_001042440) 25 NM_001042442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr20-239 chr20 63520461 63520671 + 14.7 0.000 promoter-TSS (NM_001353423) promoter-TSS (NM_001353423) -175 NR_148427 79144 Hs.79625 NM_024299 ENSG00000125534 PPDPF C20orf149|dJ697K14.9|exdpf pancreatic progenitor cell differentiation and proliferation factor protein-coding chr1-4088 chr1 224900290 224900500 + 14.7 0.000 Intergenic Intergenic -29259 NM_144989 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr3-2079 chr3 4582705 4582915 + 14.7 0.000 intron (NM_001168272, intron 4 of 60) intron (NM_001168272, intron 4 of 60) 89462 NM_002222 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr1-1930 chr1 11013095 11013305 + 14.7 0.000 intron (NM_007375, intron 1 of 5) intron (NM_007375, intron 1 of 5) 578 NM_007375 23435 Hs.300624 NM_007375 ENSG00000120948 TARDBP ALS10|TDP-43 TAR DNA binding protein protein-coding chr17-2927 chr17 49290817 49291027 + 14.7 0.000 non-coding (NR_135579, exon 8 of 8) non-coding (NR_135579, exon 8 of 8) -2468 NR_106745 102465137 NR_106745 ENSG00000273500 MIR6129 hsa-mir-6129 microRNA 6129 ncRNA chr15-921 chr15 66936070 66936280 + 14.7 0.000 intron (NR_135687, intron 2 of 2) intron (NR_135687, intron 2 of 2) 20340 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr18-450 chr18 49398315 49398525 + 14.7 0.000 intron (NM_001353210, intron 2 of 16) MLT1O|LTR|ERVL-MaLR 62225 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr12-1401 chr12 124401880 124402090 + 14.7 0.000 intron (NM_001077261, intron 16 of 47) intron (NM_001077261, intron 16 of 47) -64743 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr2-2961 chr2 27855476 27855686 + 14.7 0.000 intron (NM_022128, intron 2 of 7) intron (NM_022128, intron 2 of 7) -33128 NM_001329112 9577 Hs.258314 NM_004899 ENSG00000158019 BABAM2 BRCC4|BRCC45|BRE BRISC and BRCA1 A complex member 2 protein-coding chr3-2652 chr3 16136211 16136421 + 14.7 0.000 Intergenic Intergenic -38364 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr5-1670 chr5 54904431 54904641 + 14.7 0.000 Intergenic Intergenic 81057 NM_001135604 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr9-2161 chr9 125646818 125647028 + 14.7 0.000 intron (NM_001006619, intron 4 of 10) intron (NM_001006619, intron 4 of 10) 60285 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr6-1832 chr6 157536101 157536311 + 14.7 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 7074 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr3-1902 chr3 154758402 154758612 + 14.7 0.000 Intergenic Intergenic -265617 NM_001354642 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr1-5585 chr1 3377845 3378055 + 14.7 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -76715 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr16-3892 chr16 75470189 75470399 + 14.7 0.000 Intergenic L2a|LINE|L2 -5557 NM_001304998 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding chr13-694 chr13 33494922 33495132 + 14.7 0.000 intron (NM_001243476, intron 4 of 17) intron (NM_001243476, intron 4 of 17) -159761 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr12-1304 chr12 132792881 132793091 + 14.7 0.000 intron (NM_001172557, intron 11 of 15) CpG -31154 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr18-650 chr18 39455410 39455620 + 14.7 0.000 intron (NR_024391, intron 3 of 3) MLT1H|LTR|ERVL-MaLR 166660 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr4-1596 chr4 24664981 24665191 + 14.7 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -80532 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr1-2521 chr1 229508187 229508397 + 14.7 0.000 promoter-TSS (NM_018230) promoter-TSS (NM_018230) 49 NM_018230 55746 Hs.12457 NM_018230 ENSG00000069248 NUP133 GAMOS8|NPHS18|hNUP133 nucleoporin 133 protein-coding chr20-1310 chr20 61608412 61608622 + 14.7 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 8756 NM_001252339 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr2-2179 chr2 19738488 19738698 + 14.7 0.000 Intergenic Intergenic -130261 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr8-1791 chr8 96521456 96521666 + 14.7 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) 27748 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr11-2048 chr11 68209227 68209437 + 14.7 0.000 intron (NR_161380, intron 1 of 10) L2a|LINE|L2 3964 NM_001369424 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr5-1066 chr5 159209609 159209819 + 14.7 0.000 promoter-TSS (NM_001199383) promoter-TSS (NM_001199383) -161 NM_001199383 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chr4-1109 chr4 24226291 24226501 + 14.7 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) 246509 NR_148987 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr17-2282 chr17 30273432 30273642 + 14.7 0.000 intron (NM_000386, intron 7 of 11) intron (NM_000386, intron 7 of 11) 18407 NM_000386 642 Hs.371914 NM_000386 ENSG00000108578 BLMH BH|BMH bleomycin hydrolase protein-coding chr6-2896 chr6 12638046 12638256 + 14.7 0.000 Intergenic Intergenic -52747 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr8-2012 chr8 100714080 100714290 + 14.7 0.000 intron (NM_002568, intron 4 of 14) intron (NM_002568, intron 4 of 14) 7903 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr13-555 chr13 20797011 20797221 + 14.7 0.000 intron (NM_022459, intron 16 of 22) intron (NM_022459, intron 16 of 22) -23155 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr7-1556 chr7 29095773 29095983 + 14.7 0.000 intron (NM_001371256, intron 8 of 16) intron (NM_001371256, intron 8 of 16) -29155 NR_120523 101928168 Hs.666750 NR_120523 ENSG00000285412 LOC101928168 - uncharacterized LOC101928168 ncRNA chr1-1251 chr1 180502411 180502621 + 14.7 0.000 promoter-TSS (NM_032360) promoter-TSS (NM_032360) 61 NM_032360 84320 Hs.200051 NM_032360 ENSG00000230124 ACBD6 - acyl-CoA binding domain containing 6 protein-coding chr3-1048 chr3 192918023 192918233 + 14.7 0.000 promoter-TSS (NM_178496) promoter-TSS (NM_178496) -272 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr1-3061 chr1 15749708 15749918 + 14.7 0.000 promoter-TSS (NR_149050) promoter-TSS (NR_149050) 77 NR_149050 110806303 Hs.615589 NR_149050 ENSG00000224459 SLC25A34-AS1 - SLC25A34 and TMEM82 antisense RNA 1 ncRNA chr13-940 chr13 97005696 97005906 + 14.7 0.000 Intergenic Intergenic -11071 NM_001346195 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding chr7-1718 chr7 2787699 2787909 + 14.7 0.000 intron (NM_007353, intron 2 of 3) MLT1J1|LTR|ERVL-MaLR -24664 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr11-1683 chr11 59706948 59707158 + 14.7 0.000 Intergenic LTR3|LTR|ERVK 6792 NM_001005324 390201 Hs.589001 NM_001005324 ENSG00000172289 OR10V1 OR11-256 olfactory receptor family 10 subfamily V member 1 protein-coding chr2-1127 chr2 27717174 27717384 + 14.7 0.000 intron (NR_160725, intron 2 of 2) intron (NR_160725, intron 2 of 2) 1156 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr2-1808 chr2 47069874 47070084 + 14.7 0.000 intron (NM_001288951, intron 20 of 20) intron (NM_001288951, intron 20 of 20) 85329 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr9-2769 chr9 108851061 108851271 + 14.7 0.000 Intergenic Intergenic 4820 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr16-1610 chr16 80027162 80027372 + 14.7 0.000 Intergenic Intergenic 232018 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr18-455 chr18 2578754 2578964 + 14.7 0.000 intron (NM_006101, intron 5 of 16) intron (NM_006101, intron 5 of 16) 7302 NM_006101 10403 Hs.414407 NM_006101 ENSG00000080986 NDC80 HEC|HEC1|HsHec1|KNTC2|TID3|hsNDC80 NDC80 kinetochore complex component protein-coding chr17-1715 chr17 56186469 56186679 + 14.7 0.000 intron (NM_001365758, intron 2 of 20) intron (NM_001365758, intron 2 of 20) 33099 NM_001365758 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr14-1592 chr14 91048916 91049126 + 14.7 0.000 intron (NM_182398, intron 1 of 12) intron (NM_182398, intron 1 of 12) 11103 NM_001322237 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr1-3774 chr1 6359707 6359917 + 14.7 0.000 promoter-TSS (NM_181866) promoter-TSS (NM_181866) -883 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr7-1380 chr7 130054327 130054537 + 14.7 0.000 Intergenic Intergenic -2981 NM_016478 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 HSPC216|NIPA zinc finger C3HC-type containing 1 protein-coding chr12-1266 chr12 57514943 57515153 + 14.7 0.000 exon (NM_004990, exon 17 of 21) exon (NM_004990, exon 17 of 21) 2360 NR_106816 102465454 NR_106816 ENSG00000284152 MIR6758 hsa-mir-6758 microRNA 6758 ncRNA chr2-956 chr2 69742127 69742337 + 14.7 0.000 promoter-TSS (NM_001320702) promoter-TSS (NM_001320702) 98 NM_001365496 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr3-2946 chr3 57977993 57978203 + 14.7 0.000 Intergenic Intergenic -30324 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr17-671 chr17 19248935 19249145 + 14.7 0.000 intron (NM_001102664, intron 1 of 7) intron (NM_001102664, intron 1 of 7) 11663 NM_148921 22905 Hs.743983 NM_014964 ENSG00000072134 EPN2 EHB21 epsin 2 protein-coding chr1-1213 chr1 230067088 230067298 + 14.7 0.000 promoter-TSS (NR_120373) promoter-TSS (NR_120373) -2 NR_120373 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr8-1102 chr8 48111686 48111896 + 14.7 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 103360 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr13-574 chr13 42992197 42992407 + 14.7 0.000 promoter-TSS (NM_001330543) promoter-TSS (NM_001330543) -61 NM_001330543 94240 Hs.546467 NM_033255 ENSG00000133106 EPSTI1 BRESI1 epithelial stromal interaction 1 protein-coding chr10-3139 chr10 64071273 64071483 + 14.7 0.000 Intergenic L1PA17|LINE|L1 -549488 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr22-1737 chr22 21779039 21779249 + 14.7 0.000 intron (NM_002745, intron 6 of 8) intron (NM_002745, intron 6 of 8) -43350 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr3-1927 chr3 187286703 187286913 + 14.7 0.000 intron (NM_139125, intron 1 of 10) intron (NM_139125, intron 1 of 10) -4464 NR_135551 101929130 NR_135551 ENSG00000283175 LOC101929130 - uncharacterized LOC101929130 ncRNA chr6-2992 chr6 42214840 42215050 + 14.7 0.000 intron (NM_018141, intron 1 of 6) intron (NM_018141, intron 1 of 6) 2916 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr22-947 chr22 17773697 17773907 + 14.7 0.000 5' UTR (NM_001244572, exon 1 of 4) 5' UTR (NM_001244572, exon 1 of 4) 240 NM_197966 637 Hs.591054 NM_001196 ENSG00000015475 BID FP497 BH3 interacting domain death agonist protein-coding chr3-2108 chr3 47443359 47443569 + 14.7 0.000 intron (NM_012235, intron 1 of 22) intron (NM_012235, intron 1 of 22) 32477 NM_001320044 22937 Hs.531789 NM_012235 ENSG00000114650 SCAP - SREBF chaperone protein-coding chr1-2428 chr1 7334747 7334957 + 14.7 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) 54902 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr13-757 chr13 93700145 93700355 + 14.7 0.000 intron (NM_005708, intron 2 of 8) intron (NM_005708, intron 2 of 8) 158223 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr4-1157 chr4 107349302 107349512 + 14.7 0.000 Intergenic Intergenic -313094 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr18-182 chr18 57848425 57848635 + 14.7 0.000 Intergenic AluJr|SINE|Alu -45215 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr10-1897 chr10 115950436 115950646 + 14.7 0.000 Intergenic Intergenic 244248 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr10-1335 chr10 99946146 99946356 + 14.7 0.000 intron (NR_024130, intron 2 of 4) AluSz|SINE|Alu -15344 NM_001318326 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr10-4243 chr10 131948098 131948308 + 14.7 0.000 intron (NM_018461, intron 8 of 8) intron (NM_018461, intron 8 of 8) 33810 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr14-592 chr14 71113492 71113702 + 14.7 0.000 3' UTR (NM_001308160, exon 34 of 34) 3' UTR (NM_001308160, exon 34 of 34) 206138 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr2-3268 chr2 11833713 11833923 + 14.7 0.000 Intergenic Intergenic 3168 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA chr18-1473 chr18 59593344 59593554 + 14.7 0.000 intron (NM_133459, intron 2 of 10) Tigger19a|DNA|TcMar-Tigger 103974 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr12-2056 chr12 104493936 104494146 + 14.7 0.000 intron (NM_018413, intron 1 of 2) AluJo|SINE|Alu 37093 NM_001173982 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr16-1222 chr16 85523371 85523581 + 14.7 0.000 Intergenic Intergenic -87933 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr4-1863 chr4 176478132 176478342 + 14.7 0.000 Intergenic Intergenic 158271 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr10-737 chr10 70387658 70387868 + 14.7 0.000 Intergenic MER63A|DNA|hAT-Blackjack -5113 NM_001278214 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 - leucine rich repeat containing 20 protein-coding chr17-1429 chr17 4511175 4511385 + 14.7 0.000 intron (NM_001124758, intron 1 of 12) L2c|LINE|L2 12399 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr2-3309 chr2 120589838 120590048 + 14.7 0.000 Intergenic LTR40b|LTR|ERVL -123594 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr18-552 chr18 57413974 57414184 + 14.7 0.000 Intergenic L1MD1|LINE|L1 -21295 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr13-943 chr13 97367417 97367627 + 14.7 0.000 intron (NM_144778, intron 8 of 8) intron (NM_144778, intron 8 of 8) -66647 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr3-3905 chr3 46930338 46930548 + 14.7 0.000 intron (NM_144716, intron 3 of 7) intron (NM_144716, intron 3 of 7) 46058 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr6-1063 chr6 16910161 16910371 + 14.7 0.000 Intergenic LTR81B|LTR|Gypsy -148776 NM_001128164 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr12-2882 chr12 28869160 28869370 + 14.7 0.000 Intergenic Intergenic -280013 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr14-296 chr14 56118222 56118432 + 14.7 0.000 promoter-TSS (NM_021255) promoter-TSS (NM_021255) -84 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr4-940 chr4 107211249 107211459 + 14.7 0.000 Intergenic Intergenic -175041 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr9-2242 chr9 33650547 33650757 + 14.7 0.000 Intergenic Intergenic 26427 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr6-794 chr6 157912360 157912570 + 14.7 0.000 intron (NM_016224, intron 9 of 17) intron (NM_016224, intron 9 of 17) -69398 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr5-866 chr5 157516137 157516347 + 14.7 0.000 intron (NM_033274, intron 7 of 22) intron (NM_033274, intron 7 of 22) -56142 NR_136205 102724404 Hs.570889 NR_136204 LOC102724404 - uncharacterized LOC102724404 ncRNA chr11-2518 chr11 72263338 72263548 + 14.7 0.000 Intergenic Intergenic -19267 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding GL000225.1-8 GL000225.1 14313 14523 + 14.7 0.000 NA NA NA NA chr1-3244 chr1 201786870 201787080 + 14.7 0.000 intron (NM_020443, intron 9 of 29) intron (NM_020443, intron 9 of 29) -21636 NR_031599 100302158 NR_031599 ENSG00000221028 MIR1231 MIRN1231|hsa-mir-1231 microRNA 1231 ncRNA chr6-888 chr6 104326495 104326705 + 14.7 0.000 Intergenic L2a|LINE|L2 532946 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr9-1475 chr9 111287292 111287502 + 14.7 0.000 Intergenic Intergenic -16183 NR_106989 102465800 NR_106989 ENSG00000274263 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA chr5-2093 chr5 10725104 10725314 + 14.7 0.000 intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 36025 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr3-1940 chr3 196406873 196407083 + 14.7 0.000 intron (NM_015562, intron 2 of 10) intron (NM_015562, intron 2 of 10) -24407 NR_046745 100874034 Hs.617990 NR_046745 UBXN7-AS1 - UBXN7 antisense RNA 1 ncRNA chr15-1154 chr15 68588286 68588496 + 14.7 0.000 intron (NM_006091, intron 1 of 11) intron (NM_006091, intron 1 of 11) 9398 NM_006091 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr1-3649 chr1 77511365 77511575 + 14.7 0.000 intron (NM_012093, intron 10 of 13) intron (NM_012093, intron 10 of 13) 171188 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr17-1047 chr17 81899304 81899514 + 14.7 0.000 exon (NM_001002244, exon 3 of 4) exon (NM_001002244, exon 3 of 4) -2829 NM_148896 256933 Hs.569843 NM_148896 ENSG00000183979 NPB L7|PPL7|PPNPB neuropeptide B protein-coding chr16-1898 chr16 87745150 87745360 + 14.7 0.000 intron (NM_001351938, intron 4 of 10) intron (NM_001351938, intron 4 of 10) 20731 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr2-809 chr2 156341607 156341817 + 14.7 0.000 non-coding (NR_147695, exon 1 of 1) non-coding (NR_147695, exon 1 of 1) 408 NR_147695 440918 Hs.641142 NR_147695 FLJ46875 - uncharacterized LOC440918 ncRNA chr11-1247 chr11 86069731 86069941 + 14.7 0.000 promoter-TSS (NM_001206947) promoter-TSS (NM_001206947) 24 NM_001206947 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chrX-411 chrX 137094865 137095075 + 14.7 0.000 Intergenic Intergenic -63296 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr8-834 chr8 99606403 99606613 + 14.7 0.000 intron (NM_017890, intron 33 of 61) AluYm1|SINE|Alu -69647 NR_030596 100126309 NR_030596 ENSG00000216069 MIR875 MIRN875|hsa-mir-875 microRNA 875 ncRNA chr4-1661 chr4 124530768 124530978 + 14.7 0.000 intron (NR_110838, intron 5 of 8) intron (NR_110838, intron 5 of 8) 27561 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr20-372 chr20 63553426 63553636 + 14.7 0.000 promoter-TSS (NM_001319152) promoter-TSS (NM_001319152) 511 NM_024059 79025 Hs.197755 NM_024059 ENSG00000125531 FNDC11 C20orf195 fibronectin type III domain containing 11 protein-coding chr5-1478 chr5 91101796 91102006 + 14.7 0.000 intron (NR_003149, intron 86 of 89) intron (NR_003149, intron 86 of 89) 212501 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr7-1567 chr7 73886500 73886710 + 14.7 0.000 Intergenic Intergenic 25446 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr3-4651 chr3 35808754 35808964 + 14.7 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 64383 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr5-1311 chr5 72452186 72452396 + 14.7 0.000 intron (NM_152625, intron 3 of 4) intron (NM_152625, intron 3 of 4) 55119 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr17-2185 chr17 67258033 67258243 + 14.7 0.000 intron (NR_136398, intron 1 of 3) intron (NR_136398, intron 1 of 3) -12942 NM_001330447 9931 Hs.370140 NM_014877 ENSG00000198265 HELZ DHRC|DRHC|HUMORF5 helicase with zinc finger protein-coding chr8-1290 chr8 47513708 47513918 + 14.7 0.000 intron (NM_001352958, intron 10 of 21) intron (NM_001352958, intron 10 of 21) -140275 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr9-934 chr9 35665129 35665339 + 14.7 0.000 promoter-TSS (NM_032818) promoter-TSS (NM_032818) -39 NM_032818 84904 Hs.534579 NM_032818 ENSG00000137135 ARHGEF39 C9orf100 Rho guanine nucleotide exchange factor 39 protein-coding chr11-3057 chr11 8693963 8694173 + 14.7 0.000 3' UTR (NM_213618, exon 20 of 20) 3' UTR (NM_213618, exon 20 of 20) 8629 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr3-2953 chr3 61908490 61908700 + 14.7 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 347024 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr12-868 chr12 48789016 48789226 + 14.7 0.000 promoter-TSS (NM_015270) promoter-TSS (NM_015270) -26 NR_110019 100506125 Hs.306727 NR_110019 ENSG00000257660 ADCY6-DT - ADCY6 divergent transcript ncRNA chr11-1745 chr11 122038720 122038930 + 14.7 0.000 intron (NR_137178, intron 3 of 4) intron (NR_137178, intron 3 of 4) 61019 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr3-2161 chr3 141442096 141442306 + 14.7 0.000 intron (NM_001350099, intron 5 of 5) intron (NM_001350099, intron 5 of 5) 39852 NM_001350100 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr21-380 chr21 29258622 29258832 + 14.7 0.000 intron (NR_027072, intron 1 of 1) MIRb|SINE|MIR -40195 NM_001186 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding chr20-376 chr20 4686217 4686427 + 14.7 0.000 promoter-TSS (NM_001080121) promoter-TSS (NM_001080121) -134 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr14-537 chr14 20971610 20971820 + 14.7 0.000 Intergenic CpG 16228 NM_002934 6036 Hs.728 NM_002934 ENSG00000169385 RNASE2 EDN|RAF3|RNS2 ribonuclease A family member 2 protein-coding chr15-507 chr15 45186410 45186620 + 14.7 0.000 intron (NM_138356, intron 2 of 7) intron (NM_138356, intron 2 of 7) 1451 NM_001301170 90525 Hs.310399 NM_138356 ENSG00000138606 SHF - Src homology 2 domain containing F protein-coding chr1-4389 chr1 165202878 165203088 + 14.7 0.000 3' UTR (NM_001174069, exon 9 of 9) 3' UTR (NM_001174069, exon 9 of 9) 153258 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr1-4306 chr1 31639892 31640102 + 14.7 0.000 intron (NM_012392, intron 1 of 4) intron (NM_012392, intron 1 of 4) 4620 NM_001359651 553115 Hs.470417 NM_012392 ENSG00000162517 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding chr22-411 chr22 12693715 12693925 + 14.7 0.000 Intergenic CpG 796414 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr17-1995 chr17 77466272 77466482 + 14.7 0.000 intron (NM_001293698, intron 1 of 9) intron (NM_001293698, intron 1 of 9) -8866 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr5-1707 chr5 120446091 120446301 + 14.7 0.000 Intergenic LTR33A|LTR|ERVL -18082 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr7-3079 chr7 1640263 1640473 + 14.7 0.000 Intergenic AluJb|SINE|Alu 25898 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr11-1331 chr11 126318011 126318221 + 14.7 0.000 intron (NM_014026, intron 2 of 5) intron (NM_014026, intron 2 of 5) 14056 NM_014026 28960 Hs.504249 NM_014026 ENSG00000110063 DCPS ARS|DCS1|HINT-5|HINT5|HSL1|HSPC015 decapping enzyme, scavenger protein-coding chr13-1920 chr13 64007614 64007824 + 14.7 0.000 intron (NR_145420, intron 2 of 5) intron (NR_145420, intron 2 of 5) 68292 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr2-1283 chr2 109322224 109322434 + 14.7 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -8704 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr1-2791 chr1 226268895 226269105 + 14.7 0.000 intron (NM_001366239, intron 7 of 13) MER68|LTR|ERVL 40164 NM_001366245 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr17-2857 chr17 29252720 29252930 + 14.7 0.000 intron (NM_005208, intron 4 of 5) L3|LINE|CR1 5968 NM_005208 1411 Hs.46275 NM_005208 ENSG00000108255 CRYBA1 CRYB1|CTRCT10 crystallin beta A1 protein-coding chr15-756 chr15 63986785 63986995 + 14.7 0.000 intron (NM_014326, intron 2 of 11) intron (NM_014326, intron 2 of 11) 58616 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr6-657 chr6 48068817 48069027 + 14.7 0.000 promoter-TSS (NM_001013732) promoter-TSS (NM_001013732) -233 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr1-1639 chr1 183349250 183349460 + 14.7 0.000 intron (NM_015039, intron 1 of 10) intron (NM_015039, intron 1 of 10) -44481 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr12-2926 chr12 68557405 68557615 + 14.7 0.000 Intergenic Intergenic -53389 NM_001251918 5908 Hs.369920 NM_015646 ENSG00000127314 RAP1B K-REV|RAL1B RAP1B, member of RAS oncogene family protein-coding chr18-443 chr18 12879998 12880208 + 14.7 0.000 intron (NM_080423, intron 1 of 8) L2a|LINE|L2 4134 NM_002828 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase non-receptor type 2 protein-coding KI270589.1-1 KI270589.1 43003 43213 + 14.7 0.000 NA NA NA NA chr4-906 chr4 118685393 118685603 + 14.7 0.000 promoter-TSS (NR_125930) promoter-TSS (NR_125930) 106 NM_020961 57721 Hs.596872 NM_020961 ENSG00000145388 METTL14 hMETTL14 methyltransferase like 14 protein-coding chr15-799 chr15 64154253 64154463 + 14.7 0.000 intron (NR_073534, intron 6 of 6) intron (NR_073534, intron 6 of 6) 2627 NR_073534 79856 Hs.744250 NM_024798 ENSG00000157734 SNX22 - sorting nexin 22 protein-coding chr10-1129 chr10 133329905 133330115 + 14.7 0.000 intron (NM_001321617, intron 1 of 5) CpG 6886 NM_015722 50632 Hs.148680 NM_015722 ENSG00000130643 CALY DRD1IP|NSG3 calcyon neuron specific vesicular protein protein-coding chr7-639 chr7 5556705 5556915 + 14.7 0.000 Intergenic Intergenic -26209 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr11-1872 chr11 919192 919402 + 14.7 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -4239 NM_001142675 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr6-1871 chr6 71419629 71419839 + 14.7 0.000 intron (NR_026807, intron 1 of 3) intron (NR_026807, intron 1 of 3) 1011 NR_121612 79940 Hs.368337 NR_026807 ENSG00000233237 LINC00472 C6orf155|P53RRA long intergenic non-protein coding RNA 472 ncRNA chr16-1453 chr16 82990265 82990475 + 14.7 0.000 promoter-TSS (NR_110937) promoter-TSS (NR_110937) -72 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr1-3279 chr1 227344179 227344389 + 14.7 0.000 Intergenic Intergenic -25792 NM_001366011 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr11-1933 chr11 75350454 75350664 + 14.6 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 1102 NM_020251 408 Hs.503284 NM_004041 ENSG00000137486 ARRB1 ARB1|ARR1 arrestin beta 1 protein-coding chr1-2134 chr1 241357132 241357342 + 14.6 0.000 promoter-TSS (NM_001282773) promoter-TSS (NM_001282773) -7 NM_001282773 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr1-7305 chr1 245954798 245955008 + 14.6 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 462509 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr6-1283 chr6 111602043 111602253 + 14.6 0.000 non-coding (NR_034108, exon 4 of 4) non-coding (NR_034108, exon 4 of 4) 3730 NM_147686 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr19-1570 chr19 2778473 2778683 + 14.6 0.000 intron (NM_003021, intron 1 of 11) intron (NM_003021, intron 1 of 11) 4695 NM_003021 6449 Hs.203910 NM_003021 ENSG00000104969 SGTA SGT|alphaSGT|hSGT small glutamine rich tetratricopeptide repeat containing alpha protein-coding chr14-1022 chr14 36853259 36853469 + 14.6 0.000 intron (NM_001171170, intron 2 of 10) intron (NM_001171170, intron 2 of 10) 99027 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr2-3155 chr2 196113605 196113815 + 14.6 0.000 Intergenic Intergenic -44873 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr5-4082 chr5 62073889 62074099 + 14.6 0.000 Intergenic Intergenic -232168 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr6-2128 chr6 3743866 3744076 + 14.6 0.000 intron (NM_183373, intron 1 of 4) intron (NM_183373, intron 1 of 4) 8041 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr11-2437 chr11 33546158 33546368 + 14.6 0.000 intron (NM_012194, intron 3 of 20) intron (NM_012194, intron 3 of 20) 154477 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr1-2938 chr1 54250140 54250350 + 14.6 0.000 intron (NM_001009955, intron 8 of 16) intron (NM_001009955, intron 8 of 16) 13802 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr15-928 chr15 70902161 70902371 + 14.6 0.000 intron (NM_017691, intron 4 of 15) intron (NM_017691, intron 4 of 15) 9823 NM_001363732 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr4-759 chr4 4150973 4151183 + 14.6 0.000 Intergenic LTR5A|LTR|ERVK 75816 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr1-5854 chr1 1008296 1008506 + 14.6 0.000 Intergenic L1MD|LINE|L1 -5096 NM_005101 9636 Hs.458485 NM_005101 ENSG00000187608 ISG15 G1P2|IFI15|IMD38|IP17|UCRP|hUCRP ISG15 ubiquitin like modifier protein-coding chr1-1419 chr1 19765935 19766145 + 14.6 0.000 intron (NM_001349112, intron 5 of 14) intron (NM_001349112, intron 5 of 14) 33309 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr15-570 chr15 90320034 90320244 + 14.6 0.000 Intergenic Intergenic 29308 NR_028287 23766 Hs.592014 NR_028287 GABARAPL3 ATG8D GABA type A receptor associated protein like 3 pseudogene pseudo chr2-3187 chr2 215329156 215329366 + 14.6 0.000 intron (NM_004044, intron 7 of 15) intron (NM_004044, intron 7 of 15) 17202 NM_004044 471 Hs.90280 NM_004044 ENSG00000138363 ATIC AICAR|AICARFT|HEL-S-70p|IMPCHASE|PURH 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding chr14-1387 chr14 48937937 48938147 + 14.6 0.000 Intergenic Intergenic 648338 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr3-1939 chr3 195908180 195908390 + 14.6 0.000 non-coding (NR_145450, exon 1 of 2) non-coding (NR_145450, exon 1 of 2) 209 NR_145450 100128262 Hs.605240 NR_145450 TNK2-AS1 - TNK2 antisense RNA 1 ncRNA chr3-5138 chr3 53597927 53598137 + 14.6 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 103421 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr5-1346 chr5 179219455 179219665 + 14.6 0.000 intron (NM_014244, intron 3 of 21) intron (NM_014244, intron 3 of 21) 125901 NM_014244 9509 Hs.23871 NM_014244 ENSG00000087116 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif 2 protein-coding chr2-3665 chr2 174578034 174578244 + 14.6 0.000 intron (NM_001077269, intron 3 of 7) MER20|DNA|hAT-Charlie -20067 NR_104088 101954278 NR_104088 ENSG00000202337 RNU6-8 U6-8 RNA, U6 small nuclear 8 snRNA chr22-354 chr22 37746140 37746350 + 14.6 0.000 promoter-TSS (NM_007032) promoter-TSS (NM_007032) 11 NM_007032 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr2-2589 chr2 238582244 238582454 + 14.6 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -26850 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr16-1344 chr16 70524084 70524294 + 14.6 0.000 promoter-TSS (NM_001195139) promoter-TSS (NM_001195139) 373 NM_012426 23450 Hs.514435 NM_012426 ENSG00000189091 SF3B3 RSE1|SAP130|SF3b130|STAF130 splicing factor 3b subunit 3 protein-coding chr5-3257 chr5 100006348 100006558 + 14.6 0.000 Intergenic Intergenic 381801 NR_027503 100133050 Hs.534796 NR_027503 LOC100133050 - glucuronidase beta pseudogene pseudo chr1-3419 chr1 1046794 1047004 + 14.6 0.000 exon (NM_001305275, exon 19 of 39) exon (NM_001305275, exon 19 of 39) -12835 NR_148960 100288175 Hs.713286 NR_148960 ENSG00000217801 LOC100288175 - uncharacterized LOC100288175 ncRNA chr22-878 chr22 42990996 42991206 + 14.6 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 24048 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr21-259 chr21 37435360 37435570 + 14.6 0.000 intron (NM_001347721, intron 2 of 11) intron (NM_001347721, intron 2 of 11) 15166 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr10-1011 chr10 121459898 121460108 + 14.6 0.000 Intergenic Intergenic 71311 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr2-3107 chr2 144801883 144802093 + 14.6 0.000 intron (NR_033870, intron 2 of 4) LTR16E1|LTR|ERVL 134021 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr7-1785 chr7 78510685 78510895 + 14.6 0.000 intron (NM_001301128, intron 4 of 20) intron (NM_001301128, intron 4 of 20) 163548 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr10-839 chr10 124540267 124540477 + 14.6 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) 78549 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr22-1374 chr22 32580042 32580252 + 14.6 0.000 intron (NM_003490, intron 7 of 13) intron (NM_003490, intron 7 of 13) 104910 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr9-2091 chr9 80699442 80699652 + 14.6 0.000 Intergenic Intergenic 724524 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr3-1836 chr3 69811794 69812004 + 14.6 0.000 intron (NM_001354607, intron 2 of 10) intron (NM_001354607, intron 2 of 10) 48088 NM_006722 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr9-1576 chr9 72554260 72554470 + 14.6 0.000 intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 32564 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr4-1088 chr4 151227782 151227992 + 14.6 0.000 promoter-TSS (NM_001243349) promoter-TSS (NM_001243349) 22 NM_001243349 152503 Hs.744983 NM_001009555 ENSG00000109686 SH3D19 EBP|EVE1|Eve-1|Kryn|SH3P19 SH3 domain containing 19 protein-coding chr19-2052 chr19 5121031 5121241 + 14.6 0.000 intron (NM_015015, intron 11 of 22) intron (NM_015015, intron 11 of 22) 152023 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr8-2630 chr8 66456183 66456393 + 14.6 0.000 intron (NM_144650, intron 10 of 13) intron (NM_144650, intron 10 of 13) 23784 NM_144650 137872 Hs.720023 NM_144650 ENSG00000147576 ADHFE1 ADH8|HMFT2263|HOT alcohol dehydrogenase iron containing 1 protein-coding chr4-1083 chr4 142985266 142985476 + 14.6 0.000 Intergenic Intergenic -138836 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr10-2337 chr10 69639489 69639699 + 14.6 0.000 Intergenic Intergenic 9347 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr3-3756 chr3 5767397 5767607 + 14.6 0.000 Intergenic MamRep137|DNA|TcMar-Tigger -517247 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr16-2077 chr16 85715561 85715771 + 14.6 0.000 intron (NR_161452, intron 2 of 4) MER58A|DNA|hAT-Charlie 26034 NR_031731 100302261 NR_031731 ENSG00000283416 MIR1910 MIRN1910|hsa-mir-1910|mir-1910 microRNA 1910 ncRNA chr12-2184 chr12 3283666 3283876 + 14.6 0.000 3' UTR (NM_006675, exon 9 of 9) 3' UTR (NM_006675, exon 9 of 9) 82351 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr3-1926 chr3 185995442 185995652 + 14.6 0.000 Intergenic MIR3|SINE|MIR 35604 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr3-2802 chr3 7682891 7683101 + 14.6 0.000 intron (NM_000844, intron 9 of 9) MIRb|SINE|MIR -147712 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr7-3978 chr7 134885686 134885896 + 14.6 0.000 intron (NM_033157, intron 3 of 14) intron (NM_033157, intron 3 of 14) -5609 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr12-2616 chr12 123713572 123713782 + 14.6 0.000 intron (NM_012463, intron 1 of 19) L2a|LINE|L2 1324 NM_012463 23545 Hs.25786 NM_012463 ENSG00000185344 ATP6V0A2 A2|ARCL|ARCL2A|ATP6A2|ATP6N1D|J6B7|RTF|STV1|TJ6|TJ6M|TJ6S|VPH1|WSS ATPase H+ transporting V0 subunit a2 protein-coding chr12-1522 chr12 69528018 69528228 + 14.6 0.000 intron (NM_001278354, intron 2 of 9) intron (NM_001278354, intron 2 of 9) 12683 NR_145803 109623461 NR_145803 SNORA113 - small nucleolar RNA, H/ACA box 113 snoRNA chr20-604 chr20 57166876 57167086 + 14.6 0.000 Intergenic Intergenic -46715 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr15-962 chr15 42457886 42458096 + 14.6 0.000 promoter-TSS (NM_022473) promoter-TSS (NM_022473) -424 NM_022473 64397 Hs.511143 NM_022473 ENSG00000103994 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding chr10-1800 chr10 100771326 100771536 + 14.6 0.000 intron (NM_003988, intron 3 of 10) intron (NM_003988, intron 3 of 10) 25720 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr3-1221 chr3 89107403 89107613 + 14.6 0.000 promoter-TSS (NM_005233) promoter-TSS (NM_005233) -113 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr17-1178 chr17 47949428 47949638 + 14.6 0.000 TTS (NM_018129) TTS (NM_018129) 7962 NM_018129 55163 Hs.631742 NM_018129 ENSG00000108439 PNPO HEL-S-302|PDXPO pyridoxamine 5'-phosphate oxidase protein-coding chr10-2585 chr10 72637435 72637645 + 14.6 0.000 Intergenic LTR16A|LTR|ERVL -11349 NM_006077 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr12-715 chr12 123141733 123141943 + 14.6 0.000 Intergenic Intergenic -31349 NM_001300801 57605 Hs.272759 NM_020845 ENSG00000090975 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein membrane associated 2 protein-coding chr19-1781 chr19 43984017 43984227 + 14.6 0.000 promoter-TSS (NM_198089) promoter-TSS (NM_198089) -48 NM_001260486 7711 Hs.279567 NM_003445 ENSG00000204920 ZNF155 pHZ-96 zinc finger protein 155 protein-coding chr8-1858 chr8 13408365 13408575 + 14.6 0.000 intron (NM_024767, intron 2 of 4) intron (NM_024767, intron 2 of 4) 106381 NM_182643 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr15-801 chr15 65271005 65271215 + 14.6 0.000 intron (NM_001316943, intron 1 of 5) intron (NM_001316943, intron 1 of 5) 14481 NR_145768 109617003 NR_145768 ENSG00000206903 SNORA24B - small nucleolar RNA, H/ACA box 24B snoRNA chr5-757 chr5 167633951 167634161 + 14.6 0.000 intron (NM_001368145, intron 1 of 26) L4_A_Mam|LINE|RTE-X 60397 NM_001368146 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr14-725 chr14 62209443 62209653 + 14.6 0.000 Intergenic MER31-int|LTR|ERV1 -69575 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr3-3440 chr3 129553287 129553497 + 14.6 0.000 Intergenic Intergenic 5007 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr6-2231 chr6 44917584 44917794 + 14.6 0.000 intron (NM_001350324, intron 10 of 11) intron (NM_001350324, intron 10 of 11) 280081 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr10-2322 chr10 58608427 58608637 + 14.6 0.000 intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 95660 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr13-545 chr13 101523786 101523996 + 14.6 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 33939 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr10-1024 chr10 86668312 86668522 + 14.6 0.000 promoter-TSS (NM_001080116) promoter-TSS (NM_001080116) -94 NM_001171611 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr2-2464 chr2 101961353 101961563 + 14.6 0.000 Intergenic Intergenic -22007 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr17-2780 chr17 2531061 2531271 + 14.6 0.000 Intergenic LTR12C|LTR|ERV1 -19278 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr15-2663 chr15 76439850 76440060 + 14.6 0.000 intron (NR_148227, intron 25 of 32) intron (NR_148227, intron 25 of 32) 103182 NM_145805 64843 Hs.444677 NM_145805 ENSG00000159556 ISL2 - ISL LIM homeobox 2 protein-coding chr13-1082 chr13 60276083 60276293 + 14.6 0.000 Intergenic L1PA5|LINE|L1 -8084 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr19-1493 chr19 18700470 18700680 + 14.6 0.000 intron (NM_015321, intron 1 of 13) intron (NM_015321, intron 1 of 13) 16895 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr7-496 chr7 1001508 1001718 + 14.6 0.000 intron (NM_001134395, intron 3 of 4) intron (NM_001134395, intron 3 of 4) 18432 NM_017781 54905 Hs.272795 NM_017781 ENSG00000073067 CYP2W1 - cytochrome P450 family 2 subfamily W member 1 protein-coding chr16-756 chr16 57060708 57060918 + 14.6 0.000 intron (NM_001330552, intron 29 of 47) L2c|LINE|L2 -31770 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr6-991 chr6 2876662 2876872 + 14.6 0.000 promoter-TSS (NR_033851) promoter-TSS (NR_033851) -257 NR_033851 221756 Hs.8162 NM_182544 SERPINB9P1 SERPINB9P serpin family B member 9 pseudogene 1 pseudo chr19-1197 chr19 55643457 55643667 + 14.6 0.000 promoter-TSS (NM_016535) promoter-TSS (NM_016535) -87 NM_016535 51545 Hs.20768 NM_016535 ENSG00000171425 ZNF581 HSPC189 zinc finger protein 581 protein-coding chr10-3833 chr10 133633105 133633315 + 14.6 0.000 Intergenic Intergenic -6415 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family member B protein-coding chr5-2154 chr5 100482118 100482328 + 14.6 0.000 Intergenic MIRc|SINE|MIR -53151 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr3-1180 chr3 173912240 173912450 + 14.6 0.000 intron (NR_046664, intron 3 of 3) MIRb|SINE|MIR 8451 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr5-1051 chr5 73312550 73312760 + 14.6 0.000 Intergenic Intergenic -25251 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr4-3095 chr4 153143790 153144000 + 14.6 0.000 Intergenic Intergenic -8439 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr3-5215 chr3 79601216 79601426 + 14.6 0.000 intron (NM_002941, intron 1 of 30) L2c|LINE|L2 93434 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA chr12-1761 chr12 80553401 80553611 + 14.6 0.000 intron (NM_001145026, intron 25 of 44) intron (NM_001145026, intron 25 of 44) 109271 NM_001145026 374462 Hs.539284 NM_001145026 ENSG00000139304 PTPRQ DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q protein tyrosine phosphatase receptor type Q protein-coding chr7-2526 chr7 47845382 47845592 + 14.6 0.000 intron (NM_138295, intron 32 of 56) intron (NM_138295, intron 32 of 56) 50196 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr1-3684 chr1 161227318 161227528 + 14.6 0.000 TTS (NR_049819) TTS (NR_049819) 237 NR_049819 100847090 NR_049819 ENSG00000284035 MIR5187 mir-5187 microRNA 5187 ncRNA chr6-3451 chr6 151403762 151403972 + 14.6 0.000 TTS (NM_017909) TTS (NM_017909) -12308 NM_020861 57621 Hs.520073 NM_020861 ENSG00000181472 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding chr1-5173 chr1 168774288 168774498 + 14.6 0.000 Intergenic Intergenic -12548 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr2-4875 chr2 112235444 112235654 + 14.6 0.000 intron (NM_032494, intron 4 of 8) intron (NM_032494, intron 4 of 8) 19493 NM_032494 84524 Hs.418416 NM_032494 ENSG00000144161 ZC3H8 Fliz1|ZC3HDC8 zinc finger CCCH-type containing 8 protein-coding chr21-260 chr21 44049715 44049925 + 14.6 0.000 intron (NM_003274, intron 3 of 22) intron (NM_003274, intron 3 of 22) -24504 NM_001351709 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr18-275 chr18 74147714 74147924 + 14.6 0.000 promoter-TSS (NM_014177) promoter-TSS (NM_014177) 15 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr8-940 chr8 48735128 48735338 + 14.6 0.000 promoter-TSS (NR_157027) promoter-TSS (NR_157027) 35 NR_024605 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr2-4991 chr2 215692461 215692671 + 14.6 0.000 intron (NR_037195, intron 5 of 9) intron (NR_037195, intron 5 of 9) -25477 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr3-1211 chr3 52090272 52090482 + 14.6 0.000 intron (NM_001161580, intron 9 of 9) intron (NM_001161580, intron 9 of 9) -25265 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA chr5-1616 chr5 68898896 68899106 + 14.6 0.000 Intergenic Intergenic 130926 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr16-1817 chr16 31874552 31874762 + 14.6 0.000 intron (NR_049749, intron 1 of 4) MER57E3|LTR|ERV1 850 NM_003414 10308 Hs.460645 NM_003414 ENSG00000185947 ZNF267 HZF2 zinc finger protein 267 protein-coding chr10-2399 chr10 123009777 123009987 + 14.6 0.000 intron (NM_001609, intron 1 of 10) intron (NM_001609, intron 1 of 10) 876 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chr7-2673 chr7 8236925 8237135 + 14.6 0.000 intron (NM_001350826, intron 1 of 14) intron (NM_001350826, intron 1 of 14) 25022 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr15-964 chr15 43728598 43728808 + 14.6 0.000 Intergenic Intergenic -10443 NR_146078 554225 Hs.657395 NR_146078 ENSG00000166763 STRCP1 STRCP stereocilin pseudogene 1 pseudo chr16-1118 chr16 3065168 3065378 + 14.6 0.000 promoter-TSS (NM_004221) promoter-TSS (NM_004221) -130 NM_001012631 9235 Hs.943 NM_004221 ENSG00000008517 IL32 IL-32alpha|IL-32beta|IL-32delta|IL-32gamma|NK4|TAIF|TAIFa|TAIFb|TAIFc|TAIFd interleukin 32 protein-coding chr8-1851 chr8 421537 421747 + 14.6 0.000 intron (NM_183421, intron 2 of 10) L1MC4|LINE|L1 14684 NM_183421 26260 Hs.438454 NM_012173 ENSG00000147364 FBXO25 FBX25 F-box protein 25 protein-coding chr1-4194 chr1 61540218 61540428 + 14.6 0.000 Intergenic Intergenic -113919 NR_073400 414927 Hs.123471 NR_073400 MGC34796 - sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene pseudo chr15-1282 chr15 99558711 99558921 + 14.6 0.000 Intergenic Intergenic -6601 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr1-1829 chr1 247104487 247104697 + 14.6 0.000 promoter-TSS (NM_024804) promoter-TSS (NM_024804) 81 NR_147502 400812 Hs.558907 NR_147502 FLJ39095 - uncharacterized LOC400812 ncRNA chr1-1802 chr1 149899612 149899822 + 14.6 0.000 5' UTR (NM_001321026, exon 1 of 2) 5' UTR (NM_001321026, exon 1 of 2) 149 NM_016074 51027 Hs.13880 NM_016074 ENSG00000178096 BOLA1 CGI-143 bolA family member 1 protein-coding chr15-1012 chr15 77981676 77981886 + 14.6 0.000 Intergenic MIR1_Amn|SINE|MIR 12444 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr3-1601 chr3 192879772 192879982 + 14.6 0.000 intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) 37979 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr17-2629 chr17 4530720 4530930 + 14.6 0.000 intron (NM_001124758, intron 4 of 12) intron (NM_001124758, intron 4 of 12) 24559 NM_014520 10514 Hs.22824 NM_014520 ENSG00000132382 MYBBP1A P160|PAP2|Pol5 MYB binding protein 1a protein-coding chr3-2224 chr3 36714379 36714589 + 14.6 0.000 3' UTR (NM_033403, exon 5 of 5) 3' UTR (NM_033403, exon 5 of 5) 25377 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr1-2365 chr1 64745758 64745968 + 14.6 0.000 intron (NM_001366165, intron 1 of 11) intron (NM_001366165, intron 1 of 11) 788 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr9-1658 chr9 21591582 21591792 + 14.6 0.000 Intergenic Intergenic -31889 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr3-2630 chr3 195205367 195205577 + 14.6 0.000 intron (NM_152531, intron 2 of 3) L1MD1|LINE|L1 42448 NM_001308069 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr7-2783 chr7 74482718 74482928 + 14.6 0.000 intron (NM_016328, intron 1 of 26) L1ME3A|LINE|L1 28917 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr16-1391 chr16 85124190 85124400 + 14.6 0.000 Intergenic CpG -11823 NM_001366920 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr7-3282 chr7 24708295 24708505 + 14.6 0.000 intron (NM_004403, intron 6 of 9) intron (NM_004403, intron 6 of 9) 49064 NM_001127453 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr1-5336 chr1 228107500 228107710 + 14.6 0.000 intron (NM_181441, intron 3 of 3) intron (NM_181441, intron 3 of 3) 1694 NM_181463 128308 Hs.63236 NM_181441 ENSG00000162910 MRPL55 AAVG5835|L55nt|MRP-L55|PRO19675 mitochondrial ribosomal protein L55 protein-coding chr10-1947 chr10 15197362 15197572 + 14.6 0.000 Intergenic Intergenic -28774 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr7-1142 chr7 68980462 68980672 + 14.6 0.000 Intergenic LTR8|LTR|ERV1 617057 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr9-1093 chr9 107337688 107337898 + 14.6 0.000 Intergenic Intergenic 53024 NM_001244713 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr1-11491 chr1 115814461 115814671 + 14.6 0.000 Intergenic Intergenic 26137 NM_001111061 4808 Hs.46296 NM_005599 ENSG00000177551 NHLH2 HEN2|NSCL2|bHLHa34 nescient helix-loop-helix 2 protein-coding chr11-1478 chr11 118938546 118938756 + 14.6 0.000 Intergenic L2|LINE|L2 -17647 NM_006760 7379 Hs.379613 NM_006760 ENSG00000110375 UPK2 UP2|UPII uroplakin 2 protein-coding chr15-1056 chr15 65296231 65296441 + 14.6 0.000 TTS (NR_002756) TTS (NR_002756) 285 NR_002756 26831 NR_002756 ENSG00000199568 RNU5A-1 RNU5|RNU5A|RNU5C|U5A|U5B1 RNA, U5A small nuclear 1 snRNA chr6-967 chr6 73653320 73653530 + 14.6 0.000 intron (NM_012434, intron 1 of 10) intron (NM_012434, intron 1 of 10) 567 NM_012434 26503 Hs.597422 NM_012434 ENSG00000119899 SLC17A5 AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 member 5 protein-coding chr13-493 chr13 32530867 32531077 + 14.6 0.000 intron (NM_001278432, intron 2 of 9) MLT1F2|LTR|ERVL-MaLR 7823 NM_001320836 10443 Hs.507680 NM_014887 ENSG00000244754 N4BP2L2 92M18.3|CG005|CG016|PFAAP5 NEDD4 binding protein 2 like 2 protein-coding chr14-2003 chr14 54864676 54864886 + 14.6 0.000 intron (NM_001024071, intron 2 of 5) L1MC5a|LINE|L1 13412 NR_036194 100422984 NR_036194 ENSG00000265432 MIR4308 - microRNA 4308 ncRNA chr7-1356 chr7 55400255 55400465 + 14.6 0.000 intron (NM_018697, intron 4 of 8) MLT1J|LTR|ERVL-MaLR 34912 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr14-1041 chr14 103346832 103347042 + 14.6 0.000 Intergenic AluJo|SINE|Alu 9088 NR_002964 677811 Hs.658237 NR_002964 ENSG00000272533 SNORA28 ACA28 small nucleolar RNA, H/ACA box 28 snoRNA chr11-1749 chr11 124746771 124746981 + 14.6 0.000 TTS (NM_014312) TTS (NM_014312) 5379 NM_014312 23584 Hs.112377 NM_014312 ENSG00000019102 VSIG2 2210413P10Rik|CTH|CTXL V-set and immunoglobulin domain containing 2 protein-coding chr1-2042 chr1 212924875 212925085 + 14.6 0.000 Intergenic Intergenic -25561 NM_024749 79805 Hs.96885 NM_024749 ENSG00000143494 VASH2 - vasohibin 2 protein-coding chr11-3488 chr11 107972675 107972885 + 14.6 0.000 Intergenic Intergenic -36118 NM_003478 8065 Hs.440320 NM_003478 ENSG00000166266 CUL5 CUL-5|VACM-1|VACM1 cullin 5 protein-coding chr1-5051 chr1 93664749 93664959 + 14.6 0.000 intron (NM_001261409, intron 2 of 11) intron (NM_001261409, intron 2 of 11) 16516 NM_001261409 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr4-681 chr4 139282503 139282713 + 14.6 0.000 Intergenic Intergenic -2383 NM_032623 84709 Hs.710036 NM_032623 ENSG00000137463 MGARP C4orf49|CESP-1|HUMMR|OSAP mitochondria localized glutamic acid rich protein protein-coding chr2-1737 chr2 240468286 240468496 + 14.6 0.000 TTS (NM_002081) TTS (NM_002081) -11691 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr14-650 chr14 21085015 21085225 + 14.6 0.000 intron (NM_001278530, intron 18 of 22) intron (NM_001278530, intron 18 of 22) 13535 NM_016423 51222 Hs.250493 NM_016423 ENSG00000165804 ZNF219 ZFP219 zinc finger protein 219 protein-coding chr17-2978 chr17 66331643 66331853 + 14.6 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 29135 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr3-1822 chr3 54874968 54875178 + 14.6 0.000 non-coding (NR_046666, exon 7 of 7) non-coding (NR_046666, exon 7 of 7) 26182 NR_046666 100874237 Hs.570583 NR_046666 ENSG00000243715 CACNA2D3-AS1 - CACNA2D3 antisense RNA 1 ncRNA chr1-3401 chr1 223831794 223832004 + 14.6 0.000 intron (NM_005426, intron 1 of 18) intron (NM_005426, intron 1 of 18) 14048 NM_001031685 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr2-3411 chr2 46914791 46915001 + 14.6 0.000 promoter-TSS (NM_001288953) promoter-TSS (NM_001288953) 910 NM_001171509 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr2-3826 chr2 26575051 26575261 + 14.6 0.000 intron (NM_001322426, intron 2 of 4) intron (NM_001322426, intron 2 of 4) 12569 NM_001322426 339778 Hs.407083 NM_001105519 ENSG00000173557 C2orf70 - chromosome 2 open reading frame 70 protein-coding chr14-1765 chr14 89206501 89206711 + 14.6 0.000 intron (NM_001085471, intron 4 of 6) intron (NM_001085471, intron 4 of 6) 210627 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr6-2763 chr6 126154797 126155007 + 14.6 0.000 Intergenic Intergenic 168362 NR_146804 60487 Hs.404186 NM_021820 ENSG00000066651 TRMT11 C6orf75|MDS024|TRM11|TRMT11-1 tRNA methyltransferase 11 homolog protein-coding chr10-2032 chr10 76036548 76036758 + 14.6 0.000 intron (NM_001305581, intron 3 of 6) intron (NM_001305581, intron 3 of 6) 253892 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr18-680 chr18 68797951 68798161 + 14.6 0.000 promoter-TSS (NM_024781) promoter-TSS (NM_024781) -24 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr11-2926 chr11 67168163 67168373 + 14.6 0.000 intron (NR_027473, intron 2 of 20) intron (NR_027473, intron 2 of 20) 49005 NR_027473 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr4-1053 chr4 74583337 74583547 + 14.6 0.000 Intergenic Intergenic 138306 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr5-358 chr5 102755142 102755352 + 14.6 0.000 promoter-TSS (NM_001364593) promoter-TSS (NM_001364593) -58 NM_001364585 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr4-924 chr4 4443935 4444145 + 14.6 0.000 intron (NM_016930, intron 5 of 10) MER77|LTR|ERVL 17932 NM_001346300 53407 Hs.584913 NM_016930 ENSG00000168818 STX18 Ufe1 syntaxin 18 protein-coding chr2-885 chr2 46179266 46179476 + 14.6 0.000 intron (NM_005400, intron 14 of 14) intron (NM_005400, intron 14 of 14) -118036 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr6-1773 chr6 81265170 81265380 + 14.6 0.000 Intergenic Intergenic 487406 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr7-1304 chr7 75905874 75906084 + 14.6 0.000 Intergenic Intergenic -9176 NM_000941 5447 Hs.354056 NM_000941 ENSG00000127948 POR CPR|CYPOR|P450R cytochrome p450 oxidoreductase protein-coding chr11-2550 chr11 88838252 88838462 + 14.6 0.000 intron (NM_001143831, intron 2 of 8) intron (NM_001143831, intron 2 of 8) 209715 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr15-1648 chr15 98617146 98617356 + 14.6 0.000 Intergenic MER103C|DNA|hAT-Charlie -31288 NM_000875 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding chr4-1513 chr4 78569347 78569557 + 14.6 0.000 intron (NM_005139, intron 2 of 12) intron (NM_005139, intron 2 of 12) 17682 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr2-5311 chr2 73759216 73759426 + 14.6 0.000 Intergenic PABL_B-int|LTR|ERV1 20836 NM_003584 8446 Hs.14611 NM_003584 ENSG00000144048 DUSP11 PIR1 dual specificity phosphatase 11 protein-coding chr14-556 chr14 104768811 104769021 + 14.6 0.000 TTS (NM_005163) TTS (NM_005163) 15769 NM_006427 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr7-1783 chr7 76423519 76423729 + 14.6 0.000 intron (NM_007155, intron 1 of 8) LTR35A|LTR|ERV1 -1326 NM_001110354 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr1-8661 chr1 206009712 206009922 + 14.6 0.000 3' UTR (NM_001317331, exon 7 of 7) 3' UTR (NM_001317331, exon 7 of 7) -6422 NM_001304839 338382 Hs.534612 NM_177403 ENSG00000276600 RAB7B RAB7 RAB7B, member RAS oncogene family protein-coding chr14-1594 chr14 92376903 92377113 + 14.6 0.000 intron (NM_153647, intron 3 of 17) intron (NM_153647, intron 3 of 17) 53200 NM_153646 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr1-3640 chr1 61951835 61952045 + 14.6 0.000 intron (NM_001350145, intron 27 of 43) intron (NM_001350145, intron 27 of 43) 105865 NR_162146 113219465 NR_162146 MIR12132 - microRNA 12132 ncRNA chr9-1597 chr9 100590459 100590669 + 14.6 0.000 Intergenic Intergenic 12485 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr13-1410 chr13 29711835 29712045 + 14.6 0.000 Intergenic MER4D1|LTR|ERV1 64247 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chr2-3906 chr2 47190533 47190743 + 14.6 0.000 Intergenic Intergenic -13702 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr1-3548 chr1 226974306 226974516 + 14.6 0.000 intron (NM_020247, intron 4 of 14) intron (NM_020247, intron 4 of 14) 34117 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr12-873 chr12 53173411 53173621 + 14.6 0.000 intron (NM_001244705, intron 3 of 16) intron (NM_001244705, intron 3 of 16) 7130 NM_015989 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr15-1613 chr15 83436615 83436825 + 14.6 0.000 Intergenic Intergenic -10508 NM_001301109 6457 Hs.270055 NM_003027 ENSG00000140600 SH3GL3 CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13 SH3 domain containing GRB2 like 3, endophilin A3 protein-coding chr12-1515 chr12 58148470 58148680 + 14.6 0.000 Intergenic Intergenic 60683 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chr4-1972 chr4 158752988 158753198 + 14.6 0.000 Intergenic MIR|SINE|MIR -15933 NM_020840 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr8-1288 chr8 41256406 41256616 + 14.6 0.000 Intergenic Intergenic 14632 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr16-1039 chr16 67659692 67659902 + 14.6 0.000 intron (NM_001082486, intron 2 of 11) CpG-9845 463 NM_001082486 65057 Hs.78019 NM_022914 ENSG00000102977 ACD PIP1|PTOP|TINT1|TPP1 ACD shelterin complex subunit and telomerase recruitment factor protein-coding chr6-4087 chr6 143157312 143157522 + 14.6 0.000 intron (NM_001366353, intron 2 of 4) intron (NM_001366353, intron 2 of 4) -7365 NM_001366361 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr10-1592 chr10 31242964 31243174 + 14.6 0.000 intron (NR_134478, intron 1 of 2) intron (NR_134478, intron 1 of 2) 55186 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr4-1821 chr4 83330210 83330420 + 14.6 0.000 intron (NM_001098540, intron 1 of 11) L2|LINE|L2 4498 NM_001199830 10855 Hs.44227 NM_006665 ENSG00000173083 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding chr16-1694 chr16 1349494 1349704 + 14.6 0.000 TTS (NM_001199098) TTS (NM_001199098) 2279 NM_001001410 115939 Hs.134846 NM_001001410 ENSG00000007520 TSR3 C16orf42 TSR3 ribosome maturation factor protein-coding chr7-1843 chr7 147400331 147400541 + 14.6 0.000 intron (NM_014141, intron 9 of 22) intron (NM_014141, intron 9 of 22) -22315 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr10-1425 chr10 3811451 3811661 + 14.6 0.000 Intergenic Intergenic -22394 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr7-1841 chr7 137992871 137993081 + 14.6 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 9110 NM_194071 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr18-921 chr18 63844310 63844520 + 14.6 0.000 Intergenic Intergenic -43290 NM_001143818 5055 Hs.594481 NM_002575 ENSG00000197632 SERPINB2 HsT1201|PAI|PAI-2|PAI2|PLANH2 serpin family B member 2 protein-coding chr4-556 chr4 72569112 72569322 + 14.6 0.000 promoter-TSS (NM_014243) promoter-TSS (NM_014243) 4 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr9-2087 chr9 77943154 77943364 + 14.6 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 88552 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr17-2364 chr17 72393680 72393890 + 14.6 0.000 Intergenic Intergenic 50974 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr1-2915 chr1 22388775 22388985 + 14.6 0.000 Intergenic L2b|LINE|L2 -62971 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr17-1905 chr17 67339383 67339593 + 14.6 0.000 3' UTR (NM_001316341, exon 13 of 13) 3' UTR (NM_001316341, exon 13 of 13) 27089 NM_174871 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr1-4943 chr1 50531471 50531681 + 14.6 0.000 intron (NM_007051, intron 15 of 18) intron (NM_007051, intron 15 of 18) -108133 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr19-3371 chr19 11693826 11694036 + 14.6 0.000 Intergenic Intergenic 19933 NR_028594 401898 Hs.672384 NM_001013691 ZNF833P ZNF833 zinc finger protein 833, pseudogene pseudo chr1-2572 chr1 32068917 32069127 + 14.6 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -3009 NM_001319677 55116 Hs.25544 NM_018056 ENSG00000121775 TMEM39B - transmembrane protein 39B protein-coding chr19-2669 chr19 11448991 11449201 + 14.6 0.000 exon (NM_002743, exon 16 of 18) exon (NM_002743, exon 16 of 18) -13314 NM_001302453 115948 Hs.124010 NM_145045 ENSG00000198003 CCDC151 CILD30 coiled-coil domain containing 151 protein-coding chr11-2128 chr11 2413666 2413876 + 14.6 0.000 intron (NM_014555, intron 12 of 23) intron (NM_014555, intron 12 of 23) 9274 NM_014555 29850 Hs.272287 NM_014555 ENSG00000070985 TRPM5 LTRPC5|MTR1 transient receptor potential cation channel subfamily M member 5 protein-coding chr6-2279 chr6 75997822 75998032 + 14.6 0.000 intron (NM_001563, intron 12 of 16) L2c|LINE|L2 74735 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr4-1693 chr4 156790905 156791115 + 14.6 0.000 intron (NM_016205, intron 3 of 5) intron (NM_016205, intron 3 of 5) 180789 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr10-1874 chr10 98486499 98486709 + 14.6 0.000 intron (NM_021828, intron 10 of 11) intron (NM_021828, intron 10 of 11) -39641 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr7-1736 chr7 26143722 26143932 + 14.6 0.000 Intergenic Intergenic -8371 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr2-5904 chr2 5225791 5226001 + 14.6 0.000 Intergenic MER20|DNA|hAT-Charlie 465222 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr1-6109 chr1 151534890 151535100 + 14.6 0.000 intron (NM_020770, intron 15 of 20) intron (NM_020770, intron 15 of 20) -5314 NM_001301317 7286 Hs.489922 NM_020127 ENSG00000143367 TUFT1 - tuftelin 1 protein-coding chr3-1723 chr3 100533166 100533376 + 14.6 0.000 intron (NM_001363876, intron 2 of 6) MER5B|DNA|hAT-Charlie 40652 NM_018004 55076 Hs.658956 NM_018004 ENSG00000181458 TMEM45A DERP7|DNAPTP4 transmembrane protein 45A protein-coding chr3-2951 chr3 60876937 60877147 + 14.6 0.000 intron (NM_001320900, intron 4 of 9) L1MA4|LINE|L1 -259172 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr8-1832 chr8 133981625 133981835 + 14.6 0.000 Intergenic Intergenic 95234 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr2-2206 chr2 69307317 69307527 + 14.6 0.000 Intergenic CpG 79805 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr10-1565 chr10 132626395 132626605 + 14.6 0.000 intron (NM_005539, intron 2 of 15) intron (NM_005539, intron 2 of 15) -54775 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr1-1700 chr1 245156428 245156638 + 14.6 0.000 exon (NM_018012, exon 2 of 15) exon (NM_018012, exon 2 of 15) 1548 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr8-784 chr8 66522518 66522728 + 14.6 0.000 Intergenic Intergenic 29057 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 VXN C8orf46 vexin protein-coding chr19-3453 chr19 30156300 30156510 + 14.6 0.000 Intergenic MER20|DNA|hAT-Charlie 214166 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr18-208 chr18 12308169 12308379 + 14.6 0.000 promoter-TSS (NM_001303526) promoter-TSS (NM_001303526) 33 NM_032525 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr10-799 chr10 5585001 5585211 + 14.6 0.000 Intergenic Intergenic 11012 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr8-1325 chr8 22987131 22987341 + 14.6 0.000 promoter-TSS (NM_001160036) promoter-TSS (NM_001160036) -15 NM_001160036 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr19-2741 chr19 38550034 38550244 + 14.6 0.000 intron (NM_001042723, intron 88 of 104) L1MC4|LINE|L1 -46208 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr5-1522 chr5 156186721 156186931 + 14.6 0.000 Intergenic Intergenic -139931 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr5-1036 chr5 156367639 156367849 + 14.6 0.000 intron (NM_001128209, intron 2 of 7) intron (NM_001128209, intron 2 of 7) 40580 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr17-3320 chr17 65594275 65594485 + 14.6 0.000 Intergenic Intergenic -32732 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr10-2736 chr10 113648626 113648836 + 14.6 0.000 intron (NM_001322945, intron 9 of 40) intron (NM_001322945, intron 9 of 40) 15310 NM_198060 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr1-4114 chr1 243926911 243927121 + 14.6 0.000 intron (NR_033883, intron 1 of 11) intron (NR_033883, intron 1 of 11) 9614 NR_033883 339529 Hs.209374 NR_033883 ENSG00000226828 LINC02774 - long intergenic non-protein coding RNA 2774 ncRNA chr17-1107 chr17 81365801 81366011 + 14.6 0.000 Intergenic Intergenic 19219 NM_001347841 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr8-1490 chr8 42125979 42126189 + 14.6 0.000 Intergenic HAL1b|LINE|L1 -26862 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr11-3376 chr11 126136510 126136720 + 14.6 0.000 Intergenic MARNA|DNA|TcMar-Mariner -73323 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr21-253 chr21 45543354 45543564 + 14.6 0.000 intron (NM_001352511, intron 1 of 5) intron (NM_001352511, intron 1 of 5) -1019 NM_001352510 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr13-1516 chr13 21336909 21337119 + 14.6 0.000 intron (NR_103841, intron 1 of 2) intron (NR_103841, intron 1 of 2) 7772 NR_103840 100652865 Hs.659198 NR_103840 LINC00539 LINC00422 long intergenic non-protein coding RNA 539 ncRNA chr1-5242 chr1 201713233 201713443 + 14.6 0.000 intron (NM_020443, intron 2 of 29) intron (NM_020443, intron 2 of 29) -6170 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chr1-5223 chr1 193013032 193013242 + 14.6 0.000 non-coding (NR_146930, exon 13 of 13) non-coding (NR_146930, exon 13 of 13) 44278 NR_135615 107397392 NR_135615 ENSG00000238754 SCARNA18B - small Cajal body-specific RNA 18B ncRNA chr2-2628 chr2 75602854 75603064 + 14.6 0.000 Intergenic Intergenic -33240 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr11-455 chr11 75525840 75526050 + 14.6 0.000 promoter-TSS (NM_001351168) promoter-TSS (NM_001351168) -4 NM_030792 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr12-894 chr12 106357686 106357896 + 14.6 0.000 promoter-TSS (NM_018082) promoter-TSS (NM_018082) 43 NM_018082 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding chr6-463 chr6 18387300 18387510 + 14.6 0.000 promoter-TSS (NM_182757) promoter-TSS (NM_182757) 55 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr10-1186 chr10 88848540 88848750 + 14.6 0.000 intron (NM_144590, intron 1 of 5) MIR3|SINE|MIR 3199 NM_144590 118932 Hs.217484 NM_144590 ENSG00000152766 ANKRD22 - ankyrin repeat domain 22 protein-coding chr6-1204 chr6 35500797 35501007 + 14.6 0.000 intron (NM_001289395, intron 12 of 13) intron (NM_001289395, intron 12 of 13) -3823 NM_003214 7005 Hs.485205 NM_003214 ENSG00000007866 TEAD3 DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5 TEA domain transcription factor 3 protein-coding chr6-800 chr6 26043643 26043853 + 14.6 0.000 promoter-TSS (NM_021062) promoter-TSS (NM_021062) -91 NM_021062 3018 Hs.553494 NM_021062 ENSG00000276410 HIST1H2BB H2B.1|H2B/f|H2BFF histone cluster 1 H2B family member b protein-coding chr17-2187 chr17 68599295 68599505 + 14.6 0.000 intron (NM_001243746, intron 1 of 11) intron (NM_001243746, intron 1 of 11) 1967 NM_017565 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding chr2-4505 chr2 23073609 23073819 + 14.6 0.000 Intergenic MIR|SINE|MIR -311465 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr8-1698 chr8 98166711 98166921 + 14.6 0.000 Intergenic Intergenic 48976 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr7-2336 chr7 297728 297938 + 14.6 0.000 Intergenic Intergenic -81592 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr7-1531 chr7 100218151 100218361 + 14.6 0.000 promoter-TSS (NM_024070) promoter-TSS (NM_024070) -992 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr1-4037 chr1 201137630 201137840 + 14.6 0.000 intron (NM_016456, intron 5 of 5) MIR|SINE|MIR 16739 NM_001288565 252839 Hs.181444 NM_016456 ENSG00000116857 TMEM9 DERM4|TMEM9A transmembrane protein 9 protein-coding chr16-1509 chr16 25172803 25173013 + 14.6 0.000 intron (NM_001032391, intron 7 of 8) intron (NM_001032391, intron 7 of 8) -23876 NR_039998 100506655 Hs.657576 NR_039998 ENSG00000260034 LCMT1-AS2 - LCMT1 antisense RNA 2 ncRNA chr3-2814 chr3 11757805 11758015 + 14.6 0.000 Intergenic L2c|LINE|L2 -37371 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr2-2436 chr2 46452154 46452364 + 14.6 0.000 Intergenic L2b|LINE|L2 23069 NR_103805 101805491 Hs.304781 NR_103805 ENSG00000187600 LINC02583 - long intergenic non-protein coding RNA 2583 ncRNA chr18-586 chr18 14972000 14972210 + 14.6 0.000 intron (NR_104164, intron 3 of 3) intron (NR_104164, intron 3 of 3) -1637 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr9-1546 chr9 135615325 135615535 + 14.6 0.000 Intergenic Intergenic 24110 NM_182974 360203 Hs.522491 NM_182974 ENSG00000204007 GLT6D1 GLTDC1|GT6M7 glycosyltransferase 6 domain containing 1 protein-coding chr1-3885 chr1 53781511 53781721 + 14.6 0.000 intron (NR_033142, intron 15 of 16) intron (NR_033142, intron 15 of 16) -42452 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr7-1867 chr7 18408538 18408748 + 14.6 0.000 intron (NM_001321896, intron 1 of 12) intron (NM_001321896, intron 1 of 12) -87067 NM_001204146 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr20-683 chr20 58237934 58238144 + 14.6 0.000 intron (NR_003505, intron 14 of 16) intron (NR_003505, intron 14 of 16) -9386 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr18-793 chr18 49656173 49656383 + 14.6 0.000 Intergenic Intergenic 94221 NM_001308006 9388 Hs.465102 NM_006033 ENSG00000101670 LIPG EDL|EL|PRO719 lipase G, endothelial type protein-coding chrX-528 chrX 53225480 53225690 + 14.6 0.000 promoter-TSS (NR_148672) promoter-TSS (NR_148672) -163 NM_001353984 8242 Hs.631768 NM_004187 ENSG00000126012 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine demethylase 5C protein-coding chr3-1452 chr3 46114454 46114664 + 14.6 0.000 Intergenic HERVP71A-int|LTR|ERV1 -87076 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr4-1550 chr4 186808700 186808910 + 14.6 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -84949 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr4-1058 chr4 87849108 87849318 + 14.6 0.000 Intergenic Intergenic 14510 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr7-2457 chr7 157036206 157036416 + 14.6 0.000 Intergenic L1M4|LINE|L1 25454 NR_038835 645249 Hs.224879 NR_038835 ENSG00000243479 MNX1-AS1 CCAT5 MNX1 antisense RNA 1 (head to head) ncRNA chr17-1762 chr17 20575221 20575431 + 14.6 0.000 Intergenic L1ME4a|LINE|L1 -4398 NM_001190790 256223 Hs.131916 NM_001190790 ENSG00000214819 CDRT15L2 - CMT1A duplicated region transcript 15 like 2 protein-coding chr3-4854 chr3 157066890 157067100 + 14.6 0.000 Intergenic Intergenic -14846 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA chr16-2030 chr16 27326899 27327109 + 14.6 0.000 intron (NM_001257997, intron 1 of 9) intron (NM_001257997, intron 1 of 9) 13030 NM_001257997 3566 Hs.513457 NM_000418 ENSG00000077238 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding chr7-2736 chr7 43083176 43083386 + 14.6 0.000 Intergenic Intergenic -29366 NM_015052 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr3-2578 chr3 119524999 119525209 + 14.6 0.000 TTS (NM_016589) TTS (NM_016589) 26557 NM_016589 51300 Hs.477287 NM_016589 ENSG00000113845 TIMMDC1 C3orf1|MC1DN31 translocase of inner mitochondrial membrane domain containing 1 protein-coding chr12-1146 chr12 123390469 123390679 + 14.6 0.000 promoter-TSS (NM_001324506) promoter-TSS (NM_001324506) -701 NM_001324506 387893 Hs.443735 NM_020382 ENSG00000183955 KMT5A PR-Set7|PR/SET07|SET07|SET8|SETD8 lysine methyltransferase 5A protein-coding chr20-473 chr20 63909701 63909911 + 14.6 0.000 intron (NM_025219, intron 1 of 4) intron (NM_025219, intron 1 of 4) -9643 NR_030637 100126329 NR_030637 ENSG00000283206 MIR941-1 MIRN941-1|mir-941-1 microRNA 941-1 ncRNA chr10-1131 chr10 4131677 4131887 + 14.6 0.000 Intergenic Intergenic 80056 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA chr15-849 chr15 67107039 67107249 + 14.6 0.000 intron (NM_005902, intron 1 of 8) L2a|LINE|L2 -18572 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr3-1012 chr3 99789392 99789602 + 14.6 0.000 intron (NM_001850, intron 3 of 4) intron (NM_001850, intron 3 of 4) -28365 NM_032359 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr7-2861 chr7 112435148 112435358 + 14.6 0.000 intron (NM_001197080, intron 1 of 11) intron (NM_001197080, intron 1 of 11) 12109 NM_001007245 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr5-1519 chr5 150034709 150034919 + 14.6 0.000 intron (NM_014983, intron 11 of 19) L3|LINE|CR1 34075 NM_001366501 22993 Hs.719189 NM_014983 ENSG00000113716 HMGXB3 HMGX3|SMF HMG-box containing 3 protein-coding chr4-669 chr4 87219721 87219931 + 14.6 0.000 intron (NM_001292006, intron 1 of 9) CpG 442 NM_001292003 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr12-889 chr12 101830890 101831100 + 14.6 0.000 promoter-TSS (NM_024312) promoter-TSS (NM_024312) -36 NM_024312 79158 Hs.46850 NM_024312 ENSG00000111670 GNPTAB GNPTA|ICD N-acetylglucosamine-1-phosphate transferase subunits alpha and beta protein-coding chr1-5112 chr1 150273470 150273680 + 14.6 0.000 intron (NM_001301041, intron 1 of 4) MIR3|SINE|MIR 776 NM_001301042 79630 Hs.91283 NM_024579 ENSG00000118292 C1orf54 - chromosome 1 open reading frame 54 protein-coding chr1-3033 chr1 1659028 1659238 + 14.6 0.000 promoter-TSS (NM_001291345) promoter-TSS (NM_001291345) -129 NM_033489 984 Hs.651228 NM_001787 ENSG00000248333 CDK11B CDC2L1|CDK11|CDK11-p110|CDK11-p46|CDK11-p58|CLK-1|PITSLREA|PK58|p58|p58CDC2L1|p58CLK-1 cyclin dependent kinase 11B protein-coding chr2-3065 chr2 100056267 100056477 + 14.6 0.000 intron (NM_001025108, intron 2 of 23) Plat_L3|LINE|CR1 49211 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr12-336 chr12 120495977 120496187 + 14.6 0.000 promoter-TSS (NR_038854) promoter-TSS (NR_038854) -31 NM_003746 8655 Hs.5120 NM_003746 ENSG00000088986 DYNLL1 DLC1|DLC8|DNCL1|DNCLC1|LC8|LC8a|PIN|hdlc1 dynein light chain LC8-type 1 protein-coding chr18-405 chr18 28115092 28115302 + 14.6 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) 61933 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr3-1787 chr3 24591840 24592050 + 14.6 0.000 Intergenic Intergenic -96237 NM_001354708 7068 Hs.187861 NM_000461 ENSG00000151090 THRB C-ERBA-2|C-ERBA-BETA|ERBA2|GRTH|NR1A2|PRTH|THR1|THRB1|THRB2 thyroid hormone receptor beta protein-coding chr11-3610 chr11 68465866 68466076 + 14.6 0.000 intron (NM_001352362, intron 2 of 24) intron (NM_001352362, intron 2 of 24) 5219 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr6-1879 chr6 111628429 111628639 + 14.6 0.000 Intergenic Intergenic -22260 NM_001164281 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr1-6538 chr1 28129221 28129431 + 14.6 0.000 Intergenic Intergenic -40689 NM_001282562 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr2-4243 chr2 219707529 219707739 + 14.6 0.000 Intergenic Intergenic 80004 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr18-1063 chr18 25437790 25438000 + 14.6 0.000 Intergenic Intergenic -85729 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr7-952 chr7 129066971 129067181 + 14.6 0.000 Intergenic Intergenic 11853 NR_002187 286016 Hs.369665 NR_002187 ENSG00000230359 TPI1P2 - triosephosphate isomerase 1 pseudogene 2 pseudo chr7-2135 chr7 38215943 38216153 + 14.6 0.000 intron (NM_001363347, intron 5 of 8) intron (NM_001363347, intron 5 of 8) 37803 NM_001363344 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr2-2852 chr2 151374434 151374644 + 14.6 0.000 intron (NM_007115, intron 5 of 5) intron (NM_007115, intron 5 of 5) 4832 NR_110248 101929319 Hs.639241 NR_110248 LOC101929319 - uncharacterized LOC101929319 ncRNA chr2-3116 chr2 158937146 158937356 + 14.6 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -31383 NM_001350064 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr10-2734 chr10 113450644 113450854 + 14.6 0.000 Intergenic MER103C|DNA|hAT-Charlie -100082 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr13-557 chr13 21670357 21670567 + 14.6 0.000 promoter-TSS (NM_002010) promoter-TSS (NM_002010) -611 NM_002010 2254 Hs.111 NM_002010 ENSG00000102678 FGF9 FGF-9|GAF|HBFG-9|HBGF-9|SYNS3 fibroblast growth factor 9 protein-coding chr4-2616 chr4 141469519 141469729 + 14.6 0.000 Intergenic Intergenic -137007 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chrX-853 chrX 133023212 133023422 + 14.6 0.000 Intergenic Intergenic 4955 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding KI270722.1-1 KI270722.1 183747 183957 + 14.6 0.000 NA NA NA NA chr16-1126 chr16 53022530 53022740 + 14.6 0.000 Intergenic Intergenic 30238 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr10-2117 chr10 132206373 132206583 + 14.6 0.000 TTS (NM_006426) TTS (NM_006426) 19530 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr12-1507 chr12 51980343 51980553 + 14.6 0.000 intron (NM_004302, intron 3 of 8) intron (NM_004302, intron 3 of 8) -26498 NM_181711 160622 Hs.407202 NM_181711 ENSG00000161835 GRASP TAMALIN general receptor for phosphoinositides 1 associated scaffold protein protein-coding chr5-989 chr5 35230384 35230594 + 14.6 0.000 promoter-TSS (NM_000949) promoter-TSS (NM_000949) -2 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr11-1826 chr11 64329394 64329604 + 14.6 0.000 Intergenic Intergenic -10705 NM_032251 283234 Hs.98564 NM_032251 ENSG00000168071 CCDC88B BRLZ|CCDC88|HKRP3|gipie coiled-coil domain containing 88B protein-coding chr3-1252 chr3 161221069 161221279 + 14.6 0.000 promoter-TSS (NM_001320227) promoter-TSS (NM_001320227) -116 NM_015938 51068 Hs.598836 NM_015938 ENSG00000169251 NMD3 CGI-07 NMD3 ribosome export adaptor protein-coding chr5-1710 chr5 132225594 132225804 + 14.6 0.000 intron (NM_001365681, intron 1 of 13) intron (NM_001365681, intron 1 of 13) 1543 NM_004199 8974 Hs.519568 NM_004199 ENSG00000072682 P4HA2 MYP25 prolyl 4-hydroxylase subunit alpha 2 protein-coding chr8-1450 chr8 142676171 142676381 + 14.6 0.000 intron (NR_033343, intron 1 of 2) intron (NR_033343, intron 1 of 2) -4219 NM_005672 8000 Hs.652235 NM_005672 ENSG00000167653 PSCA PRO232 prostate stem cell antigen protein-coding chr3-1144 chr3 46909699 46909909 + 14.6 0.000 Intergenic Intergenic 27555 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr15-732 chr15 75123570 75123780 + 14.6 0.000 Intergenic L1MEd|LINE|L1 -78207 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr19-2159 chr19 9597087 9597297 + 14.6 0.000 Intergenic LTR10F|LTR|ERV1 -12688 NM_001308269 7675 Hs.501537 NM_001008727 ENSG00000197961 ZNF121 D19S204|ZHC32|ZNF20 zinc finger protein 121 protein-coding chr17-4124 chr17 81607526 81607736 + 14.6 0.000 intron (NM_001369698, intron 6 of 16) intron (NM_001369698, intron 6 of 16) 29481 NM_017921 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr2-2368 chr2 234335894 234336104 + 14.6 0.000 Intergenic Intergenic 118596 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr17-3835 chr17 42920877 42921087 + 14.6 0.000 Intergenic OldhAT1|DNA|hAT-Ac 20183 NM_001270397 2538 Hs.212293 NM_000151 ENSG00000131482 G6PC G6PC1|G6PT|G6Pase|GSD1|GSD1a glucose-6-phosphatase catalytic subunit protein-coding chr1-1654 chr1 244863116 244863326 + 14.6 0.000 intron (NM_004501, intron 1 of 13) CpG 1304 NM_004501 3192 Hs.106212 NM_004501 ENSG00000153187 HNRNPU EIEE54|GRIP120|HNRNPU-AS1|HNRPU|SAF-A|SAFA|U21.1|hnRNP U|pp120 heterogeneous nuclear ribonucleoprotein U protein-coding chr16-1489 chr16 3083656 3083866 + 14.6 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 15533 NM_001365272 84891 Hs.334515 NM_032805 ENSG00000130182 ZSCAN10 ZFP206|ZNF206 zinc finger and SCAN domain containing 10 protein-coding chr11-3829 chr11 68220083 68220293 + 14.6 0.000 Intergenic AluJb|SINE|Alu -6540 NR_161380 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr2-2824 chr2 85318438 85318648 + 14.6 0.000 3' UTR (NM_006464, exon 4 of 4) 3' UTR (NM_006464, exon 4 of 4) 9446 NM_001206840 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr4-1673 chr4 142934511 142934721 + 14.6 0.000 Intergenic Intergenic -88081 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr16-916 chr16 86575692 86575902 + 14.6 0.000 Intergenic CpG -2712 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr3-1838 chr3 70849888 70850098 + 14.6 0.000 Intergenic Intergenic 214931 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr2-2159 chr2 216682451 216682661 + 14.6 0.000 intron (NM_000599, intron 1 of 3) L3b|LINE|CR1 12993 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr1-6874 chr1 115067505 115067715 + 14.6 0.000 intron (NM_005725, intron 2 of 7) intron (NM_005725, intron 2 of 7) 21890 NM_001308315 10100 Hs.310458 NM_005725 ENSG00000134198 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding chr14-985 chr14 77303668 77303878 + 14.6 0.000 intron (NM_013382, intron 4 of 20) L2a|LINE|L2 17109 NM_013382 29954 Hs.132989 NM_013382 ENSG00000009830 POMT2 LGMD2N|LGMDR14|MDDGA2|MDDGB2|MDDGC2 protein O-mannosyltransferase 2 protein-coding chr22-1062 chr22 19087031 19087241 + 14.6 0.000 intron (NR_033674, intron 1 of 8) intron (NR_033674, intron 1 of 8) 35276 NM_005137 9993 Hs.517357 NM_005137 ENSG00000070413 DGCR2 DGS-C|IDD|LAN|SEZ-12 DiGeorge syndrome critical region gene 2 protein-coding chr5-254 chr5 138534858 138535068 + 14.6 0.000 intron (NM_001291975, intron 2 of 11) AluSx|SINE|Alu 6748 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr10-1584 chr10 19638551 19638761 + 14.6 0.000 intron (NM_001142308, intron 36 of 39) intron (NM_001142308, intron 36 of 39) 89894 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr17-1562 chr17 17850076 17850286 + 14.6 0.000 intron (NM_001350333, intron 12 of 13) intron (NM_001350333, intron 12 of 13) -13170 NM_004176 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr16-1138 chr16 84511343 84511553 + 14.6 0.000 Intergenic Intergenic -6789 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr13-894 chr13 41411428 41411638 + 14.6 0.000 Intergenic Intergenic -31031 NR_002163 100506759 Hs.507861 NR_002163 OR7E37P OR7E48P|OST193|hg533 olfactory receptor family 7 subfamily E member 37 pseudogene pseudo chr2-1214 chr2 231198346 231198556 + 14.6 0.000 promoter-TSS (NM_001352756) promoter-TSS (NM_001352756) -180 NM_001271466 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr8-1707 chr8 119219840 119220050 + 14.6 0.000 intron (NR_149111, intron 1 of 1) intron (NR_149111, intron 1 of 1) 11582 NM_052886 114569 Hs.201083 NM_052886 ENSG00000147676 MAL2 - mal, T cell differentiation protein 2 (gene/pseudogene) protein-coding chrX-617 chrX 15307378 15307588 + 14.6 0.000 intron (NM_001201583, intron 1 of 6) MER1B|DNA|hAT-Charlie 7076 NM_001012428 140456 Hs.352183 NM_080873 ENSG00000165192 ASB11 - ankyrin repeat and SOCS box containing 11 protein-coding chr19-1187 chr19 43078565 43078775 + 14.6 0.000 intron (NM_031246, intron 2 of 5) LTR8B|LTR|ERV1 4031 NM_031246 5670 Hs.709200 NM_031246 ENSG00000242221 PSG2 CEA|PSBG2|PSG1 pregnancy specific beta-1-glycoprotein 2 protein-coding chr11-3189 chr11 64628703 64628913 + 14.6 0.000 intron (NM_015080, intron 19 of 22) intron (NM_015080, intron 19 of 22) 14737 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr5-2433 chr5 124736128 124736338 + 14.6 0.000 intron (NM_020747, intron 1 of 8) intron (NM_020747, intron 1 of 8) 8879 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr16-1579 chr16 88716483 88716693 + 14.6 0.000 promoter-TSS (NR_039873) promoter-TSS (NR_039873) -251 NR_039873 100616167 NR_039873 ENSG00000284585 MIR4722 - microRNA 4722 ncRNA chrX-307 chrX 40085268 40085478 + 14.6 0.000 intron (NM_001123384, intron 1 of 13) intron (NM_001123384, intron 1 of 13) 12093 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr21-315 chr21 28069622 28069832 + 14.6 0.000 intron (NR_126010, intron 1 of 4) intron (NR_126010, intron 1 of 4) -20676 NR_126011 284825 Hs.651529 NR_126010 ENSG00000232079 LINC01697 - long intergenic non-protein coding RNA 1697 ncRNA chr13-549 chr13 112761049 112761259 + 14.6 0.000 intron (NM_032189, intron 1 of 28) Tigger7|DNA|TcMar-Tigger -6423 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr21-143 chr21 42094096 42094306 + 14.6 0.000 intron (NM_001004416, intron 6 of 22) intron (NM_001004416, intron 6 of 22) 14333 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr9-402 chr9 133121162 133121372 + 14.6 0.000 promoter-TSS (NM_006266) promoter-TSS (NM_006266) -27 NM_006266 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr19-1535 chr19 18764105 18764315 + 14.6 0.000 intron (NM_015321, intron 8 of 13) intron (NM_015321, intron 8 of 13) 27095 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr9-1562 chr9 13608153 13608363 + 14.6 0.000 Intergenic Intergenic -176929 NR_033863 401492 Hs.632651 NR_033863 ENSG00000270547 LINC01235 - long intergenic non-protein coding RNA 1235 ncRNA chr12-699 chr12 43758937 43759147 + 14.6 0.000 promoter-TSS (NM_001351342) promoter-TSS (NM_001351342) 98 NM_001114182 51135 Hs.138499 NM_016123 ENSG00000198001 IRAK4 IPD1|IRAK-4|NY-REN-64|REN64 interleukin 1 receptor associated kinase 4 protein-coding chr17-1268 chr17 50347342 50347552 + 14.6 0.000 intron (NR_110010, intron 1 of 9) intron (NR_110010, intron 1 of 9) 1321 NR_110010 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr3-1386 chr3 69838366 69838576 + 14.6 0.000 intron (NM_001354607, intron 2 of 10) intron (NM_001354607, intron 2 of 10) -27753 NM_198177 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr3-2406 chr3 190048948 190049158 + 14.6 0.000 intron (NM_001134418, intron 1 of 14) intron (NM_001134418, intron 1 of 14) 71844 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr13-1870 chr13 25335973 25336183 + 14.6 0.000 intron (NM_014089, intron 13 of 15) intron (NM_014089, intron 13 of 15) 34453 NM_014089 9818 Hs.507537 NM_014089 ENSG00000139496 NUP58 NUP45|NUPL1|PRO2463 nucleoporin 58 protein-coding chr19-2418 chr19 36687880 36688090 + 14.6 0.000 promoter-TSS (NR_110707) promoter-TSS (NR_110707) 373 NM_001322919 163081 Hs.412517 NM_152603 ENSG00000189042 ZNF567 - zinc finger protein 567 protein-coding chr13-1125 chr13 25201700 25201910 + 14.6 0.000 Intergenic Intergenic 20473 NR_120427 102723318 Hs.549877 NR_120427 LINC01053 - long intergenic non-protein coding RNA 1053 ncRNA chr18-925 chr18 69898662 69898872 + 14.6 0.000 intron (NM_001303619, intron 1 of 4) intron (NM_001303619, intron 1 of 4) 49106 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr2-3912 chr2 47669590 47669800 + 14.6 0.000 Intergenic LTR48B|LTR|ERV1 -99364 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr12-1589 chr12 6182382 6182592 + 14.6 0.000 Intergenic Intergenic -17459 NM_001330312 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr13-1229 chr13 83325578 83325788 + 14.6 0.000 Intergenic L1MC3|LINE|L1 556710 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr7-855 chr7 44490592 44490802 + 14.6 0.000 promoter-TSS (NM_015332) promoter-TSS (NM_015332) -39 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr4-1490 chr4 39353933 39354143 + 14.6 0.000 intron (NM_001204747, intron 1 of 24) intron (NM_001204747, intron 1 of 24) 12324 NM_001204747 5981 Hs.507475 NM_002913 ENSG00000035928 RFC1 A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C subunit 1 protein-coding chr18-931 chr18 75475341 75475551 + 14.6 0.000 Intergenic Intergenic -47743 NM_001037331 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr14-976 chr14 72638016 72638226 + 14.6 0.000 intron (NM_001280542, intron 8 of 10) intron (NM_001280542, intron 8 of 10) 121301 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr5-1406 chr5 150152538 150152748 + 14.6 0.000 non-coding (NR_149150, exon 2 of 2) non-coding (NR_149150, exon 2 of 2) 3202 NM_001355016 5159 Hs.509067 NM_002609 ENSG00000113721 PDGFRB CD140B|IBGC4|IMF1|JTK12|KOGS|PDGFR|PDGFR-1|PDGFR1|PENTT platelet derived growth factor receptor beta protein-coding chr9-2874 chr9 130156683 130156893 + 14.6 0.000 Intergenic Intergenic -12569 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr12-2028 chr12 51952281 51952491 + 14.6 0.000 promoter-TSS (NM_020327) promoter-TSS (NM_020327) 687 NM_020328 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr9-2109 chr9 92181152 92181362 + 14.6 0.000 Intergenic Intergenic 9899 NM_001350291 138652 Hs.742918 NM_001350291 PRSS47 - serine protease 47 protein-coding chr6-1385 chr6 102736813 102737023 + 14.6 0.000 Intergenic MLT2B3|LTR|ERVL 1337933 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr9-549 chr9 72365131 72365341 + 14.6 0.000 promoter-TSS (NM_001278244) promoter-TSS (NM_001278244) -28 NM_001102420 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr9-1481 chr9 121498149 121498359 + 14.6 0.000 intron (NR_003191, intron 1 of 6) intron (NR_003191, intron 1 of 6) 1773 NR_045211 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr2-4177 chr2 187993612 187993822 + 14.6 0.000 Intergenic L1PBa|LINE|L1 293974 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr18-636 chr18 28175311 28175521 + 14.6 0.000 intron (NM_001792, intron 1 of 15) intron (NM_001792, intron 1 of 15) 1714 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18-490 chr18 8859140 8859350 + 14.6 0.000 Intergenic Intergenic 141864 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr14-935 chr14 23365061 23365271 + 14.6 0.000 promoter-TSS (NM_005864) promoter-TSS (NM_005864) 6 NM_005864 10278 Hs.24587 NM_005864 ENSG00000100842 EFS CAS3|CASS3|EFS1|EFS2|HEFS|SIN embryonal Fyn-associated substrate protein-coding chr16-2119 chr16 2303727 2303937 + 14.6 0.000 intron (NM_001089, intron 12 of 32) intron (NM_001089, intron 12 of 32) 29212 NR_039868 100616241 NR_039868 ENSG00000264004 MIR4717 - microRNA 4717 ncRNA chr1-2800 chr1 3391484 3391694 + 14.6 0.000 intron (NM_022114, intron 4 of 16) intron (NM_022114, intron 4 of 16) -63076 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr14-1147 chr14 29418614 29418824 + 14.6 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger 508377 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr9-1333 chr9 96486532 96486742 + 14.6 0.000 intron (NM_014282, intron 6 of 7) intron (NM_014282, intron 6 of 7) 36468 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr16-1096 chr16 81711626 81711836 + 14.6 0.000 TTS (NM_198390) TTS (NM_198390) 46377 NR_045112 100129617 Hs.657151 NR_045112 LOC100129617 - uncharacterized LOC100129617 ncRNA chr7-3163 chr7 90271647 90271857 + 14.6 0.000 intron (NM_001039706, intron 7 of 22) intron (NM_001039706, intron 7 of 22) 26578 NM_001039706 79846 Hs.521014 NM_024788 ENSG00000105792 CFAP69 C7orf63|FAP69|SPGF24 cilia and flagella associated protein 69 protein-coding chr2-3193 chr2 216577582 216577792 + 14.6 0.000 Intergenic AluJr|SINE|Alu 29251 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr3-2057 chr3 155070977 155071187 + 14.6 0.000 intron (NM_001354642, intron 1 of 22) intron (NM_001354642, intron 1 of 22) -8590 NM_000902 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr10-2946 chr10 31413348 31413558 + 14.6 0.000 intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) -13698 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr9-3629 chr9 91419434 91419644 + 14.6 0.000 intron (NM_001290000, intron 1 of 1) intron (NM_001290000, intron 1 of 1) 4293 NM_005384 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr10-1863 chr10 86757287 86757497 + 14.6 0.000 intron (NM_004329, intron 1 of 12) CpG 753 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr8-1868 chr8 18957579 18957789 + 14.6 0.000 intron (NM_015310, intron 1 of 15) intron (NM_015310, intron 1 of 15) 56019 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr19-1257 chr19 1617322 1617532 + 14.6 0.000 intron (NM_001136139, intron 16 of 19) intron (NM_001136139, intron 16 of 19) -11965 NM_006830 10975 Hs.8372 NM_006830 ENSG00000127540 UQCR11 0710008D09Rik|QCR10|UQCR ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding chrX-828 chrX 104351472 104351682 + 14.6 0.000 Intergenic Intergenic -96644 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr11-1059 chr11 65150904 65151114 + 14.6 0.000 Intergenic Intergenic -16490 NM_032431 84447 Hs.75859 NM_032431 ENSG00000162298 SYVN1 DER3|HRD1 synoviolin 1 protein-coding chr1-5001 chr1 64019948 64020158 + 14.6 0.000 intron (NM_005012, intron 2 of 8) MLT1C|LTR|ERVL-MaLR 92152 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr1-1184 chr1 31065705 31065915 + 14.6 0.000 promoter-TSS (NM_014676) promoter-TSS (NM_014676) -93 NM_001020658 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr5-2411 chr5 110904047 110904257 + 14.6 0.000 Intergenic Intergenic 165145 NM_138773 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding chr7-2692 chr7 22586878 22587088 + 14.6 0.000 Intergenic Intergenic 23646 NR_038393 100506178 Hs.668122 NR_038393 ENSG00000232759 LOC100506178 - uncharacterized LOC100506178 ncRNA chr2-3689 chr2 204073256 204073466 + 14.6 0.000 Intergenic Intergenic 136613 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr3-1986 chr3 152302616 152302826 + 14.6 0.000 intron (NM_207296, intron 1 of 7) intron (NM_207296, intron 1 of 7) 3316 NM_207297 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding chr11-1942 chr11 105609938 105610148 + 14.6 0.000 promoter-TSS (NM_001112812) promoter-TSS (NM_001112812) -30 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr1-5300 chr1 216562140 216562350 + 14.6 0.000 intron (NM_001243518, intron 6 of 7) intron (NM_001243518, intron 6 of 7) -138797 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr3-1807 chr3 47383168 47383378 + 14.6 0.000 intron (NM_015466, intron 1 of 24) intron (NM_015466, intron 1 of 24) 2252 NM_001304482 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr9-1167 chr9 37482330 37482540 + 14.6 0.000 Intergenic Intergenic -3500 NM_001282766 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr7-1801 chr7 99899105 99899315 + 14.6 0.000 intron (NM_033091, intron 5 of 5) LTR32|LTR|ERVL 20320 NM_033091 89122 Hs.50749 NM_033017 ENSG00000146833 TRIM4 RNF87 tripartite motif containing 4 protein-coding chr2-1554 chr2 234969456 234969666 + 14.6 0.000 intron (NM_001371302, intron 1 of 5) intron (NM_001371302, intron 1 of 5) 4222 NM_001371302 chr15-1017 chr15 80743268 80743478 + 14.6 0.000 intron (NM_021214, intron 1 of 2) intron (NM_021214, intron 1 of 2) -35997 NM_001293298 57214 Hs.459088 NM_018689 ENSG00000103888 CEMIP CCSP1|HYBID|KIAA1199|TMEM2L cell migration inducing hyaluronidase 1 protein-coding chr2-4419 chr2 127670650 127670860 + 14.6 0.000 intron (NM_001161404, intron 1 of 9) intron (NM_001161404, intron 1 of 9) 4775 NM_001161403 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr11-1754 chr11 130738684 130738894 + 14.6 0.000 Intergenic Intergenic 65833 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding chr10-1551 chr10 103970033 103970243 + 14.6 0.000 intron (NM_001304743, intron 1 of 17) MIR|SINE|MIR 2998 NM_014720 9748 Hs.591922 NM_014720 ENSG00000065613 SLK LOSK|STK2|bA16H23.1|se20-9 STE20 like kinase protein-coding chr12-867 chr12 46964630 46964840 + 14.6 0.000 Intergenic Intergenic -114868 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chr5-2998 chr5 3180416 3180626 + 14.6 0.000 intron (NR_104617, intron 1 of 1) intron (NR_104617, intron 1 of 1) 2686 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr21-249 chr21 37855995 37856205 + 14.6 0.000 intron (NM_002240, intron 1 of 3) intron (NM_002240, intron 1 of 3) 60357 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr4-833 chr4 4407118 4407328 + 14.6 0.000 intron (NM_014392, intron 3 of 4) intron (NM_014392, intron 3 of 4) 20260 NM_014392 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr10-1463 chr10 92700151 92700361 + 14.6 0.000 Intergenic Intergenic 10301 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr22-1014 chr22 24175249 24175459 + 14.6 0.000 intron (NM_012295, intron 34 of 36) intron (NM_012295, intron 34 of 36) -6133 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr5-1626 chr5 122260110 122260320 + 14.6 0.000 Intergenic LTR18B|LTR|ERVL -51476 NR_131762 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr1-3116 chr1 42785314 42785524 + 14.6 0.000 promoter-TSS (NR_133055) promoter-TSS (NR_133055) 387 NM_001354602 100129924 Hs.720780 NM_001242750 ENSG00000274386 TMEM269 - transmembrane protein 269 protein-coding chr3-2343 chr3 142120765 142120975 + 14.6 0.000 intron (NM_001178139, intron 1 of 12) intron (NM_001178139, intron 1 of 12) 28674 NM_001178139 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr16-850 chr16 57764861 57765071 + 14.6 0.000 intron (NM_001318712, intron 9 of 17) intron (NM_001318712, intron 9 of 17) 7386 NR_106830 102465463 NR_106830 ENSG00000274816 MIR6772 hsa-mir-6772 microRNA 6772 ncRNA chr17-1266 chr17 49147020 49147230 + 14.6 0.000 intron (NM_153446, intron 3 of 10) LTR80A|LTR|ERVL 14356 NM_153446 124872 Hs.374679 NM_153446 ENSG00000167080 B4GALNT2 B4GALT|GALGT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 protein-coding chr14-674 chr14 69460195 69460405 + 14.6 0.000 3' UTR (NM_001252148, exon 6 of 6) 3' UTR (NM_001252148, exon 6 of 6) -24428 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr2-2803 chr2 36655506 36655716 + 14.6 0.000 Intergenic Intergenic -41079 NM_001177969 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr14-478 chr14 50830237 50830447 + 14.6 0.000 intron (NM_016350, intron 2 of 28) CpG 779 NM_020921 51199 Hs.310429 NM_016350 ENSG00000100503 NIN SCKL7 ninein protein-coding chr9-2479 chr9 71157940 71158150 + 14.6 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) -36424 NM_001366145 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr22-582 chr22 37574740 37574950 + 14.6 0.000 intron (NM_006498, intron 1 of 3) intron (NM_006498, intron 1 of 3) 5242 NM_006498 3957 Hs.531776 NM_006498 ENSG00000100079 LGALS2 HL14 galectin 2 protein-coding chr2-3093 chr2 121860511 121860721 + 14.6 0.000 Intergenic Intergenic 104965 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr1-2476 chr1 91500837 91501047 + 14.6 0.000 promoter-TSS (NM_003503) promoter-TSS (NM_003503) 91 NM_003503 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr9-1029 chr9 129486799 129487009 + 14.6 0.000 Intergenic Intergenic -1756 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr7-4584 chr7 12583387 12583597 + 14.6 0.000 intron (NR_156701, intron 3 of 14) MIRc|SINE|MIR -6031 NM_033128 85477 Hs.633359 NM_033128 ENSG00000006747 SCIN - scinderin protein-coding chr17-3181 chr17 79714610 79714820 + 14.6 0.000 Intergenic Intergenic 7449 NR_109783 100652929 Hs.559249 NR_109783 ENSG00000267719 LINC02078 HP09025 long intergenic non-protein coding RNA 2078 ncRNA chr7-630 chr7 94297474 94297684 + 14.6 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 94613 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr11-2445 chr11 34600854 34601064 + 14.6 0.000 Intergenic Intergenic -20134 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr19-1710 chr19 34068062 34068272 + 14.6 0.000 Intergenic Intergenic -104337 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr16-1141 chr16 85969016 85969226 + 14.6 0.000 Intergenic Intergenic 50774 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr7-3568 chr7 20660454 20660664 + 14.6 0.000 TTS (NM_001163942) TTS (NM_001163942) 13229 NM_178559 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding chr12-2876 chr12 19507796 19508006 + 14.6 0.000 intron (NM_001114176, intron 5 of 8) intron (NM_001114176, intron 5 of 8) 67302 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr6-1118 chr6 135540547 135540757 + 14.6 0.000 intron (NR_152845, intron 2 of 4) intron (NR_152845, intron 2 of 4) 42851 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr10-763 chr10 110211177 110211387 + 14.6 0.000 intron (NM_001008541, intron 1 of 4) intron (NM_001008541, intron 1 of 4) 1051 NM_001008541 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr14-1884 chr14 92251240 92251450 + 14.6 0.000 Intergenic Intergenic -71236 NM_153648 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr6-469 chr6 1624901 1625111 + 14.6 0.000 intron (NM_001253846, intron 9 of 10) CpG-23107 15091 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr11-2711 chr11 261754 261964 + 14.6 0.000 Intergenic Intergenic -16548 NM_001276700 171389 Hs.352611 NM_138329 ENSG00000174885 NLRP6 AVR|CLR11.4|NALP6|NAVR|NAVR/AVR|PAN3|PYPAF5 NLR family pyrin domain containing 6 protein-coding chr1-4662 chr1 203572104 203572314 + 14.6 0.000 Intergenic Intergenic -54578 NM_001001396 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr1-2414 chr1 246592842 246593052 + 14.6 0.000 intron (NM_152609, intron 2 of 10) intron (NM_152609, intron 2 of 10) 26491 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding chr12-759 chr12 92146043 92146253 + 14.6 0.000 promoter-TSS (NR_135037) promoter-TSS (NR_135037) 63 NR_135036 101928617 Hs.434392 NR_135036 LOC101928617 - uncharacterized LOC101928617 ncRNA chr12-1129 chr12 72230652 72230862 + 14.6 0.000 Intergenic Intergenic -41992 NM_013381 29953 Hs.199814 NM_013381 ENSG00000072657 TRHDE PAP-II|PGPEP2|TRH-DE thyrotropin releasing hormone degrading enzyme protein-coding chr19-1573 chr19 3368204 3368414 + 14.6 0.000 intron (NM_001245002, intron 1 of 10) intron (NM_001245002, intron 1 of 10) 1726 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr2-4166 chr2 181810878 181811088 + 14.6 0.000 Intergenic Intergenic -80747 NM_001287505 6744 Hs.196983 NM_006751 ENSG00000138434 ITPRID2 CS-1|CS1|KRAP|SPAG13|SSFA2 ITPR interacting domain containing 2 protein-coding chr1-6964 chr1 160193272 160193482 + 14.6 0.000 intron (NM_001231, intron 2 of 10) intron (NM_001231, intron 2 of 10) 2802 NM_001231 844 Hs.632476 NM_001231 ENSG00000143318 CASQ1 CASQ|PDIB1|VMCQA calsequestrin 1 protein-coding chr16-1924 chr16 89961528 89961738 + 14.6 0.000 intron (NM_207514, intron 7 of 12) intron (NM_207514, intron 7 of 12) 8256 NR_145807 109623464 NR_145807 SNORA119 - small nucleolar RNA, H/ACA box 119 snoRNA chr19-878 chr19 38300775 38300985 + 14.6 0.000 Intergenic Intergenic -3371 NM_001317801 64073 Hs.631544 NM_022125 ENSG00000167644 C19orf33 H2RSP|IMUP|IMUP-1|IMUP-2 chromosome 19 open reading frame 33 protein-coding chr1-6139 chr1 167457487 167457697 + 14.6 0.000 intron (NM_000734, intron 1 of 7) intron (NM_000734, intron 1 of 7) 60937 NM_000734 919 Hs.156445 NM_000734 ENSG00000198821 CD247 CD3-ZETA|CD3H|CD3Q|CD3Z|IMD25|T3Z|TCRZ CD247 molecule protein-coding chr10-898 chr10 117375214 117375424 + 14.6 0.000 5' UTR (NM_173791, exon 1 of 5) 5' UTR (NM_173791, exon 1 of 5) 121 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr14-1455 chr14 102362099 102362309 + 14.6 0.000 promoter-TSS (NM_001172631) promoter-TSS (NM_001172631) 686 NM_032630 51550 Hs.129634 NM_032630 ENSG00000100865 CINP - cyclin dependent kinase 2 interacting protein protein-coding chr1-2591 chr1 52127538 52127748 + 14.6 0.000 Intergenic Intergenic -14446 NM_007324 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr18-707 chr18 6118515 6118725 + 14.6 0.000 intron (NM_001365769, intron 14 of 16) intron (NM_001365769, intron 14 of 16) -138124 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA chr3-2274 chr3 62789309 62789519 + 14.6 0.000 intron (NM_003716, intron 1 of 29) intron (NM_003716, intron 1 of 29) 86002 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr10-786 chr10 75235904 75236114 + 14.6 0.000 promoter-TSS (NM_144589) promoter-TSS (NM_144589) -52 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr10-1071 chr10 129525715 129525925 + 14.6 0.000 intron (NM_002412, intron 1 of 4) intron (NM_002412, intron 1 of 4) 58579 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr12-2251 chr12 80186731 80186941 + 14.6 0.000 intron (NM_001368062, intron 5 of 62) intron (NM_001368062, intron 5 of 62) -22617 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr5-1329 chr5 134451877 134452087 + 14.6 0.000 Intergenic Intergenic -16935 NR_105044 102546229 NR_105044 LOC102546229 - uncharacterized LOC102546229 ncRNA chr19-1479 chr19 7710416 7710626 + 14.6 0.000 Intergenic Intergenic -8375 NM_002002 2208 Hs.465778 NM_002002 ENSG00000104921 FCER2 BLAST-2|CD23|CD23A|CLEC4J|FCE2|IGEBF Fc fragment of IgE receptor II protein-coding chr1-1434 chr1 111140593 111140803 + 14.6 0.000 promoter-TSS (NM_001349882) promoter-TSS (NM_001349882) 475 NR_138484 10390 Hs.363572 NM_006090 ENSG00000134255 CEPT1 - choline/ethanolamine phosphotransferase 1 protein-coding chr1-2067 chr1 23177680 23177890 + 14.6 0.000 Intergenic CpG -8927 NM_001142546 7798 Hs.257900 NM_033631 ENSG00000169641 LUZP1 LUZP leucine zipper protein 1 protein-coding chr3-3844 chr3 32583852 32584062 + 14.6 0.000 Intergenic Intergenic -13033 NM_001329135 51143 Hs.529495 NM_016141 ENSG00000144635 DYNC1LI1 DLC-A|DNCLI1|LIC1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding chr9-858 chr9 33167173 33167383 + 14.6 0.000 promoter-TSS (NM_001497) promoter-TSS (NM_001497) 80 NM_001497 2683 Hs.272011 NM_001497 ENSG00000086062 B4GALT1 B4GAL-T1|CDG2D|GGTB2|GT1|GTB|beta4Gal-T1 beta-1,4-galactosyltransferase 1 protein-coding chr17-1083 chr17 29389992 29390202 + 14.6 0.000 promoter-TSS (NM_020791) promoter-TSS (NM_020791) -565 NR_039749 100616122 NR_039749 ENSG00000284162 MIR4523 - microRNA 4523 ncRNA chr3-1662 chr3 171771199 171771409 + 14.6 0.000 intron (NM_002662, intron 1 of 26) intron (NM_002662, intron 1 of 26) 39179 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr3-2942 chr3 57394634 57394844 + 14.6 0.000 intron (NM_001366028, intron 43 of 73) MLT1K|LTR|ERVL-MaLR -102054 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chr5-1304 chr5 41835727 41835937 + 14.6 0.000 intron (NM_001364301, intron 7 of 16) intron (NM_001364301, intron 7 of 16) 7825 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr4-1013 chr4 4782260 4782470 + 14.6 0.000 intron (NR_125892, intron 2 of 2) intron (NR_125892, intron 2 of 2) 20605 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr12-859 chr12 14774185 14774395 + 14.6 0.000 promoter-TSS (NR_027716) promoter-TSS (NR_027716) -46 NR_027716 55766 Hs.524280 NM_018267 ENSG00000246705 H2AFJ H2AJ H2A histone family member J protein-coding chr4-1276 chr4 55184346 55184556 + 14.6 0.000 Intergenic Intergenic -58856 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr7-1076 chr7 70092568 70092778 + 14.6 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 494198 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr15-489 chr15 40160933 40161143 + 14.6 0.000 promoter-TSS (NM_001211) promoter-TSS (NM_001211) 29 NM_001211 701 Hs.513645 NM_001211 ENSG00000156970 BUB1B BUB1beta|BUBR1|Bub1A|MAD3L|MVA1|SSK1|hBUBR1 BUB1 mitotic checkpoint serine/threonine kinase B protein-coding chr8-3516 chr8 117039342 117039552 + 14.6 0.000 intron (NM_001172815, intron 2 of 10) intron (NM_001172815, intron 2 of 10) 88472 NM_001172813 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr7-2843 chr7 103297209 103297419 + 14.6 0.000 promoter-TSS (NM_004279) promoter-TSS (NM_004279) -121 NM_004279 9512 Hs.184211 NM_004279 ENSG00000105819 PMPCB Beta-MPP|MPP11|MPPB|MPPP52|P-52 peptidase, mitochondrial processing beta subunit protein-coding chr5-1762 chr5 10424165 10424375 + 14.5 0.000 intron (NM_001270660, intron 22 of 24) MER34B|LTR|ERV1 17581 NR_102746 100505845 Hs.599395 NR_102746 ROPN1L-AS1 - ROPN1L antisense RNA 1 ncRNA chr3-1242 chr3 136464614 136464824 + 14.5 0.000 intron (NM_005862, intron 13 of 33) intron (NM_005862, intron 13 of 33) 214379 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr4-941 chr4 113397196 113397406 + 14.5 0.000 Intergenic Intergenic 104462 NM_001354279 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr8-966 chr8 100570860 100571070 + 14.5 0.000 Intergenic MER21-int|LTR|ERVL -11206 NM_001270377 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr1-1841 chr1 9413761 9413971 + 14.5 0.000 Intergenic Intergenic 15050 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr3-1178 chr3 170441822 170442032 + 14.5 0.000 Intergenic LTR33A|LTR|ERVL 18824 NR_106886 102465497 NR_106886 ENSG00000283474 MIR6828 hsa-mir-6828 microRNA 6828 ncRNA chr2-3875 chr2 38938555 38938765 + 14.5 0.000 intron (NM_001145451, intron 7 of 15) L1MB8|LINE|L1 19297 NM_001145451 100271715 Hs.99841 NM_001145451 ENSG00000214694 ARHGEF33 - Rho guanine nucleotide exchange factor 33 protein-coding chr14-1298 chr14 21217020 21217230 + 14.5 0.000 intron (NM_031314, intron 5 of 8) intron (NM_031314, intron 5 of 8) -10225 NR_038971 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA chr1-3320 chr1 16424662 16424872 + 14.5 0.000 intron (NR_148413, intron 4 of 15) MER103C|DNA|hAT-Charlie 12657 NM_198546 374955 Hs.705501 NM_198546 ENSG00000187144 SPATA21 spergen-2|spergen2 spermatogenesis associated 21 protein-coding chr9-1208 chr9 124749868 124750078 + 14.5 0.000 intron (NM_001278546, intron 1 of 9) intron (NM_001278546, intron 1 of 9) 21338 NM_001489 2649 Hs.20131 NM_001489 ENSG00000148200 NR6A1 CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR nuclear receptor subfamily 6 group A member 1 protein-coding chr5-1146 chr5 150588021 150588231 + 14.5 0.000 Intergenic Intergenic -12950 NM_001166208 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr11-3483 chr11 92190654 92190864 + 14.5 0.000 Intergenic LTR78|LTR|ERV1 -34275 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr1-3377 chr1 172343623 172343833 + 14.5 0.000 intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -76957 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr14-948 chr14 38951571 38951781 + 14.5 0.000 Intergenic Intergenic -34794 NR_039982 283547 Hs.675941 NR_039982 ENSG00000259070 LINC00639 - long intergenic non-protein coding RNA 639 ncRNA chr1-2647 chr1 156902576 156902786 + 14.5 0.000 intron (NM_001353683, intron 2 of 23) intron (NM_001353683, intron 2 of 23) 8950 NM_001080471 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr12-2209 chr12 42799013 42799223 + 14.5 0.000 Intergenic (TATC)n|Simple_repeat|Simple_repeat 106902 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr5-1235 chr5 154353092 154353302 + 14.5 0.000 intron (NM_198321, intron 4 of 11) intron (NM_198321, intron 4 of 11) 6091 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr14-1863 chr14 74038287 74038497 + 14.5 0.000 intron (NM_025057, intron 4 of 11) intron (NM_025057, intron 4 of 11) 19043 NM_025057 80127 Hs.644621 NM_025057 ENSG00000119636 BBOF1 C14orf45|CCDC176 basal body orientation factor 1 protein-coding chr5-2863 chr5 79139532 79139742 + 14.5 0.000 Intergenic LTR16B1|LTR|ERVL 27828 NM_001713 635 Hs.80756 NM_001713 ENSG00000145692 BHMT BHMT1|HEL-S-61p betaine--homocysteine S-methyltransferase protein-coding chr1-3674 chr1 156081084 156081294 + 14.5 0.000 intron (NM_001093725, intron 1 of 1) intron (NM_001093725, intron 1 of 1) 1276 NM_001093725 92312 Hs.591496 NM_001093725 ENSG00000254726 MEX3A MEX-3A|RKHD4|RNF162 mex-3 RNA binding family member A protein-coding chr12-992 chr12 112409572 112409782 + 14.5 0.000 promoter-TSS (NM_001320138) promoter-TSS (NM_001320138) -63 NM_001320137 6128 Hs.528668 NM_000970 ENSG00000089009 RPL6 L6|SHUJUN-2|TAXREB107|TXREB1 ribosomal protein L6 protein-coding chr9-1031 chr9 129725938 129726148 + 14.5 0.000 Intergenic Intergenic -7337 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr7-1676 chr7 117034817 117035027 + 14.5 0.000 intron (NR_161419, intron 1 of 15) intron (NR_161419, intron 1 of 15) 14704 NM_001369606 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr8-716 chr8 28702187 28702397 + 14.5 0.000 promoter-TSS (NR_126027) promoter-TSS (NR_126027) 791 NR_073469 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr11-1342 chr11 9613350 9613560 + 14.5 0.000 Intergenic CpG 38768 NM_001143976 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr11-4082 chr11 26841889 26842099 + 14.5 0.000 Intergenic Intergenic -119934 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr13-584 chr13 98083565 98083775 + 14.5 0.000 Intergenic Intergenic -58919 NM_001286839 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, ARH/RhoGEF and pleckstrin domain protein 1 protein-coding chr2-5499 chr2 142974271 142974481 + 14.5 0.000 intron (NM_001199241, intron 9 of 14) MER4C|LTR|ERV1 96712 NM_003937 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr4-1866 chr4 184537453 184537663 + 14.5 0.000 promoter-TSS (NR_147158) promoter-TSS (NR_147158) 25 NR_147158 105377585 Hs.519127 NR_147158 ENSG00000271538 LINC02427 - long intergenic non-protein coding RNA 2427 ncRNA chr2-2167 chr2 241363507 241363717 + 14.5 0.000 intron (NM_014808, intron 1 of 26) L1MD2|LINE|L1 7327 NM_001282983 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr16-1643 chr16 18762853 18763063 + 14.5 0.000 Intergenic Intergenic 27376 NM_001019 6210 Hs.370504 NM_001019 ENSG00000134419 RPS15A DBA20|S15a ribosomal protein S15a protein-coding chr14-742 chr14 51335688 51335898 + 14.5 0.000 intron (NR_038358, intron 1 of 4) intron (NR_038358, intron 1 of 4) 2400 NR_038358 283553 Hs.325752 NR_038358 ENSG00000258479 LINC00640 - long intergenic non-protein coding RNA 640 ncRNA chr2-2315 chr2 106575995 106576205 + 14.5 0.000 Intergenic L1M8|LINE|L1 88736 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr8-1593 chr8 140790938 140791148 + 14.5 0.000 intron (NR_148037, intron 14 of 34) intron (NR_148037, intron 14 of 34) -58390 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr15-490 chr15 40357909 40358119 + 14.5 0.000 promoter-TSS (NM_033510) promoter-TSS (NM_033510) -205 NM_033510 85455 Hs.355645 NM_033510 ENSG00000140323 DISP2 C15orf36|DISPB|HsT16908|LINC00594 dispatched RND transporter family member 2 protein-coding chr6-959 chr6 20179730 20179940 + 14.5 0.000 intron (NM_001080480, intron 1 of 12) L1PA11|LINE|L1 32634 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr1-3137 chr1 59101090 59101300 + 14.5 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 45612 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr22-857 chr22 31734534 31734744 + 14.5 0.000 intron (NM_173566, intron 2 of 8) L3|LINE|CR1 15493 NM_173566 253143 Hs.438906 NM_173566 ENSG00000183530 PRR14L C22orf30 proline rich 14 like protein-coding chr4-5371 chr4 187147504 187147714 + 14.5 0.000 Intergenic Intergenic -54377 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr5-1397 chr5 139668864 139669074 + 14.5 0.000 intron (NM_001317203, intron 2 of 3) intron (NM_001317203, intron 2 of 3) -6474 NM_001317208 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr17-4965 chr17 79592622 79592832 + 14.5 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 18324 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr20-1370 chr20 46217346 46217556 + 14.5 0.000 intron (NM_021248, intron 4 of 11) (ACAC)n|Simple_repeat|Simple_repeat 91047 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr17-1351 chr17 49779900 49780110 + 14.5 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -8676 NM_001346706 11143 Hs.21907 NM_007067 ENSG00000136504 KAT7 HBO1|HBOA|MYST2|ZC2HC7 lysine acetyltransferase 7 protein-coding chr1-2363 chr1 52424333 52424543 + 14.5 0.000 intron (NM_001009881, intron 29 of 29) intron (NM_001009881, intron 29 of 29) 19836 NM_032864 84950 Hs.5301 NM_032284 ENSG00000134748 PRPF38A PRP38A|Prp38 pre-mRNA processing factor 38A protein-coding chr13-1176 chr13 40440967 40441177 + 14.5 0.000 intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 39934 NR_024506 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr7-628 chr7 56064254 56064464 + 14.5 0.000 promoter-TSS (NM_001130069) promoter-TSS (NM_001130069) 73 NM_001042469 25870 Hs.279696 NM_015411 ENSG00000129103 SUMF2 pFGE sulfatase modifying factor 2 protein-coding chr18-629 chr18 12437895 12438105 + 14.5 0.000 intron (NR_136514, intron 2 of 5) intron (NR_136514, intron 2 of 5) 5226 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chr10-1398 chr10 76649882 76650092 + 14.5 0.000 Intergenic Intergenic -238057 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr3-2405 chr3 190013568 190013778 + 14.5 0.000 intron (NM_001134418, intron 1 of 14) intron (NM_001134418, intron 1 of 14) 107224 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr3-2260 chr3 52546056 52546266 + 14.5 0.000 3' UTR (NM_001366075, exon 31 of 31) 3' UTR (NM_001366075, exon 31 of 31) 9556 NM_001124767 440957 Hs.660577 NM_001124767 ENSG00000168273 SMIM4 C3orf78 small integral membrane protein 4 protein-coding chr2-4215 chr2 212032048 212032258 + 14.5 0.000 intron (NM_001042599, intron 2 of 26) intron (NM_001042599, intron 2 of 26) 394207 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr1-1961 chr1 110258779 110258989 + 14.5 0.000 Intergenic (CCT)n|Simple_repeat|Simple_repeat 48570 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chrX-210 chrX 51496358 51496568 + 14.5 0.000 5' UTR (NM_018159, exon 1 of 2) 5' UTR (NM_018159, exon 1 of 2) 129 NM_018159 55190 Hs.200016 NM_018159 ENSG00000196368 NUDT11 APS1|ASP1|DIPP3b|DIPP3beta|hDIPP3beta nudix hydrolase 11 protein-coding chr16-2179 chr16 69404528 69404738 + 14.5 0.000 Intergenic Intergenic -18626 NM_005652 7014 Hs.63335 NM_005652 ENSG00000132604 TERF2 TRBF2|TRF2 telomeric repeat binding factor 2 protein-coding chr13-662 chr13 73871409 73871619 + 14.5 0.000 intron (NM_007249, intron 3 of 7) intron (NM_007249, intron 3 of 7) 262415 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr11-7029 chr11 118670363 118670573 + 14.5 0.000 intron (NM_007180, intron 1 of 14) intron (NM_007180, intron 1 of 14) 9182 NM_001301065 11181 Hs.129712 NM_007180 ENSG00000118094 TREH TRE|TREA|TREHD trehalase protein-coding chr13-150 chr13 99606471 99606681 + 14.5 0.000 promoter-TSS (NM_206808) promoter-TSS (NM_206808) -88 NM_206808 171425 Hs.655642 NM_206808 ENSG00000125246 CLYBL CLB citrate lyase beta like protein-coding chr11-1237 chr11 67010429 67010639 + 14.5 0.000 Intergenic Intergenic -12259 NM_001318773 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr11-3554 chr11 29093485 29093695 + 14.5 0.000 Intergenic Intergenic -500823 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr13-822 chr13 36164178 36164388 + 14.5 0.000 Intergenic Intergenic -32344 NM_001330072 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr12-783 chr12 30851082 30851292 + 14.5 0.000 Intergenic LTR13_|LTR|ERVK 55506 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr15-1239 chr15 71325381 71325591 + 14.5 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -136427 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr6-1258 chr6 35469917 35470127 + 14.5 0.000 promoter-TSS (NR_106961) promoter-TSS (NR_106961) -486 NR_106961 102465668 NR_106961 ENSG00000276712 MIR7111 hsa-mir-7111 microRNA 7111 ncRNA chr15-715 chr15 45587438 45587648 + 14.5 0.000 promoter-TSS (NR_132350) promoter-TSS (NR_132350) -17 NM_001311255 26258 Hs.7037 NM_012388 ENSG00000104164 BLOC1S6 BLOS6|HPS9|PA|PALLID|PLDN biogenesis of lysosomal organelles complex 1 subunit 6 protein-coding chr1-3960 chr1 117803531 117803741 + 14.5 0.000 Intergenic Intergenic 125985 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr1-4507 chr1 29165557 29165767 + 14.5 0.000 intron (NM_005626, intron 1 of 5) intron (NM_005626, intron 1 of 5) 16238 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding chr3-1856 chr3 111316038 111316248 + 14.5 0.000 Intergenic Intergenic -226054 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr10-1209 chr10 12067334 12067544 + 14.5 0.000 Intergenic L2c|LINE|L2 -1515 NM_018706 55526 Hs.104980 NM_018706 ENSG00000181192 DHTKD1 AMOXAD|CMT2Q dehydrogenase E1 and transketolase domain containing 1 protein-coding chr17-5007 chr17 82490415 82490625 + 14.5 0.000 TTS (NM_001083608) TTS (NM_001083608) -29212 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr17-768 chr17 29567835 29568045 + 14.5 0.000 promoter-TSS (NM_198147) promoter-TSS (NM_198147) -336 NM_001346077 90313 Hs.514050 NM_138349 ENSG00000167543 TP53I13 DSCP1 tumor protein p53 inducible protein 13 protein-coding chr20-653 chr20 38033477 38033687 + 14.5 0.000 promoter-TSS (NM_014657) promoter-TSS (NM_014657) -126 NM_014657 9675 Hs.655481 NM_014657 ENSG00000101407 TTI1 KIAA0406|smg-10 TELO2 interacting protein 1 protein-coding chr19-1246 chr19 46788469 46788679 + 14.5 0.000 promoter-TSS (NM_005628) promoter-TSS (NM_005628) 20 NM_005628 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding chr7-3633 chr7 42143725 42143935 + 14.5 0.000 intron (NM_000168, intron 3 of 14) intron (NM_000168, intron 3 of 14) 93379 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr5-2900 chr5 121720486 121720696 + 14.5 0.000 Intergenic L1PA8|LINE|L1 -131291 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr16-2140 chr16 27375027 27375237 + 14.5 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -27042 NM_181079 50615 Hs.210546 NM_021798 ENSG00000103522 IL21R CD360|IMD56|NILR interleukin 21 receptor protein-coding chr9-1060 chr9 88953319 88953529 + 14.5 0.000 Intergenic Intergenic -37439 NM_001001938 286223 Hs.585118 NM_001001938 ENSG00000213694 C9orf47 C9orf108|bA791O21.3 chromosome 9 open reading frame 47 protein-coding chr8-651 chr8 118209189 118209399 + 14.5 0.000 intron (NM_001101676, intron 4 of 4) intron (NM_001101676, intron 4 of 4) -97475 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chrX-394 chrX 10833496 10833706 + 14.5 0.000 promoter-TSS (NM_033290) promoter-TSS (NM_033290) 82 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr8-1396 chr8 37099916 37100126 + 14.5 0.000 Intergenic Intergenic 315647 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr3-2493 chr3 155872182 155872392 + 14.5 0.000 intron (NM_003875, intron 1 of 15) intron (NM_003875, intron 1 of 15) 1637 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr9-2694 chr9 79026404 79026614 + 14.5 0.000 Intergenic L2|LINE|L2 119157 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr12-1457 chr12 130871002 130871212 + 14.5 0.000 promoter-TSS (NM_001300796) promoter-TSS (NM_001300796) -887 NM_001300796 5901 Hs.10842 NM_006325 ENSG00000132341 RAN ARA24|Gsp1|TC4 RAN, member RAS oncogene family protein-coding chr12-1872 chr12 53428329 53428539 + 14.5 0.000 intron (NM_020547, intron 6 of 10) intron (NM_020547, intron 6 of 10) 4579 NM_020547 269 Hs.659889 NM_020547 ENSG00000135409 AMHR2 AMHR|MISR2|MISRII|MRII anti-Mullerian hormone receptor type 2 protein-coding chr4-1814 chr4 72591750 72591960 + 14.5 0.000 Intergenic Intergenic -22634 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr16-932 chr16 28974144 28974354 + 14.5 0.000 promoter-TSS (NM_001142448) promoter-TSS (NM_001142448) -529 NM_001142448 83985 Hs.617449 NM_032038 ENSG00000169682 SPNS1 HSpin1|LAT|PP2030|SLC62A1|SPIN1|SPINL|nrs sphingolipid transporter 1 (putative) protein-coding chr6-2897 chr6 12664542 12664752 + 14.5 0.000 Intergenic Intergenic -52120 NM_001322308 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr17-1028 chr17 50057077 50057287 + 14.5 0.000 intron (NM_002204, intron 1 of 25) intron (NM_002204, intron 1 of 25) 1072 NM_002204 3675 Hs.265829 NM_002204 ENSG00000005884 ITGA3 CD49C|FRP-2|GAP-B3|GAPB3|ILNEB|MSK18|VCA-2|VL3A|VLA3a integrin subunit alpha 3 protein-coding chr2-2307 chr2 86584246 86584456 + 14.5 0.000 intron (NM_001198954, intron 3 of 7) L1MEc|LINE|L1 -20908 NM_001005753 51652 Hs.591582 NM_016079 ENSG00000115561 CHMP3 CGI-149|NEDF|VPS24 charged multivesicular body protein 3 protein-coding chr17-1507 chr17 42054193 42054403 + 14.5 0.000 Intergenic Intergenic -3697 NM_001358661 110806298 Hs.127116 NM_001358661 ENSG00000267221 C17orf113 - chromosome 17 open reading frame 113 protein-coding chr11-1713 chr11 76266385 76266595 + 14.5 0.000 Intergenic Intergenic -59988 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr8-1336 chr8 40174745 40174955 + 14.5 0.000 Intergenic Intergenic 21368 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chrX-206 chrX 16185697 16185907 + 14.5 0.000 Intergenic Intergenic 18321 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - MAGE family member B17 protein-coding chr22-472 chr22 49960473 49960683 + 14.5 0.000 promoter-TSS (NM_001001852) promoter-TSS (NM_001001852) -194 NM_001001852 415116 Hs.530381 NM_001001852 ENSG00000198355 PIM3 pim-3 Pim-3 proto-oncogene, serine/threonine kinase protein-coding chr17-2280 chr17 29959229 29959439 + 14.5 0.000 intron (NR_026738, intron 3 of 15) L1M1|LINE|L1 17700 NM_198529 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr3-2464 chr3 111277287 111277497 + 14.5 0.000 Intergenic Intergenic 205576 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr2-2945 chr2 12620045 12620255 + 14.5 0.000 Intergenic Intergenic -96722 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr8-1532 chr8 93944532 93944742 + 14.5 0.000 Intergenic L1M4b|LINE|L1 27690 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr18-526 chr18 62938138 62938348 + 14.5 0.000 intron (NM_194449, intron 10 of 16) intron (NM_194449, intron 10 of 16) 222702 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr8-959 chr8 91840405 91840615 + 14.5 0.000 Intergenic Intergenic 177170 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr12-1261 chr12 52442896 52443106 + 14.5 0.000 Intergenic Intergenic -8630 NM_004693 9119 Hs.697046 NM_004693 ENSG00000170454 KRT75 K6HF|KB18|PFB keratin 75 protein-coding chr1-5211 chr1 183061124 183061334 + 14.5 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 37809 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr9-3415 chr9 134034227 134034437 + 14.5 0.000 intron (NM_007371, intron 11 of 11) intron (NM_007371, intron 11 of 11) 8851 NM_001355256 266655 Hs.654869 NM_001355256 ENSG00000235106 BRD3OS LINC00094|LP2477|NCRNA00094 BRD3 opposite strand protein-coding chr8-1134 chr8 127225210 127225420 + 14.5 0.000 Intergenic Intergenic -6047 NR_108049 100507056 Hs.343864 NR_108049 CCAT1 CARLO5|CARLo-5|onco-lncRNA-40 colon cancer associated transcript 1 ncRNA chr14-1082 chr14 25111419 25111629 + 14.5 0.000 Intergenic Intergenic -61227 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr20-313 chr20 63288810 63289020 + 14.5 0.000 non-coding (NR_104023, exon 4 of 4) non-coding (NR_104023, exon 4 of 4) 2107 NR_036220 100422945 NR_036220 ENSG00000266104 MIR4326 mir-4326 microRNA 4326 ncRNA chr19-1797 chr19 467682 467892 + 14.5 0.000 intron (NM_182577, intron 2 of 3) intron (NM_182577, intron 2 of 3) -6791 NM_012435 25759 Hs.30965 NM_012435 ENSG00000129946 SHC2 SCK|SHCB|SLI SHC adaptor protein 2 protein-coding chr4-1093 chr4 168560336 168560546 + 14.5 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) 63389 NM_016081 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr3-2044 chr3 127383505 127383715 + 14.5 0.000 intron (NR_110147, intron 1 of 4) intron (NR_110147, intron 1 of 4) 7060 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr8-842 chr8 132482737 132482947 + 14.5 0.000 Intergenic Intergenic -1747 NM_004519 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr6-5222 chr6 134465742 134465952 + 14.5 0.000 intron (NR_038216, intron 2 of 2) MIRc|SINE|MIR 13050 NR_125852 101928231 Hs.634168 NR_125852 CT69 - cancer/testis associated transcript 69 ncRNA chr14-894 chr14 33986962 33987172 + 14.5 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -35993 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr5-1272 chr5 126811119 126811329 + 14.5 0.000 intron (NR_134488, intron 4 of 11) intron (NR_134488, intron 4 of 11) 34088 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr6-548 chr6 8435555 8435765 + 14.5 0.000 promoter-TSS (NR_109913) promoter-TSS (NR_109913) 37 NR_038980 100506207 Hs.311049 NR_038979 ENSG00000285219 LOC100506207 - uncharacterized LOC100506207 ncRNA chr22-774 chr22 39936959 39937169 + 14.5 0.000 intron (NM_001291828, intron 1 of 4) intron (NM_001291828, intron 1 of 4) -9753 NM_001291825 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chr3-5774 chr3 23921723 23921933 + 14.5 0.000 TTS (NM_002948) TTS (NM_002948) 4696 NM_001253383 6138 Hs.381219 NM_002948 ENSG00000174748 RPL15 DBA12|EC45|L15|RPL10|RPLY10|RPYL10 ribosomal protein L15 protein-coding chr10-2163 chr10 116748205 116748415 + 14.5 0.000 intron (NM_001330164, intron 2 of 12) intron (NM_001330164, intron 2 of 12) -5744 NM_025015 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding chr10-2374 chr10 99392382 99392592 + 14.5 0.000 non-coding (NR_144311, exon 11 of 11) non-coding (NR_144311, exon 11 of 11) 38137 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr11-4341 chr11 72694786 72694996 + 14.5 0.000 intron (NR_161388, intron 23 of 29) intron (NR_161388, intron 23 of 29) -5583 NR_146780 100506020 Hs.503165 NR_146780 ENSG00000245148 ARAP1-AS2 - ARAP1 antisense RNA 2 ncRNA chr5-3723 chr5 22435282 22435492 + 14.5 0.000 intron (NM_004061, intron 2 of 14) MLT2A2|LTR|ERVL -221537 NM_001364107 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr9-1966 chr9 93575820 93576030 + 14.5 0.000 promoter-TSS (NM_005392) promoter-TSS (NM_005392) -659 NM_005392 5253 Hs.211441 NM_005392 ENSG00000197724 PHF2 CENP-35|GRC5|JHDM1E|KDM7C PHD finger protein 2 protein-coding chr22-778 chr22 41563323 41563533 + 14.5 0.000 intron (NM_014460, intron 1 of 3) intron (NM_014460, intron 1 of 3) 2418 NM_014460 27254 Hs.310893 NM_014460 ENSG00000172346 CSDC2 PIPPIN|dJ347H13.2 cold shock domain containing C2 protein-coding chr7-2448 chr7 134886810 134887020 + 14.5 0.000 intron (NM_033157, intron 3 of 14) intron (NM_033157, intron 3 of 14) -4485 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr11-1736 chr11 110429796 110430006 + 14.5 0.000 promoter-TSS (NM_004109) promoter-TSS (NM_004109) -47 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chr1-6014 chr1 55338166 55338376 + 14.5 0.000 Intergenic LTR41C|LTR|ERVL 112630 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr15-665 chr15 67142912 67143122 + 14.5 0.000 intron (NM_001145103, intron 1 of 8) intron (NM_001145103, intron 1 of 8) 4996 NM_001145103 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr18-395 chr18 3305336 3305546 + 14.5 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 42722 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr17-1685 chr17 7043294 7043504 + 14.5 0.000 exon (NM_153357, exon 1 of 4) exon (NM_153357, exon 1 of 4) 518 NM_153357 162515 Hs.336564 NM_153357 ENSG00000174326 SLC16A11 MCT 11|MCT11 solute carrier family 16 member 11 protein-coding chr11-4365 chr11 74550823 74551033 + 14.5 0.000 Intergenic Intergenic -41654 NR_046409 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr5-1145 chr5 143507444 143507654 + 14.5 0.000 Intergenic Intergenic -72037 NM_001018077 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr19-1108 chr19 4713740 4713950 + 14.5 0.000 intron (NM_139159, intron 4 of 21) intron (NM_139159, intron 4 of 21) 9997 NM_139159 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr19-4933 chr19 44137732 44137942 + 14.5 0.000 Intergenic L1M4|LINE|L1 -3717 NM_006630 10780 Hs.235992 NM_006630 ENSG00000263002 ZNF234 HZF4|ZNF269 zinc finger protein 234 protein-coding chr11-682 chr11 356181 356391 + 14.5 0.000 Intergenic CpG -13213 NM_178537 338707 Hs.148074 NM_178537 ENSG00000182272 B4GALNT4 - beta-1,4-N-acetyl-galactosaminyltransferase 4 protein-coding chr7-2058 chr7 129376512 129376722 + 14.5 0.000 intron (NM_001130722, intron 1 of 16) intron (NM_001130722, intron 1 of 16) 779 NM_001130722 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr11-4428 chr11 93980749 93980959 + 14.5 0.000 Intergenic Intergenic -40500 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chr1-3846 chr1 31843348 31843558 + 14.5 0.000 Intergenic MIRb|SINE|MIR -27402 NM_144569 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chrX-2564 chrX 101424867 101425077 + 14.5 0.000 intron (NR_028407, intron 2 of 15) L2c|LINE|L2 6694 NR_028407 100131755 Hs.729062 NM_152583 ENSG00000196440 ARMCX4 CXorf35|GASP4 armadillo repeat containing X-linked 4 protein-coding chr9-938 chr9 96654476 96654686 + 14.5 0.000 intron (NM_153698, intron 2 of 5) intron (NM_153698, intron 2 of 5) 736 NM_153698 195827 Hs.44640 NM_153698 ENSG00000158122 PRXL2C AAED1|C9orf21 peroxiredoxin like 2C protein-coding chr16-2975 chr16 12729660 12729870 + 14.5 0.000 intron (NM_018340, intron 2 of 3) HAL1|LINE|L1 9444 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr1-3925 chr1 87149644 87149854 + 14.5 0.000 intron (NR_026989, intron 2 of 2) intron (NR_026989, intron 2 of 2) 17823 NR_026986 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr11-1241 chr11 72387988 72388198 + 14.5 0.000 intron (NM_001258393, intron 2 of 14) intron (NM_001258393, intron 2 of 14) 46438 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr1-869 chr1 192808839 192809049 + 14.5 0.000 promoter-TSS (NM_002923) promoter-TSS (NM_002923) -95 NM_002923 5997 Hs.78944 NM_002923 ENSG00000116741 RGS2 G0S8 regulator of G protein signaling 2 protein-coding chr1-2552 chr1 14988307 14988517 + 14.5 0.000 intron (NM_001370231, intron 3 of 8) intron (NM_001370231, intron 3 of 8) 42493 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr2-5975 chr2 58266013 58266223 + 14.5 0.000 Intergenic ERVL-E-int|LTR|ERVL -9759 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA chrX-234 chrX 49072007 49072217 + 14.5 0.000 intron (NM_007213, intron 2 of 2) CpG 1890 NM_007213 11230 Hs.29595 NM_007213 ENSG00000243279 PRAF2 JM4|Yip6a PRA1 domain family member 2 protein-coding chr16-2414 chr16 72474573 72474783 + 14.5 0.000 intron (NR_159371, intron 3 of 5) intron (NR_159371, intron 3 of 5) 190292 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr6-1850 chr6 22113151 22113361 + 14.5 0.000 intron (NR_015410, intron 9 of 11) intron (NR_015410, intron 9 of 11) 33937 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr13-1063 chr13 28476277 28476487 + 14.5 0.000 intron (NM_002019, intron 1 of 29) intron (NM_002019, intron 1 of 29) 18746 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr2-5447 chr2 121722009 121722219 + 14.5 0.000 intron (NR_037857, intron 3 of 3) Cheshire|DNA|hAT-Charlie 14761 NM_032390 84365 Hs.367842 NM_032390 ENSG00000155438 NIFK MKI67IP|Nopp34 nucleolar protein interacting with the FHA domain of MKI67 protein-coding chr2-2149 chr2 191942662 191942872 + 14.5 0.000 Intergenic Intergenic -95679 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr1-837 chr1 1891646 1891856 + 14.5 0.000 promoter-TSS (NM_002074) promoter-TSS (NM_002074) -634 NM_001282538 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr12-1757 chr12 78194499 78194709 + 14.5 0.000 intron (NM_001024383, intron 34 of 39) intron (NM_001024383, intron 34 of 39) 165142 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr19-1701 chr19 18894553 18894763 + 14.5 0.000 intron (NM_001290265, intron 1 of 5) intron (NM_001290265, intron 1 of 5) 1500 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr22-1033 chr22 36123895 36124105 + 14.5 0.000 Intergenic Intergenic 36755 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chrX-2694 chrX 119477937 119478147 + 14.5 0.000 Intergenic Intergenic -8922 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr2-1412 chr2 111071708 111071918 + 14.5 0.000 intron (NM_001371254, intron 17 of 18) intron (NM_001371254, intron 17 of 18) 43775 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr11-1751 chr11 126973223 126973433 + 14.5 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) 15214 NR_036126 100422918 NR_036126 ENSG00000266215 MIR3167 - microRNA 3167 ncRNA chr12-1906 chr12 78118583 78118793 + 14.5 0.000 intron (NM_001024383, intron 14 of 39) intron (NM_001024383, intron 14 of 39) 241058 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr10-2520 chr10 47068525 47068735 + 14.5 0.000 Intergenic Intergenic 156908 NM_001352533 26095 Hs.440733 NM_015605 ENSG00000204179 PTPN20 CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 protein tyrosine phosphatase non-receptor type 20 protein-coding chr11-4180 chr11 58866933 58867143 + 14.5 0.000 Intergenic Intergenic -22334 NM_145016 219970 Hs.254271 NM_145016 ENSG00000156689 GLYATL2 BXMAS2-10|GATF-B glycine-N-acyltransferase like 2 protein-coding chrX-718 chrX 136426050 136426260 + 14.5 0.000 Intergenic L2a|LINE|L2 -61792 NM_001727 680 Hs.121484 NM_001727 ENSG00000102239 BRS3 BB3|BB3R|BBR3 bombesin receptor subtype 3 protein-coding chr16-949 chr16 70761217 70761427 + 14.5 0.000 intron (NR_034083, intron 3 of 5) intron (NR_034083, intron 3 of 5) 6227 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr6-1566 chr6 1285989 1286199 + 14.5 0.000 Intergenic Intergenic -26004 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr1-2827 chr1 44406411 44406621 + 14.5 0.000 intron (NM_018150, intron 1 of 14) CpG 1261 NM_018150 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr6-2299 chr6 104710562 104710772 + 14.5 0.000 Intergenic Intergenic 148879 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr9-2118 chr9 95507111 95507321 + 14.5 0.000 promoter-TSS (NM_001083607) promoter-TSS (NM_001083607) -17 NM_001083607 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr11-2005 chr11 47552132 47552342 + 14.5 0.000 intron (NM_006560, intron 1 of 13) intron (NM_006560, intron 1 of 13) 895 NM_006560 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr12-1776 chr12 94709234 94709444 + 14.5 0.000 Intergenic Intergenic -58782 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr20-948 chr20 32355126 32355336 + 14.5 0.000 Intergenic Intergenic -3113 NM_001164603 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chr1-3990 chr1 156900911 156901121 + 14.5 0.000 intron (NM_001080471, intron 1 of 22) intron (NM_001080471, intron 1 of 22) 7285 NM_001080471 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr15-644 chr15 40382909 40383119 + 14.5 0.000 exon (NM_001142762, exon 1 of 8) exon (NM_001142762, exon 1 of 8) 293 NM_033286 90417 Hs.525796 NM_033286 ENSG00000128944 KNSTRN C15orf23|HSD11|SKAP|TRAF4AF1 kinetochore localized astrin (SPAG5) binding protein protein-coding chr17-923 chr17 40647830 40648040 + 14.5 0.000 promoter-TSS (NM_003079) promoter-TSS (NM_003079) -117 NM_003079 6605 Hs.743978 NM_003079 ENSG00000073584 SMARCE1 BAF57|CSS5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding chr1-1800 chr1 111449039 111449249 + 14.5 0.000 promoter-TSS (NM_001688) promoter-TSS (NM_001688) 112 NM_024102 79084 Hs.204773 NM_024102 ENSG00000116455 WDR77 HKMT1069|MEP-50|MEP50|Nbla10071|p44|p44/Mep50 WD repeat domain 77 protein-coding chr17-3131 chr17 38910943 38911153 + 14.5 0.000 intron (NR_073384, intron 5 of 7) intron (NR_073384, intron 5 of 7) -3931 NR_106837 102465467 NR_106837 ENSG00000277057 MIR6779 hsa-mir-6779 microRNA 6779 ncRNA chr17-1329 chr17 9432873 9433083 + 14.5 0.000 intron (NM_004853, intron 6 of 7) intron (NM_004853, intron 6 of 7) 142842 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr2-1397 chr2 65432593 65432803 + 14.5 0.000 promoter-TSS (NM_181784) promoter-TSS (NM_181784) -99 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2-2975 chr2 36364266 36364476 + 14.5 0.000 intron (NM_016441, intron 1 of 16) L2c|LINE|L2 8593 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr9-3634 chr9 91817971 91818181 + 14.5 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 132152 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr14-1188 chr14 67396682 67396892 + 14.5 0.000 intron (NM_016445, intron 2 of 8) L2a|LINE|L2 15378 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr1-1733 chr1 85314158 85314368 + 14.5 0.000 Intergenic Intergenic -37631 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr19-1656 chr19 39363537 39363747 + 14.5 0.000 intron (NM_018028, intron 5 of 15) MIR|SINE|MIR 21183 NM_001303614 55095 Hs.612332 NM_018028 ENSG00000179134 SAMD4B SMGB|Smaug2 sterile alpha motif domain containing 4B protein-coding chr5-4998 chr5 81544897 81545107 + 14.5 0.000 intron (NM_012446, intron 4 of 16) MLT1J2|LTR|ERVL-MaLR -150868 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr15-1396 chr15 40747014 40747224 + 14.5 0.000 intron (NM_001323894, intron 4 of 12) intron (NM_001323894, intron 4 of 12) 8135 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chr21-282 chr21 25957506 25957716 + 14.5 0.000 intron (NM_001136131, intron 9 of 15) intron (NM_001136131, intron 9 of 15) 182779 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr7-2053 chr7 121195919 121196129 + 14.5 0.000 intron (NM_001105533, intron 15 of 17) intron (NM_001105533, intron 15 of 17) -129343 NM_016087 51384 Hs.272375 NM_016087 ENSG00000002745 WNT16 - Wnt family member 16 protein-coding chr2-5035 chr2 237045464 237045674 + 14.5 0.000 Intergenic Intergenic 10598 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr2-9267 chr2 220959665 220959875 + 14.5 0.000 Intergenic L1MEg1|LINE|L1 612534 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr10-2487 chr10 31816456 31816666 + 14.5 0.000 intron (NM_001270696, intron 11 of 17) intron (NM_001270696, intron 11 of 17) 92365 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr16-790 chr16 67465839 67466049 + 14.5 0.000 intron (NM_004691, intron 1 of 7) intron (NM_004691, intron 1 of 7) 15213 NM_004691 9114 Hs.106876 NM_004691 ENSG00000159720 ATP6V0D1 ATP6D|ATP6DV|P39|VATX|VMA6|VPATPD ATPase H+ transporting V0 subunit d1 protein-coding chr8-444 chr8 232362 232572 + 14.5 0.000 promoter-TSS (NM_001042415) promoter-TSS (NM_001042415) 11 NM_001042416 169270 Hs.591388 NM_173539 ENSG00000172748 ZNF596 - zinc finger protein 596 protein-coding chr5-1290 chr5 493453 493663 + 14.5 0.000 intron (NM_001284351, intron 1 of 16) intron (NM_001284351, intron 1 of 16) 20322 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr18-741 chr18 57793501 57793711 + 14.5 0.000 intron (NM_005603, intron 1 of 27) L2a|LINE|L2 9709 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chrX-504 chrX 81259017 81259227 + 14.5 0.000 intron (NM_003022, intron 1 of 3) intron (NM_003022, intron 1 of 3) 57020 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr7-3135 chr7 54996906 54997116 + 14.5 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -22006 NM_201284 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr9-824 chr9 95078973 95079183 + 14.5 0.000 intron (NM_032823, intron 12 of 14) intron (NM_032823, intron 12 of 14) -6130 NR_029664 407011 NR_029664 ENSG00000207563 MIR23B MIRN23B|hsa-mir-23b|miRNA23B|mir-23b microRNA 23b ncRNA chr19-2702 chr19 18948600 18948810 + 14.5 0.000 Intergenic Intergenic -7488 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr10-2004 chr10 58653143 58653353 + 14.5 0.000 intron (NM_001080512, intron 2 of 20) Charlie13a|DNA|hAT-Charlie -61767 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr22-642 chr22 26719056 26719266 + 14.5 0.000 intron (NR_110543, intron 2 of 5) intron (NR_110543, intron 2 of 5) 46318 NR_110543 102724827 Hs.642767 NR_110543 MIATNB - MIAT neighbor ncRNA chr20-323 chr20 327220 327430 + 14.5 0.000 3' UTR (NM_006943, exon 1 of 1) 3' UTR (NM_006943, exon 1 of 1) 1754 NM_006943 6666 Hs.43627 NM_006943 ENSG00000177732 SOX12 SOX22 SRY-box transcription factor 12 protein-coding chr7-1267 chr7 84638114 84638324 + 14.5 0.000 Intergenic Intergenic 105743 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr3-2212 chr3 24299853 24300063 + 14.5 0.000 intron (NM_001354710, intron 2 of 10) intron (NM_001354710, intron 2 of 10) 148634 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr17-2878 chr17 35068457 35068667 + 14.5 0.000 intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) -4855 NM_001017368 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr1-4213 chr1 119613974 119614184 + 14.5 0.000 Intergenic Intergenic -14788 NR_036540 644242 Hs.515383 NR_036540 ENSG00000260941 LINC00622 - long intergenic non-protein coding RNA 622 ncRNA chr2-4919 chr2 156316932 156317142 + 14.5 0.000 Intergenic Intergenic 15684 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr22-729 chr22 37743331 37743541 + 14.5 0.000 TTS (NR_160696) TTS (NR_160696) 2508 NR_160696 102724378 NR_160696 LOC102724378 - uncharacterized LOC102724378 ncRNA chr2-3194 chr2 216652861 216653071 + 14.5 0.000 intron (NM_000597, intron 1 of 3) intron (NM_000597, intron 1 of 3) -6601 NM_001313990 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chrX-2658 chrX 114538055 114538265 + 14.5 0.000 Intergenic L1MB7|LINE|L1 -45918 NM_001256760 3358 Hs.149037 NM_000868 ENSG00000147246 HTR2C 5-HT1C|5-HT2C|5-HTR2C|5HTR2C|HTR1C 5-hydroxytryptamine receptor 2C protein-coding chr20-1521 chr20 39081214 39081424 + 14.5 0.000 Intergenic Intergenic 118975 NR_033905 60625 Hs.444520 NM_021931 ENSG00000101452 DHX35 C20orf15|DDX35|KAIA0875 DEAH-box helicase 35 protein-coding chr13-539 chr13 76516071 76516281 + 14.5 0.000 Intergenic LTR78|LTR|ERV1 370229 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr3-1532 chr3 177905553 177905763 + 14.5 0.000 Intergenic Intergenic 88793 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr4-1123 chr4 128338813 128339023 + 14.5 0.000 Intergenic Intergenic -51105 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chr4-4340 chr4 36882870 36883080 + 14.5 0.000 Intergenic Intergenic -118804 NR_134669 100508631 Hs.397553 NR_134669 ENSG00000261761 LINC02616 - long intergenic non-protein coding RNA 2616 ncRNA chr13-1037 chr13 75760138 75760348 + 14.5 0.000 promoter-TSS (NM_001366634) promoter-TSS (NM_001366634) -77 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr3-692 chr3 43999109 43999319 + 14.5 0.000 Intergenic CpG -114998 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr10-1731 chr10 110398755 110398965 + 14.5 0.000 Intergenic Intergenic -93940 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding ML143366.1-1 ML143366.1 150465 150675 + 14.5 0.000 NA NA NA NA chr17-1449 chr17 40191896 40192106 + 14.5 0.000 intron (NM_016339, intron 10 of 14) intron (NM_016339, intron 10 of 14) -1596 NR_106927 102465523 NR_106927 ENSG00000274621 MIR6867 hsa-mir-6867 microRNA 6867 ncRNA chr12-1878 chr12 55742892 55743102 + 14.5 0.000 promoter-TSS (NM_005811) promoter-TSS (NM_005811) -125 NM_005811 10220 Hs.600883 NM_005811 ENSG00000135414 GDF11 BMP-11|BMP11 growth differentiation factor 11 protein-coding chr3-2096 chr3 32269416 32269626 + 14.5 0.000 intron (NM_001320308, intron 1 of 2) intron (NM_001320308, intron 1 of 2) 30841 NM_178868 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr2-2893 chr2 217951188 217951398 + 14.5 0.000 Intergenic Intergenic -7223 NM_022648 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chrX-459 chrX 150689096 150689306 + 14.5 0.000 Intergenic LTR40A1|LTR|ERVL -3761 NM_001353994 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr10-2283 chr10 9284005 9284215 + 14.5 0.000 intron (NR_108039, intron 1 of 1) intron (NR_108039, intron 1 of 1) 8497 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr12-1595 chr12 14836313 14836523 + 14.5 0.000 intron (NM_021071, intron 2 of 2) Tigger7|DNA|TcMar-Tigger 7108 NM_021071 420 Hs.591158 NM_021071 ENSG00000111339 ART4 ARTC4|CD297|DO|DO/ART4|DOK1 ADP-ribosyltransferase 4 (Dombrock blood group) protein-coding chr5-2457 chr5 135630749 135630959 + 14.5 0.000 intron (NM_001349335, intron 2 of 10) AluSx1|SINE|Alu 23081 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr7-3414 chr7 137937148 137937358 + 14.5 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) -4265 NM_001318246 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr14-1264 chr14 49852806 49853016 + 14.5 0.000 promoter-TSS (NM_004713) promoter-TSS (NM_004713) -123 NM_004713 9147 Hs.655964 NM_004713 ENSG00000165525 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding chr7-2115 chr7 22895666 22895876 + 14.5 0.000 Intergenic Intergenic 39158 NR_003075 692210 NR_003075 ENSG00000221740 SNORD93 HBII-336 small nucleolar RNA, C/D box 93 snoRNA chr6-5479 chr6 161631043 161631253 + 14.5 0.000 intron (NM_004562, intron 7 of 11) intron (NM_004562, intron 7 of 11) 160171 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr1-3308 chr1 7861033 7861243 + 14.5 0.000 Intergenic L2b|LINE|L2 -7647 NM_021995 10911 Hs.715862 NM_006786 ENSG00000049247 UTS2 PRO1068|U-II|UCN2|UII urotensin 2 protein-coding chr2-3676 chr2 188897257 188897467 + 14.5 0.000 Intergenic Intergenic -77011 NM_000090 1281 Hs.443625 NM_000090 ENSG00000168542 COL3A1 EDS4A|EDSVASC|PMGEDSV collagen type III alpha 1 chain protein-coding chr6-1421 chr6 146599112 146599322 + 14.5 0.000 promoter-TSS (NR_125860) promoter-TSS (NR_125860) 245 NM_024694 79747 Hs.720870 NM_024694 ENSG00000118492 ADGB C6orf103|CAPN16 androglobin protein-coding chr20-1039 chr20 52212018 52212228 + 14.5 0.000 Intergenic HAL1|LINE|L1 -20138 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr1-3879 chr1 52629366 52629576 + 14.5 0.000 Intergenic Intergenic -3697 NR_135156 348378 Hs.424589 NM_001042693 ENSG00000182183 SHISAL2A FAM159A|PRO7171|WWLS2783 shisa like 2A protein-coding chr14-1125 chr14 99587227 99587437 + 14.5 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 16875 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr18-268 chr18 35041158 35041368 + 14.5 0.000 promoter-TSS (NR_046177) promoter-TSS (NR_046177) -150 NM_014268 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr5-1684 chr5 74935096 74935306 + 14.5 0.000 Intergenic Intergenic -68235 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr12-1859 chr12 49568370 49568580 + 14.5 0.000 promoter-TSS (NM_001278341) promoter-TSS (NM_001278341) -330 NM_001278341 10445 Hs.25313 NM_006337 ENSG00000187778 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding chr5-1170 chr5 14268350 14268560 + 14.5 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 125113 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr11-5525 chr11 88807961 88808171 + 14.5 0.000 intron (NM_001143831, intron 2 of 8) intron (NM_001143831, intron 2 of 8) 240006 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr10-869 chr10 11611610 11611820 + 14.5 0.000 promoter-TSS (NR_125732) promoter-TSS (NR_125732) -65 NM_014688 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr8-1784 chr8 89473832 89474042 + 14.5 0.000 Intergenic Intergenic 283774 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr17-1341 chr17 40283888 40284098 + 14.5 0.000 3' UTR (NM_133264, exon 8 of 8) 3' UTR (NM_133264, exon 8 of 8) -3886 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding chr7-3792 chr7 90824945 90825155 + 14.5 0.000 intron (NM_012395, intron 4 of 13) intron (NM_012395, intron 4 of 13) 115234 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr5-1890 chr5 150801191 150801401 + 14.5 0.000 Intergenic Intergenic 23350 NM_032947 85027 Hs.29444 NM_032947 ENSG00000256235 SMIM3 C5orf62|MST150|NID67 small integral membrane protein 3 protein-coding chr7-1035 chr7 76262963 76263173 + 14.5 0.000 intron (NM_001110199, intron 8 of 14) intron (NM_001110199, intron 8 of 14) -39605 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr5-1802 chr5 64680586 64680796 + 14.5 0.000 Intergenic MLT2B1|LTR|ERVL -9812 NM_001164442 100132916 Hs.591776 NM_001164442 ENSG00000145642 SHISAL2B FAM159B shisa like 2B protein-coding chr4-814 chr4 119525476 119525686 + 14.5 0.000 exon (NM_001083, exon 12 of 21) exon (NM_001083, exon 12 of 21) 70798 NR_037630 645513 Hs.677546 NR_037630 ENSG00000245958 LOC645513 - septin 7 pseudogene pseudo chr7-1995 chr7 5667440 5667650 + 14.5 0.000 intron (NR_046834, intron 1 of 2) intron (NR_046834, intron 1 of 2) 12916 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr9-1050 chr9 2621409 2621619 + 14.5 0.000 promoter-TSS (NM_001322226) promoter-TSS (NM_001322226) -273 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr17-1245 chr17 17900841 17901051 + 14.5 0.000 intron (NM_001288787, intron 2 of 13) intron (NM_001288787, intron 2 of 13) -63935 NM_004176 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr12-1534 chr12 85283615 85283825 + 14.5 0.000 exon (NM_006982, exon 2 of 4) exon (NM_006982, exon 2 of 4) 3500 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr8-847 chr8 143245405 143245615 + 14.5 0.000 Intergenic Intergenic -1429 NM_001271156 286128 Hs.668016 NM_173832 ENSG00000181638 ZFP41 ZNF753|zfp-41 ZFP41 zinc finger protein protein-coding chrX-1727 chrX 32934273 32934483 + 14.5 0.000 intron (NM_000109, intron 2 of 78) AluJr4|SINE|Alu 194049 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr2-1801 chr2 37781220 37781430 + 14.5 0.000 Intergenic Intergenic 48386 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr9-3294 chr9 75130715 75130925 + 14.5 0.000 intron (NM_012383, intron 4 of 9) intron (NM_012383, intron 4 of 9) 42306 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr1-1714 chr1 24930259 24930469 + 14.5 0.000 promoter-TSS (NM_004350) promoter-TSS (NM_004350) -88 NM_004350 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr12-1141 chr12 106302556 106302766 + 14.5 0.000 promoter-TSS (NM_001286262) promoter-TSS (NM_001286262) -72 NM_152772 255394 Hs.696047 NM_152772 ENSG00000166046 TCP11L2 - t-complex 11 like 2 protein-coding chr2-3292 chr2 74553051 74553261 + 14.5 0.000 intron (NM_032603, intron 1 of 13) intron (NM_032603, intron 1 of 13) 786 NM_032603 84695 Hs.469045 NM_032603 ENSG00000115318 LOXL3 LOXL lysyl oxidase like 3 protein-coding chr2-3006 chr2 47119201 47119411 + 14.5 0.000 intron (NM_001163561, intron 5 of 6) intron (NM_001163561, intron 5 of 6) 36002 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr17-2638 chr17 7747769 7747979 + 14.5 0.000 intron (NM_020877, intron 12 of 85) intron (NM_020877, intron 12 of 85) -6446 NR_002778 118432 Hs.658086 NR_002778 ENSG00000240480 RPL29P2 RPL29_10_1510 ribosomal protein L29 pseudogene 2 pseudo chr2-5738 chr2 218181029 218181239 + 14.5 0.000 Intergenic LTR8|LTR|ERV1 -14172 NM_000634 3577 Hs.194778 NM_000634 ENSG00000163464 CXCR1 C-C|C-C-CKR-1|CD128|CD181|CDw128a|CKR-1|CMKAR1|IL8R1|IL8RA|IL8RBA C-X-C motif chemokine receptor 1 protein-coding chr2-2948 chr2 17084908 17085118 + 14.5 0.000 Intergenic Intergenic -419179 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr2-3868 chr2 37795888 37796098 + 14.5 0.000 Intergenic Intergenic 33718 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr4-2791 chr4 25621725 25621935 + 14.5 0.000 Intergenic Intergenic -34021 NM_006424 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr3-1274 chr3 196012523 196012733 + 14.5 0.000 Intergenic L1MEf|LINE|L1 -22349 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr1-2993 chr1 202008160 202008370 + 14.5 0.000 intron (NR_146472, intron 1 of 1) intron (NR_146472, intron 1 of 1) 2088 NR_146472 102723465 Hs.661033 NR_146472 ELF3-AS1 SCAT7 ELF3 antisense RNA 1 ncRNA chr20-539 chr20 47205748 47205958 + 14.5 0.000 Intergenic Intergenic 38886 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA chr3-2017 chr3 45992920 45993130 + 14.5 0.000 intron (NM_024513, intron 1 of 17) intron (NM_024513, intron 1 of 17) 2799 NM_024513 79443 Hs.200227 NM_024513 ENSG00000163820 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding chr2-1780 chr2 210171455 210171665 + 14.5 0.000 promoter-TSS (NM_152519) promoter-TSS (NM_152519) -151 NM_152519 151050 Hs.282260 NM_152519 ENSG00000144445 KANSL1L C2orf67|MSL1v2 KAT8 regulatory NSL complex subunit 1 like protein-coding chr4-1010 chr4 3232220 3232430 + 14.5 0.000 intron (NM_002111, intron 60 of 66) intron (NM_002111, intron 60 of 66) -12044 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr9-3288 chr9 71285161 71285371 + 14.5 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) 161705 NM_001366143 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr2-4378 chr2 31759439 31759649 + 14.5 0.000 Intergenic Intergenic 44436 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA chr13-923 chr13 71424483 71424693 + 14.5 0.000 Intergenic L1MA9|LINE|L1 409447 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr9-1602 chr9 120655071 120655281 + 14.5 0.000 intron (NM_001080497, intron 2 of 5) Tigger3b|DNA|TcMar-Tigger 59294 NM_001080497 1955 Hs.744903 NM_001080497 ENSG00000106780 MEGF9 EGFL5 multiple EGF like domains 9 protein-coding chr6-2903 chr6 13795262 13795472 + 14.5 0.000 intron (NM_001031713, intron 6 of 8) intron (NM_001031713, intron 6 of 8) 19193 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr10-2550 chr10 63667070 63667280 + 14.5 0.000 Intergenic MIR1_Amn|SINE|MIR -145285 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr7-1447 chr7 66860334 66860544 + 14.5 0.000 intron (NR_135738, intron 3 of 6) intron (NR_135738, intron 3 of 6) 12989 NR_135738 101929580 Hs.571342 NR_135738 GTF2IP23 - general transcription factor IIi pseudogene 23 pseudo chr6-1863 chr6 52757954 52758164 + 14.5 0.000 intron (NM_000846, intron 1 of 6) intron (NM_000846, intron 1 of 6) 5416 NM_000846 2939 Hs.94107 NM_000846 ENSG00000244067 GSTA2 GST2|GSTA2-2|GTA2|GTH2 glutathione S-transferase alpha 2 protein-coding chr1-2047 chr1 246091394 246091604 + 14.5 0.000 intron (NM_022743, intron 5 of 11) (A)n|Simple_repeat|Simple_repeat 325913 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-2646 chr1 156624322 156624532 + 14.5 0.000 exon (NM_021817, exon 5 of 7) exon (NM_021817, exon 5 of 7) -2499 NR_135113 101928177 Hs.571810 NR_135113 LOC101928177 - uncharacterized LOC101928177 ncRNA chr5-2408 chr5 109062717 109062927 + 14.5 0.000 intron (NR_146155, intron 16 of 19) intron (NR_146155, intron 16 of 19) 138216 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr9-1613 chr9 124507688 124507898 + 14.5 0.000 promoter-TSS (NM_004959) promoter-TSS (NM_004959) -394 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr11-1658 chr11 2272683 2272893 + 14.5 0.000 Intergenic Intergenic -1836 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr11-5567 chr11 102312707 102312917 + 14.5 0.000 Intergenic Intergenic -4672 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr6-1796 chr6 118709121 118709331 + 14.5 0.000 intron (NM_001178035, intron 1 of 13) intron (NM_001178035, intron 1 of 13) 849 NM_001178035 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr16-1663 chr16 59478765 59478975 + 14.5 0.000 Intergenic Intergenic 276321 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr17-2437 chr17 8466567 8466777 + 14.5 0.000 intron (NM_001025579, intron 9 of 9) intron (NM_001025579, intron 9 of 9) 30788 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr18-409 chr18 36079001 36079211 + 14.5 0.000 Intergenic L1PB1|LINE|L1 -11512 NM_001303413 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr11-2089 chr11 102836378 102836588 + 14.5 0.000 non-coding (NR_038390, exon 8 of 8) non-coding (NR_038390, exon 8 of 8) 7126 NM_002422 4314 Hs.375129 NM_002422 ENSG00000149968 MMP3 CHDS6|MMP-3|SL-1|STMY|STMY1|STR1 matrix metallopeptidase 3 protein-coding chr7-2719 chr7 33765230 33765440 + 14.5 0.000 Intergenic MIRb|SINE|MIR -139580 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chrX-583 chrX 100980798 100981008 + 14.5 0.000 intron (NM_001162491, intron 3 of 7) L1MA3|LINE|L1 11195 NR_103709 392509 Hs.147237 NM_001162491 ENSG00000174225 ARL13A ARL13|dJ341D10.2 ADP ribosylation factor like GTPase 13A protein-coding chr12-2240 chr12 65335279 65335489 + 14.5 0.000 intron (NM_001031679, intron 4 of 6) intron (NM_001031679, intron 4 of 6) 56397 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr4-1275 chr4 54961488 54961698 + 14.5 0.000 Intergenic Intergenic 164002 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr4-1919 chr4 55947973 55948183 + 14.5 0.000 promoter-TSS (NM_025009) promoter-TSS (NM_025009) -867 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr12-1724 chr12 28622495 28622705 + 14.5 0.000 Intergenic Intergenic -431862 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr12-1478 chr12 11814472 11814682 + 14.5 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 164723 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr11-1029 chr11 120211083 120211293 + 14.5 0.000 5' UTR (NM_178507, exon 1 of 4) 5' UTR (NM_178507, exon 1 of 4) 156 NM_178507 220323 Hs.445081 NM_178507 ENSG00000184232 OAF NS5ATP13TP2 out at first homolog protein-coding chr2-2324 chr2 121485068 121485278 + 14.5 0.000 intron (NM_015282, intron 8 of 38) intron (NM_015282, intron 8 of 38) -45707 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr8-1184 chr8 41604313 41604523 + 14.5 0.000 intron (NM_178819, intron 2 of 12) intron (NM_178819, intron 2 of 12) 25902 NM_001363197 137964 Hs.355753 NM_178819 ENSG00000158669 GPAT4 1-AGPAT 6|AGPAT6|LPAAT-zeta|LPAATZ|TSARG7 glycerol-3-phosphate acyltransferase 4 protein-coding chr3-1530 chr3 177385809 177386019 + 14.5 0.000 Intergenic Intergenic -56007 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr1-4528 chr1 41957722 41957932 + 14.5 0.000 intron (NR_038261, intron 1 of 3) intron (NR_038261, intron 1 of 3) -38905 NM_001127714 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr2-5181 chr2 32752193 32752403 + 14.5 0.000 intron (NM_017735, intron 12 of 19) ERVL-E-int|LTR|ERVL -73135 NR_027099 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr3-2958 chr3 64460874 64461084 + 14.5 0.000 Intergenic Intergenic -100367 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr7-2307 chr7 98286111 98286321 + 14.5 0.000 intron (NM_001159491, intron 2 of 2) intron (NM_001159491, intron 2 of 2) 4530 NM_001159491 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr11-2254 chr11 110613602 110613812 + 14.5 0.000 intron (NM_020809, intron 7 of 15) intron (NM_020809, intron 7 of 15) 98118 NM_001258415 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr17-1884 chr17 48148443 48148653 + 14.5 0.000 intron (NM_001075099, intron 11 of 12) intron (NM_001075099, intron 11 of 12) 7963 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr2-2438 chr2 54122942 54123152 + 14.5 0.000 promoter-TSS (NM_001320588) promoter-TSS (NM_001320588) -236 NM_001320588 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr1-2906 chr1 11179133 11179343 + 14.5 0.000 intron (NM_004958, intron 28 of 57) MER104|DNA|TcMar-Tc2 -10117 NM_021146 10218 Hs.146559 NM_021146 ENSG00000171819 ANGPTL7 AngX|CDT6|dJ647M16.1 angiopoietin like 7 protein-coding chr19-1351 chr19 45164947 45165157 + 14.5 0.000 intron (NM_001270893, intron 1 of 4) intron (NM_001270893, intron 1 of 4) -4902 NM_198478 284353 Hs.299256 NM_198478 NKPD1 - NTPase KAP family P-loop domain containing 1 protein-coding chr5-4220 chr5 126462125 126462335 + 14.5 0.000 intron (NR_146196, intron 1 of 14) intron (NR_146196, intron 1 of 14) -2920 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr9-1220 chr9 128107038 128107248 + 14.5 0.000 exon (NM_001265614, exon 10 of 11) exon (NM_001265614, exon 10 of 11) 8661 NM_052901 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr14-1374 chr14 27083297 27083507 + 14.5 0.000 Intergenic Intergenic 174760 NR_036193 100423019 NR_036193 ENSG00000265165 MIR4307 - microRNA 4307 ncRNA chr5-1837 chr5 105731159 105731369 + 14.5 0.000 Intergenic Intergenic 631790 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr7-1144 chr7 74580301 74580511 + 14.5 0.000 intron (NM_016328, intron 22 of 26) intron (NM_016328, intron 22 of 26) -15562 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr16-4718 chr16 82412237 82412447 + 14.5 0.000 Intergenic Intergenic -214627 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr17-2022 chr17 16415637 16415847 + 14.5 0.000 5' UTR (NM_016113, exon 1 of 15) 5' UTR (NM_016113, exon 1 of 15) 171 NM_016113 51393 Hs.279746 NM_016113 ENSG00000187688 TRPV2 VRL|VRL-1|VRL1 transient receptor potential cation channel subfamily V member 2 protein-coding chr3-1753 chr3 179175499 179175709 + 14.5 0.000 intron (NM_006218, intron 1 of 20) HAL1|LINE|L1 27247 NM_006218 5290 Hs.553498 NM_006218 ENSG00000121879 PIK3CA CLAPO|CLOVE|CWS5|MCAP|MCM|MCMTC|PI3K|PI3K-alpha|p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha protein-coding chr4-2168 chr4 96807058 96807268 + 14.5 0.000 intron (NR_147149, intron 3 of 3) intron (NR_147149, intron 3 of 3) 496460 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr13-1287 chr13 30408309 30408519 + 14.5 0.000 Intergenic CpG 13830 NR_125771 103724387 NR_125771 ENSG00000225039 LINC01058 - long intergenic non-protein coding RNA 1058 ncRNA chr11-2265 chr11 123122575 123122785 + 14.5 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) -60544 NM_153201 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr3-1755 chr3 180433149 180433359 + 14.5 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 19081 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr20-648 chr20 23755142 23755352 + 14.5 0.000 Intergenic Intergenic -4310 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr8-1368 chr8 126833997 126834207 + 14.5 0.000 Intergenic Intergenic -179052 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr13-271 chr13 45464782 45464992 + 14.5 0.000 promoter-TSS (NM_031431) promoter-TSS (NM_031431) -52 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chr6-1546 chr6 75171863 75172073 + 14.5 0.000 intron (NM_004370, intron 13 of 65) intron (NM_004370, intron 13 of 65) 34085 NM_080645 1303 Hs.101302 NM_004370 ENSG00000111799 COL12A1 BA209D8.1|BTHLM2|COL12A1L|DJ234P15.1|EDSMYP|UCMD2 collagen type XII alpha 1 chain protein-coding chr17-1815 chr17 800715 800925 + 14.5 0.000 3' UTR (NM_022463, exon 8 of 8) 3' UTR (NM_022463, exon 8 of 8) 18467 NM_001317947 55178 Hs.182729 NM_018146 ENSG00000171861 MRM3 RMTL1|RNMTL1 mitochondrial rRNA methyltransferase 3 protein-coding chr10-2757 chr10 122239980 122240190 + 14.5 0.000 intron (NM_206862, intron 18 of 22) MIR|SINE|MIR -31211 NM_001318189 118663 Hs.422466 NM_144587 ENSG00000138152 BTBD16 C10orf87 BTB domain containing 16 protein-coding chr4-1110 chr4 30720749 30720959 + 14.5 0.000 5' UTR (NM_032456, exon 1 of 1) 5' UTR (NM_032456, exon 1 of 1) 485 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr16-786 chr16 64391405 64391615 + 14.5 0.000 Intergenic Intergenic 730553 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr17-2870 chr17 32191300 32191510 + 14.5 0.000 intron (NM_001033566, intron 8 of 19) intron (NM_001033566, intron 8 of 19) -39834 NR_002222 503640 Hs.631752 NR_002222 ARGFXP2 - arginine-fifty homeobox pseudogene 2 pseudo chr7-1776 chr7 74027003 74027213 + 14.5 0.000 promoter-TSS (NM_001278939) promoter-TSS (NM_001278939) -681 NM_001278918 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr19-1729 chr19 53978280 53978490 + 14.5 0.000 intron (NM_031895, intron 2 of 3) CpG -3922 NR_030632 100126325 NR_030632 ENSG00000284583 MIR935 MIRN935|hsa-mir-935|mir-935 microRNA 935 ncRNA chr7-1989 chr7 2359918 2360128 + 14.5 0.000 intron (NM_001037283, intron 1 of 18) intron (NM_001037283, intron 1 of 18) 5196 NM_003751 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr10-1706 chr10 58266978 58267188 + 14.5 0.000 intron (NM_152230, intron 1 of 5) intron (NM_152230, intron 1 of 5) 811 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr16-1307 chr16 87728155 87728365 + 14.5 0.000 intron (NM_001184856, intron 5 of 10) intron (NM_001184856, intron 5 of 10) 37726 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr12-1942 chr12 105922694 105922904 + 14.5 0.000 Intergenic Intergenic 216025 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr13-878 chr13 31023164 31023374 + 14.5 0.000 Intergenic Intergenic 90613 NM_001353388 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr4-990 chr4 139295839 139296049 + 14.5 0.000 5' UTR (NM_001184986, exon 3 of 6) 5' UTR (NM_001184986, exon 3 of 6) 5266 NM_001184991 4717 Hs.84549 NM_002494 ENSG00000109390 NDUFC1 KFYI NADH:ubiquinone oxidoreductase subunit C1 protein-coding chr1-5077 chr1 108852327 108852537 + 14.5 0.000 non-coding (NR_049760, exon 3 of 14) non-coding (NR_049760, exon 3 of 14) 4662 NM_152763 254268 Hs.729441 NM_152763 ENSG00000162641 AKNAD1 C1orf62 AKNA domain containing 1 protein-coding chr7-1500 chr7 149091615 149091825 + 14.5 0.000 Intergenic Intergenic -1002 NM_152411 136051 Hs.729572 NM_152411 ENSG00000197362 ZNF786 - zinc finger protein 786 protein-coding chr9-1943 chr9 33752971 33753181 + 14.5 0.000 intron (NM_001197098, intron 1 of 4) MIR|SINE|MIR 2255 NM_001197098 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr9-6091 chr9 137530616 137530826 + 14.5 0.000 intron (NM_001098537, intron 8 of 34) intron (NM_001098537, intron 8 of 34) 19681 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr17-2671 chr17 34823888 34824098 + 14.5 0.000 Intergenic Intergenic 137467 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr18-235 chr18 63454476 63454686 + 14.5 0.000 Intergenic MER34B|LTR|ERV1 -22377 NM_002639 5268 Hs.55279 NM_002639 ENSG00000206075 SERPINB5 PI5|maspin serpin family B member 5 protein-coding chr20-672 chr20 32342486 32342696 + 14.5 0.000 Intergenic Intergenic -15753 NM_001164603 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chr9-886 chr9 115250705 115250915 + 14.5 0.000 intron (NR_163556, intron 2 of 7) intron (NR_163556, intron 2 of 7) 108992 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr2-886 chr2 46268246 46268456 + 14.5 0.000 Intergenic L1MB3|LINE|L1 -29056 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr4-1127 chr4 153782253 153782463 + 14.5 0.000 intron (NM_003013, intron 2 of 2) intron (NM_003013, intron 2 of 2) 6725 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr4-2442 chr4 155526572 155526782 + 14.5 0.000 Intergenic Intergenic -140033 NM_001130687 2982 Hs.24258 NM_000856 ENSG00000164116 GUCY1A1 GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6 guanylate cyclase 1 soluble subunit alpha 1 protein-coding chr9-1087 chr9 33621210 33621420 + 14.5 0.000 Intergenic Intergenic -2910 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr5-2445 chr5 132419649 132419859 + 14.5 0.000 intron (NR_161242, intron 1 of 3) intron (NR_161242, intron 1 of 3) 8825 NR_161242 441108 Hs.658288 NM_001013717 C5orf56 - chromosome 5 open reading frame 56 ncRNA chr6-1685 chr6 12147895 12148105 + 14.5 0.000 intron (NM_002114, intron 7 of 8) intron (NM_002114, intron 7 of 8) 135688 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr9-1560 chr9 6788222 6788432 + 14.5 0.000 intron (NR_148680, intron 1 of 21) intron (NR_148680, intron 1 of 21) 30977 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr18-899 chr18 55328484 55328694 + 14.5 0.000 intron (NM_001243228, intron 8 of 19) intron (NM_001243228, intron 8 of 19) -6748 NM_001243234 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr4-1125 chr4 139919114 139919324 + 14.5 0.000 intron (NM_018717, intron 1 of 4) Plat_L3|LINE|CR1 -208796 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr17-1399 chr17 44279656 44279866 + 14.5 0.000 Intergenic Intergenic -11626 NM_000342 6521 Hs.210751 NM_000342 ENSG00000004939 SLC4A1 AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR solute carrier family 4 member 1 (Diego blood group) protein-coding chr3-1578 chr3 71542726 71542936 + 14.5 0.000 promoter-TSS (NR_031697) promoter-TSS (NR_031697) 726 NM_001244816 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr22-1048 chr22 41106442 41106652 + 14.5 0.000 intron (NM_001429, intron 1 of 30) intron (NM_001429, intron 1 of 30) 13955 NM_001362843 2033 Hs.517517 NM_001429 ENSG00000100393 EP300 KAT3B|MKHK2|RSTS2|p300 E1A binding protein p300 protein-coding chr2-4836 chr2 69493776 69493986 + 14.5 0.000 intron (NM_014911, intron 17 of 21) L2b|LINE|L2 26290 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr5-797 chr5 38556867 38557077 + 14.5 0.000 promoter-TSS (NM_001127671) promoter-TSS (NM_001127671) 186 NR_103553 100506495 Hs.657602 NR_103553 ENSG00000244968 LIFR-AS1 - LIFR antisense RNA 1 ncRNA chr10-1985 chr10 34916440 34916650 + 14.5 0.000 Intergenic Intergenic 100777 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr6-1447 chr6 161234131 161234341 + 14.5 0.000 intron (NM_020133, intron 1 of 8) intron (NM_020133, intron 1 of 8) 39825 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr13-1106 chr13 113602948 113603158 + 14.5 0.000 intron (NM_007111, intron 2 of 11) MER30|DNA|hAT-Charlie 18300 NM_007111 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr3-2842 chr3 26926370 26926580 + 14.5 0.000 Intergenic Intergenic 231918 NM_001317811 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr14-1170 chr14 54139129 54139339 + 14.5 0.000 Intergenic Intergenic -182343 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr19-1560 chr19 1282751 1282961 + 14.5 0.000 Intergenic Intergenic -3017 NM_001405 1943 NM_001405 ENSG00000099617 EFNA2 ELF-1|EPLG6|HEK7-L|LERK-6|LERK6 ephrin A2 protein-coding chr18-604 chr18 61569578 61569788 + 14.5 0.000 Intergenic Intergenic -178493 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr3-1302 chr3 170751832 170752042 + 14.5 0.000 intron (NR_135556, intron 5 of 5) intron (NR_135556, intron 5 of 5) 118258 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr13-321 chr13 27270606 27270816 + 14.5 0.000 promoter-TSS (NM_001331126) promoter-TSS (NM_001331126) 384 NM_206827 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr19-1223 chr19 10644829 10645039 + 14.5 0.000 TTS (NM_020428) TTS (NM_020428) 8938 NR_024333 147727 Hs.631616 NR_024333 ENSG00000267100 ILF3-DT ILF3-AS1 ILF3 divergent transcript ncRNA chr8-1162 chr8 23291786 23291996 + 14.5 0.000 intron (NR_125897, intron 6 of 8) intron (NR_125897, intron 6 of 8) 3783 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr6-379 chr6 159727474 159727684 + 14.5 0.000 promoter-TSS (NM_001270533) promoter-TSS (NM_001270533) 73 NM_001270533 9589 Hs.446091 NM_004906 ENSG00000146457 WTAP Mum2 WT1 associated protein protein-coding chr9-1627 chr9 133655006 133655216 + 14.5 0.000 non-coding (NR_102735, exon 2 of 2) non-coding (NR_102735, exon 2 of 2) 2297 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr7-1031 chr7 46930374 46930584 + 14.5 0.000 Intergenic Intergenic -233357 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr5-2479 chr5 142315895 142316105 + 14.5 0.000 intron (NM_001127496, intron 1 of 1) intron (NM_001127496, intron 1 of 1) 2322 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr11-2608 chr11 134083497 134083707 + 14.5 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 14530 NM_032801 83700 Hs.150718 NM_032801 ENSG00000166086 JAM3 JAM-2|JAM-3|JAM-C|JAMC junctional adhesion molecule 3 protein-coding chr13-1219 chr13 75175746 75175956 + 14.5 0.000 Intergenic Intergenic 64530 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr6-1255 chr6 25172990 25173200 + 14.5 0.000 Intergenic L2b|LINE|L2 -34703 NR_027626 8418 Hs.484918 NR_002174 ENSG00000168405 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo chr9-1961 chr9 87112838 87113048 + 14.5 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -27718 NR_036691 494127 Hs.626316 NR_036691 LOC494127 - NFYC pseudogene pseudo chr8-1016 chr8 144168452 144168662 + 14.5 0.000 intron (NM_001099281, intron 3 of 11) intron (NM_001099281, intron 3 of 11) 19912 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr8-945 chr8 66560831 66561041 + 14.5 0.000 Intergenic Intergenic 52282 NM_001144755 4603 Hs.445898 NM_001080416 ENSG00000185697 MYBL1 A-MYB|AMYB MYB proto-oncogene like 1 protein-coding chr2-2141 chr2 127448745 127448955 + 14.5 0.000 Intergenic FLAM_C|SINE|Alu -25232 NR_039944 100616187 NR_039944 ENSG00000264075 MIR4783 - microRNA 4783 ncRNA chr20-536 chr20 45345722 45345932 + 14.5 0.000 intron (NM_002999, intron 1 of 4) intron (NM_002999, intron 1 of 4) 2597 NM_002999 6385 Hs.632267 NM_002999 ENSG00000124145 SDC4 SYND4 syndecan 4 protein-coding chr9-4888 chr9 5844271 5844481 + 14.5 0.000 Intergenic AluSz6|SINE|Alu -11259 NM_024896 79956 Hs.591078 NM_024896 ENSG00000099219 ERMP1 FXNA|KIAA1815|bA207C16.3 endoplasmic reticulum metallopeptidase 1 protein-coding chr7-2447 chr7 134787676 134787886 + 14.5 0.000 intron (NM_033157, intron 1 of 14) intron (NM_033157, intron 1 of 14) 8147 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr20-728 chr20 2664056 2664266 + 14.5 0.000 promoter-TSS (NM_001330763) promoter-TSS (NM_001330763) 55 NM_001330763 3420 Hs.436405 NM_006899 ENSG00000101365 IDH3B RP46 isocitrate dehydrogenase (NAD(+)) 3 beta protein-coding chr19-1437 chr19 4732702 4732912 + 14.5 0.000 Intergenic Intergenic -8965 NR_158699 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr11-3118 chr11 35260778 35260988 + 14.5 0.000 3' UTR (NM_004171, exon 11 of 11) 3' UTR (NM_004171, exon 11 of 11) 97933 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr6-950 chr6 166598481 166598691 + 14.5 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 28665 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr7-617 chr7 123748970 123749180 + 14.5 0.000 promoter-TSS (NM_003941) promoter-TSS (NM_003941) -72 NM_003941 8976 Hs.143728 NM_003941 ENSG00000106299 WASL N-WASP|NWASP|WASPB WASP like actin nucleation promoting factor protein-coding chr2-3829 chr2 27146396 27146606 + 14.5 0.000 Intergenic AluSx3|SINE|Alu -2503 NM_175769 150921 Hs.591583 NM_175769 ENSG00000163792 TCF23 OUT|TCF-23|bHLHa24 transcription factor 23 protein-coding chr9-2335 chr9 36207149 36207359 + 14.5 0.000 intron (NM_001184761, intron 4 of 4) intron (NM_001184761, intron 4 of 4) 16333 NM_001076677 1211 Hs.522114 NM_001833 ENSG00000122705 CLTA LCA clathrin light chain A protein-coding chr8-604 chr8 129508567 129508777 + 14.5 0.000 intron (NR_130917, intron 1 of 3) L2b|LINE|L2 -24530 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA chr1-5201 chr1 178098503 178098713 + 14.5 0.000 intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) 4504 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr12-2243 chr12 67077701 67077911 + 14.5 0.000 intron (NR_120490, intron 3 of 3) Kanga1a|DNA|TcMar-Tc2 18478 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr12-1497 chr12 48640742 48640952 + 14.4 0.000 Intergenic Intergenic 13671 NR_002968 677815 Hs.689717 NR_002968 ENSG00000221491 SNORA2C ACA34|MIR1291|SNORA34 small nucleolar RNA, H/ACA box 2C snoRNA chr18-747 chr18 68679748 68679958 + 14.4 0.000 intron (NM_019022, intron 14 of 15) MLT1K|LTR|ERVL-MaLR 35255 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr1-3483 chr1 64303170 64303380 + 14.4 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 99652 NM_001366234 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding chr3-3708 chr3 173746477 173746687 + 14.4 0.000 intron (NM_001365928, intron 3 of 6) L2a|LINE|L2 162148 NM_001365934 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr16-773 chr16 88527479 88527689 + 14.4 0.000 intron (NM_153813, intron 5 of 9) intron (NM_153813, intron 5 of 9) 3469 NR_148997 100128882 Hs.722546 NR_148997 ENSG00000261744 LOC100128882 - uncharacterized LOC100128882 ncRNA chr3-4309 chr3 166832650 166832860 + 14.4 0.000 Intergenic MER41A|LTR|ERV1 -65928 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr21-898 chr21 17393583 17393793 + 14.4 0.000 Intergenic Intergenic -45202 NR_037585 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chr6-1561 chr6 161186230 161186440 + 14.4 0.000 intron (NM_020133, intron 2 of 8) intron (NM_020133, intron 2 of 8) -24353 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr8-562 chr8 80578124 80578334 + 14.4 0.000 Intergenic CpG 92003 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr1-2304 chr1 31701685 31701895 + 14.4 0.000 intron (NM_001856, intron 2 of 70) intron (NM_001856, intron 2 of 70) 2227 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr11-943 chr11 119361367 119361577 + 14.4 0.000 intron (NM_001243759, intron 1 of 11) intron (NM_001243759, intron 1 of 11) 2736 NM_171997 9099 Hs.524085 NM_004205 ENSG00000036672 USP2 UBP41|USP9 ubiquitin specific peptidase 2 protein-coding chr1-3265 chr1 212596291 212596501 + 14.4 0.000 intron (NM_001030287, intron 1 of 3) intron (NM_001030287, intron 1 of 3) -12365 NM_001206484 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chr1-1722 chr1 44239459 44239669 + 14.4 0.000 intron (NR_110056, intron 2 of 3) intron (NR_110056, intron 2 of 3) 4719 NR_110056 100874278 Hs.132497 NR_046817 ENSG00000233602 ERI3-IT1 - ERI3 intronic transcript 1 ncRNA chr10-2494 chr10 33684322 33684532 + 14.4 0.000 Intergenic Intergenic 88253 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr10-1523 chr10 58590142 58590352 + 14.4 0.000 intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 77375 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr9-1457 chr9 2655440 2655650 + 14.4 0.000 3' UTR (NM_001322226, exon 17 of 17) 3' UTR (NM_001322226, exon 17 of 17) -33172 NR_015375 401491 Hs.416043 NR_015375 ENSG00000236404 VLDLR-AS1 linc-VLDLR|lincRNA-VLDLR VLDLR antisense RNA 1 ncRNA chr10-2660 chr10 94299529 94299739 + 14.4 0.000 intron (NM_001165979, intron 23 of 31) intron (NM_001165979, intron 23 of 31) -12564 NR_033969 100128054 Hs.677562 NR_033969 ENSG00000268894 PLCE1-AS1 - PLCE1 antisense RNA 1 ncRNA chr21-545 chr21 42391459 42391669 + 14.4 0.000 intron (NM_032405, intron 2 of 8) LTR40a|LTR|ERVL -2415 NM_032404 64699 Hs.208600 NM_024022 ENSG00000160183 TMPRSS3 DFNB10|DFNB8|ECHOS1|TADG12 transmembrane serine protease 3 protein-coding chr1-4700 chr1 239020310 239020520 + 14.4 0.000 Intergenic Intergenic -366153 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr1-3218 chr1 173332128 173332338 + 14.4 0.000 intron (NR_037845, intron 2 of 2) intron (NR_037845, intron 2 of 2) -124902 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr9-3856 chr9 131036715 131036925 + 14.4 0.000 intron (NM_006059, intron 4 of 27) intron (NM_006059, intron 4 of 27) 27646 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr2-3269 chr2 14524163 14524373 + 14.4 0.000 Intergenic L2c|LINE|L2 -108449 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr1-8863 chr1 3750962 3751172 + 14.4 0.000 Intergenic LTR5B|LTR|ERVK -1383 NM_152492 148870 Hs.348700 NM_152492 ENSG00000162592 CCDC27 - coiled-coil domain containing 27 protein-coding chr2-666 chr2 181891621 181891831 + 14.4 0.000 promoter-TSS (NM_001130445) promoter-TSS (NM_001130445) -4 NM_001287505 6744 Hs.196983 NM_006751 ENSG00000138434 ITPRID2 CS-1|CS1|KRAP|SPAG13|SSFA2 ITPR interacting domain containing 2 protein-coding chrX-929 chrX 24145646 24145856 + 14.4 0.000 TTS (NR_046657) TTS (NR_046657) -3231 NM_001330327 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr6-1457 chr6 5723984 5724194 + 14.4 0.000 intron (NM_006567, intron 6 of 6) intron (NM_006567, intron 6 of 6) -28817 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr8-631 chr8 23161777 23161987 + 14.4 0.000 intron (NM_003840, intron 1 of 8) L1M5|LINE|L1 2145 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chrX-831 chrX 109591436 109591646 + 14.4 0.000 Intergenic Intergenic 33631 NM_012282 23630 Hs.522753 NM_012282 ENSG00000176076 KCNE5 KCNE1L potassium voltage-gated channel subfamily E regulatory subunit 5 protein-coding chr1-2651 chr1 164708041 164708251 + 14.4 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 66495 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr10-2309 chr10 35925541 35925751 + 14.4 0.000 Intergenic Intergenic 147344 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr20-888 chr20 33296094 33296304 + 14.4 0.000 intron (NM_033197, intron 6 of 15) intron (NM_033197, intron 6 of 15) 12985 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chrX-1103 chrX 12432718 12432928 + 14.4 0.000 intron (NM_001368402, intron 2 of 17) SVA_A|Retroposon|SVA -65857 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr9-3734 chr9 116860510 116860720 + 14.4 0.000 intron (NM_014010, intron 10 of 21) intron (NM_014010, intron 10 of 21) 173310 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr11-2202 chr11 47302482 47302692 + 14.4 0.000 intron (NM_130476, intron 22 of 32) L1M2a|LINE|L1 -30477 NR_120569 101928943 Hs.664956 NR_120568 ENSG00000256746 LOC101928943 - uncharacterized LOC101928943 ncRNA chr15-1734 chr15 41564100 41564310 + 14.4 0.000 exon (NM_006293, exon 5 of 19) exon (NM_006293, exon 5 of 19) 4233 NM_001330264 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr22-568 chr22 44309297 44309507 + 14.4 0.000 intron (NM_001099294, intron 1 of 4) intron (NM_001099294, intron 1 of 4) 3549 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr3-1093 chr3 9809674 9809884 + 14.4 0.000 promoter-TSS (NR_037162) promoter-TSS (NR_037162) -136 NM_001025930 26140 Hs.726435 NM_015644 ENSG00000214021 TTLL3 HOTTL tubulin tyrosine ligase like 3 protein-coding chr12-1465 chr12 3632775 3632985 + 14.4 0.000 intron (NM_001144958, intron 15 of 19) intron (NM_001144958, intron 15 of 19) 120229 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr1-3713 chr1 211134195 211134405 + 14.4 0.000 promoter-TSS (NR_046784) promoter-TSS (NR_046784) -152 NM_172362 3756 Hs.553187 NM_002238 ENSG00000143473 KCNH1 EAG|EAG1|Kv10.1|TMBTS|ZLS1|h-eag|hEAG1 potassium voltage-gated channel subfamily H member 1 protein-coding chr9-2273 chr9 120752145 120752355 + 14.4 0.000 Intergenic HAL1M8|LINE|L1 -37780 NM_001080497 1955 Hs.744903 NM_001080497 ENSG00000106780 MEGF9 EGFL5 multiple EGF like domains 9 protein-coding chr17-1262 chr17 42325003 42325213 + 14.4 0.000 intron (NM_001369512, intron 15 of 23) intron (NM_001369512, intron 15 of 23) 37052 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr1-2623 chr1 109198366 109198576 + 14.4 0.000 intron (NM_001284352, intron 16 of 20) intron (NM_001284352, intron 16 of 20) 11922 NM_001284353 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding chr1-3565 chr1 1058916 1059126 + 14.4 0.000 promoter-TSS (NR_148960) promoter-TSS (NR_148960) -713 NR_148960 100288175 Hs.713286 NR_148960 ENSG00000217801 LOC100288175 - uncharacterized LOC100288175 ncRNA chr3-4030 chr3 69199313 69199523 + 14.4 0.000 intron (NM_015123, intron 11 of 22) intron (NM_015123, intron 11 of 22) -76823 NM_198271 56203 Hs.350621 NM_198271 ENSG00000163380 LMOD3 NEM10 leiomodin 3 protein-coding chr7-1774 chr7 72801652 72801862 + 14.4 0.000 intron (NM_001145440, intron 6 of 13) intron (NM_001145440, intron 6 of 13) 26443 NM_001145440 441250 Hs.488614 NM_001145440 ENSG00000277149 TYW1B LINC00069|NCRNA00069|RSAFD2 tRNA-yW synthesizing protein 1 homolog B protein-coding chr14-644 chr14 102063132 102063342 + 14.4 0.000 Intergenic Intergenic 23807 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr1-6678 chr1 51769057 51769267 + 14.4 0.000 intron (NM_148906, intron 11 of 22) Charlie8|DNA|hAT-Charlie 39312 NM_148905 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr14-821 chr14 102805446 102805656 + 14.4 0.000 intron (NM_001199427, intron 1 of 7) intron (NM_001199427, intron 1 of 7) 28072 NM_145726 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr5-1251 chr5 14208248 14208458 + 14.4 0.000 intron (NM_007118, intron 1 of 56) L1ME1|LINE|L1 65011 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr10-1275 chr10 11742428 11742638 + 14.4 0.000 5' UTR (NM_024693, exon 1 of 5) 5' UTR (NM_024693, exon 1 of 5) 151 NM_024693 79746 Hs.22242 NM_024693 ENSG00000134463 ECHDC3 - enoyl-CoA hydratase domain containing 3 protein-coding chr18-2119 chr18 52624350 52624560 + 14.4 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 284258 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr6-1326 chr6 17505199 17505409 + 14.4 0.000 intron (NR_110855, intron 2 of 3) intron (NR_110855, intron 2 of 3) 5961 NR_110855 101928491 Hs.622876 NR_110855 LOC101928491 - uncharacterized LOC101928491 ncRNA chr8-1192 chr8 54563055 54563265 + 14.4 0.000 Intergenic Intergenic -52936 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr3-1693 chr3 30693517 30693727 + 14.4 0.000 3' UTR (NM_003242, exon 7 of 7) 3' UTR (NM_003242, exon 7 of 7) 87021 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr4-1416 chr4 7938497 7938707 + 14.4 0.000 promoter-TSS (NM_203423) promoter-TSS (NM_203423) -399 NM_203423 389199 Hs.375210 NM_203423 LOC389199 - uncharacterized LOC389199 protein-coding chrX-2791 chrX 132781737 132781947 + 14.4 0.000 intron (NM_001077188, intron 3 of 5) THE1D|LTR|ERVL-MaLR 114200 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr3-4183 chr3 127750695 127750905 + 14.4 0.000 intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 72082 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr19-948 chr19 53467514 53467724 + 14.4 0.000 promoter-TSS (NM_001004301) promoter-TSS (NM_001004301) -114 NM_001004301 126017 Hs.710780 NM_001004301 ENSG00000198346 ZNF813 - zinc finger protein 813 protein-coding chr1-2451 chr1 39173574 39173784 + 14.4 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 89512 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr22-1201 chr22 22158740 22158950 + 14.4 0.000 Intergenic Intergenic -85941 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr2-3526 chr2 235956457 235956667 + 14.4 0.000 intron (NM_001037131, intron 12 of 17) intron (NM_001037131, intron 12 of 17) 211824 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr19-3975 chr19 1085764 1085974 + 14.4 0.000 TTS (NM_001316324) TTS (NM_001316324) 9235 NM_001282334 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr3-1987 chr3 153399855 153400065 + 14.4 0.000 intron (NR_146713, intron 5 of 6) L1MCb|LINE|L1 -84535 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr3-2661 chr3 33401928 33402138 + 14.4 0.000 intron (NM_001128160, intron 8 of 14) intron (NM_001128160, intron 8 of 14) 38345 NM_001128160 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr22-2345 chr22 42451161 42451371 + 14.4 0.000 Intergenic Intergenic -13280 NM_001371362 chr2-1673 chr2 97559996 97560206 + 14.4 0.000 intron (NM_025190, intron 8 of 43) intron (NM_025190, intron 8 of 43) 29776 NM_001353337 57730 Hs.532921 NM_020970 ENSG00000196912 ANKRD36B KIAA1641 ankyrin repeat domain 36B protein-coding chr3-3029 chr3 114418760 114418970 + 14.4 0.000 intron (NM_001348805, intron 7 of 10) intron (NM_001348805, intron 7 of 10) -34728 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr3-2928 chr3 53624066 53624276 + 14.4 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 129560 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr2-3232 chr2 232481395 232481605 + 14.4 0.000 intron (NM_004826, intron 14 of 17) intron (NM_004826, intron 14 of 17) 6334 NM_004826 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr1-3836 chr1 26853105 26853315 + 14.4 0.000 intron (NM_032283, intron 7 of 7) intron (NM_032283, intron 7 of 7) -9939 NM_006142 2810 Hs.523718 NM_006142 ENSG00000175793 SFN YWHAS stratifin protein-coding chr4-2858 chr4 69397902 69398112 + 14.4 0.000 Intergenic L1PA13|LINE|L1 97898 NM_001297615 7363 Hs.285887 NM_021139 ENSG00000156096 UGT2B4 HLUG25|UDPGT2B4|UDPGTH1|UDPGTh-1|UGT2B11 UDP glucuronosyltransferase family 2 member B4 protein-coding chr5-566 chr5 72816359 72816569 + 14.4 0.000 promoter-TSS (NM_001364295) promoter-TSS (NM_001364295) -127 NM_002270 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chr10-1192 chr10 96832295 96832505 + 14.4 0.000 promoter-TSS (NR_135921) promoter-TSS (NR_135921) 58 NR_135921 102723665 Hs.745068 NR_135921 LOC102723665 - uncharacterized LOC102723665 ncRNA chr5-2039 chr5 94437497 94437707 + 14.4 0.000 intron (NM_001145678, intron 14 of 20) intron (NM_001145678, intron 14 of 20) 181002 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr16-689 chr16 66948405 66948615 + 14.4 0.000 Intergenic CpG -12756 NM_024922 23491 Hs.268700 NM_012122 ENSG00000172828 CES3 ES31 carboxylesterase 3 protein-coding chr3-1881 chr3 129794115 129794325 + 14.4 0.000 intron (NM_001349271, intron 2 of 4) intron (NM_001349271, intron 2 of 4) 392 NM_001349273 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr7-2755 chr7 47620105 47620315 + 14.4 0.000 Intergenic Intergenic -1729 NR_108090 101929086 Hs.563487 NR_108090 ENSG00000236078 LINC01447 - long intergenic non-protein coding RNA 1447 ncRNA chr2-3047 chr2 85405539 85405749 + 14.4 0.000 intron (NM_001256139, intron 1 of 9) intron (NM_001256139, intron 1 of 9) 4188 NM_001320732 822 Hs.516155 NM_001747 ENSG00000042493 CAPG AFCP|HEL-S-66|MCP capping actin protein, gelsolin like protein-coding chr12-1168 chr12 30996576 30996786 + 14.4 0.000 TTS (NM_001080509) TTS (NM_001080509) 69777 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr19-1692 chr19 13721396 13721606 + 14.4 0.000 Intergenic Intergenic -10251 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr15-1143 chr15 59200160 59200370 + 14.4 0.000 intron (NM_004998, intron 16 of 27) intron (NM_004998, intron 16 of 27) -6578 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr11-1747 chr11 122883153 122883363 + 14.4 0.000 5' UTR (NM_001363089, exon 1 of 9) 5' UTR (NM_001363089, exon 1 of 9) 328 NM_001363089 79864 Hs.164705 NM_024806 ENSG00000109944 JHY C11orf63 junctional cadherin complex regulator protein-coding chr9-1751 chr9 129761557 129761767 + 14.4 0.000 Intergenic Intergenic -8620 NM_004878 9536 Hs.146688 NM_004878 ENSG00000148344 PTGES MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1 prostaglandin E synthase protein-coding chr5-2360 chr5 79229435 79229645 + 14.4 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -6591 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr1-7184 chr1 211581646 211581856 + 14.4 0.000 Intergenic Intergenic -2590 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr5-1486 chr5 111075534 111075744 + 14.4 0.000 intron (NR_045089, intron 4 of 4) intron (NR_045089, intron 4 of 4) 2265 NM_138551 85480 Hs.389874 NM_033035 ENSG00000145777 TSLP - thymic stromal lymphopoietin protein-coding chr13-737 chr13 102826139 102826349 + 14.4 0.000 intron (NM_001159596, intron 5 of 8) intron (NM_001159596, intron 5 of 8) 19098 NM_001204425 100533467 Hs.258429 NM_001204425 ENSG00000134899 BIVM-ERCC5 ERCC5-202 BIVM-ERCC5 readthrough protein-coding chr4-1844 chr4 136985761 136985971 + 14.4 0.000 intron (NR_149105, intron 2 of 3) intron (NR_149105, intron 2 of 3) -207890 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr10-1342 chr10 103605799 103606009 + 14.4 0.000 exon (NM_014631, exon 13 of 14) exon (NM_014631, exon 13 of 14) 72311 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-3042 chr2 75199524 75199734 + 14.4 0.000 promoter-TSS (NM_001058) promoter-TSS (NM_001058) -109 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr7-2882 chr7 127447416 127447626 + 14.4 0.000 Intergenic L1PA15-16|LINE|L1 -29362 NR_110024 100506682 Hs.148450 NR_110024 ENSG00000226770 LOC100506682 - uncharacterized LOC100506682 ncRNA chr16-1555 chr16 81534045 81534255 + 14.4 0.000 TTS (NR_107008) TTS (NR_107008) 248 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr7-1597 chr7 147406621 147406831 + 14.4 0.000 intron (NM_014141, intron 9 of 22) intron (NM_014141, intron 9 of 22) -28605 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr1-3793 chr1 10684831 10685041 + 14.4 0.000 intron (NM_001079843, intron 4 of 20) intron (NM_001079843, intron 4 of 20) 111710 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chrX-2738 chrX 126536156 126536366 + 14.4 0.000 Intergenic Intergenic 16553 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr19-1169 chr19 5186181 5186391 + 14.4 0.000 Intergenic L1MD2|LINE|L1 154526 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr17-2188 chr17 69733753 69733963 + 14.4 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 139871 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr4-2182 chr4 109662263 109662473 + 14.4 0.000 intron (NM_017918, intron 3 of 7) intron (NM_017918, intron 3 of 7) 41077 NR_133012 839 Hs.654616 NM_001226 ENSG00000138794 CASP6 MCH2 caspase 6 protein-coding chr13-1133 chr13 27611912 27612122 + 14.4 0.000 intron (NM_153371, intron 1 of 9) L2|LINE|L2 8512 NM_153371 222484 Hs.132359 NM_153371 ENSG00000139517 LNX2 PDZRN1 ligand of numb-protein X 2 protein-coding chr21-558 chr21 43983107 43983317 + 14.4 0.000 3' UTR (NM_020132, exon 10 of 10) 3' UTR (NM_020132, exon 10 of 10) -29097 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr19-1712 chr19 40404125 40404335 + 14.4 0.000 intron (NM_020956, intron 4 of 5) CpG 9134 NM_020956 57716 Hs.205457 NM_020956 ENSG00000105227 PRX CMT4F periaxin protein-coding chr6-823 chr6 130396806 130397016 + 14.4 0.000 intron (NM_001258277, intron 2 of 2) L1ME3Cz|LINE|L1 -24185 NM_001258278 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr2-2892 chr2 217909973 217910183 + 14.4 0.000 intron (NM_001308023, intron 1 of 29) intron (NM_001308023, intron 1 of 29) -9450 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr14-1655 chr14 23399158 23399368 + 14.4 0.000 intron (NM_002471, intron 14 of 38) intron (NM_002471, intron 14 of 38) 9014 NM_002471 4624 Hs.278432 NM_002471 ENSG00000197616 MYH6 ASD3|CMD1EE|CMH14|MYHC|MYHCA|SSS3|alpha-MHC myosin heavy chain 6 protein-coding chr3-1891 chr3 146165529 146165739 + 14.4 0.000 Intergenic Intergenic -4139 NM_000935 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr14-1279 chr14 81172426 81172636 + 14.4 0.000 Intergenic Intergenic 30303 NR_003021 677845 Hs.693251 NR_003021 ENSG00000221303 SNORA79 ACA65|SNORA79A small nucleolar RNA, H/ACA box 79 snoRNA chr5-2338 chr5 68027691 68027901 + 14.4 0.000 Intergenic Intergenic -162080 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr7-1926 chr7 23430562 23430772 + 14.4 0.000 intron (NM_006547, intron 2 of 14) intron (NM_006547, intron 2 of 14) 34221 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA chr5-1538 chr5 173829825 173830035 + 14.4 0.000 Intergenic Intergenic -38988 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr6-813 chr6 56844079 56844289 + 14.4 0.000 promoter-TSS (NM_183380) promoter-TSS (NM_183380) 198 NR_125866 101930010 Hs.650232 NR_125866 LOC101930010 - uncharacterized LOC101930010 ncRNA chr8-3672 chr8 15352147 15352357 + 14.4 0.000 Intergenic AluSp|SINE|Alu -113821 NM_139167 137868 Hs.545526 NM_139167 ENSG00000185053 SGCZ ZSG1 sarcoglycan zeta protein-coding chr3-2306 chr3 120451452 120451662 + 14.4 0.000 promoter-TSS (NM_007085) promoter-TSS (NM_007085) -565 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr13-719 chr13 74443845 74444055 + 14.4 0.000 Intergenic Intergenic 24777 NR_047005 100874151 Hs.564552 NR_047005 ENSG00000226240 LINC00381 - long intergenic non-protein coding RNA 381 ncRNA chr1-2362 chr1 52265037 52265247 + 14.4 0.000 intron (NM_007324, intron 5 of 17) intron (NM_007324, intron 5 of 17) 101063 NM_001330585 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr21-376 chr21 26153937 26154147 + 14.4 0.000 intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) -13652 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr7-2766 chr7 55638370 55638580 + 14.4 0.000 Intergenic Intergenic 49557 NR_027340 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr1-5049 chr1 92599259 92599469 + 14.4 0.000 intron (NM_001350198, intron 18 of 19) intron (NM_001350198, intron 18 of 19) -112439 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr20-1222 chr20 23778687 23778897 + 14.4 0.000 Intergenic AluJr4|SINE|Alu -27855 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr5-1375 chr5 82952581 82952791 + 14.4 0.000 Intergenic Intergenic -92850 NR_105016 102546175 NR_105016 ENSG00000281327 LINC01338 - long intergenic non-protein coding RNA 1338 ncRNA chr12-1201 chr12 112551726 112551936 + 14.4 0.000 Intergenic Intergenic -23405 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr2-607 chr2 95121825 95122035 + 14.4 0.000 promoter-TSS (NM_001321995) promoter-TSS (NM_001321995) 97 NR_136153 64969 Hs.655259 NM_031902 ENSG00000144029 MRPS5 MRP-S5|S5mt mitochondrial ribosomal protein S5 protein-coding chr18-426 chr18 2875451 2875661 + 14.4 0.000 intron (NM_032048, intron 2 of 7) intron (NM_032048, intron 2 of 7) 28550 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr10-2802 chr10 133537645 133537855 + 14.4 0.000 intron (NM_000773, intron 7 of 8) intron (NM_000773, intron 7 of 8) 10387 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr17-3711 chr17 17947381 17947591 + 14.4 0.000 intron (NM_001288787, intron 1 of 13) MLT1B|LTR|ERVL-MaLR 24914 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr13-1634 chr13 55021751 55021961 + 14.4 0.000 Intergenic Intergenic -152598 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr1-2381 chr1 113759838 113760048 + 14.4 0.000 promoter-TSS (NM_001323041) promoter-TSS (NM_001323041) -55 NM_001323042 10745 Hs.655824 NM_006608 ENSG00000116793 PHTF1 PHTF putative homeodomain transcription factor 1 protein-coding chr11-2779 chr11 73101234 73101444 + 14.4 0.000 intron (NM_014824, intron 2 of 19) intron (NM_014824, intron 2 of 19) 40979 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr13-1100 chr13 106156625 106156835 + 14.4 0.000 Intergenic Intergenic -219834 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr5-1221 chr5 133240637 133240847 + 14.4 0.000 intron (NM_015082, intron 7 of 15) intron (NM_015082, intron 7 of 15) 186964 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr10-1125 chr10 132272469 132272679 + 14.4 0.000 intron (NM_001318878, intron 1 of 11) L2a|LINE|L2 -23466 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr1-5722 chr1 84442276 84442486 + 14.4 0.000 Intergenic Intergenic 34030 NM_058248 58511 Hs.129142 NM_021233 ENSG00000137976 DNASE2B DLAD deoxyribonuclease 2 beta protein-coding chr16-3254 chr16 87707676 87707886 + 14.4 0.000 TTS (NR_147833) TTS (NR_147833) 58205 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr9-5246 chr9 78154035 78154245 + 14.4 0.000 Intergenic L1PREC2|LINE|L1 -81935 NM_001330694 84131 Hs.187621 NM_032171 ENSG00000148019 CEP78 C9orf81|CRDHL|IP63 centrosomal protein 78 protein-coding chr10-1184 chr10 84361093 84361303 + 14.4 0.000 intron (NM_018999, intron 1 of 10) L1MCc|LINE|L1 32609 NM_001284240 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr10-1330 chr10 97017014 97017224 + 14.4 0.000 intron (NM_003061, intron 28 of 36) intron (NM_003061, intron 28 of 36) -85637 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr19-1836 chr19 6516320 6516530 + 14.4 0.000 Intergenic CpG -13577 NM_001289127 10382 Hs.110837 NM_006087 ENSG00000104833 TUBB4A DYT4|TUBB4|beta-5 tubulin beta 4A class IVa protein-coding chr9-2802 chr9 121026434 121026644 + 14.4 0.000 intron (NM_001735, intron 8 of 40) MER20|DNA|hAT-Charlie 23736 NM_001317164 727 Hs.494997 NM_001735 ENSG00000106804 C5 C5D|C5a|C5b|CPAMD4|ECLZB complement C5 protein-coding chr14-1198 chr14 71488788 71488998 + 14.4 0.000 non-coding (NR_027046, exon 1 of 1) non-coding (NR_027046, exon 1 of 1) 1032 NR_027046 145474 Hs.658241 NR_027046 LOC145474 - uncharacterized LOC145474 ncRNA chr20-1572 chr20 2616725 2616935 + 14.4 0.000 intron (NM_080751, intron 15 of 19) intron (NM_080751, intron 15 of 19) -35802 NR_027700 10528 Hs.376064 NM_006392 ENSG00000101361 NOP56 NOL5A|SCA36 NOP56 ribonucleoprotein protein-coding chr11-1399 chr11 8756326 8756536 + 14.4 0.000 intron (NM_005418, intron 4 of 22) intron (NM_005418, intron 4 of 22) -12347 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr16-3267 chr16 88479360 88479570 + 14.4 0.000 intron (NM_153813, intron 1 of 9) intron (NM_153813, intron 1 of 9) 10547 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr12-2577 chr12 114202373 114202583 + 14.4 0.000 Intergenic Intergenic 39292 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr9-2045 chr9 4929991 4930201 + 14.4 0.000 Intergenic Intergenic -54990 NM_001322195 3717 Hs.656213 NM_004972 ENSG00000096968 JAK2 JTK10|THCYT3 Janus kinase 2 protein-coding chr5-1366 chr5 61303301 61303511 + 14.4 0.000 Intergenic Intergenic -28852 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr10-2085 chr10 111944587 111944797 + 14.4 0.000 Intergenic L1PA10|LINE|L1 239073 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr3-1345 chr3 129230796 129231006 + 14.4 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -18705 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding chr6-700 chr6 43021403 43021613 + 14.4 0.000 promoter-TSS (NM_033112) promoter-TSS (NM_033112) -94 NM_001329704 88745 Hs.309231 NM_033112 ENSG00000124541 RRP36 C6orf153|dJ20C7.4 ribosomal RNA processing 36 protein-coding chr3-2996 chr3 99910238 99910448 + 14.4 0.000 intron (NM_001042459, intron 4 of 4) intron (NM_001042459, intron 4 of 4) -34140 NM_001282794 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr3-6396 chr3 98001939 98002149 + 14.4 0.000 intron (NM_001105580, intron 7 of 9) intron (NM_001105580, intron 7 of 9) -29593 NM_001261829 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr21-183 chr21 35905460 35905670 + 14.4 0.000 Intergenic Intergenic 19120 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr8-1213 chr8 97944038 97944248 + 14.4 0.000 intron (NM_002380, intron 4 of 18) intron (NM_002380, intron 4 of 18) 75079 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr10-3712 chr10 111448917 111449127 + 14.4 0.000 Intergenic Intergenic 334731 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr10-4418 chr10 64001925 64002135 + 14.4 0.000 Intergenic L1PA13|LINE|L1 -480140 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr2-3050 chr2 85796838 85797048 + 14.4 0.000 Intergenic Intergenic -13266 NR_106719 102466516 NR_106719 ENSG00000278783 MIR6071 hsa-mir-6071 microRNA 6071 ncRNA chr4-2061 chr4 13919260 13919470 + 14.4 0.000 intron (NR_121681, intron 3 of 3) MIRc|SINE|MIR -192603 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr9-3133 chr9 94649079 94649289 + 14.4 0.000 Intergenic Intergenic -8935 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr3-1244 chr3 139772646 139772856 + 14.4 0.000 Intergenic Intergenic -94701 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr6-1680 chr6 9875647 9875857 + 14.4 0.000 Intergenic Intergenic -528750 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr1-8729 chr1 233909648 233909858 + 14.4 0.000 intron (NM_173508, intron 2 of 7) MER20|DNA|hAT-Charlie 5077 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr2-3058 chr2 96135047 96135257 + 14.4 0.000 intron (NM_001002036, intron 3 of 8) intron (NM_001002036, intron 3 of 8) 3284 NM_001002036 431705 Hs.447993 NM_001002036 ENSG00000188886 ASTL SAS1B astacin like metalloendopeptidase protein-coding chr17-1290 chr17 21973038 21973248 + 14.4 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -229852 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr3-2606 chr3 162295435 162295645 + 14.4 0.000 Intergenic Intergenic 798732 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr17-2121 chr17 15348193 15348403 + 14.4 0.000 Intergenic MIRc|SINE|MIR -6701 NM_031898 64518 Hs.414648 NM_031898 ENSG00000125409 TEKT3 - tektin 3 protein-coding chr3-2399 chr3 187994694 187994904 + 14.4 0.000 Intergenic Intergenic -18392 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr14-920 chr14 92625275 92625485 + 14.4 0.000 intron (NM_024832, intron 4 of 9) HERVIP10B3-int|LTR|ERV1 49146 NM_001319987 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr6-992 chr6 3849076 3849286 + 14.4 0.000 promoter-TSS (NM_012135) promoter-TSS (NM_012135) -192 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr16-2364 chr16 57187517 57187727 + 14.4 0.000 intron (NM_001305163, intron 1 of 14) MIRc|SINE|MIR 1293 NM_133368 89970 Hs.460885 NM_133368 ENSG00000159579 RSPRY1 SEMDFA ring finger and SPRY domain containing 1 protein-coding chr14-1601 chr14 96589286 96589496 + 14.4 0.000 Intergenic Intergenic 86526 NM_001293628 10914 Hs.253726 NM_032632 ENSG00000090060 PAPOLA PAP|PAP-alpha poly(A) polymerase alpha protein-coding chr7-5478 chr7 41817370 41817580 + 14.4 0.000 Intergenic MER77B|LTR|ERVL -114385 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr10-1616 chr10 68135444 68135654 + 14.4 0.000 intron (NM_001256268, intron 4 of 23) intron (NM_001256268, intron 4 of 23) 26061 NR_045663 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr11-4165 chr11 49074730 49074940 + 14.4 0.000 Intergenic Intergenic -15723 NM_001206631 646754 Hs.740240 NM_001206631 ENSG00000214891 TRIM64C - tripartite motif containing 64C protein-coding chr11-2013 chr11 61628309 61628519 + 14.4 0.000 intron (NR_002775, intron 2 of 4) intron (NR_002775, intron 2 of 4) 13378 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr11-6615 chr11 73800365 73800575 + 14.4 0.000 intron (NR_134660, intron 2 of 7) intron (NR_134660, intron 2 of 7) 12596 NM_001318498 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr4-1253 chr4 8403247 8403457 + 14.4 0.000 intron (NM_003501, intron 7 of 17) intron (NM_003501, intron 7 of 17) 37371 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr1-8603 chr1 186014437 186014647 + 14.4 0.000 intron (NM_031935, intron 30 of 106) intron (NM_031935, intron 30 of 106) 280151 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr3-1819 chr3 50424739 50424949 + 14.4 0.000 intron (NM_001291101, intron 3 of 37) intron (NM_001291101, intron 3 of 37) 59481 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr22-807 chr22 35974019 35974229 + 14.4 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) -12494 NM_001349992 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr11-2029 chr11 64977606 64977816 + 14.4 0.000 Intergenic Intergenic -5603 NM_001037225 283129 Hs.567793 NM_001037225 ENSG00000168070 MAJIN C11orf85 membrane anchored junction protein protein-coding chr9-4529 chr9 73588866 73589076 + 14.4 0.000 Intergenic Intergenic 437106 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr1-3270 chr1 220680107 220680317 + 14.4 0.000 Intergenic Intergenic -10151 NM_024709 79762 Hs.519839 NM_024709 ENSG00000162817 C1orf115 - chromosome 1 open reading frame 115 protein-coding chr19-2071 chr19 18260126 18260336 + 14.4 0.000 intron (NM_001145305, intron 3 of 3) intron (NM_001145305, intron 3 of 3) -4812 NR_036575 729966 Hs.710873 NR_036575 ENSG00000284797 LOC729966 - uncharacterized LOC729966 ncRNA chr12-2489 chr12 75792721 75792931 + 14.4 0.000 Intergenic L1ME1|LINE|L1 238950 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr8-1979 chr8 77545055 77545265 + 14.4 0.000 Intergenic L1PA16|LINE|L1 94463 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr3-1334 chr3 107240726 107240936 + 14.4 0.000 promoter-TSS (NR_028303) promoter-TSS (NR_028303) 139 NR_028302 344595 Hs.543039 NR_028301 ENSG00000243701 DUBR DUM|LINC00883|LINC0883 DPPA2 upstream binding RNA ncRNA chr19-1338 chr19 12757690 12757900 + 14.4 0.000 exon (NM_017682, exon 10 of 10) exon (NM_017682, exon 10 of 10) 6004 NM_017682 54831 Hs.435611 NM_017682 ENSG00000039987 BEST2 VMD2L1 bestrophin 2 protein-coding chr7-3554 chr7 15780259 15780469 + 14.4 0.000 Intergenic AluJo|SINE|Alu 91986 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr11-2138 chr11 35180893 35181103 + 14.4 0.000 intron (NM_001001389, intron 3 of 16) L2a|LINE|L2 18048 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr5-5263 chr5 121416097 121416307 + 14.4 0.000 Intergenic LTR40b|LTR|ERVL 93652 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr21-209 chr21 44958830 44959040 + 14.4 0.000 intron (NM_001316986, intron 2 of 4) intron (NM_001316986, intron 2 of 4) 18906 NM_058190 85395 Hs.410830 NM_058190 ENSG00000160256 FAM207A C21orf70|PRED56 family with sequence similarity 207 member A protein-coding chr11-3632 chr11 75758305 75758515 + 14.4 0.000 TTS (NR_046090) TTS (NR_046090) 10237 NR_046090 283214 Hs.591972 NR_046090 ENSG00000247867 LOC283214 - uncharacterized LOC283214 ncRNA chr7-2862 chr7 112750843 112751053 + 14.4 0.000 Intergenic L1PA15|LINE|L1 39445 NM_022484 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding chr10-2122 chr10 132731252 132731462 + 14.4 0.000 intron (NM_005539, intron 9 of 15) intron (NM_005539, intron 9 of 15) 50082 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr1-2673 chr1 197787146 197787356 + 14.4 0.000 Intergenic Intergenic -11771 NM_144977 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr20-584 chr20 6534040 6534250 + 14.4 0.000 Intergenic Intergenic 107413 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr7-3422 chr7 147812662 147812872 + 14.4 0.000 intron (NM_014141, intron 12 of 22) intron (NM_014141, intron 12 of 22) 141088 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr12-1330 chr12 80195221 80195431 + 14.4 0.000 intron (NM_001368062, intron 6 of 62) intron (NM_001368062, intron 6 of 62) -14127 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr3-2530 chr3 39261041 39261251 + 14.4 0.000 Intergenic Intergenic 18890 NM_001337 1524 Hs.78913 NM_001337 ENSG00000168329 CX3CR1 CCRL1|CMKBRL1|CMKDR1|GPR13|GPRV28|V28 C-X3-C motif chemokine receptor 1 protein-coding chr9-1405 chr9 113621426 113621636 + 14.4 0.000 Intergenic Intergenic 27402 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr10-649 chr10 62268682 62268892 + 14.4 0.000 promoter-TSS (NM_145307) promoter-TSS (NM_145307) 57 NM_001282941 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding chr1-1966 chr1 161530775 161530985 + 14.4 0.000 Intergenic CpG 6340 NM_002155 3310 Hs.654614 NM_002155 ENSG00000173110 HSPA6 HSP70B' heat shock protein family A (Hsp70) member 6 protein-coding chr17-1419 chr17 81405424 81405634 + 14.4 0.000 intron (NM_001291324, intron 1 of 27) intron (NM_001291324, intron 1 of 27) -4751 NR_039894 100616294 NR_039894 ENSG00000266392 MIR4740 - microRNA 4740 ncRNA chr16-1153 chr16 30740458 30740668 + 14.4 0.000 promoter-TSS (NM_001256829) promoter-TSS (NM_001256829) -79 NM_001256829 100862671 Hs.667372 NM_001256829 ENSG00000281991 TMEM265 IFITMD8 transmembrane protein 265 protein-coding chr4-2132 chr4 76046200 76046410 + 14.4 0.000 intron (NM_001130017, intron 1 of 9) HERV9NC-int|LTR|ERV1 -10235 NM_005409 6373 Hs.632592 NM_005409 ENSG00000169248 CXCL11 H174|I-TAC|IP-9|IP9|SCYB11|SCYB9B|b-R1 C-X-C motif chemokine ligand 11 protein-coding chr21-330 chr21 43765159 43765369 + 14.4 0.000 Intergenic AluJr|SINE|Alu 11111 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr9-1109 chr9 136551425 136551635 + 14.4 0.000 Intergenic Intergenic 3688 NR_121577 101928483 Hs.170035 NR_121577 NALT1 LINC01573|MIR4674HG|NALT|TCONS_l2_00029132 NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 ncRNA chr2-3461 chr2 135664575 135664785 + 14.4 0.000 promoter-TSS (NR_029672) promoter-TSS (NR_029672) -717 NR_029672 406915 NR_029672 ENSG00000207654 MIR128-1 MIR128A|MIRN128-1|MIRN128A|mir-128-1 microRNA 128-1 ncRNA chr1-3860 chr1 40162745 40162955 + 14.4 0.000 intron (NM_012421, intron 1 of 7) intron (NM_012421, intron 1 of 7) 1463 NM_012421 6018 Hs.205627 NM_012421 ENSG00000117000 RLF ZN-15L|ZNF292L rearranged L-myc fusion protein-coding chr12-2468 chr12 60106302 60106512 + 14.4 0.000 Intergenic Intergenic 417037 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr7-1322 chr7 156951563 156951773 + 14.4 0.000 intron (NM_138400, intron 1 of 10) intron (NM_138400, intron 1 of 10) 1956 NM_001353366 64434 Hs.15825 NM_138400 ENSG00000146909 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding chr9-2205 chr9 135356813 135357023 + 14.4 0.000 Intergenic LTR16A|LTR|ERVL 13669 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr1-6756 chr1 69911218 69911428 + 14.4 0.000 intron (NM_001370785, intron 7 of 26) L1PA4|LINE|L1 -7999 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chrX-1132 chrX 29652722 29652932 + 14.4 0.000 intron (NM_014271, intron 5 of 10) MLT1H|LTR|ERVL-MaLR 78549 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr14-579 chr14 103696704 103696914 + 14.4 0.000 TTS (NM_001100118) TTS (NM_001100118) 18642 NM_001371232 chr9-1420 chr9 128245821 128246031 + 14.4 0.000 promoter-TSS (NR_036110) promoter-TSS (NR_036110) -896 NR_036110 100422893 NR_036110 ENSG00000264823 MIR3154 mir-3154 microRNA 3154 ncRNA chr1-5107 chr1 145721407 145721617 + 14.4 0.000 intron (NM_007053, intron 1 of 5) intron (NM_007053, intron 1 of 5) 2013 NR_103845 11126 Hs.488237 NM_007053 ENSG00000117281 CD160 BY55|NK1|NK28 CD160 molecule protein-coding chr5-3037 chr5 16826919 16827129 + 14.4 0.000 intron (NM_012334, intron 2 of 40) intron (NM_012334, intron 2 of 40) 109264 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr11-3151 chr11 58027406 58027616 + 14.4 0.000 intron (NM_001005212, intron 1 of 2) MER58C|DNA|hAT-Charlie -3442 NM_001005186 219952 Hs.690432 NM_001005186 ENSG00000279051 OR6Q1 OR11-226 olfactory receptor family 6 subfamily Q member 1 (gene/pseudogene) protein-coding chr11-952 chr11 44310103 44310313 + 14.4 0.000 promoter-TSS (NM_021926) promoter-TSS (NM_021926) -69 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr17-1768 chr17 32275220 32275430 + 14.4 0.000 intron (NM_001363836, intron 2 of 8) intron (NM_001363836, intron 2 of 8) 9149 NM_001363834 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr3-1711 chr3 53110252 53110462 + 14.4 0.000 intron (NM_052859, intron 7 of 12) L2c|LINE|L2 20078 NM_052859 91869 Hs.631910 NM_052859 ENSG00000163933 RFT1 CDG1N RFT1 homolog protein-coding chr3-3523 chr3 31550752 31550962 + 14.4 0.000 intron (NM_178862, intron 1 of 15) intron (NM_178862, intron 1 of 15) 17932 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr3-1414 chr3 158168047 158168257 + 14.4 0.000 intron (NM_001271834, intron 3 of 8) MER58A|DNA|hAT-Charlie 58063 NM_001271838 51319 Hs.591283 NM_016625 ENSG00000174891 RSRC1 BM-011|MRT70|SFRS21|SRrp53 arginine and serine rich coiled-coil 1 protein-coding chr19-931 chr19 12965188 12965398 + 14.4 0.000 Intergenic L2|LINE|L2 -4325 NM_152654 199699 Hs.331981 NM_152654 ENSG00000179284 DAND5 CER2|CERL2|CKTSF1B3|COCO|CRL2|DANTE|GREM3|SP1 DAN domain BMP antagonist family member 5 protein-coding chr5-1414 chr5 172902760 172902970 + 14.4 0.000 intron (NM_001031711, intron 3 of 9) intron (NM_001031711, intron 3 of 9) -12218 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr1-3873 chr1 50603820 50604030 + 14.4 0.000 intron (NM_007051, intron 8 of 18) intron (NM_007051, intron 8 of 18) -180482 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr1-2989 chr1 190205776 190205986 + 14.4 0.000 intron (NM_199051, intron 6 of 7) intron (NM_199051, intron 6 of 7) 270129 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr8-2036 chr8 107499293 107499503 + 14.4 0.000 Intergenic Intergenic -1480 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr17-1490 chr17 8384751 8384961 + 14.4 0.000 Intergenic Intergenic -1663 NM_001315531 6154 Hs.482144 NM_000987 ENSG00000161970 RPL26 DBA11|L26 ribosomal protein L26 protein-coding chr10-1165 chr10 17388433 17388643 + 14.4 0.000 intron (NR_034129, intron 1 of 2) GA-rich|Low_complexity|Low_complexity 1602 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr1-3902 chr1 64841706 64841916 + 14.4 0.000 intron (NM_002227, intron 17 of 24) intron (NM_002227, intron 17 of 24) 96736 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr6-496 chr6 44246314 44246524 + 14.4 0.000 promoter-TSS (NM_007355) promoter-TSS (NM_007355) 253 NM_001271970 3326 Hs.509736 NM_007355 ENSG00000096384 HSP90AB1 D6S182|HSP84|HSP90B|HSPC2|HSPCB heat shock protein 90 alpha family class B member 1 protein-coding chr8-856 chr8 25073868 25074078 + 14.4 0.000 Intergenic Intergenic -110716 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr18-880 chr18 44839463 44839673 + 14.4 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 130598 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr3-3154 chr3 170564060 170564270 + 14.4 0.000 intron (NM_020949, intron 1 of 7) intron (NM_020949, intron 1 of 7) 21910 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr20-925 chr20 4488984 4489194 + 14.4 0.000 Intergenic Intergenic -197367 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr4-732 chr4 7328971 7329181 + 14.4 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 18626 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr2-2493 chr2 149744857 149745067 + 14.4 0.000 intron (NR_110240, intron 2 of 2) intron (NR_110240, intron 2 of 2) 114229 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr2-2058 chr2 184597446 184597656 + 14.4 0.000 promoter-TSS (NM_194250) promoter-TSS (NM_194250) -978 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr1-8701 chr1 226807308 226807518 + 14.4 0.000 Intergenic Intergenic -63159 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr12-2444 chr12 52645142 52645352 + 14.4 0.000 exon (NM_000423, exon 9 of 9) exon (NM_000423, exon 9 of 9) 6964 NM_000423 3849 Hs.707 NM_000423 ENSG00000172867 KRT2 CK-2e|K2e|KRT2A|KRT2E|KRTE keratin 2 protein-coding chr2-4833 chr2 69082378 69082588 + 14.4 0.000 intron (NM_032208, intron 8 of 17) intron (NM_032208, intron 8 of 17) -21199 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr3-2948 chr3 58411093 58411303 + 14.4 0.000 intron (NM_001349532, intron 13 of 13) intron (NM_001349532, intron 13 of 13) 22634 NM_000925 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding KZ208922.1-1 KZ208922.1 41983 42193 + 14.4 0.000 NA NA NA NA chr7-900 chr7 44196459 44196669 + 14.4 0.000 Intergenic Intergenic -4414 NM_006555 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr1-5851 chr1 246821708 246821918 + 14.4 0.000 Intergenic Intergenic 32196 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr1-4147 chr1 7955904 7956114 + 14.4 0.000 Intergenic MIRc|SINE|MIR -5645 NM_001123377 11315 Hs.419640 NM_007262 ENSG00000116288 PARK7 DJ-1|DJ1|GATD2|HEL-S-67p Parkinsonism associated deglycase protein-coding chr17-1541 chr17 81395021 81395231 + 14.4 0.000 Intergenic CpG -4248 NM_001291324 57597 Hs.514580 NM_024696 ENSG00000266074 BAHCC1 BAHD2 BAH domain and coiled-coil containing 1 protein-coding chr16-1193 chr16 11567221 11567431 + 14.4 0.000 intron (NR_024320, intron 1 of 3) AluSx|SINE|Alu 19047 NM_004862 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr1-2462 chr1 64921152 64921362 + 14.4 0.000 intron (NM_001321852, intron 1 of 24) intron (NM_001321852, intron 1 of 24) 45292 NM_002227 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr18-819 chr18 3985154 3985364 + 14.4 0.000 intron (NR_102696, intron 1 of 4) intron (NR_102696, intron 1 of 4) 22906 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA chr4-707 chr4 74038661 74038871 + 14.4 0.000 promoter-TSS (NM_002090) promoter-TSS (NM_002090) -77 NM_002090 2921 Hs.89690 NM_002090 ENSG00000163734 CXCL3 CINC-2b|GRO3|GROg|MIP-2b|MIP2B|SCYB3 C-X-C motif chemokine ligand 3 protein-coding chr13-925 chr13 74206176 74206386 + 14.4 0.000 Intergenic Intergenic -25163 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr2-3752 chr2 3534834 3535044 + 14.4 0.000 intron (NR_148532, intron 9 of 10) L1MB3|LINE|L1 -15408 NM_018269 55256 Hs.502773 NM_018269 ENSG00000182551 ADI1 APL1|ARD|Fe-ARD|HMFT1638|MTCBP1|Ni-ARD|SIPL|mtnD acireductone dioxygenase 1 protein-coding chr13-326 chr13 44884366 44884576 + 14.4 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -74841 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr20-716 chr20 57066064 57066274 + 14.4 0.000 Intergenic Intergenic -147527 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr6-1379 chr6 89462595 89462805 + 14.4 0.000 intron (NM_001242809, intron 1 of 15) intron (NM_001242809, intron 1 of 15) 29522 NM_014942 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr2-2753 chr2 190859501 190859711 + 14.4 0.000 Intergenic Intergenic -21215 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr2-2253 chr2 234026003 234026213 + 14.4 0.000 Intergenic Intergenic -24594 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr1-3269 chr1 220498341 220498551 + 14.4 0.000 Intergenic LTR85b|LTR|Gypsy? -29690 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr9-1035 chr9 132252558 132252768 + 14.4 0.000 Intergenic LTR13|LTR|ERVK 90605 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr13-269 chr13 42049181 42049391 + 14.4 0.000 intron (NM_178009, intron 1 of 29) CpG-6631 638 NM_178009 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr14-1612 chr14 101770904 101771114 + 14.4 0.000 intron (NM_001352915, intron 2 of 14) intron (NM_001352915, intron 2 of 14) 8639 NM_001352915 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr2-1879 chr2 64698862 64699072 + 14.4 0.000 Intergenic Intergenic -45054 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr12-1360 chr12 49260241 49260451 + 14.4 0.000 intron (NM_001303117, intron 2 of 4) intron (NM_001303117, intron 2 of 4) -4736 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr17-1765 chr17 29177660 29177870 + 14.4 0.000 promoter-TSS (NM_001346767) promoter-TSS (NM_001346767) -992 NM_001346767 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr12-2412 chr12 47967316 47967526 + 14.4 0.000 intron (NM_001143842, intron 7 of 7) intron (NM_001143842, intron 7 of 7) 3825 NM_001143842 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr11-1952 chr11 123166215 123166425 + 14.4 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 28928 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr2-5479 chr2 133431344 133431554 + 14.4 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 137014 NM_207363 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr9-2442 chr9 4838015 4838225 + 14.4 0.000 intron (NM_005772, intron 5 of 8) intron (NM_005772, intron 5 of 8) -1649 NM_001286701 10171 Hs.194121 NM_005772 ENSG00000120158 RCL1 RNAC|RPCL1 RNA terminal phosphate cyclase like 1 protein-coding chr9-1890 chr9 120926151 120926361 + 14.4 0.000 5' UTR (NM_005658, exon 2 of 8) 5' UTR (NM_005658, exon 2 of 8) 540 NM_005658 7185 Hs.531251 NM_005658 ENSG00000056558 TRAF1 EBI6|MGC:10353 TNF receptor associated factor 1 protein-coding chr1-2467 chr1 80023463 80023673 + 14.4 0.000 Intergenic Intergenic -512187 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr8-4294 chr8 96857299 96857509 + 14.4 0.000 intron (NM_016134, intron 3 of 7) intron (NM_016134, intron 3 of 7) 212162 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr19-1976 chr19 2195456 2195666 + 14.4 0.000 intron (NM_032482, intron 7 of 27) intron (NM_032482, intron 7 of 27) 31628 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr3-4512 chr3 101043458 101043668 + 14.4 0.000 Intergenic Intergenic -50073 NM_001349330 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr18-1007 chr18 46028183 46028393 + 14.4 0.000 intron (NM_024430, intron 2 of 14) CpG 43972 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr17-4464 chr17 57727876 57728086 + 14.4 0.000 Intergenic Intergenic 17318 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr18-1043 chr18 7569579 7569789 + 14.4 0.000 intron (NM_002845, intron 1 of 30) intron (NM_002845, intron 1 of 30) 2368 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr21-197 chr21 37563992 37564202 + 14.4 0.000 Intergenic CpG 143798 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr6-1767 chr6 75094730 75094940 + 14.4 0.000 intron (NM_080645, intron 45 of 50) intron (NM_080645, intron 45 of 50) 33947 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr7-2721 chr7 34155292 34155502 + 14.4 0.000 3' UTR (NM_001365308, exon 15 of 15) 3' UTR (NM_001365308, exon 15 of 15) 249858 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr2-1492 chr2 217854624 217854834 + 14.4 0.000 intron (NM_001308023, intron 15 of 29) intron (NM_001308023, intron 15 of 29) -20996 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr1-6207 chr1 208695304 208695514 + 14.4 0.000 Intergenic LTR43|LTR|ERV1 -33279 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr7-2026 chr7 69895999 69896209 + 14.4 0.000 intron (NM_015570, intron 1 of 18) intron (NM_015570, intron 1 of 18) 297629 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr9-2138 chr9 111949240 111949450 + 14.4 0.000 Intergenic ERVL-B4-int|LTR|ERVL 17245 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr6-1357 chr6 45617618 45617828 + 14.4 0.000 Intergenic L3b|LINE|CR1 195448 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr2-2459 chr2 99648556 99648766 + 14.4 0.000 intron (NM_001025108, intron 12 of 23) intron (NM_001025108, intron 12 of 23) -158644 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr2-2990 chr2 43864668 43864878 + 14.4 0.000 intron (NM_001357321, intron 6 of 12) intron (NM_001357321, intron 6 of 12) 25802 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr13-1044 chr13 95649146 95649356 + 14.4 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -4545 NM_014934 22873 Hs.656580 NM_014934 ENSG00000134874 DZIP1 DZIP|DZIPt1 DAZ interacting zinc finger protein 1 protein-coding chr7-2773 chr7 70041121 70041331 + 14.4 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 442751 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr15-1261 chr15 80955882 80956092 + 14.4 0.000 intron (NR_126328, intron 1 of 2) intron (NR_126328, intron 1 of 2) 33832 NR_126327 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr4-4452 chr4 54152920 54153130 + 14.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 52862 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr10-1633 chr10 84296581 84296791 + 14.4 0.000 Intergenic LTR88b|LTR|Gypsy? 16706 NR_038220 170425 Hs.434131 NR_038220 ENSG00000229404 LINC00858 CRCAL-2 long intergenic non-protein coding RNA 858 ncRNA chr11-1663 chr11 7579562 7579772 + 14.4 0.000 intron (NM_001351860, intron 1 of 21) intron (NM_001351860, intron 1 of 21) 1776 NM_001351860 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr21-336 chr21 45944213 45944423 + 14.4 0.000 Intergenic Intergenic -28652 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr11-1556 chr11 64653281 64653491 + 14.4 0.000 intron (NM_138732, intron 10 of 19) intron (NM_138732, intron 10 of 19) -9841 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr7-817 chr7 23531374 23531584 + 14.4 0.000 intron (NM_001282759, intron 1 of 9) CpG-25622 502 NM_001362760 29896 Hs.445652 NM_013293 ENSG00000164548 TRA2A AWMS1|HSU53209 transformer 2 alpha homolog protein-coding chr17-2070 chr17 68592857 68593067 + 14.4 0.000 intron (NM_001243746, intron 1 of 11) intron (NM_001243746, intron 1 of 11) 8405 NM_017565 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding chr4-827 chr4 168758647 168758857 + 14.4 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -73343 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr1-5220 chr1 185670376 185670586 + 14.4 0.000 Intergenic Intergenic -41993 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr22-2162 chr22 42969358 42969568 + 14.4 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) -9127 NM_001349970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr19-1392 chr19 16019129 16019339 + 14.4 0.000 intron (NR_026828, intron 2 of 8) intron (NR_026828, intron 2 of 8) 3600 NR_026828 126536 Hs.131824 NR_026828 ENSG00000205396 LINC00661 - long intergenic non-protein coding RNA 661 ncRNA chr13-2142 chr13 102720054 102720264 + 14.4 0.000 Intergenic Intergenic -25638 NM_001010977 196541 Hs.508623 NM_001010977 ENSG00000139780 METTL21C C13orf39 methyltransferase like 21C protein-coding chr5-1017 chr5 119452510 119452720 + 14.4 0.000 exon (NM_000414, exon 1 of 24) exon (NM_000414, exon 1 of 24) 118 NM_001199291 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr3-1703 chr3 46845490 46845700 + 14.4 0.000 Intergenic Intergenic -11500 NR_160554 339906 Hs.585127 NM_182702 ENSG00000178055 PRSS42P PRSS42|TESSP2 serine protease 42, pseudogene pseudo chr3-870 chr3 169966673 169966883 + 14.4 0.000 promoter-TSS (NR_027622) promoter-TSS (NR_027622) -29 NM_003262 7095 Hs.744859 NM_003262 ENSG00000008952 SEC62 Dtrp1|HTP1|TLOC1|TP-1 SEC62 homolog, preprotein translocation factor protein-coding chr14-2034 chr14 61940666 61940876 + 14.4 0.000 intron (NM_001367663, intron 1 of 7) intron (NM_001367663, intron 1 of 7) 13076 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr3-2010 chr3 27423575 27423785 + 14.4 0.000 intron (NM_001258380, intron 7 of 23) intron (NM_001258380, intron 7 of 23) 33098 NM_003615 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr19-2724 chr19 33529456 33529666 + 14.4 0.000 Intergenic Intergenic -7770 NM_001166056 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr5-2111 chr5 61596827 61597037 + 14.4 0.000 Intergenic L4_A_Mam|LINE|RTE-X -40828 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr8-715 chr8 26267178 26267388 + 14.4 0.000 Intergenic Intergenic -24225 NM_002717 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr8-1403 chr8 48470865 48471075 + 14.4 0.000 Intergenic Intergenic -80597 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chrX-437 chrX 70168667 70168877 + 14.4 0.000 Intergenic Intergenic -8711 NM_198512 347516 Hs.454355 NM_198512 ENSG00000184210 DGAT2L6 DC3 diacylglycerol O-acyltransferase 2 like 6 protein-coding chr9-1124 chr9 104868957 104869167 + 14.4 0.000 intron (NM_005502, intron 5 of 49) G-rich|Low_complexity|Low_complexity 59093 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr19-1342 chr19 16383260 16383470 + 14.4 0.000 intron (NM_021235, intron 21 of 22) intron (NM_021235, intron 21 of 22) 58539 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr3-1200 chr3 27369348 27369558 + 14.4 0.000 promoter-TSS (NM_199347) promoter-TSS (NM_199347) 7 NM_152534 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr2-8357 chr2 109469189 109469399 + 14.4 0.000 intron (NM_001099289, intron 8 of 9) intron (NM_001099289, intron 8 of 9) 144373 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr16-2309 chr16 20354960 20355170 + 14.4 0.000 Intergenic MER74A|LTR|ERVL -2187 NM_003361 7369 Hs.654425 NM_003361 ENSG00000169344 UMOD ADMCKD2|FJHN|HNFJ|HNFJ1|MCKD2|THGP|THP uromodulin protein-coding chr2-3729 chr2 237502380 237502590 + 14.4 0.000 intron (NM_024101, intron 2 of 15) intron (NM_024101, intron 2 of 15) -8446 NR_106869 102465486 NR_106869 ENSG00000277842 MIR6811 hsa-mir-6811 microRNA 6811 ncRNA chr4-2499 chr4 16653727 16653937 + 14.4 0.000 intron (NM_001304435, intron 2 of 7) intron (NM_001304435, intron 2 of 7) 244813 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr3-4071 chr3 95781999 95782209 + 14.4 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -98911 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chrX-868 chrX 150370783 150370993 + 14.4 0.000 intron (NM_001177465, intron 1 of 4) intron (NM_001177465, intron 1 of 4) 7571 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr8-2052 chr8 119514880 119515090 + 14.4 0.000 Intergenic Intergenic 78023 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr2-2962 chr2 28621544 28621754 + 14.4 0.000 intron (NR_138141, intron 27 of 35) intron (NR_138141, intron 27 of 35) 55292 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2-4147 chr2 172704475 172704685 + 14.4 0.000 Intergenic Intergenic -31265 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr1-5665 chr1 35436558 35436768 + 14.4 0.000 intron (NM_024874, intron 20 of 20) (AAC)n|Simple_repeat|Simple_repeat -70586 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr4-2855 chr4 61200670 61200880 + 14.4 0.000 promoter-TSS (NM_001322402) promoter-TSS (NM_001322402) -455 NM_001371346 chr16-1508 chr16 25048533 25048743 + 14.4 0.000 Intergenic Intergenic 16897 NR_038379 554206 Hs.552959 NR_038379 ENSG00000262587 LOC554206 - leucine carboxyl methyltransferase 1 pseudogene pseudo chr6-1108 chr6 112906880 112907090 + 14.4 0.000 Intergenic Intergenic 526462 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr16-2085 chr16 87709097 87709307 + 14.4 0.000 intron (NM_001184856, intron 9 of 10) CpG 56784 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr1-4335 chr1 59013689 59013899 + 14.4 0.000 Intergenic Intergenic -6682 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr4-1294 chr4 98710923 98711133 + 14.4 0.000 Intergenic Intergenic 52126 NR_148380 105377342 Hs.122081 NR_148380 LOC105377342 - uncharacterized LOC105377342 ncRNA chrX-2841 chrX 138888371 138888581 + 14.4 0.000 intron (NM_001139500, intron 2 of 6) intron (NM_001139500, intron 2 of 6) -20921 NM_001139502 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr9-1454 chr9 136928842 136929052 + 14.4 0.000 Intergenic L1MB7|LINE|L1 15791 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr11-2060 chr11 72683928 72684138 + 14.4 0.000 Intergenic Intergenic -9611 NM_002599 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr5-2965 chr5 169862037 169862247 + 14.4 0.000 3' UTR (NM_001346304, exon 4 of 4) 3' UTR (NM_001346304, exon 4 of 4) 118353 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr2-3382 chr2 20352322 20352532 + 14.4 0.000 promoter-TSS (NM_001352925) promoter-TSS (NM_001352925) -174 NM_001352925 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr7-1564 chr7 55212847 55213057 + 14.4 0.000 Intergenic Intergenic -24003 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr11-1000 chr11 3854912 3855122 + 14.4 0.000 promoter-TSS (NM_003156) promoter-TSS (NM_003156) -647 NM_001277962 6786 Hs.501735 NM_003156 ENSG00000167323 STIM1 D11S4896E|GOK|IMD10|STRMK|TAM|TAM1 stromal interaction molecule 1 protein-coding chr18-461 chr18 25805407 25805617 + 14.4 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 285101 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr3-4056 chr3 77530956 77531166 + 14.4 0.000 intron (NM_001290039, intron 7 of 26) intron (NM_001290039, intron 7 of 26) 433049 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr3-3123 chr3 149566419 149566629 + 14.4 0.000 intron (NM_001348362, intron 6 of 9) intron (NM_001348362, intron 6 of 9) 91501 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr1-1839 chr1 7942268 7942478 + 14.4 0.000 intron (NM_001561, intron 1 of 8) CpG 792 NM_001561 3604 Hs.86447 NM_001561 ENSG00000049249 TNFRSF9 4-1BB|CD137|CDw137|ILA TNF receptor superfamily member 9 protein-coding chr8-2857 chr8 133769383 133769593 + 14.4 0.000 Intergenic MER4D1|LTR|ERV1 7864 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr10-1493 chr10 5071845 5072055 + 14.4 0.000 intron (NM_001253908, intron 1 of 8) MER67A|LTR|ERV1 -22464 NM_001253909 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding chr1-3603 chr1 25174023 25174233 + 14.4 0.000 Intergenic Intergenic 58374 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr4-3112 chr4 163448613 163448823 + 14.4 0.000 Intergenic Intergenic 25036 NM_032136 84076 Hs.303923 NM_032136 ENSG00000151005 TKTL2 - transketolase like 2 protein-coding chr14-294 chr14 50532606 50532816 + 14.4 0.000 promoter-TSS (NM_006575) promoter-TSS (NM_006575) -142 NM_006575 11183 Hs.130491 NM_006575 ENSG00000012983 MAP4K5 GCKR|KHS|KHS1|MAPKKKK5 mitogen-activated protein kinase kinase kinase kinase 5 protein-coding chr2-2033 chr2 119253429 119253639 + 14.4 0.000 intron (NM_138637, intron 3 of 5) intron (NM_138637, intron 3 of 5) -4463 NR_046721 100874111 Hs.704682 NR_046721 ENSG00000229867 STEAP3-AS1 - STEAP3 antisense RNA 1 ncRNA chr5-781 chr5 171450684 171450894 + 14.4 0.000 intron (NM_003862, intron 4 of 4) CpG 31142 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr5-1095 chr5 98310093 98310303 + 14.4 0.000 Intergenic LTR33|LTR|ERVL -148959 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr15-999 chr15 70788192 70788402 + 14.4 0.000 Intergenic L2b|LINE|L2 -24739 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr9-1330 chr9 87276534 87276744 + 14.4 0.000 Intergenic Intergenic 127995 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr14-838 chr14 69049816 69050026 + 14.4 0.000 TTS (NM_001284206) TTS (NM_001284206) 70239 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr3-3054 chr3 126607249 126607459 + 14.4 0.000 3' UTR (NM_052883, exon 16 of 16) 3' UTR (NM_052883, exon 16 of 16) 47770 NM_052883 114112 Hs.477475 NM_052883 ENSG00000197763 TXNRD3 TGR|TR2|TR2IT1|TRXR3|TXNRD3IT1|TXNRD3NB|TXNRD3NT1 thioredoxin reductase 3 protein-coding chr17-2350 chr17 64245847 64246057 + 14.4 0.000 intron (NM_018469, intron 1 of 11) intron (NM_018469, intron 1 of 11) -15218 NM_001288733 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr12-1186 chr12 83621894 83622104 + 14.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 934844 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-4225 chr2 217710199 217710409 + 14.4 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 46289 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr3-2757 chr3 141623722 141623932 + 14.4 0.000 Intergenic Intergenic -39372 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr12-1604 chr12 49183061 49183271 + 14.4 0.000 Intergenic AluSx1|SINE|Alu 5914 NM_006009 7846 Hs.654422 NM_006009 ENSG00000167552 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin alpha 1a protein-coding chr17-2935 chr17 51418782 51418992 + 14.4 0.000 Intergenic Intergenic -16540 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr9-2831 chr9 126206965 126207175 + 14.4 0.000 Intergenic Intergenic 68845 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr13-1248 chr13 99357243 99357453 + 14.4 0.000 intron (NR_026644, intron 7 of 8) intron (NR_026644, intron 7 of 8) 1217 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr5-2867 chr5 80069220 80069430 + 14.4 0.000 intron (NR_109930, intron 6 of 7) intron (NR_109930, intron 6 of 7) 14340 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr11-3994 chr11 3105966 3106176 + 14.4 0.000 intron (NM_020896, intron 9 of 21) intron (NM_020896, intron 9 of 21) -48648 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr6-1153 chr6 3722788 3722998 + 14.4 0.000 3' UTR (NM_183373, exon 5 of 5) 3' UTR (NM_183373, exon 5 of 5) 29119 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr6-582 chr6 124961849 124962059 + 14.4 0.000 promoter-TSS (NM_001286398) promoter-TSS (NM_001286398) -591 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr12-1900 chr12 69648645 69648855 + 14.4 0.000 intron (NM_001282614, intron 9 of 9) intron (NM_001282614, intron 9 of 9) -37843 NM_201550 376132 Hs.448708 NM_201550 ENSG00000198812 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding chr2-2104 chr2 241777963 241778173 + 14.4 0.000 intron (NM_022134, intron 1 of 3) intron (NM_022134, intron 1 of 3) 1246 NM_022134 64090 Hs.632556 NM_022134 ENSG00000154252 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding chr6-1003 chr6 21200199 21200409 + 14.4 0.000 intron (NM_017774, intron 14 of 15) intron (NM_017774, intron 14 of 15) 311588 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr10-2727 chr10 110733649 110733859 + 14.4 0.000 intron (NM_001134363, intron 1 of 13) intron (NM_001134363, intron 1 of 13) 89418 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr4-2087 chr4 33628889 33629099 + 14.4 0.000 Intergenic (ATCT)n|Simple_repeat|Simple_repeat 410899 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr1-3939 chr1 98669713 98669923 + 14.4 0.000 intron (NR_033716, intron 2 of 8) intron (NR_033716, intron 2 of 8) 8097 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr1-4963 chr1 53656424 53656634 + 14.4 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 77675 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr1-5243 chr1 201751092 201751302 + 14.4 0.000 intron (NM_001167738, intron 1 of 26) UCON78|DNA|DNA 11297 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr7-2765 chr7 55570971 55571181 + 14.4 0.000 intron (NM_001321244, intron 1 of 5) intron (NM_001321244, intron 1 of 5) 792 NM_001321250 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr9-2549 chr9 130206681 130206891 + 14.4 0.000 intron (NM_014286, intron 2 of 7) intron (NM_014286, intron 2 of 7) 6386 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr3-1331 chr3 72310536 72310746 + 14.4 0.000 Intergenic Intergenic 135982 NM_012234 23429 Hs.7910 NM_012234 ENSG00000163602 RYBP AAP1|APAP-1|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding chr11-2392 chr11 2200509 2200719 + 14.4 0.000 Intergenic Intergenic 27551 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr6-3731 chr6 5030768 5030978 + 14.4 0.000 intron (NR_126018, intron 1 of 1) MER3|DNA|hAT-Charlie 901 NR_126018 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr6-1095 chr6 81327276 81327486 + 14.4 0.000 Intergenic L1MCc|LINE|L1 425300 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr3-1639 chr3 101902062 101902272 + 14.4 0.000 Intergenic Intergenic -38692 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr6-5209 chr6 132715291 132715501 + 14.4 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -1341 NM_004666 8876 Hs.12114 NM_004666 ENSG00000112299 VNN1 HDLCQ8|Tiff66 vanin 1 protein-coding chr4-5336 chr4 183587964 183588174 + 14.4 0.000 Intergenic Intergenic 71116 NM_001307922 201965 Hs.133337 NM_152682 ENSG00000182552 RWDD4 FAM28A|RWDD4A RWD domain containing 4 protein-coding chr21-210 chr21 46033737 46033947 + 14.4 0.000 Intergenic CpG 52093 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr4-4286 chr4 25839843 25840053 + 14.4 0.000 intron (NM_001297592, intron 2 of 23) intron (NM_001297592, intron 2 of 23) 23040 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding chr4-5380 chr4 188562936 188563146 + 14.4 0.000 intron (NR_033869, intron 4 of 4) L1PA2|LINE|L1 107463 NR_033869 401164 Hs.435756 NR_033869 ENSG00000249378 LINC01060 - long intergenic non-protein coding RNA 1060 ncRNA chr16-1355 chr16 89006030 89006240 + 14.4 0.000 Intergenic L2b|LINE|L2 -28928 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr5-886 chr5 123036658 123036868 + 14.4 0.000 promoter-TSS (NM_000943) promoter-TSS (NM_000943) -38 NM_000943 5480 Hs.110364 NM_000943 ENSG00000168938 PPIC CYPC peptidylprolyl isomerase C protein-coding chr6-2037 chr6 64124262 64124472 + 14.4 0.000 intron (NM_001292009, intron 31 of 43) intron (NM_001292009, intron 31 of 43) 317531 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr4-1024 chr4 9532320 9532530 + 14.4 0.000 Intergenic CpG 23891 NR_031688 100302277 NR_031688 ENSG00000221275 MIR548I2 MIR548I-2|MIRN548I2|hsa-mir-548i-2|mir-548i-2 microRNA 548i-2 ncRNA chr8-1602 chr8 142815773 142815983 + 14.4 0.000 Intergenic Intergenic -18923 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr3-2076 chr3 190345331 190345541 + 14.4 0.000 Intergenic Intergenic -22990 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr15-837 chr15 42148386 42148596 + 14.4 0.000 intron (NM_213600, intron 11 of 19) MER20|DNA|hAT-Charlie 8145 NR_033151 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr17-1974 chr17 30380735 30380945 + 14.4 0.000 intron (NM_001199775, intron 1 of 20) intron (NM_001199775, intron 1 of 20) 362 NM_001199775 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr6-928 chr6 36885967 36886177 + 14.4 0.000 intron (NM_152734, intron 1 of 7) CpG 120 NM_152734 221477 Hs.433381 NM_152734 ENSG00000198663 C6orf89 BRAP|PS1TP5TP1 chromosome 6 open reading frame 89 protein-coding chr3-5620 chr3 9862588 9862798 + 14.4 0.000 Intergenic CpG 16119 NM_001199623 63924 Hs.567562 NM_022094 ENSG00000187288 CIDEC CIDE-3|CIDE3|FPLD5|FSP27 cell death inducing DFFA like effector c protein-coding chr1-4505 chr1 27873198 27873408 + 14.4 0.000 intron (NM_001105556, intron 1 of 5) L2b|LINE|L2 759 NM_001105556 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1|ICB1 thymocyte selection associated family member 2 protein-coding chr15-1094 chr15 63250416 63250626 + 14.4 0.000 intron (NM_016530, intron 3 of 7) intron (NM_016530, intron 3 of 7) -27029 NM_001145646 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chr14-2177 chr14 95671002 95671212 + 14.4 0.000 intron (NR_028288, intron 6 of 7) L2a|LINE|L2 -15319 NM_004918 9623 Hs.632346 NM_004918 ENSG00000213231 TCL1B SYN-1|TML1 T cell leukemia/lymphoma 1B protein-coding chr21-361 chr21 36917540 36917750 + 14.4 0.000 intron (NM_001352515, intron 5 of 10) intron (NM_001352515, intron 5 of 10) 44713 NM_001352518 3141 Hs.371350 NM_000411 ENSG00000159267 HLCS HCS holocarboxylase synthetase protein-coding chr2-2623 chr2 62884498 62884708 + 14.4 0.000 intron (NM_001142615, intron 10 of 22) intron (NM_001142615, intron 10 of 22) 163108 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr6-761 chr6 132202724 132202934 + 14.4 0.000 Intergenic Intergenic 68851 NR_038981 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr13-1702 chr13 90674078 90674288 + 14.4 0.000 Intergenic Intergenic 180895 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr15-1509 chr15 52095587 52095797 + 14.4 0.000 Intergenic Intergenic 17083 NM_001306168 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr5-2413 chr5 111737954 111738164 + 14.4 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) 18192 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chrX-357 chrX 109760720 109760930 + 14.4 0.000 Intergenic L1MCa|LINE|L1 -27433 NM_022977 2182 Hs.268785 NM_004458 ENSG00000068366 ACSL4 ACS4|FACL4|LACS4|MRX63|MRX68 acyl-CoA synthetase long chain family member 4 protein-coding chr22-423 chr22 35381060 35381270 + 14.4 0.000 promoter-TSS (NM_002133) promoter-TSS (NM_002133) 69 NM_002133 3162 Hs.517581 NM_002133 ENSG00000100292 HMOX1 HMOX1D|HO-1|HSP32|bK286B10 heme oxygenase 1 protein-coding chr16-1703 chr16 2997394 2997604 + 14.4 0.000 Intergenic Intergenic -1456 NR_110949 101929613 Hs.741644 NR_110947 LOC101929613 LA16c-380H5.3 uncharacterized LOC101929613 ncRNA chr4-1044 chr4 52051745 52051955 + 14.4 0.000 intron (NM_001346103, intron 1 of 8) CpG 546 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr5-2342 chr5 72290583 72290793 + 14.4 0.000 intron (NM_001286748, intron 4 of 11) intron (NM_001286748, intron 4 of 11) 29552 NM_001286748 23107 Hs.482491 NM_015084 ENSG00000113048 MRPS27 MRP-S27|S27mt mitochondrial ribosomal protein S27 protein-coding chr2-2212 chr2 96122406 96122616 + 14.4 0.000 Intergenic Intergenic -5940 NM_000682 151 Hs.247686 NM_000682 ENSG00000274286 ADRA2B ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR adrenoceptor alpha 2B protein-coding chr15-1173 chr15 100042660 100042870 + 14.4 0.000 intron (NM_139057, intron 18 of 21) Tigger7|DNA|TcMar-Tigger 235742 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr15-1190 chr15 40436126 40436336 + 14.4 0.000 TTS (NM_001354601) TTS (NM_001354601) -3526 NM_001301132 22893 Hs.22109 NM_014952 ENSG00000140320 BAHD1 - bromo adjacent homology domain containing 1 protein-coding chr17-1173 chr17 42473182 42473392 + 14.4 0.000 intron (NM_005177, intron 5 of 20) intron (NM_005177, intron 5 of 20) 14409 NM_001130021 535 Hs.463074 NM_005177 ENSG00000033627 ATP6V0A1 ATP6N1|ATP6N1A|Stv1|VPP1|Vph1|a1 ATPase H+ transporting V0 subunit a1 protein-coding chr2-1307 chr2 26772734 26772944 + 14.4 0.000 intron (NM_017877, intron 1 of 5) intron (NM_017877, intron 1 of 5) 8555 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr8-1235 chr8 121132947 121133157 + 14.4 0.000 Intergenic MamGypLTR3a|LTR|Gypsy -321006 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr17-1951 chr17 82205172 82205382 + 14.4 0.000 intron (NM_001367828, intron 1 of 16) intron (NM_001367828, intron 1 of 16) 7565 NM_001367828 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr3-2911 chr3 51578354 51578564 + 14.4 0.000 intron (NM_001322253, intron 3 of 23) intron (NM_001322253, intron 3 of 23) 36870 NM_001322257 23132 Hs.105399 NM_015106 ENSG00000164080 RAD54L2 ARIP4|HSPC325|SRISNF2L RAD54 like 2 protein-coding chr5-1668 chr5 53360928 53361138 + 14.4 0.000 Intergenic Intergenic -119596 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr15-471 chr15 77546057 77546267 + 14.4 0.000 Intergenic Intergenic 20567 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr13-634 chr13 101512805 101513015 + 14.4 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 22958 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr11-1596 chr11 20097363 20097573 + 14.4 0.000 intron (NM_182964, intron 30 of 37) intron (NM_182964, intron 30 of 37) -48165 NR_046672 100874014 Hs.557916 NR_046672 ENSG00000254453 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA chr5-2905 chr5 126370864 126371074 + 14.4 0.000 intron (NM_001146319, intron 1 of 13) intron (NM_001146319, intron 1 of 13) 10849 NM_001146319 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr18-1422 chr18 9925496 9925706 + 14.4 0.000 intron (NM_194434, intron 1 of 5) L2a|LINE|L2 11585 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr2-1414 chr2 127614861 127615071 + 14.4 0.000 intron (NM_001080527, intron 25 of 46) L2c|LINE|L2 -30898 NM_001161415 2840 Hs.46453 NM_005291 ENSG00000144230 GPR17 - G protein-coupled receptor 17 protein-coding chr1-2824 chr1 37807586 37807796 + 14.4 0.000 promoter-TSS (NM_001142726) promoter-TSS (NM_001142726) -99 NM_198446 127687 Hs.532749 NM_198446 ENSG00000197982 C1orf122 ALAESM chromosome 1 open reading frame 122 protein-coding chr12-4625 chr12 41771480 41771690 + 14.4 0.000 Intergenic LTR50|LTR|ERVL 7396 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr10-4203 chr10 108535298 108535508 + 14.4 0.000 Intergenic L1P1|LINE|L1 -466110 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr22-2494 chr22 22158289 22158499 + 14.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -86392 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr10-5096 chr10 47185916 47186126 + 14.4 0.000 Intergenic L1ME1|LINE|L1 -114176 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr16-3377 chr16 60687058 60687268 + 14.4 0.000 Intergenic Intergenic -327370 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr10-1312 chr10 72297373 72297583 + 14.4 0.000 Intergenic Intergenic 23554 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr21-528 chr21 38403466 38403676 + 14.4 0.000 exon (NM_001243428, exon 6 of 12) exon (NM_001243428, exon 6 of 12) -57495 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr9-4991 chr9 21406999 21407209 + 14.4 0.000 Intergenic MLT2A2|LTR|ERVL -2013 NM_002170 3445 Hs.73890 NM_002170 ENSG00000120242 IFNA8 IFN-alphaB interferon alpha 8 protein-coding chr3-8040 chr3 195923931 195924141 + 14.4 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -15027 NM_005781 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr5-1115 chr5 34329708 34329918 + 14.4 0.000 Intergenic L1PA15|LINE|L1 -85089 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr3-2028 chr3 71817189 71817399 + 14.4 0.000 Intergenic MIR|SINE|MIR -32146 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr13-790 chr13 88282209 88282419 + 14.4 0.000 Intergenic HERVL-int|LTR|ERVL 139447 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr8-718 chr8 37736354 37736564 + 14.4 0.000 promoter-TSS (NM_001003791) promoter-TSS (NM_001003791) -175 NM_007175 11160 Hs.669261 NM_007175 ENSG00000147475 ERLIN2 C8orf2|Erlin-2|NET32|SPFH2|SPG18 ER lipid raft associated 2 protein-coding chr6-5050 chr6 113104588 113104798 + 14.4 0.000 Intergenic Intergenic 328754 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr2-4161 chr2 178256591 178256801 + 14.4 0.000 intron (NM_001201480, intron 1 of 25) intron (NM_001201480, intron 1 of 25) 62184 NM_032523 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr7-3535 chr7 8296107 8296317 + 14.4 0.000 intron (NR_125740, intron 3 of 5) intron (NR_125740, intron 3 of 5) -33600 NM_004968 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr5-2839 chr5 60579874 60580084 + 14.4 0.000 Intergenic LTR41B|LTR|ERVL -83693 NM_001364599 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr4-1882 chr4 3516575 3516785 + 14.4 0.000 intron (NM_002337, intron 5 of 7) intron (NM_002337, intron 5 of 7) 15469 NR_110005 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr3-6771 chr3 142319235 142319445 + 14.4 0.000 intron (NM_019001, intron 37 of 41) MER58A|DNA|hAT-Charlie -93755 NM_001039547 256356 Hs.135904 NM_152776 ENSG00000175066 GK5 - glycerol kinase 5 protein-coding chr3-2325 chr3 130052511 130052721 + 14.4 0.000 Intergenic Intergenic -29215 NM_001136152 644974 Hs.722197 NM_001136152 ENSG00000251287 ALG1L2 - ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2 protein-coding chr2-4862 chr2 100253179 100253389 + 14.4 0.000 Intergenic Intergenic 45030 NR_103730 150577 Hs.434127 NM_001102655 ENSG00000232084 LINC01104 - long intergenic non-protein coding RNA 1104 ncRNA chr7-2550 chr7 90958678 90958888 + 14.4 0.000 intron (NM_012395, intron 8 of 13) intron (NM_012395, intron 8 of 13) 248967 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chrX-308 chrX 41275988 41276198 + 14.4 0.000 non-coding (NR_135616, exon 2 of 2) non-coding (NR_135616, exon 2 of 2) 354 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr2-3693 chr2 209473917 209474127 + 14.3 0.000 intron (NM_001039538, intron 1 of 14) intron (NM_001039538, intron 1 of 14) 49975 NM_001039538 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr12-1117 chr12 49538741 49538951 + 14.3 0.000 promoter-TSS (NM_001314030) promoter-TSS (NM_001314030) -184 NM_001314030 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr7-2560 chr7 104972490 104972700 + 14.3 0.000 Intergenic Charlie13b|DNA|hAT-Charlie 18570 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr18-852 chr18 25164361 25164571 + 14.3 0.000 intron (NM_001308225, intron 4 of 6) intron (NM_001308225, intron 4 of 6) -176487 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr3-3327 chr3 196253665 196253875 + 14.3 0.000 intron (NM_005017, intron 4 of 9) intron (NM_005017, intron 4 of 9) 33956 NM_001312673 5130 Hs.135997 NM_005017 ENSG00000161217 PCYT1A CCTA|CT|CTA|CTPCT|PCYT1|SMDCRD phosphate cytidylyltransferase 1, choline, alpha protein-coding chr20-662 chr20 63949130 63949340 + 14.3 0.000 intron (NR_148442, intron 1 of 15) intron (NR_148442, intron 1 of 15) 1952 NM_001193379 54963 Hs.504998 NM_017859 ENSG00000198276 UCKL1 UCK1L|URKL1 uridine-cytidine kinase 1 like 1 protein-coding chr16-1826 chr16 54576530 54576740 + 14.3 0.000 Intergenic Intergenic -205936 NR_134923 100996345 Hs.112680 NR_134922 ENSG00000261803 LINC02140 - long intergenic non-protein coding RNA 2140 ncRNA chr4-964 chr4 26525240 26525450 + 14.3 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -34861 NM_000730 886 Hs.129 NM_000730 ENSG00000163394 CCKAR CCK-A|CCK1-R|CCK1R|CCKRA cholecystokinin A receptor protein-coding chr10-1981 chr10 34045748 34045958 + 14.3 0.000 Intergenic L1PA10|LINE|L1 -273173 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr6-2074 chr6 129911715 129911925 + 14.3 0.000 Intergenic Intergenic -50505 NM_001010876 253582 NM_001010876 ENSG00000203756 TMEM244 C6orf191|bA174C7.4 transmembrane protein 244 protein-coding chr7-1662 chr7 84648294 84648504 + 14.3 0.000 Intergenic Intergenic 115923 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr7-1539 chr7 143318703 143318913 + 14.3 0.000 intron (NR_046453, intron 1 of 21) intron (NR_046453, intron 1 of 21) 2697 NR_046453 1180 Hs.121483 NM_000083 ENSG00000188037 CLCN1 CLC1 chloride voltage-gated channel 1 protein-coding chrX-581 chrX 85922805 85923015 + 14.3 0.000 intron (NM_001320959, intron 8 of 14) intron (NM_001320959, intron 8 of 14) -19203 NR_029848 494323 NR_029848 ENSG00000199051 MIR361 MIRN361|hsa-mir-361|mir-361 microRNA 361 ncRNA chr11-1633 chr11 74850019 74850229 + 14.3 0.000 intron (NM_001270380, intron 11 of 14) intron (NM_001270380, intron 11 of 14) 98967 NM_001270380 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr6-925 chr6 24283220 24283430 + 14.3 0.000 intron (NM_016356, intron 6 of 9) intron (NM_016356, intron 6 of 9) -73578 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr2-2900 chr2 222298947 222299157 + 14.3 0.000 promoter-TSS (NM_181461) promoter-TSS (NM_181461) -54 NM_181457 5077 Hs.42146 NM_000438 ENSG00000135903 PAX3 CDHS|HUP2|WS1|WS3 paired box 3 protein-coding chr2-1754 chr2 85729117 85729327 + 14.3 0.000 Intergenic Intergenic -24769 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr2-3005 chr2 46968044 46968254 + 14.3 0.000 intron (NM_001288951, intron 3 of 20) intron (NM_001288951, intron 3 of 20) -26294 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr1-1489 chr1 206501423 206501633 + 14.3 0.000 Intergenic Intergenic -6003 NM_182664 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr4-1221 chr4 151370931 151371141 + 14.3 0.000 Intergenic MER5A|DNA|hAT-Charlie -38140 NM_001348694 729830 Hs.633810 NM_001109977 ENSG00000164142 FAM160A1 - family with sequence similarity 160 member A1 protein-coding chr19-1749 chr19 3088735 3088945 + 14.3 0.000 Intergenic AluY|SINE|Alu -5522 NM_002067 2767 Hs.650575 NM_002067 ENSG00000088256 GNA11 FBH|FBH2|FHH2|GNA-11|HHC2|HYPOC2 G protein subunit alpha 11 protein-coding chr4-1480 chr4 13355108 13355318 + 14.3 0.000 Intergenic Intergenic 129127 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr19-1568 chr19 2474869 2475079 + 14.3 0.000 Intergenic CpG -1153 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr8-1666 chr8 30155275 30155485 + 14.3 0.000 promoter-TSS (NM_006571) promoter-TSS (NM_006571) -989 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chrX-397 chrX 20266916 20267126 + 14.3 0.000 promoter-TSS (NM_004586) promoter-TSS (NM_004586) -112 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr16-1339 chr16 64417786 64417996 + 14.3 0.000 Intergenic Intergenic 704172 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr3-1798 chr3 40116920 40117130 + 14.3 0.000 intron (NM_001284426, intron 1 of 14) intron (NM_001284426, intron 1 of 14) 17014 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr9-1813 chr9 98039699 98039909 + 14.3 0.000 Intergenic LTR8|LTR|ERV1 -16928 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr15-1255 chr15 79978749 79978959 + 14.3 0.000 Intergenic Intergenic -7658 NM_004049 597 Hs.227817 NM_004049 ENSG00000140379 BCL2A1 ACC-1|ACC-2|ACC1|ACC2|BCL2L5|BFL1|GRS|HBPA1 BCL2 related protein A1 protein-coding chr16-1588 chr16 1446276 1446486 + 14.3 0.000 3' UTR (NM_001114331, exon 24 of 24) 3' UTR (NM_001114331, exon 24 of 24) -1892 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr2-4256 chr2 224545946 224546156 + 14.3 0.000 intron (NM_001257197, intron 1 of 14) intron (NM_001257197, intron 1 of 14) 23904 NM_001257198 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chrX-333 chrX 103630123 103630333 + 14.3 0.000 exon (NM_004780, exon 3 of 3) exon (NM_004780, exon 3 of 3) 1253 NM_001006639 9338 Hs.95243 NM_004780 ENSG00000172465 TCEAL1 SIIR|WEX9|p21|pp21 transcription elongation factor A like 1 protein-coding chr15-1019 chr15 84164718 84164928 + 14.3 0.000 Intergenic Intergenic 6161 NR_033787 440299 Hs.454641 NR_033787 DNM1P41 DNM1DN11-6|DNM1DN11.6|DNM1DN11@ dynamin 1 pseudogene 41 pseudo chr11-1434 chr11 66015891 66016101 + 14.3 0.000 TTS (NM_053054) TTS (NM_053054) 3988 NM_001323 1474 Hs.139389 NM_001323 ENSG00000175315 CST6 - cystatin E/M protein-coding chr2-1790 chr2 239268263 239268473 + 14.3 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -37094 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr2-4019 chr2 101446993 101447203 + 14.3 0.000 intron (NM_001367509, intron 4 of 13) intron (NM_001367509, intron 4 of 13) 28014 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr4-901 chr4 94545292 94545502 + 14.3 0.000 intron (NM_001011516, intron 3 of 9) intron (NM_001011516, intron 3 of 9) 93455 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr8-1339 chr8 61583666 61583876 + 14.3 0.000 intron (NM_004318, intron 15 of 24) intron (NM_004318, intron 15 of 24) 106040 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr1-2132 chr1 230269036 230269246 + 14.3 0.000 intron (NM_004481, intron 14 of 15) AluYg6|SINE|Alu 157191 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr11-1306 chr11 64036514 64036724 + 14.3 0.000 intron (NM_014067, intron 3 of 10) CpG 50766 NM_017670 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr8-2291 chr8 122638846 122639056 + 14.3 0.000 Intergenic Intergenic 55155 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr2-2364 chr2 228675189 228675399 + 14.3 0.000 Intergenic Intergenic -63899 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr2-4573 chr2 84880626 84880836 + 14.3 0.000 intron (NM_001307978, intron 1 of 4) CpG 353 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr8-1073 chr8 123065541 123065751 + 14.3 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -7061 NM_001330606 93594 Hs.492716 NM_145647 ENSG00000156787 TBC1D31 Gm85|WDR67 TBC1 domain family member 31 protein-coding chr6-960 chr6 33702331 33702541 + 14.3 0.000 intron (NM_032340, intron 1 of 3) intron (NM_032340, intron 1 of 3) 4308 NR_037498 100500873 NR_037498 ENSG00000266509 MIR3934 - microRNA 3934 ncRNA chr8-1708 chr8 119637531 119637741 + 14.3 0.000 intron (NM_001330600, intron 2 of 25) intron (NM_001330600, intron 2 of 25) 1203 NM_006209 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr22-977 chr22 28381471 28381681 + 14.3 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -78293 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr19-1998 chr19 13040544 13040754 + 14.3 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 15870 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr10-877 chr10 59388091 59388301 + 14.3 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -25015 NM_001347840 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr6-3019 chr6 49126671 49126881 + 14.3 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 336477 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr6-1166 chr6 39892676 39892886 + 14.3 0.000 intron (NR_125831, intron 1 of 3) intron (NR_125831, intron 1 of 3) 4599 NR_125831 100505635 Hs.668513 NR_125831 ENSG00000235033 LOC100505635 - uncharacterized LOC100505635 ncRNA chr16-1104 chr16 87850125 87850335 + 14.3 0.000 intron (NM_003486, intron 2 of 9) intron (NM_003486, intron 2 of 9) -3666 NR_162122 113218509 NR_162122 MIR11401 - microRNA 11401 ncRNA chr10-3593 chr10 88932736 88932946 + 14.3 0.000 non-coding (NR_125373, exon 1 of 5) non-coding (NR_125373, exon 1 of 5) 157 NR_125373 100132116 NR_125373 ENSG00000180139 ACTA2-AS1 UC001kfo|ZXF1|uc001kfo.1 ACTA2 antisense RNA 1 ncRNA chr2-2267 chr2 9781373 9781583 + 14.3 0.000 Intergenic Intergenic -61964 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr7-1909 chr7 1813469 1813679 + 14.3 0.000 Intergenic Intergenic 30679 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr6-1030 chr6 138862406 138862616 + 14.3 0.000 intron (NM_001077706, intron 10 of 21) MSTB|LTR|ERVL-MaLR 66400 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr17-2252 chr17 12388259 12388469 + 14.3 0.000 Intergenic L2a|LINE|L2 -161604 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chr20-751 chr20 25399100 25399310 + 14.3 0.000 Intergenic HERVK3-int|LTR|ERVK -8370 NM_015600 26090 Hs.441550 NM_015600 ENSG00000100997 ABHD12 ABHD12A|BEM46L2|C20orf22|PHARC|dJ965G21.2|hABHD12 abhydrolase domain containing 12 protein-coding chr1-5196 chr1 176843852 176844062 + 14.3 0.000 3' UTR (NM_020318, exon 23 of 23) 3' UTR (NM_020318, exon 23 of 23) 185488 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr16-1687 chr16 89365244 89365454 + 14.3 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) 44216 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr10-1712 chr10 72320864 72321074 + 14.3 0.000 Intergenic Intergenic 33950 NM_001365081 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr14-1932 chr14 22145524 22145734 + 14.3 0.000 Intergenic L2|LINE|L2 287124 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr19-1349 chr19 36152617 36152827 + 14.3 0.000 promoter-TSS (NM_001864) promoter-TSS (NM_001864) -275 NM_001864 1346 Hs.421621 NM_001864 ENSG00000161281 COX7A1 COX7A|COX7AH|COX7AM cytochrome c oxidase subunit 7A1 protein-coding chr7-1399 chr7 5612922 5613132 + 14.3 0.000 Intergenic Intergenic 20211 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr7-1818 chr7 106110094 106110304 + 14.3 0.000 intron (NM_182715, intron 1 of 4) intron (NM_182715, intron 1 of 4) 2113 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr2-2205 chr2 69139172 69139382 + 14.3 0.000 intron (NM_032208, intron 12 of 17) L2c|LINE|L2 35595 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr16-1961 chr16 69463448 69463658 + 14.3 0.000 3' UTR (NM_030579, exon 5 of 5) 3' UTR (NM_030579, exon 5 of 5) 38958 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr14-1237 chr14 102580014 102580224 + 14.3 0.000 Intergenic Intergenic -12530 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr8-1581 chr8 132016705 132016915 + 14.3 0.000 Intergenic MIR3|SINE|MIR 42572 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr13-352 chr13 24512561 24512771 + 14.3 0.000 intron (NM_006437, intron 1 of 33) CpG 112 NM_006437 143 Hs.744855 NM_006437 ENSG00000102699 PARP4 ADPRTL1|ARTD4|PARP-4|PARPL|PH5P|VAULT3|VPARP|VWA5C|p193 poly(ADP-ribose) polymerase family member 4 protein-coding chr14-1467 chr14 105422815 105423025 + 14.3 0.000 intron (NM_001203258, intron 1 of 20) intron (NM_001203258, intron 1 of 20) 3093 NM_001203258 9112 Hs.525629 NM_004689 ENSG00000182979 MTA1 - metastasis associated 1 protein-coding chr1-3288 chr1 236673352 236673562 + 14.3 0.000 Intergenic Intergenic -12997 NM_001103 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr12-1725 chr12 30795330 30795540 + 14.3 0.000 promoter-TSS (NR_040245) promoter-TSS (NR_040245) -246 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr11-6521 chr11 69087573 69087783 + 14.3 0.000 intron (NM_139075, intron 24 of 24) intron (NM_139075, intron 24 of 24) 4502 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr3-2050 chr3 138774853 138775063 + 14.3 0.000 intron (NM_006219, intron 2 of 23) intron (NM_006219, intron 2 of 23) 59970 NM_006219 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr5-1849 chr5 123700719 123700929 + 14.3 0.000 Intergenic Intergenic 155407 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chrX-289 chrX 77786041 77786251 + 14.3 0.000 promoter-TSS (NM_138270) promoter-TSS (NM_138270) 70 NM_000489 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr7-1591 chr7 111357776 111357986 + 14.3 0.000 intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) 204410 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr4-2183 chr4 109986189 109986399 + 14.3 0.000 intron (NM_001357021, intron 15 of 19) intron (NM_001357021, intron 15 of 19) 73411 NM_001178131 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr22-803 chr22 22934533 22934743 + 14.3 0.000 Intergenic Intergenic 46822 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr6-679 chr6 155247714 155247924 + 14.3 0.000 intron (NM_001010927, intron 5 of 12) intron (NM_001010927, intron 5 of 12) -16194 NM_001001346 49861 Hs.567491 NM_001001346 ENSG00000171217 CLDN20 - claudin 20 protein-coding chr5-4236 chr5 133634761 133634971 + 14.3 0.000 Intergenic Intergenic -22325 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr1-4730 chr1 2939372 2939582 + 14.3 0.000 Intergenic Intergenic -81990 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr3-3803 chr3 15185135 15185345 + 14.3 0.000 intron (NR_027927, intron 1 of 4) MER5A|DNA|hAT-Charlie 20719 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen type VI alpha 4 pseudogene 1 pseudo chr5-981 chr5 14145295 14145505 + 14.3 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 2058 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr3-3023 chr3 111592280 111592490 + 14.3 0.000 TTS (NM_024508) TTS (NM_024508) 2961 NM_024508 79413 Hs.136912 NM_024508 ENSG00000177494 ZBED2 - zinc finger BED-type containing 2 protein-coding chr3-2623 chr3 188683078 188683288 + 14.3 0.000 intron (NM_005578, intron 6 of 10) intron (NM_005578, intron 6 of 10) -5598 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr11-2068 chr11 77883991 77884201 + 14.3 0.000 intron (NM_033547, intron 21 of 22) intron (NM_033547, intron 21 of 22) 42958 NM_001363564 28971 Hs.745040 NM_024684 ENSG00000087884 AAMDC C11orf67|CK067|PTD015 adipogenesis associated Mth938 domain containing protein-coding chr9-5351 chr9 89658185 89658395 + 14.3 0.000 intron (NR_024280, intron 1 of 5) MLT1H1|LTR|ERVL-MaLR 18507 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr15-1414 chr15 50884107 50884317 + 14.3 0.000 Intergenic Intergenic -24471 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr3-2673 chr3 46374238 46374448 + 14.3 0.000 3' UTR (NM_001100168, exon 3 of 3) 3' UTR (NM_001100168, exon 3 of 3) 4201 NM_001100168 1234 Hs.450802 NM_000579 ENSG00000160791 CCR5 CC-CKR-5|CCCKR5|CCR-5|CD195|CKR-5|CKR5|CMKBR5|IDDM22 C-C motif chemokine receptor 5 (gene/pseudogene) protein-coding chr2-3614 chr2 102122136 102122346 + 14.3 0.000 intron (NM_001320980, intron 1 of 11) intron (NM_001320980, intron 1 of 11) 17637 NM_001320986 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr4-2598 chr4 125063035 125063245 + 14.3 0.000 Intergenic Intergenic -253272 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr11-5680 chr11 132032809 132033019 + 14.3 0.000 intron (NR_147849, intron 2 of 6) L2a|LINE|L2 122096 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr3-3187 chr3 185781853 185782063 + 14.3 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) -14054 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr2-2237 chr2 215700652 215700862 + 14.3 0.000 intron (NR_037195, intron 5 of 9) intron (NR_037195, intron 5 of 9) -17286 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr17-3867 chr17 47983741 47983951 + 14.3 0.000 Intergenic Intergenic 12733 NM_176096 80279 Hs.20157 NM_025197 ENSG00000108465 CDK5RAP3 C53|HSF-27|IC53|LZAP|MST016|OK/SW-cl.114|PP1553 CDK5 regulatory subunit associated protein 3 protein-coding chr8-578 chr8 121631870 121632080 + 14.3 0.000 intron (NM_005328, intron 1 of 3) intron (NM_005328, intron 1 of 3) -7371 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr16-1922 chr16 89912095 89912305 + 14.3 0.000 TTS (NM_014972) TTS (NM_014972) -5679 NM_002386 4157 Hs.513829 NM_002386 ENSG00000258839 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor protein-coding chr10-2316 chr10 45008419 45008629 + 14.3 0.000 Intergenic Intergenic 7601 NM_006963 7570 Hs.462693 NM_006963 ENSG00000165512 ZNF22 HKR-T1|KOX15|ZNF422|Zfp422 zinc finger protein 22 protein-coding chr8-2613 chr8 60554204 60554414 + 14.3 0.000 intron (NM_001242644, intron 1 of 6) intron (NM_001242644, intron 1 of 6) 37322 NM_002865 5862 Hs.369017 NM_002865 ENSG00000104388 RAB2A LHX|RAB2 RAB2A, member RAS oncogene family protein-coding chr14-855 chr14 22815682 22815892 + 14.3 0.000 promoter-TSS (NR_040448) promoter-TSS (NR_040448) 111 NM_001126105 9056 Hs.513147 NM_003982 ENSG00000155465 SLC7A7 LAT3|LPI|MOP-2|Y+LAT1|y+LAT-1 solute carrier family 7 member 7 protein-coding chr19-1486 chr19 12640336 12640546 + 14.3 0.000 Intergenic Intergenic 26301 NM_000528 4125 Hs.356769 NM_000528 ENSG00000104774 MAN2B1 LAMAN|MANB mannosidase alpha class 2B member 1 protein-coding chr16-856 chr16 82627616 82627826 + 14.3 0.000 intron (NM_001220492, intron 1 of 5) CpG 752 NM_001220490 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr20-1018 chr20 10708795 10709005 + 14.3 0.000 Intergenic Intergenic -34901 NM_000214 182 Hs.224012 NM_000214 ENSG00000101384 JAG1 AGS|AGS1|AHD|AWS|CD339|DCHE|HJ1|JAGL1 jagged canonical Notch ligand 1 protein-coding chrX-1050 chrX 118638085 118638295 + 14.3 0.000 intron (NM_144658, intron 37 of 52) intron (NM_144658, intron 37 of 52) -89416 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr2-930 chr2 72887151 72887361 + 14.3 0.000 promoter-TSS (NM_003124) promoter-TSS (NM_003124) -152 NM_003124 6697 Hs.301540 NM_003124 ENSG00000116096 SPR SDR38C1 sepiapterin reductase protein-coding chr6-5229 chr6 135274887 135275097 + 14.3 0.000 Intergenic Intergenic 35832 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr2-3213 chr2 221518853 221519063 + 14.3 0.000 intron (NM_001363748, intron 3 of 17) intron (NM_001363748, intron 3 of 17) 53346 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-1511 chr3 142279963 142280173 + 14.3 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 -54483 NM_001039547 256356 Hs.135904 NM_152776 ENSG00000175066 GK5 - glycerol kinase 5 protein-coding chr1-2344 chr1 2441925 2442135 + 14.3 0.000 Intergenic Intergenic -25421 NM_001303012 9651 Hs.170156 NM_014638 ENSG00000149527 PLCH2 PLC-L4|PLC-eta2|PLCL4|PLCeta2 phospholipase C eta 2 protein-coding chr8-1237 chr8 123241247 123241457 + 14.3 0.000 promoter-TSS (NM_032847) promoter-TSS (NM_032847) 25 NM_032847 84933 Hs.707401 NM_032847 ENSG00000189376 C8orf76 - chromosome 8 open reading frame 76 protein-coding chr7-2160 chr7 52956402 52956612 + 14.3 0.000 Intergenic LTR30|LTR|ERV1 -79126 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr16-3450 chr16 97629 97839 + 14.3 0.000 intron (NM_001039476, intron 6 of 10) intron (NM_001039476, intron 6 of 10) 19509 NM_001015052 4350 Hs.459596 NM_002434 ENSG00000103152 MPG AAG|ADPG|APNG|CRA36.1|MDG|Mid1|PIG11|PIG16|anpg N-methylpurine DNA glycosylase protein-coding chr2-2292 chr2 55051209 55051419 + 14.3 0.000 promoter-TSS (NM_153828) promoter-TSS (NM_153828) -42 NM_001321859 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr19-1850 chr19 13016856 13017066 + 14.3 0.000 intron (NM_001365902, intron 1 of 10) intron (NM_001365902, intron 1 of 10) -7011 NM_001271044 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr15-363 chr15 95132863 95133073 + 14.3 0.000 Intergenic Helitron3Na_Mam|RC|Helitron 194132 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr10-1781 chr10 73577898 73578108 + 14.3 0.000 intron (NM_001350995, intron 1 of 21) intron (NM_001350995, intron 1 of 21) -2328 NM_152586 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr7-1332 chr7 2412702 2412912 + 14.3 0.000 intron (NM_018641, intron 1 of 1) MIR|SINE|MIR 9196 NM_001243795 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr14-1039 chr14 100417022 100417232 + 14.3 0.000 intron (NM_001350949, intron 2 of 6) intron (NM_001350949, intron 2 of 6) 40642 NM_024515 79446 Hs.497599 NM_024515 ENSG00000176473 WDR25 C14orf67 WD repeat domain 25 protein-coding chr1-2523 chr1 244835523 244835733 + 14.3 0.000 promoter-TSS (NM_198076) promoter-TSS (NM_198076) -30 NM_198076 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr12-1694 chr12 122440475 122440685 + 14.3 0.000 Intergenic AluJb|SINE|Alu -17911 NM_198240 6249 Hs.524809 NM_002956 ENSG00000130779 CLIP1 CLIP|CLIP-170|CLIP170|CYLN1|RSN CAP-Gly domain containing linker protein 1 protein-coding chr6-1977 chr6 157813886 157814096 + 14.3 0.000 Intergenic LTR54|LTR|ERV1 -9255 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr7-1245 chr7 5418542 5418752 + 14.3 0.000 intron (NM_001080495, intron 2 of 29) intron (NM_001080495, intron 2 of 29) 4899 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr12-1487 chr12 25458376 25458586 + 14.3 0.000 Intergenic L2c|LINE|L2 94802 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chrX-341 chrX 9279052 9279262 + 14.3 0.000 Intergenic Intergenic -184138 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr17-1400 chr17 49230809 49231019 + 14.3 0.000 promoter-TSS (NM_178500) promoter-TSS (NM_178500) -127 NM_178500 162466 Hs.405607 NM_178500 ENSG00000173868 PHOSPHO1 - phosphoethanolamine/phosphocholine phosphatase protein-coding chr8-1661 chr8 23514607 23514817 + 14.3 0.000 Intergenic MER33|DNA|hAT-Charlie -14244 NM_001317812 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr2-4024 chr2 102258621 102258831 + 14.3 0.000 Intergenic Intergenic -52776 NM_001282408 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr18-1307 chr18 68874696 68874906 + 14.3 0.000 intron (NM_001093729, intron 7 of 9) intron (NM_001093729, intron 7 of 9) 76721 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr7-3193 chr7 121016965 121017175 + 14.3 0.000 intron (NM_001105533, intron 2 of 17) intron (NM_001105533, intron 2 of 17) 27679 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr12-1788 chr12 120931045 120931255 + 14.3 0.000 Intergenic Intergenic 26455 NR_131215 105500240 Hs.742757 NR_131215 XLOC_009911 - uncharacterized LOC105500240 ncRNA chr17-907 chr17 74982130 74982340 + 14.3 0.000 Intergenic CpG -5397 NM_014603 30850 Hs.78358 NM_014603 ENSG00000109089 CDR2L HUMPPA cerebellar degeneration related protein 2 like protein-coding chr1-6741 chr1 67044661 67044871 + 14.3 0.000 intron (NM_015139, intron 7 of 11) intron (NM_015139, intron 7 of 11) 9382 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr9-1862 chr9 69570026 69570236 + 14.3 0.000 intron (NM_001163, intron 1 of 12) intron (NM_001163, intron 1 of 12) 102240 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr6-814 chr6 57222301 57222511 + 14.3 0.000 promoter-TSS (NM_016277) promoter-TSS (NM_016277) -92 NR_103822 51715 Hs.555016 NM_016277 ENSG00000112210 RAB23 HSPC137 RAB23, member RAS oncogene family protein-coding chr1-1623 chr1 150067612 150067822 + 14.3 0.000 promoter-TSS (NM_001279354) promoter-TSS (NM_001279354) -59 NM_007259 11311 Hs.443750 NM_007259 ENSG00000136631 VPS45 H1|H1VPS45|SCN5|VPS45A|VPS45B|VPS54A|VSP45|VSP45A vacuolar protein sorting 45 homolog protein-coding chr4-944 chr4 123248487 123248697 + 14.3 0.000 intron (NM_001345856, intron 14 of 15) intron (NM_001345856, intron 14 of 15) -148203 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr16-1348 chr16 84986697 84986907 + 14.3 0.000 intron (NM_017740, intron 3 of 7) intron (NM_017740, intron 3 of 7) 24733 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr2-1188 chr2 98758159 98758369 + 14.3 0.000 Intergenic Intergenic 13634 NR_126337 101927070 Hs.469395 NR_126337 LINC02611 - long intergenic non-protein coding RNA 2611 ncRNA chr10-1505 chr10 17923796 17924006 + 14.3 0.000 Intergenic Intergenic -27938 NM_001282733 221074 Hs.350895 NM_152725 ENSG00000148482 SLC39A12 LZT-Hs8|ZIP-12|bA570F3.1 solute carrier family 39 member 12 protein-coding chr11-1404 chr11 11983155 11983365 + 14.3 0.000 intron (NM_015881, intron 4 of 7) intron (NM_015881, intron 4 of 7) 25379 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr10-2558 chr10 68574350 68574560 + 14.3 0.000 intron (NM_030625, intron 2 of 11) intron (NM_030625, intron 2 of 11) 14118 NM_030625 80312 Hs.258855 NM_030625 ENSG00000138336 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding chr20-296 chr20 3846749 3846959 + 14.3 0.000 promoter-TSS (NM_001206491) promoter-TSS (NM_001206491) 20 NR_037921 57506 Hs.570362 NM_020746 ENSG00000088888 MAVS CARDIF|IPS-1|IPS1|VISA mitochondrial antiviral signaling protein protein-coding chr17-2044 chr17 46975451 46975661 + 14.3 0.000 Intergenic Intergenic 2539 NR_049812 100847067 NR_049812 ENSG00000264999 MIR5089 - microRNA 5089 ncRNA chr1-2149 chr1 9267050 9267260 + 14.3 0.000 3' UTR (NM_004285, exon 5 of 5) 3' UTR (NM_004285, exon 5 of 5) -25739 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr3-2554 chr3 56926689 56926899 + 14.3 0.000 intron (NM_001128615, intron 3 of 12) intron (NM_001128615, intron 3 of 12) -10358 NM_001289698 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr1-2295 chr1 24724868 24725078 + 14.3 0.000 Intergenic L2b|LINE|L2 -20474 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr4-2162 chr4 92234482 92234692 + 14.3 0.000 Intergenic L1ME5|LINE|L1 42715 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr15-1867 chr15 62570070 62570280 + 14.3 0.000 Intergenic Intergenic 75006 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr17-1372 chr17 78144256 78144466 + 14.3 0.000 Intergenic Intergenic -2024 NM_001163075 100141515 Hs.633034 NM_001163075 ENSG00000187997 C17orf99 IL-40|UNQ464 chromosome 17 open reading frame 99 protein-coding chr18-767 chr18 12785976 12786186 + 14.3 0.000 intron (NM_080423, intron 8 of 8) intron (NM_080423, intron 8 of 8) -36659 NR_110763 100996324 Hs.333275 NR_110763 LINC01882 - long intergenic non-protein coding RNA 1882 ncRNA chr22-1438 chr22 45595310 45595520 + 14.3 0.000 intron (NM_006486, intron 16 of 16) intron (NM_006486, intron 16 of 16) 10232 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr22-1456 chr22 49768452 49768662 + 14.3 0.000 Intergenic Intergenic 55774 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr15-800 chr15 64693173 64693383 + 14.3 0.000 intron (NM_002537, intron 1 of 4) intron (NM_002537, intron 1 of 4) 10003 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr7-884 chr7 130893537 130893747 + 14.3 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) -16103 NR_029517 407024 NR_029517 ENSG00000283797 MIR29B1 MIRN29B1|miR-29b|miRNA29B1|mir-29b-1 microRNA 29b-1 ncRNA chr3-716 chr3 5122074 5122284 + 14.3 0.000 promoter-TSS (NM_018184) promoter-TSS (NM_018184) -113 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr8-1155 chr8 19225346 19225556 + 14.3 0.000 intron (NR_038919, intron 3 of 4) intron (NR_038919, intron 3 of 4) 20071 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr13-640 chr13 114226752 114226962 + 14.3 0.000 Intergenic Intergenic -7988 NM_003903 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chr16-1410 chr16 2269343 2269553 + 14.3 0.000 intron (NR_132988, intron 1 of 2) intron (NR_132988, intron 1 of 2) 785 NR_132988 106660606 Hs.729989 NR_132988 ENSG00000260778 LOC106660606 - uncharacterized LOC106660606 ncRNA chr10-1308 chr10 70313145 70313355 + 14.3 0.000 intron (NM_018205, intron 3 of 3) intron (NM_018205, intron 3 of 3) -29246 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr3-1569 chr3 45133808 45134018 + 14.3 0.000 intron (NM_178181, intron 1 of 3) intron (NM_178181, intron 1 of 3) 12465 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr16-1821 chr16 48353636 48353846 + 14.3 0.000 3' UTR (NM_001300948, exon 14 of 14) 3' UTR (NM_001300948, exon 14 of 14) 12146 NM_001006610 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr19-1932 chr19 5886749 5886959 + 14.3 0.000 Intergenic Intergenic -16314 NM_002034 2527 Hs.631843 NM_002034 ENSG00000130383 FUT5 FUC-TV fucosyltransferase 5 protein-coding chr10-1464 chr10 94193300 94193510 + 14.3 0.000 intron (NM_001165979, intron 3 of 31) intron (NM_001165979, intron 3 of 31) -84611 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr2-2156 chr2 209369007 209369217 + 14.3 0.000 Intergenic Intergenic -54935 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr14-262 chr14 34714588 34714798 + 14.3 0.000 promoter-TSS (NM_138638) promoter-TSS (NM_138638) -100 NM_138638 1073 Hs.180141 NM_021914 ENSG00000165410 CFL2 NEM7 cofilin 2 protein-coding chr17-1397 chr17 41895526 41895736 + 14.3 0.000 intron (NM_198830, intron 13 of 27) intron (NM_198830, intron 13 of 27) 23320 NM_001096 47 Hs.387567 NM_001096 ENSG00000131473 ACLY ACL|ATPCL|CLATP ATP citrate lyase protein-coding chr12-686 chr12 101877512 101877722 + 14.3 0.000 promoter-TSS (NM_018370) promoter-TSS (NM_018370) 37 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr6-1886 chr6 136012212 136012422 + 14.3 0.000 intron (NM_018945, intron 2 of 12) intron (NM_018945, intron 2 of 12) 60510 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr11-2008 chr11 57648432 57648642 + 14.3 0.000 intron (NM_001363487, intron 1 of 5) intron (NM_001363487, intron 1 of 5) 1375 NM_145008 219539 Hs.135978 NM_145008 ENSG00000166793 YPEL4 - yippee like 4 protein-coding chr13-735 chr13 101399001 101399211 + 14.3 0.000 exon (NM_052867, exon 2 of 44) exon (NM_052867, exon 2 of 44) 17402 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr13-690 chr13 30577431 30577641 + 14.3 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) 40051 NM_001370340 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr20-640 chr20 62405394 62405604 + 14.3 0.000 intron (NM_031215, intron 1 of 9) intron (NM_031215, intron 1 of 9) 1784 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding chr2-3150 chr2 190858990 190859200 + 14.3 0.000 Intergenic Intergenic -21726 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding KI270736.1-4 KI270736.1 166797 167007 + 14.3 0.000 NA NA NA NA chr18-806 chr18 79950553 79950763 + 14.3 0.000 intron (NM_025078, intron 2 of 5) intron (NM_025078, intron 2 of 5) 995 NM_025078 80148 Hs.288284 NM_025078 ENSG00000122490 SLC66A2 PQLC1 solute carrier family 66 member 2 protein-coding chr2-2978 chr2 36429953 36430163 + 14.3 0.000 intron (NM_016441, intron 2 of 16) intron (NM_016441, intron 2 of 16) 74280 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr2-4816 chr2 54763758 54763968 + 14.3 0.000 intron (NM_001039753, intron 1 of 40) intron (NM_001039753, intron 1 of 40) 38851 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr19-1422 chr19 53980316 53980526 + 14.3 0.000 intron (NM_031895, intron 3 of 3) intron (NM_031895, intron 3 of 3) -1886 NR_030632 100126325 NR_030632 ENSG00000284583 MIR935 MIRN935|hsa-mir-935|mir-935 microRNA 935 ncRNA chr2-4204 chr2 202014864 202015074 + 14.3 0.000 Intergenic Intergenic -19618 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr11-2444 chr11 34223658 34223868 + 14.3 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 118134 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr1-2242 chr1 171422596 171422806 + 14.3 0.000 Intergenic LTR39|LTR|ERV1 -62829 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding chr10-1126 chr10 132384765 132384975 + 14.3 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -12330 NM_138499 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr10-3307 chr10 1134941 1135151 + 14.3 0.000 Intergenic L1ME3F|LINE|L1 -24722 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chrX-820 chrX 95225334 95225544 + 14.3 0.000 Intergenic L1PA8|LINE|L1 -162213 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr8-697 chr8 22574326 22574536 + 14.3 0.000 intron (NM_001018003, intron 9 of 9) intron (NM_001018003, intron 9 of 9) -4310 NM_021630 64236 Hs.632034 NM_021630 ENSG00000120913 PDLIM2 MYSTIQUE|SLIM PDZ and LIM domain 2 protein-coding chr8-798 chr8 117815074 117815284 + 14.3 0.000 intron (NM_000127, intron 7 of 10) intron (NM_000127, intron 7 of 10) 105734 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr7-1652 chr7 55884031 55884241 + 14.3 0.000 Intergenic Intergenic -3320 NM_001366796 349075 Hs.660834 NM_182633 ENSG00000178665 ZNF713 - zinc finger protein 713 protein-coding chr6-922 chr6 10951747 10951957 + 14.3 0.000 non-coding (NR_125851, exon 2 of 3) non-coding (NR_125851, exon 2 of 3) 2237 NR_125851 101928191 Hs.638939 NR_125851 LOC101928191 - uncharacterized LOC101928191 ncRNA chr1-2825 chr1 39154931 39155141 + 14.3 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 70869 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr1-4721 chr1 1806791 1807001 + 14.3 0.000 intron (NM_001282538, intron 3 of 9) AluSx|SINE|Alu -26865 NM_001353641 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr17-3001 chr17 74927333 74927543 + 14.3 0.000 intron (NM_178160, intron 4 of 6) intron (NM_178160, intron 4 of 6) 3163 NM_178160 92736 Hs.352515 NM_178160 ENSG00000183034 OTOP2 - otopetrin 2 protein-coding chr3-2204 chr3 17157778 17157988 + 14.3 0.000 3' UTR (NM_001349077, exon 22 of 22) 3' UTR (NM_001349077, exon 22 of 22) 224687 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr4-1301 chr4 108888367 108888577 + 14.3 0.000 intron (NM_198721, intron 17 of 36) intron (NM_198721, intron 17 of 36) -125419 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr2-1521 chr2 85183614 85183824 + 14.3 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) -2690 NR_046797 100874334 Hs.693125 NR_046797 ENSG00000231134 TCF7L1-IT1 - TCF7L1 intronic transcript 1 ncRNA chr13-610 chr13 23570395 23570605 + 14.3 0.000 promoter-TSS (NM_148957) promoter-TSS (NM_148957) 88 NM_148957 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr3-3635 chr3 113536566 113536776 + 14.3 0.000 intron (NM_001322297, intron 1 of 24) intron (NM_001322297, intron 1 of 24) 4116 NM_001322297 54847 Hs.591291 NM_017699 ENSG00000072858 SIDT1 SID-1|SID1 SID1 transmembrane family member 1 protein-coding chr11-2322 chr11 67418775 67418985 + 14.3 0.000 exon (NM_001166222, exon 5 of 10) exon (NM_001166222, exon 5 of 10) 3202 NM_001166222 57571 Hs.502982 NM_020811 ENSG00000172508 CARNS1 ATPGD1 carnosine synthase 1 protein-coding chr19-1791 chr19 51359485 51359695 + 14.3 0.000 intron (NM_001985, intron 1 of 5) (CA)n|Simple_repeat|Simple_repeat -4748 NM_001014763 2109 Hs.348531 NM_001985 ENSG00000105379 ETFB FP585|MADD electron transfer flavoprotein subunit beta protein-coding chr11-1501 chr11 34599570 34599780 + 14.3 0.000 Intergenic Intergenic -21418 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr1-10962 chr1 213724165 213724375 + 14.3 0.000 Intergenic AluSx|SINE|Alu -200479 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr8-1406 chr8 50056310 50056520 + 14.3 0.000 intron (NR_135798, intron 1 of 15) intron (NR_135798, intron 1 of 15) -107716 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr10-1871 chr10 93198934 93199144 + 14.3 0.000 Intergenic Intergenic 125146 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr4-1642 chr4 94446445 94446655 + 14.3 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -5307 NM_001256425 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr15-1034 chr15 95557580 95557790 + 14.3 0.000 Intergenic Intergenic 124592 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr16-1415 chr16 3066663 3066873 + 14.3 0.000 intron (NM_001012718, intron 2 of 6) LTR33C|LTR|ERVL 984 NM_001012636 9235 Hs.943 NM_004221 ENSG00000008517 IL32 IL-32alpha|IL-32beta|IL-32delta|IL-32gamma|NK4|TAIF|TAIFa|TAIFb|TAIFc|TAIFd interleukin 32 protein-coding chr17-2248 chr17 8124583 8124793 + 14.3 0.000 promoter-TSS (NM_001165967) promoter-TSS (NM_001165967) -582 NM_032580 84667 Hs.434828 NM_032580 ENSG00000179111 HES7 SCDO4|bHLHb37 hes family bHLH transcription factor 7 protein-coding chr20-369 chr20 45890118 45890328 + 14.3 0.000 promoter-TSS (NM_001167594) promoter-TSS (NM_001167594) 79 NM_000308 5476 Hs.609336 NM_000308 ENSG00000064601 CTSA GLB2|GSL|NGBE|PPCA|PPGB cathepsin A protein-coding chr18-226 chr18 49921291 49921501 + 14.3 0.000 intron (NM_001080467, intron 17 of 39) intron (NM_001080467, intron 17 of 39) 107373 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr2-1275 chr2 74740820 74741030 + 14.3 0.000 Intergenic Intergenic 86678 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr8-1824 chr8 127080925 127081135 + 14.3 0.000 non-coding (NR_109833, exon 1 of 1) non-coding (NR_109833, exon 1 of 1) 1156 NR_109833 101867536 Hs.652970 NR_109833 ENSG00000282961 PRNCR1 CARLo-3|PCAT8 prostate cancer associated non-coding RNA 1 ncRNA chr8-2037 chr8 109105649 109105859 + 14.3 0.000 intron (NM_003301, intron 2 of 2) MER58A|DNA|hAT-Charlie 19126 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr10-1752 chr10 14588107 14588317 + 14.3 0.000 intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) -15837 NM_001320735 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr3-1806 chr3 45647263 45647473 + 14.3 0.000 intron (NM_014240, intron 2 of 7) intron (NM_014240, intron 2 of 7) 41514 NR_033947 644714 Hs.712889 NR_033947 LIMD1-AS1 - LIMD1 antisense RNA 1 ncRNA chr7-2534 chr7 69131175 69131385 + 14.3 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 466344 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr18-386 chr18 59612501 59612711 + 14.3 0.000 intron (NM_133459, intron 2 of 10) MIRc|SINE|MIR 84817 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr3-1970 chr3 121432198 121432408 + 14.3 0.000 3' UTR (NM_199420, exon 30 of 30) 3' UTR (NM_199420, exon 30 of 30) 113685 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chr3-1400 chr3 124141048 124141258 + 14.3 0.000 intron (NM_001024660, intron 1 of 59) intron (NM_001024660, intron 1 of 59) 8224 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr17-821 chr17 48101126 48101336 + 14.3 0.000 promoter-TSS (NM_006807) promoter-TSS (NM_006807) -45 NM_006807 10951 Hs.77254 NM_006807 ENSG00000108468 CBX1 CBX|HP1-BETA|HP1Hs-beta|HP1Hsbeta|M31|MOD1|p25beta chromobox 1 protein-coding chr4-2780 chr4 18912224 18912434 + 14.3 0.000 Intergenic THE1D|LTR|ERVL-MaLR -890454 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr18-1065 chr18 27499611 27499821 + 14.3 0.000 Intergenic MER5B|DNA|hAT-Charlie -157060 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr4-2112 chr4 56757206 56757416 + 14.3 0.000 Intergenic Intergenic 64162 NR_073417 6691 Hs.98243 NM_021114 ENSG00000128040 SPINK2 HUSI-II|SPGF29 serine peptidase inhibitor, Kazal type 2 protein-coding chr5-2016 chr5 35423214 35423424 + 14.3 0.000 Intergenic L1MEd|LINE|L1 -192832 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr7-2928 chr7 135147298 135147508 + 14.3 0.000 promoter-TSS (NM_018295) promoter-TSS (NM_018295) -669 NM_018295 55281 Hs.521213 NM_018295 ENSG00000146859 TMEM140 - transmembrane protein 140 protein-coding chr11-2883 chr11 43943033 43943243 + 14.3 0.000 exon (NM_001145033, exon 1 of 1) exon (NM_001145033, exon 1 of 1) 501 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr6-1882 chr6 113104138 113104348 + 14.3 0.000 Intergenic Intergenic 329204 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr6-1463 chr6 17703441 17703651 + 14.3 0.000 intron (NM_005124, intron 1 of 21) intron (NM_005124, intron 1 of 21) -2584 NR_134616 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr8-2209 chr8 6558863 6559073 + 14.3 0.000 intron (NM_001147, intron 1 of 8) intron (NM_001147, intron 1 of 8) 4277 NM_001147 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr17-2944 chr17 57994521 57994731 + 14.3 0.000 Intergenic Intergenic -6372 NM_007146 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding chr5-1880 chr5 149134446 149134656 + 14.3 0.000 Intergenic Intergenic -6896 NM_001345859 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr16-2173 chr16 67816649 67816859 + 14.3 0.000 intron (NM_001288994, intron 2 of 10) intron (NM_001288994, intron 2 of 10) 9865 NM_001288993 55815 Hs.632212 NM_018430 ENSG00000102904 TSNAXIP1 TXI1 translin associated factor X interacting protein 1 protein-coding chr11-1281 chr11 73404199 73404409 + 14.3 0.000 3' UTR (NM_001286050, exon 9 of 9) 3' UTR (NM_001286050, exon 9 of 9) 27636 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr21-332 chr21 44815749 44815959 + 14.3 0.000 intron (NM_006936, intron 1 of 3) intron (NM_006936, intron 1 of 3) 2208 NM_006936 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr5-2353 chr5 77200865 77201075 + 14.3 0.000 intron (NM_001349752, intron 1 of 21) intron (NM_001349752, intron 1 of 21) -8923 NM_001349753 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr11-1286 chr11 104570166 104570376 + 14.3 0.000 intron (NR_120585, intron 2 of 3) L2|LINE|L2 39031 NR_120585 102723895 Hs.48803 NR_120585 ENSG00000256422 LINC02552 - long intergenic non-protein coding RNA 2552 ncRNA chr4-1703 chr4 169260224 169260434 + 14.3 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 10627 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr1-845 chr1 184386883 184387093 + 14.3 0.000 promoter-TSS (NM_030806) promoter-TSS (NM_030806) -41 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr2-3948 chr2 64273955 64274165 + 14.3 0.000 Intergenic Intergenic 45659 NR_120420 100507006 Hs.442789 NR_120420 LOC100507006 - uncharacterized LOC100507006 ncRNA chr13-649 chr13 33251292 33251502 + 14.3 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -26157 NR_046693 100874241 Hs.662433 NR_046693 ENSG00000236581 STARD13-AS STARD13-AS2 STARD13 antisense RNA ncRNA chr1-7282 chr1 240032915 240033125 + 14.3 0.000 Intergenic ERVL-E-int|LTR|ERVL 25496 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chr18-720 chr18 29165364 29165574 + 14.3 0.000 Intergenic Intergenic -988339 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr12-1396 chr12 114933645 114933855 + 14.3 0.000 Intergenic Intergenic -249575 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr2-2251 chr2 232652633 232652843 + 14.3 0.000 intron (NM_001308395, intron 2 of 4) intron (NM_001308395, intron 2 of 4) 19134 NM_025202 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr22-552 chr22 18091768 18091978 + 14.3 0.000 TTS (NM_001199319) TTS (NM_001199319) 13883 NM_001127649 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr20-304 chr20 47501688 47501898 + 14.3 0.000 promoter-TSS (NM_006534) promoter-TSS (NM_006534) -94 NM_006534 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr4-1897 chr4 18284993 18285203 + 14.3 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -263223 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr1-2712 chr1 231885421 231885631 + 14.3 0.000 intron (NM_001164541, intron 9 of 9) intron (NM_001164541, intron 9 of 9) -40308 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr7-1491 chr7 134814660 134814870 + 14.3 0.000 intron (NM_033157, intron 1 of 14) intron (NM_033157, intron 1 of 14) 35131 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr9-1617 chr9 127803662 127803872 + 14.3 0.000 intron (NM_001018078, intron 1 of 14) intron (NM_001018078, intron 1 of 14) 586 NM_001018078 2356 Hs.335084 NM_004957 ENSG00000136877 FPGS - folylpolyglutamate synthase protein-coding chr6-1190 chr6 152091945 152092155 + 14.3 0.000 intron (NM_001328100, intron 6 of 6) intron (NM_001328100, intron 6 of 6) 76237 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr17-1328 chr17 8158717 8158927 + 14.3 0.000 TTS (NM_001330125) TTS (NM_001330125) 4054 NM_001330125 6844 Hs.25348 NM_014232 ENSG00000220205 VAMP2 SYB2|VAMP-2 vesicle associated membrane protein 2 protein-coding chr9-1671 chr9 41034825 41035035 + 14.3 0.000 intron (NR_156730, intron 6 of 6) intron (NR_156730, intron 6 of 6) 39695 NR_002836 595135 Hs.571593 NR_002836 ENSG00000277778 PGM5P2 - phosphoglucomutase 5 pseudogene 2 pseudo chr4-1674 chr4 143286156 143286366 + 14.3 0.000 Intergenic Intergenic -50615 NM_002039 2549 Hs.80720 NM_002039 ENSG00000109458 GAB1 DFNB26 GRB2 associated binding protein 1 protein-coding chr15-1483 chr15 39595502 39595712 + 14.3 0.000 3' UTR (NM_003246, exon 22 of 22) 3' UTR (NM_003246, exon 22 of 22) 14528 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr14-829 chr14 30679568 30679778 + 14.3 0.000 intron (NM_016106, intron 14 of 24) Tigger13a|DNA|TcMar-Tigger 57354 NM_001257376 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr4-2095 chr4 40887854 40888064 + 14.3 0.000 intron (NM_173075, intron 11 of 16) intron (NM_173075, intron 11 of 16) -30767 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr1-4107 chr1 234437781 234437991 + 14.3 0.000 intron (NM_005646, intron 12 of 29) L1MEf|LINE|L1 41293 NM_005646 6894 Hs.498115 NM_005646 ENSG00000059588 TARBP1 TRM3|TRMT3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding chr1-2122 chr1 205889862 205890072 + 14.3 0.000 promoter-TSS (NR_046098) promoter-TSS (NR_046098) -53 NR_046098 284581 NR_046097 LOC284581 - uncharacterized LOC284581 ncRNA chr1-2840 chr1 94863348 94863558 + 14.3 0.000 intron (NM_001258340, intron 10 of 14) intron (NM_001258340, intron 10 of 14) 38960 NM_001350223 126969 Hs.483423 NM_152369 ENSG00000143036 SLC44A3 CTL3 solute carrier family 44 member 3 protein-coding chr11-2427 chr11 18744677 18744887 + 14.3 0.000 intron (NM_001278236, intron 3 of 14) MIR3|SINE|MIR -18594 NM_173588 283284 Hs.434152 NM_173588 ENSG00000179057 IGSF22 IGFN2 immunoglobulin superfamily member 22 protein-coding chr3-1342 chr3 124886157 124886367 + 14.3 0.000 intron (NM_001354766, intron 1 of 13) CpG 1103 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr4-807 chr4 83010652 83010862 + 14.3 0.000 promoter-TSS (NM_194282) promoter-TSS (NM_194282) 66 NM_194282 132660 Hs.96952 NM_194282 ENSG00000189308 LIN54 CXCDC1|JC8.6|MIP120|TCX1 lin-54 DREAM MuvB core complex component protein-coding chr5-692 chr5 14817139 14817349 + 14.3 0.000 intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 8768 NR_039780 100616271 NR_039780 ENSG00000264792 MIR4637 - microRNA 4637 ncRNA chr6-1376 chr6 83418029 83418239 + 14.3 0.000 intron (NM_002395, intron 1 of 13) intron (NM_002395, intron 1 of 13) 12917 NM_002395 4199 Hs.21160 NM_002395 ENSG00000065833 ME1 HUMNDME|MES malic enzyme 1 protein-coding chr2-1761 chr2 121502261 121502471 + 14.3 0.000 intron (NM_015282, intron 8 of 38) L2a|LINE|L2 -28514 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr4-675 chr4 108650352 108650562 + 14.3 0.000 promoter-TSS (NM_001267818) promoter-TSS (NM_001267818) -128 NM_001267817 58505 Hs.445803 NM_021227 ENSG00000198856 OSTC DC2 oligosaccharyltransferase complex non-catalytic subunit protein-coding chr17-2643 chr17 15920874 15921084 + 14.3 0.000 Intergenic Intergenic -23938 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr6-2683 chr6 18434414 18434624 + 14.3 0.000 intron (NM_182757, intron 3 of 7) intron (NM_182757, intron 3 of 7) 47169 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr1-4292 chr1 19860550 19860760 + 14.3 0.000 Intergenic Intergenic -21740 NM_015207 23252 Hs.374987 NM_015207 ENSG00000169914 OTUD3 DUBA4 OTU deubiquitinase 3 protein-coding chr11-1832 chr11 66317984 66318194 + 14.3 0.000 Intergenic Intergenic -1045 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding chr17-1427 chr17 4142967 4143177 + 14.3 0.000 promoter-TSS (NM_015113) promoter-TSS (NM_015113) -42 NM_015113 23140 Hs.277624 NM_015113 ENSG00000074755 ZZEF1 ZZZ4 zinc finger ZZ-type and EF-hand domain containing 1 protein-coding chr17-2481 chr17 75249338 75249548 + 14.3 0.000 intron (NM_001291641, intron 1 of 17) intron (NM_001291641, intron 1 of 17) 12163 NM_014001 23163 Hs.87726 NM_014001 ENSG00000125447 GGA3 - golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding chr3-2265 chr3 57805686 57805896 + 14.3 0.000 intron (NM_001304420, intron 1 of 21) L2c|LINE|L2 48535 NM_007159 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr22-723 chr22 32475336 32475546 + 14.3 0.000 intron (NM_001033024, intron 1 of 8) intron (NM_001033024, intron 1 of 8) 204 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr5-3248 chr5 97550175 97550385 + 14.3 0.000 intron (NR_105028, intron 2 of 3) intron (NR_105028, intron 2 of 3) 45584 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr17-1409 chr17 68456721 68456931 + 14.3 0.000 intron (NM_017983, intron 1 of 12) intron (NM_017983, intron 1 of 12) 670 NM_017983 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding chr19-1869 chr19 18647857 18648067 + 14.3 0.000 intron (NM_001345983, intron 1 of 2) intron (NM_001345983, intron 1 of 2) 3324 NM_001345983 55295 Hs.250632 NM_018316 ENSG00000167487 KLHL26 - kelch like family member 26 protein-coding chr16-1442 chr16 68375342 68375552 + 14.3 0.000 intron (NM_018667, intron 2 of 8) intron (NM_018667, intron 2 of 8) 64333 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr15-1157 chr15 71559013 71559223 + 14.3 0.000 intron (NM_001286429, intron 1 of 11) L1ME3F|LINE|L1 11882 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr4-1441 chr4 115154815 115155025 + 14.3 0.000 Intergenic MER20|DNA|hAT-Charlie -41300 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr22-1051 chr22 42940239 42940449 + 14.3 0.000 intron (NM_001184970, intron 1 of 10) L2c|LINE|L2 6697 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr10-4454 chr10 73083070 73083280 + 14.3 0.000 intron (NM_001142595, intron 1 of 15) intron (NM_001142595, intron 1 of 15) 13799 NM_001142596 5033 Hs.500047 NM_000917 ENSG00000122884 P4HA1 P4HA prolyl 4-hydroxylase subunit alpha 1 protein-coding chr11-3278 chr11 79092884 79093094 + 14.3 0.000 intron (NM_001098816, intron 4 of 33) MIRc|SINE|MIR 309120 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr1-1441 chr1 178094027 178094237 + 14.3 0.000 promoter-TSS (NR_027982) promoter-TSS (NR_027982) 28 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr7-2720 chr7 33980188 33980398 + 14.3 0.000 intron (NM_133468, intron 7 of 15) intron (NM_133468, intron 7 of 15) 74754 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr12-905 chr12 120649057 120649267 + 14.3 0.000 intron (NM_001033677, intron 1 of 5) intron (NM_001033677, intron 1 of 5) -1115 NM_031205 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr7-1658 chr7 77455358 77455568 + 14.3 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -39114 NM_001350897 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr3-1764 chr3 195013065 195013275 + 14.3 0.000 Intergenic Intergenic -81418 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr10-1078 chr10 5597204 5597414 + 14.3 0.000 Intergenic Intergenic -1191 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr4-1158 chr4 122330204 122330414 + 14.3 0.000 intron (NM_015312, intron 64 of 83) L1MB1|LINE|L1 -48702 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding chr15-1314 chr15 68643315 68643525 + 14.3 0.000 intron (NM_001324015, intron 1 of 11) intron (NM_001324015, intron 1 of 11) 1917 NM_001324015 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr2-3319 chr2 149065321 149065531 + 14.3 0.000 intron (NM_001317006, intron 1 of 4) intron (NM_001317006, intron 1 of 4) -12096 NM_001317004 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr14-355 chr14 33950952 33951162 + 14.3 0.000 promoter-TSS (NM_022073) promoter-TSS (NM_022073) 17 NM_001308103 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr18-216 chr18 3129375 3129585 + 14.3 0.000 exon (NM_003803, exon 18 of 38) exon (NM_003803, exon 18 of 38) 90488 NM_019856 8736 Hs.464469 NM_003803 ENSG00000101605 MYOM1 SKELEMIN myomesin 1 protein-coding chr12-1938 chr12 105171417 105171627 + 14.3 0.000 Intergenic Intergenic 61883 NM_001251905 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr3-2187 chr3 197907225 197907435 + 14.3 0.000 intron (NM_001323029, intron 9 of 11) ERVL-E-int|LTR|ERVL 42595 NM_001134435 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding chr13-420 chr13 24500946 24501156 + 14.3 0.000 intron (NM_006437, intron 3 of 33) intron (NM_006437, intron 3 of 33) 11727 NM_006437 143 Hs.744855 NM_006437 ENSG00000102699 PARP4 ADPRTL1|ARTD4|PARP-4|PARPL|PH5P|VAULT3|VPARP|VWA5C|p193 poly(ADP-ribose) polymerase family member 4 protein-coding chr1-3789 chr1 9659497 9659707 + 14.3 0.000 intron (NM_005026, intron 1 of 23) L1MB3|LINE|L1 -5016 NR_027045 644997 Hs.568595 NM_001045478 ENSG00000179840 PIK3CD-AS1 C1orf200 PIK3CD antisense RNA 1 ncRNA chr9-3304 chr9 80392285 80392495 + 14.3 0.000 Intergenic THE1C|LTR|ERVL-MaLR 417367 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr2-1439 chr2 231786339 231786549 + 14.3 0.000 promoter-TSS (NM_001282950) promoter-TSS (NM_001282950) -1 NM_001282950 64708 Hs.335061 NM_022730 ENSG00000144524 COPS7B CSN7B|SGN7b COP9 signalosome subunit 7B protein-coding chr10-1622 chr10 72729630 72729840 + 14.3 0.000 intron (NR_073062, intron 3 of 9) MER20|DNA|hAT-Charlie 8706 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr1-4623 chr1 157040832 157041042 + 14.3 0.000 intron (NM_014784, intron 1 of 39) MIRc|SINE|MIR 4805 NM_014784 9826 Hs.516954 NM_014784 ENSG00000132694 ARHGEF11 GTRAP48|PDZ-RHOGEF Rho guanine nucleotide exchange factor 11 protein-coding chr21-388 chr21 33383185 33383395 + 14.3 0.000 Intergenic MER81|DNA|hAT-Blackjack -19606 NM_001329128 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr2-2943 chr2 11250823 11251033 + 14.3 0.000 intron (NM_001321643, intron 3 of 32) L2a|LINE|L2 93708 NM_004850 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chrX-257 chrX 16712657 16712867 + 14.3 0.000 promoter-TSS (NM_175859) promoter-TSS (NM_175859) -93 NM_175859 56474 Hs.227049 NM_019857 ENSG00000047230 CTPS2 - CTP synthase 2 protein-coding chr9-1007 chr9 93134374 93134584 + 14.3 0.000 promoter-TSS (NM_004148) promoter-TSS (NM_004148) -228 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr3-2130 chr3 73624838 73625048 + 14.3 0.000 promoter-TSS (NM_015009) promoter-TSS (NM_015009) -2 NM_015009 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr6-1284 chr6 112640932 112641142 + 14.3 0.000 Intergenic Intergenic 293707 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr10-1380 chr10 31147299 31147509 + 14.3 0.000 Intergenic Intergenic -40479 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chrX-1593 chrX 87174117 87174327 + 14.3 0.000 Intergenic Intergenic -343580 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr12-1617 chr12 90816851 90817061 + 14.3 0.000 Intergenic Plat_L3|LINE|CR1 -101067 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr7-2788 chr7 77251385 77251595 + 14.3 0.000 intron (NM_020879, intron 4 of 18) L1MCa|LINE|L1 -51671 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding chr9-1853 chr9 27089085 27089295 + 14.3 0.000 Intergenic Intergenic -19951 NM_001290078 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr14-1194 chr14 69481889 69482099 + 14.3 0.000 Intergenic Intergenic -2734 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr1-3904 chr1 65881231 65881441 + 14.3 0.000 intron (NM_002600, intron 1 of 16) LTR16A|LTR|ERVL -31909 NM_001297441 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr14-583 chr14 51607887 51608097 + 14.3 0.000 intron (NM_001042481, intron 2 of 14) intron (NM_001042481, intron 2 of 14) -8040 NR_051990 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr14-513 chr14 99522479 99522689 + 14.3 0.000 intron (NM_001144995, intron 2 of 5) intron (NM_001144995, intron 2 of 5) 41175 NM_001099402 8812 Hs.510409 NM_003858 ENSG00000090061 CCNK CPR4|IDDHDF cyclin K protein-coding chr11-1378 chr11 102267744 102267954 + 14.3 0.000 Intergenic Intergenic -49635 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr3-3149 chr3 168047274 168047484 + 14.3 0.000 intron (NM_001308155, intron 2 of 14) intron (NM_001308155, intron 2 of 14) 48545 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr1-4083 chr1 223727595 223727805 + 14.3 0.000 intron (NM_001146068, intron 2 of 20) intron (NM_001146068, intron 2 of 20) 15161 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr2-3772 chr2 9729410 9729620 + 14.3 0.000 Intergenic Intergenic -98518 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr2-2269 chr2 12819067 12819277 + 14.3 0.000 Intergenic Intergenic 81805 NR_036072 100422986 NR_036072 ENSG00000264370 MIR3125 mir-3125 microRNA 3125 ncRNA chr17-3073 chr17 81941074 81941284 + 14.3 0.000 exon (NM_001145113, exon 3 of 3) exon (NM_001145113, exon 3 of 3) -3851 NM_001330523 5831 Hs.163451 NM_006907 ENSG00000183010 PYCR1 ARCL2B|ARCL3B|P5C|P5CR|PIG45|PP222|PRO3|PYCR pyrroline-5-carboxylate reductase 1 protein-coding chr14-466 chr14 70907452 70907662 + 14.3 0.000 promoter-TSS (NM_001308160) promoter-TSS (NM_001308160) 98 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr8-1912 chr8 37144816 37145026 + 14.3 0.000 Intergenic L2b|LINE|L2 348992 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr16-1461 chr16 87688073 87688283 + 14.3 0.000 intron (NM_020655, intron 3 of 4) intron (NM_020655, intron 3 of 4) 77808 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr9-3771 chr9 125651533 125651743 + 14.3 0.000 intron (NM_001006619, intron 4 of 10) intron (NM_001006619, intron 4 of 10) 55570 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr9-1146 chr9 137110684 137110894 + 14.3 0.000 intron (NM_013379, intron 12 of 12) CpG 3944 NM_013379 29952 Hs.37916 NM_013379 ENSG00000176978 DPP7 DPP2|DPPII|QPP dipeptidyl peptidase 7 protein-coding chr6-1887 chr6 142846943 142847153 + 14.3 0.000 intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 98128 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr12-1639 chr12 1516999 1517209 + 14.3 0.000 Intergenic L1MB3|LINE|L1 15088 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr2-1756 chr2 109130432 109130642 + 14.3 0.000 promoter-TSS (NR_029193) promoter-TSS (NR_029193) -418 NR_029193 100287216 Hs.171244 NR_029193 SH3RF3-AS1 - SH3RF3 antisense RNA 1 ncRNA chr8-1097 chr8 29240596 29240806 + 14.3 0.000 intron (NM_015254, intron 2 of 39) intron (NM_015254, intron 2 of 39) 22369 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr6-500 chr6 118664406 118664616 + 14.3 0.000 intron (NM_001178035, intron 1 of 13) intron (NM_001178035, intron 1 of 13) -12920 NM_001042475 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr12-1158 chr12 6195745 6195955 + 14.3 0.000 Intergenic Intergenic -4096 NM_001330312 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr3-2165 chr3 150114964 150115174 + 14.3 0.000 intron (NR_136187, intron 1 of 2) intron (NR_136187, intron 1 of 2) 18626 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr3-508 chr3 135965673 135965883 + 14.3 0.000 promoter-TSS (NM_001190447) promoter-TSS (NM_001190447) 50 NM_001190447 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr4-1536 chr4 148238103 148238313 + 14.3 0.000 intron (NM_000901, intron 3 of 8) intron (NM_000901, intron 3 of 8) 204206 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr9-1859 chr9 36543993 36544203 + 14.3 0.000 Intergenic Intergenic -28764 NM_001256691 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr13-522 chr13 91347616 91347826 + 14.3 0.000 promoter-TSS (NR_027349) promoter-TSS (NR_027349) -99 NR_027349 407975 Hs.24115 NR_027349 ENSG00000215417 MIR17HG C13orf25|FGLDS2|LINC00048|MIHG1|MIRH1|MIRHG1|NCRNA00048|miR-17-92 miR-17-92a-1 cluster host gene ncRNA chr7-2504 chr7 31634009 31634219 + 14.3 0.000 intron (NM_194300, intron 8 of 12) intron (NM_194300, intron 8 of 12) -52903 NM_001145123 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr2-7703 chr2 32227810 32228020 + 14.3 0.000 intron (NM_001199138, intron 8 of 8) intron (NM_001199138, intron 8 of 8) 36971 NM_001199138 58484 Hs.574741 NM_021209 ENSG00000091106 NLRC4 AIFEC|CARD12|CLAN|CLAN1|CLANA|CLANB|CLANC|CLAND|CLR2.1|FCAS4|IPAF NLR family CARD domain containing 4 protein-coding chr7-891 chr7 4683580 4683790 + 14.3 0.000 intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) 1390 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr1-1629 chr1 156160884 156161094 + 14.3 0.000 exon (NM_001193301, exon 8 of 15) exon (NM_001193301, exon 8 of 15) 6441 NM_001370567 64218 Hs.408846 NM_022367 ENSG00000196189 SEMA4A CORD10|RP35|SEMAB|SEMB semaphorin 4A protein-coding chr1-3049 chr1 8015114 8015324 + 14.3 0.000 intron (NM_018948, intron 3 of 3) intron (NM_018948, intron 3 of 3) 11090 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr21-430 chr21 34983109 34983319 + 14.3 0.000 intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) 56212 NR_026812 80215 Hs.672131 NM_025143 RUNX1-IT1 C21orf96 RUNX1 intronic transcript 1 ncRNA chr12-2902 chr12 50572495 50572705 + 14.3 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 67615 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr5-3249 chr5 97583865 97584075 + 14.3 0.000 intron (NR_105028, intron 2 of 3) MER58A|DNA|hAT-Charlie 79274 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr8-1889 chr8 23307100 23307310 + 14.3 0.000 intron (NM_002318, intron 10 of 13) intron (NM_002318, intron 10 of 13) 19097 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr7-839 chr7 1297080 1297290 + 14.3 0.000 Intergenic Intergenic 64313 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr10-3113 chr10 31656863 31657073 + 14.3 0.000 Intergenic L1ME3Cz|LINE|L1 251958 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr14-3085 chr14 64068182 64068392 + 14.3 0.000 intron (NM_015180, intron 51 of 114) L1ME1|LINE|L1 26838 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA chr3-1518 chr3 155995751 155995961 + 14.3 0.000 Intergenic MER90|LTR|ERV1 -124692 NM_001308217 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr16-593 chr16 1326224 1326434 + 14.3 0.000 3' UTR (NM_003345, exon 7 of 7) 3' UTR (NM_003345, exon 7 of 7) -7316 NM_001199098 8938 Hs.458427 NM_003933 ENSG00000007516 BAIAP3 BAP3 BAI1 associated protein 3 protein-coding chr22-1290 chr22 38851611 38851821 + 14.3 0.000 Intergenic MIRb|SINE|MIR -7688 NM_014293 23467 Hs.91622 NM_014293 ENSG00000221890 NPTXR NPR neuronal pentraxin receptor protein-coding chr10-2078 chr10 109167101 109167311 + 14.3 0.000 Intergenic Intergenic 756040 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr19-860 chr19 16542290 16542500 + 14.3 0.000 promoter-TSS (NM_006387) promoter-TSS (NM_006387) 42 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr5-1317 chr5 95794070 95794280 + 14.3 0.000 3' UTR (NM_014899, exon 12 of 12) 3' UTR (NM_014899, exon 12 of 12) 28551 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr8-1378 chr8 144577279 144577489 + 14.3 0.000 intron (NM_025251, intron 2 of 10) L1M3|LINE|L1 28311 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr7-1196 chr7 47979392 47979602 + 14.3 0.000 non-coding (NR_037917, exon 1 of 9) non-coding (NR_037917, exon 1 of 9) 118 NR_037917 3364 Hs.152983 NM_004507 ENSG00000136273 HUS1 hHUS1 HUS1 checkpoint clamp component protein-coding chr11-1972 chr11 12112576 12112786 + 14.3 0.000 intron (NM_001346294, intron 1 of 25) intron (NM_001346294, intron 1 of 25) 2091 NM_001346299 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr5-1817 chr5 79011616 79011826 + 14.3 0.000 intron (NM_013391, intron 14 of 15) MSTA|LTR|ERVL-MaLR -25763 NM_198709 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr17-3949 chr17 62348643 62348853 + 14.3 0.000 Intergenic L1PB1|LINE|L1 -21470 NM_001144933 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding chr10-1574 chr10 4541259 4541469 + 14.3 0.000 Intergenic Intergenic -114792 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA chr17-2900 chr17 41538846 41539056 + 14.3 0.000 Intergenic Intergenic -10643 NM_002276 3880 Hs.654568 NM_002276 ENSG00000171345 KRT19 CK19|K19|K1CS keratin 19 protein-coding chr13-965 chr13 113411198 113411408 + 14.3 0.000 intron (NM_001304433, intron 1 of 1) intron (NM_001304433, intron 1 of 1) 3090 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr6-1135 chr6 154292951 154293161 + 14.3 0.000 intron (NM_015553, intron 1 of 11) intron (NM_015553, intron 1 of 11) 37025 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr8-1679 chr8 42468892 42469102 + 14.3 0.000 intron (NM_006749, intron 2 of 10) intron (NM_006749, intron 2 of 10) 32234 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr18-416 chr18 57693992 57694202 + 14.3 0.000 intron (NM_005603, intron 11 of 27) MER68|LTR|ERVL 63766 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr11-3061 chr11 10407209 10407419 + 14.3 0.000 intron (NR_103765, intron 2 of 3) L1ME1|LINE|L1 -43007 NM_001172431 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr11-2704 chr11 119432543 119432753 + 14.3 0.000 intron (NR_034160, intron 2 of 3) intron (NR_034160, intron 2 of 3) -7663 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr9-1600 chr9 115006806 115007016 + 14.1 0.000 Intergenic Intergenic -76316 NM_001244 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr2-1080 chr2 95345538 95345748 + 14.1 0.000 intron (NM_013434, intron 2 of 8) CpG -1015 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr12-1956 chr12 111937501 111937711 + 14.1 0.000 intron (NM_001193453, intron 5 of 9) intron (NM_001193453, intron 5 of 9) 38543 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo chr2-2226 chr2 174264046 174264256 + 14.1 0.000 Intergenic MER44D|DNA|TcMar-Tigger -15619 NM_001328688 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr2-6252 chr2 42148017 42148227 + 14.1 0.000 intron (NR_110584, intron 2 of 3) intron (NR_110584, intron 2 of 3) -21231 NM_019063 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr10-4420 chr10 66836154 66836364 + 14.1 0.000 intron (NM_001127384, intron 7 of 17) intron (NM_001127384, intron 7 of 17) -89777 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr15-1341 chr15 41441613 41441823 + 14.1 0.000 intron (NM_015138, intron 2 of 17) intron (NM_015138, intron 2 of 17) 24614 NM_015138 23168 Hs.511096 NM_015138 ENSG00000137815 RTF1 GTL7|KIAA0252 RTF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr3-539 chr3 48301448 48301658 + 14.1 0.000 promoter-TSS (NM_001308427) promoter-TSS (NM_001308427) 132 NM_001308426 10201 Hs.465558 NM_005793 ENSG00000172113 NME6 IPIA-ALPHA|NDK 6|NM23-H6 NME/NM23 nucleoside diphosphate kinase 6 protein-coding chr14-1111 chr14 74517004 74517214 + 14.1 0.000 intron (NM_000428, intron 17 of 35) intron (NM_000428, intron 17 of 35) 23344 NM_194279 122961 Hs.291079 NM_194279 ENSG00000165898 ISCA2 HBLD1|ISA2|MMDS4|c14_5557 iron-sulfur cluster assembly 2 protein-coding chr10-2271 chr10 132238886 132239096 + 14.1 0.000 intron (NM_001318878, intron 2 of 11) intron (NM_001318878, intron 2 of 11) 10117 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr10-5505 chr10 82408890 82409100 + 14.1 0.000 intron (NR_163253, intron 3 of 10) intron (NR_163253, intron 3 of 10) -176075 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr21-222 chr21 45950720 45950930 + 14.1 0.000 Intergenic Intergenic -22145 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr15-2528 chr15 41967626 41967836 + 14.1 0.000 intron (NM_139265, intron 1 of 5) L3|LINE|CR1 4826 NM_139265 30844 Hs.143703 NM_139265 ENSG00000103966 EHD4 PAST4 EH domain containing 4 protein-coding chr21-201 chr21 43939065 43939275 + 14.1 0.000 intron (NM_001037553, intron 1 of 8) intron (NM_001037553, intron 1 of 8) 13772 NM_001037553 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr9-2053 chr9 18363546 18363756 + 14.1 0.000 Intergenic Intergenic -110502 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr3-1712 chr3 53794821 53795031 + 14.1 0.000 intron (NM_001128840, intron 40 of 47) intron (NM_001128840, intron 40 of 47) 51493 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr17-2782 chr17 3655670 3655880 + 14.1 0.000 intron (NM_001031681, intron 7 of 12) intron (NM_001031681, intron 7 of 12) 12803 NM_014604 30851 Hs.12956 NM_014604 ENSG00000213977 TAX1BP3 TIP-1|TIP1 Tax1 binding protein 3 protein-coding chr15-1721 chr15 97909413 97909623 + 14.1 0.000 Intergenic Intergenic -35089 NR_024172 91948 Hs.130423 NR_024172 ENSG00000251209 LINC00923 - long intergenic non-protein coding RNA 923 ncRNA chr3-5049 chr3 38682662 38682872 + 14.1 0.000 Intergenic Intergenic -33080 NM_001354701 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr20-320 chr20 44210841 44211051 + 14.1 0.000 promoter-TSS (NR_038339) promoter-TSS (NR_038339) -14 NR_038339 100505783 Hs.159049 NR_038337 ENSG00000223891 OSER1-DT OSER1-AS1 OSER1 divergent transcript ncRNA chr3-4321 chr3 172606104 172606314 + 14.1 0.000 Intergenic Intergenic -10602 NR_146714 105374219 Hs.186269 NR_146714 ENSG00000223387 LINC02068 - long intergenic non-protein coding RNA 2068 ncRNA chr8-1520 chr8 81154120 81154330 + 14.1 0.000 Intergenic Intergenic -42157 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr13-671 chr13 103009638 103009848 + 14.1 0.000 Intergenic Intergenic 56674 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr6-1212 chr6 53192933 53193143 + 14.1 0.000 Intergenic Intergenic -44197 NM_003643 8521 Hs.23589 NM_003643 ENSG00000137270 GCM1 GCMA|hGCMa glial cells missing transcription factor 1 protein-coding chr17-2091 chr17 81469310 81469520 + 14.1 0.000 Intergenic Intergenic -18227 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr20-903 chr20 46239204 46239414 + 14.1 0.000 intron (NM_021248, intron 3 of 11) intron (NM_021248, intron 3 of 11) 69189 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr1-6596 chr1 37364505 37364715 + 14.1 0.000 Intergenic Intergenic 109833 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr3-999 chr3 45972780 45972990 + 14.1 0.000 intron (NM_024513, intron 6 of 17) intron (NM_024513, intron 6 of 17) 22939 NM_024513 79443 Hs.200227 NM_024513 ENSG00000163820 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding chr3-3878 chr3 39433747 39433957 + 14.1 0.000 Intergenic Intergenic 22798 NR_002324 6044 Hs.449909 NR_002324 ENSG00000202363 SNORA62 E2|E2-1|RNE2|RNU108 small nucleolar RNA, H/ACA box 62 snoRNA chr6-921 chr6 5219243 5219453 + 14.1 0.000 intron (NM_020408, intron 1 of 2) intron (NM_020408, intron 1 of 2) 41602 NR_134856 57128 Hs.387755 NM_020408 ENSG00000214113 LYRM4 C6orf149|CGI-203|COXPD19|ISD11 LYR motif containing 4 protein-coding chr6-2636 chr6 158405581 158405791 + 14.1 0.000 intron (NM_020245, intron 1 of 13) LTR14B|LTR|ERVK 82704 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr6-474 chr6 36590321 36590531 + 14.1 0.000 Intergenic Intergenic -3887 NR_036610 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr11-1814 chr11 11606850 11607060 + 14.1 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 15050 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr10-1041 chr10 28566688 28566898 + 14.1 0.000 intron (NM_100486, intron 3 of 12) HAL1b|LINE|L1 33675 NM_100486 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr1-3636 chr1 53124283 53124493 + 14.1 0.000 intron (NR_109858, intron 2 of 10) MER121|DNA|hAT? 18250 NM_006671 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr10-1146 chr10 92761524 92761734 + 14.1 0.000 Intergenic L1M5|LINE|L1 -65202 NM_001013848 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr1-5275 chr1 207298697 207298907 + 14.1 0.000 Intergenic Intergenic -22876 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr15-1020 chr15 85000274 85000484 + 14.1 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 18405 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr1-2921 chr1 27528998 27529208 + 14.1 0.000 Intergenic Intergenic -38936 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr1-4069 chr1 212179758 212179968 + 14.1 0.000 Intergenic Intergenic 54873 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr1-2387 chr1 156025809 156026019 + 14.1 0.000 Intergenic Intergenic -4963 NM_003145 6746 Hs.74564 NM_003145 ENSG00000163479 SSR2 HSD25|TLAP|TRAP-BETA|TRAPB signal sequence receptor subunit 2 protein-coding chr14-987 chr14 86997422 86997632 + 14.1 0.000 Intergenic Intergenic 91749 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr10-1404 chr10 86507883 86508093 + 14.1 0.000 intron (NM_001318328, intron 2 of 18) L2|LINE|L2 13796 NM_001318328 23063 Hs.203099 NM_015045 ENSG00000062650 WAPL FOE|KIAA0261|WAPAL WAPL cohesin release factor protein-coding chr15-632 chr15 73689149 73689359 + 14.1 0.000 intron (NM_001329628, intron 1 of 7) intron (NM_001329628, intron 1 of 7) 4484 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding chr2-2164 chr2 238098561 238098771 + 14.1 0.000 non-coding (NR_037904, exon 19 of 19) non-coding (NR_037904, exon 19 of 19) -1674 NM_194312 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr1-5048 chr1 92478318 92478528 + 14.1 0.000 intron (NM_001127215, intron 6 of 6) intron (NM_001127215, intron 6 of 6) 5531 NM_001127215 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr3-1291 chr3 122890084 122890294 + 14.1 0.000 non-coding (NR_024618, exon 1 of 1) non-coding (NR_024618, exon 1 of 1) 3676 NR_024618 100129550 Hs.61558 NR_024618 ENSG00000273033 LINC02035 - long intergenic non-protein coding RNA 2035 ncRNA chr4-4924 chr4 124262279 124262489 + 14.1 0.000 Intergenic Intergenic 296050 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr17-1327 chr17 6639907 6640117 + 14.1 0.000 intron (NR_147088, intron 1 of 17) intron (NR_147088, intron 1 of 17) 699 NM_014804 9851 Hs.28070 NM_014804 ENSG00000198920 KIAA0753 MNR|OFIP KIAA0753 protein-coding chr1-4027 chr1 186812732 186812942 + 14.1 0.000 Intergenic Intergenic -16063 NM_024420 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr2-7247 chr2 228112342 228112552 + 14.1 0.000 intron (NM_030623, intron 2 of 10) intron (NM_030623, intron 2 of 10) 69198 NM_030623 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr5-1516 chr5 143650246 143650456 + 14.1 0.000 Intergenic Intergenic -29509 NR_049829 100846991 NR_049829 ENSG00000266478 MIR5197 - microRNA 5197 ncRNA chr4-2223 chr4 140937937 140938147 + 14.1 0.000 intron (NM_020724, intron 4 of 6) intron (NM_020724, intron 4 of 6) -181657 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr16-1124 chr16 30875098 30875308 + 14.1 0.000 promoter-TSS (NR_110940) promoter-TSS (NR_110940) 120 NR_039744 100616231 NR_039744 ENSG00000265991 MIR4519 - microRNA 4519 ncRNA chr4-1051 chr4 74114294 74114504 + 14.1 0.000 Intergenic Intergenic -8874 NM_001351311 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr5-3371 chr5 138767780 138767990 + 14.1 0.000 intron (NM_001323982, intron 2 of 18) intron (NM_001323982, intron 2 of 18) -13961 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr8-1869 chr8 19200929 19201139 + 14.1 0.000 intron (NR_038919, intron 3 of 4) intron (NR_038919, intron 3 of 4) 44488 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr2-4524 chr2 35933081 35933291 + 14.1 0.000 Intergenic Intergenic 422384 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr14-1722 chr14 35528757 35528967 + 14.1 0.000 Intergenic hAT-N1_Mam|DNA|hAT-Tip100? -5302 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding chr11-2463 chr11 59708601 59708811 + 14.1 0.000 Intergenic Intergenic 5139 NM_001005324 390201 Hs.589001 NM_001005324 ENSG00000172289 OR10V1 OR11-256 olfactory receptor family 10 subfamily V member 1 protein-coding chr6-2607 chr6 124963514 124963724 + 14.1 0.000 promoter-TSS (NR_026876) promoter-TSS (NR_026876) -592 NR_026876 7955 Hs.544438 NR_026876 ENSG00000236548 RNF217-AS1 STL RNF217 antisense RNA 1 (head to head) ncRNA chr12-727 chr12 52082381 52082591 + 14.1 0.000 intron (NM_001369216, intron 1 of 2) intron (NM_001369216, intron 1 of 2) -2260 NR_120439 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr2-1004 chr2 207625243 207625453 + 14.1 0.000 promoter-TSS (NM_001127395) promoter-TSS (NM_001127395) 30 NM_001127395 151194 Hs.664764 NM_145280 ENSG00000144401 METTL21A FAM119A|HCA557b|HSPA-KMT methyltransferase like 21A protein-coding chr4-1539 chr4 156538427 156538637 + 14.1 0.000 Intergenic Intergenic 433267 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr13-663 chr13 77605918 77606128 + 14.1 0.000 intron (NM_003843, intron 18 of 31) intron (NM_003843, intron 18 of 31) 528 NR_126413 104355296 Hs.667682 NR_126412 ENSG00000224347 SCEL-AS1 - SCEL antisense RNA 1 ncRNA ML143377.1-2 ML143377.1 240533 240743 + 14.1 0.000 NA NA NA NA chr5-1233 chr5 154199063 154199273 + 14.1 0.000 intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 8435 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr1-3367 chr1 110370893 110371103 + 14.1 0.000 intron (NM_001201548, intron 6 of 6) intron (NM_001201548, intron 6 of 6) 20028 NM_001201549 9122 Hs.351306 NM_004696 ENSG00000168679 SLC16A4 MCT4|MCT5 solute carrier family 16 member 4 protein-coding chr15-1220 chr15 63287339 63287549 + 14.1 0.000 exon (NM_031301, exon 4 of 6) exon (NM_031301, exon 4 of 6) 9839 NM_031301 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chr1-1354 chr1 24926707 24926917 + 14.1 0.000 intron (NM_001320672, intron 4 of 6) intron (NM_001320672, intron 4 of 6) 3464 NM_004350 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr2-4735 chr2 1546100 1546310 + 14.1 0.000 Intergenic Intergenic 131797 NM_175722 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chr9-3640 chr9 92668271 92668481 + 14.1 0.000 intron (NM_022755, intron 1 of 12) intron (NM_022755, intron 1 of 12) 1755 NM_022755 64768 Hs.459896 NM_022755 ENSG00000127080 IPPK C9orf12|INSP5K2|IP5K|IPK1|bA476B13.1 inositol-pentakisphosphate 2-kinase protein-coding chr3-947 chr3 177516195 177516405 + 14.1 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 74379 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr5-1578 chr5 172707212 172707422 + 14.1 0.000 Intergenic Intergenic 45152 NR_049799 100847029 NR_049799 ENSG00000265160 MIR5003 - microRNA 5003 ncRNA chr5-2343 chr5 72355846 72356056 + 14.1 0.000 intron (NM_001284405, intron 8 of 8) intron (NM_001284405, intron 8 of 8) 35578 NM_001284403 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr2-3884 chr2 42234262 42234472 + 14.1 0.000 intron (NM_001145076, intron 1 of 21) intron (NM_001145076, intron 1 of 21) -64136 NR_110584 102723824 Hs.639826 NR_110584 LOC102723824 - uncharacterized LOC102723824 ncRNA chr1-989 chr1 204494653 204494863 + 14.1 0.000 Intergenic CpG -4412 NM_002646 5287 Hs.497487 NM_002646 ENSG00000133056 PIK3C2B C2-PI3K phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta protein-coding chr8-1428 chr8 108083086 108083296 + 14.1 0.000 promoter-TSS (NM_001282863) promoter-TSS (NM_001282863) 12 NM_001282863 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr4-1334 chr4 155705718 155705928 + 14.1 0.000 intron (NM_001130685, intron 4 of 9) intron (NM_001130685, intron 4 of 9) 38161 NM_001130684 2982 Hs.24258 NM_000856 ENSG00000164116 GUCY1A1 GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6 guanylate cyclase 1 soluble subunit alpha 1 protein-coding chr1-3543 chr1 221487932 221488142 + 14.1 0.000 Intergenic Intergenic -151741 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr7-1820 chr7 107035475 107035685 + 14.1 0.000 Intergenic L2|LINE|L2 -9125 NM_002736 5577 Hs.433068 NM_002736 ENSG00000005249 PRKAR2B PRKAR2|RII-BETA protein kinase cAMP-dependent type II regulatory subunit beta protein-coding chr1-10147 chr1 107104904 107105114 + 14.1 0.000 Intergenic Intergenic -35079 NM_014917 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr3-637 chr3 112086329 112086539 + 14.1 0.000 promoter-TSS (NM_001171747) promoter-TSS (NM_001171747) 99 NM_001171747 79669 Hs.434247 NM_024616 ENSG00000114529 C3orf52 TTMP chromosome 3 open reading frame 52 protein-coding chr15-1168 chr15 90763184 90763394 + 14.1 0.000 intron (NM_001287246, intron 9 of 22) intron (NM_001287246, intron 9 of 22) 45943 NM_001287248 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|MGRISCE1|RECQ2|RECQL2|RECQL3 BLM RecQ like helicase protein-coding chr20-936 chr20 17576196 17576406 + 14.1 0.000 intron (NM_006870, intron 1 of 3) 7SK|RNA|RNA 6226 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr4-3090 chr4 151950311 151950521 + 14.1 0.000 Intergenic Intergenic -150337 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr9-2708 chr9 87257137 87257347 + 14.1 0.000 Intergenic Intergenic 108598 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr17-3305 chr17 61335250 61335460 + 14.1 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 32349 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr13-697 chr13 34833690 34833900 + 14.1 0.000 Intergenic Intergenic -108492 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr9-2178 chr9 130995565 130995775 + 14.1 0.000 Intergenic MIR3|SINE|MIR -13504 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr21-238 chr21 43645547 43645757 + 14.1 0.000 intron (NM_007031, intron 3 of 8) intron (NM_007031, intron 3 of 8) 13836 NM_007031 11077 Hs.406157 NM_007031 ENSG00000160207 HSF2BP - heat shock transcription factor 2 binding protein protein-coding chr6-1573 chr6 12573366 12573576 + 14.1 0.000 Intergenic Intergenic 11933 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr1-2833 chr1 63593283 63593493 + 14.1 0.000 promoter-TSS (NM_001172819) promoter-TSS (NM_001172819) -23 NM_002633 5236 Hs.1869 NM_002633 ENSG00000079739 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding chr2-1107 chr2 109495312 109495522 + 14.1 0.000 intron (NM_001099289, intron 9 of 9) intron (NM_001099289, intron 9 of 9) 118250 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr12-1502 chr12 50135516 50135726 + 14.1 0.000 intron (NR_138536, intron 8 of 10) intron (NR_138536, intron 8 of 10) 23385 NM_001257134 84987 Hs.388645 NM_032901 ENSG00000178449 COX14 C12orf62|PCAG1 cytochrome c oxidase assembly factor COX14 protein-coding chr8-1236 chr8 121600202 121600412 + 14.1 0.000 Intergenic Intergenic -39039 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr3-1395 chr3 114608364 114608574 + 14.1 0.000 intron (NM_001348803, intron 6 of 13) MER5A|DNA|hAT-Charlie 15737 NM_001164347 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr7-1205 chr7 73941938 73942148 + 14.1 0.000 Intergenic L1M4|LINE|L1 80884 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr5-489 chr5 36875855 36876065 + 14.1 0.000 promoter-TSS (NM_133433) promoter-TSS (NM_133433) 734 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA chr1-3966 chr1 151164935 151165145 + 14.1 0.000 promoter-TSS (NM_024041) promoter-TSS (NM_024041) 862 NM_212551 388695 Hs.591482 NM_212551 ENSG00000163155 LYSMD1 SB145 LysM domain containing 1 protein-coding chr6-1309 chr6 3389914 3390124 + 14.1 0.000 intron (NM_021945, intron 4 of 10) intron (NM_021945, intron 4 of 10) 54994 NM_021945 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr12-1377 chr12 64625675 64625885 + 14.1 0.000 intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) -3175 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr5-2827 chr5 41211332 41211542 + 14.1 0.000 intron (NM_001115131, intron 1 of 17) intron (NM_001115131, intron 1 of 17) 2095 NM_000065 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding chr18-909 chr18 58495327 58495537 + 14.1 0.000 intron (NM_052947, intron 12 of 12) intron (NM_052947, intron 12 of 12) -44280 NR_039899 100616357 NR_039899 ENSG00000207778 MIR3591 - microRNA 3591 ncRNA chr1-3076 chr1 21902079 21902289 + 14.1 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 35126 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr21-162 chr21 45916473 45916683 + 14.1 0.000 intron (NM_001348241, intron 11 of 16) intron (NM_001348241, intron 11 of 16) -56392 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr13-523 chr13 93226685 93226895 + 14.1 0.000 promoter-TSS (NM_005708) promoter-TSS (NM_005708) -17 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr20-528 chr20 35208317 35208527 + 14.1 0.000 intron (NM_001355008, intron 4 of 14) MIRb|SINE|MIR -18268 NM_006690 10893 Hs.715494 NM_006690 ENSG00000125966 MMP24 MMP-24|MMP25|MT-MMP 5|MT-MMP5|MT5-MMP|MT5MMP|MTMMP5 matrix metallopeptidase 24 protein-coding chr8-1132 chr8 125214257 125214467 + 14.1 0.000 intron (NM_001349486, intron 5 of 7) intron (NM_001349486, intron 5 of 7) 122502 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding chr11-3395 chr11 134086463 134086673 + 14.1 0.000 intron (NM_001205329, intron 1 of 7) MER131|DNA?|DNA? 17496 NM_032801 83700 Hs.150718 NM_032801 ENSG00000166086 JAM3 JAM-2|JAM-3|JAM-C|JAMC junctional adhesion molecule 3 protein-coding chr6-915 chr6 152146424 152146634 + 14.1 0.000 intron (NM_001347702, intron 8 of 17) MER33|DNA|hAT-Charlie 21758 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr3-6302 chr3 75124462 75124672 + 14.1 0.000 Intergenic L1PA3|LINE|L1 -89909 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr11-1512 chr11 75326171 75326381 + 14.1 0.000 intron (NM_004041, intron 1 of 15) L2b|LINE|L2 8910 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr10-1258 chr10 111856781 111856991 + 14.1 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 326879 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr10-2183 chr10 6721541 6721751 + 14.1 0.000 Intergenic Intergenic -15736 NR_138480 108570035 Hs.568834 NR_138480 LINP1 - lncRNA in non-homologous end joining pathway 1 ncRNA chr6-1684 chr6 11854866 11855076 + 14.1 0.000 Intergenic Intergenic -75924 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr6-1628 chr6 97323488 97323698 + 14.1 0.000 intron (NR_110757, intron 1 of 4) MER63A|DNA|hAT-Blackjack 18007 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr5-5160 chr5 108884745 108884955 + 14.1 0.000 intron (NR_146155, intron 8 of 19) L2|LINE|L2 -39756 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr5-1448 chr5 36877374 36877584 + 14.1 0.000 promoter-TSS (NR_046262) promoter-TSS (NR_046262) 710 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr3-2862 chr3 42161209 42161419 + 14.1 0.000 intron (NM_014965, intron 1 of 12) intron (NM_014965, intron 1 of 12) 1121 NM_014965 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr7-2193 chr7 95774188 95774398 + 14.1 0.000 intron (NM_004411, intron 1 of 16) intron (NM_004411, intron 1 of 16) 1787 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr2-3258 chr2 240569409 240569619 + 14.1 0.000 intron (NM_018226, intron 1 of 10) intron (NM_018226, intron 1 of 10) 1030 NM_018226 57140 Hs.5345 NM_018226 ENSG00000142327 RNPEPL1 - arginyl aminopeptidase like 1 protein-coding chr15-1286 chr15 101267668 101267878 + 14.1 0.000 Intergenic LTR89|LTR|ERVL? 9712 NM_203472 55829 Hs.32148 NM_018445 ENSG00000131871 SELENOS AD-015|ADO15|SBBI8|SELS|SEPS1|VIMP selenoprotein S protein-coding chr7-2094 chr7 2716818 2717028 + 14.1 0.000 TTS (NM_001284355) TTS (NM_001284355) 28721 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr1-3229 chr1 183230644 183230854 + 14.1 0.000 intron (NM_005562, intron 11 of 22) intron (NM_005562, intron 11 of 22) 44485 NM_018891 3918 Hs.591484 NM_005562 ENSG00000058085 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin subunit gamma 2 protein-coding chr11-1779 chr11 65706325 65706535 + 14.1 0.000 Intergenic LTR13|LTR|ERVK -5822 NM_006388 10524 Hs.397010 NM_006388 ENSG00000172977 KAT5 ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 lysine acetyltransferase 5 protein-coding chr1-1724 chr1 51990564 51990774 + 14.1 0.000 promoter-TSS (NM_002867) promoter-TSS (NM_002867) 31 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr20-1296 chr20 53692868 53693078 + 14.1 0.000 Intergenic Intergenic 84619 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chrX-378 chrX 150476533 150476743 + 14.1 0.000 intron (NM_005491, intron 4 of 6) intron (NM_005491, intron 4 of 6) 31184 NM_005491 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr17-4816 chr17 51879477 51879687 + 14.1 0.000 intron (NM_001082533, intron 4 of 9) HAL1ME|LINE|L1 279132 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr2-2936 chr2 9257218 9257428 + 14.1 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 50511 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr21-438 chr21 34935210 34935420 + 14.1 0.000 intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) -46616 NM_001122607 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr20-481 chr20 23920056 23920266 + 14.1 0.000 Intergenic Intergenic -40413 NM_001900 1473 Hs.121489 NM_001900 ENSG00000170367 CST5 - cystatin D protein-coding chr5-1109 chr5 9359260 9359470 + 14.1 0.000 intron (NM_003966, intron 3 of 22) MIRb|SINE|MIR -151968 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr7-3567 chr7 20615822 20616032 + 14.1 0.000 intron (NM_001163941, intron 1 of 27) intron (NM_001163941, intron 1 of 27) 260 NM_001163941 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding chr6-3150 chr6 111894147 111894357 + 14.1 0.000 Intergenic MER103C|DNA|hAT-Charlie 15145 NR_149099 105377946 NR_149099 LINC02527 - long intergenic non-protein coding RNA 2527 ncRNA chr1-5294 chr1 214640445 214640655 + 14.1 0.000 exon (NM_016343, exon 12 of 20) exon (NM_016343, exon 12 of 20) 37355 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr6-1322 chr6 14703870 14704080 + 14.1 0.000 Intergenic Intergenic -418521 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr2-2828 chr2 96159299 96159509 + 14.1 0.000 Intergenic Intergenic -13964 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr20-515 chr20 10674006 10674216 + 14.1 0.000 promoter-TSS (NM_000214) promoter-TSS (NM_000214) -112 NM_000214 182 Hs.224012 NM_000214 ENSG00000101384 JAG1 AGS|AGS1|AHD|AWS|CD339|DCHE|HJ1|JAGL1 jagged canonical Notch ligand 1 protein-coding chr4-2758 chr4 10299633 10299843 + 14.1 0.000 Intergenic HERVK9-int|LTR|ERVK 157688 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr6-2155 chr6 16505969 16506179 + 14.1 0.000 intron (NM_000332, intron 6 of 8) intron (NM_000332, intron 6 of 8) 254110 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr1-5022 chr1 77673814 77674024 + 14.1 0.000 intron (NM_001308237, intron 1 of 13) intron (NM_001308237, intron 1 of 13) 8739 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr10-2106 chr10 125091101 125091311 + 14.1 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -58336 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr8-914 chr8 125569434 125569644 + 14.1 0.000 Intergenic L2b|LINE|L2 137330 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr2-2427 chr2 39542520 39542730 + 14.1 0.000 intron (NR_037875, intron 5 of 5) intron (NR_037875, intron 5 of 5) 105209 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr2-3164 chr2 200320108 200320318 + 14.1 0.000 intron (NM_001282744, intron 1 of 12) L3b|LINE|CR1 11263 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr9-3882 chr9 133904071 133904281 + 14.1 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 88148 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr13-994 chr13 74931966 74932176 + 14.1 0.000 Intergenic L1M4b|LINE|L1 308310 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr12-1112 chr12 26648678 26648888 + 14.1 0.000 intron (NM_002223, intron 21 of 56) intron (NM_002223, intron 21 of 56) 184411 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr11-4476 chr11 107664612 107664822 + 14.1 0.000 intron (NM_001308018, intron 12 of 12) intron (NM_001308018, intron 12 of 12) 47339 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr4-1628 chr4 74395727 74395937 + 14.1 0.000 Intergenic Intergenic 30687 NM_001432 2069 Hs.115263 NM_001432 ENSG00000124882 EREG EPR|ER|Ep epiregulin protein-coding chr4-580 chr4 20369109 20369319 + 14.1 0.000 intron (NM_001289135, intron 4 of 35) LTR81A|LTR|Gypsy -22975 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr18-549 chr18 51236293 51236503 + 14.1 0.000 Intergenic Intergenic -38717 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr6-2196 chr6 37144450 37144660 + 14.1 0.000 Intergenic Intergenic -25597 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr1-1412 chr1 1167251 1167461 + 14.1 0.000 promoter-TSS (NR_029834) promoter-TSS (NR_029834) 252 NR_029639 406984 NR_029639 ENSG00000207730 MIR200B MIRN200B|mir-200b microRNA 200b ncRNA chr12-1974 chr12 122876753 122876963 + 14.1 0.000 intron (NM_024667, intron 1 of 3) (CAGAGG)n|Simple_repeat|Simple_repeat 19266 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr19-5490 chr19 42712885 42713095 + 14.1 0.000 Intergenic MER11D|LTR|ERVK 27491 NM_021016 5671 Hs.654413 NM_021016 ENSG00000221826 PSG3 - pregnancy specific beta-1-glycoprotein 3 protein-coding chr17-1462 chr17 50547083 50547293 + 14.1 0.000 promoter-TSS (NM_001258373) promoter-TSS (NM_001258373) 14 NM_022827 64847 Hs.103147 NM_022827 ENSG00000006282 SPATA20 HEL-S-98|SSP411|Tisp78 spermatogenesis associated 20 protein-coding chr7-3499 chr7 3958573 3958783 + 14.1 0.000 intron (NM_152744, intron 7 of 44) intron (NM_152744, intron 7 of 44) -171007 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr12-1046 chr12 83827355 83827565 + 14.1 0.000 Intergenic L1PB3|LINE|L1 1085339 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr3-2517 chr3 11145847 11146057 + 14.1 0.000 intron (NM_001098213, intron 1 of 1) L1ME3|LINE|L1 -8541 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr3-2856 chr3 36677403 36677613 + 14.1 0.000 Intergenic L1M3c|LINE|L1 62353 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr3-5385 chr3 154008699 154008909 + 14.1 0.000 Intergenic L1MA2|LINE|L1 -112199 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr21-364 chr21 40255107 40255317 + 14.1 0.000 intron (NR_073202, intron 11 of 32) L2b|LINE|L2 -42781 NR_039917 100616148 NR_039917 ENSG00000263973 MIR4760 - microRNA 4760 ncRNA chr3-1966 chr3 101936708 101936918 + 14.1 0.000 Intergenic Intergenic -4046 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr3-6369 chr3 87815047 87815257 + 14.1 0.000 intron (NM_001322208, intron 1 of 2) intron (NM_001322208, intron 1 of 2) 22446 NM_001322209 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr9-1935 chr9 16864548 16864758 + 14.1 0.000 intron (NM_001317940, intron 1 of 5) intron (NM_001317940, intron 1 of 5) 6017 NM_001317940 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr15-1569 chr15 71707639 71707849 + 14.1 0.000 intron (NM_001286429, intron 2 of 11) intron (NM_001286429, intron 2 of 11) -16205 NR_120346 101929173 Hs.680593 NR_120346 THSD4-AS2 - THSD4 antisense RNA 2 ncRNA chr8-1314 chr8 130096649 130096859 + 14.1 0.000 intron (NM_018482, intron 24 of 29) intron (NM_018482, intron 24 of 29) -11986 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr12-3270 chr12 68358799 68359009 + 14.1 0.000 Intergenic Intergenic -26490 NM_001354972 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr17-2440 chr17 17120436 17120646 + 14.1 0.000 intron (NM_201274, intron 3 of 23) intron (NM_201274, intron 3 of 23) 77781 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr1-3604 chr1 26209878 26210088 + 14.1 0.000 Intergenic Intergenic -15337 NR_110698 101928303 Hs.375067 NR_110698 ENSG00000236155 LOC101928303 - uncharacterized LOC101928303 ncRNA chr20-786 chr20 51366040 51366250 + 14.1 0.000 Intergenic Intergenic 86832 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chrX-1264 chrX 105168563 105168773 + 14.1 0.000 intron (NM_017416, intron 2 of 10) MLT2B4|LTR|ERVL 52025 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr11-700 chr11 64701950 64702160 + 14.1 0.000 intron (NM_015080, intron 2 of 22) SVA_D|Retroposon|SVA 21133 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr7-2323 chr7 115870058 115870268 + 14.1 0.000 Intergenic Intergenic 98150 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr11-1064 chr11 66069487 66069697 + 14.1 0.000 promoter-TSS (NM_018026) promoter-TSS (NM_018026) -680 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr4-1689 chr4 154822970 154823180 + 14.1 0.000 intron (NM_001277171, intron 5 of 5) L1MB7|LINE|L1 41570 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr7-1847 chr7 152434673 152434883 + 14.1 0.000 intron (NM_170606, intron 1 of 58) intron (NM_170606, intron 1 of 58) 1225 NM_170606 58508 Hs.647120 NM_021230 ENSG00000055609 KMT2C HALR|KLEFS2|MLL3 lysine methyltransferase 2C protein-coding chr1-6093 chr1 117821941 117822151 + 14.1 0.000 Intergenic MER5A|DNA|hAT-Charlie 107575 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr3-1313 chr3 12642765 12642975 + 14.1 0.000 intron (NM_001354691, intron 1 of 16) AluJb|SINE|Alu 20638 NM_001354690 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr11-2018 chr11 64153294 64153504 + 14.1 0.000 intron (NM_014067, intron 1 of 10) intron (NM_014067, intron 1 of 10) 12714 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 mono-ADP ribosylhydrolase 1 protein-coding chrX-396 chrX 18994912 18995122 + 14.1 0.000 exon (NM_001184837, exon 26 of 27) exon (NM_001184837, exon 26 of 27) -10903 NM_000292 5256 Hs.54941 NM_000292 ENSG00000044446 PHKA2 GSD9A|PHK|PYK|PYKL|XLG|XLG2 phosphorylase kinase regulatory subunit alpha 2 protein-coding chr5-3091 chr5 39395246 39395456 + 14.1 0.000 intron (NM_001343, intron 1 of 14) intron (NM_001343, intron 1 of 14) 29629 NM_001343 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB adaptor protein 2 protein-coding chr4-1460 chr4 154989740 154989950 + 14.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 208340 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr3-2404 chr3 189233250 189233460 + 14.1 0.000 intron (NM_198485, intron 3 of 5) intron (NM_198485, intron 3 of 5) 7239 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr2-4048 chr2 111746909 111747119 + 14.1 0.000 Intergenic Intergenic 24120 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr19-2144 chr19 4077355 4077565 + 14.1 0.000 Intergenic MER20|DNA|hAT-Charlie -10561 NM_015898 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr2-2287 chr2 45885296 45885506 + 14.1 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 233726 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr7-1177 chr7 23895802 23896012 + 14.1 0.000 Intergenic L2c|LINE|L2 185688 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr13-1170 chr13 37618642 37618852 + 14.1 0.000 Intergenic MIR|SINE|MIR -19903 NM_001286666 10631 Hs.136348 NM_006475 ENSG00000133110 POSTN OSF-2|OSF2|PDLPOSTN|PN periostin protein-coding chr7-5007 chr7 637893 638103 + 14.1 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 34600 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr3-4935 chr3 2619801 2620011 + 14.1 0.000 intron (NM_175607, intron 4 of 24) intron (NM_175607, intron 4 of 24) -272309 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr2-5843 chr2 237674261 237674471 + 14.1 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -17798 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr5-1641 chr5 159135948 159136158 + 14.1 0.000 Intergenic Intergenic 35570 NR_109890 101927740 Hs.738721 NR_109890 ENSG00000245812 LINC02202 - long intergenic non-protein coding RNA 2202 ncRNA chr9-1469 chr9 92245858 92246068 + 14.1 0.000 intron (NR_073446, intron 25 of 32) AluY|SINE|Alu 46584 NR_037424 100500918 NR_037424 ENSG00000281156 MIR3651 mir-3651 microRNA 3651 ncRNA chr10-2055 chr10 92644580 92644790 + 14.1 0.000 intron (NM_004523, intron 17 of 21) intron (NM_004523, intron 17 of 21) -45270 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr6-827 chr6 136793257 136793467 + 14.1 0.000 promoter-TSS (NM_005923) promoter-TSS (NM_005923) -885 NM_005923 4217 Hs.186486 NM_005923 ENSG00000197442 MAP3K5 ASK1|MAPKKK5|MEKK5 mitogen-activated protein kinase kinase kinase 5 protein-coding chr2-3003 chr2 46849928 46850138 + 14.1 0.000 intron (NR_024452, intron 1 of 2) intron (NR_024452, intron 1 of 2) 22169 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA chr13-587 chr13 99151580 99151790 + 14.1 0.000 Intergenic AluJo|SINE|Alu 49070 NR_036532 100289373 Hs.225914 NR_036531 ENSG00000228889 UBAC2-AS1 - UBAC2 antisense RNA 1 ncRNA chr19-1890 chr19 43525442 43525652 + 14.1 0.000 intron (NM_001320869, intron 1 of 4) intron (NM_001320869, intron 1 of 4) 1654 NM_001320867 23474 Hs.7486 NM_014297 ENSG00000105755 ETHE1 HSCO|YF13H12 ETHE1 persulfide dioxygenase protein-coding chr11-2601 chr11 130390040 130390250 + 14.1 0.000 intron (NR_148980, intron 2 of 6) intron (NR_148980, intron 2 of 6) 38464 NM_007037 11095 Hs.271605 NM_007037 ENSG00000134917 ADAMTS8 ADAM-TS8|METH2 ADAM metallopeptidase with thrombospondin type 1 motif 8 protein-coding chr4-1038 chr4 39037583 39037793 + 14.1 0.000 Intergenic Intergenic -5279 NM_024943 80008 Hs.374147 NM_024943 ENSG00000121895 TMEM156 - transmembrane protein 156 protein-coding chr1-1941 chr1 25661493 25661703 + 14.1 0.000 intron (NM_020379, intron 1 of 11) intron (NM_020379, intron 1 of 11) 44130 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr11-6496 chr11 68447993 68448203 + 14.1 0.000 intron (NM_002335, intron 22 of 22) THE1B|LTR|ERVL-MaLR -12654 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr22-894 chr22 19734394 19734604 + 14.1 0.000 Intergenic Intergenic 10956 NM_000407 2812 Hs.283743 NM_000407 ENSG00000203618 GP1BB BDPLT1|BS|CD42C|GPIBB|GPIbbeta glycoprotein Ib platelet subunit beta protein-coding chr9-1247 chr9 27125210 27125420 + 14.1 0.000 intron (NM_001290078, intron 1 of 20) intron (NM_001290078, intron 1 of 20) 16174 NM_001290077 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr6-2156 chr6 16523759 16523969 + 14.1 0.000 intron (NM_000332, intron 5 of 8) intron (NM_000332, intron 5 of 8) 236320 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr2-3044 chr2 84459271 84459481 + 14.1 0.000 promoter-TSS (NM_003849) promoter-TSS (NM_003849) -96 NM_003849 8802 Hs.270428 NM_003849 ENSG00000163541 SUCLG1 GALPHA|MTDPS9|SUCLA1 succinate-CoA ligase alpha subunit protein-coding chr5-1694 chr5 84437809 84438019 + 14.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -53034 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr4-1713 chr4 178827897 178828107 + 14.1 0.000 Intergenic Intergenic -920066 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr7-3272 chr7 17021217 17021427 + 14.1 0.000 Intergenic Intergenic -139339 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr12-2817 chr12 117412660 117412870 + 14.1 0.000 Intergenic Intergenic -50963 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr17-3860 chr17 47013408 47013618 + 14.1 0.000 Intergenic L1MC4|LINE|L1 -34260 NM_203400 388394 Hs.367999 NM_203400 ENSG00000179673 RPRML - reprimo like protein-coding chr16-1409 chr16 2145868 2146078 + 14.1 0.000 Intergenic Intergenic -2171 NM_001308053 25837 Hs.3797 NM_014353 ENSG00000167964 RAB26 V46133 RAB26, member RAS oncogene family protein-coding chr5-2317 chr5 58846913 58847123 + 14.1 0.000 intron (NM_138453, intron 4 of 4) intron (NM_138453, intron 4 of 4) 152880 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr22-1729 chr22 20494916 20495126 + 14.1 0.000 intron (NR_033825, intron 1 of 5) intron (NR_033825, intron 1 of 5) 774 NM_032775 84861 Hs.517419 NM_032775 ENSG00000099910 KLHL22 KELCHL kelch like family member 22 protein-coding chr1-3808 chr1 17546577 17546787 + 14.1 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) 6984 NM_018125 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr1-2125 chr1 209651217 209651427 + 14.1 0.000 promoter-TSS (NM_001017402) promoter-TSS (NM_001017402) 12 NM_001017402 3914 Hs.497636 NM_000228 ENSG00000196878 LAMB3 AI1A|BM600-125KDA|LAM5|LAMNB1 laminin subunit beta 3 protein-coding chr6-4406 chr6 26556592 26556802 + 14.1 0.000 Intergenic Intergenic -12627 NR_134611 105374988 Hs.551772 NR_134611 ENSG00000284607 LOC105374988 - uncharacterized LOC105374988 ncRNA chr21-389 chr21 33683428 33683638 + 14.1 0.000 intron (NM_001001132, intron 1 of 29) intron (NM_001001132, intron 1 of 29) 41032 NM_001331010 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr3-1427 chr3 195196339 195196549 + 14.1 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 48573 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr19-2791 chr19 46954979 46955189 + 14.1 0.000 intron (NM_004491, intron 3 of 6) intron (NM_004491, intron 3 of 6) -64753 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr6-1509 chr6 158362088 158362298 + 14.1 0.000 intron (NM_020245, intron 1 of 13) intron (NM_020245, intron 1 of 13) 39211 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr9-2440 chr9 2109183 2109393 + 14.1 0.000 intron (NM_001289397, intron 23 of 32) intron (NM_001289397, intron 23 of 32) -48374 NM_001289398 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr12-2609 chr12 122891792 122892002 + 14.1 0.000 intron (NM_024667, intron 1 of 3) intron (NM_024667, intron 1 of 3) 4227 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr22-1492 chr22 35505621 35505831 + 14.1 0.000 Intergenic Intergenic -34768 NM_001366725 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr11-7037 chr11 119222342 119222552 + 14.1 0.000 intron (NM_005188, intron 1 of 15) intron (NM_005188, intron 1 of 15) 16171 NM_005188 867 Hs.504096 NM_005188 ENSG00000110395 CBL C-CBL|CBL2|FRA11B|NSLL|RNF55 Cbl proto-oncogene protein-coding chr14-870 chr14 77031667 77031877 + 14.1 0.000 Intergenic Intergenic -3064 NM_024496 64207 Hs.179260 NM_024496 ENSG00000119669 IRF2BPL C14orf4|EAP1|NEDAMSS interferon regulatory factor 2 binding protein like protein-coding chr9-1930 chr9 4293333 4293543 + 14.1 0.000 intron (NM_001042413, intron 1 of 10) intron (NM_001042413, intron 1 of 10) 6630 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr18-2204 chr18 63315290 63315500 + 14.1 0.000 intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 3985 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr2-1305 chr2 10167598 10167808 + 14.1 0.000 intron (NR_161344, intron 3 of 3) intron (NR_161344, intron 3 of 3) 24968 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr14-1254 chr14 105268008 105268218 + 14.1 0.000 intron (NM_001242788, intron 2 of 16) intron (NM_001242788, intron 2 of 16) -18709 NM_001242789 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr6-2042 chr6 73983980 73984190 + 14.1 0.000 Intergenic Intergenic -85366 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr7-4673 chr7 38980868 38981078 + 14.1 0.000 non-coding (NR_138047, exon 7 of 7) non-coding (NR_138047, exon 7 of 7) 3064 NM_001166018 11281 Hs.137106 NM_007252 ENSG00000106536 POU6F2 RPF-1|WT5|WTSL POU class 6 homeobox 2 protein-coding chr1-2907 chr1 12356393 12356603 + 14.1 0.000 exon (NM_018156, exon 48 of 69) exon (NM_018156, exon 48 of 69) 126468 NM_015378 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr3-3369 chr3 45389427 45389637 + 14.1 0.000 intron (NM_001368263, intron 1 of 20) intron (NM_001368263, intron 1 of 20) 956 NM_015340 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr15-866 chr15 43185855 43186065 + 14.1 0.000 TTS (NM_001347004) TTS (NM_001347004) 557 NM_012142 23582 Hs.36794 NM_012142 ENSG00000166946 CCNDBP1 DIP1|GCIP|HHM cyclin D1 binding protein 1 protein-coding chr1-2780 chr1 174191570 174191780 + 14.1 0.000 intron (NM_001366445, intron 1 of 13) intron (NM_001366445, intron 1 of 13) 32155 NM_001366448 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr9-2799 chr9 119826750 119826960 + 14.1 0.000 Intergenic L2a|LINE|L2 -108205 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr17-4633 chr17 10743719 10743929 + 14.1 0.000 intron (NR_073456, intron 2 of 3) intron (NR_073456, intron 2 of 3) -13495 NM_001330139 388335 Hs.462230 NM_001004313 ENSG00000187824 TMEM220 - transmembrane protein 220 protein-coding chr17-1160 chr17 18218979 18219189 + 14.1 0.000 Intergenic Intergenic -6551 NM_004140 3996 Hs.513983 NM_004140 ENSG00000131899 LLGL1 DLG4|HUGL|HUGL-1|HUGL1|LLGL|Lgl1|Mgl1 LLGL scribble cell polarity complex component 1 protein-coding chr6-5026 chr6 111132910 111133120 + 14.1 0.000 intron (NM_018593, intron 1 of 5) HERV17-int|LTR|ERV1 19181 NR_145796 109623478 NR_145796 SNORD166 - small nucleolar RNA, C/D box 166 snoRNA chr18-744 chr18 58764455 58764665 + 14.1 0.000 Intergenic Intergenic -49320 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr11-5412 chr11 67989995 67990205 + 14.1 0.000 TTS (NM_030930) TTS (NM_030930) 13997 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr2-2642 chr2 158665131 158665341 + 14.1 0.000 intron (NM_001005476, intron 15 of 20) intron (NM_001005476, intron 15 of 20) 69766 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr6-2143 chr6 13194902 13195112 + 14.1 0.000 intron (NM_001322314, intron 5 of 12) intron (NM_001322314, intron 5 of 12) 88435 NR_134859 100130357 Hs.484678 NM_001242698 LOC100130357 - uncharacterized LOC100130357 ncRNA chr19-1960 chr19 48455961 48456171 + 14.1 0.000 3' UTR (NM_031485, exon 7 of 7) 3' UTR (NM_031485, exon 7 of 7) 359 NM_013348 3770 Hs.144011 NM_013348 ENSG00000182324 KCNJ14 IRK4|KIR2.4 potassium voltage-gated channel subfamily J member 14 protein-coding chr7-2222 chr7 121302409 121302619 + 14.1 0.000 Intergenic Intergenic -22853 NM_016087 51384 Hs.272375 NM_016087 ENSG00000002745 WNT16 - Wnt family member 16 protein-coding chr6-1419 chr6 143579745 143579955 + 14.1 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -10511 NR_027113 285740 Hs.432656 NR_027113 ENSG00000235740 PHACTR2-AS1 - PHACTR2 antisense RNA 1 ncRNA chr6-3181 chr6 127221393 127221603 + 14.1 0.000 Intergenic Intergenic -45184 NM_001242851 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr3-2360 chr3 158668573 158668783 + 14.1 0.000 intron (NM_020169, intron 4 of 5) intron (NM_020169, intron 4 of 5) 3970 NM_020169 56925 Hs.478067 NM_020169 ENSG00000079257 LXN ECI|TCI latexin protein-coding chrX-506 chrX 89942664 89942874 + 14.1 0.000 Intergenic LTR1B1|LTR|ERV1 20861 NM_138960 90316 Hs.592220 NM_138960 ENSG00000153779 TGIF2LX TGIFLX TGFB induced factor homeobox 2 like X-linked protein-coding chr19-2013 chr19 45799972 45800182 + 14.1 0.000 intron (NM_030785, intron 5 of 5) AluSz|SINE|Alu -7232 NM_004943 1762 Hs.515474 NM_004943 ENSG00000185800 DMWD D19S593E|DMR-N9|DMRN9|gene59 DM1 locus, WD repeat containing protein-coding chr5-443 chr5 160311917 160312127 + 14.1 0.000 intron (NM_024565, intron 1 of 6) CpG-22740 542 NM_024565 79616 Hs.14070 NM_024565 ENSG00000135083 CCNJL - cyclin J like protein-coding chr5-2352 chr5 76999509 76999719 + 14.1 0.000 Intergenic Intergenic -30790 NM_018046 55109 Hs.634849 NM_018046 ENSG00000164252 AGGF1 GPATC7|GPATCH7|HSU84971|HUS84971|VG5Q angiogenic factor with G-patch and FHA domains 1 protein-coding chr17-1677 chr17 82016189 82016399 + 14.1 0.000 intron (NM_001251888, intron 13 of 16) intron (NM_001251888, intron 13 of 16) 6584 NM_001271006 201254 Hs.37616 NM_144998 ENSG00000169689 CENPX CENP-X|D9|FAAP10|MHF2|STRA13 centromere protein X protein-coding chr20-1468 chr20 2314726 2314936 + 14.1 0.000 intron (NM_003245, intron 5 of 12) intron (NM_003245, intron 5 of 12) 18830 NM_003245 7053 Hs.2022 NM_003245 ENSG00000125780 TGM3 TGE|UHS2 transglutaminase 3 protein-coding chr7-1040 chr7 99558144 99558354 + 14.1 0.000 promoter-TSS (NM_138494) promoter-TSS (NM_138494) -173 NM_024061 79027 Hs.599798 NM_024061 ENSG00000197343 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding chr2-6361 chr2 103490314 103490524 + 14.1 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -505990 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr17-3000 chr17 74551613 74551823 + 14.1 0.000 Intergenic Intergenic -5603 NM_006678 10871 Hs.2605 NM_006678 ENSG00000167850 CD300C CLM-6|CMRF-35|CMRF-35A|CMRF35|CMRF35-A1|CMRF35A|CMRF35A1|IGSF16|LIR CD300c molecule protein-coding chr1-961 chr1 234609236 234609446 + 14.1 0.000 exon (NM_182972, exon 1 of 2) exon (NM_182972, exon 1 of 2) 184 NM_001077397 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr17-1255 chr17 32341536 32341746 + 14.1 0.000 intron (NM_022344, intron 1 of 9) intron (NM_022344, intron 1 of 9) 532 NM_022344 64149 Hs.655257 NM_022344 ENSG00000108666 C17orf75 NJMU-R1|SRI2 chromosome 17 open reading frame 75 protein-coding chr5-2312 chr5 58002309 58002519 + 14.1 0.000 Intergenic MER44B|DNA|TcMar-Tigger -103252 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr11-2827 chr11 128715011 128715221 + 14.1 0.000 intron (NM_002017, intron 1 of 8) MIRb|SINE|MIR -19093 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr1-4077 chr1 215485847 215486057 + 14.1 0.000 Intergenic L3b|LINE|CR1 -81352 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr15-578 chr15 41477224 41477434 + 14.1 0.000 intron (NM_015138, intron 13 of 17) intron (NM_015138, intron 13 of 17) -16545 NM_002220 3706 Hs.2722 NM_002220 ENSG00000137825 ITPKA IP3-3KA|IP3KA inositol-trisphosphate 3-kinase A protein-coding chr1-2456 chr1 54408367 54408577 + 14.1 0.000 Intergenic Intergenic -2078 NM_018070 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr3-1766 chr3 196005561 196005771 + 14.1 0.000 Intergenic L2a|LINE|L2 -15387 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr15-1692 chr15 61660664 61660874 + 14.1 0.000 Intergenic Intergenic -69149 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr3-1861 chr3 116930906 116931116 + 14.1 0.000 non-coding (NR_121607, exon 2 of 2) non-coding (NR_121607, exon 2 of 2) 9580 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr12-2405 chr12 46264117 46264327 + 14.1 0.000 intron (NM_001278387, intron 1 of 17) intron (NM_001278387, intron 1 of 17) 2294 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr13-1767 chr13 113119708 113119918 + 14.1 0.000 non-coding (NR_051961, exon 7 of 7) non-coding (NR_051961, exon 7 of 7) -2986 NM_001312674 2159 Hs.361463 NM_000504 ENSG00000126218 F10 FX|FXA coagulation factor X protein-coding chr11-3752 chr11 43818490 43818700 + 14.1 0.000 intron (NM_016142, intron 6 of 10) intron (NM_016142, intron 6 of 10) -62236 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr2-2143 chr2 133241409 133241619 + 14.1 0.000 intron (NM_207481, intron 4 of 17) intron (NM_207481, intron 4 of 17) -24681 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr4-1084 chr4 143513771 143513981 + 14.1 0.000 non-coding (NR_104027, exon 2 of 2) non-coding (NR_104027, exon 2 of 2) 174 NM_003601 8467 Hs.558422 NM_003601 ENSG00000153147 SMARCA5 ISWI|SNF2H|WCRF135|hISWI|hSNF2H SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding chr19-1237 chr19 40191246 40191456 + 14.1 0.000 promoter-TSS (NM_002446) promoter-TSS (NM_002446) -75 NM_002446 4294 Hs.466743 NM_002446 ENSG00000130758 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding chr3-2866 chr3 42660009 42660219 + 14.1 0.000 intron (NM_145166, intron 2 of 5) intron (NM_145166, intron 2 of 5) -5726 NR_125400 101928323 NR_125400 LOC101928323 - uncharacterized LOC101928323 ncRNA chr9-1338 chr9 109453431 109453641 + 14.1 0.000 intron (NM_001145368, intron 5 of 24) intron (NM_001145368, intron 5 of 24) -2152 NM_001145369 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chr7-3557 chr7 17655304 17655514 + 14.1 0.000 Intergenic L1MEc|LINE|L1 -96500 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr22-754 chr22 27724829 27725039 + 14.1 0.000 Intergenic Intergenic 76822 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr17-1560 chr17 17515670 17515880 + 14.1 0.000 intron (NM_148173, intron 3 of 6) intron (NM_148173, intron 3 of 6) -19380 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr10-2750 chr10 119418361 119418571 + 14.1 0.000 intron (NM_005308, intron 4 of 15) intron (NM_005308, intron 4 of 15) 40494 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr16-1367 chr16 4747304 4747514 + 14.1 0.000 TTS (NM_021646) TTS (NM_021646) 12872 NM_139170 146562 Hs.602738 NM_139170 ENSG00000166246 C16orf71 - chromosome 16 open reading frame 71 protein-coding chr3-2695 chr3 54965946 54966156 + 14.1 0.000 intron (NM_001304389, intron 1 of 2) intron (NM_001304389, intron 1 of 2) 1051 NM_001304389 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr11-2469 chr11 61888423 61888633 + 14.1 0.000 intron (NM_021727, intron 1 of 11) intron (NM_021727, intron 1 of 11) 3017 NM_021727 3995 Hs.21765 NM_021727 ENSG00000221968 FADS3 CYB5RP|LLCDL3 fatty acid desaturase 3 protein-coding chr17-2387 chr17 77886227 77886437 + 14.1 0.000 Intergenic Intergenic -2245 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr4-745 chr4 139555193 139555403 + 14.1 0.000 intron (NR_131339, intron 1 of 3) CpG 1471 NR_131339 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr16-1258 chr16 29925198 29925408 + 14.1 0.000 intron (NM_178863, intron 1 of 5) intron (NM_178863, intron 1 of 5) 923 NR_110933 253980 Hs.534590 NM_178863 ENSG00000174943 KCTD13 BACURD1|FKSG86|PDIP1|POLDIP1|hBACURD1 potassium channel tetramerization domain containing 13 protein-coding chr3-895 chr3 65006436 65006646 + 14.1 0.000 intron (NR_038264, intron 4 of 5) intron (NR_038264, intron 4 of 5) -318541 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr8-1131 chr8 124147978 124148188 + 14.1 0.000 intron (NR_103547, intron 1 of 4) intron (NR_103547, intron 1 of 4) 23439 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr5-3850 chr5 124824743 124824953 + 14.1 0.000 Intergenic Intergenic -79736 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr18-456 chr18 9116616 9116826 + 14.1 0.000 intron (NM_021074, intron 1 of 7) intron (NM_021074, intron 1 of 7) 14022 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr4-515 chr4 140755992 140756202 + 14.1 0.000 5' UTR (NM_015130, exon 1 of 21) 5' UTR (NM_015130, exon 1 of 21) 288 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr12-2153 chr12 113702946 113703156 + 14.1 0.000 Intergenic Intergenic 70632 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr2-4185 chr2 190952438 190952648 + 14.1 0.000 intron (NM_014905, intron 14 of 17) intron (NM_014905, intron 14 of 17) 61707 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr1-2402 chr1 196181220 196181430 + 14.1 0.000 Intergenic MER54B|LTR|ERVL -92610 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr5-647 chr5 143205457 143205667 + 14.1 0.000 intron (NM_001349547, intron 20 of 21) intron (NM_001349547, intron 20 of 21) 13062 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr2-1273 chr2 74198486 74198696 + 14.1 0.000 promoter-TSS (NR_027405) promoter-TSS (NR_027405) -24 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr18-264 chr18 8707243 8707453 + 14.1 0.000 non-coding (NR_120598, exon 1 of 2) non-coding (NR_120598, exon 1 of 2) 273 NR_120598 100287082 Hs.439434 NR_120598 ENSG00000265962 GACAT2 MTCL1-AS1|MTCL1AS1 gastric cancer associated transcript 2 ncRNA chr2-2612 chr2 37390553 37390763 + 14.1 0.000 Intergenic Intergenic 46028 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr2-5628 chr2 189797910 189798120 + 14.1 0.000 intron (NM_001289408, intron 3 of 11) MER47B|DNA|TcMar-Tigger 13565 NM_001321045 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr5-1859 chr5 138185759 138185969 + 14.1 0.000 intron (NM_005733, intron 16 of 18) intron (NM_005733, intron 16 of 18) 6752 NM_005733 10112 Hs.718626 NM_005733 ENSG00000112984 KIF20A MKLP2|RAB6KIFL kinesin family member 20A protein-coding chr17-1271 chr17 63571902 63572112 + 14.1 0.000 intron (NR_073585, intron 1 of 7) intron (NR_073585, intron 1 of 7) 21530 NM_005828 10238 Hs.410596 NM_005828 ENSG00000136485 DCAF7 AN11|HAN11|SWAN-1|WDR68 DDB1 and CUL4 associated factor 7 protein-coding chrX-440 chrX 70979414 70979624 + 14.1 0.000 Intergenic MER20|DNA|hAT-Charlie -48423 NM_032803 84889 Hs.175220 NM_032803 ENSG00000165349 SLC7A3 ATRC3|CAT-3|CAT3 solute carrier family 7 member 3 protein-coding chr17-3097 chr17 83136754 83136964 + 14.1 0.000 Intergenic Intergenic 55713 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr4-499 chr4 30719425 30719635 + 14.1 0.000 promoter-TSS (NM_032456) promoter-TSS (NM_032456) -839 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr7-2253 chr7 158802558 158802768 + 14.1 0.000 intron (NM_020728, intron 1 of 21) intron (NM_020728, intron 1 of 21) 26846 NM_001367773 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr10-3708 chr10 110945030 110945240 + 14.1 0.000 intron (NR_136749, intron 1 of 7) L1M4|LINE|L1 -7880 NR_026715 644511 Hs.632083 NR_026715 ENSG00000234118 RPL13AP6 RPL13A_7_1096|bA348N5.5 ribosomal protein L13a pseudogene 6 pseudo chr13-1148 chr13 32195656 32195866 + 14.1 0.000 intron (NM_023037, intron 29 of 60) intron (NM_023037, intron 29 of 60) 116193 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr14-773 chr14 36658941 36659151 + 14.1 0.000 intron (NM_006194, intron 1 of 4) CpG 1478 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr9-1107 chr9 136410647 136410857 + 14.1 0.000 promoter-TSS (NM_015160) promoter-TSS (NM_015160) 94 NM_015160 23203 Hs.495471 NM_015160 ENSG00000165688 PMPCA Alpha-MPP|CLA1|CPD3|INPP5E|P-55|SCAR2 peptidase, mitochondrial processing alpha subunit protein-coding chr11-1699 chr11 66555777 66555987 + 14.1 0.000 intron (NR_047663, intron 7 of 20) intron (NR_047663, intron 7 of 20) 8979 NM_001104 89 Hs.654432 NM_001104 ENSG00000248746 ACTN3 ACTN3D actinin alpha 3 (gene/pseudogene) protein-coding chr19-3885 chr19 35596502 35596712 + 14.1 0.000 Intergenic Intergenic -1288 NR_110750 102723617 Hs.579904 NR_110750 ENSG00000224910 LINC01766 - long intergenic non-protein coding RNA 1766 ncRNA chr2-2761 chr2 215355638 215355848 + 14.1 0.000 Intergenic L1ME3B|LINE|L1 43684 NM_004044 471 Hs.90280 NM_004044 ENSG00000138363 ATIC AICAR|AICARFT|HEL-S-70p|IMPCHASE|PURH 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding chr3-1436 chr3 16512078 16512288 + 14.1 0.000 intron (NM_015150, intron 1 of 9) intron (NM_015150, intron 1 of 9) 1516 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr6-1173 chr6 73572418 73572628 + 14.1 0.000 Intergenic LTR12C|LTR|ERV1 -51491 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr2-8694 chr2 151984477 151984687 + 14.1 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) -10604 NM_001330117 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr3-5457 chr3 182754083 182754293 + 14.1 0.000 Intergenic LTR78|LTR|ERV1 -39316 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr7-2166 chr7 66141057 66141267 + 14.1 0.000 intron (NR_024548, intron 5 of 6) intron (NR_024548, intron 5 of 6) 26315 NM_014478 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr8-1546 chr8 104665312 104665522 + 14.1 0.000 Intergenic Intergenic -76393 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr5-1409 chr5 151156406 151156616 + 14.1 0.000 intron (NM_001363114, intron 1 of 24) intron (NM_001363114, intron 1 of 24) 1268 NM_001155 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr8-505 chr8 141265280 141265490 + 14.1 0.000 Intergenic Intergenic -10756 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr1-5241 chr1 201692728 201692938 + 14.1 0.000 intron (NR_046696, intron 2 of 2) intron (NR_046696, intron 2 of 2) -26675 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chr12-885 chr12 93742258 93742468 + 14.1 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -4540 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr4-2537 chr4 66048868 66049078 + 14.1 0.000 Intergenic Intergenic -227851 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr6-2376 chr6 138498774 138498984 + 14.1 0.000 intron (NM_020464, intron 1 of 6) intron (NM_020464, intron 1 of 6) 615 NM_001144060 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr19-2114 chr19 1502278 1502488 + 14.1 0.000 Intergenic Intergenic 10636 NM_001367197 339366 Hs.371674 NM_213604 ENSG00000185761 ADAMTSL5 THSD6 ADAMTS like 5 protein-coding chr1-2586 chr1 43932803 43933013 + 14.1 0.000 promoter-TSS (NM_057090) promoter-TSS (NM_057090) -412 NM_057090 9048 Hs.632404 NM_003976 ENSG00000117407 ARTN ART|ENOVIN|EVN|NBN artemin protein-coding chr11-1981 chr11 26947456 26947666 + 14.1 0.000 Intergenic Intergenic -46551 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr22-1663 chr22 41741324 41741534 + 14.1 0.000 intron (NM_152513, intron 11 of 30) L2b|LINE|L2 41926 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr10-1344 chr10 104353507 104353717 + 14.1 0.000 promoter-TSS (NR_108036) promoter-TSS (NR_108036) -37 NR_108036 100505869 Hs.338140 NR_108036 CFAP58-DT CCDC147-AS1|CFAP58-AS1|lncITPRIP-1 CFAP58 divergent transcript ncRNA chr7-1518 chr7 36392800 36393010 + 14.1 0.000 intron (NM_001284302, intron 1 of 22) intron (NM_001284302, intron 1 of 22) -2548 NM_001100425 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr9-916 chr9 128523316 128523526 + 14.1 0.000 intron (NM_001499, intron 5 of 13) intron (NM_001499, intron 5 of 13) 18729 NM_001499 2733 Hs.522418 NM_001499 ENSG00000119392 GLE1 CAAHC|CAAHD|GLE1L|LCCS|LCCS1|hGLE1 GLE1 RNA export mediator protein-coding chr3-2245 chr3 48063817 48064027 + 14.1 0.000 intron (NM_002375, intron 1 of 18) LTR8|LTR|ERV1 24926 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr5-1106 chr5 173315943 173316153 + 14.1 0.000 3' UTR (NM_003714, exon 4 of 4) 3' UTR (NM_003714, exon 4 of 4) 12318 NR_162132 113219469 NR_162132 MIR12118 - microRNA 12118 ncRNA chr15-445 chr15 75201968 75202178 + 14.1 0.000 intron (NM_015492, intron 1 of 2) CpG 191 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr3-4334 chr3 178182618 178182828 + 14.1 0.000 Intergenic MER45R|DNA|hAT-Tip100 -236478 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr2-2313 chr2 100670441 100670651 + 14.1 0.000 Intergenic Intergenic 66807 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr2-2647 chr2 174235817 174236027 + 14.1 0.000 intron (NM_001011708, intron 1 of 9) L1MEc|LINE|L1 12610 NM_001011708 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr2-3933 chr2 58859721 58859931 + 14.1 0.000 intron (NR_033873, intron 3 of 13) intron (NR_033873, intron 3 of 13) 339073 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr10-2644 chr10 91869521 91869731 + 14.1 0.000 Intergenic LTR33|LTR|ERVL 39860 NM_152429 143282 Hs.466120 NM_152429 ENSG00000174721 FGFBP3 C10orf13|FGF-BP3 fibroblast growth factor binding protein 3 protein-coding chr12-1898 chr12 67841076 67841286 + 14.1 0.000 Intergenic L1MA4|LINE|L1 -88054 NR_120456 101927922 Hs.450769 NR_120456 ENSG00000255772 LINC01479 HRAT39 long intergenic non-protein coding RNA 1479 ncRNA chr8-995 chr8 130280214 130280424 + 14.1 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 16214 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr5-1037 chr5 158119911 158120121 + 14.1 0.000 Intergenic Intergenic -260871 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr17-1767 chr17 31215920 31216130 + 14.1 0.000 intron (NM_001042492, intron 13 of 57) intron (NM_001042492, intron 13 of 57) 81214 NM_002544 4974 Hs.113874 NM_002544 ENSG00000126861 OMG OMGP oligodendrocyte myelin glycoprotein protein-coding chr9-3484 chr9 14616512 14616722 + 14.1 0.000 non-coding (NR_148716, exon 11 of 11) non-coding (NR_148716, exon 11 of 11) 76815 NM_001354130 340481 Hs.649522 NM_178566 ENSG00000175893 ZDHHC21 DHHC-21|DHHC21|DNZ1|HSPC097 zinc finger DHHC-type containing 21 protein-coding chr7-2743 chr7 44534503 44534713 + 14.1 0.000 exon (NM_001101648, exon 6 of 19) exon (NM_001101648, exon 6 of 19) 6722 NM_001300967 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr15-2812 chr15 38372684 38372894 + 14.1 0.000 Intergenic Intergenic -81338 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr16-2937 chr16 3454057 3454267 + 14.1 0.000 intron (NM_001317093, intron 2 of 6) intron (NM_001317093, intron 2 of 6) -3883 NM_001317098 79903 Hs.513296 NM_024845 ENSG00000122390 NAA60 HAT4|NAT15|NatF|hNaa60 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding chr14-862 chr14 54220234 54220444 + 14.1 0.000 Intergenic Intergenic -176529 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr18-1250 chr18 54217937 54218147 + 14.1 0.000 intron (NM_015832, intron 1 of 2) intron (NM_015832, intron 1 of 2) 4370 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr18-2115 chr18 51944953 51945163 + 14.1 0.000 Intergenic Intergenic -395139 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr20-506 chr20 47786561 47786771 + 14.1 0.000 promoter-TSS (NM_001161841) promoter-TSS (NM_001161841) -50 NM_001161841 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr5-1537 chr5 172714911 172715121 + 14.1 0.000 Intergenic Intergenic -40487 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr8-1061 chr8 41235982 41236192 + 14.1 0.000 Intergenic Intergenic 35056 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr2-2626 chr2 72278108 72278318 + 14.1 0.000 intron (NR_135773, intron 19 of 21) intron (NR_135773, intron 19 of 21) -130351 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr19-1941 chr19 17865930 17866140 + 14.1 0.000 Intergenic MIRb|SINE|MIR 3447 NR_000012 26780 Hs.684118 NR_000012 ENSG00000207166 SNORA68 RNU68|SNORA68A|U68 small nucleolar RNA, H/ACA box 68 snoRNA chr6-3038 chr6 56595583 56595793 + 14.1 0.000 intron (NM_001144770, intron 39 of 94) L2a|LINE|L2 47201 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr22-443 chr22 35342893 35343103 + 14.1 0.000 intron (NR_156428, intron 11 of 13) (CA)n|Simple_repeat|Simple_repeat -6199 NR_106717 102464824 NR_106717 ENSG00000274280 MIR6069 hsa-mir-6069 microRNA 6069 ncRNA chr20-522 chr20 24992315 24992525 + 14.1 0.000 intron (NM_020531, intron 1 of 8) CpG 331 NM_020531 57136 Hs.472330 NM_020531 ENSG00000101474 APMAP BSCv|C20orf3 adipocyte plasma membrane associated protein protein-coding chr22-600 chr22 37556838 37557048 + 14.1 0.000 Intergenic Intergenic -3537 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr8-1267 chr8 143311219 143311429 + 14.1 0.000 intron (NM_052963, intron 12 of 13) intron (NM_052963, intron 12 of 13) 19907 NM_030895 79943 Hs.512740 NM_030895 ENSG00000185730 ZNF696 - zinc finger protein 696 protein-coding chr17-950 chr17 40219137 40219347 + 14.1 0.000 promoter-TSS (NM_133264) promoter-TSS (NM_133264) -62 NM_133264 147179 Hs.421622 NM_133264 ENSG00000171475 WIPF2 WICH|WIRE WAS/WASL interacting protein family member 2 protein-coding chr20-1107 chr20 4158821 4159031 + 14.1 0.000 intron (NM_001270691, intron 1 of 7) intron (NM_001270691, intron 1 of 7) 10098 NM_175840 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr6-1276 chr6 85459379 85459589 + 14.1 0.000 intron (NM_002526, intron 1 of 8) intron (NM_002526, intron 1 of 8) 9401 NM_002526 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr2-2229 chr2 181354621 181354831 + 14.1 0.000 intron (NR_130784, intron 3 of 4) L2b|LINE|L2 -49074 NR_039637 100616213 NR_039637 ENSG00000266705 MIR4437 mir-4437 microRNA 4437 ncRNA chr8-803 chr8 121893744 121893954 + 14.1 0.000 Intergenic L2c|LINE|L2 -252409 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr11-3290 chr11 86136700 86136910 + 14.1 0.000 Intergenic Intergenic -66945 NM_001206947 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr22-277 chr22 28800103 28800313 + 14.1 0.000 intron (NM_005080, intron 1 of 4) CpG 364 NM_001079539 7494 Hs.437638 NM_005080 ENSG00000100219 XBP1 TREB-5|TREB5|XBP-1|XBP2 X-box binding protein 1 protein-coding chr5-945 chr5 77423443 77423653 + 14.1 0.000 intron (NM_001349751, intron 20 of 20) L1PA17|LINE|L1 68768 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr10-1714 chr10 78620401 78620611 + 14.1 0.000 Intergenic L1MB3|LINE|L1 353164 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr9-946 chr9 134572108 134572318 + 14.1 0.000 Intergenic Intergenic -69592 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr4-1257 chr4 13980450 13980660 + 14.1 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -131413 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr7-1494 chr7 139683573 139683783 + 14.1 0.000 intron (NM_001113239, intron 2 of 14) intron (NM_001113239, intron 2 of 14) 94320 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr4-1055 chr4 78433027 78433237 + 14.1 0.000 intron (NM_001166133, intron 38 of 41) intron (NM_001166133, intron 38 of 41) -118638 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr7-2854 chr7 107935031 107935241 + 14.1 0.000 intron (NM_002291, intron 27 of 33) intron (NM_002291, intron 27 of 33) 43953 NM_000108 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr2-1287 chr2 152407361 152407571 + 14.1 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 72292 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr1-1953 chr1 70205532 70205742 + 14.1 0.000 promoter-TSS (NM_004768) promoter-TSS (NM_004768) -58 NM_017768 55631 Hs.147836 NM_017768 ENSG00000066557 LRRC40 dJ677H15.1 leucine rich repeat containing 40 protein-coding chr17-1718 chr17 62740133 62740343 + 14.1 0.000 intron (NM_001288780, intron 6 of 10) intron (NM_001288780, intron 6 of 10) 34032 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr17-2246 chr17 8004890 8005100 + 14.1 0.000 intron (NM_000180, intron 3 of 19) G-rich|Low_complexity|Low_complexity 2325 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr15-2164 chr15 78409090 78409300 + 14.1 0.000 Intergenic MIRb|SINE|MIR -28236 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr19-2626 chr19 3931338 3931548 + 14.1 0.000 Intergenic Intergenic -1660 NM_001289117 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr2-3889 chr2 42896894 42897104 + 14.1 0.000 Intergenic MIRb|SINE|MIR -104416 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr12-2598 chr12 121045093 121045303 + 14.1 0.000 Intergenic Intergenic -5956 NM_001261825 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr2-3754 chr2 6823239 6823449 + 14.1 0.000 Intergenic Intergenic 17120 NR_126359 104326052 Hs.7155 NR_126359 NRIR lncRNA-CMPK2 negative regulator of interferon response ncRNA chr4-1146 chr4 54661737 54661947 + 14.1 0.000 intron (NM_000222, intron 1 of 20) intron (NM_000222, intron 1 of 20) 3914 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr6-1960 chr6 138088487 138088697 + 14.1 0.000 TTS (NM_022121) TTS (NM_022121) 18827 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1 p53 apoptosis effector related to PMP22 protein-coding chr12-3857 chr12 107315859 107316069 + 14.1 0.000 Intergenic Intergenic -2470 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr2-2168 chr2 241379775 241379985 + 14.1 0.000 intron (NM_014808, intron 2 of 26) intron (NM_014808, intron 2 of 26) 23595 NM_001282983 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr3-924 chr3 52300153 52300363 + 14.1 0.000 Intergenic Intergenic -5950 NR_029677 406925 NR_029677 ENSG00000207926 MIR135A1 MIRN135-1|MIRN135A1|mir-135a-1 microRNA 135a-1 ncRNA chr11-1743 chr11 119721524 119721734 + 14.1 0.000 intron (NM_203285, intron 1 of 7) intron (NM_203285, intron 1 of 7) 7571 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr20-1027 chr20 31751336 31751546 + 14.1 0.000 intron (NM_012112, intron 2 of 17) intron (NM_012112, intron 2 of 17) 12151 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr12-2371 chr12 19880208 19880418 + 14.1 0.000 Intergenic Intergenic -134372 NR_040098 100506393 Hs.658356 NR_040098 ENSG00000256287 LINC02398 - long intergenic non-protein coding RNA 2398 ncRNA chr16-1799 chr16 9102464 9102674 + 14.1 0.000 intron (NM_014117, intron 2 of 3) intron (NM_014117, intron 2 of 3) 10925 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr1-3069 chr1 19211231 19211441 + 14.1 0.000 intron (NR_135114, intron 1 of 1) AluJb|SINE|Alu 950 NR_135115 101927895 Hs.660534 NR_135114 ENSG00000230424 EMC1-AS1 - EMC1 antisense RNA 1 ncRNA chr2-1406 chr2 96531981 96532191 + 14.1 0.000 intron (NR_135564, intron 1 of 2) intron (NR_135564, intron 1 of 2) 220 NR_135564 105373496 Hs.570138 NR_135564 ENSG00000235480 LOC105373496 - uncharacterized LOC105373496 ncRNA chr2-4644 chr2 182594358 182594568 + 14.1 0.000 Intergenic CR1_Mam|LINE|CR1 -71618 NM_001003683 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr4-3514 chr4 150302508 150302718 + 14.1 0.000 intron (NM_001199282, intron 53 of 56) intron (NM_001199282, intron 53 of 56) 224168 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr20-655 chr20 39823301 39823511 + 14.1 0.000 Intergenic Intergenic -181055 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr5-5233 chr5 117641042 117641252 + 14.1 0.000 Intergenic MIRb|SINE|MIR -89214 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr1-2459 chr1 61742985 61743195 + 14.1 0.000 intron (NM_001350145, intron 1 of 43) CpG 610 NM_001350145 10207 Hs.478125 NM_005799 ENSG00000132849 PATJ Cipp|INADL|InaD-like|hINADL PATJ crumbs cell polarity complex component protein-coding chr14-1891 chr14 96255510 96255720 + 14.1 0.000 promoter-TSS (NM_000710) promoter-TSS (NM_000710) -595 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr12-1369 chr12 52976786 52976996 + 14.1 0.000 Intergenic Intergenic -27031 NM_001256293 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr10-5911 chr10 119350683 119350893 + 14.1 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -27184 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr10-629 chr10 46023445 46023655 + 14.1 0.000 promoter-TSS (NM_005437) promoter-TSS (NM_005437) -92 NM_005437 8031 Hs.643658 NM_005437 ENSG00000266412 NCOA4 ARA70|ELE1|PTC3|RFG nuclear receptor coactivator 4 protein-coding chr11-3325 chr11 112180105 112180315 + 14.1 0.000 intron (NM_031938, intron 2 of 11) MER2B|DNA|TcMar-Tigger 3844 NM_001256400 83875 Hs.728325 NM_031938 ENSG00000197580 BCO2 B-DIOX-II|BCDO2 beta-carotene oxygenase 2 protein-coding chr9-1415 chr9 125374837 125375047 + 14.1 0.000 Intergenic Intergenic 113116 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr14-1165 chr14 52117615 52117825 + 14.1 0.000 Intergenic Intergenic -48661 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr11-2888 chr11 45287442 45287652 + 14.1 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -1206 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr15-903 chr15 46892830 46893040 + 14.1 0.000 Intergenic Intergenic -291154 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr14-1281 chr14 85516828 85517038 + 14.1 0.000 Intergenic Intergenic -13092 NR_144386 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr18-595 chr18 49460558 49460768 + 14.1 0.000 promoter-TSS (NM_017653) promoter-TSS (NM_017653) -18 NM_001353216 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr6-1407 chr6 132764543 132764753 + 14.1 0.000 Intergenic Intergenic -1189 NM_078488 8875 Hs.293130 NM_004665 ENSG00000112303 VNN2 FOAP-4|GPI-80 vanin 2 protein-coding chr18-824 chr18 8107479 8107689 + 14.1 0.000 intron (NM_002845, intron 11 of 30) intron (NM_002845, intron 11 of 30) 259450 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr2-2410 chr2 27050139 27050349 + 14.1 0.000 promoter-TSS (NR_046730) promoter-TSS (NR_046730) 20 NR_046730 100874031 Hs.132725 NR_046730 ENSG00000231636 AGBL5-AS1 - AGBL5 antisense RNA 1 ncRNA chr2-2979 chr2 36469803 36470013 + 14.1 0.000 intron (NM_016441, intron 5 of 16) intron (NM_016441, intron 5 of 16) 114130 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr22-516 chr22 31561335 31561545 + 14.1 0.000 intron (NM_001007467, intron 8 of 32) intron (NM_001007467, intron 8 of 32) 60091 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr10-5576 chr10 90407413 90407623 + 14.1 0.000 intron (NR_110657, intron 3 of 6) MER4B|LTR|ERV1 133287 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr17-2319 chr17 48015222 48015432 + 14.1 0.000 Intergenic Intergenic -17555 NR_162100 113218499 NR_162100 MIR10226 - microRNA 10226 ncRNA chr2-3082 chr2 111452770 111452980 + 14.1 0.000 intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 42286 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr10-2213 chr10 52217106 52217316 + 14.1 0.000 intron (NM_001098512, intron 9 of 17) intron (NM_001098512, intron 9 of 17) 96917 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr11-1765 chr11 18618748 18618958 + 14.1 0.000 intron (NM_194285, intron 1 of 5) intron (NM_194285, intron 1 of 5) 15489 NM_194285 144108 Hs.738650 NM_194285 ENSG00000179119 SPTY2D1 Spt2 SPT2 chromatin protein domain containing 1 protein-coding chr3-4138 chr3 120688166 120688376 + 14.1 0.000 non-coding (NR_157022, exon 9 of 9) non-coding (NR_157022, exon 9 of 9) -6032 NM_000187 3081 Hs.368254 NM_000187 ENSG00000113924 HGD AKU|HGO homogentisate 1,2-dioxygenase protein-coding chr9-2128 chr9 107158513 107158723 + 14.1 0.000 Intergenic Intergenic -55630 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr6-1356 chr6 45236743 45236953 + 14.1 0.000 intron (NM_001350325, intron 2 of 10) HERVK9-int|LTR|ERVK -39078 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr9-3081 chr9 16868785 16868995 + 14.1 0.000 intron (NM_001317940, intron 1 of 5) intron (NM_001317940, intron 1 of 5) 1780 NM_001317940 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr10-2165 chr10 121510165 121510375 + 14.1 0.000 intron (NM_001144917, intron 7 of 15) intron (NM_001144917, intron 7 of 15) 21044 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr17-2036 chr17 40168102 40168312 + 14.1 0.000 exon (NM_007359, exon 11 of 14) exon (NM_007359, exon 11 of 14) 6274 NR_106926 102466986 NR_106926 ENSG00000284144 MIR6866 hsa-mir-6866 microRNA 6866 ncRNA chr8-1748 chr8 25509902 25510112 + 14.1 0.000 Intergenic Intergenic 50774 NM_152562 157313 Hs.33366 NM_152562 ENSG00000184661 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding chrX-605 chrX 139933230 139933440 + 14.1 0.000 promoter-TSS (NM_001353810) promoter-TSS (NM_001353810) -282 NM_001353811 286410 Hs.88252 NM_173694 ENSG00000101974 ATP11C ATPIG|ATPIQ|HACXL ATPase phospholipid transporting 11C protein-coding chr14-941 chr14 31229794 31230004 + 14.1 0.000 Intergenic Intergenic -22106 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr17-5541 chr17 43914178 43914388 + 14.1 0.000 Intergenic MIRb|SINE|MIR -2925 NR_026770 23591 Hs.721804 NR_026770 ENSG00000267496 FAM215A APR-2|C17orf88|LINC00530 family with sequence similarity 215 member A ncRNA chr11-1417 chr11 46184286 46184496 + 14.1 0.000 Intergenic L2a|LINE|L2 12436 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chr15-1911 chr15 78540425 78540635 + 14.1 0.000 promoter-TSS (NM_002789) promoter-TSS (NM_002789) 86 NM_002789 5685 Hs.251531 NM_002789 ENSG00000041357 PSMA4 HC9|HsT17706|PSC9 proteasome subunit alpha 4 protein-coding chr12-1680 chr12 104045278 104045488 + 14.1 0.000 intron (NM_031302, intron 2 of 11) intron (NM_031302, intron 2 of 11) 18794 NM_001316967 83468 Hs.631650 NM_031302 ENSG00000120820 GLT8D2 - glycosyltransferase 8 domain containing 2 protein-coding chr3-987 chr3 14364029 14364239 + 14.1 0.000 Intergenic Intergenic -11566 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA chr17-2301 chr17 41709030 41709240 + 14.1 0.000 Intergenic MIRb|SINE|MIR -3196 NM_000805 2520 Hs.2681 NM_000805 ENSG00000184502 GAST GAS gastrin protein-coding chr9-810 chr9 130433244 130433454 + 14.1 0.000 exon (NM_001291815, exon 98 of 98) exon (NM_001291815, exon 98 of 98) -11358 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr2-3726 chr2 236341615 236341825 + 14.1 0.000 intron (NM_001270584, intron 15 of 17) intron (NM_001270584, intron 15 of 17) -77375 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr3-5728 chr3 17262123 17262333 + 14.1 0.000 intron (NM_014744, intron 15 of 21) Tigger3a|DNA|TcMar-Tigger 329032 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr4-2218 chr4 139902089 139902299 + 14.1 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -225821 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr5-3142 chr5 62115145 62115355 + 14.1 0.000 Intergenic Intergenic -190912 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr10-1283 chr10 27242068 27242278 + 14.1 0.000 promoter-TSS (NM_001352574) promoter-TSS (NM_001352574) -62 NM_001352574 91452 Hs.530597 NM_145698 ENSG00000107897 ACBD5 - acyl-CoA binding domain containing 5 protein-coding chr2-2855 chr2 159946430 159946640 + 14.1 0.000 3' UTR (NM_001007267, exon 27 of 27) 3' UTR (NM_001007267, exon 27 of 27) -41779 NM_001198759 100526664 Hs.153563 NM_001198759 ENSG00000248672 LY75-CD302 CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6 LY75-CD302 readthrough protein-coding chrX-595 chrX 122566050 122566260 + 14.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -618088 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr15-2245 chr15 101506463 101506673 + 14.1 0.000 Intergenic Intergenic -16584 NM_138325 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr7-1880 chr7 94655938 94656148 + 14.1 0.000 promoter-TSS (NM_001184962) promoter-TSS (NM_001184962) 90 NM_003919 8910 Hs.371199 NM_003919 ENSG00000127990 SGCE DYT11|ESG|epsilon-SG sarcoglycan epsilon protein-coding chr7-4474 chr7 136528371 136528581 + 14.1 0.000 Intergenic Intergenic -340176 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr12-1483 chr12 14803007 14803217 + 14.1 0.000 promoter-TSS (NM_175874) promoter-TSS (NM_175874) 366 NM_016312 51729 Hs.655138 NM_016312 ENSG00000084463 WBP11 NPWBP|PPP1R165|SIPP1|WBP-11 WW domain binding protein 11 protein-coding chr4-2241 chr4 152970598 152970808 + 14.1 0.000 intron (NM_001371116, intron 10 of 11) intron (NM_001371116, intron 10 of 11) 27720 NM_033393 85462 Hs.132629 NM_033393 ENSG00000137460 FHDC1 - FH2 domain containing 1 protein-coding chr16-4160 chr16 5752003 5752213 + 14.1 0.000 Intergenic L1PA13|LINE|L1 119641 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA chr1-2310 chr1 52927756 52927966 + 14.1 0.000 intron (NM_001193617, intron 1 of 14) CpG 585 NM_001193600 6342 Hs.476365 NM_002979 ENSG00000116171 SCP2 NLTP|NSL-TP|SCP-2|SCP-CHI|SCP-X|SCPX sterol carrier protein 2 protein-coding chr2-2631 chr2 85154152 85154362 + 14.1 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) 20865 NM_031283 83439 Hs.516297 NM_031283 ENSG00000152284 TCF7L1 TCF-3|TCF3 transcription factor 7 like 1 protein-coding chr5-2296 chr5 53821840 53822050 + 14.1 0.000 Intergenic Intergenic -2263 NR_147167 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr13-1167 chr13 37134760 37134970 + 14.1 0.000 Intergenic Intergenic -29201 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr22-395 chr22 50252387 50252597 + 14.1 0.000 TTS (NM_001303252) TTS (NM_001303252) -1227 NM_032019 83933 Hs.26593 NM_032019 ENSG00000100429 HDAC10 HD10 histone deacetylase 10 protein-coding chr2-8266 chr2 100681239 100681449 + 14.1 0.000 Intergenic AluSz|SINE|Alu 77605 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr1-3557 chr1 244450584 244450794 + 14.1 0.000 intron (NM_001365073, intron 1 of 12) intron (NM_001365073, intron 1 of 12) 1220 NM_001126 159 Hs.498313 NM_001126 ENSG00000035687 ADSS ADEH|ADSS 2|ADSS2 adenylosuccinate synthase protein-coding chr2-1416 chr2 135052231 135052441 + 14.1 0.000 promoter-TSS (NM_012233) promoter-TSS (NM_012233) 44 NM_012233 22930 Hs.306327 NM_012233 ENSG00000115839 RAB3GAP1 P130|RAB3GAP|RAB3GAP130|WARBM1 RAB3 GTPase activating protein catalytic subunit 1 protein-coding chr6-1211 chr6 43496311 43496521 + 14.1 0.000 intron (NM_001350567, intron 2 of 10) intron (NM_001350567, intron 2 of 10) 6658 NM_001350566 93643 Hs.520145 NM_080604 ENSG00000137221 TJAP1 PILT|TJP4 tight junction associated protein 1 protein-coding chr3-1973 chr3 124007309 124007519 + 14.1 0.000 Intergenic Intergenic -15244 NR_133917 54763 Hs.567516 NM_017578 ENSG00000065371 ROPN1 CT91|ODF6|RHPNAP1|ROPN1A|ropporin rhophilin associated tail protein 1 protein-coding chr20-1098 chr20 63833566 63833776 + 14.1 0.000 Intergenic Intergenic -2407 NM_001369741 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr3-4053 chr3 76040990 76041200 + 14.1 0.000 Intergenic MamRep1151|LTR?|LTR? -255546 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr4-2794 chr4 25768036 25768246 + 14.1 0.000 intron (NM_001297592, intron 17 of 23) intron (NM_001297592, intron 17 of 23) 94847 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding chr3-7242 chr3 195051270 195051480 + 14.1 0.000 Intergenic L1PREC2|LINE|L1 -43213 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr3-577 chr3 170189183 170189393 + 14.1 0.000 Intergenic Intergenic -7555 NM_024947 80012 Hs.529592 NM_024947 ENSG00000173889 PHC3 EDR3|HPH3 polyhomeotic homolog 3 protein-coding chr4-344 chr4 55446005 55446215 + 14.1 0.000 intron (NM_004898, intron 18 of 22) AluJb|SINE|Alu 50153 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr9-3465 chr9 4590631 4590841 + 14.1 0.000 intron (NR_148444, intron 16 of 16) intron (NR_148444, intron 16 of 16) 71487 NR_148447 55064 Hs.179615 NM_017985 ENSG00000106686 SPATA6L C9orf68|bA6J24.2 spermatogenesis associated 6 like protein-coding chr13-412 chr13 42334161 42334371 + 14.1 0.000 Intergenic Intergenic 62114 NM_016248 11215 Hs.105105 NM_016248 ENSG00000023516 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A-kinase anchoring protein 11 protein-coding chr9-604 chr9 127612009 127612219 + 14.1 0.000 promoter-TSS (NM_003165) promoter-TSS (NM_003165) -163 NM_003165 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr9-3559 chr9 68967588 68967798 + 14.1 0.000 intron (NR_110647, intron 1 of 2) L2a|LINE|L2 8148 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chr3-5279 chr3 120817705 120817915 + 14.1 0.000 intron (NR_135570, intron 1 of 1) intron (NR_135570, intron 1 of 1) 18547 NR_135570 101926983 Hs.553055 NR_135570 ENSG00000243593 LINC02049 - long intergenic non-protein coding RNA 2049 ncRNA chr7-2117 chr7 23462957 23463167 + 14.1 0.000 intron (NM_006547, intron 2 of 14) intron (NM_006547, intron 2 of 14) 7429 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding chr1-5468 chr1 90287110 90287320 + 14.1 0.000 Intergenic Intergenic 292105 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr4-1744 chr4 98568759 98568969 + 14.1 0.000 intron (NM_005723, intron 1 of 7) MamRep605|LTR?|LTR? 89747 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr20-2424 chr20 23440193 23440403 + 14.1 0.000 exon (NM_138283, exon 2 of 4) exon (NM_138283, exon 2 of 4) 613 NM_138283 128817 Hs.352134 NM_138283 ENSG00000125823 CSTL1 CTES1|RCET11|dJ322G13.4 cystatin like 1 protein-coding chr10-5077 chr10 44105143 44105353 + 14.1 0.000 Intergenic L1MB2|LINE|L1 -187502 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr16-1239 chr16 1289867 1290077 + 14.1 0.000 Intergenic Intergenic -19180 NM_194261 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr5-1255 chr5 43017859 43018069 + 14.1 0.000 non-coding (NR_034086, exon 1 of 2) non-coding (NR_034086, exon 1 of 2) 847 NR_034085 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA chr11-3745 chr11 35282620 35282830 + 14.1 0.000 intron (NM_001252652, intron 9 of 11) intron (NM_001252652, intron 9 of 11) 119775 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr20-799 chr20 383011 383221 + 14.1 0.000 intron (NM_001301201, intron 2 of 4) intron (NM_001301201, intron 2 of 4) 1773 NM_001301193 57761 Hs.516826 NM_021158 ENSG00000101255 TRIB3 C20orf97|NIPK|SINK|SKIP3|TRB3 tribbles pseudokinase 3 protein-coding chr10-644 chr10 13347826 13348036 + 14.1 0.000 intron (NM_001195604, intron 1 of 7) CpG 362 NM_012247 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr2-2499 chr2 157246526 157246736 + 14.1 0.000 Intergenic Intergenic -11074 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr1-10067 chr1 93028870 93029080 + 14.1 0.000 Intergenic Intergenic -50260 NM_001164393 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr11-2145 chr11 64721002 64721212 + 14.1 0.000 intron (NM_015080, intron 1 of 22) intron (NM_015080, intron 1 of 22) 2081 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr5-1305 chr5 54090778 54090988 + 14.1 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) -139284 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chrX-1057 chrX 123749661 123749871 + 14.1 0.000 Intergenic L2a|LINE|L2 -16714 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr17-3091 chr17 82430202 82430412 + 14.0 0.000 intron (NM_173620, intron 4 of 11) MLT1C|LTR|ERVL-MaLR -11721 NM_024648 79701 Hs.187505 NM_024648 ENSG00000181396 OGFOD3 C17orf101 2-oxoglutarate and iron dependent oxygenase domain containing 3 protein-coding chr1-2555 chr1 15919338 15919548 + 14.0 0.000 exon (NM_015001, exon 8 of 15) exon (NM_015001, exon 8 of 15) 56689 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr8-1329 chr8 26611368 26611578 + 14.0 0.000 intron (NM_001244604, intron 3 of 13) intron (NM_001244604, intron 3 of 13) 33068 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr2-1517 chr2 69567421 69567631 + 14.0 0.000 intron (NM_014911, intron 2 of 21) intron (NM_014911, intron 2 of 21) -47355 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr10-1784 chr10 77355948 77356158 + 14.0 0.000 intron (NR_126365, intron 3 of 5) intron (NR_126365, intron 3 of 5) 5181 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr4-791 chr4 6640462 6640672 + 14.0 0.000 5' UTR (NM_033296, exon 1 of 2) 5' UTR (NM_033296, exon 1 of 2) 476 NM_033296 93621 Hs.406590 NM_033296 ENSG00000179010 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding chr7-1804 chr7 100371500 100371710 + 14.0 0.000 Intergenic Intergenic -1882 NM_013439 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr6-1057 chr6 12008856 12009066 + 14.0 0.000 Intergenic Intergenic -3351 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr5-1634 chr5 139569171 139569381 + 14.0 0.000 intron (NM_181838, intron 2 of 7) intron (NM_181838, intron 2 of 7) 7937 NM_003339 7322 Hs.108332 NM_003339 ENSG00000131508 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin conjugating enzyme E2 D2 protein-coding chr16-2449 chr16 84963310 84963520 + 14.0 0.000 Intergenic LTR103_Mam|LTR|ERV1? 48120 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr19-1319 chr19 46849359 46849569 + 14.0 0.000 intron (NM_021575, intron 1 of 3) intron (NM_021575, intron 1 of 3) 850 NM_001301076 1175 Hs.119591 NM_004069 ENSG00000042753 AP2S1 AP17|CLAPS2|FBH3|FBHOk|HHC3 adaptor related protein complex 2 subunit sigma 1 protein-coding chr1-2804 chr1 7401836 7402046 + 14.0 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) -12187 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr3-2127 chr3 73071221 73071431 + 14.0 0.000 Intergenic Intergenic 9667 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr2-3337 chr2 203759360 203759570 + 14.0 0.000 Intergenic L1MA3|LINE|L1 52826 NM_001243077 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr3-1797 chr3 33578960 33579170 + 14.0 0.000 intron (NM_001365629, intron 23 of 39) intron (NM_001365629, intron 23 of 39) 80614 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr11-2729 chr11 10709801 10710011 + 14.0 0.000 Intergenic Intergenic -15918 NM_001206880 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr14-804 chr14 77306694 77306904 + 14.0 0.000 intron (NM_013382, intron 2 of 20) intron (NM_013382, intron 2 of 20) 14083 NM_013382 29954 Hs.132989 NM_013382 ENSG00000009830 POMT2 LGMD2N|LGMDR14|MDDGA2|MDDGB2|MDDGC2 protein O-mannosyltransferase 2 protein-coding chr3-2664 chr3 37708811 37709021 + 14.0 0.000 intron (NM_002207, intron 18 of 27) MIR|SINE|MIR 152864 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr3-949 chr3 190533616 190533826 + 14.0 0.000 intron (NM_001364879, intron 1 of 10) intron (NM_001364879, intron 1 of 10) 19636 NM_001167928 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr13-1928 chr13 78241519 78241729 + 14.0 0.000 intron (NR_047001, intron 2 of 5) intron (NR_047001, intron 2 of 5) 186769 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr16-1275 chr16 66508288 66508498 + 14.0 0.000 non-coding (NR_073520, exon 9 of 9) non-coding (NR_073520, exon 9 of 9) -31991 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr2-4100 chr2 145874490 145874700 + 14.0 0.000 Intergenic Intergenic -712462 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-1302 chr2 238061516 238061726 + 14.0 0.000 intron (NM_016510, intron 1 of 11) L2|LINE|L2 620 NM_016510 51540 Hs.731909 NM_016510 ENSG00000132330 SCLY SCL|hSCL selenocysteine lyase protein-coding chr9-2262 chr9 99113804 99114014 + 14.0 0.000 intron (NM_004612, intron 1 of 8) L3|LINE|CR1 8796 NM_001130916 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr1-5510 chr1 180765147 180765357 + 14.0 0.000 intron (NR_137330, intron 2 of 12) MIR|SINE|MIR 133230 NR_137330 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding chr2-1590 chr2 96540145 96540355 + 14.0 0.000 intron (NM_001319092, intron 1 of 6) intron (NM_001319092, intron 1 of 6) 2371 NM_001319092 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr17-1474 chr17 78365956 78366166 + 14.0 0.000 intron (NR_110847, intron 2 of 4) intron (NR_110847, intron 2 of 4) 5059 NR_110846 101928674 Hs.637297 NR_110845 ENSG00000266970 LOC101928674 - uncharacterized LOC101928674 ncRNA chr7-1976 chr7 149716083 149716293 + 14.0 0.000 intron (NM_032534, intron 1 of 16) intron (NM_032534, intron 1 of 16) 1177 NM_032534 84626 Hs.299560 NM_032534 ENSG00000133619 KRBA1 - KRAB-A domain containing 1 protein-coding chr11-1800 chr11 120178832 120179042 + 14.0 0.000 Intergenic Intergenic 9960 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chr9-1086 chr9 19231825 19232035 + 14.0 0.000 intron (NR_073201, intron 1 of 31) intron (NR_073201, intron 1 of 31) 1237 NM_017925 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr17-1164 chr17 31564907 31565117 + 14.0 0.000 Intergenic Intergenic 5016 NR_029710 406968 NR_029710 ENSG00000207614 MIR193A MIRN193|MIRN193A|mir-193a microRNA 193a ncRNA chr12-1790 chr12 121582103 121582313 + 14.0 0.000 Intergenic MIRb|SINE|MIR -1185 NM_032590 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr2-2483 chr2 131106381 131106591 + 14.0 0.000 intron (NM_001309448, intron 1 of 6) intron (NM_001309448, intron 1 of 6) 1639 NM_001267064 55041 Hs.469944 NM_017958 ENSG00000115762 PLEKHB2 EVT2 pleckstrin homology domain containing B2 protein-coding chr16-2280 chr16 3152861 3153071 + 14.0 0.000 Intergenic tRNA-Arg-AGG|tRNA|tRNA 8675 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chr11-7080 chr11 121429629 121429839 + 14.0 0.000 Intergenic MIRb|SINE|MIR -22580 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr19-4196 chr19 44512370 44512580 + 14.0 0.000 intron (NM_001102597, intron 8 of 11) MER117|DNA|hAT-Charlie -11953 NM_001288759 7733 Hs.22305 NM_013256 ENSG00000167384 ZNF180 HHZ168 zinc finger protein 180 protein-coding chr2-3473 chr2 172328490 172328700 + 14.0 0.000 Intergenic Intergenic -98741 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr2-4091 chr2 136019663 136019873 + 14.0 0.000 Intergenic Intergenic -34084 NM_001293312 1615 Hs.503787 NM_001349 ENSG00000115866 DARS HBSL|aspRS aspartyl-tRNA synthetase protein-coding chr11-2948 chr11 74050195 74050405 + 14.0 0.000 intron (NM_001286577, intron 26 of 32) intron (NM_001286577, intron 26 of 32) -41063 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr11-2134 chr11 19931263 19931473 + 14.0 0.000 intron (NM_182964, intron 6 of 37) intron (NM_182964, intron 6 of 37) -91188 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr1-3702 chr1 200625116 200625326 + 14.0 0.000 Intergenic Intergenic -4470 NM_014875 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding chr8-994 chr8 130279263 130279473 + 14.0 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 17165 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr1-2326 chr1 179017045 179017255 + 14.0 0.000 Intergenic Intergenic -8654 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr1-3018 chr1 244066016 244066226 + 14.0 0.000 Intergenic Intergenic 12916 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr2-3166 chr2 200455459 200455669 + 14.0 0.000 intron (NM_001100423, intron 8 of 12) intron (NM_001100423, intron 8 of 12) 54504 NM_001321547 130535 Hs.605775 NM_152387 ENSG00000155729 KCTD18 6530404F10Rik potassium channel tetramerization domain containing 18 protein-coding chr20-521 chr20 24161121 24161331 + 14.0 0.000 Intergenic Intergenic -38541 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr12-3566 chr12 22525482 22525692 + 14.0 0.000 intron (NM_001286176, intron 5 of 26) intron (NM_001286176, intron 5 of 26) 18610 NM_001286174 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding chr20-545 chr20 58112024 58112234 + 14.0 0.000 Intergenic Intergenic -38773 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr1-6846 chr1 101979814 101980024 + 14.0 0.000 intron (NR_110210, intron 1 of 7) THE1D-int|LTR|ERVL-MaLR 17315 NM_001288823 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr15-2225 chr15 95263406 95263616 + 14.0 0.000 Intergenic Intergenic 63589 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr2-3582 chr2 48723179 48723389 + 14.0 0.000 intron (NM_000233, intron 6 of 10) intron (NM_000233, intron 6 of 10) 32440 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr4-3526 chr4 158302578 158302788 + 14.0 0.000 Intergenic Intergenic 92197 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr3-2004 chr3 12893362 12893572 + 14.0 0.000 Intergenic Intergenic -8256 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr2-1570 chr2 30971351 30971561 + 14.0 0.000 intron (NM_001253826, intron 3 of 15) intron (NM_001253826, intron 3 of 15) 158184 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr5-4840 chr5 61931940 61932150 + 14.0 0.000 Intergenic MIR|SINE|MIR -196347 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr4-2873 chr4 75555785 75555995 + 14.0 0.000 promoter-TSS (NM_001206981) promoter-TSS (NM_001206981) -158 NM_001257072 152816 Hs.24510 NM_178497 ENSG00000174792 ODAPH AI2A4|C4orf26 odontogenesis associated phosphoprotein protein-coding chr20-564 chr20 3209423 3209633 + 14.0 0.000 promoter-TSS (NM_181493) promoter-TSS (NM_181493) 30 NM_181493 3704 Hs.415299 NM_033453 ENSG00000125877 ITPA C20orf37|HLC14-06-P|ITPase|My049|NTPase|dJ794I6.3 inosine triphosphatase protein-coding chr2-2822 chr2 75459982 75460192 + 14.0 0.000 Intergenic Intergenic -63981 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr2-3989 chr2 85257981 85258191 + 14.0 0.000 intron (NM_031283, intron 3 of 11) MIR|SINE|MIR 44434 NR_136323 102724579 Hs.669216 NR_136323 LOC102724579 - uncharacterized LOC102724579 ncRNA chr6-1289 chr6 132679153 132679363 + 14.0 0.000 Intergenic L1PA16|LINE|L1 -33232 NM_138327 134864 Hs.375030 NM_138327 ENSG00000146399 TAAR1 TA1|TAR1|TRAR1 trace amine associated receptor 1 protein-coding chr2-2381 chr2 7119143 7119353 + 14.0 0.000 Intergenic Intergenic -41368 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr1-4550 chr1 65177677 65177887 + 14.0 0.000 intron (NM_001330616, intron 1 of 4) intron (NM_001330616, intron 1 of 4) 28788 NM_001330616 205 Hs.10862 NM_013410 ENSG00000162433 AK4 AK 4|AK3|AK3L1|AK3L2 adenylate kinase 4 protein-coding chr13-648 chr13 31630749 31630959 + 14.0 0.000 Intergenic LTR8A|LTR|ERV1 -108672 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr13-721 chr13 76012106 76012316 + 14.0 0.000 Intergenic Intergenic -77079 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr5-4336 chr5 160325961 160326171 + 14.0 0.000 intron (NR_131769, intron 1 of 7) intron (NR_131769, intron 1 of 7) -13502 NM_001308173 79616 Hs.14070 NM_024565 ENSG00000135083 CCNJL - cyclin J like protein-coding chr2-2473 chr2 113872255 113872465 + 14.0 0.000 intron (NR_110174, intron 1 of 4) MLT1C|LTR|ERVL-MaLR -17574 NR_102318 10096 Hs.433512 NM_005721 ENSG00000115091 ACTR3 ARP3 actin related protein 3 protein-coding chr6-391 chr6 71288560 71288770 + 14.0 0.000 promoter-TSS (NM_024576) promoter-TSS (NM_024576) -146 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr10-1603 chr10 44932655 44932865 + 14.0 0.000 intron (NM_001123376, intron 3 of 4) intron (NM_001123376, intron 3 of 4) 21423 NM_001123376 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr21-124 chr21 5128397 5128607 + 14.0 0.000 promoter-TSS (NM_004649).2 promoter-TSS (NM_004649).2 -62 NR_135220 8209 Hs.413482 NM_004649 ENSG00000160221 GATD3A C21orf33|ES1|GATD3|GT335|HES1|KNPH|KNPI glutamine amidotransferase like class 1 domain containing 3A protein-coding chr1-4241 chr1 203058102 203058312 + 14.0 0.000 intron (NM_001304331, intron 19 of 29) GA-rich|Low_complexity|Low_complexity -25588 NR_160550 114004358 NR_160550 MYOPARR - myogenin promoter associated myogenic regulatory antisense long non coding RNA ncRNA chr6-378 chr6 154733168 154733378 + 14.0 0.000 promoter-TSS (NM_001286189) promoter-TSS (NM_001286189) -105 NM_001286189 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chrX-288 chrX 69133945 69134155 + 14.0 0.000 Intergenic L2|LINE|L2 31403 NM_145119 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr20-469 chr20 46350491 46350701 + 14.0 0.000 intron (NM_173073, intron 9 of 9) intron (NM_173073, intron 9 of 9) 13829 NM_015945 51006 Hs.593344 NM_015945 ENSG00000080189 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 member C2 protein-coding chr14-373 chr14 70600569 70600779 + 14.0 0.000 promoter-TSS (NM_001284209) promoter-TSS (NM_001284209) 16 NM_005466 10001 Hs.497353 NM_005466 ENSG00000133997 MED6 ARC33|NY-REN-28 mediator complex subunit 6 protein-coding chr19-1616 chr19 45427708 45427918 + 14.0 0.000 intron (NM_001369412, intron 1 of 9) intron (NM_001369412, intron 1 of 9) -3896 NM_001369418 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr2-8502 chr2 128136527 128136737 + 14.0 0.000 intron (NR_027671, intron 15 of 40) L1MC2|LINE|L1 45432 NR_027671 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr5-1857 chr5 137370821 137371031 + 14.0 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 128400 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr3-2301 chr3 113686206 113686416 + 14.0 0.000 intron (NM_001009899, intron 1 of 6) L1M1|LINE|L1 10331 NM_001009899 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr17-1672 chr17 81500169 81500379 + 14.0 0.000 Intergenic Intergenic 12525 NM_001614 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr16-769 chr16 85300934 85301144 + 14.0 0.000 Intergenic Intergenic 5286 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr5-1286 chr5 157541106 157541316 + 14.0 0.000 intron (NM_033274, intron 3 of 22) intron (NM_033274, intron 3 of 22) 34564 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr2-2781 chr2 241078368 241078578 + 14.0 0.000 intron (NR_138463, intron 6 of 6) L1MB7|LINE|L1 23814 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr9-1877 chr9 99873667 99873877 + 14.0 0.000 Intergenic Intergenic 32829 NR_038853 441461 Hs.163155 NR_038853 ENSG00000255145 STX17-AS1 - STX17 antisense RNA 1 ncRNA chr4-1644 chr4 94678863 94679073 + 14.0 0.000 Intergenic Intergenic 78565 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr10-2583 chr10 72490980 72491190 + 14.0 0.000 intron (NM_001195519, intron 1 of 6) intron (NM_001195519, intron 1 of 6) 32901 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr1-4783 chr1 15982905 15983115 + 14.0 0.000 Intergenic ERVL-E-int|LTR|ERVL -6878 NM_001324138 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr9-2400 chr9 133916839 133917049 + 14.0 0.000 intron (NM_001134398, intron 2 of 29) MIR3|SINE|MIR 75380 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr12-1280 chr12 91243275 91243485 + 14.0 0.000 Intergenic L1P3|LINE|L1 -60563 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr12-3524 chr12 132062026 132062236 + 14.0 0.000 exon (NM_015409, exon 46 of 53) exon (NM_015409, exon 46 of 53) -22152 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400P1 EP400NL EP400 pseudogene 1 pseudo chr10-693 chr10 43401777 43401987 + 14.0 0.000 intron (NM_001098204, intron 1 of 3) intron (NM_001098204, intron 1 of 3) -4536 NM_001098207 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr2-1467 chr2 55133812 55134022 + 14.0 0.000 intron (NM_001321904, intron 1 of 9) MER41B|LTR|ERV1 3914 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr10-949 chr10 29714511 29714721 + 14.0 0.000 intron (NM_001323599, intron 1 of 38) intron (NM_001323599, intron 1 of 38) 21185 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr7-2548 chr7 82562761 82562971 + 14.0 0.000 Intergenic Intergenic -118910 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr18-1458 chr18 47095414 47095624 + 14.0 0.000 intron (NM_001353909, intron 12 of 12) THE1D|LTR|ERVL-MaLR 54981 NM_032124 84064 Hs.465041 NM_032124 ENSG00000167220 HDHD2 3110052N05Rik|HEL-S-301 haloacid dehalogenase like hydrolase domain containing 2 protein-coding chr5-808 chr5 112653711 112653921 + 14.0 0.000 Intergenic Intergenic 25380 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr14-1804 chr14 31800832 31801042 + 14.0 0.000 intron (NM_001201573, intron 5 of 8) LTR33|LTR|ERVL 86368 NM_001201574 80224 Hs.288981 NM_025152 ENSG00000151413 NUBPL C14orf127|IND1|MC1DN21|huInd1 nucleotide binding protein like protein-coding chr16-1616 chr16 85739164 85739374 + 14.0 0.000 intron (NR_161454, intron 1 of 3) intron (NR_161454, intron 1 of 3) 2431 NR_031731 100302261 NR_031731 ENSG00000283416 MIR1910 MIRN1910|hsa-mir-1910|mir-1910 microRNA 1910 ncRNA chr20-997 chr20 58711657 58711867 + 14.0 0.000 intron (NM_024663, intron 7 of 11) intron (NM_024663, intron 7 of 11) 18962 NM_024663 79716 Hs.654868 NM_024663 ENSG00000215440 NPEPL1 bA261P9.2 aminopeptidase like 1 protein-coding chr20-1083 chr20 49866319 49866529 + 14.0 0.000 intron (NR_048540, intron 8 of 11) L1ME1|LINE|L1 2565 NR_162136 113219455 NR_162136 MIR12122 - microRNA 12122 ncRNA chr1-4551 chr1 65430049 65430259 + 14.0 0.000 intron (NM_017526, intron 3 of 3) intron (NM_017526, intron 3 of 3) 9438 NM_001198681 54741 Hs.23581 NM_017526 ENSG00000213625 LEPROT LEPR|OB-RGRP|OBRGRP|VPS55 leptin receptor overlapping transcript protein-coding chr9-2745 chr9 97944292 97944502 + 14.0 0.000 intron (NM_018437, intron 1 of 4) L2|LINE|L2 455 NM_018437 55363 Hs.176626 NM_018437 ENSG00000136929 HEMGN CT155|EDAG|EDAG-1|NDR hemogen protein-coding chr15-1412 chr15 49496385 49496595 + 14.0 0.000 intron (NM_001330293, intron 10 of 10) intron (NM_001330293, intron 10 of 10) 73248 NM_002009 2252 Hs.567268 NM_002009 ENSG00000140285 FGF7 HBGF-7|KGF fibroblast growth factor 7 protein-coding chr11-1726 chr11 96341770 96341980 + 14.0 0.000 TTS (NR_036125) TTS (NR_036125) 437 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr8-1481 chr8 33263898 33264108 + 14.0 0.000 Intergenic Intergenic 209143 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr4-1223 chr4 153115725 153115935 + 14.0 0.000 Intergenic Intergenic -36504 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr10-3255 chr10 124618379 124618589 + 14.0 0.000 TTS (NM_014661) TTS (NM_014661) -85544 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr2-2227 chr2 176986694 176986904 + 14.0 0.000 Intergenic Intergenic 225612 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr9-3287 chr9 70480399 70480609 + 14.0 0.000 Intergenic Intergenic -65847 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr6-3096 chr6 89122689 89122899 + 14.0 0.000 Intergenic Intergenic -4723 NM_080743 135295 Hs.254414 NM_080743 ENSG00000154548 SRSF12 SFRS13B|SFRS19|SRrp35 serine and arginine rich splicing factor 12 protein-coding chr3-1166 chr3 134426929 134427139 + 14.0 0.000 Intergenic Intergenic -10793 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA chr1-3573 chr1 2107484 2107694 + 14.0 0.000 intron (NM_001033582, intron 1 of 14) intron (NM_001033582, intron 1 of 14) 2873 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr12-2980 chr12 114123359 114123569 + 14.0 0.000 Intergenic AluJo|SINE|Alu 118306 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr12-1983 chr12 124337018 124337228 + 14.0 0.000 TTS (NR_106940) TTS (NR_106940) 119 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr18-391 chr18 703567 703777 + 14.0 0.000 intron (NM_202758, intron 2 of 14) L2b|LINE|L2 8958 NM_001318760 55556 Hs.658550 NM_017512 ENSG00000132199 ENOSF1 FUCD|RTS|TYMSAS enolase superfamily member 1 protein-coding chr3-2310 chr3 124850635 124850845 + 14.0 0.000 intron (NM_001354766, intron 3 of 13) intron (NM_001354766, intron 3 of 13) 36625 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr8-573 chr8 102961479 102961689 + 14.0 0.000 intron (NR_126339, intron 2 of 2) intron (NR_126339, intron 2 of 2) -59499 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr13-1412 chr13 31875156 31875366 + 14.0 0.000 intron (NR_027062, intron 1 of 3) intron (NR_027062, intron 1 of 3) 28478 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr1-3897 chr1 62296173 62296383 + 14.0 0.000 intron (NM_181712, intron 1 of 9) intron (NM_181712, intron 1 of 9) 23156 NM_181712 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chr3-3272 chr3 86931026 86931236 + 14.0 0.000 Intergenic Intergenic 60018 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr1-3442 chr1 21655137 21655347 + 14.0 0.000 intron (NM_002885, intron 1 of 24) intron (NM_002885, intron 1 of 24) -3344 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr18-696 chr18 25464226 25464436 + 14.0 0.000 Intergenic Intergenic -112165 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr4-3836 chr4 123198840 123199050 + 14.0 0.000 intron (NM_001345856, intron 14 of 15) L2|LINE|L2 -197850 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr2-4162 chr2 179569836 179570046 + 14.0 0.000 intron (NR_148056, intron 3 of 9) intron (NR_148056, intron 3 of 9) -7353 NM_001113398 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr2-2525 chr2 187698750 187698960 + 14.0 0.000 Intergenic Intergenic -144350 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr16-2818 chr16 68636995 68637205 + 14.0 0.000 Intergenic MIRc|SINE|MIR -8210 NM_001793 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr4-1064 chr4 99404744 99404954 + 14.0 0.000 Intergenic LTR33|LTR|ERVL 30285 NM_001166504 131 Hs.389 NM_000673 ENSG00000196344 ADH7 ADH4 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding chr11-2111 chr11 126992211 126992421 + 14.0 0.000 intron (NM_001301097, intron 1 of 15) L3|LINE|CR1 -3774 NR_036126 100422918 NR_036126 ENSG00000266215 MIR3167 - microRNA 3167 ncRNA chr15-680 chr15 89307135 89307345 + 14.0 0.000 intron (NM_001113378, intron 32 of 37) intron (NM_001113378, intron 32 of 37) 19570 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr10-5858 chr10 114259954 114260164 + 14.0 0.000 intron (NM_001272046, intron 4 of 13) intron (NM_001272046, intron 4 of 13) 20445 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr2-1991 chr2 45944205 45944415 + 14.0 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 292635 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr13-1250 chr13 101150008 101150218 + 14.0 0.000 intron (NM_001350749, intron 15 of 43) L1ME3A|LINE|L1 -205749 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr14-1378 chr14 31537898 31538108 + 14.0 0.000 Intergenic Intergenic -23401 NR_120408 80224 Hs.288981 NM_025152 ENSG00000151413 NUBPL C14orf127|IND1|MC1DN21|huInd1 nucleotide binding protein like protein-coding chr4-1348 chr4 186844301 186844511 + 14.0 0.000 Intergenic Intergenic -120550 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr3-1657 chr3 162391062 162391272 + 14.0 0.000 Intergenic Intergenic 894359 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr3-1916 chr3 177614998 177615208 + 14.0 0.000 intron (NR_047568, intron 2 of 3) intron (NR_047568, intron 2 of 3) 173182 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr20-815 chr20 49604632 49604842 + 14.0 0.000 Intergenic Intergenic -36600 NM_000961 5740 Hs.302085 NM_000961 ENSG00000124212 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 synthase protein-coding chr16-1701 chr16 2949562 2949772 + 14.0 0.000 3' UTR (NM_001308068, exon 10 of 10) 3' UTR (NM_001308068, exon 10 of 10) -14608 NM_024507 79412 Hs.661128 NM_024507 ENSG00000131650 KREMEN2 KRM2 kringle containing transmembrane protein 2 protein-coding chr17-2996 chr17 73068485 73068695 + 14.0 0.000 intron (NM_001352692, intron 3 of 9) intron (NM_001352692, intron 3 of 9) 24098 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr18-399 chr18 9627513 9627723 + 14.0 0.000 Intergenic L1ME3A|LINE|L1 12354 NR_110774 101927323 Hs.151204 NR_110773 ENSG00000263627 PPP4R1-AS1 - PPP4R1 antisense RNA 1 ncRNA chrX-390 chrX 119871141 119871351 + 14.0 0.000 promoter-TSS (NM_004541) promoter-TSS (NM_004541) 487 NM_006978 7737 Hs.458365 NM_006978 ENSG00000125352 RNF113A Cwc24|RNF113|TTD5|ZNF183 ring finger protein 113A protein-coding chr7-1457 chr7 84510585 84510795 + 14.0 0.000 Intergenic L2a|LINE|L2 -21786 NR_110079 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr8-1871 chr8 20012118 20012328 + 14.0 0.000 Intergenic Intergenic 72970 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr2-2687 chr2 9554924 9555134 + 14.0 0.000 intron (NM_003183, intron 1 of 18) MamRep1879|DNA|hAT-Tip100? 801 NM_003183 6868 Hs.404914 NM_003183 ENSG00000151694 ADAM17 ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE ADAM metallopeptidase domain 17 protein-coding chr9-2622 chr9 16752810 16753020 + 14.0 0.000 intron (NM_017637, intron 1 of 6) intron (NM_017637, intron 1 of 6) 26101 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr11-2366 chr11 122170869 122171079 + 14.0 0.000 intron (NR_024430, intron 2 of 3) intron (NR_024430, intron 2 of 3) 9658 NR_137185 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr3-2342 chr3 141489345 141489555 + 14.0 0.000 intron (NM_006506, intron 1 of 23) intron (NM_006506, intron 1 of 23) 2423 NM_001303245 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr15-995 chr15 68493352 68493562 + 14.0 0.000 Intergenic Intergenic -24916 NM_001324014 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr17-1652 chr17 49730223 49730433 + 14.0 0.000 intron (NM_030802, intron 2 of 7) intron (NM_030802, intron 2 of 7) -22364 NM_001278784 10237 Hs.154073 NM_005827 ENSG00000121073 SLC35B1 UGTREL1 solute carrier family 35 member B1 protein-coding chr2-3541 chr2 10851670 10851880 + 14.0 0.000 Intergenic L1MB3|LINE|L1 -14063 NM_001282705 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr9-847 chr9 136734502 136734712 + 14.0 0.000 Intergenic LTR13|LTR|ERVK -6423 NR_003672 84973 Hs.495480 NR_003672 ENSG00000233016 SNHG7 NCRNA00061 small nucleolar RNA host gene 7 ncRNA chr6-2452 chr6 16681528 16681738 + 14.0 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 78551 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr3-2055 chr3 148227630 148227840 + 14.0 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -53156 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr10-1166 chr10 29389887 29390097 + 14.0 0.000 Intergenic Intergenic -19542 NR_110926 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr3-2458 chr3 86561269 86561479 + 14.0 0.000 Intergenic Intergenic 79431 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr3-1941 chr3 196688474 196688684 + 14.0 0.000 Intergenic Intergenic 23671 NM_032898 84984 Hs.282800 NM_032898 ENSG00000174007 CEP19 C3orf34|MOSPGF centrosomal protein 19 protein-coding chr12-1550 chr12 101793472 101793682 + 14.0 0.000 intron (NM_024312, intron 2 of 20) intron (NM_024312, intron 2 of 20) 37382 NM_024312 79158 Hs.46850 NM_024312 ENSG00000111670 GNPTAB GNPTA|ICD N-acetylglucosamine-1-phosphate transferase subunits alpha and beta protein-coding chr2-1904 chr2 149860477 149860687 + 14.0 0.000 Intergenic Intergenic -1391 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr11-2921 chr11 66714273 66714483 + 14.0 0.000 exon (NM_006946, exon 5 of 37) exon (NM_006946, exon 5 of 37) 7021 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr1-2782 chr1 184260492 184260702 + 14.0 0.000 Intergenic Intergenic -126432 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chrX-443 chrX 77895535 77895745 + 14.0 0.000 promoter-TSS (NM_001367916) promoter-TSS (NM_001367916) -72 NM_032121 84061 Hs.323562 NM_032121 ENSG00000102158 MAGT1 IAP|MRX95|OST3B|PRO0756|SLC58A1|XMEN|bA217H1.1 magnesium transporter 1 protein-coding chr1-6225 chr1 219292611 219292821 + 14.0 0.000 Intergenic Intergenic 117747 NM_001300772 127018 Hs.657617 NM_138794 ENSG00000143353 LYPLAL1 Q96AV0 lysophospholipase like 1 protein-coding chr6-2990 chr6 42054216 42054426 + 14.0 0.000 intron (NM_138572, intron 2 of 8) L1MB4|LINE|L1 3797 NM_138572 129685 Hs.520122 NM_138572 ENSG00000137413 TAF8 II|TAF|TAF(II)43|TAFII-43|TAFII43|TBN TATA-box binding protein associated factor 8 protein-coding chr17-1849 chr17 17958129 17958339 + 14.0 0.000 intron (NM_001288787, intron 1 of 13) MIR1_Amn|SINE|MIR 14166 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr7-1802 chr7 100199023 100199233 + 14.0 0.000 intron (NM_012447, intron 14 of 33) FLAM_C|SINE|Alu -20120 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr14-1009 chr14 105024904 105025114 + 14.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -3926 NM_145701 55038 Hs.34045 NM_017955 ENSG00000170779 CDCA4 HEPP|SEI-3/HEPP cell division cycle associated 4 protein-coding chr4-2647 chr4 182063081 182063291 + 14.0 0.000 Intergenic Intergenic 81329 NR_125905 90768 Hs.175465 NR_027107 TENM3-AS1 - TENM3 antisense RNA 1 ncRNA chr5-1838 chr5 106312472 106312682 + 14.0 0.000 Intergenic Intergenic 698437 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr3-1191 chr3 10205592 10205802 + 14.0 0.000 intron (NM_001570, intron 3 of 12) intron (NM_001570, intron 3 of 12) 40778 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr2-5759 chr2 220455382 220455592 + 14.0 0.000 Intergenic Intergenic -548922 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr2-1830 chr2 133634141 133634351 + 14.0 0.000 Intergenic Intergenic -65783 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr4-641 chr4 75940404 75940614 + 14.0 0.000 intron (NM_001363719, intron 1 of 8) CpG-21271 504 NM_001042402 27163 Hs.437365 NM_014435 ENSG00000138744 NAAA ASAHL|PLT N-acylethanolamine acid amidase protein-coding chr11-1280 chr11 69298826 69299036 + 14.0 0.000 Intergenic Intergenic 4776 NM_001293294 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr15-394 chr15 52529129 52529339 + 14.0 0.000 promoter-TSS (NM_000259) promoter-TSS (NM_000259) -184 NM_000259 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr2-3585 chr2 52918628 52918838 + 14.0 0.000 Intergenic Intergenic -216118 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr10-1963 chr10 29807508 29807718 + 14.0 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -70677 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr10-1213 chr10 14788580 14788790 + 14.0 0.000 Intergenic Intergenic -13788 NM_031453 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr8-1252 chr8 132673116 132673326 + 14.0 0.000 intron (NR_135907, intron 1 of 10) MIR|SINE|MIR 2324 NR_135912 23639 Hs.591865 NM_012472 ENSG00000129295 LRRC6 CILD19|LRTP|TSLRP leucine rich repeat containing 6 protein-coding chr10-290 chr10 129467003 129467213 + 14.0 0.000 promoter-TSS (NM_002412) promoter-TSS (NM_002412) -133 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr9-1530 chr9 129315170 129315380 + 14.0 0.000 Intergenic MLT2C1|LTR|ERVL -5741 NR_149714 414318 Hs.449434 NR_149714 C9orf106 - chromosome 9 open reading frame 106 (putative) ncRNA chr11-2095 chr11 110088098 110088308 + 14.0 0.000 Intergenic Intergenic -5189 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr7-3910 chr7 122485946 122486156 + 14.0 0.000 intron (NM_001167940, intron 11 of 29) Tigger1|DNA|TcMar-Tigger -181301 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chr10-1566 chr10 132730121 132730331 + 14.0 0.000 intron (NM_005539, intron 9 of 15) intron (NM_005539, intron 9 of 15) 48951 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr1-2916 chr1 22886439 22886649 + 14.0 0.000 intron (NM_004442, intron 6 of 15) L2b|LINE|L2 -23318 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr15-929 chr15 72078024 72078234 + 14.0 0.000 intron (NM_006901, intron 1 of 41) L1MC2|LINE|L1 -36129 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr11-3905 chr11 117121434 117121644 + 14.0 0.000 Intergenic Intergenic -22745 NM_001184748 5049 Hs.728488 NM_002572 ENSG00000168092 PAFAH1B2 HEL-S-303 platelet activating factor acetylhydrolase 1b catalytic subunit 2 protein-coding chr8-380 chr8 143976582 143976792 + 14.0 0.000 promoter-TSS (NM_000445) promoter-TSS (NM_000445) 58 NM_000445 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr22-919 chr22 36471497 36471707 + 14.0 0.000 intron (NM_012473, intron 3 of 3) MIRb|SINE|MIR 10038 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr2-3349 chr2 219530129 219530339 + 14.0 0.000 intron (NM_018674, intron 1 of 9) intron (NM_018674, intron 1 of 9) 12863 NM_001195731 79586 Hs.516711 NM_024536 ENSG00000123989 CHPF CHSY2|CSS2 chondroitin polymerizing factor protein-coding chr17-1299 chr17 47492559 47492769 + 14.0 0.000 promoter-TSS (NR_033934) promoter-TSS (NR_033934) -44 NR_033934 653479 Hs.537279 NR_033934 MRPL45P2 - mitochondrial ribosomal protein L45 pseudogene 2 pseudo chr1-5739 chr1 97571968 97572178 + 14.0 0.000 intron (NM_000110, intron 11 of 22) intron (NM_000110, intron 11 of 22) -224848 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr16-1197 chr16 29821708 29821918 + 14.0 0.000 3' UTR (NM_024516, exon 3 of 3) 3' UTR (NM_024516, exon 3 of 3) 1351 NM_005115 9961 Hs.632177 NM_005115 ENSG00000013364 MVP LRP|VAULT1 major vault protein protein-coding chr5-1154 chr5 169742911 169743121 + 14.0 0.000 intron (NR_156756, intron 22 of 52) intron (NR_156756, intron 22 of 52) 105741 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr19-1083 chr19 13765109 13765319 + 14.0 0.000 intron (NM_001329572, intron 2 of 5) MIR|SINE|MIR 692 NM_001031727 84245 Hs.439370 NM_032285 ENSG00000037757 MRI1 M1Pi|MRDI|MTNA|Ypr118w methylthioribose-1-phosphate isomerase 1 protein-coding chr10-3251 chr10 123945603 123945813 + 14.0 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -53901 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr2-1796 chr2 25675972 25676182 + 14.0 0.000 Intergenic L2|LINE|L2 -2403 NM_001256304 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr11-1738 chr11 114296139 114296349 + 14.0 0.000 5' UTR (NM_006169, exon 1 of 3) 5' UTR (NM_006169, exon 1 of 3) 431 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr21-237 chr21 43276884 43277094 + 14.0 0.000 Intergenic Intergenic 55050 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr3-1090 chr3 196968654 196968864 + 14.0 0.000 promoter-TSS (NM_025163) promoter-TSS (NM_025163) 74 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding chr8-1300 chr8 80122230 80122440 + 14.0 0.000 intron (NR_105035, intron 1 of 6) MER51D|LTR|ERV1 -41504 NM_001287142 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr14-443 chr14 49598971 49599181 + 14.0 0.000 promoter-TSS (NM_001351375) promoter-TSS (NM_001351375) 136 NM_152329 122769 Hs.451090 NM_152329 ENSG00000165501 LRR1 4-1BBLRR|LRR-1|PPIL5 leucine rich repeat protein 1 protein-coding chr1-7023 chr1 171255001 171255211 + 14.0 0.000 intron (NM_001282694, intron 1 of 7) L3|LINE|CR1 -2817 NM_001282692 2326 Hs.1424 NM_002021 ENSG00000010932 FMO1 - flavin containing dimethylaniline monoxygenase 1 protein-coding chr12-1057 chr12 108526983 108527193 + 14.0 0.000 intron (NM_014706, intron 15 of 18) intron (NM_014706, intron 15 of 18) 11811 NM_007076 11153 Hs.661891 NM_007076 ENSG00000198855 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding chr13-1211 chr13 54693144 54693354 + 14.0 0.000 Intergenic MER52-int|LTR|ERV1 -381201 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr20-567 chr20 11455053 11455263 + 14.0 0.000 Intergenic Intergenic -181775 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr2-4587 chr2 98960570 98960780 + 14.0 0.000 Intergenic Intergenic -24450 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr15-1025 chr15 90425915 90426125 + 14.0 0.000 intron (NM_003870, intron 2 of 37) intron (NM_003870, intron 2 of 37) 37778 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr2-2756 chr2 203061418 203061628 + 14.0 0.000 intron (NM_001114132, intron 6 of 54) intron (NM_001114132, intron 6 of 54) 46644 NM_001114132 65065 Hs.648846 NM_198945 ENSG00000144426 NBEAL1 A530083I02Rik|ALS2CR16|ALS2CR17 neurobeachin like 1 protein-coding chr3-2189 chr3 4738757 4738967 + 14.0 0.000 intron (NM_001168272, intron 43 of 60) intron (NM_001168272, intron 43 of 60) 12728 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr1-2159 chr1 22862113 22862323 + 14.0 0.000 TTS (NR_036214) TTS (NR_036214) 1008 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr2-1428 chr2 197705208 197705418 + 14.0 0.000 promoter-TSS (NM_138395) promoter-TSS (NM_138395) -56 NM_138395 92935 Hs.744330 NM_138395 ENSG00000247626 MARS2 COXPD25|MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding chr11-2533 chr11 76830633 76830843 + 14.0 0.000 Intergenic MIRb|SINE|MIR -30180 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr4-1836 chr4 118282119 118282329 + 14.0 0.000 exon (NM_003619, exon 13 of 13) exon (NM_003619, exon 13 of 13) 3034 NR_002963 677809 Hs.744742 NR_002963 ENSG00000275994 SNORA24 ACA24|SNORA24A small nucleolar RNA, H/ACA box 24 snoRNA chr2-3108 chr2 146481761 146481971 + 14.0 0.000 Intergenic Intergenic -105191 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-936 chr2 168456036 168456246 + 14.0 0.000 promoter-TSS (NM_203463) promoter-TSS (NM_203463) -131 NM_203463 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr10-2500 chr10 35387770 35387980 + 14.0 0.000 intron (NM_001282852, intron 1 of 8) intron (NM_001282852, intron 1 of 8) 51001 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr2-1902 chr2 144705625 144705835 + 14.0 0.000 intron (NR_033870, intron 1 of 4) intron (NR_033870, intron 1 of 4) 37763 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr22-800 chr22 20456380 20456590 + 14.0 0.000 intron (NR_033825, intron 4 of 5) intron (NR_033825, intron 4 of 5) -18660 NM_153334 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chr1-1908 chr1 207620301 207620511 + 14.0 0.000 intron (NM_000573, intron 35 of 38) intron (NM_000573, intron 35 of 38) -24727 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr3-2393 chr3 184336896 184337106 + 14.0 0.000 promoter-TSS (NM_144635) promoter-TSS (NM_144635) -599 NM_144635 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr21-467 chr21 42514475 42514685 + 14.0 0.000 5' UTR (NM_001320537, exon 1 of 20) 5' UTR (NM_001320537, exon 1 of 20) 728 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr15-1070 chr15 90000609 90000819 + 14.0 0.000 promoter-TSS (NM_198526) promoter-TSS (NM_198526) -610 NM_198526 374655 Hs.459311 NM_198526 ENSG00000140548 ZNF710 - zinc finger protein 710 protein-coding chr6-644 chr6 142416241 142416451 + 14.0 0.000 intron (NM_198569, intron 20 of 24) intron (NM_198569, intron 20 of 24) 114339 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr10-1355 chr10 114584307 114584517 + 14.0 0.000 intron (NM_001352440, intron 2 of 20) MamRep434|DNA|TcMar-Tigger 29324 NM_001352442 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr8-1201 chr8 66925475 66925685 + 14.0 0.000 promoter-TSS (NR_152598) promoter-TSS (NR_152598) -39 NR_152598 641638 Hs.372680 NR_002599 ENSG00000245910 SNHG6 HBII-276HG|NCRNA00058|U87HG small nucleolar RNA host gene 6 ncRNA chr2-2963 chr2 28674255 28674465 + 14.0 0.000 Intergenic Intergenic 61845 NR_145832 100505774 Hs.595909 NR_145832 ENSG00000226833 LOC100505774 - uncharacterized LOC100505774 ncRNA chr2-2957 chr2 25522235 25522445 + 14.0 0.000 intron (NM_033147, intron 9 of 19) intron (NM_033147, intron 9 of 19) 127882 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr3-1758 chr3 185900271 185900481 + 14.0 0.000 Intergenic Intergenic 37638 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr1-3212 chr1 171486115 171486325 + 14.0 0.000 intron (NM_015172, intron 1 of 33) intron (NM_015172, intron 1 of 33) 690 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding chr2-1505 chr2 24360313 24360523 + 14.0 0.000 5' UTR (NM_001348186, exon 1 of 29) 5' UTR (NM_001348186, exon 1 of 29) 118 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr22-821 chr22 21100788 21100998 + 14.0 0.000 Intergenic Intergenic -2123 NR_037566 400892 Hs.745077 NM_207474 BCRP2 BCR-2|BCR2|BCRL2 BCR pseudogene 2 pseudo chr3-2251 chr3 49839242 49839452 + 14.0 0.000 intron (NM_005879, intron 10 of 14) intron (NM_005879, intron 10 of 14) 17217 NM_005879 10293 Hs.517972 NM_005879 ENSG00000183763 TRAIP RNF206|SCKL9|TRIP TRAF interacting protein protein-coding chr10-1818 chr10 131932905 131933115 + 14.0 0.000 intron (NM_001291310, intron 3 of 9) intron (NM_001291310, intron 3 of 9) 32002 NM_001291310 55844 Hs.380372 NM_018461 ENSG00000175470 PPP2R2D B55D|B55delta|MDS026 protein phosphatase 2 regulatory subunit Bdelta protein-coding chr10-2363 chr10 93235756 93235966 + 14.0 0.000 Intergenic Intergenic 161968 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr1-9698 chr1 51927891 51928101 + 14.0 0.000 intron (NM_002867, intron 4 of 4) intron (NM_002867, intron 4 of 4) -49059 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr17-1052 chr17 1562574 1562784 + 14.0 0.000 5' UTR (NM_006224, exon 1 of 12) 5' UTR (NM_006224, exon 1 of 12) 113 NM_006224 5306 Hs.429819 NM_006224 ENSG00000174238 PITPNA HEL-S-36|PI-TPalpha|PITPN|VIB1A phosphatidylinositol transfer protein alpha protein-coding chr17-1782 chr17 56780385 56780595 + 14.0 0.000 Intergenic CpG 53430 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr4-897 chr4 25234689 25234899 + 14.0 0.000 intron (NM_018323, intron 1 of 9) intron (NM_018323, intron 1 of 9) 761 NM_018323 55300 Hs.191701 NM_018323 ENSG00000038210 PI4K2B PI4KIIB|PIK42B phosphatidylinositol 4-kinase type 2 beta protein-coding chr1-2438 chr1 17588292 17588502 + 14.0 0.000 intron (NR_137287, intron 3 of 29) intron (NR_137287, intron 3 of 29) 7844 NM_001011722 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr13-432 chr13 72839869 72840079 + 14.0 0.000 intron (NR_146206, intron 9 of 16) intron (NR_146206, intron 9 of 16) 57841 NR_146206 10464 Hs.441926 NM_006346 ENSG00000083535 PIBF1 C13orf24|CEP90|JBTS33|PIBF progesterone immunomodulatory binding factor 1 protein-coding chr6-1864 chr6 53309097 53309307 + 14.0 0.000 intron (NM_001242830, intron 1 of 6) L2b|LINE|L2 28415 NR_046241 647190 Hs.520189 NR_046241 RPS16P5 RPS16_3_702 ribosomal protein S16 pseudogene 5 pseudo chr3-1487 chr3 107957149 107957359 + 14.0 0.000 Intergenic Intergenic 74049 NR_015394 285205 Hs.134882 NR_015394 ENSG00000240423 LINC00636 - long intergenic non-protein coding RNA 636 ncRNA chr15-770 chr15 94231133 94231343 + 14.0 0.000 Intergenic Intergenic -66963 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr17-1343 chr17 40344333 40344543 + 14.0 0.000 intron (NM_001024809, intron 1 of 7) intron (NM_001024809, intron 1 of 7) -1302 NR_110861 101929693 Hs.655717 NR_110861 ENSG00000265666 RARA-AS1 - RARA antisense RNA 1 ncRNA chr1-2933 chr1 46137955 46138165 + 14.0 0.000 intron (NR_125987, intron 2 of 2) intron (NR_125987, intron 2 of 2) 4689 NR_125987 101929626 Hs.534951 NR_125987 ENSG00000227857 LOC101929626 - uncharacterized LOC101929626 ncRNA chr20-1474 chr20 3659045 3659255 + 14.0 0.000 TTS (NM_145762) TTS (NM_145762) 4249 NM_022139 64096 Hs.302025 NM_022139 ENSG00000125861 GFRA4 - GDNF family receptor alpha 4 protein-coding chr12-2404 chr12 46209302 46209512 + 14.0 0.000 intron (NM_030674, intron 5 of 16) intron (NM_030674, intron 5 of 16) 57109 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr1-2777 chr1 158020974 158021184 + 14.0 0.000 intron (NM_001286349, intron 1 of 12) intron (NM_001286349, intron 1 of 12) -4471 NR_145471 100505785 Hs.664656 NR_145471 KIRREL1-IT1 KIRREL-IT1 KIRREL1 intronic transcript 1 ncRNA chr4-1709 chr4 176475168 176475378 + 14.0 0.000 Intergenic L1MA9|LINE|L1 155307 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr15-992 chr15 65796702 65796912 + 14.0 0.000 Intergenic Intergenic -4514 NM_001320835 10260 Hs.654567 NM_005848 ENSG00000174485 DENND4A IRLB|MYCPBP DENN domain containing 4A protein-coding chr2-2816 chr2 56801878 56802088 + 14.0 0.000 Intergenic Intergenic -616213 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr19-1747 chr19 2392869 2393079 + 14.0 0.000 intron (NM_182973, intron 1 of 16) LTR12C|LTR|ERV1 3203 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr4-1007 chr4 1131427 1131637 + 14.0 0.000 intron (NR_134676, intron 1 of 2) intron (NR_134676, intron 1 of 2) -8368 NR_033768 100379220 Hs.635208 NR_033768 ENSG00000215367 TMED11P p24a1|p24alpha1 transmembrane p24 trafficking protein 11, pseudogene pseudo chr2-3080 chr2 110866881 110867091 + 14.0 0.000 intron (NM_001371254, intron 10 of 18) intron (NM_001371254, intron 10 of 18) 134413 NM_001371254 chr22-737 chr22 43250499 43250709 + 14.0 0.000 intron (NM_173050, intron 6 of 21) intron (NM_173050, intron 6 of 21) -25338 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr2-2258 chr2 239029222 239029432 + 14.0 0.000 Intergenic MER3|DNA|hAT-Charlie 39587 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr6-1777 chr6 84897827 84898037 + 14.0 0.000 Intergenic Intergenic -133334 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box transcription factor 18 protein-coding chr7-2000 chr7 16027585 16027795 + 14.0 0.000 Intergenic Intergenic -182796 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr14-2098 chr14 73137571 73137781 + 14.0 0.000 intron (NM_000021, intron 1 of 11) intron (NM_000021, intron 1 of 11) 1169 NM_000021 5663 Hs.3260 NM_000021 ENSG00000080815 PSEN1 ACNINV3|AD3|FAD|PS-1|PS1|S182 presenilin 1 protein-coding chr7-1094 chr7 2474423 2474633 + 14.0 0.000 TTS (NM_001291784) TTS (NM_001291784) 1855 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr7-1636 chr7 30789412 30789622 + 14.0 0.000 intron (NR_037598, intron 6 of 19) intron (NR_037598, intron 6 of 19) 18100 NM_032222 84182 Hs.660192 NM_032222 ENSG00000106125 MINDY4 AQP-1|AQP1|C7orf67|CHIP28|FAM188B MINDY lysine 48 deubiquitinase 4 protein-coding chr19-3725 chr19 42578185 42578395 + 14.0 0.000 intron (NR_073180, intron 2 of 2) intron (NR_073180, intron 2 of 2) 16634 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr4-1607 chr4 40841070 40841280 + 14.0 0.000 intron (NM_001166051, intron 1 of 6) intron (NM_001166051, intron 1 of 6) 15980 NM_001166051 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr12-1871 chr12 53187545 53187755 + 14.0 0.000 3' UTR (NM_001004304, exon 7 of 7) 3' UTR (NM_001004304, exon 7 of 7) -6725 NM_001244705 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr18-567 chr18 45248576 45248786 + 14.0 0.000 intron (NM_001371319, intron 4 of 23) intron (NM_001371319, intron 4 of 23) 35686 NM_001242692 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr2-3101 chr2 135904625 135904835 + 14.0 0.000 Intergenic Intergenic -28287 NM_005915 4175 Hs.444118 NM_005915 ENSG00000076003 MCM6 MCG40308|Mis5|P105MCM minichromosome maintenance complex component 6 protein-coding chr1-3783 chr1 8169406 8169616 + 14.0 0.000 Intergenic Intergenic -39161 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr7-2070 chr7 140771859 140772069 + 14.0 0.000 intron (NR_148928, intron 14 of 17) intron (NR_148928, intron 14 of 17) -74887 NR_024454 100134713 Hs.534141 NR_024454 ENSG00000240889 NDUFB2-AS1 - NDUFB2 antisense RNA 1 ncRNA chr8-1471 chr8 23288703 23288913 + 14.0 0.000 intron (NR_125897, intron 2 of 8) intron (NR_125897, intron 2 of 8) 700 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr15-1580 chr15 75397451 75397661 + 14.0 0.000 intron (NM_015477, intron 12 of 20) MLT1I|LTR|ERVL-MaLR -28929 NM_001256496 4123 Hs.26232 NM_006715 ENSG00000140400 MAN2C1 MAN6A8|MANA|MANA1 mannosidase alpha class 2C member 1 protein-coding chr11-5328 chr11 58936644 58936854 + 14.0 0.000 intron (NR_033853, intron 5 of 5) intron (NR_033853, intron 5 of 5) -6500 NM_001220496 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr6-651 chr6 27388588 27388798 + 14.0 0.000 promoter-TSS (NM_001322289) promoter-TSS (NM_001322289) -25 NM_001322293 346157 Hs.651176 NM_001013719 ENSG00000124613 ZNF391 dJ153G14.3 zinc finger protein 391 protein-coding chr1-3967 chr1 151443916 151444126 + 14.0 0.000 intron (NM_001194938, intron 1 of 17) MER119|DNA|hAT-Charlie -1816 NM_207171 23126 Hs.489873 NM_015100 ENSG00000143442 POGZ MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m pogo transposable element derived with ZNF domain protein-coding chr11-3790 chr11 64099980 64100190 + 14.0 0.000 intron (NM_014067, intron 3 of 10) MIRc|SINE|MIR -3805 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr9-1518 chr9 108440228 108440438 + 14.0 0.000 Intergenic Intergenic 415653 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr15-2048 chr15 56160890 56161100 + 14.0 0.000 intron (NM_001368073, intron 2 of 8) intron (NM_001368073, intron 2 of 8) 28937 NM_001368074 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr6-1969 chr6 147268364 147268574 + 14.0 0.000 intron (NM_139244, intron 7 of 25) intron (NM_139244, intron 7 of 25) -63855 NR_034115 729178 Hs.557608 NR_034115 STXBP5-AS1 - STXBP5 antisense RNA 1 ncRNA chr8-1522 chr8 86428893 86429103 + 14.0 0.000 intron (NM_007013, intron 11 of 24) MLT1J|LTR|ERVL-MaLR 79688 NM_016033 51115 Hs.145386 NM_016033 ENSG00000176623 RMDN1 CGI-90|FAM82B|RMD-1|RMD1 regulator of microtubule dynamics 1 protein-coding chr8-1449 chr8 142527568 142527778 + 14.0 0.000 intron (NM_001702, intron 24 of 30) intron (NM_001702, intron 24 of 30) 78024 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr20-1127 chr20 32510701 32510911 + 14.0 0.000 intron (NR_110619, intron 1 of 2) intron (NR_110619, intron 1 of 2) 847 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr7-358 chr7 2403401 2403611 + 14.0 0.000 promoter-TSS (NM_018641) promoter-TSS (NM_018641) -105 NM_001243794 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr7-956 chr7 152436746 152436956 + 14.0 0.000 promoter-TSS (NM_170606) promoter-TSS (NM_170606) -44 NR_002935 220832 Hs.647108 NR_002935 ENSG00000241735 FABP5P3 FABP5L3 fatty acid binding protein 5 pseudogene 3 pseudo chr3-1878 chr3 129323981 129324191 + 14.0 0.000 intron (NR_026991, intron 4 of 4) intron (NR_026991, intron 4 of 4) -7800 NM_006026 8971 Hs.75307 NM_006026 ENSG00000184897 H1FX H1.10|H1X H1 histone family member X protein-coding chr12-969 chr12 11878005 11878215 + 14.0 0.000 intron (NM_001987, intron 5 of 7) intron (NM_001987, intron 5 of 7) -171751 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr1-4351 chr1 84479577 84479787 + 14.0 0.000 intron (NM_025065, intron 1 of 8) intron (NM_025065, intron 1 of 8) 416 NM_025065 80135 Hs.481202 NM_025065 ENSG00000117133 RPF1 BXDC5 ribosome production factor 1 homolog protein-coding chr7-1335 chr7 11193624 11193834 + 14.0 0.000 Intergenic Intergenic 219857 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr8-1796 chr8 98398499 98398709 + 14.0 0.000 Intergenic Intergenic -4866 NR_162095 113218497 NR_162095 MIR9903 - microRNA 9903 ncRNA chr10-1354 chr10 114103374 114103584 + 14.0 0.000 Intergenic Intergenic 59613 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr16-997 chr16 10942265 10942475 + 14.0 0.000 promoter-TSS (NM_014015) promoter-TSS (NM_014015) 98 NM_014015 28955 Hs.592051 NM_014015 ENSG00000182108 DEXI MYLE Dexi homolog protein-coding chr6-1077 chr6 42158034 42158244 + 14.0 0.000 intron (NM_001319062, intron 1 of 4) intron (NM_001319062, intron 1 of 4) 2733 NM_001370581 114841037 Hs.92858 NM_001370581 LOC114841037 - Uncharacterized protein 114841037 protein-coding chr20-679 chr20 43694897 43695107 + 14.0 0.000 intron (NM_001278610, intron 5 of 12) intron (NM_001278610, intron 5 of 12) 27888 NM_002466 4605 Hs.179718 NM_002466 ENSG00000101057 MYBL2 B-MYB|BMYB MYB proto-oncogene like 2 protein-coding chr18-632 chr18 21264665 21264875 + 14.0 0.000 intron (NM_001142966, intron 1 of 32) intron (NM_001142966, intron 1 of 32) 22528 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chrX-859 chrX 136346639 136346849 + 14.0 0.000 exon (NM_153834, exon 6 of 26) exon (NM_153834, exon 6 of 26) 45781 NM_153834 139378 Hs.381354 NM_153834 ENSG00000156920 ADGRG4 GPR112|PGR17|RP1-299I16 adhesion G protein-coupled receptor G4 protein-coding chr11-2077 chr11 84923059 84923269 + 14.0 0.000 5' UTR (NM_001364, exon 1 of 23) 5' UTR (NM_001364, exon 1 of 23) 257 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr7-3610 chr7 32490959 32491169 + 14.0 0.000 promoter-TSS (NM_012322) promoter-TSS (NM_012322) -684 NR_024466 23658 Hs.424908 NM_012322 ENSG00000106355 LSM5 YER146W LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr1-3271 chr1 221718357 221718567 + 14.0 0.000 intron (NR_111940, intron 1 of 2) intron (NR_111940, intron 1 of 2) 18438 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr10-1698 chr10 28735062 28735272 + 14.0 0.000 Intergenic Intergenic -8483 NR_120652 101929218 Hs.224866 NR_120652 LINC01517 - long intergenic non-protein coding RNA 1517 ncRNA chr15-1052 chr15 58957352 58957562 + 14.0 0.000 Intergenic MER20|DNA|hAT-Charlie -23778 NM_024755 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr11-1528 chr11 121961322 121961532 + 14.0 0.000 Intergenic Intergenic 138417 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr8-1684 chr8 53523783 53523993 + 14.0 0.000 promoter-TSS (NR_149032) promoter-TSS (NR_149032) 77 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr7-1740 chr7 28298904 28299114 + 14.0 0.000 promoter-TSS (NM_182899) promoter-TSS (NM_182899) -312 NM_182899 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr6-1869 chr6 69669921 69670131 + 14.0 0.000 Intergenic Intergenic 126440 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr13-426 chr13 41061530 41061740 + 14.0 0.000 promoter-TSS (NM_001370330) promoter-TSS (NM_001370330) 126 NM_007187 11193 Hs.411300 NM_007187 ENSG00000120688 WBP4 FBP21 WW domain binding protein 4 protein-coding chr18-560 chr18 7696681 7696891 + 14.0 0.000 intron (NM_002845, intron 1 of 30) intron (NM_002845, intron 1 of 30) 129470 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr9-4570 chr9 89826220 89826430 + 14.0 0.000 Intergenic LTR67B|LTR|ERVL -143091 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr11-1206 chr11 1442799 1443009 + 14.0 0.000 intron (NM_003957, intron 5 of 19) intron (NM_003957, intron 5 of 19) 31752 NM_001256630 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr12-4680 chr12 48035945 48036155 + 14.0 0.000 Intergenic L2c|LINE|L2 -31574 NM_033150 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr19-1837 chr19 6674860 6675070 + 14.0 0.000 Intergenic Intergenic -4377 NM_003807 8740 Hs.129708 NM_003807 ENSG00000125735 TNFSF14 CD258|HVEML|LIGHT|LTg TNF superfamily member 14 protein-coding chr20-806 chr20 21353343 21353553 + 14.0 0.000 intron (NM_001317960, intron 20 of 29) intron (NM_001317960, intron 20 of 29) 44078 NM_033176 644524 NM_033176 ENSG00000125816 NKX2-4 NKX2.4|NKX2D NK2 homeobox 4 protein-coding chr15-2715 chr15 90757292 90757502 + 14.0 0.000 intron (NM_001287246, intron 6 of 22) L3|LINE|CR1 40051 NM_001287248 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|MGRISCE1|RECQ2|RECQL2|RECQL3 BLM RecQ like helicase protein-coding chr12-2014 chr12 40959094 40959304 + 14.0 0.000 exon (NM_175038, exon 13 of 22) exon (NM_175038, exon 13 of 22) 50842 NM_175038 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr20-1015 chr20 6566990 6567200 + 14.0 0.000 Intergenic Intergenic 140363 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr19-2340 chr19 45280455 45280665 + 14.0 0.000 intron (NM_001199867, intron 11 of 16) intron (NM_001199867, intron 11 of 16) 29289 NM_001199867 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr7-2066 chr7 137923374 137923584 + 14.0 0.000 intron (NM_001318246, intron 2 of 11) intron (NM_001318246, intron 2 of 11) 9509 NM_001318246 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr1-2278 chr1 235908974 235909184 + 14.0 0.000 Intergenic Intergenic -25366 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr5-2715 chr5 109143268 109143478 + 14.0 0.000 intron (NR_146155, intron 17 of 19) intron (NR_146155, intron 17 of 19) 182996 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr1-6108 chr1 151437683 151437893 + 14.0 0.000 intron (NM_001194938, intron 2 of 17) intron (NM_001194938, intron 2 of 17) 4417 NM_207171 23126 Hs.489873 NM_015100 ENSG00000143442 POGZ MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m pogo transposable element derived with ZNF domain protein-coding chr1-3706 chr1 204294448 204294658 + 14.0 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 65376 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr2-1763 chr2 129877571 129877781 + 14.0 0.000 promoter-TSS (NR_149127) promoter-TSS (NR_149127) -185 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr1-1817 chr1 214551777 214551987 + 14.0 0.000 promoter-TSS (NM_005401) promoter-TSS (NM_005401) -280 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr2-4383 chr2 38034090 38034300 + 14.0 0.000 intron (NR_102712, intron 1 of 3) intron (NR_102712, intron 1 of 3) 2146 NR_102712 101410544 Hs.591566 NR_102712 RMDN2-AS1 - RMDN2 antisense RNA 1 ncRNA chr19-1408 chr19 44747418 44747628 + 14.0 0.000 Intergenic Intergenic -1185 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr16-2671 chr16 67632232 67632442 + 14.0 0.000 intron (NM_006565, intron 10 of 11) intron (NM_006565, intron 10 of 11) -12807 NM_001013838 146206 Hs.611432 NM_001013838 ENSG00000159753 CARMIL2 CARMIL2b|IMD58|LRRC16C|RLTPR capping protein regulator and myosin 1 linker 2 protein-coding chr7-1834 chr7 130912154 130912364 + 14.0 0.000 intron (NR_110472, intron 1 of 3) intron (NR_110472, intron 1 of 3) 1051 NR_110473 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr4-1261 chr4 24850880 24851090 + 14.0 0.000 intron (NM_001130726, intron 4 of 11) intron (NM_001130726, intron 4 of 11) 55412 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr13-1676 chr13 76035758 76035968 + 14.0 0.000 Intergenic Intergenic -100731 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr17-1660 chr17 67995878 67996088 + 14.0 0.000 Intergenic Intergenic -2377 NM_181656 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr1-5549 chr1 227746035 227746245 + 14.0 0.000 intron (NM_001323931, intron 2 of 5) intron (NM_001323931, intron 2 of 5) 10445 NM_001323934 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr11-1813 chr11 3747725 3747935 + 14.0 0.000 intron (NR_157590, intron 11 of 31) intron (NR_157590, intron 11 of 31) 49716 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chr18-1601 chr18 42502828 42503038 + 14.0 0.000 intron (NR_046174, intron 6 of 9) L1MEd|LINE|L1 316265 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr17-2173 chr17 55238515 55238725 + 14.0 0.000 Intergenic CpG -26340 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr6-383 chr6 33789011 33789221 + 14.0 0.000 promoter-TSS (NM_001348709) promoter-TSS (NM_001348709) 14 NM_001348710 221496 Hs.444845 NM_181336 ENSG00000161904 LEMD2 CTRCT42|LEM2|NET25|dJ482C21.1 LEM domain containing 2 protein-coding chr1-4513 chr1 31736895 31737105 + 14.0 0.000 intron (NM_001294335, intron 20 of 32) intron (NM_001294335, intron 20 of 32) 21735 NR_036216 100423028 NR_036216 ENSG00000266580 MIR4254 - microRNA 4254 ncRNA chr9-1422 chr9 129168063 129168273 + 14.0 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 10093 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr12-3238 chr12 57753681 57753891 + 14.0 0.000 Intergenic Intergenic -1317 NM_138396 92979 Hs.632709 NM_138396 ENSG00000139266 MARCH9 MARCH-IX|RNF179 membrane associated ring-CH-type finger 9 protein-coding chr3-1351 chr3 156673976 156674186 + 14.0 0.000 promoter-TSS (NM_001184717) promoter-TSS (NM_001184717) -509 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr15-468 chr15 64895695 64895905 + 14.0 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -16102 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr7-1090 chr7 139826115 139826325 + 14.0 0.000 intron (NM_001166254, intron 3 of 14) intron (NM_001166254, intron 3 of 14) -3044 NM_001061 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr17-1344 chr17 41812671 41812881 + 14.0 0.000 promoter-TSS (NM_021939) promoter-TSS (NM_021939) 66 NM_021939 60681 Hs.463035 NM_021939 ENSG00000141756 FKBP10 BRKS1|FKBP65|OI11|OI6|PPIASE|hFKBP65 FKBP prolyl isomerase 10 protein-coding chr10-4872 chr10 16792766 16792976 + 14.0 0.000 intron (NM_152724, intron 1 of 7) intron (NM_152724, intron 1 of 7) 24553 NM_012425 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr6-490 chr6 33634283 33634493 + 14.0 0.000 promoter-TSS (NR_134628) promoter-TSS (NR_134628) -643 NR_134628 101929188 Hs.658327 NR_134628 LOC101929188 - uncharacterized LOC101929188 ncRNA chr7-1299 chr7 47326351 47326561 + 14.0 0.000 intron (NM_022748, intron 20 of 30) intron (NM_022748, intron 20 of 30) 138347 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr6-1599 chr6 37608065 37608275 + 14.0 0.000 Intergenic L1MD2|LINE|L1 -52748 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr4-943 chr4 122922750 122922960 + 14.0 0.000 promoter-TSS (NM_145207) promoter-TSS (NM_145207) 113 NM_198041 11162 Hs.558459 NM_007083 ENSG00000170917 NUDT6 ASFGF2|FGF-AS|FGF2AS|GFG-1|GFG1 nudix hydrolase 6 protein-coding chr3-1448 chr3 42072220 42072430 + 14.0 0.000 Intergenic Intergenic -14875 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr16-1498 chr16 10039384 10039594 + 14.0 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 142578 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr10-3680 chr10 103194039 103194249 + 14.0 0.000 promoter-TSS (NM_001351181) promoter-TSS (NM_001351181) -838 NM_001351187 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr17-3600 chr17 82655795 82656005 + 14.0 0.000 3' UTR (NM_006822, exon 6 of 6) 3' UTR (NM_006822, exon 6 of 6) -7456 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr7-2191 chr7 95011573 95011783 + 14.0 0.000 intron (NM_017650, intron 2 of 15) intron (NM_017650, intron 2 of 15) 101780 NM_001166162 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr2-1618 chr2 224412163 224412373 + 14.0 0.000 Intergenic Intergenic -10161 NM_001122779 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr4-2038 chr4 7487687 7487897 + 14.0 0.000 intron (NM_020777, intron 2 of 26) intron (NM_020777, intron 2 of 26) 27764 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr10-1984 chr10 34894057 34894267 + 14.0 0.000 Intergenic Intergenic 78394 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr9-2792 chr9 116823292 116823502 + 14.0 0.000 intron (NM_014010, intron 10 of 21) intron (NM_014010, intron 10 of 21) 136092 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr2-3243 chr2 236117311 236117521 + 14.0 0.000 intron (NM_001037131, intron 16 of 17) intron (NM_001037131, intron 16 of 17) 50970 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr6-1733 chr6 41878972 41879182 + 14.0 0.000 intron (NM_018561, intron 2 of 6) intron (NM_018561, intron 2 of 6) -7440 NM_001286554 25862 Hs.593575 NM_018561 ENSG00000164663 USP49 - ubiquitin specific peptidase 49 protein-coding chr10-3616 chr10 94001204 94001414 + 14.0 0.000 intron (NM_001288989, intron 1 of 32) intron (NM_001288989, intron 1 of 32) 7378 NM_001288989 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr1-4034 chr1 200379555 200379765 + 14.0 0.000 Intergenic Intergenic -5868 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr17-1412 chr17 77124510 77124720 + 14.0 0.000 intron (NM_001204410, intron 2 of 17) intron (NM_001204410, intron 2 of 17) -16354 NM_003003 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr20-260 chr20 35277591 35277801 + 14.0 0.000 TTS (NM_006690) TTS (NM_006690) 426 NM_001355004 101410538 Hs.356273 NM_001355003 ENSG00000126005 MMP24OS MMP24-AS1 MMP24 opposite strand protein-coding chr3-1265 chr3 185658653 185658863 + 14.0 0.000 intron (NR_138486, intron 9 of 15) intron (NR_138486, intron 9 of 15) -54494 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr11-531 chr11 62612833 62613043 + 14.0 0.000 promoter-TSS (NM_001300793) promoter-TSS (NM_001300793) -163 NM_153265 256364 Hs.379785 NM_153265 ENSG00000149499 EML3 ELP95|EMAP3|EMAP95 EMAP like 3 protein-coding chr5-884 chr5 77077134 77077344 + 14.0 0.000 exon (NM_032367, exon 3 of 3) exon (NM_032367, exon 3 of 3) 3332 NR_003014 677828 Hs.693249 NR_003014 ENSG00000238961 SNORA47 HBI-115 small nucleolar RNA, H/ACA box 47 snoRNA chr17-2614 chr17 82790698 82790908 + 14.0 0.000 intron (NM_005993, intron 7 of 38) intron (NM_005993, intron 7 of 38) 38738 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr6-1314 chr6 6752205 6752415 + 14.0 0.000 Intergenic Intergenic -129484 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr2-4172 chr2 185919253 185919463 + 14.0 0.000 Intergenic L1PA16|LINE|L1 -119207 NR_144454 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA chr19-1579 chr19 5773803 5774013 + 14.0 0.000 intron (NM_152784, intron 20 of 21) intron (NM_152784, intron 20 of 21) 10838 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chrX-223 chrX 130120930 130121140 + 14.0 0.000 Intergenic CpG -10144 NM_001127197 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr11-5175 chr11 6444551 6444761 + 14.0 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -3669 NM_000613 3263 Hs.426485 NM_000613 ENSG00000110169 HPX HX hemopexin protein-coding chr13-2727 chr13 94915150 94915360 + 14.0 0.000 intron (NR_110754, intron 3 of 4) intron (NR_110754, intron 3 of 4) -44786 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr16-578 chr16 89721691 89721901 + 14.0 0.000 promoter-TSS (NM_004913) promoter-TSS (NM_004913) 259 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr20-435 chr20 50086843 50087053 + 14.0 0.000 intron (NM_022442, intron 2 of 3) AluY|SINE|Alu 26202 NM_001282577 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr19-1461 chr19 47130701 47130911 + 14.0 0.000 promoter-TSS (NR_027280) promoter-TSS (NR_027280) -29 NM_001145714 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr12-4528 chr12 25271652 25271862 + 14.0 0.000 Intergenic Intergenic -20828 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr4-2396 chr4 67588674 67588884 + 14.0 0.000 intron (NM_012108, intron 6 of 8) MIRb|SINE|MIR 30052 NM_012108 26228 Hs.435579 NM_012108 ENSG00000035720 STAP1 BRDG1|STAP-1 signal transducing adaptor family member 1 protein-coding chr3-1660 chr3 170027979 170028189 + 14.0 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -9911 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr7-1962 chr7 106278286 106278496 + 14.0 0.000 intron (NM_005746, intron 1 of 10) intron (NM_005746, intron 1 of 10) 6592 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr3-2293 chr3 110579892 110580102 + 14.0 0.000 Intergenic Intergenic 489962 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr19-1623 chr19 48819418 48819628 + 14.0 0.000 intron (NM_016246, intron 5 of 8) L2a|LINE|L2 -8494 NM_001284325 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr12-2280 chr12 110002276 110002486 + 14.0 0.000 intron (NM_033121, intron 1 of 14) AluSx|SINE|Alu 2951 NM_033121 88455 Hs.528703 NM_033121 ENSG00000076513 ANKRD13A ANKRD13|NY-REN-25 ankyrin repeat domain 13A protein-coding chr12-1387 chr12 95646747 95646957 + 14.0 0.000 Intergenic Intergenic -2403 NR_077225 100132594 Hs.676211 NR_077225 ENSG00000257150 PGAM1P5 - phosphoglycerate mutase 1 pseudogene 5 pseudo chr4-915 chr4 183443897 183444107 + 14.0 0.000 promoter-TSS (NM_017632) promoter-TSS (NM_017632) -634 NM_001317343 55602 Hs.592508 NM_017632 ENSG00000168564 CDKN2AIP CARF CDKN2A interacting protein protein-coding chr13-1196 chr13 49224239 49224449 + 14.0 0.000 Intergenic Intergenic 4006 NM_001507 2862 Hs.248126 NM_001507 ENSG00000102539 MLNR GPR38|MTLR1 motilin receptor protein-coding chr12-3446 chr12 113245837 113246047 + 14.0 0.000 intron (NM_001351347, intron 1 of 26) intron (NM_001351347, intron 1 of 26) 1574 NM_001351347 53373 Hs.524763 NM_017901 ENSG00000186815 TPCN1 TPC1 two pore segment channel 1 protein-coding chr15-937 chr15 78421482 78421692 + 14.0 0.000 Intergenic L2a|LINE|L2 -15844 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr1-1954 chr1 71660560 71660770 + 14.0 0.000 intron (NM_173808, intron 4 of 6) intron (NM_173808, intron 4 of 6) 176347 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr5-1929 chr5 177510163 177510373 + 14.0 0.000 promoter-TSS (NM_001308236) promoter-TSS (NM_001308236) 133 NM_001144875 79930 Hs.720849 NM_024872 ENSG00000146094 DOK3 DOKL docking protein 3 protein-coding chr11-1670 chr11 12138315 12138525 + 14.0 0.000 promoter-TSS (NM_001282665) promoter-TSS (NM_001282665) 30 NM_001282664 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr12-1958 chr12 114265781 114265991 + 14.0 0.000 Intergenic L2c|LINE|L2 -24116 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr10-3599 chr10 89515656 89515866 + 14.0 0.000 intron (NM_213606, intron 2 of 7) intron (NM_213606, intron 2 of 7) 19833 NM_213606 387700 Hs.530338 NM_213606 ENSG00000152779 SLC16A12 CJMG|CRT2|CTRCT47|MCT12 solute carrier family 16 member 12 protein-coding chr8-1786 chr8 90439925 90440135 + 14.0 0.000 Intergenic Intergenic 166033 NR_104062 101937451 Hs.583685 NR_104062 ENSG00000253799 LINC01030 - long intergenic non-protein coding RNA 1030 ncRNA chr10-1657 chr10 110323741 110323951 + 14.0 0.000 Intergenic Intergenic -18926 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr3-1729 chr3 117019104 117019314 + 14.0 0.000 Intergenic Intergenic 97778 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr22-590 chr22 50775167 50775377 + 14.0 0.000 intron (NM_001130921, intron 6 of 9) intron (NM_001130921, intron 6 of 9) 8364 NM_001350005 11158 Hs.446425 NM_007081 ENSG00000079974 RABL2B - RAB, member of RAS oncogene family like 2B protein-coding chr2-3343 chr2 216684006 216684216 + 14.0 0.000 intron (NM_000599, intron 1 of 3) intron (NM_000599, intron 1 of 3) 11438 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr1-1814 chr1 205313850 205314060 + 14.0 0.000 intron (NM_030952, intron 1 of 6) intron (NM_030952, intron 1 of 6) 7790 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr12-2191 chr12 10098964 10099174 + 14.0 0.000 promoter-TSS (NM_016511) promoter-TSS (NM_016511) -84 NM_001297748 51267 Hs.29549 NM_016511 ENSG00000150048 CLEC1A CLEC-1|CLEC1 C-type lectin domain family 1 member A protein-coding chr3-3410 chr3 86771667 86771877 + 14.0 0.000 Intergenic MER52D|LTR|ERV1 219377 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr16-2433 chr16 80905471 80905681 + 14.0 0.000 Intergenic MSTB|LTR|ERVL-MaLR -12980 NR_131947 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA chr11-2191 chr11 12676002 12676212 + 13.9 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 1686 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr17-2205 chr17 78915830 78916040 + 13.9 0.000 intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 9452 NM_003255 7077 Hs.633514 NM_003255 ENSG00000035862 TIMP2 CSC-21K|DDC8 TIMP metallopeptidase inhibitor 2 protein-coding chr4-565 chr4 144645833 144646043 + 13.9 0.000 promoter-TSS (NR_037595) promoter-TSS (NR_037595) 81 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA chr1-4620 chr1 156635046 156635256 + 13.9 0.000 Intergenic ERVL-E-int|LTR|ERVL -6966 NM_021948 63827 Hs.516904 NM_021948 ENSG00000132692 BCAN BEHAB|CSPG7 brevican protein-coding chr8-1566 chr8 123662016 123662226 + 13.9 0.000 Intergenic Intergenic -8320 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr21-631 chr21 45034146 45034356 + 13.9 0.000 Intergenic Intergenic -29524 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr2-3746 chr2 1642486 1642696 + 13.9 0.000 intron (NM_012293, intron 19 of 22) intron (NM_012293, intron 19 of 22) 101924 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr6-2054 chr6 97966561 97966771 + 13.9 0.000 Intergenic Intergenic -57865 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr13-1650 chr13 66520557 66520767 + 13.9 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) 302412 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr20-734 chr20 3781497 3781707 + 13.9 0.000 promoter-TSS (NM_015417) promoter-TSS (NM_015417) -154 NM_015417 25876 Hs.72620 NM_015417 ENSG00000101222 SPEF1 C20orf28|CLAMP|SPEF1A sperm flagellar 1 protein-coding chr8-1203 chr8 76894071 76894281 + 13.9 0.000 Intergenic Intergenic 72674 NR_130460 100422921 NR_130460 ENSG00000266712 MIR3149 - microRNA 3149 ncRNA chr5-1237 chr5 168295607 168295817 + 13.9 0.000 intron (NM_001161661, intron 1 of 22) intron (NM_001161661, intron 1 of 22) 4067 NM_001161661 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr11-3300 chr11 96521729 96521939 + 13.9 0.000 Intergenic L1PA13|LINE|L1 13409 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr22-1386 chr22 37395558 37395768 + 13.9 0.000 intron (NM_052906, intron 2 of 2) MIR3|SINE|MIR 31807 NR_110512 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr1-3955 chr1 112880982 112881192 + 13.9 0.000 promoter-TSS (NR_162120) promoter-TSS (NR_162120) -963 NR_162120 113218506 NR_162120 MIR11399 - microRNA 11399 ncRNA chr2-7173 chr2 204143853 204144063 + 13.9 0.000 Intergenic Intergenic 207210 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr2-1583 chr2 70123272 70123482 + 13.9 0.000 TTS (NR_024444) TTS (NR_024444) 1939 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr1-5088 chr1 110854432 110854642 + 13.9 0.000 Intergenic Intergenic -16662 NM_001040033 963 Hs.443057 NM_000560 ENSG00000143119 CD53 MOX44|TSPAN25 CD53 molecule protein-coding chr12-657 chr12 76559616 76559826 + 13.9 0.000 promoter-TSS (NM_001319652) promoter-TSS (NM_001319652) 50 NM_001319653 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr12-2291 chr12 112235457 112235667 + 13.9 0.000 exon (NM_001109662, exon 36 of 76) exon (NM_001109662, exon 36 of 76) -72241 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr1-3703 chr1 200699819 200700029 + 13.9 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -29926 NM_001349804 83479 Hs.497332 NM_031306 ENSG00000118197 DDX59 OFD5|ZNHIT5 DEAD-box helicase 59 protein-coding chr1-8311 chr1 46399021 46399231 + 13.9 0.000 intron (NM_001441, intron 1 of 14) intron (NM_001441, intron 1 of 14) 4809 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr16-1123 chr16 30570862 30571072 + 13.9 0.000 intron (NM_145271, intron 2 of 2) intron (NM_145271, intron 2 of 2) 1440 NM_001024683 146542 Hs.301463 NM_145271 ENSG00000229809 ZNF688 - zinc finger protein 688 protein-coding chr5-2535 chr5 169651040 169651250 + 13.9 0.000 intron (NR_156756, intron 1 of 52) intron (NR_156756, intron 1 of 52) 13870 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr7-2221 chr7 121214721 121214931 + 13.9 0.000 intron (NM_001105533, intron 15 of 17) intron (NM_001105533, intron 15 of 17) -110541 NM_016087 51384 Hs.272375 NM_016087 ENSG00000002745 WNT16 - Wnt family member 16 protein-coding chr7-942 chr7 74635626 74635836 + 13.9 0.000 Intergenic L1ME1|LINE|L1 -21934 NM_001280800 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr1-1846 chr1 21255335 21255545 + 13.9 0.000 intron (NM_001113347, intron 6 of 16) intron (NM_001113347, intron 6 of 16) 24175 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr7-1504 chr7 155257484 155257694 + 13.9 0.000 Intergenic Intergenic -40183 NM_001346590 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr22-536 chr22 42748150 42748360 + 13.9 0.000 Intergenic LTR26|LTR|ERV1 -26954 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr1-3027 chr1 1222102 1222312 + 13.9 0.000 intron (NM_016176, intron 4 of 6) intron (NM_016176, intron 4 of 6) -8054 NM_003327 7293 Hs.129780 NM_003327 ENSG00000186827 TNFRSF4 ACT35|CD134|IMD16|OX40|TXGP1L TNF receptor superfamily member 4 protein-coding chr1-3290 chr1 240191016 240191226 + 13.9 0.000 intron (NM_001348094, intron 4 of 14) intron (NM_001348094, intron 4 of 14) 99238 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr10-2573 chr10 71135275 71135485 + 13.9 0.000 Intergenic Intergenic -77190 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr3-2556 chr3 62318901 62319111 + 13.9 0.000 promoter-TSS (NM_001291942) promoter-TSS (NM_001291942) -16 NM_020685 57415 Hs.47166 NM_020685 ENSG00000114405 C3orf14 HT021 chromosome 3 open reading frame 14 protein-coding chr11-5521 chr11 87393119 87393329 + 13.9 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 326187 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr18-660 chr18 48033551 48033761 + 13.9 0.000 intron (NM_001371287, intron 5 of 5) intron (NM_001371287, intron 5 of 5) -102510 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr10-4237 chr10 126059361 126059571 + 13.9 0.000 intron (NM_001288974, intron 14 of 18) intron (NM_001288974, intron 14 of 18) -86193 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr9-2342 chr9 72661458 72661668 + 13.9 0.000 intron (NM_138691, intron 5 of 23) intron (NM_138691, intron 5 of 23) 139762 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr20-626 chr20 37297137 37297347 + 13.9 0.000 intron (NM_001003897, intron 1 of 2) MARNA|DNA|TcMar-Mariner 7587 NM_022077 63905 Hs.6126 NM_022077 ENSG00000101363 MANBAL - mannosidase beta like protein-coding chr11-2687 chr11 80416482 80416692 + 13.9 0.000 Intergenic Intergenic 346216 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr2-7609 chr2 26507264 26507474 + 13.9 0.000 intron (NM_194248, intron 5 of 46) intron (NM_194248, intron 5 of 46) -29245 NM_194322 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr19-1900 chr19 47095384 47095594 + 13.9 0.000 intron (NM_015168, intron 2 of 14) intron (NM_015168, intron 2 of 14) 18287 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chrX-1056 chrX 122636461 122636671 + 13.9 0.000 Intergenic L1MA3|LINE|L1 -547677 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr21-351 chr21 36847363 36847573 + 13.9 0.000 intron (NM_001352515, intron 6 of 10) intron (NM_001352515, intron 6 of 10) 114890 NM_001352518 3141 Hs.371350 NM_000411 ENSG00000159267 HLCS HCS holocarboxylase synthetase protein-coding chr13-2621 chr13 76976644 76976854 + 13.9 0.000 Intergenic Intergenic -15332 NM_001366624 1203 Hs.30213 NM_006493 ENSG00000102805 CLN5 - CLN5 intracellular trafficking protein protein-coding chr6-2129 chr6 3803805 3804015 + 13.9 0.000 Intergenic MARNA|DNA|TcMar-Mariner -45463 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr1-1551 chr1 1063850 1064060 + 13.9 0.000 intron (NR_148960, intron 3 of 3) intron (NR_148960, intron 3 of 3) 4221 NR_148960 100288175 Hs.713286 NR_148960 ENSG00000217801 LOC100288175 - uncharacterized LOC100288175 ncRNA chr2-5536 chr2 159091458 159091668 + 13.9 0.000 non-coding (NR_146421, exon 4 of 4) non-coding (NR_146421, exon 4 of 4) -95272 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr10-2716 chr10 104590000 104590210 + 13.9 0.000 Intergenic Intergenic -51185 NM_014978 22986 Hs.671950 NM_014978 ENSG00000156395 SORCS3 SORCS sortilin related VPS10 domain containing receptor 3 protein-coding chr9-1197 chr9 113620411 113620621 + 13.9 0.000 Intergenic MIR3|SINE|MIR 26387 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr4-1568 chr4 3129082 3129292 + 13.9 0.000 intron (NM_002111, intron 12 of 66) L1MB3|LINE|L1 54506 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr4-1654 chr4 110193841 110194051 + 13.9 0.000 intron (NM_001130721, intron 2 of 4) intron (NM_001130721, intron 2 of 4) 4669 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr4-1279 chr4 71266626 71266836 + 13.9 0.000 intron (NM_001098484, intron 3 of 25) intron (NM_001098484, intron 3 of 25) -72322 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr4-3507 chr4 146851812 146852022 + 13.9 0.000 intron (NR_133922, intron 8 of 13) intron (NR_133922, intron 8 of 13) 93947 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr15-805 chr15 70775271 70775481 + 13.9 0.000 Intergenic Intergenic -11818 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr5-2399 chr5 103805000 103805210 + 13.9 0.000 Intergenic MamRep137|DNA|TcMar-Tigger -242316 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr7-815 chr7 16644719 16644929 + 13.9 0.000 intron (NM_020319, intron 1 of 9) CpG 930 NM_020319 57037 Hs.157378 NM_020319 ENSG00000106524 ANKMY2 ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding chr9-1610 chr9 124122919 124123129 + 13.9 0.000 Intergenic Intergenic 111256 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr8-983 chr8 119739121 119739331 + 13.9 0.000 intron (NM_003184, intron 25 of 25) intron (NM_003184, intron 25 of 25) -65836 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chrX-1874 chrX 122914028 122914238 + 13.9 0.000 Intergenic L1M3e|LINE|L1 -270110 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr11-3231 chr11 69541663 69541873 + 13.9 0.000 Intergenic MER121|DNA|hAT? 56207 NR_120545 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr5-2542 chr5 172868507 172868717 + 13.9 0.000 intron (NM_001031711, intron 1 of 9) L1MC1|LINE|L1 34361 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr1-4594 chr1 117077265 117077475 + 13.9 0.000 intron (NM_003594, intron 7 of 22) L2b|LINE|L2 17044 NM_003594 8458 Hs.32333 NM_003594 ENSG00000116830 TTF2 HuF2|ZGRF6 transcription termination factor 2 protein-coding chr3-2666 chr3 38969481 38969691 + 13.9 0.000 intron (NM_001349253, intron 2 of 29) intron (NM_001349253, intron 2 of 29) -19025 NM_014139 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr11-4068 chr11 18772358 18772568 + 13.9 0.000 intron (NM_006906, intron 1 of 14) intron (NM_006906, intron 1 of 14) 19335 NM_001039970 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr1-10848 chr1 204560696 204560906 + 13.9 0.000 Intergenic L2a|LINE|L2 44395 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr7-2049 chr7 107879491 107879701 + 13.9 0.000 Intergenic Intergenic -11511 NM_001289752 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr15-990 chr15 64248067 64248277 + 13.9 0.000 intron (NM_001329607, intron 4 of 11) intron (NM_001329607, intron 4 of 11) -85017 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding chr7-1572 chr7 77425588 77425798 + 13.9 0.000 TTS (NR_110073) TTS (NR_110073) -9344 NM_001350897 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr8-884 chr8 29529858 29530068 + 13.9 0.000 Intergenic Intergenic -179279 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr9-949 chr9 136399452 136399662 + 13.9 0.000 Intergenic Intergenic -1120 NM_003086 6621 Hs.113265 NM_003086 ENSG00000165684 SNAPC4 PTFalpha|SNAP190 small nuclear RNA activating complex polypeptide 4 protein-coding chr17-1654 chr17 59093764 59093974 + 13.9 0.000 intron (NM_001320987, intron 1 of 22) intron (NM_001320987, intron 1 of 22) 13011 NM_001320987 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding chr2-8241 chr2 98045752 98045962 + 13.9 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -41310 NR_144297 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr2-7301 chr2 239311132 239311342 + 13.9 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) 5775 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr19-2153 chr19 7398798 7399008 + 13.9 0.000 intron (NM_015318, intron 1 of 20) intron (NM_015318, intron 1 of 20) 3758 NM_001367824 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr4-1222 chr4 151921468 151921678 + 13.9 0.000 Intergenic Intergenic -160550 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr2-2228 chr2 177392763 177392973 + 13.9 0.000 promoter-TSS (NM_003659) promoter-TSS (NM_003659) 95 NM_003659 8540 Hs.516543 NM_003659 ENSG00000018510 AGPS ADAP-S|ADAS|ADHAPS|ADPS|ALDHPSY|RCDP3 alkylglycerone phosphate synthase protein-coding chr9-4239 chr9 84169472 84169682 + 13.9 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 106134 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr18-754 chr18 2515395 2515605 + 13.9 0.000 Intergenic L2|LINE|L2 56005 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chrX-436 chrX 67605347 67605557 + 13.9 0.000 intron (NM_001011645, intron 2 of 8) intron (NM_001011645, intron 2 of 8) 60829 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr4-2583 chr4 105807569 105807779 + 13.9 0.000 intron (NM_001370181, intron 5 of 11) L1MC4|LINE|L1 19498 NR_125927 101929529 Hs.603751 NR_125927 ENSG00000251175 LOC101929529 - uncharacterized LOC101929529 ncRNA chr20-1146 chr20 47516845 47517055 + 13.9 0.000 intron (NM_181659, intron 1 of 22) AluSz|SINE|Alu 15063 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr1-3330 chr1 24705497 24705707 + 13.9 0.000 Intergenic Intergenic -39845 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr7-1728 chr7 12030168 12030378 + 13.9 0.000 Intergenic Intergenic -181021 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr6-1196 chr6 4974031 4974241 + 13.9 0.000 Intergenic Intergenic -29680 NR_126015 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr3-1917 chr3 177618854 177619064 + 13.9 0.000 intron (NR_047568, intron 2 of 3) intron (NR_047568, intron 2 of 3) 177038 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr5-1785 chr5 41787455 41787665 + 13.9 0.000 intron (NR_157114, intron 12 of 15) L1MEc|LINE|L1 56097 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr10-1593 chr10 31739752 31739962 + 13.9 0.000 Intergenic ERVL-E-int|LTR|ERVL 169069 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr6-1387 chr6 106528058 106528268 + 13.9 0.000 intron (NM_001371242, intron 7 of 21) intron (NM_001371242, intron 7 of 21) 16308 NM_001624 202 Hs.724262 NM_001624 ENSG00000112297 CRYBG1 AIM1|ST4 crystallin beta-gamma domain containing 1 protein-coding chr8-1550 chr8 116709897 116710107 + 13.9 0.000 intron (NM_003756, intron 2 of 7) intron (NM_003756, intron 2 of 7) 45821 NM_003756 8667 Hs.492599 NM_003756 ENSG00000147677 EIF3H EIF3S3|eIF3-gamma|eIF3-p40 eukaryotic translation initiation factor 3 subunit H protein-coding chr14-991 chr14 92536287 92536497 + 13.9 0.000 intron (NM_024832, intron 1 of 9) intron (NM_024832, intron 1 of 9) 22611 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr6-1577 chr6 14734685 14734895 + 13.9 0.000 Intergenic Intergenic -449336 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr2-7512 chr2 20304473 20304683 + 13.9 0.000 intron (NM_001282790, intron 6 of 18) MER58B|DNA|hAT-Charlie 22808 NM_001282790 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr4-2145 chr4 79625749 79625959 + 13.9 0.000 Intergenic Intergenic 133261 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr9-1092 chr9 95462742 95462952 + 13.9 0.000 promoter-TSS (NR_038982) promoter-TSS (NR_038982) -762 NR_038982 100507346 Hs.661847 NR_038982 LOC100507346 - uncharacterized LOC100507346 ncRNA chr2-1771 chr2 198371960 198372170 + 13.9 0.000 intron (NR_110267, intron 2 of 2) intron (NR_110267, intron 2 of 2) 3032 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr9-2644 chr9 33172330 33172540 + 13.9 0.000 intron (NR_108108, intron 1 of 3) LTR45C|LTR|ERV1 4576 NR_108108 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr4-1584 chr4 8422500 8422710 + 13.9 0.000 intron (NM_003501, intron 1 of 17) intron (NM_003501, intron 1 of 17) 18118 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr6-1910 chr6 24273625 24273835 + 13.9 0.000 intron (NM_016356, intron 7 of 9) intron (NM_016356, intron 7 of 9) -83173 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr10-1900 chr10 119306137 119306347 + 13.9 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) -71730 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr5-2114 chr5 65017811 65018021 + 13.9 0.000 intron (NM_005869, intron 13 of 13) intron (NM_005869, intron 13 of 13) 248986 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr1-7973 chr1 201793072 201793282 + 13.9 0.000 intron (NM_020443, intron 13 of 29) intron (NM_020443, intron 13 of 29) -15434 NR_031599 100302158 NR_031599 ENSG00000221028 MIR1231 MIRN1231|hsa-mir-1231 microRNA 1231 ncRNA chr12-1543 chr12 94099709 94099919 + 13.9 0.000 Intergenic Intergenic -48763 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr4-703 chr4 56530355 56530565 + 13.9 0.000 promoter-TSS (NM_001256475) promoter-TSS (NM_001256475) -146 NM_001256475 100506564 Hs.573073 NM_001256475 ENSG00000249693 THEGL - theg spermatid protein like protein-coding chr6-1536 chr6 53628096 53628306 + 13.9 0.000 promoter-TSS (NR_125841) promoter-TSS (NR_125841) -179 NR_125841 101927171 Hs.334005 NR_125841 ENSG00000235899 LINC01564 TCONS_00011314|XLOC_005327 long intergenic non-protein coding RNA 1564 ncRNA chr6-3298 chr6 158398448 158398658 + 13.9 0.000 intron (NM_020245, intron 1 of 13) intron (NM_020245, intron 1 of 13) 75571 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr10-2557 chr10 68348548 68348758 + 13.9 0.000 intron (NR_103476, intron 16 of 18) intron (NR_103476, intron 16 of 18) -15725 NM_001033083 64081 Hs.198158 NM_022129 ENSG00000108187 PBLD HEL-S-306|MAWBP|MAWDBP phenazine biosynthesis like protein domain containing protein-coding chr1-2934 chr1 47721382 47721592 + 13.9 0.000 Intergenic L2c|LINE|L2 275898 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr13-2634 chr13 78311646 78311856 + 13.9 0.000 intron (NR_047001, intron 3 of 5) intron (NR_047001, intron 3 of 5) 256896 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr1-3927 chr1 88985152 88985362 + 13.9 0.000 intron (NM_019610, intron 1 of 1) intron (NM_019610, intron 1 of 1) 7372 NM_001162536 494115 Hs.481898 NM_019610 ENSG00000213516 RBMXL1 RBM1 RBMX like 1 protein-coding chr2-1538 chr2 176269377 176269587 + 13.9 0.000 promoter-TSS (NM_001319098) promoter-TSS (NM_001319098) 40 NM_001006635 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr17-1136 chr17 75515675 75515885 + 13.9 0.000 promoter-TSS (NM_207346) promoter-TSS (NM_207346) -243 NM_020753 57513 Hs.274408 NM_020753 ENSG00000177303 CASKIN2 ANKS5B CASK interacting protein 2 protein-coding chr16-1283 chr16 73298625 73298835 + 13.9 0.000 Intergenic Intergenic -88075 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr6-770 chr6 28141679 28141889 + 13.9 0.000 promoter-TSS (NM_001278119) promoter-TSS (NM_001278119) -99 NM_001278122 7745 Hs.57679 NM_006298 ENSG00000198315 ZKSCAN8 LD5-1|ZNF192|ZSCAN40 zinc finger with KRAB and SCAN domains 8 protein-coding chr3-2392 chr3 183968929 183969139 + 13.9 0.000 intron (NM_001320032, intron 11 of 29) MamSINE1|SINE|tRNA-RTE -37304 NR_046570 100873982 Hs.570696 NR_046570 ENSG00000223882 ABCC5-AS1 - ABCC5 antisense RNA 1 ncRNA chr14-1539 chr14 61553986 61554196 + 13.9 0.000 Intergenic Intergenic 16103 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr2-4151 chr2 174951834 174952044 + 13.9 0.000 intron (NM_001025201, intron 3 of 12) intron (NM_001025201, intron 3 of 12) 53314 NM_001822 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr17-3772 chr17 34536756 34536966 + 13.9 0.000 Intergenic Intergenic 42508 NR_160787 400591 Hs.514090 NM_207454 C17orf102 - chromosome 17 open reading frame 102 ncRNA chr1-2223 chr1 154669812 154670022 + 13.9 0.000 Intergenic Intergenic -41920 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr6-1579 chr6 17575011 17575221 + 13.9 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -25186 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr1-11083 chr1 228232055 228232265 + 13.9 0.000 intron (NM_052843, intron 9 of 80) L1MB5|LINE|L1 -18496 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr2-2729 chr2 117980183 117980393 + 13.9 0.000 intron (NM_019044, intron 7 of 23) intron (NM_019044, intron 7 of 23) 33782 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr10-5146 chr10 52172541 52172751 + 13.9 0.000 intron (NM_001098512, intron 9 of 17) intron (NM_001098512, intron 9 of 17) 141482 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr20-2401 chr20 19113695 19113905 + 13.9 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -98842 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr20-1202 chr20 10792458 10792668 + 13.9 0.000 Intergenic Intergenic 39473 NR_110611 101929395 Hs.244862 NR_110611 LINC01752 - long intergenic non-protein coding RNA 1752 ncRNA chr19-1633 chr19 908592 908802 + 13.9 0.000 intron (NM_138774, intron 1 of 7) intron (NM_138774, intron 1 of 7) 4522 NM_138774 91300 Hs.557655 NM_138774 ENSG00000198858 R3HDM4 C19orf22 R3H domain containing 4 protein-coding chr9-2573 chr9 135095074 135095284 + 13.9 0.000 intron (NM_001282611, intron 2 of 5) intron (NM_001282611, intron 2 of 5) 7511 NM_001282611 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr9-1980 chr9 114611971 114612181 + 13.9 0.000 intron (NM_153045, intron 1 of 8) MIR3|SINE|MIR 785 NM_001330760 203197 Hs.522357 NM_153045 ENSG00000157693 TMEM268 C9orf91 transmembrane protein 268 protein-coding chr8-785 chr8 67952249 67952459 + 13.9 0.000 5' UTR (NM_025170, exon 1 of 24) 5' UTR (NM_025170, exon 1 of 24) 308 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr8-642 chr8 76782017 76782227 + 13.9 0.000 intron (NM_024721, intron 4 of 10) (T)n|Simple_repeat|Simple_repeat -98847 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA chr13-537 chr13 50909700 50909910 + 13.9 0.000 5' UTR (NM_024570, exon 1 of 11) 5' UTR (NM_024570, exon 1 of 11) 127 NM_024570 79621 Hs.306291 NM_024570 ENSG00000136104 RNASEH2B AGS2|DLEU8 ribonuclease H2 subunit B protein-coding chr2-1386 chr2 46116743 46116953 + 13.9 0.000 intron (NM_005400, intron 11 of 14) intron (NM_005400, intron 11 of 14) -180559 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr4-337 chr4 151015681 151015891 + 13.9 0.000 promoter-TSS (NM_001199282) promoter-TSS (NM_001199282) -59 NM_001367550 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr5-2592 chr5 96172679 96172889 + 13.9 0.000 intron (NR_130776, intron 1 of 4) MLT1N2|LTR|ERVL-MaLR 93646 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr9-573 chr9 37422655 37422865 + 13.9 0.000 promoter-TSS (NM_012203) promoter-TSS (NM_012203) 64 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr17-1316 chr17 80035341 80035551 + 13.9 0.000 intron (NM_019020, intron 1 of 11) CpG 426 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr2-1156 chr2 158457440 158457650 + 13.9 0.000 promoter-TSS (NM_001301684) promoter-TSS (NM_001301684) 593 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr18-1192 chr18 27312086 27312296 + 13.9 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 30465 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr15-666 chr15 68432120 68432330 + 13.9 0.000 promoter-TSS (NM_001004439) promoter-TSS (NM_001004439) -62 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr17-6170 chr17 82429539 82429749 + 13.9 0.000 intron (NM_173620, intron 4 of 11) intron (NM_173620, intron 4 of 11) -11058 NM_024648 79701 Hs.187505 NM_024648 ENSG00000181396 OGFOD3 C17orf101 2-oxoglutarate and iron dependent oxygenase domain containing 3 protein-coding chr12-1598 chr12 27627421 27627631 + 13.9 0.000 intron (NM_001198915, intron 2 of 26) intron (NM_001198915, intron 2 of 26) -68921 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr13-731 chr13 99067282 99067492 + 13.9 0.000 intron (NM_015296, intron 1 of 55) intron (NM_015296, intron 1 of 55) 19307 NM_001318849 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr11-2991 chr11 112265917 112266127 + 13.9 0.000 Intergenic Intergenic -4727 NR_126004 283140 Hs.651827 NR_126004 ENSG00000250303 LINC02762 - long intergenic non-protein coding RNA 2762 ncRNA chr9-2146 chr9 120366479 120366689 + 13.9 0.000 Intergenic Intergenic -121534 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr8-1776 chr8 69489219 69489429 + 13.9 0.000 intron (NM_001128204, intron 1 of 21) intron (NM_001128204, intron 1 of 21) -3523 NR_156415 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr5-2405 chr5 108259482 108259692 + 13.9 0.000 intron (NM_001163315, intron 4 of 8) intron (NM_001163315, intron 4 of 8) 122511 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr1-4545 chr1 60762942 60763152 + 13.9 0.000 intron (NR_110628, intron 1 of 5) intron (NR_110628, intron 1 of 5) 62537 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr1-2175 chr1 33433818 33434028 + 13.9 0.000 Intergenic Intergenic -38722 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr10-1658 chr10 110521851 110522061 + 13.9 0.000 Intergenic Intergenic 24049 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr3-2148 chr3 125511499 125511709 + 13.9 0.000 intron (NM_003794, intron 1 of 13) intron (NM_003794, intron 1 of 13) 8598 NR_073435 8723 Hs.507243 NM_003794 ENSG00000114520 SNX4 ATG24B sorting nexin 4 protein-coding chr6-2584 chr6 74891804 74892014 + 13.9 0.000 Intergenic Intergenic 236873 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr7-2495 chr7 19392389 19392599 + 13.9 0.000 Intergenic Intergenic -247073 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chr4-2924 chr4 89800108 89800318 + 13.9 0.000 intron (NM_001146054, intron 4 of 5) intron (NM_001146054, intron 4 of 5) -36188 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr6-1666 chr6 169689231 169689441 + 13.9 0.000 intron (NR_146876, intron 1 of 15) intron (NR_146876, intron 1 of 15) 12693 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr1-4609 chr1 154556981 154557191 + 13.9 0.000 intron (NM_017582, intron 1 of 12) intron (NM_017582, intron 1 of 12) 1576 NM_017582 55585 Hs.607928 NM_017582 ENSG00000160714 UBE2Q1 GTAP|NICE-5|NICE5|PRO3094|UBE2Q ubiquitin conjugating enzyme E2 Q1 protein-coding chr3-995 chr3 40878091 40878301 + 13.9 0.000 Intergenic Intergenic -321309 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr5-1550 chr5 57494585 57494795 + 13.9 0.000 Intergenic HAL1|LINE|L1 -11879 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr19-1384 chr19 7927549 7927759 + 13.9 0.000 intron (NM_006351, intron 12 of 12) intron (NM_006351, intron 12 of 12) -1519 NM_206833 404217 Hs.657978 NM_206833 ENSG00000178531 CTXN1 CTXN cortexin 1 protein-coding chr13-2008 chr13 35952416 35952626 + 13.9 0.000 intron (NM_001330071, intron 3 of 16) intron (NM_001330071, intron 3 of 16) -96660 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr1-4032 chr1 199272164 199272374 + 13.9 0.000 intron (NR_147896, intron 3 of 3) intron (NR_147896, intron 3 of 3) 123671 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr9-1729 chr9 123522977 123523187 + 13.9 0.000 intron (NM_001352968, intron 12 of 18) intron (NM_001352968, intron 12 of 18) -37460 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr4-4894 chr4 120578661 120578871 + 13.9 0.000 Intergenic Intergenic 344100 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr15-1386 chr15 33720970 33721180 + 13.9 0.000 intron (NM_001243996, intron 43 of 102) MLT1F1|LTR|ERVL-MaLR -247422 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr1-5235 chr1 201365266 201365476 + 13.9 0.000 intron (NM_000364, intron 9 of 15) intron (NM_000364, intron 9 of 15) 12309 NM_001276347 7139 Hs.533613 NM_000364 ENSG00000118194 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T2, cardiac type protein-coding chr18-513 chr18 41938538 41938748 + 13.9 0.000 Intergenic Intergenic -16591 NM_001308020 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr16-1772 chr16 533970 534180 + 13.9 0.000 intron (NM_005632, intron 2 of 13) intron (NM_005632, intron 2 of 13) -1241 NR_049852 100847028 NR_049852 ENSG00000266124 MIR5587 - microRNA 5587 ncRNA chr12-4381 chr12 5250876 5251086 + 13.9 0.000 Intergenic Intergenic -7830 NR_120477 101929584 Hs.436529 NR_120476 ENSG00000256115 LINC02443 - long intergenic non-protein coding RNA 2443 ncRNA chr9-1120 chr9 95056093 95056303 + 13.9 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -9152 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr2-3503 chr2 219125251 219125461 + 13.9 0.000 intron (NM_024782, intron 5 of 7) intron (NM_024782, intron 5 of 7) 35509 NM_024782 79840 Hs.225988 NM_024782 ENSG00000187736 NHEJ1 XLF non-homologous end joining factor 1 protein-coding chr12-1175 chr12 49731945 49732155 + 13.9 0.000 Intergenic L2a|LINE|L2 -9507 NM_003217 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr12-3960 chr12 9357008 9357218 + 13.9 0.000 Intergenic L1PA6|LINE|L1 -10351 NR_120479 101930452 Hs.734183 NR_120479 ENSG00000260423 LINC02367 - long intergenic non-protein coding RNA 2367 ncRNA chr8-366 chr8 96645227 96645437 + 13.9 0.000 promoter-TSS (NM_016134) promoter-TSS (NM_016134) 90 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr11-1575 chr11 118634242 118634452 + 13.9 0.000 intron (NM_015157, intron 10 of 23) intron (NM_015157, intron 10 of 23) -9653 NR_106773 102466719 NR_106773 ENSG00000284246 MIR6716 hsa-mir-6716 microRNA 6716 ncRNA chr3-836 chr3 9933779 9933989 + 13.9 0.000 promoter-TSS (NM_015513) promoter-TSS (NM_015513) 50 NM_001031717 78987 Hs.9383 NM_015513 ENSG00000163703 CRELD1 AVSD2|CIRRIN cysteine rich with EGF like domains 1 protein-coding chr22-1447 chr22 46308248 46308458 + 13.9 0.000 exon (NM_016426, exon 4 of 12) exon (NM_016426, exon 4 of 12) 11483 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding chr11-879 chr11 69674531 69674741 + 13.9 0.000 intron (NM_153451, intron 1 of 4) intron (NM_153451, intron 1 of 4) 717 NM_153451 220064 Hs.667996 NM_153451 ENSG00000149716 LTO1 CIAB1|ORAOV1|TAOS1 LTO1 maturation factor of ABCE1 protein-coding chr2-1540 chr2 179333088 179333298 + 13.9 0.000 Intergenic MER117|DNA|hAT-Charlie -68361 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr13-2122 chr13 91417890 91418100 + 13.9 0.000 intron (NM_004466, intron 1 of 7) Tigger7|DNA|TcMar-Tigger 19374 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr1-3699 chr1 196466745 196466955 + 13.9 0.000 intron (NM_001287820, intron 7 of 26) intron (NM_001287820, intron 7 of 26) 115631 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chr2-1969 chr2 17303441 17303651 + 13.9 0.000 Intergenic Intergenic 214894 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr15-2147 chr15 75151620 75151830 + 13.9 0.000 Intergenic Intergenic -50157 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr11-1640 chr11 93089550 93089760 + 13.9 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 107771 NM_001286139 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr6-1843 chr6 3509473 3509683 + 13.9 0.000 Intergenic L1MC4|LINE|L1 -53019 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr5-1815 chr5 77145754 77145964 + 13.9 0.000 intron (NR_024398, intron 3 of 3) MLT1E2-int|LTR|ERVL-MaLR -34445 NM_001349752 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr10-1724 chr10 91846258 91846468 + 13.9 0.000 intron (NM_025235, intron 18 of 26) intron (NM_025235, intron 18 of 26) 47937 NM_025235 80351 Hs.329327 NM_025235 ENSG00000107854 TNKS2 ARTD6|PARP-5b|PARP-5c|PARP5B|PARP5C|TANK2|TNKL|pART6 tankyrase 2 protein-coding chr3-1706 chr3 48662936 48663146 + 13.9 0.000 promoter-TSS (NM_001407) promoter-TSS (NM_001407) -155 NM_001407 1951 Hs.631926 NM_001407 ENSG00000008300 CELSR3 ADGRC3|CDHF11|EGFL1|FMI1|HFMI1|MEGF2|RESDA1 cadherin EGF LAG seven-pass G-type receptor 3 protein-coding chr2-2807 chr2 42736926 42737136 + 13.9 0.000 intron (NM_001330443, intron 16 of 16) L1MA3|LINE|L1 27230 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr9-1426 chr9 131395497 131395707 + 13.9 0.000 Intergenic Intergenic -34488 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr1-3598 chr1 23924167 23924377 + 13.9 0.000 Intergenic Intergenic -4798 NR_039615 100616492 NR_039615 ENSG00000264926 MIR378F mir-378f microRNA 378f ncRNA chr1-11141 chr1 235096750 235096960 + 13.9 0.000 Intergenic AluSq2|SINE|Alu -27037 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA chr10-1649 chr10 102074245 102074455 + 13.9 0.000 Intergenic Intergenic 8983 NM_024747 79803 Hs.125133 NM_024747 ENSG00000166189 HPS6 BLOC2S3 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 protein-coding chr11-3871 chr11 79182853 79183063 + 13.9 0.000 intron (NM_001098816, intron 3 of 33) L1MC1|LINE|L1 219151 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr5-2866 chr5 79956045 79956255 + 13.9 0.000 intron (NR_131226, intron 2 of 2) intron (NR_131226, intron 2 of 2) 19571 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr17-1819 chr17 2151664 2151874 + 13.9 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -63008 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr11-3073 chr11 13718088 13718298 + 13.9 0.000 intron (NM_032228, intron 9 of 11) MLT1G-int|LTR|ERVL-MaLR 49525 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding chr17-2626 chr17 2432979 2433189 + 13.9 0.000 intron (NM_024086, intron 8 of 9) intron (NM_024086, intron 8 of 9) -17648 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr16-1450 chr16 73775973 73776183 + 13.9 0.000 Intergenic Intergenic 389273 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr6-2372 chr6 136401858 136402068 + 13.9 0.000 intron (NM_001198611, intron 3 of 16) intron (NM_001198611, intron 3 of 16) 64912 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr1-1587 chr1 33143567 33143777 + 13.9 0.000 Intergenic Intergenic 32878 NM_001330483 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr8-2034 chr8 106300529 106300739 + 13.9 0.000 intron (NM_018002, intron 1 of 15) intron (NM_018002, intron 1 of 15) 30456 NM_018002 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr9-1864 chr9 72433909 72434119 + 13.9 0.000 Intergenic Intergenic -68806 NM_001102420 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr15-1132 chr15 43105537 43105747 + 13.9 0.000 intron (NM_174916, intron 1 of 46) intron (NM_174916, intron 1 of 46) 396 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr6-5066 chr6 114315797 114316007 + 13.9 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -253025 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr2-3302 chr2 100757790 100758000 + 13.9 0.000 Intergenic L3|LINE|CR1 -62244 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr1-4248 chr1 221897377 221897587 + 13.9 0.000 Intergenic Intergenic -56816 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr5-1850 chr5 127371557 127371767 + 13.9 0.000 intron (NM_001308121, intron 5 of 13) intron (NM_001308121, intron 5 of 13) 80866 NM_001256545 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr2-9134 chr2 209619555 209619765 + 13.9 0.000 intron (NM_001039538, intron 3 of 14) (ATAT)n|Simple_repeat|Simple_repeat 39981 NM_001363911 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr17-1129 chr17 54900757 54900967 + 13.9 0.000 promoter-TSS (NM_005486) promoter-TSS (NM_005486) 10 NM_005486 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr6-2046 chr6 80102571 80102781 + 13.9 0.000 Intergenic L1MC1|LINE|L1 -3934 NM_000056 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr3-1422 chr3 186210196 186210406 + 13.9 0.000 intron (NM_001346, intron 21 of 24) intron (NM_001346, intron 21 of 24) -101212 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr8-1547 chr8 105763590 105763800 + 13.9 0.000 intron (NM_001362837, intron 5 of 7) MIRb|SINE|MIR 296808 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr7-1651 chr7 55509363 55509573 + 13.9 0.000 intron (NM_001321242, intron 2 of 4) MLT1A0|LTR|ERVL-MaLR 17412 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr3-823 chr3 126198203 126198413 + 13.9 0.000 intron (NR_046383, intron 1 of 1) intron (NR_046383, intron 1 of 1) -17122 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr8-1298 chr8 73579145 73579355 + 13.9 0.000 intron (NM_001164384, intron 10 of 10) intron (NM_001164384, intron 10 of 10) 159176 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA chr2-2912 chr2 232794931 232795141 + 13.9 0.000 intron (NM_015575, intron 15 of 30) intron (NM_015575, intron 15 of 30) -18471 NM_001172416 3769 Hs.467338 NM_002242 ENSG00000115474 KCNJ13 KIR1.4|KIR7.1|LCA16|SVD potassium voltage-gated channel subfamily J member 13 protein-coding chr1-3666 chr1 115907295 115907505 + 13.9 0.000 Intergenic L3|LINE|CR1 -11976 NR_125969 101928995 Hs.559119 NR_125969 ENSG00000228127 LINC01649 - long intergenic non-protein coding RNA 1649 ncRNA chr1-7192 chr1 212601154 212601364 + 13.9 0.000 intron (NM_001030287, intron 1 of 3) intron (NM_001030287, intron 1 of 3) -7502 NM_001206484 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chr15-1087 chr15 48925882 48926092 + 13.9 0.000 intron (NM_203349, intron 1 of 11) L2a|LINE|L2 37932 NM_203349 399694 Hs.642615 NM_203349 ENSG00000185634 SHC4 RaLP|SHCD SHC adaptor protein 4 protein-coding chr2-1238 chr2 98608288 98608498 + 13.9 0.000 promoter-TSS (NM_001330353) promoter-TSS (NM_001330353) 119 NM_001008215 493753 Hs.596537 NM_001008215 ENSG00000183513 COA5 6330578E17Rik|C2orf64|CEMCOX3|Pet191 cytochrome c oxidase assembly factor 5 protein-coding chr1-3578 chr1 3330031 3330241 + 13.9 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -124529 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr22-2434 chr22 19716234 19716444 + 13.9 0.000 promoter-TSS (NR_037611) promoter-TSS (NR_037611) -881 NR_037611 100526833 Hs.283743 NR_037611 ENSG00000284874 SEPT5-GP1BB GP1BB|GPIb-beta|GPIbB SEPT5-GP1BB readthrough ncRNA chr11-4158 chr11 47463478 47463688 + 13.9 0.000 Intergenic Intergenic -14447 NM_005055 5913 Hs.81218 NM_005055 ENSG00000165917 RAPSN CMS11|CMS4C|FADS|FADS2|RAPSYN|RNF205 receptor associated protein of the synapse protein-coding chrX-301 chrX 150898471 150898681 + 13.9 0.000 promoter-TSS (NM_031462) promoter-TSS (NM_031462) 92 NM_134445 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr9-2070 chr9 38065540 38065750 + 13.9 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 3582 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr1-5912 chr1 12509917 12510127 + 13.9 0.000 3' UTR (NM_018156, exon 69 of 69) 3' UTR (NM_018156, exon 69 of 69) 2776 NR_003022 677882 Hs.658450 NR_003022 ENSG00000266079 SNORA59B ACA59 small nucleolar RNA, H/ACA box 59B snoRNA chr14-642 chr14 91114069 91114279 + 13.9 0.000 promoter-TSS (NM_001102367) promoter-TSS (NM_001102367) 101 NM_001286473 80017 Hs.309849 NM_024952 ENSG00000133943 DGLUCY C14orf159 D-glutamate cyclase protein-coding chr11-3213 chr11 67190411 67190621 + 13.9 0.000 intron (NR_027473, intron 5 of 20) AluSx|SINE|Alu -49498 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr2-1784 chr2 230327154 230327364 + 13.9 0.000 promoter-TSS (NM_138402) promoter-TSS (NM_138402) 88 NM_001308163 93349 Hs.589661 NM_138402 ENSG00000185404 SP140L - SP140 nuclear body protein like protein-coding chr17-1619 chr17 79202006 79202216 + 13.9 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 127174 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr5-1676 chr5 61825779 61825989 + 13.9 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -90186 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr9-1970 chr9 97741218 97741428 + 13.9 0.000 intron (NR_147055, intron 5 of 10) CpG -43914 NM_000380 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr19-2754 chr19 41196223 41196433 + 13.9 0.000 intron (NM_030622, intron 2 of 8) intron (NM_030622, intron 2 of 8) 3109 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr16-2165 chr16 66832784 66832994 + 13.9 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -1913 NM_003905 8883 Hs.460978 NM_003905 ENSG00000159593 NAE1 A-116A10.1|APPBP1|HPP1|ula-1 NEDD8 activating enzyme E1 subunit 1 protein-coding chr7-1578 chr7 94620845 94621055 + 13.9 0.000 intron (NM_001346717, intron 4 of 9) intron (NM_001346717, intron 4 of 9) 35183 NM_003919 8910 Hs.371199 NM_003919 ENSG00000127990 SGCE DYT11|ESG|epsilon-SG sarcoglycan epsilon protein-coding chr6-1327 chr6 18477467 18477677 + 13.9 0.000 Intergenic Intergenic -45175 NR_149116 105374956 Hs.561599 NR_149116 MIR548A1HG - MIR548A1 host gene ncRNA chr2-1563 chr2 10123916 10124126 + 13.9 0.000 intron (NM_001034, intron 4 of 9) intron (NM_001034, intron 4 of 9) 1282 NM_001034 6241 Hs.226390 NM_001034 ENSG00000171848 RRM2 R2|RR2|RR2M ribonucleotide reductase regulatory subunit M2 protein-coding chr6-3239 chr6 144415156 144415366 + 13.9 0.000 intron (NM_007124, intron 2 of 73) Tigger3b|DNA|TcMar-Tigger 9606 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr6-1265 chr6 45537564 45537774 + 13.9 0.000 intron (NM_001015051, intron 7 of 7) intron (NM_001015051, intron 7 of 7) 115394 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr8-3884 chr8 38233063 38233273 + 13.9 0.000 exon (NM_001362912, exon 2 of 18) exon (NM_001362912, exon 2 of 18) 1215 NM_001164232 23259 Hs.434966 NM_015214 ENSG00000085788 DDHD2 SAMWD1|SPG54|iPLA(1)gamma DDHD domain containing 2 protein-coding chr1-7016 chr1 170445252 170445462 + 13.9 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -86765 NM_001146039 92344 Hs.183702 NM_152281 ENSG00000120370 GORAB GO|NTKLBP1|SCYL1BP1 golgin, RAB6 interacting protein-coding chr2-4293 chr2 234004223 234004433 + 13.9 0.000 intron (NM_024080, intron 22 of 25) intron (NM_024080, intron 22 of 25) -46374 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr10-5196 chr10 60472572 60472782 + 13.9 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -82802 NM_020987 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr7-863 chr7 75896753 75896963 + 13.9 0.000 Intergenic Intergenic 17824 NM_001040456 57414 Hs.488827 NM_020684 ENSG00000005486 RHBDD2 NPD007|RHBDL7 rhomboid domain containing 2 protein-coding chr17-3017 chr17 76372396 76372606 + 13.9 0.000 Intergenic L1MB5|LINE|L1 -10703 NM_001355139 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr1-1408 chr1 248858096 248858306 + 13.9 0.000 exon (NM_001350072, exon 2 of 12) exon (NM_001350072, exon 2 of 12) 884 NM_001136036 55657 Hs.377705 NM_017865 ENSG00000171163 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding chr20-561 chr20 60249572 60249782 + 13.9 0.000 intron (NR_046099, intron 3 of 4) MER5A|DNA|hAT-Charlie -58797 NR_030376 693231 NR_030376 ENSG00000207802 MIR646 MIRN646|hsa-mir-646 microRNA 646 ncRNA chr1-7045 chr1 178137107 178137317 + 13.9 0.000 intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) 43108 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr12-1012 chr12 8078461 8078671 + 13.9 0.000 Intergenic Intergenic -3645 NR_024260 25977 Hs.555927 NM_015509 ENSG00000089818 NECAP1 EIEE21 NECAP endocytosis associated 1 protein-coding chr10-2492 chr10 32948086 32948296 + 13.9 0.000 intron (NM_002211, intron 1 of 15) intron (NM_002211, intron 1 of 15) 9703 NM_133376 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr20-1742 chr20 46482111 46482321 + 13.9 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -16924 NR_026640 7686 Hs.717103 NR_026640 ENSG00000225849 MKRN7P MKRNP3|ZNF127L5|dJ981L23.2 makorin ring finger protein 7, pseudogene pseudo chr13-1523 chr13 24736163 24736373 + 13.9 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -27901 NM_031277 56163 Hs.97464 NM_031277 ENSG00000132972 RNF17 Mmip-2|SPATA23|TDRD4 ring finger protein 17 protein-coding chr6-3599 chr6 90772413 90772623 + 13.9 0.000 Intergenic Intergenic -185446 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr13-2780 chr13 99898070 99898280 + 13.9 0.000 intron (NR_104592, intron 8 of 9) intron (NR_104592, intron 8 of 9) 58990 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr3-2563 chr3 84177819 84178029 + 13.9 0.000 Intergenic L1MA6|LINE|L1 691651 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr1-4112 chr1 241842480 241842690 + 13.9 0.000 Intergenic Intergenic -5606 NM_001319224 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr2-1612 chr2 188292632 188292842 + 13.9 0.000 promoter-TSS (NR_045562) promoter-TSS (NR_045562) -91 NR_045563 51454 Hs.470887 NM_016315 ENSG00000144366 GULP1 CED-6|CED6|GULP GULP PTB domain containing engulfment adaptor 1 protein-coding chr8-1991 chr8 85843378 85843588 + 13.9 0.000 Intergenic Intergenic -15541 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REXO1 like 2, pseudogene pseudo chr5-1126 chr5 68086902 68087112 + 13.9 0.000 Intergenic Intergenic -102869 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr4-2242 chr4 155242081 155242291 + 13.9 0.000 Intergenic L1MCa|LINE|L1 33550 NM_001370180 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr1-4680 chr1 221874326 221874536 + 13.9 0.000 Intergenic Intergenic -33765 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr15-1223 chr15 64284224 64284434 + 13.9 0.000 intron (NM_001329607, intron 2 of 11) L1MB7|LINE|L1 71844 NM_001329607 53944 Hs.646508 NM_022048 ENSG00000169118 CSNK1G1 CK1gamma1 casein kinase 1 gamma 1 protein-coding chr1-2288 chr1 16112018 16112228 + 13.9 0.000 Intergenic Intergenic -38472 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr13-1259 chr13 107462748 107462958 + 13.9 0.000 intron (NM_001080396, intron 1 of 2) MER77|LTR|ERVL 68395 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA chr6-5069 chr6 115108476 115108686 + 13.9 0.000 Intergenic L1MB8|LINE|L1 535254 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr22-704 chr22 41768535 41768745 + 13.9 0.000 intron (NM_152513, intron 19 of 30) MSTA|LTR|ERVL-MaLR -31982 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr2-1867 chr2 25673317 25673527 + 13.9 0.000 non-coding (NR_147180, exon 1 of 21) non-coding (NR_147180, exon 1 of 21) 155 NM_001351389 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr15-725 chr15 62390517 62390727 + 13.9 0.000 Intergenic Intergenic 47593 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr3-5536 chr3 1730055 1730265 + 13.9 0.000 Intergenic Intergenic -368643 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr11-2370 chr11 130849260 130849470 + 13.9 0.000 intron (NR_125383, intron 3 of 5) intron (NR_125383, intron 3 of 5) 12745 NR_125383 100507431 Hs.375101 NR_125383 LINC02551 - long intergenic non-protein coding RNA 2551 ncRNA chr4-1540 chr4 158810072 158810282 + 13.9 0.000 intron (NM_001366843, intron 1 of 17) intron (NM_001366843, intron 1 of 17) 4338 NM_001323916 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr10-3022 chr10 103637299 103637509 + 13.9 0.000 intron (NM_001365079, intron 2 of 8) intron (NM_001365079, intron 2 of 8) 40811 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr17-2465 chr17 47685975 47686185 + 13.9 0.000 TTS (NM_001276453) TTS (NM_001276453) -9184 NM_014726 9755 Hs.94790 NM_014726 ENSG00000198933 TBKBP1 ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding chr7-3107 chr7 29039797 29040007 + 13.9 0.000 intron (NM_001371256, intron 15 of 16) intron (NM_001371256, intron 15 of 16) 59935 NR_038965 100506497 Hs.586328 NR_038965 ENSG00000272568 LOC100506497 - uncharacterized LOC100506497 ncRNA chrX-1066 chrX 131172057 131172267 + 13.9 0.000 Intergenic L2c|LINE|L2 89727 NM_001330651 158763 Hs.22905 NM_144967 ENSG00000147256 ARHGAP36 - Rho GTPase activating protein 36 protein-coding chr11-2528 chr11 75248598 75248808 + 13.9 0.000 Intergenic Intergenic 7929 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr13-1038 chr13 75769157 75769367 + 13.9 0.000 intron (NM_005358, intron 5 of 29) intron (NM_005358, intron 5 of 29) 8601 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr18-457 chr18 10274423 10274633 + 13.9 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 139842 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr2-1326 chr2 69046391 69046601 + 13.9 0.000 intron (NM_032208, intron 3 of 17) intron (NM_032208, intron 3 of 17) 33352 NM_053034 84168 Hs.165859 NM_018153 ENSG00000169604 ANTXR1 ATR|GAPO|TEM8 ANTXR cell adhesion molecule 1 protein-coding chr18-687 chr18 77067673 77067883 + 13.9 0.000 intron (NM_001025100, intron 2 of 3) AmnSINE1|SINE|5S-Deu-L2 -50723 NM_001025090 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chrX-2212 chrX 41669915 41670125 + 13.9 0.000 intron (NM_003688, intron 6 of 26) L3b|LINE|CR1 -18953 NM_005300 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr20-1439 chr20 45561236 45561446 + 13.9 0.000 intron (NM_130896, intron 2 of 5) L2|LINE|L2 -13940 NM_001198986 100526773 Hs.274876 NM_001198986 ENSG00000249139 EPPIN-WFDC6 SPINLW1-WFDC6 EPPIN-WFDC6 readthrough protein-coding chr12-2503 chr12 81468202 81468412 + 13.9 0.000 intron (NM_001220474, intron 2 of 30) intron (NM_001220474, intron 2 of 30) 44084 NM_001282536 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr1-3922 chr1 86025302 86025512 + 13.9 0.000 intron (NM_152890, intron 14 of 59) intron (NM_152890, intron 14 of 59) 131064 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr1-6961 chr1 160172064 160172274 + 13.9 0.000 intron (NM_144699, intron 12 of 21) MER5A1|DNA|hAT-Charlie -5242 NM_001001734 480 Hs.662219 NM_144699 ENSG00000132681 ATP1A4 ATP1A1|ATP1AL2 ATPase Na+/K+ transporting subunit alpha 4 protein-coding chr1-1332 chr1 213051236 213051446 + 13.9 0.000 promoter-TSS (NM_012424) promoter-TSS (NM_012424) 100 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr6-1068 chr6 25302713 25302923 + 13.9 0.000 intron (NM_001173977, intron 2 of 36) intron (NM_001173977, intron 2 of 36) 23444 NM_001173977 55604 Hs.649550 NM_017640 ENSG00000079691 CARMIL1 CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5 capping protein regulator and myosin 1 linker 1 protein-coding chr5-2223 chr5 326202 326412 + 13.9 0.000 intron (NM_020731, intron 1 of 11) L1MB5|LINE|L1 22131 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr18-438 chr18 80108932 80109142 + 13.9 0.000 promoter-TSS (NM_014913) promoter-TSS (NM_014913) -225 NM_014913 22850 Hs.131915 NM_014913 ENSG00000101544 ADNP2 ZNF508 ADNP homeobox 2 protein-coding chr6-1835 chr6 157869143 157869353 + 13.9 0.000 intron (NM_016224, intron 2 of 17) intron (NM_016224, intron 2 of 17) 46002 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr12-1908 chr12 78470756 78470966 + 13.9 0.000 Intergenic Intergenic -111115 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr1-10893 chr1 206912513 206912723 + 13.9 0.000 intron (NM_005449, intron 3 of 7) intron (NM_005449, intron 3 of 7) 9323 NM_001142473 9214 Hs.58831 NM_005449 ENSG00000162894 FCMR FAIM3|TOSO Fc fragment of IgM receptor protein-coding chr11-5180 chr11 8375064 8375274 + 13.9 0.000 Intergenic Charlie20a|DNA|hAT-Charlie -106382 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr2-7198 chr2 216020157 216020367 + 13.9 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -6711 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr3-4743 chr3 78163491 78163701 + 13.9 0.000 Intergenic HAL1|LINE|L1 -114633 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr15-752 chr15 62618577 62618787 + 13.9 0.000 Intergenic Intergenic 26499 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr12-4235 chr12 110366694 110366904 + 13.9 0.000 Intergenic Intergenic 36931 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chrX-2911 chrX 151195240 151195450 + 13.9 0.000 Intergenic L1MA4|LINE|L1 -17509 NR_135300 100128688 Hs.460993 NR_135300 ENSG00000234696 GPR50-AS1 - GPR50 antisense RNA 1 ncRNA chr20-761 chr20 36103067 36103277 + 13.9 0.000 intron (NM_001258329, intron 1 of 22) L2c|LINE|L2 10462 NM_001258329 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr1-1711 chr1 16145744 16145954 + 13.9 0.000 intron (NM_004431, intron 3 of 16) MIRb|SINE|MIR 10220 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr1-5359 chr1 235883458 235883668 + 13.9 0.000 non-coding (NR_102436, exon 1 of 4) non-coding (NR_102436, exon 1 of 4) 145 NM_001301365 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr2-5270 chr2 61846803 61847013 + 13.9 0.000 intron (NR_037710, intron 1 of 5) AluSz|SINE|Alu 7152 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr11-3349 chr11 119908618 119908828 + 13.9 0.000 Intergenic Intergenic 179140 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr1-3663 chr1 111904531 111904741 + 13.9 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) -5021 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr12-1365 chr12 50283644 50283854 + 13.9 0.000 promoter-TSS (NM_001113546) promoter-TSS (NM_001113546) -229 NM_001113546 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr10-2688 chr10 100878451 100878661 + 13.9 0.000 Intergenic Intergenic -34407 NM_001136123 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr3-1231 chr3 113211254 113211464 + 13.9 0.000 promoter-TSS (NM_001301867) promoter-TSS (NM_001301867) -198 NM_033254 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr7-977 chr7 44466226 44466436 + 13.9 0.000 intron (NM_015332, intron 2 of 5) intron (NM_015332, intron 2 of 5) 24327 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr9-5158 chr9 38689727 38689937 + 13.9 0.000 Intergenic Intergenic 68744 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr8-1721 chr8 133561789 133561999 + 13.9 0.000 intron (NM_003033, intron 1 of 8) intron (NM_003033, intron 1 of 8) 9993 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr2-2959 chr2 26846363 26846573 + 13.9 0.000 Intergenic Intergenic -1664 NM_020134 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr9-1028 chr9 128684277 128684487 + 13.9 0.000 promoter-TSS (NM_001248000) promoter-TSS (NM_001248000) 589 NM_001122821 6418 Hs.436687 NM_003011 ENSG00000119335 SET 2PP2A|I2PP2A|IGAAD|IPP2A2|MRD58|PHAPII|TAF-I|TAF-IBETA SET nuclear proto-oncogene protein-coding chr7-6329 chr7 144671810 144672020 + 13.9 0.000 intron (NM_001350884, intron 2 of 7) intron (NM_001350884, intron 2 of 7) 66983 NR_146936 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr1-3911 chr1 76381820 76382030 + 13.9 0.000 intron (NM_001349111, intron 3 of 5) L1ME3|LINE|L1 307179 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr21-984 chr21 9945043 9945253 + 13.9 0.000 Intergenic LTR25-int|LTR|ERV1 -124087 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr10-1001 chr10 91908859 91909069 + 13.9 0.000 exon (NM_152429, exon 2 of 2) exon (NM_152429, exon 2 of 2) 522 NM_152429 143282 Hs.466120 NM_152429 ENSG00000174721 FGFBP3 C10orf13|FGF-BP3 fibroblast growth factor binding protein 3 protein-coding chr2-3927 chr2 56532331 56532541 + 13.9 0.000 Intergenic ERVL-B4-int|LTR|ERVL -346666 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr1-2129 chr1 225767093 225767303 + 13.9 0.000 Intergenic Intergenic -10615 NM_003133 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding chr8-1374 chr8 143472034 143472244 + 13.9 0.000 intron (NM_015117, intron 5 of 11) intron (NM_015117, intron 5 of 11) 34109 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr3-1373 chr3 49015950 49016160 + 13.9 0.000 TTS (NM_018031) TTS (NM_018031) 2525 NM_001009996 55152 Hs.654815 NM_018114 ENSG00000178149 DALRD3 - DALR anticodon binding domain containing 3 protein-coding chr19-1536 chr19 18932408 18932618 + 13.9 0.000 intron (NM_004838, intron 6 of 9) CpG 6536 NM_001145724 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr11-2072 chr11 79160901 79161111 + 13.9 0.000 intron (NM_001098816, intron 3 of 33) MLT1J|LTR|ERVL-MaLR 241103 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr3-2066 chr3 174947354 174947564 + 13.9 0.000 intron (NM_207015, intron 1 of 13) intron (NM_207015, intron 1 of 13) 88125 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr3-6788 chr3 143700227 143700437 + 13.9 0.000 intron (NM_173653, intron 4 of 15) L1MA3|LINE|L1 148136 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr2-4529 chr2 37590107 37590317 + 13.9 0.000 Intergenic Intergenic 81987 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr9-2020 chr9 135848006 135848216 + 13.9 0.000 intron (NM_015447, intron 7 of 16) intron (NM_015447, intron 7 of 16) 59435 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr19-4282 chr19 669459 669669 + 13.9 0.000 Intergenic MER11A|LTR|ERVK -6350 NM_001366018 55658 Hs.69554 NM_017876 ENSG00000070423 RNF126 - ring finger protein 126 protein-coding chr17-1318 chr17 81910707 81910917 + 13.9 0.000 intron (NM_002861, intron 1 of 12) CpG 363 NM_001282203 5833 Hs.569843 NM_002861 ENSG00000185813 PCYT2 ET phosphate cytidylyltransferase 2, ethanolamine protein-coding chr12-2310 chr12 123990558 123990768 + 13.9 0.000 intron (NM_001204298, intron 3 of 4) intron (NM_001204298, intron 3 of 4) 17448 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr1-6755 chr1 69133507 69133717 + 13.9 0.000 intron (NR_146608, intron 3 of 4) intron (NR_146608, intron 3 of 4) 77714 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr18-780 chr18 36158348 36158558 + 13.9 0.000 intron (NR_040110, intron 13 of 21) intron (NR_040110, intron 13 of 21) 28554 NM_001242877 55250 Hs.8739 NM_018255 ENSG00000134759 ELP2 MRT58|SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding chr1-2986 chr1 183044385 183044595 + 13.9 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 21070 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr16-4365 chr16 47156214 47156424 + 13.9 0.000 intron (NM_030790, intron 17 of 17) AluSx1|SINE|Alu 12251 NR_110903 101927102 Hs.634652 NR_110903 ITFG1-AS1 - ITFG1 antisense RNA 1 ncRNA chr3-1720 chr3 90184968 90185178 + 13.9 0.000 Intergenic LTR16A2|LTR|ERVL 1077452 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr17-2081 chr17 79048408 79048618 + 13.9 0.000 non-coding (NR_049769, exon 4 of 4) non-coding (NR_049769, exon 4 of 4) 14214 NM_198593 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and TNF related 1 protein-coding chr2-3657 chr2 166960456 166960666 + 13.9 0.000 intron (NM_152381, intron 2 of 10) intron (NM_152381, intron 2 of 10) 72074 NM_001199143 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr1-656 chr1 227788054 227788264 + 13.9 0.000 Intergenic CpG -27558 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr2-2443 chr2 62461824 62462034 + 13.9 0.000 Intergenic Intergenic 44266 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr19-1281 chr19 41310268 41310478 + 13.9 0.000 promoter-TSS (NM_001346100) promoter-TSS (NM_001346100) -104 NM_001346100 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr11-1285 chr11 102410427 102410637 + 13.9 0.000 intron (NM_052932, intron 2 of 4) intron (NM_052932, intron 2 of 4) 42233 NM_052932 114908 Hs.503709 NM_052932 ENSG00000152558 TMEM123 KCT3|PORIMIN|PORMIN transmembrane protein 123 protein-coding chr3-832 chr3 172711145 172711355 + 13.9 0.000 promoter-TSS (NM_001146278) promoter-TSS (NM_001146278) -183 NM_001146277 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr4-679 chr4 124449150 124449360 + 13.9 0.000 Intergenic Intergenic 109179 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr11-1798 chr11 116984630 116984840 + 13.9 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 113693 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr11-3103 chr11 32510828 32511038 + 13.9 0.000 Intergenic Intergenic -72898 NM_001307929 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr4-1338 chr4 163353196 163353406 + 13.9 0.000 Intergenic Intergenic 9199 NM_001317091 4889 Hs.519058 NM_006174 ENSG00000164129 NPY5R NPY5-R|NPYR5|NPYY5-R neuropeptide Y receptor Y5 protein-coding chr14-1029 chr14 61537641 61537851 + 13.9 0.000 intron (NM_006255, intron 12 of 13) intron (NM_006255, intron 12 of 13) 32448 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr6-1143 chr6 158283776 158283986 + 13.9 0.000 Intergenic Intergenic -28584 NM_001007466 56995 Hs.486993 NM_020245 ENSG00000130338 TULP4 TUSP TUB like protein 4 protein-coding chr10-1833 chr10 26486445 26486655 + 13.9 0.000 intron (NM_019043, intron 2 of 14) intron (NM_019043, intron 2 of 14) 48209 NM_019043 54518 Hs.310421 NM_019043 ENSG00000077420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta precursor protein binding family B member 1 interacting protein protein-coding chr11-6128 chr11 39583802 39584012 + 13.9 0.000 Intergenic Intergenic 709223 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr17-2329 chr17 50660808 50661018 + 13.9 0.000 intron (NM_003786, intron 7 of 30) intron (NM_003786, intron 7 of 30) 26032 NM_001144070 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr12-1319 chr12 50616108 50616318 + 13.9 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 111228 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr11-1515 chr11 76799335 76799545 + 13.9 0.000 Intergenic CpG 7688 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr22-996 chr22 41909227 41909437 + 13.9 0.000 TTS (NM_001353438) TTS (NM_001353438) 5742 NM_001353439 440829 Hs.526704 NM_001207020 ENSG00000234965 SHISA8 C22orf17|Orf26 shisa family member 8 protein-coding chr8-3768 chr8 23952478 23952688 + 13.9 0.000 Intergenic Intergenic -97777 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr2-2213 chr2 96264950 96265160 + 13.9 0.000 intron (NM_017849, intron 2 of 3) intron (NM_017849, intron 2 of 3) 942 NM_001193304 55654 Hs.164303 NM_017849 ENSG00000135956 TMEM127 - transmembrane protein 127 protein-coding chr6-3645 chr6 133512511 133512721 + 13.9 0.000 intron (NR_109982, intron 6 of 8) intron (NR_109982, intron 6 of 8) 271117 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr8-922 chr8 13406417 13406627 + 13.9 0.000 intron (NM_024767, intron 2 of 4) Plat_L3|LINE|CR1 108329 NM_182643 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr11-1954 chr11 124897242 124897452 + 13.9 0.000 intron (NM_019055, intron 1 of 17) intron (NM_019055, intron 1 of 17) 518 NM_001301088 54538 Hs.524121 NM_019055 ENSG00000154133 ROBO4 ECSM4|MRB roundabout guidance receptor 4 protein-coding chr1-9347 chr1 28772421 28772631 + 13.9 0.000 Intergenic L1MC4a|LINE|L1 35586 NM_001172828 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr2-5765 chr2 222025089 222025299 + 13.9 0.000 Intergenic Intergenic -272953 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr22-1026 chr22 31584194 31584404 + 13.9 0.000 intron (NM_001007467, intron 13 of 32) intron (NM_001007467, intron 13 of 32) 37232 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr8-2559 chr8 33490501 33490711 + 13.9 0.000 intron (NM_032509, intron 6 of 9) MER46C|DNA|TcMar-Tigger 5424 NM_032509 84549 Hs.583805 NM_032509 ENSG00000198042 MAK16 MAK16L|RBM13 MAK16 homolog protein-coding chr1-3997 chr1 162062736 162062946 + 13.9 0.000 Intergenic Intergenic -6850 NM_014697 9722 Hs.731942 NM_014697 ENSG00000198929 NOS1AP 6330408P19Rik|CAPON nitric oxide synthase 1 adaptor protein protein-coding chr3-2294 chr3 111081251 111081461 + 13.9 0.000 intron (NM_001243288, intron 1 of 8) intron (NM_001243288, intron 1 of 8) 9540 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding GL000225.1-29 GL000225.1 33684 33894 + 13.9 0.000 NA NA NA NA chr2-2864 chr2 168545631 168545841 + 13.9 0.000 intron (NM_001256126, intron 1 of 10) intron (NM_001256126, intron 1 of 10) -37207 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr9-2791 chr9 116594632 116594842 + 13.9 0.000 intron (NM_014010, intron 18 of 21) intron (NM_014010, intron 18 of 21) 90454 NR_033973 100128505 Hs.675821 NR_033973 ENSG00000229105 ASTN2-AS1 - ASTN2 antisense RNA 1 ncRNA chr6-712 chr6 84244509 84244719 + 13.9 0.000 Intergenic SVA_D|Retroposon|SVA -16971 NM_001286206 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding chr3-2346 chr3 146746394 146746604 + 13.9 0.000 Intergenic Intergenic -140283 NM_001085420 389158 Hs.254692 NM_001085420 ENSG00000231213 PLSCR5 - phospholipid scramblase family member 5 protein-coding chr11-1752 chr11 128061557 128061767 + 13.9 0.000 Intergenic Intergenic -147104 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr6-3196 chr6 131375835 131376045 + 13.9 0.000 Intergenic Intergenic 125536 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr14-2817 chr14 23148714 23148924 + 13.9 0.000 intron (NM_012244, intron 3 of 10) MLT1D|LTR|ERVL-MaLR 5574 NM_182728 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr17-2331 chr17 50987227 50987437 + 13.9 0.000 intron (NM_001130527, intron 21 of 29) AluJb|SINE|Alu 59546 NM_001251971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr14-1603 chr14 98846201 98846411 + 13.9 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 134693 NR_161368 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr11-3286 chr11 84780858 84781068 + 13.9 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) -60021 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-4727 chr12 51216415 51216625 + 13.9 0.000 intron (NM_001368008, intron 1 of 2) intron (NM_001368008, intron 1 of 2) 785 NM_001368008 5463 Hs.555886 NM_002702 ENSG00000184271 POU6F1 BRN5|MPOU|TCFB1 POU class 6 homeobox 1 protein-coding chr19-1172 chr19 7535376 7535586 + 13.9 0.000 promoter-TSS (NM_001166114) promoter-TSS (NM_001166114) -236 NM_001166114 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chr22-900 chr22 22815240 22815450 + 13.9 0.000 Intergenic Intergenic -7431 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr8-4269 chr8 94002474 94002684 + 13.9 0.000 Intergenic L1MD2|LINE|L1 85632 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chrX-493 chrX 40263224 40263434 + 13.9 0.000 non-coding (NR_110386, exon 1 of 3) non-coding (NR_110386, exon 1 of 3) 412 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr11-6228 chr11 47071743 47071953 + 13.9 0.000 intron (NM_001003677, intron 3 of 8) intron (NM_001003677, intron 3 of 8) 105031 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr13-817 chr13 29158945 29159155 + 13.9 0.000 intron (NM_001033602, intron 3 of 13) L1M5|LINE|L1 134593 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr12-784 chr12 42237469 42237679 + 13.9 0.000 intron (NM_001190980, intron 2 of 2) CpG 794 NR_135140 10138 Hs.649195 NM_005748 ENSG00000015153 YAF2 - YY1 associated factor 2 protein-coding chr2-4140 chr2 170155298 170155508 + 13.9 0.000 Intergenic Intergenic -22744 NR_045684 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr1-7976 chr1 202067593 202067803 + 13.9 0.000 Intergenic HERV16-int|LTR|ERVL -55219 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr15-679 chr15 88897305 88897515 + 13.9 0.000 Intergenic Intergenic -1866 NM_178232 145864 Hs.447530 NM_178232 ENSG00000140511 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding chr16-1843 chr16 66682409 66682619 + 13.9 0.000 intron (NM_181521, intron 1 of 3) intron (NM_181521, intron 1 of 3) 14229 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr21-895 chr21 16117899 16118109 + 13.9 0.000 intron (NR_111005, intron 1 of 6) intron (NR_111005, intron 1 of 6) 46890 NR_111005 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr16-4263 chr16 23810632 23810842 + 13.9 0.000 Intergenic Intergenic -25246 NM_212535 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr5-2379 chr5 87754097 87754307 + 13.9 0.000 Intergenic Intergenic 92160 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr3-813 chr3 56682607 56682817 + 13.9 0.000 exon (NM_001365637, exon 1 of 24) exon (NM_001365637, exon 1 of 24) 525 NM_001363940 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chrX-541 chrX 149505181 149505391 + 13.9 0.000 promoter-TSS (NM_000202) promoter-TSS (NM_000202) 20 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr20-1217 chr20 18496138 18496348 + 13.9 0.000 intron (NM_006606, intron 1 of 4) intron (NM_006606, intron 1 of 4) 982 NM_006606 10741 Hs.69330 NM_006606 ENSG00000089050 RBBP9 BOG|RBBP10 RB binding protein 9, serine hydrolase protein-coding chr20-1079 chr20 44399536 44399746 + 13.9 0.000 intron (NM_001287183, intron 2 of 10) (CTCA)n|Simple_repeat|Simple_repeat -1598 NM_178850 3172 Hs.116462 NM_000457 ENSG00000101076 HNF4A FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14 hepatocyte nuclear factor 4 alpha protein-coding chr13-723 chr13 77752600 77752810 + 13.9 0.000 intron (NM_001242868, intron 4 of 6) MLT2A2|LTR|ERVL 11486 NM_001366666 122060 Hs.349955 NM_144595 ENSG00000139737 SLAIN1 C13orf32 SLAIN motif family member 1 protein-coding chr1-5787 chr1 170745188 170745398 + 13.9 0.000 Intergenic Intergenic 81162 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr11-3885 chr11 97293830 97294040 + 13.9 0.000 Intergenic Intergenic 785510 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr4-1558 chr4 1104609 1104819 + 13.9 0.000 intron (NR_159500, intron 1 of 4) intron (NR_159500, intron 1 of 4) 8850 NM_194439 285498 Hs.248290 NM_194439 ENSG00000178222 RNF212 ZHP3 ring finger protein 212 protein-coding chr1-3814 chr1 19622314 19622524 + 13.9 0.000 intron (NM_001032363, intron 2 of 3) intron (NM_001032363, intron 2 of 3) 14612 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo chr12-2027 chr12 51632235 51632445 + 13.9 0.000 intron (NM_001369788, intron 1 of 25) intron (NM_001369788, intron 1 of 25) 41104 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr12-2049 chr12 93699413 93699623 + 13.9 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) 20749 NM_001330126 8738 Hs.38533 NM_003805 ENSG00000169372 CRADD MRT34|RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding chr4-2445 chr4 168634346 168634556 + 13.9 0.000 intron (NM_001166109, intron 1 of 18) intron (NM_001166109, intron 1 of 18) 2873 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr9-1789 chr9 137467098 137467308 + 13.9 0.000 intron (NM_001098537, intron 26 of 34) intron (NM_001098537, intron 26 of 34) -7869 NM_015537 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr15-749 chr15 57647734 57647944 + 13.9 0.000 intron (NR_104367, intron 11 of 15) intron (NR_104367, intron 11 of 15) 55935 NR_104371 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr1-6668 chr1 50247276 50247486 + 13.9 0.000 Intergenic Intergenic 137548 NM_001324217 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding chr3-5579 chr3 6644186 6644396 + 13.9 0.000 intron (NR_110123, intron 2 of 3) MamRep137|DNA|TcMar? 161158 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr1-1918 chr1 244414644 244414854 + 13.9 0.000 intron (NM_001126, intron 11 of 12) LTR16|LTR|ERVL 37160 NM_001126 159 Hs.498313 NM_001126 ENSG00000035687 ADSS ADEH|ADSS 2|ADSS2 adenylosuccinate synthase protein-coding chr20-634 chr20 50251992 50252202 + 13.9 0.000 Intergenic L2b|LINE|L2 -15389 NM_001278655 100506115 Hs.235484 NM_001278655 SMIM25 GCRL1|LINC01272 small integral membrane protein 25 protein-coding chr4-1108 chr4 17614302 17614512 + 13.9 0.000 promoter-TSS (NM_025205) promoter-TSS (NM_025205) -234 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chr1-1247 chr1 155172939 155173149 + 13.9 0.000 promoter-TSS (NM_001282378) promoter-TSS (NM_001282378) 284 NM_173852 200185 Hs.516671 NM_173852 ENSG00000163463 KRTCAP2 KCP2 keratinocyte associated protein 2 protein-coding chr20-1035 chr20 47776766 47776976 + 13.9 0.000 intron (NM_198596, intron 1 of 20) intron (NM_198596, intron 1 of 20) 9193 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr6-2399 chr6 149302802 149303012 + 13.9 0.000 intron (NM_001292035, intron 2 of 6) MER1A|DNA|hAT-Charlie -14805 NM_001292034 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr11-2164 chr11 111854233 111854443 + 13.9 0.000 intron (NR_147984, intron 6 of 15) AluSx|SINE|Alu 16943 NM_001352419 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chr17-2644 chr17 16587996 16588206 + 13.9 0.000 Intergenic Intergenic -18889 NM_001346171 57336 Hs.99724 NM_020653 ENSG00000141040 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding chr2-2950 chr2 18740424 18740634 + 13.9 0.000 Intergenic Intergenic -150949 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr11-6359 chr11 64095048 64095258 + 13.9 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -8737 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr12-7872 chr12 105323224 105323434 + 13.9 0.000 intron (NR_131986, intron 1 of 2) intron (NR_131986, intron 1 of 2) 3688 NR_131986 105369954 Hs.368938 NR_131986 ENSG00000257642 KCCAT198 - renal clear cell carcinoma-associated transcript 198 ncRNA chr16-3623 chr16 85015869 85016079 + 13.9 0.000 Intergenic MER4D1|LTR|ERV1 -4439 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr10-1906 chr10 124049586 124049796 + 13.9 0.000 intron (NM_001270765, intron 1 of 5) MER21C|LTR|ERVL 42715 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr1-4944 chr1 51664873 51665083 + 13.9 0.000 intron (NM_001350209, intron 2 of 23) intron (NM_001350209, intron 2 of 23) 47886 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr12-1017 chr12 15928487 15928697 + 13.9 0.000 intron (NM_015954, intron 1 of 8) intron (NM_015954, intron 1 of 8) 17260 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr17-2716 chr17 65359047 65359257 + 13.9 0.000 Intergenic MER74A|LTR|ERVL -98389 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr6-4100 chr6 150719912 150720122 + 13.9 0.000 intron (NM_001329800, intron 1 of 15) intron (NM_001329800, intron 1 of 15) -1082 NM_001329803 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr22-741 chr22 46432498 46432708 + 13.9 0.000 intron (NM_014246, intron 5 of 34) intron (NM_014246, intron 5 of 34) 96889 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr10-1930 chr10 1632220 1632430 + 13.9 0.000 intron (NM_018702, intron 1 of 9) (AC)n|Simple_repeat|Simple_repeat 85565 NR_152792 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr7-2790 chr7 79317756 79317966 + 13.9 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) -135096 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr12-5314 chr12 112567037 112567247 + 13.9 0.000 Intergenic THE1D|LTR|ERVL-MaLR -8094 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr12-1425 chr12 56237741 56237951 + 13.9 0.000 TTS (NM_001135195) TTS (NM_001135195) 7129 NM_001135195 283375 Hs.591018 NM_173596 ENSG00000139540 SLC39A5 LZT-Hs7|MYP24|ZIP5 solute carrier family 39 member 5 protein-coding chr10-2464 chr10 20898962 20899172 + 13.9 0.000 intron (NM_001173484, intron 4 of 6) intron (NM_001173484, intron 4 of 6) -1465 NM_006393 10529 Hs.5025 NM_006393 ENSG00000078114 NEBL LASP2|LNEBL nebulette protein-coding chr17-3027 chr17 77694714 77694924 + 13.9 0.000 Intergenic LTR16B|LTR|ERVL 33740 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr9-2484 chr9 79671612 79671822 + 13.9 0.000 intron (NR_104239, intron 9 of 20) intron (NR_104239, intron 9 of 20) 98540 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr9-1632 chr9 134253594 134253804 + 13.9 0.000 Intergenic Intergenic 41698 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr11-2686 chr11 78797069 78797279 + 13.9 0.000 intron (NM_001098816, intron 15 of 33) MIRb|SINE|MIR -222310 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr16-2034 chr16 30362947 30363157 + 13.9 0.000 intron (NM_015527, intron 4 of 8) AluSx1|SINE|Alu 7442 NM_015527 26000 Hs.632182 NM_015527 ENSG00000169221 TBC1D10B EPI64B|FP2461 TBC1 domain family member 10B protein-coding chr1-7026 chr1 172286831 172287041 + 13.9 0.000 intron (NR_146559, intron 16 of 20) intron (NR_146559, intron 16 of 20) -133749 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr3-3136 chr3 158918103 158918313 + 13.9 0.000 Intergenic Intergenic 116154 NR_110328 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr10-1055 chr10 96831829 96832039 + 13.9 0.000 promoter-TSS (NM_001170765) promoter-TSS (NM_001170765) -364 NM_001170765 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr10-2311 chr10 43356102 43356312 + 13.9 0.000 Intergenic LTR8|LTR|ERV1 -15429 NM_173160 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr2-1934 chr2 213284239 213284449 + 13.9 0.000 promoter-TSS (NM_024532) promoter-TSS (NM_024532) -35 NM_001025436 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr6-1247 chr6 4402533 4402743 + 13.9 0.000 Intergenic Intergenic -86160 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr3-1227 chr3 107118197 107118407 + 13.9 0.000 intron (NR_028303, intron 2 of 3) intron (NR_028303, intron 2 of 3) 122336 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr1-2227 chr1 156082935 156083145 + 13.9 0.000 promoter-TSS (NM_001093725) promoter-TSS (NM_001093725) 494 NM_001282625 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr7-3555 chr7 16637514 16637724 + 13.9 0.000 intron (NM_020319, intron 1 of 9) intron (NM_020319, intron 1 of 9) 8135 NM_020319 57037 Hs.157378 NM_020319 ENSG00000106524 ANKMY2 ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding chr1-5353 chr1 234515358 234515568 + 13.9 0.000 Intergenic Intergenic 16316 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr10-2743 chr10 116947854 116948064 + 13.9 0.000 intron (NM_001127211, intron 7 of 16) intron (NM_001127211, intron 7 of 16) 57228 NM_018330 57698 Hs.501140 NM_018330 ENSG00000187164 SHTN1 KIAA1598|shootin-1 shootin 1 protein-coding chr8-1895 chr8 24520651 24520861 + 13.9 0.000 intron (NR_125808, intron 1 of 5) intron (NR_125808, intron 1 of 5) -5888 NR_125809 101929315 Hs.125562 NR_125809 ENSG00000253643 LOC101929315 - uncharacterized LOC101929315 ncRNA chr19-3384 chr19 13261030 13261240 + 13.9 0.000 intron (NM_023035, intron 26 of 46) MER46C|DNA|TcMar-Tigger 110724 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr7-1374 chr7 119720532 119720742 + 13.9 0.000 intron (NR_131962, intron 2 of 2) intron (NR_131962, intron 2 of 2) 186738 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr22-1292 chr22 39466279 39466489 + 13.9 0.000 intron (NM_002409, intron 1 of 1) intron (NM_002409, intron 1 of 1) 9372 NM_002409 4248 Hs.276808 NM_002409 ENSG00000128268 MGAT3 GNT-III|GNT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase protein-coding chr6-2386 chr6 144264439 144264649 + 13.9 0.000 Intergenic Intergenic -27193 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr2-4035 chr2 108923992 108924202 + 13.9 0.000 intron (NM_022336, intron 4 of 11) intron (NM_022336, intron 4 of 11) 65123 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr13-683 chr13 24254089 24254299 + 13.9 0.000 intron (NR_046531, intron 1 of 2) intron (NR_046531, intron 1 of 2) 245 NR_046531 100874231 Hs.577998 NR_046531 ENSG00000227213 SPATA13-AS1 - SPATA13 antisense RNA 1 ncRNA chr17-2876 chr17 34018100 34018310 + 13.9 0.000 intron (NM_001094, intron 1 of 9) Tigger1|DNA|TcMar-Tigger 138601 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr12-1698 chr12 127285100 127285310 + 13.9 0.000 promoter-TSS (NR_146537) promoter-TSS (NR_146537) -922 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr17-1041 chr17 78490833 78491043 + 13.9 0.000 intron (NM_173628, intron 43 of 80) intron (NM_173628, intron 43 of 80) 6028 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr2-5644 chr2 192489331 192489541 + 13.9 0.000 Intergenic HERVL-int|LTR|ERVL -260409 NR_002769 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr17-915 chr17 80220145 80220355 + 13.9 0.000 promoter-TSS (NM_001166347) promoter-TSS (NM_001166347) 83 NM_001352921 6448 Hs.31074 NM_000199 ENSG00000181523 SGSH HSS|MPS3A|SFMD N-sulfoglucosamine sulfohydrolase protein-coding chr8-1499 chr8 52562200 52562410 + 13.9 0.000 intron (NM_207413, intron 1 of 4) intron (NM_207413, intron 1 of 4) 3125 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr2-3631 chr2 129282614 129282824 + 13.9 0.000 Intergenic L1ME3B|LINE|L1 -8828 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr4-486 chr4 88523730 88523940 + 13.9 0.000 promoter-TSS (NM_032906) promoter-TSS (NM_032906) 25 NR_134663 101929134 Hs.734064 NR_134662 ENSG00000285122 PIGY-DT - PIGY divergent transcript ncRNA chr1-2116 chr1 183270790 183271000 + 13.9 0.000 intron (NM_170706, intron 8 of 10) intron (NM_170706, intron 8 of 10) 33979 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr9-1881 chr9 108444706 108444916 + 13.9 0.000 Intergenic Intergenic 411175 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr3-1473 chr3 65979836 65980046 + 13.9 0.000 intron (NM_001365904, intron 1 of 24) MamSINE1|SINE|tRNA-RTE -25383 NR_145422 151877 Hs.476636 NR_145422 ENSG00000272610 MAGI1-IT1 - MAGI1 intronic transcript 1 ncRNA chr16-1235 chr16 396537 396747 + 13.9 0.000 promoter-TSS (NM_001286436) promoter-TSS (NM_001286436) -87 NM_001286436 4833 Hs.9235 NM_005009 ENSG00000103202 NME4 NDPK-D|NM23H4|nm23-H4 NME/NM23 nucleoside diphosphate kinase 4 protein-coding chr7-5782 chr7 77758448 77758658 + 13.9 0.000 intron (NM_198467, intron 3 of 7) L1MA1|LINE|L1 39881 NM_032936 85025 Hs.19025 NM_032936 ENSG00000135211 TMEM60 C7orf35|DC32 transmembrane protein 60 protein-coding chr16-2408 chr16 70767918 70768128 + 13.9 0.000 intron (NR_034083, intron 4 of 5) AluJb|SINE|Alu 12928 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr20-453 chr20 45293699 45293909 + 13.9 0.000 exon (NM_030590, exon 9 of 9) exon (NM_030590, exon 9 of 9) -13036 NM_001281448 11317 Hs.248217 NM_014276 ENSG00000124232 RBPJL RBPL|RBPSUHL|SUHL recombination signal binding protein for immunoglobulin kappa J region like protein-coding chr7-2045 chr7 102860448 102860658 + 13.9 0.000 intron (NR_105043, intron 17 of 20) intron (NR_105043, intron 17 of 20) -52447 NM_001031692 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr2-5246 chr2 51247034 51247244 + 13.9 0.000 intron (NR_135237, intron 2 of 10) MLT1C|LTR|ERVL-MaLR 214538 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr5-4005 chr5 25407410 25407620 + 13.9 0.000 Intergenic L1PREC2|LINE|L1 216562 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr2-9010 chr2 195793945 195794155 + 13.9 0.000 intron (NM_018897, intron 57 of 64) intron (NM_018897, intron 57 of 64) 136824 NM_020342 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr8-4511 chr8 120927336 120927546 + 13.9 0.000 Intergenic LTR33|LTR|ERVL -115395 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr7-2401 chr7 55194784 55194994 + 13.9 0.000 intron (NM_001346941, intron 16 of 21) intron (NM_001346941, intron 16 of 21) -5940 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr11-1818 chr11 12732631 12732841 + 13.9 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 58315 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11-4322 chr11 70087361 70087571 + 13.9 0.000 intron (NR_030691, intron 1 of 24) intron (NR_030691, intron 1 of 24) 2056 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr3-1158 chr3 108091060 108091270 + 13.9 0.000 promoter-TSS (NM_001777) promoter-TSS (NM_001777) -77 NM_001777 961 Hs.446414 NM_001777 ENSG00000196776 CD47 IAP|MER6|OA3 CD47 molecule protein-coding chr12-2392 chr12 30691200 30691410 + 13.9 0.000 intron (NM_006390, intron 1 of 24) intron (NM_006390, intron 1 of 24) 4564 NM_006390 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr22-713 chr22 19751217 19751427 + 13.9 0.000 Intergenic Intergenic -5381 NM_080647 6899 Hs.173984 NM_005992 ENSG00000184058 TBX1 CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS T-box transcription factor 1 protein-coding chr10-5703 chr10 100574681 100574891 + 13.9 0.000 Intergenic Intergenic 38843 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr22-645 chr22 31149115 31149325 + 13.9 0.000 Intergenic Intergenic -8712 NM_015715 50487 Hs.149623 NM_015715 ENSG00000100078 PLA2G3 GIII-SPLA2|SPLA2III|sPLA2-III phospholipase A2 group III protein-coding chr1-2810 chr1 17551467 17551677 + 13.9 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) 11874 NM_018125 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr1-2056 chr1 9202139 9202349 + 13.9 0.000 Intergenic Intergenic -19906 NR_132742 106614088 Hs.551837 NR_132742 ENSG00000228526 MIR34AHG - MIR34A host gene ncRNA chr8-1246 chr8 124845895 124846105 + 13.9 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -23942 NR_039809 100616255 NR_039809 ENSG00000263735 MIR4662B - microRNA 4662b ncRNA chr9-2006 chr9 131709646 131709856 + 13.9 0.000 promoter-TSS (NM_198679) promoter-TSS (NM_198679) 91 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr19-1687 chr19 9827646 9827856 + 13.9 0.000 promoter-TSS (NM_024292) promoter-TSS (NM_024292) -167 NM_001048241 59286 Hs.534477 NM_024292 ENSG00000198258 UBL5 HUB1 ubiquitin like 5 protein-coding chr17-2512 chr17 2075499 2075709 + 13.9 0.000 intron (NM_001256827, intron 8 of 11) intron (NM_001256827, intron 8 of 11) 13157 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr8-1233 chr8 119978338 119978548 + 13.9 0.000 intron (NM_022783, intron 4 of 8) intron (NM_022783, intron 4 of 8) 104721 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr4-2100 chr4 48110553 48110763 + 13.9 0.000 intron (NM_003328, intron 4 of 14) intron (NM_003328, intron 4 of 14) 23592 NM_003328 7294 Hs.479669 NM_003328 ENSG00000074966 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding chr22-577 chr22 23717228 23717438 + 13.9 0.000 promoter-TSS (NR_024448) promoter-TSS (NR_024448) 90 NR_024448 91316 Hs.148656 NR_024448 ENSG00000228315 GUSBP11 - GUSB pseudogene 11 pseudo chr11-2560 chr11 103633525 103633735 + 13.9 0.000 Intergenic Intergenic -216276 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr8-2001 chr8 96219844 96220054 + 13.9 0.000 Intergenic Intergenic 15685 NM_006294 7381 Hs.131255 NM_006294 ENSG00000156467 UQCRB MC3DN3|QCR7|QP-C|QPC|UQBC|UQBP|UQCR6|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding chr15-505 chr15 39624950 39625160 + 13.9 0.000 intron (NM_152597, intron 10 of 11) intron (NM_152597, intron 10 of 11) 43976 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr9-6078 chr9 137181568 137181778 + 13.9 0.000 intron (NM_013366, intron 7 of 12) intron (NM_013366, intron 7 of 12) 6887 NM_013366 29882 Hs.533262 NM_013366 ENSG00000176248 ANAPC2 APC2 anaphase promoting complex subunit 2 protein-coding chr3-2764 chr3 151434319 151434529 + 13.9 0.000 3' UTR (NM_001178145, exon 2 of 2) 3' UTR (NM_001178145, exon 2 of 2) 6356 NM_001178145 285313 Hs.58561 NM_178822 ENSG00000152580 IGSF10 CMF608 immunoglobulin superfamily member 10 protein-coding chr3-1608 chr3 4986735 4986945 + 13.9 0.000 Intergenic CpG -6879 NR_125916 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr17-906 chr17 74842880 74843090 + 13.9 0.000 exon (NM_000835, exon 13 of 13) exon (NM_000835, exon 13 of 13) 16899 NR_103735 2905 Hs.436980 NM_000835 ENSG00000161509 GRIN2C GluN2C|NMDAR2C|NR2C glutamate ionotropic receptor NMDA type subunit 2C protein-coding chr9-1587 chr9 93682237 93682447 + 13.9 0.000 Intergenic Intergenic 87501 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr16-1501 chr16 14334839 14335049 + 13.9 0.000 Intergenic Intergenic 25659 NR_029854 100126355 NR_029854 ENSG00000199130 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a|mir-365a microRNA 365a ncRNA chr9-3667 chr9 96708351 96708561 + 13.9 0.000 Intergenic Intergenic -17365 NR_026792 441455 Hs.229613 NR_026792 LOC441455 - makorin ring finger protein 1 pseudogene pseudo chr8-1338 chr8 59118717 59118927 + 13.9 0.000 promoter-TSS (NR_149030) promoter-TSS (NR_149030) 325 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr6-1395 chr6 113879468 113879678 + 13.9 0.000 Intergenic Intergenic -6226 NR_038863 285758 Hs.359399 NR_038863 ENSG00000227502 LINC01268 ROCKI long intergenic non-protein coding RNA 1268 ncRNA chr10-4835 chr10 13433035 13433245 + 13.9 0.000 Intergenic Intergenic 69836 NM_152751 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr20-582 chr20 4949963 4950173 + 13.9 0.000 intron (NM_005116, intron 2 of 16) intron (NM_005116, intron 2 of 16) 51442 NM_005116 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr2-2298 chr2 70248746 70248956 + 13.9 0.000 promoter-TSS (NM_001351517) promoter-TSS (NM_001351517) -58 NM_001351512 7072 Hs.413123 NM_022037 ENSG00000116001 TIA1 TIA-1|WDM TIA1 cytotoxic granule associated RNA binding protein protein-coding chr7-2810 chr7 93117822 93118032 + 13.9 0.000 promoter-TSS (NM_001193307) promoter-TSS (NM_001193307) 52 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding chr18-698 chr18 46193081 46193291 + 13.9 0.000 intron (NM_001008239, intron 1 of 3) intron (NM_001008239, intron 1 of 3) 19152 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr6-894 chr6 116279691 116279901 + 13.9 0.000 promoter-TSS (NR_136521) promoter-TSS (NR_136521) -290 NR_136521 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr2-5648 chr2 195613974 195614184 + 13.9 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -42879 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr18-566 chr18 26540040 26540250 + 13.9 0.000 intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) 8408 NM_001142730 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr12-1760 chr12 79858646 79858856 + 13.9 0.000 intron (NM_001244990, intron 3 of 24) L2|LINE|L2 55160 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr13-854 chr13 100875875 100876085 + 13.9 0.000 intron (NR_047687, intron 2 of 7) intron (NR_047687, intron 2 of 7) 68384 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr1-2553 chr1 15409879 15410089 + 13.9 0.000 promoter-TSS (NM_024329) promoter-TSS (NM_024329) 96 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr15-1214 chr15 58139704 58139914 + 13.9 0.000 intron (NM_020980, intron 1 of 5) intron (NM_020980, intron 1 of 5) 1428 NM_001320635 366 Hs.104624 NM_020980 ENSG00000103569 AQP9 AQP-9|HsT17287|SSC1|T17287 aquaporin 9 protein-coding chr2-4251 chr2 222142090 222142300 + 13.8 0.000 Intergenic Intergenic -155952 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr17-2714 chr17 64801645 64801855 + 13.8 0.000 intron (NR_024386, intron 5 of 10) AluSx1|SINE|Alu -19751 NR_026899 109286553 Hs.117853 NR_026899 ENSG00000215769 ARHGAP27P1-BPTFP1-KPNA2P3 - ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene pseudo chr4-2687 chr4 2101623 2101833 + 13.8 0.000 intron (NM_181808, intron 19 of 25) L1M2|LINE|L1 42401 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr14-759 chr14 95010787 95010997 + 13.8 0.000 Intergenic Intergenic 122611 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr9-1867 chr9 76459878 76460088 + 13.8 0.000 intron (NM_001097633, intron 1 of 2) intron (NM_001097633, intron 1 of 2) 801 NM_001490 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr6-1162 chr6 28080907 28081117 + 13.8 0.000 5' UTR (NM_003447, exon 1 of 4) 5' UTR (NM_003447, exon 1 of 4) 444 NM_003447 7718 Hs.55481 NM_003447 ENSG00000197279 ZNF165 CT53|LD65|ZSCAN7 zinc finger protein 165 protein-coding chr12-1496 chr12 39329111 39329321 + 13.8 0.000 intron (NM_001173463, intron 22 of 33) intron (NM_001173463, intron 22 of 33) 113904 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr17-2983 chr17 67995203 67995413 + 13.8 0.000 Intergenic Intergenic -1702 NM_181656 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr5-2371 chr5 82538788 82538998 + 13.8 0.000 Intergenic Intergenic 259431 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr3-4057 chr3 78455565 78455775 + 13.8 0.000 Intergenic (TTTTTCG)n|Simple_repeat|Simple_repeat -406707 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr2-3964 chr2 69559634 69559844 + 13.8 0.000 intron (NM_014911, intron 2 of 21) intron (NM_014911, intron 2 of 21) -39568 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr6-1409 chr6 134517091 134517301 + 13.8 0.000 Intergenic MIR3|SINE|MIR 22809 NR_125855 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr1-3719 chr1 217482422 217482632 + 13.8 0.000 intron (NM_018040, intron 8 of 9) L2a|LINE|L2 148563 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr11-1518 chr11 102347741 102347951 + 13.8 0.000 intron (NM_001256163, intron 1 of 8) intron (NM_001256163, intron 1 of 8) 472 NM_001256163 329 Hs.696238 NM_001166 ENSG00000110330 BIRC2 API1|HIAP2|Hiap-2|MIHB|RNF48|c-IAP1|cIAP1 baculoviral IAP repeat containing 2 protein-coding chr1-6823 chr1 96918556 96918766 + 13.8 0.000 Intergenic Intergenic -177262 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr11-1911 chr11 65090656 65090866 + 13.8 0.000 Intergenic Intergenic -1652 NM_001282448 100130348 Hs.98170 NM_001242631 ENSG00000187066 TMEM262 - transmembrane protein 262 protein-coding chr9-1129 chr9 114038193 114038403 + 13.8 0.000 intron (NM_001318042, intron 13 of 14) intron (NM_001318042, intron 13 of 14) 40002 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr11-2084 chr11 94741378 94741588 + 13.8 0.000 Intergenic Intergenic -1128 NR_135093 105369438 Hs.568921 NR_135093 ENSG00000255929 LOC105369438 - uncharacterized LOC105369438 ncRNA chr9-2446 chr9 6968478 6968688 + 13.8 0.000 intron (NR_148680, intron 8 of 21) intron (NR_148680, intron 8 of 21) 211233 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr4-1472 chr4 3123211 3123421 + 13.8 0.000 intron (NM_002111, intron 10 of 66) MER58A|DNA|hAT-Charlie 48635 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr1-6827 chr1 97271094 97271304 + 13.8 0.000 intron (NR_046590, intron 2 of 4) intron (NR_046590, intron 2 of 4) 175276 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr6-3705 chr6 166989735 166989945 + 13.8 0.000 Intergenic Intergenic 8072 NR_037504 100500857 NR_037504 ENSG00000265828 MIR3939 mir-3939 microRNA 3939 ncRNA chr2-1086 chr2 186694006 186694216 + 13.8 0.000 promoter-TSS (NM_177454) promoter-TSS (NM_177454) 51 NM_177454 165215 Hs.28872 NM_177454 ENSG00000144369 FAM171B KIAA1946 family with sequence similarity 171 member B protein-coding chr2-2834 chr2 111744022 111744232 + 13.8 0.000 Intergenic Intergenic 27007 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr1-1854 chr1 41742339 41742549 + 13.8 0.000 intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 176478 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr4-1806 chr4 36346702 36346912 + 13.8 0.000 non-coding (NR_160267, exon 10 of 10) non-coding (NR_160267, exon 10 of 10) 65191 NR_160267 401124 Hs.363407 NM_001136536 ENSG00000197057 DTHD1 - death domain containing 1 protein-coding chr1-4848 chr1 27879624 27879834 + 13.8 0.000 exon (NM_001286113, exon 3 of 7) exon (NM_001286113, exon 3 of 7) 7185 NM_001105556 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1|ICB1 thymocyte selection associated family member 2 protein-coding chr11-1881 chr11 4020074 4020284 + 13.8 0.000 intron (NM_001277962, intron 2 of 12) L1MA6|LINE|L1 -74506 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr8-1390 chr8 27614093 27614303 + 13.8 0.000 intron (NM_001831, intron 1 of 8) intron (NM_001831, intron 1 of 8) 502 NM_001831 1191 Hs.436657 NM_001831 ENSG00000120885 CLU AAG4|APO-J|APOJ|CLI|CLU1|CLU2|KUB1|NA1/NA2|SGP-2|SGP2|SP-40|TRPM-2|TRPM2 clusterin protein-coding chr21-242 chr21 28771803 28772013 + 13.8 0.000 Intergenic Intergenic 113459 NM_013240 29104 Hs.163846 NM_013240 ENSG00000156239 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P N-6 adenine-specific DNA methyltransferase 1 protein-coding chr3-2241 chr3 46752642 46752852 + 13.8 0.000 TTS (NR_160552) TTS (NR_160552) 4108 NR_160552 100288960 NR_160552 PRSS43P PRSS43|TESSP3 serine protease 43, pseudogene pseudo chr8-904 chr8 101051494 101051704 + 13.8 0.000 promoter-TSS (NR_033962) promoter-TSS (NR_033962) -455 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr7-2835 chr7 101185337 101185547 + 13.8 0.000 Intergenic MIRb|SINE|MIR -5149 NM_001369694 375607 Hs.213044 NM_198571 ENSG00000167011 NAT16 C7orf52 N-acetyltransferase 16 (putative) protein-coding chr1-8195 chr1 21711144 21711354 + 13.8 0.000 intron (NM_001350167, intron 15 of 26) HAL1|LINE|L1 -41892 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr13-1143 chr13 30572986 30573196 + 13.8 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) 44496 NM_001370340 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr2-3075 chr2 108595187 108595397 + 13.8 0.000 intron (NM_001193488, intron 1 of 9) intron (NM_001193488, intron 1 of 9) 6986 NM_001193488 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr17-2587 chr17 76023738 76023948 + 13.8 0.000 intron (NM_001988, intron 2 of 21) intron (NM_001988, intron 2 of 21) 3463 NM_001320747 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr6-1659 chr6 152636238 152636448 + 13.8 0.000 intron (NM_182961, intron 2 of 145) intron (NM_182961, intron 2 of 145) 508 NM_033071 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr12-4131 chr12 69243257 69243467 + 13.8 0.000 intron (NM_007007, intron 1 of 9) MER44A|DNA|TcMar-Tigger 3793 NM_007007 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr8-1297 chr8 73481758 73481968 + 13.8 0.000 intron (NM_001164383, intron 8 of 9) intron (NM_001164383, intron 8 of 9) 61789 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA chr15-1329 chr15 89498345 89498555 + 13.8 0.000 Intergenic L1M5|LINE|L1 -1867 NR_110261 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr8-1856 chr8 6594290 6594500 + 13.8 0.000 intron (NM_024596, intron 12 of 13) intron (NM_024596, intron 12 of 13) 27825 NR_107022 102465861 NR_107022 ENSG00000276580 MIR8055 hsa-mir-8055 microRNA 8055 ncRNA chr1-794 chr1 156053812 156054022 + 13.8 0.000 promoter-TSS (NM_020131) promoter-TSS (NM_020131) -119 NM_020131 56893 Hs.283739 NM_020131 ENSG00000160803 UBQLN4 A1U|A1Up|C1orf6|CIP75|UBIN ubiquilin 4 protein-coding chr19-1224 chr19 12777754 12777964 + 13.8 0.000 Intergenic MIRb|SINE|MIR -2307 NM_001100176 29911 Hs.30792 NM_013312 ENSG00000095066 HOOK2 HK2 hook microtubule tethering protein 2 protein-coding chr12-1638 chr12 131611191 131611401 + 13.8 0.000 Intergenic Intergenic 36825 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr10-1233 chr10 71600923 71601133 + 13.8 0.000 intron (NM_052836, intron 9 of 12) intron (NM_052836, intron 9 of 12) -89108 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr1-4223 chr1 155522169 155522379 + 13.8 0.000 intron (NM_018489, intron 1 of 27) intron (NM_018489, intron 1 of 27) -39768 NR_147964 645676 Hs.568693 NR_027023 ENSG00000235919 ASH1L-AS1 - ASH1L antisense RNA 1 ncRNA chrX-335 chrX 119852737 119852947 + 13.8 0.000 exon (NM_080632, exon 1 of 11) exon (NM_080632, exon 1 of 11) 186 NM_080632 65109 Hs.103832 NM_023010 ENSG00000125351 UPF3B HUPF3B|MRX62|MRXS14|RENT3B|UPF3BP1|UPF3BP2|UPF3BP3|UPF3X|Upf3p-X UPF3B regulator of nonsense mediated mRNA decay protein-coding chr12-1970 chr12 120973439 120973649 + 13.8 0.000 Intergenic AluSz|SINE|Alu -1252 NR_024345 283460 Hs.612351 NR_024345 ENSG00000241388 HNF1A-AS1 C12orf27|HAS1|NCRNA00262 HNF1A antisense RNA 1 ncRNA chr16-1047 chr16 86517742 86517952 + 13.8 0.000 Intergenic Intergenic 7320 NM_001451 2294 Hs.155591 NM_001451 ENSG00000103241 FOXF1 ACDMPV|FKHL5|FREAC1 forkhead box F1 protein-coding chr22-2074 chr22 50076642 50076852 + 13.8 0.000 intron (NM_015166, intron 7 of 11) CpG 8605 NM_139202 23209 Hs.517729 NM_015166 ENSG00000100427 MLC1 LVM|MLC|VL modulator of VRAC current 1 protein-coding chr12-2241 chr12 65880072 65880282 + 13.8 0.000 intron (NR_120478, intron 1 of 2) intron (NR_120478, intron 1 of 2) 1401 NR_120478 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr20-1118 chr20 17654613 17654823 + 13.8 0.000 intron (NM_001042576, intron 4 of 25) intron (NM_001042576, intron 4 of 25) 27524 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr17-1459 chr17 47968050 47968260 + 13.8 0.000 Intergenic L2c|LINE|L2 -2373 NM_001278197 80279 Hs.20157 NM_025197 ENSG00000108465 CDK5RAP3 C53|HSF-27|IC53|LZAP|MST016|OK/SW-cl.114|PP1553 CDK5 regulatory subunit associated protein 3 protein-coding chr16-3927 chr16 84641505 84641715 + 13.8 0.000 Intergenic Intergenic -6901 NM_001303451 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr12-1779 chr12 106234399 106234609 + 13.8 0.000 Intergenic Intergenic 13516 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr1-3131 chr1 55156092 55156302 + 13.8 0.000 intron (NM_015306, intron 12 of 67) L2|LINE|L2 59167 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding chrX-1220 chrX 75825770 75825980 + 13.8 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -40621 NM_138703 139599 Hs.356869 NM_138703 ENSG00000186675 MAGEE2 HCA3 MAGE family member E2 protein-coding chr19-1865 chr19 18310176 18310386 + 13.8 0.000 intron (NM_012321, intron 3 of 4) intron (NM_012321, intron 3 of 4) 12795 NM_001252129 25804 Hs.515255 NM_012321 ENSG00000130520 LSM4 GRP|YER112W LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr6-2469 chr6 37303954 37304164 + 13.8 0.000 intron (NR_130108, intron 8 of 12) intron (NR_130108, intron 8 of 12) -45904 NM_001286401 221468 Hs.520101 NM_145316 ENSG00000172738 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding chr9-1209 chr9 124752961 124753171 + 13.8 0.000 intron (NM_001278546, intron 1 of 9) intron (NM_001278546, intron 1 of 9) 18245 NM_001489 2649 Hs.20131 NM_001489 ENSG00000148200 NR6A1 CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR nuclear receptor subfamily 6 group A member 1 protein-coding chr11-3332 chr11 115158117 115158327 + 13.8 0.000 Intergenic Intergenic -175355 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr9-1355 chr9 134216877 134217087 + 13.8 0.000 Intergenic Intergenic -52418 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr6-2739 chr6 89501448 89501658 + 13.8 0.000 intron (NM_001242809, intron 1 of 15) intron (NM_001242809, intron 1 of 15) -60765 NM_001242811 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr1-1628 chr1 156020399 156020609 + 13.8 0.000 intron (NM_003145, intron 1 of 5) intron (NM_003145, intron 1 of 5) 447 NM_003145 6746 Hs.74564 NM_003145 ENSG00000163479 SSR2 HSD25|TLAP|TRAP-BETA|TRAPB signal sequence receptor subunit 2 protein-coding chr2-626 chr2 112645632 112645842 + 13.8 0.000 promoter-TSS (NM_005415) promoter-TSS (NM_005415) -202 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding chr6-3823 chr6 35934292 35934502 + 13.8 0.000 Intergenic Intergenic -13217 NR_034069 6732 Hs.443861 NM_003137 ENSG00000096063 SRPK1 SFRSK1 SRSF protein kinase 1 protein-coding chr11-3734 chr11 27385310 27385520 + 13.8 0.000 exon (NM_001346432, exon 4 of 17) exon (NM_001346432, exon 4 of 17) -22167 NM_080654 91057 Hs.143733 NM_030771 ENSG00000109881 CCDC34 L15|NY-REN-41|RAMA3 coiled-coil domain containing 34 protein-coding chr3-3685 chr3 155282247 155282457 + 13.8 0.000 Intergenic MER51B|LTR|ERV1 11331 NM_001352129 100507537 Hs.518341 NM_001352129 ENSG00000240045 STRIT1 DWORF small transmembrane regulator of ion transport 1 protein-coding chr9-1718 chr9 111068606 111068816 + 13.8 0.000 Intergenic Intergenic -29713 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr16-1510 chr16 27368034 27368244 + 13.8 0.000 Intergenic Intergenic -34035 NM_181079 50615 Hs.210546 NM_021798 ENSG00000103522 IL21R CD360|IMD56|NILR interleukin 21 receptor protein-coding chr1-2490 chr1 159996844 159997054 + 13.8 0.000 Intergenic Intergenic 35041 NM_145167 93183 Hs.552810 NM_145167 ENSG00000143315 PIGM GPI-MT-I phosphatidylinositol glycan anchor biosynthesis class M protein-coding chr2-1423 chr2 189555192 189555402 + 13.8 0.000 Intergenic Intergenic 25514 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr13-569 chr13 37868709 37868919 + 13.8 0.000 intron (NM_003306, intron 1 of 10) intron (NM_003306, intron 1 of 10) 1611 NM_001135955 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr10-1214 chr10 17256039 17256249 + 13.8 0.000 Intergenic L2a|LINE|L2 -26159 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr1-2805 chr1 8477564 8477774 + 13.8 0.000 intron (NM_001042681, intron 10 of 22) intron (NM_001042681, intron 10 of 22) 17244 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr11-1657 chr11 1256174 1256384 + 13.8 0.000 promoter-TSS (NR_106802) promoter-TSS (NR_106802) -326 NR_106802 102466725 NR_106802 ENSG00000275669 MIR6744 hsa-mir-6744 microRNA 6744 ncRNA chr19-1184 chr19 34733899 34734109 + 13.8 0.000 promoter-TSS (NM_001145665) promoter-TSS (NM_001145665) -239 NM_001145665 339318 Hs.720472 NM_001029997 ENSG00000197841 ZNF181 HHZ181 zinc finger protein 181 protein-coding chr8-918 chr8 143221455 143221665 + 13.8 0.000 Intergenic Intergenic 8342 NM_001301772 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr15-658 chr15 62896989 62897199 + 13.8 0.000 Intergenic Intergenic 73137 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr19-717 chr19 45509369 45509579 + 13.8 0.000 intron (NM_003370, intron 1 of 12) intron (NM_003370, intron 1 of 12) 1995 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr13-429 chr13 49540668 49540878 + 13.8 0.000 3' UTR (NM_001352504, exon 12 of 12) 3' UTR (NM_001352504, exon 12 of 12) 43717 NM_001040444 51131 Hs.369039 NM_001040443 ENSG00000136147 PHF11 APY|BCAP|IGEL|IGER|IGHER|NY-REN-34|NYREN34 PHD finger protein 11 protein-coding chr2-1560 chr2 1686064 1686274 + 13.8 0.000 intron (NM_012293, intron 4 of 22) intron (NM_012293, intron 4 of 22) 58346 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr21-234 chr21 39676002 39676212 + 13.8 0.000 Intergenic Intergenic 18774 NM_033170 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr21-356 chr21 45081107 45081317 + 13.8 0.000 intron (NM_001346688, intron 1 of 11) intron (NM_001346688, intron 1 of 11) 6161 NM_001346688 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr2-2759 chr2 205245869 205246079 + 13.8 0.000 intron (NM_057177, intron 16 of 21) intron (NM_057177, intron 16 of 21) -436526 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr11-5126 chr11 128219528 128219738 + 13.8 0.000 intron (NR_146647, intron 3 of 3) intron (NR_146647, intron 3 of 3) 10867 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr10-3496 chr10 69502692 69502902 + 13.8 0.000 intron (NM_001351263, intron 3 of 5) intron (NM_001351263, intron 3 of 5) 51330 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr13-627 chr13 50910401 50910611 + 13.8 0.000 non-coding (NR_046552, exon 1 of 3) non-coding (NR_046552, exon 1 of 3) 206 NR_046552 100874255 Hs.741501 NR_046552 RNASEH2B-AS1 - RNASEH2B antisense RNA 1 ncRNA chr11-1355 chr11 60887742 60887952 + 13.8 0.000 Intergenic Intergenic 18738 NM_014502 27339 Hs.502705 NM_014502 ENSG00000110107 PRPF19 NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4 pre-mRNA processing factor 19 protein-coding chr5-1565 chr5 119366939 119367149 + 13.8 0.000 intron (NM_014350, intron 1 of 1) intron (NM_014350, intron 1 of 1) 11025 NM_014350 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr1-4097 chr1 229273808 229274018 + 13.8 0.000 intron (NM_001271998, intron 1 of 5) intron (NM_001271998, intron 1 of 5) -2759 NR_149312 105373159 NR_149312 LOC105373159 - uncharacterized LOC105373159 ncRNA chr5-2419 chr5 113119005 113119215 + 13.8 0.000 intron (NM_001085377, intron 6 of 18) intron (NM_001085377, intron 6 of 18) 142312 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr5-1625 chr5 122142368 122142578 + 13.8 0.000 intron (NM_207317, intron 1 of 1) intron (NM_207317, intron 1 of 1) 12927 NM_207317 133923 Hs.729673 NM_207317 ENSG00000164185 ZNF474 - zinc finger protein 474 protein-coding chr2-3812 chr2 25088658 25088868 + 13.8 0.000 intron (NM_001319099, intron 1 of 22) MIR|SINE|MIR 46300 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr5-5736 chr5 169892813 169893023 + 13.8 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 87577 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr9-2444 chr9 6630533 6630743 + 13.8 0.000 intron (NM_000170, intron 2 of 24) intron (NM_000170, intron 2 of 24) 15054 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr20-693 chr20 2751101 2751311 + 13.8 0.000 intron (NM_001110514, intron 11 of 17) intron (NM_001110514, intron 11 of 17) 49421 NM_019609 56265 Hs.659346 NM_019609 ENSG00000088882 CPXM1 CPX1|CPXM carboxypeptidase X, M14 family member 1 protein-coding chr5-1164 chr5 481385 481595 + 13.8 0.000 TTS (NR_125375) TTS (NR_125375) 8254 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr9-3628 chr9 91150912 91151122 + 13.8 0.000 intron (NR_135306, intron 2 of 2) (ACAA)n|Simple_repeat|Simple_repeat 31955 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr1-5874 chr1 3079365 3079575 + 13.8 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 10267 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr22-1270 chr22 30717429 30717639 + 13.8 0.000 intron (NM_030758, intron 1 of 13) intron (NM_030758, intron 1 of 13) -14023 NR_036171 100422912 NR_036171 ENSG00000264661 MIR3200 mir-3200 microRNA 3200 ncRNA chr10-1147 chr10 93161025 93161235 + 13.8 0.000 Intergenic Intergenic 87237 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr20-557 chr20 51661015 51661225 + 13.8 0.000 intron (NM_006045, intron 13 of 27) intron (NM_006045, intron 13 of 27) -98281 NM_001136021 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr14-945 chr14 36902023 36902233 + 13.8 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) 50263 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr1-2209 chr1 93567523 93567733 + 13.8 0.000 intron (NM_001308251, intron 6 of 7) intron (NM_001308251, intron 6 of 7) 17534 NM_001308251 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr4-1316 chr4 139300684 139300894 + 13.8 0.000 promoter-TSS (NM_057175) promoter-TSS (NM_057175) 421 NM_001184991 4717 Hs.84549 NM_002494 ENSG00000109390 NDUFC1 KFYI NADH:ubiquinone oxidoreductase subunit C1 protein-coding chr17-1658 chr17 66655905 66656115 + 13.8 0.000 intron (NM_002737, intron 5 of 16) intron (NM_002737, intron 5 of 16) -131062 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr22-609 chr22 45213025 45213235 + 13.8 0.000 promoter-TSS (NM_015264) promoter-TSS (NM_015264) -664 NM_015264 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr14-1360 chr14 103572067 103572277 + 13.8 0.000 intron (NR_126432, intron 2 of 3) intron (NR_126432, intron 2 of 3) 9212 NM_001302654 84334 Hs.598441 NM_001302652 ENSG00000256053 COA8 APOP|APOP1|APOPT1|C14orf153 cytochrome c oxidase assembly factor 8 protein-coding chr2-1178 chr2 25228795 25229005 + 13.8 0.000 non-coding (NR_135490, exon 24 of 24) non-coding (NR_135490, exon 24 of 24) 23231 NM_001320893 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr3-3537 chr3 45582545 45582755 + 13.8 0.000 Intergenic L1MC4a|LINE|L1 -12101 NM_014240 8994 Hs.193370 NM_014240 ENSG00000144791 LIMD1 - LIM domains containing 1 protein-coding chr3-1288 chr3 100915993 100916203 + 13.8 0.000 intron (NM_001349332, intron 2 of 35) intron (NM_001349332, intron 2 of 35) 77392 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr6-837 chr6 148407399 148407609 + 13.8 0.000 intron (NM_001346506, intron 2 of 20) L1MB3|LINE|L1 64666 NM_001346506 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr1-5259 chr1 204008057 204008267 + 13.8 0.000 Intergenic Tigger9b|DNA|TcMar-Tigger 33102 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr8-390 chr8 71361747 71361957 + 13.8 0.000 5' UTR (NM_000503, exon 1 of 18) 5' UTR (NM_000503, exon 1 of 18) 217 NM_001288575 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr16-1419 chr16 8878711 8878921 + 13.8 0.000 Intergenic MIRc|SINE|MIR -9804 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr16-2127 chr16 4670788 4670998 + 13.8 0.000 promoter-TSS (NR_106827) promoter-TSS (NR_106827) -425 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr3-1388 chr3 72155563 72155773 + 13.8 0.000 intron (NR_038221, intron 1 of 2) intron (NR_038221, intron 1 of 2) 4411 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr20-764 chr20 36572525 36572735 + 13.8 0.000 promoter-TSS (NM_001199514) promoter-TSS (NM_001199514) 645 NR_109939 101926987 Hs.647444 NR_109939 ENSG00000232907 DLGAP4-AS1 CCAT7 DLGAP4 antisense RNA 1 ncRNA chr4-2492 chr4 13598056 13598266 + 13.8 0.000 intron (NM_148894, intron 10 of 25) intron (NM_148894, intron 10 of 25) 29564 NM_148894 259282 Hs.744935 NM_148894 ENSG00000038219 BOD1L1 BOD1L|FAM44A biorientation of chromosomes in cell division 1 like 1 protein-coding chr12-1689 chr12 113299754 113299964 + 13.8 0.000 exon (NM_024959, exon 16 of 16) exon (NM_024959, exon 16 of 16) 8336 NR_106820 102465457 NR_106820 ENSG00000274822 MIR6762 hsa-mir-6762 microRNA 6762 ncRNA chr6-1803 chr6 131733370 131733580 + 13.8 0.000 intron (NR_133007, intron 20 of 23) intron (NR_133007, intron 20 of 23) -22458 NM_001145659 643854 Hs.632613 NM_001145659 ENSG00000236761 CTAGE9 - CTAGE family member 9 protein-coding chr2-3091 chr2 120597107 120597317 + 13.8 0.000 Intergenic Intergenic -130863 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr3-2550 chr3 53163447 53163657 + 13.8 0.000 intron (NM_001316327, intron 1 of 18) MIRb|SINE|MIR 2045 NM_001316327 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr14-1343 chr14 85471765 85471975 + 13.8 0.000 Intergenic Intergenic -58155 NR_144386 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr16-1270 chr16 58392730 58392940 + 13.8 0.000 intron (NM_001126130, intron 1 of 1) CpG 364 NM_001126129 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr1-3650 chr1 78340144 78340354 + 13.8 0.000 intron (NR_027310, intron 3 of 5) intron (NR_027310, intron 3 of 5) 110650 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr11-2311 chr11 65279922 65280132 + 13.8 0.000 intron (NM_002689, intron 7 of 17) intron (NM_002689, intron 7 of 17) 18065 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr1-3761 chr1 2009253 2009463 + 13.8 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -5572 NM_001304360 85452 Hs.232092 NM_001003808 ENSG00000142609 CFAP74 C1orf222|KIAA1751 cilia and flagella associated protein 74 protein-coding chr18-1110 chr18 73061278 73061488 + 13.8 0.000 Intergenic Intergenic 192343 NR_134647 100505797 Hs.145111 NR_134647 ENSG00000263958 LOC100505797 - myosin heavy chain IB-like ncRNA chr4-1200 chr4 82745466 82745676 + 13.8 0.000 intron (NM_001037582, intron 1 of 4) L1PA11|LINE|L1 7859 NR_030301 693160 NR_030301 ENSG00000207746 MIR575 MIRN575|hsa-mir-575 microRNA 575 ncRNA chr1-3630 chr1 48495199 48495409 + 13.8 0.000 Intergenic Intergenic -23096 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr4-1664 chr4 130689305 130689515 + 13.8 0.000 Intergenic L1MC1|LINE|L1 313049 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr2-4111 chr2 150920134 150920344 + 13.8 0.000 Intergenic Intergenic 291342 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr7-1092 chr7 295870 296080 + 13.8 0.000 Intergenic Intergenic -83450 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr5-1494 chr5 122093515 122093725 + 13.8 0.000 Intergenic Intergenic -15361 NM_002317 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr5-1275 chr5 134587262 134587472 + 13.8 0.000 Intergenic Intergenic 45461 NM_001033503 51128 Hs.432984 NM_016103 ENSG00000152700 SAR1B ANDD|CMRD|GTBPB|SARA2 secretion associated Ras related GTPase 1B protein-coding chr8-2831 chr8 129591455 129591665 + 13.8 0.000 intron (NR_130917, intron 1 of 3) MIRb|SINE|MIR -16542 NR_130918 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr11-3091 chr11 26621264 26621474 + 13.8 0.000 intron (NM_031418, intron 17 of 26) L2a|LINE|L2 -49106 NM_001135092 143662 Hs.407152 NM_145650 ENSG00000169550 MUC15 MUC-15|PAS3|PASIII mucin 15, cell surface associated protein-coding chr2-3133 chr2 174051875 174052085 + 13.8 0.000 Intergenic Intergenic 26700 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr17-1377 chr17 81450261 81450471 + 13.8 0.000 TTS (NR_036152) TTS (NR_036152) 822 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr1-5824 chr1 223301355 223301565 + 13.8 0.000 intron (NM_017982, intron 2 of 8) intron (NM_017982, intron 2 of 8) 62716 NM_001037175 55061 Hs.497841 NM_017982 ENSG00000143502 SUSD4 PRO222 sushi domain containing 4 protein-coding chr7-1393 chr7 1603946 1604156 + 13.8 0.000 Intergenic CpG -10419 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr20-1142 chr20 44670956 44671166 + 13.8 0.000 intron (NR_034104, intron 1 of 4) HERVH-int|LTR|ERV1 678 NR_034104 79015 Hs.671450 NM_024049 ENSG00000283440 LINC01260 - long intergenic non-protein coding RNA 1260 ncRNA chr6-1028 chr6 131949788 131949998 + 13.8 0.000 intron (NM_001901, intron 4 of 4) intron (NM_001901, intron 4 of 4) 1479 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr4-716 chr4 122826736 122826946 + 13.8 0.000 promoter-TSS (NM_001361665) promoter-TSS (NM_001361665) 10 NM_001361665 2247 Hs.284244 NM_002006 ENSG00000138685 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 protein-coding chr9-2532 chr9 124577930 124578140 + 13.8 0.000 intron (NM_033334, intron 2 of 9) L2c|LINE|L2 -70636 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr6-1511 chr6 161417914 161418124 + 13.8 0.000 intron (NM_004562, intron 9 of 11) intron (NM_004562, intron 9 of 11) -52958 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr6-2538 chr6 16583104 16583314 + 13.8 0.000 intron (NM_000332, intron 5 of 8) intron (NM_000332, intron 5 of 8) 176975 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr12-1171 chr12 43847511 43847721 + 13.8 0.000 intron (NM_001286213, intron 2 of 6) intron (NM_001286213, intron 2 of 6) 11535 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr8-475 chr8 55948436 55948646 + 13.8 0.000 intron (NM_002350, intron 4 of 12) intron (NM_002350, intron 4 of 12) -45686 NR_145767 109617001 NR_145767 ENSG00000199405 SNORA1B - small nucleolar RNA, H/ACA box 1B snoRNA chr2-3253 chr2 238684476 238684686 + 13.8 0.000 Intergenic Intergenic -129082 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr17-2064 chr17 64649209 64649419 + 13.8 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 12993 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr1-5730 chr1 88195356 88195566 + 13.8 0.000 Intergenic Intergenic -488683 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr2-5200 chr2 39214860 39215070 + 13.8 0.000 intron (NM_001009565, intron 2 of 7) LTR86B1|LTR|ERVL 14623 NM_001346911 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr8-2266 chr8 86160041 86160251 + 13.8 0.000 Intergenic Intergenic 61236 NM_152565 245972 Hs.436360 NM_152565 ENSG00000147614 ATP6V0D2 ATP6D2|VMA6 ATPase H+ transporting V0 subunit d2 protein-coding chr5-1417 chr5 174750811 174751021 + 13.8 0.000 promoter-TSS (NR_039777) promoter-TSS (NR_039777) -818 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr19-2815 chr19 49430983 49431193 + 13.8 0.000 exon (NM_020309, exon 11 of 12) exon (NM_020309, exon 11 of 12) 4657 NM_001195256 100507003 Hs.553831 NM_001195256 ENSG00000261949 GFY Goofy golgi associated olfactory signaling regulator protein-coding chr14-1540 chr14 61562831 61563041 + 13.8 0.000 non-coding (NR_110416, exon 4 of 5) non-coding (NR_110416, exon 4 of 5) 7258 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr11-3309 chr11 102946401 102946611 + 13.8 0.000 intron (NM_002427, intron 8 of 9) L2c|LINE|L2 9226 NM_002427 4322 Hs.2936 NM_002427 ENSG00000137745 MMP13 CLG3|MANDP1|MDST|MMP-13 matrix metallopeptidase 13 protein-coding chr16-1872 chr16 82071059 82071269 + 13.8 0.000 intron (NM_002153, intron 3 of 4) intron (NM_002153, intron 3 of 4) 35911 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chr10-2432 chr10 1134477 1134687 + 13.8 0.000 Intergenic Intergenic -25186 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr11-1947 chr11 118834554 118834764 + 13.8 0.000 Intergenic Intergenic -43495 NM_004397 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr13-629 chr13 52411734 52411944 + 13.8 0.000 TTS (NM_001282169) TTS (NM_001282169) -5667 NM_018676 55901 Hs.325667 NM_018676 ENSG00000136114 THSD1 TMTSP|UNQ3010 thrombospondin type 1 domain containing 1 protein-coding chr15-1130 chr15 42716467 42716677 + 13.8 0.000 intron (NM_020759, intron 26 of 32) intron (NM_020759, intron 26 of 32) 20556 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr1-2551 chr1 11926346 11926556 + 13.8 0.000 promoter-TSS (NM_138346) promoter-TSS (NM_138346) -24 NM_138346 90231 Hs.520094 NM_138346 ENSG00000116685 KIAA2013 - KIAA2013 protein-coding chr19-3124 chr19 16543251 16543461 + 13.8 0.000 promoter-TSS (NM_006387) promoter-TSS (NM_006387) -919 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr5-2050 chr5 113136956 113137166 + 13.8 0.000 intron (NM_001085377, intron 5 of 18) THE1D|LTR|ERVL-MaLR 157877 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr16-3800 chr16 46607623 46607833 + 13.8 0.000 intron (NM_001324318, intron 5 of 12) intron (NM_001324318, intron 5 of 12) 13651 NR_136738 79801 Hs.123253 NM_024745 ENSG00000171241 SHCBP1 PAL SHC binding and spindle associated 1 protein-coding chr3-1724 chr3 103252243 103252453 + 13.8 0.000 Intergenic LTR33C|LTR|ERVL 271768 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr6-1581 chr6 21634624 21634834 + 13.8 0.000 Intergenic Intergenic -31684 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr11-2480 chr11 64829392 64829602 + 13.8 0.000 exon (NM_017525, exon 30 of 37) exon (NM_017525, exon 30 of 37) 15156 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr17-4064 chr17 78591276 78591486 + 13.8 0.000 Intergenic Intergenic -13987 NM_173628 8632 Hs.375975 NM_003727 ENSG00000187775 DNAH17 DNAHL1|DNEL2 dynein axonemal heavy chain 17 protein-coding chr5-1888 chr5 150517517 150517727 + 13.8 0.000 intron (NM_001543, intron 1 of 14) L1MC1|LINE|L1 9491 NM_001543 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr10-2834 chr10 31582548 31582758 + 13.8 0.000 Intergenic Intergenic -182898 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr10-1597 chr10 33819335 33819545 + 13.8 0.000 Intergenic Intergenic -46760 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr17-2662 chr17 29102932 29103142 + 13.8 0.000 intron (NM_001346767, intron 21 of 39) intron (NM_001346767, intron 21 of 39) -27428 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr17-2267 chr17 19327121 19327331 + 13.8 0.000 intron (NM_014964, intron 7 of 10) intron (NM_014964, intron 7 of 10) 17348 NR_031591 100302256 NR_031591 ENSG00000221540 MIR1180 MIRN1180|hsa-mir-1180|mir-1180 microRNA 1180 ncRNA chr2-10317 chr2 147628962 147629172 + 13.8 0.000 Intergenic Intergenic -215450 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chrX-472 chrX 16979212 16979422 + 13.8 0.000 intron (NM_001080975, intron 1 of 17) intron (NM_001080975, intron 1 of 17) 32659 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chrX-825 chrX 101743801 101744011 + 13.8 0.000 Intergenic Intergenic -84056 NM_177949 9823 Hs.48924 NM_014782 ENSG00000184867 ARMCX2 ALEX2|GASP9 armadillo repeat containing X-linked 2 protein-coding chr9-2096 chr9 86615104 86615314 + 13.8 0.000 Intergenic Intergenic -260799 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr1-2648 chr1 161117938 161118148 + 13.8 0.000 promoter-TSS (NM_001185093) promoter-TSS (NM_001185093) -6 NM_012394 5202 Hs.492516 NM_012394 ENSG00000143256 PFDN2 PFD2 prefoldin subunit 2 protein-coding chr20-1388 chr20 1273203 1273413 + 13.8 0.000 intron (NM_014723, intron 2 of 5) intron (NM_014723, intron 2 of 5) 7014 NM_014723 9751 Hs.323833 NM_014723 ENSG00000101298 SNPH - syntaphilin protein-coding chr21-283 chr21 33286909 33287119 + 13.8 0.000 intron (NM_000628, intron 5 of 6) MER67B|LTR|ERV1 20647 NM_000628 3588 Hs.654593 NM_000628 ENSG00000243646 IL10RB CDW210B|CRF2-4|CRFB4|D21S58|D21S66|IL-10R2 interleukin 10 receptor subunit beta protein-coding chr2-1324 chr2 65436571 65436781 + 13.8 0.000 Intergenic CpG -4077 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr7-1790 chr7 81173722 81173932 + 13.8 0.000 Intergenic Intergenic -251438 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr10-1876 chr10 100267636 100267846 + 13.8 0.000 promoter-TSS (NM_001303405) promoter-TSS (NM_001303405) -103 NM_001303405 55280 Hs.215502 NM_018294 ENSG00000095485 CWF19L1 C19L1|SCAR17|hDrn1 CWF19 like cell cycle control factor 1 protein-coding chr10-1849 chr10 66838140 66838350 + 13.8 0.000 intron (NM_001127384, intron 7 of 17) intron (NM_001127384, intron 7 of 17) -87791 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr10-2517 chr10 46304042 46304252 + 13.8 0.000 intron (NM_001278688, intron 10 of 16) intron (NM_001278688, intron 10 of 16) 17150 NM_001354208 195977 Hs.538515 NM_001278688 ENSG00000274209 ANTXRL - ANTXR like protein-coding chr17-4072 chr17 79020315 79020525 + 13.8 0.000 intron (NR_040019, intron 1 of 2) intron (NR_040019, intron 1 of 2) -2514 NM_153372 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and TNF related 1 protein-coding chr6-1279 chr6 107784796 107785006 + 13.8 0.000 intron (NM_198081, intron 1 of 7) intron (NM_198081, intron 1 of 7) 39412 NM_001286408 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr14-990 chr14 92426325 92426535 + 13.8 0.000 intron (NM_153647, intron 3 of 17) intron (NM_153647, intron 3 of 17) -87351 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr3-3156 chr3 170622823 170623033 + 13.8 0.000 intron (NR_135556, intron 2 of 5) intron (NR_135556, intron 2 of 5) -36853 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr2-2867 chr2 171598915 171599125 + 13.8 0.000 Intergenic L1MC5|LINE|L1 76546 NM_001127383 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr20-577 chr20 38374511 38374721 + 13.8 0.000 intron (NM_004139, intron 14 of 14) AluSg|SINE|Alu 28134 NM_004139 3929 Hs.154078 NM_004139 ENSG00000129988 LBP BPIFD2 lipopolysaccharide binding protein protein-coding chr2-5832 chr2 235433771 235433981 + 13.8 0.000 Intergenic Intergenic -60167 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr10-1654 chr10 109374275 109374485 + 13.8 0.000 Intergenic Intergenic 548866 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr22-1431 chr22 44940657 44940867 + 13.8 0.000 intron (NM_001284296, intron 2 of 13) intron (NM_001284296, intron 2 of 13) 62857 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr17-2429 chr17 801929 802139 + 13.8 0.000 intron (NM_001205319, intron 7 of 7) Tigger19b|DNA|TcMar-Tigger 19681 NM_001317947 55178 Hs.182729 NM_018146 ENSG00000171861 MRM3 RMTL1|RNMTL1 mitochondrial rRNA methyltransferase 3 protein-coding chr9-3694 chr9 105205914 105206124 + 13.8 0.000 Intergenic Intergenic -38586 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr9-1379 chr9 72348074 72348284 + 13.8 0.000 Intergenic MSTA|LTR|ERVL-MaLR 16377 NM_001278245 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr17-4066 chr17 78739448 78739658 + 13.8 0.000 intron (NM_004762, intron 1 of 12) L2a|LINE|L2 -2651 NM_001365040 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr5-1137 chr5 120464788 120464998 + 13.8 0.000 promoter-TSS (NM_001308087) promoter-TSS (NM_001308087) 593 NM_001300783 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr11-3604 chr11 66967743 66967953 + 13.8 0.000 Intergenic Intergenic -7456 NM_001136485 254439 Hs.232604 NM_001136485 ENSG00000173237 C11orf86 - chromosome 11 open reading frame 86 protein-coding chr3-2031 chr3 101940546 101940756 + 13.8 0.000 promoter-TSS (NR_026934) promoter-TSS (NR_026934) -208 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chrX-346 chrX 22300314 22300524 + 13.8 0.000 intron (NR_073010, intron 5 of 11) intron (NR_073010, intron 5 of 11) 27506 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr3-2249 chr3 48708629 48708839 + 13.8 0.000 intron (NM_016291, intron 1 of 5) intron (NM_016291, intron 1 of 5) 8487 NM_001005911 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr1-6066 chr1 93805182 93805392 + 13.8 0.000 intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) -29904 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr8-2714 chr8 98852653 98852863 + 13.8 0.000 intron (NM_001256312, intron 3 of 12) intron (NM_001256312, intron 3 of 12) -27070 NM_006281 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr20-2359 chr20 15917481 15917691 + 13.8 0.000 intron (NR_130924, intron 1 of 1) intron (NR_130924, intron 1 of 1) 5728 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr11-2098 chr11 111777529 111777739 + 13.8 0.000 Intergenic Intergenic -11245 NM_001177563 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr18-452 chr18 63979398 63979608 + 13.8 0.000 intron (NM_198833, intron 2 of 6) MER20|DNA|hAT-Charlie 9422 NM_001031848 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr5-1489 chr5 111742679 111742889 + 13.8 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) 13467 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr12-2799 chr12 102067782 102067992 + 13.8 0.000 Intergenic Intergenic -5763 NM_001301107 51019 Hs.405692 NM_016053 ENSG00000120860 WASHC3 CCDC53|CGI-116 WASH complex subunit 3 protein-coding chr17-4252 chr17 50776081 50776291 + 13.8 0.000 Intergenic Intergenic 7536 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr1-3306 chr1 3677045 3677255 + 13.8 0.000 intron (NM_001204185, intron 1 of 12) intron (NM_001204185, intron 1 of 12) -13522 NM_001204190 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr1-4410 chr1 202143461 202143671 + 13.8 0.000 intron (NM_138795, intron 1 of 6) intron (NM_138795, intron 1 of 6) 1171 NM_138795 127829 Hs.497399 NM_138795 ENSG00000143862 ARL8A ARL10B|GIE2 ADP ribosylation factor like GTPase 8A protein-coding chr2-2563 chr2 222169501 222169711 + 13.8 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -128541 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr19-1272 chr19 17556306 17556516 + 13.8 0.000 intron (NM_024656, intron 1 of 11) intron (NM_024656, intron 1 of 11) 762 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr22-435 chr22 20243683 20243893 + 13.8 0.000 intron (NM_023004, intron 1 of 1) intron (NM_023004, intron 1 of 1) 5423 NR_031618 100302118 NR_031618 ENSG00000221039 MIR1286 MIRN1286|hsa-mir-1286|mir-1286 microRNA 1286 ncRNA chr13-1174 chr13 39656266 39656476 + 13.8 0.000 intron (NM_001145079, intron 1 of 18) intron (NM_001145079, intron 1 of 18) 709 NM_001145079 57511 Hs.507805 NM_020751 ENSG00000133103 COG6 CDG2L|COD2|SHNS component of oligomeric golgi complex 6 protein-coding chr6-955 chr6 10413964 10414174 + 13.8 0.000 intron (NR_033910, intron 1 of 2) CpG 1005 NM_003220 7020 Hs.519880 NM_003220 ENSG00000137203 TFAP2A AP-2|AP-2alpha|AP2TF|BOFS|TFAP2 transcription factor AP-2 alpha protein-coding chr19-1171 chr19 5893873 5894083 + 13.8 0.000 TTS (NM_175614) TTS (NM_175614) 9812 NM_175614 126328 Hs.406062 NM_175614 ENSG00000174886 NDUFA11 B14.7|CI-B14.7|MC1DN14 NADH:ubiquinone oxidoreductase subunit A11 protein-coding chr8-3286 chr8 22555088 22555298 + 13.8 0.000 intron (NM_005775, intron 3 of 20) intron (NM_005775, intron 3 of 20) 3266 NM_005775 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr7-2075 chr7 934525 934735 + 13.8 0.000 intron (NM_006869, intron 2 of 10) intron (NM_006869, intron 2 of 10) -7414 NM_001284310 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr7-1238 chr7 139619280 139619490 + 13.8 0.000 intron (NM_022740, intron 7 of 14) intron (NM_022740, intron 7 of 14) 95700 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr1-6199 chr1 206047182 206047392 + 13.8 0.000 Intergenic Intergenic -5886 NM_001007544 440712 Hs.662248 NM_001007544 ENSG00000263961 RHEX C1orf186 regulator of hemoglobinization and erythroid cell expansion protein-coding chr10-1433 chr10 29746380 29746590 + 13.8 0.000 Intergenic Intergenic -9549 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr6-2771 chr6 131755108 131755318 + 13.8 0.000 Intergenic Intergenic -36959 NR_039610 100616455 NR_039610 ENSG00000266807 MIR548H5 - microRNA 548h-5 ncRNA chr2-4914 chr2 151085211 151085421 + 13.8 0.000 Intergenic Intergenic 176547 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr3-1198 chr3 24829953 24830163 + 13.8 0.000 intron (NM_001290216, intron 1 of 10) CpG 735 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr6-2057 chr6 108360089 108360299 + 13.8 0.000 intron (NR_136553, intron 2 of 8) intron (NR_136553, intron 2 of 8) 65140 NR_136553 246269 Hs.259666 NM_145315 ENSG00000135537 AFG1L AFG1|LACE1|c222389 AFG1 like ATPase protein-coding chr1-5044 chr1 88175869 88176079 + 13.8 0.000 Intergenic Intergenic -508170 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr7-1618 chr7 5704544 5704754 + 13.8 0.000 intron (NM_207111, intron 13 of 16) intron (NM_207111, intron 13 of 16) 7261 NR_106934 102466203 NR_106934 ENSG00000283419 MIR6874 hsa-mir-6874 microRNA 6874 ncRNA chr3-3997 chr3 57949934 57950144 + 13.8 0.000 Intergenic Intergenic -58383 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr12-545 chr12 107749308 107749518 + 13.8 0.000 intron (NM_012406, intron 5 of 11) FLAM_C|SINE|Alu 11724 NM_012406 11108 Hs.506655 NM_012406 ENSG00000110851 PRDM4 PFM1 PR/SET domain 4 protein-coding chr8-710 chr8 140360006 140360216 + 13.8 0.000 exon (NM_031466, exon 9 of 23) exon (NM_031466, exon 9 of 23) 97633 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr21-654 chr21 35697372 35697582 + 13.8 0.000 Intergenic Intergenic -23238 NR_030414 768219 NR_030414 ENSG00000211590 MIR802 MIRN802|hsa-mir-802 microRNA 802 ncRNA chr17-2129 chr17 21390732 21390942 + 13.8 0.000 intron (NM_021012, intron 1 of 2) L1MB5|LINE|L1 14480 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr1-1620 chr1 119873769 119873979 + 13.8 0.000 Intergenic Intergenic 22641 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr8-1415 chr8 58991881 58992091 + 13.8 0.000 intron (NM_014729, intron 1 of 8) intron (NM_014729, intron 1 of 8) 127161 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr17-3510 chr17 58465462 58465672 + 13.8 0.000 intron (NM_001080439, intron 3 of 5) MamRep605|LTR?|LTR? 22841 NM_001080439 124535 Hs.380061 NM_001080439 ENSG00000176160 HSF5 HSF 5|HSTF 5 heat shock transcription factor 5 protein-coding chr1-3392 chr1 208269831 208270041 + 13.8 0.000 Intergenic Intergenic -25552 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr8-2105 chr8 141152430 141152640 + 13.8 0.000 intron (NM_001362798, intron 7 of 21) L1MB7|LINE|L1 23946 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr19-2161 chr19 10533780 10533990 + 13.8 0.000 Intergenic Intergenic -10019 NR_104025 84971 Hs.512799 NM_032885 ENSG00000130734 ATG4D APG4-D|APG4D|AUTL4 autophagy related 4D cysteine peptidase protein-coding chr6-1176 chr6 113414567 113414777 + 13.8 0.000 Intergenic L2|LINE|L2 18775 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr3-2364 chr3 163071768 163071978 + 13.8 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 231428 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr9-3201 chr9 132008330 132008540 + 13.8 0.000 intron (NM_001253881, intron 3 of 6) intron (NM_001253881, intron 3 of 6) 71432 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr1-3933 chr1 92950558 92950768 + 13.8 0.000 intron (NM_001006605, intron 1 of 4) AluJr|SINE|Alu 10799 NM_001006605 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr8-1021 chr8 144534223 144534433 + 13.8 0.000 intron (NM_001308208, intron 6 of 10) intron (NM_001308208, intron 6 of 10) -5217 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr12-2278 chr12 109311839 109312049 + 13.8 0.000 Intergenic Intergenic -2660 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr1-3272 chr1 221741365 221741575 + 13.8 0.000 intron (NM_007207, intron 1 of 3) intron (NM_007207, intron 1 of 3) 619 NM_007207 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr1-2128 chr1 223135140 223135350 + 13.8 0.000 intron (NM_003268, intron 3 of 5) intron (NM_003268, intron 3 of 5) 8003 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr10-1836 chr10 29703332 29703542 + 13.8 0.000 intron (NM_001323599, intron 1 of 38) intron (NM_001323599, intron 1 of 38) 32364 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr12-734 chr12 110358396 110358606 + 13.8 0.000 Intergenic L1ME3B|LINE|L1 45229 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr6-3284 chr6 157033738 157033948 + 13.8 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -2584 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr12-2244 chr12 67720358 67720568 + 13.8 0.000 intron (NR_110063, intron 2 of 4) intron (NR_110063, intron 2 of 4) 9012 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr10-1430 chr10 21926969 21927179 + 13.8 0.000 intron (NM_022365, intron 3 of 11) intron (NM_022365, intron 3 of 11) 76656 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr1-1982 chr1 235327336 235327546 + 13.8 0.000 promoter-TSS (NM_001206794) promoter-TSS (NM_001206794) 46 NM_001206794 51742 Hs.575782 NM_016374 ENSG00000054267 ARID4B BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180 AT-rich interaction domain 4B protein-coding chr5-2099 chr5 30612121 30612331 + 13.8 0.000 Intergenic MER34D|LTR|ERV1 -581460 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr10-2682 chr10 99845961 99846171 + 13.8 0.000 intron (NM_000392, intron 29 of 31) intron (NM_000392, intron 29 of 31) 63426 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr19-746 chr19 45398348 45398558 + 13.8 0.000 intron (NM_001142502, intron 1 of 12) intron (NM_001142502, intron 1 of 12) 6616 NM_006663 10848 Hs.466937 NM_006663 ENSG00000104881 PPP1R13L IASPP|NKIP1|RAI|RAI4 protein phosphatase 1 regulatory subunit 13 like protein-coding chr1-6931 chr1 153896618 153896828 + 13.8 0.000 intron (NM_020699, intron 1 of 10) AluSp|SINE|Alu 26249 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr15-705 chr15 93037709 93037919 + 13.8 0.000 3' UTR (NM_001166288, exon 4 of 4) 3' UTR (NM_001166288, exon 4 of 4) 35342 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr2-1813 chr2 63849525 63849735 + 13.8 0.000 intron (NM_006759, intron 1 of 9) intron (NM_006759, intron 1 of 9) 7750 NM_006759 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr11-2557 chr11 102430295 102430505 + 13.8 0.000 intron (NM_052932, intron 2 of 4) L2b|LINE|L2 22365 NM_052932 114908 Hs.503709 NM_052932 ENSG00000152558 TMEM123 KCT3|PORIMIN|PORMIN transmembrane protein 123 protein-coding chr2-2021 chr2 98455764 98455974 + 13.8 0.000 intron (NM_001351428, intron 1 of 24) intron (NM_001351428, intron 1 of 24) 9859 NM_001351428 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr1-3473 chr1 54353949 54354159 + 13.8 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 52340 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr8-1220 chr8 106891806 106892016 + 13.8 0.000 Intergenic Intergenic -121667 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr3-1965 chr3 78097065 78097275 + 13.8 0.000 Intergenic MER39|LTR|ERV1 -48207 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr5-2177 chr5 131615221 131615431 + 13.8 0.000 intron (NM_016340, intron 1 of 27) intron (NM_016340, intron 1 of 27) 19903 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr16-1646 chr16 28181458 28181668 + 13.8 0.000 intron (NM_015171, intron 1 of 23) AluJr|SINE|Alu 30402 NM_001270940 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr10-2560 chr10 69335296 69335506 + 13.8 0.000 intron (NM_001322367, intron 1 of 16) intron (NM_001322367, intron 1 of 16) 16554 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr1-2475 chr1 89739364 89739574 + 13.8 0.000 Intergenic Intergenic -81563 NM_001134479 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 VRAC subunit D protein-coding chr10-1857 chr10 72693541 72693751 + 13.8 0.000 intron (NM_001270680, intron 1 of 7) intron (NM_001270680, intron 1 of 7) 1027 NM_001270680 90550 Hs.591366 NM_138357 ENSG00000156026 MCU C10orf42|CCDC109A|HsMCU mitochondrial calcium uniporter protein-coding chr15-1156 chr15 70234568 70234778 + 13.8 0.000 Intergenic HAL1ME|LINE|L1 -136756 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr11-1125 chr11 46516311 46516521 + 13.8 0.000 intron (NM_001367468, intron 7 of 17) intron (NM_001367468, intron 7 of 17) -64527 NR_036117 100422827 NR_036117 ENSG00000265014 MIR3160-1 mir-3160-1 microRNA 3160-1 ncRNA chr7-3039 chr7 104138204 104138414 + 13.8 0.000 intron (NM_002553, intron 12 of 13) intron (NM_002553, intron 12 of 13) 69704 NM_002553 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chr22-1224 chr22 40138987 40139197 + 13.8 0.000 intron (NM_001024843, intron 3 of 23) L1MB7|LINE|L1 -38833 NM_015088 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr2-4479 chr2 240834764 240834974 + 13.8 0.000 Intergenic Intergenic -14561 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr15-1245 chr15 75989211 75989421 + 13.8 0.000 intron (NM_138573, intron 3 of 5) L1MEc|LINE|L1 23108 NM_138573 145957 Hs.732438 NM_138573 ENSG00000169752 NRG4 HRG4 neuregulin 4 protein-coding chr3-2413 chr3 194333766 194333976 + 13.8 0.000 Intergenic CpG 17457 NM_001291988 1370 Hs.528368 NM_001309 ENSG00000178772 CPN2 ACBP carboxypeptidase N subunit 2 protein-coding chr2-2270 chr2 19933496 19933706 + 13.8 0.000 intron (NM_001006657, intron 22 of 27) intron (NM_001006657, intron 22 of 27) -31618 NM_001008237 130502 Hs.591547 NM_001008237 ENSG00000183891 TTC32 - tetratricopeptide repeat domain 32 protein-coding chr13-873 chr13 29508276 29508486 + 13.8 0.000 Intergenic Intergenic -20631 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr10-5939 chr10 121583259 121583469 + 13.8 0.000 intron (NM_001320658, intron 2 of 17) intron (NM_001320658, intron 2 of 17) 10603 NM_001144914 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr6-1221 chr6 108651837 108652047 + 13.8 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 91025 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chrX-508 chrX 97898884 97899094 + 13.8 0.000 Intergenic Intergenic -334454 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr12-3569 chr12 26528466 26528676 + 13.8 0.000 intron (NM_002223, intron 37 of 56) intron (NM_002223, intron 37 of 56) 304623 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr17-1010 chr17 4987340 4987550 + 13.8 0.000 promoter-TSS (NM_001171167) promoter-TSS (NM_001171167) 16 NM_001171168 23125 Hs.632242 NM_015099 ENSG00000108509 CAMTA2 - calmodulin binding transcription activator 2 protein-coding chr7-1890 chr7 134742882 134743092 + 13.8 0.000 Intergenic Intergenic -36647 NM_033157 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr5-869 chr5 171809054 171809264 + 13.8 0.000 Intergenic Intergenic 23287 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr6-3720 chr6 2157093 2157303 + 13.8 0.000 intron (NM_001500, intron 1 of 10) MER5A1|DNA|hAT-Charlie 18793 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr2-3917 chr2 51134972 51135182 + 13.8 0.000 intron (NR_135237, intron 2 of 10) THE1B-int|LTR|ERVL-MaLR 102476 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr2-2466 chr2 105369870 105370080 + 13.8 0.000 intron (NM_001318898, intron 3 of 5) intron (NM_001318898, intron 3 of 5) 29076 NM_001450 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr3-3022 chr3 111517939 111518149 + 13.8 0.000 Intergenic Intergenic -24153 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr4-2607 chr4 135277815 135278025 + 13.8 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -154361 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr19-1454 chr19 28940810 28941020 + 13.8 0.000 Intergenic Intergenic -24216 NR_027318 148145 Hs.112651 NR_027318 ENSG00000267339 LINC00906 - long intergenic non-protein coding RNA 906 ncRNA chr1-6434 chr1 16088954 16089164 + 13.8 0.000 Intergenic Intergenic -15408 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr2-1772 chr2 199851144 199851354 + 13.8 0.000 promoter-TSS (NM_001350853) promoter-TSS (NM_001350853) -76 NM_001363886 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding chr18-578 chr18 79413173 79413383 + 13.8 0.000 intron (NM_001278672, intron 2 of 8) MLT1B|LTR|ERVL-MaLR 12979 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr12-983 chr12 64039323 64039533 + 13.8 0.000 intron (NM_001346201, intron 4 of 21) intron (NM_001346201, intron 4 of 21) 182868 NM_152440 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr20-1141 chr20 44601773 44601983 + 13.8 0.000 intron (NM_001281444, intron 4 of 5) intron (NM_001281444, intron 4 of 5) 19299 NM_001281445 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr1-6870 chr1 112906315 112906525 + 13.8 0.000 Intergenic MIRc|SINE|MIR -16930 NR_002796 246182 Hs.647691 NR_002796 AKR7A2P1 AFARP1 aldo-keto reductase family 7 member A2 pseudogene 1 pseudo chr1-4322 chr1 42963597 42963807 + 13.8 0.000 intron (NR_033967, intron 1 of 3) intron (NR_033967, intron 1 of 3) 4653 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr10-1791 chr10 86635509 86635719 + 13.8 0.000 Intergenic LTR24B|LTR|ERV1 -18933 NM_033282 94233 Hs.283922 NM_033282 ENSG00000122375 OPN4 MOP opsin 4 protein-coding chr10-759 chr10 93893925 93894135 + 13.8 0.000 promoter-TSS (NR_144335) promoter-TSS (NR_144335) 52 NM_001345993 159371 Hs.632085 NM_153226 ENSG00000176273 SLC35G1 C10orf60|POST|TMEM20 solute carrier family 35 member G1 protein-coding chr9-760 chr9 96383586 96383796 + 13.8 0.000 promoter-TSS (NM_007001) promoter-TSS (NM_007001) 19 NR_104627 11046 Hs.494556 NM_007001 ENSG00000130958 SLC35D2 HFRC1|SQV7L|UGTrel8|hfrc solute carrier family 35 member D2 protein-coding chr21-343 chr21 32389485 32389695 + 13.8 0.000 intron (NM_014825, intron 1 of 38) L2b|LINE|L2 3422 NM_014825 9875 Hs.473611 NM_014825 ENSG00000142207 URB1 C21orf108|NPA1 URB1 ribosome biogenesis homolog protein-coding chr12-1264 chr12 57013151 57013361 + 13.8 0.000 intron (NR_135165, intron 4 of 7) intron (NR_135165, intron 4 of 7) 3273 NM_001178054 6866 Hs.9730 NM_013251 ENSG00000166863 TAC3 HH10|NKB|NKNB|PRO1155|ZNEUROK1 tachykinin 3 protein-coding chr3-2779 chr3 184248888 184249098 + 13.8 0.000 promoter-TSS (NR_024534) promoter-TSS (NR_024534) -22 NR_024534 10195 Hs.478481 NM_005787 ENSG00000214160 ALG3 CDG1D|CDGS4|CDGS6|D16Ertd36e|NOT56L|Not56|not ALG3 alpha-1,3- mannosyltransferase protein-coding chr1-4328 chr1 48471573 48471783 + 13.8 0.000 intron (NM_019073, intron 1 of 12) CpG 526 NM_001286238 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chrX-302 chrX 154398073 154398283 + 13.8 0.000 promoter-TSS (NM_001303626) promoter-TSS (NM_001303626) 113 NM_001303625 6134 Hs.534404 NM_006013 ENSG00000147403 RPL10 AUTSX5|DXS648|DXS648E|L10|MRXS35|NOV|QM ribosomal protein L10 protein-coding chr11-2371 chr11 130873224 130873434 + 13.8 0.000 Intergenic MER58A|DNA|hAT-Charlie -3082 NR_125382 103611081 Hs.430300 NR_125382 ENSG00000255455 LOC103611081 - uncharacterized LOC103611081 ncRNA chr6-1171 chr6 52556074 52556284 + 13.8 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 20881 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr6-429 chr6 44224054 44224264 + 13.8 0.000 intron (NM_001078177, intron 1 of 13) intron (NM_001078177, intron 1 of 13) 564 NM_001078177 2030 Hs.25450 NM_004955 ENSG00000112759 SLC29A1 ENT1 solute carrier family 29 member 1 (Augustine blood group) protein-coding chr10-1228 chr10 63722383 63722593 + 13.8 0.000 Intergenic Intergenic -200598 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr2-1747 chr2 42922965 42923175 + 13.8 0.000 Intergenic L2c|LINE|L2 116473 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chrX-338 chrX 153726330 153726540 + 13.8 0.000 intron (NM_000033, intron 1 of 9) intron (NM_000033, intron 1 of 9) 1579 NM_000033 215 Hs.159546 NM_000033 ENSG00000101986 ABCD1 ABC42|ALD|ALDP|AMN ATP binding cassette subfamily D member 1 protein-coding chr5-1441 chr5 32232514 32232724 + 13.8 0.000 intron (NM_001294344, intron 13 of 13) intron (NM_001294344, intron 13 of 13) -58300 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr14-612 chr14 69767613 69767823 + 13.8 0.000 promoter-TSS (NR_029378) promoter-TSS (NR_029378) -5 NR_029378 100289511 Hs.729250 NR_029378 LOC100289511 - uncharacterized LOC100289511 ncRNA chr11-1836 chr11 69097677 69097887 + 13.8 0.000 Intergenic Intergenic 14606 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr6-1633 chr6 107692489 107692699 + 13.8 0.000 Intergenic Intergenic 39556 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr3-1853 chr3 105503310 105503520 + 13.8 0.000 intron (NM_001243280, intron 1 of 14) intron (NM_001243280, intron 1 of 14) 136506 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr2-1436 chr2 216633104 216633314 + 13.8 0.000 promoter-TSS (NM_000597) promoter-TSS (NM_000597) -211 NM_000597 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr1-6568 chr1 32816696 32816906 + 13.8 0.000 promoter-TSS (NM_001256121) promoter-TSS (NM_001256121) -641 NM_001256121 64766 Hs.440880 NM_022753 ENSG00000116497 S100PBP S100PBPR S100P binding protein protein-coding chr2-1809 chr2 53512461 53512671 + 13.8 0.000 Intergenic Intergenic -255217 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr13-585 chr13 98267104 98267314 + 13.8 0.000 intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 58685 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr2-4431 chr2 159968248 159968458 + 13.8 0.000 intron (NM_001007267, intron 19 of 26) intron (NM_001007267, intron 19 of 26) -63597 NM_001198759 100526664 Hs.153563 NM_001198759 ENSG00000248672 LY75-CD302 CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6 LY75-CD302 readthrough protein-coding chr1-4950 chr1 52552093 52552303 + 13.8 0.000 intron (NM_001009881, intron 1 of 29) intron (NM_001009881, intron 1 of 29) 892 NM_015269 23318 Hs.655407 NM_015269 ENSG00000134744 TUT4 PAPD3|TENT3A|ZCCHC11 terminal uridylyl transferase 4 protein-coding chr15-2176 chr15 81614148 81614358 + 13.8 0.000 Intergenic MIR|SINE|MIR -240040 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr8-2145 chr8 27727210 27727420 + 13.8 0.000 Intergenic Intergenic -25548 NR_037418 100500871 NR_037418 ENSG00000265075 MIR3622B - microRNA 3622b ncRNA chr17-3014 chr17 76136470 76136680 + 13.8 0.000 3' UTR (NM_001454, exon 3 of 3) 3' UTR (NM_001454, exon 3 of 3) -3981 NR_040017 100507218 Hs.654866 NR_040017 ENSG00000267128 RNF157-AS1 - RNF157 antisense RNA 1 ncRNA chrX-348 chrX 40504776 40504986 + 13.8 0.000 Intergenic Intergenic -76089 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chr19-1575 chr19 4104869 4105079 + 13.8 0.000 intron (NM_030662, intron 3 of 10) MER20|DNA|hAT-Charlie 19155 NM_030662 5605 Hs.465627 NM_030662 ENSG00000126934 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding chr17-4865 chr17 64653515 64653725 + 13.8 0.000 intron (NM_022739, intron 1 of 18) AluJb|SINE|Alu 8687 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr12-1988 chr12 127991660 127991870 + 13.8 0.000 Intergenic MER66B|LTR|ERV1 -7874 NR_126452 104472718 Hs.628661 NR_126452 LINC00508 - long intergenic non-protein coding RNA 508 ncRNA chr1-6635 chr1 44032434 44032644 + 13.8 0.000 Intergenic Intergenic -1077 NM_001024845 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr7-1698 chr7 862064 862274 + 13.8 0.000 intron (NM_001367704, intron 16 of 19) intron (NM_001367704, intron 16 of 19) -14385 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 guided entry of tail-anchored proteins factor 4 protein-coding chr8-1402 chr8 48316698 48316908 + 13.8 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -234764 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr2-935 chr2 156436153 156436363 + 13.8 0.000 promoter-TSS (NM_000408) promoter-TSS (NM_000408) -121 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr21-394 chr21 35324952 35325162 + 13.8 0.000 Intergenic Intergenic 255707 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr1-5740 chr1 97913576 97913786 + 13.8 0.000 intron (NM_000110, intron 1 of 22) intron (NM_000110, intron 1 of 22) 7378 NM_001160301 1806 Hs.335034 NM_000110 ENSG00000188641 DPYD DHP|DHPDHASE|DPD dihydropyrimidine dehydrogenase protein-coding chr2-5697 chr2 206856615 206856825 + 13.8 0.000 Intergenic Intergenic -73412 NR_036077 100422993 NR_036077 ENSG00000283469 MIR3130-1 MIR3130-3|mir-3130-1 microRNA 3130-1 ncRNA chr2-3183 chr2 212538399 212538609 + 13.8 0.000 exon (NM_005235, exon 1 of 28) exon (NM_005235, exon 1 of 28) 124 NM_001042599 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr8-1653 chr8 144500698 144500908 + 13.8 0.000 intron (NM_001329444, intron 9 of 11) CpG-27820 -3337 NM_005309 2875 Hs.103502 NM_005309 ENSG00000167701 GPT AAT1|ALT1|GPT1 glutamic--pyruvic transaminase protein-coding chr6-876 chr6 72422188 72422398 + 13.8 0.000 Intergenic LTR52|LTR|ERVL 55547 NM_001168411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr13-1181 chr13 42747619 42747829 + 13.8 0.000 Intergenic Intergenic -33826 NM_182508 144809 Hs.16970 NM_182508 ENSG00000179813 FAM216B C13orf30 family with sequence similarity 216 member B protein-coding chr5-1343 chr5 172235148 172235358 + 13.8 0.000 intron (NM_152277, intron 1 of 2) intron (NM_152277, intron 1 of 2) 41081 NM_001171183 285588 Hs.716824 NM_001171183 ENSG00000214360 EFCAB9 - EF-hand calcium binding domain 9 protein-coding chr22-1278 chr22 35219067 35219277 + 13.8 0.000 intron (NR_126356, intron 1 of 5) MLT1L|LTR|ERVL-MaLR 11884 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA chr7-1631 chr7 24955984 24956194 + 13.8 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) 24089 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr6-1525 chr6 35468858 35469068 + 13.8 0.000 exon (NM_007104, exon 3 of 6) exon (NM_007104, exon 3 of 6) 562 NM_007104 4736 Hs.148340 NM_007104 ENSG00000198755 RPL10A CSA19|Csa-19|L10A|NEDD6 ribosomal protein L10a protein-coding chr5-1193 chr5 69129398 69129608 + 13.8 0.000 exon (NM_022902, exon 16 of 16) exon (NM_022902, exon 16 of 16) -31305 NR_145732 109616958 NR_145732 ENSG00000280894 SNORA50D - small nucleolar RNA, H/ACA box 50D snoRNA chr11-1013 chr11 64844311 64844521 + 13.8 0.000 exon (NM_017525, exon 1 of 37) exon (NM_017525, exon 1 of 37) 237 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr10-1062 chr10 109895493 109895703 + 13.8 0.000 intron (NM_001324131, intron 3 of 20) intron (NM_001324131, intron 3 of 20) 27648 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr11-2329 chr11 69890709 69890919 + 13.8 0.000 Intergenic Intergenic -71398 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr14-2125 chr14 75884261 75884471 + 13.8 0.000 intron (NM_015072, intron 30 of 31) intron (NM_015072, intron 30 of 31) 97629 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr2-1968 chr2 12262878 12263088 + 13.8 0.000 intron (NR_110196, intron 3 of 5) intron (NR_110196, intron 3 of 5) 63853 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr3-1296 chr3 133661755 133661965 + 13.8 0.000 promoter-TSS (NM_007027) promoter-TSS (NM_007027) 81 NM_007027 11073 Hs.593379 NM_007027 ENSG00000163781 TOPBP1 Dpb11|TOP2BP1 DNA topoisomerase II binding protein 1 protein-coding chr8-941 chr8 51898446 51898656 + 13.8 0.000 intron (NM_001363193, intron 1 of 5) intron (NM_001363193, intron 1 of 5) 485 NM_052937 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr14-457 chr14 29927164 29927374 + 13.8 0.000 promoter-TSS (NM_001348390) promoter-TSS (NM_001348390) -173 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr16-1420 chr16 8958374 8958584 + 13.8 0.000 intron (NM_003470, intron 1 of 30) intron (NM_003470, intron 1 of 30) -2099 NM_001321858 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chr1-5345 chr1 231590605 231590815 + 13.8 0.000 TTS (NR_034037) TTS (NR_034037) 21380 NR_034037 100287814 Hs.25555 NR_034037 ENSG00000229228 LINC00582 - long intergenic non-protein coding RNA 582 ncRNA chr2-2955 chr2 25212658 25212868 + 13.8 0.000 Intergenic Intergenic 8450 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr1-2959 chr1 109821376 109821586 + 13.8 0.000 Intergenic Intergenic -57558 NM_001319952 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr2-3211 chr2 219803330 219803540 + 13.8 0.000 Intergenic Arthur1|DNA|hAT-Tip100 101454 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr2-2928 chr2 1854989 1855199 + 13.8 0.000 intron (NM_015025, intron 18 of 24) intron (NM_015025, intron 18 of 24) -110579 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-1591 chr2 99975538 99975748 + 13.8 0.000 intron (NM_001025108, intron 6 of 23) intron (NM_001025108, intron 6 of 23) 129940 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr13-852 chr13 100393946 100394156 + 13.8 0.000 intron (NR_148027, intron 20 of 23) intron (NR_148027, intron 20 of 23) 86964 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr14-1152 chr14 34766546 34766756 + 13.8 0.000 intron (NM_013448, intron 21 of 26) intron (NM_013448, intron 21 of 26) -51828 NR_028131 1073 Hs.180141 NM_021914 ENSG00000165410 CFL2 NEM7 cofilin 2 protein-coding chr1-3616 chr1 36266517 36266727 + 13.8 0.000 intron (NM_001321471, intron 3 of 12) intron (NM_001321471, intron 3 of 12) -39746 NM_001162530 79729 Hs.524496 NM_024676 ENSG00000214193 SH3D21 C1orf113 SH3 domain containing 21 protein-coding chr2-6749 chr2 38185348 38185558 + 13.8 0.000 Intergenic Intergenic 54348 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr11-3377 chr11 126282308 126282518 + 13.8 0.000 promoter-TSS (NM_148910) promoter-TSS (NM_148910) -674 NM_001039661 114609 Hs.537126 NM_052887 ENSG00000150455 TIRAP BACTS1|Mal|MyD88-2|wyatt TIR domain containing adaptor protein protein-coding chr9-3019 chr9 123381237 123381447 + 13.8 0.000 3' UTR (NM_001352964, exon 24 of 24) 3' UTR (NM_001352964, exon 24 of 24) 12563 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr9-2847 chr9 127664767 127664977 + 13.8 0.000 intron (NM_001032221, intron 7 of 18) intron (NM_001032221, intron 7 of 18) 25923 NR_037473 100500872 NR_037473 ENSG00000283874 MIR3911 mir-3911 microRNA 3911 ncRNA chr2-3425 chr2 74278234 74278444 + 13.8 0.000 intron (NM_133478, intron 8 of 30) intron (NM_133478, intron 8 of 30) 36686 NM_021196 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr7-1927 chr7 32474938 32475148 + 13.8 0.000 Intergenic Intergenic 15337 NM_012322 23658 Hs.424908 NM_012322 ENSG00000106355 LSM5 YER146W LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr6-2707 chr6 43200827 43201037 + 13.8 0.000 intron (NM_015089, intron 16 of 40) intron (NM_015089, intron 16 of 40) 18736 NM_015089 23113 Hs.485434 NM_015089 ENSG00000112659 CUL9 H7AP1|PARC cullin 9 protein-coding chr14-625 chr14 105528331 105528541 + 13.8 0.000 intron (NM_001331238, intron 1 of 1) CpG 1331 NM_001331238 80757 Hs.157527 NM_025268 ENSG00000184986 TMEM121 TMEM121A|hole transmembrane protein 121 protein-coding chr8-1303 chr8 97640118 97640328 + 13.8 0.000 Intergenic Intergenic -3961 NM_001363137 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr20-726 chr20 1291473 1291683 + 13.8 0.000 intron (NM_014723, intron 2 of 5) intron (NM_014723, intron 2 of 5) 22095 NM_015685 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2|ST2 syndecan binding protein 2 protein-coding chr20-2558 chr20 36343284 36343494 + 13.8 0.000 intron (NM_001365621, intron 1 of 12) intron (NM_001365621, intron 1 of 12) 37050 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr16-623 chr16 23678676 23678886 + 13.8 0.000 promoter-TSS (NM_005030) promoter-TSS (NM_005030) -108 NM_005030 5347 Hs.592049 NM_005030 ENSG00000166851 PLK1 PLK|STPK13 polo like kinase 1 protein-coding chr10-947 chr10 29266744 29266954 + 13.8 0.000 Intergenic Intergenic -22221 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr4-2121 chr4 66565451 66565661 + 13.8 0.000 Intergenic Intergenic 288732 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr18-1662 chr18 63336609 63336819 + 13.8 0.000 intron (NM_002035, intron 8 of 9) Charlie1a|DNA|hAT-Charlie -17334 NM_000657 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr3-2605 chr3 160956830 160957040 + 13.8 0.000 intron (NM_001317912, intron 2 of 4) intron (NM_001317912, intron 2 of 4) 86337 NR_134243 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr12-1579 chr12 123127914 123128124 + 13.8 0.000 Intergenic Intergenic -17530 NM_001300801 57605 Hs.272759 NM_020845 ENSG00000090975 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein membrane associated 2 protein-coding chr8-1630 chr8 70610416 70610626 + 13.8 0.000 intron (NR_038881, intron 1 of 3) L2c|LINE|L2 1944 NR_038881 286190 Hs.662204 NR_038881 ENSG00000246366 LACTB2-AS1 - LACTB2 antisense RNA 1 ncRNA chr7-1106 chr7 66281920 66282130 + 13.8 0.000 intron (NM_003596, intron 2 of 5) intron (NM_003596, intron 2 of 5) 76691 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr22-915 chr22 32828584 32828794 + 13.8 0.000 intron (NM_000362, intron 1 of 4) MIR3|SINE|MIR 27873 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr1-2338 chr1 247332799 247333009 + 13.8 0.000 Intergenic Intergenic -1037 NM_001329733 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr2-843 chr2 230712594 230712804 + 13.8 0.000 promoter-TSS (NM_001130849) promoter-TSS (NM_001130849) -143 NM_016289 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr9-1374 chr9 36592963 36593173 + 13.8 0.000 intron (NM_001256688, intron 4 of 15) L1ME2|LINE|L1 20173 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chrX-283 chrX 153516096 153516306 + 13.8 0.000 Intergenic Intergenic -19921 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr7-1222 chr7 106057029 106057239 + 13.8 0.000 Intergenic Intergenic 55178 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr14-944 chr14 35341885 35342095 + 13.8 0.000 Intergenic Intergenic 49608 NM_002791 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr2-4979 chr2 203883215 203883425 + 13.8 0.000 Intergenic Intergenic 15549 NM_005214 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr9-2076 chr9 71302707 71302917 + 13.8 0.000 intron (NM_001366143, intron 1 of 25) (AAGG)n|Simple_repeat|Simple_repeat 144159 NM_001366143 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr8-2426 chr8 98556675 98556885 + 13.8 0.000 intron (NM_006281, intron 8 of 10) intron (NM_006281, intron 8 of 10) 129822 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr5-2019 chr5 42811653 42811863 + 13.8 0.000 intron (NM_001093726, intron 1 of 5) intron (NM_001093726, intron 1 of 5) 134 NM_005410 6414 Hs.275775 NM_005410 ENSG00000250722 SELENOP SELP|SEPP|SEPP1|SeP selenoprotein P protein-coding chr4-1280 chr4 72006718 72006928 + 13.8 0.000 Intergenic L2a|LINE|L2 -24981 NM_004885 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr18-394 chr18 2881668 2881878 + 13.8 0.000 intron (NM_032048, intron 2 of 7) intron (NM_032048, intron 2 of 7) 34767 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr16-947 chr16 70346873 70347083 + 13.8 0.000 promoter-TSS (NR_039997) promoter-TSS (NR_039997) 75 NM_018332 55308 Hs.656037 NM_018332 ENSG00000168872 DDX19A DDX19-DDX19L|DDX19L DEAD-box helicase 19A protein-coding chr7-4731 chr7 55119018 55119228 + 13.8 0.000 intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 9284 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr3-2291 chr3 107574720 107574930 + 13.8 0.000 intron (NM_001276286, intron 2 of 16) intron (NM_001276286, intron 2 of 16) 51863 NM_001142568 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr12-1941 chr12 105764377 105764587 + 13.8 0.000 Intergenic Intergenic 57708 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr13-438 chr13 21043782 21043992 + 13.8 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 17699 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chrX-683 chrX 22339904 22340114 + 13.8 0.000 intron (NR_073010, intron 5 of 11) intron (NR_073010, intron 5 of 11) 67096 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr2-4223 chr2 217418218 217418428 + 13.8 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 135590 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2-1727 chr2 230330779 230330989 + 13.8 0.000 intron (NM_001352892, intron 2 of 18) MER44C|DNA|TcMar-Tigger 3713 NM_001308163 93349 Hs.589661 NM_138402 ENSG00000185404 SP140L - SP140 nuclear body protein like protein-coding chr1-2882 chr1 234997376 234997586 + 13.8 0.000 Intergenic Intergenic -33482 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chrX-1333 chrX 134183614 134183824 + 13.8 0.000 Intergenic Intergenic -13441 NR_029523 406899 NR_029523 ENSG00000284157 MIR106A MIRN106A|mir-106|mir-106a microRNA 106a ncRNA chr17-3695 chr17 16927001 16927211 + 13.8 0.000 intron (NR_147084, intron 8 of 12) intron (NR_147084, intron 8 of 12) 6070 NR_147084 96597 NR_147084 TBC1D27P TBC1D27 TBC1 domain family member 27, pseudogene pseudo chr2-2944 chr2 12046694 12046904 + 13.8 0.000 intron (NR_110196, intron 2 of 5) MLT1K|LTR|ERVL-MaLR 39683 NR_110196 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr9-1425 chr9 130698582 130698792 + 13.8 0.000 intron (NR_104230, intron 4 of 7) intron (NR_104230, intron 4 of 7) 4907 NM_014285 23404 Hs.654643 NM_014285 ENSG00000130713 EXOSC2 RRP4|Rrp4p|SHRF|hRrp4p|p7 exosome component 2 protein-coding chr10-2512 chr10 44839528 44839738 + 13.8 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -71683 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr11-1902 chr11 61333141 61333351 + 13.8 0.000 promoter-TSS (NM_001351980) promoter-TSS (NM_001351980) 18 NM_015533 26007 Hs.6278 NM_015533 ENSG00000149476 TKFC DAK|NET45 triokinase and FMN cyclase protein-coding chr13-402 chr13 98653397 98653607 + 13.8 0.000 Intergenic Intergenic 76247 NR_046542 100874069 Hs.594160 NR_046542 STK24-AS1 - STK24 antisense RNA 1 ncRNA chr5-1240 chr5 172420750 172420960 + 13.8 0.000 intron (NM_001017995, intron 2 of 12) MLT1K|LTR|ERVL-MaLR 33668 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr17-2388 chr17 77995148 77995358 + 13.8 0.000 Intergenic Intergenic -8984 NM_018996 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr10-1741 chr10 126387130 126387340 + 13.8 0.000 intron (NM_001288974, intron 1 of 18) intron (NM_001288974, intron 1 of 18) 1242 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr3-2143 chr3 119681377 119681587 + 13.8 0.000 Intergenic Intergenic -4086 NM_005694 10063 Hs.534383 NM_005694 ENSG00000138495 COX17 - cytochrome c oxidase copper chaperone COX17 protein-coding chr18-656 chr18 46035713 46035923 + 13.8 0.000 intron (NM_024430, intron 2 of 14) intron (NM_024430, intron 2 of 14) 36442 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr4-4561 chr4 74109166 74109376 + 13.8 0.000 Intergenic Intergenic -10076 NM_002089 2920 Hs.75765 NM_002089 ENSG00000081041 CXCL2 CINC-2a|GRO2|GROb|MGSA-b|MIP-2a|MIP2|MIP2A|SCYB2 C-X-C motif chemokine ligand 2 protein-coding chr17-4499 chr17 68973228 68973438 + 13.8 0.000 Intergenic Intergenic -17941 NM_001288985 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr22-880 chr22 44550851 44551061 + 13.8 0.000 Intergenic LTR33C|LTR|ERVL -18384 NR_028411 388910 Hs.332685 NM_001012986 ENSG00000187012 LINC00207 NCRNA00207 long intergenic non-protein coding RNA 207 ncRNA chr17-1738 chr17 81213570 81213780 + 13.8 0.000 intron (NM_001319228, intron 2 of 25) L1MC3|LINE|L1 9290 NM_001009811 22994 Hs.514578 NM_014984 ENSG00000141577 CEP131 AZ1|AZI1|ZA1 centrosomal protein 131 protein-coding chr21-634 chr21 45820865 45821075 + 13.8 0.000 intron (NM_001348243, intron 3 of 15) intron (NM_001348243, intron 3 of 15) 15449 NR_038876 100129027 Hs.689591 NR_038876 ENSG00000205424 LOC100129027 - uncharacterized LOC100129027 ncRNA chr1-3128 chr1 52237536 52237746 + 13.8 0.000 exon (NM_004799, exon 4 of 19) exon (NM_004799, exon 4 of 19) 95547 NM_004799 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr6-973 chr6 108621321 108621531 + 13.8 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 60509 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr3-1433 chr3 11669006 11669216 + 13.8 0.000 intron (NM_014667, intron 2 of 5) L2c|LINE|L2 -25196 NM_001128219 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr19-2322 chr19 19137712 19137922 + 13.8 0.000 intron (NM_017814, intron 1 of 11) intron (NM_017814, intron 1 of 11) 661 NM_017814 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr6-3456 chr6 158207432 158207642 + 13.8 0.000 Intergenic L2c|LINE|L2 39190 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chrX-778 chrX 42686627 42686837 + 13.8 0.000 Intergenic Intergenic 91431 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr8-1857 chr8 13258038 13258248 + 13.8 0.000 intron (NM_001348082, intron 5 of 16) intron (NM_001348082, intron 5 of 16) 18378 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chrX-509 chrX 107747695 107747905 + 13.8 0.000 intron (NM_198057, intron 1 of 2) intron (NM_198057, intron 1 of 2) 27987 NM_198057 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr8-969 chr8 101109223 101109433 + 13.8 0.000 Intergenic Intergenic 57274 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr14-946 chr14 36974016 36974226 + 13.8 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -21730 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr22-624 chr22 35313513 35313723 + 13.8 0.000 intron (NR_156428, intron 1 of 13) MIRb|SINE|MIR 13724 NM_005488 10043 Hs.474705 NM_005488 ENSG00000100284 TOM1 - target of myb1 membrane trafficking protein protein-coding chr5-1752 chr5 180071119 180071329 + 13.8 0.000 intron (NM_001280801, intron 1 of 7) intron (NM_001280801, intron 1 of 7) 535 NM_001280801 55819 Hs.484363 NM_018434 ENSG00000113269 RNF130 G1RZFP|GOLIATH|GP ring finger protein 130 protein-coding chr12-3502 chr12 124558322 124558532 + 13.8 0.000 intron (NM_001077261, intron 1 of 47) L2|LINE|L2 9185 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr6-4810 chr6 79987500 79987710 + 13.7 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -17000 NM_001166691 7272 Hs.169840 NM_003318 ENSG00000112742 TTK CT96|ESK|MPH1|MPS1|MPS1L1|PYT TTK protein kinase protein-coding chr7-2782 chr7 74188092 74188302 + 13.7 0.000 intron (NM_031992, intron 2 of 5) intron (NM_031992, intron 2 of 5) -3001 NR_030321 693175 NR_030321 ENSG00000207741 MIR590 MIRN590|hsa-mir-590|mir-590 microRNA 590 ncRNA chr6-1156 chr6 13574385 13574595 + 13.7 0.000 promoter-TSS (NM_031244) promoter-TSS (NM_031244) -39 NM_001242827 23408 Hs.567431 NM_012241 ENSG00000124523 SIRT5 SIR2L5 sirtuin 5 protein-coding chr2-4569 chr2 74522845 74523055 + 13.7 0.000 exon (NM_133637, exon 7 of 12) exon (NM_133637, exon 7 of 12) 3281 NM_133637 165545 Hs.191705 NM_133637 ENSG00000144045 DQX1 - DEAQ-box RNA dependent ATPase 1 protein-coding chr6-1152 chr6 2988776 2988986 + 13.7 0.000 intron (NR_026856, intron 1 of 2) CpG 914 NR_026856 401232 Hs.720158 NM_207495 LINC01011 - long intergenic non-protein coding RNA 1011 ncRNA chr10-1573 chr10 4081646 4081856 + 13.7 0.000 intron (NR_120632, intron 1 of 3) intron (NR_120632, intron 1 of 3) 30025 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA chr4-1215 chr4 134047042 134047252 + 13.7 0.000 Intergenic Intergenic 154642 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr2-4076 chr2 128236766 128236976 + 13.7 0.000 Intergenic Intergenic 81997 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr2-2432 chr2 42836110 42836320 + 13.7 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -43632 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr1-6655 chr1 46445416 46445626 + 13.7 0.000 non-coding (NR_045483, exon 9 of 9) non-coding (NR_045483, exon 9 of 9) 4183 NR_121680 101929651 Hs.638707 NR_121680 ENSG00000224863 LINC01398 - long intergenic non-protein coding RNA 1398 ncRNA chr12-1070 chr12 132723875 132724085 + 13.7 0.000 Intergenic 5S|rRNA|rRNA 13138 NM_138575 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr16-2439 chr16 82301104 82301314 + 13.7 0.000 Intergenic MIRb|SINE|MIR -130985 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr7-3266 chr7 10766603 10766813 + 13.7 0.000 intron (NR_147499, intron 1 of 2) intron (NR_147499, intron 1 of 2) 13236 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA chr12-2149 chr12 110354932 110355142 + 13.7 0.000 Intergenic L1MC3|LINE|L1 48693 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chrX-590 chrX 115583498 115583708 + 13.7 0.000 intron (NM_001282337, intron 1 of 17) intron (NM_001282337, intron 1 of 17) -9948 NM_001282338 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr22-1809 chr22 33922427 33922637 + 13.7 0.000 5' UTR (NM_001362951, exon 1 of 15) 5' UTR (NM_001362951, exon 1 of 15) 356 NM_001362949 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr7-2607 chr7 151211739 151211949 + 13.7 0.000 3' UTR (NM_007189, exon 15 of 15) 3' UTR (NM_007189, exon 15 of 15) -1356 NM_001369125 114483833 Hs.686793 NM_001369125 LOC114483833 - novel histone H2B-like protein protein-coding chr1-1992 chr1 11034133 11034343 + 13.7 0.000 intron (NM_006610, intron 8 of 10) AluSx|SINE|Alu 13001 NM_139208 10747 Hs.655645 NM_006610 ENSG00000009724 MASP2 MAP19|MASP-2|MASP1P1|sMAP mannan binding lectin serine peptidase 2 protein-coding chr17-1455 chr17 42895204 42895414 + 13.7 0.000 intron (NR_027254, intron 1 of 5) intron (NR_027254, intron 1 of 5) 3425 NR_027254 388387 Hs.632257 NM_207388 ENSG00000213373 LINC00671 - long intergenic non-protein coding RNA 671 ncRNA chr1-8413 chr1 86475415 86475625 + 13.7 0.000 intron (NM_001285, intron 3 of 13) L2c|LINE|L2 6593 NM_001285 1179 Hs.194659 NM_001285 ENSG00000016490 CLCA1 CACC|CACC1|CLCRG1|CaCC-1|GOB5|hCLCA1|hCaCC-1 chloride channel accessory 1 protein-coding chr16-896 chr16 1431590 1431800 + 13.7 0.000 intron (NM_001365310, intron 1 of 1) intron (NM_001365310, intron 1 of 1) 2876 NM_001365310 105371045 NM_001365310 ENSG00000284395 LOC105371045 gs104 uncharacterized LOC105371045 protein-coding chr5-4391 chr5 177382743 177382953 + 13.7 0.000 Intergenic Intergenic -1586 NM_003052 6569 Hs.936 NM_003052 ENSG00000131183 SLC34A1 FRTS2|HCINF2|NAPI-3|NPHLOP1|NPT2|NPTIIa|SLC11|SLC17A2 solute carrier family 34 member 1 protein-coding chr12-1561 chr12 112013975 112014185 + 13.7 0.000 promoter-TSS (NR_122119) promoter-TSS (NR_122119) 654 NM_006817 10961 Hs.75841 NM_006817 ENSG00000089248 ERP29 C12orf8|ERp28|ERp31|HEL-S-107|PDI-DB|PDIA9 endoplasmic reticulum protein 29 protein-coding chr18-464 chr18 36572133 36572343 + 13.7 0.000 intron (NM_001281740, intron 5 of 28) intron (NM_001281740, intron 5 of 28) 91180 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr2-5220 chr2 46187178 46187388 + 13.7 0.000 3' UTR (NM_005400, exon 15 of 15) 3' UTR (NM_005400, exon 15 of 15) -110124 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr22-963 chr22 17087718 17087928 + 13.7 0.000 intron (NM_014339, intron 1 of 12) intron (NM_014339, intron 1 of 12) 2864 NM_001289905 23765 Hs.48353 NM_014339 ENSG00000177663 IL17RA CANDF5|CD217|CDw217|IL-17RA|IL17R|IMD51|hIL-17R interleukin 17 receptor A protein-coding chr3-6824 chr3 147195964 147196174 + 13.7 0.000 Intergenic MER5A|DNA|hAT-Charlie 196361 NR_033119 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chr1-3723 chr1 221101852 221102062 + 13.7 0.000 Intergenic Intergenic -221817 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr9-682 chr9 34612070 34612280 + 13.7 0.000 promoter-TSS (NM_148179) promoter-TSS (NM_148179) -78 NM_148179 138716 Hs.15961 NM_148178 ENSG00000164967 RPP25L C9orf23|bA296L22.5 ribonuclease P/MRP subunit p25 like protein-coding chr3-1929 chr3 188974907 188975117 + 13.7 0.000 Intergenic MIR|SINE|MIR -27373 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr4-1896 chr4 16415216 16415426 + 13.7 0.000 Intergenic HAL1|LINE|L1 188658 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr2-5756 chr2 219632584 219632794 + 13.7 0.000 intron (NM_005070, intron 8 of 22) intron (NM_005070, intron 8 of 22) 5059 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr4-1193 chr4 54082219 54082429 + 13.7 0.000 Intergenic Intergenic -17719 NM_012110 26511 Hs.335393 NM_012110 ENSG00000109220 CHIC2 BTL cysteine rich hydrophobic domain 2 protein-coding chr16-2065 chr16 80147180 80147390 + 13.7 0.000 Intergenic MIRb|SINE|MIR 352036 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chrX-671 chrX 2812378 2812588 + 13.7 0.000 intron (NM_001141920, intron 9 of 9) intron (NM_001141920, intron 9 of 9) -16339 NM_001184703 8908 Hs.567381 NM_003918 ENSG00000056998 GYG2 GN-2|GN2 glycogenin 2 protein-coding chr2-2861 chr2 165285095 165285305 + 13.7 0.000 intron (NM_001040143, intron 2 of 27) intron (NM_001040143, intron 2 of 27) -8855 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr4-1135 chr4 5722499 5722709 + 13.7 0.000 intron (NM_001306090, intron 2 of 20) intron (NM_001306090, intron 2 of 20) 11403 NM_153717 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr6-2269 chr6 72261050 72261260 + 13.7 0.000 intron (NM_001350432, intron 14 of 19) intron (NM_001350432, intron 14 of 19) 44214 NM_001350474 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr11-2155 chr11 69672023 69672233 + 13.7 0.000 intron (NM_153451, intron 2 of 4) MLT1F|LTR|ERVL-MaLR 3225 NM_153451 220064 Hs.667996 NM_153451 ENSG00000149716 LTO1 CIAB1|ORAOV1|TAOS1 LTO1 maturation factor of ABCE1 protein-coding chr2-2103 chr2 241491966 241492176 + 13.7 0.000 TTS (NM_001271977) TTS (NM_001271977) 14166 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr11-5673 chr11 129249472 129249682 + 13.7 0.000 intron (NR_145484, intron 1 of 1) intron (NR_145484, intron 1 of 1) 33587 NR_145484 399975 NM_207431 LOC399975 - uncharacterized LOC399975 ncRNA chr18-321 chr18 3509027 3509237 + 13.7 0.000 intron (NM_001242762, intron 7 of 9) intron (NM_001242762, intron 7 of 9) 42882 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr8-2002 chr8 96559695 96559905 + 13.7 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) 65987 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr15-2214 chr15 91481212 91481422 + 13.7 0.000 intron (NR_110106, intron 2 of 3) intron (NR_110106, intron 2 of 3) 17978 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr14-1543 chr14 63040062 63040272 + 13.7 0.000 intron (NM_139318, intron 1 of 10) intron (NM_139318, intron 1 of 10) 5291 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr12-1456 chr12 125093318 125093528 + 13.7 0.000 intron (NM_001319839, intron 5 of 16) intron (NM_001319839, intron 5 of 16) 27988 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr2-3487 chr2 190980329 190980539 + 13.7 0.000 intron (NM_007315, intron 19 of 24) intron (NM_007315, intron 19 of 24) 33816 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr8-2916 chr8 144223794 144224004 + 13.7 0.000 intron (NM_001288814, intron 13 of 41) intron (NM_001288814, intron 13 of 41) 38838 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr8-3143 chr8 70615940 70616150 + 13.7 0.000 intron (NR_038881, intron 1 of 3) intron (NR_038881, intron 1 of 3) 7468 NR_038881 286190 Hs.662204 NR_038881 ENSG00000246366 LACTB2-AS1 - LACTB2 antisense RNA 1 ncRNA chr2-2339 chr2 180034246 180034456 + 13.7 0.000 Intergenic L1MA2|LINE|L1 -27054 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr14-997 chr14 102323090 102323300 + 13.7 0.000 intron (NM_018335, intron 1 of 7) MER20|DNA|hAT-Charlie 3449 NM_018335 55778 Hs.743359 NM_018335 ENSG00000022976 ZNF839 C14orf131 zinc finger protein 839 protein-coding chr12-3133 chr12 40618627 40618837 + 13.7 0.000 Intergenic Intergenic -73707 NM_001843 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chrX-228 chrX 75273967 75274177 + 13.7 0.000 promoter-TSS (NM_145052) promoter-TSS (NM_145052) 13 NM_001307944 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chrX-513 chrX 132665696 132665906 + 13.7 0.000 intron (NM_147175, intron 3 of 3) intron (NM_147175, intron 3 of 3) -1841 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr12-2443 chr12 52395237 52395447 + 13.7 0.000 intron (NM_033033, intron 8 of 8) intron (NM_033033, intron 8 of 8) -9690 NM_033045 3890 Hs.272336 NM_033045 ENSG00000161849 KRT84 HB4|KRTHB4 keratin 84 protein-coding chr8-1545 chr8 104336999 104337209 + 13.7 0.000 Intergenic Intergenic -2692 NM_001257317 81501 Hs.652230 NM_030788 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding chr1-4979 chr1 58727331 58727541 + 13.7 0.000 Intergenic Intergenic -27374 NM_001085487 114803 Hs.744921 NM_001085487 ENSG00000162601 MYSM1 2A-DUB|2ADUB|BMFS4 Myb like, SWIRM and MPN domains 1 protein-coding chr12-2957 chr12 106682913 106683123 + 13.7 0.000 intron (NR_038912, intron 2 of 3) MER103C|DNA|hAT-Charlie 1682 NR_038912 100505978 Hs.662583 NR_038912 ENSG00000257711 LOC100505978 - uncharacterized LOC100505978 ncRNA chr14-1178 chr14 56675897 56676107 + 13.7 0.000 Intergenic Intergenic 96204 NM_017799 54916 Hs.497253 NM_017799 ENSG00000070269 TMEM260 C14orf101|SHDRA transmembrane protein 260 protein-coding chr1-5168 chr1 167344189 167344399 + 13.7 0.000 intron (NM_001365849, intron 3 of 16) intron (NM_001365849, intron 3 of 16) 15224 NM_001198783 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chr3-2278 chr3 66763162 66763372 + 13.7 0.000 Intergenic Intergenic -24931 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr10-1369 chr10 132383841 132384051 + 13.7 0.000 Intergenic Intergenic -13254 NM_138499 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr12-1825 chr12 12839971 12840181 + 13.7 0.000 Intergenic Intergenic 26730 NM_201224 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr2-865 chr2 197255657 197255867 + 13.7 0.000 intron (NR_046837, intron 5 of 5) intron (NR_046837, intron 5 of 5) 46757 NR_046837 101927547 Hs.687027 NR_046837 ENSG00000236977 ANKRD44-IT1 - ANKRD44 intronic transcript 1 ncRNA chr8-511 chr8 97844393 97844603 + 13.7 0.000 intron (NM_018407, intron 6 of 6) ERVL-B4-int|LTR|ERVL -24566 NM_001317748 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr5-1723 chr5 142699118 142699328 + 13.7 0.000 Intergenic Intergenic -1153 NM_001257205 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr1-8692 chr1 223343659 223343869 + 13.7 0.000 intron (NM_017982, intron 2 of 8) intron (NM_017982, intron 2 of 8) 20412 NM_001037175 55061 Hs.497841 NM_017982 ENSG00000143502 SUSD4 PRO222 sushi domain containing 4 protein-coding chr6-4847 chr6 86200592 86200802 + 13.7 0.000 Intergenic L1M4b|LINE|L1 -521964 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr13-1621 chr13 50617490 50617700 + 13.7 0.000 Intergenic Intergenic -90146 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr11-2304 chr11 64313648 64313858 + 13.7 0.000 intron (NM_001282451, intron 2 of 6) intron (NM_001282451, intron 2 of 6) 4331 NM_016404 51504 Hs.333579 NM_016404 ENSG00000173113 TRMT112 HSPC152|HSPC170|TRM112|TRMT11-2|hTrm112 tRNA methyltransferase subunit 11-2 protein-coding chr1-3877 chr1 51796464 51796674 + 13.7 0.000 intron (NM_001101662, intron 22 of 30) L1MB2|LINE|L1 39833 NR_031580 100313892 NR_031580 ENSG00000283899 MIR761 hsa-mir-761 microRNA 761 ncRNA chr11-1761 chr11 2192311 2192521 + 13.7 0.000 Intergenic Intergenic 19353 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr9-778 chr9 136644522 136644732 + 13.7 0.000 Intergenic Intergenic -14229 NR_046367 51162 Hs.91481 NM_016215 ENSG00000172889 EGFL7 NEU1|VE-STATIN|ZNEU1 EGF like domain multiple 7 protein-coding chr11-2866 chr11 15158566 15158776 + 13.7 0.000 intron (NM_001042536, intron 2 of 12) MIRb|SINE|MIR 9569 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr17-1714 chr17 55576300 55576510 + 13.7 0.000 Intergenic L2a|LINE|L2 146459 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr2-1624 chr2 237128218 237128428 + 13.7 0.000 Intergenic Intergenic 42434 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr1-4642 chr1 179519136 179519346 + 13.7 0.000 intron (NR_073544, intron 21 of 25) L1PA13|LINE|L1 56707 NM_001297575 7827 Hs.412710 NM_014625 ENSG00000116218 NPHS2 PDCN|SRN1 NPHS2 stomatin family member, podocin protein-coding chr22-2525 chr22 24772581 24772791 + 13.7 0.000 intron (NR_045648, intron 1 of 21) intron (NR_045648, intron 1 of 21) 2034 NM_001008496 440822 Hs.448343 NM_001008496 ENSG00000184571 PIWIL3 HIWI3 piwi like RNA-mediated gene silencing 3 protein-coding chr17-2295 chr17 40362781 40362991 + 13.7 0.000 3' UTR (NM_152219, exon 1 of 1) 3' UTR (NM_152219, exon 1 of 1) 1851 NM_152219 125111 Hs.444663 NM_152219 ENSG00000183153 GJD3 CX31.9|Cx30.2|GJA11|GJC1 gap junction protein delta 3 protein-coding chr6-2177 chr6 33987672 33987882 + 13.7 0.000 Intergenic MIR|SINE|MIR 12274 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr10-2489 chr10 32710748 32710958 + 13.7 0.000 intron (NM_001321115, intron 25 of 43) MER76|LTR|ERVL 190619 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr18-1103 chr18 63683451 63683661 + 13.7 0.000 Intergenic Intergenic -18751 NM_080475 89778 Hs.350958 NM_080475 ENSG00000206072 SERPINB11 EPIPIN|SERPIN11 serpin family B member 11 (gene/pseudogene) protein-coding chr11-2404 chr11 6357297 6357507 + 13.7 0.000 Intergenic Intergenic -33072 NM_001007593 6609 Hs.498173 NM_000543 ENSG00000166311 SMPD1 ASM|ASMASE|NPD sphingomyelin phosphodiesterase 1 protein-coding chr11-2946 chr11 73608109 73608319 + 13.7 0.000 Intergenic (TTTTG)n|Simple_repeat|Simple_repeat -10102 NM_001286051 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chrX-719 chrX 136768489 136768699 + 13.7 0.000 promoter-TSS (NM_001306177) promoter-TSS (NM_001306177) -779 NM_001306177 9459 Hs.522795 NM_004840 ENSG00000129675 ARHGEF6 COOL2|Cool-2|MRX46|PIXA|alpha-PIX|alphaPIX Rac/Cdc42 guanine nucleotide exchange factor 6 protein-coding chr22-715 chr22 26398740 26398950 + 13.7 0.000 Intergenic Intergenic -30415 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr20-463 chr20 63854327 63854537 + 13.7 0.000 Intergenic Intergenic -6781 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr11-2243 chr11 76049624 76049834 + 13.7 0.000 intron (NM_003369, intron 12 of 14) intron (NM_003369, intron 12 of 14) 156773 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr13-560 chr13 28139279 28139489 + 13.7 0.000 promoter-TSS (NR_029383) promoter-TSS (NR_029383) -210 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr8-2795 chr8 122096619 122096829 + 13.7 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -455284 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr3-1353 chr3 177731748 177731958 + 13.7 0.000 intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -85012 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr11-4351 chr11 73284267 73284477 + 13.7 0.000 intron (NM_001277207, intron 2 of 2) intron (NM_001277207, intron 2 of 2) 12230 NM_001277204 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr9-1406 chr9 116644132 116644342 + 13.7 0.000 intron (NM_014010, intron 16 of 21) intron (NM_014010, intron 16 of 21) 42978 NM_198186 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr9-2102 chr9 88791453 88791663 + 13.7 0.000 Intergenic Intergenic -45653 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr14-2698 chr14 83855676 83855886 + 13.7 0.000 Intergenic Intergenic 1213149 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr11-5574 chr11 105483452 105483662 + 13.7 0.000 Intergenic AluJr|SINE|Alu -126516 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr18-672 chr18 56168444 56168654 + 13.7 0.000 intron (NR_148972, intron 3 of 8) intron (NR_148972, intron 3 of 8) 22713 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr15-500 chr15 80779130 80779340 + 13.7 0.000 promoter-TSS (NM_001293298) promoter-TSS (NM_001293298) -135 NM_001293298 57214 Hs.459088 NM_018689 ENSG00000103888 CEMIP CCSP1|HYBID|KIAA1199|TMEM2L cell migration inducing hyaluronidase 1 protein-coding chr22-907 chr22 28282352 28282562 + 13.7 0.000 intron (NM_001145418, intron 5 of 22) MER3|DNA|hAT-Charlie -177412 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr6-1225 chr6 113376298 113376508 + 13.7 0.000 Intergenic Intergenic 57044 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr3-3674 chr3 147248824 147249034 + 13.7 0.000 Intergenic Intergenic 143501 NR_033119 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chr2-3251 chr2 238297287 238297497 + 13.7 0.000 Intergenic Intergenic -8782 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr1-3015 chr1 234631839 234632049 + 13.7 0.000 intron (NR_033927, intron 1 of 1) MLT1K|LTR|ERVL-MaLR 2633 NR_033927 100302691 Hs.209162 NR_033927 ENSG00000224939 LINC00184 HANC|NCRNA00184 long intergenic non-protein coding RNA 184 ncRNA chr1-3164 chr1 85360485 85360695 + 13.7 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) 43916 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr3-4048 chr3 74633236 74633446 + 13.7 0.000 Intergenic Intergenic -112201 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr17-1700 chr17 38958911 38959121 + 13.7 0.000 intron (NM_001008777, intron 3 of 10) AluJo|SINE|Alu 8387 NM_001008777 494188 Hs.549536 NM_001008777 ENSG00000204952 FBXO47 - F-box protein 47 protein-coding chr19-3148 chr19 32464272 32464482 + 13.7 0.000 intron (NM_207325, intron 14 of 18) intron (NM_207325, intron 14 of 18) 58252 NM_207325 147991 Hs.194392 NM_207325 ENSG00000178904 DPY19L3 - dpy-19 like C-mannosyltransferase 3 protein-coding chr14-1737 chr14 60106418 60106628 + 13.7 0.000 intron (NM_022495, intron 1 of 9) L3|LINE|CR1 14600 NM_001330177 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chr2-1716 chr2 217248476 217248686 + 13.7 0.000 Intergenic Intergenic -34152 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2-4638 chr2 175335419 175335629 + 13.7 0.000 Intergenic L1MA4A|LINE|L1 -153814 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr16-1568 chr16 85492063 85492273 + 13.7 0.000 Intergenic Intergenic -119241 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr6-2112 chr6 766923 767133 + 13.7 0.000 Intergenic Intergenic -73887 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr17-2037 chr17 41678496 41678706 + 13.7 0.000 Intergenic MER31B|LTR|ERV1 -10284 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding chr1-4511 chr1 31570948 31571158 + 13.7 0.000 Intergenic Intergenic -5432 NM_001204414 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr18-341 chr18 57976359 57976569 + 13.7 0.000 Intergenic Charlie15b|DNA|hAT-Charlie -67762 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr6-523 chr6 169702173 169702383 + 13.7 0.000 promoter-TSS (NM_001350623) promoter-TSS (NM_001350623) 152 NM_001317342 387263 Hs.591375 NM_001029863 ENSG00000185127 C6orf120 - chromosome 6 open reading frame 120 protein-coding chr5-2155 chr5 100797851 100798061 + 13.7 0.000 Intergenic Intergenic 18609 NR_031686 100302288 NR_031686 ENSG00000221263 MIR548P MIRN548P|hsa-mir-548p microRNA 548p ncRNA chr5-2040 chr5 96226973 96227183 + 13.7 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 147940 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr21-865 chr21 37374786 37374996 + 13.7 0.000 intron (NM_001347723, intron 1 of 10) MER5A|DNA|hAT-Charlie 7334 NM_101395 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr1-1561 chr1 7704555 7704765 + 13.7 0.000 promoter-TSS (NM_001349626) promoter-TSS (NM_001349626) -76 NM_001349619 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr1-4316 chr1 40144183 40144393 + 13.7 0.000 Intergenic MIRb|SINE|MIR -17099 NM_012421 6018 Hs.205627 NM_012421 ENSG00000117000 RLF ZN-15L|ZNF292L rearranged L-myc fusion protein-coding chrX-2354 chrX 65715576 65715786 + 13.7 0.000 intron (NM_002444, intron 1 of 12) L1PA13|LINE|L1 48027 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr6-1632 chr6 107564411 107564621 + 13.7 0.000 intron (NM_018013, intron 4 of 6) intron (NM_018013, intron 4 of 6) 74399 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr1-3768 chr1 3250775 3250985 + 13.7 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 122905 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr22-1061 chr22 18062859 18063069 + 13.7 0.000 Intergenic Intergenic -14956 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr12-1518 chr12 65695588 65695798 + 13.7 0.000 Intergenic LFSINE_Vert|SINE|tRNA -53321 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr3-2365 chr3 168248596 168248806 + 13.7 0.000 promoter-TSS (NR_021485) promoter-TSS (NR_021485) -821 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr6-1867 chr6 55953466 55953676 + 13.7 0.000 Intergenic Intergenic -77981 NM_021073 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr17-5348 chr17 29346647 29346857 + 13.7 0.000 Intergenic AluJb|SINE|Alu -43910 NR_039749 100616122 NR_039749 ENSG00000284162 MIR4523 - microRNA 4523 ncRNA chr11-1273 chr11 57514848 57515058 + 13.7 0.000 promoter-TSS (NM_001198810) promoter-TSS (NM_001198810) -44 NM_001198810 8501 Hs.591952 NM_003627 ENSG00000149150 SLC43A1 LAT3|PB39|POV1|R00504 solute carrier family 43 member 1 protein-coding chr11-1878 chr11 2162977 2163187 + 13.7 0.000 TTS (NM_000360) TTS (NM_000360) -1873 NM_001185097 3630 Hs.272259 NM_000207 ENSG00000254647 INS IDDM|IDDM1|IDDM2|ILPR|IRDN|MODY10 insulin protein-coding chr9-1480 chr9 121370144 121370354 + 13.7 0.000 promoter-TSS (NR_073037) promoter-TSS (NR_073037) 1 NR_073037 2040 Hs.253903 NM_004099 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding chr6-3036 chr6 54427758 54427968 + 13.7 0.000 Intergenic Intergenic 119422 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr1-2853 chr1 155207145 155207355 + 13.7 0.000 intron (NM_001252608, intron 1 of 20) intron (NM_001252608, intron 1 of 20) 647 NM_007112 7059 Hs.169875 NM_007112 ENSG00000169231 THBS3 TSP3 thrombospondin 3 protein-coding chr1-2737 chr1 24949217 24949427 + 13.7 0.000 intron (NM_001320672, intron 2 of 6) intron (NM_001320672, intron 2 of 6) 15688 NM_001320672 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr11-3239 chr11 72075279 72075489 + 13.7 0.000 intron (NM_001286561, intron 1 of 26) LTR50|LTR|ERVL -3082 NR_036123 100422953 NR_036123 ENSG00000263742 MIR3165 mir-3165 microRNA 3165 ncRNA chr10-1376 chr10 8060309 8060519 + 13.7 0.000 intron (NM_002051, intron 3 of 5) intron (NM_002051, intron 3 of 5) 5726 NM_001002295 2625 Hs.524134 NM_002051 ENSG00000107485 GATA3 HDR|HDRS GATA binding protein 3 protein-coding chr16-1277 chr16 66926930 66927140 + 13.7 0.000 Intergenic Intergenic -1499 NM_001128850 6236 Hs.1027 NM_004165 ENSG00000166592 RRAD RAD|RAD1|REM3 RRAD, Ras related glycolysis inhibitor and calcium channel regulator protein-coding chr1-3901 chr1 64358618 64358828 + 13.7 0.000 Intergenic Intergenic -111406 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr2-1180 chr2 32947788 32947998 + 13.7 0.000 intron (NM_206943, intron 1 of 33) CpG 940 NM_206943 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr10-1660 chr10 112732739 112732949 + 13.7 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -90652 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr6-1654 chr6 147205988 147206198 + 13.7 0.000 intron (NM_139244, intron 2 of 25) intron (NM_139244, intron 2 of 25) -1479 NR_034115 729178 Hs.557608 NR_034115 STXBP5-AS1 - STXBP5 antisense RNA 1 ncRNA chr2-1644 chr2 28810538 28810748 + 13.7 0.000 promoter-TSS (NM_001142634) promoter-TSS (NM_001142634) -191 NM_182756 245711 Hs.511956 NM_182756 ENSG00000163806 SPDYA RINGO3|RINGOA|SPDY1|SPY1 speedy/RINGO cell cycle regulator family member A protein-coding chr2-1942 chr2 219453548 219453758 + 13.7 0.000 intron (NM_005876, intron 6 of 40) intron (NM_005876, intron 6 of 40) -7159 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr3-4275 chr3 152298464 152298674 + 13.7 0.000 promoter-TSS (NM_207293) promoter-TSS (NM_207293) -445 NM_001363870 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding chr11-1315 chr11 69639161 69639371 + 13.7 0.000 Intergenic CpG -1839 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr5-3185 chr5 76485606 76485816 + 13.7 0.000 intron (NM_006633, intron 2 of 35) intron (NM_006633, intron 2 of 35) -61698 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr2-3598 chr2 72129879 72130089 + 13.7 0.000 3' UTR (NM_019885, exon 6 of 6) 3' UTR (NM_019885, exon 6 of 6) 17878 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr18-302 chr18 22930193 22930403 + 13.7 0.000 Intergenic Charlie17a|DNA|hAT-Charlie -3030 NM_002894 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr9-1704 chr9 99485575 99485785 + 13.7 0.000 Intergenic L2c|LINE|L2 -110423 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr5-2506 chr5 154592324 154592534 + 13.7 0.000 Intergenic L1PA8|LINE|L1 3643 NR_036094 100422950 NR_036094 ENSG00000264760 MIR3141 mir-3141 microRNA 3141 ncRNA chr4-1282 chr4 76579728 76579938 + 13.7 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 4282 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr1-4240 chr1 203038065 203038275 + 13.7 0.000 intron (NM_001304331, intron 1 of 29) intron (NM_001304331, intron 1 of 29) 11679 NM_001304332 8497 Hs.153648 NM_015053 ENSG00000143847 PPFIA4 - PTPRF interacting protein alpha 4 protein-coding chr22-1818 chr22 36314770 36314980 + 13.7 0.000 intron (NM_002473, intron 12 of 40) AluJb|SINE|Alu -27968 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr9-1781 chr9 136615454 136615664 + 13.7 0.000 non-coding (NR_135288, exon 1 of 3) non-coding (NR_135288, exon 1 of 3) 1622 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr4-5305 chr4 178562566 178562776 + 13.7 0.000 Intergenic Intergenic -654735 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr10-1662 chr10 114541504 114541714 + 13.7 0.000 intron (NM_001352440, intron 6 of 20) intron (NM_001352440, intron 6 of 20) -14696 NM_001322899 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr10-2493 chr10 33264409 33264619 + 13.7 0.000 intron (NR_045259, intron 2 of 15) intron (NR_045259, intron 2 of 15) 70153 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr11-5848 chr11 9108360 9108570 + 13.7 0.000 Intergenic Intergenic 14102 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr1-3019 chr1 244454880 244455090 + 13.7 0.000 Intergenic HUERS-P1-int|LTR|ERV1 -2925 NM_001365073 159 Hs.498313 NM_001126 ENSG00000035687 ADSS ADEH|ADSS 2|ADSS2 adenylosuccinate synthase protein-coding chr11-2426 chr11 17846887 17847097 + 13.7 0.000 intron (NR_104040, intron 11 of 11) intron (NR_104040, intron 11 of 11) 111044 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr7-647 chr7 55255578 55255788 + 13.7 0.000 promoter-TSS (NR_110426) promoter-TSS (NR_110426) -48 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr7-2231 chr7 130409268 130409478 + 13.7 0.000 intron (NR_046443, intron 5 of 10) intron (NR_046443, intron 5 of 10) 28879 NM_001868 1357 Hs.2879 NM_001868 ENSG00000091704 CPA1 CPA carboxypeptidase A1 protein-coding chr19-1361 chr19 57681721 57681931 + 13.7 0.000 promoter-TSS (NM_138347) promoter-TSS (NM_138347) -151 NM_001270938 90233 Hs.109540 NM_138347 ENSG00000204519 ZNF551 - zinc finger protein 551 protein-coding chrX-1821 chrX 99242351 99242561 + 13.7 0.000 Intergenic L1PB4|LINE|L1 1167817 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr20-1114 chr20 8932792 8933002 + 13.7 0.000 Intergenic MIRb|SINE|MIR 101712 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr14-2430 chr14 71061025 71061235 + 13.7 0.000 intron (NM_014982, intron 26 of 35) Tigger3|DNA|TcMar-Tigger 153671 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr12-569 chr12 49974188 49974398 + 13.7 0.000 intron (NM_001652, intron 1 of 3) intron (NM_001652, intron 1 of 3) 1346 NM_001652 363 Hs.54505 NM_001652 ENSG00000086159 AQP6 AQP2L|KID aquaporin 6 protein-coding chr11-2357 chr11 111574534 111574744 + 13.7 0.000 Intergenic Intergenic -27810 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr19-3375 chr19 12695642 12695852 + 13.7 0.000 intron (NM_032301, intron 1 of 9) intron (NM_032301, intron 1 of 9) 884 NM_032301 84261 Hs.515154 NM_032301 ENSG00000132004 FBXW9 Fbw9|MEC-15 F-box and WD repeat domain containing 9 protein-coding chr13-717 chr13 73602527 73602737 + 13.7 0.000 Intergenic L1PREC2|LINE|L1 38388 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr17-2162 chr17 45294426 45294636 + 13.7 0.000 intron (NM_003954, intron 1 of 15) Charlie4z|DNA|hAT-Charlie 22489 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding chr9-1056 chr9 70413961 70414171 + 13.7 0.000 5' UTR (NM_001206, exon 1 of 2) 5' UTR (NM_001206, exon 1 of 2) 591 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr3-3293 chr3 139117155 139117365 + 13.7 0.000 intron (NR_026783, intron 2 of 2) Tigger3|DNA|TcMar-Tigger 13075 NR_026783 60467 Hs.512673 NM_021812 ENSG00000232416 BPESC1 NCRNA00187 blepharophimosis, epicanthus inversus and ptosis candidate 1 ncRNA chr4-2189 chr4 116358795 116359005 + 13.7 0.000 Intergenic HERVL18-int|LTR|ERVL 59175 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr7-2855 chr7 108051568 108051778 + 13.7 0.000 intron (NM_001318046, intron 26 of 33) intron (NM_001318046, intron 26 of 33) -48512 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr7-2547 chr7 82534808 82535018 + 13.7 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -90957 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr14-2901 chr14 37697493 37697703 + 13.7 0.000 intron (NM_001310135, intron 6 of 32) intron (NM_001310135, intron 6 of 32) -74785 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr3-1609 chr3 12679576 12679786 + 13.7 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -15480 NM_002880 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr6-1348 chr6 41488594 41488804 + 13.7 0.000 Intergenic Intergenic -13745 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr10-1743 chr10 126906232 126906442 + 13.7 0.000 intron (NM_001290223, intron 1 of 51) CpG 928 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr17-2942 chr17 57530077 57530287 + 13.7 0.000 intron (NM_001322250, intron 7 of 13) intron (NM_001322250, intron 7 of 13) -6585 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr2-4071 chr2 126373639 126373849 + 13.7 0.000 Intergenic HERVL18-int|LTR|ERVL -255759 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr1-2253 chr1 197774880 197775090 + 13.7 0.000 intron (NR_125340, intron 1 of 19) CpG 495 NM_001300858 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr1-9881 chr1 67465424 67465634 + 13.7 0.000 Intergenic Intergenic -35127 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr9-3208 chr9 133635975 133636185 + 13.7 0.000 promoter-TSS (NM_000787) promoter-TSS (NM_000787) -283 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr13-1151 chr13 32883773 32883983 + 13.7 0.000 intron (NR_047020, intron 3 of 4) MIR|SINE|MIR 27774 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr21-275 chr21 42097954 42098164 + 13.7 0.000 intron (NM_001004416, intron 6 of 22) intron (NM_001004416, intron 6 of 22) 10475 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr2-3395 chr2 27811019 27811229 + 13.7 0.000 intron (NM_022128, intron 7 of 7) L2b|LINE|L2 39405 NM_004891 9553 Hs.515879 NM_004891 ENSG00000243147 MRPL33 C2orf1|L33mt|MRP-L33|RPL33L mitochondrial ribosomal protein L33 protein-coding chr7-2564 chr7 106486427 106486637 + 13.7 0.000 Intergenic Intergenic 174626 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr3-1462 chr3 52226042 52226252 + 13.7 0.000 promoter-TSS (NM_017442) promoter-TSS (NM_017442) 16 NM_017442 54106 Hs.87968 NM_017442 ENSG00000239732 TLR9 CD289 toll like receptor 9 protein-coding chr3-974 chr3 140529228 140529438 + 13.7 0.000 intron (NM_022131, intron 8 of 16) intron (NM_022131, intron 8 of 16) -20544 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr2-2465 chr2 105337384 105337594 + 13.7 0.000 promoter-TSS (NM_024093) promoter-TSS (NM_024093) -51 NM_001286537 79074 Hs.549577 NM_024093 ENSG00000135974 C2orf49 asw chromosome 2 open reading frame 49 protein-coding chr17-2396 chr17 80265465 80265675 + 13.7 0.000 intron (NM_020954, intron 2 of 16) ERVL-B4-int|LTR|ERVL 4718 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr20-1230 chr20 31754373 31754583 + 13.7 0.000 intron (NM_012112, intron 2 of 17) intron (NM_012112, intron 2 of 17) 15188 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr1-5189 chr1 173431256 173431466 + 13.7 0.000 intron (NR_125960, intron 1 of 1) intron (NR_125960, intron 1 of 1) 30001 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr16-1295 chr16 85297078 85297288 + 13.7 0.000 Intergenic Intergenic 9142 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr14-1087 chr14 37117592 37117802 + 13.7 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -54329 NR_033240 100129794 Hs.601579 NR_033240 ENSG00000258708 SLC25A21-AS1 - SLC25A21 antisense RNA 1 ncRNA chr9-1825 chr9 129569752 129569962 + 13.7 0.000 Intergenic L2a|LINE|L2 -39027 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr5-1169 chr5 14055115 14055325 + 13.7 0.000 Intergenic Intergenic -88122 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr6-2229 chr6 44464005 44464215 + 13.7 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 28469 NR_039785 100616352 NR_039785 ENSG00000266619 MIR4642 - microRNA 4642 ncRNA chr2-1429 chr2 201149152 201149362 + 13.7 0.000 intron (NR_040030, intron 4 of 6) intron (NR_040030, intron 4 of 6) 8535 NR_040030 65072 Hs.664613 NR_040030 ENSG00000226312 CFLAR-AS1 ALS2CR10 CFLAR antisense RNA 1 ncRNA chr8-970 chr8 101181042 101181252 + 13.7 0.000 Intergenic L3|LINE|CR1 24526 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr13-310 chr13 20773864 20774074 + 13.7 0.000 promoter-TSS (NR_134934) promoter-TSS (NR_134934) -8 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr3-2321 chr3 129549463 129549673 + 13.7 0.000 intron (NM_001308262, intron 2 of 3) L2c|LINE|L2 1183 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr12-1189 chr12 94983689 94983899 + 13.7 0.000 intron (NM_001258338, intron 2 of 2) L2|LINE|L2 19903 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13|MC1DN23 NADH:ubiquinone oxidoreductase subunit A12 protein-coding chr3-1248 chr3 155805733 155805943 + 13.7 0.000 intron (NM_173657, intron 1 of 5) intron (NM_173657, intron 1 of 5) 440 NM_001308229 285315 Hs.350846 NM_173657 ENSG00000174928 C3orf33 AC3-33 chromosome 3 open reading frame 33 protein-coding chrX-202 chrX 135004020 135004230 + 13.7 0.000 Intergenic CpG 13134 NM_001163438 644538 Hs.42239 NM_001163438 ENSG00000184785 SMIM10 CXorf69 small integral membrane protein 10 protein-coding chr16-2437 chr16 82091392 82091602 + 13.7 0.000 intron (NM_002153, intron 4 of 4) MER67B|LTR|ERV1 56244 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chr1-3177 chr1 97906926 97907136 + 13.7 0.000 intron (NM_000110, intron 1 of 22) MER44C|DNA|TcMar-Tigger 14028 NM_001160301 1806 Hs.335034 NM_000110 ENSG00000188641 DPYD DHP|DHPDHASE|DPD dihydropyrimidine dehydrogenase protein-coding chr1-3561 chr1 248873553 248873763 + 13.7 0.000 Intergenic CpG -14573 NM_001350072 55657 Hs.377705 NM_017865 ENSG00000171163 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding chr1-4373 chr1 154324791 154325001 + 13.7 0.000 promoter-TSS (NM_001005855) promoter-TSS (NM_001005855) -629 NM_001370597 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr1-11138 chr1 234785735 234785945 + 13.7 0.000 Intergenic Intergenic -25784 NR_148962 100130249 Hs.617350 NR_148962 ENSG00000279261 PP2672 - uncharacterized LOC100130249 ncRNA chr12-5208 chr12 105618623 105618833 + 13.7 0.000 Intergenic Intergenic -85475 NR_110108 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr11-1636 chr11 79353727 79353937 + 13.7 0.000 intron (NM_001098816, intron 1 of 33) MER58A|DNA|hAT-Charlie 48277 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr8-2059 chr8 121240141 121240351 + 13.7 0.000 Intergenic Intergenic -399100 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr4-2397 chr4 74230734 74230944 + 13.7 0.000 intron (NM_001144978, intron 6 of 7) intron (NM_001144978, intron 6 of 7) 72721 NR_147097 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr5-1573 chr5 142894837 142895047 + 13.7 0.000 intron (NR_146198, intron 6 of 22) intron (NR_146198, intron 6 of 22) -26032 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr4-3055 chr4 140703589 140703799 + 13.7 0.000 intron (NM_015130, intron 1 of 20) intron (NM_015130, intron 1 of 20) 52691 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr9-2794 chr9 117808243 117808453 + 13.7 0.000 Intergenic MIRc|SINE|MIR 103945 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr8-545 chr8 144900179 144900389 + 13.7 0.000 promoter-TSS (NM_001363103) promoter-TSS (NM_001363103) 21 NM_001363103 58500 Hs.532277 NM_021061 ENSG00000196150 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding chr7-980 chr7 48088808 48089018 + 13.7 0.000 promoter-TSS (NM_001287429) promoter-TSS (NM_001287429) 310 NM_001362774 7378 Hs.488240 NM_003364 ENSG00000183696 UPP1 UDRPASE|UP|UPASE|UPP uridine phosphorylase 1 protein-coding chr18-1265 chr18 57944001 57944211 + 13.7 0.000 Intergenic L1ME4a|LINE|L1 -100120 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr1-3505 chr1 155834292 155834502 + 13.7 0.000 intron (NM_032292, intron 2 of 20) intron (NM_032292, intron 2 of 20) 22817 NM_032292 54856 Hs.656361 NM_032292 ENSG00000116580 GON4L GON-4|GON4|YARP gon-4 like protein-coding chr9-1683 chr9 86721903 86722113 + 13.7 0.000 Intergenic Intergenic 225498 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chrX-220 chrX 41355540 41355750 + 13.7 0.000 intron (NR_126093, intron 17 of 18) AluJb|SINE|Alu 21479 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr15-1200 chr15 42160336 42160546 + 13.7 0.000 3' UTR (NM_001301138, exon 26 of 26) 3' UTR (NM_001301138, exon 26 of 26) -3805 NM_213600 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr12-4458 chr12 13468098 13468308 + 13.7 0.000 Intergenic Intergenic -91458 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr5-2174 chr5 127766807 127767017 + 13.7 0.000 intron (NM_001317938, intron 3 of 6) intron (NM_001317938, intron 3 of 6) 63523 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr17-3234 chr17 18106498 18106708 + 13.7 0.000 intron (NM_001388, intron 12 of 12) intron (NM_001388, intron 12 of 12) -2153 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr1-2752 chr1 46397120 46397330 + 13.7 0.000 intron (NM_001441, intron 1 of 14) intron (NM_001441, intron 1 of 14) 2908 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr1-1445 chr1 193121891 193122101 + 13.7 0.000 promoter-TSS (NM_024529) promoter-TSS (NM_024529) 38 NM_024529 79577 Hs.378996 NM_024529 ENSG00000134371 CDC73 C1orf28|FIHP|HPTJT|HRPT1|HRPT2|HYX cell division cycle 73 protein-coding chr14-489 chr14 75822630 75822840 + 13.7 0.000 intron (NM_015072, intron 28 of 31) intron (NM_015072, intron 28 of 31) 159260 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr16-3908 chr16 80891634 80891844 + 13.7 0.000 intron (NR_131948, intron 1 of 2) intron (NR_131948, intron 1 of 2) 857 NR_131948 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA chr3-1869 chr3 124919916 124920126 + 13.7 0.000 intron (NM_033049, intron 5 of 11) intron (NM_033049, intron 5 of 11) 14730 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr19-1481 chr19 10404262 10404472 + 13.7 0.000 promoter-TSS (NR_031592) promoter-TSS (NR_031592) -825 NM_007065 11140 Hs.160958 NM_007065 ENSG00000105401 CDC37 P50CDC37 cell division cycle 37 protein-coding chr2-3117 chr2 159131870 159132080 + 13.7 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -54860 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr2-2840 chr2 121472274 121472484 + 13.7 0.000 intron (NM_015282, intron 8 of 38) L1MEa|LINE|L1 -58501 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr12-2514 chr12 91054416 91054626 + 13.7 0.000 intron (NM_007035, intron 2 of 2) intron (NM_007035, intron 2 of 2) 3833 NM_007035 11081 Hs.125750 NM_007035 ENSG00000139330 KERA CNA2|KTN|SLRR2B keratocan protein-coding chr9-3410 chr9 133650009 133650219 + 13.7 0.000 intron (NM_000787, intron 6 of 11) intron (NM_000787, intron 6 of 11) 7294 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr1-4969 chr1 54608114 54608324 + 13.7 0.000 TTS (NM_176782) TTS (NM_176782) 15306 NM_176782 338094 Hs.234786 NM_176782 ENSG00000162391 FAM151A C1orf179 family with sequence similarity 151 member A protein-coding chr9-2995 chr9 91500539 91500749 + 13.7 0.000 Intergenic MER49|LTR|ERV1 -76018 NM_001290000 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr2-3716 chr2 229407907 229408117 + 13.7 0.000 intron (NM_139072, intron 9 of 12) intron (NM_139072, intron 9 of 12) -136725 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr3-5210 chr3 76753609 76753819 + 13.7 0.000 Intergenic Intergenic -286385 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr12-2258 chr12 91528354 91528564 + 13.7 0.000 Intergenic L1ME1|LINE|L1 -345642 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr17-1457 chr17 44708619 44708829 + 13.7 0.000 promoter-TSS (NM_025104) promoter-TSS (NM_025104) 59 NR_148206 80174 Hs.369998 NM_025104 ENSG00000161692 DBF4B ASKL1|CHIFB|DRF1|ZDBF1B DBF4 zinc finger B protein-coding chr19-1977 chr19 2205460 2205670 + 13.7 0.000 intron (NM_032482, intron 9 of 27) intron (NM_032482, intron 9 of 27) 28584 NR_031596 100302283 NR_031596 ENSG00000221411 MIR1227 MIRN1227|hsa-mir-1227|mir-1227 microRNA 1227 ncRNA chr21-1171 chr21 42379490 42379700 + 13.7 0.000 intron (NM_032404, intron 7 of 9) intron (NM_032404, intron 7 of 9) 9554 NM_032404 64699 Hs.208600 NM_024022 ENSG00000160183 TMPRSS3 DFNB10|DFNB8|ECHOS1|TADG12 transmembrane serine protease 3 protein-coding chr9-1424 chr9 129671557 129671767 + 13.7 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 6015 NM_016307 51450 Hs.660115 NM_016307 ENSG00000167157 PRRX2 PMX2|PRX2 paired related homeobox 2 protein-coding chr16-2120 chr16 2588298 2588508 + 13.7 0.000 intron (NM_001261816, intron 11 of 11) intron (NM_001261816, intron 11 of 11) -14981 NR_015441 652276 Hs.720448 NR_015441 ENSG00000215154 LOC652276 - potassium channel tetramerization domain containing 5 pseudogene pseudo chr11-1639 chr11 86360958 86361168 + 13.7 0.000 Intergenic Intergenic -13673 NM_021827 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr4-5138 chr4 152831451 152831661 + 13.7 0.000 intron (NM_001025595, intron 2 of 8) L1ME3|LINE|L1 51602 NM_001025595 27236 Hs.416089 NM_014447 ENSG00000164144 ARFIP1 HSU52521 ADP ribosylation factor interacting protein 1 protein-coding chr7-3624 chr7 39602532 39602742 + 13.7 0.000 intron (NM_001282446, intron 2 of 2) intron (NM_001282446, intron 2 of 2) -20935 NM_005402 5898 Hs.6906 NM_005402 ENSG00000006451 RALA RAL RAS like proto-oncogene A protein-coding chr2-2280 chr2 28661546 28661756 + 13.7 0.000 Intergenic MER103C|DNA|hAT-Charlie 74554 NR_145832 100505774 Hs.595909 NR_145832 ENSG00000226833 LOC100505774 - uncharacterized LOC100505774 ncRNA chr8-3855 chr8 32631559 32631769 + 13.7 0.000 intron (NM_013960, intron 5 of 12) intron (NM_013960, intron 5 of 12) -15068 NM_013959 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chrX-1641 chrX 129418069 129418279 + 13.7 0.000 Intergenic Intergenic 105316 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr19-3045 chr19 1551670 1551880 + 13.7 0.000 Intergenic Intergenic 16283 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr3-3002 chr3 101216837 101217047 + 13.7 0.000 Intergenic Intergenic 103633 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr13-1208 chr13 51735132 51735342 + 13.7 0.000 intron (NM_052950, intron 6 of 11) intron (NM_052950, intron 6 of 11) 68925 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr17-1664 chr17 76460645 76460855 + 13.7 0.000 intron (NM_001166579, intron 2 of 6) intron (NM_001166579, intron 2 of 6) -6853 NR_110548 15 Hs.431417 NM_001088 ENSG00000129673 AANAT DSPS|SNAT aralkylamine N-acetyltransferase protein-coding chr3-3580 chr3 56371622 56371832 + 13.7 0.000 intron (NR_132749, intron 2 of 17) intron (NR_132749, intron 2 of 17) 96740 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr2-7091 chr2 173446296 173446506 + 13.7 0.000 Intergenic Intergenic 91529 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr19-1436 chr19 4204730 4204940 + 13.7 0.000 intron (NM_133475, intron 7 of 21) intron (NM_133475, intron 7 of 21) 21481 NM_133475 170961 Hs.197872 NM_133475 ENSG00000089847 ANKRD24 - ankyrin repeat domain 24 protein-coding chr4-2135 chr4 76856534 76856744 + 13.7 0.000 Intergenic Intergenic 41505 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr15-1355 chr15 65576656 65576866 + 13.7 0.000 3' UTR (NM_016395, exon 11 of 11) 3' UTR (NM_016395, exon 11 of 11) 34370 NR_045105 81556 Hs.6686 NM_030800 ENSG00000138614 INTS14 C15orf44|VWA9 integrator complex subunit 14 protein-coding chr5-3321 chr5 129506179 129506389 + 13.7 0.000 intron (NM_133638, intron 2 of 22) intron (NM_133638, intron 2 of 22) -45595 NR_125748 103689846 Hs.628635 NR_125748 ENSG00000249421 ADAMTS19-AS1 - ADAMTS19 antisense RNA 1 ncRNA chr13-669 chr13 99916544 99916754 + 13.7 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) 40516 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr11-1730 chr11 103700616 103700826 + 13.7 0.000 Intergenic L2b|LINE|L2 -149185 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr6-2753 chr6 112268951 112269161 + 13.7 0.000 intron (NR_121193, intron 2 of 2) intron (NR_121193, intron 2 of 2) -14341 NM_001105208 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr7-1184 chr7 42434449 42434659 + 13.7 0.000 Intergenic AluY|SINE|Alu -197345 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr1-2430 chr1 8463420 8463630 + 13.7 0.000 intron (NM_001042681, intron 11 of 22) intron (NM_001042681, intron 11 of 22) 31388 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr14-1164 chr14 51884376 51884586 + 13.7 0.000 intron (NM_001243773, intron 2 of 3) MIRb|SINE|MIR 23869 NM_053064 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr8-1804 chr8 107444225 107444435 + 13.7 0.000 intron (NM_001199859, intron 1 of 8) intron (NM_001199859, intron 1 of 8) 53588 NM_001199859 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr20-1290 chr20 51128396 51128606 + 13.7 0.000 Intergenic Intergenic -105394 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr4-1032 chr4 26015393 26015603 + 13.7 0.000 Intergenic Intergenic 101306 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr11-1675 chr11 19432566 19432776 + 13.7 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 74558 NR_049725 100874012 Hs.434602 NR_049725 ENSG00000255043 NAV2-AS5 - NAV2 antisense RNA 5 ncRNA chr12-1003 chr12 131829182 131829392 + 13.7 0.000 intron (NM_016155, intron 1 of 9) CpG 894 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr14-1814 chr14 41801638 41801848 + 13.7 0.000 intron (NM_001330106, intron 2 of 4) MER117|DNA|hAT-Charlie 194887 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-3240 chr1 198258485 198258695 + 13.7 0.000 intron (NM_133494, intron 3 of 9) intron (NM_133494, intron 3 of 9) 101592 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr6-6017 chr6 111461977 111462187 + 13.7 0.000 intron (NM_001286431, intron 3 of 34) intron (NM_001286431, intron 3 of 34) -21390 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr3-4335 chr3 178205894 178206104 + 13.7 0.000 Intergenic LTR80A|LTR|ERVL -213202 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr15-2003 chr15 44034150 44034360 + 13.7 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) -156084 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr10-2228 chr10 74079838 74080048 + 13.7 0.000 intron (NM_014000, intron 6 of 21) intron (NM_014000, intron 6 of 21) 70885 NR_135191 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr9-1202 chr9 122375157 122375367 + 13.7 0.000 promoter-TSS (NM_001271165) promoter-TSS (NM_001271165) -40 NM_001271165 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr2-3968 chr2 71379343 71379553 + 13.7 0.000 intron (NM_001252613, intron 8 of 27) Tigger7|DNA|TcMar-Tigger 47666 NM_014497 27332 Hs.434401 NM_014497 ENSG00000075292 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding chr2-3176 chr2 206713786 206713996 + 13.7 0.000 intron (NM_001093730, intron 1 of 11) intron (NM_001093730, intron 1 of 11) 4505 NM_001093730 391475 Hs.640667 NM_001093730 ENSG00000232125 DYTN - dystrotelin protein-coding chr11-1464 chr11 88174734 88174944 + 13.7 0.000 intron (NM_022337, intron 1 of 2) intron (NM_022337, intron 1 of 2) 604 NM_022337 23682 Hs.591975 NM_022337 ENSG00000123892 RAB38 NY-MEL-1|rrGTPbp RAB38, member RAS oncogene family protein-coding chr2-2323 chr2 120820885 120821095 + 13.7 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 28709 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr11-4704 chr11 66396626 66396836 + 13.7 0.000 Intergenic Intergenic -24255 NM_001300868 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr4-1500 chr4 48726284 48726494 + 13.7 0.000 intron (NM_015030, intron 1 of 63) intron (NM_015030, intron 1 of 63) 53910 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chr13-1415 chr13 33312375 33312585 + 13.7 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) 22786 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr1-3957 chr1 115330583 115330793 + 13.7 0.000 intron (NM_002506, intron 1 of 2) intron (NM_002506, intron 1 of 2) 7548 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr9-2142 chr9 114621931 114622141 + 13.7 0.000 intron (NM_153045, intron 2 of 8) L2c|LINE|L2 10745 NM_001330760 203197 Hs.522357 NM_153045 ENSG00000157693 TMEM268 C9orf91 transmembrane protein 268 protein-coding chrX-245 chrX 49155931 49156141 + 13.7 0.000 Intergenic Intergenic -6807 NM_001099682 79917 Hs.193170 NM_024859 ENSG00000269313 MAGIX JM10|PDZX MAGI family member, X-linked protein-coding KI270746.1-1 KI270746.1 28376 28586 + 13.7 0.000 NA NA NA NA chr4-1758 chr4 146567588 146567798 + 13.7 0.000 Intergenic Intergenic -45722 NM_001317817 84068 Hs.659209 NM_032128 ENSG00000120519 SLC10A7 C4orf13|P7|SSASKS solute carrier family 10 member 7 protein-coding chr15-3399 chr15 89105185 89105395 + 13.7 0.000 intron (NM_007011, intron 5 of 14) intron (NM_007011, intron 5 of 14) 16834 NM_152924 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr3-1814 chr3 49405672 49405882 + 13.7 0.000 intron (NM_001664, intron 1 of 4) AluSx1|SINE|Alu 6199 NM_001313946 387 Hs.247077 NM_001664 ENSG00000067560 RHOA ARH12|ARHA|RHO12|RHOH12 ras homolog family member A protein-coding chr22-1284 chr22 36465084 36465294 + 13.7 0.000 Intergenic Intergenic 16451 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr3-5888 chr3 37956377 37956587 + 13.7 0.000 intron (NM_005808, intron 2 of 6) intron (NM_005808, intron 2 of 6) -12922 NR_029499 407015 NR_029499 ENSG00000199075 MIR26A1 MIR26A|MIRN26A1|mir-26a-1 microRNA 26a-1 ncRNA chr17-3156 chr17 60469758 60469968 + 13.7 0.000 intron (NM_006380, intron 4 of 12) L1MB4|LINE|L1 47374 NM_181707 124773 Hs.129312 NM_181707 ENSG00000141371 C17orf64 - chromosome 17 open reading frame 64 protein-coding chr2-7885 chr2 54332712 54332922 + 13.7 0.000 intron (NM_001369403, intron 1 of 3) intron (NM_001369403, intron 1 of 3) 1933 NM_001369401 129852 Hs.732626 NM_173486 ENSG00000177994 C2orf73 - chromosome 2 open reading frame 73 protein-coding chr5-2182 chr5 136770070 136770280 + 13.7 0.000 Intergenic Intergenic -358022 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr7-2879 chr7 122143233 122143443 + 13.7 0.000 intron (NM_005763, intron 1 of 23) (TC)n|Simple_repeat|Simple_repeat 911 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr7-901 chr7 55081603 55081813 + 13.7 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -28131 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr15-1517 chr15 58060962 58061172 + 13.7 0.000 intron (NM_001206897, intron 1 of 13) intron (NM_001206897, intron 1 of 13) -4158 NR_147215 283665 Hs.638961 NR_147215 LOC283665 - uncharacterized LOC283665 ncRNA chr20-565 chr20 3227656 3227866 + 13.7 0.000 TTS (NM_001324240) TTS (NM_001324240) 9966 NM_032034 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr3-1554 chr3 197394921 197395131 + 13.7 0.000 Intergenic Intergenic -95705 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr10-3412 chr10 32333531 32333741 + 13.7 0.000 intron (NM_001282391, intron 1 of 13) MLT1F-int|LTR|ERVL-MaLR 13522 NM_001272004 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr7-2288 chr7 44738246 44738456 + 13.7 0.000 Intergenic Intergenic -10215 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr3-3056 chr3 127029219 127029429 + 13.7 0.000 intron (NM_032242, intron 25 of 30) intron (NM_032242, intron 25 of 30) 40730 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr3-4937 chr3 3298514 3298724 + 13.7 0.000 Intergenic Intergenic -118902 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr2-1589 chr2 96305475 96305685 + 13.7 0.000 promoter-TSS (NM_014014) promoter-TSS (NM_014014) -34 NM_014014 23020 Hs.246112 NM_014014 ENSG00000144028 SNRNP200 ASCC3L1|BRR2|HELIC2|RP33|U5-200KD small nuclear ribonucleoprotein U5 subunit 200 protein-coding chr12-1656 chr12 49367851 49368061 + 13.7 0.000 intron (NM_001293286, intron 1 of 12) intron (NM_001293286, intron 1 of 12) 1051 NM_001293285 65244 Hs.654826 NM_023071 ENSG00000123352 SPATS2 Nbla00526|P59SCR|SCR59|SPATA10 spermatogenesis associated serine rich 2 protein-coding chr2-1348 chr2 202238577 202238787 + 13.7 0.000 promoter-TSS (NM_001005782) promoter-TSS (NM_001005782) -85 NM_001371392 chr1-1117 chr1 32901255 32901465 + 13.7 0.000 promoter-TSS (NM_033504) promoter-TSS (NM_033504) 29 NM_001329722 113452 Hs.534521 NM_033504 ENSG00000121900 TMEM54 BCLP|CAC-1|CAC1 transmembrane protein 54 protein-coding chr22-1166 chr22 23647783 23647993 + 13.7 0.000 intron (NR_024448, intron 11 of 11) AluJr|SINE|Alu -15567 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr19-2638 chr19 5368954 5369164 + 13.7 0.000 Intergenic L2|LINE|L2 -28247 NM_130854 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr22-1465 chr22 50348444 50348654 + 13.7 0.000 intron (NM_001242899, intron 1 of 22) intron (NM_001242899, intron 1 of 22) 5222 NM_001242898 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr6-3603 chr6 96255843 96256053 + 13.7 0.000 Intergenic Intergenic 239974 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr13-823 chr13 43153739 43153949 + 13.7 0.000 intron (NR_047013, intron 1 of 2) intron (NR_047013, intron 1 of 2) 40679 NR_047013 100874159 Hs.633241 NR_047013 LINC00400 - long intergenic non-protein coding RNA 400 ncRNA chr20-798 chr20 64049908 64050118 + 13.7 0.000 promoter-TSS (NM_018419) promoter-TSS (NM_018419) -374 NM_018419 54345 Hs.8619 NM_018419 ENSG00000203883 SOX18 HLTRS|HLTS SRY-box transcription factor 18 protein-coding chr1-3926 chr1 87968026 87968236 + 13.7 0.000 Intergenic Intergenic -596476 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr11-5244 chr11 26974169 26974379 + 13.7 0.000 Intergenic Intergenic -19838 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr11-3276 chr11 77618129 77618339 + 13.7 0.000 TTS (NM_001311199) TTS (NM_001311199) 19560 NM_001311200 1207 Hs.430733 NM_001293 ENSG00000074201 CLNS1A CLCI|CLNS1B|ICln chloride nucleotide-sensitive channel 1A protein-coding chr14-2482 chr14 98357339 98357549 + 13.7 0.000 Intergenic Intergenic -354169 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr2-1678 chr2 109217430 109217640 + 13.7 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -75947 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr5-2752 chr5 141889355 141889565 + 13.7 0.000 Intergenic MER31-int|LTR|ERV1 7235 NR_033244 729080 Hs.730564 NR_033244 LOC729080 - glycine cleavage system protein H (aminomethyl carrier) pseudogene pseudo chr17-1146 chr17 81087255 81087465 + 13.7 0.000 intron (NM_001144888, intron 6 of 13) intron (NM_001144888, intron 6 of 13) 38013 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr2-1684 chr2 127050325 127050535 + 13.7 0.000 exon (NM_139351, exon 12 of 13) exon (NM_139351, exon 12 of 13) 31635 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr17-2490 chr17 77916264 77916474 + 13.7 0.000 Intergenic Intergenic -32282 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr8-1059 chr8 37821633 37821843 + 13.7 0.000 intron (NM_032777, intron 2 of 18) intron (NM_032777, intron 2 of 18) 24855 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr1-3611 chr1 34208378 34208588 + 13.7 0.000 intron (NM_032884, intron 5 of 6) MIR|SINE|MIR 31576 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr11-4667 chr11 58394233 58394443 + 13.7 0.000 Intergenic Intergenic 9071 NM_001005469 441608 Hs.553826 NM_001005469 ENSG00000172769 OR5B3 OR11-239|OR5B13|OST129 olfactory receptor family 5 subfamily B member 3 protein-coding chr1-2914 chr1 22345245 22345455 + 13.7 0.000 Intergenic Intergenic 79111 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr2-2907 chr2 228681499 228681709 + 13.7 0.000 Intergenic Intergenic -70209 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr20-1429 chr20 38649429 38649639 + 13.7 0.000 intron (NM_001164431, intron 14 of 14) LTR16A1|LTR|ERVL 47725 NM_001164431 343578 NM_001164431 ENSG00000124143 ARHGAP40 C20orf95|dJ1100H13.4 Rho GTPase activating protein 40 protein-coding chr3-3677 chr3 150005993 150006203 + 13.7 0.000 Intergenic Intergenic -22732 NM_001079809 653659 Hs.652908 NM_001079809 TMEM183B C1ORF37DUP|C1orf37-DUP transmembrane protein 183B protein-coding chr10-1262 chr10 124200195 124200405 + 13.7 0.000 Intergenic Intergenic -106702 NM_001270764 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr6-3093 chr6 86035118 86035328 + 13.7 0.000 Intergenic L1PA7|LINE|L1 -356490 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr2-3457 chr2 127081429 127081639 + 13.7 0.000 intron (NM_001320633, intron 1 of 14) intron (NM_001320633, intron 1 of 14) 531 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr17-5447 chr17 39561179 39561389 + 13.7 0.000 Intergenic Intergenic 46636 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr1-4026 chr1 186237009 186237219 + 13.7 0.000 Intergenic Intergenic -59159 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr1-3856 chr1 38622404 38622614 + 13.7 0.000 Intergenic Intergenic 147313 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr12-1181 chr12 61993881 61994091 + 13.7 0.000 intron (NM_178539, intron 1 of 4) intron (NM_178539, intron 1 of 4) 198853 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr10-1470 chr10 102962385 102962595 + 13.7 0.000 intron (NM_199076, intron 1 of 6) L1ME4a|LINE|L1 -44155 NR_160733 107984265 NR_160733 LOC107984265 - uncharacterized LOC107984265 ncRNA chr11-2446 chr11 35031907 35032117 + 13.7 0.000 Intergenic Intergenic 90175 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr12-2513 chr12 90615220 90615430 + 13.7 0.000 Intergenic L1P2|LINE|L1 -302698 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr20-1016 chr20 6636464 6636674 + 13.7 0.000 Intergenic Intergenic 99567 NR_146909 105372516 Hs.580741 NR_146909 LINC01713 - long intergenic non-protein coding RNA 1713 ncRNA chr5-615 chr5 65925707 65925917 + 13.7 0.000 promoter-TSS (NM_001253698) promoter-TSS (NM_001253698) -742 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr6-1708 chr6 26537418 26537628 + 13.7 0.000 promoter-TSS (NM_006353) promoter-TSS (NM_006353) -843 NM_006353 10473 Hs.236774 NM_006353 ENSG00000182952 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding chr5-2527 chr5 164614897 164615107 + 13.7 0.000 Intergenic L2c|LINE|L2 144723 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr1-10046 chr1 90210320 90210530 + 13.7 0.000 Intergenic Intergenic 215315 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr9-1570 chr9 34560308 34560518 + 13.7 0.000 intron (NM_001207011, intron 4 of 9) intron (NM_001207011, intron 4 of 9) -7599 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr1-2139 chr1 1248096 1248306 + 13.7 0.000 Intergenic Intergenic -1479 NM_001014980 388581 Hs.197613 NM_001014980 ENSG00000184163 C1QTNF12 C1QDC2|CTRP12|FAM132A C1q and TNF related 12 protein-coding chr5-2163 chr5 110785301 110785511 + 13.7 0.000 Intergenic Intergenic 46399 NM_138773 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding chr4-539 chr4 56977453 56977663 + 13.7 0.000 promoter-TSS (NM_032313) promoter-TSS (NM_032313) 48 NM_032313 84273 Hs.8715 NM_032313 ENSG00000084092 NOA1 C4orf14|MTG3|hAtNOS1|hNOA1|mAtNOS1 nitric oxide associated 1 protein-coding chr7-3861 chr7 102872715 102872925 + 13.7 0.000 intron (NR_105043, intron 17 of 20) intron (NR_105043, intron 17 of 20) -40180 NM_001031692 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr3-1762 chr3 188656742 188656952 + 13.7 0.000 intron (NM_005578, intron 6 of 10) MIRb|SINE|MIR -31934 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr1-5015 chr1 71050005 71050215 + 13.7 0.000 intron (NR_038420, intron 2 of 2) intron (NR_038420, intron 2 of 2) -2294 NM_198714 5733 Hs.445000 NM_000957 ENSG00000050628 PTGER3 EP3|EP3-I|EP3-II|EP3-III|EP3-IV|EP3-VI|EP3e|PGE2-R prostaglandin E receptor 3 protein-coding chr1-4736 chr1 4942029 4942239 + 13.7 0.000 Intergenic Intergenic 287525 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr3-5012 chr3 25234873 25235083 + 13.7 0.000 intron (NM_001290216, intron 4 of 10) intron (NM_001290216, intron 4 of 10) -105824 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr2-691 chr2 118014179 118014389 + 13.7 0.000 promoter-TSS (NM_019044) promoter-TSS (NM_019044) -214 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr17-2823 chr17 16420108 16420318 + 13.7 0.000 exon (NM_016113, exon 3 of 15) exon (NM_016113, exon 3 of 15) 4642 NM_016113 51393 Hs.279746 NM_016113 ENSG00000187688 TRPV2 VRL|VRL-1|VRL1 transient receptor potential cation channel subfamily V member 2 protein-coding chr17-2304 chr17 42431932 42432142 + 13.7 0.000 Intergenic MER92B|LTR|ERV1 -8781 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 CAVIN1 CAVIN|CGL4|FKSG13|PTRF|cavin-1 caveolae associated protein 1 protein-coding chr18-777 chr18 24569531 24569741 + 13.7 0.000 Intergenic MIR|SINE|MIR -58546 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr7-1835 chr7 131830155 131830365 + 13.7 0.000 Intergenic Intergenic -79960 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr20-1168 chr20 63592172 63592382 + 13.7 0.000 intron (NM_012384, intron 8 of 9) intron (NM_012384, intron 8 of 9) -18038 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr10-1604 chr10 44978891 44979101 + 13.7 0.000 promoter-TSS (NM_007021) promoter-TSS (NM_007021) -187 NM_007021 11067 Hs.93675 NM_007021 ENSG00000165507 DEPP1 C10orf10|DEPP|FIG|Fseg DEPP1 autophagy regulator protein-coding chr4-3767 chr4 92464788 92464998 + 13.7 0.000 intron (NM_001286838, intron 1 of 14) MSTA|LTR|ERVL-MaLR 160494 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr2-1871 chr2 31270221 31270431 + 13.7 0.000 TTS (NM_014600) TTS (NM_014600) 36174 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding chr11-3336 chr11 117413522 117413732 + 13.7 0.000 TTS (NM_014956) TTS (NM_014956) 85773 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr2-3019 chr2 60806869 60807079 + 13.7 0.000 Intergenic Intergenic 50706 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr9-1669 chr9 37480575 37480785 + 13.7 0.000 Intergenic L1PA13|LINE|L1 -5255 NM_001282766 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr1-3996 chr1 159923802 159924012 + 13.7 0.000 promoter-TSS (NM_001277224) promoter-TSS (NM_001277224) -173 NM_001277224 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr9-6214 chr9 104367782 104367992 + 13.7 0.000 Intergenic Intergenic 97658 NR_135141 105376194 Hs.553289 NR_135141 LOC105376194 - uncharacterized LOC105376194 ncRNA chr1-3089 chr1 30887780 30887990 + 13.7 0.000 intron (NM_014654, intron 1 of 4) MIR3|SINE|MIR 20873 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr14-700 chr14 68863293 68863503 + 13.7 0.000 Intergenic Intergenic -67155 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr1-3138 chr1 59128398 59128608 + 13.7 0.000 Intergenic MIRb|SINE|MIR 18304 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr2-2139 chr2 121095320 121095530 + 13.7 0.000 Intergenic Intergenic 189777 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr1-4039 chr1 201513140 201513350 + 13.7 0.000 intron (NR_160747, intron 1 of 1) MER41A|LTR|ERV1 6032 NR_160747 107985246 NR_160746 LOC107985246 - uncharacterized LOC107985246 ncRNA chr3-3416 chr3 99843701 99843911 + 13.7 0.000 intron (NM_001282794, intron 2 of 2) MER1B|DNA|hAT-Charlie -19941 NR_110821 101929357 Hs.741615 NR_110821 HP09053 - uncharacterized LOC101929357 ncRNA chr8-1327 chr8 23370746 23370956 + 13.7 0.000 intron (NM_002318, intron 1 of 13) L1MEg|LINE|L1 33269 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr9-2755 chr9 100516104 100516314 + 13.7 0.000 intron (NM_001198812, intron 4 of 9) intron (NM_001198812, intron 4 of 9) 43060 NM_003692 8577 Hs.598100 NM_003692 ENSG00000241697 TMEFF1 C9orf2|CT120.1|H7365|TR-1 transmembrane protein with EGF like and two follistatin like domains 1 protein-coding chr7-1530 chr7 91239333 91239543 + 13.7 0.000 Intergenic LTR16A1|LTR|ERVL -24995 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr5-2160 chr5 106314448 106314658 + 13.7 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 696461 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr7-2847 chr7 104961053 104961263 + 13.7 0.000 Intergenic Intergenic 30007 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr5-523 chr5 172187983 172188193 + 13.7 0.000 5' UTR (NM_005990, exon 1 of 19) 5' UTR (NM_005990, exon 1 of 19) 136 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr1-3472 chr1 52111598 52111808 + 13.7 0.000 Intergenic L2b|LINE|L2 -30386 NM_007324 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr16-3500 chr16 11516036 11516246 + 13.7 0.000 intron (NM_001370704, intron 5 of 66) intron (NM_001370704, intron 5 of 66) 11106 NM_001370704 400499 Hs.459937 NM_001370704 ENSG00000188897 LOC400499 - putative uncharacterized protein LOC400499 protein-coding chr10-2153 chr10 91536907 91537117 + 13.7 0.000 intron (NR_024467, intron 2 of 4) intron (NR_024467, intron 2 of 4) 74448 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr14-1739 chr14 60623193 60623403 + 13.7 0.000 Intergenic Intergenic -15918 NR_126480 104548971 NR_126480 SALRNA1 SAL-RNA1|XLOC_023166 senescence associated long non-coding RNA 1 ncRNA chr12-1433 chr12 68320085 68320295 + 13.7 0.000 intron (NM_001368282, intron 6 of 13) intron (NM_001368282, intron 6 of 13) 12172 NM_020128 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr1-8163 chr1 16368310 16368520 + 13.7 0.000 intron (NR_073500, intron 1 of 1) intron (NR_073500, intron 1 of 1) 1173 NR_073501 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr21-322 chr21 35366617 35366827 + 13.7 0.000 Intergenic Intergenic 214042 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr17-2226 chr17 805057 805267 + 13.7 0.000 exon (NM_022463, exon 6 of 8) exon (NM_022463, exon 6 of 8) 22809 NM_001317947 55178 Hs.182729 NM_018146 ENSG00000171861 MRM3 RMTL1|RNMTL1 mitochondrial rRNA methyltransferase 3 protein-coding chr17-5096 chr17 4643710 4643920 + 13.7 0.000 Intergenic L1ME4b|LINE|L1 -2137 NM_001140 246 Hs.73809 NM_001140 ENSG00000161905 ALOX15 12-LOX|15-LOX|15-LOX-1|LOG15 arachidonate 15-lipoxygenase protein-coding chr11-2215 chr11 64005645 64005855 + 13.7 0.000 intron (NM_014067, intron 4 of 10) intron (NM_014067, intron 4 of 10) 19897 NM_017670 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr16-2735 chr16 228386 228596 + 13.7 0.000 intron (NM_001330420, intron 1 of 9) intron (NM_001330420, intron 1 of 9) 958 NM_018032 55692 Hs.16803 NM_018032 ENSG00000007392 LUC7L LUC7B1|Luc7|SR+89|hLuc7B1 LUC7 like protein-coding chr8-2379 chr8 43124899 43125109 + 13.7 0.000 Intergenic LTR76|LTR|ERV1 -15460 NM_001363229 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr9-1341 chr9 115730417 115730627 + 13.7 0.000 Intergenic Intergenic 13717 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr9-2726 chr9 92748064 92748274 + 13.7 0.000 intron (NM_001003800, intron 1 of 6) intron (NM_001003800, intron 1 of 6) 16664 NM_001003800 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chr1-11013 chr1 220527498 220527708 + 13.7 0.000 promoter-TSS (NM_001286129) promoter-TSS (NM_001286129) -533 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr20-794 chr20 62590655 62590865 + 13.7 0.000 Intergenic Intergenic 25848 NR_029676 406923 NR_029676 ENSG00000284508 MIR133A2 MIRN133A2|mir-133a-2 microRNA 133a-2 ncRNA chr1-8263 chr1 35001759 35001969 + 13.7 0.000 intron (NM_007167, intron 14 of 15) intron (NM_007167, intron 14 of 15) -16517 NM_001195156 100506144 Hs.533986 NM_001195156 ENSG00000243749 TMEM35B ZMYM6NB transmembrane protein 35B protein-coding chr5-2588 chr5 81147779 81147989 + 13.7 0.000 intron (NM_006909, intron 17 of 26) intron (NM_006909, intron 17 of 26) -85436 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr2-2754 chr2 191976482 191976692 + 13.7 0.000 intron (NM_001305134, intron 7 of 9) intron (NM_001305134, intron 7 of 9) -129499 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr5-1920 chr5 176709915 176710125 + 13.7 0.000 Intergenic Intergenic -33185 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr21-774 chr21 44767825 44768035 + 13.7 0.000 TTS (NM_001202489) TTS (NM_001202489) 33890 NM_001202489 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding chr11-2218 chr11 64699103 64699313 + 13.7 0.000 intron (NM_015080, intron 2 of 22) intron (NM_015080, intron 2 of 22) 23980 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr8-1529 chr8 92101309 92101519 + 13.7 0.000 intron (NM_175634, intron 1 of 11) intron (NM_175634, intron 1 of 11) -1726 NM_001198628 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr11-1737 chr11 111541151 111541361 + 13.7 0.000 intron (NM_178834, intron 1 of 6) CpG 748 NM_001258390 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr17-891 chr17 43778420 43778630 + 13.7 0.000 intron (NM_004090, intron 1 of 2) CpG 452 NM_004090 1845 Hs.181046 NM_004090 ENSG00000108861 DUSP3 VHR dual specificity phosphatase 3 protein-coding chr20-1822 chr20 63545859 63546069 + 13.7 0.000 intron (NM_080823, intron 1 of 7) intron (NM_080823, intron 1 of 7) 1540 NM_080823 6725 NM_080823 ENSG00000125508 SRMS C20orf148|PTK70|SRM|dJ697K14.1 src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites protein-coding chr9-2822 chr9 125218594 125218804 + 13.7 0.000 intron (NM_001174152, intron 5 of 8) intron (NM_001174152, intron 5 of 8) 18157 NM_005833 10244 Hs.19012 NM_005833 ENSG00000136933 RABEPK RAB9P40|bA65N13.1|p40 Rab9 effector protein with kelch motifs protein-coding chrX-2086 chrX 22220767 22220977 + 13.7 0.000 intron (NM_001282754, intron 17 of 20) intron (NM_001282754, intron 17 of 20) -47889 NR_046639 100873942 Hs.633194 NR_046639 ENSG00000224204 PHEX-AS1 - PHEX antisense RNA 1 ncRNA chr15-3441 chr15 91058184 91058394 + 13.7 0.000 Intergenic UCON74|DNA?|DNA? 35667 NR_110104 101926911 Hs.459366 NR_110104 ENSG00000214432 VPS33B-DT - VPS33B divergent transcript ncRNA chr4-1600 chr4 33924329 33924539 + 13.7 0.000 intron (NR_125902, intron 4 of 4) MER61D|LTR|ERV1 115459 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr13-397 chr13 60618248 60618458 + 13.7 0.000 Intergenic LTR55|LTR|ERVL? -54602 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr5-4470 chr5 7897134 7897344 + 13.7 0.000 exon (NM_001364442, exon 14 of 15) exon (NM_001364442, exon 14 of 15) 28091 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr2-3905 chr2 47075242 47075452 + 13.7 0.000 3' UTR (NM_001288955, exon 19 of 19) 3' UTR (NM_001288955, exon 19 of 19) 79961 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr8-2588 chr8 48590078 48590288 + 13.7 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) -30220 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA chr2-3190 chr2 215994876 215995086 + 13.7 0.000 intron (NM_018000, intron 2 of 4) intron (NM_018000, intron 2 of 4) 18570 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr13-600 chr13 46586740 46586950 + 13.7 0.000 intron (NM_001164213, intron 1 of 18) intron (NM_001164213, intron 1 of 18) 33675 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr8-2446 chr8 118089840 118090050 + 13.7 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 21874 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr16-1659 chr16 56912212 56912422 + 13.7 0.000 intron (NM_001126108, intron 25 of 25) intron (NM_001126108, intron 25 of 25) 8053 NR_106923 102466752 NR_106923 ENSG00000283471 MIR6863 hsa-mir-6863 microRNA 6863 ncRNA chr2-1970 chr2 17753320 17753530 + 13.7 0.000 promoter-TSS (NM_001130009) promoter-TSS (NM_001130009) 385 NM_001142286 79677 Hs.526728 NM_024624 ENSG00000163029 SMC6 SMC-6|SMC6L1|hSMC6 structural maintenance of chromosomes 6 protein-coding chr5-2275 chr5 37435377 37435587 + 13.7 0.000 intron (NM_001345998, intron 5 of 17) Tigger19b|DNA|TcMar-Tigger 56164 NM_001345999 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr17-1067 chr17 80080122 80080332 + 13.7 0.000 intron (NM_017950, intron 10 of 19) intron (NM_017950, intron 10 of 19) -18601 NR_039607 100616121 NR_039607 ENSG00000265561 MIR1268B - microRNA 1268b ncRNA chr9-5993 chr9 134804815 134805025 + 13.7 0.000 intron (NM_001278074, intron 39 of 65) intron (NM_001278074, intron 39 of 65) 44449 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr5-1506 chr5 138180369 138180579 + 13.7 0.000 intron (NM_005733, intron 2 of 18) MER20|DNA|hAT-Charlie 1362 NM_005733 10112 Hs.718626 NM_005733 ENSG00000112984 KIF20A MKLP2|RAB6KIFL kinesin family member 20A protein-coding chr6-2587 chr6 77870060 77870270 + 13.7 0.000 intron (NM_001282136, intron 4 of 4) MER47B|DNA|TcMar-Tigger 217126 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr5-2468 chr5 139061356 139061566 + 13.7 0.000 intron (NM_022464, intron 3 of 9) intron (NM_022464, intron 3 of 9) 136907 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr9-1046 chr9 136152633 136152843 + 13.7 0.000 Intergenic Intergenic -33863 NM_152833 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr13-1487 chr13 110337750 110337960 + 13.7 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) -3103 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr2-2233 chr2 197697680 197697890 + 13.7 0.000 Intergenic L1M2|LINE|L1 -7584 NM_138395 92935 Hs.744330 NM_138395 ENSG00000247626 MARS2 COXPD25|MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding chr14-932 chr14 20986876 20987086 + 13.7 0.000 Intergenic Intergenic -2999 NM_001029991 64745 Hs.512693 NM_022734 ENSG00000165792 METTL17 METT11D1 methyltransferase like 17 protein-coding chr18-768 chr18 21412698 21412908 + 13.7 0.000 intron (NM_001142966, intron 7 of 32) L1ME3B|LINE|L1 170561 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr1-4020 chr1 182974820 182975030 + 13.7 0.000 Intergenic L2a|LINE|L2 -21759 NM_030933 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr1-1695 chr1 231422358 231422568 + 13.7 0.000 5' UTR (NM_022051, exon 1 of 5) 5' UTR (NM_022051, exon 1 of 5) 2581 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr17-1826 chr17 6677580 6677790 + 13.7 0.000 Intergenic Intergenic 19966 NR_045985 100652883 Hs.549540 NR_045985 ALOX15P1 ALOX15P arachidonate 15-lipoxygenase pseudogene 1 pseudo chr11-2372 chr11 131888456 131888666 + 13.7 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -21363 NM_001352009 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr3-4871 chr3 169899775 169899985 + 13.7 0.000 Intergenic MIRb|SINE|MIR -11692 NM_182610 344658 Hs.439922 NM_182610 ENSG00000187033 SAMD7 - sterile alpha motif domain containing 7 protein-coding chr8-2809 chr8 124367724 124367934 + 13.7 0.000 intron (NM_194291, intron 1 of 6) intron (NM_194291, intron 1 of 6) 4870 NM_194291 157378 Hs.100691 NM_194291 ENSG00000164983 TMEM65 - transmembrane protein 65 protein-coding chr9-2505 chr9 104248047 104248257 + 13.7 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -22077 NR_135141 105376194 Hs.553289 NR_135141 LOC105376194 - uncharacterized LOC105376194 ncRNA chr17-1171 chr17 42248629 42248839 + 13.7 0.000 intron (NM_012448, intron 1 of 18) intron (NM_012448, intron 1 of 18) 27672 NM_012448 6777 Hs.595276 NM_012448 ENSG00000173757 STAT5B STAT5 signal transducer and activator of transcription 5B protein-coding chr12-1745 chr12 56029104 56029314 + 13.7 0.000 intron (NM_001351091, intron 6 of 8) intron (NM_001351091, intron 6 of 8) -4118 NR_135023 105369781 Hs.670395 NR_135023 LOC105369781 - uncharacterized LOC105369781 ncRNA chr6-990 chr6 2556596 2556806 + 13.7 0.000 Intergenic Intergenic -77799 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr13-1226 chr13 78264544 78264754 + 13.7 0.000 intron (NR_047001, intron 2 of 5) intron (NR_047001, intron 2 of 5) 209794 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr19-1048 chr19 49593396 49593606 + 13.7 0.000 intron (NM_020719, intron 2 of 13) CpG 2319 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding chr1-3198 chr1 151542665 151542875 + 13.7 0.000 intron (NM_001126337, intron 1 of 11) intron (NM_001126337, intron 1 of 11) 2461 NM_020127 7286 Hs.489922 NM_020127 ENSG00000143367 TUFT1 - tuftelin 1 protein-coding chr5-1841 chr5 107565090 107565300 + 13.7 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 105742 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr9-3079 chr9 15342144 15342354 + 13.7 0.000 Intergenic Intergenic -34889 NM_001168340 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr4-4220 chr4 15870406 15870616 + 13.7 0.000 Intergenic LTR9|LTR|ERV1 68229 NM_005130 9982 Hs.1690 NM_005130 ENSG00000137440 FGFBP1 FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17 fibroblast growth factor binding protein 1 protein-coding chr4-1035 chr4 26857596 26857806 + 13.7 0.000 Intergenic CpG 2543 NR_134675 105374546 Hs.548859 NR_134673 STIM2-AS1 - STIM2 antisense RNA 1 ncRNA chr21-358 chr21 28540723 28540933 + 13.7 0.000 TTS (NR_026553) TTS (NR_026553) 1510 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr2-2160 chr2 220364941 220365151 + 13.7 0.000 Intergenic (TCTCC)n|Simple_repeat|Simple_repeat -458481 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr13-1136 chr13 29435569 29435779 + 13.7 0.000 intron (NM_015233, intron 1 of 8) intron (NM_015233, intron 1 of 8) 7014 NM_015233 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr1-5658 chr1 29691925 29692135 + 13.7 0.000 Intergenic L1MCc|LINE|L1 -341916 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr16-1131 chr16 69417648 69417858 + 13.7 0.000 Intergenic Intergenic -6842 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr4-1949 chr4 117067562 117067772 + 13.7 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 17909 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr2-551 chr2 147844243 147844453 + 13.7 0.000 promoter-TSS (NM_001616) promoter-TSS (NM_001616) -169 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr22-850 chr22 17558541 17558751 + 13.7 0.000 TTS (NM_001290047) TTS (NM_001290047) -4793 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr1-6866 chr1 112247530 112247740 + 13.7 0.000 Intergenic Intergenic -148579 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr7-3816 chr7 96199489 96199699 + 13.7 0.000 intron (NM_001160210, intron 5 of 17) intron (NM_001160210, intron 5 of 17) 20162 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr11-5863 chr11 10275060 10275270 + 13.7 0.000 intron (NM_030962, intron 1 of 39) intron (NM_030962, intron 1 of 39) 19042 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr1-4191 chr1 54403965 54404175 + 13.7 0.000 intron (NM_001009955, intron 3 of 16) intron (NM_001009955, intron 3 of 16) 2324 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr8-1495 chr8 48428652 48428862 + 13.7 0.000 Intergenic Intergenic -122810 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr5-2696 chr5 75988526 75988736 + 13.7 0.000 Intergenic MER76|LTR|ERVL -94752 NM_001297716 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr12-3835 chr12 91250542 91250752 + 13.7 0.000 Intergenic Intergenic -67830 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr17-3517 chr17 64147391 64147601 + 13.7 0.000 3' UTR (NM_001288733, exon 12 of 12) 3' UTR (NM_001288733, exon 12 of 12) 1157 NR_002995 677842 Hs.405444 NR_002995 ENSG00000277887 SNORA50C ACA62|SNORA76|SNORA76C small nucleolar RNA, H/ACA box 50C snoRNA chr2-2744 chr2 172442139 172442349 + 13.7 0.000 intron (NM_001365530, intron 1 of 25) intron (NM_001365530, intron 1 of 25) 14658 NM_001365530 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr3-3613 chr3 87413841 87414051 + 13.7 0.000 Intergenic Intergenic -137362 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr16-2395 chr16 68660158 68660368 + 13.7 0.000 intron (NM_001793, intron 2 of 15) intron (NM_001793, intron 2 of 15) 14953 NM_001317195 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr3-1858 chr3 113947524 113947734 + 13.7 0.000 promoter-TSS (NM_001320468) promoter-TSS (NM_001320468) -272 NM_001363952 254887 Hs.21902 NM_173570 ENSG00000184307 ZDHHC23 DHHC-23|NIDD zinc finger DHHC-type containing 23 protein-coding chr2-5477 chr2 132836754 132836964 + 13.7 0.000 intron (NM_207481, intron 11 of 17) HAL1|LINE|L1 -78698 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr8-874 chr8 129886942 129887152 + 13.7 0.000 intron (NM_001353307, intron 4 of 13) intron (NM_001353307, intron 4 of 13) 52764 NM_001330612 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr8-2708 chr8 97646797 97647007 + 13.7 0.000 intron (NM_001363139, intron 1 of 9) Charlie9|DNA|hAT-Charlie 2718 NM_001363136 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr2-3249 chr2 238170076 238170286 + 13.7 0.000 TTS (NM_030768) TTS (NM_030768) 11211 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr2-2587 chr2 237931598 237931808 + 13.7 0.000 Intergenic Intergenic -35242 NM_001278307 140739 Hs.471785 NM_080678 ENSG00000184182 UBE2F NCE2 ubiquitin conjugating enzyme E2 F (putative) protein-coding chr3-1190 chr3 10008895 10009105 + 13.7 0.000 intron (NR_148535, intron 1 of 2) intron (NR_148535, intron 1 of 2) 2118 NR_148535 55831 Hs.475392 NM_018447 ENSG00000125037 EMC3 POB|TMEM111 ER membrane protein complex subunit 3 protein-coding chr1-2832 chr1 56284996 56285206 + 13.7 0.000 Intergenic Intergenic -129862 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr22-1044 chr22 39519456 39519666 + 13.7 0.000 promoter-TSS (NM_001675) promoter-TSS (NM_001675) -998 NM_001675 468 Hs.496487 NM_001675 ENSG00000128272 ATF4 CREB-2|CREB2|TAXREB67|TXREB activating transcription factor 4 protein-coding chr17-2119 chr17 12318660 12318870 + 13.7 0.000 Intergenic Intergenic -231203 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chr21-575 chr21 46234175 46234385 + 13.7 0.000 TTS (NM_003906) TTS (NM_003906) 5049 NR_110566 114044 Hs.655095 NR_002776 ENSG00000215424 MCM3AP-AS1 C21orf85|MCM3AP-AS|MCM3APAS|MCM3APASB|NCRNA00031 MCM3AP antisense RNA 1 ncRNA chr15-1171 chr15 99324019 99324229 + 13.7 0.000 intron (NM_001321676, intron 6 of 10) Tigger7|DNA|TcMar-Tigger 66599 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr9-1656 chr9 16872011 16872221 + 13.7 0.000 Intergenic Intergenic -1446 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr11-3592 chr11 64896245 64896455 + 13.7 0.000 intron (NM_015104, intron 39 of 40) MIRc|SINE|MIR 2087 NR_106808 102466192 NR_106808 ENSG00000274986 MIR6750 hsa-mir-6750 microRNA 6750 ncRNA chr19-2246 chr19 48999716 48999926 + 13.7 0.000 intron (NM_006666, intron 2 of 14) MIRb|SINE|MIR 5934 NR_135578 10856 Hs.515846 NM_006666 ENSG00000183207 RUVBL2 CGI-46|ECP-51|ECP51|INO80J|REPTIN|RVB2|TAP54-beta|TIH2|TIP48|TIP49B RuvB like AAA ATPase 2 protein-coding chr9-1937 chr9 20570849 20571059 + 13.7 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) 50984 NM_001286691 4300 Hs.317248 NM_004529 ENSG00000171843 MLLT3 AF9|YEATS3 MLLT3 super elongation complex subunit protein-coding chr2-2422 chr2 37886839 37887049 + 13.7 0.000 Intergenic Intergenic -11081 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr15-1050 chr15 52103624 52103834 + 13.7 0.000 Intergenic Intergenic 9046 NM_001306168 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr3-2438 chr3 36695787 36695997 + 13.7 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 43969 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr6-2388 chr6 145172711 145172921 + 13.7 0.000 Intergenic L1MA2|LINE|L1 514061 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr8-1189 chr8 48904706 48904916 + 13.7 0.000 Intergenic Intergenic 16618 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr5-2337 chr5 67989518 67989728 + 13.7 0.000 Intergenic Intergenic 196410 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA chr4-3681 chr4 44437468 44437678 + 13.7 0.000 intron (NM_198353, intron 1 of 1) intron (NM_198353, intron 1 of 1) 11236 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr1-8637 chr1 202255600 202255810 + 13.7 0.000 intron (NM_001017404, intron 4 of 15) L1ME4a|LINE|L1 41550 NM_001017404 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr12-541 chr12 57006041 57006251 + 13.7 0.000 intron (NM_014830, intron 1 of 1) CpG 400 NM_014830 9880 Hs.591025 NM_014830 ENSG00000166860 ZBTB39 ZNF922 zinc finger and BTB domain containing 39 protein-coding chr9-2809 chr9 123075821 123076031 + 13.7 0.000 intron (NM_012197, intron 17 of 25) intron (NM_012197, intron 17 of 25) 35717 NR_030331 693185 NR_030331 ENSG00000283941 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA chr3-1293 chr3 123661031 123661241 + 13.7 0.000 intron (NM_001321309, intron 22 of 32) intron (NM_001321309, intron 22 of 32) -28508 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chrX-857 chrX 134622183 134622393 + 13.7 0.000 intron (NM_001316887, intron 2 of 3) intron (NM_001316887, intron 2 of 3) 36183 NM_021796 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr2-4261 chr2 225568902 225569112 + 13.7 0.000 intron (NM_001371273, intron 4 of 7) LTR48B|LTR|ERV1 168121 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr1-2070 chr1 25875659 25875869 + 13.7 0.000 Intergenic CpG -4511 NM_178422 164091 Hs.523652 NM_178422 ENSG00000182749 PAQR7 MPRA|PGLP|mSR progestin and adipoQ receptor family member 7 protein-coding chr16-4798 chr16 85873167 85873377 + 13.7 0.000 Intergenic Intergenic -25890 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr3-1612 chr3 13507401 13507611 + 13.7 0.000 Intergenic Intergenic 27200 NM_001136041 79885 Hs.744132 NM_024827 ENSG00000163517 HDAC11 HD11 histone deacetylase 11 protein-coding chr4-4207 chr4 15197066 15197276 + 13.7 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) -142817 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr12-2421 chr12 49232982 49233192 + 13.7 0.000 intron (NM_001303114, intron 1 of 3) intron (NM_001303114, intron 1 of 3) 5068 NM_001303116 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr4-1612 chr4 53856083 53856293 + 13.7 0.000 Intergenic Intergenic 131094 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr22-1007 chr22 50541731 50541941 + 13.7 0.000 Intergenic FLAM_C|SINE|Alu -4063 NM_138433 113730 Hs.137007 NM_138433 ENSG00000130487 KLHDC7B - kelch domain containing 7B protein-coding chr15-1342 chr15 42023550 42023760 + 13.7 0.000 intron (NM_001206670, intron 1 of 19) intron (NM_001206670, intron 1 of 19) 27048 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chr1-1296 chr1 3522990 3523200 + 13.7 0.000 intron (NM_001409, intron 5 of 36) intron (NM_001409, intron 5 of 36) 37695 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr17-459 chr17 51120887 51121097 + 13.7 0.000 promoter-TSS (NM_001130528) promoter-TSS (NM_001130528) -124 NM_003971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr6-1544 chr6 72651278 72651488 + 13.7 0.000 intron (NR_120503, intron 2 of 3) intron (NR_120503, intron 2 of 3) 20888 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr17-5173 chr17 10214736 10214946 + 13.7 0.000 Intergenic Intergenic -16235 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr12-1768 chr12 88114057 88114267 + 13.7 0.000 intron (NM_025114, intron 20 of 53) L1MEf|LINE|L1 28054 NM_025114 80184 Hs.150444 NM_025114 ENSG00000198707 CEP290 3H11Ag|BBS14|CT87|JBTS5|LCA10|MKS4|NPHP6|POC3|SLSN6|rd16 centrosomal protein 290 protein-coding chr6-1677 chr6 7113062 7113272 + 13.7 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 5206 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr11-5536 chr11 93668265 93668475 + 13.7 0.000 intron (NM_033395, intron 3 of 29) intron (NM_033395, intron 3 of 29) 6688 NM_033395 85459 Hs.458418 NM_033395 ENSG00000166004 CEP295 KIAA1731 centrosomal protein 295 protein-coding chr7-1856 chr7 1656896 1657106 + 13.7 0.000 Intergenic L1ME2z|LINE|L1 -31118 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr12-4412 chr12 6834962 6835172 + 13.7 0.000 intron (NM_014262, intron 9 of 14) L2c|LINE|L2 -5858 NM_002075 2784 Hs.631657 NM_002075 ENSG00000111664 GNB3 CSNB1H G protein subunit beta 3 protein-coding chr12-1267 chr12 59905191 59905401 + 13.7 0.000 Intergenic Intergenic 215926 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr2-7030 chr2 152224091 152224301 + 13.7 0.000 Intergenic Intergenic -48433 NM_005843 10254 Hs.17200 NM_005843 ENSG00000115145 STAM2 Hbp|STAM2A|STAM2B signal transducing adaptor molecule 2 protein-coding chr6-1786 chr6 109174881 109175091 + 13.7 0.000 intron (NR_152435, intron 1 of 45) intron (NR_152435, intron 1 of 45) 9155 NR_152435 221262 Hs.373914 NM_173671 ENSG00000203799 CCDC162P C6orf183|C6orf184|C6orf185|CCDC162 coiled-coil domain containing 162, pseudogene pseudo chr1-4082 chr1 223090105 223090315 + 13.7 0.000 Intergenic Intergenic 53038 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr2-1544 chr2 200306490 200306700 + 13.7 0.000 promoter-TSS (NM_001100423) promoter-TSS (NM_001100423) -98 NM_001100423 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr7-5840 chr7 87186265 87186475 + 13.7 0.000 intron (NR_024550, intron 12 of 17) AluJo|SINE|Alu 33362 NM_024315 79161 Hs.619593 NM_024315 ENSG00000135185 TMEM243 C7orf23|MM-TRAG|MMTRAG transmembrane protein 243 protein-coding chr20-2836 chr20 60457500 60457710 + 13.7 0.000 Intergenic Intergenic 15371 NR_109903 101928048 Hs.572803 NR_109903 LOC101928048 - uncharacterized LOC101928048 ncRNA chr4-1669 chr4 141410903 141411113 + 13.7 0.000 Intergenic Intergenic -78391 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr2-3340 chr2 210887901 210888111 + 13.7 0.000 Intergenic L1PA15|LINE|L1 270435 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chrX-1176 chrX 52935089 52935299 + 13.7 0.000 Intergenic CpG 21561 NM_001099684 727866 Hs.6451 NM_001099684 ENSG00000179304 FAM156B TMEM29B family with sequence similarity 156 member B protein-coding chr11-1766 chr11 18749752 18749962 + 13.7 0.000 intron (NM_001278236, intron 3 of 14) intron (NM_001278236, intron 3 of 14) -23669 NM_173588 283284 Hs.434152 NM_173588 ENSG00000179057 IGSF22 IGFN2 immunoglobulin superfamily member 22 protein-coding chr19-2670 chr19 11624073 11624283 + 13.7 0.000 Intergenic HERVK3-int|LTR|ERVK 26695 NM_001290085 199692 Hs.526665 NM_145295 ENSG00000198551 ZNF627 - zinc finger protein 627 protein-coding chr2-9560 chr2 240262783 240262993 + 13.7 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -122230 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr3-2832 chr3 17413823 17414033 + 13.7 0.000 intron (NM_001349091, intron 2 of 19) intron (NM_001349091, intron 2 of 19) 286092 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr8-2351 chr8 24333171 24333381 + 13.7 0.000 intron (NM_014265, intron 13 of 22) L1MA9|LINE|L1 39207 NM_014265 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr3-6466 chr3 107871145 107871355 + 13.7 0.000 intron (NR_024276, intron 3 of 7) intron (NR_024276, intron 3 of 7) 6818 NR_024276 151658 Hs.159043 NR_015414 ENSG00000241469 LINC00635 - long intergenic non-protein coding RNA 635 ncRNA chr3-2263 chr3 54309778 54309988 + 13.7 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 187331 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr16-1305 chr16 87432036 87432246 + 13.7 0.000 intron (NM_015144, intron 3 of 12) intron (NM_015144, intron 3 of 12) 39805 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr2-5367 chr2 96793754 96793964 + 13.7 0.000 intron (NM_020184, intron 1 of 6) AluSz|SINE|Alu -4419 NR_036074 100422928 NR_036074 ENSG00000264157 MIR3127 mir-3127 microRNA 3127 ncRNA chr4-1406 chr4 2082538 2082748 + 13.7 0.000 intron (NM_181808, intron 21 of 25) intron (NM_181808, intron 21 of 25) 23316 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr6-2029 chr6 52929383 52929593 + 13.7 0.000 Intergenic MIRb|SINE|MIR -19790 NM_001363542 2940 Hs.102484 NM_000847 ENSG00000174156 GSTA3 GSTA3-3|GTA3 glutathione S-transferase alpha 3 protein-coding chr2-2220 chr2 135786889 135787099 + 13.7 0.000 TTS (NM_002299) TTS (NM_002299) -33197 NR_045486 100507600 Hs.662020 NR_045486 ENSG00000226806 LOC100507600 - uncharacterized LOC100507600 ncRNA chr19-1756 chr19 5462095 5462305 + 13.7 0.000 Intergenic Intergenic 6783 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr3-1058 chr3 22245346 22245556 + 13.7 0.000 Intergenic Intergenic 288312 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr19-908 chr19 2248189 2248399 + 13.7 0.000 exon (NM_007165, exon 9 of 9) exon (NM_007165, exon 9 of 9) -1029 NM_000479 268 Hs.112432 NM_000479 ENSG00000104899 AMH MIF|MIS anti-Mullerian hormone protein-coding chr2-1480 chr2 109166526 109166736 + 13.7 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -25043 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr6-1797 chr6 119175412 119175622 + 13.7 0.000 Intergenic MIR3|SINE|MIR -26324 NM_001288576 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr14-2945 chr14 47561628 47561838 + 13.7 0.000 intron (NM_001113498, intron 1 of 16) L1PA15|LINE|L1 113221 NM_001113498 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr21-663 chr21 41581352 41581562 + 13.7 0.000 Intergenic Intergenic -73299 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr6-1359 chr6 47309179 47309389 + 13.7 0.000 intron (NM_014452, intron 1 of 5) CpG 621 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr12-1378 chr12 65948776 65948986 + 13.7 0.000 intron (NM_001300918, intron 3 of 4) intron (NM_001300918, intron 3 of 4) -66556 NR_158985 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr7-2441 chr7 129556649 129556859 + 13.7 0.000 Intergenic LTR85a|LTR|Gypsy? 54223 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr7-1895 chr7 151275132 151275342 + 13.7 0.000 5' UTR (NM_001003802, exon 2 of 14) 5' UTR (NM_001003802, exon 2 of 14) 1497 NM_001003802 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr10-1632 chr10 78973596 78973806 + 13.7 0.000 intron (NR_015429, intron 3 of 7) CpG 93747 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA GL000218.1-3 GL000218.1 40079 40289 + 13.7 0.000 NA NA NA NA chr5-5071 chr5 95366353 95366563 + 13.7 0.000 Intergenic L1PB1|LINE|L1 -24908 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr7-1633 chr7 27872442 27872652 + 13.7 0.000 intron (NM_175061, intron 3 of 4) intron (NM_175061, intron 3 of 4) 132452 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr5-978 chr5 9513957 9514167 + 13.7 0.000 intron (NR_109935, intron 2 of 2) MLT1D|LTR|ERVL-MaLR 2729 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr10-1611 chr10 62278523 62278733 + 13.7 0.000 Intergenic Intergenic -9784 NM_145307 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding chr10-1367 chr10 127148579 127148789 + 13.6 0.000 intron (NM_001039762, intron 5 of 5) intron (NM_001039762, intron 5 of 5) 47907 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr6-2106 chr6 160978254 160978464 + 13.6 0.000 Intergenic MER5A|DNA|hAT-Charlie -13368 NM_001291958 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr17-1533 chr17 78908572 78908782 + 13.6 0.000 intron (NM_003255, intron 1 of 4) MIR1_Amn|SINE|MIR -5476 NM_001243541 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr2-4329 chr2 238294828 238295038 + 13.6 0.000 Intergenic Intergenic -6323 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr6-2431 chr6 159760686 159760896 + 13.6 0.000 non-coding (NR_037166, exon 2 of 2) non-coding (NR_037166, exon 2 of 2) -1254 NM_005891 39 Hs.571037 NM_005891 ENSG00000120437 ACAT2 - acetyl-CoA acetyltransferase 2 protein-coding chr1-2848 chr1 115239557 115239767 + 13.6 0.000 Intergenic Intergenic -43372 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr6-2846 chr6 1871883 1872093 + 13.6 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 262073 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr7-491 chr7 74658402 74658612 + 13.6 0.000 intron (NM_001163636, intron 1 of 33) CpG 789 NM_033000 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr14-1492 chr14 39322989 39323199 + 13.6 0.000 intron (NM_001354150, intron 19 of 23) MARNA|DNA|TcMar-Mariner 55709 NM_001247990 4253 Hs.287694 NM_005930 ENSG00000150527 MIA2 CTAGE5|MEA6|MGEA|MGEA11|MGEA6|TALI MIA SH3 domain ER export factor 2 protein-coding chr10-2488 chr10 32042840 32043050 + 13.6 0.000 intron (NM_004521, intron 2 of 25) MIR|SINE|MIR 13480 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr1-5151 chr1 158662269 158662479 + 13.6 0.000 intron (NM_003126, intron 17 of 51) intron (NM_003126, intron 17 of 51) 24341 NM_003126 6708 Hs.119825 NM_003126 ENSG00000163554 SPTA1 EL2|HPP|HS3|SPH3|SPTA spectrin alpha, erythrocytic 1 protein-coding chr1-4537 chr1 47437088 47437298 + 13.6 0.000 5' UTR (NM_004474, exon 1 of 1) 5' UTR (NM_004474, exon 1 of 1) 124 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr22-1077 chr22 24367841 24368051 + 13.6 0.000 intron (NM_015330, intron 13 of 16) intron (NM_015330, intron 13 of 16) 25838 NM_001254733 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr15-2250 chr15 40103463 40103673 + 13.6 0.000 intron (NM_001003943, intron 3 of 3) intron (NM_001003943, intron 3 of 3) 2518 NM_001003942 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr7-1713 chr7 1927873 1928083 + 13.6 0.000 intron (NM_001013837, intron 17 of 18) intron (NM_001013837, intron 17 of 18) 12593 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr10-1853 chr10 69597536 69597746 + 13.6 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -24219 NM_020999 50674 Hs.532682 NM_020999 ENSG00000122859 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding chr3-1146 chr3 49803656 49803866 + 13.6 0.000 intron (NM_203370, intron 1 of 1) intron (NM_203370, intron 1 of 1) 500 NM_203370 389119 Hs.86674 NM_203370 ENSG00000185614 INKA1 C3orf54|FAM212A inka box actin regulator 1 protein-coding chr22-717 chr22 28917980 28918190 + 13.6 0.000 intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 696 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr1-1932 chr1 12618081 12618291 + 13.6 0.000 promoter-TSS (NM_004753) promoter-TSS (NM_004753) 24 NM_004753 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding chr11-1527 chr11 120169215 120169425 + 13.6 0.000 intron (NR_159965, intron 1 of 1) CpG 343 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chr7-1778 chr7 74203257 74203467 + 13.6 0.000 Intergenic ERVL47-int|LTR|ERVL -6644 NM_032464 7462 Hs.741249 NM_014146 ENSG00000086730 LAT2 HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 linker for activation of T cells family member 2 protein-coding chr2-1486 chr2 175097434 175097644 + 13.6 0.000 non-coding (NR_045774, exon 10 of 13) non-coding (NR_045774, exon 10 of 13) 70170 NR_030630 100126350 NR_030630 ENSG00000215973 MIR933 MIRN933|hsa-mir-933|mir-933 microRNA 933 ncRNA chr17-1353 chr17 57988396 57988606 + 13.6 0.000 promoter-TSS (NM_007146) promoter-TSS (NM_007146) -247 NM_007146 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding chr1-4693 chr1 231421095 231421305 + 13.6 0.000 exon (NM_022051, exon 1 of 5) exon (NM_022051, exon 1 of 5) 3844 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr8-3368 chr8 48554205 48554415 + 13.6 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 2743 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr8-1678 chr8 42139981 42140191 + 13.6 0.000 Intergenic CpG -12860 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr4-1541 chr4 159048031 159048241 + 13.6 0.000 Intergenic Intergenic -12907 NM_152543 152940 Hs.415576 NM_152543 ENSG00000164123 C4orf45 - chromosome 4 open reading frame 45 protein-coding chrX-980 chrX 151153101 151153311 + 13.6 0.000 Intergenic Intergenic -15016 NR_036256 100422930 NR_036256 ENSG00000265789 MIR4330 - microRNA 4330 ncRNA chr19-2274 chr19 757645 757855 + 13.6 0.000 exon (NM_173481, exon 2 of 5) exon (NM_173481, exon 2 of 5) 6638 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr3-2355 chr3 151357015 151357225 + 13.6 0.000 intron (NM_053002, intron 17 of 42) intron (NM_053002, intron 17 of 42) -16298 NM_176876 64805 Hs.591281 NM_022788 ENSG00000169313 P2RY12 ADPG-R|BDPLT8|HORK3|P2T(AC)|P2Y(12)R|P2Y(AC)|P2Y(ADP)|P2Y(cyc)|P2Y12|SP1999 purinergic receptor P2Y12 protein-coding chr10-2478 chr10 29304506 29304716 + 13.6 0.000 intron (NM_032517, intron 3 of 4) intron (NM_032517, intron 3 of 4) 15541 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr8-1642 chr8 123150610 123150820 + 13.6 0.000 intron (NM_001363149, intron 21 of 21) intron (NM_001363149, intron 21 of 21) -28332 NM_207006 84985 Hs.379821 NM_032899 ENSG00000147689 FAM83A BJ-TSA-9 family with sequence similarity 83 member A protein-coding chr2-1676 chr2 105388930 105389140 + 13.6 0.000 intron (NM_201557, intron 1 of 5) intron (NM_201557, intron 1 of 5) 10016 NM_001450 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr16-3243 chr16 86589836 86590046 + 13.6 0.000 Intergenic L2a|LINE|L2 11432 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr12-1815 chr12 7806980 7807190 + 13.6 0.000 Intergenic Intergenic 17683 NM_024865 79923 Hs.635882 NM_024865 ENSG00000111704 NANOG - Nanog homeobox protein-coding chr1-3513 chr1 168709445 168709655 + 13.6 0.000 intron (NM_001937, intron 2 of 3) intron (NM_001937, intron 2 of 3) 19656 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr1-960 chr1 232630017 232630227 + 13.6 0.000 Intergenic CpG -87949 NR_146922 105373199 Hs.254475 NR_146922 ENSG00000225919 LINC01745 - long intergenic non-protein coding RNA 1745 ncRNA KI270751.1-2 KI270751.1 140946 141156 + 13.6 0.000 NA NA NA NA chr1-6530 chr1 27573929 27574139 + 13.6 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 29460 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr20-1112 chr20 7841733 7841943 + 13.6 0.000 Intergenic Intergenic 98620 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr13-652 chr13 37702088 37702298 + 13.6 0.000 intron (NM_001135958, intron 2 of 9) MLT1C|LTR|ERVL-MaLR -103349 NM_001286666 10631 Hs.136348 NM_006475 ENSG00000133110 POSTN OSF-2|OSF2|PDLPOSTN|PN periostin protein-coding chr2-5168 chr2 29663438 29663648 + 13.6 0.000 intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -188166 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chrX-2557 chrX 100840401 100840611 + 13.6 0.000 intron (NM_001306206, intron 14 of 14) MER20|DNA|hAT-Charlie 20143 NM_001306206 1478 Hs.132370 NM_001325 ENSG00000101811 CSTF2 CstF-64 cleavage stimulation factor subunit 2 protein-coding chr10-1025 chr10 87025572 87025782 + 13.6 0.000 TTS (NM_001146157) TTS (NM_001146157) 5383 NM_001146157 643161 Hs.729945 NM_001146157 ENSG00000188100 FAM25A bA96C23.5 family with sequence similarity 25 member A protein-coding chr2-1746 chr2 41610816 41611026 + 13.6 0.000 Intergenic Intergenic -266634 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr6-283 chr6 35728072 35728282 + 13.6 0.000 intron (NR_027117, intron 9 of 9) CpG 406 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr9-2680 chr9 70590007 70590217 + 13.6 0.000 intron (NM_001366143, intron 21 of 25) intron (NM_001366143, intron 21 of 25) -175455 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr19-1492 chr19 18659343 18659553 + 13.6 0.000 intron (NM_001345983, intron 1 of 2) intron (NM_001345983, intron 1 of 2) 14810 NM_001345983 55295 Hs.250632 NM_018316 ENSG00000167487 KLHL26 - kelch like family member 26 protein-coding chr1-3596 chr1 21022268 21022478 + 13.6 0.000 intron (NM_003760, intron 2 of 31) intron (NM_003760, intron 2 of 31) -33941 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr6-3076 chr6 77025825 77026035 + 13.6 0.000 Intergenic Intergenic -432307 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr10-1779 chr10 71975887 71976097 + 13.6 0.000 intron (NM_004273, intron 1 of 2) MIRc|SINE|MIR 11597 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr9-836 chr9 129803609 129803819 + 13.6 0.000 intron (NR_134027, intron 1 of 2) CpG 530 NM_001317893 27348 Hs.252682 NM_014506 ENSG00000136816 TOR1B DQ1 torsin family 1 member B protein-coding chr12-2427 chr12 49990355 49990565 + 13.6 0.000 intron (NM_001320006, intron 17 of 17) intron (NM_001320006, intron 17 of 17) 17513 NM_001652 363 Hs.54505 NM_001652 ENSG00000086159 AQP6 AQP2L|KID aquaporin 6 protein-coding chr8-552 chr8 37143022 37143232 + 13.6 0.000 Intergenic Intergenic 350786 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr19-1851 chr19 13039261 13039471 + 13.6 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 14587 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr5-4122 chr5 80914389 80914599 + 13.6 0.000 Intergenic Intergenic -45869 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding chr7-1754 chr7 42247363 42247573 + 13.6 0.000 Intergenic Intergenic -10259 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr15-579 chr15 43225486 43225696 + 13.6 0.000 Intergenic L2b|LINE|L2 -4466 NM_001114134 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chr11-1541 chr11 9384885 9385095 + 13.6 0.000 intron (NM_006391, intron 1 of 24) CpG 338 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chr17-823 chr17 50055777 50055987 + 13.6 0.000 promoter-TSS (NM_002204) promoter-TSS (NM_002204) -143 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 PICART1 - p53 inducible cancer associated RNA transcript 1 ncRNA chr13-157 chr13 113109115 113109325 + 13.6 0.000 intron (NM_000131, intron 2 of 8) CpG 3429 NR_051961 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr8-1922 chr8 38839759 38839969 + 13.6 0.000 intron (NM_001352791, intron 7 of 11) intron (NM_001352791, intron 7 of 11) 34414 NM_001352791 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr19-1777 chr19 41298371 41298581 + 13.6 0.000 intron (NM_144732, intron 10 of 14) intron (NM_144732, intron 10 of 14) -11696 NM_052848 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr19-2631 chr19 4144750 4144960 + 13.6 0.000 Intergenic Intergenic -8776 NM_001271997 84699 Hs.247744 NM_032607 ENSG00000060566 CREB3L3 CREB-H|CREBH|HYST1481 cAMP responsive element binding protein 3 like 3 protein-coding chr21-881 chr21 44320653 44320863 + 13.6 0.000 intron (NM_001002021, intron 15 of 24) intron (NM_001002021, intron 15 of 24) 17580 NM_001271442 755 Hs.517331 NM_004928 ENSG00000160226 CFAP410 C21orf2|LRRC76|RDMS|SMDAX|YF5/A2 cilia and flagella associated protein 410 protein-coding chr11-1539 chr11 9073943 9074153 + 13.6 0.000 intron (NM_001367977, intron 4 of 22) intron (NM_001367977, intron 4 of 22) 16331 NR_049874 100847015 NR_049874 ENSG00000264984 MIR5691 - microRNA 5691 ncRNA chr20-1052 chr20 2749661 2749871 + 13.6 0.000 intron (NM_001110514, intron 10 of 17) CpG-17375 50861 NM_019609 56265 Hs.659346 NM_019609 ENSG00000088882 CPXM1 CPX1|CPXM carboxypeptidase X, M14 family member 1 protein-coding chr1-1925 chr1 6743988 6744198 + 13.6 0.000 Intergenic Intergenic 16566 NR_104621 100505887 Hs.250839 NR_104620 LINC01672 NMR long intergenic non-protein coding RNA 1672 ncRNA chr19-1442 chr19 6393357 6393567 + 13.6 0.000 promoter-TSS (NM_002096) promoter-TSS (NM_002096) -298 NM_002096 2962 Hs.68257 NM_002096 ENSG00000125651 GTF2F1 BTF4|RAP74|TF2F1|TFIIF general transcription factor IIF subunit 1 protein-coding chr17-1292 chr17 33751130 33751340 + 13.6 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -217475 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr20-749 chr20 23693326 23693536 + 13.6 0.000 Intergenic Intergenic -4406 NM_001899 1472 Hs.654549 NM_001899 ENSG00000101441 CST4 - cystatin S protein-coding chr17-3875 chr17 49441400 49441610 + 13.6 0.000 Intergenic Intergenic 20244 NR_110805 101927207 Hs.638402 NR_110805 ENSG00000249497 LINC02075 - long intergenic non-protein coding RNA 2075 ncRNA chr7-2324 chr7 121289078 121289288 + 13.6 0.000 intron (NM_024913, intron 22 of 22) intron (NM_024913, intron 22 of 22) -36184 NM_016087 51384 Hs.272375 NM_016087 ENSG00000002745 WNT16 - Wnt family member 16 protein-coding chr2-4705 chr2 229170853 229171063 + 13.6 0.000 intron (NM_001100818, intron 1 of 2) intron (NM_001100818, intron 1 of 2) 61134 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr20-594 chr20 36194940 36195150 + 13.6 0.000 intron (NM_177996, intron 12 of 19) intron (NM_177996, intron 12 of 19) -39285 NR_147703 100130373 Hs.570339 NR_147703 LOC100130373 - uncharacterized LOC100130373 ncRNA chr9-1699 chr9 98251463 98251673 + 13.6 0.000 intron (NR_051978, intron 1 of 11) MIR|SINE|MIR 4081 NR_051978 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr11-2466 chr11 61023309 61023519 + 13.6 0.000 Intergenic Intergenic 51734 NM_001254751 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr2-2494 chr2 152004683 152004893 + 13.6 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) -30810 NM_001330117 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr15-1029 chr15 91561378 91561588 + 13.6 0.000 Intergenic Intergenic 98144 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr7-1583 chr7 100705800 100706010 + 13.6 0.000 promoter-TSS (NM_005837) promoter-TSS (NM_005837) -216 NM_005837 10248 Hs.416994 NM_005837 ENSG00000172336 POP7 0610037N12Rik|RPP2|RPP20 POP7 homolog, ribonuclease P/MRP subunit protein-coding chr2-5567 chr2 169808298 169808508 + 13.6 0.000 intron (NM_003142, intron 6 of 11) intron (NM_003142, intron 6 of 11) -7876 NR_145754 109617017 NR_145754 SNORD3K - small nucleolar RNA, C/D box 3K snoRNA chr6-4032 chr6 128978742 128978952 + 13.6 0.000 intron (NM_000426, intron 1 of 64) intron (NM_000426, intron 1 of 64) 95706 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr16-2073 chr16 85291466 85291676 + 13.6 0.000 Intergenic Intergenic 8613 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr11-1583 chr11 368483 368693 + 13.6 0.000 promoter-TSS (NM_178537) promoter-TSS (NM_178537) -911 NM_178537 338707 Hs.148074 NM_178537 ENSG00000182272 B4GALNT4 - beta-1,4-N-acetyl-galactosaminyltransferase 4 protein-coding chr2-2252 chr2 233706831 233707041 + 13.6 0.000 intron (NM_205862, intron 2 of 5) MER70B|LTR|ERVL -6056 NM_019078 54579 Hs.554822 NM_019078 ENSG00000240224 UGT1A5 UDPGT|UDPGT 1-5|UGT1E UDP glucuronosyltransferase family 1 member A5 protein-coding chr11-3414 chr11 12331415 12331625 + 13.6 0.000 intron (NM_032867, intron 6 of 8) intron (NM_032867, intron 6 of 8) 44620 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr16-699 chr16 740865 741075 + 13.6 0.000 promoter-TSS (NM_022493) promoter-TSS (NM_022493) 27 NM_001304799 64428 Hs.513247 NM_022493 ENSG00000103245 CIAO3 HPRN|IOP1|LET1L|NAR1|NARFL|PRN cytosolic iron-sulfur assembly component 3 protein-coding chr2-2620 chr2 55010222 55010432 + 13.6 0.000 promoter-TSS (NM_007008) promoter-TSS (NM_007008) -55 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr10-1119 chr10 119209418 119209628 + 13.6 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 1952 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr20-387 chr20 62938295 62938505 + 13.6 0.000 promoter-TSS (NM_080797) promoter-TSS (NM_080797) 253 NM_017896 54994 Hs.353013 NM_017896 ENSG00000101193 GID8 C20orf11|TWA1 GID complex subunit 8 homolog protein-coding chr11-2507 chr11 68271048 68271258 + 13.6 0.000 intron (NM_022338, intron 1 of 3) intron (NM_022338, intron 1 of 3) 820 NM_022338 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr5-2803 chr5 10018847 10019057 + 13.6 0.000 Intergenic AluJr|SINE|Alu -115128 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr5-5339 chr5 130712142 130712352 + 13.6 0.000 Intergenic Intergenic 453009 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr3-5358 chr3 143065957 143066167 + 13.6 0.000 Intergenic Intergenic -53709 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr12-1435 chr12 71589728 71589938 + 13.6 0.000 Intergenic Intergenic 74015 NM_144982 196441 Hs.245798 NM_144982 ENSG00000133858 ZFC3H1 CCDC131|CSRC2|PSRC2 zinc finger C3H1-type containing protein-coding chr5-1783 chr5 39765528 39765738 + 13.6 0.000 Intergenic HAL1b|LINE|L1 245202 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr14-1866 chr14 74671745 74671955 + 13.6 0.000 intron (NM_001039479, intron 11 of 19) MIR1_Amn|SINE|MIR 41230 NM_001039479 9870 Hs.497417 NM_014821 ENSG00000119682 AREL1 FIEL1|KIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding chr10-4775 chr10 5146752 5146962 + 13.6 0.000 Intergenic Intergenic 38330 NR_027916 340811 Hs.282513 NM_001007536 ENSG00000264006 AKR1C8P AKR1CL1 aldo-keto reductase family 1 member C8, pseudogene pseudo chr2-4665 chr2 201232127 201232337 + 13.6 0.000 Intergenic Intergenic -1211 NM_033355 841 Hs.599762 NM_001228 ENSG00000064012 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8 protein-coding chr15-785 chr15 52678947 52679157 + 13.6 0.000 promoter-TSS (NR_104457) promoter-TSS (NR_104457) -418 NR_104457 56204 Hs.152385 NM_019600 ENSG00000047346 FAM214A KIAA1370 family with sequence similarity 214 member A protein-coding chr3-1614 chr3 17678489 17678699 + 13.6 0.000 intron (NM_001134381, intron 1 of 23) intron (NM_001134381, intron 1 of 23) 21426 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr11-2351 chr11 97722348 97722558 + 13.6 0.000 Intergenic L1PB1|LINE|L1 1214028 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr4-2333 chr4 162075747 162075957 + 13.6 0.000 intron (NM_020116, intron 2 of 15) LTR16|LTR|ERVL 53119 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr15-1090 chr15 57873978 57874188 + 13.6 0.000 Intergenic L1MB7|LINE|L1 139940 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr3-1722 chr3 100090558 100090768 + 13.6 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) 23850 NM_182909 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr6-1266 chr6 45650668 45650878 + 13.6 0.000 Intergenic Intergenic 228498 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr19-1358 chr19 52048876 52049086 + 13.6 0.000 promoter-TSS (NM_014650) promoter-TSS (NM_014650) -143 NM_014650 9668 Hs.655934 NM_014650 ENSG00000256087 ZNF432 - zinc finger protein 432 protein-coding chr18-623 chr18 10035261 10035471 + 13.6 0.000 Intergenic Intergenic 121350 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr4-1598 chr4 26239400 26239610 + 13.6 0.000 Intergenic Intergenic -80205 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr18-614 chr18 3180489 3180699 + 13.6 0.000 intron (NM_019856, intron 5 of 36) intron (NM_019856, intron 5 of 36) 39374 NM_019856 8736 Hs.464469 NM_003803 ENSG00000101605 MYOM1 SKELEMIN myomesin 1 protein-coding chr7-1821 chr7 107958868 107959078 + 13.6 0.000 intron (NM_002291, intron 20 of 33) intron (NM_002291, intron 20 of 33) 44188 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr3-1668 chr3 183815078 183815288 + 13.6 0.000 TTS (NM_024871) TTS (NM_024871) -4732 NR_046727 100874113 NR_046727 YEATS2-AS1 - YEATS2 antisense RNA 1 ncRNA chr1-4776 chr1 12279835 12280045 + 13.6 0.000 intron (NM_015378, intron 20 of 69) intron (NM_015378, intron 20 of 69) 49910 NM_015378 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr9-1872 chr9 92528501 92528711 + 13.6 0.000 promoter-TSS (NR_039817) promoter-TSS (NR_039817) -548 NR_039817 100616351 NR_039817 ENSG00000264158 MIR4670 - microRNA 4670 ncRNA chr11-4875 chr11 37141701 37141911 + 13.6 0.000 Intergenic MLT2A2|LTR|ERVL -543527 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr1-3175 chr1 94541966 94542176 + 13.6 0.000 promoter-TSS (NM_001178096) promoter-TSS (NM_001178096) -214 NM_001178096 2152 Hs.62192 NM_001993 ENSG00000117525 F3 CD142|TF|TFA coagulation factor III, tissue factor protein-coding chr19-3175 chr19 42569814 42570024 + 13.6 0.000 intron (NR_073180, intron 2 of 2) intron (NR_073180, intron 2 of 2) 25005 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr4-2115 chr4 57405415 57405625 + 13.6 0.000 Intergenic Intergenic -20352 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr1-3857 chr1 39092323 39092533 + 13.6 0.000 intron (NM_012090, intron 1 of 92) MIRb|SINE|MIR 8261 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr21-208 chr21 43739784 43739994 + 13.6 0.000 intron (NM_003681, intron 2 of 10) intron (NM_003681, intron 2 of 10) -1597 NM_001331030 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr6-2508 chr6 147654508 147654718 + 13.6 0.000 Intergenic Intergenic 145923 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr17-3533 chr17 72513007 72513217 + 13.6 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 79692 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr12-1412 chr12 26195223 26195433 + 13.6 0.000 promoter-TSS (NM_001135823) promoter-TSS (NM_001135823) -8 NM_001135823 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr14-843 chr14 94599358 94599568 + 13.6 0.000 Intergenic Intergenic -12928 NM_001085 12 Hs.534293 NM_001085 ENSG00000196136 SERPINA3 AACT|ACT|GIG24|GIG25 serpin family A member 3 protein-coding chr4-2536 chr4 61090842 61091052 + 13.6 0.000 Intergenic MSTD|LTR|ERVL-MaLR -52709 NR_147148 105377249 Hs.575120 NR_147148 ENSG00000240152 LINC02271 - long intergenic non-protein coding RNA 2271 ncRNA chr11-1587 chr11 2580722 2580932 + 13.6 0.000 intron (NM_181798, intron 6 of 15) intron (NM_181798, intron 6 of 15) 119171 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr20-631 chr20 45344401 45344611 + 13.6 0.000 intron (NM_002999, intron 1 of 4) intron (NM_002999, intron 1 of 4) 3918 NM_002999 6385 Hs.632267 NM_002999 ENSG00000124145 SDC4 SYND4 syndecan 4 protein-coding chr8-432 chr8 41151639 41151849 + 13.6 0.000 Intergenic MLT2B4|LTR|ERVL 119399 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr4-1161 chr4 158996849 158997059 + 13.6 0.000 intron (NM_152543, intron 1 of 4) intron (NM_152543, intron 1 of 4) 38275 NM_152543 152940 Hs.415576 NM_152543 ENSG00000164123 C4orf45 - chromosome 4 open reading frame 45 protein-coding chr16-3175 chr16 82227001 82227211 + 13.6 0.000 Intergenic Intergenic -56882 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr9-1252 chr9 78030546 78030756 + 13.6 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 1160 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr9-503 chr9 85741956 85742166 + 13.6 0.000 promoter-TSS (NM_001330701) promoter-TSS (NM_001330701) -32 NM_001286715 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr16-2769 chr16 11303418 11303628 + 13.6 0.000 Intergenic MER50|LTR|ERV1 3004 NR_031678 100313773 NR_031678 ENSG00000221801 MIR548H2 MIR548H-2|MIRN548H2 microRNA 548h-2 ncRNA chr6-1742 chr6 44255859 44256069 + 13.6 0.000 intron (NM_001286519, intron 1 of 1) intron (NM_001286519, intron 1 of 1) 1324 NM_001286510 347734 Hs.182885 NM_178148 ENSG00000157593 SLC35B2 PAPST1|SLL|UGTrel4 solute carrier family 35 member B2 protein-coding chr3-3716 chr3 179181196 179181406 + 13.6 0.000 intron (NM_006218, intron 1 of 20) intron (NM_006218, intron 1 of 20) 32944 NM_006218 5290 Hs.553498 NM_006218 ENSG00000121879 PIK3CA CLAPO|CLOVE|CWS5|MCAP|MCM|MCMTC|PI3K|PI3K-alpha|p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha protein-coding chr16-2442 chr16 83926531 83926741 + 13.6 0.000 3' UTR (NM_012213, exon 5 of 5) 3' UTR (NM_012213, exon 5 of 5) -26604 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr4-2810 chr4 36019606 36019816 + 13.6 0.000 intron (NR_146893, intron 35 of 36) intron (NR_146893, intron 35 of 36) 224228 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chrX-748 chrX 14927489 14927699 + 13.6 0.000 Intergenic L2c|LINE|L2 42303 NM_001177475 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr1-3722 chr1 220218662 220218872 + 13.6 0.000 intron (NM_012414, intron 2 of 34) intron (NM_012414, intron 2 of 34) -18091 NR_002994 677818 Hs.730572 NR_002994 ENSG00000222370 SNORA36B ACA36b small nucleolar RNA, H/ACA box 36B snoRNA chr4-342 chr4 38664084 38664294 + 13.6 0.000 promoter-TSS (NM_016531) promoter-TSS (NM_016531) -10 NM_016531 51274 Hs.298658 NM_016531 ENSG00000109787 KLF3 BKLF Kruppel like factor 3 protein-coding chr9-1731 chr9 124139161 124139371 + 13.6 0.000 Intergenic Intergenic -118340 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr22-922 chr22 37432335 37432545 + 13.6 0.000 Intergenic Intergenic -4961 NM_052906 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr20-1037 chr20 51541054 51541264 + 13.6 0.000 intron (NM_001258292, intron 1 of 9) intron (NM_001258292, intron 1 of 9) 1560 NM_012340 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr8-1161 chr8 22703519 22703729 + 13.6 0.000 Intergenic CpG -10144 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr12-1530 chr12 80353421 80353631 + 13.6 0.000 intron (NM_001368062, intron 50 of 62) intron (NM_001368062, intron 50 of 62) -90709 NM_001145026 374462 Hs.539284 NM_001145026 ENSG00000139304 PTPRQ DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q protein tyrosine phosphatase receptor type Q protein-coding chr5-2436 chr5 126433465 126433675 + 13.6 0.000 intron (NR_146196, intron 1 of 14) intron (NR_146196, intron 1 of 14) 10161 NR_146195 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr1-6188 chr1 204819404 204819614 + 13.6 0.000 Intergenic LTR16A1|LTR|ERVL -9143 NM_001365986 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr20-479 chr20 10434013 10434223 + 13.6 0.000 non-coding (NR_072977, exon 1 of 5) non-coding (NR_072977, exon 1 of 5) 104 NR_072977 8195 Hs.472119 NM_018848 ENSG00000125863 MKKS BBS6|HMCS|KMS|MKS McKusick-Kaufman syndrome protein-coding chr2-2390 chr2 9654323 9654533 + 13.6 0.000 Intergenic Intergenic -23431 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr3-2513 chr3 8888102 8888312 + 13.6 0.000 intron (NM_020165, intron 12 of 12) MER74B|LTR|ERVL 75265 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr10-5552 chr10 87552728 87552938 + 13.6 0.000 3' UTR (NM_004897, exon 5 of 5) 3' UTR (NM_004897, exon 5 of 5) 45000 NM_001178118 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding chr19-4952 chr19 45057354 45057564 + 13.6 0.000 intron (NR_103529, intron 6 of 20) L2b|LINE|L2 -18168 NM_001319055 79760 Hs.466919 NM_024707 ENSG00000142252 GEMIN7 SIP3 gem nuclear organelle associated protein 7 protein-coding chr8-1196 chr8 59119536 59119746 + 13.6 0.000 promoter-TSS (NM_014729) promoter-TSS (NM_014729) 431 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr7-772 chr7 47941505 47941715 + 13.6 0.000 intron (NM_138295, intron 2 of 56) intron (NM_138295, intron 2 of 56) 6881 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr5-1658 chr5 14648567 14648777 + 13.6 0.000 Intergenic Intergenic 3710 NR_132980 106635683 NR_132980 SNORD141A - small nucleolar RNA, C/D box 141A snoRNA chr7-2458 chr7 157340244 157340454 + 13.6 0.000 intron (NM_005494, intron 1 of 7) intron (NM_005494, intron 1 of 7) 3345 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr4-1318 chr4 139873087 139873297 + 13.6 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 207373 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr17-1373 chr17 78172577 78172787 + 13.6 0.000 3' UTR (NM_001363778, exon 3 of 3) 3' UTR (NM_001363778, exon 3 of 3) 4137 NM_001363778 9144 Hs.464210 NM_004710 ENSG00000108639 SYNGR2 - synaptogyrin 2 protein-coding chr11-4403 chr11 81787707 81787917 + 13.6 0.000 Intergenic Intergenic 103024 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr13-867 chr13 23609363 23609573 + 13.6 0.000 intron (NM_001354985, intron 3 of 8) intron (NM_001354985, intron 3 of 8) 30108 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr12-1473 chr12 7498940 7499150 + 13.6 0.000 exon (NM_004244, exon 4 of 17) exon (NM_004244, exon 4 of 17) 4732 NR_163255 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding chr6-1291 chr6 135936611 135936821 + 13.6 0.000 intron (NM_018945, intron 1 of 12) intron (NM_018945, intron 1 of 12) 85015 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr4-1393 chr4 174294839 174295049 + 13.6 0.000 intron (NM_001145314, intron 1 of 10) SVA_D|Retroposon|SVA -10693 NM_012180 26269 Hs.76917 NM_012180 ENSG00000164117 FBXO8 DC10|FBS|FBX8 F-box protein 8 protein-coding chr2-3908 chr2 47269862 47270072 + 13.6 0.000 intron (NR_110207, intron 1 of 2) L2c|LINE|L2 -65348 NR_001568 618 NR_001568 ENSG00000236824 BCYRN1 BC200|BC200a|LINC00004|NCRNA00004 brain cytoplasmic RNA 1 ncRNA chrX-1242 chrX 95513513 95513723 + 13.6 0.000 Intergenic Intergenic -450392 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr7-5259 chr7 19677440 19677650 + 13.6 0.000 Intergenic MER44D|DNA|TcMar-Tigger 27891 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr5-1562 chr5 112259727 112259937 + 13.6 0.000 intron (NM_001347887, intron 8 of 23) intron (NM_001347887, intron 8 of 23) 31549 NR_110559 101927023 Hs.571002 NR_110559 ENSG00000251076 LOC101927023 - uncharacterized LOC101927023 ncRNA chr5-4813 chr5 59025877 59026087 + 13.6 0.000 intron (NM_006203, intron 6 of 14) intron (NM_006203, intron 6 of 14) 13494 NM_001197222 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5-2349 chr5 74630766 74630976 + 13.6 0.000 intron (NR_046318, intron 1 of 1) intron (NR_046318, intron 1 of 1) -9152 NM_001292004 3074 Hs.69293 NM_000521 ENSG00000049860 HEXB ENC-1AS|HEL-248|HEL-S-111 hexosaminidase subunit beta protein-coding chr10-1114 chr10 104255777 104255987 + 13.6 0.000 intron (NM_001191002, intron 2 of 4) intron (NM_001191002, intron 2 of 4) 990 NM_004832 9446 Hs.190028 NM_004832 ENSG00000148834 GSTO1 GSTO 1-1|GSTTLp28|HEL-S-21|P28|SPG-R glutathione S-transferase omega 1 protein-coding chr20-1967 chr20 36298534 36298744 + 13.6 0.000 Intergenic MIRb|SINE|MIR -7700 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chrX-790 chrX 51006450 51006660 + 13.6 0.000 Intergenic Intergenic 95820 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr1-6906 chr1 147273714 147273924 + 13.6 0.000 intron (NR_145686, intron 12 of 22) intron (NR_145686, intron 12 of 22) 30677 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr2-3758 chr2 7692807 7693017 + 13.6 0.000 Intergenic Intergenic 206743 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr12-756 chr12 57549981 57550191 + 13.6 0.000 promoter-TSS (NM_001354705) promoter-TSS (NM_001354705) 42 NM_004984 3798 Hs.151219 NM_004984 ENSG00000155980 KIF5A ALS25|D12S1889|MY050|NEIMY|NKHC|SPG10 kinesin family member 5A protein-coding chr17-2063 chr17 64614479 64614689 + 13.6 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 47723 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr5-2252 chr5 15821613 15821823 + 13.6 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -113464 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr6-1908 chr6 19719623 19719833 + 13.6 0.000 Intergenic Intergenic 85031 NR_134651 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr2-6160 chr2 238646144 238646354 + 13.6 0.000 Intergenic Intergenic -90750 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr17-3616 chr17 1786992 1787202 + 13.6 0.000 intron (NM_052928, intron 6 of 10) intron (NM_052928, intron 6 of 10) 15426 NM_001329905 5176 Hs.532768 NM_002615 ENSG00000132386 SERPINF1 EPC-1|OI12|OI6|PEDF|PIG35 serpin family F member 1 protein-coding chr20-1467 chr20 2243993 2244203 + 13.6 0.000 Intergenic MER68|LTR|ERVL 37170 NR_161305 388780 Hs.132163 NR_161305 LOC388780 - uncharacterized LOC388780 ncRNA chr6-1007 chr6 34696992 34697202 + 13.6 0.000 promoter-TSS (NM_024294) promoter-TSS (NM_024294) 152 NR_134626 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr11-2650 chr11 58900861 58901071 + 13.6 0.000 Intergenic Intergenic -4432 NM_001354699 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr17-3762 chr17 32111489 32111699 + 13.6 0.000 Intergenic Intergenic -30860 NM_001288758 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding chr4-3910 chr4 149942564 149942774 + 13.6 0.000 Intergenic MER21C|LTR|ERVL -126826 NM_001363509 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr16-1733 chr16 67901023 67901233 + 13.6 0.000 intron (NM_006742, intron 1 of 2) intron (NM_006742, intron 1 of 2) 7874 NM_006742 5681 Hs.513683 NM_006742 ENSG00000159792 PSKH1 - protein serine kinase H1 protein-coding chr16-1366 chr16 4116669 4116879 + 13.6 0.000 promoter-TSS (NM_001116) promoter-TSS (NM_001116) -332 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr14-917 chr14 90399650 90399860 + 13.6 0.000 intron (NM_001363670, intron 1 of 5) AmnSINE1|SINE|5S-Deu-L2 1505 NM_001363670 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAM2|CAM3|CAMB|CAMC|CAMI|CAMIII|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr5-1387 chr5 116579142 116579352 + 13.6 0.000 intron (NR_147170, intron 1 of 2) L2c|LINE|L2 -4424 NM_020796 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding chr1-2550 chr1 10774551 10774761 + 13.6 0.000 intron (NM_001079843, intron 1 of 20) intron (NM_001079843, intron 1 of 20) 21990 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr20-342 chr20 35601558 35601768 + 13.6 0.000 non-coding (NR_119376, exon 14 of 43) non-coding (NR_119376, exon 14 of 43) 5899 NR_119376 80307 Hs.72222 NR_001442 ENSG00000088340 FER1L4 C20orf124 fer-1 like family member 4 (pseudogene) pseudo chr14-527 chr14 75176653 75176863 + 13.6 0.000 promoter-TSS (NM_006827) promoter-TSS (NM_006827) -146 NM_006827 10972 Hs.74137 NM_006827 ENSG00000170348 TMED10 P24(DELTA)|S31I125|S31III125|TMP21|Tmp-21-I|p23|p24d1 transmembrane p24 trafficking protein 10 protein-coding chr16-2487 chr16 88610134 88610344 + 13.6 0.000 intron (NM_001294340, intron 8 of 18) intron (NM_001294340, intron 8 of 18) -28333 NM_013278 27189 Hs.278911 NM_013278 ENSG00000124391 IL17C CX2|IL-17C interleukin 17C protein-coding chr14-1614 chr14 102171303 102171513 + 13.6 0.000 intron (NM_001353659, intron 1 of 1) AluJr|SINE|Alu 31511 NM_001353661 91833 Hs.36859 NM_144574 ENSG00000140153 WDR20 DMR WD repeat domain 20 protein-coding chr1-4557 chr1 72547002 72547212 + 13.6 0.000 Intergenic Intergenic -264568 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr10-2012 chr10 63738366 63738576 + 13.6 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR -216581 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr16-2807 chr16 66377615 66377825 + 13.6 0.000 intron (NM_001795, intron 1 of 11) intron (NM_001795, intron 1 of 11) 11029 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr4-2141 chr4 77922231 77922441 + 13.6 0.000 intron (NM_020236, intron 7 of 8) L2a|LINE|L2 59506 NM_020236 65008 Hs.532019 NM_020236 ENSG00000169288 MRPL1 BM022|L1MT|MRP-L1 mitochondrial ribosomal protein L1 protein-coding chr13-1139 chr13 29589996 29590206 + 13.6 0.000 intron (NM_003045, intron 1 of 12) intron (NM_003045, intron 1 of 12) 5587 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr16-2630 chr16 9119667 9119877 + 13.6 0.000 3' UTR (NM_014117, exon 4 of 4) 3' UTR (NM_014117, exon 4 of 4) 28128 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr5-3640 chr5 140526340 140526550 + 13.6 0.000 intron (NM_020690, intron 26 of 35) intron (NM_020690, intron 26 of 35) -21217 NM_003732 8637 Hs.594084 NM_003732 ENSG00000243056 EIF4EBP3 4E-BP3|4EBP3 eukaryotic translation initiation factor 4E binding protein 3 protein-coding chr11-2822 chr11 124481925 124482135 + 13.6 0.000 Intergenic Intergenic -40945 NM_012378 26493 Hs.351822 NM_012378 ENSG00000197125 OR8B8 TPCR85 olfactory receptor family 8 subfamily B member 8 protein-coding chr11-1976 chr11 14414871 14415081 + 13.6 0.000 Intergenic Intergenic -50470 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr8-2018 chr8 102053340 102053550 + 13.6 0.000 intron (NM_001040624, intron 1 of 7) intron (NM_001040624, intron 1 of 7) 69013 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr1-4872 chr1 32235566 32235776 + 13.6 0.000 intron (NR_026850, intron 3 of 6) intron (NR_026850, intron 3 of 6) 6039 NR_026850 339483 Hs.471067 NR_026850 MTMR9LP MTMR9L myotubularin related protein 9 like, pseudogene pseudo chr9-3194 chr9 130419527 130419737 + 13.6 0.000 intron (NM_001291815, intron 86 of 97) intron (NM_001291815, intron 86 of 97) -25075 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr8-925 chr8 21920395 21920605 + 13.6 0.000 intron (NM_015024, intron 1 of 27) intron (NM_015024, intron 1 of 27) 838 NR_156173 23039 Hs.172685 NM_015024 ENSG00000130227 XPO7 EXP7|RANBP16 exportin 7 protein-coding chr12-2296 chr12 116121547 116121757 + 13.6 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) 27002 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr6-1988 chr6 3997321 3997531 + 13.6 0.000 Intergenic Intergenic -23874 NR_146784 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr4-1983 chr4 184417895 184418105 + 13.6 0.000 intron (NM_002199, intron 5 of 8) intron (NM_002199, intron 5 of 8) -35694 NR_125933 102723766 Hs.432281 NR_125933 ENSG00000249096 LINC02362 - long intergenic non-protein coding RNA 2362 ncRNA chr14-861 chr14 51430720 51430930 + 13.6 0.000 Intergenic Intergenic -33690 NR_146549 105370496 Hs.578228 NR_146549 ENSG00000258808 LINC02310 - long intergenic non-protein coding RNA 2310 ncRNA chr1-3520 chr1 186621054 186621264 + 13.6 0.000 Intergenic MLT2F|LTR|ERVL 59264 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding chr11-3255 chr11 74105507 74105717 + 13.6 0.000 intron (NM_001286577, intron 13 of 32) intron (NM_001286577, intron 13 of 32) 65390 NM_015531 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 domain containing 3 centriole elongation regulator protein-coding chr9-1753 chr9 130051993 130052203 + 13.6 0.000 Intergenic Intergenic -1608 NM_001287346 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chr1-2734 chr1 19758452 19758662 + 13.6 0.000 intron (NM_001349112, intron 5 of 14) intron (NM_001349112, intron 5 of 14) 40792 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr11-1982 chr11 27452046 27452256 + 13.6 0.000 intron (NM_018490, intron 1 of 17) MIR3|SINE|MIR -19580 NR_131169 105376671 Hs.568999 NR_131169 ENSG00000254862 LOC105376671 lnc-BBOX1-1 uncharacterized LOC105376671 ncRNA chr8-2538 chr8 26703980 26704190 + 13.6 0.000 Intergenic L1MC2|LINE|L1 125680 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr17-2719 chr17 68020264 68020474 + 13.6 0.000 Intergenic MER5B|DNA|hAT-Charlie -15366 NM_002266 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr2-9318 chr2 224659804 224660014 + 13.6 0.000 Intergenic MER51B|LTR|ERV1 -74512 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr12-1627 chr12 110384601 110384811 + 13.6 0.000 intron (NM_001137664, intron 6 of 9) intron (NM_001137664, intron 6 of 9) 19024 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr5-1601 chr5 34640224 34640434 + 13.6 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -15999 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5-1810 chr5 74042936 74043146 + 13.6 0.000 Intergenic Intergenic 229495 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr9-1717 chr9 111053156 111053366 + 13.6 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -14263 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr17-1555 chr17 7718142 7718352 + 13.6 0.000 5' UTR (NM_020877, exon 1 of 86) 5' UTR (NM_020877, exon 1 of 86) 503 NM_001303270 146754 Hs.367649 NM_020877 ENSG00000183914 DNAH2 DNAHC2|DNHD3 dynein axonemal heavy chain 2 protein-coding chr5-832 chr5 36744712 36744922 + 13.6 0.000 Intergenic Intergenic 131877 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA chr5-4119 chr5 79107132 79107342 + 13.6 0.000 Intergenic MIRb|SINE|MIR -4572 NM_001713 635 Hs.80756 NM_001713 ENSG00000145692 BHMT BHMT1|HEL-S-61p betaine--homocysteine S-methyltransferase protein-coding chr3-1232 chr3 113305242 113305452 + 13.6 0.000 intron (NM_001164496, intron 30 of 34) intron (NM_001164496, intron 30 of 34) 93231 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr10-1543 chr10 93386932 93387142 + 13.6 0.000 intron (NM_013451, intron 19 of 53) LTR104_Mam|LTR|Gypsy 95297 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr7-3018 chr7 67042928 67043138 + 13.6 0.000 intron (NR_134540, intron 7 of 14) MIRb|SINE|MIR 46200 NM_018264 55253 Hs.520917 NM_018264 ENSG00000198874 TYW1 RSAFD1|TYW1A|YPL207W tRNA-yW synthesizing protein 1 homolog protein-coding chr7-3728 chr7 66757932 66758142 + 13.6 0.000 intron (NM_001287061, intron 1 of 8) intron (NM_001287061, intron 1 of 8) 2155 NM_001287061 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr5-2422 chr5 116281413 116281623 + 13.6 0.000 intron (NM_001308080, intron 5 of 6) intron (NM_001308080, intron 5 of 6) 25775 NR_162144 113219464 NR_162144 MIR12130 - microRNA 12130 ncRNA chr8-1214 chr8 99498745 99498955 + 13.6 0.000 intron (NM_017890, intron 25 of 61) intron (NM_017890, intron 25 of 61) 37880 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA chr15-2204 chr15 90400995 90401205 + 13.6 0.000 intron (NM_003870, intron 2 of 37) intron (NM_003870, intron 2 of 37) 12858 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr17-4069 chr17 78908015 78908225 + 13.6 0.000 intron (NM_003255, intron 1 of 4) AluJb|SINE|Alu -4919 NM_001243541 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr10-3046 chr10 125776646 125776856 + 13.6 0.000 promoter-TSS (NM_147191) promoter-TSS (NM_147191) -930 NM_147191 118856 Hs.314141 NM_147191 ENSG00000154485 MMP21 HTX7|MMP-21 matrix metallopeptidase 21 protein-coding chrX-356 chrX 108516233 108516443 + 13.6 0.000 intron (NM_033380, intron 1 of 50) intron (NM_033380, intron 1 of 50) 76500 NM_033380 1287 Hs.369089 NM_000495 ENSG00000188153 COL4A5 ASLN|ATS|ATS1|CA54 collagen type IV alpha 5 chain protein-coding chr2-2424 chr2 38685742 38685952 + 13.6 0.000 intron (NM_138801, intron 3 of 6) AluSz|SINE|Alu 19733 NM_138801 130589 Hs.435012 NM_138801 ENSG00000143891 GALM BLOCK25|GLAT|HEL-S-63p|IBD1 galactose mutarotase protein-coding chr12-570 chr12 51424819 51425029 + 13.6 0.000 promoter-TSS (NM_001258403) promoter-TSS (NM_001258403) 93 NM_001039960 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr1-7063 chr1 182674673 182674883 + 13.6 0.000 Intergenic MIR1_Amn|SINE|MIR -1846 NM_001102450 85397 Hs.20982 NM_033345 ENSG00000135824 RGS8 - regulator of G protein signaling 8 protein-coding chr6-2449 chr6 8860640 8860850 + 13.6 0.000 Intergenic Intergenic 208536 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr15-2175 chr15 81071263 81071473 + 13.6 0.000 Intergenic Intergenic -62902 NM_173528 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr16-1008 chr16 67944138 67944348 + 13.6 0.000 promoter-TSS (NM_000229) promoter-TSS (NM_000229) -123 NM_000229 3931 Hs.387239 NM_000229 ENSG00000213398 LCAT - lecithin-cholesterol acyltransferase protein-coding chr11-1436 chr11 66403767 66403977 + 13.6 0.000 Intergenic ERVL-E-int|LTR|ERVL -17132 NM_001318804 266743 Hs.256036 NM_178864 ENSG00000174576 NPAS4 Le-PAS|NXF|PASD10|bHLHe79 neuronal PAS domain protein 4 protein-coding chr13-1439 chr13 51916350 51916560 + 13.6 0.000 Intergenic MIR|SINE|MIR 54486 NM_001346075 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr11-1812 chr11 3417005 3417215 + 13.6 0.000 Intergenic Intergenic -25195 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr1-3326 chr1 19607082 19607292 + 13.6 0.000 promoter-TSS (NR_077246) promoter-TSS (NR_077246) -620 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo chr8-2462 chr8 127903087 127903297 + 13.6 0.000 intron (NR_003367, intron 2 of 8) L1PA16|LINE|L1 45531 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr3-2923 chr3 52797748 52797958 + 13.6 0.000 exon (NM_002217, exon 6 of 22) exon (NM_002217, exon 6 of 22) 3085 NM_002217 3699 Hs.76716 NM_002217 ENSG00000162267 ITIH3 H3P|ITI-HC3|SHAP inter-alpha-trypsin inhibitor heavy chain 3 protein-coding chr3-589 chr3 52278727 52278937 + 13.6 0.000 promoter-TSS (NM_025222) promoter-TSS (NM_025222) -183 NM_025222 80335 Hs.194110 NM_025222 ENSG00000164091 WDR82 MST107|MSTP107|PRO2730|PRO34047|SWD2|TMEM113|WDR82A WD repeat domain 82 protein-coding chr21-695 chr21 27108227 27108437 + 13.6 0.000 Intergenic Intergenic -141244 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr18-581 chr18 11325414 11325624 + 13.6 0.000 Intergenic Intergenic -128959 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr11-2362 chr11 117752860 117753070 + 13.6 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 44251 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr14-1159 chr14 50594623 50594833 + 13.6 0.000 intron (NM_015915, intron 5 of 13) AluJb|SINE|Alu 34703 NM_181598 51062 Hs.584905 NM_015915 ENSG00000198513 ATL1 AD-FSP|FSP1|GBP3|HSN1D|SPG3|SPG3A|atlastin1 atlastin GTPase 1 protein-coding chr2-3678 chr2 190205776 190205986 + 13.6 0.000 intron (NM_198047, intron 12 of 12) intron (NM_198047, intron 12 of 12) 25018 NM_001042519 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding chr16-1278 chr16 67847718 67847928 + 13.6 0.000 promoter-TSS (NM_025082) promoter-TSS (NM_025082) -130 NM_025082 80152 Hs.288382 NM_025082 ENSG00000102901 CENPT C16orf56|CENP-T centromere protein T protein-coding chr22-898 chr22 21022549 21022759 + 13.6 0.000 intron (NM_001349876, intron 3 of 10) intron (NM_001349876, intron 3 of 10) 7494 NM_001349876 9127 Hs.113275 NM_005446 ENSG00000099957 P2RX6 P2RXL1|P2X6|P2XM purinergic receptor P2X 6 protein-coding chr1-3758 chr1 1876013 1876223 + 13.6 0.000 intron (NM_001282538, intron 1 of 9) MLT1C|LTR|ERVL-MaLR 14969 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr8-2268 chr8 91118845 91119055 + 13.6 0.000 intron (NR_148895, intron 2 of 10) L2a|LINE|L2 16331 NM_001129890 100130742 Hs.733070 NM_001129890 ENSG00000214954 LRRC69 - leucine rich repeat containing 69 protein-coding chr14-663 chr14 61564652 61564862 + 13.6 0.000 non-coding (NR_110416, exon 4 of 5) non-coding (NR_110416, exon 4 of 5) 5437 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr12-1882 chr12 56724524 56724734 + 13.6 0.000 intron (NM_001320193, intron 1 of 7) intron (NM_001320193, intron 1 of 7) 670 NM_001113201 4666 Hs.505735 NM_005594 ENSG00000196531 NACA HSD48|NAC-alpha|NACA1|skNAC nascent polypeptide associated complex subunit alpha protein-coding chr7-2290 chr7 51078021 51078231 + 13.6 0.000 intron (NM_001287438, intron 7 of 7) MLT1L|LTR|ERVL-MaLR 238683 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr10-1831 chr10 14975820 14976030 + 13.6 0.000 intron (NR_147060, intron 1 of 2) SATR1|Satellite|Satellite 16537 NM_001080836 644890 Hs.257249 NM_001080836 ENSG00000197889 MEIG1 SPATA39|bA2K17.3 meiosis/spermiogenesis associated 1 protein-coding chr5-3592 chr5 95718346 95718556 + 13.6 0.000 intron (NM_001349303, intron 2 of 8) L2|LINE|L2 -12885 NM_014899 22836 Hs.445030 NM_014899 ENSG00000164292 RHOBTB3 - Rho related BTB domain containing 3 protein-coding chr9-1111 chr9 6080200 6080410 + 13.6 0.000 Intergenic HERVI-int|LTR|ERV1 -64681 NM_012416 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr1-1985 chr1 244730580 244730790 + 13.6 0.000 Intergenic CpG 77559 NM_001297746 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr7-3350 chr7 92824647 92824857 + 13.6 0.000 intron (NM_001259, intron 2 of 7) L2b|LINE|L2 9207 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr1-4679 chr1 220410743 220410953 + 13.6 0.000 Intergenic Intergenic -117288 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr6-1504 chr6 148044474 148044684 + 13.6 0.000 Intergenic Intergenic -227749 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr16-1740 chr16 70754712 70754922 + 13.6 0.000 promoter-TSS (NR_034083) promoter-TSS (NR_034083) -278 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr9-486 chr9 136728193 136728403 + 13.6 0.000 promoter-TSS (NR_024542) promoter-TSS (NR_024542) -114 NR_003672 84973 Hs.495480 NR_003672 ENSG00000233016 SNHG7 NCRNA00061 small nucleolar RNA host gene 7 ncRNA chr3-2634 chr3 4759577 4759787 + 13.6 0.000 intron (NM_001168272, intron 43 of 60) intron (NM_001168272, intron 43 of 60) -8092 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr20-951 chr20 33909597 33909807 + 13.6 0.000 Intergenic MER65D|LTR|ERV1 -84209 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr3-1067 chr3 52493795 52494005 + 13.6 0.000 TTS (NM_007184) TTS (NM_007184) -1438 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr16-1376 chr16 57277602 57277812 + 13.6 0.000 intron (NM_015993, intron 1 of 3) intron (NM_015993, intron 1 of 3) 6965 NM_015993 51090 Hs.632215 NM_015993 ENSG00000102934 PLLP PMLP|TM4SF11 plasmolipin protein-coding chr9-1282 chr9 15552374 15552584 + 13.6 0.000 promoter-TSS (NM_173550) promoter-TSS (NM_173550) -564 NM_173550 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr11-5873 chr11 10968438 10968648 + 13.6 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 110326 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr5-4996 chr5 81409867 81410077 + 13.6 0.000 Intergenic Intergenic -15838 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr8-978 chr8 117415475 117415685 + 13.6 0.000 Intergenic Intergenic -105133 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr11-2738 chr11 26573132 26573342 + 13.6 0.000 promoter-TSS (NM_145650) promoter-TSS (NM_145650) -974 NM_001135092 143662 Hs.407152 NM_145650 ENSG00000169550 MUC15 MUC-15|PAS3|PASIII mucin 15, cell surface associated protein-coding chr5-3193 chr5 79236915 79237125 + 13.6 0.000 exon (NM_152405, exon 1 of 11) exon (NM_152405, exon 1 of 11) 889 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr6-757 chr6 110873941 110874151 + 13.6 0.000 promoter-TSS (NM_001634) promoter-TSS (NM_001634) -738 NR_109768 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr3-3247 chr3 48041845 48042055 + 13.6 0.000 intron (NM_002375, intron 1 of 18) MER21B|LTR|ERVL 46898 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr9-1959 chr9 78637666 78637876 + 13.6 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 340646 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr11-1489 chr11 128026786 128026996 + 13.6 0.000 Intergenic MER44C|DNA|TcMar-Tigger -181875 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr8-829 chr8 56555783 56555993 + 13.6 0.000 intron (NR_038236, intron 1 of 2) L4_A_Mam|LINE|RTE-X 3935 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr6-1398 chr6 116251766 116251976 + 13.6 0.000 3' UTR (NM_021648, exon 1 of 1) 3' UTR (NM_021648, exon 1 of 1) 2204 NM_021648 23270 Hs.284141 NM_021648 ENSG00000187189 TSPYL4 dJ486I3.2 TSPY like 4 protein-coding chr3-3980 chr3 53768067 53768277 + 13.6 0.000 intron (NM_001128839, intron 30 of 45) intron (NM_001128839, intron 30 of 45) 78247 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr10-2332 chr10 66985427 66985637 + 13.6 0.000 intron (NR_111911, intron 1 of 6) LTR33|LTR|ERVL 26621 NR_111911 101928961 Hs.687014 NR_111911 LOC101928961 - uncharacterized LOC101928961 ncRNA chr19-2074 chr19 18500834 18501044 + 13.6 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 21131 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr2-3357 chr2 234075512 234075722 + 13.6 0.000 intron (NM_006944, intron 7 of 7) intron (NM_006944, intron 7 of 7) 24915 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr14-722 chr14 55271141 55271351 + 13.6 0.000 promoter-TSS (NM_017943) promoter-TSS (NM_017943) -175 NM_017943 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr2-4679 chr2 216341381 216341591 + 13.6 0.000 intron (NM_020814, intron 1 of 3) intron (NM_020814, intron 1 of 3) 30997 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr7-1147 chr7 78149914 78150124 + 13.6 0.000 intron (NM_001301128, intron 15 of 20) intron (NM_001301128, intron 15 of 20) -197223 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr19-1605 chr19 35352815 35353025 + 13.6 0.000 TTS (NM_005303) TTS (NM_005303) 1378 NM_005303 2864 Hs.248127 NM_005303 ENSG00000126266 FFAR1 FFA1R|GPCR40|GPR40 free fatty acid receptor 1 protein-coding chr2-2421 chr2 37571167 37571377 + 13.6 0.000 Intergenic Intergenic 100927 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr15-627 chr15 66707464 66707674 + 13.6 0.000 intron (NM_005585, intron 1 of 3) intron (NM_005585, intron 1 of 3) 5333 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr15-1230 chr15 67117479 67117689 + 13.6 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -8132 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr18-534 chr18 79476719 79476929 + 13.6 0.000 intron (NM_001278672, intron 8 of 8) intron (NM_001278672, intron 8 of 8) 76525 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr1-2758 chr1 58815176 58815386 + 13.6 0.000 intron (NR_108106, intron 1 of 1) CpG 30130 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr7-5327 chr7 26953093 26953303 + 13.6 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -88608 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr3-2292 chr3 108180397 108180607 + 13.6 0.000 intron (NM_018010, intron 6 of 10) intron (NM_018010, intron 6 of 10) 41922 NM_018010 55081 Hs.412196 NM_018010 ENSG00000114446 IFT57 ESRRBL1|HIPPI|MHS4R2|OFD18 intraflagellar transport 57 protein-coding chr14-871 chr14 78836883 78837093 + 13.6 0.000 intron (NM_004796, intron 7 of 16) intron (NM_004796, intron 7 of 16) -362994 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr2-1489 chr2 197310837 197311047 + 13.6 0.000 promoter-TSS (NM_001195144) promoter-TSS (NM_001195144) -162 NM_153697 91526 Hs.432706 NM_153697 ENSG00000065413 ANKRD44 PP6-ARS-B ankyrin repeat domain 44 protein-coding chr2-2042 chr2 150339870 150340080 + 13.6 0.000 Intergenic Intergenic -82968 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr5-1644 chr5 167504547 167504757 + 13.6 0.000 intron (NM_001122679, intron 3 of 29) intron (NM_001122679, intron 3 of 29) -69007 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr8-1306 chr8 101282695 101282905 + 13.6 0.000 Intergenic LTR16E1|LTR|ERVL -76736 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr14-506 chr14 59483903 59484113 + 13.6 0.000 promoter-TSS (NM_001331159) promoter-TSS (NM_001331159) 347 NR_138574 112849 Hs.729061 NM_144581 ENSG00000126790 L3HYPDH C14orf149 trans-L-3-hydroxyproline dehydratase protein-coding chr8-542 chr8 140545014 140545224 + 13.6 0.000 intron (NM_001164623, intron 13 of 17) intron (NM_001164623, intron 13 of 17) 33123 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr3-1672 chr3 184803326 184803536 + 13.6 0.000 Intergenic Intergenic -8712 NM_001009921 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr16-1256 chr16 14307779 14307989 + 13.6 0.000 intron (NR_132983, intron 1 of 1) intron (NR_132983, intron 1 of 1) -1401 NR_029854 100126355 NR_029854 ENSG00000199130 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a|mir-365a microRNA 365a ncRNA chrX-818 chrX 93388377 93388587 + 13.6 0.000 Intergenic Intergenic 285096 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr12-4670 chr12 47537837 47538047 + 13.6 0.000 Intergenic Intergenic 122934 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr5-728 chr5 140246521 140246731 + 13.6 0.000 intron (NM_002622, intron 3 of 3) intron (NM_002622, intron 3 of 3) 56475 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr4-1636 chr4 86334382 86334592 + 13.6 0.000 intron (NM_001363657, intron 2 of 13) L2a|LINE|L2 20157 NM_001318067 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr1-3653 chr1 87204042 87204252 + 13.6 0.000 Intergenic Intergenic -8522 NM_001290053 101927844 Hs.694591 NM_001290053 LINC02801 - long intergenic non-protein coding RNA 2801 protein-coding chr3-2574 chr3 114365369 114365579 + 13.6 0.000 intron (NR_038993, intron 4 of 8) intron (NR_038993, intron 4 of 8) 13663 NR_038993 100131117 Hs.122417 NR_038993 ENSG00000241560 ZBTB20-AS1 - ZBTB20 antisense RNA 1 ncRNA chr2-1604 chr2 160208135 160208345 + 13.6 0.000 Intergenic Intergenic -7927 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr13-1103 chr13 110002358 110002568 + 13.6 0.000 Intergenic Intergenic -50822 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr3-2328 chr3 132536068 132536278 + 13.6 0.000 intron (NM_001329126, intron 56 of 56) intron (NM_001329126, intron 56 of 56) -61097 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr3-2415 chr3 194475124 194475334 + 13.6 0.000 intron (NM_001367549, intron 2 of 33) intron (NM_001367549, intron 2 of 33) -6990 NM_024524 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr18-1045 chr18 9038225 9038435 + 13.6 0.000 Intergenic LTR54B|LTR|ERV1 -64369 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr5-2723 chr5 118364823 118365033 + 13.6 0.000 intron (NR_104610, intron 9 of 9) intron (NR_104610, intron 9 of 9) 82354 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr12-816 chr12 132548117 132548327 + 13.6 0.000 intron (NM_001142641, intron 5 of 16) intron (NM_001142641, intron 5 of 16) -33775 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr1-3251 chr1 203369235 203369445 + 13.6 0.000 Intergenic Intergenic -18218 NM_002023 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr3-1742 chr3 150235905 150236115 + 13.6 0.000 Intergenic Intergenic -2509 NR_110168 101927992 Hs.534682 NR_110167 ENSG00000244541 LINC01213 - long intergenic non-protein coding RNA 1213 ncRNA chr7-2677 chr7 13821359 13821569 + 13.6 0.000 Intergenic Intergenic 165050 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr19-2038 chr19 2887604 2887814 + 13.6 0.000 Intergenic Intergenic -13219 NM_173480 126295 Hs.591378 NM_173480 ENSG00000171970 ZNF57 ZNF424 zinc finger protein 57 protein-coding chr2-2550 chr2 213995378 213995588 + 13.6 0.000 intron (NR_047660, intron 11 of 14) MamGypLTR1a|LTR|Gypsy 237416 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr9-3321 chr9 92175447 92175657 + 13.6 0.000 Intergenic Intergenic 15604 NM_001350291 138652 Hs.742918 NM_001350291 PRSS47 - serine protease 47 protein-coding chr1-4597 chr1 145720636 145720846 + 13.6 0.000 intron (NM_007053, intron 1 of 5) MIRb|SINE|MIR 1242 NR_103845 11126 Hs.488237 NM_007053 ENSG00000117281 CD160 BY55|NK1|NK28 CD160 molecule protein-coding chr14-1145 chr14 25146991 25147201 + 13.6 0.000 Intergenic LTR50|LTR|ERVL -96799 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr17-3516 chr17 62668275 62668485 + 13.6 0.000 intron (NM_006039, intron 6 of 29) (AAAT)n|Simple_repeat|Simple_repeat -37826 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr19-1441 chr19 5705417 5705627 + 13.6 0.000 intron (NM_001276479, intron 9 of 18) MIRc|SINE|MIR 14624 NM_004793 9361 Hs.350265 NM_004793 ENSG00000196365 LONP1 CODASS|LON|LONP|LonHS|PIM1|PRSS15|hLON lon peptidase 1, mitochondrial protein-coding chr1-7200 chr1 214526531 214526741 + 13.6 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 24966 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr1-10143 chr1 106937187 106937397 + 13.6 0.000 Intergenic Intergenic 119053 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chrX-1417 chrX 30653972 30654182 + 13.6 0.000 intron (NM_001128127, intron 1 of 19) intron (NM_001128127, intron 1 of 19) 718 NM_203391 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr1-8668 chr1 209398674 209398884 + 13.6 0.000 Intergenic Intergenic 26724 NR_146491 101929476 Hs.568721 NR_146491 LINC01698 - long intergenic non-protein coding RNA 1698 ncRNA chr12-1418 chr12 47737315 47737525 + 13.6 0.000 3' UTR (NM_001098531, exon 28 of 28) 3' UTR (NM_001098531, exon 28 of 28) -11930 NM_001172440 8909 Hs.997 NM_006025 ENSG00000111405 ENDOU P11|PP11|PRSS26 endonuclease, poly(U) specific protein-coding chr2-2425 chr2 38702518 38702728 + 13.6 0.000 intron (NM_138801, intron 4 of 6) intron (NM_138801, intron 4 of 6) 36509 NM_138801 130589 Hs.435012 NM_138801 ENSG00000143891 GALM BLOCK25|GLAT|HEL-S-63p|IBD1 galactose mutarotase protein-coding chr4-1105 chr4 7740930 7741140 + 13.6 0.000 3' UTR (NM_020777, exon 27 of 27) 3' UTR (NM_020777, exon 27 of 27) -13055 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr1-2331 chr1 204359620 204359830 + 13.6 0.000 5' UTR (NM_014935, exon 1 of 23) 5' UTR (NM_014935, exon 1 of 23) 204 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr10-1659 chr10 112535406 112535616 + 13.6 0.000 intron (NM_001365712, intron 5 of 8) intron (NM_001365712, intron 5 of 8) -87908 NM_001351082 64429 Hs.196990 NM_022494 ENSG00000023041 ZDHHC6 DHHC-6|ZNF376 zinc finger DHHC-type containing 6 protein-coding chr15-963 chr15 43292557 43292767 + 13.6 0.000 intron (NM_052955, intron 3 of 12) intron (NM_052955, intron 3 of 12) 9593 NM_052955 116179 Hs.164661 NM_052955 ENSG00000159495 TGM7 TGMZ transglutaminase 7 protein-coding chr18-988 chr18 12321073 12321283 + 13.6 0.000 intron (NM_001303528, intron 4 of 4) L1ME4b|LINE|L1 12937 NM_032525 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr6-1992 chr6 10374217 10374427 + 13.6 0.000 Intergenic L2|LINE|L2 -30180 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr5-1452 chr5 40172052 40172262 + 13.6 0.000 Intergenic Intergenic 119866 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr5-1524 chr5 157464505 157464715 + 13.6 0.000 intron (NM_001172292, intron 2 of 4) L2c|LINE|L2 -4510 NR_136205 102724404 Hs.570889 NR_136204 LOC102724404 - uncharacterized LOC102724404 ncRNA chr2-4931 chr2 168814125 168814335 + 13.6 0.000 intron (NM_001171632, intron 2 of 14) intron (NM_001171632, intron 2 of 14) 11633 NM_052946 115677 Hs.189780 NM_052946 ENSG00000163072 NOSTRIN DaIP2 nitric oxide synthase trafficking protein-coding chr2-2439 chr2 54457646 54457856 + 13.6 0.000 intron (NM_003128, intron 1 of 35) intron (NM_003128, intron 1 of 35) 1424 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr2-1847 chr2 217653406 217653616 + 13.6 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 103082 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr20-551 chr20 17536966 17537176 + 13.6 0.000 intron (NM_001278608, intron 3 of 9) intron (NM_001278608, intron 3 of 9) -5692 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr11-1642 chr11 95577827 95578037 + 13.6 0.000 Intergenic MLT1H1-int|LTR|ERVL-MaLR 211850 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr2-1860 chr2 19738948 19739158 + 13.6 0.000 Intergenic Intergenic -129801 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr5-3376 chr5 139968875 139969085 + 13.6 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 74319 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr8-1270 chr8 143485083 143485293 + 13.6 0.000 intron (NM_015117, intron 4 of 11) intron (NM_015117, intron 4 of 11) 21060 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr12-1417 chr12 45966719 45966929 + 13.6 0.000 intron (NM_004719, intron 1 of 14) intron (NM_004719, intron 1 of 14) 23750 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr4-1346 chr4 184815045 184815255 + 13.6 0.000 intron (NM_001995, intron 1 of 20) intron (NM_001995, intron 1 of 20) -2891 NM_001286708 2180 Hs.406678 NM_001995 ENSG00000151726 ACSL1 ACS1|FACL1|FACL2|LACS|LACS1|LACS2 acyl-CoA synthetase long chain family member 1 protein-coding chr5-1629 chr5 126446519 126446729 + 13.6 0.000 intron (NR_146196, intron 1 of 14) (A)n|Simple_repeat|Simple_repeat -18526 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr2-3336 chr2 202871556 202871766 + 13.6 0.000 promoter-TSS (NM_001288623) promoter-TSS (NM_001288623) 105 NM_138468 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr7-3811 chr7 94423943 94424153 + 13.6 0.000 intron (NM_000089, intron 40 of 51) intron (NM_000089, intron 40 of 51) 29487 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr2-5271 chr2 61898907 61899117 + 13.6 0.000 intron (NM_001321781, intron 1 of 2) intron (NM_001321781, intron 1 of 2) -6630 NM_152516 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr7-2513 chr7 43687093 43687303 + 13.6 0.000 intron (NR_163914, intron 1 of 8) intron (NR_163914, intron 1 of 8) 42325 NM_001371307 chr10-2324 chr10 59486959 59487169 + 13.6 0.000 Intergenic Intergenic -123883 NM_001347840 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr18-759 chr18 8961219 8961429 + 13.6 0.000 Intergenic Intergenic -141375 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr12-1850 chr12 46383732 46383942 + 13.6 0.000 promoter-TSS (NR_125381) promoter-TSS (NR_125381) 161 NR_125380 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr20-294 chr20 58692540 58692750 + 13.6 0.000 promoter-TSS (NM_024663) promoter-TSS (NM_024663) -155 NM_024663 79716 Hs.654868 NM_024663 ENSG00000215440 NPEPL1 bA261P9.2 aminopeptidase like 1 protein-coding chr5-1604 chr5 37272655 37272865 + 13.6 0.000 Intergenic LTR40b|LTR|ERVL -23332 NM_023073 65250 Hs.586199 NM_023073 ENSG00000197603 CPLANE1 C5orf42|Hug|JBTS17|OFD6 ciliogenesis and planar polarity effector 1 protein-coding chr17-1476 chr17 80761293 80761503 + 13.6 0.000 intron (NM_020761, intron 6 of 33) intron (NM_020761, intron 6 of 33) 44234 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr17-3478 chr17 44260771 44260981 + 13.6 0.000 intron (NM_000342, intron 4 of 19) intron (NM_000342, intron 4 of 19) 7259 NM_000342 6521 Hs.210751 NM_000342 ENSG00000004939 SLC4A1 AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR solute carrier family 4 member 1 (Diego blood group) protein-coding chr6-1920 chr6 38555107 38555317 + 13.6 0.000 intron (NM_001172418, intron 5 of 10) MamRTE1|LINE|RTE-BovB 40855 NM_001172418 114781 Hs.603858 NM_052893 ENSG00000183826 BTBD9 dJ322I12.1 BTB domain containing 9 protein-coding chr5-2456 chr5 135392380 135392590 + 13.6 0.000 intron (NM_004893, intron 1 of 8) intron (NM_004893, intron 1 of 8) 6753 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr3-1882 chr3 129888730 129888940 + 13.6 0.000 intron (NM_001349271, intron 1 of 4) L1MC3|LINE|L1 4741 NM_001128224 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr3-1045 chr3 187227853 187228063 + 13.6 0.000 intron (NM_001879, intron 11 of 15) intron (NM_001879, intron 11 of 15) -20329 NR_110052 101929106 Hs.640145 NR_110052 ENSG00000198491 LOC101929106 - uncharacterized LOC101929106 ncRNA chr5-838 chr5 55995078 55995288 + 13.6 0.000 promoter-TSS (NR_120480) promoter-TSS (NR_120480) 16 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA chr11-2581 chr11 120471184 120471394 + 13.6 0.000 intron (NM_015313, intron 30 of 40) L1ME2z|LINE|L1 -40457 NM_014619 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr12-3088 chr12 13941150 13941360 + 13.6 0.000 intron (NM_000834, intron 1 of 12) intron (NM_000834, intron 1 of 12) 39101 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr5-1660 chr5 32174861 32175071 + 13.6 0.000 promoter-TSS (NM_022130) promoter-TSS (NM_022130) -647 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr22-891 chr22 18031751 18031961 + 13.6 0.000 intron (NR_024417, intron 1 of 1) intron (NR_024417, intron 1 of 1) 2471 NR_024417 100192420 Hs.589947 NR_024417 ENSG00000235295 LINC01634 - long intergenic non-protein coding RNA 1634 ncRNA chrX-534 chrX 102600350 102600560 + 13.6 0.000 intron (NM_001168482, intron 1 of 2) intron (NM_001168482, intron 1 of 2) 940 NR_146584 100528062 Hs.522729 NM_001199818 ENSG00000286237 ARMCX5-GPRASP2 ARMCX5-GPRASP2-BHLHB9-LINC00630|bHLHb9|p60TRP ARMCX5-GPRASP2 readthrough protein-coding chr14-1215 chr14 87149841 87150051 + 13.6 0.000 Intergenic MER67D|LTR|ERV1 244168 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr10-3194 chr10 91931674 91931884 + 13.6 0.000 intron (NM_003972, intron 1 of 37) intron (NM_003972, intron 1 of 37) 8009 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chr22-899 chr22 21571223 21571433 + 13.6 0.000 intron (NR_046082, intron 1 of 3) intron (NR_046082, intron 1 of 3) 3614 NR_028436 7332 Hs.108104 NM_003347 ENSG00000185651 UBE2L3 E2-F1|L-UBC|UBCH7|UbcM4 ubiquitin conjugating enzyme E2 L3 protein-coding chr4-533 chr4 168816766 168816976 + 13.6 0.000 intron (NM_001166108, intron 10 of 21) (GT)n|Simple_repeat|Simple_repeat -15224 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr20-1200 chr20 9829983 9830193 + 13.6 0.000 intron (NM_020341, intron 1 of 10) intron (NM_020341, intron 1 of 10) 8988 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr13-730 chr13 98930286 98930496 + 13.6 0.000 intron (NM_001366682, intron 2 of 53) intron (NM_001366682, intron 2 of 53) 47673 NM_001366679 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr19-4609 chr19 13033250 13033460 + 13.6 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 8576 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr17-1908 chr17 68474312 68474522 + 13.6 0.000 intron (NM_001278433, intron 1 of 10) intron (NM_001278433, intron 1 of 10) -16893 NM_001320772 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding chr12-2754 chr12 46494504 46494714 + 13.6 0.000 intron (NR_125380, intron 3 of 3) intron (NR_125380, intron 3 of 3) 110502 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr18-743 chr18 57843127 57843337 + 13.6 0.000 Intergenic MIRc|SINE|MIR -39917 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr6-1297 chr6 161353487 161353697 + 13.6 0.000 intron (NM_004562, intron 11 of 11) MER21A|LTR|ERVL -79531 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr11-2348 chr11 89184020 89184230 + 13.6 0.000 intron (NM_000372, intron 1 of 4) intron (NM_000372, intron 1 of 4) 6250 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr17-1492 chr17 15946043 15946253 + 13.6 0.000 intron (NM_000676, intron 1 of 1) CpG 1231 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr13-973 chr13 23723564 23723774 + 13.6 0.000 Intergenic Intergenic 144309 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr2-3471 chr2 166900876 166901086 + 13.6 0.000 intron (NM_152381, intron 1 of 10) L1MDa|LINE|L1 12494 NM_001199143 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr6-2693 chr6 28167050 28167260 + 13.6 0.000 non-coding (NR_103448, exon 4 of 5) non-coding (NR_103448, exon 4 of 5) 5394 NR_103448 651302 Hs.172143 NM_001145129 ENSG00000226314 ZNF192P1 ZNF389|ZNF389P|dJ265C24.4 zinc finger protein 192 pseudogene 1 pseudo chr17-1291 chr17 31475414 31475624 + 13.6 0.000 intron (NM_032932, intron 3 of 14) MIRc|SINE|MIR -12589 NM_001346748 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr2-3149 chr2 189933945 189934155 + 13.6 0.000 Intergenic Intergenic 128679 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr20-822 chr20 62773519 62773729 + 13.6 0.000 TTS (NR_046225) TTS (NR_046225) 3232 NR_046224 100652730 Hs.254951 NR_046224 LINC00659 - long intergenic non-protein coding RNA 659 ncRNA chr7-797 chr7 73683459 73683669 + 13.6 0.000 promoter-TSS (NM_001202560) promoter-TSS (NM_001202560) -33 NM_017528 114049 Hs.647063 NM_017528 ENSG00000071462 BUD23 HASJ4442|HUSSY-3|MERM1|PP3381|WBMT|WBSCR22 BUD23 rRNA methyltransferase and ribosome maturation factor protein-coding chr2-6143 chr2 231452624 231452834 + 13.6 0.000 TTS (NM_005381) TTS (NM_005381) 3207 NR_002921 654321 Hs.674388 NR_002921 ENSG00000206885 SNORA75 SNORA75A|U23 small nucleolar RNA, H/ACA box 75 snoRNA chr20-1762 chr20 50519187 50519397 + 13.6 0.000 intron (NM_001278618, intron 1 of 8) intron (NM_001278618, intron 1 of 8) 8909 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr17-1980 chr17 41910720 41910930 + 13.6 0.000 intron (NM_198830, intron 3 of 27) intron (NM_198830, intron 3 of 27) 8126 NM_001096 47 Hs.387567 NM_001096 ENSG00000131473 ACLY ACL|ATPCL|CLATP ATP citrate lyase protein-coding chr20-659 chr20 51033751 51033961 + 13.6 0.000 Intergenic LTR40b|LTR|ERVL -10749 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr6-2957 chr6 36464290 36464500 + 13.6 0.000 intron (NR_104481, intron 1 of 3) AluJb|SINE|Alu 21395 NM_001286579 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr13-1022 chr13 44720271 44720481 + 13.6 0.000 Intergenic Intergenic 80007 NR_149082 106144541 Hs.578031 NR_149082 LINC00407 - long intergenic non-protein coding RNA 407 ncRNA chr11-4567 chr11 125505509 125505719 + 13.6 0.000 Intergenic Intergenic -9304 NM_022549 9638 Hs.224008 NM_005103 ENSG00000149557 FEZ1 UNC-76 fasciculation and elongation protein zeta 1 protein-coding chr2-1893 chr2 109253174 109253384 + 13.6 0.000 intron (NM_001099289, intron 1 of 9) AluSz|SINE|Alu 60346 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr7-2158 chr7 50497136 50497346 + 13.6 0.000 intron (NM_001242888, intron 6 of 12) intron (NM_001242888, intron 6 of 12) -34518 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr4-495 chr4 10180402 10180612 + 13.6 0.000 Intergenic Intergenic -63708 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr19-1645 chr19 13031663 13031873 + 13.6 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 6989 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr13-892 chr13 40341216 40341426 + 13.6 0.000 Intergenic Intergenic -120819 NR_033877 400123 Hs.577960 NR_033877 ENSG00000215483 LINC00548 - long intergenic non-protein coding RNA 548 ncRNA chr15-1955 chr15 34217700 34217910 + 13.6 0.000 Intergenic Intergenic -7211 NR_147140 51234 Hs.250905 NM_016454 ENSG00000128463 EMC4 PIG17|TMEM85 ER membrane protein complex subunit 4 protein-coding chr7-2109 chr7 14172646 14172856 + 13.6 0.000 intron (NM_001350717, intron 24 of 24) intron (NM_001350717, intron 24 of 24) -181326 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr3-2380 chr3 176469927 176470137 + 13.6 0.000 Intergenic LTR22C2|LTR|ERVK -45071 NR_107017 102465858 NR_107017 ENSG00000283333 MIR7977 hsa-mir-7977 microRNA 7977 ncRNA chr11-1540 chr11 9362682 9362892 + 13.6 0.000 Intergenic Intergenic -21865 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chr4-2178 chr4 106048633 106048843 + 13.6 0.000 intron (NM_001290768, intron 26 of 26) intron (NM_001290768, intron 26 of 26) -26260 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chr12-1256 chr12 49201881 49202091 + 13.6 0.000 Intergenic Intergenic -12662 NM_001270399 7846 Hs.654422 NM_006009 ENSG00000167552 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin alpha 1a protein-coding chr6-1292 chr6 149036993 149037203 + 13.6 0.000 intron (NM_005715, intron 7 of 7) intron (NM_005715, intron 7 of 7) -4437 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr12-2602 chr12 121786538 121786748 + 13.6 0.000 intron (NM_019034, intron 2 of 4) L2a|LINE|L2 7045 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr2-3515 chr2 230774570 230774780 + 13.6 0.000 intron (NM_001130850, intron 2 of 8) intron (NM_001130850, intron 2 of 8) 61127 NM_001130849 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr1-10061 chr1 92584561 92584771 + 13.6 0.000 intron (NM_001350198, intron 18 of 19) intron (NM_001350198, intron 18 of 19) -97741 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr3-1403 chr3 134250106 134250316 + 13.6 0.000 intron (NM_001005861, intron 1 of 14) CpG 533 NM_001005861 6259 Hs.654562 NM_002958 ENSG00000163785 RYK D3S3195|JTK5|JTK5A|RYK1 receptor like tyrosine kinase protein-coding chrX-576 chrX 68072010 68072220 + 13.6 0.000 intron (NM_002547, intron 20 of 24) L2a|LINE|L2 361380 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr14-1049 chr14 38553621 38553831 + 13.6 0.000 Intergenic LTR50|LTR|ERVL -297633 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr12-2284 chr12 111444792 111445002 + 13.6 0.000 intron (NM_001291424, intron 1 of 6) intron (NM_001291424, intron 1 of 6) 10035 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr19-1064 chr19 42313608 42313818 + 13.6 0.000 intron (NM_001366910, intron 1 of 14) CpG 404 NM_173633 284339 Hs.382075 NM_173633 ENSG00000167619 TMEM145 - transmembrane protein 145 protein-coding chr11-1082 chr11 119094781 119094991 + 13.6 0.000 3' UTR (NM_002105, exon 1 of 1) 3' UTR (NM_002105, exon 1 of 1) 581 NM_002105 3014 Hs.477879 NM_002105 ENSG00000188486 H2AFX H2A.X|H2A/X|H2AX H2A histone family member X protein-coding chr8-747 chr8 42587888 42588098 + 13.6 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -46039 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr14-697 chr14 51304866 51305076 + 13.6 0.000 intron (NR_145423, intron 1 of 1) L1MC5a|LINE|L1 23414 NR_145423 161342 NR_145423 ENSG00000258955 LINC00519 C14orf30|c14_5317 long intergenic non-protein coding RNA 519 ncRNA chr7-1395 chr7 2201664 2201874 + 13.6 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) 31176 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr12-1248 chr12 40238404 40238614 + 13.6 0.000 intron (NM_198578, intron 5 of 50) intron (NM_198578, intron 5 of 50) 13512 NM_198578 120892 Hs.187636 NM_198578 ENSG00000188906 LRRK2 AURA17|DARDARIN|PARK8|RIPK7|ROCO2 leucine rich repeat kinase 2 protein-coding chr14-847 chr14 103386164 103386374 + 13.6 0.000 intron (NM_001128920, intron 1 of 15) CpG 854 NM_001128918 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr2-4142 chr2 171199471 171199681 + 13.6 0.000 intron (NM_001136554, intron 1 of 20) intron (NM_001136554, intron 1 of 20) 31717 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr3-1945 chr3 197372109 197372319 + 13.6 0.000 Intergenic Intergenic -72893 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr9-3567 chr9 72203351 72203561 + 13.6 0.000 intron (NM_001351573, intron 3 of 14) intron (NM_001351573, intron 3 of 14) 54016 NR_147240 9615 Hs.494163 NM_004293 ENSG00000119125 GDA CYPIN|GAH|GUANASE|NEDASIN guanine deaminase protein-coding chr16-1320 chr16 888472 888682 + 13.6 0.000 intron (NR_147885, intron 5 of 11) intron (NR_147885, intron 5 of 11) -32456 NR_110946 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr2-3698 chr2 217413220 217413430 + 13.6 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 130592 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr1-2808 chr1 16625616 16625826 + 13.6 0.000 intron (NR_026752, intron 5 of 6) intron (NR_026752, intron 5 of 6) 5185 NR_026752 84809 Hs.631865 NR_026752 ENSG00000215908 CROCCP2 CROCCL1 CROCC pseudogene 2 pseudo chr4-1267 chr4 40254986 40255196 + 13.6 0.000 Intergenic Intergenic -52094 NR_121641 101060498 Hs.351492 NR_121640 ENSG00000249241 LINC02265 - long intergenic non-protein coding RNA 2265 ncRNA chr8-1405 chr8 48979057 48979267 + 13.6 0.000 Intergenic Intergenic -57733 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr11-2355 chr11 108496791 108497001 + 13.6 0.000 intron (NM_001363502, intron 1 of 5) L2c|LINE|L2 1488 NM_001363503 143888 Hs.83286 NM_153705 ENSG00000178202 POGLUT3 KDELC2 protein O-glucosyltransferase 3 protein-coding chr5-1711 chr5 135374684 135374894 + 13.6 0.000 intron (NM_138609, intron 2 of 8) intron (NM_138609, intron 2 of 8) 24449 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr16-3501 chr16 11593574 11593784 + 13.4 0.000 Intergenic L1MB5|LINE|L1 -6213 NR_024320 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr14-1242 chr14 104037654 104037864 + 13.4 0.000 intron (NM_153046, intron 32 of 35) intron (NM_153046, intron 32 of 35) -47941 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr2-1639 chr2 23594237 23594447 + 13.4 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 209163 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr15-1244 chr15 74708958 74709168 + 13.4 0.000 Intergenic Intergenic -13039 NM_001351378 80153 Hs.96852 NM_025083 ENSG00000179151 EDC3 LSM16|MRT50|YJDC|YJEFN2|hYjeF_N2-15q23 enhancer of mRNA decapping 3 protein-coding chr10-4947 chr10 27011362 27011572 + 13.4 0.000 intron (NM_014915, intron 32 of 33) intron (NM_014915, intron 32 of 33) -69466 NR_026795 387644 Hs.529965 NR_026795 ENSG00000283709 FAM238C C10orf51|LINC00202|LINC00202-1|NCRNA00202|bB27G4.1 family with sequence similarity 238 member C ncRNA chr7-2379 chr7 36651468 36651678 + 13.4 0.000 intron (NM_001177507, intron 3 of 19) intron (NM_001177507, intron 3 of 19) -51453 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr17-1475 chr17 78986059 78986269 + 13.4 0.000 Intergenic L1MD3|LINE|L1 -6241 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr22-888 chr22 50319327 50319537 + 13.4 0.000 intron (NM_001001794, intron 1 of 19) intron (NM_001001794, intron 1 of 19) 7580 NM_001001794 414918 Hs.530380 NM_001001794 ENSG00000205593 DENND6B AFI1B|FAM116B DENN domain containing 6B protein-coding chr6-2186 chr6 35531939 35532149 + 13.4 0.000 Intergenic AluSx1|SINE|Alu -19148 NM_003322 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr8-872 chr8 125655996 125656206 + 13.4 0.000 Intergenic Intergenic 223892 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr9-2627 chr9 20300980 20301190 + 13.4 0.000 Intergenic Intergenic 110153 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr12-1245 chr12 30692556 30692766 + 13.4 0.000 intron (NM_006390, intron 1 of 24) intron (NM_006390, intron 1 of 24) 3208 NM_006390 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr14-2950 chr14 49043725 49043935 + 13.4 0.000 Intergenic Intergenic 542550 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr9-1408 chr9 119852328 119852538 + 13.4 0.000 Intergenic Intergenic -82627 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr9-1661 chr9 31608607 31608817 + 13.4 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -227222 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr4-5178 chr4 158255811 158256021 + 13.4 0.000 TTS (NM_018342) TTS (NM_018342) 45430 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr1-6844 chr1 101190456 101190666 + 13.4 0.000 Intergenic Intergenic 45967 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr5-1445 chr5 34898317 34898527 + 13.4 0.000 intron (NM_001317949, intron 10 of 10) intron (NM_001317949, intron 10 of 10) 17082 NM_002853 5810 Hs.38114 NM_002853 ENSG00000113456 RAD1 HRAD1|REC1 RAD1 checkpoint DNA exonuclease protein-coding chr14-1536 chr14 61184188 61184398 + 13.4 0.000 Intergenic Intergenic 97045 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr18-873 chr18 40402167 40402377 + 13.4 0.000 Intergenic Intergenic 335986 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr2-8468 chr2 123885421 123885631 + 13.4 0.000 Intergenic L1MA2|LINE|L1 139648 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA chr11-5854 chr11 9411086 9411296 + 13.4 0.000 intron (NM_006391, intron 4 of 24) intron (NM_006391, intron 4 of 24) -17575 NR_002962 677808 Hs.689720 NR_002962 ENSG00000201998 SNORA23 ACA23 small nucleolar RNA, H/ACA box 23 snoRNA chr6-2016 chr6 38212681 38212891 + 13.4 0.000 intron (NM_052893, intron 10 of 11) intron (NM_052893, intron 10 of 11) -268810 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr1-7840 chr1 72994958 72995168 + 13.4 0.000 Intergenic L1MEg|LINE|L1 -311107 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chr6-773 chr6 39813176 39813386 + 13.4 0.000 intron (NM_015345, intron 1 of 24) intron (NM_015345, intron 1 of 24) 20284 NM_015345 23500 Hs.357128 NM_015345 ENSG00000146122 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding chr4-1197 chr4 70616852 70617062 + 13.4 0.000 Intergenic L2a|LINE|L2 -11787 NM_031889 10117 Hs.667018 NM_031889 ENSG00000132464 ENAM ADAI|AI1C|AIH2 enamelin protein-coding chrX-553 chrX 16605027 16605237 + 13.4 0.000 intron (NM_019857, intron 17 of 18) MER68B|LTR|ERVL 21953 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr2-4168 chr2 182020398 182020608 + 13.4 0.000 intron (NM_001261425, intron 2 of 5) intron (NM_001261425, intron 2 of 5) 34650 NM_001261425 151242 Hs.10941 NM_001080545 ENSG00000150722 PPP1R1C IPP5 protein phosphatase 1 regulatory inhibitor subunit 1C protein-coding chr12-2111 chr12 55842948 55843158 + 13.4 0.000 promoter-TSS (NR_073606) promoter-TSS (NR_073606) -117 NM_002429 4327 Hs.591033 NM_002429 ENSG00000123342 MMP19 CODA|MMP18|RASI-1 matrix metallopeptidase 19 protein-coding chr15-1455 chr15 89623707 89623917 + 13.4 0.000 exon (NM_152259, exon 20 of 22) exon (NM_152259, exon 20 of 22) 31655 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chr3-1967 chr3 110577056 110577266 + 13.4 0.000 Intergenic LTR16E2|LTR|ERVL 492798 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr7-2768 chr7 65794815 65795025 + 13.4 0.000 Intergenic L2a|LINE|L2 -24110 NR_038378 441242 Hs.373941 NM_001013464 ENSG00000272693 LOC441242 - uncharacterized LOC441242 ncRNA chr9-2912 chr9 134278316 134278526 + 13.4 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 16976 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr2-8831 chr2 171799653 171799863 + 13.4 0.000 intron (NR_047549, intron 12 of 16) intron (NR_047549, intron 12 of 16) 94486 NM_003705 8604 Hs.470608 NM_003705 ENSG00000115840 SLC25A12 AGC1|ARALAR|EIEE39 solute carrier family 25 member 12 protein-coding chr1-3202 chr1 155651847 155652057 + 13.4 0.000 Intergenic HERV4_I-int|LTR|ERV1 27303 NR_132762 106633810 NR_132762 SCARNA26A - small Cajal body-specific RNA 26A ncRNA chr1-4045 chr1 202811623 202811833 + 13.4 0.000 non-coding (NR_046326, exon 2 of 2) non-coding (NR_046326, exon 2 of 2) 782 NR_046326 100506696 Hs.23459 NR_046325 ENSG00000228288 PCAT6 KDM5B-AS1|KDM5BAS1|PCAN-R1|ncRNA-a2|onco-lncRNA-96 prostate cancer associated transcript 6 ncRNA chr2-3951 chr2 64848691 64848901 + 13.4 0.000 intron (NR_110224, intron 2 of 4) MLT1H|LTR|ERVL-MaLR 14835 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr17-3220 chr17 6879918 6880128 + 13.4 0.000 intron (NR_002710, intron 2 of 13) HERVK9-int|LTR|ERVK -13754 NR_120453 245 Hs.378695 NR_002710 ENSG00000262943 ALOX12P2 ALOX12E arachidonate 12-lipoxygenase pseudogene 2 pseudo chr9-2139 chr9 113379627 113379837 + 13.4 0.000 Intergenic LTR5B|LTR|ERVK -2746 NM_001304510 81932 Hs.7739 NM_031219 ENSG00000119431 HDHD3 2810435D12Rik|C9orf158 haloacid dehalogenase like hydrolase domain containing 3 protein-coding chr18-908 chr18 58402306 58402516 + 13.4 0.000 TTS (NM_001144966) TTS (NM_001144966) -48663 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr4-1129 chr4 156946734 156946944 + 13.4 0.000 intron (NR_036641, intron 1 of 6) intron (NR_036641, intron 1 of 6) 24960 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr7-3853 chr7 101715226 101715436 + 13.4 0.000 Intergenic MIR|SINE|MIR -86035 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr8-2230 chr8 25914417 25914627 + 13.4 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 130891 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr22-1106 chr22 37545277 37545487 + 13.4 0.000 Intergenic Intergenic -15098 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr5-1764 chr5 13234943 13235153 + 13.4 0.000 Intergenic LTR41C|LTR|ERVL -202162 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr15-3489 chr15 96951801 96952011 + 13.4 0.000 Intergenic L2b|LINE|L2 168471 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr15-1616 chr15 85316592 85316802 + 13.4 0.000 Intergenic Intergenic -63899 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr4-1833 chr4 107997495 107997705 + 13.4 0.000 intron (NM_005327, intron 1 of 7) intron (NM_005327, intron 1 of 7) -7064 NM_001331027 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding chr2-6131 chr2 224393678 224393888 + 13.4 0.000 intron (NM_001122779, intron 1 of 1) LTR104_Mam|LTR|Gypsy 8211 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr9-2518 chr9 114488785 114488995 + 13.4 0.000 intron (NM_015404, intron 1 of 11) L2|LINE|L2 14325 NM_001083885 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chrX-194 chrX 154136618 154136828 + 13.4 0.000 Intergenic Intergenic -7520 NM_020061 5956 Hs.247787 NM_020061 ENSG00000102076 OPN1LW CBBM|CBP|COD5|RCP|ROP opsin 1, long wave sensitive protein-coding chr1-6249 chr1 228327527 228327737 + 13.4 0.000 intron (NM_052843, intron 56 of 80) L1MB7|LINE|L1 69477 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr12-2152 chr12 110956684 110956894 + 13.4 0.000 intron (NR_135001, intron 2 of 3) intron (NR_135001, intron 2 of 3) 1029 NR_135002 105369980 Hs.564357 NR_135001 ENSG00000258240 LOC105369980 - uncharacterized LOC105369980 ncRNA chr8-766 chr8 16361955 16362165 + 13.4 0.000 Intergenic Intergenic -169269 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr1-1494 chr1 225447756 225447966 + 13.4 0.000 Intergenic Intergenic -19006 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr21-168 chr21 43975606 43975816 + 13.4 0.000 intron (NM_001369881, intron 7 of 9) intron (NM_001369881, intron 7 of 9) -36598 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr21-535 chr21 41326482 41326692 + 13.4 0.000 intron (NM_058186, intron 2 of 7) intron (NM_058186, intron 2 of 7) 9786 NM_058186 54097 Hs.473877 NM_058186 ENSG00000183844 FAM3B 2-21|C21orf11|C21orf76|ORF9|PANDER|PRED44 family with sequence similarity 3 member B protein-coding chr1-1783 chr1 37595800 37596010 + 13.4 0.000 promoter-TSS (NM_001323623) promoter-TSS (NM_001323623) 32 NM_013285 29889 Hs.75528 NM_013285 ENSG00000134697 GNL2 HUMAUANTIG|NGP1|Ngp-1|Nog2|Nug2 G protein nucleolar 2 protein-coding chr16-4928 chr16 89739666 89739876 + 13.4 0.000 non-coding (NR_110122, exon 11 of 11) non-coding (NR_110122, exon 11 of 11) 18234 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr3-1953 chr3 29373666 29373876 + 13.4 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 92459 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr10-2023 chr10 70267502 70267712 + 13.4 0.000 intron (NM_022146, intron 1 of 3) intron (NM_022146, intron 1 of 3) 16397 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr9-1458 chr9 3498768 3498978 + 13.4 0.000 intron (NM_134428, intron 1 of 17) intron (NM_134428, intron 1 of 17) -9386 NM_001282117 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr14-617 chr14 104118356 104118566 + 13.4 0.000 promoter-TSS (NR_039859) promoter-TSS (NR_039859) -958 NR_039859 100616173 NR_039859 ENSG00000283165 MIR203B MIR3545|hsa-mir-203b microRNA 203b ncRNA chr14-1056 chr14 61561198 61561408 + 13.4 0.000 non-coding (NR_110416, exon 4 of 5) non-coding (NR_110416, exon 4 of 5) 8891 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr9-1719 chr9 111288567 111288777 + 13.4 0.000 Intergenic Intergenic -17458 NR_106989 102465800 NR_106989 ENSG00000274263 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA chr22-983 chr22 35961652 35961862 + 13.4 0.000 promoter-TSS (NM_001349989) promoter-TSS (NM_001349989) -127 NM_001349992 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr3-4260 chr3 148042555 148042765 + 13.4 0.000 Intergenic Intergenic -35499 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr9-2432 chr9 137044990 137045200 + 13.4 0.000 intron (NM_015392, intron 1 of 8) intron (NM_015392, intron 1 of 8) 1082 NM_015392 56654 Hs.719906 NM_015392 ENSG00000107281 NPDC1 CAB|CAB-|CAB-1|CAB1|NPDC-1 neural proliferation, differentiation and control 1 protein-coding chr12-1600 chr12 46442499 46442709 + 13.4 0.000 intron (NR_125381, intron 2 of 2) intron (NR_125381, intron 2 of 2) 58497 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr15-1497 chr15 45456510 45456720 + 13.4 0.000 Intergenic Intergenic 23565 NR_030599 100126311 NR_030599 ENSG00000284386 MIR147B MIRN147B|mir-147b microRNA 147b ncRNA chr9-1125 chr9 105385338 105385548 + 13.4 0.000 exon (NM_001286730, exon 15 of 16) exon (NM_001286730, exon 15 of 16) -62591 NM_001287191 83856 Hs.136901 NM_031919 ENSG00000106701 FSD1L CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1 fibronectin type III and SPRY domain containing 1 like protein-coding chr12-1802 chr12 132437987 132438197 + 13.4 0.000 Intergenic Intergenic -52059 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr5-2526 chr5 163880304 163880514 + 13.4 0.000 Intergenic Intergenic 374790 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr9-2966 chr9 137540565 137540775 + 13.4 0.000 exon (NM_152286, exon 7 of 34) exon (NM_152286, exon 7 of 34) 9732 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr5-1691 chr5 81800855 81801065 + 13.4 0.000 Intergenic Intergenic -49707 NM_001256732 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr10-2259 chr10 114638941 114639151 + 13.4 0.000 intron (NM_001322886, intron 1 of 20) intron (NM_001322886, intron 1 of 20) -6649 NM_001352440 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr1-4553 chr1 66525929 66526139 + 13.4 0.000 Intergenic Intergenic -7559 NM_001308203 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr19-1230 chr19 18940169 18940379 + 13.4 0.000 promoter-TSS (NM_001145722) promoter-TSS (NM_001145722) 20 NR_134912 102724360 Hs.559299 NR_134912 ENSG00000269019 HOMER3-AS1 - HOMER3 antisense RNA 1 ncRNA chr10-1319 chr10 78756929 78757139 + 13.4 0.000 Intergenic Intergenic 310414 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr7-1198 chr7 51123704 51123914 + 13.4 0.000 intron (NM_015198, intron 6 of 12) intron (NM_015198, intron 6 of 12) 193000 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr7-1679 chr7 127771064 127771274 + 13.4 0.000 intron (NM_014390, intron 10 of 23) intron (NM_014390, intron 10 of 23) 118975 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr1-2865 chr1 182589045 182589255 + 13.4 0.000 intron (NM_021133, intron 1 of 6) intron (NM_021133, intron 1 of 6) 106 NM_021133 6041 Hs.518545 NM_021133 ENSG00000135828 RNASEL PRCA1|RNS4 ribonuclease L protein-coding chr13-1119 chr13 23743373 23743583 + 13.4 0.000 intron (NM_005932, intron 18 of 18) intron (NM_005932, intron 18 of 18) -145390 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr19-2755 chr19 41204412 41204622 + 13.4 0.000 intron (NM_030622, intron 7 of 8) intron (NM_030622, intron 7 of 8) 11298 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr13-1476 chr13 99307200 99307410 + 13.4 0.000 promoter-TSS (NM_004951) promoter-TSS (NM_004951) 94 NM_004951 1880 Hs.784 NM_004951 ENSG00000169508 GPR183 EBI2|hEBI2 G protein-coupled receptor 183 protein-coding chr10-3831 chr10 133493981 133494191 + 13.4 0.000 Intergenic THE1A|LTR|ERVL-MaLR -33277 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr14-1776 chr14 101475901 101476111 + 13.4 0.000 Intergenic Intergenic 33930 NR_135240 100507277 Hs.123543 NR_135240 ENSG00000259082 LINC02314 - long intergenic non-protein coding RNA 2314 ncRNA chr10-2194 chr10 28411939 28412149 + 13.4 0.000 Intergenic Intergenic 83769 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chr6-1884 chr6 125130543 125130753 + 13.4 0.000 Intergenic AluJr|SINE|Alu -23125 NM_003287 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr17-1362 chr17 67376502 67376712 + 13.4 0.000 promoter-TSS (NM_012417) promoter-TSS (NM_012417) -674 NM_012417 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein cytoplasmic 1 protein-coding chr9-1557 chr9 4491129 4491339 + 13.4 0.000 intron (NM_004170, intron 1 of 11) CpG 766 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr17-2972 chr17 65470740 65470950 + 13.4 0.000 Intergenic Intergenic 13304 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr17-2345 chr17 63819544 63819754 + 13.4 0.000 TTS (NM_007372) TTS (NM_007372) -7782 NM_002805 5705 Hs.79387 NM_002805 ENSG00000087191 PSMC5 S8|SUG-1|SUG1|TBP10|TRIP1|p45|p45/SUG proteasome 26S subunit, ATPase 5 protein-coding chr18-1261 chr18 57200936 57201146 + 13.4 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -29847 NR_149129 105372138 Hs.574448 NR_149129 ENSG00000267726 LINC02565 - long intergenic non-protein coding RNA 2565 ncRNA chr18-2154 chr18 57705988 57706198 + 13.4 0.000 intron (NM_005603, intron 3 of 27) intron (NM_005603, intron 3 of 27) 75762 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr7-1276 chr7 134790457 134790667 + 13.4 0.000 intron (NM_033157, intron 1 of 14) intron (NM_033157, intron 1 of 14) 10928 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr12-2529 chr12 97636766 97636976 + 13.4 0.000 Intergenic Intergenic 73059 NR_029678 406926 NR_029678 ENSG00000207586 MIR135A2 MIRN135-2|MIRN135A2|mir-135a-2 microRNA 135a-2 ncRNA chr3-1281 chr3 39106961 39107171 + 13.4 0.000 promoter-TSS (NM_001105513) promoter-TSS (NM_001105513) 561 NR_103866 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding chr3-4346 chr3 183098557 183098767 + 13.4 0.000 non-coding (NR_120640, exon 1 of 19) non-coding (NR_120640, exon 1 of 19) 581 NR_120640 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding chr16-1000 chr16 47037728 47037938 + 13.4 0.000 Intergenic CpG -64159 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr1-4430 chr1 227316066 227316276 + 13.4 0.000 intron (NM_001366019, intron 1 of 36) intron (NM_001366019, intron 1 of 36) 2321 NM_001366010 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr10-527 chr10 15167824 15168034 + 13.4 0.000 intron (NM_001308295, intron 1 of 12) CpG 764 NM_004808 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr10-971 chr10 97713444 97713654 + 13.4 0.000 promoter-TSS (NM_031484) promoter-TSS (NM_031484) -181 NM_031484 83742 Hs.744073 NM_031484 ENSG00000155254 MARVELD1 GB14|MARVD1|MRVLDC1|bA548K23.8 MARVEL domain containing 1 protein-coding chr14-1760 chr14 77262830 77263040 + 13.4 0.000 Intergenic L2|LINE|L2 -3283 NR_031661 100302236 NR_031661 ENSG00000221754 MIR1260A MIR1260|MIRN1260|hsa-mir-1260|hsa-mir-1260a|mir-1260a microRNA 1260a ncRNA chr6-1127 chr6 144936862 144937072 + 13.4 0.000 Intergenic Intergenic 531312 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr4-3968 chr4 185851885 185852095 + 13.4 0.000 intron (NM_021069, intron 1 of 20) intron (NM_021069, intron 1 of 20) -39734 NM_003603 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr8-1304 chr8 97951971 97952181 + 13.4 0.000 intron (NM_002380, intron 4 of 18) intron (NM_002380, intron 4 of 18) 83012 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr1-4907 chr1 39387470 39387680 + 13.4 0.000 exon (NM_012090, exon 52 of 93) exon (NM_012090, exon 52 of 93) -21498 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr16-1599 chr16 48683502 48683712 + 13.4 0.000 Intergenic Intergenic -73427 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr1-3691 chr1 173269591 173269801 + 13.4 0.000 intron (NR_037845, intron 2 of 2) Tigger7|DNA|TcMar-Tigger -62365 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr2-1989 chr2 39436318 39436528 + 13.4 0.000 promoter-TSS (NR_037875) promoter-TSS (NR_037875) 862 NM_001270425 8491 Hs.655750 NM_003618 ENSG00000011566 MAP4K3 GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding chr12-2167 chr12 127728387 127728597 + 13.4 0.000 Intergenic Intergenic -72904 NR_134995 105370068 Hs.524845 NR_134995 LOC105370068 - uncharacterized LOC105370068 ncRNA chr1-5034 chr1 85398890 85399100 + 13.4 0.000 intron (NM_001134445, intron 2 of 6) MER65-int|LTR|ERV1 5511 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr1-4523 chr1 39212392 39212602 + 13.4 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 128330 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr17-2848 chr17 27341132 27341342 + 13.4 0.000 Intergenic Intergenic 47123 NM_015626 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding chr1-1476 chr1 114511414 114511624 + 13.4 0.000 promoter-TSS (NM_033020) promoter-TSS (NM_033020) -316 NM_015906 51592 Hs.26837 NM_015906 ENSG00000197323 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding chr10-1181 chr10 75428501 75428711 + 13.4 0.000 Intergenic Intergenic -3018 NM_001305581 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr11-6087 chr11 34020005 34020215 + 13.4 0.000 Intergenic L1MC4a|LINE|L1 -31621 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr10-2418 chr10 307969 308179 + 13.4 0.000 intron (NM_014974, intron 32 of 36) intron (NM_014974, intron 32 of 36) 128080 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr1-3527 chr1 202185638 202185848 + 13.4 0.000 intron (NR_002930, intron 15 of 21) intron (NR_002930, intron 15 of 21) -8247 NM_001017403 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr2-5457 chr2 126997440 126997650 + 13.4 0.000 Intergenic L1PA8|LINE|L1 84520 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr10-1642 chr10 94524207 94524417 + 13.4 0.000 intron (NM_015188, intron 11 of 12) MLT1J2|LTR|ERVL-MaLR -21455 NM_001289070 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding chr19-4794 chr19 34507855 34508065 + 13.4 0.000 3' UTR (NM_001080436, exon 8 of 8) 3' UTR (NM_001080436, exon 8 of 8) 26202 NM_001080436 126374 Hs.585010 NM_001080436 ENSG00000142279 WTIP - WT1 interacting protein protein-coding chr9-1468 chr9 84754599 84754809 + 13.4 0.000 intron (NM_001018064, intron 12 of 17) intron (NM_001018064, intron 12 of 17) 48803 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr19-2555 chr19 49327964 49328174 + 13.4 0.000 Intergenic L2a|LINE|L2 -2878 NM_014037 28968 Hs.130949 NM_014037 ENSG00000063127 SLC6A16 NT5|NTT5 solute carrier family 6 member 16 protein-coding chr11-1938 chr11 78051527 78051737 + 13.4 0.000 intron (NM_001203262, intron 1 of 2) MIR3|SINE|MIR -5441 NM_001282406 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr10-3223 chr10 102800290 102800500 + 13.4 0.000 intron (NM_001083913, intron 2 of 3) intron (NM_001083913, intron 2 of 3) 24174 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr6-3266 chr6 151253736 151253946 + 13.4 0.000 intron (NM_005100, intron 2 of 4) AluSx|SINE|Alu 13874 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr4-929 chr4 15963228 15963438 + 13.4 0.000 promoter-TSS (NM_031950) promoter-TSS (NM_031950) -158 NM_031950 83888 Hs.98785 NM_031950 ENSG00000137441 FGFBP2 HBP17RP|KSP37 fibroblast growth factor binding protein 2 protein-coding chr4-1543 chr4 168844753 168844963 + 13.4 0.000 intron (NM_001367567, intron 1 of 11) intron (NM_001367567, intron 1 of 11) 12763 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr18-699 chr18 49789167 49789377 + 13.4 0.000 intron (NM_006111, intron 7 of 9) intron (NM_006111, intron 7 of 9) 24261 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr3-2659 chr3 32914027 32914237 + 13.4 0.000 Intergenic Intergenic -37512 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr21-484 chr21 46039017 46039227 + 13.4 0.000 Intergenic Intergenic 57373 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr6-1775 chr6 83855188 83855398 + 13.4 0.000 intron (NR_103525, intron 2 of 2) intron (NR_103525, intron 2 of 2) 1688 NR_103525 134701 Hs.149454 NM_001009994 ENSG00000203877 RIPPLY2 C6orf159|SCDO6|dJ237I15.1 ripply transcriptional repressor 2 protein-coding chr22-529 chr22 30635141 30635351 + 13.4 0.000 promoter-TSS (NM_001318370) promoter-TSS (NM_001318370) -535 NM_001318371 339665 Hs.660384 NM_001001479 ENSG00000100036 SLC35E4 - solute carrier family 35 member E4 protein-coding chr14-2272 chr14 30569704 30569914 + 13.4 0.000 intron (NR_151720, intron 2 of 3) intron (NR_151720, intron 2 of 3) 7548 NR_151720 105370431 Hs.603980 NR_151720 ENSG00000257636 G2E3-AS1 CAT1647 G2E3 antisense RNA 1 ncRNA chr8-1526 chr8 89764312 89764522 + 13.4 0.000 intron (NM_003821, intron 2 of 10) intron (NM_003821, intron 2 of 10) 6601 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding chr2-4198 chr2 200308840 200309050 + 13.4 0.000 promoter-TSS (NM_001282744) promoter-TSS (NM_001282744) -5 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr10-3426 chr10 35946503 35946713 + 13.4 0.000 Intergenic Intergenic 168306 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr14-1465 chr14 105023817 105024027 + 13.4 0.000 Intergenic L1ME3B|LINE|L1 -2839 NM_145701 55038 Hs.34045 NM_017955 ENSG00000170779 CDCA4 HEPP|SEI-3/HEPP cell division cycle associated 4 protein-coding chr2-4887 chr2 122402947 122403157 + 13.4 0.000 Intergenic Intergenic 647401 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr11-4187 chr11 60993355 60993565 + 13.4 0.000 intron (NM_001254751, intron 1 of 10) L3b|LINE|CR1 21780 NM_001254751 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr1-3972 chr1 154006235 154006445 + 13.4 0.000 intron (NM_207308, intron 35 of 39) intron (NM_207308, intron 35 of 39) 15578 NM_001030 6232 Hs.546291 NM_001030 ENSG00000177954 RPS27 DBA17|MPS-1|MPS1|S27 ribosomal protein S27 protein-coding chr1-2389 chr1 160205808 160206018 + 13.4 0.000 non-coding (NR_123725, exon 3 of 5) non-coding (NR_123725, exon 3 of 5) 529 NR_123724 8682 Hs.517216 NM_003768 ENSG00000162734 PEA15 HMAT1|HUMMAT1H|MAT1|MAT1H|PEA-15|PED|PED-PEA15|PED/PEA15 proliferation and apoptosis adaptor protein 15 protein-coding chr4-4475 chr4 56129818 56130028 + 13.4 0.000 Intergenic L2c|LINE|L2 -40272 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr3-2510 chr3 5138779 5138989 + 13.4 0.000 intron (NM_018184, intron 1 of 6) intron (NM_018184, intron 1 of 6) 16592 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr1-2820 chr1 32539956 32540166 + 13.4 0.000 intron (NM_001040441, intron 1 of 4) CpG 634 NR_111980 653121 Hs.546479 NM_144621 ENSG00000160062 ZBTB8A BOZF1|ZBTB8|ZNF916A zinc finger and BTB domain containing 8A protein-coding chrX-387 chrX 71255241 71255451 + 13.4 0.000 promoter-TSS (NM_001171163) promoter-TSS (NM_001171163) -149 NM_001171162 9203 Hs.522684 NM_005096 ENSG00000147130 ZMYM3 DXS6673E|MYM|XFIM|ZNF198L2|ZNF261 zinc finger MYM-type containing 3 protein-coding chr16-2595 chr16 88557288 88557498 + 13.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 4590 NR_146877 400555 Hs.120392 NM_001001682 ZC3H18-AS1 C16orf85|LINC00859 ZC3H18 antisense RNA 1 (head to head) ncRNA chr19-1694 chr19 16521363 16521573 + 13.4 0.000 TTS (NM_032207) TTS (NM_032207) 20969 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr10-4431 chr10 69096223 69096433 + 13.4 0.000 intron (NM_001321054, intron 1 of 1) MIR|SINE|MIR 8225 NM_002727 5552 Hs.1908 NM_002727 ENSG00000122862 SRGN PPG|PRG|PRG1 serglycin protein-coding chr1-4827 chr1 24266423 24266633 + 13.4 0.000 Intergenic Intergenic -52829 NM_198174 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr3-1024 chr3 133452761 133452971 + 13.4 0.000 intron (NM_003571, intron 4 of 6) intron (NM_003571, intron 4 of 6) 2910 NR_135278 85003 Hs.659202 NR_135276 ENSG00000249993 BFSP2-AS1 - BFSP2 antisense RNA 1 ncRNA chr14-896 chr14 52266458 52266668 + 13.4 0.000 Intergenic Intergenic -1135 NM_000953 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr5-818 chr5 150488710 150488920 + 13.4 0.000 Intergenic Intergenic -2823 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chr11-1153 chr11 3217230 3217440 + 13.4 0.000 promoter-TSS (NR_027138) promoter-TSS (NR_027138) -997 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr16-804 chr16 8963814 8964024 + 13.4 0.000 promoter-TSS (NM_003470) promoter-TSS (NM_003470) -13 NM_003470 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chr1-5733 chr1 89668572 89668782 + 13.4 0.000 intron (NM_032270, intron 1 of 2) MIRb|SINE|MIR 35557 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr9-1477 chr9 114177523 114177733 + 13.4 0.000 intron (NM_032888, intron 3 of 60) MIRb|SINE|MIR 22091 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr7-2726 chr7 38506850 38507060 + 13.4 0.000 intron (NM_001635, intron 2 of 20) intron (NM_001635, intron 2 of 20) 124418 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr4-835 chr4 8435792 8436002 + 13.4 0.000 intron (NM_003501, intron 1 of 17) HERV3-int|LTR|ERV1 4826 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr2-2570 chr2 226475721 226475931 + 13.4 0.000 Intergenic Intergenic 182967 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr1-2254 chr1 197908893 197909103 + 13.4 0.000 Intergenic Intergenic -3507 NM_001014434 56956 Hs.442578 NM_020204 ENSG00000143355 LHX9 - LIM homeobox 9 protein-coding chr9-1131 chr9 121546125 121546335 + 13.4 0.000 Intergenic Intergenic -20872 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr10-951 chr10 33099759 33099969 + 13.4 0.000 intron (NR_160030, intron 1 of 2) intron (NR_160030, intron 1 of 2) 16943 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr18-397 chr18 8425452 8425662 + 13.4 0.000 Intergenic Intergenic -58523 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr17-2957 chr17 61443168 61443378 + 13.4 0.000 Intergenic UCON22|Unknown|Unknown -9149 NM_001321120 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr14-1351 chr14 99982667 99982877 + 13.4 0.000 intron (NM_001330221, intron 1 of 13) intron (NM_001330221, intron 1 of 13) 11350 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chrX-2030 chrX 16612809 16613019 + 13.4 0.000 intron (NM_019857, intron 16 of 18) MIRb|SINE|MIR 14171 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr22-646 chr22 31946293 31946503 + 13.4 0.000 intron (NM_003405, intron 1 of 1) intron (NM_003405, intron 1 of 1) -1036 NM_015372 25775 Hs.627602 NM_015372 ENSG00000128254 C22orf24 HSN44A4A chromosome 22 open reading frame 24 protein-coding chr6-1936 chr6 88377179 88377389 + 13.4 0.000 Intergenic Intergenic 162085 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr12-1505 chr12 50574639 50574849 + 13.4 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 69759 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr9-2520 chr9 115105031 115105241 + 13.4 0.000 intron (NM_002160, intron 1 of 27) intron (NM_002160, intron 1 of 27) 13021 NM_002160 3371 Hs.143250 NM_002160 ENSG00000041982 TNC 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C tenascin C protein-coding chr1-4459 chr1 4471064 4471274 + 13.4 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 59118 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr10-5560 chr10 88553432 88553642 + 13.4 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 29781 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr9-5570 chr9 111994839 111995049 + 13.4 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 62844 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr6-1189 chr6 151721223 151721433 + 13.4 0.000 intron (NM_001122742, intron 2 of 9) intron (NM_001122742, intron 2 of 9) 30832 NM_001122742 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr9-2671 chr9 38063016 38063226 + 13.4 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 6106 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr11-4472 chr11 106384639 106384849 + 13.4 0.000 Intergenic L2|LINE|L2 133337 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr13-1446 chr13 68128494 68128704 + 13.4 0.000 Intergenic LTR28B|LTR|ERV1 756212 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr11-1773 chr11 47442343 47442553 + 13.4 0.000 intron (NM_005055, intron 3 of 7) AluJo|SINE|Alu 6688 NM_032645 5913 Hs.81218 NM_005055 ENSG00000165917 RAPSN CMS11|CMS4C|FADS|FADS2|RAPSYN|RNF205 receptor associated protein of the synapse protein-coding chr5-809 chr5 119355705 119355915 + 13.4 0.000 promoter-TSS (NM_014350) promoter-TSS (NM_014350) -209 NM_014350 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr7-693 chr7 30433150 30433360 + 13.4 0.000 intron (NM_006092, intron 11 of 13) intron (NM_006092, intron 11 of 13) 42370 NR_108081 100506516 NR_108081 ENSG00000281404 LINC01176 - long intergenic non-protein coding RNA 1176 ncRNA chr10-1575 chr10 4947757 4947967 + 13.4 0.000 Intergenic MER67A|LTR|ERV1 -15553 NM_001353 1645 Hs.460260 NM_001353 ENSG00000187134 AKR1C1 2-ALPHA-HSD|20-ALPHA-HSD|C9|DD1|DD1/DD2|DDH|DDH1|H-37|HAKRC|HBAB|MBAB aldo-keto reductase family 1 member C1 protein-coding chr5-2907 chr5 126412184 126412394 + 13.4 0.000 intron (NM_001146319, intron 1 of 13) L1P4|LINE|L1 -10857 NM_001146320 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr8-1757 chr8 30604943 30605153 + 13.4 0.000 intron (NM_001348353, intron 6 of 6) intron (NM_001348353, intron 6 of 6) -33532 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr15-1287 chr15 101407030 101407240 + 13.4 0.000 intron (NM_138325, intron 6 of 13) intron (NM_138325, intron 6 of 13) 72698 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr5-1444 chr5 33564255 33564465 + 13.4 0.000 intron (NM_001324512, intron 17 of 21) L2c|LINE|L2 123584 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr1-4003 chr1 167600226 167600436 + 13.4 0.000 Intergenic Intergenic -29862 NM_001322923 92241 Hs.493867 NM_052862 ENSG00000198771 RCSD1 CAPZIP|MK2S4 RCSD domain containing 1 protein-coding chr4-4355 chr4 38703594 38703804 + 13.4 0.000 Intergenic Intergenic -39071 NR_026804 79667 Hs.29725 NM_024614 ENSG00000231160 KLF3-AS1 - KLF3 antisense RNA 1 ncRNA chr9-872 chr9 84668450 84668660 + 13.4 0.000 promoter-TSS (NM_001291937) promoter-TSS (NM_001291937) 33 NM_001369545 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr16-1402 chr16 36529 36739 + 13.4 0.000 Intergenic MIRc|SINE|MIR 13718 NR_130735 100132169 Hs.498519 NR_130735 ENSG00000231439 WASIR2 NCRNA00286A WASH and IL9R antisense RNA 2 ncRNA chr2-1824 chr2 119679247 119679457 + 13.4 0.000 5' UTR (NM_001105198, exon 1 of 2) 5' UTR (NM_001105198, exon 1 of 2) 151 NR_148341 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr2-1939 chr2 218261882 218262092 + 13.4 0.000 intron (NM_170699, intron 1 of 1) intron (NM_170699, intron 1 of 1) 972 NM_170699 151306 Hs.160954 NM_170699 ENSG00000179921 GPBAR1 BG37|GPCR19|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding chr19-1789 chr19 49856076 49856286 + 13.4 0.000 TTS (NR_110730) TTS (NR_110730) 1590 NR_039904 100616313 NR_039904 ENSG00000265954 MIR4749 mir-4749 microRNA 4749 ncRNA chr5-5617 chr5 153739324 153739534 + 13.4 0.000 intron (NM_000827, intron 11 of 15) L2a|LINE|L2 159558 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr12-2565 chr12 110666389 110666599 + 13.4 0.000 intron (NM_001256413, intron 2 of 6) L1MEc|LINE|L1 22621 NM_032369 84329 Hs.211511 NM_032369 ENSG00000122986 HVCN1 HV1|VSOP hydrogen voltage gated channel 1 protein-coding chr7-1118 chr7 134515848 134516058 + 13.4 0.000 Intergenic Intergenic -11614 NM_020299 57016 Hs.116724 NM_020299 ENSG00000198074 AKR1B10 AKR1B11|AKR1B12|ALDRLn|ARL-1|ARL1|HIS|HSI aldo-keto reductase family 1 member B10 protein-coding chr3-2591 chr3 134462613 134462823 + 13.4 0.000 Intergenic Intergenic -23006 NM_001042383 80254 Hs.443301 NM_025180 ENSG00000182923 CEP63 SCKL6 centrosomal protein 63 protein-coding chr5-2291 chr5 50595295 50595505 + 13.4 0.000 Intergenic LTR37-int|LTR|ERV1 -70531 NM_001178055 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr4-3289 chr4 142553017 142553227 + 13.4 0.000 intron (NM_003866, intron 2 of 26) L2b|LINE|L2 293413 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr20-915 chr20 63266285 63266495 + 13.4 0.000 Intergenic Intergenic -6395 NM_001281483 55738 Hs.25584 NM_018209 ENSG00000101199 ARFGAP1 ARF1GAP|HRIHFB2281 ADP ribosylation factor GTPase activating protein 1 protein-coding chr5-1793 chr5 54906072 54906282 + 13.4 0.000 Intergenic Intergenic 79416 NM_001135604 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr4-3983 chr4 872226 872436 + 13.4 0.000 intron (NM_005255, intron 18 of 27) CpG -46202 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr12-2987 chr12 118290103 118290313 + 13.4 0.000 intron (NM_001346490, intron 1 of 21) L2c|LINE|L2 69497 NM_001346489 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr7-416 chr7 158595148 158595358 + 13.4 0.000 Intergenic (GGTGGT)n|Simple_repeat|Simple_repeat 3637 NR_049893 100847032 NR_049893 ENSG00000265598 MIR5707 - microRNA 5707 ncRNA chr10-2076 chr10 102989005 102989215 + 13.4 0.000 intron (NM_199076, intron 1 of 6) intron (NM_199076, intron 1 of 6) -70775 NR_160733 107984265 NR_160733 LOC107984265 - uncharacterized LOC107984265 ncRNA chr3-1506 chr3 133257063 133257273 + 13.4 0.000 promoter-TSS (NR_110812) promoter-TSS (NR_110812) -47 NR_110812 101927455 Hs.570550 NR_110812 ENSG00000251011 TMEM108-AS1 - TMEM108 antisense RNA 1 ncRNA chr7-2517 chr7 44622795 44623005 + 13.4 0.000 intron (NM_002541, intron 1 of 22) intron (NM_002541, intron 1 of 22) 16273 NM_001003941 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr11-1095 chr11 27218642 27218852 + 13.4 0.000 promoter-TSS (NR_125768) promoter-TSS (NR_125768) 21 NR_125768 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr12-5337 chr12 115433579 115433789 + 13.4 0.000 Intergenic Intergenic 714970 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr1-3628 chr1 46719186 46719396 + 13.4 0.000 promoter-TSS (NM_014774) promoter-TSS (NM_014774) -177 NM_014774 9813 Hs.707688 NM_014774 ENSG00000159658 EFCAB14 KIAA0494 EF-hand calcium binding domain 14 protein-coding chr1-6478 chr1 21037907 21038117 + 13.4 0.000 intron (NM_003760, intron 2 of 31) intron (NM_003760, intron 2 of 31) -49580 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr20-2524 chr20 34752265 34752475 + 13.4 0.000 intron (NM_001242539, intron 6 of 11) intron (NM_001242539, intron 6 of 11) 30034 NM_001242539 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding chr6-1555 chr6 150130567 150130777 + 13.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -12372 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr2-4488 chr2 2309788 2309998 + 13.4 0.000 intron (NM_015025, intron 1 of 24) intron (NM_015025, intron 1 of 24) -9339 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr6-1480 chr6 44064608 44064818 + 13.4 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 9939 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr12-1832 chr12 22230297 22230507 + 13.4 0.000 intron (NM_003034, intron 4 of 4) intron (NM_003034, intron 4 of 4) 104312 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr8-2952 chr8 42908730 42908940 + 13.4 0.000 intron (NM_032410, intron 2 of 21) L1MA7|LINE|L1 11857 NM_032410 84376 Hs.162852 NM_032410 ENSG00000168172 HOOK3 HK3 hook microtubule tethering protein 3 protein-coding chr17-4043 chr17 77526368 77526578 + 13.4 0.000 promoter-TSS (NR_148967) promoter-TSS (NR_148967) -528 NR_148967 400622 Hs.514516 NR_148967 LOC400622 - uncharacterized LOC400622 ncRNA chr12-1338 chr12 123270503 123270713 + 13.4 0.000 promoter-TSS (NM_001270433) promoter-TSS (NM_001270433) -325 NM_001270433 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr1-3986 chr1 156347330 156347540 + 13.4 0.000 TTS (NM_144627) TTS (NM_144627) 8533 NM_001304820 128229 Hs.534539 NM_144627 ENSG00000163467 TSACC C1orf182|SIP|SSTK-IP TSSK6 activating cochaperone protein-coding chr19-2475 chr19 3309425 3309635 + 13.4 0.000 Intergenic Intergenic -50100 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chrX-564 chrX 44382989 44383199 + 13.4 0.000 Intergenic Intergenic -39422 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr14-2552 chr14 27682086 27682296 + 13.4 0.000 Intergenic Intergenic -8970 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chr16-843 chr16 641541 641751 + 13.4 0.000 promoter-TSS (NM_138418) promoter-TSS (NM_138418) -182 NR_138607 84331 Hs.706105 NM_032371 ENSG00000172366 MCRIP2 C16orf14|FAM195A|c349E10.1 MAPK regulated corepressor interacting protein 2 protein-coding chr7-1553 chr7 22500273 22500483 + 13.4 0.000 promoter-TSS (NM_207342) promoter-TSS (NM_207342) -96 NM_207342 256227 Hs.729825 NM_207342 ENSG00000105889 STEAP1B - STEAP family member 1B protein-coding chr1-2925 chr1 32754526 32754736 + 13.4 0.000 intron (NM_001369553, intron 1 of 6) intron (NM_001369553, intron 1 of 6) 632 NM_001369553 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr8-2725 chr8 101159032 101159242 + 13.4 0.000 Intergenic L2c|LINE|L2 46536 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr14-578 chr14 102077268 102077478 + 13.4 0.000 Intergenic 7SLRNA|srpRNA|srpRNA 9671 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr11-6909 chr11 107623621 107623831 + 13.4 0.000 intron (NM_018712, intron 2 of 11) L2c|LINE|L2 32579 NM_018712 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr13-1189 chr13 46491630 46491840 + 13.4 0.000 Intergenic MIR|SINE|MIR -24959 NR_120426 101929344 Hs.491939 NR_120426 LINC01198 - long intergenic non-protein coding RNA 1198 ncRNA chr1-1740 chr1 149927804 149928014 + 13.4 0.000 promoter-TSS (NM_005850) promoter-TSS (NM_005850) -106 NM_005850 10262 Hs.516160 NM_005850 ENSG00000143368 SF3B4 AFD1|Hsh49|SAP49|SF3b49 splicing factor 3b subunit 4 protein-coding chr10-3901 chr10 68086252 68086462 + 13.4 0.000 Intergenic L2c|LINE|L2 -11074 NM_001278186 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr4-5772 chr4 73252365 73252575 + 13.4 0.000 intron (NM_032217, intron 1 of 33) intron (NM_032217, intron 1 of 33) 6328 NM_015574 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chr10-3270 chr10 127856648 127856858 + 13.4 0.000 Intergenic Intergenic 36188 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chrX-426 chrX 41924326 41924536 + 13.4 0.000 promoter-TSS (NM_001367721) promoter-TSS (NM_001367721) -877 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr1-1625 chr1 153572616 153572826 + 13.4 0.000 Intergenic MIRb|SINE|MIR -6877 NM_005978 6273 Hs.516484 NM_005978 ENSG00000196754 S100A2 CAN19|S100L S100 calcium binding protein A2 protein-coding chr13-460 chr13 28679730 28679940 + 13.4 0.000 TTS (NM_015932) TTS (NM_015932) 20705 NM_015932 51371 Hs.268742 NM_015932 ENSG00000132963 POMP C13orf12|HSPC014|PNAS-110|PRAAS2|UMP1 proteasome maturation protein protein-coding GL000225.1-15 GL000225.1 92008 92218 + 13.4 0.000 NA NA NA NA chr6-1699 chr6 19837936 19838146 + 13.4 0.000 exon (NM_001546, exon 1 of 3) exon (NM_001546, exon 1 of 3) 671 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr3-1909 chr3 169085817 169086027 + 13.4 0.000 intron (NM_001163999, intron 14 of 14) intron (NM_001163999, intron 14 of 14) 59601 NM_001366472 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr8-1320 chr8 17527972 17528182 + 13.4 0.000 intron (NM_001370338, intron 2 of 12) L2c|LINE|L2 -10700 NM_001164771 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr5-3715 chr5 15877793 15878003 + 13.4 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -57284 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr6-783 chr6 108559497 108559707 + 13.4 0.000 promoter-TSS (NM_201559) promoter-TSS (NM_201559) -223 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr1-2187 chr1 46643396 46643606 + 13.4 0.000 intron (NM_022745, intron 7 of 8) intron (NM_022745, intron 7 of 8) 22377 NM_001256418 64756 Hs.100874 NM_022745 ENSG00000123472 ATPAF1 ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding chr6-1880 chr6 112245850 112246060 + 13.4 0.000 intron (NR_121193, intron 2 of 2) intron (NR_121193, intron 2 of 2) 8612 NM_002290 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr9-2041 chr9 3746491 3746701 + 13.4 0.000 Intergenic Intergenic 78510 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chr8-3320 chr8 30637788 30637998 + 13.4 0.000 promoter-TSS (NM_001206847) promoter-TSS (NM_001206847) -687 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr2-4687 chr2 218165307 218165517 + 13.4 0.000 intron (NM_000634, intron 1 of 1) intron (NM_000634, intron 1 of 1) 1550 NM_000634 3577 Hs.194778 NM_000634 ENSG00000163464 CXCR1 C-C|C-C-CKR-1|CD128|CD181|CDw128a|CKR-1|CMKAR1|IL8R1|IL8RA|IL8RBA C-X-C motif chemokine receptor 1 protein-coding chr12-3626 chr12 83630407 83630617 + 13.4 0.000 Intergenic MER70C|LTR|ERVL 943357 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr19-4873 chr19 39652649 39652859 + 13.4 0.000 Intergenic L1PA6|LINE|L1 -3159 NM_001190441 148003 Hs.667238 NM_001190441 ENSG00000249861 LGALS16 - galectin 16 protein-coding chr10-742 chr10 101060966 101061176 + 13.4 0.000 promoter-TSS (NM_001319303) promoter-TSS (NM_001319303) -171 NR_135067 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr21-539 chr21 41770190 41770400 + 13.4 0.000 Intergenic Intergenic -3243 NM_020639 54101 Hs.517310 NM_020639 ENSG00000183421 RIPK4 ANKK2|ANKRD3|CHANDS|DIK|NKRD3|PKK|PPS2|RIP4 receptor interacting serine/threonine kinase 4 protein-coding chr19-3441 chr19 19279720 19279930 + 13.4 0.000 intron (NM_172231, intron 9 of 13) intron (NM_172231, intron 9 of 13) -6524 NM_001001524 53345 Hs.531624 NM_203510 ENSG00000213996 TM6SF2 - transmembrane 6 superfamily member 2 protein-coding chr3-1949 chr3 10685295 10685505 + 13.4 0.000 Intergenic Intergenic -58593 NR_046766 100874325 Hs.143004 NR_046766 ENSG00000224771 ATP2B2-IT2 - ATP2B2 intronic transcript 2 ncRNA chr14-213 chr14 53953489 53953699 + 13.4 0.000 promoter-TSS (NM_001347915) promoter-TSS (NM_001347915) -119 NM_001347914 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr4-2534 chr4 57484896 57485106 + 13.4 0.000 Intergenic Intergenic 59129 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr15-3454 chr15 92434952 92435162 + 13.4 0.000 intron (NM_001330416, intron 2 of 4) intron (NM_001330416, intron 2 of 4) 36489 NR_126501 104613533 Hs.97584 NR_126501 ENSG00000259170 LOC104613533 - uncharacterized LOC104613533 ncRNA chr3-2119 chr3 57951497 57951707 + 13.4 0.000 Intergenic Intergenic -56820 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr6-2610 chr6 125787922 125788132 + 13.4 0.000 intron (NM_001199619, intron 2 of 16) MIR|SINE|MIR -2933 NM_001122842 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr8-822 chr8 26449007 26449217 + 13.4 0.000 Intergenic CpG 58699 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr14-202 chr14 74881739 74881949 + 13.4 0.000 promoter-TSS (NM_001933) promoter-TSS (NM_001933) -72 NM_001933 1743 Hs.525459 NM_001933 ENSG00000119689 DLST DLTS dihydrolipoamide S-succinyltransferase protein-coding chr1-5110 chr1 147095755 147095965 + 13.4 0.000 Intergenic AluSx1|SINE|Alu -11104 NR_121645 101447996 NR_121645 ENSG00000286172 RNVU1-8 RNU1-145|vU1.8 RNA, variant U1 small nuclear 8 snRNA chr9-3124 chr9 80874583 80874793 + 13.4 0.000 Intergenic Intergenic 814847 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr1-10750 chr1 199571950 199572160 + 13.4 0.000 Intergenic MIRc|SINE|MIR 423457 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr10-2642 chr10 91588290 91588500 + 13.4 0.000 intron (NR_024467, intron 1 of 4) MIRb|SINE|MIR 23065 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chrX-1258 chrX 102976798 102977008 + 13.4 0.000 Intergenic Intergenic 39631 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr16-2494 chr16 88869377 88869587 + 13.4 0.000 Intergenic Intergenic -2822 NM_001080487 390748 Hs.730522 NM_001080487 ENSG00000205022 PABPN1L PABPNL1|ePABP2 poly(A) binding protein nuclear 1 like, cytoplasmic protein-coding chr8-1154 chr8 17735968 17736178 + 13.4 0.000 intron (NM_001363057, intron 3 of 14) L2a|LINE|L2 -13498 NM_001166393 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr6-5142 chr6 124442651 124442861 + 13.4 0.000 intron (NM_001300738, intron 4 of 7) ERV3-16A3_I-int|LTR|ERVL 159751 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr5-1293 chr5 9479406 9479616 + 13.4 0.000 intron (NM_003966, intron 1 of 22) MIRb|SINE|MIR -31822 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr4-1586 chr4 15336522 15336732 + 13.4 0.000 intron (NR_125911, intron 1 of 5) MLT1J1|LTR|ERVL-MaLR -3361 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr1-7602 chr1 246735071 246735281 + 13.4 0.000 intron (NM_016002, intron 2 of 11) intron (NM_016002, intron 2 of 11) 10767 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr18-1928 chr18 34425327 34425537 + 13.4 0.000 Intergenic L1PA7|LINE|L1 -67858 NM_032975 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr8-2069 chr8 124476156 124476366 + 13.4 0.000 intron (NM_007218, intron 1 of 1) intron (NM_007218, intron 1 of 1) 1494 NM_007218 11236 Hs.744151 NM_007218 ENSG00000170881 RNF139 HRCA1|RCA1|TRC8 ring finger protein 139 protein-coding chr7-2227 chr7 129140920 129141130 + 13.4 0.000 Intergenic AluSz6|SINE|Alu -3682 NM_178562 340348 Hs.27267 NM_178562 ENSG00000158457 TSPAN33 PEN|PEN.|TSPAN-33 tetraspanin 33 protein-coding chr5-5532 chr5 145161716 145161926 + 13.4 0.000 Intergenic Intergenic 673521 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr7-3216 chr7 139243141 139243351 + 13.4 0.000 intron (NM_173569, intron 2 of 17) intron (NM_173569, intron 2 of 17) 12009 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr5-1746 chr5 177061535 177061745 + 13.4 0.000 intron (NR_131773, intron 4 of 5) intron (NR_131773, intron 4 of 5) -25275 NM_213647 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr2-3583 chr2 48796698 48796908 + 13.4 0.000 Intergenic L2c|LINE|L2 -41079 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr1-2999 chr1 207565627 207565837 + 13.4 0.000 intron (NM_000573, intron 15 of 38) intron (NM_000573, intron 15 of 38) 69575 NM_000573 1378 Hs.334019 NM_000573 ENSG00000203710 CR1 C3BR|C4BR|CD35|KN complement C3b/C4b receptor 1 (Knops blood group) protein-coding chr11-3112 chr11 33742509 33742719 + 13.4 0.000 3' UTR (NM_033406, exon 10 of 10) 3' UTR (NM_033406, exon 10 of 10) -6135 NM_000611 966 Hs.278573 NM_000611 ENSG00000085063 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule (CD59 blood group) protein-coding chr1-2625 chr1 109740166 109740376 + 13.4 0.000 non-coding (NR_024537, exon 2 of 8) non-coding (NR_024537, exon 2 of 8) 767 NM_000849 2947 Hs.2006 NM_000849 ENSG00000134202 GSTM3 GST5|GSTB|GSTM3-3|GTM3 glutathione S-transferase mu 3 protein-coding chr7-1910 chr7 1948124 1948334 + 13.4 0.000 intron (NM_001013837, intron 16 of 18) intron (NM_001013837, intron 16 of 18) -7658 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr17-1443 chr17 32321097 32321307 + 13.4 0.000 exon (NM_001330181, exon 8 of 8) exon (NM_001330181, exon 8 of 8) 20971 NM_022344 64149 Hs.655257 NM_022344 ENSG00000108666 C17orf75 NJMU-R1|SRI2 chromosome 17 open reading frame 75 protein-coding chr8-2340 chr8 21659831 21660041 + 13.4 0.000 Intergenic Intergenic 128939 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr19-1798 chr19 623552 623762 + 13.4 0.000 intron (NM_005035, intron 5 of 20) intron (NM_005035, intron 5 of 20) 9880 NM_005035 5442 Hs.254113 NM_005035 ENSG00000099821 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL RNA polymerase mitochondrial protein-coding chr19-2241 chr19 48369892 48370102 + 13.4 0.000 intron (NM_012451, intron 2 of 4) intron (NM_012451, intron 2 of 4) 5630 NM_012451 23546 Hs.408333 NM_012451 ENSG00000105467 SYNGR4 - synaptogyrin 4 protein-coding chr7-2704 chr7 27399217 27399427 + 13.4 0.000 Intergenic MIR3|SINE|MIR -152093 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr8-2181 chr8 110026543 110026753 + 13.4 0.000 Intergenic Intergenic -50877 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr12-2190 chr12 9648620 9648830 + 13.4 0.000 promoter-TSS (NR_157802) promoter-TSS (NR_157802) 678 NR_046446 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2 member D pseudogene pseudo chr12-592 chr12 52023715 52023925 + 13.4 0.000 intron (NM_001202233, intron 1 of 7) CpG 988 NM_001202233 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr1-1659 chr1 9282026 9282236 + 13.4 0.000 Intergenic Intergenic -10763 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr18-662 chr18 48955892 48956102 + 13.4 0.000 Intergenic Intergenic -5286 NM_001190821 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr11-1571 chr11 111871065 111871275 + 13.4 0.000 non-coding (NR_147984, exon 1 of 16) non-coding (NR_147984, exon 1 of 16) 111 NM_001352419 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chr3-3169 chr3 178793847 178794057 + 13.4 0.000 intron (NR_126560, intron 2 of 7) intron (NR_126560, intron 2 of 7) 66453 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr8-1790 chr8 95303890 95304100 + 13.4 0.000 intron (NR_038208, intron 2 of 3) LTR78|LTR|ERV1 -34794 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr1-10145 chr1 106966697 106966907 + 13.4 0.000 Intergenic L2a|LINE|L2 -89872 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr1-5680 chr1 44836055 44836265 + 13.4 0.000 intron (NM_003738, intron 2 of 21) MLT1L|LTR|ERVL-MaLR 6784 NM_001166292 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr10-2671 chr10 98098072 98098282 + 13.4 0.000 Intergenic L2b|LINE|L2 -36447 NM_001256620 27291 Hs.419800 NM_014472 ENSG00000166024 R3HCC1L C10orf28|GIDRP86|GIDRP88|PSORT R3H domain and coiled-coil containing 1 like protein-coding chr2-2542 chr2 202172647 202172857 + 13.4 0.000 intron (NM_001277372, intron 15 of 23) intron (NM_001277372, intron 15 of 23) -55694 NR_135244 729224 Hs.623895 NR_135243 KIAA2012-AS1 - KIAA2012 antisense RNA 1 ncRNA chr2-3714 chr2 224865234 224865444 + 13.4 0.000 intron (NM_001290263, intron 11 of 55) intron (NM_001290263, intron 11 of 55) 81710 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr6-624 chr6 36766120 36766330 + 13.4 0.000 intron (NM_020939, intron 10 of 20) intron (NM_020939, intron 10 of 20) -8816 NM_001314018 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr6-1082 chr6 50850046 50850256 + 13.4 0.000 Intergenic Intergenic 31280 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr12-1468 chr12 6548100 6548310 + 13.4 0.000 intron (NM_001039670, intron 7 of 9) intron (NM_001039670, intron 7 of 9) 7837 NM_001039670 25900 Hs.15243 NM_015438 ENSG00000010295 IFFO1 HOM-TES-103|IFFO intermediate filament family orphan 1 protein-coding chr16-2291 chr16 7632578 7632788 + 13.4 0.000 intron (NM_145893, intron 8 of 13) intron (NM_145893, intron 8 of 13) 299838 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr20-993 chr20 57417118 57417328 + 13.4 0.000 Intergenic Intergenic -24167 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA chr2-4271 chr2 230153457 230153667 + 13.4 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 66422 NM_004510 3431 Hs.145150 NM_004509 ENSG00000135899 SP110 IFI41|IFI75|IPR1|VODI SP110 nuclear body protein protein-coding chr10-1679 chr10 132023298 132023508 + 13.4 0.000 Intergenic L1ME2z|LINE|L1 -41390 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr9-1850 chr9 16207352 16207562 + 13.4 0.000 intron (NM_001364979, intron 3 of 3) intron (NM_001364979, intron 3 of 3) 45650 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr18-863 chr18 34342906 34343116 + 13.4 0.000 Intergenic Intergenic -119460 NM_001353237 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr9-1940 chr9 28051734 28051944 + 13.4 0.000 intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) -477973 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr17-1244 chr17 12789391 12789601 + 13.4 0.000 promoter-TSS (NM_001321168) promoter-TSS (NM_001321168) -2 NM_001321164 9912 Hs.499758 NM_014859 ENSG00000006740 ARHGAP44 NPC-A-10|RICH2 Rho GTPase activating protein 44 protein-coding chr12-2566 chr12 111182293 111182503 + 13.4 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 82394 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr1-5023 chr1 78101620 78101830 + 13.4 0.000 intron (NM_001304725, intron 3 of 5) intron (NM_001304725, intron 3 of 5) 55759 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr16-1071 chr16 31179880 31180090 + 13.4 0.000 promoter-TSS (NM_001170634) promoter-TSS (NM_001170634) -125 NM_004960 2521 Hs.46894 NM_004960 ENSG00000089280 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding chrX-2173 chrX 38746801 38747011 + 13.4 0.000 Intergenic HERVL-int|LTR|ERVL -54526 NM_021242 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr3-3290 chr3 130395656 130395866 + 13.4 0.000 intron (NM_001278298, intron 8 of 40) intron (NM_001278298, intron 8 of 40) 50245 NR_022012 256076 Hs.205403 NM_153264 ENSG00000172752 COL6A5 COL29A1|VWA4 collagen type VI alpha 5 chain protein-coding chr5-2075 chr5 150449766 150449976 + 13.4 0.000 promoter-TSS (NM_001025070) promoter-TSS (NM_001025070) -132 NM_005617 6208 Hs.744846 NM_005617 ENSG00000164587 RPS14 EMTB|S14 ribosomal protein S14 protein-coding chr8-2804 chr8 123840113 123840323 + 13.4 0.000 Intergenic Charlie21a|DNA|hAT-Charlie -11769 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chr3-3271 chr3 86867926 86868136 + 13.4 0.000 Intergenic Intergenic 123118 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr9-1675 chr9 70574394 70574604 + 13.4 0.000 intron (NM_001366143, intron 21 of 25) L2b|LINE|L2 -159842 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr7-3480 chr7 2224231 2224441 + 13.4 0.000 intron (NM_001304524, intron 1 of 16) intron (NM_001304524, intron 1 of 16) 8609 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr16-1644 chr16 20675238 20675448 + 13.4 0.000 intron (NR_134918, intron 3 of 10) HERV15-int|LTR|ERV1 15913 NM_052956 116285 Hs.306812 NM_052956 ENSG00000166743 ACSM1 BUCS1|MACS1 acyl-CoA synthetase medium chain family member 1 protein-coding chr2-3105 chr2 141767091 141767301 + 13.4 0.000 intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 364505 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr7-5626 chr7 54126929 54127139 + 13.4 0.000 Intergenic HERVL-int|LTR|ERVL -203663 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr22-2881 chr22 45831027 45831237 + 13.4 0.000 intron (NM_013236, intron 10 of 11) L1MB3|LINE|L1 70608 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr11-4551 chr11 122157142 122157352 + 13.4 0.000 promoter-TSS (NR_137194) promoter-TSS (NR_137194) -134 NR_137186 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr4-1604 chr4 39665335 39665545 + 13.4 0.000 Intergenic Intergenic -26575 NM_001317896 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr5-1161 chr5 176415952 176416162 + 13.4 0.000 intron (NR_045724, intron 1 of 5) intron (NR_045724, intron 1 of 5) 482 NM_001834 1212 Hs.484241 NM_001834 ENSG00000175416 CLTB LCB clathrin light chain B protein-coding chr5-1308 chr5 65198800 65199010 + 13.4 0.000 intron (NR_135689, intron 21 of 25) intron (NR_135689, intron 21 of 25) 283015 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr8-2065 chr8 123838130 123838340 + 13.4 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -13752 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chr3-3179 chr3 183386013 183386223 + 13.4 0.000 intron (NM_015078, intron 2 of 29) intron (NM_015078, intron 2 of 29) 42151 NM_015078 23101 Hs.208267 NM_015078 ENSG00000053524 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding chr4-5072 chr4 145861752 145861962 + 13.4 0.000 intron (NM_178835, intron 5 of 14) intron (NM_178835, intron 5 of 14) 76966 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr2-2669 chr2 222074682 222074892 + 13.4 0.000 Intergenic Intergenic -223360 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr2-3224 chr2 229058252 229058462 + 13.4 0.000 intron (NM_001330157, intron 1 of 1) intron (NM_001330157, intron 1 of 1) 173735 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr12-2397 chr12 40645436 40645646 + 13.4 0.000 Intergenic Intergenic -46898 NM_001843 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr5-3999 chr5 19929131 19929341 + 13.4 0.000 intron (NM_001349562, intron 2 of 13) intron (NM_001349562, intron 2 of 13) -42964 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr12-1350 chr12 11813081 11813291 + 13.4 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 163332 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr9-1748 chr9 129202923 129203133 + 13.4 0.000 Intergenic CpG -24767 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr17-2181 chr17 63692772 63692982 + 13.4 0.000 intron (NM_203351, intron 16 of 16) MLT1D|LTR|ERVL-MaLR 7248 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr4-2587 chr4 111960155 111960365 + 13.4 0.000 Intergenic Intergenic -185194 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr2-5219 chr2 46010810 46011020 + 13.4 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -286492 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr1-2274 chr1 234223014 234223224 + 13.4 0.000 intron (NM_001300845, intron 1 of 6) intron (NM_001300845, intron 1 of 6) 8908 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr3-3007 chr3 102745906 102746116 + 13.4 0.000 Intergenic Intergenic 310996 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr9-2095 chr9 85258887 85259097 + 13.4 0.000 Intergenic Intergenic 483037 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr2-2575 chr2 229922025 229922235 + 13.4 0.000 promoter-TSS (NM_001284215) promoter-TSS (NM_001284215) -121 NM_001348317 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr5-587 chr5 118988257 118988467 + 13.4 0.000 promoter-TSS (NM_001308081) promoter-TSS (NM_001308081) -142 NM_001308081 285605 Hs.655891 NM_173666 ENSG00000169570 DTWD2 - DTW domain containing 2 protein-coding chr3-5752 chr3 21333814 21334024 + 13.4 0.000 Intergenic L1MA7|LINE|L1 -71807 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr13-2478 chr13 51331579 51331789 + 13.4 0.000 Intergenic Intergenic -9348 NM_001101320 647174 Hs.685891 NM_001101320 ENSG00000253309 SERPINE3 - serpin family E member 3 protein-coding chr5-2520 chr5 158943090 158943300 + 13.4 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 154761 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr10-1838 chr10 33252755 33252965 + 13.4 0.000 intron (NM_001244973, intron 6 of 16) intron (NM_001244973, intron 6 of 16) 81807 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chrX-375 chrX 115047378 115047588 + 13.4 0.000 Intergenic LTR24B|LTR|ERV1 -29867 NM_000640 3598 Hs.336046 NM_000640 ENSG00000123496 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor subunit alpha 2 protein-coding chrX-1436 chrX 53800031 53800241 + 13.4 0.000 Intergenic L1ME3Cz|LINE|L1 -113417 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr6-3326 chr6 169640337 169640547 + 13.4 0.000 intron (NM_182552, intron 17 of 25) intron (NM_182552, intron 17 of 25) 61587 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr13-1586 chr13 39297798 39298008 + 13.4 0.000 Intergenic Intergenic 259447 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr7-4747 chr7 69217514 69217724 + 13.4 0.000 Intergenic Intergenic 380005 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr2-4088 chr2 135492531 135492741 + 13.4 0.000 intron (NM_001286569, intron 2 of 21) L1ME2z|LINE|L1 37949 NM_001286568 84083 Hs.658422 NM_032143 ENSG00000121988 ZRANB3 4933425L19Rik|AH2 zinc finger RANBP2-type containing 3 protein-coding chr17-3482 chr17 44953400 44953610 + 13.4 0.000 Intergenic L2b|LINE|L2 -5732 NM_001264573 146909 Hs.135094 NM_001080443 ENSG00000186185 KIF18B - kinesin family member 18B protein-coding chr3-1746 chr3 158105116 158105326 + 13.4 0.000 intron (NM_003030, intron 1 of 5) CpG 942 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr7-3818 chr7 96756190 96756400 + 13.4 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -46404 NM_006304 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr21-346 chr21 46500600 46500810 + 13.4 0.000 intron (NM_001146115, intron 5 of 19) intron (NM_001146115, intron 5 of 19) 38234 NR_046400 100862692 Hs.737163 NR_046400 ENSG00000223692 DIP2A-IT1 - DIP2A intronic transcript 1 ncRNA chr1-5370 chr1 245141735 245141945 + 13.4 0.000 Intergenic Intergenic -13145 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr9-2993 chr9 86405994 86406204 + 13.4 0.000 Intergenic Intergenic -51689 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr17-3763 chr17 32143145 32143355 + 13.4 0.000 promoter-TSS (NR_136413) promoter-TSS (NR_136413) -115 NR_136413 105371730 Hs.673781 NR_136413 ENSG00000214708 LOC105371730 - uncharacterized LOC105371730 ncRNA chr22-742 chr22 46754374 46754584 + 13.4 0.000 Intergenic Intergenic -8138 NM_001284304 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr2-3376 chr2 9890065 9890275 + 13.4 0.000 intron (NM_001318977, intron 7 of 13) L1MEc|LINE|L1 46696 NM_005680 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr16-4056 chr16 1518797 1519007 + 13.4 0.000 intron (NM_014714, intron 29 of 30) intron (NM_014714, intron 29 of 30) -9776 NM_001256541 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr7-1537 chr7 135679298 135679508 + 13.4 0.000 Intergenic Intergenic 16889 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr2-8783 chr2 166234207 166234417 + 13.4 0.000 intron (NM_001365536, intron 20 of 26) intron (NM_001365536, intron 20 of 26) -85151 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr7-720 chr7 135662339 135662549 + 13.4 0.000 promoter-TSS (NM_001130929) promoter-TSS (NM_001130929) -70 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr7-2671 chr7 7264829 7265039 + 13.4 0.000 intron (NR_108073, intron 2 of 3) MLT1E2|LTR|ERVL-MaLR 9780 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr9-2632 chr9 22097943 22098153 + 13.4 0.000 intron (NR_003529, intron 14 of 18) intron (NR_003529, intron 14 of 18) -88735 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr3-5175 chr3 65575361 65575571 + 13.4 0.000 intron (NM_001365904, intron 2 of 24) L1ME1|LINE|L1 -318350 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr2-2452 chr2 74178116 74178326 + 13.4 0.000 promoter-TSS (NM_001317111) promoter-TSS (NM_001317111) 93 NM_001317111 55233 Hs.602092 NM_018221 ENSG00000114978 MOB1A C2orf6|MATS1|MOB1|MOBK1B|MOBKL1B|Mob4B MOB kinase activator 1A protein-coding chr5-3274 chr5 111394606 111394816 + 13.4 0.000 exon (NM_001323375, exon 6 of 12) exon (NM_001323375, exon 6 of 12) -117515 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr18-1188 chr18 26459198 26459408 + 13.4 0.000 intron (NM_001258221, intron 4 of 4) FLAM_A|SINE|Alu 36308 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr8-1104 chr8 51962128 51962338 + 13.4 0.000 Intergenic L2a|LINE|L2 -63047 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr6-2395 chr6 147869231 147869441 + 13.4 0.000 Intergenic Intergenic 360646 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr6-3107 chr6 97397405 97397615 + 13.4 0.000 intron (NR_110757, intron 1 of 4) Plat_L3|LINE|CR1 91924 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr2-1817 chr2 75646710 75646920 + 13.4 0.000 promoter-TSS (NM_014763) promoter-TSS (NM_014763) 32 NM_014763 9801 Hs.44024 NM_014763 ENSG00000115364 MRPL19 L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15 mitochondrial ribosomal protein L19 protein-coding chr20-1240 chr20 35129623 35129833 + 13.4 0.000 intron (NM_001145025, intron 6 of 9) Tigger3b|DNA|TcMar-Tigger 17608 NM_018217 55741 Hs.720177 NM_018217 ENSG00000088298 EDEM2 C20orf31|C20orf49|bA4204.1 ER degradation enhancing alpha-mannosidase like protein 2 protein-coding chr10-4589 chr10 111217888 111218098 + 13.4 0.000 Intergenic L1MC4a|LINE|L1 103702 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr16-2421 chr16 74607975 74608185 + 13.4 0.000 promoter-TSS (NM_012201) promoter-TSS (NM_012201) -966 NM_001145667 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr12-1299 chr12 124338999 124339209 + 13.4 0.000 intron (NM_001077261, intron 38 of 47) (CCAC)n|Simple_repeat|Simple_repeat -1862 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr7-1331 chr7 2301138 2301348 + 13.4 0.000 intron (NM_013321, intron 1 of 10) intron (NM_013321, intron 1 of 10) 13198 NM_013321 29886 Hs.584900 NM_013321 ENSG00000106266 SNX8 Mvp1 sorting nexin 8 protein-coding chr8-1008 chr8 141075954 141076164 + 13.4 0.000 Intergenic Intergenic -52530 NM_001352890 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr4-1218 chr4 145098141 145098351 + 13.4 0.000 promoter-TSS (NM_001040876) promoter-TSS (NM_001040876) -27 NM_001256709 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr5-2164 chr5 111439598 111439808 + 13.4 0.000 intron (NM_001744, intron 5 of 10) L2|LINE|L2 -72523 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr5-1541 chr5 181244034 181244244 + 13.4 0.000 promoter-TSS (NM_006098) promoter-TSS (NM_006098) -233 NM_006098 10399 Hs.5662 NM_006098 ENSG00000204628 RACK1 GNB2L1|Gnb2-rs1|H12.3|HLC-7|PIG21 receptor for activated C kinase 1 protein-coding chr5-1064 chr5 157563516 157563726 + 13.4 0.000 intron (NM_033274, intron 3 of 22) intron (NM_033274, intron 3 of 22) 12154 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr6-2036 chr6 64045049 64045259 + 13.4 0.000 intron (NM_001292009, intron 33 of 43) intron (NM_001292009, intron 33 of 43) 238318 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr1-3426 chr1 3556768 3556978 + 13.4 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) 3917 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr18-1262 chr18 57209373 57209583 + 13.4 0.000 Intergenic Intergenic -38284 NR_149129 105372138 Hs.574448 NR_149129 ENSG00000267726 LINC02565 - long intergenic non-protein coding RNA 2565 ncRNA chr3-3006 chr3 102641955 102642165 + 13.4 0.000 Intergenic Intergenic 207045 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chrX-485 chrX 133104400 133104610 + 13.4 0.000 Intergenic L1MEf|LINE|L1 -76233 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding chr8-1224 chr8 116289959 116290169 + 13.4 0.000 intron (NR_046215, intron 1 of 13) intron (NR_046215, intron 1 of 13) 34995 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr6-1163 chr6 28137295 28137505 + 13.4 0.000 promoter-TSS (NR_103455) promoter-TSS (NR_103455) -84 NR_103456 100129195 Hs.659413 NR_103455 ENSG00000269293 ZSCAN16-AS1 - ZSCAN16 antisense RNA 1 ncRNA chr4-1442 chr4 118278617 118278827 + 13.4 0.000 promoter-TSS (NR_003584) promoter-TSS (NR_003584) -40 NR_003584 100093630 Hs.535762 NR_003584 ENSG00000269893 SNHG8 LINC00060|NCRNA00060 small nucleolar RNA host gene 8 ncRNA chr9-3676 chr9 98805441 98805651 + 13.4 0.000 Intergenic MIR|SINE|MIR -2124 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chr4-2199 chr4 123340333 123340543 + 13.4 0.000 Intergenic Intergenic -56357 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr10-1490 chr10 717484 717694 + 13.4 0.000 Intergenic Intergenic -27921 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr17-3618 chr17 1935109 1935319 + 13.4 0.000 3' UTR (NM_178568, exon 2 of 2) 3' UTR (NM_178568, exon 2 of 2) -82502 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr6-2335 chr6 119533657 119533867 + 13.4 0.000 Intergenic Intergenic -16046 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr5-2394 chr5 97044090 97044300 + 13.4 0.000 Intergenic Intergenic 85762 NM_175920 4012 Hs.527199 NM_005575 ENSG00000113441 LNPEP CAP|IRAP|P-LAP|PLAP leucyl and cystinyl aminopeptidase protein-coding chr18-905 chr18 58195393 58195603 + 13.4 0.000 promoter-TSS (NM_001144970) promoter-TSS (NM_001144970) 93 NM_001144970 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr2-1935 chr2 215657979 215658189 + 13.4 0.000 intron (NR_037195, intron 5 of 9) intron (NR_037195, intron 5 of 9) -59959 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr16-2347 chr16 51880901 51881111 + 13.4 0.000 Intergenic Intergenic 118487 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr20-1241 chr20 35307024 35307234 + 13.4 0.000 intron (NM_199487, intron 7 of 8) intron (NM_199487, intron 7 of 8) -14704 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr19-1411 chr19 45017109 45017319 + 13.4 0.000 intron (NM_006509, intron 3 of 10) intron (NM_006509, intron 3 of 10) 15750 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr1-3549 chr1 227896013 227896223 + 13.4 0.000 Intergenic Intergenic 45565 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr4-2101 chr4 48287981 48288191 + 13.4 0.000 Intergenic MER21A|LTR|ERVL -18248 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr2-5057 chr2 2069112 2069322 + 13.4 0.000 intron (NM_015025, intron 3 of 24) L1PA7|LINE|L1 -250015 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr13-464 chr13 32804626 32804836 + 13.4 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 106921 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr11-3437 chr11 64210573 64210783 + 13.4 0.000 exon (NM_031471, exon 3 of 15) exon (NM_031471, exon 3 of 15) 3957 NM_031471 83706 Hs.180535 NM_031471 ENSG00000149781 FERMT3 KIND3|MIG-2|MIG2B|UNC112C|URP2|URP2SF fermitin family member 3 protein-coding chr17-4129 chr17 81951835 81952045 + 13.4 0.000 TTS (NM_178493) TTS (NM_178493) -4707 NM_001145113 255275 Hs.729645 NM_001145113 ENSG00000185105 MYADML2 - myeloid associated differentiation marker like 2 protein-coding chr5-2250 chr5 15222625 15222835 + 13.4 0.000 intron (NR_109944, intron 2 of 2) LTR16A|LTR|ERVL 43830 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr11-3229 chr11 69114746 69114956 + 13.4 0.000 Intergenic Intergenic 31675 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr11-2943 chr11 73351330 73351540 + 13.4 0.000 intron (NM_014786, intron 2 of 20) intron (NM_014786, intron 2 of 20) -24964 NM_152222 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr2-1627 chr2 238132386 238132596 + 13.4 0.000 3' UTR (NM_001308370, exon 4 of 4) 3' UTR (NM_001308370, exon 4 of 4) 5101 NM_001308370 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr7-4024 chr7 151881053 151881263 + 13.4 0.000 Intergenic Charlie10|DNA|hAT-Charlie -4043 NM_016203 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr13-511 chr13 28537096 28537306 + 13.4 0.000 Intergenic Intergenic -42073 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr6-890 chr6 108558524 108558734 + 13.4 0.000 Intergenic CpG -1196 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr16-3797 chr16 35521060 35521270 + 13.4 0.000 Intergenic HERVK3-int|LTR|ERVK -13995 NR_034018 100130700 Hs.97712 NR_034018 TP53TG3HP - TP53 target 3 family member H, pseudogene pseudo chr16-963 chr16 89891421 89891631 + 13.4 0.000 intron (NM_014972, intron 5 of 17) intron (NM_014972, intron 5 of 17) 17934 NM_014972 22980 Hs.415342 NM_014972 ENSG00000141002 TCF25 FKSG26|Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 protein-coding chr7-2871 chr7 116380163 116380373 + 13.4 0.000 Intergenic Intergenic -93541 NR_130922 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr8-2136 chr8 15505497 15505707 + 13.4 0.000 Intergenic Intergenic -34485 NM_178234 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr15-460 chr15 43133697 43133907 + 13.4 0.000 non-coding (NR_144542, exon 1 of 13) non-coding (NR_144542, exon 1 of 13) 216 NM_024956 80021 Hs.511175 NM_024956 ENSG00000137842 TMEM62 - transmembrane protein 62 protein-coding chr1-2064 chr1 19596695 19596905 + 13.4 0.000 promoter-TSS (NR_135054) promoter-TSS (NR_135054) 32 NR_135054 105378614 Hs.430098 NR_135054 ENSG00000235185 LOC105378614 - uncharacterized LOC105378614 ncRNA chr12-3532 chr12 132508641 132508851 + 13.4 0.000 intron (NM_001142641, intron 2 of 16) CpG 18595 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr2-8332 chr2 108101712 108101922 + 13.4 0.000 Intergenic LTR19A|LTR|ERV1 -49062 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA chr21-317 chr21 29104512 29104722 + 13.4 0.000 intron (NM_001286634, intron 5 of 7) intron (NM_001286634, intron 5 of 7) 12363 NM_001286619 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr12-954 chr12 103859160 103859370 + 13.4 0.000 intron (NR_027249, intron 13 of 15) intron (NR_027249, intron 13 of 15) -18031 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr11-2569 chr11 109247142 109247352 + 13.4 0.000 Intergenic MER44D|DNA|TcMar-Tigger -174943 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr14-1005 chr14 103880619 103880829 + 13.4 0.000 Intergenic Intergenic 33003 NR_038436 145216 Hs.578091 NR_038436 ENSG00000258735 LINC00637 - long intergenic non-protein coding RNA 637 ncRNA chr3-2800 chr3 7418632 7418842 + 13.4 0.000 intron (NM_000844, intron 5 of 9) intron (NM_000844, intron 5 of 9) 116547 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr4-2797 chr4 27316498 27316708 + 13.4 0.000 Intergenic MER54B|LTR|ERVL 99124 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr2-8864 chr2 175870517 175870727 + 13.4 0.000 Intergenic Intergenic 131645 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr10-988 chr10 130190227 130190437 + 13.4 0.000 Intergenic CpG 53923 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr2-2634 chr2 104769023 104769233 + 13.4 0.000 Intergenic Intergenic -11409 NR_038231 284998 Hs.410180 NR_038231 ENSG00000234177 LINC01114 PANCAT long intergenic non-protein coding RNA 1114 ncRNA chr10-1913 chr10 132453285 132453495 + 13.4 0.000 Intergenic CpG 8201 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr7-1149 chr7 91967625 91967835 + 13.4 0.000 intron (NM_147185, intron 1 of 49) L1MA4|LINE|L1 26855 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr3-5771 chr3 23783216 23783426 + 13.4 0.000 Intergenic L2a|LINE|L2 -22634 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr18-879 chr18 44781930 44782140 + 13.4 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 101147 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr3-2594 chr3 142998482 142998692 + 13.4 0.000 intron (NR_125393, intron 4 of 4) intron (NR_125393, intron 4 of 4) 2880 NR_034032 100289361 Hs.599649 NR_034032 ENSG00000268129 LOC100289361 - uncharacterized LOC100289361 ncRNA chr16-1684 chr16 88628775 88628985 + 13.4 0.000 intron (NM_001294340, intron 17 of 18) intron (NM_001294340, intron 17 of 18) -9692 NM_013278 27189 Hs.278911 NM_013278 ENSG00000124391 IL17C CX2|IL-17C interleukin 17C protein-coding chr8-4095 chr8 68751043 68751253 + 13.4 0.000 intron (NM_001349479, intron 9 of 11) intron (NM_001349479, intron 9 of 11) 353042 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr3-981 chr3 186617139 186617349 + 13.4 0.000 exon (NM_001354571, exon 4 of 7) exon (NM_001354571, exon 4 of 7) 4184 NM_001622 197 Hs.324746 NM_001622 ENSG00000145192 AHSG A2HS|AHS|APMR1|FETUA|HSGA alpha 2-HS glycoprotein protein-coding chr1-2634 chr1 147669470 147669680 + 13.4 0.000 non-coding (NR_136636, exon 1 of 9) non-coding (NR_136636, exon 1 of 9) 949 NR_136636 51205 Hs.562154 NM_016361 ENSG00000162836 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding chr3-6050 chr3 50368506 50368716 + 13.4 0.000 TTS (NR_111914) TTS (NR_111914) 3248 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr6-1397 chr6 116144751 116144961 + 13.4 0.000 intron (NM_152729, intron 6 of 11) intron (NM_152729, intron 6 of 11) -18724 NM_000493 1300 Hs.520339 NM_000493 ENSG00000123500 COL10A1 - collagen type X alpha 1 chain protein-coding chr19-2055 chr19 5404022 5404232 + 13.4 0.000 Intergenic Intergenic -51290 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr6-4714 chr6 58020741 58020951 + 13.4 0.000 Intergenic Intergenic -59400 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr8-1153 chr8 15644171 15644381 + 13.4 0.000 intron (NM_001356429, intron 2 of 10) intron (NM_001356429, intron 2 of 10) 104013 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr5-5271 chr5 122156808 122157018 + 13.4 0.000 Intergenic Intergenic -3263 NM_001195535 100505841 Hs.733368 NM_001195535 LOC100505841 - zinc finger protein 474-like protein-coding chr21-326 chr21 38930868 38931078 + 13.4 0.000 intron (NR_120405, intron 1 of 3) intron (NR_120405, intron 1 of 3) 7456 NR_120405 400867 Hs.689509 NR_120405 LOC400867 - uncharacterized LOC400867 ncRNA chr17-5854 chr17 67492259 67492469 + 13.4 0.000 intron (NM_181671, intron 1 of 9) MLT1D|LTR|ERVL-MaLR -20779 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr3-1233 chr3 115790797 115791007 + 13.4 0.000 Intergenic Intergenic 114224 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr7-1097 chr7 4668126 4668336 + 13.4 0.000 Intergenic Intergenic -14064 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr17-3939 chr17 60777514 60777724 + 13.4 0.000 intron (NM_001330413, intron 6 of 25) AluSz6|SINE|Alu 99768 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr6-1155 chr6 10838350 10838560 + 13.4 0.000 promoter-TSS (NM_001242385) promoter-TSS (NM_001242385) 84 NR_134935 4117 Hs.446125 NM_005906 ENSG00000111837 MAK RP62 male germ cell associated kinase protein-coding chr4-3127 chr4 169410922 169411132 + 13.4 0.000 intron (NM_001199400, intron 28 of 32) intron (NM_001199400, intron 28 of 32) -140071 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr2-5509 chr2 147511603 147511813 + 13.4 0.000 Intergenic Intergenic -332809 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr17-4284 chr17 74596607 74596817 + 13.4 0.000 Intergenic L1MC1|LINE|L1 -3128 NR_158152 101928343 Hs.93825 NR_158152 LOC101928343 - uncharacterized LOC101928343 ncRNA chr18-842 chr18 20960516 20960726 + 13.4 0.000 intron (NM_005406, intron 27 of 32) intron (NM_005406, intron 27 of 32) 151192 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr10-2759 chr10 122298854 122299064 + 13.4 0.000 intron (NM_001318189, intron 8 of 15) intron (NM_001318189, intron 8 of 15) 27663 NM_144587 118663 Hs.422466 NM_144587 ENSG00000138152 BTBD16 C10orf87 BTB domain containing 16 protein-coding chr7-2018 chr7 46604429 46604639 + 13.4 0.000 Intergenic MIRb|SINE|MIR 92588 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr3-3514 chr3 25428084 25428294 + 13.4 0.000 promoter-TSS (NM_000965) promoter-TSS (NM_000965) -74 NM_000965 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr16-1784 chr16 2095544 2095754 + 13.4 0.000 TTS (NR_135175) TTS (NR_135175) 4213 NR_135175 105371049 Hs.710709 NR_135175 ENSG00000259933 LOC105371049 - uncharacterized LOC105371049 ncRNA chr2-2984 chr2 37624165 37624375 + 13.4 0.000 Intergenic Intergenic 47929 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr7-3716 chr7 64375780 64375990 + 13.4 0.000 Intergenic BSR/Beta|Satellite|Satellite -57808 NR_029404 649395 Hs.728871 NR_029404 YWHAEP1 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1 pseudo chr11-3644 chr11 87776572 87776782 + 13.4 0.000 Intergenic Intergenic -57266 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr10-5926 chr10 120120435 120120645 + 13.4 0.000 Intergenic LTR16B|LTR|ERVL 162027 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr17-4837 chr17 59754568 59754778 + 13.4 0.000 intron (NM_001329401, intron 4 of 9) intron (NM_001329401, intron 4 of 9) 47019 NM_001329399 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding chr19-2685 chr19 16313070 16313280 + 13.4 0.000 Intergenic MER58B|DNA|hAT-Charlie -11651 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr19-2188 chr19 17244286 17244496 + 13.4 0.000 intron (NM_005234, intron 1 of 3) CpG 951 NM_005234 2063 Hs.466148 NM_005234 ENSG00000160113 NR2F6 EAR-2|EAR2|ERBAL2 nuclear receptor subfamily 2 group F member 6 protein-coding chr2-4063 chr2 120203355 120203565 + 13.4 0.000 Intergenic Intergenic 19940 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr1-3381 chr1 180586883 180587093 + 13.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 28014 NR_125716 148756 NR_125716 ENSG00000236719 OVAAL LINC01131|OVAL ovarian adenocarcinoma amplified long non-coding RNA ncRNA chr5-974 chr5 193148 193358 + 13.4 0.000 intron (NM_001080478, intron 1 of 1) intron (NM_001080478, intron 1 of 1) 1758 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chrX-804 chrX 67082296 67082506 + 13.4 0.000 Intergenic Intergenic -443103 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr15-876 chr15 69128932 69129142 + 13.4 0.000 Intergenic Intergenic -31560 NM_001324091 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr16-1399 chr16 88982972 88983182 + 13.4 0.000 Intergenic Intergenic -5870 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr4-1938 chr4 100543647 100543857 + 13.4 0.000 Intergenic L2a|LINE|L2 -25730 NM_016242 51705 Hs.152913 NM_016242 ENSG00000164035 EMCN EMCN2|MUC14 endomucin protein-coding chr8-1590 chr8 135577573 135577783 + 13.4 0.000 intron (NM_006558, intron 5 of 8) L1MC3|LINE|L1 120222 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr12-2146 chr12 109581978 109582188 + 13.4 0.000 intron (NM_000431, intron 5 of 10) intron (NM_000431, intron 5 of 10) 8289 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr1-2415 chr1 906915 907125 + 13.4 0.000 Intergenic Intergenic 12672 NR_026874 100130417 Hs.200644 NM_175912 ENSG00000223764 LINC02593 - long intergenic non-protein coding RNA 2593 ncRNA chr7-5310 chr7 25523290 25523500 + 13.4 0.000 Intergenic MER21B|LTR|ERVL 139745 NR_157828 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr1-4843 chr1 26983723 26983933 + 13.4 0.000 Intergenic Intergenic -9864 NM_001013642 388610 Hs.355747 NM_001013642 ENSG00000253368 TRNP1 C1orf225|TNRP|TRNP TMF1 regulated nuclear protein 1 protein-coding chr5-4108 chr5 74232416 74232626 + 13.4 0.000 Intergenic Intergenic 75804 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr3-1794 chr3 32865457 32865667 + 13.4 0.000 intron (NM_001039111, intron 1 of 3) intron (NM_001039111, intron 1 of 3) 47565 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr9-1368 chr9 5549989 5550199 + 13.4 0.000 intron (NM_025239, intron 4 of 6) LTR33|LTR|ERVL 39563 NM_025239 80380 Hs.532279 NM_025239 ENSG00000197646 PDCD1LG2 B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2 programmed cell death 1 ligand 2 protein-coding chr17-2050 chr17 56979061 56979271 + 13.4 0.000 intron (NM_021626, intron 1 of 12) FLAM_A|SINE|Alu 1059 NM_021626 59342 Hs.514950 NM_021626 ENSG00000121064 SCPEP1 HSCP1|RISC serine carboxypeptidase 1 protein-coding chr16-2332 chr16 30844861 30845071 + 13.4 0.000 intron (NM_001286526, intron 5 of 5) LTR41B|LTR|ERVL 30357 NR_039744 100616231 NR_039744 ENSG00000265991 MIR4519 - microRNA 4519 ncRNA chr2-2146 chr2 166411105 166411315 + 13.4 0.000 intron (NR_045628, intron 23 of 25) MER44C|DNA|TcMar-Tigger -35223 NM_002977 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr1-4781 chr1 15326588 15326798 + 13.4 0.000 TTS (NR_148918) TTS (NR_148918) 17190 NR_148918 101927417 Hs.715313 NR_148918 ENSG00000233485 LOC101927417 - uncharacterized LOC101927417 ncRNA chr12-1805 chr12 1443444 1443654 + 13.4 0.000 intron (NR_027948, intron 18 of 19) intron (NR_027948, intron 18 of 19) -56942 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr21-381 chr21 29335111 29335321 + 13.4 0.000 intron (NR_027655, intron 4 of 7) MIR|SINE|MIR 30012 NR_027655 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding chr2-9464 chr2 235048446 235048656 + 13.4 0.000 intron (NM_001371302, intron 4 of 5) AluJo|SINE|Alu 20816 NM_001371306 chr2-5602 chr2 177336380 177336590 + 13.4 0.000 intron (NR_026966, intron 2 of 8) intron (NR_026966, intron 2 of 8) -22603 NR_106767 102465255 NR_106767 ENSG00000278418 MIR6512 hsa-mir-6512|mir-6512 microRNA 6512 ncRNA chr14-335 chr14 88792774 88792984 + 13.4 0.000 promoter-TSS (NM_183387) promoter-TSS (NM_183387) 74 NM_183387 161436 Hs.325846 NM_183387 ENSG00000165521 EML5 EMAP-2|EMAP-5 EMAP like 5 protein-coding chr9-1219 chr9 128050861 128051071 + 13.4 0.000 Intergenic Intergenic 16354 NM_197956 203245 Hs.373606 NM_197956 ENSG00000171169 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding chr5-1454 chr5 50667870 50668080 + 13.4 0.000 intron (NM_001331028, intron 1 of 25) intron (NM_001331028, intron 1 of 25) 561 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding KI270516.1-1 KI270516.1 663 873 + 13.4 0.000 NA NA NA NA chr8-1946 chr8 52560698 52560908 + 13.4 0.000 intron (NM_207413, intron 1 of 4) intron (NM_207413, intron 1 of 4) 4627 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr19-1079 chr19 3227963 3228173 + 13.4 0.000 intron (NR_033342, intron 1 of 12) intron (NR_033342, intron 1 of 12) 2790 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr4-5562 chr4 144171222 144171432 + 13.4 0.000 Intergenic Intergenic -30609 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr3-902 chr3 129485743 129485953 + 13.4 0.000 intron (NM_052990, intron 12 of 26) intron (NM_052990, intron 12 of 26) -42791 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr3-5725 chr3 16614119 16614329 + 13.4 0.000 Intergenic Intergenic -8801 NM_001351 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr6-2114 chr6 1081590 1081800 + 13.4 0.000 intron (NR_027116, intron 1 of 3) intron (NR_027116, intron 1 of 3) 19637 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr12-1852 chr12 46787509 46787719 + 13.4 0.000 intron (NM_018018, intron 5 of 16) intron (NM_018018, intron 5 of 16) 38383 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr5-2257 chr5 17694992 17695202 + 13.4 0.000 Intergenic Intergenic -39459 NM_001355258 391769 NM_001355258 ENSG00000269466 H3.Y - histone cluster 2, H3c pseudogene protein-coding chr20-743 chr20 13030161 13030371 + 13.4 0.000 intron (NM_001349945, intron 2 of 12) intron (NM_001349945, intron 2 of 12) 21294 NM_018327 55304 Hs.425023 NM_018327 ENSG00000172296 SPTLC3 C20orf38|LCB 3|LCB2B|LCB3|SPT 3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b serine palmitoyltransferase long chain base subunit 3 protein-coding chr18-1060 chr18 23639961 23640171 + 13.4 0.000 intron (NM_173505, intron 3 of 9) L1MB3|LINE|L1 22845 NM_173505 147463 Hs.355689 NM_173505 ENSG00000154065 ANKRD29 - ankyrin repeat domain 29 protein-coding chr4-2919 chr4 88623191 88623401 + 13.4 0.000 intron (NM_001318505, intron 3 of 8) L2c|LINE|L2 30816 NM_001318505 8916 Hs.35804 NM_014606 ENSG00000138641 HERC3 - HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein-coding chr17-1729 chr17 76155244 76155454 + 13.4 0.000 TTS (NR_040017) TTS (NR_040017) -14104 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr8-621 chr8 135544011 135544221 + 13.4 0.000 intron (NM_006558, intron 3 of 8) intron (NM_006558, intron 3 of 8) 86660 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr17-2268 chr17 19898060 19898270 + 13.4 0.000 Intergenic Intergenic -30229 NM_014683 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr5-1210 chr5 112420341 112420551 + 13.4 0.000 non-coding (NR_027706, exon 1 of 1) non-coding (NR_027706, exon 1 of 1) 863 NR_027706 54508 Hs.591264 NR_027706 ENSG00000278921 EPB41L4A-DT EPB41L4A-AS2 EPB41L4A divergent transcript ncRNA chr3-3044 chr3 124906072 124906282 + 13.4 0.000 3' UTR (NM_033049, exon 12 of 12) 3' UTR (NM_033049, exon 12 of 12) -4766 NM_001354764 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr4-4740 chr4 94383967 94384177 + 13.4 0.000 Intergenic HERVH-int|LTR|ERV1 -41236 NM_014485 27306 Hs.128433 NM_014485 ENSG00000163106 HPGDS GSTS|GSTS1|GSTS1-1|PGD2|PGDS hematopoietic prostaglandin D synthase protein-coding chr12-2210 chr12 43029826 43030036 + 13.4 0.000 Intergenic L2|LINE|L2 -125384 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr2-2788 chr2 12684449 12684659 + 13.4 0.000 Intergenic Intergenic -32318 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr20-1760 chr20 50009629 50009839 + 13.4 0.000 Intergenic Intergenic 26754 NM_005985 6615 Hs.48029 NM_005985 ENSG00000124216 SNAI1 SLUGH2|SNA|SNAH|SNAIL|SNAIL1|dJ710H13.1 snail family transcriptional repressor 1 protein-coding chr5-2057 chr5 132064916 132065126 + 13.4 0.000 Intergenic Intergenic 4366 NM_000588 3562 Hs.694 NM_000588 ENSG00000164399 IL3 IL-3|MCGF|MULTI-CSF interleukin 3 protein-coding chr4-2219 chr4 139976119 139976329 + 13.4 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -151791 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr7-5885 chr7 93516373 93516583 + 13.4 0.000 intron (NM_001164737, intron 2 of 15) intron (NM_001164737, intron 2 of 15) -32459 NR_030164 574442 NR_030164 ENSG00000207656 MIR489 MIRN489|hsa-mir-489|mir-489 microRNA 489 ncRNA chr3-6766 chr3 141946434 141946644 + 13.4 0.000 3' UTR (NM_001178140, exon 10 of 10) 3' UTR (NM_001178140, exon 10 of 10) 53848 NM_001178140 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr14-626 chr14 22851305 22851515 + 13.4 0.000 Intergenic Intergenic 14825 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr10-1004 chr10 100229532 100229742 + 13.4 0.000 promoter-TSS (NM_001320928) promoter-TSS (NM_001320928) -27 NM_001320928 1147 Hs.198998 NM_001278 ENSG00000213341 CHUK IKBKA|IKK-alpha|IKK1|IKKA|NFKBIKA|TCF16 component of inhibitor of nuclear factor kappa B kinase complex protein-coding chr3-867 chr3 141487628 141487838 + 13.4 0.000 intron (NM_006506, intron 1 of 23) CpG 706 NM_001303245 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr8-1138 chr8 133152966 133153176 + 13.4 0.000 Intergenic Intergenic -37968 NR_037944 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr6-2861 chr6 3789112 3789322 + 13.4 0.000 Intergenic Intergenic -37205 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr1-7082 chr1 186974864 186975074 + 13.4 0.000 intron (NM_024420, intron 15 of 17) intron (NM_024420, intron 15 of 17) -117873 NR_126347 104169671 NR_126347 ENSG00000230426 LINC01036 - long intergenic non-protein coding RNA 1036 ncRNA chr3-4333 chr3 178062310 178062520 + 13.4 0.000 Intergenic Intergenic 245550 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr20-1070 chr20 32206927 32207137 + 13.4 0.000 promoter-TSS (NM_015352) promoter-TSS (NM_015352) 711 NM_002657 5326 Hs.154104 NM_002657 ENSG00000126003 PLAGL2 ZNF900 PLAG1 like zinc finger 2 protein-coding chr20-804 chr20 19376481 19376691 + 13.4 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -91990 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr1-6643 chr1 44989753 44989963 + 13.4 0.000 Intergenic L2a|LINE|L2 -3136 NM_001261418 8891 Hs.533549 NM_020365 ENSG00000070785 EIF2B3 EIF-2B|EIF2Bgamma eukaryotic translation initiation factor 2B subunit gamma protein-coding chr2-1240 chr2 120736400 120736610 + 13.4 0.000 intron (NM_001371271, intron 1 of 13) CpG 637 NM_001371271 chr2-6419 chr2 142565908 142566118 + 13.4 0.000 Intergenic Intergenic -311651 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr19-2140 chr19 3769207 3769417 + 13.4 0.000 3' UTR (NM_032753, exon 3 of 3) 3' UTR (NM_032753, exon 3 of 3) 2916 NM_032753 84839 Hs.532691 NM_032753 ENSG00000173976 RAX2 ARMD6|CORD11|QRX|RAXL1 retina and anterior neural fold homeobox 2 protein-coding chr2-9275 chr2 221502558 221502768 + 13.4 0.000 intron (NM_001363748, intron 3 of 17) intron (NM_001363748, intron 3 of 17) 69641 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr9-2054 chr9 18474596 18474806 + 13.4 0.000 intron (NM_052866, intron 1 of 12) intron (NM_052866, intron 1 of 12) 548 NM_052866 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr8-2670 chr8 86108869 86109079 + 13.3 0.000 intron (NM_152565, intron 1 of 7) intron (NM_152565, intron 1 of 7) 10064 NM_152565 245972 Hs.436360 NM_152565 ENSG00000147614 ATP6V0D2 ATP6D2|VMA6 ATPase H+ transporting V0 subunit d2 protein-coding chr15-997 chr15 70132132 70132342 + 13.3 0.000 Intergenic Intergenic -34320 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr4-1603 chr4 39410518 39410728 + 13.3 0.000 intron (NM_175737, intron 1 of 4) intron (NM_175737, intron 1 of 4) -1287 NR_049857 100847065 NR_049857 ENSG00000264621 MIR5591 - microRNA 5591 ncRNA chr8-1738 chr8 18737944 18738154 + 13.3 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 70818 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr12-1826 chr12 13196651 13196861 + 13.3 0.000 promoter-TSS (NM_001423) promoter-TSS (NM_001423) 30 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr17-1289 chr17 18859409 18859619 + 13.3 0.000 intron (NM_001353096, intron 1 of 11) MIR|SINE|MIR 174 NM_001353096 5636 Hs.632236 NM_002767 ENSG00000141127 PRPSAP2 PAP41 phosphoribosyl pyrophosphate synthetase associated protein 2 protein-coding chr5-2807 chr5 14174081 14174291 + 13.3 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 30844 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr22-484 chr22 43143210 43143420 + 13.3 0.000 promoter-TSS (NM_173467) promoter-TSS (NM_173467) 82 NR_046423 27349 Hs.349111 NM_014507 ENSG00000100294 MCAT FASN2C|MCT|MCT1|MT|NET62|fabD malonyl-CoA-acyl carrier protein transacylase protein-coding chr7-1813 chr7 102134533 102134743 + 13.3 0.000 intron (NM_001913, intron 8 of 22) AluJb|SINE|Alu -150503 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr15-1391 chr15 39877694 39877904 + 13.3 0.000 intron (NM_001271854, intron 1 of 3) AluSz|SINE|Alu 43093 NM_007223 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr2-2874 chr2 182854594 182854804 + 13.3 0.000 intron (NM_001463, intron 2 of 5) L1MEf|LINE|L1 11938 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr1-3495 chr1 110050790 110051000 + 13.3 0.000 intron (NR_073071, intron 19 of 21) intron (NR_073071, intron 19 of 21) 16271 NM_033088 85369 Hs.584996 NM_033088 ENSG00000143093 STRIP1 FAM40A|FAR11A striatin interacting protein 1 protein-coding chr9-1595 chr9 98659006 98659216 + 13.3 0.000 intron (NM_005458, intron 1 of 18) L4_A_Mam|LINE|RTE-X 49824 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr10-3257 chr10 124906682 124906892 + 13.3 0.000 Intergenic Intergenic -35336 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr17-5959 chr17 76582671 76582881 + 13.3 0.000 intron (NM_006456, intron 1 of 8) intron (NM_006456, intron 1 of 8) 3084 NM_006456 10610 Hs.592105 NM_006456 ENSG00000070731 ST6GALNAC2 SAITL1|SIAT7|SIAT7B|SIATL1|ST6GalNAII|STHM ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein-coding chr15-2028 chr15 50096408 50096618 + 13.3 0.000 intron (NR_073597, intron 2 of 26) intron (NR_073597, intron 2 of 26) 16866 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr18-1276 chr18 59005409 59005619 + 13.3 0.000 Intergenic Intergenic -30165 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr11-1927 chr11 68505637 68505847 + 13.3 0.000 intron (NR_147971, intron 2 of 24) MER3|DNA|hAT-Charlie 44990 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr2-2971 chr2 32832278 32832488 + 13.3 0.000 intron (NR_027098, intron 1 of 5) intron (NR_027098, intron 1 of 5) 6950 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr7-1732 chr7 22998032 22998242 + 13.3 0.000 intron (NM_032581, intron 1 of 10) intron (NM_032581, intron 1 of 10) 15993 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr9-2509 chr9 108479023 108479233 + 13.3 0.000 Intergenic MamRep605|LTR?|LTR? 376858 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr7-1608 chr7 1758678 1758888 + 13.3 0.000 Intergenic ERVL-int|LTR|ERVL -16473 NR_120508 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr12-4016 chr12 38410753 38410963 + 13.3 0.000 Intergenic L2a|LINE|L2 94084 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr12-2875 chr12 18612942 18613152 + 13.3 0.000 intron (NM_001288774, intron 31 of 32) intron (NM_001288774, intron 31 of 32) 124462 NM_001330769 89869 Hs.97542 NM_033123 ENSG00000139151 PLCZ1 NYD-SP27|PLC-zeta-1|PLCzeta|SPGF17 phospholipase C zeta 1 protein-coding chrX-510 chrX 108030175 108030385 + 13.3 0.000 Intergenic Intergenic -14690 NM_001170553 340547 Hs.177164 NM_182607 ENSG00000101842 VSIG1 1700062D20Rik|GPA34|dJ889N15.1 V-set and immunoglobulin domain containing 1 protein-coding chr2-3611 chr2 101350281 101350491 + 13.3 0.000 3' UTR (NM_153836, exon 4 of 4) 3' UTR (NM_153836, exon 4 of 4) 37117 NM_153836 200407 Hs.732289 NM_153836 ENSG00000175874 CREG2 - cellular repressor of E1A stimulated genes 2 protein-coding chr8-1811 chr8 117913458 117913668 + 13.3 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 7350 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr10-2547 chr10 62594175 62594385 + 13.3 0.000 intron (NM_199452, intron 1 of 6) intron (NM_199452, intron 1 of 6) 73832 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr2-3018 chr2 58483991 58484201 + 13.3 0.000 Intergenic Intergenic -36657 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr2-3587 chr2 54838581 54838791 + 13.3 0.000 intron (NM_001039753, intron 6 of 40) intron (NM_001039753, intron 6 of 40) 113674 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr20-729 chr20 2740498 2740708 + 13.3 0.000 intron (NM_001110514, intron 7 of 17) intron (NM_001110514, intron 7 of 17) 47725 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr2-4861 chr2 99813307 99813517 + 13.3 0.000 intron (NM_001025108, intron 7 of 23) intron (NM_001025108, intron 7 of 23) 292171 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr9-1655 chr9 15999808 16000018 + 13.3 0.000 Intergenic MamGypLTR2c|LTR|Gypsy 253194 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr1-10446 chr1 160114724 160114934 + 13.3 0.000 promoter-TSS (NM_000702) promoter-TSS (NM_000702) -930 NM_000702 477 Hs.34114 NM_000702 ENSG00000018625 ATP1A2 FHM2|MHP2 ATPase Na+/K+ transporting subunit alpha 2 protein-coding chr11-2506 chr11 67725782 67725992 + 13.3 0.000 Intergenic SATR1|Satellite|Satellite -44663 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr5-3361 chr5 138015021 138015231 + 13.3 0.000 intron (NM_001101801, intron 3 of 21) MER20|DNA|hAT-Charlie -17648 NR_037900 100130172 Hs.616629 NR_037900 LOC100130172 - uncharacterized LOC100130172 ncRNA chr7-1772 chr7 67129232 67129442 + 13.3 0.000 intron (NR_134540, intron 12 of 14) L1MC1|LINE|L1 -14940 NR_039793 100616310 NR_039793 ENSG00000266525 MIR4650-1 - microRNA 4650-1 ncRNA chr2-1573 chr2 42169361 42169571 + 13.3 0.000 5' UTR (NM_019063, exon 1 of 23) 5' UTR (NM_019063, exon 1 of 23) 113 NM_001145076 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr4-2762 chr4 14113207 14113417 + 13.3 0.000 intron (NR_033931, intron 1 of 2) intron (NR_033931, intron 1 of 2) 1344 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr5-1268 chr5 122500695 122500905 + 13.3 0.000 Intergenic Intergenic -21713 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA chr1-5042 chr1 86965288 86965498 + 13.3 0.000 intron (NM_012262, intron 1 of 6) intron (NM_012262, intron 1 of 6) 50758 NM_001134492 9653 Hs.743280 NM_012262 ENSG00000153936 HS2ST1 dJ604K5.2 heparan sulfate 2-O-sulfotransferase 1 protein-coding chr3-1210 chr3 52046495 52046705 + 13.3 0.000 Intergenic Intergenic 9971 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr8-2160 chr8 42513785 42513995 + 13.3 0.000 intron (NM_006749, intron 1 of 10) L2c|LINE|L2 -12659 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr18-813 chr18 2972149 2972359 + 13.3 0.000 intron (NM_014646, intron 1 of 19) intron (NM_014646, intron 1 of 19) -25631 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo chr9-1907 chr9 133584985 133585195 + 13.3 0.000 Intergenic Intergenic -4844 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr6-1588 chr6 26103973 26104183 + 13.3 0.000 exon (NM_003542, exon 1 of 1) exon (NM_003542, exon 1 of 1) 130 NM_003542 8364 Hs.46423 NM_003542 ENSG00000197061 HIST1H4C H4/g|H4FG|dJ221C16.1 histone cluster 1 H4 family member c protein-coding chr1-3983 chr1 156241425 156241635 + 13.3 0.000 promoter-TSS (NM_199173) promoter-TSS (NM_199173) -654 NM_199173 632 Hs.654541 NM_199173 ENSG00000242252 BGLAP BGP|OC|OCN bone gamma-carboxyglutamate protein protein-coding chr17-2306 chr17 43084887 43085097 + 13.3 0.000 intron (NR_027676, intron 11 of 22) intron (NR_027676, intron 11 of 22) 39123 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr16-1688 chr16 89450006 89450216 + 13.3 0.000 intron (NR_110931, intron 2 of 2) intron (NR_110931, intron 2 of 2) 19193 NR_110932 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chrX-793 chrX 52422963 52423173 + 13.3 0.000 Intergenic Intergenic 54047 NM_130777 9502 Hs.409726 NM_130777 ENSG00000155622 XAGE2 CT12.2|GAGED3|XAGE-2|XAGE2B X antigen family member 2 protein-coding chr6-2287 chr6 85108622 85108832 + 13.3 0.000 Intergenic Intergenic 281459 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr15-713 chr15 41520792 41521002 + 13.3 0.000 exon (NM_015540, exon 22 of 25) exon (NM_015540, exon 22 of 25) -7070 NM_002344 4058 Hs.434481 NM_002344 ENSG00000062524 LTK TYK1 leukocyte receptor tyrosine kinase protein-coding chr6-3087 chr6 83519304 83519514 + 13.3 0.000 intron (NM_153362, intron 1 of 1) intron (NM_153362, intron 1 of 1) 6875 NM_001170423 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr4-895 chr4 10611863 10612073 + 13.3 0.000 intron (NM_052964, intron 2 of 18) intron (NM_052964, intron 2 of 18) 72800 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr6-706 chr6 45377916 45378126 + 13.3 0.000 promoter-TSS (NR_146633) promoter-TSS (NR_146633) -87 NM_181356 8464 Hs.368325 NM_003599 ENSG00000196284 SUPT3H SPT3|SPT3L SPT3 homolog, SAGA and STAGA complex component protein-coding chr21-254 chr21 25573906 25574116 + 13.3 0.000 promoter-TSS (NR_030784) promoter-TSS (NR_030784) 31 NR_030784 406947 NR_030784 ENSG00000283904 MIR155 MIRN155|miRNA155|mir-155 microRNA 155 ncRNA chr10-793 chr10 102128081 102128291 + 13.3 0.000 Intergenic AluSc5|SINE|Alu -4808 NM_001288727 23082 Hs.533551 NM_015062 ENSG00000148840 PPRC1 PRC PPARG related coactivator 1 protein-coding chr1-2564 chr1 21534760 21534970 + 13.3 0.000 intron (NM_001177520, intron 1 of 9) MIRb|SINE|MIR -16405 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr4-866 chr4 112232301 112232511 + 13.3 0.000 intron (NM_018569, intron 1 of 9) CpG 619 NM_018569 55435 Hs.435991 NM_018569 ENSG00000138660 AP1AR 2C18|C4orf16|GBAR|PRO0971|gamma-BAR adaptor related protein complex 1 associated regulatory protein protein-coding chr4-2566 chr4 92156915 92157125 + 13.3 0.000 Intergenic L1MA8|LINE|L1 120282 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr19-1279 chr19 35267767 35267977 + 13.3 0.000 TTS (NM_001260489) TTS (NM_001260489) -1090 NM_003367 7392 Hs.454534 NM_003367 ENSG00000105698 USF2 FIP|bHLHb12 upstream transcription factor 2, c-fos interacting protein-coding chr18-310 chr18 55250973 55251183 + 13.3 0.000 intron (NM_001348216, intron 8 of 12) L2c|LINE|L2 51582 NM_001243236 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr19-2960 chr19 11130967 11131177 + 13.3 0.000 intron (NM_001195798, intron 17 of 17) L2a|LINE|L2 17598 NR_106946 102465534 NR_106946 ENSG00000284553 MIR6886 hsa-mir-6886 microRNA 6886 ncRNA chr7-1568 chr7 73999728 73999938 + 13.3 0.000 Intergenic Intergenic -27956 NM_001278918 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr6-1669 chr6 3521246 3521456 + 13.3 0.000 Intergenic Intergenic -64792 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr15-1417 chr15 56468525 56468735 + 13.3 0.000 Intergenic Intergenic -3493 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr8-1321 chr8 18609934 18610144 + 13.3 0.000 intron (NM_015310, intron 11 of 15) intron (NM_015310, intron 11 of 15) 198828 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr3-6035 chr3 49707296 49707506 + 13.3 0.000 intron (NM_022064, intron 26 of 38) L2b|LINE|L2 12283 NM_198722 386724 Hs.567903 NM_198722 ENSG00000176020 AMIGO3 ALI3|AMIGO-3 adhesion molecule with Ig like domain 3 protein-coding chr13-1851 chr13 110723083 110723293 + 13.3 0.000 3' UTR (NM_198219, exon 2 of 2) 3' UTR (NM_198219, exon 2 of 2) 7751 NM_001267728 3621 Hs.46700 NM_005537 ENSG00000153487 ING1 p24ING1c|p33|p33ING1|p33ING1b|p47|p47ING1a inhibitor of growth family member 1 protein-coding chr7-1885 chr7 111683070 111683280 + 13.3 0.000 Intergenic MER44B|DNA|TcMar-Tigger -120658 NM_001244606 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr2-3649 chr2 158664272 158664482 + 13.3 0.000 intron (NM_001005476, intron 15 of 20) intron (NM_001005476, intron 15 of 20) 70625 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr14-1216 chr14 89330245 89330455 + 13.3 0.000 intron (NM_001085471, intron 3 of 6) intron (NM_001085471, intron 3 of 6) 86883 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr1-4794 chr1 18448167 18448377 + 13.3 0.000 Intergenic MIRb|SINE|MIR -32658 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr4-1111 chr4 38150832 38151042 + 13.3 0.000 Intergenic Intergenic 30983 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr1-6342 chr1 6050377 6050587 + 13.3 0.000 intron (NM_001199863, intron 1 of 13) intron (NM_001199863, intron 1 of 13) 4594 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr9-1713 chr9 107504759 107504969 + 13.3 0.000 Intergenic Intergenic -15095 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr18-831 chr18 10422013 10422223 + 13.3 0.000 Intergenic MIRc|SINE|MIR -7748 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr6-1435 chr6 154302134 154302344 + 13.3 0.000 intron (NM_015553, intron 1 of 11) intron (NM_015553, intron 1 of 11) 27842 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr15-1164 chr15 80495642 80495852 + 13.3 0.000 intron (NM_014862, intron 5 of 18) intron (NM_014862, intron 5 of 18) 67197 NR_120363 101929586 Hs.569426 NR_120363 ENSG00000259175 LOC101929586 - uncharacterized LOC101929586 ncRNA chr10-3158 chr10 75522955 75523165 + 13.3 0.000 intron (NM_001305581, intron 2 of 6) MIRc|SINE|MIR -29398 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA chr18-848 chr18 23812636 23812846 + 13.3 0.000 intron (NM_001127717, intron 13 of 73) intron (NM_001127717, intron 13 of 73) -60279 NM_001127718 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr11-4912 chr11 63320420 63320630 + 13.3 0.000 Intergenic L1PA8|LINE|L1 30622 NM_001039752 387775 Hs.188982 NM_001039752 ENSG00000184999 SLC22A10 OAT5|hOAT5 solute carrier family 22 member 10 protein-coding chr8-672 chr8 67064058 67064268 + 13.3 0.000 promoter-TSS (NM_001363131) promoter-TSS (NM_001363131) -205 NM_024790 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr2-4279 chr2 231494780 231494990 + 13.3 0.000 Intergenic Charlie8|DNA|hAT-Charlie 19454 NR_024079 151477 Hs.375211 NM_173513 ENSG00000181798 LINC00471 C2orf52 long intergenic non-protein coding RNA 471 ncRNA chr5-1206 chr5 102760912 102761122 + 13.3 0.000 intron (NR_157231, intron 1 of 14) MamRTE1|LINE|RTE-BovB 5712 NM_001364590 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr19-1993 chr19 10830034 10830244 + 13.3 0.000 exon (NM_004945, exon 19 of 20) exon (NM_004945, exon 19 of 20) 1166 NR_106851 102466737 NR_106851 ENSG00000275640 MIR6793 hsa-mir-6793 microRNA 6793 ncRNA chr3-2177 chr3 187025751 187025961 + 13.3 0.000 intron (NM_003032, intron 1 of 6) intron (NM_003032, intron 1 of 6) 4001 NM_003032 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr3-2231 chr3 42036544 42036754 + 13.3 0.000 Intergenic Intergenic -50551 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr14-347 chr14 64972060 64972270 + 13.3 0.000 5' UTR (NM_198686, exon 1 of 7) 5' UTR (NM_198686, exon 1 of 7) 171 NM_001308154 376267 Hs.512492 NM_198686 ENSG00000139998 RAB15 - RAB15, member RAS oncogene family protein-coding chr14-2145 chr14 84482349 84482559 + 13.3 0.000 Intergenic Intergenic -789478 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr9-2323 chr9 13722027 13722237 + 13.3 0.000 Intergenic L1M5|LINE|L1 -205839 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr3-1338 chr3 113838771 113838981 + 13.3 0.000 promoter-TSS (NM_017577) promoter-TSS (NM_017577) 88 NM_017577 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr16-1384 chr16 70697802 70698012 + 13.3 0.000 intron (NM_001351157, intron 14 of 17) intron (NM_001351157, intron 14 of 17) -11854 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr2-2731 chr2 120298234 120298444 + 13.3 0.000 Intergenic HAL1ME|LINE|L1 45487 NM_001369400 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr17-1876 chr17 43734179 43734389 + 13.3 0.000 Intergenic Intergenic 24507 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chrX-523 chrX 45344648 45344858 + 13.3 0.000 Intergenic Charlie16a|DNA|hAT-Charlie -143877 NM_024689 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chrX-1304 chrX 120457849 120458059 + 13.3 0.000 intron (NM_013995, intron 1 of 8) intron (NM_013995, intron 1 of 8) 11395 NM_013995 3920 Hs.496684 NM_002294 ENSG00000005893 LAMP2 CD107b|LAMP-2|LAMPB|LGP-96|LGP110 lysosomal associated membrane protein 2 protein-coding chr4-2208 chr4 136713198 136713408 + 13.3 0.000 Intergenic Intergenic -480453 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr18-289 chr18 57768614 57768824 + 13.3 0.000 intron (NM_005603, intron 1 of 27) intron (NM_005603, intron 1 of 27) 34596 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr5-2510 chr5 155087107 155087317 + 13.3 0.000 Intergenic Intergenic 73457 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr6-1995 chr6 15062665 15062875 + 13.3 0.000 Intergenic MER46C|DNA|TcMar-Tigger -183299 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr4-2633 chr4 153143082 153143292 + 13.3 0.000 Intergenic Intergenic -9147 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr1-1448 chr1 229271143 229271353 + 13.3 0.000 promoter-TSS (NR_149312) promoter-TSS (NR_149312) -94 NR_149312 105373159 NR_149312 LOC105373159 - uncharacterized LOC105373159 ncRNA chr3-1491 chr3 117788150 117788360 + 13.3 0.000 Intergenic Intergenic -97330 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr2-2818 chr2 65573249 65573459 + 13.3 0.000 Intergenic MER5B|DNA|hAT-Charlie -140755 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2-2441 chr2 56522857 56523067 + 13.3 0.000 Intergenic Intergenic -337192 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr14-1174 chr14 54617543 54617753 + 13.3 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 50036 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr5-1377 chr5 95730984 95731194 + 13.3 0.000 promoter-TSS (NM_014899) promoter-TSS (NM_014899) -247 NM_014899 22836 Hs.445030 NM_014899 ENSG00000164292 RHOBTB3 - Rho related BTB domain containing 3 protein-coding chr6-2088 chr6 151241414 151241624 + 13.3 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 1552 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr17-4013 chr17 75426357 75426567 + 13.3 0.000 Intergenic Intergenic 20393 NR_037449 100500841 NR_037449 ENSG00000264511 MIR3678 mir-3678 microRNA 3678 ncRNA chr14-1209 chr14 75868527 75868737 + 13.3 0.000 intron (NM_015072, intron 29 of 31) intron (NM_015072, intron 29 of 31) 113363 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr4-3285 chr4 140097162 140097372 + 13.3 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -30748 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr7-4461 chr7 131931381 131931591 + 13.3 0.000 intron (NR_110836, intron 4 of 5) intron (NR_110836, intron 4 of 5) 21266 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chrX-615 chrX 8988655 8988865 + 13.3 0.000 Intergenic L1P4c|LINE|L1 45367 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding chr20-745 chr20 17543054 17543264 + 13.3 0.000 intron (NM_001278606, intron 1 of 8) intron (NM_001278606, intron 1 of 8) -11780 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr10-2035 chr10 79134367 79134577 + 13.3 0.000 intron (NM_020338, intron 2 of 24) intron (NM_020338, intron 2 of 24) 65506 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr3-975 chr3 141331816 141332026 + 13.3 0.000 intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) 7735 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr11-1862 chr11 115614029 115614239 + 13.3 0.000 Intergenic (TGAGGC)n|Simple_repeat|Simple_repeat -109719 NM_014333 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr5-2376 chr5 84494558 84494768 + 13.3 0.000 Intergenic Intergenic -109783 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr17-995 chr17 61409733 61409943 + 13.3 0.000 TTS (NM_005994) TTS (NM_005994) -1913 NR_160788 388407 Hs.434459 NM_203425 C17orf82 - chromosome 17 open reading frame 82 ncRNA chr10-1710 chr10 62422163 62422373 + 13.3 0.000 intron (NM_199451, intron 3 of 7) ERVL-E-int|LTR|ERVL -47141 NR_104162 283045 NR_104162 LOC283045 - uncharacterized LOC283045 ncRNA chr20-3300 chr20 11179009 11179219 + 13.3 0.000 Intergenic Intergenic 94269 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr11-2441 chr11 33997871 33998081 + 13.3 0.000 Intergenic Intergenic -53755 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr1-7805 chr1 53186043 53186253 + 13.3 0.000 Intergenic LTR13_|LTR|ERVK -10676 NM_000098 1376 Hs.713535 NM_000098 ENSG00000157184 CPT2 CPT1|CPTASE|IIAE4 carnitine palmitoyltransferase 2 protein-coding chr1-2410 chr1 232904750 232904960 + 13.3 0.000 Intergenic LTR38|LTR|ERV1 -45756 NR_138025 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr10-2809 chr10 771486 771696 + 13.3 0.000 Intergenic L1MC5a|LINE|L1 -81923 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr14-2046 chr14 64865963 64866173 + 13.3 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) 13839 NM_001355437 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr7-4786 chr7 80721955 80722165 + 13.3 0.000 Intergenic Intergenic 75407 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr19-1222 chr19 10086156 10086366 + 13.3 0.000 promoter-TSS (NM_018381) promoter-TSS (NM_018381) -56 NM_001308277 55337 Hs.655613 NM_018381 ENSG00000130813 SHFL C19orf66|IRAV|RyDEN|SFL shiftless antiviral inhibitor of ribosomal frameshifting protein-coding chr12-2812 chr12 113850956 113851166 + 13.3 0.000 intron (NM_001146698, intron 22 of 24) intron (NM_001146698, intron 22 of 24) -77378 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr3-3676 chr3 148513283 148513493 + 13.3 0.000 Intergenic Intergenic -184483 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr9-3502 chr9 21682404 21682614 + 13.3 0.000 Intergenic Intergenic -120127 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr10-531 chr10 32056461 32056671 + 13.3 0.000 promoter-TSS (NM_004521) promoter-TSS (NM_004521) -141 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr16-1293 chr16 85104127 85104337 + 13.3 0.000 intron (NM_001366920, intron 5 of 7) intron (NM_001366920, intron 5 of 7) 8240 NM_198491 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr19-1348 chr19 34318803 34319013 + 13.3 0.000 intron (NM_014686, intron 2 of 13) AluSx|SINE|Alu -45832 NM_001289789 2821 Hs.466471 NM_000175 ENSG00000105220 GPI AMF|GNPI|NLK|PGI|PHI|SA-36|SA36 glucose-6-phosphate isomerase protein-coding chr1-5465 chr1 84303244 84303454 + 13.3 0.000 intron (NM_001134663, intron 2 of 3) intron (NM_001134663, intron 2 of 3) 698 NM_001134664 148418 Hs.591445 NM_001010971 ENSG00000203943 SAMD13 HSD-41|HSD-42 sterile alpha motif domain containing 13 protein-coding chr17-2915 chr17 44272822 44273032 + 13.3 0.000 Intergenic Intergenic -4792 NM_000342 6521 Hs.210751 NM_000342 ENSG00000004939 SLC4A1 AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR solute carrier family 4 member 1 (Diego blood group) protein-coding chr10-1839 chr10 35409288 35409498 + 13.3 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 72519 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr7-2541 chr7 74401151 74401361 + 13.3 0.000 intron (NM_032421, intron 14 of 15) intron (NM_032421, intron 14 of 15) -52650 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr11-2012 chr11 61004780 61004990 + 13.3 0.000 intron (NM_001254751, intron 1 of 10) intron (NM_001254751, intron 1 of 10) 33205 NM_001254751 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr15-3311 chr15 79059499 79059709 + 13.3 0.000 intron (NM_001145648, intron 2 of 26) intron (NM_001145648, intron 2 of 26) 31176 NM_002891 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr8-1918 chr8 38412047 38412257 + 13.3 0.000 3' UTR (NM_023110, exon 18 of 18) 3' UTR (NM_023110, exon 18 of 18) 25021 NM_001199660 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 SLC55A2 leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr9-2063 chr9 35680127 35680337 + 13.3 0.000 intron (NM_001216, intron 9 of 10) intron (NM_001216, intron 9 of 10) 6304 NM_001216 768 Hs.63287 NM_001216 ENSG00000107159 CA9 CAIX|MN carbonic anhydrase 9 protein-coding chr5-1690 chr5 81050312 81050522 + 13.3 0.000 intron (NM_006909, intron 2 of 26) intron (NM_006909, intron 2 of 26) -89510 NR_105015 102524628 Hs.737159 NR_105015 ENSG00000251450 RASGRF2-AS1 - RASGRF2 antisense RNA 1 ncRNA chr5-1556 chr5 78595045 78595255 + 13.3 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 53622 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr6-2337 chr6 121677625 121677835 + 13.3 0.000 Intergenic Intergenic 242084 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr4-2331 chr4 154506546 154506756 + 13.3 0.000 Intergenic Intergenic -14852 NM_001142552 54798 Hs.655664 NM_017639 ENSG00000197410 DCHS2 CDH27|CDHJ|CDHR7|PCDH23|PCDHJ dachsous cadherin-related 2 protein-coding chr17-2925 chr17 47802484 47802694 + 13.3 0.000 Intergenic Intergenic 19205 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding chrX-251 chrX 129905926 129906136 + 13.3 0.000 promoter-TSS (NM_006649) promoter-TSS (NM_006649) -90 NM_001166221 10813 Hs.458598 NM_006649 ENSG00000156697 UTP14A NYCO16|SDCCAG16|Utp14|dJ537K23.3 UTP14A small subunit processome component protein-coding chr7-1756 chr7 47361617 47361827 + 13.3 0.000 intron (NM_022748, intron 17 of 30) intron (NM_022748, intron 17 of 30) 103081 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr2-3601 chr2 79910731 79910941 + 13.3 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -44253 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr13-562 chr13 29919089 29919299 + 13.3 0.000 intron (NR_047501, intron 1 of 1) intron (NR_047501, intron 1 of 1) 7457 NR_047501 100861573 Hs.585619 NR_047501 ENSG00000224405 LINC00572 - long intergenic non-protein coding RNA 572 ncRNA chr5-1157 chr5 172800220 172800430 + 13.3 0.000 Intergenic Intergenic -29130 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr3-2450 chr3 49924804 49925014 + 13.3 0.000 intron (NM_001142501, intron 1 of 4) MLT1F|LTR|ERVL-MaLR 5103 NM_001142501 84315 Hs.655014 NM_032355 ENSG00000164077 MON1A SAND1 MON1 homolog A, secretory trafficking associated protein-coding chr8-1419 chr8 88270018 88270228 + 13.3 0.000 intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 57360 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr17-861 chr17 65553599 65553809 + 13.3 0.000 intron (NM_001363813, intron 2 of 9) intron (NM_001363813, intron 2 of 9) 7944 NM_001363813 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr13-886 chr13 37014722 37014932 + 13.3 0.000 intron (NM_001014286, intron 23 of 25) L1MC4|LINE|L1 14041 NM_181503 11340 Hs.294041 NM_181503 ENSG00000120699 EXOSC8 CIP3|EAP2|OIP2|PCH1C|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding chr2-2413 chr2 29115249 29115459 + 13.3 0.000 promoter-TSS (NM_001287527) promoter-TSS (NM_001287527) -61 NM_024692 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr11-698 chr11 62880435 62880645 + 13.3 0.000 promoter-TSS (NM_001013251) promoter-TSS (NM_001013251) -356 NM_001013251 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr6-1780 chr6 90298952 90299162 + 13.3 0.000 Intergenic Intergenic -2149 NM_001170794 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr12-2485 chr12 74021956 74022166 + 13.3 0.000 Intergenic Intergenic 270570 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr11-2054 chr11 69062424 69062634 + 13.3 0.000 intron (NM_139075, intron 5 of 24) intron (NM_139075, intron 5 of 24) 13597 NM_139075 219931 Hs.131851 NM_139075 ENSG00000162341 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding chr1-2738 chr1 25253948 25254158 + 13.3 0.000 intron (NR_135788, intron 1 of 3) intron (NR_135788, intron 1 of 3) -6534 NR_135780 57035 Hs.259412 NM_020317 ENSG00000117616 RSRP1 C1orf63|NPD014 arginine and serine rich protein 1 protein-coding chr19-947 chr19 50376689 50376899 + 13.3 0.000 5' UTR (NM_001256647, exon 2 of 9) 5' UTR (NM_001256647, exon 2 of 9) 337 NM_001256647 7376 Hs.432976 NM_007121 ENSG00000131408 NR1H2 LXR-b|LXRB|NER|NER-I|RIP15|UNR nuclear receptor subfamily 1 group H member 2 protein-coding chr1-4044 chr1 202805776 202805986 + 13.3 0.000 intron (NM_001314042, intron 1 of 27) intron (NM_001314042, intron 1 of 27) 3589 NM_001314042 10765 Hs.18891 NM_006618 ENSG00000117139 KDM5B CT31|JARID1B|MRT65|PLU-1|PLU1|PPP1R98|PUT1|RBBP2H1A|RBP2-H1 lysine demethylase 5B protein-coding chr5-2548 chr5 174723949 174724159 + 13.3 0.000 promoter-TSS (NM_001363626) promoter-TSS (NM_001363626) -528 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr4-2085 chr4 30757419 30757629 + 13.3 0.000 intron (NM_032457, intron 1 of 2) L2b|LINE|L2 37155 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr19-1303 chr19 6271809 6272019 + 13.3 0.000 intron (NM_005934, intron 1 of 11) intron (NM_005934, intron 1 of 11) 8061 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr3-5246 chr3 106327299 106327509 + 13.3 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -458003 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr10-513 chr10 92975514 92975724 + 13.3 0.000 intron (NM_001319195, intron 18 of 21) SVA_D|Retroposon|SVA -85179 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr16-3235 chr16 85931607 85931817 + 13.3 0.000 Intergenic Intergenic 13365 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr12-1843 chr12 32120379 32120589 + 13.3 0.000 intron (NR_148725, intron 1 of 9) intron (NR_148725, intron 1 of 9) 13637 NM_001354189 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr9-4609 chr9 106156587 106156797 + 13.3 0.000 Intergenic L3|LINE|CR1 -444236 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr1-2466 chr1 79079860 79080070 + 13.3 0.000 Intergenic Intergenic -73235 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr8-1225 chr8 116740333 116740543 + 13.3 0.000 intron (NM_003756, intron 1 of 7) intron (NM_003756, intron 1 of 7) 15385 NM_003756 8667 Hs.492599 NM_003756 ENSG00000147677 EIF3H EIF3S3|eIF3-gamma|eIF3-p40 eukaryotic translation initiation factor 3 subunit H protein-coding chr11-792 chr11 64351281 64351491 + 13.3 0.000 intron (NM_032251, intron 17 of 26) intron (NM_032251, intron 17 of 26) -7776 NM_003942 8986 Hs.105584 NM_003942 ENSG00000162302 RPS6KA4 MSK2|RSK-B|S6K-alpha-4 ribosomal protein S6 kinase A4 protein-coding chr11-3266 chr11 75394945 75395155 + 13.3 0.000 Intergenic Charlie13a|DNA|hAT-Charlie -4441 NM_001260507 6188 Hs.546286 NM_001005 ENSG00000149273 RPS3 S3 ribosomal protein S3 protein-coding chr6-3176 chr6 125989593 125989803 + 13.3 0.000 intron (NM_001350583, intron 1 of 12) intron (NM_001350583, intron 1 of 12) 3158 NR_146804 60487 Hs.404186 NM_021820 ENSG00000066651 TRMT11 C6orf75|MDS024|TRM11|TRMT11-1 tRNA methyltransferase 11 homolog protein-coding chr11-1166 chr11 47186456 47186666 + 13.3 0.000 promoter-TSS (NM_001184974) promoter-TSS (NM_001184974) -127 NM_016223 29763 Hs.334639 NM_016223 ENSG00000165912 PACSIN3 SDPIII protein kinase C and casein kinase substrate in neurons 3 protein-coding chr2-1976 chr2 26829052 26829262 + 13.3 0.000 Intergenic Intergenic -18975 NM_020134 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr18-1347 chr18 80256839 80257049 + 13.3 0.000 Intergenic AluSz|SINE|Alu -9430 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr2-3212 chr2 220078502 220078712 + 13.3 0.000 Intergenic Intergenic -172042 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr3-1641 chr3 113249184 113249394 + 13.3 0.000 intron (NM_001301861, intron 2 of 19) intron (NM_001301861, intron 2 of 19) 37173 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr18-431 chr18 24232942 24233152 + 13.3 0.000 intron (NM_001242508, intron 4 of 15) intron (NM_001242508, intron 4 of 15) 39185 NM_018030 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr3-2030 chr3 101381954 101382164 + 13.3 0.000 intron (NM_001282803, intron 3 of 20) intron (NM_001282803, intron 3 of 20) -61484 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr16-1309 chr16 88443012 88443222 + 13.3 0.000 Intergenic Intergenic -10163 NM_153813 161882 Hs.632218 NM_153813 ENSG00000179588 ZFPM1 FOG|FOG1|ZC2HC11A|ZNF408|ZNF89A zinc finger protein, FOG family member 1 protein-coding chr10-5086 chr10 45079843 45080053 + 13.3 0.000 Intergenic MER74B|LTR|ERVL 74648 NR_024472 100133308 Hs.434365 NR_024472 RSU1P2 - Ras suppressor protein 1 pseudogene 2 pseudo chr8-311 chr8 125429928 125430138 + 13.3 0.000 promoter-TSS (NM_025195) promoter-TSS (NM_025195) -325 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr11-1687 chr11 64555006 64555216 + 13.3 0.000 promoter-TSS (NM_018484) promoter-TSS (NM_018484) -830 NM_018484 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr11-2119 chr11 134120244 134120454 + 13.3 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 31014 NR_145790 109623486 NR_145790 SNORD153 - small nucleolar RNA, C/D box 153 snoRNA chr22-825 chr22 27241879 27242089 + 13.3 0.000 Intergenic Intergenic -17305 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr19-1259 chr19 3937913 3938123 + 13.3 0.000 intron (NM_170678, intron 4 of 7) intron (NM_170678, intron 4 of 7) 4915 NM_170678 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr10-2087 chr10 112202631 112202841 + 13.3 0.000 Intergenic Intergenic -18971 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr1-6481 chr1 21452194 21452404 + 13.3 0.000 intron (NM_001256417, intron 2 of 13) intron (NM_001256417, intron 2 of 13) 12162 NM_001256416 84224 Hs.325422 NM_032264 ENSG00000142794 NBPF3 AE2 NBPF member 3 protein-coding chr1-1749 chr1 205321614 205321824 + 13.3 0.000 promoter-TSS (NM_030952) promoter-TSS (NM_030952) 26 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr14-1432 chr14 74388280 74388490 + 13.3 0.000 Intergenic L1MB5|LINE|L1 37825 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr1-3086 chr1 27968792 27969002 + 13.3 0.000 TTS (NM_018053) TTS (NM_018053) 9435 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr16-2283 chr16 3590440 3590650 + 13.3 0.000 exon (NM_032444, exon 12 of 15) exon (NM_032444, exon 12 of 15) -13142 NM_178844 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chr15-673 chr15 78008083 78008293 + 13.3 0.000 intron (NM_144572, intron 10 of 12) intron (NM_144572, intron 10 of 12) -13963 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr1-5268 chr1 205162397 205162607 + 13.3 0.000 intron (NM_199462, intron 5 of 11) intron (NM_199462, intron 5 of 11) -40524 NM_005057 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr1-5723 chr1 85028134 85028344 + 13.3 0.000 intron (NM_018298, intron 7 of 12) intron (NM_018298, intron 7 of 12) 20261 NM_018298 55283 Hs.535239 NM_018298 ENSG00000055732 MCOLN3 TRP-ML3|TRPML3 mucolipin 3 protein-coding chr1-3837 chr1 26940529 26940739 + 13.3 0.000 intron (NM_006600, intron 2 of 8) intron (NM_006600, intron 2 of 8) 18891 NM_006600 10726 Hs.263812 NM_006600 ENSG00000090273 NUDC HNUDC|MNUDC|NPD011 nuclear distribution C, dynein complex regulator protein-coding chrX-538 chrX 115058428 115058638 + 13.3 0.000 Intergenic Intergenic -40917 NM_000640 3598 Hs.336046 NM_000640 ENSG00000123496 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor subunit alpha 2 protein-coding chr10-1799 chr10 100504262 100504472 + 13.3 0.000 intron (NM_015490, intron 10 of 25) L2c|LINE|L2 15494 NM_015490 25956 Hs.18889 NM_015490 ENSG00000075826 SEC31B SEC31B-1|SEC31L2 SEC31 homolog B, COPII coat complex component protein-coding chr20-680 chr20 51372312 51372522 + 13.3 0.000 Intergenic Intergenic 80560 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr13-1078 chr13 51125836 51126046 + 13.3 0.000 intron (NR_102431, intron 1 of 4) intron (NR_102431, intron 1 of 4) -14713 NM_001351589 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr20-782 chr20 50338869 50339079 + 13.3 0.000 Intergenic Intergenic -17632 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr18-1229 chr18 45328850 45329060 + 13.3 0.000 intron (NM_001371319, intron 4 of 23) intron (NM_001371319, intron 4 of 23) 115960 NM_001242692 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr6-1690 chr6 15256949 15257159 + 13.3 0.000 intron (NM_001267040, intron 1 of 17) MIR3|SINE|MIR 8199 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr4-4311 chr4 28908554 28908764 + 13.3 0.000 Intergenic Intergenic -88125 NR_146499 102723764 NR_146499 LINC02364 - long intergenic non-protein coding RNA 2364 ncRNA chr17-1479 chr17 81884552 81884762 + 13.3 0.000 Intergenic Intergenic -6133 NM_001289414 51529 Hs.534456 NM_016476 ENSG00000141552 ANAPC11 APC11|Apc11p|HSPC214 anaphase promoting complex subunit 11 protein-coding chr17-1572 chr17 32497632 32497842 + 13.3 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 10744 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr21-450 chr21 44742031 44742241 + 13.3 0.000 Intergenic MER61-int|LTR|ERV1 -30564 NM_001272037 54084 Hs.660703 NM_144991 ENSG00000175894 TSPEAR C21orf29|DFNB98|ECTD14|TSP-EAR thrombospondin type laminin G domain and EAR repeats protein-coding chr7-1980 chr7 155316399 155316609 + 13.3 0.000 Intergenic Intergenic 18626 NM_005542 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr11-4644 chr11 33812052 33812262 + 13.3 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger 37458 NR_120550 101928440 Hs.202343 NR_120550 ENSG00000254508 FBXO3-DT FBXO3-AS1 FBXO3 divergent transcript ncRNA chr4-3658 chr4 26780621 26780831 + 13.3 0.000 Intergenic Intergenic 79518 NR_134675 105374546 Hs.548859 NR_134673 STIM2-AS1 - STIM2 antisense RNA 1 ncRNA chr1-10662 chr1 183604244 183604454 + 13.3 0.000 Intergenic Intergenic -13435 NM_001127651 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr16-801 chr16 89966006 89966216 + 13.3 0.000 3' UTR (NM_001242819, exon 12 of 12) 3' UTR (NM_001242819, exon 12 of 12) -6469 NR_003228 172 Hs.534773 NM_001132 ENSG00000223959 AFG3L1P AFG3|AFG3L1 AFG3 like matrix AAA peptidase subunit 1, pseudogene pseudo chr7-2991 chr7 23106507 23106717 + 13.3 0.000 promoter-TSS (NM_018846) promoter-TSS (NM_018846) -49 NM_018846 55975 Hs.654817 NM_018846 ENSG00000122550 KLHL7 CISS3|KLHL6|SBBI26 kelch like family member 7 protein-coding chr8-2087 chr8 132095599 132095809 + 13.3 0.000 exon (NM_001145095, exon 5 of 16) exon (NM_001145095, exon 5 of 16) 9561 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr1-5137 chr1 155598516 155598726 + 13.3 0.000 Intergenic AluSz|SINE|Alu -11549 NM_018116 55154 Hs.656547 NM_018116 ENSG00000125459 MSTO1 LST005|MMYAT|MST misato mitochondrial distribution and morphology regulator 1 protein-coding chr1-2682 chr1 201721743 201721953 + 13.3 0.000 intron (NM_020443, intron 3 of 29) intron (NM_020443, intron 3 of 29) 2340 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chr5-2246 chr5 14220659 14220869 + 13.3 0.000 intron (NM_007118, intron 1 of 56) Tigger1|DNA|TcMar-Tigger 77422 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr14-1979 chr14 44895795 44896005 + 13.3 0.000 Intergenic Intergenic -1375 NM_001017923 122525 Hs.82098 NM_001017923 ENSG00000179476 C14orf28 DRIP-1|DRIP1|c14_5270 chromosome 14 open reading frame 28 protein-coding chr15-1652 chr15 98901364 98901574 + 13.3 0.000 intron (NM_000875, intron 5 of 20) intron (NM_000875, intron 5 of 20) 104187 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr2-5626 chr2 189337803 189338013 + 13.3 0.000 Intergenic Intergenic -103525 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr12-4193 chr12 96365343 96365553 + 13.3 0.000 intron (NM_002595, intron 1 of 16) MIRc|SINE|MIR 34991 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr1-3559 chr1 245986772 245986982 + 13.3 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 430535 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr12-1964 chr12 117059261 117059471 + 13.3 0.000 intron (NR_031766, intron 2 of 7) intron (NR_031766, intron 2 of 7) 40050 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr11-3674 chr11 128766759 128766969 + 13.3 0.000 intron (NM_001271010, intron 3 of 9) UCON26|Unknown|Unknown -70841 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr11-3146 chr11 47328069 47328279 + 13.3 0.000 intron (NM_130476, intron 31 of 32) intron (NM_130476, intron 31 of 32) 24528 NM_000256 4607 Hs.524906 NM_000256 ENSG00000134571 MYBPC3 CMD1MM|CMH4|FHC|LVNC10|MYBP-C myosin binding protein C, cardiac protein-coding chrX-474 chrX 18833515 18833725 + 13.3 0.000 Intergenic LTR1C|LTR|ERV1 -56676 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr5-1228 chr5 149258042 149258252 + 13.3 0.000 intron (NM_001301028, intron 18 of 18) L2a|LINE|L2 -13691 NM_001323063 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr5-1995 chr5 172778124 172778334 + 13.3 0.000 Intergenic Intergenic -7034 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr16-2129 chr16 11323594 11323804 + 13.3 0.000 Intergenic Intergenic -17172 NR_031678 100313773 NR_031678 ENSG00000221801 MIR548H2 MIR548H-2|MIRN548H2 microRNA 548h-2 ncRNA chr2-2173 chr2 9690419 9690629 + 13.3 0.000 Intergenic Intergenic -59527 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chrX-1173 chrX 49915548 49915758 + 13.3 0.000 Intergenic L4_A_Mam|LINE|RTE-X -6943 NM_001127899 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr6-1591 chr6 27472997 27473207 + 13.3 0.000 promoter-TSS (NR_144687) promoter-TSS (NR_144687) 3 NM_001318893 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding chr10-1390 chr10 64396131 64396341 + 13.3 0.000 Intergenic Intergenic -429292 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr20-1648 chr20 23300529 23300739 + 13.3 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -50157 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding chr2-3480 chr2 182858791 182859001 + 13.3 0.000 intron (NM_001463, intron 1 of 5) intron (NM_001463, intron 1 of 5) 7741 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr8-2591 chr8 49997376 49997586 + 13.3 0.000 intron (NR_135798, intron 1 of 15) L2a|LINE|L2 86074 NR_135796 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr9-2097 chr9 86855117 86855327 + 13.3 0.000 Intergenic Intergenic 92284 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr1-7136 chr1 204323993 204324203 + 13.3 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 35831 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr14-394 chr14 58970367 58970577 + 13.3 0.000 intron (NR_110547, intron 4 of 5) intron (NR_110547, intron 4 of 5) 142184 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr13-1171 chr13 37640585 37640795 + 13.3 0.000 intron (NM_001135956, intron 7 of 10) intron (NM_001135956, intron 7 of 10) -41846 NM_001286666 10631 Hs.136348 NM_006475 ENSG00000133110 POSTN OSF-2|OSF2|PDLPOSTN|PN periostin protein-coding chr19-1963 chr19 52716248 52716458 + 13.3 0.000 intron (NM_030972, intron 3 of 6) intron (NM_030972, intron 3 of 6) 13529 NM_030972 81856 Hs.143951 NM_030972 ENSG00000213020 ZNF611 - zinc finger protein 611 protein-coding chr9-1806 chr9 72484067 72484277 + 13.3 0.000 Intergenic Intergenic -37629 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr8-1311 chr8 122786845 122787055 + 13.3 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 5295 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr14-1204 chr14 74442893 74443103 + 13.3 0.000 Intergenic L2c|LINE|L2 -16788 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr9-2474 chr9 38117750 38117960 + 13.3 0.000 Intergenic Intergenic -48628 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr14-1901 chr14 102629874 102630084 + 13.3 0.000 intron (NM_015156, intron 2 of 11) intron (NM_015156, intron 2 of 11) 37330 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr13-763 chr13 102983596 102983806 + 13.3 0.000 Intergenic Intergenic 82716 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr8-3461 chr8 95618381 95618591 + 13.3 0.000 intron (NR_038205, intron 2 of 2) MamGypLTR2c|LTR|Gypsy 329862 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr16-1614 chr16 84178704 84178914 + 13.3 0.000 TTS (NM_001318756) TTS (NM_001318756) 8248 NM_001243156 9013 Hs.153022 NM_005679 ENSG00000103168 TAF1C MGC:39976|SL1|TAFI110|TAFI95 TATA-box binding protein associated factor, RNA polymerase I subunit C protein-coding chr10-1534 chr10 77961737 77961947 + 13.3 0.000 Intergenic AluJb|SINE|Alu 35030 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr6-2265 chr6 70877487 70877697 + 13.3 0.000 intron (NM_080742, intron 2 of 3) intron (NM_080742, intron 2 of 3) 79468 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr5-1484 chr5 100535173 100535383 + 13.3 0.000 promoter-TSS (NM_198507) promoter-TSS (NM_198507) -96 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr8-1860 chr8 14125570 14125780 + 13.3 0.000 intron (NM_001322880, intron 4 of 6) L1PA10|LINE|L1 495985 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr17-2812 chr17 12023622 12023832 + 13.3 0.000 intron (NM_003010, intron 1 of 10) MIR|SINE|MIR 2850 NM_003010 6416 Hs.514681 NM_003010 ENSG00000065559 MAP2K4 JNKK|JNKK1|MAPKK4|MEK4|MKK4|PRKMK4|SAPKK-1|SAPKK1|SEK1|SERK1|SKK1 mitogen-activated protein kinase kinase 4 protein-coding chr5-2847 chr5 68087899 68088109 + 13.3 0.000 Intergenic MamTip3|DNA|hAT-Tip100 -101872 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr11-3761 chr11 46714672 46714882 + 13.3 0.000 Intergenic Intergenic -4389 NM_000506 2147 Hs.655207 NM_000506 ENSG00000180210 F2 PT|RPRGL2|THPH1 coagulation factor II, thrombin protein-coding chr3-2101 chr3 39416277 39416487 + 13.3 0.000 Intergenic MIRb|SINE|MIR 5328 NR_002324 6044 Hs.449909 NR_002324 ENSG00000202363 SNORA62 E2|E2-1|RNE2|RNU108 small nucleolar RNA, H/ACA box 62 snoRNA chr1-6076 chr1 97364248 97364458 + 13.3 0.000 intron (NM_000110, intron 16 of 22) intron (NM_000110, intron 16 of 22) 268430 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr2-3799 chr2 19819560 19819770 + 13.3 0.000 Intergenic Intergenic -49189 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr9-2162 chr9 126528113 126528323 + 13.3 0.000 Intergenic Intergenic -86225 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr17-2675 chr17 39232029 39232239 + 13.3 0.000 Intergenic Intergenic -6189 NM_198993 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr1-4162 chr1 19343482 19343692 + 13.3 0.000 intron (NM_001206540, intron 8 of 9) MIRc|SINE|MIR 31261 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr14-1346 chr14 90262822 90263032 + 13.3 0.000 intron (NM_002802, intron 3 of 10) intron (NM_002802, intron 3 of 10) 4988 NM_001330212 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr9-2123 chr9 99680308 99680518 + 13.3 0.000 intron (NR_109802, intron 3 of 6) intron (NR_109802, intron 3 of 6) 139476 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr20-770 chr20 43752560 43752770 + 13.3 0.000 Intergenic Intergenic -25663 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr12-1020 chr12 27142171 27142381 + 13.3 0.000 Intergenic Intergenic -59754 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr3-2989 chr3 89314511 89314721 + 13.3 0.000 intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 206995 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr7-2887 chr7 128537407 128537617 + 13.3 0.000 Intergenic AluYh3a3|SINE|Alu 60783 NM_018396 55798 Hs.433213 NM_018396 ENSG00000165055 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding chr8-2635 chr8 68789849 68790059 + 13.3 0.000 intron (NR_146187, intron 12 of 13) intron (NR_146187, intron 12 of 13) 314236 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr15-858 chr15 84749573 84749783 + 13.3 0.000 intron (NM_014630, intron 1 of 10) intron (NM_014630, intron 1 of 10) 1086 NM_014630 9640 Hs.79347 NM_014630 ENSG00000166716 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding chr4-6255 chr4 72205676 72205886 + 13.3 0.000 Intergenic L3|LINE|CR1 166649 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr18-1263 chr18 57762868 57763078 + 13.3 0.000 intron (NM_005603, intron 1 of 27) intron (NM_005603, intron 1 of 27) 40342 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr18-1198 chr18 30906931 30907141 + 13.3 0.000 Intergenic L1ME1|LINE|L1 135706 NM_001941 1825 Hs.41690 NM_001941 ENSG00000134762 DSC3 CDHF3|DSC|DSC1|DSC2|DSC4|HT-CP desmocollin 3 protein-coding chr9-2808 chr9 123048873 123049083 + 13.3 0.000 intron (NM_012197, intron 13 of 25) intron (NM_012197, intron 13 of 25) 15335 NM_005294 2844 Hs.722039 NM_005294 ENSG00000011454 GPR21 - G protein-coupled receptor 21 protein-coding chr15-1035 chr15 95839934 95840144 + 13.3 0.000 Intergenic Intergenic 287802 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr20-898 chr20 43767702 43767912 + 13.3 0.000 Intergenic Intergenic -40805 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr8-4307 chr8 98001881 98002091 + 13.3 0.000 intron (NM_002380, intron 7 of 18) MLT1L|LTR|ERVL-MaLR 40231 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr16-1645 chr16 28130190 28130400 + 13.3 0.000 intron (NM_001270940, intron 13 of 24) intron (NM_001270940, intron 13 of 24) -66581 NM_001323900 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr17-3574 chr17 80160780 80160990 + 13.3 0.000 Intergenic LTR36|LTR|ERV1 -9145 NR_047566 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr3-2093 chr3 23947641 23947851 + 13.3 0.000 intron (NM_001145425, intron 1 of 7) L3|LINE|CR1 1625 NM_001145425 9975 Hs.37288 NM_005126 ENSG00000174738 NR1D2 BD73|EAR-1R|REVERBB|REVERBbeta|RVR nuclear receptor subfamily 1 group D member 2 protein-coding chr12-1945 chr12 106358528 106358738 + 13.3 0.000 intron (NM_001160708, intron 1 of 27) intron (NM_001160708, intron 1 of 27) 551 NM_001160708 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding chr21-368 chr21 45504815 45505025 + 13.3 0.000 intron (NM_130445, intron 35 of 42) intron (NM_130445, intron 35 of 42) 26654 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr6-1192 chr6 167827689 167827899 + 13.3 0.000 promoter-TSS (NR_027906) intron (NM_001207008, intron 1 of 31) 159 NM_001291964 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding chr15-977 chr15 57926060 57926270 + 13.3 0.000 Intergenic Intergenic 87858 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr17-1996 chr17 78428558 78428768 + 13.3 0.000 exon (NM_173628, exon 77 of 81) exon (NM_173628, exon 77 of 81) 50014 NR_110601 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr16-1921 chr16 89851374 89851584 + 13.3 0.000 intron (NM_032451, intron 3 of 14) MIRb|SINE|MIR -22113 NM_014972 22980 Hs.415342 NM_014972 ENSG00000141002 TCF25 FKSG26|Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 protein-coding chr2-3671 chr2 177758788 177758998 + 13.3 0.000 intron (NM_001077197, intron 11 of 20) intron (NM_001077197, intron 11 of 20) 85571 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA chr3-2171 chr3 179410294 179410504 + 13.3 0.000 intron (NM_021629, intron 8 of 9) MLT1B|LTR|ERVL-MaLR 41071 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr1-6735 chr1 66253342 66253552 + 13.3 0.000 intron (NM_001037340, intron 2 of 14) intron (NM_001037340, intron 2 of 14) -78661 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr16-3371 chr16 56813169 56813379 + 13.3 0.000 intron (NM_014669, intron 5 of 21) MER104|DNA|TcMar-Tc2 29818 NM_001242796 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr19-2463 chr19 1794507 1794717 + 13.3 0.000 intron (NM_001178002, intron 18 of 28) L2c|LINE|L2 17664 NM_001178002 148229 Hs.306212 NM_138813 ENSG00000130270 ATP8B3 ATPIK ATPase phospholipid transporting 8B3 protein-coding chr5-1632 chr5 137563441 137563651 + 13.3 0.000 Intergenic MIRb|SINE|MIR -64220 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr2-1722 chr2 223896919 223897129 + 13.3 0.000 intron (NM_020830, intron 6 of 11) intron (NM_020830, intron 6 of 11) 48311 NM_020830 57590 Hs.368359 NM_020830 ENSG00000085449 WDFY1 FENS-1|FENS1|WDF1|ZFYVE17 WD repeat and FYVE domain containing 1 protein-coding chr1-3871 chr1 45520845 45521055 + 13.3 0.000 intron (NM_001202431, intron 1 of 5) intron (NM_001202431, intron 1 of 5) 934 NM_181697 5052 Hs.180909 NM_002574 ENSG00000117450 PRDX1 MSP23|NKEF-A|NKEFA|PAG|PAGA|PAGB|PRX1|PRXI|TDPX2 peroxiredoxin 1 protein-coding chr3-1738 chr3 142886880 142887090 + 13.3 0.000 intron (NM_013363, intron 2 of 8) intron (NM_013363, intron 2 of 8) 2098 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr14-1223 chr14 91012544 91012754 + 13.3 0.000 intron (NM_182398, intron 1 of 12) intron (NM_182398, intron 1 of 12) 47475 NM_001322237 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr2-3225 chr2 229911160 229911370 + 13.3 0.000 intron (NM_001348325, intron 1 of 42) intron (NM_001348325, intron 1 of 42) 10414 NM_001348334 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr4-1978 chr4 169118019 169118229 + 13.3 0.000 intron (NM_020870, intron 8 of 11) intron (NM_020870, intron 8 of 11) -107869 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr19-3361 chr19 10896962 10897172 + 13.3 0.000 intron (NM_001370089, intron 1 of 14) MER58A|DNA|hAT-Charlie 24638 NM_001370089 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr17-1638 chr17 17942891 17943101 + 13.3 0.000 intron (NM_001288787, intron 1 of 13) L1MC5|LINE|L1 29404 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr8-2287 chr8 119102614 119102824 + 13.3 0.000 intron (NM_001324095, intron 6 of 7) intron (NM_001324095, intron 6 of 7) -33937 NR_134297 101927513 Hs.676598 NR_134297 ENSG00000254278 LOC101927513 - uncharacterized LOC101927513 ncRNA chr6-2871 chr6 5337587 5337797 + 13.3 0.000 intron (NM_006567, intron 1 of 6) intron (NM_006567, intron 1 of 6) 76179 NM_006567 10667 Hs.484547 NM_006567 ENSG00000145982 FARS2 COXPD14|FARS1|HSPC320|PheRS|SPG77|mtPheRS phenylalanyl-tRNA synthetase 2, mitochondrial protein-coding chr8-1219 chr8 104643345 104643555 + 13.3 0.000 Intergenic Intergenic -54426 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr12-1930 chr12 102669103 102669313 + 13.3 0.000 Intergenic Intergenic 155191 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr13-802 chr13 110805157 110805367 + 13.3 0.000 Intergenic MIRb|SINE|MIR 7822 NR_135280 283486 Hs.447504 NR_135280 ENSG00000259831 LINC00567 - long intergenic non-protein coding RNA 567 ncRNA chr5-2906 chr5 126403942 126404152 + 13.3 0.000 intron (NM_001146319, intron 1 of 13) intron (NM_001146319, intron 1 of 13) -19099 NM_001146320 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr11-1254 chr11 111540634 111540844 + 13.3 0.000 5' UTR (NM_001258391, exon 1 of 6) 5' UTR (NM_001258391, exon 1 of 6) 231 NM_001258390 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr18-325 chr18 11308610 11308820 + 13.3 0.000 Intergenic MER65B|LTR|ERV1 -145763 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr11-1548 chr11 24497050 24497260 + 13.3 0.000 5' UTR (NM_001252010, exon 1 of 10) 5' UTR (NM_001252010, exon 1 of 10) 102 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr7-1271 chr7 110358124 110358334 + 13.3 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -398016 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr6-1755 chr6 55794406 55794616 + 13.3 0.000 intron (NM_001329754, intron 2 of 5) intron (NM_001329754, intron 2 of 5) 81079 NM_001329756 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr4-1631 chr4 78294109 78294319 + 13.3 0.000 intron (NM_001166133, intron 14 of 41) intron (NM_001166133, intron 14 of 41) 5229 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr7-1364 chr7 100087170 100087380 + 13.3 0.000 Intergenic MER4CL34|LTR|ERV1 -1694 NM_006833 10980 Hs.15591 NM_006833 ENSG00000168090 COPS6 CSN6|MOV34-34KD COP9 signalosome subunit 6 protein-coding chr12-860 chr12 15629191 15629401 + 13.3 0.000 intron (NM_004447, intron 18 of 20) intron (NM_004447, intron 18 of 20) 82685 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr19-1533 chr19 13505980 13506190 + 13.3 0.000 exon (NM_001127221, exon 1 of 47) exon (NM_001127221, exon 1 of 47) 375 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr18-620 chr18 8970022 8970232 + 13.3 0.000 Intergenic Intergenic -132572 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr11-2585 chr11 123132245 123132455 + 13.3 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 62898 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr17-1147 chr17 81233278 81233488 + 13.3 0.000 intron (NM_001363764, intron 7 of 12) intron (NM_001363764, intron 7 of 12) 4676 NR_135654 105371925 Hs.620720 NR_135654 LOC105371925 - uncharacterized LOC105371925 ncRNA chr16-1373 chr16 50196769 50196979 + 13.3 0.000 intron (NM_001365324, intron 1 of 11) AluJb|SINE|Alu 43393 NM_001365324 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr3-3992 chr3 57100048 57100258 + 13.3 0.000 intron (NM_001318864, intron 12 of 13) intron (NM_001318864, intron 12 of 13) -20885 NM_001128615 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr8-1067 chr8 86514543 86514753 + 13.3 0.000 promoter-TSS (NM_001317807) promoter-TSS (NM_001317807) 213 NM_003909 8895 Hs.191219 NM_003909 ENSG00000085719 CPNE3 CPN3|PRO1071 copine 3 protein-coding chr12-1809 chr12 3158947 3159157 + 13.3 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 81673 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr1-1132 chr1 183022274 183022484 + 13.3 0.000 Intergenic Intergenic -1041 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr21-354 chr21 42658031 42658241 + 13.3 0.000 intron (NM_001001575, intron 1 of 14) intron (NM_001001575, intron 1 of 14) 4384 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr1-3590 chr1 12161863 12162073 + 13.3 0.000 Intergenic Intergenic -4975 NR_107000 102465836 NR_107000 ENSG00000283789 MIR7846 hsa-mir-7846 microRNA 7846 ncRNA chr9-3725 chr9 114778785 114778995 + 13.3 0.000 Intergenic Intergenic 13640 NM_001204344 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr7-3917 chr7 126589096 126589306 + 13.3 0.000 intron (NM_001371085, intron 8 of 10) L1MA8|LINE|L1 468983 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr9-2608 chr9 7402223 7402433 + 13.3 0.000 Intergenic Intergenic 397450 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr10-1391 chr10 68135928 68136138 + 13.3 0.000 intron (NM_001256268, intron 4 of 23) intron (NM_001256268, intron 4 of 23) 26545 NR_045663 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr6-2099 chr6 157813221 157813431 + 13.3 0.000 Intergenic LTR49-int|LTR|ERV1 -9920 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr2-4144 chr2 172330511 172330721 + 13.3 0.000 Intergenic Intergenic -96720 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr1-4633 chr1 171081452 171081662 + 13.3 0.000 Intergenic Intergenic -9348 NM_001319173 2328 Hs.445350 NM_006894 ENSG00000007933 FMO3 FMOII|TMAU|dJ127D3.1 flavin containing dimethylaniline monoxygenase 3 protein-coding chr2-2484 chr2 131514039 131514249 + 13.3 0.000 intron (NR_026922, intron 10 of 17) intron (NR_026922, intron 10 of 17) -13531 NM_001258305 90557 Hs.351461 NM_138770 ENSG00000163040 CCDC74A - coiled-coil domain containing 74A protein-coding chr12-2037 chr12 65634892 65635102 + 13.3 0.000 intron (NR_120432, intron 1 of 4) MIR|SINE|MIR 7375 NR_120431 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr16-1127 chr16 65122484 65122694 + 13.3 0.000 promoter-TSS (NM_001308392) promoter-TSS (NM_001308392) -526 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr8-1580 chr8 130410474 130410684 + 13.3 0.000 intron (NM_001362925, intron 1 of 29) intron (NM_001362925, intron 1 of 29) 33081 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr15-1281 chr15 99085713 99085923 + 13.3 0.000 Intergenic L1ME3A|LINE|L1 -19262 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr7-1993 chr7 4641364 4641574 + 13.3 0.000 Intergenic Intergenic -40826 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr8-744 chr8 38520317 38520527 + 13.3 0.000 intron (NM_207412, intron 1 of 2) intron (NM_207412, intron 1 of 2) 8240 NM_207412 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr20-917 chr20 1183097 1183307 + 13.3 0.000 intron (NM_001304749, intron 1 of 1) intron (NM_001304749, intron 1 of 1) 1271 NM_018354 55321 Hs.516834 NM_018354 ENSG00000125895 TMEM74B C20orf46 transmembrane protein 74B protein-coding chr7-2124 chr7 31102209 31102419 + 13.3 0.000 intron (NM_001199636, intron 14 of 16) intron (NM_001199636, intron 14 of 16) 49853 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr11-2476 chr11 64373462 64373672 + 13.3 0.000 Intergenic Intergenic 4965 NR_031602 100302280 NR_031602 ENSG00000221273 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA chr11-3089 chr11 20439925 20440135 + 13.3 0.000 intron (NM_005788, intron 10 of 15) L1M5|LINE|L1 52314 NM_005788 10196 Hs.152337 NM_005788 ENSG00000185238 PRMT3 HRMT1L3 protein arginine methyltransferase 3 protein-coding chr12-1205 chr12 120264189 120264399 + 13.3 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 1436 NM_001080855 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr4-2471 chr4 2309828 2310038 + 13.3 0.000 intron (NM_020972, intron 7 of 12) L1ME3A|LINE|L1 -47824 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr3-4237 chr3 141080436 141080646 + 13.3 0.000 intron (NM_080862, intron 2 of 2) intron (NM_080862, intron 2 of 2) 29194 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr8-1055 chr8 23071635 23071845 + 13.3 0.000 intron (NR_038873, intron 1 of 2) intron (NR_038873, intron 1 of 2) -2709 NM_147187 8795 Hs.521456 NM_003842 ENSG00000120889 TNFRSF10B CD262|DR5|KILLER|KILLER/DR5|TRAIL-R2|TRAILR2|TRICK2|TRICK2A|TRICK2B|TRICKB|ZTNFR9 TNF receptor superfamily member 10b protein-coding chr19-1278 chr19 35257755 35257965 + 13.3 0.000 intron (NM_001260490, intron 2 of 6) intron (NM_001260490, intron 2 of 6) 9204 NM_001260490 51599 Hs.466507 NM_015925 ENSG00000105699 LSR ILDR3|LISCH7 lipolysis stimulated lipoprotein receptor protein-coding chr2-1794 chr2 20992332 20992542 + 13.3 0.000 Intergenic Intergenic 51636 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr1-8035 chr1 234957442 234957652 + 13.3 0.000 intron (NR_125945, intron 3 of 3) intron (NR_125945, intron 3 of 3) 6452 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr22-1640 chr22 37007943 37008153 + 13.3 0.000 promoter-TSS (NM_001163857) promoter-TSS (NM_001163857) -197 NM_001163857 339669 Hs.124502 NM_178552 ENSG00000185264 TEX33 C22orf33|EAN57|cE81G9.2 testis expressed 33 protein-coding chr20-1285 chr20 49149417 49149627 + 13.3 0.000 intron (NM_004602, intron 5 of 13) intron (NM_004602, intron 5 of 13) 38848 NM_001319134 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding chr10-2397 chr10 120607442 120607652 + 13.3 0.000 Intergenic Intergenic 9598 NR_103717 404216 Hs.196578 NM_001012711 ENSG00000177234 LINC01561 C10orf85 long intergenic non-protein coding RNA 1561 ncRNA chr3-2440 chr3 40843801 40844011 + 13.3 0.000 Intergenic LTR85a|LTR|Gypsy? 318946 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr3-2377 chr3 172801418 172801628 + 13.3 0.000 intron (NM_001349095, intron 18 of 25) L1ME1|LINE|L1 50521 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr8-1144 chr8 142788879 142789089 + 13.3 0.000 Intergenic Intergenic -2445 NM_003695 8581 Hs.415762 NM_003695 ENSG00000167656 LY6D E48|Ly-6D lymphocyte antigen 6 family member D protein-coding chr5-890 chr5 134177016 134177226 + 13.3 0.000 promoter-TSS (NM_170679) promoter-TSS (NM_170679) -88 NM_006930 6500 Hs.171626 NM_006930 ENSG00000113558 SKP1 EMC19|OCP-II|OCP2|SKP1A|TCEB1L|p19A S-phase kinase associated protein 1 protein-coding chr6-1243 chr6 682052 682262 + 13.3 0.000 intron (NR_073064, intron 2 of 29) intron (NR_073064, intron 2 of 29) 10982 NM_018303 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr4-1947 chr4 113959305 113959515 + 13.3 0.000 intron (NM_001354211, intron 4 of 6) intron (NM_001354211, intron 4 of 6) 20237 NM_001354211 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr8-902 chr8 85032020 85032230 + 13.3 0.000 Intergenic Intergenic -75113 NM_033402 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chrX-638 chrX 140512167 140512377 + 13.3 0.000 Intergenic Intergenic -7212 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr1-3440 chr1 20012737 20012947 + 13.3 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -32408 NM_001161727 5320 Hs.466804 NM_000300 ENSG00000188257 PLA2G2A MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2 phospholipase A2 group IIA protein-coding chr7-1113 chr7 108132619 108132829 + 13.3 0.000 Intergenic Intergenic -2363 NM_007356 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr8-4026 chr8 59263824 59264034 + 13.3 0.000 Intergenic Intergenic 144719 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr10-954 chr10 35640999 35641209 + 13.3 0.000 TTS (NR_039831) TTS (NR_039831) 148 NR_039831 100616500 NR_039831 ENSG00000284265 MIR4683 - microRNA 4683 ncRNA chr2-3656 chr2 166371475 166371685 + 13.3 0.000 intron (NM_001365536, intron 1 of 26) intron (NM_001365536, intron 1 of 26) 4364 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr1-2073 chr1 33112100 33112310 + 13.3 0.000 intron (NR_146648, intron 10 of 11) L1ME3E|LINE|L1 30027 NM_001301826 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr19-1942 chr19 18814183 18814393 + 13.3 0.000 Intergenic Intergenic -17671 NM_001297549 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr10-2058 chr10 94108360 94108570 + 13.3 0.000 non-coding (NR_120615, exon 1 of 3) non-coding (NR_120615, exon 1 of 3) 329 NR_120616 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr1-2759 chr1 63179026 63179236 + 13.3 0.000 intron (NR_038252, intron 6 of 11) FRAM|SINE|Alu 138126 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr14-1713 chr14 22356689 22356899 + 13.3 0.000 Intergenic L1PA5|LINE|L1 75959 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr14-472 chr14 103519343 103519553 + 13.3 0.000 TTS (NM_001823) TTS (NM_001823) 3382 NM_001823 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr17-3030 chr17 77848076 77848286 + 13.3 0.000 Intergenic L1ME3A|LINE|L1 35906 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr4-1422 chr4 39469341 39469551 + 13.3 0.000 intron (NM_194451, intron 7 of 9) intron (NM_194451, intron 7 of 9) 10390 NM_001363700 11019 Hs.550502 NM_006859 ENSG00000121897 LIAS HGCLAS|HUSSY-01|LAS|LIP1|LS|PDHLD lipoic acid synthetase protein-coding chr10-2407 chr10 125407047 125407257 + 13.3 0.000 Intergenic L1MA3|LINE|L1 -167219 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr9-2148 chr9 120875177 120875387 + 13.3 0.000 intron (NM_001286840, intron 1 of 14) intron (NM_001286840, intron 1 of 14) 1906 NM_015651 26147 Hs.460124 NM_015651 ENSG00000119403 PHF19 MTF2L1|PCL3|TDRD19B PHD finger protein 19 protein-coding chr8-1548 chr8 115649820 115650030 + 13.3 0.000 intron (NM_014112, intron 1 of 6) intron (NM_014112, intron 1 of 6) 18088 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr3-1360 chr3 195863113 195863323 + 13.3 0.000 TTS (NM_005781) TTS (NM_005781) -2814 NR_134939 101929697 Hs.551750 NR_134939 LINC01983 - long intergenic non-protein coding RNA 1983 ncRNA chr19-2752 chr19 40818699 40818909 + 13.3 0.000 Intergenic Intergenic -7704 NR_144551 171523 Hs.656713 NR_144551 ENSG00000233622 CYP2T1P CYP2T2P cytochrome P450 family 2 subfamily T member 1, pseudogene pseudo chr1-2764 chr1 88878765 88878975 + 13.3 0.000 intron (NM_001514, intron 2 of 6) MLT1G3|LTR|ERVL-MaLR 12697 NM_001514 2959 Hs.481852 NM_001514 ENSG00000137947 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding chr20-637 chr20 51351381 51351591 + 13.3 0.000 Intergenic AluSz|SINE|Alu 101491 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr10-1827 chr10 11533475 11533685 + 13.3 0.000 intron (NM_014688, intron 2 of 14) MLT1D|LTR|ERVL-MaLR -1300 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr11-3548 chr11 20544167 20544377 + 13.3 0.000 Intergenic MIR|SINE|MIR -55128 NM_001318369 9152 Hs.136557 NM_004211 ENSG00000165970 SLC6A5 GLYT-2|GLYT2|HKPX3|NET1 solute carrier family 6 member 5 protein-coding chr7-2498 chr7 20562085 20562295 + 13.3 0.000 Intergenic Charlie15a|DNA|hAT-Charlie -53477 NM_001163941 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding chr2-2543 chr2 203623206 203623416 + 13.3 0.000 Intergenic Intergenic -83164 NM_001243078 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr2-4039 chr2 109533910 109534120 + 13.3 0.000 Intergenic Intergenic 79652 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr15-2599 chr15 63154281 63154491 + 13.3 0.000 intron (NM_015920, intron 3 of 3) intron (NM_015920, intron 3 of 3) 3091 NM_015920 51065 Hs.108957 NM_015920 ENSG00000185088 RPS27L - ribosomal protein S27 like protein-coding chr1-6265 chr1 241336401 241336611 + 13.3 0.000 intron (NM_001350116, intron 1 of 16) intron (NM_001350116, intron 1 of 16) 19320 NM_001350116 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr4-3450 chr4 95434429 95434639 + 13.3 0.000 intron (NM_003728, intron 1 of 15) intron (NM_003728, intron 1 of 15) 114439 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr3-1958 chr3 47837775 47837985 + 13.3 0.000 intron (NM_001330990, intron 7 of 22) intron (NM_001330990, intron 7 of 22) -11675 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr7-1257 chr7 44214608 44214818 + 13.3 0.000 TTS (NM_001363678) TTS (NM_001363678) 13735 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr17-4712 chr17 31092813 31093023 + 13.3 0.000 Intergenic Intergenic 1507 NR_039886 100616266 NR_039886 ENSG00000265444 MIR4733 - microRNA 4733 ncRNA chr2-5204 chr2 42086666 42086876 + 13.3 0.000 Intergenic Intergenic 38750 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr10-1626 chr10 76576270 76576480 + 13.3 0.000 Intergenic Intergenic -311669 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr3-3406 chr3 77467733 77467943 + 13.3 0.000 intron (NM_001290039, intron 2 of 26) intron (NM_001290039, intron 2 of 26) 369826 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr16-1601 chr16 60043837 60044047 + 13.3 0.000 intron (NR_110917, intron 1 of 3) intron (NR_110917, intron 1 of 3) 188589 NR_110917 101927580 Hs.552235 NR_110917 ENSG00000261807 LINC02141 - long intergenic non-protein coding RNA 2141 ncRNA chr7-1789 chr7 80827143 80827353 + 13.3 0.000 intron (NM_006379, intron 4 of 17) intron (NM_006379, intron 4 of 17) 91803 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr16-1842 chr16 66167994 66168204 + 13.3 0.000 Intergenic Intergenic -198592 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr9-2001 chr9 129496757 129496967 + 13.3 0.000 intron (NR_038955, intron 2 of 4) CpG 8202 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr8-724 chr8 80958360 80958570 + 13.3 0.000 Intergenic Intergenic -83684 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr1-2026 chr1 155970677 155970887 + 13.3 0.000 intron (NM_001350112, intron 1 of 21) intron (NM_001350112, intron 1 of 21) 7393 NM_001350111 9181 Hs.743352 NM_004723 ENSG00000116584 ARHGEF2 GEF|GEF-H1|GEFH1|LFP40|NEDMHM|P40 Rho/Rac guanine nucleotide exchange factor 2 protein-coding chr13-1853 chr13 111315660 111315870 + 13.3 0.000 promoter-TSS (NM_001303133) promoter-TSS (NM_001303133) -420 NM_001303133 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr11-1278 chr11 67145815 67146025 + 13.3 0.000 intron (NR_027473, intron 2 of 20) intron (NR_027473, intron 2 of 20) 26657 NR_027473 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr11-2133 chr11 16286224 16286434 + 13.3 0.000 intron (NM_033326, intron 3 of 15) intron (NM_033326, intron 3 of 15) 70217 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr5-3988 chr5 15644851 15645061 + 13.3 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -29954 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr10-1746 chr10 133422971 133423181 + 13.3 0.000 TTS (NM_138384) TTS (NM_138384) 1541 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chr17-1113 chr17 7234264 7234474 + 13.3 0.000 TTS (NM_024297) TTS (NM_024297) 148 NM_004422 1856 Hs.118640 NM_004422 ENSG00000004975 DVL2 - dishevelled segment polarity protein 2 protein-coding chr7-2104 chr7 6322968 6323178 + 13.3 0.000 Intergenic Intergenic 25894 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chr7-1626 chr7 22663262 22663472 + 13.3 0.000 non-coding (NR_122075, exon 2 of 5) non-coding (NR_122075, exon 2 of 5) 2166 NR_122075 401312 Hs.583393 NR_122075 ENSG00000105889 LOC401312 - uncharacterized LOC401312 ncRNA chr11-2209 chr11 61739476 61739686 + 13.3 0.000 exon (NM_006133, exon 17 of 20) exon (NM_006133, exon 17 of 20) -13055 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr9-1203 chr9 123102816 123103026 + 13.3 0.000 intron (NM_012197, intron 25 of 25) intron (NM_012197, intron 25 of 25) 8722 NR_030331 693185 NR_030331 ENSG00000283941 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA chr17-1972 chr17 28865198 28865408 + 13.3 0.000 Intergenic Intergenic -3573 NR_039885 100616385 NR_039885 ENSG00000284085 MIR4732 mir-4732 microRNA 4732 ncRNA chr8-1039 chr8 103406430 103406640 + 13.3 0.000 intron (NR_102338, intron 3 of 7) intron (NR_102338, intron 3 of 7) 8572 NM_030780 81034 Hs.532265 NM_030780 ENSG00000164933 SLC25A32 MFT|MFTC|RREI solute carrier family 25 member 32 protein-coding chr12-1353 chr12 15789427 15789637 + 13.3 0.000 promoter-TSS (NM_004447) promoter-TSS (NM_004447) -144 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr14-1090 chr14 51513455 51513665 + 13.3 0.000 intron (NM_001042481, intron 1 of 14) intron (NM_001042481, intron 1 of 14) 24432 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr7-2636 chr7 1945591 1945801 + 13.3 0.000 intron (NM_001013837, intron 16 of 18) intron (NM_001013837, intron 16 of 18) -5125 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr5-1504 chr5 136249767 136249977 + 13.3 0.000 intron (NM_020389, intron 6 of 11) intron (NM_020389, intron 6 of 11) 23217 NR_133682 106478968 Hs.637713 NR_133682 ENSG00000250947 TRPC7-AS2 CTB-28J9.2 TRPC7 antisense RNA 2 ncRNA chrX-2861 chrX 141862508 141862718 + 13.3 0.000 intron (NM_138702, intron 1 of 7) L1MA4A|LINE|L1 24297 NM_138702 139081 Hs.356870 NM_138702 ENSG00000165509 MAGEC3 CT7.2|HCA2|MAGE-C3|MAGEC4 MAGE family member C3 protein-coding chr9-2482 chr9 79189519 79189729 + 13.3 0.000 Intergenic MIR3|SINE|MIR -43958 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr3-2741 chr3 132399297 132399507 + 13.3 0.000 Intergenic Intergenic -18100 NM_001329126 23317 Hs.12707 NM_015268 ENSG00000138246 DNAJC13 PARK21|RME8 DnaJ heat shock protein family (Hsp40) member C13 protein-coding chr14-707 chr14 85566614 85566824 + 13.3 0.000 intron (NM_001346143, intron 1 of 1) intron (NM_001346143, intron 1 of 1) 33370 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr1-3078 chr1 24920308 24920518 + 13.3 0.000 promoter-TSS (NR_106789) promoter-TSS (NR_106789) -997 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr15-817 chr15 84654232 84654442 + 13.3 0.000 promoter-TSS (NR_130944) promoter-TSS (NR_130944) 6 NM_032856 84942 Hs.745027 NM_032856 ENSG00000177082 WDR73 GAMOS|GAMOS1|HSPC264 WD repeat domain 73 protein-coding chr2-4842 chr2 78015841 78016051 + 13.3 0.000 intron (NR_110288, intron 1 of 3) Tigger1|DNA|TcMar-Tigger -60920 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA chr2-4165 chr2 180656999 180657209 + 13.3 0.000 Intergenic Intergenic -35000 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chrX-2900 chrX 149962924 149963134 + 13.3 0.000 intron (NR_027456, intron 9 of 11) intron (NR_027456, intron 9 of 11) 24481 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr18-1041 chr18 3623958 3624168 + 13.3 0.000 intron (NM_001242761, intron 7 of 11) intron (NM_001242761, intron 7 of 11) 20326 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr7-811 chr7 1065872 1066082 + 13.3 0.000 intron (NM_001134395, intron 2 of 4) CpG 10607 NM_001303474 115330 Hs.585007 NM_138445 ENSG00000164849 GPR146 PGR8 G protein-coupled receptor 146 protein-coding chr22-1037 chr22 37210004 37210214 + 13.3 0.000 intron (NM_001051, intron 1 of 1) intron (NM_001051, intron 1 of 1) 580 NM_001278687 6753 Hs.225995 NM_001051 ENSG00000278195 SSTR3 SS-3-R|SS3-R|SS3R|SSR-28 somatostatin receptor 3 protein-coding chr9-781 chr9 32573175 32573385 + 13.3 0.000 promoter-TSS (NM_002493) promoter-TSS (NM_002493) -96 NM_001199987 4712 Hs.493668 NM_002493 ENSG00000165264 NDUFB6 B17|CI NADH:ubiquinone oxidoreductase subunit B6 protein-coding chr12-3373 chr12 96879051 96879261 + 13.3 0.000 Intergenic L2c|LINE|L2 -28101 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr2-4205 chr2 202113892 202114102 + 13.3 0.000 non-coding (NR_135244, exon 3 of 4) non-coding (NR_135244, exon 3 of 4) 3061 NR_135243 729224 Hs.623895 NR_135243 KIAA2012-AS1 - KIAA2012 antisense RNA 1 ncRNA chr5-1679 chr5 68046491 68046701 + 13.3 0.000 Intergenic MER44C|DNA|TcMar-Tigger -143280 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr9-2450 chr9 14320351 14320561 + 13.3 0.000 intron (NM_001369458, intron 1 of 11) intron (NM_001369458, intron 1 of 11) 1931 NM_001369473 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr1-4853 chr1 28553493 28553703 + 13.3 0.000 intron (NM_017846, intron 1 of 8) intron (NM_017846, intron 1 of 8) 513 NM_017846 54952 Hs.533626 NM_017846 ENSG00000180098 TRNAU1AP PRO1902|SECP43|TRSPAP1 tRNA selenocysteine 1 associated protein 1 protein-coding chr2-3172 chr2 201909621 201909831 + 13.3 0.000 Intergenic Intergenic 103147 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr1-4197 chr1 66354558 66354768 + 13.3 0.000 5' UTR (NM_001297442, exon 1 of 10) 5' UTR (NM_001297442, exon 1 of 10) 128 NM_001297442 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr1-5626 chr1 20974637 20974847 + 13.3 0.000 intron (NM_003760, intron 5 of 31) L2|LINE|L2 13690 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr11-2979 chr11 93051172 93051382 + 13.3 0.000 Intergenic Intergenic 81654 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr6-2132 chr6 4125965 4126175 + 13.3 0.000 non-coding (NR_104463, exon 6 of 8) non-coding (NR_104463, exon 6 of 8) 9398 NM_001166010 10455 Hs.15250 NM_006117 ENSG00000198721 ECI2 ACBD2|DRS-1|DRS1|HCA88|PECI|dJ1013A10.3 enoyl-CoA delta isomerase 2 protein-coding chr18-506 chr18 33951081 33951291 + 13.3 0.000 intron (NM_001198546, intron 7 of 9) L1MEd|LINE|L1 97426 NM_001353236 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr15-1691 chr15 61545887 61546097 + 13.3 0.000 Intergenic Intergenic -183926 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr6-2323 chr6 111925387 111925597 + 13.3 0.000 Intergenic Intergenic -16095 NR_149099 105377946 NR_149099 LINC02527 - long intergenic non-protein coding RNA 2527 ncRNA chr16-1861 chr16 75506578 75506788 + 13.3 0.000 Intergenic Intergenic -11242 NR_163481 4166 Hs.655622 NM_021615 ENSG00000183196 CHST6 C-GlcNAc6ST|GST4-beta|MCDC1|glcNAc6ST-5|gn6st-5|hCGn6ST carbohydrate sulfotransferase 6 protein-coding chr14-1485 chr14 32828666 32828876 + 13.3 0.000 intron (NM_004274, intron 13 of 13) intron (NM_004274, intron 13 of 13) -110108 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr2-3653 chr2 161139577 161139787 + 13.3 0.000 intron (NM_004180, intron 1 of 7) intron (NM_004180, intron 1 of 7) 2719 NM_004180 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr2-4011 chr2 100011446 100011656 + 13.3 0.000 exon (NM_001025108, exon 3 of 24) exon (NM_001025108, exon 3 of 24) 94032 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr17-1335 chr17 29933418 29933628 + 13.3 0.000 intron (NM_001145053, intron 1 of 14) intron (NM_001145053, intron 1 of 14) -3295 NM_001282129 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr1-2940 chr1 56686401 56686611 + 13.3 0.000 intron (NM_006252, intron 2 of 8) MSTB|LTR|ERVL-MaLR -41188 NR_135111 101929935 NR_135111 LOC101929935 - uncharacterized LOC101929935 ncRNA chr7-608 chr7 33904881 33905091 + 13.3 0.000 promoter-TSS (NM_001365308) promoter-TSS (NM_001365308) 71 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr3-1744 chr3 156633475 156633685 + 13.3 0.000 Intergenic Intergenic -41010 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr2-5563 chr2 169038404 169038614 + 13.3 0.000 Intergenic Intergenic -7185 NM_003742 8647 Hs.158316 NM_003742 ENSG00000073734 ABCB11 ABC16|BRIC2|BSEP|PFIC-2|PFIC2|PGY4|SPGP ATP binding cassette subfamily B member 11 protein-coding chr12-3465 chr12 120199939 120200149 + 13.3 0.000 intron (NM_001002, intron 2 of 7) intron (NM_001002, intron 2 of 7) 1067 NM_001002 6175 Hs.546285 NM_001002 ENSG00000089157 RPLP0 L10E|LP0|P0|PRLP0|RPP0 ribosomal protein lateral stalk subunit P0 protein-coding chr7-2931 chr7 135709707 135709917 + 13.3 0.000 intron (NM_001318192, intron 2 of 15) L2c|LINE|L2 18374 NM_012450 26266 Hs.490241 NM_012450 ENSG00000164707 SLC13A4 NAS2|SUT-1|SUT1 solute carrier family 13 member 4 protein-coding chr13-564 chr13 31629140 31629350 + 13.3 0.000 Intergenic L1M1|LINE|L1 -110281 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chrX-619 chrX 40716552 40716762 + 13.3 0.000 intron (NM_004229, intron 3 of 30) L1MA4|LINE|L1 -18739 NM_001289773 100873985 Hs.460579 NM_001289773 MED14OS MED14-AS1 MED14 opposite strand protein-coding chr16-1422 chr16 11248648 11248858 + 13.3 0.000 Intergenic AluSz|SINE|Alu 7429 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr6-1817 chr6 142207358 142207568 + 13.3 0.000 intron (NM_016485, intron 7 of 7) L1MA4|LINE|L1 60200 NM_016485 51534 Hs.431367 NM_016485 ENSG00000009844 VTA1 C6orf55|DRG-1|DRG1|HSPC228|LIP5|My012|SBP1 vesicle trafficking 1 protein-coding chr13-1465 chr13 79988688 79988898 + 13.3 0.000 Intergenic Intergenic -22284 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr6-1338 chr6 35360394 35360604 + 13.3 0.000 intron (NM_001171819, intron 2 of 6) MIRb|SINE|MIR 17941 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr8-4654 chr8 135466741 135466951 + 13.3 0.000 intron (NM_006558, intron 1 of 8) intron (NM_006558, intron 1 of 8) 9390 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr9-1798 chr9 34074320 34074530 + 13.3 0.000 Intergenic Intergenic -25226 NM_001370059 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr2-3626 chr2 115290540 115290750 + 13.3 0.000 intron (NM_001321906, intron 2 of 26) intron (NM_001321906, intron 2 of 26) -18592 NM_020868 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr6-2273 chr6 73733056 73733266 + 13.3 0.000 intron (NM_001159587, intron 4 of 32) intron (NM_001159587, intron 4 of 32) 36958 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr12-3126 chr12 32312042 32312252 + 13.3 0.000 intron (NR_148725, intron 4 of 9) intron (NR_148725, intron 4 of 9) -87411 NM_001370298 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr9-1885 chr9 112180249 112180459 + 13.3 0.000 Intergenic Intergenic -5057 NM_022486 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr2-3945 chr2 63791053 63791263 + 13.3 0.000 Intergenic Intergenic -49806 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr3-4290 chr3 156811259 156811469 + 13.3 0.000 non-coding (NR_003284, exon 1 of 1) non-coding (NR_003284, exon 1 of 1) 657 NR_003284 647033 Hs.745109 NR_003284 PA2G4P4 PA2G4L1 proliferation-associated 2G4 pseudogene 4 pseudo chr4-1563 chr4 1782486 1782696 + 13.3 0.000 Intergenic Intergenic -10702 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr12-1207 chr12 123712925 123713135 + 13.3 0.000 intron (NM_012463, intron 1 of 19) L2a|LINE|L2 677 NM_012463 23545 Hs.25786 NM_012463 ENSG00000185344 ATP6V0A2 A2|ARCL|ARCL2A|ATP6A2|ATP6N1D|J6B7|RTF|STV1|TJ6|TJ6M|TJ6S|VPH1|WSS ATPase H+ transporting V0 subunit a2 protein-coding chr22-445 chr22 38467980 38468190 + 13.3 0.000 promoter-TSS (NM_006855) promoter-TSS (NM_006855) -11 NM_006855 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr9-2122 chr9 98958510 98958720 + 13.3 0.000 intron (NM_001855, intron 2 of 41) intron (NM_001855, intron 2 of 41) 14708 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr12-1389 chr12 103841696 103841906 + 13.3 0.000 promoter-TSS (NM_001031701) promoter-TSS (NM_001031701) -567 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr7-1338 chr7 24927071 24927281 + 13.3 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) -34555 NR_104111 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr15-1099 chr15 68421905 68422115 + 13.3 0.000 intron (NM_001004439, intron 1 of 29) intron (NM_001004439, intron 1 of 29) 10153 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr2-7909 chr2 57303142 57303352 + 13.3 0.000 Intergenic Intergenic -604404 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr2-3175 chr2 203843298 203843508 + 13.3 0.000 Intergenic Intergenic -24368 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr5-997 chr5 68178820 68179030 + 13.3 0.000 Intergenic MLT2C1|LTR|ERVL -10951 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr5-1101 chr5 149465053 149465263 + 13.3 0.000 Intergenic FLAM_C|SINE|Alu 34512 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr16-1444 chr16 68539748 68539958 + 13.3 0.000 intron (NR_130976, intron 2 of 4) intron (NR_130976, intron 2 of 4) 562 NM_001305207 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr1-4757 chr1 9009003 9009213 + 13.3 0.000 intron (NM_207420, intron 9 of 11) intron (NM_207420, intron 9 of 11) 17237 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr9-2979 chr9 33821360 33821570 + 13.3 0.000 intron (NM_017811, intron 1 of 4) intron (NM_017811, intron 1 of 4) 4305 NM_017811 54926 Hs.643648 NM_017811 ENSG00000107341 UBE2R2 CDC34B|E2-CDC34B|UBC3B ubiquitin conjugating enzyme E2 R2 protein-coding chr4-1885 chr4 5747918 5748128 + 13.3 0.000 intron (NM_001306090, intron 7 of 20) intron (NM_001306090, intron 7 of 20) 36822 NM_153717 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr5-2088 chr5 643764 643974 + 13.3 0.000 intron (NM_018140, intron 9 of 11) intron (NM_018140, intron 9 of 11) 31529 NM_018140 55722 Hs.591741 NM_018140 ENSG00000112877 CEP72 - centrosomal protein 72 protein-coding chr1-3463 chr1 41023410 41023620 + 13.3 0.000 intron (NR_037868, intron 1 of 3) intron (NR_037868, intron 1 of 3) -1760 NM_001168247 200172 Hs.194609 NM_144990 ENSG00000171790 SLFNL1 - schlafen like 1 protein-coding chr13-1722 chr13 98274920 98275130 + 13.3 0.000 intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 66501 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr11-2344 chr11 76574451 76574661 + 13.3 0.000 Intergenic L1MCc|LINE|L1 95382 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr3-2331 chr3 133594784 133594994 + 13.3 0.000 Intergenic Intergenic 20455 NM_001282765 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr16-969 chr16 25106985 25107195 + 13.3 0.000 intron (NR_120306, intron 1 of 2) CpG 4465 NR_120306 102723510 Hs.569596 NR_120306 LCMT1-AS1 - LCMT1 antisense RNA 1 ncRNA chr16-1925 chr16 90020048 90020258 + 13.3 0.000 promoter-TSS (NM_001288709) promoter-TSS (NM_001288709) -22 NM_001288709 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr11-1054 chr11 59755748 59755958 + 13.3 0.000 intron (NM_001178040, intron 1 of 9) intron (NM_001178040, intron 1 of 9) 477 NM_001178040 6809 Hs.180711 NM_004177 ENSG00000166900 STX3 STX3A syntaxin 3 protein-coding chr10-2425 chr10 536175 536385 + 13.3 0.000 intron (NM_014974, intron 1 of 36) MLT1C|LTR|ERVL-MaLR -92284 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr3-2201 chr3 14428237 14428447 + 13.3 0.000 intron (NM_001134367, intron 2 of 14) intron (NM_001134367, intron 2 of 14) 25736 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr15-1125 chr15 40471834 40472044 + 13.3 0.000 exon (NM_130468, exon 1 of 1) exon (NM_130468, exon 1 of 1) 978 NM_130468 113189 Hs.442449 NM_130468 ENSG00000169105 CHST14 ATCS|D4ST1|EDSMC1|HNK1ST carbohydrate sulfotransferase 14 protein-coding chr11-2408 chr11 8834405 8834615 + 13.3 0.000 intron (NM_005418, intron 3 of 22) intron (NM_005418, intron 3 of 22) -23175 NM_139157 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr11-6966 chr11 114519736 114519946 + 13.2 0.000 3' UTR (NM_001367953, exon 8 of 8) 3' UTR (NM_001367953, exon 8 of 8) 40040 NM_001367953 120400 Hs.550126 NM_152315 ENSG00000095110 NXPE1 FAM55A neurexophilin and PC-esterase domain family member 1 protein-coding chr6-4061 chr6 136995672 136995882 + 13.2 0.000 Intergenic L1ME3B|LINE|L1 -2546 NR_027994 100294720 Hs.520412 NR_027994 ENSG00000225391 NHEG1 - neuroblastoma highly expressed 1 ncRNA chr4-2086 chr4 30822159 30822369 + 13.2 0.000 intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 101895 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr13-1070 chr13 37058959 37059169 + 13.2 0.000 intron (NM_001014286, intron 1 of 25) intron (NM_001014286, intron 1 of 25) 423 NM_001278482 55578 Hs.435815 NM_017569 ENSG00000102710 SUPT20H C13|C13orf19|FAM48A|FP757|P38IP|SPT20 SPT20 homolog, SAGA complex component protein-coding chr15-3229 chr15 73882897 73883107 + 13.2 0.000 intron (NM_001286434, intron 2 of 9) intron (NM_001286434, intron 2 of 9) 9438 NM_153356 161514 Hs.124512 NM_153356 ENSG00000167139 TBC1D21 MgcRabGAP TBC1 domain family member 21 protein-coding chr16-1793 chr16 3014386 3014596 + 13.2 0.000 TTS (NM_021195) TTS (NM_021195) 1568 NM_020982 9080 Hs.296949 NM_020982 ENSG00000213937 CLDN9 - claudin 9 protein-coding chr14-1690 chr14 98313676 98313886 + 13.2 0.000 Intergenic AluSx1|SINE|Alu -335657 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr6-1302 chr6 1390345 1390555 + 13.2 0.000 promoter-TSS (NR_106778) promoter-TSS (NR_106778) -39 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr10-2440 chr10 5076758 5076968 + 13.2 0.000 intron (NM_001253908, intron 1 of 8) intron (NM_001253908, intron 1 of 8) -17551 NM_001253909 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding chr10-5860 chr10 114514559 114514769 + 13.2 0.000 intron (NM_001352440, intron 6 of 20) AluJb|SINE|Alu 12249 NM_001322888 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr10-2473 chr10 26840329 26840539 + 13.2 0.000 intron (NM_001178116, intron 1 of 11) MSTB1|LTR|ERVL-MaLR 20653 NM_001178124 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr10-4054 chr10 31491122 31491332 + 13.2 0.000 intron (NM_001323678, intron 2 of 6) L1MD2|LINE|L1 -91472 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr13-968 chr13 113797089 113797299 + 13.2 0.000 intron (NM_182614, intron 4 of 8) intron (NM_182614, intron 4 of 8) -18416 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr4-1535 chr4 147481119 147481329 + 13.2 0.000 non-coding (NR_148964, exon 1 of 6) non-coding (NR_148964, exon 1 of 6) 127 NR_148963 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr13-992 chr13 64158994 64159204 + 13.2 0.000 Intergenic L1MEc|LINE|L1 -83088 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr17-1734 chr17 80677732 80677942 + 13.2 0.000 intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 127795 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr14-1224 chr14 91229885 91230095 + 13.2 0.000 Intergenic Intergenic 14714 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr5-2194 chr5 149302077 149302287 + 13.2 0.000 intron (NM_152406, intron 4 of 18) Charlie23a|DNA|hAT-Charlie 30323 NM_001323062 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr22-677 chr22 20703219 20703429 + 13.2 0.000 intron (NR_026815, intron 3 of 7) CpG-18798 2210 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chr12-880 chr12 79515380 79515590 + 13.2 0.000 Intergenic L1M3b|LINE|L1 96228 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr2-3374 chr2 8750217 8750427 + 13.2 0.000 exon (NM_001348741, exon 24 of 29) exon (NM_001348741, exon 24 of 29) 68266 NM_002166 3398 Hs.180919 NM_002166 ENSG00000115738 ID2 GIG8|ID2A|ID2H|bHLHb26 inhibitor of DNA binding 2 protein-coding chr11-4831 chr11 12889271 12889481 + 13.2 0.000 intron (NM_021961, intron 9 of 12) intron (NM_021961, intron 9 of 12) 100172 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr7-7548 chr7 114752555 114752765 + 13.2 0.000 Intergenic L2|LINE|L2 99315 NR_037439 100500896 NR_037439 ENSG00000272230 MIR3666 - microRNA 3666 ncRNA chr6-1165 chr6 34609648 34609858 + 13.2 0.000 intron (NM_022758, intron 2 of 3) intron (NM_022758, intron 2 of 3) -53420 NM_001252294 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr11-4819 chr11 10136492 10136702 + 13.2 0.000 intron (NM_030962, intron 2 of 39) MER21C|LTR|ERVL 157610 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr12-1827 chr12 13208840 13209050 + 13.2 0.000 intron (NM_001423, intron 1 of 4) intron (NM_001423, intron 1 of 4) 12219 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr10-1961 chr10 27822421 27822631 + 13.2 0.000 intron (NM_018076, intron 19 of 19) intron (NM_018076, intron 19 of 19) -76707 NM_001242702 283078 Hs.128193 NM_173576 ENSG00000150051 MKX C10orf48|IFRX|IRXL1 mohawk homeobox protein-coding chrX-689 chrX 41781557 41781767 + 13.2 0.000 intron (NM_003688, intron 3 of 26) intron (NM_003688, intron 3 of 26) 57481 NM_080817 27197 Hs.567457 NM_080817 ENSG00000171657 GPR82 - G protein-coupled receptor 82 protein-coding chr2-2403 chr2 24491639 24491849 + 13.2 0.000 promoter-TSS (NM_001362954) promoter-TSS (NM_001362954) -133 NM_001362955 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr13-1073 chr13 41588881 41589091 + 13.2 0.000 intron (NM_015058, intron 41 of 44) intron (NM_015058, intron 41 of 44) -20591 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr3-5011 chr3 25203069 25203279 + 13.2 0.000 intron (NM_001290216, intron 4 of 10) L1PA4|LINE|L1 -137628 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr1-2182 chr1 45300287 45300497 + 13.2 0.000 Intergenic Intergenic -3518 NR_024270 400752 Hs.334348 NR_024270 ENSG00000281912 LINC01144 - long intergenic non-protein coding RNA 1144 ncRNA chr1-5350 chr1 233237743 233237953 + 13.2 0.000 intron (NM_014801, intron 8 of 33) MLT1L|LTR|ERVL-MaLR 57877 NM_001328607 80003 Hs.370605 NM_014801 ENSG00000135749 PCNX2 PCNXL2 pecanex 2 protein-coding chr12-2267 chr12 102336662 102336872 + 13.2 0.000 Intergenic L1MEc|LINE|L1 -138934 NM_002674 5367 Hs.707990 NM_002674 ENSG00000183395 PMCH MCH|ppMCH pro-melanin concentrating hormone protein-coding chr7-2074 chr7 323472 323682 + 13.2 0.000 Intergenic LTR54|LTR|ERV1 -55848 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr1-2880 chr1 226403998 226404208 + 13.2 0.000 intron (NM_001618, intron 1 of 22) intron (NM_001618, intron 1 of 22) 3990 NM_001618 142 Hs.177766 NM_001618 ENSG00000143799 PARP1 ADPRT|ADPRT 1|ADPRT1|ARTD1|PARP|PARP-1|PPOL|pADPRT-1 poly(ADP-ribose) polymerase 1 protein-coding chr5-2883 chr5 96516837 96517047 + 13.2 0.000 intron (NR_130776, intron 4 of 4) MIR3|SINE|MIR -83694 NM_000439 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr11-2807 chr11 116960966 116961176 + 13.2 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) -123121 NM_000039 335 Hs.93194 NM_000039 ENSG00000118137 APOA1 apo(a) apolipoprotein A1 protein-coding chr2-2942 chr2 10169745 10169955 + 13.2 0.000 intron (NR_161344, intron 3 of 3) LTR85a|LTR|Gypsy? 22821 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr1-3219 chr1 173853159 173853369 + 13.2 0.000 intron (NM_018122, intron 13 of 16) intron (NM_018122, intron 13 of 16) -9984 NR_037605 100506046 Hs.656411 NR_037605 GAS5-AS1 - GAS5 antisense RNA 1 ncRNA chr1-5097 chr1 116218790 116219000 + 13.2 0.000 Intergenic LTR16B1|LTR|ERVL 107140 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr12-1658 chr12 50202016 50202226 + 13.2 0.000 promoter-TSS (NM_001243775) promoter-TSS (NM_001243775) -588 NM_001243775 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr5-6698 chr5 64759156 64759366 + 13.2 0.000 intron (NM_173829, intron 1 of 4) MLT1N2|LTR|ERVL-MaLR 9430 NM_173829 285672 Hs.69504 NM_173829 ENSG00000153006 SREK1IP1 P18SRP|SFRS12IP1 SREK1 interacting protein 1 protein-coding chr2-9080 chr2 202646342 202646552 + 13.2 0.000 intron (NM_173511, intron 1 of 7) HAL1|LINE|L1 11478 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr5-2201 chr5 159182873 159183083 + 13.2 0.000 intron (NM_001199383, intron 3 of 10) intron (NM_001199383, intron 3 of 10) 24670 NM_001199382 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chr3-5217 chr3 80481526 80481736 + 13.2 0.000 Intergenic AluY|SINE|Alu -283266 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr1-4673 chr1 214901566 214901776 + 13.2 0.000 Intergenic Intergenic -103871 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr17-1787 chr17 68577270 68577480 + 13.2 0.000 intron (NM_017565, intron 1 of 10) intron (NM_017565, intron 1 of 10) -18948 NR_027751 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding chr15-1096 chr15 65870428 65870638 + 13.2 0.000 intron (NM_004663, intron 1 of 4) intron (NM_004663, intron 1 of 4) 1042 NM_001206836 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr22-1904 chr22 45783180 45783390 + 13.2 0.000 intron (NM_013236, intron 9 of 11) Tigger7|DNA|TcMar-Tigger 22761 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr1-3712 chr1 209883653 209883863 + 13.2 0.000 Intergenic Intergenic -54416 NR_027459 255928 Hs.658866 NM_153262 ENSG00000143469 SYT14 SCAR11|sytXIV synaptotagmin 14 protein-coding chr11-2798 chr11 98409369 98409579 + 13.2 0.000 Intergenic Intergenic -611475 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr4-4487 chr4 57070417 57070627 + 13.2 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -39240 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr12-1847 chr12 43826795 43827005 + 13.2 0.000 Intergenic Intergenic -8961 NM_001286213 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr11-3736 chr11 28384359 28384569 + 13.2 0.000 Intergenic AluSx|SINE|Alu 93084 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr19-2614 chr19 2734343 2734553 + 13.2 0.000 TTS (NM_213568) TTS (NM_213568) 5569 NM_144564 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr14-522 chr14 55398747 55398957 + 13.2 0.000 intron (NM_014924, intron 1 of 9) intron (NM_014924, intron 1 of 9) 13006 NM_014924 22863 Hs.414809 NM_014924 ENSG00000126775 ATG14 ATG14L|BARKOR|KIAA0831 autophagy related 14 protein-coding chr13-2509 chr13 58492407 58492617 + 13.2 0.000 Intergenic Intergenic -259395 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr7-2392 chr7 46034566 46034776 + 13.2 0.000 Intergenic Intergenic -113399 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr11-4549 chr11 122035997 122036207 + 13.2 0.000 intron (NR_137178, intron 3 of 4) intron (NR_137178, intron 3 of 4) 63742 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr5-3357 chr5 137753009 137753219 + 13.2 0.000 3' UTR (NM_006805, exon 1 of 1) 3' UTR (NM_006805, exon 1 of 1) 1249 NM_006805 10949 Hs.96996 NM_006805 ENSG00000177733 HNRNPA0 HNRPA0 heterogeneous nuclear ribonucleoprotein A0 protein-coding chr8-2436 chr8 105599776 105599986 + 13.2 0.000 intron (NM_001362837, intron 4 of 7) intron (NM_001362837, intron 4 of 7) 280338 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr17-1342 chr17 40335182 40335392 + 13.2 0.000 intron (NM_001145302, intron 2 of 6) intron (NM_001145302, intron 2 of 6) -6879 NM_001024809 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding chr14-2020 chr14 59333902 59334112 + 13.2 0.000 intron (NM_001270520, intron 15 of 24) intron (NM_001270520, intron 15 of 24) 70566 NM_014992 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr9-3268 chr9 32815736 32815946 + 13.2 0.000 Intergenic Intergenic 32301 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr10-4092 chr10 58820817 58821027 + 13.2 0.000 intron (NM_001080512, intron 20 of 20) intron (NM_001080512, intron 20 of 20) 105907 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr3-3599 chr3 72139816 72140026 + 13.2 0.000 Intergenic L2b|LINE|L2 -11336 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr11-4027 chr11 9380724 9380934 + 13.2 0.000 Intergenic Intergenic -3823 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chrX-420 chrX 20067224 20067434 + 13.2 0.000 intron (NM_152780, intron 1 of 15) intron (NM_152780, intron 1 of 15) 49311 NM_001168467 256714 Hs.127951 NM_152780 ENSG00000184368 MAP7D2 - MAP7 domain containing 2 protein-coding chr4-4762 chr4 98851894 98852104 + 13.2 0.000 Intergenic Intergenic 77134 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr3-4783 chr3 118879882 118880092 + 13.2 0.000 Intergenic Intergenic -63089 NR_046230 100506765 Hs.660823 NR_046230 ENSG00000239877 IGSF11-AS1 - IGSF11 antisense RNA 1 ncRNA chr6-621 chr6 28335652 28335862 + 13.2 0.000 intron (NM_001243242, intron 1 of 3) LTR25|LTR|ERV1 377 NM_001135216 64288 Hs.656413 NM_030899 ENSG00000235109 ZSCAN31 ZNF20-Lp|ZNF310P|ZNF323 zinc finger and SCAN domain containing 31 protein-coding chr7-1738 chr7 28155948 28156158 + 13.2 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -24404 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chrX-586 chrX 108303480 108303690 + 13.2 0.000 intron (NM_001287758, intron 3 of 45) intron (NM_001287758, intron 3 of 45) 134837 NM_033641 1288 Hs.145586 NM_001847 ENSG00000197565 COL4A6 CXDELq22.3|DELXq22.3|DFNX6 collagen type IV alpha 6 chain protein-coding chr3-1523 chr3 160729850 160730060 + 13.2 0.000 Intergenic L2a|LINE|L2 -26276 NM_139245 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr17-2634 chr17 5031831 5032041 + 13.2 0.000 TTS (NM_017986) TTS (NM_017986) 3490 NM_017986 55065 Hs.632247 NM_017986 ENSG00000132517 SLC52A1 GPCR42|GPR172B|PAR2|RBFVD|RFT1|RFVT1|hRFT1 solute carrier family 52 member 1 protein-coding chr20-1138 chr20 38470041 38470251 + 13.2 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -2697 NM_001282917 57148 Hs.598850 NM_020336 ENSG00000170471 RALGAPB KIAA1219|RalGAPbeta Ral GTPase activating protein non-catalytic beta subunit protein-coding chrX-800 chrX 65499596 65499806 + 13.2 0.000 intron (NM_001010888, intron 3 of 4) intron (NM_001010888, intron 3 of 4) 10966 NM_001010888 340554 Hs.21249 NM_001010888 ENSG00000102053 ZC3H12B CXorf32|MCPIP2 zinc finger CCCH-type containing 12B protein-coding chr11-1369 chr11 73158513 73158723 + 13.2 0.000 Intergenic Intergenic -16300 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr14-1582 chr14 86893006 86893216 + 13.2 0.000 Intergenic Intergenic -12667 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr11-4179 chr11 58616724 58616934 + 13.2 0.000 intron (NM_001197051, intron 10 of 10) intron (NM_001197051, intron 10 of 10) -5836 NM_000614 1270 Hs.524920 NM_000614 ENSG00000242689 CNTF HCNTF ciliary neurotrophic factor protein-coding chr10-1485 chr10 132230813 132231023 + 13.2 0.000 intron (NM_001318878, intron 2 of 11) intron (NM_001318878, intron 2 of 11) 18190 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr10-2687 chr10 100628579 100628789 + 13.2 0.000 Intergenic Intergenic 92741 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr6-2228 chr6 44287737 44287947 + 13.2 0.000 5' UTR (NM_182539, exon 2 of 5) 5' UTR (NM_182539, exon 2 of 5) 9856 NM_182539 202500 Hs.189183 NM_182539 ENSG00000146221 TCTE1 D6S46|DRC5|FAP155 t-complex-associated-testis-expressed 1 protein-coding chr12-585 chr12 123151124 123151334 + 13.2 0.000 Intergenic CpG -40740 NM_001300801 57605 Hs.272759 NM_020845 ENSG00000090975 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein membrane associated 2 protein-coding chr5-1460 chr5 68216612 68216822 + 13.2 0.000 intron (NM_181523, intron 1 of 15) intron (NM_181523, intron 1 of 15) 961 NM_181523 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr11-2169 chr11 126080281 126080491 + 13.2 0.000 Intergenic Intergenic -17094 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr6-3526 chr6 37024693 37024903 + 13.2 0.000 intron (NM_173558, intron 13 of 15) intron (NM_173558, intron 13 of 15) 19143 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr14-1548 chr14 66830519 66830729 + 13.2 0.000 intron (NM_001024218, intron 4 of 21) intron (NM_001024218, intron 4 of 21) 323217 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr16-967 chr16 11796343 11796553 + 13.2 0.000 intron (NM_014153, intron 1 of 22) intron (NM_014153, intron 1 of 22) 810 NM_014153 29066 Hs.371856 NM_014153 ENSG00000122299 ZC3H7A HSPC055|ZC3H7|ZC3HDC7 zinc finger CCCH-type containing 7A protein-coding chr9-3587 chr9 77178377 77178587 + 13.2 0.000 promoter-TSS (NR_026668) promoter-TSS (NR_026668) -565 NR_026668 100286938 Hs.662256 NR_026668 ENSG00000232998 VPS13A-AS1 - VPS13A antisense RNA 1 ncRNA chr4-2604 chr4 132666293 132666503 + 13.2 0.000 intron (NR_126401, intron 3 of 3) intron (NR_126401, intron 3 of 3) 75309 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr1-6974 chr1 161792771 161792981 + 13.2 0.000 intron (NM_007348, intron 6 of 15) intron (NM_007348, intron 6 of 15) 26556 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chr20-2177 chr20 46333413 46333623 + 13.2 0.000 Intergenic Intergenic -25020 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr14-1520 chr14 54182734 54182944 + 13.2 0.000 Intergenic Intergenic -214029 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr16-1451 chr16 75653829 75654039 + 13.2 0.000 intron (NR_144545, intron 1 of 2) LTR16A|LTR|ERVL 6161 NM_018975 54386 Hs.301419 NM_018975 ENSG00000166848 TERF2IP DRIP5|RAP1 TERF2 interacting protein protein-coding chr14-428 chr14 104794105 104794315 + 13.2 0.000 promoter-TSS (NM_005163) promoter-TSS (NM_005163) -609 NM_005163 207 Hs.525622 NM_005163 ENSG00000142208 AKT1 AKT|CWS6|PKB|PKB-ALPHA|PRKBA|RAC|RAC-ALPHA AKT serine/threonine kinase 1 protein-coding chr4-1238 chr4 2285529 2285739 + 13.2 0.000 intron (NM_020972, intron 8 of 12) intron (NM_020972, intron 8 of 12) -23525 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr12-1234 chr12 20188529 20188739 + 13.2 0.000 Intergenic LTR16A|LTR|ERVL -60733 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr13-2291 chr13 30034503 30034713 + 13.2 0.000 Intergenic Intergenic 74267 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr12-3161 chr12 49014540 49014750 + 13.2 0.000 intron (NM_001206709, intron 1 of 11) intron (NM_001206709, intron 1 of 11) 4131 NM_002733 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding chr4-2098 chr4 42258758 42258968 + 13.2 0.000 Intergenic L2c|LINE|L2 -106208 NM_207406 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr20-2630 chr20 42364644 42364854 + 13.2 0.000 intron (NM_133170, intron 9 of 31) intron (NM_133170, intron 9 of 31) -320734 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr16-1583 chr16 89524216 89524426 + 13.2 0.000 intron (NM_001363850, intron 4 of 17) intron (NM_001363850, intron 4 of 17) 15918 NM_199367 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7 matrix AAA peptidase subunit, paraplegin protein-coding chr16-2430 chr16 80151059 80151269 + 13.2 0.000 Intergenic Intergenic 355915 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr2-3916 chr2 48420868 48421078 + 13.2 0.000 Intergenic Intergenic -19793 NM_001135629 129285 Hs.654619 NM_152994 ENSG00000162869 PPP1R21 CCDC128|KLRAQ1 protein phosphatase 1 regulatory subunit 21 protein-coding chr5-2389 chr5 95984466 95984676 + 13.2 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 22570 NR_130776 101929710 NR_130776 ENSG00000251314 LOC101929710 - uncharacterized LOC101929710 ncRNA chr11-2681 chr11 74025541 74025751 + 13.2 0.000 intron (NM_001286577, intron 32 of 32) MIR3|SINE|MIR -16409 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr10-3732 chr10 116387893 116388103 + 13.2 0.000 Intergenic MIR|SINE|MIR -39849 NM_001011709 119548 Hs.276724 NM_001011709 ENSG00000203837 PNLIPRP3 - pancreatic lipase related protein 3 protein-coding chr19-1152 chr19 52170461 52170671 + 13.2 0.000 intron (NM_001102657, intron 1 of 4) intron (NM_001102657, intron 1 of 4) 1055 NM_001102657 162962 Hs.631584 NM_001102657 ENSG00000196267 ZNF836 - zinc finger protein 836 protein-coding chr4-3102 chr4 155073598 155073808 + 13.2 0.000 Intergenic Intergenic -134933 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr2-3550 chr2 20945298 20945508 + 13.2 0.000 Intergenic Intergenic 98670 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr15-1055 chr15 64738189 64738399 + 13.2 0.000 Intergenic Intergenic 22923 NR_138364 348093 Hs.436518 NM_194272 ENSG00000166831 RBPMS2 - RNA binding protein, mRNA processing factor 2 protein-coding chr16-1148 chr16 400169 400379 + 13.2 0.000 exon (NM_001286436, exon 5 of 5) exon (NM_001286436, exon 5 of 5) -1611 NM_020664 26063 Hs.628831 NM_020664 ENSG00000242612 DECR2 PDCR|SDR17C1 2,4-dienoyl-CoA reductase 2 protein-coding chr5-1879 chr5 148150731 148150941 + 13.2 0.000 Intergenic L2c|LINE|L2 -17710 NM_001001325 408187 Hs.553815 NM_001001325 ENSG00000196800 SPINK14 SPINK5L2 serine peptidase inhibitor, Kazal type 14 (putative) protein-coding chr12-874 chr12 53344953 53345163 + 13.2 0.000 promoter-TSS (NM_001300837) promoter-TSS (NM_001300837) -265 NM_001300837 121340 Hs.209402 NM_152860 ENSG00000170374 SP7 OI11|OI12|OSX|osterix Sp7 transcription factor protein-coding chr4-6461 chr4 142743176 142743386 + 13.2 0.000 intron (NM_001331040, intron 1 of 25) L1M4a1|LINE|L1 103254 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr16-2863 chr16 87151046 87151256 + 13.2 0.000 Intergenic Intergenic -60964 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr1-1785 chr1 40084860 40085070 + 13.2 0.000 intron (NM_001363695, intron 5 of 7) LTR13|LTR|ERVK 12287 NM_001363695 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding chr1-2367 chr1 67750250 67750460 + 13.2 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 65154 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr9-4422 chr9 7893394 7893604 + 13.2 0.000 Intergenic Intergenic -93721 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr4-1176 chr4 3106763 3106973 + 13.2 0.000 intron (NM_002111, intron 5 of 66) intron (NM_002111, intron 5 of 66) 32187 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr6-522 chr6 159693479 159693689 + 13.2 0.000 promoter-TSS (NM_000636) promoter-TSS (NM_000636) -256 NM_001322816 6648 Hs.487046 NM_000636 ENSG00000112096 SOD2 IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD superoxide dismutase 2 protein-coding chr22-1262 chr22 26722213 26722423 + 13.2 0.000 intron (NR_110543, intron 2 of 5) intron (NR_110543, intron 2 of 5) 49475 NR_110543 102724827 Hs.642767 NR_110543 MIATNB - MIAT neighbor ncRNA chr7-1062 chr7 1121293 1121503 + 13.2 0.000 intron (NM_001350970, intron 2 of 2) intron (NM_001350970, intron 2 of 2) 16849 NM_001318252 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr20-962 chr20 37324078 37324288 + 13.2 0.000 Intergenic L1ME2z|LINE|L1 -20502 NM_005417 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chrX-632 chrX 118448460 118448670 + 13.2 0.000 intron (NM_001184966, intron 17 of 17) intron (NM_001184966, intron 17 of 17) -47344 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr10-3723 chr10 114258059 114258269 + 13.2 0.000 intron (NM_001272046, intron 4 of 13) intron (NM_001272046, intron 4 of 13) 18550 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr1-3405 chr1 228405615 228405825 + 13.2 0.000 intron (NM_145214, intron 1 of 5) intron (NM_145214, intron 1 of 5) 1115 NM_145214 81559 Hs.13543 NM_145214 ENSG00000154370 TRIM11 BIA1|RNF92 tripartite motif containing 11 protein-coding chr17-2769 chr17 1272098 1272308 + 13.2 0.000 TTS (NM_001164405) TTS (NM_001164405) 1639 NM_001164405 727857 Hs.723790 NM_001164405 ENSG00000205899 BHLHA9 BHLHF42|CCSPD basic helix-loop-helix family member a9 protein-coding chr16-1245 chr16 2144013 2144223 + 13.2 0.000 Intergenic Intergenic -4026 NM_001308053 25837 Hs.3797 NM_014353 ENSG00000167964 RAB26 V46133 RAB26, member RAS oncogene family protein-coding chr20-311 chr20 9068391 9068601 + 13.2 0.000 promoter-TSS (NM_001172646) promoter-TSS (NM_001172646) -558 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr2-2723 chr2 98504320 98504530 + 13.2 0.000 intron (NM_001351428, intron 1 of 24) intron (NM_001351428, intron 1 of 24) 58415 NM_001351428 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr8-1948 chr8 53079282 53079492 + 13.2 0.000 Intergenic Intergenic 139479 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr17-2425 chr17 82728332 82728542 + 13.2 0.000 TTS (NM_024619) TTS (NM_024619) -7178 NM_022158 64122 Hs.151135 NM_022158 ENSG00000167363 FN3K - fructosamine 3 kinase protein-coding chr1-5689 chr1 51168451 51168661 + 13.2 0.000 Intergenic ERVL-E-int|LTR|ERVL 66328 NM_001136508 284546 Hs.176177 NM_001136508 ENSG00000204006 C1orf185 - chromosome 1 open reading frame 185 protein-coding chr1-6873 chr1 114787461 114787671 + 13.2 0.000 Intergenic L1PA8|LINE|L1 -6881 NR_049742 80143 Hs.709277 NM_025073 ENSG00000052723 SIKE1 SIKE suppressor of IKBKE 1 protein-coding chr10-1417 chr10 124606759 124606969 + 13.2 0.000 intron (NM_022126, intron 6 of 6) (CCCTGT)n|Simple_repeat|Simple_repeat -97164 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr10-2365 chr10 94403662 94403872 + 13.2 0.000 intron (NM_015188, intron 1 of 12) intron (NM_015188, intron 1 of 12) 1226 NM_015188 23232 Hs.500598 NM_015188 ENSG00000108239 TBC1D12 - TBC1 domain family member 12 protein-coding chr1-5354 chr1 234621967 234622177 + 13.2 0.000 Intergenic Intergenic -7239 NR_033927 100302691 Hs.209162 NR_033927 ENSG00000224939 LINC00184 HANC|NCRNA00184 long intergenic non-protein coding RNA 184 ncRNA chr1-3625 chr1 45508631 45508841 + 13.2 0.000 intron (NM_001330540, intron 3 of 3) intron (NM_001330540, intron 3 of 3) 8436 NM_015506 25974 Hs.13024 NM_015506 ENSG00000132763 MMACHC cblC metabolism of cobalamin associated C protein-coding chr3-1225 chr3 105938106 105938316 + 13.2 0.000 Intergenic Intergenic -68810 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr2-4123 chr2 158761770 158761980 + 13.2 0.000 Intergenic Intergenic -26873 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr2-7796 chr2 43852652 43852862 + 13.2 0.000 exon (NM_022437, exon 6 of 13) exon (NM_022437, exon 6 of 13) 13786 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr12-1856 chr12 48985295 48985505 + 13.2 0.000 Intergenic Intergenic 7078 NM_005430 7471 Hs.248164 NM_005430 ENSG00000125084 WNT1 BMND16|INT1|OI15 Wnt family member 1 protein-coding chr10-2031 chr10 75764591 75764801 + 13.2 0.000 intron (NR_131178, intron 1 of 7) intron (NR_131178, intron 1 of 7) -18065 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr3-4410 chr3 197955985 197956195 + 13.2 0.000 3' UTR (NM_001316311, exon 5 of 5) 3' UTR (NM_001316311, exon 5 of 5) 3901 NM_032263 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding chrX-1206 chrX 71622961 71623171 + 13.2 0.000 Intergenic Intergenic -4555 NM_001142797 2833 Hs.198252 NM_001504 ENSG00000186810 CXCR3 CD182|CD183|CKR-L2|CMKAR3|GPR9|IP10-R|Mig-R|MigR C-X-C motif chemokine receptor 3 protein-coding chr7-1935 chr7 45258681 45258891 + 13.2 0.000 Intergenic L2|LINE|L2 100995 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr15-2241 chr15 101216918 101217128 + 13.2 0.000 intron (NM_014918, intron 2 of 2) L1MC3|LINE|L1 35025 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr9-3200 chr9 131707877 131708087 + 13.2 0.000 intron (NM_001304275, intron 1 of 23) L1MC5a|LINE|L1 1860 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr4-2167 chr4 96296958 96297168 + 13.2 0.000 Intergenic Intergenic -13640 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr6-2255 chr6 55448566 55448776 + 13.2 0.000 intron (NR_109869, intron 3 of 4) intron (NR_109869, intron 3 of 4) 121202 NM_207410 389400 Hs.526967 NM_207410 ENSG00000187871 GFRAL C6orf144|GRAL|UNQ9356|bA360D14.1 GDNF family receptor alpha like protein-coding chr2-4106 chr2 149741663 149741873 + 13.2 0.000 intron (NR_110240, intron 1 of 2) intron (NR_110240, intron 1 of 2) 117423 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr22-736 chr22 42755611 42755821 + 13.2 0.000 Intergenic Intergenic -34415 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr20-1741 chr20 46438318 46438528 + 13.2 0.000 intron (NR_146919, intron 3 of 3) intron (NR_146919, intron 3 of 3) 19220 NR_045983 100130934 Hs.712133 NM_173643 ZNF663P ZNF663 zinc finger protein 663, pseudogene pseudo chr2-3354 chr2 224165830 224166040 + 13.2 0.000 Intergenic Intergenic -126616 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr12-1298 chr12 124071243 124071453 + 13.2 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 98133 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr7-2683 chr7 17625221 17625431 + 13.2 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -66417 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chrX-235 chrX 53093891 53094101 + 13.2 0.000 promoter-TSS (NR_145976) promoter-TSS (NR_145976) -161 NR_110456 102723508 Hs.633244 NR_110456 KANTR LINC01155|Spasm KDM5C adjacent transcript ncRNA chrX-524 chrX 47658608 47658818 + 13.2 0.000 promoter-TSS (NR_028119) promoter-TSS (NR_028119) -120 NR_028119 100133957 Hs.546106 NR_027444 ENSG00000267064 UXT-AS1 - UXT antisense RNA 1 ncRNA chr6-4973 chr6 106849558 106849768 + 13.2 0.000 Intergenic Intergenic -62122 NR_147986 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr2-1579 chr2 64859911 64860121 + 13.2 0.000 intron (NR_110224, intron 1 of 4) CpG 3615 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr12-3331 chr12 89023339 89023549 + 13.2 0.000 Intergenic Intergenic -3752 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr4-2994 chr4 120922065 120922275 + 13.2 0.000 intron (NM_001300824, intron 1 of 13) CpG 696 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr6-1976 chr6 157068844 157069054 + 13.2 0.000 intron (NM_001363725, intron 2 of 17) intron (NM_001363725, intron 2 of 17) 32522 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr7-3770 chr7 80883526 80883736 + 13.2 0.000 intron (NM_006379, intron 2 of 17) intron (NM_006379, intron 2 of 17) 35420 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr10-1692 chr10 12720443 12720653 + 13.2 0.000 intron (NM_001351032, intron 5 of 11) MamGypsy2-I|LTR|Gypsy 4805 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr7-5608 chr7 51298809 51299019 + 13.2 0.000 intron (NM_015198, intron 1 of 12) intron (NM_015198, intron 1 of 12) 17895 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr10-1648 chr10 101442284 101442494 + 13.2 0.000 intron (NM_001256856, intron 2 of 13) intron (NM_001256856, intron 2 of 13) 88224 NM_033637 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr7-1972 chr7 139434417 139434627 + 13.2 0.000 Intergenic Intergenic -6996 NR_033999 100129148 Hs.744449 NR_033999 LOC100129148 - uncharacterized LOC100129148 ncRNA chr14-962 chr14 61661602 61661812 + 13.2 0.000 Intergenic Intergenic -33806 NM_001530 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr5-1533 chr5 170673641 170673851 + 13.2 0.000 intron (NM_001278340, intron 2 of 8) intron (NM_001278340, intron 2 of 8) 7724 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr15-1231 chr15 67134154 67134364 + 13.2 0.000 intron (NM_001145102, intron 1 of 8) intron (NM_001145102, intron 1 of 8) -3762 NM_001145103 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr17-2692 chr17 50503680 50503890 + 13.2 0.000 Intergenic Intergenic -4654 NM_001366294 84073 Hs.398196 NM_032133 ENSG00000136449 MYCBPAP AMAP-1|AMAP1 MYCBP associated protein protein-coding chr11-2726 chr11 9387229 9387439 + 13.2 0.000 intron (NM_006391, intron 1 of 24) L2a|LINE|L2 2682 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chr12-1695 chr12 123592069 123592279 + 13.2 0.000 intron (NM_006815, intron 3 of 3) intron (NM_006815, intron 3 of 3) 7622 NM_001321445 10959 Hs.733403 NM_006815 ENSG00000086598 TMED2 P24A|RNP24|p24|p24b1|p24beta1 transmembrane p24 trafficking protein 2 protein-coding chr10-2621 chr10 80195059 80195269 + 13.2 0.000 intron (NM_001278408, intron 1 of 16) intron (NM_001278408, intron 1 of 16) 9327 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr5-2953 chr5 154680484 154680694 + 13.2 0.000 Intergenic Intergenic -2390 NM_001367713 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr6-2676 chr6 13049667 13049877 + 13.2 0.000 intron (NM_001322314, intron 1 of 12) intron (NM_001322314, intron 1 of 12) 36218 NM_001322314 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr5-1794 chr5 55154875 55155085 + 13.2 0.000 intron (NM_001145734, intron 2 of 10) intron (NM_001145734, intron 2 of 10) -5191 NM_001008397 493869 Hs.289044 NM_001008397 ENSG00000164294 GPX8 EPLA847|GPx-8|GSHPx-8|UNQ847 glutathione peroxidase 8 (putative) protein-coding chr11-4051 chr11 13594056 13594266 + 13.2 0.000 Intergenic L2|LINE|L2 -74507 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding chr11-2529 chr11 75523700 75523910 + 13.2 0.000 intron (NM_030792, intron 1 of 16) intron (NM_030792, intron 1 of 16) 1768 NM_001351168 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr1-2120 chr1 202967365 202967575 + 13.2 0.000 promoter-TSS (NM_016243) promoter-TSS (NM_016243) -213 NM_016243 51706 Hs.334832 NM_016243 ENSG00000159348 CYB5R1 B5R.1|B5R1|B5R2|NQO3A2|humb5R2 cytochrome b5 reductase 1 protein-coding chr9-2315 chr9 2838064 2838274 + 13.2 0.000 intron (NM_014878, intron 2 of 17) intron (NM_014878, intron 2 of 17) 5926 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chr1-5233 chr1 201027183 201027393 + 13.2 0.000 Intergenic MIR3|SINE|MIR -3574 NM_001252100 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr5-899 chr5 178232626 178232836 + 13.2 0.000 promoter-TSS (NM_153373) promoter-TSS (NM_153373) 71 NM_153373 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr11-2420 chr11 12717978 12718188 + 13.2 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 43662 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr8-1750 chr8 27515967 27516177 + 13.2 0.000 intron (NM_001979, intron 7 of 18) MER91B|DNA|hAT-Tip100 24929 NM_001256482 2053 Hs.212088 NM_001979 ENSG00000120915 EPHX2 ABHD20|CEH|SEH epoxide hydrolase 2 protein-coding chr1-4819 chr1 22320489 22320699 + 13.2 0.000 Intergenic MIR|SINE|MIR 54355 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr10-498 chr10 35336240 35336450 + 13.2 0.000 promoter-TSS (NM_001282852) promoter-TSS (NM_001282852) -164 NM_145012 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr5-1675 chr5 58318571 58318781 + 13.2 0.000 Intergenic Intergenic 141410 NM_006622 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding chr18-750 chr18 70015366 70015576 + 13.2 0.000 intron (NM_001318520, intron 45 of 47) intron (NM_001318520, intron 45 of 47) -58672 NM_006566 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr3-2631 chr3 196064041 196064251 + 13.2 0.000 intron (NM_001313966, intron 9 of 16) intron (NM_001313966, intron 9 of 16) 17944 NM_001128148 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr8-1478 chr8 30315704 30315914 + 13.2 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -68692 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr17-2080 chr17 78847253 78847463 + 13.2 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -6831 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr21-288 chr21 44021427 44021637 + 13.2 0.000 intron (NM_003274, intron 1 of 22) L1MC5|LINE|L1 9223 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr2-3023 chr2 63581354 63581564 + 13.2 0.000 intron (NR_148704, intron 1 of 18) L1MEc|LINE|L1 7018 NM_001354044 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr1-4018 chr1 180157226 180157436 + 13.2 0.000 intron (NM_002826, intron 1 of 11) intron (NM_002826, intron 1 of 11) 2462 NM_002826 5768 Hs.719176 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr16-1325 chr16 3170881 3171091 + 13.2 0.000 Intergenic CpG -17218 NM_001370640 4992 Hs.664502 NM_012360 ENSG00000168124 OR1F1 OLFMF|OR16-36|OR16-37|OR16-88|OR16-89|OR16-90|OR1F10|OR1F13P|OR1F4|OR1F5|OR1F6|OR1F7|OR1F8|OR1F9|OR3-145|ORL1023 olfactory receptor family 1 subfamily F member 1 protein-coding chr15-2524 chr15 41259211 41259421 + 13.2 0.000 intron (NM_007236, intron 3 of 6) intron (NM_007236, intron 3 of 6) -24674 NR_152822 729082 Hs.380164 NR_026757 ENSG00000247556 OIP5-AS1 cyrano|linc-OIP5 OIP5 antisense RNA 1 ncRNA chr4-3474 chr4 122602542 122602752 + 13.2 0.000 Intergenic Intergenic -16336 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr22-2729 chr22 38752859 38753069 + 13.2 0.000 intron (NM_001199579, intron 1 of 17) intron (NM_001199579, intron 1 of 17) 2502 NM_001199580 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr7-3671 chr7 46577261 46577471 + 13.2 0.000 Intergenic Intergenic 119756 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr10-2220 chr10 68432937 68433147 + 13.2 0.000 intron (NM_001080449, intron 10 of 20) L2|LINE|L2 -25748 NM_001042417 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr16-1480 chr16 1449828 1450038 + 13.2 0.000 intron (NM_001287, intron 17 of 24) intron (NM_001287, intron 17 of 24) -5444 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr11-6155 chr11 43736703 43736913 + 13.2 0.000 intron (NM_016142, intron 1 of 10) intron (NM_016142, intron 1 of 10) 56070 NM_016142 51144 Hs.132513 NM_016142 ENSG00000149084 HSD17B12 KAR|SDR12C1 hydroxysteroid 17-beta dehydrogenase 12 protein-coding chr2-8820 chr2 169514459 169514669 + 13.2 0.000 intron (NM_006063, intron 1 of 5) intron (NM_006063, intron 1 of 5) 4862 NM_006063 10324 Hs.50550 NM_006063 ENSG00000239474 KLHL41 KBTBD10|Krp1|SARCOSIN kelch like family member 41 protein-coding chr16-3219 chr16 85563381 85563591 + 13.2 0.000 Intergenic Intergenic -47923 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chrX-511 chrX 115023164 115023374 + 13.2 0.000 Intergenic Intergenic -5653 NM_000640 3598 Hs.336046 NM_000640 ENSG00000123496 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor subunit alpha 2 protein-coding chr22-3015 chr22 23010702 23010912 + 13.2 0.000 Intergenic Intergenic -59712 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr4-891 chr4 7761799 7762009 + 13.2 0.000 3' UTR (NM_001371090, exon 16 of 16) 3' UTR (NM_001371090, exon 16 of 16) 7814 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr14-2091 chr14 72315618 72315828 + 13.2 0.000 intron (NM_001370288, intron 2 of 16) MIRb|SINE|MIR -201097 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr1-4574 chr1 92357063 92357273 + 13.2 0.000 intron (NM_024813, intron 11 of 12) L2b|LINE|L2 58109 NM_024813 79871 Hs.444421 NM_024813 ENSG00000122484 RPAP2 C1orf82|Rtr1 RNA polymerase II associated protein 2 protein-coding chr17-2653 chr17 21034959 21035169 + 13.2 0.000 intron (NM_015276, intron 1 of 12) intron (NM_015276, intron 1 of 12) 7947 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding chr14-1326 chr14 72682662 72682872 + 13.2 0.000 intron (NM_001280544, intron 7 of 9) intron (NM_001280544, intron 7 of 9) 165947 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chrX-430 chrX 46325625 46325835 + 13.2 0.000 TTS (NR_110388) TTS (NR_110388) 1944 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr19-1127 chr19 2069813 2070023 + 13.2 0.000 Intergenic Intergenic -18674 NM_199054 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr9-1098 chr9 133864016 133864226 + 13.2 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) -124166 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr19-2713 chr19 29610539 29610749 + 13.2 0.000 intron (NM_006627, intron 3 of 6) intron (NM_006627, intron 3 of 6) 4361 NM_006627 10775 Hs.412870 NM_006627 ENSG00000105171 POP4 RPP29 POP4 homolog, ribonuclease P/MRP subunit protein-coding chr6-4267 chr6 10859157 10859367 + 13.2 0.000 Intergenic Intergenic -20707 NM_001242385 4117 Hs.446125 NM_005906 ENSG00000111837 MAK RP62 male germ cell associated kinase protein-coding chr22-2923 chr22 46795749 46795959 + 13.2 0.000 intron (NM_001284303, intron 2 of 10) intron (NM_001284303, intron 2 of 10) 21927 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chrX-1266 chrX 106954954 106955164 + 13.2 0.000 exon (NM_024657, exon 14 of 17) exon (NM_024657, exon 14 of 17) 34657 NM_020384 9075 Hs.522746 NM_020384 ENSG00000165376 CLDN2 - claudin 2 protein-coding chr5-4760 chr5 53041422 53041632 + 13.2 0.000 intron (NR_073106, intron 2 of 29) MIR|SINE|MIR 52175 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr1-2903 chr1 9467325 9467535 + 13.2 0.000 Intergenic Intergenic -38434 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr9-1777 chr9 134888192 134888402 + 13.2 0.000 TTS (NM_015837) TTS (NM_015837) 7485 NM_015837 2220 Hs.54517 NM_004108 ENSG00000160339 FCN2 EBP-37|FCNL|P35|ficolin-2 ficolin 2 protein-coding chr3-2763 chr3 150737999 150738209 + 13.2 0.000 intron (NR_121657, intron 1 of 2) intron (NR_121657, intron 1 of 2) 881 NR_121657 101928105 NR_121657 LOC101928105 - uncharacterized LOC101928105 ncRNA chr2-2268 chr2 12070711 12070921 + 13.2 0.000 intron (NR_110196, intron 2 of 5) intron (NR_110196, intron 2 of 5) 63700 NR_110196 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr6-2363 chr6 134827238 134827448 + 13.2 0.000 Intergenic Intergenic 122758 NM_170771 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding chr6-741 chr6 15245782 15245992 + 13.2 0.000 promoter-TSS (NM_004973) promoter-TSS (NM_004973) -182 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr18-2215 chr18 64329188 64329398 + 13.2 0.000 intron (NR_033881, intron 5 of 9) intron (NR_033881, intron 5 of 9) -69238 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr3-2841 chr3 25961113 25961323 + 13.2 0.000 Intergenic LTR33|LTR|ERVL -87523 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr20-760 chr20 35871126 35871336 + 13.2 0.000 intron (NM_016436, intron 8 of 17) intron (NM_016436, intron 8 of 17) 83395 NM_033630 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding chr6-1216 chr6 72465072 72465282 + 13.2 0.000 Intergenic Intergenic 98431 NM_001168411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr7-3056 chr7 134796894 134797104 + 13.2 0.000 intron (NM_033157, intron 1 of 14) intron (NM_033157, intron 1 of 14) 17365 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr14-3464 chr14 101164429 101164639 + 13.2 0.000 Intergenic L1MC3|LINE|L1 43678 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr17-1792 chr17 78873871 78874081 + 13.2 0.000 intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 29225 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr1-10237 chr1 116336389 116336599 + 13.2 0.000 Intergenic Intergenic -36750 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr17-1743 chr17 840793 841003 + 13.2 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 23213 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr9-2439 chr9 2053864 2054074 + 13.2 0.000 intron (NM_001289397, intron 5 of 32) intron (NM_001289397, intron 5 of 32) 32024 NM_001289396 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr3-5274 chr3 117348647 117348857 + 13.2 0.000 Intergenic Intergenic 342173 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr1-6068 chr1 94542911 94543121 + 13.2 0.000 promoter-TSS (NR_162147) promoter-TSS (NR_162147) -686 NR_162147 113219466 NR_162147 MIR12133 - microRNA 12133 ncRNA chr6-5172 chr6 128807643 128807853 + 13.2 0.000 Intergenic Intergenic -75390 NM_001079823 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr21-262 chr21 44802592 44802802 + 13.2 0.000 promoter-TSS (NM_001202489) promoter-TSS (NM_001202489) 456 NR_109928 101928689 Hs.116142 NR_109928 LINC01424 - long intergenic non-protein coding RNA 1424 ncRNA chr12-1421 chr12 52280859 52281069 + 13.2 0.000 intron (NM_001320198, intron 2 of 10) intron (NM_001320198, intron 2 of 10) 6319 NM_001320198 3892 Hs.278658 NM_002284 ENSG00000170442 KRT86 HB6|Hb1|K86|KRTHB1|KRTHB6|MNX keratin 86 protein-coding chr12-2436 chr12 51793210 51793420 + 13.2 0.000 intron (NM_001369788, intron 24 of 25) L2a|LINE|L2 38602 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chr17-2059 chr17 59668920 59669130 + 13.2 0.000 intron (NM_001288653, intron 14 of 31) intron (NM_001288653, intron 14 of 31) 38573 NM_001015509 51651 Hs.12677 NM_016077 ENSG00000141378 PTRH2 BIT1|CFAP37|CGI-147|IMNEPD|PTH|PTH 2|PTH2 peptidyl-tRNA hydrolase 2 protein-coding chr12-1121 chr12 52259886 52260096 + 13.2 0.000 Intergenic Intergenic -1483 NR_146088 85349 Hs.584773 NR_146088 ENSG00000135477 KRT87P HBD|KRT121P|KRTHBP4|psihHbD keratin 87 pseudogene pseudo chr12-5147 chr12 100397344 100397554 + 13.2 0.000 intron (NM_001145288, intron 5 of 10) intron (NM_001145288, intron 5 of 10) 40375 NM_001145288 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr22-1856 chr22 38629245 38629455 + 13.2 0.000 intron (NM_001013647, intron 6 of 16) intron (NM_001013647, intron 6 of 16) 27042 NM_001013647 646851 Hs.542707 NM_001013647 ENSG00000184949 FAM227A - family with sequence similarity 227 member A protein-coding chr10-4292 chr10 12741271 12741481 + 13.2 0.000 intron (NM_001351032, intron 5 of 11) intron (NM_001351032, intron 5 of 11) -16023 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr10-5420 chr10 77199652 77199862 + 13.2 0.000 intron (NM_001271519, intron 3 of 28) intron (NM_001271519, intron 3 of 28) 58926 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr12-1366 chr12 50575085 50575295 + 13.2 0.000 intron (NM_173602, intron 1 of 37) L2|LINE|L2 70205 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr4-731 chr4 4859460 4859670 + 13.2 0.000 promoter-TSS (NM_002448) promoter-TSS (NM_002448) -100 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr12-998 chr12 123519561 123519771 + 13.2 0.000 intron (NM_001319302, intron 2 of 7) intron (NM_001319302, intron 2 of 7) 560 NM_001319244 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr6-1660 chr6 154638444 154638654 + 13.2 0.000 Intergenic Intergenic -94829 NM_001286189 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr19-4864 chr19 39279320 39279530 + 13.2 0.000 Intergenic L1MD2|LINE|L1 10908 NM_172138 282616 Hs.567792 NM_172138 ENSG00000183709 IFNL2 IL-28A|IL28A interferon lambda 2 protein-coding chr11-5723 chr11 2265431 2265641 + 13.2 0.000 Intergenic Intergenic 5416 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr7-1837 chr7 134620009 134620219 + 13.2 0.000 Intergenic Intergenic -26665 NM_199186 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr2-5566 chr2 169680264 169680474 + 13.2 0.000 intron (NM_001085447, intron 2 of 8) L1ME1|LINE|L1 14036 NM_001085447 129881 Hs.370111 NM_001085447 ENSG00000154479 CCDC173 C2orf77 coiled-coil domain containing 173 protein-coding chr10-1345 chr10 108802102 108802312 + 13.2 0.000 Intergenic Intergenic -732914 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr5-2113 chr5 63570291 63570501 + 13.2 0.000 Intergenic LTR27E|LTR|ERV1 391896 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr11-3710 chr11 10657325 10657535 + 13.2 0.000 intron (NM_130385, intron 1 of 20) intron (NM_130385, intron 1 of 20) -5129 NM_001098579 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr16-2512 chr16 90013385 90013595 + 13.2 0.000 intron (NM_001288708, intron 1 of 4) MIR|SINE|MIR -3369 NM_024043 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr6-1439 chr6 157241439 157241649 + 13.2 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 82715 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr20-820 chr20 62314427 62314637 + 13.2 0.000 intron (NM_005560, intron 61 of 79) intron (NM_005560, intron 61 of 79) 11535 NM_007002 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr9-4181 chr9 25548806 25549016 + 13.2 0.000 Intergenic Intergenic 129947 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr1-3045 chr1 6889983 6890193 + 13.2 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 104634 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr1-2566 chr1 24955182 24955392 + 13.2 0.000 intron (NM_001320672, intron 2 of 6) intron (NM_001320672, intron 2 of 6) 9723 NM_001320672 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr3-5043 chr3 37712211 37712421 + 13.2 0.000 intron (NM_002207, intron 18 of 27) intron (NM_002207, intron 18 of 27) 149464 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr16-2916 chr16 1392128 1392338 + 13.2 0.000 intron (NR_160278, intron 8 of 15) MER34A|LTR|ERV1 -12581 NM_001276414 64718 Hs.643536 NM_001037125 ENSG00000059145 UNKL C16orf28|ZC3H5L|ZC3HDC5L unk like zinc finger protein-coding chr5-569 chr5 91280548 91280758 + 13.2 0.000 Intergenic CpG 33749 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr2-3922 chr2 54845642 54845852 + 13.2 0.000 intron (NM_001039753, intron 7 of 40) intron (NM_001039753, intron 7 of 40) 120735 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr13-930 chr13 76286463 76286673 + 13.2 0.000 Intergenic Intergenic -351436 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr3-1109 chr3 58585251 58585461 + 13.2 0.000 intron (NM_001282714, intron 2 of 4) intron (NM_001282714, intron 2 of 4) 1658 NM_001282713 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr17-1524 chr17 68102479 68102689 + 13.2 0.000 intron (NR_027418, intron 1 of 5) intron (NR_027418, intron 1 of 5) 1029 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr3-1694 chr3 31763022 31763232 + 13.2 0.000 intron (NM_001174060, intron 3 of 10) intron (NM_001174060, intron 3 of 10) 58914 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA chr5-1091 chr5 77133169 77133379 + 13.2 0.000 intron (NR_024398, intron 3 of 3) MLT1H2|LTR|ERVL-MaLR -45989 NM_032367 84327 Hs.584988 NM_032367 ENSG00000132846 ZBED3 - zinc finger BED-type containing 3 protein-coding chr5-5150 chr5 107809667 107809877 + 13.2 0.000 Intergenic Intergenic -138835 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr21-469 chr21 43703757 43703967 + 13.2 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -15267 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr15-1539 chr15 65175669 65175879 + 13.2 0.000 intron (NM_006660, intron 3 of 13) intron (NM_006660, intron 3 of 13) 9568 NR_133680 10845 Hs.113823 NM_006660 ENSG00000166855 CLPX EPP2 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding chr17-4289 chr17 76039277 76039487 + 13.2 0.000 non-coding (NR_048541, exon 15 of 15) non-coding (NR_048541, exon 15 of 15) -12076 NM_001988 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr3-4088 chr3 102374019 102374229 + 13.2 0.000 Intergenic Intergenic -60891 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr7-2340 chr7 923176 923386 + 13.2 0.000 intron (NM_006869, intron 3 of 10) intron (NM_006869, intron 3 of 10) -2392 NM_001284311 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr18-913 chr18 61420586 61420796 + 13.2 0.000 intron (NM_031891, intron 1 of 11) intron (NM_031891, intron 1 of 11) 87261 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr1-7231 chr1 224770011 224770221 + 13.2 0.000 Intergenic Intergenic 153799 NM_152495 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr12-4938 chr12 69448301 69448511 + 13.2 0.000 Intergenic L2|LINE|L2 -21982 NM_001042555 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding chr2-7947 chr2 61564191 61564401 + 13.2 0.000 Intergenic Intergenic -25940 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr2-2786 chr2 10774078 10774288 + 13.2 0.000 intron (NM_001039362, intron 8 of 13) intron (NM_001039362, intron 8 of 13) 38602 NM_005742 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr14-845 chr14 102593518 102593728 + 13.2 0.000 intron (NM_015156, intron 2 of 11) CpG-7681 974 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr8-3164 chr8 94451017 94451227 + 13.2 0.000 intron (NM_001205262, intron 3 of 3) L1MC4|LINE|L1 -14178 NM_001205263 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr6-1340 chr6 36160390 36160600 + 13.2 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 29982 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr9-2982 chr9 35341584 35341794 + 13.2 0.000 promoter-TSS (NM_001371187) promoter-TSS (NM_001371187) -207 NM_001371187 chr9-1536 chr9 132079841 132080051 + 13.2 0.000 promoter-TSS (NM_004269) promoter-TSS (NM_004269) -79 NM_004269 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr5-5696 chr5 164081078 164081288 + 13.2 0.000 Intergenic MER21C|LTR|ERVL 386219 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr10-1000 chr10 91633060 91633270 + 13.2 0.000 promoter-TSS (NM_005398) promoter-TSS (NM_005398) -94 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chr13-2123 chr13 92671686 92671896 + 13.2 0.000 intron (NM_004466, intron 7 of 7) intron (NM_004466, intron 7 of 7) 48164 NR_049776 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA chr12-3365 chr12 95663715 95663925 + 13.2 0.000 intron (NM_001329701, intron 9 of 9) intron (NM_001329701, intron 9 of 9) 14565 NR_077225 100132594 Hs.676211 NR_077225 ENSG00000257150 PGAM1P5 - phosphoglycerate mutase 1 pseudogene 5 pseudo chr10-1753 chr10 14876964 14877174 + 13.2 0.000 Intergenic L2|LINE|L2 -1714 NR_034181 79723 Hs.554883 NM_024670 ENSG00000152455 SUV39H2 KMT1B suppressor of variegation 3-9 homolog 2 protein-coding chr5-2300 chr5 55064392 55064602 + 13.2 0.000 Intergenic Intergenic -38149 NM_006144 3001 Hs.90708 NM_006144 ENSG00000145649 GZMA CTLA3|HFSP granzyme A protein-coding chr5-940 chr5 43281321 43281531 + 13.2 0.000 TTS (NM_153361) TTS (NM_153361) 31755 NM_001330663 3157 Hs.397729 NM_002130 ENSG00000112972 HMGCS1 HMGCS 3-hydroxy-3-methylglutaryl-CoA synthase 1 protein-coding chr2-4281 chr2 231861069 231861279 + 13.2 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 31124 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr8-4666 chr8 137181127 137181337 + 13.2 0.000 Intergenic Intergenic 232356 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr10-1504 chr10 15294448 15294658 + 13.2 0.000 intron (NM_001010924, intron 1 of 7) intron (NM_001010924, intron 1 of 7) 76736 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr8-1562 chr8 122689742 122689952 + 13.2 0.000 intron (NR_126348, intron 2 of 3) intron (NR_126348, intron 2 of 3) 4259 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr10-3302 chr10 924956 925166 + 13.2 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 6644 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr10-2086 chr10 112013370 112013580 + 13.2 0.000 Intergenic Intergenic 170290 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr11-1672 chr11 13316414 13316624 + 13.2 0.000 intron (NM_001351822, intron 2 of 18) intron (NM_001351822, intron 2 of 18) 38792 NM_001351822 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr18-1582 chr18 36692448 36692658 + 13.2 0.000 intron (NM_001281740, intron 16 of 28) intron (NM_001281740, intron 16 of 28) -29135 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr4-773 chr4 86934765 86934975 + 13.2 0.000 promoter-TSS (NM_001166693) promoter-TSS (NM_001166693) -20 NR_038841 100506746 Hs.657766 NR_038841 AFF1-AS1 - AFF1 antisense RNA 1 ncRNA chr16-1200 chr16 30621873 30622083 + 13.2 0.000 Intergenic HERVK3-int|LTR|ERVK -11203 NR_073481 115509 Hs.454685 NM_138447 ENSG00000156853 ZNF689 TIPUH1 zinc finger protein 689 protein-coding chr4-2253 chr4 162343147 162343357 + 13.2 0.000 Intergenic THE1B|LTR|ERVL-MaLR -179218 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr10-974 chr10 102431939 102432149 + 13.2 0.000 intron (NM_024040, intron 1 of 8) intron (NM_024040, intron 1 of 8) 530 NM_024040 79004 Hs.500874 NM_024040 ENSG00000107874 CUEDC2 C10orf66|bA18I14.5 CUE domain containing 2 protein-coding chr10-3118 chr10 33291381 33291591 + 13.2 0.000 intron (NM_001244973, intron 2 of 16) intron (NM_001244973, intron 2 of 16) 43181 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr16-1428 chr16 46380821 46381031 + 13.2 0.000 Intergenic Intergenic 188171 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr2-2556 chr2 218029313 218029523 + 13.2 0.000 Intergenic L1ME3A|LINE|L1 -5516 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr19-985 chr19 10502711 10502921 + 13.2 0.000 promoter-TSS (NM_012289) promoter-TSS (NM_012289) -45 NM_012289 9817 Hs.465870 NM_012289 ENSG00000079999 KEAP1 INrf2|KLHL19 kelch like ECH associated protein 1 protein-coding chr7-2503 chr7 31488609 31488819 + 13.2 0.000 Intergenic Intergenic -25357 NM_001257967 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr7-1570 chr7 76314396 76314606 + 13.2 0.000 Intergenic Intergenic 11828 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr10-4364 chr10 34773558 34773768 + 13.2 0.000 intron (NM_001184789, intron 1 of 22) L1ME4c|LINE|L1 41633 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr13-928 chr13 75645254 75645464 + 13.2 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 9029 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr4-1467 chr4 184688461 184688671 + 13.2 0.000 intron (NR_144313, intron 10 of 12) LTR80A|LTR|ERVL 38828 NR_144312 201973 Hs.481307 NM_152683 ENSG00000164306 PRIMPOL CCDC111|MYP22|Primpol1 primase and DNA directed polymerase protein-coding chr13-625 chr13 45440493 45440703 + 13.2 0.000 Intergenic Intergenic -22143 NM_001286806 253512 Hs.591230 NM_001010875 ENSG00000174032 SLC25A30 KMCP1 solute carrier family 25 member 30 protein-coding chr15-1102 chr15 72228701 72228911 + 13.2 0.000 intron (NM_001206798, intron 1 of 10) intron (NM_001206798, intron 1 of 10) 1105 NM_001206799 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr10-3188 chr10 90775525 90775735 + 13.2 0.000 intron (NM_019860, intron 1 of 2) L2a|LINE|L2 82409 NM_019860 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr1-1823 chr1 229759131 229759341 + 13.2 0.000 Intergenic MLT2F|LTR|ERVL 126582 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr1-4119 chr1 245263794 245264004 + 13.2 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) -29382 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr2-2740 chr2 158970069 158970279 + 13.2 0.000 intron (NM_001350065, intron 1 of 27) intron (NM_001350065, intron 1 of 27) 1534 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr18-410 chr18 36157447 36157657 + 13.2 0.000 intron (NR_040110, intron 13 of 21) intron (NR_040110, intron 13 of 21) 27653 NM_001242877 55250 Hs.8739 NM_018255 ENSG00000134759 ELP2 MRT58|SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding chr17-4646 chr17 15947590 15947800 + 13.2 0.000 intron (NM_000676, intron 1 of 1) intron (NM_000676, intron 1 of 1) 2778 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr7-2370 chr7 22814758 22814968 + 13.2 0.000 intron (NM_019059, intron 2 of 2) intron (NM_019059, intron 2 of 2) 7986 NM_019059 54543 Hs.112318 NM_019059 ENSG00000196683 TOMM7 TOM7 translocase of outer mitochondrial membrane 7 protein-coding chr16-1210 chr16 65336147 65336357 + 13.2 0.000 intron (NR_027755, intron 7 of 8) intron (NR_027755, intron 7 of 8) -159679 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chrX-1605 chrX 102561146 102561356 + 13.2 0.000 intron (NR_002216, intron 1 of 16) intron (NR_002216, intron 1 of 16) 11286 NR_002216 55999 Hs.454283 NR_002216 ENSG00000196970 NXF4 - nuclear RNA export factor 4 pseudogene pseudo chr8-1000 chr8 131906510 131906720 + 13.2 0.000 intron (NM_001323555, intron 1 of 22) intron (NM_001323555, intron 1 of 22) 2522 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr16-2169 chr16 67385589 67385799 + 13.2 0.000 TTS (NM_001161575) TTS (NM_001161575) 7804 NM_015964 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr5-2007 chr5 10707916 10708126 + 13.2 0.000 intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 53213 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr2-7483 chr2 17195754 17195964 + 13.2 0.000 Intergenic Intergenic 322581 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr2-3397 chr2 32812505 32812715 + 13.2 0.000 exon (NM_001193509, exon 18 of 20) exon (NM_001193509, exon 18 of 20) -12823 NR_027099 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr1-2206 chr1 84298480 84298690 + 13.2 0.000 promoter-TSS (NM_001010971) promoter-TSS (NM_001010971) 47 NM_001010971 148418 Hs.591445 NM_001010971 ENSG00000203943 SAMD13 HSD-41|HSD-42 sterile alpha motif domain containing 13 protein-coding chr6-5340 chr6 146313806 146314016 + 13.2 0.000 intron (NM_001278065, intron 4 of 9) L1ME1|LINE|L1 -229922 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr16-3160 chr16 78460512 78460722 + 13.2 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 360963 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr4-2000 chr4 1075518 1075728 + 13.2 0.000 intron (NR_159499, intron 2 of 3) MSTA|LTR|ERVL-MaLR 37941 NM_194439 285498 Hs.248290 NM_194439 ENSG00000178222 RNF212 ZHP3 ring finger protein 212 protein-coding chr13-1442 chr13 60309640 60309850 + 13.2 0.000 Intergenic Intergenic -41641 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chrX-765 chrX 24341769 24341979 + 13.2 0.000 Intergenic Intergenic -20809 NM_001136234 100130302 Hs.717243 NM_001136234 SUPT20HL1 FAM48B1|SPT20L SUPT20H like 1 protein-coding chr8-1992 chr8 86391689 86391899 + 13.2 0.000 intron (NM_007013, intron 5 of 24) MER67B|LTR|ERV1 49247 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr1-3671 chr1 153671460 153671670 + 13.2 0.000 promoter-TSS (NM_001267809) promoter-TSS (NM_001267809) -537 NM_001267809 3608 Hs.75117 NM_004515 ENSG00000143621 ILF2 NF45|PRO3063 interleukin enhancer binding factor 2 protein-coding chr7-2635 chr7 1804987 1805197 + 13.2 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 39161 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr1-4552 chr1 66231170 66231380 + 13.2 0.000 intron (NM_001037340, intron 1 of 14) intron (NM_001037340, intron 1 of 14) -100833 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr19-3157 chr19 35033342 35033552 + 13.2 0.000 intron (NM_001321605, intron 2 of 5) intron (NM_001321605, intron 2 of 5) 2176 NM_001321605 6324 Hs.436646 NM_001037 ENSG00000105711 SCN1B ATFB13|BRGDA5|EIEE52|GEFSP1 sodium voltage-gated channel beta subunit 1 protein-coding chrX-1480 chrX 131645642 131645852 + 13.2 0.000 Intergenic Intergenic 101673 NM_001004486 347468 Hs.553711 NM_001004486 ENSG00000171054 OR13H1 ORX1 olfactory receptor family 13 subfamily H member 1 protein-coding chr19-3257 chr19 2046102 2046312 + 13.2 0.000 exon (NM_017572, exon 5 of 14) exon (NM_017572, exon 5 of 14) 5037 NM_017572 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr6-2096 chr6 156883509 156883719 + 13.2 0.000 intron (NM_020732, intron 3 of 19) intron (NM_020732, intron 3 of 19) -103883 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr12-3438 chr12 111757366 111757576 + 13.2 0.000 TTS (NM_001136538) TTS (NM_001136538) -9462 NM_000690 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr10-2624 chr10 83101487 83101697 + 13.2 0.000 Intergenic Intergenic 575497 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr4-1618 chr4 71396336 71396546 + 13.2 0.000 intron (NM_003759, intron 3 of 22) intron (NM_003759, intron 3 of 22) 57388 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr9-2853 chr9 128336063 128336273 + 13.2 0.000 Intergenic Intergenic -4359 NM_005094 10999 Hs.656699 NM_005094 ENSG00000167114 SLC27A4 ACSVL4|FATP4|IPS solute carrier family 27 member 4 protein-coding chr1-2740 chr1 28882116 28882326 + 13.2 0.000 Intergenic Intergenic -4870 NM_203342 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr2-8026 chr2 70350799 70351009 + 13.2 0.000 Intergenic L1MA9|LINE|L1 -48837 NM_001329753 84908 Hs.516077 NM_032822 ENSG00000035141 FAM136A - family with sequence similarity 136 member A protein-coding chr5-5277 chr5 122649330 122649540 + 13.2 0.000 intron (NR_109881, intron 8 of 11) AluSz|SINE|Alu -64835 NR_134281 101927357 Hs.639856 NR_134281 LOC101927357 - uncharacterized LOC101927357 ncRNA chr15-2778 chr15 33693352 33693562 + 13.2 0.000 intron (NM_001243996, intron 38 of 102) intron (NM_001243996, intron 38 of 102) -275040 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr2-1700 chr2 174486040 174486250 + 13.2 0.000 intron (NM_001033045, intron 1 of 16) intron (NM_001033045, intron 1 of 16) 884 NM_152529 151556 Hs.516604 NM_152529 ENSG00000163328 GPR155 DEP.7|DEPDC3|PGR22 G protein-coupled receptor 155 protein-coding chr17-2374 chr17 75825480 75825690 + 13.2 0.000 3' UTR (NM_001080419, exon 16 of 16) 3' UTR (NM_001080419, exon 16 of 16) 19132 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr15-1139 chr15 56045129 56045339 + 13.2 0.000 Intergenic Intergenic -51622 NM_001329212 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr14-1032 chr14 68365363 68365573 + 13.2 0.000 intron (NM_133509, intron 8 of 10) intron (NM_133509, intron 8 of 10) 263319 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr6-2516 chr6 156028870 156029080 + 13.2 0.000 Intergenic Intergenic 82178 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr16-1456 chr16 84365935 84366145 + 13.2 0.000 Intergenic Intergenic -2483 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr12-1376 chr12 63844629 63844839 + 13.2 0.000 promoter-TSS (NM_020762) promoter-TSS (NM_020762) 34 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr7-769 chr7 32942648 32942858 + 13.2 0.000 intron (NR_003500, intron 1 of 5) CpG 417 NR_003500 441212 Hs.648086 NM_001039754 ENSG00000205763 RP9P - RP9 pseudogene pseudo chr17-2150 chr17 42775695 42775905 + 13.2 0.000 intron (NM_032353, intron 4 of 5) intron (NM_032353, intron 4 of 5) 2351 NM_032353 84313 Hs.500165 NM_032353 ENSG00000131475 VPS25 DERP9|EAP20|FAP20 vacuolar protein sorting 25 homolog protein-coding chr13-1658 chr13 72360220 72360430 + 13.2 0.000 Intergenic Intergenic 367304 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr3-6949 chr3 161578467 161578677 + 13.2 0.000 Intergenic Intergenic 81764 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr11-2879 chr11 35364280 35364490 + 13.2 0.000 intron (NM_001195728, intron 1 of 11) intron (NM_001195728, intron 1 of 11) 55173 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr15-2950 chr15 48695876 48696086 + 13.2 0.000 Intergenic Intergenic -50193 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr17-3038 chr17 79231194 79231404 + 13.2 0.000 intron (NM_001350453, intron 3 of 13) L1ME1|LINE|L1 156362 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr2-2098 chr2 239106398 239106608 + 13.2 0.000 intron (NM_006037, intron 15 of 26) intron (NM_006037, intron 15 of 26) -20577 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr11-958 chr11 64965863 64966073 + 13.2 0.000 intron (NM_001037225, intron 1 of 10) AluY|SINE|Alu 6123 NM_001300803 283129 Hs.567793 NM_001037225 ENSG00000168070 MAJIN C11orf85 membrane anchored junction protein protein-coding chr2-5488 chr2 136115052 136115262 + 13.2 0.000 exon (NM_001348059, exon 3 of 3) exon (NM_001348059, exon 3 of 3) 1078 NM_001008540 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr6-4023 chr6 124693012 124693222 + 13.2 0.000 intron (NM_001040214, intron 4 of 6) intron (NM_001040214, intron 4 of 6) -269428 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr4-1637 chr4 87061187 87061397 + 13.2 0.000 intron (NM_005935, intron 3 of 19) intron (NM_005935, intron 3 of 19) 54291 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr10-1334 chr10 99330068 99330278 + 13.2 0.000 exon (NM_001345887, exon 1 of 12) exon (NM_001345887, exon 1 of 12) 817 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr11-1865 chr11 121381220 121381430 + 13.2 0.000 Intergenic L1PBa|LINE|L1 -70989 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr1-2796 chr1 1593985 1594195 + 13.2 0.000 Intergenic Intergenic -5343 NR_147951 105378586 Hs.633349 NR_147951 LOC105378586 - uncharacterized LOC105378586 ncRNA chr2-7662 chr2 28885383 28885593 + 13.2 0.000 Intergenic Intergenic -9179 NM_015131 23160 Hs.622982 NM_015131 ENSG00000163811 WDR43 NET12|UTP5 WD repeat domain 43 protein-coding chr4-2439 chr4 153067583 153067793 + 13.2 0.000 Intergenic Intergenic -84646 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chrX-535 chrX 104210512 104210722 + 13.2 0.000 Intergenic L2a|LINE|L2 44164 NM_207318 139231 Hs.496535 NM_207318 ENSG00000123575 FAM199X CXorf39 family with sequence similarity 199, X-linked protein-coding chr2-3896 chr2 45119855 45120065 + 13.2 0.000 Intergenic Intergenic -110508 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr14-813 chr14 99995836 99996046 + 13.2 0.000 intron (NM_001330221, intron 1 of 13) intron (NM_001330221, intron 1 of 13) 24519 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr4-550 chr4 3466328 3466538 + 13.2 0.000 intron (NM_001363811, intron 2 of 7) intron (NM_001363811, intron 2 of 7) 3127 NM_001301071 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr4-4914 chr4 123235268 123235478 + 13.2 0.000 intron (NM_001345856, intron 14 of 15) Charlie7a|DNA|hAT-Charlie -161422 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr14-1225 chr14 92600374 92600584 + 13.2 0.000 intron (NM_024832, intron 3 of 9) intron (NM_024832, intron 3 of 9) 24245 NM_001319987 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr16-816 chr16 66608566 66608776 + 13.2 0.000 intron (NM_181553, intron 2 of 4) intron (NM_181553, intron 2 of 4) 3940 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr8-2078 chr8 126588631 126588841 + 13.2 0.000 Intergenic Intergenic -30258 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr1-2924 chr1 32339579 32339789 + 13.2 0.000 Intergenic MIR3|SINE|MIR -3451 NR_052852 65108 Hs.75061 NM_023009 ENSG00000175130 MARCKSL1 F52|MACMARCKS|MLP|MLP1|MRP MARCKS like 1 protein-coding chr15-1862 chr15 59414401 59414611 + 13.2 0.000 Intergenic MER34A|LTR|ERV1 -23680 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding chr11-2937 chr11 72145353 72145563 + 13.2 0.000 Intergenic Intergenic 9733 NM_001318045 2352 Hs.352 NM_000804 ENSG00000110203 FOLR3 FR-G|FR-gamma|FRgamma|gamma-hFR folate receptor gamma protein-coding chr14-1486 chr14 34197808 34198018 + 13.2 0.000 Intergenic Intergenic -246839 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr3-4810 chr3 129988784 129988994 + 13.2 0.000 Intergenic AluJb|SINE|Alu 14169 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr12-6279 chr12 48189543 48189753 + 13.2 0.000 Intergenic Intergenic 6004 NM_001013635 387856 Hs.251699 NM_001013635 ENSG00000177875 CCDC184 C12orf68 coiled-coil domain containing 184 protein-coding chr13-1111 chr13 20107745 20107955 + 13.2 0.000 Intergenic L1MEd|LINE|L1 5149 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr1-6080 chr1 103612167 103612377 + 13.2 0.000 Intergenic L2|LINE|L2 -5060 NM_000699 279 Hs.654437 NM_000699 ENSG00000243480 AMY2A AMY2|PA amylase alpha 2A (pancreatic) protein-coding chr10-2190 chr10 21715790 21716000 + 13.2 0.000 intron (NM_001195626, intron 14 of 22) intron (NM_001195626, intron 14 of 22) 181723 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr17-1874 chr17 43124554 43124764 + 13.2 0.000 promoter-TSS (NM_007298) promoter-TSS (NM_007298) -544 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr8-1821 chr8 124181505 124181715 + 13.2 0.000 Intergenic LTR24|LTR|ERV1 -10088 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr9-5306 chr9 85904032 85904242 + 13.2 0.000 Intergenic Intergenic -37005 NM_001321881 60560 Hs.436098 NM_021929 ENSG00000135040 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding chr17-3334 chr17 75270145 75270355 + 13.2 0.000 promoter-TSS (NM_001242500) promoter-TSS (NM_001242500) -5 NM_001242500 57409 Hs.325631 NM_020679 ENSG00000125457 MIF4GD AD023|MIFD|SLIP1 MIF4G domain containing protein-coding chr5-1844 chr5 112918666 112918876 + 13.2 0.000 intron (NM_005669, intron 2 of 4) L2|LINE|L2 3456 NM_005669 7905 Hs.429608 NM_005669 ENSG00000129625 REEP5 C5orf18|D5S346|DP1|TB2|YOP1|Yip2e receptor accessory protein 5 protein-coding chr5-6748 chr5 79508549 79508759 + 13.2 0.000 intron (NM_001277078, intron 1 of 5) L2c|LINE|L2 5182 NM_001277077 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr10-3169 chr10 79104714 79104924 + 13.2 0.000 intron (NM_020338, intron 1 of 24) intron (NM_020338, intron 1 of 24) 35853 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr15-189 chr15 80153031 80153241 + 13.2 0.000 intron (NM_000137, intron 1 of 13) CpG 137 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr8-638 chr8 52714248 52714458 + 13.2 0.000 promoter-TSS (NM_014781) promoter-TSS (NM_014781) 82 NM_014781 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr18-462 chr18 27413899 27414109 + 13.2 0.000 Intergenic Intergenic -71348 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr10-2788 chr10 132060141 132060351 + 13.2 0.000 Intergenic Intergenic -5700 NM_001323090 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr17-1648 chr17 43646098 43646308 + 13.2 0.000 intron (NM_001040002, intron 2 of 3) CpG 15360 NM_013999 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr1-9377 chr1 30295176 30295386 + 13.2 0.000 Intergenic Intergenic -257669 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chrX-1948 chrX 6213125 6213335 + 13.2 0.000 intron (NM_001282145, intron 1 of 6) L1MC3|LINE|L1 -13128 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr20-768 chr20 40868266 40868476 + 13.2 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -112342 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chrX-649 chrX 70292683 70292893 + 13.2 0.000 intron (NM_012310, intron 3 of 30) intron (NM_012310, intron 3 of 30) 2684 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chr19-1585 chr19 9916492 9916702 + 13.2 0.000 intron (NM_058164, intron 1 of 5) intron (NM_058164, intron 1 of 5) -2796 NM_001304347 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr22-534 chr22 38675050 38675260 + 13.2 0.000 Intergenic Intergenic -6802 NM_020243 56993 Hs.595072 NM_020243 ENSG00000100216 TOMM22 1C9-2|MST065|MSTP065|TOM22 translocase of outer mitochondrial membrane 22 protein-coding chr15-1161 chr15 74956928 74957138 + 13.2 0.000 5' UTR (NM_017793, exon 1 of 1) 5' UTR (NM_017793, exon 1 of 1) 401 NM_017793 54913 Hs.8562 NM_017793 ENSG00000178718 RPP25 - ribonuclease P and MRP subunit p25 protein-coding chr10-1096 chr10 70888068 70888278 + 13.2 0.000 promoter-TSS (NM_001289797) promoter-TSS (NM_001289797) -292 NM_001289797 5092 Hs.3192 NM_000281 ENSG00000166228 PCBD1 DCOH|PCBD|PCD|PHS pterin-4 alpha-carbinolamine dehydratase 1 protein-coding chr9-3105 chr9 37964454 37964664 + 13.2 0.000 intron (NM_003028, intron 3 of 5) MIR3|SINE|MIR -60206 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr22-1256 chr22 23650536 23650746 + 13.2 0.000 intron (NR_024448, intron 11 of 11) AluSq2|SINE|Alu -18320 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr1-1752 chr1 220094032 220094242 + 13.2 0.000 promoter-TSS (NM_018060) promoter-TSS (NM_018060) 5 NM_018060 55699 Hs.262823 NM_018060 ENSG00000067704 IARS2 CAGSSS|ILERS isoleucyl-tRNA synthetase 2, mitochondrial protein-coding chr16-3285 chr16 88838355 88838565 + 13.2 0.000 intron (NM_001323544, intron 5 of 14) intron (NM_001323544, intron 5 of 14) -17760 NR_134671 51693 Hs.461722 NM_016209 ENSG00000167515 TRAPPC2L HSPC176|PERRB trafficking protein particle complex 2 like protein-coding chr7-1827 chr7 127904579 127904789 + 13.2 0.000 intron (NM_014390, intron 13 of 23) intron (NM_014390, intron 13 of 23) -92825 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr7-1463 chr7 99399171 99399381 + 13.2 0.000 intron (NM_014891, intron 4 of 5) intron (NM_014891, intron 4 of 5) 9321 NM_014891 11333 Hs.632296 NM_014891 ENSG00000106244 PDAP1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding chr3-2140 chr3 114400574 114400784 + 13.2 0.000 intron (NM_001348805, intron 7 of 10) intron (NM_001348805, intron 7 of 10) -17037 NM_001164342 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr15-2022 chr15 48680897 48681107 + 13.2 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -35214 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr9-1172 chr9 70563927 70564137 + 13.2 0.000 intron (NM_001366143, intron 21 of 25) intron (NM_001366143, intron 21 of 25) -149375 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr4-1546 chr4 177964020 177964230 + 13.2 0.000 intron (NR_028342, intron 3 of 5) MER5B|DNA|hAT-Charlie -56189 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr14-751 chr14 69093639 69093849 + 13.2 0.000 intron (NM_003861, intron 5 of 8) intron (NM_003861, intron 5 of 8) 58855 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr11-3874 chr11 84558297 84558507 + 13.2 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) 162540 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr16-1079 chr16 58098424 58098634 + 13.2 0.000 Intergenic Intergenic 30852 NM_013242 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr1-5421 chr1 25103293 25103503 + 13.2 0.000 Intergenic Intergenic 79895 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr16-2316 chr16 26827396 26827606 + 13.2 0.000 Intergenic Intergenic -239426 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr11-6804 chr11 92102001 92102211 + 13.2 0.000 Intergenic Intergenic -122928 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr12-2656 chr12 22046269 22046479 + 13.2 0.000 exon (NM_018686, exon 1 of 8) exon (NM_018686, exon 1 of 8) 156 NM_018686 55907 Hs.311346 NM_018686 ENSG00000111726 CMAS CSS cytidine monophosphate N-acetylneuraminic acid synthetase protein-coding chr1-5248 chr1 202295606 202295816 + 13.2 0.000 intron (NM_001017403, intron 6 of 17) intron (NM_001017403, intron 6 of 17) 46225 NM_014176 29089 Hs.5199 NM_014176 ENSG00000077152 UBE2T FANCT|HSPC150|PIG50 ubiquitin conjugating enzyme E2 T protein-coding chr8-1079 chr8 140149595 140149805 + 13.2 0.000 intron (NM_001160372, intron 17 of 22) MIRb|SINE|MIR -49165 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr2-7914 chr2 58064021 58064231 + 13.2 0.000 intron (NM_001288836, intron 3 of 13) Tigger1|DNA|TcMar-Tigger 17414 NM_001130481 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr18-434 chr18 59605947 59606157 + 13.2 0.000 intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) 91371 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr4-1852 chr4 144266399 144266609 + 13.2 0.000 Intergenic Intergenic -125786 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr13-2471 chr13 50823261 50823471 + 13.2 0.000 exon (NM_001306135, exon 2 of 2) exon (NM_001306135, exon 2 of 2) 15511 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr17-1365 chr17 75878716 75878926 + 13.2 0.000 promoter-TSS (NM_033452) promoter-TSS (NM_033452) -240 NM_033452 91107 Hs.293660 NM_033452 ENSG00000132481 TRIM47 GOA|RNF100 tripartite motif containing 47 protein-coding chr1-10049 chr1 90688790 90689000 + 13.2 0.000 Intergenic L2|LINE|L2 28407 NM_020063 343472 Hs.451956 NM_020063 ENSG00000143032 BARHL2 - BarH like homeobox 2 protein-coding chr8-1412 chr8 57406639 57406849 + 13.2 0.000 Intergenic Intergenic 62957 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr2-5203 chr2 39683511 39683721 + 13.2 0.000 intron (NM_152390, intron 1 of 3) intron (NM_152390, intron 1 of 3) 17699 NM_152390 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr13-2087 chr13 73967803 73968013 + 13.2 0.000 intron (NM_007249, intron 2 of 7) Tigger15a|DNA|TcMar-Tigger 166021 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr1-6070 chr1 94921667 94921877 + 13.2 0.000 intron (NM_001839, intron 1 of 6) intron (NM_001839, intron 1 of 6) 4036 NM_001286056 1266 Hs.483454 NM_001839 ENSG00000117519 CNN3 - calponin 3 protein-coding chr12-1371 chr12 53703872 53704082 + 13.2 0.000 Intergenic L3|LINE|CR1 23475 NM_001143682 57658 Hs.156667 NM_020898 ENSG00000012822 CALCOCO1 Cocoa|PP13275|calphoglin calcium binding and coiled-coil domain 1 protein-coding chr3-2718 chr3 80493180 80493390 + 13.2 0.000 Intergenic Intergenic -271612 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr1-3276 chr1 223745808 223746018 + 13.2 0.000 intron (NM_001146068, intron 4 of 20) intron (NM_001146068, intron 4 of 20) 33374 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr11-2505 chr11 67717292 67717502 + 13.2 0.000 Intergenic LTR5A|LTR|ERVK -36173 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr4-1510 chr4 75985155 75985365 + 13.2 0.000 intron (NM_001288984, intron 1 of 21) L2a|LINE|L2 4470 NR_125906 101928809 Hs.637575 NR_125906 ENSG00000245928 LOC101928809 - uncharacterized LOC101928809 ncRNA chr15-2373 chr15 43915986 43916196 + 13.2 0.000 intron (NM_032892, intron 4 of 13) intron (NM_032892, intron 4 of 13) -37920 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr9-1754 chr9 130138141 130138351 + 13.2 0.000 3' UTR (NM_001136557, exon 20 of 20) 3' UTR (NM_001136557, exon 20 of 20) 5973 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr19-1832 chr19 5430765 5430975 + 13.2 0.000 Intergenic AluSx1|SINE|Alu -24547 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr3-2827 chr3 15535946 15536156 + 13.2 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -14345 NM_080539 8292 Hs.146735 NM_005677 ENSG00000206561 COLQ CMS5|EAD collagen like tail subunit of asymmetric acetylcholinesterase protein-coding chr3-4006 chr3 59535967 59536177 + 13.2 0.000 Intergenic Intergenic 122425 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr11-2780 chr11 73223772 73223982 + 13.2 0.000 intron (NM_176071, intron 1 of 2) intron (NM_176071, intron 1 of 2) 5315 NM_176071 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr1-2582 chr1 40902099 40902309 + 13.2 0.000 Intergenic LTR50|LTR|ERVL -39841 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr15-784 chr15 50884739 50884949 + 13.2 0.000 Intergenic Intergenic -23839 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr7-3297 chr7 41763631 41763841 + 13.2 0.000 intron (NR_027118, intron 2 of 3) intron (NR_027118, intron 2 of 3) -60646 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr19-2769 chr19 42519069 42519279 + 13.2 0.000 exon (NM_001205344, exon 5 of 8) exon (NM_001205344, exon 5 of 8) 9307 NM_001184813 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr18-823 chr18 7215979 7216189 + 13.2 0.000 Intergenic AluSx3|SINE|Alu -15020 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr6-3071 chr6 74631630 74631840 + 13.2 0.000 intron (NR_110856, intron 2 of 3) intron (NR_110856, intron 2 of 3) 497047 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr17-2846 chr17 20935808 20936018 + 13.2 0.000 Intergenic Intergenic -2653 NR_160722 339260 Hs.661076 NR_123730 ENSG00000233098 LOC339260 - uncharacterized LOC339260 ncRNA chr3-4026 chr3 66589066 66589276 + 13.2 0.000 Intergenic Intergenic -88750 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chrX-2653 chrX 113604895 113605105 + 13.2 0.000 Intergenic Intergenic 333218 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr18-1249 chr18 54116610 54116820 + 13.2 0.000 Intergenic Intergenic 105697 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr17-4114 chr17 81360405 81360615 + 13.2 0.000 Intergenic L1MD1|LINE|L1 24615 NM_001347841 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr12-2451 chr12 53569160 53569370 + 13.2 0.000 intron (NR_073163, intron 2 of 12) intron (NR_073163, intron 2 of 12) 55281 NR_046221 100652999 Hs.633602 NR_046221 ENSG00000257550 LOC100652999 - uncharacterized LOC100652999 ncRNA chr17-1812 chr17 82288257 82288467 + 13.2 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 4452 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr1-9043 chr1 12401873 12402083 + 13.2 0.000 intron (NM_015378, intron 62 of 69) intron (NM_015378, intron 62 of 69) -105268 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr3-1688 chr3 23273663 23273873 + 13.2 0.000 intron (NM_001370225, intron 3 of 5) intron (NM_001370225, intron 3 of 5) 70441 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr6-583 chr6 130365431 130365641 + 13.2 0.000 promoter-TSS (NM_001258277) promoter-TSS (NM_001258277) 332 NM_001258275 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr18-2698 chr18 60809239 60809449 + 13.2 0.000 Intergenic Intergenic -436569 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr12-2249 chr12 75271766 75271976 + 13.2 0.000 Intergenic MLT2A2|LTR|ERVL 37131 NR_149000 100130268 Hs.524596 NR_149000 ENSG00000254451 LOC100130268 - uncharacterized LOC100130268 ncRNA chr7-4476 chr7 137003185 137003395 + 13.2 0.000 intron (NM_001006630, intron 3 of 3) intron (NM_001006630, intron 3 of 3) 100123 NR_030165 574443 NR_030165 ENSG00000207597 MIR490 MIRN490|hsa-mir-490|miR-490 microRNA 490 ncRNA chr9-4944 chr9 15087205 15087415 + 13.2 0.000 Intergenic Intergenic 93983 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr1-9725 chr1 53362762 53362972 + 13.2 0.000 Intergenic Intergenic 34634 NR_131923 105378732 Hs.118609 NR_131923 ENSG00000225675 LINC01771 - long intergenic non-protein coding RNA 1771 ncRNA chr8-1026 chr8 22994391 22994601 + 13.2 0.000 intron (NM_001160036, intron 2 of 11) intron (NM_001160036, intron 2 of 11) -1352 NM_001160037 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr9-2621 chr9 16642848 16643058 + 13.2 0.000 intron (NM_001317940, intron 2 of 5) MIR|SINE|MIR -83861 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr8-894 chr8 48514098 48514308 + 13.2 0.000 Intergenic Intergenic -37364 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr4-3037 chr4 136741668 136741878 + 13.2 0.000 Intergenic Intergenic -451983 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr11-3256 chr11 74318455 74318665 + 13.2 0.000 intron (NR_120556, intron 3 of 6) L1MD2|LINE|L1 -6920 NM_001288748 283208 Hs.660541 NM_182904 ENSG00000149380 P4HA3 - prolyl 4-hydroxylase subunit alpha 3 protein-coding chr5-2171 chr5 126003372 126003582 + 13.2 0.000 Intergenic Intergenic -176100 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr1-5996 chr1 46406567 46406777 + 13.2 0.000 intron (NM_001441, intron 7 of 14) AluYm1|SINE|Alu 12355 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr7-2027 chr7 70052686 70052896 + 13.2 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 454316 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr16-2244 chr16 361376 361586 + 13.2 0.000 Intergenic CpG -8758 NM_181050 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr1-7457 chr1 63968811 63969021 + 13.2 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 143289 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr11-2819 chr11 123173356 123173566 + 13.2 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 21787 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr19-898 chr19 41353783 41353993 + 13.2 0.000 promoter-TSS (NM_000660) promoter-TSS (NM_000660) 34 NM_000660 7040 Hs.645227 NM_000660 ENSG00000105329 TGFB1 CED|DPD1|IBDIMDE|LAP|TGFB|TGFbeta transforming growth factor beta 1 protein-coding chr4-786 chr4 1806314 1806524 + 13.2 0.000 intron (NR_148971, intron 16 of 18) intron (NR_148971, intron 16 of 18) 13107 NM_001163213 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr11-5420 chr11 68713191 68713401 + 13.2 0.000 exon (NM_004923, exon 8 of 10) exon (NM_004923, exon 8 of 10) 28752 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr1-2162 chr1 25233177 25233387 + 13.2 0.000 promoter-TSS (NM_015484) promoter-TSS (NM_015484) -780 NM_207170 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr1-10938 chr1 211764654 211764864 + 13.2 0.000 intron (NM_014873, intron 6 of 7) intron (NM_014873, intron 6 of 7) -64878 NR_135818 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr12-1570 chr12 120622788 120622998 + 13.2 0.000 Intergenic AluSx|SINE|Alu -17726 NM_001033677 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr12-2045 chr12 84911186 84911396 + 13.2 0.000 intron (NM_182767, intron 1 of 11) intron (NM_182767, intron 1 of 11) 1508 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr11-3609 chr11 68118699 68118909 + 13.2 0.000 intron (NM_001277, intron 1 of 11) intron (NM_001277, intron 1 of 11) 2584 NM_001277 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr5-1696 chr5 92249847 92250057 + 13.2 0.000 Intergenic L1PA15|LINE|L1 -866635 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr16-1132 chr16 70250906 70251116 + 13.2 0.000 3' UTR (NM_058219, exon 1 of 1) 3' UTR (NM_058219, exon 1 of 1) 929 NM_058219 118460 Hs.660633 NM_058219 ENSG00000223496 EXOSC6 EAP4|MTR3|Mtr3p|hMtr3p|p11 exosome component 6 protein-coding chr5-5025 chr5 84688603 84688813 + 13.2 0.000 Intergenic LOR1b|LTR|ERV1 -303828 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr8-588 chr8 141871915 141872125 + 13.2 0.000 Intergenic Intergenic -85707 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr1-10888 chr1 206534430 206534640 + 13.2 0.000 intron (NM_182664, intron 1 of 4) intron (NM_182664, intron 1 of 4) -22629 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr14-1839 chr14 61126540 61126750 + 13.2 0.000 Intergenic Intergenic -144955 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr1-2594 chr1 53572552 53572762 + 13.2 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 113258 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr8-2805 chr8 123993790 123994000 + 13.2 0.000 intron (NM_001039112, intron 12 of 40) L1PB3|LINE|L1 46887 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr1-4028 chr1 192640189 192640399 + 13.2 0.000 intron (NM_002927, intron 3 of 6) intron (NM_002927, intron 3 of 6) 4147 NM_144766 6003 Hs.497220 NM_002927 ENSG00000127074 RGS13 - regulator of G protein signaling 13 protein-coding chr3-1018 chr3 120285288 120285498 + 13.2 0.000 Intergenic CpG -41098 NM_001168271 165829 Hs.333358 NM_153002 ENSG00000175697 GPR156 GABABL|PGR28 G protein-coupled receptor 156 protein-coding chr16-2452 chr16 85264627 85264837 + 13.2 0.000 Intergenic Intergenic -18226 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr12-3806 chr12 61779326 61779536 + 13.2 0.000 intron (NM_178539, intron 2 of 4) MER94|DNA|hAT-Blackjack 413408 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr5-1242 chr5 177130794 177131004 + 13.2 0.000 Intergenic Intergenic -2180 NM_172349 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr2-4086 chr2 134206888 134207098 + 13.2 0.000 intron (NM_001371457, intron 1 of 16) MLT1D|LTR|ERVL-MaLR -47079 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr3-5795 chr3 27629591 27629801 + 13.2 0.000 Intergenic L1MC5|LINE|L1 92627 NM_001278182 8320 Hs.591663 NM_005442 ENSG00000163508 EOMES TBR2 eomesodermin protein-coding chr18-550 chr18 55287398 55287608 + 13.2 0.000 intron (NM_001243228, intron 8 of 19) intron (NM_001243228, intron 8 of 19) 15157 NM_001243236 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr3-2950 chr3 59424772 59424982 + 13.2 0.000 Intergenic MER58A|DNA|hAT-Charlie 233620 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr15-1864 chr15 60361364 60361574 + 13.2 0.000 intron (NM_001002857, intron 5 of 13) intron (NM_001002857, intron 5 of 13) 36517 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr2-3185 chr2 213188242 213188452 + 13.2 0.000 Intergenic Intergenic -20637 NR_146974 105373863 Hs.258045 NR_146974 LINC01953 - long intergenic non-protein coding RNA 1953 ncRNA chr16-1360 chr16 692779 692989 + 13.2 0.000 3' UTR (NM_153350, exon 6 of 6) 3' UTR (NM_153350, exon 6 of 6) -2486 NM_032259 84219 Hs.459632 NM_032259 ENSG00000127580 WDR24 C16orf21|JFP7 WD repeat domain 24 protein-coding chr17-5540 chr17 43908200 43908410 + 13.2 0.000 promoter-TSS (NM_001278373) promoter-TSS (NM_001278373) -363 NM_001278381 4355 Hs.514208 NM_005374 ENSG00000108852 MPP2 DLG2 membrane palmitoylated protein 2 protein-coding chr12-2342 chr12 4590844 4591054 + 13.2 0.000 intron (NR_104115, intron 2 of 5) intron (NR_104115, intron 2 of 5) 871 NR_104115 8798 Hs.439530 NM_003845 ENSG00000010219 DYRK4 - dual specificity tyrosine phosphorylation regulated kinase 4 protein-coding chr15-2036 chr15 51686115 51686325 + 13.2 0.000 intron (NM_013243, intron 4 of 11) intron (NM_013243, intron 4 of 11) 4717 NM_013243 29106 Hs.232618 NM_013243 ENSG00000104112 SCG3 SGIII secretogranin III protein-coding chr16-2303 chr16 13526180 13526390 + 13.2 0.000 Intergenic Intergenic -393872 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr10-3072 chr10 4260474 4260684 + 13.2 0.000 Intergenic Intergenic -16667 NR_108040 100652988 Hs.433011 NR_108040 LINC00702 - long intergenic non-protein coding RNA 702 ncRNA chr4-6050 chr4 4177865 4178075 + 13.2 0.000 Intergenic Intergenic 48924 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr4-2450 chr4 173181838 173182048 + 13.2 0.000 intron (NM_017423, intron 1 of 11) intron (NM_017423, intron 1 of 11) -12291 NR_134241 101930370 Hs.563191 NR_134241 ENSG00000245213 LOC101930370 - uncharacterized LOC101930370 ncRNA chr7-1999 chr7 14836672 14836882 + 13.2 0.000 intron (NM_001350717, intron 2 of 24) intron (NM_001350717, intron 2 of 24) 4673 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr5-2241 chr5 11022139 11022349 + 13.2 0.000 intron (NM_001288715, intron 16 of 20) intron (NM_001288715, intron 16 of 20) -261010 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr12-2133 chr12 93184617 93184827 + 13.2 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) 10356 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr6-3108 chr6 97834353 97834563 + 13.2 0.000 Intergenic Intergenic -190073 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr20-2372 chr20 17166364 17166574 + 13.2 0.000 Intergenic Intergenic -59638 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr5-1572 chr5 140346418 140346628 + 13.2 0.000 promoter-TSS (NM_001945) promoter-TSS (NM_001945) 80 NM_001945 1839 Hs.799 NM_001945 ENSG00000113070 HBEGF DTR|DTS|DTSF|HEGFL heparin binding EGF like growth factor protein-coding chr22-1018 chr22 25448288 25448498 + 13.2 0.000 intron (NR_033734, intron 1 of 4) intron (NR_033734, intron 1 of 4) 306 NR_033734 1416 Hs.571835 NR_033733 ENSG00000100058 CRYBB2P1 CRYB2B crystallin beta B2 pseudogene 1 pseudo chr22-1922 chr22 46217426 46217636 + 13.2 0.000 intron (NM_001001928, intron 4 of 7) intron (NM_001001928, intron 4 of 7) 32762 NM_207327 150383 Hs.103110 NM_207327 ENSG00000205643 CDPF1 C22orf40 cysteine rich DPF motif domain containing 1 protein-coding chr9-2772 chr9 109520483 109520693 + 13.2 0.000 Intergenic Intergenic -9043 NR_037493 100500898 NR_037493 ENSG00000263861 MIR3927 - microRNA 3927 ncRNA chr6-1244 chr6 1702029 1702239 + 13.2 0.000 intron (NM_001253846, intron 9 of 10) intron (NM_001253846, intron 9 of 10) 92219 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr6-2413 chr6 155011274 155011484 + 13.2 0.000 Intergenic Intergenic -78910 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr8-1166 chr8 23890702 23890912 + 13.2 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -36001 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr11-3140 chr11 46352043 46352253 + 13.2 0.000 intron (NM_001199266, intron 1 of 30) intron (NM_001199266, intron 1 of 30) 4685 NM_003646 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr3-1206 chr3 42032734 42032944 + 13.2 0.000 Intergenic AluJr|SINE|Alu -54361 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr4-1171 chr4 1174982 1175192 + 13.2 0.000 intron (NM_001199021, intron 2 of 7) intron (NM_001199021, intron 2 of 7) -1876 NM_001128325 10417 Hs.302963 NM_012445 ENSG00000159674 SPON2 DIL-1|DIL1|M-SPONDIN|MINDIN spondin 2 protein-coding chr9-2763 chr9 107336994 107337204 + 13.2 0.000 Intergenic Intergenic 52330 NM_001244713 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr15-857 chr15 80550356 80550566 + 13.2 0.000 intron (NM_014862, intron 8 of 18) intron (NM_014862, intron 8 of 18) 12483 NR_120363 101929586 Hs.569426 NR_120363 ENSG00000259175 LOC101929586 - uncharacterized LOC101929586 ncRNA chr16-1722 chr16 49528354 49528564 + 13.2 0.000 intron (NM_001271620, intron 5 of 7) intron (NM_001271620, intron 5 of 7) -9874 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr6-1505 chr6 150129998 150130208 + 13.2 0.000 Intergenic Intergenic -12941 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr10-2287 chr10 15313093 15313303 + 13.2 0.000 intron (NM_001010924, intron 1 of 7) intron (NM_001010924, intron 1 of 7) 58091 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr16-1475 chr16 766838 767048 + 13.2 0.000 exon (NM_001177355, exon 15 of 18) exon (NM_001177355, exon 15 of 18) -3240 NR_030384 724032 NR_030384 ENSG00000207579 MIR662 MIRN662|hsa-mir-662 microRNA 662 ncRNA chr9-1105 chr9 134805707 134805917 + 13.2 0.000 intron (NM_001278074, intron 41 of 65) intron (NM_001278074, intron 41 of 65) 43557 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr5-2855 chr5 73892823 73893033 + 13.2 0.000 intron (NM_001177693, intron 27 of 35) (TG)n|Simple_repeat|Simple_repeat 79382 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr6-5472 chr6 160742053 160742263 + 13.2 0.000 intron (NM_000301, intron 17 of 18) L1PREC2|LINE|L1 39965 NM_000301 5340 Hs.143436 NM_000301 ENSG00000122194 PLG - plasminogen protein-coding chr17-6110 chr17 81081253 81081463 + 13.2 0.000 intron (NM_001144888, intron 3 of 13) intron (NM_001144888, intron 3 of 13) 44015 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr3-5580 chr3 6678013 6678223 + 13.2 0.000 intron (NR_110123, intron 2 of 3) L2a|LINE|L2 127331 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr10-5476 chr10 79628199 79628409 + 13.2 0.000 TTS (NR_134315) TTS (NR_134315) 17365 NM_001093770 653509 Hs.535295 NM_005411 ENSG00000122852 SFTPA1 COLEC4|PSAP|PSP-A|PSPA|SFTP1|SFTPA1B|SP-A|SP-A1|SPA|SPA1 surfactant protein A1 protein-coding chr10-1666 chr10 119372075 119372285 + 13.2 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -5792 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr16-1706 chr16 11641525 11641735 + 13.2 0.000 Intergenic (TATC)n|Simple_repeat|Simple_repeat -26825 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr12-3396 chr12 104295703 104295913 + 13.2 0.000 intron (NM_001261446, intron 2 of 13) intron (NM_001261446, intron 2 of 13) -7931 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr10-1736 chr10 119172756 119172966 + 13.2 0.000 intron (NR_126103, intron 2 of 4) AluJo|SINE|Alu 5951 NR_126106 10935 Hs.523302 NM_006793 ENSG00000165672 PRDX3 AOP-1|AOP1|HBC189|MER5|PRO1748|SP-22|prx-III peroxiredoxin 3 protein-coding chr15-900 chr15 42139384 42139594 + 13.2 0.000 non-coding (NR_033151, exon 19 of 19) non-coding (NR_033151, exon 19 of 19) 17147 NR_033151 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr8-2245 chr8 41925464 41925674 + 13.2 0.000 Intergenic L1ME3B|LINE|L1 -28828 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr9-4209 chr9 37174287 37174497 + 13.2 0.000 intron (NM_001289120, intron 2 of 8) intron (NM_001289120, intron 2 of 8) 53794 NM_001289121 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr11-2405 chr11 8194480 8194690 + 13.2 0.000 Intergenic Intergenic -25560 NM_001346694 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr20-2179 chr20 46708377 46708587 + 13.2 0.000 Intergenic L2a|LINE|L2 -1167 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATORS|ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr22-1117 chr22 38572284 38572494 + 13.2 0.000 Intergenic Intergenic 1889 NR_134627 105373031 Hs.144041 NR_134627 LOC105373031 - uncharacterized LOC105373031 ncRNA chr4-1240 chr4 2788830 2789040 + 13.2 0.000 Intergenic Intergenic -4150 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr10-1740 chr10 126177584 126177794 + 13.2 0.000 intron (NM_001288974, intron 3 of 18) intron (NM_001288974, intron 3 of 18) -204416 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr7-1668 chr7 102983751 102983961 + 13.2 0.000 intron (NR_105043, intron 7 of 20) ERVL-B4-int|LTR|ERVL 10426 NM_001085386 58160 Hs.621233 NM_001085386 ENSG00000230257 NFE4 NF-E4 nuclear factor, erythroid 4 protein-coding chr22-2919 chr22 46664820 46665030 + 13.2 0.000 intron (NM_015124, intron 8 of 18) intron (NM_015124, intron 8 of 18) 44539 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr9-3890 chr9 134219276 134219486 + 13.2 0.000 Intergenic MIR1_Amn|SINE|MIR -54817 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr1-2039 chr1 209747802 209748012 + 13.2 0.000 Intergenic CpG -5345 NR_134510 101930114 Hs.663934 NR_134509 ENSG00000227591 HSD11B1-AS1 - HSD11B1 antisense RNA 1 ncRNA chr12-1634 chr12 121792455 121792665 + 13.2 0.000 intron (NM_019034, intron 2 of 4) intron (NM_019034, intron 2 of 4) 1128 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr1-5326 chr1 226603476 226603686 + 13.2 0.000 3' UTR (NM_001003665, exon 4 of 4) 3' UTR (NM_001003665, exon 4 of 4) 54817 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr9-2069 chr9 37943195 37943405 + 13.2 0.000 intron (NM_003028, intron 5 of 5) intron (NM_003028, intron 5 of 5) -38947 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr7-2041 chr7 99473500 99473710 + 13.2 0.000 intron (NM_001350999, intron 1 of 3) intron (NM_001350999, intron 1 of 3) 713 NM_001350999 285989 Hs.440384 NM_213603 ENSG00000198556 ZNF789 - zinc finger protein 789 protein-coding chr17-6624 chr17 63424957 63425167 + 13.2 0.000 3' UTR (NM_025185, exon 26 of 26) 3' UTR (NM_025185, exon 26 of 26) 15205 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr7-2129 chr7 33743698 33743908 + 13.2 0.000 Intergenic Intergenic -161112 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr14-735 chr14 20682807 20683017 + 13.2 0.000 Intergenic CpG -1265 NM_001145 283 Hs.283749 NM_001145 ENSG00000214274 ANG ALS9|HEL168|RAA1|RNASE4|RNASE5 angiogenin protein-coding chr2-5537 chr2 159290483 159290693 + 13.2 0.000 Intergenic LTR86B1|LTR|ERVL -3885 NM_001330276 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr1-10917 chr1 209301433 209301643 + 13.2 0.000 Intergenic LTR16B2|LTR|ERVL -23918 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr2-5735 chr2 217908772 217908982 + 13.2 0.000 intron (NM_001308023, intron 1 of 29) intron (NM_001308023, intron 1 of 29) -8249 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr3-4339 chr3 179091096 179091306 + 13.2 0.000 Intergenic L1PA16|LINE|L1 -19392 NM_022470 64393 Hs.371609 NM_022470 ENSG00000172667 ZMAT3 PAG608|WIG-1|WIG1 zinc finger matrin-type 3 protein-coding chr1-2881 chr1 232186998 232187208 + 13.2 0.000 Intergenic Intergenic 261269 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr5-824 chr5 10590741 10590951 + 13.2 0.000 intron (NM_001164440, intron 1 of 3) L1MEg|LINE|L1 26776 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr10-1851 chr10 68985247 68985457 + 13.1 0.000 TTS (NM_004728) TTS (NM_004728) -3451 NM_015634 26128 Hs.279580 NM_015634 ENSG00000198954 KIF1BP KBP|KIAA1279|TTC20 KIF1 binding protein protein-coding chr12-3135 chr12 41915393 41915603 + 13.1 0.000 Intergenic AluSq|SINE|Alu 151309 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr2-2569 chr2 223943615 223943825 + 13.1 0.000 intron (NM_020830, intron 1 of 11) intron (NM_020830, intron 1 of 11) 1615 NM_020830 57590 Hs.368359 NM_020830 ENSG00000085449 WDFY1 FENS-1|FENS1|WDF1|ZFYVE17 WD repeat and FYVE domain containing 1 protein-coding chr8-2169 chr8 91180325 91180535 + 13.1 0.000 intron (NR_148895, intron 7 of 10) MLT1F1|LTR|ERVL-MaLR -25055 NR_039805 100616245 NR_039805 ENSG00000266194 MIR4661 - microRNA 4661 ncRNA chr6-1414 chr6 138232762 138232972 + 13.1 0.000 intron (NM_020340, intron 5 of 33) intron (NM_020340, intron 5 of 33) -14377 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr1-7559 chr1 202437728 202437938 + 13.1 0.000 exon (NM_001167857, exon 10 of 10) exon (NM_001167857, exon 10 of 10) -24881 NM_032104 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr3-2056 chr3 148648993 148649203 + 13.1 0.000 Intergenic Intergenic -48773 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr13-698 chr13 34913242 34913452 + 13.1 0.000 Intergenic Intergenic -28940 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr2-4155 chr2 176638086 176638296 + 13.1 0.000 promoter-TSS (NR_040001) promoter-TSS (NR_040001) 437 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr2-2325 chr2 144183827 144184037 + 13.1 0.000 intron (NM_001284238, intron 4 of 13) intron (NM_001284238, intron 4 of 13) 27647 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr17-2894 chr17 40444104 40444314 + 13.1 0.000 intron (NM_001552, intron 1 of 3) intron (NM_001552, intron 1 of 3) 759 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr14-1192 chr14 69129567 69129777 + 13.1 0.000 intron (NM_003861, intron 1 of 8) intron (NM_003861, intron 1 of 8) 22927 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr6-1197 chr6 5094384 5094594 + 13.1 0.000 intron (NR_134856, intron 2 of 3) AluJr|SINE|Alu 9003 NM_001145115 648791 Hs.653089 NM_001145115 ENSG00000219607 PPP1R3G - protein phosphatase 1 regulatory subunit 3G protein-coding chr19-1457 chr19 35258676 35258886 + 13.1 0.000 intron (NM_001260490, intron 2 of 6) intron (NM_001260490, intron 2 of 6) 10125 NM_001260490 51599 Hs.466507 NM_015925 ENSG00000105699 LSR ILDR3|LISCH7 lipolysis stimulated lipoprotein receptor protein-coding chr10-3899 chr10 66122527 66122737 + 13.1 0.000 intron (NM_001127384, intron 13 of 17) intron (NM_001127384, intron 13 of 17) 551207 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr10-6071 chr10 130202416 130202626 + 13.1 0.000 Intergenic AluJb|SINE|Alu 66112 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr11-2333 chr11 73121793 73122003 + 13.1 0.000 intron (NM_014824, intron 2 of 19) MER5A|DNA|hAT-Charlie 20420 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr4-474 chr4 183736216 183736426 + 13.1 0.000 Intergenic SVA_E|Retroposon|SVA -61701 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr11-1816 chr11 11973422 11973632 + 13.1 0.000 intron (NM_015881, intron 4 of 7) intron (NM_015881, intron 4 of 7) 35112 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr6-709 chr6 50820259 50820469 + 13.1 0.000 intron (NM_003221, intron 1 of 6) CpG 1493 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr2-2455 chr2 75290853 75291063 + 13.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -91438 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr5-3444 chr5 158133448 158133658 + 13.1 0.000 Intergenic Intergenic -274408 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr2-1502 chr2 17878654 17878864 + 13.1 0.000 promoter-TSS (NM_002252) promoter-TSS (NM_002252) 92 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr15-1260 chr15 80480537 80480747 + 13.1 0.000 intron (NM_014862, intron 5 of 18) intron (NM_014862, intron 5 of 18) 76260 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr2-1277 chr2 85652541 85652751 + 13.1 0.000 Intergenic AluJo|SINE|Alu 15553 NM_001367281 6439 Hs.512690 NM_000542 ENSG00000168878 SFTPB PSP-B|SFTB3|SFTP3|SMDP1|SP-B surfactant protein B protein-coding chr6-3887 chr6 58237404 58237614 + 13.1 0.000 Intergenic L1PA16|LINE|L1 -276063 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr8-2337 chr8 19096420 19096630 + 13.1 0.000 Intergenic Intergenic -82822 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr3-1570 chr3 47114013 47114223 + 13.1 0.000 intron (NR_146158, intron 4 of 21) intron (NR_146158, intron 4 of 21) 49859 NM_014159 29072 Hs.517941 NM_012271 ENSG00000181555 SETD2 HBP231|HIF-1|HIP-1|HSPC069|HYPB|KMT3A|LLS|SET2|p231HBP SET domain containing 2, histone lysine methyltransferase protein-coding chr7-3608 chr7 31934557 31934767 + 13.1 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 135745 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr19-1813 chr19 1986572 1986782 + 13.1 0.000 intron (NM_017797, intron 8 of 8) intron (NM_017797, intron 8 of 8) 29037 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr15-1885 chr15 70726903 70727113 + 13.1 0.000 intron (NM_018003, intron 1 of 18) intron (NM_018003, intron 1 of 18) -24726 NM_001008224 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr16-1945 chr16 14300798 14301008 + 13.1 0.000 Intergenic Intergenic -1385 NR_132983 100129781 Hs.190748 NR_132983 MIR193BHG - MIR193B host gene ncRNA chr1-2119 chr1 201536731 201536941 + 13.1 0.000 Intergenic Intergenic 16932 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr21-769 chr21 43964865 43965075 + 13.1 0.000 intron (NM_001369880, intron 2 of 8) AluJb|SINE|Alu 39572 NM_001037553 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr5-2831 chr5 53464163 53464373 + 13.1 0.000 Intergenic MamRTE1|LINE|RTE-BovB -16361 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr10-5988 chr10 124515381 124515591 + 13.1 0.000 intron (NM_001167880, intron 5 of 5) L1MEc|LINE|L1 53663 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr3-7173 chr3 187130648 187130858 + 13.1 0.000 intron (NM_052969, intron 1 of 2) intron (NM_052969, intron 1 of 2) 8743 NM_052969 116832 Hs.647900 NM_052969 ENSG00000163923 RPL39L L39-2|RPL39L1 ribosomal protein L39 like protein-coding chr8-1178 chr8 35487026 35487236 + 13.1 0.000 intron (NM_080872, intron 1 of 16) intron (NM_080872, intron 1 of 16) -57261 NM_001322818 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr2-2719 chr2 84946582 84946792 + 13.1 0.000 Intergenic Intergenic -24474 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr1-3056 chr1 12219206 12219416 + 13.1 0.000 Intergenic AluSc8|SINE|Alu -10719 NM_018156 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr4-2920 chr4 88661839 88662049 + 13.1 0.000 intron (NM_001271602, intron 9 of 24) intron (NM_001271602, intron 9 of 24) 35885 NM_153757 266812 Hs.12554 NM_153757 ENSG00000177432 NAP1L5 DRLM nucleosome assembly protein 1 like 5 protein-coding chr8-1369 chr8 130727420 130727630 + 13.1 0.000 Intergenic Intergenic -283851 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr4-2066 chr4 17103299 17103509 + 13.1 0.000 Intergenic Intergenic 82653 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr19-2800 chr19 47453824 47454034 + 13.1 0.000 intron (NM_015063, intron 3 of 9) AluJb|SINE|Alu 17964 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr12-5041 chr12 87871213 87871423 + 13.1 0.000 Intergenic Intergenic -86607 NR_033410 400058 Hs.572212 NR_033410 MKRN9P MKRN5|MKRN9|MKRNP6|RNF65|ZNF127L3 makorin ring finger protein 9, pseudogene pseudo chr14-807 chr14 89619200 89619410 + 13.1 0.000 promoter-TSS (NM_001085471) promoter-TSS (NM_001085471) -140 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr5-3247 chr5 97534181 97534391 + 13.1 0.000 intron (NR_105028, intron 2 of 3) intron (NR_105028, intron 2 of 3) 29590 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr1-5424 chr1 29306983 29307193 + 13.1 0.000 intron (NM_133178, intron 18 of 29) intron (NM_133178, intron 18 of 29) 43026 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr11-1140 chr11 100687761 100687971 + 13.1 0.000 promoter-TSS (NR_133571) promoter-TSS (NR_133571) 89 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr10-1231 chr10 70053695 70053905 + 13.1 0.000 intron (NM_018649, intron 1 of 8) CpG 954 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr1-4630 chr1 166271000 166271210 + 13.1 0.000 Intergenic Intergenic -104350 NR_135199 149297 Hs.22930 NM_001017961 ENSG00000188859 FAM78B - family with sequence similarity 78 member B protein-coding chr11-1992 chr11 37504350 37504560 + 13.1 0.000 Intergenic Intergenic -434146 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr1-2939 chr1 55007682 55007892 + 13.1 0.000 intron (NM_057176, intron 3 of 3) intron (NM_057176, intron 3 of 3) 8854 NM_057176 7809 Hs.151291 NM_057176 ENSG00000162399 BSND BART|DFNB73 barttin CLCNK type accessory beta subunit protein-coding chr12-2968 chr12 110180796 110181006 + 13.1 0.000 intron (NR_144950, intron 12 of 18) intron (NR_144950, intron 12 of 18) 56544 NR_144950 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr10-2414 chr10 132796629 132796839 + 13.1 0.000 Intergenic Intergenic -10587 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chrX-2180 chrX 39164919 39165129 + 13.1 0.000 Intergenic Intergenic 162338 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr8-1391 chr8 28341286 28341496 + 13.1 0.000 intron (NM_001284244, intron 2 of 2) intron (NM_001284244, intron 2 of 2) 2744 NM_001284244 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr4-1737 chr4 15717143 15717353 + 13.1 0.000 intron (NM_004334, intron 6 of 8) intron (NM_004334, intron 6 of 8) 14183 NM_004334 683 Hs.720344 NM_004334 ENSG00000109743 BST1 CD157 bone marrow stromal cell antigen 1 protein-coding chr16-1487 chr16 2502733 2502943 + 13.1 0.000 3' UTR (NM_001199107, exon 8 of 8) 3' UTR (NM_001199107, exon 8 of 8) -10888 NM_001198569 527 Hs.389107 NM_001694 ENSG00000185883 ATP6V0C ATP6C|ATP6L|ATPL|VATL|VPPC|Vma3 ATPase H+ transporting V0 subunit c protein-coding chr8-1978 chr8 76790715 76790925 + 13.1 0.000 intron (NM_024721, intron 4 of 10) intron (NM_024721, intron 4 of 10) -107545 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA chr2-1833 chr2 149077272 149077482 + 13.1 0.000 promoter-TSS (NM_001317004) promoter-TSS (NM_001317004) -145 NM_001317004 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr9-1526 chr9 125776964 125777174 + 13.1 0.000 intron (NR_024122, intron 2 of 7) AluSz6|SINE|Alu 28886 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr17-3183 chr17 80724662 80724872 + 13.1 0.000 intron (NM_020761, intron 4 of 33) intron (NM_020761, intron 4 of 33) 80865 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr11-3045 chr11 6219397 6219607 + 13.1 0.000 intron (NM_032127, intron 6 of 11) intron (NM_032127, intron 6 of 11) 13945 NM_173525 160298 Hs.278221 NM_173525 ENSG00000180878 C11orf42 - chromosome 11 open reading frame 42 protein-coding chr9-2056 chr9 21583389 21583599 + 13.1 0.000 Intergenic Intergenic -23696 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr12-5011 chr12 82329851 82330061 + 13.1 0.000 Intergenic LTR40a|LTR|ERVL 28431 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr2-5783 chr2 225735930 225736140 + 13.1 0.000 Intergenic Intergenic 335149 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr5-453 chr5 81393863 81394073 + 13.1 0.000 intron (NM_130767, intron 1 of 14) CpG 166 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr3-2391 chr3 183650549 183650759 + 13.1 0.000 non-coding (NR_146169, exon 2 of 6) non-coding (NR_146169, exon 2 of 6) 15031 NM_001349414 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding chr6-3151 chr6 112337274 112337484 + 13.1 0.000 Intergenic Intergenic -9951 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr17-1641 chr17 32021108 32021318 + 13.1 0.000 promoter-TSS (NM_052888) promoter-TSS (NM_052888) 77 NM_052888 114659 Hs.514071 NM_052888 ENSG00000185158 LRRC37B LRRC37 leucine rich repeat containing 37B protein-coding chr1-2549 chr1 10474875 10475085 + 13.1 0.000 promoter-TSS (NM_004565) promoter-TSS (NM_004565) 30 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr19-1916 chr19 58407040 58407250 + 13.1 0.000 Intergenic Intergenic -1504 NM_173548 201514 Hs.439551 NM_173548 ENSG00000171574 ZNF584 - zinc finger protein 584 protein-coding chr12-2236 chr12 60636918 60637128 + 13.1 0.000 Intergenic HERVL-int|LTR|ERVL 947653 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr17-2263 chr17 17749994 17750204 + 13.1 0.000 intron (NM_030665, intron 2 of 5) MLT1J2|LTR|ERVL-MaLR 16203 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr1-5047 chr1 90527993 90528203 + 13.1 0.000 Intergenic MIRc|SINE|MIR -129652 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr1-2516 chr1 223731226 223731436 + 13.1 0.000 intron (NM_001146068, intron 2 of 20) intron (NM_001146068, intron 2 of 20) 18792 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr1-3660 chr1 108560677 108560887 + 13.1 0.000 intron (NM_001010883, intron 1 of 10) intron (NM_001010883, intron 1 of 10) 682 NM_001010883 284611 Hs.200230 NM_001010883 ENSG00000162636 FAM102B SYM-3B family with sequence similarity 102 member B protein-coding chr4-3827 chr4 121791602 121791812 + 13.1 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -9616 NM_005033 5393 Hs.91728 NM_005033 ENSG00000123737 EXOSC9 PCH1D|PM/Scl-75|PMSCL1|RRP45|Rrp45p|p5|p6 exosome component 9 protein-coding chr11-3106 chr11 33058847 33059057 + 13.1 0.000 intron (NM_001145541, intron 5 of 9) intron (NM_001145541, intron 5 of 9) -17198 NR_015451 283267 Hs.533701 NR_015451 ENSG00000280798 LINC00294 NCRNA00294 long intergenic non-protein coding RNA 294 ncRNA chr1-3036 chr1 2151335 2151545 + 13.1 0.000 intron (NR_146911, intron 6 of 15) intron (NR_146911, intron 6 of 15) 32435 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr15-1369 chr15 79394387 79394597 + 13.1 0.000 intron (NM_001330376, intron 2 of 2) intron (NM_001330376, intron 2 of 2) -38024 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr9-3474 chr9 12620846 12621056 + 13.1 0.000 Intergenic Intergenic -72434 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr1-3511 chr1 161946470 161946680 + 13.1 0.000 intron (NM_007348, intron 15 of 15) intron (NM_007348, intron 15 of 15) 77890 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr5-2540 chr5 172163432 172163642 + 13.1 0.000 intron (NM_005990, intron 1 of 18) intron (NM_005990, intron 1 of 18) 24687 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr16-1375 chr16 56815158 56815368 + 13.1 0.000 intron (NM_014669, intron 5 of 21) intron (NM_014669, intron 5 of 21) 31807 NM_001242796 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr18-2054 chr18 47653628 47653838 + 13.1 0.000 Intergenic Intergenic 273237 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr3-1834 chr3 63913019 63913229 + 13.1 0.000 intron (NM_001177387, intron 2 of 12) intron (NM_001177387, intron 2 of 12) -1352 NR_148359 100861563 NR_148359 ENSG00000280620 SCAANT1 ATXN7-AS1 SCA7/ATXN7 antisense RNA 1 ncRNA chr1-5516 chr1 183040782 183040992 + 13.1 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 17467 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr1-8394 chr1 77941106 77941316 + 13.1 0.000 intron (NM_001172309, intron 10 of 11) intron (NM_001172309, intron 10 of 11) 37861 NR_130152 8880 Hs.567380 NM_003902 ENSG00000162613 FUBP1 FBP|FUBP|hDH V far upstream element binding protein 1 protein-coding chr16-3076 chr16 64030133 64030343 + 13.1 0.000 Intergenic L1MCa|LINE|L1 1091825 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr21-483 chr21 45982840 45983050 + 13.1 0.000 intron (NM_001848, intron 2 of 34) intron (NM_001848, intron 2 of 34) 1196 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr6-3308 chr6 163314592 163314802 + 13.1 0.000 intron (NR_028390, intron 4 of 5) intron (NR_028390, intron 4 of 5) 9776 NR_028390 285796 Hs.668693 NR_028390 ENSG00000281692 PACRG-AS1 - PACRG antisense RNA 1 ncRNA chr12-2193 chr12 12901552 12901762 + 13.1 0.000 intron (NM_003979, intron 1 of 3) L2b|LINE|L2 10635 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr22-814 chr22 45636845 45637055 + 13.1 0.000 Intergenic Intergenic -31303 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr8-684 chr8 116874269 116874479 + 13.1 0.000 promoter-TSS (NR_033886) promoter-TSS (NR_033886) -50 NR_033886 644660 Hs.706174 NR_033886 ENSG00000253327 RAD21-AS1 C8orf81|NCRNA00255 RAD21 antisense RNA 1 ncRNA chr17-2287 chr17 35088001 35088211 + 13.1 0.000 intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) 1120 NR_037713 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr15-2152 chr15 76177756 76177966 + 13.1 0.000 intron (NR_120360, intron 2 of 2) intron (NR_120360, intron 2 of 2) 3625 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr10-2749 chr10 119414180 119414390 + 13.1 0.000 intron (NM_005308, intron 4 of 15) intron (NM_005308, intron 4 of 15) 36313 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr11-2685 chr11 78567240 78567450 + 13.1 0.000 intron (NM_024678, intron 3 of 13) MER44B|DNA|TcMar-Tigger 7519 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr15-526 chr15 55649113 55649323 + 13.1 0.000 intron (NM_173814, intron 11 of 19) intron (NM_173814, intron 11 of 19) -60247 NM_015617 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr2-4630 chr2 169221843 169222053 + 13.1 0.000 intron (NM_004525, intron 33 of 78) intron (NM_004525, intron 33 of 78) 140586 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr19-2799 chr19 47423239 47423449 + 13.1 0.000 Intergenic Intergenic -1111 NM_001346148 56917 Hs.380923 NM_020160 ENSG00000105419 MEIS3 MRG2 Meis homeobox 3 protein-coding chr3-1078 chr3 142596365 142596575 + 13.1 0.000 promoter-TSS (NM_001145319) promoter-TSS (NM_001145319) 77 NM_001145319 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr18-1118 chr18 79246694 79246904 + 13.1 0.000 intron (NR_148360, intron 11 of 31) intron (NR_148360, intron 11 of 31) -149131 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr15-1623 chr15 85504081 85504291 + 13.1 0.000 intron (NM_007200, intron 2 of 36) intron (NM_007200, intron 2 of 36) -115764 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr2-5778 chr2 224653526 224653736 + 13.1 0.000 Intergenic Intergenic -68234 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr10-1337 chr10 102229926 102230136 + 13.1 0.000 TTS (NM_005029) TTS (NM_005029) 3732 NM_152310 83401 Hs.302130 NM_152310 ENSG00000119915 ELOVL3 CIG-30|CIG30 ELOVL fatty acid elongase 3 protein-coding chr9-2177 chr9 130854060 130854270 + 13.1 0.000 exon (NM_005157, exon 2 of 11) exon (NM_005157, exon 2 of 11) 18911 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr11-1834 chr11 67252894 67253104 + 13.1 0.000 intron (NR_027473, intron 18 of 20) intron (NR_027473, intron 18 of 20) 12985 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr15-1236 chr15 69794857 69795067 + 13.1 0.000 Intergenic MIR3|SINE|MIR -40272 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr10-1912 chr10 132405463 132405673 + 13.1 0.000 exon (NM_138499, exon 2 of 3) exon (NM_138499, exon 2 of 3) 8368 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr11-2826 chr11 128497369 128497579 + 13.1 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 24836 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr8-4949 chr8 116933864 116934074 + 13.1 0.000 Intergenic MIR|SINE|MIR -4238 NM_001025357 441376 Hs.437551 NM_001025357 ENSG00000205002 AARD C8orf85 alanine and arginine rich domain containing protein protein-coding chr20-867 chr20 5136022 5136232 + 13.1 0.000 intron (NM_003818, intron 1 of 12) intron (NM_003818, intron 1 of 12) 9119 NM_003818 8760 Hs.126857 NM_003818 ENSG00000101290 CDS2 - CDP-diacylglycerol synthase 2 protein-coding chr9-1923 chr9 136962911 136963121 + 13.1 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -6396 NR_157392 101928638 Hs.448074 NM_001101674 LINC02692 C9orf141|PRR31 long intergenic non-protein coding RNA 2692 ncRNA chr17-2251 chr17 11906998 11907208 + 13.1 0.000 intron (NM_001372, intron 61 of 68) MER4B|LTR|ERV1 24201 NM_004662 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr19-1981 chr19 3412402 3412612 + 13.1 0.000 intron (NM_001245002, intron 2 of 10) AluJr|SINE|Alu 45924 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr1-2608 chr1 81800399 81800609 + 13.1 0.000 promoter-TSS (NM_001366009) promoter-TSS (NM_001366009) 107 NM_012302 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr4-1655 chr4 114040829 114041039 + 13.1 0.000 Intergenic Intergenic -61287 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr2-3188 chr2 215460709 215460919 + 13.1 0.000 intron (NR_110607, intron 2 of 3) intron (NR_110607, intron 2 of 3) 7107 NR_110607 102724849 Hs.116161 NR_110607 ENSG00000225166 LOC102724849 - uncharacterized LOC102724849 ncRNA chr8-1806 chr8 115464598 115464808 + 13.1 0.000 intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 203310 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr11-3049 chr11 8070525 8070735 + 13.1 0.000 intron (NM_003320, intron 2 of 12) intron (NM_003320, intron 2 of 12) 10592 NR_120538 101927917 Hs.680586 NR_120537 ENSG00000248332 TUB-AS1 - TUB antisense RNA 1 ncRNA chr9-3265 chr9 27155054 27155264 + 13.1 0.000 intron (NM_001290078, intron 1 of 20) intron (NM_001290078, intron 1 of 20) 46018 NM_001290077 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr11-2161 chr11 95692947 95693157 + 13.1 0.000 Intergenic L1PA16|LINE|L1 96730 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr6-1510 chr6 161038307 161038517 + 13.1 0.000 intron (NM_005922, intron 2 of 26) intron (NM_005922, intron 2 of 26) 46643 NM_005922 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr9-3830 chr9 129949642 129949852 + 13.1 0.000 intron (NM_001363755, intron 6 of 15) intron (NM_001363755, intron 6 of 15) 80142 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr5-2761 chr5 150434597 150434807 + 13.1 0.000 Intergenic Intergenic 15037 NM_001025071 6208 Hs.744846 NM_005617 ENSG00000164587 RPS14 EMTB|S14 ribosomal protein S14 protein-coding chr6-629 chr6 42118547 42118757 + 13.1 0.000 intron (NM_001164446, intron 2 of 4) intron (NM_001164446, intron 2 of 4) 23968 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr15-727 chr15 64602505 64602715 + 13.1 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 100671 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr1-10112 chr1 100034390 100034600 + 13.1 0.000 3' UTR (NM_012243, exon 8 of 8) 3' UTR (NM_012243, exon 8 of 8) -3600 NM_033055 64645 Hs.124156 NM_033055 ENSG00000156875 MFSD14A HIAT1 major facilitator superfamily domain containing 14A protein-coding chr2-2551 chr2 215128955 215129165 + 13.1 0.000 intron (NR_103740, intron 1 of 54) L1PB2|LINE|L1 9566 NM_173076 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr10-3411 chr10 32149308 32149518 + 13.1 0.000 Intergenic Intergenic -92988 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr1-2130 chr1 228213470 228213680 + 13.1 0.000 promoter-TSS (NR_073155) promoter-TSS (NR_073155) 80 NR_073155 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr7-3105 chr7 24965257 24965467 + 13.1 0.000 intron (NM_015550, intron 1 of 22) MIRc|SINE|MIR 14816 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr7-2915 chr7 133602361 133602571 + 13.1 0.000 intron (NM_021807, intron 9 of 17) intron (NM_021807, intron 9 of 17) 222422 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr7-2501 chr7 30474909 30475119 + 13.1 0.000 intron (NM_006092, intron 1 of 13) intron (NM_006092, intron 1 of 13) 3770 NM_006092 10392 Hs.405153 NM_006092 ENSG00000106100 NOD1 CARD4|CLR7.1|NLRC1 nucleotide binding oligomerization domain containing 1 protein-coding chr12-2621 chr12 124478482 124478692 + 13.1 0.000 intron (NM_001077261, intron 5 of 47) intron (NM_001077261, intron 5 of 47) 89025 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr14-914 chr14 75982086 75982296 + 13.1 0.000 promoter-TSS (NM_003239) promoter-TSS (NM_003239) -169 NM_003239 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr10-1292 chr10 33273335 33273545 + 13.1 0.000 intron (NM_001244973, intron 2 of 16) intron (NM_001244973, intron 2 of 16) 61227 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr17-1252 chr17 29433558 29433768 + 13.1 0.000 intron (NM_025142, intron 1 of 17) MER61A|LTR|ERV1 42738 NM_020791 57551 Hs.597434 NM_020791 ENSG00000160551 TAOK1 KFC-B|MAP3K16|MARKK|PSK-2|PSK2|TAO1|hKFC-B|hTAOK1 TAO kinase 1 protein-coding chr13-458 chr13 23559034 23559244 + 13.1 0.000 Intergenic Intergenic -11231 NM_001204459 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr9-2727 chr9 92774498 92774708 + 13.1 0.000 Intergenic L1M4a2|LINE|L1 -9770 NM_015250 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chr22-1015 chr22 24285331 24285541 + 13.1 0.000 intron (NM_015330, intron 2 of 16) MIRb|SINE|MIR 14605 NM_015330 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr4-2921 chr4 88765775 88765985 + 13.1 0.000 intron (NM_001015045, intron 7 of 17) intron (NM_001015045, intron 7 of 17) 56091 NR_002806 285512 Hs.744957 NR_002806 ENSG00000248019 FAM13A-AS1 FAM13A1OS|FAM13AOS|NCRNA00039 FAM13A antisense RNA 1 ncRNA chr2-2386 chr2 9264325 9264535 + 13.1 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 57618 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr8-1209 chr8 96099638 96099848 + 13.1 0.000 Intergenic Intergenic 61063 NM_001001557 392255 Hs.492277 NM_001001557 ENSG00000156466 GDF6 BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|SGM1|SYNS4 growth differentiation factor 6 protein-coding chr12-3925 chr12 132405304 132405514 + 13.1 0.000 Intergenic Intergenic 75559 NR_120467 101928416 NR_120467 ENSG00000255916 LOC101928416 - uncharacterized LOC101928416 ncRNA chr15-723 chr15 60388655 60388865 + 13.1 0.000 intron (NM_004039, intron 1 of 12) AluJo|SINE|Alu 9226 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr14-842 chr14 92553514 92553724 + 13.1 0.000 intron (NM_024832, intron 1 of 9) intron (NM_024832, intron 1 of 9) -22615 NM_001319987 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr17-2561 chr17 50790085 50790295 + 13.1 0.000 Intergenic Intergenic 21540 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr4-2306 chr4 65791789 65791999 + 13.1 0.000 Intergenic MLT2F|LTR|ERVL -121399 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr5-1619 chr5 74686211 74686421 + 13.1 0.000 intron (NM_000521, intron 1 of 13) intron (NM_000521, intron 1 of 13) 1083 NM_000521 3074 Hs.69293 NM_000521 ENSG00000049860 HEXB ENC-1AS|HEL-248|HEL-S-111 hexosaminidase subunit beta protein-coding chr10-2097 chr10 123821224 123821434 + 13.1 0.000 intron (NM_198148, intron 4 of 13) intron (NM_198148, intron 4 of 13) 70478 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr9-1601 chr9 116471393 116471603 + 13.1 0.000 intron (NM_014010, intron 19 of 21) intron (NM_014010, intron 19 of 21) -32785 NR_033973 100128505 Hs.675821 NR_033973 ENSG00000229105 ASTN2-AS1 - ASTN2 antisense RNA 1 ncRNA chr20-1961 chr20 34841476 34841686 + 13.1 0.000 Intergenic L1ME4b|LINE|L1 -7119 NR_002165 128872 Hs.558624 NR_002165 HMGB3P1 HMG4L|HMGB3L1|dJ18C9.3 high mobility group box 3 pseudogene 1 pseudo chr19-2795 chr19 47232691 47232901 + 13.1 0.000 promoter-TSS (NM_001127240) promoter-TSS (NM_001127240) -129 NM_001127242 27113 Hs.467020 NM_014417 ENSG00000105327 BBC3 JFY-1|JFY1|PUMA BCL2 binding component 3 protein-coding chr1-4279 chr1 12106758 12106968 + 13.1 0.000 intron (NM_001243, intron 4 of 14) MIR3|SINE|MIR 43486 NM_001281430 943 Hs.1314 NM_001243 ENSG00000120949 TNFRSF8 CD30|D1S166E|Ki-1 TNF receptor superfamily member 8 protein-coding chr8-2854 chr8 133526666 133526876 + 13.1 0.000 intron (NM_003033, intron 2 of 8) intron (NM_003033, intron 2 of 8) 45116 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chrX-258 chrX 49922468 49922678 + 13.1 0.000 promoter-TSS (NM_001127898) promoter-TSS (NM_001127898) -23 NM_001127899 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr1-4698 chr1 236403753 236403963 + 13.1 0.000 intron (NM_080738, intron 1 of 5) intron (NM_080738, intron 1 of 5) 8445 NM_080738 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr1-2200 chr1 63714280 63714490 + 13.1 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -59632 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr12-2005 chr12 9283826 9284036 + 13.1 0.000 intron (NR_024374, intron 1 of 21) CpG 274 NR_024374 642846 Hs.447869 NR_024374 LOC642846 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like ncRNA chr11-4522 chr11 117681917 117682127 + 13.1 0.000 intron (NM_020693, intron 3 of 32) L2|LINE|L2 115194 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr19-1604 chr19 35168374 35168584 + 13.1 0.000 intron (NM_001320912, intron 8 of 8) L2b|LINE|L2 13744 NM_001320913 53827 Hs.333418 NM_014164 ENSG00000089327 FXYD5 DYSAD|HSPC113|IWU1|KCT1|OIT2|PRO6241|RIC FXYD domain containing ion transport regulator 5 protein-coding chr16-2773 chr16 12874317 12874527 + 13.1 0.000 Intergenic Intergenic -27176 NM_001145205 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr9-2823 chr9 125389006 125389216 + 13.1 0.000 Intergenic Intergenic 127285 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr6-1636 chr6 112222575 112222785 + 13.1 0.000 intron (NM_001105206, intron 2 of 38) intron (NM_001105206, intron 2 of 38) -13916 NR_121193 101927640 Hs.510007 NR_121193 LOC101927640 - uncharacterized LOC101927640 ncRNA chr12-755 chr12 57452950 57453160 + 13.1 0.000 TTS (NM_005538) TTS (NM_005538) -2252 NM_031479 83729 Hs.632713 NM_031479 ENSG00000139269 INHBE - inhibin subunit beta E protein-coding chr11-4755 chr11 111694807 111695017 + 13.1 0.000 intron (NM_015191, intron 4 of 14) intron (NM_015191, intron 4 of 14) 71477 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr8-928 chr8 23547836 23548046 + 13.1 0.000 intron (NM_001317813, intron 2 of 4) intron (NM_001317813, intron 2 of 4) 18985 NM_016612 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr8-777 chr8 41995276 41995486 + 13.1 0.000 intron (NM_001305878, intron 2 of 13) intron (NM_001305878, intron 2 of 13) -56369 NR_136589 105379393 Hs.742878 NR_136589 LOC105379393 - uncharacterized LOC105379393 ncRNA chr12-6552 chr12 118015370 118015580 + 13.1 0.000 Intergenic Intergenic -1186 NM_001346815 5985 Hs.731908 NM_007370 ENSG00000111445 RFC5 RFC36 replication factor C subunit 5 protein-coding chr20-617 chr20 17911222 17911432 + 13.1 0.000 Intergenic MER66D|LTR|ERV1 51619 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr18-679 chr18 62452318 62452528 + 13.1 0.000 Intergenic Intergenic -70602 NM_017742 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr13-876 chr13 30873180 30873390 + 13.1 0.000 Intergenic Intergenic -9277 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr10-2831 chr10 28948176 28948386 + 13.1 0.000 Intergenic MIRb|SINE|MIR 101873 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr12-1660 chr12 52146565 52146775 + 13.1 0.000 Intergenic Intergenic 45344 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr16-2405 chr16 70652442 70652652 + 13.1 0.000 intron (NM_152456, intron 2 of 6) intron (NM_152456, intron 2 of 6) 28555 NM_001172772 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr14-1521 chr14 55336244 55336454 + 13.1 0.000 intron (NM_152231, intron 1 of 1) intron (NM_152231, intron 1 of 1) 64195 NM_152231 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr2-4645 chr2 183296636 183296846 + 13.1 0.000 Intergenic L1PA7|LINE|L1 172298 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr7-2594 chr7 135710729 135710939 + 13.1 0.000 intron (NM_001318192, intron 2 of 15) intron (NM_001318192, intron 2 of 15) 17352 NM_012450 26266 Hs.490241 NM_012450 ENSG00000164707 SLC13A4 NAS2|SUT-1|SUT1 solute carrier family 13 member 4 protein-coding chr10-1280 chr10 26694638 26694848 + 13.1 0.000 Intergenic Intergenic -2681 NM_001321978 23590 Hs.558468 NM_014317 ENSG00000148459 PDSS1 COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 decaprenyl diphosphate synthase subunit 1 protein-coding chr1-2325 chr1 170592865 170593075 + 13.1 0.000 Intergenic Intergenic -60361 NR_125958 101928650 Hs.676662 NR_125958 GORAB-AS1 - GORAB antisense RNA 1 ncRNA chr19-2098 chr19 343072 343282 + 13.1 0.000 intron (NM_017550, intron 1 of 13) intron (NM_017550, intron 1 of 13) 1664 NM_001346105 54531 Hs.101891 NM_017550 ENSG00000105556 MIER2 KIAA1193|Mi-er2 MIER family member 2 protein-coding chr8-1931 chr8 41817531 41817741 + 13.1 0.000 intron (NM_001142446, intron 1 of 42) MER34-int|LTR|ERV1 -20014 NM_020476 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr16-1627 chr16 813313 813523 + 13.1 0.000 exon (NM_001013638, exon 3 of 3) exon (NM_001013638, exon 3 of 3) 7975 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr10-1255 chr10 102691780 102691990 + 13.1 0.000 intron (NM_004311, intron 3 of 5) intron (NM_004311, intron 3 of 5) 22512 NM_004311 403 Hs.182215 NM_004311 ENSG00000138175 ARL3 ARFL3|JBTS35|RP83 ADP ribosylation factor like GTPase 3 protein-coding chr3-5361 chr3 145672772 145672982 + 13.1 0.000 Intergenic Intergenic 396308 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr10-2932 chr10 13757534 13757744 + 13.1 0.000 intron (NM_001318336, intron 7 of 23) intron (NM_001318336, intron 7 of 23) -50072 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr4-4382 chr4 41038573 41038783 + 13.1 0.000 intron (NM_001330658, intron 3 of 15) intron (NM_001330658, intron 3 of 15) 175864 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr3-2845 chr3 29694868 29695078 + 13.1 0.000 intron (NM_001003792, intron 4 of 13) intron (NM_001003792, intron 4 of 13) 239183 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr6-2939 chr6 27838429 27838639 + 13.1 0.000 promoter-TSS (NM_003520) promoter-TSS (NM_003520) -128 NM_003520 8341 Hs.534368 NM_003520 ENSG00000233822 HIST1H2BN H2B/d|H2BFD histone cluster 1 H2B family member n protein-coding chr19-1878 chr19 33248122 33248332 + 13.1 0.000 Intergenic Intergenic -22377 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr10-1315 chr10 73836698 73836908 + 13.1 0.000 intron (NM_001367518, intron 13 of 20) intron (NM_001367518, intron 13 of 20) -24983 NR_160744 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr2-2096 chr2 238166932 238167142 + 13.1 0.000 exon (NM_001291832, exon 8 of 8) exon (NM_001291832, exon 8 of 8) 8067 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr1-2922 chr1 30798373 30798583 + 13.1 0.000 Intergenic MER102b|DNA|hAT-Charlie -26174 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr17-1391 chr17 28946352 28946562 + 13.1 0.000 intron (NM_001033561, intron 2 of 14) intron (NM_001033561, intron 2 of 14) 5061 NM_001033561 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr8-1603 chr8 143181309 143181519 + 13.1 0.000 Intergenic L1MC5a|LINE|L1 -20760 NM_001130478 4062 Hs.159590 NM_002347 ENSG00000176956 LY6H NMLY6 lymphocyte antigen 6 family member H protein-coding chr5-1467 chr5 73371472 73371682 + 13.1 0.000 Intergenic Intergenic 33671 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr9-738 chr9 135906606 135906816 + 13.1 0.000 intron (NM_015447, intron 1 of 16) CpG 835 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr11-923 chr11 6319781 6319991 + 13.1 0.000 intron (NM_145040, intron 1 of 1) G-rich|Low_complexity|Low_complexity 615 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr10-3689 chr10 104192781 104192991 + 13.1 0.000 intron (NM_025145, intron 11 of 37) MIRc|SINE|MIR 25997 NR_030340 693194 NR_030340 ENSG00000208033 MIR609 MIRN609|hsa-mir-609 microRNA 609 ncRNA chr15-737 chr15 88913281 88913491 + 13.1 0.000 promoter-TSS (NM_001310321) promoter-TSS (NM_001310321) -7 NM_005928 4240 Hs.3745 NM_005928 ENSG00000140545 MFGE8 BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47 milk fat globule-EGF factor 8 protein protein-coding chr13-1522 chr13 24288328 24288538 + 13.1 0.000 intron (NM_001286795, intron 4 of 9) intron (NM_001286795, intron 4 of 9) 17683 NM_001286795 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr4-5955 chr4 164439853 164440063 + 13.1 0.000 Intergenic Intergenic -56703 NM_001166373 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr6-1109 chr6 116370560 116370770 + 13.1 0.000 promoter-TSS (NM_001322943) promoter-TSS (NM_001322943) -282 NM_001322943 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr12-1251 chr12 47988337 47988547 + 13.1 0.000 intron (NM_033150, intron 17 of 52) intron (NM_033150, intron 17 of 52) 16034 NM_001844 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr16-1547 chr16 71840378 71840588 + 13.1 0.000 Intergenic Intergenic -5493 NM_001137675 342371 Hs.743239 NM_001137675 ENSG00000224470 ATXN1L BOAT|BOAT1 ataxin 1 like protein-coding chr3-3854 chr3 36494796 36495006 + 13.1 0.000 intron (NM_001292049, intron 4 of 8) intron (NM_001292049, intron 4 of 8) 114414 NM_003149 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr3-2485 chr3 141687112 141687322 + 13.1 0.000 intron (NR_136190, intron 5 of 7) intron (NR_136190, intron 5 of 7) 24018 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr7-896 chr7 28409097 28409307 + 13.1 0.000 intron (NM_182899, intron 1 of 9) CpG -3316 NM_182898 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr20-1617 chr20 12835739 12835949 + 13.1 0.000 Intergenic Intergenic 101119 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr8-1231 chr8 119586025 119586235 + 13.1 0.000 intron (NM_001330600, intron 15 of 25) intron (NM_001330600, intron 15 of 25) 6878 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr3-2603 chr3 158847550 158847760 + 13.1 0.000 Intergenic Intergenic 45601 NR_110328 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr7-1739 chr7 28166505 28166715 + 13.1 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -13847 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr11-2281 chr11 5788496 5788706 + 13.1 0.000 exon (NM_001001913, exon 1 of 1) exon (NM_001001913, exon 1 of 1) 215 NM_001001913 79473 Hs.690209 NM_001001913 ENSG00000181001 OR52N1 OR11-61 olfactory receptor family 52 subfamily N member 1 protein-coding chr22-911 chr22 29443390 29443600 + 13.1 0.000 Intergenic L1MC2|LINE|L1 -1366 NR_002727 10740 Hs.167750 NR_002727 RFPL1S NCRNA00006|RFPL1-AS|RFPL1-AS1|RFPL1AS RFPL1 antisense RNA 1 ncRNA chr17-1222 chr17 43530381 43530591 + 13.1 0.000 promoter-TSS (NM_001261439) promoter-TSS (NM_001261439) -51 NM_001261439 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chrX-681 chrX 17591353 17591563 + 13.1 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -32331 NR_046632 100873920 Hs.584577 NR_046632 NHS-AS1 - NHS antisense RNA 1 ncRNA chr14-475 chr14 41606927 41607137 + 13.1 0.000 non-coding (NR_144388, exon 1 of 6) non-coding (NR_144388, exon 1 of 6) 176 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr10-2667 chr10 97104361 97104571 + 13.1 0.000 TTS (NR_038330) TTS (NR_038330) 1710 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr1-6686 chr1 53246653 53246863 + 13.1 0.000 3' UTR (NM_017522, exon 16 of 16) 3' UTR (NM_017522, exon 16 of 16) 8148 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 - uncharacterized LOC100507564 ncRNA chr2-4673 chr2 205700864 205701074 + 13.1 0.000 intron (NM_018534, intron 2 of 15) intron (NM_018534, intron 2 of 15) 18468 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr2-3886 chr2 42545880 42546090 + 13.1 0.000 intron (NM_001282755, intron 2 of 17) intron (NM_001282755, intron 2 of 17) -22060 NM_001282756 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr10-2817 chr10 14571834 14572044 + 13.1 0.000 promoter-TSS (NM_001282701) promoter-TSS (NM_001282701) 60 NM_001282698 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr6-1551 chr6 112650508 112650718 + 13.1 0.000 Intergenic Intergenic 303283 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr9-1460 chr9 22211672 22211882 + 13.1 0.000 Intergenic Intergenic -202464 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr13-1327 chr13 26531087 26531297 + 13.1 0.000 Intergenic LTR48B|LTR|ERV1 -26491 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr10-1598 chr10 35912740 35912950 + 13.1 0.000 Intergenic Intergenic 134543 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr11-1613 chr11 60924409 60924619 + 13.1 0.000 promoter-TSS (NM_017870) promoter-TSS (NM_017870) 54 NM_017870 54972 Hs.118552 NM_017870 ENSG00000006118 TMEM132A GBP|HSPA5BP1 transmembrane protein 132A protein-coding chr5-1141 chr5 132426538 132426748 + 13.1 0.000 intron (NR_161242, intron 2 of 3) intron (NR_161242, intron 2 of 3) 15714 NR_161242 441108 Hs.658288 NM_001013717 C5orf56 - chromosome 5 open reading frame 56 ncRNA chr6-5170 chr6 127554557 127554767 + 13.1 0.000 Intergenic Intergenic -22512 NM_001010905 352999 Hs.226268 NM_001010905 ENSG00000184530 C6orf58 LEG1 chromosome 6 open reading frame 58 protein-coding chr3-2467 chr3 117997355 117997565 + 13.1 0.000 Intergenic CpG -306535 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr3-1837 chr3 70520353 70520563 + 13.1 0.000 Intergenic Intergenic -207820 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr2-5147 chr2 26961649 26961859 + 13.1 0.000 Intergenic Intergenic -8883 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr3-1327 chr3 52516038 52516248 + 13.1 0.000 exon (NM_015136, exon 38 of 69) exon (NM_015136, exon 38 of 69) 17714 NM_001134231 64943 Hs.84753 NM_022908 ENSG00000168268 NT5DC2 - 5'-nucleotidase domain containing 2 protein-coding chr1-3963 chr1 150009719 150009929 + 13.1 0.000 intron (NM_020205, intron 1 of 11) intron (NM_020205, intron 1 of 11) 902 NM_020205 56957 Hs.98322 NM_020205 ENSG00000264522 OTUD7B CEZANNE|ZA20D1 OTU deubiquitinase 7B protein-coding chr3-2759 chr3 144109984 144110194 + 13.1 0.000 Intergenic MER70C|LTR|ERVL 137008 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr15-1360 chr15 72475712 72475922 + 13.1 0.000 intron (NM_005744, intron 1 of 13) intron (NM_005744, intron 1 of 13) 1487 NM_005744 25820 Hs.268787 NM_005744 ENSG00000166233 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding chr17-5841 chr17 67037129 67037339 + 13.1 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -7320 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr20-1854 chr20 31632927 31633137 + 13.1 0.000 Intergenic Intergenic -4880 NM_032609 84701 Hs.277101 NM_032609 ENSG00000131055 COX4I2 COX4|COX4-2|COX4B|COX4L2|COXIV-2|dJ857M17.2 cytochrome c oxidase subunit 4I2 protein-coding chr5-1246 chr5 178199772 178199982 + 13.1 0.000 Intergenic Intergenic -4656 NM_004499 3182 Hs.591731 NM_004499 ENSG00000197451 HNRNPAB ABBP1|HNRPAB heterogeneous nuclear ribonucleoprotein A/B protein-coding chr4-1312 chr4 128872096 128872306 + 13.1 0.000 exon (NM_001287437, exon 11 of 11) exon (NM_001287437, exon 11 of 11) 60357 NM_001287443 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr12-1359 chr12 46224467 46224677 + 13.1 0.000 intron (NM_030674, intron 5 of 16) intron (NM_030674, intron 5 of 16) 41944 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr1-8478 chr1 117849462 117849672 + 13.1 0.000 Intergenic Intergenic 80054 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr2-2715 chr2 73110758 73110968 + 13.1 0.000 intron (NM_001371272, intron 1 of 5) intron (NM_001371272, intron 1 of 5) 2085 NM_001371272 chr19-2850 chr19 3888866 3889076 + 13.1 0.000 intron (NM_033064, intron 2 of 12) intron (NM_033064, intron 2 of 12) 8286 NM_033064 85300 Hs.418055 NM_033064 ENSG00000167654 ATCAY BNIP-H|CLAC ATCAY kinesin light chain interacting caytaxin protein-coding chr3-2868 chr3 45123246 45123456 + 13.1 0.000 intron (NM_178181, intron 1 of 3) intron (NM_178181, intron 1 of 3) 23027 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr11-3287 chr11 85740477 85740687 + 13.1 0.000 intron (NM_001365826, intron 4 of 18) intron (NM_001365826, intron 4 of 18) 17487 NM_001162953 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr9-998 chr9 32384638 32384848 + 13.1 0.000 promoter-TSS (NM_001362840) promoter-TSS (NM_001362840) 100 NM_001362840 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr6-1198 chr6 12011342 12011552 + 13.1 0.000 promoter-TSS (NM_002114) promoter-TSS (NM_002114) -865 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr19-1340 chr19 15432734 15432944 + 13.1 0.000 promoter-TSS (NM_001330395) promoter-TSS (NM_001330395) -305 NM_001330395 58525 Hs.442138 NM_021241 ENSG00000011451 WIZ ZNF803 WIZ zinc finger protein-coding chr10-1577 chr10 12448750 12448960 + 13.1 0.000 intron (NM_001351032, intron 3 of 11) intron (NM_001351032, intron 3 of 11) 59873 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr19-1347 chr19 33394353 33394563 + 13.1 0.000 intron (NM_001166056, intron 10 of 12) intron (NM_001166056, intron 10 of 12) 19934 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr14-995 chr14 100415974 100416184 + 13.1 0.000 intron (NM_001350949, intron 2 of 6) L2b|LINE|L2 39594 NM_024515 79446 Hs.497599 NM_024515 ENSG00000176473 WDR25 C14orf67 WD repeat domain 25 protein-coding chr21-527 chr21 37909573 37909783 + 13.1 0.000 intron (NM_002240, intron 1 of 3) MIRb|SINE|MIR 6779 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr8-1185 chr8 42214915 42215125 + 13.1 0.000 Intergenic Intergenic -7455 NM_033011 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr2-6044 chr2 120291435 120291645 + 13.1 0.000 intron (NM_001369400, intron 4 of 4) intron (NM_001369400, intron 4 of 4) 38688 NM_001369400 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr16-1191 chr16 8866407 8866617 + 13.1 0.000 intron (NM_001278260, intron 1 of 4) intron (NM_001278260, intron 1 of 4) 916 NM_001278264 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr10-1121 chr10 123583774 123583984 + 13.1 0.000 Intergenic Intergenic -82476 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr17-1170 chr17 41547971 41548181 + 13.1 0.000 Intergenic Intergenic 6419 NR_038442 147093 Hs.680576 NR_038442 ENSG00000226629 LINC00974 - long intergenic non-protein coding RNA 974 ncRNA chr16-1102 chr16 85999274 85999484 + 13.1 0.000 Intergenic Intergenic 81032 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr10-1547 chr10 98967670 98967880 + 13.1 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) -43207 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr7-4736 chr7 57443118 57443328 + 13.1 0.000 Intergenic Intergenic -6954 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr3-3703 chr3 170421326 170421536 + 13.1 0.000 intron (NM_001185056, intron 1 of 2) intron (NM_001185056, intron 1 of 2) 205 NM_001185056 5010 Hs.31595 NM_005602 ENSG00000013297 CLDN11 OSP|OTM claudin 11 protein-coding chr5-1553 chr5 65801465 65801675 + 13.1 0.000 intron (NM_020726, intron 9 of 12) intron (NM_020726, intron 9 of 12) 79365 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chr13-791 chr13 89940594 89940804 + 13.1 0.000 Intergenic Intergenic 179018 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr1-2018 chr1 112502018 112502228 + 13.1 0.000 intron (NM_004185, intron 2 of 5) CpG -6842 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr1-3245 chr1 201877924 201878134 + 13.1 0.000 3' UTR (NM_018085, exon 24 of 24) 3' UTR (NM_018085, exon 24 of 24) -10640 NR_030775 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr9-2678 chr9 70021400 70021610 + 13.1 0.000 Intergenic Intergenic -22076 NR_125850 256691 Hs.547172 NM_153267 ENSG00000165072 MAMDC2 - MAM domain containing 2 protein-coding chr9-4472 chr9 33051446 33051656 + 13.1 0.000 intron (NM_018225, intron 10 of 11) L1MC1|LINE|L1 25123 NM_018225 55234 Hs.655351 NM_018225 ENSG00000122692 SMU1 BWD|SMU-1|fSAP57 SMU1 DNA replication regulator and spliceosomal factor protein-coding chr19-1848 chr19 12779126 12779336 + 13.1 0.000 Intergenic Intergenic -3679 NM_001100176 29911 Hs.30792 NM_013312 ENSG00000095066 HOOK2 HK2 hook microtubule tethering protein 2 protein-coding chr6-692 chr6 28489895 28490105 + 13.1 0.000 Intergenic G-rich|Low_complexity|Low_complexity 25793 NM_182701 257202 Hs.448570 NM_182701 ENSG00000198704 GPX6 GPX5p|GPXP3|GPx-6|GSHPx-6|dJ1186N24|dJ1186N24.1 glutathione peroxidase 6 protein-coding chr12-3552 chr12 1201989 1202199 + 13.1 0.000 intron (NM_001301248, intron 11 of 18) intron (NM_001301248, intron 11 of 18) 174346 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr4-3088 chr4 151107263 151107473 + 13.1 0.000 Intergenic AluJr|SINE|Alu 3541 NR_000007 8944 NR_000007 ENSG00000208797 SNORD73A RNU73|RNU73A|U73|U73a small nucleolar RNA, C/D box 73A snoRNA chr9-1800 chr9 36835727 36835937 + 13.1 0.000 non-coding (NR_104000, exon 10 of 10) non-coding (NR_104000, exon 10 of 10) -12233 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr20-940 chr20 23399714 23399924 + 13.1 0.000 intron (NM_001283018, intron 2 of 10) intron (NM_001283018, intron 2 of 10) 21669 NR_104266 63908 Hs.269471 NM_022080 ENSG00000125814 NAPB SNAP-BETA|SNAPB NSF attachment protein beta protein-coding chr12-2092 chr12 46984001 46984211 + 13.1 0.000 Intergenic L1PA8|LINE|L1 -95497 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chr20-927 chr20 5657465 5657675 + 13.1 0.000 Intergenic Intergenic -46564 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr16-5798 chr16 89461308 89461518 + 13.1 0.000 intron (NM_001256182, intron 1 of 13) L1MB3|LINE|L1 29148 NR_045839 29123 Hs.335003 NM_013275 ENSG00000167522 ANKRD11 ANCO-1|ANCO1|LZ16|T13 ankyrin repeat domain 11 protein-coding chr3-2965 chr3 71684903 71685113 + 13.1 0.000 intron (NM_173359, intron 7 of 7) intron (NM_173359, intron 7 of 7) 40394 NM_001134651 317649 Hs.581355 NM_173359 ENSG00000163412 EIF4E3 eIF-4E3|eIF4E-3 eukaryotic translation initiation factor 4E family member 3 protein-coding chr14-689 chr14 103551025 103551235 + 13.1 0.000 Intergenic Intergenic 11190 NM_001015049 9529 Hs.5443 NM_004873 ENSG00000166170 BAG5 BAG-5 BCL2 associated athanogene 5 protein-coding chr2-3318 chr2 148544062 148544272 + 13.1 0.000 Intergenic L1MC5|LINE|L1 -100584 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr3-1366 chr3 32340520 32340730 + 13.1 0.000 intron (NM_001320308, intron 1 of 2) MER58A|DNA|hAT-Charlie -51228 NM_138410 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr11-3392 chr11 132047210 132047420 + 13.1 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 136497 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr4-3199 chr4 17272131 17272341 + 13.1 0.000 Intergenic Intergenic 48646 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr3-2719 chr3 87982614 87982824 + 13.1 0.000 intron (NM_000866, intron 1 of 1) MLT1H-int|LTR|ERVL-MaLR 143 NM_000866 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr2-2007 chr2 69549480 69549690 + 13.1 0.000 intron (NM_014911, intron 3 of 21) CR1-3_Croc|LINE|CR1 -29414 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr3-1808 chr3 47405148 47405358 + 13.1 0.000 intron (NM_015466, intron 4 of 24) intron (NM_015466, intron 4 of 24) 24232 NM_001304482 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr6-2315 chr6 111416680 111416890 + 13.1 0.000 intron (NM_002912, intron 2 of 32) intron (NM_002912, intron 2 of 32) -66687 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr3-5449 chr3 178946392 178946602 + 13.1 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -86092 NR_126560 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr9-2078 chr9 71680247 71680457 + 13.1 0.000 Intergenic Intergenic 88161 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr10-1431 chr10 23440375 23440585 + 13.1 0.000 exon (NM_001145373, exon 1 of 1) exon (NM_001145373, exon 1 of 1) 1211 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr16-1081 chr16 65123522 65123732 + 13.1 0.000 Intergenic CpG-9789 -1564 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr11-2201 chr11 46858454 46858664 + 13.1 0.000 3' UTR (NM_002334, exon 38 of 38) 3' UTR (NM_002334, exon 38 of 38) 12148 NR_038909 100507401 Hs.675301 NR_038909 ENSG00000247675 LRP4-AS1 - LRP4 antisense RNA 1 ncRNA chr9-2675 chr9 62882878 62883088 + 13.1 0.000 intron (NR_122076, intron 1 of 5) intron (NR_122076, intron 1 of 5) -14393 NR_126047 728673 Hs.380240 NR_126047 ENSG00000170161 LOC728673 - uncharacterized LOC728673 ncRNA chr11-1709 chr11 73399236 73399446 + 13.1 0.000 Intergenic Intergenic 22673 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr11-2231 chr11 67311737 67311947 + 13.1 0.000 exon (NM_017857, exon 14 of 14) exon (NM_017857, exon 14 of 14) -5997 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 - uncharacterized LOC100130987 ncRNA chr9-2560 chr9 133844833 133845043 + 13.1 0.000 intron (NM_001134398, intron 3 of 29) intron (NM_001134398, intron 3 of 29) -104983 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-4876 chr1 33048349 33048559 + 13.1 0.000 Intergenic MIRc|SINE|MIR -11543 NM_001319140 204 Hs.470907 NM_001625 ENSG00000004455 AK2 ADK2 adenylate kinase 2 protein-coding chr2-2776 chr2 235639368 235639578 + 13.1 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -121552 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr2-2284 chr2 37566721 37566931 + 13.1 0.000 Intergenic Intergenic 105373 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr14-1552 chr14 67693013 67693223 + 13.1 0.000 intron (NM_016026, intron 1 of 6) intron (NM_016026, intron 1 of 6) 2646 NM_001252650 51109 Hs.719925 NM_016026 ENSG00000072042 RDH11 ARSDR1|CGI82|HCBP12|MDT1|PSDR1|RALR1|RDJCSS|SCALD|SDR7C1 retinol dehydrogenase 11 protein-coding chr7-2186 chr7 92695965 92696175 + 13.1 0.000 intron (NM_001259, intron 4 of 7) intron (NM_001259, intron 4 of 7) -105680 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr6-1985 chr6 3517758 3517968 + 13.1 0.000 Intergenic Intergenic -61304 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr4-788 chr4 3477880 3478090 + 13.1 0.000 intron (NM_173660, intron 4 of 6) intron (NM_173660, intron 4 of 6) -6559 NM_001256896 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr15-3005 chr15 55616490 55616700 + 13.1 0.000 3' UTR (NM_173814, exon 20 of 20) 3' UTR (NM_173814, exon 20 of 20) -27624 NM_015617 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr7-3786 chr7 86355792 86356002 + 13.1 0.000 Intergenic L1MC1|LINE|L1 -288012 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chr2-4939 chr2 173049233 173049443 + 13.1 0.000 intron (NM_001282901, intron 24 of 24) intron (NM_001282901, intron 24 of 24) -26508 NM_133646 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr5-3212 chr5 83512440 83512650 + 13.1 0.000 intron (NM_001126336, intron 6 of 12) intron (NM_001126336, intron 6 of 12) 40801 NM_004385 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr2-965 chr2 218672011 218672221 + 13.1 0.000 promoter-TSS (NM_001243313) promoter-TSS (NM_001243313) 30 NM_001243313 27148 Hs.471404 NM_015690 ENSG00000163482 STK36 FU serine/threonine kinase 36 protein-coding chr11-3338 chr11 118174904 118175114 + 13.1 0.000 intron (NM_004588, intron 1 of 3) intron (NM_004588, intron 1 of 3) 1630 NM_004588 6327 Hs.129783 NM_004588 ENSG00000149575 SCN2B ATFB14 sodium voltage-gated channel beta subunit 2 protein-coding chr19-2787 chr19 46357685 46357895 + 13.1 0.000 intron (NM_001204284, intron 2 of 11) MER21B|LTR|ERVL 10703 NM_006247 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr12-2723 chr12 2784058 2784268 + 13.1 0.000 intron (NR_146317, intron 2 of 3) intron (NR_146317, intron 2 of 3) -10807 NM_002014 2288 Hs.524183 NM_002014 ENSG00000004478 FKBP4 FKBP51|FKBP52|FKBP59|HBI|Hsp56|PPIase|p52 FKBP prolyl isomerase 4 protein-coding chr5-1716 chr5 136802487 136802697 + 13.1 0.000 Intergenic Intergenic -325605 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr2-1613 chr2 201125634 201125844 + 13.1 0.000 intron (NM_001351593, intron 1 of 8) intron (NM_001351593, intron 1 of 8) -3226 NM_001308042 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS|cFLIP CASP8 and FADD like apoptosis regulator protein-coding chr11-998 chr11 1487937 1488147 + 13.1 0.000 Intergenic Intergenic -1263 NM_001172223 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr6-1039 chr6 157922075 157922285 + 13.1 0.000 intron (NM_016224, intron 10 of 17) intron (NM_016224, intron 10 of 17) -59683 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr9-1498 chr9 136476988 136477198 + 13.1 0.000 exon (NM_001276418, exon 2 of 29) exon (NM_001276418, exon 2 of 29) -5917 NM_152571 158055 Hs.212613 NM_152571 C9orf163 - chromosome 9 open reading frame 163 protein-coding chr3-1734 chr3 128081827 128082037 + 13.1 0.000 intron (NM_001319084, intron 9 of 9) intron (NM_001319084, intron 9 of 9) 6122 NR_046645 100874089 Hs.581603 NR_046645 ENSG00000239608 RUVBL1-AS1 - RUVBL1 antisense RNA 1 ncRNA chr2-3219 chr2 225103748 225103958 + 13.1 0.000 Intergenic MER81|DNA|hAT-Blackjack -61385 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr15-763 chr15 70467081 70467291 + 13.1 0.000 Intergenic Intergenic 38742 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr2-9521 chr2 237996044 237996254 + 13.1 0.000 intron (NR_037904, intron 4 of 18) Tigger15a|DNA|TcMar-Tigger 27356 NM_001278305 140739 Hs.471785 NM_080678 ENSG00000184182 UBE2F NCE2 ubiquitin conjugating enzyme E2 F (putative) protein-coding chr7-2848 chr7 105097663 105097873 + 13.1 0.000 intron (NM_182931, intron 15 of 26) intron (NM_182931, intron 15 of 26) 83563 NM_182931 55904 Hs.592262 NM_018682 ENSG00000005483 KMT2E HDCMC04P|MLL5|NKp44L lysine methyltransferase 2E protein-coding chr2-3535 chr2 1593942 1594152 + 13.1 0.000 Intergenic Intergenic 150468 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr19-1061 chr19 35868421 35868631 + 13.1 0.000 promoter-TSS (NM_005166) promoter-TSS (NM_005166) 81 NM_005166 333 Hs.74565 NM_005166 ENSG00000105290 APLP1 APLP amyloid beta precursor like protein 1 protein-coding chr20-1717 chr20 39829710 39829920 + 13.1 0.000 Intergenic Intergenic -174646 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr5-3290 chr5 118025248 118025458 + 13.1 0.000 intron (NR_104997, intron 2 of 2) intron (NR_104997, intron 2 of 2) -257221 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr9-1118 chr9 93119956 93120166 + 13.1 0.000 Intergenic Intergenic 14190 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr22-1401 chr22 38788509 38788719 + 13.1 0.000 intron (NM_005740, intron 1 of 3) intron (NM_005740, intron 1 of 3) 5529 NM_005740 10126 Hs.632766 NM_005740 ENSG00000100246 DNAL4 MRMV3|PIG27 dynein axonemal light chain 4 protein-coding chr4-1496 chr4 42626807 42627017 + 13.1 0.000 intron (NM_001105529, intron 2 of 35) intron (NM_001105529, intron 2 of 35) 30193 NM_006095 10396 Hs.435052 NM_006095 ENSG00000124406 ATP8A1 ATPASEII|ATPIA|ATPP2 ATPase phospholipid transporting 8A1 protein-coding chr14-2011 chr14 57492868 57493078 + 13.1 0.000 intron (NM_001283060, intron 1 of 5) intron (NM_001283060, intron 1 of 5) 884 NM_001283060 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr13-1605 chr13 45511556 45511766 + 13.1 0.000 intron (NM_031431, intron 15 of 22) intron (NM_031431, intron 15 of 22) 46722 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chr1-2369 chr1 67833170 67833380 + 13.1 0.000 intron (NR_040077, intron 1 of 9) CpG 192 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr6-1194 chr6 1131752 1131962 + 13.1 0.000 Intergenic Intergenic -30525 NR_027116 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr3-4849 chr3 155682003 155682213 + 13.1 0.000 intron (NM_001349252, intron 2 of 24) intron (NM_001349252, intron 2 of 24) -5765 NM_001130961 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr9-1912 chr9 135766026 135766236 + 13.1 0.000 intron (NM_001272003, intron 12 of 30) intron (NM_001272003, intron 12 of 30) 63946 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr15-1664 chr15 38616292 38616502 + 13.1 0.000 Intergenic Intergenic -51583 NM_001128602 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr9-3832 chr9 130107616 130107826 + 13.1 0.000 intron (NM_020960, intron 14 of 17) intron (NM_020960, intron 14 of 17) 36498 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr7-1817 chr7 102927467 102927677 + 13.1 0.000 intron (NR_105043, intron 10 of 20) intron (NR_105043, intron 10 of 20) 14572 NM_005824 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr17-1518 chr17 61493212 61493422 + 13.1 0.000 Intergenic Intergenic 36829 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr6-3299 chr6 158475187 158475397 + 13.1 0.000 intron (NM_020245, intron 6 of 13) intron (NM_020245, intron 6 of 13) -61144 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr15-2947 chr15 48547355 48547565 + 13.1 0.000 intron (NM_000138, intron 6 of 65) intron (NM_000138, intron 6 of 65) 98328 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr2-3220 chr2 226048777 226048987 + 13.1 0.000 Intergenic Intergenic -93912 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr1-2237 chr1 164637581 164637791 + 13.1 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 77964 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr2-2902 chr2 222862232 222862442 + 13.1 0.000 intron (NM_001354159, intron 1 of 14) MIR|SINE|MIR 1301 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr11-1396 chr11 2171746 2171956 + 13.1 0.000 promoter-TSS (NM_000360) promoter-TSS (NM_000360) -36 NM_000360 7054 Hs.435609 NM_000360 ENSG00000180176 TH DYT14|DYT5b|TYH tyrosine hydroxylase protein-coding chr4-369 chr4 8428314 8428524 + 13.1 0.000 intron (NM_003501, intron 1 of 17) CpG 12304 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr1-2935 chr1 48916280 48916490 + 13.1 0.000 intron (NM_001323575, intron 5 of 12) intron (NM_001323575, intron 5 of 12) -139416 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr8-1540 chr8 100493496 100493706 + 13.1 0.000 Intergenic MIRb|SINE|MIR 66158 NM_001270378 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr15-494 chr15 67433606 67433816 + 13.1 0.000 intron (NR_040052, intron 3 of 5) intron (NR_040052, intron 3 of 5) 87262 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr1-4409 chr1 201760453 201760663 + 13.1 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 20658 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr11-3537 chr11 14241813 14242023 + 13.1 0.000 intron (NM_006108, intron 6 of 15) intron (NM_006108, intron 6 of 15) 116567 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr8-1890 chr8 23319470 23319680 + 13.1 0.000 intron (NM_002318, intron 8 of 13) intron (NM_002318, intron 8 of 13) -16633 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr12-4473 chr12 16145786 16145996 + 13.1 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 131794 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding chr1-3708 chr1 205611286 205611496 + 13.1 0.000 3' UTR (NM_001973, exon 5 of 5) 3' UTR (NM_001973, exon 5 of 5) 21481 NM_021795 2005 Hs.497520 NM_001973 ENSG00000158711 ELK4 SAP1 ETS transcription factor ELK4 protein-coding chr19-2520 chr19 17824467 17824677 + 13.1 0.000 TTS (NM_000215) TTS (NM_000215) -3053 NM_005543 3640 Hs.37062 NM_005543 ENSG00000248099 INSL3 RLF|RLNL|ley-I-L insulin like 3 protein-coding chr3-1623 chr3 52062777 52062987 + 13.1 0.000 non-coding (NR_027331, exon 1 of 1) non-coding (NR_027331, exon 1 of 1) 2230 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA chr6-831 chr6 144285079 144285289 + 13.1 0.000 Intergenic CpG -6553 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr5-3370 chr5 138623174 138623384 + 13.1 0.000 Intergenic AluJb|SINE|Alu -47878 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr4-1092 chr4 168480276 168480486 + 13.1 0.000 5' UTR (NM_001291510, exon 1 of 30) 5' UTR (NM_001291510, exon 1 of 30) 111 NM_001345927 91351 Hs.535011 NM_001012967 ENSG00000181381 DDX60L - DExD/H-box 60 like protein-coding chr10-2819 chr10 15472139 15472349 + 13.1 0.000 Intergenic Intergenic -100955 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr12-2439 chr12 52004175 52004385 + 13.1 0.000 Intergenic Intergenic -2666 NM_181711 160622 Hs.407202 NM_181711 ENSG00000161835 GRASP TAMALIN general receptor for phosphoinositides 1 associated scaffold protein protein-coding chr7-1557 chr7 32616645 32616855 + 13.1 0.000 intron (NR_036680, intron 12 of 16) MLT1F|LTR|ERVL-MaLR 102418 NR_036680 100129460 Hs.633705 NR_036680 DPY19L1P1 - DPY19L1 pseudogene 1 pseudo chr11-3927 chr11 126660262 126660472 + 13.1 0.000 intron (NR_120533, intron 1 of 1) Tigger19a|DNA|TcMar-Tigger 4281 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr9-1603 chr9 121332006 121332216 + 13.1 0.000 intron (NM_000177, intron 16 of 16) intron (NM_000177, intron 16 of 16) 32280 NM_000177 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr13-2288 chr13 29564044 29564254 + 13.1 0.000 intron (NM_003045, intron 1 of 12) intron (NM_003045, intron 1 of 12) 31539 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr1-5972 chr1 33944046 33944256 + 13.1 0.000 intron (NM_052896, intron 3 of 69) MER58A|DNA|hAT-Charlie 75195 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr7-3867 chr7 104810762 104810972 + 13.1 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) -6775 NR_034141 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr14-2050 chr14 65180385 65180595 + 13.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 41857 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr5-798 chr5 52989318 52989528 + 13.1 0.000 promoter-TSS (NR_073107) promoter-TSS (NR_073107) 71 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr20-697 chr20 8837490 8837700 + 13.1 0.000 intron (NM_182734, intron 32 of 32) ERVL-B4-int|LTR|ERVL 6410 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr17-3996 chr17 68468043 68468253 + 13.1 0.000 intron (NM_001278433, intron 1 of 10) intron (NM_001278433, intron 1 of 10) -10624 NM_001320772 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding chr22-861 chr22 36259412 36259622 + 13.1 0.000 intron (NM_145343, intron 5 of 6) intron (NM_145343, intron 5 of 6) 6384 NM_003661 8542 Hs.114309 NM_003661 ENSG00000100342 APOL1 APO-L|APOL|APOL-I|FSGS4 apolipoprotein L1 protein-coding chr1-4691 chr1 230084585 230084795 + 13.1 0.000 intron (NM_004481, intron 1 of 15) intron (NM_004481, intron 1 of 15) 17452 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr17-3383 chr17 82509975 82510185 + 13.1 0.000 Intergenic AluJo|SINE|Alu -9652 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr6-766 chr6 166515323 166515533 + 13.1 0.000 intron (NM_001006932, intron 4 of 21) intron (NM_001006932, intron 4 of 21) -5995 NR_031734 100302141 NR_031734 ENSG00000222958 MIR1913 MIRN1913|hsa-mir-1913 microRNA 1913 ncRNA chr5-3406 chr5 145847825 145848035 + 13.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -12588 NM_138492 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr2-3037 chr2 71646079 71646289 + 13.1 0.000 intron (NM_001130985, intron 41 of 54) intron (NM_001130985, intron 41 of 54) 179485 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr15-745 chr15 43517397 43517607 + 13.1 0.000 promoter-TSS (NM_002373) promoter-TSS (NM_002373) -106 NM_002373 4130 Hs.194301 NM_002373 ENSG00000166963 MAP1A MAP1L|MTAP1A microtubule associated protein 1A protein-coding chr2-1425 chr2 190637387 190637597 + 13.1 0.000 Intergenic Intergenic -11403 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr16-1149 chr16 2744243 2744453 + 13.1 0.000 intron (NR_027275, intron 2 of 5) L1ME4b|LINE|L1 449 NR_027274 100128788 Hs.311208 NR_027274 ENSG00000205913 SRRM2-AS1 - SRRM2 antisense RNA 1 ncRNA chr3-2593 chr3 140972994 140973204 + 13.1 0.000 intron (NM_001104647, intron 5 of 6) intron (NM_001104647, intron 5 of 6) 31263 NM_018155 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr4-1315 chr4 139050454 139050664 + 13.1 0.000 Intergenic L4_B_Mam|LINE|RTE-X 33665 NM_001276459 1998 Hs.634040 NM_006874 ENSG00000109381 ELF2 EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2 E74 like ETS transcription factor 2 protein-coding chr16-1781 chr16 1324491 1324701 + 13.1 0.000 intron (NM_194261, intron 6 of 6) intron (NM_194261, intron 6 of 6) -9049 NM_001199098 8938 Hs.458427 NM_003933 ENSG00000007516 BAIAP3 BAP3 BAI1 associated protein 3 protein-coding chr14-1359 chr14 103292858 103293068 + 13.1 0.000 Intergenic Intergenic -24321 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr10-955 chr10 43105448 43105658 + 13.1 0.000 intron (NM_020630, intron 4 of 18) CpG 821 NM_001355216 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr16-1151 chr16 9008902 9009112 + 13.1 0.000 Intergenic Intergenic -45101 NM_003470 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chr15-953 chr15 39598899 39599109 + 13.1 0.000 3' UTR (NM_003246, exon 22 of 22) 3' UTR (NM_003246, exon 22 of 22) 17925 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr2-4639 chr2 177021049 177021259 + 13.1 0.000 Intergenic Intergenic 191257 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr8-2631 chr8 66713261 66713471 + 13.1 0.000 intron (NM_001033578, intron 1 of 16) intron (NM_001033578, intron 1 of 16) 585 NM_001033578 23678 Hs.613417 NM_013257 ENSG00000104205 SGK3 CISK|SGK2|SGKL serum/glucocorticoid regulated kinase family member 3 protein-coding chr8-1130 chr8 123384487 123384697 + 13.1 0.000 intron (NM_014109, intron 1 of 27) intron (NM_014109, intron 1 of 27) 11855 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr10-2328 chr10 62992415 62992625 + 13.1 0.000 Intergenic Intergenic -140727 NM_001282405 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr1-5272 chr1 205588664 205588874 + 13.1 0.000 intron (NM_181644, intron 6 of 9) intron (NM_181644, intron 6 of 9) -19464 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr2-3167 chr2 200600409 200600619 + 13.1 0.000 intron (NM_001159, intron 5 of 34) intron (NM_001159, intron 5 of 34) 14500 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr2-1363 chr2 3314798 3315008 + 13.1 0.000 intron (NM_001330530, intron 3 of 9) intron (NM_001330530, intron 3 of 9) 62915 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr10-2247 chr10 100086892 100087102 + 13.1 0.000 Intergenic AluJo|SINE|Alu -5128 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chr19-1378 chr19 3655840 3656050 + 13.1 0.000 intron (NM_001195733, intron 6 of 16) intron (NM_001195733, intron 6 of 16) -29130 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr15-955 chr15 40876337 40876547 + 13.1 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -2208 NM_133639 171177 Hs.447901 NM_133639 ENSG00000104140 RHOV ARHV|CHP|WRCH2 ras homolog family member V protein-coding chr10-3687 chr10 103958372 103958582 + 13.1 0.000 Intergenic L1ME3A|LINE|L1 -8663 NM_001304743 9748 Hs.591922 NM_014720 ENSG00000065613 SLK LOSK|STK2|bA16H23.1|se20-9 STE20 like kinase protein-coding chr1-3715 chr1 213138924 213139134 + 13.1 0.000 intron (NM_001136138, intron 5 of 13) L1PA15|LINE|L1 87788 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr16-908 chr16 66153128 66153338 + 13.1 0.000 Intergenic L4_B_Mam|LINE|RTE-X -213458 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr2-4125 chr2 158931648 158931858 + 13.1 0.000 Intergenic Intergenic -36881 NM_001350064 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr1-6167 chr1 185850523 185850733 + 13.1 0.000 intron (NM_031935, intron 2 of 106) intron (NM_031935, intron 2 of 106) 116237 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr4-1968 chr4 141124399 141124609 + 13.1 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 8965 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr9-1787 chr9 137230426 137230636 + 13.1 0.000 promoter-TSS (NM_080877) promoter-TSS (NM_080877) -226 NM_001177316 142680 Hs.432442 NM_080877 ENSG00000198569 SLC34A3 HHRH|NPTIIc solute carrier family 34 member 3 protein-coding chr12-3245 chr12 60494392 60494602 + 13.1 0.000 Intergenic LTR41B|LTR|ERVL 805127 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr9-1808 chr9 78620836 78621046 + 13.1 0.000 Intergenic Intergenic 323816 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr22-840 chr22 42920190 42920400 + 13.1 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 26746 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr1-4887 chr1 34786482 34786692 + 13.1 0.000 TTS (NM_024009) TTS (NM_024009) 4319 NM_001005752 2707 Hs.522561 NM_024009 ENSG00000188910 GJB3 CX31|DFNA2|DFNA2B|EKV|EKVP1 gap junction protein beta 3 protein-coding chr19-1731 chr19 57599776 57599986 + 13.1 0.000 promoter-TSS (NM_001321981) promoter-TSS (NM_001321981) -4 NR_135923 348327 Hs.97111 NM_020880 ENSG00000183647 ZNF530 - zinc finger protein 530 protein-coding chr9-2079 chr9 72349377 72349587 + 13.1 0.000 Intergenic Intergenic 15074 NM_001278245 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr4-2377 chr4 13985001 13985211 + 13.1 0.000 Intergenic Tigger11a|DNA|TcMar-Tigger -126862 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr1-9041 chr1 12318669 12318879 + 13.1 0.000 intron (NM_015378, intron 31 of 69) intron (NM_015378, intron 31 of 69) 88744 NM_015378 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr12-2515 chr12 91074194 91074404 + 13.1 0.000 Intergenic Intergenic -15945 NM_007035 11081 Hs.125750 NM_007035 ENSG00000139330 KERA CNA2|KTN|SLRR2B keratocan protein-coding chr21-231 chr21 33230608 33230818 + 13.1 0.000 intron (NM_207584, intron 1 of 8) CpG 775 NM_000874 3455 Hs.708195 NM_000874 ENSG00000159110 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB|IMD45 interferon alpha and beta receptor subunit 2 protein-coding chr6-1808 chr6 134937044 134937254 + 13.1 0.000 intron (NM_001193480, intron 3 of 5) intron (NM_001193480, intron 3 of 5) 12952 NM_170771 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding chr20-972 chr20 44409225 44409435 + 13.1 0.000 intron (NM_001287183, intron 4 of 10) intron (NM_001287183, intron 4 of 10) 1210 NR_037419 100500813 NR_037419 ENSG00000266151 MIR3646 - microRNA 3646 ncRNA chr19-1376 chr19 2611123 2611333 + 13.1 0.000 intron (NM_052847, intron 2 of 4) CpG -19487 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr13-693 chr13 33126121 33126331 + 13.1 0.000 exon (NM_001243466, exon 7 of 8) exon (NM_001243466, exon 7 of 8) 59865 NM_001243466 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr14-2023 chr14 59663783 59663993 + 13.1 0.000 intron (NM_021136, intron 3 of 8) L1PA7|LINE|L1 -16868 NR_049851 100847088 NR_049851 ENSG00000263629 MIR5586 - microRNA 5586 ncRNA chr6-2466 chr6 36609408 36609618 + 13.1 0.000 Intergenic MIRb|SINE|MIR 12999 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr17-2300 chr17 41500208 41500418 + 13.1 0.000 TTS (NM_002274) TTS (NM_002274) 5299 NM_153490 3860 Hs.654550 NM_002274 ENSG00000171401 KRT13 CK13|K13|WSN2 keratin 13 protein-coding chr7-1611 chr7 2713400 2713610 + 13.1 0.000 3' UTR (NM_001284355, exon 6 of 6) 3' UTR (NM_001284355, exon 6 of 6) 25303 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr18-865 chr18 35089025 35089235 + 13.1 0.000 intron (NM_001143827, intron 3 of 7) L2a|LINE|L2 47717 NR_046177 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr1-1548 chr1 240091768 240091978 + 13.1 0.000 promoter-TSS (NM_001348094) promoter-TSS (NM_001348094) -10 NM_020066 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr14-559 chr14 20455170 20455380 + 13.1 0.000 promoter-TSS (NM_080648) promoter-TSS (NM_080648) 49 NM_080649 328 Hs.73722 NM_001641 ENSG00000100823 APEX1 APE|APE1|APEN|APEX|APX|HAP1|REF1 apurinic/apyrimidinic endodeoxyribonuclease 1 protein-coding chr19-1042 chr19 18507665 18507875 + 13.1 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 14300 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr1-2845 chr1 109516868 109517078 + 13.1 0.000 Intergenic Intergenic -7246 NM_020703 57463 Hs.12264 NM_020703 ENSG00000181754 AMIGO1 ALI2|AMIGO|AMIGO-1 adhesion molecule with Ig like domain 1 protein-coding chr2-2352 chr2 205682335 205682545 + 13.1 0.000 promoter-TSS (NM_201267) promoter-TSS (NM_201267) -60 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr2-2736 chr2 148130539 148130749 + 13.1 0.000 intron (NM_018328, intron 2 of 14) Helitron3Na_Mam|RC|Helitron -109040 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr7-2240 chr7 139394105 139394315 + 13.1 0.000 intron (NM_016019, intron 2 of 9) intron (NM_016019, intron 2 of 9) 33316 NR_033999 100129148 Hs.744449 NR_033999 LOC100129148 - uncharacterized LOC100129148 ncRNA chr21-782 chr21 45151574 45151784 + 13.1 0.000 promoter-TSS (NM_001346687) promoter-TSS (NM_001346687) -851 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr8-1627 chr8 65643849 65644059 + 13.1 0.000 promoter-TSS (NM_014637) promoter-TSS (NM_014637) -699 NM_001145839 9650 Hs.584788 NM_014637 ENSG00000066855 MTFR1 CHPPR|FAM54A2 mitochondrial fission regulator 1 protein-coding chr3-2584 chr3 128451688 128451898 + 13.1 0.000 Intergenic L2a|LINE|L2 -11801 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr18-953 chr18 23522619 23522829 + 13.1 0.000 intron (NM_001318707, intron 7 of 16) intron (NM_001318707, intron 7 of 16) 19213 NM_013326 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr9-1626 chr9 133506763 133506973 + 13.1 0.000 Intergenic L2c|LINE|L2 18091 NM_001080483 389827 NM_001080483 ENSG00000187616 MYMK MYOMAKER|TMEM226|TMEM8C myomaker, myoblast fusion factor protein-coding chr1-1662 chr1 12619896 12620106 + 13.1 0.000 Intergenic Intergenic -1791 NM_004753 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding chr2-6754 chr2 40281487 40281697 + 13.1 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 148712 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr10-1208 chr10 5873616 5873826 + 13.1 0.000 intron (NM_019046, intron 7 of 7) intron (NM_019046, intron 7 of 7) -15851 NM_001258452 84893 Hs.498543 NM_032807 ENSG00000134452 FBH1 FBXO18|Fbx18|hFBH1 F-box DNA helicase 1 protein-coding chr1-3976 chr1 154813298 154813508 + 13.1 0.000 intron (NM_170782, intron 2 of 7) intron (NM_170782, intron 2 of 7) 46473 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr8-1078 chr8 134712895 134713105 + 13.1 0.000 promoter-TSS (NM_001289394) promoter-TSS (NM_001289394) 31 NM_020863 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding chr11-4000 chr11 3670081 3670291 + 13.1 0.000 intron (NM_020402, intron 1 of 4) intron (NM_020402, intron 1 of 4) 1198 NM_001303035 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr6-1617 chr6 71080927 71081137 + 13.1 0.000 Intergenic Intergenic -123972 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr6-1275 chr6 80438879 80439089 + 13.1 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 332313 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr10-3943 chr10 98403581 98403791 + 13.1 0.000 intron (NM_032709, intron 4 of 15) L2b|LINE|L2 -8379 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr20-944 chr20 31496795 31497005 + 13.1 0.000 Intergenic Intergenic 11122 NR_024358 140875 Hs.283478 NR_024358 ENSG00000233354 LINC00028 C20orf93|NCRNA00028|dJ1093G12.6 long intergenic non-protein coding RNA 28 ncRNA chr4-2071 chr4 19675450 19675660 + 13.1 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -576350 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr3-4405 chr3 196962713 196962923 + 13.1 0.000 intron (NM_025163, intron 1 of 2) LTR5B|LTR|ERVK 6015 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding chr7-3103 chr7 24572605 24572815 + 13.1 0.000 promoter-TSS (NM_001303037) promoter-TSS (NM_001303037) -742 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr1-7296 chr1 242110430 242110640 + 13.1 0.000 intron (NM_001320272, intron 8 of 10) AluSq2|SINE|Alu -111437 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr12-2828 chr12 122860243 122860453 + 13.1 0.000 intron (NM_003959, intron 26 of 31) intron (NM_003959, intron 26 of 31) 24891 NM_001303097 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr3-3408 chr3 81198838 81199048 + 13.1 0.000 Intergenic Intergenic 205075 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr3-3353 chr3 23728779 23728989 + 13.1 0.000 Intergenic Intergenic -77071 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr9-2077 chr9 71353872 71354082 + 13.1 0.000 intron (NM_001366143, intron 1 of 25) MIR3|SINE|MIR 92994 NM_001366143 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr14-1171 chr14 54209718 54209928 + 13.1 0.000 Intergenic MER121|DNA|hAT? -187045 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr12-1568 chr12 119693194 119693404 + 13.1 0.000 intron (NM_007174, intron 45 of 46) intron (NM_007174, intron 45 of 46) 20425 NR_031589 100302274 NR_031589 ENSG00000283768 MIR1178 MIRN1178|hsa-mir-1178 microRNA 1178 ncRNA chr17-2838 chr17 18033599 18033809 + 13.1 0.000 intron (NM_145691, intron 1 of 7) intron (NM_145691, intron 1 of 7) 5464 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr10-1249 chr10 97422939 97423149 + 13.1 0.000 intron (NR_157582, intron 1 of 1) MIRb|SINE|MIR 3013 NR_157582 644215 NR_157582 LOC644215 - uncharacterized LOC644215 ncRNA chr15-883 chr15 74800131 74800341 + 13.1 0.000 intron (NM_004383, intron 5 of 12) intron (NM_004383, intron 5 of 12) -11479 NR_039738 100616183 NR_039738 ENSG00000264386 MIR4513 - microRNA 4513 ncRNA chr2-2447 chr2 68316239 68316449 + 13.1 0.000 intron (NM_015463, intron 2 of 2) intron (NM_015463, intron 2 of 2) 3707 NM_015463 25927 Hs.212885 NM_015463 ENSG00000119865 CNRIP1 C2orf32|CRIP1 cannabinoid receptor interacting protein 1 protein-coding chr9-1725 chr9 122464886 122465096 + 13.1 0.000 Intergenic MER65-int|LTR|ERV1 12935 NM_001004451 347168 Hs.632692 NM_001004451 ENSG00000136834 OR1J1 OR9-18|hg32 olfactory receptor family 1 subfamily J member 1 protein-coding chr1-5207 chr1 181102923 181103133 + 13.1 0.000 Intergenic Intergenic 14328 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr21-186 chr21 39313676 39313886 + 13.1 0.000 promoter-TSS (NR_111942) promoter-TSS (NR_111942) 5 NM_001007246 54014 Hs.627139 NM_018963 ENSG00000185658 BRWD1 C21orf107|DCAF19|N143|WDR9|WRD9 bromodomain and WD repeat domain containing 1 protein-coding chr17-4163 chr17 83178362 83178572 + 13.1 0.000 Intergenic Intergenic -48430 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr5-1733 chr5 154368051 154368261 + 13.1 0.000 intron (NM_198321, intron 4 of 11) MER5A|DNA|hAT-Charlie 21050 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr9-4024 chr9 73683970 73684180 + 13.1 0.000 Intergenic L1M1|LINE|L1 532210 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr6-1609 chr6 46045312 46045522 + 13.1 0.000 intron (NM_001370649, intron 1 of 5) intron (NM_001370649, intron 1 of 5) -29528 NM_001256023 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr12-1565 chr12 114848823 114849033 + 13.1 0.000 Intergenic Intergenic -164753 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr10-1529 chr10 75959270 75959480 + 13.1 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 176614 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr2-1291 chr2 177265252 177265462 + 13.1 0.000 promoter-TSS (NM_006164) promoter-TSS (NM_006164) -226 NM_001313903 4780 Hs.744006 NM_006164 ENSG00000116044 NFE2L2 HEBP1|IMDDHH|NRF2 nuclear factor, erythroid 2 like 2 protein-coding chr19-2264 chr19 56245575 56245785 + 13.1 0.000 intron (NM_001322061, intron 2 of 6) intron (NM_001322061, intron 2 of 6) -15281 NM_001322062 79149 Hs.177688 NM_024303 ENSG00000131848 ZSCAN5A ZNF495|ZSCAN5 zinc finger and SCAN domain containing 5A protein-coding chr3-2218 chr3 30444306 30444516 + 13.1 0.000 Intergenic Intergenic -74457 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr11-1700 chr11 66561968 66562178 + 13.1 0.000 exon (NM_001104, exon 18 of 21) exon (NM_001104, exon 18 of 21) 6533 NM_003793 8722 Hs.11590 NM_003793 ENSG00000174080 CTSF CATSF|CLN13 cathepsin F protein-coding chr5-1941 chr5 8843008 8843218 + 13.1 0.000 intron (NR_109932, intron 1 of 2) intron (NR_109932, intron 1 of 2) 3381 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr13-990 chr13 57632085 57632295 + 13.1 0.000 5' UTR (NM_001040429, exon 1 of 4) 5' UTR (NM_001040429, exon 1 of 4) 446 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr11-2031 chr11 65213815 65214025 + 13.1 0.000 promoter-TSS (NR_033396) promoter-TSS (NR_033396) 80 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr4-2118 chr4 60542228 60542438 + 13.1 0.000 Intergenic Intergenic -380286 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr9-1511 chr9 72315854 72316064 + 13.1 0.000 TTS (NR_110953) TTS (NR_110953) 10523 NR_110952 100507540 Hs.54957 NR_110952 ENSG00000225434 LINC01504 - long intergenic non-protein coding RNA 1504 ncRNA chr2-3275 chr2 25738802 25739012 + 13.1 0.000 3' UTR (NM_018263, exon 12 of 12) 3' UTR (NM_018263, exon 12 of 12) 55784 NM_001369347 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr2-4888 chr2 124823576 124823786 + 13.1 0.000 intron (NM_130773, intron 19 of 23) MIRb|SINE|MIR 798394 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr19-2021 chr19 55160739 55160949 + 13.1 0.000 intron (NM_001256716, intron 8 of 11) CpG -3112 NM_000363 7137 Hs.709179 NM_000363 ENSG00000129991 TNNI3 CMD1FF|CMD2A|CMH7|RCM1|TNNC1|cTnI troponin I3, cardiac type protein-coding chr10-3134 chr10 58514040 58514250 + 13.1 0.000 intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 1273 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr11-1499 chr11 19240948 19241158 + 13.1 0.000 promoter-TSS (NM_024680) promoter-TSS (NM_024680) -108 NM_024680 79733 Hs.523526 NM_024680 ENSG00000129173 E2F8 E2F-8 E2F transcription factor 8 protein-coding chr16-1167 chr16 81213097 81213307 + 13.1 0.000 intron (NM_001076780, intron 3 of 17) MamGypLTR1a|LTR|Gypsy 7192 NM_001076780 114780 Hs.413525 NM_052892 ENSG00000166473 PKD1L2 PC1L2 polycystin 1 like 2 (gene/pseudogene) protein-coding chr9-1666 chr9 34913679 34913889 + 13.1 0.000 Intergenic HAL1|LINE|L1 -18020 NM_001309426 100129969 Hs.571602 NM_001309426 ENSG00000187791 FAM205C FAM205CP family with sequence similarity 205 member C protein-coding chr8-3413 chr8 69729958 69730168 + 13.1 0.000 intron (NM_001146009, intron 3 of 7) MIRb|SINE|MIR 103106 NM_001146009 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr16-3007 chr16 29791567 29791777 + 13.1 0.000 intron (NM_001256270, intron 1 of 13) MIR|SINE|MIR 704 NM_001256270 3835 Hs.612151 NM_007317 ENSG00000079616 KIF22 A-328A3.2|KID|KNSL4|OBP|OBP-1|OBP-2|SEMDJL2 kinesin family member 22 protein-coding chr17-1982 chr17 42667856 42668066 + 13.1 0.000 TTS (NM_024927) TTS (NM_024927) 8050 NR_073574 79990 Hs.632251 NM_024927 ENSG00000068137 PLEKHH3 - pleckstrin homology, MyTH4 and FERM domain containing H3 protein-coding chr4-1362 chr4 19187193 19187403 + 13.1 0.000 Intergenic Intergenic -1064607 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr3-1991 chr3 160725390 160725600 + 13.1 0.000 Intergenic L1PA16|LINE|L1 -30736 NM_139245 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr2-2105 chr2 9757707 9757917 + 13.1 0.000 Intergenic Intergenic -85630 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chrX-265 chrX 65644924 65645134 + 13.1 0.000 Intergenic Intergenic -22625 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr3-2703 chr3 63580406 63580616 + 13.1 0.000 intron (NM_001130003, intron 4 of 5) intron (NM_001130003, intron 4 of 5) -30460 NR_046677 100874016 Hs.441275 NR_046677 ENSG00000241359 SYNPR-AS1 - SYNPR antisense RNA 1 ncRNA chr9-2270 chr9 113222159 113222369 + 13.1 0.000 promoter-TSS (NM_015258) promoter-TSS (NM_015258) 720 NM_001859 1317 Hs.532315 NM_001859 ENSG00000136868 SLC31A1 COPT1|CTR1 solute carrier family 31 member 1 protein-coding chr5-3240 chr5 95267610 95267820 + 13.1 0.000 intron (NM_024717, intron 1 of 22) intron (NM_024717, intron 1 of 22) 16860 NM_024717 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr15-1457 chr15 89760674 89760884 + 13.1 0.000 Intergenic Intergenic -9470 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr8-1181 chr8 38612765 38612975 + 13.1 0.000 Intergenic Intergenic -11613 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr19-2599 chr19 1969424 1969634 + 13.1 0.000 5' UTR (NM_001319, exon 2 of 12) 5' UTR (NM_001319, exon 2 of 12) -14980 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr11-1689 chr11 64792161 64792371 + 13.1 0.000 exon (NM_004579, exon 26 of 32) exon (NM_004579, exon 26 of 32) 10948 NM_004579 5871 Hs.534341 NM_004579 ENSG00000168067 MAP4K2 BL44|GCK|RAB8IP mitogen-activated protein kinase kinase kinase kinase 2 protein-coding chr7-2004 chr7 27740540 27740750 + 13.1 0.000 intron (NM_001362794, intron 1 of 16) CpG 550 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr3-3229 chr3 12716951 12717161 + 13.1 0.000 Intergenic Intergenic 42203 NM_001284407 55287 Hs.475502 NM_018306 ENSG00000088726 TMEM40 - transmembrane protein 40 protein-coding chr5-736 chr5 157387586 157387796 + 13.1 0.000 intron (NM_001037333, intron 28 of 30) intron (NM_001037333, intron 28 of 30) -42014 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr16-2300 chr16 12231819 12232029 + 13.1 0.000 intron (NM_032167, intron 14 of 20) L1ME4c|LINE|L1 255190 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr4-1237 chr4 1798162 1798372 + 13.1 0.000 intron (NR_148971, intron 2 of 18) intron (NR_148971, intron 2 of 18) 4955 NM_001163213 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr1-5592 chr1 6539115 6539325 + 13.1 0.000 intron (NM_024654, intron 6 of 11) L1MB4|LINE|L1 15293 NM_024654 79707 Hs.59425 NM_024654 ENSG00000162408 NOL9 Grc3|NET6 nucleolar protein 9 protein-coding chr1-4657 chr1 201753533 201753743 + 13.1 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 13738 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr13-1607 chr13 45719033 45719243 + 13.1 0.000 Intergenic Intergenic 16669 NM_001286342 220082 Hs.186363 NM_152719 ENSG00000174015 SPERT CBY2|NURIT spermatid associated protein-coding chr12-2226 chr12 54338290 54338500 + 13.1 0.000 intron (NM_001271734, intron 1 of 7) intron (NM_001271734, intron 1 of 7) 1179 NR_029894 442892 NR_029894 ENSG00000199122 MIR148B MIRN148B|mir-148b microRNA 148b ncRNA chr1-4300 chr1 23122412 23122622 + 13.1 0.000 intron (NM_033631, intron 1 of 4) intron (NM_033631, intron 1 of 4) 46339 NM_033631 7798 Hs.257900 NM_033631 ENSG00000169641 LUZP1 LUZP leucine zipper protein 1 protein-coding chr5-1881 chr5 149606194 149606404 + 13.1 0.000 intron (NM_001001669, intron 3 of 12) intron (NM_001001669, intron 3 of 12) 24801 NM_001001669 389337 Hs.256206 NM_001001669 ENSG00000183111 ARHGEF37 - Rho guanine nucleotide exchange factor 37 protein-coding chrX-666 chrX 135343995 135344205 + 13.1 0.000 promoter-TSS (NM_007131) promoter-TSS (NM_007131) 9 NR_110381 7626 Hs.371717 NM_007131 ENSG00000186376 ZNF75D D8C6|ZKSCAN24|ZNF75|ZNF82|ZSCAN28 zinc finger protein 75D protein-coding chr6-886 chr6 90285658 90285868 + 13.1 0.000 intron (NM_021813, intron 1 of 8) intron (NM_021813, intron 1 of 8) 11080 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr6-1123 chr6 143336515 143336725 + 13.1 0.000 intron (NM_001366361, intron 6 of 6) MLT1B|LTR|ERVL-MaLR 106057 NM_001286259 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase tRNA specific 2 protein-coding chr6-2225 chr6 44116801 44117011 + 13.1 0.000 intron (NM_001318767, intron 1 of 2) intron (NM_001318767, intron 1 of 2) 9361 NM_001318770 64928 Hs.311190 NM_032111 ENSG00000180992 MRPL14 L14mt|L32mt|MRP-L14|MRP-L32|MRPL32|RMPL32|RPML32 mitochondrial ribosomal protein L14 protein-coding chr1-2767 chr1 110088157 110088367 + 13.1 0.000 intron (NR_126382, intron 1 of 3) intron (NR_126382, intron 1 of 3) 5574 NR_126382 104355139 Hs.628193 NR_126382 ENSG00000258673 LINC01397 - long intergenic non-protein coding RNA 1397 ncRNA chr15-1317 chr15 73737505 73737715 + 13.1 0.000 3' UTR (NM_001303254, exon 3 of 3) 3' UTR (NM_001303254, exon 3 of 3) 13865 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr11-3164 chr11 61761495 61761705 + 13.1 0.000 intron (NM_013279, intron 1 of 25) intron (NM_013279, intron 1 of 25) -3936 NR_026882 26070 Hs.564254 NR_026882 ENSG00000124915 MYRF-AS1 DKFZP434K028 MYRF antisense RNA 1 ncRNA chr18-787 chr18 45662575 45662785 + 13.1 0.000 intron (NM_007163, intron 10 of 19) MIRc|SINE|MIR 47204 NM_007163 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr10-6026 chr10 125973403 125973613 + 13.1 0.000 promoter-TSS (NR_102707) promoter-TSS (NR_102707) -235 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr6-1305 chr6 1917695 1917905 + 13.1 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 258191 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr1-2652 chr1 171090688 171090898 + 13.1 0.000 promoter-TSS (NM_001319173) promoter-TSS (NM_001319173) -112 NM_001319173 2328 Hs.445350 NM_006894 ENSG00000007933 FMO3 FMOII|TMAU|dJ127D3.1 flavin containing dimethylaniline monoxygenase 3 protein-coding chr1-7580 chr1 220631790 220632000 + 13.1 0.000 intron (NM_018650, intron 10 of 17) intron (NM_018650, intron 10 of 17) -58468 NM_024709 79762 Hs.519839 NM_024709 ENSG00000162817 C1orf115 - chromosome 1 open reading frame 115 protein-coding chr17-6207 chr17 5826421 5826631 + 13.1 0.000 intron (NR_040000, intron 1 of 3) intron (NR_040000, intron 1 of 3) 54292 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr1-2131 chr1 230169875 230170085 + 13.1 0.000 intron (NM_004481, intron 1 of 15) MER5B|DNA|hAT-Charlie 102742 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr3-4214 chr3 134033982 134034192 + 13.1 0.000 Intergenic Intergenic -4162 NM_005630 6578 Hs.518270 NM_005630 ENSG00000174640 SLCO2A1 MATR1|OATP2A1|PGT|PHOAR2|SLC21A2 solute carrier organic anion transporter family member 2A1 protein-coding chrX-865 chrX 148500173 148500383 + 13.1 0.000 promoter-TSS (NM_001169122) promoter-TSS (NM_001169122) -339 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr11-5621 chr11 118370984 118371194 + 13.1 0.000 intron (NM_001204077, intron 4 of 19) intron (NM_001204077, intron 4 of 19) 11489 NM_004788 9354 Hs.75275 NM_004788 ENSG00000110344 UBE4A E4|UBOX2|UFD2 ubiquitination factor E4A protein-coding chr17-3883 chr17 49893564 49893774 + 13.1 0.000 Intergenic Intergenic -45652 NM_001077506 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr21-551 chr21 42846429 42846639 + 13.1 0.000 intron (NM_033661, intron 11 of 11) intron (NM_033661, intron 11 of 11) 32741 NM_001260477 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr20-1316 chr20 62648755 62648965 + 13.1 0.000 intron (NM_016354, intron 1 of 11) intron (NM_016354, intron 1 of 11) 6357 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chr20-2329 chr20 9967094 9967304 + 13.0 0.000 Intergenic MIRb|SINE|MIR -19134 NR_109861 101929371 Hs.619265 NR_109861 PARAL1 - PPARG activating RBM14 associated lncRNA 1 ncRNA chr10-3445 chr10 47195937 47196147 + 13.0 0.000 Intergenic Intergenic -104155 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr4-3835 chr4 123175819 123176029 + 13.0 0.000 intron (NM_001345856, intron 14 of 15) MER90a|LTR|ERV1 -220871 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr12-1977 chr12 122990075 122990285 + 13.0 0.000 intron (NM_020845, intron 16 of 24) intron (NM_020845, intron 16 of 24) 10120 NM_018694 51329 Hs.103561 NM_016638 ENSG00000182196 ARL6IP4 SFRS20|SR-25|SRp25|SRrp37 ADP ribosylation factor like GTPase 6 interacting protein 4 protein-coding chr2-5293 chr2 68805851 68806061 + 13.0 0.000 intron (NM_014882, intron 3 of 9) intron (NM_014882, intron 3 of 9) 31046 NM_001166276 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding chr1-6824 chr1 97048943 97049153 + 13.0 0.000 Intergenic Intergenic -46875 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr13-544 chr13 100100732 100100942 + 13.0 0.000 intron (NM_001352608, intron 1 of 21) AluSp|SINE|Alu 11744 NM_001352606 5095 Hs.80741 NM_000282 ENSG00000175198 PCCA - propionyl-CoA carboxylase subunit alpha protein-coding chr9-3469 chr9 6102598 6102808 + 13.0 0.000 Intergenic HERVL-int|LTR|ERVL -87079 NM_012416 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr19-2207 chr19 36035638 36035848 + 13.0 0.000 intron (NM_001331102, intron 3 of 3) intron (NM_001331102, intron 3 of 3) -2870 NM_015526 25999 Hs.466539 NM_015526 ENSG00000105270 CLIP3 CLIPR-59|CLIPR59|RSNL1 CAP-Gly domain containing linker protein 3 protein-coding chr2-4164 chr2 180571628 180571838 + 13.0 0.000 Intergenic L1MB7|LINE|L1 -120371 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr5-1745 chr5 176800382 176800592 + 13.0 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -10072 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 netrin receptor A protein-coding chr9-1510 chr9 38363060 38363270 + 13.0 0.000 Intergenic Intergenic -29537 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr22-1125 chr22 40258736 40258946 + 13.0 0.000 intron (NM_015088, intron 3 of 20) intron (NM_015088, intron 3 of 20) 80916 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr11-2287 chr11 10584252 10584462 + 13.0 0.000 intron (NM_001100163, intron 18 of 20) intron (NM_001100163, intron 18 of 20) -15692 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr1-3592 chr1 16045334 16045544 + 13.0 0.000 intron (NM_000085, intron 2 of 19) intron (NM_000085, intron 2 of 19) 1703 NM_000085 1188 Hs.352243 NM_000085 ENSG00000184908 CLCNKB CLCKB|ClC-K2|ClC-Kb chloride voltage-gated channel Kb protein-coding chr20-1783 chr20 57266340 57266550 + 13.0 0.000 5' UTR (NM_001719, exon 1 of 7) 5' UTR (NM_001719, exon 1 of 7) 196 NM_001719 655 Hs.473163 NM_001719 ENSG00000101144 BMP7 OP-1 bone morphogenetic protein 7 protein-coding chr9-2055 chr9 18564386 18564596 + 13.0 0.000 intron (NM_052866, intron 3 of 12) intron (NM_052866, intron 3 of 12) -8815 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr14-817 chr14 100649016 100649226 + 13.0 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -8147 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chr6-5119 chr6 120790091 120790301 + 13.0 0.000 Intergenic Intergenic 544284 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr2-10783 chr2 43705966 43706176 + 13.0 0.000 intron (NM_172069, intron 9 of 29) L2c|LINE|L2 -29642 NM_001101330 728819 NM_001101330 ENSG00000223658 C1GALT1C1L - C1GALT1 specific chaperone 1 like protein-coding chr15-1331 chr15 91140905 91141115 + 13.0 0.000 intron (NM_001323040, intron 2 of 12) intron (NM_001323040, intron 2 of 12) 39214 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr8-824 chr8 29315437 29315647 + 13.0 0.000 Intergenic Intergenic 33263 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr20-671 chr20 23832192 23832402 + 13.0 0.000 Intergenic Intergenic -5568 NM_001322 1470 Hs.669305 NM_001322 ENSG00000170369 CST2 - cystatin SA protein-coding chr1-11074 chr1 227490034 227490244 + 13.0 0.000 Intergenic Intergenic -73417 NM_178549 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr1-4338 chr1 64471715 64471925 + 13.0 0.000 intron (NM_020925, intron 1 of 26) intron (NM_020925, intron 1 of 26) 1691 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr17-3327 chr17 68555495 68555705 + 13.0 0.000 exon (NM_001243746, exon 3 of 12) exon (NM_001243746, exon 3 of 12) 2827 NR_027751 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding chr12-2104 chr12 52086353 52086563 + 13.0 0.000 intron (NR_120439, intron 1 of 1) intron (NR_120439, intron 1 of 1) 1712 NR_120438 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr7-2471 chr7 1748679 1748889 + 13.0 0.000 TTS (NM_001128636) TTS (NM_001128636) -6474 NR_120508 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr1-1969 chr1 165630883 165631093 + 13.0 0.000 promoter-TSS (NM_004528) promoter-TSS (NM_004528) -246 NM_004528 4259 Hs.191734 NM_004528 ENSG00000143198 MGST3 GST-III microsomal glutathione S-transferase 3 protein-coding chr1-5531 chr1 205459110 205459320 + 13.0 0.000 intron (NR_148934, intron 2 of 2) intron (NR_148934, intron 2 of 2) -3129 NR_103783 101669762 Hs.666219 NR_103783 BLACAT1 LINC00912|linc-UBC1|onco-lncRNA-30 bladder cancer associated transcript 1 ncRNA chr1-2969 chr1 151314169 151314379 + 13.0 0.000 intron (NM_002651, intron 3 of 12) intron (NM_002651, intron 3 of 12) 13142 NM_001198773 5298 Hs.632465 NM_002651 ENSG00000143393 PI4KB NPIK|PI4K-BETA|PI4K92|PI4KBETA|PI4KIIIBETA|PIK4CB phosphatidylinositol 4-kinase beta protein-coding chr9-2081 chr9 75238418 75238628 + 13.0 0.000 Intergenic HERVL18-int|LTR|ERVL 150009 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr10-1859 chr10 77714057 77714267 + 13.0 0.000 Intergenic Intergenic -76354 NM_001271522 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr7-1165 chr7 1839330 1839540 + 13.0 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) 4818 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr10-2033 chr10 77609795 77610005 + 13.0 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 27908 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr2-9812 chr2 137542398 137542608 + 13.0 0.000 intron (NM_001316349, intron 15 of 27) L1MB7|LINE|L1 385429 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr10-3209 chr10 101001297 101001507 + 13.0 0.000 intron (NM_001318100, intron 1 of 4) intron (NM_001318100, intron 1 of 4) -1095 NM_001318101 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr9-3680 chr9 99176512 99176722 + 13.0 0.000 Intergenic Intergenic 45325 NR_024532 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2 alpha-1,3/1,6-mannosyltransferase protein-coding chr10-777 chr10 21526179 21526389 + 13.0 0.000 promoter-TSS (NM_207371) promoter-TSS (NM_207371) -602 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr17-4005 chr17 73713759 73713969 + 13.0 0.000 Intergenic Intergenic -23990 NM_001278587 100134391 Hs.694655 NM_001278587 LOC100134391 - uncharacterized LOC100134391 protein-coding chr3-7029 chr3 172279447 172279657 + 13.0 0.000 intron (NM_001135095, intron 6 of 25) intron (NM_001135095, intron 6 of 25) 168904 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr17-5705 chr17 55495386 55495596 + 13.0 0.000 Intergenic Intergenic -73656 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr2-7760 chr2 39306682 39306892 + 13.0 0.000 intron (NM_001270425, intron 14 of 32) intron (NM_001270425, intron 14 of 32) -62804 NR_144521 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr21-410 chr21 43340868 43341078 + 13.0 0.000 Intergenic Intergenic -8934 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr8-3530 chr8 119342678 119342888 + 13.0 0.000 Intergenic Intergenic 17612 NR_106755 102466162 NR_106755 ENSG00000276479 MIR548AZ hsa-mir-548az microRNA 548az ncRNA chr2-9355 chr2 227236158 227236368 + 13.0 0.000 intron (NR_102371, intron 10 of 13) L1PB1|LINE|L1 71698 NM_000091 1285 Hs.570065 NM_000091 ENSG00000169031 COL4A3 ATS2|ATS3 collagen type IV alpha 3 chain protein-coding chr1-2680 chr1 201553127 201553337 + 13.0 0.000 Intergenic Intergenic 33328 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr1-9488 chr1 36951120 36951330 + 13.0 0.000 intron (NM_000831, intron 1 of 15) intron (NM_000831, intron 1 of 15) 83290 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr11-2740 chr11 32888710 32888920 + 13.0 0.000 Intergenic Intergenic -3996 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr9-2637 chr9 26012869 26013079 + 13.0 0.000 Intergenic L2a|LINE|L2 -53701 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr9-1069 chr9 127683605 127683815 + 13.0 0.000 intron (NM_001032221, intron 18 of 18) intron (NM_001032221, intron 18 of 18) 7085 NR_037473 100500872 NR_037473 ENSG00000283874 MIR3911 mir-3911 microRNA 3911 ncRNA chr13-2557 chr13 65871752 65871962 + 13.0 0.000 intron (NR_132362, intron 1 of 2) L2c|LINE|L2 5810 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr1-3055 chr1 12208944 12209154 + 13.0 0.000 3' UTR (NM_001066, exon 10 of 10) 3' UTR (NM_001066, exon 10 of 10) 17336 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr3-4343 chr3 181085044 181085254 + 13.0 0.000 intron (NR_075091, intron 1 of 7) L1MC1|LINE|L1 28469 NR_075092 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr1-10572 chr1 174433574 174433784 + 13.0 0.000 intron (NM_001366446, intron 13 of 25) intron (NM_001366446, intron 13 of 25) -14285 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr15-1298 chr15 42890552 42890762 + 13.0 0.000 intron (NM_173500, intron 1 of 14) intron (NM_173500, intron 1 of 14) 30121 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr12-2601 chr12 121508679 121508889 + 13.0 0.000 intron (NM_001005366, intron 11 of 22) intron (NM_001005366, intron 11 of 22) -64432 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr3-1219 chr3 74072212 74072422 + 13.0 0.000 Intergenic Intergenic 263073 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr11-3145 chr11 46906436 46906646 + 13.0 0.000 intron (NM_002334, intron 1 of 37) intron (NM_002334, intron 1 of 37) 12009 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chr2-7656 chr2 28491313 28491523 + 13.0 0.000 Intergenic Intergenic -4642 NM_153021 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr1-3493 chr1 99082539 99082749 + 13.0 0.000 intron (NR_033940, intron 1 of 2) L2b|LINE|L2 -77783 NM_001010861 163404 Hs.483948 NM_001010861 ENSG00000117598 PLPPR5 LPPR5|PAP2|PAP2D|PRG5 phospholipid phosphatase related 5 protein-coding chr9-1895 chr9 123953187 123953397 + 13.0 0.000 Intergenic Intergenic -23154 NM_001352964 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr17-1212 chr17 82712420 82712630 + 13.0 0.000 Intergenic MER52A|LTR|ERV1 3728 NR_136400 101929552 Hs.375081 NR_136400 ENSG00000263063 LOC101929552 - uncharacterized LOC101929552 ncRNA chr8-1149 chr8 144160158 144160368 + 13.0 0.000 intron (NM_001288814, intron 1 of 41) L1MEc|LINE|L1 11618 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr4-3549 chr4 176957702 176957912 + 13.0 0.000 Intergenic Intergenic 82105 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr3-3985 chr3 54578559 54578769 + 13.0 0.000 intron (NM_018398, intron 8 of 37) intron (NM_018398, intron 8 of 37) 61193 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr1-2842 chr1 98342873 98343083 + 13.0 0.000 Intergenic Intergenic 132267 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr1-6193 chr1 205175967 205176177 + 13.0 0.000 intron (NM_199462, intron 2 of 11) intron (NM_199462, intron 2 of 11) 35630 NM_199462 25778 Hs.6874 NM_015375 ENSG00000133059 DSTYK CAKUT1|DustyPK|HDCMD38P|RIP5|RIPK5|SPG23 dual serine/threonine and tyrosine protein kinase protein-coding chr19-2227 chr19 43594889 43595099 + 13.0 0.000 exon (NM_001007561, exon 2 of 3) exon (NM_001007561, exon 2 of 3) 1141 NM_001007561 126298 Hs.6217 NM_001007561 ENSG00000167378 IRGQ FKSG27|IRGQ1 immunity related GTPase Q protein-coding chr8-1816 chr8 121271008 121271218 + 13.0 0.000 Intergenic Intergenic -368233 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr8-3698 chr8 18438847 18439057 + 13.0 0.000 Intergenic AluSz6|SINE|Alu 47670 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr22-1423 chr22 43628304 43628514 + 13.0 0.000 intron (NM_198856, intron 17 of 29) L2a|LINE|L2 112155 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr21-497 chr21 26964502 26964712 + 13.0 0.000 intron (NM_007038, intron 1 of 7) intron (NM_007038, intron 1 of 7) 2481 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr4-996 chr4 169757747 169757957 + 13.0 0.000 promoter-TSS (NM_017867) promoter-TSS (NM_017867) 92 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr6-3155 chr6 113774396 113774606 + 13.0 0.000 Intergenic Intergenic -82844 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding chr12-2747 chr12 39442270 39442480 + 13.0 0.000 intron (NM_001173464, intron 1 of 37) intron (NM_001173464, intron 1 of 37) 745 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr10-3476 chr10 63388461 63388671 + 13.0 0.000 intron (NM_001322258, intron 1 of 24) L1M2|LINE|L1 -15518 NR_031566 100302150 NR_031566 ENSG00000221063 MIR1296 MIRN1296|hsa-mir-1296|mir-1296 microRNA 1296 ncRNA chr5-1234 chr5 154277151 154277361 + 13.0 0.000 intron (NM_198321, intron 1 of 11) MLT1H|LTR|ERVL-MaLR -69850 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr3-2699 chr3 60742958 60743168 + 13.0 0.000 intron (NR_148921, intron 4 of 4) intron (NR_148921, intron 4 of 4) -125193 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr1-7350 chr1 13730756 13730966 + 13.0 0.000 intron (NM_012231, intron 2 of 9) intron (NM_012231, intron 2 of 9) -18554 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr8-2468 chr8 130762544 130762754 + 13.0 0.000 Intergenic Intergenic 278260 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr2-6261 chr2 45233329 45233539 + 13.0 0.000 intron (NR_033831, intron 1 of 5) HSMAR2|DNA|TcMar-Mariner 21507 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr4-1826 chr4 86935779 86935989 + 13.0 0.000 intron (NM_001166693, intron 1 of 20) CpG 882 NM_001166693 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr16-1567 chr16 85488272 85488482 + 13.0 0.000 Intergenic Intergenic -123032 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr17-2046 chr17 48420747 48420957 + 13.0 0.000 intron (NM_001075099, intron 1 of 12) MER20|DNA|hAT-Charlie 9362 NM_003726 8631 Hs.316931 NM_003726 ENSG00000141293 SKAP1 HEL-S-81p|SCAP1|SKAP55 src kinase associated phosphoprotein 1 protein-coding chr11-3042 chr11 3627396 3627606 + 13.0 0.000 intron (NR_002720, intron 2 of 6) intron (NR_002720, intron 2 of 6) 1041 NR_002720 7221 Hs.131910 NR_002720 ENSG00000182048 TRPC2 - transient receptor potential cation channel subfamily C member 2 (pseudogene) pseudo chr20-1050 chr20 2352006 2352216 + 13.0 0.000 Intergenic AluYc|SINE|Alu -28790 NM_001254734 343641 Hs.452039 NM_198994 ENSG00000166948 TGM6 SCA35|TG6|TGM3L|TGY|dJ734P14.3 transglutaminase 6 protein-coding chr3-5823 chr3 30853982 30854192 + 13.0 0.000 intron (NM_207359, intron 4 of 14) L2b|LINE|L2 40574 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr14-1961 chr14 35243561 35243771 + 13.0 0.000 intron (NM_014672, intron 5 of 7) intron (NM_014672, intron 5 of 7) -34892 NM_001282234 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr6-3796 chr6 25697824 25698034 + 13.0 0.000 intron (NM_006998, intron 10 of 10) MIR|SINE|MIR 28633 NM_170745 221613 Hs.406739 NM_170745 ENSG00000164508 HIST1H2AA H2AA|H2AFR|TH2A|bA317E16.2 histone cluster 1 H2A family member a protein-coding chr6-4358 chr6 20025082 20025292 + 13.0 0.000 Intergenic Intergenic 187282 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr8-1394 chr8 30744398 30744608 + 13.0 0.000 intron (NM_001282189, intron 1 of 7) intron (NM_001282189, intron 1 of 7) 338 NM_001282189 7993 Hs.153678 NM_005671 ENSG00000104691 UBXN8 D8S2298E|REP8|UBXD6 UBX domain protein 8 protein-coding chr1-9785 chr1 56797166 56797376 + 13.0 0.000 intron (NM_001004303, intron 1 of 19) L2c|LINE|L2 22133 NM_001004303 199920 Hs.437655 NM_001004303 ENSG00000187889 FYB2 ARAP|C1orf168 FYN binding protein 2 protein-coding chr22-867 chr22 37805224 37805434 + 13.0 0.000 5' UTR (NM_005318, exon 1 of 1) 5' UTR (NM_005318, exon 1 of 1) 222 NM_005318 3005 Hs.745024 NM_005318 ENSG00000189060 H1F0 H10|H1FV H1 histone family member 0 protein-coding chr12-801 chr12 6278601 6278811 + 13.0 0.000 Intergenic CpG -31730 NM_018173 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr1-5561 chr1 245074631 245074841 + 13.0 0.000 intron (NM_032328, intron 4 of 7) intron (NM_032328, intron 4 of 7) -80249 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr10-2881 chr10 100598905 100599115 + 13.0 0.000 Intergenic Intergenic 63067 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr6-2698 chr6 38025527 38025737 + 13.0 0.000 intron (NM_021943, intron 2 of 5) intron (NM_021943, intron 2 of 5) 205905 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr3-1899 chr3 149530783 149530993 + 13.0 0.000 intron (NM_001348362, intron 7 of 9) intron (NM_001348362, intron 7 of 9) 56191 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr6-1876 chr6 85690176 85690386 + 13.0 0.000 Intergenic MER70-int|LTR|ERVL -11548 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr20-1917 chr20 4135643 4135853 + 13.0 0.000 Intergenic Intergenic -13031 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr11-5883 chr11 12117774 12117984 + 13.0 0.000 intron (NM_001346293, intron 2 of 26) intron (NM_001346293, intron 2 of 26) 7289 NM_001346299 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr2-6835 chr2 68250229 68250439 + 13.0 0.000 intron (NM_000945, intron 1 of 5) intron (NM_000945, intron 1 of 5) 2198 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr2-3066 chr2 100610407 100610617 + 13.0 0.000 Intergenic Intergenic 6773 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr11-7285 chr11 36506325 36506535 + 13.0 0.000 intron (NM_145803, intron 1 of 7) intron (NM_145803, intron 1 of 7) 3842 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr12-2266 chr12 98626234 98626444 + 13.0 0.000 exon (NM_153687, exon 3 of 3) exon (NM_153687, exon 3 of 3) 18449 NM_201612 121457 Hs.252543 NM_153687 ENSG00000166130 IKBIP IKIP IKBKB interacting protein protein-coding chr22-1169 chr22 30594725 30594935 + 13.0 0.000 intron (NM_001282327, intron 2 of 16) AluJb|SINE|Alu -2920 NM_001243225 23481 Hs.517543 NM_014303 ENSG00000100029 PES1 NOP7|PES pescadillo ribosomal biogenesis factor 1 protein-coding chr2-4608 chr2 127884867 127885077 + 13.0 0.000 promoter-TSS (NM_031445) promoter-TSS (NM_031445) -112 NM_031445 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr9-3668 chr9 97473742 97473952 + 13.0 0.000 intron (NM_001302884, intron 10 of 15) MIR|SINE|MIR -27333 NM_001166116 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr5-4189 chr5 110817631 110817841 + 13.0 0.000 Intergenic Intergenic 78729 NM_138773 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding chr5-5716 chr5 168089648 168089858 + 13.0 0.000 intron (NM_001368145, intron 6 of 26) MIRb|SINE|MIR -76092 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chrX-294 chrX 103638926 103639136 + 13.0 0.000 Intergenic Intergenic 10056 NM_001006639 9338 Hs.95243 NM_004780 ENSG00000172465 TCEAL1 SIIR|WEX9|p21|pp21 transcription elongation factor A like 1 protein-coding chr14-1719 chr14 24532909 24533119 + 13.0 0.000 Intergenic Intergenic -24749 NM_001308083 1215 Hs.135626 NM_001836 ENSG00000092009 CMA1 CYH|MCT1|chymase chymase 1 protein-coding chr10-1528 chr10 73246965 73247175 + 13.0 0.000 promoter-TSS (NR_038373) promoter-TSS (NR_038373) 185 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding chr5-6625 chr5 41294874 41295084 + 13.0 0.000 Intergenic L2a|LINE|L2 -33510 NM_001115131 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding chr1-6127 chr1 160067381 160067591 + 13.0 0.000 intron (NM_002241, intron 1 of 1) intron (NM_002241, intron 1 of 1) 2674 NM_002241 3766 Hs.408960 NM_002241 ENSG00000177807 KCNJ10 BIRK-10|KCNJ13-PEN|KIR1.2|KIR4.1|SESAME potassium voltage-gated channel subfamily J member 10 protein-coding chr14-1673 chr14 69045958 69046168 + 13.0 0.000 Intergenic Intergenic 66381 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr5-2903 chr5 124537329 124537539 + 13.0 0.000 Intergenic X6B_LINE|LINE|CR1 -98914 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr2-9104 chr2 205704179 205704389 + 13.0 0.000 intron (NM_018534, intron 2 of 15) intron (NM_018534, intron 2 of 15) 21783 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr9-1584 chr9 89593213 89593423 + 13.0 0.000 Intergenic Intergenic -11694 NM_006705 10912 Hs.9701 NM_006705 ENSG00000130222 GADD45G CR6|DDIT2|GADD45gamma|GRP17 growth arrest and DNA damage inducible gamma protein-coding chr9-888 chr9 124856573 124856783 + 13.0 0.000 intron (NM_001276375, intron 6 of 8) intron (NM_001276375, intron 6 of 8) 3218 NM_001276375 401551 Hs.343383 NM_001045476 ENSG00000136918 WDR38 - WD repeat domain 38 protein-coding chr7-3343 chr7 77386484 77386694 + 13.0 0.000 intron (NR_146937, intron 6 of 31) Tigger17a|DNA|TcMar-Tigger -28609 NR_110073 101927243 Hs.547753 NR_110073 LOC101927243 - uncharacterized LOC101927243 ncRNA chr6-2977 chr6 40097412 40097622 + 13.0 0.000 Intergenic ERVL-B4-int|LTR|ERVL -163055 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr15-2848 chr15 40855591 40855801 + 13.0 0.000 intron (NM_001032367, intron 7 of 9) intron (NM_001032367, intron 7 of 9) -11172 NR_146468 102724362 Hs.569458 NR_146466 ENSG00000261183 SPINT1-AS1 - SPINT1 antisense RNA 1 ncRNA chr10-6570 chr10 78302170 78302380 + 13.0 0.000 Intergenic Intergenic 34933 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr2-3434 chr2 98479991 98480201 + 13.0 0.000 intron (NM_001351428, intron 1 of 24) intron (NM_001351428, intron 1 of 24) 34086 NM_001351428 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr15-1310 chr15 64749968 64750178 + 13.0 0.000 intron (NR_138363, intron 3 of 7) intron (NR_138363, intron 3 of 7) 11144 NR_138364 348093 Hs.436518 NM_194272 ENSG00000166831 RBPMS2 - RNA binding protein, mRNA processing factor 2 protein-coding chr1-9928 chr1 76046929 76047139 + 13.0 0.000 Intergenic Intergenic -27712 NM_001349105 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr3-1655 chr3 157248766 157248976 + 13.0 0.000 Intergenic Intergenic -88111 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr11-4113 chr11 35662033 35662243 + 13.0 0.000 promoter-TSS (NM_017583) promoter-TSS (NM_017583) -637 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr2-8675 chr2 149716760 149716970 + 13.0 0.000 intron (NR_110240, intron 1 of 2) intron (NR_110240, intron 1 of 2) -129090 NM_015702 27249 Hs.5324 NM_015702 ENSG00000168288 MMADHC C2orf25|CL25022|cblD metabolism of cobalamin associated D protein-coding chr4-1343 chr4 183285025 183285235 + 13.0 0.000 intron (NM_024949, intron 19 of 22) L2a|LINE|L2 35644 NM_001111319 53842 Hs.333179 NM_001111319 ENSG00000177300 CLDN22 CLDN21 claudin 22 protein-coding chr3-1981 chr3 141660122 141660332 + 13.0 0.000 Intergenic CpG -2972 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr4-1504 chr4 55539794 55540004 + 13.0 0.000 intron (NM_004898, intron 1 of 22) intron (NM_004898, intron 1 of 22) 6033 NM_001267843 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr12-2494 chr12 78754221 78754431 + 13.0 0.000 Intergenic L2c|LINE|L2 -109656 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr15-839 chr15 51403184 51403394 + 13.0 0.000 intron (NM_001330297, intron 9 of 9) intron (NM_001330297, intron 9 of 9) 26043 NM_001330297 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr20-803 chr20 10435224 10435434 + 13.0 0.000 promoter-TSS (NM_001009608) promoter-TSS (NM_001009608) 24 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr1-1732 chr1 85308331 85308541 + 13.0 0.000 Intergenic Intergenic -31804 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr18-1897 chr18 30378227 30378437 + 13.0 0.000 Intergenic Intergenic 79422 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr9-3534 chr9 35845006 35845216 + 13.0 0.000 intron (NM_001042589, intron 7 of 13) L4_A_Mam|LINE|RTE-X 15883 NM_001363621 51754 Hs.9187 NM_016446 ENSG00000137103 TMEM8B C9orf127|FP588|LINC00950|NAG-5|NAG5|NGX6 transmembrane protein 8B protein-coding chr11-7156 chr11 127902211 127902421 + 13.0 0.000 Intergenic Intergenic -306450 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr11-6507 chr11 68807025 68807235 + 13.0 0.000 intron (NM_001031847, intron 4 of 18) intron (NM_001031847, intron 4 of 18) 34786 NM_001876 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr2-1228 chr2 28390293 28390503 + 13.0 0.000 intron (NR_103831, intron 1 of 1) CpG -2460 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr11-1904 chr11 62533202 62533412 + 13.0 0.000 exon (NM_001620, exon 5 of 5) exon (NM_001620, exon 5 of 5) 12357 NM_001346446 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding chr6-775 chr6 44058646 44058856 + 13.0 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 15901 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr12-2479 chr12 67678742 67678952 + 13.0 0.000 Intergenic MIRb|SINE|MIR 30102 NM_003583 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr3-3170 chr3 178811622 178811832 + 13.0 0.000 intron (NM_181361, intron 2 of 4) L1ME3D|LINE|L1 48678 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr9-1187 chr9 106698082 106698292 + 13.0 0.000 Intergenic Intergenic 82129 NR_104145 100996590 Hs.147110 NR_104145 ENSG00000234323 LINC01505 - long intergenic non-protein coding RNA 1505 ncRNA chr2-3102 chr2 138601208 138601418 + 13.0 0.000 Intergenic Intergenic 99543 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr3-1350 chr3 156388700 156388910 + 13.0 0.000 intron (NM_172159, intron 1 of 13) intron (NM_172159, intron 1 of 13) 58131 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr6-1449 chr6 163533541 163533751 + 13.0 0.000 intron (NM_206853, intron 3 of 6) MER119|DNA|hAT-Charlie 118928 NM_006775 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr5-1363 chr5 59042572 59042782 + 13.0 0.000 intron (NM_006203, intron 5 of 14) intron (NM_006203, intron 5 of 14) -3201 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr12-1094 chr12 111842588 111842798 + 13.0 0.000 promoter-TSS (NR_152608) promoter-TSS (NR_152608) 312 NR_015404 51275 Hs.333120 NR_015404 ENSG00000234608 MAPKAPK5-AS1 C12orf47 MAPKAPK5 antisense RNA 1 ncRNA chr15-1081 chr15 41867825 41868035 + 13.0 0.000 intron (NM_016642, intron 34 of 67) intron (NM_016642, intron 34 of 67) -1379 NR_036195 100423013 NR_036195 ENSG00000264850 MIR4310 - microRNA 4310 ncRNA chr2-2799 chr2 30492524 30492734 + 13.0 0.000 intron (NM_001304445, intron 3 of 7) intron (NM_001304445, intron 3 of 7) 45383 NM_001304445 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr2-2426 chr2 38827658 38827868 + 13.0 0.000 intron (NM_001329963, intron 14 of 23) intron (NM_001329963, intron 14 of 23) 48171 NM_198963 90957 Hs.468226 NM_198963 ENSG00000163214 DHX57 DDX57 DExH-box helicase 57 protein-coding chr6-4864 chr6 87997217 87997427 + 13.0 0.000 Intergenic Intergenic -50519 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr13-1013 chr13 30305462 30305672 + 13.0 0.000 intron (NM_032116, intron 1 of 10) MIRb|SINE|MIR 1444 NM_001014380 84056 Hs.243596 NM_032116 ENSG00000102781 KATNAL1 - katanin catalytic subunit A1 like 1 protein-coding chr12-5177 chr12 103976654 103976864 + 13.0 0.000 intron (NM_001363612, intron 1 of 8) intron (NM_001363612, intron 1 of 8) 10887 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr16-1458 chr16 85072736 85072946 + 13.0 0.000 intron (NM_001286566, intron 3 of 11) intron (NM_001286566, intron 3 of 11) 9629 NM_001286565 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chr17-1297 chr17 43407486 43407696 + 13.0 0.000 Intergenic Intergenic 8598 NM_001661 379 Hs.183153 NM_001661 ENSG00000175906 ARL4D ARF4L|ARL6 ADP ribosylation factor like GTPase 4D protein-coding chr16-3070 chr16 58817193 58817403 + 13.0 0.000 Intergenic Intergenic -82982 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr22-1098 chr22 35453152 35453362 + 13.0 0.000 Intergenic Intergenic 53117 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|MGORS8|P1-CDC46 minichromosome maintenance complex component 5 protein-coding chr18-999 chr18 35415629 35415839 + 13.0 0.000 Intergenic Intergenic -38397 NM_145756 252884 Hs.351005 NM_145756 ENSG00000186496 ZNF396 ZSCAN14 zinc finger protein 396 protein-coding chr10-2093 chr10 120429453 120429663 + 13.0 0.000 Intergenic Intergenic -27396 NM_001318167 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr7-2159 chr7 52941032 52941242 + 13.0 0.000 Intergenic Intergenic -94496 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr7-1838 chr7 134690723 134690933 + 13.0 0.000 Intergenic Intergenic 43975 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr12-5387 chr12 120609309 120609519 + 13.0 0.000 Intergenic HERVL-int|LTR|ERVL -28012 NM_015918 51367 Hs.279913 NM_015918 ENSG00000167272 POP5 HSPC004|RPP2|RPP20|hPop5 POP5 homolog, ribonuclease P/MRP subunit protein-coding chr2-2181 chr2 26902875 26903085 + 13.0 0.000 intron (NM_020134, intron 2 of 12) MER41A|LTR|ERV1 54556 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr11-2456 chr11 45902588 45902798 + 13.0 0.000 exon (NM_005456, exon 5 of 12) exon (NM_005456, exon 5 of 12) 4578 NM_001080446 143678 NM_001080446 ENSG00000234776 C11orf94 - chromosome 11 open reading frame 94 protein-coding chr19-1512 chr19 646099 646309 + 13.0 0.000 Intergenic Intergenic 6278 NM_020637 27006 Hs.248087 NM_020637 ENSG00000070388 FGF22 - fibroblast growth factor 22 protein-coding chr10-4210 chr10 115762176 115762386 + 13.0 0.000 intron (NM_207303, intron 27 of 28) MamRTE1|LINE|RTE-BovB 432508 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr3-1971 chr3 122794024 122794234 + 13.0 0.000 promoter-TSS (NM_024610) promoter-TSS (NM_024610) -298 NM_024610 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr20-346 chr20 5066089 5066299 + 13.0 0.000 Intergenic Intergenic 46882 NM_001009923 29058 Hs.472024 NM_014145 ENSG00000089063 TMEM230 C20orf30|HSPC274|dJ1116H23.2.1 transmembrane protein 230 protein-coding chr8-2384 chr8 48409372 48409582 + 13.0 0.000 Intergenic Intergenic -142090 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr3-1715 chr3 68666697 68666907 + 13.0 0.000 Intergenic Intergenic 166165 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr5-5084 chr5 96651090 96651300 + 13.0 0.000 Intergenic Intergenic -10842 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr15-1352 chr15 63896935 63897145 + 13.0 0.000 Intergenic Intergenic -26021 NR_029944 494334 NR_029944 ENSG00000199156 MIR422A MIRN422A microRNA 422a ncRNA chr17-2182 chr17 64793007 64793217 + 13.0 0.000 intron (NR_024386, intron 7 of 10) intron (NR_024386, intron 7 of 10) -11113 NR_026899 109286553 Hs.117853 NR_026899 ENSG00000215769 ARHGAP27P1-BPTFP1-KPNA2P3 - ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene pseudo chr2-4538 chr2 43356732 43356942 + 13.0 0.000 intron (NM_001083953, intron 29 of 37) MER119|DNA|hAT-Charlie 129626 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr17-2147 chr17 42175013 42175223 + 13.0 0.000 intron (NM_012285, intron 6 of 16) intron (NM_012285, intron 6 of 16) 6024 NM_012285 23415 Hs.304081 NM_012285 ENSG00000089558 KCNH4 BEC2|ELK1|Kv12.3 potassium voltage-gated channel subfamily H member 4 protein-coding chr19-2544 chr19 44875691 44875901 + 13.0 0.000 intron (NM_001042724, intron 5 of 8) intron (NM_001042724, intron 5 of 8) -15424 NM_001128916 10452 Hs.655909 NM_006114 ENSG00000130204 TOMM40 C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 translocase of outer mitochondrial membrane 40 protein-coding chr6-4260 chr6 9515741 9515951 + 13.0 0.000 Intergenic Intergenic 863637 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr2-5338 chr2 86037505 86037715 + 13.0 0.000 intron (NM_015425, intron 27 of 33) intron (NM_015425, intron 27 of 33) 68276 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr5-2721 chr5 117568762 117568972 + 13.0 0.000 intron (NR_046089, intron 5 of 5) intron (NR_046089, intron 5 of 5) 153355 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr12-1373 chr12 54935378 54935588 + 13.0 0.000 Intergenic L3b|LINE|CR1 38249 NM_001351153 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|ITPRID3|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr8-1456 chr8 144458608 144458818 + 13.0 0.000 intron (NM_138496, intron 2 of 4) intron (NM_138496, intron 2 of 4) 3826 NR_162109 113218512 NR_162109 MIR10400 - microRNA 10400 ncRNA chr16-1834 chr16 59633862 59634072 + 13.0 0.000 Intergenic Intergenic 121224 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr5-2921 chr5 135535283 135535493 + 13.0 0.000 exon (NM_006161, exon 1 of 1) exon (NM_006161, exon 1 of 1) 576 NM_006161 4762 Hs.248149 NM_006161 ENSG00000181965 NEUROG1 AKA|Math4C|NEUROD3|bHLHa6|ngn1 neurogenin 1 protein-coding chr18-2170 chr18 58470489 58470699 + 13.0 0.000 Intergenic Intergenic -19442 NR_039899 100616357 NR_039899 ENSG00000207778 MIR3591 - microRNA 3591 ncRNA chr13-949 chr13 100363356 100363566 + 13.0 0.000 intron (NR_148031, intron 18 of 22) intron (NR_148031, intron 18 of 22) 117554 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr2-5636 chr2 190943079 190943289 + 13.0 0.000 intron (NM_014905, intron 14 of 17) intron (NM_014905, intron 14 of 17) 62363 NM_001256310 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr16-2802 chr16 59773015 59773225 + 13.0 0.000 Intergenic L1MA9|LINE|L1 -17929 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr4-1635 chr4 85776027 85776237 + 13.0 0.000 intron (NM_001025616, intron 3 of 9) intron (NM_001025616, intron 3 of 9) -2666 NM_001346093 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr11-2849 chr11 4007132 4007342 + 13.0 0.000 intron (NM_001277962, intron 2 of 12) intron (NM_001277962, intron 2 of 12) -87448 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr14-1239 chr14 103527490 103527700 + 13.0 0.000 Intergenic Intergenic -1601 NM_152307 115708 Hs.525610 NM_152307 ENSG00000166166 TRMT61A C14orf172|GCD14|Gcd14p|TRM61|hTRM61 tRNA methyltransferase 61A protein-coding chr10-2836 chr10 34699060 34699270 + 13.0 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 116131 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr8-1441 chr8 133360379 133360589 + 13.0 0.000 Intergenic Intergenic -63180 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr12-2558 chr12 109352317 109352527 + 13.0 0.000 Intergenic Intergenic 7066 NR_120462 101928138 Hs.143843 NR_120462 ENSG00000256560 LINC01486 - long intergenic non-protein coding RNA 1486 ncRNA chr12-1784 chr12 112515008 112515218 + 13.0 0.000 Intergenic AluSz6|SINE|Alu -60123 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr1-7619 chr1 2116632 2116842 + 13.0 0.000 intron (NM_001033582, intron 1 of 14) L1MEg|LINE|L1 12021 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr5-3570 chr5 66987270 66987480 + 13.0 0.000 TTS (NM_198828) TTS (NM_198828) 16779 NR_111908 101928794 Hs.672435 NR_111908 MAST4-AS1 - MAST4 antisense RNA 1 ncRNA chr5-1300 chr5 36690397 36690607 + 13.0 0.000 Intergenic CpG 83896 NM_001166695 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr2-2785 chr2 10344755 10344965 + 13.0 0.000 intron (NM_001258357, intron 1 of 4) intron (NM_001258357, intron 1 of 4) 14697 NM_001258357 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr10-2803 chr10 449747 449957 + 13.0 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -178712 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr10-1773 chr10 63553032 63553242 + 13.0 0.000 intron (NM_001001330, intron 1 of 7) intron (NM_001001330, intron 1 of 7) -31247 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr3-5756 chr3 21605305 21605515 + 13.0 0.000 intron (NM_024697, intron 2 of 7) intron (NM_024697, intron 2 of 7) 62621 NR_046731 100874216 Hs.661720 NR_046731 ENSG00000225542 ZNF385D-AS1 - ZNF385D antisense RNA 1 ncRNA chr4-3065 chr4 143344789 143344999 + 13.0 0.000 intron (NM_207123, intron 1 of 10) intron (NM_207123, intron 1 of 10) 1434 NR_036091 100423017 NR_036091 ENSG00000265623 MIR3139 - microRNA 3139 ncRNA chr16-2465 chr16 86273951 86274161 + 13.0 0.000 intron (NR_104139, intron 2 of 5) intron (NR_104139, intron 2 of 5) 12191 NR_104139 101154687 Hs.640512 NR_104139 LINC01081 TCONS00024764|TCONS_00024764 long intergenic non-protein coding RNA 1081 ncRNA chr10-4172 chr10 94648189 94648399 + 13.0 0.000 Intergenic Intergenic -35435 NM_000772 1562 Hs.511872 NM_000772 ENSG00000108242 CYP2C18 CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 cytochrome P450 family 2 subfamily C member 18 protein-coding chr7-3646 chr7 43843252 43843462 + 13.0 0.000 Intergenic LTR9D|LTR|ERV1 26160 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr17-1348 chr17 44070524 44070734 + 13.0 0.000 promoter-TSS (NM_001319945) promoter-TSS (NM_001319945) -101 NM_138387 92579 Hs.294005 NM_138387 ENSG00000141349 G6PC3 SCN4|UGRP glucose-6-phosphatase catalytic subunit 3 protein-coding chr5-3620 chr5 134351058 134351268 + 13.0 0.000 intron (NM_001113575, intron 3 of 12) L2|LINE|L2 15911 NM_016508 51265 Hs.719926 NM_016508 ENSG00000006837 CDKL3 NKIAMRE cyclin dependent kinase like 3 protein-coding chr17-1420 chr17 81939957 81940167 + 13.0 0.000 3' UTR (NM_001145113, exon 3 of 3) 3' UTR (NM_001145113, exon 3 of 3) -2734 NM_001330523 5831 Hs.163451 NM_006907 ENSG00000183010 PYCR1 ARCL2B|ARCL3B|P5C|P5CR|PIG45|PP222|PRO3|PYCR pyrroline-5-carboxylate reductase 1 protein-coding chr5-2783 chr5 177013891 177014101 + 13.0 0.000 Intergenic MER68|LTR|ERVL -7202 NM_001199297 51720 Hs.232721 NM_016290 ENSG00000087206 UIMC1 RAP80|X2HRIP110 ubiquitin interaction motif containing 1 protein-coding chr11-3883 chr11 96247118 96247328 + 13.0 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -94215 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr10-1542 chr10 91756419 91756629 + 13.0 0.000 Intergenic MSTC|LTR|ERVL-MaLR 41672 NR_108070 100507633 Hs.291528 NR_108070 ENSG00000228701 TNKS2-AS1 - TNKS2 antisense RNA 1 (head to head) ncRNA chr16-4692 chr16 81013726 81013936 + 13.0 0.000 intron (NM_001100624, intron 2 of 10) L1ME1|LINE|L1 -6912 NR_147838 56942 Hs.55028 NM_020188 ENSG00000103121 CMC2 2310061C15Rik|C16orf61|DC13 C-X9-C motif containing 2 protein-coding chr6-1103 chr6 99393685 99393895 + 13.0 0.000 intron (NM_017421, intron 1 of 6) CpG 405 NM_017421 51805 Hs.713623 NM_017421 ENSG00000132423 COQ3 DHHBMT|DHHBMTASE|UG0215E05|bA9819.1 coenzyme Q3, methyltransferase protein-coding chr19-1515 chr19 1311758 1311968 + 13.0 0.000 Intergenic Intergenic 25990 NM_001405 1943 NM_001405 ENSG00000099617 EFNA2 ELF-1|EPLG6|HEK7-L|LERK-6|LERK6 ephrin A2 protein-coding chr4-3763 chr4 88710182 88710392 + 13.0 0.000 intron (NR_002806, intron 1 of 4) intron (NR_002806, intron 1 of 4) 498 NR_002806 285512 Hs.744957 NR_002806 ENSG00000248019 FAM13A-AS1 FAM13A1OS|FAM13AOS|NCRNA00039 FAM13A antisense RNA 1 ncRNA chr12-2134 chr12 94405881 94406091 + 13.0 0.000 intron (NM_001042399, intron 3 of 15) L1MEc|LINE|L1 53881 NM_001346461 51134 Hs.279209 NM_016122 ENSG00000173588 CEP83 CCDC41|NPHP18|NY-REN-58 centrosomal protein 83 protein-coding chr9-2068 chr9 37309299 37309509 + 13.0 0.000 intron (NR_110317, intron 4 of 7) L2|LINE|L2 -113292 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr19-2684 chr19 16148980 16149190 + 13.0 0.000 intron (NR_163156, intron 2 of 4) MIR|SINE|MIR 5400 NM_001352265 84941 Hs.631617 NM_032855 ENSG00000196684 HSH2D ALX|HSH2 hematopoietic SH2 domain containing protein-coding chr5-1628 chr5 124447425 124447635 + 13.0 0.000 Intergenic L2b|LINE|L2 -9010 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr21-611 chr21 29332743 29332953 + 13.0 0.000 intron (NR_027655, intron 4 of 7) intron (NR_027655, intron 4 of 7) 27644 NR_027655 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding chr7-3551 chr7 14092293 14092503 + 13.0 0.000 Intergenic Intergenic -100973 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr17-1794 chr17 79838459 79838669 + 13.0 0.000 intron (NM_003655, intron 2 of 4) intron (NM_003655, intron 2 of 4) 876 NM_003655 8535 Hs.405046 NM_003655 ENSG00000141582 CBX4 NBP16|PC2 chromobox 4 protein-coding chr2-3330 chr2 190927268 190927478 + 13.0 0.000 exon (NM_001256310, exon 12 of 15) exon (NM_001256310, exon 12 of 15) 46552 NM_001256310 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr21-1033 chr21 24420174 24420384 + 13.0 0.000 Intergenic MER41A|LTR|ERV1 -8461 NR_135521 105372751 Hs.652040 NR_135519 ENSG00000237484 LINC01684 lnc-JAM2-6 long intergenic non-protein coding RNA 1684 ncRNA chr6-3074 chr6 75349778 75349988 + 13.0 0.000 intron (NM_001300866, intron 4 of 6) intron (NM_001300866, intron 4 of 6) -33303 NR_125859 101928540 Hs.526972 NR_125859 LOC101928540 - uncharacterized LOC101928540 ncRNA chr17-1273 chr17 65123367 65123577 + 13.0 0.000 Intergenic CpG -13866 NM_001165933 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr5-1327 chr5 134225356 134225566 + 13.0 0.000 promoter-TSS (NR_149151) promoter-TSS (NR_149151) 93 NR_149151 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr16-2370 chr16 61617077 61617287 + 13.0 0.000 Intergenic Intergenic 419256 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr6-2884 chr6 8465337 8465547 + 13.0 0.000 intron (NR_038980, intron 2 of 4) L2a|LINE|L2 29819 NR_038980 100506207 Hs.311049 NR_038979 ENSG00000285219 LOC100506207 - uncharacterized LOC100506207 ncRNA chr9-2195 chr9 134269476 134269686 + 13.0 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 25816 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chrX-614 chrX 154737966 154738176 + 13.0 0.000 intron (NR_104114, intron 1 of 8) L3|LINE|CR1 13006 NM_001081573 139716 Hs.496982 NM_080612 ENSG00000160219 GAB3 - GRB2 associated binding protein 3 protein-coding chr11-6863 chr11 101123648 101123858 + 13.0 0.000 intron (NM_000926, intron 2 of 7) intron (NM_000926, intron 2 of 7) 5310 NM_001271161 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr10-1494 chr10 5434458 5434668 + 13.0 0.000 intron (NM_001047160, intron 3 of 11) HAL1M8|LINE|L1 -11988 NR_073040 10276 Hs.25155 NM_005863 ENSG00000173848 NET1 ARHGEF8|NET1A neuroepithelial cell transforming 1 protein-coding chr7-2652 chr7 2837361 2837571 + 13.0 0.000 intron (NM_001293092, intron 1 of 2) L1MEf|LINE|L1 6842 NM_001293092 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr2-1795 chr2 23480822 23481032 + 13.0 0.000 intron (NM_052920, intron 2 of 13) L4_A_Mam|LINE|RTE-X 95748 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr16-2429 chr16 77581736 77581946 + 13.0 0.000 Intergenic Intergenic -140651 NM_001243661 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr1-9963 chr1 79792599 79792809 + 13.0 0.000 Intergenic LTR45C|LTR|ERV1 -743051 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr17-2237 chr17 5437757 5437967 + 13.0 0.000 intron (NM_001212, intron 2 of 5) intron (NM_001212, intron 2 of 5) 1293 NM_001212 708 Hs.555866 NM_001212 ENSG00000108561 C1QBP COXPD33|GC1QBP|HABP1|SF2AP32|SF2p32|gC1Q-R|gC1qR|p32 complement C1q binding protein protein-coding chr7-1685 chr7 134816085 134816295 + 13.0 0.000 intron (NM_033157, intron 1 of 14) intron (NM_033157, intron 1 of 14) 36556 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr1-1779 chr1 27341898 27342108 + 13.0 0.000 promoter-TSS (NM_001193308) promoter-TSS (NM_001193308) -19 NM_001193308 84958 Hs.469175 NM_032872 ENSG00000142765 SYTL1 JFC1|SLP1 synaptotagmin like 1 protein-coding chr7-2148 chr7 44563225 44563435 + 13.0 0.000 Intergenic Intergenic 11208 NM_001257189 54606 Hs.654762 NM_019082 ENSG00000136271 DDX56 DDX21|DDX26|NOH61 DEAD-box helicase 56 protein-coding chr17-3229 chr17 16171669 16171879 + 13.0 0.000 intron (NM_001190438, intron 1 of 18) intron (NM_001190438, intron 1 of 18) -18578 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr14-1848 chr14 67137856 67138066 + 13.0 0.000 intron (NM_001024218, intron 16 of 21) intron (NM_001024218, intron 16 of 21) -51479 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding chr3-4961 chr3 11288188 11288398 + 13.0 0.000 intron (NM_001349232, intron 3 of 20) L3|LINE|CR1 15896 NM_001349232 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr12-1466 chr12 5593247 5593457 + 13.0 0.000 intron (NM_001278596, intron 21 of 25) UCON84|Unknown|Unknown 99220 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr15-361 chr15 78811351 78811561 + 13.0 0.000 promoter-TSS (NM_014272) promoter-TSS (NM_014272) 8 NM_014272 11173 Hs.16441 NM_014272 ENSG00000136378 ADAMTS7 ADAM-TS 7|ADAM-TS7|ADAMTS-7 ADAM metallopeptidase with thrombospondin type 1 motif 7 protein-coding chr2-7751 chr2 38491231 38491441 + 13.0 0.000 intron (NR_110259, intron 2 of 4) intron (NR_110259, intron 2 of 4) 24404 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chr16-2410 chr16 71050431 71050641 + 13.0 0.000 intron (NM_017558, intron 18 of 19) L1MC1|LINE|L1 180186 NM_001270974 54768 Hs.351914 NM_017558 ENSG00000157423 HYDIN CILD5|HYDIN1|HYDIN2|PPP1R31 HYDIN axonemal central pair apparatus protein protein-coding chr1-2230 chr1 157106483 157106693 + 13.0 0.000 Intergenic Intergenic -6780 NM_001004341 440695 Hs.127138 NM_001004341 ENSG00000253831 ETV3L - ETS variant 3 like protein-coding chr10-1735 chr10 116538582 116538792 + 13.0 0.000 Intergenic MER44D|DNA|TcMar-Tigger -7244 NM_000936 5406 Hs.501135 NM_000936 ENSG00000175535 PNLIP PL|PNLIPD|PTL pancreatic lipase protein-coding chr1-4959 chr1 53444666 53444876 + 13.0 0.000 Intergenic LTR13|LTR|ERVK -4751 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr7-3239 chr7 1638354 1638564 + 13.0 0.000 Intergenic Intergenic 23989 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr2-6760 chr2 41763379 41763589 + 13.0 0.000 Intergenic Intergenic -114071 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr3-882 chr3 195954439 195954649 + 13.0 0.000 Intergenic CpG 35735 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr14-1308 chr14 44232401 44232611 + 13.0 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 274777 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr9-3805 chr9 128389658 128389868 + 13.0 0.000 non-coding (NR_049743, exon 5 of 5) non-coding (NR_049743, exon 5 of 5) -2858 NR_039815 100616335 NR_039815 ENSG00000283335 MIR219B MIR2964A|hsa-mir-219b|mir-219b microRNA 219b ncRNA chr19-3935 chr19 49034088 49034298 + 13.0 0.000 TTS (NM_033378) TTS (NM_033378) 2281 NM_001319065 114336 Hs.567650 NM_033378 ENSG00000104818 CGB2 - chorionic gonadotropin subunit beta 2 protein-coding chr2-3147 chr2 188050928 188051138 + 13.0 0.000 intron (NR_126396, intron 2 of 2) intron (NR_126396, intron 2 of 2) 236658 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr6-701 chr6 43579295 43579505 + 13.0 0.000 intron (NM_001291969, intron 1 of 8) MER21A|LTR|ERVL 3215 NM_001291970 5429 Hs.655467 NM_006502 ENSG00000170734 POLH RAD30|RAD30A|XP-V|XPV DNA polymerase eta protein-coding chr10-2081 chr10 110522349 110522559 + 13.0 0.000 Intergenic Intergenic 24547 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr2-7133 chr2 191123146 191123356 + 13.0 0.000 intron (NM_003151, intron 3 of 23) intron (NM_003151, intron 3 of 23) 27743 NM_003151 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr9-2555 chr9 132358794 132359004 + 13.0 0.000 Intergenic MER6A|DNA|TcMar-Tigger -3913 NM_015046 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr9-4761 chr9 132703409 132703619 + 13.0 0.000 Intergenic MER101-int|LTR|ERV1 33050 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr1-4008 chr1 171292891 171293101 + 13.0 0.000 Intergenic PRIMA4-int|LTR|ERV1 -21187 NM_002022 2329 Hs.386502 NM_002022 ENSG00000076258 FMO4 FMO2 flavin containing dimethylaniline monoxygenase 4 protein-coding chr2-8379 chr2 111943183 111943393 + 13.0 0.000 intron (NM_006343, intron 2 of 18) intron (NM_006343, intron 2 of 18) 44681 NM_006343 10461 Hs.306178 NM_006343 ENSG00000153208 MERTK MER|RP38|Tyro12|c-Eyk|c-mer MER proto-oncogene, tyrosine kinase protein-coding chr3-1667 chr3 183449740 183449950 + 13.0 0.000 intron (NR_038301, intron 1 of 3) intron (NR_038301, intron 1 of 3) -2014 NR_145727 109616971 NR_145727 ENSG00000201229 SNORA63D - small nucleolar RNA, H/ACA box 63D snoRNA chr10-2740 chr10 115050132 115050342 + 13.0 0.000 Intergenic Intergenic -43128 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr5-4536 chr5 16626391 16626601 + 13.0 0.000 intron (NR_109946, intron 3 of 3) intron (NR_109946, intron 3 of 3) -9438 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr5-4033 chr5 37373809 37374019 + 13.0 0.000 Intergenic LTR64|LTR|ERV1 -2808 NM_153485 9631 Hs.547696 NM_004298 ENSG00000113569 NUP155 ATFB15|N155 nucleoporin 155 protein-coding chr19-5076 chr19 51152176 51152386 + 13.0 0.000 TTS (NR_110732) TTS (NR_110732) 9822 NR_102350 27036 Hs.655393 NM_014385 ENSG00000168995 SIGLEC7 AIRM1|CD328|CDw328|D-siglec|QA79|SIGLEC-7|SIGLEC19P|SIGLECP2|p75|p75/AIRM1 sialic acid binding Ig like lectin 7 protein-coding chr1-9616 chr1 45872060 45872270 + 13.0 0.000 intron (NM_001324321, intron 1 of 28) intron (NM_001324321, intron 1 of 28) 7817 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr20-1480 chr20 9119778 9119988 + 13.0 0.000 intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) 50829 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr18-2317 chr18 80257797 80258007 + 13.0 0.000 Intergenic LTR13|LTR|ERVK -10388 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr5-2604 chr5 128084562 128084772 + 13.0 0.000 non-coding (NR_046207, exon 1 of 27) non-coding (NR_046207, exon 1 of 27) 901 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr6-1238 chr6 154164433 154164643 + 13.0 0.000 intron (NM_015553, intron 11 of 11) intron (NM_015553, intron 11 of 11) 74776 NM_001285528 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr8-2739 chr8 102937463 102937673 + 13.0 0.000 intron (NR_126339, intron 2 of 2) intron (NR_126339, intron 2 of 2) 73297 NR_126339 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA chr4-1224 chr4 168812320 168812530 + 13.0 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -19670 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chrX-1818 chrX 98170041 98170251 + 13.0 0.000 Intergenic Intergenic -605611 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr7-7291 chr7 39116320 39116530 + 13.0 0.000 intron (NM_001370959, intron 2 of 9) intron (NM_001370959, intron 2 of 9) -102858 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr8-1838 chr8 142406431 142406641 + 13.0 0.000 Intergenic Intergenic -3354 NM_001366902 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr6-2733 chr6 75603748 75603958 + 13.0 0.000 intron (NM_001100409, intron 1 of 22) intron (NM_001100409, intron 1 of 22) 1973 NM_015571 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding chr8-1763 chr8 48305460 48305670 + 13.0 0.000 Intergenic Intergenic -246002 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr16-1122 chr16 24670803 24671013 + 13.0 0.000 intron (NR_122072, intron 1 of 2) intron (NR_122072, intron 1 of 2) 154 NR_122072 400511 Hs.592028 NR_122072 ENSG00000224310 LINC01567 LOCCS long intergenic non-protein coding RNA 1567 ncRNA chr7-2224 chr7 128091086 128091296 + 13.0 0.000 intron (NM_014390, intron 22 of 23) L2a|LINE|L2 9330 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr1-2778 chr1 163077387 163077597 + 13.0 0.000 TTS (NM_005613) TTS (NM_005613) 5587 NM_001113380 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G protein signaling 4 protein-coding chr15-568 chr15 87154871 87155081 + 13.0 0.000 Intergenic MIR|SINE|MIR -166550 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA chr15-2167 chr15 78642715 78642925 + 13.0 0.000 Intergenic Intergenic -1610 NM_000750 1143 Hs.624178 NM_000750 ENSG00000117971 CHRNB4 - cholinergic receptor nicotinic beta 4 subunit protein-coding chr11-5221 chr11 16785616 16785826 + 13.0 0.000 intron (NM_001329630, intron 24 of 26) intron (NM_001329630, intron 24 of 26) 47074 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr14-827 chr14 22653142 22653352 + 13.0 0.000 Intergenic Intergenic -18403 NM_001348233 79549 NM_001348233 ENSG00000255804 OR6J1 OR6J1P|OR6J2 olfactory receptor family 6 subfamily J member 1 (gene/pseudogene) protein-coding chr21-704 chr21 31346359 31346569 + 13.0 0.000 intron (NM_001353690, intron 1 of 27) intron (NM_001353690, intron 1 of 27) -2110 NM_001353686 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr9-2345 chr9 77218702 77218912 + 13.0 0.000 intron (NM_001018038, intron 10 of 68) Cheshire|DNA|hAT-Charlie -40890 NR_026668 100286938 Hs.662256 NR_026668 ENSG00000232998 VPS13A-AS1 - VPS13A antisense RNA 1 ncRNA chr8-1777 chr8 69548094 69548304 + 13.0 0.000 intron (NR_156414, intron 2 of 20) intron (NR_156414, intron 2 of 20) -44701 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr2-3558 chr2 26988594 26988804 + 13.0 0.000 intron (NR_149018, intron 3 of 5) MER5A|DNA|hAT-Charlie 18062 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chrX-1217 chrX 74534634 74534844 + 13.0 0.000 TTS (NM_006517) TTS (NM_006517) 79885 NM_016120 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr16-1206 chr16 55371080 55371290 + 13.0 0.000 Intergenic Intergenic 46626 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr1-5249 chr1 202488186 202488396 + 13.0 0.000 intron (NM_032104, intron 1 of 12) MER44B|DNA|TcMar-Tigger 25577 NM_032103 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr19-2420 chr19 38062577 38062787 + 13.0 0.000 intron (NM_015073, intron 2 of 21) AluSx|SINE|Alu -100414 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr19-1199 chr19 900440 900650 + 13.0 0.000 intron (NM_138774, intron 4 of 7) intron (NM_138774, intron 4 of 7) 7061 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr12-3284 chr12 71186953 71187163 + 13.0 0.000 Intergenic L1PBa|LINE|L1 -29059 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr11-3672 chr11 128451767 128451977 + 13.0 0.000 Intergenic CpG 70438 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr16-1503 chr16 18932641 18932851 + 13.0 0.000 Intergenic Intergenic -6342 NM_015092 23049 Hs.460179 NM_015092 ENSG00000157106 SMG1 61E3.4|ATX|LIP SMG1 nonsense mediated mRNA decay associated PI3K related kinase protein-coding chr18-2260 chr18 73420036 73420246 + 13.0 0.000 Intergenic L1MD2|LINE|L1 95200 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr14-1187 chr14 67228450 67228660 + 13.0 0.000 TTS (NM_173526) TTS (NM_173526) -12880 NM_001256550 64398 Hs.652312 NM_022474 ENSG00000072415 MPP5 PALS1 membrane palmitoylated protein 5 protein-coding chr6-2530 chr6 6788572 6788782 + 13.0 0.000 Intergenic LTR33|LTR|ERVL -165851 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr7-2863 chr7 112790132 112790342 + 13.0 0.000 non-coding (NR_109840, exon 1 of 4) non-coding (NR_109840, exon 1 of 4) 156 NM_022484 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding chr19-1487 chr19 16001894 16002104 + 13.0 0.000 Intergenic HERV3-int|LTR|ERV1 -13635 NR_026828 126536 Hs.131824 NR_026828 ENSG00000205396 LINC00661 - long intergenic non-protein coding RNA 661 ncRNA chr8-2323 chr8 144177286 144177496 + 13.0 0.000 intron (NM_001099281, intron 3 of 11) intron (NM_001099281, intron 3 of 11) 28746 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr5-4745 chr5 51876682 51876892 + 13.0 0.000 Intergenic Intergenic -131244 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr9-5599 chr9 114771450 114771660 + 13.0 0.000 Intergenic L1ME2|LINE|L1 20975 NM_001204344 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr15-2588 chr15 60365448 60365658 + 13.0 0.000 intron (NM_001002857, intron 4 of 13) intron (NM_001002857, intron 4 of 13) 32433 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr22-675 chr22 17846669 17846879 + 13.0 0.000 intron (NM_001122731, intron 18 of 19) intron (NM_001122731, intron 18 of 19) 60112 NM_001136004 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr9-1833 chr9 134257177 134257387 + 13.0 0.000 Intergenic Intergenic 38115 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chrX-2696 chrX 119606621 119606831 + 13.0 0.000 promoter-TSS (NM_001173487) promoter-TSS (NM_001173487) -843 NM_001173487 55922 Hs.437084 NM_017544 ENSG00000186416 NKRF ITBA4|NRF NFKB repressing factor protein-coding chr11-3796 chr11 64484694 64484904 + 13.0 0.000 Intergenic MER41B|LTR|ERV1 35742 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr4-2988 chr4 119209229 119209439 + 13.0 0.000 intron (NR_125931, intron 1 of 2) intron (NR_125931, intron 1 of 2) -3293 NM_019050 54532 Hs.431081 NM_019050 ENSG00000145390 USP53 - ubiquitin specific peptidase 53 protein-coding chr6-2375 chr6 138100025 138100235 + 13.0 0.000 intron (NM_022121, intron 1 of 2) intron (NM_022121, intron 1 of 2) 7289 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1 p53 apoptosis effector related to PMP22 protein-coding chr8-2163 chr8 69536874 69537084 + 13.0 0.000 intron (NR_156414, intron 2 of 20) MIR|SINE|MIR 44132 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr1-3515 chr1 170742852 170743062 + 13.0 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 78826 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr12-1029 chr12 51217146 51217356 + 13.0 0.000 promoter-TSS (NM_001368008) promoter-TSS (NM_001368008) 54 NM_001368008 5463 Hs.555886 NM_002702 ENSG00000184271 POU6F1 BRN5|MPOU|TCFB1 POU class 6 homeobox 1 protein-coding chr14-1930 chr14 21200121 21200331 + 13.0 0.000 non-coding (NR_038971, exon 2 of 2) non-coding (NR_038971, exon 2 of 2) 5277 NR_038970 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA chr18-1700 chr18 837818 838028 + 13.0 0.000 Intergenic Intergenic -25681 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr19-3887 chr19 35936180 35936390 + 13.0 0.000 promoter-TSS (NM_024509) promoter-TSS (NM_024509) -89 NM_024509 79414 Hs.143792 NM_024509 ENSG00000126243 LRFN3 FIGLER1|SALM4 leucine rich repeat and fibronectin type III domain containing 3 protein-coding chr1-3378 chr1 172460967 172461177 + 13.0 0.000 intron (NM_139240, intron 4 of 6) intron (NM_139240, intron 4 of 6) 8179 NM_001300760 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr22-750 chr22 22882521 22882731 + 13.0 0.000 Intergenic Intergenic -3641 NR_049835 100847006 NR_049835 ENSG00000264824 MIR5571 - microRNA 5571 ncRNA chr5-5469 chr5 139306435 139306645 + 13.0 0.000 intron (NM_001194956, intron 1 of 13) AmnSINE1|SINE|5S-Deu-L2 12790 NM_001194956 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding chr4-3640 chr4 16449672 16449882 + 13.0 0.000 Intergenic Intergenic 223114 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr16-1544 chr16 67942559 67942769 + 13.0 0.000 TTS (NM_001145962) TTS (NM_001145962) 1456 NM_000229 3931 Hs.387239 NM_000229 ENSG00000213398 LCAT - lecithin-cholesterol acyltransferase protein-coding chr12-945 chr12 50103853 50104063 + 13.0 0.000 promoter-TSS (NM_005276) promoter-TSS (NM_005276) -50 NM_005276 2819 Hs.524418 NM_005276 ENSG00000167588 GPD1 GPD-C|GPDH-C|HTGTI glycerol-3-phosphate dehydrogenase 1 protein-coding chr1-3465 chr1 43070947 43071157 + 13.0 0.000 Intergenic MIRb|SINE|MIR -76852 NM_001101376 440585 Hs.657614 NM_001101376 ENSG00000186973 FAM183A - family with sequence similarity 183 member A protein-coding chr1-7713 chr1 26151900 26152110 + 13.0 0.000 Intergenic AluSg|SINE|Alu -7074 NM_024869 79927 Hs.694119 NM_024869 ENSG00000197245 FAM110D GRRP1 family with sequence similarity 110 member D protein-coding chr7-1777 chr7 74098183 74098393 + 13.0 0.000 intron (NM_001204426, intron 3 of 14) MER21C|LTR|ERVL 5071 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr8-765 chr8 13271178 13271388 + 13.0 0.000 intron (NM_001348082, intron 5 of 16) intron (NM_001348082, intron 5 of 16) 5238 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chrX-2520 chrX 96568243 96568453 + 13.0 0.000 Intergenic L2c|LINE|L2 -116315 NM_007309 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr5-1353 chr5 32420657 32420867 + 13.0 0.000 intron (NM_016107, intron 2 of 19) MER20|DNA|hAT-Charlie 23978 NR_144318 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr7-2584 chr7 129949508 129949718 + 13.0 0.000 intron (NM_001202498, intron 1 of 6) intron (NM_001202498, intron 1 of 6) 3347 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr5-2116 chr5 68239684 68239894 + 13.0 0.000 intron (NM_181523, intron 2 of 15) intron (NM_181523, intron 2 of 15) 24033 NM_181523 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr16-2445 chr16 84416537 84416747 + 13.0 0.000 intron (NM_001291454, intron 4 of 23) intron (NM_001291454, intron 4 of 23) 10054 NM_001291454 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr9-1334 chr9 97012913 97013123 + 13.0 0.000 intron (NM_001355229, intron 1 of 4) CpG 587 NM_001355229 84278 Hs.610084 NM_001355228 ENSG00000196312 MFSD14C HIATL2 major facilitator superfamily domain containing 14C protein-coding chr2-8870 chr2 176531807 176532017 + 13.0 0.000 Intergenic Intergenic 69140 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr5-1755 chr5 189996 190206 + 13.0 0.000 TTS (NM_052909) TTS (NM_052909) -1394 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr13-1051 chr13 111510736 111510946 + 13.0 0.000 Intergenic Intergenic -85168 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr15-3284 chr15 77639676 77639886 + 13.0 0.000 intron (NM_001301195, intron 3 of 3) L1ME3Cz|LINE|L1 -1983 NR_045123 253044 Hs.667685 NM_001242772 ENSG00000259666 LINGO1-AS1 - LINGO1 antisense RNA 1 ncRNA chr17-2208 chr17 80679272 80679482 + 13.0 0.000 intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 126255 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr9-5947 chr9 133815385 133815595 + 13.0 0.000 intron (NM_001134398, intron 4 of 29) L1ME2|LINE|L1 -75535 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr4-2978 chr4 116601268 116601478 + 13.0 0.000 Intergenic AluSg|SINE|Alu 301648 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr2-6176 chr2 241728845 241729055 + 13.0 0.000 3' UTR (NM_032329, exon 8 of 8) 3' UTR (NM_032329, exon 8 of 8) -5680 NM_001287249 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr1-3090 chr1 31266633 31266843 + 13.0 0.000 intron (NM_004814, intron 8 of 9) intron (NM_004814, intron 8 of 9) -26851 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr1-4648 chr1 184121747 184121957 + 13.0 0.000 Intergenic Intergenic 70122 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr1-9457 chr1 35398891 35399101 + 13.0 0.000 exon (NM_001350138, exon 23 of 31) exon (NM_001350138, exon 23 of 31) -32919 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr3-2271 chr3 61560907 61561117 + 13.0 0.000 promoter-TSS (NM_002841) promoter-TSS (NM_002841) -559 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr10-2758 chr10 122258472 122258682 + 13.0 0.000 Intergenic Intergenic -12719 NM_001318189 118663 Hs.422466 NM_144587 ENSG00000138152 BTBD16 C10orf87 BTB domain containing 16 protein-coding chr15-2484 chr15 95394992 95395202 + 13.0 0.000 Intergenic Intergenic -37996 NR_027133 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr15-1032 chr15 92915894 92916104 + 13.0 0.000 intron (NM_001042572, intron 2 of 12) MER4A1_|LTR|ERV1 11600 NR_036136 100422995 NR_036136 ENSG00000284324 MIR3175 mir-3175 microRNA 3175 ncRNA chr12-2374 chr12 23729373 23729583 + 13.0 0.000 intron (NM_152989, intron 9 of 17) intron (NM_152989, intron 9 of 17) -144892 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr6-1312 chr6 4355465 4355675 + 13.0 0.000 Intergenic L2c|LINE|L2 -133228 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr13-1214 chr13 66994106 66994316 + 13.0 0.000 intron (NR_046637, intron 1 of 2) LTR50|LTR|ERVL 3325 NR_046637 100874087 Hs.606903 NR_046637 ENSG00000233840 PCDH9-AS4 - PCDH9 antisense RNA 4 ncRNA chr15-1072 chr15 96356765 96356975 + 13.0 0.000 Intergenic Intergenic 23105 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr1-3348 chr1 52955367 52955577 + 13.0 0.000 intron (NM_001193600, intron 4 of 14) intron (NM_001193600, intron 4 of 14) 28196 NM_001193600 6342 Hs.476365 NM_002979 ENSG00000116171 SCP2 NLTP|NSL-TP|SCP-2|SCP-CHI|SCP-X|SCPX sterol carrier protein 2 protein-coding chr4-2596 chr4 122603519 122603729 + 13.0 0.000 Intergenic MER61D|LTR|ERV1 -15359 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr3-6146 chr3 57084165 57084375 + 13.0 0.000 Intergenic Intergenic -5002 NM_001128615 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr2-8698 chr2 152455305 152455515 + 13.0 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 120236 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr22-2083 chr22 19016142 19016352 + 13.0 0.000 intron (NR_110533, intron 5 of 5) intron (NR_110533, intron 5 of 5) -1587 NR_024159 25787 Hs.106311 NR_024159 DGCR9 DGS-A DiGeorge syndrome critical region gene 9 ncRNA chr18-382 chr18 46260080 46260290 + 13.0 0.000 intron (NM_001008239, intron 3 of 3) intron (NM_001008239, intron 3 of 3) -73833 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr7-3809 chr7 93973171 93973381 + 13.0 0.000 intron (NR_133908, intron 5 of 6) intron (NR_133908, intron 5 of 6) 31079 NM_001317739 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr10-821 chr10 96587044 96587254 + 13.0 0.000 promoter-TSS (NM_020123) promoter-TSS (NM_020123) -137 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr8-626 chr8 13471771 13471981 + 13.0 0.000 intron (NM_024767, intron 2 of 4) intron (NM_024767, intron 2 of 4) 42975 NM_182643 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr1-3287 chr1 236039787 236039997 + 13.0 0.000 intron (NM_002508, intron 4 of 19) intron (NM_002508, intron 4 of 19) 25198 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr18-378 chr18 32730850 32731060 + 13.0 0.000 intron (NM_020805, intron 3 of 8) intron (NM_020805, intron 3 of 8) 42068 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr15-1289 chr15 101675195 101675405 + 13.0 0.000 intron (NM_152334, intron 13 of 18) intron (NM_152334, intron 13 of 18) -22909 NM_025141 80213 Hs.288912 NM_025141 ENSG00000184277 TM2D3 BLP2 TM2 domain containing 3 protein-coding chr13-1947 chr13 98276183 98276393 + 13.0 0.000 intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 67764 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr16-2042 chr16 56424492 56424702 + 13.0 0.000 intron (NM_001144, intron 1 of 13) intron (NM_001144, intron 1 of 13) 392 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr5-2309 chr5 56447447 56447657 + 13.0 0.000 Intergenic Intergenic 34217 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr10-729 chr10 5813526 5813736 + 13.0 0.000 promoter-TSS (NM_001115156) promoter-TSS (NM_001115156) -82 NM_001115156 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr3-8287 chr3 55813879 55814089 + 13.0 0.000 intron (NR_132749, intron 13 of 17) intron (NR_132749, intron 13 of 17) 38610 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr6-2203 chr6 39377578 39377788 + 13.0 0.000 intron (NM_001289020, intron 15 of 21) intron (NM_001289020, intron 15 of 21) 53707 NM_001351566 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr9-2602 chr9 5622119 5622329 + 13.0 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -6883 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr3-2308 chr3 121643022 121643232 + 13.0 0.000 intron (NM_001292041, intron 5 of 12) intron (NM_001292041, intron 5 of 12) 17776 NM_001292041 3059 Hs.14601 NM_005335 ENSG00000180353 HCLS1 CTTNL|HS1|lckBP1|p75 hematopoietic cell-specific Lyn substrate 1 protein-coding chr10-3315 chr10 3143494 3143704 + 13.0 0.000 non-coding (NR_144640, exon 23 of 27) non-coding (NR_144640, exon 23 of 27) 1998 NR_038284 100507034 Hs.665365 NR_038284 ENSG00000237399 PITRM1-AS1 - PITRM1 antisense RNA 1 ncRNA chr20-911 chr20 50608857 50609067 + 13.0 0.000 intron (NM_001290268, intron 8 of 21) intron (NM_001290268, intron 8 of 21) 5823 NR_031634 100302146 NR_031634 ENSG00000221091 MIR1302-5 MIRN1302-5|hsa-mir-1302-5 microRNA 1302-5 ncRNA chr3-3394 chr3 58041124 58041334 + 13.0 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 32807 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr11-2856 chr11 9473497 9473707 + 13.0 0.000 intron (NM_001282656, intron 3 of 15) intron (NM_001282656, intron 3 of 15) 12590 NM_003442 7702 Hs.523471 NM_003442 ENSG00000166478 ZNF143 SBF|STAF|pHZ-1 zinc finger protein 143 protein-coding chr1-3614 chr1 36034740 36034950 + 13.0 0.000 intron (NM_177422, intron 11 of 16) intron (NM_177422, intron 11 of 16) -49249 NM_014466 27285 Hs.127111 NM_014466 ENSG00000092850 TEKT2 TEKTB1|TEKTIN-T|h-tektin-t tektin 2 protein-coding chr3-3397 chr3 62603979 62604189 + 13.0 0.000 intron (NM_003716, intron 6 of 29) AluY|SINE|Alu -230534 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr11-2965 chr11 77386326 77386536 + 13.0 0.000 intron (NM_001128620, intron 2 of 15) intron (NM_001128620, intron 2 of 15) -84765 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr3-2193 chr3 9903218 9903428 + 13.0 0.000 intron (NM_153481, intron 1 of 13) intron (NM_153481, intron 1 of 13) 475 NM_153481 132014 Hs.390823 NM_144640 ENSG00000163701 IL17RE - interleukin 17 receptor E protein-coding chr10-2415 chr10 182567 182777 + 13.0 0.000 intron (NM_001370109, intron 2 of 13) intron (NM_001370109, intron 2 of 13) 2678 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr9-2327 chr9 18071635 18071845 + 13.0 0.000 Intergenic Intergenic -402413 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr6-5306 chr6 142942905 142943115 + 13.0 0.000 intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 2166 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr17-1404 chr17 57463271 57463481 + 13.0 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) 60221 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr12-3167 chr12 49382602 49382812 + 13.0 0.000 intron (NM_023071, intron 2 of 13) AluSq2|SINE|Alu -6467 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr11-6945 chr11 111939994 111940204 + 13.0 0.000 intron (NM_001037954, intron 1 of 19) intron (NM_001037954, intron 1 of 19) 2756 NM_001037954 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr5-5344 chr5 130985379 130985589 + 13.0 0.000 Intergenic Intergenic 179772 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr7-2667 chr7 6206305 6206515 + 13.0 0.000 intron (NM_001367581, intron 1 of 13) L1MB7|LINE|L1 -34273 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr14-1146 chr14 26841938 26842148 + 13.0 0.000 Intergenic Intergenic -19923 NR_110033 101927062 NR_110033 ENSG00000257845 LINC02294 - long intergenic non-protein coding RNA 2294 ncRNA chr2-3244 chr2 237227754 237227964 + 13.0 0.000 Intergenic LTR16E2|LTR|ERVL 141970 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr15-2928 chr15 46155398 46155608 + 13.0 0.000 Intergenic Intergenic 450308 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr15-1908 chr15 78221468 78221678 + 13.0 0.000 intron (NM_015162, intron 1 of 13) LTR5B|LTR|ERVK 12992 NM_015162 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr17-1780 chr17 50884233 50884443 + 13.0 0.000 Intergenic L2b|LINE|L2 -16360 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr14-919 chr14 92160728 92160938 + 13.0 0.000 intron (NM_001322272, intron 14 of 15) intron (NM_001322272, intron 14 of 15) 38864 NM_001322270 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr14-2058 chr14 66170965 66171175 + 13.0 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -315301 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr7-4947 chr7 138816834 138817044 + 13.0 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -18743 NM_020632 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr12-1143 chr12 118189847 118190057 + 13.0 0.000 5' UTR (NM_001346494, exon 1 of 8) 5' UTR (NM_001346494, exon 1 of 8) 583 NM_001346497 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr1-2300 chr1 27603989 27604199 + 13.0 0.000 promoter-TSS (NM_001029882) promoter-TSS (NM_001029882) -600 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr12-2580 chr12 116074682 116074892 + 13.0 0.000 intron (NM_015335, intron 4 of 30) intron (NM_015335, intron 4 of 30) 73867 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr8-3987 chr8 53201872 53202082 + 13.0 0.000 Intergenic Intergenic 49660 NM_000912 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr17-1595 chr17 63439833 63440043 + 13.0 0.000 intron (NM_001915, intron 1 of 5) intron (NM_001915, intron 1 of 5) 329 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr9-3341 chr9 101418691 101418901 + 13.0 0.000 Intergenic Intergenic 16978 NM_000035 229 Hs.530274 NM_000035 ENSG00000136872 ALDOB ALDB|ALDO2 aldolase, fructose-bisphosphate B protein-coding chr7-1634 chr7 28988742 28988952 + 13.0 0.000 intron (NR_038965, intron 1 of 4) intron (NR_038965, intron 1 of 4) 8880 NR_038965 100506497 Hs.586328 NR_038965 ENSG00000272568 LOC100506497 - uncharacterized LOC100506497 ncRNA chr4-2915 chr4 87375823 87376033 + 13.0 0.000 intron (NM_016245, intron 2 of 6) MIRb|SINE|MIR 15260 NM_016245 51170 Hs.594923 NM_016245 ENSG00000198189 HSD17B11 17-BETA-HSD11|17-BETA-HSDXI|17BHSD11|DHRS8|PAN1B|RETSDR2|SDR16C2 hydroxysteroid 17-beta dehydrogenase 11 protein-coding chr1-1909 chr1 208086746 208086956 + 13.0 0.000 intron (NM_025179, intron 9 of 31) intron (NM_025179, intron 9 of 31) 157533 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr6-5043 chr6 112145714 112145924 + 13.0 0.000 intron (NM_001105206, intron 18 of 38) intron (NM_001105206, intron 18 of 38) 58228 NM_001033564 619208 Hs.591340 NM_001033564 ENSG00000203778 FAM229B C6orf225 family with sequence similarity 229 member B protein-coding chr17-2028 chr17 18008912 18009122 + 13.0 0.000 intron (NM_031294, intron 12 of 13) intron (NM_031294, intron 12 of 13) 30151 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr15-2103 chr15 67183569 67183779 + 13.0 0.000 intron (NM_001145103, intron 6 of 8) intron (NM_001145103, intron 6 of 8) 17519 NM_001145104 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr19-1081 chr19 7599641 7599851 + 13.0 0.000 intron (NM_020902, intron 1 of 16) (CCAC)n|Simple_repeat|Simple_repeat 3883 NM_001080429 57662 Hs.17686 NM_020902 ENSG00000076826 CAMSAP3 KIAA1543|NEZHA|PPP1R80 calmodulin regulated spectrin associated protein family member 3 protein-coding chr16-2957 chr16 8821856 8822066 + 13.0 0.000 intron (NM_000303, intron 7 of 7) LTR8|LTR|ERV1 24122 NM_000303 5373 Hs.625732 NM_000303 ENSG00000140650 PMM2 CDG1|CDG1a|CDGS|PMI|PMI1|PMM 2 phosphomannomutase 2 protein-coding chr11-2300 chr11 60697222 60697432 + 13.0 0.000 Intergenic LTR16C|LTR|ERVL -2285 NM_031457 83661 Hs.150878 NM_031457 ENSG00000166959 MS4A8 4SPAN4|CD20L5|MS4A4|MS4A8B membrane spanning 4-domains A8 protein-coding chr2-4540 chr2 44949913 44950123 + 13.0 0.000 Intergenic Intergenic -8140 NR_103786 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 SIX3OS SIX3 antisense RNA 1 ncRNA chr4-1656 chr4 116003204 116003414 + 13.0 0.000 Intergenic MSTB|LTR|ERVL-MaLR -296416 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr5-1599 chr5 34037557 34037767 + 13.0 0.000 intron (NR_146599, intron 7 of 11) intron (NR_146599, intron 7 of 11) 5551 NM_030945 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr15-940 chr15 86371888 86372098 + 13.0 0.000 intron (NM_152336, intron 17 of 24) intron (NM_152336, intron 17 of 24) -55025 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr5-3431 chr5 152462108 152462318 + 13.0 0.000 Intergenic LTR16B2|LTR|ERVL -56934 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr1-4759 chr1 9207741 9207951 + 13.0 0.000 Intergenic Intergenic -25508 NR_132742 106614088 Hs.551837 NR_132742 ENSG00000228526 MIR34AHG - MIR34A host gene ncRNA chr3-2062 chr3 168801936 168802146 + 13.0 0.000 intron (NR_021485, intron 8 of 15) intron (NR_021485, intron 8 of 15) -99904 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr7-2941 chr7 145435500 145435710 + 13.0 0.000 Intergenic Intergenic -599552 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr15-2875 chr15 41908397 41908607 + 13.0 0.000 intron (NM_139265, intron 5 of 5) intron (NM_139265, intron 5 of 5) -12915 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr8-4225 chr8 86722871 86723081 + 13.0 0.000 intron (NM_019098, intron 3 of 17) MLT2B4|LTR|ERVL 20699 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding chr3-3958 chr3 51894789 51894999 + 13.0 0.000 TTS (NM_152397) TTS (NM_152397) 8459 NM_152397 132141 Hs.671210 NM_152397 ENSG00000173389 IQCF1 - IQ motif containing F1 protein-coding chr16-4055 chr16 1512937 1513147 + 13.0 0.000 intron (NM_014714, intron 30 of 30) L3|LINE|CR1 -15636 NM_001256541 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr6-858 chr6 33513436 33513646 + 13.0 0.000 Intergenic Intergenic 58965 NM_152735 221504 Hs.591805 NM_152735 ENSG00000213588 ZBTB9 ZNF919 zinc finger and BTB domain containing 9 protein-coding chr15-1945 chr15 101790708 101790918 + 13.0 0.000 Intergenic LTR82B|LTR|ERVL -14907 NM_001005326 390648 Hs.553399 NM_001005326 ENSG00000184140 OR4F6 OR15-15|OR4F12 olfactory receptor family 4 subfamily F member 6 protein-coding chrX-1974 chrX 10845207 10845417 + 13.0 0.000 Intergenic Intergenic -11629 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr22-1132 chr22 41725580 41725790 + 13.0 0.000 intron (NM_152513, intron 7 of 30) L2b|LINE|L2 26182 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr10-1898 chr10 119233895 119234105 + 13.0 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 26429 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr2-2878 chr2 196400375 196400585 + 13.0 0.000 intron (NM_020760, intron 2 of 28) intron (NM_020760, intron 2 of 28) -38303 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr3-2601 chr3 157145618 157145828 + 13.0 0.000 TTS (NM_001308185) TTS (NM_001308185) 15037 NM_020307 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr3-795 chr3 157088955 157089165 + 13.0 0.000 promoter-TSS (NR_034008) promoter-TSS (NR_034008) -821 NR_034008 100498859 Hs.633655 NR_034008 ENSG00000241135 LINC00881 - long intergenic non-protein coding RNA 881 ncRNA chr13-1648 chr13 65165519 65165729 + 13.0 0.000 Intergenic Intergenic -700423 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr22-2182 chr22 45498073 45498283 + 13.0 0.000 Intergenic L1ME4c|LINE|L1 -4705 NM_006486 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr16-2508 chr16 89764538 89764748 + 13.0 0.000 intron (NM_000135, intron 28 of 42) intron (NM_000135, intron 28 of 42) 43106 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr6-3500 chr6 21740822 21741032 + 13.0 0.000 intron (NR_015410, intron 2 of 11) intron (NR_015410, intron 2 of 11) 74514 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr19-1828 chr19 5079871 5080081 + 13.0 0.000 intron (NM_001370094, intron 8 of 10) intron (NM_001370094, intron 8 of 10) 110863 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr1-7767 chr1 39688658 39688868 + 13.0 0.000 intron (NM_016257, intron 1 of 3) intron (NM_016257, intron 1 of 3) 2670 NM_016257 51440 Hs.743975 NM_016257 ENSG00000116983 HPCAL4 HLP4 hippocalcin like 4 protein-coding chr16-1888 chr16 85626640 85626850 + 13.0 0.000 intron (NM_001278184, intron 1 of 14) intron (NM_001278184, intron 1 of 14) 13423 NM_001278184 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr1-9960 chr1 79568473 79568683 + 13.0 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -561848 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr17-3042 chr17 79662923 79663133 + 13.0 0.000 Intergenic Intergenic 44221 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr17-4213 chr17 34823387 34823597 + 13.0 0.000 Intergenic Intergenic 137968 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr4-1048 chr4 57043905 57044115 + 13.0 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) 65114 NM_000938 5431 Hs.602757 NM_000938 ENSG00000047315 POLR2B POL2RB|RPB2|hRPB140 RNA polymerase II subunit B protein-coding chr5-6880 chr5 127403878 127404088 + 13.0 0.000 intron (NM_001308121, intron 8 of 13) L1MA1|LINE|L1 113187 NM_001256545 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr1-6897 chr1 144412193 144412403 + 13.0 0.000 promoter-TSS (NR_104076) promoter-TSS (NR_104076) -278 NR_104076 101954267 NR_104076 ENSG00000207205 RNVU1-15 RNU1-121|RNU1-66|RNVU1-16|vU1.15|vU1.16 RNA, variant U1 small nuclear 15 snRNA chr18-2003 chr18 41998028 41998238 + 13.0 0.000 intron (NM_001308020, intron 8 of 23) intron (NM_001308020, intron 8 of 23) 42899 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr4-2847 chr4 54852899 54853109 + 13.0 0.000 Intergenic Intergenic 195076 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr1-7293 chr1 241507611 241507821 + 13.0 0.000 intron (NM_000143, intron 5 of 9) intron (NM_000143, intron 5 of 9) 12069 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1 fumarate hydratase protein-coding chr1-3909 chr1 75615524 75615734 + 13.0 0.000 intron (NM_001320283, intron 1 of 21) intron (NM_001320283, intron 1 of 21) 534 NM_001320283 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr5-3032 chr5 16028668 16028878 + 13.0 0.000 Intergenic Intergenic 93591 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr16-912 chr16 67278020 67278230 + 13.0 0.000 promoter-TSS (NM_001129727) promoter-TSS (NM_001129727) -37 NM_001129727 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding chr4-3397 chr4 40364305 40364515 + 13.0 0.000 Intergenic Intergenic 29077 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chr10-1014 chr10 14588548 14588758 + 13.0 0.000 intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) 15748 NM_001282696 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr10-4972 chr10 29768562 29768772 + 13.0 0.000 Intergenic MER65A|LTR|ERV1 -31731 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr1-1705 chr1 2419413 2419623 + 13.0 0.000 Intergenic Intergenic -6947 NM_153818 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr4-2432 chr4 144176588 144176798 + 13.0 0.000 Intergenic Intergenic -35975 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr8-4101 chr8 69525489 69525699 + 13.0 0.000 intron (NR_156414, intron 2 of 20) intron (NR_156414, intron 2 of 20) 32747 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr5-4077 chr5 60496089 60496299 + 13.0 0.000 promoter-TSS (NM_001364599) promoter-TSS (NM_001364599) 92 NM_001364599 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr4-1663 chr4 127587015 127587225 + 13.0 0.000 Intergenic L1PA15-16|LINE|L1 -45837 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr17-2933 chr17 50482596 50482806 + 13.0 0.000 exon (NM_018346, exon 5 of 9) exon (NM_018346, exon 5 of 9) 3841 NM_018346 55316 Hs.8033 NM_018346 ENSG00000136444 RSAD1 HemW radical S-adenosyl methionine domain containing 1 protein-coding chr5-1226 chr5 142977645 142977855 + 13.0 0.000 intron (NR_146198, intron 11 of 22) intron (NR_146198, intron 11 of 22) -108840 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr7-1710 chr7 1590613 1590823 + 13.0 0.000 Intergenic Intergenic 20645 NR_027328 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr13-2379 chr13 40987752 40987962 + 13.0 0.000 intron (NM_001370329, intron 1 of 9) intron (NM_001370329, intron 1 of 9) -4958 NM_001370331 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr6-2908 chr6 14732968 14733178 + 13.0 0.000 Intergenic Intergenic -447619 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr9-1763 chr9 132986835 132987045 + 13.0 0.000 intron (NM_001135031, intron 2 of 5) intron (NM_001135031, intron 2 of 5) 8246 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr9-2340 chr9 42340219 42340429 + 13.0 0.000 Intergenic Intergenic 141462 NR_126166 100996582 NR_126166 FAM74A7 - family with sequence similarity 74 member A7 ncRNA chr2-4985 chr2 205636441 205636651 + 13.0 0.000 Intergenic Intergenic -45954 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr8-2108 chr8 141279270 141279480 + 13.0 0.000 Intergenic Intergenic -24746 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr16-2096 chr16 89502149 89502359 + 13.0 0.000 Intergenic L2|LINE|L2 -6134 NM_001363850 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7 matrix AAA peptidase subunit, paraplegin protein-coding chr12-2286 chr12 111674293 111674503 + 13.0 0.000 intron (NM_006768, intron 4 of 11) AluSx|SINE|Alu 11558 NM_006768 8315 Hs.530940 NM_006768 ENSG00000089234 BRAP BRAP2|IMP|RNF52 BRCA1 associated protein protein-coding chr22-788 chr22 46437963 46438173 + 13.0 0.000 intron (NM_014246, intron 3 of 34) intron (NM_014246, intron 3 of 34) 99552 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr12-1854 chr12 48032801 48033011 + 13.0 0.000 Intergenic Intergenic -28430 NM_033150 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr10-2548 chr10 62903851 62904061 + 13.0 0.000 Intergenic MIRc|SINE|MIR -84789 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chr12-1696 chr12 123984014 123984224 + 13.0 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 10904 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr15-1271 chr15 89493615 89493825 + 13.0 0.000 intron (NM_001321041, intron 1 of 10) MIRb|SINE|MIR 2863 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr8-1682 chr8 50001457 50001667 + 13.0 0.000 intron (NR_135798, intron 1 of 15) intron (NR_135798, intron 1 of 15) 90155 NR_135796 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr7-1759 chr7 48182992 48183202 + 13.0 0.000 intron (NM_152701, intron 1 of 61) intron (NM_152701, intron 1 of 61) 11639 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr12-3016 chr12 128532707 128532917 + 13.0 0.000 intron (NM_001136103, intron 2 of 8) intron (NM_001136103, intron 2 of 8) 238720 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr4-1425 chr4 53117008 53117218 + 13.0 0.000 intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 248948 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr5-5116 chr5 101580881 101581091 + 13.0 0.000 Intergenic Intergenic -677704 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr22-1971 chr22 50448339 50448549 + 13.0 0.000 exon (NM_002972, exon 38 of 41) exon (NM_002972, exon 38 of 41) 26591 NM_002972 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chrX-3690 chrX 109018227 109018437 + 13.0 0.000 Intergenic Intergenic 281792 NR_110652 101928358 Hs.722300 NR_110652 ENSG00000237863 LOC101928358 - uncharacterized LOC101928358 ncRNA chr21-340 chr21 32197464 32197674 + 13.0 0.000 Intergenic Intergenic 81480 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chrX-734 chrX 3175660 3175870 + 13.0 0.000 Intergenic AluJr|SINE|Alu -96055 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 LINC01546 CXorf28 long intergenic non-protein coding RNA 1546 ncRNA chr2-2271 chr2 20093824 20094034 + 13.0 0.000 Intergenic Intergenic -42301 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr17-1931 chr17 78680993 78681203 + 13.0 0.000 intron (NM_001365041, intron 10 of 12) intron (NM_001365041, intron 10 of 12) 35934 NM_001292019 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr1-4110 chr1 240813804 240814014 + 13.0 0.000 intron (NM_001350116, intron 12 of 16) intron (NM_001350116, intron 12 of 16) -201754 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr3-1977 chr3 130658634 130658844 + 13.0 0.000 exon (NM_001102608, exon 33 of 36) exon (NM_001102608, exon 33 of 36) 88090 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr2-5553 chr2 165332223 165332433 + 13.0 0.000 intron (NM_001040143, intron 15 of 27) intron (NM_001040143, intron 15 of 27) 38273 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr2-8022 chr2 69885700 69885910 + 13.0 0.000 Intergenic MIRb|SINE|MIR -8151 NM_006857 11017 Hs.54649 NM_006857 ENSG00000124380 SNRNP27 27K|RY1 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 protein-coding chr2-3895 chr2 44686590 44686800 + 13.0 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 252193 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr10-1294 chr10 35735551 35735761 + 13.0 0.000 Intergenic L1M4a2|LINE|L1 -42646 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chrX-815 chrX 81261562 81261772 + 13.0 0.000 intron (NM_003022, intron 1 of 3) intron (NM_003022, intron 1 of 3) 59565 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr19-2245 chr19 48660891 48661101 + 13.0 0.000 TTS (NM_145807) TTS (NM_145807) 12085 NM_145807 126147 Hs.326217 NM_145807 ENSG00000142233 NTN5 - netrin 5 protein-coding chr20-744 chr20 14776117 14776327 + 13.0 0.000 intron (NM_001351663, intron 5 of 17) intron (NM_001351663, intron 5 of 17) 153296 NR_072988 100379174 Hs.407533 NR_037841 ENSG00000235914 MACROD2-AS1 BA318C17.1|NCRNA00186 MACROD2 antisense RNA 1 ncRNA chr8-1094 chr8 23539052 23539262 + 13.0 0.000 intron (NM_001317814, intron 2 of 4) intron (NM_001317814, intron 2 of 4) 10201 NM_016612 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr7-2522 chr7 46317400 46317610 + 13.0 0.000 Intergenic Intergenic 379617 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr1-6148 chr1 173295421 173295631 + 13.0 0.000 intron (NR_037845, intron 2 of 2) HSMAR2|DNA|TcMar-Mariner -88195 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr12-3267 chr12 67964508 67964718 + 13.0 0.000 intron (NR_120456, intron 2 of 2) intron (NR_120456, intron 2 of 2) -24832 NR_104124 100885789 Hs.439832 NR_104124 ENSG00000255733 IFNG-AS1 GS1-410F4.2|NEST|Tmevpg1 IFNG antisense RNA 1 ncRNA chr19-1637 chr19 2416783 2416993 + 13.0 0.000 intron (NM_182973, intron 11 of 16) intron (NM_182973, intron 11 of 16) 10698 NM_012458 26517 Hs.75056 NM_012458 ENSG00000099800 TIMM13 TIM13|TIM13B|TIMM13A|TIMM13B|ppv1 translocase of inner mitochondrial membrane 13 protein-coding chr9-2367 chr9 114894952 114895162 + 13.0 0.000 intron (NM_001252290, intron 4 of 4) intron (NM_001252290, intron 4 of 4) 35538 NM_001252290 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr3-3761 chr3 8632813 8633023 + 13.0 0.000 intron (NR_046358, intron 5 of 12) MIRb|SINE|MIR 11880 NR_046358 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr1-1560 chr1 6602441 6602651 + 13.0 0.000 exon (NM_014851, exon 1 of 4) exon (NM_014851, exon 1 of 4) 323 NM_014851 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr15-2748 chr15 24690915 24691125 + 13.0 0.000 Intergenic LTR7|LTR|ERV1 15626 NM_018958 23742 Hs.649663 NM_018958 ENSG00000185823 NPAP1 C15orf2 nuclear pore associated protein 1 protein-coding chr12-1703 chr12 132834730 132834940 + 13.0 0.000 Intergenic AluY|SINE|Alu -5966 NM_001172557 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr18-2186 chr18 60198139 60198349 + 13.0 0.000 Intergenic Intergenic 174531 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr16-2352 chr16 53154212 53154422 + 13.0 0.000 intron (NM_001352127, intron 1 of 38) intron (NM_001352127, intron 1 of 38) -1609 NM_001308319 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr8-2098 chr8 134988614 134988824 + 13.0 0.000 Intergenic Intergenic 138784 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr18-640 chr18 30494195 30494405 + 13.0 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 195390 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr6-2560 chr6 40779445 40779655 + 13.0 0.000 Intergenic Intergenic -192186 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr9-2765 chr9 107369073 107369283 + 13.0 0.000 Intergenic MER21C|LTR|ERVL 84409 NM_001244713 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr11-1940 chr11 96017677 96017887 + 13.0 0.000 intron (NM_032427, intron 2 of 4) L2a|LINE|L2 -93575 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr8-1347 chr8 96437655 96437865 + 13.0 0.000 Intergenic Intergenic -50322 NR_125828 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr3-3662 chr3 132134694 132134904 + 13.0 0.000 Intergenic Intergenic -95193 NM_153429 131034 Hs.199877 NM_130808 ENSG00000196353 CPNE4 COPN4|CPN4 copine 4 protein-coding chr7-2006 chr7 33155867 33156077 + 13.0 0.000 intron (NM_198428, intron 4 of 22) intron (NM_198428, intron 4 of 22) 26408 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr9-5198 chr9 72504354 72504564 + 13.0 0.000 Intergenic Intergenic -17342 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chrX-761 chrX 22950335 22950545 + 13.0 0.000 intron (NR_073010, intron 3 of 11) MER63A|DNA|hAT-Blackjack -49520 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr18-392 chr18 2536611 2536821 + 13.0 0.000 TTS (NM_001308401) TTS (NM_001308401) 34789 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr15-614 chr15 90158049 90158259 + 13.0 0.000 Intergenic Intergenic -26766 NM_001324029 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr1-4101 chr1 230825101 230825311 + 13.0 0.000 Intergenic Intergenic 30801 NM_001136495 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr20-759 chr20 34922768 34922978 + 13.0 0.000 intron (NM_001076552, intron 14 of 18) intron (NM_001076552, intron 14 of 18) 32762 NM_001322495 2937 Hs.82327 NM_000178 ENSG00000100983 GSS GSHS|HEL-S-64p|HEL-S-88n glutathione synthetase protein-coding chr8-4081 chr8 67423830 67424040 + 13.0 0.000 intron (NM_020361, intron 10 of 10) MER1A|DNA|hAT-Charlie 80101 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chrX-1785 chrX 78853079 78853289 + 13.0 0.000 Intergenic L2c|LINE|L2 48065 NR_036258 100422932 NR_036258 ENSG00000283622 MIR4328 - microRNA 4328 ncRNA chr2-4643 chr2 181790729 181790939 + 13.0 0.000 Intergenic Intergenic -100896 NM_001287505 6744 Hs.196983 NM_006751 ENSG00000138434 ITPRID2 CS-1|CS1|KRAP|SPAG13|SSFA2 ITPR interacting domain containing 2 protein-coding chr1-6612 chr1 40297215 40297425 + 13.0 0.000 Intergenic L2a|LINE|L2 19966 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr7-1498 chr7 140673022 140673232 + 13.0 0.000 5' UTR (NM_052853, exon 1 of 8) 5' UTR (NM_052853, exon 1 of 8) 182 NM_052853 90956 Hs.744886 NM_052853 ENSG00000133597 ADCK2 AARF aarF domain containing kinase 2 protein-coding chr2-4678 chr2 211928973 211929183 + 13.0 0.000 intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 497282 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr15-1829 chr15 41905212 41905422 + 13.0 0.000 intron (NM_139265, intron 5 of 5) intron (NM_139265, intron 5 of 5) -11264 NM_016642 51332 Hs.709819 NM_016642 ENSG00000137877 SPTBN5 BSPECV|HUBSPECV|HUSPECV spectrin beta, non-erythrocytic 5 protein-coding chr17-2369 chr17 74858726 74858936 + 13.0 0.000 intron (NM_001278553, intron 1 of 11) L2c|LINE|L2 1053 NR_103735 2905 Hs.436980 NM_000835 ENSG00000161509 GRIN2C GluN2C|NMDAR2C|NR2C glutamate ionotropic receptor NMDA type subunit 2C protein-coding chr17-2101 chr17 82654356 82654566 + 13.0 0.000 TTS (NM_006822) TTS (NM_006822) -6017 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr6-4803 chr6 79079909 79080119 + 13.0 0.000 Intergenic Intergenic -1760 NM_017934 55023 Hs.511817 NM_017934 ENSG00000146247 PHIP BRWD2|DCAF14|DIDOD|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding chr5-4011 chr5 31123775 31123985 + 13.0 0.000 Intergenic Intergenic -69806 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr2-1357 chr2 240061145 240061355 + 13.0 0.000 Intergenic Intergenic -15178 NM_173351 150681 Hs.626616 NM_173351 ENSG00000178586 OR6B3 OR6B3P|OR6B3Q olfactory receptor family 6 subfamily B member 3 protein-coding chr12-4881 chr12 63967529 63967739 + 13.0 0.000 intron (NM_001346201, intron 1 of 21) intron (NM_001346201, intron 1 of 21) 122934 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr11-3924 chr11 123192468 123192678 + 13.0 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 2675 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr9-2529 chr9 123362803 123363013 + 13.0 0.000 exon (NM_173689, exon 2 of 13) exon (NM_173689, exon 2 of 13) -5871 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr12-2119 chr12 69501471 69501681 + 13.0 0.000 intron (NM_001278354, intron 2 of 9) intron (NM_001278354, intron 2 of 9) -13864 NR_145803 109623461 NR_145803 SNORA113 - small nucleolar RNA, H/ACA box 113 snoRNA chr1-4337 chr1 64042501 64042711 + 13.0 0.000 intron (NM_005012, intron 2 of 8) intron (NM_005012, intron 2 of 8) 69599 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr5-3731 chr5 32373720 32373930 + 13.0 0.000 intron (NM_016107, intron 17 of 19) intron (NM_016107, intron 17 of 19) 20650 NR_030305 693164 NR_030305 ENSG00000207956 MIR579 MIRN579|hsa-mir-579 microRNA 579 ncRNA chr3-1155 chr3 78804715 78804925 + 13.0 0.000 intron (NM_002941, intron 4 of 30) intron (NM_002941, intron 4 of 30) 214639 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr6-2115 chr6 1363697 1363907 + 13.0 0.000 Intergenic Intergenic -25774 NM_001452 2295 Hs.484423 NM_001452 ENSG00000137273 FOXF2 FKHL6|FREAC-2|FREAC2 forkhead box F2 protein-coding chr10-2965 chr10 64991317 64991527 + 13.0 0.000 Intergenic Intergenic -66904 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA chr6-4499 chr6 37201892 37202102 + 13.0 0.000 Intergenic LTR67B|LTR|ERVL 31845 NM_001243186 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr13-720 chr13 75050810 75051020 + 13.0 0.000 Intergenic Intergenic 189466 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr5-1442 chr5 32852435 32852645 + 13.0 0.000 Intergenic Intergenic -94903 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr1-8734 chr1 237393365 237393575 + 13.0 0.000 intron (NM_001035, intron 10 of 104) intron (NM_001035, intron 10 of 104) -77649 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr3-2154 chr3 131211288 131211498 + 13.0 0.000 intron (NM_001353043, intron 14 of 17) L1PA6|LINE|L1 -150452 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr7-3866 chr7 104307947 104308157 + 13.0 0.000 Intergenic Intergenic -20604 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr3-6205 chr3 61953720 61953930 + 13.0 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 365122 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr6-1271 chr6 64012332 64012542 + 13.0 0.000 intron (NM_001292009, intron 33 of 43) intron (NM_001292009, intron 33 of 43) 205601 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr6-875 chr6 71468829 71469039 + 13.0 0.000 Intergenic Intergenic 47907 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr7-3315 chr7 55163339 55163549 + 13.0 0.000 intron (NM_201284, intron 13 of 15) intron (NM_201284, intron 13 of 15) 25505 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr4-2119 chr4 60724567 60724777 + 13.0 0.000 Intergenic Intergenic -197947 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr18-539 chr18 8948800 8949010 + 13.0 0.000 Intergenic Intergenic -153794 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr16-977 chr16 71723636 71723846 + 13.0 0.000 intron (NM_015020, intron 1 of 18) CpG 960 NM_015020 23035 Hs.709458 NM_015020 ENSG00000040199 PHLPP2 PHLPPL|PPM3B PH domain and leucine rich repeat protein phosphatase 2 protein-coding chr4-1686 chr4 153447613 153447823 + 13.0 0.000 Intergenic Intergenic -18628 NM_015196 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr15-2047 chr15 55897602 55897812 + 13.0 0.000 intron (NM_001329212, intron 5 of 28) intron (NM_001329212, intron 5 of 28) 19424 NR_104302 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr19-2327 chr19 35965941 35966151 + 13.0 0.000 Intergenic Intergenic 18931 NR_136525 105372383 Hs.641592 NR_136525 LOC105372383 - uncharacterized LOC105372383 ncRNA chr1-9938 chr1 76891880 76892090 + 13.0 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 24505 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr10-2388 chr10 110069480 110069690 + 13.0 0.000 intron (NM_001121, intron 1 of 13) intron (NM_001121, intron 1 of 13) -61204 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr8-2361 chr8 29737916 29738126 + 13.0 0.000 intron (NR_026765, intron 1 of 3) intron (NR_026765, intron 1 of 3) 10088 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA chr10-1428 chr10 16441321 16441531 + 13.0 0.000 intron (NM_001261837, intron 2 of 4) intron (NM_001261837, intron 2 of 4) 4483 NM_030664 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr2-2859 chr2 164028867 164029077 + 13.0 0.000 Intergenic Intergenic -292964 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr7-1527 chr7 75846770 75846980 + 13.0 0.000 Intergenic AluSx|SINE|Alu -23503 NM_001371193 chr11-7130 chr11 125551719 125551929 + 13.0 0.000 Intergenic LTR8|LTR|ERV1 -17653 NM_001290135 9538 Hs.643514 NM_004879 ENSG00000149547 EI24 EPG4|PIG8|TP53I8 EI24 autophagy associated transmembrane protein protein-coding chr17-1631 chr17 2594567 2594777 + 13.0 0.000 intron (NM_000430, intron 1 of 10) CpG 1018 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr14-3730 chr14 31969402 31969612 + 13.0 0.000 Intergenic Intergenic 24654 NR_146544 105370439 NR_146544 ENSG00000258474 LINC02313 - long intergenic non-protein coding RNA 2313 ncRNA chr5-2811 chr5 14913451 14913661 + 13.0 0.000 Intergenic Intergenic -41778 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr10-3729 chr10 115751484 115751694 + 13.0 0.000 intron (NM_207303, intron 27 of 28) L1MC5a|LINE|L1 443200 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr3-4330 chr3 177337277 177337487 + 13.0 0.000 Intergenic Intergenic 42940 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr2-3856 chr2 36425987 36426197 + 13.0 0.000 intron (NM_016441, intron 2 of 16) Tigger12|DNA|TcMar-Tigger 70314 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr1-2207 chr1 93078982 93079192 + 13.0 0.000 promoter-TSS (NM_001164391) promoter-TSS (NM_001164391) -148 NM_001164393 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr1-4992 chr1 62230047 62230257 + 13.0 0.000 Intergenic Intergenic 35303 NM_019079 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr20-732 chr20 2841198 2841408 + 13.0 0.000 promoter-TSS (NM_022760) promoter-TSS (NM_022760) -152 NM_001271168 64773 Hs.29341 NM_022760 ENSG00000132635 PCED1A C20orf81|FAM113A|bA12M19.1 PC-esterase domain containing 1A protein-coding chr1-3034 chr1 1754411 1754621 + 13.0 0.000 intron (NM_001353641, intron 8 of 11) CpG-139 4126 NM_001198995 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr3-3409 chr3 81742542 81742752 + 13.0 0.000 intron (NM_000158, intron 1 of 15) intron (NM_000158, intron 1 of 15) 18998 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr1-3615 chr1 36133695 36133905 + 13.0 0.000 Intergenic Intergenic -8578 NM_001294347 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr12-5357 chr12 117850032 117850242 + 13.0 0.000 intron (NM_173598, intron 3 of 19) intron (NM_173598, intron 3 of 19) 118853 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr2-4226 chr2 217836369 217836579 + 13.0 0.000 intron (NM_001308023, intron 16 of 29) intron (NM_001308023, intron 16 of 29) -2741 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr12-1133 chr12 77488225 77488435 + 13.0 0.000 Intergenic Intergenic -342564 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr10-1349 chr10 112296291 112296501 + 13.0 0.000 intron (NM_058222, intron 7 of 10) intron (NM_058222, intron 7 of 10) -3216 NR_106771 102466189 NR_106771 ENSG00000276857 MIR6715A hsa-mir-6715a microRNA 6715a ncRNA chr1-9411 chr1 31964237 31964447 + 13.0 0.000 Intergenic Intergenic -25974 NM_080391 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr2-4423 chr2 134233706 134233916 + 13.0 0.000 intron (NM_001371457, intron 1 of 16) MIRb|SINE|MIR -20261 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr2-1450 chr2 241482234 241482444 + 13.0 0.000 intron (NM_014808, intron 19 of 26) LTR50|LTR|ERVL 4434 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr13-1284 chr13 24869260 24869470 + 13.0 0.000 intron (NM_031277, intron 31 of 35) intron (NM_031277, intron 31 of 35) 53496 NR_047594 55835 Hs.513379 NM_018451 ENSG00000151849 CENPJ BM032|CENP-J|CPAP|LAP|LIP1|MCPH6|SASS4|SCKL4|Sas-4 centromere protein J protein-coding chr3-4329 chr3 177222057 177222267 + 13.0 0.000 Intergenic Plat_L3|LINE|CR1 -24680 NM_024665 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr2-2514 chr2 172325993 172326203 + 13.0 0.000 Intergenic Intergenic -101238 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr5-1212 chr5 120465716 120465926 + 13.0 0.000 intron (NM_001308087, intron 1 of 1) intron (NM_001308087, intron 1 of 1) 190 NM_001308087 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr5-1558 chr5 89878225 89878435 + 13.0 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 138390 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr9-3697 chr9 105966901 105967111 + 13.0 0.000 Intergenic Intergenic 272465 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chrX-854 chrX 133048819 133049029 + 13.0 0.000 Intergenic Intergenic -20652 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding chr5-3077 chr5 36087152 36087362 + 13.0 0.000 Intergenic L2a|LINE|L2 -20375 NR_031764 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr17-703 chr17 17681356 17681566 + 13.0 0.000 promoter-TSS (NM_030665) promoter-TSS (NM_030665) 3 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr18-751 chr18 70422069 70422279 + 13.0 0.000 Intergenic Intergenic -37583 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LINC01910 - long intergenic non-protein coding RNA 1910 ncRNA chr12-1904 chr12 75854980 75855190 + 13.0 0.000 Intergenic Intergenic 176691 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr7-6204 chr7 130752634 130752844 + 13.0 0.000 Intergenic Intergenic -18706 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr4-1299 chr4 107990333 107990543 + 13.0 0.000 intron (NM_005327, intron 1 of 7) intron (NM_005327, intron 1 of 7) 549 NM_005327 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding chr14-1046 chr14 30746351 30746561 + 13.0 0.000 Intergenic Charlie13a|DNA|hAT-Charlie 124137 NM_001257376 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chrX-329 chrX 55000016 55000226 + 13.0 0.000 promoter-TSS (NM_014481) promoter-TSS (NM_014481) -242 NM_014481 27301 Hs.659558 NM_014481 ENSG00000169188 APEX2 APE2|APEXL2|XTH2|ZGRF2 apurinic/apyrimidinic endodeoxyribonuclease 2 protein-coding chr3-5280 chr3 121414323 121414533 + 13.0 0.000 intron (NM_001348343, intron 25 of 27) intron (NM_001348343, intron 25 of 27) 131560 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chrX-2670 chrX 116496238 116496448 + 13.0 0.000 Intergenic L1MA2|LINE|L1 -33367 NM_001017978 203413 Hs.97892 NM_001017978 ENSG00000204019 CT83 CXorf61|KK-LC-1|KKLC1 cancer/testis antigen 83 protein-coding chr2-6426 chr2 148389481 148389691 + 13.0 0.000 intron (NM_018328, intron 5 of 14) L1PA17|LINE|L1 -255165 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr14-1038 chr14 90655010 90655220 + 13.0 0.000 intron (NM_001320421, intron 11 of 20) intron (NM_001320421, intron 11 of 20) 12486 NR_110134 101928909 Hs.662545 NR_110134 ENSG00000259163 LOC101928909 - uncharacterized LOC101928909 ncRNA KI270860.1-1 KI270860.1 50152 50362 + 13.0 0.000 NA NA NA NA chr9-1090 chr9 77819743 77819953 + 13.0 0.000 intron (NM_002072, intron 2 of 6) MIR|SINE|MIR -171526 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr19-1424 chr19 56105272 56105482 + 13.0 0.000 intron (NM_001002836, intron 1 of 2) intron (NM_001002836, intron 1 of 2) 15918 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr2-3228 chr2 231612262 231612472 + 13.0 0.000 Intergenic Intergenic 19503 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr3-7010 chr3 171041029 171041239 + 13.0 0.000 Intergenic MIRb|SINE|MIR -14414 NM_001278658 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr2-3356 chr2 232309053 232309263 + 13.0 0.000 intron (NR_046476, intron 14 of 20) HERV16-int|LTR|ERVL -69593 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr8-938 chr8 43172363 43172573 + 13.0 0.000 intron (NM_001363228, intron 8 of 15) intron (NM_001363228, intron 8 of 15) 32004 NM_001363228 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr1-4504 chr1 26794680 26794890 + 13.0 0.000 exon (NM_017837, exon 3 of 4) exon (NM_017837, exon 3 of 4) 6597 NM_001202554 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr17-1461 chr17 49968689 49968899 + 13.0 0.000 promoter-TSS (NM_138281) promoter-TSS (NM_138281) -396 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr19-2510 chr19 14888915 14889125 + 13.0 0.000 Intergenic LTR13_|LTR|ERVK -7665 NM_030901 26333 Hs.247717 NM_030901 ENSG00000185385 OR7A17 BC85395_4|HTPCRX19 olfactory receptor family 7 subfamily A member 17 protein-coding chr5-2366 chr5 80153646 80153856 + 13.0 0.000 intron (NR_126061, intron 8 of 13) MER20B|DNA|hAT-Charlie -70086 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr16-1429 chr16 48410110 48410320 + 13.0 0.000 Intergenic Intergenic -24802 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr6-2200 chr6 37990990 37991200 + 13.0 0.000 intron (NM_021943, intron 2 of 5) intron (NM_021943, intron 2 of 5) 171368 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr18-855 chr18 27223515 27223725 + 13.0 0.000 Intergenic L1PB1|LINE|L1 -38312 NM_031422 83539 Hs.44584 NM_031422 ENSG00000154080 CHST9 GALNAC4ST-2|GalNAc4ST2 carbohydrate sulfotransferase 9 protein-coding chr14-3076 chr14 62132504 62132714 + 13.0 0.000 non-coding (NR_015358, exon 4 of 4) non-coding (NR_015358, exon 4 of 4) 7364 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr1-4828 chr1 24308762 24308972 + 13.0 0.000 Intergenic Intergenic -10490 NM_198174 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr19-2563 chr19 56080796 56081006 + 13.0 0.000 Intergenic Intergenic 14217 NR_110741 101928886 Hs.434652 NR_110741 ENSG00000267522 LINC01864 - long intergenic non-protein coding RNA 1864 ncRNA chr17-2998 chr17 73469436 73469646 + 13.0 0.000 intron (NM_001144952, intron 3 of 44) intron (NM_001144952, intron 3 of 44) -44142 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr3-2064 chr3 172130060 172130270 + 13.0 0.000 intron (NM_001135095, intron 2 of 25) intron (NM_001135095, intron 2 of 25) 89634 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr7-3771 chr7 83000521 83000731 + 13.0 0.000 intron (NM_033026, intron 3 of 24) MER1B|DNA|hAT-Charlie 162258 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr7-1729 chr7 12585036 12585246 + 13.0 0.000 intron (NR_156701, intron 3 of 14) L2|LINE|L2 -4382 NM_033128 85477 Hs.633359 NM_033128 ENSG00000006747 SCIN - scinderin protein-coding chr1-5367 chr1 244382192 244382402 + 13.0 0.000 intron (NM_001276348, intron 4 of 4) L2a|LINE|L2 29662 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr19-2436 chr19 46078604 46078814 + 13.0 0.000 Intergenic Intergenic -1080 NR_163177 444882 Hs.531310 NM_001002923 ENSG00000204869 IGFL4 - IGF like family member 4 protein-coding chr11-7203 chr11 133503320 133503530 + 13.0 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) 29076 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr6-2100 chr6 158012038 158012248 + 13.0 0.000 intron (NM_003898, intron 1 of 26) intron (NM_003898, intron 1 of 26) -4950 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr2-3247 chr2 237838866 237839076 + 13.0 0.000 intron (NM_001080504, intron 15 of 15) MER68|LTR|ERVL -20652 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr4-2151 chr4 83490959 83491169 + 13.0 0.000 Intergenic Intergenic -5964 NM_001345962 84142 Hs.334772 NM_139076 ENSG00000163322 ABRAXAS1 ABRA1|CCDC98|FAM175A abraxas 1, BRCA1 A complex subunit protein-coding chr11-1581 chr11 129785334 129785544 + 13.0 0.000 Intergenic LTR25-int|LTR|ERV1 -30342 NM_001331211 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr1-3035 chr1 2073713 2073923 + 13.0 0.000 promoter-TSS (NM_001350805) promoter-TSS (NM_001350805) -168 NM_001242874 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr8-2541 chr8 27565240 27565450 + 13.0 0.000 Intergenic Intergenic 45406 NR_106902 102465508 NR_106902 ENSG00000284280 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA chr15-740 chr15 95843380 95843590 + 13.0 0.000 Intergenic Intergenic 284356 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr7-3692 chr7 50869391 50869601 + 13.0 0.000 Intergenic Intergenic -76043 NM_001371008 chr21-1236 chr21 45706077 45706287 + 13.0 0.000 intron (NM_001348238, intron 2 of 16) MER5B|DNA|hAT-Charlie 37308 NM_001348242 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr22-1336 chr22 20390406 20390616 + 13.0 0.000 Intergenic Intergenic -3604 NM_001256524 7625 Hs.517418 NM_003426 ENSG00000185252 ZNF74 COS52|ZFP520|ZNF520|hZNF7 zinc finger protein 74 protein-coding chr5-3008 chr5 6732679 6732889 + 13.0 0.000 intron (NM_001171805, intron 1 of 12) intron (NM_001171805, intron 1 of 12) 19352 NM_001171805 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr2-1789 chr2 239113883 239114093 + 13.0 0.000 intron (NM_006037, intron 13 of 26) intron (NM_006037, intron 13 of 26) -28062 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr3-2930 chr3 53776639 53776849 + 13.0 0.000 intron (NM_001128840, intron 36 of 47) intron (NM_001128840, intron 36 of 47) 69675 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr17-1198 chr17 75476430 75476640 + 13.0 0.000 promoter-TSS (NM_001351203) promoter-TSS (NM_001351203) -2 NM_001321148 9772 Hs.514474 NM_014738 ENSG00000177728 TMEM94 IDDCDF|KIAA0195 transmembrane protein 94 protein-coding chr12-1451 chr12 123571541 123571751 + 13.0 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 12681 NR_110049 101927415 Hs.636524 NR_110049 TMED2-DT - TMED2 divergent transcript ncRNA chr1-5706 chr1 63828649 63828859 + 13.0 0.000 intron (NM_005012, intron 1 of 8) L2a|LINE|L2 54737 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr9-4716 chr9 127492334 127492544 + 13.0 0.000 intron (NM_001005373, intron 20 of 25) intron (NM_001005373, intron 20 of 25) 40184 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chrX-1373 chrX 153065581 153065791 + 13.0 0.000 Intergenic Intergenic -6728 NM_032882 84968 Hs.533301 NM_032882 ENSG00000235961 PNMA6A MA6|PNMA6|PNMA6C PNMA family member 6A protein-coding chr12-5452 chr12 123483214 123483424 + 13.0 0.000 intron (NM_001319243, intron 6 of 7) MIR|SINE|MIR 23615 NM_180699 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chr4-4939 chr4 125702477 125702687 + 13.0 0.000 Intergenic MER57D|LTR|ERV1 195323 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr1-10205 chr1 113228931 113229141 + 13.0 0.000 Intergenic Intergenic -22783 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr2-1246 chr2 200288730 200288940 + 13.0 0.000 Intergenic Intergenic -17044 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr3-2287 chr3 100561439 100561649 + 13.0 0.000 intron (NM_001363876, intron 5 of 6) intron (NM_001363876, intron 5 of 6) -48057 NM_032787 84873 Hs.334511 NM_032787 ENSG00000144820 ADGRG7 GPR128 adhesion G protein-coupled receptor G7 protein-coding chr1-2335 chr1 235624608 235624818 + 13.0 0.000 intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 25071 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr1-3961 chr1 120176399 120176609 + 13.0 0.000 promoter-TSS (NM_004892) promoter-TSS (NM_004892) 16 NM_004892 9554 Hs.632438 NM_004892 ENSG00000265808 SEC22B ERS-24|SEC22L1 SEC22 homolog B, vesicle trafficking protein (gene/pseudogene) protein-coding chr13-1537 chr13 27276326 27276536 + 13.0 0.000 Intergenic Intergenic 5254 NM_001331126 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr1-2440 chr1 21601246 21601456 + 13.0 0.000 intron (NM_001350526, intron 24 of 28) L2b|LINE|L2 50081 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr2-3182 chr2 210050893 210051103 + 13.0 0.000 intron (NM_001307976, intron 6 of 13) AluJb|SINE|Alu 21076 NR_110291 101928020 Hs.635556 NR_110291 LOC101928020 - uncharacterized LOC101928020 ncRNA chr8-2283 chr8 103511928 103512138 + 13.0 0.000 intron (NM_001348497, intron 1 of 22) LTR41C|LTR|ERVL -10123 NR_145698 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA chr11-2793 chr11 83875795 83876005 + 12.8 0.000 intron (NM_001142700, intron 7 of 19) intron (NM_001142700, intron 7 of 19) -193475 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr20-1372 chr20 48722831 48723041 + 12.8 0.000 intron (NM_020820, intron 5 of 39) intron (NM_020820, intron 5 of 39) 105063 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr6-2768 chr6 130997042 130997252 + 12.8 0.000 intron (NM_001135554, intron 1 of 14) intron (NM_001135554, intron 1 of 14) 3620 NM_001252660 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr3-4604 chr3 196670015 196670225 + 12.8 0.000 Intergenic Intergenic 30426 NM_198565 375387 Hs.702186 NM_198565 ENSG00000174004 NRROS ELLP3030|GARPL1|LRRC33|UNQ3030 negative regulator of reactive oxygen species protein-coding chr5-1821 chr5 84403858 84404068 + 12.8 0.000 Intergenic MIR3|SINE|MIR -19083 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr15-1968 chr15 40063534 40063744 + 12.8 0.000 intron (NR_040060, intron 2 of 2) intron (NR_040060, intron 2 of 2) 24328 NR_040062 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr8-1400 chr8 41891444 41891654 + 12.8 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 5192 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr3-2279 chr3 70956486 70956696 + 12.8 0.000 non-coding (NR_146143, exon 20 of 20) non-coding (NR_146143, exon 20 of 20) 108333 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr7-1588 chr7 106178829 106179039 + 12.8 0.000 Intergenic MIR3|SINE|MIR -66358 NM_006754 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr1-6867 chr1 112524297 112524507 + 12.8 0.000 3' UTR (NM_138727, exon 15 of 15) 3' UTR (NM_138727, exon 15 of 15) 15437 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr22-1455 chr22 47337279 47337489 + 12.8 0.000 Intergenic LTR33B|LTR|ERVL -8187 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr17-1897 chr17 64230990 64231200 + 12.8 0.000 promoter-TSS (NM_001288733) promoter-TSS (NM_001288733) -361 NM_001288733 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr22-706 chr22 45537792 45538002 + 12.8 0.000 intron (NM_006487, intron 8 of 14) intron (NM_006487, intron 8 of 14) 35014 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr1-1265 chr1 16032972 16033182 + 12.8 0.000 intron (NM_001257139, intron 17 of 18) intron (NM_001257139, intron 17 of 18) -10659 NM_000085 1188 Hs.352243 NM_000085 ENSG00000184908 CLCNKB CLCKB|ClC-K2|ClC-Kb chloride voltage-gated channel Kb protein-coding chr5-1214 chr5 126983405 126983615 + 12.8 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 47048 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr17-2650 chr17 19000993 19001203 + 12.8 0.000 intron (NM_001039999, intron 2 of 5) MIRc|SINE|MIR 3666 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr10-2559 chr10 69333273 69333483 + 12.8 0.000 intron (NM_001322367, intron 1 of 16) intron (NM_001322367, intron 1 of 16) 14531 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chrX-893 chrX 53683266 53683476 + 12.8 0.000 intron (NM_031407, intron 2 of 83) intron (NM_031407, intron 2 of 83) 3348 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr12-1241 chr12 27899344 27899554 + 12.8 0.000 Intergenic Intergenic 70527 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr9-1586 chr9 91422850 91423060 + 12.8 0.000 intron (NM_001290000, intron 1 of 1) intron (NM_001290000, intron 1 of 1) 877 NM_005384 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr1-1379 chr1 89762984 89763194 + 12.8 0.000 Intergenic Intergenic -57943 NM_001134479 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 VRAC subunit D protein-coding chr8-1033 chr8 47738853 47739063 + 12.8 0.000 promoter-TSS (NM_005195) promoter-TSS (NM_005195) -794 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chrX-490 chrX 17459702 17459912 + 12.8 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) 33926 NR_039925 100616249 NR_039925 ENSG00000265465 MIR4768 - microRNA 4768 ncRNA chr10-3530 chr10 73522292 73522502 + 12.8 0.000 intron (NM_001320437, intron 15 of 21) intron (NM_001320437, intron 15 of 21) -26373 NM_001142353 5532 Hs.500067 NM_021132 ENSG00000107758 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3 catalytic subunit beta protein-coding chr5-1952 chr5 43034692 43034902 + 12.8 0.000 intron (NR_104651, intron 2 of 2) intron (NR_104651, intron 2 of 2) 5548 NM_001014279 389289 Hs.529385 NM_001014279 ENSG00000177721 ANXA2R AX2R|AXIIR|C5orf39 annexin A2 receptor protein-coding chr18-322 chr18 5296027 5296237 + 12.8 0.000 promoter-TSS (NM_001143823) promoter-TSS (NM_001143823) -112 NM_003409 7541 Hs.592340 NM_003409 ENSG00000198081 ZBTB14 ZF5|ZFP-161|ZFP-5|ZFP161|ZNF478 zinc finger and BTB domain containing 14 protein-coding chr22-546 chr22 44658738 44658948 + 12.8 0.000 Intergenic Intergenic -9704 NM_001017529 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr10-1576 chr10 5888276 5888486 + 12.8 0.000 intron (NM_019046, intron 1 of 7) intron (NM_019046, intron 1 of 7) -1191 NM_001258452 84893 Hs.498543 NM_032807 ENSG00000134452 FBH1 FBXO18|Fbx18|hFBH1 F-box DNA helicase 1 protein-coding chr3-6966 chr3 164456431 164456641 + 12.8 0.000 Intergenic L1MB3|LINE|L1 -284980 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr19-1482 chr19 10829507 10829717 + 12.8 0.000 TTS (NR_106851) TTS (NR_106851) 639 NR_106851 102466737 NR_106851 ENSG00000275640 MIR6793 hsa-mir-6793 microRNA 6793 ncRNA chr5-2221 chr5 179226635 179226845 + 12.8 0.000 intron (NM_014244, intron 3 of 21) L1ME4b|LINE|L1 118721 NM_014244 9509 Hs.23871 NM_014244 ENSG00000087116 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif 2 protein-coding chr9-3191 chr9 130016710 130016920 + 12.8 0.000 intron (NM_001363755, intron 1 of 15) intron (NM_001363755, intron 1 of 15) 26374 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr1-1528 chr1 89632788 89632998 + 12.8 0.000 promoter-TSS (NR_033981) promoter-TSS (NR_033981) 1 NR_033981 400761 Hs.741594 NR_033981 ENSG00000231999 LRRC8C-DT - LRRC8C divergent transcript ncRNA chr12-1178 chr12 56785359 56785569 + 12.8 0.000 intron (NM_003725, intron 4 of 4) intron (NM_003725, intron 4 of 4) 22140 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr16-2392 chr16 68371359 68371569 + 12.8 0.000 exon (NM_018667, exon 3 of 9) exon (NM_018667, exon 3 of 9) 60350 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr14-909 chr14 68598647 68598857 + 12.8 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 30035 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr17-1634 chr17 10114694 10114904 + 12.8 0.000 intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) -78142 NM_201432 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr7-2273 chr7 6106488 6106698 + 12.8 0.000 intron (NM_032172, intron 1 of 17) AluJo|SINE|Alu 1644 NM_001365764 84132 Hs.31856 NM_032172 ENSG00000106346 USP42 - ubiquitin specific peptidase 42 protein-coding chr3-1458 chr3 49689466 49689676 + 12.8 0.000 promoter-TSS (NR_135218) promoter-TSS (NR_135218) 14 NM_022064 63891 Hs.553723 NM_022064 ENSG00000164068 RNF123 FP1477|KPC1 ring finger protein 123 protein-coding chr14-903 chr14 56422565 56422775 + 12.8 0.000 Intergenic Intergenic -91661 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr4-2092 chr4 39622542 39622752 + 12.8 0.000 intron (NM_001317896, intron 1 of 5) AluSz|SINE|Alu 4474 NM_001317897 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr5-1370 chr5 67301248 67301458 + 12.8 0.000 Intergenic Intergenic -104554 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr7-5726 chr7 72619969 72620179 + 12.8 0.000 intron (NM_001145440, intron 12 of 13) intron (NM_001145440, intron 12 of 13) -77829 NR_039793 100616310 NR_039793 ENSG00000266525 MIR4650-1 - microRNA 4650-1 ncRNA chr18-499 chr18 21686559 21686769 + 12.8 0.000 intron (NM_138340, intron 3 of 8) intron (NM_138340, intron 3 of 8) 3146 NR_031565 100302135 NR_031565 ENSG00000221493 MIR320C1 MIR320C-1|MIRN320C1|hsa-mir-320c-1|mir-320c-1 microRNA 320c-1 ncRNA chr10-2435 chr10 4074550 4074760 + 12.8 0.000 intron (NR_120632, intron 1 of 3) L1ME1|LINE|L1 22929 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA chrX-1387 chrX 154010646 154010856 + 12.8 0.000 3' UTR (NM_001025243, exon 13 of 13) 3' UTR (NM_001025243, exon 13 of 13) 9151 NM_001569 3654 Hs.522819 NM_001569 ENSG00000184216 IRAK1 IRAK|pelle interleukin 1 receptor associated kinase 1 protein-coding chr5-2215 chr5 177098780 177098990 + 12.8 0.000 TTS (NM_001354984) TTS (NM_001354984) 9335 NM_022963 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr10-4979 chr10 30579521 30579731 + 12.8 0.000 Intergenic MamRep1527|LTR|LTR 50127 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr11-3742 chr11 34614685 34614895 + 12.8 0.000 Intergenic Intergenic -6303 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr6-2076 chr6 131333027 131333237 + 12.8 0.000 Intergenic Intergenic 82728 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr1-4502 chr1 25590273 25590483 + 12.8 0.000 Intergenic L2b|LINE|L2 -27090 NM_001289010 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr17-2067 chr17 67671632 67671842 + 12.8 0.000 intron (NM_181671, intron 7 of 9) intron (NM_181671, intron 7 of 9) -46096 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr15-2168 chr15 78727903 78728113 + 12.8 0.000 Intergenic Intergenic -24029 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr20-945 chr20 31842795 31843005 + 12.8 0.000 Intergenic Intergenic 2704 NM_004118 2307 Hs.516971 NM_004118 ENSG00000179772 FOXS1 FKHL18|FREAC10 forkhead box S1 protein-coding chr13-1280 chr13 114194032 114194242 + 12.8 0.000 Intergenic L1MC5|LINE|L1 -40708 NM_003903 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chr7-2932 chr7 137081738 137081948 + 12.8 0.000 intron (NR_046103, intron 1 of 3) intron (NR_046103, intron 1 of 3) 82498 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA chr4-1102 chr4 1842945 1843155 + 12.8 0.000 intron (NM_012318, intron 2 of 13) intron (NM_012318, intron 2 of 13) 13106 NM_012318 3954 Hs.120165 NM_012318 ENSG00000168924 LETM1 SLC55A1 leucine zipper and EF-hand containing transmembrane protein 1 protein-coding chr3-2854 chr3 35416799 35417009 + 12.8 0.000 Intergenic Intergenic -22881 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr6-1270 chr6 56766869 56767079 + 12.8 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 76691 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr3-5766 chr3 22874286 22874496 + 12.8 0.000 Intergenic Intergenic 328187 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr19-2321 chr19 18801267 18801477 + 12.8 0.000 Intergenic Intergenic -10067 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr13-1149 chr13 32285685 32285895 + 12.8 0.000 intron (NM_023037, intron 58 of 60) intron (NM_023037, intron 58 of 60) 26164 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr11-3067 chr11 12232972 12233182 + 12.8 0.000 intron (NR_144420, intron 15 of 27) Tigger7|DNA|TcMar-Tigger -53823 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr1-7309 chr1 246261977 246262187 + 12.8 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 155330 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-1486 chr1 184388521 184388731 + 12.8 0.000 intron (NM_030806, intron 1 of 5) (T)n|Simple_repeat|Simple_repeat 1597 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr16-1207 chr16 57372277 57372487 + 12.8 0.000 promoter-TSS (NM_002996) promoter-TSS (NM_002996) -108 NM_002996 6376 Hs.531668 NM_002996 ENSG00000006210 CX3CL1 ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin C-X3-C motif chemokine ligand 1 protein-coding chr7-2010 chr7 40008109 40008319 + 12.8 0.000 intron (NM_003718, intron 5 of 13) MER3|DNA|hAT-Charlie 57854 NM_031267 8621 Hs.233552 NM_003718 ENSG00000065883 CDK13 CDC2L|CDC2L5|CHDFIDD|CHED|hCDK13 cyclin dependent kinase 13 protein-coding chr13-777 chr13 33800372 33800582 + 12.8 0.000 Intergenic Intergenic -17592 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr2-1924 chr2 195898835 195899045 + 12.8 0.000 intron (NM_018897, intron 28 of 64) intron (NM_018897, intron 28 of 64) 169897 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr8-1379 chr8 13366858 13367068 + 12.8 0.000 intron (NM_024767, intron 4 of 4) intron (NM_024767, intron 4 of 4) -90179 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr19-2720 chr19 33184237 33184447 + 12.8 0.000 Intergenic ERVL-B4-int|LTR|ERVL -9988 NM_002333 4037 Hs.515340 NM_002333 ENSG00000130881 LRP3 - LDL receptor related protein 3 protein-coding chrX-1245 chrX 96783878 96784088 + 12.8 0.000 intron (NM_007309, intron 4 of 26) intron (NM_007309, intron 4 of 26) 99141 NM_006729 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr13-751 chr13 44907003 44907213 + 12.8 0.000 Intergenic Intergenic 82363 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 nuclear FMR1 interacting protein 1 protein-coding chr12-1921 chr12 94644663 94644873 + 12.8 0.000 intron (NM_020698, intron 1 of 3) intron (NM_020698, intron 1 of 3) 5789 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr19-1690 chr19 10193869 10194079 + 12.8 0.000 intron (NM_001379, intron 1 of 39) intron (NM_001379, intron 1 of 39) 979 NM_001318730 1786 Hs.202672 NM_001379 ENSG00000130816 DNMT1 ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT|m.HsaI DNA methyltransferase 1 protein-coding chr1-6676 chr1 51690286 51690496 + 12.8 0.000 intron (NM_148906, intron 2 of 22) intron (NM_148906, intron 2 of 22) -39459 NM_148904 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr1-5308 chr1 220076942 220077152 + 12.8 0.000 intron (NM_001286149, intron 1 of 7) L3|LINE|CR1 12741 NM_006085 10380 Hs.406134 NM_006085 ENSG00000162813 BPNT1 HEL20|PIP 3'(2'), 5'-bisphosphate nucleotidase 1 protein-coding chr12-3679 chr12 125039282 125039492 + 12.8 0.000 Intergenic Intergenic -11964 NR_110375 102659353 Hs.596464 NR_110375 ENSG00000280634 THRIL BRI3BP-AS1|BRI3BPAS1|Linc1992|TCONS_00020260 TNF and HNRNPL related immunoregulatory long non-coding RNA ncRNA chr1-2052 chr1 1623323 1623533 + 12.8 0.000 exon (NM_001170688, exon 3 of 19) exon (NM_001170688, exon 3 of 19) 7573 NM_001170689 142678 Hs.135805 NM_080875 ENSG00000197530 MIB2 ZZANK1|ZZZ5 mindbomb E3 ubiquitin protein ligase 2 protein-coding chr2-3846 chr2 32491268 32491478 + 12.8 0.000 intron (NM_016252, intron 43 of 73) intron (NM_016252, intron 43 of 73) -40780 NR_030285 693143 NR_030285 ENSG00000207653 MIR558 MIRN558|hsa-mir-558 microRNA 558 ncRNA chr3-1295 chr3 132660591 132660801 + 12.8 0.000 promoter-TSS (NM_001321238) promoter-TSS (NM_001321238) -1 NM_001321238 79876 Hs.170737 NM_024818 ENSG00000081307 UBA5 EIEE44|SCAR24|THIFP1|UBE1DC1 ubiquitin like modifier activating enzyme 5 protein-coding chr15-623 chr15 56246108 56246318 + 12.8 0.000 Intergenic Intergenic -1131 NM_001370561 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr1-5368 chr1 244896690 244896900 + 12.8 0.000 Intergenic HAL1|LINE|L1 -32252 NM_031844 3192 Hs.106212 NM_004501 ENSG00000153187 HNRNPU EIEE54|GRIP120|HNRNPU-AS1|HNRPU|SAF-A|SAFA|U21.1|hnRNP U|pp120 heterogeneous nuclear ribonucleoprotein U protein-coding chr4-2592 chr4 118842175 118842385 + 12.8 0.000 Intergenic Intergenic -6154 NM_014822 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr2-3628 chr2 122634300 122634510 + 12.8 0.000 Intergenic Intergenic 439076 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr6-1308 chr6 3205952 3206162 + 12.8 0.000 Intergenic Intergenic -10290 NR_038296 100507194 Hs.678053 NR_038295 ENSG00000230269 LINC02525 - long intergenic non-protein coding RNA 2525 ncRNA chr8-1194 chr8 56759970 56760180 + 12.8 0.000 Intergenic Intergenic -200252 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr8-1106 chr8 58563878 58564088 + 12.8 0.000 intron (NM_001348340, intron 2 of 9) LTR41|LTR|ERVL 10722 NM_005625 6386 Hs.200804 NM_005625 ENSG00000137575 SDCBP MDA-9|MDA9|ST1|SYCL|TACIP18 syndecan binding protein protein-coding chr2-1361 chr2 1572670 1572880 + 12.8 0.000 Intergenic Intergenic 158367 NM_175722 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chr11-5265 chr11 33734459 33734669 + 12.8 0.000 intron (NM_203329, intron 1 of 4) intron (NM_203329, intron 1 of 4) 1915 NM_203329 966 Hs.278573 NM_000611 ENSG00000085063 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule (CD59 blood group) protein-coding chr5-1261 chr5 73867294 73867504 + 12.8 0.000 intron (NM_001177693, intron 18 of 35) intron (NM_001177693, intron 18 of 35) 53853 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr1-1960 chr1 109397897 109398107 + 12.8 0.000 promoter-TSS (NM_002959) promoter-TSS (NM_002959) -84 NM_002959 6272 Hs.485195 NM_002959 ENSG00000134243 SORT1 Gp95|LDLCQ6|NT3|NTR3 sortilin 1 protein-coding chr16-1988 chr16 88953287 88953497 + 12.8 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) -12042 NM_175931 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr6-1154 chr6 10414842 10415052 + 12.8 0.000 exon (NM_003220, exon 1 of 7) exon (NM_003220, exon 1 of 7) 127 NM_003220 7020 Hs.519880 NM_003220 ENSG00000137203 TFAP2A AP-2|AP-2alpha|AP2TF|BOFS|TFAP2 transcription factor AP-2 alpha protein-coding chr13-826 chr13 44922353 44922563 + 12.8 0.000 Intergenic Intergenic 67013 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 nuclear FMR1 interacting protein 1 protein-coding chr2-1752 chr2 74768393 74768603 + 12.8 0.000 Intergenic Intergenic -64157 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr8-1198 chr8 61404932 61405142 + 12.8 0.000 intron (NM_173519, intron 3 of 5) intron (NM_173519, intron 3 of 5) 117067 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr9-2470 chr9 36741235 36741445 + 12.8 0.000 Intergenic Intergenic 82259 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr3-1099 chr3 39051965 39052175 + 12.8 0.000 promoter-TSS (NM_001303403) promoter-TSS (NM_001303403) 54 NR_144399 57599 Hs.109778 NM_020839 ENSG00000114742 WDR48 P80|SPG60|UAF1 WD repeat domain 48 protein-coding chr17-1882 chr17 47257851 47258061 + 12.8 0.000 intron (NM_000212, intron 1 of 14) intron (NM_000212, intron 1 of 14) 4114 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chr17-4653 chr17 17396906 17397116 + 12.8 0.000 Intergenic L1ME3C|LINE|L1 -79989 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr18-138 chr18 35972392 35972602 + 12.8 0.000 promoter-TSS (NM_001201474) promoter-TSS (NM_001201474) -128 NM_001201475 83608 Hs.37883 NM_031446 ENSG00000141428 C18orf21 HsT3108|PNAS-124|PNAS-131|XTP13 chromosome 18 open reading frame 21 protein-coding chr1-1125 chr1 115641781 115641991 + 12.8 0.000 promoter-TSS (NM_138959) promoter-TSS (NM_138959) -84 NM_001172411 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr17-2722 chr17 72126668 72126878 + 12.8 0.000 TTS (NM_000346) TTS (NM_000346) 5753 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box transcription factor 9 protein-coding chr16-3367 chr16 54761522 54761732 + 12.8 0.000 Intergenic MIR|SINE|MIR 86606 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr7-3798 chr7 91942287 91942497 + 12.8 0.000 intron (NM_147185, intron 1 of 49) intron (NM_147185, intron 1 of 49) 1517 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr5-2961 chr5 168059436 168059646 + 12.8 0.000 intron (NM_001368145, intron 5 of 26) intron (NM_001368145, intron 5 of 26) -106304 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr18-1240 chr18 49464973 49465183 + 12.8 0.000 Intergenic Intergenic -4433 NM_001353216 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr17-5273 chr17 20268966 20269176 + 12.8 0.000 intron (NM_001033553, intron 12 of 14) intron (NM_001033553, intron 12 of 14) -52103 NR_023380 348254 Hs.462475 NR_023380 CCDC144CP CCDC144C coiled-coil domain containing 144C, pseudogene pseudo chr20-3456 chr20 51169178 51169388 + 12.8 0.000 Intergenic L1MEf|LINE|L1 -146176 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr9-2459 chr9 27204753 27204963 + 12.8 0.000 intron (NM_001290077, intron 12 of 21) intron (NM_001290077, intron 12 of 21) 77935 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA chr5-1399 chr5 140324775 140324985 + 12.8 0.000 Intergenic Intergenic 21723 NM_001945 1839 Hs.799 NM_001945 ENSG00000113070 HBEGF DTR|DTS|DTSF|HEGFL heparin binding EGF like growth factor protein-coding chr5-1698 chr5 98936936 98937146 + 12.8 0.000 intron (NR_151718, intron 1 of 3) MLT1O|LTR|ERVL-MaLR -7327 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr3-1665 chr3 177836013 177836223 + 12.8 0.000 intron (NR_110826, intron 1 of 2) L2a|LINE|L2 19253 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr11-1158 chr11 14413522 14413732 + 12.8 0.000 Intergenic MER113|DNA|hAT-Charlie -49121 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr2-3189 chr2 215751397 215751607 + 12.8 0.000 intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 33459 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr2-2906 chr2 224754133 224754343 + 12.8 0.000 Intergenic Intergenic -168841 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr4-803 chr4 56434964 56435174 + 12.8 0.000 promoter-TSS (NM_006452) promoter-TSS (NM_006452) 546 NM_002703 5471 Hs.331420 NM_002703 ENSG00000128059 PPAT ATASE|GPAT|PRAT phosphoribosyl pyrophosphate amidotransferase protein-coding chr19-2655 chr19 9910798 9911008 + 12.8 0.000 intron (NM_058164, intron 1 of 5) (ATGG)n|Simple_repeat|Simple_repeat 2898 NM_001304347 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr8-1900 chr8 26697333 26697543 + 12.8 0.000 Intergenic ERVL-E-int|LTR|ERVL 119033 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr7-958 chr7 158740171 158740381 + 12.8 0.000 intron (NM_020728, intron 17 of 21) MER49|LTR|ERV1 -35472 NM_001281933 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr7-1072 chr7 50449900 50450110 + 12.8 0.000 intron (NM_022116, intron 1 of 3) CpG 345 NM_001346560 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr20-797 chr20 63573740 63573950 + 12.8 0.000 intron (NM_001037335, intron 1 of 19) intron (NM_001037335, intron 1 of 19) 394 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr5-3147 chr5 65919838 65920048 + 12.8 0.000 Intergenic Intergenic -6611 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr3-2523 chr3 27714508 27714718 + 12.8 0.000 Intergenic Intergenic 7710 NM_001278182 8320 Hs.591663 NM_005442 ENSG00000163508 EOMES TBR2 eomesodermin protein-coding chr7-3887 chr7 110575936 110576146 + 12.8 0.000 Intergenic MER91A|DNA|hAT-Tip100 -514965 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr20-2655 chr20 44394431 44394641 + 12.8 0.000 intron (NR_109949, intron 1 of 3) intron (NR_109949, intron 1 of 3) 1170 NR_109949 101927219 Hs.655919 NR_109949 ENSG00000229005 HNF4A-AS1 uc002xlx HNF4A antisense RNA 1 ncRNA chr2-2134 chr2 101806706 101806916 + 12.8 0.000 intron (NM_145686, intron 3 of 30) intron (NM_145686, intron 3 of 30) 109104 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr12-847 chr12 123446099 123446309 + 12.8 0.000 Intergenic MamRep488|DNA|hAT-Tip100 -9471 NR_130703 196383 Hs.488173 NM_145058 ENSG00000150977 RILPL2 RLP2 Rab interacting lysosomal protein like 2 protein-coding chr2-1501 chr2 12534778 12534988 + 12.8 0.000 intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) -181989 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr10-3525 chr10 72872469 72872679 + 12.8 0.000 intron (NM_138357, intron 6 of 7) L1MA4|LINE|L1 -21165 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr17-1741 chr17 82382913 82383123 + 12.8 0.000 Intergenic Intergenic 8741 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr21-580 chr21 21132240 21132450 + 12.8 0.000 intron (NM_001352595, intron 1 of 14) MLT1D|LTR|ERVL-MaLR -14817 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr10-2131 chr10 20106168 20106378 + 12.8 0.000 intron (NM_032812, intron 4 of 13) intron (NM_032812, intron 4 of 13) 289841 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr11-2615 chr11 4187443 4187653 + 12.8 0.000 intron (NR_047550, intron 1 of 1) CpG 396 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LINC02749 - long intergenic non-protein coding RNA 2749 ncRNA chr1-6115 chr1 155993482 155993692 + 12.8 0.000 Intergenic Intergenic -14027 NM_001350112 9181 Hs.743352 NM_004723 ENSG00000116584 ARHGEF2 GEF|GEF-H1|GEFH1|LFP40|NEDMHM|P40 Rho/Rac guanine nucleotide exchange factor 2 protein-coding chr10-2257 chr10 112836027 112836237 + 12.8 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) 12636 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr2-7028 chr2 151851825 151852035 + 12.8 0.000 intron (NM_000726, intron 12 of 13) intron (NM_000726, intron 12 of 13) -23509 NM_177985 26225 Hs.470233 NM_012097 ENSG00000162980 ARL5A ARFLP5|ARL5 ADP ribosylation factor like GTPase 5A protein-coding chr1-2347 chr1 23778185 23778395 + 12.8 0.000 promoter-TSS (NR_038280) promoter-TSS (NR_038280) 7 NR_038280 100506963 Hs.592549 NR_038280 ENSG00000236810 ELOA-AS1 TCEB3-AS1 ELOA antisense RNA 1 ncRNA chr1-4285 chr1 15795044 15795254 + 12.8 0.000 Intergenic Intergenic 12550 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL - ubiquinol-cytochrome c reductase hinge protein like protein-coding chr3-2771 chr3 169241782 169241992 + 12.8 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -94416 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr5-1950 chr5 33701349 33701559 + 12.8 0.000 intron (NM_001324512, intron 3 of 21) intron (NM_001324512, intron 3 of 21) 190536 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chr10-4981 chr10 30682516 30682726 + 12.8 0.000 Intergenic Intergenic -9653 NR_036438 645954 Hs.408581 NR_036438 SVIL2P SVILP1 supervillin family member 2, pseudogene pseudo chr2-5399 chr2 108171961 108172171 + 12.8 0.000 intron (NR_131251, intron 3 of 4) intron (NR_131251, intron 3 of 4) 45775 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA chr2-1895 chr2 120253544 120253754 + 12.8 0.000 intron (NM_002881, intron 1 of 4) CpG 797 NM_001369400 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr2-3915 chr2 48353214 48353424 + 12.8 0.000 intron (NM_002158, intron 3 of 6) L2c|LINE|L2 38637 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr3-2211 chr3 23859107 23859317 + 12.8 0.000 intron (NM_003341, intron 3 of 5) intron (NM_003341, intron 3 of 5) 48758 NM_001202476 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr1-3842 chr1 28538791 28539001 + 12.8 0.000 non-coding (NR_030725, exon 13 of 13) non-coding (NR_030725, exon 13 of 13) -14121 NR_003109 54952 Hs.533626 NM_017846 ENSG00000180098 TRNAU1AP PRO1902|SECP43|TRSPAP1 tRNA selenocysteine 1 associated protein 1 protein-coding chr3-4354 chr3 184875149 184875359 + 12.8 0.000 intron (NM_001009921, intron 20 of 46) intron (NM_001009921, intron 20 of 46) 62747 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr4-2783 chr4 20945133 20945343 + 12.8 0.000 intron (NM_147182, intron 2 of 8) MER5A1|DNA|hAT-Charlie 38771 NM_001363504 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr5-1984 chr5 150623044 150623254 + 12.8 0.000 intron (NM_001166208, intron 2 of 2) intron (NM_001166208, intron 2 of 2) 5505 NM_001166209 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr2-1524 chr2 85611895 85612105 + 12.8 0.000 promoter-TSS (NM_001256728) promoter-TSS (NM_001256728) 66 NM_001013649 388969 Hs.516159 NM_001013649 ENSG00000168887 C2orf68 HCRCN81 chromosome 2 open reading frame 68 protein-coding chr10-1946 chr10 14698634 14698844 + 12.8 0.000 intron (NM_031453, intron 1 of 4) intron (NM_031453, intron 1 of 4) 76158 NM_001282695 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr6-3117 chr6 100257995 100258205 + 12.8 0.000 Intergenic Intergenic 205575 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr2-1870 chr2 30026125 30026335 + 12.8 0.000 Intergenic Intergenic -104644 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr2-2330 chr2 157261276 157261486 + 12.8 0.000 intron (NM_014568, intron 1 of 9) intron (NM_014568, intron 1 of 9) 3676 NM_001329868 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr2-3943 chr2 63465805 63466015 + 12.8 0.000 intron (NR_148704, intron 7 of 18) MER119|DNA|hAT-Charlie -27903 NM_001042692 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr1-3898 chr1 62467133 62467343 + 12.8 0.000 intron (NM_001367561, intron 48 of 49) Tigger2|DNA|TcMar-Tigger 30189 NM_003368 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr11-2546 chr11 86762141 86762351 + 12.8 0.000 Intergenic Intergenic -28825 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr20-1447 chr20 53773824 53774034 + 12.8 0.000 Intergenic MIRb|SINE|MIR 101780 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr11-864 chr11 117232239 117232449 + 12.8 0.000 promoter-TSS (NM_001278249) promoter-TSS (NM_001278249) -271 NM_004716 9159 Hs.648612 NM_004716 ENSG00000160613 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding chr1-3736 chr1 236503236 236503446 + 12.8 0.000 Intergenic Intergenic -14873 NM_201545 3964 Hs.4082 NM_006499 ENSG00000116977 LGALS8 Gal-8|PCTA-1|PCTA1|Po66-CBP galectin 8 protein-coding chr6-1585 chr6 24581120 24581330 + 12.8 0.000 intron (NM_001350410, intron 7 of 21) intron (NM_001350410, intron 7 of 21) 2002 NM_001252328 9856 Hs.26441 NM_014809 ENSG00000137261 KIAA0319 AAVR|DYLX2|DYX2|NMIG KIAA0319 protein-coding chr6-1273 chr6 73063015 73063225 + 12.8 0.000 intron (NM_001160132, intron 3 of 13) intron (NM_001160132, intron 3 of 13) 80394 NR_046621 100873997 Hs.741819 NR_046621 ENSG00000229154 KCNQ5-AS1 - KCNQ5 antisense RNA 1 ncRNA chr14-1470 chr14 20262760 20262970 + 12.8 0.000 Intergenic Intergenic 20073 NM_001004479 390442 Hs.553767 NM_001004479 ENSG00000176198 OR11H4 OR14-36 olfactory receptor family 11 subfamily H member 4 protein-coding chr6-2286 chr6 85078135 85078345 + 12.8 0.000 Intergenic Intergenic 311946 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr1-3729 chr1 225772390 225772600 + 12.8 0.000 Intergenic Intergenic -5318 NM_003133 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding chr1-2316 chr1 93980001 93980211 + 12.8 0.000 Intergenic Intergenic -70508 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr8-2752 chr8 109180117 109180327 + 12.8 0.000 Intergenic Intergenic 93594 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr4-1623 chr4 73902252 73902462 + 12.8 0.000 Intergenic Intergenic 32964 NM_001511 2919 Hs.789 NM_001511 ENSG00000163739 CXCL1 FSP|GRO1|GROa|MGSA|MGSA-a|NAP-3|SCYB1 C-X-C motif chemokine ligand 1 protein-coding chr11-3727 chr11 18811873 18812083 + 12.8 0.000 Intergenic MSTA|LTR|ERVL-MaLR -19257 NM_001278236 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr2-2051 chr2 169824744 169824954 + 12.8 0.000 promoter-TSS (NM_014168) promoter-TSS (NM_014168) 56 NM_014168 29081 Hs.470553 NM_014168 ENSG00000138382 METTL5 HSPC133 methyltransferase like 5 protein-coding chr10-2145 chr10 69716111 69716321 + 12.8 0.000 Intergenic L2b|LINE|L2 -85690 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr12-1596 chr12 15581218 15581428 + 12.8 0.000 intron (NM_030671, intron 10 of 13) AluSx3|SINE|Alu 34712 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr1-4193 chr1 59316745 59316955 + 12.8 0.000 intron (NR_103473, intron 2 of 16) intron (NR_103473, intron 2 of 16) 6818 NM_001350799 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr1-3263 chr1 211260906 211261116 + 12.8 0.000 intron (NM_018254, intron 1 of 10) intron (NM_018254, intron 1 of 10) 1064 NM_018254 55758 Hs.356399 NM_018254 ENSG00000117625 RCOR3 - REST corepressor 3 protein-coding chr4-1121 chr4 122854721 122854931 + 12.8 0.000 intron (NM_001361665, intron 1 of 2) intron (NM_001361665, intron 1 of 2) 27995 NM_001361665 2247 Hs.284244 NM_002006 ENSG00000138685 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 protein-coding chr4-1606 chr4 40577160 40577370 + 12.8 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) 52599 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr5-2318 chr5 59587511 59587721 + 12.8 0.000 promoter-TSS (NM_001364604) promoter-TSS (NM_001364604) 9 NM_001364604 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr14-1384 chr14 44640498 44640708 + 12.8 0.000 Intergenic L2c|LINE|L2 133194 NR_135257 105370473 Hs.180134 NR_135257 ENSG00000258747 LOC105370473 - uncharacterized LOC105370473 ncRNA chr4-1745 chr4 106541310 106541520 + 12.8 0.000 Intergenic L1ME3|LINE|L1 107791 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA chr12-2198 chr12 24821639 24821849 + 12.8 0.000 intron (NM_001178091, intron 9 of 9) intron (NM_001178091, intron 9 of 9) 80478 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr10-3698 chr10 106822206 106822416 + 12.8 0.000 intron (NM_001206569, intron 3 of 25) intron (NM_001206569, intron 3 of 25) 342395 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr20-847 chr20 37319482 37319692 + 12.8 0.000 Intergenic L2|LINE|L2 -25098 NM_005417 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr5-2056 chr5 128637198 128637408 + 12.8 0.000 Intergenic MER63A|DNA|hAT-Blackjack -99058 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr5-721 chr5 124629256 124629466 + 12.8 0.000 Intergenic Intergenic 115751 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr8-886 chr8 33591073 33591283 + 12.8 0.000 TTS (NM_001305116) TTS (NM_001305116) 6619 NM_001305116 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr3-1911 chr3 169953624 169953834 + 12.8 0.000 TTS (NR_024409) TTS (NR_024409) 13005 NR_024409 100128164 Hs.633070 NR_024409 ENSG00000239219 LOC100128164 - four and a half LIM domains 1 pseudogene pseudo chr16-1423 chr16 11603180 11603390 + 12.8 0.000 Intergenic Intergenic -15819 NR_024320 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr2-1988 chr2 38778578 38778788 + 12.8 0.000 intron (NM_024775, intron 1 of 2) intron (NM_024775, intron 1 of 2) 473 NM_024775 79833 Hs.143818 NM_024775 ENSG00000152147 GEMIN6 - gem nuclear organelle associated protein 6 protein-coding chrX-285 chrX 41333362 41333572 + 12.8 0.000 promoter-TSS (NM_001193416) promoter-TSS (NM_001193416) 159 NM_001356 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr10-3564 chr10 79211552 79211762 + 12.8 0.000 intron (NM_020338, intron 6 of 24) intron (NM_020338, intron 6 of 24) -135812 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr3-2898 chr3 49187833 49188043 + 12.8 0.000 intron (NM_001080528, intron 2 of 3) intron (NM_001080528, intron 2 of 3) 3920 NM_001080528 646498 NM_001080528 ENSG00000236980 C3orf84 - chromosome 3 open reading frame 84 protein-coding chr7-2896 chr7 130847605 130847815 + 12.8 0.000 Intergenic AluJr|SINE|Alu 29100 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr4-1780 chr4 1889909 1890119 + 12.8 0.000 intron (NM_001042424, intron 1 of 21) L1MB7|LINE|L1 -2768 NM_133331 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr14-1561 chr14 70888726 70888936 + 12.8 0.000 Intergenic Intergenic -18628 NM_014982 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr3-4718 chr3 60064649 60064859 + 12.8 0.000 intron (NM_001320901, intron 2 of 6) intron (NM_001320901, intron 2 of 6) 16155 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr4-1554 chr4 699448 699658 + 12.8 0.000 Intergenic L1MC5|LINE|L1 -6279 NM_006315 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr10-1617 chr10 69895824 69896034 + 12.8 0.000 intron (NM_001368898, intron 9 of 33) intron (NM_001368898, intron 9 of 33) 94023 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr4-3961 chr4 182955655 182955865 + 12.8 0.000 Intergenic ERVL-E-int|LTR|ERVL -38283 NM_001921 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chrX-536 chrX 104454939 104455149 + 12.8 0.000 Intergenic Intergenic -111155 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr5-1699 chr5 100903214 100903424 + 12.8 0.000 promoter-TSS (NM_175052) promoter-TSS (NM_175052) -37 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr12-1563 chr12 113096209 113096419 + 12.8 0.000 intron (NM_004416, intron 8 of 8) AluJr|SINE|Alu 38457 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 RNF140|hDx-1 deltex E3 ubiquitin ligase 1 protein-coding chr3-2482 chr3 140292330 140292540 + 12.8 0.000 intron (NM_022131, intron 2 of 16) L2a|LINE|L2 216354 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr2-6858 chr2 73839199 73839409 + 12.8 0.000 intron (NR_148670, intron 3 of 12) intron (NR_148670, intron 3 of 12) 10337 NM_001353974 10617 Hs.469018 NM_006463 ENSG00000124356 STAMBP AMSH|MICCAP STAM binding protein protein-coding chr11-2932 chr11 69049707 69049917 + 12.8 0.000 intron (NM_139075, intron 1 of 24) intron (NM_139075, intron 1 of 24) 880 NM_139075 219931 Hs.131851 NM_139075 ENSG00000162341 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding chr12-1545 chr12 96236177 96236387 + 12.8 0.000 intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) -19216 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr2-4175 chr2 187658986 187659196 + 12.8 0.000 Intergenic MER61-int|LTR|ERV1 -104586 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr10-1599 chr10 38054492 38054702 + 12.8 0.000 exon (NM_006974, exon 5 of 5) exon (NM_006974, exon 5 of 5) -39739 NM_001007094 7587 Hs.292575 NM_003421 ENSG00000075407 ZNF37A KOX21|ZNF37 zinc finger protein 37A protein-coding chr17-1772 chr17 34255236 34255446 + 12.8 0.000 promoter-TSS (NM_002982) promoter-TSS (NM_002982) 56 NM_002982 6347 Hs.303649 NM_002982 ENSG00000108691 CCL2 GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF C-C motif chemokine ligand 2 protein-coding chr10-1846 chr10 58291549 58291759 + 12.8 0.000 Intergenic Intergenic 22492 NM_018464 55847 Hs.370102 NM_018464 ENSG00000122873 CISD1 C10orf70|MDS029|ZCD1|mitoNEET CDGSH iron sulfur domain 1 protein-coding chr9-1249 chr9 34254764 34254974 + 12.8 0.000 intron (NM_194313, intron 12 of 12) intron (NM_194313, intron 12 of 12) 74399 NM_194313 347240 Hs.710246 NM_194313 ENSG00000186638 KIF24 C9orf48|bA571F15.4 kinesin family member 24 protein-coding chr12-3662 chr12 120196328 120196538 + 12.8 0.000 TTS (NM_053275) TTS (NM_053275) -1718 NM_006836 10985 Hs.298716 NM_006836 ENSG00000089154 GCN1 GCN1L|GCN1L1|PRIC295 GCN1 activator of EIF2AK4 protein-coding chr8-850 chr8 22089441 22089651 + 12.8 0.000 intron (NR_148730, intron 1 of 17) CpG 392 NR_148727 64760 Hs.491223 NM_022749 ENSG00000158863 FAM160B2 RAI16 family with sequence similarity 160 member B2 protein-coding chr17-2135 chr17 29640550 29640760 + 12.8 0.000 intron (NM_033389, intron 13 of 14) intron (NM_033389, intron 13 of 14) -19232 NM_032854 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chr5-3113 chr5 53729935 53730145 + 12.8 0.000 Intergenic L1MB2|LINE|L1 89642 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr7-2184 chr7 84025541 84025751 + 12.8 0.000 intron (NM_006080, intron 6 of 16) intron (NM_006080, intron 6 of 16) 169143 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr10-3695 chr10 106006998 106007208 + 12.8 0.000 Intergenic Intergenic -133062 NR_134331 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr11-2654 chr11 61326331 61326541 + 12.8 0.000 intron (NM_001923, intron 5 of 26) SVA_A|Retroposon|SVA -6746 NM_001351978 26007 Hs.6278 NM_015533 ENSG00000149476 TKFC DAK|NET45 triokinase and FMN cyclase protein-coding chr17-3683 chr17 13394501 13394711 + 12.8 0.000 Intergenic Intergenic -87846 NR_146885 105371541 NR_146885 ENSG00000234634 LINC02093 - long intergenic non-protein coding RNA 2093 ncRNA chr11-2624 chr11 9802557 9802767 + 12.8 0.000 intron (NM_030962, intron 32 of 39) intron (NM_030962, intron 32 of 39) -36480 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr6-2689 chr6 25884243 25884453 + 12.8 0.000 Intergenic Intergenic -10105 NM_006632 10786 Hs.327179 NM_006632 ENSG00000124564 SLC17A3 GOUT4|NPT4|UAQTL4 solute carrier family 17 member 3 protein-coding chr12-1889 chr12 57835578 57835788 + 12.8 0.000 intron (NM_005730, intron 1 of 7) intron (NM_005730, intron 1 of 7) -10991 NR_029847 407016 NR_029847 ENSG00000207789 MIR26A2 MIRN26A2|mir-26a-2 microRNA 26a-2 ncRNA chr3-1195 chr3 15327934 15328144 + 12.8 0.000 intron (NM_001018009, intron 2 of 8) MER33|DNA|hAT-Charlie 4547 NM_004844 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr2-1201 chr2 160493037 160493247 + 12.8 0.000 intron (NM_002897, intron 1 of 13) CpG 665 NM_016836 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr19-2041 chr19 3176921 3177131 + 12.8 0.000 Intergenic Intergenic -1743 NM_003775 8698 Hs.662006 NM_003775 ENSG00000125910 S1PR4 EDG6|LPC1|S1P4|SLP4 sphingosine-1-phosphate receptor 4 protein-coding chr11-4747 chr11 96145389 96145599 + 12.8 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -195944 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr2-9037 chr2 198599211 198599421 + 12.8 0.000 Intergenic L1MEg|LINE|L1 -224219 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2-5448 chr2 121735915 121736125 + 12.8 0.000 intron (NM_032390, intron 1 of 6) intron (NM_032390, intron 1 of 6) 855 NM_032390 84365 Hs.367842 NM_032390 ENSG00000155438 NIFK MKI67IP|Nopp34 nucleolar protein interacting with the FHA domain of MKI67 protein-coding chr6-4192 chr6 2913265 2913475 + 12.8 0.000 Intergenic Intergenic -10061 NM_004155 5272 Hs.104879 NM_004155 ENSG00000170542 SERPINB9 CAP-3|CAP3|PI-9|PI9 serpin family B member 9 protein-coding chr1-5435 chr1 37100706 37100916 + 12.8 0.000 Intergenic MER2|DNA|TcMar-Tigger -60752 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr8-1854 chr8 6061906 6062116 + 12.8 0.000 Intergenic MER66B|LTR|ERV1 344537 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr21-200 chr21 43827175 43827385 + 12.8 0.000 Intergenic AluSx4|SINE|Alu -14713 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chr3-1954 chr3 33250839 33251049 + 12.8 0.000 Intergenic L1MC4|LINE|L1 -26081 NR_146121 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding chr8-3079 chr8 22725781 22725991 + 12.8 0.000 intron (NM_001363233, intron 5 of 6) intron (NM_001363233, intron 5 of 6) -32406 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr13-1066 chr13 33229981 33230191 + 12.8 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -24036 NM_001243474 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr1-7266 chr1 232194138 232194348 + 12.8 0.000 Intergenic Intergenic 268409 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr11-2403 chr11 5124241 5124451 + 12.8 0.000 Intergenic Intergenic 8296 NM_001005160 390054 Hs.546593 NM_001005160 ENSG00000171944 OR52A5 OR11-33 olfactory receptor family 52 subfamily A member 5 protein-coding chr9-3532 chr9 35694962 35695172 + 12.8 0.000 Intergenic Charlie1a|DNA|hAT-Charlie -5011 NM_003289 7169 Hs.300772 NM_003289 ENSG00000198467 TPM2 AMCD1|DA1|DA2B|DA2B4|HEL-S-273|NEM4|TMSB tropomyosin 2 protein-coding chr12-1567 chr12 116358946 116359156 + 12.8 0.000 Intergenic Intergenic 69267 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr1-3718 chr1 216464505 216464715 + 12.8 0.000 Intergenic Intergenic -41162 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr12-3045 chr12 4293818 4294028 + 12.8 0.000 intron (NM_001759, intron 4 of 4) intron (NM_001759, intron 4 of 4) -17739 NR_125790 103752584 Hs.577711 NR_125790 ENSG00000255920 CCND2-AS1 CCND2-AS2 CCND2 antisense RNA 1 ncRNA chrX-687 chrX 39816967 39817177 + 12.8 0.000 Intergenic Intergenic -20489 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr22-933 chr22 39205370 39205580 + 12.8 0.000 Intergenic Intergenic 35434 NM_033016 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr1-4752 chr1 8349925 8350135 + 12.8 0.000 Intergenic Intergenic 31945 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr19-1567 chr19 2371611 2371821 + 12.8 0.000 Intergenic AluSx1|SINE|Alu -18055 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr9-2380 chr9 125067377 125067587 + 12.8 0.000 intron (NM_173690, intron 2 of 18) MLT1C|LTR|ERVL-MaLR 76046 NM_001144877 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr5-2954 chr5 157558103 157558313 + 12.8 0.000 intron (NM_033274, intron 3 of 22) intron (NM_033274, intron 3 of 22) 17567 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr11-3002 chr11 122285253 122285463 + 12.8 0.000 intron (NR_137180, intron 2 of 4) intron (NR_137180, intron 2 of 4) 24129 NR_137180 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr21-439 chr21 35658379 35658589 + 12.8 0.000 Intergenic Intergenic -62231 NR_030414 768219 NR_030414 ENSG00000211590 MIR802 MIRN802|hsa-mir-802 microRNA 802 ncRNA chr6-3494 chr6 15628766 15628976 + 12.8 0.000 intron (NR_036448, intron 5 of 9) intron (NR_036448, intron 5 of 9) 34157 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr15-3384 chr15 87957492 87957702 + 12.8 0.000 intron (NM_001320135, intron 12 of 15) intron (NM_001320135, intron 12 of 15) -11329 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr16-1712 chr16 23026058 23026268 + 12.8 0.000 Intergenic Intergenic 123107 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr13-2479 chr13 51494147 51494357 + 12.8 0.000 Intergenic MLT2C1|LTR|ERVL 40907 NR_103812 100507398 Hs.594897 NR_103812 ENSG00000236778 INTS6-AS1 - INTS6 antisense RNA 1 ncRNA chr12-2334 chr12 2925842 2926052 + 12.8 0.000 intron (NM_003324, intron 4 of 10) intron (NM_003324, intron 4 of 10) -33450 NM_003213 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr13-1581 chr13 37955801 37956011 + 12.8 0.000 Intergenic MIRb|SINE|MIR -85481 NM_001135957 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr12-2139 chr12 104286846 104287056 + 12.8 0.000 promoter-TSS (NM_001261446) promoter-TSS (NM_001261446) -81 NM_001261445 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr1-3934 chr1 94843470 94843680 + 12.8 0.000 intron (NM_001258340, intron 8 of 14) intron (NM_001258340, intron 8 of 14) 19082 NM_001350223 126969 Hs.483423 NM_152369 ENSG00000143036 SLC44A3 CTL3 solute carrier family 44 member 3 protein-coding chr3-2371 chr3 170998086 170998296 + 12.8 0.000 intron (NM_001278658, intron 9 of 9) intron (NM_001278658, intron 9 of 9) 28529 NM_001278659 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr6-1374 chr6 80477700 80477910 + 12.8 0.000 Intergenic Intergenic 371134 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding KI270736.1-5 KI270736.1 179722 179932 + 12.8 0.000 NA NA NA NA chr2-3527 chr2 236196259 236196469 + 12.8 0.000 exon (NM_212556, exon 5 of 6) exon (NM_212556, exon 5 of 6) -27978 NM_001485 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr20-1173 chr20 372022 372232 + 12.8 0.000 Intergenic (AAGG)n|Simple_repeat|Simple_repeat -8502 NM_021158 57761 Hs.516826 NM_021158 ENSG00000101255 TRIB3 C20orf97|NIPK|SINK|SKIP3|TRB3 tribbles pseudokinase 3 protein-coding chr11-4984 chr11 71898854 71899064 + 12.8 0.000 intron (NR_029192, intron 6 of 6) intron (NR_029192, intron 6 of 6) 20506 NM_001242853 100129216 Hs.740246 NM_001242853 ENSG00000225805 DEFB131B - defensin beta 131B protein-coding chr6-2250 chr6 52652089 52652299 + 12.8 0.000 Intergenic L1MD2|LINE|L1 -12207 NR_024403 730101 Hs.7921 NR_024403 ENSG00000216775 LOC730101 - uncharacterized LOC730101 ncRNA chr15-3019 chr15 57213816 57214026 + 12.8 0.000 intron (NM_207038, intron 8 of 19) intron (NM_207038, intron 8 of 19) -5509 NM_001306220 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr9-1380 chr9 73038553 73038763 + 12.8 0.000 Intergenic Intergenic -85605 NM_000689 216 Hs.76392 NM_000689 ENSG00000165092 ALDH1A1 ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 aldehyde dehydrogenase 1 family member A1 protein-coding chr12-1799 chr12 127559721 127559931 + 12.8 0.000 Intergenic Intergenic 76641 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LINC02411 - long intergenic non-protein coding RNA 2411 ncRNA chr12-4780 chr12 53413768 53413978 + 12.8 0.000 3' UTR (NM_001251825, exon 6 of 6) 3' UTR (NM_001251825, exon 6 of 6) -9982 NM_001164691 269 Hs.659889 NM_020547 ENSG00000135409 AMHR2 AMHR|MISR2|MISRII|MRII anti-Mullerian hormone receptor type 2 protein-coding chr17-1545 chr17 82362118 82362328 + 12.8 0.000 exon (NM_207459, exon 2 of 2) exon (NM_207459, exon 2 of 2) 2976 NM_207459 400629 Hs.231897 NM_207459 ENSG00000182459 TEX19 - testis expressed 19 protein-coding chr22-1304 chr22 43472910 43473120 + 12.8 0.000 intron (NM_001362786, intron 3 of 6) intron (NM_001362786, intron 3 of 6) -43239 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr13-1122 chr13 24798496 24798706 + 12.8 0.000 intron (NM_031277, intron 11 of 35) MIR|SINE|MIR 34432 NM_001184993 56163 Hs.97464 NM_031277 ENSG00000132972 RNF17 Mmip-2|SPATA23|TDRD4 ring finger protein 17 protein-coding chr19-1266 chr19 9914744 9914954 + 12.8 0.000 intron (NM_058164, intron 1 of 5) intron (NM_058164, intron 1 of 5) -1048 NM_001304347 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chrX-532 chrX 75106665 75106875 + 12.8 0.000 intron (NM_001271696, intron 3 of 15) L1P4|LINE|L1 49513 NM_001271698 22 Hs.370480 NM_004299 ENSG00000131269 ABCB7 ABC7|ASAT|Atm1p|EST140535 ATP binding cassette subfamily B member 7 protein-coding chr1-8663 chr1 207397813 207398023 + 12.8 0.000 Intergenic HAL1ME|LINE|L1 -56382 NM_001006658 1380 Hs.445757 NM_001877 ENSG00000117322 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement C3d receptor 2 protein-coding chr11-2384 chr11 1240492 1240702 + 12.8 0.000 intron (NM_002458, intron 30 of 48) intron (NM_002458, intron 30 of 48) 9079 NR_157183 112577518 NR_157183 MUC5B-AS1 - MUC5B antisense RNA 1 ncRNA chr4-2929 chr4 94409822 94410032 + 12.8 0.000 Intergenic Intergenic -41930 NM_001256425 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr1-4512 chr1 31593962 31594172 + 12.8 0.000 Intergenic Intergenic 15922 NM_001204415 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr3-1968 chr3 112075146 112075356 + 12.8 0.000 intron (NR_026734, intron 13 of 16) intron (NR_026734, intron 13 of 16) -11084 NM_024616 79669 Hs.434247 NM_024616 ENSG00000114529 C3orf52 TTMP chromosome 3 open reading frame 52 protein-coding chr19-1334 chr19 5850801 5851011 + 12.8 0.000 intron (NR_110740, intron 1 of 3) AluJo|SINE|Alu 543 NM_001097640 2525 Hs.169238 NM_000149 ENSG00000171124 FUT3 CD174|FT3B|FucT-III|LE|Les fucosyltransferase 3 (Lewis blood group) protein-coding chr16-1511 chr16 27808284 27808494 + 12.8 0.000 intron (NM_001109763, intron 5 of 6) intron (NM_001109763, intron 5 of 6) 79768 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chrX-811 chrX 71315791 71316001 + 12.8 0.000 Intergenic Intergenic 14146 NM_012278 26548 Hs.109999 NM_012278 ENSG00000147166 ITGB1BP2 CHORDC3|ITGB1BP|MELUSIN|MSTP015 integrin subunit beta 1 binding protein 2 protein-coding chr16-1885 chr16 85113562 85113772 + 12.8 0.000 Intergenic Intergenic -1195 NM_001366920 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr11-2766 chr11 65977624 65977834 + 12.8 0.000 intron (NM_005146, intron 16 of 19) intron (NM_005146, intron 16 of 19) 15995 NM_005146 9092 Hs.502883 NM_005146 ENSG00000175467 SART1 Ara1|HAF|HOMS1|SART1259|SNRNP110|Snu66 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP protein-coding chr1-3541 chr1 217079041 217079251 + 12.8 0.000 promoter-TSS (NM_001350125) promoter-TSS (NM_001350125) -859 NM_001350125 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr7-3025 chr7 83622963 83623173 + 12.8 0.000 intron (NM_012431, intron 1 of 16) intron (NM_012431, intron 1 of 16) 18363 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr6-2028 chr6 52815622 52815832 + 12.8 0.000 Intergenic Intergenic -11911 NM_145740 2938 Hs.446309 NM_145740 ENSG00000243955 GSTA1 GST-epsilon|GST2|GSTA1-1|GTH1 glutathione S-transferase alpha 1 protein-coding chr6-1320 chr6 13328539 13328749 + 12.8 0.000 promoter-TSS (NM_001143966) promoter-TSS (NM_001143966) -61 NM_001318809 107080638 Hs.484678 NM_001318809 ENSG00000145979 TBC1D7-LOC100130357 - TBC1D7-LOC100130357 readthrough protein-coding chr12-1506 chr12 50720241 50720451 + 12.8 0.000 intron (NM_173602, intron 25 of 37) intron (NM_173602, intron 25 of 37) -43755 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr6-1772 chr6 78605966 78606176 + 12.8 0.000 Intergenic L2|LINE|L2 -66762 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr9-3554 chr9 41233001 41233211 + 12.8 0.000 promoter-TSS (NR_039688).2 promoter-TSS (NR_039688).2 -649 NR_039688 100616184 NR_039688 ENSG00000276029 MIR4477A - microRNA 4477a ncRNA chr1-4290 chr1 19138312 19138522 + 12.8 0.000 intron (NM_020765, intron 59 of 105) intron (NM_020765, intron 59 of 105) 71849 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr15-1022 chr15 87365247 87365457 + 12.8 0.000 Intergenic Intergenic -211577 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr8-1510 chr8 68584928 68585138 + 12.8 0.000 intron (NR_146186, intron 7 of 12) intron (NR_146186, intron 7 of 12) -253542 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr7-2134 chr7 36048197 36048407 + 12.8 0.000 Intergenic Intergenic -47008 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr6-2447 chr6 7058386 7058596 + 12.8 0.000 Intergenic Intergenic -49252 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chrX-2013 chrX 15215501 15215711 + 12.8 0.000 Intergenic Intergenic 54477 NM_001031739 140462 Hs.19404 NM_024087 ENSG00000102048 ASB9 - ankyrin repeat and SOCS box containing 9 protein-coding chr14-1518 chr14 53980252 53980462 + 12.8 0.000 Intergenic Intergenic -23466 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr6-1390 chr6 111423245 111423455 + 12.8 0.000 intron (NM_002912, intron 2 of 32) L2c|LINE|L2 -60122 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr6-2521 chr6 357779 357989 + 12.8 0.000 Intergenic MIR|SINE|MIR -33868 NR_046000 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr2-5487 chr2 136075776 136075986 + 12.8 0.000 Intergenic HERVK3-int|LTR|ERVK 40354 NM_001008540 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr16-1912 chr16 89121129 89121339 + 12.8 0.000 intron (NR_104293, intron 7 of 10) intron (NR_104293, intron 7 of 10) -15314 NR_045667 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr10-2295 chr10 24272329 24272539 + 12.8 0.000 intron (NM_019590, intron 2 of 20) MIR3|SINE|MIR -3251 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr2-3362 chr2 238580495 238580705 + 12.8 0.000 Intergenic Intergenic -25101 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr19-2786 chr19 46329171 46329381 + 12.8 0.000 exon (NM_152794, exon 12 of 15) exon (NM_152794, exon 12 of 15) -17811 NM_001204284 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr6-1715 chr6 33744542 33744752 + 12.8 0.000 intron (NM_001142883, intron 1 of 6) intron (NM_001142883, intron 1 of 6) 2258 NM_054111 117283 Hs.17253 NM_054111 ENSG00000161896 IP6K3 IHPK3|INSP6K3 inositol hexakisphosphate kinase 3 protein-coding chr8-841 chr8 131816533 131816743 + 12.8 0.000 Intergenic Intergenic -87455 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr8-1188 chr8 48151234 48151444 + 12.8 0.000 Intergenic MER44D|DNA|TcMar-Tigger 142908 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr21-134 chr21 36385378 36385588 + 12.8 0.000 promoter-TSS (NM_005441) promoter-TSS (NM_005441) 91 NM_005441 8208 Hs.75238 NM_005441 ENSG00000159259 CHAF1B CAF-1|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7|MPP7 chromatin assembly factor 1 subunit B protein-coding chr1-2371 chr1 79441039 79441249 + 12.8 0.000 Intergenic MER20|DNA|hAT-Charlie -434414 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr2-1005 chr2 219642496 219642706 + 12.8 0.000 TTS (NM_201574) TTS (NM_201574) 14971 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr7-1260 chr7 47991761 47991971 + 12.8 0.000 intron (NM_001030019, intron 8 of 9) intron (NM_001030019, intron 8 of 9) -12251 NM_004507 3364 Hs.152983 NM_004507 ENSG00000136273 HUS1 hHUS1 HUS1 checkpoint clamp component protein-coding chr4-1609 chr4 52588708 52588918 + 12.8 0.000 Intergenic Intergenic 67726 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding chr1-10043 chr1 89911926 89912136 + 12.8 0.000 intron (NM_001134479, intron 2 of 2) L2|LINE|L2 82935 NR_002830 492303 Hs.550796 NR_002830 GEMIN8P4 - gem nuclear organelle associated protein 8 pseudogene 4 pseudo chrX-1054 chrX 119552546 119552756 + 12.8 0.000 intron (NM_022101, intron 2 of 6) MER21A|LTR|ERVL 12758 NM_001170569 63932 Hs.248572 NM_022101 ENSG00000018610 CXorf56 MRX107 chromosome X open reading frame 56 protein-coding chr1-3522 chr1 200368173 200368383 + 12.8 0.000 intron (NR_040064, intron 4 of 4) MIR|SINE|MIR 5514 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr10-2924 chr10 3714647 3714857 + 12.8 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 70457 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr19-3649 chr19 3277468 3277678 + 12.8 0.000 intron (NR_033342, intron 4 of 12) L1MB7|LINE|L1 52295 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr9-1382 chr9 77914173 77914383 + 12.8 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 117533 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr18-488 chr18 8461623 8461833 + 12.8 0.000 Intergenic Intergenic -94694 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr1-4470 chr1 9383179 9383389 + 12.8 0.000 Intergenic Intergenic 45632 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr3-3112 chr3 146156146 146156356 + 12.8 0.000 intron (NM_182943, intron 1 of 19) intron (NM_182943, intron 1 of 19) 4933 NM_182943 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr1-7244 chr1 226733064 226733274 + 12.8 0.000 intron (NM_002221, intron 2 of 7) (AAGTGTGAGC)n|Simple_repeat|Simple_repeat 6006 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr7-1014 chr7 2701861 2702071 + 12.8 0.000 intron (NM_133463, intron 2 of 6) MER5A1|DNA|hAT-Charlie 13764 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr1-3452 chr1 27628324 27628534 + 12.8 0.000 intron (NM_005248, intron 1 of 12) intron (NM_005248, intron 1 of 12) -1832 NM_001042729 2268 Hs.1422 NM_005248 ENSG00000000938 FGR SRC2|c-fgr|c-src2|p55-Fgr|p55c-fgr|p58-Fgr|p58c-fgr FGR proto-oncogene, Src family tyrosine kinase protein-coding chr12-2988 chr12 118302194 118302404 + 12.8 0.000 intron (NM_001346490, intron 1 of 21) intron (NM_001346490, intron 1 of 21) 57406 NM_001346489 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr4-6353 chr4 100984951 100985161 + 12.8 0.000 Intergenic L1MC5|LINE|L1 255816 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr2-2637 chr2 113541438 113541648 + 12.8 0.000 promoter-TSS (NR_146439) promoter-TSS (NR_146439) 72 NR_146439 729468 NR_146438 PGM5P4 - phosphoglucomutase 5 pseudogene 4 pseudo chr1-5198 chr1 177937939 177938149 + 12.8 0.000 intron (NM_033127, intron 18 of 25) MER49|LTR|ERV1 31878 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr2-7798 chr2 43871523 43871733 + 12.8 0.000 intron (NM_001357321, intron 6 of 12) intron (NM_001357321, intron 6 of 12) 32657 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr10-2596 chr10 74500966 74501176 + 12.8 0.000 intron (NM_001369124, intron 6 of 9) intron (NM_001369124, intron 6 of 9) 28253 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr18-298 chr18 70384612 70384822 + 12.8 0.000 promoter-TSS (NR_110764) promoter-TSS (NR_110764) -126 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LINC01910 - long intergenic non-protein coding RNA 1910 ncRNA chr6-2049 chr6 87285908 87286118 + 12.8 0.000 intron (NM_198568, intron 2 of 2) L2|LINE|L2 -36575 NM_001287445 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr17-3578 chr17 80445745 80445955 + 12.8 0.000 Intergenic Intergenic 26432 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr5-830 chr5 34622097 34622307 + 12.8 0.000 Intergenic Intergenic -34126 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr7-2654 chr7 3922439 3922649 + 12.8 0.000 intron (NM_152744, intron 5 of 44) intron (NM_152744, intron 5 of 44) -207141 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr6-3640 chr6 132259102 132259312 + 12.8 0.000 Intergenic Intergenic 125229 NR_038981 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr6-869 chr6 44055017 44055227 + 12.8 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 19530 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr9-2696 chr9 81318603 81318813 + 12.8 0.000 Intergenic Intergenic 370827 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr2-1455 chr2 18373961 18374171 + 12.8 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 186587 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr3-3821 chr3 23963530 23963740 + 12.8 0.000 intron (NR_110524, intron 6 of 8) AluSz|SINE|Alu 17514 NM_001145425 9975 Hs.37288 NM_005126 ENSG00000174738 NR1D2 BD73|EAR-1R|REVERBB|REVERBbeta|RVR nuclear receptor subfamily 1 group D member 2 protein-coding chr2-3474 chr2 172877855 172878065 + 12.8 0.000 intron (NM_001282899, intron 1 of 27) intron (NM_001282899, intron 1 of 27) 17922 NM_001282900 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr15-353 chr15 40050698 40050908 + 12.8 0.000 intron (NR_040060, intron 2 of 2) (TG)n|Simple_repeat|Simple_repeat 11492 NR_040062 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr4-1616 chr4 61934709 61934919 + 12.8 0.000 intron (NM_001322246, intron 12 of 25) intron (NM_001322246, intron 12 of 25) 226951 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr2-3985 chr2 82939753 82939963 + 12.8 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 83055 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr11-4405 chr11 82623879 82624089 + 12.8 0.000 Intergenic Intergenic 109880 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr12-1813 chr12 6932748 6932958 + 12.8 0.000 intron (NM_001940, intron 1 of 9) intron (NM_001940, intron 1 of 9) 4894 NM_001940 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr16-1797 chr16 4551949 4552159 + 12.8 0.000 Intergenic L1PA8|LINE|L1 -4436 NM_001145011 342346 Hs.684212 NM_001145011 ENSG00000205832 C16orf96 - chromosome 16 open reading frame 96 protein-coding chr18-851 chr18 24660040 24660250 + 12.8 0.000 intron (NR_040033, intron 2 of 2) intron (NR_040033, intron 2 of 2) 31963 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr4-1220 chr4 147570720 147570930 + 12.8 0.000 Intergenic Intergenic -46572 NM_018241 55751 Hs.203896 NM_018241 ENSG00000164168 TMEM184C TMEM34 transmembrane protein 184C protein-coding chr9-1672 chr9 41643630 41643840 + 12.8 0.000 Intergenic SST1|Satellite|centr -3939 NR_103714 100289124 Hs.567050 NM_001024608 FAM27E2 FAM27E1 family with sequence similarity 27 member E2 ncRNA chr11-5149 chr11 2342109 2342319 + 12.8 0.000 intron (NR_108080, intron 1 of 2) LTR10E|LTR|ERV1 -33963 NM_001297649 975 Hs.54457 NM_004356 ENSG00000110651 CD81 CVID6|S5.7|TAPA1|TSPAN28 CD81 molecule protein-coding chr19-4195 chr19 44184584 44184794 + 12.8 0.000 Intergenic ERVL-E-int|LTR|ERVL 19525 NM_001032372 7769 Hs.145956 NM_015919 ENSG00000167380 ZNF226 - zinc finger protein 226 protein-coding chr11-3046 chr11 6646249 6646459 + 12.8 0.000 intron (NM_003737, intron 1 of 20) intron (NM_003737, intron 1 of 20) 9455 NM_003737 8642 Hs.199850 NM_003737 ENSG00000166341 DCHS1 CDH19|CDH25|CDHR6|FIB1|MVP2|PCDH16|VMLDS1 dachsous cadherin-related 1 protein-coding chr1-4864 chr1 30976267 30976477 + 12.8 0.000 intron (NM_001020658, intron 9 of 21) intron (NM_001020658, intron 9 of 21) -8135 NR_003066 692200 NR_003066 SNORD103C HBII-251|SNORD85 small nucleolar RNA, C/D box 103C snoRNA chr17-1277 chr17 76716056 76716266 + 12.8 0.000 3' UTR (NM_001081461, exon 7 of 7) 3' UTR (NM_001081461, exon 7 of 7) -5196 NM_001008529 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr20-2202 chr20 55117569 55117779 + 12.8 0.000 Intergenic LTR2B|LTR|ERV1 -305369 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA chr10-1385 chr10 43816780 43816990 + 12.8 0.000 Intergenic Intergenic -26468 NR_002726 10151 Hs.632956 NR_002726 HNRNPA3P1 D10S102|FBRNP|HNRPA3|HNRPA3P1 heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 pseudo chr6-2247 chr6 51956459 51956669 + 12.8 0.000 intron (NM_138694, intron 36 of 66) L2a|LINE|L2 131049 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding chr7-2052 chr7 121083166 121083376 + 12.8 0.000 intron (NM_001105533, intron 4 of 17) intron (NM_001105533, intron 4 of 17) 93880 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr9-2308 chr9 136742972 136743182 + 12.8 0.000 promoter-TSS (NM_001368089) promoter-TSS (NM_001368089) -137 NM_001001712 414332 Hs.98132 NM_001001712 ENSG00000187922 LCN10 - lipocalin 10 protein-coding chr22-792 chr22 49953610 49953820 + 12.8 0.000 Intergenic Intergenic -7057 NM_001001852 415116 Hs.530381 NM_001001852 ENSG00000198355 PIM3 pim-3 Pim-3 proto-oncogene, serine/threonine kinase protein-coding chr15-1067 chr15 85415798 85416008 + 12.8 0.000 intron (NM_007200, intron 1 of 36) intron (NM_007200, intron 1 of 36) 35300 NM_007200 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr1-3632 chr1 52059300 52059510 + 12.8 0.000 intron (NM_001136497, intron 1 of 4) intron (NM_001136497, intron 1 of 4) 3110 NM_152265 91408 Hs.429839 NM_152265 ENSG00000134717 BTF3L4 - basic transcription factor 3 like 4 protein-coding chr1-3323 chr1 19429118 19429328 + 12.8 0.000 intron (NM_001206540, intron 1 of 9) Tigger15a|DNA|TcMar-Tigger 55072 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr16-2920 chr16 1692023 1692233 + 12.8 0.000 intron (NM_144570, intron 3 of 4) intron (NM_144570, intron 3 of 4) 13849 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 JPT2 C16orf34|HN1L|L11 Jupiter microtubule associated homolog 2 protein-coding chr2-6376 chr2 110723651 110723861 + 12.8 0.000 Intergenic L1MC5a|LINE|L1 -8817 NM_001142807 55289 Hs.253320 NM_018308 ENSG00000153093 ACOXL - acyl-CoA oxidase like protein-coding GL000216.2-7 GL000216.2 141001 141211 + 12.8 0.000 NA NA NA NA chr4-2796 chr4 26620018 26620228 + 12.8 0.000 intron (NM_018317, intron 3 of 20) L2a|LINE|L2 36039 NM_018317 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr1-1195 chr1 55064927 55065137 + 12.8 0.000 TTS (NR_110451) TTS (NR_110451) 24810 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr6-4833 chr6 83509499 83509709 + 12.8 0.000 Intergenic Intergenic -2930 NM_153362 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr1-1600 chr1 54548158 54548368 + 12.8 0.000 promoter-TSS (NM_147161) promoter-TSS (NM_147161) 35 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr18-684 chr18 76417067 76417277 + 12.8 0.000 intron (NM_014643, intron 3 of 6) intron (NM_014643, intron 3 of 6) -74480 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr4-1994 chr4 903395 903605 + 12.8 0.000 intron (NM_005255, intron 5 of 27) intron (NM_005255, intron 5 of 27) 28816 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr13-565 chr13 32587386 32587596 + 12.8 0.000 intron (NM_015032, intron 1 of 34) CpG 1039 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr1-5357 chr1 235246289 235246499 + 12.8 0.000 intron (NR_135074, intron 7 of 24) intron (NR_135074, intron 7 of 24) -56278 NR_039908 100616224 NR_039908 ENSG00000263439 MIR4753 mir-4753 microRNA 4753 ncRNA chr17-4731 chr17 35242272 35242482 + 12.8 0.000 promoter-TSS (NM_001330183) promoter-TSS (NM_001330183) -695 NM_001330183 162394 Hs.585792 NM_144975 ENSG00000166750 SLFN5 - schlafen family member 5 protein-coding chr20-705 chr20 32846755 32846965 + 12.8 0.000 intron (NM_012325, intron 6 of 6) intron (NM_012325, intron 6 of 6) -12063 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr5-4029 chr5 35861774 35861984 + 12.8 0.000 intron (NR_120485, intron 2 of 5) intron (NR_120485, intron 2 of 5) 4988 NM_002185 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr3-782 chr3 51706813 51707023 + 12.8 0.000 promoter-TSS (NM_001349117) promoter-TSS (NM_001349117) -150 NM_001349117 2912 Hs.121510 NM_000839 ENSG00000164082 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate metabotropic receptor 2 protein-coding chr2-3120 chr2 160411357 160411567 + 12.8 0.000 intron (NM_002897, intron 1 of 13) MLT1M|LTR|ERVL-MaLR -3580 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr16-1586 chr16 1282463 1282673 + 12.8 0.000 Intergenic Intergenic 26499 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr10-5035 chr10 35127485 35127695 + 12.8 0.000 intron (NM_183060, intron 1 of 5) CpG 133 NM_183060 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr1-3453 chr1 28928126 28928336 + 12.8 0.000 intron (NM_001166006, intron 1 of 14) intron (NM_001166006, intron 1 of 14) 13655 NM_001166006 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr7-1123 chr7 1020099 1020309 + 12.8 0.000 intron (NR_146964, intron 1 of 4) CpG 2822 NR_029898 442907 NR_029898 ENSG00000199023 MIR339 MIRN339|hsa-mir-339|mir-339 microRNA 339 ncRNA chr1-3742 chr1 876570 876780 + 12.8 0.000 intron (NR_027055, intron 1 of 2) intron (NR_027055, intron 1 of 2) 127 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr1-3190 chr1 113041789 113041999 + 12.8 0.000 intron (NR_103777, intron 2 of 2) intron (NR_103777, intron 2 of 2) 31208 NR_103777 100996251 Hs.382067 NR_103777 ENSG00000238198 LRIG2-DT - LRIG2 divergent transcript ncRNA chr2-3994 chr2 86566589 86566799 + 12.8 0.000 intron (NM_001198954, intron 3 of 7) intron (NM_001198954, intron 3 of 7) -3251 NM_001005753 51652 Hs.591582 NM_016079 ENSG00000115561 CHMP3 CGI-149|NEDF|VPS24 charged multivesicular body protein 3 protein-coding chr20-1292 chr20 51966412 51966622 + 12.8 0.000 Intergenic Intergenic -103604 NR_110016 101927678 Hs.683840 NR_110016 ENSG00000227964 LINC01429 - long intergenic non-protein coding RNA 1429 ncRNA chr6-2014 chr6 37312262 37312472 + 12.8 0.000 intron (NR_130108, intron 8 of 12) intron (NR_130108, intron 8 of 12) -41616 NM_003958 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr1-3024 chr1 1031326 1031536 + 12.8 0.000 intron (NM_198576, intron 2 of 35) intron (NM_198576, intron 2 of 35) -2562 NM_001364727 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr3-3702 chr3 170180715 170180925 + 12.8 0.000 intron (NM_024947, intron 1 of 14) intron (NM_024947, intron 1 of 14) 913 NM_001308116 80012 Hs.529592 NM_024947 ENSG00000173889 PHC3 EDR3|HPH3 polyhomeotic homolog 3 protein-coding chr17-2169 chr17 50146673 50146883 + 12.8 0.000 intron (NM_032595, intron 1 of 9) intron (NM_032595, intron 1 of 9) 3899 NM_032595 84687 Hs.514323 NM_032595 ENSG00000108819 PPP1R9B PPP1R6|PPP1R9|SPINO|Spn protein phosphatase 1 regulatory subunit 9B protein-coding chr5-1657 chr5 14238060 14238270 + 12.8 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 94823 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr2-7086 chr2 171652580 171652790 + 12.8 0.000 Intergenic L1MA3|LINE|L1 -34784 NM_001271790 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr15-1392 chr15 39944812 39945022 + 12.8 0.000 intron (NM_001013703, intron 3 of 38) intron (NM_001013703, intron 3 of 38) 10802 NM_001013703 440275 Hs.656673 NM_001013703 ENSG00000128829 EIF2AK4 GCN2|PVOD2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding chr10-2000 chr10 58044215 58044425 + 12.8 0.000 Intergenic Intergenic 223574 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr4-3217 chr4 39588055 39588265 + 12.8 0.000 intron (NR_047679, intron 3 of 4) MLT1G3|LTR|ERVL-MaLR 38961 NM_001317897 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr18-651 chr18 40904350 40904560 + 12.8 0.000 Intergenic Intergenic 616222 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr6-1432 chr6 153092681 153092891 + 12.8 0.000 intron (NM_012419, intron 1 of 4) intron (NM_012419, intron 1 of 4) 38496 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr7-1914 chr7 2254690 2254900 + 12.8 0.000 3' UTR (NM_013321, exon 11 of 11) 3' UTR (NM_013321, exon 11 of 11) 2782 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr12-1750 chr12 64042954 64043164 + 12.8 0.000 intron (NM_001346201, intron 5 of 21) intron (NM_001346201, intron 5 of 21) 179237 NM_152440 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chrX-781 chrX 44827990 44828200 + 12.8 0.000 Intergenic Intergenic -15926 NM_022076 63904 Hs.534478 NM_022076 ENSG00000189037 DUSP21 LMWDSP21 dual specificity phosphatase 21 protein-coding chr5-2575 chr5 55152136 55152346 + 12.8 0.000 intron (NM_001145734, intron 2 of 10) MLT1D|LTR|ERVL-MaLR -7930 NM_001008397 493869 Hs.289044 NM_001008397 ENSG00000164294 GPX8 EPLA847|GPx-8|GSHPx-8|UNQ847 glutathione peroxidase 8 (putative) protein-coding chr1-3082 chr1 26493543 26493753 + 12.8 0.000 Intergenic HAL1|LINE|L1 21208 NM_005517 3151 Hs.181163 NM_005517 ENSG00000198830 HMGN2 HMG17 high mobility group nucleosomal binding domain 2 protein-coding chrX-968 chrX 122238889 122239099 + 12.8 0.000 Intergenic MER61D|LTR|ERV1 868022 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr6-2919 chr6 19731388 19731598 + 12.8 0.000 intron (NR_134651, intron 3 of 3) MER44C|DNA|TcMar-Tigger 73266 NR_134651 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr6-1110 chr6 116545514 116545724 + 12.8 0.000 promoter-TSS (NM_001139444) promoter-TSS (NM_001139444) 65 NM_001139444 100128327 Hs.134795 NM_001139444 ENSG00000173626 TRAPPC3L BET3L|bA259P20.2 trafficking protein particle complex 3 like protein-coding chr10-734 chr10 43606444 43606654 + 12.8 0.000 5' UTR (NM_001318140, exon 1 of 5) 5' UTR (NM_001318140, exon 1 of 5) 111 NM_145312 220992 Hs.147440 NM_145312 ENSG00000198298 ZNF485 - zinc finger protein 485 protein-coding chr16-1255 chr16 13957882 13958092 + 12.8 0.000 Intergenic Intergenic 37830 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr13-1180 chr13 41452690 41452900 + 12.8 0.000 Intergenic SATR2|Satellite|Satellite -4755 NM_014059 28984 Hs.507866 NM_014059 ENSG00000102760 RGCC C13orf15|RGC-32|RGC32|bA157L14.2 regulator of cell cycle protein-coding chr13-1068 chr13 33751321 33751531 + 12.8 0.000 Intergenic Intergenic -66643 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr2-1931 chr2 207115758 207115968 + 12.8 0.000 intron (NR_073108, intron 3 of 4) intron (NR_073108, intron 3 of 4) -5790 NR_036227 100423036 NR_036227 ENSG00000253008 MIR2355 mir-2355 microRNA 2355 ncRNA chr14-2012 chr14 57979467 57979677 + 12.8 0.000 Intergenic LTR16E2|LTR|ERVL -113480 NM_001306087 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr13-1228 chr13 80116169 80116379 + 12.8 0.000 Intergenic Intergenic 105197 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr12-1455 chr12 124927146 124927356 + 12.8 0.000 Intergenic Intergenic 11704 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr19-903 chr19 46745793 46746003 + 12.8 0.000 promoter-TSS (NM_024301) promoter-TSS (NM_024301) -159 NM_001039885 79147 Hs.515493 NM_024301 ENSG00000181027 FKRP LGMD2I|LGMDR9|MDC1C|MDDGA5|MDDGB5|MDDGC5 fukutin related protein protein-coding chr4-1019 chr4 7282099 7282309 + 12.8 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -28246 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr2-2775 chr2 235327950 235328160 + 12.8 0.000 Intergenic AluSc|SINE|Alu -165988 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr7-2482 chr7 5131222 5131432 + 12.8 0.000 intron (NR_034163, intron 3 of 5) intron (NR_034163, intron 3 of 5) 13219 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr5-2211 chr5 174736485 174736695 + 12.8 0.000 Intergenic MIRb|SINE|MIR 12008 NM_001363626 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr1-2470 chr1 85521489 85521699 + 12.8 0.000 intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) -56435 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr1-5321 chr1 225460916 225461126 + 12.8 0.000 Intergenic Intergenic -32166 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr9-3993 chr9 19114370 19114580 + 12.8 0.000 Intergenic AluSx|SINE|Alu -11571 NM_017645 54801 Hs.533468 NM_017645 ENSG00000147874 HAUS6 Dgt6|FAM29A HAUS augmin like complex subunit 6 protein-coding chr15-3048 chr15 60255532 60255742 + 12.8 0.000 Intergenic Intergenic 142349 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr7-2038 chr7 95199868 95200078 + 12.8 0.000 intron (NM_017650, intron 6 of 15) intron (NM_017650, intron 6 of 15) 124559 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr10-3033 chr10 115635350 115635560 + 12.8 0.000 intron (NM_207303, intron 26 of 28) L1ME3A|LINE|L1 542090 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr16-2348 chr16 52872703 52872913 + 12.8 0.000 Intergenic Intergenic 180065 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr9-2743 chr9 97516641 97516851 + 12.8 0.000 intron (NM_003275, intron 1 of 9) L1MB3|LINE|L1 15080 NM_003275 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr1-3917 chr1 84698379 84698589 + 12.8 0.000 Intergenic Intergenic -8016 NM_001166295 117178 Hs.22587 NM_014021 ENSG00000117155 SSX2IP ADIP|hMsd1 SSX family member 2 interacting protein protein-coding chr9-1126 chr9 107637736 107637946 + 12.8 0.000 Intergenic CpG -148072 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chrX-512 chrX 131729481 131729691 + 12.8 0.000 intron (NR_026975, intron 10 of 12) intron (NR_026975, intron 10 of 12) 101057 NR_152876 286467 Hs.720385 NR_026975 ENSG00000213468 FIRRE LINC01200 firre intergenic repeating RNA element ncRNA chr19-2145 chr19 4694663 4694873 + 12.8 0.000 non-coding (NR_158699, exon 13 of 23) non-coding (NR_158699, exon 13 of 23) 15486 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr17-4676 chr17 21460068 21460278 + 12.8 0.000 Intergenic Intergenic 83816 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr17-1301 chr17 50037843 50038053 + 12.8 0.000 Intergenic Intergenic 17791 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 PICART1 - p53 inducible cancer associated RNA transcript 1 ncRNA chr3-2682 chr3 49610820 49611030 + 12.8 0.000 intron (NM_003458, intron 1 of 11) intron (NM_003458, intron 1 of 11) 56448 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr6-1288 chr6 130418058 130418268 + 12.8 0.000 intron (NM_001258277, intron 2 of 2) intron (NM_001258277, intron 2 of 2) -2933 NM_001258278 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr2-4662 chr2 198615886 198616096 + 12.8 0.000 Intergenic Intergenic -240894 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr19-1818 chr19 2357242 2357452 + 12.8 0.000 Intergenic (ATCC)n|Simple_repeat|Simple_repeat 28663 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr5-3080 chr5 37615314 37615524 + 12.8 0.000 intron (NM_001345998, intron 10 of 17) intron (NM_001345998, intron 10 of 17) 219403 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr4-1355 chr4 2828693 2828903 + 12.8 0.000 intron (NM_001145856, intron 7 of 12) intron (NM_001145856, intron 7 of 12) 9984 NM_003023 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr12-3850 chr12 100427170 100427380 + 12.8 0.000 Intergenic L2-3_Crp|LINE|L2 -46591 NM_001206978 9971 Hs.282735 NM_005123 ENSG00000012504 NR1H4 BAR|FXR|HRR-1|HRR1|PFIC5|RIP14 nuclear receptor subfamily 1 group H member 4 protein-coding chr3-2133 chr3 100650908 100651118 + 12.8 0.000 intron (NM_001308362, intron 5 of 9) L1MC4|LINE|L1 15475 NM_001308362 84873 Hs.334511 NM_032787 ENSG00000144820 ADGRG7 GPR128 adhesion G protein-coupled receptor G7 protein-coding chrX-305 chrX 21940485 21940695 + 12.8 0.000 promoter-TSS (NM_001258423) promoter-TSS (NM_001258423) 17 NM_001258423 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr7-618 chr7 129054498 129054708 + 12.8 0.000 promoter-TSS (NR_002187) promoter-TSS (NR_002187) 570 NR_034053 23534 Hs.193613 NM_012470 ENSG00000064419 TNPO3 IPO12|LGMD1F|LGMDD2|MTR10A|TRN-SR|TRN-SR2|TRNSR transportin 3 protein-coding chr22-1043 chr22 39474614 39474824 + 12.8 0.000 intron (NM_002409, intron 1 of 1) MamTip2|DNA|hAT-Tip100 2103 NR_126469 104502417 Hs.586031 NR_126469 ENSG00000227188 MGAT3-AS1 TapSAKI MGAT3 antisense RNA 1 ncRNA chr3-1603 chr3 194315611 194315821 + 12.8 0.000 Intergenic CpG -2912 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr20-1129 chr20 34386230 34386440 + 12.8 0.000 intron (NM_001257137, intron 2 of 25) intron (NM_001257137, intron 2 of 25) 23062 NM_031483 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr14-895 chr14 44961114 44961324 + 12.8 0.000 promoter-TSS (NM_015091) promoter-TSS (NM_015091) 266 NM_001308112 54813 Hs.550906 NM_017658 ENSG00000179454 KLHL28 BTBD5 kelch like family member 28 protein-coding chr16-1051 chr16 88803743 88803953 + 12.8 0.000 promoter-TSS (NM_030928) promoter-TSS (NM_030928) 59 NM_030928 81620 Hs.122908 NM_030928 ENSG00000167513 CDT1 DUP|RIS2 chromatin licensing and DNA replication factor 1 protein-coding chr15-1923 chr15 84731878 84732088 + 12.8 0.000 Intergenic Intergenic -15523 NM_001271921 23478 Hs.9534 NM_014300 ENSG00000140612 SEC11A 1810012E07Rik|SEC11L1|SPC18|SPCS4A|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding chr20-1254 chr20 38144291 38144501 + 12.8 0.000 intron (NM_198951, intron 6 of 9) intron (NM_198951, intron 6 of 9) 20874 NM_198951 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr11-1620 chr11 64789221 64789431 + 12.8 0.000 3' UTR (NM_004579, exon 32 of 32) 3' UTR (NM_004579, exon 32 of 32) -10482 NM_201997 7536 Hs.502829 NM_004630 ENSG00000168066 SF1 BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162 splicing factor 1 protein-coding chr12-1587 chr12 1657507 1657717 + 12.8 0.000 Intergenic AluJr|SINE|Alu 2768 NR_037422 100500816 NR_037422 ENSG00000266043 MIR3649 - microRNA 3649 ncRNA chr1-5632 chr1 21811980 21812190 + 12.8 0.000 promoter-TSS (NM_001013693) promoter-TSS (NM_001013693) -180 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr3-1556 chr3 9555918 9556128 + 12.8 0.000 Intergenic Intergenic -2201 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr17-3422 chr17 14966981 14967191 + 12.8 0.000 Intergenic MER50|LTR|ERV1 -47719 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr16-1286 chr16 75080454 75080664 + 12.8 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 36213 NM_194436 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr6-1728 chr6 37110478 37110688 + 12.8 0.000 Intergenic Intergenic -59569 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr14-916 chr14 89417913 89418123 + 12.8 0.000 promoter-TSS (NM_005197) promoter-TSS (NM_005197) 664 NR_036500 400236 Hs.585207 NR_036500 ENSG00000258920 FOXN3-AS1 - FOXN3 antisense RNA 1 ncRNA chrX-824 chrX 101208221 101208431 + 12.8 0.000 Intergenic Intergenic -11618 NM_001939 1821 Hs.159291 NM_001939 ENSG00000102385 DRP2 DRP-2 dystrophin related protein 2 protein-coding chr18-1557 chr18 26415164 26415374 + 12.8 0.000 Intergenic L2c|LINE|L2 -7726 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr5-1344 chr5 176968991 176969201 + 12.8 0.000 non-coding (NR_146149, exon 6 of 16) non-coding (NR_146149, exon 6 of 16) 37346 NM_016290 51720 Hs.232721 NM_016290 ENSG00000087206 UIMC1 RAP80|X2HRIP110 ubiquitin interaction motif containing 1 protein-coding chr2-2259 chr2 239954392 239954602 + 12.8 0.000 intron (NR_136158, intron 7 of 10) intron (NR_136158, intron 7 of 10) -11403 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr9-1869 chr9 81493189 81493399 + 12.8 0.000 Intergenic Intergenic 196241 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr2-2355 chr2 216911965 216912175 + 12.8 0.000 Intergenic Intergenic 41298 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr2-2448 chr2 69973333 69973543 + 12.8 0.000 intron (NR_033872, intron 9 of 10) AluJr4|SINE|Alu -11173 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase retroviral like 1 protein-coding chr1-7070 chr1 184284079 184284289 + 12.8 0.000 Intergenic Intergenic -102845 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr17-2967 chr17 64260093 64260303 + 12.8 0.000 intron (NM_018469, intron 1 of 11) intron (NM_018469, intron 1 of 11) 3062 NM_001288732 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr16-2752 chr16 2465542 2465752 + 12.8 0.000 TTS (NM_025108) TTS (NM_025108) 1680 NR_106826 102465460 NR_106826 ENSG00000274805 MIR6768 hsa-mir-6768 microRNA 6768 ncRNA chr10-2534 chr10 57692353 57692563 + 12.8 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -387899 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr4-1427 chr4 56858213 56858423 + 12.8 0.000 Intergenic AluJo|SINE|Alu -36449 NM_021114 6691 Hs.98243 NM_021114 ENSG00000128040 SPINK2 HUSI-II|SPGF29 serine peptidase inhibitor, Kazal type 2 protein-coding chr8-1133 chr8 125602612 125602822 + 12.8 0.000 Intergenic MIR3|SINE|MIR 170508 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr11-2296 chr11 45302623 45302833 + 12.8 0.000 Intergenic MER51A|LTR|ERV1 -16387 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr10-1826 chr10 5679694 5679904 + 12.8 0.000 Intergenic L2|LINE|L2 -5039 NM_001321784 54906 Hs.610717 NM_017782 ENSG00000108021 TASOR2 C10orf18|FAM208B|bA318E3.2 transcription activation suppressor family member 2 protein-coding chr11-4481 chr11 108635154 108635364 + 12.8 0.000 Intergenic Intergenic -29810 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr1-1616 chr1 112674944 112675154 + 12.8 0.000 exon (NM_001369507, exon 1 of 20) exon (NM_001369507, exon 1 of 20) 311 NM_001369507 4343 Hs.514941 NM_020963 ENSG00000155363 MOV10 fSAP113|gb110 Mov10 RISC complex RNA helicase protein-coding chr11-1558 chr11 65003417 65003627 + 12.8 0.000 Intergenic Intergenic -6551 NM_138456 116071 Hs.124840 NM_138456 ENSG00000168062 BATF2 SARI basic leucine zipper ATF-like transcription factor 2 protein-coding chr3-3020 chr3 111151586 111151796 + 12.8 0.000 intron (NM_001243288, intron 7 of 8) intron (NM_001243288, intron 7 of 8) 79875 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr9-1391 chr9 94675493 94675703 + 12.8 0.000 Intergenic Intergenic -35349 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr16-4217 chr16 13177101 13177311 + 12.8 0.000 intron (NM_001145204, intron 2 of 4) intron (NM_001145204, intron 2 of 4) 275608 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr4-2880 chr4 76704348 76704558 + 12.8 0.000 intron (NM_020859, intron 2 of 10) L2a|LINE|L2 128902 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr15-1410 chr15 47514681 47514891 + 12.8 0.000 intron (NM_001198999, intron 3 of 19) L2a|LINE|L2 -202719 NM_001358352 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr4-1665 chr4 132517875 132518085 + 12.8 0.000 Intergenic L1MEg|LINE|L1 -73109 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr8-725 chr8 89757730 89757940 + 12.8 0.000 promoter-TSS (NM_003821) promoter-TSS (NM_003821) 19 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding chr13-1477 chr13 99808420 99808630 + 12.8 0.000 intron (NR_120421, intron 1 of 4) MamRep1151|LTR?|LTR? -79524 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr11-871 chr11 33015835 33016045 + 12.8 0.000 promoter-TSS (NM_139160) promoter-TSS (NM_139160) 62 NM_001077242 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chrX-610 chrX 153907597 153907807 + 12.8 0.000 TTS (NM_000054) TTS (NM_000054) 2988 NM_001146151 554 Hs.567240 NM_000054 ENSG00000126895 AVPR2 ADHR|DI1|DIR|DIR3|NDI|V2R arginine vasopressin receptor 2 protein-coding chr22-1743 chr22 23049178 23049388 + 12.8 0.000 Intergenic L1PB1|LINE|L1 -21236 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr13-1339 chr13 36298183 36298393 + 12.8 0.000 promoter-TSS (NM_001144982) promoter-TSS (NM_001144982) -433 NM_001144982 728591 Hs.656745 NM_001144981 ENSG00000242715 CCDC169 C13orf38 coiled-coil domain containing 169 protein-coding chr11-1957 chr11 130103430 130103640 + 12.8 0.000 intron (NM_001243299, intron 1 of 16) intron (NM_001243299, intron 1 of 16) 32967 NM_001243299 334 Hs.370247 NM_001642 ENSG00000084234 APLP2 APLP-2|APPH|APPL2|CDEBP amyloid beta precursor like protein 2 protein-coding chr1-3345 chr1 44730876 44731086 + 12.8 0.000 TTS (NR_002755) TTS (NR_002755) 187 NR_002755 26830 NR_002755 ENSG00000200169 RNU5D-1 RNU5D|U5DL|U5DS RNA, U5D small nuclear 1 snRNA chr22-564 chr22 39592697 39592907 + 12.8 0.000 intron (NM_001003406, intron 1 of 35) intron (NM_001003406, intron 1 of 35) 22049 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr7-2525 chr7 47286141 47286351 + 12.8 0.000 intron (NM_022748, intron 27 of 30) intron (NM_022748, intron 27 of 30) 178557 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr17-1627 chr17 2081580 2081790 + 12.8 0.000 intron (NM_001256827, intron 8 of 11) intron (NM_001256827, intron 8 of 11) 7076 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr2-2491 chr2 147711184 147711394 + 12.8 0.000 Intergenic L1M4a2|LINE|L1 -133228 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr1-3502 chr1 153634324 153634534 + 12.8 0.000 promoter-TSS (NM_001024210) promoter-TSS (NM_001024210) -68 NM_001024210 6284 Hs.516505 NM_005979 ENSG00000189171 S100A13 - S100 calcium binding protein A13 protein-coding chr6-1178 chr6 125835584 125835794 + 12.8 0.000 intron (NM_001199621, intron 2 of 14) MLT1K|LTR|ERVL-MaLR -16831 NR_126386 104355145 Hs.590370 NR_126386 ENSG00000232131 NCOA7-AS1 - NCOA7 antisense RNA 1 ncRNA chr12-1199 chr12 110124417 110124627 + 12.8 0.000 non-coding (NR_144952, exon 1 of 20) non-coding (NR_144952, exon 1 of 20) 165 NR_144950 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr11-1644 chr11 102851391 102851601 + 12.8 0.000 Intergenic Intergenic -7887 NM_002422 4314 Hs.375129 NM_002422 ENSG00000149968 MMP3 CHDS6|MMP-3|SL-1|STMY|STMY1|STR1 matrix metallopeptidase 3 protein-coding chr1-2333 chr1 211416365 211416575 + 12.8 0.000 intron (NR_026761, intron 4 of 5) CpG 33715 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA chr17-2083 chr17 80386252 80386462 + 12.8 0.000 exon (NM_001256071, exon 62 of 68) exon (NM_001256071, exon 62 of 68) -28810 NM_001164637 284131 Hs.389678 NM_173627 ENSG00000173818 ENDOV - endonuclease V protein-coding chr18-1019 chr18 58339144 58339354 + 12.8 0.000 intron (NM_001144965, intron 13 of 30) intron (NM_001144965, intron 13 of 30) -111825 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr18-867 chr18 36382733 36382943 + 12.8 0.000 intron (NM_001281740, intron 3 of 28) PABL_A|LTR|ERV1 85125 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr5-1330 chr5 134784830 134785040 + 12.8 0.000 intron (NM_001300860, intron 10 of 22) intron (NM_001300860, intron 10 of 22) 26156 NM_001300860 9879 Hs.406549 NM_014829 ENSG00000145833 DDX46 PRPF5|Prp5 DEAD-box helicase 46 protein-coding chr13-573 chr13 42272299 42272509 + 12.8 0.000 intron (NM_016248, intron 1 of 12) CpG 252 NM_016248 11215 Hs.105105 NM_016248 ENSG00000023516 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A-kinase anchoring protein 11 protein-coding chr2-2809 chr2 46706685 46706895 + 12.8 0.000 intron (NM_144949, intron 1 of 1) intron (NM_144949, intron 1 of 1) 7495 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr8-1411 chr8 55901796 55902006 + 12.8 0.000 TTS (NR_145767) TTS (NR_145767) 954 NR_145767 109617001 NR_145767 ENSG00000199405 SNORA1B - small nucleolar RNA, H/ACA box 1B snoRNA chr6-956 chr6 12290213 12290423 + 12.8 0.000 promoter-TSS (NM_001955) promoter-TSS (NM_001955) -43 NM_001168319 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr15-907 chr15 55588184 55588394 + 12.8 0.000 promoter-TSS (NM_001330326) promoter-TSS (NM_001330326) 56 NM_001367806 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr15-2063 chr15 60345055 60345265 + 12.8 0.000 Intergenic MER91C|DNA|hAT-Tip100 52826 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr18-420 chr18 61894336 61894546 + 12.8 0.000 Intergenic CpG -1434 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr1-4117 chr1 245079199 245079409 + 12.8 0.000 intron (NM_032328, intron 4 of 7) intron (NM_032328, intron 4 of 7) -75681 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr6-2235 chr6 45815595 45815805 + 12.8 0.000 Intergenic Plat_L3|LINE|CR1 121897 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr4-868 chr4 119543999 119544209 + 12.8 0.000 intron (NM_033437, intron 9 of 20) intron (NM_033437, intron 9 of 20) 83633 NM_033430 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr1-8392 chr1 77508955 77509165 + 12.8 0.000 intron (NM_012093, intron 10 of 13) MIR3|SINE|MIR 173598 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr18-1029 chr18 79336415 79336625 + 12.8 0.000 intron (NR_148360, intron 18 of 31) intron (NR_148360, intron 18 of 31) -59410 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr8-2783 chr8 120481252 120481462 + 12.8 0.000 intron (NM_022045, intron 11 of 21) L1ME1|LINE|L1 35938 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr21-297 chr21 26071021 26071231 + 12.8 0.000 intron (NM_001136131, intron 3 of 15) intron (NM_001136131, intron 3 of 15) 69264 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr18-625 chr18 10936717 10936927 + 12.7 0.000 intron (NM_022068, intron 3 of 51) intron (NM_022068, intron 3 of 51) -177173 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr5-1569 chr5 136020343 136020553 + 12.7 0.000 Intergenic Intergenic -8540 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding chr4-5196 chr4 160589908 160590118 + 12.7 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -812229 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr3-783 chr3 52445057 52445267 + 12.7 0.000 promoter-TSS (NM_020163) promoter-TSS (NM_020163) -59 NM_020163 56920 Hs.59729 NM_020163 ENSG00000010319 SEMA3G sem2 semaphorin 3G protein-coding chr8-1434 chr8 120778849 120779059 + 12.7 0.000 intron (NM_021021, intron 1 of 6) (ATTT)n|Simple_repeat|Simple_repeat 17701 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr1-5227 chr1 197392552 197392762 + 12.7 0.000 intron (NM_001193640, intron 3 of 9) intron (NM_001193640, intron 3 of 9) 124405 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr4-1271 chr4 41155494 41155704 + 12.7 0.000 intron (NM_173075, intron 1 of 16) (GACA)n|Simple_repeat|Simple_repeat 58943 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr7-2126 chr7 32293033 32293243 + 12.7 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 6190 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr10-1416 chr10 119651284 119651494 + 12.7 0.000 promoter-TSS (NM_004281) promoter-TSS (NM_004281) 19 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr8-3544 chr8 123394660 123394870 + 12.7 0.000 intron (NM_014109, intron 1 of 27) intron (NM_014109, intron 1 of 27) 1682 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr12-5501 chr12 127509498 127509708 + 12.7 0.000 Intergenic Intergenic 126864 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LINC02411 - long intergenic non-protein coding RNA 2411 ncRNA chr6-1174 chr6 97283275 97283485 + 12.7 0.000 promoter-TSS (NM_001350599) promoter-TSS (NM_001350599) -164 NM_001350600 253714 Hs.444292 NM_198468 ENSG00000146263 MMS22L C6orf167|dJ39B17.2 MMS22 like, DNA repair protein protein-coding chr7-5421 chr7 35508020 35508230 + 12.7 0.000 Intergenic MER5A|DNA|hAT-Charlie 187010 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding chr1-9811 chr1 59520357 59520567 + 12.7 0.000 intron (NM_001278224, intron 1 of 9) intron (NM_001278224, intron 1 of 9) 4832 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr9-2086 chr9 77879573 77879783 + 12.7 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 152133 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr9-3835 chr9 130214293 130214503 + 12.7 0.000 intron (NM_014286, intron 2 of 7) MER31B|LTR|ERV1 13998 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr3-2309 chr3 122679591 122679801 + 12.7 0.000 Intergenic Intergenic -1143 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr6-1538 chr6 56808938 56809148 + 12.7 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 34622 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6-1799 chr6 127201408 127201618 + 12.7 0.000 Intergenic Intergenic -65169 NM_001242851 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr14-686 chr14 100544842 100545052 + 12.7 0.000 intron (NM_001159531, intron 3 of 5) intron (NM_001159531, intron 3 of 5) 23123 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr12-1474 chr12 7555866 7556076 + 12.7 0.000 Intergenic Intergenic -52153 NM_203416 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding chr9-3272 chr9 33598848 33599058 + 12.7 0.000 Intergenic Intergenic -25272 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr10-5987 chr10 124474288 124474498 + 12.7 0.000 intron (NM_001318332, intron 1 of 5) AluJb|SINE|Alu 12570 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr7-4594 chr7 16967857 16968067 + 12.7 0.000 Intergenic Intergenic -85979 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr10-1966 chr10 30491326 30491536 + 12.7 0.000 Intergenic Intergenic 56785 NM_001320961 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding chr1-5659 chr1 30670421 30670631 + 12.7 0.000 Intergenic L2a|LINE|L2 -48246 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr9-1882 chr9 109600196 109600406 + 12.7 0.000 Intergenic LTR33|LTR|ERVL -40487 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr17-2346 chr17 63866738 63866948 + 12.7 0.000 Intergenic MamGypLTR3|LTR|Gypsy 6886 NM_020991 1443 Hs.654515 NM_020991 ENSG00000213218 CSH2 CS-2|CSB|GHB1|PL|hCS-B chorionic somatomammotropin hormone 2 protein-coding chr10-4520 chr10 91805285 91805495 + 12.7 0.000 intron (NM_025235, intron 1 of 26) intron (NM_025235, intron 1 of 26) 6964 NM_025235 80351 Hs.329327 NM_025235 ENSG00000107854 TNKS2 ARTD6|PARP-5b|PARP-5c|PARP5B|PARP5C|TANK2|TNKL|pART6 tankyrase 2 protein-coding chr14-1712 chr14 22164610 22164820 + 12.7 0.000 Intergenic MER31A|LTR|ERV1 268038 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr7-1068 chr7 39733370 39733580 + 12.7 0.000 promoter-TSS (NR_026999) promoter-TSS (NR_026999) -93 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr9-4915 chr9 10036012 10036222 + 12.7 0.000 intron (NM_002839, intron 3 of 45) intron (NM_002839, intron 3 of 45) 236725 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr3-3622 chr3 104214627 104214837 + 12.7 0.000 Intergenic LTR41C|LTR|ERVL -690616 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr3-2681 chr3 48763556 48763766 + 12.7 0.000 intron (NM_001321982, intron 8 of 11) L2b|LINE|L2 -46383 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr20-982 chr20 49887201 49887411 + 12.7 0.000 intron (NR_048539, intron 13 of 13) intron (NR_048539, intron 13 of 13) 23447 NR_162136 113219455 NR_162136 MIR12122 - microRNA 12122 ncRNA chr1-2226 chr1 155989326 155989536 + 12.7 0.000 Intergenic Intergenic -9871 NM_001350112 9181 Hs.743352 NM_004723 ENSG00000116584 ARHGEF2 GEF|GEF-H1|GEFH1|LFP40|NEDMHM|P40 Rho/Rac guanine nucleotide exchange factor 2 protein-coding chr13-713 chr13 51152847 51153057 + 12.7 0.000 intron (NR_102431, intron 1 of 4) intron (NR_102431, intron 1 of 4) 19270 NR_102432 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr18-2104 chr18 51029060 51029270 + 12.7 0.000 Intergenic Charlie2b|DNA|hAT-Charlie -1048 NM_005359 4089 Hs.75862 NM_005359 ENSG00000141646 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding chr16-4158 chr16 5042096 5042306 + 12.7 0.000 non-coding (NR_038913, exon 2 of 2) non-coding (NR_038913, exon 2 of 2) -8266 NM_016256 51172 Hs.21334 NM_016256 ENSG00000103174 NAGPA APAA|UCE N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein-coding chr2-3899 chr2 46063039 46063249 + 12.7 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -234263 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr11-2065 chr11 74397558 74397768 + 12.7 0.000 intron (NM_173582, intron 1 of 13) intron (NM_173582, intron 1 of 13) 770 NM_173582 283209 Hs.26612 NM_173582 ENSG00000165434 PGM2L1 BM32A|PMMLP phosphoglucomutase 2 like 1 protein-coding chr4-1230 chr4 790723 790933 + 12.7 0.000 intron (NM_006651, intron 3 of 3) (CT)n|Simple_repeat|Simple_repeat -8980 NR_036511 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr11-1828 chr11 65212610 65212820 + 12.7 0.000 TTS (NM_005186) TTS (NM_005186) -1125 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr1-3002 chr1 211896996 211897206 + 12.7 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger 66140 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr6-1649 chr6 139568911 139569121 + 12.7 0.000 Intergenic L3|LINE|CR1 -94420 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr17-2631 chr17 4665077 4665287 + 12.7 0.000 Intergenic Intergenic -23504 NM_001140 246 Hs.73809 NM_001140 ENSG00000161905 ALOX15 12-LOX|15-LOX|15-LOX-1|LOG15 arachidonate 15-lipoxygenase protein-coding chr17-2450 chr17 32324050 32324260 + 12.7 0.000 3' UTR (NM_001330181, exon 8 of 8) 3' UTR (NM_001330181, exon 8 of 8) 18018 NM_022344 64149 Hs.655257 NM_022344 ENSG00000108666 C17orf75 NJMU-R1|SRI2 chromosome 17 open reading frame 75 protein-coding chr11-2251 chr11 93143303 93143513 + 12.7 0.000 TTS (NM_001286139) TTS (NM_001286139) 54018 NM_001286139 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr17-2368 chr17 74356661 74356871 + 12.7 0.000 TTS (NM_153209) TTS (NM_153209) 5102 NM_001080466 388419 NM_001080466 ENSG00000204347 BTBD17 BTBD17A|LGALS3BPL|TANGO10A BTB domain containing 17 protein-coding chr19-2090 chr19 48925405 48925615 + 12.7 0.000 Intergenic AluJo|SINE|Alu -6619 NR_046633 100874085 Hs.569933 NR_046633 ENSG00000235191 NUCB1-AS1 - NUCB1 antisense RNA 1 ncRNA chr7-2435 chr7 118214339 118214549 + 12.7 0.000 Intergenic CpG -10260 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr1-4051 chr1 203995254 203995464 + 12.7 0.000 Intergenic Intergenic 45905 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr1-6028 chr1 64564712 64564922 + 12.7 0.000 intron (NM_020925, intron 2 of 26) intron (NM_020925, intron 2 of 26) -15030 NR_039957 100616338 NR_039957 ENSG00000264470 MIR4794 - microRNA 4794 ncRNA chr3-1801 chr3 42025628 42025838 + 12.7 0.000 Intergenic Intergenic -61467 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr7-2846 chr7 104883751 104883961 + 12.7 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) 42789 NR_027374 723809 Hs.124316 NR_027374 ENSG00000225329 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA chr1-4304 chr1 27353275 27353485 + 12.7 0.000 exon (NM_001193308, exon 14 of 15) exon (NM_001193308, exon 14 of 15) 11358 NM_032872 84958 Hs.469175 NM_032872 ENSG00000142765 SYTL1 JFC1|SLP1 synaptotagmin like 1 protein-coding chr5-2362 chr5 79744218 79744428 + 12.7 0.000 intron (NM_153610, intron 3 of 12) intron (NM_153610, intron 3 of 12) 54487 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr4-3143 chr4 178037732 178037942 + 12.7 0.000 Intergenic LTR62|LTR|ERVL -129901 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr14-1784 chr14 102911006 102911216 + 12.7 0.000 3' UTR (NM_003300, exon 11 of 11) 3' UTR (NM_003300, exon 11 of 11) -11545 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr12-2413 chr12 47998761 47998971 + 12.7 0.000 intron (NM_033150, intron 1 of 52) intron (NM_033150, intron 1 of 52) 5610 NM_001844 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr4-1629 chr4 75643698 75643908 + 12.7 0.000 3' UTR (NM_203505, exon 12 of 12) 3' UTR (NM_203505, exon 12 of 12) -13275 NM_003948 8999 Hs.591698 NM_003948 ENSG00000138769 CDKL2 KKIAMRE|P56 cyclin dependent kinase like 2 protein-coding chr15-1737 chr15 42197711 42197921 + 12.7 0.000 intron (NM_001301138, intron 2 of 25) intron (NM_001301138, intron 2 of 25) 1850 NR_030357 693212 NR_030357 ENSG00000207712 MIR627 MIRN627|hsa-mir-627|mir-627 microRNA 627 ncRNA chr17-2855 chr17 28979473 28979683 + 12.7 0.000 intron (NM_001290202, intron 3 of 16) intron (NM_001290202, intron 3 of 16) 26455 NM_001098635 124925 Hs.21837 NM_178860 ENSG00000063015 SEZ6 BSRPC seizure related 6 homolog protein-coding chr8-4755 chr8 142876884 142877094 + 12.7 0.000 intron (NM_001026213, intron 3 of 7) intron (NM_001026213, intron 3 of 7) 2831 NM_001026213 1584 Hs.184927 NM_000497 ENSG00000160882 CYP11B1 CPN1|CYP11B|FHI|P450C11 cytochrome P450 family 11 subfamily B member 1 protein-coding chr22-1626 chr22 32071524 32071734 + 12.7 0.000 intron (NM_000343, intron 5 of 14) intron (NM_000343, intron 5 of 14) 12459 NM_001256314 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr10-3758 chr10 122660407 122660617 + 12.7 0.000 Intergenic Intergenic -12370 NM_001364461 112577516 NM_001364461 LOC112577516 - carbohydrate-binding protein AQN-1-like protein-coding chr6-1611 chr6 52424105 52424315 + 12.7 0.000 intron (NR_033327, intron 2 of 9) intron (NR_033327, intron 2 of 9) 3202 NM_001172420 114327 Hs.403171 NM_018100 ENSG00000096093 EFHC1 EJM1|dJ304B14.2 EF-hand domain containing 1 protein-coding chr17-2215 chr17 81188022 81188232 + 12.7 0.000 Intergenic Intergenic -21906 NM_001080395 9625 Hs.514575 NM_004920 ENSG00000181409 AATK AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP apoptosis associated tyrosine kinase protein-coding chr20-1591 chr20 4555613 4555823 + 12.7 0.000 Intergenic Intergenic -130738 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr7-5745 chr7 74145199 74145409 + 12.7 0.000 Intergenic LTR1D1|LTR|ERV1 -29052 NM_031992 7458 Hs.520943 NM_022170 ENSG00000106682 EIF4H WBSCR1|WSCR1|eIF-4H eukaryotic translation initiation factor 4H protein-coding chr18-2182 chr18 59990290 59990500 + 12.7 0.000 Intergenic MamRep605|LTR?|LTR? 90399 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr12-4499 chr12 21635651 21635861 + 12.7 0.000 intron (NM_001174097, intron 7 of 7) intron (NM_001174097, intron 7 of 7) 22038 NM_001174097 3945 Hs.446149 NM_002300 ENSG00000111716 LDHB HEL-S-281|LDH-B|LDH-H|LDHBD|TRG-5 lactate dehydrogenase B protein-coding chr19-1227 chr19 17126146 17126356 + 12.7 0.000 intron (NM_001130065, intron 2 of 39) intron (NM_001130065, intron 2 of 39) 34016 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chr9-5176 chr9 69711547 69711757 + 12.7 0.000 non-coding (NR_159515, exon 7 of 7) non-coding (NR_159515, exon 7 of 7) -39281 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr6-2221 chr6 43683137 43683347 + 12.7 0.000 intron (NM_001193343, intron 1 of 4) intron (NM_001193343, intron 1 of 4) 4570 NM_001193343 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr9-2085 chr9 77849016 77849226 + 12.7 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 182690 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr2-4946 chr2 174840498 174840708 + 12.7 0.000 intron (NM_001025201, intron 7 of 12) L2b|LINE|L2 7015 NM_001206602 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr4-839 chr4 15779407 15779617 + 12.7 0.000 intron (NR_132660, intron 1 of 6) intron (NR_132660, intron 1 of 6) 1184 NM_001775 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr5-2091 chr5 7576302 7576512 + 12.7 0.000 intron (NM_020546, intron 3 of 24) intron (NM_020546, intron 3 of 24) 180269 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chr1-4366 chr1 147495218 147495428 + 12.7 0.000 intron (NR_038423, intron 3 of 3) MIRc|SINE|MIR 22552 NR_038423 100289211 Hs.323484 NR_038423 ENSG00000278811 LINC00624 - long intergenic non-protein coding RNA 624 ncRNA chr5-422 chr5 32444554 32444764 + 12.7 0.000 promoter-TSS (NR_144318) promoter-TSS (NR_144318) 81 NR_144318 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr1-3003 chr1 212558863 212559073 + 12.7 0.000 Intergenic CpG -6366 NM_001030287 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chr5-3420 chr5 150249245 150249455 + 12.7 0.000 intron (NM_001369025, intron 11 of 17) intron (NM_001369025, intron 11 of 17) 40423 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chr12-1775 chr12 93958038 93958248 + 12.7 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -14537 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr10-4026 chr10 12774418 12774628 + 12.7 0.000 intron (NM_001351032, intron 7 of 11) L2a|LINE|L2 -49170 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr11-3159 chr11 61353928 61354138 + 12.7 0.000 TTS (NM_001351978) TTS (NM_001351978) 3281 NM_001161452 220002 Hs.22546 NM_153611 ENSG00000162144 CYB561A3 CYBASC3|LCYTB cytochrome b561 family member A3 protein-coding chr13-1540 chr13 28295566 28295776 + 12.7 0.000 TTS (NM_175854) TTS (NM_175854) -156497 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr17-2204 chr17 78800289 78800499 + 12.7 0.000 intron (NM_001321291, intron 17 of 20) intron (NM_001321291, intron 17 of 20) -18052 NM_004762 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr6-1246 chr6 4351982 4352192 + 12.7 0.000 Intergenic Intergenic -136711 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr18-939 chr18 79759875 79760085 + 12.7 0.000 Intergenic AluSx|SINE|Alu 78550 NM_001202504 9150 Hs.465490 NM_004715 ENSG00000060069 CTDP1 CCFDN|FCP1 CTD phosphatase subunit 1 protein-coding chr6-2391 chr6 146782932 146783142 + 12.7 0.000 intron (NM_024694, intron 30 of 35) L2|LINE|L2 20787 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr10-1313 chr10 72846331 72846541 + 12.7 0.000 intron (NM_138357, intron 2 of 7) MER44B|DNA|TcMar-Tigger -47303 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr2-3284 chr2 39583804 39584014 + 12.7 0.000 intron (NR_037875, intron 5 of 5) MIRb|SINE|MIR -81589 NM_001167959 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr12-1792 chr12 123365186 123365396 + 12.7 0.000 promoter-TSS (NR_107039) promoter-TSS (NR_107039) 343 NR_157806 112268105 Hs.7012 NR_157805 SBNO1-AS1 - SBNO1 antisense RNA 1 ncRNA chr1-3151 chr1 67149294 67149504 + 12.7 0.000 Intergenic Intergenic -14429 NM_001276352 400757 Hs.666621 NM_001013674 ENSG00000203963 C1orf141 - chromosome 1 open reading frame 141 protein-coding chrX-2723 chrX 123808259 123808469 + 12.7 0.000 Intergenic Intergenic -51448 NM_001204401 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr11-3125 chr11 40202937 40203147 + 12.7 0.000 intron (NM_020929, intron 3 of 4) intron (NM_020929, intron 3 of 4) 90088 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr3-7078 chr3 177810157 177810367 + 12.7 0.000 Intergenic Intergenic -6603 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr3-6422 chr3 101243784 101243994 + 12.7 0.000 exon (NM_016247, exon 13 of 19) exon (NM_016247, exon 13 of 19) 76686 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr12-2531 chr12 98574202 98574412 + 12.7 0.000 Intergenic Intergenic -19318 NM_005888 5250 Hs.290404 NM_002635 ENSG00000075415 SLC25A3 OK/SW-cl.48|PHC|PTP solute carrier family 25 member 3 protein-coding chr10-2298 chr10 26792898 26793108 + 12.7 0.000 intron (NM_001012752, intron 2 of 9) intron (NM_001012752, intron 2 of 9) 68084 NM_001178124 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr6-3386 chr6 52148993 52149203 + 12.7 0.000 TTS (NR_029903) TTS (NR_029903) 175 NR_029903 442890 NR_029903 ENSG00000199080 MIR133B MIRN133B|miRNA133B|mir-133b microRNA 133b ncRNA chr2-5613 chr2 186256607 186256817 + 12.7 0.000 Intergenic Intergenic -170395 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr11-2777 chr11 69911469 69911679 + 12.7 0.000 Intergenic Intergenic -92158 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr22-842 chr22 45478405 45478615 + 12.7 0.000 Intergenic L1ME4c|LINE|L1 -24373 NM_006486 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr13-1964 chr13 110850152 110850362 + 12.7 0.000 Intergenic Intergenic 20051 NR_027701 283487 Hs.245390 NM_178514 ENSG00000255874 LINC00346 C13orf29|NCRNA00346 long intergenic non-protein coding RNA 346 ncRNA chr1-10728 chr1 196076453 196076663 + 12.7 0.000 intron (NR_146895, intron 1 of 3) MIRb|SINE|MIR 12157 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr13-1172 chr13 38448360 38448570 + 12.7 0.000 Intergenic L1ME1|LINE|L1 98614 NM_001286705 51569 Hs.643655 NM_016617 ENSG00000120686 UFM1 BM-002|C13orf20|HLD14 ubiquitin fold modifier 1 protein-coding chr1-4434 chr1 230509895 230510105 + 12.7 0.000 Intergenic MER21C|LTR|ERVL -83668 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr10-1230 chr10 69360822 69361032 + 12.7 0.000 intron (NM_033496, intron 3 of 17) intron (NM_033496, intron 3 of 17) 42080 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr4-1345 chr4 184733356 184733566 + 12.7 0.000 intron (NR_104593, intron 1 of 11) CpG 635 NM_024629 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr10-2164 chr10 119370519 119370729 + 12.7 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -7348 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chrX-958 chrX 101602088 101602298 + 12.7 0.000 Intergenic Intergenic 15807 NM_019007 54470 Hs.83530 NM_019007 ENSG00000198960 ARMCX6 GASP10 armadillo repeat containing X-linked 6 protein-coding chr19-1032 chr19 4513514 4513724 + 12.7 0.000 exon (NM_001367868, exon 5 of 8) exon (NM_001367868, exon 5 of 8) 4867 NM_001367868 729359 Hs.591387 NM_001080400 ENSG00000167676 PLIN4 KIAA1881|S3-12 perilipin 4 protein-coding chrX-862 chrX 141609532 141609742 + 12.7 0.000 intron (NR_037183, intron 3 of 3) MER117|DNA|hAT-Charlie -16227 NM_001318917 645188 Hs.679802 NM_001318917 LOC645188 SPANX-L uncharacterized LOC645188 protein-coding chr15-2265 chr15 49094763 49094973 + 12.7 0.000 Intergenic Intergenic -48422 NM_014701 9728 Hs.9997 NM_014701 ENSG00000138593 SECISBP2L SBP2L|SLAN SECIS binding protein 2 like protein-coding chr18-2350 chr18 35090138 35090348 + 12.7 0.000 intron (NM_001143827, intron 3 of 7) L1MB7|LINE|L1 48830 NR_046177 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr6-4337 chr6 17120793 17121003 + 12.7 0.000 intron (NM_001190766, intron 3 of 4) intron (NM_001190766, intron 3 of 4) 18640 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr8-1870 chr8 19340997 19341207 + 12.7 0.000 intron (NM_001363110, intron 4 of 8) intron (NM_001363110, intron 4 of 8) 27126 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr12-3180 chr12 51505296 51505506 + 12.7 0.000 intron (NM_001039960, intron 23 of 24) MIRc|SINE|MIR 80284 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chrX-542 chrX 149960466 149960676 + 12.7 0.000 intron (NR_027456, intron 7 of 11) intron (NR_027456, intron 7 of 11) 22023 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr9-2060 chr9 34046762 34046972 + 12.7 0.000 intron (NM_001370059, intron 1 of 28) intron (NM_001370059, intron 1 of 28) 2020 NR_163243 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr3-1037 chr3 170469289 170469499 + 12.7 0.000 intron (NR_135557, intron 1 of 2) intron (NR_135557, intron 1 of 2) 2109 NR_135555 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr1-4146 chr1 6604136 6604346 + 12.7 0.000 Intergenic Intergenic -1372 NM_001324309 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr3-2867 chr3 43794788 43794998 + 12.7 0.000 Intergenic Intergenic -103299 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr17-2124 chr17 18127460 18127670 + 12.7 0.000 intron (NM_016239, intron 7 of 64) intron (NM_016239, intron 7 of 64) 18809 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr10-5135 chr10 51291119 51291329 + 12.7 0.000 intron (NM_001098512, intron 2 of 17) MLT1K|LTR|ERVL-MaLR -8349 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr3-4079 chr3 100021306 100021516 + 12.7 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) -57013 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr2-1920 chr2 187567200 187567410 + 12.7 0.000 Intergenic Intergenic -12800 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr1-3159 chr1 78079574 78079784 + 12.7 0.000 intron (NM_017655, intron 1 of 5) L2b|LINE|L2 33713 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr2-7737 chr2 37180018 37180228 + 12.7 0.000 intron (NM_001367551, intron 3 of 6) L3|LINE|CR1 8547 NM_001367551 391365 Hs.631892 NM_001032377 ENSG00000138068 SULT6B1 ST6B1 sulfotransferase family 6B member 1 protein-coding chr15-1116 chr15 89769981 89770191 + 12.7 0.000 Intergenic Intergenic -6246 NM_001039958 145873 Hs.37311 NM_001039958 ENSG00000188095 MESP2 SCDO2|bHLHc6 mesoderm posterior bHLH transcription factor 2 protein-coding chr15-1615 chr15 85294604 85294814 + 12.7 0.000 Intergenic Intergenic 54358 NM_001310153 100133220 Hs.454625 NM_001310153 GOLGA6L3 - golgin A6 family like 3 protein-coding chr4-2625 chr4 147901321 147901531 + 12.7 0.000 intron (NM_024605, intron 10 of 22) intron (NM_024605, intron 10 of 22) 118831 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr15-2820 chr15 39025419 39025629 + 12.7 0.000 Intergenic Intergenic -225145 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chrX-454 chrX 119266382 119266592 + 12.7 0.000 Intergenic Intergenic -25042 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr14-1633 chr14 104083693 104083903 + 12.7 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -1902 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr14-966 chr14 68589532 68589742 + 12.7 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 39150 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr5-3363 chr5 138123412 138123622 + 12.7 0.000 intron (NM_003551, intron 4 of 5) L1MA8|LINE|L1 15911 NM_003551 8382 Hs.730856 NM_003551 ENSG00000112981 NME5 NM23-H5|NM23H5|RSPH23 NME/NM23 family member 5 protein-coding chr18-874 chr18 40877056 40877266 + 12.7 0.000 Intergenic Intergenic 643516 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr13-2652 chr13 80237760 80237970 + 12.7 0.000 Intergenic Intergenic 101794 NM_001318538 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr11-1491 chr11 680574 680784 + 12.7 0.000 intron (NM_001293634, intron 5 of 10) intron (NM_001293634, intron 5 of 10) -14912 NM_001042463 283232 Hs.448664 NM_174940 ENSG00000177042 TMEM80 - transmembrane protein 80 protein-coding chr5-2797 chr5 1568512 1568722 + 12.7 0.000 Intergenic L1MC5a|LINE|L1 25914 NR_003263 728609 Hs.379186 NR_003263 SDHAP3 SDHACL|SDHAL succinate dehydrogenase complex flavoprotein subunit A pseudogene 3 pseudo chr3-1280 chr3 31981372 31981582 + 12.7 0.000 promoter-TSS (NM_001137674) promoter-TSS (NM_001137674) -273 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr2-3699 chr2 217711179 217711389 + 12.7 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 45309 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr12-3989 chr12 21543138 21543348 + 12.7 0.000 intron (NM_021957, intron 12 of 15) intron (NM_021957, intron 12 of 15) 15318 NR_135188 80763 Hs.130692 NM_030572 ENSG00000134548 SPX C12orf39 spexin hormone protein-coding chr12-2551 chr12 108294019 108294229 + 12.7 0.000 intron (NM_001142344, intron 1 of 2) MIRb|SINE|MIR 26538 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr17-4568 chr17 81315703 81315913 + 12.7 0.000 Intergenic Intergenic -6560 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr6-2759 chr6 121671443 121671653 + 12.7 0.000 Intergenic Intergenic 235902 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr12-2048 chr12 92672978 92673188 + 12.7 0.000 Intergenic L2|LINE|L2 -29760 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000187510 C12orf74 - chromosome 12 open reading frame 74 protein-coding chr13-701 chr13 36418086 36418296 + 12.7 0.000 Intergenic LTR26|LTR|ERV1 -13639 NM_001111046 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr1-10771 chr1 201123336 201123546 + 12.7 0.000 Intergenic MIR|SINE|MIR -8069 NM_001270601 647219 Hs.143949 NM_001270601 ENSG00000232237 ASCL5 bHLHa47 achaete-scute family bHLH transcription factor 5 protein-coding chr2-9200 chr2 216691494 216691704 + 12.7 0.000 intron (NM_000599, intron 1 of 3) intron (NM_000599, intron 1 of 3) 3950 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr15-1013 chr15 78672975 78673185 + 12.7 0.000 Intergenic Intergenic -31870 NM_000750 1143 Hs.624178 NM_000750 ENSG00000117971 CHRNB4 - cholinergic receptor nicotinic beta 4 subunit protein-coding chr7-2954 chr7 151893300 151893510 + 12.7 0.000 Intergenic Intergenic -16290 NM_016203 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr2-4053 chr2 112630280 112630490 + 12.7 0.000 Intergenic Intergenic 13795 NR_033871 400999 Hs.585221 NR_033871 FLJ42351 - uncharacterized LOC400999 ncRNA chr7-2210 chr7 110943883 110944093 + 12.7 0.000 intron (NM_032549, intron 4 of 5) intron (NM_032549, intron 4 of 5) -147018 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr6-4077 chr6 141224824 141225034 + 12.7 0.000 Intergenic Intergenic 541115 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr15-2007 chr15 44997860 44998070 + 12.7 0.000 Intergenic Intergenic -25230 NR_034039 6652 Hs.878 NM_003104 ENSG00000140263 SORD HEL-S-95n|RDH|SDH|SORD1|XDH sorbitol dehydrogenase protein-coding chrX-2131 chrX 31835766 31835976 + 12.7 0.000 intron (NM_000109, intron 49 of 78) intron (NM_000109, intron 49 of 78) 319598 NM_004013 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-4279 chr3 152925846 152926056 + 12.7 0.000 Intergenic L2b|LINE|L2 90820 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr6-2308 chr6 108636101 108636311 + 12.7 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 75289 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr4-1585 chr4 10273033 10273243 + 12.7 0.000 Intergenic Intergenic -156339 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr8-4618 chr8 132175183 132175393 + 12.7 0.000 intron (NM_001204824, intron 5 of 14) intron (NM_001204824, intron 5 of 14) -70023 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr1-4793 chr1 18274525 18274735 + 12.7 0.000 intron (NM_032880, intron 2 of 9) MER58A|DNA|hAT-Charlie 166832 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr10-3651 chr10 99945440 99945650 + 12.7 0.000 intron (NR_024130, intron 2 of 4) MER99|DNA|hAT? -14638 NM_001318326 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr16-3846 chr16 66647603 66647813 + 12.7 0.000 intron (NM_181521, intron 1 of 3) FLAM_A|SINE|Alu 42977 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr9-2722 chr9 92277877 92278087 + 12.7 0.000 intron (NR_073446, intron 7 of 32) intron (NR_073446, intron 7 of 32) 14565 NR_037424 100500918 NR_037424 ENSG00000281156 MIR3651 mir-3651 microRNA 3651 ncRNA chr6-3311 chr6 164322663 164322873 + 12.7 0.000 Intergenic Intergenic 499295 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr10-1904 chr10 122766625 122766835 + 12.7 0.000 intron (NR_003570, intron 7 of 27) (CA)n|Simple_repeat|Simple_repeat 10036 NR_003570 375940 Hs.650695 NM_198577 ENSG00000176584 DMBT1P1 - deleted in malignant brain tumors 1 pseudogene 1 pseudo chr2-3753 chr2 3645231 3645441 + 12.7 0.000 TTS (NM_024027) TTS (NM_024027) -12864 NM_018436 55821 Hs.97899 NM_018436 ENSG00000151360 ALLC ALC allantoicase protein-coding chr22-1108 chr22 37784888 37785098 + 12.7 0.000 Intergenic L2b|LINE|L2 -20114 NM_005318 3005 Hs.745024 NM_005318 ENSG00000189060 H1F0 H10|H1FV H1 histone family member 0 protein-coding chr8-344 chr8 544764 544974 + 12.7 0.000 promoter-TSS (NM_001256113) promoter-TSS (NM_001256113) -24 NM_001256113 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr9-1996 chr9 126534886 126535096 + 12.7 0.000 Intergenic Intergenic -79452 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr9-2317 chr9 3955438 3955648 + 12.7 0.000 intron (NM_001042413, intron 4 of 10) MIRc|SINE|MIR 56897 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr12-1961 chr12 115172604 115172814 + 12.7 0.000 Intergenic Intergenic -488534 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr4-4199 chr4 13598909 13599119 + 12.7 0.000 exon (NM_148894, exon 10 of 26) exon (NM_148894, exon 10 of 26) 28711 NM_148894 259282 Hs.744935 NM_148894 ENSG00000038219 BOD1L1 BOD1L|FAM44A biorientation of chromosomes in cell division 1 like 1 protein-coding chr16-1099 chr16 85275780 85275990 + 12.7 0.000 Intergenic Intergenic -7073 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr22-871 chr22 38657296 38657506 + 12.7 0.000 intron (NM_015373, intron 1 of 4) MIR|SINE|MIR 748 NM_001002880 25776 Hs.334911 NM_015373 ENSG00000100211 CBY1 C22orf2|CBY|Chibby1|HS508I15A|PGEA1|PIGEA-14|PIGEA14|arb1 chibby family member 1, beta catenin antagonist protein-coding chr7-1367 chr7 104963947 104964157 + 12.7 0.000 Intergenic LTR18C|LTR|ERVL 27113 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr16-2360 chr16 55672608 55672818 + 12.7 0.000 intron (NM_001172504, intron 3 of 13) intron (NM_001172504, intron 3 of 13) 1042 NM_001172502 6530 Hs.78036 NM_001043 ENSG00000103546 SLC6A2 NAT1|NET|NET1|SLC6A5 solute carrier family 6 member 2 protein-coding chr22-464 chr22 20702631 20702841 + 12.7 0.000 intron (NR_026815, intron 2 of 7) CpG-18798 1622 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chr17-3988 chr17 67461335 67461545 + 12.7 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -10049 NR_037517 100500895 NR_037517 ENSG00000207688 MIR548AA2 - microRNA 548aa-2 ncRNA chr2-6727 chr2 30068597 30068807 + 12.7 0.000 Intergenic MIRc|SINE|MIR -78305 NM_016061 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr16-1441 chr16 67942093 67942303 + 12.7 0.000 intron (NM_000229, intron 5 of 5) intron (NM_000229, intron 5 of 5) 1922 NM_000229 3931 Hs.387239 NM_000229 ENSG00000213398 LCAT - lecithin-cholesterol acyltransferase protein-coding chr5-2227 chr5 820969 821179 + 12.7 0.000 intron (NM_024786, intron 9 of 12) L1M5|LINE|L1 29912 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr5-1663 chr5 37016287 37016497 + 12.7 0.000 intron (NM_015384, intron 23 of 45) intron (NM_015384, intron 23 of 45) 139623 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr1-2936 chr1 51220321 51220531 + 12.7 0.000 intron (NR_147076, intron 1 of 1) MLT1H1-int|LTR|ERVL-MaLR 14670 NR_147076 105378716 NR_147076 ENSG00000203356 LINC01562 - long intergenic non-protein coding RNA 1562 ncRNA chr9-2322 chr9 8864436 8864646 + 12.7 0.000 intron (NM_002839, intron 11 of 45) intron (NM_002839, intron 11 of 45) 6523 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr15-2115 chr15 70011874 70012084 + 12.7 0.000 Intergenic Intergenic 67489 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr5-3253 chr5 98977678 98977888 + 12.7 0.000 intron (NR_151718, intron 1 of 3) intron (NR_151718, intron 1 of 3) -48069 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr21-263 chr21 45075017 45075227 + 12.7 0.000 promoter-TSS (NM_001346688) promoter-TSS (NM_001346688) 71 NM_001346688 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr1-4923 chr1 43719268 43719478 + 12.7 0.000 intron (NR_125986, intron 2 of 3) L1MB8|LINE|L1 7970 NR_125986 101929592 NR_125986 ENSG00000229444 LOC101929592 - uncharacterized LOC101929592 ncRNA chr17-4259 chr17 59362699 59362909 + 12.7 0.000 intron (NM_001005404, intron 2 of 4) intron (NM_001005404, intron 2 of 4) -3279 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chr17-1376 chr17 81142702 81142912 + 12.7 0.000 intron (NM_001080395, intron 1 of 13) intron (NM_001080395, intron 1 of 13) -9499 NR_031652 100302229 NR_031652 ENSG00000221025 MIR1250 MIRN1250|hsa-mir-1250|mir-1250 microRNA 1250 ncRNA chr4-569 chr4 183099171 183099381 + 12.7 0.000 promoter-TSS (NM_024949) promoter-TSS (NM_024949) 19 NM_024949 80014 Hs.333179 NM_024949 ENSG00000151718 WWC2 BOMB WW and C2 domain containing 2 protein-coding chr6-1820 chr6 145206291 145206501 + 12.7 0.000 Intergenic Intergenic 480481 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr14-2710 chr14 90182765 90182975 + 12.7 0.000 intron (NM_022054, intron 1 of 1) intron (NM_022054, intron 1 of 1) -73683 NM_002802 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr14-1355 chr14 102505444 102505654 + 12.7 0.000 3' UTR (NM_001348651, exon 4 of 4) 3' UTR (NM_001348651, exon 4 of 4) 4227 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr10-1845 chr10 51186482 51186692 + 12.7 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 112100 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr6-4107 chr6 151555518 151555728 + 12.7 0.000 intron (NM_025059, intron 5 of 10) intron (NM_025059, intron 5 of 10) 61606 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chr2-2560 chr2 219289759 219289969 + 12.7 0.000 3' UTR (NM_002846, exon 23 of 23) 3' UTR (NM_002846, exon 23 of 23) 4336 NR_029688 406944 NR_029688 ENSG00000207647 MIR153-1 MIRN153-1|mir-153-1 microRNA 153-1 ncRNA chr9-1465 chr9 77647831 77648041 + 12.7 0.000 5' UTR (NM_004297, exon 1 of 7) 5' UTR (NM_004297, exon 1 of 7) 386 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr12-3935 chr12 781275 781485 + 12.7 0.000 intron (NM_001184985, intron 1 of 27) intron (NM_001184985, intron 1 of 27) 28457 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr21-367 chr21 44982437 44982647 + 12.7 0.000 Intergenic Intergenic 11544 NR_033840 727699 Hs.397403 NR_033840 ENSG00000234880 LINC00163 C21orf134|NCRNA00163|NLC1-A|NLC1A long intergenic non-protein coding RNA 163 ncRNA chr15-2431 chr15 73493660 73493870 + 12.7 0.000 intron (NM_001348772, intron 2 of 4) intron (NM_001348772, intron 2 of 4) 50601 NM_001348772 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chr4-1590 chr4 19739183 19739393 + 12.7 0.000 Intergenic Intergenic -512617 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr2-4184 chr2 190416314 190416524 + 12.7 0.000 intron (NM_017694, intron 2 of 7) intron (NM_017694, intron 2 of 7) 8064 NM_017694 54842 Hs.418581 NM_017694 ENSG00000151690 MFSD6 MMR2|hMMR2 major facilitator superfamily domain containing 6 protein-coding chr20-864 chr20 3081247 3081457 + 12.7 0.000 Intergenic Intergenic 3372 NM_000490 551 Hs.89648 NM_000490 ENSG00000101200 AVP ADH|ARVP|AVP-NPII|AVRP|VP arginine vasopressin protein-coding chr17-1721 chr17 66508147 66508357 + 12.7 0.000 intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -91398 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr2-2515 chr2 174697265 174697475 + 12.7 0.000 Intergenic MER20|DNA|hAT-Charlie -14471 NM_001077269 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr5-1934 chr5 179194497 179194707 + 12.7 0.000 intron (NM_014244, intron 4 of 21) intron (NM_014244, intron 4 of 21) 134229 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr5-4354 chr5 168341029 168341239 + 12.7 0.000 intron (NM_001161661, intron 1 of 22) L2a|LINE|L2 49489 NM_001161661 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chrX-2781 chrX 131251442 131251652 + 12.7 0.000 Intergenic L1PA2|LINE|L1 37514 NM_001170963 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr12-2706 chr12 113889143 113889353 + 12.7 0.000 intron (NM_001146698, intron 21 of 24) MER20|DNA|hAT-Charlie 77077 NM_001146699 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr5-4576 chr5 24649242 24649452 + 12.7 0.000 Intergenic Intergenic -4369 NM_001317224 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr11-3628 chr11 73866898 73867108 + 12.7 0.000 Intergenic Intergenic -9696 NM_001267806 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr1-5174 chr1 169028060 169028270 + 12.7 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 58840 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr22-1017 chr22 25320312 25320522 + 12.7 0.000 TTS (NR_029395) TTS (NR_029395) 2160 NR_029395 91353 Hs.651077 NM_001013618 IGLL3P 16.1|IGLL3 immunoglobulin lambda like polypeptide 3, pseudogene pseudo chr22-1171 chr22 32850997 32851207 + 12.7 0.000 intron (NM_000362, intron 2 of 4) intron (NM_000362, intron 2 of 4) 50286 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr17-2897 chr17 40684888 40685098 + 12.7 0.000 Intergenic Intergenic 18759 NM_019016 192666 Hs.87383 NM_019016 ENSG00000167916 KRT24 K24|KA24 keratin 24 protein-coding chrX-869 chrX 153004725 153004935 + 12.7 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -10714 NM_001184924 114824 Hs.573567 NM_052926 ENSG00000198883 PNMA5 - PNMA family member 5 protein-coding chr4-1697 chr4 168550152 168550362 + 12.7 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) 53205 NM_016081 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr4-3021 chr4 128483939 128484149 + 12.7 0.000 intron (NR_125882, intron 6 of 8) intron (NR_125882, intron 6 of 8) 56028 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr2-8774 chr2 165241601 165241811 + 12.7 0.000 intron (NM_001371247, intron 1 of 26) intron (NM_001371247, intron 1 of 26) 646 NM_001371247 chr14-1402 chr14 55716084 55716294 + 12.7 0.000 Intergenic Intergenic -50056 NR_004844 645683 Hs.663461 NR_004844 ENSG00000177350 RPL13AP3 RPL13A_11_1370 ribosomal protein L13a pseudogene 3 pseudo chr15-1211 chr15 55627637 55627847 + 12.7 0.000 intron (NM_173814, intron 16 of 19) intron (NM_173814, intron 16 of 19) -38771 NM_015617 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr3-2181 chr3 188507616 188507826 + 12.7 0.000 intron (NM_001167672, intron 3 of 9) intron (NM_001167672, intron 3 of 9) 60945 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chrX-1043 chrX 105525899 105526109 + 12.7 0.000 intron (NM_017416, intron 6 of 10) intron (NM_017416, intron 6 of 10) -296535 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr1-5798 chr1 184057106 184057316 + 12.7 0.000 intron (NM_001363643, intron 3 of 3) intron (NM_001363643, intron 3 of 3) 5481 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr5-1295 chr5 10692321 10692531 + 12.7 0.000 intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 68808 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr7-5306 chr7 25296917 25297127 + 12.7 0.000 Intergenic Intergenic -68536 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr19-2462 chr19 1533003 1533213 + 12.7 0.000 intron (NM_001243079, intron 12 of 13) AluJb|SINE|Alu 9031 NM_001243079 126520 Hs.195352 NM_001011716 ENSG00000185988 PLK5 PLK-5|PLK5P|SgK384ps polo like kinase 5 protein-coding chr16-1313 chr16 88871657 88871867 + 12.7 0.000 Intergenic Intergenic -5102 NM_001080487 390748 Hs.730522 NM_001080487 ENSG00000205022 PABPN1L PABPNL1|ePABP2 poly(A) binding protein nuclear 1 like, cytoplasmic protein-coding chr1-4384 chr1 160869788 160869998 + 12.7 0.000 Intergenic AluJb|SINE|Alu -7006 NM_001166664 51744 Hs.157872 NM_016382 ENSG00000122223 CD244 2B4|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 molecule protein-coding chr15-289 chr15 40763963 40764173 + 12.7 0.000 promoter-TSS (NM_005258) promoter-TSS (NM_005258) 0 NM_005258 2644 Hs.631717 NM_005258 ENSG00000137880 GCHFR GFRP|HsT16933|P35 GTP cyclohydrolase I feedback regulator protein-coding chr14-1701 chr14 103803804 103804014 + 12.7 0.000 intron (NM_015316, intron 1 of 16) intron (NM_015316, intron 1 of 16) 43666 NM_015316 23368 Hs.709297 NM_015316 ENSG00000088808 PPP1R13B ASPP1|p53BP2-like|p85 protein phosphatase 1 regulatory subunit 13B protein-coding chr4-3035 chr4 135876486 135876696 + 12.7 0.000 intron (NR_103763, intron 1 of 2) intron (NR_103763, intron 1 of 2) 11502 NR_103762 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr16-4371 chr16 48235585 48235795 + 12.7 0.000 intron (NM_145186, intron 1 of 29) intron (NM_145186, intron 1 of 29) -3419 NM_033151 85320 Hs.652267 NM_032583 ENSG00000121270 ABCC11 EWWD|MRP8|WW ATP binding cassette subfamily C member 11 protein-coding chr15-897 chr15 35827310 35827520 + 12.7 0.000 intron (NR_038251, intron 2 of 2) intron (NR_038251, intron 2 of 2) -99441 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr3-2588 chr3 134211905 134212115 + 12.7 0.000 intron (NM_001005861, intron 2 of 14) intron (NM_001005861, intron 2 of 14) 38734 NM_001005861 6259 Hs.654562 NM_002958 ENSG00000163785 RYK D3S3195|JTK5|JTK5A|RYK1 receptor like tyrosine kinase protein-coding chr5-1404 chr5 145835133 145835343 + 12.7 0.000 exon (NM_182960, exon 1 of 8) exon (NM_182960, exon 1 of 8) 104 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr10-2016 chr10 68066082 68066292 + 12.7 0.000 intron (NM_001278185, intron 3 of 23) intron (NM_001278185, intron 3 of 23) 9096 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr4-2084 chr4 27311844 27312054 + 12.7 0.000 Intergenic Intergenic 94470 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr3-911 chr3 9915797 9916007 + 12.7 0.000 non-coding (NR_104198, exon 15 of 15) non-coding (NR_104198, exon 15 of 15) -1172 NM_001203264 84818 Hs.129959 NM_032732 ENSG00000163702 IL17RC CANDF9|IL17-RL|IL17RL interleukin 17 receptor C protein-coding chr6-2984 chr6 41177417 41177627 + 12.7 0.000 Intergenic Intergenic -14336 NM_018965 54209 Hs.435295 NM_018965 ENSG00000095970 TREM2 PLOSL2|TREM-2|Trem2a|Trem2b|Trem2c triggering receptor expressed on myeloid cells 2 protein-coding chr1-4188 chr1 44970614 44970824 + 12.7 0.000 intron (NM_001166588, intron 3 of 9) intron (NM_001166588, intron 3 of 9) 15876 NM_020365 8891 Hs.533549 NM_020365 ENSG00000070785 EIF2B3 EIF-2B|EIF2Bgamma eukaryotic translation initiation factor 2B subunit gamma protein-coding chr8-3818 chr8 28796252 28796462 + 12.7 0.000 intron (NR_026826, intron 7 of 14) intron (NR_026826, intron 7 of 14) 93558 NM_001172562 55756 Hs.162397 NM_018250 ENSG00000104299 INTS9 CPSF2L|INT9|RC74 integrator complex subunit 9 protein-coding chr4-2984 chr4 118474104 118474314 + 12.7 0.000 Intergenic L1MEc|LINE|L1 -42116 NR_003135 645455 Hs.408293 NM_153243 CEP170P1 CEP170L|FAM68B|KIAA0470L centrosomal protein 170 pseudogene 1 pseudo chr19-2538 chr19 42053725 42053935 + 12.7 0.000 exon (NM_001301030, exon 9 of 19) exon (NM_001301030, exon 9 of 19) 11975 NM_002088 2901 Hs.367799 NM_002088 ENSG00000105737 GRIK5 EAA2|GRIK2|GluK5|KA2 glutamate ionotropic receptor kainate type subunit 5 protein-coding chr20-543 chr20 51197144 51197354 + 12.7 0.000 Intergenic MER5A1|DNA|hAT-Charlie -174142 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr14-1079 chr14 105394846 105395056 + 12.7 0.000 3' UTR (NM_001100913, exon 25 of 25) 3' UTR (NM_001100913, exon 25 of 25) -3587 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding chr15-804 chr15 70741151 70741361 + 12.7 0.000 intron (NM_018003, intron 1 of 18) intron (NM_018003, intron 1 of 18) 22302 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr12-3485 chr12 122611366 122611576 + 12.7 0.000 intron (NM_014708, intron 53 of 63) intron (NM_014708, intron 53 of 63) 84222 NM_014708 9735 Hs.300559 NM_014708 ENSG00000184445 KNTC1 ROD kinetochore associated 1 protein-coding chr9-1847 chr9 686469 686679 + 12.7 0.000 promoter-TSS (NM_001354336) promoter-TSS (NM_001354336) -193 NM_001354335 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr10-3487 chr10 67912669 67912879 + 12.7 0.000 exon (NM_001314049, exon 6 of 7) exon (NM_001314049, exon 6 of 7) 21372 NM_001314049 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr4-2143 chr4 78298534 78298744 + 12.7 0.000 intron (NM_001166133, intron 14 of 41) MamRTE1|LINE|RTE-BovB 9654 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr6-1978 chr6 157977627 157977837 + 12.7 0.000 Intergenic Intergenic -4131 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr6-2163 chr6 18839249 18839459 + 12.7 0.000 Intergenic MIR3|SINE|MIR 267570 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr7-1725 chr7 6646817 6647027 + 12.7 0.000 intron (NM_001278559, intron 8 of 8) intron (NM_001278559, intron 8 of 8) 9604 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding chr9-2375 chr9 123389940 123390150 + 12.7 0.000 intron (NM_001352965, intron 18 of 20) intron (NM_001352965, intron 18 of 20) 12558 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr6-2134 chr6 5237185 5237395 + 12.7 0.000 intron (NM_020408, intron 1 of 2) MER1A|DNA|hAT-Charlie 23660 NR_134856 57128 Hs.387755 NM_020408 ENSG00000214113 LYRM4 C6orf149|CGI-203|COXPD19|ISD11 LYR motif containing 4 protein-coding chr2-6390 chr2 121132682 121132892 + 12.7 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 152415 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr1-4800 chr1 19949023 19949233 + 12.7 0.000 Intergenic LTR79|LTR|ERVL -25511 NM_014589 30814 Hs.272372 NM_014589 ENSG00000188784 PLA2G2E GIIE sPLA2|sPLA2-IIE phospholipase A2 group IIE protein-coding chr8-1436 chr8 122782921 122783131 + 12.7 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 1371 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr20-1067 chr20 29884475 29884685 + 12.7 0.000 Intergenic LTR5_Hs|LTR|ERVK -4117 NR_039688 100616184 NR_039688 ENSG00000276029 MIR4477A - microRNA 4477a ncRNA chr2-4709 chr2 231453999 231454209 + 12.7 0.000 3' UTR (NM_005381, exon 14 of 14) 3' UTR (NM_005381, exon 14 of 14) 1832 NR_002921 654321 Hs.674388 NR_002921 ENSG00000206885 SNORA75 SNORA75A|U23 small nucleolar RNA, H/ACA box 75 snoRNA chr17-1483 chr17 2095084 2095294 + 12.7 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -6428 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr6-4888 chr6 90662017 90662227 + 12.7 0.000 Intergenic Intergenic -75050 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr3-4540 chr3 127450854 127451064 + 12.7 0.000 Intergenic Intergenic -60289 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr5-1615 chr5 66209925 66210135 + 12.7 0.000 promoter-TSS (NR_146488) promoter-TSS (NR_146488) -584 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA chr20-1660 chr20 31942261 31942471 + 12.7 0.000 intron (NR_148013, intron 14 of 16) intron (NR_148013, intron 14 of 16) 9680 NM_030815 81572 Hs.435755 NM_030815 ENSG00000088356 PDRG1 C20orf126|PDRG p53 and DNA damage regulated 1 protein-coding chr2-3559 chr2 27098601 27098811 + 12.7 0.000 TTS (NM_001166240) TTS (NM_001166240) 11934 NM_000221 3795 Hs.567297 NM_000221 ENSG00000138030 KHK - ketohexokinase protein-coding chr9-2564 chr9 134214596 134214806 + 12.7 0.000 Intergenic Intergenic -50137 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr15-1685 chr15 57680338 57680548 + 12.7 0.000 intron (NM_001018091, intron 12 of 12) intron (NM_001018091, intron 12 of 12) -26078 NM_001018102 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr3-5754 chr3 21447742 21447952 + 12.7 0.000 intron (NM_024697, intron 4 of 7) intron (NM_024697, intron 4 of 7) 42121 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr1-2259 chr1 202144228 202144438 + 12.7 0.000 intron (NM_138795, intron 1 of 6) CpG 404 NM_138795 127829 Hs.497399 NM_138795 ENSG00000143862 ARL8A ARL10B|GIE2 ADP ribosylation factor like GTPase 8A protein-coding chr17-2128 chr17 21242291 21242501 + 12.7 0.000 3' UTR (NM_152914, exon 3 of 3) 3' UTR (NM_152914, exon 3 of 3) 11014 NM_152914 256302 Hs.654713 NM_152914 ENSG00000274180 NATD1 C17orf103|Gtlf3b N-acetyltransferase domain containing 1 protein-coding chr7-2202 chr7 101118341 101118551 + 12.7 0.000 Intergenic (AGAGAATG)n|Simple_repeat|Simple_repeat -8643 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr18-1073 chr18 36843779 36843989 + 12.7 0.000 intron (NR_136305, intron 3 of 9) intron (NR_136305, intron 3 of 9) -14668 NM_001271954 25941 Hs.436636 NM_015476 ENSG00000134779 TPGS2 C18orf10|HMFN0601|L17|PGs2 tubulin polyglutamylase complex subunit 2 protein-coding chr10-1518 chr10 43374896 43375106 + 12.7 0.000 intron (NM_173160, intron 5 of 8) intron (NM_173160, intron 5 of 8) 3357 NM_001184963 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr7-2384 chr7 42502187 42502397 + 12.7 0.000 Intergenic Intergenic 204155 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr22-1655 chr22 38754778 38754988 + 12.7 0.000 intron (NM_001199580, intron 1 of 18) intron (NM_001199580, intron 1 of 18) 583 NM_001199580 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr6-3057 chr6 69907878 69908088 + 12.7 0.000 intron (NM_001858, intron 4 of 50) intron (NM_001858, intron 4 of 50) 41427 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr10-3643 chr10 98338461 98338671 + 12.7 0.000 Intergenic MIRb|SINE|MIR 56741 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr5-5067 chr5 94693144 94693354 + 12.7 0.000 intron (NM_032290, intron 20 of 20) intron (NM_032290, intron 20 of 20) 74580 NM_032290 84250 Hs.657315 NM_032290 ENSG00000133302 SLF1 ANKRD32|BRCTD1|BRCTx SMC5-SMC6 complex localization factor 1 protein-coding chr19-3343 chr19 8324422 8324632 + 12.7 0.000 exon (NM_198471, exon 10 of 11) exon (NM_198471, exon 10 of 11) 3031 NM_001031 6234 Hs.153177 NM_001031 ENSG00000233927 RPS28 DBA15|S28|eS28 ribosomal protein S28 protein-coding chr1-3092 chr1 31934654 31934864 + 12.7 0.000 intron (NM_001369859, intron 1 of 6) intron (NM_001369859, intron 1 of 6) 3059 NM_001369858 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr10-3229 chr10 107770527 107770737 + 12.7 0.000 Intergenic L1PREC2|LINE|L1 298661 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr13-1934 chr13 85549918 85550128 + 12.7 0.000 Intergenic Intergenic 186420 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr11-3737 chr11 30996478 30996688 + 12.7 0.000 intron (NM_001367979, intron 20 of 38) MLT1A1|LTR|ERVL-MaLR -3897 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr4-5332 chr4 182867411 182867621 + 12.7 0.000 Intergenic Intergenic 49737 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr3-1880 chr3 129627924 129628134 + 12.7 0.000 Intergenic Intergenic -21290 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chrX-2034 chrX 16838310 16838520 + 12.7 0.000 intron (NM_001168683, intron 6 of 7) intron (NM_001168683, intron 6 of 7) 31448 NM_001198719 5931 Hs.495755 NM_002893 ENSG00000102054 RBBP7 RbAp46 RB binding protein 7, chromatin remodeling factor protein-coding chr5-6791 chr5 93658119 93658329 + 12.7 0.000 intron (NM_032042, intron 10 of 10) L4_C_Mam|LINE|RTE-X -37436 NR_031754 100313887 NR_031754 ENSG00000284336 MIR2277 mir-2277 microRNA 2277 ncRNA chrX-2044 chrX 17574401 17574611 + 12.7 0.000 intron (NR_135631, intron 1 of 1) L1PA6|LINE|L1 -15379 NR_046632 100873920 Hs.584577 NR_046632 NHS-AS1 - NHS antisense RNA 1 ncRNA chr18-2150 chr18 57277659 57277869 + 12.7 0.000 Intergenic Intergenic -74793 NM_015879 51046 Hs.23172 NM_015879 ENSG00000177511 ST8SIA3 SIAT8C|ST8SiaIII ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 protein-coding chr9-5222 chr9 75997394 75997604 + 12.7 0.000 intron (NR_120409, intron 3 of 19) intron (NR_120409, intron 3 of 19) 106826 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr8-1357 chr8 115563801 115564011 + 12.7 0.000 intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 104107 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr5-2517 chr5 158014074 158014284 + 12.7 0.000 Intergenic MamGypLTR3|LTR|Gypsy -155034 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr19-4535 chr19 8959742 8959952 + 12.7 0.000 exon (NM_024690, exon 3 of 84) exon (NM_024690, exon 3 of 84) 21495 NM_024690 94025 Hs.432676 NM_024690 ENSG00000181143 MUC16 CA125 mucin 16, cell surface associated protein-coding chr1-8436 chr1 95491121 95491331 + 12.7 0.000 Intergenic L2a|LINE|L2 16489 NR_033966 440594 Hs.514123 NR_033966 ENSG00000233907 LINC01761 - long intergenic non-protein coding RNA 1761 ncRNA chr12-2560 chr12 109625352 109625562 + 12.7 0.000 Intergenic Intergenic 51663 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr2-3385 chr2 23498877 23499087 + 12.7 0.000 intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 113803 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr1-6403 chr1 10973522 10973732 + 12.7 0.000 intron (NM_001170754, intron 2 of 12) MER52C|LTR|ERV1 -6940 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr19-1385 chr19 10914989 10915199 + 12.7 0.000 intron (NM_001370089, intron 6 of 14) intron (NM_001370089, intron 6 of 14) 13545 NM_001321439 78992 Hs.164026 NM_024029 ENSG00000130733 YIPF2 FinGER2 Yip1 domain family member 2 protein-coding chr15-762 chr15 70281839 70282049 + 12.7 0.000 Intergenic Intergenic -184027 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr5-3262 chr5 102826641 102826851 + 12.7 0.000 intron (NM_001364582, intron 1 of 24) intron (NM_001364582, intron 1 of 24) 18548 NM_001364582 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr11-1163 chr11 36289411 36289621 + 12.7 0.000 promoter-TSS (NM_014186) promoter-TSS (NM_014186) -92 NM_014186 29099 Hs.99443 NM_014186 ENSG00000110442 COMMD9 C11orf55|HSPC166|LINC00610 COMM domain containing 9 protein-coding chr4-3120 chr4 168766612 168766822 + 12.7 0.000 intron (NM_001166108, intron 10 of 21) MIRc|SINE|MIR -65378 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr11-4439 chr11 95280881 95281091 + 12.7 0.000 Intergenic Intergenic -48511 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr17-3790 chr17 39373220 39373430 + 12.7 0.000 intron (NM_001370209, intron 1 of 13) intron (NM_001370209, intron 1 of 13) 28301 NM_001184906 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr9-3163 chr9 115036014 115036224 + 12.7 0.000 exon (NM_002160, exon 21 of 28) exon (NM_002160, exon 21 of 28) 82038 NM_002160 3371 Hs.143250 NM_002160 ENSG00000041982 TNC 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C tenascin C protein-coding chr14-2390 chr14 51180381 51180591 + 12.7 0.000 Intergenic Intergenic -59761 NM_030755 81542 Hs.125221 NM_030755 ENSG00000139921 TMX1 PDIA11|TMX|TXNDC|TXNDC1 thioredoxin related transmembrane protein 1 protein-coding chr11-3851 chr11 73288977 73289187 + 12.7 0.000 intron (NM_001277207, intron 2 of 2) intron (NM_001277207, intron 2 of 2) 16940 NM_001277204 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr6-5008 chr6 109112781 109112991 + 12.7 0.000 intron (NM_001083535, intron 3 of 12) L1PA7|LINE|L1 -16418 NM_173830 285753 Hs.632616 NM_173830 ENSG00000183137 CEP57L1 C6orf182|bA487F23.2|cep57R centrosomal protein 57 like 1 protein-coding chr4-2176 chr4 102640713 102640923 + 12.7 0.000 intron (NM_005908, intron 13 of 16) intron (NM_005908, intron 13 of 16) 120150 NM_005908 4126 Hs.480415 NM_005908 ENSG00000109323 MANBA MANB1 mannosidase beta protein-coding chrX-230 chrX 17633351 17633561 + 12.7 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -2044 NM_001291868 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr5-2240 chr5 10756781 10756991 + 12.7 0.000 intron (NM_004394, intron 1 of 3) MER127|DNA|TcMar-Tigger 4348 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr8-2669 chr8 85094728 85094938 + 12.7 0.000 Intergenic L1PREC2|LINE|L1 -12405 NM_033402 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chr8-1769 chr8 54527480 54527690 + 12.7 0.000 Intergenic MER5B|DNA|hAT-Charlie 69650 NM_022454 64321 Hs.98367 NM_022454 ENSG00000164736 SOX17 VUR3 SRY-box transcription factor 17 protein-coding chr18-964 chr18 48494010 48494220 + 12.7 0.000 Intergenic Intergenic -44916 NM_014772 9811 Hs.145230 NM_014772 ENSG00000134030 CTIF Gm672|KIAA0427 cap binding complex dependent translation initiation factor protein-coding chr11-1750 chr11 124898310 124898520 + 12.7 0.000 promoter-TSS (NM_001301088) promoter-TSS (NM_001301088) -550 NM_019055 54538 Hs.524121 NM_019055 ENSG00000154133 ROBO4 ECSM4|MRB roundabout guidance receptor 4 protein-coding chr4-1799 chr4 20543254 20543464 + 12.7 0.000 intron (NM_001289135, intron 20 of 35) intron (NM_001289135, intron 20 of 35) 15084 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr3-1562 chr3 25664142 25664352 + 12.7 0.000 TTS (NR_039644) TTS (NR_039644) 125 NM_001068 7155 Hs.475733 NM_001068 ENSG00000077097 TOP2B TOPIIB|top2beta DNA topoisomerase II beta protein-coding chr3-2018 chr3 46078807 46079017 + 12.7 0.000 Intergenic ERV24_Prim-int|LTR|ERV1 -51429 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr17-1364 chr17 75667190 75667400 + 12.7 0.000 promoter-TSS (NM_004259) promoter-TSS (NM_004259) -43 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr14-2921 chr14 40543736 40543946 + 12.7 0.000 Intergenic L1PA16|LINE|L1 -410870 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr11-3253 chr11 73735234 73735444 + 12.7 0.000 intron (NM_198896, intron 1 of 7) intron (NM_198896, intron 1 of 7) 24754 NM_001243719 5870 Hs.503222 NM_002869 ENSG00000175582 RAB6A RAB6 RAB6A, member RAS oncogene family protein-coding chr4-4639 chr4 81066544 81066754 + 12.7 0.000 Intergenic Intergenic 35941 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr4-1789 chr4 6254298 6254508 + 12.7 0.000 Intergenic Intergenic -15447 NM_001145853 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr15-1529 chr15 62210121 62210331 + 12.7 0.000 Intergenic MER4B-int|LTR|ERV1 -6908 NR_148210 107984784 Hs.591131 NR_148210 ENSG00000259697 LOC107984784 - uncharacterized LOC107984784 ncRNA chr9-4467 chr9 28911645 28911855 + 12.7 0.000 intron (NM_001354574, intron 2 of 5) intron (NM_001354574, intron 2 of 5) -22795 NR_030618 100126316 NR_030618 ENSG00000215939 MIR873 MIRN873|hsa-mir-873|mir-873 microRNA 873 ncRNA chr4-1041 chr4 41143147 41143357 + 12.7 0.000 intron (NM_173075, intron 1 of 16) intron (NM_173075, intron 1 of 16) 71290 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr20-1577 chr20 3243746 3243956 + 12.7 0.000 Intergenic Intergenic -4661 NR_135000 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr3-4577 chr3 179918285 179918495 + 12.7 0.000 intron (NR_110061, intron 3 of 3) MIRb|SINE|MIR 18853 NR_110061 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr7-2050 chr7 117259611 117259821 + 12.7 0.000 Intergenic MamGypLTR3a|LTR|Gypsy 63342 NR_024047 7472 Hs.567356 NM_003391 ENSG00000105989 WNT2 INT1L1|IRP Wnt family member 2 protein-coding chr8-1105 chr8 57994482 57994692 + 12.7 0.000 promoter-TSS (NM_147189) promoter-TSS (NM_147189) 64 NM_147189 90362 Hs.154652 NM_147189 ENSG00000169122 FAM110B C8orf72 family with sequence similarity 110 member B protein-coding chr9-1196 chr9 113599822 113600032 + 12.7 0.000 Intergenic MIR1_Amn|SINE|MIR 5798 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr9-1461 chr9 25677634 25677844 + 12.7 0.000 exon (NM_001004125, exon 1 of 1) exon (NM_001004125, exon 1 of 1) 1119 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr1-10153 chr1 109049055 109049265 + 12.7 0.000 Intergenic AluJr|SINE|Alu -6932 NM_001142551 22911 Hs.570055 NM_014969 ENSG00000085433 WDR47 - WD repeat domain 47 protein-coding chr17-2332 chr17 54891279 54891489 + 12.7 0.000 Intergenic Intergenic -9307 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr15-1253 chr15 78374551 78374761 + 12.7 0.000 Intergenic L2c|LINE|L2 34303 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr10-4062 chr10 35005889 35006099 + 12.7 0.000 Intergenic L2b|LINE|L2 68289 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr4-3001 chr4 123299429 123299639 + 12.7 0.000 intron (NM_001345856, intron 15 of 15) intron (NM_001345856, intron 15 of 15) -97261 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr5-2207 chr5 172616114 172616324 + 12.7 0.000 Intergenic MIR|SINE|MIR -25044 NM_001308177 54492 Hs.91521 NM_001142651 ENSG00000214357 NEURL1B NEURL3|RNF67B|hNeur2|neur2 neuralized E3 ubiquitin protein ligase 1B protein-coding chr12-5153 chr12 101491285 101491495 + 12.7 0.000 Intergenic Intergenic 16054 NM_152323 121599 Hs.577097 NM_152323 ENSG00000166211 SPIC SPI-C Spi-C transcription factor protein-coding chr2-3464 chr2 146450645 146450855 + 12.7 0.000 Intergenic ERVL-E-int|LTR|ERVL -136307 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-3115 chr2 158414365 158414575 + 12.7 0.000 intron (NM_138803, intron 1 of 13) intron (NM_138803, intron 1 of 13) 42283 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr6-4419 chr6 28172120 28172330 + 12.7 0.000 Intergenic Intergenic 10464 NR_103448 651302 Hs.172143 NM_001145129 ENSG00000226314 ZNF192P1 ZNF389|ZNF389P|dJ265C24.4 zinc finger protein 192 pseudogene 1 pseudo chr3-3304 chr3 156445499 156445709 + 12.7 0.000 intron (NR_046618, intron 2 of 2) intron (NR_046618, intron 2 of 2) 1332 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr13-1123 chr13 24928253 24928463 + 12.7 0.000 TTS (NR_026730) TTS (NR_026730) -5497 NM_018451 55835 Hs.513379 NM_018451 ENSG00000151849 CENPJ BM032|CENP-J|CPAP|LAP|LIP1|MCPH6|SASS4|SCKL4|Sas-4 centromere protein J protein-coding chr13-469 chr13 42106174 42106384 + 12.7 0.000 intron (NM_178009, intron 1 of 29) AluSx|SINE|Alu -31763 NR_123715 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr12-1714 chr12 12804402 12804612 + 12.7 0.000 Intergenic Intergenic -8839 NM_016355 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr12-5010 chr12 81763579 81763789 + 12.7 0.000 Intergenic ERVL-int|LTR|ERVL -4334 NM_003625 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr18-1828 chr18 21979354 21979564 + 12.7 0.000 Intergenic Intergenic -148053 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA chr3-3364 chr3 42874739 42874949 + 12.7 0.000 exon (NM_004391, exon 1 of 1) exon (NM_004391, exon 1 of 1) 1035 NM_004391 1582 Hs.447793 NM_004391 ENSG00000180432 CYP8B1 CP8B|CYP12 cytochrome P450 family 8 subfamily B member 1 protein-coding chr14-1062 chr14 74334009 74334219 + 12.7 0.000 Intergenic Intergenic -14357 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr5-1426 chr5 424446 424656 + 12.7 0.000 intron (NM_001242412, intron 7 of 10) intron (NM_001242412, intron 7 of 10) 18609 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr7-3916 chr7 125715427 125715637 + 12.7 0.000 Intergenic L1PB1|LINE|L1 -451241 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr6-3192 chr6 129973532 129973742 + 12.7 0.000 Intergenic L2a|LINE|L2 -44732 NM_032438 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr3-5729 chr3 17489238 17489448 + 12.7 0.000 intron (NM_001349081, intron 2 of 21) intron (NM_001349081, intron 2 of 21) 210677 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr2-2629 chr2 82993575 82993785 + 12.7 0.000 Intergenic Intergenic 136877 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr15-1453 chr15 87752716 87752926 + 12.7 0.000 Intergenic Intergenic 175892 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr10-3604 chr10 91495544 91495754 + 12.7 0.000 intron (NM_182765, intron 14 of 20) intron (NM_182765, intron 14 of 20) 85364 NR_104291 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr14-2105 chr14 73801099 73801309 + 12.7 0.000 intron (NR_109995, intron 2 of 2) L2b|LINE|L2 13844 NR_109995 100506476 Hs.287299 NR_109995 LOC100506476 - uncharacterized LOC100506476 ncRNA chr3-2416 chr3 194967519 194967729 + 12.7 0.000 Intergenic Intergenic -126964 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr15-440 chr15 44288682 44288892 + 12.7 0.000 promoter-TSS (NM_138423) promoter-TSS (NM_138423) 68 NR_157849 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chr8-5391 chr8 25401958 25402168 + 12.7 0.000 intron (NM_024940, intron 47 of 51) intron (NM_024940, intron 47 of 51) 22198 NM_001083111 2796 Hs.82963 NM_000825 ENSG00000147437 GNRH1 GNRH|GRH|LHRH|LNRH gonadotropin releasing hormone 1 protein-coding chr4-600 chr4 147731628 147731838 + 12.7 0.000 promoter-TSS (NM_024605) promoter-TSS (NM_024605) -355 NM_024605 79658 Hs.368631 NM_024605 ENSG00000071205 ARHGAP10 GRAF2|PS-GAP|PSGAP Rho GTPase activating protein 10 protein-coding chr6-4943 chr6 101296835 101297045 + 12.7 0.000 Intergenic Intergenic -102045 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr4-4316 chr4 30836333 30836543 + 12.7 0.000 intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 116069 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr7-1602 chr7 770457 770667 + 12.7 0.000 exon (NM_017802, exon 9 of 13) exon (NM_017802, exon 9 of 13) -42886 NM_001164758 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chrX-381 chrX 41334177 41334387 + 12.7 0.000 exon (NM_001193416, exon 1 of 17) exon (NM_001193416, exon 1 of 17) 116 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chrX-965 chrX 112494138 112494348 + 12.7 0.000 Intergenic L1MA3|LINE|L1 185695 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr17-850 chr17 31859034 31859244 + 12.7 0.000 promoter-TSS (NM_001330176) promoter-TSS (NM_001330176) 105 NM_018405 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr10-3528 chr10 73310598 73310808 + 12.7 0.000 intron (NM_001367801, intron 12 of 27) L2c|LINE|L2 48051 NM_001350934 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding chr10-2535 chr10 58157471 58157681 + 12.7 0.000 Intergenic Intergenic 110318 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr3-2651 chr3 15798016 15798226 + 12.7 0.000 promoter-TSS (NR_146112) promoter-TSS (NR_146112) 63 NM_001195098 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr9-2756 chr9 104074970 104075180 + 12.7 0.000 Intergenic Intergenic 17399 NR_121580 101928550 Hs.144722 NR_121580 ENSG00000270332 SMC2-AS1 - SMC2 antisense RNA 1 (head to head) ncRNA chr21-1172 chr21 42380618 42380828 + 12.7 0.000 intron (NM_032404, intron 6 of 9) intron (NM_032404, intron 6 of 9) 8426 NM_032404 64699 Hs.208600 NM_024022 ENSG00000160183 TMPRSS3 DFNB10|DFNB8|ECHOS1|TADG12 transmembrane serine protease 3 protein-coding chr1-10097 chr1 96075059 96075269 + 12.7 0.000 Intergenic Intergenic 83096 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr14-954 chr14 52112408 52112618 + 12.7 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -43454 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr13-1026 chr13 50409528 50409738 + 12.7 0.000 intron (NR_109974, intron 3 of 6) intron (NR_109974, intron 3 of 6) 117816 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr22-566 chr22 41621008 41621218 + 12.7 0.000 promoter-TSS (NM_001469) promoter-TSS (NM_001469) -50 NM_001288978 2547 Hs.292493 NM_001469 ENSG00000196419 XRCC6 CTC75|CTCBF|G22P1|KU70|ML8|TLAA X-ray repair cross complementing 6 protein-coding chr8-1498 chr8 52008541 52008751 + 12.7 0.000 Intergenic Intergenic -109460 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr8-1647 chr8 134831461 134831671 + 12.7 0.000 Intergenic CpG -6503 NR_126028 552853 Hs.575612 NR_126028 ENSG00000253433 NCRNA00250 C8orf24 non-protein coding RNA 250 ncRNA chr12-4494 chr12 20734396 20734606 + 12.7 0.000 intron (NM_017435, intron 10 of 14) MIRc|SINE|MIR 39036 NM_017435 53919 Hs.47261 NM_017435 ENSG00000139155 SLCO1C1 OATP-F|OATP1|OATP14|OATP1C1|OATPF|OATPRP5|SLC21A14 solute carrier organic anion transporter family member 1C1 protein-coding chr11-1863 chr11 120432205 120432415 + 12.7 0.000 intron (NM_015313, intron 11 of 40) intron (NM_015313, intron 11 of 40) 46983 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr3-3348 chr3 16060379 16060589 + 12.7 0.000 Intergenic Intergenic -114196 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr17-1095 chr17 60142186 60142396 + 12.7 0.000 Intergenic AluSx|SINE|Alu -7682 NM_000717 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr8-3958 chr8 48313849 48314059 + 12.7 0.000 Intergenic (TGTATG)n|Simple_repeat|Simple_repeat -237613 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr11-4432 chr11 94348688 94348898 + 12.7 0.000 Intergenic HERVH-int|LTR|ERV1 43156 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr9-2827 chr9 125549733 125549943 + 12.7 0.000 intron (NM_001006619, intron 6 of 10) intron (NM_001006619, intron 6 of 10) 157370 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr11-7856 chr11 117983130 117983340 + 12.7 0.000 Intergenic Intergenic -3156 NM_001558 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding chr19-893 chr19 14381216 14381426 + 12.7 0.000 promoter-TSS (NM_078481) promoter-TSS (NM_078481) -123 NM_078481 976 Hs.466039 NM_001784 ENSG00000123146 ADGRE5 CD97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding chr5-4699 chr5 39891855 39892065 + 12.7 0.000 Intergenic Intergenic -160331 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr19-2726 chr19 33828423 33828633 + 12.7 0.000 Intergenic L2a|LINE|L2 31658 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr3-2997 chr3 100159745 100159955 + 12.7 0.000 intron (NM_001167924, intron 2 of 9) intron (NM_001167924, intron 2 of 9) -25974 NR_028357 644444 Hs.652353 NR_028357 ENSG00000235156 TMEM30CP CDC50C|TMEM30C transmembrane protein 30C, pseudogene pseudo chrY-15 chrY 11293875 11294085 + 12.7 0.000 Intergenic AluYj4|SINE|Alu 1127610 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr13-1198 chr13 49328105 49328315 + 12.7 0.000 intron (NM_001079670, intron 10 of 10) L1ME3Cz|LINE|L1 73332 NM_030925 81617 Hs.87159 NM_030925 ENSG00000102547 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39 like protein-coding chr5-2691 chr5 67537616 67537826 + 12.7 0.000 Intergenic Intergenic 109068 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr4-1922 chr4 74842520 74842730 + 12.7 0.000 Intergenic Intergenic -48102 NM_001316963 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr5-2023 chr5 54520575 54520785 + 12.7 0.000 3' UTR (NM_052870, exon 1 of 1) 3' UTR (NM_052870, exon 1 of 1) 2921 NM_001102575 112574 Hs.432755 NM_052870 ENSG00000178996 SNX18 SH3PX2|SH3PXD3B|SNAG1 sorting nexin 18 protein-coding chr12-2789 chr12 75447032 75447242 + 12.7 0.000 Intergenic Intergenic -33618 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr12-3385 chr12 102294191 102294401 + 12.7 0.000 Intergenic AluJb|SINE|Alu -96463 NM_002674 5367 Hs.707990 NM_002674 ENSG00000183395 PMCH MCH|ppMCH pro-melanin concentrating hormone protein-coding chr1-4429 chr1 226224032 226224242 + 12.7 0.000 intron (NM_031944, intron 1 of 1) CpG 473 NM_001282402 83881 Hs.282079 NM_031944 ENSG00000185155 MIXL1 MILD1|MIX|MIXL Mix paired-like homeobox protein-coding chr22-2586 chr22 29517635 29517845 + 12.7 0.000 intron (NM_001002879, intron 15 of 19) intron (NM_001002879, intron 15 of 19) 35915 NM_001002879 8563 Hs.75361 NM_003678 ENSG00000100296 THOC5 C22orf19|Fmip|PK1.3|fSAP79 THO complex 5 protein-coding chr3-1497 chr3 122940999 122941209 + 12.7 0.000 intron (NR_046079, intron 4 of 22) L4_A_Mam|LINE|RTE-X 35030 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr17-1435 chr17 6755825 6756035 + 12.7 0.000 promoter-TSS (NM_001353137) promoter-TSS (NM_001353137) -116 NR_046398 54739 Hs.441975 NM_017523 ENSG00000132530 XAF1 BIRC4BP|HSXIAPAF1|XIAPAF1 XIAP associated factor 1 protein-coding chr1-3232 chr1 183881910 183882120 + 12.7 0.000 intron (NM_001297669, intron 6 of 18) intron (NM_001297669, intron 6 of 18) 76895 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr12-5112 chr12 96577181 96577391 + 12.7 0.000 intron (NM_001306084, intron 20 of 67) intron (NM_001306084, intron 20 of 67) 87709 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr19-1744 chr19 2225552 2225762 + 12.7 0.000 intron (NM_032482, intron 26 of 27) intron (NM_032482, intron 26 of 27) 8492 NR_031596 100302283 NR_031596 ENSG00000221411 MIR1227 MIRN1227|hsa-mir-1227|mir-1227 microRNA 1227 ncRNA chr6-1592 chr6 35342397 35342607 + 12.7 0.000 promoter-TSS (NM_001171819) promoter-TSS (NM_001171819) -56 NM_001171819 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr20-2011 chr20 56827227 56827437 + 12.7 0.000 Intergenic Intergenic 198026 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr13-506 chr13 95644686 95644896 + 12.7 0.000 promoter-TSS (NM_198968) promoter-TSS (NM_198968) -85 NM_014934 22873 Hs.656580 NM_014934 ENSG00000134874 DZIP1 DZIP|DZIPt1 DAZ interacting zinc finger protein 1 protein-coding chr16-1640 chr16 11313243 11313453 + 12.7 0.000 Intergenic L1ME4b|LINE|L1 -6821 NR_031678 100313773 NR_031678 ENSG00000221801 MIR548H2 MIR548H-2|MIRN548H2 microRNA 548h-2 ncRNA chr1-6543 chr1 28798483 28798693 + 12.7 0.000 Intergenic Intergenic -13582 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chrX-777 chrX 42399539 42399749 + 12.7 0.000 Intergenic Intergenic 378519 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr12-3116 chr12 28632863 28633073 + 12.7 0.000 Intergenic Intergenic -442230 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr14-899 chr14 55052747 55052957 + 12.7 0.000 intron (NM_144578, intron 1 of 3) intron (NM_144578, intron 1 of 3) 1205 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding chr4-1451 chr4 127400808 127401018 + 12.7 0.000 Intergenic Intergenic -232044 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr3-1430 chr3 11288994 11289204 + 12.7 0.000 intron (NM_001349234, intron 2 of 19) intron (NM_001349234, intron 2 of 19) 16702 NM_001349232 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr17-1971 chr17 27534280 27534490 + 12.7 0.000 intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 62421 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr16-1739 chr16 70746690 70746900 + 12.7 0.000 intron (NM_001351157, intron 11 of 17) intron (NM_001351157, intron 11 of 17) -8300 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr2-3617 chr2 108271104 108271314 + 12.7 0.000 Intergenic LTR16A2|LTR|ERVL -17686 NM_176825 6819 Hs.436123 NM_001056 ENSG00000198203 SULT1C2 ST1C1|ST1C2|SULT1C1|humSULTC2 sulfotransferase family 1C member 2 protein-coding chr12-2338 chr12 3186721 3186931 + 12.7 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 109447 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr16-555 chr16 57535936 57536146 + 12.7 0.000 intron (NM_033212, intron 1 of 8) CpG 530 NM_033212 92922 Hs.644611 NM_033212 ENSG00000135736 CCDC102A - coiled-coil domain containing 102A protein-coding chr5-1544 chr5 16995327 16995537 + 12.7 0.000 Intergenic Intergenic -59144 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr13-2278 chr13 28358283 28358493 + 12.7 0.000 intron (NM_002019, intron 14 of 29) MIR|SINE|MIR 136740 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr12-4842 chr12 57640943 57641153 + 12.7 0.000 Intergenic MER4A1|LTR|ERV1 -7809 NM_001276469 2583 Hs.159481 NM_001478 ENSG00000135454 B4GALNT1 GALGT|GALNACT|GalNAc-T|SPG26 beta-1,4-N-acetyl-galactosaminyltransferase 1 protein-coding chr17-4092 chr17 80409119 80409329 + 12.7 0.000 intron (NR_029376, intron 1 of 1) Harlequin-int|LTR|ERV1 -5943 NM_001164637 284131 Hs.389678 NM_173627 ENSG00000173818 ENDOV - endonuclease V protein-coding chr10-3424 chr10 35770167 35770377 + 12.7 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger -8030 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr3-5271 chr3 116177129 116177339 + 12.7 0.000 intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) -182790 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA chr2-1686 chr2 127589394 127589604 + 12.7 0.000 intron (NM_001080527, intron 15 of 46) intron (NM_001080527, intron 15 of 46) -18537 NR_132317 105373609 Hs.677195 NR_132317 LOC105373609 - uncharacterized LOC105373609 ncRNA chr8-1484 chr8 38210736 38210946 + 12.7 0.000 3' UTR (NM_001204878, exon 4 of 4) 3' UTR (NM_001204878, exon 4 of 4) -20650 NM_001164234 23259 Hs.434966 NM_015214 ENSG00000085788 DDHD2 SAMWD1|SPG54|iPLA(1)gamma DDHD domain containing 2 protein-coding chr9-2888 chr9 132727947 132728157 + 12.7 0.000 intron (NM_001317959, intron 13 of 14) intron (NM_001317959, intron 13 of 14) 57588 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr12-1538 chr12 89017345 89017555 + 12.7 0.000 intron (NR_038385, intron 1 of 2) intron (NR_038385, intron 1 of 2) 2242 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr4-3381 chr4 23019747 23019957 + 12.7 0.000 Intergenic Intergenic 305763 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr4-1325 chr4 146592181 146592391 + 12.7 0.000 Intergenic Intergenic -46607 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr1-4801 chr1 20038671 20038881 + 12.7 0.000 Intergenic AluJo|SINE|Alu -31418 NM_000929 5322 Hs.319438 NM_000929 ENSG00000127472 PLA2G5 FRFB|GV-PLA2|PLA2-10|hVPLA(2) phospholipase A2 group V protein-coding chr15-3260 chr15 76096306 76096516 + 12.7 0.000 intron (NM_152335, intron 1 of 10) L1PA7|LINE|L1 36426 NM_152335 123591 Hs.661411 NM_152335 ENSG00000169758 TMEM266 C15orf27|HVRP1|HsHVRP1|hTMEM266 transmembrane protein 266 protein-coding chr8-3817 chr8 28599391 28599601 + 12.7 0.000 Intergenic Intergenic -94314 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr15-2747 chr15 101410722 101410932 + 12.7 0.000 intron (NM_138325, intron 6 of 13) MIRb|SINE|MIR 76390 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr5-5324 chr5 128442773 128442983 + 12.7 0.000 intron (NM_001999, intron 7 of 64) intron (NM_001999, intron 7 of 64) 95367 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr11-3774 chr11 59221578 59221788 + 12.7 0.000 Intergenic L2c|LINE|L2 -8756 NM_001039396 219972 Hs.744920 NM_001039396 ENSG00000197629 MPEG1 MPG1|MPS1|Mpg-1|P-2 macrophage expressed 1 protein-coding chr19-1852 chr19 16038084 16038294 + 12.7 0.000 intron (NR_110321, intron 4 of 4) intron (NR_110321, intron 4 of 4) 4069 NR_110321 148231 Hs.631621 NR_024335 ENSG00000167459 LINC00905 - long intergenic non-protein coding RNA 905 ncRNA chr7-3203 chr7 128692933 128693143 + 12.7 0.000 Intergenic Intergenic -16023 NR_104243 84691 Hs.732440 NM_032599 ENSG00000135248 FAM71F1 FAM137A|NYD-SP18 family with sequence similarity 71 member F1 protein-coding chr4-2916 chr4 87733848 87734058 + 12.7 0.000 Intergenic L2b|LINE|L2 -65601 NM_004967 3381 Hs.518726 NM_004967 ENSG00000029559 IBSP BNSP|BSP|BSP-II|SP-II integrin binding sialoprotein protein-coding chr11-3886 chr11 101064919 101065129 + 12.7 0.000 intron (NR_073142, intron 2 of 6) Tigger3a|DNA|TcMar-Tigger 64039 NM_001271161 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr22-1810 chr22 34086285 34086495 + 12.7 0.000 Intergenic Intergenic -163502 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chrX-2581 chrX 104460810 104461020 + 12.7 0.000 Intergenic Intergenic -105284 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chrX-2081 chrX 21608134 21608344 + 12.7 0.000 intron (NM_001168648, intron 19 of 20) intron (NM_001168648, intron 19 of 20) 50091 NM_153270 257240 Hs.448572 NM_153270 ENSG00000185915 KLHL34 - kelch like family member 34 protein-coding chr1-6431 chr1 15937826 15938036 + 12.7 0.000 exon (NM_015001, exon 13 of 15) exon (NM_015001, exon 13 of 15) 38201 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr8-3393 chr8 61657838 61658048 + 12.7 0.000 intron (NM_032468, intron 4 of 14) intron (NM_032468, intron 4 of 14) 31868 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr4-3110 chr4 161348217 161348427 + 12.7 0.000 Intergenic L1PREC2|LINE|L1 -674411 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr5-6591 chr5 28471922 28472132 + 12.7 0.000 Intergenic Intergenic -184362 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chrX-2896 chrX 149401288 149401498 + 12.7 0.000 Intergenic L1PB1|LINE|L1 103913 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr3-3938 chr3 49998156 49998366 + 12.7 0.000 intron (NM_001349190, intron 4 of 18) intron (NM_001349190, intron 4 of 18) 58111 NM_001349190 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr9-3204 chr9 132609931 132610141 + 12.7 0.000 intron (NR_136309, intron 18 of 18) intron (NR_136309, intron 18 of 18) 27430 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr17-1434 chr17 6639417 6639627 + 12.7 0.000 intron (NR_147088, intron 1 of 17) intron (NR_147088, intron 1 of 17) 1189 NM_014804 9851 Hs.28070 NM_014804 ENSG00000198920 KIAA0753 MNR|OFIP KIAA0753 protein-coding chr2-1043 chr2 84971403 84971613 + 12.7 0.000 intron (NM_020122, intron 1 of 6) CpG 347 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr2-3949 chr2 64637191 64637401 + 12.7 0.000 intron (NM_014755, intron 1 of 1) intron (NM_014755, intron 1 of 1) 16617 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr5-3148 chr5 66680108 66680318 + 12.7 0.000 intron (NM_001290228, intron 1 of 4) intron (NM_001290228, intron 1 of 4) 83820 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr18-1911 chr18 33130717 33130927 + 12.7 0.000 intron (NM_001308126, intron 20 of 23) MamTip3|DNA|hAT-Tip100 309749 NM_001371121 chr10-2133 chr10 24774028 24774238 + 12.7 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -50246 NM_020824 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr8-1417 chr8 71831432 71831642 + 12.7 0.000 Intergenic L2c|LINE|L2 -11586 NR_033652 100132891 Hs.137674 NR_033651 ENSG00000235531 MSC-AS1 - MSC antisense RNA 1 ncRNA chr18-2249 chr18 70171712 70171922 + 12.7 0.000 intron (NM_173630, intron 11 of 48) MER5A1|DNA|hAT-Charlie 33870 NM_173630 25914 Hs.654809 NM_173630 ENSG00000176225 RTTN MSSP rotatin protein-coding chr3-5657 chr3 12160582 12160792 + 12.7 0.000 intron (NM_133625, intron 5 of 12) MIR3|SINE|MIR -1775 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr16-2349 chr16 52941608 52941818 + 12.7 0.000 Intergenic Intergenic 111160 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr5-3427 chr5 151020287 151020497 + 12.7 0.000 promoter-TSS (NM_001329790) promoter-TSS (NM_001329790) -199 NM_001329790 2878 Hs.386793 NM_002084 ENSG00000211445 GPX3 GPx-P|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding chr14-1519 chr14 54157094 54157304 + 12.7 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -200308 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr3-5556 chr3 4298993 4299203 + 12.7 0.000 Intergenic Intergenic -4206 NM_001320677 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr4-1073 chr4 125920010 125920220 + 12.7 0.000 Intergenic Intergenic 412856 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr1-4230 chr1 179177274 179177484 + 12.7 0.000 intron (NM_007314, intron 1 of 11) intron (NM_007314, intron 1 of 11) -34303 NM_005158 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr7-1342 chr7 40815479 40815689 + 12.7 0.000 intron (NM_024728, intron 14 of 14) L1PA16|LINE|L1 164355 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr4-2578 chr4 100190832 100191042 + 12.7 0.000 promoter-TSS (NM_145244) promoter-TSS (NM_145244) -469 NM_145244 115265 Hs.480378 NM_145244 ENSG00000145358 DDIT4L REDD2|Rtp801L DNA damage inducible transcript 4 like protein-coding chr12-1432 chr12 67483934 67484144 + 12.7 0.000 Intergenic Intergenic -36043 NR_103861 100507175 Hs.505986 NR_103861 ENSG00000203585 LINC02408 - long intergenic non-protein coding RNA 2408 ncRNA chr19-1997 chr19 13037189 13037399 + 12.7 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 12515 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr9-5262 chr9 79605548 79605758 + 12.7 0.000 intron (NM_001282760, intron 5 of 20) intron (NM_001282760, intron 5 of 20) 32476 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr6-4386 chr6 24052048 24052258 + 12.7 0.000 Intergenic Intergenic -74062 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr12-1865 chr12 51993137 51993347 + 12.7 0.000 intron (NM_004302, intron 8 of 8) intron (NM_004302, intron 8 of 8) -13704 NM_181711 160622 Hs.407202 NM_181711 ENSG00000161835 GRASP TAMALIN general receptor for phosphoinositides 1 associated scaffold protein protein-coding chr12-1081 chr12 47904873 47905083 + 12.7 0.000 promoter-TSS (NM_001017536) promoter-TSS (NM_001017536) 16 NM_000376 7421 Hs.524368 NM_000376 ENSG00000111424 VDR NR1I1|PPP1R163 vitamin D receptor protein-coding chr12-1785 chr12 116860131 116860341 + 12.7 0.000 non-coding (NR_073189, exon 5 of 5) non-coding (NR_073189, exon 5 of 5) 21205 NR_073189 8739 Hs.26605 NM_003806 ENSG00000135116 HRK DP5|HARAKIRI harakiri, BCL2 interacting protein protein-coding chr6-4294 chr6 14090165 14090375 + 12.7 0.000 Intergenic Intergenic -26986 NM_001251901 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr4-936 chr4 60683479 60683689 + 12.7 0.000 Intergenic Intergenic -239035 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr6-2356 chr6 132593691 132593901 + 12.7 0.000 Intergenic Intergenic -4058 NM_003967 9038 Hs.248198 NM_003967 ENSG00000135569 TAAR5 PNR trace amine associated receptor 5 protein-coding chr2-9284 chr2 221795783 221795993 + 12.7 0.000 Intergenic Intergenic -221686 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr17-4552 chr17 79416320 79416530 + 12.7 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 99723 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-2909 chr1 15801231 15801441 + 12.7 0.000 Intergenic L2b|LINE|L2 6363 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL - ubiquinol-cytochrome c reductase hinge protein like protein-coding chr7-2702 chr7 25116810 25117020 + 12.7 0.000 Intergenic Intergenic 8446 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr9-2181 chr9 131407839 131408049 + 12.7 0.000 Intergenic Intergenic -22146 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr12-2088 chr12 24838590 24838800 + 12.7 0.000 intron (NM_001178091, intron 6 of 9) intron (NM_001178091, intron 6 of 9) 63527 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr7-5673 chr7 65316256 65316466 + 12.7 0.000 Intergenic Intergenic -57438 NM_001287532 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr16-2566 chr16 74842039 74842249 + 12.7 0.000 Intergenic AluJo|SINE|Alu -67324 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr22-1357 chr22 28304479 28304689 + 12.7 0.000 intron (NM_001145418, intron 3 of 22) intron (NM_001145418, intron 3 of 22) -155285 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr3-5731 chr3 17928263 17928473 + 12.7 0.000 Intergenic Intergenic -34184 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr6-1494 chr6 111478770 111478980 + 12.7 0.000 intron (NM_001286431, intron 2 of 34) intron (NM_001286431, intron 2 of 34) -4597 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr5-3720 chr5 19497874 19498084 + 12.7 0.000 intron (NM_001349559, intron 11 of 12) LTR40a|LTR|ERVL 388293 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr11-420 chr11 71448388 71448598 + 12.7 0.000 promoter-TSS (NM_001163817) promoter-TSS (NM_001163817) -62 NM_001360 1717 Hs.503134 NM_001360 ENSG00000172893 DHCR7 SLOS 7-dehydrocholesterol reductase protein-coding chr11-2497 chr11 66328298 66328508 + 12.7 0.000 Intergenic Intergenic 8031 NM_001363560 9610 Hs.1030 NM_004292 ENSG00000174791 RIN1 - Ras and Rab interactor 1 protein-coding chr17-1761 chr17 19385005 19385215 + 12.7 0.000 exon (NM_002404, exon 5 of 6) exon (NM_002404, exon 5 of 6) 2080 NM_002404 4239 Hs.296049 NM_002404 ENSG00000166482 MFAP4 - microfibril associated protein 4 protein-coding chr2-4352 chr2 241204665 241204875 + 12.7 0.000 intron (NM_001370694, intron 9 of 24) intron (NM_001370694, intron 9 of 24) 16093 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr4-2977 chr4 115953041 115953251 + 12.7 0.000 Intergenic Harlequin-int|LTR|ERV1 -346579 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr3-3621 chr3 100710160 100710370 + 12.7 0.000 intron (NM_006070, intron 1 of 7) intron (NM_006070, intron 1 of 7) 723 NM_001195478 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr17-4896 chr17 72503195 72503405 + 12.7 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 89504 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr13-1424 chr13 40984862 40985072 + 12.7 0.000 intron (NM_001370329, intron 1 of 9) intron (NM_001370329, intron 1 of 9) -2068 NM_001370331 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr9-1673 chr9 68845093 68845303 + 12.7 0.000 intron (NM_003558, intron 4 of 15) intron (NM_003558, intron 4 of 15) 65133 NM_138333 116224 Hs.655572 NM_138333 ENSG00000187866 FAM122A C9orf42 family with sequence similarity 122A protein-coding chr4-2275 chr4 186068648 186068858 + 12.7 0.000 promoter-TSS (NM_003265) promoter-TSS (NM_003265) -402 NM_003265 7098 Hs.657724 NM_003265 ENSG00000164342 TLR3 CD283|IIAE2 toll like receptor 3 protein-coding chr8-2342 chr8 22063296 22063506 + 12.7 0.000 intron (NM_001114138, intron 1 of 14) L2b|LINE|L2 -3115 NM_001323381 2039 Hs.106124 NM_001978 ENSG00000158856 DMTN DMT|EPB49 dematin actin binding protein protein-coding chr12-2575 chr12 113222988 113223198 + 12.7 0.000 intron (NM_017901, intron 1 of 27) intron (NM_017901, intron 1 of 27) 1629 NM_001143819 53373 Hs.524763 NM_017901 ENSG00000186815 TPCN1 TPC1 two pore segment channel 1 protein-coding chr22-2081 chr22 17556634 17556844 + 12.7 0.000 3' UTR (NM_001290047, exon 19 of 19) 3' UTR (NM_001290047, exon 19 of 19) -6700 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr1-3313 chr1 9825576 9825786 + 12.7 0.000 Intergenic Intergenic -1155 NM_001009566 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr9-2592 chr9 137494324 137494534 + 12.7 0.000 intron (NM_001098537, intron 19 of 34) intron (NM_001098537, intron 19 of 34) -35095 NM_015537 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr10-3305 chr10 1034762 1034972 + 12.7 0.000 intron (NR_024629, intron 1 of 2) intron (NR_024629, intron 1 of 2) -9008 NM_033261 91734 Hs.9270 NM_033261 ENSG00000148377 IDI2 IPPI2 isopentenyl-diphosphate delta isomerase 2 protein-coding chr7-5742 chr7 74037923 74038133 + 12.7 0.000 intron (NM_001278913, intron 4 of 28) intron (NM_001278913, intron 4 of 28) 9855 NM_001278916 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr17-4605 chr17 4521097 4521307 + 12.7 0.000 intron (NM_001124758, intron 2 of 12) intron (NM_001124758, intron 2 of 12) 22321 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr4-1575 chr4 4660105 4660315 + 12.7 0.000 intron (NR_037888, intron 4 of 5) intron (NR_037888, intron 4 of 5) -4116 NR_145783 109623454 NR_145783 SNORD162 - small nucleolar RNA, C/D box 162 snoRNA chr14-1943 chr14 24436723 24436933 + 12.7 0.000 intron (NM_001290256, intron 7 of 7) intron (NM_001290256, intron 7 of 7) 5973 NM_020195 56948 Hs.643552 NM_020195 ENSG00000100445 SDR39U1 C14orf124|HCDI short chain dehydrogenase/reductase family 39U member 1 protein-coding chr2-6956 chr2 120841547 120841757 + 12.7 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 49371 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2-2915 chr2 236240465 236240675 + 12.7 0.000 intron (NM_212556, intron 2 of 5) intron (NM_212556, intron 2 of 5) 23775 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr16-3847 chr16 66695444 66695654 + 12.7 0.000 intron (NM_181521, intron 1 of 3) intron (NM_181521, intron 1 of 3) 1194 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr5-5024 chr5 84508902 84509112 + 12.7 0.000 Intergenic MER70B|LTR|ERVL -124127 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr7-4397 chr7 94375728 94375938 + 12.7 0.000 intron (NR_147206, intron 5 of 5) intron (NR_147206, intron 5 of 5) 16359 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr1-3207 chr1 156870964 156871174 + 12.7 0.000 intron (NM_002529, intron 6 of 16) Tigger15a|DNA|TcMar-Tigger 10190 NM_002529 4914 Hs.406293 NM_002529 ENSG00000198400 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic receptor tyrosine kinase 1 protein-coding chr11-3372 chr11 125124216 125124426 + 12.7 0.000 Intergenic Intergenic -12558 NR_047587 219854 Hs.7626 NM_001080546 ENSG00000150433 TMEM218 - transmembrane protein 218 protein-coding chr14-1127 chr14 102193324 102193534 + 12.7 0.000 intron (NM_001353659, intron 1 of 1) MIRc|SINE|MIR 41997 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr12-4632 chr12 43439076 43439286 + 12.7 0.000 intron (NM_025003, intron 18 of 38) intron (NM_025003, intron 18 of 38) 113022 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr2-8331 chr2 108079580 108079790 + 12.7 0.000 Intergenic Intergenic -26930 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA chr8-1600 chr8 142753979 142754189 + 12.7 0.000 Intergenic MIRb|SINE|MIR -1552 NM_205545 137797 Hs.441280 NM_205545 ENSG00000197353 LYPD2 LYPDC2|UNQ430 LY6/PLAUR domain containing 2 protein-coding chr6-1630 chr6 106591562 106591772 + 12.7 0.000 intron (NM_032730, intron 6 of 8) intron (NM_032730, intron 6 of 8) 37831 NM_032730 84816 Hs.155839 NM_032730 ENSG00000130347 RTN4IP1 NIMP|OPA10 reticulon 4 interacting protein 1 protein-coding chr16-1393 chr16 85385858 85386068 + 12.7 0.000 Intergenic Intergenic -79638 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr12-2117 chr12 65169530 65169740 + 12.7 0.000 promoter-TSS (NM_001167614) promoter-TSS (NM_001167614) 52 NM_001167614 23592 Hs.744150 NM_014319 ENSG00000174106 LEMD3 MAN1 LEM domain containing 3 protein-coding chr8-4495 chr8 119334122 119334332 + 12.7 0.000 Intergenic ERVL-E-int|LTR|ERVL 9056 NR_106755 102466162 NR_106755 ENSG00000276479 MIR548AZ hsa-mir-548az microRNA 548az ncRNA chr19-3142 chr19 19410572 19410782 + 12.7 0.000 intron (NM_001359631, intron 1 of 10) intron (NM_001359631, intron 1 of 10) -24386 NR_030370 693225 NR_030370 ENSG00000207821 MIR640 MIRN640|hsa-mir-640 microRNA 640 ncRNA chr1-3733 chr1 235107373 235107583 + 12.7 0.000 Intergenic Intergenic 20459 NR_002956 677802 Hs.744743 NR_002956 ENSG00000207181 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA chr18-706 chr18 5432175 5432385 + 12.7 0.000 intron (NM_001281535, intron 10 of 21) intron (NM_001281535, intron 10 of 21) 108276 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr2-3401 chr2 36561565 36561775 + 12.7 0.000 intron (NM_001042548, intron 5 of 8) intron (NM_001042548, intron 5 of 8) 36498 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr10-3462 chr10 58573174 58573384 + 12.7 0.000 intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 60407 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr8-2000 chr8 94950177 94950387 + 12.7 0.000 promoter-TSS (NM_033285) promoter-TSS (NM_033285) 722 NR_148907 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr4-1322 chr4 140968494 140968704 + 12.7 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 164870 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr1-5323 chr1 225813603 225813813 + 12.7 0.000 intron (NM_001291163, intron 1 of 8) intron (NM_001291163, intron 1 of 8) 3574 NM_001291163 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr21-342 chr21 32382389 32382599 + 12.7 0.000 intron (NM_014825, intron 4 of 38) intron (NM_014825, intron 4 of 38) -5172 NR_002996 677846 Hs.712293 NR_002996 ENSG00000200792 SNORA80A ACA67|SNORA80 small nucleolar RNA, H/ACA box 80A snoRNA chr1-10559 chr1 172928460 172928670 + 12.7 0.000 Intergenic Intergenic 122398 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr15-1754 chr15 59274184 59274394 + 12.7 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 67446 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr16-1252 chr16 9859751 9859961 + 12.7 0.000 intron (NM_001134408, intron 4 of 13) intron (NM_001134408, intron 4 of 13) 322211 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr2-2661 chr2 216142630 216142840 + 12.7 0.000 intron (NM_021141, intron 13 of 20) intron (NM_021141, intron 13 of 20) 33387 NM_021141 7520 Hs.388739 NM_021141 ENSG00000079246 XRCC5 KARP-1|KARP1|KU80|KUB2|Ku86|NFIV X-ray repair cross complementing 5 protein-coding chr17-3662 chr17 8192294 8192504 + 12.7 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -2219 NM_017622 54785 Hs.129563 NM_017622 ENSG00000196544 BORCS6 C17orf59|PRO2472 BLOC-1 related complex subunit 6 protein-coding chr11-5315 chr11 47507558 47507768 + 12.7 0.000 intron (NM_001330272, intron 1 of 15) intron (NM_001330272, intron 1 of 15) -13142 NM_198700 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr19-2723 chr19 33376467 33376677 + 12.7 0.000 intron (NM_001252296, intron 1 of 1) MER5A|DNA|hAT-Charlie 2048 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr12-2478 chr12 66369563 66369773 + 12.7 0.000 intron (NM_001366722, intron 23 of 24) intron (NM_001366722, intron 23 of 24) 67123 NR_135080 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr14-1860 chr14 72027401 72027611 + 12.7 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 93979 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr1-2749 chr1 43454554 43454764 + 12.7 0.000 promoter-TSS (NM_001243526) promoter-TSS (NM_001243526) -670 NM_001190880 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr7-1624 chr7 19522580 19522790 + 12.7 0.000 Intergenic Intergenic 182751 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr3-2169 chr3 168213970 168214180 + 12.7 0.000 Intergenic Intergenic -35447 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr4-1383 chr4 123399340 123399550 + 12.7 0.000 promoter-TSS (NM_005841) promoter-TSS (NM_005841) -95 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr12-2502 chr12 81053866 81054076 + 12.7 0.000 Intergenic L2b|LINE|L2 -24108 NM_001330242 79611 Hs.259559 NM_024560 ENSG00000111058 ACSS3 - acyl-CoA synthetase short chain family member 3 protein-coding chr3-2492 chr3 152159527 152159737 + 12.7 0.000 intron (NR_136178, intron 2 of 2) intron (NR_136178, intron 2 of 2) 45797 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr8-2680 chr8 89759246 89759456 + 12.7 0.000 intron (NM_003821, intron 1 of 10) intron (NM_003821, intron 1 of 10) 1535 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding chr15-675 chr15 81236138 81236348 + 12.7 0.000 intron (NM_001352686, intron 2 of 18) intron (NM_001352686, intron 2 of 18) 36767 NM_001352686 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding chr13-1301 chr13 80084124 80084334 + 12.7 0.000 Intergenic Intergenic 73152 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr9-2770 chr9 108937012 108937222 + 12.7 0.000 intron (NM_017832, intron 3 of 5) AluSg4|SINE|Alu 2717 NM_017832 54942 Hs.29276 NM_017832 ENSG00000119328 ABITRAM C9orf6|CG-8|FAM206A|Simiate actin binding transcription modulator protein-coding chr20-811 chr20 38117845 38118055 + 12.7 0.000 Intergenic Intergenic 47320 NM_198951 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr15-1158 chr15 71596840 71597050 + 12.7 0.000 intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 49709 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr11-6108 chr11 36723731 36723941 + 12.7 0.000 Intergenic Intergenic -125557 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr7-5633 chr7 54596536 54596746 + 12.7 0.000 Intergenic LTR9|LTR|ERV1 39671 NR_038994 285878 Hs.335933 NR_038994 ENSG00000224223 VSTM2A-OT1 GS1-18A18.1 VSTM2A overlapping transcript 1 ncRNA chr3-1774 chr3 8872417 8872627 + 12.7 0.000 Intergenic L2a|LINE|L2 90950 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr4-4907 chr4 122303643 122303853 + 12.7 0.000 intron (NM_015312, intron 53 of 83) Tigger1|DNA|TcMar-Tigger -75263 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding chr17-4014 chr17 75428932 75429142 + 12.7 0.000 Intergenic OldhAT1|DNA|hAT-Ac 22968 NR_037449 100500841 NR_037449 ENSG00000264511 MIR3678 mir-3678 microRNA 3678 ncRNA chr2-3685 chr2 201114904 201115114 + 12.7 0.000 Intergenic L1M4b|LINE|L1 -1095 NM_001127184 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS|cFLIP CASP8 and FADD like apoptosis regulator protein-coding chr20-2530 chr20 35434314 35434524 + 12.7 0.000 exon (NM_000557, exon 2 of 2) exon (NM_000557, exon 2 of 2) 1390 NR_161326 554250 Hs.711481 NM_001350519 ENSG00000204183 GDF5OS - growth differentiation factor 5 opposite strand ncRNA chr8-2041 chr8 115397026 115397236 + 12.7 0.000 Intergenic Intergenic 270882 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr9-3156 chr9 112166554 112166764 + 12.7 0.000 intron (NM_022486, intron 1 of 16) intron (NM_022486, intron 1 of 16) 8638 NM_001282643 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr9-2099 chr9 88237037 88237247 + 12.7 0.000 Intergenic Intergenic -98661 NM_001350978 645961 Hs.632070 NM_001166137 SPATA31C2 FAM75C2 SPATA31 subfamily C member 2 protein-coding chr2-2243 chr2 223549335 223549545 + 12.7 0.000 Intergenic Intergenic 52921 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr13-820 chr13 31797350 31797560 + 12.7 0.000 intron (NM_130806, intron 17 of 17) intron (NM_130806, intron 17 of 17) -49328 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr12-1071 chr12 1474162 1474372 + 12.7 0.000 intron (NR_027948, intron 19 of 19) intron (NR_027948, intron 19 of 19) -26224 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr3-6780 chr3 142902643 142902853 + 12.7 0.000 Intergenic L2a|LINE|L2 -13665 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr13-1556 chr13 30898913 30899123 + 12.7 0.000 intron (NR_038287, intron 2 of 3) intron (NR_038287, intron 2 of 3) -7253 NM_032849 84935 Hs.147880 NM_032849 ENSG00000102802 MEDAG AWMS3|C13orf33|MEDA-4|MEDA4|hAWMS3 mesenteric estrogen dependent adipogenesis protein-coding chr17-1592 chr17 58692586 58692796 + 12.7 0.000 promoter-TSS (NR_103872) promoter-TSS (NR_103872) 89 NM_058216 5889 Hs.412587 NM_002876 ENSG00000108384 RAD51C BROVCA3|FANCO|R51H3|RAD51L2 RAD51 paralog C protein-coding chr1-4674 chr1 214990605 214990815 + 12.7 0.000 Intergenic MER5A|DNA|hAT-Charlie -14832 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr20-656 chr20 40506635 40506845 + 12.7 0.000 Intergenic Intergenic 182496 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr2-880 chr2 25982296 25982506 + 12.7 0.000 promoter-TSS (NM_002254) promoter-TSS (NM_002254) 96 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C - kinesin family member 3C protein-coding chr8-3964 chr8 49045952 49046162 + 12.7 0.000 Intergenic Intergenic -8279 NM_001256596 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr10-3596 chr10 89087119 89087329 + 12.7 0.000 Intergenic Intergenic -23813 NR_039827 100616192 NR_039827 ENSG00000265375 MIR4679-2 - microRNA 4679-2 ncRNA chr3-6952 chr3 161991087 161991297 + 12.7 0.000 Intergenic MLT1J2-int|LTR|ERVL-MaLR 494384 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr3-2795 chr3 3192070 3192280 + 12.7 0.000 Intergenic LTR36|LTR|ERV1 -12458 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr5-1325 chr5 132830103 132830313 + 12.7 0.000 intron (NM_001172700, intron 1 of 9) CpG 439 NM_001172700 134549 Hs.519574 NM_133456 ENSG00000164403 SHROOM1 APXL2 shroom family member 1 protein-coding chr5-5565 chr5 149129340 149129550 + 12.7 0.000 Intergenic Intergenic -12002 NM_001345859 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr7-2626 chr7 1412078 1412288 + 12.7 0.000 Intergenic Intergenic 47287 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr2-4953 chr2 178394886 178395096 + 12.7 0.000 intron (NM_001201480, intron 25 of 25) intron (NM_001201480, intron 25 of 25) -18668 NR_110205 101927027 Hs.715694 NR_110204 ENSG00000223960 CHROMR CHROME|PRKRA-AS1 cholesterol induced regulator of metabolism RNA ncRNA chr2-5370 chr2 97359381 97359591 + 12.7 0.000 Intergenic Intergenic 64541 NR_103733 100506076 Hs.732616 NR_103732 LOC100506076 - uncharacterized LOC100506076 ncRNA chr9-2253 chr9 85421497 85421707 + 12.7 0.000 Intergenic Intergenic 320427 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr18-811 chr18 2809667 2809877 + 12.7 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -37234 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr21-224 chr21 32278986 32279196 + 12.7 0.000 promoter-TSS (NM_018944) promoter-TSS (NM_018944) -42 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr1-7414 chr1 39615887 39616097 + 12.7 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 23651 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr1-6826 chr1 97252030 97252240 + 12.7 0.000 intron (NM_000110, intron 18 of 22) intron (NM_000110, intron 18 of 22) 156212 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr3-5054 chr3 40087578 40087788 + 12.7 0.000 intron (NM_001284425, intron 3 of 15) MER63A|DNA|hAT-Blackjack -12328 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr2-5456 chr2 126504023 126504233 + 12.7 0.000 Intergenic L1MC5|LINE|L1 -151807 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr2-3766 chr2 9360751 9360961 + 12.7 0.000 intron (NM_003887, intron 15 of 27) MER63B|DNA|hAT-Blackjack 61735 NR_134951 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr2-3970 chr2 71714146 71714356 + 12.7 0.000 Intergenic Intergenic 247552 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr5-2462 chr5 137157127 137157337 + 12.7 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 29035 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr2-1659 chr2 55161569 55161779 + 12.7 0.000 Intergenic Intergenic -23843 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr8-2005 chr8 98471121 98471331 + 12.7 0.000 intron (NM_006281, intron 10 of 10) intron (NM_006281, intron 10 of 10) 44268 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr9-4577 chr9 92832692 92832902 + 12.7 0.000 intron (NR_026868, intron 8 of 9) L1MA4A|LINE|L1 23186 NR_026868 138649 Hs.643597 NM_001010925 ENSG00000187984 ANKRD19P ANKRD19|bA526D8.2 ankyrin repeat domain 19, pseudogene pseudo chr15-3008 chr15 55741324 55741534 + 12.7 0.000 intron (NM_173814, intron 1 of 19) intron (NM_173814, intron 1 of 19) 1723 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chr11-1665 chr11 8959707 8959917 + 12.7 0.000 intron (NM_001286094, intron 1 of 3) intron (NM_001286094, intron 1 of 3) 4630 NM_020644 56674 Hs.501853 NM_020644 ENSG00000175348 TMEM9B C11orf15 TMEM9 domain family member B protein-coding chr12-2605 chr12 122187618 122187828 + 12.7 0.000 exon (NM_001098519, exon 4 of 12) exon (NM_001098519, exon 4 of 12) 4600 NM_001098519 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr17-2982 chr17 67510054 67510264 + 12.7 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -38574 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr3-1070 chr3 71389930 71390140 + 12.7 0.000 intron (NR_146142, intron 3 of 19) intron (NR_146142, intron 3 of 19) -85264 NM_001244812 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr1-3638 chr1 56525487 56525697 + 12.7 0.000 intron (NM_003713, intron 2 of 5) intron (NM_003713, intron 2 of 5) 53971 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr1-3609 chr1 31010210 31010420 + 12.7 0.000 intron (NM_001020658, intron 3 of 21) MLT1F2|LTR|ERVL-MaLR -42078 NR_003066 692200 NR_003066 SNORD103C HBII-251|SNORD85 small nucleolar RNA, C/D box 103C snoRNA chr22-1408 chr22 40560589 40560799 + 12.7 0.000 intron (NM_020831, intron 2 of 14) intron (NM_020831, intron 2 of 14) -26867 NM_001318139 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr8-2977 chr8 83142914 83143124 + 12.7 0.000 Intergenic MER47B|DNA|TcMar-Tigger 230915 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr9-1747 chr9 129167200 129167410 + 12.7 0.000 Intergenic MIRb|SINE|MIR 10956 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr22-1575 chr22 44686951 44687161 + 12.7 0.000 intron (NM_001198721, intron 2 of 9) L1MEd|LINE|L1 9971 NM_015366 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr3-2071 chr3 184337373 184337583 + 12.7 0.000 promoter-TSS (NM_144635) promoter-TSS (NM_144635) -122 NM_144635 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr1-9161 chr1 19983643 19983853 + 12.7 0.000 Intergenic LTR12C|LTR|ERV1 -3314 NM_001161727 5320 Hs.466804 NM_000300 ENSG00000188257 PLA2G2A MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2 phospholipase A2 group IIA protein-coding chr4-4798 chr4 104312202 104312412 + 12.7 0.000 Intergenic L1M1|LINE|L1 -178658 NR_125926 101929468 Hs.480435 NR_125926 ENSG00000245384 CXXC4-AS1 - CXXC4 antisense RNA 1 ncRNA chr19-4386 chr19 3062970 3063180 + 12.7 0.000 promoter-TSS (NM_001130) promoter-TSS (NM_001130) -109 NM_198969 166 Hs.515053 NM_001130 ENSG00000104964 TLE5 AES|AES-1|AES-2|ESP1|GRG|GRG5|Grg-5 TLE family member 5, transcriptional modulator protein-coding chr8-2599 chr8 54171830 54172040 + 12.7 0.000 Intergenic Intergenic 36694 NM_014175 29088 Hs.18349 NM_014175 ENSG00000137547 MRPL15 HSPC145|L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding chr4-3924 chr4 158648863 158649073 + 12.7 0.000 intron (NR_045581, intron 17 of 17) AluSz|SINE|Alu 22919 NM_001008393 201725 Hs.380920 NM_001008393 ENSG00000205208 C4orf46 RCDG1 chromosome 4 open reading frame 46 protein-coding chr4-5098 chr4 147853794 147854004 + 12.7 0.000 intron (NM_024605, intron 4 of 22) intron (NM_024605, intron 4 of 22) 71304 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr17-2493 chr17 79045813 79046023 + 12.7 0.000 intron (NR_049769, intron 2 of 3) intron (NR_049769, intron 2 of 3) 11619 NM_198593 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and TNF related 1 protein-coding chrX-805 chrX 68651100 68651310 + 12.7 0.000 intron (NM_014725, intron 1 of 13) intron (NM_014725, intron 1 of 13) 3536 NM_014725 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chrX-1077 chrX 137070352 137070562 + 12.7 0.000 Intergenic MIRc|SINE|MIR -38783 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr9-1772 chr9 134538041 134538251 + 12.7 0.000 Intergenic Intergenic -103659 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr6-4335 chr6 17031518 17031728 + 12.7 0.000 Intergenic Intergenic -70635 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chrX-1150 chrX 40689024 40689234 + 12.7 0.000 intron (NM_004229, intron 15 of 30) intron (NM_004229, intron 15 of 30) -41568 NM_001330455 159013 Hs.495961 NM_144970 ENSG00000185753 CXorf38 - chromosome X open reading frame 38 protein-coding chr6-1384 chr6 100549921 100550131 + 12.7 0.000 intron (NM_006828, intron 36 of 41) intron (NM_006828, intron 36 of 41) -86351 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr3-5627 chr3 10199028 10199238 + 12.7 0.000 intron (NM_001570, intron 2 of 12) intron (NM_001570, intron 2 of 12) 34214 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr4-1286 chr4 80322967 80323177 + 12.7 0.000 Intergenic Intergenic -12648 NM_001206997 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr10-3233 chr10 109966983 109967193 + 12.7 0.000 intron (NR_038943, intron 2 of 4) intron (NR_038943, intron 2 of 4) -29285 NM_001320591 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr5-1205 chr5 100900942 100901152 + 12.7 0.000 intron (NM_005668, intron 1 of 4) CpG 2235 NM_005668 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr1-4093 chr1 227416502 227416712 + 12.7 0.000 Intergenic Intergenic -98115 NM_001366011 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr9-5847 chr9 130316876 130317086 + 12.7 0.000 intron (NM_001291815, intron 15 of 97) intron (NM_001291815, intron 15 of 97) 51221 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr7-1642 chr7 44062599 44062809 + 12.7 0.000 TTS (NM_001284315) TTS (NM_001284315) 2863 NM_000290 5224 Hs.632642 NM_000290 ENSG00000164708 PGAM2 GSD10|PGAM-M|PGAMM phosphoglycerate mutase 2 protein-coding chr13-1646 chr13 62121072 62121282 + 12.7 0.000 Intergenic Intergenic -91105 NR_125787 103752583 Hs.578048 NR_125787 LINC01075 - long intergenic non-protein coding RNA 1075 ncRNA chr5-872 chr5 176416565 176416775 + 12.7 0.000 promoter-TSS (NM_007097) promoter-TSS (NM_007097) -101 NR_045724 1212 Hs.484241 NM_001834 ENSG00000175416 CLTB LCB clathrin light chain B protein-coding chr16-3866 chr16 69497697 69497907 + 12.7 0.000 Intergenic Intergenic 68066 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr10-3032 chr10 115051357 115051567 + 12.7 0.000 Intergenic Intergenic -41903 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr2-4921 chr2 158725725 158725935 + 12.7 0.000 intron (NR_135242, intron 1 of 3) intron (NR_135242, intron 1 of 3) 9172 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr19-2261 chr19 55280207 55280417 + 12.7 0.000 promoter-TSS (NM_001130106) promoter-TSS (NM_001130106) 71 NM_001130106 23640 Hs.53066 NM_012267 ENSG00000133265 HSPBP1 FES1 HSPA (Hsp70) binding protein 1 protein-coding chr7-3851 chr7 101614187 101614397 + 12.7 0.000 intron (NM_138403, intron 6 of 7) intron (NM_138403, intron 6 of 7) 15004 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr20-1746 chr20 47586781 47586991 + 12.7 0.000 intron (NM_181659, intron 2 of 22) L1MC4|LINE|L1 84999 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr11-3261 chr11 74670062 74670272 + 12.7 0.000 Intergenic MIR3|SINE|MIR 41200 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chrX-1679 chrX 3436677 3436887 + 12.7 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -90130 NM_015419 25878 Hs.369422 NM_015419 ENSG00000101825 MXRA5 - matrix remodeling associated 5 protein-coding chr2-2029 chr2 112646943 112647153 + 12.7 0.000 exon (NM_005415, exon 2 of 11) exon (NM_005415, exon 2 of 11) 1109 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding chr3-2536 chr3 47281527 47281737 + 12.7 0.000 intron (NM_022342, intron 1 of 19) AluJb|SINE|Alu 1167 NM_022342 64147 Hs.373947 NM_022342 ENSG00000088727 KIF9 - kinesin family member 9 protein-coding chr6-2410 chr6 153646925 153647135 + 12.7 0.000 Intergenic Intergenic -363466 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr3-5592 chr3 8168192 8168402 + 12.7 0.000 Intergenic AluYc|SINE|Alu -151990 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr1-3711 chr1 208528571 208528781 + 12.7 0.000 Intergenic Intergenic -200012 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr7-2223 chr7 124713114 124713324 + 12.7 0.000 Intergenic Intergenic 52573 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr4-2770 chr4 16140225 16140435 + 12.7 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -56307 NM_006017 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr10-1903 chr10 121754052 121754262 + 12.7 0.000 intron (NM_001001976, intron 11 of 11) L1MC4|LINE|L1 -155699 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr11-456 chr11 76380900 76381110 + 12.7 0.000 promoter-TSS (NR_130898) promoter-TSS (NR_130898) -40 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr19-1783 chr19 46787292 46787502 + 12.7 0.000 promoter-TSS (NM_001145144) promoter-TSS (NM_001145144) -104 NM_001145144 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding chr13-1580 chr13 37878617 37878827 + 12.7 0.000 Intergenic Intergenic -8297 NM_001135957 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr10-1155 chr10 116888723 116888933 + 12.7 0.000 intron (NM_018330, intron 14 of 14) MLT2F|LTR|ERVL -39106 NM_001330164 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding chr7-3615 chr7 33533290 33533500 + 12.7 0.000 intron (NM_198428, intron 20 of 22) LTR88a|LTR|Gypsy? -371520 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr9-2630 chr9 21559726 21559936 + 12.7 0.000 promoter-TSS (NR_027054) promoter-TSS (NR_027054) -33 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr10-3201 chr10 98374629 98374839 + 12.7 0.000 Intergenic Intergenic 20573 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr8-3159 chr8 91022784 91022994 + 12.7 0.000 intron (NM_018710, intron 1 of 6) intron (NM_018710, intron 1 of 6) 17970 NM_018710 55529 Hs.202517 NM_018710 ENSG00000155099 PIP4P2 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 protein-coding chr19-1763 chr19 10604008 10604218 + 12.7 0.000 intron (NM_001145056, intron 1 of 21) L2a|LINE|L2 1658 NM_001145056 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr3-3125 chr3 150073045 150073255 + 12.7 0.000 Intergenic Intergenic -23293 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr7-3877 chr7 106270531 106270741 + 12.7 0.000 intron (NM_005746, intron 4 of 10) MLT1H|LTR|ERVL-MaLR 14347 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr19-2254 chr19 51704314 51704524 + 12.7 0.000 exon (NM_001316972, exon 8 of 9) exon (NM_001316972, exon 8 of 9) -10963 NR_108100 102238594 Hs.640185 NR_108100 ENSG00000269959 SPACA6P-AS LINC01129 SPACA6P antisense RNA ncRNA chr19-2344 chr19 46631175 46631385 + 12.7 0.000 Intergenic Intergenic 3402 NM_033258 94235 Hs.283961 NM_033258 ENSG00000167414 GNG8 - G protein subunit gamma 8 protein-coding chr14-365 chr14 23109312 23109522 + 12.7 0.000 Intergenic Intergenic -4428 NM_001354640 100128908 Hs.578287 NM_001354640 ENSG00000283654 LMLN2 - leishmanolysin like peptidase 2 protein-coding chr2-8964 chr2 189570567 189570777 + 12.7 0.000 intron (NM_014585, intron 5 of 7) intron (NM_014585, intron 5 of 7) 10139 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr3-5413 chr3 164465188 164465398 + 12.7 0.000 Intergenic Intergenic -293737 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr16-1220 chr16 84940849 84941059 + 12.6 0.000 Intergenic Intergenic 70581 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr6-3244 chr6 145204265 145204475 + 12.6 0.000 Intergenic Intergenic 482507 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr8-2061 chr8 122140989 122141199 + 12.6 0.000 Intergenic LTR16A|LTR|ERVL 427550 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr7-1952 chr7 90597189 90597399 + 12.6 0.000 intron (NM_001287135, intron 1 of 14) intron (NM_001287135, intron 1 of 14) 973 NM_001287135 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr6-2197 chr6 37246200 37246410 + 12.6 0.000 intron (NM_145316, intron 1 of 3) intron (NM_145316, intron 1 of 3) 11294 NM_145316 221468 Hs.520101 NM_145316 ENSG00000172738 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding chr1-2830 chr1 52727138 52727348 + 12.6 0.000 intron (NM_024646, intron 1 of 13) intron (NM_024646, intron 1 of 13) 790 NM_024646 79699 Hs.476280 NM_024646 ENSG00000162378 ZYG11B ZYG11 zyg-11 family member B, cell cycle regulator protein-coding chr8-1586 chr8 133683910 133684120 + 12.6 0.000 promoter-TSS (NR_134462) promoter-TSS (NR_134462) 51 NR_134462 105375773 Hs.445172 NR_134462 LOC105375773 - uncharacterized LOC105375773 ncRNA chr4-1254 chr4 8410587 8410797 + 12.6 0.000 intron (NM_003501, intron 5 of 17) intron (NM_003501, intron 5 of 17) 30031 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr1-5307 chr1 219923975 219924185 + 12.6 0.000 intron (NM_018713, intron 2 of 3) AluSx|SINE|Alu 4571 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr1-3552 chr1 231408059 231408269 + 12.6 0.000 intron (NM_022051, intron 1 of 4) intron (NM_022051, intron 1 of 4) 16880 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr4-2327 chr4 141769040 141769250 + 12.6 0.000 Intergenic Intergenic 132562 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr22-1614 chr22 24088838 24089048 + 12.6 0.000 intron (NM_012295, intron 23 of 36) intron (NM_012295, intron 23 of 36) 77573 NM_001199281 23523 Hs.517478 NM_012295 ENSG00000099991 CABIN1 CAIN|KB-318B8.7|PPP3IN calcineurin binding protein 1 protein-coding chr11-3393 chr11 132065038 132065248 + 12.6 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 154325 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr8-2581 chr8 43281079 43281289 + 12.6 0.000 Intergenic Intergenic -11258 NM_001005365 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr2-5675 chr2 201900592 201900802 + 12.6 0.000 Intergenic MIR|SINE|MIR 94118 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr1-1687 chr1 153946538 153946748 + 12.6 0.000 promoter-TSS (NM_014856) promoter-TSS (NM_014856) 75 NM_014856 9909 Hs.744878 NM_014856 ENSG00000198837 DENND4B KIAA0476 DENN domain containing 4B protein-coding chr3-1212 chr3 52391383 52391593 + 12.6 0.000 exon (NM_015512, exon 63 of 78) exon (NM_015512, exon 63 of 78) 18520 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr21-453 chr21 45747926 45748136 + 12.6 0.000 promoter-TSS (NM_001348243) promoter-TSS (NM_001348243) 17 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr14-980 chr14 75861192 75861402 + 12.6 0.000 intron (NM_015072, intron 28 of 31) intron (NM_015072, intron 28 of 31) 120698 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr7-2433 chr7 116512188 116512398 + 12.6 0.000 Intergenic Intergenic 12247 NM_001206748 858 Hs.212332 NM_001233 ENSG00000105971 CAV2 CAV caveolin 2 protein-coding chr11-2162 chr11 108470457 108470667 + 12.6 0.000 Intergenic AluY|SINE|Alu -3031 NR_147053 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr18-2301 chr18 79321705 79321915 + 12.6 0.000 intron (NR_148360, intron 16 of 31) intron (NR_148360, intron 16 of 31) -74120 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr2-1388 chr2 47189527 47189737 + 12.6 0.000 Intergenic Intergenic -12696 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr2-5703 chr2 211477906 211478116 + 12.6 0.000 intron (NM_001042599, intron 20 of 26) intron (NM_001042599, intron 20 of 26) 860440 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr10-1526 chr10 71811971 71812181 + 12.6 0.000 5' UTR (NM_001171936, exon 1 of 4) 5' UTR (NM_001171936, exon 1 of 4) 193 NM_001171936 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr5-1608 chr5 51619083 51619293 + 12.6 0.000 Intergenic L2a|LINE|L2 235740 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding chr14-1398 chr14 54444854 54445064 + 12.6 0.000 Intergenic Intergenic -3585 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding chr9-1896 chr9 125878301 125878511 + 12.6 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 130223 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr3-2851 chr3 32453406 32453616 + 12.6 0.000 intron (NM_138410, intron 4 of 4) L1ME4a|LINE|L1 49341 NM_017801 54918 Hs.380627 NM_017801 ENSG00000091317 CMTM6 CKLFSF6|PRO2219 CKLF like MARVEL transmembrane domain containing 6 protein-coding chr4-5206 chr4 164513475 164513685 + 12.6 0.000 Intergenic L2b|LINE|L2 -130325 NM_001166373 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr11-2320 chr11 66864680 66864890 + 12.6 0.000 intron (NM_022172, intron 9 of 20) intron (NM_022172, intron 9 of 20) 7721 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr6-885 chr6 86723715 86723925 + 12.6 0.000 Intergenic L2a|LINE|L2 -213708 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr10-3545 chr10 76559184 76559394 + 12.6 0.000 3' UTR (NM_001305581, exon 7 of 7) 3' UTR (NM_001305581, exon 7 of 7) -328755 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr22-592 chr22 20651543 20651753 + 12.6 0.000 Intergenic AluJr|SINE|Alu -37907 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin like 4, pseudogene pseudo chr11-3084 chr11 19740840 19741050 + 12.6 0.000 intron (NM_182964, intron 1 of 37) MIR|SINE|MIR 19138 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr12-2484 chr12 70692855 70693065 + 12.6 0.000 intron (NM_130846, intron 4 of 9) L2c|LINE|L2 -55531 NM_001330204 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase receptor type B protein-coding chr19-2199 chr19 24054562 24054772 + 12.6 0.000 intron (NM_001278677, intron 3 of 5) BSR/Beta|Satellite|Satellite 21218 NM_001278677 9534 Hs.434406 NM_004876 ENSG00000213096 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding chr7-4154 chr7 95690436 95690646 + 12.6 0.000 Intergenic Intergenic -81965 NM_001278422 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr1-8587 chr1 179596377 179596587 + 12.6 0.000 intron (NM_001199091, intron 4 of 16) L1ME1|LINE|L1 4650 NM_001199085 163589 Hs.197354 NM_173533 ENSG00000162782 TDRD5 TUDOR3 tudor domain containing 5 protein-coding chr4-2863 chr4 71948874 71949084 + 12.6 0.000 Intergenic L1PA6|LINE|L1 -82825 NM_004885 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chrX-730 chrX 153966488 153966698 + 12.6 0.000 intron (NM_005334, intron 1 of 25) intron (NM_005334, intron 1 of 25) -2172 NR_046608 100873990 Hs.682261 NR_046608 HCFC1-AS1 - HCFC1 antisense RNA 1 ncRNA chr2-3715 chr2 226446502 226446712 + 12.6 0.000 Intergenic Intergenic 212186 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr12-1426 chr12 57086693 57086903 + 12.6 0.000 Intergenic Intergenic -2316 NM_001330305 4665 Hs.159223 NM_005967 ENSG00000166886 NAB2 MADER NGFI-A binding protein 2 protein-coding chr16-1460 chr16 85455392 85455602 + 12.6 0.000 Intergenic Intergenic -149172 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr1-3665 chr1 112515642 112515852 + 12.6 0.000 intron (NM_001291880, intron 2 of 4) intron (NM_001291880, intron 2 of 4) 6782 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr11-4339 chr11 72589422 72589632 + 12.6 0.000 intron (NM_001143839, intron 10 of 29) intron (NM_001143839, intron 10 of 29) 18871 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chrX-518 chrX 153954582 153954792 + 12.6 0.000 exon (NM_005334, exon 17 of 26) exon (NM_005334, exon 17 of 26) -10044 NM_002910 5973 Hs.158331 NM_002910 ENSG00000102032 RENBP RBP|RNBP renin binding protein protein-coding chr12-4698 chr12 49261760 49261970 + 12.6 0.000 intron (NM_001303117, intron 2 of 4) intron (NM_001303117, intron 2 of 4) -3217 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr4-2933 chr4 94548499 94548709 + 12.6 0.000 intron (NM_001011516, intron 3 of 9) intron (NM_001011516, intron 3 of 9) 96662 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding GL000225.1-9 GL000225.1 9143 9353 + 12.6 0.000 NA NA NA NA chr4-2378 chr4 14719242 14719452 + 12.6 0.000 intron (NR_126435, intron 2 of 6) L1PA7|LINE|L1 168822 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr1-6499 chr1 23585737 23585947 + 12.6 0.000 Intergenic Intergenic -26341 NM_002167 3399 Hs.76884 NM_002167 ENSG00000117318 ID3 HEIR-1|bHLHb25 inhibitor of DNA binding 3, HLH protein protein-coding chr15-1268 chr15 85044326 85044536 + 12.6 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 62457 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr9-1242 chr9 136277014 136277224 + 12.6 0.000 Intergenic MIRb|SINE|MIR 26975 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr22-1939 chr22 46797055 46797265 + 12.6 0.000 intron (NM_001284303, intron 2 of 10) intron (NM_001284303, intron 2 of 10) 23233 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr17-4001 chr17 72391871 72392081 + 12.6 0.000 Intergenic Intergenic 49165 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr19-2169 chr19 11963985 11964195 + 12.6 0.000 promoter-TSS (NM_001367174) promoter-TSS (NM_001367174) -950 NM_001367174 284390 Hs.646386 NM_001012753 ENSG00000197054 ZNF763 ZNF|ZNF440L zinc finger protein 763 protein-coding chr2-2471 chr2 112624431 112624641 + 12.6 0.000 Intergenic Intergenic 19644 NR_033871 400999 Hs.585221 NR_033871 FLJ42351 - uncharacterized LOC400999 ncRNA chr1-3820 chr1 21782143 21782353 + 12.6 0.000 intron (NM_001350167, intron 1 of 26) intron (NM_001350167, intron 1 of 26) 901 NM_001350168 84196 Hs.467524 NM_032236 ENSG00000090686 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding chr2-3707 chr2 221732570 221732780 + 12.6 0.000 Intergenic L2a|LINE|L2 -158473 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr20-592 chr20 35370010 35370220 + 12.6 0.000 intron (NM_001184977, intron 3 of 7) intron (NM_001184977, intron 3 of 7) 41858 NM_018244 55245 Hs.726290 NM_018244 ENSG00000101019 UQCC1 BFZB|C20orf44|CBP3|UQCC ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding chr7-2294 chr7 73306765 73306975 + 12.6 0.000 intron (NM_148956, intron 4 of 9) AluSx1|SINE|Alu 1956 NM_148956 55695 Hs.510927 NM_018044 ENSG00000130305 NSUN5 NOL1|NOL1R|NSUN5A|WBSCR20|WBSCR20A|p120|p120(NOL1) NOP2/Sun RNA methyltransferase 5 protein-coding chr7-2419 chr7 92092270 92092480 + 12.6 0.000 intron (NM_147185, intron 38 of 49) intron (NM_147185, intron 38 of 49) 42102 NM_000786 1595 Hs.417077 NM_000786 ENSG00000001630 CYP51A1 CP51|CYP51|CYPL1|LDM|P450-14DM|P450L1 cytochrome P450 family 51 subfamily A member 1 protein-coding chr4-1518 chr4 93798908 93799118 + 12.6 0.000 Intergenic MIR3|SINE|MIR -29740 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr4-1137 chr4 16001396 16001606 + 12.6 0.000 intron (NM_001371408, intron 12 of 24) L2|LINE|L2 -38326 NM_031950 83888 Hs.98785 NM_031950 ENSG00000137441 FGFBP2 HBP17RP|KSP37 fibroblast growth factor binding protein 2 protein-coding chr17-2052 chr17 57832918 57833128 + 12.6 0.000 Intergenic MIRb|SINE|MIR 17021 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr3-2269 chr3 59559838 59560048 + 12.6 0.000 Intergenic Intergenic 98554 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr10-1465 chr10 96857656 96857866 + 12.6 0.000 intron (NM_001170766, intron 2 of 8) MER5A|DNA|hAT-Charlie 24816 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr8-887 chr8 37515278 37515488 + 12.6 0.000 Intergenic Intergenic 6003 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr11-3237 chr11 71884911 71885121 + 12.6 0.000 TTS (NM_001242853) TTS (NM_001242853) 6563 NM_001242853 100129216 Hs.740246 NM_001242853 ENSG00000225805 DEFB131B - defensin beta 131B protein-coding chr18-2667 chr18 52545150 52545360 + 12.6 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 205058 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr8-1429 chr8 114896787 114896997 + 12.6 0.000 Intergenic MER51-int|LTR|ERV1 771121 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr2-4115 chr2 152486045 152486255 + 12.6 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 150976 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr9-3609 chr9 86758615 86758825 + 12.6 0.000 Intergenic Intergenic 188786 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr6-1759 chr6 64431418 64431628 + 12.6 0.000 intron (NM_001292009, intron 28 of 43) intron (NM_001292009, intron 28 of 43) 624687 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr16-2498 chr16 88972967 88973177 + 12.6 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 4135 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr12-1514 chr12 57320028 57320238 + 12.6 0.000 intron (NM_001351217, intron 1 of 21) AluSq|SINE|Alu 21641 NM_001351208 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr5-3206 chr5 81290167 81290377 + 12.6 0.000 intron (NR_034122, intron 1 of 3) L1PA10|LINE|L1 11297 NR_034122 100131067 Hs.655855 NR_034121 ENSG00000247572 CKMT2-AS1 - CKMT2 antisense RNA 1 ncRNA chr17-1272 chr17 64724306 64724516 + 12.6 0.000 Intergenic Intergenic -56348 NR_106728 102464831 NR_106728 ENSG00000278581 MIR6080 hsa-mir-6080 microRNA 6080 ncRNA chr10-1952 chr10 17335071 17335281 + 12.6 0.000 intron (NM_001004470, intron 4 of 7) L3b|LINE|CR1 -51760 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr10-1347 chr10 110566573 110566783 + 12.6 0.000 Intergenic Intergenic -1013 NM_005445 9126 Hs.24485 NM_005445 ENSG00000108055 SMC3 BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1 structural maintenance of chromosomes 3 protein-coding chr16-1261 chr16 31165540 31165750 + 12.6 0.000 Intergenic AluJo|SINE|Alu -14465 NM_004960 2521 Hs.46894 NM_004960 ENSG00000089280 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding chr19-2533 chr19 35342389 35342599 + 12.6 0.000 intron (NM_001278417, intron 8 of 12) (TCCTTC)n|Simple_repeat|Simple_repeat -3019 NR_049828 100847070 NR_049828 ENSG00000284034 MIR5196 mir-5196 microRNA 5196 ncRNA chr16-1370 chr16 28277946 28278156 + 12.6 0.000 Intergenic MIR|SINE|MIR -14474 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr8-1421 chr8 89543764 89543974 + 12.6 0.000 Intergenic Intergenic 213842 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr6-3935 chr6 84263760 84263970 + 12.6 0.000 Intergenic Intergenic -36222 NM_001286206 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding chr21-423 chr21 21138044 21138254 + 12.6 0.000 intron (NM_001352595, intron 1 of 14) intron (NM_001352595, intron 1 of 14) -9013 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr1-4417 chr1 206723926 206724136 + 12.6 0.000 intron (NM_004759, intron 1 of 9) intron (NM_004759, intron 1 of 9) 39126 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr11-2229 chr11 66731293 66731503 + 12.6 0.000 Intergenic Intergenic -9999 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr11-4649 chr11 44574870 44575080 + 12.6 0.000 intron (NM_001024844, intron 1 of 8) L1ME4a|LINE|L1 9312 NM_002231 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr11-6055 chr11 31071789 31071999 + 12.6 0.000 intron (NM_001367979, intron 18 of 38) MLT1F|LTR|ERVL-MaLR -79208 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr14-2377 chr14 37996800 37997010 + 12.6 0.000 Intergenic Intergenic -94781 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr12-1575 chr12 121095876 121096086 + 12.6 0.000 Intergenic CpG -36895 NR_033956 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr7-4044 chr7 823935 824145 + 12.6 0.000 intron (NM_001367651, intron 2 of 21) intron (NM_001367651, intron 2 of 21) 7397 NM_001367696 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr12-3259 chr12 64969269 64969479 + 12.6 0.000 intron (NR_146276, intron 2 of 3) intron (NR_146276, intron 2 of 3) 22917 NR_146276 109729131 Hs.577553 NR_146276 ENSG00000248995 LINC02231 - long intergenic non-protein coding RNA 2231 ncRNA chr13-424 chr13 30895878 30896088 + 12.6 0.000 intron (NR_038287, intron 2 of 3) intron (NR_038287, intron 2 of 3) -10288 NM_032849 84935 Hs.147880 NM_032849 ENSG00000102802 MEDAG AWMS3|C13orf33|MEDA-4|MEDA4|hAWMS3 mesenteric estrogen dependent adipogenesis protein-coding chr5-2004 chr5 1789870 1790080 + 12.6 0.000 Intergenic Intergenic 9862 NM_032479 64979 Hs.719465 NM_032479 ENSG00000171421 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding chr12-3279 chr12 69541049 69541259 + 12.6 0.000 intron (NM_001278351, intron 5 of 10) intron (NM_001278351, intron 5 of 10) 25714 NR_145803 109623461 NR_145803 SNORA113 - small nucleolar RNA, H/ACA box 113 snoRNA chr2-2815 chr2 56334577 56334787 + 12.6 0.000 intron (NM_001348516, intron 2 of 2) L3|LINE|CR1 -148912 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr2-2044 chr2 151049857 151050067 + 12.6 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 211901 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr2-4545 chr2 46393555 46393765 + 12.6 0.000 intron (NR_146999, intron 1 of 2) intron (NR_146999, intron 1 of 2) 507 NR_146999 105374582 Hs.570163 NR_146999 ENSG00000228100 LINC01820 - long intergenic non-protein coding RNA 1820 ncRNA chr13-972 chr13 23621223 23621433 + 12.6 0.000 intron (NM_001354985, intron 4 of 8) MamRTE1|LINE|RTE-BovB 41968 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr11-2761 chr11 64678601 64678811 + 12.6 0.000 intron (NM_015080, intron 6 of 22) intron (NM_015080, intron 6 of 22) -35161 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr2-1128 chr2 28424145 28424355 + 12.6 0.000 Intergenic L2|LINE|L2 -29578 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr3-1728 chr3 116864378 116864588 + 12.6 0.000 Intergenic Intergenic -14116 NR_039649 100616485 NR_039649 ENSG00000265433 MIR4447 - microRNA 4447 ncRNA chr14-1421 chr14 69368371 69368581 + 12.6 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 29823 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr11-2386 chr11 1401849 1402059 + 12.6 0.000 intron (NM_003957, intron 1 of 19) intron (NM_003957, intron 1 of 19) -8516 NM_001282218 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr8-2441 chr8 109292525 109292735 + 12.6 0.000 intron (NM_032869, intron 4 of 9) intron (NM_032869, intron 4 of 9) 37303 NM_001128211 84955 Hs.380291 NM_032869 ENSG00000120526 NUDCD1 CML66|OVA66 NudC domain containing 1 protein-coding chr7-1280 chr7 1813948 1814158 + 12.6 0.000 Intergenic Intergenic 30200 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr16-2402 chr16 70064833 70065043 + 12.6 0.000 intron (NR_003610, intron 1 of 25) intron (NR_003610, intron 1 of 25) 1010 NR_003610 283970 Hs.513695 NM_199134 ENSG00000196696 PDXDC2P-NPIPB14P - nuclear pore complex-interacting protein pseudo chr14-2441 chr14 74848821 74849031 + 12.6 0.000 Intergenic Intergenic 14908 NM_001243007 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding chr13-1012 chr13 28337831 28338041 + 12.6 0.000 intron (NM_002019, intron 17 of 29) intron (NM_002019, intron 17 of 29) 157192 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr1-3504 chr1 155014532 155014742 + 12.6 0.000 intron (NR_046206, intron 3 of 4) intron (NR_046206, intron 3 of 4) 12007 NR_046206 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr11-2070 chr11 78000102 78000312 + 12.6 0.000 Intergenic ERVL-E-int|LTR|ERVL -5539 NM_033547 92105 Hs.533723 NM_033547 ENSG00000149262 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding chr2-2909 chr2 231386451 231386661 + 12.6 0.000 Intergenic Intergenic -9154 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr12-1316 chr12 46260289 46260499 + 12.6 0.000 intron (NM_001278387, intron 1 of 17) UCON33|DNA|TcMar-Tigger 6122 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr5-2659 chr5 14251530 14251740 + 12.6 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 108293 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr14-1572 chr14 74531533 74531743 + 12.6 0.000 intron (NM_000428, intron 10 of 35) intron (NM_000428, intron 10 of 35) 37873 NM_194279 122961 Hs.291079 NM_194279 ENSG00000165898 ISCA2 HBLD1|ISA2|MMDS4|c14_5557 iron-sulfur cluster assembly 2 protein-coding chr1-7290 chr1 241131111 241131321 + 12.6 0.000 intron (NM_001282778, intron 2 of 16) intron (NM_001282778, intron 2 of 16) -1056 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr16-4208 chr16 12188419 12188629 + 12.6 0.000 intron (NM_032167, intron 13 of 20) intron (NM_032167, intron 13 of 20) 211790 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chrX-557 chrX 27890710 27890920 + 12.6 0.000 Intergenic Intergenic 82825 NM_182506 139422 Hs.447363 NM_182506 ENSG00000177689 MAGEB10 - MAGE family member B10 protein-coding chr1-10577 chr1 175146665 175146875 + 12.6 0.000 intron (NM_022093, intron 18 of 18) intron (NM_022093, intron 18 of 18) 46006 NM_001162895 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr17-3473 chr17 43718235 43718445 + 12.6 0.000 Intergenic Intergenic 40451 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr10-1702 chr10 43323098 43323308 + 12.6 0.000 Intergenic Intergenic -48433 NM_173160 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr16-2803 chr16 61576335 61576545 + 12.6 0.000 Intergenic L1PA14|LINE|L1 459998 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr1-11863 chr1 38077193 38077403 + 12.6 0.000 Intergenic L3|LINE|CR1 -11933 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr1-7603 chr1 248243360 248243570 + 12.6 0.000 Intergenic L1P4a|LINE|L1 4536 NM_017504 26245 Hs.381309 NM_017504 ENSG00000171180 OR2M4 HSHTPCRX18|HTPCRX18|OR1-55|OST710|TPCR100 olfactory receptor family 2 subfamily M member 4 protein-coding chr1-6156 chr1 180352653 180352863 + 12.6 0.000 intron (NM_032360, intron 6 of 7) MER5B|DNA|hAT-Charlie -78077 NR_037642 100527964 Hs.496545 NR_037642 ENSG00000230124 LHX4-AS1 - LHX4 antisense RNA 1 ncRNA chr1-7115 chr1 201838386 201838596 + 12.6 0.000 intron (NM_018085, intron 1 of 23) intron (NM_018085, intron 1 of 23) -8932 NR_046696 100873949 Hs.604842 NR_046696 ENSG00000231871 IPO9-AS1 - IPO9 antisense RNA 1 ncRNA chr14-1052 chr14 52802722 52802932 + 12.6 0.000 Intergenic L2a|LINE|L2 -11220 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding chr6-3177 chr6 126290195 126290405 + 12.6 0.000 Intergenic L2|LINE|L2 -49489 NM_001012507 387103 Hs.486401 NM_001012507 ENSG00000203760 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding chr16-1266 chr16 56357226 56357436 + 12.6 0.000 3' UTR (NM_020988, exon 9 of 9) 3' UTR (NM_020988, exon 9 of 9) 67658 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr8-1380 chr8 15789058 15789268 + 12.6 0.000 Intergenic Intergenic 248900 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr1-5814 chr1 209096135 209096345 + 12.6 0.000 Intergenic Intergenic 123786 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr12-2077 chr12 646453 646663 + 12.6 0.000 TTS (NR_122124) TTS (NR_122124) -2922 NM_001367996 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chr7-3059 chr7 134990904 134991114 + 12.6 0.000 intron (NM_001345852, intron 3 of 9) L1MEf|LINE|L1 4501 NM_001367814 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr3-5255 chr3 108453573 108453783 + 12.6 0.000 intron (NM_014981, intron 22 of 41) LTR84b|LTR|ERVL 75644 NM_014981 22989 Hs.731060 NM_014981 ENSG00000144821 MYH15 - myosin heavy chain 15 protein-coding chr10-2730 chr10 112742238 112742448 + 12.6 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -81153 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr7-892 chr7 4849524 4849734 + 12.6 0.000 intron (NM_018059, intron 2 of 14) Kanga1d|DNA|TcMar-Tc2 -12179 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr17-1903 chr17 66459733 66459943 + 12.6 0.000 intron (NM_002737, intron 2 of 16) (T)n|Simple_repeat|Simple_repeat -42984 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr8-1886 chr8 23114533 23114743 + 12.6 0.000 intron (NM_003841, intron 2 of 4) intron (NM_003841, intron 2 of 4) 11824 NM_003841 8794 Hs.655801 NM_003841 ENSG00000173535 TNFRSF10C CD263|DCR1|DCR1-TNFR|LIT|TRAIL-R3|TRAILR3|TRID TNF receptor superfamily member 10c protein-coding chr2-5687 chr2 203804253 203804463 + 12.6 0.000 Intergenic Intergenic -63413 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr2-2446 chr2 67790708 67790918 + 12.6 0.000 Intergenic Intergenic 34749 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr7-3813 chr7 95046792 95047002 + 12.6 0.000 intron (NM_017650, intron 2 of 15) intron (NM_017650, intron 2 of 15) 136999 NM_001166162 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr2-1503 chr2 18663409 18663619 + 12.6 0.000 Intergenic Intergenic -73934 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr2-9311 chr2 223894087 223894297 + 12.6 0.000 intron (NM_020830, intron 8 of 11) intron (NM_020830, intron 8 of 11) 51143 NM_020830 57590 Hs.368359 NM_020830 ENSG00000085449 WDFY1 FENS-1|FENS1|WDF1|ZFYVE17 WD repeat and FYVE domain containing 1 protein-coding chr14-1598 chr14 95926314 95926524 + 12.6 0.000 TTS (NR_132398) TTS (NR_132398) 49647 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr21-779 chr21 44999415 44999625 + 12.6 0.000 non-coding (NR_024089, exon 2 of 2) non-coding (NR_024089, exon 2 of 2) 5207 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr1-6181 chr1 202165576 202165786 + 12.6 0.000 Intergenic Intergenic -2370 NR_002930 148713 Hs.523870 NR_002930 ENSG00000243323 PTPRVP ESP|OST-PTP|PTPRV protein tyrosine phosphatase receptor type V, pseudogene pseudo chr3-2003 chr3 8869670 8869880 + 12.6 0.000 Intergenic hAT-N1_Mam|DNA|hAT-Tip100? 93697 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr1-2109 chr1 167904575 167904785 + 12.6 0.000 intron (NM_018417, intron 2 of 32) intron (NM_018417, intron 2 of 32) 9454 NM_018417 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr18-756 chr18 2998203 2998413 + 12.6 0.000 intron (NM_014646, intron 1 of 19) intron (NM_014646, intron 1 of 19) 13639 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr14-1045 chr14 21308611 21308821 + 12.6 0.000 intron (NM_020366, intron 6 of 23) LTR9B|LTR|ERV1 20739 NM_020366 57096 Hs.126035 NM_020366 ENSG00000092200 RPGRIP1 CORD13|LCA6|RGI1|RGRIP|RPGRIP|RPGRIP1d RPGR interacting protein 1 protein-coding chr22-1258 chr22 24180619 24180829 + 12.6 0.000 promoter-TSS (NM_019601) promoter-TSS (NM_019601) -763 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr7-3383 chr7 116583034 116583244 + 12.6 0.000 intron (NR_120506, intron 2 of 4) intron (NR_120506, intron 2 of 4) 31681 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr1-4957 chr1 53305959 53306169 + 12.6 0.000 intron (NM_004631, intron 2 of 18) L2b|LINE|L2 22006 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr14-769 chr14 31090867 31091077 + 12.6 0.000 intron (NM_001128126, intron 5 of 5) intron (NM_001128126, intron 5 of 5) 64329 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 subunit sigma 1 protein-coding chr22-2322 chr22 39483695 39483905 + 12.6 0.000 intron (NM_002409, intron 1 of 1) intron (NM_002409, intron 1 of 1) -3424 NM_001098270 4248 Hs.276808 NM_002409 ENSG00000128268 MGAT3 GNT-III|GNT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase protein-coding chr19-3462 chr19 33171975 33172185 + 12.6 0.000 intron (NR_135565, intron 9 of 11) L1MC2|LINE|L1 -22250 NM_002333 4037 Hs.515340 NM_002333 ENSG00000130881 LRP3 - LDL receptor related protein 3 protein-coding chr15-2066 chr15 60442686 60442896 + 12.6 0.000 intron (NR_147171, intron 11 of 16) intron (NR_147171, intron 11 of 16) 36351 NM_024611 79664 Hs.200943 NM_024611 ENSG00000128915 ICE2 BRCC1|NARG2 interactor of little elongation complex ELL subunit 2 protein-coding chrX-2533 chrX 98248588 98248798 + 12.6 0.000 Intergenic Intergenic -684158 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr1-7161 chr1 206950988 206951198 + 12.6 0.000 Intergenic MIR3|SINE|MIR -4627 NM_002644 5284 Hs.497589 NM_002644 ENSG00000162896 PIGR - polymeric immunoglobulin receptor protein-coding chr11-3178 chr11 63612310 63612520 + 12.6 0.000 intron (NM_007069, intron 1 of 3) Zaphod3|DNA|hAT-Tip100 2022 NM_007069 11145 Hs.502775 NM_007069 ENSG00000176485 PLAAT3 AdPLA|H-REV107|H-REV107-1|HRASLS3|HREV107|HREV107-1|HREV107-3|HRSL3|PLA2G16|PLAAT-3 phospholipase A and acyltransferase 3 protein-coding chr2-4290 chr2 233705938 233706148 + 12.6 0.000 intron (NM_205862, intron 2 of 5) AluSz6|SINE|Alu -6949 NM_019078 54579 Hs.554822 NM_019078 ENSG00000240224 UGT1A5 UDPGT|UDPGT 1-5|UGT1E UDP glucuronosyltransferase family 1 member A5 protein-coding chr17-1650 chr17 45101858 45102068 + 12.6 0.000 intron (NM_021079, intron 8 of 11) intron (NM_021079, intron 8 of 11) 12470 NR_106842 102465470 NR_106842 ENSG00000277249 MIR6784 hsa-mir-6784 microRNA 6784 ncRNA chr1-8420 chr1 88331647 88331857 + 12.6 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -352392 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr15-2131 chr15 73022891 73023101 + 12.6 0.000 Intergenic MIRb|SINE|MIR -29467 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr8-1352 chr8 101288261 101288471 + 12.6 0.000 Intergenic Intergenic -80527 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr19-1714 chr19 42851314 42851524 + 12.6 0.000 intron (NR_026824, intron 2 of 6) LTR8B|LTR|ERV1 4299 NR_026824 653492 Hs.655399 NM_176809 PSG10P PSG10|PSG12 pregnancy specific beta-1-glycoprotein 10, pseudogene pseudo chr7-3690 chr7 50346884 50347094 + 12.6 0.000 intron (NM_001291840, intron 2 of 2) L3b|LINE|CR1 27941 NM_001291842 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr4-1749 chr4 119934979 119935189 + 12.6 0.000 Intergenic Intergenic -4456 NR_121639 100996694 Hs.119926 NR_121639 ENSG00000250392 LINC02502 - long intergenic non-protein coding RNA 2502 ncRNA chr22-1097 chr22 35315465 35315675 + 12.6 0.000 intron (NR_156428, intron 1 of 13) intron (NR_156428, intron 1 of 13) 15676 NM_005488 10043 Hs.474705 NM_005488 ENSG00000100284 TOM1 - target of myb1 membrane trafficking protein protein-coding chr9-1799 chr9 35962205 35962415 + 12.6 0.000 Intergenic Intergenic -4156 NM_019897 56656 Hs.553540 NM_019897 ENSG00000278889 OR2S2 OR37A|OST715 olfactory receptor family 2 subfamily S member 2 (gene/pseudogene) protein-coding chr1-3852 chr1 35449523 35449733 + 12.6 0.000 intron (NM_024874, intron 15 of 20) MIRc|SINE|MIR -83551 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr17-2085 chr17 80575462 80575672 + 12.6 0.000 intron (NM_020761, intron 1 of 33) intron (NM_020761, intron 1 of 33) 30729 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr11-1980 chr11 26753901 26754111 + 12.6 0.000 Intergenic Intergenic -31946 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr7-2234 chr7 131522656 131522866 + 12.6 0.000 intron (NM_001018111, intron 1 of 8) L1MB8|LINE|L1 33867 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr17-3797 chr17 39808585 39808795 + 12.6 0.000 intron (NM_001257409, intron 2 of 5) intron (NM_001257409, intron 2 of 5) -30465 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr16-1242 chr16 1858345 1858555 + 12.6 0.000 intron (NM_001163560, intron 5 of 13) intron (NM_001163560, intron 5 of 13) 13714 NM_001163560 254528 Hs.729604 NM_152764 ENSG00000162039 MEIOB C16orf73|SPGF22|gs129 meiosis specific with OB-fold protein-coding chr12-1666 chr12 56763201 56763411 + 12.6 0.000 promoter-TSS (NM_003725) promoter-TSS (NM_003725) -18 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr2-5621 chr2 188518283 188518493 + 12.6 0.000 intron (NM_001252669, intron 4 of 8) LTR16A2|LTR|ERVL 220896 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr1-7263 chr1 231357986 231358196 + 12.6 0.000 Intergenic Intergenic 19798 NM_032018 83932 Hs.554892 NM_032018 ENSG00000010072 SPRTN C1orf124|DVC1|PRO4323|spartan SprT-like N-terminal domain protein-coding chr2-3280 chr2 29459985 29460195 + 12.6 0.000 intron (NM_004304, intron 4 of 28) intron (NM_004304, intron 4 of 28) 15287 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr9-3084 chr9 19232443 19232653 + 12.6 0.000 intron (NR_073201, intron 1 of 31) intron (NR_073201, intron 1 of 31) 1855 NM_017925 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr17-2488 chr17 77602272 77602482 + 12.6 0.000 Intergenic Intergenic 55436 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr5-4213 chr5 123845169 123845379 + 12.6 0.000 Intergenic Intergenic 299857 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chrX-372 chrX 96684673 96684883 + 12.6 0.000 promoter-TSS (NM_006729) promoter-TSS (NM_006729) -64 NM_006729 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr18-307 chr18 45974046 45974256 + 12.6 0.000 Intergenic Intergenic -6822 NM_020964 57724 Hs.514843 NM_020964 ENSG00000152223 EPG5 HEEW1|KIAA1632|VICIS ectopic P-granules autophagy protein 5 homolog protein-coding chr2-3335 chr2 201471774 201471984 + 12.6 0.000 intron (NM_018571, intron 4 of 11) intron (NM_018571, intron 4 of 11) 20139 NM_018571 55437 Hs.652338 NM_018571 ENSG00000082146 STRADB ALS2CR2|CALS-21|ILPIP|ILPIPA|PAPK|PRO1038 STE20 related adaptor beta protein-coding chr13-1589 chr13 39977364 39977574 + 12.6 0.000 Intergenic Intergenic -204340 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr12-1469 chr12 6771161 6771371 + 12.6 0.000 TTS (NM_001330333) TTS (NM_001330333) -1254 NM_002286 3902 Hs.409523 NM_002286 ENSG00000089692 LAG3 CD223 lymphocyte activating 3 protein-coding chr19-1780 chr19 42932815 42933025 + 12.6 0.000 intron (NM_001206650, intron 1 of 4) LTR8B|LTR|ERV1 4258 NM_001290042 5676 Hs.709203 NM_002783 ENSG00000221878 PSG7 PSBG-7|PSG1|PSGGA pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene) protein-coding chr9-802 chr9 75088498 75088708 + 12.6 0.000 promoter-TSS (NM_012383) promoter-TSS (NM_012383) 89 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr9-1472 chr9 98380336 98380546 + 12.6 0.000 intron (NM_005458, intron 11 of 18) OldhAT1|DNA|hAT-Ac -124792 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr14-1400 chr14 54796996 54797206 + 12.6 0.000 Intergenic Intergenic 42268 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr3-4488 chr3 54192321 54192531 + 12.6 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 69874 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chrX-1591 chrX 85343702 85343912 + 12.6 0.000 intron (NM_001307940, intron 6 of 15) intron (NM_001307940, intron 6 of 15) 35858 NM_024921 79983 Hs.267038 NM_024921 ENSG00000124429 POF1B POF|POF2B POF1B actin binding protein protein-coding chr18-1042 chr18 3817071 3817281 + 12.6 0.000 intron (NM_001242761, intron 4 of 11) intron (NM_001242761, intron 4 of 11) 28182 NM_001242765 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr2-8193 chr2 88549673 88549883 + 12.6 0.000 intron (NR_110236, intron 2 of 2) intron (NR_110236, intron 2 of 2) 11058 NR_110236 101928371 Hs.738045 NR_110236 ENSG00000225420 LOC101928371 - uncharacterized LOC101928371 ncRNA chr10-1254 chr10 102227120 102227330 + 12.6 0.000 intron (NM_152310, intron 1 of 3) intron (NM_152310, intron 1 of 3) 926 NM_152310 83401 Hs.302130 NM_152310 ENSG00000119915 ELOVL3 CIG-30|CIG30 ELOVL fatty acid elongase 3 protein-coding chr19-1185 chr19 35030288 35030498 + 12.6 0.000 promoter-TSS (NM_199037) promoter-TSS (NM_199037) -77 NM_199037 6324 Hs.436646 NM_001037 ENSG00000105711 SCN1B ATFB13|BRGDA5|EIEE52|GEFSP1 sodium voltage-gated channel beta subunit 1 protein-coding chr19-1339 chr19 14435115 14435325 + 12.6 0.000 intron (NM_002741, intron 1 of 21) intron (NM_002741, intron 1 of 21) 1914 NM_002741 5585 Hs.466044 NM_002741 ENSG00000123143 PKN1 DBK|PAK-1|PAK1|PKN|PKN-ALPHA|PRK1|PRKCL1 protein kinase N1 protein-coding chr3-4130 chr3 116768825 116769035 + 12.6 0.000 Intergenic Intergenic 59142 NR_015391 285194 Hs.120364 NR_015391 TUSC7 LINC00902|LSAMP-AS1|LSAMP-AS3|LSAMPAS3|NCRNA00295 tumor suppressor candidate 7 ncRNA chr17-1981 chr17 41959871 41960081 + 12.6 0.000 intron (NR_146622, intron 10 of 11) intron (NR_146622, intron 10 of 11) -6819 NM_033133 1267 Hs.273621 NM_033133 ENSG00000173786 CNP CNP1 2',3'-cyclic nucleotide 3' phosphodiesterase protein-coding chr2-2454 chr2 74894717 74894927 + 12.6 0.000 Intergenic Intergenic -14309 NR_125792 102724515 Hs.708649 NR_125792 ENSG00000204792 LINC01291 - long intergenic non-protein coding RNA 1291 ncRNA chr22-555 chr22 24155799 24156009 + 12.6 0.000 intron (NM_012295, intron 29 of 36) intron (NM_012295, intron 29 of 36) -25583 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr15-983 chr15 62758306 62758516 + 12.6 0.000 intron (NM_015059, intron 34 of 55) intron (NM_015059, intron 34 of 55) -65546 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr2-10005 chr2 23111197 23111407 + 12.6 0.000 Intergenic Intergenic -273877 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr9-2742 chr9 97419515 97419725 + 12.6 0.000 intron (NM_001302884, intron 1 of 15) intron (NM_001302884, intron 1 of 15) 7524 NM_014290 23424 Hs.193842 NM_014290 ENSG00000196116 TDRD7 CATC4|PCTAIRE2BP|TRAP tudor domain containing 7 protein-coding chr21-518 chr21 35573907 35574117 + 12.6 0.000 intron (NR_073512, intron 1 of 2) LTR85a|LTR|Gypsy? 6752 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr8-2131 chr8 144187607 144187817 + 12.6 0.000 intron (NM_001099281, intron 6 of 11) intron (NM_001099281, intron 6 of 11) 39067 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr6-1158 chr6 16704148 16704358 + 12.6 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 55931 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr15-733 chr15 75175761 75175971 + 12.6 0.000 Intergenic MIR3|SINE|MIR -26016 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr8-2103 chr8 140240057 140240267 + 12.6 0.000 intron (NM_001160372, intron 16 of 22) intron (NM_001160372, intron 16 of 22) -139627 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr1-3690 chr1 172699164 172699374 + 12.6 0.000 Intergenic Intergenic 40166 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr1-2482 chr1 112391009 112391219 + 12.6 0.000 Intergenic Intergenic -5100 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr1-4494 chr1 22077706 22077916 + 12.6 0.000 intron (NM_001039802, intron 2 of 6) intron (NM_001039802, intron 2 of 6) 25102 NM_044472 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr13-954 chr13 102393962 102394172 + 12.6 0.000 promoter-TSS (NR_036487) promoter-TSS (NR_036487) 452 NR_036486 283480 Hs.662212 NR_036486 ENSG00000243319 FGF14-IT1 - FGF14 intronic transcript 1 ncRNA chr6-3783 chr6 19052380 19052590 + 12.6 0.000 Intergenic MSTA|LTR|ERVL-MaLR 127995 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr1-5947 chr1 26182029 26182239 + 12.6 0.000 intron (NM_006314, intron 4 of 20) intron (NM_006314, intron 4 of 20) 4643 NM_001297647 10256 Hs.16232 NM_006314 ENSG00000142675 CNKSR1 CNK|CNK1 connector enhancer of kinase suppressor of Ras 1 protein-coding chr15-612 chr15 78944796 78945006 + 12.6 0.000 exon (NM_004390, exon 1 of 12) exon (NM_004390, exon 1 of 12) 197 NM_004390 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr7-2044 chr7 101602426 101602636 + 12.6 0.000 Intergenic Intergenic 26765 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr19-1653 chr19 19296974 19297184 + 12.6 0.000 exon (NM_172231, exon 8 of 14) exon (NM_172231, exon 8 of 14) 23430 NM_172231 57794 Hs.515274 NM_021164 ENSG00000105705 SUGP1 F23858|RBP|SF4 SURP and G-patch domain containing 1 protein-coding chrX-661 chrX 130174239 130174449 + 12.6 0.000 intron (NM_004794, intron 1 of 1) intron (NM_004794, intron 1 of 1) 2382 NM_004794 9363 Hs.654356 NM_004794 ENSG00000134594 RAB33A RabS10 RAB33A, member RAS oncogene family protein-coding chr9-1694 chr9 95516795 95517005 + 12.6 0.000 promoter-TSS (NM_001083603) promoter-TSS (NM_001083603) 65 NM_001083603 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr13-1719 chr13 96106072 96106282 + 12.6 0.000 intron (NM_153456, intron 1 of 1) MLT1F1|LTR|ERVL-MaLR 15338 NM_153456 266722 Hs.171001 NM_153456 ENSG00000185352 HS6ST3 HS6ST-3 heparan sulfate 6-O-sulfotransferase 3 protein-coding chr5-669 chr5 163459823 163460033 + 12.6 0.000 promoter-TSS (NM_012485) promoter-TSS (NM_012485) 174 NR_138426 134492 Hs.140443 NM_145266 ENSG00000170584 NUDCD2 NudCL2 NudC domain containing 2 protein-coding chr17-3682 chr17 13266890 13267100 + 12.6 0.000 Intergenic Intergenic 39765 NR_146885 105371541 NR_146885 ENSG00000234634 LINC02093 - long intergenic non-protein coding RNA 2093 ncRNA chr4-3651 chr4 24042092 24042302 + 12.6 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -152150 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr12-1834 chr12 25187861 25188071 + 12.6 0.000 intron (NM_001204102, intron 2 of 16) L1MEd|LINE|L1 7194 NM_001352064 55259 Hs.407771 NM_018272 ENSG00000118307 CASC1 LAS1|PPP1R54 cancer susceptibility 1 protein-coding chr5-2191 chr5 147565513 147565723 + 12.6 0.000 intron (NR_038902, intron 1 of 3) intron (NR_038902, intron 1 of 3) 5624 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA chr12-1610 chr12 63152008 63152218 + 12.6 0.000 5' UTR (NM_000706, exon 1 of 2) 5' UTR (NM_000706, exon 1 of 2) 697 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr12-1198 chr12 110043152 110043362 + 12.6 0.000 intron (NM_207435, intron 4 of 4) L2a|LINE|L2 5390 NR_148516 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr7-3130 chr7 51206772 51206982 + 12.6 0.000 intron (NM_015198, intron 2 of 12) L1MA9|LINE|L1 109932 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr6-1228 chr6 127267557 127267767 + 12.6 0.000 intron (NM_001242852, intron 1 of 4) intron (NM_001242852, intron 1 of 4) 824 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr6-3017 chr6 48305559 48305769 + 12.6 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -236975 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr2-4664 chr2 201191496 201191706 + 12.6 0.000 intron (NM_032977, intron 3 of 9) intron (NM_032977, intron 3 of 9) 8460 NM_001230 843 Hs.5353 NM_001230 ENSG00000003400 CASP10 ALPS2|FLICE2|MCH4 caspase 10 protein-coding chr18-281 chr18 35617062 35617272 + 12.6 0.000 Intergenic Intergenic 25430 NR_039771 100616257 NR_039771 ENSG00000283514 MIR3975 - microRNA 3975 ncRNA chr4-1482 chr4 16952805 16953015 + 12.6 0.000 Intergenic Intergenic -54101 NM_001304435 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr12-890 chr12 101857199 101857409 + 12.6 0.000 Intergenic Intergenic -20276 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr14-2699 chr14 84340821 84341031 + 12.6 0.000 Intergenic Intergenic -931006 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr8-989 chr8 125513237 125513447 + 12.6 0.000 Intergenic Intergenic 81133 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr22-1346 chr22 23709243 23709453 + 12.6 0.000 intron (NR_024448, intron 4 of 11) L1MA6|LINE|L1 8075 NR_024448 91316 Hs.148656 NR_024448 ENSG00000228315 GUSBP11 - GUSB pseudogene 11 pseudo chr3-4620 chr3 13092012 13092222 + 12.6 0.000 Intergenic Intergenic -18688 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr3-2676 chr3 47962893 47963103 + 12.6 0.000 intron (NM_002375, intron 3 of 18) intron (NM_002375, intron 3 of 18) 113443 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr7-5790 chr7 78746436 78746646 + 12.6 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -262447 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr3-4366 chr3 185759107 185759317 + 12.6 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) 8692 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr4-1219 chr4 147158453 147158663 + 12.6 0.000 Intergenic Intergenic 186159 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA chr12-1914 chr12 85016376 85016586 + 12.6 0.000 intron (NM_001100917, intron 7 of 8) MER44B|DNA|TcMar-Tigger 19796 NM_001100917 144448 Hs.156962 NM_001100917 ENSG00000231738 TSPAN19 - tetraspanin 19 protein-coding chr22-1050 chr22 42047261 42047471 + 12.6 0.000 Intergenic Intergenic 23446 NM_000262 4668 Hs.75372 NM_000262 ENSG00000198951 NAGA D22S674|GALB alpha-N-acetylgalactosaminidase protein-coding chr11-1851 chr11 94948442 94948652 + 12.6 0.000 Intergenic Intergenic 25009 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr3-3055 chr3 126746534 126746744 + 12.6 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 42399 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr1-4289 chr1 17128394 17128604 + 12.6 0.000 Intergenic LTR24B|LTR|ERV1 -9048 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr2-2172 chr2 8685100 8685310 + 12.6 0.000 TTS (NM_002166) TTS (NM_002166) 3149 NM_002166 3398 Hs.180919 NM_002166 ENSG00000115738 ID2 GIG8|ID2A|ID2H|bHLHb26 inhibitor of DNA binding 2 protein-coding chr7-3348 chr7 92255377 92255587 + 12.6 0.000 intron (NM_019004, intron 1 of 19) MLT1J|LTR|ERVL-MaLR -9382 NM_001350682 889 Hs.531987 NM_004912 ENSG00000001631 KRIT1 CAM|CCM1 KRIT1 ankyrin repeat containing protein-coding chr13-472 chr13 44436707 44436917 + 12.6 0.000 promoter-TSS (NM_006022) promoter-TSS (NM_006022) 46 NM_006022 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chrX-1660 chrX 149146856 149147066 + 12.6 0.000 Intergenic MER52A|LTR|ERV1 358345 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr8-848 chr8 143853599 143853809 + 12.6 0.000 Intergenic L1MEf|LINE|L1 -12731 NM_178564 340371 Hs.521926 NM_178564 ENSG00000185189 NRBP2 TRG16|pp9320 nuclear receptor binding protein 2 protein-coding chr1-11026 chr1 222044009 222044219 + 12.6 0.000 Intergenic Intergenic -65594 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr5-3297 chr5 120516840 120517050 + 12.6 0.000 intron (NM_016644, intron 2 of 2) intron (NM_016644, intron 2 of 2) -14519 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr1-10185 chr1 110940615 110940825 + 12.6 0.000 Intergenic L1MA2|LINE|L1 23202 NM_018372 55791 Hs.25245 NM_018372 ENSG00000121931 LRIF1 C1orf103|HBiX1|RIF1 ligand dependent nuclear receptor interacting factor 1 protein-coding chr11-3729 chr11 21350554 21350764 + 12.6 0.000 intron (NM_201551, intron 14 of 18) L2c|LINE|L2 681073 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr3-3004 chr3 101567570 101567780 + 12.6 0.000 Intergenic L2a|LINE|L2 5807 NM_017819 54931 Hs.594839 NM_017819 ENSG00000174173 TRMT10C COXPD30|HNYA|MRPP1|RG9MTD1 tRNA methyltransferase 10C, mitochondrial RNase P subunit protein-coding chr21-311 chr21 46131595 46131805 + 12.6 0.000 intron (NM_001849, intron 27 of 27) intron (NM_001849, intron 27 of 27) -19675 NM_001350598 100861507 Hs.570448 NM_001350598 FTCD-AS1 - FTCD antisense RNA 1 protein-coding chr22-1390 chr22 37813327 37813537 + 12.6 0.000 intron (NM_014291, intron 3 of 8) intron (NM_014291, intron 3 of 8) 5527 NM_001171690 23464 Hs.54609 NM_014291 ENSG00000100116 GCAT KBL glycine C-acetyltransferase protein-coding chr16-3165 chr16 80997405 80997615 + 12.6 0.000 5' UTR (NM_001351973, exon 1 of 3) 5' UTR (NM_001351973, exon 1 of 3) 166 NM_001351973 56942 Hs.55028 NM_020188 ENSG00000103121 CMC2 2310061C15Rik|C16orf61|DC13 C-X9-C motif containing 2 protein-coding chr1-7222 chr1 223631585 223631795 + 12.6 0.000 intron (NM_001143962, intron 2 of 20) intron (NM_001143962, intron 2 of 20) 34011 NM_001143962 388743 Hs.291487 NM_001143962 ENSG00000203697 CAPN8 nCL-2 calpain 8 protein-coding chr3-2221 chr3 33716926 33717136 + 12.6 0.000 intron (NM_001365634, intron 1 of 35) intron (NM_001365634, intron 1 of 35) 1223 NM_001365632 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr5-1807 chr5 73201930 73202140 + 12.6 0.000 promoter-TSS (NR_134291) promoter-TSS (NR_134291) -74 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr9-1168 chr9 62802531 62802741 + 12.6 0.000 intron (NR_121647, intron 1 of 4) CpG 1171 NR_121647 103352539 Hs.351215 NR_121647 ENSG00000238113 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA chr9-1983 chr9 115998780 115998990 + 12.6 0.000 Intergenic Intergenic -73678 NR_024032 58483 Hs.23367 NR_024032 ENSG00000204148 LINC00474 C9orf27|EST-YD1 long intergenic non-protein coding RNA 474 ncRNA chr12-5378 chr12 120049099 120049309 + 12.6 0.000 intron (NR_147894, intron 3 of 8) L2c|LINE|L2 59360 NR_147893 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chrX-1456 chrX 97215221 97215431 + 12.6 0.000 intron (NM_007309, intron 22 of 26) intron (NM_007309, intron 22 of 26) 331418 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr12-4766 chr12 52798022 52798232 + 12.6 0.000 Intergenic Intergenic -2010 NM_057088 3850 Hs.680652 NM_057088 ENSG00000186442 KRT3 CK3|K3 keratin 3 protein-coding chr2-3381 chr2 19121438 19121648 + 12.6 0.000 Intergenic Intergenic -94572 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr5-1176 chr5 38464277 38464487 + 12.6 0.000 3' UTR (NM_001205301, exon 23 of 23) 3' UTR (NM_001205301, exon 23 of 23) 18836 NM_182801 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr3-2150 chr3 127327715 127327925 + 12.6 0.000 intron (NR_110147, intron 3 of 4) PRIMA4-int|LTR|ERV1 -39774 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr3-1999 chr3 196193261 196193471 + 12.6 0.000 Intergenic MIR|SINE|MIR 18034 NR_135617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr4-1861 chr4 169225578 169225788 + 12.6 0.000 intron (NM_020870, intron 2 of 11) L2a|LINE|L2 45273 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr3-6847 chr3 149342728 149342938 + 12.6 0.000 Intergenic L1ME4b|LINE|L1 -9197 NM_138786 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr7-6281 chr7 137482515 137482725 + 12.6 0.000 intron (NM_001321710, intron 24 of 32) L2|LINE|L2 -138887 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chrX-446 chrX 102959860 102960070 + 12.6 0.000 intron (NR_146589, intron 11 of 11) L1PA15|LINE|L1 22693 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr12-5491 chr12 125545061 125545271 + 12.6 0.000 intron (NM_052907, intron 4 of 8) intron (NM_052907, intron 4 of 8) -77286 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr8-3617 chr8 143927349 143927559 + 12.6 0.000 exon (NM_201380, exon 27 of 32) exon (NM_201380, exon 27 of 32) 12143 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr10-1643 chr10 95725761 95725971 + 12.6 0.000 intron (NM_001098175, intron 1 of 9) L1M4a1|LINE|L1 14102 NM_001098175 953 Hs.576612 NM_001776 ENSG00000138185 ENTPD1 ATPDase|CD39|NTPDase-1|SPG64 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding chrX-462 chrX 152941561 152941771 + 12.6 0.000 promoter-TSS (NM_001178115) promoter-TSS (NM_001178115) -5 NM_001178115 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr1-2656 chr1 178238982 178239192 + 12.6 0.000 intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) -102364 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr6-1278 chr6 107241902 107242112 + 12.6 0.000 intron (NM_020381, intron 4 of 7) intron (NM_020381, intron 4 of 7) -126492 NM_001367314 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr11-1885 chr11 11620374 11620584 + 12.6 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 1526 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr8-2472 chr8 133000183 133000393 + 12.6 0.000 intron (NM_003235, intron 35 of 47) Charlie17a|DNA|hAT-Charlie 46293 NR_107002 102466865 NR_107002 ENSG00000276961 MIR7848 hsa-mir-7848 microRNA 7848 ncRNA chr7-1639 chr7 33459428 33459638 + 12.6 0.000 intron (NM_001348037, intron 18 of 20) intron (NM_001348037, intron 18 of 20) 329969 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr9-1421 chr9 128684948 128685158 + 12.6 0.000 promoter-TSS (NM_001248000) promoter-TSS (NM_001248000) -19 NM_001248000 6418 Hs.436687 NM_003011 ENSG00000119335 SET 2PP2A|I2PP2A|IGAAD|IPP2A2|MRD58|PHAPII|TAF-I|TAF-IBETA SET nuclear proto-oncogene protein-coding chr8-1952 chr8 57912614 57912824 + 12.6 0.000 Intergenic Intergenic -65639 NR_130934 100505477 Hs.434693 NR_130934 ENSG00000205293 LINC01602 T1560 long intergenic non-protein coding RNA 1602 ncRNA chr1-4074 chr1 214228157 214228367 + 12.6 0.000 Intergenic MER57D|LTR|ERV1 -52897 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr20-1612 chr20 10540758 10540968 + 12.6 0.000 intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 105558 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr1-7081 chr1 186050428 186050638 + 12.6 0.000 intron (NM_031935, intron 42 of 106) L2|LINE|L2 -245740 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr2-5371 chr2 97700239 97700449 + 12.6 0.000 intron (NR_038386, intron 8 of 9) intron (NR_038386, intron 8 of 9) -13224 NM_001079 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr3-1961 chr3 58052371 58052581 + 12.6 0.000 intron (NM_001164318, intron 1 of 45) MARNA|DNA|TcMar-Mariner 44054 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr3-4328 chr3 177182529 177182739 + 12.6 0.000 intron (NM_001321194, intron 1 of 16) L2c|LINE|L2 13844 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr2-4817 chr2 55093530 55093740 + 12.6 0.000 intron (NM_001321904, intron 1 of 9) intron (NM_001321904, intron 1 of 9) -42363 NM_001321859 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr12-1619 chr12 93880101 93880311 + 12.6 0.000 intron (NR_135147, intron 3 of 3) intron (NR_135147, intron 3 of 3) 63400 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr3-6126 chr3 54642270 54642480 + 12.6 0.000 intron (NM_018398, intron 11 of 37) intron (NM_018398, intron 11 of 37) -2518 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr1-2781 chr1 177847964 177848174 + 12.6 0.000 Intergenic Intergenic 121853 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr15-512 chr15 65049403 65049613 + 12.6 0.000 intron (NM_178859, intron 1 of 3) intron (NM_178859, intron 1 of 3) 4121 NM_178859 123264 Hs.27018 NM_178859 ENSG00000186198 SLC51B OSTB|OSTBETA solute carrier family 51 beta subunit protein-coding chr1-4121 chr1 245837765 245837975 + 12.6 0.000 intron (NM_022743, intron 10 of 11) intron (NM_022743, intron 10 of 11) 579542 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr19-3544 chr19 45123362 45123572 + 12.6 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 30288 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr8-3201 chr8 120089500 120089710 + 12.6 0.000 Intergenic MER3|DNA|hAT-Charlie -35497 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr15-2792 chr15 35557486 35557696 + 12.6 0.000 intron (NR_038251, intron 1 of 2) intron (NR_038251, intron 1 of 2) 11396 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr12-1691 chr12 114744821 114745031 + 12.6 0.000 Intergenic Intergenic -60751 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr17-2707 chr17 61647071 61647281 + 12.6 0.000 Intergenic Intergenic -55957 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr2-4108 chr2 149924024 149924234 + 12.6 0.000 Intergenic Intergenic -64938 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr22-621 chr22 29344352 29344562 + 12.6 0.000 intron (NM_001166019, intron 11 of 20) intron (NM_001166019, intron 11 of 20) -11199 NR_003686 100113380 NR_003686 ENSG00000239127 SNORD125 - small nucleolar RNA, C/D box 125 snoRNA chr11-1928 chr11 70203911 70204121 + 12.6 0.000 intron (NM_003824, intron 1 of 1) intron (NM_003824, intron 1 of 1) 853 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr15-3380 chr15 86768234 86768444 + 12.6 0.000 intron (NM_152336, intron 23 of 24) (ATAAC)n|Simple_repeat|Simple_repeat -164541 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr12-3543 chr12 132695703 132695913 + 12.6 0.000 intron (NM_018663, intron 2 of 4) intron (NM_018663, intron 2 of 4) 8221 NM_018663 5827 Hs.430299 NM_018663 ENSG00000176894 PXMP2 PMP22 peroxisomal membrane protein 2 protein-coding chr12-1920 chr12 94305533 94305743 + 12.6 0.000 TTS (NM_001346457) TTS (NM_001346457) 43117 NR_037687 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr19-1037 chr19 12919394 12919604 + 12.6 0.000 promoter-TSS (NR_049880) promoter-TSS (NR_049880) -206 NM_001105578 256126 Hs.655173 NM_001105578 ENSG00000161860 SYCE2 CESC1 synaptonemal complex central element protein 2 protein-coding chr15-855 chr15 77824109 77824319 + 12.6 0.000 Intergenic Intergenic -3314 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr12-2089 chr12 26033031 26033241 + 12.6 0.000 intron (NM_001164747, intron 2 of 5) intron (NM_001164747, intron 2 of 5) -19428 NM_001164746 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr19-1322 chr19 52171556 52171766 + 12.6 0.000 promoter-TSS (NM_001102657) promoter-TSS (NM_001102657) -40 NM_001102657 162962 Hs.631584 NM_001102657 ENSG00000196267 ZNF836 - zinc finger protein 836 protein-coding chr9-4536 chr9 76962582 76962792 + 12.6 0.000 Intergenic Intergenic -56573 NM_015225 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr3-2715 chr3 77043043 77043253 + 12.6 0.000 intron (NM_001290039, intron 1 of 26) MIR3|SINE|MIR 3049 NM_002942 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr17-2018 chr17 4897888 4898098 + 12.6 0.000 TTS (NM_170663) TTS (NM_170663) -1543 NM_001145536 100130311 Hs.579243 NM_001145536 ENSG00000205710 C17orf107 - chromosome 17 open reading frame 107 protein-coding chr11-1366 chr11 68857746 68857956 + 12.6 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -15920 NM_001031847 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr2-2644 chr2 169828543 169828753 + 12.6 0.000 intron (NM_172070, intron 1 of 38) intron (NM_172070, intron 1 of 38) 1140 NM_172070 130507 Hs.379548 NM_172070 ENSG00000144357 UBR3 ZNF650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding chr11-1660 chr11 3088134 3088344 + 12.6 0.000 exon (NM_145638, exon 21 of 21) exon (NM_145638, exon 21 of 21) -30816 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr6-2971 chr6 38537624 38537834 + 12.6 0.000 intron (NM_001172418, intron 5 of 10) intron (NM_001172418, intron 5 of 10) 56133 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr3-1664 chr3 174441428 174441638 + 12.6 0.000 Intergenic CpG -417801 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr3-4380 chr3 190152025 190152235 + 12.6 0.000 Intergenic Intergenic -29693 NM_001134418 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr1-3683 chr1 161217091 161217301 + 12.6 0.000 intron (NM_004106, intron 1 of 4) intron (NM_004106, intron 1 of 4) 1901 NM_004106 2207 Hs.433300 NM_004106 ENSG00000158869 FCER1G FCRG Fc fragment of IgE receptor Ig protein-coding chr13-1571 chr13 35791598 35791808 + 12.6 0.000 intron (NM_001195415, intron 12 of 13) intron (NM_001195415, intron 12 of 13) 63964 NM_001195416 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr2-8775 chr2 165300595 165300805 + 12.6 0.000 intron (NM_001040143, intron 4 of 27) L2a|LINE|L2 6645 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr17-2399 chr17 80891605 80891815 + 12.6 0.000 intron (NM_020761, intron 17 of 33) intron (NM_020761, intron 17 of 33) 79503 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr2-4708 chr2 231132057 231132267 + 12.6 0.000 intron (NM_001191037, intron 16 of 23) intron (NM_001191037, intron 16 of 23) -7120 NM_001320758 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chr7-3392 chr7 127654730 127654940 + 12.6 0.000 intron (NM_014390, intron 1 of 23) intron (NM_014390, intron 1 of 23) 2641 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr16-1395 chr16 86457581 86457791 + 12.6 0.000 Intergenic Intergenic 51174 NR_036444 400550 Hs.448825 NR_033925 ENSG00000268388 FENDRR FOXF1-AS1|FOXF1AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21 FOXF1 adjacent non-coding developmental regulatory RNA ncRNA chr4-1580 chr4 6553338 6553548 + 12.6 0.000 intron (NM_001206994, intron 1 of 9) intron (NM_001206994, intron 1 of 9) 2172 NM_001206995 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr6-5253 chr6 137003682 137003892 + 12.6 0.000 intron (NM_001278724, intron 5 of 5) intron (NM_001278724, intron 5 of 5) -10556 NR_027994 100294720 Hs.520412 NR_027994 ENSG00000225391 NHEG1 - neuroblastoma highly expressed 1 ncRNA chr8-3679 chr8 17140763 17140973 + 12.6 0.000 Intergenic MIR|SINE|MIR -15614 NM_016353 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr1-6050 chr1 85438294 85438504 + 12.6 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) 26760 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr2-11376 chr2 212052611 212052821 + 12.6 0.000 intron (NM_001042599, intron 2 of 26) LOR1b|LTR|ERV1 373644 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr12-978 chr12 50764544 50764754 + 12.6 0.000 intron (NM_005171, intron 1 of 6) CpG 548 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr13-784 chr13 47673056 47673266 + 12.6 0.000 Intergenic Intergenic 259461 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr11-2301 chr11 60842056 60842266 + 12.6 0.000 promoter-TSS (NM_024098) promoter-TSS (NM_024098) 48 NM_024098 79080 Hs.4253 NM_024098 ENSG00000110104 CCDC86 - coiled-coil domain containing 86 protein-coding chr17-3139 chr17 44381699 44381909 + 12.6 0.000 intron (NM_000419, intron 12 of 29) AluJr|SINE|Alu 7845 NM_000419 3674 Hs.411312 NM_000419 ENSG00000005961 ITGA2B BDPLT16|BDPLT2|CD41|CD41B|GP2B|GPIIb|GT|GTA|HPA3|PPP1R93 integrin subunit alpha 2b protein-coding chr3-3045 chr3 125024672 125024882 + 12.6 0.000 intron (NM_020733, intron 3 of 16) intron (NM_020733, intron 3 of 16) 31220 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr14-1949 chr14 28295712 28295922 + 12.6 0.000 Intergenic L1PREC2|LINE|L1 469502 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr1-6713 chr1 57999156 57999366 + 12.6 0.000 intron (NM_001353980, intron 1 of 5) MIRb|SINE|MIR 138680 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr15-1275 chr15 90557709 90557919 + 12.6 0.000 intron (NM_001042574, intron 2 of 14) intron (NM_001042574, intron 2 of 14) 27891 NM_001042574 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr2-4448 chr2 205438527 205438737 + 12.6 0.000 intron (NM_205863, intron 19 of 21) intron (NM_205863, intron 19 of 21) -243868 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr14-1559 chr14 69633274 69633484 + 12.6 0.000 intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 21783 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr6-1251 chr6 20187328 20187538 + 12.6 0.000 intron (NM_001080480, intron 1 of 12) intron (NM_001080480, intron 1 of 12) 25036 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr10-3288 chr10 241530 241740 + 12.6 0.000 intron (NM_001370109, intron 8 of 13) intron (NM_001370109, intron 8 of 13) 61641 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr8-4074 chr8 66380086 66380296 + 12.6 0.000 Intergenic Intergenic 48786 NR_040434 100505676 Hs.121613 NM_001242759 ENSG00000246145 RRS1-AS1 - RRS1 antisense RNA 1 (head to head) ncRNA chr5-3337 chr5 134029231 134029441 + 12.6 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -24361 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr1-4936 chr1 46614035 46614245 + 12.6 0.000 intron (NM_201403, intron 1 of 3) L2c|LINE|L2 993 NM_145279 148932 Hs.632401 NM_145279 ENSG00000142961 MOB3C MOB1E|MOBKL2C MOB kinase activator 3C protein-coding chr4-1614 chr4 55303928 55304138 + 12.6 0.000 Intergenic Intergenic -42209 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding chr11-2616 chr11 4493284 4493494 + 12.6 0.000 Intergenic LTR13|LTR|ERVK 4510 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr7-2188 chr7 94295867 94296077 + 12.6 0.000 Intergenic Intergenic 96220 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr2-3885 chr2 42360073 42360283 + 12.6 0.000 promoter-TSS (NR_134948) promoter-TSS (NR_134948) -140 NR_134948 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr15-841 chr15 56491310 56491520 + 12.6 0.000 Intergenic Intergenic -26278 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr2-4851 chr2 86837197 86837407 + 12.6 0.000 TTS (NM_004931) TTS (NM_004931) -24523 NR_037931 100286979 Hs.731217 NR_037931 ENSG00000233673 ANAPC1P1 - anaphase promoting complex subunit 1 pseudogene 1 pseudo chr6-3143 chr6 110232526 110232736 + 12.6 0.000 TTS (NM_015891) TTS (NM_015891) 52204 NM_015891 51362 Hs.428147 NM_015891 ENSG00000168438 CDC40 EHB3|PRP17|PRPF17 cell division cycle 40 protein-coding chr19-1215 chr19 5346240 5346450 + 12.6 0.000 Intergenic Intergenic -5533 NM_130854 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr7-2150 chr7 44869639 44869849 + 12.6 0.000 Intergenic Intergenic 12056 NR_039801 100616393 NR_039801 ENSG00000284261 MIR4657 mir-4657 microRNA 4657 ncRNA chr1-4136 chr1 2372657 2372867 + 12.6 0.000 intron (NM_001301060, intron 7 of 10) CpG 18792 NM_001301060 79906 Hs.642701 NM_024848 ENSG00000116151 MORN1 - MORN repeat containing 1 protein-coding chr7-3195 chr7 121083969 121084179 + 12.6 0.000 intron (NM_001105533, intron 4 of 17) intron (NM_001105533, intron 4 of 17) 94683 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr10-2249 chr10 101147374 101147584 + 12.6 0.000 Intergenic Intergenic -6213 NR_130724 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr1-7163 chr1 206979445 206979655 + 12.6 0.000 Intergenic Intergenic -8925 NM_032029 83953 Hs.145519 NM_032029 ENSG00000162897 FCAMR CD351|FCA/MR|FKSG87 Fc fragment of IgA and IgM receptor protein-coding chr19-1277 chr19 33398221 33398431 + 12.6 0.000 intron (NM_001166056, intron 10 of 12) intron (NM_001166056, intron 10 of 12) 23802 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr5-3461 chr5 163894639 163894849 + 12.6 0.000 Intergenic MER44B|DNA|TcMar-Tigger 389125 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr7-2034 chr7 80250032 80250242 + 12.6 0.000 Intergenic L2|LINE|L2 114353 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr18-1611 chr18 45676779 45676989 + 12.6 0.000 intron (NM_007163, intron 18 of 19) MIRb|SINE|MIR -47297 NM_001146036 6563 Hs.101307 NM_015865 ENSG00000141469 SLC14A1 HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE solute carrier family 14 member 1 (Kidd blood group) protein-coding chr6-2892 chr6 11909683 11909893 + 12.6 0.000 Intergenic Intergenic 91456 NR_125853 101928253 Hs.128163 NR_125853 LOC101928253 - uncharacterized LOC101928253 ncRNA chr8-1995 chr8 89858900 89859110 + 12.6 0.000 Intergenic Intergenic -42863 NM_004337 734 Hs.436445 NM_004337 ENSG00000164823 OSGIN2 C8orf1|hT41 oxidative stress induced growth inhibitor family member 2 protein-coding chr4-2960 chr4 108639652 108639862 + 12.6 0.000 Intergenic Intergenic -10828 NM_001267817 58505 Hs.445803 NM_021227 ENSG00000198856 OSTC DC2 oligosaccharyltransferase complex non-catalytic subunit protein-coding chr1-4102 chr1 231600467 231600677 + 12.6 0.000 intron (NR_034037, intron 1 of 1) intron (NR_034037, intron 1 of 1) 11518 NR_034037 100287814 Hs.25555 NR_034037 ENSG00000229228 LINC00582 - long intergenic non-protein coding RNA 582 ncRNA chr5-1777 chr5 34788993 34789203 + 12.6 0.000 intron (NM_015577, intron 3 of 17) intron (NM_015577, intron 3 of 17) -50066 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding chr2-2296 chr2 62215485 62215695 + 12.6 0.000 promoter-TSS (NM_001319075) promoter-TSS (NM_001319075) 69 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr16-2506 chr16 89667041 89667251 + 12.6 0.000 intron (NM_001271910, intron 2 of 2) LTR13|LTR|ERVK 9078 NR_073516 124045 Hs.655171 NM_153025 ENSG00000167523 SPATA33 C16orf55 spermatogenesis associated 33 protein-coding chr12-4485 chr12 19138610 19138820 + 12.6 0.000 intron (NM_019012, intron 3 of 25) intron (NM_019012, intron 3 of 25) 8982 NM_001190860 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr6-859 chr6 34791959 34792169 + 12.6 0.000 promoter-TSS (NM_017754) promoter-TSS (NM_017754) -19 NM_017754 54887 Hs.700656 NM_017754 ENSG00000065060 UHRF1BP1 C6orf107|ICBP90|dJ349A12.1 UHRF1 binding protein 1 protein-coding chr7-2415 chr7 79439947 79440157 + 12.6 0.000 intron (NM_001301128, intron 1 of 20) L2|LINE|L2 -12905 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr6-2324 chr6 112189035 112189245 + 12.6 0.000 exon (NM_001105207, exon 7 of 39) exon (NM_001105207, exon 7 of 39) -47456 NR_121193 101927640 Hs.510007 NR_121193 LOC101927640 - uncharacterized LOC101927640 ncRNA chr3-1685 chr3 15439182 15439392 + 12.6 0.000 3' UTR (NM_033083, exon 6 of 6) 3' UTR (NM_033083, exon 6 of 6) 11689 NM_033083 85403 Hs.716733 NM_033083 ENSG00000144597 EAF1 - ELL associated factor 1 protein-coding chr1-4064 chr1 209827662 209827872 + 12.6 0.000 promoter-TSS (NM_014388) promoter-TSS (NM_014388) -205 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 UTP25 C1orf107|DEF|DIEXF|DJ434O14.5 UTP25 small subunit processor component protein-coding chr9-1072 chr9 129318522 129318732 + 12.6 0.000 Intergenic Intergenic -2389 NR_149714 414318 Hs.449434 NR_149714 C9orf106 - chromosome 9 open reading frame 106 (putative) ncRNA chr1-3599 chr1 23930988 23931198 + 12.6 0.000 Intergenic Intergenic 2023 NR_039615 100616492 NR_039615 ENSG00000264926 MIR378F mir-378f microRNA 378f ncRNA chr18-1157 chr18 12012004 12012214 + 12.6 0.000 intron (NM_014214, intron 3 of 7) intron (NM_014214, intron 3 of 7) 30602 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr3-3541 chr3 46908387 46908597 + 12.6 0.000 Intergenic MER102b|DNA|hAT-Charlie 26243 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr12-1344 chr12 2998869 2999079 + 12.6 0.000 intron (NM_201441, intron 3 of 11) intron (NM_201441, intron 3 of 11) 39039 NM_201443 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr11-3490 chr11 108364362 108364572 + 12.6 0.000 intron (NR_147053, intron 10 of 12) intron (NR_147053, intron 10 of 12) 103062 NM_001351110 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr10-2323 chr10 58743652 58743862 + 12.6 0.000 intron (NM_001080512, intron 3 of 20) intron (NM_001080512, intron 3 of 20) 28742 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr19-1584 chr19 9435415 9435625 + 12.6 0.000 promoter-TSS (NM_001271314) promoter-TSS (NM_001271314) 53 NM_001370381 10781 Hs.656185 NM_006631 ENSG00000174652 ZNF266 HZF1 zinc finger protein 266 protein-coding chr17-1708 chr17 47790095 47790305 + 12.6 0.000 Intergenic CpG 31594 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding chr11-3301 chr11 98485217 98485427 + 12.6 0.000 Intergenic Intergenic -535627 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr7-1487 chr7 129166780 129166990 + 12.6 0.000 exon (NM_178562, exon 6 of 8) exon (NM_178562, exon 6 of 8) -21748 NM_005631 6608 Hs.437846 NM_005631 ENSG00000128602 SMO CRJS|FZD11|Gx|SMOH smoothened, frizzled class receptor protein-coding chr5-2879 chr5 93428924 93429134 + 12.6 0.000 intron (NR_109822, intron 2 of 2) intron (NR_109822, intron 2 of 2) 142314 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr12-1018 chr12 22800449 22800659 + 12.6 0.000 Intergenic LTR78|LTR|ERV1 175383 NM_001039481 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr17-4019 chr17 75688436 75688646 + 12.6 0.000 intron (NR_126037, intron 3 of 8) intron (NR_126037, intron 3 of 8) 21203 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr19-2022 chr19 57830265 57830475 + 12.6 0.000 promoter-TSS (NM_001204818) promoter-TSS (NM_001204818) 71 NM_001204818 100293516 Hs.658251 NM_001204818 ENSG00000269343 ZNF587B - zinc finger protein 587B protein-coding chr11-2247 chr11 86042005 86042215 + 12.6 0.000 intron (NM_001206947, intron 1 of 18) intron (NM_001206947, intron 1 of 18) 26974 NM_001206946 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr15-1279 chr15 96247596 96247806 + 12.6 0.000 intron (NR_125738, intron 2 of 4) L1PA16|LINE|L1 -78345 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr11-3772 chr11 59060553 59060763 + 12.6 0.000 Intergenic MamRep1527|LTR|LTR -2206 NR_033853 283194 NR_033853 ENSG00000255240 LOC283194 - uncharacterized LOC283194 ncRNA chr7-3198 chr7 124258988 124259198 + 12.6 0.000 Intergenic MIRb|SINE|MIR 93003 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr2-5801 chr2 230915980 230916190 + 12.6 0.000 intron (NM_005683, intron 1 of 1) intron (NM_005683, intron 1 of 1) 9157 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr4-1909 chr4 39465117 39465327 + 12.6 0.000 intron (NM_194451, intron 5 of 9) intron (NM_194451, intron 5 of 9) 6166 NM_001363700 11019 Hs.550502 NM_006859 ENSG00000121897 LIAS HGCLAS|HUSSY-01|LAS|LIP1|LS|PDHLD lipoic acid synthetase protein-coding chr8-2055 chr8 120347054 120347264 + 12.6 0.000 intron (NM_021110, intron 45 of 47) intron (NM_021110, intron 45 of 47) 97991 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr16-3349 chr16 29779099 29779309 + 12.6 0.000 intron (NM_152338, intron 1 of 3) intron (NM_152338, intron 1 of 3) 948 NM_152338 653808 Hs.632195 NM_152338 ENSG00000174992 ZG16 JCLN|JCLN1|ZG16A zymogen granule protein 16 protein-coding chr2-3051 chr2 85996633 85996843 + 12.6 0.000 Intergenic Intergenic 107458 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr5-2430 chr5 122183892 122184102 + 12.6 0.000 Intergenic Intergenic 23821 NM_001195535 100505841 Hs.733368 NM_001195535 LOC100505841 - zinc finger protein 474-like protein-coding chr6-3928 chr6 81341075 81341285 + 12.6 0.000 Intergenic HERV17-int|LTR|ERV1 411501 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr2-2870 chr2 175871413 175871623 + 12.6 0.000 Intergenic Intergenic 130749 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr9-2065 chr9 36149289 36149499 + 12.6 0.000 intron (NM_001287010, intron 3 of 3) intron (NM_001287010, intron 3 of 3) 12609 NM_001287013 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr5-1323 chr5 123274102 123274312 + 12.6 0.000 Intergenic Intergenic 149385 NM_153223 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr6-3232 chr6 143674601 143674811 + 12.6 0.000 intron (NM_014721, intron 1 of 12) intron (NM_014721, intron 1 of 12) -3259 NM_001100165 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr4-1711 chr4 177316214 177316424 + 12.6 0.000 intron (NM_018248, intron 1 of 9) intron (NM_018248, intron 1 of 9) 6445 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chrX-1594 chrX 87926851 87927061 + 12.6 0.000 Intergenic L1PREC2|LINE|L1 409154 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr20-1643 chr20 20258830 20259040 + 12.6 0.000 intron (NM_015585, intron 20 of 26) MIR|SINE|MIR -109169 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr13-2309 chr13 32169076 32169286 + 12.6 0.000 intron (NM_023037, intron 17 of 60) intron (NM_023037, intron 17 of 60) 137407 NM_023037 10129 Hs.507669 NM_023037 ENSG00000073910 FRY 13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1 FRY microtubule binding protein protein-coding chr3-4995 chr3 20826408 20826618 + 12.6 0.000 Intergenic Intergenic 484045 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr13-772 chr13 24992798 24993008 + 12.6 0.000 Intergenic L2|LINE|L2 -24434 NR_026730 646405 Hs.620592 NM_001126062 TPTE2P1 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 pseudo chr5-1713 chr5 136058172 136058382 + 12.6 0.000 intron (NM_000358, intron 12 of 16) intron (NM_000358, intron 12 of 16) 22321 NR_030583 100126299 NR_030583 ENSG00000278815 VTRNA2-1 CBL-3|CBL3|MIR886|MIRN886|VTRNA2|hsa-mir-886|hvg-5|nc886|pre-miR-886|svtRNA2-1a vault RNA 2-1 ncRNA chr18-718 chr18 25299130 25299340 + 12.6 0.000 intron (NM_001308225, intron 2 of 6) intron (NM_001308225, intron 2 of 6) 52931 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr2-1657 chr2 54015966 54016176 + 12.6 0.000 intron (NM_001320587, intron 2 of 5) intron (NM_001320587, intron 2 of 5) 44958 NM_001320587 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr9-1463 chr9 37350919 37351129 + 12.6 0.000 intron (NR_110317, intron 6 of 7) intron (NR_110317, intron 6 of 7) -71672 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr5-2053 chr5 126517029 126517239 + 12.6 0.000 Intergenic L3b|LINE|CR1 51984 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chrX-588 chrX 111041055 111041265 + 12.6 0.000 intron (NM_001128166, intron 2 of 15) intron (NM_001128166, intron 2 of 15) -55031 NM_001324326 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr15-1001 chr15 70853462 70853672 + 12.6 0.000 5' UTR (NM_001286679, exon 1 of 3) 5' UTR (NM_001286679, exon 1 of 3) 251 NM_001286679 55323 Hs.416755 NM_018357 ENSG00000166173 LARP6 ACHN La ribonucleoprotein domain family member 6 protein-coding chr7-5365 chr7 31047728 31047938 + 12.6 0.000 Intergenic Intergenic -4475 NM_001199636 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr7-2002 chr7 21664958 21665168 + 12.6 0.000 intron (NM_001277115, intron 30 of 81) (TCTC)n|Simple_repeat|Simple_repeat 122024 NM_001277115 8701 Hs.520245 NM_001277115 ENSG00000105877 DNAH11 CILD7|DNAHBL|DNAHC11|DNHBL|DPL11 dynein axonemal heavy chain 11 protein-coding chr19-1307 chr19 14505972 14506182 + 12.6 0.000 Intergenic Intergenic -9928 NM_202494 10755 Hs.655012 NM_005716 ENSG00000123159 GIPC1 C19orf3|GIPC|GLUT1CBP|Hs.6454|IIP-1|NIP|RGS19IP1|SEMCAP|SYNECTIIN|SYNECTIN|TIP-2 GIPC PDZ domain containing family member 1 protein-coding chr12-3748 chr12 42631659 42631869 + 12.6 0.000 intron (NR_110042, intron 4 of 5) intron (NR_110042, intron 4 of 5) 14734 NR_110042 101927058 Hs.434238 NR_110042 ENSG00000257510 LINC02402 - long intergenic non-protein coding RNA 2402 ncRNA chr14-969 chr14 69501534 69501744 + 12.6 0.000 intron (NM_001161498, intron 4 of 12) intron (NM_001161498, intron 4 of 12) 16911 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr1-6035 chr1 71053718 71053928 + 12.6 0.000 intron (NR_038420, intron 2 of 2) intron (NR_038420, intron 2 of 2) -6007 NM_198714 5733 Hs.445000 NM_000957 ENSG00000050628 PTGER3 EP3|EP3-I|EP3-II|EP3-III|EP3-IV|EP3-VI|EP3e|PGE2-R prostaglandin E receptor 3 protein-coding chr9-2473 chr9 38066283 38066493 + 12.6 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 2839 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr5-2336 chr5 67799960 67800170 + 12.6 0.000 non-coding (NR_130779, exon 3 of 3) non-coding (NR_130779, exon 3 of 3) 6852 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA chr3-3754 chr3 5726965 5727175 + 12.6 0.000 Intergenic Intergenic -476815 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr4-1449 chr4 124713331 124713541 + 12.6 0.000 promoter-TSS (NM_020337) promoter-TSS (NM_020337) -704 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr13-1223 chr13 76225924 76226134 + 12.6 0.000 Intergenic Intergenic -290897 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr2-7332 chr2 241345269 241345479 + 12.6 0.000 intron (NM_001349311, intron 10 of 13) intron (NM_001349311, intron 10 of 13) -10911 NM_014808 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr11-2651 chr11 58905896 58906106 + 12.6 0.000 intron (NM_001354699, intron 1 of 7) intron (NM_001354699, intron 1 of 7) 603 NM_001354699 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr1-3987 chr1 156421645 156421855 + 12.6 0.000 promoter-TSS (NR_135267) promoter-TSS (NR_135267) 19 NM_001320454 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr7-2533 chr7 66442622 66442832 + 12.6 0.000 Intergenic L1MEc|LINE|L1 -42319 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr9-2374 chr9 121885770 121885980 + 12.6 0.000 intron (NM_001139442, intron 6 of 8) AluJo|SINE|Alu 143090 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr17-2296 chr17 40479920 40480130 + 12.6 0.000 intron (NM_032865, intron 9 of 12) intron (NM_032865, intron 9 of 12) 21598 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr12-3081 chr12 12671474 12671684 + 12.6 0.000 intron (NM_006143, intron 3 of 3) intron (NM_006143, intron 3 of 3) 24604 NM_006143 2842 Hs.657862 NM_006143 ENSG00000183150 GPR19 - G protein-coupled receptor 19 protein-coding chr1-2784 chr1 197356992 197357202 + 12.6 0.000 intron (NM_001193640, intron 3 of 9) intron (NM_001193640, intron 3 of 9) 88845 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr6-1656 chr6 149169803 149170013 + 12.6 0.000 Intergenic Intergenic -48016 NR_125861 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr1-3125 chr1 48817613 48817823 + 12.6 0.000 intron (NR_136623, intron 5 of 12) intron (NR_136623, intron 5 of 12) -40749 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr6-4222 chr6 4820704 4820914 + 12.6 0.000 intron (NM_001368127, intron 1 of 5) intron (NM_001368127, intron 1 of 5) -15289 NM_001143970 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr11-2947 chr11 73949602 73949812 + 12.6 0.000 promoter-TSS (NM_153614) promoter-TSS (NM_153614) -612 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr7-4667 chr7 37352222 37352432 + 12.6 0.000 intron (NM_001206480, intron 1 of 21) FLAM_C|SINE|Alu 1341 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr2-3544 chr2 12069536 12069746 + 12.6 0.000 intron (NR_110196, intron 2 of 5) L1MD1|LINE|L1 62525 NR_110196 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr9-2261 chr9 98412181 98412391 + 12.6 0.000 intron (NM_005458, intron 7 of 18) intron (NM_005458, intron 7 of 18) -156637 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr10-2636 chr10 89129978 89130188 + 12.6 0.000 Intergenic Intergenic -66672 NR_039827 100616192 NR_039827 ENSG00000265375 MIR4679-2 - microRNA 4679-2 ncRNA chr1-6997 chr1 168098634 168098844 + 12.6 0.000 intron (NM_001267614, intron 1 of 4) intron (NM_001267614, intron 1 of 4) 37697 NM_001267612 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr4-937 chr4 87033196 87033406 + 12.6 0.000 intron (NM_001313960, intron 1 of 17) intron (NM_001313960, intron 1 of 17) 26300 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr1-3585 chr1 8858238 8858448 + 12.6 0.000 Intergenic Intergenic 8247 NR_106786 102465436 NR_106786 ENSG00000274258 MIR6728 hsa-mir-6728 microRNA 6728 ncRNA chr16-1346 chr16 84431833 84432043 + 12.6 0.000 intron (NM_001291454, intron 8 of 23) intron (NM_001291454, intron 8 of 23) 25350 NM_001291454 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr22-420 chr22 19995549 19995759 + 12.6 0.000 intron (NM_001670, intron 2 of 19) intron (NM_001670, intron 2 of 19) 21169 NM_001670 421 Hs.713616 NM_001670 ENSG00000099889 ARVCF - ARVCF delta catenin family member protein-coding chr7-5901 chr7 96179254 96179464 + 12.6 0.000 intron (NM_001160210, intron 11 of 17) L3b|LINE|CR1 40397 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr6-3447 chr6 149331557 149331767 + 12.6 0.000 intron (NM_015093, intron 1 of 8) L1MC|LINE|L1 13362 NM_015093 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr12-4984 chr12 77939994 77940204 + 12.6 0.000 intron (NM_001024383, intron 1 of 39) intron (NM_001024383, intron 1 of 39) 109205 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr5-1050 chr5 65721278 65721488 + 12.6 0.000 promoter-TSS (NM_020726) promoter-TSS (NM_020726) 726 NM_019072 54557 Hs.482301 NM_019072 ENSG00000197860 SGTB SGT2 small glutamine rich tetratricopeptide repeat containing beta protein-coding chr21-1364 chr21 38263490 38263700 + 12.6 0.000 intron (NM_002243, intron 2 of 3) intron (NM_002243, intron 2 of 3) 6604 NM_170736 3772 Hs.411299 NM_002243 ENSG00000157551 KCNJ15 IRKK|KIR1.3|KIR4.2 potassium voltage-gated channel subfamily J member 15 protein-coding chr17-6976 chr17 48841804 48842014 + 12.6 0.000 intron (NM_005831, intron 2 of 12) intron (NM_005831, intron 2 of 12) 10874 NM_001261390 10241 Hs.514920 NM_005831 ENSG00000136436 CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 protein-coding chr17-4585 chr17 765222 765432 + 12.6 0.000 intron (NM_016080, intron 8 of 8) intron (NM_016080, intron 8 of 8) 12994 NR_024120 100131454 Hs.662289 NR_024120 ENSG00000231784 DBIL5P ELP2P diazepam binding inhibitor-like 5, pseudogene pseudo chr12-2584 chr12 116539297 116539507 + 12.6 0.000 Intergenic LTR86A2|LTR|ERVL 5967 NR_027346 100287569 Hs.441601 NM_207436 ENSG00000196668 LINC00173 NCRNA00173 long intergenic non-protein coding RNA 173 ncRNA chr15-1138 chr15 55435281 55435491 + 12.6 0.000 intron (NM_001033560, intron 7 of 8) MLT1K|LTR|ERVL-MaLR -26876 NM_001204450 9236 Hs.285051 NM_004748 ENSG00000260916 CCPG1 CPR8 cell cycle progression 1 protein-coding chr1-9051 chr1 13756741 13756951 + 12.6 0.000 intron (NM_001135610, intron 6 of 7) MIRb|SINE|MIR 7431 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr1-3975 chr1 154675622 154675832 + 12.6 0.000 Intergenic HERV9NC-int|LTR|ERV1 -47730 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr4-2009 chr4 1810172 1810382 + 12.6 0.000 Intergenic Intergenic 16965 NM_001163213 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr12-1685 chr12 108148291 108148501 + 12.6 0.000 intron (NM_001304447, intron 1 of 9) L2a|LINE|L2 16610 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr3-1572 chr3 49684776 49684986 + 12.6 0.000 TTS (NM_001640) TTS (NM_001640) 3882 NR_146060 4485 Hs.349110 NM_020998 ENSG00000173531 MST1 D3F15S2|DNF15S2|HGFL|MSP|NF15S2 macrophage stimulating 1 protein-coding chr9-1928 chr9 2094254 2094464 + 12.6 0.000 intron (NM_001289397, intron 19 of 32) intron (NM_001289397, intron 19 of 32) -63303 NM_001289398 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr7-5359 chr7 30702929 30703139 + 12.6 0.000 Intergenic Intergenic -2931 NM_001202475 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr14-2143 chr14 81662052 81662262 + 12.6 0.000 Intergenic Intergenic -39096 NR_110074 101928559 Hs.525499 NR_110074 ENSG00000258977 LINC01467 - long intergenic non-protein coding RNA 1467 ncRNA chr11-2167 chr11 118522920 118523130 + 12.6 0.000 3' UTR (NM_001197104, exon 36 of 36) 3' UTR (NM_001197104, exon 36 of 36) -4408 NM_001346096 143941 Hs.653449 NM_001080441 ENSG00000172425 TTC36 HBP21 tetratricopeptide repeat domain 36 protein-coding chr3-4325 chr3 175526812 175527022 + 12.6 0.000 intron (NM_207015, intron 9 of 13) intron (NM_207015, intron 9 of 13) 157377 NR_039952 100616395 NR_039952 ENSG00000264974 MIR4789 - microRNA 4789 ncRNA chr11-2332 chr11 72647570 72647780 + 12.6 0.000 intron (NM_002599, intron 1 of 30) intron (NM_002599, intron 1 of 30) -5215 NM_001243784 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr22-1071 chr22 21691828 21692038 + 12.6 0.000 intron (NM_148175, intron 15 of 20) intron (NM_148175, intron 15 of 20) 25921 NM_148175 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr17-1883 chr17 47655005 47655215 + 12.6 0.000 intron (NM_002265, intron 3 of 21) intron (NM_002265, intron 3 of 21) 4045 NM_001276453 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr8-2707 chr8 97440126 97440336 + 12.6 0.000 intron (NR_125390, intron 1 of 2) MER44B|DNA|TcMar-Tigger 6266 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr9-4306 chr9 122201440 122201650 + 12.6 0.000 Intergenic Intergenic 20195 NM_001242335 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr13-575 chr13 45194400 45194610 + 12.6 0.000 exon (NM_198404, exon 2 of 2) exon (NM_198404, exon 2 of 2) 6540 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr3-2575 chr3 114447660 114447870 + 12.6 0.000 intron (NM_001348805, intron 7 of 10) intron (NM_001348805, intron 7 of 10) -5828 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr5-1682 chr5 74167661 74167871 + 12.6 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger 140559 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr4-4620 chr4 79226828 79227038 + 12.6 0.000 intron (NR_038342, intron 4 of 5) L1PA5|LINE|L1 99128 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr12-1384 chr12 87127445 87127655 + 12.6 0.000 Intergenic Intergenic -203189 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr17-1431 chr17 4764330 4764540 + 12.6 0.000 Intergenic Intergenic -7451 NM_003963 9032 Hs.184194 NM_003963 ENSG00000142484 TM4SF5 - transmembrane 4 L six family member 5 protein-coding chr1-5119 chr1 151941545 151941755 + 12.6 0.000 Intergenic Intergenic -32139 NM_053055 117145 Hs.164070 NM_053055 ENSG00000159445 THEM4 CTMP thioesterase superfamily member 4 protein-coding chr11-3711 chr11 10690937 10691147 + 12.6 0.000 intron (NM_001100163, intron 1 of 20) intron (NM_001100163, intron 1 of 20) 2532 NM_001100167 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr6-1013 chr6 43725177 43725387 + 12.6 0.000 Intergenic Intergenic -37470 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr3-2111 chr3 49177805 49178015 + 12.6 0.000 exon (NM_001080528, exon 4 of 4) exon (NM_001080528, exon 4 of 4) 6312 NM_173546 200942 Hs.13781 NM_173546 ENSG00000185909 KLHDC8B CHL kelch domain containing 8B protein-coding chr1-4675 chr1 216865608 216865818 + 12.6 0.000 intron (NM_001243507, intron 2 of 7) intron (NM_001243507, intron 2 of 7) -60328 NM_001243514 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr4-3195 chr4 10703286 10703496 + 12.6 0.000 Intergenic Intergenic -18623 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr6-2540 chr6 17360997 17361207 + 12.6 0.000 Intergenic MER63A|DNA|hAT-Blackjack -32403 NM_001363534 10486 Hs.132902 NM_006366 ENSG00000112186 CAP2 - cyclase associated actin cytoskeleton regulatory protein 2 protein-coding chr15-1131 chr15 42832673 42832883 + 12.6 0.000 intron (NM_173500, intron 4 of 14) Tigger7|DNA|TcMar-Tigger 88000 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr3-1196 chr3 16124865 16125075 + 12.6 0.000 Intergenic Intergenic -49710 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr11-1705 chr11 71792651 71792861 + 12.6 0.000 intron (NM_001099653, intron 3 of 4) intron (NM_001099653, intron 3 of 4) 5242 NM_018172 55199 Hs.567527 NM_018172 ENSG00000158483 FAM86C1 FAM86C family with sequence similarity 86 member C1 protein-coding chr2-3072 chr2 108252520 108252730 + 12.6 0.000 intron (NM_001008743, intron 3 of 7) intron (NM_001008743, intron 3 of 7) 12657 NM_001320878 442038 NM_001008743 ENSG00000196228 SULT1C3 ST1C3 sulfotransferase family 1C member 3 protein-coding chr11-1073 chr11 77091162 77091372 + 12.6 0.000 intron (NM_004055, intron 2 of 12) intron (NM_004055, intron 2 of 12) -11573 NM_006189 4975 Hs.673853 NM_006189 ENSG00000254550 OMP - olfactory marker protein protein-coding chr2-4286 chr2 232517020 232517230 + 12.6 0.000 Intergenic Intergenic -3338 NM_001195129 646960 Hs.570310 NM_001195129 ENSG00000237412 PRSS56 MCOP6 serine protease 56 protein-coding chr1-9469 chr1 36123225 36123435 + 12.6 0.000 intron (NM_005202, intron 1 of 3) intron (NM_005202, intron 1 of 3) 1892 NM_005202 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr17-2793 chr17 6346329 6346539 + 12.6 0.000 Intergenic Intergenic 88687 NM_001285399 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr10-1595 chr10 32378720 32378930 + 12.6 0.000 promoter-TSS (NM_001282391) promoter-TSS (NM_001282391) -56 NM_001282391 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr3-2590 chr3 134461120 134461330 + 12.6 0.000 Intergenic Intergenic 23398 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA chr3-2283 chr3 79368435 79368645 + 12.6 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) -43187 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr21-707 chr21 32112129 32112339 + 12.6 0.000 Intergenic MIRb|SINE|MIR -25939 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr19-3918 chr19 46263021 46263231 + 12.6 0.000 Intergenic Intergenic 33384 NM_198541 374918 Hs.546554 NM_198541 ENSG00000188293 IGFL1 APRG644|UNQ644 IGF like family member 1 protein-coding chr13-2292 chr13 30049872 30050082 + 12.6 0.000 Intergenic L2b|LINE|L2 58898 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr6-1337 chr6 34745263 34745473 + 12.6 0.000 Intergenic Intergenic -11726 NR_029472 6631 Hs.1063 NM_003093 ENSG00000124562 SNRPC U1C|Yhc1 small nuclear ribonucleoprotein polypeptide C protein-coding chr7-2277 chr7 16129515 16129725 + 12.6 0.000 intron (NM_001101426, intron 9 of 9) intron (NM_001101426, intron 9 of 9) -80866 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chrX-1338 chrX 134849584 134849794 + 12.6 0.000 intron (NR_158606, intron 10 of 11) intron (NR_158606, intron 10 of 11) 42452 NM_001170783 159091 Hs.269127 NM_138819 ENSG00000156500 FAM122C - family with sequence similarity 122C protein-coding chr11-1414 chr11 43987709 43987919 + 12.6 0.000 Intergenic Intergenic 45177 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr5-1166 chr5 7392407 7392617 + 12.6 0.000 Intergenic MER45A|DNA|hAT-Tip100 -3626 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chr8-1205 chr8 81235255 81235465 + 12.6 0.000 Intergenic Intergenic -45176 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding chr5-3817 chr5 96209954 96210164 + 12.6 0.000 intron (NR_130776, intron 1 of 4) L1PA15|LINE|L1 130921 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr8-1714 chr8 128038499 128038709 + 12.6 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) -10548 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr21-493 chr21 16125349 16125559 + 12.6 0.000 intron (NR_111005, intron 1 of 6) intron (NR_111005, intron 1 of 6) 54340 NR_111005 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr13-2686 chr13 88461284 88461494 + 12.6 0.000 Intergenic MER67D|LTR|ERV1 -79440 NR_047021 100874168 Hs.126406 NR_047021 LINC00433 - long intergenic non-protein coding RNA 433 ncRNA chr2-3119 chr2 160214561 160214771 + 12.6 0.000 Intergenic Intergenic -14353 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr3-3557 chr3 49449205 49449415 + 12.6 0.000 Intergenic Intergenic -19393 NM_001177643 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr15-2127 chr15 72305483 72305693 + 12.6 0.000 intron (NM_052840, intron 2 of 12) L2|LINE|L2 727 NM_001172685 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr15-920 chr15 66724925 66725135 + 12.6 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 22794 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr20-1283 chr20 48919752 48919962 + 12.6 0.000 Intergenic Intergenic -1854 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr3-3990 chr3 57048332 57048542 + 12.6 0.000 intron (NM_001128615, intron 1 of 12) intron (NM_001128615, intron 1 of 12) -12227 NM_181727 353324 Hs.129794 NM_181727 ENSG00000186451 SPATA12 SRG5 spermatogenesis associated 12 protein-coding chr8-818 chr8 140967226 140967436 + 12.6 0.000 intron (NM_001352719, intron 1 of 32) intron (NM_001352719, intron 1 of 32) 33673 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr8-1005 chr8 133583339 133583549 + 12.6 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -11557 NM_003033 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr17-3756 chr17 30808978 30809188 + 12.6 0.000 intron (NM_015986, intron 1 of 7) intron (NM_015986, intron 1 of 7) 15609 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr6-1024 chr6 116411269 116411479 + 12.6 0.000 intron (NM_001322937, intron 3 of 6) intron (NM_001322937, intron 3 of 6) -39655 NR_148944 100287467 Hs.458358 NR_148944 LOC100287467 - uncharacterized LOC100287467 ncRNA chr9-1910 chr9 134597410 134597620 + 12.6 0.000 Intergenic Intergenic -44290 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr18-313 chr18 62524743 62524953 + 12.6 0.000 intron (NR_126534, intron 1 of 14) CpG 1823 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr6-970 chr6 83512021 83512231 + 12.6 0.000 promoter-TSS (NM_001170423) promoter-TSS (NM_001170423) -408 NM_153362 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr2-6013 chr2 88090771 88090981 + 12.5 0.000 intron (NM_001330364, intron 3 of 8) intron (NM_001330364, intron 3 of 8) -8277 NR_039940 100616447 NR_039940 ENSG00000265003 MIR4780 - microRNA 4780 ncRNA chr2-2399 chr2 21659009 21659219 + 12.5 0.000 Intergenic Intergenic 51538 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr14-1453 chr14 100907852 100908062 + 12.5 0.000 intron (NR_146000, intron 7 of 50) intron (NR_146000, intron 7 of 50) -3182 NR_029863 442915 NR_029863 ENSG00000199005 MIR370 MIRN370|hsa-mir-370|mir-370 microRNA 370 ncRNA chr15-430 chr15 78873409 78873619 + 12.5 0.000 intron (NM_001265604, intron 1 of 11) CpG 525 NM_001265604 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chr6-1612 chr6 52540595 52540805 + 12.5 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 36360 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr17-1716 chr17 60851380 60851590 + 12.5 0.000 intron (NM_001330413, intron 7 of 25) intron (NM_001330413, intron 7 of 25) 173634 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr2-2881 chr2 200618731 200618941 + 12.5 0.000 intron (NM_001159, intron 16 of 34) intron (NM_001159, intron 16 of 34) 32822 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr5-5758 chr5 172561282 172561492 + 12.5 0.000 Intergenic L1ME3G|LINE|L1 -2373 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr11-1978 chr11 17674083 17674293 + 12.5 0.000 Intergenic L2c|LINE|L2 22751 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr9-3687 chr9 100441991 100442201 + 12.5 0.000 exon (NM_080655, exon 2 of 3) exon (NM_080655, exon 2 of 3) 190 NM_001198812 100526694 Hs.598100 NM_001198812 MSANTD3-TMEFF1 C9orf2|C9orf3-TMEFF1|C9orf30-TMEFF1|H7365|TMEFF1|TR-1 MSANTD3-TMEFF1 readthrough protein-coding chr10-2772 chr10 124987001 124987211 + 12.5 0.000 3' UTR (NM_001321012, exon 11 of 11) 3' UTR (NM_001321012, exon 11 of 11) 18912 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr9-2757 chr9 104858395 104858605 + 12.5 0.000 intron (NM_005502, intron 7 of 49) intron (NM_005502, intron 7 of 49) 69655 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr10-1065 chr10 113627190 113627400 + 12.5 0.000 intron (NM_001322945, intron 20 of 40) intron (NM_001322945, intron 20 of 40) 36746 NM_198060 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr12-2504 chr12 81596687 81596897 + 12.5 0.000 intron (NM_001220474, intron 2 of 30) intron (NM_001220474, intron 2 of 30) 1579 NM_001220477 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr20-472 chr20 63574293 63574503 + 12.5 0.000 promoter-TSS (NM_001037335) promoter-TSS (NM_001037335) -159 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr12-1759 chr12 79420440 79420650 + 12.5 0.000 intron (NM_001291901, intron 8 of 9) intron (NM_001291901, intron 8 of 9) 1288 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr9-3513 chr9 30514778 30514988 + 12.5 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -106429 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr11-5495 chr11 80177580 80177790 + 12.5 0.000 Intergenic THE1C|LTR|ERVL-MaLR 585118 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr1-9279 chr1 25612348 25612558 + 12.5 0.000 Intergenic L2b|LINE|L2 -5015 NM_001289010 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr3-1384 chr3 66618086 66618296 + 12.5 0.000 Intergenic Intergenic -117770 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr17-2035 chr17 39551814 39552024 + 12.5 0.000 Intergenic Intergenic 56001 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr3-2302 chr3 113912986 113913196 + 12.5 0.000 intron (NM_001172105, intron 4 of 12) intron (NM_001172105, intron 4 of 12) 15591 NM_001172105 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr9-1901 chr9 127904728 127904938 + 12.5 0.000 intron (NR_104629, intron 1 of 5) intron (NR_104629, intron 1 of 5) 515 NM_001287002 30815 Hs.109672 NM_013443 ENSG00000160408 ST6GALNAC6 SIAT7-F|SIAT7F|ST6GALNACVI ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding chr8-6398 chr8 55670029 55670239 + 12.5 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 103244 NM_001286661 137695 Hs.420076 NM_152417 ENSG00000167904 TMEM68 - transmembrane protein 68 protein-coding chr3-2561 chr3 81545424 81545634 + 12.5 0.000 intron (NM_000158, intron 12 of 15) intron (NM_000158, intron 12 of 15) 216116 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr2-6181 chr2 2693070 2693280 + 12.5 0.000 Intergenic Intergenic -361900 NM_001329851 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr2-6307 chr2 65751509 65751719 + 12.5 0.000 Intergenic Charlie15a|DNA|hAT-Charlie -319015 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr17-5442 chr17 39227920 39228130 + 12.5 0.000 Intergenic Intergenic -2080 NM_198993 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr8-1296 chr8 73090188 73090398 + 12.5 0.000 intron (NM_153225, intron 1 of 4) intron (NM_153225, intron 1 of 4) 2879 NM_153225 157869 Hs.439040 NM_153225 ENSG00000164764 SBSPON C8orf84|RPESP somatomedin B and thrombospondin type 1 domain containing protein-coding chr2-6998 chr2 140854190 140854400 + 12.5 0.000 intron (NM_018557, intron 27 of 90) intron (NM_018557, intron 27 of 90) -267610 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr14-1513 chr14 53044563 53044773 + 12.5 0.000 3' UTR (NM_001160147, exon 13 of 13) 3' UTR (NM_001160147, exon 13 of 13) -93571 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr18-1476 chr18 60228376 60228586 + 12.5 0.000 Intergenic L2c|LINE|L2 144294 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr6-1769 chr6 77124661 77124871 + 12.5 0.000 Intergenic L1PA16|LINE|L1 339256 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr6-923 chr6 12957428 12957638 + 12.5 0.000 promoter-TSS (NM_001322312) promoter-TSS (NM_001322312) 47 NM_001322313 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr2-7850 chr2 48512762 48512972 + 12.5 0.000 intron (NR_024188, intron 21 of 21) intron (NR_024188, intron 21 of 21) -17058 NM_001198593 286749 Hs.732016 NM_172311 ENSG00000068781 STON1-GTF2A1L ALF|GTF2A1L|GTF2A1LF|SALF STON1-GTF2A1L readthrough protein-coding chr5-1350 chr5 14593440 14593650 + 12.5 0.000 intron (NM_019018, intron 1 of 7) intron (NM_019018, intron 1 of 7) 11753 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 OTULINL FAM105A|NET20 OTU deubiquitinase with linear linkage specificity like protein-coding chr5-2409 chr5 109567498 109567708 + 12.5 0.000 Intergenic Intergenic -121763 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr18-501 chr18 23574196 23574406 + 12.5 0.000 intron (NM_000271, intron 1 of 24) intron (NM_000271, intron 1 of 24) 12205 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC|POGZ|SLC65A1 NPC intracellular cholesterol transporter 1 protein-coding chr4-1003 chr4 950500 950710 + 12.5 0.000 intron (NM_001297424, intron 2 of 8) intron (NM_001297424, intron 2 of 8) 18145 NM_001297424 84286 Hs.478936 NM_032326 ENSG00000127419 TMEM175 hTMEM175 transmembrane protein 175 protein-coding chr20-866 chr20 4119589 4119799 + 12.5 0.000 Intergenic L2|LINE|L2 -29085 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr11-3085 chr11 19868564 19868774 + 12.5 0.000 intron (NM_182964, intron 3 of 37) intron (NM_182964, intron 3 of 37) -108586 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr18-665 chr18 49242002 49242212 + 12.5 0.000 intron (NM_001353214, intron 13 of 17) intron (NM_001353214, intron 13 of 17) -192339 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr9-3565 chr9 70802303 70802513 + 12.5 0.000 intron (NM_001366143, intron 6 of 25) MER58A|DNA|hAT-Charlie 7676 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr17-3580 chr17 80470842 80471052 + 12.5 0.000 exon (NM_002522, exon 5 of 5) exon (NM_002522, exon 5 of 5) 5660 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr19-3126 chr19 16684119 16684329 + 12.5 0.000 intron (NM_024074, intron 4 of 5) AluJo|SINE|Alu 23085 NM_024074 79041 Hs.436068 NM_024074 ENSG00000072954 TMEM38A TRIC-A|TRICA transmembrane protein 38A protein-coding chr2-1941 chr2 219350714 219350924 + 12.5 0.000 Intergenic Intergenic -17642 NM_001007089 389075 Hs.290551 NM_001007089 ENSG00000182698 RESP18 - regulated endocrine specific protein 18 protein-coding chr3-3720 chr3 182969350 182969560 + 12.5 0.000 intron (NM_001308101, intron 1 of 6) intron (NM_001308101, intron 1 of 6) 11083 NM_020640 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr2-7870 chr2 52467086 52467296 + 12.5 0.000 Intergenic Intergenic 96543 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr1-4089 chr1 225700408 225700618 + 12.5 0.000 Intergenic Intergenic -47390 NM_001008493 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr20-1871 chr20 38897714 38897924 + 12.5 0.000 intron (NM_015568, intron 4 of 10) L1MB3|LINE|L1 -28598 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr4-3377 chr4 14868750 14868960 + 12.5 0.000 intron (NR_126435, intron 1 of 6) MER103C|DNA|hAT-Charlie 19314 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr11-3381 chr11 128251223 128251433 + 12.5 0.000 Intergenic Intergenic 42562 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr4-5320 chr4 181635782 181635992 + 12.5 0.000 Intergenic Intergenic 194086 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr11-6046 chr11 29968425 29968635 + 12.5 0.000 Intergenic AluY|SINE|Alu 13863 NR_132652 106456574 Hs.128812 NR_132652 ENSG00000261340 LINC01616 n341006 long intergenic non-protein coding RNA 1616 ncRNA chr19-2208 chr19 38023589 38023799 + 12.5 0.000 intron (NM_015073, intron 1 of 21) intron (NM_015073, intron 1 of 21) 116486 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr8-2640 chr8 69523777 69523987 + 12.5 0.000 intron (NR_156414, intron 2 of 20) L2a|LINE|L2 31035 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr11-7845 chr11 115752655 115752865 + 12.5 0.000 Intergenic Intergenic 7440 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr2-1948 chr2 228731624 228731834 + 12.5 0.000 Intergenic Intergenic -120334 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr3-1860 chr3 115788867 115789077 + 12.5 0.000 Intergenic Intergenic 116154 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr21-312 chr21 46667752 46667962 + 12.5 0.000 Intergenic CpG 32183 NM_206962 3275 Hs.154163 NM_001535 ENSG00000160310 PRMT2 HRMT1L1 protein arginine methyltransferase 2 protein-coding chr20-2455 chr20 31481455 31481665 + 12.5 0.000 intron (NM_014012, intron 3 of 4) L2c|LINE|L2 -4218 NR_024358 140875 Hs.283478 NR_024358 ENSG00000233354 LINC00028 C20orf93|NCRNA00028|dJ1093G12.6 long intergenic non-protein coding RNA 28 ncRNA chr17-1629 chr17 2416267 2416477 + 12.5 0.000 promoter-TSS (NR_028335) promoter-TSS (NR_028335) -936 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr7-2793 chr7 80087511 80087721 + 12.5 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -47215 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chrX-1841 chrX 105760366 105760576 + 12.5 0.000 intron (NM_017416, intron 10 of 10) intron (NM_017416, intron 10 of 10) -62068 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr15-1682 chr15 55498243 55498453 + 12.5 0.000 non-coding (NR_037923, exon 1 of 16) non-coding (NR_037923, exon 1 of 16) 236 NR_037923 100533483 Hs.285051 NR_037923 ENSG00000261771 DNAAF4-CCPG1 DYX1C1-CCPG1 DNAAF4-CCPG1 readthrough (NMD candidate) ncRNA chr1-5064 chr1 97901262 97901472 + 12.5 0.000 intron (NM_000110, intron 1 of 22) intron (NM_000110, intron 1 of 22) 19692 NM_001160301 1806 Hs.335034 NM_000110 ENSG00000188641 DPYD DHP|DHPDHASE|DPD dihydropyrimidine dehydrogenase protein-coding chr19-2094 chr19 51070625 51070835 + 12.5 0.000 Intergenic MER77|LTR|ERVL -5638 NM_001348178 26085 Hs.165296 NM_015596 ENSG00000167759 KLK13 KLK-L4|KLKL4 kallikrein related peptidase 13 protein-coding chr13-2597 chr13 73674639 73674849 + 12.5 0.000 Intergenic Intergenic 110500 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr11-5286 chr11 38256262 38256472 + 12.5 0.000 Intergenic Intergenic 317766 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr7-2173 chr7 73842303 73842513 + 12.5 0.000 intron (NM_152559, intron 1 of 5) CpG 108 NM_152559 155368 Hs.647042 NM_152559 ENSG00000165171 METTL27 WBSCR27 methyltransferase like 27 protein-coding chr1-6235 chr1 224224158 224224368 + 12.5 0.000 intron (NR_110668, intron 2 of 2) intron (NR_110668, intron 2 of 2) 4650 NR_110668 101927164 Hs.710128 NR_110668 ENSG00000237101 LOC101927164 - uncharacterized LOC101927164 ncRNA chr17-2453 chr17 39553844 39554054 + 12.5 0.000 Intergenic Intergenic 53971 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr2-2331 chr2 158395337 158395547 + 12.5 0.000 intron (NM_138803, intron 1 of 13) intron (NM_138803, intron 1 of 13) 61311 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr1-2379 chr1 110117043 110117253 + 12.5 0.000 Intergenic Intergenic 4705 NM_203412 164153 Hs.374027 NM_203412 ENSG00000186150 UBL4B - ubiquitin like 4B protein-coding chr11-4634 chr11 20900511 20900721 + 12.5 0.000 intron (NM_201551, intron 5 of 18) L1ME3C|LINE|L1 231030 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr2-2734 chr2 145593958 145594168 + 12.5 0.000 Intergenic Intergenic 926096 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr3-1409 chr3 149657845 149658055 + 12.5 0.000 promoter-TSS (NM_015472) promoter-TSS (NM_015472) 75 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr17-1637 chr17 17767127 17767337 + 12.5 0.000 promoter-TSS (NR_130894) promoter-TSS (NR_130894) -930 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr13-2283 chr13 28839633 28839843 + 12.5 0.000 intron (NM_001366651, intron 1 of 14) intron (NM_001366651, intron 1 of 14) 19399 NM_001366651 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr11-6813 chr11 93240573 93240783 + 12.5 0.000 Intergenic L1MA1|LINE|L1 -42687 NM_152313 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr5-5216 chr5 115165540 115165750 + 12.5 0.000 intron (NM_018700, intron 1 of 9) MER52A|LTR|ERV1 4263 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr13-1193 chr13 48568191 48568401 + 12.5 0.000 Intergenic MIRc|SINE|MIR 12605 NR_051983 100129597 Hs.175225 NR_051983 ENSG00000233610 LINC00462 - long intergenic non-protein coding RNA 462 ncRNA chr7-1812 chr7 102125282 102125492 + 12.5 0.000 intron (NM_001913, intron 8 of 22) intron (NM_001913, intron 8 of 22) -159754 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr8-1366 chr8 123487125 123487335 + 12.5 0.000 Intergenic Intergenic 44913 NM_148177 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr4-1285 chr4 76998706 76998916 + 12.5 0.000 intron (NM_001306147, intron 4 of 11) MLT1K|LTR|ERVL-MaLR 49059 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr4-2804 chr4 33086577 33086787 + 12.5 0.000 Intergenic Intergenic 735644 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr3-3647 chr3 124885599 124885809 + 12.5 0.000 intron (NM_001354766, intron 1 of 13) Charlie18a|DNA|hAT-Charlie 1661 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr6-1595 chr6 36917564 36917774 + 12.5 0.000 intron (NM_152734, intron 6 of 7) intron (NM_152734, intron 6 of 7) -30594 NM_001199159 221476 Hs.25391 NM_153370 ENSG00000164530 PI16 CD364|CRISP9|MSMBBP|PSPBP peptidase inhibitor 16 protein-coding chr19-1626 chr19 52237955 52238165 + 12.5 0.000 Intergenic FRAM|SINE|Alu 16040 NR_106859 102466984 NR_106859 ENSG00000274380 MIR6801 hsa-mir-6801 microRNA 6801 ncRNA chr2-3506 chr2 220001696 220001906 + 12.5 0.000 Intergenic Intergenic -95236 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr16-1833 chr16 59079628 59079838 + 12.5 0.000 Intergenic L1M5|LINE|L1 -345417 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr6-3052 chr6 63975949 63976159 + 12.5 0.000 intron (NM_001292009, intron 35 of 43) Tigger3c|DNA|TcMar-Tigger 169218 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr11-4325 chr11 70216369 70216579 + 12.5 0.000 Intergenic HERVH-int|LTR|ERV1 13311 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr5-2681 chr5 53037675 53037885 + 12.5 0.000 intron (NR_073106, intron 2 of 29) intron (NR_073106, intron 2 of 29) 48428 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr18-587 chr18 26335860 26336070 + 12.5 0.000 intron (NM_005640, intron 13 of 14) intron (NM_005640, intron 13 of 14) -87030 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr7-1207 chr7 75054747 75054957 + 12.5 0.000 intron (NM_148842, intron 9 of 10) intron (NM_148842, intron 9 of 10) 18950 NM_001363447 81554 Hs.529623 NM_030798 ENSG00000274523 RCC1L WBSCR16 RCC1 like protein-coding chr19-1284 chr19 50050362 50050572 + 12.5 0.000 promoter-TSS (NR_027257) promoter-TSS (NR_027257) -122 NR_027257 400710 Hs.628968 NR_027257 ENSG00000204666 LOC400710 - uncharacterized LOC400710 ncRNA chr22-989 chr22 38469134 38469344 + 12.5 0.000 intron (NM_016657, intron 1 of 3) intron (NM_016657, intron 1 of 3) 1143 NM_006855 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr7-1735 chr7 25835257 25835467 + 12.5 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -45243 NR_157808 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr5-2472 chr5 139385742 139385952 + 12.5 0.000 Intergenic LTR8|LTR|ERV1 -2497 NM_152685 9963 Hs.643467 NM_005847 ENSG00000170482 SLC23A1 SLC23A2|SVCT1|YSPL3 solute carrier family 23 member 1 protein-coding chr7-1423 chr7 36291943 36292153 + 12.5 0.000 intron (NM_030636, intron 6 of 7) intron (NM_030636, intron 6 of 7) 75192 NM_001199707 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr19-3966 chr19 866389 866599 + 12.5 0.000 Intergenic Intergenic 6830 NM_001928 1675 Hs.155597 NM_001928 ENSG00000197766 CFD ADIPSIN|ADN|DF|PFD complement factor D protein-coding chr4-3769 chr4 93432753 93432963 + 12.5 0.000 intron (NM_001286838, intron 9 of 14) AluJr|SINE|Alu -395895 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr15-3241 chr15 74824070 74824280 + 12.5 0.000 intron (NM_021819, intron 12 of 13) intron (NM_021819, intron 12 of 13) -2452 NM_001030005 594855 Hs.187694 NM_001030005 ENSG00000213578 CPLX3 CPX-III|CPXIII|Nbla11589 complexin 3 protein-coding chr16-2376 chr16 66058381 66058591 + 12.5 0.000 Intergenic MER121|DNA|hAT? -308205 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr14-1587 chr14 89276340 89276550 + 12.5 0.000 intron (NM_001085471, intron 4 of 6) intron (NM_001085471, intron 4 of 6) 140788 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr20-1386 chr20 63811611 63811821 + 12.5 0.000 intron (NR_110081, intron 1 of 2) intron (NR_110081, intron 1 of 2) 3640 NR_110081 101928604 Hs.676054 NR_110081 ZBTB46-AS1 - ZBTB46 antisense RNA 1 ncRNA chr3-6471 chr3 108614858 108615068 + 12.5 0.000 intron (NM_014648, intron 4 of 32) LTR16C|LTR|ERVL 25241 NM_014648 9666 Hs.409210 NM_014648 ENSG00000198919 DZIP3 PPP1R66|UURF2|hRUL138 DAZ interacting zinc finger protein 3 protein-coding chr10-6388 chr10 3323999 3324209 + 12.5 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 5409 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr19-2096 chr19 55474831 55475041 + 12.5 0.000 Intergenic Intergenic -1681 NM_033113 89887 Hs.525209 NM_033113 ENSG00000197483 ZNF628 ZEC|Zfp628 zinc finger protein 628 protein-coding chr15-1088 chr15 52094073 52094283 + 12.5 0.000 Intergenic Intergenic 18597 NM_001306168 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr13-789 chr13 76293382 76293592 + 12.5 0.000 Intergenic Intergenic -358355 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr17-3291 chr17 48125842 48126052 + 12.5 0.000 Intergenic Intergenic 18362 NM_013323 29916 Hs.15827 NM_013323 ENSG00000002919 SNX11 - sorting nexin 11 protein-coding chr6-4944 chr6 101512756 101512966 + 12.5 0.000 intron (NM_001166247, intron 1 of 16) Charlie7|DNA|hAT-Charlie 113876 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr17-4726 chr17 34131704 34131914 + 12.5 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 24997 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chrX-2830 chrX 136984793 136985003 + 12.5 0.000 Intergenic Intergenic 46776 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr1-5496 chr1 156022814 156023024 + 12.5 0.000 Intergenic AluSc5|SINE|Alu -1968 NM_003145 6746 Hs.74564 NM_003145 ENSG00000163479 SSR2 HSD25|TLAP|TRAP-BETA|TRAPB signal sequence receptor subunit 2 protein-coding chr20-1128 chr20 34242751 34242961 + 12.5 0.000 Intergenic Intergenic -17509 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr12-4798 chr12 54678492 54678702 + 12.5 0.000 Intergenic Intergenic -30232 NM_053283 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr1-9935 chr1 76728455 76728665 + 12.5 0.000 Intergenic L2a|LINE|L2 50707 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr11-6343 chr11 63246907 63247117 + 12.5 0.000 Intergenic Intergenic -17360 NM_199352 387601 Hs.332119 NM_199352 ENSG00000196600 SLC22A25 HIMTP|UST6 solute carrier family 22 member 25 protein-coding chr2-2495 chr2 152189969 152190179 + 12.5 0.000 Intergenic Intergenic -14311 NM_005843 10254 Hs.17200 NM_005843 ENSG00000115145 STAM2 Hbp|STAM2A|STAM2B signal transducing adaptor molecule 2 protein-coding chr11-1638 chr11 84902254 84902464 + 12.5 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) 21062 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-2653 chr9 35000915 35001125 + 12.5 0.000 Intergenic Intergenic 10730 NM_001135005 25822 Hs.237506 NM_012266 ENSG00000137094 DNAJB5 Hsc40 DnaJ heat shock protein family (Hsp40) member B5 protein-coding chr11-5996 chr11 21127734 21127944 + 12.5 0.000 intron (NM_201551, intron 13 of 18) intron (NM_201551, intron 13 of 18) 458253 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chrX-270 chrX 119236041 119236251 + 12.5 0.000 promoter-TSS (NM_006667) promoter-TSS (NM_006667) -99 NM_001282621 10857 Hs.90061 NM_006667 ENSG00000101856 PGRMC1 Dap1|HPR6.6|IZA|MPR progesterone receptor membrane component 1 protein-coding chr18-1248 chr18 52904088 52904298 + 12.5 0.000 intron (NM_005215, intron 2 of 28) intron (NM_005215, intron 2 of 28) -332908 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr22-941 chr22 46828661 46828871 + 12.5 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 54839 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr15-3061 chr15 61354954 61355164 + 12.5 0.000 Intergenic Intergenic -125757 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr6-1932 chr6 53315274 53315484 + 12.5 0.000 intron (NM_001242830, intron 1 of 6) MLT1A|LTR|ERVL-MaLR 22238 NR_046241 647190 Hs.520189 NR_046241 RPS16P5 RPS16_3_702 ribosomal protein S16 pseudogene 5 pseudo chr17-1499 chr17 29574251 29574461 + 12.5 0.000 3' UTR (NM_001085454, exon 21 of 21) 3' UTR (NM_001085454, exon 21 of 21) 5655 NM_001346079 90313 Hs.514050 NM_138349 ENSG00000167543 TP53I13 DSCP1 tumor protein p53 inducible protein 13 protein-coding chr6-4420 chr6 28212556 28212766 + 12.5 0.000 Intergenic Intergenic 6268 NR_002936 222699 Hs.161441 NR_002936 TOB2P1 TOB2P|TOB4p|p373c6.3 transducer of ERBB2, 2 pseudogene 1 pseudo chr2-5625 chr2 189130053 189130263 + 12.5 0.000 intron (NM_000393, intron 1 of 53) intron (NM_000393, intron 1 of 53) 2953 NR_036076 100422908 NR_036076 ENSG00000264725 MIR3129 mir-3129 microRNA 3129 ncRNA chr5-3824 chr5 100691644 100691854 + 12.5 0.000 Intergenic Intergenic 124816 NR_031686 100302288 NR_031686 ENSG00000221263 MIR548P MIRN548P|hsa-mir-548p microRNA 548p ncRNA chr1-1258 chr1 959271 959481 + 12.5 0.000 promoter-TSS (NM_015658) promoter-TSS (NM_015658) -120 NM_015658 26155 Hs.405987 NM_015658 ENSG00000188976 NOC2L NET15|NET7|NIR|PPP1R112 NOC2 like nucleolar associated transcriptional repressor protein-coding chr7-2574 chr7 127865577 127865787 + 12.5 0.000 intron (NM_014390, intron 12 of 23) AluJo|SINE|Alu -131827 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr1-6704 chr1 55015833 55016043 + 12.5 0.000 3' UTR (NM_057176, exon 4 of 4) 3' UTR (NM_057176, exon 4 of 4) 17005 NM_057176 7809 Hs.151291 NM_057176 ENSG00000162399 BSND BART|DFNB73 barttin CLCNK type accessory beta subunit protein-coding chr8-1488 chr8 41639846 41640056 + 12.5 0.000 Intergenic Intergenic 7408 NM_152568 157848 NM_152568 ENSG00000165066 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding chr2-2102 chr2 240991460 240991670 + 12.5 0.000 intron (NM_001351305, intron 31 of 31) intron (NM_001351305, intron 31 of 31) -7053 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr7-3088 chr7 3304426 3304636 + 12.5 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 3279 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr11-4380 chr11 75851279 75851489 + 12.5 0.000 intron (NM_003369, intron 1 of 14) intron (NM_003369, intron 1 of 14) 36174 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr13-1683 chr13 76889978 76890188 + 12.5 0.000 Intergenic MER44C|DNA|TcMar-Tigger -3678 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr7-4364 chr7 66326737 66326947 + 12.5 0.000 intron (NM_003596, intron 3 of 5) intron (NM_003596, intron 3 of 5) 73566 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr13-654 chr13 42814978 42815188 + 12.5 0.000 Intergenic Intergenic -2521 NR_125747 103689845 Hs.422131 NR_125747 ENSG00000271216 LINC01050 - long intergenic non-protein coding RNA 1050 ncRNA chr17-4146 chr17 82388055 82388265 + 12.5 0.000 Intergenic Intergenic 13883 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr10-7188 chr10 110076945 110077155 + 12.5 0.000 intron (NM_001121, intron 1 of 13) intron (NM_001121, intron 1 of 13) -68669 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr17-4690 chr17 28686222 28686432 + 12.5 0.000 intron (NM_003170, intron 19 of 36) intron (NM_003170, intron 19 of 36) 23777 NM_001366303 147011 Hs.207471 NM_152465 ENSG00000167525 PROCA1 - protein interacting with cyclin A1 protein-coding chr22-2176 chr22 44832522 44832732 + 12.5 0.000 intron (NM_181335, intron 7 of 11) L1M4|LINE|L1 80069 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr21-273 chr21 41141169 41141379 + 12.5 0.000 TTS (NR_024100) TTS (NR_024100) 6790 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr8-981 chr8 118415726 118415936 + 12.5 0.000 intron (NM_001349811, intron 3 of 4) intron (NM_001349811, intron 3 of 4) -205170 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr16-2160 chr16 57643320 57643530 + 12.5 0.000 intron (NM_001370454, intron 2 of 13) intron (NM_001370454, intron 2 of 13) 3933 NM_001145774 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr9-1985 chr9 121258124 121258334 + 12.5 0.000 intron (NM_001353054, intron 7 of 25) AluSz|SINE|Alu -9933 NM_001353059 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr12-3794 chr12 56628470 56628680 + 12.5 0.000 intron (NM_013449, intron 1 of 28) intron (NM_013449, intron 1 of 28) 1751 NM_001300905 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr20-1720 chr20 40197742 40197952 + 12.5 0.000 Intergenic Intergenic 193386 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr7-3431 chr7 156340182 156340392 + 12.5 0.000 Intergenic Intergenic 105301 NR_038232 285889 Hs.407095 NR_038232 ENSG00000182648 LOC285889 - uncharacterized LOC285889 ncRNA chr5-6009 chr5 145938192 145938402 + 12.5 0.000 exon (NM_152550, exon 2 of 10) exon (NM_152550, exon 2 of 10) 1719 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr13-805 chr13 113764275 113764485 + 12.5 0.000 intron (NM_182614, intron 1 of 8) intron (NM_182614, intron 1 of 8) 5137 NM_001348663 348013 Hs.280805 NM_182614 ENSG00000184497 TMEM255B FAM70B transmembrane protein 255B protein-coding chr1-10517 chr1 167822011 167822221 + 12.5 0.000 exon (NM_001167749, exon 27 of 30) exon (NM_001167749, exon 27 of 30) 92018 NM_018417 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr9-2358 chr9 98860987 98861197 + 12.5 0.000 Intergenic Intergenic 53422 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chr12-738 chr12 123271210 123271420 + 12.5 0.000 promoter-TSS (NR_073008) promoter-TSS (NR_073008) -213 NR_073008 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr2-4993 chr2 216551263 216551473 + 12.5 0.000 Intergenic Intergenic 52524 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr8-976 chr8 116548343 116548553 + 12.5 0.000 Intergenic Intergenic -103652 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr8-2767 chr8 116901297 116901507 + 12.5 0.000 Intergenic Intergenic -26536 NM_006265 5885 Hs.81848 NM_006265 ENSG00000164754 RAD21 CDLS4|HR21|HRAD21|MCD1|MGS|NXP1|SCC1|hHR21 RAD21 cohesin complex component protein-coding chr22-1310 chr22 45679537 45679747 + 12.5 0.000 intron (NM_001167621, intron 1 of 10) intron (NM_001167621, intron 1 of 10) 7808 NM_013236 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr17-4864 chr17 64591207 64591417 + 12.5 0.000 intron (NM_022739, intron 4 of 18) intron (NM_022739, intron 4 of 18) 70995 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr11-5814 chr11 7204670 7204880 + 12.5 0.000 Intergenic Intergenic -29991 NR_031683 100313774 NR_031683 ENSG00000221703 MIR302E MIRN302E microRNA 302e ncRNA chr20-2592 chr20 38360629 38360839 + 12.5 0.000 exon (NM_004139, exon 6 of 15) exon (NM_004139, exon 6 of 15) 14252 NM_004139 3929 Hs.154078 NM_004139 ENSG00000129988 LBP BPIFD2 lipopolysaccharide binding protein protein-coding chr7-2248 chr7 151148911 151149121 + 12.5 0.000 exon (NM_001098834, exon 2 of 2) exon (NM_001098834, exon 2 of 2) 18532 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr6-1138 chr6 154962852 154963062 + 12.5 0.000 Intergenic Intergenic 109597 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C - microRNA 1273c ncRNA chr9-3603 chr9 84501068 84501278 + 12.5 0.000 Intergenic Intergenic -132446 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr1-3994 chr1 159000736 159000946 + 12.5 0.000 promoter-TSS (NM_001320010) promoter-TSS (NM_001320010) -529 NM_001320010 107181291 NM_001320010 PYDC5 POP3 pyrin domain containing 5 protein-coding chr17-3668 chr17 8521424 8521634 + 12.5 0.000 intron (NM_005964, intron 15 of 40) intron (NM_005964, intron 15 of 40) 85645 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr3-2137 chr3 113098029 113098239 + 12.5 0.000 Intergenic Intergenic 69597 NR_110823 101929717 Hs.638426 NR_110823 ENSG00000243795 LINC02044 - long intergenic non-protein coding RNA 2044 ncRNA chr3-5077 chr3 44266597 44266807 + 12.5 0.000 intron (NM_001145030, intron 5 of 19) Tigger1|DNA|TcMar-Tigger 24816 NM_001145030 375337 Hs.132125 NM_001145030 ENSG00000173769 TOPAZ1 C3orf77 testis and ovary specific PAZ domain containing 1 protein-coding chr9-1984 chr9 116156940 116157150 + 12.5 0.000 intron (NM_002581, intron 1 of 21) intron (NM_002581, intron 1 of 21) 3254 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr13-1712 chr13 93535194 93535404 + 12.5 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 308492 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr3-2086 chr3 11591388 11591598 + 12.5 0.000 intron (NM_001128219, intron 2 of 4) intron (NM_001128219, intron 2 of 4) -9137 NM_001128220 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr3-6878 chr3 153130545 153130755 + 12.5 0.000 Intergenic Intergenic -31576 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr9-1724 chr9 114805761 114805971 + 12.5 0.000 exon (NM_005118, exon 1 of 4) exon (NM_005118, exon 1 of 4) 173 NM_005118 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr2-7463 chr2 14818654 14818864 + 12.5 0.000 Intergenic Intergenic 186042 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr20-932 chr20 14406542 14406752 + 12.5 0.000 intron (NM_001351663, intron 3 of 17) L2c|LINE|L2 -68980 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr7-1742 chr7 31453169 31453379 + 12.5 0.000 Intergenic MIR|SINE|MIR -60797 NM_001257967 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr8-2730 chr8 101603599 101603809 + 12.5 0.000 intron (NM_024915, intron 8 of 15) intron (NM_024915, intron 8 of 15) 111265 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr4-1296 chr4 100062022 100062232 + 12.5 0.000 Intergenic L2c|LINE|L2 111633 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chr12-1554 chr12 105326755 105326965 + 12.5 0.000 intron (NR_131986, intron 1 of 2) intron (NR_131986, intron 1 of 2) 157 NR_131986 105369954 Hs.368938 NR_131986 ENSG00000257642 KCCAT198 - renal clear cell carcinoma-associated transcript 198 ncRNA chr12-2542 chr12 104363357 104363567 + 12.5 0.000 Intergenic Intergenic 59723 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr10-4582 chr10 110084025 110084235 + 12.5 0.000 intron (NM_001121, intron 1 of 13) intron (NM_001121, intron 1 of 13) -75749 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr7-5431 chr7 36888594 36888804 + 12.5 0.000 intron (NM_001206480, intron 17 of 21) intron (NM_001206480, intron 17 of 21) 30733 NR_031604 100302113 NR_031604 ENSG00000221325 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA chr2-7067 chr2 166724527 166724737 + 12.5 0.000 Intergenic Intergenic -163855 NM_152381 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr12-948 chr12 56129255 56129465 + 12.5 0.000 intron (NM_001184796, intron 1 of 30) CpG 1158 NM_001184796 23344 Hs.632729 NM_015292 ENSG00000139641 ESYT1 FAM62A|MBC2 extended synaptotagmin 1 protein-coding chr15-1380 chr15 92832569 92832779 + 12.5 0.000 Intergenic Intergenic 37190 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr7-5048 chr7 1582007 1582217 + 12.5 0.000 intron (NR_027328, intron 3 of 3) intron (NR_027328, intron 3 of 3) 12039 NR_027328 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr11-6536 chr11 69743060 69743270 + 12.5 0.000 Intergenic (TGAA)n|Simple_repeat|Simple_repeat 32176 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr8-1472 chr8 23532605 23532815 + 12.5 0.000 intron (NM_001317812, intron 1 of 3) intron (NM_001317812, intron 1 of 3) 3754 NM_016612 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr2-2297 chr2 62266680 62266890 + 12.5 0.000 Intergenic Intergenic 51264 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr7-1469 chr7 102611973 102612183 + 12.5 0.000 intron (NM_001277335, intron 1 of 19).2 L2b|LINE|L2 4678 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr9-2609 chr9 10819204 10819414 + 12.5 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 206103 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr5-1677 chr5 65828648 65828858 + 12.5 0.000 3' UTR (NM_020726, exon 13 of 13) 3' UTR (NM_020726, exon 13 of 13) -97801 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr11-4507 chr11 116455845 116456055 + 12.5 0.000 Intergenic L2b|LINE|L2 -183472 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr1-3250 chr1 202567884 202568094 + 12.5 0.000 intron (NM_002481, intron 22 of 23) intron (NM_002481, intron 22 of 23) 27875 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr22-2941 chr22 47918950 47919160 + 12.5 0.000 Intergenic Intergenic 287381 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA chr12-1623 chr12 104282439 104282649 + 12.5 0.000 intron (NM_001093771, intron 3 of 16) L2a|LINE|L2 -4488 NM_001261445 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr8-3558 chr8 127083305 127083515 + 12.5 0.000 non-coding (NR_109833, exon 1 of 1) non-coding (NR_109833, exon 1 of 1) -1189 NR_119373 103164619 Hs.571401 NR_119373 ENSG00000254166 PCAT2 CARLO4|CARLo-4|PCA2|TCONS_00015167 prostate cancer associated transcript 2 ncRNA chr17-1719 chr17 63425593 63425803 + 12.5 0.000 3' UTR (NM_025185, exon 26 of 26) 3' UTR (NM_025185, exon 26 of 26) 14569 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr6-5509 chr6 165260489 165260699 + 12.5 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 49011 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr10-3216 chr10 102454114 102454324 + 12.5 0.000 intron (NR_038937, intron 4 of 4) intron (NR_038937, intron 4 of 4) -2676 NM_001363580 79946 Hs.225084 NM_024886 C10orf95 - chromosome 10 open reading frame 95 protein-coding chr17-3987 chr17 67369852 67370062 + 12.5 0.000 Intergenic Intergenic -3380 NM_002816 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr7-3274 chr7 18866752 18866962 + 12.5 0.000 intron (NM_058176, intron 20 of 22) intron (NM_058176, intron 20 of 22) 250779 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr12-1368 chr12 51281663 51281873 + 12.5 0.000 intron (NM_001364779, intron 12 of 12) AluJo|SINE|Alu -11353 NM_001031628 57228 Hs.652389 NM_001031628 ENSG00000170545 SMAGP hSMAGP small cell adhesion glycoprotein protein-coding chr10-2186 chr10 13320852 13321062 + 12.5 0.000 intron (NM_001195604, intron 7 of 7) L2a|LINE|L2 -20827 NM_001323082 5264 Hs.498732 NM_006214 ENSG00000107537 PHYH LN1|LNAP1|PAHX|PHYH1|RD phytanoyl-CoA 2-hydroxylase protein-coding chr8-3090 chr8 27776869 27777079 + 12.5 0.000 exon (NM_001017420, exon 3 of 11) exon (NM_001017420, exon 3 of 11) 2420 NM_001017420 157570 Hs.99480 NM_001017420 ENSG00000171320 ESCO2 2410004I17Rik|EFO2|EFO2p|RBS|hEFO2 establishment of sister chromatid cohesion N-acetyltransferase 2 protein-coding chr2-4260 chr2 225527424 225527634 + 12.5 0.000 intron (NM_001371273, intron 4 of 7) MLT1E1|LTR|ERVL-MaLR 126643 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr4-5129 chr4 152074951 152075161 + 12.5 0.000 Intergenic Intergenic -25697 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr2-9089 chr2 203865676 203865886 + 12.5 0.000 Intergenic MER58A|DNA|hAT-Charlie -1990 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr5-3916 chr5 171177164 171177374 + 12.5 0.000 intron (NM_022897, intron 16 of 27) intron (NM_022897, intron 16 of 27) -131979 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr2-3192 chr2 216312505 216312715 + 12.5 0.000 intron (NM_020814, intron 1 of 3) L1PA17|LINE|L1 59873 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr20-2072 chr20 16971783 16971993 + 12.5 0.000 Intergenic Intergenic 223535 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr15-1638 chr15 91694237 91694447 + 12.5 0.000 Intergenic Intergenic -159366 NM_013272 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr4-1283 chr4 76764374 76764584 + 12.5 0.000 intron (NM_020859, intron 9 of 10) L1MEf|LINE|L1 133665 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr19-3894 chr19 39674184 39674394 + 12.5 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -5085 NR_034156 400696 Hs.456377 NM_207646 ENSG00000226025 LGALS17A - galectin 14 pseudogene pseudo chr7-4771 chr7 77004561 77004771 + 12.5 0.000 intron (NR_023383, intron 5 of 10) intron (NR_023383, intron 5 of 10) 23844 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr14-1317 chr14 68607682 68607892 + 12.5 0.000 intron (NM_001321809, intron 11 of 11) intron (NM_001321809, intron 11 of 11) 21000 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr5-2219 chr5 178056565 178056775 + 12.5 0.000 intron (NR_149722, intron 15 of 15) LTR5B|LTR|ERVK 47473 NR_159407 653316 Hs.652193 NM_001079527 ENSG00000204677 FAM153CP FAM153C|NY-REN-7-like family with sequence similarity 153 member C pseudo chr6-1433 chr6 153574218 153574428 + 12.5 0.000 Intergenic L1MEd|LINE|L1 -436173 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr16-3612 chr16 82701262 82701472 + 12.5 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 12436 NR_107025 102465863 NR_107025 ENSG00000277387 MIR8058 hsa-mir-8058 microRNA 8058 ncRNA chr22-766 chr22 37496635 37496845 + 12.5 0.000 intron (NM_014550, intron 12 of 19) intron (NM_014550, intron 12 of 19) -10353 NM_001166343 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr4-1295 chr4 98929894 98930104 + 12.5 0.000 promoter-TSS (NM_001130678) promoter-TSS (NM_001130678) 638 NM_001331017 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr12-1737 chr12 52879932 52880142 + 12.5 0.000 Intergenic Intergenic 18947 NR_162090 113218482 NR_162090 MIR9898 - microRNA 9898 ncRNA chr7-2082 chr7 1420777 1420987 + 12.5 0.000 Intergenic AluSz|SINE|Alu 38588 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr11-1629 chr11 68954797 68955007 + 12.5 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 26084 NM_198923 116512 Hs.527802 NM_198923 ENSG00000172938 MRGPRD MRGD|TGR7 MAS related GPR family member D protein-coding chr7-5694 chr7 69134201 69134411 + 12.5 0.000 Intergenic Intergenic 463318 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr11-2853 chr11 8127771 8127981 + 12.5 0.000 intron (NM_001346693, intron 5 of 6) intron (NM_001346693, intron 5 of 6) 41149 NM_001206672 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr1-10714 chr1 193927350 193927560 + 12.5 0.000 Intergenic LTR2752|LTR|ERV1 622710 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr1-10699 chr1 191238390 191238600 + 12.5 0.000 Intergenic HERVL-int|LTR|ERVL -9997 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr10-4152 chr10 84845979 84846189 + 12.5 0.000 Intergenic MIRb|SINE|MIR 352821 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr11-2662 chr11 64156627 64156837 + 12.5 0.000 intron (NM_014067, intron 1 of 10) intron (NM_014067, intron 1 of 10) 9381 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 mono-ADP ribosylhydrolase 1 protein-coding chr16-1054 chr16 200470 200680 + 12.5 0.000 intron (NM_001330420, intron 5 of 9) AluSz6|SINE|Alu 20116 NM_005331 3049 Hs.247921 NM_005331 ENSG00000086506 HBQ1 HBQ hemoglobin subunit theta 1 protein-coding chr12-4594 chr12 32811818 32812028 + 12.5 0.000 intron (NM_001005242, intron 9 of 12) Tigger4|DNA|TcMar-Tigger -56026 NM_001040436 51067 Hs.505231 NM_015936 ENSG00000139131 YARS2 CGI-04|MLASA2|MT-TYRRS|TYRRS tyrosyl-tRNA synthetase 2 protein-coding chr4-4358 chr4 39229941 39230151 + 12.5 0.000 intron (NM_025132, intron 17 of 36) L2c|LINE|L2 47517 NM_001317924 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr14-1332 chr14 73714869 73715079 + 12.5 0.000 promoter-TSS (NM_006029) promoter-TSS (NM_006029) -590 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding chr2-4068 chr2 121975049 121975259 + 12.5 0.000 Intergenic Intergenic 219503 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr3-1841 chr3 74067335 74067545 + 12.5 0.000 Intergenic Intergenic 258196 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr13-2510 chr13 59099694 59099904 + 12.5 0.000 Intergenic LTR81C|LTR|Gypsy -866682 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr4-2225 chr4 143667603 143667813 + 12.5 0.000 intron (NM_001168235, intron 2 of 7) OldhAT1|DNA|hAT-Ac 32967 NM_001168235 166752 Hs.252714 NM_001168235 ENSG00000183090 FREM3 - FRAS1 related extracellular matrix 3 protein-coding chr15-1334 chr15 33420027 33420237 + 12.5 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 109165 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr18-1709 chr18 2468144 2468354 + 12.5 0.000 Intergenic Intergenic 103256 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr2-3287 chr2 62457141 62457351 + 12.5 0.000 Intergenic CpG 48949 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr1-3264 chr1 211492676 211492886 + 12.5 0.000 5' UTR (NM_001164688, exon 1 of 3) 5' UTR (NM_001164688, exon 1 of 3) 136 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr13-1711 chr13 93405748 93405958 + 12.5 0.000 intron (NM_005708, intron 1 of 8) MLT1H1|LTR|ERVL-MaLR 179046 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr19-2821 chr19 51688260 51688470 + 12.5 0.000 non-coding (NR_108100, exon 2 of 2) non-coding (NR_108100, exon 2 of 2) -1069 NM_001316994 147650 Hs.467174 NM_207324 ENSG00000182310 SPACA6 LET7EH|LINC00085|NCRNA00085|SPACA6P sperm acrosome associated 6 protein-coding chr19-2775 chr19 44931311 44931521 + 12.5 0.000 TTS (NR_028412) TTS (NR_028412) 4613 NR_028414 342 Hs.110675 NR_028412 ENSG00000214855 APOC1P1 - apolipoprotein C1 pseudogene 1 pseudo chr16-785 chr16 29805282 29805492 + 12.5 0.000 promoter-TSS (NM_001276275) promoter-TSS (NM_001276275) -737 NM_001276275 4150 Hs.23650 NM_002383 ENSG00000103495 MAZ PUR1|Pur-1|SAF-1|SAF-2|SAF-3|ZF87|ZNF801|Zif87 MYC associated zinc finger protein protein-coding chr3-6375 chr3 88810323 88810533 + 12.5 0.000 Intergenic Intergenic -297193 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr12-4468 chr12 15757046 15757256 + 12.5 0.000 intron (NM_004447, intron 1 of 20) L2c|LINE|L2 32237 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr11-1430 chr11 65122304 65122514 + 12.5 0.000 promoter-TSS (NM_004927) promoter-TSS (NM_004927) 88 NM_004927 740 Hs.744882 NM_004927 ENSG00000149792 MRPL49 C11orf4|L49mt|MRP-L49|NOF|NOF1 mitochondrial ribosomal protein L49 protein-coding chr4-1428 chr4 57023256 57023466 + 12.5 0.000 exon (NM_001303268, exon 18 of 24) exon (NM_001303268, exon 18 of 24) 44465 NM_000938 5431 Hs.602757 NM_000938 ENSG00000047315 POLR2B POL2RB|RPB2|hRPB140 RNA polymerase II subunit B protein-coding chr11-6890 chr11 104003366 104003576 + 12.5 0.000 intron (NM_025208, intron 1 of 6) intron (NM_025208, intron 1 of 6) -33169 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr12-5336 chr12 115355489 115355699 + 12.5 0.000 Intergenic L2c|LINE|L2 -671419 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr3-2472 chr3 124119072 124119282 + 12.5 0.000 intron (NM_001024660, intron 1 of 59) intron (NM_001024660, intron 1 of 59) -13752 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr1-8850 chr1 3407898 3408108 + 12.5 0.000 intron (NM_022114, intron 8 of 16) intron (NM_022114, intron 8 of 16) -46662 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr5-6140 chr5 35678038 35678248 + 12.5 0.000 intron (NM_024867, intron 10 of 36) intron (NM_024867, intron 10 of 36) 60280 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr20-638 chr20 57220819 57221029 + 12.5 0.000 intron (NM_001719, intron 2 of 6) intron (NM_001719, intron 2 of 6) 7228 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr17-2274 chr17 28534907 28535117 + 12.5 0.000 exon (NM_003593, exon 7 of 8) exon (NM_003593, exon 7 of 8) 11071 NM_003593 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chr3-1994 chr3 173305446 173305656 + 12.5 0.000 Intergenic AluJb|SINE|Alu -90401 NM_001365929 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr1-3725 chr1 224113844 224114054 + 12.5 0.000 promoter-TSS (NM_015176) promoter-TSS (NM_015176) -162 NM_001136115 23219 Hs.64691 NM_015176 ENSG00000143756 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding chr8-4714 chr8 141140255 141140465 + 12.5 0.000 intron (NM_001362798, intron 3 of 21) intron (NM_001362798, intron 3 of 21) 11771 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr8-1175 chr8 30543621 30543831 + 12.5 0.000 intron (NM_001008710, intron 5 of 8) intron (NM_001008710, intron 5 of 8) -94854 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr12-1628 chr12 110548864 110549074 + 12.5 0.000 intron (NM_139283, intron 2 of 5) intron (NM_139283, intron 2 of 5) 34349 NR_138550 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr10-2780 chr10 126384516 126384726 + 12.5 0.000 intron (NM_001288974, intron 1 of 18) HAL1|LINE|L1 3856 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding ML143377.1-3 ML143377.1 224838 225048 + 12.5 0.000 NA NA NA NA chr5-5361 chr5 132457606 132457816 + 12.5 0.000 intron (NR_161242, intron 3 of 3) intron (NR_161242, intron 3 of 3) 33062 NR_149068 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr20-1278 chr20 47274665 47274875 + 12.5 0.000 intron (NM_001281774, intron 12 of 23) intron (NM_001281774, intron 12 of 23) -43732 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr5-1021 chr5 131164611 131164821 + 12.5 0.000 intron (NM_005340, intron 1 of 2) CpG 540 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr1-3813 chr1 19479344 19479554 + 12.5 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 4846 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr19-1840 chr19 8607476 8607686 + 12.5 0.000 intron (NM_030957, intron 2 of 25) intron (NM_030957, intron 2 of 25) 3134 NM_030957 81794 Hs.657508 NM_030957 ENSG00000142303 ADAMTS10 ADAM-TS10|ADAMTS-10|WMS|WMS1 ADAM metallopeptidase with thrombospondin type 1 motif 10 protein-coding chr3-3210 chr3 194930814 194931024 + 12.5 0.000 Intergenic Intergenic -162210 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr9-1793 chr9 16120227 16120437 + 12.5 0.000 Intergenic Intergenic 132775 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr9-4465 chr9 27714727 27714937 + 12.5 0.000 Intergenic MIRb|SINE|MIR -140966 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr7-6421 chr7 156843085 156843295 + 12.5 0.000 intron (NR_146958, intron 1 of 14) intron (NR_146958, intron 1 of 14) 49993 NM_001363409 64327 Hs.209989 NM_022458 ENSG00000105983 LMBR1 ACHP|C7orf2|DIF14|LSS|PPD2|THYP|TPT|ZRS limb development membrane protein 1 protein-coding chr4-4468 chr4 55225734 55225944 + 12.5 0.000 Intergenic L2c|LINE|L2 -100244 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr1-2102 chr1 151541103 151541313 + 12.5 0.000 intron (NM_001126337, intron 1 of 11) intron (NM_001126337, intron 1 of 11) 899 NM_020127 7286 Hs.489922 NM_020127 ENSG00000143367 TUFT1 - tuftelin 1 protein-coding chr11-1616 chr11 62440184 62440394 + 12.5 0.000 intron (NM_024060, intron 5 of 5) intron (NM_024060, intron 5 of 5) 21256 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr12-1462 chr12 550650 550860 + 12.5 0.000 intron (NM_173593, intron 10 of 19) intron (NM_173593, intron 10 of 19) 35731 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr10-2412 chr10 132432390 132432600 + 12.5 0.000 Intergenic Intergenic -12694 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr17-4578 chr17 82554473 82554683 + 12.5 0.000 intron (NM_004514, intron 1 of 8) intron (NM_004514, intron 1 of 8) 34846 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr2-3876 chr2 38947292 38947502 + 12.5 0.000 intron (NM_001145451, intron 8 of 15) AluJr|SINE|Alu 12947 NR_028386 375196 Hs.659035 NR_028386 ENSG00000269210 LOC375196 - uncharacterized LOC375196 ncRNA chr7-2657 chr7 5116304 5116514 + 12.5 0.000 Intergenic Intergenic 28137 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr1-4650 chr1 185117702 185117912 + 12.5 0.000 TTS (NM_001202423) TTS (NM_001202423) 39146 NM_030934 81627 Hs.107149 NM_030934 ENSG00000121486 TRMT1L C1orf25|MST070|MSTP070|TRM1L|bG120K12.3 tRNA methyltransferase 1 like protein-coding chr11-3139 chr11 46281614 46281824 + 12.5 0.000 intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 4057 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr1-7088 chr1 191970464 191970674 + 12.5 0.000 Intergenic Intergenic -187893 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr17-5744 chr17 58653995 58654205 + 12.5 0.000 intron (NM_031272, intron 1 of 31) AluY|SINE|Alu 37955 NM_001201457 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113|SPGF23 testis expressed 14, intercellular bridge forming factor protein-coding chr8-3633 chr8 596738 596948 + 12.5 0.000 Intergenic HAL1|LINE|L1 -51062 NM_175075 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr16-1284 chr16 74625558 74625768 + 12.5 0.000 intron (NM_001370543, intron 12 of 12) L1MC5a|LINE|L1 -18549 NM_001145667 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr17-1575 chr17 39153495 39153705 + 12.5 0.000 Intergenic MER5A|DNA|hAT-Charlie -1963 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr5-1983 chr5 150559817 150560027 + 12.5 0.000 Intergenic L1ME3G|LINE|L1 -41154 NM_001166208 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr14-1098 chr14 68824859 68825069 + 12.5 0.000 Intergenic Intergenic -28721 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr7-2562 chr7 105578558 105578768 + 12.5 0.000 intron (NM_001355527, intron 1 of 3) HAL1|LINE|L1 2830 NM_001355526 100130771 Hs.719432 NM_001355526 ENSG00000185055 EFCAB10 - EF-hand calcium binding domain 10 protein-coding chr10-3678 chr10 103040191 103040401 + 12.5 0.000 intron (NM_199076, intron 1 of 6) intron (NM_199076, intron 1 of 6) 113525 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr7-2648 chr7 2621223 2621433 + 12.5 0.000 Intergenic L2b|LINE|L2 -10658 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr7-7437 chr7 77909193 77909403 + 12.5 0.000 intron (NM_001366085, intron 6 of 10) intron (NM_001366085, intron 6 of 10) 69168 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr11-4263 chr11 65685518 65685728 + 12.5 0.000 Intergenic MER66-int|LTR|ERV1 -22651 NM_001243985 5970 Hs.502875 NM_021975 ENSG00000173039 RELA CMCU|NFKB3|p65 RELA proto-oncogene, NF-kB subunit protein-coding chr16-2162 chr16 62217488 62217698 + 12.5 0.000 Intergenic LTR7B|LTR|ERV1 -181155 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr21-384 chr21 32702855 32703065 + 12.5 0.000 intron (NM_203446, intron 2 of 32) intron (NM_203446, intron 2 of 32) 24961 NM_001160306 8867 Hs.473632 NM_003895 ENSG00000159082 SYNJ1 EIEE53|INPP5G|PARK20 synaptojanin 1 protein-coding chr18-902 chr18 57152730 57152940 + 12.5 0.000 Intergenic Intergenic 5748 NM_001257964 284257 Hs.127882 NM_001257964 ENSG00000228075 BOD1L2 BOD1P|FAM44C biorientation of chromosomes in cell division 1 like 2 protein-coding chr3-2313 chr3 126529024 126529234 + 12.5 0.000 intron (NR_130715, intron 5 of 5) intron (NR_130715, intron 5 of 5) 4974 NM_152889 166012 Hs.292375 NM_152889 ENSG00000180767 CHST13 C4ST3 carbohydrate sulfotransferase 13 protein-coding chr6-2832 chr6 163526736 163526946 + 12.5 0.000 intron (NM_206853, intron 3 of 6) intron (NM_206853, intron 3 of 6) 112123 NM_006775 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr18-652 chr18 42192940 42193150 + 12.5 0.000 intron (NR_046174, intron 1 of 9) MER44B|DNA|TcMar-Tigger 6377 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr2-3511 chr2 223383476 223383686 + 12.5 0.000 Intergenic Intergenic 218780 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr4-5152 chr4 154617721 154617931 + 12.5 0.000 Intergenic Intergenic -5018 NM_000509 2266 Hs.727584 NM_000509 ENSG00000171557 FGG - fibrinogen gamma chain protein-coding chr14-1258 chr14 21107032 21107242 + 12.5 0.000 Intergenic Intergenic -2433 NM_001102454 51222 Hs.250493 NM_016423 ENSG00000165804 ZNF219 ZFP219 zinc finger protein 219 protein-coding chr2-9272 chr2 221467668 221467878 + 12.5 0.000 intron (NM_001363748, intron 5 of 17) intron (NM_001363748, intron 5 of 17) 104531 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr2-3932 chr2 58140580 58140790 + 12.5 0.000 intron (NM_001130483, intron 11 of 13) intron (NM_001130483, intron 11 of 13) 93973 NM_001130481 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr9-2955 chr9 136759174 136759384 + 12.5 0.000 promoter-TSS (NM_001345934) promoter-TSS (NM_001345934) -736 NM_001345934 138307 Hs.323991 NM_178469 ENSG00000204001 LCN8 EP17|LCN5 lipocalin 8 protein-coding chr3-6173 chr3 59665906 59666116 + 12.5 0.000 Intergenic AluJb|SINE|Alu -7514 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr22-396 chr22 20150410 20150620 + 12.5 0.000 exon (NM_001365892, exon 1 of 9) exon (NM_001365892, exon 1 of 9) 540 NM_001365892 388849 Hs.454905 NM_001243537 ENSG00000234409 CCDC188 - coiled-coil domain containing 188 protein-coding chr5-577 chr5 172188595 172188805 + 12.5 0.000 promoter-TSS (NM_005990) promoter-TSS (NM_005990) -476 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr10-3089 chr10 13878169 13878379 + 12.5 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 93622 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr10-5314 chr10 70849647 70849857 + 12.5 0.000 intron (NM_003901, intron 3 of 14) intron (NM_003901, intron 3 of 14) 33804 NM_003901 8879 Hs.499984 NM_003901 ENSG00000166224 SGPL1 NPHS14|S1PL|SPL sphingosine-1-phosphate lyase 1 protein-coding chr3-2025 chr3 58577309 58577519 + 12.5 0.000 promoter-TSS (NM_001076778) promoter-TSS (NM_001076778) -23 NM_007177 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr3-1670 chr3 184206809 184207019 + 12.5 0.000 Intergenic Intergenic 20839 NM_001351300 55324 Hs.361323 NM_018358 ENSG00000161204 ABCF3 EST201864 ATP binding cassette subfamily F member 3 protein-coding chr4-4094 chr4 5121723 5121933 + 12.5 0.000 intron (NM_001306082, intron 1 of 12) intron (NM_001306082, intron 1 of 12) 70348 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr1-3970 chr1 153545047 153545257 + 12.5 0.000 promoter-TSS (NR_125947) promoter-TSS (NR_125947) -590 NR_125947 101928034 Hs.711397 NR_125947 LOC101928034 - uncharacterized LOC101928034 ncRNA chr6-1061 chr6 16339069 16339279 + 12.5 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 100587 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr3-2921 chr3 52491007 52491217 + 12.5 0.000 intron (NM_007184, intron 19 of 20) intron (NM_007184, intron 19 of 20) -4226 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr19-2345 chr19 47057525 47057735 + 12.5 0.000 Intergenic MER92A|LTR|ERV1 -9006 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chr3-2967 chr3 72818203 72818413 + 12.5 0.000 intron (NM_018130, intron 6 of 10) L1MC5|LINE|L1 30137 NM_018130 55164 Hs.606584 NM_018130 ENSG00000144736 SHQ1 GRIM-1|Shq1p SHQ1, H/ACA ribonucleoprotein assembly factor protein-coding chr3-2225 chr3 37504237 37504447 + 12.5 0.000 intron (NM_002207, intron 6 of 27) MIRb|SINE|MIR 52201 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr2-7093 chr2 174350016 174350226 + 12.5 0.000 intron (NM_004882, intron 9 of 9) intron (NM_004882, intron 9 of 9) 15167 NM_001145250 100131390 NM_001145250 ENSG00000217236 SP9 ZNF990 Sp9 transcription factor protein-coding chrX-2586 chrX 104532883 104533093 + 12.5 0.000 Intergenic ERVL-E-int|LTR|ERVL -33211 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr4-6135 chr4 27093778 27093988 + 12.5 0.000 Intergenic MIR|SINE|MIR -123596 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr11-4543 chr11 120413719 120413929 + 12.5 0.000 intron (NM_015313, intron 4 of 40) intron (NM_015313, intron 4 of 40) 28497 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr16-1574 chr16 86124284 86124494 + 12.5 0.000 Intergenic Intergenic -71792 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr11-1970 chr11 10659903 10660113 + 12.5 0.000 intron (NM_130385, intron 1 of 20) MIRc|SINE|MIR -7707 NM_001098579 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr2-6871 chr2 76277773 76277983 + 12.5 0.000 Intergenic Intergenic -566963 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr11-4448 chr11 96706605 96706815 + 12.5 0.000 Intergenic LTR32|LTR|ERVL 198285 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr21-481 chr21 45942653 45942863 + 12.5 0.000 TTS (NM_001130141) TTS (NM_001130141) -30212 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr18-937 chr18 78742012 78742222 + 12.5 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -238158 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr10-1314 chr10 73817041 73817251 + 12.5 0.000 intron (NR_160046, intron 17 of 19) intron (NR_160046, intron 17 of 19) -5326 NR_160744 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr6-2783 chr6 139757985 139758195 + 12.5 0.000 Intergenic Intergenic -12983 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr17-3736 chr17 27858820 27859030 + 12.5 0.000 Intergenic Intergenic 34440 NM_001076680 201229 Hs.687951 NM_001076680 ENSG00000232859 LYRM9 C17orf108|HSD24 LYR motif containing 9 protein-coding chr3-4124 chr3 115062700 115062910 + 12.5 0.000 intron (NM_015642, intron 1 of 9) intron (NM_015642, intron 1 of 9) 8609 NM_001164343 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr2-7910 chr2 57373170 57373380 + 12.5 0.000 Intergenic Intergenic -534376 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr17-2196 chr17 75899084 75899294 + 12.5 0.000 exon (NM_032478, exon 8 of 9) exon (NM_032478, exon 8 of 9) -2238 NM_173547 201292 Hs.189823 NM_173547 ENSG00000141569 TRIM65 4732463G12Rik tripartite motif containing 65 protein-coding chr20-1206 chr20 13336375 13336585 + 12.5 0.000 Intergenic Intergenic -96793 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr11-2723 chr11 3982536 3982746 + 12.5 0.000 intron (NM_001277962, intron 2 of 12) intron (NM_001277962, intron 2 of 12) -112044 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr16-1095 chr16 77236056 77236266 + 12.5 0.000 Intergenic Intergenic 36753 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding chr21-1162 chr21 42210944 42211154 + 12.5 0.000 intron (NM_207628, intron 3 of 16) AluSc8|SINE|Alu -5028 NM_207629 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr1-9180 chr1 21184277 21184487 + 12.5 0.000 Intergenic MIRb|SINE|MIR -7485 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr21-352 chr21 37636701 37636911 + 12.5 0.000 intron (NM_002240, intron 3 of 3) intron (NM_002240, intron 3 of 3) 216507 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr5-1263 chr5 84383068 84383278 + 12.5 0.000 intron (NM_001278642, intron 1 of 9) intron (NM_001278642, intron 1 of 9) 1694 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr11-3487 chr11 105862918 105863128 + 12.5 0.000 intron (NR_046356, intron 4 of 16) intron (NR_046356, intron 4 of 16) 159217 NM_032424 84437 Hs.266782 NM_032424 ENSG00000170903 MSANTD4 KIAA1826 Myb/SANT DNA binding domain containing 4 with coiled-coils protein-coding chr11-2511 chr11 69351621 69351831 + 12.5 0.000 Intergenic L1ME1|LINE|L1 57571 NM_001293294 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr13-1545 chr13 29496137 29496347 + 12.5 0.000 intron (NM_015233, intron 5 of 8) intron (NM_015233, intron 5 of 8) -8492 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr19-2751 chr19 40626454 40626664 + 12.5 0.000 intron (NM_003573, intron 30 of 32) (CTCAGTC)n|Simple_repeat|Simple_repeat 25190 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chr16-1603 chr16 66947410 66947620 + 12.5 0.000 Intergenic Intergenic 11999 NM_001365406 8824 Hs.282975 NM_003869 ENSG00000172831 CES2 CE-2|CES2A1|PCE-2|iCE carboxylesterase 2 protein-coding chr1-5911 chr1 12360117 12360327 + 12.5 0.000 intron (NM_015378, intron 50 of 69) intron (NM_015378, intron 50 of 69) 130192 NM_015378 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr5-1294 chr5 10485278 10485488 + 12.5 0.000 Intergenic Intergenic 7346 NR_106747 102465138 NR_106747 ENSG00000277073 MIR6131 hsa-mir-6131 microRNA 6131 ncRNA chr1-5309 chr1 220182824 220183034 + 12.5 0.000 exon (NM_012414, exon 20 of 35) exon (NM_012414, exon 20 of 35) 17690 NR_031705 100302234 NR_031705 ENSG00000281696 MIR664A MIR664|MIRN664|hsa-mir-664|hsa-mir-664a|mir-664a microRNA 664a ncRNA chr12-4497 chr12 21172261 21172471 + 12.5 0.000 intron (NM_006446, intron 2 of 14) intron (NM_006446, intron 2 of 14) 41172 NM_006446 10599 Hs.449738 NM_006446 ENSG00000134538 SLCO1B1 HBLRR|LST-1|LST1|OATP-C|OATP1B1|OATP2|OATPC|SLC21A6 solute carrier organic anion transporter family member 1B1 protein-coding chr14-1689 chr14 96393228 96393438 + 12.5 0.000 intron (NM_001350890, intron 1 of 16) intron (NM_001350890, intron 1 of 16) 1205 NM_001350888 122481 Hs.667462 NM_152327 ENSG00000140057 AK7 AK 7|SPGF27 adenylate kinase 7 protein-coding chr3-1631 chr3 62567411 62567621 + 12.5 0.000 intron (NM_003716, intron 9 of 29) intron (NM_003716, intron 9 of 29) -193966 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr2-11414 chr2 219050361 219050571 + 12.5 0.000 Intergenic Intergenic 8284 NR_036081 100422957 NR_036081 ENSG00000264755 MIR3131 mir-3131 microRNA 3131 ncRNA chr14-1364 chr14 103980689 103980899 + 12.5 0.000 intron (NM_153046, intron 7 of 35) LTR13|LTR|ERVK -38265 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr21-1065 chr21 30542687 30542897 + 12.5 0.000 promoter-TSS (NM_001303120) promoter-TSS (NM_001303120) -928 NM_001303120 337973 Hs.553695 NM_181612 ENSG00000186925 KRTAP19-6 KAP19.6 keratin associated protein 19-6 protein-coding chr15-1197 chr15 41949897 41950107 + 12.5 0.000 intron (NM_139265, intron 2 of 5) intron (NM_139265, intron 2 of 5) 22555 NM_139265 30844 Hs.143703 NM_139265 ENSG00000103966 EHD4 PAST4 EH domain containing 4 protein-coding chr14-627 chr14 30558832 30559042 + 12.5 0.000 promoter-TSS (NM_001308097) promoter-TSS (NM_001308097) -186 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr11-2665 chr11 65157265 65157475 + 12.5 0.000 Intergenic AluSz|SINE|Alu -12784 NM_001008778 387778 Hs.450642 NM_001008778 ENSG00000204710 SPDYC RINGOC|Ringo2 speedy/RINGO cell cycle regulator family member C protein-coding chr18-249 chr18 3246061 3246271 + 12.5 0.000 Intergenic Intergenic -1316 NM_001303048 10627 Hs.190086 NM_006471 ENSG00000101608 MYL12A HEL-S-24|MLC-2B|MLCB|MRCL3|MRLC3|MYL2B myosin light chain 12A protein-coding chr4-1205 chr4 89434304 89434514 + 12.5 0.000 Intergenic L2b|LINE|L2 -126609 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr8-1768 chr8 54382241 54382451 + 12.5 0.000 Intergenic Intergenic 51660 NR_004385 26766 NR_004385 ENSG00000199212 RNU105C E1-5|E1-6 RNA, U105C small nucleolar snoRNA chr3-2520 chr3 15647733 15647943 + 12.5 0.000 TTS (NM_001323582) TTS (NM_001323582) 45869 NM_001281725 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr4-5203 chr4 163374159 163374369 + 12.5 0.000 Intergenic Intergenic 30162 NM_001317091 4889 Hs.519058 NM_006174 ENSG00000164129 NPY5R NPY5-R|NPYR5|NPYY5-R neuropeptide Y receptor Y5 protein-coding chr6-4628 chr6 46888104 46888314 + 12.5 0.000 intron (NM_001098518, intron 4 of 20) intron (NM_001098518, intron 4 of 20) -15262 NR_110658 101926962 Hs.680113 NR_110658 LOC101926962 - uncharacterized LOC101926962 ncRNA chr5-2511 chr5 155144668 155144878 + 12.5 0.000 Intergenic MIR|SINE|MIR 131018 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr5-4826 chr5 61139207 61139417 + 12.5 0.000 intron (NM_174889, intron 3 of 3) MER47B|DNA|TcMar-Tigger -23004 NR_109908 101928630 Hs.575209 NR_109908 SMIM15-AS1 CTC-436P18.1 SMIM15 antisense RNA 1 ncRNA chr7-2179 chr7 78953764 78953974 + 12.5 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -55119 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr15-1943 chr15 98651271 98651481 + 12.5 0.000 promoter-TSS (NR_126453) promoter-TSS (NR_126453) -155 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr2-4084 chr2 133097649 133097859 + 12.5 0.000 intron (NM_207481, intron 6 of 17) intron (NM_207481, intron 6 of 17) -168441 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr16-1431 chr16 53103877 53104087 + 12.5 0.000 intron (NM_025134, intron 1 of 38) MIRc|SINE|MIR -27030 NM_001352127 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr14-979 chr14 75636432 75636642 + 12.5 0.000 intron (NM_017791, intron 5 of 9) intron (NM_017791, intron 5 of 9) 24339 NM_007176 11161 Hs.15106 NM_007176 ENSG00000133935 ERG28 C14orf1|NET51 ergosterol biosynthesis 28 homolog protein-coding chr3-2156 chr3 138068725 138068935 + 12.5 0.000 TTS (NM_001170538) TTS (NM_001170538) 44650 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr2-1172 chr2 241610188 241610398 + 12.5 0.000 intron (NM_015963, intron 2 of 5) CpG 7208 NM_001164356 51078 Hs.435759 NM_015963 ENSG00000176946 THAP4 CGI-36|Nb(III)|PP238 THAP domain containing 4 protein-coding chr7-2894 chr7 128919694 128919904 + 12.5 0.000 Intergenic Intergenic -9090 NM_001366122 375616 Hs.371746 NM_199349 ENSG00000135253 KCP CRIM2|KCP1|NET67 kielin cysteine rich BMP regulator protein-coding chr3-2558 chr3 66442498 66442708 + 12.5 0.000 intron (NM_015541, intron 3 of 18) intron (NM_015541, intron 3 of 18) 57818 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr11-2129 chr11 3939879 3940089 + 12.5 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 83922 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr1-12417 chr1 10893712 10893922 + 12.5 0.000 Intergenic AluSx1|SINE|Alu 72870 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr9-5561 chr9 111066432 111066642 + 12.5 0.000 Intergenic Intergenic -27539 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr1-9159 chr1 19801388 19801598 + 12.5 0.000 Intergenic Intergenic -1577 NM_001349114 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr16-3617 chr16 84362827 84363037 + 12.5 0.000 Intergenic L2a|LINE|L2 -5591 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr11-1903 chr11 61747820 61748030 + 12.5 0.000 TTS (NM_006133) TTS (NM_006133) -4711 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr14-2124 chr14 75877473 75877683 + 12.5 0.000 intron (NM_015072, intron 29 of 31) intron (NM_015072, intron 29 of 31) 104417 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr16-3871 chr16 69904041 69904251 + 12.5 0.000 intron (NM_001270453, intron 5 of 20) intron (NM_001270453, intron 5 of 20) -20893 NM_199424 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr4-3465 chr4 110900253 110900463 + 12.5 0.000 Intergenic Intergenic -39711 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr19-2347 chr19 47663753 47663963 + 12.5 0.000 intron (NM_015711, intron 1 of 14) MER112|DNA|hAT-Charlie -49564 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr22-2644 chr22 34852775 34852985 + 12.5 0.000 intron (NR_138042, intron 3 of 4) intron (NR_138042, intron 3 of 4) 145036 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr17-3998 chr17 70040441 70040651 + 12.5 0.000 Intergenic MER5A1|DNA|hAT-Charlie -10725 NR_104130 101928141 Hs.639899 NR_104129 ENSG00000267603 LINC01028 TCONS_00025127 long intergenic non-protein coding RNA 1028 ncRNA chr8-4208 chr8 85350245 85350455 + 12.5 0.000 intron (NM_001128829, intron 1 of 8) intron (NM_001128829, intron 1 of 8) -8636 NM_001164830 759 Hs.23118 NM_001738 ENSG00000133742 CA1 CA-I|CAB|Car1|HEL-S-11 carbonic anhydrase 1 protein-coding chr22-2233 chr22 24719379 24719589 + 12.5 0.000 non-coding (NR_045648, exon 22 of 22) non-coding (NR_045648, exon 22 of 22) -45017 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo chr22-1111 chr22 38030202 38030412 + 12.5 0.000 intron (NM_001301130, intron 5 of 5) MER63A|DNA|hAT-Blackjack -26948 NM_001039583 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr11-2429 chr11 27390873 27391083 + 12.5 0.000 intron (NM_018490, intron 4 of 17) intron (NM_018490, intron 4 of 17) -27730 NM_080654 91057 Hs.143733 NM_030771 ENSG00000109881 CCDC34 L15|NY-REN-41|RAMA3 coiled-coil domain containing 34 protein-coding chr11-1615 chr11 61601784 61601994 + 12.5 0.000 intron (NR_110189, intron 2 of 3) intron (NR_110189, intron 2 of 3) -13147 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr16-1671 chr16 81442493 81442703 + 12.5 0.000 Intergenic Intergenic -2572 NM_198390 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding chr5-4787 chr5 56415633 56415843 + 12.5 0.000 Intergenic Intergenic 66031 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr10-5115 chr10 49422832 49423042 + 12.5 0.000 Intergenic L1PA5|LINE|L1 -26848 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding chr2-4246 chr2 219838743 219838953 + 12.5 0.000 Intergenic Intergenic 66041 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr6-3098 chr6 90177023 90177233 + 12.5 0.000 intron (NM_021813, intron 4 of 8) L2c|LINE|L2 119715 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr5-1869 chr5 141654311 141654521 + 12.5 0.000 exon (NM_022481, exon 33 of 33) exon (NM_022481, exon 33 of 33) -2998 NM_033449 89848 Hs.591257 NM_033449 ENSG00000197948 FCHSD1 NWK2 FCH and double SH3 domains 1 protein-coding chr11-4503 chr11 115155323 115155533 + 12.5 0.000 Intergenic Intergenic -178149 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr1-6730 chr1 64827099 64827309 + 12.5 0.000 intron (NM_001366165, intron 11 of 11) L2a|LINE|L2 82129 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr7-6065 chr7 114034102 114034312 + 12.5 0.000 Intergenic L1MDa|LINE|L1 -52120 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr8-2139 chr8 22133229 22133439 + 12.5 0.000 Intergenic Intergenic -2282 NM_018411 55806 Hs.272367 NM_005144 ENSG00000168453 HR ALUNC|AU|HSA277165|HYPT4|MUHH|MUHH1 HR lysine demethylase and nuclear receptor corepressor protein-coding chr4-2007 chr4 1726392 1726602 + 12.5 0.000 intron (NM_006342, intron 3 of 15) intron (NM_006342, intron 3 of 15) 4976 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chrX-895 chrX 56566686 56566896 + 12.5 0.000 3' UTR (NM_013444, exon 1 of 1) 3' UTR (NM_013444, exon 1 of 1) 3198 NM_013444 29978 Hs.179309 NM_013444 ENSG00000188021 UBQLN2 ALS15|CHAP1|DSK2|HRIHFB2157|N4BP4|PLIC2 ubiquilin 2 protein-coding chr10-3595 chr10 89079222 89079432 + 12.5 0.000 Intergenic Intergenic -15916 NR_039827 100616192 NR_039827 ENSG00000265375 MIR4679-2 - microRNA 4679-2 ncRNA chr2-5659 chr2 197969692 197969902 + 12.5 0.000 intron (NM_006226, intron 1 of 5) MLT1I|LTR|ERVL-MaLR 165204 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr18-1730 chr18 5453781 5453991 + 12.5 0.000 intron (NM_001281535, intron 5 of 21) intron (NM_001281535, intron 5 of 21) 86670 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr10-5005 chr10 32718063 32718273 + 12.5 0.000 intron (NM_001321115, intron 26 of 43) L1PA7|LINE|L1 183304 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr13-872 chr13 27477205 27477415 + 12.5 0.000 Intergenic Intergenic -26708 NM_001166263 219402 Hs.534582 NM_152912 ENSG00000122033 MTIF3 IF3mt mitochondrial translational initiation factor 3 protein-coding chr4-2934 chr4 94672976 94673186 + 12.5 0.000 Intergenic Intergenic 84452 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr1-3373 chr1 154736793 154737003 + 12.5 0.000 intron (NM_170782, intron 3 of 7) intron (NM_170782, intron 3 of 7) -108901 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr9-5248 chr9 78348934 78349144 + 12.5 0.000 Intergenic Intergenic 51914 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr2-3027 chr2 64586969 64587179 + 12.5 0.000 intron (NM_001002243, intron 8 of 8) intron (NM_001002243, intron 8 of 8) -20238 NR_034023 339807 Hs.434736 NR_034023 ENSG00000233694 LINC02579 - long intergenic non-protein coding RNA 2579 ncRNA chr1-4421 chr1 216531364 216531574 + 12.5 0.000 intron (NM_001243518, intron 6 of 7) intron (NM_001243518, intron 6 of 7) -108021 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr17-1706 chr17 45265971 45266181 + 12.5 0.000 intron (NM_003954, intron 14 of 15) intron (NM_003954, intron 14 of 15) -3982 NM_152343 124783 Hs.412719 NM_152343 ENSG00000184361 SPATA32 AEP2|C17orf46|TEX34|VAD1.2 spermatogenesis associated 32 protein-coding chr3-3700 chr3 168467539 168467749 + 12.5 0.000 intron (NR_021485, intron 3 of 15) intron (NR_021485, intron 3 of 15) -84210 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr17-1056 chr17 28743098 28743308 + 12.5 0.000 promoter-TSS (NM_004295) promoter-TSS (NM_004295) -808 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr7-3311 chr7 50813066 50813276 + 12.5 0.000 Intergenic Intergenic -19718 NM_001371008 chr19-1661 chr19 48868360 48868570 + 12.5 0.000 5' UTR (NM_001161354, exon 1 of 17) 5' UTR (NM_001161354, exon 1 of 17) 152 NM_001161354 57664 Hs.9469 NM_020904 ENSG00000105559 PLEKHA4 PEPP1 pleckstrin homology domain containing A4 protein-coding chr11-3013 chr11 455593 455803 + 12.5 0.000 intron (NM_030783, intron 1 of 11) intron (NM_030783, intron 1 of 11) 5419 NM_001329544 81490 Hs.12851 NM_030783 ENSG00000174915 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding chr8-865 chr8 92103453 92103663 + 12.5 0.000 promoter-TSS (NM_175634) promoter-TSS (NM_175634) -173 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr16-2026 chr16 19773045 19773255 + 12.5 0.000 intron (NM_001305122, intron 7 of 8) intron (NM_001305122, intron 7 of 8) -54923 NM_001348534 400506 Hs.585209 NM_001012991 ENSG00000103550 KNOP1 101F10.1|C16orf88|FAM191A|TSG118 lysine rich nucleolar protein 1 protein-coding chr4-1106 chr4 7937974 7938184 + 12.5 0.000 promoter-TSS (NM_203423) promoter-TSS (NM_203423) -922 NM_203423 389199 Hs.375210 NM_203423 LOC389199 - uncharacterized LOC389199 protein-coding chr22-1089 chr22 30502485 30502695 + 12.5 0.000 intron (NM_001161368, intron 2 of 11) AluJb|SINE|Alu 3105 NM_174977 284904 Hs.517541 NM_174977 ENSG00000133488 SEC14L4 TAP3 SEC14 like lipid binding 4 protein-coding chr9-2585 chr9 136823439 136823649 + 12.5 0.000 exon (NM_024718, exon 2 of 15) exon (NM_024718, exon 2 of 15) -7413 NR_036251 100422860 NR_036251 ENSG00000265806 MIR4292 - microRNA 4292 ncRNA chr10-2149 chr10 78263568 78263778 + 12.5 0.000 Intergenic Intergenic -3669 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr7-4356 chr7 52960775 52960985 + 12.5 0.000 Intergenic L1PB4|LINE|L1 -74753 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr12-5170 chr12 103509462 103509672 + 12.5 0.000 Intergenic Intergenic 13527 NR_135004 105369945 Hs.742785 NR_135004 LOC105369945 - uncharacterized LOC105369945 ncRNA chr14-3242 chr14 76147567 76147777 + 12.5 0.000 Intergenic L2b|LINE|L2 -4213 NM_001322029 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr11-3361 chr11 123137545 123137755 + 12.5 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 57598 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr10-4908 chr10 21732239 21732449 + 12.5 0.000 intron (NM_001195626, intron 17 of 22) intron (NM_001195626, intron 17 of 22) 198172 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr3-6506 chr3 113088657 113088867 + 12.5 0.000 Intergenic Intergenic -69091 NM_001319109 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr1-2931 chr1 39490884 39491094 + 12.5 0.000 promoter-TSS (NM_181809) promoter-TSS (NM_181809) -647 NM_181809 353500 Hs.472497 NM_181809 ENSG00000183682 BMP8A - bone morphogenetic protein 8a protein-coding chr11-4426 chr11 93233200 93233410 + 12.5 0.000 Intergenic MSTA|LTR|ERVL-MaLR -35314 NM_152313 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr17-1585 chr17 47863052 47863262 + 12.5 0.000 Intergenic Intergenic -7460 NM_199262 80320 Hs.253603 NM_199262 ENSG00000189120 SP6 EPFN|EPIPROFIN|KLF14 Sp6 transcription factor protein-coding chr7-1077 chr7 70695275 70695485 + 12.5 0.000 intron (NM_015570, intron 5 of 18) CpG -436764 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr7-3149 chr7 69389658 69389868 + 12.5 0.000 Intergenic AluJr|SINE|Alu 207861 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr9-2929 chr9 135070651 135070861 + 12.5 0.000 Intergenic Intergenic -4749 NM_006334 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr6-1679 chr6 8859599 8859809 + 12.5 0.000 Intergenic Intergenic 207495 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr14-1389 chr14 51095817 51096027 + 12.5 0.000 promoter-TSS (NM_052978) promoter-TSS (NM_052978) -218 NM_052978 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr3-2398 chr3 185452788 185452998 + 12.5 0.000 intron (NM_004721, intron 7 of 13) MLT1H|LTR|ERVL-MaLR 46142 NM_080652 90407 Hs.677570 NM_080652 ENSG00000163900 TMEM41A 2900010K02Rik transmembrane protein 41A protein-coding chr17-2183 chr17 65784130 65784340 + 12.5 0.000 intron (NM_001353129, intron 21 of 26) intron (NM_001353129, intron 21 of 26) 42216 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr2-3956 chr2 67453434 67453644 + 12.5 0.000 Intergenic Intergenic 56206 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr3-2116 chr3 55160461 55160671 + 12.5 0.000 Intergenic Intergenic -17606 NR_147142 105377096 Hs.640507 NR_147142 ENSG00000243572 LINC02017 - long intergenic non-protein coding RNA 2017 ncRNA chr11-2267 chr11 124900771 124900981 + 12.5 0.000 Intergenic Intergenic -3011 NM_019055 54538 Hs.524121 NM_019055 ENSG00000154133 ROBO4 ECSM4|MRB roundabout guidance receptor 4 protein-coding chr5-2676 chr5 36423257 36423467 + 12.5 0.000 Intergenic Intergenic -121460 NM_001323273 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr14-1269 chr14 55438067 55438277 + 12.5 0.000 intron (NM_199047, intron 1 of 6) intron (NM_199047, intron 1 of 6) 2373 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr8-1705 chr8 116837923 116838133 + 12.5 0.000 Intergenic L2a|LINE|L2 -36396 NR_033886 644660 Hs.706174 NR_033886 ENSG00000253327 RAD21-AS1 C8orf81|NCRNA00255 RAD21 antisense RNA 1 ncRNA chr2-5775 chr2 223736034 223736244 + 12.5 0.000 Intergenic MIR|SINE|MIR 101443 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr8-2877 chr8 140644073 140644283 + 12.5 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -8545 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr3-7024 chr3 171832006 171832216 + 12.5 0.000 Intergenic Intergenic -11238 NM_001164436 389177 Hs.642307 NM_001164436 ENSG00000186329 TMEM212 - transmembrane protein 212 protein-coding chr4-2235 chr4 148650009 148650219 + 12.5 0.000 Intergenic L2b|LINE|L2 -205416 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr1-2539 chr1 3592191 3592401 + 12.5 0.000 intron (NM_001409, intron 3 of 36) intron (NM_001409, intron 3 of 36) 19212 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chr17-1539 chr17 81184682 81184892 + 12.5 0.000 Intergenic Intergenic -18566 NM_001080395 9625 Hs.514575 NM_004920 ENSG00000181409 AATK AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP apoptosis associated tyrosine kinase protein-coding chr18-515 chr18 45014124 45014334 + 12.5 0.000 intron (NM_015559, intron 4 of 5) intron (NM_015559, intron 4 of 5) -44063 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr15-1174 chr15 101221878 101222088 + 12.5 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 30065 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr1-10912 chr1 209005646 209005856 + 12.5 0.000 Intergenic Intergenic 33297 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr9-2535 chr9 125994129 125994339 + 12.5 0.000 Intergenic Intergenic 246051 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr11-549 chr11 96254297 96254507 + 12.5 0.000 intron (NM_032427, intron 1 of 4) (T)n|Simple_repeat|Simple_repeat -87036 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr6-2940 chr6 28081553 28081763 + 12.5 0.000 intron (NM_003447, intron 1 of 3) intron (NM_003447, intron 1 of 3) 1090 NM_003447 7718 Hs.55481 NM_003447 ENSG00000197279 ZNF165 CT53|LD65|ZSCAN7 zinc finger protein 165 protein-coding chr12-2353 chr12 8610138 8610348 + 12.5 0.000 intron (NM_001330343, intron 1 of 4) AluJb|SINE|Alu 2616 NM_020661 57379 Hs.149342 NM_020661 ENSG00000111732 AICDA AID|ARP2|CDA2|HEL-S-284|HIGM2 activation induced cytidine deaminase protein-coding chr22-643 chr22 29369453 29369663 + 12.5 0.000 intron (NM_001166019, intron 1 of 20) intron (NM_001166019, intron 1 of 20) 19012 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr2-5373 chr2 98013649 98013859 + 12.5 0.000 Intergenic Intergenic -17806 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr9-1863 chr9 71678036 71678246 + 12.5 0.000 Intergenic Intergenic 90372 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr3-2974 chr3 77311409 77311619 + 12.5 0.000 intron (NM_001290039, intron 2 of 26) intron (NM_001290039, intron 2 of 26) 213502 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr12-3074 chr12 9835763 9835973 + 12.5 0.000 intron (NM_001366534, intron 3 of 3) HERVH-int|LTR|ERV1 8387 NM_001291822 51348 Hs.183125 NM_016523 ENSG00000150045 KLRF1 CLEC5C|NKp80 killer cell lectin like receptor F1 protein-coding chr19-1670 chr19 1622105 1622315 + 12.5 0.000 exon (NM_001351778, exon 10 of 20) exon (NM_001351778, exon 10 of 20) -16748 NM_006830 10975 Hs.8372 NM_006830 ENSG00000127540 UQCR11 0710008D09Rik|QCR10|UQCR ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding chr13-1131 chr13 27264286 27264496 + 12.5 0.000 Intergenic Intergenic -5936 NM_206827 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr17-1239 chr17 82664174 82664384 + 12.5 0.000 intron (NM_006822, intron 2 of 5) intron (NM_006822, intron 2 of 5) 4028 NR_039751 100616196 NR_039751 ENSG00000266107 MIR4525 - microRNA 4525 ncRNA chr11-6132 chr11 40394258 40394468 + 12.5 0.000 intron (NM_020929, intron 2 of 4) intron (NM_020929, intron 2 of 4) -101233 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr11-5472 chr11 75627200 75627410 + 12.5 0.000 intron (NM_207577, intron 1 of 2) intron (NM_207577, intron 1 of 2) 41129 NM_033063 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr8-1142 chr8 140626957 140627167 + 12.5 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 8571 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr12-2685 chr12 79472500 79472710 + 12.5 0.000 Intergenic SATR1|Satellite|Satellite 53348 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr5-1988 chr5 168342571 168342781 + 12.5 0.000 intron (NM_001161661, intron 1 of 22) intron (NM_001161661, intron 1 of 22) 51031 NM_001161661 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr11-6816 chr11 93883781 93883991 + 12.5 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -33268 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr12-5374 chr12 119911144 119911354 + 12.5 0.000 Intergenic MER33|DNA|hAT-Charlie -33929 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr16-1566 chr16 85361650 85361860 + 12.5 0.000 Intergenic Intergenic -55430 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr15-3470 chr15 94664177 94664387 + 12.5 0.000 Intergenic Intergenic -191081 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr13-2245 chr13 25407757 25407967 + 12.5 0.000 intron (NM_016529, intron 1 of 36) intron (NM_016529, intron 1 of 36) 35888 NM_016529 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr3-2014 chr3 34864101 34864311 + 12.5 0.000 Intergenic Intergenic 529817 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr12-912 chr12 22101938 22102148 + 12.5 0.000 Intergenic L1PREC2|LINE|L1 55825 NM_018686 55907 Hs.311346 NM_018686 ENSG00000111726 CMAS CSS cytidine monophosphate N-acetylneuraminic acid synthetase protein-coding chr2-2553 chr2 217393676 217393886 + 12.5 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 111048 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr10-2100 chr10 124751690 124751900 + 12.5 0.000 Intergenic Intergenic -7417 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr3-4622 chr3 13579209 13579419 + 12.5 0.000 intron (NM_001004019, intron 2 of 17) Charlie1|DNA|hAT-Charlie 10574 NM_001165035 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr10-2336 chr10 69507878 69508088 + 12.5 0.000 TTS (NR_147091) TTS (NR_147091) 56516 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr7-4183 chr7 125889504 125889714 + 12.5 0.000 Intergenic AluSx1|SINE|Alu -625318 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr1-2506 chr1 203463900 203464110 + 12.5 0.000 Intergenic Intergenic -11801 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr5-1769 chr5 16690411 16690621 + 12.5 0.000 intron (NM_012334, intron 27 of 40) intron (NM_012334, intron 27 of 40) -73458 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr22-1082 chr22 27603834 27604044 + 12.5 0.000 Intergenic Intergenic 197817 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr11-4018 chr11 8293153 8293363 + 12.5 0.000 Intergenic L2a|LINE|L2 -24471 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr7-4727 chr7 54774286 54774496 + 12.5 0.000 intron (NR_110040, intron 1 of 2) intron (NR_110040, intron 1 of 2) 15078 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr20-846 chr20 37276632 37276842 + 12.5 0.000 Intergenic Intergenic -12918 NM_001003897 63905 Hs.6126 NM_022077 ENSG00000101363 MANBAL - mannosidase beta like protein-coding chr6-4766 chr6 73430173 73430383 + 12.5 0.000 intron (NM_138441, intron 3 of 4) L1M5|LINE|L1 22019 NM_138441 115004 Hs.658405 NM_138441 ENSG00000164430 CGAS C6orf150|MB21D1|h-cGAS cyclic GMP-AMP synthase protein-coding chr2-6048 chr2 121634302 121634512 + 12.5 0.000 intron (NM_015282, intron 1 of 38) intron (NM_015282, intron 1 of 38) 15055 NM_001142274 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding chr14-1483 chr14 30776833 30777043 + 12.5 0.000 Intergenic L2c|LINE|L2 -97597 NM_001347720 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr9-1886 chr9 112332808 112333018 + 12.5 0.000 5' UTR (NM_001244898, exon 1 of 14) 5' UTR (NM_001244898, exon 1 of 14) 113 NM_001244898 9991 Hs.269988 NM_005156 ENSG00000119314 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding chr3-6286 chr3 72807009 72807219 + 12.5 0.000 intron (NM_018130, intron 9 of 10) intron (NM_018130, intron 9 of 10) 41331 NM_018130 55164 Hs.606584 NM_018130 ENSG00000144736 SHQ1 GRIM-1|Shq1p SHQ1, H/ACA ribonucleoprotein assembly factor protein-coding chr11-1706 chr11 72685324 72685534 + 12.5 0.000 non-coding (NR_161388, exon 30 of 30) non-coding (NR_161388, exon 30 of 30) -11007 NM_002599 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr7-2099 chr7 5194052 5194262 + 12.5 0.000 intron (NM_001278299, intron 2 of 12) intron (NM_001278299, intron 2 of 12) 3924 NM_001278299 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr2-3271 chr2 20494420 20494630 + 12.5 0.000 intron (NR_157978, intron 1 of 3) intron (NR_157978, intron 1 of 3) 6999 NR_157978 107985856 NR_157978 LOC107985856 - uncharacterized LOC107985856 ncRNA chr5-3292 chr5 118380064 118380274 + 12.5 0.000 intron (NR_104610, intron 9 of 9) intron (NR_104610, intron 9 of 9) 97595 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr5-5140 chr5 105319588 105319798 + 12.5 0.000 Intergenic MER90a|LTR|ERV1 220219 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr9-2092 chr9 83885585 83885795 + 12.5 0.000 intron (NM_001271928, intron 9 of 15) AluJb|SINE|Alu 35742 NM_001354069 55582 Hs.697514 NM_017576 ENSG00000165115 KIF27 - kinesin family member 27 protein-coding chr12-3741 chr12 32768967 32769177 + 12.5 0.000 Intergenic Intergenic -13175 NM_001040436 51067 Hs.505231 NM_015936 ENSG00000139131 YARS2 CGI-04|MLASA2|MT-TYRRS|TYRRS tyrosyl-tRNA synthetase 2 protein-coding chr9-4421 chr9 7791659 7791869 + 12.5 0.000 Intergenic LTR18B|LTR|ERVL 8014 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr7-5784 chr7 77996065 77996275 + 12.5 0.000 Intergenic MER112|DNA|hAT-Charlie 156040 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr11-7407 chr11 92510194 92510404 + 12.5 0.000 intron (NM_001008781, intron 1 of 24) intron (NM_001008781, intron 1 of 24) 158203 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr1-4367 chr1 147579575 147579785 + 12.5 0.000 intron (NM_004326, intron 1 of 9) intron (NM_004326, intron 1 of 9) 38179 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS BCL9 transcription coactivator protein-coding chr18-1888 chr18 28856341 28856551 + 12.5 0.000 Intergenic Intergenic -679316 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr7-5377 chr7 31958339 31958549 + 12.5 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 111963 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr10-2209 chr10 47461220 47461430 + 12.5 0.000 Intergenic Intergenic 22790 NM_001040084 653145 Hs.535306 NM_001040084 ENSG00000265190 ANXA8 ANX8|CH17-360D5.2 annexin A8 protein-coding chr8-1024 chr8 22088999 22089209 + 12.5 0.000 promoter-TSS (NR_148731) promoter-TSS (NR_148731) -46 NM_001354250 64760 Hs.491223 NM_022749 ENSG00000158863 FAM160B2 RAI16 family with sequence similarity 160 member B2 protein-coding chr9-5678 chr9 123921202 123921412 + 12.5 0.000 intron (NM_001352968, intron 1 of 18) MIRb|SINE|MIR 8819 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr2-7461 chr2 14619311 14619521 + 12.5 0.000 Intergenic Intergenic -13301 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr17-2606 chr17 80942543 80942753 + 12.5 0.000 intron (NM_020761, intron 25 of 33) intron (NM_020761, intron 25 of 33) 28565 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr9-5651 chr9 122164420 122164630 + 12.5 0.000 intron (NM_001286828, intron 1 of 3) L2c|LINE|L2 4617 NM_001286828 254956 Hs.71428 NM_198469 ENSG00000185681 MORN5 C9orf113|C9orf18 MORN repeat containing 5 protein-coding chr17-3954 chr17 62718560 62718770 + 12.5 0.000 intron (NM_001288780, intron 9 of 10) intron (NM_001288780, intron 9 of 10) 12459 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr22-1763 chr22 27107594 27107804 + 12.5 0.000 Intergenic Intergenic -47181 NM_001318329 284898 Hs.350813 NM_001318329 LOC284898 - uncharacterized LOC284898 protein-coding chr6-5393 chr6 153350275 153350485 + 12.5 0.000 Intergenic Intergenic -219098 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr1-6654 chr1 46369417 46369627 + 12.5 0.000 Intergenic L2a|LINE|L2 -24795 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr19-3304 chr19 4432917 4433127 + 12.5 0.000 intron (NM_005483, intron 12 of 14) intron (NM_005483, intron 12 of 14) -12956 NR_039901 100616371 NR_039901 ENSG00000266437 MIR4746 mir-4746 microRNA 4746 ncRNA chr7-3808 chr7 93958315 93958525 + 12.5 0.000 Intergenic Intergenic 36685 NM_004126 2791 Hs.83381 NM_004126 ENSG00000127920 GNG11 GNGT11 G protein subunit gamma 11 protein-coding chr20-3281 chr20 6820624 6820834 + 12.5 0.000 Intergenic Intergenic 53043 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr9-2168 chr9 128215597 128215807 + 12.5 0.000 intron (NM_001288739, intron 1 of 21) intron (NM_001288739, intron 1 of 21) -11480 NM_001131015 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr10-4550 chr10 100479305 100479515 + 12.5 0.000 intron (NM_003393, intron 2 of 5) MIR3|SINE|MIR 16401 NM_003393 7479 Hs.421281 NM_003393 ENSG00000075290 WNT8B - Wnt family member 8B protein-coding chr2-3130 chr2 171469305 171469515 + 12.5 0.000 intron (NM_001164821, intron 9 of 11) intron (NM_001164821, intron 9 of 11) -34607 NM_024770 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr7-5706 chr7 70113547 70113757 + 12.5 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 515177 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr12-3156 chr12 48541813 48542023 + 12.5 0.000 Intergenic MER68C|LTR|ERVL 16286 NM_001005203 341568 Hs.524373 NM_001005203 ENSG00000284723 OR8S1 - olfactory receptor family 8 subfamily S member 1 protein-coding chr2-4340 chr2 239965787 239965997 + 12.5 0.000 intron (NM_001322020, intron 8 of 8) intron (NM_001322020, intron 8 of 8) -22798 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr11-5940 chr11 16383289 16383499 + 12.5 0.000 intron (NM_001367872, intron 3 of 16) Tigger15a|DNA|TcMar-Tigger 19469 NM_001145819 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr8-4594 chr8 130165021 130165231 + 12.5 0.000 intron (NM_001362925, intron 11 of 29) intron (NM_001362925, intron 11 of 29) -80358 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr3-5588 chr3 7921232 7921442 + 12.5 0.000 Intergenic Intergenic 94970 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr22-553 chr22 20299246 20299456 + 12.5 0.000 Intergenic CpG 20709 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr5-3465 chr5 168830127 168830337 + 12.5 0.000 intron (NM_003062, intron 6 of 35) intron (NM_003062, intron 6 of 35) -61977 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr4-3159 chr4 185711557 185711767 + 12.5 0.000 intron (NM_001145672, intron 1 of 20) intron (NM_001145672, intron 1 of 20) -54693 NM_001145674 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr3-3095 chr3 138043669 138043879 + 12.5 0.000 Intergenic Intergenic 33609 NM_016369 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr20-431 chr20 37417321 37417531 + 12.5 0.000 Intergenic Intergenic 71298 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr18-2071 chr18 48308936 48309146 + 12.5 0.000 intron (NM_001371290, intron 5 of 9) intron (NM_001371290, intron 5 of 9) 56740 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr6-3712 chr6 322141 322351 + 12.5 0.000 intron (NR_104473, intron 3 of 5) intron (NR_104473, intron 3 of 5) 30189 NM_001286555 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr6-1053 chr6 8663228 8663438 + 12.5 0.000 intron (NR_038980, intron 3 of 4) intron (NR_038980, intron 3 of 4) 11124 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr16-1690 chr16 89858668 89858878 + 12.5 0.000 intron (NM_032451, intron 8 of 14) intron (NM_032451, intron 8 of 14) -14819 NM_014972 22980 Hs.415342 NM_014972 ENSG00000141002 TCF25 FKSG26|Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 protein-coding chr9-2665 chr9 37290905 37291115 + 12.5 0.000 intron (NM_001289120, intron 2 of 8) Looper|DNA|PiggyBac -131686 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr11-1367 chr11 68987240 68987450 + 12.5 0.000 Intergenic L1MEc|LINE|L1 -6359 NM_198923 116512 Hs.527802 NM_198923 ENSG00000172938 MRGPRD MRGD|TGR7 MAS related GPR family member D protein-coding chr7-1293 chr7 6658869 6659079 + 12.5 0.000 TTS (NM_001278559) TTS (NM_001278559) 21656 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding chr2-4401 chr2 76599864 76600074 + 12.5 0.000 Intergenic LTR41|LTR|ERVL -385996 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr12-1820 chr12 10214586 10214796 + 12.5 0.000 intron (NM_001363598, intron 1 of 2) MIR|SINE|MIR 1814 NM_031412 23710 Hs.524250 NM_031412 ENSG00000139112 GABARAPL1 APG8-LIKE|APG8L|ATG8|ATG8B|ATG8L|GEC1 GABA type A receptor associated protein like 1 protein-coding chr14-2853 chr14 30375369 30375579 + 12.5 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -183649 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr12-3717 chr12 8135972 8136182 + 12.5 0.000 intron (NM_194447, intron 3 of 4) intron (NM_194447, intron 3 of 4) -1225 NR_036440 642559 Hs.646545 NR_036440 ENSG00000235602 POU5F1P3 OCT3|OCT4|OCT4-pg3|OTF-3|OTF3|OTF3L|Oct-3|Oct-4|POU5F1|POU5F1L|POU5FLC12 POU class 5 homeobox 1 pseudogene 3 pseudo chr8-1665 chr8 28703261 28703471 + 12.5 0.000 intron (NR_073468, intron 1 of 4) intron (NR_073468, intron 1 of 4) 1865 NR_073469 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr7-5295 chr7 24699787 24699997 + 12.5 0.000 intron (NM_004403, intron 9 of 9) intron (NM_004403, intron 9 of 9) 57572 NM_001127453 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr7-2051 chr7 120638685 120638895 + 12.5 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 219354 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr3-7884 chr3 128844811 128845021 + 12.5 0.000 Intergenic Intergenic -1892 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr12-1091 chr12 100142340 100142550 + 12.5 0.000 intron (NM_001006947, intron 1 of 12) CpG 429 NM_015054 23074 Hs.572154 NM_015054 ENSG00000111647 UHRF1BP1L SHIP164 UHRF1 binding protein 1 like protein-coding chr7-3907 chr7 119576280 119576490 + 12.5 0.000 Intergenic Intergenic 330990 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr10-2775 chr10 125407866 125408076 + 12.5 0.000 Intergenic L1MA3|LINE|L1 -166400 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr4-652 chr4 150251392 150251602 + 12.5 0.000 intron (NM_001040260, intron 15 of 15) intron (NM_001040260, intron 15 of 15) 173052 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr15-2916 chr15 44122966 44123176 + 12.5 0.000 intron (NM_001286490, intron 1 of 15) AluSq2|SINE|Alu 71375 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr16-4620 chr16 70668265 70668475 + 12.5 0.000 intron (NM_138383, intron 11 of 14) AluSz6|SINE|Alu 17683 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr19-4048 chr19 6409806 6410016 + 12.5 0.000 intron (NM_001321601, intron 1 of 2) L1MC5a|LINE|L1 6600 NR_037505 100500888 NR_037505 ENSG00000284159 MIR3940 mir-3940 microRNA 3940 ncRNA chr4-1755 chr4 139172176 139172386 + 12.5 0.000 intron (NM_001371324, intron 1 of 10) Tigger7|DNA|TcMar-Tigger 4937 NM_001371338 chr7-3264 chr7 5824233 5824443 + 12.5 0.000 intron (NR_023382, intron 1 of 6) intron (NR_023382, intron 1 of 6) 1178 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr11-3519 chr11 2695941 2696151 + 12.5 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 3952 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr9-2595 chr9 2293366 2293576 + 12.5 0.000 Intergenic Intergenic 135015 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr5-2846 chr5 67307063 67307273 + 12.5 0.000 Intergenic Intergenic -110369 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr2-4605 chr2 120641659 120641869 + 12.5 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -94104 NM_001371271 chr14-2081 chr14 70980961 70981171 + 12.5 0.000 intron (NM_001308160, intron 6 of 33) MIR|SINE|MIR 73607 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr2-8319 chr2 107101169 107101379 + 12.5 0.000 Intergenic Intergenic -214165 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr7-3167 chr7 93923940 93924150 + 12.5 0.000 intron (NM_004126, intron 1 of 1) MIR3|SINE|MIR 2310 NM_004126 2791 Hs.83381 NM_004126 ENSG00000127920 GNG11 GNGT11 G protein subunit gamma 11 protein-coding chr3-8571 chr3 154318012 154318222 + 12.5 0.000 intron (NM_001114397, intron 1 of 24) intron (NM_001114397, intron 1 of 24) 6370 NM_020865 170506 Hs.446270 NM_020865 ENSG00000174953 DHX36 DDX36|G4R1|MLEL1|RHAU DEAH-box helicase 36 protein-coding chr12-3949 chr12 6069372 6069582 + 12.5 0.000 intron (NM_000552, intron 10 of 51) intron (NM_000552, intron 10 of 51) -29294 NR_145989 109729112 NR_145989 SNORA120 - small nucleolar RNA, H/ACA box 120 snoRNA chr1-6955 chr1 156662450 156662660 + 12.5 0.000 Intergenic Intergenic 14852 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr5-3364 chr5 138132524 138132734 + 12.5 0.000 intron (NM_003551, intron 2 of 5) intron (NM_003551, intron 2 of 5) 6799 NM_003551 8382 Hs.730856 NM_003551 ENSG00000112981 NME5 NM23-H5|NM23H5|RSPH23 NME/NM23 family member 5 protein-coding chr3-3198 chr3 188264143 188264353 + 12.5 0.000 intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 38843 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr9-2615 chr9 15523037 15523247 + 12.5 0.000 Intergenic L1MD1|LINE|L1 -12123 NM_001128217 11168 Hs.658434 NM_021144 ENSG00000164985 PSIP1 DFS70|LEDGF|PAIP|PSIP2|p52|p75 PC4 and SFRS1 interacting protein 1 protein-coding chr1-3101 chr1 35146358 35146568 + 12.5 0.000 Intergenic HERV3-int|LTR|ERV1 46682 NR_136702 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr11-1403 chr11 11842511 11842721 + 12.5 0.000 intron (NM_017944, intron 1 of 26) intron (NM_017944, intron 1 of 26) 1193 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr17-2254 chr17 16031221 16031431 + 12.5 0.000 3' UTR (NM_006311, exon 46 of 46) 3' UTR (NM_006311, exon 46 of 46) 31502 NM_001271420 54902 Hs.462316 NM_017775 ENSG00000011295 TTC19 2010204O13Rik|MC3DN2 tetratricopeptide repeat domain 19 protein-coding chr10-2673 chr10 98956882 98957092 + 12.5 0.000 intron (NM_021828, intron 3 of 11) L2b|LINE|L2 -32419 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr2-8504 chr2 128441213 128441423 + 12.5 0.000 Intergenic Intergenic -122450 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr8-1302 chr8 97148189 97148399 + 12.5 0.000 intron (NR_125390, intron 2 of 2) MER76|LTR|ERVL 129634 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr2-3709 chr2 222451407 222451617 + 12.5 0.000 intron (NM_001320833, intron 2 of 5) intron (NM_001320833, intron 2 of 5) 26969 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr14-901 chr14 55780692 55780902 + 12.5 0.000 TTS (NR_026797) TTS (NR_026797) 14552 NR_004844 645683 Hs.663461 NR_004844 ENSG00000177350 RPL13AP3 RPL13A_11_1370 ribosomal protein L13a pseudogene 3 pseudo chr5-1602 chr5 35136509 35136719 + 12.5 0.000 intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) -18492 NM_001204314 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chrX-1001 chrX 39484723 39484933 + 12.5 0.000 Intergenic Intergenic -93054 NR_110385 101927449 Hs.553988 NR_110385 ENSG00000236747 LINC01282 - long intergenic non-protein coding RNA 1282 ncRNA chr4-5073 chr4 145897863 145898073 + 12.5 0.000 intron (NM_178835, intron 2 of 14) AluSz6|SINE|Alu 40855 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr3-4399 chr3 196222698 196222908 + 12.5 0.000 intron (NM_152672, intron 2 of 8) MER103C|DNA|hAT-Charlie 6269 NM_152672 200931 Hs.630585 NM_152672 ENSG00000163959 SLC51A OSTA|OSTalpha solute carrier family 51 alpha subunit protein-coding chr1-2957 chr1 100038598 100038808 + 12.5 0.000 intron (NM_033055, intron 1 of 11) CpG 608 NM_033055 64645 Hs.124156 NM_033055 ENSG00000156875 MFSD14A HIAT1 major facilitator superfamily domain containing 14A protein-coding chr17-3457 chr17 39486480 39486690 + 12.5 0.000 intron (NM_015083, intron 2 of 13) L3b|LINE|CR1 25099 NM_015083 51755 Hs.345028 NM_015083 ENSG00000167258 CDK12 CRK7|CRKR|CRKRS cyclin dependent kinase 12 protein-coding chr15-1058 chr15 67198364 67198574 + 12.5 0.000 Intergenic MER5A|DNA|hAT-Charlie 32314 NM_001145104 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr6-3914 chr6 72677930 72678140 + 12.5 0.000 intron (NR_120503, intron 3 of 3) intron (NR_120503, intron 3 of 3) 47540 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr8-1720 chr8 133552578 133552788 + 12.5 0.000 intron (NM_003033, intron 1 of 8) intron (NM_003033, intron 1 of 8) 19204 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr13-2579 chr13 70201764 70201974 + 12.5 0.000 Intergenic Intergenic -93376 NM_001286725 57626 Hs.508201 NM_020866 ENSG00000150361 KLHL1 MRP2 kelch like family member 1 protein-coding chr11-5176 chr11 7144002 7144212 + 12.5 0.000 Intergenic L3|LINE|CR1 55109 NM_014469 27288 Hs.121605 NM_014469 ENSG00000170748 RBMXL2 HNRNPG-T|HNRNPGT|HNRPGT RBMX like 2 protein-coding chr12-2052 chr12 101945312 101945522 + 12.5 0.000 Intergenic Intergenic 67837 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr11-3174 chr11 62786470 62786680 + 12.5 0.000 promoter-TSS (NM_001363599) promoter-TSS (NM_001363599) -827 NM_199337 374395 Hs.381134 NM_199337 ENSG00000185475 TMEM179B - transmembrane protein 179B protein-coding chr2-3482 chr2 186275056 186275266 + 12.5 0.000 Intergenic MER4CL34|LTR|ERV1 -188844 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr11-1943 chr11 112025750 112025960 + 12.5 0.000 intron (NM_001931, intron 1 of 13) intron (NM_001931, intron 1 of 13) 1041 NM_001931 1737 Hs.335551 NM_001931 ENSG00000150768 DLAT DLTA|E2|PDC-E2|PDCE2 dihydrolipoamide S-acetyltransferase protein-coding chr7-1965 chr7 116528123 116528333 + 12.5 0.000 intron (NM_001753, intron 2 of 2) intron (NM_001753, intron 2 of 2) 1866 NM_001172897 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr13-987 chr13 45333859 45334069 + 12.5 0.000 3' UTR (NM_001286272, exon 6 of 6) 3' UTR (NM_001286272, exon 6 of 6) 2483 NR_145985 109616966 NR_145726 ENSG00000253051 SNORA31B - small nucleolar RNA, H/ACA box 31B snoRNA chr17-646 chr17 44608286 44608496 + 12.5 0.000 Intergenic Intergenic 41958 NR_110661 101927017 Hs.560554 NR_110661 ENSG00000266979 LINC01180 - long intergenic non-protein coding RNA 1180 ncRNA chr2-3851 chr2 34209114 34209324 + 12.5 0.000 intron (NR_126403, intron 4 of 5) L1PA13|LINE|L1 141993 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr12-2733 chr12 11724364 11724574 + 12.5 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 74615 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr10-1707 chr10 59610984 59611194 + 12.5 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat 98802 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr8-4505 chr8 119852162 119852372 + 12.5 0.000 intron (NM_024094, intron 2 of 8) intron (NM_024094, intron 2 of 8) 3627 NM_024094 79075 Hs.315167 NM_024094 ENSG00000136982 DSCC1 DCC1 DNA replication and sister chromatid cohesion 1 protein-coding chr18-761 chr18 9960927 9961137 + 12.5 0.000 Intergenic Intergenic 47016 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr12-3521 chr12 131389512 131389722 + 12.5 0.000 Intergenic Intergenic 42147 NR_103736 338797 Hs.592007 NM_001025466 LINC02370 - long intergenic non-protein coding RNA 2370 ncRNA chr4-568 chr4 178102591 178102801 + 12.5 0.000 Intergenic Intergenic -194760 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chrX-1734 chrX 38754068 38754278 + 12.5 0.000 Intergenic Intergenic -47259 NM_021242 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr6-1961 chr6 138293457 138293667 + 12.5 0.000 intron (NM_020340, intron 19 of 33) intron (NM_020340, intron 19 of 33) -75072 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr15-1542 chr15 65824229 65824439 + 12.5 0.000 Intergenic Intergenic -32041 NM_001320835 10260 Hs.654567 NM_005848 ENSG00000174485 DENND4A IRLB|MYCPBP DENN domain containing 4A protein-coding chr8-4536 chr8 123548322 123548532 + 12.5 0.000 Intergenic Intergenic -7221 NM_058229 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr2-2176 chr2 18762785 18762995 + 12.5 0.000 Intergenic Intergenic -173310 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr16-2866 chr16 87881521 87881731 + 12.5 0.000 TTS (NM_001367225) TTS (NM_001367225) -12119 NM_003486 8140 Hs.513797 NM_003486 ENSG00000103257 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16 solute carrier family 7 member 5 protein-coding chr10-2402 chr10 124944923 124945133 + 12.5 0.000 intron (NM_017580, intron 1 of 8) intron (NM_017580, intron 1 of 8) 2905 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr1-8595 chr1 182150950 182151160 + 12.5 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -89343 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr3-2707 chr3 64340774 64340984 + 12.5 0.000 Intergenic Intergenic -72706 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr6-4879 chr6 89952727 89952937 + 12.5 0.000 intron (NM_021813, intron 6 of 8) intron (NM_021813, intron 6 of 8) 58363 NM_032602 84694 Hs.334499 NM_032602 ENSG00000135355 GJA10 CX62 gap junction protein alpha 10 protein-coding chr1-8455 chr1 109752450 109752660 + 12.5 0.000 intron (NM_133181, intron 14 of 18) intron (NM_133181, intron 14 of 18) 11368 NM_133181 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr11-4563 chr11 124028463 124028673 + 12.5 0.000 Intergenic Intergenic -1055 NM_001004464 219869 Hs.553635 NM_001004464 ENSG00000234560 OR10G8 OR11-274|OR11-282 olfactory receptor family 10 subfamily G member 8 protein-coding chr17-1061 chr17 55421894 55422104 + 12.5 0.000 promoter-TSS (NM_012329) promoter-TSS (NM_012329) -164 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr10-1172 chr10 36023937 36024147 + 12.5 0.000 Intergenic Intergenic 245740 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr10-2575 chr10 71476996 71477206 + 12.5 0.000 intron (NM_052836, intron 3 of 12) intron (NM_052836, intron 3 of 12) 34819 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr2-8942 chr2 186772706 186772916 + 12.5 0.000 Intergenic L1PBa|LINE|L1 76359 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr22-692 chr22 19527301 19527511 + 12.5 0.000 Intergenic Intergenic -2069 NM_001363067 7122 Hs.505337 NM_003277 ENSG00000184113 CLDN5 AWAL|BEC1|CPETRL1|TMDVCF|TMVCF claudin 5 protein-coding chr14-661 chr14 59190010 59190220 + 12.5 0.000 intron (NM_001270520, intron 1 of 24) intron (NM_001270520, intron 1 of 24) 1448 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chrX-2568 chrX 102744801 102745011 + 12.5 0.000 intron (NR_146584, intron 8 of 18) L2b|LINE|L2 -1073 NM_001142530 80823 Hs.4276 NM_030639 ENSG00000198908 BHLHB9 GASP3|p60TRP basic helix-loop-helix family member b9 protein-coding chr1-3178 chr1 98323948 98324158 + 12.5 0.000 Intergenic MLT2F|LTR|ERVL 113342 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr6-5555 chr6 169653463 169653673 + 12.5 0.000 intron (NM_182552, intron 13 of 25) intron (NM_182552, intron 13 of 25) 48461 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr14-1025 chr14 54776720 54776930 + 12.5 0.000 intron (NM_015589, intron 10 of 11) intron (NM_015589, intron 10 of 11) 21992 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr5-1480 chr5 96384502 96384712 + 12.5 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) 47552 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr2-5385 chr2 101527263 101527473 + 12.5 0.000 Intergenic HAL1|LINE|L1 -52256 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr3-2616 chr3 177835105 177835315 + 12.5 0.000 intron (NR_110826, intron 1 of 2) intron (NR_110826, intron 1 of 2) 18345 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr1-5717 chr1 66981849 66982059 + 12.5 0.000 intron (NM_001077700, intron 13 of 13) intron (NM_001077700, intron 13 of 13) 51698 NM_001077701 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr2-3196 chr2 216857075 216857285 + 12.5 0.000 Intergenic Intergenic 2884 NM_003284 7141 Hs.3017 NM_003284 ENSG00000118245 TNP1 TP1 transition protein 1 protein-coding chr19-5607 chr19 3141121 3141331 + 12.5 0.000 TTS (NR_110670) TTS (NR_110670) 5193 NM_002068 2769 Hs.73797 NM_002068 ENSG00000060558 GNA15 GNA16 G protein subunit alpha 15 protein-coding chr14-1963 chr14 35413318 35413528 + 12.5 0.000 Intergenic Intergenic -8669 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr21-909 chr21 27645318 27645528 + 12.5 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -76956 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr8-782 chr8 61520645 61520855 + 12.5 0.000 intron (NM_004318, intron 22 of 24) intron (NM_004318, intron 22 of 24) 169061 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr1-6978 chr1 162612569 162612779 + 12.5 0.000 Intergenic Intergenic -18189 NM_001354983 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr3-4765 chr3 104569823 104570033 + 12.5 0.000 Intergenic Intergenic -796785 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr14-1393 chr14 51682680 51682890 + 12.5 0.000 intron (NM_001267046, intron 1 of 13) MLT1K|LTR|ERVL-MaLR 30875 NM_152330 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr20-552 chr20 25623793 25624003 + 12.5 0.000 promoter-TSS (NR_126466) promoter-TSS (NR_126466) 116 NM_152667 140838 Hs.143137 NM_152667 ENSG00000170191 NANP C20orf147|HDHD4|dJ694B14.3 N-acetylneuraminic acid phosphatase protein-coding chr15-696 chr15 48627362 48627572 + 12.5 0.000 intron (NM_000138, intron 2 of 65) Tigger19b|DNA|TcMar-Tigger 18321 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr19-1004 chr19 550155 550365 + 12.5 0.000 TTS (NM_005317) TTS (NM_005317) 6207 NM_005317 3004 Hs.465511 NM_005317 ENSG00000197540 GZMM LMET1|MET1 granzyme M protein-coding chr5-1909 chr5 169416923 169417133 + 12.5 0.000 Intergenic Intergenic -115889 NM_003062 6586 Hs.552087 NM_003062 ENSG00000184347 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit guidance ligand 3 protein-coding chr10-5440 chr10 78306522 78306732 + 12.5 0.000 Intergenic L2|LINE|L2 39285 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr3-2886 chr3 48023331 48023541 + 12.5 0.000 intron (NM_002375, intron 1 of 18) intron (NM_002375, intron 1 of 18) 65412 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr11-3177 chr11 63455687 63455897 + 12.5 0.000 Intergenic HERVH-int|LTR|ERV1 35375 NM_001146729 117245 Hs.410316 NM_054108 ENSG00000168004 PLAAT5 HRASLS5|HRLP5|HRSL5|PLAAT-5|RLP1|iNAT phospholipase A and acyltransferase 5 protein-coding chr5-2165 chr5 111929891 111930101 + 12.5 0.000 intron (NR_046678, intron 1 of 3) intron (NR_046678, intron 1 of 3) 17488 NR_046678 100873948 Hs.147716 NR_046678 ENSG00000250095 NREP-AS1 - NREP antisense RNA 1 ncRNA chr15-1402 chr15 41999594 41999804 + 12.5 0.000 TTS (NR_120334) TTS (NR_120334) 26936 NR_120334 101928388 Hs.738043 NR_120334 ENSG00000246740 PLA2G4E-AS1 - PLA2G4E antisense RNA 1 ncRNA chr10-3007 chr10 100670260 100670470 + 12.5 0.000 Intergenic Intergenic -65031 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr11-3014 chr11 682640 682850 + 12.5 0.000 intron (NM_001367390, intron 6 of 11) L1M4b|LINE|L1 -12846 NM_001042463 283232 Hs.448664 NM_174940 ENSG00000177042 TMEM80 - transmembrane protein 80 protein-coding chr5-3698 chr5 7916277 7916487 + 12.5 0.000 Intergenic Intergenic 47234 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr17-2152 chr17 43468381 43468591 + 12.5 0.000 Intergenic Intergenic -15379 NR_136225 1659 Hs.463105 NM_004941 ENSG00000067596 DHX8 DDX8|Dhr2|HRH1|PRP22|PRPF22 DEAH-box helicase 8 protein-coding chr20-1134 chr20 37269692 37269902 + 12.5 0.000 Intergenic Intergenic -12889 NM_001184731 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chr22-1715 chr22 19143967 19144177 + 12.5 0.000 intron (NM_022719, intron 1 of 9) intron (NM_022719, intron 1 of 9) 579 NR_134304 8220 Hs.517407 NM_022719 ENSG00000100056 ESS2 DGCR13|DGCR14|DGS-H|DGS-I|DGSH|DGSI|ES2|ESS-2|Es2el|bis1 ess-2 splicing factor homolog protein-coding chr5-2739 chr5 135329948 135330158 + 12.5 0.000 intron (NR_161235, intron 3 of 5) intron (NR_161235, intron 3 of 5) 69185 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr20-443 chr20 16580334 16580544 + 12.5 0.000 Intergenic Intergenic -6991 NM_024704 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr4-4880 chr4 116000545 116000755 + 12.5 0.000 Intergenic Intergenic -299075 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr9-3783 chr9 126582298 126582508 + 12.5 0.000 Intergenic Intergenic -32040 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr3-712 chr3 184314846 184315056 + 12.5 0.000 promoter-TSS (NM_182917) promoter-TSS (NM_182917) -213 NM_182917 1981 Hs.433750 NM_004953 ENSG00000114867 EIF4G1 EIF-4G1|EIF4F|EIF4G|EIF4GI|P220|PARK18 eukaryotic translation initiation factor 4 gamma 1 protein-coding chr10-2444 chr10 6779166 6779376 + 12.5 0.000 promoter-TSS (NR_108074) promoter-TSS (NR_108074) -91 NR_108074 100652997 Hs.255086 NR_108074 ENSG00000281186 LINC00706 - long intergenic non-protein coding RNA 706 ncRNA chr4-3309 chr4 166767653 166767863 + 12.5 0.000 intron (NM_001204356, intron 6 of 9) L1PA5|LINE|L1 466668 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr1-2477 chr1 94783389 94783599 + 12.5 0.000 intron (NR_160783, intron 1 of 3) intron (NR_160783, intron 1 of 3) 36738 NR_160784 101928079 Hs.596857 NR_104131 ENSG00000224081 SLC44A3-AS1 LINC01057|XLOC_000303 SLC44A3 antisense RNA 1 ncRNA chr18-833 chr18 10729588 10729798 + 12.5 0.000 intron (NM_022068, intron 33 of 51) L1ME3G|LINE|L1 29956 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr8-1485 chr8 38381144 38381354 + 12.5 0.000 intron (NM_023034, intron 1 of 23) intron (NM_023034, intron 1 of 23) 1022 NM_023034 54904 Hs.434966 NM_017778 ENSG00000147548 NSD3 KMT3F|KMT3G|WHISTLE|WHSC1L1|pp14328 nuclear receptor binding SET domain protein 3 protein-coding chr1-3973 chr1 154352650 154352860 + 12.5 0.000 Intergenic Intergenic 23957 NM_001367934 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr11-1682 chr11 57293009 57293219 + 12.5 0.000 Intergenic Intergenic 31838 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr7-6248 chr7 134424784 134424994 + 12.5 0.000 Intergenic LTR81B|LTR|Gypsy 34211 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr11-4141 chr11 45252898 45253108 + 12.5 0.000 intron (NM_020826, intron 3 of 5) intron (NM_020826, intron 3 of 5) 33338 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr22-1380 chr22 36576988 36577198 + 12.5 0.000 intron (NM_006078, intron 2 of 3) MIR|SINE|MIR -47927 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr4-1555 chr4 762641 762851 + 12.5 0.000 intron (NM_001317836, intron 10 of 11) intron (NM_001317836, intron 10 of 11) 19102 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr2-4213 chr2 208440944 208441154 + 12.5 0.000 intron (NM_005048, intron 4 of 12) intron (NM_005048, intron 4 of 12) 34219 NM_005048 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr9-2511 chr9 110029440 110029650 + 12.5 0.000 intron (NM_147150, intron 7 of 9) intron (NM_147150, intron 7 of 9) -19053 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr5-4469 chr5 7852876 7853086 + 12.5 0.000 Intergenic Intergenic -1848 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding chr12-1800 chr12 131883678 131883888 + 12.5 0.000 Intergenic L1ME2|LINE|L1 -10839 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr20-910 chr20 50478366 50478576 + 12.5 0.000 Intergenic LTR1|LTR|ERV1 -31850 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr2-2614 chr2 45745295 45745505 + 12.5 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 93725 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr20-1666 chr20 33012225 33012435 + 12.5 0.000 intron (NM_025227, intron 3 of 15) intron (NM_025227, intron 3 of 15) 4626 NM_025227 80341 Hs.257045 NM_025227 ENSG00000078898 BPIFB2 BPIL1|C20orf184|LPLUNC2|RYSR|dJ726C3.2 BPI fold containing family B member 2 protein-coding chr10-5914 chr10 119516403 119516613 + 12.5 0.000 intron (NM_001005339, intron 3 of 4) MIRb|SINE|MIR 20025 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr5-1981 chr5 149445978 149446188 + 12.5 0.000 Intergenic Intergenic 15437 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr11-3303 chr11 99422684 99422894 + 12.5 0.000 intron (NM_001243271, intron 2 of 20) L2a|LINE|L2 -133356 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr3-4140 chr3 122497503 122497713 + 12.5 0.000 intron (NR_026698, intron 1 of 14) L1MB8|LINE|L1 17331 NR_026698 3836 Hs.161008 NM_002264 ENSG00000114030 KPNA1 IPOA5|NPI-1|RCH2|SRP1 karyopherin subunit alpha 1 protein-coding chrX-391 chrX 129833709 129833919 + 12.5 0.000 intron (NM_016032, intron 3 of 10) intron (NM_016032, intron 3 of 10) 9785 NM_001008222 51114 Hs.193566 NM_016032 ENSG00000188706 ZDHHC9 CGI89|CXorf11|DHHC9|MMSA1|MRXSZ|ZDHHC10|ZNF379|ZNF380 zinc finger DHHC-type containing 9 protein-coding chr4-4209 chr4 15369041 15369251 + 12.5 0.000 intron (NM_001135170, intron 1 of 2) intron (NM_001135170, intron 1 of 2) -5405 NM_001135171 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr19-1538 chr19 28883376 28883586 + 12.5 0.000 Intergenic Intergenic -81650 NR_027318 148145 Hs.112651 NR_027318 ENSG00000267339 LINC00906 - long intergenic non-protein coding RNA 906 ncRNA chr13-2007 chr13 35379194 35379404 + 12.5 0.000 intron (NM_015678, intron 38 of 57) L1ME3|LINE|L1 97390 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr2-2249 chr2 232365672 232365882 + 12.5 0.000 Intergenic Intergenic -12974 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr11-2613 chr11 2193844 2194054 + 12.5 0.000 Intergenic Intergenic 20886 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr4-1395 chr4 852070 852280 + 12.5 0.000 intron (NM_005255, intron 24 of 27) intron (NM_005255, intron 24 of 27) -26046 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr2-3946 chr2 64035478 64035688 + 12.5 0.000 Intergenic Intergenic -16155 NM_001005739 51542 Hs.48499 NM_016516 ENSG00000143952 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L VPS54 subunit of GARP complex protein-coding chr5-3195 chr5 79367417 79367627 + 12.5 0.000 Intergenic Intergenic 131391 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr1-2298 chr1 27349755 27349965 + 12.5 0.000 intron (NM_032872, intron 8 of 14) CpG-732 7838 NM_032872 84958 Hs.469175 NM_032872 ENSG00000142765 SYTL1 JFC1|SLP1 synaptotagmin like 1 protein-coding chr2-6495 chr2 177246138 177246348 + 12.5 0.000 intron (NM_001313903, intron 1 of 4) intron (NM_001313903, intron 1 of 4) 9767 NR_036075 100422824 NR_036075 ENSG00000265396 MIR3128 mir-3128 microRNA 3128 ncRNA chr13-1203 chr13 50866920 50867130 + 12.5 0.000 Intergenic L1M4a1|LINE|L1 -23086 NM_001306135 220107 Hs.673860 NM_198989 ENSG00000186047 DLEU7 - deleted in lymphocytic leukemia 7 protein-coding chr3-4081 chr3 100760065 100760275 + 12.5 0.000 intron (NM_001349332, intron 31 of 35) intron (NM_001349332, intron 31 of 35) 50628 NM_001195478 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr1-8561 chr1 169550294 169550504 + 12.5 0.000 intron (NM_000130, intron 9 of 24) intron (NM_000130, intron 9 of 24) 36132 NM_000130 2153 Hs.30054 NM_000130 ENSG00000198734 F5 FVL|PCCF|RPRGL1|THPH2 coagulation factor V protein-coding chr2-8345 chr2 109099535 109099745 + 12.5 0.000 Intergenic MER72|LTR|ERV1 -29565 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr9-4935 chr9 13746346 13746556 + 12.5 0.000 Intergenic Intergenic -181520 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr21-1050 chr21 27631532 27631742 + 12.5 0.000 Intergenic Intergenic -90742 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr1-5181 chr1 170792013 170792223 + 12.5 0.000 Intergenic Intergenic 127987 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr10-5174 chr10 58672963 58673173 + 12.5 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -41947 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr2-4455 chr2 216013533 216013743 + 12.5 0.000 promoter-TSS (NM_018000) promoter-TSS (NM_018000) -87 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr7-2873 chr7 116577062 116577272 + 12.5 0.000 intron (NR_120506, intron 2 of 4) intron (NR_120506, intron 2 of 4) 37653 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr10-3489 chr10 67951115 67951325 + 12.5 0.000 intron (NM_022079, intron 20 of 25) intron (NM_022079, intron 20 of 25) 59663 NR_131184 100009667 NR_131184 POU5F1P5 Oct4-pg5 POU class 5 homeobox 1 pseudogene 5 pseudo chr17-5445 chr17 39530977 39531187 + 12.5 0.000 exon (NM_016507, exon 14 of 14) exon (NM_016507, exon 14 of 14) 69596 NM_015083 51755 Hs.345028 NM_015083 ENSG00000167258 CDK12 CRK7|CRKR|CRKRS cyclin dependent kinase 12 protein-coding chr10-5665 chr10 98044652 98044862 + 12.5 0.000 Intergenic Intergenic -13929 NM_001206528 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr8-4599 chr8 130312594 130312804 + 12.5 0.000 intron (NM_001362925, intron 3 of 29) MIRb|SINE|MIR -16166 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr10-5093 chr10 46645238 46645448 + 12.5 0.000 intron (NR_027632, intron 1 of 6) intron (NR_027632, intron 1 of 6) 6633 NR_027632 414241 Hs.594331 NM_001098846 ENSG00000165874 SHLD2P1 FAM35B|FAM35BP|FAM35EP|bA38L15.1 shieldin complex subunit 2 pseudogene 1 pseudo chr21-626 chr21 42949467 42949677 + 12.5 0.000 Intergenic HERVE_a-int|LTR|ERV1 1442 NR_049889 100847013 NR_049889 ENSG00000264580 MIR5692B - microRNA 5692b ncRNA chr16-2573 chr16 84687650 84687860 + 12.5 0.000 Intergenic Intergenic -12245 NR_073578 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr8-1972 chr8 71994272 71994482 + 12.5 0.000 intron (NR_033652, intron 4 of 4) intron (NR_033652, intron 4 of 4) 81207 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr1-1120 chr1 44632178 44632388 + 12.5 0.000 intron (NM_001319957, intron 4 of 13) CpG 38773 NR_145816 109623472 NR_145816 SNORD145 - small nucleolar RNA, C/D box 145 snoRNA chr14-1796 chr14 22520366 22520576 + 12.5 0.000 Intergenic Intergenic 36591 NR_146543 105370400 NR_146543 ENSG00000259054 LINC02332 - long intergenic non-protein coding RNA 2332 ncRNA chr2-5328 chr2 83551450 83551660 + 12.5 0.000 Intergenic Intergenic 28741 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr4-2096 chr4 41095815 41096025 + 12.5 0.000 intron (NM_173075, intron 3 of 16) L2c|LINE|L2 118622 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr21-436 chr21 33657252 33657462 + 12.5 0.000 intron (NM_001001132, intron 1 of 29) intron (NM_001001132, intron 1 of 29) 14856 NM_001331010 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr11-3640 chr11 83911120 83911330 + 12.5 0.000 intron (NM_001142700, intron 7 of 19) intron (NM_001142700, intron 7 of 19) -228800 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr8-3400 chr8 65925034 65925244 + 12.5 0.000 Intergenic L1MB7|LINE|L1 -83075 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chr3-2394 chr3 184406008 184406218 + 12.5 0.000 intron (NR_161198, intron 1 of 2) intron (NR_161198, intron 1 of 2) 4576 NR_161199 105374250 Hs.129464 NR_161198 LINC02054 - long intergenic non-protein coding RNA 2054 ncRNA chr9-2254 chr9 86549610 86549820 + 12.5 0.000 Intergenic Intergenic -195305 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr18-150 chr18 79964564 79964774 + 12.5 0.000 promoter-TSS (NM_001136180) promoter-TSS (NM_001136180) 26 NM_001136180 440498 Hs.191582 NM_001136180 ENSG00000226742 HSBP1L1 - heat shock factor binding protein 1 like 1 protein-coding chr3-2853 chr3 32989897 32990107 + 12.5 0.000 Intergenic Intergenic 38358 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr14-1061 chr14 73058880 73059090 + 12.5 0.000 intron (NM_021239, intron 1 of 18) CpG 451 NM_021239 58517 Hs.531106 NM_021239 ENSG00000119707 RBM25 NET52|RED120|RNPC7|S164|Snu71|fSAP94 RNA binding motif protein 25 protein-coding chr15-767 chr15 84588111 84588321 + 12.5 0.000 Intergenic Intergenic -12793 NM_017894 54993 Hs.594023 NM_017894 ENSG00000176371 ZSCAN2 ZFP29|ZNF854 zinc finger and SCAN domain containing 2 protein-coding chr22-887 chr22 50282948 50283158 + 12.5 0.000 exon (NM_012401, exon 17 of 37) exon (NM_012401, exon 17 of 37) -12673 NM_002751 5600 Hs.57732 NM_002751 ENSG00000185386 MAPK11 P38B|P38BETA2|PRKM11|SAPK2|SAPK2B|p38-2|p38Beta mitogen-activated protein kinase 11 protein-coding chr10-1922 chr10 227193 227403 + 12.5 0.000 intron (NM_001370102, intron 4 of 14) intron (NM_001370102, intron 4 of 14) 47304 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr12-4336 chr12 741042 741252 + 12.5 0.000 Intergenic Intergenic -11432 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr12-2307 chr12 122048309 122048519 + 12.5 0.000 intron (NM_001024808, intron 4 of 5) intron (NM_001024808, intron 4 of 5) -14876 NR_135044 100506691 Hs.536336 NR_135044 ENSG00000256546 LOC100506691 - uncharacterized LOC100506691 ncRNA chr19-2146 chr19 5355468 5355678 + 12.5 0.000 Intergenic Intergenic -14761 NM_130854 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr12-3037 chr12 1191927 1192137 + 12.5 0.000 intron (NM_001301248, intron 11 of 18) MIR3|SINE|MIR 164284 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr3-3610 chr3 86560370 86560580 + 12.5 0.000 Intergenic MSTA|LTR|ERVL-MaLR 78532 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr5-4733 chr5 43993675 43993885 + 12.5 0.000 Intergenic Intergenic -390550 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr13-1071 chr13 37306866 37307076 + 12.5 0.000 Intergenic Intergenic 177813 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chr1-2788 chr1 211578970 211579180 + 12.5 0.000 promoter-TSS (NM_021194) promoter-TSS (NM_021194) 86 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr11-7170 chr11 129364185 129364395 + 12.5 0.000 Intergenic CpG -11558 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr14-259 chr14 105186893 105187103 + 12.5 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -5675 NM_001318380 256281 Hs.526432 NM_177533 ENSG00000183828 NUDT14 UGPP|UGPPase nudix hydrolase 14 protein-coding chr1-4527 chr1 41684098 41684308 + 12.5 0.000 intron (NM_001127714, intron 1 of 7) intron (NM_001127714, intron 1 of 7) -199520 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr10-1847 chr10 60782603 60782813 + 12.5 0.000 intron (NM_033379, intron 2 of 6) intron (NM_033379, intron 2 of 6) 4230 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr1-5684 chr1 46267342 46267552 + 12.5 0.000 intron (NM_001142548, intron 9 of 18) intron (NM_001142548, intron 9 of 18) 19684 NM_003579 8438 Hs.642042 NM_003579 ENSG00000085999 RAD54L HR54|RAD54A|hHR54|hRAD54 RAD54 like protein-coding chr2-6664 chr2 11140554 11140764 + 12.5 0.000 intron (NM_182500, intron 2 of 3) L2c|LINE|L2 7531 NM_001371320 chr1-5343 chr1 229625023 229625233 + 12.5 0.000 intron (NM_001025247, intron 1 of 3) intron (NM_001025247, intron 1 of 3) 919 NM_014409 27097 Hs.270621 NM_014409 ENSG00000135801 TAF5L PAF65B TATA-box binding protein associated factor 5 like protein-coding chr3-3509 chr3 15794386 15794596 + 12.5 0.000 intron (NM_001349284, intron 2 of 2) intron (NM_001349284, intron 2 of 2) 3488 NM_001349281 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr5-4141 chr5 88486560 88486770 + 12.5 0.000 Intergenic Intergenic -47575 NR_105021 102546226 Hs.535810 NR_105021 ENSG00000250156 LINC02060 - long intergenic non-protein coding RNA 2060 ncRNA chr4-2013 chr4 2158745 2158955 + 12.5 0.000 intron (NM_181808, intron 14 of 25) intron (NM_181808, intron 14 of 25) 83271 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr11-3661 chr11 118276744 118276954 + 12.5 0.000 Intergenic Intergenic -12313 NM_144765 10205 Hs.116651 NM_005797 ENSG00000149573 MPZL2 DFNB111|EVA|EVA1 myelin protein zero like 2 protein-coding chr13-1349 chr13 48653531 48653741 + 12.5 0.000 promoter-TSS (NM_001308476) promoter-TSS (NM_001308476) -293 NM_001308465 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr7-6339 chr7 147475132 147475342 + 12.5 0.000 intron (NM_014141, intron 9 of 22) L1ME4b|LINE|L1 -97116 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr16-929 chr16 3458530 3458740 + 12.5 0.000 intron (NM_001317095, intron 1 of 5) intron (NM_001317095, intron 1 of 5) 590 NM_001317097 79903 Hs.513296 NM_024845 ENSG00000122390 NAA60 HAT4|NAT15|NatF|hNaa60 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding chr2-8978 chr2 190615434 190615644 + 12.5 0.000 Intergenic MER21C|LTR|ERVL -33356 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr16-2176 chr16 68246490 68246700 + 12.5 0.000 intron (NM_012320, intron 1 of 5) intron (NM_012320, intron 1 of 5) 1222 NM_012320 23659 Hs.632199 NM_012320 ENSG00000103066 PLA2G15 ACS|GXVPLA2|LLPL|LPLA2|LYPLA3 phospholipase A2 group XV protein-coding chr6-4143 chr6 168109895 168110105 + 12.5 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -28443 NR_110312 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr7-5716 chr7 70640406 70640616 + 12.5 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -491633 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr14-3234 chr14 75399686 75399896 + 12.5 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -27933 NM_001135047 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chrX-2523 chrX 97018663 97018873 + 12.5 0.000 intron (NM_007309, intron 17 of 26) L1MC2|LINE|L1 134860 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr6-1193 chr6 169240789 169240999 + 12.5 0.000 intron (NM_003247, intron 6 of 22) intron (NM_003247, intron 6 of 22) 13220 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr9-2219 chr9 136404832 136405042 + 12.5 0.000 intron (NM_001039707, intron 7 of 9) intron (NM_001039707, intron 7 of 9) -5636 NM_001282946 23203 Hs.495471 NM_015160 ENSG00000165688 PMPCA Alpha-MPP|CLA1|CPD3|INPP5E|P-55|SCAR2 peptidase, mitochondrial processing alpha subunit protein-coding chr13-1825 chr13 70512682 70512892 + 12.5 0.000 Intergenic Intergenic -404294 NM_001286725 57626 Hs.508201 NM_020866 ENSG00000150361 KLHL1 MRP2 kelch like family member 1 protein-coding chr10-2006 chr10 59079398 59079608 + 12.5 0.000 Intergenic Intergenic 79985 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA chr14-1441 chr14 84561559 84561769 + 12.5 0.000 Intergenic MER52-int|LTR|ERV1 -710268 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr16-4186 chr16 10991923 10992133 + 12.5 0.000 intron (NM_015226, intron 9 of 22) intron (NM_015226, intron 9 of 22) 47464 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr7-768 chr7 32891665 32891875 + 12.5 0.000 promoter-TSS (NM_015483) promoter-TSS (NM_015483) -10 NM_015483 25948 Hs.372541 NM_015483 ENSG00000170852 KBTBD2 BKLHD1 kelch repeat and BTB domain containing 2 protein-coding chr8-2071 chr8 124848191 124848401 + 12.5 0.000 Intergenic Intergenic -26238 NR_039809 100616255 NR_039809 ENSG00000263735 MIR4662B - microRNA 4662b ncRNA chr22-1248 chr22 19603012 19603222 + 12.5 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -36278 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr10-4225 chr10 123648731 123648941 + 12.5 0.000 Intergenic Intergenic -17519 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr10-3849 chr10 11905644 11905854 + 12.4 0.000 Intergenic L1MD2|LINE|L1 -11039 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr7-4749 chr7 69594997 69595207 + 12.4 0.000 non-coding (NR_108105, exon 2 of 2) non-coding (NR_108105, exon 2 of 2) 2522 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr10-1942 chr10 12826908 12827118 + 12.4 0.000 TTS (NM_020397) TTS (NM_020397) -101660 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr2-2903 chr2 223563534 223563744 + 12.4 0.000 Intergenic Intergenic 38722 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr6-3452 chr6 151631268 151631478 + 12.4 0.000 Intergenic Intergenic -59123 NM_001122742 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr14-2922 chr14 40664668 40664878 + 12.4 0.000 Intergenic Intergenic -289938 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr15-1294 chr15 36106898 36107108 + 12.4 0.000 Intergenic Intergenic 180147 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr15-1676 chr15 44675120 44675330 + 12.4 0.000 intron (NM_001330283, intron 2 of 14) intron (NM_001330283, intron 2 of 14) 1663 NM_001330283 197135 Hs.11594 NM_001145112 ENSG00000229474 PATL2 OOMD4|Pat1a|hPat1a PAT1 homolog 2 protein-coding chr4-712 chr4 98659129 98659339 + 12.4 0.000 promoter-TSS (NM_005723) promoter-TSS (NM_005723) 332 NR_148380 105377342 Hs.122081 NR_148380 LOC105377342 - uncharacterized LOC105377342 ncRNA chr12-1593 chr12 11622817 11623027 + 12.4 0.000 Intergenic MER31-int|LTR|ERV1 -26932 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr2-3683 chr2 200350929 200351139 + 12.4 0.000 intron (NM_001282743, intron 2 of 11) intron (NM_001282743, intron 2 of 11) 42084 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr10-3330 chr10 7266523 7266733 + 12.4 0.000 intron (NM_001029880, intron 7 of 20) L2a|LINE|L2 -79844 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr7-2456 chr7 155958821 155959031 + 12.4 0.000 Intergenic (TAGCA)n|Simple_repeat|Simple_repeat -2293 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr18-1057 chr18 21851297 21851507 + 12.4 0.000 intron (NM_020774, intron 17 of 20) intron (NM_020774, intron 17 of 20) -19996 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA chr14-1528 chr14 58381978 58382188 + 12.4 0.000 Intergenic Intergenic -13847 NM_207377 387990 Hs.592307 NM_207377 ENSG00000196860 TOMM20L UNQ9438 translocase of outer mitochondrial membrane 20 like protein-coding chr11-2285 chr11 9726768 9726978 + 12.4 0.000 intron (NM_015055, intron 4 of 11) intron (NM_015055, intron 4 of 11) -31420 NR_036485 283104 Hs.632156 NR_036485 ENSG00000246273 SBF2-AS1 - SBF2 antisense RNA 1 ncRNA chr14-637 chr14 71586109 71586319 + 12.4 0.000 promoter-TSS (NM_001284246) promoter-TSS (NM_001284246) -84 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr3-2043 chr3 127041364 127041574 + 12.4 0.000 Intergenic Intergenic 52875 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr9-1757 chr9 130870854 130871064 + 12.4 0.000 intron (NM_007313, intron 4 of 10) intron (NM_007313, intron 4 of 10) 25853 NM_198180 347148 Hs.660704 NM_198180 ENSG00000188710 QRFP 26RFa|P518 pyroglutamylated RFamide peptide protein-coding chr19-3151 chr19 33293237 33293447 + 12.4 0.000 Intergenic Intergenic 9192 NM_001287424 1050 Hs.76171 NM_004364 ENSG00000245848 CEBPA C/EBP-alpha|CEBP CCAAT enhancer binding protein alpha protein-coding chr21-651 chr21 33397055 33397265 + 12.4 0.000 Intergenic Intergenic -5736 NM_001329128 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr6-2047 chr6 82040548 82040758 + 12.4 0.000 intron (NR_149135, intron 3 of 3) intron (NR_149135, intron 3 of 3) 61112 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr11-3249 chr11 73346126 73346336 + 12.4 0.000 intron (NM_014786, intron 1 of 20) MIR|SINE|MIR -30168 NM_152222 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr18-849 chr18 23982351 23982561 + 12.4 0.000 Intergenic Intergenic -10431 NM_153211 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr4-2464 chr4 925437 925647 + 12.4 0.000 intron (NM_005255, intron 1 of 27) intron (NM_005255, intron 1 of 27) 6774 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr1-5200 chr1 178093093 178093303 + 12.4 0.000 promoter-TSS (NM_170692) promoter-TSS (NM_170692) 795 NR_027982 100302401 Hs.736117 NR_027982 ENSG00000224687 RASAL2-AS1 - RASAL2 antisense RNA 1 ncRNA chr2-6000 chr2 74548763 74548973 + 12.4 0.000 promoter-TSS (NM_001197260) promoter-TSS (NM_001197260) -152 NM_001197260 1796 Hs.103854 NM_001381 ENSG00000115325 DOK1 P62DOK|pp62 docking protein 1 protein-coding chr2-3141 chr2 182182578 182182788 + 12.4 0.000 intron (NM_001258313, intron 13 of 13) L2a|LINE|L2 59380 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr2-6245 chr2 38538234 38538444 + 12.4 0.000 Intergenic Intergenic -22599 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chr22-662 chr22 41910645 41910855 + 12.4 0.000 exon (NM_001353438, exon 3 of 4) exon (NM_001353438, exon 3 of 4) 4324 NM_001353439 440829 Hs.526704 NM_001207020 ENSG00000234965 SHISA8 C22orf17|Orf26 shisa family member 8 protein-coding chr2-4650 chr2 188600587 188600797 + 12.4 0.000 Intergenic Intergenic 189431 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr9-819 chr9 35669258 35669468 + 12.4 0.000 Intergenic Intergenic -4168 NM_032818 84904 Hs.534579 NM_032818 ENSG00000137135 ARHGEF39 C9orf100 Rho guanine nucleotide exchange factor 39 protein-coding chr19-1639 chr19 3361077 3361287 + 12.4 0.000 intron (NM_001245005, intron 1 of 9) CpG-13279 1552 NM_205843 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr20-1456 chr20 62209413 62209623 + 12.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 10760 NM_007232 11255 Hs.251399 NM_007232 ENSG00000101180 HRH3 GPCR97|HH3R histamine receptor H3 protein-coding chr1-4186 chr1 41109512 41109722 + 12.4 0.000 intron (NM_001172222, intron 4 of 10) intron (NM_001172222, intron 4 of 10) 51815 NM_001031694 22955 Hs.571874 NM_012236 ENSG00000010803 SCMH1 Scml3 Scm polycomb group protein homolog 1 protein-coding chr10-2094 chr10 122152465 122152675 + 12.4 0.000 intron (NM_206862, intron 7 of 22) intron (NM_206862, intron 7 of 22) -11060 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chrX-655 chrX 103565796 103566006 + 12.4 0.000 Intergenic L1MA6|LINE|L1 -10330 NM_001300901 79921 Hs.194329 NM_024863 ENSG00000133142 TCEAL4 NPD017|WEX7 transcription elongation factor A like 4 protein-coding chr9-3731 chr9 115944205 115944415 + 12.4 0.000 Intergenic Intergenic -19103 NR_024032 58483 Hs.23367 NR_024032 ENSG00000204148 LINC00474 C9orf27|EST-YD1 long intergenic non-protein coding RNA 474 ncRNA chr10-1360 chr10 122854106 122854316 + 12.4 0.000 intron (NM_152644, intron 2 of 3) intron (NM_152644, intron 2 of 3) -8354 NR_037912 50624 Hs.647182 NM_022034 ENSG00000138161 CUZD1 ERG-1|ERG1|ITMAP1|UO-44 CUB and zona pellucida like domains 1 protein-coding chr9-4105 chr9 131217680 131217890 + 12.4 0.000 intron (NM_001318324, intron 31 of 35) intron (NM_001318324, intron 31 of 35) 27646 NM_001318325 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr11-1554 chr11 61954924 61955134 + 12.4 0.000 promoter-TSS (NM_001363591) promoter-TSS (NM_001363591) -206 NM_001363593 7439 Hs.524910 NM_004183 ENSG00000167995 BEST1 ARB|BEST|BMD|Best1V1Delta2|RP50|TU15B|VMD2 bestrophin 1 protein-coding chr13-1583 chr13 38520398 38520608 + 12.4 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -47221 NR_046999 100874147 Hs.555371 NR_046999 LINC00366 - long intergenic non-protein coding RNA 366 ncRNA chr10-1540 chr10 88990703 88990913 + 12.4 0.000 promoter-TSS (NR_028035) promoter-TSS (NR_028035) 10 NM_152872 355 Hs.244139 NM_000043 ENSG00000026103 FAS ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 Fas cell surface death receptor protein-coding chr6-1515 chr6 10404435 10404645 + 12.4 0.000 promoter-TSS (NR_145448) promoter-TSS (NR_145448) 38 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr12-1657 chr12 50021287 50021497 + 12.4 0.000 intron (NM_001126103, intron 1 of 18) intron (NM_001126103, intron 1 of 18) 4102 NM_001319999 29127 Hs.505469 NM_013277 ENSG00000161800 RACGAP1 CYK4|HsCYK-4|ID-GAP|MgcRacGAP Rac GTPase activating protein 1 protein-coding chr2-9195 chr2 216436532 216436742 + 12.4 0.000 intron (NM_001127207, intron 9 of 17) intron (NM_001127207, intron 9 of 17) 23872 NM_001127207 50485 Hs.516674 NM_014140 ENSG00000138375 SMARCAL1 HARP|HHARP SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 protein-coding chr8-2682 chr8 90467805 90468015 + 12.4 0.000 Intergenic Intergenic 138153 NR_104062 101937451 Hs.583685 NR_104062 ENSG00000253799 LINC01030 - long intergenic non-protein coding RNA 1030 ncRNA chr3-2330 chr3 133578614 133578824 + 12.4 0.000 intron (NM_001282765, intron 2 of 4) intron (NM_001282765, intron 2 of 4) 4285 NM_001282765 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr1-4671 chr1 214297113 214297323 + 12.4 0.000 intron (NM_020197, intron 1 of 11) intron (NM_020197, intron 1 of 11) 16059 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr8-2011 chr8 100602777 100602987 + 12.4 0.000 intron (NM_152628, intron 8 of 13) MER44B|DNA|TcMar-Tigger 15523 NM_001363720 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr7-2707 chr7 28055152 28055362 + 12.4 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -125200 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr4-2174 chr4 101621146 101621356 + 12.4 0.000 Intergenic Intergenic -169356 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr7-3855 chr7 101769626 101769836 + 12.4 0.000 Intergenic Intergenic -46276 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr8-1437 chr8 123396431 123396641 + 12.4 0.000 promoter-TSS (NM_014109) promoter-TSS (NM_014109) -89 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr7-1407 chr7 19939865 19940075 + 12.4 0.000 intron (NR_110114, intron 5 of 5) LTR105_Mam|LTR|ERVL -166353 NM_001366626 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding chr12-946 chr12 53099278 53099488 + 12.4 0.000 intron (NM_002178, intron 1 of 3) intron (NM_002178, intron 1 of 3) 1716 NM_002178 3489 Hs.274313 NM_002178 ENSG00000167779 IGFBP6 IBP6 insulin like growth factor binding protein 6 protein-coding chr19-3674 chr19 10611943 10612153 + 12.4 0.000 intron (NM_001145056, intron 1 of 21) intron (NM_001145056, intron 1 of 21) 9593 NM_001145056 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr2-4074 chr2 127419385 127419595 + 12.4 0.000 intron (NM_000312, intron 1 of 8) MIR|SINE|MIR 1070 NM_000312 5624 Hs.224698 NM_000312 ENSG00000115718 PROC APC|PC|PROC1|THPH3|THPH4 protein C, inactivator of coagulation factors Va and VIIIa protein-coding chr11-4177 chr11 57959193 57959403 + 12.4 0.000 Intergenic MER44B|DNA|TcMar-Tigger -64583 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr16-1175 chr16 87931515 87931725 + 12.4 0.000 intron (NM_001739, intron 1 of 6) intron (NM_001739, intron 1 of 6) 4909 NM_001367225 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr5-5881 chr5 10745243 10745453 + 12.4 0.000 intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 15886 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr8-3809 chr8 28471957 28472167 + 12.4 0.000 intron (NM_001258211, intron 2 of 7) LTR50|LTR|ERVL 18167 NM_172366 157574 Hs.741522 NM_172366 ENSG00000214050 FBXO16 FBX16 F-box protein 16 protein-coding chr3-1160 chr3 119241447 119241657 + 12.4 0.000 promoter-TSS (NM_212543) promoter-TSS (NM_212543) -674 NM_003778 8702 Hs.13225 NM_003778 ENSG00000121578 B4GALT4 B4Gal-T4|beta4Gal-T4 beta-1,4-galactosyltransferase 4 protein-coding chr11-3371 chr11 124899585 124899795 + 12.4 0.000 Intergenic Intergenic -1825 NM_019055 54538 Hs.524121 NM_019055 ENSG00000154133 ROBO4 ECSM4|MRB roundabout guidance receptor 4 protein-coding chr10-2372 chr10 98618346 98618556 + 12.4 0.000 intron (NM_021828, intron 8 of 11) intron (NM_021828, intron 8 of 11) -171488 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr17-1573 chr17 35293419 35293629 + 12.4 0.000 Intergenic L1P4|LINE|L1 50452 NM_144975 162394 Hs.585792 NM_144975 ENSG00000166750 SLFN5 - schlafen family member 5 protein-coding chr10-999 chr10 80413544 80413754 + 12.4 0.000 promoter-TSS (NM_001243778) promoter-TSS (NM_001243778) -170 NM_001243778 84293 Hs.500333 NM_032333 ENSG00000122378 PRXL2A Adrx|C10orf58|FAM213A|PAMM peroxiredoxin like 2A protein-coding chr6-1945 chr6 111604228 111604438 + 12.4 0.000 intron (NM_147200, intron 1 of 9) intron (NM_147200, intron 1 of 9) 1545 NM_147686 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr3-1884 chr3 136672029 136672239 + 12.4 0.000 intron (NM_005862, intron 1 of 33) intron (NM_005862, intron 1 of 33) 80244 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr1-4221 chr1 154442007 154442217 + 12.4 0.000 intron (NM_000565, intron 6 of 9) intron (NM_000565, intron 6 of 9) -35548 NR_147855 101928101 Hs.617089 NR_147855 ENSG00000228013 IL6R-AS1 - IL6R antisense RNA 1 ncRNA chr2-5604 chr2 178820197 178820407 + 12.4 0.000 Intergenic Intergenic -12879 NM_001256850 7273 Hs.134602 NM_003319 ENSG00000155657 TTN CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|LGMDR10|MYLK5|SALMY|TMD titin protein-coding chr2-6469 chr2 165432774 165432984 + 12.4 0.000 Intergenic MER5A1|DNA|hAT-Charlie -36819 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr1-7028 chr1 172383584 172383794 + 12.4 0.000 intron (NR_146559, intron 18 of 20) intron (NR_146559, intron 18 of 20) -36996 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr11-3350 chr11 120403990 120404200 + 12.4 0.000 intron (NM_001301084, intron 1 of 40) intron (NM_001301084, intron 1 of 40) 18768 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr7-5226 chr7 15540302 15540512 + 12.4 0.000 intron (NM_001004320, intron 3 of 12) LTR41C|LTR|ERVL 21608 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chr11-4080 chr11 23708674 23708884 + 12.4 0.000 Intergenic L1M1|LINE|L1 -289589 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr10-3851 chr10 13815726 13815936 + 12.4 0.000 intron (NM_001318336, intron 2 of 23) MamRep605|LTR?|LTR? -108264 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr3-3064 chr3 128830033 128830243 + 12.4 0.000 Intergenic HERVH-int|LTR|ERV1 -16670 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr2-1069 chr2 240251248 240251458 + 12.4 0.000 Intergenic Intergenic -110695 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr4-1365 chr4 27030248 27030458 + 12.4 0.000 Intergenic Intergenic 169512 NM_001169118 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chr11-1180 chr11 67303389 67303599 + 12.4 0.000 promoter-TSS (NM_017857) promoter-TSS (NM_017857) -36 NM_017857 54961 Hs.29173 NM_017857 ENSG00000172830 SSH3 SSH3L slingshot protein phosphatase 3 protein-coding chr3-1874 chr3 127903617 127903827 + 12.4 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -11510 NM_001370224 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr3-2166 chr3 158792834 158793044 + 12.4 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -9115 NM_001167903 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr13-647 chr13 30142880 30143090 + 12.4 0.000 Intergenic Intergenic 10089 NR_138041 102157400 Hs.639879 NR_138041 LINC00384 - long intergenic non-protein coding RNA 384 ncRNA chr1-6887 chr1 118680843 118681053 + 12.4 0.000 Intergenic L2a|LINE|L2 307395 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr21-290 chr21 44764199 44764409 + 12.4 0.000 Intergenic Intergenic 37516 NM_001202489 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding chr3-2688 chr3 50458276 50458486 + 12.4 0.000 intron (NM_001291101, intron 2 of 37) intron (NM_001291101, intron 2 of 37) 45253 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr15-1741 chr15 48428139 48428349 + 12.4 0.000 intron (NM_000138, intron 57 of 65) intron (NM_000138, intron 57 of 65) 96047 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr15-2742 chr15 100043418 100043628 + 12.4 0.000 intron (NM_139057, intron 18 of 21) intron (NM_139057, intron 18 of 21) 236500 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr7-1687 chr7 149065808 149066018 + 12.4 0.000 Intergenic CpG 24805 NM_152411 136051 Hs.729572 NM_152411 ENSG00000197362 ZNF786 - zinc finger protein 786 protein-coding chr22-2979 chr22 50317770 50317980 + 12.4 0.000 intron (NM_001001794, intron 4 of 19) intron (NM_001001794, intron 4 of 19) 9137 NM_001001794 414918 Hs.530380 NM_001001794 ENSG00000205593 DENND6B AFI1B|FAM116B DENN domain containing 6B protein-coding chr2-2450 chr2 71890058 71890268 + 12.4 0.000 Intergenic Plat_L3|LINE|CR1 257699 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr8-2797 chr8 122433969 122434179 + 12.4 0.000 intron (NR_131202, intron 2 of 3) intron (NR_131202, intron 2 of 3) 134570 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr10-2873 chr10 88968470 88968680 + 12.4 0.000 intron (NM_001320855, intron 1 of 8) intron (NM_001320855, intron 1 of 8) -15802 NM_001613 59 Hs.500483 NM_001613 ENSG00000107796 ACTA2 ACTSA actin alpha 2, smooth muscle protein-coding chr12-869 chr12 49121141 49121351 + 12.4 0.000 Intergenic Intergenic 10149 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr8-1387 chr8 23421406 23421616 + 12.4 0.000 Intergenic HERVK3-int|LTR|ERVK -17391 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr1-1503 chr1 16075306 16075516 + 12.4 0.000 Intergenic Intergenic -1760 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr16-1851 chr16 69502383 69502593 + 12.4 0.000 Intergenic Intergenic 63380 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chrX-742 chrX 11831495 11831705 + 12.4 0.000 intron (NM_001368398, intron 1 of 18) L2|LINE|L2 9161 NM_001368398 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr17-1691 chr17 16905878 16906088 + 12.4 0.000 Intergenic L1PA16|LINE|L1 27193 NR_147084 96597 NR_147084 TBC1D27P TBC1D27 TBC1 domain family member 27, pseudogene pseudo chr1-13137 chr1 201175335 201175545 + 12.4 0.000 Intergenic Intergenic -3858 NM_001288564 252839 Hs.181444 NM_016456 ENSG00000116857 TMEM9 DERM4|TMEM9A transmembrane protein 9 protein-coding chr3-5038 chr3 33599465 33599675 + 12.4 0.000 intron (NM_001365632, intron 18 of 37) intron (NM_001365632, intron 18 of 37) 60109 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr1-3843 chr1 29688590 29688800 + 12.4 0.000 Intergenic L1MCc|LINE|L1 -338581 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr5-2613 chr5 139810362 139810572 + 12.4 0.000 intron (NM_032289, intron 2 of 14) intron (NM_032289, intron 2 of 14) 14659 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr9-3662 chr9 96150353 96150563 + 12.4 0.000 Intergenic MER20|DNA|hAT-Charlie -34047 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr13-907 chr13 49517703 49517913 + 12.4 0.000 intron (NM_001040444, intron 3 of 9) intron (NM_001040444, intron 3 of 9) 20752 NM_001040444 51131 Hs.369039 NM_001040443 ENSG00000136147 PHF11 APY|BCAP|IGEL|IGER|IGHER|NY-REN-34|NYREN34 PHD finger protein 11 protein-coding chr3-4011 chr3 61843663 61843873 + 12.4 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 282197 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr22-499 chr22 35446386 35446596 + 12.4 0.000 Intergenic Intergenic 46351 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|MGORS8|P1-CDC46 minichromosome maintenance complex component 5 protein-coding chr3-1394 chr3 108419625 108419835 + 12.4 0.000 intron (NM_014981, intron 29 of 41) intron (NM_014981, intron 29 of 41) 107945 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr14-2543 chr14 23153806 23154016 + 12.4 0.000 intron (NM_012244, intron 3 of 10) intron (NM_012244, intron 3 of 10) 482 NM_182728 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr3-2206 chr3 17643825 17644035 + 12.4 0.000 intron (NM_001349090, intron 1 of 21) intron (NM_001349090, intron 1 of 21) 56090 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr4-3399 chr4 42477372 42477582 + 12.4 0.000 intron (NM_001105529, intron 24 of 35) L1ME3Cz|LINE|L1 79989 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr7-1755 chr7 45689670 45689880 + 12.4 0.000 intron (NM_021116, intron 14 of 19) intron (NM_021116, intron 14 of 19) 79243 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr11-4184 chr11 59862723 59862933 + 12.4 0.000 intron (NM_001062, intron 2 of 8) intron (NM_001062, intron 2 of 8) 3659 NM_001062 6947 Hs.2012 NM_001062 ENSG00000134827 TCN1 HC|TC-1|TC1|TCI transcobalamin 1 protein-coding chr21-310 chr21 45459457 45459667 + 12.4 0.000 intron (NM_130444, intron 1 of 41) intron (NM_130444, intron 1 of 41) 4040 NM_130444 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr14-1189 chr14 67567156 67567366 + 12.4 0.000 intron (NM_020715, intron 7 of 28) intron (NM_020715, intron 7 of 28) 33007 NM_004569 5283 Hs.553497 NM_004569 ENSG00000100564 PIGH GPI-H phosphatidylinositol glycan anchor biosynthesis class H protein-coding chr1-11460 chr1 89455094 89455304 + 12.4 0.000 Intergenic Intergenic 47520 NR_003133 400759 Hs.661968 NR_003133 ENSG00000225492 GBP1P1 - guanylate binding protein 1 pseudogene 1 pseudo chr8-2362 chr8 29971873 29972083 + 12.4 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -14630 NR_036104 100422876 NR_036104 ENSG00000264788 MIR3148 mir-3148 microRNA 3148 ncRNA chr9-1891 chr9 120928746 120928956 + 12.4 0.000 intron (NM_001190945, intron 1 of 8) CpG 322 NM_001190945 7185 Hs.531251 NM_005658 ENSG00000056558 TRAF1 EBI6|MGC:10353 TNF receptor associated factor 1 protein-coding chr1-4651 chr1 185571213 185571423 + 12.4 0.000 intron (NR_110793, intron 2 of 3) intron (NR_110793, intron 2 of 3) 57170 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr15-1857 chr15 58441750 58441960 + 12.4 0.000 intron (NR_120338, intron 2 of 2) intron (NR_120338, intron 2 of 2) 9864 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr5-1778 chr5 35372498 35372708 + 12.4 0.000 Intergenic Intergenic -142116 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr3-3799 chr3 14789757 14789967 + 12.4 0.000 Intergenic L2|LINE|L2 21552 NR_135245 152274 Hs.434128 NR_135245 ENSG00000260902 LINC02011 - long intergenic non-protein coding RNA 2011 ncRNA chr17-4468 chr17 60212898 60213108 + 12.4 0.000 intron (NM_032582, intron 18 of 33) AluSz|SINE|Alu 18642 NR_002999 677681 NR_002999 ENSG00000252577 SCARNA20 ACA66 small Cajal body-specific RNA 20 ncRNA chr18-1329 chr18 75544718 75544928 + 12.4 0.000 Intergenic Intergenic -117120 NM_001037331 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr10-1825 chr10 5449947 5450157 + 12.4 0.000 intron (NM_005863, intron 1 of 9) intron (NM_005863, intron 1 of 9) 3443 NM_005863 10276 Hs.25155 NM_005863 ENSG00000173848 NET1 ARHGEF8|NET1A neuroepithelial cell transforming 1 protein-coding chr17-1068 chr17 80187662 80187872 + 12.4 0.000 promoter-TSS (NM_052819) promoter-TSS (NM_052819) -33 NM_052819 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr15-1763 chr15 65069205 65069415 + 12.4 0.000 Intergenic Intergenic -1319 NM_016563 51285 Hs.27018 NM_016563 ENSG00000103710 RASL12 RIS RAS like family 12 protein-coding chr20-979 chr20 49054348 49054558 + 12.4 0.000 intron (NM_001362762, intron 1 of 24) intron (NM_001362762, intron 1 of 24) 8141 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr22-890 chr22 50627899 50628109 + 12.4 0.000 5' UTR (NM_001362782, exon 1 of 8) 5' UTR (NM_001362782, exon 1 of 8) 148 NM_000487 410 Hs.88251 NM_000487 ENSG00000100299 ARSA ASA|MLD arylsulfatase A protein-coding chr12-1716 chr12 13199156 13199366 + 12.4 0.000 intron (NM_001423, intron 1 of 4) intron (NM_001423, intron 1 of 4) 2535 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr11-2733 chr11 14672685 14672895 + 12.4 0.000 intron (NM_000922, intron 1 of 15) MLT1J|LTR|ERVL-MaLR 28986 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr1-4012 chr1 172902994 172903204 + 12.4 0.000 Intergenic Intergenic 147864 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr10-1020 chr10 71981524 71981734 + 12.4 0.000 intron (NM_004273, intron 1 of 2) intron (NM_004273, intron 1 of 2) 17234 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr18-525 chr18 61825417 61825627 + 12.4 0.000 intron (NM_173557, intron 1 of 1) intron (NM_173557, intron 1 of 1) 67485 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr3-2657 chr3 31277736 31277946 + 12.4 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -116054 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr6-1380 chr6 96521516 96521726 + 12.4 0.000 promoter-TSS (NM_015323) promoter-TSS (NM_015323) -185 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr1-3047 chr1 6930241 6930451 + 12.4 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 144892 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr7-1760 chr7 55039844 55040054 + 12.4 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) 20917 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr5-1194 chr5 71883451 71883661 + 12.4 0.000 Intergenic Intergenic 164281 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr7-2604 chr7 145134457 145134667 + 12.4 0.000 Intergenic Intergenic -298509 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr1-3589 chr1 10861481 10861691 + 12.4 0.000 Intergenic MIR3|SINE|MIR -64940 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr11-2600 chr11 130215225 130215435 + 12.4 0.000 Intergenic Intergenic 55548 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr10-2695 chr10 101995879 101996089 + 12.4 0.000 intron (NM_024541, intron 15 of 25) L2a|LINE|L2 60189 NM_024541 79591 Hs.16004 NM_024541 ENSG00000120029 ARMH3 C10orf76 armadillo like helical domain containing 3 protein-coding chr1-2548 chr1 9881786 9881996 + 12.4 0.000 intron (NM_001012329, intron 1 of 4) intron (NM_001012329, intron 1 of 4) 28378 NM_001012329 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr5-2063 chr5 136399008 136399218 + 12.4 0.000 Intergenic MER91A|DNA|hAT-Tip100 -33637 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr2-2658 chr2 208183059 208183269 + 12.4 0.000 intron (NM_001099334, intron 3 of 8) intron (NM_001099334, intron 3 of 8) 6866 NM_001099334 389073 Hs.198416 NM_001099334 ENSG00000188674 C2orf80 GONDA1 chromosome 2 open reading frame 80 protein-coding chr10-3557 chr10 78717223 78717433 + 12.4 0.000 Intergenic Intergenic 350120 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr3-2621 chr3 186806520 186806730 + 12.4 0.000 promoter-TSS (NM_002916) promoter-TSS (NM_002916) 70 NM_181573 5984 Hs.732098 NM_002916 ENSG00000163918 RFC4 A1|RFC37 replication factor C subunit 4 protein-coding chr19-2172 chr19 12867710 12867920 + 12.4 0.000 exon (NM_014975, exon 20 of 26) exon (NM_014975, exon 20 of 26) 13634 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr13-1725 chr13 98686103 98686313 + 12.4 0.000 exon (NM_005073, exon 22 of 23) exon (NM_005073, exon 22 of 23) 66464 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr3-7211 chr3 191996034 191996244 + 12.4 0.000 Intergenic Intergenic -242491 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr6-1749 chr6 47670449 47670659 + 12.4 0.000 intron (NM_153839, intron 2 of 10) intron (NM_153839, intron 2 of 10) 14082 NM_153839 222611 Hs.724860 NM_153839 ENSG00000164393 ADGRF2 GPR111|PGR20|hGPCR35 adhesion G protein-coupled receptor F2 protein-coding chr5-2651 chr5 9348447 9348657 + 12.4 0.000 intron (NM_003966, intron 3 of 22) intron (NM_003966, intron 3 of 22) -162781 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr17-2781 chr17 2937321 2937531 + 12.4 0.000 intron (NM_001330058, intron 3 of 24) intron (NM_001330058, intron 3 of 24) 28469 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr11-1833 chr11 67013248 67013458 + 12.4 0.000 Intergenic L3|LINE|CR1 -9440 NM_001318773 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr8-4905 chr8 90327322 90327532 + 12.4 0.000 intron (NR_051989, intron 2 of 3) intron (NR_051989, intron 2 of 3) 105939 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr10-1517 chr10 35212852 35213062 + 12.4 0.000 TTS (NM_001352467) TTS (NM_001352467) 17055 NM_182723 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr6-3677 chr6 151425318 151425528 + 12.4 0.000 intron (NM_001271937, intron 5 of 10) intron (NM_001271937, intron 5 of 10) 26703 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr9-747 chr9 21802393 21802603 + 12.4 0.000 promoter-TSS (NM_002451) promoter-TSS (NM_002451) -138 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr20-1132 chr20 35598869 35599079 + 12.4 0.000 intron (NR_119376, intron 19 of 42) intron (NR_119376, intron 19 of 42) 8588 NR_119376 80307 Hs.72222 NR_001442 ENSG00000088340 FER1L4 C20orf124 fer-1 like family member 4 (pseudogene) pseudo chr11-7392 chr11 79487483 79487693 + 12.4 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -46558 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr17-3323 chr17 66628071 66628281 + 12.4 0.000 intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -158896 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr10-3286 chr10 133608832 133609042 + 12.4 0.000 Intergenic HERVK14C-int|LTR|ERVK 17858 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family member B protein-coding chr14-2288 chr14 55963474 55963684 + 12.4 0.000 Intergenic L2c|LINE|L2 -154832 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr13-1534 chr13 27098828 27099038 + 12.4 0.000 intron (NM_182488, intron 3 of 8) L1ME3G|LINE|L1 -26600 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr3-3579 chr3 56314996 56315206 + 12.4 0.000 intron (NR_132749, intron 2 of 17) intron (NR_132749, intron 2 of 17) 153366 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr13-890 chr13 39151712 39151922 + 12.4 0.000 Intergenic L4_A_Mam|LINE|RTE-X 113361 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr1-3201 chr1 155472546 155472756 + 12.4 0.000 intron (NM_018489, intron 3 of 27) MER102c|DNA|hAT-Charlie 39471 NR_034180 645682 Hs.632482 NR_034180 ENSG00000237872 POU5F1P4 OCT3|OCT4|OTF-3|OTF3|Oct-3|Oct-4|Oct4-pg4|POU5F1|POU5FLC1 POU class 5 homeobox 1 pseudogene 4 pseudo chr11-4330 chr11 71618553 71618763 + 12.4 0.000 Intergenic SATR1|Satellite|Satellite -35783 NM_001005405 440051 Hs.679617 NM_001005405 ENSG00000204571 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding chr1-3800 chr1 15571963 15572173 + 12.4 0.000 TTS (NM_001287811) TTS (NM_001287811) 12983 NM_024758 79814 Hs.461532 NM_024758 ENSG00000116771 AGMAT - agmatinase protein-coding chr9-3433 chr9 136292427 136292637 + 12.4 0.000 intron (NR_111982, intron 4 of 9) MIRb|SINE|MIR 11562 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr2-3339 chr2 207183065 207183275 + 12.4 0.000 Intergenic Intergenic -15924 NM_001270943 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr9-1686 chr9 89149877 89150087 + 12.4 0.000 intron (NM_016848, intron 1 of 11) MER44B|DNA|TcMar-Tigger 28836 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr6-1766 chr6 74087987 74088197 + 12.4 0.000 intron (NR_110856, intron 1 of 3) intron (NR_110856, intron 1 of 3) 18641 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr3-3454 chr3 155015971 155016181 + 12.4 0.000 Intergenic Intergenic -8048 NM_001354642 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr6-597 chr6 41936291 41936501 + 12.4 0.000 intron (NM_001136125, intron 3 of 3) intron (NM_001136125, intron 3 of 3) 5452 NM_001287427 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chrX-858 chrX 135017968 135018178 + 12.4 0.000 Intergenic Intergenic 4469 NM_001078173 441518 Hs.378813 NM_001078173 ENSG00000212747 RTL8B CXX1c|FAM127C|MAR8B|SIRH4 retrotransposon Gag like 8B protein-coding chr15-1626 chr15 87730679 87730889 + 12.4 0.000 Intergenic Intergenic 153855 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr2-2952 chr2 21451542 21451752 + 12.4 0.000 Intergenic Intergenic 259005 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr14-1002 chr14 103488986 103489196 + 12.4 0.000 intron (NM_001128920, intron 14 of 15) intron (NM_001128920, intron 14 of 15) 33739 NM_001823 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr6-3723 chr6 2818635 2818845 + 12.4 0.000 Intergenic Intergenic 23123 NM_030666 1992 Hs.381167 NM_030666 ENSG00000021355 SERPINB1 EI|ELANH2|HEL-S-27|HEL57|LEI|M/NEI|MNEI|PI-2|PI2 serpin family B member 1 protein-coding chr2-2764 chr2 220509360 220509570 + 12.4 0.000 Intergenic Intergenic -602900 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr9-1390 chr9 93955512 93955722 + 12.4 0.000 promoter-TSS (NM_021570) promoter-TSS (NM_021570) -217 NR_144455 101928040 Hs.375820 NR_144455 ENSG00000235601 BARX1-DT BARX1-AS1 BARX1 divergent transcript ncRNA chr10-1705 chr10 47375126 47375336 + 12.4 0.000 intron (NM_001346932, intron 2 of 3) MER63C|DNA|hAT-Blackjack 9062 NM_001346934 118738 Hs.27788 NM_153034 ENSG00000265763 ZNF488 - zinc finger protein 488 protein-coding chr1-7733 chr1 30477100 30477310 + 12.4 0.000 Intergenic Intergenic -241567 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr9-4231 chr9 77988178 77988388 + 12.4 0.000 intron (NM_002072, intron 1 of 6) L2a|LINE|L2 43528 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr6-2069 chr6 121260801 121261011 + 12.4 0.000 intron (NR_104452, intron 15 of 35) L1PA8|LINE|L1 73574 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr17-2753 chr17 80921190 80921400 + 12.4 0.000 intron (NM_020761, intron 21 of 33) intron (NM_020761, intron 21 of 33) 49918 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr15-1893 chr15 72516068 72516278 + 12.4 0.000 intron (NM_005744, intron 1 of 13) intron (NM_005744, intron 1 of 13) 41843 NM_005744 25820 Hs.268787 NM_005744 ENSG00000166233 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding chr11-1243 chr11 73482085 73482295 + 12.4 0.000 intron (NM_001286051, intron 1 of 5) (T)n|Simple_repeat|Simple_repeat 105522 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr11-3180 chr11 63944189 63944399 + 12.4 0.000 intron (NM_001300800, intron 1 of 7) intron (NM_001300800, intron 1 of 7) 4963 NM_001300800 79829 Hs.523753 NM_024771 ENSG00000110583 NAA40 NAT11|NatD|PATT1|hNatD N(alpha)-acetyltransferase 40, NatD catalytic subunit protein-coding chr3-3679 chr3 151460859 151461069 + 12.4 0.000 Intergenic Intergenic -2255 NM_178822 285313 Hs.58561 NM_178822 ENSG00000152580 IGSF10 CMF608 immunoglobulin superfamily member 10 protein-coding chr18-2709 chr18 63187287 63187497 + 12.4 0.000 intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 131988 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr5-1361 chr5 52799914 52800124 + 12.4 0.000 5' UTR (NM_015946, exon 2 of 3) 5' UTR (NM_015946, exon 2 of 3) 12103 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr1-5896 chr1 8590903 8591113 + 12.4 0.000 intron (NM_001042681, intron 4 of 22) intron (NM_001042681, intron 4 of 22) -96095 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr19-2200 chr19 29598572 29598782 + 12.4 0.000 Intergenic Intergenic -7606 NR_027368 10775 Hs.412870 NM_006627 ENSG00000105171 POP4 RPP29 POP4 homolog, ribonuclease P/MRP subunit protein-coding chr14-940 chr14 31165858 31166068 + 12.4 0.000 intron (NM_015382, intron 10 of 42) AluSz|SINE|Alu 41830 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr15-2282 chr15 58545403 58545613 + 12.4 0.000 intron (NM_000236, intron 4 of 8) intron (NM_000236, intron 4 of 8) -46773 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr8-2448 chr8 119263959 119264169 + 12.4 0.000 Intergenic Intergenic -17207 NR_149114 105375726 Hs.666095 NR_149111 MAL2-AS1 - MAL2 antisense RNA 1 ncRNA chr11-4687 chr11 64827795 64828005 + 12.4 0.000 intron (NM_017525, intron 30 of 36) intron (NM_017525, intron 30 of 36) -16606 NM_130803 4221 Hs.423348 NM_000244 ENSG00000133895 MEN1 MEAI|SCG2 menin 1 protein-coding chr4-3000 chr4 123217934 123218144 + 12.4 0.000 intron (NM_001345856, intron 14 of 15) intron (NM_001345856, intron 14 of 15) -178756 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr15-1527 chr15 62035641 62035851 + 12.4 0.000 intron (NM_001018088, intron 3 of 81) Tigger16b|DNA|TcMar-Tigger 24701 NM_017684 54832 Hs.511668 NM_017684 ENSG00000129003 VPS13C PARK23 vacuolar protein sorting 13 homolog C protein-coding chr18-817 chr18 3579693 3579903 + 12.4 0.000 intron (NM_001242762, intron 5 of 9) intron (NM_001242762, intron 5 of 9) -14316 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914 DLGAP1 antisense RNA 1 ncRNA chr6-5347 chr6 147891331 147891541 + 12.4 0.000 Intergenic Intergenic -380892 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr3-4307 chr3 162719753 162719963 + 12.4 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 583443 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr15-1248 chr15 77353119 77353329 + 12.4 0.000 intron (NM_024776, intron 1 of 7) MLT1H1|LTR|ERVL-MaLR 66880 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding chr6-6506 chr6 119933867 119934077 + 12.4 0.000 Intergenic Kanga1|DNA|TcMar-Tc2 -81207 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chrX-551 chrX 15947180 15947390 + 12.4 0.000 Intergenic LTR16A1|LTR|ERVL -92472 NM_001272071 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr19-3422 chr19 18040282 18040492 + 12.4 0.000 Intergenic Intergenic 32217 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr9-3088 chr9 21901992 21902202 + 12.4 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -65042 NR_024274 51198 Hs.721053 NM_016349 CDKN2A-DT C9orf53|CDKN2A-AS1|bA149I2.3 CDKN2A divergent transcript ncRNA chr8-1140 chr8 133537750 133537960 + 12.4 0.000 intron (NM_003033, intron 2 of 8) intron (NM_003033, intron 2 of 8) 34032 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr1-3878 chr1 52351051 52351261 + 12.4 0.000 3' UTR (NM_001330585, exon 25 of 25) 3' UTR (NM_001330585, exon 25 of 25) 15049 NM_001330585 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr11-3236 chr11 71212541 71212751 + 12.4 0.000 intron (NM_012309, intron 1 of 24) intron (NM_012309, intron 1 of 24) 12150 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr6-1404 chr6 131233309 131233519 + 12.4 0.000 intron (NM_016377, intron 7 of 7) MIRb|SINE|MIR -16990 NM_004842 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr20-1430 chr20 40717084 40717294 + 12.4 0.000 Intergenic Intergenic -2566 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr9-1728 chr9 123402010 123402220 + 12.4 0.000 TTS (NR_030332) TTS (NR_030332) 488 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr13-1764 chr13 113004119 113004329 + 12.4 0.000 intron (NM_001320815, intron 1 of 30) intron (NM_001320815, intron 1 of 30) 2510 NM_001320817 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr10-1111 chr10 100342468 100342678 + 12.4 0.000 Intergenic Intergenic -4660 NM_005063 6319 Hs.558396 NM_005063 ENSG00000099194 SCD FADS5|MSTP008|SCD1|SCDOS|hSCD1 stearoyl-CoA desaturase protein-coding chrX-676 chrX 15292772 15292982 + 12.4 0.000 intron (NM_001012428, intron 4 of 6) intron (NM_001012428, intron 4 of 6) 21682 NM_001012428 140456 Hs.352183 NM_080873 ENSG00000165192 ASB11 - ankyrin repeat and SOCS box containing 11 protein-coding chr15-1295 chr15 36161924 36162134 + 12.4 0.000 Intergenic Intergenic 235173 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr9-3172 chr9 123154478 123154688 + 12.4 0.000 intron (NR_033234, intron 11 of 18) L1ME3B|LINE|L1 -39106 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chr2-1908 chr2 160062310 160062520 + 12.4 0.000 5' UTR (NM_001195641, exon 1 of 30) 5' UTR (NM_001195641, exon 1 of 30) 200 NM_001007267 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr5-1726 chr5 145830932 145831142 + 12.4 0.000 intron (NM_138492, intron 1 of 7) intron (NM_138492, intron 1 of 7) 4305 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr4-1363 chr4 21802476 21802686 + 12.4 0.000 intron (NM_147182, intron 1 of 8) MIRc|SINE|MIR 50607 NR_002813 359822 Hs.354058 NR_002813 ENSG00000280650 KCNIP4-IT1 NCRNA00099|UM9(5)|UM9-5 KCNIP4 intronic transcript 1 ncRNA chr4-3779 chr4 98071848 98072058 + 12.4 0.000 intron (NM_174952, intron 5 of 10) L1PA11|LINE|L1 71523 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chrX-940 chrX 46376465 46376675 + 12.4 0.000 Intergenic MIRb|SINE|MIR -48896 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr20-800 chr20 1830365 1830575 + 12.4 0.000 Intergenic Intergenic -50724 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr3-2324 chr3 129829776 129829986 + 12.4 0.000 intron (NM_001349263, intron 4 of 7) intron (NM_001349263, intron 4 of 7) -35269 NM_001349273 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr14-3036 chr14 57987150 57987360 + 12.4 0.000 Intergenic Intergenic -121163 NM_001306087 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr18-1269 chr18 58263853 58264063 + 12.4 0.000 intron (NM_001144965, intron 5 of 30) intron (NM_001144965, intron 5 of 30) 42387 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr1-5873 chr1 3060937 3061147 + 12.4 0.000 intron (NR_015440, intron 3 of 5) intron (NR_015440, intron 3 of 5) 6683 NR_024371 440556 Hs.531041 NM_198543 ENSG00000177133 PRDM16-DT LINC00982|lnc-dPrdm16 PRDM16 divergent transcript ncRNA chr16-1893 chr16 86635207 86635417 + 12.4 0.000 Intergenic Intergenic 56803 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr3-5403 chr3 158916425 158916635 + 12.4 0.000 Intergenic MER66-int|LTR|ERV1 114476 NR_110328 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr6-2361 chr6 134436277 134436487 + 12.4 0.000 intron (NR_125852, intron 4 of 4) intron (NR_125852, intron 4 of 4) -1334 NR_038217 154092 Hs.223718 NR_038216 LINC01010 - long intergenic non-protein coding RNA 1010 ncRNA chr8-2726 chr8 101170963 101171173 + 12.4 0.000 Intergenic Intergenic 34605 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr1-2954 chr1 92934758 92934968 + 12.4 0.000 intron (NM_001006605, intron 1 of 4) intron (NM_001006605, intron 1 of 4) 26599 NM_001006605 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr18-210 chr18 46917225 46917435 + 12.4 0.000 promoter-TSS (NM_001353901) promoter-TSS (NM_001353901) 177 NM_001324057 9063 Hs.57769 NM_004671 ENSG00000078043 PIAS2 ARIP3|DIP|MIZ1|PIASX|SIZ2|ZMIZ4 protein inhibitor of activated STAT 2 protein-coding chr14-2688 chr14 78859069 78859279 + 12.4 0.000 intron (NM_004796, intron 7 of 16) THE1D|LTR|ERVL-MaLR -340808 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr4-2877 chr4 75854502 75854712 + 12.4 0.000 Intergenic Intergenic 47845 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr1-3332 chr1 24868190 24868400 + 12.4 0.000 Intergenic Intergenic 51121 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr20-643 chr20 63855440 63855650 + 12.4 0.000 Intergenic Intergenic -5668 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr17-1267 chr17 50346430 50346640 + 12.4 0.000 intron (NR_110010, intron 1 of 9) CpG 409 NR_110010 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr19-2285 chr19 1693838 1694048 + 12.4 0.000 Intergenic Intergenic -41328 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr14-1423 chr14 69610626 69610836 + 12.4 0.000 promoter-TSS (NM_014734) promoter-TSS (NM_014734) -865 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr14-1676 chr14 73239640 73239850 + 12.4 0.000 promoter-TSS (NM_001365906) promoter-TSS (NM_001365906) -28 NM_001365907 89932 Hs.509909 NM_173462 ENSG00000100767 PAPLN PPN papilin, proteoglycan like sulfated glycoprotein protein-coding chr4-1659 chr4 123478901 123479111 + 12.4 0.000 Intergenic Intergenic 79466 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr13-1236 chr13 86699405 86699615 + 12.4 0.000 Intergenic L1PA11|LINE|L1 -212410 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr13-679 chr13 19782167 19782377 + 12.4 0.000 intron (NM_001042414, intron 2 of 9) CpG 673 NM_001354908 55269 Hs.213198 NM_001042414 ENSG00000121390 PSPC1 PSP1 paraspeckle component 1 protein-coding chr17-3213 chr17 4220739 4220949 + 12.4 0.000 intron (NR_047571, intron 2 of 23) intron (NR_047571, intron 2 of 23) 43003 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chrX-3410 chrX 10357700 10357910 + 12.4 0.000 Intergenic Intergenic 200830 NM_001830 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chr6-2479 chr6 48068027 48068237 + 12.4 0.000 intron (NM_207499, intron 1 of 2) intron (NM_207499, intron 1 of 2) 557 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr6-779 chr6 77463629 77463839 + 12.4 0.000 5' UTR (NM_000863, exon 1 of 1) 5' UTR (NM_000863, exon 1 of 1) 288 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr19-1843 chr19 10766681 10766891 + 12.4 0.000 intron (NM_001005362, intron 2 of 19) intron (NM_001005362, intron 2 of 19) -13468 NR_039903 100616425 NR_039903 ENSG00000265879 MIR4748 mir-4748 microRNA 4748 ncRNA chr1-5303 chr1 218459969 218460179 + 12.4 0.000 intron (NR_031644, intron 2 of 6) intron (NR_031644, intron 2 of 6) 17448 NR_125715 103611157 Hs.133379 NR_125715 ENSG00000281453 TGFB2-OT1 - TGFB2 overlapping transcript 1 ncRNA chr10-1823 chr10 450285 450495 + 12.4 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -178174 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr12-670 chr12 132828573 132828783 + 12.4 0.000 promoter-TSS (NM_005895) promoter-TSS (NM_005895) 191 NM_001172557 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr15-1091 chr15 57924527 57924737 + 12.4 0.000 Intergenic Intergenic 89391 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr5-2425 chr5 118497299 118497509 + 12.4 0.000 intron (NR_104610, intron 4 of 9) intron (NR_104610, intron 4 of 9) 64713 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chr8-701 chr8 57575235 57575445 + 12.4 0.000 Intergenic Intergenic -170809 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr7-2867 chr7 114925489 114925699 + 12.4 0.000 intron (NM_001166345, intron 2 of 4) MER102b|DNA|hAT-Charlie 3440 NM_199072 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chr4-1807 chr4 37803481 37803691 + 12.4 0.000 Intergenic Intergenic -23100 NM_018290 55276 Hs.23363 NM_018290 ENSG00000169299 PGM2 MSTP006 phosphoglucomutase 2 protein-coding chr3-1152 chr3 64023335 64023545 + 12.4 0.000 promoter-TSS (NM_001271781) promoter-TSS (NM_001271781) 32 NM_001271781 9861 Hs.152536 NM_014814 ENSG00000163636 PSMD6 Rpn7|S10|SGA-113M|p42A|p44S10 proteasome 26S subunit, non-ATPase 6 protein-coding chr2-2613 chr2 42801449 42801659 + 12.4 0.000 Intergenic Intergenic -8971 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr13-611 chr13 24450555 24450765 + 12.4 0.000 intron (NM_006437, intron 24 of 33) intron (NM_006437, intron 24 of 33) 62118 NM_006437 143 Hs.744855 NM_006437 ENSG00000102699 PARP4 ADPRTL1|ARTD4|PARP-4|PARPL|PH5P|VAULT3|VPARP|VWA5C|p193 poly(ADP-ribose) polymerase family member 4 protein-coding chr2-4570 chr2 80388434 80388644 + 12.4 0.000 intron (NM_001282599, intron 1 of 11) intron (NM_001282599, intron 1 of 11) 75160 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr16-1488 chr16 2874895 2875105 + 12.4 0.000 Intergenic Intergenic -8195 NM_001142499 114984 Hs.534525 NM_138439 ENSG00000162076 FLYWCH2 - FLYWCH family member 2 protein-coding chr15-3994 chr15 53736452 53736662 + 12.4 0.000 intron (NR_102334, intron 1 of 19) intron (NR_102334, intron 1 of 19) 23106 NM_182758 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr7-3300 chr7 43038346 43038556 + 12.4 0.000 Intergenic Intergenic -74196 NM_015052 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr10-5532 chr10 85503292 85503502 + 12.4 0.000 Intergenic L1P2|LINE|L1 53805 NR_120671 101929684 Hs.554059 NR_120671 ENSG00000230962 LINC01520 - long intergenic non-protein coding RNA 1520 ncRNA chr4-1752 chr4 128869853 128870063 + 12.4 0.000 intron (NM_001287442, intron 10 of 10) intron (NM_001287442, intron 10 of 10) 58114 NM_001287443 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr9-2634 chr9 22292429 22292639 + 12.4 0.000 Intergenic L1MA1|LINE|L1 -154290 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr21-499 chr21 28474090 28474300 + 12.4 0.000 Intergenic Intergenic -65123 NR_026553 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr16-1841 chr16 66036949 66037159 + 12.4 0.000 Intergenic Intergenic -329637 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr14-2216 chr14 103014543 103014753 + 12.4 0.000 intron (NM_006035, intron 1 of 36) intron (NM_006035, intron 1 of 36) 42901 NM_006035 9578 Hs.654634 NM_006035 ENSG00000198752 CDC42BPB MRCKB CDC42 binding protein kinase beta protein-coding chr13-762 chr13 102845514 102845724 + 12.4 0.000 promoter-TSS (NM_000123) promoter-TSS (NM_000123) -222 NM_000123 2073 Hs.258429 NM_000123 ENSG00000134899 ERCC5 COFS3|ERCC5-201|ERCM2|UVDR|XPG|XPGC ERCC excision repair 5, endonuclease protein-coding chr9-2190 chr9 133784368 133784578 + 12.4 0.000 intron (NM_001134398, intron 17 of 29) intron (NM_001134398, intron 17 of 29) -44518 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-2511 chr1 208030159 208030369 + 12.4 0.000 intron (NM_025179, intron 29 of 31) intron (NM_025179, intron 29 of 31) -119139 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr7-2197 chr7 100106124 100106334 + 12.4 0.000 TTS (NM_001365001) TTS (NM_001365001) -4289 NM_001278595 4176 Hs.438720 NM_005916 ENSG00000166508 MCM7 CDC47|MCM2|P1.1-MCM3|P1CDC47|P85MCM|PNAS146|PPP1R104 minichromosome maintenance complex component 7 protein-coding chr6-1532 chr6 43787501 43787711 + 12.4 0.000 Intergenic Intergenic 15638 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr10-896 chr10 104254787 104254997 + 12.4 0.000 promoter-TSS (NM_004832) promoter-TSS (NM_004832) 0 NM_004832 9446 Hs.190028 NM_004832 ENSG00000148834 GSTO1 GSTO 1-1|GSTTLp28|HEL-S-21|P28|SPG-R glutathione S-transferase omega 1 protein-coding chr5-5081 chr5 96026216 96026426 + 12.4 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) -52817 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr2-2080 chr2 218317520 218317730 + 12.4 0.000 intron (NM_015488, intron 2 of 9) intron (NM_015488, intron 2 of 9) -5554 NM_022572 25953 Hs.98475 NM_015488 ENSG00000127838 PNKD BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR-1S|MR1|PDC|PKND1|PNKD1|TAHCCP2 PNKD metallo-beta-lactamase domain containing protein-coding chr8-1409 chr8 52616431 52616641 + 12.4 0.000 Intergenic Intergenic -51106 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr1-9321 chr1 27521815 27522025 + 12.4 0.000 Intergenic Intergenic -31753 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr19-1899 chr19 46963209 46963419 + 12.4 0.000 intron (NM_004491, intron 3 of 6) intron (NM_004491, intron 3 of 6) -56523 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr22-1548 chr22 36317529 36317739 + 12.4 0.000 intron (NM_002473, intron 11 of 40) intron (NM_002473, intron 11 of 40) -30727 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr11-2559 chr11 103532475 103532685 + 12.4 0.000 Intergenic Intergenic -317326 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr11-3062 chr11 11175046 11175256 + 12.4 0.000 Intergenic Intergenic 178099 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chrX-3129 chrX 11391731 11391941 + 12.4 0.000 intron (NR_109776, intron 1 of 14) MER5A1|DNA|hAT-Charlie 35982 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr3-3124 chr3 149879919 149880129 + 12.4 0.000 intron (NM_183383, intron 3 of 8) intron (NM_183383, intron 3 of 8) 67336 NM_183383 11342 Hs.12333 NM_007282 ENSG00000082996 RNF13 EIEE73|RZF ring finger protein 13 protein-coding chr16-3287 chr16 88881400 88881610 + 12.4 0.000 intron (NM_175931, intron 7 of 10) CpG -2010 NR_135194 101927793 Hs.690953 NR_135194 ENSG00000259881 LOC101927793 - uncharacterized LOC101927793 ncRNA chr2-4160 chr2 178206289 178206499 + 12.4 0.000 intron (NM_001201480, intron 1 of 25) intron (NM_001201480, intron 1 of 25) 11882 NM_032523 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr6-1167 chr6 39934323 39934533 + 12.4 0.000 promoter-TSS (NM_001075098) promoter-TSS (NM_001075098) 34 NM_001358533 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr3-1499 chr3 126782053 126782263 + 12.4 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 77918 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr17-2477 chr17 67260613 67260823 + 12.4 0.000 intron (NR_136398, intron 3 of 3) intron (NR_136398, intron 3 of 3) -15522 NM_001330447 9931 Hs.370140 NM_014877 ENSG00000198265 HELZ DHRC|DRHC|HUMORF5 helicase with zinc finger protein-coding chr1-5011 chr1 67689507 67689717 + 12.4 0.000 Intergenic Intergenic 4411 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr4-2274 chr4 185265822 185266032 + 12.4 0.000 intron (NM_001317781, intron 4 of 18) intron (NM_001317781, intron 4 of 18) 61690 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr1-6801 chr1 88398302 88398512 + 12.4 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -285737 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chrX-574 chrX 58286805 58287015 + 12.4 0.000 Intergenic GSATX|Satellite|centr -376277 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr17-6977 chr17 49021741 49021951 + 12.4 0.000 intron (NM_001160423, intron 2 of 12) intron (NM_001160423, intron 2 of 12) 24461 NM_001160423 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chr5-1264 chr5 84384562 84384772 + 12.4 0.000 5' UTR (NM_005711, exon 1 of 11) 5' UTR (NM_005711, exon 1 of 11) 200 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr16-2662 chr16 61097097 61097307 + 12.4 0.000 Intergenic MLT1E1|LTR|ERVL-MaLR -41436 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr3-3805 chr3 15378311 15378521 + 12.4 0.000 Intergenic MER66C|LTR|ERV1 -37036 NM_001018009 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr14-573 chr14 73559756 73559966 + 12.4 0.000 promoter-TSS (NM_203309) promoter-TSS (NM_203309) -914 NM_203309 399671 Hs.660774 NM_203309 ENSG00000187105 HEATR4 - HEAT repeat containing 4 protein-coding chr3-2095 chr3 29430713 29430923 + 12.4 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 149506 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr2-3831 chr2 27298609 27298819 + 12.4 0.000 exon (NM_032546, exon 2 of 10) exon (NM_032546, exon 2 of 10) 9731 NM_003353 7349 Hs.534363 NM_003353 ENSG00000163794 UCN UI|UROC urocortin protein-coding chr11-6043 chr11 29159624 29159834 + 12.4 0.000 Intergenic Intergenic -434684 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr8-3230 chr8 139401764 139401974 + 12.4 0.000 Intergenic Intergenic 301254 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr3-4527 chr3 122285864 122286074 + 12.4 0.000 3' UTR (NM_000388, exon 7 of 7) 3' UTR (NM_000388, exon 7 of 7) -39279 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr18-802 chr18 63613523 63613733 + 12.4 0.000 Intergenic Intergenic 26285 NM_001348267 5275 Hs.241407 NM_012397 ENSG00000197641 SERPINB13 HSHUR7SEQ|HUR7|PI13|headpin serpin family B member 13 protein-coding chr1-3356 chr1 79006725 79006935 + 12.4 0.000 promoter-TSS (NM_022159) promoter-TSS (NM_022159) -100 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr11-1193 chr11 102047504 102047714 + 12.4 0.000 intron (NM_032930, intron 1 of 6) CpG 171 NM_001363505 85016 Hs.98328 NM_032930 ENSG00000137691 CFAP300 C11orf70|CILD38 cilia and flagella associated protein 300 protein-coding chr3-7020 chr3 171594108 171594318 + 12.4 0.000 Intergenic LTR16C|LTR|ERVL -133805 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr22-1170 chr22 31346804 31347014 + 12.4 0.000 promoter-TSS (NM_032052) promoter-TSS (NM_032052) 150 NR_120386 54944 Hs.648259 NM_017834 LINC01521 - long intergenic non-protein coding RNA 1521 ncRNA chr1-4175 chr1 29709832 29710042 + 12.4 0.000 Intergenic Intergenic 327675 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr12-3149 chr12 47504760 47504970 + 12.4 0.000 Intergenic Intergenic 89857 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr16-2223 chr16 88355543 88355753 + 12.4 0.000 Intergenic Intergenic -71823 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr16-2159 chr16 57590776 57590986 + 12.4 0.000 Intergenic MIR|SINE|MIR -28857 NM_001290142 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr20-1199 chr20 9646539 9646749 + 12.4 0.000 intron (NM_020341, intron 3 of 10) MLT1H2|LTR|ERVL-MaLR -131646 NR_109957 101929329 Hs.589878 NR_109957 ENSG00000225988 LAMP5-AS1 - LAMP5 antisense RNA 1 ncRNA chr1-4201 chr1 78370950 78371160 + 12.4 0.000 Intergenic Intergenic -119919 NM_001039585 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr5-2941 chr5 143985767 143985977 + 12.4 0.000 Intergenic L2a|LINE|L2 173711 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr5-640 chr5 81983302 81983512 + 12.4 0.000 intron (NM_001131028, intron 2 of 8) SVA_D|Retroposon|SVA 11384 NM_031482 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding chr1-1995 chr1 17632597 17632807 + 12.4 0.000 intron (NM_001319838, intron 6 of 17) intron (NM_001319838, intron 6 of 17) 14389 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr1-2425 chr1 3380024 3380234 + 12.4 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -74536 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr2-2830 chr2 101768714 101768924 + 12.4 0.000 intron (NM_145686, intron 2 of 30) intron (NM_145686, intron 2 of 30) 71112 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr2-7085 chr2 171620855 171621065 + 12.4 0.000 Intergenic LTR1C3|LTR|ERV1 -66509 NM_001271790 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr18-2062 chr18 47894675 47894885 + 12.4 0.000 intron (NM_001003652, intron 2 of 10) L2c|LINE|L2 35879 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr9-3438 chr9 136780857 136781067 + 12.4 0.000 Intergenic LTR5B|LTR|ERVK -10382 NM_032928 85014 Hs.356744 NM_032928 ENSG00000244187 TMEM141 - transmembrane protein 141 protein-coding chr11-1941 chr11 104969042 104969252 + 12.4 0.000 promoter-TSS (NM_033306) promoter-TSS (NM_033306) -573 NM_001225 837 Hs.138378 NM_001225 ENSG00000196954 CASP4 ICE(rel)II|ICEREL-II|ICH-2|Mih1|Mih1/TX|TX caspase 4 protein-coding chr19-3785 chr19 3255982 3256192 + 12.4 0.000 intron (NR_033342, intron 2 of 12) intron (NR_033342, intron 2 of 12) 30809 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr2-2674 chr2 234250016 234250226 + 12.4 0.000 Intergenic Intergenic 199419 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr14-942 chr14 31435318 31435528 + 12.4 0.000 intron (NR_110045, intron 2 of 3) intron (NR_110045, intron 2 of 3) 14665 NR_110045 101927124 Hs.647561 NR_110045 ENSG00000250365 LOC101927124 - uncharacterized LOC101927124 ncRNA chr5-3095 chr5 40385734 40385944 + 12.4 0.000 Intergenic Intergenic -294076 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr1-5692 chr1 52352446 52352656 + 12.4 0.000 3' UTR (NM_001330585, exon 25 of 25) 3' UTR (NM_001330585, exon 25 of 25) 13654 NM_001330585 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr10-2174 chr10 128124732 128124942 + 12.4 0.000 intron (NM_001145966, intron 2 of 13) intron (NM_001145966, intron 2 of 13) 1586 NM_001145966 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chr9-2516 chr9 113343947 113344157 + 12.4 0.000 Intergenic Intergenic -3777 NM_001012361 114987 Hs.133331 NM_145241 ENSG00000148225 WDR31 - WD repeat domain 31 protein-coding chr1-2920 chr1 27166329 27166539 + 12.4 0.000 Intergenic L2a|LINE|L2 -11309 NR_046474 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr3-2822 chr3 13896520 13896730 + 12.4 0.000 Intergenic Intergenic -16554 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding chr4-1888 chr4 7495656 7495866 + 12.4 0.000 intron (NM_020777, intron 2 of 26) intron (NM_020777, intron 2 of 26) 35733 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr1-2541 chr1 6497541 6497751 + 12.4 0.000 promoter-TSS (NM_001265592) promoter-TSS (NM_001265592) -202 NM_001042663 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr22-1291 chr22 39310055 39310265 + 12.4 0.000 Intergenic AluJb|SINE|Alu 3751 NR_000028 116938 NR_000028 ENSG00000209480 SNORD83B RNU83B|U83B small nucleolar RNA, C/D box 83B snoRNA chr9-2023 chr9 136130293 136130503 + 12.4 0.000 Intergenic Intergenic -11523 NM_152833 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr20-1058 chr20 11778106 11778316 + 12.4 0.000 Intergenic Intergenic 92504 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr19-1802 chr19 1077332 1077542 + 12.4 0.000 5' UTR (NM_001282334, exon 1 of 13) 5' UTR (NM_001282334, exon 1 of 13) 803 NM_001282334 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr2-4031 chr2 107669446 107669656 + 12.4 0.000 Intergenic MER20|DNA|hAT-Charlie -84561 NR_126370 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chr12-1193 chr12 100279765 100279975 + 12.4 0.000 intron (NM_017988, intron 1 of 17) L1MEc|LINE|L1 12486 NM_001330253 55681 Hs.506481 NM_017988 ENSG00000136021 SCYL2 CVAK104 SCY1 like pseudokinase 2 protein-coding chr1-5794 chr1 177354573 177354783 + 12.4 0.000 intron (NR_126001, intron 1 of 3) intron (NR_126001, intron 1 of 3) 3092 NR_126001 102724661 Hs.146628 NR_126001 LINC01645 - long intergenic non-protein coding RNA 1645 ncRNA chr17-2635 chr17 5584892 5585102 + 12.4 0.000 promoter-TSS (NM_001033053) promoter-TSS (NM_001033053) -488 NM_033004 22861 Hs.652273 NM_014922 ENSG00000091592 NLRP1 AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family pyrin domain containing 1 protein-coding chr19-2727 chr19 34047766 34047976 + 12.4 0.000 Intergenic AluYc|SINE|Alu -124633 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr8-4458 chr8 115802466 115802676 + 12.4 0.000 Intergenic Intergenic -133596 NM_014112 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr6-1983 chr6 2941001 2941211 + 12.4 0.000 Intergenic FLAM_A|SINE|Alu 21024 NM_001271825 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr12-1536 chr12 87509491 87509701 + 12.4 0.000 Intergenic L2a|LINE|L2 178857 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr12-910 chr12 6829378 6829588 + 12.4 0.000 intron (NM_014262, intron 1 of 14) intron (NM_014262, intron 1 of 14) 1076 NM_014262 10536 Hs.631655 NM_014262 ENSG00000110811 P3H3 GRCB|HSU47926|LEPREL2 prolyl 3-hydroxylase 3 protein-coding chr15-1031 chr15 92845193 92845403 + 12.4 0.000 Intergenic Intergenic -37545 NR_037600 100507217 Hs.622504 NR_037600 LINC01578 - long intergenic non-protein coding RNA 1578 ncRNA chr4-2340 chr4 181266548 181266758 + 12.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -1624 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr6-1723 chr6 36360485 36360695 + 12.4 0.000 intron (NM_001207035, intron 7 of 7) intron (NM_001207035, intron 7 of 7) -23702 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chr8-977 chr8 116649805 116650015 + 12.4 0.000 intron (NM_003756, intron 5 of 7) L2b|LINE|L2 -2190 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr6-3619 chr6 111503236 111503446 + 12.4 0.000 non-coding (NR_034111, exon 4 of 4) non-coding (NR_034111, exon 4 of 4) -19626 NM_001286432 5980 Hs.232021 NM_002912 ENSG00000009413 REV3L POLZ|REV3 REV3 like, DNA directed polymerase zeta catalytic subunit protein-coding chr10-2781 chr10 127511828 127512038 + 12.4 0.000 Intergenic THE1B|LTR|ERVL-MaLR -37416 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr6-1392 chr6 111468756 111468966 + 12.4 0.000 intron (NM_001286431, intron 3 of 34) intron (NM_001286431, intron 3 of 34) -14611 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr5-2181 chr5 134528522 134528732 + 12.4 0.000 intron (NM_015288, intron 1 of 10) intron (NM_015288, intron 1 of 10) 2519 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr9-3740 chr9 121055779 121055989 + 12.4 0.000 intron (NM_001317163, intron 1 of 40) L1M1|LINE|L1 -5608 NM_001735 727 Hs.494997 NM_001735 ENSG00000106804 C5 C5D|C5a|C5b|CPAMD4|ECLZB complement C5 protein-coding chr2-3070 chr2 106194502 106194712 + 12.4 0.000 promoter-TSS (NM_001253875) promoter-TSS (NM_001253875) -268 NM_001253875 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr14-2741 chr14 100333990 100334200 + 12.4 0.000 3' UTR (NM_173701, exon 11 of 11) 3' UTR (NM_173701, exon 11 of 11) 10756 NM_207117 283600 Hs.108268 NM_207117 ENSG00000140107 SLC25A47 C14orf68|HDMCP|HMFN1655 solute carrier family 25 member 47 protein-coding chr21-973 chr21 45914530 45914740 + 12.4 0.000 intron (NM_001348241, intron 11 of 16) intron (NM_001348241, intron 11 of 16) -58335 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr10-3559 chr10 78977695 78977905 + 12.4 0.000 intron (NR_015429, intron 3 of 7) L2c|LINE|L2 89648 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr5-1642 chr5 159148918 159149128 + 12.4 0.000 Intergenic Intergenic 48540 NR_109890 101927740 Hs.738721 NR_109890 ENSG00000245812 LINC02202 - long intergenic non-protein coding RNA 2202 ncRNA chr20-973 chr20 44990698 44990908 + 12.4 0.000 intron (NM_001352385, intron 5 of 11) HAL1|LINE|L1 24291 NR_147974 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding chr12-1736 chr12 49403994 49404204 + 12.4 0.000 intron (NM_001293285, intron 3 of 14) L2c|LINE|L2 14925 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr2-6592 chr2 234521637 234521847 + 12.4 0.000 Intergenic Intergenic -24661 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr10-2132 chr10 24483758 24483968 + 12.4 0.000 intron (NM_001282770, intron 2 of 11) intron (NM_001282770, intron 2 of 11) 17332 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr13-779 chr13 37225536 37225746 + 12.4 0.000 Intergenic L1MC1|LINE|L1 -119977 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr12-2370 chr12 19249337 19249547 + 12.4 0.000 intron (NM_001256787, intron 1 of 25) MER44B|DNA|TcMar-Tigger 44117 NM_001256787 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr1-9137 chr1 18808671 18808881 + 12.4 0.000 Intergenic Intergenic 50885 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr14-2665 chr14 72388196 72388406 + 12.4 0.000 intron (NM_001370288, intron 3 of 16) intron (NM_001370288, intron 3 of 16) -128519 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr1-5403 chr1 10731057 10731267 + 12.4 0.000 intron (NM_001079843, intron 2 of 20) Charlie1a|DNA|hAT-Charlie 65484 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr5-3347 chr5 136190523 136190733 + 12.4 0.000 TTS (NM_001350994) TTS (NM_001350994) 2534 NM_001350994 389332 Hs.127680 NM_001350994 ENSG00000271824 SMIM32 - small integral membrane protein 32 protein-coding chr2-1257 chr2 23926123 23926333 + 12.4 0.000 intron (NR_125717, intron 1 of 28) intron (NR_125717, intron 1 of 28) 895 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr5-750 chr5 93078709 93078919 + 12.4 0.000 Intergenic Intergenic 492529 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr4-1884 chr4 5038137 5038347 + 12.4 0.000 Intergenic L2c|LINE|L2 -13238 NM_001306082 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr9-1462 chr9 33140011 33140221 + 12.4 0.000 intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -26832 NR_108110 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr17-2446 chr17 30530794 30531004 + 12.4 0.000 Intergenic Intergenic -45566 NR_015341 107133515 Hs.568209 NR_015341 SMURF2P1-LRRC37BP1 - SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene pseudo chr3-3377 chr3 47571951 47572161 + 12.4 0.000 intron (NM_006574, intron 3 of 4) intron (NM_006574, intron 3 of 4) 6809 NM_001206943 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr4-2321 chr4 123206276 123206486 + 12.4 0.000 intron (NM_001345856, intron 14 of 15) intron (NM_001345856, intron 14 of 15) -190414 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr15-3049 chr15 60318335 60318545 + 12.4 0.000 Intergenic Intergenic 79546 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr13-1308 chr13 97391231 97391441 + 12.4 0.000 exon (NM_001306070, exon 8 of 8) exon (NM_001306070, exon 8 of 8) -42833 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr10-1867 chr10 88892470 88892680 + 12.4 0.000 intron (NM_020799, intron 1 of 10) intron (NM_020799, intron 1 of 10) 12330 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr1-5426 chr1 30779797 30780007 + 12.4 0.000 Intergenic MIRb|SINE|MIR -22128 NM_006762 7805 Hs.371021 NM_006762 ENSG00000162511 LAPTM5 CLAST6 lysosomal protein transmembrane 5 protein-coding chr22-1437 chr22 45584795 45585005 + 12.4 0.000 intron (NM_006486, intron 16 of 16) intron (NM_006486, intron 16 of 16) 20747 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr10-3808 chr10 132595915 132596125 + 12.4 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 58233 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr6-1121 chr6 141925121 141925331 + 12.4 0.000 Intergenic ERVL-E-int|LTR|ERVL 163573 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr11-3131 chr11 44902498 44902708 + 12.4 0.000 intron (NM_130783, intron 3 of 9) MamRep1894|DNA|hAT 47557 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr18-830 chr18 9916491 9916701 + 12.4 0.000 intron (NM_194434, intron 1 of 5) intron (NM_194434, intron 1 of 5) 2580 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr11-3707 chr11 9280853 9281063 + 12.4 0.000 non-coding (NR_028491, exon 8 of 8) non-coding (NR_028491, exon 8 of 8) -15608 NM_001243254 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr1-6528 chr1 27547256 27547466 + 12.4 0.000 exon (NM_001029882, exon 6 of 7) exon (NM_001029882, exon 6 of 7) 56133 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr16-3119 chr16 70590041 70590251 + 12.4 0.000 intron (NM_152456, intron 1 of 6) intron (NM_152456, intron 1 of 6) 10247 NM_001172771 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr6-1106 chr6 108200876 108201086 + 12.4 0.000 Intergenic Intergenic 32958 NM_001286102 7101 Hs.157688 NM_003269 ENSG00000112333 NR2E1 TLL|TLX|XTLL nuclear receptor subfamily 2 group E member 1 protein-coding chr1-9466 chr1 35954826 35955036 + 12.4 0.000 intron (NM_177422, intron 2 of 16) Tigger3a|DNA|TcMar-Tigger 23826 NM_177422 192669 Hs.657659 NM_024852 ENSG00000126070 AGO3 EIF2C3 argonaute RISC catalytic component 3 protein-coding chr17-4405 chr17 33452152 33452362 + 12.4 0.000 intron (NM_001094, intron 1 of 9) MIRb|SINE|MIR 81503 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr2-2745 chr2 172968292 172968502 + 12.4 0.000 intron (NM_001282901, intron 4 of 24) intron (NM_001282901, intron 4 of 24) 40192 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chrX-852 chrX 130879031 130879241 + 12.4 0.000 intron (NM_006375, intron 2 of 14) intron (NM_006375, intron 2 of 14) 24181 NM_001281736 10495 Hs.171458 NM_006375 ENSG00000165675 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding chrX-1232 chrX 85994103 85994313 + 12.4 0.000 intron (NM_001320959, intron 2 of 14) MIRb|SINE|MIR 53098 NM_001362518 1121 Hs.496449 NM_000390 ENSG00000188419 CHM DXS540|GGTA|HSD-32|REP-1|TCD CHM Rab escort protein protein-coding chr12-1103 chr12 132955221 132955431 + 12.4 0.000 intron (NM_183238, intron 1 of 4) MER92B|LTR|ERV1 980 NM_183238 100289635 Hs.29698 NM_183238 ENSG00000196458 ZNF605 - zinc finger protein 605 protein-coding chr14-973 chr14 69673744 69673954 + 12.4 0.000 intron (NM_014734, intron 2 of 5) intron (NM_014734, intron 2 of 5) 62253 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr6-2172 chr6 27617101 27617311 + 12.4 0.000 Intergenic Intergenic -76829 NR_038293 100507173 Hs.635987 NR_038292 ENSG00000281706 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA chr10-1552 chr10 104441559 104441769 + 12.4 0.000 intron (NM_001008723, intron 15 of 17) intron (NM_001008723, intron 15 of 17) 38611 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr3-5204 chr3 74733963 74734173 + 12.4 0.000 Intergenic Intergenic -212928 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr3-2573 chr3 113079486 113079696 + 12.4 0.000 Intergenic Intergenic -59920 NM_001319109 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr16-2241 chr16 90033655 90033865 + 12.4 0.000 intron (NM_001286208, intron 4 of 9) intron (NM_001286208, intron 4 of 9) -3859 NR_122031 750 Hs.633032 NM_001214 ENSG00000221819 GAS8-AS1 C16orf3 GAS8 antisense RNA 1 ncRNA chr19-1603 chr19 35154059 35154269 + 12.4 0.000 promoter-TSS (NM_001320912) promoter-TSS (NM_001320912) -571 NM_001164605 53827 Hs.333418 NM_014164 ENSG00000089327 FXYD5 DYSAD|HSPC113|IWU1|KCT1|OIT2|PRO6241|RIC FXYD domain containing ion transport regulator 5 protein-coding chr8-2050 chr8 118075004 118075214 + 12.4 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 36710 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding GL000225.1-22 GL000225.1 73608 73818 + 12.4 0.000 NA NA NA NA chr1-9738 chr1 54160955 54161165 + 12.4 0.000 Intergenic MIRc|SINE|MIR -7879 NM_201546 200008 NM_201546 ENSG00000157211 CDCP2 - CUB domain containing protein 2 protein-coding chr22-851 chr22 24554427 24554637 + 12.4 0.000 intron (NM_001284252, intron 1 of 5) intron (NM_001284252, intron 1 of 5) 606 NM_031444 83606 Hs.9850 NM_031444 ENSG00000138867 GUCD1 C22orf13|LLN4 guanylyl cyclase domain containing 1 protein-coding chr1-9822 chr1 60596291 60596501 + 12.4 0.000 intron (NR_146508, intron 2 of 7) MLT1F2|LTR|ERVL-MaLR 26289 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr8-5636 chr8 104712767 104712977 + 12.4 0.000 Intergenic Intergenic -123848 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr6-1344 chr6 36615139 36615349 + 12.4 0.000 Intergenic AluJo|SINE|Alu 7268 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr8-2778 chr8 119378652 119378862 + 12.4 0.000 Intergenic L1PA7|LINE|L1 -37689 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr15-1194 chr15 41512437 41512647 + 12.4 0.000 intron (NM_001135685, intron 3 of 17) CpG-8132 1285 NM_206961 4058 Hs.434481 NM_002344 ENSG00000062524 LTK TYK1 leukocyte receptor tyrosine kinase protein-coding chr2-2537 chr2 199303924 199304134 + 12.4 0.000 intron (NM_001172509, intron 10 of 10) intron (NM_001172509, intron 10 of 10) 153910 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr8-2135 chr8 144538115 144538325 + 12.4 0.000 intron (NM_025251, intron 5 of 10) intron (NM_025251, intron 5 of 10) -9109 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr1-6239 chr1 225671052 225671262 + 12.4 0.000 Intergenic MLT2A2|LTR|ERVL -18034 NM_001008493 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr18-1545 chr18 22783959 22784169 + 12.4 0.000 intron (NR_110782, intron 1 of 1) L1PA10|LINE|L1 2773 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr6-2596 chr6 106698248 106698458 + 12.4 0.000 intron (NR_149100, intron 2 of 2) MER20|DNA|hAT-Charlie 2868 NR_149100 105377926 Hs.635821 NR_149100 ENSG00000229654 LINC02526 - long intergenic non-protein coding RNA 2526 ncRNA chr7-2769 chr7 66030958 66031168 + 12.4 0.000 Intergenic Intergenic -44756 NM_001024944 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr4-2232 chr4 147597289 147597499 + 12.4 0.000 Intergenic Intergenic -20003 NM_018241 55751 Hs.203896 NM_018241 ENSG00000164168 TMEM184C TMEM34 transmembrane protein 184C protein-coding chr3-2754 chr3 140501726 140501936 + 12.4 0.000 intron (NM_022131, intron 8 of 16) MER5A1|DNA|hAT-Charlie 6958 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr11-2478 chr11 64661226 64661436 + 12.4 0.000 intron (NM_015080, intron 9 of 22) intron (NM_015080, intron 9 of 22) -17786 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr10-2330 chr10 63515623 63515833 + 12.4 0.000 intron (NM_001322258, intron 1 of 24) L1MC1|LINE|L1 -5673 NM_001001330 221035 Hs.499833 NM_001001330 ENSG00000165476 REEP3 C10orf74|Yip2b receptor accessory protein 3 protein-coding chr6-289 chr6 75601711 75601921 + 12.4 0.000 promoter-TSS (NM_015571) promoter-TSS (NM_015571) -64 NM_001100409 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding chr9-2940 chr9 136238201 136238411 + 12.4 0.000 intron (NM_181701, intron 1 of 11) intron (NM_181701, intron 1 of 11) 7535 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr19-2490 chr19 5295320 5295530 + 12.4 0.000 intron (NM_002850, intron 1 of 37) intron (NM_002850, intron 1 of 37) 45387 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr6-1662 chr6 155936476 155936686 + 12.4 0.000 Intergenic Intergenic -10216 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr10-2549 chr10 63145875 63146085 + 12.4 0.000 intron (NM_001282405, intron 1 of 2) intron (NM_001282405, intron 1 of 2) 12652 NM_030759 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr7-1625 chr7 19537920 19538130 + 12.4 0.000 Intergenic Intergenic 167411 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr1-5352 chr1 234398869 234399079 + 12.4 0.000 intron (NM_005646, intron 25 of 29) MIRb|SINE|MIR 25273 NM_001301733 388753 Hs.23198 NM_001012985 ENSG00000168275 COA6 C1orf31|CEMCOX4 cytochrome c oxidase assembly factor 6 protein-coding chr4-2166 chr4 95106216 95106426 + 12.4 0.000 intron (NM_001256792, intron 2 of 10) L2|LINE|L2 14830 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr7-869 chr7 92246262 92246472 + 12.4 0.000 promoter-TSS (NM_001350697) promoter-TSS (NM_001350697) -267 NM_001350682 889 Hs.531987 NM_004912 ENSG00000001631 KRIT1 CAM|CCM1 KRIT1 ankyrin repeat containing protein-coding chr5-2271 chr5 35799749 35799959 + 12.4 0.000 intron (NM_024867, intron 33 of 36) MamRep605|LTR?|LTR? -57037 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr3-7214 chr3 192586161 192586371 + 12.4 0.000 intron (NM_004113, intron 2 of 5) intron (NM_004113, intron 2 of 5) 71244 NR_046598 100873987 Hs.628012 NR_046598 ENSG00000230126 FGF12-AS2 - FGF12 antisense RNA 2 ncRNA chr17-4096 chr17 80704410 80704620 + 12.4 0.000 intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 101117 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr12-781 chr12 11508756 11508966 + 12.4 0.000 Intergenic Intergenic -22183 NR_148969 440084 Hs.121321 NR_148969 LOC440084 - uncharacterized LOC440084 ncRNA chr11-1886 chr11 12044245 12044455 + 12.4 0.000 intron (NR_135109, intron 1 of 1) intron (NR_135109, intron 1 of 1) 13475 NR_135109 105376554 Hs.523483 NR_135109 ENSG00000254486 LINC02547 - long intergenic non-protein coding RNA 2547 ncRNA chr7-993 chr7 101378949 101379159 + 12.4 0.000 intron (NM_133457, intron 1 of 12) intron (NM_133457, intron 1 of 12) 16179 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chrX-1288 chrX 113034258 113034468 + 12.4 0.000 Intergenic L1MA2|LINE|L1 -8364 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr14-1566 chr14 73209937 73210147 + 12.4 0.000 intron (NM_000021, intron 9 of 11) MER20B|DNA|hAT-Charlie -27464 NR_158677 89932 Hs.509909 NM_173462 ENSG00000100767 PAPLN PPN papilin, proteoglycan like sulfated glycoprotein protein-coding chr16-2396 chr16 69040602 69040812 + 12.4 0.000 intron (NM_024562, intron 17 of 17) intron (NM_024562, intron 17 of 17) -64946 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr2-2539 chr2 201580829 201581039 + 12.4 0.000 intron (NM_001168221, intron 5 of 15) L1MEb|LINE|L1 38244 NM_001168217 151254 Hs.335788 NM_152525 ENSG00000155754 C2CD6 ALS2CR11 C2 calcium dependent domain containing 6 protein-coding chr11-4155 chr11 47268397 47268607 + 12.4 0.000 promoter-TSS (NM_130470) promoter-TSS (NM_130470) -873 NM_130470 8567 Hs.82548 NM_003682 ENSG00000110514 MADD DENN|IG20|RAB3GEP MAP kinase activating death domain protein-coding chr16-1976 chr16 85627794 85628004 + 12.4 0.000 intron (NM_001278184, intron 1 of 14) intron (NM_001278184, intron 1 of 14) 14577 NM_001278184 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr6-2053 chr6 95542978 95543188 + 12.4 0.000 Intergenic Intergenic 34368 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr4-952 chr4 184538111 184538321 + 12.4 0.000 promoter-TSS (NR_147158) promoter-TSS (NR_147158) -633 NR_147158 105377585 Hs.519127 NR_147158 ENSG00000271538 LINC02427 - long intergenic non-protein coding RNA 2427 ncRNA chr10-3798 chr10 132190072 132190282 + 12.4 0.000 intron (NM_006426, intron 1 of 13) intron (NM_006426, intron 1 of 13) 3229 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr15-2223 chr15 94692758 94692968 + 12.4 0.000 Intergenic Intergenic -162500 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr2-3372 chr2 6865674 6865884 + 12.4 0.000 promoter-TSS (NM_207315) promoter-TSS (NM_207315) 40 NM_001256477 129607 Hs.7155 NM_207315 ENSG00000134326 CMPK2 NDK|TMPK2|TYKi|UMP-CMPK2 cytidine/uridine monophosphate kinase 2 protein-coding chr3-2453 chr3 55192186 55192396 + 12.4 0.000 Intergenic Intergenic 14119 NR_147142 105377096 Hs.640507 NR_147142 ENSG00000243572 LINC02017 - long intergenic non-protein coding RNA 2017 ncRNA chr2-4083 chr2 132671473 132671683 + 12.4 0.000 promoter-TSS (NM_001077427) promoter-TSS (NM_001077427) -52 NM_001077427 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr12-5051 chr12 89343246 89343456 + 12.4 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 9150 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr4-5018 chr4 139576197 139576407 + 12.4 0.000 Intergenic Intergenic -19533 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr6-1500 chr6 144036218 144036428 + 12.4 0.000 intron (NM_001289040, intron 1 of 5) intron (NM_001289040, intron 1 of 5) 18939 NM_001317159 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr22-1945 chr22 47182047 47182257 + 12.4 0.000 Intergenic L1MA1|LINE|L1 -163419 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr13-642 chr13 23433375 23433585 + 12.4 0.000 intron (NM_014363, intron 1 of 9) intron (NM_014363, intron 1 of 9) 222 NM_014363 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr1-3302 chr1 2021358 2021568 + 12.4 0.000 intron (NM_000815, intron 1 of 8) intron (NM_000815, intron 1 of 8) 2118 NM_000815 2563 Hs.113882 NM_000815 ENSG00000187730 GABRD EIG10|EJM7|GEFSP5 gamma-aminobutyric acid type A receptor delta subunit protein-coding chr22-1129 chr22 41181815 41182025 + 12.4 0.000 Intergenic Intergenic 15581 NR_110514 101927279 Hs.517517 NR_110514 EP300-AS1 - EP300 antisense RNA 1 ncRNA chr12-2985 chr12 117377679 117377889 + 12.4 0.000 Intergenic L2b|LINE|L2 -15982 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr3-7311 chr3 27066090 27066300 + 12.4 0.000 Intergenic MSTA|LTR|ERVL-MaLR 150328 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr6-2034 chr6 56747252 56747462 + 12.4 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 96308 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6-1252 chr6 21163417 21163627 + 12.4 0.000 intron (NM_017774, intron 13 of 15) intron (NM_017774, intron 13 of 15) 348370 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr4-2220 chr4 140072046 140072256 + 12.4 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -55864 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr17-2693 chr17 50640808 50641018 + 12.4 0.000 intron (NM_003786, intron 1 of 30) intron (NM_003786, intron 1 of 30) 6032 NM_001144070 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr1-3661 chr1 108586045 108586255 + 12.4 0.000 intron (NM_001010883, intron 1 of 10) intron (NM_001010883, intron 1 of 10) 26050 NM_001010883 284611 Hs.200230 NM_001010883 ENSG00000162636 FAM102B SYM-3B family with sequence similarity 102 member B protein-coding chr7-3904 chr7 116727337 116727547 + 12.4 0.000 intron (NM_000245, intron 2 of 20) MIRb|SINE|MIR 55246 NM_001324401 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr1-3130 chr1 54810518 54810728 + 12.4 0.000 intron (NM_001110533, intron 4 of 9) intron (NM_001110533, intron 4 of 9) 4560 NM_001110533 163747 Hs.376018 NM_152607 ENSG00000162398 LEXM C1orf177|LEM lymphocyte expansion molecule protein-coding chr13-1085 chr13 75767722 75767932 + 12.4 0.000 intron (NM_005358, intron 5 of 29) MIRb|SINE|MIR 7166 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr8-3071 chr8 19149156 19149366 + 12.4 0.000 Intergenic HERV16-int|LTR|ERVL 96261 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr11-2194 chr11 12841400 12841610 + 12.4 0.000 intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 148043 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr10-2593 chr10 74034941 74035151 + 12.4 0.000 intron (NM_014000, intron 1 of 21) intron (NM_014000, intron 1 of 21) 36930 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr8-1044 chr8 141059999 141060209 + 12.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -58025 NM_001352699 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr18-708 chr18 7566516 7566726 + 12.4 0.000 promoter-TSS (NM_001105244) promoter-TSS (NM_001105244) -695 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr11-4619 chr11 11207631 11207841 + 12.4 0.000 Intergenic Intergenic 145514 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr8-2959 chr8 54493243 54493453 + 12.4 0.000 Intergenic L2a|LINE|L2 35413 NM_022454 64321 Hs.98367 NM_022454 ENSG00000164736 SOX17 VUR3 SRY-box transcription factor 17 protein-coding chr16-2958 chr16 8842922 8843132 + 12.4 0.000 intron (NM_000303, intron 7 of 7) HERVH-int|LTR|ERV1 -6442 NR_147908 100130283 Hs.735515 NR_147908 LOC100130283 - uncharacterized LOC100130283 ncRNA chr8-3789 chr8 26245600 26245810 + 12.4 0.000 Intergenic Intergenic -45803 NM_002717 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr7-916 chr7 148698874 148699084 + 12.4 0.000 promoter-TSS (NM_001370664) promoter-TSS (NM_001370664) 76 NM_003592 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr8-2423 chr8 98049798 98050008 + 12.4 0.000 Intergenic L1ME4b|LINE|L1 -4358 NM_000989 6156 Hs.400295 NM_000989 ENSG00000156482 RPL30 L30 ribosomal protein L30 protein-coding chr1-4372 chr1 153905595 153905805 + 12.4 0.000 intron (NM_020699, intron 1 of 10) FLAM_A|SINE|Alu 17272 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr19-1901 chr19 47545294 47545504 + 12.4 0.000 exon (NM_001277075, exon 5 of 17) exon (NM_001277075, exon 5 of 17) 27749 NM_001277075 84215 Hs.14161 NM_032255 ENSG00000118156 ZNF541 - zinc finger protein 541 protein-coding chr9-4158 chr9 5229351 5229561 + 12.4 0.000 Intergenic HERVK22-int|LTR|ERVK -1963 NM_002195 3641 Hs.418506 NM_002195 ENSG00000120211 INSL4 EPIL|PLACENTIN insulin like 4 protein-coding chr1-6672 chr1 51063040 51063250 + 12.4 0.000 Intergenic L1M4|LINE|L1 3127 NR_106754 102466656 NR_106754 ENSG00000275816 MIR6500 hsa-mir-6500 microRNA 6500 ncRNA chr5-3325 chr5 131533890 131534100 + 12.4 0.000 intron (NM_016340, intron 6 of 27) intron (NM_016340, intron 6 of 27) 101234 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr17-3449 chr17 32103521 32103731 + 12.4 0.000 Intergenic Intergenic -38828 NM_001288758 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding chr6-3259 chr6 149855441 149855651 + 12.4 0.000 intron (NM_032832, intron 1 of 6) PABL_B|LTR|ERV1 -7952 NR_045126 100652739 Hs.642734 NR_045126 ENSG00000223701 RAET1E-AS1 RAET1G-AS1 RAET1E antisense RNA 1 ncRNA chr1-3798 chr1 12556523 12556733 + 12.4 0.000 Intergenic Intergenic 22395 NR_106788 102466722 NR_106788 ENSG00000276830 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA chr1-4824 chr1 22904864 22905074 + 12.4 0.000 intron (NM_004442, intron 9 of 15) intron (NM_004442, intron 9 of 15) -41743 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr4-5064 chr4 143424418 143424628 + 12.4 0.000 intron (NM_207123, intron 2 of 10) intron (NM_207123, intron 2 of 10) 81063 NR_036091 100423017 NR_036091 ENSG00000265623 MIR3139 - microRNA 3139 ncRNA chr2-11210 chr2 159879039 159879249 + 12.4 0.000 intron (NM_002349, intron 9 of 34) intron (NM_002349, intron 9 of 34) 25612 NM_002349 4065 Hs.153563 NM_002349 ENSG00000054219 LY75 CD205|CLEC13B|DEC-205|GP200-MR6|LY-75 lymphocyte antigen 75 protein-coding chr7-4454 chr7 130867810 130868020 + 12.4 0.000 Intergenic Intergenic 8895 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr2-6367 chr2 105735255 105735465 + 12.4 0.000 Intergenic Intergenic -9552 NM_003581 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr4-777 chr4 128812182 128812392 + 12.4 0.000 intron (NM_001287443, intron 1 of 10) CpG 443 NM_001287443 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr20-570 chr20 32067397 32067607 + 12.4 0.000 intron (NM_001172132, intron 2 of 13) intron (NM_001172132, intron 2 of 13) 15260 NM_001172129 3055 Hs.655210 NM_002110 ENSG00000101336 HCK JTK9|p59Hck|p61Hck HCK proto-oncogene, Src family tyrosine kinase protein-coding chr4-1962 chr4 138308294 138308504 + 12.4 0.000 Intergenic Intergenic -1312 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr14-793 chr14 69464538 69464748 + 12.4 0.000 Intergenic MER77B|LTR|ERVL -20085 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr17-3421 chr17 14029866 14030076 + 12.4 0.000 non-coding (NR_049718, exon 3 of 3) non-coding (NR_049718, exon 3 of 3) 5473 NR_003261 94158 Hs.633073 NR_003261 CDRT15P1 CDRT15P CMT1A duplicated region transcript 15 pseudogene 1 pseudo chr22-482 chr22 41565472 41565682 + 12.4 0.000 intron (NM_014460, intron 1 of 3) AluJb|SINE|Alu 4567 NM_014460 27254 Hs.310893 NM_014460 ENSG00000172346 CSDC2 PIPPIN|dJ347H13.2 cold shock domain containing C2 protein-coding chr11-1381 chr11 118530996 118531206 + 12.4 0.000 promoter-TSS (NM_032780) promoter-TSS (NM_032780) -7 NR_120576 101929089 Hs.666633 NR_120572 ENSG00000255435 LOC101929089 - uncharacterized LOC101929089 ncRNA chr14-641 chr14 77638817 77639027 + 12.4 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -22155 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr5-1254 chr5 36502707 36502917 + 12.4 0.000 Intergenic Intergenic -103543 NM_001289939 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr4-4634 chr4 80604961 80605171 + 12.4 0.000 intron (NM_152770, intron 3 of 5) MamGypLTR2c|LTR|Gypsy 269346 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr14-442 chr14 25050068 25050278 + 12.4 0.000 promoter-TSS (NM_014178) promoter-TSS (NM_014178) 124 NM_001304476 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr22-1923 chr22 46257973 46258183 + 12.4 0.000 exon (NM_006071, exon 1 of 1) exon (NM_006071, exon 1 of 1) 5265 NM_006071 10343 Hs.241383 NM_006071 ENSG00000130943 PKDREJ - polycystin family receptor for egg jelly protein-coding chr17-2739 chr17 78179555 78179765 + 12.4 0.000 intron (NM_003258, intron 4 of 6) intron (NM_003258, intron 4 of 6) 7392 NM_001346663 7083 Hs.515122 NM_003258 ENSG00000167900 TK1 TK2 thymidine kinase 1 protein-coding chr3-792 chr3 127456655 127456865 + 12.4 0.000 Intergenic Intergenic -66090 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr1-5348 chr1 232675420 232675630 + 12.4 0.000 Intergenic Intergenic -42546 NR_146922 105373199 Hs.254475 NR_146922 ENSG00000225919 LINC01745 - long intergenic non-protein coding RNA 1745 ncRNA chr3-2147 chr3 125099031 125099241 + 12.4 0.000 intron (NM_001195483, intron 9 of 12) L1M4a1|LINE|L1 -43139 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr2-5638 chr2 191487901 191488111 + 12.4 0.000 Intergenic LTR33C|LTR|ERVL -190066 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr4-967 chr4 44725995 44726205 + 12.4 0.000 intron (NM_001270880, intron 1 of 5) CpG 456 NM_138335 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr11-1934 chr11 75668156 75668366 + 12.4 0.000 exon (NM_033063, exon 1 of 4) exon (NM_033063, exon 1 of 4) 173 NM_033063 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr22-584 chr22 38398260 38398470 + 12.4 0.000 intron (NR_002821, intron 1 of 4) CpG 550 NM_001289912 102800317 Hs.720223 NM_001289912 ENSG00000283900 TPTEP2-CSNK1E LOC400927-CSNK1E TPTEP2-CSNK1E readthrough protein-coding chr5-2152 chr5 96255544 96255754 + 12.4 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 176510 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr8-980 chr8 117901217 117901427 + 12.4 0.000 intron (NM_000127, intron 1 of 10) Tigger3b|DNA|TcMar-Tigger 19591 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr5-2402 chr5 106516941 106517151 + 12.4 0.000 Intergenic Charlie25|DNA|hAT-Charlie 493968 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr3-3405 chr3 77142694 77142904 + 12.4 0.000 intron (NM_001290039, intron 2 of 26) intron (NM_001290039, intron 2 of 26) 44787 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr17-1016 chr17 29722812 29723022 + 12.4 0.000 intron (NM_033389, intron 2 of 14) intron (NM_033389, intron 2 of 14) 38515 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr5-4872 chr5 66124413 66124623 + 12.4 0.000 Intergenic L1MEg|LINE|L1 -19782 NM_001077199 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding chr2-3508 chr2 222561937 222562147 + 12.4 0.000 3' UTR (NM_001320834, exon 5 of 5) 3' UTR (NM_001320834, exon 5 of 5) 94050 NM_005687 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chr19-2430 chr19 44710214 44710424 + 12.4 0.000 intron (NM_001039213, intron 6 of 6) intron (NM_001039213, intron 6 of 6) 11168 NM_001039213 388551 Hs.456381 NM_001039213 ENSG00000213892 CEACAM16 CEAL2|DFNA4B|DFNB113 carcinoembryonic antigen related cell adhesion molecule 16 protein-coding chr6-2011 chr6 35218608 35218818 + 12.4 0.000 intron (NM_001303136, intron 1 of 21) intron (NM_001303136, intron 1 of 21) 4757 NM_001303136 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding chr2-3415 chr2 54835542 54835752 + 12.4 0.000 intron (NM_001039753, intron 6 of 40) intron (NM_001039753, intron 6 of 40) 110635 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr2-2401 chr2 23651247 23651457 + 12.4 0.000 intron (NM_052920, intron 5 of 13) intron (NM_052920, intron 5 of 13) 266173 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr10-2765 chr10 123640233 123640443 + 12.4 0.000 Intergenic MIRb|SINE|MIR -26017 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr2-2476 chr2 120546190 120546400 + 12.4 0.000 Intergenic Intergenic -79946 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr14-1106 chr14 72646145 72646355 + 12.4 0.000 intron (NM_001280542, intron 8 of 10) L2b|LINE|L2 129430 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr5-1153 chr5 168880096 168880306 + 12.4 0.000 intron (NM_003062, intron 5 of 35) intron (NM_003062, intron 5 of 35) -111946 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr2-3861 chr2 36556971 36557181 + 12.4 0.000 intron (NM_005102, intron 6 of 7) intron (NM_005102, intron 6 of 7) 41092 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr9-2846 chr9 127586478 127586688 + 12.4 0.000 Intergenic Intergenic -7552 NM_001035534 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr4-3837 chr4 123232478 123232688 + 12.4 0.000 intron (NM_001345856, intron 14 of 15) L2b|LINE|L2 -164212 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr10-2720 chr10 109247153 109247363 + 12.4 0.000 Intergenic MIRb|SINE|MIR 675988 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr15-1129 chr15 42704479 42704689 + 12.4 0.000 intron (NM_020759, intron 26 of 32) L1M1|LINE|L1 32544 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr2-5719 chr2 215949979 215950189 + 12.4 0.000 intron (NM_018000, intron 2 of 4) intron (NM_018000, intron 2 of 4) 63467 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr12-3250 chr12 64171828 64172038 + 12.4 0.000 Intergenic Intergenic 50363 NM_152440 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr9-3429 chr9 136177314 136177524 + 12.4 0.000 Intergenic Intergenic 24255 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr12-6064 chr12 116019686 116019896 + 12.4 0.000 exon (NM_015335, exon 6 of 31) exon (NM_015335, exon 6 of 31) 128863 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr3-2490 chr3 150348550 150348760 + 12.4 0.000 Intergenic Intergenic -24908 NR_110186 101928022 Hs.555199 NR_110186 LINC01214 - long intergenic non-protein coding RNA 1214 ncRNA chr2-5712 chr2 214333997 214334207 + 12.4 0.000 intron (NR_047660, intron 14 of 14) HERV16-int|LTR|ERVL -76952 NM_001080500 402117 Hs.534834 NM_001080500 ENSG00000174453 VWC2L - von Willebrand factor C domain containing 2 like protein-coding chr1-2807 chr1 15849987 15850197 + 12.4 0.000 intron (NM_015001, intron 1 of 14) intron (NM_015001, intron 1 of 14) -1945 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr4-2248 chr4 158783856 158784066 + 12.4 0.000 intron (NM_001346043, intron 1 of 15) intron (NM_001346043, intron 1 of 15) 14935 NM_001346043 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr1-3613 chr1 35717845 35718055 + 12.4 0.000 intron (NM_152374, intron 1 of 1) intron (NM_152374, intron 1 of 1) 934 NM_152374 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr3-2254 chr3 50147902 50148112 + 12.4 0.000 intron (NR_135301, intron 1 of 3) intron (NR_135301, intron 1 of 3) -7051 NM_001318798 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chr16-1401 chr16 89189598 89189808 + 12.4 0.000 intron (NM_004933, intron 7 of 13) intron (NM_004933, intron 7 of 13) 10834 NM_001366322 146429 Hs.447544 NM_001242757 ENSG00000259803 SLC22A31 - solute carrier family 22 member 31 protein-coding chr17-1724 chr17 75338513 75338723 + 12.4 0.000 intron (NM_002086, intron 2 of 5) intron (NM_002086, intron 2 of 5) -49169 NM_001126122 60386 Hs.514470 NM_021734 ENSG00000125454 SLC25A19 DNC|MCPHA|MUP1|THMD3|THMD4|TPC solute carrier family 25 member 19 protein-coding chr11-3358 chr11 122633336 122633546 + 12.4 0.000 Intergenic Intergenic -22281 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr15-1023 chr15 88467214 88467424 + 12.4 0.000 promoter-TSS (NM_001321976) promoter-TSS (NM_001321976) 69 NM_022163 26589 Hs.534261 NM_022163 ENSG00000259494 MRPL46 C15orf4|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding chr16-1845 chr16 66841327 66841537 + 12.4 0.000 Intergenic Intergenic -2982 NM_005182 766 Hs.37014 NM_005182 ENSG00000168748 CA7 CA-VII|CAVII carbonic anhydrase 7 protein-coding chr3-5035 chr3 32952801 32953011 + 12.4 0.000 intron (NM_005508, intron 1 of 1) intron (NM_005508, intron 1 of 1) 1262 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr2-3969 chr2 71580963 71581173 + 12.4 0.000 intron (NM_001130985, intron 30 of 54) MER94|DNA|hAT-Blackjack 114369 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr12-2967 chr12 110135009 110135219 + 12.4 0.000 intron (NR_144950, intron 6 of 18) intron (NR_144950, intron 6 of 18) 10757 NR_144950 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr14-709 chr14 90758503 90758713 + 12.4 0.000 intron (NM_001320421, intron 3 of 20) CpG 57809 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding GL000225.1-33 GL000225.1 42085 42295 + 12.4 0.000 NA NA NA NA chr7-2180 chr7 79403612 79403822 + 12.4 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) -49240 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr14-974 chr14 69781220 69781430 + 12.4 0.000 intron (NM_003049, intron 2 of 4) MLT1M|LTR|ERVL-MaLR -13612 NR_029378 100289511 Hs.729250 NR_029378 LOC100289511 - uncharacterized LOC100289511 ncRNA chr2-1204 chr2 190880545 190880755 + 12.4 0.000 promoter-TSS (NM_001256310) promoter-TSS (NM_001256310) -171 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr5-6384 chr5 140007347 140007557 + 12.4 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 35847 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr1-2770 chr1 115976093 115976303 + 12.4 0.000 promoter-TSS (NM_018420) promoter-TSS (NM_018420) -315 NM_018420 55356 Hs.125482 NM_018420 ENSG00000163393 SLC22A15 FLIPT1|PRO34686 solute carrier family 22 member 15 protein-coding chrX-596 chrX 123626938 123627148 + 12.4 0.000 intron (NM_001081550, intron 23 of 38) L2|LINE|L2 106009 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr5-3789 chr5 76321323 76321533 + 12.4 0.000 intron (NM_001297716, intron 12 of 12) intron (NM_001297716, intron 12 of 12) -81857 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr1-2955 chr1 94690475 94690685 + 12.4 0.000 intron (NR_160779, intron 2 of 5) MLT1L|LTR|ERVL-MaLR 55320 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr11-3382 chr11 128518919 128519129 + 12.4 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 3286 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr17-3945 chr17 61574734 61574944 + 12.4 0.000 Intergenic Intergenic 16380 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr2-3014 chr2 54860312 54860522 + 12.3 0.000 intron (NM_001039753, intron 11 of 40) L1M3de|LINE|L1 135405 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr2-3202 chr2 218229195 218229405 + 12.3 0.000 intron (NM_152862, intron 4 of 10) intron (NM_152862, intron 4 of 10) 11903 NM_005731 10109 Hs.529303 NM_005731 ENSG00000163466 ARPC2 ARC34|PNAS-139|PRO2446|p34-Arc actin related protein 2/3 complex subunit 2 protein-coding chrX-1265 chrX 106543401 106543611 + 12.3 0.000 Intergenic L1MEg|LINE|L1 -68424 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr4-3154 chr4 181996503 181996713 + 12.3 0.000 Intergenic L2a|LINE|L2 147907 NR_125905 90768 Hs.175465 NR_027107 TENM3-AS1 - TENM3 antisense RNA 1 ncRNA chrX-2153 chrX 35689435 35689645 + 12.3 0.000 Intergenic Tigger10|DNA|TcMar-Tigger -108802 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr2-3965 chr2 69683212 69683422 + 12.3 0.000 intron (NM_001320698, intron 2 of 14) intron (NM_001320698, intron 2 of 14) 39509 NM_001320698 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr1-9890 chr1 68890653 68890863 + 12.3 0.000 Intergenic L1ME3G|LINE|L1 -165140 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr3-1077 chr3 129598032 129598242 + 12.3 0.000 intron (NM_015103, intron 1 of 35) L2b|LINE|L2 8602 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr3-4596 chr3 192036475 192036685 + 12.3 0.000 Intergenic L1ME3C|LINE|L1 -202050 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr3-6743 chr3 139598949 139599159 + 12.3 0.000 intron (NM_001320510, intron 3 of 6) intron (NM_001320510, intron 3 of 6) -59312 NM_001130993 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr4-3826 chr4 121626586 121626796 + 12.3 0.000 Intergenic Intergenic 70289 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr6-3113 chr6 98816510 98816720 + 12.3 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 15085 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr6-6960 chr6 17559872 17560082 + 12.3 0.000 Intergenic Intergenic -40325 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr16-3249 chr16 87546499 87546709 + 12.3 0.000 Intergenic Intergenic 52417 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr18-2925 chr18 13229320 13229530 + 12.3 0.000 intron (NM_181482, intron 1 of 5) MIRb|SINE|MIR -10118 NR_146617 147276 Hs.675872 NR_146617 ENSG00000279020 C18orf15 HsT3231 chromosome 18 open reading frame 15 (putative) ncRNA chr3-7166 chr3 186638333 186638543 + 12.3 0.000 Intergenic Intergenic -1961 NM_001308079 26998 Hs.81073 NM_014375 ENSG00000090512 FETUB 16G2|Gugu|IRL685 fetuin B protein-coding chr2-1805 chr2 45025001 45025211 + 12.3 0.000 Intergenic Intergenic -15654 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr1-8248 chr1 32077082 32077292 + 12.3 0.000 exon (NM_001319677, exon 5 of 9) exon (NM_001319677, exon 5 of 9) 4248 NM_018056 55116 Hs.25544 NM_018056 ENSG00000121775 TMEM39B - transmembrane protein 39B protein-coding chr5-2139 chr5 82858749 82858959 + 12.3 0.000 intron (NR_105016, intron 1 of 3) intron (NR_105016, intron 1 of 3) 982 NR_105016 102546175 NR_105016 ENSG00000281327 LINC01338 - long intergenic non-protein coding RNA 1338 ncRNA chrX-2359 chrX 66144251 66144461 + 12.3 0.000 Intergenic MER61A|LTR|ERV1 -18315 NM_138737 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr6-5465 chr6 159729757 159729967 + 12.3 0.000 intron (NM_152857, intron 1 of 5) intron (NM_152857, intron 1 of 5) 2356 NM_001270533 9589 Hs.446091 NM_004906 ENSG00000146457 WTAP Mum2 WT1 associated protein protein-coding chr10-3391 chr10 28906958 28907168 + 12.3 0.000 Intergenic AluSx3|SINE|Alu 60655 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr9-2776 chr9 110615650 110615860 + 12.3 0.000 Intergenic Intergenic -36014 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr13-2241 chr13 25199630 25199840 + 12.3 0.000 Intergenic LTR78|LTR|ERV1 18403 NR_120427 102723318 Hs.549877 NR_120427 LINC01053 - long intergenic non-protein coding RNA 1053 ncRNA chr3-1842 chr3 75623792 75624002 + 12.3 0.000 Intergenic Intergenic -6866 NR_031714 100302212 NR_031714 ENSG00000283894 MIR1324 MIRN1324|hsa-mir-1324 microRNA 1324 ncRNA chr10-1570 chr10 804994 805204 + 12.3 0.000 Intergenic Intergenic -115431 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr6-4899 chr6 93771600 93771810 + 12.3 0.000 intron (NR_015362, intron 8 of 9) intron (NR_015362, intron 8 of 9) 53402 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr3-3141 chr3 160349739 160349949 + 12.3 0.000 intron (NM_001190242, intron 7 of 18) intron (NM_001190242, intron 7 of 18) 33922 NM_001190242 57560 Hs.478095 NM_020800 ENSG00000068885 IFT80 ATD2|SRTD2|WDR56 intraflagellar transport 80 protein-coding chrX-2340 chrX 63519470 63519680 + 12.3 0.000 intron (NR_152610, intron 1 of 4) L1PA4|LINE|L1 41520 NR_015353 92249 Hs.31532 NR_015353 ENSG00000235437 LINC01278 - long intergenic non-protein coding RNA 1278 ncRNA chr18-1074 chr18 36993154 36993364 + 12.3 0.000 intron (NR_136303, intron 6 of 13) intron (NR_136303, intron 6 of 13) -69445 NR_134585 105372069 Hs.666765 NR_134585 ENSG00000267039 LOC105372069 - uncharacterized LOC105372069 ncRNA chr7-3011 chr7 54878561 54878771 + 12.3 0.000 Intergenic L1M4b|LINE|L1 119353 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr14-2615 chr14 59685875 59686085 + 12.3 0.000 intron (NM_021136, intron 3 of 8) L1M2|LINE|L1 -38960 NR_049851 100847088 NR_049851 ENSG00000263629 MIR5586 - microRNA 5586 ncRNA chr1-7207 chr1 217883549 217883759 + 12.3 0.000 Intergenic MER77|LTR|ERVL -9246 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chr10-4892 chr10 19423009 19423219 + 12.3 0.000 intron (NM_001142308, intron 28 of 39) intron (NM_001142308, intron 28 of 39) 305436 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr15-2428 chr15 72838791 72839001 + 12.3 0.000 Intergenic L2|LINE|L2 -55138 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr12-2591 chr12 118060581 118060791 + 12.3 0.000 intron (NM_001278557, intron 1 of 8) intron (NM_001278557, intron 1 of 8) 525 NM_001278558 55884 Hs.506985 NM_018639 ENSG00000176871 WSB2 SBA2 WD repeat and SOCS box containing 2 protein-coding chr11-2747 chr11 46361167 46361377 + 12.3 0.000 promoter-TSS (NM_001105540) promoter-TSS (NM_001105540) -334 NM_001105540 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr11-2292 chr11 36073524 36073734 + 12.3 0.000 intron (NR_135064, intron 1 of 1) intron (NR_135064, intron 1 of 1) 4272 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr20-2693 chr20 46902936 46903146 + 12.3 0.000 intron (NM_172110, intron 1 of 13) intron (NM_172110, intron 1 of 13) 8198 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr2-9454 chr2 234569905 234570115 + 12.3 0.000 Intergenic Intergenic -72929 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr1-2926 chr1 32861620 32861830 + 12.3 0.000 TTS (NM_001171941) TTS (NM_001171941) 9088 NM_001171940 252995 Hs.524234 NM_153756 ENSG00000160097 FNDC5 FRCP2|irisin fibronectin type III domain containing 5 protein-coding chr3-1621 chr3 43759447 43759657 + 12.3 0.000 Intergenic Intergenic -67958 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr18-2634 chr18 39998385 39998595 + 12.3 0.000 Intergenic Intergenic -67796 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr20-1049 chr20 407231 407441 + 12.3 0.000 promoter-TSS (NM_031229) promoter-TSS (NM_031229) -714 NM_001323956 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr3-2980 chr3 80285702 80285912 + 12.3 0.000 Intergenic L1ME1|LINE|L1 -479090 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr17-3159 chr17 63251130 63251340 + 12.3 0.000 intron (NM_025185, intron 7 of 25) intron (NM_025185, intron 7 of 25) 189032 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr12-1287 chr12 108628449 108628659 + 12.3 0.000 intron (NM_003006, intron 1 of 1) intron (NM_003006, intron 1 of 1) 3527 NM_001206609 6404 Hs.591014 NM_003006 ENSG00000110876 SELPLG CD162|CLA|PSGL-1|PSGL1 selectin P ligand protein-coding chr1-6497 chr1 22963364 22963574 + 12.3 0.000 intron (NM_001289974, intron 3 of 7) intron (NM_001289974, intron 3 of 7) 9397 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr18-1786 chr18 11553435 11553645 + 12.3 0.000 Intergenic Intergenic -56018 NM_001282300 646000 NM_001282300 ENSG00000236396 SLC35G4 AMAC1L1|SLC35G4P solute carrier family 35 member G4 protein-coding chrX-1612 chrX 108423818 108424028 + 12.3 0.000 intron (NM_001287758, intron 2 of 45) intron (NM_001287758, intron 2 of 45) 14499 NM_033641 1288 Hs.145586 NM_001847 ENSG00000197565 COL4A6 CXDELq22.3|DELXq22.3|DFNX6 collagen type IV alpha 6 chain protein-coding chrX-1370 chrX 150934538 150934748 + 12.3 0.000 Intergenic Intergenic -35827 NM_001242614 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr22-908 chr22 28442320 28442530 + 12.3 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -17444 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr5-1662 chr5 33772631 33772841 + 12.3 0.000 intron (NM_001324511, intron 2 of 2) intron (NM_001324511, intron 2 of 2) 119254 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chrX-1121 chrX 23099882 23100092 + 12.3 0.000 intron (NR_073010, intron 2 of 11) L1PA16|LINE|L1 100027 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr4-3060 chr4 142416287 142416497 + 12.3 0.000 intron (NM_001331040, intron 5 of 25) intron (NM_001331040, intron 5 of 25) 430143 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr5-5077 chr5 95759632 95759842 + 12.3 0.000 intron (NM_014899, intron 6 of 11) intron (NM_014899, intron 6 of 11) -27635 NM_001349303 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr17-2588 chr17 76053531 76053741 + 12.3 0.000 promoter-TSS (NM_001260503) promoter-TSS (NM_001260503) 20 NM_001260503 6730 Hs.514495 NM_014230 ENSG00000167881 SRP68 - signal recognition particle 68 protein-coding chr8-1589 chr8 134972395 134972605 + 12.3 0.000 Intergenic MER44B|DNA|TcMar-Tigger 122565 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr4-742 chr4 106316282 106316492 + 12.3 0.000 promoter-TSS (NM_001163435) promoter-TSS (NM_001163435) -163 NM_001142416 9255 Hs.591680 NM_004757 ENSG00000164022 AIMP1 EMAP2|EMAPII|HLD3|SCYE1|p43 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 protein-coding chr4-3736 chr4 78174595 78174805 + 12.3 0.000 intron (NM_001166133, intron 2 of 41) intron (NM_001166133, intron 2 of 41) -114285 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr22-1099 chr22 36055727 36055937 + 12.3 0.000 Intergenic HAL1|LINE|L1 -27008 NM_001082578 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr4-5475 chr4 67102957 67103167 + 12.3 0.000 Intergenic Intergenic 318938 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr3-2671 chr3 45668039 45668249 + 12.3 0.000 intron (NM_014240, intron 3 of 7) intron (NM_014240, intron 3 of 7) 20738 NR_033947 644714 Hs.712889 NR_033947 LIMD1-AS1 - LIMD1 antisense RNA 1 ncRNA chr6-4374 chr6 21668750 21668960 + 12.3 0.000 non-coding (NR_015410, exon 2 of 12) non-coding (NR_015410, exon 2 of 12) 2442 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr10-4234 chr10 125610200 125610410 + 12.3 0.000 intron (NM_001318133, intron 3 of 3) MER41B|LTR|ERV1 35934 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr18-1230 chr18 45731219 45731429 + 12.3 0.000 intron (NM_001308278, intron 3 of 8) intron (NM_001308278, intron 3 of 8) 4371 NM_001146037 6563 Hs.101307 NM_015865 ENSG00000141469 SLC14A1 HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE solute carrier family 14 member 1 (Kidd blood group) protein-coding chr16-2834 chr16 80037851 80038061 + 12.3 0.000 Intergenic MIRb|SINE|MIR 242707 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr6-4961 chr6 104357716 104357926 + 12.3 0.000 Intergenic Eulor6B|DNA?|DNA? 501725 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr11-3465 chr11 72975938 72976148 + 12.3 0.000 intron (NM_014824, intron 8 of 19) intron (NM_014824, intron 8 of 19) 161632 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr6-2150 chr6 14436641 14436851 + 12.3 0.000 Intergenic ERVL-B4-int|LTR|ERVL -151292 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr4-4214 chr4 15657259 15657469 + 12.3 0.000 Intergenic Intergenic -1952 NM_001193535 26234 Hs.643433 NM_012161 ENSG00000118564 FBXL5 FBL4|FBL5|FLR1 F-box and leucine rich repeat protein 5 protein-coding chr9-2797 chr9 118170113 118170323 + 12.3 0.000 Intergenic Intergenic 465815 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr3-6760 chr3 141264734 141264944 + 12.3 0.000 intron (NM_001282728, intron 3 of 6) MIR|SINE|MIR 33014 NM_001037172 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr1-3751 chr1 1495298 1495508 + 12.3 0.000 intron (NM_031921, intron 15 of 15) intron (NM_031921, intron 15 of 15) -16759 NM_001170535 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr1-9882 chr1 67556970 67557180 + 12.3 0.000 Intergenic AluSx|SINE|Alu -126673 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr10-1927 chr10 942724 942934 + 12.3 0.000 TTS (NR_120629) TTS (NR_120629) 9803 NR_120629 101927762 Hs.151159 NR_120629 ENSG00000229869 LOC101927762 - uncharacterized LOC101927762 ncRNA chr6-5304 chr6 142693081 142693291 + 12.3 0.000 Intergenic Intergenic -55297 NR_027312 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr5-4196 chr5 112520084 112520294 + 12.3 0.000 Intergenic L1PBa1|LINE|L1 100606 NR_027706 54508 Hs.591264 NR_027706 ENSG00000278921 EPB41L4A-DT EPB41L4A-AS2 EPB41L4A divergent transcript ncRNA chr16-1829 chr16 56847022 56847232 + 12.3 0.000 3' UTR (NM_001242795, exon 20 of 20) 3' UTR (NM_001242795, exon 20 of 20) -11391 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr14-2794 chr14 21192645 21192855 + 12.3 0.000 Intergenic MER52A|LTR|ERV1 12753 NR_038970 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA chr15-1458 chr15 90315715 90315925 + 12.3 0.000 Intergenic Intergenic 33627 NR_028287 23766 Hs.592014 NR_028287 GABARAPL3 ATG8D GABA type A receptor associated protein like 3 pseudogene pseudo chr2-5099 chr2 14826759 14826969 + 12.3 0.000 Intergenic Intergenic 194147 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr11-2517 chr11 72091374 72091584 + 12.3 0.000 intron (NR_026886, intron 4 of 6) intron (NR_026886, intron 4 of 6) -10786 NM_006185 4926 Hs.325978 NM_006185 ENSG00000137497 NUMA1 NMP-22|NUMA nuclear mitotic apparatus protein 1 protein-coding chr9-1619 chr9 129332220 129332430 + 12.3 0.000 Intergenic Intergenic -4598 NR_120686 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr4-1487 chr4 30912329 30912539 + 12.3 0.000 intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 192065 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr16-1227 chr16 88844066 88844276 + 12.3 0.000 intron (NM_001323544, intron 1 of 14) intron (NM_001323544, intron 1 of 14) -12049 NR_134671 51693 Hs.461722 NM_016209 ENSG00000167515 TRAPPC2L HSPC176|PERRB trafficking protein particle complex 2 like protein-coding chr15-1618 chr15 85333390 85333600 + 12.3 0.000 Intergenic Intergenic -47101 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr20-2841 chr20 61404989 61405199 + 12.3 0.000 intron (NM_001794, intron 2 of 15) intron (NM_001794, intron 2 of 15) -94327 NM_001252338 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr10-2675 chr10 99162208 99162418 + 12.3 0.000 intron (NM_021828, intron 2 of 11) intron (NM_021828, intron 2 of 11) 73562 NM_001166246 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding chr20-788 chr20 58618882 58619092 + 12.3 0.000 non-coding (NR_034147, exon 7 of 7) non-coding (NR_034147, exon 7 of 7) -15785 NR_125359 79160 Hs.280135 NR_125359 ENSG00000268941 LINC01711 - long intergenic non-protein coding RNA 1711 ncRNA chr4-3935 chr4 164768475 164768685 + 12.3 0.000 intron (NM_001352885, intron 1 of 2) intron (NM_001352885, intron 1 of 2) 14449 NM_001352885 100505989 Hs.328236 NM_001352885 ENSG00000248771 SMIM31 LINC01207 small integral membrane protein 31 protein-coding chr7-788 chr7 5614710 5614920 + 12.3 0.000 Intergenic Intergenic 21999 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr12-2525 chr12 96237623 96237833 + 12.3 0.000 intron (NM_005230, intron 2 of 4) FAM|SINE|Alu -17770 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr10-1583 chr10 18254819 18255029 + 12.3 0.000 intron (NM_201593, intron 2 of 13) intron (NM_201593, intron 2 of 13) -5798 NM_000724 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr4-1298 chr4 107258416 107258626 + 12.3 0.000 Intergenic Intergenic -222208 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr5-2667 chr5 28580805 28581015 + 12.3 0.000 Intergenic L1PA16|LINE|L1 -293245 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr1-6021 chr1 61268111 61268321 + 12.3 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) -14698 NR_104180 645030 Hs.632410 NR_104180 ENSG00000237853 NFIA-AS1 - NFIA antisense RNA 1 ncRNA chrX-489 chrX 2819556 2819766 + 12.3 0.000 Intergenic Charlie17|DNA|hAT-Charlie -9161 NM_001184703 8908 Hs.567381 NM_003918 ENSG00000056998 GYG2 GN-2|GN2 glycogenin 2 protein-coding chr12-7736 chr12 92786157 92786367 + 12.3 0.000 intron (NM_003566, intron 22 of 28) L2|LINE|L2 49773 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 - pleckstrin homology and RhoGEF domain containing G7 protein-coding chr13-519 chr13 49071506 49071716 + 12.3 0.000 intron (NM_001079673, intron 2 of 25) L1MA4|LINE|L1 -38706 NM_014923 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr8-4668 chr8 137489813 137490023 + 12.3 0.000 Intergenic Intergenic -76330 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr8-871 chr8 117836119 117836329 + 12.3 0.000 intron (NM_000127, intron 2 of 10) intron (NM_000127, intron 2 of 10) 84689 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr7-6335 chr7 145984757 145984967 + 12.3 0.000 Intergenic Intergenic -789409 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr1-8617 chr1 196438209 196438419 + 12.3 0.000 intron (NM_001287820, intron 8 of 26) intron (NM_001287820, intron 8 of 26) 144167 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chr1-3360 chr1 91769410 91769620 + 12.3 0.000 intron (NR_036634, intron 4 of 17) intron (NR_036634, intron 4 of 17) 116636 NR_036634 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr13-621 chr13 41562156 41562366 + 12.3 0.000 Intergenic Intergenic 6134 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr14-657 chr14 49894110 49894320 + 12.3 0.000 exon (NM_001663, exon 2 of 2) exon (NM_001663, exon 2 of 2) 1133 NM_001663 382 Hs.525330 NM_001663 ENSG00000165527 ARF6 - ADP ribosylation factor 6 protein-coding chr11-2632 chr11 23897506 23897716 + 12.3 0.000 Intergenic Intergenic -478421 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr9-1685 chr9 88537680 88537890 + 12.3 0.000 intron (NM_145283, intron 1 of 2) intron (NM_145283, intron 1 of 2) 2607 NM_145283 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chrX-711 chrX 105375772 105375982 + 12.3 0.000 intron (NM_017416, intron 5 of 10) intron (NM_017416, intron 5 of 10) -155184 NM_031274 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr9-3374 chr9 125106430 125106640 + 12.3 0.000 intron (NM_173690, intron 2 of 18) intron (NM_173690, intron 2 of 18) 36993 NM_001144877 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr5-3074 chr5 35660450 35660660 + 12.3 0.000 intron (NM_144722, intron 8 of 9) intron (NM_144722, intron 8 of 9) 42692 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr5-5700 chr5 165191236 165191446 + 12.3 0.000 Intergenic Intergenic 721062 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr4-3713 chr4 66220436 66220646 + 12.3 0.000 Intergenic L1PA8|LINE|L1 -56283 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA KI270736.1-17 KI270736.1 167654 167864 + 12.3 0.000 NA NA NA NA chr3-6426 chr3 101631960 101632170 + 12.3 0.000 Intergenic LTR6A|LTR|ERV1 -44365 NR_024407 100009676 Hs.743292 NR_024407 ENSG00000256628 ZBTB11-AS1 - ZBTB11 antisense RNA 1 ncRNA chr17-5638 chr17 49823695 49823905 + 12.3 0.000 intron (NM_007067, intron 12 of 14) Tigger17a|DNA|TcMar-Tigger -22110 NM_001242791 729220 Hs.434138 NM_001242791 FLJ45513 - uncharacterized LOC729220 protein-coding chr2-9286 chr2 221834016 221834226 + 12.3 0.000 Intergenic Intergenic -259919 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr2-11450 chr2 227117240 227117450 + 12.3 0.000 intron (NM_000092, intron 7 of 47) intron (NM_000092, intron 7 of 47) 47214 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr3-2834 chr3 18189669 18189879 + 12.3 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 227222 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr10-1392 chr10 69408589 69408799 + 12.3 0.000 intron (NM_001057, intron 3 of 4) CpG 8224 NM_001057 6865 Hs.88372 NM_001057 ENSG00000075073 TACR2 NK2R|NKNAR|SKR|TAC2R tachykinin receptor 2 protein-coding chr15-1649 chr15 98842754 98842964 + 12.3 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 58433 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr17-2934 chr17 50681386 50681596 + 12.3 0.000 intron (NM_003786, intron 26 of 30) L2a|LINE|L2 26423 NM_052855 91369 Hs.463426 NM_052855 ENSG00000154945 ANKRD40 - ankyrin repeat domain 40 protein-coding chr7-4638 chr7 29807704 29807914 + 12.3 0.000 intron (NM_001080529, intron 1 of 8) intron (NM_001080529, intron 1 of 8) 1255 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family member 3 protein-coding chr2-13877 chr2 179422212 179422422 + 12.3 0.000 Intergenic Intergenic 140271 NR_148055 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr7-1528 chr7 79982333 79982543 + 12.3 0.000 Intergenic Intergenic -152393 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr8-1241 chr8 123671162 123671372 + 12.3 0.000 Intergenic Intergenic -17466 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr3-937 chr3 114685241 114685451 + 12.3 0.000 intron (NM_001348803, intron 6 of 13) intron (NM_001348803, intron 6 of 13) 58179 NR_039959 100616166 NR_039959 ENSG00000264623 MIR4796 mir-4796 microRNA 4796 ncRNA chr13-914 chr13 51397424 51397634 + 12.3 0.000 intron (NM_012141, intron 4 of 17) intron (NM_012141, intron 4 of 17) -48890 NR_049878 100847003 NR_049878 ENSG00000266072 MIR5693 - microRNA 5693 ncRNA chr17-6061 chr17 79577629 79577839 + 12.3 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 33317 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr3-2132 chr3 98815129 98815339 + 12.3 0.000 intron (NM_080927, intron 9 of 15) L1MEc|LINE|L1 51927 NM_001323368 10402 Hs.148716 NM_006100 ENSG00000064225 ST3GAL6 SIAT10|ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding chr2-4918 chr2 154455885 154456095 + 12.3 0.000 intron (NR_161181, intron 2 of 4) intron (NR_161181, intron 2 of 4) 1448 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chrX-967 chrX 118346601 118346811 + 12.3 0.000 intron (NM_001184966, intron 1 of 17) intron (NM_001184966, intron 1 of 17) 600 NM_001184965 54521 Hs.98510 NM_019045 ENSG00000131725 WDR44 RAB11BP|RPH11|SYM-4 WD repeat domain 44 protein-coding chr4-5361 chr4 186097221 186097431 + 12.3 0.000 Intergenic Intergenic -7378 NM_001367768 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr19-2397 chr19 11767600 11767810 + 12.3 0.000 intron (NM_152355, intron 1 of 3) LTR26E|LTR|ERV1 705 NM_152355 126068 Hs.675132 NM_152355 ENSG00000197044 ZNF441 - zinc finger protein 441 protein-coding chr17-859 chr17 60078508 60078718 + 12.3 0.000 promoter-TSS (NR_135648) promoter-TSS (NR_135648) 318 NM_022070 63897 Hs.221899 NM_022070 ENSG00000068097 HEATR6 ABC1 HEAT repeat containing 6 protein-coding chr21-167 chr21 43866340 43866550 + 12.3 0.000 intron (NM_001369878, intron 1 of 8) intron (NM_001369878, intron 1 of 8) 1222 NM_001369878 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr6-1428 chr6 150925325 150925535 + 12.3 0.000 intron (NM_001350486, intron 10 of 27) intron (NM_001350486, intron 10 of 27) 58944 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr4-2021 chr4 2753650 2753860 + 12.3 0.000 intron (NM_001292016, intron 1 of 4) intron (NM_001292016, intron 1 of 4) 2581 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr13-1565 chr13 33279827 33280037 + 12.3 0.000 intron (NR_046693, intron 2 of 2) intron (NR_046693, intron 2 of 2) 2378 NR_046693 100874241 Hs.662433 NR_046693 ENSG00000236581 STARD13-AS STARD13-AS2 STARD13 antisense RNA ncRNA chr4-6856 chr4 9913658 9913868 + 12.3 0.000 intron (NM_001001290, intron 8 of 12) intron (NM_001001290, intron 8 of 12) 107734 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr21-265 chr21 45253834 45254044 + 12.3 0.000 intron (NR_135279, intron 2 of 2) intron (NR_135279, intron 2 of 2) 19599 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr2-4173 chr2 186166502 186166712 + 12.3 0.000 Intergenic Intergenic -80290 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr17-4208 chr17 32755077 32755287 + 12.3 0.000 intron (NM_015194, intron 11 of 21) intron (NM_015194, intron 11 of 21) 121942 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr17-2849 chr17 28118762 28118972 + 12.3 0.000 intron (NM_016231, intron 1 of 10) intron (NM_016231, intron 1 of 10) 76190 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr15-3511 chr15 99405385 99405595 + 12.3 0.000 Intergenic MER31A|LTR|ERV1 147965 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr1-5013 chr1 70142268 70142478 + 12.3 0.000 3' UTR (NM_001366841, exon 27 of 27) 3' UTR (NM_001366841, exon 27 of 27) 63206 NM_017768 55631 Hs.147836 NM_017768 ENSG00000066557 LRRC40 dJ677H15.1 leucine rich repeat containing 40 protein-coding chr1-5534 chr1 212104868 212105078 + 12.3 0.000 TTS (NM_016448) TTS (NM_016448) 27360 NR_036068 100422947 NR_036068 ENSG00000264358 MIR3122 mir-3122 microRNA 3122 ncRNA chrX-1024 chrX 67781192 67781402 + 12.3 0.000 Intergenic Intergenic 236674 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr3-3977 chr3 53299550 53299760 + 12.3 0.000 intron (NM_001290207, intron 4 of 7) intron (NM_001290207, intron 4 of 7) 33472 NR_145715 109617024 NR_145715 ENSG00000207109 SNORD38C - small nucleolar RNA, C/D box 38C snoRNA chr13-586 chr13 98577646 98577856 + 12.3 0.000 promoter-TSS (NM_001286649) promoter-TSS (NM_001286649) 496 NR_046542 100874069 Hs.594160 NR_046542 STK24-AS1 - STK24 antisense RNA 1 ncRNA chr2-2648 chr2 175031090 175031300 + 12.3 0.000 Intergenic Intergenic -25816 NR_038133 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr10-2664 chr10 95415294 95415504 + 12.3 0.000 intron (NM_001034955, intron 6 of 30) intron (NM_001034955, intron 6 of 30) 25781 NM_001290297 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr9-1398 chr9 100598779 100598989 + 12.3 0.000 Intergenic CpG 20805 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr7-2096 chr7 4739593 4739803 + 12.3 0.000 intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) -35925 NM_014855 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 subunit zeta 1 protein-coding chr4-968 chr4 48017235 48017445 + 12.3 0.000 intron (NM_207330, intron 1 of 5) CpG 568 NM_207330 152519 Hs.134190 NM_207330 ENSG00000163293 NIPAL1 NPAL1 NIPA like domain containing 1 protein-coding chr6-1160 chr6 26183863 26184073 + 12.3 0.000 exon (NM_003523, exon 1 of 1) exon (NM_003523, exon 1 of 1) 172 NM_003523 8344 Hs.534369 NM_003523 ENSG00000274290 HIST1H2BE H2B.h|H2B/h|H2BFH|dJ221C16.8 histone cluster 1 H2B family member e protein-coding chr16-3195 chr16 84677584 84677794 + 12.3 0.000 Intergenic Intergenic -22311 NR_073578 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr13-798 chr13 101627159 101627369 + 12.3 0.000 intron (NM_001271754, intron 6 of 10) intron (NM_001271754, intron 6 of 10) 137312 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr12-1891 chr12 64609194 64609404 + 12.3 0.000 Intergenic MIRc|SINE|MIR -1196 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr2-14456 chr2 223528230 223528440 + 12.3 0.000 Intergenic Intergenic 74026 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr5-2124 chr5 75265779 75265989 + 12.3 0.000 Intergenic Intergenic -29006 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr13-1528 chr13 25860840 25861050 + 12.3 0.000 intron (NM_016529, intron 32 of 36) intron (NM_016529, intron 32 of 36) 190115 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr19-1808 chr19 1822470 1822680 + 12.3 0.000 non-coding (NR_152847, exon 1 of 4) non-coding (NR_152847, exon 1 of 4) 486 NR_152847 100288123 Hs.662426 NR_034114 ENSG00000267244 LOC100288123 - uncharacterized LOC100288123 ncRNA chr10-8542 chr10 93345926 93346136 + 12.3 0.000 intron (NM_013451, intron 37 of 53) intron (NM_013451, intron 37 of 53) 136303 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr1-8070 chr1 2089355 2089565 + 12.3 0.000 intron (NM_001242874, intron 1 of 14) MLT1A0|LTR|ERVL-MaLR -15256 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr4-8645 chr4 176058004 176058214 + 12.3 0.000 Intergenic Intergenic -7732 NM_001350727 116966 Hs.532056 NM_170710 ENSG00000150627 WDR17 - WD repeat domain 17 protein-coding chr8-4315 chr8 98598224 98598434 + 12.3 0.000 intron (NM_001256313, intron 4 of 8) intron (NM_001256313, intron 4 of 8) 171371 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr22-641 chr22 24516324 24516534 + 12.3 0.000 intron (NM_016327, intron 6 of 9) intron (NM_016327, intron 6 of 9) 21097 NM_016327 51733 Hs.731656 NM_016327 ENSG00000100024 UPB1 BUP1 beta-ureidopropionase 1 protein-coding chr3-2579 chr3 122493441 122493651 + 12.3 0.000 intron (NR_026698, intron 2 of 14) intron (NR_026698, intron 2 of 14) 21393 NR_026698 3836 Hs.161008 NM_002264 ENSG00000114030 KPNA1 IPOA5|NPI-1|RCH2|SRP1 karyopherin subunit alpha 1 protein-coding chr6-1903 chr6 7086432 7086642 + 12.3 0.000 Intergenic Intergenic -21206 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr8-1199 chr8 65840653 65840863 + 12.3 0.000 intron (NM_001242318, intron 1 of 12) intron (NM_001242318, intron 1 of 12) 1306 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chr8-960 chr8 93857648 93857858 + 12.3 0.000 Intergenic Intergenic 58366 NR_039602 100616169 NR_039602 ENSG00000284288 MIR378D2 mir-378d-2 microRNA 378d-2 ncRNA chr12-2822 chr12 120046522 120046732 + 12.3 0.000 intron (NR_147894, intron 3 of 8) L2c|LINE|L2 56783 NR_147893 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chr11-2861 chr11 10908314 10908524 + 12.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 50202 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr16-1894 chr16 87326738 87326948 + 12.3 0.000 TTS (NM_001282683) TTS (NM_001282683) 9334 NR_135180 101928659 Hs.667450 NR_135180 ENSG00000270006 LOC101928659 - uncharacterized LOC101928659 ncRNA chr13-2633 chr13 78195385 78195595 + 12.3 0.000 intron (NR_047001, intron 2 of 5) intron (NR_047001, intron 2 of 5) 140635 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr18-536 chr18 108009 108219 + 12.3 0.000 promoter-TSS (NR_033770) promoter-TSS (NR_033770) -951 NR_033770 727758 Hs.585843 NR_033770 ENSG00000263006 ROCK1P1 ROCK1P Rho associated coiled-coil containing protein kinase 1 pseudogene 1 pseudo chrX-1046 chrX 109268375 109268585 + 12.3 0.000 Intergenic Intergenic 213606 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chrX-1420 chrX 34489903 34490113 + 12.3 0.000 Intergenic MIRb|SINE|MIR 167277 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr1-7214 chr1 220700761 220700971 + 12.3 0.000 Intergenic Intergenic 10503 NM_024709 79762 Hs.519839 NM_024709 ENSG00000162817 C1orf115 - chromosome 1 open reading frame 115 protein-coding chr4-2201 chr4 125662847 125663057 + 12.3 0.000 Intergenic LTR48B|LTR|ERV1 155693 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr17-6432 chr17 7072963 7073173 + 12.3 0.000 Intergenic Intergenic 7183 NM_182906 10462 Hs.54403 NM_006344 ENSG00000132514 CLEC10A CD301|CLECSF13|CLECSF14|HML|HML2|MGL C-type lectin domain containing 10A protein-coding chr10-2708 chr10 103577715 103577925 + 12.3 0.000 intron (NM_004210, intron 3 of 5) intron (NM_004210, intron 3 of 5) -60378 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr4-4205 chr4 14488539 14488749 + 12.3 0.000 intron (NR_126435, intron 5 of 6) L1PB1|LINE|L1 376676 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr6-4625 chr6 46719355 46719565 + 12.3 0.000 intron (NM_005084, intron 2 of 11) MER5A1|DNA|hAT-Charlie 15915 NM_005084 7941 Hs.584823 NM_005084 ENSG00000146070 PLA2G7 LDL-PLA2|LP-PLA2|PAFAD|PAFAH phospholipase A2 group VII protein-coding chr10-5481 chr10 80071696 80071906 + 12.3 0.000 intron (NR_027432, intron 1 of 3) MER4B-int|LTR|ERV1 -6845 NM_001270372 80195 Hs.169982 NM_025125 ENSG00000133678 TMEM254 C10orf57|bA369J21.6 transmembrane protein 254 protein-coding chr6-4682 chr6 53927155 53927365 + 12.3 0.000 Intergenic Intergenic -2722 NR_125842 101927189 Hs.453592 NR_125842 ENSG00000236740 LOC101927189 - uncharacterized LOC101927189 ncRNA chr11-7926 chr11 1794587 1794797 + 12.3 0.000 Intergenic L1MEc|LINE|L1 -30765 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr1-2573 chr1 32142770 32142980 + 12.3 0.000 intron (NM_012316, intron 1 of 13) intron (NM_012316, intron 1 of 13) 34819 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr6-4196 chr6 3131551 3131761 + 12.3 0.000 intron (NM_004332, intron 4 of 6) intron (NM_004332, intron 4 of 6) 12945 NM_004332 670 Hs.10136 NM_004332 ENSG00000137274 BPHL BPH-RP|MCNAA|VACVASE biphenyl hydrolase like protein-coding chr6-2336 chr6 121438359 121438569 + 12.3 0.000 intron (NM_000165, intron 1 of 1) intron (NM_000165, intron 1 of 1) 2818 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr12-4904 chr12 66710923 66711133 + 12.3 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) -31952 NM_021150 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr11-5539 chr11 94749541 94749751 + 12.3 0.000 Intergenic LTR33|LTR|ERVL -9291 NR_135093 105369438 Hs.568921 NR_135093 ENSG00000255929 LOC105369438 - uncharacterized LOC105369438 ncRNA chr3-1432 chr3 11568684 11568894 + 12.3 0.000 promoter-TSS (NM_001128221) promoter-TSS (NM_001128221) 9 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr22-1369 chr22 30934566 30934776 + 12.3 0.000 intron (NM_001303257, intron 19 of 25) intron (NM_001303257, intron 19 of 25) 12363 NR_026920 150291 Hs.592202 NM_153044 ENSG00000235989 MORC2-AS1 C22orf27|NCRNA00325 MORC2 antisense RNA 1 ncRNA chr1-10406 chr1 157141019 157141229 + 12.3 0.000 Intergenic Intergenic -2533 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr3-3100 chr3 139588498 139588708 + 12.3 0.000 intron (NM_001320510, intron 3 of 6) HAL1|LINE|L1 -48861 NM_001130993 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr2-13402 chr2 140578404 140578614 + 12.3 0.000 intron (NM_018557, intron 43 of 90) L2a|LINE|L2 8176 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr3-3168 chr3 178195866 178196076 + 12.3 0.000 Intergenic Intergenic -223230 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr8-3376 chr8 54593169 54593379 + 12.3 0.000 Intergenic Intergenic -22822 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr18-670 chr18 55322467 55322677 + 12.3 0.000 promoter-TSS (NM_001243235) promoter-TSS (NM_001243235) -731 NM_001243234 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr10-6023 chr10 125785501 125785711 + 12.3 0.000 intron (NR_136677, intron 10 of 10) intron (NR_136677, intron 10 of 10) -9785 NM_147191 118856 Hs.314141 NM_147191 ENSG00000154485 MMP21 HTX7|MMP-21 matrix metallopeptidase 21 protein-coding chr9-2840 chr9 127336188 127336398 + 12.3 0.000 intron (NR_104591, intron 11 of 26) intron (NR_104591, intron 11 of 26) -60845 NM_001271711 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr22-1363 chr22 29331708 29331918 + 12.3 0.000 exon (NM_145730, exon 17 of 21) exon (NM_145730, exon 17 of 21) 1445 NR_003686 100113380 NR_003686 ENSG00000239127 SNORD125 - small nucleolar RNA, C/D box 125 snoRNA chr4-2129 chr4 75723527 75723737 + 12.3 0.000 promoter-TSS (NM_001290049) promoter-TSS (NM_001290049) -890 NM_001290049 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr22-1103 chr22 36930332 36930542 + 12.3 0.000 exon (NM_000395, exon 7 of 14) exon (NM_000395, exon 7 of 14) 16809 NM_000395 1439 Hs.592192 NM_000395 ENSG00000100368 CSF2RB CD131|CDw131|IL3RB|IL5RB|SMDP5|betaGMR colony stimulating factor 2 receptor beta common subunit protein-coding chr15-1319 chr15 75308064 75308274 + 12.3 0.000 Intergenic Intergenic 25328 NM_001145224 653643 Hs.672474 NM_001145224 ENSG00000140478 GOLGA6D - golgin A6 family member D protein-coding chr10-2719 chr10 108843001 108843211 + 12.3 0.000 Intergenic MIRb|SINE|MIR -773813 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr19-2000 chr19 16452461 16452671 + 12.3 0.000 intron (NM_021235, intron 1 of 22) FAM|SINE|Alu 19404 NM_001258374 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr9-4664 chr9 120434750 120434960 + 12.3 0.000 intron (NR_073558, intron 25 of 37) L2-3_Crp|LINE|L2 145312 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr14-1797 chr14 22630556 22630766 + 12.3 0.000 Intergenic MER89|LTR|ERV1 4183 NM_001348233 79549 NM_001348233 ENSG00000255804 OR6J1 OR6J1P|OR6J2 olfactory receptor family 6 subfamily J member 1 (gene/pseudogene) protein-coding chr2-4838 chr2 71524327 71524537 + 12.3 0.000 intron (NM_001130985, intron 12 of 54) intron (NM_001130985, intron 12 of 54) 57733 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr8-1663 chr8 27033466 27033676 + 12.3 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 15392 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA chr20-1446 chr20 52339142 52339352 + 12.3 0.000 Intergenic Intergenic -147262 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr10-1375 chr10 5590129 5590339 + 12.3 0.000 Intergenic Intergenic 5884 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr1-3363 chr1 99970253 99970463 + 12.3 0.000 promoter-TSS (NM_001271685) promoter-TSS (NM_001271685) -159 NM_001271685 23443 Hs.448979 NM_012243 ENSG00000117620 SLC35A3 AMRS solute carrier family 35 member A3 protein-coding chr7-2187 chr7 94068502 94068712 + 12.3 0.000 Intergenic Intergenic -64252 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr4-2204 chr4 127501067 127501277 + 12.3 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -131785 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr2-3007 chr2 47175096 47175306 + 12.3 0.000 promoter-TSS (NM_001305626) promoter-TSS (NM_001305626) -994 NM_001305626 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr15-2533 chr15 42549439 42549649 + 12.3 0.000 promoter-TSS (NM_153260) promoter-TSS (NM_153260) 706 NM_018097 55142 Hs.14347 NM_018097 ENSG00000137814 HAUS2 C15orf25|CEP27|HsT17025 HAUS augmin like complex subunit 2 protein-coding chr8-2107 chr8 141234178 141234388 + 12.3 0.000 intron (NM_001286646, intron 1 of 7) intron (NM_001286646, intron 1 of 7) -5709 NM_001080431 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr16-2384 chr16 67204259 67204469 + 12.3 0.000 TTS (NM_024712) TTS (NM_024712) -1969 NR_029887 442901 NR_029887 ENSG00000207948 MIR328 MIRN328|hsa-mir-328|mir-328 microRNA 328 ncRNA chr3-2847 chr3 30346176 30346386 + 12.3 0.000 Intergenic Intergenic -172587 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr3-4230 chr3 138241152 138241362 + 12.3 0.000 intron (NM_001267042, intron 10 of 20) intron (NM_001267042, intron 10 of 20) 53726 NM_001267042 25852 Hs.744868 NM_014154 ENSG00000114098 ARMC8 GID5|HSPC056|S863-2|VID28 armadillo repeat containing 8 protein-coding chr14-2419 chr14 63551580 63551790 + 12.3 0.000 Intergenic Intergenic -8290 NM_001354926 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr1-2570 chr1 27589845 27590055 + 12.3 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 13544 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chrX-768 chrX 36979012 36979222 + 12.3 0.000 Intergenic Intergenic -29242 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr6-1124 chr6 143511520 143511730 + 12.3 0.000 promoter-TSS (NM_032020) promoter-TSS (NM_032020) 95 NM_032020 2519 Hs.17680 NM_032020 ENSG00000001036 FUCA2 dJ20N2.5 alpha-L-fucosidase 2 protein-coding chr2-4052 chr2 112577943 112578153 + 12.3 0.000 TTS (NM_001137604) TTS (NM_001137604) -6399 NM_001304353 84269 Hs.375707 NM_032309 ENSG00000125611 CHCHD5 C2orf9|CHTM1|MIC14|MIX14 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding chr1-5903 chr1 9400874 9401084 + 12.3 0.000 Intergenic Intergenic 27937 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chrX-979 chrX 150379732 150379942 + 12.3 0.000 intron (NM_001177465, intron 1 of 4) L1MC4a|LINE|L1 16520 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr10-5646 chr10 97137774 97137984 + 12.3 0.000 intron (NM_003061, intron 4 of 36) MIRb|SINE|MIR 35123 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr1-14163 chr1 32677681 32677891 + 12.3 0.000 intron (NM_005610, intron 11 of 11) intron (NM_005610, intron 11 of 11) 24984 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr15-1445 chr15 77525579 77525789 + 12.3 0.000 promoter-TSS (NR_135692) promoter-TSS (NR_135692) 89 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr7-5473 chr7 41563142 41563352 + 12.3 0.000 Intergenic Intergenic -130672 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr11-2782 chr11 73913724 73913934 + 12.3 0.000 intron (NM_001267803, intron 8 of 12) L2c|LINE|L2 25048 NM_001363556 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr16-4381 chr16 49696869 49697079 + 12.3 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) -32650 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr10-5278 chr10 68459710 68459920 + 12.3 0.000 intron (NM_001080449, intron 4 of 20) AluSg|SINE|Alu 12158 NM_001080449 1763 Hs.532446 NM_001080449 ENSG00000138346 DNA2 DNA2L|hDNA2 DNA replication helicase/nuclease 2 protein-coding chr7-5935 chr7 99818378 99818588 + 12.3 0.000 Intergenic L2a|LINE|L2 -9530 NM_057096 64816 Hs.306220 NM_022820 ENSG00000021461 CYP3A43 - cytochrome P450 family 3 subfamily A member 43 protein-coding chr10-3535 chr10 74499884 74500094 + 12.3 0.000 intron (NM_001369124, intron 6 of 9) intron (NM_001369124, intron 6 of 9) 29335 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr2-5847 chr2 237810763 237810973 + 12.3 0.000 intron (NM_001080504, intron 1 of 15) LTR31|LTR|ERV1 12123 NM_001080504 375316 Hs.607265 NM_198852 ENSG00000177483 RBM44 - RNA binding motif protein 44 protein-coding chr8-2501 chr8 17180942 17181152 + 12.3 0.000 intron (NM_001362989, intron 1 of 12) intron (NM_001362989, intron 1 of 12) 23883 NM_001362989 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr2-4304 chr2 235077133 235077343 + 12.3 0.000 Intergenic Intergenic 49503 NM_001371306 chr2-3783 chr2 11406186 11406396 + 12.3 0.000 Intergenic Intergenic 12310 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA chr3-6046 chr3 50214067 50214277 + 12.3 0.000 5' UTR (NM_006841, exon 2 of 16) 5' UTR (NM_006841, exon 2 of 16) 8901 NM_006841 10991 Hs.76460 NM_006841 ENSG00000188338 SLC38A3 G17|NAT1|SN1|SNAT3 solute carrier family 38 member 3 protein-coding chr1-14456 chr1 47060661 47060871 + 12.3 0.000 Intergenic L1MDa|LINE|L1 -6465 NM_178134 199974 Hs.176588 NM_178134 ENSG00000186160 CYP4Z1 CYP4A20 cytochrome P450 family 4 subfamily Z member 1 protein-coding chr8-3075 chr8 22053528 22053738 + 12.3 0.000 promoter-TSS (NM_001114137) promoter-TSS (NM_001114137) 78 NM_001114137 2039 Hs.106124 NM_001978 ENSG00000158856 DMTN DMT|EPB49 dematin actin binding protein protein-coding chr14-775 chr14 39232886 39233096 + 12.3 0.000 promoter-TSS (NM_054024) promoter-TSS (NM_054024) -924 NM_001329214 4253 Hs.287694 NM_005930 ENSG00000150527 MIA2 CTAGE5|MEA6|MGEA|MGEA11|MGEA6|TALI MIA SH3 domain ER export factor 2 protein-coding chr17-1962 chr17 6469137 6469347 + 12.3 0.000 intron (NM_031220, intron 13 of 19) L2|LINE|L2 24787 NM_001195228 54478 Hs.592116 NM_019013 ENSG00000129195 PIMREG CATS|FAM64A|RCS1 PICALM interacting mitotic regulator protein-coding chr1-7958 chr1 185144754 185144964 + 12.3 0.000 intron (NM_030934, intron 5 of 14) intron (NM_030934, intron 5 of 14) 12094 NM_030934 81627 Hs.107149 NM_030934 ENSG00000121486 TRMT1L C1orf25|MST070|MSTP070|TRM1L|bG120K12.3 tRNA methyltransferase 1 like protein-coding chr13-1084 chr13 74290382 74290592 + 12.3 0.000 Intergenic Intergenic 59043 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr1-9549 chr1 40392328 40392538 + 12.3 0.000 promoter-TSS (NM_001198979) promoter-TSS (NM_001198979) -912 NM_001198979 64744 Hs.15200 NM_022733 ENSG00000084070 SMAP2 SMAP1L small ArfGAP2 protein-coding chr11-1979 chr11 24253378 24253588 + 12.3 0.000 Intergenic Intergenic -243570 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr13-1506 chr13 18978618 18978828 + 12.3 0.000 Intergenic Intergenic -29536 NR_026852 348021 Hs.314114 NR_026852 ENSG00000232685 LINC00442 - long intergenic non-protein coding RNA 442 ncRNA chr12-3812 chr12 67804468 67804678 + 12.3 0.000 Intergenic Intergenic -75098 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr8-1363 chr8 120727019 120727229 + 12.3 0.000 intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) -34129 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr19-1235 chr19 35900446 35900656 + 12.3 0.000 promoter-TSS (NM_001321831) promoter-TSS (NM_001321831) 111 NM_139239 84807 Hs.466531 NM_032721 ENSG00000167604 NFKBID IkBNS|IkappaBNS|TA-NFKBH NFKB inhibitor delta protein-coding chr4-2124 chr4 72900956 72901166 + 12.3 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 168655 NM_173827 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding chr4-2510 chr4 33511110 33511320 + 12.3 0.000 Intergenic MER57A-int|LTR|ERV1 528678 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr16-3504 chr16 13566229 13566439 + 12.3 0.000 Intergenic L1MB1|LINE|L1 -353823 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr7-5466 chr7 41027410 41027620 + 12.3 0.000 Intergenic Intergenic -47576 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr6-3685 chr6 156221108 156221318 + 12.3 0.000 Intergenic L1MEf|LINE|L1 -157537 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr2-3993 chr2 86496573 86496783 + 12.3 0.000 Intergenic AluJo|SINE|Alu 55217 NM_001146688 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr3-4320 chr3 172490232 172490442 + 12.3 0.000 Intergenic Intergenic 33093 NM_001190942 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL TNF superfamily member 10 protein-coding chr6-4848 chr6 86248999 86249209 + 12.3 0.000 Intergenic AluSz6|SINE|Alu -570371 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr1-3087 chr1 28194204 28194414 + 12.3 0.000 promoter-TSS (NM_001164722) promoter-TSS (NM_001164722) -373 NM_001164721 5724 Hs.77542 NM_000952 ENSG00000169403 PTAFR PAFR platelet activating factor receptor protein-coding chr4-3851 chr4 127414626 127414836 + 12.3 0.000 Intergenic MIRb|SINE|MIR -218226 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr1-4524 chr1 39661048 39661258 + 12.3 0.000 exon (NM_032526, exon 5 of 6) exon (NM_032526, exon 5 of 6) 10885 NM_032526 84618 Hs.307006 NM_032526 ENSG00000116981 NT5C1A CN-I|CN-IA|CN1|CN1A|CNI 5'-nucleotidase, cytosolic IA protein-coding chr6-3218 chr6 137278041 137278251 + 12.3 0.000 Intergenic Intergenic -58716 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr7-3460 chr7 1521934 1522144 + 12.3 0.000 Intergenic MER20|DNA|hAT-Charlie -8663 NM_002360 7975 Hs.520612 NM_002360 ENSG00000198517 MAFK NFE2U|P18 MAF bZIP transcription factor K protein-coding chr15-1588 chr15 76200846 76201056 + 12.3 0.000 intron (NM_152335, intron 9 of 10) intron (NM_152335, intron 9 of 10) -19465 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr11-2647 chr11 47997761 47997971 + 12.3 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) 17307 NM_001098503 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr16-1823 chr16 51326251 51326461 + 12.3 0.000 intron (NR_039672, intron 6 of 6) intron (NR_039672, intron 6 of 6) -175084 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chrX-2152 chrX 35562053 35562263 + 12.3 0.000 Intergenic L1PBb|LINE|L1 -236184 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr1-4558 chr1 74525811 74526021 + 12.3 0.000 intron (NM_015978, intron 23 of 24) intron (NM_015978, intron 23 of 24) -13302 NM_001364666 105378803 NM_001364665 ENSG00000162621 LRRC53 - leucine rich repeat containing 53 protein-coding chr5-5573 chr5 149460016 149460226 + 12.3 0.000 Intergenic Intergenic 29475 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr15-1496 chr15 45104281 45104491 + 12.3 0.000 intron (NM_014080, intron 18 of 33) intron (NM_014080, intron 18 of 33) 9775 NM_014080 50506 Hs.71377 NM_014080 ENSG00000140279 DUOX2 LNOX2|NOXEF2|P138-TOX|TDH6|THOX2 dual oxidase 2 protein-coding chr7-6037 chr7 109302568 109302778 + 12.3 0.000 Intergenic HERV9N-int|LTR|ERV1 -418086 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr11-4620 chr11 11219638 11219848 + 12.3 0.000 Intergenic Intergenic 133507 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr12-2196 chr12 15424943 15425153 + 12.3 0.000 intron (NM_030667, intron 1 of 26) intron (NM_030667, intron 1 of 26) 102540 NM_030667 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr16-1900 chr16 87990300 87990510 + 12.3 0.000 intron (NM_017869, intron 4 of 11) intron (NM_017869, intron 4 of 11) 20387 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr10-2737 chr10 114279425 114279635 + 12.3 0.000 intron (NM_001272046, intron 8 of 13) intron (NM_001272046, intron 8 of 13) 39916 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr13-1480 chr13 102306341 102306551 + 12.3 0.000 intron (NM_001321941, intron 1 of 5) L2c|LINE|L2 4240 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr1-5231 chr1 199302717 199302927 + 12.3 0.000 intron (NR_147896, intron 3 of 3) intron (NR_147896, intron 3 of 3) 154224 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr3-5437 chr3 174297459 174297669 + 12.3 0.000 Intergenic L2c|LINE|L2 -376768 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr11-4302 chr11 68256414 68256624 + 12.3 0.000 Intergenic Intergenic 15454 NM_022338 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr5-2069 chr5 139149913 139150123 + 12.3 0.000 intron (NM_022464, intron 1 of 9) intron (NM_022464, intron 1 of 9) 48350 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr17-6130 chr17 81378900 81379110 + 12.3 0.000 intron (NM_001347841, intron 3 of 3) intron (NM_001347841, intron 3 of 3) 6120 NM_001347841 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr13-1818 chr13 57794176 57794386 + 12.3 0.000 Intergenic Intergenic 162537 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr20-3943 chr20 33539309 33539519 + 12.3 0.000 intron (NM_001032999, intron 1 of 10) intron (NM_001032999, intron 1 of 10) -22951 NM_001039709 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr5-1331 chr5 135579024 135579234 + 12.3 0.000 promoter-TSS (NM_001349345) promoter-TSS (NM_001349345) -36 NM_001349335 153328 Hs.412418 NM_145282 ENSG00000145832 SLC25A48 - solute carrier family 25 member 48 protein-coding chr7-9177 chr7 115145571 115145781 + 12.3 0.000 intron (NR_126407, intron 2 of 4) L1MC5a|LINE|L1 66718 NR_120521 102724386 Hs.352357 NR_120521 ENSG00000225535 LINC01393 - long intergenic non-protein coding RNA 1393 ncRNA chr4-2535 chr4 60872354 60872564 + 12.3 0.000 Intergenic LTR16E2|LTR|ERVL -50160 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr20-1108 chr20 4194397 4194607 + 12.3 0.000 intron (NR_033917, intron 1 of 2) L2a|LINE|L2 1412 NR_033917 728228 Hs.636379 NR_033917 ENSG00000230176 LINC01433 - long intergenic non-protein coding RNA 1433 ncRNA chr18-757 chr18 3399336 3399546 + 12.3 0.000 Intergenic MLT2B1|LTR|ERVL -12486 NM_174886 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr12-1723 chr12 28446154 28446364 + 12.3 0.000 intron (NM_001352082, intron 9 of 13) intron (NM_001352082, intron 9 of 13) -255521 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr12-2655 chr12 21774603 21774813 + 12.3 0.000 promoter-TSS (NM_004982) promoter-TSS (NM_004982) -2 NM_004982 3764 Hs.102308 NM_004982 ENSG00000121361 KCNJ8 KIR6.1|uKATP-1 potassium voltage-gated channel subfamily J member 8 protein-coding chr3-3121 chr3 149507369 149507579 + 12.3 0.000 Intergenic MLT2F|LTR|ERVL 32777 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr10-1522 chr10 50570809 50571019 + 12.3 0.000 intron (NM_147156, intron 2 of 10) AluJo|SINE|Alu 53042 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr13-870 chr13 27045185 27045395 + 12.3 0.000 Intergenic Intergenic -80243 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr2-7038 chr2 155387228 155387438 + 12.3 0.000 Intergenic Intergenic 688638 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr8-3670 chr8 14729858 14730068 + 12.3 0.000 intron (NM_139167, intron 1 of 7) AluSz|SINE|Alu 123547 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chrX-253 chrX 150568922 150569132 + 12.3 0.000 intron (NM_000252, intron 1 of 14) CpG 430 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr1-8103 chr1 7882613 7882823 + 12.3 0.000 Intergenic L1MA4A|LINE|L1 -29227 NM_021995 10911 Hs.715862 NM_006786 ENSG00000049247 UTS2 PRO1068|U-II|UCN2|UII urotensin 2 protein-coding chr4-1712 chr4 177449003 177449213 + 12.3 0.000 Intergenic L1PB4|LINE|L1 -6605 NR_033655 175 Hs.207776 NM_000027 ENSG00000038002 AGA AGU|ASRG|GA aspartylglucosaminidase protein-coding chr8-1287 chr8 40887908 40888118 + 12.3 0.000 intron (NM_024645, intron 1 of 6) intron (NM_024645, intron 1 of 6) 9813 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr1-1801 chr1 115179475 115179685 + 12.3 0.000 Intergenic Intergenic -90077 NM_005725 10100 Hs.310458 NM_005725 ENSG00000134198 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding chr1-1546 chr1 235161308 235161518 + 12.3 0.000 promoter-TSS (NM_015014) promoter-TSS (NM_015014) -163 NR_144491 23029 Hs.535224 NM_015014 ENSG00000188739 RBM34 - RNA binding motif protein 34 protein-coding chr15-1515 chr15 55707791 55708001 + 12.3 0.000 intron (NM_173814, intron 2 of 19) intron (NM_173814, intron 2 of 19) 35256 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chrX-1278 chrX 110188796 110189006 + 12.3 0.000 Intergenic Intergenic 36159 NR_004379 692226 NR_004379 ENSG00000208883 SNORD96B U96b small nucleolar RNA, C/D box 96B snoRNA chr2-6501 chr2 181655567 181655777 + 12.3 0.000 intron (NR_027690, intron 1 of 11) intron (NR_027690, intron 1 of 11) 1433 NM_201548 375298 Hs.732358 NM_201548 ENSG00000188452 CERKL RP26 ceramide kinase like protein-coding chr2-2162 chr2 235170560 235170770 + 12.3 0.000 Intergenic Intergenic 142930 NM_001371306 chr21-613 chr21 34065137 34065347 + 12.3 0.000 Intergenic Intergenic -8336 NM_032476 64968 Hs.302742 NM_032476 ENSG00000243927 MRPS6 C21orf101|MRP-S6|RPMS6|S6mt mitochondrial ribosomal protein S6 protein-coding chr5-2830 chr5 52915349 52915559 + 12.3 0.000 intron (NM_181501, intron 14 of 28) intron (NM_181501, intron 14 of 28) -73898 NR_073105 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr3-2955 chr3 63617423 63617633 + 12.3 0.000 TTS (NM_144642) TTS (NM_144642) -35147 NM_001348756 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr6-1202 chr6 25481550 25481760 + 12.3 0.000 intron (NM_001173977, intron 11 of 36) L4_A_Mam|LINE|RTE-X -170560 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr7-1828 chr7 128322117 128322327 + 12.3 0.000 intron (NM_018077, intron 13 of 18) intron (NM_018077, intron 13 of 18) 21686 NM_018077 55131 Hs.274263 NM_018077 ENSG00000106344 RBM28 ANES RNA binding motif protein 28 protein-coding chr11-4576 chr11 128359380 128359590 + 12.3 0.000 Intergenic Intergenic 150719 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr1-4348 chr1 70227658 70227868 + 12.3 0.000 intron (NM_001350615, intron 1 of 11) intron (NM_001350615, intron 1 of 11) 6383 NM_001350614 9295 Hs.479693 NM_004768 ENSG00000116754 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine and arginine rich splicing factor 11 protein-coding chr5-5066 chr5 94295791 94296001 + 12.3 0.000 intron (NM_001145678, intron 20 of 20) L1PA7|LINE|L1 -184197 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr18-1222 chr18 41745485 41745695 + 12.3 0.000 Intergenic Intergenic -209644 NM_001308020 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr8-3149 chr8 76128054 76128264 + 12.3 0.000 Intergenic Intergenic -278495 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr7-2466 chr7 1412976 1413186 + 12.3 0.000 Intergenic CpG 46389 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr14-1685 chr14 83777512 83777722 + 12.3 0.000 Intergenic Intergenic 1134985 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr4-4731 chr4 93025458 93025668 + 12.3 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 721164 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr13-2815 chr13 102758338 102758548 + 12.3 0.000 exon (NM_001146197, exon 3 of 4) exon (NM_001146197, exon 3 of 4) 629 NM_001146197 643677 Hs.368382 NM_001146197 ENSG00000175820 CCDC168 C13orf40 coiled-coil domain containing 168 protein-coding chr1-7760 chr1 37195556 37195766 + 12.3 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 34098 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr8-2625 chr8 64690829 64691039 + 12.3 0.000 intron (NM_004820, intron 1 of 5) intron (NM_004820, intron 1 of 5) 107803 NM_001324112 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr18-2490 chr18 51332021 51332231 + 12.3 0.000 Intergenic AluSq2|SINE|Alu -59916 NR_040075 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr2-5102 chr2 17480820 17481030 + 12.3 0.000 Intergenic Intergenic 37515 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr4-3031 chr4 134028103 134028313 + 12.3 0.000 Intergenic MER5A|DNA|hAT-Charlie 173581 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr17-6654 chr17 70672403 70672613 + 12.3 0.000 Intergenic HAL1ME|LINE|L1 502973 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr7-6522 chr7 32250668 32250878 + 12.3 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 48555 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr17-3109 chr17 16584460 16584670 + 12.3 0.000 Intergenic CpG -15353 NM_001346171 57336 Hs.99724 NM_020653 ENSG00000141040 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding chr1-5061 chr1 96473890 96474100 + 12.3 0.000 Intergenic Intergenic -99870 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr2-2891 chr2 217877965 217878175 + 12.3 0.000 intron (NM_001308023, intron 15 of 29) intron (NM_001308023, intron 15 of 29) 22558 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr4-1939 chr4 101647029 101647239 + 12.3 0.000 Intergenic Intergenic -143473 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr5-1301 chr5 37668546 37668756 + 12.3 0.000 intron (NM_001345998, intron 10 of 17) intron (NM_001345998, intron 10 of 17) 166171 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr17-2379 chr17 77340985 77341195 + 12.3 0.000 intron (NM_006640, intron 1 of 10) Tigger1|DNA|TcMar-Tigger 21575 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr9-2774 chr9 109766453 109766663 + 12.3 0.000 intron (NM_001037293, intron 1 of 6) intron (NM_001037293, intron 1 of 6) -13640 NM_007203 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chrX-2475 chrX 86436458 86436668 + 12.3 0.000 intron (NM_001139515, intron 2 of 11) L1MCa|LINE|L1 173595 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr1-10176 chr1 110445411 110445621 + 12.3 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -5633 NM_032414 84432 Hs.514793 NM_032414 ENSG00000143125 PROK1 EGVEGF|PK1|PRK1 prokineticin 1 protein-coding chr3-6417 chr3 100245127 100245337 + 12.3 0.000 Intergenic MER2|DNA|TcMar-Tigger -15760 NM_018309 55773 Hs.477003 NM_018309 ENSG00000036054 TBC1D23 NS4ATP1|PCH11 TBC1 domain family member 23 protein-coding chr20-1728 chr20 43843436 43843646 + 12.3 0.000 Intergenic L2a|LINE|L2 -51177 NR_134577 105372626 Hs.130555 NR_134577 ENSG00000233277 LINC01728 - long intergenic non-protein coding RNA 1728 ncRNA chr9-2528 chr9 123357855 123358065 + 12.3 0.000 intron (NM_173689, intron 1 of 12) intron (NM_173689, intron 1 of 12) 1763 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chrX-1104 chrX 13101835 13102045 + 12.3 0.000 Intergenic Intergenic -57320 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chr1-5117 chr1 151375785 151375995 + 12.3 0.000 Intergenic AluSx4|SINE|Alu -3185 NM_001258288 8991 Hs.632460 NM_003944 ENSG00000143416 SELENBP1 EHMTO|HEL-S-134P|LPSB|MTO|SBP56|SP56|hSBP selenium binding protein 1 protein-coding chr12-2475 chr12 63826110 63826320 + 12.3 0.000 Intergenic Intergenic 2552 NR_162118 113218505 NR_162118 MIR10527 - microRNA 10527 ncRNA chr11-2975 chr11 86814925 86815135 + 12.3 0.000 intron (NR_120591, intron 1 of 4) intron (NR_120591, intron 1 of 4) 14488 NR_120592 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr3-1410 chr3 150061715 150061925 + 12.3 0.000 Intergenic Intergenic -34623 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr14-1813 chr14 38108809 38109019 + 12.3 0.000 Intergenic Intergenic -98990 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr6-2527 chr6 4115691 4115901 + 12.3 0.000 non-coding (NR_028588, exon 11 of 11) non-coding (NR_028588, exon 11 of 11) 19672 NM_001166010 10455 Hs.15250 NM_006117 ENSG00000198721 ECI2 ACBD2|DRS-1|DRS1|HCA88|PECI|dJ1013A10.3 enoyl-CoA delta isomerase 2 protein-coding chr7-4422 chr7 105304125 105304335 + 12.3 0.000 intron (NM_001350746, intron 2 of 14) intron (NM_001350746, intron 2 of 14) -5451 NM_001278273 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr12-2866 chr12 10067938 10068148 + 12.3 0.000 Intergenic Intergenic 30942 NM_001297751 51267 Hs.29549 NM_016511 ENSG00000150048 CLEC1A CLEC-1|CLEC1 C-type lectin domain family 1 member A protein-coding chr2-4924 chr2 159362822 159363032 + 12.3 0.000 intron (NM_001329858, intron 27 of 36) intron (NM_001329858, intron 27 of 36) -76224 NM_001330276 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr10-1635 chr10 87054593 87054803 + 12.3 0.000 intron (NM_001318905, intron 14 of 15) L2b|LINE|L2 34404 NM_001146157 643161 Hs.729945 NM_001146157 ENSG00000188100 FAM25A bA96C23.5 family with sequence similarity 25 member A protein-coding chr12-2359 chr12 11755524 11755734 + 12.3 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 105775 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr10-4063 chr10 35480280 35480490 + 12.3 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) -124956 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding chr7-1792 chr7 82362152 82362362 + 12.3 0.000 intron (NM_000722, intron 1 of 38) intron (NM_000722, intron 1 of 38) 81520 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr10-7187 chr10 109342720 109342930 + 12.3 0.000 Intergenic L1PA8|LINE|L1 580421 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr20-1644 chr20 20465255 20465465 + 12.3 0.000 intron (NM_020343, intron 37 of 39) intron (NM_020343, intron 37 of 39) 97256 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr6-2059 chr6 111377776 111377986 + 12.3 0.000 intron (NM_001286431, intron 14 of 34) intron (NM_001286431, intron 14 of 34) -105591 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr17-1346 chr17 42546771 42546981 + 12.3 0.000 Intergenic Intergenic -6047 NR_144397 3292 Hs.654385 NM_000413 ENSG00000108786 HSD17B1 17-beta-HSD|20-alpha-HSD|E2DH|EDH17B2|EDHB17|HSD17|SDR28C1 hydroxysteroid 17-beta dehydrogenase 1 protein-coding chr2-14124 chr2 202185639 202185849 + 12.3 0.000 intron (NM_001277372, intron 16 of 23) L4_B_Mam|LINE|RTE-X 52853 NM_001371394 chr13-908 chr13 50589675 50589885 + 12.3 0.000 Intergenic Intergenic -62331 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr3-4678 chr3 46428093 46428303 + 12.3 0.000 Intergenic HERVK3-int|LTR|ERVK -4531 NR_151704 105377068 NR_151704 ENSG00000283646 LINC02009 - long intergenic non-protein coding RNA 2009 ncRNA chr4-689 chr4 185209523 185209733 + 12.3 0.000 intron (NM_001317781, intron 1 of 18) CpG 5391 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr13-1992 chr13 28496640 28496850 + 12.3 0.000 Intergenic Intergenic -1617 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr2-3834 chr2 27706412 27706622 + 12.3 0.000 non-coding (NR_135200, exon 2 of 2) non-coding (NR_135200, exon 2 of 2) 9215 NR_135200 100129995 Hs.515878 NR_135200 ENSG00000205334 LINC01460 - long intergenic non-protein coding RNA 1460 ncRNA chr3-4017 chr3 64355563 64355773 + 12.3 0.000 Intergenic Intergenic -87495 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr13-1701 chr13 88258506 88258716 + 12.3 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 115744 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr2-9368 chr2 229040687 229040897 + 12.3 0.000 intron (NM_001330157, intron 1 of 1) L1MC4|LINE|L1 191300 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr20-2982 chr20 37881349 37881559 + 12.3 0.000 Intergenic Intergenic -21673 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr6-2900 chr6 13336647 13336857 + 12.3 0.000 Intergenic Intergenic -8169 NM_001318809 107080638 Hs.484678 NM_001318809 ENSG00000145979 TBC1D7-LOC100130357 - TBC1D7-LOC100130357 readthrough protein-coding chr10-4027 chr10 12868091 12868301 + 12.3 0.000 Intergenic Intergenic 133517 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr15-3209 chr15 72800646 72800856 + 12.3 0.000 Intergenic Intergenic -16993 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr6-1004 chr6 21588681 21588891 + 12.3 0.000 Intergenic CpG -4965 NM_003107 6659 Hs.643910 NM_003107 ENSG00000124766 SOX4 EVI16 SRY-box transcription factor 4 protein-coding chrX-1181 chrX 54462158 54462368 + 12.3 0.000 intron (NM_004463, intron 8 of 17) intron (NM_004463, intron 8 of 17) 21859 NM_058163 90121 Hs.522662 NM_058163 ENSG00000158526 TSR2 DBA14|DT1P1A10|WGG1 TSR2 ribosome maturation factor protein-coding chr10-4912 chr10 21805540 21805750 + 12.3 0.000 intron (NM_022365, intron 9 of 11) intron (NM_022365, intron 9 of 11) 198085 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr20-919 chr20 1416030 1416240 + 12.3 0.000 Intergenic L2c|LINE|L2 -22963 NR_037661 100528031 Hs.471933 NR_037661 FKBP1A-SDCBP2 - FKBP1A-SDCBP2 readthrough (NMD candidate) ncRNA chr4-4253 chr4 19194513 19194723 + 12.3 0.000 Intergenic LTR55|LTR|ERVL? -1057287 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr1-12733 chr1 58883205 58883415 + 12.3 0.000 intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 98159 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr21-232 chr21 33605738 33605948 + 12.3 0.000 intron (NM_145858, intron 6 of 12) intron (NM_145858, intron 6 of 12) -17159 NM_017613 29980 Hs.436341 NM_017613 ENSG00000159147 DONSON B17|C21orf60|MIMIS|MISSLA downstream neighbor of SON protein-coding chr12-6228 chr12 28507051 28507261 + 12.3 0.000 intron (NM_001352082, intron 13 of 13) intron (NM_001352082, intron 13 of 13) -316418 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr5-3178 chr5 74272169 74272379 + 12.3 0.000 Intergenic Intergenic 36051 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr5-1862 chr5 138849454 138849664 + 12.3 0.000 intron (NM_001323985, intron 7 of 17) intron (NM_001323985, intron 7 of 17) -25671 NM_001324000 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr14-1191 chr14 68621708 68621918 + 12.3 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 6974 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr10-4596 chr10 113103269 113103479 + 12.3 0.000 intron (NM_001146283, intron 5 of 12) (TTTTG)n|Simple_repeat|Simple_repeat -23259 NM_001349871 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr6-2141 chr6 10415793 10416003 + 12.3 0.000 promoter-TSS (NM_003220) promoter-TSS (NM_003220) -824 NM_003220 7020 Hs.519880 NM_003220 ENSG00000137203 TFAP2A AP-2|AP-2alpha|AP2TF|BOFS|TFAP2 transcription factor AP-2 alpha protein-coding chr5-4510 chr5 12897776 12897986 + 12.3 0.000 intron (NR_147005, intron 4 of 4) L2a|LINE|L2 135005 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr1-5108 chr1 145918036 145918246 + 12.3 0.000 promoter-TSS (NR_002328) promoter-TSS (NR_002328) 317 NR_073493 8799 Hs.714608 NM_003846 ENSG00000131779 PEX11B PEX11-BETA|PEX14B peroxisomal biogenesis factor 11 beta protein-coding chr19-1889 chr19 43265355 43265565 + 12.3 0.000 intron (NM_001301708, intron 2 of 4) LTR8B|LTR|ERV1 4070 NM_001301707 5678 Hs.502092 NM_002784 ENSG00000183668 PSG9 PS34|PSBG-11|PSBG-9|PSG11|PSGII pregnancy specific beta-1-glycoprotein 9 protein-coding chr1-10659 chr1 183100934 183101144 + 12.3 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 40231 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr12-2915 chr12 56501925 56502135 + 12.3 0.000 Intergenic Intergenic -10835 NR_132789 106635541 NR_132789 SNORA105C - small nucleolar RNA, H/ACA box 105C snoRNA chrX-327 chrX 41561088 41561298 + 12.3 0.000 intron (NM_003688, intron 17 of 26) intron (NM_003688, intron 17 of 26) 113733 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr2-7882 chr2 53887055 53887265 + 12.3 0.000 intron (NM_014614, intron 40 of 46) L1MB4|LINE|L1 -27127 NM_001164165 100302652 Hs.40763 NM_001164165 ENSG00000270898 GPR75-ASB3 ASB-3|ASB3 GPR75-ASB3 readthrough protein-coding chr2-1256 chr2 20635846 20636056 + 12.3 0.000 intron (NM_022460, intron 4 of 6) intron (NM_022460, intron 4 of 6) 15147 NM_022460 64342 Hs.531785 NM_022460 ENSG00000118960 HS1BP3 ETM2|HS1-BP3 HCLS1 binding protein 3 protein-coding chr19-1314 chr19 40690147 40690357 + 12.3 0.000 promoter-TSS (NM_001289980) promoter-TSS (NM_001289980) -88 NM_001289980 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr11-6898 chr11 105464310 105464520 + 12.3 0.000 Intergenic L1MA3|LINE|L1 -145658 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr2-2967 chr2 30666436 30666646 + 12.3 0.000 Intergenic MER57C2|LTR|ERV1 140905 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr15-3439 chr15 91007905 91008115 + 12.3 0.000 intron (NM_001289148, intron 5 of 21) intron (NM_001289148, intron 5 of 21) -13475 NM_199413 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding chr3-4984 chr3 15858789 15858999 + 12.3 0.000 intron (NM_001349279, intron 1 of 28) intron (NM_001349279, intron 1 of 28) 920 NM_001349279 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr9-3566 chr9 71762847 71763057 + 12.3 0.000 intron (NM_013390, intron 1 of 23) AluJb|SINE|Alu 5561 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr15-1327 chr15 85142456 85142666 + 12.3 0.000 Intergenic Intergenic 92220 NR_158179 101929479 Hs.681665 NR_158179 LOC101929479 - golgin A2 pseudogene pseudo chr1-9133 chr1 18661063 18661273 + 12.3 0.000 intron (NM_001135254, intron 4 of 8) intron (NM_001135254, intron 4 of 8) 30322 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr12-3106 chr12 24861946 24862156 + 12.3 0.000 intron (NM_001178091, intron 4 of 9) MER41B|LTR|ERV1 40171 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr14-2809 chr14 22689228 22689438 + 12.3 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -54489 NM_001348233 79549 NM_001348233 ENSG00000255804 OR6J1 OR6J1P|OR6J2 olfactory receptor family 6 subfamily J member 1 (gene/pseudogene) protein-coding chr5-2481 chr5 142717591 142717801 + 12.3 0.000 Intergenic Intergenic -19626 NM_001257205 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr10-2019 chr10 69316410 69316620 + 12.3 0.000 intron (NM_033496, intron 1 of 17) L2|LINE|L2 661 NM_033496 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr22-1338 chr22 20457669 20457879 + 12.3 0.000 intron (NR_033825, intron 4 of 5) intron (NR_033825, intron 4 of 5) -19949 NM_153334 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chr1-5507 chr1 170318696 170318906 + 12.3 0.000 Intergenic Intergenic -34593 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr8-3716 chr8 20178497 20178707 + 12.3 0.000 intron (NM_003053, intron 3 of 15) intron (NM_003053, intron 3 of 15) 4534 NM_003053 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr4-2022 chr4 2761080 2761290 + 12.3 0.000 Intergenic Intergenic -4849 NM_024309 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chrX-2197 chrX 40404359 40404569 + 12.3 0.000 Intergenic LTR26D|LTR|ERV1 141547 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr1-2559 chr1 17003938 17004148 + 12.3 0.000 intron (NM_022089, intron 6 of 28) MIR|SINE|MIR 7885 NM_001141974 23400 Hs.128866 NM_022089 ENSG00000159363 ATP13A2 CLN12|HSA9947|KRPPD|PARK9|SPG78 ATPase cation transporting 13A2 protein-coding chr8-723 chr8 66712481 66712691 + 12.3 0.000 promoter-TSS (NM_001033578) promoter-TSS (NM_001033578) -195 NM_001033578 23678 Hs.613417 NM_013257 ENSG00000104205 SGK3 CISK|SGK2|SGKL serum/glucocorticoid regulated kinase family member 3 protein-coding chr6-3295 chr6 158186180 158186390 + 12.3 0.000 intron (NM_207118, intron 2 of 2) intron (NM_207118, intron 2 of 2) 17938 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr8-4402 chr8 105715753 105715963 + 12.3 0.000 intron (NM_001362837, intron 5 of 7) MER5A|DNA|hAT-Charlie 344645 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr14-1244 chr14 104701345 104701555 + 12.3 0.000 exon (NM_022489, exon 2 of 23) exon (NM_022489, exon 2 of 23) 11832 NM_001031714 64423 Hs.24956 NM_022489 ENSG00000203485 INF2 C14orf151|C14orf173|CMTDIE|FSGS5|pp9484 inverted formin, FH2 and WH2 domain containing protein-coding chr17-2075 chr17 75559894 75560104 + 12.3 0.000 intron (NM_001015002, intron 6 of 9) intron (NM_001015002, intron 6 of 9) -28059 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr21-969 chr21 45433374 45433584 + 12.3 0.000 intron (NM_130445, intron 2 of 42) intron (NM_130445, intron 2 of 42) -8409 NR_027498 378832 Hs.517353 NM_199175 ENSG00000183535 COL18A1-AS1 C21orf123|NCRNA00175|PRED80 COL18A1 antisense RNA 1 ncRNA chr1-4739 chr1 6243409 6243619 + 12.3 0.000 promoter-TSS (NM_001024598) promoter-TSS (NM_001024598) -665 NM_001024598 390992 Hs.532677 NM_001024598 ENSG00000173673 HES3 bHLHb43 hes family bHLH transcription factor 3 protein-coding chr12-5497 chr12 126181682 126181892 + 12.3 0.000 Intergenic Intergenic 85795 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000284848 LINC02359 - long intergenic non-protein coding RNA 2359 ncRNA chr15-1523 chr15 59976091 59976301 + 12.3 0.000 Intergenic Intergenic -28115 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr15-1645 chr15 95448694 95448904 + 12.3 0.000 intron (NR_027133, intron 1 of 5) MIRb|SINE|MIR 15706 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr21-1118 chr21 36400910 36401120 + 12.3 0.000 intron (NM_005441, intron 7 of 13) AluSq2|SINE|Alu 15623 NM_005441 8208 Hs.75238 NM_005441 ENSG00000159259 CHAF1B CAF-1|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7|MPP7 chromatin assembly factor 1 subunit B protein-coding chr13-868 chr13 24289011 24289221 + 12.3 0.000 exon (NM_001166271, exon 8 of 13) exon (NM_001166271, exon 8 of 13) -18050 NM_001303138 338872 Hs.362854 NM_178540 ENSG00000240654 C1QTNF9 AQL1|C1QTNF9A|CTRP9 C1q and TNF related 9 protein-coding chr6-849 chr6 6724514 6724724 + 12.3 0.000 Intergenic Intergenic -101793 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr14-1184 chr14 62943275 62943485 + 12.3 0.000 intron (NM_139318, intron 7 of 10) intron (NM_139318, intron 7 of 10) 102078 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr10-2231 chr10 77636612 77636822 + 12.3 0.000 3' UTR (NM_001271520, exon 2 of 2) 3' UTR (NM_001271520, exon 2 of 2) 1091 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr4-2497 chr4 15328035 15328245 + 12.3 0.000 intron (NR_125911, intron 1 of 5) intron (NR_125911, intron 1 of 5) -11848 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr7-4287 chr7 17584888 17585098 + 12.3 0.000 Intergenic Intergenic -26084 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr8-1553 chr8 117978495 117978705 + 12.3 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -57687 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr6-5086 chr6 118283776 118283986 + 12.3 0.000 intron (NM_001029858, intron 6 of 7) intron (NM_001029858, intron 6 of 7) 197978 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr15-2074 chr15 62506299 62506509 + 12.3 0.000 Intergenic L2b|LINE|L2 138777 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr2-5658 chr2 197627174 197627384 + 12.3 0.000 intron (NM_144629, intron 5 of 8) L2c|LINE|L2 48308 NM_144629 130132 Hs.591615 NM_144629 ENSG00000162944 RFTN2 C2orf11|Raftlin-2 raftlin family member 2 protein-coding chr1-5355 chr1 234723175 234723385 + 12.3 0.000 promoter-TSS (NR_038856) promoter-TSS (NR_038856) -762 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA chr4-1735 chr4 8589943 8590153 + 12.3 0.000 TTS (NM_080819) TTS (NM_080819) -2612 NM_001014448 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr10-1550 chr10 102782887 102783097 + 12.3 0.000 intron (NM_017787, intron 1 of 3) intron (NM_017787, intron 1 of 3) 6771 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr19-4182 chr19 42016233 42016443 + 12.3 0.000 intron (NM_002088, intron 14 of 18) AluSq|SINE|Alu -22108 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr11-7237 chr11 5345905 5346115 + 12.3 0.000 intron (NM_001005567, intron 3 of 4) intron (NM_001005567, intron 3 of 4) -5498 NM_001004750 390058 Hs.553730 NM_001004750 ENSG00000176239 OR51B6 HOR5'Beta6 olfactory receptor family 51 subfamily B member 6 protein-coding chr10-5178 chr10 59250616 59250826 + 12.3 0.000 TTS (NM_001347851) TTS (NM_001347851) 73254 NM_001143774 84457 Hs.499704 NM_032439 ENSG00000165443 PHYHIPL - phytanoyl-CoA 2-hydroxylase interacting protein like protein-coding chr15-893 chr15 101006944 101007154 + 12.3 0.000 intron (NM_024652, intron 6 of 33) intron (NM_024652, intron 6 of 33) 87692 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr7-7350 chr7 51862143 51862353 + 12.3 0.000 Intergenic Intergenic -468992 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr12-5221 chr12 106862068 106862278 + 12.3 0.000 intron (NR_147139, intron 7 of 7) intron (NR_147139, intron 7 of 7) -87342 NR_040246 100287944 Hs.742087 NR_040246 ENSG00000257545 LOC100287944 - uncharacterized LOC100287944 ncRNA chr5-5195 chr5 112494448 112494658 + 12.3 0.000 Intergenic Intergenic 74970 NR_027706 54508 Hs.591264 NR_027706 ENSG00000278921 EPB41L4A-DT EPB41L4A-AS2 EPB41L4A divergent transcript ncRNA chr2-4055 chr2 112878078 112878288 + 12.3 0.000 Intergenic Intergenic -34788 NM_014439 27178 Hs.166371 NM_014439 ENSG00000125571 IL37 FIL1|FIL1(ZETA)|FIL1Z|IL-1F7|IL-1H|IL-1H4|IL-1RP1|IL-37|IL1F7|IL1H4|IL1RP1 interleukin 37 protein-coding chr10-2648 chr10 92279412 92279622 + 12.3 0.000 intron (NM_014912, intron 1 of 9) intron (NM_014912, intron 1 of 9) 11561 NM_014912 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr9-999 chr9 35749065 35749275 + 12.3 0.000 promoter-TSS (NM_001080496) promoter-TSS (NM_001080496) 58 NM_020944 57704 Hs.443134 NM_020944 ENSG00000070610 GBA2 AD035|NLGase|SPG46 glucosylceramidase beta 2 protein-coding chr5-4969 chr5 78833029 78833239 + 12.3 0.000 intron (NM_198709, intron 7 of 7) intron (NM_198709, intron 7 of 7) 152176 NM_000046 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr6-3904 chr6 68498041 68498251 + 12.3 0.000 Intergenic L1MEc|LINE|L1 136178 NR_125872 101928307 Hs.535825 NR_125872 ENSG00000230910 LOC101928307 - uncharacterized LOC101928307 ncRNA chr16-4081 chr16 2070287 2070497 + 12.3 0.000 intron (NM_021055, intron 16 of 40) intron (NM_021055, intron 16 of 40) 19892 NR_030646 100188847 NR_030646 ENSG00000221656 MIR1225 MIRN1225 microRNA 1225 ncRNA chr12-3399 chr12 104670010 104670220 + 12.3 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 78482 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr12-877 chr12 57214420 57214630 + 12.3 0.000 Intergenic Intergenic -2269 NM_007224 11247 Hs.745023 NM_007224 ENSG00000182379 NXPH4 NPH4 neurexophilin 4 protein-coding chr13-2199 chr13 21093508 21093718 + 12.3 0.000 Intergenic LTR82A|LTR|ERVL -32027 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chrX-400 chrX 40096638 40096848 + 12.3 0.000 intron (NM_001123384, intron 1 of 13) CpG 723 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr11-2725 chr11 8867976 8868186 + 12.3 0.000 intron (NM_005418, intron 2 of 22) intron (NM_005418, intron 2 of 22) 42870 NM_005418 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr2-4002 chr2 95574586 95574796 + 12.3 0.000 Intergenic Intergenic -17310 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chr9-3949 chr9 136454829 136455039 + 12.3 0.000 intron (NM_014866, intron 20 of 31) L2|LINE|L2 -15089 NM_019892 56623 Hs.120998 NM_019892 ENSG00000148384 INPP5E CORS1|CPD4|JBTS1|MORMS|PPI5PIV|pharbin inositol polyphosphate-5-phosphatase E protein-coding chr11-3762 chr11 46742054 46742264 + 12.3 0.000 TTS (NM_001008938) TTS (NM_001008938) 11033 NR_049846 100847020 NR_049846 ENSG00000263540 MIR5582 - microRNA 5582 ncRNA chr2-4425 chr2 134837546 134837756 + 12.3 0.000 promoter-TSS (NM_138326) promoter-TSS (NM_138326) -965 NM_001307983 130013 Hs.655728 NM_138326 ENSG00000153086 ACMSD - aminocarboxymuconate semialdehyde decarboxylase protein-coding chr1-7196 chr1 214280428 214280638 + 12.3 0.000 promoter-TSS (NM_020197) promoter-TSS (NM_020197) -626 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr5-5189 chr5 111930999 111931209 + 12.3 0.000 intron (NR_046678, intron 1 of 3) MLT1L|LTR|ERVL-MaLR 18596 NR_046678 100873948 Hs.147716 NR_046678 ENSG00000250095 NREP-AS1 - NREP antisense RNA 1 ncRNA chr22-1305 chr22 44003524 44003734 + 12.3 0.000 intron (NM_001003828, intron 2 of 13) intron (NM_001003828, intron 2 of 13) 4418 NM_001003828 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr19-3153 chr19 33419742 33419952 + 12.3 0.000 intron (NM_001166056, intron 7 of 12) intron (NM_001166056, intron 7 of 12) 45323 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr22-2096 chr22 22756703 22756913 + 12.3 0.000 Intergenic Intergenic -65968 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr11-4122 chr11 38325163 38325373 + 12.3 0.000 Intergenic Intergenic 321088 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA chr8-4185 chr8 81360726 81360936 + 12.3 0.000 Intergenic Intergenic 80295 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding chr6-4618 chr6 46250725 46250935 + 12.3 0.000 intron (NM_001251973, intron 2 of 4) LTR85a|LTR|Gypsy? -25494 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 - uncharacterized LOC101926915 ncRNA chr9-2836 chr9 126857678 126857888 + 12.3 0.000 Intergenic Intergenic -2856 NM_001099270 403341 Hs.177633 NM_203482 ENSG00000177125 ZBTB34 ZNF918 zinc finger and BTB domain containing 34 protein-coding chr2-2995 chr2 45723210 45723420 + 12.3 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 71640 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr10-2027 chr10 73279142 73279352 + 12.3 0.000 intron (NM_001367801, intron 20 of 27) AluY|SINE|Alu 26506 NR_134459 414245 Hs.568860 NR_038373 ENSG00000227540 DNAJC9-AS1 C10orf103|bA537A6.3 DNAJC9 antisense RNA 1 ncRNA chr7-2851 chr7 106190748 106190958 + 12.3 0.000 Intergenic Intergenic -78277 NM_006754 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr11-1421 chr11 47980481 47980691 + 12.3 0.000 promoter-TSS (NM_002843) promoter-TSS (NM_002843) 27 NM_001098503 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr20-1518 chr20 38034436 38034646 + 12.3 0.000 intron (NM_021215, intron 1 of 6) MIR|SINE|MIR 795 NM_021215 58490 Hs.278839 NM_021215 ENSG00000101413 RPRD1B C20orf77|CREPT|K-H|Kub5-Hera|NET60|dJ1057B20.2 regulation of nuclear pre-mRNA domain containing 1B protein-coding chr7-7441 chr7 81312840 81313050 + 12.3 0.000 Intergenic L1MA9|LINE|L1 248874 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chr17-990 chr17 47253693 47253903 + 12.3 0.000 promoter-TSS (NM_000212) promoter-TSS (NM_000212) -44 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chrX-923 chrX 21735461 21735671 + 12.3 0.000 intron (NR_045617, intron 4 of 5) intron (NR_045617, intron 4 of 5) 22550 NR_045617 23676 Hs.86492 NM_014332 ENSG00000091482 SMPX DFN6|DFNX4 small muscle protein X-linked protein-coding chr12-5269 chr12 109864773 109864983 + 12.3 0.000 intron (NM_016433, intron 1 of 4) AluSx|SINE|Alu 15663 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr3-4373 chr3 188482246 188482456 + 12.3 0.000 intron (NM_001167672, intron 2 of 9) intron (NM_001167672, intron 2 of 9) 86315 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr3-7757 chr3 64422228 64422438 + 12.3 0.000 Intergenic Intergenic -139013 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr5-2280 chr5 39420922 39421132 + 12.3 0.000 intron (NM_001343, intron 1 of 14) intron (NM_001343, intron 1 of 14) 3953 NM_001343 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB adaptor protein 2 protein-coding chr11-2092 chr11 107017470 107017680 + 12.3 0.000 intron (NM_001256424, intron 1 of 8) intron (NM_001256424, intron 1 of 8) 901 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr9-8352 chr9 116927376 116927586 + 12.3 0.000 intron (NM_014010, intron 9 of 21) intron (NM_014010, intron 9 of 21) 240176 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr19-1302 chr19 6264088 6264298 + 12.3 0.000 intron (NM_005934, intron 2 of 11) intron (NM_005934, intron 2 of 11) 15782 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr8-2459 chr8 126917731 126917941 + 12.3 0.000 Intergenic Intergenic -95318 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr5-3410 chr5 147019854 147020064 + 12.3 0.000 intron (NM_001271900, intron 2 of 10) LTR16B1|LTR|ERVL 36178 NM_181676 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr1-8368 chr1 65393689 65393899 + 12.3 0.000 intron (NM_001256864, intron 12 of 18) intron (NM_001256864, intron 12 of 18) -26858 NM_002303 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr2-11784 chr2 15045714 15045924 + 12.3 0.000 Intergenic L1M2|LINE|L1 413102 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr11-3317 chr11 109412663 109412873 + 12.3 0.000 Intergenic Intergenic -9422 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr10-5157 chr10 53941200 53941410 + 12.3 0.000 intron (NM_001354411, intron 24 of 34) L1MC1|LINE|L1 -544925 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr5-5547 chr5 147481938 147482148 + 12.3 0.000 intron (NM_001197294, intron 1 of 13) LTR40c|LTR|ERVL 28025 NM_001197294 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr11-1844 chr11 83827683 83827893 + 12.3 0.000 intron (NM_001142699, intron 17 of 27) intron (NM_001142699, intron 17 of 27) -145363 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr2-8718 chr2 157904020 157904230 + 12.3 0.000 Intergenic Intergenic -27795 NM_001111067 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr16-2224 chr16 88391389 88391599 + 12.3 0.000 Intergenic Intergenic -35977 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr14-2990 chr14 51852630 51852840 + 12.3 0.000 Intergenic Intergenic -7877 NM_001243773 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr3-4999 chr3 22810588 22810798 + 12.3 0.000 Intergenic MER44A|DNA|TcMar-Tigger 391885 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr1-7073 chr1 184638747 184638957 + 12.3 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 116006 NR_135118 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr5-4550 chr5 18378323 18378533 + 12.3 0.000 Intergenic MER46C|DNA|TcMar-Tigger 571154 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr7-5850 chr7 88760201 88760411 + 12.3 0.000 intron (NM_181646, intron 1 of 3) intron (NM_181646, intron 1 of 3) 606 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chrX-373 chrX 101348788 101348998 + 12.3 0.000 promoter-TSS (NM_004085) promoter-TSS (NM_004085) -151 NM_004085 1678 Hs.447877 NM_004085 ENSG00000126953 TIMM8A DDP|DDP1|DFN1|MTS|TIM8 translocase of inner mitochondrial membrane 8A protein-coding chr3-852 chr3 45388495 45388705 + 12.3 0.000 promoter-TSS (NM_015340) promoter-TSS (NM_015340) 24 NM_015340 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr1-6773 chr1 78408428 78408638 + 12.3 0.000 Intergenic Intergenic -82441 NM_001039585 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr13-806 chr13 114339823 114340033 + 12.3 0.000 Intergenic Intergenic -5980 NR_126391 104355150 Hs.569217 NR_126391 LINC01054 - long intergenic non-protein coding RNA 1054 ncRNA chr10-1027 chr10 98134518 98134728 + 12.3 0.000 promoter-TSS (NM_001351011) promoter-TSS (NM_001351011) -1 NM_001256620 27291 Hs.419800 NM_014472 ENSG00000166024 R3HCC1L C10orf28|GIDRP86|GIDRP88|PSORT R3H domain and coiled-coil containing 1 like protein-coding chr3-7003 chr3 170506586 170506796 + 12.3 0.000 intron (NM_020949, intron 2 of 7) intron (NM_020949, intron 2 of 7) 39406 NR_135555 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr2-9479 chr2 235820010 235820220 + 12.3 0.000 intron (NM_001037131, intron 9 of 17) AluSp|SINE|Alu -302194 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr1-5090 chr1 112700650 112700860 + 12.3 0.000 TTS (NM_001369507) TTS (NM_001369507) 6301 NM_001042679 389 Hs.502659 NM_175744 ENSG00000155366 RHOC ARH9|ARHC|H9|RHOH9 ras homolog family member C protein-coding chr22-4048 chr22 41752533 41752743 + 12.3 0.000 exon (NM_152513, exon 16 of 31) exon (NM_152513, exon 16 of 31) -47984 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr8-1095 chr8 25208880 25209090 + 12.3 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 24296 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr2-9015 chr2 196482807 196483017 + 12.3 0.000 intron (NM_001348768, intron 1 of 28) intron (NM_001348768, intron 1 of 28) 110071 NM_020760 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr6-4466 chr6 35741007 35741217 + 12.3 0.000 intron (NM_145028, intron 3 of 5) AluJb|SINE|Alu 4080 NM_145028 221481 Hs.533066 NM_145028 ENSG00000157343 ARMC12 C6orf81 armadillo repeat containing 12 protein-coding chrX-1108 chrX 15740043 15740253 + 12.3 0.000 intron (NM_007220, intron 1 of 7) intron (NM_007220, intron 1 of 7) 1878 NM_007220 11238 Hs.653287 NM_007220 ENSG00000169239 CA5B CA-VB|CAVB carbonic anhydrase 5B protein-coding chr20-984 chr20 50423292 50423502 + 12.3 0.000 Intergenic Intergenic -86924 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr11-1770 chr11 33874822 33875032 + 12.3 0.000 intron (NM_005574, intron 2 of 5) intron (NM_005574, intron 2 of 5) -5049 NM_001142315 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr2-8900 chr2 179585267 179585477 + 12.3 0.000 intron (NR_104234, intron 1 of 12) intron (NR_104234, intron 1 of 12) 534 NM_001282725 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr11-6925 chr11 109782692 109782902 + 12.3 0.000 Intergenic MIR|SINE|MIR -310595 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr16-3263 chr16 88089745 88089955 + 12.3 0.000 Intergenic Intergenic 11135 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr22-1126 chr22 40414516 40414726 + 12.3 0.000 intron (NM_020831, intron 14 of 14) L1MB4|LINE|L1 44027 NM_001350047 27352 Hs.474914 NM_015705 ENSG00000100359 SGSM3 CIP85|MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5|rabGAPLP small G protein signaling modulator 3 protein-coding chr1-13594 chr1 9181525 9181735 + 12.3 0.000 promoter-TSS (NR_132738) promoter-TSS (NR_132738) -574 NR_132738 102724571 Hs.599298 NR_132738 ENSG00000234546 LNCTAM34A GUARDIN|LINC01759 long non coding transcriptional activator of miR34a ncRNA chr8-1425 chr8 101521877 101522087 + 12.3 0.000 intron (NM_001330593, intron 1 of 15) intron (NM_001330593, intron 1 of 15) 29543 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr15-917 chr15 66303533 66303743 + 12.3 0.000 intron (NM_001323948, intron 2 of 15) intron (NM_001323948, intron 2 of 15) 9823 NM_001323946 115752 Hs.446251 NM_133375 ENSG00000166938 DIS3L DIS3L1 DIS3 like exosome 3'-5' exoribonuclease protein-coding chr5-1023 chr5 133870697 133870907 + 12.3 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -42875 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chrX-359 chrX 129604055 129604265 + 12.3 0.000 Intergenic MER61A|LTR|ERV1 50796 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr12-1749 chr12 62640776 62640986 + 12.3 0.000 Intergenic Intergenic 37195 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr9-5001 chr9 22845072 22845282 + 12.3 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 198977 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr1-5125 chr1 153535253 153535463 + 12.3 0.000 5' UTR (NM_014624, exon 2 of 3) 5' UTR (NM_014624, exon 2 of 3) 633 NM_014624 6277 Hs.275243 NM_014624 ENSG00000197956 S100A6 2A9|5B10|CABP|CACY|PRA|S10A6 S100 calcium binding protein A6 protein-coding chr2-5511 chr2 148908996 148909206 + 12.3 0.000 intron (NM_004522, intron 1 of 25) intron (NM_004522, intron 1 of 25) 33874 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr16-4647 chr16 74594560 74594770 + 12.3 0.000 intron (NR_027264, intron 1 of 26) intron (NR_027264, intron 1 of 26) 12449 NM_012201 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr20-546 chr20 62025990 62026200 + 12.3 0.000 intron (NM_003185, intron 1 of 14) intron (NM_003185, intron 1 of 14) -38707 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr1-5849 chr1 245857119 245857329 + 12.3 0.000 intron (NM_022743, intron 10 of 11) intron (NM_022743, intron 10 of 11) 560188 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr9-2580 chr9 136191365 136191575 + 12.3 0.000 Intergenic MIRb|SINE|MIR 10204 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr8-1174 chr8 28037944 28038154 + 12.3 0.000 intron (NM_001010906, intron 13 of 18) intron (NM_001010906, intron 13 of 18) -45376 NM_173833 286133 Hs.591833 NM_173833 ENSG00000168079 SCARA5 NET33|Tesr scavenger receptor class A member 5 protein-coding chr2-3675 chr2 183315678 183315888 + 12.3 0.000 Intergenic Intergenic 191340 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr16-2255 chr16 964092 964302 + 12.3 0.000 intron (NM_001352017, intron 1 of 11) AluSx3|SINE|Alu 6787 NM_001352021 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr18-1866 chr18 25491410 25491620 + 12.3 0.000 Intergenic Intergenic -139349 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr8-2083 chr8 128428310 128428520 + 12.3 0.000 intron (NR_121672, intron 2 of 7) intron (NR_121672, intron 2 of 7) 136264 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr11-1227 chr11 61891531 61891741 + 12.3 0.000 promoter-TSS (NM_021727) promoter-TSS (NM_021727) -91 NM_021727 3995 Hs.21765 NM_021727 ENSG00000221968 FADS3 CYB5RP|LLCDL3 fatty acid desaturase 3 protein-coding chr20-1237 chr20 34753993 34754203 + 12.3 0.000 intron (NM_001242539, intron 6 of 11) intron (NM_001242539, intron 6 of 11) 28306 NM_001242539 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding chr22-3897 chr22 36000657 36000867 + 12.3 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) 27775 NM_001082579 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr5-2243 chr5 13205437 13205647 + 12.3 0.000 Intergenic L1ME5|LINE|L1 -172656 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr13-1361 chr13 74325101 74325311 + 12.3 0.000 Intergenic Intergenic 93762 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr10-5488 chr10 80333848 80334058 + 12.3 0.000 Intergenic Intergenic -10792 NR_070309 84332 Hs.741500 NM_032372 ENSG00000133665 DYDC2 - DPY30 domain containing 2 protein-coding chr14-1535 chr14 60915910 60916120 + 12.3 0.000 intron (NM_001177963, intron 6 of 6) intron (NM_001177963, intron 6 of 6) 65064 NM_020810 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr6-961 chr6 33843201 33843411 + 12.3 0.000 Intergenic Intergenic -39303 NM_001040109 4295 Hs.2813 NM_002418 ENSG00000096395 MLN - motilin protein-coding chr3-3836 chr3 31338356 31338566 + 12.3 0.000 Intergenic L1MA2|LINE|L1 -176674 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr7-1875 chr7 70694609 70694819 + 12.3 0.000 intron (NM_015570, intron 5 of 18) CpG -437430 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr7-2906 chr7 131503728 131503938 + 12.3 0.000 3' UTR (NM_005397, exon 8 of 8) 3' UTR (NM_005397, exon 8 of 8) 52795 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr15-2009 chr15 45360599 45360809 + 12.3 0.000 TTS (NM_001321015) TTS (NM_001321015) 17840 NM_001482 2628 Hs.75335 NM_001482 ENSG00000171766 GATM AGAT|AT|CCDS3 glycine amidinotransferase protein-coding chr11-2256 chr11 116693045 116693255 + 12.3 0.000 Intergenic Intergenic 53728 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr2-3979 chr2 74498702 74498912 + 12.3 0.000 intron (NM_001009812, intron 1 of 1) CpG 796 NM_001282430 85474 Hs.516124 NM_001009812 ENSG00000179528 LBX2 LP3727 ladybird homeobox 2 protein-coding chr10-5127 chr10 50458859 50459069 + 12.3 0.000 intron (NM_147156, intron 5 of 10) intron (NM_147156, intron 5 of 10) 164992 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr15-1657 chr15 100733080 100733290 + 12.3 0.000 Intergenic Intergenic -116567 NR_160704 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA chr2-9129 chr2 208407281 208407491 + 12.3 0.000 intron (NM_005048, intron 1 of 12) intron (NM_005048, intron 1 of 12) 556 NM_005048 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr3-6413 chr3 100002965 100003175 + 12.3 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) -38672 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr8-3711 chr8 19984724 19984934 + 12.3 0.000 Intergenic Intergenic 45576 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr7-3677 chr7 47632882 47633092 + 12.3 0.000 Intergenic MIRb|SINE|MIR 11048 NR_108090 101929086 Hs.563487 NR_108090 ENSG00000236078 LINC01447 - long intergenic non-protein coding RNA 1447 ncRNA chr1-7578 chr1 215490252 215490462 + 12.3 0.000 Intergenic Intergenic -76947 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr20-2351 chr20 14708015 14708225 + 12.3 0.000 intron (NM_001351663, intron 5 of 17) MIR|SINE|MIR 153736 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA chr4-2835 chr4 45269926 45270136 + 12.3 0.000 Intergenic L1MA5A|LINE|L1 -543397 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr11-3360 chr11 122900854 122901064 + 12.3 0.000 intron (NM_001363089, intron 2 of 8) intron (NM_001363089, intron 2 of 8) 18029 NM_001363089 79864 Hs.164705 NM_024806 ENSG00000109944 JHY C11orf63 junctional cadherin complex regulator protein-coding chr14-2544 chr14 23159582 23159792 + 12.3 0.000 intron (NM_012244, intron 3 of 10) intron (NM_012244, intron 3 of 10) -4229 NM_001267036 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr22-2140 chr22 38632688 38632898 + 12.3 0.000 intron (NM_001013647, intron 6 of 16) intron (NM_001013647, intron 6 of 16) 23599 NM_001013647 646851 Hs.542707 NM_001013647 ENSG00000184949 FAM227A - family with sequence similarity 227 member A protein-coding chr20-1374 chr20 53025850 53026060 + 12.3 0.000 intron (NM_173485, intron 1 of 2) intron (NM_173485, intron 1 of 2) 53597 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr7-2211 chr7 111006693 111006903 + 12.3 0.000 intron (NM_032549, intron 3 of 5) L2a|LINE|L2 -84208 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr3-6389 chr3 95525543 95525753 + 12.3 0.000 Intergenic L1ME1|LINE|L1 157545 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr19-1410 chr19 44989221 44989431 + 12.3 0.000 intron (NM_001282175, intron 9 of 13) intron (NM_001282175, intron 9 of 13) -12138 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr1-6267 chr1 245235442 245235652 + 12.3 0.000 intron (NM_018012, intron 2 of 14) AluJr|SINE|Alu -1030 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr4-7018 chr4 25107163 25107373 + 12.3 0.000 Intergenic Intergenic 53181 NM_016955 51091 Hs.253305 NM_016955 ENSG00000109618 SEPSECS LP|PCH2D|SLA|SLA/LP Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase protein-coding chr5-2012 chr5 31729566 31729776 + 12.3 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 90540 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr11-2491 chr11 65624011 65624221 + 12.3 0.000 intron (NM_032223, intron 13 of 34) intron (NM_032223, intron 13 of 34) 7804 NM_032223 399909 Hs.380801 NM_032223 ENSG00000197136 PCNX3 PCNXL3 pecanex 3 protein-coding chr18-1175 chr18 21656850 21657060 + 12.3 0.000 exon (NM_001308256, exon 6 of 7) exon (NM_001308256, exon 6 of 7) 7259 NM_001308257 171586 Hs.397978 NM_138340 ENSG00000158201 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding chr2-4307 chr2 235332771 235332981 + 12.3 0.000 Intergenic Intergenic -161167 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr5-1989 chr5 168404415 168404625 + 12.3 0.000 intron (NM_001161661, intron 5 of 22) intron (NM_001161661, intron 5 of 22) -81951 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chr1-2746 chr1 35044569 35044779 + 12.3 0.000 Intergenic Intergenic -12729 NM_007167 9204 Hs.533986 NM_007167 ENSG00000163867 ZMYM6 Buster2|MYM|ZBED7|ZNF198L4|ZNF258 zinc finger MYM-type containing 6 protein-coding chr1-3359 chr1 90403246 90403456 + 12.3 0.000 Intergenic Zaphod|DNA|hAT-Tip100 -254399 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr11-1965 chr11 2146816 2147026 + 12.3 0.000 intron (NM_001042376, intron 4 of 4) intron (NM_001042376, intron 4 of 4) 2682 NM_001007139 3481 Hs.272259 NM_000612 ENSG00000167244 IGF2 C11orf43|GRDF|IGF-II|PP9974 insulin like growth factor 2 protein-coding chr2-7491 chr2 17758043 17758253 + 12.3 0.000 intron (NM_001130009, intron 1 of 13) L1ME4b|LINE|L1 4010 NM_001130009 348654 Hs.467793 NM_182625 ENSG00000178295 GEN1 Gen GEN1 Holliday junction 5' flap endonuclease protein-coding chr2-12773 chr2 85711333 85711543 + 12.3 0.000 Intergenic Intergenic 17080 NM_006433 10578 Hs.105806 NM_006433 ENSG00000115523 GNLY D2S69E|LAG-2|LAG2|NKG5|TLA519 granulysin protein-coding chr8-2074 chr8 125219202 125219412 + 12.3 0.000 intron (NM_001349486, intron 5 of 7) intron (NM_001349486, intron 5 of 7) 127447 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding chr11-9699 chr11 67672269 67672479 + 12.3 0.000 intron (NM_001031615, intron 1 of 9) AluSq|SINE|Alu 2466 NM_001354345 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr16-6563 chr16 65495924 65496134 + 12.3 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 80271 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr11-6571 chr11 71957902 71958112 + 12.3 0.000 intron (NM_018320, intron 2 of 8) L3|LINE|CR1 28961 NM_018320 55298 Hs.368554 NM_018320 ENSG00000137522 RNF121 - ring finger protein 121 protein-coding chr3-4015 chr3 64187418 64187628 + 12.3 0.000 promoter-TSS (NR_046702) promoter-TSS (NR_046702) -21 NR_046702 100874243 Hs.670840 NR_046702 ENSG00000226017 PRICKLE2-AS3 - PRICKLE2 antisense RNA 3 ncRNA chr14-646 chr14 104880647 104880857 + 12.3 0.000 intron (NM_001112726, intron 6 of 18) intron (NM_001112726, intron 6 of 18) 15438 NR_162135 113219454 NR_162135 MIR12121 - microRNA 12121 ncRNA chr3-6676 chr3 130761798 130762008 + 12.3 0.000 Intergenic L1MA3|LINE|L1 -15074 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr7-3881 chr7 107772488 107772698 + 12.3 0.000 intron (NM_000111, intron 17 of 20) intron (NM_000111, intron 17 of 20) -28012 NR_144537 101927974 Hs.432792 NR_144536 ENSG00000241764 LOC101927974 - uncharacterized LOC101927974 ncRNA chr3-6830 chr3 148078594 148078804 + 12.3 0.000 intron (NR_134937, intron 1 of 1) intron (NR_134937, intron 1 of 1) 540 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr2-6110 chr2 204150568 204150778 + 12.3 0.000 Intergenic Intergenic 213925 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr2-8273 chr2 101582196 101582406 + 12.3 0.000 Intergenic L1MB4|LINE|L1 -107189 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr19-1893 chr19 44742128 44742338 + 12.3 0.000 Intergenic Intergenic -6475 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr16-2964 chr16 10982647 10982857 + 12.3 0.000 intron (NM_015226, intron 8 of 22) intron (NM_015226, intron 8 of 22) 38188 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr11-1209 chr11 2436363 2436573 + 12.3 0.000 Intergenic Intergenic -8523 NM_000218 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr1-10274 chr1 145983079 145983289 + 12.3 0.000 Intergenic Intergenic 12560 NM_001313972 10628 Hs.533977 NM_006472 ENSG00000265972 TXNIP ARRDC6|EST01027|HHCPA78|THIF|VDUP1 thioredoxin interacting protein protein-coding chr7-2443 chr7 129665059 129665269 + 12.3 0.000 intron (NM_001293164, intron 2 of 9) L2a|LINE|L2 35086 NM_001040110 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr5-850 chr5 95961699 95961909 + 12.3 0.000 promoter-TSS (NM_012081) promoter-TSS (NM_012081) 47 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr16-1263 chr16 47732105 47732315 + 12.3 0.000 Intergenic Intergenic -126371 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA chr3-4649 chr3 33398297 33398507 + 12.3 0.000 intron (NM_001128160, intron 10 of 14) intron (NM_001128160, intron 10 of 14) 41976 NM_001128160 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr2-14508 chr2 227860616 227860826 + 12.3 0.000 Intergenic Intergenic -10655 NM_001330004 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr8-1994 chr8 89758383 89758593 + 12.3 0.000 promoter-TSS (NR_125822) promoter-TSS (NR_125822) 672 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding chr8-1041 chr8 128324304 128324514 + 12.3 0.000 Intergenic (ATA)n|Simple_repeat|Simple_repeat 174293 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr16-4284 chr16 26855344 26855554 + 12.3 0.000 Intergenic MER5B|DNA|hAT-Charlie -211478 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr5-2348 chr5 74517798 74518008 + 12.3 0.000 intron (NR_126354, intron 1 of 2) intron (NR_126354, intron 1 of 2) 19073 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA chr15-1367 chr15 78175215 78175425 + 12.3 0.000 intron (NM_015162, intron 11 of 13) intron (NM_015162, intron 11 of 13) 25958 NM_005530 3419 Hs.591110 NM_005530 ENSG00000166411 IDH3A - isocitrate dehydrogenase (NAD(+)) 3 alpha protein-coding chr1-9820 chr1 60351025 60351235 + 12.3 0.000 Intergenic Intergenic 271555 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr11-9937 chr11 76244404 76244614 + 12.3 0.000 Intergenic Intergenic -38007 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr8-1423 chr8 90671097 90671307 + 12.3 0.000 Intergenic Intergenic -25119 NM_001008495 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr1-4580 chr1 96969006 96969216 + 12.3 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -126812 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr5-4059 chr5 53215232 53215442 + 12.3 0.000 Intergenic THE1D|LTR|ERVL-MaLR 105495 NR_104654 257396 Hs.12326 NR_034107 ENSG00000247796 LOC257396 - uncharacterized LOC257396 ncRNA chr2-3061 chr2 98481568 98481778 + 12.3 0.000 intron (NM_001351428, intron 1 of 24) intron (NM_001351428, intron 1 of 24) 35663 NM_001351428 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr1-6023 chr1 62712288 62712498 + 12.3 0.000 Intergenic LTR41|LTR|ERVL -24007 NM_001272002 85440 Hs.744927 NM_033407 ENSG00000116641 DOCK7 EIEE23|ZIR2 dedicator of cytokinesis 7 protein-coding chr7-2204 chr7 102094287 102094497 + 12.3 0.000 intron (NM_001202545, intron 4 of 21) intron (NM_001202545, intron 4 of 21) -190749 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr11-6754 chr11 83567101 83567311 + 12.3 0.000 intron (NM_001142699, intron 19 of 27) intron (NM_001142699, intron 19 of 27) 115219 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr11-3119 chr11 35539905 35540115 + 12.3 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -9710 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr6-5447 chr6 158399290 158399500 + 12.3 0.000 intron (NM_020245, intron 1 of 13) intron (NM_020245, intron 1 of 13) 76413 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chrX-1124 chrX 24014917 24015127 + 12.3 0.000 intron (NM_030624, intron 2 of 3) MLT1O|LTR|ERVL-MaLR 12164 NM_030624 80311 Hs.495854 NM_030624 ENSG00000174010 KLHL15 HEL-S-305 kelch like family member 15 protein-coding chr3-2281 chr3 74962675 74962885 + 12.3 0.000 Intergenic Intergenic -251696 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr7-2477 chr7 2459313 2459523 + 12.3 0.000 Intergenic (AAACA)n|Simple_repeat|Simple_repeat 16965 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr18-1597 chr18 40381107 40381317 + 12.3 0.000 Intergenic MamTip2|DNA|hAT-Tip100 314926 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr10-2637 chr10 89207876 89208086 + 12.3 0.000 promoter-TSS (NM_003956) promoter-TSS (NM_003956) -664 NM_003956 9023 Hs.47357 NM_003956 ENSG00000138135 CH25H C25H cholesterol 25-hydroxylase protein-coding chr21-790 chr21 45540389 45540599 + 12.3 0.000 intron (NM_001352511, intron 1 of 5) intron (NM_001352511, intron 1 of 5) 1352 NM_001352512 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr8-4500 chr8 119749138 119749348 + 12.3 0.000 intron (NM_003184, intron 22 of 25) intron (NM_003184, intron 22 of 25) -75853 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr4-2963 chr4 110459780 110459990 + 12.3 0.000 Intergenic L2a|LINE|L2 -16270 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr14-1564 chr14 72233109 72233319 + 12.3 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) -283606 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr9-2833 chr9 126326120 126326330 + 12.3 0.000 promoter-TSS (NM_001011703) promoter-TSS (NM_001011703) -604 NM_033446 89853 Hs.162659 NM_033446 ENSG00000196814 MVB12B C9orf28|FAM125B multivesicular body subunit 12B protein-coding chr11-4881 chr11 44258253 44258463 + 12.3 0.000 Intergenic Intergenic 51781 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr14-2571 chr14 37848151 37848361 + 12.3 0.000 Intergenic Intergenic 53868 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr7-5204 chr7 11985769 11985979 + 12.3 0.000 Intergenic MER110-int|LTR|ERV1 -153676 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr1-4344 chr1 67439298 67439508 + 12.3 0.000 Intergenic Intergenic -9001 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr10-3416 chr10 33082266 33082476 + 12.3 0.000 intron (NR_160030, intron 1 of 2) intron (NR_160030, intron 1 of 2) 34436 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr15-672 chr15 77864863 77865073 + 12.3 0.000 Intergenic Intergenic -44068 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr13-1062 chr13 27164313 27164523 + 12.3 0.000 intron (NR_046547, intron 2 of 2) intron (NR_046547, intron 2 of 2) 7393 NM_182488 219333 Hs.42400 NM_182488 ENSG00000152484 USP12 UBH1|USP12L1 ubiquitin specific peptidase 12 protein-coding chr12-2667 chr12 46786773 46786983 + 12.3 0.000 intron (NM_018018, intron 5 of 16) intron (NM_018018, intron 5 of 16) 39119 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr4-2630 chr4 150126709 150126919 + 12.3 0.000 intron (NM_001040260, intron 2 of 15) L1MC4a|LINE|L1 48369 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr1-5092 chr1 113191338 113191548 + 12.3 0.000 Intergenic Intergenic 14810 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr3-1365 chr3 25783201 25783411 + 12.3 0.000 exon (NM_001145293, exon 1 of 12) exon (NM_001145293, exon 1 of 12) 137 NM_018297 55768 Hs.368960 NM_018297 ENSG00000151092 NGLY1 CDDG|CDG1V|PNG1|PNGase N-glycanase 1 protein-coding chr9-4346 chr9 129342165 129342375 + 12.3 0.000 intron (NR_120686, intron 3 of 3) AluSx|SINE|Alu 5347 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr10-4423 chr10 67328334 67328544 + 12.3 0.000 intron (NM_001127384, intron 5 of 17) L1PA13|LINE|L1 74971 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr2-4546 chr2 46656139 46656349 + 12.3 0.000 Intergenic Intergenic 39029 NM_014171 9419 Hs.133998 NM_014171 ENSG00000119878 CRIPT HSPC139|SSMDF CXXC repeat containing interactor of PDZ3 domain protein-coding chr16-2343 chr16 49262624 49262834 + 12.3 0.000 Intergenic L2b|LINE|L2 19109 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding chr14-1115 chr14 75579018 75579228 + 12.3 0.000 non-coding (NR_110552, exon 1 of 3) non-coding (NR_110552, exon 1 of 3) 465 NR_110552 102724153 Hs.615289 NR_110552 ENSG00000224721 LOC102724153 - uncharacterized LOC102724153 ncRNA chr7-1477 chr7 116954231 116954441 + 12.3 0.000 promoter-TSS (NR_002330) promoter-TSS (NR_002330) -2 NR_002330 93653 Hs.597516 NR_002330 ENSG00000227199 ST7-AS1 ST7AS1|ST7OT1 ST7 antisense RNA 1 ncRNA chr10-1270 chr10 3542273 3542483 + 12.3 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) -39540 NR_155744 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr7-5012 chr7 855820 856030 + 12.3 0.000 intron (NM_001367645, intron 13 of 20) intron (NM_001367645, intron 13 of 20) 14551 NM_001367708 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr11-3137 chr11 46001588 46001798 + 12.3 0.000 intron (NR_147890, intron 5 of 18) intron (NR_147890, intron 5 of 18) 79037 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr7-1978 chr7 151207700 151207910 + 12.3 0.000 TTS (NM_001369125) TTS (NM_001369125) -2309 NM_001304419 392843 Hs.649589 NM_001304419 ENSG00000278685 IQCA1L IQCA1P1 IQ motif containing with AAA domain 1 like protein-coding chr8-923 chr8 17844026 17844236 + 12.3 0.000 Intergenic Intergenic -42552 NM_001363061 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr4-1405 chr4 2077216 2077426 + 12.3 0.000 intron (NM_181808, intron 23 of 25) intron (NM_181808, intron 23 of 25) 17994 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr17-1569 chr17 29176898 29177108 + 12.3 0.000 promoter-TSS (NM_001346767) promoter-TSS (NM_001346767) -230 NM_001346767 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr19-1625 chr19 49530298 49530508 + 12.3 0.000 intron (NM_020650, intron 2 of 6) AluSx|SINE|Alu 2400 NM_020650 57333 Hs.567550 NM_020650 ENSG00000142552 RCN3 RLP49 reticulocalbin 3 protein-coding chr1-4360 chr1 109438928 109439138 + 12.3 0.000 Intergenic LTR16B|LTR|ERVL -12585 NM_002790 5686 Hs.485246 NM_002790 ENSG00000143106 PSMA5 PSC5|ZETA proteasome subunit alpha 5 protein-coding chrX-1116 chrX 20112334 20112544 + 12.3 0.000 intron (NM_152780, intron 1 of 15) intron (NM_152780, intron 1 of 15) 4201 NM_001168467 256714 Hs.127951 NM_152780 ENSG00000184368 MAP7D2 - MAP7 domain containing 2 protein-coding chr17-5843 chr17 67112323 67112533 + 12.3 0.000 intron (NM_001330447, intron 28 of 32) intron (NM_001330447, intron 28 of 32) 67874 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr2-4553 chr2 52810475 52810685 + 12.3 0.000 Intergenic LTR41|LTR|ERVL -107965 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr14-523 chr14 69363115 69363325 + 12.3 0.000 Intergenic Intergenic 35079 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr11-2579 chr11 120283147 120283357 + 12.3 0.000 intron (NM_001244682, intron 3 of 12) intron (NM_001244682, intron 3 of 12) -17320 NR_038829 649133 Hs.568902 NR_038829 ENSG00000259541 LOC649133 - uncharacterized LOC649133 ncRNA chr19-1463 chr19 48445468 48445678 + 12.3 0.000 promoter-TSS (NM_031485) promoter-TSS (NM_031485) -410 NM_031485 83743 Hs.400625 NM_031485 ENSG00000105447 GRWD1 CDW4|GRWD|RRB1|WDR28 glutamate rich WD repeat containing 1 protein-coding chr7-6124 chr7 122464294 122464504 + 12.3 0.000 intron (NM_001167940, intron 14 of 29) L1MC3|LINE|L1 -159649 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chr6-1223 chr6 109504946 109505156 + 12.3 0.000 intron (NM_001145128, intron 35 of 40) intron (NM_001145128, intron 35 of 40) -21814 NM_014797 9841 Hs.409876 NM_014797 ENSG00000112365 ZBTB24 BIF1|ICF2|PATZ2|ZNF450 zinc finger and BTB domain containing 24 protein-coding chr1-10359 chr1 154798627 154798837 + 12.3 0.000 intron (NM_170782, intron 2 of 7) MIR|SINE|MIR 61144 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr1-5296 chr1 215461130 215461340 + 12.3 0.000 Intergenic Intergenic -106069 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr21-221 chr21 45330050 45330260 + 12.3 0.000 Intergenic Intergenic 11835 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chr2-2524 chr2 186541234 186541444 + 12.3 0.000 Intergenic Intergenic -48717 NM_001145000 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr3-1363 chr3 20040020 20040230 + 12.3 0.000 promoter-TSS (NM_003884) promoter-TSS (NM_003884) -321 NM_003884 8850 Hs.533055 NM_003884 ENSG00000114166 KAT2B CAF|P/CAF|PCAF lysine acetyltransferase 2B protein-coding chr2-9320 chr2 224698565 224698775 + 12.3 0.000 Intergenic Intergenic -113273 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr1-5372 chr1 245262960 245263170 + 12.3 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) -28548 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr13-2321 chr13 32783235 32783445 + 12.3 0.000 Intergenic Intergenic 128312 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr19-2973 chr19 18257390 18257600 + 12.3 0.000 exon (NM_001145304, exon 4 of 4) exon (NM_001145304, exon 4 of 4) -2076 NR_036575 729966 Hs.710873 NR_036575 ENSG00000284797 LOC729966 - uncharacterized LOC729966 ncRNA chr13-2248 chr13 25961030 25961240 + 12.3 0.000 intron (NM_016529, intron 33 of 36) intron (NM_016529, intron 33 of 36) 89925 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr9-5806 chr9 129048452 129048662 + 12.3 0.000 intron (NR_138423, intron 4 of 16) intron (NR_138423, intron 4 of 16) 11623 NM_032809 84895 Hs.632693 NM_032809 ENSG00000148343 MIGA2 C9orf54|FAM73B mitoguardin 2 protein-coding chr7-5409 chr7 34612181 34612391 + 12.3 0.000 intron (NR_033664, intron 2 of 4) MamGypLTR3|LTR|Gypsy -45932 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr22-586 chr22 41302466 41302676 + 12.3 0.000 promoter-TSS (NM_001317930) promoter-TSS (NM_001317930) -202 NM_001317930 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr7-5283 chr7 23062647 23062857 + 12.3 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 42951 NR_046220 100775104 NR_046220 ENSG00000230658 KLHL7-DT KLHL7-AS1|PLATAK KLHL7 divergent transcript ncRNA chr2-986 chr2 118186297 118186507 + 12.3 0.000 promoter-TSS (NR_144530) promoter-TSS (NR_144530) -16 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr16-2544 chr16 29288493 29288703 + 12.3 0.000 Intergenic Intergenic -13689 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr12-4534 chr12 25671039 25671249 + 12.3 0.000 Intergenic LTR33|LTR|ERVL -22566 NM_001352234 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr7-2724 chr7 36658661 36658871 + 12.3 0.000 intron (NM_001177507, intron 3 of 19) MER81|DNA|hAT-Blackjack -58646 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr9-2075 chr9 70677431 70677641 + 12.3 0.000 intron (NM_001366143, intron 9 of 25) MER39|LTR|ERV1 132548 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr12-3154 chr12 48350298 48350508 + 12.3 0.000 intron (NM_152320, intron 1 of 6) intron (NM_152320, intron 1 of 6) 516 NM_001365805 121274 Hs.23492 NM_152320 ENSG00000167528 ZNF641 - zinc finger protein 641 protein-coding chr7-5986 chr7 102175723 102175933 + 12.3 0.000 intron (NM_001202546, intron 9 of 21) Charlie10|DNA|hAT-Charlie -109313 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr9-1779 chr9 136298410 136298620 + 12.3 0.000 intron (NR_111982, intron 3 of 9) intron (NR_111982, intron 3 of 9) 5579 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr2-8368 chr2 110880270 110880480 + 12.3 0.000 intron (NM_001371254, intron 10 of 18) L1ME4b|LINE|L1 147802 NM_001371254 chr16-1365 chr16 3939349 3939559 + 12.3 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 10990 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr22-1823 chr22 36492220 36492430 + 12.3 0.000 intron (NM_024955, intron 8 of 8) intron (NM_024955, intron 8 of 8) -10685 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr7-5585 chr7 48367757 48367967 + 12.3 0.000 exon (NM_152701, exon 32 of 62) exon (NM_152701, exon 32 of 62) 196404 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr9-1260 chr9 114214219 114214429 + 12.3 0.000 intron (NM_032888, intron 12 of 60) intron (NM_032888, intron 12 of 60) 4890 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr17-2702 chr17 59829437 59829647 + 12.3 0.000 intron (NM_001329400, intron 8 of 9) intron (NM_001329400, intron 8 of 9) -11724 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr7-6293 chr7 139277576 139277786 + 12.3 0.000 intron (NM_173569, intron 12 of 17) Charlie20a|DNA|hAT-Charlie 46444 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr7-4490 chr7 149598970 149599180 + 12.3 0.000 intron (NR_027788, intron 3 of 7) intron (NR_027788, intron 3 of 7) 25715 NR_027788 79970 Hs.520785 NM_024910 ENSG00000133624 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo chr7-2930 chr7 135672934 135673144 + 12.3 0.000 intron (NM_001130929, intron 2 of 2) intron (NM_001130929, intron 2 of 2) 10525 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr8-1346 chr8 90504284 90504494 + 12.3 0.000 Intergenic LTR108a_Mam|LTR|ERVL 101674 NR_104062 101937451 Hs.583685 NR_104062 ENSG00000253799 LINC01030 - long intergenic non-protein coding RNA 1030 ncRNA chr17-2146 chr17 40648680 40648890 + 12.3 0.000 promoter-TSS (NM_003079) promoter-TSS (NM_003079) -967 NM_003079 6605 Hs.743978 NM_003079 ENSG00000073584 SMARCE1 BAF57|CSS5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding chr11-2430 chr11 27506591 27506801 + 12.3 0.000 promoter-TSS (NM_018362) promoter-TSS (NM_018362) 73 NM_018362 55327 Hs.91393 NM_018362 ENSG00000148943 LIN7C LIN-7-C|LIN-7C|MALS-3|MALS3|VELI3 lin-7 homolog C, crumbs cell polarity complex component protein-coding chr6-3251 chr6 148536102 148536312 + 12.3 0.000 intron (NM_001346506, intron 17 of 20) intron (NM_001346506, intron 17 of 20) 27056 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr11-1604 chr11 35821975 35822185 + 12.3 0.000 Intergenic Intergenic -121901 NM_001304263 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr15-1118 chr15 91049847 91050057 + 12.3 0.000 Intergenic Intergenic 27330 NR_110104 101926911 Hs.459366 NR_110104 ENSG00000214432 VPS33B-DT - VPS33B divergent transcript ncRNA chr2-4285 chr2 232340104 232340314 + 12.3 0.000 intron (NM_001257281, intron 13 of 13) HAL1|LINE|L1 -38542 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr9-1573 chr9 38039293 38039503 + 12.3 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 29829 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr14-1180 chr14 59332829 59333039 + 12.3 0.000 intron (NM_001270520, intron 15 of 24) intron (NM_001270520, intron 15 of 24) 69493 NM_014992 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr6-2290 chr6 86607557 86607767 + 12.3 0.000 Intergenic Intergenic -329866 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr7-2905 chr7 131324163 131324373 + 12.3 0.000 intron (NR_125364, intron 3 of 5) intron (NR_125364, intron 3 of 5) 3511 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr1-7086 chr1 189445329 189445539 + 12.3 0.000 Intergenic L1PA10|LINE|L1 1030576 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr11-4072 chr11 19978890 19979100 + 12.3 0.000 intron (NM_182964, intron 10 of 37) intron (NM_182964, intron 10 of 37) -43561 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr22-1196 chr22 19036895 19037105 + 12.3 0.000 non-coding (NR_033674, exon 9 of 9) non-coding (NR_033674, exon 9 of 9) 11375 NR_024157 25786 Hs.720269 NR_024157 ENSG00000273311 DGCR11 DGS-D DiGeorge syndrome critical region gene 11 ncRNA chrX-2164 chrX 38311932 38312142 + 12.3 0.000 intron (NR_159804, intron 6 of 16) MER68|LTR|ERVL 14915 NR_159808 6103 Hs.61438 NM_000328 ENSG00000156313 RPGR COD1|CORDX1|CRD|PCDX|RP15|RP3|XLRP3|orf15 retinitis pigmentosa GTPase regulator protein-coding chrX-1235 chrX 88490952 88491162 + 12.3 0.000 Intergenic L1MB3|LINE|L1 -256168 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr8-1826 chr8 127589788 127589998 + 12.3 0.000 Intergenic L2|LINE|L2 -107754 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr3-5562 chr3 4716827 4717037 + 12.3 0.000 intron (NM_001099952, intron 39 of 58) intron (NM_001099952, intron 39 of 58) 34658 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr18-1714 chr18 2905279 2905489 + 12.3 0.000 intron (NM_032048, intron 4 of 7) L1MA3|LINE|L1 41239 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo chr20-905 chr20 46929639 46929849 + 12.3 0.000 intron (NM_172110, intron 1 of 13) FLAM_C|SINE|Alu 34901 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr11-3233 chr11 70153768 70153978 + 12.3 0.000 intron (NR_030691, intron 13 of 24) AluSx3|SINE|Alu -49290 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr3-2546 chr3 52493129 52493339 + 12.3 0.000 TTS (NM_007184) TTS (NM_007184) -2104 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr5-7411 chr5 26851319 26851529 + 12.3 0.000 Intergenic Intergenic 187162 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr8-3369 chr8 48711480 48711690 + 12.3 0.000 non-coding (NR_157027, exon 5 of 5) non-coding (NR_157027, exon 5 of 5) 23683 NR_024605 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr6-5364 chr6 150314822 150315032 + 12.3 0.000 Intergenic Intergenic -54085 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr7-2047 chr7 106611057 106611267 + 12.3 0.000 Intergenic Intergenic 49996 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr19-2660 chr19 10611503 10611713 + 12.3 0.000 intron (NM_001145056, intron 1 of 21) AluJb|SINE|Alu 9153 NM_001145056 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr1-4912 chr1 40875834 40876044 + 12.3 0.000 Intergenic Intergenic -13576 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr8-4559 chr8 126381684 126381894 + 12.3 0.000 Intergenic Intergenic 56294 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA chr22-2386 chr22 49482952 49483162 + 12.3 0.000 intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) 60409 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr16-3112 chr16 68978236 68978446 + 12.3 0.000 intron (NM_024562, intron 15 of 17) intron (NM_024562, intron 15 of 17) -127312 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr1-2633 chr1 147085523 147085733 + 12.3 0.000 promoter-TSS (NR_121645) promoter-TSS (NR_121645) -872 NR_121645 101447996 NR_121645 ENSG00000286172 RNVU1-8 RNU1-145|vU1.8 RNA, variant U1 small nuclear 8 snRNA chr3-3049 chr3 125381284 125381494 + 12.3 0.000 Intergenic AluJb|SINE|Alu -6035 NM_001348428 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr2-2998 chr2 45936304 45936514 + 12.3 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 284734 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr4-2830 chr4 43177594 43177804 + 12.3 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 284433 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr8-6092 chr8 27155438 27155648 + 12.3 0.000 Intergenic Intergenic 102861 NM_001283054 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding chr2-2052 chr2 173076199 173076409 + 12.3 0.000 intron (NM_133646, intron 1 of 11) CpG 458 NM_016653 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr10-2635 chr10 89116642 89116852 + 12.3 0.000 Intergenic Intergenic -53336 NR_039827 100616192 NR_039827 ENSG00000265375 MIR4679-2 - microRNA 4679-2 ncRNA chr16-2142 chr16 28186774 28186984 + 12.3 0.000 intron (NM_015171, intron 1 of 23) intron (NM_015171, intron 1 of 23) 25086 NM_001270940 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr1-9794 chr1 57769551 57769761 + 12.3 0.000 intron (NM_001353980, intron 3 of 5) intron (NM_001353980, intron 3 of 5) -90925 NR_104362 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr16-2305 chr16 19008282 19008492 + 12.3 0.000 intron (NM_001160364, intron 1 of 15) intron (NM_001160364, intron 1 of 15) 24100 NM_001160364 79905 Hs.187377 NM_024847 ENSG00000170537 TMC7 - transmembrane channel like 7 protein-coding chr5-740 chr5 173319581 173319791 + 12.3 0.000 intron (NM_003714, intron 3 of 3) intron (NM_003714, intron 3 of 3) 9817 NM_003714 8614 Hs.233160 NM_003714 ENSG00000113739 STC2 STC-2|STCRP stanniocalcin 2 protein-coding chr19-3251 chr19 1887535 1887745 + 12.3 0.000 Intergenic Intergenic -2144 NM_001130111 81926 Hs.465542 NM_031213 ENSG00000129968 ABHD17A C19orf27|FAM108A1 abhydrolase domain containing 17A protein-coding chr10-2715 chr10 104406903 104407113 + 12.3 0.000 intron (NM_001008723, intron 15 of 17) intron (NM_001008723, intron 15 of 17) 53175 NM_001008723 159686 Hs.253576 NM_001008723 ENSG00000120051 CFAP58 C10orf80|CCDC147|bA127L20.4|bA127L20.5|bA554P13.1 cilia and flagella associated protein 58 protein-coding chr3-1482 chr3 86951442 86951652 + 12.3 0.000 intron (NM_001320494, intron 3 of 3) intron (NM_001320494, intron 3 of 3) 39602 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr1-4676 chr1 218344979 218345189 + 12.3 0.000 promoter-TSS (NM_001135599) promoter-TSS (NM_001135599) -200 NM_001135599 7042 Hs.133379 NM_003238 ENSG00000092969 TGFB2 G-TSF|LDS4|TGF-beta2 transforming growth factor beta 2 protein-coding chr12-1621 chr12 103800476 103800686 + 12.3 0.000 intron (NM_001031701, intron 4 of 13) intron (NM_001031701, intron 4 of 13) 40653 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr1-8116 chr1 9469247 9469457 + 12.3 0.000 Intergenic AluJo|SINE|Alu -40356 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr6-984 chr6 144216450 144216660 + 12.3 0.000 Intergenic tRNA-Leu-TTA|tRNA|tRNA 66038 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding chr11-1740 chr11 116772520 116772730 + 12.3 0.000 intron (NM_032725, intron 1 of 9) CpG 362 NM_032725 84811 Hs.437341 NM_032725 ENSG00000137656 BUD13 Cwc26|fSAP71 BUD13 homolog protein-coding chr8-1891 chr8 23417521 23417731 + 12.3 0.000 Intergenic Intergenic -13506 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr3-2128 chr3 73493983 73494193 + 12.3 0.000 intron (NM_015009, intron 3 of 9) MLT1K|LTR|ERVL-MaLR -19456 NM_001303141 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr5-2671 chr5 34157010 34157220 + 12.3 0.000 intron (NR_146599, intron 7 of 11) intron (NR_146599, intron 7 of 11) -32466 NR_157803 646652 Hs.546584 NR_157803 LOC646652 - integral membrane glycoprotein-like pseudogene pseudo chr4-1931 chr4 86011209 86011419 + 12.3 0.000 TTS (NM_001318067) TTS (NM_001318067) 81298 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr11-4115 chr11 36186503 36186713 + 12.3 0.000 intron (NM_001304264, intron 4 of 5) intron (NM_001304264, intron 4 of 5) 102816 NM_001307932 29099 Hs.99443 NM_014186 ENSG00000110442 COMMD9 C11orf55|HSPC166|LINC00610 COMM domain containing 9 protein-coding chr2-3139 chr2 181393478 181393688 + 12.3 0.000 intron (NR_130784, intron 4 of 4) L2|LINE|L2 -63309 NM_001316312 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr3-2276 chr3 64444018 64444228 + 12.3 0.000 Intergenic Intergenic -117223 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr10-2787 chr10 130948419 130948629 + 12.3 0.000 Intergenic Intergenic 14144 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr1-4347 chr1 69087820 69088030 + 12.3 0.000 intron (NR_146608, intron 2 of 4) MER39|LTR|ERV1 32027 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr11-4466 chr11 104134863 104135073 + 12.3 0.000 intron (NM_025208, intron 1 of 6) MLT1O|LTR|ERVL-MaLR 29179 NM_025208 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr6-4056 chr6 135331428 135331638 + 12.3 0.000 intron (NM_017651, intron 23 of 27) intron (NM_017651, intron 23 of 27) 92373 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr4-3231 chr4 53507750 53507960 + 12.3 0.000 intron (NM_001126328, intron 3 of 10) intron (NM_001126328, intron 3 of 10) 7778 NR_046622 100873939 Hs.662372 NR_046622 ENSG00000250930 LNX1-AS1 - LNX1 antisense RNA 1 ncRNA chr3-3102 chr3 141085106 141085316 + 12.3 0.000 intron (NM_080862, intron 2 of 2) L2c|LINE|L2 33864 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr1-7203 chr1 215052701 215052911 + 12.3 0.000 intron (NM_001017424, intron 1 of 6) L2a|LINE|L2 -29931 NM_014217 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr2-4380 chr2 33573204 33573414 + 12.3 0.000 Intergenic L1ME4b|LINE|L1 -3879 NR_146505 105374454 NR_146505 LOC105374454 - uncharacterized LOC105374454 ncRNA chr2-3305 chr2 107147443 107147653 + 12.3 0.000 Intergenic Intergenic 201977 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr18-553 chr18 57730125 57730335 + 12.3 0.000 intron (NM_005603, intron 2 of 27) intron (NM_005603, intron 2 of 27) 73085 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr11-2083 chr11 94732761 94732971 + 12.3 0.000 intron (NR_135096, intron 1 of 6) intron (NR_135096, intron 1 of 6) 7489 NR_135096 105369438 Hs.568921 NR_135093 ENSG00000255929 LOC105369438 - uncharacterized LOC105369438 ncRNA chr7-2947 chr7 151075098 151075308 + 12.3 0.000 intron (NM_001199693, intron 18 of 21) intron (NM_001199693, intron 18 of 21) 5606 NM_006712 10922 Hs.647094 NM_006712 ENSG00000164896 FASTK FAST Fas activated serine/threonine kinase protein-coding chr6-1576 chr6 13615725 13615935 + 12.3 0.000 TTS (NM_001193267) TTS (NM_001193267) 495 NM_016167 51406 Hs.306242 NM_016167 ENSG00000225921 NOL7 C6orf90|PQBP3|RARG-1|dJ223E5.2 nucleolar protein 7 protein-coding chr6-2349 chr6 129332047 129332257 + 12.3 0.000 intron (NM_000426, intron 29 of 64) intron (NM_000426, intron 29 of 64) 378025 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr2-4134 chr2 165209408 165209618 + 12.3 0.000 Intergenic Intergenic -5463 NM_001081676 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr6-6969 chr6 18183293 18183503 + 12.3 0.000 intron (NM_001364614, intron 7 of 21) AluSq2|SINE|Alu 27976 NM_001364614 221656 Hs.709336 NM_153042 ENSG00000165097 KDM1B AOF1|C6orf193|LSD2 lysine demethylase 1B protein-coding chr1-1464 chr1 28885063 28885273 + 12.3 0.000 Intergenic Intergenic -1923 NM_203342 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr7-2233 chr7 131134810 131135020 + 12.3 0.000 intron (NM_001145354, intron 1 of 18) intron (NM_001145354, intron 1 of 18) 24821 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr12-2982 chr12 115404931 115405141 + 12.3 0.000 Intergenic Intergenic -720861 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr6-2488 chr6 83978575 83978785 + 12.3 0.000 Intergenic Intergenic -55092 NM_001346541 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr18-987 chr18 10558661 10558871 + 12.3 0.000 Intergenic Intergenic 32739 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr4-6137 chr4 27674933 27675143 + 12.3 0.000 Intergenic Intergenic 457559 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr6-5033 chr6 111455979 111456189 + 12.3 0.000 intron (NM_002912, intron 2 of 32) Tigger3d|DNA|TcMar-Tigger -27388 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr14-2842 chr14 28146755 28146965 + 12.3 0.000 Intergenic Intergenic -473639 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chr2-1608 chr2 172172657 172172867 + 12.3 0.000 Intergenic CpG 69756 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr3-7165 chr3 186629049 186629259 + 12.3 0.000 Intergenic L1ME4c|LINE|L1 -11245 NM_001308079 26998 Hs.81073 NM_014375 ENSG00000090512 FETUB 16G2|Gugu|IRL685 fetuin B protein-coding chr19-4219 chr19 47456812 47457022 + 12.3 0.000 intron (NM_015063, intron 3 of 9) CpG 14976 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr21-702 chr21 29145300 29145510 + 12.3 0.000 promoter-TSS (NM_001286624) promoter-TSS (NM_001286624) -172 NM_001286624 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr3-11086 chr3 185052228 185052438 + 12.3 0.000 non-coding (NR_146113, exon 49 of 49) non-coding (NR_146113, exon 49 of 49) 100727 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr2-7230 chr2 221627656 221627866 + 12.3 0.000 Intergenic L1MEi|LINE|L1 -53559 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr2-5286 chr2 65265584 65265794 + 12.3 0.000 intron (NM_001005386, intron 9 of 9) intron (NM_001005386, intron 9 of 9) 37994 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr12-1848 chr12 44154127 44154337 + 12.3 0.000 intron (NM_001286213, intron 3 of 6) intron (NM_001286213, intron 3 of 6) 318151 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr2-10947 chr2 82056365 82056575 + 12.3 0.000 Intergenic L1PA16|LINE|L1 -589524 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr6-5107 chr6 119910682 119910892 + 12.3 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -104392 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr14-3515 chr14 103323517 103323727 + 12.3 0.000 Intergenic Intergenic 6338 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr14-2503 chr14 103220331 103220541 + 12.3 0.000 Intergenic CpG -31408 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr1-13296 chr1 232247845 232248055 + 12.3 0.000 Intergenic Intergenic 267658 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr6-3124 chr6 105771766 105771976 + 12.3 0.000 Intergenic MER3|DNA|hAT-Charlie -314465 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr12-5459 chr12 124129154 124129364 + 12.3 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 156044 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr16-4675 chr16 78142330 78142540 + 12.3 0.000 intron (NM_001291997, intron 3 of 7) intron (NM_001291997, intron 3 of 7) 42781 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr12-5145 chr12 100382415 100382625 + 12.3 0.000 intron (NM_001145288, intron 2 of 10) intron (NM_001145288, intron 2 of 10) 25446 NM_001145288 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr6-2113 chr6 880031 880241 + 12.3 0.000 Intergenic Intergenic 11638 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr16-2420 chr16 74281396 74281606 + 12.3 0.000 Intergenic LTR48|LTR|ERV1 -15313 NM_002811 5713 Hs.440604 NM_002811 ENSG00000103035 PSMD7 MOV34|P40|Rpn8|S12 proteasome 26S subunit, non-ATPase 7 protein-coding chr8-1501 chr8 55691945 55692155 + 12.3 0.000 Intergenic Intergenic 81328 NM_001286661 137695 Hs.420076 NM_152417 ENSG00000167904 TMEM68 - transmembrane protein 68 protein-coding chr10-4862 chr10 15320560 15320770 + 12.3 0.000 intron (NM_001010924, intron 1 of 7) L1PA15|LINE|L1 50624 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr11-8140 chr11 55168023 55168233 + 12.3 0.000 Intergenic L1PA4|LINE|L1 -94027 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding chr10-1840 chr10 35876194 35876404 + 12.3 0.000 Intergenic Intergenic 97997 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr5-2772 chr5 170279999 170280209 + 12.3 0.000 intron (NM_005565, intron 3 of 20) MER112|DNA|hAT-Charlie 17673 NM_005565 3937 Hs.304475 NM_005565 ENSG00000043462 LCP2 SLP-76|SLP76 lymphocyte cytosolic protein 2 protein-coding chr2-6384 chr2 113405034 113405244 + 12.3 0.000 Intergenic Intergenic -32552 NM_001330342 150472 Hs.531330 NM_172003 ENSG00000136682 CBWD2 - COBW domain containing 2 protein-coding chr2-7404 chr2 8698793 8699003 + 12.3 0.000 Intergenic L3|LINE|CR1 16842 NM_002166 3398 Hs.180919 NM_002166 ENSG00000115738 ID2 GIG8|ID2A|ID2H|bHLHb26 inhibitor of DNA binding 2 protein-coding chr5-3295 chr5 119290027 119290237 + 12.3 0.000 intron (NM_001077654, intron 1 of 1) intron (NM_001077654, intron 1 of 1) 21373 NM_001286815 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr10-1717 chr10 79438350 79438560 + 12.3 0.000 intron (NM_153367, intron 1 of 3) intron (NM_153367, intron 1 of 3) 7169 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr6-933 chr6 54085437 54085647 + 12.3 0.000 intron (NM_001281746, intron 1 of 11) intron (NM_001281746, intron 1 of 11) -25901 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr7-3595 chr7 27901767 27901977 + 12.3 0.000 intron (NM_175061, intron 2 of 4) MIR3|SINE|MIR 161777 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr18-487 chr18 8219584 8219794 + 12.3 0.000 intron (NM_002845, intron 14 of 30) MER4D|LTR|ERV1 147345 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr16-2507 chr16 89756783 89756993 + 12.3 0.000 intron (NM_000135, intron 30 of 42) LTR47A|LTR|ERVL 35351 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr20-966 chr20 38826202 38826412 + 12.3 0.000 intron (NM_015568, intron 1 of 10) intron (NM_015568, intron 1 of 10) 20610 NM_001172735 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr22-1505 chr22 39382485 39382695 + 12.3 0.000 3' UTR (NM_004711, exon 4 of 4) 3' UTR (NM_004711, exon 4 of 4) -17190 NM_006116 10454 Hs.507681 NM_006116 ENSG00000100324 TAB1 3'-Tab1|MAP3K7IP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 protein-coding chr9-5908 chr9 132651269 132651479 + 12.3 0.000 intron (NR_136309, intron 7 of 18) intron (NR_136309, intron 7 of 18) 11952 NM_001322343 64794 Hs.660767 NM_022779 ENSG00000125485 DDX31 PPP1R25 DEAD-box helicase 31 protein-coding chr16-1387 chr16 75791215 75791425 + 12.3 0.000 Intergenic Intergenic -64830 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr16-4540 chr16 64681415 64681625 + 12.3 0.000 Intergenic Intergenic 440543 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-1886 chr1 162562390 162562600 + 12.3 0.000 5' UTR (NM_001324115, exon 2 of 11) 5' UTR (NM_001324115, exon 2 of 11) 596 NM_001324113 6675 Hs.492859 NM_003115 ENSG00000117143 UAP1 AGX|AGX1|AGX2|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding chr17-2847 chr17 21114689 21114899 + 12.3 0.000 Intergenic L1ME4b|LINE|L1 -12134 NM_015510 25979 Hs.386989 NM_015510 ENSG00000109016 DHRS7B CGI-93|SDR32C1 dehydrogenase/reductase 7B protein-coding chr16-4059 chr16 1561716 1561926 + 12.3 0.000 intron (NM_014714, intron 18 of 30) intron (NM_014714, intron 18 of 30) -18706 NR_135176 105371046 Hs.663325 NR_135176 ENSG00000260989 LOC105371046 - uncharacterized LOC105371046 ncRNA chr12-2306 chr12 121873001 121873211 + 12.3 0.000 intron (NM_001171993, intron 1 of 15) intron (NM_001171993, intron 1 of 15) -14247 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr22-950 chr22 23257187 23257397 + 12.3 0.000 intron (NM_004327, intron 2 of 22) intron (NM_004327, intron 2 of 22) -5475 NR_033408 26226 Hs.729589 NR_033408 ENSG00000230701 FBXW4P1 FBW3|FBXW3|SHFM3P1 F-box and WD repeat domain containing 4 pseudogene 1 pseudo chr6-4704 chr6 56689177 56689387 + 12.3 0.000 intron (NM_001144770, intron 6 of 94) MIR3|SINE|MIR -46393 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr2-6228 chr2 28272364 28272574 + 12.3 0.000 intron (NM_199193, intron 11 of 13) intron (NM_199193, intron 11 of 13) 37990 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr5-1852 chr5 132387784 132387994 + 12.3 0.000 intron (NM_003060, intron 5 of 9) intron (NM_003060, intron 5 of 9) -17973 NR_110997 553103 Hs.570908 NR_110997 ENSG00000233006 MIR3936HG SLC22A5-AS1 MIR3936 host gene ncRNA chr17-2819 chr17 15897866 15898076 + 12.3 0.000 Intergenic Intergenic -46946 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr8-3836 chr8 30491619 30491829 + 12.3 0.000 intron (NM_001008710, intron 4 of 8) intron (NM_001008710, intron 4 of 8) -106323 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr8-1053 chr8 22010442 22010652 + 12.3 0.000 Intergenic CpG -13587 NM_001286680 10361 Hs.131055 NM_182795 ENSG00000158806 NPM2 - nucleophosmin/nucleoplasmin 2 protein-coding chr17-6828 chr17 14478454 14478664 + 12.3 0.000 Intergenic Intergenic 174819 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr14-4639 chr14 54422284 54422494 + 12.3 0.000 Intergenic Intergenic 18985 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding chr12-7528 chr12 69500680 69500890 + 12.3 0.000 intron (NM_001278354, intron 2 of 9) intron (NM_001278354, intron 2 of 9) -14655 NR_145803 109623461 NR_145803 SNORA113 - small nucleolar RNA, H/ACA box 113 snoRNA chr17-3912 chr17 55962351 55962561 + 12.3 0.000 Intergenic Intergenic -191019 NM_001370326 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr22-1298 chr22 41907546 41907756 + 12.3 0.000 TTS (NM_004599) TTS (NM_004599) 6707 NR_029507 407039 NR_029507 ENSG00000207932 MIR33A MIR33|MIRN33|MIRN33A|hsa-mir-33|hsa-mir-33a|miR-33|miRNA33A|mir-33a microRNA 33a ncRNA chr10-1955 chr10 22648693 22648903 + 12.1 0.000 intron (NM_005028, intron 1 of 9) intron (NM_005028, intron 1 of 9) 65310 NM_001330062 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr17-1227 chr17 56913871 56914081 + 12.1 0.000 promoter-TSS (NM_005082) promoter-TSS (NM_005082) 73 NM_005082 7706 Hs.528952 NM_005082 ENSG00000121060 TRIM25 EFP|RNF147|Z147|ZNF147 tripartite motif containing 25 protein-coding chr3-2445 chr3 48039763 48039973 + 12.1 0.000 intron (NM_002375, intron 1 of 18) intron (NM_002375, intron 1 of 18) 48980 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr11-1898 chr11 46392395 46392605 + 12.1 0.000 promoter-TSS (NM_000741) promoter-TSS (NM_000741) -832 NM_001366692 1132 Hs.248100 NM_000741 ENSG00000180720 CHRM4 HM4|M4R cholinergic receptor muscarinic 4 protein-coding chr15-924 chr15 69326280 69326490 + 12.1 0.000 intron (NM_001104554, intron 1 of 8) MER102c|DNA|hAT-Charlie 11982 NM_001104554 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chr11-4366 chr11 74579572 74579782 + 12.1 0.000 Intergenic Intergenic -12905 NR_046409 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr10-2238 chr10 87761948 87762158 + 12.1 0.000 intron (NR_135914, intron 8 of 10) intron (NR_135914, intron 8 of 10) 56178 NM_001321969 84896 Hs.435948 NM_032810 ENSG00000138138 ATAD1 AFDC1|FNP001|HKPX4|THORASE ATPase family AAA domain containing 1 protein-coding chrX-274 chrX 41527032 41527242 + 12.1 0.000 intron (NM_003688, intron 25 of 26) intron (NM_003688, intron 25 of 26) 79677 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr3-3280 chr3 119580130 119580340 + 12.1 0.000 intron (NM_001291950, intron 1 of 2) intron (NM_001291950, intron 1 of 2) 743 NM_001125 141 Hs.99884 NM_001125 ENSG00000144843 ADPRH ARH1|hARH1 ADP-ribosylarginine hydrolase protein-coding chr19-2536 chr19 41449340 41449550 + 12.1 0.000 Intergenic AluSz6|SINE|Alu 6289 NM_001130514 100170765 Hs.649452 NM_001130514 ENSG00000204978 ERICH4 C19orf69 glutamate rich 4 protein-coding chr5-1232 chr5 154092561 154092771 + 12.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 53699 NM_005927 4238 Hs.432818 NM_005927 ENSG00000037749 MFAP3 - microfibril associated protein 3 protein-coding chr10-2284 chr10 13613567 13613777 + 12.1 0.000 intron (NM_003675, intron 6 of 9) intron (NM_003675, intron 6 of 9) 26707 NM_003675 8559 Hs.660649 NM_003675 ENSG00000165630 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding chr20-316 chr20 33674234 33674444 + 12.1 0.000 promoter-TSS (NM_031231) promoter-TSS (NM_031231) 89 NM_031231 63941 Hs.516986 NM_031231 ENSG00000125967 NECAB3 APBA2BP|EFCBP3|NIP1|STIP3|SYTIP2|XB51|dJ63M2.4|dJ63M2.5 N-terminal EF-hand calcium binding protein 3 protein-coding chr18-1163 chr18 12574367 12574577 + 12.1 0.000 intron (NM_020148, intron 2 of 15) intron (NM_020148, intron 2 of 15) 82260 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr8-1694 chr8 88278184 88278394 + 12.1 0.000 intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 49194 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr8-2474 chr8 133433516 133433726 + 12.1 0.000 Intergenic Intergenic -136317 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr19-5674 chr19 9539889 9540099 + 12.1 0.000 TTS (NR_134920) TTS (NR_134920) 1328 NR_134921 101928238 Hs.324978 NR_134920 ENSG00000278611 ZNF426-DT - ZNF426 divergent transcript ncRNA chrX-4682 chrX 84243595 84243805 + 12.1 0.000 Intergenic Intergenic -17872 NR_031690 100302191 NR_031690 ENSG00000221494 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA chr3-1635 chr3 88986936 88987146 + 12.1 0.000 Intergenic Intergenic -120580 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr12-5392 chr12 120890928 120891138 + 12.1 0.000 intron (NM_139015, intron 1 of 10) intron (NM_139015, intron 1 of 10) 13325 NM_139015 121665 Hs.507087 NM_139015 ENSG00000157837 SPPL3 IMP2|MDHV1887|PRO4332|PSH1|PSL4 signal peptide peptidase like 3 protein-coding chr19-2380 chr19 4021069 4021279 + 12.1 0.000 intron (NM_015897, intron 2 of 10) AluSz|SINE|Alu 13438 NM_015897 51588 Hs.105779 NM_015897 ENSG00000105229 PIAS4 PIAS-gamma|PIASY|Piasg|ZMIZ6 protein inhibitor of activated STAT 4 protein-coding chr3-4850 chr3 155943829 155944039 + 12.1 0.000 TTS (NM_003875) TTS (NM_003875) 73284 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr11-9326 chr11 46100046 46100256 + 12.1 0.000 intron (NR_147890, intron 1 of 18) intron (NR_147890, intron 1 of 18) 20668 NM_001352029 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr9-3409 chr9 133555634 133555844 + 12.1 0.000 exon (NM_014694, exon 11 of 19) exon (NM_014694, exon 11 of 19) 21035 NM_014694 9719 Hs.522543 NM_014694 ENSG00000197859 ADAMTSL2 ADAMTSL-2|GPHYSD1 ADAMTS like 2 protein-coding chr8-1496 chr8 50035014 50035224 + 12.1 0.000 intron (NR_135798, intron 1 of 15) intron (NR_135798, intron 1 of 15) 123712 NR_135796 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr3-3076 chr3 132595211 132595421 + 12.1 0.000 intron (NM_032169, intron 13 of 19) L2a|LINE|L2 -1954 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr11-3842 chr11 69111806 69112016 + 12.1 0.000 Intergenic Intergenic 28735 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr1-2624 chr1 109490749 109490959 + 12.1 0.000 intron (NM_001350177, intron 10 of 11) intron (NM_001350177, intron 10 of 11) -3182 NM_001134402 284613 Hs.514682 NM_182580 ENSG00000174151 CYB561D1 - cytochrome b561 family member D1 protein-coding chr13-1306 chr13 90623302 90623512 + 12.1 0.000 Intergenic Intergenic 130119 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr3-1379 chr3 52246050 52246260 + 12.1 0.000 promoter-TSS (NM_001122870) promoter-TSS (NM_001122870) -12 NM_001122870 132160 Hs.373560 NM_144641 ENSG00000164088 PPM1M PP2C-eta|PP2CE|PP2Ceta protein phosphatase, Mg2+/Mn2+ dependent 1M protein-coding chr19-3509 chr19 41093819 41094029 + 12.1 0.000 intron (NM_000766, intron 6 of 8) MamRep38|DNA|hAT 5473 NM_000766 1553 Hs.567252 NM_000766 ENSG00000197838 CYP2A13 CPAD|CYP2A|CYPIIA13 cytochrome P450 family 2 subfamily A member 13 protein-coding chr18-2129 chr18 54805890 54806100 + 12.1 0.000 Intergenic Intergenic -22482 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr3-3034 chr3 120100687 120100897 + 12.1 0.000 Intergenic Intergenic -6345 NM_001354596 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr12-4330 chr12 463042 463252 + 12.1 0.000 intron (NM_173593, intron 1 of 19) intron (NM_173593, intron 1 of 19) 3208 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr3-2200 chr3 14374348 14374558 + 12.1 0.000 Intergenic Intergenic -21885 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA chr17-5128 chr17 7636640 7636850 + 12.1 0.000 Intergenic Intergenic 6610 NM_001040 6462 Hs.632235 NM_001040 ENSG00000129214 SHBG ABP|SBP|TEBG sex hormone binding globulin protein-coding chr4-4000 chr4 1157392 1157602 + 12.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 15086 NM_012445 10417 Hs.302963 NM_012445 ENSG00000159674 SPON2 DIL-1|DIL1|M-SPONDIN|MINDIN spondin 2 protein-coding chr4-1645 chr4 94939833 94940043 + 12.1 0.000 intron (NM_001203, intron 2 of 12) intron (NM_001203, intron 2 of 12) -56294 NM_001256792 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr17-2227 chr17 1829230 1829440 + 12.1 0.000 promoter-TSS (NM_001355121) promoter-TSS (NM_001355121) 567 NM_052928 114826 Hs.514602 NM_052928 ENSG00000186532 SMYD4 ZMYND21 SET and MYND domain containing 4 protein-coding chr12-1411 chr12 25960296 25960506 + 12.1 0.000 promoter-TSS (NR_038228) promoter-TSS (NR_038228) -959 NR_038228 100506451 Hs.560092 NR_038227 RASSF8-AS1 - RASSF8 antisense RNA 1 ncRNA chr4-3679 chr4 43496179 43496389 + 12.1 0.000 Intergenic MIR|SINE|MIR -3741 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr2-2679 chr2 240723287 240723497 + 12.1 0.000 intron (NM_004321, intron 40 of 46) intron (NM_004321, intron 40 of 46) 31526 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr1-6259 chr1 236664210 236664420 + 12.1 0.000 Intergenic Intergenic -22139 NM_001103 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr10-2210 chr10 47553527 47553737 + 12.1 0.000 promoter-TSS (NR_024495) promoter-TSS (NR_024495) -109 NR_024495 642826 Hs.463017 NR_024495 BMS1P2 BMS1LP2|BMS1LP6|BMS1P6|bA144G6.1 BMS1 pseudogene 2 pseudo chr8-3505 chr8 109108384 109108594 + 12.1 0.000 intron (NM_003301, intron 2 of 2) intron (NM_003301, intron 2 of 2) 21861 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr9-4420 chr9 7101709 7101919 + 12.1 0.000 intron (NM_001353997, intron 17 of 22) intron (NM_001353997, intron 17 of 22) 344464 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr16-884 chr16 84970556 84970766 + 12.1 0.000 Intergenic Intergenic 40874 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr6-2342 chr6 125202094 125202304 + 12.1 0.000 intron (NM_001292026, intron 1 of 4) intron (NM_001292026, intron 1 of 4) -1512 NM_001318907 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr11-1426 chr11 61509060 61509270 + 12.1 0.000 TTS (NR_039708) TTS (NR_039708) 416 NM_001145077 390205 Hs.441122 NM_001145077 ENSG00000204950 LRRC10B - leucine rich repeat containing 10B protein-coding chr18-544 chr18 23826129 23826339 + 12.1 0.000 intron (NM_001127717, intron 21 of 73) intron (NM_001127717, intron 21 of 73) -46786 NM_001127718 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr8-1616 chr8 25234985 25235195 + 12.1 0.000 intron (NM_024940, intron 1 of 51) MIRb|SINE|MIR 50401 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr1-10924 chr1 209742356 209742566 + 12.1 0.000 intron (NR_134510, intron 1 of 2) MER63A|DNA|hAT-Blackjack 101 NR_134510 101930114 Hs.663934 NR_134509 ENSG00000227591 HSD11B1-AS1 - HSD11B1 antisense RNA 1 ncRNA chr9-2100 chr9 88258140 88258350 + 12.1 0.000 Intergenic Intergenic -119764 NM_001350978 645961 Hs.632070 NM_001166137 SPATA31C2 FAM75C2 SPATA31 subfamily C member 2 protein-coding chr5-2162 chr5 109655877 109656087 + 12.1 0.000 Intergenic Intergenic -33384 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr15-691 chr15 40338945 40339155 + 12.1 0.000 intron (NM_207380, intron 3 of 10) intron (NM_207380, intron 3 of 10) 1917 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 CCDC9B C15orf52 coiled-coil domain containing 9B protein-coding chr2-9329 chr2 225056465 225056675 + 12.1 0.000 Intergenic Intergenic -14102 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr4-1012 chr4 3949935 3950145 + 12.1 0.000 intron (NR_130741, intron 2 of 3) intron (NR_130741, intron 2 of 3) 5388 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr7-1115 chr7 128791178 128791388 + 12.1 0.000 promoter-TSS (NM_001363423) promoter-TSS (NM_001363423) -155 NM_001367763 64753 Hs.521178 NM_022742 ENSG00000128596 CCDC136 NAG6 coiled-coil domain containing 136 protein-coding chr8-1809 chr8 117650475 117650685 + 12.1 0.000 Intergenic Intergenic 129867 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr17-2322 chr17 48878931 48879141 + 12.1 0.000 intron (NR_135674, intron 3 of 3) (CCAT)n|Simple_repeat|Simple_repeat -13751 NM_005175 516 Hs.80986 NM_005175 ENSG00000159199 ATP5MC1 ATP5A|ATP5G|ATP5G1 ATP synthase membrane subunit c locus 1 protein-coding chr2-4191 chr2 196123782 196123992 + 12.1 0.000 Intergenic LTR19C|LTR|ERV1 47691 NM_004226 9262 Hs.88297 NM_004226 ENSG00000081320 STK17B DRAK2 serine/threonine kinase 17b protein-coding chr14-2556 chr14 28577786 28577996 + 12.1 0.000 Intergenic LTR103_Mam|LTR|ERV1? 187428 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr10-1690 chr10 6046065 6046275 + 12.1 0.000 intron (NM_000417, intron 1 of 7) intron (NM_000417, intron 1 of 7) 16197 NM_001308243 3559 Hs.231367 NM_000417 ENSG00000134460 IL2RA CD25|IDDM10|IL2R|IMD41|TCGFR|p55 interleukin 2 receptor subunit alpha protein-coding chr15-915 chr15 63722223 63722433 + 12.1 0.000 intron (NM_003922, intron 19 of 77) intron (NM_003922, intron 19 of 77) 111620 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding chr2-6349 chr2 88485477 88485687 + 12.1 0.000 Intergenic AluSx1|SINE|Alu -32889 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr6-3193 chr6 130021154 130021364 + 12.1 0.000 intron (NM_001346550, intron 1 of 21) CpG 1615 NM_001346550 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr15-856 chr15 78077203 78077413 + 12.1 0.000 exon (NM_015079, exon 1 of 13) exon (NM_015079, exon 1 of 13) 344 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr1-3717 chr1 214566939 214567149 + 12.1 0.000 Intergenic Intergenic -15442 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr7-4652 chr7 31744475 31744685 + 12.1 0.000 Intergenic Intergenic 57365 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr11-2443 chr11 34148084 34148294 + 12.1 0.000 Intergenic AluJr|SINE|Alu 42560 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr1-7412 chr1 39195387 39195597 + 12.1 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 111325 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr2-797 chr2 232896737 232896947 + 12.1 0.000 intron (NM_001114090, intron 3 of 12) intron (NM_001114090, intron 3 of 12) 21010 NR_144372 389084 Hs.657509 NM_206895 ENSG00000182600 SNORC ASCL830|C2orf82|UNQ830 secondary ossification center associated regulator of chondrocyte maturation protein-coding chr2-2588 chr2 238161983 238162193 + 12.1 0.000 intron (NM_001291832, intron 2 of 7) intron (NM_001291832, intron 2 of 7) 3118 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr20-4256 chr20 49287112 49287322 + 12.1 0.000 intron (NR_003604, intron 4 of 4) LTR10B1|LTR|ERV1 6534 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr1-4535 chr1 46174624 46174834 + 12.1 0.000 promoter-TSS (NM_005727) promoter-TSS (NM_005727) 172 NM_001328648 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr8-1361 chr8 119866931 119867141 + 12.1 0.000 Intergenic AluSx3|SINE|Alu -6619 NM_001283012 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr1-3648 chr1 76944861 76945071 + 12.1 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 77486 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr13-875 chr13 30481561 30481771 + 12.1 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) -15689 NM_001363661 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr6-2292 chr6 94328269 94328479 + 12.1 0.000 Intergenic L1PA7|LINE|L1 610071 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr12-971 chr12 25200748 25200958 + 12.1 0.000 intron (NM_001001660, intron 1 of 2) HAL1|LINE|L1 5616 NM_001001660 144363 Hs.209151 NM_001001660 ENSG00000205707 ETFRF1 LYRM5 electron transfer flavoprotein regulatory factor 1 protein-coding chr4-3481 chr4 129903467 129903677 + 12.1 0.000 intron (NR_151713, intron 12 of 16) intron (NR_151713, intron 12 of 16) 131953 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr11-968 chr11 12009333 12009543 + 12.1 0.000 promoter-TSS (NM_001330220) promoter-TSS (NM_001330220) -68 NM_013253 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr1-2374 chr1 85201023 85201233 + 12.1 0.000 promoter-TSS (NM_032184) promoter-TSS (NM_032184) -112 NM_032184 84144 Hs.533853 NM_032184 ENSG00000097096 SYDE2 - synapse defective Rho GTPase homolog 2 protein-coding chr6-1560 chr6 160930832 160931042 + 12.1 0.000 Intergenic Intergenic -60790 NM_001291958 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr11-4164 chr11 49006469 49006679 + 12.1 0.000 Intergenic Intergenic -25026 NM_001206626 283116 Hs.448644 NM_001206626 ENSG00000182053 TRIM49B - tripartite motif containing 49B protein-coding chr2-5083 chr2 10620628 10620838 + 12.1 0.000 intron (NR_048552, intron 12 of 19) intron (NR_048552, intron 12 of 19) 69242 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr11-1270 chr11 47255078 47255288 + 12.1 0.000 intron (NM_001130102, intron 1 of 8) intron (NM_001130102, intron 1 of 8) -2524 NM_001363595 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr5-2488 chr5 148908960 148909170 + 12.1 0.000 Intergenic Intergenic 82472 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr21-748 chr21 42117408 42117618 + 12.1 0.000 intron (NM_001004416, intron 14 of 22) intron (NM_001004416, intron 14 of 22) -8979 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr11-5077 chr11 113836241 113836451 + 12.1 0.000 intron (NM_001346268, intron 3 of 20) intron (NM_001346268, intron 3 of 20) 39226 NM_001346267 57646 Hs.503891 NM_020886 ENSG00000048028 USP28 - ubiquitin specific peptidase 28 protein-coding chr7-2908 chr7 131895916 131896126 + 12.1 0.000 Intergenic MER45A|DNA|hAT-Tip100 -14199 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chrX-412 chrX 153985381 153985591 + 12.1 0.000 Intergenic Intergenic -4310 NR_036175 100422877 NR_036175 ENSG00000283694 MIR3202-2 mir-3202-2 microRNA 3202-2 ncRNA chr10-5110 chr10 48962422 48962632 + 12.1 0.000 intron (NM_020945, intron 53 of 61) intron (NM_020945, intron 53 of 61) 23060 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr7-2230 chr7 129958775 129958985 + 12.1 0.000 Intergenic Intergenic -5920 NM_001202498 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr13-809 chr13 20359464 20359674 + 12.1 0.000 Intergenic Intergenic 74277 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr2-1978 chr2 27977803 27978013 + 12.1 0.000 intron (NM_199193, intron 4 of 13) L3|LINE|CR1 -18459 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA chr5-8745 chr5 146432471 146432681 + 12.1 0.000 Intergenic Intergenic -14757 NM_006706 10915 Hs.443465 NM_006706 ENSG00000113649 TCERG1 CA150|TAF2S|Urn1 transcription elongation regulator 1 protein-coding chr1-3009 chr1 221725072 221725282 + 12.1 0.000 intron (NR_111940, intron 1 of 2) intron (NR_111940, intron 1 of 2) 11723 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr16-1681 chr16 88186617 88186827 + 12.1 0.000 Intergenic CpG -7559 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr22-848 chr22 49827175 49827385 + 12.1 0.000 intron (NM_001304808, intron 1 of 12) CpG 593 NM_001304808 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr20-1436 chr20 44497222 44497432 + 12.1 0.000 TTS (NM_006811) TTS (NM_006811) 21453 NM_001261839 79183 Hs.283869 NM_024331 ENSG00000124120 TTPAL C20orf121 alpha tocopherol transfer protein like protein-coding chr6-1533 chr6 43838520 43838730 + 12.1 0.000 Intergenic Intergenic 13708 NR_149142 285857 Hs.582798 NR_149142 ENSG00000283215 LINC02537 - long intergenic non-protein coding RNA 2537 ncRNA chr16-2824 chr16 71537205 71537415 + 12.1 0.000 exon (NM_005769, exon 2 of 2) exon (NM_005769, exon 2 of 2) 10884 NM_001166395 10164 Hs.251383 NM_005769 ENSG00000140835 CHST4 GST3|GlcNAc6ST2|HECGLCNAC6ST|LSST carbohydrate sulfotransferase 4 protein-coding chr5-1735 chr5 157328583 157328793 + 12.1 0.000 intron (NM_001037333, intron 19 of 30) L2b|LINE|L2 16989 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr1-6748 chr1 67747721 67747931 + 12.1 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 62625 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr5-3219 chr5 89969050 89969260 + 12.1 0.000 Intergenic Intergenic 47565 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr16-3080 chr16 65010130 65010340 + 12.1 0.000 intron (NM_001797, intron 2 of 12) intron (NM_001797, intron 2 of 12) 111828 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr4-2793 chr4 25717858 25718068 + 12.1 0.000 Intergenic Intergenic 61499 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr7-2705 chr7 27516793 27517003 + 12.1 0.000 Intergenic Intergenic -99076 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr1-8620 chr1 197811637 197811847 + 12.1 0.000 Intergenic Intergenic -36262 NM_144977 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr12-980 chr12 56526690 56526900 + 12.1 0.000 intron (NM_002898, intron 1 of 13) intron (NM_002898, intron 1 of 13) 4975 NM_002898 5939 Hs.505729 NM_002898 ENSG00000076067 RBMS2 SCR3 RNA binding motif single stranded interacting protein 2 protein-coding chr20-569 chr20 31747785 31747995 + 12.1 0.000 intron (NM_012112, intron 2 of 17) intron (NM_012112, intron 2 of 17) 8600 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr20-950 chr20 33060962 33061172 + 12.1 0.000 intron (NM_182658, intron 4 of 14) intron (NM_182658, intron 4 of 14) 5736 NM_182658 359710 Hs.472442 NM_182658 ENSG00000186190 BPIFB3 C20orf185|LPLUNC3|RYA3 BPI fold containing family B member 3 protein-coding chr14-2595 chr14 53047396 53047606 + 12.1 0.000 intron (NM_030637, intron 11 of 11) intron (NM_030637, intron 11 of 11) -96404 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr12-1607 chr12 57416498 57416708 + 12.1 0.000 intron (NM_001351204, intron 1 of 25) AluSx3|SINE|Alu 14440 NM_001330121 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr22-1279 chr22 35312530 35312740 + 12.1 0.000 intron (NR_156428, intron 1 of 13) MIR|SINE|MIR 12741 NM_005488 10043 Hs.474705 NM_005488 ENSG00000100284 TOM1 - target of myb1 membrane trafficking protein protein-coding chr6-1952 chr6 126773091 126773301 + 12.1 0.000 Intergenic Intergenic 288565 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr10-2544 chr10 61486727 61486937 + 12.1 0.000 intron (NR_120643, intron 5 of 5) (AGT)n|Simple_repeat|Simple_repeat 6791 NR_120645 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr14-1735 chr14 58815418 58815628 + 12.1 0.000 Intergenic Intergenic -12765 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr11-7063 chr11 120628915 120629125 + 12.1 0.000 intron (NM_001282470, intron 1 of 19) L2c|LINE|L2 64584 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr7-4003 chr7 140276036 140276246 + 12.1 0.000 Intergenic Intergenic 98880 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr11-5523 chr11 87871839 87872049 + 12.1 0.000 Intergenic L1ME3A|LINE|L1 -152533 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr17-2640 chr17 8340431 8340641 + 12.1 0.000 intron (NM_153007, intron 1 of 2) intron (NM_153007, intron 1 of 2) 696 NM_153007 146852 Hs.186045 NM_153007 ENSG00000184650 ODF4 CT134|CT136|OPPO1 outer dense fiber of sperm tails 4 protein-coding chr20-875 chr20 17579372 17579582 + 12.1 0.000 intron (NM_006870, intron 1 of 3) AluJo|SINE|Alu 9402 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr18-1993 chr18 40371852 40372062 + 12.1 0.000 Intergenic Intergenic 305671 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr2-2827 chr2 94986556 94986766 + 12.1 0.000 Intergenic L1MC5|LINE|L1 -38994 NM_022438 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr1-5002 chr1 64824119 64824329 + 12.1 0.000 intron (NM_001366165, intron 11 of 11) intron (NM_001366165, intron 11 of 11) 79149 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr13-1577 chr13 37029832 37030042 + 12.1 0.000 intron (NM_001014286, intron 12 of 25) intron (NM_001014286, intron 12 of 25) 29151 NM_181503 11340 Hs.294041 NM_181503 ENSG00000120699 EXOSC8 CIP3|EAP2|OIP2|PCH1C|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding chr1-11233 chr1 246613331 246613541 + 12.1 0.000 intron (NM_152609, intron 2 of 10) intron (NM_152609, intron 2 of 10) 46980 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding chr6-790 chr6 136761089 136761299 + 12.1 0.000 intron (NM_005923, intron 1 of 29) MLT1A0|LTR|ERVL-MaLR -22853 NR_134635 101928429 Hs.672896 NR_134635 LOC101928429 - uncharacterized LOC101928429 ncRNA chr1-4529 chr1 44495840 44496050 + 12.1 0.000 intron (NM_001319957, intron 1 of 13) L2|LINE|L2 -49548 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr9-4014 chr9 36769002 36769212 + 12.1 0.000 Intergenic Intergenic 54492 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr1-11814 chr1 28589343 28589553 + 12.1 0.000 Intergenic Harlequin-int|LTR|ERV1 -2817 NM_152304 115273 Hs.652321 NM_152304 ENSG00000188060 RAB42 - RAB42, member RAS oncogene family protein-coding chr21-568 chr21 45394306 45394516 + 12.1 0.000 Intergenic Intergenic -10754 NM_130445 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr3-2733 chr3 124697126 124697336 + 12.1 0.000 intron (NM_007064, intron 21 of 26) intron (NM_007064, intron 21 of 26) -33135 NR_033437 7372 Hs.2057 NM_000373 ENSG00000114491 UMPS OPRT uridine monophosphate synthetase protein-coding chr2-7184 chr2 208589821 208590031 + 12.1 0.000 intron (NR_136588, intron 2 of 5) intron (NR_136588, intron 2 of 5) 47284 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr12-3458 chr12 116978087 116978297 + 12.1 0.000 non-coding (NR_103809, exon 4 of 4) non-coding (NR_103809, exon 4 of 4) 9145 NR_103809 100506551 Hs.657861 NR_103809 ENSG00000257279 LOC100506551 - uncharacterized LOC100506551 ncRNA chr5-1594 chr5 15510924 15511134 + 12.1 0.000 intron (NM_001278317, intron 1 of 3) intron (NM_001278317, intron 1 of 3) 9591 NM_001278317 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr4-2410 chr4 92398148 92398358 + 12.1 0.000 intron (NM_001286838, intron 1 of 14) L1MC5a|LINE|L1 93854 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr17-1450 chr17 40364539 40364749 + 12.1 0.000 promoter-TSS (NM_152219) promoter-TSS (NM_152219) 93 NM_152219 125111 Hs.444663 NM_152219 ENSG00000183153 GJD3 CX31.9|Cx30.2|GJA11|GJC1 gap junction protein delta 3 protein-coding chr2-1572 chr2 42014490 42014700 + 12.1 0.000 Intergenic SVA_D|Retroposon|SVA -33426 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr2-9085 chr2 203206023 203206233 + 12.1 0.000 intron (NM_001114132, intron 50 of 54) HAL1b|LINE|L1 -32313 NM_177538 57404 Hs.446065 NM_020674 ENSG00000119004 CYP20A1 CYP-M cytochrome P450 family 20 subfamily A member 1 protein-coding chr8-1996 chr8 90341041 90341251 + 12.1 0.000 intron (NR_051989, intron 2 of 3) THE1A-int|LTR|ERVL-MaLR 119658 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr3-2746 chr3 136818333 136818543 + 12.1 0.000 promoter-TSS (NM_025246) promoter-TSS (NM_025246) -581 NM_001097599 80723 Hs.477692 NM_025246 ENSG00000168917 SLC35G2 TMEM22 solute carrier family 35 member G2 protein-coding chr20-633 chr20 47171211 47171421 + 12.1 0.000 intron (NM_172110, intron 11 of 13) L2a|LINE|L2 4349 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA chr7-3743 chr7 73521267 73521477 + 12.1 0.000 intron (NM_001370402, intron 1 of 18) CpG 921 NM_001370402 9031 Hs.743372 NM_023005 ENSG00000009954 BAZ1B WBSCR10|WBSCR9|WSTF bromodomain adjacent to zinc finger domain 1B protein-coding chr6-5083 chr6 117605272 117605482 + 12.1 0.000 Intergenic Intergenic -2866 NM_020399 57120 Hs.191539 NM_020399 ENSG00000047932 GOPC CAL|FIG|GOPC1|PIST|dJ94G16.2 golgi associated PDZ and coiled-coil motif containing protein-coding chr10-7434 chr10 6139134 6139344 + 12.1 0.000 Intergenic L1MC4|LINE|L1 -5682 NM_001145443 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr1-5244 chr1 201876267 201876477 + 12.1 0.000 3' UTR (NM_018085, exon 24 of 24) 3' UTR (NM_018085, exon 24 of 24) -12297 NR_030775 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr4-1613 chr4 53981689 53981899 + 12.1 0.000 Intergenic Tigger4|DNA|TcMar-Tigger 5488 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr15-835 chr15 41115591 41115801 + 12.1 0.000 intron (NM_017553, intron 1 of 35) intron (NM_017553, intron 1 of 35) 550 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr6-3759 chr6 13712660 13712870 + 12.1 0.000 promoter-TSS (NM_005493) promoter-TSS (NM_005493) -930 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr9-5572 chr9 112360521 112360731 + 12.1 0.000 Intergenic Intergenic -19283 NR_036651 84263 Hs.59486 NM_032303 ENSG00000119471 HSDL2 C9orf99|SDR13C1 hydroxysteroid dehydrogenase like 2 protein-coding chr1-4381 chr1 158045759 158045969 + 12.1 0.000 intron (NM_001286349, intron 1 of 12) MER21C|LTR|ERVL 20314 NR_145471 100505785 Hs.664656 NR_145471 KIRREL1-IT1 KIRREL-IT1 KIRREL1 intronic transcript 1 ncRNA chr6-2748 chr6 109157283 109157493 + 12.1 0.000 TTS (NM_001350665) TTS (NM_001350665) -8443 NR_152435 221262 Hs.373914 NM_173671 ENSG00000203799 CCDC162P C6orf183|C6orf184|C6orf185|CCDC162 coiled-coil domain containing 162, pseudogene pseudo chr3-6798 chr3 144511313 144511523 + 12.1 0.000 Intergenic Intergenic 538337 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr20-1115 chr20 11648899 11649109 + 12.1 0.000 Intergenic Intergenic 221711 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr1-2735 chr1 19861117 19861327 + 12.1 0.000 Intergenic Intergenic -21173 NM_015207 23252 Hs.374987 NM_015207 ENSG00000169914 OTUD3 DUBA4 OTU deubiquitinase 3 protein-coding chr18-1254 chr18 55870115 55870325 + 12.1 0.000 Intergenic Intergenic 49979 NR_110755 101927273 Hs.434335 NR_110755 ENSG00000260930 LINC01416 - long intergenic non-protein coding RNA 1416 ncRNA chr5-1424 chr5 179228024 179228234 + 12.1 0.000 intron (NM_014244, intron 3 of 21) L2|LINE|L2 117332 NM_014244 9509 Hs.23871 NM_014244 ENSG00000087116 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif 2 protein-coding chr4-1075 chr4 127995841 127996051 + 12.1 0.000 intron (NM_001039717, intron 4 of 10) intron (NM_001039717, intron 4 of 10) -29983 NM_152778 256471 Hs.480701 NM_152778 ENSG00000164073 MFSD8 CCMD|CLN7 major facilitator superfamily domain containing 8 protein-coding chr15-2093 chr15 66477934 66478144 + 12.1 0.000 intron (NM_002755, intron 5 of 10) intron (NM_002755, intron 5 of 10) 18995 NR_039737 100616149 NR_039737 ENSG00000266589 MIR4512 - microRNA 4512 ncRNA chr13-752 chr13 49734105 49734315 + 12.1 0.000 intron (NM_002267, intron 2 of 16) L1M5|LINE|L1 -42723 NR_103802 84650 Hs.433278 NM_032565 ENSG00000123179 EBPL EBRP EBP like protein-coding chr1-3371 chr1 116667707 116667917 + 12.1 0.000 promoter-TSS (NM_001542) promoter-TSS (NM_001542) -57 NM_001542 3321 Hs.171057 NM_001542 ENSG00000143061 IGSF3 EWI-3|LCDD|V8 immunoglobulin superfamily member 3 protein-coding chr11-3355 chr11 121929530 121929740 + 12.1 0.000 Intergenic Intergenic 170209 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr5-1618 chr5 72760383 72760593 + 12.1 0.000 Intergenic MLT2B3|LTR|ERVL -56103 NM_002270 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chr2-3301 chr2 100281913 100282123 + 12.1 0.000 3' UTR (NM_198461, exon 12 of 12) 3' UTR (NM_198461, exon 12 of 12) 40715 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr21-299 chr21 32403333 32403543 + 12.1 0.000 Intergenic Intergenic -8285 NM_001320745 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr7-1566 chr7 73451945 73452155 + 12.1 0.000 intron (NM_001370402, intron 13 of 18) intron (NM_001370402, intron 13 of 18) 18272 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr11-2280 chr11 2170502 2170712 + 12.1 0.000 intron (NM_000360, intron 1 of 12) intron (NM_000360, intron 1 of 12) 1208 NM_199293 7054 Hs.435609 NM_000360 ENSG00000180176 TH DYT14|DYT5b|TYH tyrosine hydroxylase protein-coding chr9-2350 chr9 83473369 83473579 + 12.1 0.000 intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) -5732 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr11-9075 chr11 30259921 30260131 + 12.1 0.000 Intergenic Intergenic 29012 NM_001018080 2488 Hs.36975 NM_000510 ENSG00000131808 FSHB HH24 follicle stimulating hormone subunit beta protein-coding chr7-1318 chr7 130875242 130875452 + 12.1 0.000 Intergenic Intergenic 1463 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr8-1591 chr8 137156445 137156655 + 12.1 0.000 Intergenic L1M1|LINE|L1 257038 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr18-1280 chr18 59900812 59901022 + 12.1 0.000 intron (NM_021127, intron 1 of 1) intron (NM_021127, intron 1 of 1) 921 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr8-1100 chr8 38937202 38937412 + 12.1 0.000 intron (NM_021623, intron 3 of 11) intron (NM_021623, intron 3 of 11) 35961 NM_021623 59339 Hs.369123 NM_021623 ENSG00000169499 PLEKHA2 TAPP2 pleckstrin homology domain containing A2 protein-coding chr22-2313 chr22 38332864 38333074 + 12.1 0.000 intron (NM_001289912, intron 5 of 14) intron (NM_001289912, intron 5 of 14) -14885 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr1-3445 chr1 23791716 23791926 + 12.1 0.000 intron (NM_007260, intron 1 of 9) intron (NM_007260, intron 1 of 9) 676 NM_007260 11313 Hs.533479 NM_007260 ENSG00000011009 LYPLA2 APT-2|APT2|DJ886K2.4 lysophospholipase 2 protein-coding chr3-3420 chr3 104291931 104292141 + 12.1 0.000 Intergenic MER65-int|LTR|ERV1 -767920 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr17-2726 chr17 73333527 73333737 + 12.1 0.000 TTS (NM_001144952) TTS (NM_001144952) -21631 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr11-1588 chr11 7020266 7020476 + 12.1 0.000 promoter-TSS (NR_148988) promoter-TSS (NR_148988) -25 NM_001354833 7761 Hs.445849 NM_013249 ENSG00000149050 ZNF214 BAZ-1|BAZ1 zinc finger protein 214 protein-coding chr2-9468 chr2 235213615 235213825 + 12.1 0.000 Intergenic Intergenic 185985 NM_001371306 chrX-1180 chrX 54440129 54440339 + 12.1 0.000 promoter-TSS (NM_001346792) promoter-TSS (NM_001346792) -141 NM_001346792 90121 Hs.522662 NM_058163 ENSG00000158526 TSR2 DBA14|DT1P1A10|WGG1 TSR2 ribosome maturation factor protein-coding chr11-3271 chr11 76510691 76510901 + 12.1 0.000 intron (NM_001300942, intron 10 of 21) L1M4b|LINE|L1 65771 NM_020193 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding chr4-1667 chr4 139014960 139015170 + 12.1 0.000 promoter-TSS (NM_012118) promoter-TSS (NM_012118) -716 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr1-2992 chr1 201505577 201505787 + 12.1 0.000 intron (NM_001193570, intron 1 of 5) intron (NM_001193570, intron 1 of 5) 1157 NM_001193571 1465 Hs.108080 NM_004078 ENSG00000159176 CSRP1 CRP|CRP1|CSRP|CYRP|D1S181E|HEL-141|HEL-S-286 cysteine and glycine rich protein 1 protein-coding chr9-2962 chr9 137371890 137372100 + 12.1 0.000 intron (NM_001286823, intron 5 of 7) intron (NM_001286823, intron 5 of 7) 51167 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr3-5490 chr3 191450932 191451142 + 12.1 0.000 intron (NR_120606, intron 1 of 6) L1MA4|LINE|L1 -10126 NM_001083308 152138 Hs.690618 NM_001083308 ENSG00000253548 PYDC2 POP2|cPOP2 pyrin domain containing 2 protein-coding chr14-1303 chr14 34650808 34651018 + 12.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -20765 NM_152233 58533 Hs.276523 NM_021249 ENSG00000129515 SNX6 MSTP010|TFAF2 sorting nexin 6 protein-coding chr6-2526 chr6 3945534 3945744 + 12.1 0.000 Intergenic AluSx|SINE|Alu -75661 NR_146784 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr15-743 chr15 36219424 36219634 + 12.1 0.000 Intergenic Intergenic 292673 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr15-4245 chr15 33446813 33447023 + 12.1 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 135951 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr5-2105 chr5 50666389 50666599 + 12.1 0.000 promoter-TSS (NM_001331028) promoter-TSS (NM_001331028) -143 NM_001178056 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr1-1457 chr1 14924032 14924242 + 12.1 0.000 promoter-TSS (NM_001018000) promoter-TSS (NM_001018000) 8 NM_001370229 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr1-1756 chr1 241356650 241356860 + 12.1 0.000 promoter-TSS (NM_001350116) promoter-TSS (NM_001350116) 450 NM_001364886 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr10-2584 chr10 72616861 72617071 + 12.1 0.000 intron (NM_006077, intron 1 of 11) L1MEc|LINE|L1 9113 NM_001195518 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr6-1872 chr6 73236195 73236405 + 12.1 0.000 Intergenic MER58B|DNA|hAT-Charlie -10804 NM_001126063 100129128 Hs.663639 NM_001126063 ENSG00000256980 KHDC1L - KH domain containing 1 like protein-coding chr20-1843 chr20 8757329 8757539 + 12.1 0.000 intron (NM_182734, intron 24 of 32) intron (NM_182734, intron 24 of 32) -73751 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr22-1412 chr22 41377556 41377766 + 12.1 0.000 intron (NM_001145398, intron 1 of 3) intron (NM_001145398, intron 1 of 3) -4281 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr11-6346 chr11 63443736 63443946 + 12.1 0.000 Intergenic MLT1F1-int|LTR|ERVL-MaLR 47326 NM_001146729 117245 Hs.410316 NM_054108 ENSG00000168004 PLAAT5 HRASLS5|HRLP5|HRSL5|PLAAT-5|RLP1|iNAT phospholipase A and acyltransferase 5 protein-coding chr7-7005 chr7 123674851 123675061 + 12.1 0.000 Intergenic Intergenic 19090 NM_207163 442721 Hs.592260 NM_207163 ENSG00000170807 LMOD2 C-LMOD|CLMOD leiomodin 2 protein-coding chr7-2272 chr7 6101212 6101422 + 12.1 0.000 Intergenic Intergenic -3632 NM_032172 84132 Hs.31856 NM_032172 ENSG00000106346 USP42 - ubiquitin specific peptidase 42 protein-coding chr17-1488 chr17 8163251 8163461 + 12.1 0.000 promoter-TSS (NM_001330125) promoter-TSS (NM_001330125) -408 NM_014232 6844 Hs.25348 NM_014232 ENSG00000220205 VAMP2 SYB2|VAMP-2 vesicle associated membrane protein 2 protein-coding chr19-1234 chr19 34482377 34482587 + 12.1 0.000 exon (NM_001080436, exon 1 of 8) exon (NM_001080436, exon 1 of 8) 724 NM_001080436 126374 Hs.585010 NM_001080436 ENSG00000142279 WTIP - WT1 interacting protein protein-coding chr3-4087 chr3 102355043 102355253 + 12.1 0.000 Intergenic ERVL-E-int|LTR|ERVL -79867 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr2-4391 chr2 58390470 58390680 + 12.1 0.000 Intergenic MLT2F|LTR|ERVL 114698 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA chr14-1228 chr14 95322950 95323160 + 12.1 0.000 Intergenic L3|LINE|CR1 -3147 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr8-4023 chr8 58830452 58830662 + 12.1 0.000 intron (NM_014729, intron 5 of 8) intron (NM_014729, intron 5 of 8) -170704 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr11-1568 chr11 95338687 95338897 + 12.1 0.000 Intergenic Intergenic -106317 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr2-11944 chr2 25886009 25886219 + 12.1 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -7627 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr1-4636 chr1 175811988 175812198 + 12.1 0.000 Intergenic L1PA13|LINE|L1 -65250 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr18-1393 chr18 58603952 58604162 + 12.1 0.000 intron (NM_052947, intron 3 of 12) intron (NM_052947, intron 3 of 12) 3437 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr8-2190 chr8 126729486 126729696 + 12.1 0.000 Intergenic Intergenic -171113 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr22-912 chr22 31343843 31344053 + 12.1 0.000 intron (NM_032050, intron 1 of 3) intron (NM_032050, intron 1 of 3) 2398 NM_032052 23598 Hs.731398 NM_014323 ENSG00000100105 PATZ1 MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23 POZ/BTB and AT hook containing zinc finger 1 protein-coding chr3-2106 chr3 46992256 46992466 + 12.1 0.000 intron (NM_001365116, intron 9 of 52) intron (NM_001365116, intron 9 of 52) 4371 NM_001365116 23218 Hs.437043 NM_015175 ENSG00000160796 NBEAL2 BDPLT4|GPS neurobeachin like 2 protein-coding chr4-4266 chr4 22689212 22689422 + 12.1 0.000 Intergenic MSTA|LTR|ERVL-MaLR -3597 NM_020973 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr8-1524 chr8 86865135 86865345 + 12.1 0.000 Intergenic LTR1B0|LTR|ERV1 -1175 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr7-2642 chr7 2211781 2211991 + 12.1 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) 21059 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr8-958 chr8 90645844 90646054 + 12.1 0.000 promoter-TSS (NM_001146273) promoter-TSS (NM_001146273) -44 NM_001146273 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr12-6786 chr12 9651390 9651600 + 12.1 0.000 intron (NR_046444, intron 1 of 4) MSTA|LTR|ERVL-MaLR 3448 NR_046446 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2 member D pseudogene pseudo chr18-468 chr18 44917414 44917624 + 12.1 0.000 intron (NM_015559, intron 3 of 5) intron (NM_015559, intron 3 of 5) 52647 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr12-2548 chr12 107581423 107581633 + 12.1 0.000 intron (NM_001018072, intron 4 of 16) CpG-5930 654 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr18-2987 chr18 23972478 23972688 + 12.1 0.000 Intergenic L2a|LINE|L2 -20304 NM_153211 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr3-1704 chr3 47612085 47612295 + 12.1 0.000 intron (NM_003074, intron 25 of 27) intron (NM_003074, intron 25 of 27) -31950 NM_001206945 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr8-3031 chr8 132063368 132063578 + 12.1 0.000 3' UTR (NM_001145095, exon 16 of 16) 3' UTR (NM_001145095, exon 16 of 16) -4091 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr22-1307 chr22 44732758 44732968 + 12.1 0.000 intron (NM_181333, intron 6 of 7) (CA)n|Simple_repeat|Simple_repeat -19695 NM_001017526 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr20-977 chr20 47392072 47392282 + 12.1 0.000 intron (NR_146496, intron 2 of 2) MLT1J|LTR|ERVL-MaLR 19217 NR_146495 102723442 NR_146494 LINC01754 - long intergenic non-protein coding RNA 1754 ncRNA chr5-6083 chr5 11124409 11124619 + 12.1 0.000 intron (NM_001288715, intron 11 of 20) intron (NM_001288715, intron 11 of 20) -363280 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr11-1330 chr11 123654077 123654287 + 12.1 0.000 5' UTR (NM_018400, exon 1 of 6) 5' UTR (NM_018400, exon 1 of 6) 425 NM_001040151 55800 Hs.4865 NM_018400 ENSG00000166257 SCN3B ATFB16|BRGDA7|HSA243396|SCNB3 sodium voltage-gated channel beta subunit 3 protein-coding chr11-853 chr11 35944141 35944351 + 12.1 0.000 intron (NM_001304264, intron 1 of 5) CpG 184 NM_174902 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr9-4048 chr9 99253144 99253354 + 12.1 0.000 Intergenic MSTA|LTR|ERVL-MaLR 30967 NM_006808 10952 Hs.191887 NM_006808 ENSG00000106803 SEC61B - SEC61 translocon beta subunit protein-coding chr9-3791 chr9 127509014 127509224 + 12.1 0.000 exon (NM_001035534, exon 10 of 14) exon (NM_001035534, exon 10 of 14) 56864 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr10-2760 chr10 122469021 122469231 + 12.1 0.000 intron (NM_002775, intron 1 of 8) intron (NM_002775, intron 1 of 8) 7573 NM_002775 5654 Hs.501280 NM_002775 ENSG00000166033 HTRA1 ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11 HtrA serine peptidase 1 protein-coding chr5-6220 chr5 76801426 76801636 + 12.1 0.000 Intergenic L2a|LINE|L2 -17499 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr7-2328 chr7 127997312 127997522 + 12.1 0.000 promoter-TSS (NR_027330) promoter-TSS (NR_027330) -92 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr9-2039 chr9 1232145 1232355 + 12.1 0.000 Intergenic Intergenic 180763 NR_163472 10655 Hs.59506 NM_006557 ENSG00000173253 DMRT2 - doublesex and mab-3 related transcription factor 2 protein-coding chr16-1125 chr16 31487742 31487952 + 12.1 0.000 intron (NM_003041, intron 7 of 13) CpG-9581 4724 NR_130783 6524 Hs.709195 NM_003041 ENSG00000140675 SLC5A2 SGLT2 solute carrier family 5 member 2 protein-coding chr17-2224 chr17 82901157 82901367 + 12.1 0.000 intron (NM_005993, intron 18 of 38) intron (NM_005993, intron 18 of 38) -61240 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr15-1323 chr15 81112072 81112282 + 12.1 0.000 Intergenic Intergenic -22093 NM_173528 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr1-4272 chr1 6464294 6464504 + 12.1 0.000 exon (NM_003790, exon 5 of 10) exon (NM_003790, exon 5 of 10) 1796 NM_148965 8718 Hs.462529 NM_003790 ENSG00000215788 TNFRSF25 APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR TNF receptor superfamily member 25 protein-coding chr5-1772 chr5 30439040 30439250 + 12.1 0.000 Intergenic L1MA3|LINE|L1 558585 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chr8-4580 chr8 128999023 128999233 + 12.1 0.000 Intergenic MER44D|DNA|TcMar-Tigger -33127 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA chr1-5810 chr1 204380152 204380362 + 12.1 0.000 Intergenic Intergenic -10538 NR_027022 127841 Hs.213144 NR_027022 ENSG00000280924 LINC00628 - long intergenic non-protein coding RNA 628 ncRNA chr7-2068 chr7 139109233 139109443 + 12.1 0.000 5' UTR (NM_024625, exon 1 of 9) 5' UTR (NM_024625, exon 1 of 9) 382 NM_001363491 56829 Hs.133512 NM_020119 ENSG00000105939 ZC3HAV1 ARTD13|FLB6421|PARP13|ZAP|ZC3H2|ZC3HDC2 zinc finger CCCH-type containing, antiviral 1 protein-coding chr10-1919 chr10 133318624 133318834 + 12.1 0.000 Intergenic CpG -6392 NR_046330 10844 Hs.523370 NM_006659 ENSG00000130640 TUBGCP2 ALP4|GCP-2|GCP2|Grip103|SPBC97|SPC97|Spc97p|h103p|hGCP2|hSpc97 tubulin gamma complex associated protein 2 protein-coding chr14-1066 chr14 91482505 91482715 + 12.1 0.000 intron (NR_158976, intron 4 of 16) intron (NR_158976, intron 4 of 16) 27094 NM_001366432 55671 Hs.533887 NM_017936 ENSG00000100796 PPP4R3A FLFL1|KIAA2010|MSTP033|PP4R3|PP4R3A|SMEK1|smk-1|smk1 protein phosphatase 4 regulatory subunit 3A protein-coding chr18-657 chr18 46149752 46149962 + 12.1 0.000 Intergenic AluJb|SINE|Alu -24165 NM_001008239 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr14-1092 chr14 53152563 53152773 + 12.1 0.000 promoter-TSS (NR_110062) promoter-TSS (NR_110062) 655 NM_001160147 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding chr6-1200 chr6 16849690 16849900 + 12.1 0.000 Intergenic Intergenic -88305 NM_001128164 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr11-3768 chr11 48138335 48138545 + 12.1 0.000 intron (NM_002843, intron 10 of 24) intron (NM_002843, intron 10 of 24) 41658 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr12-1026 chr12 50075294 50075504 + 12.1 0.000 intron (NM_001256830, intron 1 of 9) intron (NM_001256830, intron 1 of 9) 1814 NM_001256830 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr17-2859 chr17 29461940 29462150 + 12.1 0.000 intron (NM_025142, intron 2 of 17) intron (NM_025142, intron 2 of 17) 71120 NM_020791 57551 Hs.597434 NM_020791 ENSG00000160551 TAOK1 KFC-B|MAP3K16|MARKK|PSK-2|PSK2|TAO1|hKFC-B|hTAOK1 TAO kinase 1 protein-coding chr3-3027 chr3 113194750 113194960 + 12.1 0.000 Intergenic Intergenic -16702 NM_033254 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr10-1748 chr10 5685723 5685933 + 12.1 0.000 non-coding (NR_135800, exon 2 of 2) non-coding (NR_135800, exon 2 of 2) 990 NR_135800 54906 Hs.610717 NM_017782 ENSG00000108021 TASOR2 C10orf18|FAM208B|bA318E3.2 transcription activation suppressor family member 2 protein-coding chr19-1649 chr19 16286520 16286730 + 12.1 0.000 Intergenic Intergenic -38201 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr3-1975 chr3 128802318 128802528 + 12.1 0.000 intron (NM_004637, intron 3 of 5) intron (NM_004637, intron 3 of 5) -44385 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr22-943 chr22 50118808 50119018 + 12.1 0.000 intron (NM_018995, intron 9 of 26) LTR45C|LTR|ERV1 -28142 NM_001164106 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chr15-1181 chr15 36357492 36357702 + 12.1 0.000 Intergenic Intergenic -222029 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr4-1521 chr4 104904152 104904362 + 12.1 0.000 Intergenic L2a|LINE|L2 -241618 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr22-1137 chr22 43789672 43789882 + 12.1 0.000 intron (NM_022785, intron 2 of 31) intron (NM_022785, intron 2 of 31) 22528 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr19-2740 chr19 38448612 38448822 + 12.1 0.000 exon (NM_000540, exon 11 of 106) exon (NM_000540, exon 11 of 106) 15017 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr3-1249 chr3 156301480 156301690 + 12.1 0.000 intron (NM_172159, intron 1 of 13) intron (NM_172159, intron 1 of 13) 10548 NM_001308222 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr11-2582 chr11 120547925 120548135 + 12.1 0.000 intron (NM_014619, intron 1 of 20) intron (NM_014619, intron 1 of 20) -16406 NM_001282470 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr13-1892 chr13 42603047 42603257 + 12.1 0.000 intron (NM_003701, intron 4 of 4) intron (NM_003701, intron 4 of 4) 29000 NM_003701 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr5-1152 chr5 160370486 160370696 + 12.1 0.000 promoter-TSS (NM_031908) promoter-TSS (NM_031908) 35 NM_031908 114898 Hs.110062 NM_031908 ENSG00000145861 C1QTNF2 CTRP2|zacrp2 C1q and TNF related 2 protein-coding chr13-911 chr13 50992001 50992211 + 12.1 0.000 Intergenic Intergenic 74051 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr1-5234 chr1 201098106 201098316 + 12.1 0.000 intron (NM_000069, intron 2 of 43) intron (NM_000069, intron 2 of 43) 14215 NM_000069 779 Hs.1294 NM_000069 ENSG00000081248 CACNA1S CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP calcium voltage-gated channel subunit alpha1 S protein-coding chr10-1841 chr10 43253008 43253218 + 12.1 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) 13952 NM_145313 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr5-1985 chr5 154288213 154288423 + 12.1 0.000 intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) -58788 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr2-4866 chr2 105437716 105437926 + 12.1 0.000 intron (NM_201557, intron 1 of 5) intron (NM_201557, intron 1 of 5) 692 NM_201557 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr4-5232 chr4 168884694 168884904 + 12.1 0.000 intron (NM_001166110, intron 2 of 11) intron (NM_001166110, intron 2 of 11) 52704 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr14-3534 chr14 104083240 104083450 + 12.1 0.000 Intergenic Intergenic -2355 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr15-4556 chr15 57462437 57462647 + 12.1 0.000 intron (NM_032866, intron 8 of 18) intron (NM_032866, intron 8 of 18) 86037 NM_001252335 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr12-1952 chr12 110826664 110826874 + 12.1 0.000 Intergenic Intergenic -20218 NM_001286244 160762 Hs.437141 NM_152591 ENSG00000173093 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding chr10-1067 chr10 119371131 119371341 + 12.1 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -6736 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr6-1406 chr6 132707201 132707411 + 12.1 0.000 intron (NM_004666, intron 2 of 6) L1MA2|LINE|L1 6749 NM_004666 8876 Hs.12114 NM_004666 ENSG00000112299 VNN1 HDLCQ8|Tiff66 vanin 1 protein-coding chr9-931 chr9 21994613 21994823 + 12.1 0.000 promoter-TSS (NM_058195) promoter-TSS (NM_058195) -73 NR_120536 100048912 Hs.493614 NR_003529 ENSG00000240498 CDKN2B-AS1 ANRIL|CDKN2B-AS|CDKN2BAS|NCRNA00089|PCAT12|p15AS CDKN2B antisense RNA 1 ncRNA chr7-2238 chr7 137687816 137688026 + 12.1 0.000 intron (NM_001321710, intron 2 of 32) intron (NM_001321710, intron 2 of 32) 158411 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr15-735 chr15 77992103 77992313 + 12.1 0.000 Intergenic Intergenic 2017 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr6-1962 chr6 138404534 138404744 + 12.1 0.000 intron (NM_014320, intron 1 of 3) CpG 416 NM_014320 23593 Hs.486589 NM_014320 ENSG00000051620 HEBP2 C6ORF34B|C6orf34|PP23|SOUL heme binding protein 2 protein-coding chr9-2112 chr9 93260620 93260830 + 12.1 0.000 intron (NM_006648, intron 11 of 28) intron (NM_006648, intron 11 of 28) 75795 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chrX-601 chrX 129996000 129996210 + 12.1 0.000 Intergenic Intergenic -9083 NM_001184772 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr9-3690 chr9 104764080 104764290 + 12.1 0.000 promoter-TSS (NM_018376) promoter-TSS (NM_018376) 56 NR_130760 55335 Hs.429294 NM_018376 ENSG00000165028 NIPSNAP3B FP944|NIPSNAP3|SNAP1 nipsnap homolog 3B protein-coding chr20-1091 chr20 62489655 62489865 + 12.1 0.000 Intergenic Intergenic -13765 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr5-2985 chr5 222949 223159 + 12.1 0.000 intron (NM_001294332, intron 1 of 13) intron (NM_001294332, intron 1 of 13) 4734 NM_004168 6389 Hs.440475 NM_004168 ENSG00000073578 SDHA CMD1GG|FP|PGL5|SDH1|SDH2|SDHF succinate dehydrogenase complex flavoprotein subunit A protein-coding chr9-4651 chr9 114701353 114701563 + 12.1 0.000 Intergenic Intergenic -19369 NR_144867 100505478 Hs.200101 NM_001199233 ENSG00000230601 TEX48 - testis expressed 48 protein-coding chr3-4357 chr3 185152532 185152742 + 12.1 0.000 exon (NM_001025266, exon 1 of 2) exon (NM_001025266, exon 1 of 2) 423 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr8-2808 chr8 124321307 124321517 + 12.1 0.000 intron (NM_194291, intron 5 of 6) intron (NM_194291, intron 5 of 6) 51287 NM_194291 157378 Hs.100691 NM_194291 ENSG00000164983 TMEM65 - transmembrane protein 65 protein-coding chr10-4405 chr10 59574358 59574568 + 12.1 0.000 Intergenic L1MEc|LINE|L1 135428 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr7-5241 chr7 16990081 16990291 + 12.1 0.000 Intergenic Intergenic -108203 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr12-1912 chr12 80703046 80703256 + 12.1 0.000 Intergenic Intergenic -4483 NM_002469 4618 Hs.35937 NM_002469 ENSG00000111046 MYF6 CNM3|MRF4|bHLHc4|myf-6 myogenic factor 6 protein-coding chr20-403 chr20 58047068 58047278 + 12.1 0.000 Intergenic Intergenic 43269 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr6-1444 chr6 158648705 158648915 + 12.1 0.000 Intergenic Intergenic -1204 NM_001242394 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr9-2738 chr9 95168078 95168288 + 12.1 0.000 intron (NM_001243744, intron 6 of 13) intron (NM_001243744, intron 6 of 13) -82089 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr16-1563 chr16 84992858 84993068 + 12.1 0.000 intron (NM_001145548, intron 2 of 8) intron (NM_001145548, intron 2 of 8) 18572 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr1-7839 chr1 71185556 71185766 + 12.1 0.000 intron (NR_046217, intron 2 of 3) intron (NR_046217, intron 2 of 3) 104337 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr12-2019 chr12 43156722 43156932 + 12.1 0.000 intron (NR_146866, intron 1 of 3) intron (NR_146866, intron 1 of 3) 1512 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr21-459 chr21 33314200 33314410 + 12.1 0.000 Intergenic MER76|LTR|ERVL -10665 NM_000629 3454 Hs.529400 NM_000629 ENSG00000142166 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon alpha and beta receptor subunit 1 protein-coding chr22-2433 chr22 19712019 19712229 + 12.1 0.000 Intergenic Intergenic -2379 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding chr18-1520 chr18 7761411 7761621 + 12.1 0.000 intron (NM_002845, intron 1 of 30) intron (NM_002845, intron 1 of 30) 194200 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr5-3936 chr5 20840 21050 + 12.1 0.000 Intergenic Intergenic -71223 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr4-1705 chr4 172683059 172683269 + 12.1 0.000 intron (NR_125894, intron 1 of 2) intron (NR_125894, intron 1 of 2) 5753 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr8-2168 chr8 90830695 90830905 + 12.1 0.000 intron (NM_022351, intron 3 of 12) intron (NM_022351, intron 3 of 12) 39025 NM_022351 64168 Hs.719466 NM_022351 ENSG00000123119 NECAB1 EFCBP1|STIP-1 N-terminal EF-hand calcium binding protein 1 protein-coding chr2-3556 chr2 26363460 26363670 + 12.1 0.000 intron (NR_137633, intron 1 of 9) intron (NR_137633, intron 1 of 9) -16776 NM_001321971 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr5-5681 chr5 160551372 160551582 + 12.1 0.000 Intergenic Intergenic 66125 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr11-4171 chr11 57313465 57313675 + 12.1 0.000 exon (NM_033396, exon 5 of 12) exon (NM_033396, exon 5 of 12) 11382 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr12-1136 chr12 95384029 95384239 + 12.1 0.000 Intergenic LTR3B_|LTR|ERVK 74211 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr8-3795 chr8 26751959 26752169 + 12.1 0.000 intron (NM_001322503, intron 1 of 1) MER63A|DNA|hAT-Blackjack 113591 NR_136343 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr10-2130 chr10 16521001 16521211 + 12.1 0.000 5' UTR (NM_001010908, exon 1 of 2) 5' UTR (NM_001010908, exon 1 of 2) 773 NM_001010908 389941 Hs.676792 NM_001010908 ENSG00000165985 C1QL3 C1QTNF13|C1ql|CTRP13|K100 complement C1q like 3 protein-coding chr1-7014 chr1 170068656 170068866 + 12.1 0.000 5' UTR (NM_001204517, exon 1 of 20) 5' UTR (NM_001204517, exon 1 of 20) 154 NM_001204517 22920 Hs.433442 NM_014970 ENSG00000075945 KIFAP3 FLA3|KAP-1|KAP-3|KAP3|SMAP|Smg-GDS|dJ190I16.1 kinesin associated protein 3 protein-coding chr4-1089 chr4 153409588 153409798 + 12.1 0.000 intron (NM_032117, intron 7 of 7) intron (NM_032117, intron 7 of 7) -56653 NM_015196 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr13-1681 chr13 76725797 76726007 + 12.1 0.000 Intergenic L2b|LINE|L2 160503 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr21-817 chr21 36212033 36212243 + 12.1 0.000 intron (NM_005128, intron 7 of 36) intron (NM_005128, intron 7 of 36) 47597 NM_005128 9980 Hs.204575 NM_005128 ENSG00000142197 DOP1B 21orf5|C21orf5|DOPEY2 DOP1 leucine zipper like protein B protein-coding chr3-3019 chr3 110027381 110027591 + 12.1 0.000 Intergenic Intergenic 424658 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr1-7591 chr1 229025204 229025414 + 12.1 0.000 Intergenic Intergenic 149492 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr10-2479 chr10 29329103 29329313 + 12.1 0.000 Intergenic Intergenic 40138 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr5-3468 chr5 169745523 169745733 + 12.1 0.000 intron (NR_156756, intron 22 of 52) MIR|SINE|MIR 108353 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr12-4966 chr12 75505779 75505989 + 12.1 0.000 intron (NM_007043, intron 5 of 9) intron (NM_007043, intron 5 of 9) 5725 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr5-4225 chr5 128834335 128834545 + 12.1 0.000 Intergenic Intergenic -130687 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr9-2359 chr9 101832793 101833003 + 12.1 0.000 Intergenic Intergenic -94318 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr6-4933 chr6 99796783 99796993 + 12.1 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 190114 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr5-3217 chr5 89105355 89105565 + 12.1 0.000 intron (NR_136221, intron 4 of 6) ERVL-B4-int|LTR|ERVL -201355 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr10-3144 chr10 68543112 68543322 + 12.1 0.000 Intergenic ERVL47-int|LTR|ERVL -15694 NM_001324314 8034 Hs.180408 NM_152707 ENSG00000122912 SLC25A16 D10S105E|GDA|GDC|HGT.1|ML7|hML7 solute carrier family 25 member 16 protein-coding chr14-2200 chr14 100854458 100854668 + 12.1 0.000 TTS (NR_046473) TTS (NR_046473) 2173 NR_030528 768222 NR_030528 ENSG00000211574 MIR770 MIRN770|hsa-mir-770 microRNA 770 ncRNA chr9-2514 chr9 112377650 112377860 + 12.1 0.000 Intergenic Intergenic -2154 NR_036651 84263 Hs.59486 NM_032303 ENSG00000119471 HSDL2 C9orf99|SDR13C1 hydroxysteroid dehydrogenase like 2 protein-coding chr11-2588 chr11 123308118 123308328 + 12.1 0.000 Intergenic Intergenic -50199 NM_001367419 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr13-1010 chr13 23378115 23378325 + 12.1 0.000 intron (NM_014363, intron 2 of 9) intron (NM_014363, intron 2 of 9) -2712 NM_001278055 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr10-2845 chr10 46315530 46315740 + 12.1 0.000 intron (NM_001278688, intron 16 of 16) intron (NM_001278688, intron 16 of 16) 28638 NM_001354208 195977 Hs.538515 NM_001278688 ENSG00000274209 ANTXRL - ANTXR like protein-coding chrX-947 chrX 65697246 65697456 + 12.1 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 29697 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr13-1582 chr13 38452844 38453054 + 12.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 103098 NM_001286705 51569 Hs.643655 NM_016617 ENSG00000120686 UFM1 BM-002|C13orf20|HLD14 ubiquitin fold modifier 1 protein-coding chr10-2683 chr10 99977073 99977283 + 12.1 0.000 intron (NM_015221, intron 1 of 16) intron (NM_015221, intron 1 of 16) 32769 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr8-2019 chr8 102129505 102129715 + 12.1 0.000 Intergenic L1ME1|LINE|L1 4178 NR_049859 100847001 NR_049859 ENSG00000266756 MIR5680 - microRNA 5680 ncRNA chrX-398 chrX 23405422 23405632 + 12.1 0.000 Intergenic Intergenic 70678 NM_173495 139411 Hs.319503 NM_173495 ENSG00000165186 PTCHD1 AUTSX4 patched domain containing 1 protein-coding chr1-2585 chr1 43310128 43310338 + 12.1 0.000 intron (NM_001253357, intron 9 of 22) intron (NM_001253357, intron 9 of 22) 9251 NM_005424 7075 Hs.78824 NM_005424 ENSG00000066056 TIE1 JTK14|TIE tyrosine kinase with immunoglobulin like and EGF like domains 1 protein-coding chr12-2462 chr12 57147732 57147942 + 12.1 0.000 promoter-TSS (NR_131938) promoter-TSS (NR_131938) -218 NR_131939 105751187 Hs.609540 NR_131938 ENSG00000259125 LRP1-AS - LRP1 antisense RNA ncRNA chr1-4466 chr1 9044914 9045124 + 12.1 0.000 intron (NM_001328621, intron 1 of 8) Charlie1b|DNA|hAT-Charlie -18674 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr9-2508 chr9 108467959 108468169 + 12.1 0.000 Intergenic Intergenic 387922 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr15-3509 chr15 99386390 99386600 + 12.1 0.000 non-coding (NR_135756, exon 9 of 9) non-coding (NR_135756, exon 9 of 9) 128970 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr1-5420 chr1 22783672 22783882 + 12.1 0.000 intron (NM_004442, intron 2 of 15) intron (NM_004442, intron 2 of 15) 64260 NR_039832 100616391 NR_039832 ENSG00000265422 MIR4684 - microRNA 4684 ncRNA chr17-5821 chr17 65020381 65020591 + 12.1 0.000 intron (NM_006572, intron 2 of 3) intron (NM_006572, intron 2 of 3) 35288 NM_001282425 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr1-5030 chr1 84854421 84854631 + 12.1 0.000 intron (NM_012152, intron 2 of 2) intron (NM_012152, intron 2 of 2) 38680 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding chr4-2234 chr4 148195907 148196117 + 12.1 0.000 intron (NM_000901, intron 3 of 8) L2a|LINE|L2 246402 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr22-930 chr22 38353289 38353499 + 12.1 0.000 intron (NR_002821, intron 4 of 4) intron (NR_002821, intron 4 of 4) -35310 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr3-3061 chr3 128112391 128112601 + 12.1 0.000 intron (NM_003707, intron 3 of 10) intron (NM_003707, intron 3 of 10) 11316 NM_001319084 8607 Hs.272822 NM_003707 ENSG00000175792 RUVBL1 ECP-54|ECP54|INO80H|NMP 238|NMP238|PONTIN|Pontin52|RVB1|TIH1|TIP49|TIP49A RuvB like AAA ATPase 1 protein-coding chr22-1269 chr22 29912856 29913066 + 12.1 0.000 intron (NM_153051, intron 1 of 18) intron (NM_153051, intron 1 of 18) 29787 NM_153051 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding chr3-3118 chr3 149377659 149377869 + 12.1 0.000 promoter-TSS (NM_014220) promoter-TSS (NM_014220) -14 NR_046650 100874091 Hs.549633 NR_046650 ENSG00000240541 TM4SF1-AS1 - TM4SF1 antisense RNA 1 ncRNA chrX-478 chrX 56563362 56563572 + 12.1 0.000 promoter-TSS (NM_013444) promoter-TSS (NM_013444) -126 NM_013444 29978 Hs.179309 NM_013444 ENSG00000188021 UBQLN2 ALS15|CHAP1|DSK2|HRIHFB2157|N4BP4|PLIC2 ubiquilin 2 protein-coding chr16-1716 chr16 28864191 28864401 + 12.1 0.000 5' UTR (NM_015503, exon 1 of 9) 5' UTR (NM_015503, exon 1 of 9) 303 NM_015503 25970 Hs.15744 NM_015503 ENSG00000178188 SH2B1 PSM|SH2B SH2B adaptor protein 1 protein-coding chr3-6969 chr3 165009476 165009686 + 12.1 0.000 intron (NM_001041, intron 34 of 47) intron (NM_001041, intron 34 of 47) 68915 NM_001041 6476 Hs.429596 NM_001041 ENSG00000090402 SI - sucrase-isomaltase protein-coding chr22-1055 chr22 46641958 46642168 + 12.1 0.000 intron (NM_015124, intron 3 of 18) L1MC5|LINE|L1 21677 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr8-2137 chr8 17051354 17051564 + 12.1 0.000 intron (NR_146233, intron 1 of 15) L2a|LINE|L2 24221 NM_181723 286097 Hs.403594 NM_181723 ENSG00000155970 MICU3 EFHA2 mitochondrial calcium uptake family member 3 protein-coding chr15-1101 chr15 71572524 71572734 + 12.1 0.000 intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 25393 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr20-4353 chr20 55525963 55526173 + 12.1 0.000 Intergenic L1PA16|LINE|L1 -98871 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA chr4-3048 chr4 139662189 139662399 + 12.1 0.000 Intergenic MSTD|LTR|ERVL-MaLR -3474 NM_001204367 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr14-994 chr14 99758490 99758700 + 12.1 0.000 Intergenic Intergenic -34818 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr13-951 chr13 102091385 102091595 + 12.1 0.000 intron (NM_175929, intron 1 of 4) LTR50|LTR|ERVL -45486 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr3-2059 chr3 158725311 158725521 + 12.1 0.000 intron (NM_206963, intron 1 of 5) intron (NM_206963, intron 1 of 5) 7041 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr10-1241 chr10 80493741 80493951 + 12.1 0.000 intron (NM_001128309, intron 2 of 5) intron (NM_001128309, intron 2 of 5) 25583 NM_001351271 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr5-5777 chr5 173973381 173973591 + 12.1 0.000 Intergenic Intergenic -15684 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chr3-6710 chr3 134387295 134387505 + 12.1 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -11983 NM_001278683 51421 Hs.426312 NM_016201 ENSG00000114019 AMOTL2 LCCP angiomotin like 2 protein-coding chr4-774 chr4 88593166 88593376 + 12.1 0.000 intron (NM_001271602, intron 1 of 24) CpG 791 NM_001318505 8916 Hs.35804 NM_014606 ENSG00000138641 HERC3 - HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein-coding chr10-4750 chr10 2904674 2904884 + 12.1 0.000 Intergenic Intergenic 162154 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr6-1529 chr6 42017290 42017500 + 12.1 0.000 intron (NM_001136017, intron 1 of 4) intron (NM_001136017, intron 1 of 4) 31499 NM_001136126 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr6-2495 chr6 106752178 106752388 + 12.1 0.000 intron (NR_147987, intron 1 of 2) intron (NR_147987, intron 1 of 2) -31842 NR_030314 693172 NR_030314 ENSG00000207577 MIR587 MIRN587|hsa-mir-587 microRNA 587 ncRNA chr2-4456 chr2 217371826 217372036 + 12.1 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 89198 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2-2093 chr2 235506497 235506707 + 12.1 0.000 intron (NR_131900, intron 1 of 1) intron (NR_131900, intron 1 of 1) 851 NR_131900 100506749 Hs.684184 NR_131900 ENSG00000235529 AGAP1-IT1 - AGAP1 intronic transcript 1 ncRNA chr5-2580 chr5 65742599 65742809 + 12.1 0.000 intron (NM_020726, intron 1 of 12) intron (NM_020726, intron 1 of 12) 20499 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chr16-3588 chr16 71946278 71946488 + 12.1 0.000 intron (NM_181536, intron 22 of 29) L1ME3C|LINE|L1 50852 NM_014761 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr2-6943 chr2 113196927 113197137 + 12.1 0.000 intron (NM_012455, intron 12 of 16) intron (NM_012455, intron 12 of 16) 23061 NM_012455 23550 Hs.516306 NM_012455 ENSG00000125637 PSD4 EFA6B|TIC pleckstrin and Sec7 domain containing 4 protein-coding chr3-2947 chr3 58158192 58158402 + 12.1 0.000 intron (NM_001164318, intron 41 of 45) MER3|DNA|hAT-Charlie 12338 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr5-1165 chr5 492713 492923 + 12.1 0.000 intron (NM_001284351, intron 1 of 16) intron (NM_001284351, intron 1 of 16) 19582 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr22-2069 chr22 49800817 49801027 + 12.1 0.000 intron (NM_001349942, intron 3 of 12) intron (NM_001349942, intron 3 of 12) 23409 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr3-5469 chr3 185318393 185318603 + 12.1 0.000 intron (NM_001242317, intron 2 of 12) intron (NM_001242317, intron 2 of 12) 35537 NM_001242317 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr22-1019 chr22 28711991 28712201 + 12.1 0.000 intron (NM_001349956, intron 4 of 13) intron (NM_001349956, intron 4 of 13) 29724 NM_001005735 11200 Hs.291363 NM_007194 ENSG00000183765 CHEK2 CDS1|CHK2|HuCds1|LFS2|PP1425|RAD53|hCds1 checkpoint kinase 2 protein-coding chr8-3685 chr8 17465322 17465532 + 12.1 0.000 Intergenic MER121|DNA|hAT? -31661 NM_001370338 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr3-8424 chr3 110815096 110815306 + 12.1 0.000 Intergenic L2|LINE|L2 254758 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr3-4369 chr3 186037903 186038113 + 12.1 0.000 Intergenic MER77|LTR|ERVL 71081 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr14-2175 chr14 95363813 95364023 + 12.1 0.000 Intergenic Intergenic 34334 NR_110127 101929080 Hs.525567 NR_110127 ENSG00000258630 LINC02292 - long intergenic non-protein coding RNA 2292 ncRNA chr4-1729 chr4 1811220 1811430 + 12.1 0.000 TTS (NM_012318) TTS (NM_012318) 18013 NM_001163213 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr2-2234 chr2 201806576 201806786 + 12.1 0.000 exon (NM_001261436, exon 1 of 13) exon (NM_001261436, exon 1 of 13) 102 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr17-1662 chr17 72592634 72592844 + 12.1 0.000 promoter-TSS (NR_152516) promoter-TSS (NR_152516) 65 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr7-1627 chr7 22731129 22731339 + 12.1 0.000 intron (NM_000600, intron 4 of 4) AluSz6|SINE|Alu -3614 NR_131935 541472 Hs.512234 NR_131935 ENSG00000179428 LOC541472 - uncharacterized LOC541472 ncRNA chr2-9094 chr2 204249163 204249373 + 12.1 0.000 Intergenic Intergenic -296207 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr13-1303 chr13 80592649 80592859 + 12.1 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -251628 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr2-5012 chr2 224886088 224886298 + 12.1 0.000 intron (NM_001290263, intron 5 of 55) intron (NM_001290263, intron 5 of 55) 60856 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr15-693 chr15 40985004 40985214 + 12.1 0.000 intron (NM_017553, intron 32 of 35) intron (NM_017553, intron 32 of 35) 31638 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chrX-1686 chrX 8269832 8270042 + 12.1 0.000 Intergenic L1ME2|LINE|L1 -98670 NM_016378 51480 Hs.279737 NM_016378 ENSG00000177504 VCX2 VCX-2r|VCX2R|VCXB variable charge X-linked 2 protein-coding chr13-1469 chr13 87671320 87671530 + 12.1 0.000 promoter-TSS (NR_033829) promoter-TSS (NR_033829) -462 NR_033829 642345 Hs.508337 NR_033829 ENSG00000228824 MIR4500HG - MIR4500 host gene ncRNA chr1-5055 chr1 94115969 94116179 + 12.1 0.000 intron (NM_000350, intron 1 of 49) (TCAC)n|Simple_repeat|Simple_repeat 5074 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr19-2654 chr19 9674942 9675152 + 12.1 0.000 promoter-TSS (NM_001130031) promoter-TSS (NM_001130031) 53 NM_001130032 54811 Hs.371107 NM_017656 ENSG00000171466 ZNF562 - zinc finger protein 562 protein-coding chr1-3903 chr1 65395909 65396119 + 12.1 0.000 intron (NM_001256864, intron 13 of 18) intron (NM_001256864, intron 13 of 18) -24638 NM_002303 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr17-2284 chr17 31473226 31473436 + 12.1 0.000 intron (NM_032932, intron 3 of 14) AluJr|SINE|Alu -14777 NM_001346748 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr11-2116 chr11 129767114 129767324 + 12.1 0.000 Intergenic Intergenic -48562 NM_001331211 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr16-3749 chr16 20003199 20003409 + 12.1 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 70474 NM_001002911 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr10-3207 chr10 100802794 100803004 + 12.1 0.000 intron (NM_003990, intron 6 of 10) intron (NM_003990, intron 6 of 10) 57188 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr1-6889 chr1 118712670 118712880 + 12.1 0.000 Intergenic Intergenic 275568 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr19-3581 chr19 48264750 48264960 + 12.1 0.000 Intergenic L1P4a|LINE|L1 -5226 NM_153608 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr15-794 chr15 62075985 62076195 + 12.1 0.000 Intergenic L5|LINE|RTE-X 9113 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding chr12-4901 chr12 66610405 66610615 + 12.1 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) 68566 NM_001366722 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr11-1987 chr11 32905302 32905512 + 12.1 0.000 intron (NM_001076786, intron 1 of 12) intron (NM_001076786, intron 1 of 12) 12596 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr11-2929 chr11 68431704 68431914 + 12.1 0.000 intron (NM_002335, intron 17 of 22) intron (NM_002335, intron 17 of 22) -28943 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr6-1790 chr6 112254452 112254662 + 12.1 0.000 promoter-TSS (NM_001105207) promoter-TSS (NM_001105207) 10 NM_002290 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr17-1120 chr17 26940652 26940862 + 12.1 0.000 Intergenic (GAATG)n|Satellite|Satellite 148484 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr6-3320 chr6 167496969 167497179 + 12.1 0.000 Intergenic FordPrefect_a|DNA|hAT-Tip100 -24284 NR_134591 105378127 Hs.58456 NR_134591 LOC105378127 - uncharacterized LOC105378127 ncRNA chr8-3456 chr8 94467931 94468141 + 12.1 0.000 intron (NM_012415, intron 1 of 14) LTR39|LTR|ERV1 7079 NM_012415 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr8-1382 chr8 18968074 18968284 + 12.1 0.000 intron (NM_015310, intron 1 of 15) intron (NM_015310, intron 1 of 15) 45524 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr16-3375 chr16 58306298 58306508 + 12.1 0.000 Intergenic L1MA8|LINE|L1 -11356 NM_001080492 221191 Hs.411239 NM_001080492 ENSG00000103023 PRSS54 CT67|KLKBL4 serine protease 54 protein-coding chr17-3233 chr17 17505091 17505301 + 12.1 0.000 TTS (NM_007169) TTS (NM_007169) -8801 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr16-2692 chr16 82417284 82417494 + 12.1 0.000 Intergenic Intergenic -209580 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr15-1472 chr15 101446179 101446389 + 12.1 0.000 intron (NM_138325, intron 1 of 13) L1MB3|LINE|L1 43423 NM_002570 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr1-4919 chr1 42529976 42530186 + 12.1 0.000 intron (NM_001355227, intron 6 of 18) MER44D|DNA|TcMar-Tigger -2939 NM_001080850 728621 Hs.729640 NM_001080850 ENSG00000186409 CCDC30 PFD6L|PFDN6L coiled-coil domain containing 30 protein-coding chr2-2247 chr2 227260532 227260742 + 12.1 0.000 intron (NM_000091, intron 19 of 51) intron (NM_000091, intron 19 of 51) 64527 NR_102371 654841 Hs.659982 NR_102371 ENSG00000236432 LOC654841 - uncharacterized LOC654841 ncRNA chr4-2888 chr4 78057814 78058024 + 12.1 0.000 5' UTR (NM_025074, exon 1 of 74) 5' UTR (NM_025074, exon 1 of 74) 349 NM_001166133 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr7-7519 chr7 103793225 103793435 + 12.1 0.000 intron (NM_005045, intron 3 of 64) intron (NM_005045, intron 3 of 64) 196186 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr4-4969 chr4 131181897 131182107 + 12.1 0.000 Intergenic MER66D|LTR|ERV1 -582836 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr2-6241 chr2 36517631 36517841 + 12.1 0.000 intron (NM_016441, intron 12 of 16) intron (NM_016441, intron 12 of 16) 80432 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr20-954 chr20 35318298 35318508 + 12.1 0.000 intron (NM_001184977, intron 5 of 7) intron (NM_001184977, intron 5 of 7) -25978 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr15-4066 chr15 69042731 69042941 + 12.1 0.000 intron (NM_024505, intron 10 of 15) intron (NM_024505, intron 10 of 15) 28141 NM_001184779 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr14-1344 chr14 88519042 88519252 + 12.1 0.000 intron (NM_007039, intron 2 of 18) intron (NM_007039, intron 2 of 18) 35860 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr13-937 chr13 95176926 95177136 + 12.1 0.000 intron (NM_001105515, intron 13 of 20) intron (NM_001105515, intron 13 of 20) -33313 NR_145733 109616987 NR_145733 SNORD13G - small nucleolar RNA, C/D box 13G snoRNA chr22-1229 chr22 43484433 43484643 + 12.1 0.000 intron (NM_001362786, intron 4 of 6) intron (NM_001362786, intron 4 of 6) -31716 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr11-4262 chr11 65671587 65671797 + 12.1 0.000 Intergenic MLT2B2|LTR|ERVL -8720 NM_001243985 5970 Hs.502875 NM_021975 ENSG00000173039 RELA CMCU|NFKB3|p65 RELA proto-oncogene, NF-kB subunit protein-coding chr9-2695 chr9 80157456 80157666 + 12.1 0.000 Intergenic Intergenic 182538 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr3-1521 chr3 158712073 158712283 + 12.1 0.000 intron (NM_206963, intron 2 of 5) intron (NM_206963, intron 2 of 5) 20279 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr15-1842 chr15 49060710 49060920 + 12.1 0.000 Intergenic Intergenic -14369 NM_014701 9728 Hs.9997 NM_014701 ENSG00000138593 SECISBP2L SBP2L|SLAN SECIS binding protein 2 like protein-coding chr1-2910 chr1 18886080 18886290 + 12.1 0.000 intron (NM_001161504, intron 4 of 14) intron (NM_001161504, intron 4 of 14) -2910 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 - microRNA 4695 ncRNA chr8-1530 chr8 92819384 92819594 + 12.1 0.000 Intergenic Intergenic -33429 NR_046114 441369 Hs.521683 NR_046114 ENSG00000248858 FLJ46284 - uncharacterized LOC441369 ncRNA chr2-2695 chr2 26557931 26558141 + 12.1 0.000 intron (NM_194248, intron 1 of 46) intron (NM_194248, intron 1 of 46) 720 NM_001287489 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr20-2189 chr20 50120828 50121038 + 12.1 0.000 3' UTR (NM_199129, exon 6 of 6) 3' UTR (NM_199129, exon 6 of 6) -4976 NM_001257393 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr5-2958 chr5 159263158 159263368 + 12.1 0.000 promoter-TSS (NM_145049) promoter-TSS (NM_145049) -27 NM_145049 134510 Hs.591733 NM_145049 ENSG00000164332 UBLCP1 CPUB1 ubiquitin like domain containing CTD phosphatase 1 protein-coding chr11-2963 chr11 77188479 77188689 + 12.1 0.000 intron (NM_001127180, intron 27 of 48) intron (NM_001127180, intron 27 of 48) 60338 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr3-5510 chr3 195628392 195628602 + 12.1 0.000 Intergenic Intergenic 23662 NR_136185 105374297 Hs.655175 NR_136185 LOC105374297 - uncharacterized LOC105374297 ncRNA chr19-7000 chr19 49239600 49239810 + 12.1 0.000 Intergenic AluSz|SINE|Alu 69163 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr4-2865 chr4 72577348 72577558 + 12.1 0.000 Intergenic Intergenic -8232 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr1-8357 chr1 60280446 60280656 + 12.1 0.000 Intergenic Intergenic -206781 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr1-5505 chr1 166342359 166342569 + 12.1 0.000 Intergenic LTR12C|LTR|ERV1 147575 NR_146890 105371590 Hs.575926 NR_146890 ENSG00000234142 LINC01675 - long intergenic non-protein coding RNA 1675 ncRNA chr8-1975 chr8 74941446 74941656 + 12.1 0.000 Intergenic L1M1|LINE|L1 -42954 NM_031461 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr3-2074 chr3 187923223 187923433 + 12.1 0.000 Intergenic Intergenic 53079 NR_135537 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr1-2395 chr1 178634543 178634753 + 12.1 0.000 Intergenic Intergenic -43101 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chr4-2969 chr4 113276960 113277170 + 12.1 0.000 intron (NM_001354275, intron 16 of 43) intron (NM_001354275, intron 16 of 43) -15774 NM_001354281 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr10-3813 chr10 132725731 132725941 + 12.1 0.000 intron (NM_005539, intron 8 of 15) intron (NM_005539, intron 8 of 15) 44561 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr4-4301 chr4 27702767 27702977 + 12.1 0.000 Intergenic Intergenic 485393 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr3-4519 chr3 111968318 111968528 + 12.1 0.000 intron (NM_001134437, intron 15 of 17) intron (NM_001134437, intron 15 of 17) -10603 NR_073570 55347 Hs.477115 NM_018394 ENSG00000144827 ABHD10 - abhydrolase domain containing 10 protein-coding chr6-911 chr6 149566859 149567069 + 12.1 0.000 intron (NM_138785, intron 1 of 7) CpG 589 NM_138785 116254 Hs.438872 NM_138785 ENSG00000055211 GINM1 C6orf72 glycoprotein integral membrane 1 protein-coding chr1-3554 chr1 234564577 234564787 + 12.1 0.000 Intergenic Intergenic -32903 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr17-3810 chr17 40749653 40749863 + 12.1 0.000 intron (NM_181534, intron 6 of 7) intron (NM_181534, intron 6 of 7) 5573 NM_181534 147183 Hs.55412 NM_181534 ENSG00000204897 KRT25 ARWH3|KRT24IRS1|KRT25A keratin 25 protein-coding chr2-3125 chr2 168515592 168515802 + 12.1 0.000 intron (NM_001256126, intron 1 of 10) intron (NM_001256126, intron 1 of 10) 59425 NM_001256126 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr12-1419 chr12 49667818 49668028 + 12.1 0.000 intron (NM_001367835, intron 2 of 26) intron (NM_001367835, intron 2 of 26) 37379 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr18-644 chr18 36212831 36213041 + 12.1 0.000 intron (NM_017947, intron 6 of 14) intron (NM_017947, intron 6 of 14) 25439 NM_017947 55034 Hs.405028 NM_017947 ENSG00000075643 MOCOS HMCS|MCS|MOS molybdenum cofactor sulfurase protein-coding chr3-11177 chr3 192068970 192069180 + 12.1 0.000 Intergenic THE1C|LTR|ERVL-MaLR -169555 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr7-3200 chr7 127984103 127984313 + 12.1 0.000 intron (NM_014390, intron 15 of 23) intron (NM_014390, intron 15 of 23) -13301 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr5-4366 chr5 171152499 171152709 + 12.1 0.000 intron (NM_022897, intron 14 of 27) intron (NM_022897, intron 14 of 27) -156644 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr12-2008 chr12 19978263 19978473 + 12.1 0.000 Intergenic OldhAT1|DNA|hAT-Ac -36317 NR_040098 100506393 Hs.658356 NR_040098 ENSG00000256287 LINC02398 - long intergenic non-protein coding RNA 2398 ncRNA chr15-896 chr15 32953028 32953238 + 12.1 0.000 intron (NM_001277313, intron 9 of 20) intron (NM_001277313, intron 9 of 20) 115041 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr14-1273 chr14 69039201 69039411 + 12.1 0.000 Intergenic Intergenic 59624 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr3-1713 chr3 55364594 55364804 + 12.1 0.000 Intergenic Intergenic 116699 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr13-2545 chr13 64023188 64023398 + 12.1 0.000 intron (NR_145420, intron 2 of 5) AluSc|SINE|Alu 52718 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr11-1619 chr11 64735495 64735705 + 12.1 0.000 exon (NM_001098670, exon 11 of 17) exon (NM_001098670, exon 11 of 17) 8542 NM_001318398 10235 Hs.99491 NM_005825 ENSG00000068831 RASGRP2 CALDAG-GEFI|CDC25L RAS guanyl releasing protein 2 protein-coding chr8-2194 chr8 134110326 134110536 + 12.1 0.000 Intergenic Intergenic 223935 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr20-1523 chr20 41213073 41213283 + 12.1 0.000 intron (NM_015035, intron 2 of 3) L1MB7|LINE|L1 44155 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr16-1838 chr16 64791855 64792065 + 12.1 0.000 Intergenic Intergenic 330103 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chrX-880 chrX 155027797 155028007 + 12.1 0.000 intron (NM_023934, intron 1 of 4) MER63B|DNA|hAT-Blackjack 1058 NM_023934 65991 Hs.356050 NM_023934 ENSG00000165775 FUNDC2 DC44|HCBP6|HCC3|PD03104 FUN14 domain containing 2 protein-coding chr6-2656 chr6 1993162 1993372 + 12.1 0.000 intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 182724 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr1-4562 chr1 81920238 81920448 + 12.1 0.000 intron (NM_001366002, intron 4 of 20) intron (NM_001366002, intron 4 of 20) 117890 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr15-1681 chr15 52653335 52653545 + 12.1 0.000 intron (NM_019600, intron 2 of 12) intron (NM_019600, intron 2 of 12) -1400 NM_001286495 56204 Hs.152385 NM_019600 ENSG00000047346 FAM214A KIAA1370 family with sequence similarity 214 member A protein-coding chr16-1762 chr16 88984119 88984329 + 12.1 0.000 Intergenic Intergenic -7017 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr6-2374 chr6 136790439 136790649 + 12.1 0.000 intron (NM_005923, intron 1 of 29) intron (NM_005923, intron 1 of 29) 1933 NM_005923 4217 Hs.186486 NM_005923 ENSG00000197442 MAP3K5 ASK1|MAPKKK5|MEKK5 mitogen-activated protein kinase kinase kinase 5 protein-coding chr10-5357 chr10 72326088 72326298 + 12.1 0.000 Intergenic LTR12C|LTR|ERV1 28726 NM_001365081 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr7-2304 chr7 92809803 92810013 + 12.1 0.000 intron (NM_001259, intron 2 of 7) intron (NM_001259, intron 2 of 7) 24051 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr3-3119 chr3 149414909 149415119 + 12.1 0.000 Intergenic Intergenic 37236 NR_109810 100874091 Hs.549633 NR_046650 ENSG00000240541 TM4SF1-AS1 - TM4SF1 antisense RNA 1 ncRNA chr13-1114 chr13 20825077 20825287 + 12.1 0.000 intron (NM_022459, intron 7 of 22) intron (NM_022459, intron 7 of 22) -51221 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr20-1233 chr20 34255503 34255713 + 12.1 0.000 Intergenic LTR13|LTR|ERVK -4757 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr3-3632 chr3 111865195 111865405 + 12.1 0.000 intron (NM_001134439, intron 1 of 17) intron (NM_001134439, intron 1 of 17) 5473 NM_001134439 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr18-723 chr18 35915277 35915487 + 12.1 0.000 Intergenic AluJb|SINE|Alu -10456 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr6-3148 chr6 111358491 111358701 + 12.1 0.000 intron (NM_001286431, intron 20 of 34) FAM|SINE|Alu 99257 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr15-1443 chr15 75639522 75639732 + 12.1 0.000 exon (NM_018285, exon 1 of 1) exon (NM_018285, exon 1 of 1) 696 NM_018285 55272 Hs.513043 NM_018285 ENSG00000177971 IMP3 BRMS2|C15orf12|MRPS4 IMP U3 small nucleolar ribonucleoprotein 3 protein-coding chr16-2542 chr16 27817906 27818116 + 12.1 0.000 intron (NM_001109763, intron 5 of 6) MER5A1|DNA|hAT-Charlie 70146 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr6-3238 chr6 144130831 144131041 + 12.1 0.000 Intergenic Intergenic -19581 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding chr11-3867 chr11 77865880 77866090 + 12.1 0.000 intron (NM_001316962, intron 3 of 4) intron (NM_001316962, intron 3 of 4) 24847 NM_001363564 28971 Hs.745040 NM_024684 ENSG00000087884 AAMDC C11orf67|CK067|PTD015 adipogenesis associated Mth938 domain containing protein-coding chr6-1046 chr6 2714365 2714575 + 12.1 0.000 intron (NM_001012418, intron 2 of 12) MER66C|LTR|ERV1 36452 NM_001012418 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr9-2617 chr9 16094974 16095184 + 12.1 0.000 Intergenic MSTA|LTR|ERVL-MaLR 158028 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr6-1635 chr6 111605973 111606183 + 12.1 0.000 promoter-TSS (NM_147200) promoter-TSS (NM_147200) 196 NM_001164281 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr3-2092 chr3 23600273 23600483 + 12.1 0.000 Intergenic Intergenic -205577 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr8-2605 chr8 56291055 56291265 + 12.1 0.000 Intergenic Intergenic 29616 NM_138969 195814 Hs.170673 NM_138969 ENSG00000170786 SDR16C5 EPHD-2|RDH#2|RDH-E2|RDHE2|retSDR2 short chain dehydrogenase/reductase family 16C member 5 protein-coding chr1-9865 chr1 65425808 65426018 + 12.1 0.000 intron (NM_001003679, intron 2 of 19) L2a|LINE|L2 5197 NM_001198681 54741 Hs.23581 NM_017526 ENSG00000213625 LEPROT LEPR|OB-RGRP|OBRGRP|VPS55 leptin receptor overlapping transcript protein-coding chr10-1619 chr10 71069509 71069719 + 12.1 0.000 Intergenic Intergenic 130561 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr11-3220 chr11 68206172 68206382 + 12.1 0.000 intron (NR_161380, intron 1 of 10) intron (NR_161380, intron 1 of 10) 7019 NM_001369424 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr1-3834 chr1 25804239 25804449 + 12.1 0.000 intron (NM_020451, intron 3 of 12) intron (NM_020451, intron 3 of 12) 4151 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr5-4849 chr5 63233809 63234019 + 12.1 0.000 Intergenic Intergenic 655095 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr17-2424 chr17 82599701 82599911 + 12.1 0.000 intron (NM_004514, intron 8 of 8) CpG 48638 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr11-2821 chr11 124075132 124075342 + 12.1 0.000 Intergenic MER52D|LTR|ERV1 -36236 NM_001004463 390265 Hs.553761 NM_001004463 ENSG00000182634 OR10G7 OR11-283 olfactory receptor family 10 subfamily G member 7 protein-coding chr14-1202 chr14 73662427 73662637 + 12.1 0.000 intron (NM_001201366, intron 5 of 8) MLT1D|LTR|ERVL-MaLR 17546 NM_031427 83544 Hs.271270 NM_031427 ENSG00000119661 DNAL1 C14orf168|CILD16|LC1 dynein axonemal light chain 1 protein-coding chr1-5046 chr1 89708755 89708965 + 12.1 0.000 intron (NM_032270, intron 2 of 2) intron (NM_032270, intron 2 of 2) 75740 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr1-2859 chr1 171852524 171852734 + 12.1 0.000 intron (NM_001278252, intron 1 of 14) L3|LINE|CR1 11131 NM_001136127 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chr1-5139 chr1 156042062 156042272 + 12.1 0.000 exon (NM_020131, exon 8 of 11) exon (NM_020131, exon 8 of 11) 11631 NM_001304342 56893 Hs.283739 NM_020131 ENSG00000160803 UBQLN4 A1U|A1Up|C1orf6|CIP75|UBIN ubiquilin 4 protein-coding chr7-2589 chr7 131859176 131859386 + 12.1 0.000 Intergenic Intergenic -50939 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr6-2740 chr6 89552259 89552469 + 12.1 0.000 intron (NM_001242809, intron 1 of 15) intron (NM_001242809, intron 1 of 15) -9954 NM_001242811 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr22-1199 chr22 21567720 21567930 + 12.1 0.000 non-coding (NR_046082, exon 1 of 4) intron (NR_028436, intron 1 of 4) 111 NR_028436 7332 Hs.108104 NM_003347 ENSG00000185651 UBE2L3 E2-F1|L-UBC|UBCH7|UbcM4 ubiquitin conjugating enzyme E2 L3 protein-coding chr7-2345 chr7 1738790 1739000 + 12.1 0.000 non-coding (NR_120508, exon 2 of 2) non-coding (NR_120508, exon 2 of 2) 3415 NR_120509 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr18-983 chr18 5476956 5477166 + 12.1 0.000 intron (NM_001281535, intron 5 of 21) intron (NM_001281535, intron 5 of 21) 63495 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr6-2010 chr6 34695317 34695527 + 12.1 0.000 promoter-TSS (NR_134625) promoter-TSS (NR_134625) -732 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr18-1091 chr18 53796160 53796370 + 12.1 0.000 Intergenic Intergenic -215206 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr9-3918 chr9 134851199 134851409 + 12.1 0.000 promoter-TSS (NR_037460) promoter-TSS (NR_037460) -497 NR_039696 100616212 NR_039696 ENSG00000266514 MIR3689F mir-3689f microRNA 3689f ncRNA chr2-2522 chr2 180625545 180625755 + 12.1 0.000 Intergenic Intergenic -66454 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr1-5701 chr1 59484256 59484466 + 12.1 0.000 intron (NM_001350794, intron 6 of 14) intron (NM_001350794, intron 6 of 14) -31269 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr17-2919 chr17 45013001 45013211 + 12.1 0.000 Intergenic Intergenic 38526 NM_001288655 79877 Hs.463148 NM_024819 ENSG00000172992 DCAKD - dephospho-CoA kinase domain containing protein-coding chr11-3963 chr11 1298100 1298310 + 12.1 0.000 intron (NM_019009, intron 1 of 5) intron (NM_019009, intron 1 of 5) 4585 NM_001318514 54472 Hs.368527 NM_019009 ENSG00000078902 TOLLIP IL-1RAcPIP toll interacting protein protein-coding chr7-1095 chr7 2873546 2873756 + 12.1 0.000 Intergenic Intergenic -29343 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr4-1955 chr4 128644082 128644292 + 12.1 0.000 Intergenic HERVH-int|LTR|ERV1 -165513 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr13-2116 chr13 90105833 90106043 + 12.1 0.000 intron (NR_047489, intron 3 of 5) LTR16B2|LTR|ERVL 13779 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr3-2388 chr3 179811769 179811979 + 12.1 0.000 intron (NR_146167, intron 9 of 13) intron (NR_146167, intron 9 of 13) -86320 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr1-5356 chr1 234795906 234796116 + 12.1 0.000 Intergenic Intergenic -35955 NR_148962 100130249 Hs.617350 NR_148962 ENSG00000279261 PP2672 - uncharacterized LOC100130249 ncRNA chr17-2987 chr17 69417764 69417974 + 12.1 0.000 intron (NM_002758, intron 1 of 11) intron (NM_002758, intron 1 of 11) 3172 NM_002758 5608 Hs.49329 NM_002758 ENSG00000108984 MAP2K6 MAPKK6|MEK6|MKK6|PRKMK6|SAPKK-3|SAPKK3 mitogen-activated protein kinase kinase 6 protein-coding chr16-1816 chr16 31529204 31529414 + 12.1 0.000 TTS (NM_001318221) TTS (NM_001318221) 1332 NM_001318222 51327 Hs.274309 NM_016633 ENSG00000169877 AHSP EDRF|ERAF alpha hemoglobin stabilizing protein protein-coding chr11-1327 chr11 113314527 113314737 + 12.1 0.000 promoter-TSS (NR_147891) promoter-TSS (NR_147891) 49 NM_001318533 54970 Hs.288772 NM_017868 ENSG00000149292 TTC12 TPARM tetratricopeptide repeat domain 12 protein-coding chr1-6053 chr1 86846287 86846497 + 12.1 0.000 Intergenic Intergenic 67734 NM_004261 9403 Hs.362728 NM_004261 ENSG00000183291 SELENOF SEP15 selenoprotein F protein-coding chr16-2361 chr16 56971494 56971704 + 12.1 0.000 intron (NM_001286085, intron 7 of 14) intron (NM_001286085, intron 7 of 14) 9649 NM_000078 1071 Hs.89538 NM_000078 ENSG00000087237 CETP BPIFF|HDLCQ10 cholesteryl ester transfer protein protein-coding chr2-5085 chr2 11087548 11087758 + 12.1 0.000 Intergenic AluSz|SINE|Alu 44523 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr11-2260 chr11 119169456 119169666 + 12.1 0.000 intron (NM_001282144, intron 1 of 9) intron (NM_001282144, intron 1 of 9) 836 NM_001282144 79671 Hs.524082 NM_024618 ENSG00000160703 NLRX1 CLR11.3|DLNB26|NOD26|NOD5|NOD9 NLR family member X1 protein-coding chr14-2600 chr14 53924968 53925178 + 12.1 0.000 Intergenic Intergenic 23411 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr3-2085 chr3 10950821 10951031 + 12.1 0.000 Intergenic L2c|LINE|L2 -41808 NM_001348250 6529 Hs.443874 NM_003042 ENSG00000157103 SLC6A1 GABATHG|GABATR|GAT1|MAE solute carrier family 6 member 1 protein-coding chr4-2478 chr4 6438436 6438646 + 12.1 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) -17423 NM_001206996 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr5-1110 chr5 14118717 14118927 + 12.1 0.000 Intergenic Intergenic -24520 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr13-559 chr13 28138181 28138391 + 12.1 0.000 promoter-TSS (NM_175854) promoter-TSS (NM_175854) -259 NM_175854 255967 Hs.645015 NM_175854 ENSG00000152520 PAN3 - poly(A) specific ribonuclease subunit PAN3 protein-coding chr16-3255 chr16 87718813 87719023 + 12.1 0.000 intron (NM_001184856, intron 6 of 10) SVA_B|Retroposon|SVA 47068 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr8-3087 chr8 24783725 24783935 + 12.1 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -129931 NM_005382 4741 Hs.458657 NM_005382 ENSG00000104722 NEFM NEF3|NF-M|NFM neurofilament medium protein-coding chr5-4466 chr5 7513440 7513650 + 12.1 0.000 intron (NM_020546, intron 2 of 24) intron (NM_020546, intron 2 of 24) 117407 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chr4-973 chr4 70705319 70705529 + 12.1 0.000 intron (NM_001130709, intron 1 of 11) CpG 487 NM_001130709 22902 Hs.740904 NM_014961 ENSG00000018189 RUFY3 RIPX|SINGAR1|ZFYVE30 RUN and FYVE domain containing 3 protein-coding chr7-2367 chr7 20083913 20084123 + 12.1 0.000 intron (NR_110114, intron 1 of 5) intron (NR_110114, intron 1 of 5) 56408 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr1-3896 chr1 61888000 61888210 + 12.1 0.000 intron (NM_001350145, intron 22 of 43) intron (NM_001350145, intron 22 of 43) 42030 NR_162146 113219465 NR_162146 MIR12132 - microRNA 12132 ncRNA chr14-2592 chr14 51756907 51757117 + 12.1 0.000 Intergenic Intergenic 39729 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr2-2918 chr2 238601819 238602029 + 12.1 0.000 Intergenic Intergenic -46425 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr15-2271 chr15 51139108 51139318 + 12.1 0.000 intron (NR_146310, intron 1 of 2) L1MB4|LINE|L1 -33937 NM_207381 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr6-1526 chr6 36131868 36132078 + 12.1 0.000 intron (NR_072996, intron 2 of 9) MIR|SINE|MIR 1460 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr22-972 chr22 25154359 25154569 + 12.1 0.000 intron (NM_001145206, intron 4 of 10) intron (NM_001145206, intron 4 of 10) -41772 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr18-1369 chr18 29679858 29680068 + 12.1 0.000 Intergenic L1MC1|LINE|L1 -618947 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr15-1005 chr15 71761846 71762056 + 12.1 0.000 intron (NM_001286429, intron 9 of 11) intron (NM_001286429, intron 9 of 11) -48603 NM_016346 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding chrX-1377 chrX 153409183 153409393 + 12.1 0.000 Intergenic Intergenic -7938 NM_001351293 649238 Hs.112603 NM_001351293 ENSG00000214897 PNMA6E - PNMA family member 6E protein-coding chr17-3718 chr17 18233642 18233852 + 12.1 0.000 intron (NM_004140, intron 4 of 22) intron (NM_004140, intron 4 of 22) 8112 NM_004140 3996 Hs.513983 NM_004140 ENSG00000131899 LLGL1 DLG4|HUGL|HUGL-1|HUGL1|LLGL|Lgl1|Mgl1 LLGL scribble cell polarity complex component 1 protein-coding chr22-992 chr22 40332343 40332553 + 12.1 0.000 3' UTR (NM_001024843, exon 24 of 24) 3' UTR (NM_001024843, exon 24 of 24) -14052 NM_001363840 158 Hs.75527 NM_000026 ENSG00000239900 ADSL AMPS|ASASE|ASL adenylosuccinate lyase protein-coding chr11-3391 chr11 131737378 131737588 + 12.1 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -73927 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr5-3073 chr5 35323207 35323417 + 12.1 0.000 Intergenic MIRc|SINE|MIR -92825 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr8-2154 chr8 38527386 38527596 + 12.1 0.000 intron (NM_207412, intron 1 of 2) intron (NM_207412, intron 1 of 2) 1171 NM_207412 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr7-2601 chr7 139527277 139527487 + 12.1 0.000 intron (NM_001353368, intron 1 of 3) intron (NM_001353368, intron 1 of 3) 3697 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr7-7180 chr7 7284600 7284810 + 12.1 0.000 Intergenic L1MA9|LINE|L1 29551 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr11-4744 chr11 84290725 84290935 + 12.1 0.000 intron (NM_001142699, intron 7 of 27) MIRb|SINE|MIR -17550 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-535 chr12 132827791 132828001 + 12.1 0.000 intron (NM_001172557, intron 1 of 15) FLAM_C|SINE|Alu 493 NM_005895 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr2-5600 chr2 177229171 177229381 + 12.1 0.000 Intergenic Intergenic 16482 NR_138470 220988 Hs.516539 NM_194247 ENSG00000170144 HNRNPA3 2610510D13Rik|D10S102|FBRNP|HNRPA3 heterogeneous nuclear ribonucleoprotein A3 protein-coding chr20-706 chr20 36941700 36941910 + 12.1 0.000 intron (NM_015474, intron 2 of 15) intron (NM_015474, intron 2 of 15) 9903 NM_001363729 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr6-1779 chr6 88848808 88849018 + 12.1 0.000 intron (NM_001286428, intron 9 of 13) L1ME3Cz|LINE|L1 114705 NM_001286428 8732 Hs.567378 NM_003800 ENSG00000111880 RNGTT CAP1A|HCE|HCE1|hCAP RNA guanylyltransferase and 5'-phosphatase protein-coding chr19-914 chr19 17947889 17948099 + 12.1 0.000 Intergenic CpG -3308 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr7-4909 chr7 129538643 129538853 + 12.1 0.000 Intergenic Intergenic 36217 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr16-1746 chr16 83623530 83623740 + 12.1 0.000 intron (NM_001220489, intron 7 of 12) intron (NM_001220489, intron 7 of 12) 115289 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr2-2817 chr2 61247368 61247578 + 12.1 0.000 intron (NM_014709, intron 49 of 79) intron (NM_014709, intron 49 of 79) 70055 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr7-2399 chr7 50502388 50502598 + 12.1 0.000 intron (NM_001242888, intron 5 of 12) intron (NM_001242888, intron 5 of 12) -29266 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr18-1056 chr18 21826218 21826428 + 12.1 0.000 promoter-TSS (NR_029675) promoter-TSS (NR_029675) -538 NR_029675 406922 NR_029675 ENSG00000283927 MIR133A1 MIRN133A1|mir-133a-1 microRNA 133a-1 ncRNA chr11-1101 chr11 67277625 67277835 + 12.1 0.000 intron (NM_001619, intron 2 of 20) intron (NM_001619, intron 2 of 20) 11257 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr11-7135 chr11 125807679 125807889 + 12.1 0.000 Intergenic L1M1|LINE|L1 19657 NM_001129883 100169851 Hs.131278 NM_001129883 ENSG00000236027 PATE3 HEL-127|PATE-DJ prostate and testis expressed 3 protein-coding chr5-1403 chr5 143682289 143682499 + 12.1 0.000 Intergenic Intergenic 2534 NR_049829 100846991 NR_049829 ENSG00000266478 MIR5197 - microRNA 5197 ncRNA chr7-6152 chr7 125061869 125062079 + 12.1 0.000 intron (NR_125718, intron 4 of 10) MIRb|SINE|MIR -122595 NR_110188 101928283 Hs.566650 NR_110188 ENSG00000224897 LOC101928283 - uncharacterized LOC101928283 ncRNA chr12-3000 chr12 122475433 122475643 + 12.1 0.000 intron (NM_001350938, intron 10 of 10) intron (NM_001350938, intron 10 of 10) 25394 NM_001350937 55596 Hs.37706 NM_017612 ENSG00000033030 ZCCHC8 - zinc finger CCHC-type containing 8 protein-coding chr17-2740 chr17 78471697 78471907 + 12.1 0.000 intron (NM_173628, intron 54 of 80) intron (NM_173628, intron 54 of 80) -13108 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr7-3215 chr7 135856279 135856489 + 12.1 0.000 Intergenic L1PA8|LINE|L1 -107571 NM_001369697 389558 Hs.55200 NM_205855 ENSG00000189320 FAM180A UNQ1940 family with sequence similarity 180 member A protein-coding chr9-3557 chr9 68421140 68421350 + 12.1 0.000 intron (NM_021965, intron 6 of 10) intron (NM_021965, intron 6 of 10) -63379 NR_015423 572558 Hs.552819 NR_015423 ENSG00000224958 PGM5-AS1 FAM233A PGM5 antisense RNA 1 ncRNA chr3-7261 chr3 196459393 196459603 + 12.1 0.000 Intergenic AluSz|SINE|Alu -27071 NM_015562 26043 Hs.518524 NM_015562 ENSG00000163960 UBXN7 UBXD7 UBX domain protein 7 protein-coding chr5-6087 chr5 13358176 13358386 + 12.1 0.000 Intergenic Intergenic -325395 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr11-6998 chr11 117148593 117148803 + 12.1 0.000 intron (NR_110282, intron 1 of 2) FLAM_A|SINE|Alu 4411 NM_001184746 5049 Hs.728488 NM_002572 ENSG00000168092 PAFAH1B2 HEL-S-303 platelet activating factor acetylhydrolase 1b catalytic subunit 2 protein-coding chr4-2415 chr4 105471642 105471852 + 12.1 0.000 intron (NM_176869, intron 1 of 11) intron (NM_176869, intron 1 of 11) 2315 NM_176869 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chr2-8727 chr2 158811154 158811364 + 12.1 0.000 intron (NM_001017920, intron 3 of 3) intron (NM_001017920, intron 3 of 3) 15942 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr9-6404 chr9 36039702 36039912 + 12.1 0.000 intron (NM_021111, intron 1 of 20) intron (NM_021111, intron 1 of 20) 2894 NM_001316348 8434 Hs.388918 NM_021111 ENSG00000122707 RECK ST15 reversion inducing cysteine rich protein with kazal motifs protein-coding chr3-5218 chr3 80733987 80734197 + 12.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -30805 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr4-2414 chr4 104890629 104890839 + 12.1 0.000 Intergenic Intergenic -255141 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr17-3299 chr17 56099670 56099880 + 12.1 0.000 Intergenic L2c|LINE|L2 -53700 NM_001370326 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr20-1458 chr20 62830119 62830329 + 12.1 0.000 intron (NM_001853, intron 22 of 31) intron (NM_001853, intron 22 of 31) 13174 NM_001853 1299 Hs.716639 NM_001853 ENSG00000092758 COL9A3 DJ885L7.4.1|EDM3|IDD|MED collagen type IX alpha 3 chain protein-coding chr1-5299 chr1 216316422 216316632 + 12.1 0.000 intron (NM_206933, intron 9 of 71) intron (NM_206933, intron 9 of 71) 106869 NM_007123 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr17-2143 chr17 40342957 40343167 + 12.1 0.000 promoter-TSS (NR_110861) promoter-TSS (NR_110861) 74 NR_110861 101929693 Hs.655717 NR_110861 ENSG00000265666 RARA-AS1 - RARA antisense RNA 1 ncRNA chr3-2991 chr3 97823693 97823903 + 12.1 0.000 intron (NM_153605, intron 1 of 21) intron (NM_153605, intron 1 of 21) 1787 NM_153605 131544 Hs.733378 NM_153605 ENSG00000080200 CRYBG3 DKFZp667G2110|vlAKAP crystallin beta-gamma domain containing 3 protein-coding chr2-11224 chr2 162754736 162754946 + 12.1 0.000 intron (NM_033272, intron 2 of 15) intron (NM_033272, intron 2 of 15) -14095 NR_110258 101929570 Hs.470445 NR_110258 ENSG00000237750 LOC101929570 - uncharacterized LOC101929570 ncRNA chr4-4976 chr4 132587815 132588025 + 12.1 0.000 Intergenic Intergenic -3169 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr8-2371 chr8 38347277 38347487 + 12.1 0.000 intron (NM_023034, intron 2 of 23) intron (NM_023034, intron 2 of 23) 34889 NM_023034 54904 Hs.434966 NM_017778 ENSG00000147548 NSD3 KMT3F|KMT3G|WHISTLE|WHSC1L1|pp14328 nuclear receptor binding SET domain protein 3 protein-coding chr19-710 chr19 7198046 7198256 + 12.1 0.000 intron (NM_001079817, intron 2 of 20) CpG 96263 NM_000208 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr12-1828 chr12 13223192 13223402 + 12.1 0.000 Intergenic L2c|LINE|L2 26571 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr1-4601 chr1 150314194 150314404 + 12.1 0.000 Intergenic L2a|LINE|L2 -7169 NM_001350529 9129 Hs.11776 NM_004698 ENSG00000117360 PRPF3 HPRP3|HPRP3P|PRP3|Prp3p|RP18|SNRNP90 pre-mRNA processing factor 3 protein-coding chr5-2147 chr5 90765022 90765232 + 12.1 0.000 intron (NR_003149, intron 59 of 89) L1PA17|LINE|L1 206330 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr6-884 chr6 84052679 84052889 + 12.1 0.000 intron (NM_001346542, intron 2 of 4) intron (NM_001346542, intron 2 of 4) 18665 NM_001346544 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr2-2020 chr2 96145190 96145400 + 12.1 0.000 exon (NM_004418, exon 1 of 4) exon (NM_004418, exon 1 of 4) 145 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr2-9008 chr2 195576072 195576282 + 12.1 0.000 Intergenic Intergenic -80781 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr15-1057 chr15 65841338 65841548 + 12.1 0.000 Intergenic AluJr|SINE|Alu -28048 NM_004663 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr2-2299 chr2 71130018 71130228 + 12.1 0.000 promoter-TSS (NM_005791) promoter-TSS (NM_005791) 106 NM_032601 84693 Hs.94949 NM_032601 ENSG00000124370 MCEE GLOD2 methylmalonyl-CoA epimerase protein-coding chr22-1232 chr22 44962983 44963193 + 12.1 0.000 intron (NM_001284296, intron 2 of 13) MIRc|SINE|MIR 40531 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr2-1490 chr2 200862567 200862777 + 12.1 0.000 intron (NR_027856, intron 1 of 10) LTR7B|LTR|ERV1 1889 NM_001162407 1195 Hs.433732 NM_004071 ENSG00000013441 CLK1 CLK|CLK/STY|STY CDC like kinase 1 protein-coding chr5-3123 chr5 55324758 55324968 + 12.1 0.000 intron (NM_015360, intron 3 of 26) MIRb|SINE|MIR 16874 NM_015360 23517 Hs.274531 NM_015360 ENSG00000039123 MTREX Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118 Mtr4 exosome RNA helicase protein-coding chr9-3739 chr9 120532594 120532804 + 12.1 0.000 intron (NR_073558, intron 7 of 37) intron (NR_073558, intron 7 of 37) 47468 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr18-1256 chr18 56068275 56068485 + 12.1 0.000 intron (NR_148972, intron 3 of 8) LTR78B|LTR|ERV1 26102 NR_146510 102724698 NR_146510 ENSG00000267057 LINC01905 - long intergenic non-protein coding RNA 1905 ncRNA chr2-3530 chr2 240170309 240170519 + 12.1 0.000 Intergenic Intergenic -29756 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr15-1305 chr15 57857692 57857902 + 12.1 0.000 Intergenic Intergenic 151083 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chrX-3947 chrX 10922032 10922242 + 12.1 0.000 Intergenic L2b|LINE|L2 -88454 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr17-2700 chr17 59149133 59149343 + 12.1 0.000 intron (NM_182620, intron 1 of 3) AluJr|SINE|Alu 1983 NR_029842 407027 NR_029842 ENSG00000207996 MIR301A MIR301|MIRN301|MIRN301A|mir-301a microRNA 301a ncRNA chrX-1589 chrX 83007339 83007549 + 12.1 0.000 Intergenic L1M4|LINE|L1 -500846 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr9-3217 chr9 134244676 134244886 + 12.1 0.000 Intergenic L1MEg|LINE|L1 50616 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr9-4191 chr9 33657138 33657348 + 12.1 0.000 Intergenic Intergenic -20025 NR_103745 101243555 Hs.598470 NR_103745 ENSG00000281128 PTENP1-AS PTENP1as|PTENpg1-asRNA PTENP1 antisense RNA ncRNA chr6-4185 chr6 2441928 2442138 + 12.1 0.000 Intergenic Intergenic -192467 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr2-8546 chr2 133092707 133092917 + 12.1 0.000 intron (NM_207481, intron 6 of 17) intron (NM_207481, intron 6 of 17) -173383 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr16-1759 chr16 88725822 88726032 + 12.1 0.000 intron (NM_001142864, intron 27 of 50) intron (NM_001142864, intron 27 of 50) -5253 NR_103774 100289580 Hs.437712 NM_207451 LOC100289580 - uncharacterized LOC100289580 ncRNA chr20-651 chr20 36555471 36555681 + 12.1 0.000 intron (NR_109939, intron 2 of 4) intron (NR_109939, intron 2 of 4) 14057 NM_006097 10398 Hs.504687 NM_006097 ENSG00000101335 MYL9 LC20|MLC-2C|MLC2|MRLC1|MYRL2 myosin light chain 9 protein-coding chr2-6833 chr2 66325156 66325366 + 12.1 0.000 Intergenic Intergenic 33067 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr1-4383 chr1 158999692 158999902 + 12.1 0.000 promoter-TSS (NM_001364867) promoter-TSS (NM_001364867) -179 NM_001364867 3428 Hs.380250 NM_005531 ENSG00000163565 IFI16 IFNGIP1|PYHIN2 interferon gamma inducible protein 16 protein-coding chr9-3202 chr9 132182630 132182840 + 12.1 0.000 intron (NM_032536, intron 2 of 7) intron (NM_032536, intron 2 of 7) 20677 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr17-2409 chr17 81190353 81190563 + 12.1 0.000 intron (NM_001319228, intron 24 of 25) intron (NM_001319228, intron 24 of 25) -24237 NM_001080395 9625 Hs.514575 NM_004920 ENSG00000181409 AATK AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP apoptosis associated tyrosine kinase protein-coding chr9-3180 chr9 126640311 126640521 + 12.1 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 25973 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr17-5790 chr17 63395700 63395910 + 12.1 0.000 exon (NM_025185, exon 17 of 26) exon (NM_025185, exon 17 of 26) 44462 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr20-999 chr20 60222285 60222495 + 12.1 0.000 intron (NR_046099, intron 3 of 4) intron (NR_046099, intron 3 of 4) 83898 NR_046099 284757 Hs.542528 NM_001004305 ENSG00000228340 MIR646HG - MIR646 host gene ncRNA chr9-2083 chr9 77488581 77488791 + 12.1 0.000 intron (NR_121184, intron 2 of 4) L1M3f|LINE|L1 41037 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr7-2446 chr7 131620586 131620796 + 12.1 0.000 Intergenic Intergenic -64063 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr14-1954 chr14 32611846 32612056 + 12.1 0.000 intron (NM_004274, intron 7 of 13) intron (NM_004274, intron 7 of 13) 282653 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr1-4004 chr1 169806762 169806972 + 12.1 0.000 intron (NM_001366772, intron 7 of 22) MIR|SINE|MIR 11827 NM_001366769 55732 Hs.443551 NM_018186 ENSG00000000460 C1orf112 - chromosome 1 open reading frame 112 protein-coding chr9-1628 chr9 133709115 133709325 + 12.1 0.000 intron (NM_001134707, intron 10 of 20) intron (NM_001134707, intron 10 of 20) 29132 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr9-4880 chr9 4502604 4502814 + 12.1 0.000 intron (NM_004170, intron 1 of 11) intron (NM_004170, intron 1 of 11) 12241 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr11-3546 chr11 19131529 19131739 + 12.1 0.000 intron (NM_001001483, intron 1 of 15) L1MEc|LINE|L1 14466 NM_019028 54503 Hs.188569 NM_019028 ENSG00000177054 ZDHHC13 HIP14L|HIP3RP zinc finger DHHC-type containing 13 protein-coding chr18-763 chr18 10861111 10861321 + 12.1 0.000 intron (NM_022068, intron 5 of 51) intron (NM_022068, intron 5 of 51) -101567 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr2-3328 chr2 178935636 178935846 + 12.1 0.000 intron (NM_001316745, intron 6 of 11) L1PA14|LINE|L1 114396 NM_001316745 285025 Hs.324341 NM_173648 ENSG00000163492 CCDC141 CAMDI coiled-coil domain containing 141 protein-coding chr13-947 chr13 99191755 99191965 + 12.1 0.000 Intergenic Intergenic 8895 NR_036532 100289373 Hs.225914 NR_036531 ENSG00000228889 UBAC2-AS1 - UBAC2 antisense RNA 1 ncRNA chr19-2793 chr19 47134715 47134925 + 12.0 0.000 intron (NR_027280, intron 1 of 8) intron (NR_027280, intron 1 of 8) 3985 NM_005500 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr5-3215 chr5 84997023 84997233 + 12.0 0.000 Intergenic Intergenic -612248 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr1-7769 chr1 40832575 40832785 + 12.0 0.000 intron (NM_004700, intron 10 of 13) intron (NM_004700, intron 10 of 13) 29683 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr11-5991 chr11 20255185 20255395 + 12.0 0.000 Intergenic Intergenic -94815 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chrX-1237 chrX 93166601 93166811 + 12.0 0.000 Intergenic L1MA1|LINE|L1 -341803 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr4-2211 chr4 138301593 138301803 + 12.0 0.000 Intergenic Intergenic -8013 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr6-1360 chr6 48639178 48639388 + 12.0 0.000 Intergenic L1PA13|LINE|L1 -570594 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr2-2940 chr2 10059934 10060144 + 12.0 0.000 intron (NM_001037160, intron 2 of 2) intron (NM_001037160, intron 2 of 2) 15794 NM_001177718 8462 Hs.12229 NM_003597 ENSG00000172059 KLF11 FKLF|FKLF1|MODY7|TIEG2|Tieg3 Kruppel like factor 11 protein-coding chr15-2430 chr15 72991653 72991863 + 12.0 0.000 Intergenic L1MB7|LINE|L1 -60705 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr6-7458 chr6 56297486 56297696 + 12.0 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) -50011 NM_030820 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr2-5640 chr2 191695992 191696202 + 12.0 0.000 intron (NR_131917, intron 2 of 2) MLT1H2|LTR|ERVL-MaLR 5916 NR_131917 105747689 Hs.104972 NR_131917 LOC105747689 - uncharacterized LOC105747689 ncRNA chr1-3059 chr1 13767052 13767262 + 12.0 0.000 intron (NM_001135610, intron 6 of 7) intron (NM_001135610, intron 6 of 7) 17742 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr6-7753 chr6 93021010 93021220 + 12.0 0.000 Intergenic Intergenic 398444 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr14-2151 chr14 88614472 88614682 + 12.0 0.000 non-coding (NR_136936, exon 16 of 16) non-coding (NR_136936, exon 16 of 16) 20157 NM_207662 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr1-5202 chr1 178716194 178716404 + 12.0 0.000 Intergenic Intergenic -8848 NM_001286247 55103 Hs.632485 NM_018037 ENSG00000116191 RALGPS2 dJ595C2.1 Ral GEF with PH domain and SH3 binding motif 2 protein-coding chr4-3078 chr4 148120437 148120647 + 12.0 0.000 intron (NR_148974, intron 4 of 6) intron (NR_148974, intron 4 of 6) 321872 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr3-2641 chr3 11170174 11170384 + 12.0 0.000 intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) 15786 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr5-2261 chr5 31133527 31133737 + 12.0 0.000 Intergenic Intergenic -60054 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chrX-1506 chrX 11252206 11252416 + 12.0 0.000 intron (NM_001287242, intron 2 of 12) intron (NM_001287242, intron 2 of 12) 13681 NM_013423 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr15-2166 chr15 78634801 78635011 + 12.0 0.000 intron (NM_001256567, intron 2 of 4) intron (NM_001256567, intron 2 of 4) 6304 NM_001256567 1143 Hs.624178 NM_000750 ENSG00000117971 CHRNB4 - cholinergic receptor nicotinic beta 4 subunit protein-coding chr3-6209 chr3 63662577 63662787 + 12.0 0.000 intron (NM_001080537, intron 3 of 3) intron (NM_001080537, intron 3 of 3) 10007 NM_001080537 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr3-7060 chr3 175969957 175970167 + 12.0 0.000 Intergenic L1MB7|LINE|L1 -193729 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr1-9257 chr1 24672680 24672890 + 12.0 0.000 non-coding (NR_159380, exon 19 of 19) non-coding (NR_159380, exon 19 of 19) 29206 NM_001366597 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr20-3279 chr20 5977069 5977279 + 12.0 0.000 intron (NM_182802, intron 12 of 18) MER91B|DNA|hAT-Tip100 26522 NM_001281522 84515 Hs.597484 NM_032485 ENSG00000125885 MCM8 C20orf154|POF10|dJ967N21.5 minichromosome maintenance 8 homologous recombination repair factor protein-coding chr8-1727 chr8 141218769 141218979 + 12.0 0.000 exon (NM_001080431, exon 4 of 8) exon (NM_001080431, exon 4 of 8) 9700 NM_001286648 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr14-3139 chr14 68432166 68432376 + 12.0 0.000 intron (NM_133509, intron 9 of 10) L1PA5|LINE|L1 196516 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr2-1831 chr2 140643894 140644104 + 12.0 0.000 intron (NM_018557, intron 41 of 90) intron (NM_018557, intron 41 of 90) -57314 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr4-8182 chr4 131554156 131554366 + 12.0 0.000 Intergenic AluSq2|SINE|Alu -210577 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr3-2620 chr3 185823797 185824007 + 12.0 0.000 intron (NR_138486, intron 1 of 15) CpG 1140 NM_001291869 10644 Hs.35354 NM_006548 ENSG00000073792 IGF2BP2 IMP-2|IMP2|VICKZ2 insulin like growth factor 2 mRNA binding protein 2 protein-coding chr3-3204 chr3 192571463 192571673 + 12.0 0.000 intron (NM_004113, intron 2 of 5) intron (NM_004113, intron 2 of 5) 56546 NR_046598 100873987 Hs.628012 NR_046598 ENSG00000230126 FGF12-AS2 - FGF12 antisense RNA 2 ncRNA chrX-779 chrX 43644309 43644519 + 12.0 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -10493 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr22-550 chr22 49936078 49936288 + 12.0 0.000 Intergenic CpG 17549 NR_104295 79174 Hs.211282 NM_024324 ENSG00000184164 CRELD2 - cysteine rich with EGF like domains 2 protein-coding chr14-2052 chr14 65258364 65258574 + 12.0 0.000 Intergenic LTR26|LTR|ERV1 -36122 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr5-3328 chr5 132420769 132420979 + 12.0 0.000 intron (NR_161242, intron 2 of 3) intron (NR_161242, intron 2 of 3) 9945 NR_161242 441108 Hs.658288 NM_001013717 C5orf56 - chromosome 5 open reading frame 56 ncRNA chr17-1859 chr17 30245075 30245285 + 12.0 0.000 Intergenic Intergenic -9483 NM_001045 6532 Hs.29792 NM_001045 ENSG00000108576 SLC6A4 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT solute carrier family 6 member 4 protein-coding chr11-4328 chr11 71429080 71429290 + 12.0 0.000 Intergenic Intergenic -5831 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr17-5221 chr17 17055743 17055953 + 12.0 0.000 intron (NM_201274, intron 1 of 23) intron (NM_201274, intron 1 of 23) 13088 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr10-2728 chr10 111035618 111035828 + 12.0 0.000 Intergenic L1MC4|LINE|L1 -41306 NM_000681 150 Hs.249159 NM_000681 ENSG00000150594 ADRA2A ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32 adrenoceptor alpha 2A protein-coding chr6-752 chr6 83193146 83193356 + 12.0 0.000 promoter-TSS (NM_001322336) promoter-TSS (NM_001322336) 14 NM_001199918 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr5-5125 chr5 103075265 103075475 + 12.0 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 44768 NM_001317954 54826 Hs.24088 NM_017676 ENSG00000145723 GIN1 GIN-1|TGIN1|ZH2C2 gypsy retrotransposon integrase 1 protein-coding chr7-2157 chr7 48464885 48465095 + 12.0 0.000 intron (NM_152701, intron 43 of 61) intron (NM_152701, intron 43 of 61) 293532 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr11-10121 chr11 88151169 88151379 + 12.0 0.000 intron (NM_022337, intron 1 of 2) intron (NM_022337, intron 1 of 2) 24169 NM_022337 23682 Hs.591975 NM_022337 ENSG00000123892 RAB38 NY-MEL-1|rrGTPbp RAB38, member RAS oncogene family protein-coding chr1-6043 chr1 81489756 81489966 + 12.0 0.000 intron (NM_001366008, intron 2 of 26) L1M4c|LINE|L1 67841 NR_125943 101927434 Hs.130394 NR_125943 ENSG00000234953 LOC101927434 - uncharacterized LOC101927434 ncRNA chr12-2595 chr12 120540546 120540756 + 12.0 0.000 intron (NM_014868, intron 1 of 16) intron (NM_014868, intron 1 of 16) 6295 NM_001330474 9921 Hs.442798 NM_014868 ENSG00000022840 RNF10 RIE2 ring finger protein 10 protein-coding chr19-1236 chr19 37691957 37692167 + 12.0 0.000 intron (NM_152605, intron 1 of 3) CpG 253 NM_152605 163115 Hs.722657 NM_152605 ENSG00000196381 ZNF781 - zinc finger protein 781 protein-coding chr16-4211 chr16 12470346 12470556 + 12.0 0.000 intron (NM_032167, intron 18 of 20) intron (NM_032167, intron 18 of 20) -249870 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr15-646 chr15 43330216 43330426 + 12.0 0.000 promoter-TSS (NM_001159280) promoter-TSS (NM_001159280) -30 NM_001324364 161823 Hs.533913 NM_001012969 ENSG00000168803 ADAL - adenosine deaminase like protein-coding chr10-2595 chr10 74282962 74283172 + 12.0 0.000 intron (NM_001369124, intron 3 of 9) intron (NM_001369124, intron 3 of 9) 106304 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr9-1700 chr9 98502718 98502928 + 12.0 0.000 intron (NM_005458, intron 3 of 18) intron (NM_005458, intron 3 of 18) 206112 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr21-1051 chr21 27860785 27860995 + 12.0 0.000 Intergenic Intergenic 138511 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr19-4157 chr19 37896785 37896995 + 12.0 0.000 intron (NM_031951, intron 2 of 5) AluSx3|SINE|Alu 9704 NM_031951 83889 Hs.664194 NM_031951 ENSG00000171804 WDR87 NYD-SP11 WD repeat domain 87 protein-coding chr10-4042 chr10 24449473 24449683 + 12.0 0.000 5' UTR (NM_001282769, exon 1 of 14) 5' UTR (NM_001282769, exon 1 of 14) 164 NM_001321681 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr13-1549 chr13 30154096 30154306 + 12.0 0.000 Intergenic Intergenic -1127 NR_138041 102157400 Hs.639879 NR_138041 LINC00384 - long intergenic non-protein coding RNA 384 ncRNA chr9-3364 chr9 120268939 120269149 + 12.0 0.000 Intergenic Intergenic -23994 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr1-9727 chr1 53454039 53454249 + 12.0 0.000 Intergenic Intergenic -5255 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr1-8944 chr1 8561108 8561318 + 12.0 0.000 intron (NM_001042681, intron 4 of 22) intron (NM_001042681, intron 4 of 22) -66300 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr12-5209 chr12 105683774 105683984 + 12.0 0.000 Intergenic HERVL-int|LTR|ERVL -20324 NR_110108 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr2-7168 chr2 203802801 203803011 + 12.0 0.000 Intergenic Intergenic -64865 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr3-7114 chr3 183287677 183287887 + 12.0 0.000 intron (NM_015078, intron 14 of 29) intron (NM_015078, intron 14 of 29) 34529 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr3-3645 chr3 124858434 124858644 + 12.0 0.000 intron (NM_001354766, intron 3 of 13) L1MB4|LINE|L1 28826 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr5-3433 chr5 153829698 153829908 + 12.0 0.000 Intergenic Intergenic 69184 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr11-1734 chr11 107858616 107858826 + 12.0 0.000 promoter-TSS (NM_017515) promoter-TSS (NM_017515) 66 NM_017515 54733 Hs.524014 NM_017515 ENSG00000110660 SLC35F2 HSNOV1 solute carrier family 35 member F2 protein-coding chr4-3219 chr4 40375094 40375304 + 12.0 0.000 Intergenic L2a|LINE|L2 39866 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chr12-5231 chr12 108236325 108236535 + 12.0 0.000 intron (NM_001304447, intron 8 of 9) (GAAT)n|Simple_repeat|Simple_repeat 84232 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr2-12675 chr2 75362747 75362957 + 12.0 0.000 Intergenic ERVL-E-int|LTR|ERVL -161216 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr5-1946 chr5 14676481 14676691 + 12.0 0.000 intron (NM_138348, intron 2 of 6) intron (NM_138348, intron 2 of 6) 11868 NM_138348 90268 Hs.406335 NM_138348 ENSG00000154124 OTULIN AIPDS|FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding chr1-8364 chr1 62936422 62936632 + 12.0 0.000 Intergenic MIRb|SINE|MIR 74398 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr18-688 chr18 79507675 79507885 + 12.0 0.000 intron (NM_001278673, intron 8 of 8) intron (NM_001278673, intron 8 of 8) -71502 NR_148949 284240 Hs.448912 NR_148949 LOC284240 - uncharacterized LOC284240 ncRNA chr2-8663 chr2 148798545 148798755 + 12.0 0.000 Intergenic L2b|LINE|L2 -76577 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr15-1740 chr15 47439527 47439737 + 12.0 0.000 intron (NM_001198999, intron 2 of 19) intron (NM_001198999, intron 2 of 19) 255543 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr3-4523 chr3 115560518 115560728 + 12.0 0.000 Intergenic L2a|LINE|L2 -62887 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr11-1971 chr11 11958777 11958987 + 12.0 0.000 3' UTR (NM_017944, exon 27 of 27) 3' UTR (NM_017944, exon 27 of 27) 49757 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr3-1315 chr3 14150571 14150781 + 12.0 0.000 intron (NM_001354726, intron 10 of 14) L2b|LINE|L2 25736 NM_024334 79188 Hs.517817 NM_024334 ENSG00000170876 TMEM43 ARVC5|ARVD5|EDMD7|LUMA transmembrane protein 43 protein-coding chr15-2153 chr15 76182755 76182965 + 12.0 0.000 intron (NM_152335, intron 8 of 10) MIRc|SINE|MIR -1374 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr10-3016 chr10 102268405 102268615 + 12.0 0.000 intron (NM_001199378, intron 3 of 39) intron (NM_001199378, intron 3 of 39) 22978 NM_001199379 8729 Hs.290243 NM_004193 ENSG00000107862 GBF1 ARF1GEF golgi brefeldin A resistant guanine nucleotide exchange factor 1 protein-coding chr15-1644 chr15 93784260 93784470 + 12.0 0.000 Intergenic L2c|LINE|L2 -72195 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr9-4692 chr9 125272983 125273193 + 12.0 0.000 intron (NR_148733, intron 2 of 26) intron (NR_148733, intron 2 of 26) 11262 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr2-2415 chr2 31489464 31489674 + 12.0 0.000 Intergenic L1PA6|LINE|L1 -74827 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr7-1941 chr7 55441702 55441912 + 12.0 0.000 Intergenic Intergenic 76359 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr11-10168 chr11 93686830 93687040 + 12.0 0.000 intron (NM_033395, intron 9 of 29) L4_A_Mam|LINE|RTE-X 25253 NM_033395 85459 Hs.458418 NM_033395 ENSG00000166004 CEP295 KIAA1731 centrosomal protein 295 protein-coding chr9-2766 chr9 107554883 107555093 + 12.0 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -65219 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr1-15955 chr1 191409152 191409362 + 12.0 0.000 Intergenic Intergenic -180759 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr22-802 chr22 22111081 22111291 + 12.0 0.000 Intergenic Intergenic -67252 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr13-1563 chr13 33052441 33052651 + 12.0 0.000 intron (NM_004795, intron 1 of 4) intron (NM_004795, intron 1 of 4) 36123 NM_004795 9365 Hs.524953 NM_004795 ENSG00000133116 KL HFTC3 klotho protein-coding chr8-3968 chr8 49843660 49843870 + 12.0 0.000 Intergenic Intergenic -66031 NM_001287813 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr8-1887 chr8 23289794 23290004 + 12.0 0.000 exon (NM_001136108, exon 4 of 8) exon (NM_001136108, exon 4 of 8) 1791 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr9-1037 chr9 132997561 132997771 + 12.0 0.000 Intergenic Intergenic 18972 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr8-1718 chr8 130491421 130491631 + 12.0 0.000 Intergenic Intergenic -47852 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr12-2064 chr12 121057418 121057628 + 12.0 0.000 Intergenic Intergenic -18281 NM_001261825 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr1-5817 chr1 215289896 215290106 + 12.0 0.000 Intergenic Intergenic 207264 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr21-1019 chr21 20233832 20234042 + 12.0 0.000 Intergenic L1MA5|LINE|L1 24748 NR_151724 111216285 Hs.561034 NR_151724 LINC02573 - long intergenic non-protein coding RNA 2573 ncRNA chr17-3911 chr17 55848524 55848734 + 12.0 0.000 Intergenic Intergenic 97524 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr7-1590 chr7 106485148 106485358 + 12.0 0.000 Intergenic Intergenic 175905 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr5-4331 chr5 157870520 157870730 + 12.0 0.000 Intergenic MER44D|DNA|TcMar-Tigger -11480 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr6-1335 chr6 33609461 33609671 + 12.0 0.000 Intergenic Intergenic -11756 NM_002224 3710 Hs.65758 NM_002224 ENSG00000096433 ITPR3 IP3R|IP3R3 inositol 1,4,5-trisphosphate receptor type 3 protein-coding chr12-4153 chr12 83619268 83619478 + 12.0 0.000 Intergenic L1M6|LINE|L1 932218 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr18-895 chr18 49212956 49213166 + 12.0 0.000 intron (NM_001353214, intron 13 of 17) intron (NM_001353214, intron 13 of 17) -163293 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr8-5922 chr8 18360108 18360318 + 12.0 0.000 Intergenic Intergenic -31069 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr1-6759 chr1 71378964 71379174 + 12.0 0.000 Intergenic SVA_B|Retroposon|SVA 297745 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr11-1052 chr11 47184775 47184985 + 12.0 0.000 intron (NM_016223, intron 1 of 10) intron (NM_016223, intron 1 of 10) 1001 NM_001184975 29763 Hs.334639 NM_016223 ENSG00000165912 PACSIN3 SDPIII protein kinase C and casein kinase substrate in neurons 3 protein-coding chr22-924 chr22 37534000 37534210 + 12.0 0.000 Intergenic L1MB7|LINE|L1 -14690 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr2-7415 chr2 9488091 9488301 + 12.0 0.000 TTS (NM_003183) TTS (NM_003183) 13141 NM_001320858 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr13-4111 chr13 80023465 80023675 + 12.0 0.000 intron (NR_104138, intron 1 of 1) MLT1J|LTR|ERVL-MaLR 12493 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr7-7500 chr7 101041322 101041532 + 12.0 0.000 non-coding (NR_133665, exon 3 of 12) non-coding (NR_133665, exon 3 of 12) 21346 NM_001040105 140453 Hs.271819 NM_001004430 ENSG00000169876 MUC17 MUC-17|MUC-3|MUC3 mucin 17, cell surface associated protein-coding chr10-3778 chr10 125375124 125375334 + 12.0 0.000 Intergenic Intergenic -199142 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr11-3751 chr11 40388514 40388724 + 12.0 0.000 intron (NM_020929, intron 2 of 4) intron (NM_020929, intron 2 of 4) -95489 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr15-2018 chr15 48482552 48482762 + 12.0 0.000 intron (NM_000138, intron 31 of 65) L1MEc|LINE|L1 150460 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr2-2037 chr2 121999479 121999689 + 12.0 0.000 Intergenic Intergenic 243933 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr10-5856 chr10 114240768 114240978 + 12.0 0.000 intron (NM_001320804, intron 1 of 13) intron (NM_001320804, intron 1 of 13) 1259 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr18-2001 chr18 41847590 41847800 + 12.0 0.000 Intergenic Intergenic -107539 NM_001308020 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chrX-1146 chrX 39527080 39527290 + 12.0 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -134031 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr2-2593 chr2 240878365 240878575 + 12.0 0.000 intron (NM_000030, intron 10 of 10) intron (NM_000030, intron 10 of 10) 9646 NM_000030 189 Hs.144567 NM_000030 ENSG00000172482 AGXT AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6 alanine--glyoxylate and serine--pyruvate aminotransferase protein-coding chr17-1891 chr17 58417502 58417712 + 12.0 0.000 promoter-TSS (NM_017763) promoter-TSS (NM_017763) -25 NM_017763 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr8-4364 chr8 101775860 101776070 + 12.0 0.000 intron (NM_001040625, intron 4 of 6) intron (NM_001040625, intron 4 of 6) 15004 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr12-4092 chr12 56121956 56122166 + 12.0 0.000 3' UTR (NM_001303124, exon 3 of 3) 3' UTR (NM_001303124, exon 3 of 3) 3644 NM_001303125 84872 Hs.632706 NM_032786 ENSG00000135482 ZC3H10 ZC3HDC10 zinc finger CCCH-type containing 10 protein-coding chr16-907 chr16 46973752 46973962 + 12.0 0.000 promoter-TSS (NM_005880) promoter-TSS (NM_005880) -183 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr2-2608 chr2 32062565 32062775 + 12.0 0.000 promoter-TSS (NM_199436) promoter-TSS (NM_199436) -941 NM_001363875 6683 Hs.468091 NM_014946 ENSG00000021574 SPAST ADPSP|FSP2|SPG4 spastin protein-coding chr10-3200 chr10 98023407 98023617 + 12.0 0.000 intron (NM_001206528, intron 1 of 14) intron (NM_001206528, intron 1 of 14) 7109 NM_018058 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr6-3650 chr6 136407487 136407697 + 12.0 0.000 intron (NM_001198611, intron 3 of 16) intron (NM_001198611, intron 3 of 16) 59283 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr2-5533 chr2 158644153 158644363 + 12.0 0.000 intron (NM_001005476, intron 11 of 20) intron (NM_001005476, intron 11 of 20) 90744 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr1-3584 chr1 7471698 7471908 + 12.0 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -82049 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr1-4199 chr1 70034524 70034734 + 12.0 0.000 intron (NM_001370785, intron 18 of 26) MIR3|SINE|MIR 115307 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chr1-2544 chr1 8902873 8903083 + 12.0 0.000 Intergenic MER21A|LTR|ERVL 24143 NR_038351 100505975 Hs.429843 NR_038351 ENSG00000230679 ENO1-AS1 - ENO1 antisense RNA 1 ncRNA chr4-2107 chr4 53479117 53479327 + 12.0 0.000 intron (NM_001126328, intron 7 of 10) intron (NM_001126328, intron 7 of 10) -20855 NR_046622 100873939 Hs.662372 NR_046622 ENSG00000250930 LNX1-AS1 - LNX1 antisense RNA 1 ncRNA chr15-2178 chr15 82895204 82895414 + 12.0 0.000 intron (NM_004839, intron 1 of 8) intron (NM_004839, intron 1 of 8) 57411 NM_199330 9455 Hs.578443 NM_004839 ENSG00000103942 HOMER2 ACPD|CPD|DFNA68|HOMER-2|VESL-2 homer scaffold protein 2 protein-coding chr8-3777 chr8 25144367 25144577 + 12.0 0.000 Intergenic Intergenic -40217 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr1-6841 chr1 100531287 100531497 + 12.0 0.000 Intergenic Intergenic -6747 NM_022049 54112 Hs.170053 NM_022049 ENSG00000181656 GPR88 COCPMR|STRG G protein-coupled receptor 88 protein-coding chr11-4904 chr11 62112480 62112690 + 12.0 0.000 Intergenic Intergenic -11426 NM_020238 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr10-5868 chr10 115510509 115510719 + 12.0 0.000 intron (NM_207303, intron 24 of 28) Tigger1|DNA|TcMar-Tigger 417249 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr18-1869 chr18 25876809 25877019 + 12.0 0.000 Intergenic Intergenic 213699 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr17-4663 chr17 19316922 19317132 + 12.0 0.000 intron (NM_014964, intron 7 of 10) intron (NM_014964, intron 7 of 10) -10766 NR_048576 100874018 Hs.621672 NR_048576 ENSG00000235397 EPN2-AS1 - EPN2 antisense RNA 1 ncRNA chr4-2532 chr4 53705396 53705606 + 12.0 0.000 intron (NR_125918, intron 1 of 2) LTR79|LTR|ERVL 9600 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr2-3817 chr2 25229614 25229824 + 12.0 0.000 non-coding (NR_135490, exon 24 of 24) non-coding (NR_135490, exon 24 of 24) 22412 NM_001320893 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr1-5203 chr1 179034459 179034669 + 12.0 0.000 intron (NM_001324311, intron 1 of 7) intron (NM_001324311, intron 1 of 7) 8440 NM_001324311 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr2-8169 chr2 85908135 85908345 + 12.0 0.000 Intergenic Intergenic 18960 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr1-5263 chr1 204295720 204295930 + 12.0 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 64104 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr8-4626 chr8 132891209 132891419 + 12.0 0.000 intron (NM_003235, intron 10 of 47) L2b|LINE|L2 24356 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr3-1851 chr3 104510462 104510672 + 12.0 0.000 Intergenic Intergenic -856146 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr3-3163 chr3 172685432 172685642 + 12.0 0.000 intron (NM_001146276, intron 1 of 4) MIR3|SINE|MIR 25530 NM_001146276 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr10-1173 chr10 43595936 43596146 + 12.0 0.000 Intergenic HERV3-int|LTR|ERV1 -10366 NM_001318142 220992 Hs.147440 NM_145312 ENSG00000198298 ZNF485 - zinc finger protein 485 protein-coding chr6-1351 chr6 43113665 43113875 + 12.0 0.000 intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) 36956 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr10-2222 chr10 71501549 71501759 + 12.0 0.000 intron (NM_052836, intron 3 of 12) intron (NM_052836, intron 3 of 12) 10266 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr6-2396 chr6 148509819 148510029 + 12.0 0.000 intron (NM_001346509, intron 1 of 12) intron (NM_001346509, intron 1 of 12) 773 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr15-1097 chr15 66516025 66516235 + 12.0 0.000 intron (NM_001287823, intron 3 of 17) MER20B|DNA|hAT-Charlie 10804 NM_001287823 55055 Hs.21331 NM_017975 ENSG00000174442 ZWILCH KNTC1AP|hZwilch zwilch kinetochore protein protein-coding chr3-1932 chr3 193768090 193768300 + 12.0 0.000 Intergenic Intergenic 75814 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr15-1241 chr15 72155479 72155689 + 12.0 0.000 Intergenic Intergenic 37181 NM_001172111 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr12-2536 chr12 100141616 100141826 + 12.0 0.000 intron (NM_001006947, intron 1 of 12) intron (NM_001006947, intron 1 of 12) 1153 NM_015054 23074 Hs.572154 NM_015054 ENSG00000111647 UHRF1BP1L SHIP164 UHRF1 binding protein 1 like protein-coding chr2-3686 chr2 201839790 201840000 + 12.0 0.000 intron (NM_001366386, intron 8 of 13) L1MEd|LINE|L1 33316 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding KI270750.1-1 KI270750.1 27242 27452 + 12.0 0.000 NA NA NA NA chr2-4036 chr2 109037041 109037251 + 12.0 0.000 Intergenic AluSz|SINE|Alu -47926 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr10-5847 chr10 113584340 113584550 + 12.0 0.000 intron (NM_001177660, intron 11 of 12) L2b|LINE|L2 31392 NM_004132 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr12-1743 chr12 54383070 54383280 + 12.0 0.000 intron (NM_015481, intron 1 of 6) (AAAAC)n|Simple_repeat|Simple_repeat 1558 NM_001290001 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chrX-939 chrX 43616717 43616927 + 12.0 0.000 Intergenic Intergenic -38085 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr6-5321 chr6 143806235 143806445 + 12.0 0.000 intron (NM_001100165, intron 10 of 11) intron (NM_001100165, intron 10 of 11) -36933 NM_001329953 84946 Hs.185675 NM_032860 ENSG00000135521 LTV1 C6orf93|dJ468K18.4 LTV1 ribosome biogenesis factor protein-coding chr5-4743 chr5 50753299 50753509 + 12.0 0.000 intron (NM_024615, intron 3 of 25) intron (NM_024615, intron 3 of 25) 85990 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr8-1276 chr8 22863724 22863934 + 12.0 0.000 intron (NM_001363233, intron 3 of 6) intron (NM_001363233, intron 3 of 6) -14143 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr20-2392 chr20 18380938 18381148 + 12.0 0.000 non-coding (NR_034167, exon 2 of 2) non-coding (NR_034167, exon 2 of 2) 1994 NR_034167 440757 Hs.120399 NM_001004344 ENSG00000237282 LINC00851 DZANK1-AS1 long intergenic non-protein coding RNA 851 ncRNA chr2-4320 chr2 237435987 237436197 + 12.0 0.000 Intergenic Intergenic -21885 NM_057167 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr16-3134 chr16 72931132 72931342 + 12.0 0.000 intron (NM_001164766, intron 2 of 8) intron (NM_001164766, intron 2 of 8) 116891 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr10-2207 chr10 43257560 43257770 + 12.0 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) 9400 NM_145313 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr18-1294 chr18 63099394 63099604 + 12.0 0.000 Intergenic MamTip1|DNA|hAT-Tip100 219881 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr3-4131 chr3 117962831 117963041 + 12.0 0.000 Intergenic Intergenic -272011 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr11-2818 chr11 123021085 123021295 + 12.0 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 3624 NR_027288 341056 Hs.620309 NR_027288 LOC341056 - SUMO1 activating enzyme subunit 1 pseudogene pseudo chr18-3498 chr18 73535938 73536148 + 12.0 0.000 Intergenic L1MDb|LINE|L1 211102 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr10-2943 chr10 29482888 29483098 + 12.0 0.000 non-coding (NR_110920, exon 4 of 4) non-coding (NR_110920, exon 4 of 4) 62104 NR_030335 693189 NR_030335 ENSG00000207612 MIR604 MIRN604|hsa-mir-604 microRNA 604 ncRNA chrX-2383 chrX 69614246 69614456 + 12.0 0.000 Intergenic MIR1_Amn|SINE|MIR -1762 NM_001005609 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr4-1643 chr4 94457795 94458005 + 12.0 0.000 TTS (NM_001256429) TTS (NM_001256429) 5958 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr7-2321 chr7 106176844 106177054 + 12.0 0.000 Intergenic Intergenic -64373 NM_006754 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr8-3140 chr8 69681529 69681739 + 12.0 0.000 intron (NM_001146009, intron 5 of 7) intron (NM_001146009, intron 5 of 7) 88734 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr10-2239 chr10 89285386 89285596 + 12.0 0.000 Intergenic HERVH-int|LTR|ERV1 -16555 NM_001547 3433 Hs.437609 NM_001547 ENSG00000119922 IFIT2 G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 interferon induced protein with tetratricopeptide repeats 2 protein-coding chr14-3299 chr14 85063335 85063545 + 12.0 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -208492 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr17-1726 chr17 75615050 75615260 + 12.0 0.000 intron (NM_001309242, intron 32 of 62) intron (NM_001309242, intron 32 of 62) -18279 NM_001162995 643008 Hs.528605 NM_001162995 ENSG00000204323 SMIM5 C17orf109|PP12104 small integral membrane protein 5 protein-coding chr1-2987 chr1 183411181 183411391 + 12.0 0.000 intron (NM_015039, intron 1 of 10) intron (NM_015039, intron 1 of 10) 7094 NM_015039 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr1-10430 chr1 158578601 158578811 + 12.0 0.000 TTS (NM_001004477) TTS (NM_001004477) 1193 NM_001004477 128367 Hs.553589 NM_001004477 ENSG00000279111 OR10X1 OR1-13|OR1-14|OR10X1P olfactory receptor family 10 subfamily X member 1 (gene/pseudogene) protein-coding chr21-274 chr21 41460713 41460923 + 12.0 0.000 Intergenic Intergenic 28768 NM_001282920 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding chr5-3299 chr5 121138391 121138601 + 12.0 0.000 Intergenic Intergenic -184054 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr4-2606 chr4 134394815 134395025 + 12.0 0.000 Intergenic L1M2|LINE|L1 -28948 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr4-1265 chr4 33716124 33716334 + 12.0 0.000 Intergenic Intergenic 323664 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr12-689 chr12 114303330 114303540 + 12.0 0.000 Intergenic AluJb|SINE|Alu -61665 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr2-9175 chr2 214244763 214244973 + 12.0 0.000 intron (NR_047660, intron 14 of 14) intron (NR_047660, intron 14 of 14) -166186 NM_001080500 402117 Hs.534834 NM_001080500 ENSG00000174453 VWC2L - von Willebrand factor C domain containing 2 like protein-coding chr17-4430 chr17 42562009 42562219 + 12.0 0.000 promoter-TSS (NM_001042529) promoter-TSS (NM_001042529) -34 NM_001042532 80347 Hs.296422 NM_025233 ENSG00000068120 COASY DPCK|NBIA6|NBP|PCH12|PPAT|UKR1|pOV-2 Coenzyme A synthase protein-coding chr18-801 chr18 62445150 62445360 + 12.0 0.000 Intergenic Intergenic -77770 NM_017742 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr6-2729 chr6 73508850 73509060 + 12.0 0.000 3' UTR (NM_012123, exon 12 of 12) 3' UTR (NM_012123, exon 12 of 12) 9483 NR_132981 106635684 NR_132981 SNORD141B - small nucleolar RNA, C/D box 141B snoRNA chr1-5409 chr1 16374161 16374371 + 12.0 0.000 intron (NR_073500, intron 1 of 1) intron (NR_073500, intron 1 of 1) 7024 NR_073501 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr7-3784 chr7 85226592 85226802 + 12.0 0.000 Intergenic Intergenic -104766 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr1-5672 chr1 39098524 39098734 + 12.0 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 14462 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr7-2600 chr7 139516497 139516707 + 12.0 0.000 Intergenic MamGypLTR1a|LTR|Gypsy -7083 NM_001080511 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr18-2275 chr18 75728857 75729067 + 12.0 0.000 Intergenic Intergenic -16559 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chr10-2103 chr10 125017609 125017819 + 12.0 0.000 intron (NM_001290214, intron 3 of 10) intron (NM_001290214, intron 3 of 10) 10357 NM_022802 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr2-5789 chr2 227766253 227766463 + 12.0 0.000 Intergenic MIR|SINE|MIR -47484 NM_001130046 6364 Hs.75498 NM_004591 ENSG00000115009 CCL20 CKb4|Exodus|LARC|MIP-3-alpha|MIP-3a|MIP3A|SCYA20|ST38 C-C motif chemokine ligand 20 protein-coding chr3-6825 chr3 147402317 147402527 + 12.0 0.000 intron (NM_001168379, intron 2 of 4) intron (NM_001168379, intron 2 of 4) 1862 NM_001168378 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chr11-5341 chr11 62349888 62350098 + 12.0 0.000 intron (NM_025080, intron 2 of 6) MER41A|LTR|ERV1 12545 NM_001083926 80150 Hs.535326 NM_025080 ENSG00000162174 ASRGL1 ALP|ALP1|CRASH asparaginase like 1 protein-coding chr10-1760 chr10 30170935 30171145 + 12.0 0.000 Intergenic Intergenic -40812 NR_120653 101929279 Hs.559153 NR_120653 LOC101929279 - uncharacterized LOC101929279 ncRNA chr5-5577 chr5 149871978 149872188 + 12.0 0.000 intron (NM_000440, intron 17 of 21) intron (NM_000440, intron 17 of 21) 60894 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr1-7300 chr1 244391782 244391992 + 12.0 0.000 Intergenic ERVL-int|LTR|ERVL 39252 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr13-1173 chr13 38657303 38657513 + 12.0 0.000 intron (NR_126377, intron 2 of 2) intron (NR_126377, intron 2 of 2) 29267 NR_126377 101929121 Hs.618449 NR_126377 LINC00437 TCONS_00021639 long intergenic non-protein coding RNA 437 ncRNA chr6-2347 chr6 129140726 129140936 + 12.0 0.000 intron (NM_000426, intron 4 of 64) intron (NM_000426, intron 4 of 64) 257690 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr16-3110 chr16 68802362 68802572 + 12.0 0.000 intron (NM_001317185, intron 3 of 15) AluSx1|SINE|Alu -41064 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr10-1618 chr10 70679743 70679953 + 12.0 0.000 intron (NM_080722, intron 2 of 21) intron (NM_080722, intron 2 of 21) 7342 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr9-6156 chr9 69535768 69535978 + 12.0 0.000 intron (NM_001163, intron 1 of 12) HAL1ME|LINE|L1 136498 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr3-3147 chr3 165156507 165156717 + 12.0 0.000 Intergenic Intergenic 39772 NM_001318810 22865 Hs.101745 NM_014926 ENSG00000121871 SLITRK3 - SLIT and NTRK like family member 3 protein-coding chr11-6154 chr11 43551323 43551533 + 12.0 0.000 Intergenic L2a|LINE|L2 -8228 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA chr6-619 chr6 17505731 17505941 + 12.0 0.000 intron (NR_110855, intron 2 of 3) intron (NR_110855, intron 2 of 3) 5429 NR_110855 101928491 Hs.622876 NR_110855 LOC101928491 - uncharacterized LOC101928491 ncRNA chr4-2736 chr4 7107833 7108043 + 12.0 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -4562 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr13-1373 chr13 97256272 97256482 + 12.0 0.000 intron (NM_144778, intron 1 of 8) intron (NM_144778, intron 1 of 8) 34044 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr3-2113 chr3 52851490 52851700 + 12.0 0.000 intron (NM_001198974, intron 3 of 9) intron (NM_001198974, intron 3 of 9) -5043 NR_107031 102465866 NR_107031 ENSG00000275789 MIR8064 hsa-mir-8064 microRNA 8064 ncRNA chr11-2854 chr11 8765277 8765487 + 12.0 0.000 intron (NM_005418, intron 4 of 22) MER119|DNA|hAT-Charlie -3396 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr8-1744 chr8 23327204 23327414 + 12.0 0.000 intron (NM_002318, intron 6 of 13) intron (NM_002318, intron 6 of 13) -8899 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr18-906 chr18 58214225 58214435 + 12.0 0.000 intron (NM_001144970, intron 1 of 28) intron (NM_001144970, intron 1 of 28) -7241 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr14-3327 chr14 88802653 88802863 + 12.0 0.000 Intergenic MER1A|DNA|hAT-Charlie -9805 NM_183387 161436 Hs.325846 NM_183387 ENSG00000165521 EML5 EMAP-2|EMAP-5 EMAP like 5 protein-coding chr2-9003 chr2 195125937 195126147 + 12.0 0.000 Intergenic MER52A|LTR|ERV1 395447 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr18-884 chr18 46667380 46667590 + 12.0 0.000 TTS (NM_001307986) TTS (NM_001307986) -10452 NM_144612 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr2-8787 chr2 166641910 166642120 + 12.0 0.000 Intergenic Intergenic -155044 NR_045628 6332 Hs.596087 NM_002976 ENSG00000136546 SCN7A NaG|Nav2.1|Nav2.2|SCN6A sodium voltage-gated channel alpha subunit 7 protein-coding chr11-3354 chr11 121754635 121754845 + 12.0 0.000 Intergenic Intergenic 302426 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr13-1045 chr13 97422221 97422431 + 12.0 0.000 Intergenic Intergenic -11843 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr17-2742 chr17 79042572 79042782 + 12.0 0.000 intron (NM_198593, intron 1 of 3) intron (NM_198593, intron 1 of 3) 8378 NM_198593 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and TNF related 1 protein-coding chr2-4009 chr2 98275996 98276206 + 12.0 0.000 intron (NM_001345864, intron 16 of 21) intron (NM_001345864, intron 16 of 21) -70054 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr4-2639 chr4 162201821 162202031 + 12.0 0.000 Intergenic L2|LINE|L2 -37892 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr3-3644 chr3 124402044 124402254 + 12.0 0.000 intron (NM_001024660, intron 13 of 59) intron (NM_001024660, intron 13 of 59) 27817 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr22-844 chr22 45879183 45879393 + 12.0 0.000 Intergenic Intergenic 97874 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr6-877 chr6 73695865 73696075 + 12.0 0.000 promoter-TSS (NM_133493) promoter-TSS (NM_133493) -115 NM_001159587 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr2-3263 chr2 241613455 241613665 + 12.0 0.000 intron (NM_015963, intron 2 of 5) AluJb|SINE|Alu 3941 NM_001164356 51078 Hs.435759 NM_015963 ENSG00000176946 THAP4 CGI-36|Nb(III)|PP238 THAP domain containing 4 protein-coding chr5-2359 chr5 79123079 79123289 + 12.0 0.000 intron (NM_001713, intron 5 of 7) L2-3_Crp|LINE|L2 11375 NM_001713 635 Hs.80756 NM_001713 ENSG00000145692 BHMT BHMT1|HEL-S-61p betaine--homocysteine S-methyltransferase protein-coding chr14-3413 chr14 96015776 96015986 + 12.0 0.000 Intergenic L1ME1|LINE|L1 -23443 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr4-1323 chr4 144646894 144647104 + 12.0 0.000 promoter-TSS (NR_037595) promoter-TSS (NR_037595) 843 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr4-4079 chr4 3806016 3806226 + 12.0 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 39736 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr1-2323 chr1 162696517 162696727 + 12.0 0.000 intron (NM_006182, intron 2 of 17) intron (NM_006182, intron 2 of 17) 64158 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr9-8279 chr9 112854645 112854855 + 12.0 0.000 intron (NM_001012994, intron 7 of 8) MIRb|SINE|MIR 36126 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr17-3978 chr17 65348912 65349122 + 12.0 0.000 Intergenic Intergenic -108524 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr2-8748 chr2 161466691 161466901 + 12.0 0.000 Intergenic L1MEf|LINE|L1 41106 NR_077058 285116 Hs.470435 NR_077058 AHCTF1P1 AHCTF1P|ELYS-like AT-hook containing transcription factor 1 pseudogene 1 pseudo chr15-2520 chr15 40320985 40321195 + 12.0 0.000 Intergenic MER135|DNA|DNA -2602 NM_001301268 100505573 Hs.530791 NM_001301268 ENSG00000259330 INAFM2 LINC00984|OGU1 InaF motif containing 2 protein-coding chr8-2969 chr8 71264260 71264470 + 12.0 0.000 intron (NM_001370335, intron 14 of 20) intron (NM_001370335, intron 14 of 20) 92341 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr7-2139 chr7 43674594 43674804 + 12.0 0.000 intron (NR_163914, intron 1 of 8) intron (NR_163914, intron 1 of 8) 54824 NM_001371307 chr1-5983 chr1 41608391 41608601 + 12.0 0.000 intron (NM_024503, intron 3 of 8) intron (NM_024503, intron 3 of 8) -123813 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr10-3301 chr10 821662 821872 + 12.0 0.000 intron (NM_001351277, intron 13 of 17) ERVL-E-int|LTR|ERVL 109938 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr10-5208 chr10 61691190 61691400 + 12.0 0.000 intron (NM_173554, intron 4 of 6) intron (NM_173554, intron 4 of 6) 28334 NM_173554 219621 Hs.673160 NM_173554 ENSG00000183346 CABCOCO1 C10orf107 ciliary associated calcium binding coiled-coil 1 protein-coding chr20-893 chr20 36465439 36465649 + 12.0 0.000 intron (NM_183006, intron 1 of 6) intron (NM_183006, intron 1 of 6) 3749 NM_183006 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr8-668 chr8 54135085 54135295 + 12.0 0.000 promoter-TSS (NM_014175) promoter-TSS (NM_014175) -51 NM_014175 29088 Hs.18349 NM_014175 ENSG00000137547 MRPL15 HSPC145|L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding chr20-968 chr20 39897058 39897268 + 12.0 0.000 Intergenic Intergenic -107298 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr19-2653 chr19 8362007 8362217 + 12.0 0.000 Intergenic Intergenic -2043 NR_104213 51129 Hs.9613 NM_016109 ENSG00000167772 ANGPTL4 ARP4|FIAF|HARP|HFARP|NL2|PGAR|TGQTL|UNQ171|pp1158 angiopoietin like 4 protein-coding chr3-9563 chr3 53670125 53670335 + 12.0 0.000 intron (NM_000720, intron 7 of 48) intron (NM_000720, intron 7 of 48) 175619 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr18-715 chr18 12006136 12006346 + 12.0 0.000 intron (NM_014214, intron 2 of 7) intron (NM_014214, intron 2 of 7) 24734 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr11-4434 chr11 94574640 94574850 + 12.0 0.000 non-coding (NR_135096, exon 7 of 7) non-coding (NR_135096, exon 7 of 7) 7377 NM_152431 143689 Hs.660188 NM_152431 ENSG00000134627 PIWIL4 HIWI2|MIWI2 piwi like RNA-mediated gene silencing 4 protein-coding chr17-3844 chr17 43974307 43974517 + 12.0 0.000 intron (NM_004160, intron 1 of 6) intron (NM_004160, intron 1 of 6) 30057 NM_004160 5697 Hs.169249 NM_004160 ENSG00000131096 PYY PYY-I|PYY1 peptide YY protein-coding chr11-3279 chr11 79414157 79414367 + 12.0 0.000 intron (NM_001098816, intron 1 of 33) intron (NM_001098816, intron 1 of 33) 7964 NR_049841 100847000 NR_049841 ENSG00000266570 MIR5579 - microRNA 5579 ncRNA chr8-1723 chr8 137148884 137149094 + 12.0 0.000 Intergenic Intergenic 264599 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr10-3120 chr10 34907975 34908185 + 12.0 0.000 Intergenic MIRb|SINE|MIR 92312 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr1-2967 chr1 150619844 150620054 + 12.0 0.000 Intergenic Intergenic 9184 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr1-5225 chr1 193211635 193211845 + 12.0 0.000 intron (NM_024529, intron 11 of 16) MER44C|DNA|TcMar-Tigger -25127 NM_003783 8707 Hs.518834 NM_003783 ENSG00000162630 B3GALT2 BETA3GALT2|GLCT2|beta3Gal-T2 beta-1,3-galactosyltransferase 2 protein-coding chr7-2693 chr7 22842003 22842213 + 12.0 0.000 Intergenic LTR81|LTR|Gypsy -12132 NR_146320 109729180 Hs.553139 NR_146320 SNHG26 - small nucleolar RNA host gene 26 ncRNA chr7-2199 chr7 100604629 100604839 + 12.0 0.000 promoter-TSS (NR_038910) promoter-TSS (NR_038910) -696 NR_038910 100129845 Hs.714123 NR_038910 ENSG00000224729 PCOLCE-AS1 - PCOLCE antisense RNA 1 ncRNA chr2-12627 chr2 72793993 72794203 + 12.0 0.000 intron (NR_135774, intron 1 of 19) intron (NR_135774, intron 1 of 19) 31935 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr1-4340 chr1 64933302 64933512 + 12.0 0.000 intron (NM_001321852, intron 1 of 24) intron (NM_001321852, intron 1 of 24) 33142 NM_002227 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr9-3070 chr9 137499286 137499496 + 12.0 0.000 intron (NM_001098537, intron 16 of 34) intron (NM_001098537, intron 16 of 34) -40057 NM_015537 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr1-9454 chr1 35085605 35085815 + 12.0 0.000 intron (NM_001319955, intron 1 of 8) intron (NM_001319955, intron 1 of 8) 6325 NM_024772 79830 Hs.471243 NM_024772 ENSG00000197056 ZMYM1 MYM zinc finger MYM-type containing 1 protein-coding chr19-2664 chr19 10923391 10923601 + 12.0 0.000 TTS (NM_199141) TTS (NM_199141) 5143 NM_001321439 78992 Hs.164026 NM_024029 ENSG00000130733 YIPF2 FinGER2 Yip1 domain family member 2 protein-coding chr20-1264 chr20 43937928 43938138 + 12.0 0.000 intron (NM_001098796, intron 1 of 8) intron (NM_001098796, intron 1 of 8) -7863 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr13-1685 chr13 77019735 77019945 + 12.0 0.000 intron (NM_012158, intron 2 of 4) intron (NM_012158, intron 2 of 4) 7319 NM_012158 26224 Hs.508284 NM_012158 ENSG00000005812 FBXL3 FBL3|FBL3A|FBXL3A|IDDSFAS F-box and leucine rich repeat protein 3 protein-coding chr10-3094 chr10 18312814 18313024 + 12.0 0.000 intron (NM_000724, intron 1 of 12) intron (NM_000724, intron 1 of 12) -27790 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr2-4078 chr2 129397308 129397518 + 12.0 0.000 Intergenic Intergenic -123522 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr11-1852 chr11 95680740 95680950 + 12.0 0.000 Intergenic Intergenic 108937 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr14-696 chr14 34873594 34873804 + 12.0 0.000 promoter-TSS (NR_160776) promoter-TSS (NR_160776) -492 NR_160776 112268124 Hs.509140 NR_160776 LOC112268124 - uncharacterized LOC112268124 ncRNA chr7-1145 chr7 76806000 76806210 + 12.0 0.000 Intergenic Intergenic -174717 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr10-1967 chr10 30605829 30606039 + 12.0 0.000 Intergenic Intergenic 23819 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr11-7777 chr11 88650402 88650612 + 12.0 0.000 intron (NM_001143831, intron 3 of 8) L1MEg|LINE|L1 145931 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr6-3100 chr6 90376248 90376458 + 12.0 0.000 Intergenic Intergenic 63611 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chrX-458 chrX 139891339 139891549 + 12.0 0.000 intron (NM_001353812, intron 1 of 29) intron (NM_001353812, intron 1 of 29) 32787 NR_030230 574508 NR_030230 ENSG00000207633 MIR505 MIRN505|hsa-mir-505|mir-505 microRNA 505 ncRNA chr5-697 chr5 34838960 34839170 + 12.0 0.000 promoter-TSS (NM_144725) promoter-TSS (NM_144725) -99 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding chr1-3831 chr1 25128558 25128768 + 12.0 0.000 Intergenic Intergenic 103839 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr9-3656 chr9 95116966 95117176 + 12.0 0.000 intron (NM_001243744, intron 11 of 13) intron (NM_001243744, intron 11 of 13) -30977 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr11-1608 chr11 45859852 45860062 + 12.0 0.000 intron (NM_001127457, intron 3 of 11) (CAGAGG)n|Simple_repeat|Simple_repeat 12482 NM_021117 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr1-10742 chr1 198334394 198334604 + 12.0 0.000 Intergenic MER20|DNA|hAT-Charlie 177501 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr12-2660 chr12 28148012 28148222 + 12.0 0.000 Intergenic Intergenic -42339 NM_001352083 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding chr20-669 chr20 17895228 17895438 + 12.0 0.000 Intergenic Intergenic 67613 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr17-4277 chr17 68169153 68169363 + 12.0 0.000 Intergenic LTR12C|LTR|ERV1 -29402 NR_027283 440461 Hs.661522 NR_027283 ARHGAP27P2 - Rho GTPase activating protein 27 pseudogene 2 pseudo chr11-5545 chr11 95521112 95521322 + 12.0 0.000 Intergenic Intergenic 268565 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr16-3056 chr16 56705401 56705611 + 12.0 0.000 Intergenic Intergenic 23036 NM_005952 4501 Hs.374950 NM_005952 ENSG00000187193 MT1X MT-1l|MT1 metallothionein 1X protein-coding chr16-1594 chr16 10168265 10168475 + 12.0 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 13697 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr5-2439 chr5 128105297 128105507 + 12.0 0.000 intron (NM_001046, intron 1 of 26) L2a|LINE|L2 21636 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr11-3071 chr11 12703121 12703331 + 12.0 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 28805 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr9-5537 chr9 108521142 108521352 + 12.0 0.000 Intergenic Intergenic 334739 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr22-971 chr22 25003979 25004189 + 12.0 0.000 Intergenic AluSx3|SINE|Alu -23890 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding chr2-1327 chr2 69149977 69150187 + 12.0 0.000 intron (NM_032208, intron 12 of 17) intron (NM_032208, intron 12 of 17) 46400 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr12-1721 chr12 27284848 27285058 + 12.0 0.000 intron (NM_015000, intron 1 of 13) intron (NM_015000, intron 1 of 13) 40667 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr5-7351 chr5 17961119 17961329 + 12.0 0.000 Intergenic MER70A|LTR|ERVL 153950 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr20-3458 chr20 52047974 52048184 + 12.0 0.000 Intergenic Intergenic 57405 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr16-3955 chr16 87426504 87426714 + 12.0 0.000 intron (NM_015144, intron 3 of 12) intron (NM_015144, intron 3 of 12) 34273 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr19-3185 chr19 46352290 46352500 + 12.0 0.000 intron (NM_001204284, intron 1 of 11) MIRb|SINE|MIR 5308 NM_006247 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr8-6695 chr8 83014534 83014744 + 12.0 0.000 Intergenic (CTATT)n|Simple_repeat|Simple_repeat 102535 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr14-2142 chr14 80621701 80621911 + 12.0 0.000 intron (NM_152446, intron 19 of 24) intron (NM_152446, intron 19 of 24) 319932 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr2-2606 chr2 26462587 26462797 + 12.0 0.000 intron (NM_194322, intron 23 of 28) intron (NM_194322, intron 23 of 28) 15432 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr12-1769 chr12 89225897 89226107 + 12.0 0.000 Intergenic Intergenic 126499 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr2-1854 chr2 231677870 231678080 + 12.0 0.000 Intergenic Intergenic -30550 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr2-7877 chr2 53129952 53130162 + 12.0 0.000 Intergenic Intergenic -427442 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr12-2507 chr12 85823873 85824083 + 12.0 0.000 intron (NM_005447, intron 1 of 1) L2c|LINE|L2 12431 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr5-5349 chr5 131564249 131564459 + 12.0 0.000 intron (NM_016340, intron 4 of 27) intron (NM_016340, intron 4 of 27) 70875 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr17-5526 chr17 43015026 43015236 + 12.0 0.000 TTS (NM_001330230) TTS (NM_001330230) 7254 NM_006373 10493 Hs.514199 NM_006373 ENSG00000108828 VAT1 VATI vesicle amine transport 1 protein-coding chr4-2148 chr4 81137400 81137610 + 12.0 0.000 intron (NM_006259, intron 12 of 18) intron (NM_006259, intron 12 of 18) 16652 NM_001282480 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding chr8-2088 chr8 132835254 132835464 + 12.0 0.000 intron (NM_001277196, intron 14 of 19) intron (NM_001277196, intron 14 of 19) -31599 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr1-2080 chr1 42957975 42958185 + 12.0 0.000 promoter-TSS (NR_033967) promoter-TSS (NR_033967) 788 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr20-1538 chr20 51397268 51397478 + 12.0 0.000 intron (NM_001258295, intron 9 of 9) intron (NM_001258295, intron 9 of 9) 55604 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr2-4274 chr2 230974258 230974468 + 12.0 0.000 Intergenic Intergenic 21669 NR_033879 348761 Hs.404807 NR_033879 ENSG00000238062 SPATA3-AS1 - SPATA3 antisense RNA 1 (head to head) ncRNA chr5-3769 chr5 61881759 61881969 + 12.0 0.000 Intergenic Intergenic -146166 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr10-1107 chr10 91887281 91887491 + 12.0 0.000 Intergenic CpG 22100 NM_152429 143282 Hs.466120 NM_152429 ENSG00000174721 FGFBP3 C10orf13|FGF-BP3 fibroblast growth factor binding protein 3 protein-coding chr8-1228 chr8 118113001 118113211 + 12.0 0.000 Intergenic Intergenic -1287 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr9-2636 chr9 25458164 25458374 + 12.0 0.000 Intergenic MER63D|DNA|hAT-Blackjack 220589 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr2-5021 chr2 231179991 231180201 + 12.0 0.000 Intergenic Intergenic -18535 NM_001271466 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr11-4102 chr11 33877846 33878056 + 12.0 0.000 intron (NM_005574, intron 2 of 5) intron (NM_005574, intron 2 of 5) -8073 NM_001142315 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr10-3915 chr10 72206056 72206266 + 12.0 0.000 intron (NM_001198799, intron 3 of 12) AluSp|SINE|Alu 9795 NM_001369088 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr6-2805 chr6 151015176 151015386 + 12.0 0.000 intron (NM_001350486, intron 23 of 27) intron (NM_001350486, intron 23 of 27) 8273 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr19-6340 chr19 10920383 10920593 + 12.0 0.000 exon (NM_199141, exon 11 of 16) exon (NM_199141, exon 11 of 16) 8151 NM_001321439 78992 Hs.164026 NM_024029 ENSG00000130733 YIPF2 FinGER2 Yip1 domain family member 2 protein-coding chr11-3503 chr11 127919326 127919536 + 12.0 0.000 Intergenic LTR8B|LTR|ERV1 -289335 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr1-5358 chr1 235843417 235843627 + 12.0 0.000 intron (NR_102436, intron 1 of 3) intron (NR_102436, intron 1 of 3) 9538 NR_031718 100302139 NR_031718 ENSG00000222831 MIR1537 MIRN1537|hsa-mir-1537|mir-1537 microRNA 1537 ncRNA chr10-5123 chr10 50326732 50326942 + 12.0 0.000 intron (NM_147156, intron 8 of 10) intron (NM_147156, intron 8 of 10) -78227 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr15-919 chr15 66657412 66657622 + 12.0 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) -44719 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr2-8041 chr2 71347699 71347909 + 12.0 0.000 intron (NM_001252613, intron 1 of 27) intron (NM_001252613, intron 1 of 27) 16022 NM_014497 27332 Hs.434401 NM_014497 ENSG00000075292 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding chr6-1493 chr6 105319529 105319739 + 12.0 0.000 intron (NM_002726, intron 10 of 14) intron (NM_002726, intron 10 of 14) 83448 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr15-1980 chr15 41269832 41270042 + 12.0 0.000 intron (NM_007236, intron 4 of 6) intron (NM_007236, intron 4 of 6) -14053 NR_152822 729082 Hs.380164 NR_026757 ENSG00000247556 OIP5-AS1 cyrano|linc-OIP5 OIP5 antisense RNA 1 ncRNA chr4-2255 chr4 165836076 165836286 + 12.0 0.000 Intergenic Intergenic -37056 NM_001204760 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr3-4767 chr3 106283079 106283289 + 12.0 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -413783 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr2-6073 chr2 157167901 157168111 + 12.0 0.000 Intergenic Intergenic -89699 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr3-6170 chr3 59274069 59274279 + 12.0 0.000 Intergenic L2a|LINE|L2 -224142 NM_001351534 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr13-1470 chr13 90804677 90804887 + 12.0 0.000 Intergenic Intergenic 121815 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr13-2497 chr13 52416407 52416617 + 12.0 0.000 intron (NM_001282168, intron 12 of 13) intron (NM_001282168, intron 12 of 13) -10340 NM_018676 55901 Hs.325667 NM_018676 ENSG00000136114 THSD1 TMTSP|UNQ3010 thrombospondin type 1 domain containing 1 protein-coding chr7-4163 chr7 101600986 101601196 + 12.0 0.000 Intergenic Intergenic 28205 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr6-1325 chr6 17381475 17381685 + 12.0 0.000 Intergenic Intergenic -11925 NM_001363534 10486 Hs.132902 NM_006366 ENSG00000112186 CAP2 - cyclase associated actin cytoskeleton regulatory protein 2 protein-coding chr1-9594 chr1 44470312 44470522 + 12.0 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 46416 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr6-5486 chr6 162719186 162719396 + 12.0 0.000 intron (NM_004562, intron 1 of 11) intron (NM_004562, intron 1 of 11) -7841 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr7-3351 chr7 92987286 92987496 + 12.0 0.000 Intergenic Intergenic 130588 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding chr1-9932 chr1 76308086 76308296 + 12.0 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 233445 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr9-4469 chr9 30257021 30257231 + 12.0 0.000 Intergenic LTR16A|LTR|ERVL 151328 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr11-3114 chr11 34318786 34318996 + 12.0 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 39119 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr10-3789 chr10 127912922 127913132 + 12.0 0.000 intron (NM_001323356, intron 1 of 19) intron (NM_001323356, intron 1 of 19) 5924 NM_001316676 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr19-3881 chr19 35283396 35283606 + 12.0 0.000 intron (NM_021175, intron 1 of 2) AluJr|SINE|Alu 973 NM_021175 57817 Hs.8821 NM_021175 ENSG00000105697 HAMP HEPC|HFE2B|LEAP1|PLTR hepcidin antimicrobial peptide protein-coding chr6-2024 chr6 43304596 43304806 + 12.0 0.000 TTS (NM_001366068) TTS (NM_001366068) 4125 NM_206922 401262 Hs.653165 NM_206922 ENSG00000146215 CRIP3 CRP-3|TLP|TLP-A|h6LIMo cysteine rich protein 3 protein-coding chr9-984 chr9 135480499 135480709 + 12.0 0.000 intron (NM_014811, intron 1 of 3) intron (NM_014811, intron 1 of 3) 822 NM_014811 9858 Hs.533260 NM_014811 ENSG00000196422 PPP1R26 KIAA0649|NRBE3 protein phosphatase 1 regulatory subunit 26 protein-coding chr1-1768 chr1 10796543 10796753 + 12.0 0.000 promoter-TSS (NM_017766) promoter-TSS (NM_017766) -2 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr7-1665 chr7 102404663 102404873 + 12.0 0.000 TTS (NR_031669) TTS (NR_031669) 1087 NR_031669 100313829 NR_031669 ENSG00000221510 MIR548O MIRN548O microRNA 548o ncRNA chr9-2247 chr9 71623848 71624058 + 12.0 0.000 Intergenic ERVL-E-int|LTR|ERVL 144560 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr10-4522 chr10 92126313 92126523 + 12.0 0.000 intron (NM_001178137, intron 6 of 9) intron (NM_001178137, intron 6 of 9) 116861 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr6-2621 chr6 142618884 142619094 + 12.0 0.000 intron (NR_027311, intron 1 of 2) intron (NR_027311, intron 1 of 2) 18847 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr8-1745 chr8 23383040 23383250 + 12.0 0.000 intron (NM_002318, intron 1 of 13) intron (NM_002318, intron 1 of 13) 20975 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr12-4440 chr12 10439988 10440198 + 12.0 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -4100 NM_002260 3822 Hs.591157 NM_002260 ENSG00000205809 KLRC2 CD159c|NKG2-C|NKG2C killer cell lectin like receptor C2 protein-coding chr10-1973 chr10 32005063 32005273 + 12.0 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 51257 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr8-4004 chr8 56425317 56425527 + 12.0 0.000 Intergenic Intergenic -20385 NR_125813 101929415 Hs.701520 NR_125813 ENSG00000254254 LOC101929415 - uncharacterized LOC101929415 ncRNA chr21-91 chr21 8228622 8228832 + 12.0 0.000 TTS (NR_038958) TTS (NR_038958) 14839 NR_003287 100008589 NR_003287 RNA28SN5 RN28S1|RNA28S5 RNA, 28S ribosomal N5 rRNA chr13-1733 chr13 101529458 101529668 + 12.0 0.000 intron (NM_001271756, intron 1 of 9) HAL1M8|LINE|L1 39611 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr11-3104 chr11 32586728 32586938 + 12.0 0.000 intron (NM_001307929, intron 1 of 7) intron (NM_001307929, intron 1 of 7) 3002 NM_006360 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr11-2282 chr11 8871304 8871514 + 12.0 0.000 intron (NM_005418, intron 2 of 22) intron (NM_005418, intron 2 of 22) 39542 NM_005418 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr3-8392 chr3 98977703 98977913 + 12.0 0.000 Intergenic Intergenic -76113 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr1-7001 chr1 168809450 168809660 + 12.0 0.000 Intergenic Intergenic 22614 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr9-2884 chr9 131214390 131214600 + 12.0 0.000 intron (NM_001318324, intron 30 of 35) intron (NM_001318324, intron 30 of 35) 24356 NM_001318325 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr7-8925 chr7 95330687 95330897 + 12.0 0.000 Intergenic Intergenic -6260 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr12-2546 chr12 106342420 106342630 + 12.0 0.000 intron (NM_152772, intron 9 of 9) intron (NM_152772, intron 9 of 9) -15223 NM_018082 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding chr5-7379 chr5 21763307 21763517 + 12.0 0.000 intron (NM_004061, intron 12 of 14) intron (NM_004061, intron 12 of 14) -121042 NR_132788 106635540 NR_132788 SNORA105B - small nucleolar RNA, H/ACA box 105B snoRNA chrX-1554 chrX 46973322 46973532 + 12.0 0.000 intron (NM_014735, intron 1 of 10) intron (NM_014735, intron 1 of 10) 61006 NM_014735 9767 Hs.371977 NM_014735 ENSG00000102221 JADE3 JADE-3|PHF16 jade family PHD finger 3 protein-coding chr1-5250 chr1 202685643 202685853 + 12.0 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) 24706 NM_177402 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr6-1614 chr6 53889061 53889271 + 12.0 0.000 intron (NM_018214, intron 4 of 13) L1ME3A|LINE|L1 -40816 NR_125842 101927189 Hs.453592 NR_125842 ENSG00000236740 LOC101927189 - uncharacterized LOC101927189 ncRNA chrX-2205 chrX 41238666 41238876 + 12.0 0.000 Intergenic Intergenic -36968 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr12-2864 chr12 8649376 8649586 + 12.0 0.000 intron (NR_123734, intron 8 of 9) intron (NR_123734, intron 8 of 9) 13345 NR_123733 8076 Hs.512842 NM_003480 ENSG00000197614 MFAP5 AAT9|MAGP-2|MAGP2|MFAP-5|MP25 microfibril associated protein 5 protein-coding chr1-11200 chr1 242882469 242882679 + 12.0 0.000 Intergenic Intergenic 219170 NR_029401 731275 Hs.722350 NR_029401 ENSG00000214837 LINC01347 - long intergenic non-protein coding RNA 1347 ncRNA chr5-7383 chr5 22151943 22152153 + 12.0 0.000 intron (NR_003921, intron 3 of 3) intron (NR_003921, intron 3 of 3) 9696 NR_003921 5369 Hs.247975 NM_031887 ENSG00000168967 PMCHL1 - pro-melanin concentrating hormone like 1 (pseudogene) pseudo chr2-8889 chr2 177883540 177883750 + 12.0 0.000 intron (NM_001077197, intron 5 of 20) LTR33|LTR|ERVL 5111 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr11-3052 chr11 8317592 8317802 + 12.0 0.000 Intergenic LTR8|LTR|ERV1 -48910 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr3-6484 chr3 111083228 111083438 + 12.0 0.000 intron (NM_001243288, intron 1 of 8) MLT1A|LTR|ERVL-MaLR 11517 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr13-2762 chr13 98766242 98766452 + 12.0 0.000 Intergenic HERV3-int|LTR|ERV1 -13675 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr3-2843 chr3 28598378 28598588 + 12.0 0.000 intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 23205 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr18-966 chr18 55479624 55479834 + 12.0 0.000 TTS (NR_039754) TTS (NR_039754) 508 NR_039754 100616290 NR_039754 ENSG00000264571 MIR4529 - microRNA 4529 ncRNA chr11-1202 chr11 133738766 133738976 + 12.0 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 71505 NR_120444 646522 Hs.560000 NR_120444 ENSG00000255258 LINC02743 - long intergenic non-protein coding RNA 2743 ncRNA chr13-532 chr13 33797558 33797768 + 12.0 0.000 Intergenic Intergenic -20406 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr22-1383 chr22 36930788 36930998 + 12.0 0.000 intron (NM_000395, intron 8 of 13) intron (NM_000395, intron 8 of 13) 17265 NM_000395 1439 Hs.592192 NM_000395 ENSG00000100368 CSF2RB CD131|CDw131|IL3RB|IL5RB|SMDP5|betaGMR colony stimulating factor 2 receptor beta common subunit protein-coding chr2-2082 chr2 219274665 219274875 + 12.0 0.000 Intergenic Intergenic -4596 NM_001039550 3300 Hs.77768 NM_006736 ENSG00000135924 DNAJB2 CMT2T|DSMA5|HSJ-1|HSJ1|HSPF3 DnaJ heat shock protein family (Hsp40) member B2 protein-coding chr8-1031 chr8 29828390 29828600 + 12.0 0.000 promoter-TSS (NR_125817) promoter-TSS (NR_125817) 9 NR_125817 101929470 Hs.204721 NR_125817 ENSG00000248964 LOC101929470 - uncharacterized LOC101929470 ncRNA chr20-1188 chr20 3929453 3929663 + 12.0 0.000 non-coding (NR_136715, exon 7 of 7) non-coding (NR_136715, exon 7 of 7) -11995 NR_031722 100302282 NR_031722 ENSG00000283320 MIR103B2 MIR103-2-AS|MIR103-2AS|MIRN103-2AS|hsa-mir-103-2-as microRNA 103b-2 ncRNA chr1-2343 chr1 2428863 2429073 + 12.0 0.000 Intergenic Intergenic -16397 NM_153818 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr3-3912 chr3 47475217 47475427 + 12.0 0.000 intron (NM_012235, intron 1 of 22) intron (NM_012235, intron 1 of 22) 619 NM_001320044 22937 Hs.531789 NM_012235 ENSG00000114650 SCAP - SREBF chaperone protein-coding chr20-1624 chr20 16147841 16148051 + 12.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -162064 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr10-663 chr10 31031709 31031919 + 12.0 0.000 intron (NM_001143766, intron 1 of 7) CpG 123 NR_026560 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr11-5169 chr11 3981895 3982105 + 12.0 0.000 intron (NM_001277962, intron 2 of 12) AluJo|SINE|Alu -112685 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr10-4161 chr10 89625384 89625594 + 12.0 0.000 intron (NM_148977, intron 1 of 6) intron (NM_148977, intron 1 of 6) 18427 NM_138316 53354 Hs.163555 NM_138316 ENSG00000152782 PANK1 PANK pantothenate kinase 1 protein-coding chr7-1907 chr7 1676010 1676220 + 12.0 0.000 Intergenic Intergenic -12004 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr19-1229 chr19 18543516 18543726 + 12.0 0.000 promoter-TSS (NM_001308373) promoter-TSS (NM_001308373) -48 NM_012181 23770 Hs.173464 NM_012181 ENSG00000105701 FKBP8 FKBP38|FKBPr38 FKBP prolyl isomerase 8 protein-coding chr6-4971 chr6 106354572 106354782 + 12.0 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -6040 NM_001371242 chr17-4450 chr17 50331569 50331779 + 12.0 0.000 Intergenic LTR104_Mam|LTR|Gypsy -14452 NM_022167 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr11-2549 chr11 88544470 88544680 + 12.0 0.000 intron (NM_001143831, intron 7 of 8) intron (NM_001143831, intron 7 of 8) 39999 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr18-1495 chr18 76460583 76460793 + 12.0 0.000 intron (NM_014643, intron 2 of 6) intron (NM_014643, intron 2 of 6) -30964 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr22-1205 chr22 25452406 25452616 + 12.0 0.000 intron (NR_033734, intron 1 of 4) AluSg|SINE|Alu -3135 NR_106875 102466198 NR_106875 ENSG00000277872 MIR6817 hsa-mir-6817 microRNA 6817 ncRNA chr15-1449 chr15 78931637 78931847 + 12.0 0.000 5' UTR (NM_001319137, exon 8 of 13) 5' UTR (NM_001319137, exon 8 of 13) 13356 NM_004390 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr16-2350 chr16 53086219 53086429 + 12.0 0.000 intron (NM_025134, intron 1 of 38) intron (NM_025134, intron 1 of 38) 31333 NM_025134 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr20-1223 chr20 23937391 23937601 + 12.0 0.000 Intergenic Intergenic 49379 NM_178312 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr2-11121 chr2 133734849 133735059 + 12.0 0.000 Intergenic Intergenic -166491 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr2-2145 chr2 160574777 160574987 + 12.0 0.000 Intergenic Intergenic -81075 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr4-2779 chr4 18380122 18380332 + 12.0 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -358352 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr4-2077 chr4 20773382 20773592 + 12.0 0.000 intron (NM_025221, intron 2 of 7) intron (NM_025221, intron 2 of 7) 73029 NM_001330747 133015 Hs.479298 NM_145048 ENSG00000163138 PACRGL C4orf28 parkin coregulated like protein-coding chr3-6370 chr3 87866037 87866247 + 12.0 0.000 intron (NM_001322210, intron 2 of 2) intron (NM_001322210, intron 2 of 2) 73436 NM_001322209 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr2-5131 chr2 24317516 24317726 + 12.0 0.000 intron (NM_001348182, intron 2 of 38) HERVL40-int|LTR|ERVL 42915 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr3-5905 chr3 40238230 40238440 + 12.0 0.000 intron (NM_001284426, intron 10 of 14) intron (NM_001284426, intron 10 of 14) 71363 NR_033965 440952 Hs.660388 NR_033965 ENSG00000280739 EIF1B-AS1 - EIF1B antisense RNA 1 ncRNA chr6-3855 chr6 43314347 43314557 + 12.0 0.000 Intergenic L3|LINE|CR1 -5626 NM_001366068 401262 Hs.653165 NM_206922 ENSG00000146215 CRIP3 CRP-3|TLP|TLP-A|h6LIMo cysteine rich protein 3 protein-coding chr12-2292 chr12 112347636 112347846 + 12.0 0.000 intron (NM_001109662, intron 1 of 75) intron (NM_001109662, intron 1 of 75) 34690 NM_001109662 283450 Hs.530943 NM_173813 ENSG00000173064 HECTD4 C12ord51|C12orf51|HEEL|POTAGE HECT domain E3 ubiquitin protein ligase 4 protein-coding chr4-2524 chr4 40221807 40222017 + 12.0 0.000 intron (NM_001278360, intron 2 of 3) Tigger1|DNA|TcMar-Tigger 24881 NM_004310 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chr11-3313 chr11 104773063 104773273 + 12.0 0.000 Intergenic Intergenic 125502 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr18-798 chr18 58447758 58447968 + 12.0 0.000 Intergenic AluJo|SINE|Alu -3211 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr14-1802 chr14 31336787 31336997 + 12.0 0.000 intron (NM_015473, intron 22 of 35) Tigger3a|DNA|TcMar-Tigger 83658 NM_015473 25938 Hs.744979 NM_015473 ENSG00000129493 HEATR5A C14orf125 HEAT repeat containing 5A protein-coding chr16-1120 chr16 4602461 4602671 + 12.0 0.000 Intergenic Intergenic 12322 NM_145253 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr2-10010 chr2 24429612 24429822 + 12.0 0.000 Intergenic Intergenic -61537 NM_003743 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr1-3894 chr1 61638475 61638685 + 12.0 0.000 Intergenic Intergenic -15662 NR_073400 414927 Hs.123471 NR_073400 MGC34796 - sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene pseudo chr11-3232 chr11 69718243 69718453 + 12.0 0.000 Intergenic Intergenic -14326 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr3-3114 chr3 148206055 148206265 + 12.0 0.000 Intergenic Intergenic -74731 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr16-4347 chr16 31440725 31440935 + 12.0 0.000 intron (NM_001353381, intron 1 of 1) intron (NM_001353381, intron 1 of 1) 1959 NM_001136509 283933 Hs.722243 NM_001136509 ENSG00000176723 ZNF843 - zinc finger protein 843 protein-coding chr11-5884 chr11 12123307 12123517 + 12.0 0.000 intron (NM_001346293, intron 2 of 26) Kanga1a|DNA|TcMar-Tc2 12822 NM_001346299 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr17-2065 chr17 67053501 67053711 + 12.0 0.000 intron (NM_000727, intron 1 of 3) MER20|DNA|hAT-Charlie 9052 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr3-4117 chr3 113736600 113736810 + 12.0 0.000 intron (NM_025146, intron 1 of 4) FLAM_A|SINE|Alu 9544 NM_001308445 80218 Hs.372378 NM_025146 ENSG00000121579 NAA50 MAK3|NAT13|NAT13P|NAT5|NAT5P|SAN|hNaa50p N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding chr13-3177 chr13 109862618 109862828 + 12.0 0.000 Intergenic Intergenic -76140 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr2-5397 chr2 106192842 106193052 + 12.0 0.000 intron (NM_025076, intron 1 of 14) intron (NM_025076, intron 1 of 14) 1392 NM_025076 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr8-2070 chr8 124646146 124646356 + 12.0 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 82222 NM_001363299 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr14-283 chr14 34629993 34630203 + 12.0 0.000 promoter-TSS (NM_152233) promoter-TSS (NM_152233) 50 NM_001366519 58533 Hs.276523 NM_021249 ENSG00000129515 SNX6 MSTP010|TFAF2 sorting nexin 6 protein-coding chr8-4625 chr8 132679964 132680174 + 12.0 0.000 Intergenic Intergenic -4524 NR_135909 23639 Hs.591865 NM_012472 ENSG00000129295 LRRC6 CILD19|LRTP|TSLRP leucine rich repeat containing 6 protein-coding chr2-3272 chr2 21045889 21046099 + 12.0 0.000 Intergenic AluSg|SINE|Alu -1921 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr22-1243 chr22 46866745 46866955 + 12.0 0.000 intron (NM_001284305, intron 4 of 12) Tigger4|DNA|TcMar-Tigger 49192 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr7-6926 chr7 80659405 80659615 + 12.0 0.000 intron (NM_001371079, intron 4 of 13) intron (NM_001371079, intron 4 of 13) 12857 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr8-5867 chr8 13753271 13753481 + 12.0 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 123686 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr11-4378 chr11 75543107 75543317 + 12.0 0.000 Intergenic LTR1A2|LTR|ERV1 -17271 NM_030792 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr6-1437 chr6 156832711 156832921 + 12.0 0.000 intron (NM_017519, intron 2 of 18) intron (NM_017519, intron 2 of 18) -53085 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr12-4893 chr12 65312209 65312419 + 12.0 0.000 intron (NM_001031679, intron 2 of 6) intron (NM_001031679, intron 2 of 6) 33327 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr1-2849 chr1 119631800 119632010 + 12.0 0.000 intron (NM_001080470, intron 1 of 2) intron (NM_001080470, intron 1 of 2) 16361 NM_001080470 90874 Hs.381105 NM_001080470 ENSG00000143067 ZNF697 - zinc finger protein 697 protein-coding chr5-711 chr5 80960305 80960515 + 12.0 0.000 promoter-TSS (NM_006909) promoter-TSS (NM_006909) 47 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding chr2-2458 chr2 98805501 98805711 + 12.0 0.000 intron (NM_207362, intron 7 of 9) intron (NM_207362, intron 7 of 9) -33708 NR_126337 101927070 Hs.469395 NR_126337 LINC02611 - long intergenic non-protein coding RNA 2611 ncRNA chr1-10245 chr1 117348177 117348387 + 12.0 0.000 Intergenic Intergenic -19167 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr6-3954 chr6 93356825 93357035 + 12.0 0.000 exon (NM_001288629, exon 5 of 17) exon (NM_001288629, exon 5 of 17) 62629 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr11-6320 chr11 62025547 62025757 + 12.0 0.000 Intergenic Intergenic -58018 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr11-8017 chr11 14266992 14267202 + 12.0 0.000 3' UTR (NM_006108, exon 16 of 16) 3' UTR (NM_006108, exon 16 of 16) 91388 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr4-8196 chr4 134104893 134105103 + 12.0 0.000 Intergenic Intergenic 96791 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr4-3251 chr4 85968078 85968288 + 12.0 0.000 intron (NM_031305, intron 2 of 6) intron (NM_031305, intron 2 of 6) 38167 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr2-5519 chr2 150127969 150128179 + 12.0 0.000 Intergenic Charlie8|DNA|hAT-Charlie 128933 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr18-1887 chr18 28855632 28855842 + 12.0 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -678607 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr1-9914 chr1 73328377 73328587 + 12.0 0.000 intron (NR_110676, intron 3 of 3) L1PA17|LINE|L1 22312 NR_110676 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chr12-1840 chr12 30065101 30065311 + 12.0 0.000 Intergenic Intergenic -280447 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr12-2794 chr12 83387993 83388203 + 12.0 0.000 Intergenic Intergenic 700943 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr14-1726 chr14 50961454 50961664 + 12.0 0.000 Intergenic Intergenic -17076 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr22-2145 chr22 39751835 39752045 + 12.0 0.000 intron (NM_152512, intron 6 of 6) intron (NM_152512, intron 6 of 6) 141820 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr4-2508 chr4 28212348 28212558 + 12.0 0.000 Intergenic L1MB8|LINE|L1 -607129 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr2-3984 chr2 82471756 82471966 + 12.0 0.000 Intergenic Intergenic -384942 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr4-2624 chr4 147547274 147547484 + 12.0 0.000 Intergenic Intergenic 66282 NR_148963 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr2-1557 chr2 239959225 239959435 + 12.0 0.000 non-coding (NR_136156, exon 8 of 8) non-coding (NR_136156, exon 8 of 8) -16236 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr8-3494 chr8 103357536 103357746 + 12.0 0.000 Intergenic Intergenic -13897 NM_138455 115908 Hs.405614 NM_138455 ENSG00000164932 CTHRC1 - collagen triple helix repeat containing 1 protein-coding chr1-3016 chr1 234975284 234975494 + 12.0 0.000 Intergenic LFSINE_Vert|SINE|tRNA -11390 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr2-3197 chr2 217289953 217290163 + 12.0 0.000 intron (NR_026597, intron 12 of 12) intron (NR_026597, intron 12 of 12) 7325 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr9-1933 chr9 16197689 16197899 + 12.0 0.000 Intergenic Intergenic 55313 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr19-1496 chr19 41871831 41872041 + 12.0 0.000 3' UTR (NM_001022, exon 6 of 6) 3' UTR (NM_001022, exon 6 of 6) 2309 NR_106855 102465478 NR_106855 ENSG00000276926 MIR6797 hsa-mir-6797 microRNA 6797 ncRNA chr9-1351 chr9 133106933 133107143 + 12.0 0.000 intron (NM_001271775, intron 7 of 17) intron (NM_001271775, intron 7 of 17) 14202 NM_001271776 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr12-1719 chr12 22286822 22287032 + 12.0 0.000 intron (NM_003034, intron 2 of 4) intron (NM_003034, intron 2 of 4) 47787 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr8-4219 chr8 86200689 86200899 + 12.0 0.000 Intergenic Intergenic 29587 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr13-1127 chr13 26084480 26084690 + 12.0 0.000 Intergenic Intergenic -25063 NR_146971 107984009 NR_146971 LINC00415 - long intergenic non-protein coding RNA 415 ncRNA chr10-2833 chr10 30612153 30612363 + 12.0 0.000 intron (NM_183058, intron 4 of 4) intron (NM_183058, intron 4 of 4) 17495 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr7-5064 chr7 1984640 1984850 + 12.0 0.000 intron (NM_001013837, intron 14 of 18) L1M8|LINE|L1 -44174 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr17-2421 chr17 82315717 82315927 + 12.0 0.000 intron (NM_006137, intron 3 of 3) intron (NM_006137, intron 3 of 3) 1786 NM_006137 924 Hs.36972 NM_006137 ENSG00000173762 CD7 GP40|LEU-9|TP41|Tp40 CD7 molecule protein-coding chr8-5654 chr8 111376118 111376328 + 12.0 0.000 promoter-TSS (NR_146282) promoter-TSS (NR_146282) -416 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr17-4223 chr17 40107632 40107842 + 12.0 0.000 Intergenic Intergenic -7148 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|REVERBA|REVERBalpha|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr20-2859 chr20 62419115 62419325 + 12.0 0.000 intron (NM_080833, intron 2 of 13) intron (NM_080833, intron 2 of 13) 8319 NM_080833 140893 Hs.180374 NM_080833 ENSG00000130701 RBBP8NL C20orf151 RBBP8 N-terminal like protein-coding chr7-5073 chr7 2088666 2088876 + 12.0 0.000 TTS (NR_145797) TTS (NR_145797) 281 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr7-2980 chr7 4612327 4612537 + 12.0 0.000 Intergenic MER1A|DNA|hAT-Charlie -69863 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr2-1692 chr2 160221797 160222007 + 12.0 0.000 Intergenic Intergenic -21589 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr22-1282 chr22 35684486 35684696 + 12.0 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -33281 NM_030642 80831 Hs.326561 NM_030642 ENSG00000128313 APOL5 APOL-V|APOLV apolipoprotein L5 protein-coding chr7-1382 chr7 131076068 131076278 + 12.0 0.000 intron (NR_109850, intron 2 of 5) intron (NR_109850, intron 2 of 5) 30857 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr19-3087 chr19 5065929 5066139 + 12.0 0.000 intron (NM_001370094, intron 6 of 10) intron (NM_001370094, intron 6 of 10) 96921 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr5-4722 chr5 42741772 42741982 + 12.0 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -14941 NM_001134848 100129792 Hs.745017 NM_001134848 ENSG00000198865 CCDC152 CH5400 coiled-coil domain containing 152 protein-coding chr2-8926 chr2 183566581 183566791 + 12.0 0.000 Intergenic L2a|LINE|L2 442243 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr19-1726 chr19 51927133 51927343 + 12.0 0.000 promoter-TSS (NM_024840) promoter-TSS (NM_024840) -234 NM_001031721 79898 Hs.183390 NM_024840 ENSG00000176024 ZNF613 - zinc finger protein 613 protein-coding chr6-2415 chr6 155154246 155154456 + 12.0 0.000 intron (NM_012454, intron 6 of 25) intron (NM_012454, intron 6 of 25) -62615 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr11-5409 chr11 67769126 67769336 + 12.0 0.000 Intergenic MER21-int|LTR|ERVL 36105 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr1-10041 chr1 89439314 89439524 + 12.0 0.000 Intergenic HERVL-int|LTR|ERVL 31740 NR_003133 400759 Hs.661968 NR_003133 ENSG00000225492 GBP1P1 - guanylate binding protein 1 pseudogene 1 pseudo chr3-1047 chr3 190386247 190386457 + 12.0 0.000 Intergenic Intergenic -1520 NM_006580 10686 Hs.251391 NM_006580 ENSG00000113946 CLDN16 HOMG3|PCLN1 claudin 16 protein-coding chr6-2389 chr6 145413935 145414145 + 12.0 0.000 Intergenic Intergenic 272837 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr12-4664 chr12 47121412 47121622 + 12.0 0.000 intron (NM_001281429, intron 2 of 2) intron (NM_001281429, intron 2 of 2) -41558 NM_001370299 347902 Hs.121520 NM_181847 ENSG00000139211 AMIGO2 ALI1|AMIGO-2|DEGA adhesion molecule with Ig like domain 2 protein-coding chr6-1993 chr6 11869790 11870000 + 12.0 0.000 Intergenic Intergenic -90848 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr2-2572 chr2 227818520 227818730 + 12.0 0.000 Intergenic MADE2|DNA|TcMar-Mariner 4783 NM_004591 6364 Hs.75498 NM_004591 ENSG00000115009 CCL20 CKb4|Exodus|LARC|MIP-3-alpha|MIP-3a|MIP3A|SCYA20|ST38 C-C motif chemokine ligand 20 protein-coding chrX-1011 chrX 45808177 45808387 + 12.0 0.000 Intergenic Intergenic 43208 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr16-1737 chr16 70254007 70254217 + 12.0 0.000 intron (NM_001605, intron 17 of 20) intron (NM_001605, intron 17 of 20) -2172 NM_058219 118460 Hs.660633 NM_058219 ENSG00000223496 EXOSC6 EAP4|MTR3|Mtr3p|hMtr3p|p11 exosome component 6 protein-coding chr12-5204 chr12 105507333 105507543 + 12.0 0.000 Intergenic Intergenic 176747 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr1-5316 chr1 223244814 223245024 + 12.0 0.000 intron (NM_001037175, intron 5 of 5) intron (NM_001037175, intron 5 of 5) -101671 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr3-3526 chr3 36781616 36781826 + 12.0 0.000 Intergenic Intergenic 40779 NR_147141 105377031 Hs.333862 NR_147141 ENSG00000279727 LINC02033 - long intergenic non-protein coding RNA 2033 ncRNA chr3-2075 chr3 188186044 188186254 + 12.0 0.000 intron (NM_001167672, intron 1 of 9) intron (NM_001167672, intron 1 of 9) 7606 NR_024413 401105 Hs.679026 NM_207488 ENSG00000279891 FLJ42393 AVPC1948 uncharacterized LOC401105 ncRNA chr15-2026 chr15 49460727 49460937 + 12.0 0.000 intron (NM_002009, intron 2 of 3) intron (NM_002009, intron 2 of 3) 37590 NM_002009 2252 Hs.567268 NM_002009 ENSG00000140285 FGF7 HBGF-7|KGF fibroblast growth factor 7 protein-coding chr8-1608 chr8 143876112 143876322 + 12.0 0.000 intron (NM_031308, intron 1 of 1) intron (NM_031308, intron 1 of 1) 2247 NM_031308 83481 Hs.200412 NM_031308 ENSG00000261150 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding chr10-5623 chr10 95391376 95391586 + 12.0 0.000 intron (NM_001034955, intron 12 of 30) intron (NM_001034955, intron 12 of 30) 49699 NM_001290297 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr9-5486 chr9 100638058 100638268 + 12.0 0.000 Intergenic L1P2|LINE|L1 60084 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr12-1781 chr12 108823757 108823967 + 12.0 0.000 intron (NM_018984, intron 2 of 14) AluSz|SINE|Alu 3689 NM_001161331 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr3-5910 chr3 41066219 41066429 + 12.0 0.000 Intergenic Intergenic -133181 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr10-5152 chr10 52977474 52977684 + 12.0 0.000 Intergenic Intergenic -205879 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr18-1734 chr18 6120116 6120326 + 12.0 0.000 intron (NM_001365769, intron 14 of 16) intron (NM_001365769, intron 14 of 16) -136523 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA chr14-3047 chr14 59570039 59570249 + 12.0 0.000 intron (NM_001164399, intron 3 of 19) LTR41|LTR|ERVL 6668 NM_001164399 729665 NM_001164399 ENSG00000151838 CCDC175 C14orf38|c14_5395 coiled-coil domain containing 175 protein-coding chr15-5155 chr15 91890625 91890835 + 12.0 0.000 intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 36426 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr12-1830 chr12 15614069 15614279 + 12.0 0.000 Intergenic L1PA16|LINE|L1 67563 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr18-1922 chr18 33982338 33982548 + 12.0 0.000 intron (NM_001353232, intron 6 of 9) L1MCa|LINE|L1 66169 NM_001353236 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr2-2970 chr2 32135513 32135723 + 12.0 0.000 intron (NM_001363875, intron 8 of 15) intron (NM_001363875, intron 8 of 15) -30223 NM_001193514 55676 Hs.23248 NM_017964 ENSG00000152683 SLC30A6 MST103|MSTP103|ZNT6 solute carrier family 30 member 6 protein-coding chr9-2321 chr9 7368408 7368618 + 12.0 0.000 Intergenic Intergenic 431265 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr5-2981 chr5 71190 71400 + 12.0 0.000 Intergenic Intergenic -20873 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr13-2223 chr13 24370669 24370879 + 12.0 0.000 Intergenic Intergenic 39324 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr17-847 chr17 7561865 7562075 + 12.0 0.000 promoter-TSS (NR_037926) promoter-TSS (NR_037926) -22 NR_037926 100533955 Hs.129673 NR_037926 SENP3-EIF4A1 - SENP3-EIF4A1 readthrough (NMD candidate) ncRNA chr22-1362 chr22 29202161 29202371 + 12.0 0.000 Intergenic Intergenic -3630 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr2-13955 chr2 186675472 186675682 + 12.0 0.000 intron (NM_001145000, intron 24 of 27) intron (NM_001145000, intron 24 of 27) -18483 NM_177454 165215 Hs.28872 NM_177454 ENSG00000144369 FAM171B KIAA1946 family with sequence similarity 171 member B protein-coding chr22-1204 chr22 25448922 25449132 + 12.0 0.000 intron (NR_033734, intron 1 of 4) L1M3|LINE|L1 940 NR_033734 1416 Hs.571835 NR_033733 ENSG00000100058 CRYBB2P1 CRYB2B crystallin beta B2 pseudogene 1 pseudo chr6-2270 chr6 72944680 72944890 + 12.0 0.000 intron (NM_001160132, intron 1 of 13) intron (NM_001160132, intron 1 of 13) 22968 NR_036244 100423005 NR_036244 ENSG00000266180 MIR4282 - microRNA 4282 ncRNA chr19-3511 chr19 41327333 41327543 + 12.0 0.000 Intergenic Intergenic 16961 NM_001346100 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr1-5985 chr1 42603312 42603522 + 12.0 0.000 intron (NM_001080850, intron 10 of 16) MLT1A1|LTR|ERVL-MaLR -55006 NM_001330510 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr21-448 chr21 42524915 42525125 + 12.0 0.000 intron (NM_001320537, intron 2 of 19) MER21C|LTR|ERVL 11168 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr20-700 chr20 18314958 18315168 + 12.0 0.000 intron (NM_001352462, intron 7 of 7) intron (NM_001352462, intron 7 of 7) 26536 NM_001283004 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr5-1563 chr5 115583576 115583786 + 12.0 0.000 intron (NM_001164469, intron 3 of 3) intron (NM_001164469, intron 3 of 3) -18474 NR_109875 101927100 Hs.745340 NR_109874 LOC101927100 - uncharacterized LOC101927100 ncRNA chr20-1602 chr20 6632098 6632308 + 12.0 0.000 Intergenic Intergenic 103933 NR_146909 105372516 Hs.580741 NR_146909 LINC01713 - long intergenic non-protein coding RNA 1713 ncRNA chr18-284 chr18 51029999 51030209 + 12.0 0.000 promoter-TSS (NM_005359) promoter-TSS (NM_005359) -109 NM_005359 4089 Hs.75862 NM_005359 ENSG00000141646 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding chr18-288 chr18 57435257 57435467 + 12.0 0.000 promoter-TSS (NM_004852) promoter-TSS (NM_004852) -12 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr11-6919 chr11 109026947 109027157 + 12.0 0.000 Intergenic L1MA2|LINE|L1 361983 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr7-2116 chr7 23013125 23013335 + 12.0 0.000 intron (NM_032581, intron 1 of 10) intron (NM_032581, intron 1 of 10) 900 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr1-4976 chr1 55632161 55632371 + 12.0 0.000 Intergenic Kanga11a|DNA|TcMar-Tc2 312697 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr5-5458 chr5 138581414 138581624 + 12.0 0.000 Intergenic Intergenic -6118 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr6-1460 chr6 12025092 12025302 + 12.0 0.000 intron (NM_002114, intron 2 of 8) intron (NM_002114, intron 2 of 8) 12885 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr1-5413 chr1 21368517 21368727 + 12.0 0.000 Intergenic Intergenic -23118 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr1-6829 chr1 97562267 97562477 + 12.0 0.000 intron (NM_000110, intron 11 of 22) intron (NM_000110, intron 11 of 22) -234549 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr16-2274 chr16 2710068 2710278 + 12.0 0.000 Intergenic Intergenic 10051 NM_001318395 83886 Hs.332878 NM_031948 ENSG00000172382 PRSS27 CAPH2|MPN serine protease 27 protein-coding chr22-1011 chr22 20591243 20591453 + 12.0 0.000 Intergenic Intergenic 83301 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr2-3138 chr2 177989574 177989784 + 12.0 0.000 intron (NM_001077197, intron 3 of 20) intron (NM_001077197, intron 3 of 20) -66842 NM_001077358 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr1-4364 chr1 119804244 119804454 + 12.0 0.000 intron (NM_001159353, intron 2 of 2) intron (NM_001159353, intron 2 of 2) 7111 NM_001159353 83998 Hs.660883 NM_032044 ENSG00000134193 REG4 GISP|REG-IV|RELP regenerating family member 4 protein-coding chr11-2043 chr11 67253406 67253616 + 12.0 0.000 exon (NM_012308, exon 19 of 21) exon (NM_012308, exon 19 of 21) -12962 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr5-1939 chr5 946216 946426 + 12.0 0.000 Intergenic Intergenic 51019 NR_104615 100506688 Hs.532063 NM_001242737 ENSG00000215246 LOC100506688 - uncharacterized LOC100506688 ncRNA chr1-5713 chr1 65413225 65413435 + 12.0 0.000 3' UTR (NM_014787, exon 19 of 19) 3' UTR (NM_014787, exon 19 of 19) -7322 NM_002303 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr19-1490 chr19 17234898 17235108 + 12.0 0.000 intron (NM_005234, intron 3 of 3) intron (NM_005234, intron 3 of 3) 8777 NM_024578 79629 Hs.422676 NM_024578 ENSG00000099330 OCEL1 FWP009|S863-9 occludin/ELL domain containing 1 protein-coding chr3-4785 chr3 119310230 119310440 + 12.0 0.000 intron (NM_020754, intron 1 of 11) intron (NM_020754, intron 1 of 11) 12425 NR_046748 100874246 Hs.607097 NR_046748 ENSG00000241155 ARHGAP31-AS1 - ARHGAP31 antisense RNA 1 ncRNA chr8-4088 chr8 68046246 68046456 + 12.0 0.000 intron (NM_024870, intron 8 of 39) intron (NM_024870, intron 8 of 39) 94305 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr12-4591 chr12 32155269 32155479 + 12.0 0.000 intron (NR_148725, intron 1 of 9) intron (NR_148725, intron 1 of 9) 48527 NM_001354189 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr22-1333 chr22 19496397 19496607 + 12.0 0.000 intron (NM_001369291, intron 7 of 18) intron (NM_001369291, intron 7 of 18) 16582 NR_161281 8318 Hs.474217 NM_003504 ENSG00000093009 CDC45 CDC45L|CDC45L2|MGORS7|PORC-PI-1 cell division cycle 45 protein-coding chr11-5686 chr11 219401 219611 + 12.0 0.000 non-coding (NR_163402, exon 6 of 7) non-coding (NR_163402, exon 6 of 7) 10170 NR_106801 102465445 NR_106801 ENSG00000283920 MIR6743 hsa-mir-6743 microRNA 6743 ncRNA chr9-2140 chr9 114305918 114306128 + 12.0 0.000 intron (NM_032888, intron 57 of 60) intron (NM_032888, intron 57 of 60) -17000 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr3-2933 chr3 54600456 54600666 + 12.0 0.000 intron (NM_018398, intron 9 of 37) intron (NM_018398, intron 9 of 37) 39296 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr5-8135 chr5 99398971 99399181 + 12.0 0.000 Intergenic Intergenic -134914 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr1-8923 chr1 7188481 7188691 + 12.0 0.000 intron (NM_001349608, intron 3 of 21) L1MB3|LINE|L1 201168 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr20-787 chr20 54257014 54257224 + 12.0 0.000 Intergenic MER5B|DNA|hAT-Charlie 49032 NM_002623 5203 Hs.91161 NM_002623 ENSG00000101132 PFDN4 C1|PFD4 prefoldin subunit 4 protein-coding chr1-4995 chr1 62800865 62801075 + 12.0 0.000 intron (NM_032852, intron 1 of 10) L2c|LINE|L2 16838 NM_032852 84938 Hs.7353 NM_032852 ENSG00000125703 ATG4C APG4-C|APG4C|AUTL1|AUTL3 autophagy related 4C cysteine peptidase protein-coding chr2-7042 chr2 158308288 158308498 + 12.0 0.000 intron (NM_138803, intron 9 of 13) L3|LINE|CR1 141743 NR_038850 554201 Hs.570262 NR_038850 ENSG00000227480 CCDC148-AS1 - CCDC148 antisense RNA 1 ncRNA chr18-608 chr18 76839450 76839660 + 12.0 0.000 intron (NM_007345, intron 1 of 30) MIRc|SINE|MIR 15395 NM_007345 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr3-5914 chr3 41371463 41371673 + 12.0 0.000 intron (NM_001322500, intron 35 of 35) L1PA7|LINE|L1 172063 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr2-1144 chr2 74715328 74715538 + 12.0 0.000 Intergenic (CGCGG)n|Simple_repeat|Simple_repeat 61186 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr12-4322 chr12 132667904 132668114 + 12.0 0.000 intron (NM_006231, intron 19 of 48) AluJb|SINE|Alu 19515 NM_006231 5426 Hs.524871 NM_006231 ENSG00000177084 POLE CRCS12|FILS|IMAGEI|POLE1 DNA polymerase epsilon, catalytic subunit protein-coding chr5-2279 chr5 39225810 39226020 + 12.0 0.000 intron (NM_001243093, intron 1 of 18) intron (NM_001243093, intron 1 of 18) -6352 NM_199335 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr3-3569 chr3 52448199 52448409 + 12.0 0.000 Intergenic L1MC4a|LINE|L1 -3201 NM_020163 56920 Hs.59729 NM_020163 ENSG00000010319 SEMA3G sem2 semaphorin 3G protein-coding chr12-2493 chr12 78638932 78639142 + 12.0 0.000 Intergenic Intergenic -224945 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr14-1948 chr14 27068530 27068740 + 12.0 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 159993 NR_036193 100423019 NR_036193 ENSG00000265165 MIR4307 - microRNA 4307 ncRNA chr3-1566 chr3 33918549 33918759 + 12.0 0.000 Intergenic Intergenic 120024 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr12-4935 chr12 69371519 69371729 + 12.0 0.000 intron (NM_001300950, intron 4 of 4) L2a|LINE|L2 11881 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding chr1-4977 chr1 56138047 56138257 + 12.0 0.000 Intergenic L1ME3D|LINE|L1 193065 NR_147161 105378738 Hs.121473 NR_147161 ENSG00000233079 LINC01755 - long intergenic non-protein coding RNA 1755 ncRNA chr18-546 chr18 36473720 36473930 + 12.0 0.000 intron (NM_001281740, intron 3 of 28) intron (NM_001281740, intron 3 of 28) 176112 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr1-10373 chr1 155439425 155439635 + 12.0 0.000 intron (NM_018489, intron 4 of 27) AluJr|SINE|Alu 6350 NR_034180 645682 Hs.632482 NR_034180 ENSG00000237872 POU5F1P4 OCT3|OCT4|OTF-3|OTF3|Oct-3|Oct-4|Oct4-pg4|POU5F1|POU5FLC1 POU class 5 homeobox 1 pseudogene 4 pseudo chr6-3625 chr6 114288669 114288879 + 12.0 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -225897 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr3-2174 chr3 184343635 184343845 + 12.0 0.000 intron (NM_001171093, intron 5 of 5) intron (NM_001171093, intron 5 of 5) 4907 NM_001366133 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr14-1541 chr14 61916579 61916789 + 12.0 0.000 intron (NM_001367661, intron 2 of 8) L1MA4|LINE|L1 -11011 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr17-1817 chr17 1792563 1792773 + 12.0 0.000 intron (NM_052928, intron 5 of 10) intron (NM_052928, intron 5 of 10) 20997 NM_001329905 5176 Hs.532768 NM_002615 ENSG00000132386 SERPINF1 EPC-1|OI12|OI6|PEDF|PIG35 serpin family F member 1 protein-coding chr18-1782 chr18 11439345 11439555 + 12.0 0.000 Intergenic MER4A1|LTR|ERV1 -15028 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr2-8790 chr2 167309758 167309968 + 12.0 0.000 Intergenic Intergenic 122491 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr11-1422 chr11 57289030 57289240 + 12.0 0.000 Intergenic Intergenic 35817 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr3-5765 chr3 22846844 22847054 + 12.0 0.000 Intergenic Intergenic 355629 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr6-6104 chr6 151216095 151216305 + 12.0 0.000 intron (NR_125868, intron 1 of 2) intron (NR_125868, intron 1 of 2) 12257 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr1-5164 chr1 164602202 164602412 + 12.0 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 42585 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr8-1941 chr8 50139684 50139894 + 12.0 0.000 intron (NR_135798, intron 1 of 15) intron (NR_135798, intron 1 of 15) -24342 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr5-5779 chr5 174084953 174085163 + 12.0 0.000 intron (NM_015980, intron 3 of 4) intron (NM_015980, intron 3 of 4) 39352 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr5-1919 chr5 173890398 173890608 + 12.0 0.000 exon (NM_001308191, exon 1 of 8) exon (NM_001308191, exon 1 of 8) 2154 NM_001308189 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr21-1178 chr21 42607194 42607404 + 12.0 0.000 intron (NR_131192, intron 1 of 1) intron (NR_131192, intron 1 of 1) 7796 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chr10-3625 chr10 95660543 95660753 + 12.0 0.000 Intergenic Intergenic -3937 NM_001323414 5832 Hs.500645 NM_002860 ENSG00000059573 ALDH18A1 ADCL3|ARCL3A|GSAS|P5CS|PYCS|SPG9|SPG9A|SPG9B aldehyde dehydrogenase 18 family member A1 protein-coding chr11-2813 chr11 120186262 120186472 + 12.0 0.000 Intergenic Intergenic 17390 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chr19-1247 chr19 46936951 46937161 + 12.0 0.000 intron (NM_004491, intron 2 of 6) AluSx1|SINE|Alu 76059 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr10-1471 chr10 103492261 103492471 + 12.0 0.000 intron (NR_120675, intron 3 of 3) intron (NR_120675, intron 3 of 3) -1339 NM_004210 9148 Hs.594708 NM_004210 ENSG00000107954 NEURL1 NEUR1|NEURL|RNF67|bA416N2.1|neu|neu-1 neuralized E3 ubiquitin protein ligase 1 protein-coding chr2-9439 chr2 233653933 233654143 + 12.0 0.000 intron (NM_019075, intron 1 of 4) Ricksha_0|DNA|MULE-MuDR 17561 NM_019075 54575 Hs.554822 NM_019075 ENSG00000242515 UGT1A10 GNT1|UDPGT|UGT-1A|UGT-1J|UGT1|UGT1-01|UGT1-10|UGT1.1|UGT1.10|UGT1A|UGT1A1|UGT1J|hUG-BR1 UDP glucuronosyltransferase family 1 member A10 protein-coding chr6-6619 chr6 150124384 150124594 + 12.0 0.000 Intergenic THE1D|LTR|ERVL-MaLR -18555 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr4-3589 chr4 3168110 3168320 + 12.0 0.000 intron (NM_002111, intron 29 of 66) intron (NM_002111, intron 29 of 66) -76154 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr1-6135 chr1 164588023 164588233 + 12.0 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 28406 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr19-3704 chr19 33617460 33617670 + 12.0 0.000 Intergenic Intergenic -4388 NM_001127896 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr16-4641 chr16 74062557 74062767 + 12.0 0.000 Intergenic L1ME3E|LINE|L1 152859 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr5-2109 chr5 54595848 54596058 + 12.0 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 78194 NM_001102575 112574 Hs.432755 NM_052870 ENSG00000178996 SNX18 SH3PX2|SH3PXD3B|SNAG1 sorting nexin 18 protein-coding chr1-4311 chr1 36479759 36479969 + 12.0 0.000 intron (NM_156039, intron 2 of 16) LTR16E2|LTR|ERVL 3049 NM_172313 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr4-4605 chr4 77168485 77168695 + 12.0 0.000 3' UTR (NM_004354, exon 8 of 8) 3' UTR (NM_004354, exon 8 of 8) 11383 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr1-2923 chr1 31750893 31751103 + 12.0 0.000 intron (NM_001294335, intron 4 of 32) L2c|LINE|L2 7737 NR_036216 100423028 NR_036216 ENSG00000266580 MIR4254 - microRNA 4254 ncRNA chr18-1221 chr18 41644014 41644224 + 12.0 0.000 Intergenic Intergenic -123442 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr16-806 chr16 30957591 30957801 + 12.0 0.000 promoter-TSS (NM_014712) promoter-TSS (NM_014712) -58 NM_014712 9739 Hs.297483 NM_014712 ENSG00000099381 SETD1A KMT2F|Set1|Set1A SET domain containing 1A, histone lysine methyltransferase protein-coding chr5-1084 chr5 56480681 56480891 + 12.0 0.000 intron (NR_104664, intron 1 of 4) CpG 983 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr3-3354 chr3 24156542 24156752 + 12.0 0.000 intron (NM_001354708, intron 4 of 9) intron (NM_001354708, intron 4 of 9) 5323 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr18-1699 chr18 742058 742268 + 12.0 0.000 intron (NM_005433, intron 8 of 11) intron (NM_005433, intron 8 of 11) -29499 NR_148708 55556 Hs.658550 NM_017512 ENSG00000132199 ENOSF1 FUCD|RTS|TYMSAS enolase superfamily member 1 protein-coding chrX-483 chrX 110087683 110087893 + 12.0 0.000 intron (NM_001353850, intron 3 of 7) intron (NM_001353850, intron 3 of 7) 5670 NR_039774 100616491 NR_039774 ENSG00000265584 MIR3978 - microRNA 3978 ncRNA chr1-3799 chr1 15411767 15411977 + 12.0 0.000 intron (NM_024329, intron 1 of 3) intron (NM_024329, intron 1 of 3) 1984 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr5-4804 chr5 57989440 57989650 + 12.0 0.000 Intergenic L4_C_Mam|LINE|RTE-X -90383 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr7-1241 chr7 152847565 152847775 + 12.0 0.000 intron (NM_001350946, intron 8 of 8) intron (NM_001350946, intron 8 of 8) 87918 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr9-1963 chr9 91060671 91060881 + 12.0 0.000 Intergenic Intergenic 14356 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr17-2165 chr17 48724490 48724700 + 12.0 0.000 promoter-TSS (NR_036150) promoter-TSS (NR_036150) -120 NR_036150 100422978 NR_036150 ENSG00000263602 MIR3185 - microRNA 3185 ncRNA chr4-3030 chr4 133270164 133270374 + 12.0 0.000 Intergenic MER57B2|LTR|ERV1 120975 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr9-1317 chr9 135978752 135978962 + 12.0 0.000 Intergenic Intergenic -17484 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr2-2369 chr2 234495079 234495289 + 12.0 0.000 3' UTR (NM_001282431, exon 2 of 2) 3' UTR (NM_001282431, exon 2 of 2) 1865 NM_005737 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr6-5207 chr6 132625793 132626003 + 12.0 0.000 Intergenic L1ME3F|LINE|L1 -1623 NM_001033080 9287 Hs.272382 NM_014626 ENSG00000146378 TAAR2 GPR58|taR-2 trace amine associated receptor 2 (gene/pseudogene) protein-coding chr9-2988 chr9 77305940 77306150 + 12.0 0.000 intron (NM_001018038, intron 34 of 68) intron (NM_001018038, intron 34 of 68) -128128 NR_026668 100286938 Hs.662256 NR_026668 ENSG00000232998 VPS13A-AS1 - VPS13A antisense RNA 1 ncRNA chr2-6298 chr2 62031555 62031765 + 12.0 0.000 intron (NM_001321781, intron 2 of 2) intron (NM_001321781, intron 2 of 2) 126018 NM_152516 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr7-1001 chr7 128361646 128361856 + 12.0 0.000 promoter-TSS (NM_001114726) promoter-TSS (NM_001114726) -61 NM_001114726 401399 Hs.381096 NM_001114726 ENSG00000224940 PRRT4 - proline rich transmembrane protein 4 protein-coding chr4-3148 chr4 181559521 181559731 + 12.0 0.000 Intergenic MIR|SINE|MIR 270347 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr12-2055 chr12 104314041 104314251 + 12.0 0.000 intron (NM_001093771, intron 6 of 16) L2a|LINE|L2 10407 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr2-5656 chr2 197378626 197378836 + 12.0 0.000 Intergenic Intergenic 56362 NM_001308824 23451 Hs.632554 NM_012433 ENSG00000115524 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b subunit 1 protein-coding chr3-5344 chr3 135727593 135727803 + 12.0 0.000 Intergenic L1PA15|LINE|L1 -238030 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr1-4209 chr1 110084600 110084810 + 12.0 0.000 intron (NR_126382, intron 1 of 3) CpG 2017 NR_126382 104355139 Hs.628193 NR_126382 ENSG00000258673 LINC01397 - long intergenic non-protein coding RNA 1397 ncRNA chr3-5902 chr3 39644340 39644550 + 12.0 0.000 Intergenic Intergenic 142379 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr11-3930 chr11 129319204 129319414 + 12.0 0.000 Intergenic Intergenic -36145 NR_145484 399975 NM_207431 LOC399975 - uncharacterized LOC399975 ncRNA chr9-2309 chr9 136754067 136754277 + 12.0 0.000 TTS (NM_001345934) TTS (NM_001345934) 4107 NM_178469 138307 Hs.323991 NM_178469 ENSG00000204001 LCN8 EP17|LCN5 lipocalin 8 protein-coding chr12-2687 chr12 90253877 90254087 + 12.0 0.000 Intergenic Intergenic -39336 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr15-1198 chr15 41989586 41989796 + 12.0 0.000 intron (NM_001206670, intron 14 of 19) intron (NM_001206670, intron 14 of 19) 16928 NR_120334 101928388 Hs.738043 NR_120334 ENSG00000246740 PLA2G4E-AS1 - PLA2G4E antisense RNA 1 ncRNA chr13-1121 chr13 24330779 24330989 + 12.0 0.000 promoter-TSS (NR_131903) promoter-TSS (NR_131903) -566 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr6-1203 chr6 26171920 26172130 + 12.0 0.000 TTS (NM_138720) TTS (NM_138720) -11771 NM_003523 8344 Hs.534369 NM_003523 ENSG00000274290 HIST1H2BE H2B.h|H2B/h|H2BFH|dJ221C16.8 histone cluster 1 H2B family member e protein-coding chr19-2807 chr19 48614006 48614216 + 12.0 0.000 promoter-TSS (NM_017708) promoter-TSS (NM_017708) -674 NM_017708 54854 Hs.165803 NM_017708 ENSG00000105523 FAM83E - family with sequence similarity 83 member E protein-coding chr11-4820 chr11 10379497 10379707 + 12.0 0.000 intron (NR_103765, intron 2 of 3) intron (NR_103765, intron 2 of 3) -70719 NM_001172431 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr1-3084 chr1 26950021 26950231 + 12.0 0.000 exon (NM_152365, exon 4 of 4) exon (NM_152365, exon 4 of 4) 10342 NM_152365 126695 Hs.188881 NM_152365 ENSG00000175707 KDF1 C1orf172|ECTD12 keratinocyte differentiation factor 1 protein-coding chr1-3562 chr1 973940 974150 + 12.0 0.000 exon (NM_001160184, exon 13 of 15) exon (NM_001160184, exon 13 of 15) 7128 NM_001369898 84808 Hs.271462 NM_032722 ENSG00000187642 PERM1 C1orf170 PPARGC1 and ESRR induced regulator, muscle 1 protein-coding chr1-7029 chr1 173095583 173095793 + 12.0 0.000 Intergenic Intergenic -44725 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr20-483 chr20 32819667 32819877 + 12.0 0.000 promoter-TSS (NM_012325) promoter-TSS (NM_012325) -182 NM_012325 22919 Hs.472437 NM_012325 ENSG00000101367 MAPRE1 EB1 microtubule associated protein RP/EB family member 1 protein-coding chr13-2700 chr13 91389039 91389249 + 12.0 0.000 Intergenic Intergenic -9477 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr22-767 chr22 37521645 37521855 + 12.0 0.000 Intergenic Intergenic -2335 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr8-5516 chr8 63045642 63045852 + 12.0 0.000 Intergenic AluSx|SINE|Alu -6941 NM_003878 8836 Hs.78619 NM_003878 ENSG00000137563 GGH GH gamma-glutamyl hydrolase protein-coding chr12-7952 chr12 109645366 109645576 + 12.0 0.000 Intergenic Intergenic -68354 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr2-3199 chr2 217853524 217853734 + 12.0 0.000 intron (NM_001308023, intron 15 of 29) intron (NM_001308023, intron 15 of 29) -19896 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr7-1747 chr7 33888339 33888549 + 12.0 0.000 Intergenic Intergenic -16471 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr1-6400 chr1 10827894 10828104 + 12.0 0.000 Intergenic Intergenic -31353 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr17-3246 chr17 21314120 21314330 + 12.0 0.000 exon (NM_002756, exon 12 of 12) exon (NM_002756, exon 12 of 12) 26189 NM_002756 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr3-5231 chr3 94702882 94703092 + 12.0 0.000 Intergenic Intergenic -235276 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr14-1577 chr14 77261362 77261572 + 12.0 0.000 Intergenic Intergenic -4751 NR_031661 100302236 NR_031661 ENSG00000221754 MIR1260A MIR1260|MIRN1260|hsa-mir-1260|hsa-mir-1260a|mir-1260a microRNA 1260a ncRNA chr6-1462 chr6 15148482 15148692 + 12.0 0.000 Intergenic Intergenic -97482 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr16-4206 chr16 12121309 12121519 + 12.0 0.000 intron (NM_032167, intron 11 of 20) intron (NM_032167, intron 11 of 20) 144680 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr2-13438 chr2 143291107 143291317 + 12.0 0.000 intron (NM_018460, intron 6 of 13) intron (NM_018460, intron 6 of 13) 161793 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr3-2981 chr3 80377948 80378158 + 12.0 0.000 Intergenic L1MCb|LINE|L1 -386844 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr12-3415 chr12 108306046 108306256 + 12.0 0.000 intron (NM_001142344, intron 1 of 2) intron (NM_001142344, intron 1 of 2) 14511 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr14-3386 chr14 94599984 94600194 + 12.0 0.000 Intergenic Intergenic -12302 NM_001085 12 Hs.534293 NM_001085 ENSG00000196136 SERPINA3 AACT|ACT|GIG24|GIG25 serpin family A member 3 protein-coding chr2-7911 chr2 57539835 57540045 + 12.0 0.000 Intergenic Intergenic -367711 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr9-4056 chr9 111118607 111118817 + 12.0 0.000 Intergenic Intergenic -79714 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chrX-861 chrX 141469355 141469565 + 12.0 0.000 Intergenic Intergenic -33389 NR_037183 619455 Hs.590784 NR_037183 ENSG00000277215 SPANXA2-OT1 CXorf18 SPANXA2 overlapping transcript 1 ncRNA chr13-3071 chr13 41363242 41363452 + 12.0 0.000 intron (NM_024561, intron 13 of 19) intron (NM_024561, intron 13 of 19) -51309 NM_001354076 9617 Hs.382176 NM_004294 ENSG00000120662 MTRF1 MRF1|MTTRF1|RF1 mitochondrial translation release factor 1 protein-coding chr1-11438 chr1 71271321 71271531 + 12.0 0.000 Intergenic LTR33A_|LTR|ERVL 190102 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr16-7067 chr16 88795056 88795266 + 12.0 0.000 Intergenic AluSx|SINE|Alu -8628 NM_030928 81620 Hs.122908 NM_030928 ENSG00000167513 CDT1 DUP|RIS2 chromatin licensing and DNA replication factor 1 protein-coding chr19-2296 chr19 3702663 3702873 + 12.0 0.000 Intergenic AluJr|SINE|Alu -2300 NM_001195733 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr3-4469 chr3 48183386 48183596 + 12.0 0.000 intron (NM_201567, intron 4 of 13) AluJb|SINE|Alu 4926 NM_201567 993 Hs.437705 NM_001789 ENSG00000164045 CDC25A CDC25A2 cell division cycle 25A protein-coding chr4-2872 chr4 75264105 75264315 + 12.0 0.000 Intergenic L1PB1|LINE|L1 -89866 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr14-5302 chr14 101163121 101163331 + 12.0 0.000 Intergenic L1MD2|LINE|L1 42370 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr10-3783 chr10 126377111 126377321 + 12.0 0.000 intron (NM_001288974, intron 1 of 18) intron (NM_001288974, intron 1 of 18) 11261 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr9-1960 chr9 86146751 86146961 + 12.0 0.000 intron (NR_110996, intron 4 of 4) HERVH-int|LTR|ERV1 19316 NR_110996 101927623 Hs.575644 NR_110996 LOC101927623 - uncharacterized LOC101927623 ncRNA chr7-4341 chr7 45303564 45303774 + 12.0 0.000 Intergenic Intergenic 145878 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr14-4755 chr14 62374372 62374582 + 12.0 0.000 Intergenic LTR105_Mam|LTR|ERVL -234504 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr14-1992 chr14 51689206 51689416 + 12.0 0.000 intron (NM_001267046, intron 1 of 13) intron (NM_001267046, intron 1 of 13) -27972 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr12-5782 chr12 6952561 6952771 + 12.0 0.000 intron (NM_002831, intron 3 of 15) intron (NM_002831, intron 3 of 15) 1310 NM_002831 5777 Hs.63489 NM_002831 ENSG00000111679 PTPN6 HCP|HCPH|HPTP1C|PTP-1C|SH-PTP1|SHP-1|SHP-1L|SHP1 protein tyrosine phosphatase non-receptor type 6 protein-coding chr4-3550 chr4 177064152 177064362 + 12.0 0.000 Intergenic Intergenic 188555 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr7-3476 chr7 2132733 2132943 + 12.0 0.000 intron (NM_001013837, intron 11 of 18) MSTB1|LTR|ERVL-MaLR -43786 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr4-1773 chr4 1076330 1076540 + 12.0 0.000 intron (NR_159499, intron 2 of 3) intron (NR_159499, intron 2 of 3) 37129 NM_194439 285498 Hs.248290 NM_194439 ENSG00000178222 RNF212 ZHP3 ring finger protein 212 protein-coding chr1-1573 chr1 19800099 19800309 + 12.0 0.000 promoter-TSS (NM_001349115) promoter-TSS (NM_001349115) -288 NM_001349114 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr3-6546 chr3 119605047 119605257 + 12.0 0.000 intron (NM_001293225, intron 1 of 10) intron (NM_001293225, intron 1 of 10) 4881 NM_001293225 51365 Hs.437451 NM_015900 ENSG00000144837 PLA1A PS-PLA1|PSPLA1 phospholipase A1 member A protein-coding chr9-1416 chr9 126398676 126398886 + 12.0 0.000 intron (NM_033446, intron 6 of 9) intron (NM_033446, intron 6 of 9) 11723 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr16-1916 chr16 89530781 89530991 + 12.0 0.000 intron (NM_001363850, intron 7 of 17) intron (NM_001363850, intron 7 of 17) 22483 NM_199367 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7 matrix AAA peptidase subunit, paraplegin protein-coding chr12-3827 chr12 80044953 80045163 + 12.0 0.000 Intergenic Intergenic -54479 NM_001368062 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chrX-1951 chrX 7111242 7111452 + 12.0 0.000 intron (NM_001178135, intron 1 of 3) intron (NM_001178135, intron 1 of 3) -35943 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr9-2739 chr9 96299538 96299748 + 12.0 0.000 intron (NM_000197, intron 1 of 10) MIR|SINE|MIR 2533 NM_000197 3293 Hs.477 NM_000197 ENSG00000130948 HSD17B3 EDH17B3|SDR12C2 hydroxysteroid 17-beta dehydrogenase 3 protein-coding chr2-3592 chr2 69514550 69514760 + 12.0 0.000 exon (NM_014911, exon 13 of 22) exon (NM_014911, exon 13 of 22) 5516 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr1-8947 chr1 8754988 8755198 + 12.0 0.000 intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 62547 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr17-2236 chr17 5283353 5283563 + 12.0 0.000 intron (NM_001291581, intron 1 of 16) intron (NM_001291581, intron 1 of 16) 1174 NM_001291581 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr6-3371 chr6 39631213 39631423 + 12.0 0.000 intron (NM_001289020, intron 5 of 21) L1MD|LINE|L1 94090 NM_001289020 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr16-1639 chr16 11202184 11202394 + 12.0 0.000 Intergenic Intergenic 53893 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr1-2771 chr1 115976596 115976806 + 12.0 0.000 exon (NM_018420, exon 1 of 12) exon (NM_018420, exon 1 of 12) 188 NM_018420 55356 Hs.125482 NM_018420 ENSG00000163393 SLC22A15 FLIPT1|PRO34686 solute carrier family 22 member 15 protein-coding chr16-663 chr16 21158453 21158663 + 12.0 0.000 promoter-TSS (NM_001301769).2 promoter-TSS (NM_001301769).2 -116 NR_125971 57146 Hs.258212 NM_020422 ENSG00000011638 TMEM159 - transmembrane protein 159 protein-coding chr12-1877 chr12 54193970 54194180 + 12.0 0.000 Intergenic Intergenic -5081 NM_001351260 23583 Hs.632721 NM_014311 ENSG00000123415 SMUG1 FDG|HMUDG|UNG3 single-strand-selective monofunctional uracil-DNA glycosylase 1 protein-coding chr8-2900 chr8 143194983 143195193 + 12.0 0.000 Intergenic L1MEg2|LINE|L1 -18130 NM_178172 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr3-2876 chr3 46810818 46811028 + 12.0 0.000 intron (NR_160551, intron 2 of 2) intron (NR_160551, intron 2 of 2) 1651 NR_160551 729756 NR_160551 PRSS44P PRSS44|TESSP-4|TESSP4 serine protease 44, pseudogene pseudo chr8-1088 chr8 17648617 17648827 + 12.0 0.000 intron (NM_001001931, intron 10 of 11) A-rich|Low_complexity|Low_complexity 27779 NM_001330470 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr13-2888 chr13 112764394 112764604 + 12.0 0.000 intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) -9768 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr20-1286 chr20 49187098 49187308 + 12.0 0.000 intron (NM_004602, intron 1 of 13) intron (NM_004602, intron 1 of 13) 1167 NM_001319134 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding chr2-3498 chr2 213901808 213902018 + 12.0 0.000 intron (NR_047660, intron 10 of 14) intron (NR_047660, intron 10 of 14) 143846 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr6-2843 chr6 1296669 1296879 + 12.0 0.000 Intergenic Intergenic -15324 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr5-5290 chr5 124504225 124504435 + 12.0 0.000 Intergenic Intergenic -65810 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr4-781 chr4 169180094 169180304 + 12.0 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 90757 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chrX-2751 chrX 129410989 129411199 + 12.0 0.000 Intergenic L1MB8|LINE|L1 112396 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr11-2620 chr11 8351428 8351638 + 12.0 0.000 Intergenic Intergenic -82746 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr4-1331 chr4 151540893 151541103 + 12.0 0.000 intron (NM_001109977, intron 3 of 13) intron (NM_001109977, intron 3 of 13) 131822 NM_001109977 729830 Hs.633810 NM_001109977 ENSG00000164142 FAM160A1 - family with sequence similarity 160 member A1 protein-coding chr7-2196 chr7 99415559 99415769 + 12.0 0.000 intron (NM_001370410, intron 3 of 5) LTR13|LTR|ERVK 6492 NR_162133 113219453 NR_162133 MIR12119 - microRNA 12119 ncRNA chr4-3652 chr4 24564535 24564745 + 12.0 0.000 intron (NM_001358, intron 3 of 13) intron (NM_001358, intron 3 of 13) 19914 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr10-2630 chr10 87671580 87671790 + 12.0 0.000 intron (NM_001015880, intron 1 of 12) intron (NM_001015880, intron 1 of 12) 11807 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr17-8338 chr17 73504849 73505059 + 12.0 0.000 intron (NM_001144952, intron 2 of 44) intron (NM_001144952, intron 2 of 44) -8729 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr5-1512 chr5 139788507 139788717 + 12.0 0.000 Intergenic Intergenic -7196 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr18-521 chr18 58645553 58645763 + 12.0 0.000 Intergenic HERVH-int|LTR|ERV1 -16567 NM_052947 115701 Hs.628152 NM_052947 ENSG00000198796 ALPK2 HAK alpha kinase 2 protein-coding chr2-3030 chr2 68318453 68318663 + 12.0 0.000 intron (NM_001111101, intron 1 of 2) intron (NM_001111101, intron 1 of 2) 1493 NM_015463 25927 Hs.212885 NM_015463 ENSG00000119865 CNRIP1 C2orf32|CRIP1 cannabinoid receptor interacting protein 1 protein-coding chr18-1854 chr18 24469839 24470049 + 12.0 0.000 intron (NM_021624, intron 2 of 2) L1PA15|LINE|L1 9307 NM_021624 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr5-3158 chr5 68840478 68840688 + 12.0 0.000 Intergenic Arthur1|DNA|hAT-Tip100 189344 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr15-1459 chr15 91228667 91228877 + 12.0 0.000 intron (NM_001323033, intron 2 of 10) intron (NM_001323033, intron 2 of 10) 126976 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr8-4009 chr8 56991490 56991700 + 12.0 0.000 intron (NM_017813, intron 1 of 4) intron (NM_017813, intron 1 of 4) 2272 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr9-3125 chr9 83304633 83304843 + 12.0 0.000 intron (NM_001244960, intron 10 of 13) intron (NM_001244960, intron 10 of 13) 27223 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr17-4359 chr17 15602292 15602502 + 12.0 0.000 intron (NM_006382, intron 7 of 11) L1ME3D|LINE|L1 17307 NM_006382 374286 Hs.548021 NM_006382 ENSG00000241322 CDRT1 C170RF1|C17ORF1|C17ORF1A|FBXW10B|FBXW10P1|HREP|SM25H2 CMT1A duplicated region transcript 1 protein-coding chr1-15428 chr1 153067453 153067663 + 12.0 0.000 Intergenic L1PA13|LINE|L1 4053 NM_001017418 6701 Hs.568239 NM_001017418 ENSG00000196805 SPRR2B - small proline rich protein 2B protein-coding chr1-10036 chr1 88982133 88982343 + 12.0 0.000 3' UTR (NM_001162536, exon 3 of 3) 3' UTR (NM_001162536, exon 3 of 3) 10391 NM_001162536 494115 Hs.481898 NM_019610 ENSG00000213516 RBMXL1 RBM1 RBMX like 1 protein-coding chr1-4361 chr1 109466915 109467125 + 12.0 0.000 intron (NM_001040709, intron 1 of 5) CpG 474 NM_001040709 284612 Hs.528366 NM_001006603 ENSG00000143028 SYPL2 MG29 synaptophysin like 2 protein-coding chr22-905 chr22 26672555 26672765 + 12.0 0.000 promoter-TSS (NR_110543) promoter-TSS (NR_110543) -183 NR_110543 102724827 Hs.642767 NR_110543 MIATNB - MIAT neighbor ncRNA chr20-2148 chr20 37347949 37348159 + 12.0 0.000 intron (NM_198291, intron 1 of 13) intron (NM_198291, intron 1 of 13) 1926 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr15-1889 chr15 72176291 72176501 + 12.0 0.000 intron (NM_001012642, intron 1 of 11) intron (NM_001012642, intron 1 of 11) 21391 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr4-2194 chr4 121675967 121676177 + 12.0 0.000 intron (NM_001154, intron 8 of 12) intron (NM_001154, intron 8 of 12) 20908 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr10-4886 chr10 18325947 18326157 + 12.0 0.000 intron (NM_000724, intron 1 of 12) intron (NM_000724, intron 1 of 12) -14657 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr13-2846 chr13 109132935 109133145 + 12.0 0.000 intron (NM_015011, intron 31 of 34) intron (NM_015011, intron 31 of 34) 34263 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr3-10885 chr3 170233508 170233718 + 12.0 0.000 intron (NM_002740, intron 1 of 17) intron (NM_002740, intron 1 of 17) 11189 NM_002740 5584 Hs.478199 NM_002740 ENSG00000163558 PRKCI DXS1179E|PKCI|nPKC-iota protein kinase C iota protein-coding chr13-2344 chr13 35055945 35056155 + 12.0 0.000 exon (NM_015678, exon 7 of 58) exon (NM_015678, exon 7 of 58) 113763 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr2-2619 chr2 53475582 53475792 + 12.0 0.000 Intergenic Intergenic -292096 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr3-4676 chr3 45366386 45366596 + 12.0 0.000 Intergenic Intergenic -22085 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr2-2420 chr2 37376798 37377008 + 12.0 0.000 Intergenic Intergenic 32273 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr2-3821 chr2 26169722 26169932 + 12.0 0.000 Intergenic Intergenic -3261 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr18-923 chr18 68475945 68476155 + 12.0 0.000 Intergenic Intergenic 239058 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr5-1643 chr5 164337017 164337227 + 12.0 0.000 Intergenic Intergenic 130280 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr11-2825 chr11 126929693 126929903 + 12.0 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -10948 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr22-1349 chr22 24474268 24474478 + 12.0 0.000 intron (NR_028483, intron 2 of 7) intron (NR_028483, intron 2 of 7) 20701 NR_028483 646023 Hs.632761 NM_001039784 ENSG00000178803 ADORA2A-AS1 C22orf45 ADORA2A antisense RNA 1 ncRNA chr4-5076 chr4 146029028 146029238 + 12.0 0.000 Intergenic Intergenic -90310 NM_001306215 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr16-1112 chr16 89187395 89187605 + 12.0 0.000 exon (NM_004933, exon 6 of 14) exon (NM_004933, exon 6 of 14) 13037 NM_001366322 146429 Hs.447544 NM_001242757 ENSG00000259803 SLC22A31 - solute carrier family 22 member 31 protein-coding chr15-1629 chr15 88683754 88683964 + 12.0 0.000 Intergenic Intergenic 44843 NM_001303236 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr3-3053 chr3 126319886 126320096 + 12.0 0.000 Intergenic Intergenic 37417 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr12-2588 chr12 117065060 117065270 + 12.0 0.000 intron (NR_031766, intron 2 of 7) L2a|LINE|L2 34251 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr5-1787 chr5 43007865 43008075 + 12.0 0.000 Intergenic MER61D|LTR|ERV1 10841 NR_034085 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA chr12-2121 chr12 78726540 78726750 + 12.0 0.000 Intergenic L4_C_Mam|LINE|RTE-X -137337 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr1-3583 chr1 6486520 6486730 + 12.0 0.000 promoter-TSS (NM_001042665) promoter-TSS (NM_001042665) -671 NM_001042665 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr7-880 chr7 128352194 128352404 + 12.0 0.000 exon (NM_001174164, exon 6 of 6) exon (NM_001174164, exon 6 of 6) -8391 NM_001166135 55131 Hs.274263 NM_018077 ENSG00000106344 RBM28 ANES RNA binding motif protein 28 protein-coding chr5-1535 chr5 172283093 172283303 + 12.0 0.000 intron (NM_152277, intron 1 of 2) CpG 566 NM_152277 92181 Hs.131570 NM_152277 ENSG00000168246 UBTD2 DCUBP ubiquitin domain containing 2 protein-coding chr16-1705 chr16 10961454 10961664 + 12.0 0.000 intron (NM_015226, intron 2 of 22) intron (NM_015226, intron 2 of 22) 16995 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr19-1345 chr19 29665154 29665364 + 12.0 0.000 promoter-TSS (NM_024310) promoter-TSS (NM_024310) -202 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr11-6120 chr11 38543407 38543617 + 12.0 0.000 Intergenic Intergenic 102844 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA chr12-2354 chr12 9588794 9589004 + 12.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 19017 NM_002258 3820 Hs.169824 NM_002258 ENSG00000111796 KLRB1 CD161|CLEC5B|NKR|NKR-P1|NKR-P1A|NKRP1A|hNKR-P1A killer cell lectin like receptor B1 protein-coding chr8-4609 chr8 131132485 131132695 + 12.0 0.000 Intergenic MIRb|SINE|MIR -91681 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr4-2033 chr4 3513573 3513783 + 12.0 0.000 intron (NM_002337, intron 7 of 7) intron (NM_002337, intron 7 of 7) 18471 NR_110005 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr10-1763 chr10 31395544 31395754 + 12.0 0.000 intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) 4106 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chrX-2768 chrX 130399193 130399403 + 12.0 0.000 Intergenic L2|LINE|L2 -2689 NM_016024 51634 Hs.740515 NM_016024 ENSG00000134597 RBMX2 CGI-79|Snu17 RNA binding motif protein X-linked 2 protein-coding chr11-5761 chr11 3714141 3714351 + 12.0 0.000 intron (NR_157590, intron 18 of 31) intron (NR_157590, intron 18 of 31) -42862 NM_020402 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr3-9022 chr3 21246059 21246269 + 12.0 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -159562 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr7-2368 chr7 22292113 22292323 + 12.0 0.000 intron (NM_012294, intron 5 of 25) intron (NM_012294, intron 5 of 25) 64936 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr7-4318 chr7 33157614 33157824 + 12.0 0.000 intron (NM_198428, intron 4 of 22) intron (NM_198428, intron 4 of 22) 28155 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr1-9597 chr1 44584232 44584442 + 12.0 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 38844 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr17-2887 chr17 39393868 39394078 + 12.0 0.000 intron (NM_001370209, intron 1 of 13) intron (NM_001370209, intron 1 of 13) 7653 NM_001184906 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr5-4163 chr5 98483546 98483756 + 12.0 0.000 Intergenic MIRc|SINE|MIR -284981 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr9-4949 chr9 15533017 15533227 + 12.0 0.000 Intergenic AluSq|SINE|Alu -19921 NM_173550 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr8-3710 chr8 19922118 19922328 + 12.0 0.000 Intergenic L1MB4|LINE|L1 -17030 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr5-3460 chr5 163649694 163649904 + 12.0 0.000 Intergenic MER54B|LTR|ERVL 144180 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr12-5163 chr12 102427767 102427977 + 12.0 0.000 intron (NM_000618, intron 2 of 3) intron (NM_000618, intron 2 of 3) 50678 NM_001111284 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr11-3058 chr11 9601549 9601759 + 12.0 0.000 Intergenic Intergenic 26967 NM_001143976 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr3-4197 chr3 130906641 130906851 + 12.0 0.000 intron (NM_001001485, intron 2 of 27) L1ME1|LINE|L1 12156 NM_001001487 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr1-10074 chr1 93603253 93603463 + 12.0 0.000 intron (NM_001261409, intron 3 of 11) MER91B|DNA|hAT-Tip100 10739 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr19-1821 chr19 3406749 3406959 + 12.0 0.000 intron (NM_001245002, intron 2 of 10) L2a|LINE|L2 40271 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr6-4156 chr6 478135 478345 + 12.0 0.000 Intergenic Intergenic 86488 NM_001195286 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr5-1474 chr5 88268817 88269027 + 12.0 0.000 promoter-TSS (NM_153354) promoter-TSS (NM_153354) 40 NR_039995 100505894 Hs.559426 NR_039993 ENSG00000247828 TMEM161B-AS1 linc-POLR3G-8 TMEM161B antisense RNA 1 ncRNA chr6-3543 chr6 43417741 43417951 + 12.0 0.000 Intergenic Intergenic -9695 NM_001198934 89845 Hs.55879 NM_033450 ENSG00000124574 ABCC10 EST182763|MRP7|SIMRP7 ATP binding cassette subfamily C member 10 protein-coding chr7-2048 chr7 106862764 106862974 + 12.0 0.000 Intergenic Intergenic -2413 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chrX-431 chrX 47623726 47623936 + 12.0 0.000 TTS (NM_002621) TTS (NM_002621) -3974 NM_133499 6853 Hs.225936 NM_006950 ENSG00000008056 SYN1 SYN1a|SYN1b|SYNI synapsin I protein-coding chr9-4727 chr9 128414918 128415128 + 12.0 0.000 intron (NR_031672, intron 2 of 2).4 L2b|LINE|L2 -4137 NM_001286760 51148 Hs.495230 NM_016174 ENSG00000167123 CERCAM CEECAM1|GLT25D3 cerebral endothelial cell adhesion molecule protein-coding chr7-1467 chr7 101202059 101202269 + 12.0 0.000 Intergenic CpG -1128 NM_178176 346606 Hs.512217 NM_178176 ENSG00000106384 MOGAT3 DC7|DGAT2L2|MGAT3 monoacylglycerol O-acyltransferase 3 protein-coding chr9-4217 chr9 68673204 68673414 + 12.0 0.000 Intergenic MIR|SINE|MIR -31931 NM_003558 8395 Hs.534371 NM_003558 ENSG00000107242 PIP5K1B MSS4|STM7 phosphatidylinositol-4-phosphate 5-kinase type 1 beta protein-coding chr3-6237 chr3 66833951 66834161 + 12.0 0.000 Intergenic MSTA|LTR|ERVL-MaLR -95720 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr16-2415 chr16 72498414 72498624 + 12.0 0.000 intron (NR_159371, intron 3 of 5) LTR78|LTR|ERV1 166451 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr5-490 chr5 43556690 43556900 + 12.0 0.000 exon (NM_006451, exon 1 of 11) exon (NM_006451, exon 1 of 11) 282 NM_006451 10605 Hs.482038 NM_006451 ENSG00000172239 PAIP1 - poly(A) binding protein interacting protein 1 protein-coding chr4-4781 chr4 101037967 101038177 + 12.0 0.000 intron (NM_001130691, intron 11 of 12) MIRb|SINE|MIR 202800 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr15-1591 chr15 76312698 76312908 + 12.0 0.000 Intergenic L2a|LINE|L2 -1334 NM_000126 2108 Hs.39925 NM_000126 ENSG00000140374 ETFA EMA|GA2|MADD electron transfer flavoprotein subunit alpha protein-coding chr16-1003 chr16 51152151 51152361 + 12.0 0.000 promoter-TSS (NM_002968) promoter-TSS (NM_002968) -984 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr10-2046 chr10 87214807 87215017 + 12.0 0.000 Intergenic AluSc|SINE|Alu -10536 NM_001099338 728118 Hs.710565 NM_001099338 ENSG00000184923 NUTM2A FAM22A NUT family member 2A protein-coding chr6-5737 chr6 151293015 151293225 + 12.0 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) -32411 NM_144497 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr21-513 chr21 34346131 34346341 + 12.0 0.000 Intergenic Intergenic -17788 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr9-3708 chr9 110127081 110127291 + 12.0 0.000 intron (NM_001136562, intron 1 of 3) intron (NM_001136562, intron 1 of 3) 1685 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr12-2506 chr12 84950264 84950474 + 12.0 0.000 Intergenic L1PA15|LINE|L1 -37540 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr1-9998 chr1 84494617 84494827 + 12.0 0.000 intron (NM_025065, intron 5 of 8) intron (NM_025065, intron 5 of 8) -11664 NM_001310156 100505741 Hs.584956 NM_022354 ENSG00000122432 SPATA1 SP-2|SPAP1 spermatogenesis associated 1 protein-coding chr7-5341 chr7 28635002 28635212 + 12.0 0.000 intron (NM_182899, intron 4 of 9) intron (NM_182899, intron 4 of 9) -51026 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr6-4561 chr6 42261815 42262025 + 12.0 0.000 intron (NM_033502, intron 8 of 17) intron (NM_033502, intron 8 of 17) -44059 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr8-4189 chr8 81720564 81720774 + 12.0 0.000 intron (NR_033195, intron 1 of 6) intron (NR_033195, intron 1 of 6) 631 NM_024699 79752 Hs.655453 NM_024699 ENSG00000104231 ZFAND1 - zinc finger AN1-type containing 1 protein-coding chr3-2164 chr3 149621425 149621635 + 12.0 0.000 intron (NM_001348362, intron 5 of 9) intron (NM_001348362, intron 5 of 9) 36495 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr11-1742 chr11 117907364 117907574 + 12.0 0.000 TTS (NM_001206790) TTS (NM_001206790) 21933 NM_001244995 84000 Hs.266308 NM_032046 ENSG00000137747 TMPRSS13 MSP|MSPL|MSPS|TMPRSS11 transmembrane serine protease 13 protein-coding chr7-1904 chr7 1321861 1322071 + 12.0 0.000 Intergenic Intergenic 89094 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr10-2197 chr10 30058661 30058871 + 12.0 0.000 intron (NM_001350021, intron 1 of 4) CpG 820 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr1-10909 chr1 208758524 208758734 + 12.0 0.000 Intergenic CR1_Mam|LINE|CR1 29941 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr18-1521 chr18 7872731 7872941 + 12.0 0.000 intron (NM_002845, intron 2 of 30) intron (NM_002845, intron 2 of 30) 305520 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr5-2364 chr5 80059357 80059567 + 12.0 0.000 exon (NM_003248, exon 6 of 22) exon (NM_003248, exon 6 of 22) 23439 NM_001306214 7060 Hs.211426 NM_003248 ENSG00000113296 THBS4 TSP-4|TSP4 thrombospondin 4 protein-coding chr14-4658 chr14 55025862 55026072 + 12.0 0.000 intron (NM_001008396, intron 1 of 24) L2c|LINE|L2 1132 NM_007086 11169 Hs.385998 NM_007086 ENSG00000198554 WDHD1 AND-1|AND1|CHTF4|CTF4 WD repeat and HMG-box DNA binding protein 1 protein-coding chr8-3724 chr8 21705463 21705673 + 12.0 0.000 intron (NM_001495, intron 5 of 8) MIRb|SINE|MIR 83307 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr14-574 chr14 75234479 75234689 + 12.0 0.000 Intergenic Intergenic -44244 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr7-5248 chr7 18013963 18014173 + 12.0 0.000 Intergenic LTR26|LTR|ERV1 13778 NM_175886 221823 Hs.169284 NM_175886 ENSG00000229937 PRPS1L1 PRPS1|PRPS3|PRPSL|PRS-III phosphoribosyl pyrophosphate synthetase 1 like 1 protein-coding chr1-11122 chr1 232075437 232075647 + 12.0 0.000 Intergenic L1MEc|LINE|L1 149708 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr7-1495 chr7 140035440 140035650 + 12.0 0.000 intron (NR_130117, intron 6 of 10) LTR82A|LTR|ERVL 28176 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr1-16496 chr1 229695525 229695735 + 12.0 0.000 Intergenic Intergenic 69383 NM_014777 9816 Hs.533628 NM_014777 ENSG00000135763 URB2 KIAA0133|NET10|NPA2 URB2 ribosome biogenesis homolog protein-coding chr17-6072 chr17 80019847 80020057 + 12.0 0.000 intron (NM_019020, intron 1 of 11) MLT1B|LTR|ERVL-MaLR 15920 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr13-3137 chr13 85529341 85529551 + 12.0 0.000 intron (NR_046989, intron 1 of 3) intron (NR_046989, intron 1 of 3) 165843 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr6-5130 chr6 122338942 122339152 + 12.0 0.000 Intergenic Intergenic -60504 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr20-1514 chr20 37041889 37042099 + 12.0 0.000 intron (NM_002895, intron 13 of 21) AluYh3|SINE|Alu 54003 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr15-2613 chr15 65420879 65421089 + 12.0 0.000 intron (NM_020962, intron 1 of 19) L2b|LINE|L2 1963 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr14-3289 chr14 83871052 83871262 + 12.0 0.000 Intergenic Intergenic 1228525 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr9-1693 chr9 95131565 95131775 + 12.0 0.000 intron (NM_001243744, intron 8 of 13) intron (NM_001243744, intron 8 of 13) -45576 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr5-2273 chr5 36392816 36393026 + 12.0 0.000 Intergenic Intergenic -91019 NM_001323273 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr3-6352 chr3 83624293 83624503 + 12.0 0.000 Intergenic L1PA6|LINE|L1 1245177 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr10-4772 chr10 4808235 4808445 + 12.0 0.000 Intergenic Intergenic -17837 NR_073127 83592 Hs.657944 NM_031436 ENSG00000165568 AKR1E2 AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR aldo-keto reductase family 1 member E2 protein-coding chr1-4280 chr1 12605068 12605278 + 12.0 0.000 intron (NM_004753, intron 1 of 5) intron (NM_004753, intron 1 of 5) -8560 NM_001324370 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding chr13-1300 chr13 63433900 63434110 + 12.0 0.000 Intergenic Intergenic -105911 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr16-3156 chr16 76682961 76683171 + 12.0 0.000 Intergenic MER21B|LTR|ERVL 48068 NR_110934 101928203 Hs.737035 NR_110934 ENSG00000250514 LINC02125 - long intergenic non-protein coding RNA 2125 ncRNA chr1-10442 chr1 159869759 159869969 + 12.0 0.000 Intergenic Intergenic -7207 NM_001013661 391123 Hs.647718 NM_001013661 ENSG00000243284 VSIG8 - V-set and immunoglobulin domain containing 8 protein-coding chr5-7027 chr5 159181298 159181508 + 12.0 0.000 intron (NM_001199383, intron 4 of 10) LTR78|LTR|ERV1 26245 NM_001199382 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chrX-801 chrX 65881046 65881256 + 12.0 0.000 Intergenic Intergenic -137719 NR_029637 407008 NR_029637 ENSG00000284567 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA chr2-6443 chr2 156400902 156401112 + 12.0 0.000 Intergenic Intergenic -34545 NM_001083112 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr9-8252 chr9 111255050 111255260 + 12.0 0.000 Intergenic THE1C|LTR|ERVL-MaLR 16059 NR_106989 102465800 NR_106989 ENSG00000274263 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA chr1-5364 chr1 240598389 240598599 + 12.0 0.000 intron (NM_022469, intron 1 of 1) intron (NM_022469, intron 1 of 1) 13661 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr2-2504 chr2 162025772 162025982 + 12.0 0.000 intron (NM_001935, intron 10 of 25) intron (NM_001935, intron 10 of 25) 48338 NM_001935 1803 Hs.368912 NM_001935 ENSG00000197635 DPP4 ADABP|ADCP2|CD26|DPPIV|TP103 dipeptidyl peptidase 4 protein-coding chr11-4355 chr11 73439174 73439384 + 12.0 0.000 intron (NM_001286051, intron 2 of 5) intron (NM_001286051, intron 2 of 5) 62611 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr13-2385 chr13 41560075 41560285 + 12.0 0.000 Intergenic Intergenic 8215 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr3-8381 chr3 95221542 95221752 + 12.0 0.000 Intergenic L1PA10|LINE|L1 283384 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr8-2054 chr8 119715198 119715408 + 12.0 0.000 Intergenic L1MB8|LINE|L1 -41913 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr12-2407 chr12 46915185 46915395 + 12.0 0.000 Intergenic Intergenic -89293 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr12-1902 chr12 70828491 70828701 + 12.0 0.000 intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) -39676 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr9-3492 chr9 16028657 16028867 + 12.0 0.000 Intergenic LTR16B2|LTR|ERVL 224345 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr19-1195 chr19 48738849 48739059 + 12.0 0.000 intron (NM_017805, intron 3 of 11) CpG 1656 NM_017805 54922 Hs.233955 NM_017805 ENSG00000105538 RASIP1 RAIN Ras interacting protein 1 protein-coding chr11-4462 chr11 102868341 102868551 + 12.0 0.000 intron (NM_002426, intron 4 of 9) intron (NM_002426, intron 4 of 9) 6536 NM_002426 4321 Hs.1695 NM_002426 ENSG00000262406 MMP12 HME|ME|MME|MMP-12 matrix metallopeptidase 12 protein-coding chr5-2665 chr5 17810943 17811153 + 12.0 0.000 intron (NR_134286, intron 1 of 7) intron (NR_134286, intron 1 of 7) 3774 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr17-2390 chr17 79127271 79127481 + 12.0 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 52439 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr8-2085 chr8 130046777 130046987 + 12.0 0.000 Intergenic Intergenic -29753 NM_001353245 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr12-2293 chr12 113075014 113075224 + 12.0 0.000 intron (NM_004416, intron 1 of 8) intron (NM_004416, intron 1 of 8) 17262 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 RNF140|hDx-1 deltex E3 ubiquitin ligase 1 protein-coding chr3-3261 chr3 58012621 58012831 + 12.0 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 4304 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr3-1049 chr3 195909137 195909347 + 12.0 0.000 promoter-TSS (NM_005781) promoter-TSS (NM_005781) -233 NM_005781 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr5-4251 chr5 136334717 136334927 + 12.0 0.000 intron (NM_020389, intron 2 of 11) intron (NM_020389, intron 2 of 11) 30654 NM_001167577 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr17-3149 chr17 49456232 49456442 + 12.0 0.000 Intergenic L2a|LINE|L2 5412 NR_110805 101927207 Hs.638402 NR_110805 ENSG00000249497 LINC02075 - long intergenic non-protein coding RNA 2075 ncRNA chr5-4425 chr5 1179797 1180007 + 12.0 0.000 Intergenic Intergenic -1297 NR_109911 101928857 Hs.593732 NR_109911 ENSG00000249201 CTD-3080P12.3 - uncharacterized LOC101928857 ncRNA chr10-2460 chr10 18180107 18180317 + 12.0 0.000 intron (NM_201593, intron 2 of 13) intron (NM_201593, intron 2 of 13) 39788 NM_201572 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr3-2213 chr3 26437758 26437968 + 12.0 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -184943 NM_052953 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr7-1458 chr7 90596354 90596564 + 12.0 0.000 5' UTR (NM_001287135, exon 1 of 15) 5' UTR (NM_001287135, exon 1 of 15) 138 NM_001287135 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr3-6832 chr3 148158302 148158512 + 12.0 0.000 Intergenic MER44C|DNA|TcMar-Tigger 80248 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr7-5059 chr7 1874018 1874228 + 12.0 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) -29870 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr10-5636 chr10 96683182 96683392 + 12.0 0.000 intron (NM_152309, intron 2 of 16) intron (NM_152309, intron 2 of 16) 37227 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr2-4231 chr2 219014123 219014333 + 12.0 0.000 non-coding (NR_046086, exon 3 of 3) non-coding (NR_046086, exon 3 of 3) 12013 NR_046086 100129175 Hs.147762 NR_046086 ENSG00000224090 LOC100129175 - uncharacterized LOC100129175 ncRNA chr22-2002 chr22 27913861 27914071 + 12.0 0.000 intron (NM_001284278, intron 2 of 11) L3|LINE|CR1 5248 NM_001284278 23760 Hs.705323 NM_012399 ENSG00000180957 PITPNB PI-TP-beta|PtdInsTP|VIB1B phosphatidylinositol transfer protein beta protein-coding chr4-1592 chr4 22501438 22501648 + 12.0 0.000 intron (NM_145290, intron 1 of 18) intron (NM_145290, intron 1 of 18) -13769 NR_162129 113219450 NR_162129 MIR12115 - microRNA 12115 ncRNA chrX-1811 chrX 94512162 94512372 + 12.0 0.000 Intergenic MER67B|LTR|ERV1 550959 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr3-2698 chr3 59480622 59480832 + 12.0 0.000 Intergenic Intergenic 177770 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr8-1568 chr8 124147117 124147327 + 12.0 0.000 intron (NR_103547, intron 1 of 4) intron (NR_103547, intron 1 of 4) 24300 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr6-1367 chr6 70790538 70790748 + 12.0 0.000 intron (NM_021940, intron 4 of 9) intron (NM_021940, intron 4 of 9) 122113 NM_001281440 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr7-3629 chr7 41336701 41336911 + 12.0 0.000 Intergenic Intergenic 235202 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr21-1044 chr21 26508950 26509160 + 12.0 0.000 intron (NR_135516, intron 3 of 3) L2a|LINE|L2 64231 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr9-4234 chr9 79176427 79176637 + 12.0 0.000 Intergenic Intergenic -30866 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr12-2538 chr12 100793408 100793618 + 12.0 0.000 Intergenic Intergenic -1263 NM_001286615 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr17-811 chr17 12020705 12020915 + 12.0 0.000 promoter-TSS (NM_003010) promoter-TSS (NM_003010) -67 NM_001281435 6416 Hs.514681 NM_003010 ENSG00000065559 MAP2K4 JNKK|JNKK1|MAPKK4|MEK4|MKK4|PRKMK4|SAPKK-1|SAPKK1|SEK1|SERK1|SKK1 mitogen-activated protein kinase kinase 4 protein-coding chr13-1358 chr13 71963523 71963733 + 12.0 0.000 Intergenic Intergenic -96424 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr6-1300 chr6 169232556 169232766 + 12.0 0.000 intron (NM_003247, intron 13 of 22) CpG-24280 19449 NR_134621 101929523 Hs.442696 NR_134621 ENSG00000226445 LOC101929523 - uncharacterized LOC101929523 ncRNA chr1-2385 chr1 151680915 151681125 + 12.0 0.000 intron (NM_030918, intron 7 of 11) intron (NM_030918, intron 7 of 11) 35783 NM_007185 11189 Hs.26047 NM_007185 ENSG00000159409 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP Elav-like family member 3 protein-coding chrX-4517 chrX 66385086 66385296 + 12.0 0.000 Intergenic Intergenic 217441 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr1-3309 chr1 8381760 8381970 + 12.0 0.000 intron (NM_001042681, intron 12 of 22) intron (NM_001042681, intron 12 of 22) 41967 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr2-7994 chr2 66751717 66751927 + 12.0 0.000 Intergenic Intergenic -48595 NR_110264 101927577 Hs.380543 NR_110264 ENSG00000237179 LINC01797 - long intergenic non-protein coding RNA 1797 ncRNA chr6-2831 chr6 162693324 162693534 + 12.0 0.000 intron (NM_004562, intron 1 of 11) intron (NM_004562, intron 1 of 11) -33703 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr8-6343 chr8 51828196 51828406 + 12.0 0.000 intron (NM_001363193, intron 5 of 5) intron (NM_001363193, intron 5 of 5) -18856 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr9-4896 chr9 6408714 6408924 + 12.0 0.000 Intergenic Intergenic -4332 NR_046386 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr8-3800 chr8 27859995 27860205 + 12.0 0.000 Intergenic L1ME1|LINE|L1 -22283 NM_018492 55872 Hs.104741 NM_018492 ENSG00000168078 PBK CT84|HEL164|Nori-3|SPK|TOPK PDZ binding kinase protein-coding chr16-1129 chr16 67278878 67279088 + 12.0 0.000 promoter-TSS (NM_001129728) promoter-TSS (NM_001129728) -164 NM_001129728 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding chr3-2344 chr3 143241564 143241774 + 12.0 0.000 Intergenic Intergenic -100577 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr10-3985 chr10 124838525 124838735 + 12.0 0.000 Intergenic L1ME4a|LINE|L1 36811 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr3-939 chr3 126961248 126961458 + 12.0 0.000 TTS (NM_001320610) TTS (NM_001320610) -27241 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr1-6185 chr1 203526554 203526764 + 12.0 0.000 Intergenic Intergenic 32506 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr6-2249 chr6 52598261 52598471 + 12.0 0.000 Intergenic Intergenic 21068 NR_103447 401264 Hs.544586 NR_103446 ENSG00000225791 TRAM2-AS1 - TRAM2 antisense RNA 1 (head to head) ncRNA chr1-1707 chr1 9128727 9128937 + 12.0 0.000 exon (NM_024980, exon 1 of 4) exon (NM_024980, exon 1 of 4) 270 NM_024980 80045 Hs.632367 NM_024980 ENSG00000180758 GPR157 - G protein-coupled receptor 157 protein-coding chr16-1903 chr16 88472335 88472545 + 12.0 0.000 intron (NM_153813, intron 1 of 9) AluSc|SINE|Alu 3522 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr9-1283 chr9 16267659 16267869 + 12.0 0.000 intron (NM_001364979, intron 1 of 3) intron (NM_001364979, intron 1 of 3) 8549 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr20-1077 chr20 34927411 34927621 + 12.0 0.000 TTS (NM_001322495) TTS (NM_001322495) 28119 NM_001322495 2937 Hs.82327 NM_000178 ENSG00000100983 GSS GSHS|HEL-S-64p|HEL-S-88n glutathione synthetase protein-coding chr2-4843 chr2 78882876 78883086 + 12.0 0.000 Intergenic Intergenic -142721 NM_198448 130120 Hs.447084 NM_198448 ENSG00000143954 REG3G LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429 regenerating family member 3 gamma protein-coding chr8-1774 chr8 66432241 66432451 + 12.0 0.000 promoter-TSS (NM_144650) promoter-TSS (NM_144650) -158 NM_144650 137872 Hs.720023 NM_144650 ENSG00000147576 ADHFE1 ADH8|HMFT2263|HOT alcohol dehydrogenase iron containing 1 protein-coding chr5-2335 chr5 67215809 67216019 + 12.0 0.000 Intergenic Intergenic -19115 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr5-2706 chr5 95686702 95686912 + 12.0 0.000 intron (NM_001349303, intron 5 of 8) LTR88b|LTR|Gypsy? -3797 NR_125328 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr6-7007 chr6 21886948 21887158 + 12.0 0.000 intron (NR_015410, intron 4 of 11) L2|LINE|L2 220640 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chrX-4690 chrX 85589475 85589685 + 12.0 0.000 Intergenic Intergenic -209915 NM_001307940 79983 Hs.267038 NM_024921 ENSG00000124429 POF1B POF|POF2B POF1B actin binding protein protein-coding chr11-1139 chr11 78417927 78418137 + 12.0 0.000 promoter-TSS (NM_080491) promoter-TSS (NM_080491) -212 NM_080491 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr16-745 chr16 88835859 88836069 + 12.0 0.000 intron (NM_001323544, intron 7 of 14) CpG -20256 NR_134671 51693 Hs.461722 NM_016209 ENSG00000167515 TRAPPC2L HSPC176|PERRB trafficking protein particle complex 2 like protein-coding chr5-3846 chr5 122638347 122638557 + 12.0 0.000 intron (NR_109881, intron 11 of 11) intron (NR_109881, intron 11 of 11) -53852 NR_134281 101927357 Hs.639856 NR_134281 LOC101927357 - uncharacterized LOC101927357 ncRNA chr8-3292 chr8 23218785 23218995 + 12.0 0.000 intron (NM_003844, intron 1 of 9) MIR|SINE|MIR 6212 NM_003844 8797 Hs.213467 NM_003844 ENSG00000104689 TNFRSF10A APO2|CD261|DR4|TRAILR-1|TRAILR1 TNF receptor superfamily member 10a protein-coding chr1-3105 chr1 39105479 39105689 + 12.0 0.000 intron (NM_012090, intron 1 of 92) CpG 21417 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr2-10877 chr2 65620332 65620542 + 12.0 0.000 Intergenic MIRc|SINE|MIR -187838 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr13-1186 chr13 44975455 44975665 + 12.0 0.000 intron (NM_012345, intron 5 of 9) L2|LINE|L2 13911 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 nuclear FMR1 interacting protein 1 protein-coding chr10-1786 chr10 79323366 79323576 + 12.0 0.000 Intergenic Intergenic -23998 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr4-4757 chr4 98642071 98642281 + 12.0 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 16435 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr15-4746 chr15 69139342 69139552 + 12.0 0.000 Intergenic Intergenic -21150 NM_001324091 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr9-5845 chr9 130296435 130296645 + 12.0 0.000 intron (NM_001291815, intron 6 of 97) intron (NM_001291815, intron 6 of 97) 30780 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr9-4605 chr9 104797483 104797693 + 12.0 0.000 intron (NM_005502, intron 37 of 49) L3|LINE|CR1 33459 NR_130760 55335 Hs.429294 NM_018376 ENSG00000165028 NIPSNAP3B FP944|NIPSNAP3|SNAP1 nipsnap homolog 3B protein-coding chr13-2507 chr13 56984684 56984894 + 12.0 0.000 Intergenic MLT2B1|LTR|ERVL -156129 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr4-4817 chr4 107539550 107539760 + 12.0 0.000 Intergenic Intergenic 180579 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr2-14370 chr2 219126033 219126243 + 12.0 0.000 intron (NM_024782, intron 5 of 7) intron (NM_024782, intron 5 of 7) 34727 NM_024782 79840 Hs.225988 NM_024782 ENSG00000187736 NHEJ1 XLF non-homologous end joining factor 1 protein-coding chr7-1650 chr7 55211828 55212038 + 12.0 0.000 TTS (NM_001346900) TTS (NM_001346900) -22984 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr13-596 chr13 29743219 29743429 + 12.0 0.000 Intergenic Intergenic 95631 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chr18-912 chr18 59423234 59423444 + 12.0 0.000 Intergenic Intergenic -64074 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr17-4148 chr17 82538475 82538685 + 12.0 0.000 intron (NM_004514, intron 1 of 8) intron (NM_004514, intron 1 of 8) 18848 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr9-2131 chr9 109349431 109349641 + 12.0 0.000 Intergenic Intergenic -28572 NM_019114 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr15-2897 chr15 42805587 42805797 + 12.0 0.000 intron (NM_173500, intron 9 of 14) MLT1J2|LTR|ERVL-MaLR -68564 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr11-2290 chr11 26222714 26222924 + 12.0 0.000 intron (NM_001313726, intron 1 of 27) MSTB-int|LTR|ERVL-MaLR 33696 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr5-3265 chr5 107615632 107615842 + 12.0 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 55200 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr5-1392 chr5 132103570 132103780 + 12.0 0.000 Intergenic Intergenic 29886 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 CSF|GMCSF colony stimulating factor 2 protein-coding chr16-3493 chr16 4190738 4190948 + 12.0 0.000 3' UTR (NM_001323668, exon 7 of 7) 3' UTR (NM_001323668, exon 7 of 7) 51237 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr4-2230 chr4 146879872 146880082 + 12.0 0.000 intron (NR_133922, intron 6 of 13) intron (NR_133922, intron 6 of 13) 65887 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr10-2613 chr10 79013894 79014104 + 12.0 0.000 intron (NR_015429, intron 3 of 7) MIRc|SINE|MIR 53449 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr7-3620 chr7 36448793 36449003 + 12.0 0.000 intron (NM_001284302, intron 21 of 22) L1ME4b|LINE|L1 -58541 NM_001100425 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr12-5032 chr12 86435074 86435284 + 12.0 0.000 5' UTR (NM_001351285, exon 4 of 9) 5' UTR (NM_001351285, exon 4 of 9) -177880 NM_001351287 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding chr8-4196 chr8 83431001 83431211 + 12.0 0.000 Intergenic Intergenic 27348 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr2-4303 chr2 235059046 235059256 + 12.0 0.000 Intergenic Intergenic 31416 NM_001371306 chr12-4140 chr12 75488651 75488861 + 12.0 0.000 intron (NM_006851, intron 2 of 5) L2b|LINE|L2 8001 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr5-4340 chr5 163338799 163339009 + 12.0 0.000 Intergenic HERVH-int|LTR|ERV1 -98667 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr20-2161 chr20 42051735 42051945 + 12.0 0.000 Intergenic Intergenic -433463 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr19-2620 chr19 3303490 3303700 + 12.0 0.000 Intergenic MIR|SINE|MIR -56035 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr7-1384 chr7 137670620 137670830 + 12.0 0.000 intron (NM_001321710, intron 3 of 32) intron (NM_001321710, intron 3 of 32) 175607 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr9-2949 chr9 136617182 136617392 + 12.0 0.000 promoter-TSS (NR_135288) promoter-TSS (NR_135288) -106 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr10-4133 chr10 76422865 76423075 + 12.0 0.000 intron (NM_001305581, intron 6 of 6) intron (NM_001305581, intron 6 of 6) -465074 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr4-4408 chr4 44433191 44433401 + 12.0 0.000 intron (NM_198353, intron 1 of 1) LTR80A|LTR|ERVL 15513 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr12-2472 chr12 62250733 62250943 + 12.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -9502 NM_001252079 9958 Hs.434951 NM_006313 ENSG00000135655 USP15 UNPH-2|UNPH4 ubiquitin specific peptidase 15 protein-coding chr10-4184 chr10 98742034 98742244 + 12.0 0.000 intron (NM_001166245, intron 2 of 9) intron (NM_001166245, intron 2 of 9) 182429 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr11-3184 chr11 64254623 64254833 + 12.0 0.000 intron (NM_001316314, intron 2 of 31) intron (NM_001316314, intron 2 of 31) 3198 NM_001184883 5331 Hs.523761 NM_000932 ENSG00000149782 PLCB3 - phospholipase C beta 3 protein-coding chr3-2069 chr3 183767031 183767241 + 12.0 0.000 intron (NM_001351371, intron 15 of 21) intron (NM_001351371, intron 15 of 21) 43315 NR_046727 100874113 NR_046727 YEATS2-AS1 - YEATS2 antisense RNA 1 ncRNA chr3-4269 chr3 150939809 150940019 + 12.0 0.000 intron (NM_052995, intron 2 of 3) intron (NM_052995, intron 2 of 3) 4322 NM_052995 7401 Hs.745448 NM_052995 ENSG00000163646 CLRN1 RP61|USH3|USH3A clarin 1 protein-coding chr1-3182 chr1 109314854 109315064 + 12.0 0.000 intron (NM_001205228, intron 17 of 19) intron (NM_001205228, intron 17 of 19) -7948 NM_001010985 343263 Hs.443402 NM_001010985 ENSG00000221986 MYBPHL - myosin binding protein H like protein-coding chr16-1541 chr16 66934331 66934541 + 12.0 0.000 promoter-TSS (NM_003869) promoter-TSS (NM_003869) -34 NR_046109 51647 Hs.9825 NM_016062 ENSG00000166595 CIAO2B CGI-128|CIA2B|FAM96B|MIP18 cytosolic iron-sulfur assembly component 2B protein-coding chr1-10522 chr1 168877132 168877342 + 12.0 0.000 Intergenic L1PA8|LINE|L1 90296 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr7-2900 chr7 131040612 131040822 + 12.0 0.000 intron (NR_109850, intron 3 of 5) MIR|SINE|MIR 66313 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr9-1094 chr9 112061234 112061444 + 12.0 0.000 intron (NM_022486, intron 13 of 16) intron (NM_022486, intron 13 of 16) 113958 NM_001282643 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr10-4633 chr10 123525021 123525231 + 12.0 0.000 Intergenic AluSz|SINE|Alu -141229 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr22-2139 chr22 38481445 38481655 + 12.0 0.000 TTS (NM_016657) TTS (NM_016657) 13454 NM_006855 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr15-2811 chr15 38367506 38367716 + 12.0 0.000 Intergenic Intergenic -86516 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr6-3078 chr6 77466063 77466273 + 12.0 0.000 Intergenic Intergenic -2146 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr8-2084 chr8 129885460 129885670 + 12.0 0.000 intron (NM_001353307, intron 4 of 13) MER20|DNA|hAT-Charlie 54246 NM_001330612 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr6-2244 chr6 49610492 49610702 + 12.0 0.000 intron (NM_000324, intron 7 of 9) MIR3|SINE|MIR 26277 NM_000324 6005 Hs.120950 NM_000324 ENSG00000112077 RHAG CD241|OHS|OHST|RH2|RH50A|RHNR|Rh50|Rh50GP|SLC42A1 Rh associated glycoprotein protein-coding chr1-12412 chr1 10751407 10751617 + 12.0 0.000 intron (NM_001079843, intron 2 of 20) intron (NM_001079843, intron 2 of 20) 45134 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chrX-911 chrX 140615012 140615222 + 12.0 0.000 Intergenic L1M1|LINE|L1 -94642 NR_028344 286411 Hs.317627 NR_028344 ENSG00000203930 LINC00632 ASINC long intergenic non-protein coding RNA 632 ncRNA chr16-4485 chr16 57076965 57077175 + 12.0 0.000 intron (NM_001330552, intron 39 of 47) L3b|LINE|CR1 -15513 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr5-2311 chr5 57335226 57335436 + 12.0 0.000 Intergenic Kanga1c|DNA|TcMar-Tc2 121257 NM_001127236 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr22-2980 chr22 50350686 50350896 + 12.0 0.000 intron (NM_001242899, intron 1 of 22) AluY|SINE|Alu 7464 NM_001242898 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr2-2782 chr2 3525013 3525223 + 12.0 0.000 Intergenic Intergenic -5587 NM_018269 55256 Hs.502773 NM_018269 ENSG00000182551 ADI1 APL1|ARD|Fe-ARD|HMFT1638|MTCBP1|Ni-ARD|SIPL|mtnD acireductone dioxygenase 1 protein-coding chr17-2468 chr17 48876751 48876961 + 12.0 0.000 intron (NR_135674, intron 3 of 3) intron (NR_135674, intron 3 of 3) -15931 NM_005175 516 Hs.80986 NM_005175 ENSG00000159199 ATP5MC1 ATP5A|ATP5G|ATP5G1 ATP synthase membrane subunit c locus 1 protein-coding chr19-2489 chr19 5230921 5231131 + 12.0 0.000 intron (NM_002850, intron 14 of 37) intron (NM_002850, intron 14 of 37) 109786 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr13-831 chr13 51764389 51764599 + 12.0 0.000 3' UTR (NM_052950, exon 12 of 12) 3' UTR (NM_052950, exon 12 of 12) 39668 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr12-1560 chr12 111900024 111900234 + 12.0 0.000 non-coding (NR_036636, exon 1 of 1) non-coding (NR_036636, exon 1 of 1) 1066 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo chr15-2585 chr15 59713729 59713939 + 12.0 0.000 Intergenic Intergenic -24514 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr7-2520 chr7 45579530 45579740 + 12.0 0.000 intron (NM_001281768, intron 2 of 9) intron (NM_001281768, intron 2 of 9) 5267 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr21-219 chr21 44816976 44817186 + 12.0 0.000 intron (NM_006936, intron 1 of 3) CpG 981 NM_006936 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr18-1875 chr18 26774755 26774965 + 12.0 0.000 Intergenic L1PB2|LINE|L1 -71222 NR_024259 728606 Hs.170599 NR_024259 ENSG00000265369 PCAT18 LINC01092 prostate cancer associated transcript 18 ncRNA chr10-1807 chr10 115092730 115092940 + 12.0 0.000 promoter-TSS (NR_074088) promoter-TSS (NR_074088) -530 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr12-2420 chr12 49215048 49215258 + 11.9 0.000 Intergenic Intergenic -12773 NM_001303114 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr13-715 chr13 64272985 64273195 + 11.9 0.000 Intergenic L1MCa|LINE|L1 -197079 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr5-1291 chr5 644466 644676 + 11.9 0.000 intron (NM_018140, intron 10 of 11) intron (NM_018140, intron 10 of 11) 32231 NM_018140 55722 Hs.591741 NM_018140 ENSG00000112877 CEP72 - centrosomal protein 72 protein-coding chr1-5463 chr1 78240888 78241098 + 11.9 0.000 intron (NR_027310, intron 1 of 5) intron (NR_027310, intron 1 of 5) 11394 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr17-3102 chr17 4195546 4195756 + 11.9 0.000 intron (NR_047571, intron 7 of 23) intron (NR_047571, intron 7 of 23) 51954 NM_001254755 124936 Hs.513871 NM_144611 ENSG00000167740 CYB5D2 - cytochrome b5 domain containing 2 protein-coding chr11-1714 chr11 76700556 76700766 + 11.9 0.000 intron (NR_024042, intron 13 of 20) intron (NR_024042, intron 13 of 20) 21128 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr12-1521 chr12 69357602 69357812 + 11.9 0.000 Intergenic Intergenic -2003 NM_001300950 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding chr17-3295 chr17 49432484 49432694 + 11.9 0.000 Intergenic Intergenic -17684 NM_001281715 5245 Hs.514303 NM_002634 ENSG00000167085 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding chr18-1667 chr18 64199700 64199910 + 11.9 0.000 intron (NR_033881, intron 2 of 9) L2b|LINE|L2 -50779 NR_027245 221241 Hs.567778 NM_152728 ENSG00000179676 LINC00305 C18orf20|HsT1235|NCRNA00305 long intergenic non-protein coding RNA 305 ncRNA chr1-4350 chr1 82386910 82387120 + 11.9 0.000 Intergenic Intergenic -516168 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr12-1765 chr12 87119749 87119959 + 11.9 0.000 Intergenic Intergenic -210885 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr13-1562 chr13 32824689 32824899 + 11.9 0.000 intron (NR_047020, intron 4 of 4) intron (NR_047020, intron 4 of 4) 86858 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr20-500 chr20 24061023 24061233 + 11.9 0.000 Intergenic Intergenic -72349 NM_178311 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr11-3657 chr11 117173175 117173385 + 11.9 0.000 intron (NR_110269, intron 6 of 7) intron (NR_110269, intron 6 of 7) -5463 NM_001040455 51092 Hs.712144 NM_015996 ENSG00000149577 SIDT2 CGI-40 SID1 transmembrane family member 2 protein-coding chr2-1735 chr2 240097979 240098189 + 11.9 0.000 Intergenic AluSx3|SINE|Alu 38221 NM_001163424 150678 Hs.293884 NM_138336 ENSG00000172428 COPS9 CSNAP|MYEOV2 COP9 signalosome subunit 9 protein-coding chr4-1314 chr4 138927242 138927452 + 11.9 0.000 intron (NR_133945, intron 2 of 2) L1MC|LINE|L1 85299 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr10-2252 chr10 102480579 102480789 + 11.9 0.000 3' UTR (NM_005736, exon 11 of 11) 3' UTR (NM_005736, exon 11 of 11) 19289 NM_024789 79847 Hs.309069 NM_024789 ENSG00000138111 MFSD13A C10orf77|TMEM180|bA18I14.8 major facilitator superfamily domain containing 13A protein-coding chr22-1432 chr22 44991285 44991495 + 11.9 0.000 intron (NM_001284296, intron 2 of 13) intron (NM_001284296, intron 2 of 13) 12229 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr12-1531 chr12 80419672 80419882 + 11.9 0.000 Intergenic Intergenic -24458 NM_001145026 374462 Hs.539284 NM_001145026 ENSG00000139304 PTPRQ DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q protein tyrosine phosphatase receptor type Q protein-coding chr9-1429 chr9 131668706 131668916 + 11.9 0.000 intron (NM_001304275, intron 1 of 23) intron (NM_001304275, intron 1 of 23) 41031 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr13-639 chr13 114162103 114162313 + 11.9 0.000 Intergenic Intergenic -29585 NM_007368 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr20-1044 chr20 62361470 62361680 + 11.9 0.000 intron (NM_005560, intron 2 of 79) intron (NM_005560, intron 2 of 79) 5737 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr22-1536 chr22 27832053 27832263 + 11.9 0.000 Intergenic Intergenic -30402 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr9-3482 chr9 13684840 13685050 + 11.9 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -243026 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr6-1490 chr6 82955731 82955941 + 11.9 0.000 intron (NR_146807, intron 10 of 10) MIR3|SINE|MIR 110005 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr13-1091 chr13 90713671 90713881 + 11.9 0.000 Intergenic Intergenic 212821 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr4-5375 chr4 187511545 187511755 + 11.9 0.000 Intergenic Intergenic -6037 NR_038931 339975 Hs.639361 NR_038931 LOC339975 - uncharacterized LOC339975 ncRNA chr17-3165 chr17 69412256 69412466 + 11.9 0.000 Intergenic Intergenic -2336 NM_002758 5608 Hs.49329 NM_002758 ENSG00000108984 MAP2K6 MAPKK6|MEK6|MKK6|PRKMK6|SAPKK-3|SAPKK3 mitogen-activated protein kinase kinase 6 protein-coding chr11-2804 chr11 110951771 110951981 + 11.9 0.000 Intergenic Intergenic 145442 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr2-2904 chr2 224190906 224191116 + 11.9 0.000 Intergenic Intergenic -151692 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr11-3832 chr11 68583301 68583511 + 11.9 0.000 intron (NM_001352358, intron 14 of 22) intron (NM_001352358, intron 14 of 22) -101138 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr6-2702 chr6 40294722 40294932 + 11.9 0.000 Intergenic Intergenic 61179 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr15-2200 chr15 89928721 89928931 + 11.9 0.000 Intergenic Intergenic -15874 NM_182616 348110 Hs.6734 NM_182616 ENSG00000242498 ARPIN C15orf38 actin related protein 2/3 complex inhibitor protein-coding chr20-1904 chr20 62632102 62632312 + 11.9 0.000 Intergenic L1MB3|LINE|L1 -10296 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chrX-2282 chrX 50799650 50799860 + 11.9 0.000 intron (NR_027121, intron 1 of 9) intron (NR_027121, intron 1 of 9) 14289 NM_020717 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding chr1-8657 chr1 205739595 205739805 + 11.9 0.000 intron (NM_022731, intron 1 of 6) AluJb|SINE|Alu 10482 NM_022731 64710 Hs.213061 NM_022731 ENSG00000069275 NUCKS1 JC7|NUCKS nuclear casein kinase and cyclin dependent kinase substrate 1 protein-coding chr1-7522 chr1 161284621 161284831 + 11.9 0.000 3' UTR (NM_001102566, exon 3 of 3) 3' UTR (NM_001102566, exon 3 of 3) 25242 NM_000530 4359 Hs.591486 NM_000530 ENSG00000158887 MPZ CHM|CHN2|CMT1|CMT1B|CMT2I|CMT2J|CMT4E|CMTDI3|CMTDID|DSS|HMSNIB|MPP|P0 myelin protein zero protein-coding chr3-2835 chr3 21390027 21390237 + 11.9 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -15594 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr3-1581 chr3 125220745 125220955 + 11.9 0.000 Intergenic Intergenic -8085 NM_024628 84561 Hs.658514 NM_024628 ENSG00000221955 SLC12A8 CCC9 solute carrier family 12 member 8 protein-coding chr3-1684 chr3 13644761 13644971 + 11.9 0.000 Intergenic MER21-int|LTR|ERVL -5855 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr19-6806 chr19 41821107 41821317 + 11.9 0.000 Intergenic L1M1|LINE|L1 22515 NM_001291419 147719 Hs.98660 NM_173506 ENSG00000273111 LYPD4 SMR LY6/PLAUR domain containing 4 protein-coding chr12-1992 chr12 132392554 132392764 + 11.9 0.000 Intergenic Intergenic 62809 NR_120467 101928416 NR_120467 ENSG00000255916 LOC101928416 - uncharacterized LOC101928416 ncRNA chr17-2930 chr17 50118712 50118922 + 11.9 0.000 intron (NM_174920, intron 2 of 10) MIR|SINE|MIR 11343 NM_174920 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr1-5825 chr1 225329043 225329253 + 11.9 0.000 intron (NM_001367479, intron 64 of 85) intron (NM_001367479, intron 64 of 85) 98890 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr8-3956 chr8 47920126 47920336 + 11.9 0.000 intron (NM_001081640, intron 21 of 84) MER9a3|LTR|ERVK 39905 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr10-1879 chr10 101558077 101558287 + 11.9 0.000 TTS (NM_033637) TTS (NM_033637) 30075 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr4-1817 chr4 76782972 76783182 + 11.9 0.000 3' UTR (NM_020859, exon 11 of 11) 3' UTR (NM_020859, exon 11 of 11) 115067 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr18-918 chr18 63161368 63161578 + 11.9 0.000 intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 157907 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr11-1895 chr11 36838960 36839170 + 11.9 0.000 Intergenic Intergenic -240786 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr2-8655 chr2 147647381 147647591 + 11.9 0.000 Intergenic Intergenic -197031 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr7-4327 chr7 40804929 40805139 + 11.9 0.000 intron (NM_024728, intron 14 of 14) intron (NM_024728, intron 14 of 14) 174905 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr11-1767 chr11 23947965 23948175 + 11.9 0.000 Intergenic Intergenic -528880 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr12-3723 chr12 13220828 13221038 + 11.9 0.000 TTS (NM_001423) TTS (NM_001423) 24207 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr16-1607 chr16 69482086 69482296 + 11.9 0.000 Intergenic Intergenic 57596 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr12-1729 chr12 42961451 42961661 + 11.9 0.000 Intergenic Intergenic -193759 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr9-1522 chr9 112867116 112867326 + 11.9 0.000 intron (NM_001012994, intron 8 of 8) intron (NM_001012994, intron 8 of 8) 23655 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr10-2495 chr10 34049772 34049982 + 11.9 0.000 Intergenic Intergenic -277197 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr7-7193 chr7 12776324 12776534 + 11.9 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 88796 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr3-4291 chr3 157082763 157082973 + 11.9 0.000 non-coding (NR_034007, exon 4 of 4) non-coding (NR_034007, exon 4 of 4) 1027 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA chr17-2261 chr17 17503840 17504050 + 11.9 0.000 Intergenic Intergenic -7550 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr12-3645 chr12 104297830 104298040 + 11.9 0.000 intron (NM_001261446, intron 2 of 13) intron (NM_001261446, intron 2 of 13) -5804 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr3-9506 chr3 51231316 51231526 + 11.9 0.000 intron (NM_004947, intron 19 of 52) AluSz|SINE|Alu -153870 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr10-5765 chr10 103649058 103649268 + 11.9 0.000 intron (NM_001365079, intron 2 of 8) intron (NM_001365079, intron 2 of 8) 29052 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-4421 chr2 129190201 129190411 + 11.9 0.000 Intergenic Intergenic 83585 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr5-2857 chr5 75509944 75510154 + 11.9 0.000 intron (NM_031361, intron 1 of 16) intron (NM_031361, intron 1 of 16) 1580 NM_031361 10087 Hs.270437 NM_005713 ENSG00000113163 CERT1 CERT|CERTL|COL4A3BP|GPBP|MRD34|STARD11 ceramide transporter 1 protein-coding chr5-1402 chr5 141326026 141326236 + 11.9 0.000 Intergenic Intergenic -4554 NM_031993 56114 Hs.368160 NM_018912 ENSG00000204956 PCDHGA1 PCDH-GAMMA-A1 protocadherin gamma subfamily A, 1 protein-coding chr1-7041 chr1 177665183 177665393 + 11.9 0.000 Intergenic Intergenic -35236 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chrX-2962 chrX 9951293 9951503 + 11.9 0.000 Intergenic L1ME2z|LINE|L1 -15960 NM_001195081 100288814 NM_001195081 ENSG00000234469 CLDN34 - claudin 34 protein-coding chr20-795 chr20 63272156 63272366 + 11.9 0.000 promoter-TSS (NM_018209) promoter-TSS (NM_018209) -524 NM_001281483 55738 Hs.25584 NM_018209 ENSG00000101199 ARFGAP1 ARF1GAP|HRIHFB2281 ADP ribosylation factor GTPase activating protein 1 protein-coding chr17-2289 chr17 39003128 39003338 + 11.9 0.000 Intergenic L2|LINE|L2 23877 NR_135645 105371766 Hs.311469 NR_135645 ENSG00000266013 LINC02079 - long intergenic non-protein coding RNA 2079 ncRNA chr1-3237 chr1 186819264 186819474 + 11.9 0.000 Intergenic Intergenic -9531 NM_024420 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr2-1887 chr2 86199463 86199673 + 11.9 0.000 intron (NM_016622, intron 1 of 3) intron (NM_016622, intron 1 of 3) 111 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr6-2557 chr6 37988521 37988731 + 11.9 0.000 intron (NM_021943, intron 2 of 5) intron (NM_021943, intron 2 of 5) 168899 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr1-7097 chr1 196404220 196404430 + 11.9 0.000 intron (NM_001287820, intron 12 of 26) L2c|LINE|L2 178156 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chr16-3890 chr16 75391222 75391432 + 11.9 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) 42176 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr7-1663 chr7 101518579 101518789 + 11.9 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 50322 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr2-3505 chr2 219852144 219852354 + 11.9 0.000 Intergenic Intergenic 52640 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr8-3022 chr8 124166113 124166323 + 11.9 0.000 intron (NR_103547, intron 1 of 4) intron (NR_103547, intron 1 of 4) 5304 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr9-3866 chr9 132832514 132832724 + 11.9 0.000 intron (NM_001317959, intron 6 of 14) intron (NM_001317959, intron 6 of 14) -45725 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr2-3036 chr2 70900507 70900717 + 11.9 0.000 promoter-TSS (NM_012476) promoter-TSS (NM_012476) 36 NM_012476 25806 Hs.249170 NM_012476 ENSG00000116035 VAX2 DRES93 ventral anterior homeobox 2 protein-coding chr2-4375 chr2 28356202 28356412 + 11.9 0.000 Intergenic Intergenic -36551 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr9-4884 chr9 5320882 5321092 + 11.9 0.000 Intergenic Intergenic -16271 NM_134441 6019 Hs.127032 NM_005059 ENSG00000107014 RLN2 H2|H2-RLX|RLXH2|bA12D24.1.1|bA12D24.1.2 relaxin 2 protein-coding chr3-1580 chr3 120113545 120113755 + 11.9 0.000 Intergenic L2c|LINE|L2 -19203 NM_001354596 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr17-6322 chr17 61524573 61524783 + 11.9 0.000 Intergenic MER66B|LTR|ERV1 66541 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr5-1574 chr5 150211171 150211381 + 11.9 0.000 TTS (NM_014228) TTS (NM_014228) 21214 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr18-1346 chr18 79965220 79965430 + 11.9 0.000 intron (NM_001136180, intron 1 of 3) intron (NM_001136180, intron 1 of 3) 682 NM_001136180 440498 Hs.191582 NM_001136180 ENSG00000226742 HSBP1L1 - heat shock factor binding protein 1 like 1 protein-coding chr14-1532 chr14 60101946 60102156 + 11.9 0.000 intron (NM_022495, intron 1 of 9) L1MB1|LINE|L1 10128 NM_001330177 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chr12-4469 chr12 15897523 15897733 + 11.9 0.000 intron (NM_007178, intron 6 of 9) intron (NM_007178, intron 6 of 9) -13704 NM_015954 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr12-4993 chr12 78998298 78998508 + 11.9 0.000 intron (NM_001291901, intron 2 of 9) intron (NM_001291901, intron 2 of 9) -47289 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr7-2424 chr7 97027614 97027824 + 11.9 0.000 Intergenic Intergenic -2888 NM_005221 1749 Hs.99348 NM_005221 ENSG00000105880 DLX5 SHFM1D distal-less homeobox 5 protein-coding chr7-5705 chr7 70082325 70082535 + 11.9 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 483955 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr8-3944 chr8 46605435 46605645 + 11.9 0.000 intron (NR_146077, intron 3 of 8) intron (NR_146077, intron 3 of 8) 12103 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr6-3237 chr6 144078301 144078511 + 11.9 0.000 Intergenic Kanga1b|DNA|TcMar-Tc2 -13807 NM_001080955 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr7-1712 chr7 1691672 1691882 + 11.9 0.000 intron (NM_001128636, intron 1 of 2) intron (NM_001128636, intron 1 of 2) 3658 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr11-3484 chr11 93221922 93222132 + 11.9 0.000 Intergenic Intergenic -24036 NM_152313 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr8-525 chr8 144056147 144056357 + 11.9 0.000 exon (NM_017570, exon 15 of 27) exon (NM_017570, exon 15 of 27) 1128 NR_106905 102465509 NR_106905 ENSG00000277888 MIR6846 hsa-mir-6846 microRNA 6846 ncRNA chr7-4302 chr7 27709909 27710119 + 11.9 0.000 Intergenic Intergenic -29359 NM_001206901 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr1-4749 chr1 8062094 8062304 + 11.9 0.000 Intergenic Intergenic -35890 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr2-4410 chr2 96884138 96884348 + 11.9 0.000 intron (NM_001122646, intron 14 of 16) intron (NM_001122646, intron 14 of 16) 10919 NM_001172667 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr9-4911 chr9 8816306 8816516 + 11.9 0.000 intron (NM_002839, intron 11 of 45) intron (NM_002839, intron 11 of 45) -41607 NR_121599 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr20-1919 chr20 4994998 4995208 + 11.9 0.000 intron (NM_203327, intron 1 of 16) intron (NM_203327, intron 1 of 16) 6407 NM_005116 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr7-1529 chr7 91019731 91019941 + 11.9 0.000 intron (NM_012395, intron 9 of 13) intron (NM_012395, intron 9 of 13) -244597 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr11-2283 chr11 9053212 9053422 + 11.9 0.000 intron (NM_001367977, intron 11 of 22) intron (NM_001367977, intron 11 of 22) 37062 NR_049874 100847015 NR_049874 ENSG00000264984 MIR5691 - microRNA 5691 ncRNA chr16-1955 chr16 56617348 56617558 + 11.9 0.000 promoter-TSS (NR_001447) promoter-TSS (NR_001447) -8 NR_001447 4500 Hs.647358 NR_001447 ENSG00000260549 MT1L MT1|MT1R|MTF metallothionein 1L, pseudogene pseudo chr11-5071 chr11 112017006 112017216 + 11.9 0.000 intron (NM_001037954, intron 18 of 19) intron (NM_001037954, intron 18 of 19) -7703 NM_001931 1737 Hs.335551 NM_001931 ENSG00000150768 DLAT DLTA|E2|PDC-E2|PDCE2 dihydrolipoamide S-acetyltransferase protein-coding chr1-2997 chr1 206693131 206693341 + 11.9 0.000 intron (NM_004759, intron 1 of 9) intron (NM_004759, intron 1 of 9) 8331 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr9-1782 chr9 136621200 136621410 + 11.9 0.000 Intergenic Intergenic -4124 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr15-4202 chr15 25493332 25493542 + 11.9 0.000 Intergenic L1MB7|LINE|L1 -54381 NM_000462 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr8-2514 chr8 22052045 22052255 + 11.9 0.000 intron (NM_001323382, intron 1 of 15) intron (NM_001323382, intron 1 of 15) -1405 NM_001114137 2039 Hs.106124 NM_001978 ENSG00000158856 DMTN DMT|EPB49 dematin actin binding protein protein-coding chr7-2715 chr7 31410301 31410511 + 11.9 0.000 Intergenic MLT1B-int|LTR|ERVL-MaLR -69680 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr6-5202 chr6 131945874 131946084 + 11.9 0.000 Intergenic L1MA8|LINE|L1 5393 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr10-3409 chr10 31426335 31426545 + 11.9 0.000 intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) -26685 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr7-2400 chr7 51041107 51041317 + 11.9 0.000 intron (NM_015198, intron 8 of 12) intron (NM_015198, intron 8 of 12) -247759 NM_001371008 chr7-2071 chr7 151247033 151247243 + 11.9 0.000 intron (NM_003078, intron 2 of 13) intron (NM_003078, intron 2 of 13) 1556 NM_001003801 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chrX-424 chrX 41301012 41301222 + 11.9 0.000 Intergenic MLT2B4|LTR|ERVL 25378 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr1-4517 chr1 35288757 35288967 + 11.9 0.000 intron (NM_005095, intron 1 of 29) intron (NM_005095, intron 1 of 29) 20153 NM_001350140 9202 Hs.269211 NM_005095 ENSG00000146463 ZMYM4 CDIR|MYM|ZNF198L3|ZNF262 zinc finger MYM-type containing 4 protein-coding chr3-1208 chr3 45594075 45594285 + 11.9 0.000 promoter-TSS (NM_014240) promoter-TSS (NM_014240) -571 NM_014240 8994 Hs.193370 NM_014240 ENSG00000144791 LIMD1 - LIM domains containing 1 protein-coding chr10-3550 chr10 77533795 77534005 + 11.9 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 103908 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr13-1333 chr13 31765450 31765660 + 11.9 0.000 intron (NM_130806, intron 4 of 17) intron (NM_130806, intron 4 of 17) 26013 NM_001166058 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr4-3097 chr4 153318785 153318995 + 11.9 0.000 intron (NM_001351057, intron 9 of 12) intron (NM_001351057, intron 9 of 12) -10079 NR_001562 303 Hs.546235 NR_001562 ANXA2P1 ANX2L1|ANX2P1|LPC2A annexin A2 pseudogene 1 pseudo chr2-1856 chr2 237410286 237410496 + 11.9 0.000 intron (NM_057165, intron 1 of 7) AluJb|SINE|Alu 3773 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr11-2902 chr11 62892671 62892881 + 11.9 0.000 Intergenic L2b|LINE|L2 11077 NR_037193 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr1-8523 chr1 156401750 156401960 + 11.9 0.000 Intergenic Intergenic 18574 NR_029691 407046 NR_029691 ENSG00000207933 MIR9-1 MIRN9-1|hsa-mir-9-1|miRNA9-1|mir-9-1 microRNA 9-1 ncRNA chr9-1198 chr9 113957665 113957875 + 11.9 0.000 intron (NM_001318042, intron 1 of 14) intron (NM_001318042, intron 1 of 14) 81461 NM_001318042 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr7-2499 chr7 27454039 27454249 + 11.9 0.000 Intergenic LTR67B|LTR|ERVL -161830 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr6-3255 chr6 149489789 149489999 + 11.9 0.000 Intergenic MIR|SINE|MIR -4880 NM_207360 340152 Hs.632618 NM_207360 ENSG00000178199 ZC3H12D C6orf95|MCPIP4|TFL|dJ281H8.1|p34 zinc finger CCCH-type containing 12D protein-coding chr12-2022 chr12 47278192 47278402 + 11.9 0.000 Intergenic Intergenic 29102 NR_135024 105369747 Hs.88617 NR_135024 LOC105369747 - uncharacterized LOC105369747 ncRNA chr21-943 chr21 42414921 42415131 + 11.9 0.000 intron (NM_018961, intron 5 of 14) intron (NM_018961, intron 5 of 14) 11124 NM_001001895 53347 Hs.473912 NM_018961 ENSG00000160185 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding chr2-2885 chr2 212548549 212548759 + 11.9 0.000 Intergenic Intergenic -9852 NM_005235 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr5-7469 chr5 33091747 33091957 + 11.9 0.000 Intergenic L1PA16|LINE|L1 -137883 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr20-595 chr20 38461164 38461374 + 11.9 0.000 Intergenic SVA_D|Retroposon|SVA -11574 NM_001282917 57148 Hs.598850 NM_020336 ENSG00000170471 RALGAPB KIAA1219|RalGAPbeta Ral GTPase activating protein non-catalytic beta subunit protein-coding chr2-5383 chr2 101464481 101464691 + 11.9 0.000 intron (NM_001367509, intron 2 of 13) intron (NM_001367509, intron 2 of 13) 10526 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr14-1304 chr14 35607724 35607934 + 11.9 0.000 intron (NM_014990, intron 34 of 40) L1MB8|LINE|L1 73665 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding chr11-3920 chr11 122101903 122102113 + 11.9 0.000 non-coding (NR_137191, exon 1 of 3) non-coding (NR_137191, exon 1 of 3) 221 NR_137191 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr15-1207 chr15 45642277 45642487 + 11.9 0.000 intron (NM_021199, intron 1 of 9) MER102b|DNA|hAT-Charlie 7353 NM_021199 58472 Hs.511251 NM_021199 ENSG00000137767 SQOR CGI-44|PRO1975|SQR|SQRDL sulfide quinone oxidoreductase protein-coding chr7-3862 chr7 102875918 102876128 + 11.9 0.000 intron (NR_105043, intron 17 of 20) intron (NR_105043, intron 17 of 20) -36977 NM_001031692 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr9-6321 chr9 137519319 137519529 + 11.9 0.000 intron (NM_001098537, intron 11 of 34) intron (NM_001098537, intron 11 of 34) 30978 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr8-2776 chr8 118338115 118338325 + 11.9 0.000 intron (NM_001101676, intron 4 of 4) intron (NM_001101676, intron 4 of 4) -226401 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr1-3388 chr1 203627995 203628205 + 11.9 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 163 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr9-4081 chr9 126232252 126232462 + 11.9 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 43558 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr11-3621 chr11 72295207 72295417 + 11.9 0.000 intron (NM_030813, intron 13 of 16) intron (NM_030813, intron 13 of 16) -51136 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr9-4753 chr9 131954215 131954425 + 11.9 0.000 intron (NM_001253881, intron 3 of 6) intron (NM_001253881, intron 3 of 6) 125547 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr10-3623 chr10 95276084 95276294 + 11.9 0.000 intron (NM_020992, intron 1 of 6) MIRc|SINE|MIR 14814 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr17-2725 chr17 73306190 73306400 + 11.9 0.000 intron (NM_012121, intron 1 of 1) AluJo|SINE|Alu 5706 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr2-2405 chr2 26401785 26401995 + 11.9 0.000 promoter-TSS (NM_145038) promoter-TSS (NM_145038) -30 NM_145038 92749 Hs.393714 NM_145038 ENSG00000157856 DRC1 C2orf39|CCDC164|CILD21 dynein regulatory complex subunit 1 protein-coding chr4-2824 chr4 41281151 41281361 + 11.9 0.000 Intergenic Intergenic 24328 NM_004181 7345 Hs.518731 NM_004181 ENSG00000154277 UCHL1 HEL-117|HEL-S-53|NDGOA|PARK5|PGP 9.5|PGP9.5|PGP95|SPG79|Uch-L1 ubiquitin C-terminal hydrolase L1 protein-coding chr16-2045 chr16 58025756 58025966 + 11.9 0.000 5' UTR (NM_002428, exon 1 of 10) 5' UTR (NM_002428, exon 1 of 10) 107 NM_002428 4324 Hs.80343 NM_002428 ENSG00000102996 MMP15 MMP-15|MT2-MMP|MT2MMP|MTMMP2|SMCP-2 matrix metallopeptidase 15 protein-coding chr10-7329 chr10 527629 527839 + 11.9 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -100830 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr6-932 chr6 52670880 52671090 + 11.9 0.000 promoter-TSS (NM_014051) promoter-TSS (NM_014051) -128 NM_014051 28978 Hs.94896 NM_014051 ENSG00000096092 TMEM14A C6orf73|PTD011 transmembrane protein 14A protein-coding chr9-1803 chr9 42397379 42397589 + 11.9 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 171865 NR_126050 103908605 Hs.721139 NR_126050 LOC103908605 - uncharacterized LOC103908605 ncRNA chr11-3362 chr11 123219266 123219476 + 11.9 0.000 Intergenic Intergenic -24123 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr12-1484 chr12 18697057 18697267 + 11.9 0.000 intron (NM_033123, intron 10 of 14) intron (NM_033123, intron 10 of 14) 40347 NM_001330769 89869 Hs.97542 NM_033123 ENSG00000139151 PLCZ1 NYD-SP27|PLC-zeta-1|PLCzeta|SPGF17 phospholipase C zeta 1 protein-coding chr13-541 chr13 95271346 95271556 + 11.9 0.000 intron (NM_001105515, intron 1 of 20) intron (NM_001105515, intron 1 of 20) 29995 NM_005845 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr15-1600 chr15 78363613 78363823 + 11.9 0.000 Intergenic Intergenic 23365 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr6-3208 chr6 134117566 134117776 + 11.9 0.000 promoter-TSS (NR_037938) promoter-TSS (NR_037938) 9 NR_037938 387065 Hs.571061 NR_037938 HMGA1P7 HMGA1L7 high mobility group AT-hook 1 pseudogene 7 pseudo chr8-3640 chr8 3992906 3993116 + 11.9 0.000 intron (NM_033225, intron 5 of 69) L1MC4a|LINE|L1 1001903 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr20-849 chr20 41008383 41008593 + 11.9 0.000 intron (NR_145525, intron 2 of 2) L2b|LINE|L2 -20334 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr19-993 chr19 39125611 39125821 + 11.9 0.000 promoter-TSS (NM_001014831) promoter-TSS (NM_001014831) -70 NM_001014835 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr1-1863 chr1 67832139 67832349 + 11.9 0.000 promoter-TSS (NR_040077) promoter-TSS (NR_040077) -44 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12, DIRAS3 and WLS antisense RNA 1 ncRNA chr18-2893 chr18 10893347 10893557 + 11.9 0.000 intron (NM_022068, intron 4 of 51) intron (NM_022068, intron 4 of 51) -133803 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr22-1116 chr22 38479723 38479933 + 11.9 0.000 intron (NM_016657, intron 3 of 3) intron (NM_016657, intron 3 of 3) 11732 NM_006855 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr13-1050 chr13 110541446 110541656 + 11.9 0.000 intron (NM_017817, intron 1 of 1) intron (NM_017817, intron 1 of 1) 20171 NM_017817 55647 Hs.743563 NM_017817 ENSG00000139832 RAB20 - RAB20, member RAS oncogene family protein-coding chr21-583 chr21 33212669 33212879 + 11.9 0.000 Intergenic MLT2D|LTR|ERVL -17121 NM_207585 3455 Hs.708195 NM_000874 ENSG00000159110 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB|IMD45 interferon alpha and beta receptor subunit 2 protein-coding chr21-302 chr21 32597338 32597548 + 11.9 0.000 intron (NM_001350338, intron 5 of 7) L1MB3|LINE|L1 -11920 NM_144659 140290 Hs.728804 NM_018277 ENSG00000242220 TCP10L C21orf77|PRED77|TCP10A-1|TCP10A-2 t-complex 10 like protein-coding chr4-2580 chr4 103498448 103498658 + 11.9 0.000 Intergenic Intergenic 73511 NR_125925 101929448 Hs.570839 NR_125925 ENSG00000248740 LINC02428 - long intergenic non-protein coding RNA 2428 ncRNA chr14-999 chr14 102929993 102930203 + 11.9 0.000 intron (NM_030943, intron 9 of 11) CpG-7685 7442 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr13-1569 chr13 34475980 34476190 + 11.9 0.000 intron (NR_047036, intron 2 of 2) L2c|LINE|L2 128042 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr4-2727 chr4 6051487 6051697 + 11.9 0.000 intron (NM_001099433, intron 13 of 20) intron (NM_001099433, intron 13 of 20) -33046 NM_001364690 389197 Hs.479065 NM_207405 ENSG00000181215 C4orf50 - chromosome 4 open reading frame 50 protein-coding chr1-2632 chr1 146052537 146052747 + 11.9 0.000 promoter-TSS (NR_104085) promoter-TSS (NR_104085) 46 NR_125968 101928979 Hs.735893 NR_125967 ENSG00000233396 LINC01719 - long intergenic non-protein coding RNA 1719 ncRNA chr11-3427 chr11 46226123 46226333 + 11.9 0.000 Intergenic L1MB7|LINE|L1 -51434 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr12-1584 chr12 124701310 124701520 + 11.9 0.000 Intergenic Intergenic -133803 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr17-1950 chr17 81898164 81898374 + 11.9 0.000 intron (NM_001289418, intron 2 of 2) intron (NM_001289418, intron 2 of 2) -3969 NM_148896 256933 Hs.569843 NM_148896 ENSG00000183979 NPB L7|PPL7|PPNPB neuropeptide B protein-coding chr1-5236 chr1 201422348 201422558 + 11.9 0.000 promoter-TSS (NM_003281) promoter-TSS (NM_003281) -723 NM_003281 7135 Hs.320890 NM_003281 ENSG00000159173 TNNI1 SSTNI|TNN1 troponin I1, slow skeletal type protein-coding chr1-2927 chr1 33633272 33633482 + 11.9 0.000 intron (NM_052896, intron 32 of 69) CpG 160732 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr12-2505 chr12 84661937 84662147 + 11.9 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 250757 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr20-851 chr20 50594527 50594737 + 11.9 0.000 non-coding (NR_110890, exon 17 of 22) non-coding (NR_110890, exon 17 of 22) 8846 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr18-371 chr18 499546 499756 + 11.9 0.000 intron (NM_130386, intron 1 of 9) CpG 1050 NM_130386 81035 Hs.464422 NM_030781 ENSG00000158270 COLEC12 CLP1|NSR2|SCARA4|SRCL collectin subfamily member 12 protein-coding chr2-9819 chr2 146755618 146755828 + 11.9 0.000 Intergenic Intergenic 168666 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr4-1567 chr4 2469797 2470007 + 11.9 0.000 5' UTR (NM_001185009, exon 1 of 9) 5' UTR (NM_001185009, exon 1 of 9) 449 NM_001185009 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr20-1274 chr20 45791829 45792039 + 11.9 0.000 promoter-TSS (NM_080614) promoter-TSS (NM_080614) -20 NM_052951 116092 Hs.472852 NM_052951 ENSG00000101457 DNTTIP1 C20orf167|Tdif1|dJ447F3.4 deoxynucleotidyltransferase terminal interacting protein 1 protein-coding chr9-1569 chr9 34501976 34502186 + 11.9 0.000 intron (NM_001281428, intron 12 of 19) intron (NM_001281428, intron 12 of 19) 20909 NM_198573 375704 Hs.522085 NM_198573 ENSG00000168913 ENHO C9orf165|UNQ470 energy homeostasis associated protein-coding chr5-2976 chr5 178210266 178210476 + 11.9 0.000 intron (NM_031266, intron 7 of 7) MIRb|SINE|MIR 5838 NM_031266 3182 Hs.591731 NM_004499 ENSG00000197451 HNRNPAB ABBP1|HNRPAB heterogeneous nuclear ribonucleoprotein A/B protein-coding chr9-5298 chr9 85331561 85331771 + 11.9 0.000 Intergenic MIRb|SINE|MIR 410363 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr5-2476 chr5 141940523 141940733 + 11.9 0.000 3' UTR (NM_001142603, exon 13 of 13) 3' UTR (NM_001142603, exon 13 of 13) 16757 NM_014773 9812 Hs.210532 NM_014773 ENSG00000081791 DELE1 DELE|KIAA0141 DAP3 binding cell death enhancer 1 protein-coding chr1-2717 chr1 244719917 244720127 + 11.9 0.000 Intergenic L1ME3D|LINE|L1 66896 NM_001297746 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr6-1516 chr6 11710385 11710595 + 11.9 0.000 Intergenic LTR64|LTR|ERV1 68557 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr7-3312 chr7 51175800 51176010 + 11.9 0.000 intron (NM_015198, intron 5 of 12) MER34B|LTR|ERV1 140904 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr2-3624 chr2 112963304 112963514 + 11.9 0.000 Intergenic MER5A1|DNA|hAT-Charlie -14597 NM_019618 56300 Hs.211238 NM_019618 ENSG00000136688 IL36G IL-1F9|IL-1H1|IL-1RP2|IL1E|IL1F9|IL1H1|IL1RP2 interleukin 36 gamma protein-coding chr10-5506 chr10 82459453 82459663 + 11.9 0.000 intron (NR_163253, intron 3 of 10) intron (NR_163253, intron 3 of 10) -226638 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr17-3717 chr17 18172764 18172974 + 11.9 0.000 intron (NM_016239, intron 63 of 64) MLT1B|LTR|ERVL-MaLR -10959 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chrX-322 chrX 154371479 154371689 + 11.9 0.000 intron (NM_001110556, intron 1 of 47) CpG-30192 3050 NM_001110556 2316 Hs.195464 NM_001456 ENSG00000196924 FLNA ABP-280|ABPX|CSBS|CVD1|FGS2|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD filamin A protein-coding chr13-3628 chr13 30720534 30720744 + 11.9 0.000 intron (NM_001204406, intron 1 of 5) intron (NM_001204406, intron 1 of 5) 7161 NM_001204406 241 Hs.507658 NM_001629 ENSG00000132965 ALOX5AP FLAP arachidonate 5-lipoxygenase activating protein protein-coding chr1-9592 chr1 44437795 44438005 + 11.9 0.000 intron (NM_001319957, intron 1 of 13) MIRb|SINE|MIR 13899 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr8-2411 chr8 80872570 80872780 + 11.9 0.000 intron (NM_001033723, intron 1 of 8) intron (NM_001033723, intron 1 of 8) 1793 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr3-4641 chr3 27356734 27356944 + 11.9 0.000 intron (NM_152534, intron 2 of 38) L2a|LINE|L2 12544 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr1-5752 chr1 114552353 114552563 + 11.9 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 29157 NM_005872 10286 Hs.22960 NM_005872 ENSG00000116752 BCAS2 DAM1|SPF27|Snt309 BCAS2 pre-mRNA processing factor protein-coding chr2-2077 chr2 216774578 216774788 + 11.9 0.000 Intergenic Intergenic -79134 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr7-3789 chr7 87944345 87944555 + 11.9 0.000 intron (NM_001324421, intron 2 of 28) intron (NM_001324421, intron 2 of 28) 10199 NM_001324421 53616 Hs.256398 NM_004194 ENSG00000008277 ADAM22 ADAM 22|EIEE61|MDC2 ADAM metallopeptidase domain 22 protein-coding chr2-4773 chr2 27655502 27655712 + 11.9 0.000 intron (NM_014860, intron 4 of 5) intron (NM_014860, intron 4 of 5) -7864 NM_018158 22950 Hs.306000 NM_018158 ENSG00000163798 SLC4A1AP HLC3 solute carrier family 4 member 1 adaptor protein protein-coding chr5-1347 chr5 1799860 1800070 + 11.9 0.000 promoter-TSS (NM_032479) promoter-TSS (NM_032479) -128 NM_032479 64979 Hs.719465 NM_032479 ENSG00000171421 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding chr3-3043 chr3 124510330 124510540 + 11.9 0.000 intron (NM_001024660, intron 33 of 59) intron (NM_001024660, intron 33 of 59) -74223 NM_001322995 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr3-10132 chr3 113746764 113746974 + 11.9 0.000 promoter-TSS (NM_001308445) promoter-TSS (NM_001308445) -166 NM_001690 523 Hs.477155 NM_001690 ENSG00000114573 ATP6V1A ARCL2D|ATP6A1|ATP6V1A1|HO68|IECEE3|VA68|VPP2|Vma1 ATPase H+ transporting V1 subunit A protein-coding chr4-3364 chr4 7750031 7750241 + 11.9 0.000 Intergenic Intergenic -3954 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr19-1675 chr19 2316162 2316372 + 11.9 0.000 Intergenic Intergenic -8113 NM_001101391 645191 NM_001101391 ENSG00000220008 LINGO3 LERN2|LRRN6B leucine rich repeat and Ig domain containing 3 protein-coding chr10-3225 chr10 103207690 103207900 + 11.9 0.000 Intergenic HERVH-int|LTR|ERV1 -14489 NM_001351187 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr2-2326 chr2 146246884 146247094 + 11.9 0.000 Intergenic Intergenic -340068 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr3-4020 chr3 65295994 65296204 + 11.9 0.000 Intergenic Intergenic -597717 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr7-1029 chr7 44309699 44309909 + 11.9 0.000 intron (NM_172081, intron 1 of 18) CpG 15790 NM_172084 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr9-2042 chr9 3751184 3751394 + 11.9 0.000 Intergenic Intergenic 83203 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chr1-2975 chr1 156657433 156657643 + 11.9 0.000 intron (NM_021948, intron 10 of 13) intron (NM_021948, intron 10 of 13) 15421 NM_198427 63827 Hs.516904 NM_021948 ENSG00000132692 BCAN BEHAB|CSPG7 brevican protein-coding chr16-722 chr16 54286800 54287010 + 11.9 0.000 promoter-TSS (NM_024336) promoter-TSS (NM_024336) -118 NM_024336 79191 Hs.499205 NM_024336 ENSG00000177508 IRX3 IRX-1|IRXB1 iroquois homeobox 3 protein-coding chr2-1438 chr2 231563477 231563687 + 11.9 0.000 Intergenic Intergenic -29282 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr1-8963 chr1 9431466 9431676 + 11.9 0.000 Intergenic L2b|LINE|L2 -2575 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr2-2235 chr2 202912189 202912399 + 11.9 0.000 promoter-TSS (NM_001104586) promoter-TSS (NM_001104586) 19 NM_024744 79800 Hs.444982 NM_024744 ENSG00000138380 CARF ALS2CR8|NYD-SP24 calcium responsive transcription factor protein-coding chr20-1437 chr20 44656820 44657030 + 11.9 0.000 non-coding (NR_034104, exon 5 of 5) non-coding (NR_034104, exon 5 of 5) -5167 NM_001322051 100 Hs.654536 NM_000022 ENSG00000196839 ADA - adenosine deaminase protein-coding chr16-1635 chr16 2191275 2191485 + 11.9 0.000 intron (NM_020764, intron 1 of 19) intron (NM_020764, intron 1 of 19) 5225 NM_020764 57524 Hs.643537 NM_020764 ENSG00000167971 CASKIN1 ANKS5A CASK interacting protein 1 protein-coding chr18-920 chr18 63440202 63440412 + 11.9 0.000 Intergenic Intergenic -17831 NM_004869 9525 Hs.126550 NM_004869 ENSG00000119541 VPS4B MIG1|SKD1|SKD1B|VPS4-2 vacuolar protein sorting 4 homolog B protein-coding chr5-2450 chr5 134076538 134076748 + 11.9 0.000 Intergenic Intergenic -38038 NM_003202 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr2-4021 chr2 101759248 101759458 + 11.9 0.000 intron (NM_145686, intron 2 of 30) intron (NM_145686, intron 2 of 30) 61646 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr13-1370 chr13 96819884 96820094 + 11.9 0.000 intron (NM_153456, intron 1 of 1) AluSx1|SINE|Alu 164183 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr7-3832 chr7 99583373 99583583 + 11.9 0.000 Intergenic SATR1|Satellite|Satellite -14789 NM_001195542 100289187 Hs.729333 NM_001195541 ENSG00000244219 TMEM225B GS1-259H13.2 transmembrane protein 225B protein-coding chr19-3107 chr19 10826948 10827158 + 11.9 0.000 intron (NM_001005362, intron 17 of 19) AluJo|SINE|Alu -1920 NR_106851 102466737 NR_106851 ENSG00000275640 MIR6793 hsa-mir-6793 microRNA 6793 ncRNA chrX-549 chrX 11064829 11065039 + 11.9 0.000 Intergenic Intergenic -46398 NM_001122608 3052 Hs.211571 NM_005333 ENSG00000004961 HCCS CCHL|LSDMCA1|MCOPS7|MLS holocytochrome c synthase protein-coding chr11-5660 chr11 127047890 127048100 + 11.9 0.000 Intergenic Intergenic -19007 NR_120578 101929473 Hs.737523 NR_120578 ENSG00000255087 LOC101929473 - uncharacterized LOC101929473 ncRNA chr19-2348 chr19 47697940 47698150 + 11.9 0.000 intron (NM_015711, intron 11 of 14) L2b|LINE|L2 -15377 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr15-2156 chr15 77168622 77168832 + 11.9 0.000 intron (NM_024776, intron 5 of 7) intron (NM_024776, intron 5 of 7) 56677 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr16-1516 chr16 30400108 30400318 + 11.9 0.000 TTS (NM_001324494) TTS (NM_001324494) 4793 NM_152652 197407 Hs.513501 NM_152652 ENSG00000180035 ZNF48 ZNF553 zinc finger protein 48 protein-coding chr1-3530 chr1 203078296 203078506 + 11.9 0.000 3' UTR (NM_001304332, exon 29 of 29) 3' UTR (NM_001304332, exon 29 of 29) -5394 NR_160550 114004358 NR_160550 MYOPARR - myogenin promoter associated myogenic regulatory antisense long non coding RNA ncRNA chr2-3635 chr2 133201074 133201284 + 11.9 0.000 intron (NM_207481, intron 5 of 17) MER44B|DNA|TcMar-Tigger -65016 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr8-1543 chr8 101450195 101450405 + 11.9 0.000 Intergenic Intergenic -42139 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr1-3544 chr1 225919966 225920176 + 11.9 0.000 3' UTR (NM_013328, exon 7 of 7) 3' UTR (NM_013328, exon 7 of 7) 2071 NR_106799 102466270 NR_106799 ENSG00000284519 MIR6741 hsa-mir-6741 microRNA 6741 ncRNA chr2-3200 chr2 218043101 218043311 + 11.9 0.000 intron (NR_034176, intron 2 of 13) MER52D|LTR|ERV1 8272 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr1-8659 chr1 205827024 205827234 + 11.9 0.000 TTS (NR_135186) TTS (NR_135186) -13931 NM_173854 254428 Hs.20274 NM_173854 ENSG00000133065 SLC41A1 MgtE solute carrier family 41 member 1 protein-coding chr8-4555 chr8 125525984 125526194 + 11.9 0.000 Intergenic HERV16-int|LTR|ERVL 93880 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr7-3428 chr7 151960466 151960676 + 11.9 0.000 intron (NR_033169, intron 2 of 9) LTR16|LTR|ERVL 4125 NM_145292 168391 Hs.647077 NM_145292 ENSG00000106648 GALNTL5 GALNACT19|GALNT15|GalNAc-T5L polypeptide N-acetylgalactosaminyltransferase like 5 protein-coding chr18-2141 chr18 56549649 56549859 + 11.9 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 88838 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr20-367 chr20 36050884 36051094 + 11.9 0.000 promoter-TSS (NR_027451) promoter-TSS (NR_027451) -29 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr22-2833 chr22 43748147 43748357 + 11.9 0.000 intron (NM_198856, intron 4 of 29) intron (NM_198856, intron 4 of 29) 64053 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr3-4062 chr3 79872581 79872791 + 11.9 0.000 Intergenic Intergenic -104688 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr16-2844 chr16 84795482 84795692 + 11.9 0.000 Intergenic LTR90A|LTR|LTR -24398 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr17-3839 chr17 43769380 43769590 + 11.9 0.000 3' UTR (NM_004090, exon 3 of 3) 3' UTR (NM_004090, exon 3 of 3) 9492 NM_004090 1845 Hs.181046 NM_004090 ENSG00000108861 DUSP3 VHR dual specificity phosphatase 3 protein-coding chr9-2264 chr9 100028190 100028400 + 11.9 0.000 intron (NM_015051, intron 4 of 11) intron (NM_015051, intron 4 of 11) 70705 NM_015051 23071 Hs.154023 NM_015051 ENSG00000023318 ERP44 PDIA10|TXNDC4 endoplasmic reticulum protein 44 protein-coding chr3-6846 chr3 149200019 149200229 + 11.9 0.000 intron (NM_000096, intron 7 of 18) intron (NM_000096, intron 7 of 18) 21705 NM_000096 1356 Hs.558314 NM_000096 ENSG00000047457 CP CP-2 ceruloplasmin protein-coding chr12-2518 chr12 93198162 93198372 + 11.9 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) 23901 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr12-2997 chr12 121894785 121894995 + 11.9 0.000 intron (NR_048555, intron 2 of 4) intron (NR_048555, intron 2 of 4) 6100 NM_001261400 5715 Hs.131151 NM_002813 ENSG00000110801 PSMD9 Rpn4|p27 proteasome 26S subunit, non-ATPase 9 protein-coding chr15-1106 chr15 79437510 79437720 + 11.9 0.000 intron (NM_015206, intron 1 of 3) intron (NM_015206, intron 1 of 3) 5099 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr19-2250 chr19 50424640 50424850 + 11.9 0.000 intron (NM_001244000, intron 5 of 5) AluSc|SINE|Alu 5807 NM_001243999 6689 Hs.437905 NM_003121 ENSG00000269404 SPIB SPI-B Spi-B transcription factor protein-coding chr4-6031 chr4 2044696 2044906 + 11.9 0.000 TTS (NM_001141936) TTS (NM_001141936) 2806 NM_001141936 401115 Hs.446474 NM_001141936 ENSG00000243449 C4orf48 CHR4_55 chromosome 4 open reading frame 48 protein-coding chr5-3024 chr5 11261014 11261224 + 11.9 0.000 intron (NM_001288715, intron 8 of 20) intron (NM_001288715, intron 8 of 20) 327798 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr3-4513 chr3 106131013 106131223 + 11.9 0.000 Intergenic Intergenic -261717 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr5-4547 chr5 18109172 18109382 + 11.9 0.000 Intergenic Intergenic 302003 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr4-1524 chr4 124032870 124033080 + 11.9 0.000 Intergenic Intergenic 258711 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr10-1539 chr10 88158084 88158294 + 11.9 0.000 Intergenic Intergenic 294564 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr16-1873 chr16 82738811 82739021 + 11.9 0.000 intron (NM_001220488, intron 2 of 14) L2c|LINE|L2 -34403 NR_110938 101928446 Hs.684007 NR_110938 ENSG00000260862 LOC101928446 - uncharacterized LOC101928446 ncRNA chr18-533 chr18 79156824 79157034 + 11.9 0.000 intron (NR_148360, intron 7 of 31) intron (NR_148360, intron 7 of 31) 87535 NM_198531 374868 Hs.465475 NM_198531 ENSG00000166377 ATP9B ATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1 ATPase phospholipid transporting 9B (putative) protein-coding chr2-4058 chr2 113325016 113325226 + 11.9 0.000 Intergenic CpG -46200 NM_013992 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr9-5530 chr9 107976541 107976751 + 11.9 0.000 Intergenic L2c|LINE|L2 -486877 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr1-5750 chr1 111275134 111275344 + 11.9 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -5285 NR_003928 149620 Hs.736960 NM_001013621 ENSG00000203878 CHIAP2 - chitinase, acidic pseudogene 2 pseudo chr9-2071 chr9 38383581 38383791 + 11.9 0.000 Intergenic Intergenic -9016 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr21-999 chr21 14955823 14956033 + 11.9 0.000 Intergenic Intergenic -37260 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr11-1866 chr11 121452287 121452497 + 11.9 0.000 promoter-TSS (NM_003105) promoter-TSS (NM_003105) 78 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr12-2824 chr12 120262343 120262553 + 11.9 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 3282 NM_001080855 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr7-3897 chr7 112770279 112770489 + 11.9 0.000 intron (NM_022484, intron 4 of 4) intron (NM_022484, intron 4 of 4) 20009 NM_022484 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding chr13-771 chr13 23796625 23796835 + 11.9 0.000 intron (NM_005932, intron 16 of 18) intron (NM_005932, intron 16 of 18) -92138 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr6-4538 chr6 40271588 40271798 + 11.9 0.000 Intergenic L2a|LINE|L2 84313 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr3-2400 chr3 188207056 188207266 + 11.9 0.000 intron (NM_001167672, intron 1 of 9) intron (NM_001167672, intron 1 of 9) -5772 NM_005578 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr19-1107 chr19 4121960 4122170 + 11.9 0.000 intron (NM_030662, intron 1 of 10) intron (NM_030662, intron 1 of 10) 2064 NM_030662 5605 Hs.465627 NM_030662 ENSG00000126934 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding chr17-1253 chr17 29607861 29608071 + 11.9 0.000 intron (NM_152345, intron 2 of 14) intron (NM_152345, intron 2 of 14) 10151 NM_001351301 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chr7-3571 chr7 22136825 22137035 + 11.9 0.000 intron (NM_001367601, intron 12 of 13) intron (NM_001367601, intron 12 of 13) 56815 NM_001367601 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr10-2953 chr10 36635045 36635255 + 11.9 0.000 Intergenic Intergenic -490707 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr12-2943 chr12 93978684 93978894 + 11.9 0.000 Intergenic MIR3|SINE|MIR -35183 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr8-2825 chr8 127878401 127878611 + 11.9 0.000 intron (NR_003367, intron 1 of 8) MIRb|SINE|MIR 70217 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr13-1141 chr13 29994185 29994395 + 11.9 0.000 Intergenic Intergenic 57759 NR_033889 440131 Hs.132371 NM_001010918 LINC00544 - long intergenic non-protein coding RNA 544 ncRNA chr8-1519 chr8 78560761 78560971 + 11.9 0.000 intron (NM_181839, intron 1 of 2) MIRb|SINE|MIR -2363 NR_125389 101927003 Hs.614849 NR_125389 ENSG00000254266 PKIA-AS1 - PKIA antisense RNA 1 ncRNA chr12-4128 chr12 68094193 68094403 + 11.9 0.000 Intergenic Intergenic 65442 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr6-2426 chr6 158234457 158234667 + 11.9 0.000 Intergenic Intergenic 66215 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr13-764 chr13 109156334 109156544 + 11.9 0.000 intron (NM_015011, intron 32 of 34) intron (NM_015011, intron 32 of 34) 10864 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr2-7718 chr2 33987430 33987640 + 11.9 0.000 intron (NR_126403, intron 4 of 5) MSTB-int|LTR|ERVL-MaLR -79691 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr12-3404 chr12 105359921 105360131 + 11.9 0.000 intron (NM_001145199, intron 2 of 5) intron (NM_001145199, intron 2 of 5) 29335 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr3-2435 chr3 32177961 32178171 + 11.9 0.000 Intergenic Intergenic -60613 NM_001320308 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr17-7018 chr17 55344583 55344793 + 11.9 0.000 Intergenic Intergenic 77147 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr16-3515 chr16 23856731 23856941 + 11.9 0.000 intron (NM_002738, intron 2 of 16) MER112|DNA|hAT-Charlie 20853 NM_002738 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr6-2116 chr6 1526621 1526831 + 11.9 0.000 Intergenic Intergenic -78805 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript ncRNA chr6-2432 chr6 160355035 160355245 + 11.9 0.000 intron (NM_021977, intron 1 of 10) MLT1J2|LTR|ERVL-MaLR 6762 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr9-1607 chr9 121819838 121820048 + 11.9 0.000 Intergenic Intergenic 77158 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr22-1707 chr22 12622124 12622334 + 11.9 0.000 Intergenic Intergenic 724823 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr20-958 chr20 36147837 36148047 + 11.9 0.000 non-coding (NR_147703, exon 4 of 4) non-coding (NR_147703, exon 4 of 4) -6798 NM_012156 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr9-3689 chr9 102992997 102993207 + 11.9 0.000 Intergenic Intergenic -2231 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr14-921 chr14 99596127 99596337 + 11.9 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 7975 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr19-2700 chr19 18736549 18736759 + 11.9 0.000 intron (NM_015321, intron 1 of 13) L2|LINE|L2 52974 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr10-4284 chr10 9328124 9328334 + 11.9 0.000 Intergenic AluSc|SINE|Alu -32636 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 - uncharacterized LOC101928272 ncRNA chr9-7724 chr9 73696419 73696629 + 11.9 0.000 Intergenic Intergenic 544659 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr9-7975 chr9 92496584 92496794 + 11.9 0.000 intron (NM_001197295, intron 9 of 9) intron (NM_001197295, intron 9 of 9) -14183 NM_017680 54829 Hs.435655 NM_017680 ENSG00000106819 ASPN OS3|PLAP-1|PLAP1|SLRR1C asporin protein-coding chr5-2919 chr5 134180883 134181093 + 11.9 0.000 Intergenic MamGypLTR2b|LTR|Gypsy -3955 NM_006930 6500 Hs.171626 NM_006930 ENSG00000113558 SKP1 EMC19|OCP-II|OCP2|SKP1A|TCEB1L|p19A S-phase kinase associated protein 1 protein-coding chr7-1887 chr7 128190285 128190495 + 11.9 0.000 Intergenic LTR16A|LTR|ERVL -17482 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr1-3634 chr1 52404807 52405017 + 11.9 0.000 promoter-TSS (NM_001190819) promoter-TSS (NM_001190819) 310 NM_032864 84950 Hs.5301 NM_032284 ENSG00000134748 PRPF38A PRP38A|Prp38 pre-mRNA processing factor 38A protein-coding chr1-7174 chr1 208533992 208534202 + 11.9 0.000 Intergenic Intergenic -194591 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr1-2496 chr1 165383125 165383335 + 11.9 0.000 Intergenic Intergenic -26515 NM_177398 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr1-7130 chr1 203606318 203606528 + 11.9 0.000 Intergenic Intergenic -20364 NM_001001396 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr1-7465 chr1 76951171 76951381 + 11.9 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 83796 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr11-5091 chr11 117418933 117419143 + 11.9 0.000 Intergenic MIRb|SINE|MIR 91184 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr13-1179 chr13 40982890 40983100 + 11.9 0.000 promoter-TSS (NM_001145353) promoter-TSS (NM_001145353) -96 NM_001370331 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr4-1973 chr4 159160428 159160638 + 11.9 0.000 intron (NM_001351724, intron 1 of 30) intron (NM_001351724, intron 1 of 30) -31639 NR_037459 100500881 NR_037459 ENSG00000264105 MIR3688-1 MIR3688|mir-3688-1 microRNA 3688-1 ncRNA chr18-1740 chr18 6629744 6629954 + 11.9 0.000 Intergenic Intergenic -99867 NM_001366231 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr17-3944 chr17 61551307 61551517 + 11.9 0.000 Intergenic Intergenic 39807 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr1-6760 chr1 71909137 71909347 + 11.9 0.000 intron (NM_173808, intron 2 of 6) intron (NM_173808, intron 2 of 6) -72230 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr8-4066 chr8 64816928 64817138 + 11.9 0.000 Intergenic Intergenic -18296 NM_004820 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr13-732 chr13 99578742 99578952 + 11.9 0.000 intron (NR_126390, intron 2 of 3) intron (NR_126390, intron 2 of 3) 1735 NR_126390 104355149 Hs.639387 NR_126390 LINC01039 - long intergenic non-protein coding RNA 1039 ncRNA chr12-3516 chr12 128939562 128939772 + 11.9 0.000 intron (NM_001366886, intron 8 of 11) MSTA|LTR|ERVL-MaLR 86189 NM_001366886 144423 Hs.655668 NM_144669 ENSG00000151948 GLT1D1 - glycosyltransferase 1 domain containing 1 protein-coding chr12-1098 chr12 120263265 120263475 + 11.9 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 2360 NM_001080855 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr1-2994 chr1 202806794 202807004 + 11.9 0.000 intron (NM_001314042, intron 1 of 27) CpG 2571 NM_001314042 10765 Hs.18891 NM_006618 ENSG00000117139 KDM5B CT31|JARID1B|MRT65|PLU-1|PLU1|PPP1R98|PUT1|RBBP2H1A|RBP2-H1 lysine demethylase 5B protein-coding chr17-2061 chr17 61314642 61314852 + 11.9 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 52957 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr7-1432 chr7 45089060 45089270 + 11.9 0.000 promoter-TSS (NM_001146334) promoter-TSS (NM_001146334) -196 NM_001146334 23148 Hs.96633 NM_001146334 ENSG00000136274 NACAD - NAC alpha domain containing protein-coding chr2-1462 chr2 36568668 36568878 + 11.9 0.000 intron (NM_001042548, intron 5 of 8) intron (NM_001042548, intron 5 of 8) 29395 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr17-3144 chr17 45250793 45251003 + 11.9 0.000 intron (NR_110325, intron 2 of 4) intron (NR_110325, intron 2 of 4) 2973 NR_024434 100133991 Hs.668927 NR_024434 ENSG00000267278 MAP3K14-AS1 - MAP3K14 antisense RNA 1 ncRNA chr1-6986 chr1 165222110 165222320 + 11.9 0.000 intron (NM_177398, intron 4 of 8) intron (NM_177398, intron 4 of 8) 134026 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr5-2184 chr5 138696681 138696891 + 11.9 0.000 Intergenic Intergenic 56523 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr20-563 chr20 62729584 62729794 + 11.9 0.000 intron (NM_002531, intron 1 of 3) AluSx1|SINE|Alu 20853 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr18-538 chr18 7790238 7790448 + 11.9 0.000 intron (NM_002845, intron 2 of 30) intron (NM_002845, intron 2 of 30) 223027 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr13-1653 chr13 68692188 68692398 + 11.9 0.000 Intergenic L1ME1|LINE|L1 193032 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr2-1811 chr2 53971041 53971251 + 11.9 0.000 promoter-TSS (NM_001320586) promoter-TSS (NM_001320586) 33 NM_001320587 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr5-1198 chr5 74468377 74468587 + 11.9 0.000 intron (NR_126354, intron 2 of 2) intron (NR_126354, intron 2 of 2) 68494 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA chr3-1897 chr3 149319808 149320018 + 11.9 0.000 3' UTR (NM_138786, exon 6 of 6) 3' UTR (NM_138786, exon 6 of 6) 13525 NM_001184723 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr4-2542 chr4 72026408 72026618 + 11.9 0.000 Intergenic Intergenic -5291 NM_004885 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr10-2475 chr10 27702194 27702404 + 11.9 0.000 intron (NM_001242702, intron 5 of 6) intron (NM_001242702, intron 5 of 6) -42316 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr2-2946 chr2 13164793 13165003 + 11.9 0.000 Intergenic HERVH-int|LTR|ERV1 -157885 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr2-2175 chr2 11391725 11391935 + 11.9 0.000 Intergenic Intergenic -2151 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA chr10-3345 chr10 13788006 13788216 + 11.9 0.000 intron (NM_001318336, intron 4 of 23) MER74A|LTR|ERVL -80544 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr8-3086 chr8 24318299 24318509 + 11.9 0.000 intron (NM_014265, intron 6 of 22) L2a|LINE|L2 24335 NM_014265 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr11-2860 chr11 10694722 10694932 + 11.9 0.000 promoter-TSS (NM_001206881) promoter-TSS (NM_001206881) -839 NM_001206880 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr11-7120 chr11 124500905 124501115 + 11.9 0.000 Intergenic Intergenic 42644 NM_001005195 219858 Hs.553634 NM_001005195 ENSG00000170953 OR8B12 OR11-317 olfactory receptor family 8 subfamily B member 12 protein-coding chr9-2187 chr9 133630991 133631201 + 11.9 0.000 Intergenic Intergenic -5267 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr17-2699 chr17 58081160 58081370 + 11.9 0.000 non-coding (NR_110809, exon 2 of 3) non-coding (NR_110809, exon 2 of 3) 1939 NR_110809 101927666 Hs.552237 NR_110809 ENSG00000266290 LOC101927666 - uncharacterized LOC101927666 ncRNA chr22-1727 chr22 20281485 20281695 + 11.9 0.000 Intergenic Intergenic -13272 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chrX-393 chrX 2890074 2890284 + 11.9 0.000 Intergenic Intergenic -14725 NR_144459 100506356 Hs.528631 NR_144459 ENSG00000229851 ARSD-AS1 - ARSD antisense RNA 1 ncRNA chr20-2413 chr20 21324618 21324828 + 11.9 0.000 intron (NM_001317960, intron 1 of 29) AluJr|SINE|Alu 21225 NM_001317960 22803 Hs.255932 NM_012255 ENSG00000088930 XRN2 - 5'-3' exoribonuclease 2 protein-coding chr16-2977 chr16 14181947 14182157 + 11.9 0.000 intron (NM_001308142, intron 3 of 16) intron (NM_001308142, intron 3 of 16) -4634 NM_001365415 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr17-3089 chr17 82349702 82349912 + 11.9 0.000 Intergenic Intergenic -9440 NM_207459 400629 Hs.231897 NM_207459 ENSG00000182459 TEX19 - testis expressed 19 protein-coding chr2-4487 chr2 2162096 2162306 + 11.9 0.000 intron (NM_015025, intron 3 of 24) intron (NM_015025, intron 3 of 24) -157031 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr7-3070 chr7 527610 527820 + 11.9 0.000 Intergenic Intergenic 7324 NR_033963 441307 Hs.521334 NR_033963 ENSG00000223855 HRAT92 - heart tissue-associated transcript 92 ncRNA chr7-4026 chr7 151901177 151901387 + 11.9 0.000 Intergenic Intergenic -24167 NM_016203 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr16-678 chr16 88731863 88732073 + 11.9 0.000 intron (NM_001142864, intron 21 of 50) intron (NM_001142864, intron 21 of 50) 788 NR_103774 100289580 Hs.437712 NM_207451 LOC100289580 - uncharacterized LOC100289580 ncRNA chr11-5391 chr11 66239441 66239651 + 11.9 0.000 intron (NM_018026, intron 21 of 23) intron (NM_018026, intron 21 of 23) -17748 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr11-2973 chr11 83001995 83002205 + 11.9 0.000 intron (NM_001286060, intron 1 of 4) MIRb|SINE|MIR 32174 NM_001286059 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr9-5854 chr9 130478060 130478270 + 11.9 0.000 intron (NM_054012, intron 9 of 14) intron (NM_054012, intron 9 of 14) 33204 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr4-1456 chr4 145154699 145154909 + 11.9 0.000 intron (NM_001366057, intron 10 of 20) MER20|DNA|hAT-Charlie 23354 NM_017493 54726 Hs.270851 NM_017493 ENSG00000164164 OTUD4 DUBA6|HIN1|HSHIN1 OTU deubiquitinase 4 protein-coding chr3-1701 chr3 42118939 42119149 + 11.9 0.000 intron (NM_001349247, intron 1 of 16) intron (NM_001349247, intron 1 of 16) 27687 NM_001265608 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr22-2079 chr22 15422789 15422999 + 11.9 0.000 Intergenic CER|Satellite|Satellite -105265 NM_001005239 81061 Hs.554706 NM_001005239 ENSG00000130538 OR11H1 OR11H12|OR22-1 olfactory receptor family 11 subfamily H member 1 protein-coding chr14-718 chr14 105013152 105013362 + 11.9 0.000 intron (NM_017955, intron 1 of 1) intron (NM_017955, intron 1 of 1) 7826 NM_017955 55038 Hs.34045 NM_017955 ENSG00000170779 CDCA4 HEPP|SEI-3/HEPP cell division cycle associated 4 protein-coding chr10-3566 chr10 79914625 79914835 + 11.9 0.000 intron (NR_033857, intron 3 of 5) MER63B|DNA|hAT-Blackjack -5448 NR_002724 8512 Hs.733579 NR_002724 ENSG00000242600 MBL1P COLEC3P|MBL1P1 mannose binding lectin 1, pseudogene pseudo chr10-3242 chr10 116211613 116211823 + 11.9 0.000 intron (NM_005264, intron 4 of 10) intron (NM_005264, intron 4 of 10) -16929 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr3-2874 chr3 46282223 46282433 + 11.9 0.000 Intergenic ERVL-E-int|LTR|ERVL 39868 NM_178329 1232 Hs.506190 NM_001837 ENSG00000183625 CCR3 CC-CKR-3|CD193|CKR3|CMKBR3 C-C motif chemokine receptor 3 protein-coding chr6-2133 chr6 5208070 5208280 + 11.9 0.000 intron (NM_001164840, intron 2 of 2) intron (NM_001164840, intron 2 of 2) 52775 NR_134856 57128 Hs.387755 NM_020408 ENSG00000214113 LYRM4 C6orf149|CGI-203|COXPD19|ISD11 LYR motif containing 4 protein-coding chr7-1404 chr7 12757477 12757687 + 11.9 0.000 Intergenic Intergenic 69949 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr11-3699 chr11 6050430 6050640 + 11.9 0.000 Intergenic Intergenic -22794 NM_001001917 120796 Hs.553543 NM_001001917 ENSG00000180934 OR56A1 OR11-75 olfactory receptor family 56 subfamily A member 1 protein-coding chr12-3299 chr12 77070436 77070646 + 11.9 0.000 Intergenic MamRep1527|LTR|LTR -4972 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr11-3129 chr11 44674725 44674935 + 11.9 0.000 Intergenic L1MD3|LINE|L1 -52132 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr17-2392 chr17 79473376 79473586 + 11.9 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 42667 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr6-3617 chr6 110458900 110459110 + 11.9 0.000 intron (NM_033125, intron 1 of 7) (TG)n|Simple_repeat|Simple_repeat 17608 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr1-1993 chr1 11099668 11099878 + 11.9 0.000 promoter-TSS (NR_135061) promoter-TSS (NR_135061) 96 NM_002685 5394 Hs.632368 NM_002685 ENSG00000171824 EXOSC10 PM-Scl|PM/Scl-100|PMSCL|PMSCL2|RRP6|Rrp6p|p2|p3|p4 exosome component 10 protein-coding chr18-1006 chr18 45361127 45361337 + 11.9 0.000 intron (NM_001371319, intron 4 of 23) intron (NM_001371319, intron 4 of 23) 145804 NR_110899 101927980 Hs.591058 NR_110899 SLC14A2-AS1 - SLC14A2 antisense RNA 1 ncRNA chr2-6825 chr2 62802159 62802369 + 11.9 0.000 intron (NM_001142615, intron 5 of 22) MER20|DNA|hAT-Charlie 95367 NM_001354217 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr4-3038 chr4 137510870 137511080 + 11.9 0.000 Intergenic Intergenic 21519 NM_001300828 54510 Hs.591691 NM_019035 ENSG00000189184 PCDH18 PCDH68L protocadherin 18 protein-coding chr17-3055 chr17 80630529 80630739 + 11.9 0.000 intron (NM_020761, intron 2 of 33) MLT2C1|LTR|ERVL 85796 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr7-2404 chr7 66095259 66095469 + 11.9 0.000 Intergenic Intergenic -19454 NM_001040648 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr5-1645 chr5 172052616 172052826 + 11.9 0.000 intron (NM_005990, intron 18 of 18) intron (NM_005990, intron 18 of 18) -45848 NM_012300 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr2-2151 chr2 197205117 197205327 + 11.9 0.000 intron (NM_153697, intron 1 of 9) L1P3|LINE|L1 7231 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr12-2212 chr12 45388639 45388849 + 11.9 0.000 intron (NM_001025356, intron 11 of 19) intron (NM_001025356, intron 11 of 19) 96054 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr5-5130 chr5 103623212 103623422 + 11.9 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -60528 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr1-10555 chr1 172352713 172352923 + 11.9 0.000 intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -67867 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr11-4251 chr11 65299417 65299627 + 11.9 0.000 TTS (NM_002689) TTS (NM_002689) -15344 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr11-2262 chr11 120546622 120546832 + 11.9 0.000 intron (NM_014619, intron 1 of 20) intron (NM_014619, intron 1 of 20) -17709 NM_001282470 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr13-1200 chr13 49859427 49859637 + 11.9 0.000 Intergenic ERVL-E-int|LTR|ERVL -30877 NR_003268 220429 Hs.448219 NR_003268 ENSG00000181358 CTAGE10P - CTAGE family member 10, pseudogene pseudo chr1-8409 chr1 85134724 85134934 + 11.9 0.000 TTS (NR_039619) TTS (NR_039619) 1035 NR_039619 100616481 NR_039619 ENSG00000266110 MIR4423 mir-4423 microRNA 4423 ncRNA chr6-3621 chr6 112007377 112007587 + 11.9 0.000 Intergenic L2c|LINE|L2 -46593 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 CCN6 LIBC|PPAC|PPD|WISP-3|WISP3 cellular communication network factor 6 protein-coding chr13-2020 chr13 40787065 40787275 + 11.9 0.000 Intergenic LTR8|LTR|ERV1 -2441 NM_014252 10166 Hs.646645 NM_014252 ENSG00000102743 SLC25A15 D13S327|HHH|ORC1|ORNT1 solute carrier family 25 member 15 protein-coding chr16-2388 chr16 67672997 67673207 + 11.9 0.000 Intergenic Intergenic 6288 NM_001012984 388284 Hs.632208 NM_001012984 ENSG00000159761 C16orf86 - chromosome 16 open reading frame 86 protein-coding chr1-5663 chr1 33316931 33317141 + 11.9 0.000 intron (NM_001080438, intron 1 of 4) L2c|LINE|L2 4062 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding chr4-3892 chr4 144721990 144722200 + 11.9 0.000 intron (NM_022475, intron 11 of 12) intron (NM_022475, intron 11 of 12) 75939 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chrX-2917 chrX 152204515 152204725 + 11.9 0.000 intron (NM_000808, intron 7 of 9) MIR|SINE|MIR -66042 NM_001011543 4109 Hs.18048 NM_021048 ENSG00000124260 MAGEA10 CT1.10|MAGE10 MAGE family member A10 protein-coding chr22-1670 chr22 43527009 43527219 + 11.9 0.000 intron (NR_046563, intron 2 of 2) intron (NR_046563, intron 2 of 2) 10860 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr15-2177 chr15 82126419 82126629 + 11.9 0.000 Intergenic Intergenic 37930 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr19-3351 chr19 10362233 10362443 + 11.9 0.000 exon (NM_003331, exon 11 of 25) exon (NM_003331, exon 11 of 25) 18234 NM_003331 7297 Hs.75516 NM_003331 ENSG00000105397 TYK2 IMD35|JTK1 tyrosine kinase 2 protein-coding chr5-1824 chr5 89668884 89669094 + 11.9 0.000 Intergenic Intergenic 347731 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr16-1495 chr16 4775031 4775241 + 11.9 0.000 Intergenic Intergenic -7974 NM_001303450 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr9-2851 chr9 128145950 128146160 + 11.9 0.000 Intergenic Intergenic -3398 NM_005564 3934 Hs.204238 NM_005564 ENSG00000148346 LCN2 24p3|MSFI|NGAL|p25 lipocalin 2 protein-coding chr7-4155 chr7 99589621 99589831 + 11.9 0.000 Intergenic SATR1|Satellite|Satellite -8541 NM_001195542 100289187 Hs.729333 NM_001195541 ENSG00000244219 TMEM225B GS1-259H13.2 transmembrane protein 225B protein-coding chr2-4951 chr2 177053333 177053543 + 11.9 0.000 Intergenic AluSc|SINE|Alu 158973 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr10-5304 chr10 70377977 70378187 + 11.9 0.000 intron (NM_001278212, intron 1 of 4) MIRb|SINE|MIR -1303 NM_001278213 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 - leucine rich repeat containing 20 protein-coding chr13-2806 chr13 102177067 102177277 + 11.9 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) -131168 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr12-3355 chr12 92735323 92735533 + 11.9 0.000 Intergenic Intergenic -1061 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 - pleckstrin homology and RhoGEF domain containing G7 protein-coding chr5-4280 chr5 147448996 147449206 + 11.9 0.000 intron (NM_001197294, intron 1 of 13) intron (NM_001197294, intron 1 of 13) 4591 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr11-5950 chr11 16976635 16976845 + 11.9 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) 37674 NM_001329630 144100 Hs.12332 NM_175058 ENSG00000166689 PLEKHA7 - pleckstrin homology domain containing A7 protein-coding chr15-1966 chr15 39322028 39322238 + 11.9 0.000 Intergenic Intergenic 71464 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr4-2081 chr4 24770379 24770589 + 11.9 0.000 Intergenic Intergenic -25089 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr2-3060 chr2 97005537 97005747 + 11.9 0.000 Intergenic L1ME3G|LINE|L1 -19062 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr3-1440 chr3 29822148 29822358 + 11.9 0.000 intron (NM_001003792, intron 6 of 13) intron (NM_001003792, intron 6 of 13) 111903 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr15-2394 chr15 61131662 61131872 + 11.9 0.000 intron (NM_134261, intron 1 of 10) MIR3|SINE|MIR 97535 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr14-2000 chr14 54147379 54147589 + 11.9 0.000 Intergenic L1PB3|LINE|L1 -190593 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr17-2665 chr17 29949758 29949968 + 11.9 0.000 intron (NR_026738, intron 3 of 15) intron (NR_026738, intron 3 of 15) 8229 NM_198529 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr3-10994 chr3 179401698 179401908 + 11.9 0.000 intron (NM_021629, intron 9 of 9) intron (NM_021629, intron 9 of 9) 49667 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr16-4606 chr16 68992523 68992733 + 11.9 0.000 intron (NM_024562, intron 15 of 17) intron (NM_024562, intron 15 of 17) -113025 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr14-1684 chr14 80770277 80770487 + 11.9 0.000 intron (NM_152446, intron 16 of 24) intron (NM_152446, intron 16 of 24) 171356 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr3-3624 chr3 105459131 105459341 + 11.9 0.000 intron (NM_001243280, intron 1 of 14) L2c|LINE|L2 92327 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr3-7102 chr3 181663547 181663757 + 11.9 0.000 intron (NR_075090, intron 2 of 2) intron (NR_075090, intron 2 of 2) -48273 NM_003106 6657 Hs.518438 NM_003106 ENSG00000181449 SOX2 ANOP3|MCOPS3 SRY-box transcription factor 2 protein-coding chr15-4433 chr15 45157148 45157358 + 11.9 0.000 intron (NM_175940, intron 28 of 33) intron (NM_175940, intron 28 of 33) 23954 NM_001301171 90525 Hs.310399 NM_138356 ENSG00000138606 SHF - Src homology 2 domain containing F protein-coding chr12-2185 chr12 5238940 5239150 + 11.9 0.000 intron (NR_120477, intron 2 of 2) intron (NR_120477, intron 2 of 2) 4106 NR_120476 101929584 Hs.436529 NR_120476 ENSG00000256115 LINC02443 - long intergenic non-protein coding RNA 2443 ncRNA chr2-2345 chr2 197993880 197994090 + 11.9 0.000 intron (NM_006226, intron 1 of 5) LTR78|LTR|ERV1 189392 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr19-2982 chr19 30063853 30064063 + 11.9 0.000 Intergenic Intergenic 121719 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr11-2513 chr11 70005445 70005655 + 11.9 0.000 Intergenic Intergenic 58374 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr10-2091 chr10 119441466 119441676 + 11.9 0.000 intron (NM_005308, intron 10 of 15) intron (NM_005308, intron 10 of 15) 63599 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr17-3880 chr17 49648370 49648580 + 11.9 0.000 intron (NM_001007229, intron 1 of 10) L2b|LINE|L2 -1957 NM_001370730 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding chr3-3319 chr3 186839927 186840137 + 11.9 0.000 Intergenic Intergenic -2678 NM_001177800 9370 Hs.80485 NM_004797 ENSG00000181092 ADIPOQ ACDC|ACRP30|ADIPQTL1|ADPN|APM-1|APM1|GBP28 adiponectin, C1Q and collagen domain containing protein-coding chr6-2353 chr6 132053543 132053753 + 11.9 0.000 Intergenic Intergenic 61615 NR_039673 100616191 NR_039673 ENSG00000265669 MIR548AJ1 - microRNA 548aj-1 ncRNA chr1-3685 chr1 162024259 162024469 + 11.9 0.000 5' UTR (NM_001297713, exon 1 of 8) 5' UTR (NM_001297713, exon 1 of 8) 101 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr16-4536 chr16 64412966 64413176 + 11.9 0.000 Intergenic L1PA15-16|LINE|L1 708992 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr12-3051 chr12 5085889 5086099 + 11.9 0.000 Intergenic Intergenic 42115 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr10-3199 chr10 97573177 97573387 + 11.9 0.000 intron (NM_020349, intron 1 of 8) intron (NM_020349, intron 1 of 8) 503 NM_001346793 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr10-4496 chr10 84660177 84660387 + 11.9 0.000 Intergenic Intergenic 235113 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr2-7501 chr2 19435781 19435991 + 11.9 0.000 Intergenic Intergenic -77263 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr11-7155 chr11 127859933 127860143 + 11.9 0.000 Intergenic Intergenic -348728 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr1-4158 chr1 16155008 16155218 + 11.9 0.000 intron (NM_004431, intron 1 of 16) CpG 956 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr1-6385 chr1 9603455 9603665 + 11.9 0.000 3' UTR (NM_001010866, exon 6 of 6) 3' UTR (NM_001010866, exon 6 of 6) 14649 NM_001130924 199953 Hs.632365 NM_001010866 ENSG00000188807 TMEM201 Ima1|NET5|SAMP1 transmembrane protein 201 protein-coding chr10-7008 chr10 74181395 74181605 + 11.9 0.000 intron (NM_001369124, intron 1 of 9) intron (NM_001369124, intron 1 of 9) 4737 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chrX-1419 chrX 32752832 32753042 + 11.9 0.000 intron (NM_000109, intron 7 of 78) THE1B|LTR|ERVL-MaLR -111378 NR_031646 100302239 NR_031646 ENSG00000221348 MIR548F5 MIR548F-5|MIRN548F5|hsa-mir-548f-5 microRNA 548f-5 ncRNA chr9-2009 chr9 133838653 133838863 + 11.9 0.000 intron (NM_001134398, intron 3 of 29) (ATGG)n|Simple_repeat|Simple_repeat -98803 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr6-5074 chr6 116561501 116561711 + 11.9 0.000 TTS (NM_001256887) TTS (NM_001256887) 8475 NM_001366078 221301 Hs.350750 NM_153036 ENSG00000164451 CALHM4 C6orf78|FAM26D calcium homeostasis modulator family member 4 protein-coding chr2-5610 chr2 184033919 184034129 + 11.9 0.000 Intergenic Intergenic -344951 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr3-9207 chr3 37289572 37289782 + 11.9 0.000 intron (NM_001172713, intron 6 of 22) HAL1M8|LINE|L1 -45482 NR_149029 152048 Hs.596176 NM_152532 ENSG00000270194 LOC152048 - uncharacterized FLJ31715 ncRNA chr19-1196 chr19 50428085 50428295 + 11.9 0.000 exon (NM_003121, exon 6 of 6) exon (NM_003121, exon 6 of 6) -4702 NM_004533 4606 Hs.85937 NM_004533 ENSG00000086967 MYBPC2 MYBPC|MYBPCF myosin binding protein C, fast type protein-coding chr7-4416 chr7 101782260 101782470 + 11.9 0.000 Intergenic Intergenic -33642 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr12-2015 chr12 41188483 41188693 + 11.9 0.000 exon (NM_001164595, exon 1 of 10) exon (NM_001164595, exon 1 of 10) 268 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr16-2124 chr16 3263642 3263852 + 11.9 0.000 promoter-TSS (NR_033904) promoter-TSS (NR_033904) -21 NR_033904 283876 Hs.592092 NR_033904 ENSG00000281005 LINC00921 - long intergenic non-protein coding RNA 921 ncRNA chr16-2356 chr16 54135995 54136205 + 11.9 0.000 Intergenic Intergenic 96707 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr5-3405 chr5 145363980 145364190 + 11.9 0.000 Intergenic Intergenic 471257 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr4-1846 chr4 137906028 137906238 + 11.9 0.000 Intergenic L2a|LINE|L2 -182881 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr11-1265 chr11 3738628 3738838 + 11.9 0.000 intron (NM_001365129, intron 11 of 31) AluSz|SINE|Alu 58813 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chr12-2726 chr12 3150839 3151049 + 11.9 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 73565 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr6-2319 chr6 111658711 111658921 + 11.9 0.000 Intergenic Intergenic -52542 NM_001164281 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr5-1686 chr5 78506683 78506893 + 11.9 0.000 intron (NM_005779, intron 4 of 4) intron (NM_005779, intron 4 of 4) 141984 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr4-1971 chr4 156377294 156377504 + 11.9 0.000 Intergenic Intergenic -423533 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr14-2619 chr14 61301268 61301478 + 11.9 0.000 Intergenic Intergenic -20035 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr17-2931 chr17 50152121 50152331 + 11.9 0.000 Intergenic Intergenic -1549 NM_032595 84687 Hs.514323 NM_032595 ENSG00000108819 PPP1R9B PPP1R6|PPP1R9|SPINO|Spn protein phosphatase 1 regulatory subunit 9B protein-coding chr2-2501 chr2 158743591 158743801 + 11.9 0.000 Intergenic Intergenic -8694 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr3-9995 chr3 99669984 99670194 + 11.9 0.000 intron (NM_020351, intron 1 of 3) intron (NM_020351, intron 1 of 3) 31495 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr7-1961 chr7 103990164 103990374 + 11.9 0.000 promoter-TSS (NM_173054) promoter-TSS (NM_173054) -611 NM_005045 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr9-5141 chr9 37650038 37650248 + 11.9 0.000 promoter-TSS (NM_014907) promoter-TSS (NM_014907) -811 NM_014907 22844 Hs.163990 NM_014907 ENSG00000070601 FRMPD1 FRMD2 FERM and PDZ domain containing 1 protein-coding chr5-3412 chr5 147410977 147411187 + 11.9 0.000 intron (NM_001197294, intron 6 of 13) intron (NM_001197294, intron 6 of 13) 42610 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr2-5120 chr2 20355256 20355466 + 11.9 0.000 Intergenic FRAM|SINE|Alu -3108 NM_001352925 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr17-2202 chr17 78449950 78450160 + 11.9 0.000 intron (NM_173628, intron 68 of 80) intron (NM_173628, intron 68 of 80) -34855 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr13-1377 chr13 98821455 98821665 + 11.9 0.000 intron (NM_001366682, intron 45 of 53) intron (NM_001366682, intron 45 of 53) -10524 NR_046663 100874096 Hs.578066 NR_046663 ENSG00000229918 DOCK9-AS1 - DOCK9 antisense RNA 1 ncRNA chr2-2730 chr2 119683984 119684194 + 11.9 0.000 intron (NR_148341, intron 1 of 16) intron (NR_148341, intron 1 of 16) 4888 NR_148341 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr20-1204 chr20 11723301 11723511 + 11.9 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 147309 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr12-4944 chr12 70054733 70054943 + 11.9 0.000 Intergenic LTR81|LTR|Gypsy -188192 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr10-6303 chr10 101939722 101939932 + 11.9 0.000 intron (NM_024541, intron 23 of 25) intron (NM_024541, intron 23 of 25) -95907 NM_173192 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr4-2247 chr4 156999204 156999414 + 11.9 0.000 Intergenic Intergenic -27510 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr22-1572 chr22 43826668 43826878 + 11.9 0.000 intron (NM_014351, intron 6 of 6) intron (NM_014351, intron 6 of 6) -14468 NM_198856 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr4-4661 chr4 83394316 83394526 + 11.9 0.000 Intergenic Intergenic -59268 NM_001166498 10855 Hs.44227 NM_006665 ENSG00000173083 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding chr8-1279 chr8 27490891 27491101 + 11.9 0.000 promoter-TSS (NM_001256482) promoter-TSS (NM_001256482) -147 NM_001256483 2053 Hs.212088 NM_001979 ENSG00000120915 EPHX2 ABHD20|CEH|SEH epoxide hydrolase 2 protein-coding chr9-1305 chr9 127451636 127451846 + 11.9 0.000 promoter-TSS (NM_001005374) promoter-TSS (NM_001005374) 231 NM_001190723 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr8-4250 chr8 91672352 91672562 + 11.9 0.000 Intergenic MIRb|SINE|MIR 345223 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr7-3405 chr7 132372504 132372714 + 11.9 0.000 intron (NM_020911, intron 3 of 31) intron (NM_020911, intron 3 of 31) 111748 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr2-5663 chr2 199485140 199485350 + 11.9 0.000 Intergenic Intergenic -13979 NM_015265 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr11-2728 chr11 10117760 10117970 + 11.9 0.000 intron (NM_030962, intron 2 of 39) intron (NM_030962, intron 2 of 39) 176342 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr8-2253 chr8 66991832 66992042 + 11.9 0.000 intron (NM_001364910, intron 5 of 7) MER5A1|DNA|hAT-Charlie -29346 NM_001193502 100129654 Hs.120040 NM_001193502 ENSG00000261787 TCF24 TCF-24|bHLHa25 transcription factor 24 protein-coding chr10-2344 chr10 73264071 73264281 + 11.9 0.000 intron (NM_001367801, intron 26 of 27) L1MC4a|LINE|L1 11435 NR_134459 414245 Hs.568860 NR_038373 ENSG00000227540 DNAJC9-AS1 C10orf103|bA537A6.3 DNAJC9 antisense RNA 1 ncRNA chr4-1851 chr4 143514540 143514750 + 11.9 0.000 non-coding (NR_104027, exon 1 of 2) non-coding (NR_104027, exon 1 of 2) 192 NR_104027 100128055 Hs.707570 NR_104027 ENSG00000245112 SMARCA5-AS1 - SMARCA5 antisense RNA 1 ncRNA chr10-1972 chr10 31808706 31808916 + 11.9 0.000 intron (NM_001270696, intron 16 of 17) intron (NM_001270696, intron 16 of 17) 100115 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr1-8654 chr1 205581940 205582150 + 11.9 0.000 intron (NM_181644, intron 3 of 9) intron (NM_181644, intron 3 of 9) -12740 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr5-432 chr5 178547782 178547992 + 11.9 0.000 intron (NM_173465, intron 2 of 28) (CA)n|Simple_repeat|Simple_repeat 42506 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr2-4262 chr2 226644438 226644648 + 11.9 0.000 Intergenic L2|LINE|L2 14250 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr12-1722 chr12 28248459 28248669 + 11.9 0.000 intron (NM_001352082, intron 2 of 13) L2|LINE|L2 -57826 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr10-5792 chr10 106230067 106230277 + 11.9 0.000 Intergenic Intergenic 90007 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr4-2626 chr4 149161239 149161449 + 11.9 0.000 intron (NR_125887, intron 2 of 12) intron (NR_125887, intron 2 of 12) 7049 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr11-2200 chr11 46293710 46293920 + 11.9 0.000 intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 16153 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr2-2461 chr2 101473928 101474138 + 11.9 0.000 intron (NM_001367510, intron 1 of 10) CpG 1079 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr1-3942 chr1 99808751 99808961 + 11.9 0.000 Intergenic Intergenic -41505 NM_000642 178 Hs.904 NM_000028 ENSG00000162688 AGL GDE amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase protein-coding chr16-1505 chr16 19860567 19860777 + 11.9 0.000 intron (NM_016235, intron 3 of 3) intron (NM_016235, intron 3 of 3) 24176 NM_016235 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chrX-772 chrX 40141281 40141491 + 11.9 0.000 intron (NM_001123384, intron 1 of 13) intron (NM_001123384, intron 1 of 13) 35891 NM_001123384 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr16-2696 chr16 83940396 83940606 + 11.9 0.000 Intergenic L2b|LINE|L2 -12739 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr3-1176 chr3 156674438 156674648 + 11.9 0.000 promoter-TSS (NM_001184717) promoter-TSS (NM_001184717) -47 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr2-6674 chr2 15189247 15189457 + 11.9 0.000 intron (NR_052013, intron 48 of 50) intron (NR_052013, intron 48 of 50) 371982 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr5-4293 chr5 150081851 150082061 + 11.9 0.000 intron (NM_001288705, intron 1 of 20) intron (NM_001288705, intron 1 of 20) 4684 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr7-4618 chr7 24831206 24831416 + 11.9 0.000 intron (NM_015550, intron 15 of 22) intron (NM_015550, intron 15 of 22) 61310 NM_145320 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr6-2747 chr6 107956973 107957183 + 11.9 0.000 intron (NM_007214, intron 1 of 20) intron (NM_007214, intron 1 of 20) 1130 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr11-1859 chr11 107696282 107696492 + 11.9 0.000 Intergenic Intergenic 15669 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr19-2141 chr19 3856390 3856600 + 11.9 0.000 intron (NR_027149, intron 1 of 2) L1MB7|LINE|L1 12543 NM_015174 23217 Hs.65750 NM_015174 ENSG00000105278 ZFR2 KIAA1086 zinc finger RNA binding protein 2 protein-coding chr4-4059 chr4 3381436 3381646 + 11.9 0.000 intron (NM_198227, intron 1 of 15) THE1C|LTR|ERVL-MaLR 11343 NM_198227 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr7-1954 chr7 92403126 92403336 + 11.9 0.000 Intergenic LTR40c|LTR|ERVL 34083 NR_145992 105375396 NM_001317905 ENSG00000230927 TMBIM7P - transmembrane BAX inhibitor motif containing 7, pseudogene pseudo chr10-1462 chr10 87505487 87505697 + 11.9 0.000 intron (NM_001178117, intron 1 of 2) CpG 699 NM_004897 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding chr1-5041 chr1 86278108 86278318 + 11.9 0.000 Intergenic L1M1|LINE|L1 79474 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr16-4258 chr16 23030871 23031081 + 11.9 0.000 Intergenic Intergenic 118294 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr2-9103 chr2 205692108 205692318 + 11.9 0.000 intron (NM_018534, intron 1 of 15) intron (NM_018534, intron 1 of 15) 9712 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr8-1381 chr8 17083045 17083255 + 11.9 0.000 intron (NR_146233, intron 5 of 15) LTR8|LTR|ERV1 55912 NM_181723 286097 Hs.403594 NM_181723 ENSG00000155970 MICU3 EFHA2 mitochondrial calcium uptake family member 3 protein-coding chr10-2934 chr10 16832881 16833091 + 11.9 0.000 intron (NM_001081, intron 64 of 66) intron (NM_001081, intron 64 of 66) -15532 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr18-583 chr18 12337514 12337724 + 11.9 0.000 intron (NM_006796, intron 15 of 16) intron (NM_006796, intron 15 of 16) 29378 NM_032525 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr14-778 chr14 50944416 50944626 + 11.9 0.000 promoter-TSS (NM_001163940) promoter-TSS (NM_001163940) -38 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr4-2935 chr4 95250627 95250837 + 11.9 0.000 intron (NM_003728, intron 4 of 15) intron (NM_003728, intron 4 of 15) 159241 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr3-1698 chr3 38115096 38115306 + 11.9 0.000 intron (NM_007335, intron 27 of 36) intron (NM_007335, intron 27 of 36) 21926 NM_001607 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr2-2113 chr2 27993159 27993369 + 11.9 0.000 intron (NM_199193, intron 5 of 13) L2a|LINE|L2 -3103 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA chr8-4514 chr8 121513273 121513483 + 11.9 0.000 Intergenic HERVL74-int|LTR|ERVL -125968 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr1-3199 chr1 153614438 153614648 + 11.9 0.000 3' UTR (NM_020672, exon 4 of 4) 3' UTR (NM_020672, exon 4 of 4) -1406 NR_133645 140576 Hs.515714 NM_080388 ENSG00000188643 S100A16 AAG13|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding chr5-2609 chr5 134846717 134846927 + 11.9 0.000 intron (NM_001135586, intron 1 of 1) intron (NM_001135586, intron 1 of 1) 854 NM_001300894 134553 Hs.708536 NM_152409 ENSG00000181904 C5orf24 - chromosome 5 open reading frame 24 protein-coding chr1-1872 chr1 99850043 99850253 + 11.9 0.000 promoter-TSS (NM_000643) promoter-TSS (NM_000643) -213 NM_000642 178 Hs.904 NM_000028 ENSG00000162688 AGL GDE amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase protein-coding chr6-2326 chr6 112956785 112956995 + 11.9 0.000 Intergenic Intergenic 476557 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr12-2398 chr12 41014620 41014830 + 11.9 0.000 intron (NM_001843, intron 18 of 23) intron (NM_001843, intron 18 of 23) 106368 NM_175038 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr14-2369 chr14 34199687 34199897 + 11.9 0.000 Intergenic LFSINE_Vert|SINE|tRNA -248718 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr3-7213 chr3 192566802 192567012 + 11.9 0.000 intron (NM_004113, intron 2 of 5) intron (NM_004113, intron 2 of 5) 51885 NR_046598 100873987 Hs.628012 NR_046598 ENSG00000230126 FGF12-AS2 - FGF12 antisense RNA 2 ncRNA chr5-2766 chr5 158522106 158522316 + 11.9 0.000 Intergenic Intergenic -112438 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr7-2451 chr7 140002353 140002563 + 11.9 0.000 intron (NM_001366537, intron 8 of 11) intron (NM_001366537, intron 8 of 11) 61263 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr19-1619 chr19 47239709 47239919 + 11.9 0.000 Intergenic CpG -7147 NM_001127242 27113 Hs.467020 NM_014417 ENSG00000105327 BBC3 JFY-1|JFY1|PUMA BCL2 binding component 3 protein-coding chr9-4629 chr9 110995558 110995768 + 11.9 0.000 intron (NM_001351397, intron 1 of 4) intron (NM_001351397, intron 1 of 4) 41117 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr1-2078 chr1 41436843 41437053 + 11.9 0.000 Intergenic ERVL-E-int|LTR|ERVL 47735 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr20-714 chr20 51562649 51562859 + 11.9 0.000 promoter-TSS (NM_001136021) promoter-TSS (NM_001136021) 85 NM_001258292 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr1-3386 chr1 202456536 202456746 + 11.9 0.000 intron (NM_002481, intron 13 of 23) intron (NM_002481, intron 13 of 23) -6073 NM_032104 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr13-2361 chr13 38223185 38223395 + 11.9 0.000 Intergenic Intergenic -80058 NR_047500 100874188 Hs.569249 NR_047500 ENSG00000223685 LINC00571 - long intergenic non-protein coding RNA 571 ncRNA chr15-1006 chr15 72232290 72232500 + 11.9 0.000 promoter-TSS (NM_001206798) promoter-TSS (NM_001206798) -771 NM_182470 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr1-6081 chr1 105483217 105483427 + 11.9 0.000 Intergenic LTR49-int|LTR|ERV1 135613 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr16-3179 chr16 82694245 82694455 + 11.9 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 5419 NR_107025 102465863 NR_107025 ENSG00000277387 MIR8058 hsa-mir-8058 microRNA 8058 ncRNA chr11-1741 chr11 116946370 116946580 + 11.9 0.000 intron (NM_001366687, intron 3 of 4) LTR40b|LTR|ERVL -108525 NM_000039 335 Hs.93194 NM_000039 ENSG00000118137 APOA1 apo(a) apolipoprotein A1 protein-coding chr14-1277 chr14 75242664 75242874 + 11.9 0.000 Intergenic Intergenic -36059 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr4-2297 chr4 31674417 31674627 + 11.9 0.000 Intergenic Intergenic 167978 NR_149122 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr20-513 chr20 3820535 3820745 + 11.9 0.000 promoter-TSS (NM_001204447) promoter-TSS (NM_001204447) 93 NM_001204447 55317 Hs.104806 NM_018347 ENSG00000125843 AP5S1 C20orf29 adaptor related protein complex 5 subunit sigma 1 protein-coding chr8-1335 chr8 37737006 37737216 + 11.9 0.000 5' UTR (NM_001362880, exon 1 of 7) 5' UTR (NM_001362880, exon 1 of 7) 315 NR_125821 102723701 Hs.588388 NR_125821 ENSG00000183154 LOC102723701 - uncharacterized LOC102723701 ncRNA chr10-3511 chr10 70957415 70957625 + 11.9 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 18467 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr12-1066 chr12 124627087 124627297 + 11.9 0.000 Intergenic Intergenic -59580 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr19-3156 chr19 35024024 35024234 + 11.9 0.000 intron (NM_001320034, intron 18 of 18) intron (NM_001320034, intron 18 of 18) -6341 NM_199037 6324 Hs.436646 NM_001037 ENSG00000105711 SCN1B ATFB13|BRGDA5|EIEE52|GEFSP1 sodium voltage-gated channel beta subunit 1 protein-coding chr15-3190 chr15 70562841 70563051 + 11.9 0.000 Intergenic Intergenic 23660 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA chr7-3777 chr7 83786951 83787161 + 11.9 0.000 Intergenic LTR53|LTR|ERVL -137917 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr2-5706 chr2 212428799 212429009 + 11.9 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) -2544 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr1-8511 chr1 154567762 154567972 + 11.9 0.000 promoter-TSS (NM_000748) promoter-TSS (NM_000748) 89 NM_000748 1141 Hs.2306 NM_000748 ENSG00000160716 CHRNB2 EFNL3|nAChRB2 cholinergic receptor nicotinic beta 2 subunit protein-coding chr14-614 chr14 76961791 76962001 + 11.9 0.000 intron (NR_133913, intron 1 of 2) intron (NR_133913, intron 1 of 2) 2258 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr7-1164 chr7 1346324 1346534 + 11.9 0.000 Intergenic Intergenic 113041 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr12-6823 chr12 13102696 13102906 + 11.9 0.000 non-coding (NR_159953, exon 3 of 3) non-coding (NR_159953, exon 3 of 3) 866 NM_001367360 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr5-4768 chr5 54116093 54116303 + 11.9 0.000 intron (NM_019087, intron 3 of 4) LTR16A1|LTR|ERVL -164599 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr5-7014 chr5 156650374 156650584 + 11.9 0.000 intron (NM_001128209, intron 6 of 7) L1PA16|LINE|L1 -199816 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr6-394 chr6 105403081 105403291 + 11.9 0.000 promoter-TSS (NM_002726) promoter-TSS (NM_002726) -104 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr19-2725 chr19 33608051 33608261 + 11.9 0.000 Intergenic L1MC1|LINE|L1 -13797 NM_001127896 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr11-768 chr11 7513651 7513861 + 11.9 0.000 promoter-TSS (NM_001351855) promoter-TSS (NM_001351855) -9 NM_001351856 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr21-524 chr21 37392080 37392290 + 11.9 0.000 intron (NM_001347723, intron 1 of 10) intron (NM_001347723, intron 1 of 10) 24628 NM_101395 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr20-1736 chr20 45781495 45781705 + 11.9 0.000 intron (NM_080614, intron 4 of 6) MER68|LTR|ERVL 10283 NM_080614 140686 Hs.419126 NM_080614 ENSG00000124116 WFDC3 WAP14|dJ447F3.3 WAP four-disulfide core domain 3 protein-coding chr15-3255 chr15 75711477 75711687 + 11.9 0.000 intron (NM_001897, intron 1 of 9) intron (NM_001897, intron 1 of 9) 1266 NM_001897 1464 Hs.513044 NM_001897 ENSG00000173546 CSPG4 HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2 chondroitin sulfate proteoglycan 4 protein-coding chr10-2879 chr10 98460861 98461071 + 11.9 0.000 intron (NM_021828, intron 11 of 11) intron (NM_021828, intron 11 of 11) -14003 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr7-5480 chr7 42063737 42063947 + 11.9 0.000 intron (NM_000168, intron 4 of 14) MIRb|SINE|MIR 173367 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr15-2558 chr15 50571842 50572052 + 11.9 0.000 intron (NR_149154, intron 35 of 37) Tigger1|DNA|TcMar-Tigger -25281 NM_203494 373509 Hs.677758 NM_203494 ENSG00000170236 USP50 - ubiquitin specific peptidase 50 protein-coding chr6-2579 chr6 68954613 68954823 + 11.9 0.000 intron (NM_001704, intron 6 of 31) AluY|SINE|Alu 319436 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr5-3191 chr5 78527180 78527390 + 11.9 0.000 intron (NM_005779, intron 3 of 4) intron (NM_005779, intron 3 of 4) 121487 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr20-3860 chr20 25699767 25699977 + 11.9 0.000 Intergenic L1MA4|LINE|L1 -3019 NM_015655 26152 Hs.61881 NM_015655 ENSG00000130684 ZNF337 - zinc finger protein 337 protein-coding chr3-6539 chr3 118981810 118982020 + 11.9 0.000 exon (NM_001353318, exon 2 of 8) exon (NM_001353318, exon 2 of 8) 38839 NR_046230 100506765 Hs.660823 NR_046230 ENSG00000239877 IGSF11-AS1 - IGSF11 antisense RNA 1 ncRNA chr1-7680 chr1 19652246 19652456 + 11.9 0.000 intron (NM_001278166, intron 1 of 3) intron (NM_001278166, intron 1 of 3) 4741 NM_001278166 4681 Hs.654502 NM_005380 ENSG00000158747 NBL1 D1S1733E|DAN|DAND1|NB|NO3 NBL1, DAN family BMP antagonist protein-coding chr5-1918 chr5 173764466 173764676 + 11.9 0.000 Intergenic Intergenic -18362 NR_108027 101928136 Hs.449267 NR_108027 ENSG00000253686 LINC01484 - long intergenic non-protein coding RNA 1484 ncRNA chr1-5993 chr1 45221785 45221995 + 11.9 0.000 Intergenic Intergenic -15285 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr2-13518 chr2 151168377 151168587 + 11.9 0.000 Intergenic Intergenic 93381 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr1-6065 chr1 93331496 93331706 + 11.9 0.000 intron (NR_034089, intron 5 of 8) intron (NR_034089, intron 5 of 8) 14210 NR_034089 100131564 Hs.732666 NR_034089 CCDC18-AS1 - CCDC18 antisense RNA 1 ncRNA chr5-3275 chr5 111744008 111744218 + 11.9 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) 12138 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr10-883 chr10 87094758 87094968 + 11.9 0.000 promoter-TSS (NM_019054) promoter-TSS (NM_019054) -20 NM_001318905 2746 Hs.500409 NM_005271 ENSG00000148672 GLUD1 GDH|GDH1|GLUD glutamate dehydrogenase 1 protein-coding chr4-1840 chr4 124423252 124423462 + 11.9 0.000 Intergenic Intergenic 135077 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr5-2656 chr5 10915192 10915402 + 11.9 0.000 Intergenic Intergenic -154063 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr3-1924 chr3 184297225 184297435 + 11.9 0.000 Intergenic Intergenic -1911 NM_002808 5708 Hs.518464 NM_002808 ENSG00000175166 PSMD2 P97|RPN1|S2|TRAP2 proteasome 26S subunit, non-ATPase 2 protein-coding chr15-1140 chr15 56919364 56919574 + 11.9 0.000 promoter-TSS (NR_015419) promoter-TSS (NR_015419) 24 NM_001322164 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr1-4595 chr1 117959409 117959619 + 11.9 0.000 3' UTR (NM_006784, exon 27 of 27) 3' UTR (NM_006784, exon 27 of 27) 29775 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding chr20-812 chr20 44187608 44187818 + 11.9 0.000 promoter-TSS (NM_020433) promoter-TSS (NM_020433) -135 NM_020433 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr16-3050 chr16 55391963 55392173 + 11.9 0.000 Intergenic Intergenic 67509 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr11-2327 chr11 69086094 69086304 + 11.9 0.000 intron (NM_139075, intron 22 of 24) intron (NM_139075, intron 22 of 24) 3023 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr2-2886 chr2 212646963 212647173 + 11.9 0.000 Intergenic Intergenic -108266 NM_005235 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr10-3512 chr10 71244655 71244865 + 11.9 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -26532 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr9-6959 chr9 103980586 103980796 + 11.9 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -19018 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr22-866 chr22 37571796 37572006 + 11.9 0.000 exon (NM_006498, exon 2 of 4) exon (NM_006498, exon 2 of 4) 8186 NM_006498 3957 Hs.531776 NM_006498 ENSG00000100079 LGALS2 HL14 galectin 2 protein-coding chr9-1127 chr9 109499833 109500043 + 11.9 0.000 Intergenic CpG -1631 NM_002829 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chr7-3913 chr7 123196777 123196987 + 11.9 0.000 intron (NM_001324400, intron 1 of 17) MIRb|SINE|MIR 3087 NM_022444 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr17-4753 chr17 42552284 42552494 + 11.9 0.000 promoter-TSS (NM_001330219) promoter-TSS (NM_001330219) -534 NR_144397 3292 Hs.654385 NM_000413 ENSG00000108786 HSD17B1 17-beta-HSD|20-alpha-HSD|E2DH|EDH17B2|EDHB17|HSD17|SDR28C1 hydroxysteroid 17-beta dehydrogenase 1 protein-coding chr18-1205 chr18 32708910 32709120 + 11.9 0.000 intron (NM_020805, intron 3 of 8) L2a|LINE|L2 64008 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chrX-2955 chrX 155116200 155116410 + 11.9 0.000 intron (NM_001018055, intron 8 of 10) intron (NM_001018055, intron 8 of 10) 44885 NM_001018055 79184 Hs.558537 NM_024332 ENSG00000185515 BRCC3 BRCC36|C6.1A|CXorf53 BRCA1/BRCA2-containing complex subunit 3 protein-coding chr1-3048 chr1 7810472 7810682 + 11.9 0.000 exon (NM_001289864, exon 13 of 22) exon (NM_001289864, exon 13 of 22) 26148 NM_001289861 8863 Hs.162200 NM_016831 ENSG00000049246 PER3 FASPS3|GIG13 period circadian regulator 3 protein-coding chr15-1381 chr15 93030651 93030861 + 11.9 0.000 Intergenic Intergenic 42400 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr2-4174 chr2 187206258 187206468 + 11.9 0.000 Intergenic Intergenic 241889 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr2-2766 chr2 223051187 223051397 + 11.9 0.000 promoter-TSS (NM_080671) promoter-TSS (NM_080671) -638 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr8-1635 chr8 102280920 102281130 + 11.9 0.000 intron (NM_001282873, intron 41 of 58) AluJr4|SINE|Alu 41574 NR_125415 101927221 Hs.492445 NR_125415 ENSG00000246263 UBR5-AS1 - UBR5 antisense RNA 1 ncRNA chr1-5641 chr1 24857651 24857861 + 11.9 0.000 Intergenic Intergenic 61660 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr8-1739 chr8 19012565 19012775 + 11.9 0.000 intron (NM_015310, intron 1 of 15) intron (NM_015310, intron 1 of 15) 1033 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr1-6387 chr1 10166237 10166447 + 11.9 0.000 intron (NM_006048, intron 22 of 26) Tigger15a|DNA|TcMar-Tigger -44228 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr13-1459 chr13 75830657 75830867 + 11.9 0.000 intron (NM_005358, intron 14 of 29) L3b|LINE|CR1 -40276 NM_001257995 729420 Hs.586820 NM_001257995 LMO7DN C13orf45 LMO7 downstream neighbor protein-coding chr12-2460 chr12 56570173 56570383 + 11.9 0.000 intron (NM_002898, intron 4 of 13) intron (NM_002898, intron 4 of 13) 48458 NM_002898 5939 Hs.505729 NM_002898 ENSG00000076067 RBMS2 SCR3 RNA binding motif single stranded interacting protein 2 protein-coding chr9-4978 chr9 19209205 19209415 + 11.9 0.000 Intergenic Intergenic -21383 NM_001330640 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr2-4202 chr2 201797626 201797836 + 11.9 0.000 Intergenic Intergenic -8698 NM_139158 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr3-1859 chr3 114900505 114900715 + 11.9 0.000 promoter-TSS (NR_121662) promoter-TSS (NR_121662) 15 NR_121662 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr22-797 chr22 50399669 50399879 + 11.9 0.000 intron (NM_001351648, intron 3 of 22) intron (NM_001351648, intron 3 of 22) -7668 NR_162128 113218480 NR_162128 MIR12114 - microRNA 12114 ncRNA chr9-8451 chr9 122567984 122568194 + 11.9 0.000 exon (NM_001004454, exon 1 of 1) exon (NM_001004454, exon 1 of 1) 388 NM_001004454 138881 Hs.632695 NM_001004454 ENSG00000171496 OR1L8 OR9-24 olfactory receptor family 1 subfamily L member 8 protein-coding chr13-1079 chr13 51162100 51162310 + 11.9 0.000 intron (NR_102431, intron 1 of 4) intron (NR_102431, intron 1 of 4) 10017 NR_102432 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr1-4442 chr1 923684 923894 + 11.9 0.000 Intergenic CpG -1942 NM_152486 148398 Hs.335293 NM_152486 ENSG00000187634 SAMD11 MRS sterile alpha motif domain containing 11 protein-coding chr2-3242 chr2 235199718 235199928 + 11.9 0.000 Intergenic Intergenic 172088 NM_001371306 chr17-2207 chr17 80519917 80520127 + 11.9 0.000 Intergenic Intergenic -24816 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr9-2795 chr9 117892369 117892579 + 11.9 0.000 Intergenic Intergenic 188071 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr5-4843 chr5 62259795 62260005 + 11.9 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -46262 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr12-3443 chr12 112660984 112661194 + 11.9 0.000 intron (NM_001347952, intron 1 of 21) MIRc|SINE|MIR 34087 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chrX-629 chrX 110806088 110806298 + 11.9 0.000 Intergenic Intergenic -10376 NM_001367209 91851 Hs.496587 NM_145234 ENSG00000101938 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin like 1 protein-coding chr18-722 chr18 35019909 35020119 + 11.9 0.000 intron (NM_001143827, intron 2 of 7) intron (NM_001143827, intron 2 of 7) -21399 NM_014268 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr19-2633 chr19 4682569 4682779 + 11.9 0.000 intron (NM_139159, intron 20 of 21) intron (NM_139159, intron 20 of 21) 3392 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr9-3499 chr9 19968971 19969181 + 11.9 0.000 Intergenic Intergenic -182057 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr7-3378 chr7 108094364 108094574 + 11.9 0.000 intron (NM_001318048, intron 12 of 17) intron (NM_001318048, intron 12 of 17) 35892 NM_001318047 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr15-2661 chr15 75997993 75998203 + 11.9 0.000 intron (NM_138573, intron 3 of 5) intron (NM_138573, intron 3 of 5) 14326 NM_138573 145957 Hs.732438 NM_138573 ENSG00000169752 NRG4 HRG4 neuregulin 4 protein-coding chr13-780 chr13 41060214 41060424 + 11.9 0.000 intron (NM_001370329, intron 1 of 9) CpG 1067 NM_001370330 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr3-1372 chr3 48683326 48683536 + 11.9 0.000 intron (NM_016453, intron 1 of 12) intron (NM_016453, intron 1 of 12) 2484 NM_016453 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr9-4597 chr9 98205835 98206045 + 11.9 0.000 intron (NR_051978, intron 8 of 11) intron (NR_051978, intron 8 of 11) 7611 NM_001267572 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr15-2263 chr15 48311957 48312167 + 11.9 0.000 Intergenic Intergenic -19033 NM_001330286 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr1-9705 chr1 52007638 52007848 + 11.9 0.000 Intergenic LTR8|LTR|ERV1 -17043 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr11-5305 chr11 46326947 46327157 + 11.9 0.000 Intergenic Intergenic -5874 NM_201532 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr8-2824 chr8 127772440 127772650 + 11.9 0.000 Intergenic MER45A|DNA|hAT-Tip100 -21988 NR_003367 5820 Hs.133107 NR_003367 ENSG00000249859 PVT1 LINC00079|MIR1204HG|NCRNA00079|onco-lncRNA-100 Pvt1 oncogene ncRNA chr10-5790 chr10 105710460 105710670 + 11.9 0.000 intron (NR_120625, intron 3 of 3) Tigger1|DNA|TcMar-Tigger 109768 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr15-3381 chr15 86942862 86943072 + 11.9 0.000 intron (NR_135683, intron 1 of 2) MLT1J1-int|LTR|ERVL-MaLR 10087 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr1-4814 chr1 21792712 21792922 + 11.9 0.000 Intergenic AluSg|SINE|Alu -9618 NM_001330394 84196 Hs.467524 NM_032236 ENSG00000090686 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding chr22-1041 chr22 38564792 38565002 + 11.9 0.000 intron (NM_001363017, intron 4 of 11) intron (NM_001363017, intron 4 of 11) 3512 NM_001278208 11144 Hs.339396 NM_007068 ENSG00000100206 DMC1 DMC1H|LIM15|dJ199H16.1 DNA meiotic recombinase 1 protein-coding chr22-1888 chr22 44687426 44687636 + 11.9 0.000 intron (NM_001198721, intron 2 of 9) L1MEd|LINE|L1 10446 NM_015366 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr2-4976 chr2 202816094 202816304 + 11.9 0.000 intron (NM_001288623, intron 6 of 12) intron (NM_001288623, intron 6 of 12) 13035 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr16-3609 chr16 81724993 81725203 + 11.9 0.000 Intergenic Intergenic -54193 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr12-2912 chr12 53710678 53710888 + 11.9 0.000 non-coding (NR_026554, exon 14 of 14) non-coding (NR_026554, exon 14 of 14) 16669 NM_001143682 57658 Hs.156667 NM_020898 ENSG00000012822 CALCOCO1 Cocoa|PP13275|calphoglin calcium binding and coiled-coil domain 1 protein-coding chr21-279 chr21 45973901 45974111 + 11.9 0.000 intron (NR_109931, intron 1 of 1) CpG 1036 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr13-1829 chr13 77215500 77215710 + 11.9 0.000 intron (NM_015057, intron 21 of 82) AluJb|SINE|Alu 111489 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr3-3880 chr3 39705406 39705616 + 11.9 0.000 Intergenic Intergenic -103403 NM_001284423 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr11-3717 chr11 14002532 14002742 + 11.9 0.000 intron (NM_006108, intron 2 of 15) intron (NM_006108, intron 2 of 15) 39914 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr3-1873 chr3 126212847 126213057 + 11.9 0.000 Intergenic CpG -31766 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr2-1220 chr2 237475312 237475522 + 11.9 0.000 Intergenic CpG -10993 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr10-2056 chr10 93422187 93422397 + 11.9 0.000 intron (NM_013451, intron 5 of 53) intron (NM_013451, intron 5 of 53) 60042 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr15-2424 chr15 70534009 70534219 + 11.9 0.000 Intergenic MIRb|SINE|MIR -28186 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chrX-1110 chrX 17165799 17166009 + 11.9 0.000 Intergenic Intergenic -209296 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr12-4205 chr12 99988246 99988456 + 11.9 0.000 Intergenic Intergenic -3697 NM_001352186 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr1-8469 chr1 115088373 115088583 + 11.9 0.000 intron (NM_005725, intron 1 of 7) intron (NM_005725, intron 1 of 7) 1022 NM_001308315 10100 Hs.310458 NM_005725 ENSG00000134198 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding chr17-2910 chr17 43341813 43342023 + 11.9 0.000 Intergenic HERVK13-int|LTR|ERVK -41687 NR_002716 6066 NR_002716 ENSG00000274585 RNU2-1 RNU2|U2 RNA, U2 small nuclear 1 snRNA chr6-1953 chr6 129575573 129575783 + 11.9 0.000 TTS (NM_033515) TTS (NM_033515) 134499 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr8-2850 chr8 133209264 133209474 + 11.9 0.000 intron (NM_001204870, intron 1 of 1) intron (NM_001204870, intron 1 of 1) 18330 NM_001204869 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr19-3010 chr19 46829292 46829502 + 11.9 0.000 Intergenic L1MB7|LINE|L1 1307 NR_024258 100170220 Hs.541243 NR_024258 SNAR-E - small NF90 (ILF3) associated RNA E snRNA chr3-2872 chr3 45907974 45908184 + 11.9 0.000 intron (NM_001276379, intron 2 of 9) MLT1H1|LTR|ERVL-MaLR 7645 NM_001276378 54585 Hs.30824 NM_020347 ENSG00000163818 LZTFL1 BBS17 leucine zipper transcription factor like 1 protein-coding chr2-6951 chr2 120067383 120067593 + 11.9 0.000 intron (NM_001330307, intron 3 of 16) intron (NM_001330307, intron 3 of 16) 54411 NM_001184938 57669 Hs.369232 NM_020909 ENSG00000115109 EPB41L5 BE37|YMO1|YRT erythrocyte membrane protein band 4.1 like 5 protein-coding chr8-3543 chr8 122312746 122312956 + 11.9 0.000 Intergenic Intergenic 255793 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr12-1356 chr12 28611026 28611236 + 11.9 0.000 Intergenic Intergenic -420393 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr3-9323 chr3 45118386 45118596 + 11.9 0.000 exon (NM_022842, exon 2 of 9) exon (NM_022842, exon 2 of 9) 27887 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr8-1696 chr8 91040240 91040450 + 11.9 0.000 intron (NM_018710, intron 1 of 6) intron (NM_018710, intron 1 of 6) 514 NM_018710 55529 Hs.202517 NM_018710 ENSG00000155099 PIP4P2 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 protein-coding chr1-6380 chr1 9385768 9385978 + 11.9 0.000 Intergenic Intergenic 43043 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr17-2082 chr17 79075543 79075753 + 11.9 0.000 intron (NM_001042573, intron 1 of 13) intron (NM_001042573, intron 1 of 13) 711 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr17-3489 chr17 48078019 48078229 + 11.9 0.000 intron (NM_001127228, intron 1 of 4) intron (NM_001127228, intron 1 of 4) 23062 NM_006807 10951 Hs.77254 NM_006807 ENSG00000108468 CBX1 CBX|HP1-BETA|HP1Hs-beta|HP1Hsbeta|M31|MOD1|p25beta chromobox 1 protein-coding chr7-1661 chr7 84194944 84195154 + 11.9 0.000 promoter-TSS (NM_006080) promoter-TSS (NM_006080) -260 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr17-4801 chr17 49912752 49912962 + 11.9 0.000 Intergenic Intergenic -56333 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr1-4036 chr1 201056960 201057170 + 11.9 0.000 intron (NM_000069, intron 28 of 43) L2a|LINE|L2 -33351 NM_001252100 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr10-3101 chr10 24458006 24458216 + 11.9 0.000 intron (NM_001321681, intron 1 of 13) intron (NM_001321681, intron 1 of 13) -8420 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr2-5898 chr2 241489218 241489428 + 11.9 0.000 intron (NM_014808, intron 21 of 26) L1MC|LINE|L1 11418 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr17-5223 chr17 17107274 17107484 + 11.9 0.000 intron (NM_201274, intron 3 of 23) intron (NM_201274, intron 3 of 23) 64619 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr10-4160 chr10 88768222 88768432 + 11.9 0.000 intron (NM_001102469, intron 4 of 8) intron (NM_001102469, intron 4 of 8) 6921 NM_001102469 643418 Hs.632091 NM_001102469 ENSG00000204020 LIPN ARCI8|LI4|LIPL4|bA186O14.3 lipase family member N protein-coding chr2-5029 chr2 232407678 232407888 + 11.9 0.000 intron (NM_031313, intron 4 of 10) CpG 939 NM_031313 251 Hs.333509 NM_031313 ENSG00000163286 ALPG ALPPL|ALPPL2|GCAP alkaline phosphatase, germ cell protein-coding chr7-3919 chr7 127652824 127653034 + 11.9 0.000 intron (NM_014390, intron 1 of 23) intron (NM_014390, intron 1 of 23) 735 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr8-1275 chr8 17467072 17467282 + 11.9 0.000 Intergenic Intergenic -29911 NM_001370338 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr17-4519 chr17 75597874 75598084 + 11.9 0.000 intron (NM_001309242, intron 13 of 62) L2b|LINE|L2 9921 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr7-1998 chr7 13628675 13628885 + 11.9 0.000 Intergenic ERVL-B4-int|LTR|ERVL 357734 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr4-1985 chr4 577606 577816 + 11.9 0.000 non-coding (NR_148199, exon 1 of 3) non-coding (NR_148199, exon 1 of 3) 543 NR_148199 105374338 Hs.518426 NR_148199 ENSG00000283183 LOC105374338 - uncharacterized LOC105374338 ncRNA chr14-1285 chr14 94868075 94868285 + 11.9 0.000 Intergenic Intergenic 97538 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr8-1801 chr8 101902904 101903114 + 11.9 0.000 intron (NM_001040624, intron 4 of 7) intron (NM_001040624, intron 4 of 7) -81423 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr16-3336 chr16 3334965 3335175 + 11.9 0.000 Intergenic AluSq2|SINE|Alu -20819 NM_012368 4993 Hs.258574 NM_012368 ENSG00000168158 OR2C1 OLFmf3|OR2C2P olfactory receptor family 2 subfamily C member 1 protein-coding chr18-955 chr18 25594443 25594653 + 11.9 0.000 Intergenic Intergenic -242382 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr15-943 chr15 90883534 90883744 + 11.9 0.000 promoter-TSS (NM_001143785) promoter-TSS (NM_001143785) -865 NM_002005 2242 Hs.7636 NM_002005 ENSG00000182511 FES FPS FES proto-oncogene, tyrosine kinase protein-coding chr7-3779 chr7 84047079 84047289 + 11.9 0.000 intron (NM_006080, intron 5 of 16) intron (NM_006080, intron 5 of 16) 147605 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr10-1564 chr10 132438229 132438439 + 11.9 0.000 Intergenic Intergenic -6855 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr7-5482 chr7 42144239 42144449 + 11.9 0.000 intron (NM_000168, intron 3 of 14) intron (NM_000168, intron 3 of 14) 92865 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr4-3493 chr4 138051547 138051757 + 11.9 0.000 intron (NR_037866, intron 7 of 10) intron (NR_037866, intron 7 of 10) -37362 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr11-2992 chr11 117011348 117011558 + 11.9 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 86975 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr7-3638 chr7 42739650 42739860 + 11.9 0.000 Intergenic LTR16C|LTR|ERVL -33308 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr3-3460 chr3 161171212 161171422 + 11.9 0.000 Intergenic Intergenic -49973 NM_015938 51068 Hs.598836 NM_015938 ENSG00000169251 NMD3 CGI-07 NMD3 ribosome export adaptor protein-coding chr2-5321 chr2 75130243 75130453 + 11.9 0.000 intron (NM_015727, intron 1 of 3) BLACKJACK|DNA|hAT-Blackjack 39536 NR_049796 100846995 NR_049796 ENSG00000263909 MIR5000 - microRNA 5000 ncRNA chr2-6741 chr2 36400897 36401107 + 11.9 0.000 intron (NM_016441, intron 2 of 16) intron (NM_016441, intron 2 of 16) 45224 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr11-2544 chr11 86559427 86559637 + 11.9 0.000 intron (NM_001014811, intron 2 of 13) intron (NM_001014811, intron 2 of 13) 112666 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr11-4489 chr11 111409346 111409556 + 11.9 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 8735 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr18-1306 chr18 68479926 68480136 + 11.9 0.000 Intergenic Intergenic 235077 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr8-882 chr8 23373074 23373284 + 11.9 0.000 intron (NM_002318, intron 1 of 13) L2c|LINE|L2 30941 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr1-2035 chr1 201086047 201086257 + 11.9 0.000 intron (NM_000069, intron 7 of 43) intron (NM_000069, intron 7 of 43) 26274 NM_000069 779 Hs.1294 NM_000069 ENSG00000081248 CACNA1S CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP calcium voltage-gated channel subunit alpha1 S protein-coding chr9-2012 chr9 134153213 134153423 + 11.9 0.000 intron (NM_052821, intron 8 of 12) MIR|SINE|MIR 11246 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr3-2499 chr3 184129101 184129311 + 11.9 0.000 Intergenic Intergenic -6152 NM_003907 8893 Hs.283551 NM_003907 ENSG00000145191 EIF2B5 CACH|CLE|EIF-2B|EIF2Bepsilon|LVWM eukaryotic translation initiation factor 2B subunit epsilon protein-coding chr7-4445 chr7 127406602 127406812 + 11.9 0.000 Intergenic L3|LINE|CR1 -13999 NM_176814 168850 Hs.159006 NM_176814 ENSG00000048405 ZNF800 - zinc finger protein 800 protein-coding chr8-3389 chr8 60843717 60843927 + 11.9 0.000 intron (NM_017780, intron 21 of 37) intron (NM_017780, intron 21 of 37) 102563 NM_001316690 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr1-6020 chr1 60335036 60335246 + 11.9 0.000 Intergenic Intergenic -261371 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr14-2181 chr14 98470434 98470644 + 11.9 0.000 Intergenic Intergenic -241074 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr2-3384 chr2 20573933 20574143 + 11.9 0.000 Intergenic Intergenic 18510 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr4-1794 chr4 8534364 8534574 + 11.9 0.000 Intergenic MER4D|LTR|ERV1 -45768 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr3-1783 chr3 16517164 16517374 + 11.9 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -3570 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr1-7649 chr1 7857930 7858140 + 11.9 0.000 Intergenic Intergenic -4544 NM_021995 10911 Hs.715862 NM_006786 ENSG00000049247 UTS2 PRO1068|U-II|UCN2|UII urotensin 2 protein-coding chr19-3262 chr19 2215350 2215560 + 11.9 0.000 intron (NM_032482, intron 19 of 27) intron (NM_032482, intron 19 of 27) 18694 NR_031596 100302283 NR_031596 ENSG00000221411 MIR1227 MIRN1227|hsa-mir-1227|mir-1227 microRNA 1227 ncRNA chr3-1412 chr3 155871521 155871731 + 11.9 0.000 intron (NM_003875, intron 1 of 15) CpG 976 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr5-3164 chr5 72149758 72149968 + 11.9 0.000 intron (NM_005909, intron 2 of 6) intron (NM_005909, intron 2 of 6) -19604 NR_039967 100616377 NR_039967 ENSG00000264099 MIR4803 - microRNA 4803 ncRNA chr7-2147 chr7 44386055 44386265 + 11.9 0.000 intron (NM_015332, intron 5 of 5) intron (NM_015332, intron 5 of 5) -60529 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr17-1745 chr17 1960340 1960550 + 11.9 0.000 intron (NM_178568, intron 1 of 1) L2a|LINE|L2 -57271 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr5-1851 chr5 131003777 131003987 + 11.9 0.000 Intergenic L1MA3|LINE|L1 161374 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr4-6111 chr4 16893259 16893469 + 11.9 0.000 intron (NR_130734, intron 1 of 6) intron (NR_130734, intron 1 of 6) 5281 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr9-1938 chr9 21481451 21481661 + 11.8 0.000 exon (NM_176891, exon 1 of 1) exon (NM_176891, exon 1 of 1) 757 NM_176891 338376 Hs.682604 NM_176891 ENSG00000184995 IFNE IFN-E|IFNE1|IFNT1|INFE1|PRO655 interferon epsilon protein-coding chr7-1939 chr7 48139588 48139798 + 11.8 0.000 Intergenic MER51-int|LTR|ERV1 -31765 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr6-5165 chr6 127288838 127289048 + 11.8 0.000 TTS (NM_001242849) TTS (NM_001242849) 22105 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr5-2126 chr5 77972426 77972636 + 11.8 0.000 Intergenic CpG 14284 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr2-3542 chr2 11584135 11584345 + 11.8 0.000 intron (NM_014668, intron 7 of 32) intron (NM_014668, intron 7 of 32) 41554 NM_033090 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr7-3122 chr7 44665660 44665870 + 11.8 0.000 intron (NM_001363523, intron 5 of 23) intron (NM_001363523, intron 5 of 23) 59138 NM_001003941 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr10-1824 chr10 1422785 1422995 + 11.8 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -103740 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr21-179 chr21 17463470 17463680 + 11.8 0.000 Intergenic L2c|LINE|L2 24685 NR_037586 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chr16-2143 chr16 30651871 30652081 + 11.8 0.000 intron (NM_024031, intron 3 of 11) intron (NM_024031, intron 3 of 11) 1016 NM_024031 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 - proline rich 14 protein-coding chr7-2144 chr7 44201444 44201654 + 11.8 0.000 intron (NM_006555, intron 1 of 6) intron (NM_006555, intron 1 of 6) 571 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr7-4996 chr7 158955087 158955297 + 11.8 0.000 Intergenic Intergenic -53162 NR_024394 154822 Hs.544783 NM_198345 ENSG00000231419 LINC00689 - long intergenic non-protein coding RNA 689 ncRNA chr1-8424 chr1 90246225 90246435 + 11.8 0.000 Intergenic Intergenic 251220 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr3-10823 chr3 163423297 163423507 + 11.8 0.000 Intergenic MLT2A1|LTR|ERVL -120101 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr18-2583 chr18 12057709 12057919 + 11.8 0.000 Intergenic Intergenic -36029 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr7-3421 chr7 147423438 147423648 + 11.8 0.000 intron (NM_014141, intron 9 of 22) L2b|LINE|L2 -45422 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr14-1512 chr14 52602335 52602545 + 11.8 0.000 intron (NM_001099652, intron 3 of 6) (TTCTGTC)n|Simple_repeat|Simple_repeat 49604 NM_001099652 283554 Hs.416214 NM_001099652 ENSG00000180998 GPR137C TM7SF1L2 G protein-coupled receptor 137C protein-coding chr5-7418 chr5 27847327 27847537 + 11.8 0.000 Intergenic L1MEd|LINE|L1 375140 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr22-982 chr22 30196144 30196354 + 11.8 0.000 Intergenic Intergenic -42945 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr8-1671 chr8 38557545 38557755 + 11.8 0.000 Intergenic Intergenic -28988 NM_001303531 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr14-4544 chr14 42994207 42994417 + 11.8 0.000 Intergenic ERVL-B4-int|LTR|ERVL 1387456 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr5-5296 chr5 125814222 125814432 + 11.8 0.000 Intergenic OldhAT1|DNA|hAT-Ac 321066 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr14-2212 chr14 102764711 102764921 + 11.8 0.000 Intergenic Intergenic -12633 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr3-4075 chr3 99659077 99659287 + 11.8 0.000 intron (NM_020351, intron 1 of 3) intron (NM_020351, intron 1 of 3) 20588 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr1-5815 chr1 209169575 209169785 + 11.8 0.000 Intergenic Intergenic -155776 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr15-2704 chr15 88509647 88509857 + 11.8 0.000 intron (NR_135742, intron 6 of 6) MLT1J2|LTR|ERVL-MaLR 36623 NR_135744 55070 Hs.655064 NM_017996 ENSG00000140543 DET1 - DET1 partner of COP1 E3 ubiquitin ligase protein-coding chr11-2297 chr11 46800269 46800479 + 11.8 0.000 intron (NM_001008938, intron 9 of 43) intron (NM_001008938, intron 9 of 43) -37875 NR_003056 692108 Hs.693252 NR_003056 ENSG00000212135 SNORD67 HBII-166 small nucleolar RNA, C/D box 67 snoRNA chr10-4741 chr10 1538729 1538939 + 11.8 0.000 intron (NR_033387, intron 1 of 1) intron (NR_033387, intron 1 of 1) -7926 NR_152792 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr5-4799 chr5 57447789 57447999 + 11.8 0.000 Intergenic Intergenic 34917 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr1-4851 chr1 28374378 28374588 + 11.8 0.000 intron (NM_001048183, intron 1 of 13) intron (NM_001048183, intron 1 of 13) 4743 NM_001350161 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr19-3860 chr19 18879322 18879532 + 11.8 0.000 intron (NM_021267, intron 4 of 7) intron (NM_021267, intron 4 of 7) 16731 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr6-4771 chr6 73804767 73804977 + 11.8 0.000 intron (NM_001159588, intron 23 of 31) MIR3|SINE|MIR 108669 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr5-5594 chr5 150610476 150610686 + 11.8 0.000 intron (NM_001166208, intron 1 of 2) MIRb|SINE|MIR -7063 NM_001166209 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr4-2995 chr4 121217410 121217620 + 11.8 0.000 promoter-TSS (NM_001128843) promoter-TSS (NM_001128843) -888 NM_001128843 79931 Hs.208206 NM_024873 ENSG00000050730 TNIP3 ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding chr1-9766 chr1 55062080 55062290 + 11.8 0.000 intron (NM_174936, intron 11 of 11) intron (NM_174936, intron 11 of 11) 21963 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr1-7879 chr1 111690357 111690567 + 11.8 0.000 intron (NM_001370217, intron 1 of 7) intron (NM_001370217, intron 1 of 7) 25668 NM_001370217 5906 Hs.190334 NM_002884 ENSG00000116473 RAP1A C21KG|G-22K|KREV-1|KREV1|RAP1|SMGP21 RAP1A, member of RAS oncogene family protein-coding chr4-4703 chr4 87891570 87891780 + 11.8 0.000 Intergenic L1PA8A|LINE|L1 56972 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr11-3731 chr11 26692964 26693174 + 11.8 0.000 intron (NM_178498, intron 8 of 14) intron (NM_178498, intron 8 of 14) 28991 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr6-5328 chr6 144341049 144341259 + 11.8 0.000 intron (NM_007124, intron 1 of 73) intron (NM_007124, intron 1 of 73) 49417 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr17-2243 chr17 7851933 7852143 + 11.8 0.000 exon (NM_001348716, exon 18 of 23) exon (NM_001348716, exon 18 of 23) -3028 NM_001319941 92162 Hs.389669 NM_203411 ENSG00000167874 TMEM88 - transmembrane protein 88 protein-coding chr20-2339 chr20 11748566 11748776 + 11.8 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 122044 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr12-2572 chr12 112267561 112267771 + 11.8 0.000 intron (NM_001109662, intron 13 of 75) intron (NM_001109662, intron 13 of 75) -104345 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr13-2185 chr13 19533645 19533855 + 11.8 0.000 intron (NM_001141968, intron 1 of 18) MIRc|SINE|MIR 3013 NM_199254 93492 Hs.377488 NM_130785 ENSG00000132958 TPTE2 TPIP transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 protein-coding chr2-11380 chr2 212761521 212761731 + 11.8 0.000 Intergenic L1PA7|LINE|L1 -33705 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr4-1901 chr4 24103680 24103890 + 11.8 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) -213738 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr17-6817 chr17 9672456 9672666 + 11.8 0.000 intron (NM_001267576, intron 3 of 14) intron (NM_001267576, intron 3 of 14) 27024 NM_001267576 124739 Hs.709621 NM_153210 ENSG00000154914 USP43 - ubiquitin specific peptidase 43 protein-coding chr21-451 chr21 45258163 45258373 + 11.8 0.000 intron (NR_135279, intron 2 of 2) intron (NR_135279, intron 2 of 2) 23928 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr3-4295 chr3 158074929 158075139 + 11.8 0.000 Intergenic Intergenic 31129 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr5-6647 chr5 51995980 51996190 + 11.8 0.000 Intergenic L2|LINE|L2 -11946 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr2-5377 chr2 98801031 98801241 + 11.8 0.000 intron (NM_207362, intron 7 of 9) intron (NM_207362, intron 7 of 9) -29238 NR_126337 101927070 Hs.469395 NR_126337 LINC02611 - long intergenic non-protein coding RNA 2611 ncRNA chr4-1179 chr4 7905125 7905335 + 11.8 0.000 intron (NM_001371091, intron 1 of 17) intron (NM_001371091, intron 1 of 17) -32922 NM_001371090 chr12-2872 chr12 15685058 15685268 + 11.8 0.000 intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 104225 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr12-2385 chr12 26939535 26939745 + 11.8 0.000 intron (NM_015633, intron 1 of 6) L2c|LINE|L2 1170 NM_015633 26127 Hs.591162 NM_015633 ENSG00000111790 FGFR1OP2 HSPC123-like|WIT3.0 FGFR1 oncogene partner 2 protein-coding chr16-5327 chr16 78223217 78223427 + 11.8 0.000 intron (NM_001291997, intron 4 of 7) MER20|DNA|hAT-Charlie 123668 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr9-7295 chr9 8953689 8953899 + 11.8 0.000 intron (NM_002839, intron 11 of 45) L1PA16|LINE|L1 95776 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr2-4273 chr2 230824643 230824853 + 11.8 0.000 Intergenic Intergenic -39437 NM_001287241 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr6-2913 chr6 16290422 16290632 + 11.8 0.000 exon (NM_006877, exon 8 of 9) exon (NM_006877, exon 8 of 9) 51940 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr16-2756 chr16 2796324 2796534 + 11.8 0.000 TTS (NR_145775) TTS (NR_145775) 103 NR_145775 109616997 NR_145775 ENSG00000221719 SNORA3C - small nucleolar RNA, H/ACA box 3C snoRNA chr5-1383 chr5 109689331 109689541 + 11.8 0.000 promoter-TSS (NM_002372) promoter-TSS (NM_002372) 70 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr2-5554 chr2 165357873 165358083 + 11.8 0.000 intron (NM_001040143, intron 18 of 27) intron (NM_001040143, intron 18 of 27) 63923 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr4-6591 chr4 696612 696822 + 11.8 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -7566 NM_001294341 84179 Hs.567612 NM_032219 ENSG00000169026 SLC49A3 LP2561|MFSD7 solute carrier family 49 member 3 protein-coding chr7-4992 chr7 157139537 157139747 + 11.8 0.000 intron (NM_014671, intron 1 of 22) CpG 716 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr3-5533 chr3 1153212 1153422 + 11.8 0.000 intron (NM_001289080, intron 2 of 22) intron (NM_001289080, intron 2 of 22) 60293 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr14-4192 chr14 89029039 89029249 + 11.8 0.000 Intergenic Intergenic 204493 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chrX-2610 chrX 107359685 107359895 + 11.8 0.000 Intergenic Intergenic 153158 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr19-4746 chr19 28737279 28737489 + 11.8 0.000 Intergenic Intergenic -9690 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr2-2691 chr2 21821631 21821841 + 11.8 0.000 Intergenic Intergenic -111084 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr2-1717 chr2 218186425 218186635 + 11.8 0.000 Intergenic Intergenic -19568 NM_000634 3577 Hs.194778 NM_000634 ENSG00000163464 CXCR1 C-C|C-C-CKR-1|CD128|CD181|CDw128a|CKR-1|CMKAR1|IL8R1|IL8RA|IL8RBA C-X-C motif chemokine receptor 1 protein-coding chr1-4211 chr1 116316863 116317073 + 11.8 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -56276 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr11-2190 chr11 12494828 12495038 + 11.8 0.000 intron (NM_018222, intron 4 of 12) intron (NM_018222, intron 4 of 12) 117362 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr11-1513 chr11 76235155 76235365 + 11.8 0.000 Intergenic Intergenic -28758 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr21-159 chr21 44801670 44801880 + 11.8 0.000 promoter-TSS (NM_001202489) promoter-TSS (NM_001202489) 45 NM_001202489 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding chr14-1938 chr14 23245331 23245541 + 11.8 0.000 intron (NM_001370218, intron 5 of 15) intron (NM_001370218, intron 5 of 15) 7500 NM_001282322 100507650 NM_001282322 ENSG00000215277 RNF212B C14orf164 ring finger protein 212B protein-coding chr2-6077 chr2 160182616 160182826 + 11.8 0.000 intron (NM_001282390, intron 3 of 13) L1PA7|LINE|L1 17551 NM_001282355 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr1-6975 chr1 161885120 161885330 + 11.8 0.000 intron (NM_007348, intron 14 of 15) intron (NM_007348, intron 14 of 15) 118905 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chr9-2641 chr9 27111360 27111570 + 11.8 0.000 intron (NM_001290078, intron 1 of 20) intron (NM_001290078, intron 1 of 20) 2324 NM_001290077 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr1-15155 chr1 106603517 106603727 + 11.8 0.000 Intergenic Intergenic -214617 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr1-4564 chr1 84504799 84505009 + 11.8 0.000 intron (NM_005274, intron 2 of 3) intron (NM_005274, intron 2 of 3) -1482 NM_001310156 100505741 Hs.584956 NM_022354 ENSG00000122432 SPATA1 SP-2|SPAP1 spermatogenesis associated 1 protein-coding chr7-1616 chr7 5389896 5390106 + 11.8 0.000 intron (NM_001080495, intron 4 of 29) intron (NM_001080495, intron 4 of 29) 33545 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr18-910 chr18 58619190 58619400 + 11.8 0.000 intron (NM_052947, intron 1 of 12) MIRb|SINE|MIR 9796 NM_052947 115701 Hs.628152 NM_052947 ENSG00000198796 ALPK2 HAK alpha kinase 2 protein-coding chr4-3808 chr4 111994305 111994515 + 11.8 0.000 Intergenic Intergenic -151044 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr9-8001 chr9 93945966 93946176 + 11.8 0.000 Intergenic CpG 9284 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr10-2576 chr10 71565545 71565755 + 11.8 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -53730 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr5-2258 chr5 17940245 17940455 + 11.8 0.000 Intergenic Intergenic 133076 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr12-5168 chr12 103431996 103432206 + 11.8 0.000 intron (NR_103526, intron 2 of 10) MER50|LTR|ERV1 63867 NM_001278419 374470 Hs.534649 NM_198521 ENSG00000179088 C12orf42 - chromosome 12 open reading frame 42 protein-coding chr12-4529 chr12 25308785 25308995 + 11.8 0.000 Intergenic HERVL-int|LTR|ERVL -57961 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr2-5727 chr2 216859098 216859308 + 11.8 0.000 TTS (NM_003284) TTS (NM_003284) 861 NM_003284 7141 Hs.3017 NM_003284 ENSG00000118245 TNP1 TP1 transition protein 1 protein-coding chr1-1414 chr1 11664465 11664675 + 11.8 0.000 intron (NM_018438, intron 1 of 5) CpG 370 NM_018438 26270 Hs.464419 NM_018438 ENSG00000116663 FBXO6 FBG2|FBS2|FBX6|Fbx6b F-box protein 6 protein-coding chr4-4722 chr4 89832363 89832573 + 11.8 0.000 intron (NM_001146054, intron 2 of 5) intron (NM_001146054, intron 2 of 5) -3933 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr6-3243 chr6 145099695 145099905 + 11.8 0.000 Intergenic L2c|LINE|L2 587077 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr6-1712 chr6 27865330 27865540 + 11.8 0.000 exon (NM_003511, exon 1 of 1) exon (NM_003511, exon 1 of 1) 106 NM_003511 8332 Hs.233568 NM_003511 ENSG00000276903 HIST1H2AL H2A.i|H2A/i|H2AFI|dJ193B12.9 histone cluster 1 H2A family member l protein-coding chr5-4348 chr5 167770578 167770788 + 11.8 0.000 intron (NM_001080428, intron 1 of 24) intron (NM_001080428, intron 1 of 24) 15754 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chrX-5355 chrX 149304056 149304266 + 11.8 0.000 Intergenic Intergenic 201145 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chrX-878 chrX 154122257 154122467 + 11.8 0.000 Intergenic Intergenic -21881 NM_020061 5956 Hs.247787 NM_020061 ENSG00000102076 OPN1LW CBBM|CBP|COD5|RCP|ROP opsin 1, long wave sensitive protein-coding chr15-956 chr15 41024265 41024475 + 11.8 0.000 intron (NM_017553, intron 25 of 35) intron (NM_017553, intron 25 of 35) 70899 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr10-819 chr10 93993844 93994054 + 11.8 0.000 promoter-TSS (NM_016341) promoter-TSS (NM_016341) 18 NM_001288989 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chrX-2660 chrX 114715147 114715357 + 11.8 0.000 promoter-TSS (NR_031578) promoter-TSS (NR_031578) 19 NR_031578 100302153 NR_031578 ENSG00000221710 MIR1298 MIRN1298|hsa-mir-1298 microRNA 1298 ncRNA chr7-5795 chr7 79980923 79981133 + 11.8 0.000 Intergenic Intergenic -153803 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr2-7549 chr2 23590181 23590391 + 11.8 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 205107 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr5-5482 chr5 139923835 139924045 + 11.8 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 119359 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr3-1294 chr3 127523796 127524006 + 11.8 0.000 intron (NR_125397, intron 5 of 6) L1ME4a|LINE|L1 13879 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr8-1556 chr8 119723002 119723212 + 11.8 0.000 Intergenic Intergenic -49717 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr1-8304 chr1 45128416 45128626 + 11.8 0.000 intron (NM_020883, intron 1 of 13) L1MD1|LINE|L1 78084 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr16-1709 chr16 20027846 20028056 + 11.8 0.000 Intergenic L1MA7|LINE|L1 45827 NM_001002911 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr16-2233 chr16 88966552 88966762 + 11.8 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 10550 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr3-2571 chr3 112582197 112582407 + 11.8 0.000 intron (NM_001348908, intron 4 of 4) intron (NM_001348908, intron 4 of 4) 19667 NR_109779 100506621 Hs.86538 NR_109779 LINC01279 - long intergenic non-protein coding RNA 1279 ncRNA chr20-1013 chr20 4705144 4705354 + 11.8 0.000 Intergenic Intergenic -16660 NM_012409 23627 Hs.406696 NM_012409 ENSG00000171864 PRND DOPPEL|DPL|PrPLP|dJ1068H6.4 prion like protein doppel protein-coding chrX-2743 chrX 127795121 127795331 + 11.8 0.000 Intergenic Intergenic 257177 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr8-1056 chr8 23528581 23528791 + 11.8 0.000 promoter-TSS (NM_001317813) promoter-TSS (NM_001317813) -270 NM_001317812 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr3-6184 chr3 60396139 60396349 + 11.8 0.000 intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) 221626 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr11-3881 chr11 94747403 94747613 + 11.8 0.000 Intergenic Intergenic -7153 NR_135093 105369438 Hs.568921 NR_135093 ENSG00000255929 LOC105369438 - uncharacterized LOC105369438 ncRNA chr19-4818 chr19 35583954 35584164 + 11.8 0.000 Intergenic L2|LINE|L2 -13836 NR_110750 102723617 Hs.579904 NR_110750 ENSG00000224910 LINC01766 - long intergenic non-protein coding RNA 1766 ncRNA chr7-5205 chr7 11993434 11993644 + 11.8 0.000 Intergenic Intergenic -161341 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr14-1329 chr14 72908037 72908247 + 11.8 0.000 Intergenic Intergenic -14026 NM_001280543 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr17-1720 chr17 66302221 66302431 + 11.8 0.000 promoter-TSS (NM_002737) promoter-TSS (NM_002737) -287 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr7-5993 chr7 103046503 103046713 + 11.8 0.000 intron (NM_001111038, intron 2 of 18) MER57-int|LTR|ERV1 27960 NM_145032 222235 Hs.660029 NM_145032 ENSG00000161040 FBXL13 DRC6|Fbl13 F-box and leucine rich repeat protein 13 protein-coding chr3-4866 chr3 165867177 165867387 + 11.8 0.000 Intergenic Intergenic -29859 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr12-1413 chr12 30908681 30908891 + 11.8 0.000 Intergenic Intergenic -17962 NM_001370302 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr8-1307 chr8 101958956 101959166 + 11.8 0.000 intron (NM_001040624, intron 3 of 7) L1MC4|LINE|L1 -25371 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr16-3062 chr16 57649131 57649341 + 11.8 0.000 intron (NM_001370454, intron 2 of 13) intron (NM_001370454, intron 2 of 13) 9744 NM_001145774 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr18-1932 chr18 34945062 34945272 + 11.8 0.000 Intergenic Intergenic -31761 NM_001143826 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr17-2999 chr17 74347884 74348094 + 11.8 0.000 intron (NM_153209, intron 9 of 19) intron (NM_153209, intron 9 of 19) 13879 NM_001080466 388419 NM_001080466 ENSG00000204347 BTBD17 BTBD17A|LGALS3BPL|TANGO10A BTB domain containing 17 protein-coding chr7-2681 chr7 17321009 17321219 + 11.8 0.000 intron (NM_001621, intron 2 of 10) intron (NM_001621, intron 2 of 10) 22462 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr10-4020 chr10 6766051 6766261 + 11.8 0.000 Intergenic Intergenic 13024 NR_108074 100652997 Hs.255086 NR_108074 ENSG00000281186 LINC00706 - long intergenic non-protein coding RNA 706 ncRNA chr4-4547 chr4 72041215 72041425 + 11.8 0.000 intron (NM_053036, intron 1 of 3) L1PA16|LINE|L1 2188 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr18-1862 chr18 25219956 25220166 + 11.8 0.000 intron (NM_001308225, intron 3 of 6) intron (NM_001308225, intron 3 of 6) 132105 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr14-3261 chr14 77886177 77886387 + 11.8 0.000 intron (NM_001366489, intron 4 of 9) intron (NM_001366489, intron 4 of 9) 86173 NM_001366488 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr1-6037 chr1 73160902 73161112 + 11.8 0.000 Intergenic Intergenic -145163 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chr9-4006 chr9 34603654 34603864 + 11.8 0.000 Intergenic Intergenic 8338 NM_148178 138716 Hs.15961 NM_148178 ENSG00000164967 RPP25L C9orf23|bA296L22.5 ribonuclease P/MRP subunit p25 like protein-coding chr19-2373 chr19 3196129 3196339 + 11.8 0.000 exon (NM_001321463, exon 4 of 15) exon (NM_001321463, exon 4 of 15) 10304 NM_001321463 56926 Hs.657032 NM_020170 ENSG00000125912 NCLN NET59 nicalin protein-coding chr7-2697 chr7 24568766 24568976 + 11.8 0.000 Intergenic Intergenic -4581 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr3-5545 chr3 2663395 2663605 + 11.8 0.000 intron (NM_175607, intron 4 of 24) intron (NM_175607, intron 4 of 24) -228715 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr11-5272 chr11 34977276 34977486 + 11.8 0.000 intron (NM_003477, intron 7 of 10) intron (NM_003477, intron 7 of 10) 35544 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr13-4449 chr13 112622056 112622266 + 11.8 0.000 Intergenic Intergenic -24883 NM_207440 400165 Hs.591213 NM_207440 ATP11AUN C13orf35|SMABLO1 ATP11A upstream neighbor protein-coding chr2-9161 chr2 212137301 212137511 + 11.8 0.000 intron (NM_001042599, intron 1 of 26) L1PA13|LINE|L1 288954 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr6-2166 chr6 22236711 22236921 + 11.8 0.000 Intergenic MamRTE1|LINE|RTE-BovB 60220 NM_000948 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr1-6839 chr1 100463701 100463911 + 11.8 0.000 intron (NM_001319212, intron 8 of 13) intron (NM_001319212, intron 8 of 13) -74333 NM_022049 54112 Hs.170053 NM_022049 ENSG00000181656 GPR88 COCPMR|STRG G protein-coupled receptor 88 protein-coding chr14-4978 chr14 75500677 75500887 + 11.8 0.000 Intergenic HAL1ME|LINE|L1 -21687 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr18-348 chr18 2656429 2656639 + 11.8 0.000 intron (NM_015295, intron 1 of 47) CpG 647 NM_015295 23347 Hs.8118 NM_015295 ENSG00000101596 SMCHD1 BAMS|FSHD2 structural maintenance of chromosomes flexible hinge domain containing 1 protein-coding chr7-2113 chr7 18086543 18086753 + 11.8 0.000 promoter-TSS (NM_001321871) promoter-TSS (NM_001321871) -177 NM_001321872 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr2-3958 chr2 68237376 68237586 + 11.8 0.000 intron (NM_000945, intron 1 of 5) MamRTE1|LINE|RTE-BovB 15051 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr12-5340 chr12 116112332 116112542 + 11.8 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) 36217 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr8-1376 chr8 144244540 144244750 + 11.8 0.000 intron (NM_001288814, intron 26 of 41) intron (NM_001288814, intron 26 of 41) 18092 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr10-2808 chr10 751990 752200 + 11.8 0.000 Intergenic Intergenic -62427 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr6-6864 chr6 10272641 10272851 + 11.8 0.000 Intergenic L2|LINE|L2 -131756 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr12-4823 chr12 57096232 57096442 + 11.8 0.000 TTS (NM_001330305) TTS (NM_001330305) 7223 NM_005967 4665 Hs.159223 NM_005967 ENSG00000166886 NAB2 MADER NGFI-A binding protein 2 protein-coding chr1-7636 chr1 4175648 4175858 + 11.8 0.000 Intergenic Intergenic -226773 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr9-4480 chr9 34532003 34532213 + 11.8 0.000 Intergenic L1PA5|LINE|L1 -9118 NM_198573 375704 Hs.522085 NM_198573 ENSG00000168913 ENHO C9orf165|UNQ470 energy homeostasis associated protein-coding chr11-6582 chr11 72422537 72422747 + 11.8 0.000 intron (NM_001258394, intron 2 of 17) intron (NM_001258394, intron 2 of 17) 11889 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr22-1235 chr22 45543515 45543725 + 11.8 0.000 intron (NM_006487, intron 11 of 14) intron (NM_006487, intron 11 of 14) 40737 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr11-3369 chr11 124818145 124818355 + 11.8 0.000 intron (NR_103862, intron 4 of 4) intron (NR_103862, intron 4 of 4) 17822 NR_103862 100507283 Hs.564177 NR_103862 ENSG00000245498 LOC100507283 - uncharacterized LOC100507283 ncRNA chr10-5550 chr10 87309969 87310179 + 11.8 0.000 intron (NR_024397, intron 3 of 5) L1MC5a|LINE|L1 -32337 NR_029408 439994 Hs.651188 NR_029408 ENSG00000224914 LINC00863 - long intergenic non-protein coding RNA 863 ncRNA chr2-6439 chr2 154259748 154259958 + 11.8 0.000 intron (NM_052917, intron 8 of 12) intron (NM_052917, intron 8 of 12) 197585 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr11-8586 chr11 1218585 1218795 + 11.8 0.000 Intergenic Intergenic -4376 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chrX-1369 chrX 150889192 150889402 + 11.8 0.000 intron (NM_001242614, intron 1 of 11) intron (NM_001242614, intron 1 of 11) 9371 NM_134445 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr3-4816 chr3 131709716 131709926 + 11.8 0.000 intron (NM_130808, intron 3 of 15) L2a|LINE|L2 -206850 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr16-1437 chr16 62417794 62418004 + 11.8 0.000 Intergenic L1MA4A|LINE|L1 -381461 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr8-1330 chr8 26661841 26662051 + 11.8 0.000 Intergenic Intergenic 83541 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr11-2900 chr11 62799933 62800143 + 11.8 0.000 3' UTR (NM_001081491, exon 10 of 20) 3' UTR (NM_001081491, exon 10 of 20) 5402 NM_001081491 10482 Hs.523739 NM_006362 ENSG00000162231 NXF1 MEX67|TAP nuclear RNA export factor 1 protein-coding chr1-9609 chr1 45429745 45429955 + 11.8 0.000 intron (NM_001320800, intron 1 of 9) LTR54|LTR|ERV1 61313 NM_001320800 10420 Hs.591499 NM_007170 ENSG00000070759 TESK2 - testis associated actin remodelling kinase 2 protein-coding chr9-2272 chr9 117704419 117704629 + 11.8 0.000 exon (NM_138554, exon 1 of 3) exon (NM_138554, exon 1 of 3) 121 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr2-3874 chr2 38863415 38863625 + 11.8 0.000 intron (NM_001329963, intron 2 of 23) intron (NM_001329963, intron 2 of 23) 12414 NM_198963 90957 Hs.468226 NM_198963 ENSG00000163214 DHX57 DDX57 DExH-box helicase 57 protein-coding chr4-4681 chr4 85559916 85560126 + 11.8 0.000 intron (NM_001025616, intron 1 of 9) intron (NM_001025616, intron 1 of 9) 84871 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr20-2472 chr20 32133164 32133374 + 11.8 0.000 intron (NM_001363731, intron 2 of 17) (CTCTGC)n|Simple_repeat|Simple_repeat 23541 NM_001363731 9777 Hs.654665 NM_014742 ENSG00000101337 TM9SF4 dJ836N17.2 transmembrane 9 superfamily member 4 protein-coding chr8-4363 chr8 101763683 101763893 + 11.8 0.000 intron (NM_001040625, intron 4 of 6) MLT2B4|LTR|ERVL 27181 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr5-5234 chr5 117680576 117680786 + 11.8 0.000 Intergenic Intergenic -49680 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr10-2599 chr10 75230051 75230261 + 11.8 0.000 intron (NM_001324090, intron 11 of 11) intron (NM_001324090, intron 11 of 11) 5801 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr7-9579 chr7 147010589 147010799 + 11.8 0.000 intron (NM_014141, intron 2 of 22) L1MC4|LINE|L1 86915 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr10-3388 chr10 28250777 28250987 + 11.8 0.000 intron (NR_134518, intron 1 of 16) intron (NR_134518, intron 1 of 16) 31241 NM_173496 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr5-2024 chr5 54646464 54646674 + 11.8 0.000 Intergenic Intergenic 56755 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr3-1310 chr3 195259987 195260197 + 11.8 0.000 intron (NM_152531, intron 1 of 3) CpG 11067 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr2-7467 chr2 14928797 14929007 + 11.8 0.000 Intergenic Intergenic 296185 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr22-1702 chr22 50232591 50232801 + 11.8 0.000 intron (NM_020461, intron 3 of 24) intron (NM_020461, intron 3 of 24) 12327 NM_020461 85378 Hs.336431 NM_020461 ENSG00000128159 TUBGCP6 GCP-6|GCP6|MCCRP|MCCRP1|MCPHCR tubulin gamma complex associated protein 6 protein-coding chr10-2565 chr10 69839803 69840013 + 11.8 0.000 intron (NM_001368898, intron 3 of 33) L2a|LINE|L2 38002 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr7-2450 chr7 137508810 137509020 + 11.8 0.000 intron (NM_001321710, intron 21 of 32) intron (NM_001321710, intron 21 of 32) -165182 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr7-1209 chr7 75988187 75988397 + 11.8 0.000 exon (NM_001363462, exon 6 of 10) exon (NM_001363462, exon 6 of 10) 6303 NM_001363462 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr1-9535 chr1 39572701 39572911 + 11.8 0.000 intron (NR_125979, intron 3 of 3) intron (NR_125979, intron 3 of 3) 3984 NM_001135653 8761 Hs.169900 NM_003819 ENSG00000090621 PABPC4 APP-1|APP1|PABP4|iPABP poly(A) binding protein cytoplasmic 4 protein-coding chr1-6505 chr1 24694417 24694627 + 11.8 0.000 Intergenic MIR|SINE|MIR -50925 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr13-2554 chr13 65656829 65657039 + 11.8 0.000 Intergenic Intergenic -209113 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr22-2663 chr22 36216707 36216917 + 11.8 0.000 Intergenic Intergenic -11979 NM_030643 80832 Hs.115099 NM_030643 ENSG00000100336 APOL4 APOL-IV|APOLIV apolipoprotein L4 protein-coding chr11-6147 chr11 42053130 42053340 + 11.8 0.000 intron (NR_135065, intron 6 of 9) MER63B|DNA|hAT-Blackjack 32223 NR_135065 101928591 Hs.149771 NR_135065 LINC02745 - long intergenic non-protein coding RNA 2745 ncRNA chr12-2238 chr12 64010149 64010359 + 11.8 0.000 intron (NM_001346201, intron 3 of 21) intron (NM_001346201, intron 3 of 21) 165554 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr5-8857 chr5 152900752 152900962 + 11.8 0.000 intron (NR_109877, intron 2 of 4) intron (NR_109877, intron 2 of 4) 71492 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr14-609 chr14 67515151 67515361 + 11.8 0.000 promoter-TSS (NM_182526) promoter-TSS (NM_182526) -41 NM_001348544 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr12-1770 chr12 89391298 89391508 + 11.8 0.000 Intergenic Intergenic -38902 NM_001946 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr5-1427 chr5 1174417 1174627 + 11.8 0.000 intron (NR_109911, intron 4 of 4) intron (NR_109911, intron 4 of 4) 4083 NR_109911 101928857 Hs.593732 NR_109911 ENSG00000249201 CTD-3080P12.3 - uncharacterized LOC101928857 ncRNA chr6-1436 chr6 155646443 155646653 + 11.8 0.000 Intergenic Intergenic 131704 NR_134597 105378068 Hs.131541 NR_134596 LOC105378068 - uncharacterized LOC105378068 ncRNA chr17-5111 chr17 5445463 5445673 + 11.8 0.000 intron (NM_001199699, intron 10 of 10) intron (NM_001199699, intron 10 of 10) -6413 NM_001212 708 Hs.555866 NM_001212 ENSG00000108561 C1QBP COXPD33|GC1QBP|HABP1|SF2AP32|SF2p32|gC1Q-R|gC1qR|p32 complement C1q binding protein protein-coding chr1-8590 chr1 180360403 180360613 + 11.8 0.000 intron (NM_032360, intron 6 of 7) MER5A|DNA|hAT-Charlie 77882 NR_036067 100423032 NR_036067 ENSG00000265435 MIR3121 mir-3121 microRNA 3121 ncRNA chr5-5958 chr5 109399263 109399473 + 11.8 0.000 intron (NM_014819, intron 1 of 9) L1ME1|LINE|L1 10606 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr1-2908 chr1 15760503 15760713 + 11.8 0.000 intron (NM_001024216, intron 1 of 6) intron (NM_001024216, intron 1 of 6) 1813 NM_001024216 54751 Hs.530101 NM_017556 ENSG00000162458 FBLIM1 CAL|FBLP-1|FBLP1 filamin binding LIM protein 1 protein-coding chr15-1507 chr15 51649966 51650176 + 11.8 0.000 Intergenic Intergenic -27300 NM_015263 23312 Hs.511386 NM_015263 ENSG00000104093 DMXL2 DFNA71|PEPNS|RC3 Dmx like 2 protein-coding chr10-5942 chr10 121825264 121825474 + 11.8 0.000 intron (NM_001001976, intron 10 of 11) intron (NM_001001976, intron 10 of 11) 102662 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr17-5167 chr17 9802366 9802576 + 11.8 0.000 TTS (NM_001310219) TTS (NM_001310219) -10879 NM_001220493 201140 Hs.61684 NM_001105571 ENSG00000184544 DHRS7C SDR32C2 dehydrogenase/reductase 7C protein-coding chr21-742 chr21 40898362 40898572 + 11.8 0.000 Intergenic MSTA|LTR|ERVL-MaLR -51309 NM_001271534 1826 Hs.160418 NM_001389 ENSG00000171587 DSCAM CHD2|CHD2-42|CHD2-52 DS cell adhesion molecule protein-coding chr1-10377 chr1 155918649 155918859 + 11.8 0.000 intron (NM_014949, intron 10 of 13) Tigger3a|DNA|TcMar-Tigger 1288 NR_002974 677823 Hs.676501 NR_002974 ENSG00000207475 SNORA80E ACA42|SNORA42 small nucleolar RNA, H/ACA box 80E snoRNA chr7-1960 chr7 102912945 102913155 + 11.8 0.000 promoter-TSS (NM_005824) promoter-TSS (NM_005824) 50 NM_005824 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr16-2312 chr16 22942674 22942884 + 11.8 0.000 Intergenic MamGypLTR1c|LTR|Gypsy 128617 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr13-2457 chr13 49767709 49767919 + 11.8 0.000 intron (NM_002267, intron 1 of 16) intron (NM_002267, intron 1 of 16) 24868 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr9-2115 chr9 94757295 94757505 + 11.8 0.000 intron (NM_001193331, intron 1 of 7) intron (NM_001193331, intron 1 of 7) -2249 NM_001193329 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr12-5308 chr12 111889916 111890126 + 11.8 0.000 intron (NM_139078, intron 12 of 13) intron (NM_139078, intron 12 of 13) -9042 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo chr1-8043 chr1 240705634 240705844 + 11.8 0.000 Intergenic Intergenic -93584 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr22-3926 chr22 36597312 36597522 + 11.8 0.000 intron (NM_006078, intron 1 of 3) MIRb|SINE|MIR -68251 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr4-8669 chr4 179363337 179363547 + 11.8 0.000 Intergenic Intergenic -1455506 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr6-2168 chr6 24991777 24991987 + 11.8 0.000 intron (NM_001286446, intron 1 of 13) intron (NM_001286446, intron 1 of 13) 50406 NM_001286446 9750 Hs.559459 NM_014722 ENSG00000111913 RIPOR2 C6orf32|DFNB104|DIFF40|DIFF48|FAM65B|MYONAP|PL48 RHO family interacting cell polarization regulator 2 protein-coding chr9-2889 chr9 132972476 132972686 + 11.8 0.000 intron (NM_004188, intron 1 of 10) AluJo|SINE|Alu -6113 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr2-8117 chr2 79471272 79471482 + 11.8 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 29467 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA chr17-3050 chr17 80145386 80145596 + 11.8 0.000 intron (NM_014740, intron 1 of 11) AluSz6|SINE|Alu 1637 NM_014740 9775 Hs.389649 NM_014740 ENSG00000141543 EIF4A3 DDX48|Fal1|MUK34|NMP265|NUK34|RCPS|eIF-4A-III|eIF4A-III|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding chr18-1962 chr18 37330821 37331031 + 11.8 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 56466 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr14-1805 chr14 33146234 33146444 + 11.8 0.000 intron (NM_001164749, intron 2 of 11) MIRb|SINE|MIR 207460 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr5-1439 chr5 31911281 31911491 + 11.8 0.000 intron (NM_178140, intron 2 of 24) MIRb|SINE|MIR 24773 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chrX-1698 chrX 15453727 15453937 + 11.8 0.000 intron (NM_001018109, intron 5 of 9) intron (NM_001018109, intron 5 of 9) 37477 NR_037859 100532742 Hs.495728 NR_037859 PIR-FIGF - PIR-FIGF readthrough ncRNA chr3-6526 chr3 116386228 116386438 + 11.8 0.000 intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) 26309 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA chr16-1719 chr16 46554445 46554655 + 11.8 0.000 intron (NR_026556, intron 4 of 16) LTR13|LTR|ERVK 14547 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr2-14114 chr2 201172497 201172707 + 11.8 0.000 TTS (NM_001202515) TTS (NM_001202515) -10296 NM_032976 843 Hs.5353 NM_001230 ENSG00000003400 CASP10 ALPS2|FLICE2|MCH4 caspase 10 protein-coding chr22-637 chr22 19959409 19959619 + 11.8 0.000 intron (NM_001135162, intron 1 of 5) (AGCGG)n|Simple_repeat|Simple_repeat -3039 NM_007310 1312 Hs.370408 NM_000754 ENSG00000093010 COMT HEL-S-98n catechol-O-methyltransferase protein-coding chr2-3467 chr2 157439564 157439774 + 11.8 0.000 intron (NM_004288, intron 1 of 7) OldhAT1|DNA|hAT-Ac 4420 NM_004288 9595 Hs.270 NM_004288 ENSG00000115165 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding chr3-6244 chr3 67918601 67918811 + 11.8 0.000 intron (NR_109992, intron 6 of 6) intron (NR_109992, intron 6 of 6) -72886 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr15-1078 chr15 39922565 39922775 + 11.8 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -1778 NM_001271854 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr21-1127 chr21 37446160 37446370 + 11.8 0.000 intron (NM_001347721, intron 2 of 11) intron (NM_001347721, intron 2 of 11) 25966 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr2-7257 chr2 231421248 231421458 + 11.8 0.000 Intergenic Intergenic 25643 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr2-10736 chr2 32314117 32314327 + 11.8 0.000 3' UTR (NM_032312, exon 6 of 6) 3' UTR (NM_032312, exon 6 of 6) 36318 NM_032312 84272 Hs.468099 NM_032312 ENSG00000119820 YIPF4 FinGER4|Nbla11189 Yip1 domain family member 4 protein-coding chr3-5617 chr3 9785703 9785913 + 11.8 0.000 intron (NR_103488, intron 4 of 6) MLT1J1|LTR|ERVL-MaLR -6687 NM_001024960 10093 Hs.323342 NM_005718 ENSG00000241553 ARPC4 ARC20|P20-ARC actin related protein 2/3 complex subunit 4 protein-coding chr15-2666 chr15 76955618 76955828 + 11.8 0.000 Intergenic L2a|LINE|L2 23974 NM_001271837 5955 Hs.79088 NM_002902 ENSG00000117906 RCN2 E6BP|ERC-55|ERC55|TCBP49 reticulocalbin 2 protein-coding chr14-881 chr14 100693257 100693467 + 11.8 0.000 Intergenic Intergenic -33503 NM_003836 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chr10-2538 chr10 60078861 60079071 + 11.8 0.000 intron (NM_020987, intron 36 of 43) intron (NM_020987, intron 36 of 43) 62050 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr7-2700 chr7 25009342 25009552 + 11.8 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -29269 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr1-9899 chr1 69920952 69921162 + 11.8 0.000 TTS (NR_023916) TTS (NR_023916) 1735 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chr11-1570 chr11 95790418 95790628 + 11.8 0.000 promoter-TSS (NM_001363604) promoter-TSS (NM_001363604) 25 NM_014679 9702 Hs.101014 NM_014679 ENSG00000166037 CEP57 MVA2|PIG8|TSP57 centrosomal protein 57 protein-coding chr10-900 chr10 119652462 119652672 + 11.8 0.000 intron (NM_004281, intron 1 of 3) intron (NM_004281, intron 1 of 3) 1197 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr2-4723 chr2 237678058 237678268 + 11.8 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -14001 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr5-1192 chr5 67011175 67011385 + 11.8 0.000 intron (NM_001297651, intron 1 of 25) intron (NM_001297651, intron 1 of 25) 6625 NM_001290227 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr2-3938 chr2 61630558 61630768 + 11.8 0.000 Intergenic AluSc|SINE|Alu -92307 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr11-4907 chr11 62625732 62625942 + 11.8 0.000 exon (NM_198334, exon 24 of 24) exon (NM_198334, exon 24 of 24) -3662 NR_109991 26229 Hs.502759 NM_012200 ENSG00000149541 B3GAT3 GLCATI|JDSCD|glcUAT-I beta-1,3-glucuronyltransferase 3 protein-coding chr4-3445 chr4 93838280 93838490 + 11.8 0.000 Intergenic Intergenic 9632 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr17-3061 chr17 81149177 81149387 + 11.8 0.000 intron (NM_001080395, intron 1 of 13) (CACCACC)n|Simple_repeat|Simple_repeat -15974 NR_031652 100302229 NR_031652 ENSG00000221025 MIR1250 MIRN1250|hsa-mir-1250|mir-1250 microRNA 1250 ncRNA chr3-6040 chr3 49882458 49882668 + 11.8 0.000 Intergenic Intergenic -12657 NM_024046 79012 Hs.145156 NM_024046 ENSG00000164076 CAMKV 1G5|VACAMKL CaM kinase like vesicle associated protein-coding chr6-4416 chr6 27890557 27890767 + 11.8 0.000 exon (NM_003535, exon 1 of 1) exon (NM_003535, exon 1 of 1) 130 NM_003535 8356 Hs.484990 NM_003535 ENSG00000197153 HIST1H3J H3/j|H3FJ histone cluster 1 H3 family member j protein-coding chr7-2575 chr7 127875210 127875420 + 11.8 0.000 intron (NM_014390, intron 12 of 23) intron (NM_014390, intron 12 of 23) -122194 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr1-2973 chr1 156286011 156286221 + 11.8 0.000 intron (NM_032323, intron 2 of 3) intron (NM_032323, intron 2 of 3) 1791 NM_032323 84283 Hs.347408 NM_032323 ENSG00000163472 TMEM79 MATT transmembrane protein 79 protein-coding chrX-263 chrX 34657267 34657477 + 11.8 0.000 promoter-TSS (NM_031442) promoter-TSS (NM_031442) -87 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr6-4902 chr6 93799239 93799449 + 11.8 0.000 Intergenic Intergenic 81041 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr4-2416 chr4 106422020 106422230 + 11.8 0.000 Intergenic Intergenic -11499 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA chr7-1629 chr7 22851311 22851521 + 11.8 0.000 Intergenic Intergenic -2824 NR_146320 109729180 Hs.553139 NR_146320 SNHG26 - small nucleolar RNA host gene 26 ncRNA chr1-7435 chr1 46413108 46413318 + 11.8 0.000 exon (NM_001441, exon 14 of 15) exon (NM_001441, exon 14 of 15) 18896 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chrX-2739 chrX 126554301 126554511 + 11.8 0.000 Intergenic L2c|LINE|L2 -1592 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr1-3098 chr1 33311850 33312060 + 11.8 0.000 intron (NM_001080438, intron 4 of 4) intron (NM_001080438, intron 4 of 4) 9143 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding chr17-5710 chr17 56431665 56431875 + 11.8 0.000 intron (NM_001370326, intron 8 of 20) intron (NM_001370326, intron 8 of 20) -161929 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr21-471 chr21 43923739 43923949 + 11.8 0.000 intron (NM_001369880, intron 1 of 8) intron (NM_001369880, intron 1 of 8) -1554 NM_001037553 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr2-13401 chr2 140425579 140425789 + 11.8 0.000 intron (NM_018557, intron 66 of 90) AluSq|SINE|Alu 161001 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr11-2105 chr11 119759465 119759675 + 11.8 0.000 Intergenic Intergenic 29987 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chrX-1448 chrX 72727822 72728032 + 11.8 0.000 Intergenic Intergenic -13621 NM_002637 5255 Hs.201379 NM_002637 ENSG00000067177 PHKA1 PHKA phosphorylase kinase regulatory subunit alpha 1 protein-coding chr6-4624 chr6 46702514 46702724 + 11.8 0.000 non-coding (NR_144468, exon 4 of 4) non-coding (NR_144468, exon 4 of 4) -14454 NR_134643 101926934 Hs.664979 NR_134642 ENSG00000242973 LOC101926934 - uncharacterized LOC101926934 ncRNA chr6-1485 chr6 46491266 46491476 + 11.8 0.000 promoter-TSS (NM_001251974) promoter-TSS (NM_001251974) -48 NM_001251974 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr2-3146 chr2 187541720 187541930 + 11.8 0.000 intron (NM_001329239, intron 1 of 9) L2|LINE|L2 12610 NM_001329240 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr14-2846 chr14 28661421 28661631 + 11.8 0.000 Intergenic L1MCc|LINE|L1 103793 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr10-4084 chr10 52744172 52744382 + 11.8 0.000 intron (NR_155748, intron 1 of 2) intron (NR_155748, intron 1 of 2) 11127 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA chr18-1558 chr18 26513666 26513876 + 11.8 0.000 intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) 34782 NM_001142730 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr17-3808 chr17 40685392 40685602 + 11.8 0.000 Intergenic Intergenic 18255 NM_019016 192666 Hs.87383 NM_019016 ENSG00000167916 KRT24 K24|KA24 keratin 24 protein-coding chr17-4211 chr17 34587109 34587319 + 11.8 0.000 intron (NM_001304438, intron 1 of 8) intron (NM_001304438, intron 1 of 8) 6465 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr1-11476 chr1 108816591 108816801 + 11.8 0.000 intron (NM_152763, intron 15 of 15) intron (NM_152763, intron 15 of 15) 40398 NM_152763 254268 Hs.729441 NM_152763 ENSG00000162641 AKNAD1 C1orf62 AKNA domain containing 1 protein-coding chr20-1305 chr20 58174981 58175191 + 11.8 0.000 Intergenic Intergenic 24184 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr9-5850 chr9 130353635 130353845 + 11.8 0.000 intron (NM_001291815, intron 31 of 97) MIR|SINE|MIR 87980 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr1-3375 chr1 170562714 170562924 + 11.8 0.000 Intergenic MamGypLTR2b|LTR|Gypsy -30210 NR_125958 101928650 Hs.676662 NR_125958 GORAB-AS1 - GORAB antisense RNA 1 ncRNA chr11-4422 chr11 88666210 88666420 + 11.8 0.000 intron (NM_001143831, intron 2 of 8) MSTB2|LTR|ERVL-MaLR 161739 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr1-5084 chr1 110011683 110011893 + 11.8 0.000 intron (NM_001242673, intron 3 of 16) intron (NM_001242673, intron 3 of 16) 7840 NM_001242676 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr17-4971 chr17 80007495 80007705 + 11.8 0.000 intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) 28272 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr8-4222 chr8 86601972 86602182 + 11.8 0.000 intron (NM_019098, intron 15 of 17) intron (NM_019098, intron 15 of 17) 87642 NM_003909 8895 Hs.191219 NM_003909 ENSG00000085719 CPNE3 CPN3|PRO1071 copine 3 protein-coding chr9-1289 chr9 36470877 36471087 + 11.8 0.000 Intergenic Intergenic -69784 NM_194330 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr10-4995 chr10 31881581 31881791 + 11.8 0.000 intron (NM_001270696, intron 3 of 17) intron (NM_001270696, intron 3 of 17) 27240 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr21-871 chr21 40707478 40707688 + 11.8 0.000 intron (NR_073202, intron 2 of 32) intron (NR_073202, intron 2 of 32) -76816 NR_046774 100874326 Hs.679746 NR_046774 ENSG00000233756 DSCAM-IT1 zag4 DSCAM intronic transcript 1 ncRNA chr9-7647 chr9 62874919 62875129 + 11.8 0.000 intron (NR_122076, intron 1 of 5) intron (NR_122076, intron 1 of 5) -22352 NR_126047 728673 Hs.380240 NR_126047 ENSG00000170161 LOC728673 - uncharacterized LOC728673 ncRNA chr3-6339 chr3 81317490 81317700 + 11.8 0.000 Intergenic L1PREC2|LINE|L1 323727 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr1-12869 chr1 107619560 107619770 + 11.8 0.000 intron (NM_006113, intron 20 of 26) L3b|LINE|CR1 68834 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr2-1880 chr2 65435923 65436133 + 11.8 0.000 Intergenic CpG -3429 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr5-2268 chr5 34743820 34744030 + 11.8 0.000 intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 56366 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr17-2365 chr17 73017839 73018049 + 11.8 0.000 intron (NM_001352692, intron 4 of 9) L1MEf|LINE|L1 74744 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr16-2940 chr16 3587001 3587211 + 11.8 0.000 intron (NM_032444, intron 12 of 14) L1MB7|LINE|L1 -9703 NM_178844 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chr8-3846 chr8 31431495 31431705 + 11.8 0.000 Intergenic Intergenic -208152 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr18-1228 chr18 43491595 43491805 + 11.8 0.000 Intergenic L1ME1|LINE|L1 -214210 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr5-3302 chr5 122880686 122880896 + 11.8 0.000 intron (NM_014035, intron 1 of 6) intron (NM_014035, intron 1 of 6) 35178 NM_014035 28966 Hs.483200 NM_014035 ENSG00000064652 SNX24 PRO1284|SBBI31 sorting nexin 24 protein-coding chr3-2020 chr3 47244020 47244230 + 11.8 0.000 TTS (NR_033373) TTS (NR_033373) 6484 NR_145712 109617025 NR_145712 SNORD13J - small nucleolar RNA, C/D box 13J snoRNA chr5-1321 chr5 115816395 115816605 + 11.8 0.000 non-coding (NR_136620, exon 1 of 5) non-coding (NR_136620, exon 1 of 5) 157 NR_136621 1036 Hs.442378 NM_001801 ENSG00000129596 CDO1 CDO-I cysteine dioxygenase type 1 protein-coding chr7-5195 chr7 11155831 11156041 + 11.8 0.000 intron (NR_033436, intron 16 of 16) intron (NR_033436, intron 16 of 16) 182064 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr13-1601 chr13 44136835 44137045 + 11.8 0.000 intron (NR_104065, intron 1 of 4) intron (NR_104065, intron 1 of 4) -5388 NR_104064 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr5-6019 chr5 153676882 153677092 + 11.8 0.000 intron (NM_001364165, intron 6 of 14) intron (NM_001364165, intron 6 of 14) 184815 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr2-5349 chr2 95010831 95011041 + 11.8 0.000 Intergenic Intergenic -14719 NM_022438 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr6-1370 chr6 74441991 74442201 + 11.8 0.000 intron (NR_110856, intron 2 of 3) L1PA8A|LINE|L1 372645 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr4-4365 chr4 39539069 39539279 + 11.8 0.000 intron (NR_047679, intron 2 of 4) LTR106_Mam|LTR|LTR 11335 NR_047679 100885776 Hs.640769 NR_047679 ENSG00000249348 UGDH-AS1 - UGDH antisense RNA 1 ncRNA chr3-3612 chr3 86957015 86957225 + 11.8 0.000 intron (NM_001320494, intron 3 of 3) intron (NM_001320494, intron 3 of 3) 34029 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr12-3343 chr12 90262375 90262585 + 11.8 0.000 Intergenic Intergenic -30838 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr22-3223 chr22 40597751 40597961 + 11.8 0.000 intron (NM_020831, intron 1 of 14) intron (NM_020831, intron 1 of 14) 38863 NM_020831 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr20-312 chr20 62509204 62509414 + 11.8 0.000 Intergenic Intergenic -33314 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr7-3591 chr7 25323758 25323968 + 11.8 0.000 Intergenic Intergenic -95377 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr16-1500 chr16 11351039 11351249 + 11.8 0.000 non-coding (NR_130754, exon 2 of 2) non-coding (NR_130754, exon 2 of 2) 5685 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr20-976 chr20 47384189 47384399 + 11.8 0.000 non-coding (NR_146494, exon 4 of 4) non-coding (NR_146494, exon 4 of 4) 27100 NR_146495 102723442 NR_146494 LINC01754 - long intergenic non-protein coding RNA 1754 ncRNA chr7-5381 chr7 32226604 32226814 + 11.8 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 72619 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr12-5063 chr12 90842431 90842641 + 11.8 0.000 Intergenic L2a|LINE|L2 -75487 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr7-5218 chr7 13607824 13608034 + 11.8 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 378585 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr3-7044 chr3 173321886 173322096 + 11.8 0.000 Intergenic L1ME3B|LINE|L1 -73961 NM_001365929 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr19-4349 chr19 1996996 1997206 + 11.8 0.000 intron (NM_017797, intron 2 of 8) AluSc8|SINE|Alu 18613 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr19-1439 chr19 5557311 5557521 + 11.8 0.000 TTS (NR_027064) TTS (NR_027064) 10618 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr22-1916 chr22 46026868 46027078 + 11.8 0.000 Intergenic Intergenic 17895 NR_027036 100271722 Hs.528519 NR_027036 LINC00899 - long intergenic non-protein coding RNA 899 ncRNA chr9-2887 chr9 132006080 132006290 + 11.8 0.000 intron (NM_001253881, intron 3 of 6) intron (NM_001253881, intron 3 of 6) 73682 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr8-2218 chr8 20183082 20183292 + 11.8 0.000 promoter-TSS (NM_001142324) promoter-TSS (NM_001142324) 19 NM_001142325 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr22-2749 chr22 39790512 39790722 + 11.8 0.000 intron (NM_152512, intron 5 of 6) LTR78B|LTR|ERV1 103143 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr2-5002 chr2 218878153 218878363 + 11.8 0.000 Intergenic Intergenic -2594 NM_025216 80326 Hs.121540 NM_025216 ENSG00000135925 WNT10A OODD|SSPS|STHAG4 Wnt family member 10A protein-coding chrX-1092 chrX 8251342 8251552 + 11.8 0.000 Intergenic L2b|LINE|L2 -80180 NM_016378 51480 Hs.279737 NM_016378 ENSG00000177504 VCX2 VCX-2r|VCX2R|VCXB variable charge X-linked 2 protein-coding chr10-1941 chr10 12731139 12731349 + 11.8 0.000 intron (NM_001351032, intron 5 of 11) L2a|LINE|L2 -5891 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr10-1688 chr10 4586981 4587191 + 11.8 0.000 Intergenic A-rich|Low_complexity|Low_complexity -69070 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA chr12-5176 chr12 103968114 103968324 + 11.8 0.000 intron (NM_001363612, intron 1 of 8) L3|LINE|CR1 2347 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr12-2032 chr12 55325189 55325399 + 11.8 0.000 Intergenic LTR17|LTR|ERV1 4694 NM_001005182 390321 Hs.553763 NM_001005182 ENSG00000205330 OR6C1 OST267 olfactory receptor family 6 subfamily C member 1 protein-coding chr11-7398 chr11 85653499 85653709 + 11.8 0.000 intron (NM_032273, intron 2 of 4) intron (NM_032273, intron 2 of 4) 5637 NM_032273 84233 Hs.533725 NM_032273 ENSG00000171202 TMEM126A OPA7 transmembrane protein 126A protein-coding chr12-3152 chr12 47823797 47824007 + 11.8 0.000 Intergenic Intergenic -3999 NM_001098416 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr11-7701 chr11 68973415 68973625 + 11.8 0.000 Intergenic Intergenic 7466 NM_198923 116512 Hs.527802 NM_198923 ENSG00000172938 MRGPRD MRGD|TGR7 MAS related GPR family member D protein-coding chr5-5644 chr5 156828221 156828431 + 11.8 0.000 Intergenic L1PA13|LINE|L1 -21969 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr11-2735 chr11 19713745 19713955 + 11.8 0.000 non-coding (NR_015384, exon 1 of 1) non-coding (NR_015384, exon 1 of 1) 822 NR_015384 100126784 Hs.64341 NR_015384 LOC100126784 - uncharacterized LOC100126784 ncRNA chr12-4269 chr12 120134742 120134952 + 11.8 0.000 intron (NM_006836, intron 51 of 57) intron (NM_006836, intron 51 of 57) -18094 NM_001167606 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr1-7554 chr1 200997047 200997257 + 11.8 0.000 intron (NM_001252103, intron 14 of 33) L2a|LINE|L2 26562 NM_001252102 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr6-2439 chr6 167949153 167949363 + 11.8 0.000 intron (NM_001207008, intron 27 of 31) intron (NM_001207008, intron 27 of 31) 27681 NM_001129895 100128124 Hs.448059 NM_001129895 HGC6.3 - uncharacterized LOC100128124 protein-coding chr11-5923 chr11 14554470 14554680 + 11.8 0.000 intron (NM_148976, intron 2 of 10) L1MD2|LINE|L1 -34130 NM_002786 5682 Hs.102798 NM_002786 ENSG00000129084 PSMA1 HC2|HEL-S-275|NU|PROS30 proteasome subunit alpha 1 protein-coding chr9-2163 chr9 126619964 126620174 + 11.8 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 5626 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr3-2155 chr3 134427550 134427760 + 11.8 0.000 Intergenic Intergenic -10172 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA chr2-7081 chr2 170676958 170677168 + 11.8 0.000 Intergenic AluY|SINE|Alu 37504 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr13-1187 chr13 45201004 45201214 + 11.8 0.000 promoter-TSS (NM_198404) promoter-TSS (NM_198404) -64 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr15-3196 chr15 71503833 71504043 + 11.8 0.000 intron (NM_024817, intron 6 of 16) intron (NM_024817, intron 6 of 16) -43298 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr2-1766 chr2 156335514 156335724 + 11.8 0.000 TTS (NR_147695) TTS (NR_147695) -2898 NM_173173 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr9-2978 chr9 28364218 28364428 + 11.8 0.000 intron (NM_001354574, intron 4 of 5) intron (NM_001354574, intron 4 of 5) 354982 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr16-3913 chr16 82761956 82762166 + 11.8 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) -11258 NR_110938 101928446 Hs.684007 NR_110938 ENSG00000260862 LOC101928446 - uncharacterized LOC101928446 ncRNA chr16-3572 chr16 65723450 65723660 + 11.8 0.000 Intergenic Intergenic -147255 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr8-574 chr8 104589133 104589343 + 11.8 0.000 promoter-TSS (NM_001135703) promoter-TSS (NM_001135703) -214 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr7-3178 chr7 100203917 100204127 + 11.8 0.000 exon (NM_001282716, exon 26 of 34) exon (NM_001282716, exon 26 of 34) -15226 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr11-3527 chr11 8868529 8868739 + 11.8 0.000 intron (NM_005418, intron 2 of 22) MIRb|SINE|MIR 42317 NM_005418 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr19-4649 chr19 16183651 16183861 + 11.8 0.000 Intergenic AluSx1|SINE|Alu -1654 NM_014077 26017 Hs.631614 NM_014077 ENSG00000105058 FAM32A OTAG-12|OTAG12 family with sequence similarity 32 member A protein-coding chr11-2967 chr11 78269147 78269357 + 11.8 0.000 intron (NM_012296, intron 2 of 9) intron (NM_012296, intron 2 of 9) 72628 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr8-628 chr8 22622458 22622668 + 11.8 0.000 non-coding (NR_156436, exon 9 of 10) non-coding (NR_156436, exon 9 of 10) 17521 NM_021174 57805 Hs.744848 NM_021174 ENSG00000158941 CCAR2 DBC-1|DBC1|KIAA1967|NET35|p30 DBC|p30DBC cell cycle and apoptosis regulator 2 protein-coding chr13-970 chr13 114226164 114226374 + 11.8 0.000 Intergenic Intergenic -8576 NM_003903 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chr8-3315 chr8 30183079 30183289 + 11.8 0.000 3' UTR (NM_006571, exon 7 of 7) 3' UTR (NM_006571, exon 7 of 7) 26815 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr1-5966 chr1 32361064 32361274 + 11.8 0.000 TTS (NM_001167676) TTS (NM_001167676) 1074 NM_001167676 100128071 Hs.512763 NM_001167676 ENSG00000225828 FAM229A - family with sequence similarity 229 member A protein-coding chr1-4615 chr1 155860918 155861128 + 11.8 0.000 intron (NM_152280, intron 1 of 3) intron (NM_152280, intron 1 of 3) 1456 NM_152280 23208 Hs.32984 NM_152280 ENSG00000132718 SYT11 SYT12|sytXI synaptotagmin 11 protein-coding chr6-5058 chr6 114008614 114008824 + 11.8 0.000 intron (NR_125845, intron 4 of 9) MER51-int|LTR|ERV1 -37571 NM_001527 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr2-6183 chr2 5438188 5438398 + 11.8 0.000 Intergenic Intergenic 252825 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr15-2783 chr15 33802232 33802442 + 11.8 0.000 intron (NM_001243996, intron 69 of 102) intron (NM_001243996, intron 69 of 102) -166160 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr22-836 chr22 40603007 40603217 + 11.8 0.000 intron (NM_020831, intron 1 of 14) intron (NM_020831, intron 1 of 14) 33607 NM_020831 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr3-5375 chr3 149791797 149792007 + 11.8 0.000 intron (NM_001144960, intron 1 of 5) intron (NM_001144960, intron 1 of 5) 652 NM_001144960 389161 Hs.665988 NM_001144960 ENSG00000206199 ANKUB1 C3orf16 ankyrin repeat and ubiquitin domain containing 1 protein-coding chr9-2293 chr9 133679053 133679263 + 11.8 0.000 intron (NM_001134707, intron 17 of 20) intron (NM_001134707, intron 17 of 20) -21750 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr3-2892 chr3 48684896 48685106 + 11.8 0.000 intron (NM_016453, intron 1 of 12) intron (NM_016453, intron 1 of 12) 914 NM_016453 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr3-4552 chr3 138331204 138331414 + 11.8 0.000 Intergenic Intergenic -1458 NM_001349018 347736 Hs.660992 NM_178130 ENSG00000181322 NME9 NM23-H9|TXL-2|TXL2|TXNDC6 NME/NM23 family member 9 protein-coding chr19-4931 chr19 44070453 44070663 + 11.8 0.000 Intergenic Intergenic -1601 NM_001037813 342909 Hs.445395 NM_001037813 ENSG00000186026 ZNF284 ZNF284L zinc finger protein 284 protein-coding chr14-2562 chr14 33743690 33743900 + 11.8 0.000 intron (NM_001165893, intron 6 of 10) Tigger1|DNA|TcMar-Tigger 34858 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr11-4140 chr11 45230870 45231080 + 11.8 0.000 3' UTR (NM_001256695, exon 8 of 8) 3' UTR (NM_001256695, exon 8 of 8) 55366 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr1-7954 chr1 182865628 182865838 + 11.8 0.000 intron (NM_001357, intron 12 of 27) intron (NM_001357, intron 12 of 27) -26142 NR_148933 647070 Hs.191518 NR_148933 LOC647070 - uncharacterized LOC647070 ncRNA chr12-3493 chr12 123727877 123728087 + 11.8 0.000 intron (NM_012463, intron 6 of 19) intron (NM_012463, intron 6 of 19) 15629 NM_012463 23545 Hs.25786 NM_012463 ENSG00000185344 ATP6V0A2 A2|ARCL|ARCL2A|ATP6A2|ATP6N1D|J6B7|RTF|STV1|TJ6|TJ6M|TJ6S|VPH1|WSS ATPase H+ transporting V0 subunit a2 protein-coding chr4-3689 chr4 52100142 52100352 + 11.8 0.000 Intergenic Intergenic 48943 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr11-10572 chr11 122401028 122401238 + 11.8 0.000 intron (NR_137179, intron 1 of 4) L1PA11|LINE|L1 21738 NR_137179 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr22-738 chr22 43385883 43386093 + 11.8 0.000 Intergenic Intergenic -14343 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr16-2458 chr16 85471596 85471806 + 11.8 0.000 Intergenic AluJo|SINE|Alu -139708 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr11-2580 chr11 120400889 120401099 + 11.8 0.000 intron (NM_001301084, intron 1 of 40) intron (NM_001301084, intron 1 of 40) 15667 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr9-3647 chr9 93579078 93579288 + 11.8 0.000 intron (NM_005392, intron 1 of 21) MIR3|SINE|MIR 2599 NM_005392 5253 Hs.211441 NM_005392 ENSG00000197724 PHF2 CENP-35|GRC5|JHDM1E|KDM7C PHD finger protein 2 protein-coding chr8-1158 chr8 22169982 22170192 + 11.8 0.000 intron (NR_033404, intron 1 of 15) intron (NR_033404, intron 1 of 15) 4715 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr10-3372 chr10 21877926 21878136 + 11.8 0.000 intron (NM_022365, intron 8 of 11) Tigger2b_Pri|DNA|TcMar-Tigger 125699 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr17-5886 chr17 71424120 71424330 + 11.8 0.000 Intergenic Intergenic -222046 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr6-818 chr6 109440747 109440957 + 11.8 0.000 non-coding (NR_104429, exon 1 of 9) non-coding (NR_104429, exon 1 of 9) 128 NM_003080 6610 Hs.55235 NM_003080 ENSG00000135587 SMPD2 ISC1|NSMASE|NSMASE1 sphingomyelin phosphodiesterase 2 protein-coding chr17-2184 chr17 66654445 66654655 + 11.8 0.000 intron (NM_002737, intron 5 of 16) intron (NM_002737, intron 5 of 16) -132522 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr7-2938 chr7 140962829 140963039 + 11.8 0.000 Intergenic AluSp|SINE|Alu -38005 NM_004333 673 Hs.324250 NM_004333 ENSG00000157764 BRAF B-RAF1|B-raf|BRAF1|NS7|RAFB1 B-Raf proto-oncogene, serine/threonine kinase protein-coding chr2-8610 chr2 141214641 141214851 + 11.8 0.000 intron (NM_018557, intron 6 of 90) intron (NM_018557, intron 6 of 90) -628061 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2-6756 chr2 40577217 40577427 + 11.8 0.000 Intergenic L1MEd|LINE|L1 -64887 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr5-4118 chr5 78653713 78653923 + 11.8 0.000 Intergenic Intergenic -5046 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr4-8030 chr4 118841259 118841469 + 11.8 0.000 Intergenic LTR16B1|LTR|ERVL -5238 NM_014822 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr12-1564 chr12 113196959 113197169 + 11.8 0.000 intron (NM_138451, intron 2 of 2) intron (NM_138451, intron 2 of 2) 11343 NM_032848 84934 Hs.524762 NM_032848 ENSG00000139405 RITA1 C12orf52|RITA RBPJ interacting and tubulin associated 1 protein-coding chr8-696 chr8 17362918 17363128 + 11.8 0.000 intron (NM_004686, intron 3 of 13) intron (NM_004686, intron 3 of 13) 50328 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr4-1630 chr4 77026066 77026276 + 11.8 0.000 intron (NM_001306147, intron 9 of 11) intron (NM_001306147, intron 9 of 11) 48739 NM_001348133 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr16-1760 chr16 88804545 88804755 + 11.8 0.000 exon (NM_030928, exon 2 of 10) exon (NM_030928, exon 2 of 10) 861 NM_030928 81620 Hs.122908 NM_030928 ENSG00000167513 CDT1 DUP|RIS2 chromatin licensing and DNA replication factor 1 protein-coding chr18-697 chr18 43982038 43982248 + 11.8 0.000 Intergenic AluSz|SINE|Alu 549554 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr7-5645 chr7 55038300 55038510 + 11.8 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) 19373 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr3-5736 chr3 18501203 18501413 + 11.8 0.000 intron (NR_125803, intron 4 of 6) L1ME2z|LINE|L1 -55716 NM_001322872 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr14-2573 chr14 38261834 38262044 + 11.8 0.000 Intergenic L1P4a|LINE|L1 -5846 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr9-5103 chr9 35517318 35517528 + 11.8 0.000 intron (NM_001330740, intron 1 of 10) intron (NM_001330740, intron 1 of 10) -21209 NM_001135999 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr12-3379 chr12 100473522 100473732 + 11.8 0.000 promoter-TSS (NM_001206979) promoter-TSS (NM_001206979) -239 NM_001206978 9971 Hs.282735 NM_005123 ENSG00000012504 NR1H4 BAR|FXR|HRR-1|HRR1|PFIC5|RIP14 nuclear receptor subfamily 1 group H member 4 protein-coding chr22-2400 chr22 16526446 16526656 + 11.8 0.000 Intergenic Intergenic 66259 NM_014406 150160 Hs.128342 NM_014406 ENSG00000198445 CCT8L2 CESK1 chaperonin containing TCP1 subunit 8 like 2 protein-coding chr6-5372 chr6 150915975 150916185 + 11.8 0.000 intron (NM_001350486, intron 8 of 27) intron (NM_001350486, intron 8 of 27) 49594 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chrX-2210 chrX 41525155 41525365 + 11.8 0.000 intron (NM_003688, intron 25 of 26) L2c|LINE|L2 77800 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr10-3328 chr10 6667729 6667939 + 11.8 0.000 Intergenic Intergenic 32764 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr2-4826 chr2 64020681 64020891 + 11.8 0.000 Intergenic L1MA7|LINE|L1 -1358 NM_001005739 51542 Hs.48499 NM_016516 ENSG00000143952 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L VPS54 subunit of GARP complex protein-coding chr5-3033 chr5 16354280 16354490 + 11.8 0.000 Intergenic L1PA11|LINE|L1 86717 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA chr19-1966 chr19 57738351 57738561 + 11.8 0.000 Intergenic LTR13|LTR|ERVK -8359 NM_173632 284309 Hs.720254 NM_173632 ENSG00000152443 ZNF776 - zinc finger protein 776 protein-coding chr21-673 chr21 45937123 45937333 + 11.8 0.000 intron (NR_145492, intron 15 of 16) intron (NR_145492, intron 15 of 16) -35742 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr12-2741 chr12 28190828 28191038 + 11.8 0.000 promoter-TSS (NR_148936) promoter-TSS (NR_148936) -195 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr10-2320 chr10 57517505 57517715 + 11.8 0.000 Intergenic L1PA8|LINE|L1 -213051 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr20-1137 chr20 38434526 38434736 + 11.8 0.000 promoter-TSS (NR_003018) promoter-TSS (NR_003018) -632 NR_003018 677840 Hs.653086 NR_003018 ENSG00000200354 SNORA71D U71d small nucleolar RNA, H/ACA box 71D snoRNA chr7-4275 chr7 6333478 6333688 + 11.8 0.000 intron (NM_001037163, intron 1 of 1) AluJo|SINE|Alu 15384 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chr1-8324 chr1 52564419 52564629 + 11.8 0.000 Intergenic AluJr4|SINE|Alu -11432 NM_001009881 23318 Hs.655407 NM_015269 ENSG00000134744 TUT4 PAPD3|TENT3A|ZCCHC11 terminal uridylyl transferase 4 protein-coding chr1-7877 chr1 111553259 111553469 + 11.8 0.000 intron (NM_001370216, intron 1 of 7) LTR40a|LTR|ERVL 10639 NM_001302680 57413 Hs.281342 NM_020683 ENSG00000121933 TMIGD3 AD026 transmembrane and immunoglobulin domain containing 3 protein-coding chr10-4762 chr10 3704900 3705110 + 11.8 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 80204 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr10-1720 chr10 87093943 87094153 + 11.8 0.000 promoter-TSS (NM_001318902) promoter-TSS (NM_001318902) 39 NM_001318902 2746 Hs.500409 NM_005271 ENSG00000148672 GLUD1 GDH|GDH1|GLUD glutamate dehydrogenase 1 protein-coding chr2-6814 chr2 56328155 56328365 + 11.8 0.000 intron (NM_001348516, intron 2 of 2) intron (NM_001348516, intron 2 of 2) -142490 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr5-2370 chr5 82525538 82525748 + 11.8 0.000 Intergenic Intergenic 246181 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr9-3612 chr9 87591906 87592116 + 11.8 0.000 intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) 38557 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr5-2694 chr5 74667377 74667587 + 11.8 0.000 intron (NM_001292004, intron 1 of 13) LTR82B|LTR|ERVL -17751 NM_000521 3074 Hs.69293 NM_000521 ENSG00000049860 HEXB ENC-1AS|HEL-248|HEL-S-111 hexosaminidase subunit beta protein-coding chr18-935 chr18 76983287 76983497 + 11.8 0.000 intron (NM_001025081, intron 6 of 6) intron (NM_001025081, intron 6 of 6) 33663 NM_001025081 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr14-3184 chr14 71716415 71716625 + 11.8 0.000 intron (NM_001354286, intron 18 of 24) intron (NM_001354286, intron 18 of 24) 130222 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr12-3541 chr12 132669732 132669942 + 11.8 0.000 intron (NM_006231, intron 16 of 48) intron (NM_006231, intron 16 of 48) 17687 NM_006231 5426 Hs.524871 NM_006231 ENSG00000177084 POLE CRCS12|FILS|IMAGEI|POLE1 DNA polymerase epsilon, catalytic subunit protein-coding chr11-3217 chr11 67518624 67518834 + 11.8 0.000 TTS (NM_001318496) TTS (NM_001318496) 4717 NM_001318496 51475 Hs.278984 NM_016366 ENSG00000167791 CABP2 DFNB93 calcium binding protein 2 protein-coding chr6-1075 chr6 38273498 38273708 + 11.8 0.000 intron (NM_052893, intron 9 of 11) MER44B|DNA|TcMar-Tigger -207993 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr1-6767 chr1 77271851 77272061 + 11.8 0.000 Intergenic Intergenic -10063 NM_174858 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr7-5874 chr7 92267711 92267921 + 11.8 0.000 intron (NM_019004, intron 1 of 19) L2a|LINE|L2 -21716 NM_001350682 889 Hs.531987 NM_004912 ENSG00000001631 KRIT1 CAM|CCM1 KRIT1 ankyrin repeat containing protein-coding chr12-5094 chr12 94703118 94703328 + 11.8 0.000 Intergenic Intergenic -52666 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr17-2522 chr17 14738346 14738556 + 11.8 0.000 Intergenic Intergenic -276354 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr2-3606 chr2 85745537 85745747 + 11.8 0.000 Intergenic Intergenic -8349 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr2-8486 chr2 126970657 126970867 + 11.8 0.000 Intergenic Intergenic 71872 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr4-5199 chr4 161492159 161492369 + 11.8 0.000 intron (NM_001128428, intron 11 of 14) intron (NM_001128428, intron 11 of 14) -530469 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr6-1333 chr6 28104813 28105023 + 11.8 0.000 Intergenic CpG 14111 NR_024063 221584 Hs.634723 NR_024063 ZSCAN12P1 ZNF187p1|ZNF305P1|ZNF96L1|ZNF96P1|ZSCAN12L1|dJ313I6.7 zinc finger and SCAN domain containing 12 pseudogene 1 pseudo chr18-828 chr18 9619612 9619822 + 11.8 0.000 TTS (NR_110773) TTS (NR_110773) 4453 NR_110774 101927323 Hs.151204 NR_110773 ENSG00000263627 PPP4R1-AS1 - PPP4R1 antisense RNA 1 ncRNA chr4-4371 chr4 40186469 40186679 + 11.8 0.000 Intergenic MER1B|DNA|hAT-Charlie -4506 NM_001278368 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chr18-2022 chr18 44282375 44282585 + 11.8 0.000 Intergenic Intergenic 249217 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr1-4334 chr1 55543030 55543240 + 11.8 0.000 Intergenic L1MEj|LINE|L1 317494 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr2-6544 chr2 213479733 213479943 + 11.8 0.000 intron (NR_047660, intron 8 of 14) Charlie8|DNA|hAT-Charlie 195374 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr3-3962 chr3 52344386 52344596 + 11.8 0.000 exon (NM_015512, exon 9 of 78) exon (NM_015512, exon 9 of 78) 28172 NM_015512 25981 Hs.655469 NM_015512 ENSG00000114841 DNAH1 CILD37|DNAHC1|HDHC7|HL-11|HL11|HSRF-1|SPGF18|XLHSRF-1 dynein axonemal heavy chain 1 protein-coding chr2-1433 chr2 215728450 215728660 + 11.8 0.000 intron (NR_037195, intron 5 of 9) L2b|LINE|L2 10512 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr2-5222 chr2 46292292 46292502 + 11.8 0.000 Intergenic L2|LINE|L2 -5010 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr11-1617 chr11 62689516 62689726 + 11.8 0.000 promoter-TSS (NM_203422) promoter-TSS (NM_203422) -91 NM_203422 221091 Hs.427449 NM_203422 ENSG00000177363 LRRN4CL - LRRN4 C-terminal like protein-coding chr4-1335 chr4 156321324 156321534 + 11.8 0.000 Intergenic L2a|LINE|L2 -367563 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr5-2380 chr5 89144621 89144831 + 11.8 0.000 intron (NR_136221, intron 4 of 6) L1MB3|LINE|L1 -240621 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr6-2012 chr6 36236940 36237150 + 11.8 0.000 Intergenic Intergenic -6123 NM_173676 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr16-1372 chr16 49620424 49620634 + 11.8 0.000 intron (NM_001271620, intron 5 of 7) intron (NM_001271620, intron 5 of 7) 43795 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr20-1157 chr20 54044359 54044569 + 11.8 0.000 intron (NM_001366297, intron 3 of 8) intron (NM_001366297, intron 3 of 8) 14556 NM_001323347 8537 Hs.400556 NM_003657 ENSG00000064787 BCAS1 AIBC1|NABC1 breast carcinoma amplified sequence 1 protein-coding chr9-4097 chr9 129463513 129463723 + 11.8 0.000 Intergenic L2b|LINE|L2 -25042 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr2-1732 chr2 235779518 235779728 + 11.8 0.000 intron (NM_001037131, intron 6 of 17) intron (NM_001037131, intron 6 of 17) -261702 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr18-503 chr18 25830843 25831053 + 11.8 0.000 Intergenic Intergenic 259665 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr4-2541 chr4 71217772 71217982 + 11.8 0.000 intron (NM_001098484, intron 1 of 25) intron (NM_001098484, intron 1 of 25) 30591 NM_001134742 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr11-5861 chr11 10002381 10002591 + 11.8 0.000 intron (NM_030962, intron 7 of 39) intron (NM_030962, intron 7 of 39) 163344 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr12-2160 chr12 121806441 121806651 + 11.8 0.000 intron (NM_001353345, intron 3 of 15) intron (NM_001353345, intron 3 of 15) 1822 NM_001353345 23067 Hs.507122 NM_015048 ENSG00000139718 SETD1B KMT2G|Set1B SET domain containing 1B, histone lysine methyltransferase protein-coding chr9-7474 chr9 28365001 28365211 + 11.8 0.000 intron (NM_001354574, intron 4 of 5) L2c|LINE|L2 354199 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr11-2659 chr11 62613818 62614028 + 11.8 0.000 intron (NM_000327, intron 1 of 2) intron (NM_000327, intron 1 of 2) -1148 NM_153265 256364 Hs.379785 NM_153265 ENSG00000149499 EML3 ELP95|EMAP3|EMAP95 EMAP like 3 protein-coding chr8-4513 chr8 121289512 121289722 + 11.8 0.000 Intergenic Intergenic -349729 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr2-5420 chr2 112811947 112812157 + 11.8 0.000 Intergenic Intergenic 24727 NM_000576 3553 Hs.126256 NM_000576 ENSG00000125538 IL1B IL-1|IL1-BETA|IL1F2 interleukin 1 beta protein-coding chr7-2200 chr7 100691816 100692026 + 11.8 0.000 Intergenic Intergenic -2473 NM_022574 64599 Hs.414396 NM_022574 ENSG00000146830 GIGYF1 GYF1|PERQ1 GRB10 interacting GYF protein 1 protein-coding chr7-3711 chr7 55691491 55691701 + 11.8 0.000 intron (NR_003949, intron 2 of 5) intron (NR_003949, intron 2 of 5) -2136 NR_027339 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr19-2984 chr19 33368143 33368353 + 11.8 0.000 Intergenic Intergenic -5461 NM_001806 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr9-2731 chr9 94799969 94800179 + 11.8 0.000 intron (NM_001193331, intron 4 of 7) intron (NM_001193331, intron 4 of 7) -9888 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr1-7876 chr1 111538356 111538566 + 11.8 0.000 intron (NM_001081976, intron 1 of 5) intron (NM_001081976, intron 1 of 5) -3548 NM_001370216 5906 Hs.190334 NM_002884 ENSG00000116473 RAP1A C21KG|G-22K|KREV-1|KREV1|RAP1|SMGP21 RAP1A, member of RAS oncogene family protein-coding chr1-7967 chr1 196115784 196115994 + 11.8 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -27174 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr4-4641 chr4 81207923 81208133 + 11.8 0.000 intron (NM_006259, intron 1 of 18) intron (NM_006259, intron 1 of 18) 7089 NM_006259 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding chr7-4582 chr7 12358819 12359029 + 11.8 0.000 intron (NM_001135924, intron 16 of 28) intron (NM_001135924, intron 16 of 28) 44941 NM_001135924 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding chr10-1437 chr10 44569407 44569617 + 11.8 0.000 Intergenic MIRb|SINE|MIR -184415 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr3-5103 chr3 49028627 49028837 + 11.8 0.000 TTS (NM_001320585) TTS (NM_001320585) 666 NM_000884 3615 Hs.654400 NM_000884 ENSG00000178035 IMPDH2 IMPD2|IMPDH-II inosine monophosphate dehydrogenase 2 protein-coding chr22-2231 chr22 24580359 24580569 + 11.8 0.000 Intergenic L1ME1|LINE|L1 -3286 NM_013430 2678 Hs.595809 NM_005265 ENSG00000100031 GGT1 CD224|D22S672|D22S732|GGT|GGT 1|GGTD|GTG gamma-glutamyltransferase 1 protein-coding chr12-2541 chr12 102539696 102539906 + 11.8 0.000 Intergenic Intergenic -59238 NM_000618 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr6-4433 chr6 33913423 33913633 + 11.8 0.000 Intergenic Intergenic 14393 NR_106982 102466816 NR_106982 ENSG00000276824 MIR7159 hsa-mir-7159 microRNA 7159 ncRNA chr1-3439 chr1 19009874 19010084 + 11.8 0.000 Intergenic Intergenic -53303 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr6-4550 chr6 40922442 40922652 + 11.8 0.000 intron (NR_110873, intron 1 of 5) MLT1E2|LTR|ERVL-MaLR 100733 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr15-3784 chr15 68372668 68372878 + 11.8 0.000 intron (NM_001004439, intron 2 of 29) intron (NM_001004439, intron 2 of 29) 59390 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr16-4544 chr16 65079612 65079822 + 11.8 0.000 intron (NM_001330576, intron 1 of 11) L2c|LINE|L2 42346 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-3762 chr1 2258259 2258469 + 11.8 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 30045 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr10-2242 chr10 91689913 91690123 + 11.8 0.000 Intergenic L2b|LINE|L2 -56947 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chrX-2417 chrX 75392701 75392911 + 11.8 0.000 intron (NM_001146256, intron 9 of 10) HERVL-int|LTR|ERVL 118721 NM_145052 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chr2-9869 chr2 198931470 198931680 + 11.8 0.000 Intergenic Intergenic 526364 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr15-3319 chr15 79453752 79453962 + 11.8 0.000 intron (NM_015206, intron 1 of 3) intron (NM_015206, intron 1 of 3) 21341 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr12-4825 chr12 57136718 57136928 + 11.8 0.000 intron (NM_002332, intron 1 of 88) MIR|SINE|MIR 8340 NM_002332 4035 Hs.162757 NM_002332 ENSG00000123384 LRP1 A2MR|APOER|APR|CD91|IGFBP-3R|IGFBP3R|IGFBP3R1|KPA|LRP|LRP1A|TGFBR5 LDL receptor related protein 1 protein-coding chr3-2705 chr3 64266622 64266832 + 11.8 0.000 intron (NM_001370528, intron 1 of 7) intron (NM_001370528, intron 1 of 7) 1446 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr16-1866 chr16 79698479 79698689 + 11.8 0.000 Intergenic Intergenic -71887 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr15-722 chr15 60362942 60363152 + 11.8 0.000 intron (NM_001002857, intron 5 of 13) AluSz6|SINE|Alu 34939 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr17-5677 chr17 50612113 50612323 + 11.8 0.000 intron (NR_046057, intron 25 of 34) intron (NR_046057, intron 25 of 34) -22663 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr22-1217 chr22 37337264 37337474 + 11.8 0.000 Intergenic Intergenic 17470 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr15-2878 chr15 42012615 42012825 + 11.8 0.000 intron (NM_001206670, intron 2 of 19) intron (NM_001206670, intron 2 of 19) 37983 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chr2-4315 chr2 236744351 236744561 + 11.8 0.000 Intergenic Intergenic 174631 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr15-2188 chr15 87815171 87815381 + 11.8 0.000 Intergenic L1ME2z|LINE|L1 130992 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr5-2320 chr5 60675241 60675451 + 11.8 0.000 intron (NM_001145208, intron 2 of 9) intron (NM_001145208, intron 2 of 9) 24820 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr16-2658 chr16 55470663 55470873 + 11.8 0.000 Intergenic Intergenic -8062 NM_001302508 4313 Hs.513617 NM_004530 ENSG00000087245 MMP2 CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1 matrix metallopeptidase 2 protein-coding chr7-2563 chr7 105621348 105621558 + 11.8 0.000 intron (NM_138495, intron 6 of 9) intron (NM_138495, intron 6 of 9) -39911 NM_001355527 100130771 Hs.719432 NM_001355526 ENSG00000185055 EFCAB10 - EF-hand calcium binding domain 10 protein-coding chr3-5783 chr3 25164338 25164548 + 11.8 0.000 intron (NM_001290216, intron 3 of 10) intron (NM_001290216, intron 3 of 10) -176359 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr15-886 chr15 90233216 90233426 + 11.8 0.000 promoter-TSS (NM_001322811) promoter-TSS (NM_001322811) 620 NM_006384 10519 Hs.715556 NM_006384 ENSG00000185043 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 protein-coding chr6-3351 chr6 26234935 26235145 + 11.8 0.000 promoter-TSS (NM_005320) promoter-TSS (NM_005320) -52 NM_005320 3007 Hs.136857 NM_005320 ENSG00000124575 HIST1H1D H1.3|H1D|H1F3|H1s-2 histone cluster 1 H1 family member d protein-coding chr14-433 chr14 53153184 53153394 + 11.8 0.000 promoter-TSS (NM_001160147) promoter-TSS (NM_001160147) 34 NM_001160147 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding chr6-6998 chr6 20962930 20963140 + 11.8 0.000 intron (NM_017774, intron 10 of 15) intron (NM_017774, intron 10 of 15) 428578 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr15-1854 chr15 56190965 56191175 + 11.8 0.000 intron (NM_001370561, intron 4 of 11) LTR33|LTR|ERVL -1138 NM_001370554 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr15-559 chr15 61229128 61229338 + 11.8 0.000 promoter-TSS (NM_134261) promoter-TSS (NM_134261) 69 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr10-1474 chr10 114526832 114527042 + 11.8 0.000 promoter-TSS (NM_001322889) promoter-TSS (NM_001322889) -24 NM_001322899 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr8-3013 chr8 120668720 120668930 + 11.8 0.000 intron (NM_021021, intron 2 of 6) intron (NM_021021, intron 2 of 6) -92428 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr10-5545 chr10 86685096 86685306 + 11.8 0.000 intron (NM_007078, intron 5 of 13) intron (NM_007078, intron 5 of 13) 16637 NM_001080116 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr1-3689 chr1 172181083 172181293 + 11.8 0.000 intron (NR_146559, intron 15 of 20) intron (NR_146559, intron 15 of 20) -36353 NR_103486 100628315 Hs.584880 NR_038397 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA chr20-1182 chr20 3399069 3399279 + 11.8 0.000 intron (NM_001009984, intron 1 of 36) intron (NM_001009984, intron 1 of 36) 8488 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr2-1519 chr2 74503157 74503367 + 11.8 0.000 promoter-TSS (NM_001009812) promoter-TSS (NM_001009812) 54 NM_001009812 85474 Hs.516124 NM_001009812 ENSG00000179528 LBX2 LP3727 ladybird homeobox 2 protein-coding chr6-1789 chr6 112035558 112035768 + 11.8 0.000 Intergenic Intergenic -18412 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 CCN6 LIBC|PPAC|PPD|WISP-3|WISP3 cellular communication network factor 6 protein-coding chr1-4155 chr1 15454374 15454584 + 11.8 0.000 Intergenic Charlie16a|DNA|hAT-Charlie -2253 NM_033440 63036 Hs.631866 NM_033440 ENSG00000142615 CELA2A ELA2A|PE-1 chymotrypsin like elastase 2A protein-coding chr1-5194 chr1 174931454 174931664 + 11.8 0.000 intron (NM_001366451, intron 5 of 12) intron (NM_001366451, intron 5 of 12) 22702 NR_121196 101928696 Hs.666680 NR_121196 ENSG00000229531 LOC101928696 - uncharacterized LOC101928696 ncRNA chr12-5489 chr12 125247446 125247656 + 11.8 0.000 intron (NM_001366854, intron 1 of 8) MLT1K|LTR|ERVL-MaLR 61165 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr8-2644 chr8 69663725 69663935 + 11.8 0.000 Intergenic Intergenic 70930 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr18-820 chr18 5802319 5802529 + 11.8 0.000 Intergenic THE1D|LTR|ERVL-MaLR -38271 NR_039772 100616244 NR_039772 ENSG00000272380 MIR3976 - microRNA 3976 ncRNA chr18-1080 chr18 45106130 45106340 + 11.8 0.000 Intergenic Intergenic -61728 NM_001371319 chr1-3546 chr1 226624621 226624831 + 11.8 0.000 Intergenic L2b|LINE|L2 50342 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr8-1997 chr8 90595824 90596034 + 11.8 0.000 intron (NR_104062, intron 1 of 2) intron (NR_104062, intron 1 of 2) 10134 NR_104062 101937451 Hs.583685 NR_104062 ENSG00000253799 LINC01030 - long intergenic non-protein coding RNA 1030 ncRNA chr10-3414 chr10 32892624 32892834 + 11.8 0.000 Intergenic HERVL74-int|LTR|ERVL 8743 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr1-6223 chr1 218170240 218170450 + 11.8 0.000 Intergenic Intergenic -114948 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr13-1486 chr13 110250221 110250431 + 11.8 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 56831 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr8-4567 chr8 127376569 127376779 + 11.8 0.000 intron (NR_117099, intron 3 of 3) intron (NR_117099, intron 3 of 3) -23725 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA chr13-888 chr13 38373075 38373285 + 11.8 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 23329 NM_001286705 51569 Hs.643655 NM_016617 ENSG00000120686 UFM1 BM-002|C13orf20|HLD14 ubiquitin fold modifier 1 protein-coding chrX-2436 chrX 78974042 78974252 + 11.8 0.000 Intergenic L1PA6|LINE|L1 28756 NM_001324221 27334 Hs.296433 NM_014499 ENSG00000078589 P2RY10 LYPSR2|P2Y10 P2Y receptor family member 10 protein-coding chr7-2797 chr7 81846583 81846793 + 11.8 0.000 Intergenic Intergenic -76641 NM_001010933 3082 Hs.396530 NM_000601 ENSG00000019991 HGF DFNB39|F-TCF|HGFB|HPTA|SF hepatocyte growth factor protein-coding chr7-3870 chr7 105141256 105141466 + 11.8 0.000 intron (NM_182692, intron 11 of 15) intron (NM_182692, intron 11 of 15) 127156 NM_182931 55904 Hs.592262 NM_018682 ENSG00000005483 KMT2E HDCMC04P|MLL5|NKp44L lysine methyltransferase 2E protein-coding chr6-1446 chr6 160337399 160337609 + 11.8 0.000 Intergenic Intergenic -10874 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr11-3478 chr11 83650906 83651116 + 11.8 0.000 intron (NM_001142699, intron 18 of 27) L2a|LINE|L2 31414 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr4-4904 chr4 122055419 122055629 + 11.8 0.000 Intergenic Intergenic -103464 NM_001130698 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr5-5410 chr5 135901731 135901941 + 11.8 0.000 Intergenic Intergenic -5995 NM_000590 3578 Hs.960 NM_000590 ENSG00000145839 IL9 HP40|IL-9|P40 interleukin 9 protein-coding chr6-2880 chr6 7673077 7673287 + 11.8 0.000 Intergenic Intergenic -52917 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr9-3709 chr9 110141535 110141745 + 11.8 0.000 intron (NM_147150, intron 8 of 9) intron (NM_147150, intron 8 of 9) 16139 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr15-2791 chr15 35417117 35417327 + 11.8 0.000 intron (NM_080650, intron 5 of 8) intron (NM_080650, intron 5 of 8) -44858 NR_037507 100500904 NR_037507 ENSG00000265102 MIR3942 - microRNA 3942 ncRNA chrX-2931 chrX 153462234 153462444 + 11.8 0.000 intron (NR_073156, intron 4 of 12) intron (NR_073156, intron 4 of 12) 8292 NM_017518 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr17-5062 chr17 3469801 3470011 + 11.8 0.000 intron (NM_001321336, intron 1 of 8) AluSq|SINE|Alu 1841 NM_032598 84690 Hs.351068 NM_032598 ENSG00000141255 SPATA22 NYD-SP20|NYDSP20 spermatogenesis associated 22 protein-coding chr3-6981 chr3 167941736 167941946 + 11.8 0.000 Intergenic Intergenic 45893 NR_145443 646168 Hs.390443 NR_033843 ENSG00000244227 LRRC77P LINC01330 leucine rich repeat containing 77, pseudogene pseudo chr5-1914 chr5 172816936 172817146 + 11.8 0.000 Intergenic MIRc|SINE|MIR -17210 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr10-3659 chr10 100793273 100793483 + 11.8 0.000 intron (NM_003990, intron 6 of 10) intron (NM_003990, intron 6 of 10) 47667 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr2-3233 chr2 232535623 232535833 + 11.8 0.000 3' UTR (NM_000751, exon 12 of 12) 3' UTR (NM_000751, exon 12 of 12) -3964 NM_005199 1146 Hs.248101 NM_005199 ENSG00000196811 CHRNG ACHRG cholinergic receptor nicotinic gamma subunit protein-coding chr2-5156 chr2 27704790 27705000 + 11.8 0.000 TTS (NR_135200) TTS (NR_135200) 10837 NR_135200 100129995 Hs.515878 NR_135200 ENSG00000205334 LINC01460 - long intergenic non-protein coding RNA 1460 ncRNA chr15-1059 chr15 67199916 67200126 + 11.8 0.000 TTS (NM_024666) TTS (NM_024666) 33866 NM_001145104 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr11-3878 chr11 89606898 89607108 + 11.8 0.000 Intergenic Intergenic -17446 NM_001143837 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr1-4751 chr1 8078377 8078587 + 11.8 0.000 Intergenic Intergenic -52173 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr12-5388 chr12 120684752 120684962 + 11.8 0.000 Intergenic Intergenic -2292 NM_001303628 9761 Hs.744910 NM_014730 ENSG00000110917 MLEC KIAA0152 malectin protein-coding chr6-6584 chr6 139074213 139074423 + 11.8 0.000 Intergenic Intergenic 45573 NM_021243 58527 Hs.600861 NM_021243 ENSG00000146386 ABRACL C6orf115|Costars|HSPC280|PRO2013 ABRA C-terminal like protein-coding chr20-1036 chr20 50333872 50334082 + 11.8 0.000 Intergenic Intergenic -12635 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr22-721 chr22 31293657 31293867 + 11.8 0.000 Intergenic Intergenic -1228 NM_001135911 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr11-2498 chr11 66720243 66720453 + 11.8 0.000 intron (NM_006946, intron 2 of 36) intron (NM_006946, intron 2 of 36) 1051 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr7-1819 chr7 106775822 106776032 + 11.8 0.000 Intergenic Intergenic -89355 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr6-5888 chr6 43031903 43032113 + 11.8 0.000 Intergenic AluJr|SINE|Alu 10385 NM_033112 88745 Hs.309231 NM_033112 ENSG00000124541 RRP36 C6orf153|dJ20C7.4 ribosomal RNA processing 36 protein-coding chr8-1554 chr8 118004843 118005053 + 11.8 0.000 intron (NM_000127, intron 1 of 10) MIRb|SINE|MIR -84035 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr11-1959 chr11 132072322 132072532 + 11.8 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 161609 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr2-2923 chr2 240688539 240688749 + 11.8 0.000 non-coding (NR_149021, exon 3 of 3) non-coding (NR_149021, exon 3 of 3) 2310 NR_149021 285191 Hs.729906 NR_149021 LOC285191 - uncharacterized LOC285191 ncRNA chr11-5987 chr11 20047224 20047434 + 11.8 0.000 intron (NM_182964, intron 14 of 37) intron (NM_182964, intron 14 of 37) 1974 NR_046672 100874014 Hs.557916 NR_046672 ENSG00000254453 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA chr7-4009 chr7 143349282 143349492 + 11.8 0.000 intron (NR_046453, intron 19 of 21) intron (NR_046453, intron 19 of 21) 12693 NM_014690 9715 Hs.648908 NM_014690 ENSG00000159784 FAM131B - family with sequence similarity 131 member B protein-coding chr13-1900 chr13 47708702 47708912 + 11.8 0.000 Intergenic Intergenic 223815 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr10-3359 chr10 15527549 15527759 + 11.8 0.000 intron (NM_001291494, intron 27 of 28) intron (NM_001291494, intron 27 of 28) -156365 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr11-2952 chr11 74696470 74696680 + 11.8 0.000 exon (NM_001278473, exon 11 of 11) exon (NM_001278473, exon 11 of 11) 14792 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr9-1407 chr9 116647166 116647376 + 11.8 0.000 intron (NM_014010, intron 16 of 21) L2b|LINE|L2 39944 NM_198186 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr2-3300 chr2 99880303 99880513 + 11.8 0.000 intron (NM_001025108, intron 6 of 23) intron (NM_001025108, intron 6 of 23) 225175 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr14-3239 chr14 75832629 75832839 + 11.8 0.000 intron (NM_015072, intron 28 of 31) intron (NM_015072, intron 28 of 31) 149261 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr8-1925 chr8 39942739 39942949 + 11.8 0.000 intron (NM_194294, intron 1 of 10) MIR3|SINE|MIR 7889 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr20-2266 chr20 3121280 3121490 + 11.8 0.000 exon (NM_014948, exon 3 of 5) exon (NM_014948, exon 3 of 5) 14474 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chr2-12458 chr2 59937463 59937673 + 11.8 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 445468 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr19-1448 chr19 13014735 13014945 + 11.8 0.000 intron (NM_001365902, intron 1 of 10) intron (NM_001365902, intron 1 of 10) -9132 NM_001271044 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr3-6870 chr3 151927016 151927226 + 11.8 0.000 intron (NR_110203, intron 1 of 2) intron (NR_110203, intron 1 of 2) 1054 NR_110203 101928142 Hs.680207 NR_110202 AADACL2-AS1 - AADACL2 antisense RNA 1 ncRNA chr2-4812 chr2 52335758 52335968 + 11.8 0.000 intron (NR_135237, intron 8 of 10) intron (NR_135237, intron 8 of 10) -34785 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr2-8313 chr2 105887294 105887504 + 11.8 0.000 intron (NM_001004720, intron 3 of 3) intron (NM_001004720, intron 3 of 3) 35552 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr11-6568 chr11 71738109 71738319 + 11.8 0.000 Intergenic HERVH-int|LTR|ERV1 -49297 NM_001099653 55199 Hs.567527 NM_018172 ENSG00000158483 FAM86C1 FAM86C family with sequence similarity 86 member C1 protein-coding chr10-5285 chr10 69237617 69237827 + 11.8 0.000 intron (NM_025130, intron 4 of 17) intron (NM_025130, intron 4 of 17) -5232 NR_120648 101928994 Hs.562925 NR_120648 ENSG00000229261 LOC101928994 - uncharacterized LOC101928994 ncRNA chr2-14041 chr2 194745706 194745916 + 11.8 0.000 intron (NR_110223, intron 3 of 3) intron (NR_110223, intron 3 of 3) 15216 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr5-3296 chr5 119897396 119897606 + 11.8 0.000 Intergenic Intergenic 267942 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr11-2984 chr11 101458084 101458294 + 11.8 0.000 intron (NM_004621, intron 10 of 12) MER47A|DNA|TcMar-Tigger 61716 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr17-3901 chr17 50779250 50779460 + 11.8 0.000 Intergenic Intergenic 10705 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr13-635 chr13 103102580 103102790 + 11.8 0.000 Intergenic Intergenic -36268 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr13-518 chr13 47215932 47216142 + 11.8 0.000 Intergenic Intergenic -318961 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr2-3633 chr2 131048244 131048454 + 11.8 0.000 3' UTR (NM_001321747, exon 7 of 7) 3' UTR (NM_001321747, exon 7 of 7) 44813 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr2-5891 chr2 241072591 241072801 + 11.8 0.000 non-coding (NR_138463, exon 7 of 7) non-coding (NR_138463, exon 7 of 7) 29591 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr14-1424 chr14 70317901 70318111 + 11.8 0.000 Intergenic Intergenic 41677 NM_001204090 51241 Hs.709581 NM_016468 ENSG00000133983 COX16 C14orf112|HSPC203|hCOX16 cytochrome c oxidase assembly factor COX16 protein-coding chr7-5839 chr7 87116795 87117005 + 11.8 0.000 Intergenic L1MEf|LINE|L1 35417 NR_136252 101927420 Hs.633960 NR_136252 ENSG00000224046 LOC101927420 - uncharacterized LOC101927420 ncRNA chr3-4934 chr3 2177657 2177867 + 11.8 0.000 intron (NM_175607, intron 2 of 24) MLT2C2|LTR|ERVL -33521 NR_046555 100873976 Hs.611138 NR_046555 ENSG00000227588 CNTN4-AS2 - CNTN4 antisense RNA 2 ncRNA chr5-5827 chr5 177619734 177619944 + 11.8 0.000 intron (NR_026921, intron 5 of 5) intron (NR_026921, intron 5 of 5) 19707 NM_007255 11285 Hs.455109 NM_007255 ENSG00000027847 B4GALT7 EDSP1|EDSSLA|EDSSPD1|XGALT1|XGPT|XGPT1 beta-1,4-galactosyltransferase 7 protein-coding chr1-11111 chr1 230769317 230769527 + 11.8 0.000 intron (NM_016452, intron 6 of 18) intron (NM_016452, intron 6 of 18) 22034 NM_006615 10753 Hs.498021 NM_006615 ENSG00000135773 CAPN9 GC36|nCL-4 calpain 9 protein-coding chr12-2026 chr12 50537536 50537746 + 11.8 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 32656 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr7-2276 chr7 13641844 13642054 + 11.8 0.000 Intergenic Intergenic 344565 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr5-5512 chr5 143280636 143280846 + 11.8 0.000 non-coding (NR_157096, exon 8 of 8) non-coding (NR_157096, exon 8 of 8) 88241 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr8-1961 chr8 60749548 60749758 + 11.8 0.000 intron (NM_017780, intron 2 of 37) intron (NM_017780, intron 2 of 37) 8394 NM_001316690 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr3-3606 chr3 79210227 79210437 + 11.8 0.000 intron (NM_002941, intron 2 of 30) L1PB|LINE|L1 -190873 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr10-5149 chr10 52908957 52909167 + 11.8 0.000 Intergenic MSTA|LTR|ERVL-MaLR -137362 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr12-1007 chr12 3753146 3753356 + 11.8 0.000 promoter-TSS (NM_032680) promoter-TSS (NM_032680) -142 NM_032680 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr5-2603 chr5 127358350 127358560 + 11.8 0.000 intron (NM_001308121, intron 4 of 13) intron (NM_001308121, intron 4 of 13) 67659 NM_001256545 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr12-458 chr12 64610216 64610426 + 11.8 0.000 promoter-TSS (NM_178169) promoter-TSS (NM_178169) -174 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr17-3333 chr17 74960276 74960486 + 11.8 0.000 intron (NM_030630, intron 6 of 18) intron (NM_030630, intron 6 of 18) -10308 NR_110878 102723641 NR_110878 ENSG00000263586 HID1-AS1 - HID1 antisense RNA 1 ncRNA chr7-8034 chr7 19747671 19747881 + 11.8 0.000 intron (NM_001366627, intron 1 of 4) intron (NM_001366627, intron 1 of 4) 25005 NM_152774 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding chr18-600 chr18 58590328 58590538 + 11.8 0.000 intron (NM_052947, intron 3 of 12) intron (NM_052947, intron 3 of 12) -10187 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr4-2520 chr4 39135321 39135531 + 11.8 0.000 Intergenic LTR40b|LTR|ERVL -47103 NM_025132 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr4-2359 chr4 3339548 3339758 + 11.8 0.000 intron (NM_002926, intron 2 of 16) MER65A|LTR|ERV1 25506 NM_002926 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr13-1163 chr13 35697399 35697609 + 11.8 0.000 promoter-TSS (NR_132116) promoter-TSS (NR_132116) -20 NR_132116 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr7-4033 chr7 156658174 156658384 + 11.8 0.000 intron (NM_001308273, intron 6 of 8) intron (NM_001308273, intron 6 of 8) 14478 NM_001308274 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr1-12123 chr1 165111800 165112010 + 11.8 0.000 Intergenic Intergenic 244336 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr9-3707 chr9 110090284 110090494 + 11.8 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) -35112 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr2-2858 chr2 163208026 163208236 + 11.8 0.000 Intergenic Intergenic -369364 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr16-4400 chr16 50360413 50360623 + 11.8 0.000 intron (NM_013263, intron 2 of 16) intron (NM_013263, intron 2 of 16) 8470 NM_013263 29117 Hs.437894 NM_013263 ENSG00000166164 BRD7 BP75|CELTIX1|NAG4 bromodomain containing 7 protein-coding chr2-8892 chr2 178331138 178331348 + 11.8 0.000 intron (NM_001201480, intron 5 of 25) intron (NM_001201480, intron 5 of 25) 11001 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr6-4845 chr6 85613510 85613720 + 11.8 0.000 TTS (NM_001159675) TTS (NM_001159675) -19459 NR_146774 57231 Hs.485871 NM_020468 ENSG00000135317 SNX14 RGS-PX2|SCAR20 sorting nexin 14 protein-coding chr22-2499 chr22 22690097 22690307 + 11.8 0.000 Intergenic Intergenic 43890 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr3-3017 chr3 108548396 108548606 + 11.8 0.000 Intergenic MER58A|DNA|hAT-Charlie -19179 NM_014981 22989 Hs.731060 NM_014981 ENSG00000144821 MYH15 - myosin heavy chain 15 protein-coding chr16-2643 chr16 26987497 26987707 + 11.8 0.000 Intergenic Intergenic -79325 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr5-4847 chr5 63000991 63001201 + 11.8 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 422277 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr19-6369 chr19 12353028 12353238 + 11.8 0.000 intron (NM_030824, intron 3 of 5) intron (NM_030824, intron 3 of 5) 12550 NM_001363774 79973 Hs.253193 NM_030824 ENSG00000198342 ZNF442 - zinc finger protein 442 protein-coding chr5-1969 chr5 122727274 122727484 + 11.8 0.000 intron (NR_109881, intron 2 of 11) intron (NR_109881, intron 2 of 11) 3181 NR_109881 101927379 Hs.536399 NR_109881 ENSG00000251538 LINC02201 - long intergenic non-protein coding RNA 2201 ncRNA chr8-1587 chr8 133899374 133899584 + 11.8 0.000 intron (NR_125424, intron 3 of 3) intron (NR_125424, intron 3 of 3) 12983 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr1-8945 chr1 8563497 8563707 + 11.8 0.000 intron (NM_001042681, intron 4 of 22) intron (NM_001042681, intron 4 of 22) -68689 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chrX-190 chrX 23907942 23908152 + 11.8 0.000 promoter-TSS (NR_026545) promoter-TSS (NR_026545) 41 NM_152761 254158 Hs.351265 NM_152761 ENSG00000165182 CXorf58 - chromosome X open reading frame 58 protein-coding chr20-2383 chr20 17606667 17606877 + 11.8 0.000 intron (NM_001011546, intron 4 of 4) L1ME3A|LINE|L1 36697 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr5-2178 chr5 131993578 131993788 + 11.8 0.000 intron (NM_001205251, intron 2 of 19) intron (NM_001205251, intron 2 of 19) 17975 NM_001009185 23305 Hs.14945 NM_015256 ENSG00000164398 ACSL6 ACS2|FACL6|LACS 6|LACS2|LACS5 acyl-CoA synthetase long chain family member 6 protein-coding chr2-5722 chr2 216511918 216512128 + 11.8 0.000 Intergenic MIR3|SINE|MIR 13179 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr2-5274 chr2 62360741 62360951 + 11.8 0.000 Intergenic AluY|SINE|Alu 145325 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr5-3315 chr5 126731022 126731232 + 11.8 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 45359 NR_134485 102723557 Hs.582207 NR_134485 ENSG00000251072 LMNB1-DT - LMNB1 divergent transcript ncRNA chr17-1910 chr17 69072161 69072371 + 11.8 0.000 Intergenic L1P3|LINE|L1 -11339 NM_080283 10350 Hs.131686 NM_080283 ENSG00000154258 ABCA9 EST640918 ATP binding cassette subfamily A member 9 protein-coding chr1-3755 chr1 1575429 1575639 + 11.8 0.000 promoter-TSS (NM_014188) promoter-TSS (NM_014188) -671 NM_014188 29101 Hs.30026 NM_014188 ENSG00000160075 SSU72 HSPC182|PNAS-120 SSU72 homolog, RNA polymerase II CTD phosphatase protein-coding chr17-4629 chr17 8826325 8826535 + 11.8 0.000 intron (NM_001010855, intron 13 of 19) L1PA8|LINE|L1 -27065 NM_152599 162387 Hs.213603 NM_152599 ENSG00000185156 MFSD6L - major facilitator superfamily domain containing 6 like protein-coding chrX-630 chrX 113955803 113956013 + 11.8 0.000 Intergenic AluSp|SINE|Alu -17690 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr11-1998 chr11 45872815 45873025 + 11.8 0.000 intron (NM_001127457, intron 11 of 11) intron (NM_001127457, intron 11 of 11) -12731 NM_005456 9479 Hs.234249 NM_005456 ENSG00000121653 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding chr14-2906 chr14 38500213 38500423 + 11.8 0.000 Intergenic L1P4a|LINE|L1 -244225 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr5-2128 chr5 78320546 78320756 + 11.8 0.000 Intergenic Intergenic -25896 NM_003664 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding chr16-1844 chr16 66703731 66703941 + 11.8 0.000 Intergenic Intergenic -7093 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr12-3995 chr12 23887180 23887390 + 11.8 0.000 intron (NM_001330785, intron 2 of 14) intron (NM_001330785, intron 2 of 14) 62385 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr1-7193 chr1 212738422 212738632 + 11.8 0.000 exon (NM_001297736, exon 4 of 4) exon (NM_001297736, exon 4 of 4) -38687 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr6-3390 chr6 56364943 56365153 + 11.8 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) 29080 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr16-4273 chr16 25019187 25019397 + 11.8 0.000 Intergenic Intergenic -3923 NM_001006634 55114 Hs.373793 NM_018054 ENSG00000140750 ARHGAP17 MST066|MST110|MSTP038|MSTP066|MSTP110|NADRIN|PP367|PP4534|RICH-1|RICH1|WBP15 Rho GTPase activating protein 17 protein-coding chr19-2661 chr19 10655958 10656168 + 11.8 0.000 intron (NM_012218, intron 1 of 19) intron (NM_012218, intron 1 of 19) 1717 NM_004516 3609 Hs.465885 NM_004516 ENSG00000129351 ILF3 CBTF|DRBF|DRBP76|MMP4|MPHOSPH4|MPP4|MPP4110|NF-AT-90|NF110|NF110b|NF90|NF90a|NF90b|NF90c|NF90ctv|NFAR|NFAR-1|NFAR-2|NFAR110|NFAR2|NFAR90|TCP110|TCP80 interleukin enhancer binding factor 3 protein-coding chr19-3458 chr19 31582847 31583057 + 11.8 0.000 Intergenic Intergenic -5237 NM_001278576 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr12-4510 chr12 23139184 23139394 + 11.8 0.000 Intergenic Intergenic -36347 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr13-953 chr13 102344577 102344787 + 11.8 0.000 intron (NM_001321941, intron 1 of 5) intron (NM_001321941, intron 1 of 5) -22848 NR_125912 100874081 Hs.569296 NR_125912 ENSG00000234445 FGF14-AS1 - FGF14 antisense RNA 1 ncRNA chr4-1914 chr4 52168548 52168758 + 11.8 0.000 Intergenic L1PA5|LINE|L1 117349 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr13-2606 chr13 75250746 75250956 + 11.8 0.000 intron (NR_132375, intron 2 of 2) intron (NR_132375, intron 2 of 2) 10263 NR_132375 106144536 Hs.591226 NR_132375 LINC01078 - long intergenic non-protein coding RNA 1078 ncRNA chr3-4191 chr3 129047314 129047524 + 11.8 0.000 Intergenic Intergenic -13348 NM_000174 2815 Hs.1144 NM_000174 ENSG00000169704 GP9 CD42a|GPIX glycoprotein IX platelet protein-coding chr16-1611 chr16 80594839 80595049 + 11.8 0.000 Intergenic LTR78|LTR|ERV1 -22136 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr1-4539 chr1 52140432 52140642 + 11.8 0.000 Intergenic Intergenic -1552 NM_007324 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr12-1339 chr12 124021034 124021244 + 11.8 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 47924 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr5-8974 chr5 161230705 161230915 + 11.8 0.000 Intergenic Intergenic -292184 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr2-6555 chr2 218499100 218499310 + 11.8 0.000 intron (NM_020935, intron 11 of 25) AluSc8|SINE|Alu 69146 NM_020935 57695 Hs.166068 NM_020935 ENSG00000135913 USP37 - ubiquitin specific peptidase 37 protein-coding chr20-1601 chr20 5844084 5844294 + 11.8 0.000 intron (NM_001303478, intron 3 of 3) intron (NM_001303478, intron 3 of 3) -67321 NM_001819 1114 Hs.516874 NM_001819 ENSG00000089199 CHGB SCG1 chromogranin B protein-coding chr3-3234 chr3 30099251 30099461 + 11.8 0.000 Intergenic Intergenic -165200 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr14-1861 chr14 73415208 73415418 + 11.8 0.000 intron (NM_001005743, intron 1 of 12) intron (NM_001005743, intron 1 of 12) 43267 NM_001005744 8650 Hs.525443 NM_003744 ENSG00000133961 NUMB C14orf41|S171|c14_5527 NUMB endocytic adaptor protein protein-coding chr5-4103 chr5 72921231 72921441 + 11.8 0.000 Intergenic Intergenic -34705 NM_138782 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr3-6702 chr3 133364054 133364264 + 11.8 0.000 intron (NM_001282865, intron 2 of 3) MIR|SINE|MIR -35897 NM_003571 8419 Hs.659862 NM_003571 ENSG00000170819 BFSP2 CP47|CP49|CTRCT12|LIFL-L|PHAKOSIN beaded filament structural protein 2 protein-coding chr13-2348 chr13 35377600 35377810 + 11.8 0.000 intron (NM_015678, intron 38 of 57) intron (NM_015678, intron 38 of 57) 98984 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr4-4830 chr4 108820868 108821078 + 11.8 0.000 intron (NR_045756, intron 32 of 35) intron (NR_045756, intron 32 of 35) -57920 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr14-2425 chr14 67649744 67649954 + 11.8 0.000 3' UTR (NM_006370, exon 6 of 6) 3' UTR (NM_006370, exon 6 of 6) 24783 NM_006370 10490 Hs.741177 NM_006370 ENSG00000100568 VTI1B VTI1|VTI1-LIKE|VTI1L|VTI2|v-SNARE|vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding chr8-1726 chr8 140891463 140891673 + 11.8 0.000 intron (NM_001352700, intron 1 of 34) L1MEg1|LINE|L1 109436 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr3-1585 chr3 139344005 139344215 + 11.8 0.000 promoter-TSS (NM_001363857) promoter-TSS (NM_001363857) 116 NM_001363893 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr3-6468 chr3 108132980 108133190 + 11.8 0.000 intron (NR_110028, intron 1 of 2) intron (NR_110028, intron 1 of 2) 7264 NR_110028 101929623 Hs.570653 NR_110028 ENSG00000271856 LINC01215 - long intergenic non-protein coding RNA 1215 ncRNA chr2-5788 chr2 227415708 227415918 + 11.8 0.000 Intergenic Intergenic -36507 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr2-3768 chr2 9509188 9509398 + 11.8 0.000 intron (NM_003183, intron 11 of 18) intron (NM_003183, intron 11 of 18) 34238 NM_001320858 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr7-2918 chr7 134670072 134670282 + 11.8 0.000 intron (NM_001724, intron 2 of 2) intron (NM_001724, intron 2 of 2) 23324 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr12-3255 chr12 64675581 64675791 + 11.8 0.000 intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) -53081 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr1-9432 chr1 33467943 33468153 + 11.8 0.000 Intergenic Intergenic -4597 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr1-2330 chr1 202149657 202149867 + 11.8 0.000 intron (NM_001199797, intron 9 of 9) MIRc|SINE|MIR -5019 NM_001256129 127829 Hs.497399 NM_138795 ENSG00000143862 ARL8A ARL10B|GIE2 ADP ribosylation factor like GTPase 8A protein-coding chr11-3063 chr11 11480928 11481138 + 11.8 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) -127783 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr12-3036 chr12 792993 793203 + 11.8 0.000 intron (NM_001184985, intron 1 of 27) intron (NM_001184985, intron 1 of 27) 40175 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr4-3103 chr4 155596029 155596239 + 11.8 0.000 Intergenic Intergenic -70576 NM_001130687 2982 Hs.24258 NM_000856 ENSG00000164116 GUCY1A1 GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6 guanylate cyclase 1 soluble subunit alpha 1 protein-coding chr3-3336 chr3 8518632 8518842 + 11.8 0.000 intron (NM_001278233, intron 1 of 4) intron (NM_001278233, intron 1 of 4) 16914 NM_001278233 29995 Hs.475353 NM_014583 ENSG00000071282 LMCD1 - LIM and cysteine rich domains 1 protein-coding chr22-2255 chr22 29555104 29555314 + 11.8 0.000 3' UTR (NM_003634, exon 10 of 10) 3' UTR (NM_003634, exon 10 of 10) -1452 NM_001002877 8563 Hs.75361 NM_003678 ENSG00000100296 THOC5 C22orf19|Fmip|PK1.3|fSAP79 THO complex 5 protein-coding chr11-2442 chr11 34014242 34014452 + 11.8 0.000 Intergenic Intergenic -37384 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chrX-1848 chrX 109968295 109968505 + 11.8 0.000 Intergenic L1ME1|LINE|L1 -34235 NM_001353851 84187 Hs.496572 NM_017698 ENSG00000157600 TMEM164 bB360B22.3 transmembrane protein 164 protein-coding chr16-6785 chr16 77651699 77651909 + 11.8 0.000 Intergenic Intergenic -70688 NM_001243661 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr10-5033 chr10 35112372 35112582 + 11.8 0.000 Intergenic L1MEc|LINE|L1 -14364 NM_001881 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr7-1303 chr7 75784793 75785003 + 11.8 0.000 intron (NM_006072, intron 1 of 3) HERVH-int|LTR|ERV1 4848 NM_006072 10344 Hs.131342 NM_006072 ENSG00000006606 CCL26 IMAC|MIP-4a|MIP-4alpha|SCYA26|TSC-1 C-C motif chemokine ligand 26 protein-coding chr1-10836 chr1 204108546 204108756 + 11.8 0.000 intron (NM_005686, intron 1 of 13) intron (NM_005686, intron 1 of 13) -32757 NR_123739 101929441 Hs.736889 NR_123739 ENSG00000230550 ERLNC1 ElncRNA1|TC0101441 estrogen receptor responsive lncRNA 1 ncRNA chr10-3733 chr10 116722046 116722256 + 11.8 0.000 intron (NM_001330164, intron 2 of 12) intron (NM_001330164, intron 2 of 12) 20415 NM_025015 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding chr2-4245 chr2 219782157 219782367 + 11.8 0.000 Intergenic Intergenic 122627 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr10-1630 chr10 78370079 78370289 + 11.8 0.000 Intergenic Intergenic 102842 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr19-1120 chr19 45506592 45506802 + 11.8 0.000 promoter-TSS (NM_003370) promoter-TSS (NM_003370) -782 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr4-1183 chr4 14853608 14853818 + 11.8 0.000 intron (NR_126435, intron 2 of 6) MLT1J1|LTR|ERVL-MaLR 34456 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr13-2500 chr13 52910316 52910526 + 11.8 0.000 Intergenic Intergenic -61781 NM_002590 5100 Hs.19492 NM_002590 ENSG00000136099 PCDH8 ARCADLIN|PAPC protocadherin 8 protein-coding chr1-4087 chr1 224812657 224812867 + 11.8 0.000 Intergenic Intergenic -116892 NM_144989 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr2-2513 chr2 172021811 172022021 + 11.8 0.000 intron (NM_001322279, intron 1 of 9) intron (NM_001322279, intron 1 of 9) 21963 NR_136276 254042 Hs.298250 NM_199227 ENSG00000172878 METAP1D MAP 1D|MAP1D|MetAP 1D|Metap1l methionyl aminopeptidase type 1D, mitochondrial protein-coding chr18-804 chr18 75246972 75247182 + 11.8 0.000 intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 35548 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr5-2461 chr5 137078011 137078221 + 11.8 0.000 intron (NM_004598, intron 5 of 10) intron (NM_004598, intron 5 of 10) -50081 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr3-5784 chr3 25449095 25449305 + 11.8 0.000 intron (NR_110892, intron 1 of 6) intron (NR_110892, intron 1 of 6) -9110 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr2-9169 chr2 213199987 213200197 + 11.8 0.000 Intergenic Intergenic -32382 NR_146974 105373863 Hs.258045 NR_146974 LINC01953 - long intergenic non-protein coding RNA 1953 ncRNA chr8-5354 chr8 18380930 18381140 + 11.8 0.000 Intergenic Intergenic -10247 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr11-6142 chr11 41306423 41306633 + 11.8 0.000 intron (NM_001258419, intron 1 of 6) L2a|LINE|L2 153108 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr12-3388 chr12 102769577 102769787 + 11.8 0.000 Intergenic Intergenic 54717 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr10-3637 chr10 97584754 97584964 + 11.8 0.000 TTS (NM_001291219) TTS (NM_001291219) 470 NM_138413 112817 Hs.180346 NM_138413 ENSG00000241935 HOGA1 C10orf65|DHDPS2|DHDPSL|HP3|NPL2 4-hydroxy-2-oxoglutarate aldolase 1 protein-coding chr6-2671 chr6 7361594 7361804 + 11.8 0.000 intron (NM_001170692, intron 9 of 13) intron (NM_001170692, intron 9 of 13) 28043 NM_001170692 285782 Hs.721486 NM_175745 ENSG00000164304 CAGE1 CT3|CT95|CTAG3|bA69L16.7 cancer antigen 1 protein-coding chr4-4832 chr4 108881250 108881460 + 11.8 0.000 intron (NM_198721, intron 18 of 36) intron (NM_198721, intron 18 of 36) -118302 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr22-2724 chr22 38582857 38583067 + 11.8 0.000 3' UTR (NM_001291030, exon 17 of 17) 3' UTR (NM_001291030, exon 17 of 17) 12462 NR_134627 105373031 Hs.144041 NR_134627 LOC105373031 - uncharacterized LOC105373031 ncRNA chr12-4801 chr12 55581167 55581377 + 11.8 0.000 Intergenic Intergenic 6857 NM_001258285 121129 Hs.742584 NM_001258285 ENSG00000179615 OR2AP1 OR2AP1P olfactory receptor family 2 subfamily AP member 1 protein-coding chr2-3691 chr2 204958420 204958630 + 11.8 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 413050 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr3-6114 chr3 53460622 53460832 + 11.8 0.000 Intergenic Intergenic -33884 NM_001128840 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr5-3603 chr5 109911912 109912122 + 11.8 0.000 Intergenic Intergenic 28835 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr10-1671 chr10 124607829 124608039 + 11.8 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) -96094 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr13-2326 chr13 33169240 33169450 + 11.8 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) 16746 NM_001243466 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr1-1815 chr1 206705340 206705550 + 11.8 0.000 intron (NM_004759, intron 1 of 9) intron (NM_004759, intron 1 of 9) 20540 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr8-1487 chr8 38957443 38957653 + 11.8 0.000 intron (NM_021623, intron 10 of 11) intron (NM_021623, intron 10 of 11) -16680 NM_153692 203100 Hs.661014 NM_153692 ENSG00000169495 HTRA4 - HtrA serine peptidase 4 protein-coding chr2-2750 chr2 179298045 179298255 + 11.8 0.000 Intergenic Intergenic -33318 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr11-2350 chr11 94936373 94936583 + 11.8 0.000 Intergenic Intergenic 37078 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr3-8764 chr3 2934123 2934333 + 11.8 0.000 intron (NM_175607, intron 13 of 24) intron (NM_175607, intron 13 of 24) 42013 NM_001206956 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr7-1584 chr7 101618613 101618823 + 11.8 0.000 intron (NM_138403, intron 5 of 7) (CCCCTGC)n|Simple_repeat|Simple_repeat 10578 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chrX-2002 chrX 13935557 13935767 + 11.8 0.000 intron (NM_001318729, intron 1 of 6) intron (NM_001318729, intron 1 of 6) 2976 NM_001001994 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr11-6086 chr11 33941110 33941320 + 11.8 0.000 Intergenic Intergenic -49139 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr3-3001 chr3 101133686 101133896 + 11.8 0.000 Intergenic Intergenic -140301 NM_001349330 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr8-1923 chr8 38976551 38976761 + 11.8 0.000 exon (NM_153692, exon 3 of 9) exon (NM_153692, exon 3 of 9) 2428 NM_153692 203100 Hs.661014 NM_153692 ENSG00000169495 HTRA4 - HtrA serine peptidase 4 protein-coding chr2-3890 chr2 42901152 42901362 + 11.8 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -108674 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr10-1715 chr10 78972675 78972885 + 11.8 0.000 intron (NR_015429, intron 3 of 7) intron (NR_015429, intron 3 of 7) 94668 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr13-946 chr13 98842925 98843135 + 11.8 0.000 intron (NM_001366682, intron 38 of 53) intron (NM_001366682, intron 38 of 53) 10946 NR_046663 100874096 Hs.578066 NR_046663 ENSG00000229918 DOCK9-AS1 - DOCK9 antisense RNA 1 ncRNA chr16-3168 chr16 81543697 81543907 + 11.8 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) 9900 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr12-1605 chr12 49720224 49720434 + 11.8 0.000 Intergenic Intergenic -12924 NM_175736 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr12-1968 chr12 120371022 120371232 + 11.8 0.000 Intergenic Intergenic -1963 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chr4-2314 chr4 87507254 87507464 + 11.8 0.000 intron (NM_001128310, intron 1 of 11) intron (NM_001128310, intron 1 of 11) 22144 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr7-5206 chr7 12022167 12022377 + 11.8 0.000 Intergenic L1PA15|LINE|L1 -189022 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr3-7600 chr3 14208995 14209205 + 11.8 0.000 Intergenic L1MC4|LINE|L1 30283 NM_014463 27258 Hs.111632 NM_014463 ENSG00000170860 LSM3 SMX4|USS2|YLR438C LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr12-3076 chr12 11554153 11554363 + 11.8 0.000 intron (NR_033890, intron 5 of 7) intron (NR_033890, intron 5 of 7) 6228 NR_033890 338817 Hs.733066 NR_033890 ENSG00000247157 LINC01252 - long intergenic non-protein coding RNA 1252 ncRNA chr7-5842 chr7 87309652 87309862 + 11.8 0.000 Intergenic L1PA7|LINE|L1 35735 NR_015381 11257 Hs.274329 NM_007233 ENSG00000182165 TP53TG1 LINC00096|NCRNA00096|P53TG1|P53TG1-D|TP53AP1 TP53 target 1 ncRNA chr3-2569 chr3 108090379 108090589 + 11.8 0.000 intron (NM_198793, intron 1 of 8) intron (NM_198793, intron 1 of 8) 604 NM_198793 961 Hs.446414 NM_001777 ENSG00000196776 CD47 IAP|MER6|OA3 CD47 molecule protein-coding chr10-2729 chr10 112527006 112527216 + 11.8 0.000 exon (NM_001365714, exon 4 of 8) exon (NM_001365714, exon 4 of 8) -79508 NM_001351082 64429 Hs.196990 NM_022494 ENSG00000023041 ZDHHC6 DHHC-6|ZNF376 zinc finger DHHC-type containing 6 protein-coding chr1-7206 chr1 217076951 217077161 + 11.8 0.000 promoter-TSS (NM_001243507) promoter-TSS (NM_001243507) -64 NM_001243507 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr17-6912 chr17 35684500 35684710 + 11.8 0.000 intron (NM_001030006, intron 18 of 21) intron (NM_001030006, intron 18 of 21) -47034 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr6-2465 chr6 36463809 36464019 + 11.8 0.000 intron (NR_104481, intron 1 of 3) L1MC5a|LINE|L1 20914 NM_001286579 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr9-3129 chr9 88950866 88951076 + 11.8 0.000 Intergenic Intergenic -39892 NM_001001938 286223 Hs.585118 NM_001001938 ENSG00000213694 C9orf47 C9orf108|bA791O21.3 chromosome 9 open reading frame 47 protein-coding chr12-3340 chr12 90085591 90085801 + 11.8 0.000 Intergenic MIRb|SINE|MIR 138003 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA chr3-1877 chr3 129053354 129053564 + 11.8 0.000 Intergenic Intergenic -7308 NM_000174 2815 Hs.1144 NM_000174 ENSG00000169704 GP9 CD42a|GPIX glycoprotein IX platelet protein-coding chrX-2808 chrX 134782895 134783105 + 11.8 0.000 intron (NM_001170757, intron 8 of 9) intron (NM_001170757, intron 8 of 9) 13355 NM_001170756 159090 Hs.404706 NM_145284 ENSG00000156504 FAM122B SPACIA2 family with sequence similarity 122B protein-coding chr12-2294 chr12 113665150 113665360 + 11.8 0.000 Intergenic Intergenic 108428 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr1-3637 chr1 54861286 54861496 + 11.8 0.000 intron (NM_014762, intron 6 of 8) L2a|LINE|L2 25804 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr9-1778 chr9 135778180 135778390 + 11.8 0.000 intron (NM_001272003, intron 20 of 30) MIR3|SINE|MIR 76100 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr16-2641 chr16 26511584 26511794 + 11.8 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 486452 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr11-5934 chr11 15609688 15609898 + 11.8 0.000 Intergenic MLT2D|LTR|ERVL -34092 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr2-3660 chr2 170843713 170843923 + 11.8 0.000 intron (NM_000817, intron 6 of 16) Plat_L3|LINE|CR1 26931 NM_000817 2571 Hs.420036 NM_000817 ENSG00000128683 GAD1 CPSQ1|GAD|SCP glutamate decarboxylase 1 protein-coding chr8-1086 chr8 145052573 145052783 + 11.8 0.000 exon (NM_023080, exon 2 of 5) exon (NM_023080, exon 2 of 5) 211 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding chr8-2062 chr8 122787906 122788116 + 11.8 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 6356 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr11-3498 chr11 121087078 121087288 + 11.8 0.000 3' UTR (NM_001130047, exon 8 of 8) 3' UTR (NM_001130047, exon 8 of 8) -15483 NM_005422 7007 Hs.248162 NM_005422 ENSG00000109927 TECTA DFNA12|DFNA8|DFNB21 tectorin alpha protein-coding chr9-3463 chr9 3904397 3904607 + 11.8 0.000 intron (NM_001042413, intron 6 of 10) MLT2C1|LTR|ERVL 5856 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr5-2295 chr5 53741374 53741584 + 11.8 0.000 Intergenic L1PB1|LINE|L1 78203 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr12-2628 chr12 127530202 127530412 + 11.8 0.000 Intergenic Intergenic 106160 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LINC02411 - long intergenic non-protein coding RNA 2411 ncRNA chr22-2185 chr22 45717641 45717851 + 11.8 0.000 intron (NM_013236, intron 5 of 11) intron (NM_013236, intron 5 of 11) -42778 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr5-2964 chr5 168395147 168395357 + 11.8 0.000 intron (NM_001161661, intron 3 of 22) intron (NM_001161661, intron 3 of 22) -91219 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chrX-621 chrX 43408311 43408521 + 11.8 0.000 Intergenic Intergenic 231422 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr16-3298 chr16 89401493 89401703 + 11.8 0.000 intron (NR_045839, intron 2 of 9) MLT1C|LTR|ERVL-MaLR -29320 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr19-2466 chr19 2085522 2085732 + 11.8 0.000 intron (NM_130807, intron 1 of 4) intron (NM_130807, intron 1 of 4) 10699 NM_130807 126308 Hs.744938 NM_130807 ENSG00000172081 MOB3A MOB-LAK|MOB1C|MOBKL2A|moblak MOB kinase activator 3A protein-coding chr11-1650 chr11 118436188 118436398 + 11.8 0.000 promoter-TSS (NM_001197104) promoter-TSS (NM_001197104) -197 NM_001197104 4297 Hs.258855 NM_005933 ENSG00000118058 KMT2A ALL-1|CXXC7|HRX|HTRX1|MLL|MLL1|MLL1A|TRX1|WDSTS lysine methyltransferase 2A protein-coding chr11-4286 chr11 66818665 66818875 + 11.8 0.000 intron (NM_024650, intron 11 of 16) intron (NM_024650, intron 11 of 16) -24671 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr10-3618 chr10 94126040 94126250 + 11.8 0.000 intron (NM_001165979, intron 1 of 31) MamRTE1|LINE|RTE-BovB -17351 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr14-3134 chr14 68000073 68000283 + 11.8 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 176586 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr4-2462 chr4 800114 800324 + 11.8 0.000 intron (NM_006651, intron 2 of 3) MER21A|LTR|ERVL -18371 NR_036511 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr9-4486 chr9 35577711 35577921 + 11.8 0.000 Intergenic MER66-int|LTR|ERV1 -13938 NM_001287238 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr8-2651 chr8 72565854 72566064 + 11.8 0.000 intron (NM_004770, intron 1 of 2) L2b|LINE|L2 28734 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr11-1659 chr11 2753005 2753215 + 11.8 0.000 intron (NM_181798, intron 11 of 15) intron (NM_181798, intron 11 of 15) -53112 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr8-740 chr8 26637482 26637692 + 11.8 0.000 intron (NM_001244604, intron 8 of 13) intron (NM_001244604, intron 8 of 13) 59182 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr14-951 chr14 50045124 50045334 + 11.8 0.000 intron (NR_131171, intron 4 of 8) intron (NR_131171, intron 4 of 8) -37709 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr10-5944 chr10 121981071 121981281 + 11.8 0.000 Intergenic LTR33|LTR|ERVL -5959 NM_017615 54780 Hs.258798 NM_017615 ENSG00000107672 NSMCE4A C10orf86|NS4EA|NSE4A NSE4 homolog A, SMC5-SMC6 complex component protein-coding chr13-1997 chr13 30880346 30880556 + 11.8 0.000 Intergenic Intergenic -2111 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr21-187 chr21 39388535 39388745 + 11.8 0.000 intron (NM_001146218, intron 1 of 4) intron (NM_001146218, intron 1 of 4) 877 NR_146616 7485 Hs.198308 NM_004627 ENSG00000182093 GET1 CHD5|WRB guided entry of tail-anchored proteins factor 1 protein-coding chr6-2958 chr6 36465644 36465854 + 11.8 0.000 intron (NR_104481, intron 1 of 3) intron (NR_104481, intron 1 of 3) 22749 NM_001286579 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr19-1175 chr19 9950050 9950260 + 11.8 0.000 Intergenic AluJr|SINE|Alu -13640 NM_058164 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr1-12222 chr1 208715536 208715746 + 11.8 0.000 Intergenic Intergenic -13047 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr16-3363 chr16 50473682 50473892 + 11.8 0.000 Intergenic Intergenic -74609 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr3-7012 chr3 171089013 171089223 + 11.8 0.000 intron (NM_001161563, intron 22 of 31) intron (NM_001161563, intron 22 of 31) 17641 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr16-3045 chr16 54785647 54785857 + 11.8 0.000 Intergenic HAL1M8|LINE|L1 62481 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr3-9697 chr3 65342282 65342492 + 11.8 0.000 Intergenic Intergenic -551429 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr9-4522 chr9 72332414 72332624 + 11.8 0.000 intron (NR_110952, intron 3 of 4) intron (NR_110952, intron 3 of 4) 27083 NR_110952 100507540 Hs.54957 NR_110952 ENSG00000225434 LINC01504 - long intergenic non-protein coding RNA 1504 ncRNA chr3-3987 chr3 56517129 56517339 + 11.8 0.000 Intergenic L1ME4b|LINE|L1 -39922 NR_148373 285331 Hs.476399 NM_001012506 ENSG00000180376 CCDC66 - coiled-coil domain containing 66 protein-coding chr11-2748 chr11 46394337 46394547 + 11.8 0.000 Intergenic MIRb|SINE|MIR -2774 NM_001366692 1132 Hs.248100 NM_000741 ENSG00000180720 CHRM4 HM4|M4R cholinergic receptor muscarinic 4 protein-coding chr2-3811 chr2 25036474 25036684 + 11.8 0.000 non-coding (NR_034113, exon 3 of 3) non-coding (NR_034113, exon 3 of 3) -5497 NM_014971 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr5-2237 chr5 10556376 10556586 + 11.8 0.000 Intergenic Intergenic -7589 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr17-5717 chr17 57082885 57083095 + 11.8 0.000 Intergenic L2a|LINE|L2 -2256 NM_003488 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr19-3686 chr19 16958651 16958861 + 11.8 0.000 intron (NM_015692, intron 18 of 41) L1PREC2|LINE|L1 -61809 NR_147452 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr1-5447 chr1 44849714 44849924 + 11.8 0.000 TTS (NM_020365) TTS (NM_020365) -6566 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr6-1874 chr6 73691612 73691822 + 11.8 0.000 Intergenic MLT2F|LTR|ERVL -4368 NM_001159587 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr3-2747 chr3 137104575 137104785 + 11.8 0.000 Intergenic Intergenic 146697 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chrX-1051 chrX 119150935 119151145 + 11.8 0.000 promoter-TSS (NM_020721) promoter-TSS (NM_020721) -461 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr3-4464 chr3 46702800 46703010 + 11.8 0.000 intron (NM_147196, intron 1 of 3) intron (NM_147196, intron 1 of 3) 1572 NM_147196 259236 Hs.185777 NM_147196 ENSG00000181585 TMIE DFNB6 transmembrane inner ear protein-coding chr10-1587 chr10 24718373 24718583 + 11.8 0.000 intron (NM_001367447, intron 2 of 24) L2b|LINE|L2 4270 NM_001367454 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr2-9156 chr2 211795227 211795437 + 11.8 0.000 intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 631028 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr6-2914 chr6 16295171 16295381 + 11.8 0.000 3' UTR (NM_006877, exon 9 of 9) 3' UTR (NM_006877, exon 9 of 9) 56689 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr1-4420 chr1 215082573 215082783 + 11.8 0.000 promoter-TSS (NM_001017425) promoter-TSS (NM_001017425) -59 NM_014217 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr5-2899 chr5 120683760 120683970 + 11.8 0.000 intron (NM_001308088, intron 3 of 3) L2b|LINE|L2 152401 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr9-2137 chr9 111945275 111945485 + 11.8 0.000 Intergenic Intergenic 13280 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr3-3819 chr3 22713952 22714162 + 11.8 0.000 Intergenic MER44B|DNA|TcMar-Tigger 488521 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr11-6827 chr11 95095910 95096120 + 11.8 0.000 intron (NM_015036, intron 1 of 1) intron (NM_015036, intron 1 of 1) 6169 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding chr4-2373 chr4 8499917 8500127 + 11.8 0.000 Intergenic AluJr4|SINE|Alu 59225 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr3-6221 chr3 65185123 65185333 + 11.8 0.000 Intergenic L2c|LINE|L2 -497228 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr1-2184 chr1 46179539 46179749 + 11.8 0.000 intron (NM_005727, intron 1 of 8) intron (NM_005727, intron 1 of 8) -3156 NM_001303427 110117499 Hs.655387 NM_001303427 ENSG00000278139 LOC110117498-PIK3R3 - LOC110117498-PIK3R3 readthrough protein-coding chr12-6466 chr12 96708164 96708374 + 11.8 0.000 intron (NM_001306084, intron 47 of 67) intron (NM_001306084, intron 47 of 67) -198988 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr8-590 chr8 143995789 143995999 + 11.8 0.000 Intergenic MER90a|LTR|ERV1 5836 NM_000837 2907 Hs.594634 NM_000837 ENSG00000178719 GRINA HNRGW|LFG1|NMDARA1|TMBIM3 glutamate ionotropic receptor NMDA type subunit associated protein 1 protein-coding chr2-2480 chr2 128317562 128317772 + 11.8 0.000 intron (NM_004807, intron 1 of 1) CpG 1201 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr11-4648 chr11 44386486 44386696 + 11.8 0.000 Intergenic L2a|LINE|L2 -76452 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr20-2041 chr20 2678893 2679103 + 11.8 0.000 Intergenic LTR40c|LTR|ERVL -13782 NR_138537 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr1-6379 chr1 9361481 9361691 + 11.8 0.000 intron (NM_025106, intron 2 of 2) intron (NM_025106, intron 2 of 2) 67330 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr6-3605 chr6 97504321 97504531 + 11.8 0.000 intron (NR_110757, intron 1 of 4) intron (NR_110757, intron 1 of 4) 198840 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr17-5236 chr17 17516707 17516917 + 11.8 0.000 intron (NM_148173, intron 3 of 6) intron (NM_148173, intron 3 of 6) -20417 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr3-2097 chr3 37031409 37031619 + 11.8 0.000 intron (NM_001167617, intron 13 of 18) intron (NM_001167617, intron 13 of 18) 38164 NM_001354626 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding chr1-6728 chr1 64039448 64039658 + 11.8 0.000 intron (NM_005012, intron 2 of 8) intron (NM_005012, intron 2 of 8) 72652 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr20-1306 chr20 58907822 58908032 + 11.8 0.000 intron (NM_080425, intron 6 of 12) intron (NM_080425, intron 6 of 12) 15764 NR_132272 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|PITA3|POH|SCG6|SgVI GNAS complex locus protein-coding chr4-2778 chr4 17771297 17771507 + 11.8 0.000 intron (NM_015688, intron 1 of 17) intron (NM_015688, intron 1 of 17) 10219 NM_015688 27146 Hs.744951 NM_015688 ENSG00000047662 FAM184B - family with sequence similarity 184 member B protein-coding chr14-792 chr14 69008677 69008887 + 11.8 0.000 Intergenic L1MEd|LINE|L1 29100 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr4-851 chr4 46538091 46538301 + 11.8 0.000 Intergenic Intergenic -148068 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr6-4910 chr6 96732246 96732456 + 11.8 0.000 Intergenic Intergenic 105126 NM_001143957 81491 Hs.221364 NM_030784 ENSG00000112218 GPR63 PSP24(beta)|PSP24B G protein-coupled receptor 63 protein-coding chr8-2710 chr8 98069552 98069762 + 11.8 0.000 intron (NM_001170806, intron 1 of 1) L1ME4b|LINE|L1 5089 NM_173549 203111 Hs.171455 NM_173549 ENSG00000177459 ERICH5 C8orf47 glutamate rich 5 protein-coding chr4-2417 chr4 107519106 107519316 + 11.8 0.000 Intergenic Intergenic 201023 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr16-1334 chr16 53052675 53052885 + 11.8 0.000 promoter-TSS (NR_136518) promoter-TSS (NR_136518) 93 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr1-3455 chr1 31772283 31772493 + 11.8 0.000 Intergenic CpG -8048 NM_001294335 576 Hs.524138 NM_001294335 ENSG00000121753 ADGRB2 BAI2 adhesion G protein-coupled receptor B2 protein-coding chr17-3669 chr17 8673877 8674087 + 11.8 0.000 Intergenic MIRc|SINE|MIR -43221 NM_001256095 4628 Hs.16355 NM_005964 ENSG00000133026 MYH10 NMMHC-IIB|NMMHCB myosin heavy chain 10 protein-coding chr4-1165 chr4 185204111 185204321 + 11.8 0.000 promoter-TSS (NM_001317781) promoter-TSS (NM_001317781) -21 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr16-1882 chr16 84934366 84934576 + 11.8 0.000 Intergenic Intergenic 77064 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr10-4869 chr10 16229192 16229402 + 11.8 0.000 Intergenic Intergenic -207646 NM_001261836 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr7-2122 chr7 30799854 30800064 + 11.8 0.000 intron (NR_037598, intron 7 of 19) LTR16A1|LTR|ERVL 28542 NM_032222 84182 Hs.660192 NM_032222 ENSG00000106125 MINDY4 AQP-1|AQP1|C7orf67|CHIP28|FAM188B MINDY lysine 48 deubiquitinase 4 protein-coding chr5-6420 chr5 152727573 152727783 + 11.8 0.000 intron (NR_109877, intron 3 of 4) MER57A-int|LTR|ERV1 244671 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr12-5358 chr12 118165183 118165393 + 11.8 0.000 intron (NM_001346490, intron 18 of 21) intron (NM_001346490, intron 18 of 21) 25247 NM_001346497 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr5-2521 chr5 159268417 159268627 + 11.8 0.000 intron (NM_145049, intron 1 of 10) intron (NM_145049, intron 1 of 10) 5232 NM_145049 134510 Hs.591733 NM_145049 ENSG00000164332 UBLCP1 CPUB1 ubiquitin like domain containing CTD phosphatase 1 protein-coding chr15-3323 chr15 79640012 79640222 + 11.8 0.000 Intergenic Intergenic 207601 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr2-3641 chr2 142615505 142615715 + 11.8 0.000 Intergenic L1PA10|LINE|L1 -262054 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr11-3066 chr11 12151279 12151489 + 11.8 0.000 intron (NR_144417, intron 2 of 26) intron (NR_144417, intron 2 of 26) -10695 NM_001282666 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr2-2849 chr2 150211092 150211302 + 11.8 0.000 Intergenic Intergenic 45810 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr16-2618 chr16 2317083 2317293 + 11.8 0.000 intron (NM_001089, intron 10 of 32) intron (NM_001089, intron 10 of 32) 23540 NM_001089 21 Hs.26630 NM_001089 ENSG00000167972 ABCA3 ABC-C|ABC3|EST111653|LBM180|SMDP3 ATP binding cassette subfamily A member 3 protein-coding chrX-1275 chrX 109714403 109714613 + 11.8 0.000 intron (NM_004458, intron 1 of 15) Tigger3|DNA|TcMar-Tigger -18003 NR_158569 105373311 Hs.268785 NR_158569 LOC105373311 - uncharacterized LOC105373311 ncRNA chr8-1964 chr8 61789996 61790206 + 11.8 0.000 Intergenic Intergenic 75313 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr11-3263 chr11 74755093 74755303 + 11.8 0.000 intron (NM_001098638, intron 1 of 5) intron (NM_001098638, intron 1 of 5) 6349 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr1-4854 chr1 28730752 28730962 + 11.8 0.000 Intergenic Intergenic -5764 NM_001173128 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr10-3442 chr10 45710198 45710408 + 11.8 0.000 Intergenic Intergenic -16740 NM_001367393 253725 Hs.365286 NM_015262 ENSG00000172661 WASHC2C FAM21A|FAM21C|VPEF WASH complex subunit 2C protein-coding chr10-2496 chr10 34549843 34550053 + 11.8 0.000 intron (NM_001184789, intron 2 of 22) intron (NM_001184789, intron 2 of 22) 265348 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr1-7113 chr1 201625384 201625594 + 11.8 0.000 Intergenic Intergenic -22833 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr6-4250 chr6 7607540 7607750 + 11.8 0.000 intron (NM_152551, intron 8 of 8) L2c|LINE|L2 17447 NM_152551 154007 Hs.13366 NM_152551 ENSG00000168566 SNRNP48 C6orf151|dJ336K20B.1|dJ512B11.2 small nuclear ribonucleoprotein U11/U12 subunit 48 protein-coding chr1-4947 chr1 52071586 52071796 + 11.8 0.000 intron (NM_001243767, intron 3 of 4) intron (NM_001243767, intron 3 of 4) 15396 NM_152265 91408 Hs.429839 NM_152265 ENSG00000134717 BTF3L4 - basic transcription factor 3 like 4 protein-coding chr2-9257 chr2 219682041 219682251 + 11.8 0.000 Intergenic MER70B|LTR|ERVL 54516 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr19-1643 chr19 10286318 10286528 + 11.8 0.000 promoter-TSS (NM_001544) promoter-TSS (NM_001544) -532 NM_001039132 3386 Hs.706750 NM_001544 ENSG00000105371 ICAM4 CD242|LW intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) protein-coding chr17-2917 chr17 44941618 44941828 + 11.8 0.000 intron (NM_001265577, intron 1 of 15) intron (NM_001265577, intron 1 of 15) 6050 NM_001265577 146909 Hs.135094 NM_001080443 ENSG00000186185 KIF18B - kinesin family member 18B protein-coding chr11-10658 chr11 127261057 127261267 + 11.8 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -9908 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr15-4765 chr15 70082938 70083148 + 11.8 0.000 intron (NM_020908, intron 4 of 19) intron (NM_020908, intron 4 of 19) -3575 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr1-4005 chr1 170686648 170686858 + 11.8 0.000 intron (NM_022716, intron 1 of 3) intron (NM_022716, intron 1 of 3) 22622 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr4-1721 chr4 186554928 186555138 + 11.8 0.000 intron (NM_005958, intron 1 of 1) intron (NM_005958, intron 1 of 1) 534 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr5-2412 chr5 111530400 111530610 + 11.8 0.000 intron (NR_040093, intron 1 of 6) intron (NR_040093, intron 1 of 6) -17908 NR_131752 134429 Hs.93842 NM_139164 ENSG00000164211 STARD4 - StAR related lipid transfer domain containing 4 protein-coding chr16-4066 chr16 1796467 1796677 + 11.8 0.000 Intergenic THE1C|LTR|ERVL-MaLR -1664 NR_027389 3483 Hs.839 NM_004970 ENSG00000099769 IGFALS ACLSD|ALS insulin like growth factor binding protein acid labile subunit protein-coding chr1-5096 chr1 115595784 115595994 + 11.8 0.000 Intergenic Intergenic -46081 NM_001172411 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr10-4269 chr10 1266550 1266760 + 11.8 0.000 intron (NM_018702, intron 4 of 9) intron (NM_018702, intron 4 of 9) 106887 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr18-1116 chr18 77065465 77065675 + 11.8 0.000 intron (NM_001025100, intron 3 of 3) intron (NM_001025100, intron 3 of 3) -48515 NM_001025090 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr21-700 chr21 29044041 29044251 + 11.8 0.000 intron (NM_001032410, intron 14 of 18) AluSz|SINE|Alu 19478 NM_006447 10600 Hs.99819 NM_006447 ENSG00000156256 USP16 UBP-M|UBPM ubiquitin specific peptidase 16 protein-coding chr12-1817 chr12 8066516 8066726 + 11.8 0.000 promoter-TSS (NM_001326475) promoter-TSS (NM_001326475) -262 NM_001326477 719 Hs.504656 NM_004054 ENSG00000171860 C3AR1 AZ3B|C3AR|HNFAG09 complement C3a receptor 1 protein-coding chr18-975 chr18 75922359 75922569 + 11.8 0.000 Intergenic MIR|SINE|MIR -200534 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA chr1-6163 chr1 184363016 184363226 + 11.8 0.000 Intergenic Intergenic -23908 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr5-3770 chr5 63087976 63088186 + 11.8 0.000 Intergenic Intergenic 509262 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr2-8992 chr2 192773724 192773934 + 11.8 0.000 intron (NR_152587, intron 3 of 3) intron (NR_152587, intron 3 of 3) 23984 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr15-2198 chr15 89813009 89813219 + 11.8 0.000 intron (NM_001150, intron 1 of 20) intron (NM_001150, intron 1 of 20) 1738 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr17-4716 chr17 31890500 31890710 + 11.8 0.000 intron (NM_018428, intron 6 of 18) AluSz|SINE|Alu 11103 NM_018428 55813 Hs.589862 NM_018428 ENSG00000108651 UTP6 C17orf40|HCA66 UTP6 small subunit processome component protein-coding chr18-826 chr18 8943113 8943323 + 11.8 0.000 Intergenic Intergenic -159481 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr6-4206 chr6 3801160 3801370 + 11.8 0.000 Intergenic Intergenic -48108 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr1-9980 chr1 81682523 81682733 + 11.8 0.000 intron (NM_001366008, intron 3 of 26) intron (NM_001366008, intron 3 of 26) -17142 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr10-3241 chr10 114623828 114624038 + 11.8 0.000 intron (NM_001322886, intron 1 of 20) intron (NM_001322886, intron 1 of 20) 8464 NM_001352441 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr5-1497 chr5 125717173 125717383 + 11.8 0.000 Intergenic LTR33|LTR|ERVL 224017 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr3-8924 chr3 13331428 13331638 + 11.8 0.000 intron (NM_024923, intron 29 of 39) L2c|LINE|L2 88789 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr1-11166 chr1 238487945 238488155 + 11.8 0.000 Intergenic Intergenic -2033 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr8-3309 chr8 28606196 28606406 + 11.8 0.000 Intergenic L1MB3|LINE|L1 95163 NR_126027 101929402 Hs.667366 NR_126027 ENSG00000246339 EXTL3-AS1 C8orf50 EXTL3 antisense RNA 1 ncRNA chr18-1282 chr18 60212970 60213180 + 11.8 0.000 Intergenic Intergenic 159700 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr16-3614 chr16 83588149 83588359 + 11.8 0.000 intron (NM_001220489, intron 6 of 12) intron (NM_001220489, intron 6 of 12) 79908 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr11-3269 chr11 75779637 75779847 + 11.8 0.000 intron (NM_001253891, intron 1 of 6) intron (NM_001253891, intron 1 of 6) 10964 NM_032564 84649 Hs.129798 NM_032564 ENSG00000062282 DGAT2 ARAT|GS1999FULL|HMFN1045 diacylglycerol O-acyltransferase 2 protein-coding chr6-6871 chr6 10431432 10431642 + 11.8 0.000 intron (NR_027793, intron 2 of 2) MIR3|SINE|MIR -2792 NR_132993 106660610 Hs.575376 NR_132993 ENSG00000229401 MIR5689HG - MIR5689 host gene ncRNA chr16-2243 chr16 322114 322324 + 11.8 0.000 intron (NM_003502, intron 2 of 10) intron (NM_003502, intron 2 of 10) 30504 NR_134879 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr10-5626 chr10 95626581 95626791 + 11.8 0.000 intron (NM_001323414, intron 10 of 17) intron (NM_001323414, intron 10 of 17) 30025 NM_001323417 5832 Hs.500645 NM_002860 ENSG00000059573 ALDH18A1 ADCL3|ARCL3A|GSAS|P5CS|PYCS|SPG9|SPG9A|SPG9B aldehyde dehydrogenase 18 family member A1 protein-coding chr4-4483 chr4 56845053 56845263 + 11.8 0.000 Intergenic Intergenic -23289 NM_021114 6691 Hs.98243 NM_021114 ENSG00000128040 SPINK2 HUSI-II|SPGF29 serine peptidase inhibitor, Kazal type 2 protein-coding chr7-2527 chr7 54589925 54590135 + 11.8 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 33060 NR_038994 285878 Hs.335933 NR_038994 ENSG00000224223 VSTM2A-OT1 GS1-18A18.1 VSTM2A overlapping transcript 1 ncRNA chr5-2518 chr5 158304462 158304672 + 11.8 0.000 Intergenic Intergenic 105206 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr12-1929 chr12 100593459 100593669 + 11.8 0.000 promoter-TSS (NM_001303131) promoter-TSS (NM_001303131) -54 NM_001303131 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr19-2067 chr19 13633087 13633297 + 11.8 0.000 Intergenic Intergenic -98560 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr7-2688 chr7 20444082 20444292 + 11.8 0.000 Intergenic L2a|LINE|L2 -112425 NR_110120 101927811 Hs.285724 NR_110119 ENSG00000271133 LOC101927811 - uncharacterized LOC101927811 ncRNA chr2-3662 chr2 172439350 172439560 + 11.8 0.000 intron (NM_001365530, intron 1 of 25) intron (NM_001365530, intron 1 of 25) 11869 NM_001365530 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr20-1619 chr20 14235351 14235561 + 11.8 0.000 intron (NM_001351663, intron 3 of 17) MIR|SINE|MIR 102156 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr2-4188 chr2 192195907 192196117 + 11.8 0.000 Intergenic CpG-16870 -1079 NM_001305134 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr4-5173 chr4 157588401 157588611 + 11.8 0.000 Intergenic MSTB|LTR|ERVL-MaLR 16016 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr5-3002 chr5 5385324 5385534 + 11.8 0.000 Intergenic Intergenic -37248 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr18-904 chr18 58135295 58135505 + 11.8 0.000 intron (NM_001144964, intron 1 of 30) intron (NM_001144964, intron 1 of 30) -13920 NM_001144969 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr4-2730 chr4 6417206 6417416 + 11.8 0.000 intron (NM_001206996, intron 1 of 9) intron (NM_001206996, intron 1 of 9) 3807 NM_001206996 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr10-1436 chr10 43965384 43965594 + 11.8 0.000 non-coding (NR_033846, exon 6 of 8) non-coding (NR_033846, exon 6 of 8) 53087 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr1-4145 chr1 6346395 6346605 + 11.8 0.000 intron (NM_181866, intron 2 of 8) L2a|LINE|L2 12429 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr15-2630 chr15 68900370 68900580 + 11.8 0.000 Intergenic Intergenic -30025 NR_033672 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr2-6124 chr2 218956272 218956482 + 11.8 0.000 Intergenic MIR3|SINE|MIR -3289 NM_003936 8941 Hs.158460 NM_003936 ENSG00000171450 CDK5R2 NCK5AI|P39|p39nck5ai cyclin dependent kinase 5 regulatory subunit 2 protein-coding chr15-608 chr15 68209769 68209979 + 11.8 0.000 intron (NM_017882, intron 5 of 6) intron (NM_017882, intron 5 of 6) -3764 NR_104583 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr3-1690 chr3 27219420 27219630 + 11.8 0.000 intron (NM_199347, intron 24 of 24) MER67C|LTR|ERV1 -3002 NM_001304384 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr9-1828 chr9 130545927 130546137 + 11.8 0.000 Intergenic MSTD|LTR|ERVL-MaLR 33462 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr1-9626 chr1 46328429 46328639 + 11.8 0.000 Intergenic Harlequin-int|LTR|ERV1 -11643 NR_045790 387338 Hs.163424 NM_199044 ENSG00000117481 NSUN4 SHTAP NOP2/Sun RNA methyltransferase 4 protein-coding chr19-1521 chr19 2749228 2749438 + 11.8 0.000 Intergenic Intergenic -9257 NM_213568 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr3-6843 chr3 149132354 149132564 + 11.8 0.000 intron (NM_001308258, intron 1 of 15) Tigger1|DNA|TcMar-Tigger 2821 NM_001308258 84343 Hs.558314 NM_032383 ENSG00000163755 HPS3 BLOC2S1|SUTAL HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 protein-coding chr17-5974 chr17 77214800 77215010 + 11.8 0.000 3' UTR (NM_001143998, exon 17 of 17) 3' UTR (NM_001143998, exon 17 of 17) 29692 NM_001144001 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr15-774 chr15 38894555 38894765 + 11.8 0.000 Intergenic L2c|LINE|L2 198062 NR_160786 chr13-1253 chr13 102317717 102317927 + 11.8 0.000 promoter-TSS (NM_001321935) promoter-TSS (NM_001321935) -118 NM_001321936 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr19-1593 chr19 12696567 12696777 + 11.8 0.000 promoter-TSS (NM_032301) promoter-TSS (NM_032301) -41 NM_032301 84261 Hs.515154 NM_032301 ENSG00000132004 FBXW9 Fbw9|MEC-15 F-box and WD repeat domain containing 9 protein-coding chr12-4047 chr12 49400427 49400637 + 11.8 0.000 intron (NM_001293285, intron 3 of 14) L2a|LINE|L2 11358 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr22-2168 chr22 43350805 43351015 + 11.8 0.000 Intergenic AluSp|SINE|Alu -7538 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr4-4177 chr4 10023941 10024151 + 11.8 0.000 intron (NM_001001290, intron 2 of 12) intron (NM_001001290, intron 2 of 12) -2549 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr6-4838 chr6 84688541 84688751 + 11.8 0.000 promoter-TSS (NR_125875) promoter-TSS (NR_125875) -812 NR_125875 102724201 Hs.667523 NR_125875 ENSG00000228290 TBX18-AS1 - TBX18 antisense RNA 1 ncRNA chr11-6032 chr11 26725355 26725565 + 11.8 0.000 Intergenic Intergenic -3400 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr6-3552 chr6 44452790 44453000 + 11.8 0.000 Intergenic MER44D|DNA|TcMar-Tigger 17254 NR_039785 100616352 NR_039785 ENSG00000266619 MIR4642 - microRNA 4642 ncRNA chr2-9019 chr2 196927972 196928182 + 11.8 0.000 Intergenic Intergenic -1370 NM_001321100 80055 Hs.229988 NM_024989 ENSG00000197121 PGAP1 Bst1|ISPD3024|MRT42|SPG67 post-GPI attachment to proteins 1 protein-coding chr8-6158 chr8 31979268 31979478 + 11.8 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -46363 NR_104158 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr20-1177 chr20 1400216 1400426 + 11.8 0.000 Intergenic HERVK3-int|LTR|ERVK -7149 NR_037661 100528031 Hs.471933 NR_037661 FKBP1A-SDCBP2 - FKBP1A-SDCBP2 readthrough (NMD candidate) ncRNA chr2-4046 chr2 111455751 111455961 + 11.8 0.000 intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 39305 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr11-4049 chr11 12968975 12969185 + 11.8 0.000 Intergenic Intergenic 20468 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr19-3739 chr19 46070223 46070433 + 11.8 0.000 intron (NR_163177, intron 1 of 5) intron (NR_163177, intron 1 of 5) 7301 NR_163176 444882 Hs.531310 NM_001002923 ENSG00000204869 IGFL4 - IGF like family member 4 protein-coding chr4-3190 chr4 8142244 8142454 + 11.8 0.000 intron (NM_001130084, intron 1 of 19) intron (NM_001130084, intron 1 of 19) 16464 NM_001130085 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr6-2276 chr6 74879195 74879405 + 11.8 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 249482 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr4-2228 chr4 146333652 146333862 + 11.8 0.000 intron (NM_001317816, intron 4 of 10) L2b|LINE|L2 -74826 NR_107003 102465837 NR_107003 ENSG00000278438 MIR7849 hsa-mir-7849 microRNA 7849 ncRNA chr1-4435 chr1 231106212 231106422 + 11.8 0.000 Intergenic Intergenic -56611 NM_001004342 440730 Hs.655089 NM_001004342 ENSG00000119283 TRIM67 TNL tripartite motif containing 67 protein-coding chr10-8993 chr10 120816650 120816860 + 11.8 0.000 intron (NR_033850, intron 1 of 2) Charlie1a|DNA|hAT-Charlie 34424 NR_033850 283089 Hs.568750 NR_033850 ENSG00000227165 WDR11-AS1 - WDR11 antisense RNA 1 ncRNA chrX-1709 chrX 19203692 19203902 + 11.8 0.000 Intergenic Intergenic -81160 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr1-2982 chr1 171141662 171141872 + 11.8 0.000 intron (NR_002601, intron 1 of 6) intron (NR_002601, intron 1 of 6) 4027 NR_002601 388714 Hs.448988 NR_002601 ENSG00000117507 FMO6P FMO6 flavin containing dimethylaniline monoxygenase 6, pseudogene pseudo chr12-1011 chr12 6914554 6914764 + 11.8 0.000 promoter-TSS (NM_001975) promoter-TSS (NM_001975) 79 NM_001975 2026 Hs.511915 NM_001975 ENSG00000111674 ENO2 HEL-S-279|NSE enolase 2 protein-coding chr2-5208 chr2 43998269 43998479 + 11.8 0.000 Intergenic L2a|LINE|L2 -2385 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr1-4655 chr1 201221419 201221629 + 11.8 0.000 exon (NM_001367841, exon 20 of 25) exon (NM_001367841, exon 20 of 25) 30699 NM_001164586 91156 Hs.519024 NM_178275 ENSG00000163395 IGFN1 EEF1A2BP1 immunoglobulin like and fibronectin type III domain containing 1 protein-coding chr4-7977 chr4 113434197 113434407 + 11.8 0.000 Intergenic MER110|LTR|ERV1 141463 NM_001354279 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr3-3094 chr3 138008625 138008835 + 11.8 0.000 intron (NM_001002026, intron 1 of 4) AluSz|SINE|Alu -1435 NM_016369 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr20-2767 chr20 51725711 51725921 + 11.8 0.000 intron (NM_006045, intron 3 of 27) intron (NM_006045, intron 3 of 27) 42574 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr2-4222 chr2 216989999 216990209 + 11.8 0.000 Intergenic Intergenic 119332 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr17-3462 chr17 41762722 41762932 + 11.8 0.000 intron (NM_001352776, intron 9 of 15) MLT1J|LTR|ERVL-MaLR 23268 NM_001352777 3728 Hs.514174 NM_002230 ENSG00000173801 JUP CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr1-7362 chr1 19406004 19406214 + 11.8 0.000 intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 78186 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr4-4771 chr4 99651039 99651249 + 11.8 0.000 exon (NM_001354435, exon 1 of 2) exon (NM_001354435, exon 1 of 2) 3535 NM_001354435 285556 Hs.480371 NM_001354435 ENSG00000248713 C4orf54 FOPV chromosome 4 open reading frame 54 protein-coding chr8-3704 chr8 19141071 19141281 + 11.8 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 104346 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr10-2761 chr10 123041746 123041956 + 11.8 0.000 intron (NM_001609, intron 5 of 10) MER2B|DNA|TcMar-Tigger 32845 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chr9-5374 chr9 91701838 91702048 + 11.8 0.000 Intergenic L1MA9|LINE|L1 -65598 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr10-5838 chr10 112966432 112966642 + 11.8 0.000 intron (NM_001367943, intron 4 of 14) intron (NM_001367943, intron 4 of 14) 16287 NM_001198530 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr12-3440 chr12 111812150 111812360 + 11.8 0.000 3' UTR (NM_001204889, exon 12 of 12) 3' UTR (NM_001204889, exon 12 of 12) 12421 NR_106819 102465456 NR_106819 ENSG00000274697 MIR6761 hsa-mir-6761 microRNA 6761 ncRNA chrX-311 chrX 70290025 70290235 + 11.8 0.000 promoter-TSS (NM_012310) promoter-TSS (NM_012310) 26 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chr8-3752 chr8 22944790 22945000 + 11.8 0.000 Intergenic Intergenic -3818 NM_001363233 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr17-2827 chr17 17067376 17067586 + 11.8 0.000 intron (NM_201274, intron 1 of 23) MER44C|DNA|TcMar-Tigger 24721 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr15-2303 chr15 71811500 71811710 + 11.8 0.000 exon (NM_016346, exon 2 of 7) exon (NM_016346, exon 2 of 7) 1051 NM_014249 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding chr4-4456 chr4 54335991 54336201 + 11.8 0.000 intron (NR_147160, intron 1 of 1) intron (NR_147160, intron 1 of 1) 3204 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr10-5001 chr10 32238153 32238363 + 11.8 0.000 Intergenic HERV16-int|LTR|ERVL 108900 NM_001272004 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr21-139 chr21 33229870 33230080 + 11.8 0.000 promoter-TSS (NM_001289126) promoter-TSS (NM_001289126) 37 NM_000874 3455 Hs.708195 NM_000874 ENSG00000159110 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB|IMD45 interferon alpha and beta receptor subunit 2 protein-coding chr4-1263 chr4 25843816 25844026 + 11.8 0.000 intron (NM_001297592, intron 2 of 23) intron (NM_001297592, intron 2 of 23) 19067 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding chr9-8417 chr9 120867084 120867294 + 11.8 0.000 intron (NM_015651, intron 6 of 14) MIRb|SINE|MIR 1722 NM_001286842 26147 Hs.460124 NM_015651 ENSG00000119403 PHF19 MTF2L1|PCL3|TDRD19B PHD finger protein 19 protein-coding chr2-9821 chr2 148447886 148448096 + 11.8 0.000 intron (NM_018328, intron 5 of 14) intron (NM_018328, intron 5 of 14) -196760 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr4-4453 chr4 54288794 54289004 + 11.8 0.000 intron (NM_001347829, intron 20 of 22) intron (NM_001347829, intron 20 of 22) -43993 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr5-2537 chr5 169856718 169856928 + 11.8 0.000 intron (NR_156756, intron 27 of 52) intron (NR_156756, intron 27 of 52) 123672 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr9-5981 chr9 134593068 134593278 + 11.8 0.000 Intergenic Intergenic -48632 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr15-2350 chr15 35710601 35710811 + 11.8 0.000 intron (NR_038251, intron 1 of 2) intron (NR_038251, intron 1 of 2) 164511 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr6-2471 chr6 42143047 42143257 + 11.8 0.000 promoter-TSS (NM_001164446) promoter-TSS (NM_001164446) -532 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr15-1104 chr15 74783133 74783343 + 11.8 0.000 intron (NM_004383, intron 1 of 12) intron (NM_004383, intron 1 of 12) 1154 NM_004383 1445 Hs.77793 NM_004383 ENSG00000103653 CSK - C-terminal Src kinase protein-coding chr5-1372 chr5 73625692 73625902 + 11.8 0.000 promoter-TSS (NM_001080479) promoter-TSS (NM_001080479) -361 NM_001080479 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr11-1354 chr11 57335410 57335620 + 11.8 0.000 intron (NM_003146, intron 1 of 16) CpG 377 NM_003146 6749 Hs.523680 NM_003146 ENSG00000149136 SSRP1 FACT|FACT80|T160 structure specific recognition protein 1 protein-coding chr16-3143 chr16 74577897 74578107 + 11.8 0.000 intron (NR_027264, intron 1 of 26) AluJr|SINE|Alu 29112 NM_012201 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr22-1344 chr22 22028674 22028884 + 11.8 0.000 intron (NR_135291, intron 1 of 6) AluJo|SINE|Alu 15155 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr14-1565 chr14 72736398 72736608 + 11.8 0.000 intron (NM_001280544, intron 3 of 9) intron (NM_001280544, intron 3 of 9) 156146 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr8-4247 chr8 91165340 91165550 + 11.8 0.000 intron (NR_148895, intron 7 of 10) intron (NR_148895, intron 7 of 10) -40040 NR_039805 100616245 NR_039805 ENSG00000266194 MIR4661 - microRNA 4661 ncRNA chr1-5631 chr1 21764933 21765143 + 11.8 0.000 intron (NM_001350167, intron 1 of 26) intron (NM_001350167, intron 1 of 26) 18111 NM_001350168 84196 Hs.467524 NM_032236 ENSG00000090686 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding chr10-5854 chr10 114128014 114128224 + 11.8 0.000 intron (NM_001321829, intron 14 of 16) MIR|SINE|MIR 46060 NR_031747 100302224 NR_031747 ENSG00000284442 MIR2110 hsa-mir-2110|mir-2110 microRNA 2110 ncRNA chr6-3761 chr6 14542761 14542971 + 11.8 0.000 Intergenic MIRb|SINE|MIR -257412 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr1-6700 chr1 54612732 54612942 + 11.8 0.000 intron (NM_176782, intron 4 of 7) intron (NM_176782, intron 4 of 7) 10688 NM_176782 338094 Hs.234786 NM_176782 ENSG00000162391 FAM151A C1orf179 family with sequence similarity 151 member A protein-coding chr4-4272 chr4 23884840 23885050 + 11.8 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -3653 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr10-4853 chr10 14505252 14505462 + 11.8 0.000 Intergenic Intergenic 27357 NM_001320741 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr20-2403 chr20 19288130 19288340 + 11.8 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -3639 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr8-1634 chr8 101805339 101805549 + 11.8 0.000 intron (NM_001040628, intron 4 of 7) L1M4b|LINE|L1 -14475 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr2-9502 chr2 236645820 236646030 + 11.8 0.000 Intergenic Intergenic 76100 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr20-1479 chr20 6387905 6388115 + 11.8 0.000 Intergenic Intergenic -38722 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr4-3529 chr4 160082512 160082722 + 11.8 0.000 Intergenic Intergenic -304833 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr2-6025 chr2 102803124 102803334 + 11.8 0.000 intron (NM_001321345, intron 4 of 4) MamSINE1|SINE|tRNA-RTE 41198 NM_144632 130827 Hs.436203 NM_144632 ENSG00000170417 TMEM182 - transmembrane protein 182 protein-coding chr6-2041 chr6 73798754 73798964 + 11.8 0.000 intron (NM_001159588, intron 22 of 31) intron (NM_001159588, intron 22 of 31) 102656 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr14-1531 chr14 58866210 58866420 + 11.8 0.000 intron (NR_110547, intron 1 of 5) intron (NR_110547, intron 1 of 5) 38027 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr4-2961 chr4 109846369 109846579 + 11.8 0.000 3' UTR (NM_006583, exon 7 of 7) 3' UTR (NM_006583, exon 7 of 7) -1633 NM_198506 345193 Hs.308127 NM_198506 ENSG00000183423 LRIT3 CSNB1F|FIGLER4 leucine rich repeat, Ig-like and transmembrane domains 3 protein-coding chr7-3219 chr7 149871936 149872146 + 11.8 0.000 promoter-TSS (NM_001367791) promoter-TSS (NM_001367791) -923 NM_001367792 155066 Hs.556998 NM_145230 ENSG00000171130 ATP6V0E2 ATP6V0E2L|C7orf32 ATPase H+ transporting V0 subunit e2 protein-coding chr16-2409 chr16 70800956 70801166 + 11.8 0.000 promoter-TSS (NM_018052) promoter-TSS (NM_018052) 97 NM_001351157 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|TAX1BP2|TRX VAC14 component of PIKFYVE complex protein-coding chr20-675 chr20 36128520 36128730 + 11.8 0.000 intron (NM_001258330, intron 3 of 20) intron (NM_001258330, intron 3 of 20) -26115 NM_012156 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr2-8210 chr2 95393781 95393991 + 11.8 0.000 Intergenic ERVL-E-int|LTR|ERVL -8822 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr12-3120 chr12 30305194 30305404 + 11.8 0.000 Intergenic Intergenic 371945 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr5-6963 chr5 142784351 142784561 + 11.8 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 13229 NM_001349547 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr12-3821 chr12 75993955 75994165 + 11.8 0.000 Intergenic Intergenic 37716 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr16-2570 chr16 81608859 81609069 + 11.8 0.000 intron (NM_030629, intron 2 of 20) intron (NM_030629, intron 2 of 20) -2384 NR_106759 102465251 NR_106759 ENSG00000275109 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA chr1-8370 chr1 67092139 67092349 + 11.8 0.000 TTS (NM_001276351) TTS (NM_001276351) -38096 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr7-5597 chr7 50203168 50203378 + 11.8 0.000 Intergenic Intergenic -100791 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr18-1752 chr18 8322901 8323111 + 11.8 0.000 intron (NM_002845, intron 20 of 30) AluJr|SINE|Alu 44028 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr18-892 chr18 48476001 48476211 + 11.8 0.000 Intergenic Intergenic -62925 NM_014772 9811 Hs.145230 NM_014772 ENSG00000134030 CTIF Gm672|KIAA0427 cap binding complex dependent translation initiation factor protein-coding chr3-8548 chr3 146241850 146242060 + 11.8 0.000 intron (NM_001128304, intron 2 of 10) MER57C2|LTR|ERV1 8660 NM_001128305 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr6-2262 chr6 61043122 61043332 + 11.8 0.000 Intergenic SATR1|Satellite|Satellite -530903 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr2-12729 chr2 81400760 81400970 + 11.8 0.000 Intergenic Intergenic 66081 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr8-2855 chr8 133536290 133536500 + 11.8 0.000 intron (NM_003033, intron 2 of 8) intron (NM_003033, intron 2 of 8) 35492 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr8-1517 chr8 75976955 75977165 + 11.8 0.000 Intergenic Intergenic -429594 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr2-7487 chr2 17549320 17549530 + 11.8 0.000 intron (NM_001366806, intron 1 of 3) intron (NM_001366806, intron 1 of 3) 8729 NM_003385 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr8-1470 chr8 22816549 22816759 + 11.8 0.000 intron (NM_001363233, intron 4 of 6) MIRc|SINE|MIR -61318 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr20-1221 chr20 23772278 23772488 + 11.8 0.000 Intergenic Intergenic -21446 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr4-5146 chr4 153640834 153641044 + 11.8 0.000 intron (NR_134873, intron 1 of 2) MER58D|DNA|hAT-Charlie 771 NR_134873 100419170 Hs.382102 NR_134873 ENSG00000250771 LOC100419170 - toll like receptor 2 pseudogene pseudo chr14-1547 chr14 64873826 64874036 + 11.8 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) 5976 NM_001355437 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr8-4677 chr8 138997596 138997806 + 11.8 0.000 Intergenic Intergenic -83660 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr1-5317 chr1 223298713 223298923 + 11.8 0.000 intron (NM_017982, intron 2 of 8) intron (NM_017982, intron 2 of 8) 65358 NM_001037175 55061 Hs.497841 NM_017982 ENSG00000143502 SUSD4 PRO222 sushi domain containing 4 protein-coding chr13-2871 chr13 110902861 110903071 + 11.8 0.000 intron (NR_104586, intron 3 of 4) intron (NR_104586, intron 3 of 4) 12103 NM_017664 55608 Hs.525163 NM_017664 ENSG00000088448 ANKRD10 - ankyrin repeat domain 10 protein-coding chr14-1779 chr14 101809632 101809842 + 11.8 0.000 promoter-TSS (NM_001352912) promoter-TSS (NM_001352912) -98 NM_002719 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr10-2048 chr10 89278141 89278351 + 11.8 0.000 Intergenic Intergenic -23800 NM_001547 3433 Hs.437609 NM_001547 ENSG00000119922 IFIT2 G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 interferon induced protein with tetratricopeptide repeats 2 protein-coding chr1-8677 chr1 213846868 213847078 + 11.8 0.000 intron (NR_037850, intron 4 of 5) intron (NR_037850, intron 4 of 5) -77776 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr10-2681 chr10 99708855 99709065 + 11.8 0.000 3' UTR (NM_001349963, exon 13 of 13) 3' UTR (NM_001349963, exon 13 of 13) -23274 NM_015960 51076 Hs.16606 NM_015960 ENSG00000119929 CUTC CGI-32 cutC copper transporter protein-coding chr2-4020 chr2 101479474 101479684 + 11.8 0.000 Intergenic Intergenic -4467 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr1-4080 chr1 218299453 218299663 + 11.8 0.000 intron (NM_016052, intron 1 of 4) intron (NM_016052, intron 1 of 4) 14265 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr6-1814 chr6 139292139 139292349 + 11.8 0.000 promoter-TSS (NM_153235) promoter-TSS (NM_153235) -246 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding chr7-6395 chr7 152987725 152987935 + 11.8 0.000 Intergenic L1MA9|LINE|L1 228078 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr13-445 chr13 44629967 44630177 + 11.8 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -10297 NR_149082 106144541 Hs.578031 NR_149082 LINC00407 - long intergenic non-protein coding RNA 407 ncRNA chr3-6503 chr3 112884342 112884552 + 11.8 0.000 Intergenic L1PA15|LINE|L1 -38497 NM_001008784 344807 Hs.531814 NM_001008784 ENSG00000206531 CD200R1L CD200R2|CD200RLa CD200 receptor 1 like protein-coding chr22-1183 chr22 45504629 45504839 + 11.8 0.000 intron (NM_006487, intron 1 of 14) intron (NM_006487, intron 1 of 14) 1851 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr14-2811 chr14 22839204 22839414 + 11.8 0.000 intron (NM_004995, intron 1 of 9) intron (NM_004995, intron 1 of 9) 2724 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr1-11045 chr1 223661953 223662163 + 11.8 0.000 intron (NM_001143962, intron 1 of 20) L1MB3|LINE|L1 3643 NM_001143962 388743 Hs.291487 NM_001143962 ENSG00000203697 CAPN8 nCL-2 calpain 8 protein-coding chr6-1317 chr6 12233803 12234013 + 11.8 0.000 Intergenic Intergenic -56453 NM_001168319 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr4-1622 chr4 73599275 73599485 + 11.8 0.000 intron (NM_001270391, intron 2 of 9) intron (NM_001270391, intron 2 of 9) 21056 NM_001270391 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding ML143377.1-5 ML143377.1 295158 295368 + 11.8 0.000 NA NA NA NA chr1-10761 chr1 200681301 200681511 + 11.8 0.000 intron (NR_110787, intron 1 of 2) L2c|LINE|L2 -11408 NM_001349804 83479 Hs.497332 NM_031306 ENSG00000118197 DDX59 OFD5|ZNHIT5 DEAD-box helicase 59 protein-coding chr2-2611 chr2 37283092 37283302 + 11.8 0.000 intron (NM_005813, intron 5 of 17) MER5A|DNA|hAT-Charlie 33887 NM_005813 23683 Hs.660757 NM_005813 ENSG00000115825 PRKD3 EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU protein kinase D3 protein-coding chr11-2617 chr11 6419300 6419510 + 11.8 0.000 promoter-TSS (NM_001164) promoter-TSS (NM_001164) 48 NM_145689 322 Hs.372840 NM_001164 ENSG00000166313 APBB1 FE65|MGC:9072|RIR amyloid beta precursor protein binding family B member 1 protein-coding chr5-2813 chr5 19940200 19940410 + 11.8 0.000 intron (NM_001349562, intron 2 of 13) L2a|LINE|L2 47895 NM_001349559 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr2-5051 chr2 694114 694324 + 11.8 0.000 Intergenic Intergenic -16813 NM_001352680 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr22-789 chr22 46749415 46749625 + 11.8 0.000 Intergenic Intergenic -11268 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr1-8151 chr1 14822229 14822439 + 11.8 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) -101795 NM_001018000 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr2-7206 chr2 217239866 217240076 + 11.8 0.000 Intergenic Intergenic -42762 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr16-2788 chr16 48336059 48336269 + 11.8 0.000 intron (NM_031490, intron 12 of 14) intron (NM_031490, intron 12 of 14) 29723 NM_001006610 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chrX-1059 chrX 124510303 124510513 + 11.8 0.000 intron (NM_014253, intron 18 of 30) intron (NM_014253, intron 18 of 30) 164126 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr1-4964 chr1 53766954 53767164 + 11.8 0.000 non-coding (NR_033142, exon 17 of 17) non-coding (NR_033142, exon 17 of 17) -27895 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr3-1074 chr3 100064380 100064590 + 11.7 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) 50028 NM_182909 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr7-2298 chr7 74355148 74355358 + 11.7 0.000 intron (NM_032421, intron 4 of 15) intron (NM_032421, intron 4 of 15) 65778 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr10-1959 chr10 24873353 24873563 + 11.7 0.000 intron (NM_020200, intron 3 of 8) intron (NM_020200, intron 3 of 8) 79148 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr18-1970 chr18 38409356 38409566 + 11.7 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 752326 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr16-6049 chr16 10686966 10687176 + 11.7 0.000 intron (NM_144674, intron 3 of 6) L1MA8|LINE|L1 7859 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr1-7505 chr1 151621394 151621604 + 11.7 0.000 intron (NM_030918, intron 1 of 11) intron (NM_030918, intron 1 of 11) 9449 NM_030918 81609 Hs.192326 NM_030918 ENSG00000143376 SNX27 MRT1|MY014 sorting nexin 27 protein-coding chr20-1154 chr20 50818358 50818568 + 11.7 0.000 intron (NM_017843, intron 2 of 5) (CT)n|Simple_repeat|Simple_repeat 23569 NM_017843 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr14-1993 chr14 51691255 51691465 + 11.7 0.000 intron (NM_001042481, intron 3 of 14) L1ME3|LINE|L1 -25923 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr8-1293 chr8 68760002 68760212 + 11.7 0.000 intron (NM_001349479, intron 9 of 11) L2c|LINE|L2 344083 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr1-4741 chr1 6414563 6414773 + 11.7 0.000 TTS (NM_019089) TTS (NM_019089) 5251 NM_019089 54626 Hs.118727 NM_019089 ENSG00000069812 HES2 bHLHb40 hes family bHLH transcription factor 2 protein-coding chr10-3348 chr10 14057107 14057317 + 11.7 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -17072 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr10-3828 chr10 133437790 133438000 + 11.7 0.000 Intergenic LTR13|LTR|ERVK -13278 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chrX-4052 chrX 18806473 18806683 + 11.7 0.000 intron (NM_152226, intron 14 of 17) intron (NM_152226, intron 14 of 17) -83718 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr10-3592 chr10 88851758 88851968 + 11.7 0.000 promoter-TSS (NM_144590) promoter-TSS (NM_144590) -19 NM_144590 118932 Hs.217484 NM_144590 ENSG00000152766 ANKRD22 - ankyrin repeat domain 22 protein-coding chr12-2596 chr12 120741738 120741948 + 11.7 0.000 Intergenic Intergenic 16017 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr14-2614 chr14 59524471 59524681 + 11.7 0.000 intron (NM_001164399, intron 16 of 19) L1ME3A|LINE|L1 40059 NM_016475 51528 Hs.446850 NM_016475 ENSG00000050130 JKAMP C14orf100|C24orf100|CDA06|HSPC213|HSPC327|JAMP JNK1/MAPK8 associated membrane protein protein-coding chr3-4412 chr3 4741632 4741842 + 11.7 0.000 intron (NM_001168272, intron 43 of 60) intron (NM_001168272, intron 43 of 60) 9853 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr8-2142 chr8 23287994 23288204 + 11.7 0.000 promoter-TSS (NM_001136108) promoter-TSS (NM_001136108) 7 NM_001301650 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr17-3969 chr17 64403755 64403965 + 11.7 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -13000 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr9-3558 chr9 68806811 68807021 + 11.7 0.000 intron (NM_003558, intron 2 of 15) intron (NM_003558, intron 2 of 15) 26851 NM_138333 116224 Hs.655572 NM_138333 ENSG00000187866 FAM122A C9orf42 family with sequence similarity 122A protein-coding chr19-1814 chr19 1988128 1988338 + 11.7 0.000 intron (NM_017797, intron 5 of 8) intron (NM_017797, intron 5 of 8) 27481 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chrX-514 chrX 134549845 134550055 + 11.7 0.000 promoter-TSS (NR_038998) promoter-TSS (NR_038998) -74 NR_038998 100506757 Hs.130961 NR_038998 LINC00629 LINC00629A|LINC00629B|LINC00629C|LINC00629D long intergenic non-protein coding RNA 629 ncRNA chr2-9102 chr2 205474853 205475063 + 11.7 0.000 intron (NM_057177, intron 19 of 21) intron (NM_057177, intron 19 of 21) -207542 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr3-1747 chr3 158110341 158110551 + 11.7 0.000 intron (NM_001271838, intron 1 of 9) intron (NM_001271838, intron 1 of 9) 357 NM_001271838 51319 Hs.591283 NM_016625 ENSG00000174891 RSRC1 BM-011|MRT70|SFRS21|SRrp53 arginine and serine rich coiled-coil 1 protein-coding chr5-3457 chr5 161442693 161442903 + 11.7 0.000 intron (NM_000813, intron 5 of 9) intron (NM_000813, intron 5 of 9) 105326 NM_021911 2561 Hs.303527 NM_000813 ENSG00000145864 GABRB2 ICEE2 gamma-aminobutyric acid type A receptor beta2 subunit protein-coding chrX-829 chrX 107025640 107025850 + 11.7 0.000 Intergenic Intergenic -25533 NM_001085354 79710 Hs.496544 NM_024657 ENSG00000133131 MORC4 ZCW4|ZCWCC2|dJ75H8.2 MORC family CW-type zinc finger 4 protein-coding chr6-571 chr6 37433144 37433354 + 11.7 0.000 promoter-TSS (NM_015050) promoter-TSS (NM_015050) 28 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr5-2804 chr5 10310903 10311113 + 11.7 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -3106 NM_138809 134147 Hs.192586 NM_138809 ENSG00000164237 CMBL JS-1 carboxymethylenebutenolidase homolog protein-coding chr13-1269 chr13 110627541 110627751 + 11.7 0.000 intron (NM_001242882, intron 5 of 9) intron (NM_001242882, intron 5 of 9) 12062 NM_001242881 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr13-1086 chr13 76820794 76821004 + 11.7 0.000 Intergenic Intergenic 65506 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr10-7516 chr10 13527133 13527343 + 11.7 0.000 intron (NM_001369863, intron 1 of 8) intron (NM_001369863, intron 1 of 8) -1017 NM_001370075 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chrX-2425 chrX 77431418 77431628 + 11.7 0.000 Intergenic Intergenic -15866 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr10-3539 chr10 75211443 75211653 + 11.7 0.000 5' UTR (NM_001184783, exon 4 of 12) 5' UTR (NM_001184783, exon 4 of 12) 1394 NM_001324090 7417 Hs.355927 NM_003375 ENSG00000165637 VDAC2 POR voltage dependent anion channel 2 protein-coding chr18-1328 chr18 75337986 75338196 + 11.7 0.000 Intergenic Intergenic 89612 NM_001303482 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr1-2554 chr1 15886344 15886554 + 11.7 0.000 intron (NM_015001, intron 3 of 14) intron (NM_015001, intron 3 of 14) -38302 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr1-5341 chr1 229441077 229441287 + 11.7 0.000 3' UTR (NM_018230, exon 26 of 26) 3' UTR (NM_018230, exon 26 of 26) -7086 NM_001100 58 Hs.1288 NM_001100 ENSG00000143632 ACTA1 ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3|SHPM actin alpha 1, skeletal muscle protein-coding chr10-1514 chr10 30812228 30812438 + 11.7 0.000 Intergenic Intergenic 89114 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr10-1978 chr10 33230229 33230439 + 11.7 0.000 intron (NM_001244973, intron 6 of 16) MER34A|LTR|ERV1 104333 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chrX-1447 chrX 72027588 72027798 + 11.7 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -16716 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr6-1682 chr6 10412020 10412230 + 11.7 0.000 promoter-TSS (NR_033910) promoter-TSS (NR_033910) -193 NR_033910 100130275 Hs.661431 NR_033910 TFAP2A-AS1 - TFAP2A antisense RNA 1 ncRNA chr14-2677 chr14 75042065 75042275 + 11.7 0.000 intron (NM_014381, intron 3 of 11) intron (NM_014381, intron 3 of 11) 9297 NM_014381 27030 Hs.436650 NM_014381 ENSG00000119684 MLH3 HNPCC7 mutL homolog 3 protein-coding chr2-5273 chr2 62299816 62300026 + 11.7 0.000 Intergenic Helitron3Na_Mam|RC|Helitron 84400 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr2-6090 chr2 180622269 180622479 + 11.7 0.000 Intergenic L1MEg1|LINE|L1 -69730 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr12-1798 chr12 124599251 124599461 + 11.7 0.000 Intergenic L1ME1|LINE|L1 -31744 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr12-2638 chr12 132414960 132415170 + 11.7 0.000 Intergenic Intergenic -75086 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr12-1955 chr12 111635488 111635698 + 11.7 0.000 Intergenic MIRb|SINE|MIR -35917 NR_132311 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr6-5979 chr6 87691832 87692042 + 11.7 0.000 intron (NM_018064, intron 1 of 4) intron (NM_018064, intron 1 of 4) 10296 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr22-1301 chr22 42608993 42609203 + 11.7 0.000 intron (NR_103820, intron 1 of 8) intron (NR_103820, intron 1 of 8) 5785 NR_103820 84271 Hs.505802 NM_032311 ENSG00000100227 POLDIP3 PDIP3|PDIP46|SKAR DNA polymerase delta interacting protein 3 protein-coding chr15-1576 chr15 73941111 73941321 + 11.7 0.000 intron (NM_005576, intron 1 of 6) intron (NM_005576, intron 1 of 6) -12968 NR_040068 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr15-1467 chr15 100725321 100725531 + 11.7 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 122837 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 - ankyrin repeat and SOCS box containing 7 protein-coding chr15-892 chr15 99214699 99214909 + 11.7 0.000 intron (NR_109947, intron 7 of 12) L1ME3A|LINE|L1 34777 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding chr6-1990 chr6 4155887 4156097 + 11.7 0.000 non-coding (NR_103764, exon 4 of 4) non-coding (NR_103764, exon 4 of 4) 19920 NR_103764 100507506 Hs.665936 NR_103764 ENSG00000234817 LOC100507506 - uncharacterized LOC100507506 ncRNA chr1-11532 chr1 161351729 161351939 + 11.7 0.000 intron (NM_001278172, intron 3 of 3) intron (NM_001278172, intron 3 of 3) 16049 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr10-1058 chr10 100346847 100347057 + 11.7 0.000 promoter-TSS (NM_005063) promoter-TSS (NM_005063) -281 NM_005063 6319 Hs.558396 NM_005063 ENSG00000099194 SCD FADS5|MSTP008|SCD1|SCDOS|hSCD1 stearoyl-CoA desaturase protein-coding chr22-759 chr22 35589321 35589531 + 11.7 0.000 Intergenic Intergenic 27903 NM_005368 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr11-4107 chr11 34685375 34685585 + 11.7 0.000 Intergenic Intergenic 52914 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr3-1908 chr3 168094841 168095051 + 11.7 0.000 intron (NM_001308155, intron 1 of 14) intron (NM_001308155, intron 1 of 14) 978 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chrX-516 chrX 150899516 150899726 + 11.7 0.000 promoter-TSS (NM_031462) promoter-TSS (NM_031462) -805 NM_001242614 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr2-2241 chr2 220105137 220105347 + 11.7 0.000 Intergenic Intergenic -198677 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr17-3886 chr17 50099970 50100180 + 11.7 0.000 intron (NM_002611, intron 2 of 10) intron (NM_002611, intron 2 of 10) 4380 NM_001199899 5164 Hs.256667 NM_002611 ENSG00000005882 PDK2 PDHK2|PDKII pyruvate dehydrogenase kinase 2 protein-coding chr3-7062 chr3 176447149 176447359 + 11.7 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -67849 NR_107017 102465858 NR_107017 ENSG00000283333 MIR7977 hsa-mir-7977 microRNA 7977 ncRNA chr8-5072 chr8 37925542 37925752 + 11.7 0.000 Intergenic Intergenic 14477 NM_152413 137362 Hs.380740 NM_152413 ENSG00000169154 GOT1L1 - glutamic-oxaloacetic transaminase 1 like 1 protein-coding chr11-2170 chr11 292848 293058 + 11.7 0.000 exon (NM_025092, exon 7 of 14) exon (NM_025092, exon 7 of 14) 3827 NM_025092 80162 Hs.353181 NM_025092 ENSG00000142102 PGGHG ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase protein-coding chr7-3605 chr7 31470307 31470517 + 11.7 0.000 Intergenic HERVH-int|LTR|ERV1 -43659 NM_001257967 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr14-2723 chr14 91314590 91314800 + 11.7 0.000 intron (NM_001080414, intron 14 of 29) intron (NM_001080414, intron 14 of 29) -60815 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr1-11366 chr1 39110776 39110986 + 11.7 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 26714 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr16-1783 chr16 2062879 2063089 + 11.7 0.000 exon (NM_001363528, exon 14 of 40) exon (NM_001363528, exon 14 of 40) 14782 NM_001318832 7249 Hs.90303 NM_000548 ENSG00000103197 TSC2 LAM|PPP1R160|TSC4 TSC complex subunit 2 protein-coding chr11-6658 chr11 75807481 75807691 + 11.7 0.000 Intergenic L1MC4|LINE|L1 7211 NR_144531 100506113 Hs.720913 NR_144531 ENSG00000255507 UVRAG-DT - UVRAG divergent transcript ncRNA chr11-2784 chr11 74672691 74672901 + 11.7 0.000 Intergenic Intergenic 38571 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr17-2593 chr17 77499042 77499252 + 11.7 0.000 3' UTR (NM_001293698, exon 10 of 10) 3' UTR (NM_001293698, exon 10 of 10) 23904 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr12-2364 chr12 13252664 13252874 + 11.7 0.000 Intergenic L2b|LINE|L2 56043 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr4-3076 chr4 147355996 147356206 + 11.7 0.000 Intergenic Intergenic -11384 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA chr17-5179 chr17 11959950 11960160 + 11.7 0.000 intron (NM_001372, intron 67 of 68) intron (NM_001372, intron 67 of 68) 37317 NM_144680 7566 Hs.370473 NM_144680 ENSG00000154957 ZNF18 HDSG1|KOX11|ZKSCAN6|ZNF535|ZSCAN38|Zfp535 zinc finger protein 18 protein-coding chr12-3246 chr12 62604815 62605025 + 11.7 0.000 Intergenic Intergenic 1234 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr2-6880 chr2 83927613 83927823 + 11.7 0.000 Intergenic Intergenic -362964 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr7-4190 chr7 129218725 129218935 + 11.7 0.000 Intergenic Intergenic -6200 NM_001130720 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr7-1934 chr7 44768320 44768530 + 11.7 0.000 3' UTR (NM_031449, exon 19 of 19) 3' UTR (NM_031449, exon 19 of 19) 12237 NM_174929 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr2-3169 chr2 201116699 201116909 + 11.7 0.000 intron (NR_147248, intron 1 of 10) CpG 640 NR_147251 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS|cFLIP CASP8 and FADD like apoptosis regulator protein-coding chr10-3317 chr10 3563516 3563726 + 11.7 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) -60783 NR_155744 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr15-1634 chr15 90306631 90306841 + 11.7 0.000 Intergenic Intergenic -40977 NR_102428 10519 Hs.715556 NM_006384 ENSG00000185043 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 protein-coding chr15-1159 chr15 74036972 74037182 + 11.7 0.000 TTS (NM_033244) TTS (NM_033244) 42361 NM_033244 5371 Hs.526464 NM_002675 ENSG00000140464 PML MYL|PP8675|RNF71|TRIM19 promyelocytic leukemia protein-coding chr2-8570 chr2 136303284 136303494 + 11.7 0.000 Intergenic Intergenic -185234 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr9-6220 chr9 112112613 112112823 + 11.7 0.000 intron (NM_022486, intron 7 of 16) intron (NM_022486, intron 7 of 16) 62579 NM_001282643 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr20-1003 chr20 63104863 63105073 + 11.7 0.000 TTS (NR_003244) TTS (NR_003244) -2649 NR_003245 768097 Hs.635159 NR_003245 ENSG00000231133 HAR1B HAR1R|LINC00065|NCRNA00065 highly accelerated region 1B ncRNA chr11-6789 chr11 88716779 88716989 + 11.7 0.000 intron (NM_001143831, intron 2 of 8) intron (NM_001143831, intron 2 of 8) 212308 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr12-1715 chr12 13075114 13075324 + 11.7 0.000 intron (NM_020853, intron 10 of 12) intron (NM_020853, intron 10 of 12) 20456 NM_153823 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr11-3893 chr11 107604089 107604299 + 11.7 0.000 intron (NM_001308018, intron 1 of 12) intron (NM_001308018, intron 1 of 12) 13047 NM_018712 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr1-7162 chr1 206967513 206967723 + 11.7 0.000 exon (NM_032029, exon 2 of 7) exon (NM_032029, exon 2 of 7) 2842 NM_001122979 83953 Hs.145519 NM_032029 ENSG00000162897 FCAMR CD351|FCA/MR|FKSG87 Fc fragment of IgA and IgM receptor protein-coding chr17-3263 chr17 33218117 33218327 + 11.7 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 74766 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr15-434 chr15 34038694 34038904 + 11.7 0.000 exon (NM_020371, exon 1 of 6) exon (NM_020371, exon 1 of 6) 405 NM_020371 57099 Hs.555966 NM_020371 ENSG00000169857 AVEN PDCD12 apoptosis and caspase activation inhibitor protein-coding chr2-4241 chr2 219592956 219593166 + 11.7 0.000 Intergenic Intergenic -4796 NM_052902 114790 Hs.22410 NM_052902 ENSG00000144589 STK11IP LIP1|LKB1IP|STK11IP1 serine/threonine kinase 11 interacting protein protein-coding chr22-1306 chr22 44211828 44212038 + 11.7 0.000 Intergenic Intergenic 31008 NM_022141 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr10-2429 chr10 645905 646115 + 11.7 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -3938 NM_001355387 414235 Hs.587103 NM_001012714 ENSG00000180525 PRR26 C10orf108 proline rich 26 protein-coding chr17-7256 chr17 2473627 2473837 + 11.7 0.000 intron (NM_024086, intron 3 of 9) intron (NM_024086, intron 3 of 9) 38156 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr14-1411 chr14 64629136 64629346 + 11.7 0.000 Intergenic Intergenic -75183 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr20-1472 chr20 3330132 3330342 + 11.7 0.000 intron (NM_001009984, intron 12 of 36) intron (NM_001009984, intron 12 of 36) 77425 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr13-1989 chr13 27271970 27272180 + 11.7 0.000 intron (NM_206827, intron 3 of 3) (AAAAC)n|Simple_repeat|Simple_repeat 898 NM_001331126 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr11-3542 chr11 17538795 17539005 + 11.7 0.000 intron (NR_123738, intron 1 of 19) LTR33|LTR|ERVL 5516 NM_005709 10083 Hs.502072 NM_005709 ENSG00000006611 USH1C AIE-75|DFNB18|DFNB18A|NY-CO-37|NY-CO-38|PDZ-45|PDZ-73|PDZ-73/NY-CO-38|PDZ73|PDZD7C|ush1cpst USH1 protein network component harmonin protein-coding chr9-4076 chr9 124735492 124735702 + 11.7 0.000 intron (NM_001278546, intron 1 of 9) intron (NM_001278546, intron 1 of 9) 35714 NM_001489 2649 Hs.20131 NM_001489 ENSG00000148200 NR6A1 CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR nuclear receptor subfamily 6 group A member 1 protein-coding chr22-1110 chr22 37966185 37966395 + 11.7 0.000 intron (NR_125371, intron 3 of 4) L2c|LINE|L2 -1273 NR_106878 102465492 NR_106878 ENSG00000284289 MIR6820 hsa-mir-6820 microRNA 6820 ncRNA chr8-2206 chr8 5415752 5415962 + 11.7 0.000 Intergenic L1MB8|LINE|L1 -420943 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr18-492 chr18 9543052 9543262 + 11.7 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 67644 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr6-838 chr6 151763497 151763707 + 11.7 0.000 intron (NM_001122742, intron 2 of 9) intron (NM_001122742, intron 2 of 9) -42071 NM_001122741 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr4-2446 chr4 169202007 169202217 + 11.7 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 68844 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr9-4041 chr9 94569389 94569599 + 11.7 0.000 TTS (NR_121566) TTS (NR_121566) 14449 NR_121566 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr1-3402 chr1 226657031 226657241 + 11.7 0.000 non-coding (NR_103784, exon 2 of 2) non-coding (NR_103784, exon 2 of 2) 17932 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr7-5972 chr7 101310396 101310606 + 11.7 0.000 TTS (NM_001287525) TTS (NM_001287525) 2194 NR_110115 101927746 NR_110115 LOC101927746 - uncharacterized LOC101927746 ncRNA chr1-3487 chr1 77539884 77540094 + 11.7 0.000 intron (NM_012093, intron 13 of 13) intron (NM_012093, intron 13 of 13) 142669 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr13-1098 chr13 100203877 100204087 + 11.7 0.000 intron (NR_148031, intron 6 of 22) intron (NR_148031, intron 6 of 22) 114889 NM_001352606 5095 Hs.80741 NM_000282 ENSG00000175198 PCCA - propionyl-CoA carboxylase subunit alpha protein-coding chr17-4097 chr17 80805497 80805707 + 11.7 0.000 promoter-TSS (NR_110852) promoter-TSS (NR_110852) 30 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr1-5283 chr1 211640015 211640225 + 11.7 0.000 intron (NR_131925, intron 1 of 2) MIR|SINE|MIR 312 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr7-2912 chr7 133208362 133208572 + 11.7 0.000 Intergenic LTR10B|LTR|ERV1 -44600 NM_001037126 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr14-1946 chr14 25078783 25078993 + 11.7 0.000 Intergenic LTR16B2|LTR|ERVL -28591 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr11-4565 chr11 124769970 124770180 + 11.7 0.000 intron (NM_001312921, intron 3 of 3) intron (NM_001312921, intron 3 of 3) 6167 NM_001312920 79684 Hs.146079 NM_024631 ENSG00000120458 MSANTD2 C11orf61 Myb/SANT DNA binding domain containing 2 protein-coding chr1-9571 chr1 42800595 42800805 + 11.7 0.000 3' UTR (NM_001354602, exon 6 of 6) 3' UTR (NM_001354602, exon 6 of 6) 15668 NM_001354602 100129924 Hs.720780 NM_001242750 ENSG00000274386 TMEM269 - transmembrane protein 269 protein-coding chr11-8550 chr11 132450343 132450553 + 11.7 0.000 intron (NM_002545, intron 3 of 6) intron (NM_002545, intron 3 of 6) 166146 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr8-1128 chr8 118472775 118472985 + 11.7 0.000 intron (NM_001101676, intron 2 of 4) intron (NM_001101676, intron 2 of 4) -148121 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr9-5474 chr9 99566754 99566964 + 11.7 0.000 Intergenic L2a|LINE|L2 -191602 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr17-2348 chr17 64016146 64016356 + 11.7 0.000 intron (NM_001099788, intron 1 of 5) L1M5|LINE|L1 4382 NM_001099789 3384 Hs.431460 NM_000873 ENSG00000108622 ICAM2 CD102 intercellular adhesion molecule 2 protein-coding chr11-2934 chr11 69868857 69869067 + 11.7 0.000 Intergenic Intergenic -49546 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr10-2357 chr10 88754412 88754622 + 11.7 0.000 Intergenic Intergenic -6889 NM_001102469 643418 Hs.632091 NM_001102469 ENSG00000204020 LIPN ARCI8|LI4|LIPL4|bA186O14.3 lipase family member N protein-coding chr13-1209 chr13 51760681 51760891 + 11.7 0.000 3' UTR (NM_052950, exon 12 of 12) 3' UTR (NM_052950, exon 12 of 12) 43376 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr8-1980 chr8 77648622 77648832 + 11.7 0.000 Intergenic Intergenic 198030 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr2-5540 chr2 160381672 160381882 + 11.7 0.000 intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) 26105 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr6-2544 chr6 25232615 25232825 + 11.7 0.000 Intergenic Intergenic 28687 NR_110862 101928663 Hs.561600 NR_110862 LOC101928663 - uncharacterized LOC101928663 ncRNA chr12-1235 chr12 21941991 21942201 + 11.7 0.000 Intergenic CpG -5402 NM_005691 10060 Hs.732701 NM_005691 ENSG00000069431 ABCC9 ABC37|ATFB12|CANTU|CMD1O|SUR2 ATP binding cassette subfamily C member 9 protein-coding chr6-1454 chr6 169654895 169655105 + 11.7 0.000 intron (NM_182552, intron 13 of 25) MER41G|LTR|ERV1 47029 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr2-5022 chr2 231381511 231381721 + 11.7 0.000 Intergenic Intergenic -14094 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr20-1725 chr20 41222746 41222956 + 11.7 0.000 intron (NM_015035, intron 2 of 3) intron (NM_015035, intron 2 of 3) 53828 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr17-3391 chr17 1548534 1548744 + 11.7 0.000 intron (NM_006224, intron 3 of 11) intron (NM_006224, intron 3 of 11) 14153 NM_006224 5306 Hs.429819 NM_006224 ENSG00000174238 PITPNA HEL-S-36|PI-TPalpha|PITPN|VIB1A phosphatidylinositol transfer protein alpha protein-coding chr15-885 chr15 85312737 85312947 + 11.7 0.000 Intergenic L1MCc|LINE|L1 -67754 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr22-2455 chr22 20255829 20256039 + 11.7 0.000 intron (NM_023004, intron 1 of 1) intron (NM_023004, intron 1 of 1) -6723 NR_031618 100302118 NR_031618 ENSG00000221039 MIR1286 MIRN1286|hsa-mir-1286|mir-1286 microRNA 1286 ncRNA chr16-2043 chr16 56643091 56643301 + 11.7 0.000 promoter-TSS (NR_027781) promoter-TSS (NR_027781) -491 NR_027781 326343 Hs.679600 NM_175620 MT1DP MTM metallothionein 1D, pseudogene pseudo chr1-10710 chr1 193486830 193487040 + 11.7 0.000 Intergenic Intergenic 182190 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr10-2863 chr10 77500794 77501004 + 11.7 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 136909 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10-1400 chr10 79246501 79246711 + 11.7 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -100863 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr9-2790 chr9 115713832 115714042 + 11.7 0.000 Intergenic MER103C|DNA|hAT-Charlie 30302 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr7-4035 chr7 157346019 157346229 + 11.7 0.000 intron (NM_005494, intron 1 of 7) intron (NM_005494, intron 1 of 7) 9120 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr13-1860 chr13 19890177 19890387 + 11.7 0.000 Intergenic AluJb|SINE|Alu -26633 NM_001142684 9205 Hs.530988 NM_014242 ENSG00000132950 ZMYM5 HSPC050|MYM|ZNF198L1|ZNF237 zinc finger MYM-type containing 5 protein-coding chr2-6841 chr2 70147147 70147357 + 11.7 0.000 Intergenic Intergenic -21936 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr15-976 chr15 57769409 57769619 + 11.7 0.000 Intergenic Intergenic 62800 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr16-2501 chr16 89424497 89424707 + 11.7 0.000 intron (NR_045839, intron 1 of 9) L1MD2|LINE|L1 -6316 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr2-2602 chr2 18599757 18599967 + 11.7 0.000 Intergenic L2c|LINE|L2 -10282 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr22-1493 chr22 36220621 36220831 + 11.7 0.000 Intergenic MLT2B3|LTR|ERVL -15893 NM_030643 80832 Hs.115099 NM_030643 ENSG00000100336 APOL4 APOL-IV|APOLIV apolipoprotein L4 protein-coding chr9-2171 chr9 129470567 129470777 + 11.7 0.000 Intergenic Intergenic -17988 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr2-2333 chr2 158529644 158529854 + 11.7 0.000 intron (NM_001005476, intron 1 of 20) L3b|LINE|CR1 72797 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr8-6985 chr8 108054424 108054634 + 11.7 0.000 intron (NM_178565, intron 2 of 5) MLT1J2|LTR|ERVL-MaLR 27410 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr18-388 chr18 63075186 63075396 + 11.7 0.000 Intergenic Intergenic 244089 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr15-2758 chr15 26685222 26685432 + 11.7 0.000 intron (NM_001278631, intron 3 of 9) intron (NM_001278631, intron 3 of 9) 31438 NM_001191320 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr9-2108 chr9 92122495 92122705 + 11.7 0.000 Intergenic LTR38B|LTR|ERV1 -7187 NM_001368272 10558 Hs.90458 NM_006415 ENSG00000090054 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase long chain base subunit 1 protein-coding chr1-13223 chr1 212799163 212799373 + 11.7 0.000 intron (NM_001146170, intron 4 of 8) L2a|LINE|L2 7374 NM_001146169 128387 Hs.530538 NM_001042552 ENSG00000203705 TATDN3 - TatD DNase domain containing 3 protein-coding chr2-4382 chr2 37460279 37460489 + 11.7 0.000 Intergenic Intergenic 115754 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr2-3327 chr2 171688279 171688489 + 11.7 0.000 intron (NM_001271787, intron 1 of 15) intron (NM_001271787, intron 1 of 15) 629 NM_001271785 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr8-3009 chr8 117765221 117765431 + 11.7 0.000 Intergenic Intergenic 155587 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr1-4124 chr1 858704 858914 + 11.7 0.000 non-coding (NR_047519, exon 6 of 6) non-coding (NR_047519, exon 6 of 6) 17993 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr1-5691 chr1 51789777 51789987 + 11.7 0.000 TTS (NM_024586) TTS (NM_024586) 46520 NR_031580 100313892 NR_031580 ENSG00000283899 MIR761 hsa-mir-761 microRNA 761 ncRNA chr10-8548 chr10 93542219 93542429 + 11.7 0.000 Intergenic MER102a|DNA|hAT-Charlie -24341 NM_001195755 338557 Hs.661022 NM_181745 ENSG00000186188 FFAR4 BMIQ10|GPR120|GPR129|GT01|O3FAR1|PGR4 free fatty acid receptor 4 protein-coding chr8-2756 chr8 112759111 112759321 + 11.7 0.000 intron (NM_001363185, intron 11 of 66) intron (NM_001363185, intron 11 of 66) 115723 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr4-922 chr4 2418106 2418316 + 11.7 0.000 promoter-TSS (NM_001193282) promoter-TSS (NM_001193282) 434 NM_001172656 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr12-2127 chr12 84070335 84070545 + 11.7 0.000 Intergenic L2a|LINE|L2 842359 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr1-9428 chr1 33239080 33239290 + 11.7 0.000 Intergenic Intergenic -17307 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr2-2266 chr2 9752735 9752945 + 11.7 0.000 Intergenic Intergenic -90602 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chrX-1311 chrX 125757763 125757973 + 11.7 0.000 Intergenic Intergenic -351894 NR_110409 101928495 Hs.545998 NR_110409 ENSG00000237208 LOC101928495 - uncharacterized LOC101928495 ncRNA chr2-4513 chr2 27038095 27038305 + 11.7 0.000 exon (NM_017727, exon 10 of 17) exon (NM_017727, exon 10 of 17) 5235 NM_001083590 54867 Hs.533934 NM_017727 ENSG00000119777 TMEM214 - transmembrane protein 214 protein-coding chr19-3609 chr19 53884652 53884862 + 11.7 0.000 intron (NM_002739, intron 3 of 17) (CAGAGA)n|Simple_repeat|Simple_repeat 2560 NM_002739 5582 Hs.631564 NM_002739 ENSG00000126583 PRKCG PKC-gamma|PKCC|PKCG|PKCI(3)|PKCgamma|SCA14 protein kinase C gamma protein-coding chr12-5327 chr12 114203915 114204125 + 11.7 0.000 Intergenic MSTB|LTR|ERVL-MaLR 37750 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr4-2522 chr4 40004152 40004362 + 11.7 0.000 Intergenic Intergenic -26301 NM_001100400 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr3-6124 chr3 54298702 54298912 + 11.7 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 176255 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr2-3038 chr2 71748117 71748327 + 11.7 0.000 Intergenic Intergenic 281523 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr18-1533 chr18 11176608 11176818 + 11.7 0.000 Intergenic Intergenic -27951 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr22-951 chr22 29260043 29260253 + 11.7 0.000 TTS (NM_133455) TTS (NM_133455) 7833 NR_138044 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr5-763 chr5 181246322 181246532 + 11.7 0.000 promoter-TSS (NR_109909) promoter-TSS (NR_109909) -114 NR_109909 101928649 Hs.723307 NR_109909 CTC-338M12.4 - uncharacterized LOC101928649 ncRNA chr2-2706 chr2 42969621 42969831 + 11.7 0.000 Intergenic L2a|LINE|L2 69817 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chrX-1080 chrX 138743533 138743743 + 11.7 0.000 intron (NM_001139498, intron 2 of 5) L1MC1|LINE|L1 -4285 NM_033642 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr1-5469 chr1 90800362 90800572 + 11.7 0.000 intron (NR_135038, intron 1 of 2) intron (NR_135038, intron 1 of 2) 35694 NR_147932 105378853 Hs.546492 NR_135038 ENSG00000233593 LINC02609 - long intergenic non-protein coding RNA 2609 ncRNA chr6-3120 chr6 102390601 102390811 + 11.7 0.000 Intergenic L1PBa|LINE|L1 991721 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr6-3305 chr6 161438994 161439204 + 11.7 0.000 intron (NM_004562, intron 9 of 11) intron (NM_004562, intron 9 of 11) -31878 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr2-8091 chr2 75238566 75238776 + 11.7 0.000 Intergenic Intergenic -39151 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr12-1400 chr12 124160084 124160294 + 11.7 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -128975 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr3-2191 chr3 8589808 8590018 + 11.7 0.000 Intergenic Intergenic 18131 NR_024065 29931 Hs.433151 NM_013343 LINC00312 ERR-10|ERR10|LMCD1DN|LOH3CR2A|NAG-7|NAG7|NCRNA00312 long intergenic non-protein coding RNA 312 ncRNA chr14-2533 chr14 21040112 21040322 + 11.7 0.000 intron (NM_001282211, intron 1 of 14) intron (NM_001282211, intron 1 of 14) -2145 NM_032572 84659 Hs.525206 NM_032572 ENSG00000165799 RNASE7 RAE1 ribonuclease A family member 7 protein-coding chr10-2754 chr10 121745989 121746199 + 11.7 0.000 intron (NM_001001976, intron 11 of 11) L2a|LINE|L2 -147636 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr3-5747 chr3 20724176 20724386 + 11.7 0.000 Intergenic Intergenic 381813 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr4-2560 chr4 84793292 84793502 + 11.7 0.000 intron (NM_014991, intron 21 of 67) L2c|LINE|L2 -172219 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr15-1752 chr15 57923896 57924106 + 11.7 0.000 Intergenic Intergenic 90022 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr18-943 chr18 6013439 6013649 + 11.7 0.000 intron (NR_158609, intron 15 of 17) intron (NR_158609, intron 15 of 17) -117590 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr19-4084 chr19 13675985 13676195 + 11.7 0.000 Intergenic L1MEd|LINE|L1 -55662 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr2-3781 chr2 10646261 10646471 + 11.7 0.000 intron (NR_048552, intron 11 of 19) intron (NR_048552, intron 11 of 19) 43609 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr11-4550 chr11 122116341 122116551 + 11.7 0.000 promoter-TSS (NM_001001786) promoter-TSS (NM_001001786) -231 NM_001001786 414899 Hs.686109 NM_001001786 ENSG00000259571 BLID BRCC2 BH3-like motif containing, cell death inducer protein-coding chr6-1442 chr6 158062154 158062364 + 11.7 0.000 intron (NM_003898, intron 8 of 26) intron (NM_003898, intron 8 of 26) 45166 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr6-1177 chr6 113970391 113970601 + 11.7 0.000 non-coding (NR_073443, exon 1 of 14) non-coding (NR_073443, exon 1 of 14) 228 NR_073443 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr19-2446 chr19 53541655 53541865 + 11.7 0.000 intron (NM_001317113, intron 2 of 4) AluJr|SINE|Alu 2972 NM_001253800 55422 Hs.185674 NM_018555 ENSG00000130844 ZNF331 RITA|ZNF361|ZNF463 zinc finger protein 331 protein-coding chr15-1558 chr15 69225842 69226052 + 11.7 0.000 intron (NM_001324092, intron 2 of 3) intron (NM_001324092, intron 2 of 3) 65312 NM_001324094 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr6-2052 chr6 90137608 90137818 + 11.7 0.000 intron (NM_021813, intron 4 of 8) intron (NM_021813, intron 4 of 8) 159130 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr10-4390 chr10 49534576 49534786 + 11.7 0.000 intron (NM_001277059, intron 1 of 5) intron (NM_001277059, intron 1 of 5) 4440 NM_000124 2074 Hs.49063 NM_000124 ENSG00000225830 ERCC6 ARMD5|CKN2|COFS|COFS1|CSB|CSB-PGBD3|POF11|RAD26|UVSS1 ERCC excision repair 6, chromatin remodeling factor protein-coding chr20-3653 chr20 10093362 10093572 + 11.7 0.000 intron (NR_040710, intron 3 of 4) intron (NR_040710, intron 3 of 4) 58480 NM_001303472 63926 Hs.70903 NM_022096 ENSG00000132623 ANKEF1 ANKRD5 ankyrin repeat and EF-hand domain containing 1 protein-coding chr4-4438 chr4 52838372 52838582 + 11.7 0.000 Intergenic Intergenic -23840 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr21-357 chr21 46562758 46562968 + 11.7 0.000 intron (NM_015151, intron 34 of 37) intron (NM_015151, intron 34 of 37) 42219 NM_006272 6285 Hs.422181 NM_006272 ENSG00000160307 S100B NEF|S100|S100-B|S100beta S100 calcium binding protein B protein-coding chr6-1017 chr6 80223775 80223985 + 11.7 0.000 intron (NR_134945, intron 9 of 10) intron (NR_134945, intron 9 of 10) 117209 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr10-4090 chr10 57001191 57001401 + 11.7 0.000 Intergenic Intergenic 303263 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr19-1592 chr19 11241821 11242031 + 11.7 0.000 TTS (NM_018687) TTS (NM_018687) 2307 NM_018687 55908 Hs.534467 NM_018687 ENSG00000130173 ANGPTL8 C19orf80|PRO1185|PVPA599|RIFL|TD26 angiopoietin like 8 protein-coding chr9-2631 chr9 21681695 21681905 + 11.7 0.000 Intergenic Intergenic -120836 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr22-1937 chr22 46669224 46669434 + 11.7 0.000 intron (NM_015124, intron 13 of 18) intron (NM_015124, intron 13 of 18) 48943 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chrX-314 chrX 109537143 109537353 + 11.7 0.000 promoter-TSS (NM_001242618) promoter-TSS (NM_001242618) 43 NM_001242618 55916 Hs.25010 NM_018698 ENSG00000101888 NXT2 P15-2 nuclear transport factor 2 like export factor 2 protein-coding chr9-7077 chr9 127098722 127098932 + 11.7 0.000 intron (NM_012098, intron 2 of 4) intron (NM_012098, intron 2 of 4) 23808 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr17-5970 chr17 76994298 76994508 + 11.7 0.000 Intergenic Intergenic -25204 NR_136417 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr1-3307 chr1 3831718 3831928 + 11.7 0.000 intron (NM_014704, intron 12 of 21) intron (NM_014704, intron 12 of 21) 25388 NM_014704 9731 Hs.133089 NM_014704 ENSG00000116198 CEP104 CFAP256|GlyBP|JBTS25|KIAA0562|ROC22 centrosomal protein 104 protein-coding chr2-7157 chr2 201621433 201621643 + 11.7 0.000 3' UTR (NM_152388, exon 12 of 12) 3' UTR (NM_152388, exon 12 of 12) -2360 NM_001168216 151254 Hs.335788 NM_152525 ENSG00000155754 C2CD6 ALS2CR11 C2 calcium dependent domain containing 6 protein-coding chr1-2332 chr1 211259255 211259465 + 11.7 0.000 promoter-TSS (NM_001136225) promoter-TSS (NM_001136225) 83 NR_146434 55758 Hs.356399 NM_018254 ENSG00000117625 RCOR3 - REST corepressor 3 protein-coding chr19-2405 chr19 17750422 17750632 + 11.7 0.000 promoter-TSS (NM_015122) promoter-TSS (NM_015122) -950 NM_015122 23149 Hs.96485 NM_015122 ENSG00000130475 FCHO1 - FCH domain only 1 protein-coding chr1-3845 chr1 31647233 31647443 + 11.7 0.000 Intergenic L2|LINE|L2 -2462 NM_012392 553115 Hs.470417 NM_012392 ENSG00000162517 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding chr8-2749 chr8 108025357 108025567 + 11.7 0.000 intron (NM_178565, intron 2 of 5) L1MC4|LINE|L1 56477 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr6-3675 chr6 151198881 151199091 + 11.7 0.000 intron (NR_125868, intron 1 of 2) intron (NR_125868, intron 1 of 2) 29471 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr1-12753 chr1 67827209 67827419 + 11.7 0.000 intron (NM_018841, intron 1 of 3) intron (NM_018841, intron 1 of 3) -4974 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12, DIRAS3 and WLS antisense RNA 1 ncRNA chr1-3938 chr1 98384658 98384868 + 11.7 0.000 Intergenic Intergenic 174052 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr7-4563 chr7 5646872 5647082 + 11.7 0.000 intron (NM_207111, intron 14 of 16) L1MB5|LINE|L1 33484 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr5-8747 chr5 146666469 146666679 + 11.7 0.000 intron (NM_181678, intron 6 of 10) L3|LINE|CR1 -150461 NM_194251 134391 Hs.483732 NM_194251 ENSG00000173250 GPR151 GALR4|GALRL|GPCR|GPCR-2037|PGR7 G protein-coupled receptor 151 protein-coding chr8-2570 chr8 41285413 41285623 + 11.7 0.000 intron (NM_003012, intron 2 of 2) intron (NM_003012, intron 2 of 2) -14375 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr19-2643 chr19 6087515 6087725 + 11.7 0.000 intron (NM_000635, intron 1 of 17) intron (NM_000635, intron 1 of 17) 22880 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr14-1053 chr14 54976465 54976675 + 11.7 0.000 intron (NM_007086, intron 16 of 25) intron (NM_007086, intron 16 of 25) 50529 NM_007086 11169 Hs.385998 NM_007086 ENSG00000198554 WDHD1 AND-1|AND1|CHTF4|CTF4 WD repeat and HMG-box DNA binding protein 1 protein-coding chr17-4377 chr17 19875717 19875927 + 11.7 0.000 Intergenic Charlie1b|DNA|hAT-Charlie -7886 NM_014683 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr10-1531 chr10 77507407 77507617 + 11.7 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 130296 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr4-8139 chr4 127577517 127577727 + 11.7 0.000 Intergenic L2a|LINE|L2 -55335 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr2-4107 chr2 149817556 149817766 + 11.7 0.000 intron (NR_145421, intron 2 of 4) intron (NR_145421, intron 2 of 4) 41530 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr10-1722 chr10 88951515 88951725 + 11.7 0.000 intron (NM_001320855, intron 1 of 8) intron (NM_001320855, intron 1 of 8) 1153 NM_001613 59 Hs.500483 NM_001613 ENSG00000107796 ACTA2 ACTSA actin alpha 2, smooth muscle protein-coding chr10-4625 chr10 121579820 121580030 + 11.7 0.000 intron (NM_001320658, intron 2 of 17) MamRTE1|LINE|RTE-BovB 14042 NM_001144914 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr11-5572 chr11 103881183 103881393 + 11.7 0.000 Intergenic Intergenic 31382 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr4-1941 chr4 105667242 105667452 + 11.7 0.000 intron (NM_001242729, intron 12 of 13) intron (NM_001242729, intron 12 of 13) 41342 NM_020395 57117 Hs.480454 NM_020395 ENSG00000138785 INTS12 INT12|PHF22|SBBI22 integrator complex subunit 12 protein-coding chr1-11698 chr1 8028384 8028594 + 11.7 0.000 Intergenic Intergenic -2180 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr17-1606 chr17 75499489 75499699 + 11.7 0.000 TTS (NR_106843) TTS (NR_106843) 1046 NR_106843 102466911 NR_106843 ENSG00000284595 MIR6785 hsa-mir-6785 microRNA 6785 ncRNA chr19-2677 chr19 13718894 13719104 + 11.7 0.000 Intergenic Intergenic -12753 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr2-7902 chr2 55857217 55857427 + 11.7 0.000 Intergenic MIRb|SINE|MIR 66460 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chr5-2135 chr5 81394388 81394598 + 11.7 0.000 promoter-TSS (NM_130767) promoter-TSS (NM_130767) -359 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr12-2166 chr12 124752589 124752799 + 11.7 0.000 Intergenic Intergenic 86977 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr17-2594 chr17 77535939 77536149 + 11.7 0.000 intron (NR_148967, intron 2 of 2) intron (NR_148967, intron 2 of 2) 9043 NR_148967 400622 Hs.514516 NR_148967 LOC400622 - uncharacterized LOC400622 ncRNA chr1-3067 chr1 17551963 17552173 + 11.7 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) 12370 NM_018125 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr9-2134 chr9 110583368 110583578 + 11.7 0.000 Intergenic Intergenic -3732 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr9-4223 chr9 74788620 74788830 + 11.7 0.000 exon (NM_001177310, exon 20 of 39) exon (NM_001177310, exon 20 of 39) 98622 NM_001177311 140803 Hs.272225 NM_017662 ENSG00000119121 TRPM6 CHAK2|HMGX|HOMG|HOMG1|HSH transient receptor potential cation channel subfamily M member 6 protein-coding chr17-2167 chr17 49895181 49895391 + 11.7 0.000 Intergenic Intergenic -47269 NM_001077506 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr5-7524 chr5 37026650 37026860 + 11.7 0.000 intron (NM_015384, intron 31 of 45) intron (NM_015384, intron 31 of 45) 149986 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr16-2166 chr16 66894490 66894700 + 11.7 0.000 Intergenic Intergenic 14080 NM_001329929 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr12-3290 chr12 75496057 75496267 + 11.7 0.000 3' UTR (NM_007043, exon 10 of 10) 3' UTR (NM_007043, exon 10 of 10) 15407 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr6-4903 chr6 94166114 94166324 + 11.7 0.000 Intergenic L1P4a|LINE|L1 447916 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr8-1572 chr8 127735624 127735834 + 11.7 0.000 promoter-TSS (NM_002467) promoter-TSS (NM_002467) 295 NM_001354870 4609 Hs.202453 NM_002467 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc MYC proto-oncogene, bHLH transcription factor protein-coding chr17-6975 chr17 48840589 48840799 + 11.7 0.000 intron (NM_001261395, intron 1 of 11) L2c|LINE|L2 9659 NM_001261390 10241 Hs.514920 NM_005831 ENSG00000136436 CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 protein-coding chr2-4620 chr2 150212917 150213127 + 11.7 0.000 Intergenic Intergenic 43985 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr19-2130 chr19 2202108 2202318 + 11.7 0.000 intron (NM_032482, intron 8 of 27) intron (NM_032482, intron 8 of 27) 31936 NR_031596 100302283 NR_031596 ENSG00000221411 MIR1227 MIRN1227|hsa-mir-1227|mir-1227 microRNA 1227 ncRNA chr13-891 chr13 39776624 39776834 + 11.7 0.000 intron (NM_001145079, intron 18 of 18) intron (NM_001145079, intron 18 of 18) -112594 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr7-4308 chr7 30593930 30594140 + 11.7 0.000 promoter-TSS (NM_001316772) promoter-TSS (NM_001316772) -700 NM_001316772 2617 Hs.404321 NM_002047 ENSG00000106105 GARS CMT2D|DSMAV|GlyRS|HMN5|SMAD1 glycyl-tRNA synthetase protein-coding chr16-2444 chr16 84279241 84279451 + 11.7 0.000 Intergenic LTR33A_|LTR|ERVL -15532 NM_021197 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr4-3449 chr4 94695138 94695348 + 11.7 0.000 Intergenic AluSz|SINE|Alu 62290 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr22-1628 chr22 32156800 32157010 + 11.7 0.000 intron (NM_001010859, intron 1 of 8) L1MC5a|LINE|L1 2398 NM_001010859 150297 Hs.426551 NM_001010859 ENSG00000205856 C22orf42 dJ90G24.6 chromosome 22 open reading frame 42 protein-coding chr20-1084 chr20 50130918 50131128 + 11.7 0.000 intron (NM_199129, intron 2 of 5) intron (NM_199129, intron 2 of 5) -15066 NM_001257393 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr4-1117 chr4 76950743 76950953 + 11.7 0.000 intron (NM_018243, intron 1 of 9) CpG-21283 1096 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr9-3539 chr9 36566661 36566871 + 11.7 0.000 Intergenic Intergenic -6096 NM_001256691 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr12-1620 chr12 100267879 100268089 + 11.7 0.000 promoter-TSS (NR_135073) promoter-TSS (NR_135073) 600 NM_001330253 55681 Hs.506481 NM_017988 ENSG00000136021 SCYL2 CVAK104 SCY1 like pseudokinase 2 protein-coding chr8-2694 chr8 94036007 94036217 + 11.7 0.000 Intergenic Intergenic 119165 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr8-2430 chr8 100676586 100676796 + 11.7 0.000 Intergenic Intergenic 26333 NR_106992 102466854 NR_106992 ENSG00000284570 MIR7705 hsa-mir-7705 microRNA 7705 ncRNA chr11-4323 chr11 70135515 70135725 + 11.7 0.000 intron (NM_018043, intron 11 of 25) intron (NM_018043, intron 11 of 25) 50210 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr22-1714 chr22 18066450 18066660 + 11.7 0.000 Intergenic Intergenic -11365 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr5-5908 chr5 40823172 40823382 + 11.7 0.000 Intergenic AluSp|SINE|Alu 9458 NR_002583 619564 NR_002583 ENSG00000212296 SNORD72 HBII-240 small nucleolar RNA, C/D box 72 snoRNA chr1-2847 chr1 112396103 112396313 + 11.7 0.000 promoter-TSS (NM_018704) promoter-TSS (NM_018704) -6 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr11-2656 chr11 61696084 61696294 + 11.7 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 15798 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr6-7593 chr6 75147490 75147700 + 11.7 0.000 intron (NM_080645, intron 8 of 50) intron (NM_080645, intron 8 of 50) -18813 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr2-2384 chr2 9234922 9235132 + 11.7 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 28215 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr6-3781 chr6 18240406 18240616 + 11.7 0.000 intron (NM_003472, intron 7 of 10) MIR|SINE|MIR 24019 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr13-2964 chr13 53126882 53127092 + 11.7 0.000 Intergenic Intergenic 24913 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr4-429 chr4 94757884 94758094 + 11.7 0.000 promoter-TSS (NM_001203) promoter-TSS (NM_001203) 34 NM_001203 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr1-6345 chr1 6250782 6250992 + 11.7 0.000 intron (NM_207370, intron 4 of 5) MIR|SINE|MIR 6708 NM_001024598 390992 Hs.532677 NM_001024598 ENSG00000173673 HES3 bHLHb43 hes family bHLH transcription factor 3 protein-coding chr11-3379 chr11 127017575 127017785 + 11.7 0.000 Intergenic Intergenic 14770 NR_040078 283165 Hs.730461 NM_173579 ENSG00000218109 KIRREL3-AS3 NCRNA00288|PRR10 KIRREL3 antisense RNA 3 ncRNA chr11-3006 chr11 127670325 127670535 + 11.7 0.000 Intergenic LTR9|LTR|ERV1 399360 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr8-1068 chr8 91318608 91318818 + 11.7 0.000 intron (NM_134266, intron 5 of 18) intron (NM_134266, intron 5 of 18) 69394 NM_134266 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chr6-3020 chr6 49143446 49143656 + 11.7 0.000 Intergenic Intergenic 319702 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr3-2484 chr3 141368338 141368548 + 11.7 0.000 intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) -17982 NM_001350099 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr13-3937 chr13 59744248 59744458 + 11.7 0.000 intron (NM_001258366, intron 26 of 26) L2b|LINE|L2 -268365 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr8-1489 chr8 41653837 41654047 + 11.7 0.000 3' UTR (NM_001142446, exon 43 of 43) 3' UTR (NM_001142446, exon 43 of 43) -3125 NM_001364841 157848 NM_152568 ENSG00000165066 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding chr17-1620 chr17 79815134 79815344 + 11.7 0.000 Intergenic CpG -8213 NR_146504 105371919 NR_146504 ENSG00000262772 LINC01977 - long intergenic non-protein coding RNA 1977 ncRNA chr5-3086 chr5 38720088 38720298 + 11.7 0.000 promoter-TSS (NR_104631) promoter-TSS (NR_104631) 80 NR_104631 101926904 Hs.634191 NR_104631 ENSG00000249740 LINC01265 - long intergenic non-protein coding RNA 1265 ncRNA chr18-1096 chr18 59324498 59324708 + 11.7 0.000 Intergenic MLT2B1|LTR|ERVL -5954 NM_181654 339302 Hs.449884 NM_181654 ENSG00000166569 CPLX4 CPX-IV|CPXIV complexin 4 protein-coding chr20-1618 chr20 14062957 14063167 + 11.7 0.000 intron (NM_001351663, intron 2 of 17) L1M5|LINE|L1 67546 NM_001351661 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr1-6797 chr1 87426947 87427157 + 11.7 0.000 Intergenic Intergenic -55397 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr2-5853 chr2 238123769 238123979 + 11.7 0.000 intron (NM_194312, intron 5 of 8) intron (NM_194312, intron 5 of 8) -3516 NM_001308370 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr11-4298 chr11 67856774 67856984 + 11.7 0.000 Intergenic LTR7|LTR|ERV1 -51543 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr11-2199 chr11 46291766 46291976 + 11.7 0.000 intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 14209 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr2-2376 chr2 240790162 240790372 + 11.7 0.000 intron (NM_004321, intron 2 of 46) intron (NM_004321, intron 2 of 46) 29952 NM_001320705 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr3-7786 chr3 79595715 79595925 + 11.7 0.000 intron (NM_002941, intron 1 of 30) AluJr4|SINE|Alu 87933 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA chr4-3710 chr4 61581008 61581218 + 11.7 0.000 intron (NM_001371343, intron 4 of 23) LTR43|LTR|ERV1 378941 NM_001371342 chr4-1552 chr4 653999 654209 + 11.7 0.000 exon (NM_001145291, exon 5 of 22) exon (NM_001145291, exon 5 of 22) 927 NM_001145292 5158 Hs.623810 NM_000283 ENSG00000133256 PDE6B CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1 phosphodiesterase 6B protein-coding chr10-5210 chr10 61903610 61903820 + 11.7 0.000 intron (NM_032199, intron 2 of 9) intron (NM_032199, intron 2 of 9) 2016 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr19-6891 chr19 45274739 45274949 + 11.7 0.000 intron (NM_001199867, intron 8 of 16) intron (NM_001199867, intron 8 of 16) 23573 NM_001199867 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr8-1371 chr8 133026101 133026311 + 11.7 0.000 intron (NM_003235, intron 40 of 47) intron (NM_003235, intron 40 of 47) 20375 NR_107002 102466865 NR_107002 ENSG00000276961 MIR7848 hsa-mir-7848 microRNA 7848 ncRNA chr7-1302 chr7 74306796 74307006 + 11.7 0.000 intron (NM_032421, intron 1 of 15) MIRb|SINE|MIR 17426 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr7-2305 chr7 93043678 93043888 + 11.7 0.000 Intergenic Intergenic 74196 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding chr13-641 chr13 21583570 21583780 + 11.7 0.000 intron (NM_152726, intron 1 of 11) intron (NM_152726, intron 1 of 11) 20495 NM_152726 221154 Hs.412103 NM_152726 ENSG00000165487 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding chr3-11011 chr3 180633724 180633934 + 11.7 0.000 intron (NM_181426, intron 13 of 19) L1PREC2|LINE|L1 31666 NM_001042601 151613 Hs.43213 NM_133462 ENSG00000163728 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding chr20-410 chr20 59940134 59940344 + 11.7 0.000 promoter-TSS (NM_022106) promoter-TSS (NM_022106) 66 NM_006242 5509 Hs.42215 NM_006242 ENSG00000132825 PPP1R3D PPP1R6 protein phosphatase 1 regulatory subunit 3D protein-coding chr12-1814 chr12 6960664 6960874 + 11.7 0.000 exon (NM_080549, exon 15 of 16) exon (NM_080549, exon 15 of 16) -2476 NR_135032 105369635 Hs.744442 NR_135032 ENSG00000257084 MIR200CHG U47924.27 MIR200C and MIR141 host gene ncRNA chr9-2598 chr9 4167096 4167306 + 11.7 0.000 intron (NM_001042413, intron 2 of 10) MIR3|SINE|MIR -15018 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr8-5521 chr8 64886794 64887004 + 11.7 0.000 Intergenic Intergenic -88162 NM_004820 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr5-3286 chr5 116035790 116036000 + 11.7 0.000 Intergenic LTR50|LTR|ERVL -15571 NM_001195581 644100 Hs.98288 NM_001195581 ENSG00000268223 ARL14EPL - ADP ribosylation factor like GTPase 14 effector protein like protein-coding chr1-3974 chr1 154561999 154562209 + 11.7 0.000 Intergenic AluSx1|SINE|Alu -3442 NM_017582 55585 Hs.607928 NM_017582 ENSG00000160714 UBE2Q1 GTAP|NICE-5|NICE5|PRO3094|UBE2Q ubiquitin conjugating enzyme E2 Q1 protein-coding chr10-3151 chr10 69954186 69954396 + 11.7 0.000 intron (NM_001368897, intron 32 of 33) intron (NM_001368897, intron 32 of 33) -98555 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr10-2166 chr10 122147709 122147919 + 11.7 0.000 intron (NM_206862, intron 7 of 22) intron (NM_206862, intron 7 of 22) -15816 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr9-4425 chr9 12640110 12640320 + 11.7 0.000 Intergenic Intergenic -53170 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr4-5967 chr4 173456865 173457075 + 11.7 0.000 intron (NM_001329597, intron 2 of 3) intron (NM_001329597, intron 2 of 3) -57854 NM_007281 11341 Hs.7122 NM_007281 ENSG00000164106 SCRG1 SCRG-1 stimulator of chondrogenesis 1 protein-coding chr12-4892 chr12 65297499 65297709 + 11.7 0.000 intron (NM_001193461, intron 1 of 6) intron (NM_001193461, intron 1 of 6) 18617 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr3-1321 chr3 46558380 46558590 + 11.7 0.000 intron (NR_073385, intron 2 of 2) L1MEf|LINE|L1 1087 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr2-1093 chr2 9003464 9003674 + 11.7 0.000 non-coding (NR_135601, exon 1 of 11) non-coding (NR_135601, exon 1 of 11) 115 NR_135600 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr3-3568 chr3 52401327 52401537 + 11.7 0.000 TTS (NM_015512) TTS (NM_015512) 8576 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr17-1733 chr17 78337345 78337555 + 11.7 0.000 Intergenic Intergenic 22629 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr19-1168 chr19 4722861 4723071 + 11.7 0.000 intron (NM_139159, intron 1 of 21) intron (NM_139159, intron 1 of 21) 876 NM_139159 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr8-3363 chr8 47683122 47683332 + 11.7 0.000 intron (NR_148204, intron 11 of 19) intron (NR_148204, intron 11 of 19) 23563 NM_001352960 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr3-4253 chr3 143793950 143794160 + 11.7 0.000 intron (NM_173653, intron 4 of 15) intron (NM_173653, intron 4 of 15) 54413 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding GL000225.1-86 GL000225.1 11577 11787 + 11.7 0.000 NA NA NA NA chr1-6667 chr1 49164563 49164773 + 11.7 0.000 intron (NM_001323575, intron 4 of 12) MIRc|SINE|MIR -92743 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr2-6641 chr2 1933453 1933663 + 11.7 0.000 intron (NM_015025, intron 9 of 24) intron (NM_015025, intron 9 of 24) -189043 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr5-6962 chr5 142743899 142744109 + 11.7 0.000 Intergenic Intergenic -1596 NR_110558 101926975 Hs.638583 NR_110558 ENSG00000236714 LINC01844 - long intergenic non-protein coding RNA 1844 ncRNA chr14-2031 chr14 61547555 61547765 + 11.7 0.000 intron (NM_006255, intron 12 of 13) intron (NM_006255, intron 12 of 13) 22534 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr22-4212 chr22 46315617 46315827 + 11.7 0.000 intron (NM_016426, intron 6 of 11) intron (NM_016426, intron 6 of 11) 18852 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding chr22-2271 chr22 31712167 31712377 + 11.7 0.000 exon (NM_173566, exon 4 of 9) exon (NM_173566, exon 4 of 9) 37860 NM_173566 253143 Hs.438906 NM_173566 ENSG00000183530 PRR14L C22orf30 proline rich 14 like protein-coding chr10-4682 chr10 132304732 132304942 + 11.7 0.000 intron (NM_001318878, intron 1 of 11) intron (NM_001318878, intron 1 of 11) 2385 NM_001318879 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr11-3705 chr11 8793295 8793505 + 11.7 0.000 intron (NR_120590, intron 4 of 4) L1MB4|LINE|L1 17274 NM_213618 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr3-3176 chr3 180913543 180913753 + 11.7 0.000 intron (NM_005087, intron 1 of 16) intron (NM_005087, intron 1 of 16) 977 NM_001363882 8087 Hs.478407 NM_005087 ENSG00000114416 FXR1 FXR1P FMR1 autosomal homolog 1 protein-coding chr1-5322 chr1 225811630 225811840 + 11.7 0.000 intron (NM_001291163, intron 1 of 8) intron (NM_001291163, intron 1 of 8) 1601 NM_001291163 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr22-1200 chr22 22043423 22043633 + 11.7 0.000 intron (NR_135291, intron 1 of 6) intron (NR_135291, intron 1 of 6) 406 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr8-422 chr8 26449563 26449773 + 11.7 0.000 Intergenic CpG 59255 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr4-2280 chr4 187602849 187603059 + 11.7 0.000 intron (NR_110436, intron 2 of 2) intron (NR_110436, intron 2 of 2) 69687 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LINC02492 - long intergenic non-protein coding RNA 2492 ncRNA chr15-1514 chr15 55282386 55282596 + 11.7 0.000 intron (NM_183235, intron 1 of 6) intron (NM_183235, intron 1 of 6) 7322 NM_183235 5873 Hs.654978 NM_004580 ENSG00000069974 RAB27A GS2|HsT18676|RAB27|RAM RAB27A, member RAS oncogene family protein-coding chr11-4077 chr11 22738178 22738388 + 11.7 0.000 intron (NM_005256, intron 4 of 6) intron (NM_005256, intron 4 of 6) 63509 NM_005256 2620 Hs.711297 NM_005256 ENSG00000148935 GAS2 GAS-2 growth arrest specific 2 protein-coding chr20-2060 chr20 9935742 9935952 + 11.7 0.000 Intergenic L1PB1|LINE|L1 -50486 NR_109861 101929371 Hs.619265 NR_109861 PARAL1 - PPARG activating RBM14 associated lncRNA 1 ncRNA chr9-2320 chr9 6110144 6110354 + 11.7 0.000 Intergenic Intergenic -94625 NM_012416 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr6-1132 chr6 150857203 150857413 + 11.7 0.000 Intergenic LTR10E|LTR|ERV1 -8371 NR_146719 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr19-2069 chr19 17866729 17866939 + 11.7 0.000 Intergenic Intergenic 4246 NR_000012 26780 Hs.684118 NR_000012 ENSG00000207166 SNORA68 RNU68|SNORA68A|U68 small nucleolar RNA, H/ACA box 68 snoRNA chr1-4396 chr1 181088371 181088581 + 11.7 0.000 promoter-TSS (NM_016545) promoter-TSS (NM_016545) -224 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr13-1448 chr13 72649478 72649688 + 11.7 0.000 Intergenic Intergenic 78046 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr1-14249 chr1 36663821 36664031 + 11.7 0.000 Intergenic Intergenic -180612 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr7-1671 chr7 105149902 105150112 + 11.7 0.000 intron (NM_182692, intron 7 of 15) intron (NM_182692, intron 7 of 15) 119070 NM_001350739 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr1-2990 chr1 192551065 192551275 + 11.7 0.000 Intergenic Intergenic -24603 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G protein signaling 1 protein-coding chr1-5833 chr1 228045099 228045309 + 11.7 0.000 intron (NM_033131, intron 2 of 3) intron (NM_033131, intron 2 of 3) 31346 NR_158166 100506571 NR_158166 LINC02809 - long intergenic non-protein coding RNA 2809 ncRNA chr3-2632 chr3 4416924 4417134 + 11.7 0.000 intron (NM_001164674, intron 5 of 7) intron (NM_001164674, intron 5 of 7) 50240 NM_182760 285362 Hs.350475 NM_182760 ENSG00000144455 SUMF1 AAPA3037|FGE|UNQ3037 sulfatase modifying factor 1 protein-coding chr8-1685 chr8 55881441 55881651 + 11.7 0.000 intron (NM_002350, intron 1 of 12) intron (NM_002350, intron 1 of 12) 1711 NM_001111097 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chr9-4844 chr9 238235 238445 + 11.7 0.000 intron (NM_203447, intron 1 of 47) intron (NM_203447, intron 1 of 47) -22590 NR_160804 157983 Hs.190877 NM_152569 ENSG00000183784 DOCK8-AS1 C9orf66 DOCK8 antisense RNA 1 ncRNA chrX-746 chrX 14555916 14556126 + 11.7 0.000 intron (NM_001118886, intron 2 of 8) L2c|LINE|L2 26485 NM_001118886 2742 Hs.2700 NM_002063 ENSG00000101958 GLRA2 GLR glycine receptor alpha 2 protein-coding chr14-1020 chr14 33647592 33647802 + 11.7 0.000 intron (NM_001165893, intron 4 of 10) intron (NM_001165893, intron 4 of 10) -61240 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr1-11218 chr1 245025903 245026113 + 11.7 0.000 intron (NM_032328, intron 3 of 7) THE1B|LTR|ERVL-MaLR -55139 NR_111907 101928068 Hs.134857 NR_111907 LOC101928068 - uncharacterized LOC101928068 ncRNA chr2-4066 chr2 121711583 121711793 + 11.7 0.000 intron (NR_037857, intron 3 of 3) intron (NR_037857, intron 3 of 3) 25187 NM_032390 84365 Hs.367842 NM_032390 ENSG00000155438 NIFK MKI67IP|Nopp34 nucleolar protein interacting with the FHA domain of MKI67 protein-coding chr14-4181 chr14 84145710 84145920 + 11.7 0.000 Intergenic LTR16E1|LTR|ERVL -1126117 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr7-7643 chr7 140232631 140232841 + 11.7 0.000 Intergenic AluSx1|SINE|Alu 55475 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr3-2368 chr3 169847821 169848031 + 11.7 0.000 intron (NM_001277127, intron 8 of 8) intron (NM_001277127, intron 8 of 8) 22009 NM_001277127 79782 Hs.411295 NM_024727 ENSG00000114248 LRRC31 HEL-S-293 leucine rich repeat containing 31 protein-coding chr1-6198 chr1 205586055 205586265 + 11.7 0.000 exon (NM_181644, exon 6 of 10) exon (NM_181644, exon 6 of 10) -16855 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr7-2804 chr7 90453119 90453329 + 11.7 0.000 Intergenic Intergenic -16415 NM_001365443 102723899 Hs.731917 NM_001365443 LOC102723899 - uncharacterized LOC102723899 protein-coding chr2-2977 chr2 36418766 36418976 + 11.7 0.000 intron (NM_016441, intron 2 of 16) MIRc|SINE|MIR 63093 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chrX-608 chrX 153510678 153510888 + 11.7 0.000 Intergenic Intergenic -15318 NR_073156 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr18-486 chr18 8141152 8141362 + 11.7 0.000 intron (NM_002845, intron 13 of 30) intron (NM_002845, intron 13 of 30) 225777 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr9-4631 chr9 111608809 111609019 + 11.7 0.000 intron (NR_034087, intron 2 of 2) intron (NR_034087, intron 2 of 2) 4639 NR_034087 652972 Hs.551134 NM_001037807 ENSG00000204173 LRRC37A5P C9orf29 leucine rich repeat containing 37 member A5, pseudogene pseudo chr7-4950 chr7 139798016 139798226 + 11.7 0.000 TTS (NR_159365) TTS (NR_159365) 19879 NM_001130966 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr1-10186 chr1 111445282 111445492 + 11.7 0.000 intron (NM_001317064, intron 2 of 7) intron (NM_001317064, intron 2 of 7) 3869 NM_024102 79084 Hs.204773 NM_024102 ENSG00000116455 WDR77 HKMT1069|MEP-50|MEP50|Nbla10071|p44|p44/Mep50 WD repeat domain 77 protein-coding chr15-1983 chr15 41727308 41727518 + 11.7 0.000 intron (NM_001164273, intron 10 of 23) intron (NM_001164273, intron 10 of 23) 35828 NR_030356 693211 NR_030356 ENSG00000207766 MIR626 MIRN626|hsa-mir-626 microRNA 626 ncRNA chr1-8459 chr1 110614085 110614295 + 11.7 0.000 intron (NM_001204269, intron 1 of 4) L3|LINE|CR1 -7832 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr9-3506 chr9 23490181 23490391 + 11.7 0.000 Intergenic L2a|LINE|L2 182113 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr1-6580 chr1 35190673 35190883 + 11.7 0.000 non-coding (NR_136702, exon 3 of 12) non-coding (NR_136702, exon 3 of 12) 2367 NR_136702 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr3-1131 chr3 9915135 9915345 + 11.7 0.000 intron (NM_153483, intron 16 of 16) CpG -1834 NM_001203264 84818 Hs.129959 NM_032732 ENSG00000163702 IL17RC CANDF9|IL17-RL|IL17RL interleukin 17 receptor C protein-coding chr16-3512 chr16 23072051 23072261 + 11.7 0.000 exon (NM_020718, exon 15 of 16) exon (NM_020718, exon 15 of 16) 77114 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr3-9920 chr3 87125533 87125743 + 11.7 0.000 intron (NR_104153, intron 1 of 2) intron (NR_104153, intron 1 of 2) 36358 NR_047469 100846978 Hs.570649 NR_047469 ENSG00000281392 LINC00506 - long intergenic non-protein coding RNA 506 ncRNA chr10-1905 chr10 123027885 123028095 + 11.7 0.000 intron (NM_001609, intron 1 of 10) LTR45B|LTR|ERV1 18984 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chr4-8440 chr4 154612982 154613192 + 11.7 0.000 promoter-TSS (NM_021870) promoter-TSS (NM_021870) -279 NM_000509 2266 Hs.727584 NM_000509 ENSG00000171557 FGG - fibrinogen gamma chain protein-coding chr19-1709 chr19 33798749 33798959 + 11.7 0.000 intron (NM_001129994, intron 2 of 6) intron (NM_001129994, intron 2 of 6) 1984 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr6-4610 chr6 44707533 44707743 + 11.7 0.000 Intergenic Intergenic -155757 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr6-2142 chr6 11209814 11210024 + 11.7 0.000 intron (NM_182966, intron 2 of 2) intron (NM_182966, intron 2 of 2) 22749 NM_006403 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr2-5721 chr2 216368333 216368543 + 11.7 0.000 intron (NM_020814, intron 1 of 3) intron (NM_020814, intron 1 of 3) 4045 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr14-3319 chr14 87335233 87335443 + 11.7 0.000 Intergenic Intergenic 319956 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr2-1374 chr2 20291085 20291295 + 11.7 0.000 intron (NM_001282790, intron 8 of 18) intron (NM_001282790, intron 8 of 18) 36196 NM_001282790 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr2-7774 chr2 40838052 40838262 + 11.7 0.000 Intergenic Intergenic -325722 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr17-1992 chr17 76682064 76682274 + 11.7 0.000 intron (NM_198530, intron 3 of 3) intron (NM_198530, intron 3 of 3) 6494 NM_001363769 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr2-1463 chr2 43226610 43226820 + 11.7 0.000 promoter-TSS (NR_027251) promoter-TSS (NR_027251) -109 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein like 2 protein-coding chr6-4712 chr6 57224911 57225121 + 11.7 0.000 Intergenic MER34A|LTR|ERV1 -2702 NR_103822 51715 Hs.555016 NM_016277 ENSG00000112210 RAB23 HSPC137 RAB23, member RAS oncogene family protein-coding chr5-2236 chr5 8247495 8247705 + 11.7 0.000 Intergenic Intergenic 209964 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr22-1665 chr22 42537243 42537453 + 11.7 0.000 Intergenic MamRep605|LTR?|LTR? -16608 NM_001284334 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr9-2199 chr9 134515500 134515710 + 11.7 0.000 Intergenic L2a|LINE|L2 109045 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr12-1810 chr12 6465552 6465762 + 11.7 0.000 intron (NR_123717, intron 2 of 3) intron (NR_123717, intron 2 of 3) 5020 NR_123717 6843 Hs.20021 NM_014231 ENSG00000139190 VAMP1 CMS25|SPAX1|SYB1|VAMP-1 vesicle associated membrane protein 1 protein-coding chr13-1168 chr13 37475995 37476205 + 11.7 0.000 Intergenic Intergenic 8684 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chr1-7333 chr1 3558147 3558357 + 11.7 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) 2538 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr6-2793 chr6 145836899 145837109 + 11.7 0.000 intron (NR_038246, intron 2 of 2) L4_C_Mam|LINE|RTE-X 22128 NR_038245 100507557 Hs.124537 NR_038244 ENSG00000235652 LOC100507557 - uncharacterized LOC100507557 ncRNA KI270819.1-1 KI270819.1 85120 85330 + 11.7 0.000 NA NA NA NA chr7-1422 chr7 35709529 35709739 + 11.7 0.000 Intergenic Intergenic -6803 NR_108083 100506725 Hs.304253 NR_108082 ENSG00000227544 LOC100506725 - uncharacterized LOC100506725 ncRNA chr17-5137 chr17 7897888 7898098 + 11.7 0.000 exon (NM_001005271, exon 12 of 40) exon (NM_001005271, exon 12 of 40) -8130 NR_003000 677763 NR_003000 ENSG00000252835 SCARNA21 ACA68|SCARNA21A small Cajal body-specific RNA 21 ncRNA chr7-7946 chr7 10788651 10788861 + 11.7 0.000 Intergenic L1MC1|LINE|L1 -8812 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA chr6-2044 chr6 75524432 75524642 + 11.7 0.000 Intergenic Intergenic -30737 NR_110608 27145 Hs.201488 NM_015687 ENSG00000118407 FILIP1 FILIP filamin A interacting protein 1 protein-coding chr12-2086 chr12 15896893 15897103 + 11.7 0.000 intron (NM_007178, intron 6 of 9) intron (NM_007178, intron 6 of 9) -14334 NM_015954 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr15-5227 chr15 96744325 96744535 + 11.7 0.000 Intergenic Intergenic 37224 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr7-3157 chr7 77873982 77874192 + 11.7 0.000 intron (NM_001366089, intron 2 of 18) HERVL-int|LTR|ERVL 33957 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr2-13454 chr2 145110729 145110939 + 11.7 0.000 Intergenic MamTip2|DNA|hAT-Tip100 442867 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr7-3169 chr7 96465449 96465659 + 11.7 0.000 Intergenic Intergenic 37969 NR_163949 chr7-3492 chr7 2715324 2715534 + 11.7 0.000 3' UTR (NM_001284355, exon 6 of 6) 3' UTR (NM_001284355, exon 6 of 6) 27227 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr11-7905 chr11 130528021 130528231 + 11.7 0.000 Intergenic Intergenic 79152 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr7-2178 chr7 77772363 77772573 + 11.7 0.000 intron (NM_198467, intron 5 of 7) intron (NM_198467, intron 5 of 7) 25966 NM_032936 85025 Hs.19025 NM_032936 ENSG00000135211 TMEM60 C7orf35|DC32 transmembrane protein 60 protein-coding chr4-3926 chr4 159032123 159032333 + 11.7 0.000 intron (NM_152543, intron 1 of 4) AluSx3|SINE|Alu 3001 NM_152543 152940 Hs.415576 NM_152543 ENSG00000164123 C4orf45 - chromosome 4 open reading frame 45 protein-coding chr3-2495 chr3 156677550 156677760 + 11.7 0.000 intron (NM_001184718, intron 1 of 5) intron (NM_001184718, intron 1 of 5) 991 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr10-1072 chr10 132943247 132943457 + 11.7 0.000 promoter-TSS (NM_001200049) promoter-TSS (NM_001200049) -782 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr16-1751 chr16 85525285 85525495 + 11.7 0.000 Intergenic Intergenic -86019 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr9-3700 chr9 106988985 106989195 + 11.7 0.000 intron (NM_001347997, intron 10 of 12) L1PB1|LINE|L1 113898 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr7-6337 chr7 147151018 147151228 + 11.7 0.000 intron (NM_014141, intron 7 of 22) intron (NM_014141, intron 7 of 22) -53514 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr16-3118 chr16 70576515 70576725 + 11.7 0.000 3' UTR (NM_012426, exon 26 of 26) 3' UTR (NM_012426, exon 26 of 26) -3275 NM_152456 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr9-2180 chr9 131297956 131298166 + 11.7 0.000 intron (NM_032728, intron 1 of 1) L1ME4a|LINE|L1 8338 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr3-9420 chr3 48614219 48614429 + 11.7 0.000 Intergenic L2|LINE|L2 -4678 NM_003365 7384 Hs.119251 NM_003365 ENSG00000010256 UQCRC1 D3S3191|QCR1|UQCR1 ubiquinol-cytochrome c reductase core protein 1 protein-coding chr20-1100 chr20 63850883 63851093 + 11.7 0.000 Intergenic Intergenic -10225 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chrX-792 chrX 51802893 51803103 + 11.7 0.000 promoter-TSS (NM_001005332) promoter-TSS (NM_001005332) -78 NM_001005332 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr6-2161 chr6 17768557 17768767 + 11.7 0.000 intron (NM_001105567, intron 36 of 36) intron (NM_001105567, intron 36 of 36) 61619 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr2-7473 chr2 15637311 15637521 + 11.7 0.000 Intergenic Intergenic 45548 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr2-1894 chr2 113240162 113240372 + 11.7 0.000 non-coding (NR_047570, exon 3 of 3) non-coding (NR_047570, exon 3 of 3) 3998 NR_015377 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr1-4939 chr1 48048115 48048325 + 11.7 0.000 Intergenic L2b|LINE|L2 -50835 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr15-1879 chr15 65423645 65423855 + 11.7 0.000 promoter-TSS (NM_020962) promoter-TSS (NM_020962) -803 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr12-1549 chr12 101698813 101699023 + 11.7 0.000 intron (NM_020244, intron 1 of 8) intron (NM_020244, intron 1 of 8) 1278 NM_020244 56994 Hs.293077 NM_020244 ENSG00000111666 CHPT1 CPT|CPT1 choline phosphotransferase 1 protein-coding chr4-3491 chr4 136526644 136526854 + 11.7 0.000 Intergenic Intergenic -613069 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr5-2825 chr5 40677009 40677219 + 11.7 0.000 Intergenic Intergenic -2801 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr10-5249 chr10 66885225 66885435 + 11.7 0.000 intron (NM_001127384, intron 7 of 17) intron (NM_001127384, intron 7 of 17) -40706 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr1-6323 chr1 3151832 3152042 + 11.7 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 23962 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr2-4457 chr2 217822407 217822617 + 11.7 0.000 intron (NM_001308023, intron 19 of 29) intron (NM_001308023, intron 19 of 29) 11221 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr14-2428 chr14 68713930 68714140 + 11.7 0.000 Intergenic Intergenic 79879 NM_004926 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr4-3877 chr4 139901046 139901256 + 11.7 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -226864 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr12-1109 chr12 6868044 6868254 + 11.7 0.000 promoter-TSS (NM_001258026) promoter-TSS (NM_001258026) 35 NM_001258026 7167 Hs.524219 NM_000365 ENSG00000111669 TPI1 HEL-S-49|TIM|TPI|TPID triosephosphate isomerase 1 protein-coding chr14-1444 chr14 92472047 92472257 + 11.7 0.000 intron (NM_153647, intron 13 of 17) MER74A|LTR|ERVL -41629 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr4-2561 chr4 86856993 86857203 + 11.7 0.000 Intergenic Intergenic -7714 NM_197965 345274 Hs.452996 NM_197965 ENSG00000145283 SLC10A6 SOAT solute carrier family 10 member 6 protein-coding chr11-2189 chr11 12402200 12402410 + 11.7 0.000 intron (NM_018222, intron 1 of 12) LTR33|LTR|ERVL 24734 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr19-2062 chr19 10724479 10724689 + 11.7 0.000 intron (NM_001005362, intron 1 of 19) L2a|LINE|L2 6180 NR_030368 693223 NR_030368 ENSG00000207972 MIR638 MIRN638|hsa-mir-638 microRNA 638 ncRNA chr1-4270 chr1 3600042 3600252 + 11.7 0.000 intron (NM_001409, intron 2 of 36) intron (NM_001409, intron 2 of 36) 11361 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chr19-1050 chr19 58059301 58059511 + 11.7 0.000 intron (NM_007134, intron 1 of 3) CpG 124 NM_003436 7694 Hs.85863 NM_003436 ENSG00000176293 ZNF135 ZNF61|ZNF78L1|pHZ-17|pT3 zinc finger protein 135 protein-coding chr9-2994 chr9 86903979 86904189 + 11.7 0.000 Intergenic Intergenic 43422 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr12-2535 chr12 100043801 100044011 + 11.7 0.000 intron (NM_015054, intron 19 of 20) LTR79|LTR|ERVL -59252 NM_001352186 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr2-2768 chr2 229468973 229469183 + 11.7 0.000 intron (NM_139072, intron 7 of 12) intron (NM_139072, intron 7 of 12) -197791 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr20-2168 chr20 44426127 44426337 + 11.7 0.000 intron (NM_001287183, intron 9 of 10) L2b|LINE|L2 18112 NR_037419 100500813 NR_037419 ENSG00000266151 MIR3646 - microRNA 3646 ncRNA chr12-3435 chr12 111532843 111533053 + 11.7 0.000 intron (NR_132311, intron 5 of 23) intron (NR_132311, intron 5 of 23) 66367 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr7-6302 chr7 139899717 139899927 + 11.7 0.000 intron (NM_001314028, intron 3 of 12) intron (NM_001314028, intron 3 of 12) 70558 NM_001166253 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr6-5030 chr6 111291164 111291374 + 11.7 0.000 Intergenic THE1B|LTR|ERVL-MaLR 31930 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr17-2771 chr17 1881324 1881534 + 11.7 0.000 intron (NM_001355120, intron 12 of 16) intron (NM_001355120, intron 12 of 16) 51424 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr12-3090 chr12 14384885 14385095 + 11.7 0.000 promoter-TSS (NM_181352) promoter-TSS (NM_181352) -291 NM_181352 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr6-2511 chr6 147933408 147933618 + 11.7 0.000 Intergenic MIR3|SINE|MIR -338815 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr1-4942 chr1 49271671 49271881 + 11.7 0.000 intron (NR_136623, intron 2 of 12) LTR49-int|LTR|ERV1 14365 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr9-3177 chr9 125561659 125561869 + 11.7 0.000 intron (NM_001006619, intron 5 of 10) MIRb|SINE|MIR 145444 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr9-3491 chr9 16023482 16023692 + 11.7 0.000 Intergenic Intergenic 229520 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chrX-1111 chrX 18447398 18447608 + 11.7 0.000 intron (NM_001037343, intron 2 of 21) L2|LINE|L2 5279 NM_001037343 6792 Hs.659851 NM_003159 ENSG00000008086 CDKL5 CFAP247|EIEE2|ISSX|STK9 cyclin dependent kinase like 5 protein-coding chr19-1513 chr19 945505 945715 + 11.7 0.000 intron (NM_005224, intron 3 of 8) intron (NM_005224, intron 3 of 8) 19575 NM_005224 1820 Hs.501296 NM_005224 ENSG00000116017 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT-rich interaction domain 3A protein-coding chr9-3906 chr9 134483335 134483545 + 11.7 0.000 Intergenic Intergenic 76880 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr1-2498 chr1 173473573 173473783 + 11.7 0.000 intron (NR_037845, intron 1 of 2) intron (NR_037845, intron 1 of 2) 3477 NR_037845 100506023 Hs.731284 NR_037845 LOC100506023 - uncharacterized LOC100506023 ncRNA chr15-954 chr15 40047865 40048075 + 11.7 0.000 intron (NR_040060, intron 2 of 2) intron (NR_040060, intron 2 of 2) 8659 NR_040062 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr6-935 chr6 105136561 105136771 + 11.7 0.000 promoter-TSS (NM_007073) promoter-TSS (NM_007073) 2 NM_007073 11149 Hs.221660 NM_007073 ENSG00000112276 BVES CARICK|HBVES|LGMD2X|LGMDR25|POP1|POPDC1 blood vessel epicardial substance protein-coding chr4-2998 chr4 122346106 122346316 + 11.7 0.000 intron (NM_015312, intron 72 of 83) intron (NM_015312, intron 72 of 83) -32800 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding chr10-2405 chr10 125126865 125127075 + 11.7 0.000 intron (NM_001083914, intron 1 of 10) intron (NM_001083914, intron 1 of 10) 31807 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr19-2255 chr19 52139128 52139338 + 11.7 0.000 intron (NM_178523, intron 1 of 3) intron (NM_178523, intron 1 of 3) 705 NM_178523 90317 Hs.645225 NM_178523 ENSG00000204611 ZNF616 - zinc finger protein 616 protein-coding chr9-904 chr9 34654572 34654782 + 11.7 0.000 intron (NR_052010, intron 1 of 12) intron (NR_052010, intron 1 of 12) 780 NR_052010 3590 Hs.591088 NM_004512 ENSG00000137070 IL11RA CRSDA interleukin 11 receptor subunit alpha protein-coding chr5-952 chr5 109689854 109690064 + 11.7 0.000 5' UTR (NM_002372, exon 1 of 22) 5' UTR (NM_002372, exon 1 of 22) 593 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr12-2512 chr12 89544862 89545072 + 11.7 0.000 Intergenic LTR33|LTR|ERVL -18705 NM_001199782 100528030 Hs.25130 NM_001199781 ENSG00000259075 POC1B-GALNT4 GALNT4|GalNAc-T4 POC1B-GALNT4 readthrough protein-coding chrX-1321 chrX 131402340 131402550 + 11.7 0.000 Intergenic MIR3|SINE|MIR -113016 NM_001170961 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr19-4101 chr19 16244007 16244217 + 11.7 0.000 3' UTR (NM_001130524, exon 13 of 13) 3' UTR (NM_001130524, exon 13 of 13) 46201 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr9-2486 chr9 85522602 85522812 + 11.7 0.000 Intergenic CpG 219322 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr7-5634 chr7 54647375 54647585 + 11.7 0.000 Intergenic MER4D1|LTR|ERV1 90510 NR_038994 285878 Hs.335933 NR_038994 ENSG00000224223 VSTM2A-OT1 GS1-18A18.1 VSTM2A overlapping transcript 1 ncRNA chr1-6810 chr1 90167344 90167554 + 11.7 0.000 Intergenic L1PA5|LINE|L1 172339 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr20-1732 chr20 44286745 44286955 + 11.7 0.000 Intergenic L1M1|LINE|L1 24352 NM_001080472 128486 Hs.632269 NM_001080472 ENSG00000197296 FITM2 C20orf142|Fit2|dJ881L22.2 fat storage inducing transmembrane protein 2 protein-coding chr4-3180 chr4 3136521 3136731 + 11.7 0.000 intron (NM_002111, intron 21 of 66) L1ME4a|LINE|L1 61945 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr6-3167 chr6 119802533 119802743 + 11.7 0.000 intron (NR_134600, intron 2 of 3) intron (NR_134600, intron 2 of 3) -212541 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr14-815 chr14 100175649 100175859 + 11.7 0.000 Intergenic Intergenic -16109 NM_206918 123099 Hs.159643 NM_206918 ENSG00000168350 DEGS2 C14orf66|DES2|FADS8 delta 4-desaturase, sphingolipid 2 protein-coding chr5-3492 chr5 173050888 173051098 + 11.7 0.000 Intergenic Intergenic -5359 NM_153607 153222 Hs.484195 NM_153607 ENSG00000164463 CREBRF C5orf41|LRF CREB3 regulatory factor protein-coding chr2-9710 chr2 57833218 57833428 + 11.7 0.000 Intergenic L1ME4a|LINE|L1 -74328 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr6-1800 chr6 129318429 129318639 + 11.7 0.000 intron (NM_000426, intron 27 of 64) intron (NM_000426, intron 27 of 64) 391643 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr3-2264 chr3 57556763 57556973 + 11.7 0.000 exon (NM_001322177, exon 1 of 2) exon (NM_001322177, exon 1 of 2) 594 NM_001322177 201626 Hs.572993 NM_177966 ENSG00000174840 PDE12 2'-PDE|2-PDE phosphodiesterase 12 protein-coding chr17-3562 chr17 79095676 79095886 + 11.7 0.000 intron (NM_001082575, intron 12 of 14) intron (NM_001082575, intron 12 of 14) 20844 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr9-2810 chr9 123417850 123418060 + 11.7 0.000 intron (NM_001352968, intron 18 of 18) intron (NM_001352968, intron 18 of 18) -15352 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr12-2928 chr12 69027555 69027765 + 11.7 0.000 Intergenic Intergenic -64420 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr15-703 chr15 80333084 80333294 + 11.7 0.000 intron (NR_033833, intron 1 of 2) intron (NR_033833, intron 1 of 2) 8616 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA chr3-4304 chr3 160641652 160641862 + 11.7 0.000 Intergenic Intergenic -35403 NM_025047 80117 Hs.287702 NM_025047 ENSG00000179674 ARL14 ARF7 ADP ribosylation factor like GTPase 14 protein-coding chr1-3275 chr1 223680004 223680214 + 11.7 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -14408 NM_001143962 388743 Hs.291487 NM_001143962 ENSG00000203697 CAPN8 nCL-2 calpain 8 protein-coding chr6-5541 chr6 168540639 168540849 + 11.7 0.000 intron (NM_001166412, intron 4 of 12) intron (NM_001166412, intron 4 of 12) 99560 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr17-1505 chr17 40054257 40054467 + 11.7 0.000 promoter-TSS (NM_001330211) promoter-TSS (NM_001330211) 46 NM_001267797 9862 Hs.462983 NM_014815 ENSG00000008838 MED24 ARC100|CRSP100|CRSP4|DRIP100|MED5|THRAP4|TRAP100 mediator complex subunit 24 protein-coding chr12-3047 chr12 4418035 4418245 + 11.7 0.000 Intergenic Intergenic 27474 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr12-1668 chr12 57905497 57905707 + 11.7 0.000 Intergenic Intergenic -9120 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr5-2546 chr5 173781451 173781661 + 11.7 0.000 Intergenic Intergenic 9386 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr12-2107 chr12 53995619 53995829 + 11.7 0.000 intron (NR_047505, intron 2 of 2) CpG 1061 NR_047505 100874364 NR_047505 ENSG00000250133 HOXC-AS2 - HOXC cluster antisense RNA 2 ncRNA chr3-3263 chr3 59818254 59818464 + 11.7 0.000 intron (NM_001354590, intron 7 of 8) intron (NM_001354590, intron 7 of 8) -159862 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr2-3496 chr2 204169357 204169567 + 11.7 0.000 Intergenic MIR|SINE|MIR 232714 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr3-4148 chr3 123307789 123307999 + 11.7 0.000 intron (NM_183357, intron 12 of 20) intron (NM_183357, intron 12 of 20) 105951 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr2-5591 chr2 176664370 176664580 + 11.7 0.000 Intergenic Intergenic 26721 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr7-4235 chr7 1199760 1199970 + 11.7 0.000 Intergenic AluSx1|SINE|Alu -33007 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr12-2807 chr12 111004312 111004522 + 11.7 0.000 Intergenic LTR33|LTR|ERVL -29748 NM_015267 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr1-7166 chr1 207649779 207649989 + 11.7 0.000 intron (NM_175710, intron 1 of 11) L2b|LINE|L2 4751 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr16-3054 chr16 56593191 56593401 + 11.7 0.000 Intergenic L1MB2|LINE|L1 3768 NM_005954 4504 Hs.73133 NM_005954 ENSG00000087250 MT3 GIF|GIFB|GRIF|ZnMT3 metallothionein 3 protein-coding chr8-1179 chr8 37467907 37468117 + 11.7 0.000 intron (NR_121620, intron 3 of 6) intron (NR_121620, intron 3 of 6) 25901 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr12-4312 chr12 127355169 127355379 + 11.7 0.000 Intergenic Intergenic -15202 NR_110057 101927616 Hs.637827 NR_110057 ENSG00000256362 LINC02375 - long intergenic non-protein coding RNA 2375 ncRNA chr1-4250 chr1 226702501 226702711 + 11.7 0.000 intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) -27538 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr11-3475 chr11 77729028 77729238 + 11.7 0.000 intron (NM_016578, intron 4 of 15) intron (NM_016578, intron 4 of 15) -91327 NM_001311199 1207 Hs.430733 NM_001293 ENSG00000074201 CLNS1A CLCI|CLNS1B|ICln chloride nucleotide-sensitive channel 1A protein-coding chr6-1686 chr6 12354592 12354802 + 11.7 0.000 Intergenic Intergenic 64336 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr12-1351 chr12 12714350 12714560 + 11.7 0.000 Intergenic Intergenic -2815 NM_004064 1027 Hs.238990 NM_004064 ENSG00000111276 CDKN1B CDKN4|KIP1|MEN1B|MEN4|P27KIP1 cyclin dependent kinase inhibitor 1B protein-coding chr17-3004 chr17 75323111 75323321 + 11.7 0.000 intron (NM_203506, intron 3 of 4) intron (NM_203506, intron 3 of 4) -33767 NM_001126122 60386 Hs.514470 NM_021734 ENSG00000125454 SLC25A19 DNC|MCPHA|MUP1|THMD3|THMD4|TPC solute carrier family 25 member 19 protein-coding chr20-1257 chr20 38867871 38868081 + 11.7 0.000 intron (NM_015568, intron 2 of 10) intron (NM_015568, intron 2 of 10) -58441 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr3-670 chr3 52685695 52685905 + 11.7 0.000 promoter-TSS (NM_001350077) promoter-TSS (NM_001350077) 113 NM_001366074 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding chr4-609 chr4 6574954 6575164 + 11.7 0.000 promoter-TSS (NM_015274) promoter-TSS (NM_015274) -130 NM_001292038 23324 Hs.188464 NM_015274 ENSG00000013288 MAN2B2 - mannosidase alpha class 2B member 2 protein-coding chr2-4791 chr2 38432329 38432539 + 11.7 0.000 intron (NR_146454, intron 1 of 1) MER5B|DNA|hAT-Charlie 1140 NR_146454 100996902 Hs.128280 NR_146454 ENSG00000235009 LINC01883 - long intergenic non-protein coding RNA 1883 ncRNA chr19-1842 chr19 10660443 10660653 + 11.7 0.000 intron (NM_012218, intron 1 of 19) MIRc|SINE|MIR 6202 NM_004516 3609 Hs.465885 NM_004516 ENSG00000129351 ILF3 CBTF|DRBF|DRBP76|MMP4|MPHOSPH4|MPP4|MPP4110|NF-AT-90|NF110|NF110b|NF90|NF90a|NF90b|NF90c|NF90ctv|NFAR|NFAR-1|NFAR-2|NFAR110|NFAR2|NFAR90|TCP110|TCP80 interleukin enhancer binding factor 3 protein-coding chr2-1667 chr2 85584491 85584701 + 11.7 0.000 intron (NM_006634, intron 1 of 2) CpG 165 NM_006634 10791 Hs.534373 NM_006634 ENSG00000168899 VAMP5 - vesicle associated membrane protein 5 protein-coding chr12-1940 chr12 105445791 105446001 + 11.7 0.000 Intergenic Intergenic 115205 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr7-3921 chr7 127820378 127820588 + 11.7 0.000 intron (NM_014390, intron 11 of 23) intron (NM_014390, intron 11 of 23) 168289 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr6-4082 chr6 141875283 141875493 + 11.7 0.000 Intergenic LTR16D1|LTR|ERVL 213411 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr17-4892 chr17 70138556 70138766 + 11.7 0.000 Intergenic Intergenic 30741 NR_036534 400617 Hs.225661 NR_036534 ENSG00000267365 KCNJ2-AS1 - KCNJ2 antisense RNA 1 ncRNA chr3-4428 chr3 13236004 13236214 + 11.7 0.000 Intergenic Intergenic -162680 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr19-2263 chr19 55647735 55647945 + 11.7 0.000 promoter-TSS (NM_001370470) promoter-TSS (NM_001370470) -179 NM_001370469 29903 Hs.82482 NM_013301 ENSG00000173581 CCDC106 HSU79303|ZNF581 coiled-coil domain containing 106 protein-coding chr2-5825 chr2 232891604 232891814 + 11.7 0.000 intron (NM_001114090, intron 5 of 12) intron (NM_001114090, intron 5 of 12) 15877 NR_144372 389084 Hs.657509 NM_206895 ENSG00000182600 SNORC ASCL830|C2orf82|UNQ830 secondary ossification center associated regulator of chondrocyte maturation protein-coding chr16-5487 chr16 8321613 8321823 + 11.7 0.000 Intergenic MLT2B1|LTR|ERVL 268120 NM_001290095 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr6-1479 chr6 43702680 43702890 + 11.7 0.000 Intergenic Intergenic -14973 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr4-3950 chr4 173237309 173237519 + 11.7 0.000 intron (NM_017423, intron 1 of 11) intron (NM_017423, intron 1 of 11) -30746 NR_036093 100422849 NR_036093 ENSG00000221296 MIR548T - microRNA 548t ncRNA chr16-2048 chr16 66403480 66403690 + 11.7 0.000 3' UTR (NM_001795, exon 12 of 12) 3' UTR (NM_001795, exon 12 of 12) -4939 NR_046242 100505865 Hs.314372 NR_046242 LINC00920 - long intergenic non-protein coding RNA 920 ncRNA chr7-7406 chr7 73880568 73880778 + 11.7 0.000 Intergenic Intergenic 19514 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chrX-722 chrX 149274875 149275085 + 11.7 0.000 Intergenic Intergenic 230326 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr8-5211 chr8 114879412 114879622 + 11.7 0.000 Intergenic Intergenic 788496 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding KI270719.1-1 KI270719.1 169824 170034 + 11.7 0.000 NA NA NA NA chr8-2792 chr8 121324418 121324628 + 11.7 0.000 Intergenic Intergenic -314823 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr11-4292 chr11 67305642 67305852 + 11.7 0.000 intron (NM_017857, intron 3 of 13) intron (NM_017857, intron 3 of 13) 2217 NM_017857 54961 Hs.29173 NM_017857 ENSG00000172830 SSH3 SSH3L slingshot protein phosphatase 3 protein-coding chr10-2127 chr10 4243747 4243957 + 11.7 0.000 promoter-TSS (NR_108040) promoter-TSS (NR_108040) 60 NR_108040 100652988 Hs.433011 NR_108040 LINC00702 - long intergenic non-protein coding RNA 702 ncRNA chr15-2065 chr15 60407532 60407742 + 11.7 0.000 Intergenic Intergenic -9651 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr4-2421 chr4 118373841 118374051 + 11.7 0.000 Intergenic Intergenic -20943 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr21-686 chr21 17802717 17802927 + 11.7 0.000 intron (NM_001100420, intron 2 of 4) intron (NM_001100420, intron 2 of 4) -10313 NR_038870 246312 Hs.473425 NR_038870 ENSG00000240770 C21orf91-OT1 D21S2089E|NCRNA00285 C21orf91 overlapping transcript 1 ncRNA chr19-2257 chr19 52821048 52821258 + 11.7 0.000 intron (NM_001369767, intron 1 of 2) intron (NM_001369767, intron 1 of 2) 480 NR_163139 7576 Hs.732407 NM_006969 ENSG00000198538 ZNF28 KOX24 zinc finger protein 28 protein-coding chr16-2495 chr16 88901900 88902110 + 11.7 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 18490 NR_135194 101927793 Hs.690953 NR_135194 ENSG00000259881 LOC101927793 - uncharacterized LOC101927793 ncRNA chr10-4532 chr10 95945140 95945350 + 11.7 0.000 intron (NM_001349008, intron 9 of 34) intron (NM_001349008, intron 9 of 34) 37280 NM_001349008 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr12-2450 chr12 53129303 53129513 + 11.7 0.000 Intergenic Intergenic 25922 NM_003578 8435 Hs.656544 NM_003578 ENSG00000167780 SOAT2 ACACT2|ACAT2|ARGP2 sterol O-acyltransferase 2 protein-coding chr5-2339 chr5 68343491 68343701 + 11.7 0.000 Intergenic Intergenic 51019 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr5-1083 chr5 43058153 43058363 + 11.7 0.000 intron (NR_104651, intron 2 of 2) LTR5B|LTR|ERVK 8713 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA chr2-8056 chr2 72848540 72848750 + 11.7 0.000 Intergenic L2a|LINE|L2 -22612 NM_001321729 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr2-8392 chr2 113194476 113194686 + 11.7 0.000 intron (NM_012455, intron 10 of 16) Tigger3c|DNA|TcMar-Tigger 20610 NM_012455 23550 Hs.516306 NM_012455 ENSG00000125637 PSD4 EFA6B|TIC pleckstrin and Sec7 domain containing 4 protein-coding chr7-4320 chr7 36015789 36015999 + 11.7 0.000 Intergenic L1MC3|LINE|L1 -79416 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr2-5192 chr2 37562345 37562555 + 11.7 0.000 Intergenic MER44B|DNA|TcMar-Tigger 109749 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr2-2604 chr2 24708743 24708953 + 11.7 0.000 intron (NM_001362950, intron 13 of 23) L2b|LINE|L2 -84267 NM_024322 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr6-3898 chr6 64723918 64724128 + 11.7 0.000 intron (NM_001292009, intron 22 of 43) intron (NM_001292009, intron 22 of 43) -577395 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr12-1164 chr12 22443436 22443646 + 11.7 0.000 Intergenic MamGypLTR3|LTR|Gypsy 100656 NM_001286174 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding chr2-2261 chr2 241190197 241190407 + 11.7 0.000 intron (NM_001001666, intron 2 of 3) intron (NM_001001666, intron 2 of 3) 1625 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr6-4706 chr6 56741536 56741746 + 11.7 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) -98752 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr1-3643 chr1 63197117 63197327 + 11.7 0.000 intron (NR_038252, intron 5 of 11) MLT1D|LTR|ERVL-MaLR 120035 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr3-2448 chr3 49701996 49702206 + 11.7 0.000 non-coding (NR_135218, exon 18 of 39) non-coding (NR_135218, exon 18 of 39) 12544 NM_022064 63891 Hs.553723 NM_022064 ENSG00000164068 RNF123 FP1477|KPC1 ring finger protein 123 protein-coding chr1-3000 chr1 208207605 208207815 + 11.7 0.000 intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 36674 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr17-2953 chr17 61183718 61183928 + 11.7 0.000 intron (NM_001330413, intron 23 of 25) Tigger17b|DNA|TcMar-Tigger 183881 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr11-2878 chr11 35174752 35174962 + 11.7 0.000 intron (NM_001001389, intron 1 of 16) L2a|LINE|L2 11907 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr5-2387 chr5 95697454 95697664 + 11.7 0.000 intron (NM_001349303, intron 5 of 8) intron (NM_001349303, intron 5 of 8) -14549 NR_125328 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr10-8561 chr10 94914845 94915055 + 11.7 0.000 Intergenic L1P1|LINE|L1 -23708 NM_000771 1559 Hs.282624 NM_000771 ENSG00000138109 CYP2C9 CPC9|CYP2C|CYP2C10|CYPIIC9|P450IIC9 cytochrome P450 family 2 subfamily C member 9 protein-coding chr7-2996 chr7 32218182 32218392 + 11.7 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 81041 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr4-1410 chr4 3461848 3462058 + 11.7 0.000 Intergenic Intergenic -1353 NM_001164673 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr20-920 chr20 1894386 1894596 + 11.7 0.000 promoter-TSS (NM_080792) promoter-TSS (NM_080792) -251 NM_080792 140885 Hs.581021 NM_080792 ENSG00000198053 SIRPA BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP signal regulatory protein alpha protein-coding chr12-3651 chr12 107847316 107847526 + 11.7 0.000 Intergenic LTR56|LTR|ERV1 56350 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr15-1989 chr15 42089451 42089661 + 11.7 0.000 intron (NM_178034, intron 1 of 19) intron (NM_178034, intron 1 of 19) 5006 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr7-2023 chr7 66447114 66447324 + 11.7 0.000 Intergenic Intergenic -46413 NR_134573 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr2-10907 chr2 71236733 71236943 + 11.7 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -9735 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr1-3012 chr1 226186254 226186464 + 11.7 0.000 intron (NM_022735, intron 1 of 7) CpG 382 NM_022735 64746 Hs.520207 NM_022735 ENSG00000182827 ACBD3 GCP60|GOCAP1|GOLPH1|PAP7 acyl-CoA binding domain containing 3 protein-coding chr10-1901 chr10 119317491 119317701 + 11.7 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) -60376 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr1-4820 chr1 22380184 22380394 + 11.7 0.000 Intergenic MIR|SINE|MIR -71562 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr5-2594 chr5 102547721 102547931 + 11.7 0.000 Intergenic Intergenic -33542 NR_047462 100861468 Hs.519483 NR_047462 ENSG00000250958 LINC00492 - long intergenic non-protein coding RNA 492 ncRNA chr6-1974 chr6 153773768 153773978 + 11.7 0.000 Intergenic Intergenic -236623 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chrX-354 chrX 101418561 101418771 + 11.7 0.000 intron (NR_028407, intron 1 of 15) CpG 388 NR_028407 100131755 Hs.729062 NM_152583 ENSG00000196440 ARMCX4 CXorf35|GASP4 armadillo repeat containing X-linked 4 protein-coding chr6-2457 chr6 24832444 24832654 + 11.7 0.000 intron (NM_001286445, intron 15 of 21) intron (NM_001286445, intron 15 of 21) -33632 NM_001282492 101928603 Hs.635133 NM_001282492 ENSG00000260286 ARMH2 C6orf229 armadillo like helical domain containing 2 protein-coding chr2-3962 chr2 69185846 69186056 + 11.7 0.000 intron (NM_032208, intron 16 of 17) intron (NM_032208, intron 16 of 17) 82269 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr1-2856 chr1 164565514 164565724 + 11.7 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 5897 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chrX-1137 chrX 31948865 31949075 + 11.7 0.000 intron (NM_000109, intron 45 of 78) L1M4a2|LINE|L1 206499 NM_004013 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-10838 chr3 164928125 164928335 + 11.7 0.000 Intergenic L1PA13|LINE|L1 -96750 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr15-1082 chr15 45061432 45061642 + 11.7 0.000 intron (NM_003104, intron 4 of 8) intron (NM_003104, intron 4 of 8) 38342 NM_003104 6652 Hs.878 NM_003104 ENSG00000140263 SORD HEL-S-95n|RDH|SDH|SORD1|XDH sorbitol dehydrogenase protein-coding chr12-1572 chr12 120835236 120835446 + 11.7 0.000 intron (NM_139015, intron 1 of 10) intron (NM_139015, intron 1 of 10) 69017 NM_139015 121665 Hs.507087 NM_139015 ENSG00000157837 SPPL3 IMP2|MDHV1887|PRO4332|PSH1|PSL4 signal peptide peptidase like 3 protein-coding chr15-2526 chr15 41890680 41890890 + 11.7 0.000 intron (NM_016642, intron 3 of 67) intron (NM_016642, intron 3 of 67) -1992 NR_135681 105370792 Hs.627877 NR_135681 LOC105370792 - uncharacterized LOC105370792 ncRNA chr11-2213 chr11 63764398 63764608 + 11.7 0.000 exon (NM_001144936, exon 4 of 5) exon (NM_001144936, exon 4 of 5) 4272 NM_001144936 65998 Hs.191073 NM_001144936 ENSG00000188070 C11orf95 - chromosome 11 open reading frame 95 protein-coding chr21-678 chr21 14107978 14108188 + 11.7 0.000 TTS (NM_001302998) TTS (NM_001302998) 98866 NM_198996 149998 Hs.139907 NM_145317 ENSG00000188992 LIPI CT17|LPDL|PLA1C|PRED5|mPA-PLA1 beta lipase I protein-coding chr14-1481 chr14 30143772 30143982 + 11.7 0.000 Intergenic Intergenic -216030 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr3-1733 chr3 126752215 126752425 + 11.7 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 48080 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr1-9181 chr1 21212317 21212527 + 11.7 0.000 Intergenic ERVL-B4-int|LTR|ERVL -35525 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr2-6198 chr2 15730666 15730876 + 11.7 0.000 Intergenic Intergenic 39989 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr3-4342 chr3 180761200 180761410 + 11.7 0.000 intron (NR_109986, intron 4 of 13) MER1B|DNA|hAT-Charlie -81816 NM_181426 339829 Hs.712820 NM_181426 ENSG00000284862 CCDC39 CILD14|FAP59 coiled-coil domain containing 39 protein-coding chr12-3140 chr12 42564899 42565109 + 11.7 0.000 intron (NM_153026, intron 1 of 7) intron (NM_153026, intron 1 of 7) 24742 NM_153026 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr1-4985 chr1 59731130 59731340 + 11.7 0.000 intron (NM_001350790, intron 15 of 16) intron (NM_001350790, intron 15 of 16) 2061 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr14-970 chr14 69580381 69580591 + 11.7 0.000 Intergenic LTR41B|LTR|ERVL -5615 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr6-1547 chr6 87660498 87660708 + 11.7 0.000 intron (NM_181837, intron 16 of 19) intron (NM_181837, intron 16 of 19) 41630 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr3-2985 chr3 87228444 87228654 + 11.7 0.000 intron (NM_001244644, intron 1 of 4) intron (NM_001244644, intron 1 of 4) 1240 NM_014043 25978 Hs.476930 NM_014043 ENSG00000083937 CHMP2B ALS17|CHMP2.5|DMT1|VPS2-2|VPS2B charged multivesicular body protein 2B protein-coding chr18-864 chr18 34977587 34977797 + 11.7 0.000 promoter-TSS (NM_001143827) promoter-TSS (NM_001143827) -676 NM_001143827 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr2-5893 chr2 241181308 241181518 + 11.7 0.000 intron (NM_001282413, intron 8 of 8) intron (NM_001282413, intron 8 of 8) -7264 NM_001001666 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr3-2037 chr3 119294922 119295132 + 11.7 0.000 intron (NM_020754, intron 1 of 11) intron (NM_020754, intron 1 of 11) 644 NM_020754 57514 Hs.668218 NM_020754 ENSG00000031081 ARHGAP31 AOS1|CDGAP Rho GTPase activating protein 31 protein-coding chr13-3900 chr13 53801320 53801530 + 11.7 0.000 Intergenic Intergenic -13994 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr10-1623 chr10 74420106 74420316 + 11.7 0.000 intron (NM_001369124, intron 6 of 9) intron (NM_001369124, intron 6 of 9) 109113 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr2-6065 chr2 144524526 144524736 + 11.7 0.000 promoter-TSS (NR_136320) promoter-TSS (NR_136320) -187 NR_136320 105373656 Hs.734683 NR_136320 LOC105373656 - uncharacterized LOC105373656 ncRNA chr2-1605 chr2 160408034 160408244 + 11.7 0.000 promoter-TSS (NR_039946) promoter-TSS (NR_039946) -257 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr16-878 chr16 70114138 70114348 + 11.7 0.000 5' UTR (NM_017990, exon 1 of 19) 5' UTR (NM_017990, exon 1 of 19) 617 NM_001322119 55066 Hs.744043 NM_017990 ENSG00000090857 PDPR PDP3 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding chr14-5128 chr14 89996267 89996477 + 11.7 0.000 intron (NM_001008744, intron 13 of 15) intron (NM_001008744, intron 13 of 15) 40445 NM_001330205 55775 Hs.209945 NM_018319 ENSG00000042088 TDP1 - tyrosyl-DNA phosphodiesterase 1 protein-coding chrX-839 chrX 116778509 116778719 + 11.7 0.000 Intergenic L1PA13|LINE|L1 39246 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr3-3788 chr3 13543339 13543549 + 11.7 0.000 Intergenic Intergenic -5681 NM_001998 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr9-2397 chr9 133763867 133764077 + 11.7 0.000 3' UTR (NM_003371, exon 27 of 27) 3' UTR (NM_003371, exon 27 of 27) -24017 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr11-4076 chr11 22510105 22510315 + 11.7 0.000 Intergenic Intergenic -18191 NR_120583 102723378 Hs.374255 NR_120583 ENSG00000255323 LINC01495 - long intergenic non-protein coding RNA 1495 ncRNA chr22-816 chr22 46774116 46774326 + 11.7 0.000 5' UTR (NM_001284305, exon 1 of 13) 5' UTR (NM_001284305, exon 1 of 13) 294 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr17-2447 chr17 30928791 30929001 + 11.7 0.000 intron (NR_144488, intron 3 of 9) MER91A|DNA|hAT-Tip100 6951 NM_018404 55803 Hs.514063 NM_018404 ENSG00000184060 ADAP2 CENTA2|HSA272195|cent-b ArfGAP with dual PH domains 2 protein-coding chr7-4289 chr7 18053075 18053285 + 11.7 0.000 Intergenic Intergenic -25334 NM_175886 221823 Hs.169284 NM_175886 ENSG00000229937 PRPS1L1 PRPS1|PRPS3|PRPSL|PRS-III phosphoribosyl pyrophosphate synthetase 1 like 1 protein-coding chr1-5483 chr1 116376572 116376782 + 11.7 0.000 intron (NM_001160233, intron 1 of 22) intron (NM_001160233, intron 1 of 22) 2810 NM_001160233 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr1-2658 chr1 178543215 178543425 + 11.7 0.000 intron (NR_033186, intron 1 of 2) intron (NR_033186, intron 1 of 2) 524 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 (putative) ncRNA chr11-4577 chr11 128458594 128458804 + 11.7 0.000 TTS (NM_001162422) TTS (NM_001162422) 63611 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding GL000194.1-1 GL000194.1 114434 114644 + 11.7 0.000 NA NA NA NA chr8-733 chr8 141315365 141315575 + 11.7 0.000 Intergenic Intergenic -25079 NR_024441 731779 Hs.586414 NR_024441 ENSG00000253595 LINC01300 - long intergenic non-protein coding RNA 1300 ncRNA chr5-1238 chr5 169583612 169583822 + 11.7 0.000 promoter-TSS (NM_001329642) promoter-TSS (NM_001329642) -56 NM_001329639 54908 Hs.368710 NM_017785 ENSG00000040275 SPDL1 CCDC99 spindle apparatus coiled-coil protein 1 protein-coding chr7-1703 chr7 1078304 1078514 + 11.7 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) -8398 NM_001039966 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr11-5058 chr11 105730396 105730606 + 11.7 0.000 intron (NR_046356, intron 2 of 16) L1PA7|LINE|L1 119795 NR_046356 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr13-4151 chr13 85147738 85147948 + 11.7 0.000 intron (NR_126383, intron 1 of 5) intron (NR_126383, intron 1 of 5) 214 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr12-6908 chr12 23553445 23553655 + 11.7 0.000 intron (NM_001261414, intron 13 of 16) intron (NM_001261414, intron 13 of 16) 31036 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr11-3529 chr11 9489333 9489543 + 11.7 0.000 intron (NM_001282656, intron 7 of 15) intron (NM_001282656, intron 7 of 15) 28426 NM_003442 7702 Hs.523471 NM_003442 ENSG00000166478 ZNF143 SBF|STAF|pHZ-1 zinc finger protein 143 protein-coding chr15-1844 chr15 49877936 49878146 + 11.7 0.000 intron (NR_073597, intron 23 of 26) MIR3|SINE|MIR 235338 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr13-661 chr13 67147855 67148065 + 11.7 0.000 intron (NM_001318372, intron 2 of 4) intron (NM_001318372, intron 2 of 4) 82376 NM_001318372 5101 Hs.654709 NM_020403 ENSG00000184226 PCDH9 - protocadherin 9 protein-coding chr6-6170 chr6 5054502 5054712 + 11.7 0.000 intron (NR_126015, intron 2 of 3) MER4D0|LTR|ERV1 24635 NR_126018 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chrX-4483 chrX 63799105 63799315 + 11.7 0.000 Intergenic L1PA7|LINE|L1 -13123 NR_031567 100302115 NR_031567 ENSG00000222532 MIR1468 MIRN1468|hsa-mir-1468|mir-1468 microRNA 1468 ncRNA chrX-3665 chrX 103093518 103093728 + 11.7 0.000 promoter-TSS (NM_022052) promoter-TSS (NM_022052) -480 NM_022052 56000 Hs.60386 NM_022052 ENSG00000147206 NXF3 - nuclear RNA export factor 3 protein-coding chr6-2354 chr6 132300515 132300725 + 11.7 0.000 intron (NM_015529, intron 10 of 11) intron (NM_015529, intron 10 of 11) 100855 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr8-2829 chr8 129032882 129033092 + 11.7 0.000 Intergenic Intergenic -66986 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA chr10-3508 chr10 70836149 70836359 + 11.7 0.000 intron (NM_003901, intron 2 of 14) intron (NM_003901, intron 2 of 14) 20306 NM_003901 8879 Hs.499984 NM_003901 ENSG00000166224 SGPL1 NPHS14|S1PL|SPL sphingosine-1-phosphate lyase 1 protein-coding chr16-1558 chr16 84062849 84063059 + 11.7 0.000 intron (NM_003791, intron 19 of 22) intron (NM_003791, intron 19 of 22) -20797 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr17-8202 chr17 63502842 63503052 + 11.7 0.000 Intergenic L1MB2|LINE|L1 18101 NM_001178057 1636 Hs.298469 NM_000789 ENSG00000159640 ACE ACE1|CD143|DCP|DCP1 angiotensin I converting enzyme protein-coding chr12-6922 chr12 24879652 24879862 + 11.7 0.000 intron (NM_001178091, intron 3 of 9) MIRc|SINE|MIR 22465 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr8-1808 chr8 116229909 116230119 + 11.7 0.000 intron (NR_046215, intron 4 of 13) intron (NR_046215, intron 4 of 13) 95045 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr11-2785 chr11 74673150 74673360 + 11.7 0.000 Intergenic Intergenic 38112 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr17-4151 chr17 82654839 82655049 + 11.7 0.000 TTS (NM_006822) TTS (NM_006822) -6500 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr3-2612 chr3 174498614 174498824 + 11.7 0.000 Intergenic L1ME1|LINE|L1 -360615 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr8-2350 chr8 24299751 24299961 + 11.7 0.000 intron (NR_125808, intron 4 of 5) intron (NR_125808, intron 4 of 5) 5787 NM_014265 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr20-1030 chr20 32997896 32998106 + 11.7 0.000 intron (NM_080675, intron 5 of 12) intron (NM_080675, intron 5 of 12) 6432 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr19-2473 chr19 2923613 2923823 + 11.7 0.000 Intergenic MER68|LTR|ERVL 16610 NM_001319083 126295 Hs.591378 NM_173480 ENSG00000171970 ZNF57 ZNF424 zinc finger protein 57 protein-coding chr9-3588 chr9 77717946 77718156 + 11.7 0.000 3' UTR (NM_002072, exon 7 of 7) 3' UTR (NM_002072, exon 7 of 7) -69729 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr17-2428 chr17 82892038 82892248 + 11.7 0.000 intron (NM_005993, intron 16 of 38) intron (NM_005993, intron 16 of 38) -52121 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chrX-1152 chrX 41596691 41596901 + 11.7 0.000 intron (NM_003688, intron 12 of 26) intron (NM_003688, intron 12 of 26) -92177 NM_005300 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr1-7862 chr1 97919662 97919872 + 11.7 0.000 intron (NM_000110, intron 1 of 22) intron (NM_000110, intron 1 of 22) 1292 NM_001160301 1806 Hs.335034 NM_000110 ENSG00000188641 DPYD DHP|DHPDHASE|DPD dihydropyrimidine dehydrogenase protein-coding chr16-2354 chr16 53695066 53695276 + 11.7 0.000 TTS (NM_001328423) TTS (NM_001328423) 8688 NM_001328422 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding chr8-2100 chr8 136525081 136525291 + 11.7 0.000 Intergenic Intergenic -5612 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr4-1675 chr4 144734622 144734832 + 11.7 0.000 intron (NM_022475, intron 11 of 12) intron (NM_022475, intron 11 of 12) 88571 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr10-4148 chr10 82866501 82866711 + 11.7 0.000 intron (NR_163253, intron 6 of 10) L2|LINE|L2 -633686 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr3-4025 chr3 66480618 66480828 + 11.7 0.000 intron (NM_015541, intron 1 of 18) intron (NM_015541, intron 1 of 18) 19698 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr5-4511 chr5 13400800 13401010 + 11.7 0.000 Intergenic Intergenic -368019 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr14-2303 chr14 72025142 72025352 + 11.7 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 91720 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr8-1764 chr8 51405853 51406063 + 11.7 0.000 intron (NM_144651, intron 17 of 22) intron (NM_144651, intron 17 of 22) 403487 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr2-4857 chr2 96584079 96584289 + 11.7 0.000 Intergenic FRAM|SINE|Alu 46305 NM_001319092 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr13-1475 chr13 98328054 98328264 + 11.7 0.000 intron (NM_005766, intron 2 of 26) MER72|LTR|ERV1 119635 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr7-3349 chr7 92683081 92683291 + 11.7 0.000 intron (NM_001259, intron 4 of 7) intron (NM_001259, intron 4 of 7) -92796 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr4-2163 chr4 92235744 92235954 + 11.7 0.000 Intergenic Intergenic 41453 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr6-7780 chr6 97189885 97190095 + 11.7 0.000 intron (NM_001350600, intron 13 of 23) intron (NM_001350600, intron 13 of 23) 93226 NM_001350599 253714 Hs.444292 NM_198468 ENSG00000146263 MMS22L C6orf167|dJ39B17.2 MMS22 like, DNA repair protein protein-coding chr1-2649 chr1 163321581 163321791 + 11.7 0.000 promoter-TSS (NM_031423) promoter-TSS (NM_031423) 105 NM_001254748 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr14-2009 chr14 57182817 57183027 + 11.7 0.000 Intergenic MIR|SINE|MIR 85983 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding chr17-4793 chr17 48933038 48933248 + 11.7 0.000 intron (NR_133679, intron 6 of 7) intron (NR_133679, intron 6 of 7) 11699 NM_001317192 11267 Hs.127249 NM_007241 ENSG00000159210 SNF8 Dot3|EAP30|VPS22 SNF8 subunit of ESCRT-II protein-coding chr1-3597 chr1 21342758 21342968 + 11.7 0.000 intron (NM_001113348, intron 1 of 18) intron (NM_001113348, intron 1 of 18) 2641 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr10-3435 chr10 43215640 43215850 + 11.7 0.000 intron (NM_145313, intron 1 of 12) L2c|LINE|L2 13994 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr16-1868 chr16 81004842 81005052 + 11.7 0.000 intron (NM_001351967, intron 1 of 4) intron (NM_001351967, intron 1 of 4) -1551 NM_018455 55839 Hs.726537 NM_018455 ENSG00000166451 CENPN BM039|C16orf60|CENP-N|ICEN32 centromere protein N protein-coding chr14-1457 chr14 103205959 103206169 + 11.7 0.000 Intergenic Intergenic -17036 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr2-2663 chr2 218892867 218893077 + 11.7 0.000 exon (NM_025216, exon 4 of 4) exon (NM_025216, exon 4 of 4) 12120 NM_025216 80326 Hs.121540 NM_025216 ENSG00000135925 WNT10A OODD|SSPS|STHAG4 Wnt family member 10A protein-coding chr2-3024 chr2 63737307 63737517 + 11.7 0.000 Intergenic Intergenic -103552 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr7-3722 chr7 66399590 66399800 + 11.7 0.000 non-coding (NR_026873, exon 2 of 5) non-coding (NR_026873, exon 2 of 5) 713 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr1-8576 chr1 173532464 173532674 + 11.7 0.000 intron (NM_178527, intron 17 of 27) intron (NM_178527, intron 17 of 27) 55234 NM_004905 9588 Hs.120 NM_004905 ENSG00000117592 PRDX6 1-Cys|AOP2|HEL-S-128m|NSGPx|PRX|aiPLA2|p29 peroxiredoxin 6 protein-coding chr9-2386 chr9 127629771 127629981 + 11.7 0.000 intron (NM_001032221, intron 1 of 18) intron (NM_001032221, intron 1 of 18) 17599 NM_001032221 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr3-6043 chr3 50121058 50121268 + 11.7 0.000 intron (NR_135301, intron 3 of 3) intron (NR_135301, intron 3 of 3) -20175 NR_045388 100775107 Hs.439480 NR_045388 ENSG00000281691 RBM5-AS1 LUST RBM5 antisense RNA 1 ncRNA chr22-2037 chr22 41620197 41620407 + 11.7 0.000 promoter-TSS (NM_001469) promoter-TSS (NM_001469) 741 NM_015704 27351 Hs.570455 NM_015704 ENSG00000100418 DESI1 D15Wsu75e|DESI2|DJ347H13.4|DeSI-1|FAM152B|POST|PPPDE2 desumoylating isopeptidase 1 protein-coding chr10-5179 chr10 59344976 59345186 + 11.7 0.000 intron (NM_001347848, intron 4 of 15) intron (NM_001347848, intron 4 of 15) 17468 NM_198215 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr12-3099 chr12 20267796 20268006 + 11.7 0.000 Intergenic Intergenic -101344 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr7-2684 chr7 18770184 18770394 + 11.7 0.000 intron (NM_058176, intron 15 of 22) intron (NM_058176, intron 15 of 22) 261019 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr8-5894 chr8 16764325 16764535 + 11.7 0.000 Intergenic Intergenic 237915 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr18-941 chr18 3367866 3368076 + 11.7 0.000 Intergenic Intergenic -17412 NR_146506 105371964 Hs.105326 NR_146506 ENSG00000259256 LINC01895 - long intergenic non-protein coding RNA 1895 ncRNA chr17-2323 chr17 49495247 49495457 + 11.7 0.000 promoter-TSS (NM_002507) promoter-TSS (NM_002507) 59 NM_002507 4804 Hs.415768 NM_002507 ENSG00000064300 NGFR CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR nerve growth factor receptor protein-coding chr17-1358 chr17 61399663 61399873 + 11.7 0.000 promoter-TSS (NR_125749) promoter-TSS (NR_125749) -75 NM_005994 6909 Hs.531085 NM_005994 ENSG00000121068 TBX2 VETD T-box transcription factor 2 protein-coding chr8-1135 chr8 130483314 130483524 + 11.7 0.000 Intergenic Intergenic -39745 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr6-1826 chr6 150377428 150377638 + 11.7 0.000 intron (NM_001318495, intron 1 of 4) intron (NM_001318495, intron 1 of 4) 8521 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr12-4979 chr12 77415302 77415512 + 11.7 0.000 Intergenic Intergenic -349838 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr18-402 chr18 22822076 22822286 + 11.7 0.000 Intergenic L2c|LINE|L2 -35344 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr3-2846 chr3 30203031 30203241 + 11.7 0.000 Intergenic MSTC|LTR|ERVL-MaLR -268980 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr2-4390 chr2 55585520 55585730 + 11.7 0.000 intron (NM_020463, intron 6 of 14) intron (NM_020463, intron 6 of 14) 31997 NM_001282850 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding chr9-1541 chr9 133726409 133726619 + 11.7 0.000 intron (NM_001134707, intron 6 of 20) intron (NM_001134707, intron 6 of 20) 11838 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-3396 chr1 211470065 211470275 + 11.7 0.000 Intergenic Intergenic 22747 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr7-2666 chr7 6175694 6175904 + 11.7 0.000 intron (NM_001367581, intron 5 of 13) AluSx1|SINE|Alu -3662 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr9-2793 chr9 116985575 116985785 + 11.7 0.000 intron (NM_014010, intron 6 of 21) intron (NM_014010, intron 6 of 21) 195521 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr21-951 chr21 43283072 43283282 + 11.7 0.000 Intergenic Intergenic 48862 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr8-1503 chr8 58529889 58530099 + 11.7 0.000 Intergenic HERVL32-int|LTR|ERVL -22930 NM_001348340 6386 Hs.200804 NM_005625 ENSG00000137575 SDCBP MDA-9|MDA9|ST1|SYCL|TACIP18 syndecan binding protein protein-coding chr19-1057 chr19 7909717 7909927 + 11.7 0.000 exon (NM_001297556, exon 2 of 11) exon (NM_001297556, exon 2 of 11) 5945 NM_001297556 5609 Hs.531754 NM_145185 ENSG00000076984 MAP2K7 JNKK2|MAPKK7|MEK|MEK 7|MKK7|PRKMK7|SAPKK-4|SAPKK4 mitogen-activated protein kinase kinase 7 protein-coding chr1-4013 chr1 172933886 172934096 + 11.7 0.000 Intergenic Intergenic 116972 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr22-2989 chr22 50577429 50577639 + 11.7 0.000 intron (NR_027928, intron 12 of 29) intron (NR_027928, intron 12 of 29) 483 NM_001145137 1375 Hs.439777 NM_004377 ENSG00000205560 CPT1B CPT1-M|CPT1M|CPTI|CPTI-M|M-CPT1|MCCPT1|MCPT1 carnitine palmitoyltransferase 1B protein-coding chr11-2250 chr11 92460771 92460981 + 11.7 0.000 intron (NM_001008781, intron 1 of 24) intron (NM_001008781, intron 1 of 24) 108780 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr13-608 chr13 109412530 109412740 + 11.7 0.000 Intergenic Intergenic 11939 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr1-7337 chr1 7739224 7739434 + 11.7 0.000 intron (NM_001349624, intron 6 of 11) intron (NM_001349624, intron 6 of 11) -31967 NM_004781 9341 Hs.66708 NM_004781 ENSG00000049245 VAMP3 CEB vesicle associated membrane protein 3 protein-coding chr1-14877 chr1 81154252 81154462 + 11.7 0.000 Intergenic Intergenic -151835 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr17-996 chr17 67390986 67391196 + 11.7 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) 13810 NM_181671 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein cytoplasmic 1 protein-coding chrX-149 chrX 154478770 154478980 + 11.7 0.000 exon (NM_006014, exon 1 of 3) exon (NM_006014, exon 1 of 3) 382 NM_006014 8270 Hs.444619 NM_006014 ENSG00000196976 LAGE3 CVG5|DXS9879E|DXS9951E|ESO3|GAMOS2|ITBA2|Pcc1 L antigen family member 3 protein-coding chr18-532 chr18 76425239 76425449 + 11.7 0.000 intron (NM_014643, intron 3 of 6) intron (NM_014643, intron 3 of 6) -66308 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr7-2167 chr7 66636054 66636264 + 11.7 0.000 intron (NM_001167961, intron 2 of 4) intron (NM_001167961, intron 2 of 4) 7278 NM_153033 154881 Hs.546627 NM_153033 ENSG00000243335 KCTD7 CLN14|EPM3 potassium channel tetramerization domain containing 7 protein-coding chr9-5420 chr9 96149513 96149723 + 11.7 0.000 Intergenic Intergenic -33207 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr5-2578 chr5 60253802 60254012 + 11.7 0.000 intron (NM_001364599, intron 1 of 16) intron (NM_001364599, intron 1 of 16) 118756 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr16-3948 chr16 86209586 86209796 + 11.7 0.000 Intergenic Intergenic 13510 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr9-1574 chr9 71767232 71767442 + 11.7 0.000 intron (NM_013390, intron 1 of 23) intron (NM_013390, intron 1 of 23) 1176 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr8-883 chr8 29314870 29315080 + 11.7 0.000 Intergenic Intergenic 33830 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr8-1943 chr8 51803394 51803604 + 11.7 0.000 intron (NM_144651, intron 1 of 22) intron (NM_144651, intron 1 of 22) 5946 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr1-7129 chr1 203202677 203202887 + 11.7 0.000 Intergenic Intergenic -16078 NM_001276 1116 Hs.382202 NM_001276 ENSG00000133048 CHI3L1 ASRT7|CGP-39|GP-39|GP39|HC-gp39|HCGP-3P|YK-40|YKL-40|YKL40|YYL-40|hCGP-39 chitinase 3 like 1 protein-coding chr8-3050 chr8 144436778 144436988 + 11.7 0.000 exon (NM_013432, exon 15 of 26) exon (NM_013432, exon 15 of 26) -1264 NR_106953 102466271 NR_106953 ENSG00000276598 MIR6893 hsa-mir-6893 microRNA 6893 ncRNA chr13-1368 chr13 94170349 94170559 + 11.7 0.000 intron (NR_046535, intron 3 of 3) intron (NR_046535, intron 3 of 3) 17537 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr16-2466 chr16 86598605 86598815 + 11.7 0.000 Intergenic Intergenic 20201 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr5-2524 chr5 159899817 159900027 + 11.7 0.000 Intergenic L1M5|LINE|L1 -16560 NM_000679 147 Hs.368632 NM_000679 ENSG00000170214 ADRA1B ADRA1|ALPHA1BAR adrenoceptor alpha 1B protein-coding chr10-1256 chr10 103852272 103852482 + 11.7 0.000 intron (NM_014631, intron 1 of 13) intron (NM_014631, intron 1 of 13) 3029 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr7-1082 chr7 101882071 101882281 + 11.7 0.000 intron (NM_181552, intron 1 of 23) AluJb|SINE|Alu 64550 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr16-2737 chr16 378909 379119 + 11.7 0.000 intron (NM_021259, intron 1 of 12) intron (NM_021259, intron 1 of 12) 2964 NM_021259 58986 Hs.288940 NM_021259 ENSG00000129925 TMEM8A GPI-PLA2|M83|PGAP6|TMEM6|TMEM8 transmembrane protein 8A protein-coding chr18-1868 chr18 25863228 25863438 + 11.7 0.000 Intergenic Intergenic 227280 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr14-2510 chr14 104097163 104097373 + 11.7 0.000 intron (NM_001080464, intron 4 of 15) intron (NM_001080464, intron 4 of 15) 11568 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr2-8111 chr2 78281071 78281281 + 11.7 0.000 intron (NR_110288, intron 1 of 3) THE1B|LTR|ERVL-MaLR 9555 NR_110288 101927967 Hs.406952 NR_110288 LOC101927967 - uncharacterized LOC101927967 ncRNA chrX-1553 chrX 46770725 46770935 + 11.7 0.000 Intergenic Intergenic -11712 NM_032591 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr5-9183 chr5 178871031 178871241 + 11.7 0.000 intron (NM_058230, intron 4 of 4) L2a|LINE|L2 11183 NM_058230 117608 Hs.724051 NM_058230 ENSG00000178338 ZNF354B KID2 zinc finger protein 354B protein-coding chr2-3282 chr2 37624624 37624834 + 11.7 0.000 Intergenic Intergenic 47470 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr11-7513 chr11 7290822 7291032 + 11.7 0.000 intron (NM_175733, intron 1 of 6) LTR33|LTR|ERVL 39023 NM_175733 143425 Hs.177193 NM_175733 ENSG00000170743 SYT9 - synaptotagmin 9 protein-coding chr9-2882 chr9 131067310 131067520 + 11.7 0.000 intron (NM_006059, intron 14 of 27) MIR3|SINE|MIR -29061 NR_033701 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr19-1940 chr19 17855585 17855795 + 11.7 0.000 Intergenic Intergenic -4220 NM_000980 6142 Hs.337766 NM_000980 ENSG00000105640 RPL18A L18A ribosomal protein L18a protein-coding chr3-1903 chr3 155323156 155323366 + 11.7 0.000 Intergenic Intergenic -29578 NM_001352129 100507537 Hs.518341 NM_001352129 ENSG00000240045 STRIT1 DWORF small transmembrane regulator of ion transport 1 protein-coding chr1-8415 chr1 87684933 87685143 + 11.7 0.000 Intergenic Intergenic -313383 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr2-5091 chr2 11618727 11618937 + 11.7 0.000 exon (NM_014668, exon 22 of 33) exon (NM_014668, exon 22 of 33) 51363 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr1-9536 chr1 39587973 39588183 + 11.7 0.000 Intergenic AluSz|SINE|Alu -11288 NM_003819 8761 Hs.169900 NM_003819 ENSG00000090621 PABPC4 APP-1|APP1|PABP4|iPABP poly(A) binding protein cytoplasmic 4 protein-coding chr2-7748 chr2 38233308 38233518 + 11.7 0.000 Intergenic Intergenic 102308 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr18-968 chr18 58314258 58314468 + 11.7 0.000 intron (NM_001144965, intron 5 of 30) AluSz|SINE|Alu 92792 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr17-2386 chr17 77785862 77786072 + 11.7 0.000 Intergenic Intergenic -57408 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr1-5141 chr1 156262936 156263146 + 11.7 0.000 intron (NM_015327, intron 13 of 21) intron (NM_015327, intron 13 of 21) -14924 NM_024897 79957 Hs.235873 NM_024897 ENSG00000160781 PAQR6 PRdelta progestin and adipoQ receptor family member 6 protein-coding chr16-2382 chr16 66919885 66920095 + 11.7 0.000 Intergenic Intergenic -1105 NM_001204746 1014 Hs.513660 NM_004062 ENSG00000166589 CDH16 - cadherin 16 protein-coding chr21-474 chr21 44006894 44007104 + 11.7 0.000 Intergenic Intergenic -5310 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr18-573 chr18 74269460 74269670 + 11.7 0.000 intron (NM_001190807, intron 1 of 3) L2a|LINE|L2 22398 NM_001190807 1528 Hs.465413 NM_001914 ENSG00000166347 CYB5A CYB5|MCB5|METAG cytochrome b5 type A protein-coding chr17-1614 chr17 78359423 78359633 + 11.7 0.000 promoter-TSS (NR_110845) promoter-TSS (NR_110845) 551 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr1-6899 chr1 145847889 145848099 + 11.7 0.000 TTS (NM_006099) TTS (NM_006099) 2364 NM_001012758 200035 Hs.585066 NM_001012758 ENSG00000186364 NUDT17 - nudix hydrolase 17 protein-coding chr1-4858 chr1 29517909 29518119 + 11.7 0.000 Intergenic MER113A|DNA|hAT-Charlie -167900 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr18-631 chr18 13139618 13139828 + 11.7 0.000 Intergenic Intergenic -79037 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr18-545 chr18 23994468 23994678 + 11.5 0.000 intron (NR_110796, intron 5 of 5) intron (NR_110796, intron 5 of 5) 1686 NM_153211 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr10-2868 chr10 86413113 86413323 + 11.5 0.000 Intergenic Intergenic -46423 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr5-2473 chr5 139593890 139594100 + 11.5 0.000 intron (NM_181838, intron 2 of 7) intron (NM_181838, intron 2 of 7) 32656 NM_003339 7322 Hs.108332 NM_003339 ENSG00000131508 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin conjugating enzyme E2 D2 protein-coding chr6-8563 chr6 163463894 163464104 + 11.5 0.000 intron (NM_206853, intron 2 of 6) intron (NM_206853, intron 2 of 6) 49281 NM_006775 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr2-6464 chr2 162413043 162413253 + 11.5 0.000 intron (NM_033272, intron 9 of 15) AluSq2|SINE|Alu 68780 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr10-2159 chr10 103079507 103079717 + 11.5 0.000 3' UTR (NM_017649, exon 8 of 8) 3' UTR (NM_017649, exon 8 of 8) 74209 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr9-2090 chr9 78773718 78773928 + 11.5 0.000 Intergenic Tigger9a|DNA|TcMar-Tigger 371843 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr12-3220 chr12 56323774 56323984 + 11.5 0.000 exon (NM_001127460, exon 14 of 26) exon (NM_001127460, exon 14 of 26) -7531 NM_001190991 10330 Hs.8752 NM_014255 ENSG00000257727 CNPY2 HP10390|MSAP|TMEM4|ZSIG9 canopy FGF signaling regulator 2 protein-coding chr4-1582 chr4 7917849 7918059 + 11.5 0.000 intron (NM_001371091, intron 1 of 17) MIR3|SINE|MIR -21047 NM_203423 389199 Hs.375210 NM_203423 LOC389199 - uncharacterized LOC389199 protein-coding chr17-4301 chr17 78421587 78421797 + 11.5 0.000 intron (NR_110602, intron 8 of 8) intron (NR_110602, intron 8 of 8) 43043 NR_110601 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr3-5055 chr3 40109931 40110141 + 11.5 0.000 intron (NM_001284426, intron 1 of 14) intron (NM_001284426, intron 1 of 14) 10025 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr22-1869 chr22 40635608 40635818 + 11.5 0.000 intron (NM_020831, intron 1 of 14) MIR|SINE|MIR 1006 NM_020831 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr8-2470 chr8 131896594 131896804 + 11.5 0.000 Intergenic Intergenic -7394 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr12-2701 chr12 110741735 110741945 + 11.5 0.000 intron (NM_002710, intron 1 of 6) MIR|SINE|MIR 1051 NM_002710 5501 Hs.79081 NM_002710 ENSG00000186298 PPP1CC PP-1G|PP1C|PPP1G protein phosphatase 1 catalytic subunit gamma protein-coding chr14-1583 chr14 88879100 88879310 + 11.5 0.000 non-coding (NR_159362, exon 15 of 15) non-coding (NR_159362, exon 15 of 15) 54554 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr1-7737 chr1 31438728 31438938 + 11.5 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 25020 NM_018565 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr7-6045 chr7 111082274 111082484 + 11.5 0.000 intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) -8627 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr6-1183 chr6 138294114 138294324 + 11.5 0.000 intron (NM_020340, intron 20 of 33) intron (NM_020340, intron 20 of 33) -75729 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr1-14012 chr1 26339013 26339223 + 11.5 0.000 intron (NM_001039775, intron 6 of 19) L2b|LINE|L2 15012 NM_001039775 55057 Hs.128738 NM_017977 ENSG00000176092 CRYBG2 AIM1L crystallin beta-gamma domain containing 2 protein-coding chr5-1728 chr5 148965780 148965990 + 11.5 0.000 Intergenic MER102b|DNA|hAT-Charlie 96524 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr2-5677 chr2 202152579 202152789 + 11.5 0.000 intron (NM_001277372, intron 13 of 23) intron (NM_001277372, intron 13 of 23) -35626 NR_135244 729224 Hs.623895 NR_135243 KIAA2012-AS1 - KIAA2012 antisense RNA 1 ncRNA chr9-7102 chr9 129581646 129581856 + 11.5 0.000 Intergenic Intergenic -27133 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr3-10501 chr3 136395168 136395378 + 11.5 0.000 intron (NM_005862, intron 22 of 33) intron (NM_005862, intron 22 of 33) 144933 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr3-3455 chr3 156382549 156382759 + 11.5 0.000 intron (NM_172159, intron 1 of 13) MLT1I|LTR|ERVL-MaLR 64282 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr4-1728 chr4 1756180 1756390 + 11.5 0.000 Intergenic Intergenic 34764 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chr10-9178 chr10 130706024 130706234 + 11.5 0.000 Intergenic MSTC-int|LTR|ERVL-MaLR 256539 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr2-8142 chr2 82430035 82430245 + 11.5 0.000 Intergenic Intergenic -426663 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr4-2954 chr4 106312585 106312795 + 11.5 0.000 intron (NM_001163436, intron 1 of 25) L1ME2|LINE|L1 -2920 NM_001142415 9255 Hs.591680 NM_004757 ENSG00000164022 AIMP1 EMAP2|EMAPII|HLD3|SCYE1|p43 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 protein-coding chr9-4703 chr9 126406215 126406425 + 11.5 0.000 intron (NM_033446, intron 6 of 9) intron (NM_033446, intron 6 of 9) 4184 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr3-6794 chr3 144169871 144170081 + 11.5 0.000 Intergenic HAL1|LINE|L1 196895 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr9-5296 chr9 85018456 85018666 + 11.5 0.000 intron (NM_001018064, intron 16 of 17) intron (NM_001018064, intron 16 of 17) 312660 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr15-3277 chr15 77248071 77248281 + 11.5 0.000 intron (NM_024776, intron 4 of 7) AluJr|SINE|Alu -22772 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr2-6753 chr2 39189883 39190093 + 11.5 0.000 intron (NM_001009565, intron 5 of 7) intron (NM_001009565, intron 5 of 7) 39600 NM_001346911 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr18-1124 chr18 711682 711892 + 11.5 0.000 intron (NM_001318760, intron 1 of 13) intron (NM_001318760, intron 1 of 13) 843 NM_001318760 55556 Hs.658550 NM_017512 ENSG00000132199 ENOSF1 FUCD|RTS|TYMSAS enolase superfamily member 1 protein-coding chr14-5049 chr14 81400795 81401005 + 11.5 0.000 intron (NM_001366850, intron 2 of 7) MIRb|SINE|MIR 26875 NM_001256430 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr7-4739 chr7 65494458 65494668 + 11.5 0.000 non-coding (NR_157838, exon 6 of 6) non-coding (NR_157838, exon 6 of 6) 60502 NR_157838 101929322 NR_157837 LOC101929322 - integrator complex subunit 4 pseudogene pseudo chr5-1552 chr5 64166016 64166226 + 11.5 0.000 intron (NM_001113561, intron 1 of 7) CpG 278 NM_001113561 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr5-5688 chr5 161704876 161705086 + 11.5 0.000 Intergenic THE1B|LTR|ERVL-MaLR 19260 NM_000811 2559 Hs.90791 NM_000811 ENSG00000145863 GABRA6 - gamma-aminobutyric acid type A receptor alpha6 subunit protein-coding chr1-9199 chr1 22136896 22137106 + 11.5 0.000 intron (NM_030761, intron 1 of 4) intron (NM_030761, intron 1 of 4) 6096 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr5-1836 chr5 103918835 103919045 + 11.5 0.000 Intergenic Intergenic -356151 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr5-4022 chr5 34179821 34180031 + 11.5 0.000 intron (NR_146599, intron 3 of 11) intron (NR_146599, intron 3 of 11) -9655 NR_157803 646652 Hs.546584 NR_157803 LOC646652 - integral membrane glycoprotein-like pseudogene pseudo chr19-1541 chr19 33268193 33268403 + 11.5 0.000 Intergenic Intergenic 34236 NM_001287424 1050 Hs.76171 NM_004364 ENSG00000245848 CEBPA C/EBP-alpha|CEBP CCAAT enhancer binding protein alpha protein-coding chr2-3603 chr2 84908194 84908404 + 11.5 0.000 Intergenic Intergenic 2643 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr5-2226 chr5 633623 633833 + 11.5 0.000 intron (NM_018140, intron 4 of 11) intron (NM_018140, intron 4 of 11) 21388 NM_018140 55722 Hs.591741 NM_018140 ENSG00000112877 CEP72 - centrosomal protein 72 protein-coding chr3-5630 chr3 10561115 10561325 + 11.5 0.000 intron (NM_001353564, intron 1 of 20) L2b|LINE|L2 -55634 NM_001683 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr20-622 chr20 31662240 31662450 + 11.5 0.000 Intergenic Intergenic 24433 NM_032609 84701 Hs.277101 NM_032609 ENSG00000131055 COX4I2 COX4|COX4-2|COX4B|COX4L2|COXIV-2|dJ857M17.2 cytochrome c oxidase subunit 4I2 protein-coding chr10-1691 chr10 6219001 6219211 + 11.5 0.000 intron (NM_001314063, intron 6 of 15) intron (NM_001314063, intron 6 of 15) 16174 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr3-4273 chr3 152176485 152176695 + 11.5 0.000 intron (NR_136178, intron 1 of 2) intron (NR_136178, intron 1 of 2) 28839 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr10-5329 chr10 71334241 71334451 + 11.5 0.000 intron (NR_033414, intron 2 of 3) MER58A|DNA|hAT-Charlie 15087 NM_018344 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr6-3211 chr6 135488100 135488310 + 11.5 0.000 intron (NM_017651, intron 4 of 27) intron (NM_017651, intron 4 of 27) 9535 NM_001134831 54806 Hs.386684 NM_017651 ENSG00000135541 AHI1 AHI-1|JBTS3|ORF1|dJ71N10.1 Abelson helper integration site 1 protein-coding chr2-8607 chr2 141053000 141053210 + 11.5 0.000 intron (NM_018557, intron 10 of 90) intron (NM_018557, intron 10 of 90) -466420 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr3-1597 chr3 183537283 183537493 + 11.5 0.000 intron (NM_130446, intron 1 of 6) intron (NM_130446, intron 1 of 6) -11347 NR_046687 100874019 NR_046687 ENSG00000242522 KLHL6-AS1 - KLHL6 antisense RNA 1 ncRNA chr16-3916 chr16 83933464 83933674 + 11.5 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -19671 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr7-5472 chr7 41499720 41499930 + 11.5 0.000 Intergenic Intergenic -194094 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chrX-487 chrX 153900732 153900942 + 11.5 0.000 Intergenic L1ME1|LINE|L1 -1788 NR_027419 554 Hs.567240 NM_000054 ENSG00000126895 AVPR2 ADHR|DI1|DIR|DIR3|NDI|V2R arginine vasopressin receptor 2 protein-coding chr9-5568 chr9 111902566 111902776 + 11.5 0.000 intron (NM_003358, intron 1 of 8) intron (NM_003358, intron 1 of 8) 5857 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr10-2826 chr10 22316399 22316609 + 11.5 0.000 exon (NM_012071, exon 1 of 8) exon (NM_012071, exon 1 of 8) 116 NM_012071 23412 Hs.534398 NM_012071 ENSG00000148444 COMMD3 BUP|C10orf8 COMM domain containing 3 protein-coding chr11-6044 chr11 29350641 29350851 + 11.5 0.000 Intergenic LTR88a|LTR|Gypsy? -243667 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr7-1898 chr7 436416 436626 + 11.5 0.000 Intergenic Intergenic 57096 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr12-2352 chr12 8609109 8609319 + 11.5 0.000 intron (NM_001330343, intron 1 of 4) intron (NM_001330343, intron 1 of 4) 3645 NM_020661 57379 Hs.149342 NM_020661 ENSG00000111732 AICDA AID|ARP2|CDA2|HEL-S-284|HIGM2 activation induced cytidine deaminase protein-coding chr10-5835 chr10 112471899 112472109 + 11.5 0.000 intron (NM_001365712, intron 3 of 8) intron (NM_001365712, intron 3 of 8) -24401 NM_001351082 64429 Hs.196990 NM_022494 ENSG00000023041 ZDHHC6 DHHC-6|ZNF376 zinc finger DHHC-type containing 6 protein-coding chr5-6145 chr5 37619299 37619509 + 11.5 0.000 intron (NM_001345998, intron 10 of 17) intron (NM_001345998, intron 10 of 17) 215418 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr22-2129 chr22 37415970 37416180 + 11.5 0.000 intron (NM_052906, intron 2 of 2) MIRb|SINE|MIR 11395 NR_110512 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr16-4293 chr16 27668135 27668345 + 11.5 0.000 intron (NM_015202, intron 6 of 27) THE1B|LTR|ERVL-MaLR 50789 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr1-3135 chr1 58584463 58584673 + 11.5 0.000 Intergenic Intergenic -7316 NM_002353 4070 Hs.23582 NM_002353 ENSG00000184292 TACSTD2 EGP-1|EGP1|GA733-1|GA7331|GP50|M1S1|TROP2 tumor associated calcium signal transducer 2 protein-coding chr17-2025 chr17 17356208 17356418 + 11.5 0.000 Intergenic Intergenic 52940 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr17-1478 chr17 80991737 80991947 + 11.5 0.000 promoter-TSS (NM_024591) promoter-TSS (NM_024591) 1 NM_024591 79643 Hs.514560 NM_024591 ENSG00000176108 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding chr10-3743 chr10 119302232 119302442 + 11.5 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) -75635 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr9-1967 chr9 94656315 94656525 + 11.5 0.000 Intergenic MER57B2|LTR|ERV1 -16171 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr6-5701 chr6 130240324 130240534 + 11.5 0.000 intron (NM_001258275, intron 2 of 13) intron (NM_001258275, intron 2 of 13) -17478 NM_001017373 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr8-2509 chr8 20002876 20003086 + 11.5 0.000 Intergenic L1MC5|LINE|L1 63728 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr17-1976 chr17 38917027 38917237 + 11.5 0.000 intron (NR_073384, intron 7 of 7) L2a|LINE|L2 2153 NR_106837 102465467 NR_106837 ENSG00000277057 MIR6779 hsa-mir-6779 microRNA 6779 ncRNA chr10-5142 chr10 51897138 51897348 + 11.5 0.000 intron (NM_001098512, intron 4 of 17) L5|LINE|RTE-X -197648 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr19-2127 chr19 2145325 2145535 + 11.5 0.000 intron (NM_003938, intron 1 of 29) MER20|DNA|hAT-Charlie 6136 NM_003938 8943 Hs.512815 NM_003938 ENSG00000065000 AP3D1 ADTD|HPS10|hBLVR adaptor related protein complex 3 subunit delta 1 protein-coding chr1-11075 chr1 227785925 227786135 + 11.5 0.000 Intergenic MIRb|SINE|MIR -29687 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr11-3650 chr11 102843645 102843855 + 11.5 0.000 promoter-TSS (NM_002422) promoter-TSS (NM_002422) -141 NM_002422 4314 Hs.375129 NM_002422 ENSG00000149968 MMP3 CHDS6|MMP-3|SL-1|STMY|STMY1|STR1 matrix metallopeptidase 3 protein-coding chr1-10030 chr1 88300094 88300304 + 11.5 0.000 Intergenic L2a|LINE|L2 -383945 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1-10599 chr1 176892491 176892701 + 11.5 0.000 intron (NM_207108, intron 17 of 21) intron (NM_207108, intron 17 of 21) 136849 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr8-3398 chr8 64887629 64887839 + 11.5 0.000 Intergenic Intergenic -88997 NM_004820 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr7-8754 chr7 77690234 77690444 + 11.5 0.000 intron (NR_134251, intron 1 of 3) AluSx3|SINE|Alu 5926 NR_134251 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr1-10226 chr1 115330106 115330316 + 11.5 0.000 intron (NM_002506, intron 1 of 2) intron (NM_002506, intron 1 of 2) 8025 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr9-3613 chr9 87594421 87594631 + 11.5 0.000 intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) 41072 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr12-5230 chr12 108226336 108226546 + 11.5 0.000 intron (NM_001304447, intron 6 of 9) intron (NM_001304447, intron 6 of 9) 94221 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chrX-1938 chrX 3032962 3033172 + 11.5 0.000 exon (NM_001011719, exon 9 of 9) exon (NM_001011719, exon 9 of 9) -7167 NM_001201538 416 Hs.101674 NM_004042 ENSG00000062096 ARSF ASF arylsulfatase F protein-coding chr21-788 chr21 45513776 45513986 + 11.5 0.000 TTS (NM_130444) TTS (NM_130444) 20875 NM_001205207 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr17-5686 chr17 50893871 50894081 + 11.5 0.000 Intergenic Intergenic -25998 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr16-2548 chr16 47461934 47462144 + 11.5 0.000 promoter-TSS (NM_001305002) promoter-TSS (NM_001305002) 708 NM_001031835 5257 Hs.78060 NM_000293 ENSG00000102893 PHKB - phosphorylase kinase regulatory subunit beta protein-coding chr3-4750 chr3 94494056 94494266 + 11.5 0.000 Intergenic ERVL-E-int|LTR|ERVL 431100 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr11-5528 chr11 89191064 89191274 + 11.5 0.000 intron (NM_000372, intron 1 of 4) intron (NM_000372, intron 1 of 4) 13294 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr18-1018 chr18 58239839 58240049 + 11.5 0.000 intron (NM_001144971, intron 3 of 30) MamGypsy2-I|LTR|Gypsy 18373 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr7-5501 chr7 43591578 43591788 + 11.5 0.000 intron (NM_004760, intron 1 of 6) intron (NM_004760, intron 1 of 6) 8575 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr13-590 chr13 112943521 112943731 + 11.5 0.000 Intergenic CpG 25012 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr2-11566 chr2 559201 559411 + 11.5 0.000 intron (NR_136169, intron 2 of 2) intron (NR_136169, intron 2 of 2) 1105 NR_136168 105373352 NR_136168 LOC105373352 - uncharacterized LOC105373352 ncRNA chr10-5537 chr10 85984001 85984211 + 11.5 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 280682 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr6-4924 chr6 97960781 97960991 + 11.5 0.000 Intergenic Intergenic -63645 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr11-3259 chr11 74523015 74523225 + 11.5 0.000 Intergenic Charlie29a|DNA|hAT-Charlie -29396 NM_001144869 387787 Hs.591971 NM_001144869 ENSG00000175536 LIPT2 - lipoyl(octanoyl) transferase 2 protein-coding chr4-3683 chr4 48602862 48603072 + 11.5 0.000 intron (NM_015030, intron 12 of 63) Tigger3a|DNA|TcMar-Tigger 112715 NM_175619 326340 Hs.276457 NM_175619 ENSG00000182223 ZAR1 Z3CXXC6 zygote arrest 1 protein-coding chr18-1058 chr18 22847532 22847742 + 11.5 0.000 Intergenic Intergenic -60800 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr16-1007 chr16 67660621 67660831 + 11.5 0.000 promoter-TSS (NM_016948) promoter-TSS (NM_016948) -234 NM_016948 50855 Hs.112933 NM_016948 ENSG00000102981 PARD6A PAR-6A|PAR6|PAR6C|PAR6alpha|TAX40|TIP-40 par-6 family cell polarity regulator alpha protein-coding chr9-2127 chr9 105064731 105064941 + 11.5 0.000 Intergenic Intergenic -136681 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr10-4372 chr10 35827760 35827970 + 11.5 0.000 Intergenic Intergenic 49563 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr8-3632 chr8 549106 549316 + 11.5 0.000 Intergenic L1M2|LINE|L1 -3430 NM_175075 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr16-2326 chr16 29721587 29721797 + 11.5 0.000 Intergenic LTR13|LTR|ERVK 24298 NM_175900 283897 Hs.331095 NM_175900 ENSG00000185905 C16orf54 - chromosome 16 open reading frame 54 protein-coding chr8-3062 chr8 16748969 16749179 + 11.5 0.000 Intergenic Intergenic 253271 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr1-4768 chr1 10831204 10831414 + 11.5 0.000 Intergenic Intergenic -34663 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr20-635 chr20 50269848 50270058 + 11.5 0.000 intron (NM_001278655, intron 1 of 3) L2|LINE|L2 2467 NM_001278655 100506115 Hs.235484 NM_001278655 SMIM25 GCRL1|LINC01272 small integral membrane protein 25 protein-coding chr18-1850 chr18 24132400 24132610 + 11.5 0.000 exon (NM_153211, exon 14 of 14) exon (NM_153211, exon 14 of 14) -6451 NM_001308231 26256 Hs.511983 NM_012189 ENSG00000154040 CABYR CABYRa|CABYRc|CABYRc/d|CABYRe|CBP86|CT88|FSP-2|FSP2 calcium binding tyrosine phosphorylation regulated protein-coding chr8-5500 chr8 56033600 56033810 + 11.5 0.000 Intergenic Intergenic 40196 NR_002437 26795 NR_002437 ENSG00000238650 SNORD54 RNU54|U54 small nucleolar RNA, C/D box 54 snoRNA chr5-3005 chr5 5749134 5749344 + 11.5 0.000 Intergenic Intergenic 326562 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr1-3411 chr1 236534281 236534491 + 11.5 0.000 intron (NM_201543, intron 3 of 10) intron (NM_201543, intron 3 of 10) -9878 NR_034040 100287902 Hs.677376 NR_034040 ENSG00000223776 LGALS8-AS1 - LGALS8 antisense RNA 1 ncRNA chr9-5095 chr9 34928431 34928641 + 11.5 0.000 Intergenic Intergenic -28951 NM_001304333 23349 Hs.7989 NM_015297 ENSG00000122733 PHF24 - PHD finger protein 24 protein-coding chr7-5176 chr7 7288843 7289053 + 11.5 0.000 Intergenic LTR82B|LTR|ERVL 33794 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr1-4400 chr1 183822190 183822400 + 11.5 0.000 intron (NM_001297671, intron 2 of 17) intron (NM_001297671, intron 2 of 17) 17175 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr1-8361 chr1 62089158 62089368 + 11.5 0.000 intron (NM_001350145, intron 33 of 43) intron (NM_001350145, intron 33 of 43) -10407 NR_036059 100422946 NR_036059 ENSG00000283690 MIR3116-2 - microRNA 3116-2 ncRNA chr17-5446 chr17 39547859 39548069 + 11.5 0.000 Intergenic Intergenic 59956 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr8-2592 chr8 50634077 50634287 + 11.5 0.000 intron (NR_135797, intron 15 of 20) HERVL40-int|LTR|ERVL 470051 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr11-5027 chr11 82943687 82943897 + 11.5 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -42052 NM_001319214 5547 Hs.523936 NM_005040 ENSG00000137509 PRCP HUMPCP|PCP prolylcarboxypeptidase protein-coding chr5-4681 chr5 38309469 38309679 + 11.5 0.000 intron (NM_152403, intron 1 of 21) intron (NM_152403, intron 1 of 21) -18588 NR_046219 100852408 Hs.570954 NR_046219 ENSG00000248730 EGFLAM-AS4 - EGFLAM antisense RNA 4 ncRNA chr2-5989 chr2 69873853 69874063 + 11.5 0.000 intron (NM_178439, intron 13 of 13) L1ME4a|LINE|L1 -19998 NM_006857 11017 Hs.54649 NM_006857 ENSG00000124380 SNRNP27 27K|RY1 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 protein-coding chr19-6536 chr19 18797038 18797248 + 11.5 0.000 Intergenic (CCCT)n|Simple_repeat|Simple_repeat -5838 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr22-1356 chr22 28247057 28247267 + 11.5 0.000 intron (NM_001145418, intron 5 of 22) intron (NM_001145418, intron 5 of 22) -212707 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr2-4193 chr2 197287396 197287606 + 11.5 0.000 intron (NR_046837, intron 5 of 5) intron (NR_046837, intron 5 of 5) 15018 NR_046837 101927547 Hs.687027 NR_046837 ENSG00000236977 ANKRD44-IT1 - ANKRD44 intronic transcript 1 ncRNA chr3-1553 chr3 197367412 197367622 + 11.5 0.000 Intergenic Intergenic -68196 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr19-3823 chr19 10475356 10475566 + 11.5 0.000 Intergenic Intergenic 22529 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr7-3566 chr7 20351936 20352146 + 11.5 0.000 intron (NM_002214, intron 1 of 13) intron (NM_002214, intron 1 of 13) -20279 NR_110120 101927811 Hs.285724 NR_110119 ENSG00000271133 LOC101927811 - uncharacterized LOC101927811 ncRNA chr1-5796 chr1 180310160 180310370 + 11.5 0.000 intron (NM_032360, intron 7 of 7) AluJr|SINE|Alu -35584 NR_037642 100527964 Hs.496545 NR_037642 ENSG00000230124 LHX4-AS1 - LHX4 antisense RNA 1 ncRNA chr5-4091 chr5 66807818 66808028 + 11.5 0.000 intron (NM_001290228, intron 3 of 4) intron (NM_001290228, intron 3 of 4) -20850 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr2-7242 chr2 225587026 225587236 + 11.5 0.000 intron (NM_001371273, intron 5 of 7) THE1D|LTR|ERVL-MaLR 186245 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr7-9585 chr7 147507008 147507218 + 11.5 0.000 intron (NM_014141, intron 10 of 22) intron (NM_014141, intron 10 of 22) -128992 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr8-1058 chr8 26638395 26638605 + 11.5 0.000 intron (NM_001244604, intron 8 of 13) intron (NM_001244604, intron 8 of 13) 60095 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr1-4391 chr1 172561164 172561374 + 11.5 0.000 intron (NM_014283, intron 6 of 23) MER66-int|LTR|ERV1 28119 NM_014283 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding chr10-5406 chr10 75662842 75663052 + 11.5 0.000 intron (NR_131178, intron 1 of 7) intron (NR_131178, intron 1 of 7) 15438 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr18-1287 chr18 61199096 61199306 + 11.5 0.000 Intergenic Intergenic -134229 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr10-4673 chr10 129614263 129614473 + 11.5 0.000 intron (NM_002412, intron 2 of 4) intron (NM_002412, intron 2 of 4) 147127 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr12-802 chr12 6778979 6779189 + 11.5 0.000 TTS (NM_002286) TTS (NM_002286) 6564 NM_002286 3902 Hs.409523 NM_002286 ENSG00000089692 LAG3 CD223 lymphocyte activating 3 protein-coding chr8-3954 chr8 47876038 47876248 + 11.5 0.000 intron (NM_001081640, intron 40 of 84) L1MB8|LINE|L1 83993 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr9-3111 chr9 71604473 71604683 + 11.5 0.000 Intergenic Intergenic -157607 NM_001366144 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr8-4646 chr8 134685554 134685764 + 11.5 0.000 intron (NM_001289394, intron 1 of 16) intron (NM_001289394, intron 1 of 16) 10896 NM_001167583 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding chr14-1495 chr14 39492310 39492520 + 11.5 0.000 Intergenic MSTD|LTR|ERVL-MaLR -59915 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr3-5730 chr3 17869671 17869881 + 11.5 0.000 Intergenic Intergenic -92776 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr13-2311 chr13 32278548 32278758 + 11.5 0.000 intron (NM_023037, intron 58 of 60) intron (NM_023037, intron 58 of 60) 33301 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr7-8354 chr7 43928664 43928874 + 11.5 0.000 intron (NM_015983, intron 1 of 6) L2c|LINE|L2 2333 NM_015983 51619 Hs.19196 NM_015983 ENSG00000078967 UBE2D4 HBUCE1 ubiquitin conjugating enzyme E2 D4 (putative) protein-coding chr13-1558 chr13 32229822 32230032 + 11.5 0.000 intron (NM_023037, intron 40 of 60) intron (NM_023037, intron 40 of 60) 82027 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr17-2844 chr17 20174659 20174869 + 11.5 0.000 intron (NM_001033554, intron 1 of 5) intron (NM_001033554, intron 1 of 5) 18692 NM_001033554 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr18-518 chr18 50784894 50785104 + 11.5 0.000 Intergenic Intergenic 35017 NM_031939 83876 Hs.30495 NM_031939 ENSG00000134042 MRO B29|C18orf3 maestro protein-coding chr15-2118 chr15 70526835 70527045 + 11.5 0.000 Intergenic Intergenic -21012 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr6-4017 chr6 122585223 122585433 + 11.5 0.000 intron (NM_001270393, intron 3 of 7) intron (NM_001270393, intron 3 of 7) -24904 NM_032471 5570 Hs.741340 NM_032471 ENSG00000135549 PKIB PRKACN2 cAMP-dependent protein kinase inhibitor beta protein-coding chr16-2373 chr16 64589873 64590083 + 11.5 0.000 Intergenic MARNA|DNA|TcMar-Mariner 532085 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr6-5298 chr6 141729270 141729480 + 11.5 0.000 Intergenic MER67D|LTR|ERV1 359424 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr2-2790 chr2 17171550 17171760 + 11.5 0.000 Intergenic Intergenic 346785 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr12-3988 chr12 21248637 21248847 + 11.5 0.000 Intergenic MER61E|LTR|ERV1 86175 NM_021094 6579 Hs.46440 NM_005075 ENSG00000084453 SLCO1A2 OATP|OATP-A|OATP1A2|SLC21A3 solute carrier organic anion transporter family member 1A2 protein-coding chr5-5687 chr5 161561258 161561468 + 11.5 0.000 Intergenic Intergenic -12959 NM_000813 2561 Hs.303527 NM_000813 ENSG00000145864 GABRB2 ICEE2 gamma-aminobutyric acid type A receptor beta2 subunit protein-coding chr14-828 chr14 22900175 22900385 + 11.5 0.000 3' UTR (NM_001352766, exon 16 of 16) 3' UTR (NM_001352766, exon 16 of 16) 17058 NM_173527 161253 Hs.444911 NM_173527 ENSG00000139890 REM2 - RRAD and GEM like GTPase 2 protein-coding chr1-10703 chr1 192100297 192100507 + 11.5 0.000 Intergenic L2|LINE|L2 -58060 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr21-534 chr21 41134087 41134297 + 11.5 0.000 Intergenic Intergenic 13872 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr5-3069 chr5 34452174 34452384 + 11.5 0.000 Intergenic Intergenic -204049 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr12-4089 chr12 55862463 55862673 + 11.5 0.000 Intergenic AluJb|SINE|Alu -19632 NM_002429 4327 Hs.591033 NM_002429 ENSG00000123342 MMP19 CODA|MMP18|RASI-1 matrix metallopeptidase 19 protein-coding chrX-1142 chrX 37793000 37793210 + 11.5 0.000 intron (NM_000397, intron 4 of 12) MIR|SINE|MIR 13088 NM_000397 1536 Hs.292356 NM_000397 ENSG00000165168 CYBB AMCBX2|CGD|GP91-1|GP91-PHOX|GP91PHOX|IMD34|NOX2|p91-PHOX cytochrome b-245 beta chain protein-coding chr5-5562 chr5 148795029 148795239 + 11.5 0.000 Intergenic Intergenic -31459 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr8-4504 chr8 119822547 119822757 + 11.5 0.000 intron (NM_003184, intron 2 of 25) intron (NM_003184, intron 2 of 25) 10189 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr1-4632 chr1 168428405 168428615 + 11.5 0.000 Intergenic Intergenic -5854 NR_037851 100505918 Hs.568494 NR_037851 LOC100505918 - uncharacterized LOC100505918 ncRNA chr3-1686 chr3 15728870 15729080 + 11.5 0.000 intron (NM_001349280, intron 5 of 26) MLT1I|LTR|ERVL-MaLR 27572 NM_001195099 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr15-1531 chr15 62887212 62887422 + 11.5 0.000 Intergenic Intergenic 63360 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr13-2587 chr13 72746859 72747069 + 11.5 0.000 exon (NM_001286746, exon 10 of 12) exon (NM_001286746, exon 10 of 12) 19041 NM_001286746 79866 Hs.643464 NM_024808 ENSG00000136122 BORA C13orf34 BORA aurora kinase A activator protein-coding chr6-3922 chr6 75773354 75773564 + 11.5 0.000 intron (NM_001300899, intron 1 of 32) intron (NM_001300899, intron 1 of 32) 24220 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr15-4894 chr15 76678883 76679093 + 11.5 0.000 intron (NR_148227, intron 20 of 32) intron (NR_148227, intron 20 of 32) 92341 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr1-4829 chr1 24610592 24610802 + 11.5 0.000 Intergenic MIRb|SINE|MIR -32605 NM_001366588 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr13-2591 chr13 73337108 73337318 + 11.5 0.000 Intergenic MER20|DNA|hAT-Charlie -227031 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr7-6394 chr7 152766205 152766415 + 11.5 0.000 intron (NM_001350942, intron 1 of 11) MER68|LTR|ERVL 6558 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr18-958 chr18 31667666 31667876 + 11.5 0.000 intron (NM_004775, intron 1 of 8) intron (NM_004775, intron 1 of 8) 16974 NM_001330570 9331 Hs.591063 NM_004775 ENSG00000118276 B4GALT6 B4Gal-T6|beta4Gal-T6 beta-1,4-galactosyltransferase 6 protein-coding chr21-1049 chr21 27590419 27590629 + 11.5 0.000 Intergenic Intergenic -131855 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr15-1516 chr15 56837499 56837709 + 11.5 0.000 Intergenic Intergenic -80486 NM_001322151 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chrX-5017 chrX 119290790 119291000 + 11.5 0.000 promoter-TSS (NR_110396) promoter-TSS (NR_110396) -634 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr7-3067 chr7 155805394 155805604 + 11.5 0.000 intron (NM_000193, intron 2 of 2) CpG 3573 NR_132318 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr2-7853 chr2 49025819 49026029 + 11.5 0.000 intron (NM_000145, intron 2 of 9) intron (NM_000145, intron 2 of 9) -33679 NR_107011 102465854 NR_107011 ENSG00000212036 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA chr7-1695 chr7 157235542 157235752 + 11.5 0.000 intron (NM_014671, intron 18 of 22) intron (NM_014671, intron 18 of 22) 96721 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr8-2124 chr8 143471390 143471600 + 11.5 0.000 intron (NM_015117, intron 5 of 11) intron (NM_015117, intron 5 of 11) 34753 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr3-1821 chr3 53880461 53880671 + 11.5 0.000 intron (NM_022899, intron 1 of 12) MIR|SINE|MIR 1586 NM_022899 93973 Hs.412186 NM_022899 ENSG00000113812 ACTR8 ARP8|INO80N|hArp8 actin related protein 8 protein-coding chr4-4879 chr4 115748751 115748961 + 11.5 0.000 Intergenic L1PA7|LINE|L1 -550869 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr1-3347 chr1 46402150 46402360 + 11.5 0.000 intron (NM_001441, intron 2 of 14) intron (NM_001441, intron 2 of 14) 7938 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr11-5513 chr11 85887113 85887323 + 11.5 0.000 intron (NM_001286159, intron 5 of 10) intron (NM_001286159, intron 5 of 10) 32117 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr17-5042 chr17 2272129 2272339 + 11.5 0.000 intron (NM_017575, intron 8 of 18) L2c|LINE|L2 -6049 NM_001256827 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr22-2229 chr22 24105700 24105910 + 11.5 0.000 intron (NM_012295, intron 26 of 36) intron (NM_012295, intron 26 of 36) -75682 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr6-2839 chr6 236151 236361 + 11.5 0.000 Intergenic Intergenic -30772 NR_126020 285766 Hs.657946 NR_126020 ENSG00000263667 LOC285766 - uncharacterized LOC285766 ncRNA chr3-4247 chr3 141556247 141556457 + 11.5 0.000 intron (NM_006506, intron 7 of 23) MIRc|SINE|MIR 69325 NM_001303245 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr7-2425 chr7 100202393 100202603 + 11.5 0.000 non-coding (NR_028039, exon 8 of 8) non-coding (NR_028039, exon 8 of 8) -16750 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr8-4585 chr8 129680242 129680452 + 11.5 0.000 promoter-TSS (NR_130917) promoter-TSS (NR_130917) -108 NR_130917 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr6-3698 chr6 165477623 165477833 + 11.5 0.000 intron (NM_006661, intron 4 of 22) L3|LINE|CR1 -168123 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr19-2911 chr19 1295661 1295871 + 11.5 0.000 exon (NM_001405, exon 2 of 4) exon (NM_001405, exon 2 of 4) 9893 NM_001405 1943 NM_001405 ENSG00000099617 EFNA2 ELF-1|EPLG6|HEK7-L|LERK-6|LERK6 ephrin A2 protein-coding chr7-6036 chr7 109256826 109257036 + 11.5 0.000 Intergenic MIR|SINE|MIR -372344 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr17-6342 chr17 74725559 74725769 + 11.5 0.000 intron (NM_175738, intron 1 of 8) AluSx1|SINE|Alu -10896 NM_001330471 326624 Hs.351413 NM_175738 ENSG00000172794 RAB37 - RAB37, member RAS oncogene family protein-coding chr7-7873 chr7 5655608 5655818 + 11.5 0.000 intron (NM_207111, intron 13 of 16) intron (NM_207111, intron 13 of 16) 24748 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr2-9327 chr2 224957716 224957926 + 11.5 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) -10772 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr6-3869 chr6 46559380 46559590 + 11.5 0.000 intron (NM_016593, intron 10 of 11) intron (NM_016593, intron 10 of 11) -67418 NM_001251973 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr2-5650 chr2 195976889 195977099 + 11.5 0.000 intron (NM_018897, intron 15 of 64) L1MA3|LINE|L1 91843 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr9-1243 chr9 6758930 6759140 + 11.5 0.000 intron (NR_148680, intron 1 of 21) intron (NR_148680, intron 1 of 21) 1685 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr1-10018 chr1 86592425 86592635 + 11.5 0.000 intron (NR_135837, intron 4 of 4) MSTA|LTR|ERVL-MaLR -41746 NR_024604 9629 Hs.673847 NM_004921 ENSG00000153923 CLCA3P CLCA3 chloride channel accessory 3, pseudogene pseudo chr2-9213 chr2 217685320 217685530 + 11.5 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 71168 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chrX-669 chrX 150694435 150694645 + 11.5 0.000 intron (NR_148676, intron 1 of 16) intron (NR_148676, intron 1 of 16) 1144 NR_148676 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr5-2615 chr5 141478012 141478222 + 11.5 0.000 exon (NM_032402, exon 1 of 1) exon (NM_032402, exon 1 of 1) 2151 NM_002588 5098 Hs.368160 NM_002588 ENSG00000240184 PCDHGC3 PC43|PCDH-GAMMA-C3|PCDH2 protocadherin gamma subfamily C, 3 protein-coding chr3-4887 chr3 177977984 177978194 + 11.5 0.000 Intergenic Intergenic 161224 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr3-2363 chr3 159866128 159866338 + 11.5 0.000 exon (NM_001197108, exon 2 of 7) exon (NM_001197108, exon 2 of 7) 26372 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr13-1867 chr13 23618312 23618522 + 11.5 0.000 intron (NM_001354985, intron 4 of 8) L1MB8|LINE|L1 39057 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr3-3036 chr3 123138905 123139115 + 11.5 0.000 intron (NM_006810, intron 11 of 16) intron (NM_006810, intron 11 of 16) -22784 NR_106960 102465667 NR_106960 ENSG00000284421 MIR7110 hsa-mir-7110 microRNA 7110 ncRNA chr3-5521 chr3 196671351 196671561 + 11.5 0.000 Intergenic Intergenic 31762 NM_198565 375387 Hs.702186 NM_198565 ENSG00000174004 NRROS ELLP3030|GARPL1|LRRC33|UNQ3030 negative regulator of reactive oxygen species protein-coding chr20-938 chr20 19212967 19213177 + 11.5 0.000 intron (NM_020689, intron 1 of 16) CpG 430 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr9-3095 chr9 34653306 34653516 + 11.5 0.000 promoter-TSS (NR_052010) promoter-TSS (NR_052010) -486 NR_052010 3590 Hs.591088 NM_004512 ENSG00000137070 IL11RA CRSDA interleukin 11 receptor subunit alpha protein-coding chr1-4886 chr1 34559205 34559415 + 11.5 0.000 Intergenic Intergenic 110384 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr17-4514 chr17 75146747 75146957 + 11.5 0.000 intron (NM_001002033, intron 4 of 5) intron (NM_001002033, intron 4 of 5) 6441 NM_001288610 51155 Hs.532803 NM_016185 ENSG00000189159 JPT1 ARM2|HN1|HN1A Jupiter microtubule associated homolog 1 protein-coding chr3-5613 chr3 9612802 9613012 + 11.5 0.000 Intergenic MSTA|LTR|ERVL-MaLR -36598 NM_022485 64419 Hs.475382 NM_022485 ENSG00000163719 MTMR14 C3orf29 myotubularin related protein 14 protein-coding chr7-9145 chr7 111266637 111266847 + 11.5 0.000 intron (NM_032549, intron 3 of 5) LTR86A2|LTR|ERVL 175615 NM_018334 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr17-2874 chr17 32828875 32829085 + 11.5 0.000 intron (NM_015194, intron 1 of 21) MIR|SINE|MIR 48144 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr3-2258 chr3 52214669 52214879 + 11.5 0.000 TTS (NM_000688) TTS (NM_000688) 11389 NM_017442 54106 Hs.87968 NM_017442 ENSG00000239732 TLR9 CD289 toll like receptor 9 protein-coding chr14-1231 chr14 100133201 100133411 + 11.5 0.000 intron (NM_001330221, intron 8 of 13) intron (NM_001330221, intron 8 of 13) 23651 NR_029888 442909 NR_029888 ENSG00000199082 MIR342 MIRN342|hsa-mir-342 microRNA 342 ncRNA chr19-3499 chr19 39608494 39608704 + 11.5 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 6075 NM_013268 29124 Hs.23671 NM_013268 ENSG00000105198 LGALS13 GAL13|PLAC8|PP13 galectin 13 protein-coding chr1-10452 chr1 160706016 160706226 + 11.5 0.000 intron (NM_001778, intron 1 of 3) AluSq2|SINE|Alu 5701 NM_001778 962 Hs.243564 NM_001778 ENSG00000117091 CD48 BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48 CD48 molecule protein-coding chr7-4519 chr7 1284895 1285105 + 11.5 0.000 Intergenic Intergenic 52128 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr7-1445 chr7 64541707 64541917 + 11.5 0.000 intron (NM_001130022, intron 3 of 3) L1M3a|LINE|L1 21259 NM_178558 340252 Hs.520886 NM_178558 ENSG00000173041 ZNF680 - zinc finger protein 680 protein-coding chr12-1748 chr12 58204094 58204304 + 11.5 0.000 Intergenic Intergenic 116307 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chr2-1930 chr2 205734480 205734690 + 11.5 0.000 intron (NM_018534, intron 7 of 15) intron (NM_018534, intron 7 of 15) 52084 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr1-9498 chr1 37318744 37318954 + 11.5 0.000 Intergenic Intergenic 155594 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr3-4668 chr3 42214979 42215189 + 11.5 0.000 intron (NM_001349247, intron 14 of 16) intron (NM_001349247, intron 14 of 16) 48863 NM_001174138 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr5-2896 chr5 118553733 118553943 + 11.5 0.000 intron (NR_104610, intron 1 of 9) intron (NR_104610, intron 1 of 9) 8279 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chr5-3429 chr5 151523457 151523667 + 11.5 0.000 intron (NM_001447, intron 17 of 22) intron (NM_001447, intron 17 of 22) -1414 NR_106752 102465246 NR_106752 ENSG00000276622 MIR6499 hsa-mir-6499|mir-6499 microRNA 6499 ncRNA chr4-4960 chr4 129389482 129389692 + 11.5 0.000 Intergenic L2c|LINE|L2 293435 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr3-1648 chr3 125374629 125374839 + 11.5 0.000 promoter-TSS (NM_001348432) promoter-TSS (NM_001348432) -25 NM_001348432 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr13-1097 chr13 99571815 99572025 + 11.5 0.000 Intergenic Intergenic -5192 NR_126390 104355149 Hs.639387 NR_126390 LINC01039 - long intergenic non-protein coding RNA 1039 ncRNA chr5-2328 chr5 62315542 62315752 + 11.5 0.000 intron (NM_001243952, intron 2 of 20) intron (NM_001243952, intron 2 of 20) 9485 NM_001243952 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr8-1480 chr8 33216469 33216679 + 11.5 0.000 Intergenic Intergenic 256572 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr3-3809 chr3 16333108 16333318 + 11.5 0.000 intron (NM_015150, intron 7 of 9) Tigger17a|DNA|TcMar-Tigger 68001 NR_148220 92106 Hs.655449 NM_138381 ENSG00000154814 OXNAD1 - oxidoreductase NAD binding domain containing 1 protein-coding chr7-4572 chr7 6630771 6630981 + 11.5 0.000 Intergenic AluJo|SINE|Alu -6442 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding chr4-1798 chr4 15074255 15074465 + 11.5 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) 71879 NM_001177384 132864 Hs.656937 NM_182485 ENSG00000137449 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding chr8-1982 chr8 79554025 79554235 + 11.5 0.000 Intergenic L1M4c|LINE|L1 -56987 NM_007029 11075 Hs.521651 NM_007029 ENSG00000104435 STMN2 SCG10|SCGN10 stathmin 2 protein-coding chr13-1140 chr13 29745948 29746158 + 11.5 0.000 Intergenic L1MEj|LINE|L1 98360 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chr18-1917 chr18 33558612 33558822 + 11.5 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -19502 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr7-3636 chr7 42345751 42345961 + 11.5 0.000 Intergenic Intergenic -108647 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr6-5155 chr6 125719497 125719707 + 11.5 0.000 non-coding (NR_038906, exon 4 of 4) non-coding (NR_038906, exon 4 of 4) -30030 NM_012259 23493 Hs.144287 NM_012259 ENSG00000135547 HEY2 CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32 hes related family bHLH transcription factor with YRPW motif 2 protein-coding chr12-4122 chr12 65926777 65926987 + 11.5 0.000 intron (NM_001300918, intron 3 of 4) intron (NM_001300918, intron 3 of 4) -44557 NR_158985 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chrX-845 chrX 121308473 121308683 + 11.5 0.000 Intergenic Intergenic -62394 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr11-9928 chr11 75681001 75681211 + 11.5 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -12672 NM_207577 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr1-1284 chr1 202810844 202811054 + 11.5 0.000 promoter-TSS (NR_046326) promoter-TSS (NR_046326) 3 NR_046326 100506696 Hs.23459 NR_046325 ENSG00000228288 PCAT6 KDM5B-AS1|KDM5BAS1|PCAN-R1|ncRNA-a2|onco-lncRNA-96 prostate cancer associated transcript 6 ncRNA chr18-1979 chr18 39464027 39464237 + 11.5 0.000 intron (NR_024391, intron 3 of 3) intron (NR_024391, intron 3 of 3) 158043 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr3-6595 chr3 125415473 125415683 + 11.5 0.000 Intergenic Intergenic -40224 NM_001348428 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chrX-2125 chrX 30288157 30288367 + 11.5 0.000 Intergenic MamRep137|DNA|TcMar-Tigger 21128 NM_000475 190 Hs.268490 NM_000475 ENSG00000169297 NR0B1 AHC|AHCH|AHX|DAX-1|DAX1|DSS|GTD|HHG|NROB1|SRXY2 nuclear receptor subfamily 0 group B member 1 protein-coding chr11-1302 chr11 47355417 47355627 + 11.5 0.000 exon (NM_003120, exon 5 of 5) exon (NM_003120, exon 5 of 5) -2820 NM_000256 4607 Hs.524906 NM_000256 ENSG00000134571 MYBPC3 CMD1MM|CMH4|FHC|LVNC10|MYBP-C myosin binding protein C, cardiac protein-coding chr2-5500 chr2 143473245 143473455 + 11.5 0.000 intron (NM_018460, intron 8 of 13) intron (NM_018460, intron 8 of 13) 343931 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr12-1547 chr12 99498846 99499056 + 11.5 0.000 intron (NM_152788, intron 10 of 25) intron (NM_152788, intron 10 of 25) -148802 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr1-3339 chr1 32539173 32539383 + 11.5 0.000 promoter-TSS (NM_001291496) promoter-TSS (NM_001291496) -149 NM_001040441 653121 Hs.546479 NM_144621 ENSG00000160062 ZBTB8A BOZF1|ZBTB8|ZNF916A zinc finger and BTB domain containing 8A protein-coding chr4-2147 chr4 81054052 81054262 + 11.5 0.000 3' UTR (NM_001201, exon 3 of 3) 3' UTR (NM_001201, exon 3 of 3) 23449 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr11-2605 chr11 132448344 132448554 + 11.5 0.000 intron (NM_002545, intron 3 of 6) intron (NM_002545, intron 3 of 6) 164147 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr17-2893 chr17 40345954 40346164 + 11.5 0.000 intron (NM_001024809, intron 1 of 7) intron (NM_001024809, intron 1 of 7) -2923 NR_110861 101929693 Hs.655717 NR_110861 ENSG00000265666 RARA-AS1 - RARA antisense RNA 1 ncRNA chr2-3285 chr2 58656995 58657205 + 11.5 0.000 intron (NR_033873, intron 2 of 13) intron (NR_033873, intron 2 of 13) 136347 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr11-1991 chr11 36258817 36259027 + 11.5 0.000 Intergenic Intergenic 30502 NM_001307932 29099 Hs.99443 NM_014186 ENSG00000110442 COMMD9 C11orf55|HSPC166|LINC00610 COMM domain containing 9 protein-coding chr3-3128 chr3 152222393 152222603 + 11.5 0.000 Intergenic L1MEf|LINE|L1 -17069 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr17-3217 chr17 6555142 6555352 + 11.5 0.000 intron (NM_031220, intron 1 of 19) intron (NM_031220, intron 1 of 19) 1308 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr19-4804 chr19 35120517 35120727 + 11.5 0.000 intron (NM_005971, intron 3 of 8) MER113|DNA|hAT-Charlie -2078 NR_106947 102466205 NR_106947 ENSG00000284065 MIR6887 hsa-mir-6887 microRNA 6887 ncRNA KI270736.1-19 KI270736.1 110408 110618 + 11.5 0.000 NA NA NA NA chr7-5689 chr7 67136266 67136476 + 11.5 0.000 intron (NR_134540, intron 12 of 14) intron (NR_134540, intron 12 of 14) -21974 NR_039793 100616310 NR_039793 ENSG00000266525 MIR4650-1 - microRNA 4650-1 ncRNA chr20-807 chr20 32509645 32509855 + 11.5 0.000 promoter-TSS (NR_110619) promoter-TSS (NR_110619) -209 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr14-629 chr14 39368375 39368585 + 11.5 0.000 intron (NM_001354155, intron 22 of 22) intron (NM_001354155, intron 22 of 22) 64020 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr10-3389 chr10 28326641 28326851 + 11.5 0.000 Intergenic Intergenic -23682 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr4-1895 chr4 15498381 15498591 + 11.5 0.000 intron (NM_001080522, intron 5 of 37) intron (NM_001080522, intron 5 of 37) 28604 NM_001164720 57545 Hs.590928 NM_020785 ENSG00000048342 CC2D2A JBTS9|MKS6 coiled-coil and C2 domain containing 2A protein-coding chr19-3459 chr19 31724582 31724792 + 11.5 0.000 Intergenic Charlie1a|DNA|hAT-Charlie 132406 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr13-1651 chr13 67343643 67343853 + 11.5 0.000 Intergenic HERVP71A-int|LTR|ERV1 -28639 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr2-8847 chr2 173580835 173581045 + 11.5 0.000 Intergenic L1ME2|LINE|L1 226068 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr14-1356 chr14 102655272 102655482 + 11.5 0.000 intron (NM_015156, intron 2 of 11) intron (NM_015156, intron 2 of 11) 62728 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr15-890 chr15 98914727 98914937 + 11.5 0.000 intron (NM_000875, intron 8 of 20) intron (NM_000875, intron 8 of 20) 90824 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr4-2782 chr4 20453609 20453819 + 11.5 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 61525 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr9-1749 chr9 129490007 129490217 + 11.5 0.000 intron (NR_038955, intron 1 of 4) intron (NR_038955, intron 1 of 4) 1452 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr19-1995 chr19 12744077 12744287 + 11.5 0.000 intron (NM_004317, intron 2 of 6) AluSp|SINE|Alu 6685 NM_004317 439 Hs.465985 NM_004317 ENSG00000198356 GET3 ARSA-I|ARSA1|ASNA-I|ASNA1|TRC40 guided entry of tail-anchored proteins factor 3, ATPase protein-coding chr5-1431 chr5 11055078 11055288 + 11.5 0.000 intron (NM_001288715, intron 15 of 20) intron (NM_001288715, intron 15 of 20) -293949 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr6-1233 chr6 138107331 138107541 + 11.5 0.000 promoter-TSS (NM_022121) promoter-TSS (NM_022121) -17 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1 p53 apoptosis effector related to PMP22 protein-coding chr16-4428 chr16 52601020 52601230 + 11.5 0.000 intron (NR_033920, intron 1 of 3) intron (NR_033920, intron 1 of 3) 5850 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr12-1328 chr12 64160701 64160911 + 11.5 0.000 3' UTR (NM_020762, exon 22 of 22) 3' UTR (NM_020762, exon 22 of 22) 61490 NM_152440 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr11-3677 chr11 133064397 133064607 + 11.5 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -120734 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr20-3483 chr20 58906906 58907116 + 11.5 0.000 intron (NM_080425, intron 6 of 12) intron (NM_080425, intron 6 of 12) 14848 NR_132272 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|PITA3|POH|SCG6|SgVI GNAS complex locus protein-coding chr17-3805 chr17 40538534 40538744 + 11.5 0.000 Intergenic Intergenic 21755 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr10-2994 chr10 93308181 93308391 + 11.5 0.000 intron (NM_013451, intron 53 of 53) intron (NM_013451, intron 53 of 53) 174048 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr5-871 chr5 173144278 173144488 + 11.5 0.000 promoter-TSS (NM_001205) promoter-TSS (NM_001205) -148 NM_013980 662 Hs.145726 NM_001205 ENSG00000113734 BNIP1 NIP1|SEC20|TRG-8 BCL2 interacting protein 1 protein-coding chr11-3663 chr11 119994560 119994770 + 11.5 0.000 Intergenic Intergenic 134188 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr3-2672 chr3 45775717 45775927 + 11.5 0.000 exon (NM_020208, exon 4 of 11) exon (NM_020208, exon 4 of 11) 20714 NM_020208 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr6-2065 chr6 113495648 113495858 + 11.5 0.000 Intergenic Intergenic -62306 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr2-6702 chr2 25439884 25440094 + 11.5 0.000 intron (NM_033147, intron 12 of 19) intron (NM_033147, intron 12 of 19) -97399 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr19-1611 chr19 40420824 40421034 + 11.5 0.000 TTS (NM_013376) TTS (NM_013376) 5063 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1|TRIPBR1 SERTA domain containing 1 protein-coding chr22-2882 chr22 45864401 45864611 + 11.5 0.000 Intergenic Intergenic 103982 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr3-5761 chr3 22544835 22545045 + 11.5 0.000 Intergenic MLT1J2-int|LTR|ERVL-MaLR 587801 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr2-2356 chr2 217256409 217256619 + 11.5 0.000 Intergenic Intergenic -26219 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr8-3957 chr8 48212159 48212369 + 11.5 0.000 Intergenic L1PBa|LINE|L1 203833 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr12-2647 chr12 706630 706840 + 11.5 0.000 Intergenic AluSx3|SINE|Alu -43290 NM_016533 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chr5-4901 chr5 68085889 68086099 + 11.5 0.000 Intergenic Intergenic -103882 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr6-2382 chr6 141789439 141789649 + 11.5 0.000 Intergenic L1MA3|LINE|L1 299255 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr4-3448 chr4 94676430 94676640 + 11.5 0.000 Intergenic Intergenic 80998 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr6-7563 chr6 71982641 71982851 + 11.5 0.000 intron (NM_001350411, intron 2 of 3) intron (NM_001350411, intron 2 of 3) 96043 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr2-6155 chr2 237596483 237596693 + 11.5 0.000 Intergenic MER115|DNA|hAT-Tip100 -5854 NM_022449 64284 Hs.44278 NM_022449 ENSG00000124839 RAB17 - RAB17, member RAS oncogene family protein-coding chr7-7930 chr7 8724012 8724222 + 11.5 0.000 intron (NM_152745, intron 2 of 2) intron (NM_152745, intron 2 of 2) 290508 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr9-2143 chr9 114874808 114875018 + 11.5 0.000 Intergenic Intergenic 55682 NM_001252290 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr6-5401 chr6 155077366 155077576 + 11.5 0.000 Intergenic Intergenic -12818 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr16-4218 chr16 13348517 13348727 + 11.5 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 447024 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr3-10867 chr3 169065191 169065401 + 11.5 0.000 Intergenic Intergenic 80227 NM_001366472 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr6-4289 chr6 13530989 13531199 + 11.5 0.000 Intergenic Intergenic -43435 NM_001242827 23408 Hs.567431 NM_012241 ENSG00000124523 SIRT5 SIR2L5 sirtuin 5 protein-coding chr7-2599 chr7 139511412 139511622 + 11.5 0.000 Intergenic L1MB2|LINE|L1 -12168 NM_001080511 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr15-1366 chr15 78062032 78062242 + 11.5 0.000 intron (NM_144572, intron 1 of 12) Helitron3Na_Mam|RC|Helitron 15515 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr16-1802 chr16 11328503 11328713 + 11.5 0.000 Intergenic Intergenic 16604 NR_135174 105371083 Hs.737495 NR_135174 ENSG00000263080 LOC105371083 - uncharacterized LOC105371083 ncRNA chr1-5021 chr1 77595929 77596139 + 11.5 0.000 intron (NM_001308237, intron 4 of 13) L3|LINE|CR1 86624 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr9-5579 chr9 112923618 112923828 + 11.5 0.000 Intergenic L1MB4|LINE|L1 -32847 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr10-7583 chr10 18489643 18489853 + 11.5 0.000 intron (NM_201593, intron 3 of 13) intron (NM_201593, intron 3 of 13) 89173 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr6-8557 chr6 162686080 162686290 + 11.5 0.000 intron (NM_004562, intron 1 of 11) intron (NM_004562, intron 1 of 11) -40947 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr11-2358 chr11 111696666 111696876 + 11.5 0.000 intron (NM_015191, intron 4 of 14) intron (NM_015191, intron 4 of 14) 69618 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr3-8817 chr3 7711603 7711813 + 11.5 0.000 intron (NM_181874, intron 10 of 10) intron (NM_181874, intron 10 of 10) -176424 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr14-1371 chr14 20469970 20470180 + 11.5 0.000 intron (NM_000270, intron 1 of 5) intron (NM_000270, intron 1 of 5) 696 NM_000270 4860 Hs.75514 NM_000270 ENSG00000198805 PNP NP|PRO1837|PUNP purine nucleoside phosphorylase protein-coding chr13-4316 chr13 100612120 100612330 + 11.5 0.000 intron (NR_146794, intron 16 of 18) intron (NR_146794, intron 16 of 18) -23433 NM_001195087 87769 Hs.350868 NM_033110 ENSG00000134864 GGACT A2LD1 gamma-glutamylamine cyclotransferase protein-coding chr6-2087 chr6 150903239 150903449 + 11.5 0.000 intron (NM_001350486, intron 7 of 27) intron (NM_001350486, intron 7 of 27) 36858 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr2-7263 chr2 232442629 232442839 + 11.5 0.000 Intergenic Intergenic -13419 NM_001631 248 Hs.37009 NM_001631 ENSG00000163295 ALPI IAP alkaline phosphatase, intestinal protein-coding chr2-4907 chr2 147165200 147165410 + 11.5 0.000 Intergenic L1MA4|LINE|L1 578248 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr1-5298 chr1 215830317 215830527 + 11.5 0.000 intron (NM_206933, intron 47 of 71) L1ME1|LINE|L1 -242043 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr2-8582 chr2 137589754 137589964 + 11.5 0.000 intron (NM_001316349, intron 17 of 27) intron (NM_001316349, intron 17 of 27) 338073 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr12-3333 chr12 89064846 89065056 + 11.5 0.000 Intergenic L2|LINE|L2 -45259 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr17-1432 chr17 4998223 4998433 + 11.5 0.000 promoter-TSS (NM_001167985) promoter-TSS (NM_001167985) 378 NM_006612 10749 Hs.435120 NM_006612 ENSG00000129250 KIF1C LTXS1|SATX2|SAX2|SPAX2|SPG58 kinesin family member 1C protein-coding chr2-8923 chr2 183204453 183204663 + 11.5 0.000 Intergenic LTR84a|LTR|ERVL 80115 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr1-8471 chr1 115307888 115308098 + 11.5 0.000 intron (NM_002506, intron 1 of 2) intron (NM_002506, intron 1 of 2) 24959 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr6-4769 chr6 73546540 73546750 + 11.5 0.000 Intergenic Intergenic -25613 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr9-2251 chr9 83935358 83935568 + 11.5 0.000 Intergenic Intergenic -13919 NM_001271928 55582 Hs.697514 NM_017576 ENSG00000165115 KIF27 - kinesin family member 27 protein-coding chr1-9919 chr1 74589135 74589345 + 11.5 0.000 promoter-TSS (NR_121670) promoter-TSS (NR_121670) -495 NR_121670 101927320 Hs.662589 NR_121670 ENSG00000234497 ERICH3-AS1 - ERICH3 antisense RNA 1 ncRNA chr8-2432 chr8 101143803 101144013 + 11.5 0.000 Intergenic Intergenic 61765 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr5-4654 chr5 36086729 36086939 + 11.5 0.000 Intergenic Intergenic -19952 NR_031764 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr5-8322 chr5 117329257 117329467 + 11.5 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -86150 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chrX-309 chrX 48476107 48476317 + 11.5 0.000 promoter-TSS (NM_177439) promoter-TSS (NM_177439) 13 NM_177439 24140 Hs.23170 NM_012280 ENSG00000068438 FTSJ1 CDLIV|JM23|MRX44|MRX9|SPB1|TRMT7 FtsJ RNA 2'-O-methyltransferase 1 protein-coding chr2-5578 chr2 172481026 172481236 + 11.5 0.000 intron (NM_001365530, intron 11 of 25) intron (NM_001365530, intron 11 of 25) -15109 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr3-5313 chr3 127399216 127399426 + 11.5 0.000 Intergenic MER41-int|LTR|ERV1 -8651 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr3-6892 chr3 155883513 155883723 + 11.5 0.000 intron (NM_003875, intron 1 of 15) intron (NM_003875, intron 1 of 15) 12968 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr3-2880 chr3 47542647 47542857 + 11.5 0.000 Intergenic Intergenic -29040 NM_001031703 54859 Hs.311100 NM_017713 ENSG00000163832 ELP6 C3orf75|TMEM103 elongator acetyltransferase complex subunit 6 protein-coding chr1-10870 chr1 205577538 205577748 + 11.5 0.000 intron (NM_181644, intron 1 of 9) intron (NM_181644, intron 1 of 9) -8338 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr19-2686 chr19 16514711 16514921 + 11.5 0.000 intron (NM_001288834, intron 6 of 7) intron (NM_001288834, intron 6 of 7) 18422 NM_032207 84167 Hs.631627 NM_032207 ENSG00000105072 C19orf44 - chromosome 19 open reading frame 44 protein-coding chr2-3533 chr2 241209486 241209696 + 11.5 0.000 exon (NM_001370694, exon 13 of 25) exon (NM_001370694, exon 13 of 25) 20914 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr8-6893 chr8 101225466 101225676 + 11.5 0.000 Intergenic Intergenic -19507 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr7-2091 chr7 2384943 2385153 + 11.5 0.000 Intergenic Intergenic -18563 NM_001243794 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr1-10156 chr1 109530396 109530606 + 11.5 0.000 Intergenic Intergenic -9371 NM_031936 83873 Hs.709782 NM_031936 ENSG00000156097 GPR61 BALGR|GPCR3 G protein-coupled receptor 61 protein-coding chr12-4169 chr12 88985709 88985919 + 11.5 0.000 Intergenic L3|LINE|CR1 33878 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr14-3133 chr14 67940835 67941045 + 11.5 0.000 intron (NM_133509, intron 7 of 10) UCON97|DNA|DNA 117348 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr7-3668 chr7 45645437 45645647 + 11.5 0.000 intron (NM_001281768, intron 5 of 9) intron (NM_001281768, intron 5 of 9) 71174 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr4-4938 chr4 125669641 125669851 + 11.5 0.000 Intergenic Intergenic 162487 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr17-5849 chr17 67335427 67335637 + 11.5 0.000 Intergenic Intergenic 31045 NM_174871 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr8-5556 chr8 73693817 73694027 + 11.5 0.000 intron (NM_001164385, intron 1 of 9) L1MD|LINE|L1 52918 NM_001164380 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr2-9160 chr2 211917127 211917337 + 11.5 0.000 intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 509128 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr11-4969 chr11 68942663 68942873 + 11.5 0.000 Intergenic Intergenic 38218 NM_198923 116512 Hs.527802 NM_198923 ENSG00000172938 MRGPRD MRGD|TGR7 MAS related GPR family member D protein-coding chr15-1892 chr15 72376305 72376515 + 11.5 0.000 promoter-TSS (NM_001318825) promoter-TSS (NM_001318825) 297 NR_027262 80072 Hs.591113 NM_025005 ENSG00000260339 HEXA-AS1 C15orf34 HEXA antisense RNA 1 ncRNA chr9-5397 chr9 93423766 93423976 + 11.5 0.000 Intergenic LTR55|LTR|ERVL? 27737 NR_136237 158293 Hs.350364 NM_198841 ENSG00000188938 FAM120AOS C9orf10OS family with sequence similarity 120A opposite strand protein-coding chr6-1761 chr6 69893294 69893504 + 11.5 0.000 intron (NM_001858, intron 2 of 50) MER61-int|LTR|ERV1 26843 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr6-8102 chr6 126377984 126378194 + 11.5 0.000 intron (NR_104462, intron 2 of 3) intron (NR_104462, intron 2 of 3) 37974 NR_104462 387103 Hs.486401 NM_001012507 ENSG00000203760 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding chr10-8386 chr10 81963624 81963834 + 11.5 0.000 intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 86042 NR_163253 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr5-3173 chr5 73417720 73417930 + 11.5 0.000 Intergenic Intergenic 30952 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr17-1784 chr17 64682239 64682449 + 11.5 0.000 Intergenic LTR79|LTR|ERVL -20037 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr4-4875 chr4 115113461 115113671 + 11.5 0.000 promoter-TSS (NM_022569) promoter-TSS (NM_022569) 54 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chrX-461 chrX 151082483 151082693 + 11.5 0.000 Intergenic CpG -85634 NR_036256 100422930 NR_036256 ENSG00000265789 MIR4330 - microRNA 4330 ncRNA chr1-9635 chr1 46562975 46563185 + 11.5 0.000 intron (NM_198973, intron 9 of 11) intron (NM_198973, intron 9 of 11) -11423 NM_001322255 148930 Hs.350764 NM_182516 ENSG00000162456 KNCN Kino|L5 kinocilin protein-coding chr12-5062 chr12 90675276 90675486 + 11.5 0.000 Intergenic Intergenic -242642 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr10-1602 chr10 44715240 44715450 + 11.5 0.000 Intergenic Intergenic -195971 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr6-1399 chr6 121319305 121319515 + 11.5 0.000 intron (NR_104452, intron 2 of 35) intron (NR_104452, intron 2 of 35) 15070 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr10-1100 chr10 73876948 73877158 + 11.5 0.000 Intergenic Intergenic -2462 NM_001320898 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr19-3896 chr19 39737539 39737749 + 11.5 0.000 intron (NM_001828, intron 1 of 3) intron (NM_001828, intron 1 of 3) 385 NM_001828 1178 Hs.889 NM_001828 ENSG00000105205 CLC GAL10|Gal-10|LGALS10|LGALS10A|LPPL_HUMAN Charcot-Leyden crystal galectin protein-coding chr9-4251 chr9 92931276 92931486 + 11.5 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -16142 NM_001083536 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr2-4789 chr2 37855935 37856145 + 11.5 0.000 intron (NR_110012, intron 2 of 3) intron (NR_110012, intron 2 of 3) 19823 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr2-12100 chr2 33884059 33884269 + 11.5 0.000 intron (NR_126403, intron 2 of 5) LTR32|LTR|ERVL -155947 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr6-5363 chr6 150278461 150278671 + 11.5 0.000 Intergenic MER58D|DNA|hAT-Charlie -90446 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr1-11378 chr1 44082193 44082403 + 11.5 0.000 Intergenic Intergenic -36523 NM_173484 128209 Hs.567674 NM_173484 ENSG00000171872 KLF17 ZNF393|Zfp393 Kruppel like factor 17 protein-coding chr1-9459 chr1 35475419 35475629 + 11.5 0.000 intron (NM_024874, intron 4 of 20) AluJr|SINE|Alu 81879 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr1-5861 chr1 1571352 1571562 + 11.5 0.000 intron (NM_014188, intron 1 of 4) intron (NM_014188, intron 1 of 4) 3406 NM_014188 29101 Hs.30026 NM_014188 ENSG00000160075 SSU72 HSPC182|PNAS-120 SSU72 homolog, RNA polymerase II CTD phosphatase protein-coding chr2-3757 chr2 7402699 7402909 + 11.5 0.000 Intergenic (AGACAG)n|Simple_repeat|Simple_repeat -18457 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr10-4832 chr10 12922012 12922222 + 11.5 0.000 intron (NM_001282658, intron 6 of 6) intron (NM_001282658, intron 6 of 6) 79596 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr8-2769 chr8 117184016 117184226 + 11.5 0.000 Intergenic Intergenic 49126 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chrX-2765 chrX 130171011 130171221 + 11.5 0.000 promoter-TSS (NM_004794) promoter-TSS (NM_004794) -846 NM_004794 9363 Hs.654356 NM_004794 ENSG00000134594 RAB33A RabS10 RAB33A, member RAS oncogene family protein-coding chr17-8157 chr17 60332678 60332888 + 11.5 0.000 intron (NM_032582, intron 2 of 33) L1ME1|LINE|L1 59350 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr6-3338 chr6 15351749 15351959 + 11.5 0.000 intron (NM_001267040, intron 1 of 17) intron (NM_001267040, intron 1 of 17) 102999 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr3-2275 chr3 63960385 63960595 + 11.5 0.000 intron (NM_001177387, intron 4 of 12) L2a|LINE|L2 -7304 NM_001128149 6314 Hs.476595 NM_000333 ENSG00000163635 ATXN7 ADCAII|OPCA3|SCA7|SGF73 ataxin 7 protein-coding chr10-3571 chr10 80185319 80185529 + 11.5 0.000 intron (NM_001278408, intron 1 of 16) intron (NM_001278408, intron 1 of 16) 19067 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr21-949 chr21 43030001 43030211 + 11.5 0.000 3' UTR (NM_001320694, exon 11 of 11) 3' UTR (NM_001320694, exon 11 of 11) 38298 NM_001321072 875 Hs.533013 NM_000071 ENSG00000160200 CBS CBSL|HIP4 cystathionine-beta-synthase protein-coding chr18-590 chr18 44518266 44518476 + 11.5 0.000 intron (NR_110792, intron 1 of 4) intron (NR_110792, intron 1 of 4) 13326 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr4-2894 chr4 80037046 80037256 + 11.5 0.000 intron (NM_001286781, intron 7 of 16) intron (NM_001286781, intron 7 of 16) 36078 NM_058172 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF ANTXR cell adhesion molecule 2 protein-coding chr17-3617 chr17 1882868 1883078 + 11.5 0.000 intron (NM_001355120, intron 12 of 16) intron (NM_001355120, intron 12 of 16) 52968 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr3-2497 chr3 171654957 171655167 + 11.5 0.000 intron (NM_002662, intron 21 of 26) intron (NM_002662, intron 21 of 26) 155421 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr16-4618 chr16 70429077 70429287 + 11.5 0.000 intron (NM_006927, intron 1 of 6) intron (NM_006927, intron 1 of 6) 9918 NM_006927 6483 Hs.368611 NM_006927 ENSG00000157350 ST3GAL2 Gal-NAc6S|SIAT4B|ST3GALII|ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding chr5-4095 chr5 67517017 67517227 + 11.5 0.000 Intergenic L2c|LINE|L2 129667 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr17-3559 chr17 78375790 78376000 + 11.5 0.000 Intergenic Intergenic -2754 NR_111989 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr11-3108 chr11 33266389 33266599 + 11.5 0.000 intron (NM_001278162, intron 1 of 15) AluJb|SINE|Alu 8163 NM_001278162 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr1-5004 chr1 65060000 65060210 + 11.5 0.000 intron (NM_001321853, intron 2 of 26) intron (NM_001321853, intron 2 of 26) -1597 NR_029516 406893 NR_029516 ENSG00000199135 MIR101-1 MIRN101-1|mir-101-1 microRNA 101-1 ncRNA chr11-3539 chr11 14818677 14818887 + 11.5 0.000 intron (NM_000922, intron 6 of 15) intron (NM_000922, intron 6 of 15) 73423 NM_024514 120227 Hs.371427 NM_024514 ENSG00000186104 CYP2R1 - cytochrome P450 family 2 subfamily R member 1 protein-coding chr12-7297 chr12 53696333 53696543 + 11.5 0.000 Intergenic Intergenic -20108 NM_001002031 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr14-1233 chr14 100311260 100311470 + 11.5 0.000 Intergenic AluJb|SINE|Alu 3506 NR_029906 442910 NR_029906 ENSG00000198984 MIR345 MIRN345|hsa-mir-345|mir-345 microRNA 345 ncRNA chr8-2573 chr8 41875495 41875705 + 11.5 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 21141 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr6-2473 chr6 42978522 42978732 + 11.5 0.000 non-coding (NR_133009, exon 1 of 15) non-coding (NR_133009, exon 1 of 15) 554 NM_000287 5190 Hs.656425 NM_000287 ENSG00000124587 PEX6 HMLR2|PAF-2|PAF2|PBD4A|PDB4B|PXAAA1 peroxisomal biogenesis factor 6 protein-coding chr2-4986 chr2 205697207 205697417 + 11.5 0.000 intron (NM_018534, intron 1 of 15) intron (NM_018534, intron 1 of 15) 14811 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr5-1168 chr5 10353501 10353711 + 11.5 0.000 promoter-TSS (NM_001270661) promoter-TSS (NM_001270661) -89 NM_001270661 10299 Hs.432862 NM_005885 ENSG00000145495 MARCH6 DOA10|MARCH-VI|RNF176|TEB4 membrane associated ring-CH-type finger 6 protein-coding chr1-7307 chr1 246078234 246078444 + 11.5 0.000 intron (NM_022743, intron 5 of 11) LTR54|LTR|ERV1 339073 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr10-1765 chr10 35822431 35822641 + 11.5 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 44234 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr2-3465 chr2 152410512 152410722 + 11.5 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 75443 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr9-1660 chr9 27529675 27529885 + 11.5 0.000 promoter-TSS (NM_024761) promoter-TSS (NM_024761) 34 NM_024761 79817 Hs.369022 NM_024761 ENSG00000120162 MOB3B C9orf35|MOB1D|MOBKL2B MOB kinase activator 3B protein-coding chr4-2099 chr4 47612620 47612830 + 11.5 0.000 intron (NM_006587, intron 19 of 21) L3|LINE|CR1 -39944 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA chr12-3207 chr12 54698038 54698248 + 11.5 0.000 Intergenic L2b|LINE|L2 -49778 NM_053283 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr9-1547 chr9 136275110 136275320 + 11.5 0.000 Intergenic Intergenic 28879 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr3-3791 chr3 13830499 13830709 + 11.5 0.000 intron (NM_004625, intron 3 of 3) intron (NM_004625, intron 3 of 3) 49467 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding chr9-2496 chr9 94874493 94874703 + 11.5 0.000 intron (NM_032823, intron 5 of 14) (TTCTT)n|Simple_repeat|Simple_repeat 64636 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr11-5474 chr11 75925559 75925769 + 11.5 0.000 intron (NM_003369, intron 6 of 14) intron (NM_003369, intron 6 of 14) 110454 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr12-4369 chr12 4098668 4098878 + 11.5 0.000 Intergenic Intergenic -174989 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chrX-662 chrX 132092578 132092788 + 11.5 0.000 intron (NM_194277, intron 5 of 11) intron (NM_194277, intron 5 of 11) 35337 NM_001306193 90167 Hs.170776 NM_194277 ENSG00000165694 FRMD7 NYS|NYS1|XIPAN FERM domain containing 7 protein-coding chr15-2922 chr15 45362827 45363037 + 11.5 0.000 intron (NM_001482, intron 8 of 8) intron (NM_001482, intron 8 of 8) 15612 NM_001482 2628 Hs.75335 NM_001482 ENSG00000171766 GATM AGAT|AT|CCDS3 glycine amidinotransferase protein-coding chr3-2721 chr3 88376405 88376615 + 11.5 0.000 intron (NM_001368167, intron 2 of 2) intron (NM_001368167, intron 2 of 2) 38054 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr7-5619 chr7 52892160 52892370 + 11.5 0.000 Intergenic Intergenic -143368 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr17-2950 chr17 60384124 60384334 + 11.5 0.000 intron (NM_032582, intron 1 of 33) intron (NM_032582, intron 1 of 33) 7904 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr10-1968 chr10 30785422 30785632 + 11.5 0.000 Intergenic Intergenic 62308 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr2-3738 chr2 241367137 241367347 + 11.5 0.000 intron (NM_014808, intron 1 of 26) intron (NM_014808, intron 1 of 26) 10957 NM_001282983 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr7-5313 chr7 25856460 25856670 + 11.5 0.000 Intergenic Intergenic -66446 NR_157808 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr1-5070 chr1 101303117 101303327 + 11.5 0.000 Intergenic Intergenic -20615 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr2-7007 chr2 144660976 144661186 + 11.5 0.000 Intergenic MIR3|SINE|MIR -6886 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr1-2787 chr1 207866797 207867007 + 11.5 0.000 Intergenic Intergenic -44199 NR_135299 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chr3-7077 chr3 177544030 177544240 + 11.5 0.000 intron (NR_047568, intron 2 of 3) L1ME1|LINE|L1 102214 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr4-3089 chr4 151369341 151369551 + 11.5 0.000 Intergenic Intergenic -39730 NM_001348694 729830 Hs.633810 NM_001109977 ENSG00000164142 FAM160A1 - family with sequence similarity 160 member A1 protein-coding chr1-1426 chr1 39883321 39883531 + 11.5 0.000 promoter-TSS (NM_001312691) promoter-TSS (NM_001312691) 78 NM_017646 54802 Hs.356554 NM_017646 ENSG00000043514 TRIT1 COXPD35|GRO1|IPPT|IPT|IPTase|MOD5|hGRO1 tRNA isopentenyltransferase 1 protein-coding chr1-9283 chr1 25666495 25666705 + 11.5 0.000 intron (NM_020379, intron 1 of 11) intron (NM_020379, intron 1 of 11) 49132 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr1-4441 chr1 246838065 246838275 + 11.5 0.000 TTS (NM_001323342) TTS (NM_001323342) 48553 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr22-1496 chr22 37350438 37350648 + 11.5 0.000 intron (NR_110512, intron 1 of 2) intron (NR_110512, intron 1 of 2) 4296 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr4-2317 chr4 105710646 105710856 + 11.5 0.000 promoter-TSS (NM_001031720) promoter-TSS (NM_001031720) -62 NM_001031720 79807 Hs.161429 NM_024751 ENSG00000138780 GSTCD - glutathione S-transferase C-terminal domain containing protein-coding chr5-1596 chr5 17238765 17238975 + 11.5 0.000 intron (NM_006317, intron 1 of 1) intron (NM_006317, intron 1 of 1) 21239 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr15-4453 chr15 47266585 47266795 + 11.5 0.000 intron (NM_001198999, intron 1 of 19) L1M4b|LINE|L1 82601 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr20-848 chr20 38809879 38810089 + 11.5 0.000 intron (NM_015568, intron 1 of 10) AluJb|SINE|Alu 4287 NM_001172735 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr2-2751 chr2 186544039 186544249 + 11.5 0.000 Intergenic Intergenic -45912 NM_001145000 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr5-1060 chr5 140322903 140323113 + 11.5 0.000 Intergenic Intergenic -19907 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr1-4111 chr1 241817267 241817477 + 11.5 0.000 Intergenic Intergenic -30819 NM_001319224 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr5-5124 chr5 103028652 103028862 + 11.5 0.000 intron (NM_001364590, intron 25 of 25) intron (NM_001364590, intron 25 of 25) 91381 NM_001317954 54826 Hs.24088 NM_017676 ENSG00000145723 GIN1 GIN-1|TGIN1|ZH2C2 gypsy retrotransposon integrase 1 protein-coding chr20-1990 chr20 47359191 47359401 + 11.5 0.000 Intergenic Intergenic -2407 NM_001281772 23613 Hs.446240 NM_012408 ENSG00000101040 ZMYND8 PRKCBP1|PRO2893|RACK7 zinc finger MYND-type containing 8 protein-coding chr19-1886 chr19 42452755 42452965 + 11.5 0.000 intron (NR_073179, intron 1 of 1) intron (NR_073179, intron 1 of 1) -9914 NM_198477 284340 Hs.445586 NM_198477 ENSG00000189377 CXCL17 DMC|Dcip1|UNQ473|VCC-1|VCC1 C-X-C motif chemokine ligand 17 protein-coding chr13-2774 chr13 99610671 99610881 + 11.5 0.000 intron (NR_104592, intron 1 of 9) L1M4|LINE|L1 4086 NR_104592 171425 Hs.655642 NM_206808 ENSG00000125246 CLYBL CLB citrate lyase beta like protein-coding chr9-1373 chr9 35658430 35658640 + 11.5 0.000 promoter-TSS (NR_003051) promoter-TSS (NR_003051) 243 NM_001195201 203260 Hs.745107 NM_174923 ENSG00000159884 CCDC107 PSEC0222 coiled-coil domain containing 107 protein-coding chr3-4921 chr3 195024207 195024417 + 11.5 0.000 Intergenic L1MA8|LINE|L1 -70276 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr11-4548 chr11 121767246 121767456 + 11.5 0.000 Intergenic MLT2C1|LTR|ERVL 315037 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr4-2395 chr4 62245268 62245478 + 11.5 0.000 Intergenic Intergenic -83608 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr3-4959 chr3 11092145 11092355 + 11.5 0.000 Intergenic MER52D|LTR|ERV1 -44988 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr3-1780 chr3 12830353 12830563 + 11.5 0.000 intron (NM_001162499, intron 13 of 14) intron (NM_001162499, intron 13 of 14) 9992 NM_001007074 6161 Hs.265174 NM_000994 ENSG00000144713 RPL32 L32|PP9932 ribosomal protein L32 protein-coding chrX-409 chrX 101219832 101220042 + 11.5 0.000 promoter-TSS (NM_001171184) promoter-TSS (NM_001171184) -7 NM_001939 1821 Hs.159291 NM_001939 ENSG00000102385 DRP2 DRP-2 dystrophin related protein 2 protein-coding chr11-6904 chr11 106882175 106882385 + 11.5 0.000 intron (NM_001256424, intron 4 of 8) intron (NM_001256424, intron 4 of 8) 136196 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr2-7064 chr2 166015942 166016152 + 11.5 0.000 intron (NR_110598, intron 2 of 3) G-rich|Low_complexity|Low_complexity 58629 NR_110598 102724058 Hs.570269 NR_110598 ENSG00000236107 LOC102724058 - uncharacterized LOC102724058 ncRNA chr10-2979 chr10 73653856 73654066 + 11.5 0.000 intron (NM_001114133, intron 2 of 3) intron (NM_001114133, intron 2 of 3) 2068 NM_001114133 79933 Hs.645273 NM_024875 ENSG00000166317 SYNPO2L - synaptopodin 2 like protein-coding chr4-7692 chr4 88163221 88163431 + 11.5 0.000 intron (NM_001257386, intron 1 of 15) L2|LINE|L2 -4003 NM_001348989 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr22-2771 chr22 41281039 41281249 + 11.5 0.000 intron (NM_001317930, intron 1 of 15) intron (NM_001317930, intron 1 of 15) 5043 NM_002883 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr16-2426 chr16 76776655 76776865 + 11.5 0.000 Intergenic L2b|LINE|L2 -92176 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr2-7685 chr2 30608704 30608914 + 11.5 0.000 intron (NM_182551, intron 6 of 6) Tigger3b|DNA|TcMar-Tigger 161563 NM_001304445 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr8-1479 chr8 30636097 30636307 + 11.5 0.000 intron (NM_001348353, intron 2 of 6) MamSINE1|SINE|tRNA-RTE -2378 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr6-2620 chr6 137195320 137195530 + 11.5 0.000 Intergenic AluJb|SINE|Alu -21781 NM_052962 116379 Hs.126891 NM_052962 ENSG00000164485 IL22RA2 CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16 interleukin 22 receptor subunit alpha 2 protein-coding chr1-4137 chr1 2400925 2401135 + 11.5 0.000 intron (NM_007033, intron 5 of 6) intron (NM_007033, intron 5 of 6) 9189 NM_007033 11079 Hs.525527 NM_007033 ENSG00000157916 RER1 - retention in endoplasmic reticulum sorting receptor 1 protein-coding chr4-2907 chr4 83334833 83335043 + 11.5 0.000 promoter-TSS (NM_001199830) promoter-TSS (NM_001199830) -90 NM_001098540 10855 Hs.44227 NM_006665 ENSG00000173083 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding chrX-1322 chrX 132071324 132071534 + 11.5 0.000 intron (NM_001042453, intron 7 of 10) intron (NM_001042453, intron 7 of 10) 47840 NM_001042452 51765 Hs.444247 NM_016542 ENSG00000134602 STK26 MASK|MST4 serine/threonine kinase 26 protein-coding chr10-3540 chr10 75244719 75244929 + 11.5 0.000 Intergenic Intergenic -8867 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr14-2639 chr14 67518305 67518515 + 11.5 0.000 intron (NM_001348546, intron 1 of 2) MIRb|SINE|MIR -2925 NM_001348548 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr2-3028 chr2 66509633 66509843 + 11.5 0.000 intron (NM_002398, intron 7 of 12) intron (NM_002398, intron 7 of 12) -64292 NR_110156 100507073 Hs.667940 NR_110156 ENSG00000232046 LINC01798 - long intergenic non-protein coding RNA 1798 ncRNA chr12-3339 chr12 90043301 90043511 + 11.5 0.000 Intergenic Intergenic 95713 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA chr15-2777 chr15 33675112 33675322 + 11.5 0.000 intron (NM_001243996, intron 38 of 102) MIRb|SINE|MIR -293280 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr12-1773 chr12 93419428 93419638 + 11.5 0.000 intron (NM_003348, intron 1 of 3) intron (NM_003348, intron 1 of 3) 22414 NM_003348 7334 Hs.524630 NM_003348 ENSG00000177889 UBE2N HEL-S-71|UBC13|UBCHBEN; UBC13|UbcH-ben|UbcH13 ubiquitin conjugating enzyme E2 N protein-coding chr6-3992 chr6 114297146 114297356 + 11.5 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -234374 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr6-3789 chr6 23897348 23897558 + 11.5 0.000 Intergenic L1MC3|LINE|L1 -228762 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr14-2321 chr14 95632234 95632444 + 11.5 0.000 Intergenic LTR16A|LTR|ERVL -19758 NR_152604 27004 Hs.510368 NM_012468 TCL6 TNG1|TNG2 T cell leukemia/lymphoma 6 ncRNA chr2-5586 chr2 175052817 175053027 + 11.5 0.000 Intergenic Intergenic -47543 NR_038133 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr6-7842 chr6 104624308 104624518 + 11.5 0.000 Intergenic Intergenic 235133 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr1-11115 chr1 231020720 231020930 + 11.5 0.000 promoter-TSS (NR_031593) promoter-TSS (NR_031593) -901 NR_031593 100302132 NR_031593 ENSG00000283799 MIR1182 MIRN1182|hsa-mir-1182 microRNA 1182 ncRNA chr3-6929 chr3 158769222 158769432 + 11.5 0.000 Intergenic Intergenic -32727 NM_001167903 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr1-8563 chr1 170369260 170369470 + 11.5 0.000 Intergenic Intergenic -85157 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr1-5281 chr1 209367386 209367596 + 11.5 0.000 Intergenic Intergenic -4564 NR_146491 101929476 Hs.568721 NR_146491 LINC01698 - long intergenic non-protein coding RNA 1698 ncRNA chr5-3439 chr5 156890351 156890561 + 11.5 0.000 Intergenic Intergenic 40161 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr12-2579 chr12 115267829 115268039 + 11.5 0.000 Intergenic Intergenic -583759 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr5-7366 chr5 19496081 19496291 + 11.5 0.000 intron (NM_001349559, intron 11 of 12) L1MEg1|LINE|L1 390086 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr15-816 chr15 82045414 82045624 + 11.5 0.000 exon (NM_032246, exon 1 of 2) exon (NM_032246, exon 1 of 2) 499 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr7-3968 chr7 134462132 134462342 + 11.5 0.000 Intergenic Intergenic -2998 NM_001346142 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr19-5679 chr19 10293744 10293954 + 11.5 0.000 exon (NM_003259, exon 7 of 11) exon (NM_003259, exon 7 of 11) 3897 NM_003259 7087 Hs.465862 NM_003259 ENSG00000105376 ICAM5 TLCN|TLN intercellular adhesion molecule 5 protein-coding chr1-9972 chr1 80986602 80986812 + 11.5 0.000 Intergenic Intergenic -319485 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr4-540 chr4 71186534 71186744 + 11.5 0.000 promoter-TSS (NM_001134742) promoter-TSS (NM_001134742) -620 NM_001098484 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr1-13268 chr1 226602959 226603169 + 11.5 0.000 3' UTR (NM_001003665, exon 4 of 4) 3' UTR (NM_001003665, exon 4 of 4) 54300 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr1-4933 chr1 45892157 45892367 + 11.5 0.000 intron (NM_001324320, intron 4 of 29) MER92-int|LTR|ERV1 27914 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr19-668 chr19 47608618 47608828 + 11.5 0.000 intron (NM_015711, intron 1 of 14) CpG 527 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr14-4693 chr14 57442335 57442545 + 11.5 0.000 Intergenic Intergenic 51417 NM_001283060 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chrX-2257 chrX 47537521 47537731 + 11.5 0.000 Intergenic MIR|SINE|MIR -23474 NM_001256197 369 Hs.446641 NM_001654 ENSG00000078061 ARAF A-RAF|ARAF1|PKS2|RAFA1 A-Raf proto-oncogene, serine/threonine kinase protein-coding chr10-1271 chr10 3888126 3888336 + 11.5 0.000 Intergenic Intergenic 54281 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr14-3274 chr14 79705733 79705943 + 11.5 0.000 intron (NR_073547, intron 18 of 20) L2a|LINE|L2 426458 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr1-6067 chr1 94476366 94476576 + 11.5 0.000 intron (NM_002858, intron 7 of 22) intron (NM_002858, intron 7 of 22) 58082 NM_002858 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr3-5767 chr3 22983292 22983502 + 11.5 0.000 Intergenic Intergenic 219181 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr16-792 chr16 68085017 68085227 + 11.5 0.000 promoter-TSS (NM_173165) promoter-TSS (NM_173165) -248 NM_004555 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr1-11244 chr1 248135923 248136133 + 11.5 0.000 Intergenic L1M1|LINE|L1 -9120 NM_001004690 127059 Hs.553580 NM_001004690 ENSG00000162727 OR2M5 OR2M5P olfactory receptor family 2 subfamily M member 5 protein-coding chr2-4275 chr2 231212172 231212382 + 11.5 0.000 intron (NM_001352757, intron 3 of 19) intron (NM_001352757, intron 3 of 19) 13646 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr3-5141 chr3 53772948 53773158 + 11.5 0.000 intron (NM_001128840, intron 33 of 47) intron (NM_001128840, intron 33 of 47) 73366 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr16-1189 chr16 2170155 2170365 + 11.5 0.000 intron (NM_032271, intron 4 of 20) intron (NM_032271, intron 4 of 20) 14478 NM_032271 84231 Hs.713632 NM_032271 ENSG00000131653 TRAF7 CAFDADD|RFWD1|RNF119 TNF receptor associated factor 7 protein-coding chr7-1765 chr7 55095059 55095269 + 11.5 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -14675 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr4-2254 chr4 165240870 165241080 + 11.5 0.000 intron (NM_001161522, intron 3 of 13) intron (NM_001161522, intron 3 of 13) 30956 NM_001161522 11275 Hs.388668 NM_007246 ENSG00000109466 KLHL2 ABP-KELCH|MAV|MAYVEN kelch like family member 2 protein-coding chr10-4588 chr10 110924228 110924438 + 11.5 0.000 intron (NR_136749, intron 1 of 7) L2c|LINE|L2 4790 NM_001324337 8036 Hs.104315 NM_007373 ENSG00000108061 SHOC2 SIAA0862|SOC2|SUR8 SHOC2 leucine rich repeat scaffold protein protein-coding chr20-2629 chr20 42340310 42340520 + 11.5 0.000 intron (NM_133170, intron 11 of 31) intron (NM_133170, intron 11 of 31) -345068 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr1-6082 chr1 108661405 108661615 + 11.5 0.000 promoter-TSS (NM_144584) promoter-TSS (NM_144584) 16 NM_144584 113802 Hs.7962 NM_144584 ENSG00000162639 HENMT1 C1orf59|HEN1 HEN methyltransferase 1 protein-coding chr13-1662 chr13 73466993 73467203 + 11.5 0.000 Intergenic MER91A|DNA|hAT-Tip100 -97146 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr17-2970 chr17 65213757 65213967 + 11.5 0.000 intron (NM_003835, intron 17 of 18) intron (NM_003835, intron 17 of 18) 76492 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr1-8588 chr1 180206709 180206919 + 11.5 0.000 Intergenic L2c|LINE|L2 -23450 NM_033343 89884 Hs.658487 NM_033343 ENSG00000121454 LHX4 CPHD4 LIM homeobox 4 protein-coding chr7-3100 chr7 18895673 18895883 + 11.5 0.000 intron (NM_058176, intron 21 of 22) intron (NM_058176, intron 21 of 22) 221858 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr17-5427 chr17 35272671 35272881 + 11.5 0.000 3' UTR (NM_001330183, exon 4 of 4) 3' UTR (NM_001330183, exon 4 of 4) 29704 NM_144975 162394 Hs.585792 NM_144975 ENSG00000166750 SLFN5 - schlafen family member 5 protein-coding chr4-5737 chr4 54213363 54213573 + 11.5 0.000 Intergenic Intergenic -15825 NM_001347828 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chr2-7541 chr2 22750552 22750762 + 11.5 0.000 Intergenic L2c|LINE|L2 214178 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr2-1741 chr2 23351521 23351731 + 11.5 0.000 Intergenic Intergenic -33553 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr10-911 chr10 70132573 70132783 + 11.5 0.000 intron (NM_001198696, intron 1 of 8) CpG 147 NM_032797 84883 Hs.650680 NM_032797 ENSG00000042286 AIFM2 AMID|PRG3 apoptosis inducing factor mitochondria associated 2 protein-coding chr17-3968 chr17 64303350 64303560 + 11.5 0.000 Intergenic Intergenic -40195 NM_018469 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr8-2655 chr8 74297238 74297448 + 11.5 0.000 intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 24018 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr15-609 chr15 70097604 70097814 + 11.5 0.000 promoter-TSS (NM_001282981) promoter-TSS (NM_001282981) 208 NM_001282979 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr12-2455 chr12 54721713 54721923 + 11.5 0.000 Intergenic Intergenic -73453 NM_053283 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr11-6977 chr11 116160636 116160846 + 11.5 0.000 Intergenic L2a|LINE|L2 -400541 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr2-5135 chr2 25378750 25378960 + 11.5 0.000 intron (NM_033147, intron 19 of 19) intron (NM_033147, intron 19 of 19) -36265 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr1-3338 chr1 31422703 31422913 + 11.5 0.000 intron (NM_001199039, intron 2 of 10) intron (NM_001199039, intron 2 of 10) 8995 NM_018565 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr3-2956 chr3 64150782 64150992 + 11.5 0.000 intron (NM_001370528, intron 6 of 7) intron (NM_001370528, intron 6 of 7) -36657 NR_046702 100874243 Hs.670840 NR_046702 ENSG00000226017 PRICKLE2-AS3 - PRICKLE2 antisense RNA 3 ncRNA chr9-2296 chr9 133973994 133974204 + 11.5 0.000 intron (NM_001134398, intron 1 of 29) L2c|LINE|L2 18225 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr4-5670 chr4 18092718 18092928 + 11.5 0.000 Intergenic L1PA5|LINE|L1 -70948 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr8-4623 chr8 132474475 132474685 + 11.5 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 6515 NM_004519 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr11-6623 chr11 74006561 74006771 + 11.5 0.000 intron (NM_003356, intron 2 of 6) intron (NM_003356, intron 2 of 6) 2419 NM_003356 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr10-9063 chr10 124850462 124850672 + 11.5 0.000 Intergenic AluSc8|SINE|Alu 48748 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr2-7140 chr2 194644889 194645099 + 11.5 0.000 Intergenic L1M2|LINE|L1 -85601 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr13-1160 chr13 34678208 34678418 + 11.5 0.000 Intergenic MER44B|DNA|TcMar-Tigger -37628 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr1-5295 chr1 214658952 214659162 + 11.5 0.000 intron (NM_016343, intron 19 of 19) intron (NM_016343, intron 19 of 19) 55862 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr10-3881 chr10 48309775 48309985 + 11.5 0.000 intron (NM_001323327, intron 2 of 12) intron (NM_001323327, intron 2 of 12) 3203 NM_001323331 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr13-1217 chr13 74886570 74886780 + 11.5 0.000 Intergenic Intergenic 333832 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr4-8293 chr4 143002324 143002534 + 11.5 0.000 Intergenic Intergenic -155894 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr16-1436 chr16 59543784 59543994 + 11.5 0.000 Intergenic Intergenic 211302 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr2-3950 chr2 64837292 64837502 + 11.5 0.000 Intergenic Intergenic 26234 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr5-2423 chr5 117888799 117889009 + 11.5 0.000 intron (NR_104997, intron 1 of 2) intron (NR_104997, intron 1 of 2) 158543 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr19-2415 chr19 35170307 35170517 + 11.5 0.000 TTS (NM_001320912) TTS (NM_001320912) 15677 NM_001320913 53827 Hs.333418 NM_014164 ENSG00000089327 FXYD5 DYSAD|HSPC113|IWU1|KCT1|OIT2|PRO6241|RIC FXYD domain containing ion transport regulator 5 protein-coding chr1-5720 chr1 74652663 74652873 + 11.5 0.000 intron (NM_001002912, intron 1 of 14) intron (NM_001002912, intron 1 of 14) 21024 NM_001002912 127254 Hs.531182 NM_001002912 ENSG00000178965 ERICH3 C1orf173 glutamate rich 3 protein-coding chrX-2545 chrX 99908402 99908612 + 11.5 0.000 Intergenic Intergenic 501766 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr1-11220 chr1 245132865 245133075 + 11.5 0.000 Intergenic Intergenic -22015 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr9-5541 chr9 109244434 109244644 + 11.5 0.000 intron (NM_019114, intron 14 of 25) AluSx|SINE|Alu 76425 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr8-2422 chr8 96852153 96852363 + 11.5 0.000 intron (NM_016134, intron 3 of 7) intron (NM_016134, intron 3 of 7) 207016 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr15-3451 chr15 92174112 92174322 + 11.5 0.000 Intergenic Intergenic -219664 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr7-5208 chr7 12248493 12248703 + 11.5 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 37304 NM_018374 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr10-3668 chr10 101752797 101753007 + 11.5 0.000 Intergenic Intergenic 23212 NM_033163 2253 Hs.57710 NM_006119 ENSG00000107831 FGF8 AIGF|FGF-8|HBGF-8|HH6|KAL6 fibroblast growth factor 8 protein-coding chr10-3648 chr10 99451033 99451243 + 11.5 0.000 Intergenic Intergenic -20514 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr12-4334 chr12 720331 720541 + 11.5 0.000 Intergenic L2c|LINE|L2 -32143 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr3-5911 chr3 41087622 41087832 + 11.5 0.000 Intergenic MIR3|SINE|MIR -111778 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr2-3350 chr2 220120386 220120596 + 11.5 0.000 Intergenic Intergenic -213926 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr2-9188 chr2 216029847 216030057 + 11.5 0.000 Intergenic Intergenic -16401 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr6-4116 chr6 154892308 154892518 + 11.5 0.000 Intergenic Intergenic 39053 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C - microRNA 1273c ncRNA chr12-5190 chr12 104728000 104728210 + 11.5 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 136472 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr2-6565 chr2 220552923 220553133 + 11.5 0.000 Intergenic Intergenic -646463 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr2-9159 chr2 211907422 211907632 + 11.5 0.000 intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 518833 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr8-1232 chr8 119684333 119684543 + 11.5 0.000 Intergenic Intergenic -11048 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr6-4398 chr6 25959954 25960164 + 11.5 0.000 Intergenic L2a|LINE|L2 -2743 NM_006355 10475 Hs.584851 NM_006355 ENSG00000112343 TRIM38 RNF15|RORET tripartite motif containing 38 protein-coding chr1-7095 chr1 195592011 195592221 + 11.5 0.000 Intergenic Intergenic 496599 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr21-1629 chr21 21294940 21295150 + 11.5 0.000 intron (NM_001352592, intron 6 of 18) intron (NM_001352592, intron 6 of 18) 147883 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr2-3021 chr2 61895326 61895536 + 11.5 0.000 intron (NM_001321781, intron 1 of 2) L1M3a|LINE|L1 6708 NM_001321781 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr6-4920 chr6 97820567 97820777 + 11.5 0.000 Intergenic Intergenic -203859 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr12-4743 chr12 51959543 51959753 + 11.5 0.000 intron (NM_020327, intron 1 of 8) intron (NM_020327, intron 1 of 8) 6268 NM_020327 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr1-3057 chr1 12480836 12481046 + 11.5 0.000 intron (NM_015378, intron 67 of 69) intron (NM_015378, intron 67 of 69) -26305 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr2-13337 chr2 133675227 133675437 + 11.5 0.000 Intergenic Intergenic -106869 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr2-6003 chr2 76834185 76834395 + 11.5 0.000 intron (NR_146416, intron 1 of 1) AluSx1|SINE|Alu -151675 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr12-3464 chr12 119802630 119802840 + 11.5 0.000 intron (NM_007174, intron 10 of 46) intron (NM_007174, intron 10 of 46) 74585 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr3-2125 chr3 70824869 70825079 + 11.5 0.000 Intergenic Intergenic 239950 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr6-5230 chr6 135425842 135426052 + 11.5 0.000 intron (NM_017651, intron 19 of 27) intron (NM_017651, intron 19 of 27) 71793 NM_001134831 54806 Hs.386684 NM_017651 ENSG00000135541 AHI1 AHI-1|JBTS3|ORF1|dJ71N10.1 Abelson helper integration site 1 protein-coding chr6-2972 chr6 38661534 38661744 + 11.5 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -21710 NM_001099272 114781 Hs.603858 NM_052893 ENSG00000183826 BTBD9 dJ322I12.1 BTB domain containing 9 protein-coding chr15-1646 chr15 95922530 95922740 + 11.5 0.000 Intergenic Intergenic 205206 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr9-1640 chr9 136531382 136531592 + 11.5 0.000 intron (NM_017617, intron 2 of 33) intron (NM_017617, intron 2 of 33) -11861 NR_039820 100616242 NR_039820 ENSG00000263403 MIR4673 - microRNA 4673 ncRNA chrX-996 chrX 21098156 21098366 + 11.5 0.000 Intergenic L1PA13|LINE|L1 -276157 NM_001330770 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr1-7099 chr1 197467867 197468077 + 11.5 0.000 intron (NR_047564, intron 11 of 11) intron (NR_047564, intron 11 of 11) 199720 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr19-3399 chr19 15355104 15355314 + 11.5 0.000 exon (NM_005858, exon 14 of 14) exon (NM_005858, exon 14 of 14) -22670 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr20-2020 chr20 62431693 62431903 + 11.5 0.000 Intergenic AluSq|SINE|Alu -4259 NM_080833 140893 Hs.180374 NM_080833 ENSG00000130701 RBBP8NL C20orf151 RBBP8 N-terminal like protein-coding chr6-1035 chr6 151060277 151060487 + 11.5 0.000 intron (NM_001350486, intron 26 of 27) L2b|LINE|L2 -42293 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr3-8754 chr3 2377439 2377649 + 11.5 0.000 intron (NM_175607, intron 3 of 24) intron (NM_175607, intron 3 of 24) 138715 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr1-4125 chr1 862637 862847 + 11.5 0.000 Intergenic Intergenic 14060 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr16-1390 chr16 85105020 85105230 + 11.5 0.000 intron (NM_001366920, intron 5 of 7) intron (NM_001366920, intron 5 of 7) 7347 NM_198491 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr8-3501 chr8 107961540 107961750 + 11.5 0.000 intron (NM_001282863, intron 2 of 4) MIRb|SINE|MIR 120294 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr11-2242 chr11 74739796 74740006 + 11.5 0.000 Intergenic MIR3|SINE|MIR -8475 NM_001278473 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr7-2606 chr7 151178355 151178565 + 11.5 0.000 intron (NM_001142459, intron 3 of 5) intron (NM_001142459, intron 3 of 5) 8790 NM_001142459 136371 Hs.647081 NM_080871 ENSG00000146926 ASB10 GLC1F ankyrin repeat and SOCS box containing 10 protein-coding chr1-4644 chr1 182603407 182603617 + 11.5 0.000 intron (NM_002928, intron 1 of 4) intron (NM_002928, intron 1 of 4) 877 NM_002928 6004 Hs.413297 NM_002928 ENSG00000143333 RGS16 A28-RGS14|A28-RGS14P|RGS-R regulator of G protein signaling 16 protein-coding chr3-2701 chr3 61638714 61638924 + 11.5 0.000 intron (NM_002841, intron 1 of 29) L1P4|LINE|L1 77248 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chrX-1169 chrX 47644079 47644289 + 11.5 0.000 intron (NM_005229, intron 1 of 5) intron (NM_005229, intron 1 of 5) 6420 NM_001114123 2002 Hs.181128 NM_005229 ENSG00000126767 ELK1 - ETS transcription factor ELK1 protein-coding chr5-1564 chr5 115601863 115602073 + 11.5 0.000 promoter-TSS (NR_109874) promoter-TSS (NR_109874) -187 NR_109875 101927100 Hs.745340 NR_109874 LOC101927100 - uncharacterized LOC101927100 ncRNA chr6-2407 chr6 151399825 151400035 + 11.5 0.000 Intergenic Intergenic -8371 NM_020861 57621 Hs.520073 NM_020861 ENSG00000181472 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding chr1-8125 chr1 10378479 10378689 + 11.5 0.000 3' UTR (NM_015074, exon 47 of 47) 3' UTR (NM_015074, exon 47 of 47) -20480 NM_001304451 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr5-1356 chr5 33032613 33032823 + 11.5 0.000 Intergenic Intergenic 85275 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr11-2216 chr11 64605205 64605415 + 11.5 0.000 TTS (NM_138734) TTS (NM_138734) 14090 NM_001276326 116085 Hs.174424 NM_144585 ENSG00000197891 SLC22A12 OAT4L|RST|URAT1 solute carrier family 22 member 12 protein-coding chr1-11871 chr1 40660926 40661136 + 11.5 0.000 intron (NM_014747, intron 1 of 7) L2c|LINE|L2 4651 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr8-1865 chr8 17226304 17226514 + 11.5 0.000 3' UTR (NM_001322092, exon 8 of 8) 3' UTR (NM_001322092, exon 8 of 8) 20049 NM_001322089 29883 Hs.587465 NM_013354 ENSG00000198791 CNOT7 CAF-1|CAF1|Caf1a|hCAF-1 CCR4-NOT transcription complex subunit 7 protein-coding chr16-1804 chr16 11682612 11682822 + 11.5 0.000 intron (NR_136673, intron 9 of 9) intron (NR_136673, intron 9 of 9) 14262 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr4-1701 chr4 169238571 169238781 + 11.5 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 32280 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr7-3933 chr7 128945899 128946109 + 11.5 0.000 exon (NM_001347928, exon 3 of 9) exon (NM_001347928, exon 3 of 9) 4736 NM_001364314 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr6-5336 chr6 145699410 145699620 + 11.5 0.000 intron (NM_001360064, intron 1 of 3) intron (NM_001360064, intron 1 of 3) -12638 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr10-1766 chr10 36779337 36779547 + 11.5 0.000 Intergenic Intergenic -346415 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr7-2007 chr7 33933960 33934170 + 11.5 0.000 intron (NM_133468, intron 3 of 15) intron (NM_133468, intron 3 of 15) 28526 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr3-5162 chr3 59502934 59503144 + 11.5 0.000 Intergenic L2a|LINE|L2 155458 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr20-931 chr20 10333255 10333465 + 11.5 0.000 Intergenic Intergenic 98565 NM_018848 8195 Hs.472119 NM_018848 ENSG00000125863 MKKS BBS6|HMCS|KMS|MKS McKusick-Kaufman syndrome protein-coding chr5-4485 chr5 9194654 9194864 + 11.5 0.000 intron (NM_003966, intron 10 of 22) intron (NM_003966, intron 10 of 22) -140864 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr7-6402 chr7 154187390 154187600 + 11.5 0.000 intron (NM_130797, intron 1 of 25) intron (NM_130797, intron 1 of 25) -117664 NM_001290252 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr13-962 chr13 112944001 112944211 + 11.5 0.000 Intergenic Intergenic 24532 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr20-1586 chr20 3931742 3931952 + 11.5 0.000 3' UTR (NM_001134338, exon 7 of 7) 3' UTR (NM_001134338, exon 7 of 7) -14284 NR_031722 100302282 NR_031722 ENSG00000283320 MIR103B2 MIR103-2-AS|MIR103-2AS|MIRN103-2AS|hsa-mir-103-2-as microRNA 103b-2 ncRNA chr11-2306 chr11 64754146 64754356 + 11.5 0.000 intron (NM_005609, intron 9 of 19) intron (NM_005609, intron 9 of 19) 5723 NM_005609 5837 Hs.154084 NM_005609 ENSG00000068976 PYGM - glycogen phosphorylase, muscle associated protein-coding chr2-2696 chr2 27566694 27566904 + 11.5 0.000 Intergenic Intergenic -9723 NM_032266 84226 Hs.131021 NM_032266 ENSG00000221843 C2orf16 - chromosome 2 open reading frame 16 protein-coding chr11-5553 chr11 98880725 98880935 + 11.5 0.000 Intergenic ERVL-B4-int|LTR|ERVL -140119 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr1-5556 chr1 235074677 235074887 + 11.5 0.000 Intergenic Intergenic -4964 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA chr17-5172 chr17 10156459 10156669 + 11.5 0.000 intron (NM_201433, intron 1 of 13) LTR33|LTR|ERVL 42042 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr4-903 chr4 105624729 105624939 + 11.5 0.000 intron (NM_001242729, intron 3 of 13) intron (NM_001242729, intron 3 of 13) 63243 NR_046840 100874374 Hs.668908 NR_046840 ENSG00000249885 ARHGEF38-IT1 - ARHGEF38 intronic transcript 1 ncRNA chr7-4402 chr7 96451080 96451290 + 11.5 0.000 Intergenic Intergenic 52338 NR_163949 chr1-3714 chr1 211632900 211633110 + 11.5 0.000 Intergenic Intergenic -6803 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr12-1905 chr12 76555041 76555251 + 11.5 0.000 intron (NM_001319652, intron 1 of 25) intron (NM_001319652, intron 1 of 25) 4625 NM_001319653 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr1-8105 chr1 8947400 8947610 + 11.5 0.000 intron (NM_001270502, intron 1 of 5) intron (NM_001270502, intron 1 of 5) 1637 NM_001215 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr17-2980 chr17 66837715 66837925 + 11.5 0.000 intron (NM_145811, intron 1 of 5) intron (NM_145811, intron 1 of 5) 2703 NM_145811 27091 Hs.278907 NM_014404 ENSG00000075429 CACNG5 - calcium voltage-gated channel auxiliary subunit gamma 5 protein-coding chr19-1945 chr19 37506421 37506631 + 11.5 0.000 promoter-TSS (NM_001013659) promoter-TSS (NM_001013659) -413 NM_001013659 390927 Hs.568010 NM_001013659 ENSG00000188227 ZNF793 - zinc finger protein 793 protein-coding chr17-2259 chr17 17300951 17301161 + 11.5 0.000 Intergenic MER52D|LTR|ERV1 -2317 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr6-5104 chr6 119848541 119848751 + 11.5 0.000 Intergenic L2c|LINE|L2 -166533 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr1-6781 chr1 81296877 81297087 + 11.5 0.000 Intergenic Intergenic -9210 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr12-4988 chr12 78241279 78241489 + 11.5 0.000 Intergenic Intergenic 118362 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr4-4454 chr4 54302344 54302554 + 11.5 0.000 Intergenic L1PB1|LINE|L1 -30443 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr9-8518 chr9 125886395 125886605 + 11.5 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 138317 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr12-5495 chr12 125883912 125884122 + 11.5 0.000 Intergenic Intergenic 99357 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr14-2537 chr14 21878219 21878429 + 11.5 0.000 Intergenic Intergenic -207307 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr14-949 chr14 45068369 45068579 + 11.5 0.000 exon (NM_015091, exon 17 of 19) exon (NM_015091, exon 17 of 19) -15642 NM_017922 55015 Hs.274337 NM_017922 ENSG00000185246 PRPF39 - pre-mRNA processing factor 39 protein-coding chr14-2828 chr14 23667786 23667996 + 11.5 0.000 Intergenic LTR78|LTR|ERV1 31527 NM_005794 10202 Hs.272499 NM_005794 ENSG00000100867 DHRS2 HEP27|SDR25C1 dehydrogenase/reductase 2 protein-coding chr7-4720 chr7 50610697 50610907 + 11.5 0.000 intron (NM_001350816, intron 12 of 17) intron (NM_001350816, intron 12 of 17) -45397 NM_001082971 1644 Hs.359698 NM_000790 ENSG00000132437 DDC AADC dopa decarboxylase protein-coding chr16-3033 chr16 49514379 49514589 + 11.5 0.000 intron (NM_001271620, intron 7 of 7) intron (NM_001271620, intron 7 of 7) 4101 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chrX-2687 chrX 118699110 118699320 + 11.5 0.000 Intergenic MER20|DNA|hAT-Charlie -28391 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr1-5156 chr1 160997310 160997520 + 11.5 0.000 3' UTR (NM_016946, exon 10 of 10) 3' UTR (NM_016946, exon 10 of 10) 23737 NM_001348091 50848 Hs.517293 NM_016946 ENSG00000158769 F11R CD321|JAM|JAM1|JAMA|JCAM|KAT|PAM-1 F11 receptor protein-coding chr13-2886 chr13 112652958 112653168 + 11.5 0.000 intron (NM_207440, intron 1 of 2) MER4A1_|LTR|ERV1 6019 NM_207440 400165 Hs.591213 NM_207440 ATP11AUN C13orf35|SMABLO1 ATP11A upstream neighbor protein-coding chr19-4695 chr19 18393940 18394150 + 11.5 0.000 intron (NM_145256, intron 1 of 1) intron (NM_145256, intron 1 of 1) 3577 NM_145256 126364 Hs.332156 NM_145256 ENSG00000175489 LRRC25 MAPA leucine rich repeat containing 25 protein-coding chr2-13477 chr2 147019569 147019779 + 11.5 0.000 Intergenic Charlie1a|DNA|hAT-Charlie 432617 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr8-4005 chr8 56456537 56456747 + 11.5 0.000 intron (NR_125813, intron 1 of 3) L1MCa|LINE|L1 -10001 NM_001135690 5179 Hs.339831 NM_006211 ENSG00000181195 PENK PE|PENK-A proenkephalin protein-coding chr16-1535 chr16 65176636 65176846 + 11.5 0.000 promoter-TSS (NR_110918) promoter-TSS (NR_110918) -168 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr3-6589 chr3 124951139 124951349 + 11.5 0.000 Intergenic Cheshire|DNA|hAT-Charlie -16493 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr2-5700 chr2 207600421 207600631 + 11.5 0.000 non-coding (NR_135473, exon 10 of 10) non-coding (NR_135473, exon 10 of 10) 24462 NM_145280 151194 Hs.664764 NM_145280 ENSG00000144401 METTL21A FAM119A|HCA557b|HSPA-KMT methyltransferase like 21A protein-coding chr19-3992 chr19 1728187 1728397 + 11.5 0.000 Intergenic Intergenic -25214 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr9-2894 chr9 133530494 133530704 + 11.5 0.000 Intergenic Intergenic -1565 NM_001145320 9719 Hs.522543 NM_014694 ENSG00000197859 ADAMTSL2 ADAMTSL-2|GPHYSD1 ADAMTS like 2 protein-coding chr5-5054 chr5 91634257 91634467 + 11.5 0.000 Intergenic Intergenic -251045 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr8-1531 chr8 93700907 93701117 + 11.5 0.000 promoter-TSS (NR_033858) promoter-TSS (NR_033858) 462 NR_156452 137392 Hs.125038 NM_145269 ENSG00000188343 FAM92A FAM92A1|PAPA9 family with sequence similarity 92 member A protein-coding chr19-2959 chr19 11075677 11075887 + 11.5 0.000 Intergenic AluY|SINE|Alu -13580 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr12-5487 chr12 125154479 125154689 + 11.5 0.000 Intergenic MIR|SINE|MIR -31802 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr12-2700 chr12 108854561 108854771 + 11.5 0.000 intron (NM_018984, intron 1 of 14) intron (NM_018984, intron 1 of 14) 2917 NM_018984 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr12-3198 chr12 52981088 52981298 + 11.5 0.000 Intergenic Intergenic -25263 NM_001330654 1975 Hs.648394 NM_001417 ENSG00000063046 EIF4B EIF-4B|PRO1843 eukaryotic translation initiation factor 4B protein-coding chr4-3680 chr4 44070656 44070866 + 11.5 0.000 Intergenic Intergenic 53699 NR_131958 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr4-2896 chr4 81352596 81352806 + 11.5 0.000 Intergenic Intergenic 119206 NM_001300736 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr9-3342 chr9 104596710 104596920 + 11.5 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 2598 NM_001004482 138799 Hs.553598 NM_001004482 ENSG00000277556 OR13C5 OR9-11 olfactory receptor family 13 subfamily C member 5 protein-coding chr14-906 chr14 61608905 61609115 + 11.5 0.000 intron (NR_039985, intron 1 of 2) intron (NR_039985, intron 1 of 2) -38357 NR_110416 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA KI270803.1-1 KI270803.1 505821 506031 + 11.5 0.000 NA NA NA NA chr11-3166 chr11 61786188 61786398 + 11.5 0.000 3' UTR (NM_001127392, exon 27 of 27) 3' UTR (NM_001127392, exon 27 of 27) 6268 NR_030342 693196 NR_030342 ENSG00000284108 MIR611 MIRN611|hsa-mir-611 microRNA 611 ncRNA chr13-2788 chr13 100749633 100749843 + 11.5 0.000 intron (NR_047687, intron 2 of 7) intron (NR_047687, intron 2 of 7) 41413 NR_047687 100885778 Hs.602949 NR_047687 ENSG00000233009 NALCN-AS1 - NALCN antisense RNA 1 ncRNA chr4-4727 chr4 91619647 91619857 + 11.5 0.000 Intergenic Charlie6|DNA|hAT-Charlie 657550 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr18-1285 chr18 60622824 60623034 + 11.5 0.000 Intergenic Intergenic -250154 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr12-1976 chr12 122898751 122898961 + 11.5 0.000 Intergenic Intergenic -2732 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr9-3693 chr9 105126988 105127198 + 11.5 0.000 Intergenic Intergenic -117512 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr6-4840 chr6 85413226 85413436 + 11.5 0.000 Intergenic L1MEf|LINE|L1 -8529 NR_134633 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr7-5629 chr7 54371739 54371949 + 11.5 0.000 Intergenic L1ME3|LINE|L1 41147 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr10-2154 chr10 92404593 92404803 + 11.5 0.000 Intergenic Intergenic -13963 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - microtubule affinity regulating kinase 2 pseudogene 9 pseudo chr10-5333 chr10 71438479 71438689 + 11.5 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 41650 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr11-4441 chr11 95337841 95338051 + 11.5 0.000 Intergenic Intergenic -105471 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr18-1654 chr18 59994589 59994799 + 11.5 0.000 Intergenic MER63A|DNA|hAT-Blackjack 94698 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr1-9675 chr1 49534428 49534638 + 11.5 0.000 intron (NR_136623, intron 2 of 12) intron (NR_136623, intron 2 of 12) -62448 NR_046839 100874313 Hs.551277 NR_046839 ENSG00000225623 AGBL4-IT1 - AGBL4 intronic transcript 1 ncRNA chr10-2939 chr10 21315847 21316057 + 11.5 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 56998 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr8-1438 chr8 130429599 130429809 + 11.5 0.000 intron (NM_001362925, intron 1 of 29) intron (NM_001362925, intron 1 of 29) 13956 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr1-9017 chr1 11447148 11447358 + 11.5 0.000 Intergenic MER102c|DNA|hAT-Charlie -31902 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr2-13560 chr2 154390716 154390926 + 11.5 0.000 intron (NM_052917, intron 9 of 12) intron (NM_052917, intron 9 of 12) 66617 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr11-5727 chr11 2342934 2343144 + 11.5 0.000 intron (NR_108080, intron 1 of 2) HERV16-int|LTR|ERVL -33138 NM_001297649 975 Hs.54457 NM_004356 ENSG00000110651 CD81 CVID6|S5.7|TAPA1|TSPAN28 CD81 molecule protein-coding chr1-7025 chr1 172154629 172154839 + 11.5 0.000 intron (NR_146559, intron 15 of 20) intron (NR_146559, intron 15 of 20) -9899 NR_103486 100628315 Hs.584880 NR_038397 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA chr6-5403 chr6 155165094 155165304 + 11.5 0.000 intron (NM_012454, intron 7 of 25) intron (NM_012454, intron 7 of 25) -51767 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr21-547 chr21 42636373 42636583 + 11.5 0.000 Intergenic Intergenic -17143 NM_002606 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr11-4628 chr11 17565226 17565436 + 11.5 0.000 intron (NM_001277269, intron 14 of 54) L1MC3|LINE|L1 17958 NM_001277269 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding chrX-3025 chrX 70145459 70145669 + 11.5 0.000 intron (NM_001370194, intron 2 of 3) L2a|LINE|L2 11629 NM_001370194 3476 Hs.496267 NM_001551 ENSG00000089289 IGBP1 ALPHA-4|IBP1 immunoglobulin binding protein 1 protein-coding chr2-9077 chr2 202564198 202564408 + 11.5 0.000 3' UTR (NM_001204, exon 13 of 13) 3' UTR (NM_001204, exon 13 of 13) -70666 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr1-6558 chr1 31412133 31412343 + 11.5 0.000 promoter-TSS (NM_178865) promoter-TSS (NM_178865) -975 NM_178865 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr2-2444 chr2 65023471 65023681 + 11.5 0.000 3' UTR (NM_001348407, exon 8 of 8) 3' UTR (NM_001348407, exon 8 of 8) -32840 NR_134966 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr7-1424 chr7 38335740 38335950 + 11.5 0.000 Intergenic Intergenic -5732 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr7-1956 chr7 100564186 100564396 + 11.5 0.000 exon (NM_006076, exon 11 of 12) exon (NM_006076, exon 11 of 12) 9609 NM_001348677 100316904 Hs.633863 NM_001168682 ENSG00000205307 SAP25 - Sin3A associated protein 25 protein-coding chr9-2868 chr9 129493629 129493839 + 11.5 0.000 intron (NR_038955, intron 2 of 4) intron (NR_038955, intron 2 of 4) 5074 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr4-2261 chr4 169604681 169604891 + 11.5 0.000 intron (NM_001199400, intron 1 of 32) intron (NM_001199400, intron 1 of 32) 7797 NM_001199398 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr19-2303 chr19 7368962 7369172 + 11.5 0.000 intron (NM_001367823, intron 2 of 28) AluSg7|SINE|Alu 20130 NM_001367823 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr6-2369 chr6 136262873 136263083 + 11.5 0.000 intron (NM_001363659, intron 10 of 11) MIRb|SINE|MIR -12667 NM_138419 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr7-5992 chr7 102730575 102730785 + 11.5 0.000 intron (NR_146066, intron 1 of 11) MLT1A|LTR|ERVL-MaLR 18014 NR_146066 100133005 NR_146066 RASA4DP - RAS p21 protein activator 4CD, pseudogene pseudo chr9-4768 chr9 133546503 133546713 + 11.5 0.000 intron (NM_001145320, intron 8 of 18) intron (NM_001145320, intron 8 of 18) 11904 NM_014694 9719 Hs.522543 NM_014694 ENSG00000197859 ADAMTSL2 ADAMTSL-2|GPHYSD1 ADAMTS like 2 protein-coding chr18-645 chr18 36247105 36247315 + 11.5 0.000 intron (NM_017947, intron 9 of 14) L1PB1|LINE|L1 -50503 NM_025135 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr16-1034 chr16 30417797 30418007 + 11.5 0.000 exon (NM_016643, exon 3 of 3) exon (NM_016643, exon 3 of 3) 1857 NR_145731 109616959 NR_145731 ENSG00000199787 SNORA80C - small nucleolar RNA, H/ACA box 80C snoRNA chr1-14670 chr1 60576847 60577057 + 11.5 0.000 intron (NR_146508, intron 4 of 7) intron (NR_146508, intron 4 of 7) 45733 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr13-1324 chr13 24145519 24145729 + 11.5 0.000 intron (NM_001286792, intron 3 of 14) intron (NM_001286792, intron 3 of 14) -15096 NM_001166271 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr2-5565 chr2 169223730 169223940 + 11.5 0.000 intron (NM_004525, intron 33 of 78) intron (NM_004525, intron 33 of 78) 138699 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr19-3965 chr19 732189 732399 + 11.5 0.000 intron (NM_002579, intron 5 of 8) MIRb|SINE|MIR -18818 NM_173481 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr7-2770 chr7 67928074 67928284 + 11.5 0.000 Intergenic Intergenic -92074 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr3-1963 chr3 61564654 61564864 + 11.5 0.000 intron (NM_002841, intron 1 of 29) CpG 3188 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr4-4101 chr4 5933563 5933773 + 11.5 0.000 Intergenic Intergenic -10340 NR_039608 100616201 NR_039608 ENSG00000263631 MIR378D1 mir-378d-1 microRNA 378d-1 ncRNA chr11-2577 chr11 118974011 118974221 + 11.5 0.000 intron (NM_181721, intron 1 of 5) L2a|LINE|L2 2355 NM_181721 283150 Hs.116679 NM_181721 ENSG00000176302 FOXR1 DLNB13|FOXN5 forkhead box R1 protein-coding chr1-3992 chr1 157636551 157636761 + 11.5 0.000 Intergenic Intergenic -38571 NM_031282 83417 Hs.120260 NM_031282 ENSG00000163518 FCRL4 CD307d|FCRH4|IGFP2|IRTA1 Fc receptor like 4 protein-coding chr1-5284 chr1 212238691 212238901 + 11.5 0.000 intron (NR_125984, intron 2 of 3) intron (NR_125984, intron 2 of 3) -4060 NR_125982 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr17-1867 chr17 34650042 34650252 + 11.5 0.000 Intergenic Intergenic 69398 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr6-4149 chr6 246543 246753 + 11.5 0.000 Intergenic Intergenic -41164 NR_126020 285766 Hs.657946 NR_126020 ENSG00000263667 LOC285766 - uncharacterized LOC285766 ncRNA chr4-4200 chr4 14000514 14000724 + 11.5 0.000 Intergenic L3|LINE|CR1 -111349 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr8-3606 chr8 142322881 142323091 + 11.5 0.000 intron (NM_001366903, intron 6 of 9) intron (NM_001366903, intron 6 of 9) 80196 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr10-3581 chr10 84075852 84076062 + 11.5 0.000 Intergenic Intergenic -63552 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr10-2193 chr10 28124139 28124349 + 11.5 0.000 intron (NR_134518, intron 6 of 16) intron (NR_134518, intron 6 of 16) -50866 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr12-2487 chr12 75635705 75635915 + 11.5 0.000 Intergenic LTR107_Mam|LTR|LTR -124201 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr9-3267 chr9 28444606 28444816 + 11.5 0.000 intron (NM_152570, intron 3 of 6) LTR2752|LTR|ERV1 274594 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr4-3807 chr4 111911630 111911840 + 11.5 0.000 Intergenic L2|LINE|L2 -233719 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr11-2567 chr11 108008625 108008835 + 11.5 0.000 promoter-TSS (NM_003478) promoter-TSS (NM_003478) -168 NM_003478 8065 Hs.440320 NM_003478 ENSG00000166266 CUL5 CUL-5|VACM-1|VACM1 cullin 5 protein-coding chr8-2944 chr8 30420490 30420700 + 11.5 0.000 intron (NM_001008710, intron 1 of 8) intron (NM_001008710, intron 1 of 8) -35194 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr18-2051 chr18 47410640 47410850 + 11.5 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 30249 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr13-3369 chr13 78887174 78887384 + 11.5 0.000 Intergenic Intergenic -47229 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr10-5895 chr10 118186660 118186870 + 11.5 0.000 intron (NR_026940, intron 3 of 3) intron (NR_026940, intron 3 of 3) -139824 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr11-2435 chr11 32386880 32387090 + 11.5 0.000 TTS (NM_001198552) TTS (NM_001198552) 13415 NM_001367854 7490 Hs.591980 NM_000378 ENSG00000184937 WT1 AWT1|GUD|NPHS4|WAGR|WIT-2|WT33 WT1 transcription factor protein-coding chr7-9530 chr7 139828501 139828711 + 11.5 0.000 promoter-TSS (NM_001166253) promoter-TSS (NM_001166253) -658 NM_001061 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr5-2037 chr5 81315513 81315723 + 11.5 0.000 Intergenic Intergenic 14031 NM_001131035 84240 Hs.15536 NM_032280 ENSG00000131732 ZCCHC9 PPP1R41 zinc finger CCHC-type containing 9 protein-coding chr8-2009 chr8 99447395 99447605 + 11.5 0.000 intron (NM_017890, intron 23 of 61) intron (NM_017890, intron 23 of 61) 89230 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA chr11-3003 chr11 122697814 122698024 + 11.5 0.000 intron (NM_001363365, intron 1 of 13) MIRb|SINE|MIR 42197 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr17-5470 chr17 40510244 40510454 + 11.5 0.000 Intergenic Intergenic -8726 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr14-1663 chr14 51912492 51912702 + 11.5 0.000 intron (NM_001243773, intron 2 of 3) intron (NM_001243773, intron 2 of 3) 5974 NR_126331 102723604 Hs.667541 NR_126331 ENSG00000258928 LOC102723604 - uncharacterized LOC102723604 ncRNA chr13-2546 chr13 64457873 64458083 + 11.5 0.000 Intergenic MIR|SINE|MIR -381967 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr16-2695 chr16 83779843 83780053 + 11.5 0.000 intron (NM_001220489, intron 10 of 12) intron (NM_001220489, intron 10 of 12) 24028 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr18-339 chr18 57769989 57770199 + 11.5 0.000 intron (NM_005603, intron 1 of 27) AluSc8|SINE|Alu 33221 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr1-4195 chr1 63271065 63271275 + 11.5 0.000 intron (NR_038252, intron 3 of 11) AluSz|SINE|Alu 46087 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr5-925 chr5 150640606 150640816 + 11.5 0.000 promoter-TSS (NM_007286) promoter-TSS (NM_007286) 51 NM_001109974 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr22-893 chr22 19289905 19290115 + 11.5 0.000 intron (NM_007098, intron 1 of 32) intron (NM_007098, intron 1 of 32) 1709 NM_001835 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr19-6954 chr19 47532162 47532372 + 11.5 0.000 exon (NM_001277075, exon 11 of 17) exon (NM_001277075, exon 11 of 17) -17204 NM_003827 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chr12-4916 chr12 67656143 67656353 + 11.5 0.000 intron (NM_006482, intron 2 of 2) intron (NM_006482, intron 2 of 2) 7503 NM_003583 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr15-1010 chr15 77569419 77569629 + 11.5 0.000 Intergenic MIR3|SINE|MIR 43929 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr9-5562 chr9 111075831 111076041 + 11.5 0.000 Intergenic Intergenic -36938 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr17-4006 chr17 73948939 73949149 + 11.5 0.000 Intergenic LTR16|LTR|ERVL -120507 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr12-2867 chr12 10540935 10541145 + 11.5 0.000 Intergenic L1PA16|LINE|L1 -12339 NR_146456 101060038 NR_146455 LINC02446 - long intergenic non-protein coding RNA 2446 ncRNA chr10-5967 chr10 123498289 123498499 + 11.5 0.000 Intergenic Intergenic -167961 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr3-4555 chr3 142660140 142660350 + 11.5 0.000 intron (NM_001172312, intron 1 of 15) intron (NM_001172312, intron 1 of 15) 3348 NM_001172312 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr17-3208 chr17 3591539 3591749 + 11.5 0.000 intron (NM_018727, intron 2 of 15) intron (NM_018727, intron 2 of 15) 1233 NM_080706 7442 Hs.579217 NM_018727 ENSG00000196689 TRPV1 VR1 transient receptor potential cation channel subfamily V member 1 protein-coding chr16-2158 chr16 56916575 56916785 + 11.5 0.000 TTS (NM_001126107) TTS (NM_001126107) 12416 NR_106923 102466752 NR_106923 ENSG00000283471 MIR6863 hsa-mir-6863 microRNA 6863 ncRNA chr13-1441 chr13 59391813 59392023 + 11.5 0.000 Intergenic LTR50|LTR|ERVL -620800 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr9-1892 chr9 121707495 121707705 + 11.5 0.000 intron (NM_032552, intron 3 of 16) intron (NM_032552, intron 3 of 16) -35185 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr19-2215 chr19 40494000 40494210 + 11.5 0.000 intron (NM_020971, intron 5 of 35) intron (NM_020971, intron 5 of 35) 27104 NM_020971 57731 Hs.32706 NM_020971 ENSG00000160460 SPTBN4 CMND|NEDHND|QV|SPNB4|SPTBN3 spectrin beta, non-erythrocytic 4 protein-coding chr4-7550 chr4 77334741 77334951 + 11.5 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -176907 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr4-1523 chr4 113979577 113979787 + 11.5 0.000 promoter-TSS (NM_024590) promoter-TSS (NM_024590) -35 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr5-4364 chr5 170733002 170733212 + 11.5 0.000 intron (NM_001278339, intron 6 of 7) intron (NM_001278339, intron 6 of 7) -50612 NM_001291985 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr13-2723 chr13 94697361 94697571 + 11.5 0.000 Intergenic MamRTE1|LINE|RTE-BovB 11020 NR_120417 101927248 NR_120417 LOC101927248 - uncharacterized LOC101927248 ncRNA chr3-5340 chr3 134348613 134348823 + 11.5 0.000 Intergenic Intergenic 19144 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr2-3574 chr2 43227577 43227787 + 11.5 0.000 non-coding (NR_027251, exon 1 of 1) non-coding (NR_027251, exon 1 of 1) 471 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr15-3478 chr15 95105400 95105610 + 11.5 0.000 Intergenic Intergenic 221595 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr7-3592 chr7 26155608 26155818 + 11.5 0.000 intron (NM_004289, intron 1 of 3) intron (NM_004289, intron 1 of 3) 3515 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chrX-339 chrX 153972539 153972749 + 11.5 0.000 promoter-TSS (NM_005334) promoter-TSS (NM_005334) -110 NM_003492 8269 Hs.23119 NM_003492 ENSG00000177854 TMEM187 CXorf12|DXS9878E|ITBA1 transmembrane protein 187 protein-coding chr10-3738 chr10 118311542 118311752 + 11.5 0.000 intron (NM_022063, intron 7 of 8) Charlie19a|DNA|hAT-Charlie 30677 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr22-747 chr22 19728221 19728431 + 11.5 0.000 Intergenic Intergenic 4783 NM_000407 2812 Hs.283743 NM_000407 ENSG00000203618 GP1BB BDPLT1|BS|CD42C|GPIBB|GPIbbeta glycoprotein Ib platelet subunit beta protein-coding chrX-3753 chrX 128088031 128088241 + 11.5 0.000 Intergenic Intergenic -35733 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr3-5626 chr3 10189669 10189879 + 11.5 0.000 intron (NM_001570, intron 2 of 12) intron (NM_001570, intron 2 of 12) 24855 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr1-10595 chr1 176614032 176614242 + 11.5 0.000 intron (NM_021936, intron 3 of 4) intron (NM_021936, intron 3 of 4) 150962 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr11-3788 chr11 63763381 63763591 + 11.5 0.000 exon (NM_001144936, exon 5 of 5) exon (NM_001144936, exon 5 of 5) 5289 NM_001144936 65998 Hs.191073 NM_001144936 ENSG00000188070 C11orf95 - chromosome 11 open reading frame 95 protein-coding chr18-2095 chr18 49983061 49983271 + 11.5 0.000 intron (NM_001080467, intron 8 of 39) LTR41C|LTR|ERVL 143397 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr11-2789 chr11 77942745 77942955 + 11.5 0.000 intron (NM_033547, intron 8 of 22) Tigger12c|DNA|TcMar-Tigger 51818 NM_033547 92105 Hs.533723 NM_033547 ENSG00000149262 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding chr7-7256 chr7 30160185 30160395 + 11.5 0.000 3' UTR (NM_152793, exon 3 of 3) 3' UTR (NM_152793, exon 3 of 3) 25304 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chrX-726 chrX 153480185 153480395 + 11.5 0.000 intron (NR_073156, intron 1 of 12) intron (NR_073156, intron 1 of 12) -9659 NM_017518 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr19-2454 chr19 651403 651613 + 11.5 0.000 intron (NM_001366018, intron 4 of 8) CpG 11582 NM_020637 27006 Hs.248087 NM_020637 ENSG00000070388 FGF22 - fibroblast growth factor 22 protein-coding chr19-2977 chr19 18863888 18864098 + 11.5 0.000 intron (NM_002911, intron 19 of 23) intron (NM_002911, intron 19 of 23) 32034 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr3-2618 chr3 184757369 184757579 + 11.5 0.000 non-coding (NR_110043, exon 3 of 3) non-coding (NR_110043, exon 3 of 3) 15681 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LINC02069 - long intergenic non-protein coding RNA 2069 ncRNA chr20-665 chr20 2524586 2524796 + 11.5 0.000 promoter-TSS (NM_001282495) promoter-TSS (NM_001282495) -169 NM_001282495 79175 Hs.516846 NM_024325 ENSG00000088876 ZNF343 dJ734P14.5 zinc finger protein 343 protein-coding chr3-3295 chr3 143676650 143676860 + 11.5 0.000 intron (NM_173653, intron 5 of 15) AluSc|SINE|Alu 171713 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr7-1505 chr7 1170012 1170222 + 11.5 0.000 Intergenic Intergenic 9332 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr4-4691 chr4 86613823 86614033 + 11.5 0.000 intron (NM_080685, intron 1 of 47) intron (NM_080685, intron 1 of 47) 19613 NM_006264 5783 Hs.436142 NM_006264 ENSG00000163629 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase non-receptor type 13 protein-coding chr12-4144 chr12 77625514 77625724 + 11.5 0.000 Intergenic L1MA4|LINE|L1 -205275 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr15-1971 chr15 40294391 40294601 + 11.5 0.000 intron (NM_001284298, intron 18 of 30) intron (NM_001284298, intron 18 of 30) -11910 NM_001190479 100131244 Hs.711376 NM_001190479 ENSG00000230778 ANKRD63 - ankyrin repeat domain 63 protein-coding chr12-2694 chr12 104535410 104535620 + 11.5 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -56118 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr20-1289 chr20 50440935 50441145 + 11.5 0.000 Intergenic Plat_L3|LINE|CR1 -69281 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr2-5854 chr2 238181132 238181342 + 11.5 0.000 intron (NM_030768, intron 9 of 11) intron (NM_030768, intron 9 of 11) 22267 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr3-2335 chr3 136621809 136622019 + 11.5 0.000 intron (NM_005862, intron 3 of 33) intron (NM_005862, intron 3 of 33) 130464 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr9-1263 chr9 129631392 129631602 + 11.5 0.000 intron (NM_001286799, intron 1 of 3) intron (NM_001286799, intron 1 of 3) 5053 NM_001286799 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr20-3882 chr20 30930976 30931186 + 11.5 0.000 Intergenic ALR/Alpha|Satellite|centr -326583 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr4-2193 chr4 121370921 121371131 + 11.5 0.000 intron (NM_198179, intron 1 of 5) MIRb|SINE|MIR 9992 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr15-3668 chr15 26785979 26786189 + 11.5 0.000 Intergenic L1MEf|LINE|L1 -12321 NM_021912 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr4-3270 chr4 112375583 112375793 + 11.5 0.000 intron (NM_001102406, intron 2 of 15) Tigger1|DNA|TcMar-Tigger 78319 NM_001102406 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr1-9367 chr1 29821269 29821479 + 11.5 0.000 Intergenic L1MC1|LINE|L1 216238 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr6-3454 chr6 153352875 153353085 + 11.5 0.000 Intergenic MER61A|LTR|ERV1 -221698 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr8-3126 chr8 61591469 61591679 + 11.5 0.000 intron (NM_004318, intron 14 of 24) intron (NM_004318, intron 14 of 24) 98237 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chrX-2825 chrX 136221817 136222027 + 11.5 0.000 intron (NM_001173516, intron 15 of 18) intron (NM_001173516, intron 15 of 18) 17020 NM_001369331 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr19-1085 chr19 17235756 17235966 + 11.5 0.000 exon (NM_005234, exon 3 of 4) exon (NM_005234, exon 3 of 4) 9481 NM_005234 2063 Hs.466148 NM_005234 ENSG00000160113 NR2F6 EAR-2|EAR2|ERBAL2 nuclear receptor subfamily 2 group F member 6 protein-coding chr19-6428 chr19 15500630 15500840 + 11.5 0.000 Intergenic L2a|LINE|L2 -7790 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr2-5804 chr2 231138757 231138967 + 11.5 0.000 intron (NM_001191037, intron 17 of 23) intron (NM_001191037, intron 17 of 23) -13820 NM_001320758 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chr4-1854 chr4 145347831 145348041 + 11.5 0.000 Intergenic Intergenic -7517 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr11-1772 chr11 47341422 47341632 + 11.5 0.000 intron (NM_000256, intron 17 of 33) intron (NM_000256, intron 17 of 33) 11175 NM_000256 4607 Hs.524906 NM_000256 ENSG00000134571 MYBPC3 CMD1MM|CMH4|FHC|LVNC10|MYBP-C myosin binding protein C, cardiac protein-coding chr2-3419 chr2 62596395 62596605 + 11.5 0.000 Intergenic Intergenic -77378 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr3-4569 chr3 168846686 168846896 + 11.5 0.000 Intergenic Intergenic -55154 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr3-4741 chr3 75054351 75054561 + 11.5 0.000 Intergenic Intergenic -160020 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr12-4545 chr12 26896029 26896239 + 11.5 0.000 Intergenic Intergenic 41847 NM_018164 55726 Hs.505077 NM_018164 ENSG00000064102 INTS13 ASUN|C12orf11|GCT1|Mat89Bb|NET48|SPATA30 integrator complex subunit 13 protein-coding chr17-3093 chr17 82854580 82854790 + 11.5 0.000 intron (NM_005993, intron 13 of 38) Tigger4|DNA|TcMar-Tigger -14663 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr16-4426 chr16 52495435 52495645 + 11.5 0.000 intron (NM_001080430, intron 1 of 6) MIRb|SINE|MIR 51603 NM_001080430 27324 Hs.132574 NM_001080430 ENSG00000103460 TOX3 CAGF9|TNRC9 TOX high mobility group box family member 3 protein-coding chr3-9145 chr3 32180199 32180409 + 11.5 0.000 Intergenic Intergenic -58375 NM_001320308 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr15-2020 chr15 48632827 48633037 + 11.5 0.000 intron (NM_000138, intron 2 of 65) intron (NM_000138, intron 2 of 65) 12856 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr9-4556 chr9 87350863 87351073 + 11.5 0.000 Intergenic AluJr|SINE|Alu -146260 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr4-4240 chr4 17757403 17757613 + 11.5 0.000 intron (NM_015688, intron 1 of 17) L1MC5|LINE|L1 24113 NM_015688 27146 Hs.744951 NM_015688 ENSG00000047662 FAM184B - family with sequence similarity 184 member B protein-coding chr22-1740 chr22 22061574 22061784 + 11.5 0.000 Intergenic Intergenic -17745 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr16-2585 chr16 85819446 85819656 + 11.5 0.000 Intergenic AluSz|SINE|Alu 19856 NM_001318802 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr6-3883 chr6 56652988 56653198 + 11.5 0.000 intron (NM_001144770, intron 7 of 94) intron (NM_001144770, intron 7 of 94) -10204 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr2-5180 chr2 32681065 32681275 + 11.5 0.000 intron (NM_017735, intron 9 of 19) intron (NM_017735, intron 9 of 19) 45915 NR_039922 100616219 NR_039922 ENSG00000265057 MIR4765 - microRNA 4765 ncRNA chr2-7227 chr2 220333950 220334160 + 11.5 0.000 Intergenic L1MA3|LINE|L1 -427490 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr9-1969 chr9 97564482 97564692 + 11.5 0.000 intron (NM_001166116, intron 6 of 9) intron (NM_001166116, intron 6 of 9) 62921 NM_003275 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr7-3387 chr7 120763312 120763522 + 11.5 0.000 Intergenic L1M1|LINE|L1 94727 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr11-3274 chr11 77037501 77037711 + 11.5 0.000 intron (NM_138706, intron 1 of 1) intron (NM_138706, intron 1 of 1) 3208 NM_138706 192134 Hs.352622 NM_138706 ENSG00000198488 B3GNT6 B3Gn-T6|BGnT-6|beta-1,3-Gn-T6|beta3Gn-T6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 protein-coding chr1-5525 chr1 202417889 202418099 + 11.5 0.000 intron (NM_002481, intron 2 of 23) intron (NM_002481, intron 2 of 23) -44720 NM_032104 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr13-2054 chr13 51618735 51618945 + 11.5 0.000 intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 34378 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr5-3887 chr5 149678965 149679175 + 11.5 0.000 Intergenic Intergenic -51240 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr8-2615 chr8 60911676 60911886 + 11.5 0.000 Intergenic Intergenic 55967 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr9-3713 chr9 111482038 111482248 + 11.5 0.000 intron (NM_001364929, intron 1 of 49) intron (NM_001364929, intron 1 of 49) 1419 NM_001364931 23392 Hs.368255 NM_001080398 ENSG00000136813 ECPAS ECM29|KIAA0368 Ecm29 proteasome adaptor and scaffold protein-coding chr2-8648 chr2 146839444 146839654 + 11.5 0.000 Intergenic MER77|LTR|ERVL 252492 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr10-5827 chr10 111395451 111395661 + 11.5 0.000 Intergenic AluY|SINE|Alu 281265 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr5-1967 chr5 117803631 117803841 + 11.5 0.000 intron (NR_104997, intron 1 of 2) intron (NR_104997, intron 1 of 2) 73375 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr18-2800 chr18 3518887 3519097 + 11.5 0.000 intron (NM_001242762, intron 7 of 9) intron (NM_001242762, intron 7 of 9) 52742 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr2-8962 chr2 189518237 189518447 + 11.5 0.000 Intergenic Intergenic 62469 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chrX-1521 chrX 23148759 23148969 + 11.5 0.000 intron (NR_073010, intron 2 of 11) intron (NR_073010, intron 2 of 11) 144282 NR_073010 100873065 Hs.628459 NR_046436 PTCHD1-AS DDX53-AS1|PTCHD1AS1|PTCHD1AS2 PTCHD1 antisense RNA (head to head) ncRNA chr7-4377 chr7 75432402 75432612 + 11.5 0.000 intron (NM_001099415, intron 7 of 14) L1ME3A|LINE|L1 22185 NR_033322 155400 Hs.436034 NM_001039575 ENSG00000223705 NSUN5P1 NSUN5B|WBSCR20B NSUN5 pseudogene 1 pseudo chr2-7815 chr2 46027398 46027608 + 11.5 0.000 intron (NM_005400, intron 10 of 14) L1ME3D|LINE|L1 -269904 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr16-3769 chr16 27984295 27984505 + 11.5 0.000 intron (NM_001109763, intron 1 of 6) ERVL47-int|LTR|ERVL 79314 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr10-4439 chr10 70469206 70469416 + 11.5 0.000 Intergenic MER5A|DNA|hAT-Charlie -9456 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr20-1775 chr20 53949374 53949584 + 11.5 0.000 intron (NM_001366297, intron 8 of 8) intron (NM_001366297, intron 8 of 8) -73770 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr6-3137 chr6 108656365 108656575 + 11.5 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) -95184 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr11-2368 chr11 128299364 128299574 + 11.5 0.000 Intergenic Intergenic 90703 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr10-2297 chr10 25060093 25060303 + 11.5 0.000 intron (NM_001270383, intron 2 of 5) intron (NM_001270383, intron 2 of 5) 2081 NM_001270383 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr17-1454 chr17 42567358 42567568 + 11.5 0.000 intron (NM_170607, intron 1 of 7) CpG 403 NM_198204 6945 Hs.383019 NM_170607 ENSG00000108788 MLX MAD7|MXD7|TCFL4|TF4|bHLHd13 MAX dimerization protein MLX protein-coding chr3-2654 chr3 24213096 24213306 + 11.5 0.000 intron (NM_001354714, intron 2 of 8) intron (NM_001354714, intron 2 of 8) 61877 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr20-2775 chr20 52995843 52996053 + 11.5 0.000 intron (NM_173485, intron 1 of 2) MIRb|SINE|MIR 23590 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr6-2097 chr6 157219469 157219679 + 11.5 0.000 Intergenic L1MD|LINE|L1 104685 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr2-2677 chr2 237471482 237471692 + 11.5 0.000 Intergenic Intergenic -14823 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr19-3326 chr19 5769312 5769522 + 11.5 0.000 intron (NM_152784, intron 18 of 21) MSTB|LTR|ERVL-MaLR 15329 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chr1-13630 chr1 10225626 10225836 + 11.5 0.000 intron (NM_001365952, intron 1 of 48) intron (NM_001365952, intron 1 of 48) -5033 NM_001365953 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr17-2096 chr17 81614178 81614388 + 11.5 0.000 intron (NM_001369698, intron 3 of 16) AluSc|SINE|Alu 22829 NM_017921 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr11-4208 chr11 62514138 62514348 + 11.5 0.000 intron (NM_024060, intron 4 of 5) intron (NM_024060, intron 4 of 5) 31421 NM_001346446 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding chr12-2873 chr12 15830549 15830759 + 11.5 0.000 Intergenic Intergenic -41266 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr3-4378 chr3 189588554 189588764 + 11.5 0.000 Intergenic Intergenic -8087 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr13-673 chr13 112575839 112576049 + 11.5 0.000 intron (NM_006322, intron 1 of 21) MLT1D|LTR|ERVL-MaLR 12209 NM_006322 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr11-4999 chr11 74147364 74147574 + 11.5 0.000 intron (NM_001286577, intron 3 of 32) Charlie8|DNA|hAT-Charlie 23533 NM_015531 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 domain containing 3 centriole elongation regulator protein-coding chr17-3651 chr17 6535212 6535422 + 11.5 0.000 intron (NM_031220, intron 2 of 19) intron (NM_031220, intron 2 of 19) 21238 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr3-5952 chr3 45920926 45921136 + 11.5 0.000 3' UTR (NM_024513, exon 18 of 18) 3' UTR (NM_024513, exon 18 of 18) -5307 NM_001276379 54585 Hs.30824 NM_020347 ENSG00000163818 LZTFL1 BBS17 leucine zipper transcription factor like 1 protein-coding chr11-6932 chr11 110891518 110891728 + 11.5 0.000 Intergenic Intergenic -178434 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr2-7384 chr2 6459138 6459348 + 11.5 0.000 Intergenic L1P4b|LINE|L1 -83821 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr22-1381 chr22 36671525 36671735 + 11.5 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 31228 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr10-3078 chr10 6847613 6847823 + 11.5 0.000 Intergenic L3|LINE|CR1 68120 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr17-2826 chr17 16793954 16794164 + 11.5 0.000 intron (NR_003190, intron 3 of 7) intron (NR_003190, intron 3 of 7) 5316 NM_001348162 100129396 Hs.712114 NM_001348162 FAM106C FAM106CP family with sequence similarity 106 member C protein-coding chr18-1131 chr18 3652877 3653087 + 11.5 0.000 intron (NM_001242761, intron 7 of 11) intron (NM_001242761, intron 7 of 11) 49245 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA GL000225.1-61 GL000225.1 39111 39321 + 11.5 0.000 NA NA NA NA chr19-2881 chr19 29883470 29883680 + 11.5 0.000 Intergenic AluSz|SINE|Alu -40082 NM_001252641 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr8-1797 chr8 98677942 98678152 + 11.5 0.000 intron (NM_001256313, intron 4 of 8) intron (NM_001256313, intron 4 of 8) 147624 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr1-10014 chr1 86099976 86100186 + 11.5 0.000 intron (NM_152890, intron 5 of 59) L1P2|LINE|L1 56390 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr10-6920 chr10 49390593 49390803 + 11.5 0.000 intron (NM_001276451, intron 3 of 6) MIRc|SINE|MIR 5391 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding chr3-5889 chr3 38097068 38097278 + 11.5 0.000 intron (NM_007335, intron 15 of 36) intron (NM_007335, intron 15 of 36) 39954 NM_001607 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr11-6038 chr11 28460460 28460670 + 11.5 0.000 Intergenic Intergenic 16983 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr5-3106 chr5 52746404 52746614 + 11.5 0.000 Intergenic Intergenic -41407 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr18-1361 chr18 12151844 12152054 + 11.5 0.000 Intergenic L1PA14|LINE|L1 -48830 NR_049896 497259 Hs.451609 NR_049896 C18orf61 - uncharacterized LOC497259 ncRNA chr12-3462 chr12 118330347 118330557 + 11.5 0.000 intron (NM_001346490, intron 1 of 21) intron (NM_001346490, intron 1 of 21) 29253 NM_001346489 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr4-2932 chr4 94542280 94542490 + 11.5 0.000 intron (NM_001011516, intron 3 of 9) intron (NM_001011516, intron 3 of 9) 90443 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr20-1874 chr20 42431939 42432149 + 11.5 0.000 intron (NM_133170, intron 9 of 31) intron (NM_133170, intron 9 of 31) -253439 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr3-2451 chr3 50484948 50485158 + 11.5 0.000 intron (NM_001291101, intron 1 of 37) intron (NM_001291101, intron 1 of 37) 18581 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr17-1713 chr17 54969101 54969311 + 11.5 0.000 promoter-TSS (NM_004375) promoter-TSS (NM_004375) -421 NM_001321518 1353 Hs.591171 NM_004375 ENSG00000166260 COX11 COX11P cytochrome c oxidase copper chaperone COX11 protein-coding chr9-5862 chr9 130858468 130858678 + 11.5 0.000 intron (NM_007313, intron 3 of 10) intron (NM_007313, intron 3 of 10) 23319 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr1-5154 chr1 160252054 160252264 + 11.5 0.000 intron (NR_028104, intron 1 of 12) intron (NR_028104, intron 1 of 12) -9590 NR_147618 100287049 Hs.657648 NR_147618 ENSG00000228606 LOC100287049 - uncharacterized LOC100287049 ncRNA chr2-10831 chr2 54628729 54628939 + 11.5 0.000 intron (NM_178313, intron 12 of 30) intron (NM_178313, intron 12 of 30) 70440 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr6-2390 chr6 146005752 146005962 + 11.5 0.000 Intergenic L1MA2|LINE|L1 -21850 NM_001278065 2911 Hs.32945 NM_000838 ENSG00000152822 GRM1 GPRC1A|MGLU1|MGLUR1|PPP1R85|SCA44|SCAR13 glutamate metabotropic receptor 1 protein-coding chr13-2702 chr13 91401533 91401743 + 11.5 0.000 intron (NM_004466, intron 1 of 7) intron (NM_004466, intron 1 of 7) 3017 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr19-2442 chr19 49614150 49614360 + 11.5 0.000 intron (NM_020719, intron 6 of 13) intron (NM_020719, intron 6 of 13) 23073 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding chr5-8196 chr5 106455157 106455367 + 11.5 0.000 Intergenic Intergenic 555752 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr12-3368 chr12 95913066 95913276 + 11.5 0.000 intron (NM_182496, intron 4 of 15) MIR|SINE|MIR 29443 NM_182496 120935 Hs.210377 NM_182496 ENSG00000165972 CCDC38 - coiled-coil domain containing 38 protein-coding chr8-2482 chr8 141650665 141650875 + 11.5 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 135543 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr1-3622 chr1 44048165 44048375 + 11.5 0.000 Intergenic Intergenic -16808 NM_001024845 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr16-4089 chr16 2176290 2176500 + 11.5 0.000 TTS (NM_020764) TTS (NM_020764) 20210 NM_020764 57524 Hs.643537 NM_020764 ENSG00000167971 CASKIN1 ANKS5A CASK interacting protein 1 protein-coding chr9-3396 chr9 129922027 129922237 + 11.5 0.000 intron (NM_001363755, intron 10 of 15) FLAM_C|SINE|Alu 52527 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr3-1683 chr3 12294930 12295140 + 11.5 0.000 intron (NM_001354667, intron 1 of 6) intron (NM_001354667, intron 1 of 6) 5965 NM_001354670 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr4-1959 chr4 135435000 135435210 + 11.5 0.000 Intergenic Intergenic -311546 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr17-5822 chr17 65084185 65084395 + 11.5 0.000 Intergenic L2c|LINE|L2 -16522 NR_110801 100507002 Hs.729924 NR_110801 LOC100507002 - uncharacterized LOC100507002 ncRNA chr7-7453 chr7 87021288 87021498 + 11.5 0.000 intron (NM_001142749, intron 1 of 21) intron (NM_001142749, intron 1 of 21) 18841 NM_001291991 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr9-2670 chr9 37921625 37921835 + 11.5 0.000 intron (NM_003028, intron 5 of 5) intron (NM_003028, intron 5 of 5) -17377 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr5-5072 chr5 95623733 95623943 + 11.5 0.000 Intergenic Intergenic 3751 NM_199243 285601 Hs.143315 NM_199243 ENSG00000178015 GPR150 PGR11 G protein-coupled receptor 150 protein-coding chr17-4385 chr17 21501633 21501843 + 11.5 0.000 Intergenic Intergenic 49940 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr3-7271 chr3 197039017 197039227 + 11.5 0.000 Intergenic L1ME1|LINE|L1 -9305 NM_033316 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chr9-4959 chr9 16866732 16866942 + 11.5 0.000 intron (NM_001317940, intron 1 of 5) intron (NM_001317940, intron 1 of 5) 3833 NM_001317940 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr13-2242 chr13 25226785 25226995 + 11.5 0.000 Intergenic AluSz|SINE|Alu 45558 NR_120427 102723318 Hs.549877 NR_120427 LINC01053 - long intergenic non-protein coding RNA 1053 ncRNA chr1-4634 chr1 172040995 172041205 + 11.5 0.000 intron (NM_001278252, intron 7 of 14) L2c|LINE|L2 -97708 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA chr9-4971 chr9 18164061 18164271 + 11.5 0.000 Intergenic Intergenic -309987 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr1-1461 chr1 24112476 24112686 + 11.5 0.000 promoter-TSS (NM_152372) promoter-TSS (NM_152372) -446 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr12-1448 chr12 120641425 120641635 + 11.5 0.000 intron (NM_001033677, intron 1 of 5) CpG 911 NM_001033677 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr7-6817 chr7 35785164 35785374 + 11.5 0.000 intron (NR_120511, intron 2 of 5) intron (NR_120511, intron 2 of 5) 15356 NR_120511 101928545 Hs.648103 NR_120511 SEPTIN7-AS1 SEPT7-AS1 SEPT7 antisense RNA 1 (head to head) ncRNA chr4-3831 chr4 122688881 122689091 + 11.5 0.000 non-coding (NR_104126, exon 11 of 11) non-coding (NR_104126, exon 11 of 11) 43472 NR_024041 729338 Hs.647968 NR_024041 CETN4P - centrin 4, pseudogene pseudo chr15-2161 chr15 77995265 77995475 + 11.5 0.000 3' UTR (NM_015079, exon 13 of 13) 3' UTR (NM_015079, exon 13 of 13) -1145 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr22-2421 chr22 18994277 18994487 + 11.5 0.000 non-coding (NR_002733, exon 4 of 4) non-coding (NR_002733, exon 4 of 4) -23452 NR_024159 25787 Hs.106311 NR_024159 DGCR9 DGS-A DiGeorge syndrome critical region gene 9 ncRNA chr16-2391 chr16 68298507 68298717 + 11.5 0.000 3' UTR (NM_001076785, exon 12 of 12) 3' UTR (NM_001076785, exon 12 of 12) 12334 NM_032178 84138 Hs.729520 NM_032178 ENSG00000103061 SLC7A6OS - solute carrier family 7 member 6 opposite strand protein-coding chr22-1314 chr22 46613068 46613278 + 11.5 0.000 intron (NM_001366660, intron 1 of 17) intron (NM_001366660, intron 1 of 17) -7213 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr14-1307 chr14 40890116 40890326 + 11.5 0.000 Intergenic Intergenic -64490 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr10-1383 chr10 31928561 31928771 + 11.5 0.000 intron (NM_001270696, intron 1 of 17) CpG 165 NM_018287 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr8-2915 chr8 144214201 144214411 + 11.5 0.000 TTS (NM_001099280) TTS (NM_001099280) 48431 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr12-2271 chr12 105967236 105967446 + 11.5 0.000 Intergenic MamGypLTR3a|LTR|Gypsy 172692 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr4-1160 chr4 153927582 153927792 + 11.5 0.000 Intergenic Intergenic -138604 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr7-2578 chr7 128695348 128695558 + 11.5 0.000 Intergenic LTR16B|LTR|ERVL -13608 NR_104243 84691 Hs.732440 NM_032599 ENSG00000135248 FAM71F1 FAM137A|NYD-SP18 family with sequence similarity 71 member F1 protein-coding chr9-5518 chr9 106799284 106799494 + 11.5 0.000 Intergenic Intergenic -63777 NM_021224 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chr1-5143 chr1 156678180 156678390 + 11.5 0.000 promoter-TSS (NM_006617) promoter-TSS (NM_006617) -878 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr1-15106 chr1 100424019 100424229 + 11.5 0.000 intron (NM_001319212, intron 4 of 13) intron (NM_001319212, intron 4 of 13) 71618 NM_001319210 8556 Hs.127411 NM_003672 ENSG00000079335 CDC14A DFNB105|DFNB32|DFNB35|cdc14|hCDC14 cell division cycle 14A protein-coding chr3-659 chr3 126654849 126655059 + 11.5 0.000 exon (NM_052883, exon 1 of 16) exon (NM_052883, exon 1 of 16) 170 NM_052883 114112 Hs.477475 NM_052883 ENSG00000197763 TXNRD3 TGR|TR2|TR2IT1|TRXR3|TXNRD3IT1|TXNRD3NB|TXNRD3NT1 thioredoxin reductase 3 protein-coding chr20-3455 chr20 51084215 51084425 + 11.5 0.000 Intergenic MER102c|DNA|hAT-Charlie -61213 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr12-2377 chr12 24615982 24616192 + 11.5 0.000 Intergenic Intergenic -31919 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr1-10426 chr1 158145489 158145699 + 11.5 0.000 Intergenic MER70-int|LTR|ERVL -4954 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr4-2764 chr4 15134313 15134523 + 11.5 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) 131937 NM_001177384 132864 Hs.656937 NM_182485 ENSG00000137449 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding chr17-2991 chr17 71545500 71545710 + 11.5 0.000 Intergenic Intergenic -343426 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr2-4132 chr2 164015361 164015571 + 11.5 0.000 Intergenic Intergenic -279458 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr18-1447 chr18 38722880 38723090 + 11.5 0.000 Intergenic Intergenic 899190 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr20-1176 chr20 1378147 1378357 + 11.5 0.000 non-coding (NR_040047, exon 3 of 3) non-coding (NR_040047, exon 3 of 3) 14709 NR_106929 102465524 NR_106929 ENSG00000284436 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA chr16-3157 chr16 77349867 77350077 + 11.5 0.000 intron (NM_199355, intron 10 of 22) L2b|LINE|L2 85062 NM_199355 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr2-7931 chr2 60092391 60092601 + 11.5 0.000 Intergenic Intergenic 290540 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr10-1755 chr10 21318330 21318540 + 11.5 0.000 Intergenic Intergenic 54515 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr14-1261 chr14 30882328 30882538 + 11.5 0.000 intron (NM_001347720, intron 7 of 10) L1ME4a|LINE|L1 7375 NR_038356 100506071 Hs.729195 NR_038356 ENSG00000258525 LOC100506071 - uncharacterized LOC100506071 ncRNA chr3-3083 chr3 134758690 134758900 + 11.5 0.000 Intergenic Intergenic -36465 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr9-3778 chr9 126397025 126397235 + 11.5 0.000 3' UTR (NM_001011703, exon 6 of 6) 3' UTR (NM_001011703, exon 6 of 6) 13374 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr4-3077 chr4 147979947 147980157 + 11.5 0.000 intron (NM_024605, intron 18 of 22) L1PA17|LINE|L1 197457 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr5-5798 chr5 176209539 176209749 + 11.5 0.000 Intergenic AluSz6|SINE|Alu -10349 NR_036494 643201 Hs.390285 NR_036494 ENSG00000248596 LOC643201 - centrosomal protein 192kDa pseudogene pseudo chr18-1613 chr18 46296467 46296677 + 11.5 0.000 Intergenic Intergenic -37446 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr7-5858 chr7 90267123 90267333 + 11.5 0.000 intron (NM_001039706, intron 5 of 22) intron (NM_001039706, intron 5 of 22) 22054 NM_001039706 79846 Hs.521014 NM_024788 ENSG00000105792 CFAP69 C7orf63|FAP69|SPGF24 cilia and flagella associated protein 69 protein-coding chr10-1964 chr10 29950411 29950621 + 11.5 0.000 Intergenic Intergenic 109070 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr12-5315 chr12 112644982 112645192 + 11.5 0.000 intron (NM_001347952, intron 1 of 21) MLT1K|LTR|ERVL-MaLR 50089 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr2-8482 chr2 126756148 126756358 + 11.5 0.000 Intergenic L2b|LINE|L2 100095 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr1-7005 chr1 169109900 169110110 + 11.5 0.000 intron (NM_001677, intron 1 of 5) intron (NM_001677, intron 1 of 5) 3315 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr12-2454 chr12 54294902 54295112 + 11.5 0.000 intron (NM_001261461, intron 3 of 3) intron (NM_001261461, intron 3 of 3) 772 NM_006163 4778 Hs.75643 NM_006163 ENSG00000123405 NFE2 NF-E2|p45 nuclear factor, erythroid 2 protein-coding chr8-4032 chr8 60418263 60418473 + 11.5 0.000 Intergenic Intergenic -4550 NR_103854 100505532 Hs.720321 NR_103854 LINC01301 - long intergenic non-protein coding RNA 1301 ncRNA chr17-5972 chr17 77072664 77072874 + 11.5 0.000 Intergenic LTR78B|LTR|ERV1 -15874 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr5-2314 chr5 58114370 58114580 + 11.5 0.000 intron (NR_104669, intron 4 of 4) MER5A|DNA|hAT-Charlie 7866 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr13-1237 chr13 87261213 87261423 + 11.5 0.000 Intergenic L1MEd|LINE|L1 349398 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr6-7407 chr6 52195223 52195433 + 11.5 0.000 Intergenic MLT2B3|LTR|ERVL 8953 NM_002190 3605 Hs.41724 NM_002190 ENSG00000112115 IL17A CTLA-8|CTLA8|IL-17|IL-17A|IL17 interleukin 17A protein-coding chr14-1473 chr14 21792091 21792301 + 11.5 0.000 Intergenic Intergenic -121179 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr5-7683 chr5 55369304 55369514 + 11.5 0.000 intron (NM_015360, intron 16 of 26) intron (NM_015360, intron 16 of 26) 61420 NM_015360 23517 Hs.274531 NM_015360 ENSG00000039123 MTREX Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118 Mtr4 exosome RNA helicase protein-coding chr3-3525 chr3 34260886 34261096 + 11.5 0.000 Intergenic Intergenic 462361 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr5-5262 chr5 121320660 121320870 + 11.5 0.000 Intergenic LTR81A|LTR|Gypsy -1785 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr5-1073 chr5 178729984 178730194 + 11.5 0.000 intron (NM_005649, intron 1 of 4) AluY|SINE|Alu 570 NM_001324339 6940 Hs.484324 NM_005649 ENSG00000169131 ZNF354A EZNF|HEL104|HKL1|KID-1|KID1|TCF17 zinc finger protein 354A protein-coding chr1-7087 chr1 189657866 189658076 + 11.5 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 818039 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr2-7526 chr2 21234805 21235015 + 11.5 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 110924 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr3-5163 chr3 60487207 60487417 + 11.5 0.000 intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) 130558 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr5-7368 chr5 20000451 20000661 + 11.5 0.000 intron (NM_001291956, intron 2 of 14) L2|LINE|L2 -12356 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr3-4945 chr3 8853013 8853223 + 11.5 0.000 Intergenic Intergenic -83504 NM_001354653 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr18-3058 chr18 30468534 30468744 + 11.5 0.000 Intergenic L2a|LINE|L2 169729 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr10-4960 chr10 28782647 28782857 + 11.5 0.000 intron (NR_120652, intron 2 of 3) intron (NR_120652, intron 2 of 3) 13298 NR_038375 100507605 Hs.119207 NR_038374 ENSG00000235824 LINC00837 - long intergenic non-protein coding RNA 837 ncRNA chr6-7971 chr6 113559626 113559836 + 11.5 0.000 Intergenic Intergenic 90344 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chrX-2993 chrX 43908730 43908940 + 11.5 0.000 Intergenic Plat_L3|LINE|CR1 -26385 NM_000898 4129 Hs.654473 NM_000898 ENSG00000069535 MAOB - monoamine oxidase B protein-coding chr12-2252 chr12 81503243 81503453 + 11.5 0.000 intron (NM_001220474, intron 2 of 30) A-rich|Low_complexity|Low_complexity 9043 NM_001282536 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr2-4081 chr2 130864969 130865179 + 11.5 0.000 intron (NM_001367493, intron 1 of 13) intron (NM_001367493, intron 1 of 13) 28160 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr17-5185 chr17 12727251 12727461 + 11.5 0.000 intron (NM_001146312, intron 5 of 13) intron (NM_001146312, intron 5 of 13) -21221 NR_104605 101928418 Hs.620346 NR_104605 ENSG00000227274 LOC101928418 - uncharacterized LOC101928418 ncRNA chr6-1019 chr6 84227702 84227912 + 11.5 0.000 promoter-TSS (NM_014895) promoter-TSS (NM_014895) -164 NM_001286206 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding chr4-1385 chr4 137694221 137694431 + 11.5 0.000 Intergenic Intergenic 148595 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr11-3264 chr11 74819356 74819566 + 11.5 0.000 intron (NM_001098638, intron 4 of 5) L2c|LINE|L2 70612 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr5-1220 chr5 132478697 132478907 + 11.5 0.000 Intergenic Intergenic 11971 NR_149068 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr4-2725 chr4 5409941 5410151 + 11.5 0.000 intron (NM_001345969, intron 5 of 10) intron (NM_001345969, intron 5 of 10) -114523 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr6-2612 chr6 127121418 127121628 + 11.5 0.000 intron (NM_032784, intron 1 of 4) intron (NM_032784, intron 1 of 4) 2852 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr2-4413 chr2 101304630 101304840 + 11.5 0.000 intron (NM_173647, intron 1 of 6) intron (NM_173647, intron 1 of 6) 3966 NM_173647 284996 Hs.142074 NM_173647 ENSG00000163162 RNF149 DNAPTP2 ring finger protein 149 protein-coding chr2-5678 chr2 202161413 202161623 + 11.5 0.000 intron (NM_001277372, intron 14 of 23) intron (NM_001277372, intron 14 of 23) -44460 NR_135244 729224 Hs.623895 NR_135243 KIAA2012-AS1 - KIAA2012 antisense RNA 1 ncRNA chr11-3502 chr11 126756900 126757110 + 11.5 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) 100919 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr5-682 chr5 122845545 122845755 + 11.5 0.000 promoter-TSS (NM_014035) promoter-TSS (NM_014035) 37 NM_014035 28966 Hs.483200 NM_014035 ENSG00000064652 SNX24 PRO1284|SBBI31 sorting nexin 24 protein-coding chr11-7016 chr11 117804889 117805099 + 11.5 0.000 intron (NM_001367905, intron 1 of 6) L3|LINE|CR1 -7778 NM_001367904 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr5-5151 chr5 107855191 107855401 + 11.5 0.000 Intergenic LTR40b|LTR|ERVL -184359 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr17-2234 chr17 4701242 4701452 + 11.5 0.000 intron (NM_014389, intron 1 of 16) intron (NM_014389, intron 1 of 16) 2790 NM_001278241 27043 Hs.744899 NM_014389 ENSG00000141456 PELP1 MNAR|P160 proline, glutamate and leucine rich protein 1 protein-coding chr12-6781 chr12 9006941 9007151 + 11.5 0.000 intron (NM_005810, intron 3 of 4) intron (NM_005810, intron 3 of 4) 17421 NR_137428 10219 Hs.558446 NM_005810 ENSG00000139187 KLRG1 2F1|CLEC15A|MAFA|MAFA-2F1|MAFA-L|MAFA-LIKE killer cell lectin like receptor G1 protein-coding chr3-9768 chr3 70392349 70392559 + 11.5 0.000 Intergenic Intergenic -79816 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr6-2738 chr6 87661049 87661259 + 11.5 0.000 intron (NM_181837, intron 16 of 19) intron (NM_181837, intron 16 of 19) 41079 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr14-1413 chr14 66356751 66356961 + 11.5 0.000 Intergenic Intergenic -129515 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr10-3191 chr10 91712416 91712626 + 11.5 0.000 Intergenic Intergenic -79450 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chr12-2321 chr12 132803762 132803972 + 11.5 0.000 intron (NM_001172557, intron 7 of 15) intron (NM_001172557, intron 7 of 15) 24522 NM_005895 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr2-7445 chr2 11937422 11937632 + 11.5 0.000 Intergenic Intergenic -69589 NR_110197 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chrX-751 chrX 17474922 17475132 + 11.5 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) 49146 NR_039925 100616249 NR_039925 ENSG00000265465 MIR4768 - microRNA 4768 ncRNA chrX-844 chrX 121156160 121156370 + 11.5 0.000 Intergenic MER41C|LTR|ERV1 108655 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chr3-3530 chr3 37244239 37244449 + 11.5 0.000 promoter-TSS (NR_149029) promoter-TSS (NR_149029) -149 NR_149029 152048 Hs.596176 NM_152532 ENSG00000270194 LOC152048 - uncharacterized FLJ31715 ncRNA KI270757.1-3 KI270757.1 67401 67611 + 11.5 0.000 NA NA NA NA chr7-1878 chr7 94041518 94041728 + 11.5 0.000 Intergenic L2b|LINE|L2 -37268 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr1-14874 chr1 80923733 80923943 + 11.5 0.000 Intergenic L2c|LINE|L2 282551 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr9-2706 chr9 86846802 86847012 + 11.5 0.000 Intergenic Intergenic 100599 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr4-1115 chr4 56049072 56049282 + 11.5 0.000 Intergenic CpG 100232 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr3-2716 chr3 78112356 78112566 + 11.5 0.000 Intergenic Intergenic -63498 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr10-1998 chr10 51501402 51501612 + 11.5 0.000 intron (NM_001098512, intron 3 of 17) intron (NM_001098512, intron 3 of 17) 198088 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr14-1764 chr14 88917077 88917287 + 11.5 0.000 Intergenic MLT2A2|LTR|ERVL 92531 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chrX-3078 chrX 123544150 123544360 + 11.5 0.000 Intergenic L2c|LINE|L2 188797 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr2-2527 chr2 189613101 189613311 + 11.5 0.000 Intergenic Intergenic -32395 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr12-4110 chr12 62069592 62069802 + 11.5 0.000 intron (NM_178539, intron 1 of 4) intron (NM_178539, intron 1 of 4) 123142 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr8-1563 chr8 122959741 122959951 + 11.5 0.000 intron (NM_001362797, intron 4 of 4) intron (NM_001362797, intron 4 of 4) 65926 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr2-10307 chr2 141297752 141297962 + 11.5 0.000 intron (NM_018557, intron 3 of 90) Tigger3a|DNA|TcMar-Tigger -711172 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr4-5256 chr4 171880197 171880407 + 11.5 0.000 intron (NM_001034845, intron 2 of 12) intron (NM_001034845, intron 2 of 12) -66695 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr4-8278 chr4 141788615 141788825 + 11.5 0.000 Intergenic Intergenic 152137 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr10-5853 chr10 114081600 114081810 + 11.5 0.000 Intergenic Intergenic 37839 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr4-4292 chr4 26489370 26489580 + 11.5 0.000 exon (NM_000730, exon 2 of 5) exon (NM_000730, exon 2 of 5) 1009 NM_000730 886 Hs.129 NM_000730 ENSG00000163394 CCKAR CCK-A|CCK1-R|CCK1R|CCKRA cholecystokinin A receptor protein-coding chr1-3197 chr1 151070388 151070598 + 11.5 0.000 promoter-TSS (NM_144618) promoter-TSS (NM_144618) -268 NM_001323913 126626 Hs.15671 NM_144618 ENSG00000143458 GABPB2 GABPB-2 GA binding protein transcription factor subunit beta 2 protein-coding chr9-5233 chr9 76963837 76964047 + 11.5 0.000 Intergenic Intergenic -55713 NM_001013735 442425 Hs.553843 NM_001013735 ENSG00000204612 FOXB2 bA159H20.4 forkhead box B2 protein-coding chr8-2077 chr8 125969028 125969238 + 11.5 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -17936 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr18-790 chr18 46407478 46407688 + 11.5 0.000 intron (NM_001256758, intron 1 of 5) intron (NM_001256758, intron 1 of 5) 73359 NR_046357 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr17-2316 chr17 46929524 46929734 + 11.5 0.000 intron (NM_001353116, intron 2 of 5) intron (NM_001353116, intron 2 of 5) 6469 NR_148351 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr5-5724 chr5 168844925 168845135 + 11.5 0.000 intron (NM_003062, intron 5 of 35) intron (NM_003062, intron 5 of 35) -76775 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr3-6450 chr3 105355780 105355990 + 11.5 0.000 Intergenic L2b|LINE|L2 -10828 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr12-5923 chr12 69132393 69132603 + 11.5 0.000 Intergenic Intergenic -107071 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr17-2906 chr17 42372367 42372577 + 11.5 0.000 intron (NM_213662, intron 1 of 23) L1MC2|LINE|L1 15970 NM_001369518 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr14-3994 chr14 35934684 35934894 + 11.5 0.000 Intergenic Intergenic 108451 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr8-2183 chr8 117521175 117521385 + 11.5 0.000 intron (NM_001282986, intron 1 of 2) intron (NM_001282986, intron 1 of 2) 567 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr19-2534 chr19 39678021 39678231 + 11.5 0.000 Intergenic ERVL-B4-int|LTR|ERVL -1248 NR_034156 400696 Hs.456377 NM_207646 ENSG00000226025 LGALS17A - galectin 14 pseudogene pseudo chr11-9872 chr11 73864023 73864233 + 11.5 0.000 intron (NR_134658, intron 6 of 6) L2c|LINE|L2 -12571 NM_001267806 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr9-7235 chr9 2266749 2266959 + 11.5 0.000 Intergenic Intergenic 108398 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr1-12263 chr1 225608964 225609174 + 11.5 0.000 intron (NM_001008493, intron 1 of 14) intron (NM_001008493, intron 1 of 14) 44054 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr19-2632 chr19 4357413 4357623 + 11.5 0.000 exon (NM_032868, exon 10 of 12) exon (NM_032868, exon 10 of 12) 13991 NM_001159846 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding chr8-787 chr8 73561074 73561284 + 11.5 0.000 intron (NM_001164384, intron 10 of 10) intron (NM_001164384, intron 10 of 10) 141105 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA chr2-4054 chr2 112631113 112631323 + 11.5 0.000 Intergenic Intergenic 12962 NR_033871 400999 Hs.585221 NR_033871 FLJ42351 - uncharacterized LOC400999 ncRNA chr13-836 chr13 72437794 72438004 + 11.5 0.000 Intergenic Intergenic 289730 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr19-1548 chr19 46731178 46731388 + 11.5 0.000 intron (NM_001039877, intron 5 of 17) intron (NM_001039877, intron 5 of 17) -14156 NM_001079880 25865 Hs.466987 NM_016457 ENSG00000105287 PRKD2 HSPC187|PKD2|nPKC-D2 protein kinase D2 protein-coding chr2-13144 chr2 118566665 118566875 + 11.5 0.000 Intergenic Intergenic 36196 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr3-4507 chr3 89288339 89288549 + 11.5 0.000 intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 180823 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr3-1647 chr3 124745272 124745482 + 11.5 0.000 non-coding (NR_033434, exon 5 of 5) non-coding (NR_033434, exon 5 of 5) 12938 NR_036088 100422864 NR_036088 ENSG00000265981 MIR544B - microRNA 544b ncRNA chr16-2821 chr16 70165144 70165354 + 11.5 0.000 intron (NR_126007, intron 1 of 2) intron (NR_126007, intron 1 of 2) 8199 NR_126007 400541 Hs.461183 NR_126007 ENSG00000247228 LOC400541 - uncharacterized LOC400541 ncRNA chr17-2926 chr17 48523649 48523859 + 11.5 0.000 Intergenic Intergenic 7257 NM_002144 3211 Hs.99992 NM_002144 ENSG00000120094 HOXB1 HCFP3|HOX2|HOX2I|Hox-2.9 homeobox B1 protein-coding chrX-1280 chrX 110491462 110491672 + 11.5 0.000 Intergenic L1PBa|LINE|L1 -28745 NR_002718 6998 Hs.592361 NR_002718 ENSG00000225366 TDGF1P3 CR-3|CRIPTO|CRIPTO-3|CRIPTO3|TDGF1|TDGF2|TDGF3 teratocarcinoma-derived growth factor 1 pseudogene 3 pseudo chr10-1525 chr10 71746301 71746511 + 11.5 0.000 intron (NM_022124, intron 36 of 67) intron (NM_022124, intron 36 of 67) -8556 NM_001168390 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr8-2584 chr8 47774377 47774587 + 11.5 0.000 intron (NM_001081640, intron 84 of 84) intron (NM_001081640, intron 84 of 84) -36318 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr1-15866 chr1 181870420 181870630 + 11.5 0.000 Intergenic L1MEc|LINE|L1 191187 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr8-2096 chr8 133496943 133497153 + 11.5 0.000 intron (NM_003033, intron 3 of 8) intron (NM_003033, intron 3 of 8) 74839 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr1-2048 chr1 247342988 247343198 + 11.5 0.000 Intergenic MER39B|LTR|ERV1 -11226 NM_001329733 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr1-5788 chr1 171223096 171223306 + 11.5 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -25270 NM_001282694 2326 Hs.1424 NM_002021 ENSG00000010932 FMO1 - flavin containing dimethylaniline monoxygenase 1 protein-coding chr14-1474 chr14 21868589 21868799 + 11.5 0.000 Intergenic Intergenic -197677 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr2-2857 chr2 160194432 160194642 + 11.5 0.000 intron (NM_001282390, intron 3 of 13) MIRb|SINE|MIR 5735 NM_001282355 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr18-997 chr18 31851593 31851803 + 11.5 0.000 intron (NM_014939, intron 24 of 28) intron (NM_014939, intron 24 of 28) -90818 NM_001034172 147407 Hs.567708 NM_001034172 ENSG00000141437 SLC25A52 MCART2 solute carrier family 25 member 52 protein-coding chr3-8414 chr3 106617274 106617484 + 11.5 0.000 Intergenic Intergenic 623259 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr3-2345 chr3 144362166 144362376 + 11.5 0.000 Intergenic L2c|LINE|L2 389190 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr5-2310 chr5 57057554 57057764 + 11.5 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -105529 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr1-6062 chr1 92167235 92167445 + 11.5 0.000 Intergenic Intergenic -1584 NM_015237 23285 Hs.21554 NM_015237 ENSG00000189195 KIAA1107 - KIAA1107 protein-coding chr11-8149 chr11 59283305 59283515 + 11.5 0.000 Intergenic MER52-int|LTR|ERV1 -70483 NM_001039396 219972 Hs.744920 NM_001039396 ENSG00000197629 MPEG1 MPG1|MPS1|Mpg-1|P-2 macrophage expressed 1 protein-coding chrX-1609 chrX 107455843 107456053 + 11.5 0.000 Intergenic Intergenic -66502 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr12-2403 chr12 45280524 45280734 + 11.5 0.000 intron (NM_001204803, intron 2 of 20) intron (NM_001204803, intron 2 of 20) -12061 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr7-5240 chr7 16960601 16960811 + 11.5 0.000 Intergenic L1PA14|LINE|L1 -78723 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr1-5374 chr1 246772460 246772670 + 11.5 0.000 Intergenic Intergenic -17052 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr4-2188 chr4 115426656 115426866 + 11.5 0.000 Intergenic Intergenic -313141 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr7-5355 chr7 30565475 30565685 + 11.5 0.000 intron (NR_038889, intron 3 of 6) intron (NR_038889, intron 3 of 6) 12199 NR_038889 401320 Hs.561708 NR_038889 GARS-DT - GARS divergent transcript ncRNA chr16-3527 chr16 30504848 30505058 + 11.5 0.000 TTS (NR_039743) TTS (NR_039743) 1034 NR_039743 100616405 NR_039743 ENSG00000266305 MIR4518 mir-4518 microRNA 4518 ncRNA chr2-3815 chr2 25160390 25160600 + 11.5 0.000 TTS (NM_000939) TTS (NM_000939) 8085 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr11-2416 chr11 11608876 11609086 + 11.5 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 13024 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr17-3526 chr17 68650685 68650895 + 11.5 0.000 intron (NR_110825, intron 2 of 4) L1ME3B|LINE|L1 22636 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr8-1125 chr8 116230692 116230902 + 11.5 0.000 intron (NR_046215, intron 4 of 13) intron (NR_046215, intron 4 of 13) 94262 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr4-4967 chr4 130902857 130903067 + 11.5 0.000 Intergenic Intergenic 526601 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr5-1476 chr5 89930750 89930960 + 11.5 0.000 Intergenic Intergenic 85865 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr13-2635 chr13 78403430 78403640 + 11.5 0.000 intron (NR_047001, intron 3 of 5) AluSg|SINE|Alu -192587 NR_158457 780529 Hs.587755 NR_158457 LOC780529 - uncharacterized LOC780529 ncRNA chr13-2789 chr13 100836781 100836991 + 11.5 0.000 intron (NR_047687, intron 2 of 7) intron (NR_047687, intron 2 of 7) 107478 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr12-4813 chr12 56191859 56192069 + 11.5 0.000 Intergenic Intergenic -2481 NM_003075 6601 Hs.236030 NM_003075 ENSG00000139613 SMARCC2 BAF170|CRACC2|CSS8|Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 protein-coding chr17-5842 chr17 67095346 67095556 + 11.5 0.000 intron (NM_001330447, intron 31 of 32) AluJr|SINE|Alu 50897 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr10-1935 chr10 5659959 5660169 + 11.5 0.000 intron (NR_037164, intron 1 of 6) intron (NR_037164, intron 1 of 6) 6531 NR_037164 79754 Hs.445899 NM_024701 ENSG00000196372 ASB13 - ankyrin repeat and SOCS box containing 13 protein-coding chr2-11193 chr2 157182912 157183122 + 11.5 0.000 Intergenic Intergenic -74688 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr5-5366 chr5 132704985 132705195 + 11.5 0.000 intron (NM_007054, intron 9 of 16) intron (NM_007054, intron 9 of 16) -22461 NR_134248 105379176 Hs.73917 NR_134248 LOC105379176 - uncharacterized LOC105379176 ncRNA chr11-2887 chr11 44930900 44931110 + 11.5 0.000 3' UTR (NM_130783, exon 10 of 10) 3' UTR (NM_130783, exon 10 of 10) 19155 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr1-3145 chr1 64751125 64751335 + 11.5 0.000 intron (NM_001366165, intron 1 of 11) intron (NM_001366165, intron 1 of 11) 6155 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr18-2081 chr18 48994157 48994367 + 11.5 0.000 Intergenic Intergenic -29441 NR_148999 100129878 Hs.437704 NR_148999 ENSG00000264269 LOC100129878 - uncharacterized LOC100129878 ncRNA chr8-3807 chr8 28423285 28423495 + 11.5 0.000 Intergenic AluSz|SINE|Alu -36930 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr21-587 chr21 41948239 41948449 + 11.5 0.000 promoter-TSS (NR_132773) promoter-TSS (NR_132773) -62 NR_132773 106635524 NR_132773 SNORA91 - small nucleolar RNA, H/ACA box 91 snoRNA chr16-984 chr16 86568250 86568460 + 11.4 0.000 promoter-TSS (NR_125795) promoter-TSS (NR_125795) -594 NR_125795 103752587 Hs.609366 NR_125795 ENSG00000260944 FOXC2-AS1 ODRUL FOXC2 antisense RNA 1 ncRNA chr5-4526 chr5 14958258 14958468 + 11.4 0.000 Intergenic Intergenic -86585 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr20-906 chr20 47663920 47664130 + 11.4 0.000 intron (NM_198596, intron 15 of 20) intron (NM_198596, intron 15 of 20) 122039 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr4-1980 chr4 181952552 181952762 + 11.4 0.000 Intergenic Intergenic -122684 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr21-641 chr21 9862139 9862349 + 11.4 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -41183 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr16-4179 chr16 10713601 10713811 + 11.4 0.000 Intergenic SATR1|Satellite|Satellite -18776 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr11-4888 chr11 46887075 46887285 + 11.4 0.000 intron (NM_002334, intron 16 of 37) intron (NM_002334, intron 16 of 37) 31370 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chr13-1320 chr13 114182862 114183072 + 11.4 0.000 Intergenic Intergenic -50344 NM_007368 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr2-5951 chr2 37639916 37640126 + 11.4 0.000 Intergenic Tigger5b|DNA|TcMar-Tigger 32178 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr11-1776 chr11 63613932 63614142 + 11.4 0.000 5' UTR (NM_001128203, exon 2 of 5) 5' UTR (NM_001128203, exon 2 of 5) 400 NM_007069 11145 Hs.502775 NM_007069 ENSG00000176485 PLAAT3 AdPLA|H-REV107|H-REV107-1|HRASLS3|HREV107|HREV107-1|HREV107-3|HRSL3|PLA2G16|PLAAT-3 phospholipase A and acyltransferase 3 protein-coding chr10-4325 chr10 24464212 24464422 + 11.4 0.000 intron (NM_001321681, intron 1 of 13) intron (NM_001321681, intron 1 of 13) -2214 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr4-4142 chr4 7823693 7823903 + 11.4 0.000 intron (NM_198595, intron 6 of 16) intron (NM_198595, intron 6 of 16) 48510 NM_001371090 chr16-1726 chr16 55119301 55119511 + 11.4 0.000 Intergenic Intergenic 188207 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr1-5946 chr1 25568175 25568385 + 11.4 0.000 3' UTR (NM_015627, exon 9 of 9) 3' UTR (NM_015627, exon 9 of 9) 24695 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr14-386 chr14 61189093 61189303 + 11.4 0.000 Intergenic Intergenic 92140 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr2-5480 chr2 133497526 133497736 + 11.4 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 70832 NM_207363 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr10-5690 chr10 99984223 99984433 + 11.4 0.000 intron (NM_015221, intron 1 of 16) intron (NM_015221, intron 1 of 16) 25619 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr16-2878 chr16 88939279 88939489 + 11.4 0.000 promoter-TSS (NM_001290330) promoter-TSS (NM_001290330) -653 NM_001290330 100129697 Hs.689377 NM_001290330 LOC100129697 - uncharacterized LOC100129697 protein-coding chr20-1642 chr20 20083768 20083978 + 11.4 0.000 intron (NM_015585, intron 6 of 26) intron (NM_015585, intron 6 of 26) 27227 NM_001167816 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr14-1563 chr14 71703541 71703751 + 11.4 0.000 intron (NM_001354286, intron 16 of 24) intron (NM_001354286, intron 16 of 24) 117348 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr15-818 chr15 89875038 89875248 + 11.4 0.000 intron (NM_001199058, intron 7 of 9) intron (NM_001199058, intron 7 of 9) 8887 NR_049807 100846993 NR_049807 ENSG00000264796 MIR5009 - microRNA 5009 ncRNA chr3-2114 chr3 53172438 53172648 + 11.4 0.000 intron (NM_001354676, intron 1 of 17) intron (NM_001354676, intron 1 of 17) 3840 NM_001354676 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr2-2111 chr2 25639418 25639628 + 11.4 0.000 intron (NM_033147, intron 2 of 19) MIR3|SINE|MIR 10699 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr17-7240 chr17 1893250 1893460 + 11.4 0.000 intron (NM_001355120, intron 15 of 16) intron (NM_001355120, intron 15 of 16) 63350 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr6-1476 chr6 43251123 43251333 + 11.4 0.000 intron (NM_032538, intron 2 of 14) intron (NM_032538, intron 2 of 14) 7747 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr2-10136 chr2 71796220 71796430 + 11.4 0.000 Intergenic Intergenic 329626 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr19-5243 chr19 43450700 43450910 + 11.4 0.000 Intergenic Intergenic 14803 NM_014400 27076 Hs.631594 NM_014400 ENSG00000124466 LYPD3 C4.4A LY6/PLAUR domain containing 3 protein-coding chr7-1194 chr7 47315331 47315541 + 11.4 0.000 intron (NM_022748, intron 20 of 30) intron (NM_022748, intron 20 of 30) 149367 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr17-2366 chr17 73164495 73164705 + 11.4 0.000 promoter-TSS (NM_001050) promoter-TSS (NM_001050) -410 NM_001050 6752 Hs.514451 NM_001050 ENSG00000180616 SSTR2 - somatostatin receptor 2 protein-coding chr3-4549 chr3 137927027 137927237 + 11.4 0.000 Intergenic Intergenic -71684 NM_001002026 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr19-7060 chr19 53888256 53888466 + 11.4 0.000 intron (NM_002739, intron 3 of 17) intron (NM_002739, intron 3 of 17) 6164 NM_002739 5582 Hs.631564 NM_002739 ENSG00000126583 PRKCG PKC-gamma|PKCC|PKCG|PKCI(3)|PKCgamma|SCA14 protein kinase C gamma protein-coding chr5-1798 chr5 56557705 56557915 + 11.4 0.000 intron (NR_161255, intron 1 of 5) intron (NR_161255, intron 1 of 5) 48446 NR_161255 101928448 Hs.208052 NM_001287053 ENSG00000225940 C5orf67 - chromosome 5 open reading frame 67 ncRNA chr15-1707 chr15 75105001 75105211 + 11.4 0.000 Intergenic Intergenic 61820 NM_001301104 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chr1-3488 chr1 78303771 78303981 + 11.4 0.000 intron (NR_027310, intron 3 of 5) intron (NR_027310, intron 3 of 5) 74277 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr1-5373 chr1 245810036 245810246 + 11.4 0.000 intron (NM_022743, intron 10 of 11) intron (NM_022743, intron 10 of 11) -575624 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr9-3310 chr9 86470408 86470618 + 11.4 0.000 Intergenic Intergenic -116103 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr3-9580 chr3 54999366 54999576 + 11.4 0.000 intron (NM_018398, intron 31 of 37) intron (NM_018398, intron 31 of 37) -32369 NM_001304389 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr2-4449 chr2 207408151 207408361 + 11.4 0.000 Intergenic Intergenic -121706 NR_163947 chr4-5233 chr4 168995735 168995945 + 11.4 0.000 intron (NM_032783, intron 4 of 4) intron (NM_032783, intron 4 of 4) 14415 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr10-1521 chr10 46284298 46284508 + 11.4 0.000 promoter-TSS (NR_160731) promoter-TSS (NR_160731) -447 NR_160731 105378577 Hs.646293 NR_160731 LOC105378577 - uncharacterized LOC105378577 ncRNA chr6-5157 chr6 125867595 125867805 + 11.4 0.000 intron (NM_181782, intron 3 of 15) intron (NM_181782, intron 3 of 15) -48842 NR_126386 104355145 Hs.590370 NR_126386 ENSG00000232131 NCOA7-AS1 - NCOA7 antisense RNA 1 ncRNA chr10-2269 chr10 132020639 132020849 + 11.4 0.000 Intergenic Intergenic -38731 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr15-950 chr15 34582927 34583137 + 11.4 0.000 intron (NR_027410, intron 1 of 23) CpG 538 NR_027410 440270 Hs.720151 NM_001023567 ENSG00000215252 GOLGA8B GOLGA5 golgin A8 family member B protein-coding chr10-3130 chr10 51370048 51370258 + 11.4 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 70580 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr10-5182 chr10 59524926 59525136 + 11.4 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -161850 NM_001347840 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr8-4157 chr8 77392545 77392755 + 11.4 0.000 Intergenic Intergenic -58047 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr17-4600 chr17 4138090 4138300 + 11.4 0.000 intron (NM_015113, intron 1 of 54) intron (NM_015113, intron 1 of 54) 4835 NM_015113 23140 Hs.277624 NM_015113 ENSG00000074755 ZZEF1 ZZZ4 zinc finger ZZ-type and EF-hand domain containing 1 protein-coding chr9-2761 chr9 105893314 105893524 + 11.4 0.000 Intergenic Intergenic 198878 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr15-1910 chr15 78385655 78385865 + 11.4 0.000 Intergenic L2a|LINE|L2 45407 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr12-2488 chr12 75759794 75760004 + 11.4 0.000 Intergenic Intergenic -248290 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr11-7293 chr11 45340249 45340459 + 11.4 0.000 Intergenic Intergenic -15017 NR_120558 101928812 Hs.444059 NR_120557 ENSG00000254427 LINC02696 - long intergenic non-protein coding RNA 2696 ncRNA chr5-2589 chr5 83925742 83925952 + 11.4 0.000 Intergenic Intergenic -204992 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr17-4840 chr17 60088202 60088412 + 11.4 0.000 non-coding (NR_135648, exon 2 of 2) non-coding (NR_135648, exon 2 of 2) 160 NR_030732 645638 Hs.463652 NR_030732 ENSG00000261040 WFDC21P LNCDC|linc-DC|lnc-DC WAP four-disulfide core domain 21, pseudogene pseudo chr12-4867 chr12 61655861 61656071 + 11.4 0.000 Intergenic LTR49-int|LTR|ERV1 536873 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr10-3647 chr10 98920788 98920998 + 11.4 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) 3675 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr19-2212 chr19 39240029 39240239 + 11.4 0.000 Intergenic Charlie4a|DNA|hAT-Charlie 4872 NM_172139 282617 Hs.406744 NM_172139 ENSG00000197110 IFNL3 IFN-lambda-3|IFN-lambda-4|IL-28B|IL-28C|IL28B|IL28C interferon lambda 3 protein-coding chr14-699 chr14 63165858 63166068 + 11.4 0.000 Intergenic SVA_D|Retroposon|SVA -38480 NM_020663 57381 Hs.656339 NM_020663 ENSG00000126785 RHOJ ARHJ|RASL7B|TC10B|TCL ras homolog family member J protein-coding chr8-755 chr8 94234314 94234524 + 11.4 0.000 Intergenic Intergenic -17141 NM_001144663 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding chr4-2800 chr4 29278545 29278755 + 11.4 0.000 Intergenic L2a|LINE|L2 64358 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr17-3281 chr17 43042158 43042368 + 11.4 0.000 Intergenic Intergenic 17032 NM_005440 8153 Hs.603111 NM_005440 ENSG00000108830 RND2 ARHN|RHO7|RhoN Rho family GTPase 2 protein-coding chr19-3743 chr19 48267176 48267386 + 11.4 0.000 Intergenic Intergenic -2800 NM_153608 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr17-3785 chr17 39107941 39108151 + 11.4 0.000 intron (NM_020405, intron 5 of 13) intron (NM_020405, intron 5 of 13) 43591 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr19-1825 chr19 4443646 4443856 + 11.4 0.000 TTS (NM_005483) TTS (NM_005483) -2227 NR_039901 100616371 NR_039901 ENSG00000266437 MIR4746 mir-4746 microRNA 4746 ncRNA chr1-4813 chr1 21262905 21263115 + 11.4 0.000 intron (NM_001113347, intron 2 of 16) intron (NM_001113347, intron 2 of 16) 16605 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr5-5053 chr5 91565255 91565465 + 11.4 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -182043 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr21-408 chr21 42070331 42070541 + 11.4 0.000 promoter-TSS (NM_173568) promoter-TSS (NM_173568) -881 NM_173568 89766 Hs.242520 NM_173568 ENSG00000177398 UMODL1 - uromodulin like 1 protein-coding chr11-3875 chr11 86231264 86231474 + 11.4 0.000 Intergenic Intergenic -13015 NM_001308007 8726 Hs.503510 NM_003797 ENSG00000074266 EED COGIS|HEED|WAIT1 embryonic ectoderm development protein-coding chr17-7448 chr17 13035859 13036069 + 11.4 0.000 Intergenic L1ME1|LINE|L1 -17900 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr13-4074 chr13 76498020 76498230 + 11.4 0.000 Intergenic L2|LINE|L2 388280 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr1-2760 chr1 67840396 67840606 + 11.4 0.000 intron (NR_040077, intron 1 of 9) intron (NR_040077, intron 1 of 9) -7034 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr19-1231 chr19 19516061 19516271 + 11.4 0.000 promoter-TSS (NM_015965) promoter-TSS (NM_015965) -59 NM_015965 51079 Hs.534453 NM_015965 ENSG00000186010 NDUFA13 B16.6|CDA016|CGI-39|GRIM-19|GRIM19|MC1DN28 NADH:ubiquinone oxidoreductase subunit A13 protein-coding chr9-8458 chr9 123000665 123000875 + 11.4 0.000 intron (NM_012197, intron 10 of 25) FLAM_C|SINE|Alu -32873 NM_005294 2844 Hs.722039 NM_005294 ENSG00000011454 GPR21 - G protein-coupled receptor 21 protein-coding chr7-4803 chr7 93262496 93262706 + 11.4 0.000 intron (NM_001257998, intron 10 of 28) intron (NM_001257998, intron 10 of 28) 30235 NM_017667 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr1-10020 chr1 86799182 86799392 + 11.4 0.000 Intergenic Intergenic 94711 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr2-8951 chr2 188495423 188495633 + 11.4 0.000 intron (NM_001252669, intron 4 of 8) intron (NM_001252669, intron 4 of 8) 198036 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr2-5466 chr2 127708508 127708718 + 11.4 0.000 intron (NM_018383, intron 21 of 21) intron (NM_018383, intron 21 of 21) 7116 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding chr12-2581 chr12 116300231 116300441 + 11.4 0.000 Intergenic X9_LINE|LINE|L1 -23150 NM_015335 23389 Hs.603766 NM_015335 ENSG00000123066 MED13L MRFACD|PROSIT240|THRAP2|TRAP240L mediator complex subunit 13L protein-coding chr3-1752 chr3 177597235 177597445 + 11.4 0.000 intron (NR_047568, intron 2 of 3) intron (NR_047568, intron 2 of 3) 155419 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr15-1108 chr15 82046708 82046918 + 11.4 0.000 promoter-TSS (NM_032246) promoter-TSS (NM_032246) -795 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr12-5133 chr12 98808870 98809080 + 11.4 0.000 intron (NM_001352203, intron 3 of 10) intron (NM_001352203, intron 3 of 10) 85799 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr2-4959 chr2 186609556 186609766 + 11.4 0.000 intron (NM_001145000, intron 2 of 27) L2b|LINE|L2 9456 NM_001144999 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr10-2461 chr10 18334100 18334310 + 11.4 0.000 intron (NM_000724, intron 1 of 12) intron (NM_000724, intron 1 of 12) -6504 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr1-3291 chr1 240576371 240576581 + 11.4 0.000 intron (NM_022469, intron 1 of 1) intron (NM_022469, intron 1 of 1) 35679 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr1-13117 chr1 194283859 194284069 + 11.4 0.000 Intergenic Intergenic 979219 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr22-2319 chr22 39144519 39144729 + 11.4 0.000 intron (NM_001346744, intron 2 of 5) intron (NM_001346744, intron 2 of 5) 8056 NM_001346743 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr2-5006 chr2 220556596 220556806 + 11.4 0.000 Intergenic Intergenic -650136 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr1-2972 chr1 155174305 155174515 + 11.4 0.000 promoter-TSS (NM_001256601) promoter-TSS (NM_001256601) -344 NR_046329 80128 Hs.287735 NM_025058 ENSG00000163462 TRIM46 GENEY|TRIFIC tripartite motif containing 46 protein-coding chr12-6037 chr12 110845112 110845322 + 11.4 0.000 Intergenic MamRTE1|LINE|RTE-BovB -1770 NM_001286244 160762 Hs.437141 NM_152591 ENSG00000173093 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding chr5-2756 chr5 149172173 149172383 + 11.4 0.000 intron (NM_001370418, intron 1 of 18) MER112|DNA|hAT-Charlie 30547 NM_001370418 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr9-3823 chr9 129637046 129637256 + 11.4 0.000 3' UTR (NM_017873, exon 6 of 6) 3' UTR (NM_017873, exon 6 of 6) 5000 NM_177999 140459 Hs.125037 NM_017873 ENSG00000148331 ASB6 - ankyrin repeat and SOCS box containing 6 protein-coding chr2-5860 chr2 239153896 239154106 + 11.4 0.000 intron (NM_006037, intron 7 of 26) intron (NM_006037, intron 7 of 26) 41456 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr4-1910 chr4 40309234 40309444 + 11.4 0.000 intron (NR_121641, intron 2 of 3) intron (NR_121641, intron 2 of 3) 2154 NR_121641 101060498 Hs.351492 NR_121640 ENSG00000249241 LINC02265 - long intergenic non-protein coding RNA 2265 ncRNA chr7-6244 chr7 134368933 134369143 + 11.4 0.000 Intergenic Intergenic -52108 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr11-3824 chr11 67733943 67734153 + 11.4 0.000 Intergenic SATR2|Satellite|Satellite -52824 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr1-2032 chr1 170247799 170248009 + 11.4 0.000 Intergenic Intergenic 36304 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr19-2240 chr19 47843638 47843848 + 11.4 0.000 TTS (NM_000554) TTS (NM_000554) 21806 NM_000554 1406 Hs.617342 NM_000554 ENSG00000105392 CRX CORD2|CRD|LCA7|OTX3 cone-rod homeobox protein-coding chr1-4481 chr1 15902979 15903189 + 11.4 0.000 intron (NM_015001, intron 3 of 14) intron (NM_015001, intron 3 of 14) -54937 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr15-1145 chr15 62845698 62845908 + 11.4 0.000 Intergenic L2b|LINE|L2 21846 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr2-4029 chr2 105454980 105455190 + 11.4 0.000 Intergenic Intergenic -16572 NM_001318897 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr12-6182 chr12 15175080 15175290 + 11.4 0.000 intron (NM_032918, intron 2 of 4) L1MB8|LINE|L1 23262 NR_046559 100873980 Hs.569154 NR_046559 ENSG00000255660 RERG-AS1 - RERG antisense RNA 1 ncRNA chr5-1369 chr5 65810326 65810536 + 11.4 0.000 intron (NM_020726, intron 11 of 12) intron (NM_020726, intron 11 of 12) 88226 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chr2-3493 chr2 201993847 201994057 + 11.4 0.000 Intergenic Intergenic -40635 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chrX-731 chrX 154096623 154096833 + 11.4 0.000 intron (NM_001369391, intron 1 of 6) intron (NM_001369391, intron 1 of 6) 241 NM_001369394 4204 Hs.200716 NM_004992 ENSG00000169057 MECP2 AUTSX3|MRX16|MRX79|MRXS13|MRXSL|PPMX|RS|RTS|RTT methyl-CpG binding protein 2 protein-coding chr15-2602 chr15 63523679 63523889 + 11.4 0.000 intron (NM_001256702, intron 1 of 13) intron (NM_001256702, intron 1 of 13) 19191 NM_006537 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr1-15362 chr1 147886298 147886508 + 11.4 0.000 Intergenic Intergenic -16392 NM_005267 2703 Hs.632441 NM_005267 ENSG00000121634 GJA8 CAE|CAE1|CTRCT1|CX50|CZP1|MP70 gap junction protein alpha 8 protein-coding chrX-2671 chrX 116503826 116504036 + 11.4 0.000 Intergenic L1MD1|LINE|L1 -40955 NM_001017978 203413 Hs.97892 NM_001017978 ENSG00000204019 CT83 CXorf61|KK-LC-1|KKLC1 cancer/testis antigen 83 protein-coding chr3-3506 chr3 14442867 14443077 + 11.4 0.000 intron (NM_001134367, intron 2 of 14) intron (NM_001134367, intron 2 of 14) 40366 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr2-3331 chr2 191172040 191172250 + 11.4 0.000 Intergenic Intergenic -20549 NM_001243835 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr4-1754 chr4 130478476 130478686 + 11.4 0.000 Intergenic Intergenic 102220 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr20-1526 chr20 43665832 43666042 + 11.4 0.000 Intergenic Intergenic -1082 NM_001278610 4605 Hs.179718 NM_002466 ENSG00000101057 MYBL2 B-MYB|BMYB MYB proto-oncogene like 2 protein-coding chr3-3450 chr3 149658517 149658727 + 11.4 0.000 promoter-TSS (NM_015472) promoter-TSS (NM_015472) 412 NR_040250 100128025 Hs.594912 NR_040250 ENSG00000241313 WWTR1-AS1 - WWTR1 antisense RNA 1 ncRNA chr9-1721 chr9 112059626 112059836 + 11.4 0.000 intron (NM_022486, intron 13 of 16) intron (NM_022486, intron 13 of 16) 115566 NM_001282643 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr4-2610 chr4 137300285 137300495 + 11.4 0.000 Intergenic Intergenic -87591 NR_149105 105377441 Hs.668386 NR_149105 LINC02511 - long intergenic non-protein coding RNA 2511 ncRNA chrX-377 chrX 123959835 123960045 + 11.4 0.000 promoter-TSS (NM_001042749) promoter-TSS (NM_001042749) -620 NM_001042749 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr1-3162 chr1 84907625 84907835 + 11.4 0.000 Intergenic Intergenic -14524 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding chr18-616 chr18 7084931 7085141 + 11.4 0.000 intron (NM_005559, intron 1 of 62) intron (NM_005559, intron 1 of 62) 32761 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr15-1470 chr15 101220423 101220633 + 11.4 0.000 intron (NM_014918, intron 2 of 2) L2a|LINE|L2 31520 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr11-2959 chr11 76667475 76667685 + 11.4 0.000 intron (NM_001370191, intron 1 of 2) intron (NM_001370191, intron 1 of 2) 2358 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr18-377 chr18 24063333 24063543 + 11.4 0.000 intron (NM_001135993, intron 1 of 13) intron (NM_001135993, intron 1 of 13) -47978 NR_110796 102724246 Hs.569872 NR_110796 ENSG00000264745 TTC39C-AS1 - TTC39C antisense RNA 1 ncRNA chr19-2198 chr19 19342747 19342957 + 11.4 0.000 exon (NM_015329, exon 9 of 19) exon (NM_015329, exon 9 of 19) 22023 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chr11-10246 chr11 101127989 101128199 + 11.4 0.000 promoter-TSS (NR_073144) promoter-TSS (NR_073144) 969 NM_001271161 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr3-4256 chr3 145490435 145490645 + 11.4 0.000 Intergenic LTR1D|LTR|ERV1 578645 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr10-4549 chr10 100339896 100340106 + 11.4 0.000 Intergenic Intergenic -7232 NM_005063 6319 Hs.558396 NM_005063 ENSG00000099194 SCD FADS5|MSTP008|SCD1|SCDOS|hSCD1 stearoyl-CoA desaturase protein-coding chr19-1952 chr19 42965349 42965559 + 11.4 0.000 Intergenic Intergenic -28247 NM_001206650 5676 Hs.709203 NM_002783 ENSG00000221878 PSG7 PSBG-7|PSG1|PSGGA pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene) protein-coding chr6-2139 chr6 9005663 9005873 + 11.4 0.000 Intergenic L2c|LINE|L2 353559 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr10-5502 chr10 82214473 82214683 + 11.4 0.000 intron (NM_001165973, intron 2 of 10) AluJr4|SINE|Alu 18342 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr18-1141 chr18 8712580 8712790 + 11.4 0.000 Intergenic Intergenic -4696 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr12-3118 chr12 29435086 29435296 + 11.4 0.000 intron (NR_073172, intron 1 of 1) intron (NR_073172, intron 1 of 1) 45897 NR_073172 101055625 Hs.569158 NR_073170 ENSG00000257599 OVCH1-AS1 - OVCH1 antisense RNA 1 ncRNA chr4-1867 chr4 186029836 186030046 + 11.4 0.000 Intergenic Intergenic -39214 NM_003265 7098 Hs.657724 NM_003265 ENSG00000164342 TLR3 CD283|IIAE2 toll like receptor 3 protein-coding chr19-1903 chr19 48124182 48124392 + 11.4 0.000 intron (NR_135500, intron 21 of 27) MIR|SINE|MIR -13435 NM_001159322 8605 Hs.631562 NM_003706 ENSG00000105499 PLA2G4C CPLA2-gamma phospholipase A2 group IVC protein-coding chrX-3640 chrX 97157634 97157844 + 11.4 0.000 intron (NM_007309, intron 22 of 26) MER41C|LTR|ERV1 273831 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr5-2848 chr5 68339966 68340176 + 11.4 0.000 Intergenic MIR|SINE|MIR 47494 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr2-5414 chr2 112344701 112344911 + 11.4 0.000 Intergenic Intergenic 69209 NM_198581 376940 Hs.190477 NM_198581 ENSG00000188177 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding chr4-4994 chr4 136709219 136709429 + 11.4 0.000 Intergenic Intergenic -484432 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr3-2081 chr3 5026346 5026556 + 11.4 0.000 Intergenic CpG -46490 NR_125916 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr2-3529 chr2 239027789 239027999 + 11.4 0.000 Intergenic Intergenic 41020 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr6-1725 chr6 36752616 36752826 + 11.4 0.000 intron (NM_001314019, intron 3 of 10) MIR3|SINE|MIR 4679 NM_001314020 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr1-4176 chr1 31712698 31712908 + 11.4 0.000 Intergenic Intergenic -8786 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chrX-5070 chrX 124539233 124539443 + 11.4 0.000 intron (NM_014253, intron 15 of 30) L2a|LINE|L2 193056 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr12-2768 chr12 52865250 52865460 + 11.4 0.000 Intergenic Intergenic -16361 NM_173352 196374 Hs.665267 NM_173352 ENSG00000170423 KRT78 CK-78|K5B|K78|Kb40 keratin 78 protein-coding chr22-889 chr22 50454568 50454778 + 11.4 0.000 exon (NM_002972, exon 36 of 41) exon (NM_002972, exon 36 of 41) 20362 NM_002972 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr7-2695 chr7 23468610 23468820 + 11.4 0.000 intron (NM_006547, intron 1 of 14) CpG 1776 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding chr5-964 chr5 150377494 150377704 + 11.4 0.000 intron (NM_001008657, intron 14 of 17) intron (NM_001008657, intron 14 of 17) 19902 NM_001135245 6949 Hs.519672 NM_000356 ENSG00000070814 TCOF1 MFD1|TCS|TCS1|treacle treacle ribosome biogenesis factor 1 protein-coding chr12-4197 chr12 97129914 97130124 + 11.4 0.000 Intergenic MLT2C1|LTR|ERVL 222553 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr10-4060 chr10 34538592 34538802 + 11.4 0.000 intron (NM_001184789, intron 2 of 22) intron (NM_001184789, intron 2 of 22) 276599 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr10-7706 chr10 30215224 30215434 + 11.4 0.000 intron (NR_120653, intron 1 of 2) intron (NR_120653, intron 1 of 2) 3477 NR_120653 101929279 Hs.559153 NR_120653 LOC101929279 - uncharacterized LOC101929279 ncRNA chr14-1229 chr14 98750800 98751010 + 11.4 0.000 Intergenic L3|LINE|CR1 39292 NR_161368 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr6-3961 chr6 100623376 100623586 + 11.4 0.000 intron (NM_006828, intron 30 of 41) intron (NM_006828, intron 30 of 41) -159806 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr12-1665 chr12 54196060 54196270 + 11.4 0.000 Intergenic Intergenic -7171 NM_001351260 23583 Hs.632721 NM_014311 ENSG00000123415 SMUG1 FDG|HMUDG|UNG3 single-strand-selective monofunctional uracil-DNA glycosylase 1 protein-coding chr1-4386 chr1 162678553 162678763 + 11.4 0.000 intron (NM_006182, intron 2 of 17) intron (NM_006182, intron 2 of 17) 46194 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr2-9285 chr2 221798109 221798319 + 11.4 0.000 Intergenic LTR79|LTR|ERVL -224012 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr4-2160 chr4 88364070 88364280 + 11.4 0.000 Intergenic MER11A|LTR|ERVK -14564 NM_001165136 55008 Hs.529317 NM_017912 ENSG00000138642 HERC6 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 protein-coding chr1-6236 chr1 224498647 224498857 + 11.4 0.000 intron (NM_001322302, intron 2 of 6) intron (NM_001322302, intron 2 of 6) 63903 NR_136294 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr10-2036 chr10 79137150 79137360 + 11.4 0.000 intron (NM_020338, intron 2 of 24) intron (NM_020338, intron 2 of 24) 68289 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr4-1627 chr4 74364676 74364886 + 11.4 0.000 promoter-TSS (NM_001432) promoter-TSS (NM_001432) -364 NM_001432 2069 Hs.115263 NM_001432 ENSG00000124882 EREG EPR|ER|Ep epiregulin protein-coding chr2-3267 chr2 11175504 11175714 + 11.4 0.000 intron (NR_104231, intron 7 of 7) intron (NR_104231, intron 7 of 7) 20142 NR_104231 130814 Hs.274415 NM_152391 ENSG00000162976 SLC66A3 C2orf22|PQLC3 solute carrier family 66 member 3 protein-coding chr21-329 chr21 42338094 42338304 + 11.4 0.000 Intergenic Intergenic 12795 NM_005423 7032 Hs.2979 NM_005423 ENSG00000160181 TFF2 SML1|SP trefoil factor 2 protein-coding chr2-6430 chr2 149768482 149768692 + 11.4 0.000 intron (NR_145421, intron 4 of 4) intron (NR_145421, intron 4 of 4) 90604 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr17-1855 chr17 29208150 29208360 + 11.4 0.000 Intergenic MER20|DNA|hAT-Charlie -27857 NM_001346765 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr1-5975 chr1 36670119 36670329 + 11.4 0.000 Intergenic L2b|LINE|L2 -186910 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr13-1783 chr13 19060331 19060541 + 11.4 0.000 Intergenic Intergenic 52177 NR_026852 348021 Hs.314114 NR_026852 ENSG00000232685 LINC00442 - long intergenic non-protein coding RNA 442 ncRNA chr17-8164 chr17 61017664 61017874 + 11.4 0.000 intron (NM_001320470, intron 16 of 25) intron (NM_001320470, intron 16 of 25) 339918 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr10-6030 chr10 126459309 126459519 + 11.4 0.000 non-coding (NR_148989, exon 7 of 7) non-coding (NR_148989, exon 7 of 7) 33484 NR_148989 728158 Hs.646701 NR_148989 LOC728158 - uncharacterized LOC728158 ncRNA chr15-1495 chr15 42531507 42531717 + 11.4 0.000 3' UTR (NM_003825, exon 8 of 8) 3' UTR (NM_003825, exon 8 of 8) 17181 NM_153260 255252 Hs.234681 NM_153260 ENSG00000180979 LRRC57 - leucine rich repeat containing 57 protein-coding chr12-4234 chr12 109087290 109087500 + 11.4 0.000 TTS (NM_001001655) TTS (NM_001001655) 6077 NM_001145374 121642 Hs.374458 NM_001001655 ENSG00000189046 ALKBH2 ABH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase protein-coding chr1-4059 chr1 205774849 205775059 + 11.4 0.000 exon (NM_003929, exon 2 of 6) exon (NM_003929, exon 2 of 6) 528 NM_001135662 8934 Hs.115325 NM_003929 ENSG00000117280 RAB29 RAB7L|RAB7L1 RAB29, member RAS oncogene family protein-coding chr9-3295 chr9 75880642 75880852 + 11.4 0.000 Intergenic MIRc|SINE|MIR -9897 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr4-1950 chr4 118765401 118765611 + 11.4 0.000 intron (NM_014822, intron 9 of 22) intron (NM_014822, intron 9 of 22) 70620 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr2-5714 chr2 215107987 215108197 + 11.4 0.000 intron (NR_103740, intron 2 of 54) intron (NR_103740, intron 2 of 54) 30534 NM_173076 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr7-2080 chr7 1292575 1292785 + 11.4 0.000 Intergenic Intergenic 59808 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr4-1199 chr4 81441361 81441571 + 11.4 0.000 intron (NM_152545, intron 9 of 13) intron (NM_152545, intron 9 of 13) 30441 NM_001300736 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr11-3373 chr11 125689714 125689924 + 11.4 0.000 Intergenic Intergenic -8972 NM_001612 56 Hs.169222 NM_001612 ENSG00000134940 ACRV1 D11S4365|SP-10|SPACA2 acrosomal vesicle protein 1 protein-coding chr16-1752 chr16 86059392 86059602 + 11.4 0.000 Intergenic Intergenic -136684 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr17-3520 chr17 65218853 65219063 + 11.4 0.000 intron (NM_003835, intron 17 of 18) L2a|LINE|L2 81588 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr8-3017 chr8 123386292 123386502 + 11.4 0.000 intron (NM_014109, intron 1 of 27) L1MB3|LINE|L1 10050 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr21-337 chr21 45958404 45958614 + 11.4 0.000 Intergenic Intergenic -14461 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr9-2753 chr9 100065029 100065239 + 11.4 0.000 intron (NM_015051, intron 1 of 11) Tigger3|DNA|TcMar-Tigger 33866 NM_015051 23071 Hs.154023 NM_015051 ENSG00000023318 ERP44 PDIA10|TXNDC4 endoplasmic reticulum protein 44 protein-coding chr17-3640 chr17 4101370 4101580 + 11.4 0.000 intron (NM_015113, intron 9 of 54) intron (NM_015113, intron 9 of 54) 41555 NM_015113 23140 Hs.277624 NM_015113 ENSG00000074755 ZZEF1 ZZZ4 zinc finger ZZ-type and EF-hand domain containing 1 protein-coding chr12-3375 chr12 99276503 99276713 + 11.4 0.000 intron (NM_152788, intron 12 of 25) MLT1B|LTR|ERVL-MaLR -121518 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr8-4284 chr8 95952855 95953065 + 11.4 0.000 Intergenic MLT2D|LTR|ERVL -4612 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr16-2205 chr16 85115134 85115344 + 11.4 0.000 Intergenic Intergenic -2767 NM_001366920 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr20-753 chr20 32396788 32396998 + 11.4 0.000 intron (NM_015338, intron 3 of 11) MER30|DNA|hAT-Charlie 37828 NM_001363734 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chrX-978 chrX 149497700 149497910 + 11.4 0.000 intron (NM_006123, intron 5 of 7) intron (NM_006123, intron 5 of 7) 7501 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr1-16540 chr1 232811982 232812192 + 11.4 0.000 Intergenic Intergenic 7195 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr5-5152 chr5 108093353 108093563 + 11.4 0.000 intron (NM_001163315, intron 6 of 8) intron (NM_001163315, intron 6 of 8) 288640 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr4-4660 chr4 83362509 83362719 + 11.4 0.000 Intergenic L2c|LINE|L2 -27461 NM_001166498 10855 Hs.44227 NM_006665 ENSG00000173083 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding chr21-560 chr21 44050401 44050611 + 11.4 0.000 intron (NM_003274, intron 3 of 22) intron (NM_003274, intron 3 of 22) -23818 NM_001351709 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr22-1341 chr22 21829613 21829823 + 11.4 0.000 intron (NM_002745, intron 1 of 8) L1MC4a|LINE|L1 37962 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr11-7803 chr11 100709620 100709830 + 11.4 0.000 intron (NM_001367945, intron 1 of 25) intron (NM_001367945, intron 1 of 25) -21770 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr17-4170 chr17 2780622 2780832 + 11.4 0.000 intron (NM_001330058, intron 1 of 24) intron (NM_001330058, intron 1 of 24) 3969 NM_001330058 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr22-2206 chr22 17130366 17130576 + 11.4 0.000 non-coding (NR_103793, exon 3 of 4) non-coding (NR_103793, exon 3 of 4) 8876 NR_103793 100996342 Hs.714550 NR_103793 ENSG00000235478 LINC01664 - long intergenic non-protein coding RNA 1664 ncRNA chr6-3230 chr6 142802069 142802279 + 11.4 0.000 intron (NM_006734, intron 2 of 9) intron (NM_006734, intron 2 of 9) 143002 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chrX-841 chrX 119237191 119237401 + 11.4 0.000 intron (NM_001282621, intron 1 of 1) (GT)n|Simple_repeat|Simple_repeat 1011 NM_006667 10857 Hs.90061 NM_006667 ENSG00000101856 PGRMC1 Dap1|HPR6.6|IZA|MPR progesterone receptor membrane component 1 protein-coding chr17-4736 chr17 39660493 39660703 + 11.4 0.000 intron (NM_001165938, intron 10 of 13) MIR|SINE|MIR -4748 NM_003673 8557 Hs.77628 NM_003673 ENSG00000173991 TCAP CMD1N|CMH25|LGMD2G|LGMDR7|T-cap|TELE|telethonin titin-cap protein-coding chr18-453 chr18 79394034 79394244 + 11.4 0.000 Intergenic CpG -1791 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr12-1542 chr12 93972705 93972915 + 11.4 0.000 Intergenic Intergenic -29204 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr18-1354 chr18 6016191 6016401 + 11.4 0.000 intron (NR_158609, intron 15 of 17) intron (NR_158609, intron 15 of 17) -120342 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr3-3104 chr3 141204538 141204748 + 11.4 0.000 Intergenic MER57A1|LTR|ERV1 -27182 NM_001282728 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr12-3933 chr12 728626 728836 + 11.4 0.000 Intergenic MER3|DNA|hAT-Charlie -23848 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr1-7188 chr1 212368020 212368230 + 11.4 0.000 intron (NM_001198862, intron 8 of 8) L1MA4|LINE|L1 15307 NR_004389 692157 Hs.707958 NR_004389 ENSG00000201544 SNORA16B U98b small nucleolar RNA, H/ACA box 16B snoRNA chr17-2445 chr17 27096617 27096827 + 11.4 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -7481 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr12-2030 chr12 53231412 53231622 + 11.4 0.000 intron (NM_000966, intron 1 of 9) intron (NM_000966, intron 1 of 9) 692 NM_001243731 5916 Hs.1497 NM_000966 ENSG00000172819 RARG NR1B3|RARC retinoic acid receptor gamma protein-coding chr6-8189 chr6 133291843 133292053 + 11.4 0.000 intron (NM_172103, intron 2 of 18) intron (NM_172103, intron 2 of 18) 50449 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr19-4776 chr19 32872264 32872474 + 11.4 0.000 Intergenic Intergenic -2602 NM_014270 11136 Hs.743345 NM_014270 ENSG00000021488 SLC7A9 BAT1|CSNU3 solute carrier family 7 member 9 protein-coding chr2-2987 chr2 41966546 41966756 + 11.4 0.000 Intergenic Intergenic -12845 NR_161189 400950 Hs.738713 NM_001242815 ENSG00000205086 C2orf91 - chromosome 2 open reading frame 91 ncRNA chr13-964 chr13 113357564 113357774 + 11.4 0.000 intron (NR_046541, intron 2 of 2) intron (NR_046541, intron 2 of 2) 5996 NR_120385 100874068 Hs.661837 NR_046541 GRTP1-AS1 - GRTP1 antisense RNA 1 ncRNA chr2-9054 chr2 200505420 200505630 + 11.4 0.000 intron (NM_001321550, intron 2 of 6) intron (NM_001321550, intron 2 of 6) 4543 NM_001321547 130535 Hs.605775 NM_152387 ENSG00000155729 KCTD18 6530404F10Rik potassium channel tetramerization domain containing 18 protein-coding chr6-930 chr6 44313254 44313464 + 11.4 0.000 promoter-TSS (NM_020745) promoter-TSS (NM_020745) -12 NM_020745 57505 Hs.158381 NM_020745 ENSG00000124608 AARS2 AARSL|COXPD8|LKENP|MT-ALARS|MTALARS alanyl-tRNA synthetase 2, mitochondrial protein-coding chr16-2860 chr16 86664264 86664474 + 11.4 0.000 Intergenic Intergenic 57590 NR_135181 101928614 Hs.399823 NR_135181 ENSG00000260026 LINC02189 - long intergenic non-protein coding RNA 2189 ncRNA chr2-3918 chr2 53672870 53673080 + 11.4 0.000 intron (NM_001201965, intron 8 of 8) Tigger13a|DNA|TcMar-Tigger -94808 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr7-7826 chr7 3583861 3584071 + 11.4 0.000 intron (NM_152744, intron 1 of 44) L2b|LINE|L2 282714 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr1-6150 chr1 173454317 173454527 + 11.4 0.000 intron (NR_125960, intron 1 of 1) intron (NR_125960, intron 1 of 1) 6940 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr21-348 chr21 26835435 26835645 + 11.4 0.000 TTS (NM_006988) TTS (NM_006988) 9869 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding chr18-2135 chr18 55251499 55251709 + 11.4 0.000 intron (NM_001348216, intron 8 of 12) intron (NM_001348216, intron 8 of 12) 51056 NM_001243236 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr19-4072 chr19 11398071 11398281 + 11.4 0.000 intron (NM_001035223, intron 16 of 18) intron (NM_001035223, intron 16 of 18) -13862 NR_033663 2057 Hs.631624 NM_000121 ENSG00000187266 EPOR EPO-R erythropoietin receptor protein-coding chr2-4780 chr2 33291398 33291608 + 11.4 0.000 intron (NM_206943, intron 19 of 33) intron (NM_206943, intron 19 of 33) -127013 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr18-1148 chr18 10715888 10716098 + 11.4 0.000 intron (NM_022068, intron 34 of 51) intron (NM_022068, intron 34 of 51) 43656 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr17-4133 chr17 82043107 82043317 + 11.4 0.000 Intergenic Intergenic 5294 NR_159948 113523640 Hs.562696 NR_159947 DCXR-DT - DCXR divergent transcript ncRNA chr5-3616 chr5 132264008 132264218 + 11.4 0.000 intron (NM_001131027, intron 2 of 5) intron (NM_001131027, intron 2 of 5) 6417 NM_003687 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr2-3315 chr2 132352648 132352858 + 11.4 0.000 promoter-TSS (NR_135203) promoter-TSS (NR_135203) 86 NR_135203 339742 Hs.98178 NR_135203 FAM201B - family with sequence similarity 201 member B ncRNA chr6-2455 chr6 23755434 23755644 + 11.4 0.000 Intergenic L1PA17|LINE|L1 -370676 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr2-3599 chr2 72828260 72828470 + 11.4 0.000 Intergenic Intergenic -2332 NM_001321729 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr2-1937 chr2 217921368 217921578 + 11.4 0.000 intron (NM_022648, intron 1 of 32) intron (NM_022648, intron 1 of 32) -1237 NM_001308023 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr8-3386 chr8 60111430 60111640 + 11.4 0.000 Intergenic Intergenic 169865 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr16-3081 chr16 65414402 65414612 + 11.4 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 161793 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr10-2844 chr10 45103097 45103307 + 11.4 0.000 intron (NR_024472, intron 8 of 8) intron (NR_024472, intron 8 of 8) 51394 NR_024472 100133308 Hs.434365 NR_024472 RSU1P2 - Ras suppressor protein 1 pseudogene 2 pseudo chr4-5195 chr4 160494119 160494329 + 11.4 0.000 Intergenic Intergenic -716440 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr16-2520 chr16 918105 918315 + 11.4 0.000 intron (NR_147885, intron 2 of 11) intron (NR_147885, intron 2 of 11) -2823 NR_110946 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr9-1488 chr9 129094227 129094437 + 11.4 0.000 TTS (NM_001346546) TTS (NM_001346546) 13221 NR_072983 57171 Hs.21701 NM_020438 ENSG00000167130 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding chr10-3869 chr10 36670870 36671080 + 11.4 0.000 Intergenic Intergenic -454882 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr15-3428 chr15 90463365 90463575 + 11.4 0.000 intron (NM_003870, intron 15 of 37) intron (NM_003870, intron 15 of 37) -66453 NM_022769 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr11-3888 chr11 101442186 101442396 + 11.4 0.000 Intergenic Intergenic 77614 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr6-5829 chr6 24096850 24097060 + 11.4 0.000 Intergenic Intergenic -29260 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr17-1307 chr17 62421461 62421671 + 11.4 0.000 Intergenic Intergenic -2319 NM_181725 339175 Hs.381204 NM_181725 ENSG00000087995 METTL2A METTL2 methyltransferase like 2A protein-coding chr12-6294 chr12 50466415 50466625 + 11.4 0.000 intron (NM_001330415, intron 12 of 15) AluJb|SINE|Alu 9949 NR_132753 106633800 NR_132753 SNORD133 ZL142|ZL42|ggn68 small nucleolar RNA, C/D box 133 snoRNA chr11-5211 chr11 13952857 13953067 + 11.4 0.000 Intergenic L2a|LINE|L2 -9761 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr11-1850 chr11 94791237 94791447 + 11.4 0.000 intron (NM_001301007, intron 1 of 11) intron (NM_001301007, intron 1 of 11) 22986 NM_001301007 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr8-5715 chr8 130337883 130338093 + 11.4 0.000 intron (NM_001362925, intron 3 of 29) MIRb|SINE|MIR -41455 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr12-1844 chr12 38310723 38310933 + 11.4 0.000 Intergenic L1MCc|LINE|L1 -5946 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr12-4170 chr12 89374186 89374396 + 11.4 0.000 Intergenic Intergenic -21790 NM_001946 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr2-2920 chr2 239937481 239937691 + 11.4 0.000 intron (NR_136158, intron 7 of 10) L1MB7|LINE|L1 5508 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr8-1812 chr8 118093834 118094044 + 11.4 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 17880 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr5-4611 chr5 31809258 31809468 + 11.4 0.000 intron (NM_178140, intron 2 of 24) intron (NM_178140, intron 2 of 24) 126796 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr10-2762 chr10 123246720 123246930 + 11.4 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 92423 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr18-1215 chr18 36706241 36706451 + 11.4 0.000 intron (NM_001281740, intron 17 of 28) intron (NM_001281740, intron 17 of 28) -42928 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr13-1839 chr13 93180634 93180844 + 11.4 0.000 Intergenic L1MCa|LINE|L1 -46068 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr1-1337 chr1 827455 827665 + 11.4 0.000 promoter-TSS (NR_024321) promoter-TSS (NR_024321) -31 NR_047521 643837 Hs.133183 NR_015368 ENSG00000228794 LINC01128 - long intergenic non-protein coding RNA 1128 ncRNA chr4-4887 chr4 117400207 117400417 + 11.4 0.000 Intergenic Intergenic -28086 NR_125757 103689918 Hs.582062 NR_125757 LINC01378 - long intergenic non-protein coding RNA 1378 ncRNA chr10-1915 chr10 132508052 132508262 + 11.4 0.000 TTS (NR_158224) TTS (NR_158224) 28766 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr8-5728 chr8 134235353 134235563 + 11.4 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 348962 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr4-4558 chr4 73859943 73860153 + 11.4 0.000 Intergenic Intergenic 6752 NM_002620 5197 Hs.72933 NM_002620 ENSG00000109272 PF4V1 CXCL4L1|CXCL4V1|PF4-ALT|PF4A|SCYB4V1 platelet factor 4 variant 1 protein-coding chr15-2141 chr15 74039169 74039379 + 11.4 0.000 intron (NM_033249, intron 6 of 6) intron (NM_033249, intron 6 of 6) 43276 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr9-1328 chr9 41074669 41074879 + 11.4 0.000 promoter-TSS (NR_002836) promoter-TSS (NR_002836) -149 NR_002836 595135 Hs.571593 NR_002836 ENSG00000277778 PGM5P2 - phosphoglucomutase 5 pseudogene 2 pseudo chr1-5559 chr1 241637306 241637516 + 11.4 0.000 intron (NM_014322, intron 1 of 3) intron (NM_014322, intron 1 of 3) -1481 NM_001821 1122 Hs.654545 NM_001821 ENSG00000203668 CHML REP2 CHM like Rab escort protein protein-coding chr17-1993 chr17 76697792 76698002 + 11.4 0.000 intron (NM_198530, intron 1 of 3) GA-rich|Low_complexity|Low_complexity -9010 NR_130928 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr16-1468 chr16 65774 65984 + 11.4 0.000 intron (NM_022450, intron 1 of 17) intron (NM_022450, intron 1 of 17) 6752 NM_022450 64285 Hs.744992 NM_022450 ENSG00000007384 RHBDF1 C16orf8|Dist1|EGFR-RS|gene-89|gene-90|hDist1 rhomboid 5 homolog 1 protein-coding chr2-8776 chr2 165373401 165373611 + 11.4 0.000 intron (NM_001040143, intron 22 of 27) intron (NM_001040143, intron 22 of 27) 79451 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr22-1816 chr22 35602294 35602504 + 11.4 0.000 Intergenic Intergenic 14930 NM_005368 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr18-1082 chr18 46174802 46175012 + 11.4 0.000 intron (NM_001008239, intron 1 of 3) CpG 873 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr7-5940 chr7 100083068 100083278 + 11.4 0.000 promoter-TSS (NM_001371217) promoter-TSS (NM_001371217) -596 NM_001278284 7551 Hs.435302 NM_017715 ENSG00000166526 ZNF3 A8-51|HF.12|KOX25|PP838|Zfp113 zinc finger protein 3 protein-coding chr5-3060 chr5 32202490 32202700 + 11.4 0.000 Intergenic Intergenic -28276 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr7-2946 chr7 150946540 150946750 + 11.4 0.000 intron (NM_000238, intron 14 of 14) intron (NM_000238, intron 14 of 14) 9159 NM_001204798 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chr12-2115 chr12 57583438 57583648 + 11.4 0.000 intron (NM_004984, intron 28 of 28) intron (NM_004984, intron 28 of 28) -7649 NM_001146260 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr6-627 chr6 40587595 40587805 + 11.4 0.000 promoter-TSS (NM_020737) promoter-TSS (NM_020737) -336 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr3-2188 chr3 3192529 3192739 + 11.4 0.000 Intergenic LTR50|LTR|ERVL -12917 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr16-2547 chr16 31366054 31366264 + 11.4 0.000 intron (NM_000887, intron 14 of 29) Tigger1|DNA|TcMar-Tigger 10983 NM_000887 3687 Hs.248472 NM_000887 ENSG00000140678 ITGAX CD11C|SLEB6 integrin subunit alpha X protein-coding chr10-2312 chr10 44126144 44126354 + 11.4 0.000 Intergenic Intergenic -166501 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr22-874 chr22 39534707 39534917 + 11.4 0.000 Intergenic CpG -2064 NR_130151 91582 Hs.526933 NM_194326 ENSG00000187051 RPS19BP1 AROS|S19BP ribosomal protein S19 binding protein 1 protein-coding chrX-388 chrX 72042107 72042317 + 11.4 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -2197 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr11-2183 chr11 9041838 9042048 + 11.4 0.000 intron (NM_001367977, intron 16 of 22) L2a|LINE|L2 -37942 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chr9-3562 chr9 69215915 69216125 + 11.4 0.000 intron (NM_001369870, intron 3 of 23) intron (NM_001369870, intron 3 of 23) 10865 NM_001369875 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr7-3758 chr7 77202623 77202833 + 11.4 0.000 intron (NM_020879, intron 2 of 18) intron (NM_020879, intron 2 of 18) -2909 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding chr20-983 chr20 50321301 50321511 + 11.4 0.000 promoter-TSS (NR_109950) promoter-TSS (NR_109950) -64 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr17-4357 chr17 9371073 9371283 + 11.4 0.000 intron (NM_004853, intron 7 of 7) intron (NM_004853, intron 7 of 7) -192060 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr3-4863 chr3 161800843 161801053 + 11.4 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 304140 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr12-2199 chr12 25767799 25768009 + 11.4 0.000 Intergenic Intergenic 106175 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr1-16155 chr1 205840810 205841020 + 11.4 0.000 intron (NM_152491, intron 9 of 12) intron (NM_152491, intron 9 of 12) 9217 NR_135186 148811 Hs.177744 NM_152491 ENSG00000162877 PM20D1 Cps1 peptidase M20 domain containing 1 protein-coding chr10-4578 chr10 109206077 109206287 + 11.4 0.000 Intergenic MER77B|LTR|ERVL 717064 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr11-3136 chr11 45931916 45932126 + 11.4 0.000 non-coding (NR_147890, exon 19 of 19) non-coding (NR_147890, exon 19 of 19) 9365 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr2-3387 chr2 24122558 24122768 + 11.4 0.000 promoter-TSS (NM_001145710) promoter-TSS (NM_001145710) 671 NM_199346 375189 Hs.442718 NM_199346 ENSG00000176732 PFN4 - profilin family member 4 protein-coding chr4-2251 chr4 161725083 161725293 + 11.4 0.000 intron (NM_001128428, intron 6 of 14) AluSc|SINE|Alu -297545 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr3-1141 chr3 45180168 45180378 + 11.4 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -33851 NM_178181 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr3-10690 chr3 151227919 151228129 + 11.4 0.000 intron (NM_014879, intron 1 of 2) intron (NM_014879, intron 1 of 2) 20967 NM_001081455 9934 Hs.2465 NM_014879 ENSG00000174944 P2RY14 BPR105|GPR105|P2Y14 purinergic receptor P2Y14 protein-coding chrX-813 chrX 77590880 77591090 + 11.4 0.000 intron (NM_000489, intron 26 of 34) intron (NM_000489, intron 26 of 34) 143596 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr11-3389 chr11 130847589 130847799 + 11.4 0.000 intron (NR_125383, intron 3 of 5) MER44C|DNA|TcMar-Tigger 14416 NR_125383 100507431 Hs.375101 NR_125383 LINC02551 - long intergenic non-protein coding RNA 2551 ncRNA chr17-4257 chr17 58483574 58483784 + 11.4 0.000 intron (NM_001080439, intron 1 of 5) intron (NM_001080439, intron 1 of 5) 4729 NM_001080439 124535 Hs.380061 NM_001080439 ENSG00000176160 HSF5 HSF 5|HSTF 5 heat shock transcription factor 5 protein-coding chr11-5568 chr11 102502807 102503017 + 11.4 0.000 Intergenic L1PA8|LINE|L1 27835 NM_002423 4316 Hs.2256 NM_002423 ENSG00000137673 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 protein-coding chr12-2946 chr12 100234605 100234815 + 11.4 0.000 intron (NR_135073, intron 9 of 10) intron (NR_135073, intron 9 of 10) 32369 NM_001319311 120863 Hs.653118 NM_152317 ENSG00000166153 DEPDC4 DEP.4 DEP domain containing 4 protein-coding chr7-2492 chr7 17142427 17142637 + 11.4 0.000 Intergenic Intergenic -156120 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr2-5667 chr2 200615335 200615545 + 11.4 0.000 intron (NM_001159, intron 15 of 34) intron (NM_001159, intron 15 of 34) 29426 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr2-4613 chr2 138036043 138036253 + 11.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -65736 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr11-3028 chr11 1503880 1504090 + 11.4 0.000 Intergenic Intergenic -17206 NM_001172223 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr1-5232 chr1 199461059 199461269 + 11.4 0.000 Intergenic L1MEc|LINE|L1 312566 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr3-10346 chr3 127574655 127574865 + 11.4 0.000 TTS (NR_106883) TTS (NR_106883) 571 NR_106883 102466199 NR_106883 ENSG00000275067 MIR6825 hsa-mir-6825 microRNA 6825 ncRNA chr3-908 chr3 190862782 190862992 + 11.4 0.000 promoter-TSS (NM_001146686) promoter-TSS (NM_001146686) -193 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr21-612 chr21 33018778 33018988 + 11.4 0.000 Intergenic Intergenic -7052 NM_005806 10215 Hs.176977 NM_005806 ENSG00000205927 OLIG2 BHLHB1|OLIGO2|PRKCBP2|RACK17|bHLHe19 oligodendrocyte transcription factor 2 protein-coding chr19-1735 chr19 920354 920564 + 11.4 0.000 exon (NM_032551, exon 5 of 5) exon (NM_032551, exon 5 of 5) 3126 NM_032551 84634 Hs.208229 NM_032551 ENSG00000116014 KISS1R AXOR12|CPPB1|GPR54|HH8|HOT7T175|KISS-1R KISS1 receptor protein-coding chr2-2064 chr2 196592952 196593162 + 11.4 0.000 promoter-TSS (NM_020760) promoter-TSS (NM_020760) -74 NM_020760 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr11-2075 chr11 84316787 84316997 + 11.4 0.000 exon (NM_001206769, exon 1 of 22) exon (NM_001206769, exon 1 of 22) 447 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr11-5226 chr11 17639109 17639319 + 11.4 0.000 intron (NM_001277269, intron 47 of 54) intron (NM_001277269, intron 47 of 54) 57725 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr16-4358 chr16 46633659 46633869 + 11.4 0.000 Intergenic MER52C|LTR|ERV1 -12385 NM_001324319 79801 Hs.123253 NM_024745 ENSG00000171241 SHCBP1 PAL SHC binding and spindle associated 1 protein-coding chr15-1418 chr15 58182742 58182952 + 11.4 0.000 intron (NM_020980, intron 5 of 5) intron (NM_020980, intron 5 of 5) 44466 NM_001320635 366 Hs.104624 NM_020980 ENSG00000103569 AQP9 AQP-9|HsT17287|SSC1|T17287 aquaporin 9 protein-coding chr4-5877 chr4 127461821 127462031 + 11.4 0.000 Intergenic L1PA7|LINE|L1 -171031 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr12-2368 chr12 15662598 15662808 + 11.4 0.000 intron (NM_004447, intron 8 of 20) MamSINE1|SINE|tRNA-RTE 116092 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr7-2293 chr7 70695890 70696100 + 11.4 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -436149 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr18-854 chr18 25689934 25690144 + 11.4 0.000 Intergenic MER53|DNA|hAT -337873 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr16-1186 chr16 1992301 1992511 + 11.4 0.000 intron (NM_004209, intron 2 of 3) CpG-9054 2436 NM_004209 9143 Hs.435277 NM_004209 ENSG00000127561 SYNGR3 - synaptogyrin 3 protein-coding chr19-2471 chr19 2401399 2401609 + 11.4 0.000 intron (NM_182973, intron 3 of 16) intron (NM_182973, intron 3 of 16) 11733 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr11-2745 chr11 43937982 43938192 + 11.4 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -4550 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr13-1018 chr13 40189633 40189843 + 11.4 0.000 TTS (NR_046870) TTS (NR_046870) 7929 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr16-2416 chr16 72536867 72537077 + 11.4 0.000 intron (NR_159372, intron 3 of 7) intron (NR_159372, intron 3 of 7) 127998 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr3-3137 chr3 159646241 159646451 + 11.4 0.000 intron (NM_001197108, intron 1 of 6) LTR16B1|LTR|ERVL 122266 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr12-1055 chr12 106251610 106251820 + 11.4 0.000 Intergenic Intergenic -3695 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr14-1879 chr14 89508924 89509134 + 11.4 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) -67187 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA chr22-835 chr22 40512627 40512837 + 11.4 0.000 intron (NM_020831, intron 3 of 14) intron (NM_020831, intron 3 of 14) -9068 NR_109965 101927257 Hs.662725 NR_109965 ENSG00000232564 MRTFA-AS1 - MRTFA antisense RNA 1 ncRNA chr5-3783 chr5 72214166 72214376 + 11.4 0.000 Intergenic Intergenic 34484 NM_001324255 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr14-3487 chr14 102450775 102450985 + 11.4 0.000 intron (NM_014844, intron 15 of 19) intron (NM_014844, intron 15 of 19) 58896 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr2-10913 chr2 72263800 72264010 + 11.4 0.000 intron (NR_135773, intron 19 of 21) intron (NR_135773, intron 19 of 21) -116043 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr2-1995 chr2 47065919 47066129 + 11.4 0.000 intron (NM_001288951, intron 20 of 20) intron (NM_001288951, intron 20 of 20) 89284 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr6-980 chr6 132085038 132085248 + 11.4 0.000 Intergenic Intergenic 30120 NR_039673 100616191 NR_039673 ENSG00000265669 MIR548AJ1 - microRNA 548aj-1 ncRNA chr1-15158 chr1 106789228 106789438 + 11.4 0.000 Intergenic Intergenic -28906 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr19-3473 chr19 35088646 35088856 + 11.4 0.000 intron (NR_024561, intron 1 of 3) intron (NR_024561, intron 1 of 3) 17520 NR_024561 100128675 Hs.633989 NR_024561 ENSG00000227392 HPN-AS1 - HPN antisense RNA 1 ncRNA chr14-2438 chr14 73993554 73993764 + 11.4 0.000 intron (NM_001249, intron 3 of 15) intron (NM_001249, intron 3 of 15) 25629 NM_001321988 957 Hs.655070 NM_001249 ENSG00000187097 ENTPD5 CD39L4|NTPDase-5|PCPH ectonucleoside triphosphate diphosphohydrolase 5 (inactive) protein-coding chr15-1162 chr15 75361003 75361213 + 11.4 0.000 exon (NM_006715, exon 12 of 26) exon (NM_006715, exon 12 of 26) -7423 NR_030360 693216 NR_030360 ENSG00000284343 MIR631 MIRN631|hsa-mir-631 microRNA 631 ncRNA chr11-2987 chr11 107770872 107771082 + 11.4 0.000 Intergenic Intergenic -58921 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr3-2374 chr3 171753803 171754013 + 11.4 0.000 intron (NM_002662, intron 1 of 26) L2c|LINE|L2 56575 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr2-2974 chr2 35955253 35955463 + 11.4 0.000 Intergenic Intergenic 400212 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr5-1839 chr5 106331561 106331771 + 11.4 0.000 Intergenic L1MB2|LINE|L1 679348 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr5-2495 chr5 149799017 149799227 + 11.4 0.000 intron (NM_001172699, intron 1 of 10) intron (NM_001172699, intron 1 of 10) 27182 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr14-1509 chr14 52268472 52268682 + 11.4 0.000 exon (NM_000953, exon 1 of 2) exon (NM_000953, exon 1 of 2) 879 NM_001281469 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr10-2601 chr10 77360122 77360332 + 11.4 0.000 intron (NR_126365, intron 3 of 5) intron (NR_126365, intron 3 of 5) 9355 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr2-2671 chr2 226963650 226963860 + 11.4 0.000 intron (NM_001349069, intron 8 of 8) L2|LINE|L2 127701 NM_032276 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding chr12-1887 chr12 57604577 57604787 + 11.4 0.000 promoter-TSS (NM_178502) promoter-TSS (NM_178502) -142 NM_178502 196403 Hs.32374 NM_178502 ENSG00000178498 DTX3 RNF154|deltex3 deltex E3 ubiquitin ligase 3 protein-coding chr3-6707 chr3 133937943 133938153 + 11.4 0.000 intron (NM_005630, intron 12 of 13) intron (NM_005630, intron 12 of 13) -8236 NR_161373 80111 Hs.287691 NM_025041 ENSG00000174640 C3orf36 - chromosome 3 open reading frame 36 ncRNA chr7-1706 chr7 1360033 1360243 + 11.4 0.000 Intergenic Intergenic 99332 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr2-7304 chr2 239950639 239950849 + 11.4 0.000 intron (NR_136158, intron 7 of 10) intron (NR_136158, intron 7 of 10) -7650 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr5-3978 chr5 13785326 13785536 + 11.4 0.000 intron (NM_001369, intron 52 of 78) intron (NM_001369, intron 52 of 78) 159049 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr7-2236 chr7 134692077 134692287 + 11.4 0.000 Intergenic Intergenic 45329 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr10-1899 chr10 119238630 119238840 + 11.4 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 31164 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr8-2251 chr8 61657201 61657411 + 11.4 0.000 intron (NM_032468, intron 4 of 14) Tigger3a|DNA|TcMar-Tigger 32505 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr9-3477 chr9 12708676 12708886 + 11.4 0.000 intron (NM_000550, intron 7 of 7) MIRc|SINE|MIR 15396 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr2-6236 chr2 32419642 32419852 + 11.4 0.000 intron (NM_016252, intron 10 of 73) intron (NM_016252, intron 10 of 73) 62719 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr10-1600 chr10 43156704 43156914 + 11.4 0.000 intron (NM_018590, intron 2 of 7) MER1B|DNA|hAT-Charlie 1912 NM_001319656 55454 Hs.657569 NM_018590 ENSG00000169826 CSGALNACT2 CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding chr13-1192 chr13 48127037 48127247 + 11.4 0.000 Intergenic Intergenic -32001 NM_001270629 29079 Hs.181112 NM_014166 ENSG00000136146 MED4 ARC36|DRIP36|HSPC126|TRAP36|VDRIP mediator complex subunit 4 protein-coding chr11-7833 chr11 112832623 112832833 + 11.4 0.000 Intergenic MIR3|SINE|MIR -128692 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chrX-663 chrX 133698441 133698651 + 11.4 0.000 intron (NM_001164619, intron 3 of 6) intron (NM_001164619, intron 3 of 6) -198897 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr17-2343 chr17 62870075 62870285 + 11.4 0.000 Intergenic Intergenic 61678 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 MARCH10-DT - MARCH10 divergent transcript ncRNA chr10-5533 chr10 85514062 85514272 + 11.4 0.000 Intergenic L1MEi|LINE|L1 -63564 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr5-1957 chr5 68534757 68534967 + 11.4 0.000 Intergenic Intergenic 242285 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr22-1078 chr22 25059399 25059609 + 11.4 0.000 intron (NM_001145206, intron 4 of 10) intron (NM_001145206, intron 4 of 10) 31530 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding chr10-5937 chr10 121533622 121533832 + 11.4 0.000 intron (NR_073009, intron 4 of 16) intron (NR_073009, intron 4 of 16) -2413 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr4-5929 chr4 150703207 150703417 + 11.4 0.000 intron (NM_001367550, intron 36 of 56) intron (NM_001367550, intron 36 of 56) 121161 NM_006439 10586 Hs.584852 NM_006439 ENSG00000181541 MAB21L2 MCOPS14|MCSKS14 mab-21 like 2 protein-coding chr10-1960 chr10 25080971 25081181 + 11.4 0.000 Intergenic Intergenic -18797 NM_001270383 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr1-9215 chr1 22509907 22510117 + 11.4 0.000 intron (NM_001083621, intron 10 of 18) intron (NM_001083621, intron 10 of 18) -53477 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr1-4123 chr1 246800756 246800966 + 11.4 0.000 Intergenic Intergenic 11244 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr6-1601 chr6 38639043 38639253 + 11.4 0.000 intron (NM_052893, intron 1 of 11) intron (NM_052893, intron 1 of 11) 781 NM_052893 114781 Hs.603858 NM_052893 ENSG00000183826 BTBD9 dJ322I12.1 BTB domain containing 9 protein-coding chr7-1659 chr7 80330454 80330664 + 11.4 0.000 Intergenic Intergenic 43880 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chr2-7927 chr2 59455512 59455722 + 11.4 0.000 Intergenic Intergenic 237909 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr19-3738 chr19 45359436 45359646 + 11.4 0.000 intron (NM_001130867, intron 11 of 11) intron (NM_001130867, intron 11 of 11) 11046 NM_000400 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2, TFIIH core complex helicase subunit protein-coding chr5-2697 chr5 77430823 77431033 + 11.4 0.000 TTS (NM_018268) TTS (NM_018268) 61388 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr13-2340 chr13 34579485 34579695 + 11.4 0.000 intron (NR_047036, intron 1 of 2) MLT1C|LTR|ERVL-MaLR 61095 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr19-2761 chr19 41934444 41934654 + 11.4 0.000 Intergenic MSR1|Satellite|Satellite 5729 NR_135626 100505585 NR_135626 ENSG00000076928 LOC100505585 - uncharacterized LOC100505585 ncRNA chr3-3058 chr3 127360587 127360797 + 11.4 0.000 intron (NR_110147, intron 1 of 4) intron (NR_110147, intron 1 of 4) 29978 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr4-926 chr4 8440482 8440692 + 11.4 0.000 promoter-TSS (NM_001350233) promoter-TSS (NM_001350233) 136 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr16-5047 chr16 65607202 65607412 + 11.4 0.000 Intergenic Intergenic -31007 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr11-3176 chr11 63088405 63088615 + 11.4 0.000 intron (NM_001136506, intron 6 of 9) L1PA13|LINE|L1 55711 NM_173586 283238 Hs.375139 NM_173586 ENSG00000197658 SLC22A24 NET46 solute carrier family 22 member 24 protein-coding chr6-1731 chr6 39083142 39083352 + 11.4 0.000 intron (NR_136563, intron 12 of 13) intron (NR_136563, intron 12 of 13) 8933 NR_162114 113218508 NR_162114 MIR9983 - microRNA 9983 ncRNA chr21-647 chr21 27171788 27171998 + 11.4 0.000 Intergenic Intergenic -204805 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr7-8016 chr7 18019595 18019805 + 11.4 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR 8146 NM_175886 221823 Hs.169284 NM_175886 ENSG00000229937 PRPS1L1 PRPS1|PRPS3|PRPSL|PRS-III phosphoribosyl pyrophosphate synthetase 1 like 1 protein-coding chr16-2832 chr16 75043446 75043656 + 11.4 0.000 intron (NM_032268, intron 1 of 4) L2c|LINE|L2 44527 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr2-5762 chr2 221750386 221750596 + 11.4 0.000 Intergenic Intergenic -176289 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr5-1583 chr5 178627162 178627372 + 11.4 0.000 promoter-TSS (NM_020666) promoter-TSS (NM_020666) -217 NM_020666 57396 Hs.406557 NM_020666 ENSG00000113240 CLK4 - CDC like kinase 4 protein-coding chr1-6892 chr1 119101717 119101927 + 11.4 0.000 intron (NM_015836, intron 1 of 5) intron (NM_015836, intron 1 of 5) -38574 NR_125977 101929147 Hs.697821 NR_125974 ENSG00000231365 WARS2-AS1 - WARS2 antisense RNA 1 ncRNA chr15-2698 chr15 85527878 85528088 + 11.4 0.000 intron (NM_007200, intron 3 of 36) intron (NM_007200, intron 3 of 36) -91967 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr7-2689 chr7 22023172 22023382 + 11.4 0.000 Intergenic Intergenic -77378 NM_001127370 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr12-1214 chr12 132391803 132392013 + 11.4 0.000 Intergenic CpG 62058 NR_120467 101928416 NR_120467 ENSG00000255916 LOC101928416 - uncharacterized LOC101928416 ncRNA chr20-1833 chr20 516906 517116 + 11.4 0.000 intron (NM_001362771, intron 1 of 13) intron (NM_001362771, intron 1 of 13) 26779 NM_001362771 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|Cka1|Cka2|OCNDS casein kinase 2 alpha 1 protein-coding chr18-628 chr18 12159532 12159742 + 11.4 0.000 Intergenic MER117|DNA|hAT-Charlie -41142 NR_049896 497259 Hs.451609 NR_049896 C18orf61 - uncharacterized LOC497259 ncRNA chr11-5796 chr11 5948007 5948217 + 11.4 0.000 exon (NM_001003443, exon 1 of 1) exon (NM_001003443, exon 1 of 1) 765 NM_001003443 390083 Hs.553741 NM_001003443 ENSG00000184478 OR56A3 OR56A2P|OR56A3P|OR56A6 olfactory receptor family 56 subfamily A member 3 protein-coding chr2-7500 chr2 18900543 18900753 + 11.4 0.000 Intergenic MIR3|SINE|MIR 126323 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr1-10691 chr1 188128449 188128659 + 11.4 0.000 Intergenic L1PA16|LINE|L1 684926 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr11-9224 chr11 40380422 40380632 + 11.4 0.000 intron (NM_020929, intron 2 of 4) intron (NM_020929, intron 2 of 4) -87397 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chrX-786 chrX 46965231 46965441 + 11.4 0.000 intron (NM_014735, intron 1 of 10) L1MEi|LINE|L1 52915 NM_014735 9767 Hs.371977 NM_014735 ENSG00000102221 JADE3 JADE-3|PHF16 jade family PHD finger 3 protein-coding chrX-870 chrX 153334295 153334505 + 11.4 0.000 intron (NM_001080485, intron 1 of 4) CpG 245 NM_001080485 10838 Hs.348963 NM_020636 ENSG00000063587 ZNF275 - zinc finger protein 275 protein-coding chr20-3950 chr20 33979322 33979532 + 11.4 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -14484 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chrX-591 chrX 116873819 116874029 + 11.4 0.000 Intergenic Intergenic -56064 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr1-12485 chr1 19619540 19619750 + 11.4 0.000 intron (NR_033758, intron 2 of 4) intron (NR_033758, intron 2 of 4) 11838 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo chr8-4450 chr8 114671327 114671537 + 11.4 0.000 Intergenic Intergenic 996581 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr4-8086 chr4 123606345 123606555 + 11.4 0.000 Intergenic L1PA11|LINE|L1 -43541 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr2-6959 chr2 121390942 121391152 + 11.4 0.000 intron (NM_015282, intron 29 of 38) intron (NM_015282, intron 29 of 38) -105845 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr1-3372 chr1 154199062 154199272 + 11.4 0.000 TTS (NM_001010979) TTS (NM_001010979) -5424 NR_030600 100126346 NR_030600 ENSG00000215938 MIR190B MIRN190B|mir-190b microRNA 190b ncRNA chr1-8813 chr1 2159622 2159832 + 11.4 0.000 intron (NR_146911, intron 7 of 15) intron (NR_146911, intron 7 of 15) 24148 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr17-2745 chr17 79286098 79286308 + 11.4 0.000 intron (NM_001082575, intron 3 of 14) intron (NM_001082575, intron 3 of 14) 211266 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr15-2119 chr15 70589324 70589534 + 11.4 0.000 Intergenic LTR85a|LTR|Gypsy? -2823 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA chr3-11167 chr3 190443220 190443430 + 11.4 0.000 intron (NM_207316, intron 2 of 4) intron (NM_207316, intron 2 of 4) 6551 NM_207316 131920 Hs.335321 NM_207316 ENSG00000198398 TMEM207 UNQ846 transmembrane protein 207 protein-coding chr6-3671 chr6 150083510 150083720 + 11.4 0.000 Intergenic Intergenic -14494 NM_024518 79465 Hs.15422 NM_024518 ENSG00000131019 ULBP3 N2DL-3|NKG2DL3|RAET1N UL16 binding protein 3 protein-coding chr8-2082 chr8 127891391 127891601 + 11.4 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 57227 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr12-2043 chr12 81078148 81078358 + 11.4 0.000 exon (NM_001330242, exon 1 of 16) exon (NM_001330242, exon 1 of 16) 174 NM_024560 79611 Hs.259559 NM_024560 ENSG00000111058 ACSS3 - acyl-CoA synthetase short chain family member 3 protein-coding chr9-5897 chr9 132414996 132415206 + 11.4 0.000 intron (NM_001282957, intron 1 of 5) intron (NM_001282957, intron 1 of 5) 4890 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr13-1827 chr13 73547409 73547619 + 11.4 0.000 Intergenic Intergenic -16730 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr11-5784 chr11 5291444 5291654 + 11.4 0.000 Intergenic Intergenic 10397 NM_033179 79339 Hs.679499 NM_033179 ENSG00000183251 OR51B4 HOR5'Beta1 olfactory receptor family 51 subfamily B member 4 protein-coding chr8-1619 chr8 37930369 37930579 + 11.4 0.000 Intergenic Intergenic 9650 NM_152413 137362 Hs.380740 NM_152413 ENSG00000169154 GOT1L1 - glutamic-oxaloacetic transaminase 1 like 1 protein-coding chr9-1870 chr9 89038463 89038673 + 11.4 0.000 intron (NM_016848, intron 10 of 11) intron (NM_016848, intron 10 of 11) 47100 NM_005226 1903 Hs.585118 NM_005226 ENSG00000213694 S1PR3 EDG-3|EDG3|LPB3|S1P3 sphingosine-1-phosphate receptor 3 protein-coding chr15-2392 chr15 59850275 59850485 + 11.4 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger -153931 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr16-2070 chr16 84966648 84966858 + 11.4 0.000 Intergenic Intergenic 44782 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr11-4525 chr11 118058297 118058507 + 11.4 0.000 intron (NM_001354434, intron 2 of 5) intron (NM_001354434, intron 2 of 5) -18610 NR_110734 56649 Hs.161985 NM_019894 ENSG00000137648 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane serine protease 4 protein-coding chr2-3306 chr2 108362475 108362685 + 11.4 0.000 Intergenic L1M3b|LINE|L1 -15374 NR_135779 27233 Hs.312644 NM_006588 ENSG00000198075 SULT1C4 SULT1C|SULT1C2 sulfotransferase family 1C member 4 protein-coding chr16-1623 chr16 113539 113749 + 11.4 0.000 intron (NM_001039476, intron 2 of 10) intron (NM_001039476, intron 2 of 10) 25029 NM_001077350 8131 Hs.19699 NM_012075 ENSG00000103148 NPRL3 C16orf35|CGTHBA|FFEVF3|HS-40|MARE|NPR3|RMD11 NPR3 like, GATOR1 complex subunit protein-coding chr8-3341 chr8 38894348 38894558 + 11.4 0.000 Intergenic Intergenic -6893 NM_021623 59339 Hs.369123 NM_021623 ENSG00000169499 PLEKHA2 TAPP2 pleckstrin homology domain containing A2 protein-coding chr5-3317 chr5 127628187 127628397 + 11.4 0.000 Intergenic Intergenic -20729 NM_001048252 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding chr21-500 chr21 28715160 28715370 + 11.4 0.000 Intergenic L1PA16|LINE|L1 170102 NM_013240 29104 Hs.163846 NM_013240 ENSG00000156239 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P N-6 adenine-specific DNA methyltransferase 1 protein-coding chr14-897 chr14 54503507 54503717 + 11.4 0.000 Intergenic MER20|DNA|hAT-Charlie -6294 NM_006568 10668 Hs.59106 NM_006568 ENSG00000100532 CGRRF1 CGR19|RNF197 cell growth regulator with ring finger domain 1 protein-coding chr10-2260 chr10 114807125 114807335 + 11.4 0.000 Intergenic ERVL-E-int|LTR|ERVL -14550 NM_001135051 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding chr20-1218 chr20 18922646 18922856 + 11.4 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -92548 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr1-5285 chr1 212414121 212414331 + 11.4 0.000 intron (NM_001198862, intron 1 of 8) intron (NM_001198862, intron 1 of 8) 660 NM_018252 55248 Hs.445386 NM_018252 ENSG00000065600 PACC1 C1orf75|PAC|TMEM206 proton activated chloride channel 1 protein-coding chr20-2635 chr20 42922514 42922724 + 11.4 0.000 intron (NM_133170, intron 1 of 31) LTR33|LTR|ERVL -46124 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA chr11-3843 chr11 69524008 69524218 + 11.4 0.000 Intergenic MIRc|SINE|MIR 38552 NR_120545 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr19-3362 chr19 11019708 11019918 + 11.4 0.000 intron (NM_001128845, intron 17 of 32) intron (NM_001128845, intron 17 of 32) 35661 NM_001128848 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr4-1767 chr4 188976712 188976922 + 11.4 0.000 Intergenic Intergenic 200160 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr21-501 chr21 28805980 28806190 + 11.4 0.000 Intergenic Intergenic 79282 NM_013240 29104 Hs.163846 NM_013240 ENSG00000156239 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P N-6 adenine-specific DNA methyltransferase 1 protein-coding chr16-4235 chr16 19360585 19360795 + 11.4 0.000 Intergenic AluJr|SINE|Alu -49849 NM_001308161 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr2-11696 chr2 9336932 9337142 + 11.4 0.000 intron (NM_003887, intron 9 of 27) intron (NM_003887, intron 9 of 27) 85554 NR_134951 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr8-1760 chr8 41284846 41285056 + 11.4 0.000 intron (NM_003012, intron 2 of 2) intron (NM_003012, intron 2 of 2) -13808 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr15-1193 chr15 41408484 41408694 + 11.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -6093 NR_045620 51103 Hs.106529 NM_016013 ENSG00000137806 NDUFAF1 CGI-65|CGI65|CIA30|MC1DN11 NADH:ubiquinone oxidoreductase complex assembly factor 1 protein-coding chr2-7139 chr2 193679691 193679901 + 11.4 0.000 Intergenic Intergenic -664473 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr13-1028 chr13 52038398 52038608 + 11.4 0.000 intron (NM_001365552, intron 23 of 23) L2|LINE|L2 13812 NM_021645 9724 Hs.512963 NM_021645 ENSG00000253797 UTP14C 2700066J21Rik|KIAA0266|UTP14B UTP14C small subunit processome component protein-coding chr13-1156 chr13 33808538 33808748 + 11.4 0.000 Intergenic Intergenic -9426 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr2-8707 chr2 153607283 153607493 + 11.4 0.000 Intergenic Intergenic -128626 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr11-1662 chr11 6319205 6319415 + 11.4 0.000 exon (NM_145040, exon 2 of 2) exon (NM_145040, exon 2 of 2) 1191 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr7-2943 chr7 148686029 148686239 + 11.4 0.000 Intergenic Intergenic -11622 NM_001370660 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr2-2721 chr2 96321419 96321629 + 11.4 0.000 Intergenic CpG -3800 NM_001008949 150771 Hs.65009 NM_178495 ENSG00000198885 ITPRIPL1 KIAA1754L ITPRIP like 1 protein-coding chr16-4582 chr16 67540064 67540274 + 11.4 0.000 exon (NM_001193524, exon 7 of 22) exon (NM_001193524, exon 7 of 22) 2707 NM_001193524 79567 Hs.152717 NM_024519 ENSG00000039523 RIPOR1 FAM65A RHO family interacting cell polarization regulator 1 protein-coding chr8-3030 chr8 130440859 130441069 + 11.4 0.000 intron (NM_001362925, intron 1 of 29) L2b|LINE|L2 2696 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr5-1502 chr5 132755077 132755287 + 11.4 0.000 TTS (NM_001287253) TTS (NM_001287253) 7737 NM_001287252 645121 Hs.522057 NM_001039780 ENSG00000205089 CCNI2 - cyclin I family member 2 protein-coding chr1-2077 chr1 40315297 40315507 + 11.4 0.000 intron (NM_001852, intron 2 of 31) CpG 1884 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr12-2356 chr12 9711752 9711962 + 11.4 0.000 Intergenic L2|LINE|L2 21442 NM_001267701 160365 Hs.560087 NM_172004 ENSG00000184293 CLECL1 DCAL-1|DCAL1 C-type lectin like 1 protein-coding chr5-3469 chr5 169758996 169759206 + 11.4 0.000 intron (NR_156756, intron 23 of 52) intron (NR_156756, intron 23 of 52) 121826 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr1-7335 chr1 5584440 5584650 + 11.4 0.000 Intergenic MSTA|LTR|ERVL-MaLR 278196 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr14-2362 chr14 30608922 30609132 + 11.4 0.000 intron (NM_017769, intron 12 of 14) MIRb|SINE|MIR -13227 NM_001283031 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr4-2296 chr4 28090086 28090296 + 11.4 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -729391 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr1-4455 chr1 3453171 3453381 + 11.4 0.000 Intergenic Intergenic -1389 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr10-1667 chr10 119528908 119529118 + 11.4 0.000 intron (NM_001005339, intron 1 of 4) intron (NM_001005339, intron 1 of 4) 7520 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr18-1417 chr18 8455352 8455562 + 11.4 0.000 Intergenic Intergenic -88423 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr3-1421 chr3 184344571 184344781 + 11.4 0.000 exon (NM_001366134, exon 7 of 7) exon (NM_001366134, exon 7 of 7) 5843 NM_001366133 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr19-2634 chr19 5081883 5082093 + 11.4 0.000 intron (NM_001370094, intron 8 of 10) intron (NM_001370094, intron 8 of 10) 112875 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr9-1413 chr9 123396230 123396440 + 11.4 0.000 intron (NM_001352965, intron 18 of 20) intron (NM_001352965, intron 18 of 20) 6268 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chrX-1400 chrX 10218572 10218782 + 11.4 0.000 intron (NM_001830, intron 11 of 12) intron (NM_001830, intron 11 of 12) 61702 NM_001830 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chr7-1370 chr7 107661463 107661673 + 11.4 0.000 intron (NM_000441, intron 1 of 20) CpG 230 NR_028137 286002 Hs.512611 NR_028137 SLC26A4-AS1 - SLC26A4 antisense RNA 1 ncRNA chr1-2446 chr1 29459686 29459896 + 11.4 0.000 Intergenic Intergenic -109677 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr6-3225 chr6 141169462 141169672 + 11.4 0.000 Intergenic Intergenic 485753 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr9-2175 chr9 130354298 130354508 + 11.4 0.000 intron (NM_001291815, intron 31 of 97) intron (NM_001291815, intron 31 of 97) 88643 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr8-1959 chr8 60027313 60027523 + 11.4 0.000 Intergenic MIRb|SINE|MIR 253982 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr22-2790 chr22 42314730 42314940 + 11.4 0.000 Intergenic Intergenic -30908 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr1-8614 chr1 193479109 193479319 + 11.4 0.000 Intergenic LTR06|LTR|ERV1 174469 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr9-2447 chr9 7109067 7109277 + 11.4 0.000 intron (NR_148679, intron 19 of 22) LTR86A1|LTR|ERVL 351822 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr6-2175 chr6 33529517 33529727 + 11.4 0.000 Intergenic AluJb|SINE|Alu 50654 NM_001188 578 Hs.485139 NM_001188 ENSG00000030110 BAK1 BAK|BAK-LIKE|BCL2L7|CDN1 BCL2 antagonist/killer 1 protein-coding chr6-337 chr6 109483178 109483388 + 11.4 0.000 promoter-TSS (NM_014797) promoter-TSS (NM_014797) -46 NM_014797 9841 Hs.409876 NM_014797 ENSG00000112365 ZBTB24 BIF1|ICF2|PATZ2|ZNF450 zinc finger and BTB domain containing 24 protein-coding chr11-10114 chr11 87559713 87559923 + 11.4 0.000 Intergenic LTR17|LTR|ERV1 159593 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr7-6549 chr7 47914904 47915114 + 11.4 0.000 intron (NM_138295, intron 8 of 56) L1M2|LINE|L1 33482 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr2-5748 chr2 219099361 219099571 + 11.4 0.000 intron (NM_024782, intron 5 of 7) L2a|LINE|L2 -38545 NM_002181 3549 Hs.654504 NM_002181 ENSG00000163501 IHH BDA1|HHG2 Indian hedgehog signaling molecule protein-coding chr12-1706 chr12 2765463 2765673 + 11.4 0.000 intron (NR_146317, intron 3 of 3) intron (NR_146317, intron 3 of 3) -29402 NM_002014 2288 Hs.524183 NM_002014 ENSG00000004478 FKBP4 FKBP51|FKBP52|FKBP59|HBI|Hsp56|PPIase|p52 FKBP prolyl isomerase 4 protein-coding chr3-4284 chr3 155598384 155598594 + 11.4 0.000 intron (NM_001349252, intron 2 of 24) intron (NM_001349252, intron 2 of 24) 77854 NM_001130960 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr13-3925 chr13 58287898 58288108 + 11.4 0.000 Intergenic L2a|LINE|L2 -54886 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr2-4600 chr2 112757213 112757423 + 11.4 0.000 intron (NR_130712, intron 3 of 9) intron (NR_130712, intron 3 of 9) 7291 NM_001304361 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L - cytoskeleton associated protein 2 like protein-coding chr4-4277 chr4 24382514 24382724 + 11.4 0.000 intron (NM_001330752, intron 1 of 13) intron (NM_001330752, intron 1 of 13) 90286 NR_148987 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr6-965 chr6 53795045 53795255 + 11.4 0.000 5' UTR (NM_018214, exon 1 of 14) 5' UTR (NM_018214, exon 1 of 14) 145 NM_018214 55227 Hs.606493 NM_018214 ENSG00000137269 LRRC1 LANO|dJ523E19.1 leucine rich repeat containing 1 protein-coding chr2-7475 chr2 15913468 15913678 + 11.4 0.000 Intergenic LTR16|LTR|ERVL -6826 NR_125783 103752554 Hs.269571 NR_125783 ENSG00000223850 MYCNUT MYCNUN|lncUSMycN MYCN upstream transcript ncRNA chr19-3995 chr19 1994688 1994898 + 11.4 0.000 intron (NM_017797, intron 2 of 8) L1M4|LINE|L1 20921 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr1-4659 chr1 202712535 202712745 + 11.4 0.000 Intergenic Intergenic -2186 NM_177402 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr13-494 chr13 35474757 35474967 + 11.4 0.000 3' UTR (NM_005584, exon 1 of 1) 3' UTR (NM_005584, exon 1 of 1) 1827 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr7-4632 chr7 28958150 28958360 + 11.4 0.000 promoter-TSS (NM_014817) promoter-TSS (NM_014817) 75 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr6-5241 chr6 136214532 136214742 + 11.4 0.000 Intergenic Intergenic 35674 NM_001099286 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr13-1491 chr13 111156389 111156599 + 11.4 0.000 intron (NM_001354047, intron 2 of 16) intron (NM_001354047, intron 2 of 16) 2828 NM_001354050 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr1-4355 chr1 90936106 90936316 + 11.4 0.000 intron (NM_032186, intron 2 of 3) intron (NM_032186, intron 2 of 3) 84452 NR_146610 105378854 Hs.606283 NR_146610 LINC01763 - long intergenic non-protein coding RNA 1763 ncRNA chr7-4583 chr7 12573063 12573273 + 11.4 0.000 intron (NR_156701, intron 1 of 14) intron (NR_156701, intron 1 of 14) 2448 NR_156701 85477 Hs.633359 NM_033128 ENSG00000006747 SCIN - scinderin protein-coding chr8-1614 chr8 145051010 145051220 + 11.4 0.000 Intergenic AluY|SINE|Alu -1352 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding chr5-1724 chr5 142901064 142901274 + 11.4 0.000 intron (NR_146198, intron 6 of 22) Plat_L3|LINE|CR1 -32259 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr17-4500 chr17 69669855 69670065 + 11.4 0.000 intron (NR_109972, intron 3 of 4) MER5A|DNA|hAT-Charlie 75973 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chrX-1490 chrX 145550103 145550313 + 11.4 0.000 Intergenic Intergenic -267621 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr7-4821 chr7 99982086 99982296 + 11.4 0.000 intron (NR_036679, intron 1 of 1) MLT2D|LTR|ERVL 1429 NR_036679 646282 Hs.721816 NR_036679 ENSG00000214313 AZGP1P1 - AZGP1 pseudogene 1 pseudo chr7-2759 chr7 51321910 51322120 + 11.4 0.000 Intergenic Intergenic -5154 NM_001287436 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr2-1669 chr2 85741839 85742049 + 11.4 0.000 Intergenic Intergenic -12047 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr5-2169 chr5 116600890 116601100 + 11.4 0.000 intron (NR_147170, intron 2 of 2) L2a|LINE|L2 -26172 NM_020796 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding chr4-1018 chr4 7264515 7264725 + 11.4 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -45830 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr1-2768 chr1 112369706 112369916 + 11.4 0.000 Intergenic Intergenic -26403 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr7-2997 chr7 37907884 37908094 + 11.4 0.000 intron (NM_003014, intron 5 of 5) MIRb|SINE|MIR 8828 NM_003014 6424 Hs.658169 NM_003014 ENSG00000106483 SFRP4 FRP-4|FRPHE|FRZB-2|PYL|sFRP-4 secreted frizzled related protein 4 protein-coding chr18-1015 chr18 57013087 57013297 + 11.4 0.000 intron (NM_015285, intron 26 of 27) MER1B|DNA|hAT-Charlie 58927 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr5-8110 chr5 97847600 97847810 + 11.4 0.000 intron (NR_146299, intron 1 of 2) intron (NR_146299, intron 1 of 2) 6947 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA chr1-5218 chr1 184801570 184801780 + 11.4 0.000 intron (NM_052966, intron 12 of 13) L2b|LINE|L2 -46817 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr12-8307 chr12 128772099 128772309 + 11.4 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 51754 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chrX-1684 chrX 7477204 7477414 + 11.4 0.000 Intergenic Intergenic 224836 NM_001320754 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr3-7970 chr3 172066423 172066633 + 11.4 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 25997 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr10-7090 chr10 93003931 93004141 + 11.4 0.000 intron (NM_001319195, intron 19 of 21) L2c|LINE|L2 -56762 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr1-9094 chr1 16268240 16268450 + 11.4 0.000 intron (NM_018994, intron 4 of 9) intron (NM_018994, intron 4 of 9) -31162 NM_030907 79363 Hs.546430 NM_030907 ENSG00000132881 CPLANE2 C1orf89|RSG1 ciliogenesis and planar polarity effector 2 protein-coding chr8-5459 chr8 42131872 42132082 + 11.4 0.000 Intergenic Intergenic -20969 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr4-1371 chr4 76691070 76691280 + 11.4 0.000 intron (NM_020859, intron 2 of 10) Plat_L3|LINE|CR1 115624 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr2-3711 chr2 223954492 223954702 + 11.4 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -2866 NM_022915 65080 Hs.203559 NM_022915 ENSG00000135900 MRPL44 COXPD16|L44MT|MRP-L44 mitochondrial ribosomal protein L44 protein-coding chr9-757 chr9 92809151 92809361 + 11.4 0.000 promoter-TSS (NR_026868) promoter-TSS (NR_026868) -355 NR_026868 138649 Hs.643597 NM_001010925 ENSG00000187984 ANKRD19P ANKRD19|bA526D8.2 ankyrin repeat domain 19, pseudogene pseudo chr13-1077 chr13 48305562 48305772 + 11.4 0.000 intron (NM_000321, intron 1 of 26) intron (NM_000321, intron 1 of 26) 1920 NM_000321 5925 Hs.408528 NM_000321 ENSG00000139687 RB1 OSRC|PPP1R130|RB|p105-Rb|pRb|pp110 RB transcriptional corepressor 1 protein-coding chr17-4906 chr17 73961679 73961889 + 11.4 0.000 Intergenic MSTB|LTR|ERVL-MaLR -133247 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr6-4150 chr6 283274 283484 + 11.4 0.000 Intergenic Intergenic -8678 NR_104473 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr1-14732 chr1 66561988 66562198 + 11.4 0.000 intron (NM_001350218, intron 1 of 22) intron (NM_001350218, intron 1 of 22) 27940 NM_001350217 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr5-2939 chr5 142492685 142492895 + 11.4 0.000 Intergenic Intergenic 128544 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr1-10479 chr1 163171167 163171377 + 11.4 0.000 intron (NM_001254748, intron 2 of 5) intron (NM_001254748, intron 2 of 5) 9597 NR_110699 101928404 Hs.683933 NR_110699 ENSG00000232892 LOC101928404 - uncharacterized LOC101928404 ncRNA chr13-1057 chr13 20400148 20400358 + 11.4 0.000 Intergenic L2a|LINE|L2 33593 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr15-775 chr15 40940378 40940588 + 11.4 0.000 Intergenic Intergenic 11143 NM_019074 54567 Hs.511076 NM_019074 ENSG00000128917 DLL4 AOS6|delta4|hdelta2 delta like canonical Notch ligand 4 protein-coding chr6-3045 chr6 57751221 57751431 + 11.4 0.000 Intergenic Intergenic 185603 NR_133000 375513 Hs.561539 NM_206908 GUSBP4 C6orf216|GUSBL2|SMA3-L|SMAC3L GUSB pseudogene 4 pseudo chr6-2245 chr6 50007793 50008003 + 11.4 0.000 Intergenic Intergenic 14083 NM_001037728 245913 Hs.571093 NM_001037497 ENSG00000203970 DEFB110 DEFB-10|DEFB-11|DEFB111 defensin beta 110 protein-coding chr6-4357 chr6 20003252 20003462 + 11.4 0.000 Intergenic LTR85c|LTR|Gypsy? 165987 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr2-5117 chr2 20139091 20139301 + 11.4 0.000 Intergenic Intergenic 85934 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr1-5000 chr1 63987073 63987283 + 11.4 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 125027 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr15-2279 chr15 57387914 57388124 + 11.4 0.000 intron (NM_032866, intron 1 of 18) intron (NM_032866, intron 1 of 18) 11514 NM_001252335 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr10-3848 chr10 7810832 7811042 + 11.4 0.000 Intergenic L1MB7|LINE|L1 -7568 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding chr13-2357 chr13 37789077 37789287 + 11.4 0.000 intron (NM_003306, intron 1 of 10) L2|LINE|L2 81243 NM_001135955 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr1-3915 chr1 84379222 84379432 + 11.4 0.000 intron (NR_003927, intron 2 of 6) MIRb|SINE|MIR 5474 NR_003927 391051 Hs.647646 NR_003927 UOX UOXP|URICASE urate oxidase (pseudogene) pseudo chr1-5148 chr1 156943579 156943789 + 11.4 0.000 intron (NM_014784, intron 31 of 39) intron (NM_014784, intron 31 of 39) -7440 NR_030527 768220 NR_030527 ENSG00000211581 MIR765 MIRN765|hsa-mir-765|mir-765 microRNA 765 ncRNA chr7-6389 chr7 152132203 152132413 + 11.4 0.000 Intergenic Intergenic 57271 NM_001371474 chr3-4917 chr3 194034576 194034786 + 11.4 0.000 intron (NR_136179, intron 1 of 2) intron (NR_136179, intron 1 of 2) -31022 NR_033944 647323 Hs.652830 NR_033944 ENSG00000214146 LINC02026 - long intergenic non-protein coding RNA 2026 ncRNA chr15-1120 chr15 101070644 101070854 + 11.4 0.000 3' UTR (NM_024652, exon 34 of 34) 3' UTR (NM_024652, exon 34 of 34) 151392 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr9-3549 chr9 38132954 38133164 + 11.4 0.000 Intergenic Intergenic -63832 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr16-1114 chr16 181388 181598 + 11.4 0.000 TTS (NM_005331) TTS (NM_005331) 1034 NM_005331 3049 Hs.247921 NM_005331 ENSG00000086506 HBQ1 HBQ hemoglobin subunit theta 1 protein-coding chr1-4031 chr1 197390963 197391173 + 11.4 0.000 intron (NM_001193640, intron 3 of 9) intron (NM_001193640, intron 3 of 9) 122816 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr6-5057 chr6 114001730 114001940 + 11.4 0.000 intron (NR_125845, intron 4 of 9) intron (NR_125845, intron 4 of 9) -30687 NM_001527 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr7-1879 chr7 94348236 94348446 + 11.4 0.000 Intergenic Intergenic 43851 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr20-2195 chr20 51254435 51254645 + 11.4 0.000 Intergenic MIRb|SINE|MIR 198437 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr12-2847 chr12 712300 712510 + 11.4 0.000 Intergenic MER4C|LTR|ERV1 -40174 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr3-3617 chr3 99578090 99578300 + 11.4 0.000 Intergenic Intergenic -60399 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr16-4032 chr16 1045725 1045935 + 11.4 0.000 Intergenic Intergenic -26926 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr6-2726 chr6 66508469 66508679 + 11.4 0.000 Intergenic Intergenic 720695 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr7-2687 chr7 20223421 20223631 + 11.4 0.000 Intergenic Intergenic 5949 NR_134568 100506098 Hs.59203 NR_134567 ENSG00000233834 LOC100506098 - uncharacterized LOC100506098 ncRNA chr1-6022 chr1 61846913 61847123 + 11.4 0.000 TTS (NR_162146) TTS (NR_162146) 943 NR_162146 113219465 NR_162146 MIR12132 - microRNA 12132 ncRNA chr2-3612 chr2 101699804 101700014 + 11.4 0.000 intron (NM_145686, intron 2 of 30) intron (NM_145686, intron 2 of 30) 2202 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr10-3285 chr10 133520494 133520704 + 11.4 0.000 Intergenic Intergenic -6764 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr7-2329 chr7 130961154 130961364 + 11.4 0.000 intron (NR_109852, intron 4 of 5) intron (NR_109852, intron 4 of 5) 47795 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr11-3041 chr11 3604323 3604533 + 11.4 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -22032 NR_002720 7221 Hs.131910 NR_002720 ENSG00000182048 TRPC2 - transient receptor potential cation channel subfamily C member 2 (pseudogene) pseudo chr8-1955 chr8 58284039 58284249 + 11.4 0.000 Intergenic Plat_L3|LINE|CR1 -12043 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr16-3133 chr16 72743443 72743653 + 11.4 0.000 Intergenic L1PA16|LINE|L1 -78578 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr4-1453 chr4 139302270 139302480 + 11.4 0.000 intron (NM_057175, intron 1 of 19) intron (NM_057175, intron 1 of 19) 102 NM_001184989 4717 Hs.84549 NM_002494 ENSG00000109390 NDUFC1 KFYI NADH:ubiquinone oxidoreductase subunit C1 protein-coding chr13-3701 chr13 37488904 37489114 + 11.4 0.000 Intergenic Intergenic -4225 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chr7-3672 chr7 46871588 46871798 + 11.4 0.000 Intergenic Intergenic -174571 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr1-5320 chr1 224951324 224951534 + 11.4 0.000 intron (NM_001349912, intron 1 of 5) intron (NM_001349912, intron 1 of 5) 21754 NM_001367481 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr9-3382 chr9 128183833 128184043 + 11.4 0.000 intron (NM_001131016, intron 5 of 16) AluSx1|SINE|Alu 7634 NM_001257976 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr3-2889 chr3 48205258 48205468 + 11.4 0.000 Intergenic Intergenic 8799 NR_039645 100616407 NR_039645 ENSG00000265483 MIR4443 mir-4443 microRNA 4443 ncRNA chr15-3785 chr15 68470049 68470259 + 11.4 0.000 Intergenic Intergenic -37991 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr22-1874 chr22 41672825 41673035 + 11.4 0.000 Intergenic Intergenic 15937 NM_005008 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chr1-15614 chr1 161905444 161905654 + 11.4 0.000 intron (NM_007348, intron 14 of 15) intron (NM_007348, intron 14 of 15) 118916 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr8-6283 chr8 42473254 42473464 + 11.4 0.000 intron (NM_006749, intron 1 of 10) L2a|LINE|L2 27872 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr20-1979 chr20 44142547 44142757 + 11.4 0.000 intron (NM_020433, intron 2 of 5) L2a|LINE|L2 44536 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr15-1512 chr15 52747814 52748024 + 11.4 0.000 Intergenic MLT2C1|LTR|ERVL 32965 NR_073510 3175 Hs.555318 NM_004498 ENSG00000169856 ONECUT1 HNF-6|HNF6|HNF6A one cut homeobox 1 protein-coding chr20-1793 chr20 62155694 62155904 + 11.4 0.000 intron (NR_125980, intron 2 of 12) HAL1|LINE|L1 12030 NR_125980 26039 Hs.154429 NM_015558 ENSG00000184402 SS18L1 CREST|LP2261 SS18L1 subunit of BAF chromatin remodeling complex protein-coding chr2-2698 chr2 31728329 31728539 + 11.4 0.000 Intergenic L1MA4|LINE|L1 75546 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA chr1-5109 chr1 146013187 146013397 + 11.4 0.000 Intergenic Intergenic 8443 NM_213652 148738 Hs.632436 NM_145277 ENSG00000168509 HJV HFE2|HFE2A|JH|RGMC hemojuvelin BMP co-receptor protein-coding chrX-1353 chrX 142244324 142244534 + 11.4 0.000 Intergenic L1MA9|LINE|L1 -39139 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr17-1319 chr17 82077123 82077333 + 11.4 0.000 Intergenic Intergenic -11424 NM_022156 64118 Hs.514599 NM_022156 ENSG00000169718 DUS1L DUS1|PP3111 dihydrouridine synthase 1 like protein-coding chr22-1931 chr22 46495200 46495410 + 11.4 0.000 intron (NM_014246, intron 1 of 34) Tigger3b|DNA|TcMar-Tigger 42315 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr13-501 chr13 52128866 52129076 + 11.4 0.000 promoter-TSS (NR_110306) promoter-TSS (NR_110306) 76 NR_110306 101929657 Hs.637461 NR_110306 ENSG00000273523 LOC101929657 - uncharacterized LOC101929657 ncRNA chr12-4768 chr12 52972136 52972346 + 11.4 0.000 Intergenic MIR3|SINE|MIR -22381 NM_001256293 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr20-1633 chr20 17928112 17928322 + 11.4 0.000 Intergenic Intergenic 34729 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr15-2450 chr15 77939315 77939525 + 11.4 0.000 non-coding (NR_157580, exon 5 of 5) non-coding (NR_157580, exon 5 of 5) 5141 NR_157580 440292 NR_157580 LOC440292 - COMM domain containing 4 pseudogene pseudo chr10-1486 chr10 132265451 132265661 + 11.4 0.000 intron (NM_001318878, intron 1 of 11) intron (NM_001318878, intron 1 of 11) -16448 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr5-1720 chr5 139698625 139698835 + 11.4 0.000 Intergenic Intergenic 23287 NM_001317211 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr1-7646 chr1 6468327 6468537 + 11.4 0.000 exon (NM_001265593, exon 20 of 21) exon (NM_001265593, exon 20 of 21) -2237 NM_001039664 8718 Hs.462529 NM_003790 ENSG00000215788 TNFRSF25 APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR TNF receptor superfamily member 25 protein-coding chr2-6393 chr2 122212124 122212334 + 11.4 0.000 Intergenic Intergenic 456578 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr12-7174 chr12 49171755 49171965 + 11.4 0.000 Intergenic MamTip2|DNA|hAT-Tip100 17220 NM_006009 7846 Hs.654422 NM_006009 ENSG00000167552 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin alpha 1a protein-coding chr9-2699 chr9 84682216 84682426 + 11.4 0.000 intron (NM_001369550, intron 1 of 11) MamRep605|LTR?|LTR? 10230 NM_001369536 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr3-4109 chr3 110589540 110589750 + 11.4 0.000 Intergenic Intergenic 480314 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr7-2746 chr7 45136112 45136322 + 11.4 0.000 Intergenic Intergenic -21574 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr4-1138 chr4 17748461 17748671 + 11.4 0.000 intron (NM_015688, intron 1 of 17) AluJb|SINE|Alu 33055 NM_015688 27146 Hs.744951 NM_015688 ENSG00000047662 FAM184B - family with sequence similarity 184 member B protein-coding chr22-960 chr22 49626411 49626621 + 11.4 0.000 intron (NM_001289922, intron 2 of 5) intron (NM_001289922, intron 2 of 5) 31003 NR_110522 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr2-4350 chr2 241103130 241103340 + 11.4 0.000 promoter-TSS (NR_138463) promoter-TSS (NR_138463) -903 NR_028051 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr4-3040 chr4 137545534 137545744 + 11.4 0.000 promoter-TSS (NR_146553) promoter-TSS (NR_146553) -92 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr11-4414 chr11 85936788 85936998 + 11.4 0.000 Intergenic MER21A|LTR|ERVL 81792 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr17-5174 chr17 10306448 10306658 + 11.4 0.000 exon (NM_003802, exon 37 of 41) exon (NM_003802, exon 37 of 41) 66453 NM_003802 8735 Hs.711142 NM_003802 ENSG00000006788 MYH13 MyHC-IIL|MyHC-eo myosin heavy chain 13 protein-coding chr12-4939 chr12 69529064 69529274 + 11.4 0.000 intron (NM_001278354, intron 2 of 9) L2a|LINE|L2 13729 NR_145803 109623461 NR_145803 SNORA113 - small nucleolar RNA, H/ACA box 113 snoRNA chr7-3340 chr7 74463271 74463481 + 11.4 0.000 intron (NM_016328, intron 1 of 26) AluJo|SINE|Alu 9470 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr17-3551 chr17 76568093 76568303 + 11.4 0.000 intron (NM_006456, intron 7 of 8) MER20|DNA|hAT-Charlie 6565 NR_004395 677848 NR_004395 ENSG00000278261 SNORD1A R38A|snR38A small nucleolar RNA, C/D box 1A snoRNA chr17-1281 chr17 81459999 81460209 + 11.4 0.000 intron (NM_001291324, intron 23 of 27) intron (NM_001291324, intron 23 of 27) -8916 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr3-6476 chr3 109834766 109834976 + 11.4 0.000 Intergenic Intergenic 232043 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr17-3051 chr17 80170486 80170696 + 11.4 0.000 intron (NR_047566, intron 1 of 21) intron (NR_047566, intron 1 of 21) 561 NM_001366385 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr5-2027 chr5 58185023 58185233 + 11.4 0.000 Intergenic Intergenic -62787 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr17-1681 chr17 1981531 1981741 + 11.4 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -36080 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr21-359 chr21 29028949 29029159 + 11.4 0.000 intron (NM_001032410, intron 3 of 18) L1ME4a|LINE|L1 4386 NM_006447 10600 Hs.99819 NM_006447 ENSG00000156256 USP16 UBP-M|UBPM ubiquitin specific peptidase 16 protein-coding chr22-1283 chr22 36211112 36211322 + 11.4 0.000 Intergenic LTR38|LTR|ERV1 -6384 NM_030643 80832 Hs.115099 NM_030643 ENSG00000100336 APOL4 APOL-IV|APOLIV apolipoprotein L4 protein-coding chr7-1621 chr7 14604687 14604897 + 11.4 0.000 intron (NM_001350717, intron 16 of 24) intron (NM_001350717, intron 16 of 24) 236658 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr8-1463 chr8 19067713 19067923 + 11.4 0.000 Intergenic Intergenic -54115 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr12-3976 chr12 15467539 15467749 + 11.4 0.000 intron (NM_030667, intron 1 of 26) LTR85a|LTR|Gypsy? -78967 NM_030669 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr10-2647 chr10 92211296 92211506 + 11.4 0.000 intron (NM_001178137, intron 2 of 9) A-rich|Low_complexity|Low_complexity 31878 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr21-756 chr21 42790349 42790559 + 11.4 0.000 Intergenic Intergenic -10460 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr7-5919 chr7 98371338 98371548 + 11.4 0.000 intron (NM_018842, intron 1 of 13) intron (NM_018842, intron 1 of 13) 29647 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr12-5421 chr12 122232676 122232886 + 11.4 0.000 intron (NM_001351018, intron 12 of 12) intron (NM_001351018, intron 12 of 12) -5325 NM_019887 56616 Hs.169611 NM_019887 ENSG00000184047 DIABLO DFNA64|SMAC diablo IAP-binding mitochondrial protein protein-coding chr14-1288 chr14 101715753 101715963 + 11.4 0.000 Intergenic MSTA|LTR|ERVL-MaLR -14579 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr7-3922 chr7 128102653 128102863 + 11.4 0.000 Intergenic Intergenic 20897 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr8-2702 chr8 96268002 96268212 + 11.4 0.000 intron (NM_014754, intron 1 of 12) intron (NM_014754, intron 1 of 12) 6205 NM_001290225 9791 Hs.292579 NM_014754 ENSG00000156471 PTDSS1 LMHD|PSS1|PSSA phosphatidylserine synthase 1 protein-coding chr14-1696 chr14 100843577 100843787 + 11.4 0.000 intron (NR_033360, intron 5 of 6) intron (NR_033360, intron 5 of 6) -8708 NR_030528 768222 NR_030528 ENSG00000211574 MIR770 MIRN770|hsa-mir-770 microRNA 770 ncRNA chr2-6100 chr2 197484994 197485204 + 11.4 0.000 Intergenic Intergenic 1804 NR_132787 106635539 NR_132787 SNORA105A - small nucleolar RNA, H/ACA box 105A snoRNA chr1-10004 chr1 85195931 85196141 + 11.4 0.000 intron (NM_032184, intron 1 of 6) intron (NM_032184, intron 1 of 6) 4980 NM_032184 84144 Hs.533853 NM_032184 ENSG00000097096 SYDE2 - synapse defective Rho GTPase homolog 2 protein-coding chr22-856 chr22 30643269 30643479 + 11.4 0.000 intron (NM_001318371, intron 1 of 2) intron (NM_001318371, intron 1 of 2) 7559 NM_001318370 339665 Hs.660384 NM_001001479 ENSG00000100036 SLC35E4 - solute carrier family 35 member E4 protein-coding chr9-1332 chr9 95072878 95073088 + 11.4 0.000 intron (NM_032823, intron 12 of 14) intron (NM_032823, intron 12 of 14) 7633 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr10-3247 chr10 120480212 120480422 + 11.4 0.000 intron (NR_134516, intron 2 of 4) intron (NR_134516, intron 2 of 4) 23363 NM_001030059 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr9-4530 chr9 74361120 74361330 + 11.4 0.000 Intergenic Intergenic -10306 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr5-5510 chr5 142922676 142922886 + 11.4 0.000 intron (NR_146198, intron 10 of 22) intron (NR_146198, intron 10 of 22) -53871 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr1-3899 chr1 63753504 63753714 + 11.4 0.000 Intergenic Intergenic -20408 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr5-6566 chr5 17079637 17079847 + 11.4 0.000 Intergenic Intergenic 76250 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr6-8110 chr6 126685633 126685843 + 11.4 0.000 Intergenic L1PBa|LINE|L1 201107 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr1-5987 chr1 42658798 42659008 + 11.4 0.000 exon (NM_006347, exon 2 of 10) exon (NM_006347, exon 2 of 10) 480 NM_006347 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr22-896 chr22 20423097 20423307 + 11.4 0.000 Intergenic Intergenic 14623 NM_182895 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chr10-3077 chr10 6009003 6009213 + 11.4 0.000 Intergenic Charlie20a|DNA|hAT-Charlie -30367 NM_001351095 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr6-3245 chr6 145408464 145408674 + 11.4 0.000 Intergenic Intergenic 278308 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr14-2719 chr14 91041256 91041466 + 11.4 0.000 intron (NM_182398, intron 1 of 12) intron (NM_182398, intron 1 of 12) 18763 NM_001322237 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr15-4798 chr15 72217391 72217601 + 11.4 0.000 exon (NM_001316318, exon 3 of 11) exon (NM_001316318, exon 3 of 11) 12415 NM_001206799 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr3-4536 chr3 127264466 127264676 + 11.4 0.000 Intergenic Intergenic 23475 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr3-2778 chr3 183185666 183185876 + 11.4 0.000 intron (NM_015078, intron 27 of 29) intron (NM_015078, intron 27 of 29) -23037 NM_014398 27074 Hs.518448 NM_014398 ENSG00000078081 LAMP3 CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403 lysosomal associated membrane protein 3 protein-coding chr17-4627 chr17 8509343 8509553 + 11.4 0.000 intron (NM_001256012, intron 25 of 42) intron (NM_001256012, intron 25 of 42) 73564 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr20-881 chr20 23143164 23143374 + 11.4 0.000 Intergenic Intergenic -10633 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr12-2079 chr12 1563288 1563498 + 11.4 0.000 Intergenic Intergenic 31188 NM_152441 144699 Hs.367956 NM_152441 ENSG00000171823 FBXL14 Fbl14 F-box and leucine rich repeat protein 14 protein-coding chr1-4534 chr1 45953995 45954205 + 11.4 0.000 intron (NM_001324321, intron 3 of 28) intron (NM_001324321, intron 3 of 28) 89752 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr8-1057 chr8 25184324 25184534 + 11.4 0.000 promoter-TSS (NM_001322810) promoter-TSS (NM_001322810) -260 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr17-3579 chr17 80462831 80463041 + 11.4 0.000 Intergenic Intergenic 13671 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr11-2731 chr11 13222435 13222645 + 11.4 0.000 Intergenic Intergenic -54112 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr3-1434 chr3 12139302 12139512 + 11.4 0.000 intron (NM_133625, intron 1 of 12) intron (NM_133625, intron 1 of 12) 19505 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr6-2006 chr6 26272883 26273093 + 11.4 0.000 promoter-TSS (NM_003525) promoter-TSS (NM_003525) 12 NM_003525 8346 Hs.553506 NM_003525 ENSG00000278588 HIST1H2BI H2B/k|H2BFK histone cluster 1 H2B family member i protein-coding chr8-5646 chr8 109119340 109119550 + 11.4 0.000 exon (NM_003301, exon 3 of 3) exon (NM_003301, exon 3 of 3) 32817 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr7-6544 chr7 47445842 47446052 + 11.4 0.000 intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 18856 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr10-3741 chr10 118694963 118695173 + 11.4 0.000 intron (NM_153810, intron 6 of 8) intron (NM_153810, intron 6 of 8) 59902 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr10-2014 chr10 65864679 65864889 + 11.4 0.000 Intergenic Intergenic 293359 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr1-3861 chr1 40790660 40790870 + 11.4 0.000 intron (NM_004700, intron 1 of 13) intron (NM_004700, intron 1 of 13) 6978 NM_172163 9132 Hs.473058 NM_004700 ENSG00000117013 KCNQ4 DFNA2|DFNA2A|KV7.4 potassium voltage-gated channel subfamily Q member 4 protein-coding chr1-15530 chr1 157042365 157042575 + 11.4 0.000 intron (NM_014784, intron 1 of 39) MIRc|SINE|MIR 3272 NM_014784 9826 Hs.516954 NM_014784 ENSG00000132694 ARHGEF11 GTRAP48|PDZ-RHOGEF Rho guanine nucleotide exchange factor 11 protein-coding chr1-9658 chr1 47984522 47984732 + 11.4 0.000 intron (NM_001194986, intron 2 of 6) L2c|LINE|L2 12758 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr11-3047 chr11 6796763 6796973 + 11.4 0.000 promoter-TSS (NM_003696) promoter-TSS (NM_003696) -960 NM_003696 8590 Hs.652252 NM_003696 ENSG00000184933 OR6A2 I7|OR11-55|OR6A1|OR6A2P olfactory receptor family 6 subfamily A member 2 protein-coding chr17-1587 chr17 49491149 49491359 + 11.4 0.000 Intergenic Intergenic -4039 NM_002507 4804 Hs.415768 NM_002507 ENSG00000064300 NGFR CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR nerve growth factor receptor protein-coding chr2-5269 chr2 61731810 61732020 + 11.4 0.000 Intergenic Intergenic 122145 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr15-1456 chr15 89654506 89654716 + 11.4 0.000 intron (NM_198525, intron 1 of 18) L2b|LINE|L2 856 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chr16-3445 chr16 89789084 89789294 + 11.4 0.000 intron (NM_000135, intron 14 of 42) intron (NM_000135, intron 14 of 42) 27458 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr8-1973 chr8 72268331 72268541 + 11.4 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -16802 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo chr11-9349 chr11 46947301 46947511 + 11.4 0.000 intron (NM_001278222, intron 1 of 7) intron (NM_001278222, intron 1 of 7) 10645 NM_001003677 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr12-5744 chr12 131049177 131049387 + 11.4 0.000 intron (NM_198827, intron 13 of 24) intron (NM_198827, intron 13 of 24) -55306 NR_131950 105755954 Hs.677534 NR_131950 ADGRD1-AS1 LACAT8 ADGRD1 antisense RNA 1 ncRNA chr7-2350 chr7 2197785 2197995 + 11.4 0.000 intron (NM_001013837, intron 10 of 18) (CCCAGCC)n|Simple_repeat|Simple_repeat 35055 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr12-1486 chr12 21476997 21477207 + 11.4 0.000 intron (NM_002907, intron 7 of 14) intron (NM_002907, intron 7 of 14) 24533 NM_002907 5965 Hs.235069 NM_002907 ENSG00000004700 RECQL RECQL1|RecQ1 RecQ like helicase protein-coding chr14-2259 chr14 105511009 105511219 + 11.4 0.000 Intergenic L1MEg|LINE|L1 -15469 NM_025268 80757 Hs.157527 NM_025268 ENSG00000184986 TMEM121 TMEM121A|hole transmembrane protein 121 protein-coding chr15-4475 chr15 50145307 50145517 + 11.4 0.000 Intergenic Intergenic -26179 NR_073597 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr9-2633 chr9 22190797 22191007 + 11.4 0.000 Intergenic L1PA11|LINE|L1 -181589 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr7-1219 chr7 100128133 100128343 + 11.4 0.000 3' UTR (NM_203397, exon 2 of 2) 3' UTR (NM_203397, exon 2 of 2) 1271 NM_203397 255374 Hs.632319 NM_203397 ENSG00000214309 MBLAC1 - metallo-beta-lactamase domain containing 1 protein-coding chr3-2402 chr3 188901536 188901746 + 11.4 0.000 Intergenic Intergenic 45998 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr5-2539 chr5 171945485 171945695 + 11.4 0.000 intron (NM_033644, intron 1 of 12) MIR|SINE|MIR 61283 NM_033645 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr3-4435 chr3 22192418 22192628 + 11.4 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 235384 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr1-7069 chr1 184160480 184160690 + 11.4 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 108855 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr9-7726 chr9 73837002 73837212 + 11.4 0.000 Intergenic AluSx|SINE|Alu -534424 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr5-6017 chr5 153158793 153159003 + 11.4 0.000 Intergenic Intergenic -186549 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr15-925 chr15 69568609 69568819 + 11.4 0.000 intron (NR_026979, intron 4 of 4) intron (NR_026979, intron 4 of 4) 6994 NR_026979 145837 Hs.410126 NR_026979 DRAIC - downregulated RNA in cancer, inhibitor of cell invasion and migration ncRNA chr18-2527 chr18 75223866 75224076 + 11.4 0.000 intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 12442 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chrX-999 chrX 30154027 30154237 + 11.4 0.000 Intergenic Intergenic -61431 NM_002364 4113 Hs.113824 NM_002364 ENSG00000099399 MAGEB2 CT3.2|DAM6|MAGE-XP-2 MAGE family member B2 protein-coding chr15-681 chr15 89836627 89836837 + 11.4 0.000 intron (NR_023361, intron 6 of 6) intron (NR_023361, intron 6 of 6) 13989 NR_049817 100847059 NR_049817 ENSG00000264966 MIR5094 - microRNA 5094 ncRNA chr19-3130 chr19 17346196 17346406 + 11.4 0.000 Intergenic Intergenic 8748 NM_133644 84705 Hs.334885 NM_032620 ENSG00000130299 GTPBP3 COXPD23|GTPBG3|MSS1|MTGP1|THDF1 GTP binding protein 3, mitochondrial protein-coding chr19-1641 chr19 4172991 4173201 + 11.4 0.000 TTS (NM_001271997) TTS (NM_001271997) 9210 NM_001321064 51548 Hs.423756 NM_016539 ENSG00000077463 SIRT6 SIR2L6 sirtuin 6 protein-coding chr1-3757 chr1 1849394 1849604 + 11.4 0.000 intron (NM_001282538, intron 1 of 9) AluJb|SINE|Alu 41588 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr2-3645 chr2 150528819 150529029 + 11.4 0.000 Intergenic Intergenic -41229 NM_001254738 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr11-4971 chr11 69056141 69056351 + 11.4 0.000 intron (NM_139075, intron 4 of 24) intron (NM_139075, intron 4 of 24) 7314 NM_139075 219931 Hs.131851 NM_139075 ENSG00000162341 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding chr12-2057 chr12 105318299 105318509 + 11.4 0.000 intron (NR_131986, intron 1 of 2) LTR24B|LTR|ERV1 8613 NR_131986 105369954 Hs.368938 NR_131986 ENSG00000257642 KCCAT198 - renal clear cell carcinoma-associated transcript 198 ncRNA chr17-2327 chr17 50266598 50266808 + 11.4 0.000 Intergenic Intergenic -4703 NM_001168215 162461 Hs.224630 NM_153229 ENSG00000167105 TMEM92 - transmembrane protein 92 protein-coding chr11-4086 chr11 30329092 30329302 + 11.4 0.000 intron (NM_152316, intron 1 of 3) L1ME3C|LINE|L1 6093 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr10-1549 chr10 101841205 101841415 + 11.4 0.000 intron (NM_173192, intron 1 of 8) CpG -1439 NM_173194 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr7-5533 chr7 45213329 45213539 + 11.4 0.000 Intergenic Intergenic 55643 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr8-3347 chr8 40735393 40735603 + 11.4 0.000 intron (NM_024645, intron 3 of 6) Tigger15a|DNA|TcMar-Tigger 162328 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr17-2109 chr17 3648527 3648737 + 11.4 0.000 intron (NM_001031681, intron 4 of 12) intron (NM_001031681, intron 4 of 12) 11872 NM_004937 1497 Hs.187667 NM_004937 ENSG00000040531 CTNS CTNS-LSB|PQLC4|SLC66A4 cystinosin, lysosomal cystine transporter protein-coding chr12-6839 chr12 14251363 14251573 + 11.4 0.000 Intergenic Intergenic -114164 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr14-1988 chr14 51575470 51575680 + 11.4 0.000 intron (NM_001042481, intron 2 of 14) intron (NM_001042481, intron 2 of 14) 24377 NR_047477 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr14-1167 chr14 53188048 53188258 + 11.4 0.000 Intergenic Intergenic 34799 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr5-1878 chr5 147508942 147509152 + 11.4 0.000 intron (NM_001197294, intron 1 of 13) intron (NM_001197294, intron 1 of 13) 1021 NM_001197294 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr3-7086 chr3 178821578 178821788 + 11.4 0.000 intron (NM_181361, intron 2 of 4) intron (NM_181361, intron 2 of 4) 38722 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr15-1015 chr15 80182864 80183074 + 11.4 0.000 intron (NM_000137, intron 13 of 13) intron (NM_000137, intron 13 of 13) 29970 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr3-3998 chr3 57956105 57956315 + 11.4 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -52212 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr7-3409 chr7 133315668 133315878 + 11.4 0.000 intron (NM_021807, intron 4 of 17) intron (NM_021807, intron 4 of 17) 24892 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chr21-1316 chr21 7929684 7929894 + 11.4 0.000 Intergenic (ATTCCATTCC)n|Simple_repeat|Simple_repeat -100157 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chr6-3179 chr6 126672728 126672938 + 11.4 0.000 Intergenic L1MEg2|LINE|L1 188202 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr1-3884 chr1 53575132 53575342 + 11.4 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 115838 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr16-692 chr16 71565080 71565290 + 11.4 0.000 promoter-TSS (NR_103851) promoter-TSS (NR_103851) 169 NR_103852 100132529 Hs.710296 NR_103851 ENSG00000260886 TAT-AS1 - TAT antisense RNA 1 ncRNA chr1-4126 chr1 932764 932974 + 11.4 0.000 intron (NM_152486, intron 4 of 13) intron (NM_152486, intron 4 of 13) 7138 NM_152486 148398 Hs.335293 NM_152486 ENSG00000187634 SAMD11 MRS sterile alpha motif domain containing 11 protein-coding chr18-794 chr18 55083612 55083822 + 11.4 0.000 Intergenic Intergenic 40589 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr11-2398 chr11 3209442 3209652 + 11.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -8785 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr3-1831 chr3 63328381 63328591 + 11.4 0.000 intron (NM_001130003, intron 2 of 5) intron (NM_001130003, intron 2 of 5) 50178 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr5-1498 chr5 126477392 126477602 + 11.4 0.000 intron (NR_146196, intron 5 of 14) Charlie16a|DNA|hAT-Charlie 12347 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr18-1994 chr18 40435794 40436004 + 11.4 0.000 Intergenic Intergenic 369613 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr11-2756 chr11 63667013 63667223 + 11.4 0.000 intron (NM_001290048, intron 1 of 12) Tigger7|DNA|TcMar-Tigger 4258 NM_015459 25923 Hs.356719 NM_015459 ENSG00000184743 ATL3 HSN1F atlastin GTPase 3 protein-coding chr9-3775 chr9 125972063 125972273 + 11.4 0.000 Intergenic Intergenic 223985 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr10-2343 chr10 72694946 72695156 + 11.4 0.000 intron (NM_001270680, intron 1 of 7) intron (NM_001270680, intron 1 of 7) 2432 NM_001270680 90550 Hs.591366 NM_138357 ENSG00000156026 MCU C10orf42|CCDC109A|HsMCU mitochondrial calcium uniporter protein-coding chr17-2775 chr17 2137641 2137851 + 11.4 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -48985 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr5-834 chr5 43066317 43066527 + 11.4 0.000 promoter-TSS (NR_102752) promoter-TSS (NR_102752) 549 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA chr1-10561 chr1 173126483 173126693 + 11.4 0.000 Intergenic MER4D1|LTR|ERV1 -75625 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr11-3611 chr11 69088848 69089058 + 11.4 0.000 3' UTR (NM_139075, exon 25 of 25) 3' UTR (NM_139075, exon 25 of 25) 5777 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr15-790 chr15 59295095 59295305 + 11.4 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 77671 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr4-3013 chr4 126267802 126268012 + 11.4 0.000 Intergenic L2a|LINE|L2 760648 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr10-2518 chr10 46993034 46993244 + 11.4 0.000 intron (NM_001042357, intron 9 of 10) L1P4a|LINE|L1 81417 NM_001352533 26095 Hs.440733 NM_015605 ENSG00000204179 PTPN20 CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 protein tyrosine phosphatase non-receptor type 20 protein-coding chr5-1614 chr5 66174424 66174634 + 11.4 0.000 intron (NM_139168, intron 10 of 12) intron (NM_139168, intron 10 of 12) 29694 NM_139168 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding chr6-5345 chr6 147457963 147458173 + 11.4 0.000 Intergenic Intergenic -50622 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr2-2161 chr2 231590236 231590446 + 11.4 0.000 Intergenic LTR54|LTR|ERV1 -2523 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr20-2087 chr20 20414399 20414609 + 11.4 0.000 intron (NM_020343, intron 37 of 39) intron (NM_020343, intron 37 of 39) 46400 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr11-4459 chr11 102171229 102171439 + 11.4 0.000 intron (NM_001282097, intron 3 of 7) intron (NM_001282097, intron 3 of 7) 58886 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr22-1211 chr22 31339280 31339490 + 11.4 0.000 intron (NM_032050, intron 2 of 3) intron (NM_032050, intron 2 of 3) 4036 NR_110542 101929760 Hs.661718 NR_110542 ENSG00000228839 PIK3IP1-AS1 - PIK3IP1 antisense RNA 1 (head to head) ncRNA chr18-137 chr18 31685123 31685333 + 11.4 0.000 promoter-TSS (NM_004775) promoter-TSS (NM_004775) -483 NM_004775 9331 Hs.591063 NM_004775 ENSG00000118276 B4GALT6 B4Gal-T6|beta4Gal-T6 beta-1,4-galactosyltransferase 6 protein-coding chr18-2298 chr18 78340737 78340947 + 11.4 0.000 Intergenic L1MA4|LINE|L1 -347115 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr2-5558 chr2 166419570 166419780 + 11.4 0.000 intron (NR_045628, intron 20 of 25) intron (NR_045628, intron 20 of 25) -43688 NM_002977 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr13-2079 chr13 66752753 66752963 + 11.4 0.000 intron (NM_020403, intron 2 of 3) intron (NM_020403, intron 2 of 3) -72311 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr5-2373 chr5 83375296 83375506 + 11.4 0.000 Intergenic Intergenic -96273 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr15-1115 chr15 88987961 88988171 + 11.4 0.000 Intergenic Intergenic -74687 NM_005928 4240 Hs.3745 NM_005928 ENSG00000140545 MFGE8 BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47 milk fat globule-EGF factor 8 protein protein-coding chr10-2561 chr10 69486973 69487183 + 11.4 0.000 intron (NM_012339, intron 3 of 7) intron (NM_012339, intron 3 of 7) 35611 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr2-7205 chr2 217218939 217219149 + 11.4 0.000 Intergenic Intergenic -63689 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr12-4915 chr12 67456462 67456672 + 11.4 0.000 Intergenic Intergenic -14008 NR_146500 102724433 NR_146500 ENSG00000256172 LINC02420 - long intergenic non-protein coding RNA 2420 ncRNA chr19-1399 chr19 35000862 35001072 + 11.4 0.000 intron (NM_001320034, intron 1 of 18) CpG 644 NM_001136199 57655 Hs.515351 NM_020895 ENSG00000089351 GRAMD1A KIAA1533 GRAM domain containing 1A protein-coding chr12-7552 chr12 71780383 71780593 + 11.4 0.000 intron (NM_014999, intron 4 of 6) intron (NM_014999, intron 4 of 6) 25625 NM_014999 23011 Hs.524590 NM_014999 ENSG00000080371 RAB21 - RAB21, member RAS oncogene family protein-coding chr18-1155 chr18 11752657 11752867 + 11.4 0.000 intron (NM_001369387, intron 1 of 11) intron (NM_001369387, intron 1 of 11) 677 NM_001369387 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr3-2350 chr3 150242384 150242594 + 11.4 0.000 Intergenic Intergenic 3789 NR_110167 101927992 Hs.534682 NR_110167 ENSG00000244541 LINC01213 - long intergenic non-protein coding RNA 1213 ncRNA chr2-1853 chr2 231482854 231483064 + 11.4 0.000 Intergenic Intergenic -18475 NM_005381 4691 Hs.79110 NM_005381 ENSG00000115053 NCL C23|Nsr1 nucleolin protein-coding chr18-1259 chr18 56933580 56933790 + 11.4 0.000 intron (NM_015285, intron 22 of 27) L3|LINE|CR1 138434 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr2-7969 chr2 64220833 64221043 + 11.4 0.000 Intergenic Intergenic -7463 NR_120420 100507006 Hs.442789 NR_120420 LOC100507006 - uncharacterized LOC100507006 ncRNA chr11-3767 chr11 48006726 48006936 + 11.4 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) 26272 NM_001098503 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr19-2673 chr19 12672113 12672323 + 11.4 0.000 TTS (NR_161468) TTS (NR_161468) 2465 NM_032332 84292 Hs.657204 NM_032332 ENSG00000123154 WDR83 MORG1 WD repeat domain 83 protein-coding chr4-2925 chr4 92746686 92746896 + 11.4 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 442392 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr7-2391 chr7 45155889 45156099 + 11.4 0.000 Intergenic Intergenic -1797 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr1-11426 chr1 63799447 63799657 + 11.4 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 25535 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr7-999 chr7 108003123 108003333 + 11.4 0.000 promoter-TSS (NM_002291) promoter-TSS (NM_002291) -67 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr5-8860 chr5 153269226 153269436 + 11.4 0.000 Intergenic MIRb|SINE|MIR -221193 NM_001258020 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr3-8855 chr3 9628233 9628443 + 11.4 0.000 Intergenic L1MB8|LINE|L1 -21167 NM_022485 64419 Hs.475382 NM_022485 ENSG00000163719 MTMR14 C3orf29 myotubularin related protein 14 protein-coding chr2-9081 chr2 202738548 202738758 + 11.4 0.000 intron (NM_173511, intron 4 of 7) intron (NM_173511, intron 4 of 7) 90581 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr6-5926 chr6 64945292 64945502 + 11.4 0.000 intron (NM_001292009, intron 15 of 43) intron (NM_001292009, intron 15 of 43) -356021 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr19-1374 chr19 1987602 1987812 + 11.4 0.000 intron (NM_017797, intron 5 of 8) intron (NM_017797, intron 5 of 8) 28007 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr7-3773 chr7 83387441 83387651 + 11.4 0.000 intron (NM_001178129, intron 14 of 16) intron (NM_001178129, intron 14 of 16) -224662 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr22-1553 chr22 37602486 37602696 + 11.4 0.000 Intergenic MIRb|SINE|MIR -5883 NM_001363771 26088 Hs.499158 NM_013365 ENSG00000100083 GGA1 - golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding chr4-1462 chr4 157867721 157867931 + 11.4 0.000 Intergenic Intergenic 295336 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr4-2956 chr4 106809115 106809325 + 11.4 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 227093 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr10-1821 chr10 257640 257850 + 11.4 0.000 Intergenic Intergenic 77751 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr2-2300 chr2 74887365 74887575 + 11.4 0.000 intron (NM_000189, intron 15 of 17) intron (NM_000189, intron 15 of 17) -21661 NR_125792 102724515 Hs.708649 NR_125792 ENSG00000204792 LINC01291 - long intergenic non-protein coding RNA 1291 ncRNA chr1-3318 chr1 15384322 15384532 + 11.4 0.000 intron (NM_052929, intron 30 of 30) intron (NM_052929, intron 30 of 30) -25461 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr11-5276 chr11 35352222 35352432 + 11.4 0.000 intron (NM_001195728, intron 1 of 11) intron (NM_001195728, intron 1 of 11) 67231 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr2-3241 chr2 235061925 235062135 + 11.4 0.000 Intergenic Intergenic 34295 NM_001371306 chr8-2673 chr8 87752261 87752471 + 11.4 0.000 Intergenic MER72|LTR|ERV1 121649 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr5-1765 chr5 14281856 14282066 + 11.4 0.000 intron (NM_007118, intron 3 of 56) intron (NM_007118, intron 3 of 56) 138619 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr9-4613 chr9 107755464 107755674 + 11.4 0.000 Intergenic Charlie13a|DNA|hAT-Charlie -265800 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr7-2410 chr7 73335680 73335890 + 11.4 0.000 intron (NM_001281304, intron 4 of 7) intron (NM_001281304, intron 4 of 7) 7624 NM_001281304 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr4-3049 chr4 140061564 140061774 + 11.4 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -66346 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr11-2139 chr11 35214941 35215151 + 11.4 0.000 intron (NM_001001389, intron 14 of 16) MER5A|DNA|hAT-Charlie 52096 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr10-5570 chr10 89418572 89418782 + 11.4 0.000 3' UTR (NM_012420, exon 2 of 2) 3' UTR (NM_012420, exon 2 of 2) 4109 NM_012420 24138 Hs.252839 NM_012420 ENSG00000152778 IFIT5 ISG58|P58|RI58 interferon induced protein with tetratricopeptide repeats 5 protein-coding chr20-3747 chr20 18985982 18986192 + 11.4 0.000 Intergenic MIRb|SINE|MIR -155884 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr2-7272 chr2 234520150 234520360 + 11.4 0.000 Intergenic Charlie16a|DNA|hAT-Charlie -23174 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr10-1244 chr10 89393051 89393261 + 11.4 0.000 5' UTR (NM_001270930, exon 2 of 3) 5' UTR (NM_001270930, exon 2 of 3) 533 NM_001270929 3434 Hs.20315 NM_001548 ENSG00000185745 IFIT1 C56|G10P1|IFI-56|IFI-56K|IFI56|IFIT-1|IFNAI1|ISG56|P56|RNM561 interferon induced protein with tetratricopeptide repeats 1 protein-coding chr12-2335 chr12 2982542 2982752 + 11.4 0.000 intron (NM_201443, intron 1 of 10) intron (NM_201443, intron 1 of 10) 22712 NM_201443 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr18-245 chr18 62038206 62038416 + 11.4 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -145304 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr2-3361 chr2 237408711 237408921 + 11.4 0.000 intron (NM_057165, intron 1 of 7) intron (NM_057165, intron 1 of 7) 5348 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr9-2098 chr9 87554285 87554495 + 11.4 0.000 TTS (NR_146781) TTS (NR_146781) 936 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr3-2359 chr3 157906877 157907087 + 11.4 0.000 Intergenic Intergenic 199181 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr20-947 chr20 32110149 32110359 + 11.4 0.000 intron (NM_001363731, intron 1 of 17) intron (NM_001363731, intron 1 of 17) 526 NM_001363731 9777 Hs.654665 NM_014742 ENSG00000101337 TM9SF4 dJ836N17.2 transmembrane 9 superfamily member 4 protein-coding chr1-3535 chr1 208216035 208216245 + 11.4 0.000 intron (NM_025179, intron 2 of 31) L2a|LINE|L2 28244 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr16-1890 chr16 85888734 85888944 + 11.4 0.000 Intergenic Intergenic -10323 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr1-9503 chr1 37714672 37714882 + 11.4 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 22261 NM_018101 55143 Hs.524571 NM_018101 ENSG00000134690 CDCA8 BOR|BOREALIN|DasraB|MESRGP cell division cycle associated 8 protein-coding chr3-2502 chr3 195179705 195179915 + 11.4 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 31939 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr17-3006 chr17 75412774 75412984 + 11.4 0.000 Intergenic Intergenic 6810 NR_037449 100500841 NR_037449 ENSG00000264511 MIR3678 mir-3678 microRNA 3678 ncRNA chr17-2912 chr17 43834052 43834262 + 11.4 0.000 promoter-TSS (NM_001330233) promoter-TSS (NM_001330233) -963 NM_001330233 4356 Hs.396566 NM_001932 ENSG00000161647 MPP3 DLG3 membrane palmitoylated protein 3 protein-coding chr12-3155 chr12 48351139 48351349 + 11.4 0.000 promoter-TSS (NM_152320) promoter-TSS (NM_152320) 2 NM_001172682 121274 Hs.23492 NM_152320 ENSG00000167528 ZNF641 - zinc finger protein 641 protein-coding chr17-2466 chr17 48241372 48241582 + 11.4 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -52870 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chrX-2565 chrX 101596080 101596290 + 11.4 0.000 Intergenic Intergenic 21815 NM_019007 54470 Hs.83530 NM_019007 ENSG00000198960 ARMCX6 GASP10 armadillo repeat containing X-linked 6 protein-coding chr17-2533 chr17 29911768 29911978 + 11.4 0.000 intron (NM_001282129, intron 1 of 15) intron (NM_001282129, intron 1 of 15) -18030 NM_001145053 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr2-2219 chr2 127654657 127654867 + 11.4 0.000 intron (NM_001136037, intron 4 of 10) (CCCCCTG)n|Simple_repeat|Simple_repeat -6509 NM_001256542 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr4-3900 chr4 146398427 146398637 + 11.4 0.000 intron (NM_001317816, intron 4 of 10) intron (NM_001317816, intron 4 of 10) -10051 NR_107003 102465837 NR_107003 ENSG00000278438 MIR7849 hsa-mir-7849 microRNA 7849 ncRNA chrX-3984 chrX 14162350 14162560 + 11.4 0.000 Intergenic HAL1M8|LINE|L1 -81810 NR_110506 286480 Hs.567831 NR_110506 UBE2E4P UbcM2 ubiquitin conjugating enzyme E2 E4 pseudogene pseudo chr9-2268 chr9 109052471 109052681 + 11.4 0.000 intron (NM_032012, intron 12 of 17) L3|LINE|CR1 -6278 NR_029506 407036 NR_029506 ENSG00000207698 MIR32 MIRN32|hsa-mir-32|miR-32|miRNA32 microRNA 32 ncRNA chr10-4654 chr10 125560076 125560286 + 11.4 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -14190 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr5-1428 chr5 1542183 1542393 + 11.4 0.000 Intergenic Intergenic -18328 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr12-2406 chr12 46562845 46563055 + 11.4 0.000 intron (NR_125380, intron 3 of 3) L2b|LINE|L2 178843 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr16-1721 chr16 48317625 48317835 + 11.4 0.000 intron (NM_031490, intron 11 of 14) intron (NM_031490, intron 11 of 14) 48157 NM_001006610 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr5-2942 chr5 145350496 145350706 + 11.4 0.000 Intergenic Intergenic 484741 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr13-895 chr13 41645257 41645467 + 11.4 0.000 intron (NM_015058, intron 37 of 44) intron (NM_015058, intron 37 of 44) -76967 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr15-1916 chr15 80068708 80068918 + 11.4 0.000 intron (NM_001242914, intron 1 of 6) MER33|DNA|hAT-Charlie -3748 NM_001242916 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr1-5369 chr1 245096051 245096261 + 11.4 0.000 intron (NM_001143943, intron 6 of 6) intron (NM_001143943, intron 6 of 6) -58829 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr11-2633 chr11 30481766 30481976 + 11.4 0.000 intron (NM_001584, intron 3 of 5) intron (NM_001584, intron 3 of 5) 98622 NM_001584 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr7-2833 chr7 101005236 101005446 + 11.4 0.000 exon (NM_001164462, exon 2 of 12) exon (NM_001164462, exon 2 of 12) 12267 NR_120519 102724094 Hs.571256 NR_120519 ENSG00000227053 LOC102724094 - uncharacterized LOC102724094 ncRNA chr15-3129 chr15 65871056 65871266 + 11.4 0.000 intron (NM_004663, intron 1 of 4) intron (NM_004663, intron 1 of 4) 1670 NM_001206836 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr19-3754 chr19 51169293 51169503 + 11.4 0.000 intron (NR_047529, intron 4 of 6) LTR13|LTR|ERVK 2070 NR_047529 284367 Hs.132045 NR_002804 ENSG00000171101 SIGLEC17P HSPC078|SIGLECP2|SIGLECP3 sialic acid binding Ig like lectin 17, pseudogene pseudo chr1-4000 chr1 162710333 162710543 + 11.4 0.000 intron (NM_001014796, intron 3 of 18) intron (NM_001014796, intron 3 of 18) 77974 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr2-1759 chr2 112137892 112138102 + 11.4 0.000 promoter-TSS (NM_153214) promoter-TSS (NM_153214) -388 NM_001128165 129804 Hs.437696 NM_153214 ENSG00000144152 FBLN7 TM14 fibulin 7 protein-coding chr3-3512 chr3 21423528 21423738 + 11.4 0.000 intron (NM_024697, intron 7 of 7) intron (NM_024697, intron 7 of 7) 17907 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr7-9171 chr7 114353824 114354034 + 11.4 0.000 intron (NR_033766, intron 2 of 19) MLT2B1|LTR|ERVL -60886 NM_014491 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr14-3136 chr14 68140496 68140706 + 11.3 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 317009 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr13-2267 chr13 27395706 27395916 + 11.3 0.000 Intergenic Intergenic -28808 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr3-10049 chr3 104885416 104885626 + 11.3 0.000 Intergenic Intergenic -481192 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr16-1999 chr16 898905 899115 + 11.3 0.000 intron (NR_147885, intron 4 of 11) intron (NR_147885, intron 4 of 11) -22023 NR_110946 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr9-2750 chr9 99211735 99211945 + 11.3 0.000 Intergenic L1MA4A|LINE|L1 10102 NR_024532 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2 alpha-1,3/1,6-mannosyltransferase protein-coding chr7-4424 chr7 106313566 106313776 + 11.3 0.000 Intergenic Intergenic -28688 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chrX-1861 chrX 115410854 115411064 + 11.3 0.000 Intergenic MER72|LTR|ERV1 121244 NM_016383 51213 Hs.242183 NM_016383 ENSG00000102021 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding chr14-1314 chr14 59688446 59688656 + 11.3 0.000 intron (NM_021136, intron 3 of 8) L1PA15-16|LINE|L1 -41531 NR_049851 100847088 NR_049851 ENSG00000263629 MIR5586 - microRNA 5586 ncRNA chr7-3177 chr7 100202870 100203080 + 11.3 0.000 intron (NM_178831, intron 4 of 4) L2a|LINE|L2 -16273 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr7-3500 chr7 4678581 4678791 + 11.3 0.000 Intergenic Intergenic -3609 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr20-2538 chr20 35586347 35586557 + 11.3 0.000 intron (NR_119376, intron 21 of 42) intron (NR_119376, intron 21 of 42) 21110 NR_119376 80307 Hs.72222 NR_001442 ENSG00000088340 FER1L4 C20orf124 fer-1 like family member 4 (pseudogene) pseudo chr9-5673 chr9 123395573 123395783 + 11.3 0.000 intron (NM_001352965, intron 18 of 20) intron (NM_001352965, intron 18 of 20) 6925 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr3-5151 chr3 57312001 57312211 + 11.3 0.000 intron (NM_001366028, intron 66 of 73) intron (NM_001366028, intron 66 of 73) -19421 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chr11-8269 chr11 68653306 68653516 + 11.3 0.000 Intergenic Intergenic -31133 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr13-1612 chr13 46738218 46738428 + 11.3 0.000 intron (NM_001164213, intron 18 of 18) intron (NM_001164213, intron 18 of 18) 58838 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr14-3704 chr14 104695515 104695725 + 11.3 0.000 intron (NM_032714, intron 1 of 4) intron (NM_032714, intron 1 of 4) 6002 NM_001031714 64423 Hs.24956 NM_022489 ENSG00000203485 INF2 C14orf151|C14orf173|CMTDIE|FSGS5|pp9484 inverted formin, FH2 and WH2 domain containing protein-coding chr9-4881 chr9 4569226 4569436 + 11.3 0.000 intron (NM_004170, intron 6 of 11) MER46C|DNA|TcMar-Tigger 78863 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr3-2422 chr3 196757951 196758161 + 11.3 0.000 intron (NM_002577, intron 1 of 14) intron (NM_002577, intron 1 of 14) 18199 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr22-860 chr22 36081209 36081419 + 11.3 0.000 Intergenic Intergenic -52490 NM_001082578 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr2-7528 chr2 21374602 21374812 + 11.3 0.000 Intergenic Intergenic 250721 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr3-1502 chr3 129225097 129225307 + 11.3 0.000 Intergenic Intergenic -24404 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding chr1-9131 chr1 18618625 18618835 + 11.3 0.000 Intergenic L1ME4a|LINE|L1 -12116 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr17-1979 chr17 41835499 41835709 + 11.3 0.000 promoter-TSS (NM_001329595) promoter-TSS (NM_001329595) -81 NM_001329595 317719 Hs.127510 NM_152467 ENSG00000161594 KLHL10 SPGF11 kelch like family member 10 protein-coding chr1-5734 chr1 91885476 91885686 + 11.3 0.000 intron (NM_001195684, intron 2 of 17) CpG 570 NR_036634 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr10-5553 chr10 87760604 87760814 + 11.3 0.000 intron (NR_135914, intron 8 of 10) intron (NR_135914, intron 8 of 10) 57522 NM_001321969 84896 Hs.435948 NM_032810 ENSG00000138138 ATAD1 AFDC1|FNP001|HKPX4|THORASE ATPase family AAA domain containing 1 protein-coding chr1-4571 chr1 89203240 89203450 + 11.3 0.000 Intergenic Intergenic -4403 NM_052941 115361 Hs.409925 NM_052941 ENSG00000162654 GBP4 Mpa2 guanylate binding protein 4 protein-coding chr8-3254 chr8 144181423 144181633 + 11.3 0.000 intron (NM_001099281, intron 6 of 11) intron (NM_001099281, intron 6 of 11) 32883 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr11-6751 chr11 83372495 83372705 + 11.3 0.000 Intergenic Intergenic -86193 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr3-1782 chr3 14414699 14414909 + 11.3 0.000 intron (NR_103507, intron 1 of 13) AluJr|SINE|Alu 12198 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr17-1913 chr17 71045101 71045311 + 11.3 0.000 Intergenic A-rich|Low_complexity|Low_complexity 156973 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr7-7967 chr7 13031441 13031651 + 11.3 0.000 Intergenic Intergenic 343913 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr18-1054 chr18 14332335 14332545 + 11.3 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -4983 NR_026756 284233 Hs.607579 NR_026756 ENSG00000265787 CYP4F35P - cytochrome P450 family 4 subfamily F member 35, pseudogene pseudo chr3-7088 chr3 179221033 179221243 + 11.3 0.000 exon (NM_006218, exon 14 of 21) exon (NM_006218, exon 14 of 21) 30477 NM_014407 27094 Hs.591285 NM_014407 ENSG00000171121 KCNMB3 BKBETA3|HBETA3|K(VCA)BETA-3|KCNMB2|KCNMBL|SLO-BETA-3|SLOBETA3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 protein-coding chr16-3089 chr16 67059409 67059619 + 11.3 0.000 intron (NM_001368708, intron 3 of 4) Charlie4z|DNA|hAT-Charlie 30365 NM_001368710 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding chr6-4490 chr6 36723424 36723634 + 11.3 0.000 intron (NM_001257357, intron 9 of 13) intron (NM_001257357, intron 9 of 13) 25703 NM_001257357 401258 Hs.485258 NM_207498 ENSG00000255587 RAB44 RASD3|RASL13|dJ431A14.3 RAB44, member RAS oncogene family protein-coding chr9-5533 chr9 108093591 108093801 + 11.3 0.000 Intergenic Intergenic -603927 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr1-5073 chr1 103250458 103250668 + 11.3 0.000 Intergenic LTR33A_|LTR|ERVL -142041 NM_080630 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr21-1087 chr21 33011503 33011713 + 11.3 0.000 Intergenic Intergenic -14327 NM_005806 10215 Hs.176977 NM_005806 ENSG00000205927 OLIG2 BHLHB1|OLIGO2|PRKCBP2|RACK17|bHLHe19 oligodendrocyte transcription factor 2 protein-coding chr2-8031 chr2 70945853 70946063 + 11.3 0.000 intron (NM_001692, intron 2 of 13) intron (NM_001692, intron 2 of 13) 2653 NR_110274 101927750 Hs.676120 NR_110273 ENSG00000239322 ATP6V1B1-AS1 - ATP6V1B1 antisense RNA 1 ncRNA chr6-1784 chr6 108557309 108557519 + 11.3 0.000 Intergenic Intergenic -2411 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr9-3154 chr9 111456575 111456785 + 11.3 0.000 intron (NM_001363756, intron 1 of 48) intron (NM_001363756, intron 1 of 48) 26882 NM_001364931 23392 Hs.368255 NM_001080398 ENSG00000136813 ECPAS ECM29|KIAA0368 Ecm29 proteasome adaptor and scaffold protein-coding chr18-2273 chr18 75439296 75439506 + 11.3 0.000 Intergenic Intergenic -11698 NM_001037331 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr5-7930 chr5 79156956 79157166 + 11.3 0.000 Intergenic Intergenic 45252 NM_001713 635 Hs.80756 NM_001713 ENSG00000145692 BHMT BHMT1|HEL-S-61p betaine--homocysteine S-methyltransferase protein-coding chr12-4703 chr12 49491226 49491436 + 11.3 0.000 intron (NM_001293285, intron 7 of 14) intron (NM_001293285, intron 7 of 14) -47699 NM_001314030 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr22-1040 chr22 38494570 38494780 + 11.3 0.000 exon (NM_001098504, exon 8 of 13) exon (NM_001098504, exon 8 of 13) 11636 NM_006386 10521 Hs.528305 NM_006386 ENSG00000100201 DDX17 P72|RH70 DEAD-box helicase 17 protein-coding chr11-1935 chr11 76807391 76807601 + 11.3 0.000 Intergenic Intergenic 15744 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr20-566 chr20 4824190 4824400 + 11.3 0.000 promoter-TSS (NM_014737) promoter-TSS (NM_014737) -687 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr7-8761 chr7 78499246 78499456 + 11.3 0.000 intron (NM_001301128, intron 5 of 20) intron (NM_001301128, intron 5 of 20) 152109 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr5-1469 chr5 77168026 77168236 + 11.3 0.000 Intergenic Intergenic -12173 NM_001349752 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr9-1722 chr9 113178127 113178337 + 11.3 0.000 intron (NM_015258, intron 20 of 27) intron (NM_015258, intron 20 of 27) 27225 NM_001860 1318 Hs.24030 NM_001860 ENSG00000136867 SLC31A2 COPT2|CTR2|hCTR2 solute carrier family 31 member 2 protein-coding chr20-632 chr20 45891361 45891571 + 11.3 0.000 promoter-TSS (NM_001278535) promoter-TSS (NM_001278535) -179 NM_080749 140825 Hs.517094 NM_080749 ENSG00000124257 NEURL2 C20orf163|OZZ|OZZ-E3 neuralized E3 ubiquitin protein ligase 2 protein-coding chr3-5014 chr3 27686653 27686863 + 11.3 0.000 Intergenic Intergenic 35565 NM_001278182 8320 Hs.591663 NM_005442 ENSG00000163508 EOMES TBR2 eomesodermin protein-coding chr19-4822 chr19 35852443 35852653 + 11.3 0.000 promoter-TSS (NM_004646) promoter-TSS (NM_004646) -555 NM_004646 4868 Hs.122186 NM_004646 ENSG00000161270 NPHS1 CNF|NPHN|nephrin NPHS1 adhesion molecule, nephrin protein-coding chr6-2068 chr6 116777514 116777724 + 11.3 0.000 Intergenic L1PB2|LINE|L1 -11900 NM_001085480 221303 Hs.126712 NM_001085480 ENSG00000183807 FAM162B C6orf189|bA86F4.2 family with sequence similarity 162 member B protein-coding chr2-8901 chr2 179749309 179749519 + 11.3 0.000 intron (NM_001352809, intron 3 of 10) intron (NM_001352809, intron 3 of 10) -2904 NM_001352815 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr10-1885 chr10 103548777 103548987 + 11.3 0.000 intron (NM_004210, intron 1 of 5) intron (NM_004210, intron 1 of 5) -31440 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr3-4738 chr3 72819005 72819215 + 11.3 0.000 intron (NM_018130, intron 6 of 10) MLT1E1A|LTR|ERVL-MaLR 29335 NM_018130 55164 Hs.606584 NM_018130 ENSG00000144736 SHQ1 GRIM-1|Shq1p SHQ1, H/ACA ribonucleoprotein assembly factor protein-coding chr8-3350 chr8 41648227 41648437 + 11.3 0.000 promoter-TSS (NM_152568) promoter-TSS (NM_152568) -973 NM_152568 157848 NM_152568 ENSG00000165066 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding chr2-6830 chr2 65853422 65853632 + 11.3 0.000 Intergenic MIRb|SINE|MIR -420928 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr5-6741 chr5 77170198 77170408 + 11.3 0.000 Intergenic L2c|LINE|L2 -10001 NM_001349752 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr2-5691 chr2 204406730 204406940 + 11.3 0.000 Intergenic Intergenic -138640 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr7-2714 chr7 31122656 31122866 + 11.3 0.000 Intergenic Intergenic 70300 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr1-10942 chr1 211959179 211959389 + 11.3 0.000 intron (NM_015434, intron 16 of 19) L1PREC2|LINE|L1 -76269 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr4-4803 chr4 105496196 105496406 + 11.3 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -22231 NM_006903 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chr11-2953 chr11 75031334 75031544 + 11.3 0.000 Intergenic L2|LINE|L2 42506 NM_001367862 10825 Hs.191074 NM_006656 ENSG00000162139 NEU3 SIAL3 neuraminidase 3 protein-coding chr1-10585 chr1 175681715 175681925 + 11.3 0.000 intron (NM_003285, intron 1 of 22) G-rich|Low_complexity|Low_complexity 61775 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr7-5841 chr7 87206587 87206797 + 11.3 0.000 intron (NR_138030, intron 1 of 3) MER44B|DNA|TcMar-Tigger 13040 NM_024315 79161 Hs.619593 NM_024315 ENSG00000135185 TMEM243 C7orf23|MM-TRAG|MMTRAG transmembrane protein 243 protein-coding chr22-1836 chr22 37483566 37483776 + 11.3 0.000 intron (NM_002405, intron 1 of 7) AluSz6|SINE|Alu 2713 NM_002405 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr2-7472 chr2 15537270 15537480 + 11.3 0.000 intron (NR_052013, intron 7 of 50) MER34A|LTR|ERV1 23959 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr14-1214 chr14 86022505 86022715 + 11.3 0.000 intron (NR_110155, intron 1 of 3) intron (NR_110155, intron 1 of 3) 87932 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr19-3706 chr19 34773256 34773466 + 11.3 0.000 promoter-TSS (NM_001007248) promoter-TSS (NM_001007248) -146 NM_001007248 148103 Hs.590961 NM_001007247 ENSG00000153896 ZNF599 - zinc finger protein 599 protein-coding chr10-2973 chr10 71570720 71570930 + 11.3 0.000 exon (NM_001171931, exon 8 of 25) exon (NM_001171931, exon 8 of 25) -58905 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr11-10176 chr11 94073398 94073608 + 11.3 0.000 intron (NM_001098672, intron 8 of 19) MIRb|SINE|MIR 52149 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chr4-3867 chr4 136299867 136300077 + 11.3 0.000 Intergenic Intergenic -386292 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr10-5309 chr10 70462969 70463179 + 11.3 0.000 Intergenic Intergenic -15126 NM_001329906 4838 Hs.370414 NM_018055 ENSG00000156574 NODAL HTX5 nodal growth differentiation factor protein-coding chr12-2391 chr12 29317904 29318114 + 11.3 0.000 promoter-TSS (NR_103860) promoter-TSS (NR_103860) -161 NR_103860 100506606 Hs.298851 NR_103860 ENSG00000257176 LOC100506606 - uncharacterized LOC100506606 ncRNA chr6-1089 chr6 57221754 57221964 + 11.3 0.000 promoter-TSS (NM_001278668) promoter-TSS (NM_001278668) -398 NM_183227 51715 Hs.555016 NM_016277 ENSG00000112210 RAB23 HSPC137 RAB23, member RAS oncogene family protein-coding chr6-4972 chr6 106608316 106608526 + 11.3 0.000 intron (NM_032730, intron 4 of 8) L1MA5|LINE|L1 21077 NM_032730 84816 Hs.155839 NM_032730 ENSG00000130347 RTN4IP1 NIMP|OPA10 reticulon 4 interacting protein 1 protein-coding chr3-4229 chr3 138220274 138220484 + 11.3 0.000 intron (NM_213654, intron 3 of 12) intron (NM_213654, intron 3 of 12) 32848 NM_001267042 25852 Hs.744868 NM_014154 ENSG00000114098 ARMC8 GID5|HSPC056|S863-2|VID28 armadillo repeat containing 8 protein-coding chr11-6985 chr11 116414046 116414256 + 11.3 0.000 Intergenic Intergenic -225271 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr3-4392 chr3 194985199 194985409 + 11.3 0.000 Intergenic LTR50|LTR|ERVL -109284 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr19-3840 chr19 15114889 15115099 + 11.3 0.000 TTS (NM_001300910) TTS (NM_001300910) 7593 NM_033025 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding chr5-435 chr5 85915989 85916199 + 11.3 0.000 Intergenic L1M4|LINE|L1 -366350 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr2-3068 chr2 102304697 102304907 + 11.3 0.000 Intergenic Intergenic -6700 NM_001282408 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr16-6003 chr16 7937759 7937969 + 11.3 0.000 Intergenic Intergenic 605019 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr7-3434 chr7 156988903 156989113 + 11.3 0.000 Intergenic Intergenic -17299 NR_147077 105375606 Hs.606605 NR_147077 ENSG00000235029 MNX1-AS2 - MNX1 antisense RNA 2 ncRNA chr5-7605 chr5 43762339 43762549 + 11.3 0.000 Intergenic L1M1|LINE|L1 -159214 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr12-2445 chr12 52670626 52670836 + 11.3 0.000 Intergenic Intergenic 9676 NM_006121 3848 Hs.80828 NM_006121 ENSG00000167768 KRT1 CK1|EHK|EHK1|EPPK|K1|KRT1A|NEPPK keratin 1 protein-coding chr8-3180 chr8 101192212 101192422 + 11.3 0.000 Intergenic L3|LINE|CR1 13356 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr10-5170 chr10 58201840 58202050 + 11.3 0.000 intron (NM_152230, intron 4 of 5) Tigger1|DNA|TcMar-Tigger 65949 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr5-5237 chr5 117912187 117912397 + 11.3 0.000 intron (NR_104997, intron 1 of 2) LTR9|LTR|ERV1 181931 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr6-2198 chr6 37453073 37453283 + 11.3 0.000 intron (NM_015050, intron 7 of 23) intron (NM_015050, intron 7 of 23) 19957 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr4-2078 chr4 22417822 22418032 + 11.3 0.000 intron (NM_145290, intron 12 of 18) intron (NM_145290, intron 12 of 18) -78261 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr12-3311 chr12 80273185 80273395 + 11.3 0.000 intron (NM_001368062, intron 29 of 62) intron (NM_001368062, intron 29 of 62) 63837 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr11-4097 chr11 33558162 33558372 + 11.3 0.000 intron (NM_012194, intron 6 of 20) intron (NM_012194, intron 6 of 20) 142473 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr7-2875 chr7 120792083 120792293 + 11.3 0.000 intron (NM_012338, intron 7 of 7) L1M4|LINE|L1 65956 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr1-6831 chr1 97655456 97655666 + 11.3 0.000 intron (NM_000110, intron 8 of 22) (TTTGCT)n|Simple_repeat|Simple_repeat -141360 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr3-3089 chr3 136668583 136668793 + 11.3 0.000 intron (NM_005862, intron 1 of 33) LTR16B1|LTR|ERVL 83690 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr18-1241 chr18 50060812 50061022 + 11.3 0.000 intron (NM_001080467, intron 1 of 39) MER5B|DNA|hAT-Charlie 65646 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr12-2715 chr12 127230935 127231145 + 11.3 0.000 Intergenic LTR8|LTR|ERV1 53243 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr5-5524 chr5 144143129 144143339 + 11.3 0.000 Intergenic Intergenic 27425 NM_001271732 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding chr7-4931 chr7 134712310 134712520 + 11.3 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 65562 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr6-1631 chr6 107493427 107493637 + 11.3 0.000 intron (NM_018013, intron 1 of 6) intron (NM_018013, intron 1 of 6) 3415 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr11-2584 chr11 122640874 122641084 + 11.3 0.000 Intergenic AluJb|SINE|Alu -14743 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr5-1378 chr5 95810980 95811190 + 11.3 0.000 Intergenic LTR5B|LTR|ERVK 11641 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr2-8986 chr2 191385110 191385320 + 11.3 0.000 intron (NM_012223, intron 15 of 28) intron (NM_012223, intron 15 of 28) 139811 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr10-5335 chr10 71486993 71487203 + 11.3 0.000 intron (NM_052836, intron 3 of 12) L2b|LINE|L2 24822 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA KI270719.1-3 KI270719.1 150104 150314 + 11.3 0.000 NA NA NA NA chr7-4142 chr7 75890432 75890642 + 11.3 0.000 Intergenic AluSz|SINE|Alu 11503 NM_001040456 57414 Hs.488827 NM_020684 ENSG00000005486 RHBDD2 NPD007|RHBDL7 rhomboid domain containing 2 protein-coding chr11-1975 chr11 14411891 14412101 + 11.3 0.000 Intergenic Intergenic -47490 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr5-5148 chr5 107073856 107074066 + 11.3 0.000 Intergenic Intergenic -62947 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr19-6425 chr19 15394141 15394351 + 11.3 0.000 intron (NM_001291478, intron 12 of 13) L1MB7|LINE|L1 -14459 NM_005858 10270 Hs.594496 NM_005858 ENSG00000105127 AKAP8 AKAP 95|AKAP-8|AKAP-95|AKAP95 A-kinase anchoring protein 8 protein-coding chr9-3620 chr9 89011598 89011808 + 11.3 0.000 3' UTR (NM_016848, exon 12 of 12) 3' UTR (NM_016848, exon 12 of 12) 20235 NM_005226 1903 Hs.585118 NM_005226 ENSG00000213694 S1PR3 EDG-3|EDG3|LPB3|S1P3 sphingosine-1-phosphate receptor 3 protein-coding chr9-1255 chr9 95313161 95313371 + 11.3 0.000 intron (NM_001243744, intron 1 of 13) CpG 3988 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr11-3556 chr11 33682360 33682570 + 11.3 0.000 Intergenic L1PB1|LINE|L1 18275 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr5-8127 chr5 99110328 99110538 + 11.3 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -180719 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chrX-733 chrX 154490043 154490253 + 11.3 0.000 intron (NM_001142391, intron 2 of 3) intron (NM_001142391, intron 2 of 3) 481 NM_019848 8273 Hs.522826 NM_019848 ENSG00000126903 SLC10A3 DXS253E|P3 solute carrier family 10 member 3 protein-coding chr18-2087 chr18 49290643 49290853 + 11.3 0.000 intron (NM_001353214, intron 8 of 17) intron (NM_001353214, intron 8 of 17) 169897 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr5-8477 chr5 132589882 132590092 + 11.3 0.000 intron (NM_005732, intron 9 of 24) intron (NM_005732, intron 9 of 24) 33010 NM_005732 10111 Hs.633509 NM_005732 ENSG00000113522 RAD50 NBSLD|RAD502|hRad50 RAD50 double strand break repair protein protein-coding chr6-2988 chr6 41743749 41743959 + 11.3 0.000 intron (NM_001166424, intron 3 of 6) intron (NM_001166424, intron 3 of 6) 3543 NM_002630 5225 Hs.1867 NM_002630 ENSG00000096088 PGC PEPC|PGII progastricsin protein-coding chrX-816 chrX 84771194 84771404 + 11.3 0.000 Intergenic MIRc|SINE|MIR -162852 NR_024062 100131816 Hs.460809 NM_178567 ENSG00000229547 UBE2DNL - ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene) pseudo chr8-1597 chr8 142581244 142581454 + 11.3 0.000 Intergenic Intergenic 33130 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr11-5501 chr11 82165594 82165804 + 11.3 0.000 intron (NR_120571, intron 3 of 7) intron (NR_120571, intron 3 of 7) 238214 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr3-3710 chr3 174325932 174326142 + 11.3 0.000 Intergenic Intergenic -405241 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr18-1976 chr18 38872930 38873140 + 11.3 0.000 Intergenic LTR78|LTR|ERV1 749140 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr12-4162 chr12 86462402 86462612 + 11.3 0.000 intron (NM_013244, intron 1 of 6) MLT2A2|LTR|ERVL -205208 NM_001351287 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding chr7-1657 chr7 74874844 74875054 + 11.3 0.000 Intergenic Intergenic 15663 NR_040584 442582 Hs.632310 NM_001025202 STAG3L2 STAG3L1|STAG3L2P|STAG3L3 stromal antigen 3-like 2 (pseudogene) pseudo chr12-2497 chr12 79453758 79453968 + 11.3 0.000 Intergenic Intergenic 34606 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr4-2368 chr4 6532810 6533020 + 11.3 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) 22700 NM_001206995 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr3-6661 chr3 129253517 129253727 + 11.3 0.000 intron (NM_016128, intron 5 of 23) L2c|LINE|L2 4016 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding chr1-5230 chr1 198919045 198919255 + 11.3 0.000 intron (NR_040073, intron 1 of 2) Tigger1|DNA|TcMar-Tigger 18279 NR_040073 100131234 Hs.711077 NR_040073 MIR181A1HG - MIR181A1 host gene ncRNA chr12-3278 chr12 69398046 69398256 + 11.3 0.000 Intergenic L1MB7|LINE|L1 38408 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding chr1-10417 chr1 157645673 157645883 + 11.3 0.000 Intergenic Intergenic -47693 NM_031282 83417 Hs.120260 NM_031282 ENSG00000163518 FCRL4 CD307d|FCRH4|IGFP2|IRTA1 Fc receptor like 4 protein-coding chr1-3989 chr1 156746924 156747134 + 11.3 0.000 intron (NM_001319186, intron 1 of 5) intron (NM_001319186, intron 1 of 5) 4264 NM_001319187 3068 Hs.743948 NM_004494 ENSG00000143321 HDGF HMG1L2 heparin binding growth factor protein-coding chr4-3660 chr4 27138937 27139147 + 11.3 0.000 Intergenic MER1A|DNA|hAT-Charlie -78437 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr4-1812 chr4 56909352 56909562 + 11.3 0.000 5' UTR (NM_001363453, exon 1 of 4) 5' UTR (NM_001363453, exon 1 of 4) 544 NM_001193508 5978 Hs.307836 NM_005612 ENSG00000084093 REST DFNA27|GINGF5|HGF5|NRSF|WT6|XBR RE1 silencing transcription factor protein-coding chr17-5401 chr17 33480877 33481087 + 11.3 0.000 intron (NM_001094, intron 1 of 9) L2|LINE|L2 52778 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr15-1996 chr15 42605297 42605507 + 11.3 0.000 intron (NM_020759, intron 3 of 32) intron (NM_020759, intron 3 of 32) 29796 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr6-1372 chr6 75935120 75935330 + 11.3 0.000 intron (NM_001563, intron 14 of 16) intron (NM_001563, intron 14 of 16) 137437 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr18-1399 chr18 72352177 72352387 + 11.3 0.000 Intergenic Intergenic 192060 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr17-3498 chr17 50211734 50211944 + 11.3 0.000 Intergenic Intergenic -2855 NR_110806 101927230 Hs.514326 NR_110806 LINC01969 - long intergenic non-protein coding RNA 1969 ncRNA chr12-1818 chr12 8658385 8658595 + 11.3 0.000 intron (NM_001297710, intron 2 of 7) intron (NM_001297710, intron 2 of 7) 4336 NR_123733 8076 Hs.512842 NM_003480 ENSG00000197614 MFAP5 AAT9|MAGP-2|MAGP2|MFAP-5|MP25 microfibril associated protein 5 protein-coding chr2-8159 chr2 84735507 84735717 + 11.3 0.000 intron (NM_001370, intron 62 of 76) L1PA17|LINE|L1 145472 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chrX-2510 chrX 94856683 94856893 + 11.3 0.000 Intergenic L1PB1|LINE|L1 206438 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr7-3032 chr7 99396208 99396418 + 11.3 0.000 3' UTR (NM_014891, exon 6 of 6) 3' UTR (NM_014891, exon 6 of 6) 12284 NM_014891 11333 Hs.632296 NM_014891 ENSG00000106244 PDAP1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding chr7-5455 chr7 39697082 39697292 + 11.3 0.000 intron (NM_005402, intron 4 of 4) intron (NM_005402, intron 4 of 4) -36381 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr8-1507 chr8 66114611 66114821 + 11.3 0.000 Intergenic Intergenic -12413 NM_184087 84675 Hs.85524 NM_033058 ENSG00000147573 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding chr11-3760 chr11 46701698 46701908 + 11.3 0.000 intron (NM_024741, intron 2 of 4) intron (NM_024741, intron 2 of 4) 772 NM_001184751 79797 Hs.656931 NM_024741 ENSG00000175213 ZNF408 EVR6|RP72 zinc finger protein 408 protein-coding chr18-1992 chr18 40302395 40302605 + 11.3 0.000 Intergenic L1PA17|LINE|L1 236214 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr12-2802 chr12 106074619 106074829 + 11.3 0.000 intron (NM_014840, intron 4 of 6) intron (NM_014840, intron 4 of 6) 65309 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr6-1940 chr6 106310052 106310262 + 11.3 0.000 intron (NR_104402, intron 1 of 5) L2a|LINE|L2 6109 NR_104403 9474 Hs.486063 NM_004849 ENSG00000057663 ATG5 APG5|APG5-LIKE|APG5L|ASP|SCAR25|hAPG5 autophagy related 5 protein-coding chrX-2752 chrX 129493608 129493818 + 11.3 0.000 intron (NM_003069, intron 12 of 24) MIRb|SINE|MIR 29777 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr4-4213 chr4 15652654 15652864 + 11.3 0.000 intron (NR_036464, intron 1 of 11) intron (NR_036464, intron 1 of 11) 2598 NM_012161 26234 Hs.643433 NM_012161 ENSG00000118564 FBXL5 FBL4|FBL5|FLR1 F-box and leucine rich repeat protein 5 protein-coding chr18-2155 chr18 57726290 57726500 + 11.3 0.000 intron (NM_005603, intron 2 of 27) L1M1|LINE|L1 76920 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr14-2129 chr14 76672030 76672240 + 11.3 0.000 Intergenic Intergenic -89333 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr5-1704 chr5 111073287 111073497 + 11.3 0.000 promoter-TSS (NM_138551) promoter-TSS (NM_138551) 18 NM_138551 85480 Hs.389874 NM_033035 ENSG00000145777 TSLP - thymic stromal lymphopoietin protein-coding chr17-2313 chr17 45143901 45144111 + 11.3 0.000 3' UTR (NM_001321352, exon 12 of 12) 3' UTR (NM_001321352, exon 12 of 12) -3311 NM_006460 10614 Hs.586945 NM_006460 ENSG00000186834 HEXIM1 CLP1|EDG1|HIS1|MAQ1 HEXIM P-TEFb complex subunit 1 protein-coding chr5-2447 chr5 132771443 132771653 + 11.3 0.000 intron (NM_001098813, intron 1 of 9) intron (NM_001098813, intron 1 of 9) 5691 NM_001098812 23176 Hs.522057 NM_015146 ENSG00000164402 SEPTIN8 SEP2|SEPT8 septin 8 protein-coding chr9-8221 chr9 109526796 109527006 + 11.3 0.000 Intergenic L1ME3|LINE|L1 -15356 NR_037493 100500898 NR_037493 ENSG00000263861 MIR3927 - microRNA 3927 ncRNA chr7-4678 chr7 39543195 39543405 + 11.3 0.000 Intergenic MIR|SINE|MIR -23104 NM_001282446 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr18-1283 chr18 60276659 60276869 + 11.3 0.000 Intergenic Intergenic 96011 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr7-5255 chr7 19079238 19079448 + 11.3 0.000 Intergenic L1MEc|LINE|L1 38293 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr11-3739 chr11 32793023 32793233 + 11.3 0.000 intron (NM_001008391, intron 1 of 17) intron (NM_001008391, intron 1 of 17) 1530 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr10-5213 chr10 62166289 62166499 + 11.3 0.000 Intergenic Intergenic 102450 NM_001282941 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding chr15-1551 chr15 68202204 68202414 + 11.3 0.000 intron (NM_001286694, intron 1 of 3) MER63D|DNA|hAT-Blackjack 3801 NM_001031733 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr13-2107 chr13 85386416 85386626 + 11.3 0.000 intron (NR_046989, intron 1 of 3) intron (NR_046989, intron 1 of 3) 22918 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr11-3304 chr11 100787608 100787818 + 11.3 0.000 intron (NM_001367945, intron 2 of 25) intron (NM_001367945, intron 2 of 25) -99758 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr6-1735 chr6 42100491 42100701 + 11.3 0.000 TTS (NM_001164446) TTS (NM_001164446) 42024 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr2-4344 chr2 240712097 240712307 + 11.3 0.000 Intergenic Intergenic 20336 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr8-3300 chr8 24490432 24490642 + 11.3 0.000 intron (NR_125809, intron 4 of 4) intron (NR_125809, intron 4 of 4) 24331 NR_125809 101929315 Hs.125562 NR_125809 ENSG00000253643 LOC101929315 - uncharacterized LOC101929315 ncRNA chr1-10971 chr1 214394687 214394897 + 11.3 0.000 intron (NM_005401, intron 9 of 18) intron (NM_005401, intron 9 of 18) 113633 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr3-4525 chr3 117281524 117281734 + 11.3 0.000 Intergenic Intergenic 360198 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr21-637 chr21 46296373 46296583 + 11.3 0.000 intron (NM_001314025, intron 4 of 4) intron (NM_001314025, intron 4 of 4) 10136 NM_058181 54059 Hs.474066 NM_058181 ENSG00000182362 YBEY C21orf57 ybeY metalloendoribonuclease protein-coding chr6-6055 chr6 132619787 132619997 + 11.3 0.000 intron (NM_001033080, intron 1 of 1) intron (NM_001033080, intron 1 of 1) -1799 NM_014626 9287 Hs.272382 NM_014626 ENSG00000146378 TAAR2 GPR58|taR-2 trace amine associated receptor 2 (gene/pseudogene) protein-coding chrX-688 chrX 41026053 41026263 + 11.3 0.000 Intergenic LTR56|LTR|ERV1 -59287 NM_001039590 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr4-1268 chr4 40321957 40322167 + 11.3 0.000 intron (NR_121640, intron 1 of 2) intron (NR_121640, intron 1 of 2) 5578 NR_121640 101060498 Hs.351492 NR_121640 ENSG00000249241 LINC02265 - long intergenic non-protein coding RNA 2265 ncRNA chr18-2226 chr18 67599322 67599532 + 11.3 0.000 intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) -82707 NM_032160 92126 Hs.124673 NM_032160 ENSG00000171451 DSEL C18orf4|DE-epi2 dermatan sulfate epimerase like protein-coding chr8-1719 chr8 133407043 133407253 + 11.3 0.000 Intergenic MIRb|SINE|MIR -109844 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr11-4581 chr11 129095408 129095618 + 11.3 0.000 intron (NM_001142685, intron 4 of 21) intron (NM_001142685, intron 4 of 21) -71325 NM_014715 9743 Hs.440379 NM_014715 ENSG00000134909 ARHGAP32 GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP Rho GTPase activating protein 32 protein-coding chr2-1528 chr2 119011533 119011743 + 11.3 0.000 Intergenic CpG 69469 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding chr12-1294 chr12 123057507 123057717 + 11.3 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) -23772 NR_038290 100507091 Hs.683912 NR_038290 ENSG00000251497 PITPNM2-AS1 - PITPNM2 antisense RNA 1 ncRNA chr16-2191 chr16 73285566 73285776 + 11.3 0.000 Intergenic Intergenic -101134 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr3-3570 chr3 52530546 52530756 + 11.3 0.000 intron (NM_022908, intron 1 of 13) FLAM_A|SINE|Alu 3206 NM_001134231 64943 Hs.84753 NM_022908 ENSG00000168268 NT5DC2 - 5'-nucleotidase domain containing 2 protein-coding chr2-5320 chr2 74930915 74931125 + 11.3 0.000 intron (NR_125792, intron 1 of 4) FordPrefect|DNA|hAT-Tip100 21889 NR_125792 102724515 Hs.708649 NR_125792 ENSG00000204792 LINC01291 - long intergenic non-protein coding RNA 1291 ncRNA chr3-3681 chr3 152438361 152438571 + 11.3 0.000 intron (NM_207296, intron 3 of 7) intron (NM_207296, intron 3 of 7) -97476 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr9-2879 chr9 130576292 130576502 + 11.3 0.000 TTS (NR_027440) TTS (NR_027440) 3097 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chrX-715 chrX 117015915 117016125 + 11.3 0.000 Intergenic THE1D|LTR|ERVL-MaLR -198160 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr1-1504 chr1 17011859 17012069 + 11.3 0.000 promoter-TSS (NM_001141973) promoter-TSS (NM_001141973) -36 NM_001141973 23400 Hs.128866 NM_022089 ENSG00000159363 ATP13A2 CLN12|HSA9947|KRPPD|PARK9|SPG78 ATPase cation transporting 13A2 protein-coding chr19-4370 chr19 2356575 2356785 + 11.3 0.000 Intergenic Intergenic 27996 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr8-1747 chr8 25319738 25319948 + 11.3 0.000 intron (NM_024940, intron 15 of 51) intron (NM_024940, intron 15 of 51) -25559 NR_106936 102465527 NR_106936 ENSG00000274988 MIR6876 hsa-mir-6876 microRNA 6876 ncRNA chr1-5008 chr1 66598899 66599109 + 11.3 0.000 intron (NM_001350218, intron 1 of 22) MER119|DNA|hAT-Charlie -29436 NR_036060 100422871 NR_036060 ENSG00000264720 MIR3117 mir-3117 microRNA 3117 ncRNA chr12-3570 chr12 26574308 26574518 + 11.3 0.000 intron (NM_002223, intron 34 of 56) L3|LINE|CR1 258781 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr12-4622 chr12 41485101 41485311 + 11.3 0.000 intron (NM_013377, intron 1 of 7) intron (NM_013377, intron 1 of 7) 47467 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr19-4106 chr19 16773240 16773450 + 11.3 0.000 intron (NM_001007525, intron 11 of 18) intron (NM_001007525, intron 11 of 18) 42153 NM_001347994 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr12-1269 chr12 65532777 65532987 + 11.3 0.000 intron (NR_120431, intron 2 of 3) intron (NR_120431, intron 2 of 3) 24429 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr7-2172 chr7 73718049 73718259 + 11.3 0.000 intron (NM_001165903, intron 1 of 9) intron (NM_001165903, intron 1 of 9) 1515 NM_004603 6804 Hs.647024 NM_004603 ENSG00000106089 STX1A HPC-1|P35-1|STX1|SYN1A syntaxin 1A protein-coding chr3-3116 chr3 148998378 148998588 + 11.3 0.000 intron (NM_004130, intron 4 of 7) MER20|DNA|hAT-Charlie 7075 NM_001184720 2992 Hs.477892 NM_004130 ENSG00000163754 GYG1 GSD15|GYG glycogenin 1 protein-coding chr8-2413 chr8 86258699 86258909 + 11.3 0.000 Intergenic Intergenic -28423 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr9-7887 chr9 87949222 87949432 + 11.3 0.000 Intergenic L1MEc|LINE|L1 -10067 NR_149022 497256 Hs.584108 NR_149022 LOC497256 - uncharacterized LOC497256 ncRNA chr10-5215 chr10 62338413 62338623 + 11.3 0.000 Intergenic LTR1F|LTR|ERV1 -35639 NM_199450 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr4-2026 chr4 3235005 3235215 + 11.3 0.000 intron (NM_002111, intron 61 of 66) intron (NM_002111, intron 61 of 66) -9259 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr20-3423 chr20 44620858 44621068 + 11.3 0.000 intron (NR_136160, intron 9 of 10) intron (NR_136160, intron 9 of 10) 30736 NM_000022 100 Hs.654536 NM_000022 ENSG00000196839 ADA - adenosine deaminase protein-coding chr1-3163 chr1 85240400 85240610 + 11.3 0.000 Intergenic Intergenic 19157 NM_198077 148423 Hs.26226 NM_198077 ENSG00000162642 C1orf52 gm117 chromosome 1 open reading frame 52 protein-coding chr2-6669 chr2 12970976 12971186 + 11.3 0.000 intron (NR_038434, intron 5 of 5) MLT1H|LTR|ERVL-MaLR 35932 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr10-2861 chr10 75195345 75195555 + 11.3 0.000 Intergenic Intergenic -14704 NM_001324088 7417 Hs.355927 NM_003375 ENSG00000165637 VDAC2 POR voltage dependent anion channel 2 protein-coding chr19-2652 chr19 7863964 7864174 + 11.3 0.000 3' UTR (NM_145245, exon 19 of 19) 3' UTR (NM_145245, exon 19 of 19) 10321 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr11-4030 chr11 9595346 9595556 + 11.3 0.000 Intergenic MIRb|SINE|MIR 20764 NM_001143976 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr5-2917 chr5 133831162 133831372 + 11.3 0.000 Intergenic Intergenic -82410 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr6-2256 chr6 55540268 55540478 + 11.3 0.000 intron (NM_001287746, intron 4 of 9) MLT1A0|LTR|ERVL-MaLR 38841 NR_109867 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr8-1625 chr8 61581269 61581479 + 11.3 0.000 intron (NM_004318, intron 15 of 24) L4_A_Mam|LINE|RTE-X 108437 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr3-9614 chr3 57563009 57563219 + 11.3 0.000 3' UTR (NM_001322177, exon 2 of 2) 3' UTR (NM_001322177, exon 2 of 2) 6840 NM_001322177 201626 Hs.572993 NM_177966 ENSG00000174840 PDE12 2'-PDE|2-PDE phosphodiesterase 12 protein-coding chr16-1840 chr16 65624986 65625196 + 11.3 0.000 Intergenic Intergenic -48791 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr1-1979 chr1 223712412 223712622 + 11.3 0.000 promoter-TSS (NM_001748) promoter-TSS (NM_001748) -22 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr10-1971 chr10 31584962 31585172 + 11.3 0.000 Intergenic Intergenic -185312 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr2-3807 chr2 23757791 23758001 + 11.3 0.000 exon (NM_001354107, exon 26 of 29) exon (NM_001354107, exon 26 of 29) 169227 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr12-4202 chr12 99062546 99062756 + 11.3 0.000 intron (NM_152788, intron 16 of 25) intron (NM_152788, intron 16 of 25) -30708 NR_110095 101928937 Hs.555499 NR_110095 ENSG00000258039 LOC101928937 - uncharacterized LOC101928937 ncRNA chrX-2606 chrX 107186066 107186276 + 11.3 0.000 intron (NR_033676, intron 1 of 6) L1MD1|LINE|L1 20262 NM_017681 54830 Hs.163629 NM_017681 ENSG00000198088 NUP62CL - nucleoporin 62 C-terminal like protein-coding chr1-7939 chr1 174040528 174040738 + 11.3 0.000 Intergenic MIR|SINE|MIR -47561 NM_172071 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding chr15-3094 chr15 63991665 63991875 + 11.3 0.000 intron (NM_014326, intron 2 of 11) L4_B_Mam|LINE|RTE-X 54715 NM_001363730 23604 Hs.237886 NM_014326 ENSG00000035664 DAPK2 DRP-1|DRP1 death associated protein kinase 2 protein-coding chr15-4768 chr15 70173830 70174040 + 11.3 0.000 Intergenic L1ME5|LINE|L1 -76018 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr16-3173 chr16 81945801 81946011 + 11.3 0.000 intron (NM_002661, intron 30 of 32) intron (NM_002661, intron 30 of 32) 65564 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr2-8506 chr2 128584539 128584749 + 11.3 0.000 Intergenic L1MEc|LINE|L1 -265776 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr11-6570 chr11 71937837 71938047 + 11.3 0.000 intron (NM_001300926, intron 1 of 6) intron (NM_001300926, intron 1 of 6) 8896 NM_018320 55298 Hs.368554 NM_018320 ENSG00000137522 RNF121 - ring finger protein 121 protein-coding chr6-3713 chr6 374847 375057 + 11.3 0.000 Intergenic L1MC4a|LINE|L1 -16800 NR_046000 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr2-9107 chr2 205774365 205774575 + 11.3 0.000 intron (NM_201266, intron 15 of 16) intron (NM_201266, intron 15 of 16) 91969 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr3-3259 chr3 56003196 56003406 + 11.3 0.000 intron (NR_132749, intron 10 of 17) intron (NR_132749, intron 10 of 17) -150707 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr4-3412 chr4 57321943 57322153 + 11.3 0.000 Intergenic L2c|LINE|L2 -103824 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr5-3438 chr5 156808637 156808847 + 11.3 0.000 Intergenic L1PA6|LINE|L1 -41553 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr18-1991 chr18 40276766 40276976 + 11.3 0.000 Intergenic L2|LINE|L2 210585 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr3-2998 chr3 100270134 100270344 + 11.3 0.000 intron (NM_001199198, intron 1 of 18) L2a|LINE|L2 9247 NM_001199198 55773 Hs.477003 NM_018309 ENSG00000036054 TBC1D23 NS4ATP1|PCH11 TBC1 domain family member 23 protein-coding chr6-3009 chr6 44730814 44731024 + 11.3 0.000 Intergenic Intergenic -179038 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr8-1582 chr8 133017139 133017349 + 11.3 0.000 intron (NM_003235, intron 37 of 47) MER46C|DNA|TcMar-Tigger 29337 NR_107002 102466865 NR_107002 ENSG00000276961 MIR7848 hsa-mir-7848 microRNA 7848 ncRNA chrX-2731 chrX 124843581 124843791 + 11.3 0.000 intron (NM_014253, intron 3 of 30) intron (NM_014253, intron 3 of 30) 120131 NM_001163279 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr16-2564 chr16 71796448 71796658 + 11.3 0.000 intron (NM_001128, intron 1 of 22) MamRep605|LTR?|LTR? 12281 NM_001128 164 Hs.461253 NM_001128 ENSG00000166747 AP1G1 ADTG|CLAPG1 adaptor related protein complex 1 subunit gamma 1 protein-coding chr16-4659 chr16 75599945 75600155 + 11.3 0.000 3' UTR (NM_001324453, exon 7 of 7) 3' UTR (NM_001324453, exon 7 of 7) 23231 NM_001324445 23536 Hs.729312 NM_012091 ENSG00000065457 ADAT1 HADAT1 adenosine deaminase tRNA specific 1 protein-coding chr4-4443 chr4 52982588 52982798 + 11.3 0.000 intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 120376 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr2-5696 chr2 206686944 206687154 + 11.3 0.000 intron (NM_001093730, intron 9 of 11) intron (NM_001093730, intron 9 of 11) 31347 NM_001093730 391475 Hs.640667 NM_001093730 ENSG00000232125 DYTN - dystrotelin protein-coding chr3-5472 chr3 186414920 186415130 + 11.3 0.000 Intergenic L2b|LINE|L2 -25320 NR_151709 107986164 Hs.131227 NR_151708 ENSG00000234548 LINC02020 - long intergenic non-protein coding RNA 2020 ncRNA chr16-764 chr16 70065847 70066057 + 11.3 0.000 promoter-TSS (NR_003610) promoter-TSS (NR_003610) -4 NR_003610 283970 Hs.513695 NM_199134 ENSG00000196696 PDXDC2P-NPIPB14P - nuclear pore complex-interacting protein pseudo chr18-2962 chr18 22282581 22282791 + 11.3 0.000 Intergenic Intergenic 113249 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr21-533 chr21 40209111 40209321 + 11.3 0.000 intron (NR_073202, intron 11 of 32) intron (NR_073202, intron 11 of 32) 3215 NR_039917 100616148 NR_039917 ENSG00000263973 MIR4760 - microRNA 4760 ncRNA chr2-7379 chr2 4970698 4970908 + 11.3 0.000 Intergenic L2|LINE|L2 -314581 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr7-2242 chr7 140222951 140223161 + 11.3 0.000 Intergenic Intergenic 45795 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr6-1718 chr6 34121217 34121427 + 11.3 0.000 intron (NM_001256809, intron 1 of 8) intron (NM_001256809, intron 1 of 8) -10559 NM_001256812 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr8-5597 chr8 93272128 93272338 + 11.3 0.000 Intergenic Intergenic -105383 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr2-9146 chr2 211157767 211157977 + 11.3 0.000 Intergenic Intergenic 540301 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chrX-1820 chrX 99016395 99016605 + 11.3 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 1393773 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr6-7038 chr6 25112821 25113031 + 11.3 0.000 intron (NR_027626, intron 4 of 6) MER58B|DNA|hAT-Charlie 24897 NR_002174 8418 Hs.484918 NR_002174 ENSG00000168405 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo chr13-1708 chr13 93079458 93079668 + 11.3 0.000 Intergenic Intergenic 34222 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA chr16-2867 chr16 88019343 88019553 + 11.3 0.000 intron (NM_001173539, intron 7 of 12) CpG 49430 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr1-7679 chr1 19435405 19435615 + 11.3 0.000 intron (NM_001206540, intron 1 of 9) intron (NM_001206540, intron 1 of 9) 48785 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr2-4110 chr2 150698268 150698478 + 11.3 0.000 Intergenic Intergenic 69476 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr11-6728 chr11 81580315 81580525 + 11.3 0.000 Intergenic Intergenic 310416 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr18-951 chr18 21442311 21442521 + 11.3 0.000 intron (NM_001142966, intron 10 of 32) intron (NM_001142966, intron 10 of 32) 158288 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding chr3-10950 chr3 176074385 176074595 + 11.3 0.000 Intergenic L1PB4|LINE|L1 -170061 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA chr11-4271 chr11 65981409 65981619 + 11.3 0.000 Intergenic Intergenic 19780 NM_005146 9092 Hs.502883 NM_005146 ENSG00000175467 SART1 Ara1|HAF|HOMS1|SART1259|SNRNP110|Snu66 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP protein-coding chr3-11114 chr3 186221743 186221953 + 11.3 0.000 intron (NM_001346, intron 20 of 24) intron (NM_001346, intron 20 of 24) -112759 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr1-11031 chr1 222697890 222698100 + 11.3 0.000 intron (NM_022831, intron 2 of 9) intron (NM_022831, intron 2 of 9) 14496 NM_022831 64853 Hs.156625 NM_022831 ENSG00000186063 AIDA C1orf80 axin interactor, dorsalization associated protein-coding chr12-2483 chr12 68899264 68899474 + 11.3 0.000 intron (NM_001874, intron 2 of 8) MamGypsy2-I|LTR|Gypsy 33802 NM_198320 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr5-1979 chr5 149030423 149030633 + 11.3 0.000 intron (NM_024577, intron 9 of 16) intron (NM_024577, intron 9 of 16) 31881 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr12-4851 chr12 58530693 58530903 + 11.3 0.000 Intergenic Intergenic -60904 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr3-6326 chr3 79257754 79257964 + 11.3 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) -153868 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr10-6072 chr10 130237181 130237391 + 11.3 0.000 Intergenic Intergenic 100877 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr15-3225 chr15 73744685 73744895 + 11.3 0.000 intron (NM_001039614, intron 1 of 1) MIR3|SINE|MIR 6685 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr1-3937 chr1 98277195 98277405 + 11.3 0.000 Intergenic Intergenic 66589 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr11-8973 chr11 21037098 21037308 + 11.3 0.000 intron (NM_201551, intron 12 of 18) MER3|DNA|hAT-Charlie 367617 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr1-6444 chr1 16872707 16872917 + 11.3 0.000 non-coding (NR_160657, exon 1 of 2) non-coding (NR_160657, exon 1 of 2) 586 NR_160658 112267871 NR_160657 LOC112267871 - uncharacterized LOC112267871 ncRNA chr7-5468 chr7 41189944 41190154 + 11.3 0.000 Intergenic MER45B|DNA|hAT-Tip100 88445 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr6-1687 chr6 12458565 12458775 + 11.3 0.000 Intergenic Intergenic 126734 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr16-4109 chr16 2757703 2757913 + 11.3 0.000 exon (NM_016333, exon 4 of 15) exon (NM_016333, exon 4 of 15) 5170 NM_016333 23524 Hs.433343 NM_016333 ENSG00000167978 SRRM2 300-KD|CWF21|Cwc21|HSPC075|SRL300|SRm300 serine/arginine repetitive matrix 2 protein-coding chr6-4751 chr6 70609390 70609600 + 11.3 0.000 Intergenic L1PBa|LINE|L1 42565 NM_145267 135154 Hs.418495 NM_145267 ENSG00000154079 SDHAF4 C6orf57|Sdh8 succinate dehydrogenase complex assembly factor 4 protein-coding chr7-6060 chr7 113100426 113100636 + 11.3 0.000 Intergenic (ACAC)n|Simple_repeat|Simple_repeat -12753 NM_018970 54329 Hs.152009 NM_018970 ENSG00000164604 GPR85 SREB|SREB2 G protein-coupled receptor 85 protein-coding chr10-8755 chr10 103960096 103960306 + 11.3 0.000 Intergenic Intergenic -6939 NM_001304743 9748 Hs.591922 NM_014720 ENSG00000065613 SLK LOSK|STK2|bA16H23.1|se20-9 STE20 like kinase protein-coding chr3-3886 chr3 41808231 41808441 + 11.3 0.000 intron (NR_136342, intron 18 of 34) intron (NR_136342, intron 18 of 34) 153767 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr8-2303 chr8 133356832 133357042 + 11.3 0.000 Intergenic Intergenic -59633 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr10-4728 chr10 811976 812186 + 11.3 0.000 3' UTR (NM_015155, exon 18 of 18) 3' UTR (NM_015155, exon 18 of 18) 119624 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr2-8682 chr2 150569898 150570108 + 11.3 0.000 non-coding (NR_110241, exon 4 of 6) non-coding (NR_110241, exon 4 of 6) 2218 NR_110241 101929260 Hs.732324 NR_110241 ENSG00000236049 LINC01920 - long intergenic non-protein coding RNA 1920 ncRNA chr17-3212 chr17 3810401 3810611 + 11.3 0.000 3' UTR (NM_001114118, exon 13 of 13) 3' UTR (NM_001114118, exon 13 of 13) -9318 NM_002208 3682 Hs.513867 NM_002208 ENSG00000083457 ITGAE CD103|HUMINAE integrin subunit alpha E protein-coding chr2-2435 chr2 45554290 45554500 + 11.3 0.000 intron (NM_018079, intron 10 of 20) MLT1A|LTR|ERVL-MaLR 56872 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chrX-4768 chrX 95937597 95937807 + 11.3 0.000 Intergenic L1PB1|LINE|L1 400200 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr5-3423 chr5 150541883 150542093 + 11.3 0.000 intron (NM_001301063, intron 9 of 13) intron (NM_001301063, intron 9 of 13) 33857 NM_001543 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr1-3545 chr1 226021924 226022134 + 11.3 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -22686 NM_152608 163859 Hs.520192 NM_152608 ENSG00000143751 SDE2 C1orf55|dJ671D7.1 SDE2 telomere maintenance homolog protein-coding chr12-1822 chr12 10613714 10613924 + 11.3 0.000 promoter-TSS (NM_001319985) promoter-TSS (NM_001319985) -210 NM_018048 55110 Hs.104650 NM_018048 ENSG00000111196 MAGOHB MGN2|mago|magoh mago homolog B, exon junction complex subunit protein-coding chr7-2037 chr7 94972311 94972521 + 11.3 0.000 intron (NM_017650, intron 2 of 15) intron (NM_017650, intron 2 of 15) 62518 NM_001166162 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr10-2123 chr10 133141971 133142181 + 11.3 0.000 Intergenic CpG -18143 NM_001347865 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr17-3789 chr17 39271086 39271296 + 11.3 0.000 intron (NM_001370209, intron 9 of 13) intron (NM_001370209, intron 9 of 13) -26209 NR_162098 113839521 NR_162098 MIR548BC - microRNA 548BC ncRNA chr17-1948 chr17 81608026 81608236 + 11.3 0.000 intron (NM_001369698, intron 6 of 16) intron (NM_001369698, intron 6 of 16) 28981 NM_017921 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr8-936 chr8 42319681 42319891 + 11.3 0.000 intron (NM_001242778, intron 14 of 20) intron (NM_001242778, intron 14 of 20) -18708 NM_002690 5423 Hs.654484 NM_002690 ENSG00000070501 POLB - DNA polymerase beta protein-coding chr3-5001 chr3 23219216 23219426 + 11.3 0.000 intron (NM_001370225, intron 3 of 5) intron (NM_001370225, intron 3 of 5) 15994 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr11-1997 chr11 45805567 45805777 + 11.3 0.000 5' UTR (NM_018389, exon 1 of 2) 5' UTR (NM_018389, exon 1 of 2) 582 NM_018389 55343 Hs.12211 NM_018389 ENSG00000181830 SLC35C1 CDG2C|FUCT1 solute carrier family 35 member C1 protein-coding chr22-2744 chr22 39683089 39683299 + 11.3 0.000 intron (NM_001003406, intron 34 of 35) G-rich|Low_complexity|Low_complexity 112441 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr2-3573 chr2 42929066 42929276 + 11.3 0.000 Intergenic Intergenic 110372 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr10-4209 chr10 113142758 113142968 + 11.3 0.000 intron (NM_001198528, intron 5 of 14) intron (NM_001198528, intron 5 of 14) 13592 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr4-3880 chr4 140565922 140566132 + 11.3 0.000 intron (NM_021833, intron 2 of 5) Tigger3a|DNA|TcMar-Tigger 2934 NM_021833 7350 Hs.249211 NM_021833 ENSG00000109424 UCP1 SLC25A7|UCP uncoupling protein 1 protein-coding chr14-5034 chr14 79445882 79446092 + 11.3 0.000 intron (NM_001105250, intron 1 of 6) L2a|LINE|L2 166607 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr11-6084 chr11 33786544 33786754 + 11.3 0.000 Intergenic L1PB4|LINE|L1 11950 NR_120550 101928440 Hs.202343 NR_120550 ENSG00000254508 FBXO3-DT FBXO3-AS1 FBXO3 divergent transcript ncRNA chr5-1545 chr5 37198932 37199142 + 11.3 0.000 intron (NM_023073, intron 19 of 51) AluJo|SINE|Alu -50009 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chrX-1350 chrX 139391646 139391856 + 11.3 0.000 Intergenic Intergenic -55068 NR_028597 6719 Hs.730315 NR_028597 SRD5A1P1 SRD5AP1 steroid 5 alpha-reductase 1 pseudogene 1 pseudo chr6-3294 chr6 158174543 158174753 + 11.3 0.000 intron (NM_207118, intron 2 of 2) intron (NM_207118, intron 2 of 2) 6301 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr12-5064 chr12 90909039 90909249 + 11.3 0.000 Intergenic Intergenic -8879 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr11-5051 chr11 102266047 102266257 + 11.3 0.000 Intergenic Intergenic -51332 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr7-1873 chr7 47100902 47101112 + 11.3 0.000 Intergenic Intergenic 363796 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr9-4873 chr9 3455879 3456089 + 11.3 0.000 intron (NM_001282116, intron 1 of 16) MLT1A1|LTR|ERVL-MaLR 33503 NM_001282117 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr13-4017 chr13 71819327 71819537 + 11.3 0.000 intron (NM_080759, intron 1 of 10) intron (NM_080759, intron 1 of 10) 47760 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr6-3394 chr6 60726782 60726992 + 11.3 0.000 Intergenic LTR17|LTR|ERV1 -847243 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr7-2925 chr7 134916323 134916533 + 11.3 0.000 intron (NM_033139, intron 1 of 12) intron (NM_033139, intron 1 of 12) 24970 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr17-1707 chr17 47719550 47719760 + 11.3 0.000 Intergenic Intergenic -13581 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr2-6803 chr2 53636299 53636509 + 11.3 0.000 Intergenic Intergenic -131379 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr6-3111 chr6 98572252 98572462 + 11.3 0.000 Intergenic Intergenic 259343 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr2-8279 chr2 101883869 101884079 + 11.3 0.000 intron (NM_145686, intron 26 of 30) intron (NM_145686, intron 26 of 30) -99491 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr1-4654 chr1 200839041 200839251 + 11.3 0.000 intron (NM_001297707, intron 7 of 17) L2|LINE|L2 -33835 NM_005298 2848 Hs.534316 NM_005298 ENSG00000170128 GPR25 - G protein-coupled receptor 25 protein-coding chr2-3591 chr2 69164406 69164616 + 11.3 0.000 intron (NM_032208, intron 13 of 17) intron (NM_032208, intron 13 of 17) 60829 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr12-4908 chr12 67118323 67118533 + 11.3 0.000 Intergenic L1MC4|LINE|L1 -22144 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr15-1838 chr15 47828114 47828324 + 11.3 0.000 intron (NR_120336, intron 2 of 4) intron (NR_120336, intron 2 of 4) 18017 NR_120336 101928442 Hs.242804 NR_120336 ENSG00000259572 LINC01491 - long intergenic non-protein coding RNA 1491 ncRNA chr11-7791 chr11 96000537 96000747 + 11.3 0.000 intron (NM_032427, intron 2 of 4) intron (NM_032427, intron 2 of 4) -76435 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr16-4609 chr16 69298026 69298236 + 11.3 0.000 intron (NM_006750, intron 5 of 6) AluJr|SINE|Alu -13219 NM_013245 27183 Hs.128420 NM_013245 ENSG00000132612 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A protein-coding chr18-2086 chr18 49277464 49277674 + 11.3 0.000 intron (NM_001353210, intron 10 of 16) MLT1A0|LTR|ERVL-MaLR 183076 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr1-7154 chr1 205541297 205541507 + 11.3 0.000 Intergenic Intergenic -27612 NM_181644 148808 Hs.567714 NM_181644 ENSG00000174514 MFSD4A MFSD4|UNQ3064 major facilitator superfamily domain containing 4A protein-coding chr2-6692 chr2 21271967 21272177 + 11.3 0.000 Intergenic Intergenic 148086 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr3-6488 chr3 111782214 111782424 + 11.3 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) 49823 NM_001134437 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr1-9320 chr1 27416702 27416912 + 11.3 0.000 intron (NM_006990, intron 4 of 8) intron (NM_006990, intron 4 of 8) 24185 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chr2-2791 chr2 20071526 20071736 + 11.3 0.000 Intergenic Intergenic -20003 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr21-1428 chr21 20838595 20838805 + 11.3 0.000 Intergenic L1MA5A|LINE|L1 -35592 NR_024090 387486 Hs.576551 NR_024090 ENSG00000224924 LINC00320 C21orf131|NCRNA00320|PRED14 long intergenic non-protein coding RNA 320 ncRNA chr8-5191 chr8 104456370 104456580 + 11.3 0.000 intron (NM_001385, intron 1 of 9) intron (NM_001385, intron 1 of 9) 10580 NM_001385 1807 Hs.443161 NM_001385 ENSG00000147647 DPYS DHP|DHPase dihydropyrimidinase protein-coding chr13-1698 chr13 86185999 86186209 + 11.3 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -386685 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr4-2519 chr4 39062468 39062678 + 11.3 0.000 exon (NM_015990, exon 1 of 11) exon (NM_015990, exon 1 of 11) 341 NM_199039 51088 Hs.272251 NM_015990 ENSG00000109790 KLHL5 - kelch like family member 5 protein-coding chr8-4406 chr8 106525288 106525498 + 11.3 0.000 intron (NM_018002, intron 3 of 15) MIRb|SINE|MIR 77469 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr4-3813 chr4 115027242 115027452 + 11.3 0.000 intron (NM_022569, intron 2 of 13) LTR78|LTR|ERV1 86273 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr10-4143 chr10 80358700 80358910 + 11.3 0.000 intron (NM_032372, intron 2 of 4) LTR12C|LTR|ERV1 2024 NM_032372 84332 Hs.741500 NM_032372 ENSG00000133665 DYDC2 - DPY30 domain containing 2 protein-coding chr9-3661 chr9 96139786 96139996 + 11.3 0.000 Intergenic Intergenic -23480 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr9-2314 chr9 2489895 2490105 + 11.3 0.000 Intergenic Tigger11a|DNA|TcMar-Tigger -131787 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chrX-1825 chrX 101734206 101734416 + 11.3 0.000 Intergenic Intergenic -74461 NM_177949 9823 Hs.48924 NM_014782 ENSG00000184867 ARMCX2 ALEX2|GASP9 armadillo repeat containing X-linked 2 protein-coding chr11-6980 chr11 116199189 116199399 + 11.3 0.000 Intergenic Intergenic -439094 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr4-2986 chr4 118911559 118911769 + 11.3 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) 22810 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr12-5225 chr12 107411823 107412033 + 11.3 0.000 intron (NM_001347944, intron 1 of 14) intron (NM_001347944, intron 1 of 14) 91340 NM_001347944 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr21-1948 chr21 45884503 45884713 + 11.3 0.000 intron (NM_001348242, intron 5 of 17) AluJb|SINE|Alu 34647 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr15-3115 chr15 65184437 65184647 + 11.3 0.000 intron (NM_006660, intron 1 of 13) CpG 800 NR_133680 10845 Hs.113823 NM_006660 ENSG00000166855 CLPX EPP2 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding chr15-1779 chr15 75599149 75599359 + 11.3 0.000 intron (NM_001042581, intron 8 of 8) MIRc|SINE|MIR -19939 NM_002833 5780 Hs.445775 NM_002833 ENSG00000169410 PTPN9 MEG2|PTPMEG2 protein tyrosine phosphatase non-receptor type 9 protein-coding chr3-1681 chr3 11718851 11719061 + 11.3 0.000 intron (NM_014667, intron 1 of 5) intron (NM_014667, intron 1 of 5) 1583 NM_001284390 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr10-4931 chr10 24448649 24448859 + 11.3 0.000 promoter-TSS (NM_001282769) promoter-TSS (NM_001282769) -660 NM_001282769 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr11-6999 chr11 117193336 117193546 + 11.3 0.000 intron (NM_001040455, intron 23 of 25) intron (NM_001040455, intron 23 of 25) -5853 NM_001001522 6876 Hs.410977 NM_003186 ENSG00000149591 TAGLN SM22|SM22-alpha|SMCC|TAGLN1|WS3-10 transgelin protein-coding chr3-4308 chr3 163459877 163460087 + 11.3 0.000 Intergenic L1M5|LINE|L1 -156681 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr4-2591 chr4 114594116 114594326 + 11.3 0.000 Intergenic HERV1_I-int|LTR|ERV1 -4181 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr3-2102 chr3 42704449 42704659 + 11.3 0.000 intron (NR_146957, intron 2 of 2) intron (NR_146957, intron 2 of 2) -1756 NM_020707 57467 Hs.476041 NM_020707 ENSG00000010282 HHATL C3orf3|GUP1|MBOAT3|MSTP002|OACT3 hedgehog acyltransferase like protein-coding chr1-6401 chr1 10841225 10841435 + 11.3 0.000 Intergenic Intergenic -44684 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chrX-1720 chrX 24309821 24310031 + 11.3 0.000 3' UTR (NM_001136233, exon 1 of 1) 3' UTR (NM_001136233, exon 1 of 1) 3467 NM_001136233 170067 Hs.716893 NM_001136233 SUPT20HL2 FAM48B1|FAM48B2 SUPT20H like 2 protein-coding chr11-3473 chr11 76745466 76745676 + 11.3 0.000 Intergenic Intergenic -23782 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr12-3737 chr12 27615520 27615730 + 11.3 0.000 intron (NM_001198915, intron 2 of 26) intron (NM_001198915, intron 2 of 26) -80822 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr19-3029 chr19 55189365 55189575 + 11.3 0.000 intron (NM_002842, intron 12 of 19) L2a|LINE|L2 -9181 NM_003180 6861 Hs.631566 NM_003180 ENSG00000129990 SYT5 - synaptotagmin 5 protein-coding chr4-6996 chr4 23127351 23127561 + 11.3 0.000 Intergenic L1MC3|LINE|L1 413367 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr1-4274 chr1 9006820 9007030 + 11.3 0.000 intron (NM_207420, intron 10 of 11) intron (NM_207420, intron 10 of 11) 19420 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr17-3877 chr17 49571867 49572077 + 11.3 0.000 intron (NR_103773, intron 1 of 2) L2c|LINE|L2 2092 NR_103773 100288866 Hs.720309 NR_103773 ENSG00000249906 LOC100288866 - uncharacterized LOC100288866 ncRNA chr10-3055 chr10 132469219 132469429 + 11.3 0.000 Intergenic Intergenic 24135 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr10-3256 chr10 124766024 124766234 + 11.3 0.000 intron (NM_001304468, intron 4 of 5) intron (NM_001304468, intron 4 of 5) -21751 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr9-5437 chr9 97231013 97231223 + 11.3 0.000 intron (NR_136286, intron 1 of 17) AluJo|SINE|Alu -7308 NR_036526 100499484 Hs.435629 NR_036526 ENSG00000254876 SUGT1P4-STRA6LP - SUGT1P4-STRA6LP readthrough pseudo chr10-3178 chr10 86815226 86815436 + 11.3 0.000 intron (NM_004329, intron 1 of 12) L1MC5|LINE|L1 58692 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr8-2529 chr8 24150272 24150482 + 11.3 0.000 Intergenic L1M4|LINE|L1 -143663 NM_021777 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr5-7081 chr5 176270583 176270793 + 11.3 0.000 intron (NM_001308196, intron 3 of 11) L1M1|LINE|L1 32264 NR_131772 375484 Hs.719847 NM_198567 ENSG00000170085 SIMC1 C5orf25|OOMA1|PLEIAD SUMO interacting motifs containing 1 protein-coding chr20-2471 chr20 32086726 32086936 + 11.3 0.000 intron (NM_001172131, intron 9 of 12) G-rich|Low_complexity|Low_complexity -22883 NM_014742 9777 Hs.654665 NM_014742 ENSG00000101337 TM9SF4 dJ836N17.2 transmembrane 9 superfamily member 4 protein-coding chr8-4112 chr8 71047084 71047294 + 11.3 0.000 Intergenic Intergenic 309517 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr17-3043 chr17 79731119 79731329 + 11.3 0.000 exon (NM_178543, exon 1 of 6) exon (NM_178543, exon 1 of 6) 281 NM_178543 339221 Hs.114084 NM_178543 ENSG00000182156 ENPP7 ALK-SMase|E-NPP 7|NPP-7|NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 protein-coding chr22-2659 chr22 36149453 36149663 + 11.3 0.000 intron (NM_030644, intron 1 of 4) MIRb|SINE|MIR 11197 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr1-5948 chr1 26891335 26891545 + 11.3 0.000 intron (NM_022078, intron 6 of 6) intron (NM_022078, intron 6 of 6) -1157 NM_018066 54707 Hs.14333 NM_018066 ENSG00000142751 GPN2 ATPBD1B GPN-loop GTPase 2 protein-coding chr8-2858 chr8 134269224 134269434 + 11.3 0.000 Intergenic Intergenic -328742 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr2-5346 chr2 88656983 88657193 + 11.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 29259 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 EIF2AK3-DT - EIF2AK3 divergent transcript ncRNA chr7-3739 chr7 71277889 71278099 + 11.3 0.000 intron (NM_022479, intron 1 of 10) intron (NM_022479, intron 1 of 10) -29680 NR_037479 100500920 NR_037479 ENSG00000283278 MIR3914-2 - microRNA 3914-2 ncRNA chr8-4553 chr8 125371056 125371266 + 11.3 0.000 Intergenic AluSx3|SINE|Alu -59197 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr8-4246 chr8 90541502 90541712 + 11.3 0.000 Intergenic Intergenic 64456 NR_104062 101937451 Hs.583685 NR_104062 ENSG00000253799 LINC01030 - long intergenic non-protein coding RNA 1030 ncRNA chr10-2214 chr10 59612484 59612694 + 11.3 0.000 Intergenic Intergenic 97302 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr4-5065 chr4 144045055 144045265 + 11.3 0.000 Intergenic Intergenic -25815 NM_002100 2994 Hs.654368 NM_002100 ENSG00000250361 GYPB CD235b|GPB|GYP|GYPA|MNS|PAS-3|SS glycophorin B (MNS blood group) protein-coding chr16-3506 chr16 14125320 14125530 + 11.3 0.000 intron (NM_001365418, intron 3 of 5) intron (NM_001365418, intron 3 of 5) 54106 NM_001365419 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr2-3843 chr2 30777424 30777634 + 11.3 0.000 intron (NM_144575, intron 3 of 22) intron (NM_144575, intron 3 of 22) 29917 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr8-4128 chr8 73799897 73800107 + 11.3 0.000 intron (NR_073120, intron 4 of 5) intron (NR_073120, intron 4 of 5) -52294 NM_001164384 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr18-262 chr18 812581 812791 + 11.3 0.000 promoter-TSS (NM_005433) promoter-TSS (NM_005433) -444 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr15-978 chr15 58551658 58551868 + 11.3 0.000 intron (NM_000236, intron 6 of 8) intron (NM_000236, intron 6 of 8) -53028 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr8-1741 chr8 19928898 19929108 + 11.3 0.000 Intergenic Intergenic -10250 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr5-3703 chr5 10913803 10914013 + 11.3 0.000 Intergenic Intergenic -152674 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr11-6139 chr11 41060593 41060803 + 11.3 0.000 intron (NM_001258419, intron 1 of 6) MLT1B|LTR|ERVL-MaLR 398938 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr6-2346 chr6 127542488 127542698 + 11.3 0.000 Intergenic Intergenic -23569 NM_001012279 387104 Hs.319247 NM_001012279 ENSG00000255330 SOGA3 C6orf174|dJ403A15.3 SOGA family member 3 protein-coding chr1-14149 chr1 32251040 32251250 + 11.3 0.000 promoter-TSS (NM_001330468) promoter-TSS (NM_001330468) -120 NM_005356 3932 Hs.470627 NM_005356 ENSG00000182866 LCK IMD22|LSK|YT16|p56lck|pp58lck LCK proto-oncogene, Src family tyrosine kinase protein-coding chr7-2750 chr7 45577329 45577539 + 11.3 0.000 intron (NM_001281768, intron 2 of 9) intron (NM_001281768, intron 2 of 9) 3066 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr2-5538 chr2 159906274 159906484 + 11.3 0.000 Intergenic Intergenic -1623 NM_001198759 100526664 Hs.153563 NM_001198759 ENSG00000248672 LY75-CD302 CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6 LY75-CD302 readthrough protein-coding chr15-2186 chr15 87348817 87349027 + 11.3 0.000 Intergenic MIRb|SINE|MIR -228007 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr2-9557 chr2 240134006 240134216 + 11.3 0.000 intron (NM_001163424, intron 1 of 2) intron (NM_001163424, intron 1 of 2) 2194 NM_001163424 150678 Hs.293884 NM_138336 ENSG00000172428 COPS9 CSNAP|MYEOV2 COP9 signalosome subunit 9 protein-coding chr3-6640 chr3 127645771 127645981 + 11.3 0.000 intron (NM_015720, intron 2 of 7) intron (NM_015720, intron 2 of 7) 16691 NM_015720 50512 Hs.591290 NM_015720 ENSG00000114631 PODXL2 EG|PODLX2 podocalyxin like 2 protein-coding chr22-1365 chr22 29448074 29448284 + 11.3 0.000 Intergenic Intergenic -6050 NR_002727 10740 Hs.167750 NR_002727 RFPL1S NCRNA00006|RFPL1-AS|RFPL1-AS1|RFPL1AS RFPL1 antisense RNA 1 ncRNA chr2-7728 chr2 36395817 36396027 + 11.3 0.000 intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 40144 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr5-2703 chr5 88785999 88786209 + 11.3 0.000 promoter-TSS (NM_001364353) promoter-TSS (NM_001364353) -593 NM_001364353 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr10-5432 chr10 77731983 77732193 + 11.3 0.000 Intergenic Intergenic -94280 NM_001271522 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10-5539 chr10 86058969 86059179 + 11.3 0.000 intron (NM_017551, intron 4 of 15) L2b|LINE|L2 205714 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr7-9214 chr7 117322773 117322983 + 11.3 0.000 intron (NM_003391, intron 1 of 4) CpG 180 NR_024047 7472 Hs.567356 NM_003391 ENSG00000105989 WNT2 INT1L1|IRP Wnt family member 2 protein-coding chr10-4877 chr10 17228680 17228890 + 11.3 0.000 intron (NM_003380, intron 1 of 9) CpG 544 NM_003380 7431 Hs.455493 NM_003380 ENSG00000026025 VIM - vimentin protein-coding chr1-3651 chr1 81231570 81231780 + 11.3 0.000 Intergenic Intergenic -74517 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr1-5222 chr1 192496681 192496891 + 11.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -78987 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G protein signaling 1 protein-coding chr19-4334 chr19 1716166 1716376 + 11.3 0.000 Intergenic Intergenic -37235 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr1-9875 chr1 66941171 66941381 + 11.3 0.000 intron (NM_001350530, intron 5 of 15) intron (NM_001350530, intron 5 of 15) 11020 NM_001077701 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chrX-2573 chrX 103276425 103276635 + 11.3 0.000 intron (NM_001012979, intron 1 of 2) intron (NM_001012979, intron 1 of 2) 220 NM_001012979 340543 Hs.403462 NM_001012979 ENSG00000204065 TCEAL5 WEX4 transcription elongation factor A like 5 protein-coding chr1-4276 chr1 9933583 9933793 + 11.3 0.000 intron (NM_001316974, intron 5 of 7) AluJb|SINE|Alu -9235 NM_001297778 64802 Hs.633762 NM_022787 ENSG00000173614 NMNAT1 LCA9|NMNAT|PNAT1 nicotinamide nucleotide adenylyltransferase 1 protein-coding chr14-4567 chr14 47141950 47142160 + 11.3 0.000 intron (NM_001113498, intron 4 of 16) intron (NM_001113498, intron 4 of 16) 201191 NR_103766 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr3-2411 chr3 194132684 194132894 + 11.3 0.000 Intergenic Intergenic -3359 NM_005524 3280 Hs.250666 NM_005524 ENSG00000114315 HES1 HES-1|HHL|HRY|bHLHb39 hes family bHLH transcription factor 1 protein-coding chr19-2879 chr19 29006521 29006731 + 11.3 0.000 intron (NR_040036, intron 3 of 4) intron (NR_040036, intron 3 of 4) 4071 NR_040036 100505835 Hs.176539 NR_040036 ENSG00000267014 LINC01532 - long intergenic non-protein coding RNA 1532 ncRNA chr7-5929 chr7 99386934 99387144 + 11.3 0.000 intron (NM_005720, intron 3 of 9) MLT1K|LTR|ERVL-MaLR 12309 NM_005720 10095 Hs.489284 NM_005720 ENSG00000130429 ARPC1B ARC41|PLTEID|p40-ARC|p41-ARC actin related protein 2/3 complex subunit 1B protein-coding chr1-10985 chr1 216566780 216566990 + 11.3 0.000 intron (NM_001243518, intron 5 of 7) intron (NM_001243518, intron 5 of 7) -143437 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr3-6748 chr3 140292871 140293081 + 11.3 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 215813 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr12-8004 chr12 112164153 112164363 + 11.3 0.000 promoter-TSS (NR_106921) promoter-TSS (NR_106921) -937 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr14-1410 chr14 63953197 63953407 + 11.3 0.000 intron (NM_015180, intron 7 of 114) L2b|LINE|L2 100298 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr3-2768 chr3 157261304 157261514 + 11.3 0.000 intron (NM_024621, intron 13 of 13) intron (NM_024621, intron 13 of 13) -100649 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr10-3488 chr10 67920978 67921188 + 11.3 0.000 TTS (NM_015601) TTS (NM_015601) 29681 NM_001314049 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr19-4654 chr19 16407860 16408070 + 11.3 0.000 intron (NM_021235, intron 13 of 22) intron (NM_021235, intron 13 of 22) 64005 NM_001258374 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr22-2517 chr22 23681257 23681467 + 11.3 0.000 intron (NR_024448, intron 10 of 11) L1M2b|LINE|L1 -9499 NM_001329424 266747 Hs.658997 NM_153615 ENSG00000159496 RGL4 Rgr ral guanine nucleotide dissociation stimulator like 4 protein-coding chr2-2479 chr2 128232818 128233028 + 11.3 0.000 Intergenic Intergenic 85945 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr10-1227 chr10 63414949 63415159 + 11.3 0.000 intron (NM_001322258, intron 1 of 24) MamRep137|DNA|TcMar-Tigger -15521 NR_134312 105378330 Hs.602852 NR_134312 LOC105378330 - uncharacterized LOC105378330 ncRNA chr3-4270 chr3 151789995 151790205 + 11.3 0.000 intron (NR_110203, intron 1 of 2) L1MC4|LINE|L1 19644 NR_026915 201651 Hs.383050 NR_026915 ENSG00000240602 AADACP1 - arylacetamide deacetylase pseudogene 1 pseudo chr3-6822 chr3 146947682 146947892 + 11.3 0.000 Intergenic Intergenic 25864 NR_135560 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr13-1331 chr13 30864834 30865044 + 11.3 0.000 Intergenic Intergenic -17623 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr3-4496 chr3 57999047 57999257 + 11.3 0.000 Intergenic Intergenic -9270 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr7-2580 chr7 128951672 128951882 + 11.3 0.000 Intergenic Intergenic 10509 NM_001364314 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr1-2736 chr1 21490870 21491080 + 11.3 0.000 Intergenic LTR28C|LTR|ERV1 -18009 NM_001369805 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr11-2587 chr11 123251558 123251768 + 11.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -56415 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr10-1108 chr10 95809423 95809633 + 11.3 0.000 intron (NR_038444, intron 4 of 5) SVA_B|Retroposon|SVA 53365 NM_001776 953 Hs.576612 NM_001776 ENSG00000138185 ENTPD1 ATPDase|CD39|NTPDase-1|SPG64 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding chr3-3311 chr3 171944679 171944889 + 11.3 0.000 Intergenic Intergenic -44044 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA chr3-10287 chr3 125125761 125125971 + 11.3 0.000 intron (NM_001195483, intron 5 of 12) intron (NM_001195483, intron 5 of 12) 25686 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr5-5206 chr5 114034951 114035161 + 11.3 0.000 Intergenic L1PA17|LINE|L1 -327014 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr15-1404 chr15 42796941 42797151 + 11.3 0.000 intron (NM_173500, intron 9 of 14) intron (NM_173500, intron 9 of 14) -59918 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chrX-1953 chrX 7334650 7334860 + 11.3 0.000 intron (NM_001320753, intron 9 of 9) intron (NM_001320753, intron 9 of 9) 82282 NM_001320754 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr21-267 chr21 46099656 46099866 + 11.3 0.000 intron (NM_058174, intron 1 of 27) intron (NM_058174, intron 1 of 27) 1642 NM_058175 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr9-6623 chr9 130391746 130391956 + 11.3 0.000 intron (NM_001291815, intron 65 of 97) intron (NM_001291815, intron 65 of 97) -52856 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr1-6948 chr1 156203470 156203680 + 11.3 0.000 intron (NM_014655, intron 2 of 3) MIR|SINE|MIR -9413 NM_001199664 100527963 Hs.530479 NM_001199661 ENSG00000260238 PMF1-BGLAP PMF-1|PMF1 PMF1-BGLAP readthrough protein-coding chr3-5125 chr3 52043987 52044197 + 11.3 0.000 Intergenic Intergenic 12479 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr16-1031 chr16 4570270 4570480 + 11.3 0.000 intron (NM_001145011, intron 1 of 15) L1M4|LINE|L1 13885 NM_001145011 342346 Hs.684212 NM_001145011 ENSG00000205832 C16orf96 - chromosome 16 open reading frame 96 protein-coding chr1-10212 chr1 114201498 114201708 + 11.3 0.000 Intergenic Intergenic -47734 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr5-7427 chr5 28964970 28965180 + 11.3 0.000 Intergenic Intergenic 38205 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo chr6-3195 chr6 130742322 130742532 + 11.3 0.000 Intergenic Intergenic -84978 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr18-691 chr18 8998904 8999114 + 11.3 0.000 Intergenic Intergenic -103690 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr5-2505 chr5 154287195 154287405 + 11.3 0.000 intron (NM_198321, intron 1 of 11) L2c|LINE|L2 -59806 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr1-6040 chr1 80066129 80066339 + 11.3 0.000 Intergenic MIRc|SINE|MIR -469521 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr1-6603 chr1 39158377 39158587 + 11.3 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 74315 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr1-4244 chr1 203861279 203861489 + 11.3 0.000 promoter-TSS (NM_003094) promoter-TSS (NM_003094) -215 NR_130746 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding chr1-4343 chr1 66810017 66810227 + 11.3 0.000 Intergenic Intergenic -8863 NM_005478 10022 Hs.251380 NM_005478 ENSG00000172410 INSL5 PRO182|UNQ156 insulin like 5 protein-coding chr15-2932 chr15 46587937 46588147 + 11.3 0.000 Intergenic L1M2|LINE|L1 -596047 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr16-4764 chr16 85190677 85190887 + 11.3 0.000 Intergenic Intergenic -17014 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr18-3074 chr18 32527247 32527457 + 11.3 0.000 Intergenic L2c|LINE|L2 15689 NR_003558 441818 Hs.549773 NR_003558 ENSG00000260389 WBP11P1 HsT3017 WW domain binding protein 11 pseudogene 1 pseudo chr10-5706 chr10 100632111 100632321 + 11.3 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 96273 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr19-1310 chr19 19510396 19510606 + 11.3 0.000 Intergenic AluJb|SINE|Alu 5047 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chrX-1100 chrX 10848129 10848339 + 11.3 0.000 Intergenic Intergenic -14551 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr15-2497 chr15 25951495 25951705 + 11.3 0.000 intron (NR_040082, intron 1 of 4) L1MB2|LINE|L1 49240 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr1-3881 chr1 52857386 52857596 + 11.3 0.000 exon (NM_001004339, exon 3 of 14) exon (NM_001004339, exon 3 of 14) 14731 NM_001004339 440590 Hs.658458 NM_001004339 ENSG00000203995 ZYG11A ZYG11 zyg-11 family member A, cell cycle regulator protein-coding chr4-2838 chr4 47424587 47424797 + 11.3 0.000 intron (NM_000812, intron 8 of 8) intron (NM_000812, intron 8 of 8) 39010 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chr17-5689 chr17 51015170 51015380 + 11.3 0.000 intron (NM_001130527, intron 7 of 29) HAL1|LINE|L1 31603 NM_001251971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr19-4110 chr19 17236446 17236656 + 11.3 0.000 intron (NM_005234, intron 2 of 3) intron (NM_005234, intron 2 of 3) 8791 NM_005234 2063 Hs.466148 NM_005234 ENSG00000160113 NR2F6 EAR-2|EAR2|ERBAL2 nuclear receptor subfamily 2 group F member 6 protein-coding chr21-248 chr21 36210074 36210284 + 11.3 0.000 intron (NM_005128, intron 5 of 36) intron (NM_005128, intron 5 of 36) 45638 NM_005128 9980 Hs.204575 NM_005128 ENSG00000142197 DOP1B 21orf5|C21orf5|DOPEY2 DOP1 leucine zipper like protein B protein-coding KI270589.1-2 KI270589.1 41976 42186 + 11.3 0.000 NA NA NA NA chr9-6839 chr9 69328760 69328970 + 11.3 0.000 promoter-TSS (NM_004816) promoter-TSS (NM_004816) -460 NM_004816 9413 Hs.118003 NM_004816 ENSG00000135063 FAM189A2 C9orf61|X123 family with sequence similarity 189 member A2 protein-coding chr17-4715 chr17 31721995 31722205 + 11.3 0.000 Intergenic Intergenic 136862 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr8-4241 chr8 90135458 90135668 + 11.3 0.000 Intergenic Intergenic -52684 NM_001366795 793 Hs.65425 NM_004929 ENSG00000104327 CALB1 CALB|D-28K calbindin 1 protein-coding chr2-11630 chr2 4957254 4957464 + 11.3 0.000 Intergenic MER5A|DNA|hAT-Charlie -301137 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr1-7708 chr1 25014917 25015127 + 11.3 0.000 Intergenic AluSz|SINE|Alu -8481 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr4-2180 chr4 108988976 108989186 + 11.3 0.000 intron (NM_198721, intron 5 of 36) intron (NM_198721, intron 5 of 36) -226028 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr3-5896 chr3 38647211 38647421 + 11.3 0.000 intron (NM_198056, intron 1 of 27) L2b|LINE|L2 2356 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr13-1863 chr13 20131852 20132062 + 11.3 0.000 Intergenic L2a|LINE|L2 29095 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr4-2798 chr4 28219703 28219913 + 11.3 0.000 Intergenic Intergenic -599774 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr3-3367 chr3 44048058 44048268 + 11.3 0.000 Intergenic Intergenic -66049 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr22-3541 chr22 16068585 16068795 + 11.3 0.000 Intergenic ALR/Alpha|Satellite|centr -247806 NR_133911 106480334 Hs.643607 NR_133911 ENSG00000232775 BMS1P22 - BMS1 pseudogene 22 pseudo chr3-2801 chr3 7504843 7505053 + 11.3 0.000 intron (NM_000844, intron 7 of 9) MSTD-int|LTR|ERVL-MaLR 30336 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr1-7720 chr1 27319911 27320121 + 11.3 0.000 Intergenic L2b|LINE|L2 -2129 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding chr17-2747 chr17 79408260 79408470 + 11.3 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 107783 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr6-4384 chr6 23694287 23694497 + 11.3 0.000 Intergenic MIRb|SINE|MIR -431823 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr2-7413 chr2 9472512 9472722 + 11.3 0.000 intron (NM_016207, intron 17 of 17) intron (NM_016207, intron 17 of 17) -1934 NM_001320859 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr5-1936 chr5 181086824 181087034 + 11.3 0.000 Intergenic Intergenic 38375 NM_001258283 26693 Hs.742585 NM_001258283 ENSG00000185372 OR2V1 OR2V1P|OST265 olfactory receptor family 2 subfamily V member 1 protein-coding chr9-2453 chr9 16987092 16987302 + 11.3 0.000 Intergenic Intergenic -116527 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr10-1884 chr10 103407554 103407764 + 11.3 0.000 intron (NM_014976, intron 7 of 35) AluJo|SINE|Alu 11033 NM_014976 22984 Hs.239499 NM_014976 ENSG00000148843 PDCD11 ALG-4|ALG4|NFBP|RRP5 programmed cell death 11 protein-coding chr2-2517 chr2 175587114 175587324 + 11.3 0.000 Intergenic Intergenic -405509 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr20-3166 chr20 41615235 41615445 + 11.3 0.000 intron (NM_032221, intron 1 of 36) intron (NM_032221, intron 1 of 36) 3037 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr1-4041 chr1 202154851 202155061 + 11.3 0.000 intron (NM_001199797, intron 5 of 9) intron (NM_001199797, intron 5 of 9) 4498 NM_001364878 5778 Hs.402773 NM_002832 ENSG00000143851 PTPN7 BPTP-4|HEPTP|LC-PTP|LPTP|PTPNI protein tyrosine phosphatase non-receptor type 7 protein-coding chr1-9564 chr1 41918674 41918884 + 11.3 0.000 non-coding (NR_038260, exon 1 of 3) non-coding (NR_038260, exon 1 of 3) 143 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr6-4040 chr6 131146581 131146791 + 11.3 0.000 intron (NM_016377, intron 2 of 7) intron (NM_016377, intron 2 of 7) 11219 NM_016377 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr2-5174 chr2 31413145 31413355 + 11.3 0.000 intron (NM_000379, intron 1 of 35) intron (NM_000379, intron 1 of 35) 1492 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr2-8382 chr2 112033112 112033322 + 11.3 0.000 Intergenic Intergenic -22052 NM_001329914 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr11-5031 chr11 84986450 84986660 + 11.3 0.000 intron (NM_001351274, intron 5 of 26) L1PB1|LINE|L1 -63134 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr3-7526 chr3 177149231 177149441 + 11.3 0.000 intron (NM_001321194, intron 1 of 16) MLT1N2|LTR|ERVL-MaLR 47142 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr5-3346 chr5 135787021 135787231 + 11.3 0.000 intron (NM_001349335, intron 3 of 10) SATR2|Satellite|Satellite 15949 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr10-1995 chr10 49288594 49288804 + 11.3 0.000 Intergenic Intergenic 10194 NR_108038 100506769 Hs.562293 NR_108038 C10orf71-AS1 - C10orf71 antisense RNA 1 ncRNA chr11-4987 chr11 72066911 72067121 + 11.3 0.000 intron (NM_001286561, intron 2 of 26) intron (NM_001286561, intron 2 of 26) 5286 NR_036123 100422953 NR_036123 ENSG00000263742 MIR3165 mir-3165 microRNA 3165 ncRNA chr7-4559 chr7 5579693 5579903 + 11.3 0.000 Intergenic Intergenic -13018 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr7-3021 chr7 74650066 74650276 + 11.3 0.000 Intergenic MER44A|DNA|TcMar-Tigger -7494 NM_001280800 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr11-3248 chr11 73287583 73287793 + 11.3 0.000 intron (NM_001277207, intron 2 of 2) ERV3-16A3_LTR|LTR|ERVL 15546 NM_001277204 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr18-1445 chr18 35050915 35051125 + 11.3 0.000 intron (NR_046177, intron 1 of 6) intron (NR_046177, intron 1 of 6) 9607 NR_046177 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr1-13843 chr1 20199788 20199998 + 11.3 0.000 Intergenic Intergenic -13407 NR_110078 101928017 Hs.550803 NR_110078 ENSG00000225986 UBXN10-AS1 - UBXN10 antisense RNA 1 ncRNA chr2-6477 chr2 171410129 171410339 + 11.3 0.000 intron (NM_024770, intron 1 of 9) Tigger16b|DNA|TcMar-Tigger 23756 NM_001321154 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr4-5016 chr4 139415027 139415237 + 11.3 0.000 Intergenic MER11A|LTR|ERVK 38909 NR_159964 107984036 Hs.605782 NR_159963 LOC107984036 - uncharacterized LOC107984036 ncRNA chr6-4633 chr6 47097337 47097547 + 11.3 0.000 Intergenic Intergenic -55110 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr16-1524 chr16 55508879 55509089 + 11.3 0.000 promoter-TSS (NM_017839) promoter-TSS (NM_017839) -88 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding chr16-2460 chr16 85591619 85591829 + 11.3 0.000 Intergenic Intergenic -19685 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr10-5167 chr10 57933235 57933445 + 11.3 0.000 Intergenic L1P1|LINE|L1 334554 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr2-3596 chr2 71336877 71337087 + 11.3 0.000 intron (NM_001252613, intron 1 of 27) intron (NM_001252613, intron 1 of 27) 5200 NM_014497 27332 Hs.434401 NM_014497 ENSG00000075292 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding chr22-2657 chr22 36130360 36130570 + 11.3 0.000 Intergenic Intergenic 30290 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr14-2319 chr14 92647537 92647747 + 11.3 0.000 intron (NM_024832, intron 5 of 9) L1ME4a|LINE|L1 71408 NM_001319987 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chrX-1179 chrX 53380362 53380572 + 11.3 0.000 intron (NM_001281463, intron 25 of 25) intron (NM_001281463, intron 25 of 25) 25298 NR_106916 102465516 NR_106916 ENSG00000278204 MIR6857 hsa-mir-6857 microRNA 6857 ncRNA chrX-2623 chrX 108812016 108812226 + 11.3 0.000 Intergenic Intergenic 75581 NR_110652 101928358 Hs.722300 NR_110652 ENSG00000237863 LOC101928358 - uncharacterized LOC101928358 ncRNA chr10-4202 chr10 107598193 107598403 + 11.3 0.000 Intergenic Intergenic -433592 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr12-617 chr12 123533762 123533972 + 11.3 0.000 promoter-TSS (NM_001319243) promoter-TSS (NM_001319243) -148 NM_178314 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr3-4535 chr3 127236344 127236554 + 11.3 0.000 Intergenic L1M5|LINE|L1 43318 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr1-5552 chr1 232726526 232726736 + 11.3 0.000 TTS (NR_110683) TTS (NR_110683) 8560 NR_146922 105373199 Hs.254475 NR_146922 ENSG00000225919 LINC01745 - long intergenic non-protein coding RNA 1745 ncRNA chr21-591 chr21 43740425 43740635 + 11.3 0.000 promoter-TSS (NM_001331030) promoter-TSS (NM_001331030) -956 NM_001331030 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr2-7569 chr2 24756841 24757051 + 11.3 0.000 intron (NM_001362950, intron 20 of 23) intron (NM_001362950, intron 20 of 23) -36169 NM_024322 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr4-7460 chr4 69925538 69925748 + 11.3 0.000 Intergenic AluSz6|SINE|Alu -5425 NM_001890 1446 Hs.3155 NM_001890 ENSG00000126545 CSN1S1 CASA|CSN1 casein alpha s1 protein-coding chr18-1889 chr18 29051342 29051552 + 11.3 0.000 Intergenic L1PA7|LINE|L1 -874317 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-3953 chr2 64957455 64957665 + 11.3 0.000 Intergenic LTR79|LTR|ERVL -25113 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr12-5384 chr12 120554880 120555090 + 11.3 0.000 intron (NM_014868, intron 4 of 16) intron (NM_014868, intron 4 of 16) 20629 NM_001330474 9921 Hs.442798 NM_014868 ENSG00000022840 RNF10 RIE2 ring finger protein 10 protein-coding chr1-7096 chr1 196400899 196401109 + 11.3 0.000 intron (NM_001287820, intron 12 of 26) L1MC2|LINE|L1 181477 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chr6-1901 chr6 4313203 4313413 + 11.3 0.000 Intergenic L1M3f|LINE|L1 -123279 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr1-7934 chr1 169107795 169108005 + 11.3 0.000 intron (NM_001677, intron 1 of 5) (CAT)n|Simple_repeat|Simple_repeat 1210 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr8-5855 chr8 13361538 13361748 + 11.3 0.000 intron (NM_024767, intron 4 of 4) intron (NM_024767, intron 4 of 4) -84859 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr19-2789 chr19 46887565 46887775 + 11.3 0.000 intron (NM_004491, intron 1 of 6) intron (NM_004491, intron 1 of 6) 26673 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr11-10205 chr11 96707085 96707295 + 11.3 0.000 Intergenic Intergenic 198765 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr20-2972 chr20 36018651 36018861 + 11.3 0.000 intron (NR_130714, intron 8 of 8) intron (NR_130714, intron 8 of 8) 32204 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr1-9711 chr1 52709157 52709367 + 11.3 0.000 Intergenic Intergenic -10915 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding KI270853.1-1 KI270853.1 1085500 1085710 + 11.3 0.000 NA NA NA NA chr12-4930 chr12 68843577 68843787 + 11.3 0.000 3' UTR (NM_001278462, exon 6 of 6) 3' UTR (NM_001278462, exon 6 of 6) 34658 NM_001145337 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding chr20-3746 chr20 18967094 18967304 + 11.3 0.000 Intergenic L1PA10|LINE|L1 -136996 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr7-6004 chr7 104254515 104254725 + 11.3 0.000 Intergenic Intergenic -46573 NM_181747 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chr22-2191 chr22 46557084 46557294 + 11.3 0.000 Intergenic L2b|LINE|L2 -19569 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr10-7739 chr10 32506051 32506261 + 11.3 0.000 intron (NM_145023, intron 10 of 17) SVA_A|Retroposon|SVA 60016 NR_109826 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding chr3-801 chr3 195353025 195353235 + 11.3 0.000 intron (NM_012287, intron 4 of 22) MLT1F1|LTR|ERVL-MaLR -81971 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr2-13782 chr2 172210124 172210334 + 11.3 0.000 Intergenic AluSz6|SINE|Alu 107223 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr10-2710 chr10 103933516 103933726 + 11.3 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -15437 NM_024928 79991 Hs.62314 NM_024928 ENSG00000107960 STN1 AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2 STN1 subunit of CST complex protein-coding chr8-2042 chr8 115600636 115600846 + 11.3 0.000 intron (NM_001282902, intron 3 of 5) intron (NM_001282902, intron 3 of 5) 67272 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr9-7124 chr9 131270795 131271005 + 11.3 0.000 intron (NM_033387, intron 1 of 1) intron (NM_033387, intron 1 of 1) 5610 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr22-1846 chr22 37978925 37979135 + 11.3 0.000 intron (NM_006941, intron 2 of 3) AluSx|SINE|Alu 5502 NM_006941 6663 Hs.376984 NM_006941 ENSG00000100146 SOX10 DOM|PCWH|WS2E|WS4|WS4C SRY-box transcription factor 10 protein-coding chr22-1471 chr22 50656423 50656633 + 11.3 0.000 Intergenic Intergenic -18114 NM_033517 85358 Hs.149035 NM_033517 ENSG00000251322 SHANK3 DEL22q13.3|PROSAP2|PSAP2|SCZD15|SPANK-2 SH3 and multiple ankyrin repeat domains 3 protein-coding chr11-5757 chr11 3239927 3240137 + 11.3 0.000 Intergenic MER4B-int|LTR|ERV1 -7615 NM_001039165 116534 Hs.745512 NM_001039165 ENSG00000184350 MRGPRE GPR167|MGRF|MRGE MAS related GPR family member E protein-coding chr5-2141 chr5 84242332 84242542 + 11.3 0.000 intron (NM_005711, intron 2 of 10) intron (NM_005711, intron 2 of 10) 142430 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr7-2680 chr7 17234511 17234721 + 11.3 0.000 Intergenic Intergenic -64036 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr1-7763 chr1 39305801 39306011 + 11.3 0.000 intron (NM_012090, intron 22 of 92) L2a|LINE|L2 -103167 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr7-6100 chr7 118701029 118701239 + 11.3 0.000 Intergenic Intergenic 476430 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr3-2789 chr3 195886235 195886445 + 11.3 0.000 intron (NM_001010938, intron 3 of 14) intron (NM_001010938, intron 3 of 14) -3945 NR_106887 102465977 NR_106887 ENSG00000276489 MIR6829 hsa-mir-6829 microRNA 6829 ncRNA chr9-2461 chr9 32379247 32379457 + 11.3 0.000 Intergenic Intergenic -5251 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr10-2785 chr10 129461752 129461962 + 11.3 0.000 Intergenic Intergenic -5384 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr5-4135 chr5 84724771 84724981 + 11.3 0.000 Intergenic Intergenic -339996 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr6-2678 chr6 15793206 15793416 + 11.3 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -130253 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr12-6948 chr12 26488201 26488411 + 11.3 0.000 intron (NM_002223, intron 39 of 56) intron (NM_002223, intron 39 of 56) 292733 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr7-6338 chr7 147303803 147304013 + 11.3 0.000 intron (NM_014141, intron 8 of 22) intron (NM_014141, intron 8 of 22) 74213 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr5-4208 chr5 121583253 121583463 + 11.3 0.000 Intergenic Intergenic 260808 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr2-12277 chr2 46026555 46026765 + 11.3 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -270747 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr12-3291 chr12 75690687 75690897 + 11.3 0.000 Intergenic Charlie21a|DNA|hAT-Charlie -179183 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr2-5761 chr2 221309186 221309396 + 11.3 0.000 Intergenic Intergenic 263013 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr9-2419 chr9 135029423 135029633 + 11.3 0.000 Intergenic Intergenic -45977 NM_006334 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr3-2099 chr3 37287941 37288151 + 11.3 0.000 intron (NM_001172713, intron 5 of 22) intron (NM_001172713, intron 5 of 22) -43851 NR_149029 152048 Hs.596176 NM_152532 ENSG00000270194 LOC152048 - uncharacterized FLJ31715 ncRNA chr16-4205 chr16 12024756 12024966 + 11.3 0.000 intron (NM_032167, intron 3 of 20) intron (NM_032167, intron 3 of 20) 48127 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr11-8518 chr11 125229560 125229770 + 11.3 0.000 intron (NM_022062, intron 1 of 12) intron (NM_022062, intron 1 of 12) 64914 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr21-576 chr21 46267711 46267921 + 11.3 0.000 intron (NM_003906, intron 9 of 27) AluJb|SINE|Alu 17795 NM_003906 8888 Hs.389037 NM_003906 ENSG00000160294 MCM3AP GANP|MAP80|PNRIID|SAC3 minichromosome maintenance complex component 3 associated protein protein-coding chrX-594 chrX 119575199 119575409 + 11.3 0.000 intron (NM_003336, intron 2 of 5) intron (NM_003336, intron 2 of 5) 741 NM_181762 7319 Hs.379466 NM_003336 ENSG00000077721 UBE2A HHR6A|MRXS30|MRXSN|RAD6A|UBC2 ubiquitin conjugating enzyme E2 A protein-coding chr19-3477 chr19 35820103 35820313 + 11.3 0.000 Intergenic MER20B|DNA|hAT-Charlie -6909 NM_021232 58510 Hs.515366 NM_021232 ENSG00000250799 PRODH2 HSPOX1|HYPDH proline dehydrogenase 2 protein-coding chr3-4251 chr3 142908067 142908277 + 11.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -18503 NR_038455 100507389 Hs.38715 NR_038455 ENSG00000243818 LOC100507389 - uncharacterized LOC100507389 ncRNA chr11-3328 chr11 113308316 113308526 + 11.3 0.000 Intergenic Intergenic -6162 NM_001352038 54970 Hs.288772 NM_017868 ENSG00000149292 TTC12 TPARM tetratricopeptide repeat domain 12 protein-coding chr12-638 chr12 122422407 122422617 + 11.3 0.000 promoter-TSS (NM_001247997) promoter-TSS (NM_001247997) 57 NM_002956 6249 Hs.524809 NM_002956 ENSG00000130779 CLIP1 CLIP|CLIP-170|CLIP170|CYLN1|RSN CAP-Gly domain containing linker protein 1 protein-coding chr6-3011 chr6 45991266 45991476 + 11.3 0.000 intron (NM_001370649, intron 1 of 5) MLT1E|LTR|ERVL-MaLR 24489 NM_016929 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr8-2993 chr8 101514272 101514482 + 11.3 0.000 intron (NM_001330593, intron 1 of 15) LTR16B2|LTR|ERVL 21938 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr17-1947 chr17 81484353 81484563 + 11.3 0.000 Intergenic CpG 28341 NM_001614 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr10-4114 chr10 69973273 69973483 + 11.3 0.000 Intergenic Intergenic -79468 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr20-904 chr20 46715289 46715499 + 11.3 0.000 intron (NM_030777, intron 1 of 4) intron (NM_030777, intron 1 of 4) 5745 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATORS|ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr1-4839 chr1 26315366 26315576 + 11.3 0.000 intron (NM_145345, intron 1 of 14) intron (NM_145345, intron 1 of 14) -2487 NM_001803 1043 Hs.276770 NM_001803 ENSG00000169442 CD52 CDW52|EDDM5|HE5 CD52 molecule protein-coding chr5-4483 chr5 8717435 8717645 + 11.3 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -122192 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr16-2188 chr16 70741200 70741410 + 11.3 0.000 intron (NM_001351157, intron 12 of 17) intron (NM_001351157, intron 12 of 17) -13790 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr1-9270 chr1 25162113 25162323 + 11.3 0.000 Intergenic L1MC|LINE|L1 70284 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr3-6253 chr3 68787791 68788001 + 11.3 0.000 intron (NM_001005527, intron 3 of 5) MER102b|DNA|hAT-Charlie 144651 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr5-3145 chr5 64716727 64716937 + 11.3 0.000 intron (NM_001164442, intron 2 of 2) L2a|LINE|L2 26329 NM_001164442 100132916 Hs.591776 NM_001164442 ENSG00000145642 SHISAL2B FAM159B shisa like 2B protein-coding chr1-10563 chr1 173620410 173620620 + 11.3 0.000 intron (NM_198493, intron 5 of 5) L1PA11|LINE|L1 -14823 NM_001195190 730159 Hs.647757 NM_001195190 ENSG00000232113 TEX50 - testis expressed 50 protein-coding chr14-1682 chr14 77862105 77862315 + 11.3 0.000 intron (NM_001366489, intron 4 of 9) intron (NM_001366489, intron 4 of 9) 62101 NM_001366488 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr5-1937 chr5 176510 176720 + 11.3 0.000 intron (NM_052909, intron 18 of 19) LTR24|LTR|ERV1 -14880 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr8-3886 chr8 38298392 38298602 + 11.3 0.000 intron (NM_023034, intron 15 of 23) intron (NM_023034, intron 15 of 23) -29265 NM_001354454 84513 Hs.567619 NM_032483 ENSG00000147535 PLPP5 DPPL1|HTPAP|PPAPDC1B phospholipid phosphatase 5 protein-coding chr17-2995 chr17 72691631 72691841 + 11.3 0.000 intron (NM_001352692, intron 7 of 9) Charlie13b|DNA|hAT-Charlie -51264 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr9-1860 chr9 38642183 38642393 + 11.3 0.000 Intergenic Intergenic 21200 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr2-3260 chr2 240870502 240870712 + 11.3 0.000 intron (NM_000030, intron 2 of 10) intron (NM_000030, intron 2 of 10) 1783 NM_000030 189 Hs.144567 NM_000030 ENSG00000172482 AGXT AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6 alanine--glyoxylate and serine--pyruvate aminotransferase protein-coding chr12-3297 chr12 76953184 76953394 + 11.3 0.000 Intergenic Intergenic -74270 NM_001321 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr10-5246 chr10 66457805 66458015 + 11.3 0.000 intron (NM_001127384, intron 11 of 17) LTR75|LTR|ERVL -468126 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr1-6674 chr1 51345695 51345905 + 11.3 0.000 promoter-TSS (NM_001144832) promoter-TSS (NM_001144832) -684 NM_001144832 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr1-5024 chr1 78301338 78301548 + 11.3 0.000 intron (NR_027310, intron 3 of 5) L1MEc|LINE|L1 71844 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr10-4632 chr10 123312671 123312881 + 11.3 0.000 Intergenic Intergenic 158374 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr12-2097 chr12 49549309 49549519 + 11.3 0.000 intron (NM_012284, intron 8 of 14) CpG 10384 NM_012284 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr5-4039 chr5 38853086 38853296 + 11.3 0.000 intron (NM_003999, intron 1 of 17) L1M5|LINE|L1 7179 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr1-7289 chr1 240766124 240766334 + 11.3 0.000 Intergenic Intergenic -154074 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr10-2862 chr10 76119495 76119705 + 11.3 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 336839 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr22-1384 chr22 37212584 37212794 + 11.3 0.000 promoter-TSS (NM_001051) promoter-TSS (NM_001051) -212 NM_001051 6753 Hs.225995 NM_001051 ENSG00000278195 SSTR3 SS-3-R|SS3-R|SS3R|SSR-28 somatostatin receptor 3 protein-coding chr16-2419 chr16 73413087 73413297 + 11.3 0.000 intron (NR_038234, intron 1 of 2) intron (NR_038234, intron 1 of 2) 26387 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr6-2909 chr6 14984486 14984696 + 11.3 0.000 Intergenic Intergenic -261478 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr3-5830 chr3 31307766 31307976 + 11.3 0.000 Intergenic Intergenic -146084 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr5-5033 chr5 86687098 86687308 + 11.3 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -59615 NR_105017 100505878 Hs.246405 NR_105017 LINC02059 - long intergenic non-protein coding RNA 2059 ncRNA chr16-3144 chr16 74584185 74584395 + 11.3 0.000 intron (NR_027264, intron 1 of 26) intron (NR_027264, intron 1 of 26) 22824 NM_012201 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr11-10329 chr11 109697097 109697307 + 11.3 0.000 Intergenic L1PA16|LINE|L1 275012 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr20-3848 chr20 24960366 24960576 + 11.3 0.000 TTS (NM_003650) TTS (NM_003650) 11202 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr12-2891 chr12 47070133 47070343 + 11.3 0.000 Intergenic Intergenic -9365 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chr18-1264 chr18 57807818 57808028 + 11.3 0.000 Intergenic Intergenic -4608 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr5-3573 chr5 72412336 72412546 + 11.3 0.000 Intergenic Intergenic 92068 NM_001284403 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr6-5353 chr6 149196341 149196551 + 11.3 0.000 Intergenic MamRTE1|LINE|RTE-BovB -21478 NR_125861 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr2-4459 chr2 219158599 219158809 + 11.3 0.000 intron (NM_024782, intron 1 of 7) intron (NM_024782, intron 1 of 7) 2161 NM_024782 79840 Hs.225988 NM_024782 ENSG00000187736 NHEJ1 XLF non-homologous end joining factor 1 protein-coding chr4-3440 chr4 85914676 85914886 + 11.3 0.000 intron (NM_001287805, intron 1 of 7) intron (NM_001287805, intron 1 of 7) -15235 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr19-1220 chr19 8005633 8005843 + 11.3 0.000 promoter-TSS (NM_001419) promoter-TSS (NM_001419) -97 NM_001419 1994 Hs.184492 NM_001419 ENSG00000066044 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding chr20-518 chr20 18705523 18705733 + 11.3 0.000 intron (NM_080820, intron 4 of 5) intron (NM_080820, intron 4 of 5) -6920 NR_109955 101929526 Hs.639402 NR_109955 ENSG00000233993 LOC101929526 - uncharacterized LOC101929526 ncRNA chr12-1712 chr12 10213379 10213589 + 11.3 0.000 intron (NM_001363598, intron 1 of 2) intron (NM_001363598, intron 1 of 2) 607 NM_031412 23710 Hs.524250 NM_031412 ENSG00000139112 GABARAPL1 APG8-LIKE|APG8L|ATG8|ATG8B|ATG8L|GEC1 GABA type A receptor associated protein like 1 protein-coding chr17-2019 chr17 4947713 4947923 + 11.3 0.000 intron (NM_005022, intron 1 of 2) CpG 1268 NM_005022 5216 Hs.494691 NM_005022 ENSG00000108518 PFN1 ALS18 profilin 1 protein-coding chr15-374 chr15 80989896 80990106 + 11.3 0.000 promoter-TSS (NM_015154) promoter-TSS (NM_015154) -182 NM_015154 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr11-4455 chr11 101134359 101134569 + 11.3 0.000 intron (NR_073144, intron 3 of 4) L1ME1|LINE|L1 -4651 NM_000926 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr12-4960 chr12 74286221 74286431 + 11.3 0.000 intron (NR_038300, intron 1 of 6) intron (NR_038300, intron 1 of 6) 6305 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr8-2745 chr8 106695259 106695469 + 11.3 0.000 intron (NM_181354, intron 5 of 13) L1MEc|LINE|L1 -30743 NM_001198534 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr16-999 chr16 46790007 46790217 + 11.3 0.000 Intergenic CpG -26866 NM_001308301 91807 Hs.130465 NM_182493 ENSG00000140795 MYLK3 MLCK|MLCK2|caMLCK myosin light chain kinase 3 protein-coding chr10-1438 chr10 48501823 48502033 + 11.3 0.000 intron (NR_144642, intron 3 of 9) intron (NR_144642, intron 3 of 9) -8278 NM_001256026 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr5-4754 chr5 52896510 52896720 + 11.3 0.000 intron (NM_181501, intron 9 of 28) intron (NM_181501, intron 9 of 28) -92737 NR_073105 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr4-1308 chr4 126916762 126916972 + 11.3 0.000 Intergenic Intergenic -716090 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr2-8557 chr2 134082079 134082289 + 11.3 0.000 Intergenic L1MC1|LINE|L1 -37751 NM_001371457 chr12-2417 chr12 49116161 49116371 + 11.3 0.000 Intergenic LTR5A|LTR|ERVK -5366 NM_001352163 55716 Hs.272838 NM_018113 ENSG00000139636 LMBR1L LIMR limb development membrane protein 1 like protein-coding chr4-3291 chr4 143914815 143915025 + 11.3 0.000 intron (NR_125886, intron 2 of 6) L1PBa|LINE|L1 2589 NR_125886 101927636 Hs.658686 NR_125886 ENSG00000251600 LOC101927636 - uncharacterized LOC101927636 ncRNA chr10-2941 chr10 26544849 26545059 + 11.3 0.000 intron (NM_019043, intron 11 of 14) intron (NM_019043, intron 11 of 14) 34353 NR_134472 101929117 Hs.127031 NR_134472 LOC101929117 - uncharacterized LOC101929117 ncRNA chr1-5897 chr1 8822773 8822983 + 11.3 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -5238 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr10-4230 chr10 124450563 124450773 + 11.3 0.000 promoter-TSS (NM_001146340) promoter-TSS (NM_001146340) -633 NM_001146340 390010 Hs.290255 NM_001146340 ENSG00000229544 NKX1-2 C10orf121|NKX-1.1|bB238F13.2 NK1 homeobox 2 protein-coding chr17-1540 chr17 81370197 81370407 + 11.3 0.000 Intergenic AluSx|SINE|Alu 14823 NM_001347841 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr11-5726 chr11 2337143 2337353 + 11.3 0.000 intron (NR_108080, intron 1 of 2) HERVIP10FH-int|LTR|ERV1 -34108 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr7-4506 chr7 443695 443905 + 11.3 0.000 Intergenic (GGAT)n|Simple_repeat|Simple_repeat 64375 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr11-7546 chr11 15912842 15913052 + 11.3 0.000 Intergenic Intergenic 56674 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr3-4386 chr3 193572627 193572837 + 11.3 0.000 Intergenic Intergenic -17837 NM_032279 84239 Hs.674423 NM_032279 ENSG00000127249 ATP13A4 - ATPase 13A4 protein-coding chr19-4919 chr19 42662209 42662419 + 11.3 0.000 Intergenic Intergenic -67390 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr21-458 chr21 25963380 25963590 + 11.3 0.000 intron (NM_001136131, intron 9 of 15) intron (NM_001136131, intron 9 of 15) 176905 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr3-2383 chr3 177570567 177570777 + 11.3 0.000 intron (NR_047568, intron 2 of 3) L2c|LINE|L2 128751 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr11-6465 chr11 67252013 67252223 + 11.3 0.000 intron (NM_001256405, intron 6 of 9) intron (NM_001256405, intron 6 of 9) 12104 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr22-2916 chr22 46583168 46583378 + 11.3 0.000 intron (NM_001366660, intron 1 of 17) L1MC3|LINE|L1 6185 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr1-3672 chr1 155094308 155094518 + 11.3 0.000 Intergenic Intergenic 15576 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr4-2259 chr4 169039107 169039317 + 11.3 0.000 Intergenic Intergenic -28957 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr3-3113 chr3 146313422 146313632 + 11.3 0.000 Intergenic L1MA9|LINE|L1 -62348 NM_001128306 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr17-4299 chr17 78252010 78252220 + 11.3 0.000 Intergenic Intergenic 20805 NM_001204210 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr1-10449 chr1 160266737 160266947 + 11.3 0.000 Intergenic Intergenic -4293 NR_028103 50717 Hs.632447 NM_015726 ENSG00000132716 DCAF8 GAN2|H326|WDR42A DDB1 and CUL4 associated factor 8 protein-coding chr4-5931 chr4 151612699 151612909 + 11.3 0.000 intron (NM_001109977, intron 7 of 13) intron (NM_001109977, intron 7 of 13) 148203 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr22-1214 chr22 35336130 35336340 + 11.3 0.000 TTS (NR_037471) TTS (NR_037471) 564 NR_106717 102464824 NR_106717 ENSG00000274280 MIR6069 hsa-mir-6069 microRNA 6069 ncRNA chr2-7521 chr2 20998477 20998687 + 11.3 0.000 Intergenic Intergenic 45491 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr3-3442 chr3 136659455 136659665 + 11.3 0.000 intron (NM_005862, intron 1 of 33) intron (NM_005862, intron 1 of 33) 92818 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr12-1624 chr12 104695627 104695837 + 11.3 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 104099 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr1-12792 chr1 82464264 82464474 + 11.3 0.000 Intergenic Intergenic -438814 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr4-3068 chr4 145179085 145179295 + 11.3 0.000 intron (NM_001366057, intron 1 of 20) intron (NM_001366057, intron 1 of 20) 490 NM_001102653 54726 Hs.270851 NM_017493 ENSG00000164164 OTUD4 DUBA6|HIN1|HSHIN1 OTU deubiquitinase 4 protein-coding chr1-6865 chr1 112093183 112093393 + 11.3 0.000 Intergenic Intergenic 102752 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr10-4375 chr10 38231415 38231625 + 11.3 0.000 Intergenic Intergenic 55849 NR_024524 100129055 Hs.148265 NR_024524 LOC100129055 - cyclin Y like 1 pseudogene pseudo chr3-6411 chr3 99966978 99967188 + 11.3 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) -2685 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr7-5513 chr7 44250650 44250860 + 11.3 0.000 intron (NM_172081, intron 5 of 18) AluSg|SINE|Alu 49777 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr22-1364 chr22 29364258 29364468 + 11.3 0.000 intron (NM_001166019, intron 2 of 20) intron (NM_001166019, intron 2 of 20) 24207 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr12-5226 chr12 107916336 107916546 + 11.3 0.000 Intergenic AluJb|SINE|Alu -12670 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr6-2109 chr6 169204622 169204832 + 11.3 0.000 Intergenic L1MB5|LINE|L1 -8485 NR_134621 101929523 Hs.442696 NR_134621 ENSG00000226445 LOC101929523 - uncharacterized LOC101929523 ncRNA chr17-3947 chr17 62064855 62065065 + 11.3 0.000 intron (NM_005121, intron 1 of 29) CpG 318 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr17-2997 chr17 73130516 73130726 + 11.3 0.000 Intergenic L1MB2|LINE|L1 -34389 NM_001050 6752 Hs.514451 NM_001050 ENSG00000180616 SSTR2 - somatostatin receptor 2 protein-coding chr8-1570 chr8 125091843 125092053 + 11.3 0.000 promoter-TSS (NM_001330609) promoter-TSS (NM_001330609) 88 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding chr5-2015 chr5 34531861 34532071 + 11.3 0.000 Intergenic Intergenic -124362 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr9-3719 chr9 114135844 114136054 + 11.3 0.000 Intergenic Intergenic -19588 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr4-2636 chr4 156060776 156060986 + 11.3 0.000 Intergenic MER3|DNA|hAT-Charlie -107015 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr9-8006 chr9 94212403 94212613 + 11.3 0.000 intron (NR_160773, intron 1 of 2) intron (NR_160773, intron 1 of 2) -7942 NR_046163 158257 Hs.652626 NR_046163 ENSG00000230262 LINC02603 MIRLET7DHG long intergenic non-protein coding RNA 2603 ncRNA chrX-4090 chrX 23471100 23471310 + 11.3 0.000 Intergenic LTR33|LTR|ERVL 136356 NM_173495 139411 Hs.319503 NM_173495 ENSG00000165186 PTCHD1 AUTSX4 patched domain containing 1 protein-coding chr8-2533 chr8 26020561 26020771 + 11.3 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 24747 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr16-2660 chr16 57535127 57535337 + 11.3 0.000 intron (NM_033212, intron 1 of 8) intron (NM_033212, intron 1 of 8) 1339 NM_033212 92922 Hs.644611 NM_033212 ENSG00000135736 CCDC102A - coiled-coil domain containing 102A protein-coding chr3-9964 chr3 95319860 95320070 + 11.3 0.000 Intergenic MLT1E|LTR|ERVL-MaLR 363228 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr17-1243 chr17 2359733 2359943 + 11.3 0.000 intron (NM_001346700, intron 2 of 22) intron (NM_001346700, intron 2 of 22) 22337 NM_014853 9905 Hs.513861 NM_014853 ENSG00000141258 SGSM2 RUTBC1 small G protein signaling modulator 2 protein-coding chr10-5405 chr10 75524601 75524811 + 11.3 0.000 intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) -27752 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA chr3-6908 chr3 156690755 156690965 + 11.3 0.000 intron (NM_015508, intron 2 of 5) intron (NM_015508, intron 2 of 5) 14196 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr1-4624 chr1 157773643 157773853 + 11.3 0.000 intron (NM_001159488, intron 2 of 8) intron (NM_001159488, intron 2 of 8) 3384 NR_125358 79368 Hs.437393 NM_030764 ENSG00000132704 FCRL2 CD307b|FCRH2|IFGP4|IRTA4|SPAP1|SPAP1A|SPAP1B|SPAP1C Fc receptor like 2 protein-coding chr3-6403 chr3 99091142 99091352 + 11.3 0.000 Intergenic Intergenic -189552 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr4-1898 chr4 20266671 20266881 + 11.3 0.000 intron (NM_001289135, intron 3 of 35) L2c|LINE|L2 14871 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr4-4284 chr4 25670312 25670522 + 11.3 0.000 intron (NM_001177999, intron 7 of 12) intron (NM_001177999, intron 7 of 12) 13953 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr12-7875 chr12 105594720 105594930 + 11.3 0.000 Intergenic L2b|LINE|L2 -109378 NR_110108 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr1-4404 chr1 200659344 200659554 + 11.3 0.000 intron (NM_001031725, intron 3 of 7) L2b|LINE|L2 7302 NM_001320182 83479 Hs.497332 NM_031306 ENSG00000118197 DDX59 OFD5|ZNHIT5 DEAD-box helicase 59 protein-coding chr12-1286 chr12 108561213 108561423 + 11.3 0.000 promoter-TSS (NM_014706) promoter-TSS (NM_014706) -145 NM_014706 9733 Hs.584842 NM_014706 ENSG00000075856 SART3 DSAP1|P100|RP11-13G14|TIP110|p110|p110(nrb) spliceosome associated factor 3, U4/U6 recycling protein protein-coding chr3-2830 chr3 16183710 16183920 + 11.3 0.000 intron (NM_001319051, intron 1 of 9) intron (NM_001319051, intron 1 of 9) 9135 NM_001319051 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr7-2326 chr7 123309201 123309411 + 11.3 0.000 Intergenic Intergenic -109335 NM_001324400 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr2-5615 chr2 186957078 186957288 + 11.3 0.000 Intergenic AluSq2|SINE|Alu -108013 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr7-5242 chr7 17005566 17005776 + 11.3 0.000 Intergenic Intergenic -123688 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr17-4891 chr17 69388112 69388322 + 11.3 0.000 Intergenic AluSc8|SINE|Alu -26480 NM_002758 5608 Hs.49329 NM_002758 ENSG00000108984 MAP2K6 MAPKK6|MEK6|MKK6|PRKMK6|SAPKK-3|SAPKK3 mitogen-activated protein kinase kinase 6 protein-coding chr10-5722 chr10 101115703 101115913 + 11.3 0.000 intron (NR_130724, intron 2 of 2) intron (NR_130724, intron 2 of 2) 15338 NR_130723 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr22-2106 chr22 29112807 29113017 + 11.3 0.000 intron (NM_001039570, intron 3 of 8) intron (NM_001039570, intron 3 of 8) 39877 NM_032045 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 ECTD13|KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr12-4342 chr12 1561500 1561710 + 11.3 0.000 Intergenic MIR3|SINE|MIR -29413 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr19-1682 chr19 4164597 4164807 + 11.3 0.000 intron (NM_001271997, intron 5 of 8) intron (NM_001271997, intron 5 of 8) 11071 NM_001271996 84699 Hs.247744 NM_032607 ENSG00000060566 CREB3L3 CREB-H|CREBH|HYST1481 cAMP responsive element binding protein 3 like 3 protein-coding chr19-3086 chr19 5065033 5065243 + 11.3 0.000 intron (NM_001370094, intron 6 of 10) intron (NM_001370094, intron 6 of 10) 96025 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr11-4278 chr11 66432520 66432730 + 11.3 0.000 Intergenic AluSq|SINE|Alu 6223 NM_170739 65003 Hs.418450 NM_016050 ENSG00000174547 MRPL11 CGI-113|L11MT|MRP-L11 mitochondrial ribosomal protein L11 protein-coding chr8-2045 chr8 117003317 117003527 + 11.3 0.000 intron (NM_001172811, intron 2 of 9) MIRc|SINE|MIR 52447 NM_001172813 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr21-523 chr21 37010062 37010272 + 11.3 0.000 intron (NM_001317777, intron 2 of 2) intron (NM_001317777, intron 2 of 2) 3465 NM_018962 53820 Hs.254560 NM_018962 ENSG00000183145 RIPPLY3 DSCR6 ripply transcriptional repressor 3 protein-coding chr2-7860 chr2 50484752 50484962 + 11.3 0.000 intron (NM_001330093, intron 15 of 22) intron (NM_001330093, intron 15 of 22) -137101 NM_138735 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr1-11180 chr1 240275964 240276174 + 11.3 0.000 intron (NM_020066, intron 7 of 17) FLAM_C|SINE|Alu 184186 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr7-1709 chr7 1587351 1587561 + 11.3 0.000 non-coding (NR_027328, exon 4 of 4) non-coding (NR_027328, exon 4 of 4) 17383 NR_027328 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr1-8136 chr1 11080371 11080581 + 11.3 0.000 intron (NM_002685, intron 13 of 23) intron (NM_002685, intron 13 of 23) -19199 NR_135062 105376736 Hs.634965 NR_135061 ENSG00000230337 EXOSC10-AS1 - EXOSC10 antisense RNA 1 ncRNA chr2-5237 chr2 47057762 47057972 + 11.3 0.000 intron (NM_001288951, intron 19 of 20) L2c|LINE|L2 97441 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr6-5216 chr6 133978344 133978554 + 11.3 0.000 intron (NM_004865, intron 1 of 6) intron (NM_004865, intron 1 of 6) 25225 NM_004865 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr17-6096 chr17 80950489 80950699 + 11.3 0.000 intron (NM_020761, intron 28 of 33) intron (NM_020761, intron 28 of 33) 20619 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chrX-2748 chrX 129087005 129087215 + 11.3 0.000 Intergenic L1MA5A|LINE|L1 436380 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr15-2699 chr15 85845314 85845524 + 11.3 0.000 Intergenic MamGypLTR3a|LTR|Gypsy 19784 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr4-5120 chr4 150533672 150533882 + 11.3 0.000 intron (NM_001367550, intron 40 of 56) intron (NM_001367550, intron 40 of 56) -45312 NR_149035 729558 Hs.647978 NR_149035 ENSG00000249690 LOC729558 - uncharacterized LOC729558 ncRNA chr5-3280 chr5 113120191 113120401 + 11.3 0.000 intron (NM_001085377, intron 6 of 18) intron (NM_001085377, intron 6 of 18) 143498 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr19-1915 chr19 55579944 55580154 + 11.3 0.000 intron (NM_152600, intron 1 of 1) intron (NM_152600, intron 1 of 1) 799 NM_152600 163033 Hs.112529 NM_152600 ENSG00000218891 ZNF579 - zinc finger protein 579 protein-coding chr16-1666 chr16 68396763 68396973 + 11.3 0.000 intron (NM_018667, intron 1 of 8) intron (NM_018667, intron 1 of 8) 51640 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr3-5506 chr3 195413930 195414140 + 11.3 0.000 intron (NM_012287, intron 1 of 22) L1MC1|LINE|L1 28985 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr7-2098 chr7 4992190 4992400 + 11.3 0.000 intron (NR_015449, intron 5 of 5) MER5A|DNA|hAT-Charlie 18310 NR_023385 441191 Hs.520636 NR_015449 ENSG00000196204 RNF216P1 RNF216L|hCG2040556 ring finger protein 216 pseudogene 1 pseudo chr3-1618 chr3 33980392 33980602 + 11.3 0.000 Intergenic Intergenic 181867 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr7-9499 chr7 137771703 137771913 + 11.3 0.000 intron (NM_001321708, intron 1 of 32) intron (NM_001321708, intron 1 of 32) 74524 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr12-766 chr12 109052453 109052663 + 11.3 0.000 promoter-TSS (NM_032663) promoter-TSS (NM_032663) -18 NM_032663 84749 Hs.486434 NM_032663 ENSG00000135093 USP30 - ubiquitin specific peptidase 30 protein-coding chr10-5883 chr10 116880806 116881016 + 11.3 0.000 TTS (NM_018330) TTS (NM_018330) -31189 NM_001330164 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding chr14-1208 chr14 75388101 75388311 + 11.3 0.000 Intergenic L1MC3|LINE|L1 -39518 NM_001135047 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chr8-3910 chr8 41261285 41261495 + 11.3 0.000 TTS (NM_003012) TTS (NM_003012) 9753 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr3-4778 chr3 115097528 115097738 + 11.3 0.000 intron (NM_001348800, intron 1 of 11) intron (NM_001348800, intron 1 of 11) 2675 NM_001348804 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chrX-1033 chrX 83153195 83153405 + 11.3 0.000 Intergenic L1PA8|LINE|L1 -354990 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr5-2134 chr5 81233205 81233415 + 11.3 0.000 promoter-TSS (NM_001099736) promoter-TSS (NM_001099736) -10 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr4-4665 chr4 84332182 84332392 + 11.3 0.000 Intergenic MER76|LTR|ERVL -33118 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr5-4762 chr5 53091367 53091577 + 11.3 0.000 non-coding (NR_073107, exon 29 of 29) non-coding (NR_073107, exon 29 of 29) 18285 NM_176806 4338 Hs.163645 NM_004531 ENSG00000164172 MOCS2 MCBPE|MOCO1|MOCODB|MPTS molybdenum cofactor synthesis 2 protein-coding chr12-8293 chr12 126657460 126657670 + 11.3 0.000 intron (NR_110035, intron 1 of 1) intron (NR_110035, intron 1 of 1) 32753 NR_110034 100996671 Hs.121392 NR_110034 ENSG00000256732 LOC100996671 - uncharacterized LOC100996671 ncRNA chr15-1250 chr15 77908410 77908620 + 11.3 0.000 Intergenic Intergenic 18331 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr22-1221 chr22 38768914 38769124 + 11.3 0.000 Intergenic Intergenic -13021 NM_015374 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr1-11748 chr1 18518070 18518280 + 11.3 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 37245 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr6-2183 chr6 35419576 35419786 + 11.3 0.000 intron (NM_001171820, intron 3 of 5) intron (NM_001171820, intron 3 of 5) -32680 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr4-2108 chr4 54085507 54085717 + 11.3 0.000 Intergenic Intergenic -14551 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chrX-927 chrX 23915213 23915423 + 11.3 0.000 intron (NM_001169574, intron 3 of 8) L2a|LINE|L2 7312 NM_152761 254158 Hs.351265 NM_152761 ENSG00000165182 CXorf58 - chromosome X open reading frame 58 protein-coding chr20-785 chr20 51360595 51360805 + 11.3 0.000 Intergenic Intergenic 92277 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr9-1884 chr9 111256847 111257057 + 11.3 0.000 Intergenic Intergenic 14262 NR_106989 102465800 NR_106989 ENSG00000274263 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA chr4-2991 chr4 119559106 119559316 + 11.3 0.000 intron (NM_033437, intron 7 of 20) intron (NM_033437, intron 7 of 20) 68526 NM_033430 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr3-2489 chr3 149548234 149548444 + 11.3 0.000 intron (NM_001348362, intron 6 of 9) intron (NM_001348362, intron 6 of 9) 73642 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr3-4563 chr3 157357987 157358197 + 11.3 0.000 intron (NM_024621, intron 9 of 13) intron (NM_024621, intron 9 of 13) -78758 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr12-4386 chr12 5574857 5575067 + 11.3 0.000 intron (NM_001278596, intron 24 of 25) intron (NM_001278596, intron 24 of 25) 80830 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr3-10982 chr3 178522998 178523208 + 11.3 0.000 Intergenic Intergenic -13333 NM_181361 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr8-2141 chr8 22848201 22848411 + 11.3 0.000 intron (NM_001363233, intron 3 of 6) intron (NM_001363233, intron 3 of 6) -29666 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr9-1844 chr9 136937355 136937565 + 11.3 0.000 Intergenic Intergenic 7278 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr2-1892 chr2 100818557 100818767 + 11.3 0.000 Intergenic CpG -1477 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr16-4265 chr16 24071959 24072169 + 11.3 0.000 intron (NM_002738, intron 5 of 16) L1MB5|LINE|L1 -131052 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr2-3123 chr2 167385402 167385612 + 11.3 0.000 Intergenic Intergenic 198135 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr9-5116 chr9 35895156 35895366 + 11.3 0.000 Intergenic AluSx|SINE|Alu -10941 NM_001039792 646962 Hs.208081 NM_001039792 ENSG00000196196 HRCT1 LGLL338|PRO537|UNQ338 histidine rich carboxyl terminus 1 protein-coding chr10-3357 chr10 15027859 15028069 + 11.3 0.000 intron (NR_144471, intron 3 of 7) HERV1_LTRa|LTR|ERV1 7461 NR_144469 105376432 Hs.723069 NR_144469 DCLRE1CP1 - DNA cross-link repair 1C pseudogene 1 pseudo chr18-2197 chr18 61682774 61682984 + 11.3 0.000 Intergenic Intergenic -65297 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr11-5829 chr11 8279514 8279724 + 11.3 0.000 Intergenic Intergenic -10832 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr1-4243 chr1 203447722 203447932 + 11.3 0.000 Intergenic MIR|SINE|MIR -27979 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr10-3468 chr10 60286903 60287113 + 11.3 0.000 intron (NM_001204403, intron 2 of 43) L1MEd|LINE|L1 102867 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr1-3161 chr1 83575279 83575489 + 11.3 0.000 TTS (NR_119375) TTS (NR_119375) 129330 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr11-5943 chr11 16583386 16583596 + 11.3 0.000 intron (NM_001367872, intron 3 of 16) L1MA4A|LINE|L1 -107103 NM_033326 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr4-2080 chr4 24680817 24681027 + 11.3 0.000 Intergenic Intergenic -96368 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr10-4369 chr10 35372362 35372572 + 11.3 0.000 intron (NM_001282852, intron 1 of 8) intron (NM_001282852, intron 1 of 8) 35593 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr10-2350 chr10 78331970 78332180 + 11.3 0.000 Intergenic Intergenic 64733 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr14-2650 chr14 69247945 69248155 + 11.3 0.000 Intergenic Intergenic -12108 NM_001168368 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr18-1635 chr18 53927212 53927422 + 11.3 0.000 Intergenic Intergenic 295095 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr3-1933 chr3 194265749 194265959 + 11.3 0.000 Intergenic Intergenic -15701 NR_125403 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chr9-3947 chr9 136247619 136247829 + 11.3 0.000 Intergenic L2a|LINE|L2 -1883 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr1-13436 chr1 3044349 3044559 + 11.3 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 22987 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr15-4694 chr15 66389983 66390193 + 11.3 0.000 intron (NM_002755, intron 1 of 10) intron (NM_002755, intron 1 of 10) 3215 NM_002755 5604 Hs.145442 NM_002755 ENSG00000169032 MAP2K1 CFC3|MAPKK1|MEK1|MKK1|PRKMK1 mitogen-activated protein kinase kinase 1 protein-coding chrX-1102 chrX 11557164 11557374 + 11.3 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) 108651 NR_109776 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr6-3274 chr6 154317741 154317951 + 11.3 0.000 intron (NM_001130699, intron 1 of 12) L1ME2|LINE|L1 12235 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr3-7446 chr3 126895900 126896110 + 11.3 0.000 intron (NM_032343, intron 5 of 7) Charlie16a|DNA|hAT-Charlie -92589 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr15-3494 chr15 97935532 97935742 + 11.3 0.000 Intergenic LTR33A_|LTR|ERVL -25066 NM_183376 91947 Hs.6093 NM_183376 ENSG00000140450 ARRDC4 - arrestin domain containing 4 protein-coding chr11-4148 chr11 46587093 46587303 + 11.3 0.000 intron (NM_001267782, intron 1 of 19) AluSx|SINE|Alu 246 NR_160027 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr3-2927 chr3 53591436 53591646 + 11.3 0.000 intron (NM_001128840, intron 3 of 47) AluSx3|SINE|Alu 96930 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr16-4068 chr16 1802863 1803073 + 11.3 0.000 Intergenic AluSx|SINE|Alu -8060 NR_027389 3483 Hs.839 NM_004970 ENSG00000099769 IGFALS ACLSD|ALS insulin like growth factor binding protein acid labile subunit protein-coding chr20-1873 chr20 42392770 42392980 + 11.3 0.000 intron (NM_133170, intron 9 of 31) MER39|LTR|ERV1 -292608 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chrX-2698 chrX 119729422 119729632 + 11.3 0.000 Intergenic MIR|SINE|MIR -29061 NM_001105576 347454 Hs.355223 NM_001105576 ENSG00000187808 SOWAHD ANKRD58 sosondowah ankyrin repeat domain family member D protein-coding chrX-672 chrX 9310812 9311022 + 11.3 0.000 Intergenic MIRb|SINE|MIR -152378 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr10-5735 chr10 101720879 101721089 + 11.3 0.000 Intergenic AluSz|SINE|Alu -25689 NM_001323541 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr3-1382 chr3 53845759 53845969 + 11.3 0.000 promoter-TSS (NM_018725) promoter-TSS (NM_018725) 555 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr1-3073 chr1 19430085 19430295 + 11.3 0.000 intron (NM_001206540, intron 1 of 9) intron (NM_001206540, intron 1 of 9) 54105 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr5-1693 chr5 83368472 83368682 + 11.3 0.000 Intergenic Intergenic -103097 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr6-1802 chr6 131015757 131015967 + 11.3 0.000 intron (NM_001135554, intron 1 of 14) intron (NM_001135554, intron 1 of 14) -2253 NM_001350309 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr7-3964 chr7 133703528 133703738 + 11.3 0.000 intron (NM_021807, intron 10 of 17) Tigger4|DNA|TcMar-Tigger 121255 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr9-4004 chr9 33959882 33960092 + 11.3 0.000 intron (NM_001370064, intron 9 of 27) AluJr|SINE|Alu -7133 NR_003685 100113379 NR_003685 ENSG00000238886 SNORD121A - small nucleolar RNA, C/D box 121A snoRNA chr5-1033 chr5 150780933 150781143 + 11.3 0.000 intron (NM_032947, intron 1 of 1) MIR|SINE|MIR 3092 NM_032947 85027 Hs.29444 NM_032947 ENSG00000256235 SMIM3 C5orf62|MST150|NID67 small integral membrane protein 3 protein-coding chr2-4653 chr2 190159573 190159783 + 11.3 0.000 intron (NM_001042520, intron 1 of 1) intron (NM_001042520, intron 1 of 1) 9432 NM_001042520 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding chr5-3168 chr5 72697103 72697313 + 11.3 0.000 Intergenic Intergenic -36539 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr4-1458 chr4 151641170 151641380 + 11.3 0.000 intron (NM_001109977, intron 9 of 13) intron (NM_001109977, intron 9 of 13) 119732 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr13-4244 chr13 96449365 96449575 + 11.3 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 22241 NR_039723 100616137 NR_039723 ENSG00000283487 MIR4501 - microRNA 4501 ncRNA chr10-1259 chr10 116849742 116849952 + 11.3 0.000 promoter-TSS (NM_001330164) promoter-TSS (NM_001330164) -125 NM_001330164 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding chr7-5560 chr7 46832368 46832578 + 11.3 0.000 Intergenic MER44D|DNA|TcMar-Tigger -135351 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr16-3883 chr16 73551814 73552024 + 11.3 0.000 Intergenic Intergenic 165114 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr10-2339 chr10 70518860 70519070 + 11.3 0.000 intron (NM_014431, intron 1 of 19) MIRc|SINE|MIR 40198 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr6-2304 chr6 107318203 107318413 + 11.3 0.000 intron (NM_020381, intron 2 of 7) intron (NM_020381, intron 2 of 7) 141256 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr2-9083 chr2 202748691 202748901 + 11.3 0.000 intron (NM_173511, intron 4 of 7) L1M2|LINE|L1 80438 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr3-5439 chr3 176692333 176692543 + 11.3 0.000 Intergenic Intergenic -56906 NR_109968 100505547 Hs.253350 NR_109968 LINC01208 - long intergenic non-protein coding RNA 1208 ncRNA chr10-1728 chr10 103589322 103589532 + 11.3 0.000 intron (NM_004210, intron 4 of 5) intron (NM_004210, intron 4 of 5) -71985 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr7-2365 chr7 18978269 18978479 + 11.3 0.000 intron (NM_001321868, intron 25 of 25) intron (NM_001321868, intron 25 of 25) 139262 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr5-5229 chr5 116478540 116478750 + 11.3 0.000 exon (NM_020796, exon 13 of 19) exon (NM_020796, exon 13 of 19) 31147 NR_109879 101927233 Hs.732850 NR_109879 ENSG00000248445 SEMA6A-AS1 CTB-118N6.3 SEMA6A antisense RNA 1 ncRNA chr10-3320 chr10 4142034 4142244 + 11.3 0.000 Intergenic L1MCc|LINE|L1 90413 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA chr7-3573 chr7 22401884 22402094 + 11.3 0.000 Intergenic AluSc|SINE|Alu -44835 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr16-3570 chr16 65645943 65646153 + 11.3 0.000 Intergenic L1ME2z|LINE|L1 -69748 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr2-8689 chr2 151260758 151260968 + 11.3 0.000 intron (NM_198557, intron 1 of 3) intron (NM_198557, intron 1 of 3) 1000 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr2-7013 chr2 148891709 148891919 + 11.3 0.000 intron (NM_004522, intron 1 of 25) AluSq2|SINE|Alu 16587 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr6-678 chr6 150865587 150865797 + 11.3 0.000 promoter-TSS (NM_001242769) promoter-TSS (NM_001242769) -10 NM_001350489 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr8-4361 chr8 101626864 101627074 + 11.3 0.000 intron (NM_024915, intron 9 of 15) intron (NM_024915, intron 9 of 15) 134530 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr18-3374 chr18 58889795 58890005 + 11.3 0.000 intron (NM_001353535, intron 2 of 6) AluSx|SINE|Alu 25023 NM_001353527 55205 Hs.529023 NM_018181 ENSG00000074657 ZNF532 - zinc finger protein 532 protein-coding chr6-2043 chr6 75205821 75206031 + 11.3 0.000 5' UTR (NM_004370, exon 1 of 66) 5' UTR (NM_004370, exon 1 of 66) 127 NM_080645 1303 Hs.101302 NM_004370 ENSG00000111799 COL12A1 BA209D8.1|BTHLM2|COL12A1L|DJ234P15.1|EDSMYP|UCMD2 collagen type XII alpha 1 chain protein-coding chr2-5589 chr2 175804361 175804571 + 11.3 0.000 Intergenic Intergenic 197801 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr7-6041 chr7 110204629 110204839 + 11.3 0.000 Intergenic L1MA2|LINE|L1 -244521 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr10-6032 chr10 126654658 126654868 + 11.3 0.000 intron (NM_001350922, intron 1 of 8) Tigger1|DNA|TcMar-Tigger 15747 NM_001350922 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr12-7085 chr12 43486932 43487142 + 11.3 0.000 intron (NM_025003, intron 7 of 38) L1PB3|LINE|L1 65166 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr22-2652 chr22 35679737 35679947 + 11.3 0.000 Intergenic THE1B|LTR|ERVL-MaLR 31396 NM_030641 80830 Hs.257352 NM_030641 ENSG00000221963 APOL6 APOL-VI|APOLVI apolipoprotein L6 protein-coding chr22-1873 chr22 41550513 41550723 + 11.3 0.000 Intergenic AluSg4|SINE|Alu -6012 NM_001282884 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding chr2-1330 chr2 99154994 99155204 + 11.3 0.000 promoter-TSS (NR_146054) promoter-TSS (NR_146054) 25 NR_037935 51601 Hs.719172 NM_015929 ENSG00000144182 LIPT1 LIPT1D lipoyltransferase 1 protein-coding chr1-4268 chr1 3076178 3076388 + 11.3 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 7080 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr2-9326 chr2 224910135 224910345 + 11.3 0.000 intron (NM_001290263, intron 3 of 55) intron (NM_001290263, intron 3 of 55) 36809 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chrX-1342 chrX 136250639 136250849 + 11.3 0.000 intron (NM_001173516, intron 1 of 18) intron (NM_001173516, intron 1 of 18) 656 NM_024597 79649 Hs.446275 NM_024597 ENSG00000129680 MAP7D3 MDP3 MAP7 domain containing 3 protein-coding chr3-5820 chr3 30612288 30612498 + 11.3 0.000 intron (NM_003242, intron 1 of 6) intron (NM_003242, intron 1 of 6) 5792 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr19-3891 chr19 38445851 38446061 + 11.3 0.000 intron (NM_001042723, intron 7 of 104) AluSz6|SINE|Alu 12256 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr11-2061 chr11 72989817 72990027 + 11.3 0.000 intron (NM_014824, intron 5 of 19) intron (NM_014824, intron 5 of 19) 152396 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr1-3102 chr1 35451108 35451318 + 11.3 0.000 intron (NM_024874, intron 13 of 20) intron (NM_024874, intron 13 of 20) -85136 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr5-5031 chr5 86647712 86647922 + 11.3 0.000 Intergenic Intergenic 27311 NR_145802 109623460 NR_037402 SNORD138 MIR3607|mir-3607 small nucleolar RNA, C/D box 138 snoRNA chr8-3979 chr8 52483977 52484187 + 11.3 0.000 Intergenic Intergenic -74203 NM_001352838 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr11-4582 chr11 129571393 129571603 + 11.3 0.000 Intergenic L2c|LINE|L2 45771 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr7-2539 chr7 73717048 73717258 + 11.3 0.000 intron (NM_001165903, intron 1 of 9) intron (NM_001165903, intron 1 of 9) 2516 NM_004603 6804 Hs.647024 NM_004603 ENSG00000106089 STX1A HPC-1|P35-1|STX1|SYN1A syntaxin 1A protein-coding chr12-2887 chr12 40739106 40739316 + 11.3 0.000 intron (NM_001256063, intron 1 of 15) L1ME3Cz|LINE|L1 46769 NM_001256063 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr4-2407 chr4 86307604 86307814 + 11.3 0.000 intron (NM_001363657, intron 2 of 13) intron (NM_001363657, intron 2 of 13) 46935 NM_001318067 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr4-3766 chr4 92162969 92163179 + 11.3 0.000 Intergenic L1PA17|LINE|L1 114228 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chrX-1098 chrX 10612310 10612520 + 11.3 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) 8170 NM_000381 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr18-2006 chr18 42266856 42267066 + 11.3 0.000 intron (NR_046454, intron 3 of 6) intron (NR_046454, intron 3 of 6) 80293 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr19-3482 chr19 36320255 36320465 + 11.3 0.000 non-coding (NR_038278, exon 6 of 6) non-coding (NR_038278, exon 6 of 6) 9017 NR_029389 100134317 Hs.466550 NR_029389 LOC100134317 - uncharacterized LOC100134317 ncRNA chr6-6792 chr6 4503892 4504102 + 11.3 0.000 Intergenic MER5A1|DNA|hAT-Charlie 15199 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr5-5341 chr5 130845721 130845931 + 11.3 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 319430 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr14-1266 chr14 52031947 52032157 + 11.3 0.000 intron (NM_007361, intron 9 of 21) intron (NM_007361, intron 9 of 21) 37007 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr3-1695 chr3 33482302 33482512 + 11.3 0.000 Intergenic MER65-int|LTR|ERV1 -42002 NM_001128161 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr3-6378 chr3 89015386 89015596 + 11.3 0.000 Intergenic FordPrefect_a|DNA|hAT-Tip100 -92130 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr10-5970 chr10 123649151 123649361 + 11.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -17099 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr5-5132 chr5 103976490 103976700 + 11.3 0.000 Intergenic L1MA4A|LINE|L1 -413806 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr4-3525 chr4 155787161 155787371 + 11.3 0.000 intron (NM_001291951, intron 5 of 14) intron (NM_001291951, intron 5 of 14) 28245 NM_001291952 2983 Hs.77890 NM_000857 ENSG00000061918 GUCY1B1 GC-S-beta-1|GC-SB3|GUC1B3|GUCB3|GUCSB3|GUCY1B3 guanylate cyclase 1 soluble subunit beta 1 protein-coding chr12-3147 chr12 46773814 46774024 + 11.3 0.000 intron (NM_018018, intron 14 of 16) intron (NM_018018, intron 14 of 16) 52078 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr3-4254 chr3 144179697 144179907 + 11.3 0.000 Intergenic Intergenic 206721 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chrX-814 chrX 77802519 77802729 + 11.3 0.000 Intergenic L1M4|LINE|L1 -16408 NM_138270 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr3-5326 chr3 128784322 128784532 + 11.3 0.000 intron (NM_004637, intron 1 of 5) L2|LINE|L2 58291 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr15-1011 chr15 77838829 77839039 + 11.3 0.000 Intergenic Intergenic -18034 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr20-1693 chr20 35447168 35447378 + 11.3 0.000 intron (NM_001319138, intron 1 of 3) L1PA5|LINE|L1 6824 NR_031620 100302125 NR_031620 ENSG00000221763 MIR1289-1 MIRN1289-1|hsa-mir-1289-1 microRNA 1289-1 ncRNA chr8-4726 chr8 141760284 141760494 + 11.3 0.000 Intergenic Intergenic 25924 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr6-4990 chr6 108002260 108002470 + 11.3 0.000 Intergenic Intergenic -44157 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr4-3805 chr4 111131665 111131875 + 11.3 0.000 Intergenic L1MA1|LINE|L1 -271123 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr7-4469 chr7 135315843 135316053 + 11.3 0.000 Intergenic Intergenic 83969 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr5-4521 chr5 14511366 14511576 + 11.3 0.000 Intergenic L1MD|LINE|L1 47488 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr2-9387 chr2 230892339 230892549 + 11.3 0.000 intron (NR_038238, intron 1 of 3) MLT1G1|LTR|ERVL-MaLR 5898 NR_038238 151484 Hs.559309 NR_038238 ENSG00000232520 LOC151484 - uncharacterized LOC151484 ncRNA chr1-10633 chr1 180225254 180225464 + 11.3 0.000 Intergenic Intergenic -4905 NM_033343 89884 Hs.658487 NM_033343 ENSG00000121454 LHX4 CPHD4 LIM homeobox 4 protein-coding chr8-7368 chr8 137340844 137341054 + 11.3 0.000 Intergenic Intergenic 72639 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr3-6435 chr3 102567712 102567922 + 11.3 0.000 Intergenic L1PA7|LINE|L1 132802 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr15-2111 chr15 68749773 68749983 + 11.3 0.000 Intergenic Intergenic 52047 NR_036197 100422971 NR_036197 ENSG00000265195 MIR4312 - microRNA 4312 ncRNA chr11-4506 chr11 116413414 116413624 + 11.3 0.000 Intergenic Intergenic -225903 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr11-5557 chr11 100543057 100543267 + 11.3 0.000 Intergenic Intergenic -144126 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr7-5369 chr7 31292333 31292543 + 11.3 0.000 Intergenic L2b|LINE|L2 48288 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr11-2739 chr11 27839377 27839587 + 11.3 0.000 Intergenic Intergenic -117452 NM_170731 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr1-4183 chr1 39897127 39897337 + 11.3 0.000 3' UTR (NM_001033081, exon 2 of 2) 3' UTR (NM_001033081, exon 2 of 2) 4685 NM_001033081 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 MYCL proto-oncogene, bHLH transcription factor protein-coding chr7-1888 chr7 130794535 130794745 + 11.3 0.000 Intergenic MER51B|LTR|ERV1 -60607 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr9-2977 chr9 27413088 27413298 + 11.3 0.000 intron (NM_024761, intron 2 of 3) LTR78|LTR|ERV1 -111121 NM_020124 56832 Hs.591083 NM_020124 ENSG00000147896 IFNK IFNT1|INFE1 interferon kappa protein-coding chrX-2617 chrX 107849886 107850096 + 11.3 0.000 intron (NM_052817, intron 2 of 9) intron (NM_052817, intron 2 of 9) 24125 NM_012216 11043 Hs.12256 NM_012216 ENSG00000080561 MID2 FXY2|MRX101|RNF60|TRIM1 midline 2 protein-coding chr2-10154 chr2 78922708 78922918 + 11.3 0.000 Intergenic LTR16A|LTR|ERVL -102889 NM_198448 130120 Hs.447084 NM_198448 ENSG00000143954 REG3G LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429 regenerating family member 3 gamma protein-coding chr22-1765 chr22 27224503 27224713 + 11.3 0.000 promoter-TSS (NM_001350812) promoter-TSS (NM_001350812) 71 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr10-5418 chr10 77137414 77137624 + 11.3 0.000 intron (NM_001271519, intron 5 of 28) intron (NM_001271519, intron 5 of 28) -3312 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr5-4069 chr5 57122279 57122489 + 11.3 0.000 Intergenic AluSz|SINE|Alu -51564 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr8-1234 chr8 120816704 120816914 + 11.3 0.000 Intergenic Intergenic -4763 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr1-4991 chr1 62131201 62131411 + 11.3 0.000 intron (NM_001350145, intron 41 of 43) intron (NM_001350145, intron 41 of 43) -52450 NR_036059 100422946 NR_036059 ENSG00000283690 MIR3116-2 - microRNA 3116-2 ncRNA chrX-2778 chrX 131201789 131201999 + 11.3 0.000 Intergenic L2a|LINE|L2 87167 NM_001170963 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr8-4362 chr8 101761022 101761232 + 11.3 0.000 intron (NM_001040625, intron 4 of 6) intron (NM_001040625, intron 4 of 6) 29842 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr11-5041 chr11 93055022 93055232 + 11.3 0.000 Intergenic Intergenic 85504 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr6-4508 chr6 37553625 37553835 + 11.3 0.000 Intergenic Intergenic 1692 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr7-8066 chr7 23356978 23357188 + 11.3 0.000 intron (NM_006547, intron 5 of 14) intron (NM_006547, intron 5 of 14) -39363 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA chr2-8463 chr2 122754393 122754603 + 11.3 0.000 Intergenic Intergenic 318983 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr14-4631 chr14 53691913 53692123 + 11.3 0.000 Intergenic Intergenic 256466 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr15-1176 chr15 24954944 24955154 + 11.3 0.000 promoter-TSS (NM_001349465) promoter-TSS (NM_001349465) 57 NM_001349464 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr2-3031 chr2 69548055 69548265 + 11.3 0.000 intron (NM_014911, intron 3 of 21) L1MB7|LINE|L1 -27989 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr9-2673 chr9 41565745 41565955 + 11.3 0.000 Intergenic MER77|LTR|ERVL -81824 NR_103714 100289124 Hs.567050 NM_001024608 FAM27E2 FAM27E1 family with sequence similarity 27 member E2 ncRNA chr8-3359 chr8 46583253 46583463 + 11.3 0.000 intron (NR_146077, intron 7 of 8) AluY|SINE|Alu 34285 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr13-1588 chr13 39942754 39942964 + 11.3 0.000 Intergenic Intergenic -238950 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr8-4206 chr8 85225181 85225391 + 11.3 0.000 Intergenic MamGypLTR1b|LTR|Gypsy -4864 NM_001293320 401466 Hs.443072 NM_001099670 ENSG00000176731 RBIS C8orf59 ribosomal biogenesis factor protein-coding chr3-3426 chr3 122382998 122383208 + 11.3 0.000 intron (NM_001017928, intron 1 of 4) intron (NM_001017928, intron 1 of 4) 128 NM_001017928 131076 Hs.220594 NM_001017928 ENSG00000160124 CCDC58 - coiled-coil domain containing 58 protein-coding chr19-3336 chr19 7380615 7380825 + 11.3 0.000 intron (NM_001367823, intron 7 of 28) intron (NM_001367823, intron 7 of 28) -14425 NM_015318 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr17-2863 chr17 31249062 31249272 + 11.3 0.000 intron (NM_000267, intron 30 of 56) intron (NM_000267, intron 30 of 56) 48072 NM_002544 4974 Hs.113874 NM_002544 ENSG00000126861 OMG OMGP oligodendrocyte myelin glycoprotein protein-coding chr3-3101 chr3 140922759 140922969 + 11.3 0.000 Intergenic Intergenic -18972 NM_001104647 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr3-4155 chr3 123741320 123741530 + 11.3 0.000 intron (NM_001321309, intron 4 of 32) intron (NM_001321309, intron 4 of 32) 51781 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr1-6105 chr1 150344315 150344525 + 11.3 0.000 non-coding (NR_146766, exon 12 of 16) non-coding (NR_146766, exon 12 of 16) -19691 NM_001297674 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding chr2-5444 chr2 121295661 121295871 + 11.3 0.000 Intergenic MER52A|LTR|ERV1 -10564 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr10-6038 chr10 126916059 126916269 + 11.3 0.000 intron (NM_001290223, intron 1 of 51) MIRc|SINE|MIR 10755 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr2-4180 chr2 189298690 189298900 + 11.3 0.000 Intergenic LTR78B|LTR|ERV1 -119034 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr6-2770 chr6 131173884 131174094 + 11.3 0.000 intron (NM_016377, intron 5 of 7) intron (NM_016377, intron 5 of 7) 38522 NM_016377 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr2-3207 chr2 219253567 219253777 + 11.3 0.000 intron (NM_001355221, intron 1 of 3) CpG 246 NM_006000 7277 Hs.75318 NM_006000 ENSG00000127824 TUBA4A ALS22|H2-ALPHA|TUBA1 tubulin alpha 4a protein-coding chr3-5312 chr3 127391820 127392030 + 11.3 0.000 Intergenic Intergenic -1255 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr11-9287 chr11 45070533 45070743 + 11.3 0.000 Intergenic Intergenic -23375 NM_001359633 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr15-1085 chr15 48312751 48312961 + 11.3 0.000 Intergenic AluJb|SINE|Alu -18239 NM_001330286 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr5-4534 chr5 15924887 15925097 + 11.3 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -10190 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr12-4109 chr12 60948354 60948564 + 11.3 0.000 Intergenic Intergenic 1244380 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr8-6819 chr8 97181834 97182044 + 11.3 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) 95989 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr9-2458 chr9 23943545 23943755 + 11.3 0.000 Intergenic MER61-int|LTR|ERV1 -93049 NM_001351460 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding chr11-3808 chr11 66113365 66113575 + 11.3 0.000 intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 43198 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr12-3053 chr12 5138728 5138938 + 11.3 0.000 Intergenic Intergenic 94954 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr3-3166 chr3 176277155 176277365 + 11.3 0.000 Intergenic L1ME3A|LINE|L1 32709 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA chr7-5623 chr7 53755833 53756043 + 11.3 0.000 intron (NR_038371, intron 4 of 5) intron (NR_038371, intron 4 of 5) 55993 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr5-2519 chr5 158514636 158514846 + 11.3 0.000 Intergenic Intergenic -104968 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr1-6335 chr1 4739090 4739300 + 11.3 0.000 intron (NM_018836, intron 2 of 5) intron (NM_018836, intron 2 of 5) 84586 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr14-1372 chr14 21256815 21257025 + 11.3 0.000 intron (NM_001077442, intron 1 of 7) AluJb|SINE|Alu 12559 NM_001077442 3183 Hs.508848 NM_004500 ENSG00000092199 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding chr2-5007 chr2 222467584 222467794 + 11.3 0.000 intron (NM_001320833, intron 2 of 5) intron (NM_001320833, intron 2 of 5) 43146 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr3-7398 chr3 95690196 95690406 + 11.3 0.000 Intergenic Intergenic -7108 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr10-3737 chr10 118285397 118285607 + 11.3 0.000 Intergenic THE1D|LTR|ERVL-MaLR 56822 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr11-5638 chr11 121634906 121635116 + 11.3 0.000 Intergenic MamRep605|LTR?|LTR? 182697 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr11-6097 chr11 34532049 34532259 + 11.3 0.000 Intergenic MIRb|SINE|MIR -18360 NM_001243080 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chrX-475 chrX 41453063 41453273 + 11.3 0.000 intron (NM_022567, intron 1 of 1) intron (NM_022567, intron 1 of 1) 5708 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr11-5919 chr11 14334993 14335203 + 11.3 0.000 intron (NM_001177314, intron 1 of 5) L2|LINE|L2 23387 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr2-8886 chr2 177593593 177593803 + 11.3 0.000 Intergenic Intergenic 25044 NM_152275 92104 Hs.128384 NM_152275 ENSG00000197557 TTC30A IFT70A|TTC30B tetratricopeptide repeat domain 30A protein-coding chr2-9273 chr2 221489439 221489649 + 11.3 0.000 intron (NM_001363748, intron 4 of 17) L2a|LINE|L2 82760 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr6-2922 chr6 21033552 21033762 + 11.3 0.000 intron (NM_017774, intron 11 of 15) intron (NM_017774, intron 11 of 15) 478235 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr2-1534 chr2 161238013 161238223 + 11.3 0.000 intron (NR_110593, intron 3 of 3) CpG -6621 NR_110164 100996579 Hs.660929 NR_110163 ENSG00000227403 LINC01806 - long intergenic non-protein coding RNA 1806 ncRNA chr2-4233 chr2 219079476 219079686 + 11.3 0.000 intron (NM_024782, intron 5 of 7) intron (NM_024782, intron 5 of 7) -18660 NM_002181 3549 Hs.654504 NM_002181 ENSG00000163501 IHH BDA1|HHG2 Indian hedgehog signaling molecule protein-coding chrX-1592 chrX 85914148 85914358 + 11.3 0.000 intron (NM_001320959, intron 8 of 14) L1PA13|LINE|L1 -10546 NR_029848 494323 NR_029848 ENSG00000199051 MIR361 MIRN361|hsa-mir-361|mir-361 microRNA 361 ncRNA chr1-2151 chr1 13785061 13785271 + 11.3 0.000 intron (NM_012231, intron 8 of 9) intron (NM_012231, intron 8 of 9) 35751 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr5-3256 chr5 99886262 99886472 + 11.3 0.000 Intergenic L1MD3|LINE|L1 352377 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr1-3205 chr1 156403057 156403267 + 11.3 0.000 Intergenic Intergenic 17267 NR_029691 407046 NR_029691 ENSG00000207933 MIR9-1 MIRN9-1|hsa-mir-9-1|miRNA9-1|mir-9-1 microRNA 9-1 ncRNA chr11-3471 chr11 76073841 76074051 + 11.3 0.000 intron (NM_003369, intron 13 of 14) Charlie1a|DNA|hAT-Charlie 132556 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr20-4535 chr20 63915698 63915908 + 11.3 0.000 intron (NM_025219, intron 1 of 4) MER5C|DNA|hAT-Charlie -3646 NR_030637 100126329 NR_030637 ENSG00000283206 MIR941-1 MIRN941-1|mir-941-1 microRNA 941-1 ncRNA chrX-1735 chrX 40272373 40272583 + 11.3 0.000 intron (NR_110386, intron 1 of 2) intron (NR_110386, intron 1 of 2) 9561 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr20-2203 chr20 55894682 55894892 + 11.3 0.000 Intergenic Intergenic 110732 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr17-1875 chr17 43389320 43389530 + 11.3 0.000 promoter-TSS (NR_027412) promoter-TSS (NR_027412) -527 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chr5-7273 chr5 13662594 13662804 + 11.3 0.000 Intergenic Intergenic 281781 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr4-2845 chr4 54494888 54495098 + 11.3 0.000 Intergenic Intergenic 112138 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr10-6864 chr10 29238814 29239024 + 11.3 0.000 Intergenic Intergenic -50151 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr19-3928 chr19 47377857 47378067 + 11.3 0.000 intron (NM_014681, intron 13 of 16) intron (NM_014681, intron 13 of 16) 28647 NM_014681 9704 Hs.151706 NM_014681 ENSG00000134815 DHX34 DDX34|HRH1 DExH-box helicase 34 protein-coding chr8-6599 chr8 73346542 73346752 + 11.3 0.000 intron (NR_125388, intron 1 of 5) L1MB5|LINE|L1 9814 NR_125388 101926926 Hs.640090 NR_125388 ENSG00000250295 RDH10-AS1 - RDH10 antisense RNA 1 ncRNA chr1-6522 chr1 26749577 26749787 + 11.3 0.000 intron (NM_139135, intron 4 of 19) intron (NM_139135, intron 4 of 19) -38281 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr12-7706 chr12 90813347 90813557 + 11.3 0.000 Intergenic Intergenic -104571 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr10-4918 chr10 22454579 22454789 + 11.3 0.000 Intergenic LTR108d_Mam|LTR|ERVL -16755 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr17-3124 chr17 30788758 30788968 + 11.3 0.000 intron (NR_144394, intron 8 of 8) AluSg|SINE|Alu 35829 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr18-2069 chr18 48227330 48227540 + 11.3 0.000 intron (NM_001371285, intron 1 of 5) intron (NM_001371285, intron 1 of 5) -24866 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr1-4696 chr1 234852170 234852380 + 11.3 0.000 Intergenic LTR16A2|LTR|ERVL -92219 NR_148962 100130249 Hs.617350 NR_148962 ENSG00000279261 PP2672 - uncharacterized LOC100130249 ncRNA chr2-6081 chr2 165371968 165372178 + 11.3 0.000 intron (NM_001040143, intron 21 of 27) L3b|LINE|CR1 78018 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr15-2854 chr15 41088859 41089069 + 11.3 0.000 intron (NM_017553, intron 5 of 35) AluSx1|SINE|Alu 27282 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr6-1634 chr6 107965833 107966043 + 11.3 0.000 Intergenic Intergenic -7730 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr5-4842 chr5 62204460 62204670 + 11.3 0.000 Intergenic Intergenic -101597 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr1-10665 chr1 183872491 183872701 + 11.3 0.000 intron (NM_001297669, intron 5 of 18) intron (NM_001297669, intron 5 of 18) 67476 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr2-6649 chr2 4638693 4638903 + 11.3 0.000 intron (NR_034134, intron 3 of 4) MIRb|SINE|MIR 17424 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr9-2600 chr9 4489621 4489831 + 11.3 0.000 promoter-TSS (NM_004170) promoter-TSS (NM_004170) -742 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr10-1548 chr10 100971476 100971686 + 11.3 0.000 promoter-TSS (NM_001203244) promoter-TSS (NM_001203244) -948 NM_017893 57715 Hs.591923 NM_017893 ENSG00000095539 SEMA4G - semaphorin 4G protein-coding chr2-8189 chr2 88164586 88164796 + 11.3 0.000 Intergenic Intergenic -5604 NM_001244678 55258 Hs.739080 NM_018271 ENSG00000144115 THNSL2 SOFAT|THS2|TSH2 threonine synthase like 2 protein-coding chr5-1756 chr5 230634 230844 + 11.3 0.000 intron (NM_001294332, intron 5 of 13) intron (NM_001294332, intron 5 of 13) 12419 NM_004168 6389 Hs.440475 NM_004168 ENSG00000073578 SDHA CMD1GG|FP|PGL5|SDH1|SDH2|SDHF succinate dehydrogenase complex flavoprotein subunit A protein-coding chr16-3603 chr16 79233428 79233638 + 11.3 0.000 Intergenic Intergenic 367204 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr6-4341 chr6 17394197 17394407 + 11.3 0.000 intron (NM_006366, intron 1 of 12) intron (NM_006366, intron 1 of 12) 707 NM_006366 10486 Hs.132902 NM_006366 ENSG00000112186 CAP2 - cyclase associated actin cytoskeleton regulatory protein 2 protein-coding chr2-4846 chr2 82926356 82926566 + 11.3 0.000 Intergenic Intergenic 69658 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr3-9715 chr3 66657458 66657668 + 11.3 0.000 Intergenic Intergenic 80773 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr7-4435 chr7 116227770 116227980 + 11.3 0.000 intron (NM_152829, intron 1 of 6) intron (NM_152829, intron 1 of 6) 4922 NM_152829 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr17-2342 chr17 62096091 62096301 + 11.3 0.000 Intergenic Intergenic -30918 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr8-1820 chr8 124092690 124092900 + 11.3 0.000 intron (NM_001039112, intron 34 of 40) MSTA|LTR|ERVL-MaLR -52013 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr17-5307 chr17 27481479 27481689 + 11.3 0.000 intron (NM_014238, intron 1 of 20) intron (NM_014238, intron 1 of 20) 9620 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr6-1693 chr6 16761639 16761849 + 11.3 0.000 promoter-TSS (NM_001128164) promoter-TSS (NM_001128164) -254 NM_001128164 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr11-6790 chr11 88735553 88735763 + 11.3 0.000 intron (NM_001143831, intron 2 of 8) intron (NM_001143831, intron 2 of 8) 231082 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr17-4873 chr17 66340799 66341009 + 11.3 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 38291 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr10-5671 chr10 98586188 98586398 + 11.3 0.000 intron (NM_021828, intron 9 of 11) intron (NM_021828, intron 9 of 11) -139330 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr12-1594 chr12 13154110 13154320 + 11.3 0.000 Intergenic Intergenic -42511 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr22-1831 chr22 37122061 37122271 + 11.3 0.000 Intergenic Intergenic -12453 NM_001289000 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr12-2007 chr12 19440554 19440764 + 11.3 0.000 promoter-TSS (NM_001267043) promoter-TSS (NM_001267043) 60 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr2-6092 chr2 189172279 189172489 + 11.3 0.000 intron (NM_000393, intron 1 of 53) intron (NM_000393, intron 1 of 53) 7377 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr13-2184 chr13 19400992 19401202 + 11.3 0.000 Intergenic Intergenic 37378 NM_001271850 93492 Hs.377488 NM_130785 ENSG00000132958 TPTE2 TPIP transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 protein-coding chr3-2439 chr3 36701104 36701314 + 11.3 0.000 Intergenic Intergenic 38652 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr16-4221 chr16 14007627 14007837 + 11.3 0.000 Intergenic L1MB7|LINE|L1 8286 NR_110909 101927311 NR_110909 ENSG00000262097 LINC02185 - long intergenic non-protein coding RNA 2185 ncRNA chr5-2077 chr5 154811922 154812132 + 11.3 0.000 intron (NM_001367714, intron 19 of 19) intron (NM_001367714, intron 19 of 19) -17431 NR_039667 100616306 NR_039667 ENSG00000263361 MIR378H - microRNA 378h ncRNA chr3-2656 chr3 25039018 25039228 + 11.3 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 209800 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr19-2093 chr19 49818794 49819004 + 11.3 0.000 intron (NM_030973, intron 2 of 17) MSR1|Satellite|Satellite 620 NM_030973 81857 Hs.656639 NM_030973 ENSG00000104973 MED25 ACID1|ARC92|BVSYS|CMT2B2|P78|PTOV2|TCBAP0758 mediator complex subunit 25 protein-coding chr8-3220 chr8 132663185 132663395 + 11.3 0.000 intron (NR_135907, intron 1 of 10) intron (NR_135907, intron 1 of 10) 12255 NR_135912 23639 Hs.591865 NM_012472 ENSG00000129295 LRRC6 CILD19|LRTP|TSLRP leucine rich repeat containing 6 protein-coding chr12-3810 chr12 67592734 67592944 + 11.3 0.000 Intergenic MER63B|DNA|hAT-Blackjack -55906 NM_006482 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr8-2339 chr8 20105991 20106201 + 11.3 0.000 Intergenic Intergenic 77040 NM_003053 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr18-1837 chr18 22813644 22813854 + 11.3 0.000 Intergenic Intergenic -26912 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr3-4991 chr3 18227926 18228136 + 11.3 0.000 intron (NR_161333, intron 4 of 4) L2a|LINE|L2 197308 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr7-8144 chr7 28448359 28448569 + 11.3 0.000 intron (NM_004904, intron 1 of 10) intron (NM_004904, intron 1 of 10) 12849 NM_004904 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr5-2175 chr5 128551485 128551695 + 11.3 0.000 Intergenic L1PA5|LINE|L1 -13345 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr9-5277 chr9 82475713 82475923 + 11.3 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 487046 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr13-3718 chr13 39216790 39217000 + 11.3 0.000 Intergenic Intergenic 178439 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr16-1280 chr16 68128884 68129094 + 11.3 0.000 intron (NM_004555, intron 3 of 10) AluJr|SINE|Alu 43619 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr18-647 chr18 36697978 36698188 + 11.3 0.000 intron (NM_001281740, intron 17 of 28) intron (NM_001281740, intron 17 of 28) -34665 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr2-10988 chr2 99474355 99474565 + 11.3 0.000 intron (NR_135652, intron 1 of 21) intron (NR_135652, intron 1 of 21) 15557 NM_001321455 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr19-2485 chr19 4986496 4986706 + 11.3 0.000 intron (NM_001370094, intron 1 of 10) intron (NM_001370094, intron 1 of 10) 17488 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr7-5582 chr7 47897032 47897242 + 11.3 0.000 intron (NM_138295, intron 14 of 56) Charlie10|DNA|hAT-Charlie 51354 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr5-5646 chr5 157237712 157237922 + 11.3 0.000 intron (NM_005546, intron 8 of 16) MIRb|SINE|MIR -28306 NM_001037333 26999 Hs.519702 NM_014376 ENSG00000055163 CYFIP2 EIEE65|PIR121 cytoplasmic FMR1 interacting protein 2 protein-coding chr12-3638 chr12 95574754 95574964 + 11.3 0.000 Intergenic Intergenic -23383 NM_032147 84101 Hs.646421 NM_032147 ENSG00000136014 USP44 - ubiquitin specific peptidase 44 protein-coding chr22-1588 chr22 48701468 48701678 + 11.3 0.000 intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) -78722 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr10-3184 chr10 88965242 88965452 + 11.3 0.000 intron (NM_001320855, intron 1 of 8) intron (NM_001320855, intron 1 of 8) -12574 NM_001613 59 Hs.500483 NM_001613 ENSG00000107796 ACTA2 ACTSA actin alpha 2, smooth muscle protein-coding chr1-5132 chr1 154810065 154810275 + 11.3 0.000 intron (NM_170782, intron 2 of 7) intron (NM_170782, intron 2 of 7) 49706 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr18-1870 chr18 25903667 25903877 + 11.3 0.000 Intergenic L1MB2|LINE|L1 186841 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr3-6218 chr3 64716308 64716518 + 11.3 0.000 intron (NR_038264, intron 1 of 5) intron (NR_038264, intron 1 of 5) -28413 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr5-5219 chr5 115507684 115507894 + 11.3 0.000 Intergenic Intergenic 36986 NM_020177 56929 Hs.47367 NM_020177 ENSG00000145780 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog C protein-coding chr2-1859 chr2 240791922 240792132 + 11.3 0.000 intron (NM_004321, intron 2 of 46) (CCCCA)n|Simple_repeat|Simple_repeat 28192 NM_001320705 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr1-10058 chr1 92319413 92319623 + 11.3 0.000 intron (NM_024813, intron 6 of 12) Alu|SINE|Alu 20459 NM_024813 79871 Hs.444421 NM_024813 ENSG00000122484 RPAP2 C1orf82|Rtr1 RNA polymerase II associated protein 2 protein-coding chr16-2438 chr16 82160518 82160728 + 11.3 0.000 intron (NM_005792, intron 2 of 4) LTR40a|LTR|ERVL 9601 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr10-2303 chr10 32390657 32390867 + 11.3 0.000 Intergenic Intergenic -11993 NM_001282391 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr17-1798 chr17 81333386 81333596 + 11.3 0.000 Intergenic Intergenic -24243 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr2-9171 chr2 213410880 213411090 + 11.3 0.000 intron (NR_047660, intron 8 of 14) Harlequin-int|LTR|ERV1 126521 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr5-3298 chr5 121029906 121030116 + 11.3 0.000 Intergenic MER1A|DNA|hAT-Charlie -292539 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr2-2825 chr2 85814219 85814429 + 11.3 0.000 promoter-TSS (NR_038888) promoter-TSS (NR_038888) -806 NR_038888 284950 Hs.570227 NR_038888 LOC284950 - uncharacterized LOC284950 ncRNA chr3-4839 chr3 145639869 145640079 + 11.3 0.000 Intergenic LTR16A2|LTR|ERVL 429211 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr4-2173 chr4 101155414 101155624 + 11.3 0.000 intron (NM_001130691, intron 2 of 12) intron (NM_001130691, intron 2 of 12) 85353 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr12-1885 chr12 57118813 57119023 + 11.3 0.000 Intergenic Intergenic -7556 NR_033659 6778 Hs.524518 NM_003153 ENSG00000166888 STAT6 D12S1644|IL-4-STAT|STAT6B|STAT6C signal transducer and activator of transcription 6 protein-coding chr3-2534 chr3 47035553 47035763 + 11.3 0.000 intron (NR_146158, intron 19 of 21) intron (NR_146158, intron 19 of 21) 24116 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr1-8856 chr1 3518668 3518878 + 11.3 0.000 intron (NM_001409, intron 5 of 36) intron (NM_001409, intron 5 of 36) 42017 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr5-1943 chr5 10367592 10367802 + 11.3 0.000 intron (NM_001270661, intron 1 of 22) intron (NM_001270661, intron 1 of 22) 14002 NM_005885 10299 Hs.432862 NM_005885 ENSG00000145495 MARCH6 DOA10|MARCH-VI|RNF176|TEB4 membrane associated ring-CH-type finger 6 protein-coding chr4-1147 chr4 70736011 70736221 + 11.3 0.000 intron (NM_001345840, intron 1 of 13) AluJb|SINE|Alu 1706 NM_001345840 22902 Hs.740904 NM_014961 ENSG00000018189 RUFY3 RIPX|SINGAR1|ZFYVE30 RUN and FYVE domain containing 3 protein-coding chr22-2596 chr22 30532001 30532211 + 11.3 0.000 intron (NM_001193336, intron 5 of 11) intron (NM_001193336, intron 5 of 11) 10548 NM_001353441 730005 Hs.505605 NM_001193336 ENSG00000214491 SEC14L6 - SEC14 like lipid binding 6 protein-coding chr4-3963 chr4 183149887 183150097 + 11.3 0.000 intron (NM_024949, intron 1 of 22) intron (NM_024949, intron 1 of 22) 50735 NM_024949 80014 Hs.333179 NM_024949 ENSG00000151718 WWC2 BOMB WW and C2 domain containing 2 protein-coding chr11-2217 chr11 64659629 64659839 + 11.3 0.000 intron (NM_015080, intron 11 of 22) MIRc|SINE|MIR -16189 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr18-1330 chr18 76148076 76148286 + 11.3 0.000 Intergenic Intergenic 25183 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA chr2-1713 chr2 203684051 203684261 + 11.3 0.000 Intergenic Intergenic -22319 NM_001243078 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr2-4509 chr2 25618819 25619029 + 11.3 0.000 intron (NM_033147, intron 4 of 19) intron (NM_033147, intron 4 of 19) 31298 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr3-4285 chr3 156091790 156092000 + 11.3 0.000 Intergenic Intergenic -28653 NM_001308217 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr4-5231 chr4 168826069 168826279 + 11.3 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -5921 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr17-5580 chr17 47135503 47135713 + 11.3 0.000 intron (NM_001256, intron 14 of 18) intron (NM_001256, intron 14 of 18) 53687 NR_148340 996 Hs.463295 NM_001256 ENSG00000004897 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding chr7-2354 chr7 2509509 2509719 + 11.3 0.000 Intergenic Intergenic -2915 NM_001166355 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr10-5147 chr10 52215801 52216011 + 11.3 0.000 intron (NM_001098512, intron 9 of 17) intron (NM_001098512, intron 9 of 17) 98222 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr13-2697 chr13 90883310 90883520 + 11.3 0.000 Intergenic Intergenic 43182 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr7-3912 chr7 123131749 123131959 + 11.3 0.000 intron (NM_022444, intron 8 of 14) intron (NM_022444, intron 8 of 14) 68115 NM_022444 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr2-7980 chr2 65199935 65200145 + 11.3 0.000 Intergenic L1M1|LINE|L1 -27655 NM_005722 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr9-5869 chr9 131063618 131063828 + 11.3 0.000 intron (NM_006059, intron 13 of 27) intron (NM_006059, intron 13 of 27) -32753 NR_033701 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr1-3184 chr1 109570544 109570754 + 11.3 0.000 intron (NM_006496, intron 1 of 8) L2a|LINE|L2 22034 NM_006496 2773 Hs.73799 NM_006496 ENSG00000065135 GNAI3 87U6|ARCND1 G protein subunit alpha i3 protein-coding chr1-10056 chr1 92074171 92074381 + 11.3 0.000 TTS (NM_001287737) TTS (NM_001287737) 1196 NM_001287737 646817 NM_001287737 ENSG00000230667 SETSIP SETP18 SET like protein protein-coding chr3-1064 chr3 49906842 49907052 + 11.3 0.000 Intergenic Intergenic -3074 NR_134919 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chr17-1783 chr17 63366358 63366568 + 11.3 0.000 intron (NM_025185, intron 13 of 25) intron (NM_025185, intron 13 of 25) 73804 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr8-1564 chr8 122988672 122988882 + 11.3 0.000 Intergenic Intergenic 36995 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr19-2439 chr19 47383638 47383848 + 11.3 0.000 Intergenic L1M5|LINE|L1 34428 NM_014681 9704 Hs.151706 NM_014681 ENSG00000134815 DHX34 DDX34|HRH1 DExH-box helicase 34 protein-coding chr6-2933 chr6 24994927 24995137 + 11.3 0.000 intron (NM_001286446, intron 1 of 13) intron (NM_001286446, intron 1 of 13) 47256 NM_001286446 9750 Hs.559459 NM_014722 ENSG00000111913 RIPOR2 C6orf32|DFNB104|DIFF40|DIFF48|FAM65B|MYONAP|PL48 RHO family interacting cell polarization regulator 2 protein-coding chr2-6918 chr2 106573915 106574125 + 11.3 0.000 Intergenic Intergenic 86656 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr8-2214 chr8 18234477 18234687 + 11.3 0.000 Intergenic LTR88b|LTR|Gypsy? 12914 NM_001160174 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr11-9247 chr11 42424541 42424751 + 11.3 0.000 Intergenic Intergenic -170956 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr5-5518 chr5 143672264 143672474 + 11.3 0.000 Intergenic Intergenic -7491 NR_049829 100846991 NR_049829 ENSG00000266478 MIR5197 - microRNA 5197 ncRNA chr3-6907 chr3 156684456 156684666 + 11.3 0.000 intron (NM_015508, intron 2 of 5) AluSp|SINE|Alu 7897 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr4-1153 chr4 83267513 83267723 + 11.3 0.000 exon (NM_001358921, exon 6 of 7) exon (NM_001358921, exon 6 of 7) 17177 NM_001358921 27235 Hs.144304 NM_015697 ENSG00000173085 COQ2 CL640|COQ10D1|MSA1|PHB:PPT coenzyme Q2, polyprenyltransferase protein-coding chr15-1985 chr15 41978587 41978797 + 11.3 0.000 intron (NR_120334, intron 2 of 3) intron (NR_120334, intron 2 of 3) 5929 NR_120334 101928388 Hs.738043 NR_120334 ENSG00000246740 PLA2G4E-AS1 - PLA2G4E antisense RNA 1 ncRNA chr3-6746 chr3 139837454 139837664 + 11.3 0.000 Intergenic Intergenic -97626 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr10-6062 chr10 129054202 129054412 + 11.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 141474 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr7-2042 chr7 100602115 100602325 + 11.3 0.000 promoter-TSS (NM_002593) promoter-TSS (NM_002593) -143 NM_002593 5118 Hs.202097 NM_002593 ENSG00000106333 PCOLCE PCPE|PCPE-1|PCPE1 procollagen C-endopeptidase enhancer protein-coding chr5-3987 chr5 15411369 15411579 + 11.3 0.000 Intergenic Intergenic -88706 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr6-1721 chr6 35089921 35090131 + 11.3 0.000 3' UTR (NM_015245, exon 24 of 24) 3' UTR (NM_015245, exon 24 of 24) 51313 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr1-5089 chr1 111515846 111516056 + 11.3 0.000 intron (NM_001081976, intron 1 of 5) CpG -11830 NM_000677 140 Hs.281342 NM_000677 ENSG00000282608 ADORA3 A3AR adenosine A3 receptor protein-coding chr16-3747 chr16 17789740 17789950 + 11.3 0.000 Intergenic Intergenic -318885 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr18-1750 chr18 8125196 8125406 + 11.3 0.000 intron (NM_002845, intron 13 of 30) intron (NM_002845, intron 13 of 30) 241733 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chrX-567 chrX 47573386 47573596 + 11.3 0.000 intron (NM_006950, intron 12 of 12) intron (NM_006950, intron 12 of 12) -8945 NM_003254 7076 Hs.522632 NM_003254 ENSG00000102265 TIMP1 CLGI|EPA|EPO|HCI|TIMP|TIMP-1 TIMP metallopeptidase inhibitor 1 protein-coding chr7-2102 chr7 5413706 5413916 + 11.3 0.000 intron (NM_001080495, intron 2 of 29) AluJr|SINE|Alu 9735 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr1-3795 chr1 11652669 11652879 + 11.3 0.000 intron (NM_012168, intron 1 of 5) intron (NM_012168, intron 1 of 5) -1633 NM_183412 93611 Hs.556006 NM_033182 ENSG00000132879 FBXO44 FBG3|FBX30|FBX6A|Fbx44|Fbxo6a F-box protein 44 protein-coding chr3-2557 chr3 63613622 63613832 + 11.3 0.000 intron (NM_001130003, intron 5 of 5) MIRb|SINE|MIR -38948 NM_001348756 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr11-6569 chr11 71837438 71837648 + 11.3 0.000 TTS (NM_001002035) TTS (NM_001002035) 4343 NM_001002035 245911 Hs.555032 NM_001002035 ENSG00000184276 DEFB108B DEFB-8|hBD-8 defensin beta 108B protein-coding chr4-7560 chr4 78437313 78437523 + 11.3 0.000 intron (NM_001166133, intron 38 of 41) intron (NM_001166133, intron 38 of 41) -114352 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr9-2558 chr9 133509458 133509668 + 11.3 0.000 Intergenic Intergenic 15396 NM_001080483 389827 NM_001080483 ENSG00000187616 MYMK MYOMAKER|TMEM226|TMEM8C myomaker, myoblast fusion factor protein-coding chr7-2287 chr7 44507512 44507722 + 11.3 0.000 Intergenic MIRc|SINE|MIR -16959 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr8-6796 chr8 95433488 95433698 + 11.3 0.000 intron (NR_038207, intron 2 of 2) intron (NR_038207, intron 2 of 2) -164392 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr10-5514 chr10 83659405 83659615 + 11.3 0.000 Intergenic MIR|SINE|MIR 17579 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr2-4314 chr2 236261487 236261697 + 11.3 0.000 intron (NM_212556, intron 1 of 5) intron (NM_212556, intron 1 of 5) 2753 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr10-6008 chr10 125188109 125188319 + 11.3 0.000 Intergenic Intergenic -27184 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr10-1183 chr10 77592926 77593136 + 11.3 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 44777 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr20-2543 chr20 35936269 35936479 + 11.3 0.000 intron (NM_016436, intron 15 of 17) intron (NM_016436, intron 15 of 17) 18252 NM_033630 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding chr13-2604 chr13 75139503 75139713 + 11.3 0.000 Intergenic Intergenic 100773 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr2-9356 chr2 227447839 227448049 + 11.3 0.000 Intergenic Intergenic -24188 NR_049888 100847081 NR_049888 ENSG00000284092 MIR5703 mir-5703 microRNA 5703 ncRNA chrX-1779 chrX 72686144 72686354 + 11.3 0.000 intron (NM_002637, intron 4 of 31) L1ME4b|LINE|L1 -2700 NR_110391 101928259 Hs.666679 NR_110391 ENSG00000231944 PHKA1-AS1 - PHKA1 antisense RNA 1 ncRNA chr2-6599 chr2 235200391 235200601 + 11.3 0.000 Intergenic LTR64|LTR|ERV1 172761 NM_001371306 chr19-3335 chr19 7364598 7364808 + 11.3 0.000 intron (NM_001367823, intron 2 of 28) intron (NM_001367823, intron 2 of 28) 15766 NM_001367823 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr9-5791 chr9 128470710 128470920 + 11.3 0.000 intron (NM_153433, intron 5 of 20) MIRb|SINE|MIR 13908 NM_153437 4957 Hs.129055 NM_002540 ENSG00000136811 ODF2 CT134|ODF2/1|ODF2/2|ODF84 outer dense fiber of sperm tails 2 protein-coding chrX-896 chrX 63514340 63514550 + 11.3 0.000 intron (NR_152613, intron 1 of 3) intron (NR_152613, intron 1 of 3) 46650 NR_015353 92249 Hs.31532 NR_015353 ENSG00000235437 LINC01278 - long intergenic non-protein coding RNA 1278 ncRNA chr12-4419 chr12 8077292 8077502 + 11.3 0.000 Intergenic Intergenic -4814 NR_024260 25977 Hs.555927 NM_015509 ENSG00000089818 NECAP1 EIEE21 NECAP endocytosis associated 1 protein-coding chr6-2403 chr6 151063507 151063717 + 11.3 0.000 intron (NM_001350486, intron 26 of 27) intron (NM_001350486, intron 26 of 27) -39063 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr17-5476 chr17 40613798 40614008 + 11.3 0.000 Intergenic Intergenic 33915 NM_003079 6605 Hs.743978 NM_003079 ENSG00000073584 SMARCE1 BAF57|CSS5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding chr11-5106 chr11 120017802 120018012 + 11.3 0.000 Intergenic Intergenic 110946 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr1-8321 chr1 51118988 51119198 + 11.3 0.000 intron (NM_001136508, intron 3 of 4) intron (NM_001136508, intron 3 of 4) 16865 NM_001136508 284546 Hs.176177 NM_001136508 ENSG00000204006 C1orf185 - chromosome 1 open reading frame 185 protein-coding chr1-3570 chr1 1636766 1636976 + 11.3 0.000 intron (NM_001787, intron 16 of 19) intron (NM_001787, intron 16 of 19) 4091 NR_002946 8511 Hs.671760 NR_002946 ENSG00000215914 MMP23A MIFR|MIFR-1|MMP21 matrix metallopeptidase 23A (pseudogene) pseudo chr13-615 chr13 30389543 30389753 + 11.3 0.000 Intergenic Intergenic -15734 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr12-2966 chr12 110109481 110109691 + 11.3 0.000 Intergenic Intergenic -14771 NM_001143779 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chrX-2093 chrX 22987589 22987799 + 11.3 0.000 intron (NR_073010, intron 3 of 11) MLT1I|LTR|ERVL-MaLR -12266 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr5-2125 chr5 76257866 76258076 + 11.3 0.000 intron (NM_014979, intron 4 of 12) (TG)n|Simple_repeat|Simple_repeat -145314 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr14-2984 chr14 51526540 51526750 + 11.3 0.000 intron (NM_001042481, intron 1 of 14) intron (NM_001042481, intron 1 of 14) 37517 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr20-3630 chr20 8207215 8207425 + 11.3 0.000 intron (NM_182734, intron 2 of 32) intron (NM_182734, intron 2 of 32) -41384 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr11-4922 chr11 64625186 64625396 + 11.3 0.000 intron (NM_138732, intron 17 of 19) intron (NM_138732, intron 17 of 19) 18254 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr10-2060 chr10 97595732 97595942 + 11.3 0.000 intron (NM_001134670, intron 1 of 2) intron (NM_001134670, intron 1 of 2) 6116 NM_001009997 414157 Hs.662302 NM_001009997 ENSG00000203942 C10orf62 bA548K23.1 chromosome 10 open reading frame 62 protein-coding chr2-4522 chr2 34072435 34072645 + 11.3 0.000 intron (NR_126403, intron 4 of 5) ERVL-E-int|LTR|ERVL 5314 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr3-10537 chr3 139560774 139560984 + 11.3 0.000 3' UTR (NM_001320510, exon 7 of 7) 3' UTR (NM_001320510, exon 7 of 7) -21137 NM_001130993 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr12-7734 chr12 92707862 92708072 + 11.3 0.000 3' UTR (NM_001178097, exon 2 of 2) 3' UTR (NM_001178097, exon 2 of 2) 4978 NM_001178097 338809 Hs.326303 NM_001037671 ENSG00000187510 C12orf74 - chromosome 12 open reading frame 74 protein-coding chr17-3215 chr17 6003247 6003457 + 11.3 0.000 Intergenic LTR24|LTR|ERV1 -67262 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr11-7551 chr11 17566448 17566658 + 11.3 0.000 intron (NM_001277269, intron 14 of 54) L1MC3|LINE|L1 19180 NM_001277269 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding chr5-5431 chr5 137325348 137325558 + 11.3 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 173873 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr3-3742 chr3 196593986 196594196 + 11.3 0.000 Intergenic AluSx1|SINE|Alu -25417 NM_001345913 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr1-8038 chr1 235898275 235898485 + 11.3 0.000 Intergenic L2a|LINE|L2 -14667 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr5-1587 chr5 490723 490933 + 11.3 0.000 intron (NM_001284351, intron 2 of 16) intron (NM_001284351, intron 2 of 16) 17592 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr8-3474 chr8 100040588 100040798 + 11.3 0.000 intron (NM_015668, intron 12 of 27) intron (NM_015668, intron 12 of 27) 36111 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA KI270730.1-1 KI270730.1 90913 91123 + 11.3 0.000 NA NA NA NA chr2-7567 chr2 24712194 24712404 + 11.3 0.000 intron (NM_001362950, intron 14 of 23) HAL1|LINE|L1 -80816 NM_024322 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr11-4589 chr11 131769033 131769243 + 11.3 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -105582 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr10-2067 chr10 100043949 100044159 + 11.3 0.000 intron (NM_001308, intron 8 of 8) intron (NM_001308, intron 8 of 8) -34107 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr16-3836 chr16 61452611 61452821 + 11.3 0.000 Intergenic L1PA7|LINE|L1 -396950 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr9-5520 chr9 107215466 107215676 + 11.3 0.000 Intergenic Intergenic -67708 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr20-872 chr20 9235557 9235767 + 11.3 0.000 intron (NM_182797, intron 1 of 35) intron (NM_182797, intron 1 of 35) 18272 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr14-1529 chr14 58678714 58678924 + 11.3 0.000 Intergenic Intergenic 39982 NR_046095 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr14-2896 chr14 36822646 36822856 + 11.3 0.000 intron (NM_001171170, intron 2 of 10) intron (NM_001171170, intron 2 of 10) 129640 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr7-2331 chr7 134807965 134808175 + 11.3 0.000 intron (NM_033157, intron 1 of 14) LTR82B|LTR|ERVL 28436 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr2-4984 chr2 204942023 204942233 + 11.3 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 396653 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr11-3775 chr11 59286390 59286600 + 11.3 0.000 Intergenic Intergenic -73568 NM_001039396 219972 Hs.744920 NM_001039396 ENSG00000197629 MPEG1 MPG1|MPS1|Mpg-1|P-2 macrophage expressed 1 protein-coding chr2-1886 chr2 84970617 84970827 + 11.3 0.000 promoter-TSS (NM_020122) promoter-TSS (NM_020122) -439 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr10-3507 chr10 70787105 70787315 + 11.3 0.000 Intergenic Intergenic -1791 NM_001318241 219793 Hs.386698 NM_152710 ENSG00000166220 TBATA C10orf27|SPATIAL thymus, brain and testes associated protein-coding chr8-3336 chr8 38073234 38073444 + 11.3 0.000 Intergenic MER5A|DNA|hAT-Charlie -32154 NM_001282272 9070 Hs.521530 NM_004674 ENSG00000129691 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ASH2 like, histone lysine methyltransferase complex subunit protein-coding chr4-5110 chr4 149057854 149058064 + 11.3 0.000 Intergenic L2b|LINE|L2 -96336 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr1-10111 chr1 100009689 100009899 + 11.3 0.000 intron (NM_001271684, intron 4 of 5) intron (NM_001271684, intron 4 of 5) -28301 NM_033055 64645 Hs.124156 NM_033055 ENSG00000156875 MFSD14A HIAT1 major facilitator superfamily domain containing 14A protein-coding chr19-4808 chr19 35195916 35196126 + 11.3 0.000 Intergenic L1MB8|LINE|L1 32704 NM_152481 148109 Hs.128069 NM_152481 ENSG00000177558 FAM187B TMEM162 family with sequence similarity 187 member B protein-coding chr12-4328 chr12 427742 427952 + 11.3 0.000 intron (NM_001130148, intron 3 of 10) LTR16|LTR|ERVL 26203 NM_032358 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr13-1715 chr13 94306075 94306285 + 11.3 0.000 intron (NM_005708, intron 6 of 8) intron (NM_005708, intron 6 of 8) -118189 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr21-709 chr21 32464123 32464333 + 11.3 0.000 intron (NR_104472, intron 2 of 6) intron (NR_104472, intron 2 of 6) 51522 NM_001320744 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr7-5899 chr7 95681605 95681815 + 11.3 0.000 Intergenic L2a|LINE|L2 -85194 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase 4 protein-coding chr7-5862 chr7 90710162 90710372 + 11.3 0.000 intron (NM_001287136, intron 1 of 13) intron (NM_001287136, intron 1 of 13) 451 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr7-3900 chr7 114409866 114410076 + 11.3 0.000 intron (NR_033766, intron 2 of 19) intron (NR_033766, intron 2 of 19) -4844 NM_014491 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr5-4481 chr5 8672925 8673135 + 11.3 0.000 Intergenic L2|LINE|L2 -166702 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr6-5305 chr6 142729366 142729576 + 11.3 0.000 Intergenic Intergenic -91582 NR_027312 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr1-4622 chr1 156747841 156748051 + 11.3 0.000 intron (NM_001319186, intron 1 of 5) intron (NM_001319186, intron 1 of 5) 3347 NM_001319187 3068 Hs.743948 NM_004494 ENSG00000143321 HDGF HMG1L2 heparin binding growth factor protein-coding chr19-2782 chr19 45745632 45745842 + 11.3 0.000 intron (NM_001310124, intron 4 of 14) AluSx|SINE|Alu 12486 NM_001310124 388553 Hs.721835 NM_001310124 ENSG00000237452 BHMG1 HMGDC basic helix-loop-helix and HMG-box containing 1 protein-coding chr17-2136 chr17 29855853 29856063 + 11.3 0.000 intron (NM_001282129, intron 1 of 15) intron (NM_001282129, intron 1 of 15) -73945 NM_001145053 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr5-3177 chr5 74166174 74166384 + 11.3 0.000 Intergenic L2|LINE|L2 142046 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr1-13670 chr1 11459229 11459439 + 11.3 0.000 Intergenic Intergenic -19821 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr15-2049 chr15 56285977 56286187 + 11.3 0.000 Intergenic MamGypLTR1d|LTR|Gypsy -41000 NM_001370561 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr13-1511 chr13 21003613 21003823 + 11.3 0.000 intron (NM_014572, intron 2 of 7) AluSx1|SINE|Alu -54290 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr18-2842 chr18 7444841 7445051 + 11.3 0.000 Intergenic Intergenic 16060 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr4-853 chr4 70704651 70704861 + 11.3 0.000 promoter-TSS (NM_001130709) promoter-TSS (NM_001130709) -181 NM_001130709 22902 Hs.740904 NM_014961 ENSG00000018189 RUFY3 RIPX|SINGAR1|ZFYVE30 RUN and FYVE domain containing 3 protein-coding chr3-7578 chr3 6392790 6393000 + 11.3 0.000 Intergenic Intergenic 412554 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr1-10740 chr1 198288907 198289117 + 11.3 0.000 intron (NM_133494, intron 7 of 9) intron (NM_133494, intron 7 of 9) 132014 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr1-6818 chr1 94395956 94396166 + 11.3 0.000 Intergenic Intergenic -22316 NM_001122674 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr8-1632 chr8 94100987 94101197 + 11.3 0.000 Intergenic Intergenic 107463 NM_004063 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding chr15-1625 chr15 86919747 86919957 + 11.3 0.000 intron (NM_152336, intron 23 of 24) intron (NM_152336, intron 23 of 24) -13028 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr20-2669 chr20 45113593 45113803 + 11.3 0.000 intron (NM_145652, intron 1 of 3) LTR57|LTR|ERVL 1476 NM_145652 149708 Hs.375031 NM_145652 ENSG00000175121 WFDC5 PRG5|WAP1|dJ211D12.5 WAP four-disulfide core domain 5 protein-coding chr4-4621 chr4 79305781 79305991 + 11.3 0.000 intron (NR_038342, intron 4 of 5) intron (NR_038342, intron 4 of 5) 20175 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr15-4290 chr15 38144976 38145186 + 11.3 0.000 Intergenic Intergenic -72091 NR_147200 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr3-4698 chr3 51192672 51192882 + 11.3 0.000 intron (NM_004947, intron 12 of 52) intron (NM_004947, intron 12 of 52) -192514 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr10-2329 chr10 63430362 63430572 + 11.3 0.000 promoter-TSS (NR_134312) promoter-TSS (NR_134312) -108 NR_134312 105378330 Hs.602852 NR_134312 LOC105378330 - uncharacterized LOC105378330 ncRNA chr15-1975 chr15 40746538 40746748 + 11.3 0.000 intron (NM_001323894, intron 4 of 12) intron (NM_001323894, intron 4 of 12) 8611 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chr10-2472 chr10 26681968 26682178 + 11.3 0.000 Intergenic MER44B|DNA|TcMar-Tigger -15351 NM_001321978 23590 Hs.558468 NM_014317 ENSG00000148459 PDSS1 COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 decaprenyl diphosphate synthase subunit 1 protein-coding chr11-6170 chr11 44680281 44680491 + 11.3 0.000 Intergenic Intergenic -46576 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chrX-2728 chrX 124293411 124293621 + 11.3 0.000 Intergenic Intergenic -39144 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr5-2115 chr5 67290621 67290831 + 11.3 0.000 Intergenic Intergenic -93927 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr1-8874 chr1 4370405 4370615 + 11.3 0.000 Intergenic L2|LINE|L2 -41541 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr2-7032 chr2 153050164 153050374 + 11.3 0.000 Intergenic L2b|LINE|L2 331632 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr9-2672 chr9 38074378 38074588 + 11.3 0.000 Intergenic L2a|LINE|L2 -5256 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr17-7503 chr17 17011066 17011276 + 11.3 0.000 Intergenic Intergenic 22842 NR_146886 105371562 Hs.579259 NR_146886 ENSG00000230969 LINC02090 - long intergenic non-protein coding RNA 2090 ncRNA chr11-3420 chr11 32984251 32984461 + 11.3 0.000 Intergenic Intergenic -31522 NM_001077242 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chr13-1118 chr13 23611139 23611349 + 11.3 0.000 intron (NM_001354985, intron 3 of 8) MER31B|LTR|ERV1 31884 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr12-1883 chr12 57078205 57078415 + 11.3 0.000 intron (NM_001130963, intron 1 of 8) intron (NM_001130963, intron 1 of 8) 481 NM_015257 23306 Hs.591040 NM_015257 ENSG00000166881 NEMP1 TMEM194|TMEM194A nuclear envelope integral membrane protein 1 protein-coding chr11-4745 chr11 84640983 84641193 + 11.3 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) 79854 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr19-2826 chr19 56153275 56153485 + 11.3 0.000 intron (NM_018337, intron 3 of 4) L2a|LINE|L2 12093 NM_018337 55311 Hs.24545 NM_018337 ENSG00000167685 ZNF444 EZF-2|EZF2|ZSCAN17 zinc finger protein 444 protein-coding chr9-5744 chr9 126699636 126699846 + 11.3 0.000 3' UTR (NM_002316, exon 8 of 8) 3' UTR (NM_002316, exon 8 of 8) 85298 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr10-5828 chr10 111730586 111730796 + 11.3 0.000 Intergenic Intergenic 453074 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr9-5081 chr9 34379412 34379622 + 11.3 0.000 intron (NM_032596, intron 6 of 6) intron (NM_032596, intron 6 of 6) 2072 NM_001252195 84688 Hs.50334 NM_032596 ENSG00000164972 C9orf24 CBE1|NYD-SP22|SMRP1|bA573M23.4 chromosome 9 open reading frame 24 protein-coding chr6-2589 chr6 81067132 81067342 + 11.3 0.000 Intergenic Intergenic 685444 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr8-1364 chr8 120757311 120757521 + 11.2 0.000 intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) -3837 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr10-3165 chr10 77164782 77164992 + 11.2 0.000 intron (NM_001271519, intron 5 of 28) intron (NM_001271519, intron 5 of 28) 24056 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr4-2788 chr4 25253061 25253271 + 11.2 0.000 intron (NM_018323, intron 2 of 9) intron (NM_018323, intron 2 of 9) 19133 NM_018323 55300 Hs.191701 NM_018323 ENSG00000038210 PI4K2B PI4KIIB|PIK42B phosphatidylinositol 4-kinase type 2 beta protein-coding chr14-2373 chr14 35709073 35709283 + 11.2 0.000 intron (NM_001346245, intron 16 of 41) L1MA3|LINE|L1 53753 NR_135620 107399303 Hs.742611 NR_135620 SNORA101B ZL4 small nucleolar RNA, H/ACA box 101B snoRNA chr2-6148 chr2 235271084 235271294 + 11.2 0.000 Intergenic Intergenic -222854 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr8-6119 chr8 28587471 28587681 + 11.2 0.000 Intergenic Intergenic -82394 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr2-13798 chr2 173667662 173667872 + 11.2 0.000 Intergenic Intergenic 296113 NM_001017371 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chrX-650 chrX 70592214 70592424 + 11.2 0.000 intron (NM_001003811, intron 25 of 30) L1MB8|LINE|L1 -136325 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr10-3641 chr10 98250750 98250960 + 11.2 0.000 intron (NM_032211, intron 14 of 14) intron (NM_032211, intron 14 of 14) 17339 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr19-3699 chr19 30265701 30265911 + 11.2 0.000 Intergenic Intergenic -106578 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr12-2806 chr12 110980184 110980394 + 11.2 0.000 Intergenic Intergenic -22471 NR_135001 105369980 Hs.564357 NR_135001 ENSG00000258240 LOC105369980 - uncharacterized LOC105369980 ncRNA chr6-1519 chr6 17638814 17639024 + 11.2 0.000 intron (NM_001278210, intron 14 of 20) MIR3|SINE|MIR 38617 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr3-3839 chr3 31635563 31635773 + 11.2 0.000 intron (NM_178862, intron 15 of 15) intron (NM_178862, intron 15 of 15) -68545 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA chr6-1572 chr6 11655615 11655825 + 11.2 0.000 Intergenic Intergenic 117971 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr6-2359 chr6 134373605 134373815 + 11.2 0.000 Intergenic Intergenic -55652 NM_001143676 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr15-782 chr15 48866004 48866214 + 11.2 0.000 intron (NM_203349, intron 6 of 11) intron (NM_203349, intron 6 of 11) -12025 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chr6-3142 chr6 110188865 110189075 + 11.2 0.000 intron (NM_015891, intron 1 of 14) MLT1N2|LTR|ERVL-MaLR 8543 NM_015891 51362 Hs.428147 NM_015891 ENSG00000168438 CDC40 EHB3|PRP17|PRPF17 cell division cycle 40 protein-coding chr8-1579 chr8 129142399 129142609 + 11.2 0.000 Intergenic L2b|LINE|L2 98736 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA chr19-1396 chr19 18866545 18866755 + 11.2 0.000 3' UTR (NM_001297549, exon 24 of 24) 3' UTR (NM_001297549, exon 24 of 24) 29508 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr3-2959 chr3 65952146 65952356 + 11.2 0.000 intron (NR_145422, intron 1 of 2) intron (NR_145422, intron 1 of 2) 2307 NR_145422 151877 Hs.476636 NR_145422 ENSG00000272610 MAGI1-IT1 - MAGI1 intronic transcript 1 ncRNA chr19-4661 chr19 16612830 16613040 + 11.2 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) 15269 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr1-5927 chr1 20358549 20358759 + 11.2 0.000 3' UTR (NM_001039500, exon 22 of 22) 3' UTR (NM_001039500, exon 22 of 22) 67779 NM_001039500 127731 Hs.205178 NM_144623 ENSG00000158816 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding chr19-1591 chr19 11195028 11195238 + 11.2 0.000 promoter-TSS (NM_015493) promoter-TSS (NM_015493) -543 NM_015493 25959 Hs.284208 NM_015493 ENSG00000197256 KANK2 ANKRD25|MXRA3|NPHS16|PPKWH|SIP KN motif and ankyrin repeat domains 2 protein-coding chr14-2547 chr14 23635594 23635804 + 11.2 0.000 promoter-TSS (NM_182908) promoter-TSS (NM_182908) -665 NM_182908 10202 Hs.272499 NM_005794 ENSG00000100867 DHRS2 HEP27|SDR25C1 dehydrogenase/reductase 2 protein-coding chr1-6045 chr1 81990868 81991078 + 11.2 0.000 exon (NM_001366005, exon 24 of 24) exon (NM_001366005, exon 24 of 24) 188520 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr1-7695 chr1 22636395 22636605 + 11.2 0.000 promoter-TSS (NM_001347466) promoter-TSS (NM_001347466) -128 NM_015991 712 Hs.632379 NM_015991 ENSG00000173372 C1QA - complement C1q A chain protein-coding chr7-2067 chr7 137967292 137967502 + 11.2 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 14049 NR_161346 100130880 Hs.712161 NR_161346 CREB3L2-AS1 - CREB3L2 antisense RNA 1 ncRNA chr11-2607 chr11 134047637 134047847 + 11.2 0.000 Intergenic Intergenic 15470 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LINC02731 - long intergenic non-protein coding RNA 2731 ncRNA chr6-2486 chr6 77668173 77668383 + 11.2 0.000 intron (NM_001322247, intron 1 of 4) L3|LINE|CR1 15239 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr16-3241 chr16 86289355 86289565 + 11.2 0.000 intron (NR_038438, intron 1 of 2) intron (NR_038438, intron 1 of 2) 3029 NR_038438 146513 Hs.434338 NR_038438 ENSG00000268532 LINC02135 - long intergenic non-protein coding RNA 2135 ncRNA chr4-1597 chr4 25953792 25954002 + 11.2 0.000 Intergenic Intergenic 39705 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr8-4903 chr8 89043391 89043601 + 11.2 0.000 Intergenic MER11B|LTR|ERVK 714215 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr2-5034 chr2 236251161 236251371 + 11.2 0.000 intron (NM_212556, intron 1 of 5) intron (NM_212556, intron 1 of 5) 13079 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr12-2197 chr12 22974932 22975142 + 11.2 0.000 Intergenic Intergenic -200599 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr11-3784 chr11 62418605 62418815 + 11.2 0.000 promoter-TSS (NM_003357) promoter-TSS (NM_003357) -323 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr6-2684 chr6 19668714 19668924 + 11.2 0.000 Intergenic MamTip2|DNA|hAT-Tip100 135940 NR_134651 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr8-2021 chr8 102331376 102331586 + 11.2 0.000 intron (NM_001282873, intron 9 of 58) intron (NM_001282873, intron 9 of 58) 81208 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr17-5180 chr17 12121668 12121878 + 11.2 0.000 intron (NM_001281435, intron 8 of 11) L1MC5a|LINE|L1 39874 NR_030613 100126313 NR_030613 ENSG00000266297 MIR744 MIRN744|hsa-mir-744|mir-744 microRNA 744 ncRNA chr3-2239 chr3 46127625 46127835 + 11.2 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 80583 NM_001295 1230 Hs.301921 NM_001295 ENSG00000163823 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 C-C motif chemokine receptor 1 protein-coding chr16-3497 chr16 9247886 9248096 + 11.2 0.000 Intergenic Intergenic -107597 NR_135195 101927009 Hs.537273 NR_135195 ENSG00000261617 LINC02177 - long intergenic non-protein coding RNA 2177 ncRNA chr6-4334 chr6 16999549 16999759 + 11.2 0.000 Intergenic L2b|LINE|L2 -102604 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr16-1870 chr16 81501145 81501355 + 11.2 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) 5896 NM_030629 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding chr2-3278 chr2 27199476 27199686 + 11.2 0.000 TTS (NM_021095) TTS (NM_021095) -12450 NM_080592 51374 Hs.9527 NM_016085 ENSG00000138085 ATRAID APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18 all-trans retinoic acid induced differentiation factor protein-coding chr3-5002 chr3 23264429 23264639 + 11.2 0.000 intron (NM_001370225, intron 3 of 5) L4_A_Mam|LINE|RTE-X 61207 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr17-2684 chr17 47420832 47421042 + 11.2 0.000 intron (NM_001195192, intron 21 of 21) SVA_D|Retroposon|SVA 71683 NR_033934 653479 Hs.537279 NR_033934 MRPL45P2 - mitochondrial ribosomal protein L45 pseudogene 2 pseudo chr4-2072 chr4 20172238 20172448 + 11.2 0.000 Intergenic LTR82B|LTR|ERVL -79562 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chrX-897 chrX 66514432 66514642 + 11.2 0.000 Intergenic L1PA15|LINE|L1 101493 NM_001242310 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr2-4265 chr2 227406304 227406514 + 11.2 0.000 Intergenic Intergenic -27103 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr3-3231 chr3 13318913 13319123 + 11.2 0.000 intron (NM_024923, intron 39 of 39) intron (NM_024923, intron 39 of 39) 101304 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr12-2248 chr12 74791568 74791778 + 11.2 0.000 Intergenic LTR33|LTR|ERVL 253838 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr21-324 chr21 36289172 36289382 + 11.2 0.000 intron (NM_005128, intron 35 of 36) intron (NM_005128, intron 35 of 36) -30912 NM_001320446 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr12-4571 chr12 29826092 29826302 + 11.2 0.000 Intergenic ERVL-E-int|LTR|ERVL -41438 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr1-7132 chr1 203785534 203785744 + 11.2 0.000 Intergenic Intergenic -9898 NM_014827 9877 Hs.532399 NM_014827 ENSG00000058673 ZC3H11A ZC3HDC11A zinc finger CCCH-type containing 11A protein-coding chr9-3930 chr9 135533348 135533558 + 11.2 0.000 Intergenic L1M5|LINE|L1 12013 NM_001252619 3933 Hs.530311 NM_002297 ENSG00000160349 LCN1 PMFA|TLC|TP|VEGP lipocalin 1 protein-coding chr11-4707 chr11 66937122 66937332 + 11.2 0.000 intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) -2721 NR_036121 100423029 NR_036121 ENSG00000266423 MIR3163 - microRNA 3163 ncRNA chr20-1872 chr20 41619656 41619866 + 11.2 0.000 Intergenic Intergenic -1384 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chrX-3584 chrX 76785264 76785474 + 11.2 0.000 intron (NR_110405, intron 1 of 2) L1PA3|LINE|L1 133991 NR_029909 494333 NR_029909 ENSG00000283242 MIR384 MIRN384|hsa-mir-384 microRNA 384 ncRNA chr11-3394 chr11 132295986 132296196 + 11.2 0.000 intron (NM_016522, intron 3 of 6) L2a|LINE|L2 11789 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr14-754 chr14 74712976 74713186 + 11.2 0.000 promoter-TSS (NM_001039479) promoter-TSS (NM_001039479) -1 NM_001039479 9870 Hs.497417 NM_014821 ENSG00000119682 AREL1 FIEL1|KIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding chr9-2227 chr9 137648633 137648843 + 11.2 0.000 intron (NM_001354612, intron 1 of 8) L2|LINE|L2 29733 NM_001354611 79813 Hs.495511 NM_024757 ENSG00000181090 EHMT1 EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D euchromatic histone lysine methyltransferase 1 protein-coding chr3-8762 chr3 2770682 2770892 + 11.2 0.000 intron (NM_175607, intron 6 of 24) intron (NM_175607, intron 6 of 24) -121428 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr21-645 chr21 23261369 23261579 + 11.2 0.000 Intergenic THE1B|LTR|ERVL-MaLR 123361 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA chr22-1617 chr22 28091373 28091583 + 11.2 0.000 intron (NM_001145418, intron 12 of 22) intron (NM_001145418, intron 12 of 22) -170866 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr22-1717 chr22 19353339 19353549 + 11.2 0.000 exon (NM_003325, exon 23 of 25) exon (NM_003325, exon 23 of 25) -61725 NM_007098 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr2-4659 chr2 193746727 193746937 + 11.2 0.000 Intergenic L1PA13|LINE|L1 -597437 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr9-2668 chr9 37550730 37550940 + 11.2 0.000 intron (NM_012166, intron 1 of 10) MSTD-int|LTR|ERVL-MaLR 25545 NM_012166 26267 Hs.709527 NM_012166 ENSG00000147912 FBXO10 FBX10|PRMT11 F-box protein 10 protein-coding chr10-1039 chr10 11685268 11685478 + 11.2 0.000 Intergenic Intergenic -57009 NM_024693 79746 Hs.22242 NM_024693 ENSG00000134463 ECHDC3 - enoyl-CoA hydratase domain containing 3 protein-coding chr1-2578 chr1 34164972 34165182 + 11.2 0.000 exon (NM_001281956, exon 1 of 71) exon (NM_001281956, exon 1 of 71) 197 NM_001281956 114784 Hs.656915 NM_052896 ENSG00000121904 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding chr10-6963 chr10 67487008 67487218 + 11.2 0.000 intron (NM_001127384, intron 5 of 17) intron (NM_001127384, intron 5 of 17) -83703 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr5-2820 chr5 35063425 35063635 + 11.2 0.000 3' UTR (NM_000949, exon 10 of 10) 3' UTR (NM_000949, exon 10 of 10) -15581 NM_031900 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr16-3768 chr16 27892766 27892976 + 11.2 0.000 intron (NM_001109763, intron 2 of 6) intron (NM_001109763, intron 2 of 6) -4714 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr22-986 chr22 37526201 37526411 + 11.2 0.000 Intergenic L2b|LINE|L2 -6891 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr2-5194 chr2 37858388 37858598 + 11.2 0.000 intron (NR_110012, intron 2 of 3) intron (NR_110012, intron 2 of 3) 17370 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr10-5443 chr10 78449441 78449651 + 11.2 0.000 Intergenic Intergenic 182204 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr19-1157 chr19 913114 913324 + 11.2 0.000 promoter-TSS (NM_138774) promoter-TSS (NM_138774) 0 NM_138774 91300 Hs.557655 NM_138774 ENSG00000198858 R3HDM4 C19orf22 R3H domain containing 4 protein-coding chr6-4812 chr6 80082487 80082697 + 11.2 0.000 Intergenic Intergenic -24018 NM_000056 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr1-5239 chr1 201529078 201529288 + 11.2 0.000 intron (NR_160747, intron 1 of 1) intron (NR_160747, intron 1 of 1) 9279 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr15-2320 chr15 80087167 80087377 + 11.2 0.000 intron (NM_001242912, intron 2 of 6) L1MB4|LINE|L1 -11144 NM_001242919 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr5-3544 chr5 34834238 34834448 + 11.2 0.000 Intergenic Intergenic -4821 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding chr12-2545 chr12 106137742 106137952 + 11.2 0.000 intron (NM_014840, intron 1 of 6) intron (NM_014840, intron 1 of 6) 2186 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr3-2273 chr3 62066467 62066677 + 11.2 0.000 intron (NM_002841, intron 4 of 29) intron (NM_002841, intron 4 of 29) 252375 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr17-1973 chr17 29575453 29575663 + 11.2 0.000 intron (NM_014030, intron 17 of 19) intron (NM_014030, intron 17 of 19) 6857 NM_001346079 90313 Hs.514050 NM_138349 ENSG00000167543 TP53I13 DSCP1 tumor protein p53 inducible protein 13 protein-coding chr8-3475 chr8 100082478 100082688 + 11.2 0.000 intron (NM_015668, intron 3 of 27) MIRb|SINE|MIR 23043 NM_001286693 26166 Hs.120021 NM_015668 ENSG00000132554 RGS22 CT145|PRTD-NY2 regulator of G protein signaling 22 protein-coding chr8-3190 chr8 109977196 109977406 + 11.2 0.000 Intergenic Intergenic -1530 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr2-12733 chr2 82234026 82234236 + 11.2 0.000 Intergenic Intergenic -622672 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr5-1953 chr5 53836266 53836476 + 11.2 0.000 Intergenic L1ME1|LINE|L1 -16689 NR_147167 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr12-3611 chr12 57666743 57666953 + 11.2 0.000 Intergenic MER57-int|LTR|ERV1 -27107 NM_001261421 10956 Hs.527861 NM_006812 ENSG00000135506 OS9 ERLEC2|OS-9 OS9 endoplasmic reticulum lectin protein-coding chr2-9096 chr2 204303118 204303328 + 11.2 0.000 Intergenic Intergenic -242252 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr1-6460 chr1 19436158 19436368 + 11.2 0.000 intron (NM_001206540, intron 1 of 9) Tigger7|DNA|TcMar-Tigger 48032 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr12-2337 chr12 3137370 3137580 + 11.2 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 60096 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr1-4503 chr1 26020344 26020554 + 11.2 0.000 Intergenic Intergenic -1326 NM_004455 2134 Hs.150956 NM_004455 ENSG00000158008 EXTL1 EXTL exostosin like glycosyltransferase 1 protein-coding chr11-6892 chr11 104259952 104260162 + 11.2 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -95910 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr17-3966 chr17 63974926 63975136 + 11.2 0.000 Intergenic Intergenic -2113 NM_000334 6329 Hs.46038 NM_000334 ENSG00000007314 SCN4A CMS16|HOKPP2|HYKPP|HYPP|NAC1A|Na(V)1.4|Nav1.4|SkM1 sodium voltage-gated channel alpha subunit 4 protein-coding chr16-2137 chr16 14181408 14181618 + 11.2 0.000 intron (NM_001308142, intron 3 of 16) intron (NM_001308142, intron 3 of 16) -5173 NM_001365415 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr6-556 chr6 70667729 70667939 + 11.2 0.000 promoter-TSS (NM_001281439) promoter-TSS (NM_001281439) -49 NM_001281439 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr1-4762 chr1 9337958 9338168 + 11.2 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 45169 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr6-3304 chr6 161010522 161010732 + 11.2 0.000 intron (NM_005922, intron 1 of 26) intron (NM_005922, intron 1 of 26) 18858 NM_005922 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr9-5363 chr9 90533707 90533917 + 11.2 0.000 intron (NR_034157, intron 1 of 5) L1MDa|LINE|L1 48934 NR_034157 340515 Hs.522284 NM_001105317 LINC01501 - long intergenic non-protein coding RNA 1501 ncRNA chr2-2049 chr2 163774929 163775139 + 11.2 0.000 Intergenic Intergenic -39026 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chrX-1768 chrX 66342095 66342305 + 11.2 0.000 Intergenic L1PA8|LINE|L1 174450 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr20-3708 chr20 16069363 16069573 + 11.2 0.000 Intergenic L2a|LINE|L2 -83586 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr20-589 chr20 32971733 32971943 + 11.2 0.000 Intergenic Intergenic 32595 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr13-2452 chr13 49374779 49374989 + 11.2 0.000 intron (NM_001079670, intron 5 of 10) intron (NM_001079670, intron 5 of 10) 26658 NM_030925 81617 Hs.87159 NM_030925 ENSG00000102547 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39 like protein-coding KQ759759.1-1 KQ759759.1 84937 85147 + 11.2 0.000 NA NA NA NA chr15-1405 chr15 43214869 43215079 + 11.2 0.000 intron (NM_001114134, intron 3 of 12) intron (NM_001114134, intron 3 of 12) 6044 NM_000119 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chr12-2886 chr12 39222331 39222541 + 11.2 0.000 Intergenic AluSx|SINE|Alu 220684 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr1-6665 chr1 48636488 48636698 + 11.2 0.000 intron (NM_001323575, intron 8 of 12) intron (NM_001323575, intron 8 of 12) 140298 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr19-1872 chr19 19261993 19262203 + 11.2 0.000 intron (NM_023002, intron 1 of 4) GA-rich|Low_complexity|Low_complexity 706 NM_023002 404037 Hs.367829 NM_023002 ENSG00000187664 HAPLN4 BRAL2 hyaluronan and proteoglycan link protein 4 protein-coding chr1-4085 chr1 223776038 223776248 + 11.2 0.000 TTS (NM_001748) TTS (NM_001748) 63604 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chrX-1517 chrX 19133899 19134109 + 11.2 0.000 Intergenic MIR3|SINE|MIR -11367 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr9-8270 chr9 112488139 112488349 + 11.2 0.000 promoter-TSS (NM_001350649) promoter-TSS (NM_001350649) -600 NM_001350649 100133204 Hs.662552 NM_001350649 C9orf147 - chromosome 9 open reading frame 147 protein-coding chr22-705 chr22 42978666 42978876 + 11.2 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) -18435 NM_001349970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr2-3677 chr2 189022584 189022794 + 11.2 0.000 Intergenic Intergenic 27059 NR_037401 100500837 NR_037401 ENSG00000284180 MIR3606 mir-3606 microRNA 3606 ncRNA chr5-2891 chr5 109558457 109558667 + 11.2 0.000 Intergenic L2c|LINE|L2 -130804 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr11-2093 chr11 107565535 107565745 + 11.2 0.000 promoter-TSS (NM_001301010) promoter-TSS (NM_001301010) 95 NM_001301010 91801 Hs.503763 NM_138775 ENSG00000137760 ALKBH8 ABH8|TRM9|TRMT9|TRMT9A alkB homolog 8, tRNA methyltransferase protein-coding chr1-3716 chr1 214124452 214124662 + 11.2 0.000 Intergenic Intergenic 136024 NM_002763 5629 Hs.741808 NM_002763 ENSG00000117707 PROX1 - prospero homeobox 1 protein-coding chr5-3559 chr5 56201200 56201410 + 11.2 0.000 intron (NM_024669, intron 2 of 11) intron (NM_024669, intron 2 of 11) 32025 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr5-1900 chr5 158967746 158967956 + 11.2 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 130105 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr2-4387 chr2 46566220 46566430 + 11.2 0.000 intron (NM_012249, intron 2 of 4) intron (NM_012249, intron 2 of 4) 13913 NR_104182 100506142 Hs.658541 NR_104182 ENSG00000250116 LOC100506142 - uncharacterized LOC100506142 ncRNA chr13-842 chr13 79631282 79631492 + 11.2 0.000 Intergenic MLT1F-int|LTR|ERVL-MaLR 64660 NR_125772 103724388 Hs.434862 NR_125772 ENSG00000227676 LINC01068 - long intergenic non-protein coding RNA 1068 ncRNA chr10-1806 chr10 113385842 113386052 + 11.2 0.000 Intergenic Intergenic -164884 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr2-4126 chr2 159047269 159047479 + 11.2 0.000 intron (NM_001350065, intron 3 of 27) intron (NM_001350065, intron 3 of 27) 78734 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr7-4591 chr7 15215624 15215834 + 11.2 0.000 intron (NM_001004320, intron 12 of 12) intron (NM_001004320, intron 12 of 12) -240871 NM_001350717 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr7-2510 chr7 43463564 43463774 + 11.2 0.000 exon (NM_015052, exon 14 of 30) exon (NM_015052, exon 14 of 30) 58873 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr9-3573 chr9 73780877 73781087 + 11.2 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -590549 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr2-4196 chr2 198286502 198286712 + 11.2 0.000 Intergenic Intergenic 88490 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr10-6353 chr10 125745310 125745520 + 11.2 0.000 intron (NR_120633, intron 4 of 4) MLT1B|LTR|ERVL-MaLR 6645 NR_120633 101927983 Hs.634269 NR_120633 ENSG00000236991 EDRF1-AS1 - EDRF1 antisense RNA 1 ncRNA chr8-3278 chr8 20009591 20009801 + 11.2 0.000 Intergenic MER34C|LTR|ERV1 70443 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr6-2551 chr6 36123822 36124032 + 11.2 0.000 Intergenic Intergenic -6586 NM_002754 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr1-3414 chr1 244861661 244861871 + 11.2 0.000 intron (NM_031844, intron 3 of 13) intron (NM_031844, intron 3 of 13) 2759 NM_004501 3192 Hs.106212 NM_004501 ENSG00000153187 HNRNPU EIEE54|GRIP120|HNRNPU-AS1|HNRPU|SAF-A|SAFA|U21.1|hnRNP U|pp120 heterogeneous nuclear ribonucleoprotein U protein-coding chr20-1057 chr20 9179345 9179555 + 11.2 0.000 intron (NM_001172646, intron 1 of 37) MLT1D|LTR|ERVL-MaLR -37940 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr4-2405 chr4 84792252 84792462 + 11.2 0.000 intron (NM_014991, intron 21 of 67) intron (NM_014991, intron 21 of 67) -173259 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr2-4212 chr2 207710766 207710976 + 11.2 0.000 promoter-TSS (NM_001142300) promoter-TSS (NM_001142300) -669 NM_152523 151195 Hs.471234 NM_152523 ENSG00000163249 CCNYL1 - cyclin Y like 1 protein-coding chr5-2458 chr5 136032634 136032844 + 11.2 0.000 intron (NM_000358, intron 1 of 16) intron (NM_000358, intron 1 of 16) 3751 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding chr1-4132 chr1 2101139 2101349 + 11.2 0.000 intron (NM_001350804, intron 2 of 15) intron (NM_001350804, intron 2 of 15) -3472 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr20-1150 chr20 50163702 50163912 + 11.2 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -8763 NR_109943 101927541 Hs.570391 NR_109943 ENSG00000231742 LINC01273 - long intergenic non-protein coding RNA 1273 ncRNA chr16-2754 chr16 2769588 2769798 + 11.2 0.000 intron (NM_016333, intron 12 of 14) L2c|LINE|L2 7587 NM_207013 6923 Hs.172772 NM_007108 ENSG00000103363 ELOB SIII|TCEB2 elongin B protein-coding chr2-12969 chr2 104416720 104416930 + 11.2 0.000 Intergenic Intergenic -2794 NR_135589 101927331 Hs.352254 NR_135589 ENSG00000225765 LINC01831 - long intergenic non-protein coding RNA 1831 ncRNA chr3-2837 chr3 22390662 22390872 + 11.2 0.000 Intergenic Intergenic 433628 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr16-4438 chr16 53241251 53241461 + 11.2 0.000 intron (NM_001352157, intron 11 of 37) L2a|LINE|L2 32905 NM_001352158 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr4-1804 chr4 32560325 32560535 + 11.2 0.000 Intergenic L1MEf|LINE|L1 209392 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr10-2948 chr10 32903461 32903671 + 11.2 0.000 intron (NM_002211, intron 15 of 15) intron (NM_002211, intron 15 of 15) -2094 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr17-3418 chr17 13725709 13725919 + 11.2 0.000 Intergenic Intergenic -123885 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr17-2579 chr17 68049025 68049235 + 11.2 0.000 Intergenic Intergenic 13170 NM_001320611 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr7-2028 chr7 72091617 72091827 + 11.2 0.000 intron (NM_001363460, intron 3 of 5) MER102c|DNA|hAT-Charlie 245669 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr5-4295 chr5 150320382 150320592 + 11.2 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -17582 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr9-3278 chr9 36419253 36419463 + 11.2 0.000 Intergenic Intergenic -18160 NM_194330 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr17-4984 chr17 80936930 80937140 + 11.2 0.000 intron (NM_020761, intron 24 of 33) intron (NM_020761, intron 24 of 33) 34178 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr13-578 chr13 49858389 49858599 + 11.2 0.000 Intergenic Intergenic -31915 NR_003268 220429 Hs.448219 NR_003268 ENSG00000181358 CTAGE10P - CTAGE family member 10, pseudogene pseudo chr6-2288 chr6 85228055 85228265 + 11.2 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 162026 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr4-2612 chr4 139021625 139021835 + 11.2 0.000 intron (NM_012118, intron 1 of 2) intron (NM_012118, intron 1 of 2) 5949 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr2-4927 chr2 162244644 162244854 + 11.2 0.000 Intergenic Intergenic -1304 NM_004460 2191 Hs.654370 NM_004460 ENSG00000078098 FAP DPPIV|FAPA|FAPalpha|SIMP fibroblast activation protein alpha protein-coding chr7-1925 chr7 23234614 23234824 + 11.2 0.000 Intergenic MER58B|DNA|hAT-Charlie -12056 NM_002510 10457 Hs.190495 NM_002510 ENSG00000136235 GPNMB HGFIN|NMB|PLCA3 glycoprotein nmb protein-coding chr19-1494 chr19 32936091 32936301 + 11.2 0.000 intron (NM_032816, intron 7 of 18) MER52D|LTR|ERV1 35762 NM_032816 84902 Hs.599703 NM_032816 ENSG00000121289 CEP89 CCDC123|CEP123 centrosomal protein 89 protein-coding chr12-3095 chr12 18382521 18382731 + 11.2 0.000 intron (NM_001288774, intron 14 of 32) MER20|DNA|hAT-Charlie 121086 NM_001288772 5288 Hs.22500 NM_004570 ENSG00000139144 PIK3C2G PI3K-C2-gamma|PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma protein-coding chr4-1080 chr4 138919209 138919419 + 11.2 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 93332 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr4-2531 chr4 52173681 52173891 + 11.2 0.000 Intergenic Intergenic 122482 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr17-5745 chr17 59074716 59074926 + 11.2 0.000 intron (NR_148346, intron 8 of 23) L2a|LINE|L2 32059 NM_001320987 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding chr2-5058 chr2 4924025 4924235 + 11.2 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -267908 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr2-3494 chr2 202035432 202035642 + 11.2 0.000 exon (NM_003507, exon 1 of 1) exon (NM_003507, exon 1 of 1) 950 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr10-5904 chr10 118953786 118953996 + 11.2 0.000 Intergenic Intergenic -75823 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr1-4380 chr1 156705105 156705315 + 11.2 0.000 intron (NM_001199723, intron 2 of 4) CpG 373 NM_001878 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding chr13-1704 chr13 90719573 90719783 + 11.2 0.000 Intergenic Intergenic 206919 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr17-2871 chr17 32481352 32481562 + 11.2 0.000 3' UTR (NM_001270482, exon 13 of 13) 3' UTR (NM_001270482, exon 13 of 13) -5536 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr6-2578 chr6 68038783 68038993 + 11.2 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -16463 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr14-2596 chr14 53189560 53189770 + 11.2 0.000 Intergenic MIR3|SINE|MIR 36311 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr8-3061 chr8 16736777 16736987 + 11.2 0.000 Intergenic Intergenic 265463 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr1-4684 chr1 225880891 225881101 + 11.2 0.000 intron (NM_014698, intron 1 of 24) intron (NM_014698, intron 1 of 24) 1384 NM_014698 9725 Hs.119387 NM_014698 ENSG00000196187 TMEM63A KIAA0792 transmembrane protein 63A protein-coding chr19-3484 chr19 37793204 37793414 + 11.2 0.000 Intergenic Intergenic -13719 NM_152360 126231 Hs.531262 NM_152360 ENSG00000189144 ZNF573 - zinc finger protein 573 protein-coding chr10-1273 chr10 5283484 5283694 + 11.2 0.000 Intergenic MIR3|SINE|MIR -12353 NR_149060 110806285 NR_149060 ENSG00000224034 LINC02561 - long intergenic non-protein coding RNA 2561 ncRNA chr4-1454 chr4 139734993 139735203 + 11.2 0.000 intron (NM_018717, intron 2 of 4) CpG 69279 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr1-5267 chr1 205147317 205147527 + 11.2 0.000 3' UTR (NM_015375, exon 13 of 13) 3' UTR (NM_015375, exon 13 of 13) -25444 NM_005057 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr19-2419 chr19 37809461 37809671 + 11.2 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -7845 NR_040013 644554 Hs.683930 NR_040013 LOC644554 - uncharacterized LOC644554 ncRNA chrX-2449 chrX 81320058 81320268 + 11.2 0.000 Intergenic L1PA5|LINE|L1 118061 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr16-1765 chr16 89644411 89644621 + 11.2 0.000 TTS (NM_002768) TTS (NM_002768) 13192 NR_046418 5119 Hs.589427 NM_002768 ENSG00000131165 CHMP1A CHMP1|PCH8|PCOLN3|PRSM1|VPS46-1|VPS46A charged multivesicular body protein 1A protein-coding chr2-4707 chr2 229852816 229853026 + 11.2 0.000 intron (NM_001348330, intron 4 of 41) intron (NM_001348330, intron 4 of 41) 68758 NM_001348334 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr9-4224 chr9 75699452 75699662 + 11.2 0.000 Intergenic Intergenic -191087 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr12-3330 chr12 88299814 88300024 + 11.2 0.000 Intergenic Intergenic 157612 NR_159381 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding chr4-3014 chr4 126627151 126627361 + 11.2 0.000 Intergenic BLACKJACK|DNA|hAT-Blackjack -1005701 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr3-1978 chr3 133136353 133136563 + 11.2 0.000 intron (NM_001282865, intron 1 of 3) intron (NM_001282865, intron 1 of 3) 11637 NM_001282865 66000 Hs.191616 NM_023943 ENSG00000144868 TMEM108 CT124|RTLN transmembrane protein 108 protein-coding chr11-2682 chr11 74863297 74863507 + 11.2 0.000 intron (NM_001270381, intron 8 of 15) intron (NM_001270381, intron 8 of 15) 85689 NM_001270380 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr10-2751 chr10 119562153 119562363 + 11.2 0.000 Intergenic Intergenic -19539 NM_001005339 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr1-3888 chr1 55322018 55322228 + 11.2 0.000 Intergenic Intergenic 96482 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr2-7162 chr2 203125685 203125895 + 11.2 0.000 intron (NM_001114132, intron 19 of 54) intron (NM_001114132, intron 19 of 54) 110911 NM_001114132 65065 Hs.648846 NM_198945 ENSG00000144426 NBEAL1 A530083I02Rik|ALS2CR16|ALS2CR17 neurobeachin like 1 protein-coding chr6-1905 chr6 16751487 16751697 + 11.2 0.000 intron (NR_152112, intron 1 of 1) intron (NR_152112, intron 1 of 1) 8592 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chrX-2810 chrX 134914337 134914547 + 11.2 0.000 intron (NM_001306188, intron 1 of 4) intron (NM_001306188, intron 1 of 4) 815 NM_019556 56180 Hs.590789 NM_019556 ENSG00000101928 MOSPD1 DJ473B4 motile sperm domain containing 1 protein-coding chr1-6724 chr1 63147108 63147318 + 11.2 0.000 Intergenic L2c|LINE|L2 -134742 NR_146606 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr12-1086 chr12 62866843 62867053 + 11.2 0.000 intron (NM_020700, intron 1 of 9) intron (NM_020700, intron 1 of 9) 68202 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr1-5098 chr1 116270028 116270238 + 11.2 0.000 Intergenic Intergenic -103111 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr11-4479 chr11 108340609 108340819 + 11.2 0.000 intron (NM_001351834, intron 57 of 63) MER2|DNA|TcMar-Tigger 117185 NM_001351836 472 Hs.367437 NM_000051 ENSG00000149311 ATM AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1 ATM serine/threonine kinase protein-coding chr18-890 chr18 47832485 47832695 + 11.2 0.000 TTS (NM_001135937) TTS (NM_001135937) 98069 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr7-1377 chr7 126702700 126702910 + 11.2 0.000 intron (NM_001371088, intron 7 of 7) LTR67B|LTR|ERVL 355379 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr12-1307 chr12 7859835 7860045 + 11.2 0.000 intron (NM_001286237, intron 1 of 9) L2c|LINE|L2 12975 NM_001286233 144195 Hs.655169 NM_153449 ENSG00000173262 SLC2A14 GLUT14|SLC2A3P3 solute carrier family 2 member 14 protein-coding chr4-1446 chr4 119693157 119693367 + 11.2 0.000 Intergenic Intergenic -64458 NM_001083 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr12-2215 chr12 47527858 47528068 + 11.2 0.000 Intergenic AluJr4|SINE|Alu 112955 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr11-6098 chr11 34735708 34735918 + 11.2 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 103247 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr1-3780 chr1 7455026 7455236 + 11.2 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) -65377 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr12-2415 chr12 48564981 48565191 + 11.2 0.000 Intergenic Intergenic 4960 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr12-2787 chr12 69148005 69148215 + 11.2 0.000 Intergenic Intergenic -91459 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr12-2682 chr12 68641148 68641358 + 11.2 0.000 intron (NM_015646, intron 1 of 7) AluJb|SINE|Alu -13878 NR_033335 100379132 Hs.724530 NR_033335 ENSG00000206650 SNORA70G U70G small nucleolar RNA, H/ACA box 70G snoRNA chr9-6431 chr9 74545700 74545910 + 11.2 0.000 intron (NM_006914, intron 1 of 9) intron (NM_006914, intron 1 of 9) -47252 NR_125791 103752585 Hs.635501 NR_125791 RORB-AS1 - RORB antisense RNA 1 ncRNA chr3-4402 chr3 196778561 196778771 + 11.2 0.000 intron (NM_002577, intron 1 of 14) L1MC3|LINE|L1 38809 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr5-2977 chr5 178221663 178221873 + 11.2 0.000 intron (NR_103510, intron 10 of 13) intron (NR_103510, intron 10 of 13) 11034 NM_153373 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr4-3132 chr4 172680895 172681105 + 11.2 0.000 intron (NR_125894, intron 1 of 2) intron (NR_125894, intron 1 of 2) 7917 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr3-3548 chr3 48227376 48227586 + 11.2 0.000 Intergenic FLAM_C|SINE|Alu 3986 NM_004345 820 Hs.51120 NM_004345 ENSG00000164047 CAMP CAP-18|CAP18|CRAMP|FALL-39|FALL39|HSD26|LL37 cathelicidin antimicrobial peptide protein-coding chrX-624 chrX 47582159 47582369 + 11.2 0.000 promoter-TSS (NM_003254) promoter-TSS (NM_003254) -172 NM_003254 7076 Hs.522632 NM_003254 ENSG00000102265 TIMP1 CLGI|EPA|EPO|HCI|TIMP|TIMP-1 TIMP metallopeptidase inhibitor 1 protein-coding chr10-3921 chr10 79090058 79090268 + 11.2 0.000 intron (NM_020338, intron 1 of 24) MIR3|SINE|MIR 21197 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr10-4335 chr10 28077727 28077937 + 11.2 0.000 intron (NR_134518, intron 11 of 16) intron (NR_134518, intron 11 of 16) -4454 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr8-4166 chr8 78441355 78441565 + 11.2 0.000 Intergenic L2b|LINE|L2 -74880 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr3-7154 chr3 185927376 185927586 + 11.2 0.000 intron (NM_004593, intron 1 of 8) intron (NM_004593, intron 1 of 8) 10533 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr16-6476 chr16 57966332 57966542 + 11.2 0.000 intron (NM_001297, intron 2 of 32) intron (NM_001297, intron 2 of 32) 4691 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr3-2775 chr3 175267223 175267433 + 11.2 0.000 intron (NM_207015, intron 4 of 13) intron (NM_207015, intron 4 of 13) 3768 NR_046713 100874244 Hs.581176 NR_046713 NAALADL2-AS2 - NAALADL2 antisense RNA 2 ncRNA chr8-3162 chr8 92063407 92063617 + 11.2 0.000 promoter-TSS (NM_004349) promoter-TSS (NM_004349) -878 NM_004349 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr6-945 chr6 150005220 150005430 + 11.2 0.000 promoter-TSS (NR_024045) promoter-TSS (NR_024045) -181 NR_024045 646024 Hs.560537 NR_024045 ENSG00000218358 RAET1K - retinoic acid early transcript 1K pseudogene pseudo chr6-5713 chr6 137861463 137861673 + 11.2 0.000 intron (NR_049793, intron 3 of 3) L2a|LINE|L2 -5691 NM_001270508 7128 Hs.211600 NM_006290 ENSG00000118503 TNFAIP3 A20|AISBL|OTUD7C|TNFA1P2 TNF alpha induced protein 3 protein-coding chr16-3193 chr16 84642106 84642316 + 11.2 0.000 Intergenic Intergenic -6300 NM_001303451 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr1-10421 chr1 157960504 157960714 + 11.2 0.000 Intergenic Intergenic -32664 NM_001286349 55243 Hs.272234 NM_018240 ENSG00000183853 KIRREL1 KIRREL|NEPH1 kirre like nephrin family adhesion molecule 1 protein-coding chr1-3438 chr1 16989788 16989998 + 11.2 0.000 exon (NM_001141973, exon 22 of 29) exon (NM_001141973, exon 22 of 29) -8307 NM_017459 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr22-2292 chr22 36547069 36547279 + 11.2 0.000 Intergenic Intergenic -18008 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr20-1056 chr20 7248749 7248959 + 11.2 0.000 intron (NR_110609, intron 2 of 7) intron (NR_110609, intron 2 of 7) 5348 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA chr14-2251 chr14 105428366 105428576 + 11.2 0.000 intron (NM_001203258, intron 1 of 20) AluJb|SINE|Alu 8644 NM_001203258 9112 Hs.525629 NM_004689 ENSG00000182979 MTA1 - metastasis associated 1 protein-coding chr12-2300 chr12 120498017 120498227 + 11.2 0.000 exon (NM_003746, exon 3 of 3) exon (NM_003746, exon 3 of 3) 2009 NM_001037495 8655 Hs.5120 NM_003746 ENSG00000088986 DYNLL1 DLC1|DLC8|DNCL1|DNCLC1|LC8|LC8a|PIN|hdlc1 dynein light chain LC8-type 1 protein-coding chr12-5131 chr12 98737368 98737578 + 11.2 0.000 intron (NM_001204081, intron 9 of 9) L2b|LINE|L2 92173 NM_181869 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr2-3632 chr2 130873644 130873854 + 11.2 0.000 intron (NM_001367493, intron 1 of 13) intron (NM_001367493, intron 1 of 13) 36835 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr21-355 chr21 44843551 44843761 + 11.2 0.000 Intergenic Intergenic -25527 NM_001286416 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr6-4053 chr6 133574293 133574503 + 11.2 0.000 intron (NR_109982, intron 4 of 8) L1MDa|LINE|L1 -246749 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr11-4749 chr11 101441384 101441594 + 11.2 0.000 Intergenic Intergenic 78416 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr10-2447 chr10 12535185 12535395 + 11.2 0.000 intron (NM_001351032, intron 3 of 11) intron (NM_001351032, intron 3 of 11) -43463 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 - microRNA 4480 ncRNA chr10-4568 chr10 104943840 104944050 + 11.2 0.000 intron (NM_014978, intron 3 of 26) FRAM|SINE|Alu -277729 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr14-5352 chr14 103082220 103082430 + 11.2 0.000 Intergenic Intergenic -1885 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chrX-1068 chrX 132086637 132086847 + 11.2 0.000 intron (NM_194277, intron 5 of 11) MLT1B|LTR|ERVL-MaLR 41278 NM_001306193 90167 Hs.170776 NM_194277 ENSG00000165694 FRMD7 NYS|NYS1|XIPAN FERM domain containing 7 protein-coding chr4-4738 chr4 94305638 94305848 + 11.2 0.000 intron (NM_014485, intron 4 of 5) MIR|SINE|MIR 37093 NM_014485 27306 Hs.128433 NM_014485 ENSG00000163106 HPGDS GSTS|GSTS1|GSTS1-1|PGD2|PGDS hematopoietic prostaglandin D synthase protein-coding chr2-3759 chr2 7847930 7848140 + 11.2 0.000 Intergenic Intergenic 51620 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr3-3092 chr3 137013862 137014072 + 11.2 0.000 Intergenic Intergenic 55984 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr11-2558 chr11 102476272 102476482 + 11.2 0.000 intron (NR_135076, intron 1 of 2) MIR3|SINE|MIR 9122 NR_135076 102723838 Hs.738066 NR_135076 ENSG00000255482 LOC102723838 - uncharacterized LOC102723838 ncRNA chr2-2630 chr2 84905374 84905584 + 11.2 0.000 promoter-TSS (NM_021103) promoter-TSS (NM_021103) -177 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr12-1735 chr12 48454717 48454927 + 11.2 0.000 Intergenic Intergenic -17843 NM_012404 23519 Hs.532658 NM_012404 ENSG00000139223 ANP32D PP32R2 acidic nuclear phosphoprotein 32 family member D protein-coding chr16-2859 chr16 86554069 86554279 + 11.2 0.000 intron (NR_027489, intron 2 of 8) LTR12C|LTR|ERV1 1061 NM_022764 64779 Hs.343627 NM_022764 ENSG00000103248 MTHFSD - methenyltetrahydrofolate synthetase domain containing protein-coding chr1-11686 chr1 5660717 5660927 + 11.2 0.000 Intergenic Intergenic 201919 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr15-1430 chr15 66876280 66876490 + 11.2 0.000 Intergenic Intergenic 80130 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr6-3089 chr6 84114908 84115118 + 11.2 0.000 Intergenic L1PA7|LINE|L1 80894 NM_001346544 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr22-727 chr22 37501731 37501941 + 11.2 0.000 intron (NM_014550, intron 11 of 19) intron (NM_014550, intron 11 of 19) -15449 NM_001166343 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr22-1503 chr22 38766114 38766324 + 11.2 0.000 Intergenic Intergenic -10221 NM_015374 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr16-2810 chr16 67364983 67365193 + 11.2 0.000 intron (NM_018296, intron 6 of 13) intron (NM_018296, intron 6 of 13) 17733 NM_001161575 55282 Hs.125139 NM_018296 ENSG00000159708 LRRC36 RORBP70|XLHSRF2 leucine rich repeat containing 36 protein-coding chr7-2967 chr7 1588539 1588749 + 11.2 0.000 non-coding (NR_021487, exon 6 of 6) non-coding (NR_021487, exon 6 of 6) 18571 NR_027328 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr1-2742 chr1 30704326 30704536 + 11.2 0.000 Intergenic Intergenic -14341 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr22-1135 chr22 42939342 42939552 + 11.2 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 7594 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr6-3574 chr6 68187405 68187615 + 11.2 0.000 Intergenic MER94|DNA|hAT-Blackjack 132159 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr16-3199 chr16 84960865 84961075 + 11.2 0.000 Intergenic L1M5|LINE|L1 50565 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr9-1826 chr9 129703221 129703431 + 11.2 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 15380 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr2-3098 chr2 128184061 128184271 + 11.2 0.000 intron (NR_027671, intron 38 of 40) intron (NR_027671, intron 38 of 40) 92966 NR_027671 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr14-1732 chr14 55249054 55249264 + 11.2 0.000 Intergenic Intergenic -22262 NM_017943 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr11-2978 chr11 92978218 92978428 + 11.2 0.000 intron (NM_005959, intron 1 of 1) intron (NM_005959, intron 1 of 1) 8700 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr1-5826 chr1 225617914 225618124 + 11.2 0.000 intron (NM_001008493, intron 1 of 14) intron (NM_001008493, intron 1 of 14) 35104 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr20-1160 chr20 58342040 58342250 + 11.2 0.000 intron (NM_020673, intron 2 of 6) intron (NM_020673, intron 2 of 6) 32430 NM_020673 57403 Hs.529044 NM_020673 ENSG00000124209 RAB22A - RAB22A, member RAS oncogene family protein-coding chr7-3896 chr7 112157189 112157399 + 11.2 0.000 intron (NM_001363540, intron 1 of 52) AmnSINE1|SINE|5S-Deu-L2 49105 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chrX-2530 chrX 97995547 97995757 + 11.2 0.000 Intergenic Intergenic -431117 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chrX-633 chrX 119375572 119375782 + 11.2 0.000 Intergenic HERV16-int|LTR|ERVL -23659 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr6-2848 chr6 2168459 2168669 + 11.2 0.000 intron (NM_001500, intron 1 of 10) intron (NM_001500, intron 1 of 10) 7427 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chrX-760 chrX 22629449 22629659 + 11.2 0.000 intron (NR_073010, intron 4 of 11) intron (NR_073010, intron 4 of 11) 356641 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr2-5442 chr2 121212407 121212617 + 11.2 0.000 Intergenic MER5A|DNA|hAT-Charlie 72690 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr2-11956 chr2 26521874 26522084 + 11.2 0.000 intron (NM_194248, intron 3 of 46) intron (NM_194248, intron 3 of 46) 36777 NM_001287489 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr6-2639 chr6 158576077 158576287 + 11.2 0.000 intron (NM_020823, intron 2 of 16) L1M4c|LINE|L1 -33525 NR_106981 102465694 NR_106981 ENSG00000278571 MIR7161 hsa-mir-7161 microRNA 7161 ncRNA chr2-5132 chr2 25194524 25194734 + 11.2 0.000 Intergenic Intergenic -9684 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr9-6569 chr9 122677923 122678133 + 11.2 0.000 Intergenic L1MA6|LINE|L1 2898 NM_001005234 26735 Hs.626839 NM_001005234 ENSG00000171481 OR1L3 OR9-28|OR9-D olfactory receptor family 1 subfamily L member 3 protein-coding chr9-2445 chr9 6653746 6653956 + 11.2 0.000 Intergenic ERVL-E-int|LTR|ERVL -8159 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr11-4420 chr11 87325082 87325292 + 11.2 0.000 non-coding (NR_033149, exon 14 of 14) non-coding (NR_033149, exon 14 of 14) 287253 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr15-2655 chr15 74844590 74844800 + 11.2 0.000 3' UTR (NM_005697, exon 9 of 9) 3' UTR (NM_005697, exon 9 of 9) -1539 NR_104309 25989 Hs.513034 NM_001099436 ENSG00000140474 ULK3 - unc-51 like kinase 3 protein-coding chr2-1571 chr2 38106555 38106765 + 11.2 0.000 Intergenic Intergenic -24445 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr7-4659 chr7 33007062 33007272 + 11.2 0.000 TTS (NM_001284341) TTS (NM_001284341) 27693 NM_001284343 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr22-1512 chr22 45400761 45400971 + 11.2 0.000 intron (NM_148674, intron 5 of 24) L1MC3|LINE|L1 12733 NM_148674 27127 Hs.334176 NM_148674 ENSG00000077935 SMC1B SMC1BETA|SMC1L2 structural maintenance of chromosomes 1B protein-coding chr1-5439 chr1 40450887 40451097 + 11.2 0.000 exon (NM_023070, exon 1 of 5) exon (NM_023070, exon 1 of 5) 516 NM_023070 65243 Hs.133034 NM_023070 ENSG00000187801 ZFP69B ZKSCAN23B|ZNF643|ZSCAN54B ZFP69 zinc finger protein B protein-coding chr11-4568 chr11 125517114 125517324 + 11.2 0.000 Intergenic Intergenic -20909 NM_022549 9638 Hs.224008 NM_005103 ENSG00000149557 FEZ1 UNC-76 fasciculation and elongation protein zeta 1 protein-coding chr11-4376 chr11 75431059 75431269 + 11.2 0.000 promoter-TSS (NM_001039548) promoter-TSS (NM_001039548) -535 NM_001039548 283212 Hs.292451 NM_173583 ENSG00000149243 KLHL35 - kelch like family member 35 protein-coding chr20-1590 chr20 4450361 4450571 + 11.2 0.000 Intergenic Intergenic -201179 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr7-2757 chr7 48402157 48402367 + 11.2 0.000 intron (NM_152701, intron 38 of 61) intron (NM_152701, intron 38 of 61) 230804 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr8-2612 chr8 59620424 59620634 + 11.2 0.000 Intergenic Intergenic 501319 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr11-2500 chr11 67261443 67261653 + 11.2 0.000 Intergenic Intergenic -4925 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr8-607 chr8 144950845 144951055 + 11.2 0.000 promoter-TSS (NM_001029976) promoter-TSS (NM_001029976) -70 NM_006958 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding chr20-1566 chr20 856296 856506 + 11.2 0.000 Intergenic Intergenic 11758 NM_031424 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding chr12-2344 chr12 6058599 6058809 + 11.2 0.000 intron (NM_000552, intron 13 of 51) intron (NM_000552, intron 13 of 51) -18521 NR_145989 109729112 NR_145989 SNORA120 - small nucleolar RNA, H/ACA box 120 snoRNA chr2-3731 chr2 239185348 239185558 + 11.2 0.000 intron (NM_006037, intron 4 of 26) intron (NM_006037, intron 4 of 26) 10004 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr1-3709 chr1 206504130 206504340 + 11.2 0.000 Intergenic Intergenic -3296 NM_182664 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr19-2492 chr19 5671735 5671945 + 11.2 0.000 Intergenic MER54B|LTR|ERVL 8398 NM_001365761 125988 Hs.356626 NM_205767 ENSG00000174917 MICOS13 C19orf70|MIC13|P117|QIL1 mitochondrial contact site and cristae organizing system subunit 13 protein-coding chr1-2588 chr1 45913187 45913397 + 11.2 0.000 intron (NM_001324320, intron 4 of 29) intron (NM_001324320, intron 4 of 29) 48944 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr2-4255 chr2 223577068 223577278 + 11.2 0.000 Intergenic BLACKJACK|DNA|hAT-Blackjack 25188 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr8-2115 chr8 142784439 142784649 + 11.2 0.000 TTS (NM_003695) TTS (NM_003695) 1995 NM_003695 8581 Hs.415762 NM_003695 ENSG00000167656 LY6D E48|Ly-6D lymphocyte antigen 6 family member D protein-coding chr7-1975 chr7 140924189 140924399 + 11.2 0.000 intron (NR_148928, intron 1 of 17) CpG 635 NM_001354609 673 Hs.324250 NM_004333 ENSG00000157764 BRAF B-RAF1|B-raf|BRAF1|NS7|RAFB1 B-Raf proto-oncogene, serine/threonine kinase protein-coding chr11-3320 chr11 110622000 110622210 + 11.2 0.000 intron (NM_020809, intron 5 of 15) L1MEf|LINE|L1 89720 NM_001258415 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr2-1641 chr2 25341835 25342045 + 11.2 0.000 promoter-TSS (NM_022552) promoter-TSS (NM_022552) -15 NM_001320892 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr2-5596 chr2 176938804 176939014 + 11.2 0.000 Intergenic Intergenic 273502 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr7-5245 chr7 17371768 17371978 + 11.2 0.000 Intergenic Intergenic -3044 NR_110014 102659288 Hs.559488 NR_110014 KCCAT333 - renal clear cell carcinoma-associated transcript 333 ncRNA chr20-2470 chr20 32035134 32035344 + 11.2 0.000 Intergenic L2b|LINE|L2 -17003 NM_001172130 3055 Hs.655210 NM_002110 ENSG00000101336 HCK JTK9|p59Hck|p61Hck HCK proto-oncogene, Src family tyrosine kinase protein-coding chr19-3300 chr19 4354263 4354473 + 11.2 0.000 exon (NM_032868, exon 6 of 12) exon (NM_032868, exon 6 of 12) 10841 NM_001159846 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding chr7-3358 chr7 95472953 95473163 + 11.2 0.000 Intergenic Intergenic -12843 NM_145872 51666 Hs.602765 NM_016116 ENSG00000005981 ASB4 ASB-4 ankyrin repeat and SOCS box containing 4 protein-coding chr1-4998 chr1 63877907 63878117 + 11.2 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 103995 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr1-10610 chr1 178005092 178005302 + 11.2 0.000 TTS (NR_037167) TTS (NR_037167) -20894 NM_001356500 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr22-2356 chr22 43539128 43539338 + 11.2 0.000 intron (NM_198856, intron 26 of 29) MLT1D|LTR|ERVL-MaLR 22979 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr22-1974 chr22 50551241 50551451 + 11.2 0.000 TTS (NM_138433) TTS (NM_138433) 5447 NM_138433 113730 Hs.137007 NM_138433 ENSG00000130487 KLHDC7B - kelch domain containing 7B protein-coding chr6-753 chr6 87239283 87239493 + 11.2 0.000 intron (NM_015021, intron 5 of 7) SVA_A|Retroposon|SVA -83200 NM_001287445 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr17-2659 chr17 28405765 28405975 + 11.2 0.000 intron (NM_001242366, intron 1 of 3) CpG 342 NM_001242366 113235 Hs.446689 NM_080669 ENSG00000076351 SLC46A1 G21|HCP1|PCFT solute carrier family 46 member 1 protein-coding chr1-3880 chr1 52751655 52751865 + 11.2 0.000 intron (NM_024646, intron 1 of 13) MER21C|LTR|ERVL 25307 NM_024646 79699 Hs.476280 NM_024646 ENSG00000162378 ZYG11B ZYG11 zyg-11 family member B, cell cycle regulator protein-coding chr7-5293 chr7 24465052 24465262 + 11.2 0.000 Intergenic L2|LINE|L2 -108295 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr15-1434 chr15 68445352 68445562 + 11.2 0.000 Intergenic L1MEg|LINE|L1 -13294 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chrX-444 chrX 77910510 77910720 + 11.2 0.000 promoter-TSS (NR_104109) promoter-TSS (NR_104109) -41 NM_001282224 538 Hs.496414 NM_000052 ENSG00000165240 ATP7A DSMAX|MK|MNK|SMAX3 ATPase copper transporting alpha protein-coding chr19-2465 chr19 2040555 2040765 + 11.2 0.000 intron (NM_199054, intron 12 of 13) intron (NM_199054, intron 12 of 13) 10584 NM_017572 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr2-6973 chr2 127906245 127906455 + 11.2 0.000 Intergenic MER21C|LTR|ERVL -20410 NM_001199140 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr1-6186 chr1 203663393 203663603 + 11.2 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 35561 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr7-3481 chr7 2227330 2227540 + 11.2 0.000 intron (NM_001013837, intron 3 of 18) MER20|DNA|hAT-Charlie 5510 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr2-3744 chr2 1136246 1136456 + 11.2 0.000 intron (NM_018968, intron 4 of 16) intron (NM_018968, intron 4 of 16) -184959 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr10-823 chr10 100009718 100009928 + 11.2 0.000 intron (NM_015221, intron 1 of 16) CpG 124 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr22-1300 chr22 42452138 42452348 + 11.2 0.000 Intergenic AluJb|SINE|Alu -14257 NM_001371362 chr7-3173 chr7 99693362 99693572 + 11.2 0.000 intron (NM_001256497, intron 14 of 14) L1P2|LINE|L1 -13471 NR_033807 1577 Hs.571258 NM_000777 ENSG00000106258 CYP3A5 CP35|CYPIIIA5|P450PCN3|PCN3 cytochrome P450 family 3 subfamily A member 5 protein-coding chr12-2012 chr12 24755072 24755282 + 11.2 0.000 Intergenic Intergenic 147045 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr6-1620 chr6 79005291 79005501 + 11.2 0.000 intron (NM_017934, intron 15 of 39) intron (NM_017934, intron 15 of 39) 72858 NM_017934 55023 Hs.511817 NM_017934 ENSG00000146247 PHIP BRWD2|DCAF14|DIDOD|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding chr5-2872 chr5 85553462 85553672 + 11.2 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -728877 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr2-3669 chr2 176097568 176097778 + 11.2 0.000 Intergenic CpG -2129 NM_021193 3238 Hs.450028 NM_021193 ENSG00000170178 HOXD12 HOX4H homeobox D12 protein-coding chr14-514 chr14 102509773 102509983 + 11.2 0.000 promoter-TSS (NM_001348651) promoter-TSS (NM_001348651) -102 NM_001348652 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr4-4446 chr4 53716160 53716370 + 11.2 0.000 intron (NR_125918, intron 1 of 2) L2a|LINE|L2 20364 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr17-2744 chr17 79099359 79099569 + 11.2 0.000 intron (NM_001082575, intron 9 of 14) LTR90B|LTR|LTR 24527 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr3-3423 chr3 113783472 113783682 + 11.2 0.000 intron (NM_001690, intron 3 of 14) MER119|DNA|hAT-Charlie 36542 NM_001690 523 Hs.477155 NM_001690 ENSG00000114573 ATP6V1A ARCL2D|ATP6A1|ATP6V1A1|HO68|IECEE3|VA68|VPP2|Vma1 ATPase H+ transporting V1 subunit A protein-coding chr3-3686 chr3 157717660 157717870 + 11.2 0.000 Intergenic Intergenic 174421 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr1-1271 chr1 39559554 39559764 + 11.2 0.000 promoter-TSS (NR_003929) promoter-TSS (NR_003929) 39 NR_144357 728448 Hs.472508 NR_003929 ENSG00000243970 PPIEL PPIEP1 peptidylprolyl isomerase E like pseudogene pseudo chr6-3319 chr6 167156804 167157014 + 11.2 0.000 TTS (NM_005299) TTS (NM_005299) 922 NM_005299 2853 Hs.248124 NM_005299 ENSG00000120436 GPR31 12-HETER|HETER|HETER1 G protein-coupled receptor 31 protein-coding chr1-6605 chr1 39231356 39231566 + 11.2 0.000 intron (NM_012090, intron 2 of 92) FLAM_C|SINE|Alu 147294 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr1-4185 chr1 40625032 40625242 + 11.2 0.000 3' UTR (NM_014747, exon 8 of 8) 3' UTR (NM_014747, exon 8 of 8) 40545 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr9-5163 chr9 60542792 60543002 + 11.2 0.000 Intergenic ALR/Alpha|Satellite|centr -371510 NM_001113541 727905 Hs.645497 NM_001113541 ENSG00000276581 SPATA31A5 FAM75A5 SPATA31 subfamily A member 5 protein-coding chr5-2684 chr5 55725651 55725861 + 11.2 0.000 Intergenic AluJr|SINE|Alu -12261 NM_001142549 54514 Hs.223581 NM_019039 ENSG00000152670 DDX4 VASA DEAD-box helicase 4 protein-coding chr5-1086 chr5 64210853 64211063 + 11.2 0.000 intron (NM_001113561, intron 2 of 7) LTR26|LTR|ERV1 45115 NM_001113561 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr1-13238 chr1 218680407 218680617 + 11.2 0.000 intron (NR_031644, intron 3 of 6) L2b|LINE|L2 170417 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr4-3401 chr4 43590620 43590830 + 11.2 0.000 Intergenic Intergenic -98182 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr15-3858 chr15 89361703 89361913 + 11.2 0.000 promoter-TSS (NR_133002) promoter-TSS (NR_133002) 229 NR_133001 254559 Hs.136313 NR_015411 ENSG00000255571 MIR9-3HG LINC00925 MIR9-3 host gene ncRNA chr17-3788 chr17 39235713 39235923 + 11.2 0.000 Intergenic Intergenic -9873 NM_198993 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr16-4741 chr16 84468587 84468797 + 11.2 0.000 Intergenic Intergenic -1331 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr2-3159 chr2 197269237 197269447 + 11.2 0.000 intron (NR_046837, intron 5 of 5) intron (NR_046837, intron 5 of 5) 33177 NR_046837 101927547 Hs.687027 NR_046837 ENSG00000236977 ANKRD44-IT1 - ANKRD44 intronic transcript 1 ncRNA chr17-2721 chr17 70021853 70022063 + 11.2 0.000 Intergenic Intergenic -29313 NR_104130 101928141 Hs.639899 NR_104129 ENSG00000267603 LINC01028 TCONS_00025127 long intergenic non-protein coding RNA 1028 ncRNA chr17-2945 chr17 58583787 58583997 + 11.2 0.000 intron (NM_198393, intron 19 of 32) intron (NM_198393, intron 19 of 32) -39564 NM_001038704 5414 Hs.287518 NM_004574 ENSG00000108387 SEPTIN4 ARTS|BRADEION|C17orf47|CE5B3|H5|MART|PNUTL2|SEP4|SEPT4|hCDCREL-2|hucep-7 septin 4 protein-coding chr1-9221 chr1 22631830 22632040 + 11.2 0.000 Intergenic LTR37B|LTR|ERV1 1431 NR_106742 102466615 NR_106742 ENSG00000276835 MIR6127 hsa-mir-6127 microRNA 6127 ncRNA chr10-2409 chr10 126049821 126050031 + 11.2 0.000 intron (NM_001288974, intron 14 of 18) intron (NM_001288974, intron 14 of 18) -76653 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr19-5086 chr19 55085481 55085691 + 11.2 0.000 intron (NM_017729, intron 9 of 14) MIR|SINE|MIR 5194 NM_017729 54869 Hs.438862 NM_017729 ENSG00000131037 EPS8L1 DRC3|EPS8R1|PP10566 EPS8 like 1 protein-coding chr19-6965 chr19 47845009 47845219 + 11.2 0.000 Intergenic MIRb|SINE|MIR 23177 NM_000554 1406 Hs.617342 NM_000554 ENSG00000105392 CRX CORD2|CRD|LCA7|OTX3 cone-rod homeobox protein-coding chr1-4489 chr1 20259623 20259833 + 11.2 0.000 Intergenic Intergenic 16633 NR_147205 105376827 Hs.559701 NR_147205 ENSG00000228105 LINC01757 - long intergenic non-protein coding RNA 1757 ncRNA chr7-2982 chr7 6166602 6166812 + 11.2 0.000 intron (NM_001367581, intron 10 of 13) intron (NM_001367581, intron 10 of 13) 5430 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr14-1312 chr14 54638074 54638284 + 11.2 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 70567 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr21-1827 chr21 40653721 40653931 + 11.2 0.000 intron (NR_073202, intron 3 of 32) AluSx1|SINE|Alu -23059 NR_046774 100874326 Hs.679746 NR_046774 ENSG00000233756 DSCAM-IT1 zag4 DSCAM intronic transcript 1 ncRNA chr18-1681 chr18 75199290 75199500 + 11.2 0.000 3' UTR (NM_175907, exon 2 of 2) 3' UTR (NM_175907, exon 2 of 2) 6118 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr8-5398 chr8 27015567 27015777 + 11.2 0.000 Intergenic Intergenic 33291 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA chr13-1390 chr13 113095394 113095604 + 11.2 0.000 intron (NM_001366646, intron 25 of 27) intron (NM_001366646, intron 25 of 27) -10289 NM_000131 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr15-2331 chr15 95988587 95988797 + 11.2 0.000 Intergenic Intergenic 139149 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr4-1145 chr4 54233131 54233341 + 11.2 0.000 promoter-TSS (NM_001347830) promoter-TSS (NM_001347830) 136 NM_001347829 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chr1-5715 chr1 66035716 66035926 + 11.2 0.000 intron (NM_001037340, intron 1 of 14) L1MA6|LINE|L1 14897 NR_123718 101927139 Hs.127908 NR_123718 ENSG00000227466 LOC101927139 - uncharacterized LOC101927139 ncRNA chr21-656 chr21 38631333 38631543 + 11.2 0.000 intron (NM_001243432, intron 1 of 11) intron (NM_001243432, intron 1 of 11) 29229 NM_001243428 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr6-3668 chr6 148501309 148501519 + 11.2 0.000 intron (NM_001346506, intron 9 of 20) intron (NM_001346506, intron 9 of 20) -7085 NM_001346507 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr10-4322 chr10 22759958 22760168 + 11.2 0.000 Intergenic Intergenic -45485 NM_005028 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr17-4026 chr17 76157784 76157994 + 11.2 0.000 intron (NM_052916, intron 13 of 18) intron (NM_052916, intron 13 of 18) -16644 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr19-1717 chr19 46697617 46697827 + 11.2 0.000 intron (NM_016457, intron 8 of 17) CpG 11632 NR_036157 100422913 NR_036157 ENSG00000211513 MIR320E mir-320e microRNA 320e ncRNA chr12-2854 chr12 5512673 5512883 + 11.2 0.000 Intergenic L2b|LINE|L2 18646 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr18-956 chr18 28123657 28123867 + 11.2 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) 53368 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr10-2235 chr10 79981511 79981721 + 11.2 0.000 Intergenic CpG -32511 NM_003019 6441 Hs.253495 NM_003019 ENSG00000133661 SFTPD COLEC7|PSP-D|SFTP4|SP-D surfactant protein D protein-coding chr17-1599 chr17 64774491 64774701 + 11.2 0.000 intron (NR_026899, intron 3 of 12) intron (NR_026899, intron 3 of 12) -6163 NR_106728 102464831 NR_106728 ENSG00000278581 MIR6080 hsa-mir-6080 microRNA 6080 ncRNA chr19-1142 chr19 18870102 18870312 + 11.2 0.000 exon (NM_001492, exon 7 of 8) exon (NM_001492, exon 7 of 8) 25951 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr17-3831 chr17 42847060 42847270 + 11.2 0.000 intron (NM_009590, intron 1 of 3) intron (NM_009590, intron 1 of 3) 2585 NM_001158 314 Hs.143102 NM_001158 ENSG00000131480 AOC2 DAO2|RAO|SSAO amine oxidase copper containing 2 protein-coding chr1-2963 chr1 115426424 115426634 + 11.2 0.000 Intergenic Intergenic -88293 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr8-1289 chr8 42541987 42542197 + 11.2 0.000 promoter-TSS (NM_001257181) promoter-TSS (NM_001257181) -138 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr2-5018 chr2 230953388 230953598 + 11.2 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -28251 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr2-6432 chr2 149908852 149909062 + 11.2 0.000 Intergenic Intergenic -49766 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr2-3708 chr2 222208731 222208941 + 11.2 0.000 intron (NM_181457, intron 7 of 7) intron (NM_181457, intron 7 of 7) -89311 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr2-4432 chr2 165114355 165114565 + 11.2 0.000 intron (NM_006922, intron 19 of 27) intron (NM_006922, intron 19 of 27) 89590 NM_006922 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr6-2507 chr6 138973761 138973971 + 11.2 0.000 intron (NM_031922, intron 1 of 19) intron (NM_031922, intron 1 of 19) 14395 NM_031922 85021 Hs.334603 NM_031922 ENSG00000135597 REPS1 NBIA7|RALBP1 RALBP1 associated Eps domain containing 1 protein-coding chr6-2201 chr6 38517117 38517327 + 11.2 0.000 intron (NM_001172418, intron 5 of 10) intron (NM_001172418, intron 5 of 10) 35626 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr8-2040 chr8 110083885 110084095 + 11.2 0.000 Intergenic MER52A|LTR|ERV1 -108219 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr13-794 chr13 98710828 98711038 + 11.2 0.000 intron (NM_005073, intron 11 of 22) intron (NM_005073, intron 11 of 22) 41739 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr5-4495 chr5 10471697 10471907 + 11.2 0.000 Intergenic LTR33|LTR|ERVL -6235 NR_106747 102465138 NR_106747 ENSG00000277073 MIR6131 hsa-mir-6131 microRNA 6131 ncRNA chr17-2796 chr17 6575358 6575568 + 11.2 0.000 Intergenic Intergenic -18908 NM_031220 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr10-2756 chr10 122183239 122183449 + 11.2 0.000 intron (NM_001291878, intron 1 of 16) intron (NM_001291878, intron 1 of 16) 19714 NM_006997 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr6-4626 chr6 46732114 46732324 + 11.2 0.000 intron (NM_001168357, intron 1 of 11) L2b|LINE|L2 3156 NM_005084 7941 Hs.584823 NM_005084 ENSG00000146070 PLA2G7 LDL-PLA2|LP-PLA2|PAFAD|PAFAH phospholipase A2 group VII protein-coding chr18-876 chr18 43787674 43787884 + 11.2 0.000 Intergenic MLT2A2|LTR|ERVL -510289 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr3-3142 chr3 160418822 160419032 + 11.2 0.000 intron (NM_001002800, intron 11 of 23) intron (NM_001002800, intron 11 of 23) 14182 NR_029525 406951 NR_029525 ENSG00000198987 MIR16-2 MIRN16-2|mir-16-2|mir-16-3 microRNA 16-2 ncRNA chr19-2570 chr19 884947 885157 + 11.2 0.000 intron (NM_005481, intron 5 of 15) intron (NM_005481, intron 5 of 15) 8135 NM_005481 10025 Hs.365207 NM_005481 ENSG00000175221 MED16 DRIP92|THRAP5|TRAP95 mediator complex subunit 16 protein-coding chr5-2061 chr5 132782142 132782352 + 11.2 0.000 Intergenic Intergenic -4378 NM_001098813 23176 Hs.522057 NM_015146 ENSG00000164402 SEPTIN8 SEP2|SEPT8 septin 8 protein-coding chr2-5729 chr2 217026051 217026261 + 11.2 0.000 Intergenic LTR33|LTR|ERVL 155384 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr15-1362 chr15 73473451 73473661 + 11.2 0.000 intron (NM_001042367, intron 1 of 5) MIRc|SINE|MIR 30392 NM_001348772 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chr12-2762 chr12 51012988 51013198 + 11.2 0.000 intron (NM_001174125, intron 1 of 15) intron (NM_001174125, intron 1 of 15) -3878 NM_001174130 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr7-2969 chr7 1744615 1744825 + 11.2 0.000 exon (NM_001128636, exon 3 of 3) exon (NM_001128636, exon 3 of 3) -2410 NR_120508 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr21-903 chr21 19913318 19913528 + 11.2 0.000 Intergenic Ricksha|DNA|MULE-MuDR -13668 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr3-6345 chr3 82092102 82092312 + 11.2 0.000 intron (NR_147146, intron 1 of 8) L1M5|LINE|L1 106065 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr6-2556 chr6 37863064 37863274 + 11.2 0.000 intron (NM_021943, intron 1 of 5) intron (NM_021943, intron 1 of 5) 43442 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr11-3491 chr11 108593830 108594040 + 11.2 0.000 promoter-TSS (NM_001308019) promoter-TSS (NM_001308019) -167 NM_001308019 23086 Hs.28540 NM_015065 ENSG00000110723 EXPH5 SLAC2-B|SLAC2B exophilin 5 protein-coding chr10-2805 chr10 535012 535222 + 11.2 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -93447 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr5-2096 chr5 14298551 14298761 + 11.2 0.000 intron (NM_007118, intron 7 of 56) intron (NM_007118, intron 7 of 56) 155314 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr1-7948 chr1 179387825 179388035 + 11.2 0.000 intron (NR_073544, intron 9 of 25) L1MEc|LINE|L1 21886 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr7-2876 chr7 121582226 121582436 + 11.2 0.000 Intergenic Intergenic -185963 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr6-3702 chr6 166139403 166139613 + 11.2 0.000 Intergenic L1PB1|LINE|L1 28343 NM_001366285 6862 Hs.389457 NM_003181 ENSG00000164458 TBXT SAVA|T|TFT T-box transcription factor T protein-coding chr2-7039 chr2 156325899 156326109 + 11.2 0.000 intron (NM_173173, intron 7 of 7) intron (NM_173173, intron 7 of 7) 6717 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chrX-3389 chrX 155144799 155145009 + 11.2 0.000 Intergenic Intergenic -52103 NM_001303544 7411 Hs.436803 NM_003372 ENSG00000155959 VBP1 HIBBJ46|PFD3|PFDN3|VBP-1 VHL binding protein 1 protein-coding chr19-1288 chr19 55369853 55370063 + 11.2 0.000 intron (NM_000641, intron 1 of 4) CpG 505 NM_000641 3589 Hs.467304 NM_000641 ENSG00000095752 IL11 AGIF|IL-11 interleukin 11 protein-coding chr15-1697 chr15 64701341 64701551 + 11.2 0.000 intron (NM_002537, intron 1 of 4) intron (NM_002537, intron 1 of 4) 1835 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr8-2312 chr8 142750711 142750921 + 11.2 0.000 intron (NM_205545, intron 2 of 2) GA-rich|Low_complexity|Low_complexity 1716 NM_205545 137797 Hs.441280 NM_205545 ENSG00000197353 LYPD2 LYPDC2|UNQ430 LY6/PLAUR domain containing 2 protein-coding chr1-12291 chr1 233075176 233075386 + 11.2 0.000 intron (NM_014801, intron 23 of 33) L1MD1|LINE|L1 124439 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chrX-712 chrX 107571721 107571931 + 11.2 0.000 intron (NM_032428, intron 13 of 15) intron (NM_032428, intron 13 of 15) -26005 NR_046750 100874122 Hs.600967 NR_046750 ENSG00000227610 FRMPD3-AS1 - FRMPD3 antisense RNA 1 ncRNA chr11-10098 chr11 86485076 86485286 + 11.2 0.000 intron (NM_001014811, intron 6 of 13) L3|LINE|CR1 110294 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr15-2171 chr15 79481016 79481226 + 11.2 0.000 Intergenic MIRb|SINE|MIR 48605 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chrX-1838 chrX 104843998 104844208 + 11.2 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 277904 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr4-7270 chr4 48402462 48402672 + 11.2 0.000 intron (NM_020846, intron 6 of 7) L1PA10|LINE|L1 61038 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr5-6639 chr5 44089935 44090145 + 11.2 0.000 Intergenic Intergenic -298692 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr5-2477 chr5 142086565 142086775 + 11.2 0.000 Intergenic Intergenic -22109 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr4-4996 chr4 137104218 137104428 + 11.2 0.000 intron (NR_149105, intron 1 of 3) L1MB3|LINE|L1 -89433 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr1-3226 chr1 182956215 182956425 + 11.2 0.000 Intergenic Intergenic -3154 NM_030933 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr22-2830 chr22 43670505 43670715 + 11.2 0.000 intron (NM_198856, intron 13 of 29) intron (NM_198856, intron 13 of 29) 141695 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chrX-326 chrX 40736168 40736378 + 11.2 0.000 promoter-TSS (NM_004229) promoter-TSS (NM_004229) -731 NM_004229 9282 Hs.407604 NM_004229 ENSG00000180182 MED14 CRSP150|CRSP2|CSRP|CXorf4|DRIP150|EXLM1|RGR1|TRAP170 mediator complex subunit 14 protein-coding chr14-3060 chr14 61190357 61190567 + 11.2 0.000 Intergenic L2a|LINE|L2 90876 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr19-3908 chr19 42487204 42487414 + 11.2 0.000 intron (NR_073180, intron 2 of 2) MER41B|LTR|ERV1 41172 NM_001184813 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr7-2798 chr7 82784278 82784488 + 11.2 0.000 intron (NM_033026, intron 22 of 24) L2a|LINE|L2 -340427 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr7-6404 chr7 154638109 154638319 + 11.2 0.000 intron (NR_157196, intron 6 of 25) intron (NR_157196, intron 6 of 25) -290303 NR_024476 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr3-3415 chr3 99270019 99270229 + 11.2 0.000 Intergenic Intergenic -368429 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr9-3121 chr9 77945904 77946114 + 11.2 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 85802 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr2-2363 chr2 218906951 218907161 + 11.2 0.000 intron (NR_110238, intron 3 of 4) intron (NR_110238, intron 3 of 4) 23581 NR_110238 101928537 Hs.611129 NR_110238 ENSG00000228135 LINC01494 - long intergenic non-protein coding RNA 1494 ncRNA chr11-1325 chr11 96113451 96113661 + 11.2 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -189349 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chrX-418 chrX 15269640 15269850 + 11.2 0.000 intron (NM_001031739, intron 1 of 6) intron (NM_001031739, intron 1 of 6) 338 NM_001031739 140462 Hs.19404 NM_024087 ENSG00000102048 ASB9 - ankyrin repeat and SOCS box containing 9 protein-coding chr4-977 chr4 77158004 77158214 + 11.2 0.000 intron (NM_004354, intron 1 of 7) CpG 902 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chrX-249 chrX 119573793 119574003 + 11.2 0.000 promoter-TSS (NM_001282161) promoter-TSS (NM_001282161) -665 NM_001282161 7319 Hs.379466 NM_003336 ENSG00000077721 UBE2A HHR6A|MRXS30|MRXSN|RAD6A|UBC2 ubiquitin conjugating enzyme E2 A protein-coding chr22-760 chr22 36145201 36145411 + 11.2 0.000 intron (NM_145639, intron 3 of 3) intron (NM_145639, intron 3 of 3) 15449 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr2-6865 chr2 74836126 74836336 + 11.2 0.000 intron (NM_000189, intron 1 of 17) intron (NM_000189, intron 1 of 17) 3576 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr14-1446 chr14 92586132 92586342 + 11.2 0.000 intron (NM_024832, intron 3 of 9) intron (NM_024832, intron 3 of 9) 10003 NM_001319987 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr15-1411 chr15 48855516 48855726 + 11.2 0.000 intron (NM_203349, intron 8 of 11) intron (NM_203349, intron 8 of 11) -22513 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chr2-4141 chr2 170873212 170873422 + 11.2 0.000 Intergenic Intergenic -55160 NM_001201428 26003 Hs.431317 NM_015530 ENSG00000115806 GORASP2 GOLPH6|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding chr12-6811 chr12 12016895 12017105 + 11.2 0.000 Intergenic Intergenic -32861 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr3-4227 chr3 136570213 136570423 + 11.2 0.000 intron (NM_005862, intron 4 of 33) L1ME3|LINE|L1 182060 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr12-4655 chr12 46013723 46013933 + 11.2 0.000 Intergenic L1PB2|LINE|L1 -23254 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr14-2707 chr14 88563866 88564076 + 11.2 0.000 intron (NM_001326314, intron 2 of 14) intron (NM_001326314, intron 2 of 14) 624 NM_207661 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr16-1741 chr16 74708118 74708328 + 11.2 0.000 Intergenic Intergenic -7361 NM_001142497 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr14-1859 chr14 71590782 71590992 + 11.2 0.000 intron (NM_001354286, intron 6 of 24) MER20|DNA|hAT-Charlie 4589 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr19-4574 chr19 11123418 11123628 + 11.2 0.000 intron (NM_001195803, intron 13 of 15) MIR|SINE|MIR 10049 NR_106946 102465534 NR_106946 ENSG00000284553 MIR6886 hsa-mir-6886 microRNA 6886 ncRNA chr6-4137 chr6 166360254 166360464 + 11.2 0.000 Intergenic LTR82A|LTR|ERVL 17728 NR_040022 100289495 NR_040022 LOC100289495 - uncharacterized LOC100289495 ncRNA chr17-1958 chr17 939918 940128 + 11.2 0.000 intron (NM_022463, intron 1 of 7) AluJr|SINE|Alu 30391 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr1-10148 chr1 107422418 107422628 + 11.2 0.000 intron (NM_001113228, intron 6 of 6) intron (NM_001113228, intron 6 of 6) 265976 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr17-4728 chr17 34591870 34592080 + 11.2 0.000 intron (NM_001304438, intron 1 of 8) intron (NM_001304438, intron 1 of 8) 11226 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr11-2504 chr11 67659535 67659745 + 11.2 0.000 Intergenic LTR13|LTR|ERVK -8910 NM_080658 91703 Hs.126265 NM_080658 ENSG00000132744 ACY3 ACY-3|HCBP1 aminoacylase 3 protein-coding chr15-2004 chr15 44075690 44075900 + 11.2 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) 118651 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr7-2682 chr7 17369803 17370013 + 11.2 0.000 Intergenic Intergenic -5009 NR_110014 102659288 Hs.559488 NR_110014 KCCAT333 - renal clear cell carcinoma-associated transcript 333 ncRNA chr9-5011 chr9 25462409 25462619 + 11.2 0.000 Intergenic Intergenic 216344 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr2-3366 chr2 241674971 241675181 + 11.2 0.000 TTS (NR_135492) TTS (NR_135492) 11739 NM_012145 1841 Hs.471873 NM_012145 ENSG00000168393 DTYMK CDC8|PP3731|TMPK|TYMK deoxythymidylate kinase protein-coding chr3-1984 chr3 149971120 149971330 + 11.2 0.000 promoter-TSS (NM_002628) promoter-TSS (NM_002628) -54 NR_036538 646903 Hs.632559 NR_036538 LOC646903 - uncharacterized LOC646903 ncRNA chr7-3863 chr7 102978145 102978355 + 11.2 0.000 intron (NM_001085386, intron 2 of 2) HERVH48-int|LTR|ERV1 4820 NM_001085386 58160 Hs.621233 NM_001085386 ENSG00000230257 NFE4 NF-E4 nuclear factor, erythroid 4 protein-coding chr10-3714 chr10 112587815 112588025 + 11.2 0.000 intron (NM_001365712, intron 6 of 8) intron (NM_001365712, intron 6 of 8) -46250 NR_036177 100422909 NR_036177 ENSG00000264763 MIR4295 - microRNA 4295 ncRNA chr5-4473 chr5 8139507 8139717 + 11.2 0.000 Intergenic Intergenic 270464 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr9-3264 chr9 26856540 26856750 + 11.2 0.000 intron (NM_001167575, intron 5 of 5) L3|LINE|CR1 36157 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr12-3601 chr12 52681320 52681530 + 11.2 0.000 Intergenic MIR|SINE|MIR -1018 NM_006121 3848 Hs.80828 NM_006121 ENSG00000167768 KRT1 CK1|EHK|EHK1|EPPK|K1|KRT1A|NEPPK keratin 1 protein-coding chr5-2332 chr5 66401358 66401568 + 11.2 0.000 Intergenic L1PA7|LINE|L1 110141 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr12-3100 chr12 20535978 20536188 + 11.2 0.000 intron (NM_000921, intron 1 of 15) intron (NM_000921, intron 1 of 15) -35781 NM_001244683 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr7-3483 chr7 2274241 2274451 + 11.2 0.000 intron (NM_013321, intron 3 of 10) intron (NM_013321, intron 3 of 10) -16769 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr11-5543 chr11 94938682 94938892 + 11.2 0.000 Intergenic Intergenic 34769 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr15-1041 chr15 101295443 101295653 + 11.2 0.000 promoter-TSS (NR_135506) promoter-TSS (NR_135506) -300 NR_135508 6627 Hs.528763 NM_003090 ENSG00000131876 SNRPA1 Lea1|U2A' small nuclear ribonucleoprotein polypeptide A' protein-coding chr12-5550 chr12 440191 440401 + 11.2 0.000 intron (NM_001130148, intron 8 of 10) intron (NM_001130148, intron 8 of 10) -19643 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr16-2141 chr16 27461833 27462043 + 11.2 0.000 intron (NM_001520, intron 36 of 36) intron (NM_001520, intron 36 of 36) -8545 NR_037158 283888 Hs.660935 NR_037158 ENSG00000259954 IL21R-AS1 - IL21R antisense RNA 1 ncRNA chr12-2917 chr12 57037156 57037366 + 11.2 0.000 intron (NM_005379, intron 19 of 27) L2a|LINE|L2 12868 NM_005379 4640 Hs.5394 NM_005379 ENSG00000166866 MYO1A BBMI|DFNA48|MIHC|MYHL myosin IA protein-coding chr5-2680 chr5 52809942 52810152 + 11.2 0.000 intron (NM_181501, intron 1 of 28) intron (NM_181501, intron 1 of 28) 22131 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr14-1692 chr14 99509764 99509974 + 11.2 0.000 3' UTR (NM_001144995, exon 6 of 6) 3' UTR (NM_001144995, exon 6 of 6) 28460 NM_001099402 8812 Hs.510409 NM_003858 ENSG00000090061 CCNK CPR4|IDDHDF cyclin K protein-coding chr14-2007 chr14 56100561 56100771 + 11.2 0.000 Intergenic Intergenic -17745 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr15-3424 chr15 90214617 90214827 + 11.2 0.000 intron (NM_198925, intron 1 of 13) L4_B_Mam|LINE|RTE-X 13392 NM_198925 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr4-2409 chr4 89276511 89276721 + 11.2 0.000 intron (NM_198281, intron 1 of 1) intron (NM_198281, intron 1 of 1) 31184 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr1-3617 chr1 39142187 39142397 + 11.2 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 58125 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr19-4664 chr19 16702139 16702349 + 11.2 0.000 Intergenic Intergenic -17603 NM_001290355 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr22-1359 chr22 28799202 28799412 + 11.2 0.000 intron (NM_005080, intron 1 of 4) intron (NM_005080, intron 1 of 4) 1265 NM_001079539 7494 Hs.437638 NM_005080 ENSG00000100219 XBP1 TREB-5|TREB5|XBP-1|XBP2 X-box binding protein 1 protein-coding chr2-4848 chr2 85018014 85018224 + 11.2 0.000 intron (NM_020122, intron 1 of 6) intron (NM_020122, intron 1 of 6) 46958 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr14-4696 chr14 57661352 57661562 + 11.2 0.000 intron (NM_001352014, intron 1 of 9) intron (NM_001352014, intron 1 of 9) -167600 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr3-2650 chr3 14923453 14923663 + 11.2 0.000 intron (NM_152536, intron 16 of 19) intron (NM_152536, intron 16 of 19) 23947 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr1-14708 chr1 64345654 64345864 + 11.2 0.000 Intergenic Intergenic -124370 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr5-2971 chr5 175246361 175246571 + 11.2 0.000 Intergenic L2a|LINE|L2 197716 NM_000794 1812 Hs.2624 NM_000794 ENSG00000184845 DRD1 DADR|DRD1A dopamine receptor D1 protein-coding chr5-1328 chr5 134247652 134247862 + 11.2 0.000 Intergenic Intergenic -21684 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr3-1547 chr3 195120101 195120311 + 11.2 0.000 intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) 14374 NR_036089 100422926 NR_036089 ENSG00000265333 MIR3137 - microRNA 3137 ncRNA chr10-2587 chr10 72943377 72943587 + 11.2 0.000 intron (NM_001318124, intron 1 of 3) intron (NM_001318124, intron 1 of 3) 11324 NM_001318124 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chrX-1286 chrX 112687306 112687516 + 11.2 0.000 Intergenic Intergenic -7473 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr11-2118 chr11 130798300 130798510 + 11.2 0.000 Intergenic Intergenic 63705 NR_125383 100507431 Hs.375101 NR_125383 LINC02551 - long intergenic non-protein coding RNA 2551 ncRNA chr1-11641 chr1 246749091 246749301 + 11.2 0.000 intron (NM_016002, intron 5 of 11) HERVIP10F-int|LTR|ERV1 24787 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr10-2988 chr10 86069242 86069452 + 11.2 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 195441 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr10-5206 chr10 61362054 61362264 + 11.2 0.000 Intergenic Intergenic -90480 NR_120643 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr19-2115 chr19 1576955 1577165 + 11.2 0.000 3' UTR (NM_001281453, exon 7 of 7) 3' UTR (NM_001281453, exon 7 of 7) -8735 NM_001174118 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr13-1362 chr13 75669015 75669225 + 11.2 0.000 intron (NM_001306080, intron 1 of 30) L2|LINE|L2 32790 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr17-7091 chr17 68622531 68622741 + 11.2 0.000 Intergenic Intergenic -5518 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr13-1479 chr13 102089156 102089366 + 11.2 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) -43257 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr11-4170 chr11 57312147 57312357 + 11.2 0.000 intron (NM_033396, intron 5 of 11) MIR|SINE|MIR 12700 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr1-3600 chr1 24384390 24384600 + 11.2 0.000 intron (NM_178122, intron 2 of 7) intron (NM_178122, intron 2 of 7) -28992 NM_001322854 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr6-2685 chr6 21026767 21026977 + 11.2 0.000 intron (NM_017774, intron 11 of 15) intron (NM_017774, intron 11 of 15) 485020 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr7-1771 chr7 66700105 66700315 + 11.2 0.000 intron (NM_001367745, intron 1 of 7) intron (NM_001367745, intron 1 of 7) 18044 NM_001287060 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr4-2305 chr4 61688466 61688676 + 11.2 0.000 intron (NM_001371342, intron 4 of 20) intron (NM_001371342, intron 4 of 20) 473194 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr3-5779 chr3 24728141 24728351 + 11.2 0.000 Intergenic Intergenic -101077 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr13-1093 chr13 98415702 98415912 + 11.2 0.000 intron (NM_005766, intron 16 of 26) intron (NM_005766, intron 16 of 26) 106318 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr14-1990 chr14 51660722 51660932 + 11.2 0.000 intron (NM_001267046, intron 1 of 13) L2a|LINE|L2 8917 NM_152330 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr9-3159 chr9 113624910 113625120 + 11.2 0.000 Intergenic Intergenic 30886 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr10-5240 chr10 65341525 65341735 + 11.2 0.000 Intergenic Intergenic -229795 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr20-1272 chr20 45647485 45647695 + 11.2 0.000 TTS (NM_147197) TTS (NM_147197) -16306 NM_147198 259240 Hs.249828 NM_147198 ENSG00000180205 WFDC9 WAP9|dJ688G8.2 WAP four-disulfide core domain 9 protein-coding chr8-4394 chr8 104479112 104479322 + 11.2 0.000 Intergenic Intergenic 5248 NR_030330 693127 NR_030330 ENSG00000208032 MIR548A3 MIRN548A3 microRNA 548a-3 ncRNA chr7-3990 chr7 138208971 138209181 + 11.2 0.000 Intergenic LTR1D1|LTR|ERV1 85318 NR_039678 100616226 NR_039678 ENSG00000284028 MIR4468 - microRNA 4468 ncRNA chr9-6861 chr9 78188458 78188668 + 11.2 0.000 Intergenic Intergenic -47512 NM_001330694 84131 Hs.187621 NM_032171 ENSG00000148019 CEP78 C9orf81|CRDHL|IP63 centrosomal protein 78 protein-coding chr2-3863 chr2 37181777 37181987 + 11.2 0.000 intron (NM_001367551, intron 3 of 6) L3|LINE|CR1 6788 NM_001367551 391365 Hs.631892 NM_001032377 ENSG00000138068 SULT6B1 ST6B1 sulfotransferase family 6B member 1 protein-coding chr3-8207 chr3 45597276 45597486 + 11.2 0.000 intron (NM_014240, intron 1 of 7) intron (NM_014240, intron 1 of 7) 2630 NM_014240 8994 Hs.193370 NM_014240 ENSG00000144791 LIMD1 - LIM domains containing 1 protein-coding chr18-3024 chr18 26544767 26544977 + 11.2 0.000 intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) 3681 NM_001142730 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr1-5037 chr1 85457405 85457615 + 11.2 0.000 intron (NM_001134445, intron 2 of 6) L2c|LINE|L2 7649 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr3-5959 chr3 46483165 46483375 + 11.2 0.000 intron (NM_001321122, intron 1 of 19) MER63C|DNA|hAT-Blackjack 1964 NM_001321122 4057 Hs.529517 NM_002343 ENSG00000012223 LTF GIG12|HEL110|HLF2|LF lactotransferrin protein-coding chr17-6815 chr17 9145997 9146207 + 11.2 0.000 intron (NM_004822, intron 2 of 6) intron (NM_004822, intron 2 of 6) 33016 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr4-8128 chr4 127045352 127045562 + 11.2 0.000 Intergenic Intergenic -587500 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr1-2302 chr1 27868878 27869088 + 11.2 0.000 Intergenic Intergenic -3560 NM_004848 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1|ICB1 thymocyte selection associated family member 2 protein-coding chr6-3576 chr6 68985411 68985621 + 11.2 0.000 intron (NM_001704, intron 10 of 31) MLT1I|LTR|ERVL-MaLR 350234 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr19-3625 chr19 301945 302155 + 11.2 0.000 Intergenic L1MC4|LINE|L1 -10647 NM_177526 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr10-4591 chr10 111516726 111516936 + 11.2 0.000 Intergenic Intergenic 402540 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr22-1930 chr22 46478976 46479186 + 11.2 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 58539 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr4-1599 chr4 27861921 27862131 + 11.2 0.000 Intergenic L1M3f|LINE|L1 644547 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr8-1778 chr8 70172784 70172994 + 11.2 0.000 intron (NM_001321713, intron 4 of 21) intron (NM_001321713, intron 4 of 21) -101637 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr2-3864 chr2 37471897 37472107 + 11.2 0.000 Intergenic ERVL-E-int|LTR|ERVL 127372 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr5-2621 chr5 151480981 151481191 + 11.2 0.000 TTS (NM_001308150) TTS (NM_001308150) 33483 NM_001349740 206358 Hs.269004 NM_078483 ENSG00000123643 SLC36A1 Dct1|LYAAT1|PAT1|TRAMD3 solute carrier family 36 member 1 protein-coding chrX-3310 chrX 116487955 116488165 + 11.2 0.000 Intergenic L1MA9|LINE|L1 -25084 NM_001017978 203413 Hs.97892 NM_001017978 ENSG00000204019 CT83 CXorf61|KK-LC-1|KKLC1 cancer/testis antigen 83 protein-coding chr4-6525 chr4 168337619 168337829 + 11.2 0.000 Intergenic L2a|LINE|L2 -18972 NM_017631 55601 Hs.591710 NM_017631 ENSG00000137628 DDX60 - DExD/H-box helicase 60 protein-coding chr17-3424 chr17 15973194 15973404 + 11.2 0.000 intron (NM_000676, intron 1 of 1) L2a|LINE|L2 26405 NM_001042697 125150 Hs.593985 NM_001042697 ENSG00000214941 ZSWIM7 SWS1 zinc finger SWIM-type containing 7 protein-coding chr1-2822 chr1 33986442 33986652 + 11.2 0.000 intron (NM_052896, intron 3 of 69) MIRb|SINE|MIR 117591 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr14-1442 chr14 89865994 89866204 + 11.2 0.000 intron (NM_001284269, intron 5 of 5) intron (NM_001284269, intron 5 of 5) 88437 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr11-4099 chr11 33816238 33816448 + 11.2 0.000 Intergenic Intergenic 41644 NR_120550 101928440 Hs.202343 NR_120550 ENSG00000254508 FBXO3-DT FBXO3-AS1 FBXO3 divergent transcript ncRNA chr12-2704 chr12 112916452 112916662 + 11.2 0.000 exon (NM_016816, exon 4 of 6) exon (NM_016816, exon 4 of 6) 9595 NM_001320151 4938 Hs.524760 NM_002534 ENSG00000089127 OAS1 E18/E16|IFI-4|OIAS|OIASI 2'-5'-oligoadenylate synthetase 1 protein-coding chr10-4553 chr10 100803944 100804154 + 11.2 0.000 intron (NM_003990, intron 6 of 10) intron (NM_003990, intron 6 of 10) 58338 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr2-2393 chr2 11754224 11754434 + 11.2 0.000 intron (NM_001349205, intron 1 of 21) intron (NM_001349205, intron 1 of 21) 5796 NM_001349205 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr3-3233 chr3 28342505 28342715 + 11.2 0.000 intron (NM_001271650, intron 1 of 8) intron (NM_001271650, intron 1 of 8) -6111 NM_001040432 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding chr7-2337 chr7 665398 665608 + 11.2 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 47021 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chrX-848 chrX 124064058 124064268 + 11.2 0.000 intron (NM_006603, intron 19 of 32) intron (NM_006603, intron 19 of 32) 102457 NM_001042751 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr17-2560 chr17 50173598 50173808 + 11.2 0.000 intron (NR_135553, intron 7 of 8) intron (NR_135553, intron 7 of 8) -1227 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr11-3678 chr11 134614911 134615121 + 11.2 0.000 Intergenic Intergenic -120929 NR_147836 729305 Hs.148365 NR_147836 ENSG00000251226 LINC02714 - long intergenic non-protein coding RNA 2714 ncRNA chr15-4677 chr15 65163403 65163613 + 11.2 0.000 intron (NM_006660, intron 5 of 13) intron (NM_006660, intron 5 of 13) 21834 NR_133680 10845 Hs.113823 NM_006660 ENSG00000166855 CLPX EPP2 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding chr16-3073 chr16 61080231 61080441 + 11.2 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -24570 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr8-2014 chr8 101252235 101252445 + 11.2 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -46276 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr3-2739 chr3 129836852 129837062 + 11.2 0.000 intron (NM_001128224, intron 1 of 5) intron (NM_001128224, intron 1 of 5) -42345 NM_001349273 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr22-1488 chr22 32119911 32120121 + 11.2 0.000 Intergenic Intergenic -1961 NR_040114 23782 Hs.581098 NR_040114 ENSG00000234479 AP1B1P1 ADTB1L1|dJ127L4.2 AP1B1 pseudogene 1 pseudo chr7-1425 chr7 39073552 39073762 + 11.2 0.000 intron (NM_007252, intron 2 of 10) intron (NM_007252, intron 2 of 10) -60090 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr22-937 chr22 45577953 45578163 + 11.2 0.000 intron (NM_006486, intron 16 of 16) MIR3|SINE|MIR 27589 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr22-897 chr22 20564289 20564499 + 11.2 0.000 intron (NM_001003891, intron 5 of 17) intron (NM_001003891, intron 5 of 17) 56347 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr12-3977 chr12 15781065 15781275 + 11.2 0.000 intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 8218 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr15-2194 chr15 89312223 89312433 + 11.2 0.000 intron (NM_001113378, intron 34 of 37) intron (NM_001113378, intron 34 of 37) 14482 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr12-2923 chr12 67650561 67650771 + 11.2 0.000 intron (NM_006482, intron 2 of 2) intron (NM_006482, intron 2 of 2) 1921 NM_003583 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr2-5326 chr2 81295396 81295606 + 11.2 0.000 Intergenic Intergenic 171445 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr10-3444 chr10 47137560 47137770 + 11.2 0.000 Intergenic Intergenic -162532 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr10-6043 chr10 127349773 127349983 + 11.2 0.000 intron (NM_001290223, intron 31 of 51) MLT1C|LTR|ERVL-MaLR -153287 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr6-2126 chr6 2909061 2909271 + 11.2 0.000 Intergenic LTR5_Hs|LTR|ERVK -5857 NM_004155 5272 Hs.104879 NM_004155 ENSG00000170542 SERPINB9 CAP-3|CAP3|PI-9|PI9 serpin family B member 9 protein-coding chr3-2565 chr3 101066010 101066220 + 11.2 0.000 Intergenic Intergenic -72625 NM_001349330 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr20-1161 chr20 59100251 59100461 + 11.2 0.000 Intergenic L1PA13|LINE|L1 -57510 NR_037929 100533975 Hs.656865 NR_037929 SLMO2-ATP5E - SLMO2-ATP5E readthrough ncRNA chr13-1656 chr13 70513290 70513500 + 11.2 0.000 Intergenic Intergenic -404902 NM_001286725 57626 Hs.508201 NM_020866 ENSG00000150361 KLHL1 MRP2 kelch like family member 1 protein-coding chr2-6563 chr2 219795065 219795275 + 11.2 0.000 Intergenic Intergenic 109719 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr12-1857 chr12 49092184 49092394 + 11.2 0.000 intron (NM_021044, intron 1 of 2) intron (NM_021044, intron 1 of 2) 2512 NM_021044 50846 Hs.524382 NM_021044 ENSG00000139549 DHH GDXYM|HHG-3|SRXY7 desert hedgehog signaling molecule protein-coding chr10-2398 chr10 120833395 120833605 + 11.2 0.000 intron (NR_033850, intron 1 of 2) intron (NR_033850, intron 1 of 2) 17679 NR_033850 283089 Hs.568750 NR_033850 ENSG00000227165 WDR11-AS1 - WDR11 antisense RNA 1 ncRNA chr3-3591 chr3 61784282 61784492 + 11.2 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 222816 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr16-2605 chr16 985020 985230 + 11.2 0.000 exon (NM_014587, exon 3 of 3) exon (NM_014587, exon 3 of 3) 3355 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr5-4061 chr5 54993432 54993642 + 11.2 0.000 Intergenic Intergenic -7944 NM_007036 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr1-6809 chr1 90133759 90133969 + 11.2 0.000 Intergenic MIR|SINE|MIR 138754 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr8-1384 chr8 22164615 22164825 + 11.2 0.000 promoter-TSS (NM_001199) promoter-TSS (NM_001199) -652 NR_033404 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr1-4326 chr1 46084644 46084854 + 11.2 0.000 intron (NM_001303427, intron 1 of 9) intron (NM_001303427, intron 1 of 9) 45924 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr2-2571 chr2 227370739 227370949 + 11.2 0.000 intron (NM_024795, intron 2 of 3) intron (NM_024795, intron 2 of 3) 8462 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr8-1773 chr8 65258618 65258828 + 11.2 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -78383 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA chr3-2053 chr3 143182928 143183138 + 11.2 0.000 Intergenic AluJb|SINE|Alu 63262 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr19-3982 chr19 1342760 1342970 + 11.2 0.000 Intergenic AluSq2|SINE|Alu -12094 NM_032853 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr14-1952 chr14 32469083 32469293 + 11.2 0.000 intron (NM_004274, intron 2 of 13) intron (NM_004274, intron 2 of 13) 139890 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr4-2371 chr4 7218803 7219013 + 11.2 0.000 intron (NM_020777, intron 1 of 26) L2|LINE|L2 26370 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr8-576 chr8 118119994 118120204 + 11.2 0.000 Intergenic L2a|LINE|L2 -8280 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr6-2004 chr6 24566003 24566213 + 11.2 0.000 intron (NM_001350410, intron 15 of 21) intron (NM_001350410, intron 15 of 21) 17119 NM_001252328 9856 Hs.26441 NM_014809 ENSG00000137261 KIAA0319 AAVR|DYLX2|DYX2|NMIG KIAA0319 protein-coding chr1-3155 chr1 70779726 70779936 + 11.2 0.000 intron (NR_125938, intron 6 of 6) intron (NR_125938, intron 6 of 6) 73378 NR_125938 101927244 Hs.568660 NR_125938 ENSG00000229051 LINC01788 - long intergenic non-protein coding RNA 1788 ncRNA chr16-2318 chr16 27245269 27245479 + 11.2 0.000 intron (NM_145080, intron 2 of 7) intron (NM_145080, intron 2 of 7) -22831 NR_037184 400512 Hs.434412 NR_037184 ENSG00000245888 NSMCE1-DT - NSMCE1 divergent transcript ncRNA chrX-548 chrX 10755766 10755976 + 11.2 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) 77812 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr12-2618 chr12 124358275 124358485 + 11.2 0.000 intron (NM_001077261, intron 23 of 47) intron (NM_001077261, intron 23 of 47) -21138 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr12-5513 chr12 130803808 130804018 + 11.2 0.000 intron (NM_001351051, intron 7 of 10) MER46C|DNA|TcMar-Tigger 35337 NM_001351050 2054 Hs.437585 NM_001980 ENSG00000111450 STX2 EPIM|EPM|STX2A|STX2B|STX2C syntaxin 2 protein-coding chr4-1933 chr4 94878042 94878252 + 11.2 0.000 intron (NM_001203, intron 2 of 12) L1M5|LINE|L1 -118085 NM_001256792 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr3-3078 chr3 134268356 134268566 + 11.2 0.000 Intergenic (CCT)n|Simple_repeat|Simple_repeat -17717 NM_002958 6259 Hs.654562 NM_002958 ENSG00000163785 RYK D3S3195|JTK5|JTK5A|RYK1 receptor like tyrosine kinase protein-coding chr1-14064 chr1 28943747 28943957 + 11.2 0.000 intron (NM_001166006, intron 1 of 14) L1MA1|LINE|L1 29276 NM_001166006 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr11-7282 chr11 35172287 35172497 + 11.2 0.000 intron (NM_001001389, intron 1 of 16) HSMAR2|DNA|TcMar-Mariner 9442 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr15-1137 chr15 52528138 52528348 + 11.2 0.000 intron (NM_001142495, intron 1 of 39) CpG 637 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr13-408 chr13 20392171 20392381 + 11.2 0.000 Intergenic CpG 41570 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr10-2169 chr10 124617584 124617794 + 11.2 0.000 Intergenic Intergenic -86339 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr21-632 chr21 45137079 45137289 + 11.2 0.000 intron (NR_027673, intron 3 of 12) intron (NR_027673, intron 3 of 12) -15346 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr8-2252 chr8 61921736 61921946 + 11.2 0.000 Intergenic L2|LINE|L2 32002 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr10-1427 chr10 13827598 13827808 + 11.2 0.000 intron (NM_001318336, intron 2 of 23) intron (NM_001318336, intron 2 of 23) -120136 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr11-3252 chr11 73647387 73647597 + 11.2 0.000 promoter-TSS (NM_001130034) promoter-TSS (NM_001130034) -162 NM_001130035 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr13-1527 chr13 25848194 25848404 + 11.2 0.000 intron (NM_016529, intron 30 of 36) intron (NM_016529, intron 30 of 36) 202761 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr1-7052 chr1 179754184 179754394 + 11.2 0.000 intron (NM_001329719, intron 1 of 4) intron (NM_001329719, intron 1 of 4) 10998 NM_173509 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding chr20-1609 chr20 9686406 9686616 + 11.2 0.000 intron (NM_020341, intron 3 of 10) AluJo|SINE|Alu 152565 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr7-6866 chr7 50116052 50116262 + 11.2 0.000 intron (NM_001161834, intron 2 of 8) AluJb|SINE|Alu 20071 NM_001161834 100130988 Hs.99248 NM_001161834 ENSG00000164500 SPATA48 C7orf72 spermatogenesis associated 48 protein-coding chr9-3570 chr9 72703652 72703862 + 11.2 0.000 intron (NM_138691, intron 8 of 23) intron (NM_138691, intron 8 of 23) 170352 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr10-2484 chr10 31318720 31318930 + 11.2 0.000 promoter-TSS (NM_001174095) promoter-TSS (NM_001174095) 7 NM_001323645 6935 Hs.124503 NM_030751 ENSG00000148516 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding chr1-6031 chr1 66624542 66624752 + 11.2 0.000 intron (NM_001350218, intron 1 of 22) intron (NM_001350218, intron 1 of 22) -3793 NR_036060 100422871 NR_036060 ENSG00000264720 MIR3117 mir-3117 microRNA 3117 ncRNA chr2-1925 chr2 196403805 196404015 + 11.2 0.000 intron (NM_020760, intron 2 of 28) intron (NM_020760, intron 2 of 28) -41733 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr6-2079 chr6 135568474 135568684 + 11.2 0.000 intron (NR_152845, intron 2 of 4) intron (NR_152845, intron 2 of 4) 70778 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr14-3630 chr14 66247053 66247263 + 11.2 0.000 Intergenic AluSz|SINE|Alu -239213 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr8-2516 chr8 22119002 22119212 + 11.2 0.000 intron (NM_018411, intron 15 of 17) intron (NM_018411, intron 15 of 17) -9688 NM_024815 79873 Hs.527101 NM_024815 ENSG00000275074 NUDT18 MTH3 nudix hydrolase 18 protein-coding chr18-760 chr18 9145775 9145985 + 11.2 0.000 intron (NM_001204056, intron 1 of 11) intron (NM_001204056, intron 1 of 11) 8317 NM_001204056 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding chr9-2174 chr9 129910666 129910876 + 11.2 0.000 intron (NM_001363755, intron 11 of 15) intron (NM_001363755, intron 11 of 15) 41166 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr9-4947 chr9 15400152 15400362 + 11.2 0.000 Intergenic AluJr4|SINE|Alu -22527 NM_001039697 6619 Hs.546299 NM_003084 ENSG00000164975 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex polypeptide 3 protein-coding chr9-3579 chr9 75002320 75002530 + 11.2 0.000 intron (NM_001320497, intron 3 of 7) MER33|DNA|hAT-Charlie 24726 NM_001320497 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding chr7-2332 chr7 137682182 137682392 + 11.2 0.000 intron (NM_001321710, intron 2 of 32) intron (NM_001321710, intron 2 of 32) 164045 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr18-1537 chr18 12726014 12726224 + 11.2 0.000 TTS (NM_020232) TTS (NM_020232) 23077 NM_020232 56984 Hs.464652 NM_020232 ENSG00000128789 PSMG2 CLAST3|HCCA3|HsT1707|MDS003|PAC2|TNFSF5IP1 proteasome assembly chaperone 2 protein-coding chr5-2922 chr5 136380706 136380916 + 11.2 0.000 Intergenic AluSg|SINE|Alu -15335 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr21-1809 chr21 39336512 39336722 + 11.2 0.000 Intergenic Intergenic 12471 NM_004965 3150 Hs.356285 NM_004965 ENSG00000205581 HMGN1 HMG14 high mobility group nucleosome binding domain 1 protein-coding chr9-2249 chr9 77215998 77216208 + 11.2 0.000 intron (NM_001018038, intron 10 of 68) LTR41|LTR|ERVL -38186 NR_026668 100286938 Hs.662256 NR_026668 ENSG00000232998 VPS13A-AS1 - VPS13A antisense RNA 1 ncRNA chr14-1507 chr14 51655764 51655974 + 11.2 0.000 intron (NM_001267046, intron 1 of 13) intron (NM_001267046, intron 1 of 13) 3959 NM_152330 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr12-1447 chr12 115963024 115963234 + 11.2 0.000 intron (NM_015335, intron 30 of 30) intron (NM_015335, intron 30 of 30) 185525 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr4-3432 chr4 81948579 81948789 + 11.2 0.000 Intergenic Intergenic 425307 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr12-2659 chr12 27226349 27226559 + 11.2 0.000 Intergenic Intergenic -17832 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr1-3120 chr1 44326073 44326283 + 11.2 0.000 intron (NM_001301701, intron 2 of 7) intron (NM_001301701, intron 2 of 7) 29079 NM_024066 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding chr3-1630 chr3 58206274 58206484 + 11.2 0.000 intron (NM_004944, intron 2 of 7) intron (NM_004944, intron 2 of 7) 4593 NM_004944 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding chr6-3396 chr6 70405393 70405603 + 11.2 0.000 Intergenic Intergenic -7906 NM_001351599 57579 Hs.211700 NM_020819 ENSG00000082269 FAM135A KIAA1411 family with sequence similarity 135 member A protein-coding chr11-3273 chr11 76706612 76706822 + 11.2 0.000 intron (NR_024042, intron 11 of 20) intron (NR_024042, intron 11 of 20) 15072 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr11-4133 chr11 44361771 44361981 + 11.2 0.000 Intergenic Intergenic -51737 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr10-3937 chr10 93077065 93077275 + 11.2 0.000 exon (NM_000783, exon 7 of 7) exon (NM_000783, exon 7 of 7) 3277 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr5-1649 chr5 177022787 177022997 + 11.2 0.000 exon (NM_001308221, exon 1 of 3) exon (NM_001308221, exon 1 of 3) 196 NM_001308221 23567 Hs.484259 NM_012279 ENSG00000113761 ZNF346 JAZ|Zfp346 zinc finger protein 346 protein-coding chr5-3374 chr5 139186564 139186774 + 11.2 0.000 intron (NM_022464, intron 1 of 9) MER102c|DNA|hAT-Charlie 11699 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr12-1855 chr12 48881910 48882120 + 11.2 0.000 Intergenic Intergenic -16145 NM_014470 27289 Hs.124940 NM_014470 ENSG00000172602 RND1 ARHS|RHO6|RHOS Rho family GTPase 1 protein-coding chr11-2309 chr11 64870413 64870623 + 11.2 0.000 intron (NM_006795, intron 2 of 4) MIRb|SINE|MIR 8091 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr8-600 chr8 123157820 123158030 + 11.2 0.000 intron (NM_001363151, intron 19 of 19) intron (NM_001363151, intron 19 of 19) -21122 NM_207006 84985 Hs.379821 NM_032899 ENSG00000147689 FAM83A BJ-TSA-9 family with sequence similarity 83 member A protein-coding chr4-4157 chr4 8164641 8164851 + 11.2 0.000 Intergenic Intergenic -5933 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr11-4900 chr11 60831010 60831220 + 11.2 0.000 Intergenic Intergenic -10998 NM_024098 79080 Hs.4253 NM_024098 ENSG00000110104 CCDC86 - coiled-coil domain containing 86 protein-coding chr17-4957 chr17 79135955 79136165 + 11.2 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 61123 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr9-2885 chr9 131287079 131287289 + 11.2 0.000 Intergenic Intergenic -2539 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr19-2714 chr19 29694726 29694936 + 11.2 0.000 Intergenic Intergenic 20225 NM_001031726 83636 Hs.529094 NM_031448 ENSG00000131943 C19orf12 MPAN|NBIA3|NBIA4|SPG43 chromosome 19 open reading frame 12 protein-coding chr2-3765 chr2 9213184 9213394 + 11.2 0.000 intron (NM_003887, intron 1 of 27) L2a|LINE|L2 6477 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr11-10002 chr11 79536361 79536571 + 11.2 0.000 Intergenic L2a|LINE|L2 -95436 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr21-432 chr21 36747286 36747496 + 11.2 0.000 intron (NM_005069, intron 10 of 10) MER33|DNA|hAT-Charlie 48276 NM_005069 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 SIM bHLH transcription factor 2 protein-coding chr8-4210 chr8 85544153 85544363 + 11.2 0.000 Intergenic MamGypLTR2b|LTR|Gypsy -79343 NR_121630 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA chr7-1045 chr7 102512700 102512910 + 11.2 0.000 intron (NM_001277335, intron 1 of 19) intron (NM_001277335, intron 1 of 19) 4972 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr10-1894 chr10 113550469 113550679 + 11.2 0.000 promoter-TSS (NM_001177660) promoter-TSS (NM_001177660) -257 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr3-5013 chr3 25423844 25424054 + 11.2 0.000 intron (NM_001290300, intron 1 of 7) intron (NM_001290300, intron 1 of 7) -4314 NM_000965 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr2-6532 chr2 204365969 204366179 + 11.2 0.000 Intergenic Intergenic -179401 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr11-2359 chr11 112613140 112613350 + 11.2 0.000 Intergenic Intergenic -57443 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr5-1978 chr5 143153847 143154057 + 11.2 0.000 intron (NM_001349547, intron 20 of 21) intron (NM_001349547, intron 20 of 21) -38548 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr14-2014 chr14 58430283 58430493 + 11.2 0.000 intron (NM_001329944, intron 2 of 31) intron (NM_001329944, intron 2 of 31) 2669 NM_001329945 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr1-2212 chr1 100896765 100896975 + 11.2 0.000 intron (NM_133496, intron 2 of 10) intron (NM_133496, intron 2 of 10) 780 NM_133496 148867 Hs.533903 NM_133496 ENSG00000162695 SLC30A7 ZNT7|ZnT-7|ZnTL2 solute carrier family 30 member 7 protein-coding chr12-2036 chr12 57463700 57463910 + 11.2 0.000 intron (NM_001167609, intron 2 of 10) intron (NM_001167609, intron 2 of 10) 3654 NM_001167609 2735 Hs.632702 NM_005269 ENSG00000111087 GLI1 GLI|PAPA8|PPD1 GLI family zinc finger 1 protein-coding chr5-5196 chr5 112586968 112587178 + 11.2 0.000 Intergenic L1P2|LINE|L1 -41363 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr9-2575 chr9 135765516 135765726 + 11.2 0.000 intron (NM_001272003, intron 11 of 30) intron (NM_001272003, intron 11 of 30) 63436 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr10-7939 chr10 52729668 52729878 + 11.2 0.000 intron (NR_155748, intron 1 of 2) intron (NR_155748, intron 1 of 2) 25631 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA chrX-3068 chrX 112663026 112663236 + 11.2 0.000 intron (NM_178175, intron 2 of 3) L2c|LINE|L2 16807 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr11-2547 chr11 86799111 86799321 + 11.2 0.000 intron (NM_001293180, intron 1 of 1) FRAM|SINE|Alu -1326 NR_120591 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr2-12432 chr2 57570115 57570325 + 11.2 0.000 Intergenic LTR89|LTR|ERVL? -337431 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr6-1274 chr6 73586168 73586378 + 11.2 0.000 Intergenic AluJb|SINE|Alu -65241 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr6-4244 chr6 6907556 6907766 + 11.2 0.000 Intergenic Intergenic -200082 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr7-3868 chr7 104967632 104967842 + 11.2 0.000 Intergenic Intergenic 23428 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr2-1954 chr2 234496166 234496376 + 11.2 0.000 exon (NM_001282431, exon 1 of 2) exon (NM_001282431, exon 1 of 2) 778 NM_005737 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr1-4017 chr1 179575686 179575896 + 11.2 0.000 exon (NM_014625, exon 1 of 8) exon (NM_014625, exon 1 of 8) 157 NM_001297575 7827 Hs.412710 NM_014625 ENSG00000116218 NPHS2 PDCN|SRN1 NPHS2 stomatin family member, podocin protein-coding chr14-3714 chr14 19827968 19828178 + 11.2 0.000 exon (NM_001004723, exon 2 of 2) exon (NM_001004723, exon 2 of 2) 24303 NM_001004723 390429 Hs.512490 NM_001004723 ENSG00000176294 OR4N2 OR14-13|OR14-8 olfactory receptor family 4 subfamily N member 2 protein-coding chr1-7299 chr1 244077790 244078000 + 11.2 0.000 Intergenic Intergenic 24690 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr7-2306 chr7 93147546 93147756 + 11.2 0.000 intron (NM_001303496, intron 1 of 4) intron (NM_001303496, intron 1 of 4) 734 NM_001303500 219285 Hs.489118 NM_152703 ENSG00000177409 SAMD9L ATXPC|C7orf6|DRIF2|UEF1 sterile alpha motif domain containing 9 like protein-coding chr19-3445 chr19 20078274 20078484 + 11.2 0.000 intron (NM_007138, intron 1 of 3) intron (NM_007138, intron 1 of 3) 379 NM_007138 7643 Hs.55304 NM_007138 ENSG00000213988 ZNF90 HTF9 zinc finger protein 90 protein-coding chr2-12893 chr2 98748323 98748533 + 11.2 0.000 Intergenic Intergenic -17296 NM_012214 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding chr16-1948 chr16 19092070 19092280 + 11.2 0.000 Intergenic MLT2B4|LTR|ERVL -21757 NM_001034841 162073 Hs.530899 NM_001034841 ENSG00000205730 ITPRIPL2 - ITPRIP like 2 protein-coding chr15-850 chr15 67115072 67115282 + 11.2 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -10539 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr17-2045 chr17 47695773 47695983 + 11.2 0.000 5' UTR (NM_014726, exon 1 of 9) 5' UTR (NM_014726, exon 1 of 9) 614 NM_014726 9755 Hs.94790 NM_014726 ENSG00000198933 TBKBP1 ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding chr5-2117 chr5 71836535 71836745 + 11.2 0.000 Intergenic Intergenic 117365 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr2-5379 chr2 100182622 100182832 + 11.2 0.000 Intergenic Intergenic -25527 NR_103730 150577 Hs.434127 NM_001102655 ENSG00000232084 LINC01104 - long intergenic non-protein coding RNA 1104 ncRNA chr2-3163 chr2 199978023 199978233 + 11.2 0.000 Intergenic Intergenic -22637 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr9-1343 chr9 123350685 123350895 + 11.2 0.000 Intergenic L2b|LINE|L2 -5407 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr2-3173 chr2 203533424 203533634 + 11.2 0.000 intron (NM_001329728, intron 1 of 15) Tigger19b|DNA|TcMar-Tigger 1772 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr13-1526 chr13 25292440 25292650 + 11.2 0.000 Intergenic Intergenic -5057 NM_004685 9107 Hs.643702 NM_004685 ENSG00000139505 MTMR6 - myotubularin related protein 6 protein-coding chr14-1537 chr14 61218720 61218930 + 11.2 0.000 Intergenic Intergenic 62513 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr8-1549 chr8 116424038 116424248 + 11.2 0.000 Intergenic Intergenic -99084 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr2-12088 chr2 33238035 33238245 + 11.2 0.000 intron (NM_206943, intron 9 of 33) intron (NM_206943, intron 9 of 33) 103543 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr6-971 chr6 85679013 85679223 + 11.2 0.000 promoter-TSS (NR_003038) promoter-TSS (NR_003038) -385 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr12-944 chr12 49337078 49337288 + 11.2 0.000 promoter-TSS (NM_001008223) promoter-TSS (NM_001008223) 5 NM_001008223 338761 Hs.380386 NM_001008223 ENSG00000186897 C1QL4 C1QTNF11|CTRP11 complement C1q like 4 protein-coding chr2-8797 chr2 167881169 167881379 + 11.2 0.000 intron (NR_131227, intron 2 of 4) intron (NR_131227, intron 2 of 4) 59870 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chrX-634 chrX 129977838 129978048 + 11.2 0.000 Intergenic MIRc|SINE|MIR -27245 NM_001184772 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr2-5248 chr2 51717371 51717581 + 11.2 0.000 intron (NR_135237, intron 5 of 10) intron (NR_135237, intron 5 of 10) -653172 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr7-3643 chr7 43594499 43594709 + 11.2 0.000 intron (NM_004760, intron 1 of 6) intron (NM_004760, intron 1 of 6) 11496 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr15-3379 chr15 86663315 86663525 + 11.2 0.000 intron (NM_152336, intron 22 of 24) intron (NM_152336, intron 22 of 24) -269460 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr16-4501 chr16 57852367 57852577 + 11.2 0.000 Intergenic HAL1|LINE|L1 41835 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding chr10-2814 chr10 3995351 3995561 + 11.2 0.000 Intergenic L1PA8|LINE|L1 4296 NR_106726 102464829 NR_106726 ENSG00000274809 MIR6078 hsa-mir-6078 microRNA 6078 ncRNA chr4-2742 chr4 7762428 7762638 + 11.2 0.000 3' UTR (NM_001371090, exon 16 of 16) 3' UTR (NM_001371090, exon 16 of 16) 8443 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr8-1998 chr8 90940391 90940601 + 11.2 0.000 intron (NM_022351, intron 9 of 12) MER5B|DNA|hAT-Charlie 44581 NM_001363275 100127983 Hs.733266 NM_001190972 ENSG00000253250 C8orf88 - chromosome 8 open reading frame 88 protein-coding chr2-3126 chr2 169584600 169584810 + 11.2 0.000 intron (NM_004792, intron 1 of 13) CpG 354 NM_004792 9360 Hs.470544 NM_004792 ENSG00000138398 PPIG CARS-Cyp|CYP|SCAF10|SRCyp peptidylprolyl isomerase G protein-coding chr12-1482 chr12 13000360 13000570 + 11.2 0.000 promoter-TSS (NR_002774) promoter-TSS (NR_002774) 23 NR_002774 93164 Hs.593282 NR_002774 ENSG00000183935 HTR7P1 HTR7P 5-hydroxytryptamine receptor 7 pseudogene 1 pseudo chr15-1541 chr15 65411355 65411565 + 11.2 0.000 intron (NM_020962, intron 1 of 19) MIRb|SINE|MIR 11487 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr11-5447 chr11 72622793 72623003 + 11.2 0.000 intron (NM_001143839, intron 1 of 29) intron (NM_001143839, intron 1 of 29) -7768 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chr5-1357 chr5 33195944 33196154 + 11.2 0.000 Intergenic L1P4a|LINE|L1 -33686 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr11-3015 chr11 720093 720303 + 11.2 0.000 exon (NM_022772, exon 5 of 21) exon (NM_022772, exon 5 of 21) -13115 NM_001367390 10522 Hs.243994 NM_021008 ENSG00000177030 DEAF1 MRD24|NUDR|SPN|ZMYND5 DEAF1 transcription factor protein-coding chr4-1620 chr4 72505390 72505600 + 11.2 0.000 intron (NM_014243, intron 3 of 21) L1PA15-16|LINE|L1 63726 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr17-2704 chr17 60045244 60045454 + 11.2 0.000 intron (NM_022070, intron 19 of 19) intron (NM_022070, intron 19 of 19) -2244 NR_039890 100616210 NR_039890 ENSG00000264049 MIR4737 - microRNA 4737 ncRNA chr16-2496 chr16 88948135 88948345 + 11.2 0.000 intron (NM_001290330, intron 1 of 1) Charlie2a|DNA|hAT-Charlie -6890 NM_175931 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr1-4174 chr1 29209227 29209437 + 11.2 0.000 intron (NM_001349715, intron 4 of 10) MER112|DNA|hAT-Charlie 21602 NM_001349715 51102 Hs.183646 NM_016011 ENSG00000116353 MECR CGI-63|DYTOABG|ETR1|FASN2B|NRBF1 mitochondrial trans-2-enoyl-CoA reductase protein-coding chr1-10093 chr1 95599274 95599484 + 11.2 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 89263 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA chr1-3337 chr1 29156921 29157131 + 11.2 0.000 intron (NM_005626, intron 3 of 5) LTR14|LTR|ERVK 24874 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding chr15-1269 chr15 85707704 85707914 + 11.2 0.000 intron (NM_007200, intron 17 of 36) intron (NM_007200, intron 17 of 36) 50916 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr2-8024 chr2 70005569 70005779 + 11.2 0.000 intron (NR_033872, intron 7 of 10) intron (NR_033872, intron 7 of 10) -43409 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase retroviral like 1 protein-coding chr3-2628 chr3 195032979 195033189 + 11.2 0.000 Intergenic MIRb|SINE|MIR -61504 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr12-2372 chr12 20874310 20874520 + 11.2 0.000 intron (NM_019844, intron 8 of 15) L1M3de|LINE|L1 51867 NM_001349920 28234 Hs.504966 NM_019844 ENSG00000111700 SLCO1B3 HBLRR|LST-2|LST-3TM13|LST3|OATP-8|OATP1B3|OATP8|SLC21A8 solute carrier organic anion transporter family member 1B3 protein-coding chr19-2342 chr19 45852319 45852529 + 11.2 0.000 intron (NM_004819, intron 4 of 26) intron (NM_004819, intron 4 of 26) 10723 NM_004819 8189 Hs.515475 NM_004819 ENSG00000125755 SYMPK SPK|SYM symplekin protein-coding chr5-2396 chr5 98763253 98763463 + 11.2 0.000 Intergenic Intergenic -5274 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr1-5744 chr1 107626370 107626580 + 11.2 0.000 intron (NM_006113, intron 20 of 26) intron (NM_006113, intron 20 of 26) 62024 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr3-3601 chr3 74773412 74773622 + 11.2 0.000 Intergenic Intergenic -252377 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr20-1010 chr20 431629 431839 + 11.2 0.000 non-coding (NR_136659, exon 12 of 12) non-coding (NR_136659, exon 12 of 12) 23435 NR_136659 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr13-850 chr13 99829234 99829444 + 11.2 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) -100338 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr1-6816 chr1 94160942 94161152 + 11.2 0.000 Intergenic Intergenic -39899 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chrX-3639 chrX 97126059 97126269 + 11.2 0.000 intron (NM_007309, intron 21 of 26) intron (NM_007309, intron 21 of 26) 242256 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr9-2326 chr9 16985913 16986123 + 11.2 0.000 Intergenic Intergenic -115348 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr12-1006 chr12 2835030 2835240 + 11.2 0.000 promoter-TSS (NM_031474) promoter-TSS (NM_031474) -100 NM_031474 83714 Hs.530816 NM_031474 ENSG00000053702 NRIP2 - nuclear receptor interacting protein 2 protein-coding chr8-2297 chr8 126699021 126699231 + 11.2 0.000 Intergenic L1PA16|LINE|L1 -140648 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr2-4146 chr2 172623137 172623347 + 11.2 0.000 intron (NR_103731, intron 12 of 13) intron (NR_103731, intron 12 of 13) 67152 NR_103729 5163 Hs.470633 NM_002610 ENSG00000152256 PDK1 - pyruvate dehydrogenase kinase 1 protein-coding chr17-1873 chr17 42981076 42981286 + 11.2 0.000 promoter-TSS (NM_001136042) promoter-TSS (NM_001136042) 616 NM_173079 146923 Hs.632255 NM_173079 ENSG00000198863 RUNDC1 - RUN domain containing 1 protein-coding chr1-7551 chr1 198234525 198234735 + 11.2 0.000 intron (NM_133494, intron 2 of 9) intron (NM_133494, intron 2 of 9) 77632 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr10-1580 chr10 14365297 14365507 + 11.2 0.000 Intergenic Intergenic 17875 NR_036181 100422843 NR_036181 ENSG00000266321 MIR4293 - microRNA 4293 ncRNA chr2-2365 chr2 230418473 230418683 + 11.2 0.000 intron (NM_001080391, intron 2 of 28) HAL1b|LINE|L1 1822 NM_001206704 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr18-1863 chr18 25239736 25239946 + 11.2 0.000 intron (NM_001308225, intron 2 of 6) intron (NM_001308225, intron 2 of 6) 112325 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr16-1729 chr16 66935425 66935635 + 11.2 0.000 promoter-TSS (NM_001365405) promoter-TSS (NM_001365405) 14 NM_001365406 8824 Hs.282975 NM_003869 ENSG00000172831 CES2 CE-2|CES2A1|PCE-2|iCE carboxylesterase 2 protein-coding chr17-3022 chr17 77046681 77046891 + 11.2 0.000 Intergenic AluJo|SINE|Alu -41857 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr14-1660 chr14 50775431 50775641 + 11.2 0.000 intron (NM_016350, intron 7 of 28) intron (NM_016350, intron 7 of 28) -46261 NR_135258 105370489 Hs.569387 NR_135258 ENSG00000258843 LOC105370489 - uncharacterized LOC105370489 ncRNA chr5-1355 chr5 32709919 32710129 + 11.2 0.000 promoter-TSS (NM_001204376) promoter-TSS (NM_001204376) -613 NM_001204376 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr3-4855 chr3 157938509 157938719 + 11.2 0.000 Intergenic Intergenic 167549 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr3-2420 chr3 196205533 196205743 + 11.2 0.000 intron (NR_135617, intron 5 of 8) L1ME1|LINE|L1 5762 NR_135617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr17-2603 chr17 80119257 80119467 + 11.2 0.000 3' UTR (NM_001079803, exon 21 of 21) 3' UTR (NM_001079803, exon 21 of 21) 17781 NM_001079803 2548 Hs.1437 NM_000152 ENSG00000171298 GAA LYAG glucosidase alpha, acid protein-coding chr7-1343 chr7 41029137 41029347 + 11.2 0.000 Intergenic Intergenic -49303 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr17-3396 chr17 2438899 2439109 + 11.2 0.000 intron (NM_024086, intron 7 of 9) intron (NM_024086, intron 7 of 9) -23568 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr7-1641 chr7 43622012 43622222 + 11.2 0.000 intron (NM_004760, intron 4 of 6) MIR|SINE|MIR 39009 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr3-3812 chr3 16478710 16478920 + 11.2 0.000 intron (NM_015150, intron 2 of 9) MLT1F2|LTR|ERVL-MaLR 34884 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr14-2898 chr14 37091749 37091959 + 11.2 0.000 intron (NM_001171170, intron 1 of 10) AluSz6|SINE|Alu -80172 NR_033240 100129794 Hs.601579 NR_033240 ENSG00000258708 SLC25A21-AS1 - SLC25A21 antisense RNA 1 ncRNA chr11-4845 chr11 18950646 18950856 + 11.2 0.000 Intergenic Intergenic -15749 NM_147199 259249 Hs.711459 NM_147199 ENSG00000170255 MRGPRX1 GPCR|MGRG2|MRGX1|SNSR4 MAS related GPR family member X1 protein-coding chr8-2357 chr8 27514375 27514585 + 11.2 0.000 intron (NM_001979, intron 6 of 18) intron (NM_001979, intron 6 of 18) 23337 NM_001256482 2053 Hs.212088 NM_001979 ENSG00000120915 EPHX2 ABHD20|CEH|SEH epoxide hydrolase 2 protein-coding chr6-3871 chr6 48383566 48383776 + 11.2 0.000 Intergenic L1PB3|LINE|L1 -314982 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr11-6159 chr11 44112380 44112590 + 11.2 0.000 intron (NM_207122, intron 3 of 13) intron (NM_207122, intron 3 of 13) 16288 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr2-6446 chr2 157469422 157469632 + 11.2 0.000 Intergenic Intergenic -25438 NM_004288 9595 Hs.270 NM_004288 ENSG00000115165 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding chr3-6154 chr3 57513180 57513390 + 11.2 0.000 intron (NM_198564, intron 4 of 11) L1PA8A|LINE|L1 31059 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr4-6453 chr4 140736806 140737016 + 11.2 0.000 intron (NM_015130, intron 1 of 20) intron (NM_015130, intron 1 of 20) 19474 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chrX-252 chrX 136909239 136909449 + 11.2 0.000 Intergenic G-rich|Low_complexity|Low_complexity -28564 NR_028477 27316 Hs.380118 NM_002139 ENSG00000147274 RBMX HNRNPG|HNRPG|MRXS11|RBMXP1|RBMXRT|RNMX|hnRNP-G RNA binding motif protein X-linked protein-coding chr6-3976 chr6 108707460 108707670 + 11.2 0.000 Intergenic Intergenic -44089 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr17-1836 chr17 10618295 10618505 + 11.2 0.000 intron (NR_125367, intron 10 of 10) intron (NR_125367, intron 10 of 10) 38909 NM_002470 4621 Hs.440895 NM_002470 ENSG00000109063 MYH3 CPSKF1A|CPSKF1B|DA2A|DA2B|DA2B3|DA8|HEMHC|MYHC-EMB|MYHSE1|SMHCE myosin heavy chain 3 protein-coding chr15-834 chr15 40589768 40589978 + 11.2 0.000 Intergenic Intergenic -4376 NM_170589 57082 Hs.181855 NM_144508 ENSG00000137812 KNL1 AF15Q14|CASC5|CT29|D40|MCPH4|PPP1R55|Spc7|hKNL-1|hSpc105 kinetochore scaffold 1 protein-coding chr17-5116 chr17 6091709 6091919 + 11.2 0.000 intron (NM_015253, intron 4 of 8) intron (NM_015253, intron 4 of 8) 21200 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr2-3835 chr2 27715392 27715602 + 11.2 0.000 promoter-TSS (NR_160725) promoter-TSS (NR_160725) 235 NR_135200 100129995 Hs.515878 NR_135200 ENSG00000205334 LINC01460 - long intergenic non-protein coding RNA 1460 ncRNA chr19-2958 chr19 10748484 10748694 + 11.2 0.000 intron (NM_001005362, intron 1 of 19) intron (NM_001005362, intron 1 of 19) 30185 NR_030368 693223 NR_030368 ENSG00000207972 MIR638 MIRN638|hsa-mir-638 microRNA 638 ncRNA chr12-2208 chr12 42759958 42760168 + 11.2 0.000 Intergenic Intergenic 67847 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr12-4605 chr12 38664628 38664838 + 11.2 0.000 intron (NM_153634, intron 19 of 19) intron (NM_153634, intron 19 of 19) 240858 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr8-2388 chr8 51450132 51450342 + 11.2 0.000 intron (NM_144651, intron 10 of 22) MER41B|LTR|ERV1 359208 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr12-1803 chr12 541170 541380 + 11.2 0.000 intron (NM_173593, intron 3 of 19) MIR3|SINE|MIR 45211 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr3-9221 chr3 37770492 37770702 + 11.2 0.000 intron (NR_110531, intron 3 of 3) intron (NR_110531, intron 3 of 3) 91183 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr12-4112 chr12 62740146 62740356 + 11.2 0.000 intron (NM_020700, intron 4 of 9) intron (NM_020700, intron 4 of 9) 136565 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr14-1931 chr14 22052644 22052854 + 11.2 0.000 Intergenic Intergenic 380004 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr4-3872 chr4 138830045 138830255 + 11.2 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 182496 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr1-4357 chr1 94909413 94909623 + 11.2 0.000 intron (NM_001839, intron 1 of 6) intron (NM_001839, intron 1 of 6) 16290 NM_001286056 1266 Hs.483454 NM_001839 ENSG00000117519 CNN3 - calponin 3 protein-coding chr13-1498 chr13 113113360 113113570 + 11.2 0.000 intron (NR_051961, intron 2 of 6) MIRc|SINE|MIR 7674 NR_051961 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr20-1530 chr20 46206086 46206296 + 11.2 0.000 intron (NM_021248, intron 7 of 11) intron (NM_021248, intron 7 of 11) 87877 NM_001362758 958 Hs.472860 NM_001250 ENSG00000101017 CD40 Bp50|CDW40|TNFRSF5|p50 CD40 molecule protein-coding chr18-1543 chr18 21197653 21197863 + 11.2 0.000 Intergenic Intergenic -44484 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr5-3466 chr5 169081609 169081819 + 11.2 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 68487 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr11-7537 chr11 13992126 13992336 + 11.2 0.000 intron (NM_006108, intron 2 of 15) L1PA7|LINE|L1 29508 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr14-1953 chr14 32574234 32574444 + 11.2 0.000 intron (NM_004274, intron 4 of 13) intron (NM_004274, intron 4 of 13) 245041 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr6-3602 chr6 95594732 95594942 + 11.2 0.000 intron (NM_024641, intron 2 of 4) intron (NM_024641, intron 2 of 4) 17302 NM_024641 79694 Hs.734632 NM_024641 ENSG00000172469 MANEA ENDO|hEndo mannosidase endo-alpha protein-coding chr13-1014 chr13 32315247 32315457 + 11.2 0.000 promoter-TSS (NM_000059) promoter-TSS (NM_000059) -128 NM_000059 675 Hs.34012 NM_000059 ENSG00000139618 BRCA2 BRCC2|BROVCA2|FACD|FAD|FAD1|FANCD|FANCD1|GLM3|PNCA2|XRCC11 BRCA2 DNA repair associated protein-coding chr11-5576 chr11 106444860 106445070 + 11.2 0.000 Intergenic MIR|SINE|MIR 193558 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr1-8925 chr1 7383748 7383958 + 11.2 0.000 intron (NR_146199, intron 2 of 2) intron (NR_146199, intron 2 of 2) 5901 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr19-2822 chr19 51777868 51778078 + 11.2 0.000 Intergenic Intergenic 14584 NM_001462 2358 Hs.99855 NM_001462 ENSG00000171049 FPR2 ALXR|FMLP-R-II|FMLPX|FPR2A|FPRH1|FPRH2|FPRL1|HM63|LXA4R formyl peptide receptor 2 protein-coding chr1-7822 chr1 61781326 61781536 + 11.2 0.000 intron (NM_001350145, intron 7 of 43) intron (NM_001350145, intron 7 of 43) 38951 NM_001350145 10207 Hs.478125 NM_005799 ENSG00000132849 PATJ Cipp|INADL|InaD-like|hINADL PATJ crumbs cell polarity complex component protein-coding chr4-3748 chr4 82493909 82494119 + 11.2 0.000 intron (NM_001080506, intron 6 of 7) intron (NM_001080506, intron 6 of 7) 63424 NR_120457 58478 Hs.18442 NM_021204 ENSG00000145293 ENOPH1 E1|MASA|MST145|mtnC enolase-phosphatase 1 protein-coding chr14-1338 chr14 77158296 77158506 + 11.2 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -16610 NM_174976 283576 Hs.525485 NM_174976 ENSG00000177108 ZDHHC22 C14orf59 zinc finger DHHC-type containing 22 protein-coding chr9-2160 chr9 124818659 124818869 + 11.2 0.000 Intergenic Intergenic 17890 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr5-3135 chr5 59266591 59266801 + 11.2 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 9419 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr16-6554 chr16 65058662 65058872 + 11.2 0.000 intron (NM_001330576, intron 1 of 11) MIRb|SINE|MIR 63296 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr4-3583 chr4 2042534 2042744 + 11.2 0.000 intron (NM_001168243, intron 2 of 3) CpG-20879 644 NM_001141936 401115 Hs.446474 NM_001141936 ENSG00000243449 C4orf48 CHR4_55 chromosome 4 open reading frame 48 protein-coding chr17-8583 chr17 80391420 80391630 + 11.2 0.000 intron (NM_001256071, intron 67 of 67) AluSx1|SINE|Alu -23642 NM_001164637 284131 Hs.389678 NM_173627 ENSG00000173818 ENDOV - endonuclease V protein-coding chr22-1281 chr22 35546853 35547063 + 11.2 0.000 exon (NM_001366725, exon 2 of 3) exon (NM_001366725, exon 2 of 3) 6127 NM_014310 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr7-7505 chr7 101924185 101924395 + 11.2 0.000 intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 106664 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr11-5566 chr11 102234750 102234960 + 11.2 0.000 Intergenic Intergenic -82629 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr7-4608 chr7 22667752 22667962 + 11.2 0.000 Intergenic Intergenic -2324 NR_122075 401312 Hs.583393 NR_122075 ENSG00000105889 LOC401312 - uncharacterized LOC401312 ncRNA chr9-4349 chr9 129867778 129867988 + 11.2 0.000 intron (NM_001008563, intron 10 of 25) intron (NM_001008563, intron 10 of 25) -1722 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr17-3930 chr17 58631364 58631574 + 11.2 0.000 intron (NM_031272, intron 2 of 31) intron (NM_031272, intron 2 of 31) 60586 NM_001201457 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113|SPGF23 testis expressed 14, intercellular bridge forming factor protein-coding chr2-9512 chr2 237400307 237400517 + 11.2 0.000 intron (NM_057165, intron 1 of 7) intron (NM_057165, intron 1 of 7) 13752 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding KI270729.1-8 KI270729.1 11067 11277 + 11.2 0.000 NA NA NA NA chr1-6191 chr1 205038240 205038450 + 11.2 0.000 Intergenic Intergenic -4604 NM_001346083 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr20-684 chr20 63160652 63160862 + 11.2 0.000 Intergenic Intergenic -17743 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA GL000225.1-32 GL000225.1 1484 1694 + 11.2 0.000 NA NA NA NA chr17-2869 chr17 31534173 31534383 + 11.2 0.000 promoter-TSS (NR_039877) promoter-TSS (NR_039877) -605 NR_039877 100616248 NR_039877 ENSG00000284424 MIR4724 mir-4724 microRNA 4724 ncRNA chr18-381 chr18 45951429 45951639 + 11.2 0.000 intron (NM_020964, intron 3 of 43) AluSx1|SINE|Alu 15795 NM_020964 57724 Hs.514843 NM_020964 ENSG00000152223 EPG5 HEEW1|KIAA1632|VICIS ectopic P-granules autophagy protein 5 homolog protein-coding chr13-1980 chr13 20814478 20814688 + 11.2 0.000 intron (NM_022459, intron 9 of 22) intron (NM_022459, intron 9 of 22) -40622 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr5-1274 chr5 132369603 132369813 + 11.2 0.000 promoter-TSS (NM_001308122) promoter-TSS (NM_001308122) -1 NM_001308122 6584 Hs.443572 NM_003060 ENSG00000197375 SLC22A5 CDSP|OCTN2 solute carrier family 22 member 5 protein-coding chr12-3650 chr12 107474926 107475136 + 11.2 0.000 intron (NM_001347944, intron 1 of 14) intron (NM_001347944, intron 1 of 14) -105843 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr22-3006 chr22 20475972 20476182 + 11.2 0.000 intron (NM_032775, intron 2 of 6) L1M5|LINE|L1 19718 NM_032775 84861 Hs.517419 NM_032775 ENSG00000099910 KLHL22 KELCHL kelch like family member 22 protein-coding chr9-4599 chr9 99086519 99086729 + 11.2 0.000 Intergenic Intergenic -18489 NM_001306210 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chrX-2518 chrX 96438759 96438969 + 11.2 0.000 Intergenic Intergenic -100962 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr11-2836 chr11 1219934 1220144 + 11.2 0.000 Intergenic Intergenic -3027 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr13-2218 chr13 24034038 24034248 + 11.2 0.000 non-coding (NR_104595, exon 5 of 5) non-coding (NR_104595, exon 5 of 5) 54341 NR_104595 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr17-3538 chr17 74176887 74177097 + 11.2 0.000 Intergenic Intergenic -26686 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr1-1956 chr1 89524641 89524851 + 11.2 0.000 promoter-TSS (NM_001134476) promoter-TSS (NM_001134476) -83 NM_001134476 23507 Hs.482017 NM_015350 ENSG00000197147 LRRC8B TA-LRRP|TALRRP leucine rich repeat containing 8 VRAC subunit B protein-coding chr17-1207 chr17 80036464 80036674 + 11.2 0.000 promoter-TSS (NM_019020) promoter-TSS (NM_019020) -63 NM_001243342 55036 Hs.202542 NM_017950 ENSG00000141519 CCDC40 CILD15|FAP172 coiled-coil domain containing 40 protein-coding chr11-4896 chr11 57763544 57763754 + 11.2 0.000 intron (NM_001085467, intron 1 of 16) intron (NM_001085467, intron 1 of 16) 1847 NM_001206887 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr18-847 chr18 23401524 23401734 + 11.2 0.000 intron (NR_148382, intron 1 of 12) intron (NR_148382, intron 1 of 12) 36332 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr10-2507 chr10 43362143 43362353 + 11.2 0.000 Intergenic CpG -9388 NM_173160 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr8-2400 chr8 65555780 65555990 + 11.2 0.000 intron (NR_033893, intron 1 of 4) intron (NR_033893, intron 1 of 4) 6781 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr11-8029 chr11 16493258 16493468 + 11.2 0.000 intron (NM_001367872, intron 3 of 16) L1ME3B|LINE|L1 -16975 NM_033326 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr7-3221 chr7 151260965 151261175 + 11.2 0.000 intron (NM_003078, intron 2 of 13) intron (NM_003078, intron 2 of 13) -12376 NM_001003801 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr1-10911 chr1 208944837 208945047 + 11.2 0.000 Intergenic Intergenic -27512 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr10-4340 chr10 29150104 29150314 + 11.2 0.000 Intergenic Intergenic -138861 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr1-8593 chr1 181933499 181933709 + 11.2 0.000 Intergenic HAL1|LINE|L1 128108 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chrX-4267 chrX 41009165 41009375 + 11.2 0.000 Intergenic Intergenic -76175 NM_001039590 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr6-2152 chr6 15244849 15245059 + 11.2 0.000 Intergenic CpG -1115 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr12-2624 chr12 124993117 124993327 + 11.2 0.000 promoter-TSS (NM_080626) promoter-TSS (NM_080626) -423 NM_080626 140707 Hs.596464 NM_080626 ENSG00000184992 BRI3BP BNAS1|HCCR-1|HCCR-2|HCCRBP-1|HCCRBP-3|KG19 BRI3 binding protein protein-coding chr15-902 chr15 46443164 46443374 + 11.2 0.000 Intergenic Intergenic 738074 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr4-2169 chr4 99594100 99594310 + 11.2 0.000 intron (NM_001300785, intron 6 of 17) MLT1G|LTR|ERVL-MaLR 30127 NM_001300785 4547 Hs.195799 NM_000253 ENSG00000138823 MTTP ABL|MTP microsomal triglyceride transfer protein protein-coding chr11-3613 chr11 69878752 69878962 + 11.2 0.000 Intergenic Intergenic -59441 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr10-7546 chr10 15034604 15034814 + 11.2 0.000 intron (NR_144471, intron 3 of 7) MamGypLTR3a|LTR|Gypsy 716 NR_144469 105376432 Hs.723069 NR_144469 DCLRE1CP1 - DNA cross-link repair 1C pseudogene 1 pseudo chr4-981 chr4 107930858 107931068 + 11.2 0.000 promoter-TSS (NM_183075) promoter-TSS (NM_183075) -586 NM_183075 113612 Hs.109087 NM_183075 ENSG00000155016 CYP2U1 P450TEC|SPG49|SPG56 cytochrome P450 family 2 subfamily U member 1 protein-coding chr9-3010 chr9 98777157 98777367 + 11.2 0.000 intron (NM_173551, intron 8 of 14) MamRep1894|DNA|hAT 19293 NM_173551 203286 Hs.406890 NM_173551 ENSG00000165138 ANKS6 ANKRD14|NPHP16|PKDR1|SAMD6 ankyrin repeat and sterile alpha motif domain containing 6 protein-coding chr14-3418 chr14 96140046 96140256 + 11.2 0.000 Intergenic Intergenic -64647 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr5-2308 chr5 56247672 56247882 + 11.2 0.000 Intergenic Intergenic -14447 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr4-3113 chr4 163693260 163693470 + 11.2 0.000 intron (NM_001166373, intron 4 of 7) ERVL-E-int|LTR|ERVL -79831 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr1-10785 chr1 201644196 201644406 + 11.2 0.000 Intergenic Intergenic -4021 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr1-9736 chr1 54028850 54029060 + 11.2 0.000 3' UTR (NM_001305049, exon 8 of 8) 3' UTR (NM_001305049, exon 8 of 8) -10769 NM_001276394 388633 Hs.439583 NM_001010978 ENSG00000203985 LDLRAD1 - low density lipoprotein receptor class A domain containing 1 protein-coding chr2-1671 chr2 96335932 96336142 + 11.2 0.000 intron (NM_001281712, intron 1 of 16) CpG 271 NM_015341 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr6-6734 chr6 2319904 2320114 + 11.1 0.000 intron (NR_046229, intron 3 of 6) LTR28B|LTR|ERV1 74256 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr6-3769 chr6 15889543 15889753 + 11.1 0.000 Intergenic Intergenic -226590 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr18-563 chr18 21747511 21747721 + 11.1 0.000 intron (NM_020774, intron 1 of 20) intron (NM_020774, intron 1 of 20) 6287 NM_020774 57534 Hs.140903 NM_020774 ENSG00000101752 MIB1 DIP-1|DIP1|LVNC7|MIB|ZZANK2|ZZZ6 mindbomb E3 ubiquitin protein ligase 1 protein-coding chr12-4606 chr12 39645808 39646018 + 11.1 0.000 intron (NM_001031748, intron 3 of 12) intron (NM_001031748, intron 3 of 12) 19730 NR_135051 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding chr3-8929 chr3 13482152 13482362 + 11.1 0.000 intron (NM_001136041, intron 2 of 9) MER113|DNA|hAT-Charlie 1951 NM_001136041 79885 Hs.744132 NM_024827 ENSG00000163517 HDAC11 HD11 histone deacetylase 11 protein-coding chr3-9643 chr3 60257025 60257235 + 11.1 0.000 intron (NM_001320900, intron 6 of 9) LTR37A|LTR|ERV1 -176221 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr11-2806 chr11 114280638 114280848 + 11.1 0.000 Intergenic Intergenic -15070 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr19-6694 chr19 35588972 35589182 + 11.1 0.000 Intergenic Intergenic -8818 NR_110750 102723617 Hs.579904 NR_110750 ENSG00000224910 LINC01766 - long intergenic non-protein coding RNA 1766 ncRNA chr13-874 chr13 29562912 29563122 + 11.1 0.000 intron (NM_003045, intron 1 of 12) intron (NM_003045, intron 1 of 12) 32671 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr1-7254 chr1 228862111 228862321 + 11.1 0.000 Intergenic Intergenic 126737 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr2-5404 chr2 109285380 109285590 + 11.1 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 28140 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr1-6448 chr1 17304238 17304448 + 11.1 0.000 Intergenic Intergenic -3854 NM_012387 23569 Hs.522969 NM_012387 ENSG00000159339 PADI4 PAD|PAD4|PADI5|PDI4|PDI5 peptidyl arginine deiminase 4 protein-coding chr9-5264 chr9 79796368 79796578 + 11.1 0.000 Intergenic Intergenic -28057 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr5-4296 chr5 150514932 150515142 + 11.1 0.000 intron (NM_001543, intron 1 of 14) intron (NM_001543, intron 1 of 14) 6906 NM_001543 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr11-7453 chr11 122701133 122701343 + 11.1 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 45516 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr2-3398 chr2 32826567 32826777 + 11.1 0.000 intron (NR_027098, intron 1 of 5) intron (NR_027098, intron 1 of 5) 1239 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr1-9968 chr1 80637138 80637348 + 11.1 0.000 intron (NR_125940, intron 2 of 3) MER61-int|LTR|ERV1 -4044 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr9-4448 chr9 20397363 20397573 + 11.1 0.000 intron (NM_001286691, intron 5 of 10) intron (NM_001286691, intron 5 of 10) 13770 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr16-579 chr16 1114009 1114219 + 11.1 0.000 Intergenic Intergenic -17870 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr4-1912 chr4 42285796 42286006 + 11.1 0.000 Intergenic LTR17|LTR|ERV1 105367 NR_134668 105374428 Hs.245131 NR_134668 ENSG00000250781 LOC105374428 - uncharacterized LOC105374428 ncRNA chr8-4355 chr8 101171887 101172097 + 11.1 0.000 Intergenic MIRc|SINE|MIR 33681 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr9-2243 chr9 35697528 35697738 + 11.1 0.000 3' UTR (NM_006289, exon 57 of 57) 3' UTR (NM_006289, exon 57 of 57) -7577 NM_003289 7169 Hs.300772 NM_003289 ENSG00000198467 TPM2 AMCD1|DA1|DA2B|DA2B4|HEL-S-273|NEM4|TMSB tropomyosin 2 protein-coding chr1-5212 chr1 183278221 183278431 + 11.1 0.000 intron (NM_170706, intron 8 of 10) intron (NM_170706, intron 8 of 10) 26548 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr10-3481 chr10 66411827 66412037 + 11.1 0.000 intron (NM_001127384, intron 11 of 17) LTR16|LTR|ERVL -514104 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr12-4515 chr12 23880785 23880995 + 11.1 0.000 intron (NM_001330785, intron 2 of 14) intron (NM_001330785, intron 2 of 14) 68780 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr5-2231 chr5 887830 888040 + 11.1 0.000 intron (NM_001009877, intron 5 of 15) intron (NM_001009877, intron 5 of 15) 4587 NR_134296 65980 Hs.449278 NM_023924 ENSG00000028310 BRD9 LAVS3040|PRO9856 bromodomain containing 9 protein-coding chr2-9062 chr2 201330802 201331012 + 11.1 0.000 intron (NR_110620, intron 6 of 13) intron (NR_110620, intron 6 of 13) 26438 NM_001289993 130540 Hs.107944 NM_139163 ENSG00000155749 FLACC1 ALS2CR12 flagellum associated containing coiled-coil domains 1 protein-coding chr8-6983 chr8 107900625 107900835 + 11.1 0.000 3' UTR (NM_001317942, exon 5 of 5) 3' UTR (NM_001317942, exon 5 of 5) 181209 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr2-3941 chr2 62678957 62679167 + 11.1 0.000 intron (NM_001142615, intron 1 of 22) MIRb|SINE|MIR 5184 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chrX-1165 chrX 46781383 46781593 + 11.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -22370 NM_032591 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr3-2870 chr3 45486222 45486432 + 11.1 0.000 intron (NM_001368263, intron 10 of 20) intron (NM_001368263, intron 10 of 20) 23218 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr7-5713 chr7 70369981 70370191 + 11.1 0.000 intron (NM_015570, intron 4 of 18) intron (NM_015570, intron 4 of 18) -762058 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr8-1652 chr8 144233479 144233689 + 11.1 0.000 intron (NM_001288814, intron 13 of 41) L1MB3|LINE|L1 29153 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr2-4424 chr2 134408643 134408853 + 11.1 0.000 intron (NM_001371457, intron 12 of 16) intron (NM_001371457, intron 12 of 16) 154676 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr8-4295 chr8 96906275 96906485 + 11.1 0.000 intron (NM_016134, intron 4 of 7) intron (NM_016134, intron 4 of 7) 261138 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr4-3286 chr4 140116688 140116898 + 11.1 0.000 intron (NM_018717, intron 1 of 4) AmnSINE1|SINE|5S-Deu-L2 -11222 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr2-9184 chr2 215466421 215466631 + 11.1 0.000 Intergenic Intergenic 12819 NR_110607 102724849 Hs.116161 NR_110607 ENSG00000225166 LOC102724849 - uncharacterized LOC102724849 ncRNA chr1-8006 chr1 217085073 217085283 + 11.1 0.000 intron (NM_001350122, intron 1 of 9) intron (NM_001350122, intron 1 of 9) 4440 NM_001350123 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr3-3452 chr3 151179618 151179828 + 11.1 0.000 intron (NM_053002, intron 10 of 42) intron (NM_053002, intron 10 of 42) 23493 NM_013308 29909 Hs.549152 NM_013308 ENSG00000174946 GPR171 H963 G protein-coupled receptor 171 protein-coding chr11-3813 chr11 66720851 66721061 + 11.1 0.000 intron (NM_006946, intron 2 of 36) intron (NM_006946, intron 2 of 36) 443 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chrX-1614 chrX 109684287 109684497 + 11.1 0.000 intron (NM_001318509, intron 2 of 15) intron (NM_001318509, intron 2 of 15) -48119 NR_158569 105373311 Hs.268785 NR_158569 LOC105373311 - uncharacterized LOC105373311 ncRNA chr2-12002 chr2 28272963 28273173 + 11.1 0.000 intron (NM_199193, intron 11 of 13) intron (NM_199193, intron 11 of 13) 37391 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr17-2297 chr17 40487874 40488084 + 11.1 0.000 intron (NM_032865, intron 3 of 12) intron (NM_032865, intron 3 of 12) 13644 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr2-4684 chr2 218026308 218026518 + 11.1 0.000 Intergenic Intergenic -8521 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr10-1866 chr10 88325926 88326136 + 11.1 0.000 intron (NM_018363, intron 5 of 6) THE1D|LTR|ERVL-MaLR 257287 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr8-3346 chr8 40269622 40269832 + 11.1 0.000 Intergenic LTR8A|LTR|ERV1 73636 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr11-6917 chr11 108116949 108117159 + 11.1 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -4513 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr17-2902 chr17 41940034 41940244 + 11.1 0.000 intron (NR_146622, intron 7 of 11) intron (NR_146622, intron 7 of 11) 9522 NR_146621 83538 Hs.201134 NM_031421 ENSG00000204815 TTC25 - tetratricopeptide repeat domain 25 protein-coding chr11-7184 chr11 130480417 130480627 + 11.1 0.000 Intergenic L2c|LINE|L2 31548 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr8-2023 chr8 102480963 102481173 + 11.1 0.000 Intergenic Intergenic -68368 NM_015902 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr13-1807 chr13 38193258 38193468 + 11.1 0.000 Intergenic Intergenic -50131 NR_047500 100874188 Hs.569249 NR_047500 ENSG00000223685 LINC00571 - long intergenic non-protein coding RNA 571 ncRNA chrX-919 chrX 16882811 16883021 + 11.1 0.000 Intergenic LTR105_Mam|LTR|ERVL -12554 NM_002893 5931 Hs.495755 NM_002893 ENSG00000102054 RBBP7 RbAp46 RB binding protein 7, chromatin remodeling factor protein-coding chr11-5831 chr11 8366018 8366228 + 11.1 0.000 Intergenic L2c|LINE|L2 -97336 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr19-4652 chr19 16273043 16273253 + 11.1 0.000 Intergenic Intergenic -51678 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr19-3111 chr19 11577339 11577549 + 11.1 0.000 intron (NM_001111034, intron 2 of 5) intron (NM_001111034, intron 2 of 5) 201 NM_001611 54 Hs.1211 NM_001611 ENSG00000102575 ACP5 HPAP|TRACP5a|TRACP5b|TRAP|TrATPase acid phosphatase 5, tartrate resistant protein-coding chr18-1319 chr18 74507969 74508179 + 11.1 0.000 intron (NM_001370250, intron 4 of 11) intron (NM_001370250, intron 4 of 11) 8486 NM_001168499 55748 Hs.149185 NM_018235 ENSG00000133313 CNDP2 CN2|CPGL|HEL-S-13|HsT2298|PEPA carnosine dipeptidase 2 protein-coding chr16-3265 chr16 88395776 88395986 + 11.1 0.000 Intergenic Intergenic -31590 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr11-6146 chr11 42018337 42018547 + 11.1 0.000 intron (NR_135065, intron 8 of 9) intron (NR_135065, intron 8 of 9) 67016 NR_135065 101928591 Hs.149771 NR_135065 LINC02745 - long intergenic non-protein coding RNA 2745 ncRNA chr4-1835 chr4 114787097 114787307 + 11.1 0.000 Intergenic AluY|SINE|Alu 130443 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chr3-4212 chr3 133989828 133990038 + 11.1 0.000 intron (NM_005630, intron 1 of 13) intron (NM_005630, intron 1 of 13) 39992 NM_005630 6578 Hs.518270 NM_005630 ENSG00000174640 SLCO2A1 MATR1|OATP2A1|PGT|PHOAR2|SLC21A2 solute carrier organic anion transporter family member 2A1 protein-coding chr14-2649 chr14 69107562 69107772 + 11.1 0.000 intron (NM_003861, intron 5 of 8) intron (NM_003861, intron 5 of 8) 44932 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr11-9182 chr11 35927102 35927312 + 11.1 0.000 Intergenic Intergenic -16774 NM_001304263 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr6-1234 chr6 138795868 138796078 + 11.1 0.000 promoter-TSS (NM_001195037) promoter-TSS (NM_001195037) -138 NM_001195037 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr11-2850 chr11 5690950 5691160 + 11.1 0.000 intron (NM_001199573, intron 1 of 7) intron (NM_001199573, intron 1 of 7) 1265 NM_006074 10346 Hs.501778 NM_006074 ENSG00000132274 TRIM22 GPSTAF50|RNF94|STAF50 tripartite motif containing 22 protein-coding chr2-3389 chr2 26404772 26404982 + 11.1 0.000 intron (NM_145038, intron 1 of 16) ERV3-16A3_I-int|LTR|ERVL 2957 NM_145038 92749 Hs.393714 NM_145038 ENSG00000157856 DRC1 C2orf39|CCDC164|CILD21 dynein regulatory complex subunit 1 protein-coding chr9-3349 chr9 110555944 110556154 + 11.1 0.000 intron (NM_153366, intron 1 of 47) intron (NM_153366, intron 1 of 47) 23692 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr9-1746 chr9 129146048 129146258 + 11.1 0.000 intron (NM_178001, intron 10 of 10) intron (NM_178001, intron 10 of 10) 32108 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr21-1095 chr21 34076302 34076512 + 11.1 0.000 intron (NM_032476, intron 1 of 2) intron (NM_032476, intron 1 of 2) 2829 NM_006933 6526 Hs.302742 NM_006933 ENSG00000198743 SLC5A3 BCW2|SMIT|SMIT1|SMIT2 solute carrier family 5 member 3 protein-coding chr8-4213 chr8 85973435 85973645 + 11.1 0.000 Intergenic Intergenic 96128 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr4-2068 chr4 17168736 17168946 + 11.1 0.000 Intergenic Intergenic 17216 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr11-3859 chr11 75966543 75966753 + 11.1 0.000 intron (NM_003369, intron 7 of 14) L1MEf|LINE|L1 151438 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr7-5525 chr7 44937999 44938209 + 11.1 0.000 Intergenic Intergenic 40911 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr2-5556 chr2 166167501 166167711 + 11.1 0.000 intron (NR_110260, intron 2 of 11) intron (NR_110260, intron 2 of 11) -18445 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr20-2355 chr20 15248336 15248546 + 11.1 0.000 intron (NM_001351663, intron 6 of 17) L2b|LINE|L2 51601 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr6-2857 chr6 3211264 3211474 + 11.1 0.000 Intergenic Intergenic -15602 NR_038296 100507194 Hs.678053 NR_038295 ENSG00000230269 LINC02525 - long intergenic non-protein coding RNA 2525 ncRNA chr11-5510 chr11 84998956 84999166 + 11.1 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) -75640 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr8-2332 chr8 15451285 15451495 + 11.1 0.000 Intergenic MER21B|LTR|ERVL -88697 NM_178234 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr10-6352 chr10 125504658 125504868 + 11.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -69608 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr4-2940 chr4 98516164 98516374 + 11.1 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 142342 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr5-2321 chr5 60696244 60696454 + 11.1 0.000 intron (NM_001145208, intron 1 of 9) intron (NM_001145208, intron 1 of 9) 3817 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr2-7514 chr2 20401171 20401381 + 11.1 0.000 Intergenic Intergenic -45798 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr22-987 chr22 37552917 37553127 + 11.1 0.000 Intergenic Intergenic -7458 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr8-6462 chr8 61709275 61709485 + 11.1 0.000 intron (NM_001164755, intron 1 of 12) intron (NM_001164755, intron 1 of 12) 5212 NM_004318 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr5-2819 chr5 34484635 34484845 + 11.1 0.000 Intergenic MER1A|DNA|hAT-Charlie -171588 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr1-6133 chr1 164097878 164098088 + 11.1 0.000 Intergenic Intergenic -461377 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr7-5975 chr7 101589065 101589275 + 11.1 0.000 Intergenic Intergenic -20164 NR_103749 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr15-803 chr15 69394613 69394823 + 11.1 0.000 intron (NM_001104554, intron 6 of 8) intron (NM_001104554, intron 6 of 8) -19631 NM_138555 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr18-1129 chr18 3483103 3483313 + 11.1 0.000 Intergenic AluSx1|SINE|Alu 16958 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr8-3323 chr8 31593844 31594054 + 11.1 0.000 Intergenic Intergenic -45803 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr5-8284 chr5 113398217 113398427 + 11.1 0.000 intron (NM_001085377, intron 1 of 18) L1PA16|LINE|L1 36667 NM_032028 83942 Hs.519507 NM_032028 ENSG00000212122 TSSK1B FKSG81|SPOGA4|STK22D|TSK1|TSSK1 testis specific serine kinase 1B protein-coding chr19-3298 chr19 4286617 4286827 + 11.1 0.000 intron (NM_020209, intron 4 of 5) AluSc|SINE|Alu 8121 NM_020209 56961 Hs.7423 NM_020209 ENSG00000105251 SHD - Src homology 2 domain containing transforming protein D protein-coding chr10-1453 chr10 73799225 73799435 + 11.1 0.000 non-coding (NR_160292, exon 22 of 27) non-coding (NR_160292, exon 22 of 27) 2069 NR_038357 100507331 Hs.631828 NR_038357 ENSG00000272589 ZSWIM8-AS1 - ZSWIM8 antisense RNA 1 ncRNA chr8-3438 chr8 81954195 81954405 + 11.1 0.000 Intergenic L3|LINE|CR1 -112014 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr15-1744 chr15 48868630 48868840 + 11.1 0.000 intron (NM_203349, intron 5 of 11) intron (NM_203349, intron 5 of 11) -9399 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chrX-4980 chrX 116527684 116527894 + 11.1 0.000 Intergenic MER5A|DNA|hAT-Charlie -64813 NM_001017978 203413 Hs.97892 NM_001017978 ENSG00000204019 CT83 CXorf61|KK-LC-1|KKLC1 cancer/testis antigen 83 protein-coding chrX-2135 chrX 32936781 32936991 + 11.1 0.000 intron (NM_000109, intron 2 of 78) intron (NM_000109, intron 2 of 78) 191541 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr12-1979 chr12 123513562 123513772 + 11.1 0.000 intron (NM_178314, intron 2 of 6) intron (NM_178314, intron 2 of 6) 6559 NM_001319244 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr2-2997 chr2 45860256 45860466 + 11.1 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 208686 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr11-2212 chr11 62921558 62921768 + 11.1 0.000 promoter-TSS (NM_000738) promoter-TSS (NM_000738) -300 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr5-5813 chr5 177088430 177088640 + 11.1 0.000 intron (NM_213647, intron 1 of 17) intron (NM_213647, intron 1 of 17) -1015 NM_022963 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr16-1975 chr16 85498024 85498234 + 11.1 0.000 Intergenic Intergenic -113280 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr6-3279 chr6 155239901 155240111 + 11.1 0.000 intron (NR_146725, intron 6 of 8) intron (NR_146725, intron 6 of 8) 23040 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr3-6361 chr3 86937141 86937351 + 11.1 0.000 TTS (NM_016206) TTS (NM_016206) 53903 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chrX-544 chrX 4522208 4522418 + 11.1 0.000 Intergenic L1ME1|LINE|L1 111259 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr8-1612 chr8 144267438 144267648 + 11.1 0.000 intron (NM_001080514, intron 1 of 1) intron (NM_001080514, intron 1 of 1) 1090 NM_001080514 642658 Hs.553250 NM_001008271 ENSG00000260428 SCX SCXA|SCXB|bHLHa48 scleraxis bHLH transcription factor protein-coding chr3-6837 chr3 148666088 148666298 + 11.1 0.000 Intergenic Intergenic -31678 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr22-1802 chr22 32533849 32534059 + 11.1 0.000 intron (NM_003490, intron 9 of 13) intron (NM_003490, intron 9 of 13) 58717 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr4-2302 chr4 55458278 55458488 + 11.1 0.000 intron (NM_004898, intron 11 of 22) Tigger19a|DNA|TcMar-Tigger 62426 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr4-1353 chr4 1154858 1155068 + 11.1 0.000 Intergenic Intergenic 17620 NM_012445 10417 Hs.302963 NM_012445 ENSG00000159674 SPON2 DIL-1|DIL1|M-SPONDIN|MINDIN spondin 2 protein-coding chr11-4205 chr11 62332660 62332870 + 11.1 0.000 Intergenic Intergenic -4683 NM_025080 80150 Hs.535326 NM_025080 ENSG00000162174 ASRGL1 ALP|ALP1|CRASH asparaginase like 1 protein-coding chr17-2672 chr17 35128126 35128336 + 11.1 0.000 TTS (NM_018096) TTS (NM_018096) 6616 NM_017559 54752 Hs.120369 NM_017559 ENSG00000073598 FNDC8 - fibronectin type III domain containing 8 protein-coding chrX-2096 chrX 23811179 23811389 + 11.1 0.000 Intergenic Intergenic 28126 NM_002970 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr9-6921 chr9 93761393 93761603 + 11.1 0.000 Intergenic L1M5|LINE|L1 -57859 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA chr16-4677 chr16 78704327 78704537 + 11.1 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 604778 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr7-3601 chr7 30654231 30654441 + 11.1 0.000 intron (NM_001202481, intron 13 of 13) intron (NM_001202481, intron 13 of 13) 28120 NM_001883 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr20-2585 chr20 38147233 38147443 + 11.1 0.000 intron (NM_198951, intron 5 of 9) L2b|LINE|L2 17932 NM_198951 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr7-4432 chr7 114414381 114414591 + 11.1 0.000 promoter-TSS (NM_001172766) promoter-TSS (NM_001172766) -329 NM_014491 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr11-4946 chr11 66325440 66325650 + 11.1 0.000 Intergenic Intergenic -8501 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding chr2-2829 chr2 99420774 99420984 + 11.1 0.000 intron (NR_135652, intron 11 of 21) L2|LINE|L2 69138 NM_001321455 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr10-2541 chr10 60617444 60617654 + 11.1 0.000 intron (NM_001204403, intron 1 of 43) MIRb|SINE|MIR -44593 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr2-4445 chr2 190131411 190131621 + 11.1 0.000 Intergenic MER21C|LTR|ERVL -6261 NM_001042521 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding chr2-1311 chr2 42047669 42047879 + 11.1 0.000 promoter-TSS (NM_138370) promoter-TSS (NM_138370) -247 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr9-3989 chr9 12620235 12620445 + 11.1 0.000 Intergenic Intergenic -73045 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr7-1057 chr7 149196732 149196942 + 11.1 0.000 intron (NM_001303481, intron 1 of 8) intron (NM_001303481, intron 1 of 8) 1291 NM_001303481 8427 Hs.729056 NM_003575 ENSG00000170265 ZNF282 HUB1 zinc finger protein 282 protein-coding chr5-3093 chr5 39479029 39479239 + 11.1 0.000 Intergenic Intergenic -41297 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr6-3595 chr6 85278970 85279180 + 11.1 0.000 Intergenic Intergenic 111111 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr1-6132 chr1 163071719 163071929 + 11.1 0.000 promoter-TSS (NM_001113380) promoter-TSS (NM_001113380) -81 NM_001113380 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G protein signaling 4 protein-coding chr12-4068 chr12 53340026 53340236 + 11.1 0.000 intron (NM_001300837, intron 1 of 2) intron (NM_001300837, intron 1 of 2) -3777 NM_001173467 121340 Hs.209402 NM_152860 ENSG00000170374 SP7 OI11|OI12|OSX|osterix Sp7 transcription factor protein-coding chr2-5504 chr2 145344177 145344387 + 11.1 0.000 Intergenic Intergenic 676315 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr8-1937 chr8 46821456 46821666 + 11.1 0.000 Intergenic BSR/Beta|Satellite|Satellite -19325 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr9-1116 chr9 88270977 88271187 + 11.1 0.000 Intergenic L1M5|LINE|L1 -117362 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr15-1252 chr15 78368762 78368972 + 11.1 0.000 Intergenic Intergenic 28514 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr22-1059 chr22 17781796 17782006 + 11.1 0.000 Intergenic Intergenic 4611 NR_103718 200298 Hs.517397 NR_103718 ENSG00000269220 LINC00528 C22orf37 long intergenic non-protein coding RNA 528 ncRNA chr4-2735 chr4 6929545 6929755 + 11.1 0.000 intron (NM_020773, intron 2 of 13) intron (NM_020773, intron 2 of 13) 19824 NM_020773 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chrX-2866 chrX 143307599 143307809 + 11.1 0.000 Intergenic Intergenic 209771 NM_001009609 139067 Hs.447320 NM_001009609 ENSG00000189252 SPANXN3 CT11.8|SPANX-N3 SPANX family member N3 protein-coding chr6-7684 chr6 85809045 85809255 + 11.1 0.000 Intergenic L1M2|LINE|L1 -130417 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr10-5960 chr10 123204518 123204728 + 11.1 0.000 Intergenic Intergenic 50221 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr4-2332 chr4 158121206 158121416 + 11.1 0.000 Intergenic Intergenic -49441 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr6-4356 chr6 19346560 19346770 + 11.1 0.000 Intergenic Tigger5b|DNA|TcMar-Tigger -103156 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA chr12-4954 chr12 72102864 72103074 + 11.1 0.000 Intergenic LTR16A|LTR|ERVL 164124 NM_173353 121278 Hs.736576 NM_173353 ENSG00000139287 TPH2 ADHD7|NTPH tryptophan hydroxylase 2 protein-coding chr3-5717 chr3 15921352 15921562 + 11.1 0.000 Intergenic Intergenic 47686 NR_030289 693148 NR_030289 ENSG00000207815 MIR563 MIRN563|hsa-mir-563 microRNA 563 ncRNA chr10-1757 chr10 24438840 24439050 + 11.1 0.000 intron (NM_019590, intron 5 of 20) intron (NM_019590, intron 5 of 20) -10469 NM_001282769 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chrX-1640 chrX 128679954 128680164 + 11.1 0.000 Intergenic AluJb|SINE|Alu -627656 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr4-4916 chr4 123468933 123469143 + 11.1 0.000 Intergenic Intergenic 69498 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr19-2853 chr19 5392955 5393165 + 11.1 0.000 Intergenic L2a|LINE|L2 -52248 NM_130854 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr3-3835 chr3 31035952 31036162 + 11.1 0.000 Intergenic LTR105_Mam|LTR|ERVL 125730 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr21-1218 chr21 45209176 45209386 + 11.1 0.000 intron (NR_027674, intron 9 of 11) intron (NR_027674, intron 9 of 11) -25059 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr1-6761 chr1 72650145 72650355 + 11.1 0.000 Intergenic Intergenic -367711 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr17-7576 chr17 20187030 20187240 + 11.1 0.000 intron (NM_001033554, intron 1 of 5) Tigger4a|DNA|TcMar-Tigger 31063 NM_001033554 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr11-3763 chr11 46786313 46786523 + 11.1 0.000 intron (NM_001008938, intron 16 of 43) L1M4|LINE|L1 -23919 NR_003056 692108 Hs.693252 NR_003056 ENSG00000212135 SNORD67 HBII-166 small nucleolar RNA, C/D box 67 snoRNA chr11-4231 chr11 64382642 64382852 + 11.1 0.000 Intergenic L2b|LINE|L2 14145 NR_031602 100302280 NR_031602 ENSG00000221273 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA chr18-3446 chr18 67101471 67101681 + 11.1 0.000 Intergenic L2|LINE|L2 19992 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr1-5054 chr1 93988773 93988983 + 11.1 0.000 Intergenic L2b|LINE|L2 -79280 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr6-5180 chr6 129312998 129313208 + 11.1 0.000 intron (NM_000426, intron 23 of 64) intron (NM_000426, intron 23 of 64) 397074 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr8-7400 chr8 139827107 139827317 + 11.1 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -124089 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr19-2707 chr19 19546689 19546899 + 11.1 0.000 TTS (NM_153221) TTS (NM_153221) 8529 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr1-11167 chr1 239057094 239057304 + 11.1 0.000 Intergenic MER83C|LTR|ERV1 -329369 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr3-4159 chr3 124882123 124882333 + 11.1 0.000 intron (NM_001354766, intron 1 of 13) L2a|LINE|L2 5137 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr20-3663 chr20 11274158 11274368 + 11.1 0.000 promoter-TSS (NR_038972) promoter-TSS (NR_038972) -880 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr3-8408 chr3 105807062 105807272 + 11.1 0.000 intron (NR_135809, intron 3 of 18) intron (NR_135809, intron 3 of 18) 60424 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr10-1681 chr10 132363441 132363651 + 11.1 0.000 intron (NM_001143757, intron 9 of 10) intron (NM_001143757, intron 9 of 10) 26206 NM_001309474 80313 Hs.119897 NM_030626 ENSG00000148814 LRRC27 - leucine rich repeat containing 27 protein-coding chr4-2979 chr4 117105871 117106081 + 11.1 0.000 Intergenic L1MEc|LINE|L1 -20400 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr17-1901 chr17 64635892 64636102 + 11.1 0.000 intron (NM_022739, intron 1 of 18) L1MB7|LINE|L1 26310 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr9-2043 chr9 4302136 4302346 + 11.1 0.000 Intergenic Intergenic -2173 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr8-1002 chr8 133375472 133375682 + 11.1 0.000 Intergenic (GAAGGCT)n|Simple_repeat|Simple_repeat -78273 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr1-8493 chr1 150221683 150221893 + 11.1 0.000 intron (NM_001280560, intron 4 of 4) intron (NM_001280560, intron 4 of 4) 12890 NM_001136479 81611 Hs.656466 NM_030920 ENSG00000143401 ANP32E LANP-L|LANPL acidic nuclear phosphoprotein 32 family member E protein-coding chr22-2552 chr22 26432239 26432449 + 11.1 0.000 intron (NM_020437, intron 1 of 3) intron (NM_020437, intron 1 of 3) 3084 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr5-2427 chr5 120538716 120538926 + 11.1 0.000 intron (NM_001308088, intron 1 of 3) intron (NM_001308088, intron 1 of 3) 7357 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr2-3777 chr2 10405274 10405484 + 11.1 0.000 intron (NM_001258359, intron 2 of 4) intron (NM_001258359, intron 2 of 4) 36615 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr2-9533 chr2 238942057 238942267 + 11.1 0.000 Intergenic Intergenic -15893 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr7-1842 chr7 141903602 141903812 + 11.1 0.000 Intergenic Intergenic -15169 NM_001001656 130075 Hs.690171 NM_001001656 ENSG00000258083 OR9A4 - olfactory receptor family 9 subfamily A member 4 protein-coding chr9-7600 chr9 36844673 36844883 + 11.1 0.000 intron (NM_001280550, intron 6 of 6) intron (NM_001280550, intron 6 of 6) 19530 NR_039766 100616278 NR_039766 ENSG00000264922 MIR4540 - microRNA 4540 ncRNA chr18-466 chr18 43662804 43663014 + 11.1 0.000 Intergenic LTR24|LTR|ERV1 -385419 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr3-6804 chr3 145337087 145337297 + 11.1 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 731993 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr10-5664 chr10 98042635 98042845 + 11.1 0.000 Intergenic L2a|LINE|L2 -11912 NM_001206528 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr11-5868 chr11 10529702 10529912 + 11.1 0.000 intron (NM_016422, intron 3 of 5) L2c|LINE|L2 11380 NM_016422 50862 Hs.44685 NM_016422 ENSG00000110315 RNF141 RFP141|ZFP26|ZNF230 ring finger protein 141 protein-coding chr1-11170 chr1 239704230 239704440 + 11.1 0.000 intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) 14784 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr13-1262 chr13 109336777 109336987 + 11.1 0.000 Intergenic Intergenic -63814 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr11-4023 chr11 8942554 8942764 + 11.1 0.000 intron (NM_020646, intron 1 of 1) intron (NM_020646, intron 1 of 1) 374 NM_020646 56676 Hs.501852 NM_020646 ENSG00000176009 ASCL3 HASH3|SGN1|bHLHa42 achaete-scute family bHLH transcription factor 3 protein-coding chr5-1285 chr5 154610414 154610624 + 11.1 0.000 Intergenic CpG -14447 NR_036094 100422950 NR_036094 ENSG00000264760 MIR3141 mir-3141 microRNA 3141 ncRNA chr15-3498 chr15 98472745 98472955 + 11.1 0.000 intron (NM_182562, intron 4 of 6) intron (NM_182562, intron 4 of 6) 41486 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding chr10-5134 chr10 51188052 51188262 + 11.1 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) -111416 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr1-7611 chr1 1604658 1604868 + 11.1 0.000 intron (NR_147951, intron 2 of 2) intron (NR_147951, intron 2 of 2) -4628 NM_001242659 643988 Hs.528816 NM_001242659 ENSG00000228594 FNDC10 C1orf233 fibronectin type III domain containing 10 protein-coding chr18-548 chr18 43665404 43665614 + 11.1 0.000 Intergenic Intergenic -388019 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr2-2582 chr2 235171036 235171246 + 11.1 0.000 Intergenic Intergenic 143406 NM_001371306 chr3-5181 chr3 68341184 68341394 + 11.1 0.000 intron (NM_001252216, intron 2 of 4) LTR8|LTR|ERV1 -159348 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr1-4593 chr1 114821323 114821533 + 11.1 0.000 Intergenic Intergenic -33375 NM_001282541 6847 Hs.112743 NM_003176 ENSG00000198765 SYCP1 CT8|HOM-TES-14|SCP-1|SCP1 synaptonemal complex protein 1 protein-coding chr10-8369 chr10 80617901 80618111 + 11.1 0.000 intron (NM_207372, intron 6 of 6) MLT1K|LTR|ERVL-MaLR -31791 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr2-5718 chr2 215918415 215918625 + 11.1 0.000 Intergenic Intergenic -74984 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chrX-1738 chrX 40576347 40576557 + 11.1 0.000 Intergenic MamRep605|LTR?|LTR? -4518 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chr10-5153 chr10 53079047 53079257 + 11.1 0.000 Intergenic AluJr4|SINE|Alu -307452 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr1-4685 chr1 226046368 226046578 + 11.1 0.000 Intergenic MLT2B3|LTR|ERVL -16243 NM_002107 3020 Hs.533624 NM_002107 ENSG00000163041 H3F3A H3.3A|H3F3 H3 histone family member 3A protein-coding chr8-1876 chr8 22192897 22193107 + 11.1 0.000 intron (NR_033404, intron 9 of 15) intron (NR_033404, intron 9 of 15) 27630 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chrX-725 chrX 151984720 151984930 + 11.1 0.000 Intergenic Intergenic -10149 NM_004961 2564 Hs.22785 NM_004961 ENSG00000102287 GABRE - gamma-aminobutyric acid type A receptor epsilon subunit protein-coding chr7-2789 chr7 79293035 79293245 + 11.1 0.000 intron (NM_001301128, intron 1 of 20) L2a|LINE|L2 -159817 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr4-5170 chr4 157291097 157291307 + 11.1 0.000 intron (NM_001083620, intron 2 of 15) intron (NM_001083620, intron 2 of 15) 70474 NM_000826 2891 Hs.32763 NM_000826 ENSG00000120251 GRIA2 GLUR2|GLURB|GluA2|GluR-K2|HBGR2 glutamate ionotropic receptor AMPA type subunit 2 protein-coding chr10-5876 chr10 115706631 115706841 + 11.1 0.000 intron (NM_207303, intron 26 of 28) intron (NM_207303, intron 26 of 28) 488053 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr11-4379 chr11 75719623 75719833 + 11.1 0.000 intron (NM_025098, intron 1 of 5) MIRb|SINE|MIR 1890 NM_025098 80168 Hs.288568 NM_025098 ENSG00000166391 MOGAT2 DGAT2L5|DGAT2L5.|MGAT2|hDC5 monoacylglycerol O-acyltransferase 2 protein-coding chr11-6923 chr11 109625566 109625776 + 11.1 0.000 Intergenic L1MEc|LINE|L1 203481 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr2-4492 chr2 8119948 8120158 + 11.1 0.000 intron (NR_034135, intron 7 of 8) intron (NR_034135, intron 7 of 8) -143239 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr1-9218 chr1 22567167 22567377 + 11.1 0.000 intron (NM_020526, intron 1 of 16) intron (NM_020526, intron 1 of 16) 3783 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr11-3368 chr11 124799032 124799242 + 11.1 0.000 intron (NM_001352401, intron 1 of 4) intron (NM_001352401, intron 1 of 4) 1269 NM_001312919 79684 Hs.146079 NM_024631 ENSG00000120458 MSANTD2 C11orf61 Myb/SANT DNA binding domain containing 2 protein-coding chr11-4635 chr11 26188709 26188919 + 11.1 0.000 promoter-TSS (NM_001313726) promoter-TSS (NM_001313726) -309 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr17-5793 chr17 63686026 63686236 + 11.1 0.000 intron (NM_203351, intron 9 of 16) MamSINE1|SINE|tRNA-RTE 13994 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr8-1216 chr8 102123796 102124006 + 11.1 0.000 intron (NM_001040624, intron 1 of 7) CpG 433 NM_001040624 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr7-1295 chr7 30771213 30771423 + 11.1 0.000 promoter-TSS (NM_032222) promoter-TSS (NM_032222) -99 NM_032222 84182 Hs.660192 NM_032222 ENSG00000106125 MINDY4 AQP-1|AQP1|C7orf67|CHIP28|FAM188B MINDY lysine 48 deubiquitinase 4 protein-coding chr7-6598 chr7 92799103 92799313 + 11.1 0.000 intron (NM_001259, intron 2 of 7) intron (NM_001259, intron 2 of 7) 34751 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr17-2395 chr17 79966760 79966970 + 11.1 0.000 intron (NM_019020, intron 3 of 11) L1MB7|LINE|L1 -16012 NM_001271846 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr6-4930 chr6 98957660 98957870 + 11.1 0.000 Intergenic Intergenic -9759 NM_012160 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr6-2730 chr6 73557258 73557468 + 11.1 0.000 Intergenic Intergenic -36331 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr19-2157 chr19 9538672 9538882 + 11.1 0.000 promoter-TSS (NM_024106) promoter-TSS (NM_024106) 111 NR_134921 101928238 Hs.324978 NR_134920 ENSG00000278611 ZNF426-DT - ZNF426 divergent transcript ncRNA chr6-5448 chr6 158445728 158445938 + 11.1 0.000 intron (NM_020245, intron 3 of 13) L2b|LINE|L2 -90603 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr3-2117 chr3 55704686 55704896 + 11.1 0.000 intron (NR_132749, intron 14 of 17) intron (NR_132749, intron 14 of 17) -45322 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA chr3-5110 chr3 49750054 49750264 + 11.1 0.000 intron (NM_153273, intron 1 of 5) intron (NM_153273, intron 1 of 5) -26185 NM_013334 29925 Hs.567488 NM_013334 ENSG00000173540 GMPPB LGMDR19|MDDGA14|MDDGB14|MDDGC14 GDP-mannose pyrophosphorylase B protein-coding chr3-4976 chr3 14716339 14716549 + 11.1 0.000 intron (NM_001184957, intron 9 of 16) intron (NM_001184957, intron 9 of 16) 41303 NM_032137 84077 Hs.661452 NM_032137 ENSG00000131379 C3orf20 - chromosome 3 open reading frame 20 protein-coding chrX-5304 chrX 143053700 143053910 + 11.1 0.000 Intergenic L1M1|LINE|L1 27877 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr8-2751 chr8 108480430 108480640 + 11.1 0.000 intron (NR_138033, intron 9 of 9) intron (NR_138033, intron 9 of 9) 36911 NM_014673 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr5-4882 chr5 66585383 66585593 + 11.1 0.000 Intergenic L2|LINE|L2 -10905 NM_198828 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr20-2083 chr20 18807717 18807927 + 11.1 0.000 Intergenic LTR16C|LTR|ERVL -5961 NM_178483 140856 Hs.112794 NM_178483 ENSG00000132631 SCP2D1 C20orf79|HSD22|dJ1068E13.2 SCP2 sterol binding domain containing 1 protein-coding chr18-889 chr18 47751220 47751430 + 11.1 0.000 Intergenic Intergenic 179334 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr7-5284 chr7 23083787 23083997 + 11.1 0.000 Intergenic PRIMA41-int|LTR|ERV1 21811 NR_046220 100775104 NR_046220 ENSG00000230658 KLHL7-DT KLHL7-AS1|PLATAK KLHL7 divergent transcript ncRNA chr20-1620 chr20 14810602 14810812 + 11.1 0.000 intron (NM_001351663, intron 5 of 17) L1PA7|LINE|L1 118811 NR_072988 100379174 Hs.407533 NR_037841 ENSG00000235914 MACROD2-AS1 BA318C17.1|NCRNA00186 MACROD2 antisense RNA 1 ncRNA chr11-1869 chr11 335829 336039 + 11.1 0.000 Intergenic Intergenic -15074 NR_049759 10410 Hs.374650 NM_021034 ENSG00000142089 IFITM3 1-8U|DSPA2b|IP15 interferon induced transmembrane protein 3 protein-coding chr22-2627 chr22 32888142 32888352 + 11.1 0.000 intron (NM_003490, intron 4 of 13) intron (NM_003490, intron 4 of 13) 87431 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr5-7276 chr5 13900451 13900661 + 11.1 0.000 intron (NM_001369, intron 14 of 78) intron (NM_001369, intron 14 of 78) 43924 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr11-3083 chr11 19380386 19380596 + 11.1 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 29767 NM_001111018 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr1-13214 chr1 211563160 211563370 + 11.1 0.000 Intergenic Intergenic 15896 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr6-2935 chr6 26205993 26206203 + 11.1 0.000 Intergenic Intergenic 1453 NM_003545 8367 Hs.662174 NM_003545 ENSG00000276966 HIST1H4E H4/j|H4FJ histone cluster 1 H4 family member e protein-coding chr2-14612 chr2 233988473 233988683 + 11.1 0.000 intron (NM_024080, intron 21 of 25) intron (NM_024080, intron 21 of 25) -62124 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr7-4941 chr7 136942886 136943096 + 11.1 0.000 intron (NR_046103, intron 2 of 3) L3|LINE|CR1 39824 NR_030165 574443 NR_030165 ENSG00000207597 MIR490 MIRN490|hsa-mir-490|miR-490 microRNA 490 ncRNA chr13-2270 chr13 27765706 27765916 + 11.1 0.000 Intergenic Intergenic -26672 NM_145657 219409 Hs.351785 NM_145657 ENSG00000169840 GSX1 GSH1|Gsh-1 GS homeobox 1 protein-coding chr15-2211 chr15 90954044 90954254 + 11.1 0.000 promoter-TSS (NM_033544) promoter-TSS (NM_033544) -727 NM_033544 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 - RCC1 domain containing 1 protein-coding chr2-2866 chr2 171056481 171056691 + 11.1 0.000 intron (NM_001136555, intron 3 of 18) intron (NM_001136555, intron 3 of 18) 10387 NM_001136555 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr3-6256 chr3 69292498 69292708 + 11.1 0.000 intron (NM_015123, intron 4 of 22) intron (NM_015123, intron 4 of 22) 93485 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr2-2992 chr2 45238135 45238345 + 11.1 0.000 intron (NR_033831, intron 1 of 5) intron (NR_033831, intron 1 of 5) 16701 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr4-3117 chr4 168540195 168540405 + 11.1 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) 43248 NM_016081 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr1-9800 chr1 58178682 58178892 + 11.1 0.000 intron (NM_001353980, intron 1 of 5) MER58C|DNA|hAT-Charlie 71716 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr10-957 chr10 44935609 44935819 + 11.1 0.000 3' UTR (NM_001345926, exon 4 of 4) 3' UTR (NM_001345926, exon 4 of 4) 23975 NR_033842 220980 Hs.568801 NR_033842 ENSG00000224812 TMEM72-AS1 - TMEM72 antisense RNA 1 ncRNA chr16-3037 chr16 50638069 50638279 + 11.1 0.000 3' UTR (NM_033119, exon 10 of 10) 3' UTR (NM_033119, exon 10 of 10) -30681 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr5-1811 chr5 75007001 75007211 + 11.1 0.000 Intergenic Intergenic 45452 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding chr6-3485 chr6 9842575 9842785 + 11.1 0.000 Intergenic Intergenic -561822 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr19-4914 chr19 42496827 42497037 + 11.1 0.000 intron (NR_073180, intron 2 of 2) MER41B|LTR|ERV1 31549 NM_001184813 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr3-5520 chr3 196636685 196636895 + 11.1 0.000 Intergenic Intergenic -2904 NM_198565 375387 Hs.702186 NM_198565 ENSG00000174004 NRROS ELLP3030|GARPL1|LRRC33|UNQ3030 negative regulator of reactive oxygen species protein-coding chr5-4704 chr5 40573022 40573232 + 11.1 0.000 Intergenic Intergenic -106788 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr15-1775 chr15 71627214 71627424 + 11.1 0.000 intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 64220 NR_120346 101929173 Hs.680593 NR_120346 THSD4-AS2 - THSD4 antisense RNA 2 ncRNA chr3-3441 chr3 133897443 133897653 + 11.1 0.000 Intergenic Intergenic -1666 NM_016577 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr10-1929 chr10 1110189 1110399 + 11.1 0.000 intron (NM_014023, intron 11 of 13) intron (NM_014023, intron 11 of 13) -49474 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr7-3833 chr7 99673059 99673269 + 11.1 0.000 TTS (NM_001350984) TTS (NM_001350984) 6832 NM_000777 1577 Hs.571258 NM_000777 ENSG00000106258 CYP3A5 CP35|CYPIIIA5|P450PCN3|PCN3 cytochrome P450 family 3 subfamily A member 5 protein-coding chr19-3268 chr19 2676178 2676388 + 11.1 0.000 intron (NM_052847, intron 1 of 4) MLT1C|LTR|ERVL-MaLR 26411 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr19-3463 chr19 33210768 33210978 + 11.1 0.000 exon (NM_019849, exon 8 of 11) exon (NM_019849, exon 8 of 11) 14977 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr7-5415 chr7 35023984 35024194 + 11.1 0.000 intron (NM_015283, intron 1 of 21) AluY|SINE|Alu 13396 NM_001366673 23333 Hs.408623 NM_015283 ENSG00000173852 DPY19L1 - dpy-19 like C-mannosyltransferase 1 protein-coding chrX-300 chrX 130401935 130402145 + 11.1 0.000 promoter-TSS (NM_016024) promoter-TSS (NM_016024) 53 NM_016024 51634 Hs.740515 NM_016024 ENSG00000134597 RBMX2 CGI-79|Snu17 RNA binding motif protein X-linked 2 protein-coding chr4-5943 chr4 155149077 155149287 + 11.1 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -59454 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr4-2239 chr4 151014408 151014618 + 11.1 0.000 exon (NM_001199282, exon 2 of 57) exon (NM_001199282, exon 2 of 57) 754 NM_001199282 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr2-8920 chr2 182897179 182897389 + 11.1 0.000 Intergenic L2a|LINE|L2 -30647 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr9-6079 chr9 137212237 137212447 + 11.1 0.000 intron (NM_001144028, intron 2 of 13) intron (NM_001144028, intron 2 of 13) 6642 NM_001144027 27158 Hs.512564 NM_014434 ENSG00000188566 NDOR1 CIAE1|NR1|bA350O14.9 NADPH dependent diflavin oxidoreductase 1 protein-coding chr4-2814 chr4 38985617 38985827 + 11.1 0.000 intron (NM_024943, intron 5 of 6) intron (NM_024943, intron 5 of 6) 46687 NM_001303228 80008 Hs.374147 NM_024943 ENSG00000121895 TMEM156 - transmembrane protein 156 protein-coding chr1-10727 chr1 195988186 195988396 + 11.1 0.000 Intergenic MSTB|LTR|ERVL-MaLR 100424 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr1-8936 chr1 7902840 7903050 + 11.1 0.000 Intergenic Intergenic 40220 NM_001561 3604 Hs.86447 NM_001561 ENSG00000049249 TNFRSF9 4-1BB|CD137|CDw137|ILA TNF receptor superfamily member 9 protein-coding chr1-12762 chr1 71244738 71244948 + 11.1 0.000 Intergenic Intergenic 163519 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr2-7074 chr2 169419473 169419683 + 11.1 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -57044 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr7-6582 chr7 80097373 80097583 + 11.1 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -37353 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr2-8495 chr2 127612385 127612595 + 11.1 0.000 exon (NM_001080527, exon 25 of 47) exon (NM_001080527, exon 25 of 47) -33374 NM_001161415 2840 Hs.46453 NM_005291 ENSG00000144230 GPR17 - G protein-coupled receptor 17 protein-coding chr20-2246 chr20 1434959 1435169 + 11.1 0.000 Intergenic MER66C|LTR|ERV1 32628 NR_038164 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding chr3-9740 chr3 68565620 68565830 + 11.1 0.000 Intergenic L1MA8|LINE|L1 65088 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr3-7592 chr3 11807822 11808032 + 11.1 0.000 non-coding (NR_158711, exon 6 of 7) non-coding (NR_158711, exon 6 of 7) 38958 NR_135611 132001 Hs.475472 NM_138807 ENSG00000144559 TAMM41 C3orf31|RAM41|TAM41 TAM41 mitochondrial translocator assembly and maintenance homolog protein-coding chr10-5092 chr10 46104486 46104696 + 11.1 0.000 Intergenic LTR16B|LTR|ERVL -4904 NR_126580 653268 Hs.447454 NM_001077685 AGAP7P AGAP-7|AGAP7|CTGLF4|bA109G10.1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene pseudo chr8-1938 chr8 47996176 47996386 + 11.1 0.000 Intergenic HERVFH21-int|LTR|ERV1 -12150 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr2-5069 chr2 8676574 8676784 + 11.1 0.000 intron (NR_110154, intron 1 of 3) CpG 5182 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr4-796 chr4 22515482 22515692 + 11.1 0.000 TTS (NR_162129) TTS (NR_162129) 275 NR_162129 113219450 NR_162129 MIR12115 - microRNA 12115 ncRNA chr13-1463 chr13 78306794 78307004 + 11.1 0.000 intron (NR_047001, intron 3 of 5) intron (NR_047001, intron 3 of 5) 252044 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr18-791 chr18 48230563 48230773 + 11.1 0.000 intron (NM_001371285, intron 1 of 5) intron (NM_001371285, intron 1 of 5) -21633 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr9-1879 chr9 107693986 107694196 + 11.1 0.000 Intergenic Intergenic -204322 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr15-1071 chr15 94844870 94845080 + 11.1 0.000 Intergenic CpG -10388 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr5-5117 chr5 101606512 101606722 + 11.1 0.000 Intergenic MIR|SINE|MIR 689667 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr15-1940 chr15 95175065 95175275 + 11.1 0.000 Intergenic Intergenic 151930 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr6-2757 chr6 117366033 117366243 + 11.1 0.000 exon (NM_002944, exon 18 of 43) exon (NM_002944, exon 18 of 43) 59717 NM_002944 6098 Hs.1041 NM_002944 ENSG00000047936 ROS1 MCF3|ROS|c-ros-1 ROS proto-oncogene 1, receptor tyrosine kinase protein-coding chr10-3316 chr10 3217370 3217580 + 11.1 0.000 Intergenic Intergenic -44634 NM_001242307 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding chr2-7841 chr2 47391915 47392125 + 11.1 0.000 Intergenic LTR1C1|LTR|ERV1 -11047 NM_000251 4436 Hs.597656 NM_000251 ENSG00000095002 MSH2 COCA1|FCC1|HNPCC|HNPCC1|LCFS2|hMSH2 mutS homolog 2 protein-coding chr1-3065 chr1 16392774 16392984 + 11.1 0.000 intron (NM_001271869, intron 2 of 3) intron (NM_001271869, intron 2 of 3) 25637 NR_073501 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr8-5911 chr8 17665789 17665999 + 11.1 0.000 intron (NR_156437, intron 7 of 13) intron (NR_156437, intron 7 of 13) 10607 NM_001330470 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr19-982 chr19 5804046 5804256 + 11.1 0.000 Intergenic CpG -12988 NM_001161619 56931 Hs.284297 NM_020175 ENSG00000141994 DUS3L DUS3 dihydrouridine synthase 3 like protein-coding chr3-4592 chr3 187362722 187362932 + 11.1 0.000 Intergenic LTR16E1|LTR|ERVL -5558 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding chr19-3186 chr19 46404315 46404525 + 11.1 0.000 Intergenic Intergenic 9144 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr19-6804 chr19 41787357 41787567 + 11.1 0.000 Intergenic MIR3|SINE|MIR -9125 NM_001815 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr13-1115 chr13 21025666 21025876 + 11.1 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 35815 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr6-1396 chr6 114085432 114085642 + 11.1 0.000 intron (NR_125845, intron 4 of 9) L1MEd|LINE|L1 -22660 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr6-6433 chr6 98154911 98155121 + 11.1 0.000 Intergenic L1PA8|LINE|L1 130485 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr18-2961 chr18 22245230 22245440 + 11.1 0.000 Intergenic L1MC4|LINE|L1 75898 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr2-9298 chr2 222474283 222474493 + 11.1 0.000 intron (NM_001320833, intron 2 of 5) intron (NM_001320833, intron 2 of 5) 49845 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chrX-2800 chrX 134028190 134028400 + 11.1 0.000 Intergenic Charlie17a|DNA|hAT-Charlie -42649 NM_004484 2719 Hs.644108 NM_004484 ENSG00000147257 GPC3 DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1 glypican 3 protein-coding chr7-5197 chr7 11553087 11553297 + 11.1 0.000 intron (NM_015204, intron 4 of 26) intron (NM_015204, intron 4 of 26) 279006 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr4-3557 chr4 185445252 185445462 + 11.1 0.000 3' UTR (NM_152775, exon 7 of 7) 3' UTR (NM_152775, exon 7 of 7) 16023 NM_001114357 441054 Hs.549398 NM_001114357 ENSG00000205129 C4orf47 - chromosome 4 open reading frame 47 protein-coding chr21-374 chr21 15850676 15850886 + 11.1 0.000 intron (NM_001283042, intron 19 of 24) intron (NM_001283042, intron 19 of 24) 120799 NM_001283042 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr12-4736 chr12 51771015 51771225 + 11.1 0.000 intron (NM_001369788, intron 19 of 25) intron (NM_001369788, intron 19 of 25) 60797 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chr22-1744 chr22 23094172 23094382 + 11.1 0.000 intron (NM_002073, intron 1 of 2) intron (NM_002073, intron 1 of 2) 23758 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr8-2602 chr8 54569663 54569873 + 11.1 0.000 Intergenic L2b|LINE|L2 -46328 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr1-10011 chr1 85953112 85953322 + 11.1 0.000 intron (NM_152890, intron 24 of 59) MamRep1879|DNA|hAT-Tip100? 203254 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr2-8780 chr2 165822492 165822702 + 11.1 0.000 Intergenic L1MC4a|LINE|L1 -28350 NM_004482 2591 Hs.170986 NM_004482 ENSG00000115339 GALNT3 GalNAc-T3|HFTC|HFTC1|HHS polypeptide N-acetylgalactosaminyltransferase 3 protein-coding chr2-6627 chr2 239943201 239943411 + 11.1 0.000 promoter-TSS (NR_039949) promoter-TSS (NR_039949) -212 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr1-9427 chr1 33219958 33220168 + 11.1 0.000 Intergenic Intergenic -36429 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr1-1484 chr1 182839661 182839871 + 11.1 0.000 promoter-TSS (NR_148933) promoter-TSS (NR_148933) -175 NR_148933 647070 Hs.191518 NR_148933 LOC647070 - uncharacterized LOC647070 ncRNA chr7-5108 chr7 3769509 3769719 + 11.1 0.000 intron (NM_152744, intron 4 of 44) L1MD1|LINE|L1 -360071 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr9-2880 chr9 130824238 130824448 + 11.1 0.000 intron (NM_007313, intron 1 of 10) MLT2B1|LTR|ERVL -10911 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr1-11966 chr1 77536843 77537053 + 11.1 0.000 intron (NM_012093, intron 13 of 13) intron (NM_012093, intron 13 of 13) 145710 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr1-10347 chr1 154141298 154141508 + 11.1 0.000 intron (NM_001159484, intron 4 of 37) intron (NM_001159484, intron 4 of 37) 13713 NM_001159484 91181 Hs.67639 NM_207308 ENSG00000143552 NUP210L - nucleoporin 210 like protein-coding chr9-6718 chr9 6361874 6362084 + 11.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL 33604 NM_001001874 89882 Hs.351815 NM_033516 ENSG00000170777 TPD52L3 D55|NYDSP25|hD55 TPD52 like 3 protein-coding chrX-1332 chrX 134144279 134144489 + 11.1 0.000 Intergenic Intergenic 25068 NR_029852 574031 NR_029852 ENSG00000284499 MIR363 MIR-363|MIRN363|hsa-mir-363 microRNA 363 ncRNA chr3-6384 chr3 90007765 90007975 + 11.1 0.000 Intergenic Intergenic 900249 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr7-6267 chr7 135645275 135645485 + 11.1 0.000 intron (NM_015135, intron 40 of 42) intron (NM_015135, intron 40 of 42) -17134 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr4-1402 chr4 1800462 1800672 + 11.1 0.000 intron (NR_148971, intron 4 of 18) intron (NR_148971, intron 4 of 18) 7255 NM_001163213 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr7-3993 chr7 138864601 138864811 + 11.1 0.000 intron (NM_020910, intron 15 of 19) MER94|DNA|hAT-Blackjack -66510 NM_020632 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr18-2554 chr18 3297347 3297557 + 11.1 0.000 Intergenic L1PB3|LINE|L1 34733 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr1-9025 chr1 11705370 11705580 + 11.1 0.000 intron (NM_198545, intron 1 of 6) intron (NM_198545, intron 1 of 6) 13765 NM_198545 374946 Hs.632364 NM_198545 ENSG00000162490 DRAXIN AGPA3119|C1orf187|UNQ3119|neucrin dorsal inhibitory axon guidance protein protein-coding chr8-1894 chr8 24389222 24389432 + 11.1 0.000 intron (NR_125808, intron 1 of 5) L2a|LINE|L2 5042 NM_014479 27299 Hs.521459 NM_014479 ENSG00000134028 ADAMDEC1 M12.219 ADAM like decysin 1 protein-coding chr6-3694 chr6 162902232 162902442 + 11.1 0.000 intron (NM_001080379, intron 2 of 4) UCON84|Unknown|Unknown 151824 NR_110872 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr2-7102 chr2 176808902 176809112 + 11.1 0.000 Intergenic Intergenic 171253 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr9-5312 chr9 86291976 86292186 + 11.1 0.000 intron (NM_001185059, intron 26 of 26) FAM|SINE|Alu -9543 NM_030940 81689 Hs.449291 NM_030940 ENSG00000135070 ISCA1 HBLD2|ISA1|MMDS5|hIscA iron-sulfur cluster assembly 1 protein-coding chr19-3567 chr19 46975413 46975623 + 11.1 0.000 intron (NM_004491, intron 3 of 6) intron (NM_004491, intron 3 of 6) -44319 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr12-5160 chr12 102095789 102095999 + 11.1 0.000 intron (NM_024057, intron 5 of 9) intron (NM_024057, intron 5 of 9) 24220 NM_024057 79023 Hs.444276 NM_024057 ENSG00000075188 NUP37 MCPH24|p37 nucleoporin 37 protein-coding chr3-5441 chr3 177174411 177174621 + 11.1 0.000 intron (NM_001321194, intron 1 of 16) intron (NM_001321194, intron 1 of 16) 21962 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr22-2418 chr22 18959869 18960079 + 11.1 0.000 Intergenic Intergenic -10524 NR_045121 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr10-9229 chr10 132898152 132898362 + 11.1 0.000 intron (NM_001200049, intron 24 of 57) intron (NM_001200049, intron 24 of 57) 44313 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr6-2040 chr6 71407289 71407499 + 11.1 0.000 TTS (NR_121614) TTS (NR_121614) -3773 NR_029504 407029 NR_029504 ENSG00000207827 MIR30A MIRN30A|mir-30a microRNA 30a ncRNA chr14-3424 chr14 96798876 96799086 + 11.1 0.000 intron (NM_003384, intron 1 of 12) intron (NM_003384, intron 1 of 12) 1599 NM_003384 7443 Hs.422662 NM_003384 ENSG00000100749 VRK1 PCH1|PCH1A VRK serine/threonine kinase 1 protein-coding chr7-3426 chr7 149916915 149917125 + 11.1 0.000 intron (NM_001351028, intron 6 of 9) intron (NM_001351028, intron 6 of 9) 43051 NM_001367788 155066 Hs.556998 NM_145230 ENSG00000171130 ATP6V0E2 ATP6V0E2L|C7orf32 ATPase H+ transporting V0 subunit e2 protein-coding chr3-3188 chr3 185925130 185925340 + 11.1 0.000 intron (NM_004593, intron 3 of 8) intron (NM_004593, intron 3 of 8) 12779 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr7-5292 chr7 24388636 24388846 + 11.1 0.000 Intergenic Intergenic 104551 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chrX-2198 chrX 40461503 40461713 + 11.1 0.000 Intergenic Intergenic -119362 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chr13-1965 chr13 110944222 110944432 + 11.1 0.000 Intergenic Intergenic -21700 NR_126378 104355135 Hs.649708 NR_126378 LINC00431 - long intergenic non-protein coding RNA 431 ncRNA chr9-1734 chr9 125889816 125890026 + 11.1 0.000 intron (NR_024122, intron 2 of 7) CpG 141738 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr14-2323 chr14 99326122 99326332 + 11.1 0.000 Intergenic Intergenic -54030 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr13-2148 chr13 106607603 106607813 + 11.1 0.000 Intergenic L1MA9|LINE|L1 -10102 NR_051977 283483 Hs.651365 NR_051977 ENSG00000272274 LINC00551 - long intergenic non-protein coding RNA 551 ncRNA chr9-3475 chr9 12636784 12636994 + 11.1 0.000 Intergenic L2a|LINE|L2 -56496 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr16-3018 chr16 30867842 30868052 + 11.1 0.000 intron (NM_001286526, intron 5 of 5) MLT1D|LTR|ERVL-MaLR 7376 NR_039744 100616231 NR_039744 ENSG00000265991 MIR4519 - microRNA 4519 ncRNA chr1-6848 chr1 107175312 107175522 + 11.1 0.000 intron (NM_001113226, intron 1 of 6) intron (NM_001113226, intron 1 of 6) 27348 NM_001113228 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr4-1583 chr4 8242254 8242464 + 11.1 0.000 Intergenic Intergenic -27395 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr13-1460 chr13 76595924 76596134 + 11.1 0.000 Intergenic L1PA7|LINE|L1 290376 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr11-4537 chr11 119510139 119510349 + 11.1 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -85259 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr12-3083 chr12 13074458 13074668 + 11.1 0.000 intron (NM_020853, intron 10 of 12) intron (NM_020853, intron 10 of 12) 21112 NM_153823 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr22-3734 chr22 26079145 26079355 + 11.1 0.000 Intergenic Intergenic -90212 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr2-6008 chr2 85437735 85437945 + 11.1 0.000 TTS (NM_201594) TTS (NM_201594) 18909 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr4-4742 chr4 94552263 94552473 + 11.1 0.000 intron (NM_001011516, intron 3 of 9) intron (NM_001011516, intron 3 of 9) 100426 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr13-1009 chr13 20989044 20989254 + 11.1 0.000 exon (NM_014572, exon 4 of 8) exon (NM_014572, exon 4 of 8) -39721 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr1-5302 chr1 218044819 218045029 + 11.1 0.000 intron (NR_110794, intron 1 of 3) MIR|SINE|MIR 1419 NR_110794 101929631 Hs.407614 NR_110794 ENSG00000232100 LINC01653 - long intergenic non-protein coding RNA 1653 ncRNA chr1-9907 chr1 71657012 71657222 + 11.1 0.000 intron (NM_173808, intron 4 of 6) intron (NM_173808, intron 4 of 6) 179895 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr5-790 chr5 14581648 14581858 + 11.1 0.000 promoter-TSS (NM_019018) promoter-TSS (NM_019018) -39 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 OTULINL FAM105A|NET20 OTU deubiquitinase with linear linkage specificity like protein-coding chr8-2178 chr8 103109071 103109281 + 11.1 0.000 Intergenic Intergenic -11856 NR_145429 379034 Hs.591862 NR_145429 LINC01181 - long intergenic non-protein coding RNA 1181 ncRNA chrX-736 chrX 8868984 8869194 + 11.1 0.000 Intergenic Intergenic -67706 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr17-2851 chr17 28615499 28615709 + 11.1 0.000 intron (NM_001363826, intron 37 of 37) intron (NM_001363826, intron 37 of 37) -1419 NM_001174103 124923 Hs.729077 NM_144610 ENSG00000167524 RSKR SGK494 ribosomal protein S6 kinase related protein-coding chr1-10693 chr1 189532308 189532518 + 11.1 0.000 Intergenic Intergenic 943597 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr11-1348 chr11 34051993 34052203 + 11.1 0.000 intron (NM_005898, intron 1 of 18) CpG 367 NM_203364 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr19-2554 chr19 49007510 49007720 + 11.1 0.000 intron (NM_006666, intron 6 of 14) intron (NM_006666, intron 6 of 14) -2291 NR_106856 102466738 NR_106856 ENSG00000273898 MIR6798 hsa-mir-6798 microRNA 6798 ncRNA chr13-957 chr13 110298757 110298967 + 11.1 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 8295 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr16-6337 chr16 49821753 49821963 + 11.1 0.000 intron (NM_001271620, intron 1 of 7) intron (NM_001271620, intron 1 of 7) 880 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr10-5561 chr10 88661214 88661424 + 11.1 0.000 Intergenic L2a|LINE|L2 -3123 NM_001198829 8513 Hs.523130 NM_004190 ENSG00000182333 LIPF GL|HGL|HLAL lipase F, gastric type protein-coding chr13-2693 chr13 90001182 90001392 + 11.1 0.000 Intergenic Intergenic 118430 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr2-8930 chr2 185108677 185108887 + 11.1 0.000 Intergenic L1PA16|LINE|L1 58290 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA chr12-5803 chr12 19643663 19643873 + 11.1 0.000 Intergenic Intergenic 203169 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr18-2217 chr18 66029523 66029733 + 11.1 0.000 Intergenic L1MC3|LINE|L1 278616 NM_001317214 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr10-3740 chr10 118504557 118504767 + 11.1 0.000 Intergenic Intergenic 90986 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chr12-2491 chr12 77765295 77765505 + 11.1 0.000 Intergenic Intergenic -65494 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr17-5795 chr17 63815670 63815880 + 11.1 0.000 intron (NM_203499, intron 16 of 17) intron (NM_203499, intron 16 of 17) -11656 NM_002805 5705 Hs.79387 NM_002805 ENSG00000087191 PSMC5 S8|SUG-1|SUG1|TBP10|TRIP1|p45|p45/SUG proteasome 26S subunit, ATPase 5 protein-coding chr1-12064 chr1 119518394 119518604 + 11.1 0.000 Intergenic L2a|LINE|L2 11289 NM_000862 3283 Hs.364941 NM_000862 ENSG00000203857 HSD3B1 3BETAHSD|HSD3B|HSDB3|HSDB3A|SDR11E1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 protein-coding chr10-6713 chr10 124956382 124956592 + 11.1 0.000 intron (NM_017580, intron 1 of 8) AluSz|SINE|Alu 14364 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr11-5526 chr11 89044858 89045068 + 11.1 0.000 intron (NM_001143831, intron 1 of 8) intron (NM_001143831, intron 1 of 8) 3109 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr12-2490 chr12 76423263 76423473 + 11.1 0.000 promoter-TSS (NM_001319655) promoter-TSS (NM_001319655) -83 NM_001319655 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr8-4052 chr8 62214937 62215147 + 11.1 0.000 Intergenic ERVL-E-int|LTR|ERVL -33812 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr11-8115 chr11 45282083 45282293 + 11.1 0.000 intron (NM_001247987, intron 1 of 7) intron (NM_001247987, intron 1 of 7) 4153 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr17-4778 chr17 44880265 44880475 + 11.1 0.000 intron (NM_001142605, intron 7 of 26) intron (NM_001142605, intron 7 of 26) 18998 NM_001258353 9343 Hs.151787 NM_004247 ENSG00000108883 EFTUD2 MFDGA|MFDM|SNRNP116|Snrp116|Snu114|U5-116KD elongation factor Tu GTP binding domain containing 2 protein-coding chr5-4860 chr5 64448901 64449111 + 11.1 0.000 Intergenic Intergenic -57009 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr16-2155 chr16 54493122 54493332 + 11.1 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -122528 NR_134923 100996345 Hs.112680 NR_134922 ENSG00000261803 LINC02140 - long intergenic non-protein coding RNA 2140 ncRNA chr16-1466 chr16 88974961 88975171 + 11.1 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 2141 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr9-6026 chr9 135879004 135879214 + 11.1 0.000 intron (NM_015447, intron 3 of 16) intron (NM_015447, intron 3 of 16) 28437 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr20-3165 chr20 41248592 41248802 + 11.1 0.000 intron (NM_015035, intron 2 of 3) intron (NM_015035, intron 2 of 3) 51423 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr22-2837 chr22 43915554 43915764 + 11.1 0.000 Intergenic MER34A1|LTR|ERV1 -8146 NM_025225 80339 Hs.654800 NM_025225 ENSG00000100344 PNPLA3 ADPN|C22orf20|iPLA(2)epsilon patatin like phospholipase domain containing 3 protein-coding chr3-4132 chr3 119020231 119020441 + 11.1 0.000 intron (NM_001353319, intron 1 of 7) LTR81B|LTR|Gypsy 14510 NM_001353323 152404 Hs.112873 NM_152538 ENSG00000144847 IGSF11 BT-IgSF|CT119|CXADRL1|Igsf13|VSIG3 immunoglobulin superfamily member 11 protein-coding chr11-1835 chr11 67753403 67753613 + 11.1 0.000 Intergenic Intergenic 51828 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr21-1013 chr21 18460561 18460771 + 11.1 0.000 Intergenic MLT2D|LTR|ERVL -56881 NM_002772 5651 Hs.149473 NM_002772 ENSG00000154646 TMPRSS15 ENTK|PRSS7 transmembrane serine protease 15 protein-coding chr12-2376 chr12 24564090 24564300 + 11.1 0.000 Intergenic Intergenic -1704 NM_152989 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr10-2446 chr10 11826895 11827105 + 11.1 0.000 intron (NM_153256, intron 1 of 3) AluJb|SINE|Alu 3644 NM_153256 254427 Hs.435775 NM_153256 ENSG00000148426 PROSER2 C10orf47 proline and serine rich 2 protein-coding chr1-7933 chr1 169102619 169102829 + 11.1 0.000 Intergenic Intergenic -1400 NR_135799 101928596 Hs.308463 NR_135799 ENSG00000237707 LOC101928596 - uncharacterized LOC101928596 ncRNA chr17-2501 chr17 81245090 81245300 + 11.1 0.000 3' UTR (NM_001037984, exon 16 of 16) 3' UTR (NM_001037984, exon 16 of 16) 5281 NR_148426 284184 Hs.356545 NM_001086521 ENSG00000224877 NDUFAF8 C17orf89 NADH:ubiquinone oxidoreductase complex assembly factor 8 protein-coding chr11-4168 chr11 57169572 57169782 + 11.1 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -12276 NM_001005210 219527 Hs.199853 NM_001005210 ENSG00000183908 LRRC55 - leucine rich repeat containing 55 protein-coding chr1-5530 chr1 204103253 204103463 + 11.1 0.000 intron (NM_005686, intron 1 of 13) intron (NM_005686, intron 1 of 13) 30243 NM_005686 9580 Hs.201671 NM_005686 ENSG00000143842 SOX13 ICA12|Sox-13 SRY-box transcription factor 13 protein-coding chr11-5043 chr11 94941681 94941891 + 11.1 0.000 Intergenic Intergenic 31770 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chrX-2196 chrX 40380278 40380488 + 11.1 0.000 Intergenic Intergenic 117466 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr10-4096 chr10 60964565 60964775 + 11.1 0.000 intron (NM_001350906, intron 2 of 12) L3b|LINE|CR1 -19944 NM_001350905 9886 Hs.737374 NM_014836 ENSG00000072422 RHOBTB1 - Rho related BTB domain containing 1 protein-coding chr2-3687 chr2 202317596 202317806 + 11.1 0.000 Intergenic Intergenic 24650 NR_003031 692058 NR_003031 ENSG00000238317 SNORD11 HBII-95 small nucleolar RNA, C/D box 11 snoRNA chr1-10394 chr1 156576304 156576514 + 11.1 0.000 Intergenic MER34C2|LTR|ERV1 -3844 NM_178229 128239 Hs.591495 NM_178229 ENSG00000183856 IQGAP3 - IQ motif containing GTPase activating protein 3 protein-coding chr19-3744 chr19 48411021 48411231 + 11.1 0.000 intron (NM_000836, intron 3 of 12) AluSx|SINE|Alu 16251 NM_000836 2906 Hs.445015 NM_000836 ENSG00000105464 GRIN2D EB11|EIEE46|GluN2D|NMDAR2D|NR2D glutamate ionotropic receptor NMDA type subunit 2D protein-coding chr11-8693 chr11 4982816 4983026 + 11.1 0.000 Intergenic Intergenic -5270 NM_021801 56547 Hs.204732 NM_021801 ENSG00000167346 MMP26 - matrix metallopeptidase 26 protein-coding chr18-3402 chr18 61668926 61669136 + 11.1 0.000 Intergenic MER5A|DNA|hAT-Charlie -79145 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr2-4154 chr2 176582974 176583184 + 11.1 0.000 Intergenic Intergenic 17973 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chrX-966 chrX 115977552 115977762 + 11.1 0.000 Intergenic Intergenic -8546 NR_130730 642776 Hs.634316 NR_130730 ENSG00000235244 DANT2 - DXZ4 associated non-coding transcript 2, distal ncRNA chr21-643 chr21 16811817 16812027 + 11.1 0.000 Intergenic Intergenic 221685 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr2-4761 chr2 20582929 20583139 + 11.1 0.000 Intergenic Intergenic 9514 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr17-5357 chr17 30047425 30047635 + 11.1 0.000 intron (NR_026738, intron 8 of 15) ERVL-E-int|LTR|ERVL -69277 NM_001261467 84081 Hs.462663 NM_032141 ENSG00000126653 NSRP1 CCDC55|HSPC095|NSrp70 nuclear speckle splicing regulatory protein 1 protein-coding chr9-2170 chr9 129061862 129062072 + 11.1 0.000 intron (NR_138422, intron 9 of 13) (TTA)n|Simple_repeat|Simple_repeat -19144 NM_001135917 57171 Hs.21701 NM_020438 ENSG00000167130 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding chr9-1827 chr9 130158799 130159009 + 11.1 0.000 Intergenic Intergenic -13500 NM_014286 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr2-6604 chr2 235733662 235733872 + 11.1 0.000 intron (NM_001037131, intron 3 of 17) intron (NM_001037131, intron 3 of 17) -215846 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr6-2970 chr6 38115432 38115642 + 11.1 0.000 intron (NM_021943, intron 4 of 5) L2a|LINE|L2 295810 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr15-1083 chr15 45549972 45550182 + 11.1 0.000 intron (NR_022014, intron 5 of 5) HAL1ME|LINE|L1 12826 NR_145777 109617005 NR_145777 ENSG00000207516 SNORA41B - small nucleolar RNA, H/ACA box 41B snoRNA chr1-4621 chr1 156670229 156670439 + 11.1 0.000 exon (NM_006617, exon 4 of 4) exon (NM_006617, exon 4 of 4) 7073 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr11-2924 chr11 67020483 67020693 + 11.1 0.000 Intergenic L1ME3A|LINE|L1 -2205 NM_001318773 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr17-2824 chr17 16525052 16525262 + 11.1 0.000 Intergenic L1MB5|LINE|L1 -32964 NM_207387 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr2-5863 chr2 239250333 239250543 + 11.1 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -54981 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr15-820 chr15 90221335 90221545 + 11.1 0.000 exon (NM_020210, exon 7 of 15) exon (NM_020210, exon 7 of 15) 12501 NM_006384 10519 Hs.715556 NM_006384 ENSG00000185043 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 protein-coding chr8-3122 chr8 58479054 58479264 + 11.1 0.000 Intergenic Intergenic 21004 NM_000780 1581 Hs.1644 NM_000780 ENSG00000167910 CYP7A1 CP7A|CYP7|CYPVII cytochrome P450 family 7 subfamily A member 1 protein-coding chr4-6391 chr4 114281721 114281931 + 11.1 0.000 Intergenic Intergenic -302179 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr3-4487 chr3 53301211 53301421 + 11.1 0.000 intron (NM_001290207, intron 4 of 7) AluSq2|SINE|Alu 31811 NR_145715 109617024 NR_145715 ENSG00000207109 SNORD38C - small nucleolar RNA, C/D box 38C snoRNA chr3-4347 chr3 183447677 183447887 + 11.1 0.000 non-coding (NR_038301, exon 1 of 4) non-coding (NR_038301, exon 1 of 4) 131 NR_038301 100505687 Hs.551751 NR_038301 ENSG00000240024 LINC00888 - long intergenic non-protein coding RNA 888 ncRNA chr1-5608 chr1 12424138 12424348 + 11.1 0.000 intron (NM_015378, intron 65 of 69) intron (NM_015378, intron 65 of 69) -83003 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr18-1658 chr18 61827634 61827844 + 11.1 0.000 intron (NM_173557, intron 1 of 1) intron (NM_173557, intron 1 of 1) 65268 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr2-3439 chr2 102268929 102269139 + 11.1 0.000 Intergenic L2a|LINE|L2 -42468 NM_001282408 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr1-4592 chr1 112744311 112744521 + 11.1 0.000 Intergenic CpG 23849 NM_182759 284467 Hs.439116 NM_182759 ENSG00000184599 TAFA3 FAM19A3|TAFA-3 TAFA chemokine like family member 3 protein-coding chr9-6523 chr9 109440639 109440849 + 11.1 0.000 intron (NM_001145368, intron 7 of 24) L3|LINE|CR1 10640 NM_001145370 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chr13-2517 chr13 59877898 59878108 + 11.1 0.000 intron (NM_001258369, intron 21 of 26) L2c|LINE|L2 -134715 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr10-5640 chr10 96998921 96999131 + 11.1 0.000 3' UTR (NM_003061, exon 37 of 37) 3' UTR (NM_003061, exon 37 of 37) -103730 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr8-3940 chr8 43419737 43419947 + 11.1 0.000 Intergenic SVA_D|Retroposon|SVA 127400 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr7-5559 chr7 46764321 46764531 + 11.1 0.000 Intergenic MER89|LTR|ERV1 -67304 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr15-1419 chr15 58771995 58772205 + 11.1 0.000 exon (NM_001040453, exon 1 of 9) exon (NM_001040453, exon 1 of 9) 798 NM_001040450 54629 Hs.591122 NM_019092 ENSG00000128923 MINDY2 FAM63B MINDY lysine 48 deubiquitinase 2 protein-coding chr13-2677 chr13 86084823 86085033 + 11.1 0.000 Intergenic MER1B|DNA|hAT-Charlie -285509 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr7-6698 chr7 1316896 1317106 + 11.1 0.000 Intergenic AluJb|SINE|Alu 84129 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr12-4252 chr12 114316129 114316339 + 11.1 0.000 Intergenic Intergenic -74464 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr1-5217 chr1 184621472 184621682 + 11.1 0.000 3' UTR (NM_030806, exon 6 of 6) 3' UTR (NM_030806, exon 6 of 6) 133281 NR_135118 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr19-2056 chr19 5785424 5785634 + 11.1 0.000 promoter-TSS (NM_001134316) promoter-TSS (NM_001134316) -783 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chr8-2417 chr8 93531797 93532007 + 11.1 0.000 intron (NR_033858, intron 6 of 10) L4_C_Mam|LINE|RTE-X 168531 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr2-11378 chr2 212227843 212228053 + 11.1 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 198412 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr16-3382 chr16 66569354 66569564 + 11.1 0.000 intron (NM_052999, intron 1 of 3) L1M4|LINE|L1 3020 NM_181269 113540 Hs.15159 NM_052999 ENSG00000089505 CMTM1 CKLFH|CKLFH1|CKLFSF1 CKLF like MARVEL transmembrane domain containing 1 protein-coding chr9-5770 chr9 127723428 127723638 + 11.1 0.000 intron (NM_144965, intron 7 of 13) intron (NM_144965, intron 7 of 13) 7454 NM_144965 158248 Hs.642748 NM_144965 ENSG00000167094 TTC16 - tetratricopeptide repeat domain 16 protein-coding chr14-3213 chr14 73943062 73943272 + 11.1 0.000 intron (NM_152445, intron 3 of 8) L2|LINE|L2 -6767 NM_182480 51004 Hs.131555 NM_182476 ENSG00000119723 COQ6 CGI-10|CGI10|COQ10D6 coenzyme Q6, monooxygenase protein-coding chr4-7247 chr4 46492871 46493081 + 11.1 0.000 Intergenic Intergenic -102848 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr7-5106 chr7 3733660 3733870 + 11.1 0.000 intron (NM_152744, intron 4 of 44) intron (NM_152744, intron 4 of 44) -395920 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr15-2959 chr15 49693751 49693961 + 11.1 0.000 Intergenic Intergenic 72808 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr10-3681 chr10 103212291 103212501 + 11.1 0.000 Intergenic HERVH-int|LTR|ERV1 -19090 NM_001351187 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr6-2599 chr6 107579618 107579828 + 11.1 0.000 intron (NM_018013, intron 4 of 6) intron (NM_018013, intron 4 of 6) 89606 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr7-1788 chr7 80231810 80232020 + 11.1 0.000 Intergenic Intergenic 96131 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr15-1821 chr15 40038130 40038340 + 11.1 0.000 intron (NM_001309434, intron 3 of 5) intron (NM_001309434, intron 3 of 5) 946 NM_003134 6727 Hs.533732 NM_003134 ENSG00000140319 SRP14 ALURBP signal recognition particle 14 protein-coding chr1-9158 chr1 19709089 19709299 + 11.1 0.000 intron (NM_001349112, intron 12 of 14) intron (NM_001349112, intron 12 of 14) 44319 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr11-2182 chr11 8988689 8988899 + 11.1 0.000 intron (NM_020645, intron 1 of 6) intron (NM_020645, intron 1 of 6) 15207 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chr1-6421 chr1 15459597 15459807 + 11.1 0.000 intron (NM_033440, intron 2 of 7) intron (NM_033440, intron 2 of 7) 2970 NM_033440 63036 Hs.631866 NM_033440 ENSG00000142615 CELA2A ELA2A|PE-1 chymotrypsin like elastase 2A protein-coding chr7-9697 chr7 155080334 155080544 + 11.1 0.000 intron (NM_024012, intron 1 of 1) intron (NM_024012, intron 1 of 1) -8882 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chr6-3289 chr6 157775800 157776010 + 11.1 0.000 Intergenic L2|LINE|L2 -47341 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr4-5363 chr4 186389571 186389781 + 11.1 0.000 intron (NR_033900, intron 1 of 3) L1PA16|LINE|L1 111382 NR_033901 285441 Hs.481369 NR_033900 ENSG00000251165 F11-AS1 - F11 antisense RNA 1 ncRNA chr4-2938 chr4 97204733 97204943 + 11.1 0.000 Intergenic Intergenic -162088 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr11-2002 chr11 46936585 46936795 + 11.1 0.000 promoter-TSS (NM_001003676) promoter-TSS (NM_001003676) 1 NM_001278222 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr1-10977 chr1 215539853 215540063 + 11.1 0.000 Intergenic LTR57-int|LTR|ERVL -27346 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chrX-2985 chrX 37594368 37594578 + 11.1 0.000 intron (NM_198511, intron 1 of 5) intron (NM_198511, intron 1 of 5) 22812 NM_001170331 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chr6-4549 chr6 40907475 40907685 + 11.1 0.000 intron (NR_110873, intron 1 of 5) intron (NR_110873, intron 1 of 5) 115700 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr21-233 chr21 36134765 36134975 + 11.1 0.000 promoter-TSS (NM_001236) promoter-TSS (NM_001236) -209 NM_001236 874 Hs.154510 NM_001236 ENSG00000159231 CBR3 HEL-S-25|SDR21C2|hCBR3 carbonyl reductase 3 protein-coding chr21-741 chr21 40683780 40683990 + 11.1 0.000 intron (NR_073202, intron 3 of 32) intron (NR_073202, intron 3 of 32) -53118 NR_046774 100874326 Hs.679746 NR_046774 ENSG00000233756 DSCAM-IT1 zag4 DSCAM intronic transcript 1 ncRNA chr15-4858 chr15 75108171 75108381 + 11.1 0.000 Intergenic Looper|DNA|PiggyBac 64990 NM_001301104 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chr2-1569 chr2 26764067 26764277 + 11.1 0.000 promoter-TSS (NM_017877) promoter-TSS (NM_017877) -112 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr12-4705 chr12 49683258 49683468 + 11.1 0.000 intron (NM_001367835, intron 1 of 26) L2c|LINE|L2 24042 NM_001367835 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr5-5507 chr5 142385119 142385329 + 11.1 0.000 intron (NR_120664, intron 3 of 3) L1M5|LINE|L1 59931 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr8-4650 chr8 134991614 134991824 + 11.1 0.000 Intergenic Intergenic 141784 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr12-4562 chr12 28550955 28551165 + 11.1 0.000 TTS (NM_001352078) TTS (NM_001352078) -360322 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chrX-2338 chrX 63313140 63313350 + 11.1 0.000 Intergenic HERVL-int|LTR|ERVL 38087 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr9-1054 chr9 38242281 38242491 + 11.1 0.000 Intergenic SVA_F|Retroposon|SVA -150316 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr19-1897 chr19 46222144 46222354 + 11.1 0.000 Intergenic Intergenic -7493 NM_198541 374918 Hs.546554 NM_198541 ENSG00000188293 IGFL1 APRG644|UNQ644 IGF like family member 1 protein-coding chr4-1246 chr4 3857294 3857504 + 11.1 0.000 Intergenic G-rich|Low_complexity|Low_complexity 91014 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr6-4405 chr6 26544041 26544251 + 11.1 0.000 intron (NM_006353, intron 1 of 1) intron (NM_006353, intron 1 of 1) 5780 NM_006353 10473 Hs.236774 NM_006353 ENSG00000182952 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding chr5-6441 chr5 161051986 161052196 + 11.1 0.000 Intergenic Intergenic -113465 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chrX-2134 chrX 32773707 32773917 + 11.1 0.000 intron (NM_000109, intron 7 of 78) intron (NM_000109, intron 7 of 78) -132253 NR_031646 100302239 NR_031646 ENSG00000221348 MIR548F5 MIR548F-5|MIRN548F5|hsa-mir-548f-5 microRNA 548f-5 ncRNA chr8-3427 chr8 75419087 75419297 + 11.1 0.000 intron (NM_001330561, intron 1 of 11) intron (NM_001330561, intron 1 of 11) 11543 NM_001330561 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr11-4317 chr11 69587818 69588028 + 11.1 0.000 Intergenic Intergenic -53182 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr9-4641 chr9 113735132 113735342 + 11.1 0.000 Intergenic Intergenic -141045 NM_001318040 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr1-7900 chr1 155058548 155058758 + 11.1 0.000 TTS (NM_001261466) TTS (NM_001261466) -5087 NM_005227 1945 Hs.449913 NM_005227 ENSG00000243364 EFNA4 EFL4|EPLG4|LERK4 ephrin A4 protein-coding chr1-10715 chr1 193939678 193939888 + 11.1 0.000 Intergenic L1MA3|LINE|L1 635038 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr3-5848 chr3 32886570 32886780 + 11.1 0.000 intron (NM_001039111, intron 3 of 3) intron (NM_001039111, intron 3 of 3) -64969 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chrX-1306 chrX 123424524 123424734 + 11.1 0.000 intron (NM_007325, intron 11 of 15) intron (NM_007325, intron 11 of 15) 240351 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr4-3895 chr4 145331537 145331747 + 11.1 0.000 Intergenic AluJb|SINE|Alu 8777 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr13-2759 chr13 98695133 98695343 + 11.1 0.000 intron (NM_005073, intron 18 of 22) L1ME3Cz|LINE|L1 57434 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr2-14401 chr2 220513977 220514187 + 11.1 0.000 Intergenic Intergenic -607517 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr10-4154 chr10 86229004 86229214 + 11.1 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 35679 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr18-1591 chr18 39516286 39516496 + 11.1 0.000 intron (NR_024391, intron 3 of 3) AluSx1|SINE|Alu 105784 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr9-5583 chr9 113719761 113719971 + 11.1 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 125737 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr3-8823 chr3 8161865 8162075 + 11.1 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -145663 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chrX-1613 chrX 109352413 109352623 + 11.1 0.000 Intergenic Intergenic 129568 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr4-5249 chr4 169918296 169918506 + 11.1 0.000 non-coding (NR_037878, exon 5 of 5) non-coding (NR_037878, exon 5 of 5) 57501 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr1-6566 chr1 32476892 32477102 + 11.1 0.000 intron (NM_001145720, intron 2 of 3) intron (NM_001145720, intron 2 of 3) 11925 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr5-6334 chr5 134155630 134155840 + 11.1 0.000 TTS (NM_006930) TTS (NM_006930) 21215 NM_170679 6500 Hs.171626 NM_006930 ENSG00000113558 SKP1 EMC19|OCP-II|OCP2|SKP1A|TCEB1L|p19A S-phase kinase associated protein 1 protein-coding chr16-4630 chr16 72361363 72361573 + 11.1 0.000 intron (NR_126330, intron 8 of 13) MLT2F|LTR|ERVL -189018 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr15-2893 chr15 42443735 42443945 + 11.1 0.000 intron (NM_001366844, intron 7 of 19) AluSx1|SINE|Alu 13727 NM_001284306 64397 Hs.511143 NM_022473 ENSG00000103994 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding chr12-2309 chr12 123094760 123094970 + 11.1 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) 13481 NR_038290 100507091 Hs.683912 NR_038290 ENSG00000251497 PITPNM2-AS1 - PITPNM2 antisense RNA 1 ncRNA chr3-4915 chr3 192819230 192819440 + 11.1 0.000 intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) -91794 NM_004113 2257 Hs.390250 NM_004113 ENSG00000114279 FGF12 EIEE47|FGF12B|FHF1 fibroblast growth factor 12 protein-coding chrX-3646 chrX 99252152 99252362 + 11.1 0.000 Intergenic L1MA1|LINE|L1 1158016 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr13-753 chr13 50354071 50354281 + 11.1 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 173273 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr1-10739 chr1 198267968 198268178 + 11.1 0.000 intron (NM_133494, intron 5 of 9) L2c|LINE|L2 111075 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr1-4802 chr1 20058577 20058787 + 11.1 0.000 Intergenic Intergenic -11512 NM_000929 5322 Hs.319438 NM_000929 ENSG00000127472 PLA2G5 FRFB|GV-PLA2|PLA2-10|hVPLA(2) phospholipase A2 group V protein-coding chr8-2476 chr8 133560331 133560541 + 11.1 0.000 intron (NM_003033, intron 1 of 8) intron (NM_003033, intron 1 of 8) 11451 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr1-8341 chr1 54362020 54362230 + 11.1 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 44269 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr3-9902 chr3 84650607 84650817 + 11.1 0.000 intron (NR_033860, intron 19 of 20) AluJr|SINE|Alu 218863 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr8-2056 chr8 120384246 120384456 + 11.1 0.000 Intergenic Intergenic 60799 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr4-1925 chr4 82593732 82593942 + 11.1 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 27600 NR_024087 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr9-4069 chr9 122106774 122106984 + 11.1 0.000 Intergenic Intergenic -13273 NM_001139442 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr1-12170 chr1 184563619 184563829 + 11.1 0.000 intron (NM_030806, intron 3 of 5) intron (NM_030806, intron 3 of 5) 176695 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr14-2423 chr14 67167933 67168143 + 11.1 0.000 intron (NM_001024218, intron 19 of 21) MLT1B|LTR|ERVL-MaLR -21402 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding chr2-9001 chr2 194732405 194732615 + 11.1 0.000 intron (NR_110223, intron 1 of 3) L1PA7|LINE|L1 1915 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr3-3087 chr3 136018831 136019041 + 11.1 0.000 intron (NM_002718, intron 2 of 13) intron (NM_002718, intron 2 of 13) -3806 NM_181897 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr19-4346 chr19 1962914 1963124 + 11.1 0.000 intron (NM_001319, intron 1 of 11) L1MB5|LINE|L1 -8470 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr10-5108 chr10 48898689 48898899 + 11.1 0.000 intron (NM_020945, intron 45 of 61) intron (NM_020945, intron 45 of 61) 15441 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr11-1797 chr11 114295260 114295470 + 11.1 0.000 promoter-TSS (NM_006169) promoter-TSS (NM_006169) -448 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr1-8089 chr1 3801648 3801858 + 11.1 0.000 Intergenic LTR13|LTR|ERVK -5255 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 - leucine rich repeat containing 47 protein-coding chr18-2146 chr18 56861247 56861457 + 11.1 0.000 intron (NM_015285, intron 20 of 27) intron (NM_015285, intron 20 of 27) 209967 NM_052834 23335 Hs.465213 NM_015285 ENSG00000091157 WDR7 TRAG WD repeat domain 7 protein-coding chr17-5192 chr17 13635936 13636146 + 11.1 0.000 Intergenic LTR24|LTR|ERV1 -34112 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr16-1532 chr16 62037996 62038206 + 11.1 0.000 Intergenic Intergenic -1663 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr18-3326 chr18 56312397 56312607 + 11.1 0.000 Intergenic Intergenic -121240 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr15-3569 chr15 41798625 41798835 + 11.1 0.000 intron (NR_049762, intron 2 of 28) intron (NR_049762, intron 2 of 28) 24246 NR_049762 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr1-2700 chr1 214558067 214558277 + 11.1 0.000 Intergenic Intergenic -6570 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr18-638 chr18 29271519 29271729 + 11.1 0.000 Intergenic Intergenic -1027286 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr2-7468 chr2 15003456 15003666 + 11.1 0.000 Intergenic L2a|LINE|L2 370844 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr2-5125 chr2 21582157 21582367 + 11.1 0.000 Intergenic L1PA7|LINE|L1 128390 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr22-3437 chr22 39835095 39835305 + 11.1 0.000 intron (NM_152512, intron 4 of 6) L1MD2|LINE|L1 58560 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr5-2709 chr5 103808569 103808779 + 11.1 0.000 Intergenic Intergenic -245885 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr17-1563 chr17 17994531 17994741 + 11.1 0.000 intron (NM_031294, intron 7 of 13) intron (NM_031294, intron 7 of 13) 21774 NM_001130091 83450 Hs.579264 NM_031294 ENSG00000171962 DRC3 CFAP134|LRRC48 dynein regulatory complex subunit 3 protein-coding chr22-2288 chr22 36263518 36263728 + 11.1 0.000 intron (NM_145343, intron 6 of 6) MER77B|LTR|ERVL 10490 NM_003661 8542 Hs.114309 NM_003661 ENSG00000100342 APOL1 APO-L|APOL|APOL-I|FSGS4 apolipoprotein L1 protein-coding chr9-4483 chr9 34975666 34975876 + 11.1 0.000 intron (NM_015297, intron 3 of 7) Charlie15a|DNA|hAT-Charlie 13608 NR_109756 101926900 Hs.545814 NR_109756 ENSG00000281491 DNAJB5-DT DNAJB5-AS1 DNAJB5 divergent transcript ncRNA chr5-4880 chr5 66508636 66508846 + 11.1 0.000 intron (NR_105001, intron 2 of 2) intron (NR_105001, intron 2 of 2) 2863 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr6-4868 chr6 88380285 88380495 + 11.1 0.000 Intergenic Intergenic 158979 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr6-3178 chr6 126548310 126548520 + 11.1 0.000 Intergenic Intergenic 63784 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr16-4067 chr16 1800031 1800241 + 11.1 0.000 Intergenic AluJb|SINE|Alu -5228 NR_027389 3483 Hs.839 NM_004970 ENSG00000099769 IGFALS ACLSD|ALS insulin like growth factor binding protein acid labile subunit protein-coding chr4-2985 chr4 118730755 118730965 + 11.1 0.000 intron (NM_014822, intron 21 of 22) intron (NM_014822, intron 21 of 22) 45468 NM_020961 57721 Hs.596872 NM_020961 ENSG00000145388 METTL14 hMETTL14 methyltransferase like 14 protein-coding chr12-1475 chr12 8035406 8035616 + 11.1 0.000 intron (NM_018416, intron 1 of 10) intron (NM_018416, intron 1 of 10) 2795 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr2-8333 chr2 108281246 108281456 + 11.1 0.000 Intergenic Intergenic -7544 NM_176825 6819 Hs.436123 NM_001056 ENSG00000198203 SULT1C2 ST1C1|ST1C2|SULT1C1|humSULTC2 sulfotransferase family 1C member 2 protein-coding chr7-2582 chr7 129108475 129108685 + 11.1 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -17691 NR_002144 407835 Hs.592273 NR_002144 LOC407835 - mitogen-activated protein kinase kinase 2 pseudogene pseudo chr1-5032 chr1 85329140 85329350 + 11.1 0.000 intron (NM_001134445, intron 5 of 6) intron (NM_001134445, intron 5 of 6) -52613 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr11-909 chr11 68870309 68870519 + 11.1 0.000 Intergenic AluYc|SINE|Alu -28483 NM_001031847 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr11-6137 chr11 40807429 40807639 + 11.1 0.000 intron (NM_020929, intron 1 of 4) intron (NM_020929, intron 1 of 4) -514404 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr5-4198 chr5 114070571 114070781 + 11.1 0.000 Intergenic Intergenic -291394 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr20-1365 chr20 39822811 39823021 + 11.1 0.000 Intergenic Intergenic -181545 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr20-758 chr20 34558593 34558803 + 11.1 0.000 promoter-TSS (NM_032514) promoter-TSS (NM_032514) -20 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr17-2642 chr17 13053517 13053727 + 11.1 0.000 Intergenic AluSx|SINE|Alu -35558 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr2-7963 chr2 63479866 63480076 + 11.1 0.000 intron (NR_148704, intron 7 of 18) L1PB1|LINE|L1 -41964 NM_001042692 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr19-3817 chr19 8236945 8237155 + 11.1 0.000 intron (NM_024552, intron 2 of 11) intron (NM_024552, intron 2 of 11) 27680 NM_024552 79603 Hs.515111 NM_024552 ENSG00000090661 CERS4 LASS4|Trh1 ceramide synthase 4 protein-coding chr3-5497 chr3 194073653 194073863 + 11.1 0.000 Intergenic AluSx|SINE|Alu -2788 NR_136180 285389 Hs.157102 NR_136179 ENSG00000230102 LINC02028 - long intergenic non-protein coding RNA 2028 ncRNA chr1-3235 chr1 184792818 184793028 + 11.1 0.000 3' UTR (NM_052966, exon 14 of 14) 3' UTR (NM_052966, exon 14 of 14) -38065 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr3-6185 chr3 60423261 60423471 + 11.1 0.000 intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) 194504 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr9-1712 chr9 107251803 107252013 + 11.1 0.000 Intergenic L3|LINE|CR1 -31371 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr9-5432 chr9 96646593 96646803 + 11.1 0.000 intron (NM_153698, intron 4 of 5) MLT1J1|LTR|ERVL-MaLR 8619 NM_153698 195827 Hs.44640 NM_153698 ENSG00000158122 PRXL2C AAED1|C9orf21 peroxiredoxin like 2C protein-coding chr2-7867 chr2 52075006 52075216 + 11.1 0.000 intron (NR_135237, intron 7 of 10) intron (NR_135237, intron 7 of 10) -295537 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr4-2930 chr4 94410827 94411037 + 11.1 0.000 Intergenic Intergenic -40925 NM_001256425 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr1-2587 chr1 45521668 45521878 + 11.1 0.000 5' UTR (NM_002574, exon 1 of 6) 5' UTR (NM_002574, exon 1 of 6) 111 NM_181697 5052 Hs.180909 NM_002574 ENSG00000117450 PRDX1 MSP23|NKEF-A|NKEFA|PAG|PAGA|PAGB|PRX1|PRXI|TDPX2 peroxiredoxin 1 protein-coding chr17-2479 chr17 73584244 73584454 + 11.1 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 60096 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chr1-6298 chr1 1524977 1525187 + 11.1 0.000 intron (NM_001170536, intron 11 of 15) intron (NM_001170536, intron 11 of 15) 12552 NM_001170536 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr13-773 chr13 26679519 26679729 + 11.1 0.000 intron (NM_006646, intron 7 of 9) intron (NM_006646, intron 7 of 9) 81162 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr21-1030 chr21 23408705 23408915 + 11.1 0.000 Intergenic Intergenic -23975 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA chr2-2889 chr2 216081600 216081810 + 11.1 0.000 promoter-TSS (NM_001142312) promoter-TSS (NM_001142312) 104 NM_018441 55825 Hs.281680 NM_018441 ENSG00000115425 PECR DCRRP|HPDHASE|HSA250303|PVIARL|SDR29C1|TERP peroxisomal trans-2-enoyl-CoA reductase protein-coding chr8-4270 chr8 94059410 94059620 + 11.1 0.000 Intergenic Intergenic 142568 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr4-2170 chr4 100063346 100063556 + 11.1 0.000 Intergenic Intergenic 112957 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chr12-1381 chr12 78097055 78097265 + 11.1 0.000 intron (NM_001024383, intron 12 of 39) intron (NM_001024383, intron 12 of 39) 262586 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr9-1689 chr9 91361880 91362090 + 11.1 0.000 promoter-TSS (NM_001351433) promoter-TSS (NM_001351433) -16 NM_001306190 549 Hs.175905 NM_001698 ENSG00000148090 AUH - AU RNA binding methylglutaconyl-CoA hydratase protein-coding chr14-1790 chr14 105065563 105065773 + 11.1 0.000 promoter-TSS (NM_013345) promoter-TSS (NM_013345) -238 NM_001278694 29933 Hs.532504 NM_013345 ENSG00000183484 GPR132 G2A G protein-coupled receptor 132 protein-coding chr16-2427 chr16 76913149 76913359 + 11.1 0.000 Intergenic Intergenic 44318 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr2-4187 chr2 191657941 191658151 + 11.1 0.000 Intergenic Intergenic -20026 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr6-4948 chr6 101979123 101979333 + 11.1 0.000 intron (NM_001166247, intron 13 of 16) L2|LINE|L2 580243 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr2-5782 chr2 225120312 225120522 + 11.1 0.000 Intergenic LTR16B|LTR|ERVL -77949 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr2-3680 chr2 190838611 190838821 + 11.1 0.000 Intergenic Intergenic -42105 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr20-894 chr20 37474702 37474912 + 11.1 0.000 Intergenic Intergenic 45496 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr8-7231 chr8 127561503 127561713 + 11.1 0.000 Intergenic L2c|LINE|L2 -79469 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr10-1143 chr10 71889230 71889440 + 11.1 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -38084 NM_002778 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr1-7781 chr1 43598968 43599178 + 11.1 0.000 intron (NM_001329140, intron 12 of 30) intron (NM_001329140, intron 12 of 30) -51076 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr16-2386 chr16 67499276 67499486 + 11.1 0.000 Intergenic Intergenic -15568 NM_001138 181 Hs.104633 NM_001138 ENSG00000159723 AGRP AGRT|ART|ASIP2 agouti related neuropeptide protein-coding chr4-1869 chr4 188714892 188715102 + 11.1 0.000 Intergenic Intergenic -61660 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr2-6744 chr2 36442049 36442259 + 11.1 0.000 intron (NM_016441, intron 3 of 16) intron (NM_016441, intron 3 of 16) 86376 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr22-2007 chr22 30628244 30628454 + 11.1 0.000 Intergenic AluSx|SINE|Alu -7432 NM_001318371 339665 Hs.660384 NM_001001479 ENSG00000100036 SLC35E4 - solute carrier family 35 member E4 protein-coding chr2-6876 chr2 81356718 81356928 + 11.1 0.000 Intergenic Intergenic 110123 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr5-1007 chr5 95812004 95812214 + 11.1 0.000 Intergenic HAL1|LINE|L1 10617 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr1-8487 chr1 147032550 147032760 + 11.1 0.000 intron (NR_024442, intron 1 of 5) intron (NR_024442, intron 1 of 5) 10384 NR_024442 728989 Hs.537068 NR_024442 LOC728989 - phosphodiesterase 4D interacting protein pseudogene pseudo chr1-4079 chr1 218209349 218209559 + 11.1 0.000 Intergenic Intergenic -75839 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr6-5276 chr6 138913827 138914037 + 11.1 0.000 intron (NM_031922, intron 15 of 19) intron (NM_031922, intron 15 of 19) 74329 NM_031922 85021 Hs.334603 NM_031922 ENSG00000135597 REPS1 NBIA7|RALBP1 RALBP1 associated Eps domain containing 1 protein-coding chr1-5093 chr1 113871700 113871910 + 11.1 0.000 promoter-TSS (NM_001193431) promoter-TSS (NM_001193431) -46 NM_001193431 26191 Hs.535276 NM_012411 ENSG00000134242 PTPN22 LYP|LYP1|LYP2|PEP|PTPN22.5|PTPN22.6|PTPN8 protein tyrosine phosphatase non-receptor type 22 protein-coding chr11-3123 chr11 37788665 37788875 + 11.1 0.000 Intergenic L1PB1|LINE|L1 -149831 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr16-1959 chr16 68023249 68023459 + 11.1 0.000 promoter-TSS (NM_001271762) promoter-TSS (NM_001271762) 70 NM_001271763 54920 Hs.534460 NM_017803 ENSG00000167264 DUS2 DUS2L|SMM1|URLC8 dihydrouridine synthase 2 protein-coding chr2-6747 chr2 37284594 37284804 + 11.1 0.000 intron (NM_005813, intron 5 of 17) intron (NM_005813, intron 5 of 17) 32385 NM_005813 23683 Hs.660757 NM_005813 ENSG00000115825 PRKD3 EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU protein kinase D3 protein-coding chr3-2693 chr3 53140000 53140210 + 11.1 0.000 Intergenic Intergenic -9670 NM_052859 91869 Hs.631910 NM_052859 ENSG00000163933 RFT1 CDG1N RFT1 homolog protein-coding chr8-3717 chr8 20550182 20550392 + 11.1 0.000 Intergenic Intergenic 64639 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr16-5049 chr16 66345939 66346149 + 11.1 0.000 Intergenic Intergenic -20647 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr1-10734 chr1 197268114 197268324 + 11.1 0.000 promoter-TSS (NM_201253) promoter-TSS (NM_201253) 15 NM_001257966 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chrX-2499 chrX 93295766 93295976 + 11.1 0.000 Intergenic L1M1|LINE|L1 377707 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr17-1551 chr17 3854183 3854393 + 11.1 0.000 Intergenic SVA_D|Retroposon|SVA -8042 NM_001114118 55421 Hs.120963 NM_018553 ENSG00000074356 NCBP3 C17orf85|ELG|HSA277841 nuclear cap binding subunit 3 protein-coding chr10-5751 chr10 102957867 102958077 + 11.1 0.000 intron (NM_199076, intron 1 of 6) AluSp|SINE|Alu -39637 NR_160733 107984265 NR_160733 LOC107984265 - uncharacterized LOC107984265 ncRNA chr6-942 chr6 143575513 143575723 + 11.1 0.000 Intergenic Intergenic -6279 NR_027113 285740 Hs.432656 NR_027113 ENSG00000235740 PHACTR2-AS1 - PHACTR2 antisense RNA 1 ncRNA chr3-2351 chr3 150865319 150865529 + 11.1 0.000 Intergenic Intergenic 40015 NM_001351281 646951 Hs.380222 NM_001351281 MINDY4B C3orf76|FAM188B2 MINDY family member 4B protein-coding chr12-5805 chr12 20350640 20350850 + 11.1 0.000 Intergenic Intergenic -18500 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr6-4471 chr6 35838426 35838636 + 11.1 0.000 intron (NM_003137, intron 14 of 15) intron (NM_003137, intron 14 of 15) 33179 NM_182548 222662 Hs.367947 NM_182548 ENSG00000197753 LHFPL5 DFNB67|TMHS|dJ510O8.8 LHFPL tetraspan subfamily member 5 protein-coding chr1-10389 chr1 156399470 156399680 + 11.1 0.000 Intergenic Intergenic 20854 NR_029691 407046 NR_029691 ENSG00000207933 MIR9-1 MIRN9-1|hsa-mir-9-1|miRNA9-1|mir-9-1 microRNA 9-1 ncRNA chr5-4899 chr5 67985891 67986101 + 11.1 0.000 Intergenic Intergenic 192783 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA chr3-4268 chr3 150783396 150783606 + 11.1 0.000 Intergenic L2b|LINE|L2 -20332 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding chr20-1658 chr20 31770386 31770596 + 11.1 0.000 intron (NM_012112, intron 6 of 17) intron (NM_012112, intron 6 of 17) 31201 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr3-2864 chr3 42408795 42409005 + 11.1 0.000 intron (NM_144634, intron 1 of 4) MER20|DNA|hAT-Charlie 1710 NM_144634 131375 Hs.234895 NM_144634 ENSG00000157093 LYZL4 LYC4|LYZA lysozyme like 4 protein-coding chr16-1361 chr16 902005 902215 + 11.1 0.000 intron (NR_147885, intron 4 of 11) intron (NR_147885, intron 4 of 11) -18923 NR_110946 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr3-6160 chr3 57960136 57960346 + 11.1 0.000 Intergenic Intergenic -48181 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr19-5904 chr19 48016031 48016241 + 11.1 0.000 intron (NM_022142, intron 4 of 6) intron (NM_022142, intron 4 of 6) 21504 NM_022142 64100 Hs.104894 NM_022142 ENSG00000169393 ELSPBP1 E12|EDDM12|EL149|HE12 epididymal sperm binding protein 1 protein-coding chr10-3638 chr10 97781674 97781884 + 11.1 0.000 Intergenic Intergenic -9780 NM_003015 6425 Hs.279565 NM_003015 ENSG00000120057 SFRP5 SARP3 secreted frizzled related protein 5 protein-coding chr6-2297 chr6 99746393 99746603 + 11.1 0.000 Intergenic Intergenic 139724 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr14-3753 chr14 45296549 45296759 + 11.1 0.000 Intergenic Intergenic -43452 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding chr16-1443 chr16 68510145 68510355 + 11.1 0.000 Intergenic CpG -28963 NM_001305204 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr4-2190 chr4 118870118 118870328 + 11.1 0.000 intron (NM_001286754, intron 1 of 4) intron (NM_001286754, intron 1 of 4) -18618 NM_001286755 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr3-2419 chr3 196187095 196187305 + 11.1 0.000 Intergenic Intergenic 24200 NR_135617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr2-4629 chr2 166672101 166672311 + 11.1 0.000 Intergenic L2c|LINE|L2 -185235 NR_045628 6332 Hs.596087 NM_002976 ENSG00000136546 SCN7A NaG|Nav2.1|Nav2.2|SCN6A sodium voltage-gated channel alpha subunit 7 protein-coding chr21-508 chr21 32728456 32728666 + 11.1 0.000 promoter-TSS (NM_001160306) promoter-TSS (NM_001160306) 447 NR_038879 100506215 Hs.657123 NR_038879 ENSG00000238197 PAXBP1-AS1 GCFC1-AS1 PAXBP1 antisense RNA 1 ncRNA chr11-5561 chr11 101224954 101225164 + 11.1 0.000 Intergenic L1M2c|LINE|L1 -95246 NM_000926 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr1-7006 chr1 169141382 169141592 + 11.1 0.000 intron (NR_104229, intron 12 of 12) intron (NR_104229, intron 12 of 12) 34797 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr19-7019 chr19 49846434 49846644 + 11.1 0.000 intron (NR_040037, intron 2 of 3) AluJb|SINE|Alu -4166 NM_001364749 53635 Hs.587979 NM_017432 ENSG00000104960 PTOV1 ACID2|PTOV-1 PTOV1 extended AT-hook containing adaptor protein protein-coding chr2-5275 chr2 62424158 62424368 + 11.1 0.000 Intergenic L3|LINE|CR1 81932 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr13-2144 chr13 105173975 105174185 + 11.1 0.000 Intergenic L1MA9|LINE|L1 -291787 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr2-2850 chr2 150681580 150681790 + 11.1 0.000 Intergenic LTR26|LTR|ERV1 52788 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr15-1679 chr15 50583302 50583512 + 11.1 0.000 intron (NR_149154, intron 27 of 37) intron (NR_149154, intron 27 of 37) -36741 NM_203494 373509 Hs.677758 NM_203494 ENSG00000170236 USP50 - ubiquitin specific peptidase 50 protein-coding chr15-2206 chr15 90592625 90592835 + 11.1 0.000 intron (NM_001042574, intron 2 of 14) intron (NM_001042574, intron 2 of 14) 62807 NM_001042574 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr7-2452 chr7 140061159 140061369 + 11.1 0.000 intron (NR_130117, intron 1 of 10) MLT1J1|LTR|ERVL-MaLR 2457 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr11-3500 chr11 123430346 123430556 + 11.1 0.000 5' UTR (NM_001354837, exon 1 of 2) 5' UTR (NM_001354837, exon 1 of 2) 182 NM_001354837 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr2-2879 chr2 196987998 196988208 + 11.1 0.000 non-coding (NR_160034, exon 29 of 29) non-coding (NR_160034, exon 29 of 29) -61396 NM_001321100 80055 Hs.229988 NM_024989 ENSG00000197121 PGAP1 Bst1|ISPD3024|MRT42|SPG67 post-GPI attachment to proteins 1 protein-coding chr5-7686 chr5 55637064 55637274 + 11.1 0.000 intron (NM_001349385, intron 11 of 14) intron (NM_001349385, intron 11 of 14) 55884 NM_001258287 153129 Hs.742101 NM_173514 ENSG00000177058 SLC38A9 URLC11 solute carrier family 38 member 9 protein-coding chr4-5278 chr4 174989064 174989274 + 11.1 0.000 Intergenic HERVK9-int|LTR|ERVK 70811 NM_001130704 11086 Hs.126838 NM_014269 ENSG00000168594 ADAM29 CT73|svph1 ADAM metallopeptidase domain 29 protein-coding chr7-8398 chr7 45427962 45428172 + 11.1 0.000 Intergenic L1M5|LINE|L1 -146073 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr14-858 chr14 38404437 38404647 + 11.1 0.000 Intergenic L1ME2|LINE|L1 -148449 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr9-5706 chr9 124499631 124499841 + 11.1 0.000 intron (NM_004959, intron 4 of 6) intron (NM_004959, intron 4 of 6) 7663 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr1-7450 chr1 58034163 58034373 + 11.1 0.000 intron (NM_001353980, intron 1 of 5) MLT1F2|LTR|ERVL-MaLR 173687 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chrX-2890 chrX 148939852 148940062 + 11.1 0.000 intron (NM_001170628, intron 6 of 17) intron (NM_001170628, intron 6 of 17) 220866 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr9-4989 chr9 21095904 21096114 + 11.1 0.000 Intergenic MER39B|LTR|ERV1 -18067 NM_002176 3456 Hs.93177 NM_002176 ENSG00000171855 IFNB1 IFB|IFF|IFN-beta|IFNB interferon beta 1 protein-coding chr3-2931 chr3 53921402 53921612 + 11.1 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -29648 NM_021237 58515 Hs.58471 NM_021237 ENSG00000113811 SELENOK HSPC030|HSPC297|SELK selenoprotein K protein-coding chr7-4446 chr7 128217529 128217739 + 11.1 0.000 Intergenic MIR3|SINE|MIR 9762 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr10-7904 chr10 50279384 50279594 + 11.1 0.000 Intergenic Intergenic -30879 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr1-3928 chr1 91537431 91537641 + 11.1 0.000 Intergenic Intergenic 36428 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr7-5210 chr7 12369645 12369855 + 11.1 0.000 exon (NM_001346972, exon 10 of 27) exon (NM_001346972, exon 10 of 27) 34115 NM_001135924 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding chr3-6828 chr3 147846664 147846874 + 11.1 0.000 Intergenic Intergenic -231390 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr3-6876 chr3 152969278 152969488 + 11.1 0.000 Intergenic L2a|LINE|L2 134252 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr15-2173 chr15 79588418 79588628 + 11.1 0.000 Intergenic Intergenic 156007 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr12-3216 chr12 56008153 56008363 + 11.1 0.000 intron (NM_001351091, intron 1 of 8) intron (NM_001351091, intron 1 of 8) 754 NM_001351091 64375 Hs.553221 NM_022465 ENSG00000123411 IKZF4 EOS|ZNFN1A4 IKAROS family zinc finger 4 protein-coding chr2-9726 chr2 64858248 64858458 + 11.1 0.000 intron (NR_110224, intron 1 of 4) intron (NR_110224, intron 1 of 4) 5278 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr5-5792 chr5 175113551 175113761 + 11.1 0.000 Intergenic L2b|LINE|L2 -117925 NR_046113 441116 Hs.533036 NM_001004348 ENSG00000204754 LINC01951 - long intergenic non-protein coding RNA 1951 ncRNA chr12-8286 chr12 125833404 125833614 + 11.1 0.000 Intergenic Intergenic 149865 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr11-2424 chr11 13468327 13468537 + 11.1 0.000 Intergenic AluJo|SINE|Alu -5135 NM_001297741 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr10-8781 chr10 105627598 105627808 + 11.1 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 192630 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr9-3292 chr9 72557749 72557959 + 11.1 0.000 intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 36053 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr12-2437 chr12 51913763 51913973 + 11.1 0.000 intron (NM_001077401, intron 3 of 8) intron (NM_001077401, intron 3 of 8) 1485 NM_001077401 94 Hs.591026 NM_000020 ENSG00000139567 ACVRL1 ACVRLK1|ALK-1|ALK1|HHT|HHT2|ORW2|SKR3|TSR-I activin A receptor like type 1 protein-coding chr2-5144 chr2 26484773 26484983 + 11.1 0.000 intron (NM_194248, intron 11 of 46) intron (NM_194248, intron 11 of 46) -6754 NM_194322 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr3-5885 chr3 37922912 37923122 + 11.1 0.000 intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) -46387 NR_029499 407015 NR_029499 ENSG00000199075 MIR26A1 MIR26A|MIRN26A1|mir-26a-1 microRNA 26a-1 ncRNA chrX-2094 chrX 23796446 23796656 + 11.1 0.000 Intergenic Intergenic 13393 NM_002970 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr2-9600 chr2 241471821 241472031 + 11.1 0.000 intron (NM_014808, intron 18 of 26) intron (NM_014808, intron 18 of 26) -5979 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr1-4857 chr1 29505513 29505723 + 11.1 0.000 Intergenic Intergenic -155504 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr10-2853 chr10 67773123 67773333 + 11.1 0.000 Intergenic Intergenic 64951 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr11-3549 chr11 21572343 21572553 + 11.1 0.000 intron (NM_201551, intron 17 of 18) L2b|LINE|L2 -620637 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr7-6064 chr7 114020297 114020507 + 11.1 0.000 Intergenic Intergenic -65925 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr2-14466 chr2 224155886 224156096 + 11.1 0.000 Intergenic Intergenic -116672 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr12-5531 chr12 132434665 132434875 + 11.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -55381 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr16-4601 chr16 68691562 68691772 + 11.1 0.000 intron (NM_001793, intron 12 of 15) intron (NM_001793, intron 12 of 15) -45625 NM_001317185 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr11-4362 chr11 74366609 74366819 + 11.1 0.000 intron (NM_173582, intron 5 of 13) L2a|LINE|L2 31719 NM_173582 283209 Hs.26612 NM_173582 ENSG00000165434 PGM2L1 BM32A|PMMLP phosphoglucomutase 2 like 1 protein-coding chr8-742 chr8 30156124 30156334 + 11.1 0.000 promoter-TSS (NM_006571) promoter-TSS (NM_006571) -140 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr20-2427 chr20 23660506 23660716 + 11.1 0.000 Intergenic Intergenic -22656 NM_001288614 1471 Hs.304682 NM_000099 ENSG00000101439 CST3 ARMD11|HEL-S-2 cystatin C protein-coding chr4-6928 chr4 16338133 16338343 + 11.1 0.000 Intergenic Intergenic 111575 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr13-1717 chr13 94569937 94570147 + 11.1 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -20636 NM_001322185 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr1-7920 chr1 159205364 159205574 + 11.1 0.000 exon (NM_002036, exon 2 of 2) exon (NM_002036, exon 2 of 2) 594 NM_001122951 2532 Hs.153381 NM_002036 ENSG00000213088 ACKR1 CCBP1|CD234|DARC|DARC/ACKR1|Dfy|FY|GPD|GpFy|WBCQ1 atypical chemokine receptor 1 (Duffy blood group) protein-coding chr18-3106 chr18 36096904 36097114 + 11.1 0.000 Intergenic L1ME1|LINE|L1 -29415 NM_001303413 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr7-2718 chr7 33716851 33717061 + 11.1 0.000 Intergenic Intergenic -187959 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr10-5073 chr10 43736207 43736417 + 11.1 0.000 Intergenic Intergenic 42513 NR_134484 102724264 Hs.140667 NR_134483 ENSG00000234973 LINC02658 - long intergenic non-protein coding RNA 2658 ncRNA chr1-3169 chr1 88684882 88685092 + 11.1 0.000 intron (NM_001320708, intron 1 of 20) CpG 217 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr1-12909 chr1 114277912 114278122 + 11.1 0.000 Intergenic L1MC1|LINE|L1 -124148 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr2-5836 chr2 236380248 236380458 + 11.1 0.000 intron (NR_073043, intron 12 of 19) intron (NR_073043, intron 12 of 19) -116008 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr3-2734 chr3 124845670 124845880 + 11.1 0.000 intron (NM_001354766, intron 4 of 13) intron (NM_001354766, intron 4 of 13) 41590 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr9-2239 chr9 28920407 28920617 + 11.1 0.000 intron (NM_001354574, intron 2 of 5) intron (NM_001354574, intron 2 of 5) -31557 NR_030618 100126316 NR_030618 ENSG00000215939 MIR873 MIRN873|hsa-mir-873|mir-873 microRNA 873 ncRNA chr5-1894 chr5 156081363 156081573 + 11.1 0.000 Intergenic AluJo|SINE|Alu -245289 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr2-5906 chr2 7429543 7429753 + 11.1 0.000 intron (NR_038432, intron 3 of 5) LTR33A|LTR|ERVL 8387 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr12-3382 chr12 101298416 101298626 + 11.1 0.000 intron (NM_014503, intron 12 of 61) L2a|LINE|L2 18416 NM_014503 27340 Hs.295732 NM_014503 ENSG00000120800 UTP20 1A6/DRIM|DRIM UTP20 small subunit processome component protein-coding chr14-5027 chr14 79108898 79109108 + 11.1 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -90979 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr1-3352 chr1 66364970 66365180 + 11.1 0.000 intron (NM_001037339, intron 5 of 9) intron (NM_001037339, intron 5 of 9) 10540 NM_001297442 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr4-4677 chr4 85354974 85355184 + 11.1 0.000 Intergenic LTR17|LTR|ERV1 -120071 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr2-3161 chr2 197673653 197673863 + 11.1 0.000 intron (NM_144629, intron 1 of 8) intron (NM_144629, intron 1 of 8) 1829 NM_144629 130132 Hs.591615 NM_144629 ENSG00000162944 RFTN2 C2orf11|Raftlin-2 raftlin family member 2 protein-coding chr1-5821 chr1 222400341 222400551 + 11.1 0.000 Intergenic Intergenic 147658 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr3-7726 chr3 51316023 51316233 + 11.1 0.000 intron (NM_004947, intron 32 of 52) L1ME1|LINE|L1 -69163 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr3-715 chr3 195498842 195499052 + 11.1 0.000 Intergenic Intergenic 44378 NM_001291505 5504 Hs.535731 NM_006241 ENSG00000184203 PPP1R2 IPP-2|IPP2|PPP1R2A protein phosphatase 1 regulatory inhibitor subunit 2 protein-coding chr2-9377 chr2 229838147 229838357 + 11.1 0.000 intron (NM_001284216, intron 2 of 38) intron (NM_001284216, intron 2 of 38) 83427 NM_001348334 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chrX-1564 chrX 51057971 51058181 + 11.1 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 113345 NR_110382 101926971 Hs.657995 NR_110382 ENSG00000230317 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA chr5-4497 chr5 10783979 10784189 + 11.1 0.000 Intergenic AluY|SINE|Alu -22850 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr1-15980 chr1 195297127 195297337 + 11.1 0.000 Intergenic Intergenic 791483 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr10-1234 chr10 72353857 72354067 + 11.1 0.000 intron (NR_157570, intron 1 of 8) intron (NR_157570, intron 1 of 8) 957 NM_001365081 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr22-2820 chr22 43279183 43279393 + 11.1 0.000 intron (NR_134582, intron 1 of 1) intron (NR_134582, intron 1 of 1) 3346 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr9-1716 chr9 110440255 110440465 + 11.1 0.000 intron (NM_153366, intron 27 of 47) L2c|LINE|L2 -102476 NM_001286947 255220 Hs.147064 NM_001003936 ENSG00000204193 TXNDC8 SPTRX-3|SPTRX3|TRX6|bA427L11.2 thioredoxin domain containing 8 protein-coding chr16-2941 chr16 3671130 3671340 + 11.1 0.000 intron (NM_001272049, intron 10 of 16) intron (NM_001272049, intron 10 of 16) 16531 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr21-1104 chr21 34804086 34804296 + 11.1 0.000 intron (NM_001001890, intron 4 of 5) L1MCa|LINE|L1 58366 NR_038886 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA chr14-4936 chr14 74227352 74227562 + 11.1 0.000 Intergenic Intergenic -11992 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr9-3016 chr9 122913870 122914080 + 11.1 0.000 promoter-TSS (NM_006626) promoter-TSS (NM_006626) -652 NM_006626 10773 Hs.654596 NM_006626 ENSG00000186130 ZBTB6 ZID|ZNF482 zinc finger and BTB domain containing 6 protein-coding chr3-2646 chr3 14144383 14144593 + 11.1 0.000 TTS (NM_024334) TTS (NM_024334) 19548 NM_024334 79188 Hs.517817 NM_024334 ENSG00000170876 TMEM43 ARVC5|ARVD5|EDMD7|LUMA transmembrane protein 43 protein-coding chr11-3065 chr11 11992727 11992937 + 11.1 0.000 intron (NM_015881, intron 4 of 7) MSTB1|LTR|ERVL-MaLR 15807 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr19-4062 chr19 10003822 10004032 + 11.1 0.000 intron (NM_015719, intron 5 of 66) intron (NM_015719, intron 5 of 66) 6577 NM_015719 50509 Hs.235368 NM_015719 ENSG00000080573 COL5A3 - collagen type V alpha 3 chain protein-coding chr17-3543 chr17 75009316 75009526 + 11.1 0.000 Intergenic Intergenic -3249 NM_001545 3396 Hs.407955 NM_001545 ENSG00000167862 MRPL58 DS-1|DS1|ICT1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding chr4-2745 chr4 7872368 7872578 + 11.1 0.000 promoter-TSS (NM_001371090) promoter-TSS (NM_001371090) -165 NM_001371090 chr12-3522 chr12 131690591 131690801 + 11.1 0.000 Intergenic L1MC3|LINE|L1 -20394 NM_001261411 6433 Hs.308171 NM_004592 ENSG00000061936 SFSWAP SFRS8|SWAP splicing factor SWAP protein-coding chrX-3284 chrX 103464533 103464743 + 11.1 0.000 Intergenic Intergenic 54851 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chr21-240 chr21 46060581 46060791 + 11.1 0.000 Intergenic Intergenic -37426 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr8-3849 chr8 31960531 31960741 + 11.1 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -65100 NR_104158 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr1-15216 chr1 110751809 110752019 + 11.1 0.000 Intergenic Intergenic -76974 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding chr2-4741 chr2 3178436 3178646 + 11.1 0.000 Intergenic Intergenic -52515 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr7-3404 chr7 132117181 132117391 + 11.1 0.000 Intergenic Intergenic -143575 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr3-2320 chr3 129413926 129414136 + 11.1 0.000 intron (NM_207307, intron 4 of 8) Charlie20a|DNA|hAT-Charlie -14592 NR_003111 132241 Hs.477537 NR_003111 ENSG00000251474 RPL32P3 - ribosomal protein L32 pseudogene 3 pseudo chr4-5103 chr4 148224487 148224697 + 11.1 0.000 intron (NM_000901, intron 3 of 8) intron (NM_000901, intron 3 of 8) 217822 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr16-1170 chr16 84648479 84648689 + 11.1 0.000 promoter-TSS (NM_024731) promoter-TSS (NM_024731) 73 NM_024731 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr7-2003 chr7 21961014 21961224 + 11.1 0.000 Intergenic Intergenic -15220 NM_001127370 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr2-3145 chr2 187316512 187316722 + 11.1 0.000 Intergenic AluJo|SINE|Alu 131635 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr10-3060 chr10 133251706 133251916 + 11.1 0.000 Intergenic Intergenic -3926 NR_108078 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG - MIR202 host gene ncRNA chr18-1904 chr18 32041118 32041328 + 11.1 0.000 intron (NM_017831, intron 2 of 5) intron (NM_017831, intron 2 of 5) 22398 NM_017831 54941 Hs.633703 NM_017831 ENSG00000101695 RNF125 TNORS|TRAC-1|TRAC1 ring finger protein 125 protein-coding chr7-3782 chr7 84948547 84948757 + 11.1 0.000 Intergenic Intergenic 173279 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr19-1736 chr19 957068 957278 + 11.1 0.000 intron (NM_005224, intron 3 of 8) intron (NM_005224, intron 3 of 8) -27155 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr11-2750 chr11 46729310 46729520 + 11.1 0.000 exon (NM_001311257, exon 12 of 14) exon (NM_001311257, exon 12 of 14) 10202 NM_001311257 2147 Hs.655207 NM_000506 ENSG00000180210 F2 PT|RPRGL2|THPH1 coagulation factor II, thrombin protein-coding chr1-9309 chr1 26936907 26937117 + 11.1 0.000 intron (NM_006600, intron 2 of 8) MER21C|LTR|ERVL 15269 NM_006600 10726 Hs.263812 NM_006600 ENSG00000090273 NUDC HNUDC|MNUDC|NPD011 nuclear distribution C, dynein complex regulator protein-coding chr15-4327 chr15 40150457 40150667 + 11.1 0.000 Intergenic Intergenic -10447 NM_001211 701 Hs.513645 NM_001211 ENSG00000156970 BUB1B BUB1beta|BUBR1|Bub1A|MAD3L|MVA1|SSK1|hBUBR1 BUB1 mitotic checkpoint serine/threonine kinase B protein-coding chr11-1525 chr11 119340743 119340953 + 11.1 0.000 promoter-TSS (NM_001278431) promoter-TSS (NM_001278431) 35 NM_001278431 114902 Hs.632102 NM_015645 ENSG00000223953 C1QTNF5 CTRP5|MFRP C1q and TNF related 5 protein-coding chr20-2067 chr20 12224750 12224960 + 11.1 0.000 Intergenic Intergenic 306962 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr4-2530 chr4 48331934 48332144 + 11.1 0.000 Intergenic L2a|LINE|L2 -9490 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr7-2292 chr7 67019674 67019884 + 11.1 0.000 intron (NR_134540, intron 6 of 14) LTR56|LTR|ERV1 22946 NM_018264 55253 Hs.520917 NM_018264 ENSG00000198874 TYW1 RSAFD1|TYW1A|YPL207W tRNA-yW synthesizing protein 1 homolog protein-coding chrX-1208 chrX 71859654 71859864 + 11.1 0.000 Intergenic Intergenic -51329 NM_001013627 340527 Hs.397836 NM_001013627 ENSG00000204131 NHSL2 - NHS like 2 protein-coding chr4-5928 chr4 150594273 150594483 + 11.1 0.000 intron (NM_001367550, intron 38 of 56) intron (NM_001367550, intron 38 of 56) 12227 NM_006439 10586 Hs.584852 NM_006439 ENSG00000181541 MAB21L2 MCOPS14|MCSKS14 mab-21 like 2 protein-coding chr14-2721 chr14 91230661 91230871 + 11.1 0.000 Intergenic Intergenic 13938 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr1-15151 chr1 105762709 105762919 + 11.1 0.000 Intergenic MER21C|LTR|ERVL -143879 NR_125954 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr9-2002 chr9 130466724 130466934 + 11.1 0.000 intron (NM_054012, intron 6 of 14) intron (NM_054012, intron 6 of 14) 21868 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr11-2457 chr11 46209896 46210106 + 11.1 0.000 Intergenic L2c|LINE|L2 38046 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chr19-4517 chr19 7839557 7839767 + 11.1 0.000 intron (NM_001159944, intron 1 of 19) AluJr|SINE|Alu 9444 NM_145245 115704 Hs.26870 NM_145245 ENSG00000142459 EVI5L - ecotropic viral integration site 5 like protein-coding chr15-4653 chr15 64373928 64374138 + 11.1 0.000 intron (NM_001029989, intron 2 of 2) intron (NM_001029989, intron 2 of 2) 7408 NM_001029989 9768 Hs.81892 NM_014736 ENSG00000166803 PCLAF KIAA0101|L5|NS5ATP9|OEATC|OEATC-1|OEATC1|PAF|PAF15|p15(PAF)|p15/PAF|p15PAF PCNA clamp associated factor protein-coding chr8-7401 chr8 139844786 139844996 + 11.1 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -141768 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr16-2383 chr16 66925676 66925886 + 11.1 0.000 promoter-TSS (NM_004165) promoter-TSS (NM_004165) -245 NM_001128850 6236 Hs.1027 NM_004165 ENSG00000166592 RRAD RAD|RAD1|REM3 RRAD, Ras related glycolysis inhibitor and calcium channel regulator protein-coding chr1-6244 chr1 227672287 227672497 + 11.1 0.000 intron (NR_102302, intron 5 of 5) intron (NR_102302, intron 5 of 5) 25315 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo chr2-9723 chr2 63506097 63506307 + 11.1 0.000 intron (NR_148705, intron 1 of 16) Kanga11a|DNA|TcMar-Tc2 -68195 NM_001042692 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr10-2290 chr10 17423771 17423981 + 11.1 0.000 intron (NM_001004470, intron 2 of 7) intron (NM_001004470, intron 2 of 7) 30719 NM_001004470 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr14-1986 chr14 50985193 50985403 + 11.1 0.000 intron (NM_015163, intron 7 of 9) intron (NM_015163, intron 7 of 9) -40815 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr10-7844 chr10 45580511 45580721 + 11.1 0.000 intron (NM_145021, intron 1 of 6) intron (NM_145021, intron 1 of 6) 14290 NM_145021 220972 Hs.499489 NM_145021 ENSG00000165406 MARCH8 CMIR|MARCH-VIII|MIR|RNF178|c-MIR membrane associated ring-CH-type finger 8 protein-coding chrX-1008 chrX 41661551 41661761 + 11.1 0.000 intron (NM_003688, intron 7 of 26) intron (NM_003688, intron 7 of 26) -27317 NM_005300 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr1-4738 chr1 6234543 6234753 + 11.1 0.000 intron (NM_012405, intron 2 of 4) intron (NM_012405, intron 2 of 4) 1316 NM_012405 23463 Hs.515688 NM_012405 ENSG00000116237 ICMT HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT isoprenylcysteine carboxyl methyltransferase protein-coding chr14-2010 chr14 57266179 57266389 + 11.1 0.000 intron (NM_006544, intron 1 of 17) intron (NM_006544, intron 1 of 17) 2621 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding chr1-9764 chr1 55012616 55012826 + 11.1 0.000 3' UTR (NM_057176, exon 4 of 4) 3' UTR (NM_057176, exon 4 of 4) 13788 NM_057176 7809 Hs.151291 NM_057176 ENSG00000162399 BSND BART|DFNB73 barttin CLCNK type accessory beta subunit protein-coding chr11-6393 chr11 65198214 65198424 + 11.1 0.000 intron (NR_040008, intron 9 of 20) AluJo|SINE|Alu -15521 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr2-3838 chr2 28428044 28428254 + 11.1 0.000 Intergenic Intergenic -33477 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr17-1750 chr17 3914030 3914240 + 11.1 0.000 intron (NM_002558, intron 1 of 11) intron (NM_002558, intron 1 of 11) 2330 NM_002558 5023 Hs.41735 NM_002558 ENSG00000108405 P2RX1 P2X1 purinergic receptor P2X 1 protein-coding chr4-5330 chr4 182657417 182657627 + 11.1 0.000 intron (NM_001080477, intron 6 of 27) L2a|LINE|L2 259731 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr2-2125 chr2 47016133 47016343 + 11.1 0.000 intron (NM_001288951, intron 11 of 20) intron (NM_001288951, intron 11 of 20) -74383 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr7-2421 chr7 93538188 93538398 + 11.1 0.000 intron (NM_001164737, intron 2 of 15) intron (NM_001164737, intron 2 of 15) 21517 NM_001164738 799 Hs.489127 NM_001742 ENSG00000004948 CALCR CRT|CT-R|CTR|CTR1 calcitonin receptor protein-coding chr10-2043 chr10 80529222 80529432 + 11.1 0.000 TTS (NR_120661) TTS (NR_120661) 6615 NR_120661 101929574 Hs.593663 NR_120661 ENSG00000226659 LOC101929574 - uncharacterized LOC101929574 ncRNA chr12-2200 chr12 26787438 26787648 + 11.1 0.000 intron (NM_002223, intron 2 of 56) intron (NM_002223, intron 2 of 56) 45651 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr4-532 chr4 156962623 156962833 + 11.1 0.000 intron (NR_036641, intron 1 of 6) MIR|SINE|MIR 9071 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr21-597 chr21 46124417 46124627 + 11.1 0.000 intron (NM_058174, intron 21 of 27) intron (NM_058174, intron 21 of 27) 26403 NM_058175 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr8-4537 chr8 123586470 123586680 + 11.1 0.000 Intergenic LTR85a|LTR|Gypsy? -45369 NM_058229 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr5-5517 chr5 143589389 143589599 + 11.1 0.000 Intergenic MIRb|SINE|MIR -90366 NR_049829 100846991 NR_049829 ENSG00000266478 MIR5197 - microRNA 5197 ncRNA chr1-7443 chr1 51906073 51906283 + 11.1 0.000 Intergenic Intergenic -27241 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr6-5355 chr6 149267504 149267714 + 11.1 0.000 intron (NM_001292035, intron 2 of 6) Tigger3a|DNA|TcMar-Tigger -10058 NR_149096 105378049 Hs.615624 NR_149096 ENSG00000225924 TAB2-AS1 - TAB2 antisense RNA 1 ncRNA chr1-9238 chr1 23682553 23682763 + 11.1 0.000 Intergenic AluJo|SINE|Alu -9121 NM_001199802 6135 Hs.719951 NM_000975 ENSG00000142676 RPL11 DBA7|GIG34|L11|uL5 ribosomal protein L11 protein-coding chr7-6156 chr7 126559812 126560022 + 11.1 0.000 intron (NM_001371085, intron 8 of 10) intron (NM_001371085, intron 8 of 10) 498267 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr1-16020 chr1 199979354 199979564 + 11.1 0.000 Intergenic Intergenic -48251 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr3-5738 chr3 18855835 18856045 + 11.1 0.000 Intergenic L2c|LINE|L2 -292570 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr22-1491 chr22 34024593 34024803 + 11.1 0.000 Intergenic LTR79|LTR|ERVL -101810 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr1-5039 chr1 85656342 85656552 + 11.1 0.000 intron (NM_017953, intron 9 of 9) intron (NM_017953, intron 9 of 9) 51986 NM_001170670 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr17-3493 chr17 48671887 48672097 + 11.1 0.000 Intergenic Intergenic -39433 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr18-959 chr18 33210499 33210709 + 11.1 0.000 intron (NM_001308126, intron 20 of 23) intron (NM_001308126, intron 20 of 23) 229967 NM_001371121 chr8-1459 chr8 13672741 13672951 + 11.1 0.000 Intergenic Intergenic 43156 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr20-2560 chr20 36441263 36441473 + 11.1 0.000 intron (NM_001365621, intron 5 of 12) L2a|LINE|L2 -20100 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr14-1464 chr14 104885877 104886087 + 11.1 0.000 intron (NM_001112726, intron 10 of 18) intron (NM_001112726, intron 10 of 18) 20668 NR_162135 113219454 NR_162135 MIR12121 - microRNA 12121 ncRNA chr1-2469 chr1 81801917 81802127 + 11.1 0.000 promoter-TSS (NM_001366007) promoter-TSS (NM_001366007) -431 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr6-3752 chr6 11645546 11645756 + 11.1 0.000 Intergenic Intergenic 107902 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr13-3430 chr13 101585248 101585458 + 11.1 0.000 intron (NM_001271754, intron 5 of 10) intron (NM_001271754, intron 5 of 10) 95401 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr20-1197 chr20 6562104 6562314 + 11.1 0.000 Intergenic Intergenic 135477 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr12-4005 chr12 26633678 26633888 + 11.1 0.000 intron (NM_002223, intron 21 of 56) intron (NM_002223, intron 21 of 56) 199411 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr15-1919 chr15 82803875 82804085 + 11.1 0.000 intron (NM_001281805, intron 1 of 12) MIRb|SINE|MIR 2089 NM_001281805 123722 Hs.719372 NM_001007122 ENSG00000186628 FSD2 SPRYD1 fibronectin type III and SPRY domain containing 2 protein-coding chr1-8599 chr1 184191305 184191515 + 11.1 0.000 Intergenic Intergenic 139680 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr16-1302 chr16 85785981 85786191 + 11.1 0.000 intron (NM_006067, intron 2 of 4) intron (NM_006067, intron 2 of 4) -6329 NR_135193 101928557 Hs.662217 NR_135193 ENSG00000270159 LOC101928557 - uncharacterized LOC101928557 ncRNA chr9-7000 chr9 113895559 113895769 + 11.1 0.000 intron (NM_001318042, intron 1 of 14) MER117|DNA|hAT-Charlie 19355 NM_001318042 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr7-3224 chr7 152823376 152823586 + 11.1 0.000 exon (NM_020445, exon 8 of 12) exon (NM_020445, exon 8 of 12) 63729 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr9-2626 chr9 19469548 19469758 + 11.1 0.000 Intergenic Intergenic 60644 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr2-8509 chr2 128833235 128833445 + 11.1 0.000 Intergenic Intergenic -31260 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr1-8693 chr1 224128109 224128319 + 11.1 0.000 intron (NR_049764, intron 1 of 3) L2c|LINE|L2 14103 NR_049764 23219 Hs.64691 NM_015176 ENSG00000143756 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding chr2-5074 chr2 10236252 10236462 + 11.1 0.000 Intergenic Intergenic -43686 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr3-2312 chr3 126078025 126078235 + 11.1 0.000 intron (NM_001008486, intron 1 of 10) intron (NM_001008486, intron 1 of 10) 6161 NM_001008486 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chr2-5892 chr2 241075168 241075378 + 11.1 0.000 non-coding (NR_138463, exon 7 of 7) non-coding (NR_138463, exon 7 of 7) 27014 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr3-5638 chr3 10948537 10948747 + 11.1 0.000 Intergenic Intergenic -44092 NM_001348250 6529 Hs.443874 NM_003042 ENSG00000157103 SLC6A1 GABATHG|GABATR|GAT1|MAE solute carrier family 6 member 1 protein-coding chr9-1875 chr9 99385986 99386196 + 11.1 0.000 Intergenic Intergenic -10834 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr22-1871 chr22 41227217 41227427 + 11.1 0.000 exon (NM_031488, exon 14 of 17) exon (NM_031488, exon 14 of 17) -9695 NR_148200 100506544 Hs.627409 NR_148200 ENSG00000235513 LOC100506544 - uncharacterized LOC100506544 ncRNA chr9-3339 chr9 99455181 99455391 + 11.1 0.000 Intergenic Intergenic -80029 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr5-2414 chr5 111892904 111893114 + 11.1 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) -19499 NR_046678 100873948 Hs.147716 NR_046678 ENSG00000250095 NREP-AS1 - NREP antisense RNA 1 ncRNA chr2-4728 chr2 240514013 240514223 + 11.1 0.000 intron (NM_017844, intron 7 of 13) L1MEi|LINE|L1 43870 NM_016552 51281 Hs.656615 NM_016552 ENSG00000144504 ANKMY1 ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding chr10-4949 chr10 27425281 27425491 + 11.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL -11018 NM_001034842 374308 Hs.631832 NM_001034842 ENSG00000182077 PTCHD3 PTR patched domain containing 3 protein-coding chr5-2270 chr5 35046905 35047115 + 11.1 0.000 intron (NM_031900, intron 1 of 13) intron (NM_031900, intron 1 of 13) 939 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr2-8035 chr2 71158358 71158568 + 11.1 0.000 Intergenic HERVH-int|LTR|ERV1 27829 NM_005791 10199 Hs.656208 NM_005791 ENSG00000124383 MPHOSPH10 CT90|MPP10|MPP10P|PPP1R106 M-phase phosphoprotein 10 protein-coding chr5-5254 chr5 119943255 119943465 + 11.1 0.000 Intergenic Intergenic 313801 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr13-917 chr13 54285488 54285698 + 11.1 0.000 Intergenic L1PA8A|LINE|L1 26455 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr3-7068 chr3 176767310 176767520 + 11.1 0.000 Intergenic L1M1|LINE|L1 49586 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr16-1693 chr16 828961 829171 + 11.1 0.000 Intergenic Intergenic 23623 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr2-10140 chr2 73198168 73198378 + 11.1 0.000 Intergenic ERVL-E-int|LTR|ERVL -4301 NM_001134462 344022 Hs.694384 NM_001134462 ENSG00000214513 NOTO - notochord homeobox protein-coding chr2-4254 chr2 223230478 223230688 + 11.1 0.000 Intergenic Intergenic 178653 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr2-9470 chr2 235239949 235240159 + 11.1 0.000 Intergenic Intergenic 212319 NM_001371306 chr17-2939 chr17 57110813 57111023 + 11.1 0.000 intron (NM_003488, intron 3 of 10) intron (NM_003488, intron 3 of 10) 15429 NM_001370427 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr1-6994 chr1 167661532 167661742 + 11.1 0.000 intron (NM_001322923, intron 1 of 5) (GGATGT)n|Simple_repeat|Simple_repeat 31405 NM_001322924 92241 Hs.493867 NM_052862 ENSG00000198771 RCSD1 CAPZIP|MK2S4 RCSD domain containing 1 protein-coding chr4-4224 chr4 16150807 16151017 + 11.1 0.000 Intergenic Intergenic -66889 NM_006017 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr12-4383 chr12 5441888 5442098 + 11.1 0.000 intron (NM_001102654, intron 1 of 1) MamSINE1|SINE|tRNA-RTE 9885 NM_001102654 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr12-3173 chr12 50589813 50590023 + 11.1 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 84933 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr20-1277 chr20 47263718 47263928 + 11.1 0.000 intron (NM_001281774, intron 12 of 23) MIR|SINE|MIR -54679 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr7-3955 chr7 131497361 131497571 + 11.1 0.000 TTS (NM_013255) TTS (NM_013255) 59162 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr17-3230 chr17 16352240 16352450 + 11.1 0.000 intron (NM_181716, intron 1 of 4) CpG 1124 NM_181716 201161 Hs.433422 NM_181716 ENSG00000166582 CENPV 3110013H01Rik|CENP-V|PRR6|p30 centromere protein V protein-coding chr11-5437 chr11 70224921 70225131 + 11.1 0.000 Intergenic L1M5|LINE|L1 21863 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr3-3817 chr3 21274113 21274323 + 11.1 0.000 Intergenic Intergenic -131508 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr2-4560 chr2 65639632 65639842 + 11.1 0.000 Intergenic Intergenic -207138 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr5-5102 chr5 99196828 99197038 + 11.1 0.000 Intergenic SATR1|Satellite|Satellite -267219 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr7-1810 chr7 101897781 101897991 + 11.1 0.000 intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 80260 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr6-3560 chr6 53396684 53396894 + 11.1 0.000 Intergenic Intergenic -47610 NM_001242831 60481 Hs.520189 NM_021814 ENSG00000012660 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding chr20-2368 chr20 16898304 16898514 + 11.1 0.000 Intergenic MamTip2|DNA|hAT-Tip100 150056 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr2-3129 chr2 171287090 171287300 + 11.1 0.000 Intergenic Intergenic -55902 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr4-1360 chr4 13654244 13654454 + 11.1 0.000 promoter-TSS (NR_121681) promoter-TSS (NR_121681) -830 NR_121681 101929071 Hs.543714 NR_121681 ENSG00000250634 LINC01182 - long intergenic non-protein coding RNA 1182 ncRNA chr3-4289 chr3 156702917 156703127 + 11.1 0.000 intron (NM_015508, intron 4 of 5) intron (NM_015508, intron 4 of 5) 26358 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr10-5746 chr10 102540133 102540343 + 11.1 0.000 intron (NM_001178133, intron 2 of 10) L1MC4|LINE|L1 36266 NM_001178133 51684 Hs.404089 NM_016169 ENSG00000107882 SUFU JBTS32|PRO1280|SUFUH|SUFUXL SUFU negative regulator of hedgehog signaling protein-coding chr4-3552 chr4 181566358 181566568 + 11.1 0.000 Intergenic MamGypLTR2b|LTR|Gypsy 263510 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr10-2226 chr10 72803032 72803242 + 11.1 0.000 intron (NR_073062, intron 3 of 9) intron (NR_073062, intron 3 of 9) 82108 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr13-775 chr13 27182966 27183176 + 11.1 0.000 non-coding (NR_046548, exon 2 of 2) non-coding (NR_046548, exon 2 of 2) 10812 NR_046548 100874071 Hs.735400 NR_046548 USP12-AS2 - USP12 antisense RNA 2 (head to head) ncRNA chr17-5566 chr17 44973018 44973228 + 11.1 0.000 Intergenic Intergenic -4820 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr7-3606 chr7 31814769 31814979 + 11.1 0.000 intron (NM_001191059, intron 16 of 18) MIRb|SINE|MIR 127659 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr16-2490 chr16 88744746 88744956 + 11.1 0.000 intron (NR_120387, intron 2 of 2) intron (NR_120387, intron 2 of 2) 2084 NR_120387 339059 Hs.449817 NR_120387 ENSG00000182376 LOC339059 - uncharacterized LOC339059 ncRNA chr6-6705 chr6 594844 595054 + 11.1 0.000 intron (NM_018303, intron 10 of 27) intron (NM_018303, intron 10 of 27) 62015 NM_148959 135458 Hs.669039 NM_148959 ENSG00000188996 HUS1B - HUS1 checkpoint clamp component B protein-coding chr2-7121 chr2 185711057 185711267 + 11.1 0.000 Intergenic Intergenic 27557 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr16-3569 chr16 65545916 65546126 + 11.1 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 30279 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr4-3966 chr4 184215820 184216030 + 11.1 0.000 intron (NM_153343, intron 1 of 7) intron (NM_153343, intron 1 of 7) 1948 NM_153343 133121 Hs.297814 NM_153343 ENSG00000164303 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding chr14-2587 chr14 50720509 50720719 + 11.1 0.000 3' UTR (NM_020921, exon 31 of 31) 3' UTR (NM_020921, exon 31 of 31) -52308 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding chr11-6991 chr11 116773979 116774189 + 11.1 0.000 3' UTR (NM_001317086, exon 13 of 13) 3' UTR (NM_001317086, exon 13 of 13) -1086 NM_001159736 84811 Hs.437341 NM_032725 ENSG00000137656 BUD13 Cwc26|fSAP71 BUD13 homolog protein-coding chr20-2125 chr20 34395599 34395809 + 11.1 0.000 intron (NM_001257138, intron 3 of 23) L1MB7|LINE|L1 32431 NM_031483 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr5-4986 chr5 80550160 80550370 + 11.1 0.000 Intergenic FLAM_C|SINE|Alu 20015 NM_001004441 340120 Hs.519404 NM_001004441 ENSG00000189127 ANKRD34B DP58 ankyrin repeat domain 34B protein-coding chr2-8688 chr2 151192575 151192785 + 11.1 0.000 Intergenic MER70A|LTR|ERVL 69183 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr13-2449 chr13 49176266 49176476 + 11.1 0.000 intron (NM_001079673, intron 13 of 25) L1PA7|LINE|L1 -43967 NM_001507 2862 Hs.248126 NM_001507 ENSG00000102539 MLNR GPR38|MTLR1 motilin receptor protein-coding chr9-7450 chr9 26681499 26681709 + 11.1 0.000 Intergenic Intergenic 211198 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr7-6225 chr7 131642645 131642855 + 11.1 0.000 Intergenic Intergenic -86122 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr14-2376 chr14 36404591 36404801 + 11.1 0.000 Intergenic Intergenic -84020 NM_001144891 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr1-5775 chr1 156372150 156372360 + 11.1 0.000 intron (NR_146763, intron 2 of 11) MIR3|SINE|MIR 3044 NR_146763 57127 Hs.131835 NM_020407 ENSG00000132677 RHBG SLC42A2 Rh family B glycoprotein (gene/pseudogene) protein-coding chr20-1110 chr20 5127587 5127797 + 11.1 0.000 intron (NM_003818, intron 1 of 12) intron (NM_003818, intron 1 of 12) 684 NM_003818 8760 Hs.126857 NM_003818 ENSG00000101290 CDS2 - CDP-diacylglycerol synthase 2 protein-coding chr5-4721 chr5 42733863 42734073 + 11.1 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -22850 NM_001134848 100129792 Hs.745017 NM_001134848 ENSG00000198865 CCDC152 CH5400 coiled-coil domain containing 152 protein-coding chr3-3172 chr3 179108191 179108401 + 11.1 0.000 intron (NR_125401, intron 2 of 2) MLT1F1|LTR|ERVL-MaLR -36487 NM_022470 64393 Hs.371609 NM_022470 ENSG00000172667 ZMAT3 PAG608|WIG-1|WIG1 zinc finger matrin-type 3 protein-coding chr8-2992 chr8 101249177 101249387 + 11.1 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -43218 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr21-1219 chr21 45244979 45245189 + 11.1 0.000 intron (NR_135279, intron 2 of 2) LTR16D2|LTR|ERVL 10744 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr1-8582 chr1 178451681 178451891 + 11.1 0.000 intron (NM_004841, intron 8 of 15) intron (NM_004841, intron 8 of 15) -61323 NM_032126 84066 Hs.534501 NM_032126 ENSG00000240021 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding chr2-8419 chr2 118670824 118671034 + 11.1 0.000 Intergenic Intergenic -67963 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr5-4780 chr5 55724943 55725153 + 11.1 0.000 Intergenic MER21A|LTR|ERVL -12713 NM_001349382 153129 Hs.742101 NM_173514 ENSG00000177058 SLC38A9 URLC11 solute carrier family 38 member 9 protein-coding chr22-969 chr22 24245712 24245922 + 11.1 0.000 promoter-TSS (NM_001302465) promoter-TSS (NM_001302465) -675 NM_004121 2687 Hs.437156 NM_004121 ENSG00000099998 GGT5 GGL|GGT 5|GGT-REL|GGTLA1 gamma-glutamyltransferase 5 protein-coding chr9-6590 chr9 125821390 125821600 + 11.1 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 73312 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr4-3932 chr4 163401874 163402084 + 11.1 0.000 Intergenic MER31A|LTR|ERV1 57877 NM_001317091 4889 Hs.519058 NM_006174 ENSG00000164129 NPY5R NPY5-R|NPYR5|NPYY5-R neuropeptide Y receptor Y5 protein-coding chr15-1920 chr15 83206462 83206672 + 11.1 0.000 intron (NM_016073, intron 1 of 5) intron (NM_016073, intron 1 of 5) 1256 NM_016073 50810 Hs.513954 NM_016073 ENSG00000166503 HDGFL3 CGI-142|HDGF-2|HDGF2|HDGFRP3|HRP-3 HDGF like 3 protein-coding chr22-2843 chr22 44390073 44390283 + 11.1 0.000 Intergenic Intergenic -53149 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 - long intergenic non-protein coding RNA 1656 ncRNA chr10-2143 chr10 63767211 63767421 + 11.1 0.000 Intergenic Intergenic -245426 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr14-2623 chr14 61797986 61798196 + 11.1 0.000 Intergenic Intergenic -14071 NM_001367650 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr21-492 chr21 15614856 15615066 + 11.1 0.000 Intergenic Intergenic -114973 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr3-8554 chr3 149382218 149382428 + 11.1 0.000 intron (NR_109810, intron 1 of 1) intron (NR_109810, intron 1 of 1) 4545 NR_109810 100874091 Hs.549633 NR_046650 ENSG00000240541 TM4SF1-AS1 - TM4SF1 antisense RNA 1 ncRNA chr5-4068 chr5 57018480 57018690 + 11.1 0.000 Intergenic HERVH-int|LTR|ERV1 -66455 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr12-4467 chr12 15530999 15531209 + 11.1 0.000 intron (NM_030667, intron 12 of 26) L1M3f|LINE|L1 -15507 NM_030669 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr21-1024 chr21 21176162 21176372 + 11.1 0.000 intron (NM_001352597, intron 1 of 10) intron (NM_001352597, intron 1 of 10) 29105 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr4-3780 chr4 98611378 98611588 + 11.1 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 47128 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr9-7765 chr9 77194596 77194806 + 11.1 0.000 intron (NM_001018038, intron 1 of 68) L1PA15|LINE|L1 -16784 NR_026668 100286938 Hs.662256 NR_026668 ENSG00000232998 VPS13A-AS1 - VPS13A antisense RNA 1 ncRNA chr18-2137 chr18 55415369 55415579 + 11.1 0.000 intron (NM_001348217, intron 4 of 18) intron (NM_001348217, intron 4 of 18) 6823 NM_001348212 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr19-3514 chr19 41807185 41807395 + 11.1 0.000 non-coding (NR_102333, exon 3 of 8) non-coding (NR_102333, exon 3 of 8) 10703 NR_102333 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr12-5247 chr12 109036376 109036586 + 11.1 0.000 intron (NM_001301175, intron 3 of 15) AluSx|SINE|Alu 13392 NM_001301175 84749 Hs.486434 NM_032663 ENSG00000135093 USP30 - ubiquitin specific peptidase 30 protein-coding chr7-5674 chr7 65438692 65438902 + 11.1 0.000 Intergenic Intergenic 64942 NM_001287533 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr3-2446 chr3 48427103 48427313 + 11.1 0.000 intron (NM_001130082, intron 1 of 37) intron (NM_001130082, intron 1 of 37) 2255 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chr4-1039 chr4 40750431 40750641 + 11.1 0.000 intron (NM_024677, intron 1 of 11) intron (NM_024677, intron 1 of 11) 581 NM_024677 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr1-9612 chr1 45624041 45624251 + 11.1 0.000 promoter-TSS (NM_001190182) promoter-TSS (NM_001190182) -92 NM_001114938 149483 Hs.18912 NM_152500 ENSG00000159588 CCDC17 - coiled-coil domain containing 17 protein-coding chr2-2710 chr2 54899948 54900158 + 11.1 0.000 intron (NM_001039753, intron 21 of 40) intron (NM_001039753, intron 21 of 40) 110219 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr1-8147 chr1 13544991 13545201 + 11.1 0.000 Intergenic AluSq2|SINE|Alu -31093 NM_001010847 126755 Hs.657356 NM_001010847 ENSG00000162494 LRRC38 - leucine rich repeat containing 38 protein-coding chr19-5694 chr19 11336500 11336710 + 11.1 0.000 intron (NM_004283, intron 2 of 4) intron (NM_004283, intron 2 of 4) 3052 NM_004283 9545 Hs.744916 NM_004283 ENSG00000105514 RAB3D D2-2|GOV|RAB16|RAD3D RAB3D, member RAS oncogene family protein-coding chr11-3009 chr11 134139706 134139916 + 11.1 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 11552 NR_145790 109623486 NR_145790 SNORD153 - small nucleolar RNA, C/D box 153 snoRNA chr15-916 chr15 64623746 64623956 + 11.1 0.000 intron (NM_015042, intron 2 of 8) intron (NM_015042, intron 2 of 8) 79430 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr3-1951 chr3 24196618 24196828 + 11.1 0.000 intron (NM_001354714, intron 2 of 8) MamTip2|DNA|hAT-Tip100 45399 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr4-740 chr4 86594591 86594801 + 11.1 0.000 5' UTR (NM_006264, exon 1 of 47) 5' UTR (NM_006264, exon 1 of 47) 381 NM_006264 5783 Hs.436142 NM_006264 ENSG00000163629 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase non-receptor type 13 protein-coding chr19-2999 chr19 43201569 43201779 + 11.1 0.000 intron (NM_001316339, intron 1 of 4) LTR8B|LTR|ERV1 3964 NM_213633 5672 Hs.711363 NM_002780 ENSG00000243137 PSG4 PSBG-4|PSBG-9|PSG9 pregnancy specific beta-1-glycoprotein 4 protein-coding chr10-3514 chr10 71268489 71268699 + 11.1 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -50366 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chrX-2750 chrX 129303086 129303296 + 11.1 0.000 Intergenic L2b|LINE|L2 220299 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr2-4909 chr2 148782144 148782354 + 11.1 0.000 intron (NM_015630, intron 11 of 13) intron (NM_015630, intron 11 of 13) -92978 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr1-10173 chr1 110213505 110213715 + 11.1 0.000 intron (NM_004978, intron 1 of 3) intron (NM_004978, intron 1 of 3) 3296 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr9-3879 chr9 133829355 133829565 + 11.1 0.000 intron (NM_001134398, intron 4 of 29) MER33|DNA|hAT-Charlie -89505 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr8-2973 chr8 80705361 80705571 + 11.1 0.000 intron (NM_001033723, intron 2 of 8) (GT)n|Simple_repeat|Simple_repeat 169002 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr7-3160 chr7 83778830 83779040 + 11.1 0.000 Intergenic Intergenic -129796 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr17-3415 chr17 8282814 8283024 + 11.1 0.000 Intergenic L2c|LINE|L2 -5751 NM_001330127 29098 Hs.408233 NM_016492 ENSG00000108961 RANGRF HSPC165|HSPC236|MOG1|RANGNRF RAN guanine nucleotide release factor protein-coding chr20-2823 chr20 59291051 59291261 + 11.1 0.000 Intergenic MER113|DNA|hAT-Charlie -9455 NM_207033 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding chr8-1825 chr8 127253821 127254031 + 11.1 0.000 intron (NR_117099, intron 1 of 3) intron (NR_117099, intron 1 of 3) 9289 NR_117099 103021164 Hs.571531 NR_117099 CASC21 CARLO2|CARLo-2|LINC01244 cancer susceptibility 21 ncRNA chr17-2620 chr17 1932260 1932470 + 11.1 0.000 Intergenic Intergenic -85351 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr13-1065 chr13 33032215 33032425 + 11.1 0.000 intron (NM_004795, intron 1 of 4) MLT1G3|LTR|ERVL-MaLR 15897 NM_004795 9365 Hs.524953 NM_004795 ENSG00000133116 KL HFTC3 klotho protein-coding chr1-10496 chr1 164930913 164931123 + 11.1 0.000 Intergenic Intergenic -156377 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr11-780 chr11 118659595 118659805 + 11.1 0.000 intron (NM_007180, intron 11 of 14) intron (NM_007180, intron 11 of 14) 15700 NR_106773 102466719 NR_106773 ENSG00000284246 MIR6716 hsa-mir-6716 microRNA 6716 ncRNA chrX-2314 chrX 55076215 55076425 + 11.1 0.000 intron (NM_001015038, intron 2 of 4) (TC)n|Simple_repeat|Simple_repeat 1290 NM_001015038 389860 Hs.293317 NM_001015038 ENSG00000238269 PAGE2B CT16.5|GAGEE3|PAGE-2B PAGE family member 2B protein-coding chr1-4868 chr1 31746555 31746765 + 11.1 0.000 intron (NM_001294335, intron 4 of 32) intron (NM_001294335, intron 4 of 32) 12075 NR_036216 100423028 NR_036216 ENSG00000266580 MIR4254 - microRNA 4254 ncRNA chr16-1185 chr16 781765 781975 + 11.1 0.000 Intergenic Intergenic 6511 NM_001324413 113000 Hs.101742 NM_058192 ENSG00000007376 RPUSD1 C16orf40|RLUCL RNA pseudouridine synthase domain containing 1 protein-coding chr11-4175 chr11 57597989 57598199 + 11.1 0.000 promoter-TSS (NM_001032295) promoter-TSS (NM_001032295) -117 NM_001032295 710 Hs.384598 NM_000062 ENSG00000149131 SERPING1 C1IN|C1INH|C1NH|HAE1|HAE2 serpin family G member 1 protein-coding chr1-10986 chr1 216606248 216606458 + 11.1 0.000 intron (NM_001243505, intron 3 of 6) intron (NM_001243505, intron 3 of 6) 117076 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr2-2749 chr2 178277913 178278123 + 11.1 0.000 intron (NM_001201480, intron 1 of 25) L2c|LINE|L2 -42224 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr18-2099 chr18 50083007 50083217 + 11.1 0.000 intron (NM_001080467, intron 1 of 39) MER21B|LTR|ERVL 43451 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr14-3859 chr14 80476385 80476595 + 11.1 0.000 Intergenic Intergenic -245433 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr20-526 chr20 33443894 33444104 + 11.1 0.000 promoter-TSS (NM_003098) promoter-TSS (NM_003098) -107 NM_003098 6640 Hs.31121 NM_003098 ENSG00000101400 SNTA1 LQT12|SNT1|TACIP1|dJ1187J4.5 syntrophin alpha 1 protein-coding chr13-991 chr13 59750949 59751159 + 11.1 0.000 intron (NM_001258366, intron 26 of 26) intron (NM_001258366, intron 26 of 26) -261664 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr13-909 chr13 50626035 50626245 + 11.1 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -98691 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr1-12267 chr1 226335726 226335936 + 11.1 0.000 Intergenic Intergenic -26064 NM_001270410 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr16-2994 chr16 26799716 26799926 + 11.1 0.000 Intergenic Intergenic -267106 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr9-3946 chr9 136233136 136233346 + 11.1 0.000 intron (NM_181701, intron 1 of 11) Tigger2|DNA|TcMar-Tigger 12600 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr8-1749 chr8 27413799 27414009 + 11.1 0.000 intron (NM_173175, intron 2 of 29) L1MC4|LINE|L1 -19466 NR_106901 102465507 NR_106901 ENSG00000273836 MIR6842 hsa-mir-6842 microRNA 6842 ncRNA chr5-5255 chr5 119966274 119966484 + 11.1 0.000 Intergenic Intergenic 336820 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr8-2164 chr8 84241830 84242040 + 11.1 0.000 intron (NM_001354320, intron 2 of 9) L1PA11|LINE|L1 57269 NM_001354323 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr3-4224 chr3 134761281 134761491 + 11.1 0.000 Intergenic Intergenic -33874 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr10-3589 chr10 87735390 87735600 + 11.1 0.000 intron (NM_001015880, intron 9 of 12) intron (NM_001015880, intron 9 of 12) 75617 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chrX-2626 chrX 109477305 109477515 + 11.1 0.000 intron (NM_001522, intron 1 of 19) L2c|LINE|L2 4676 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr18-2735 chr18 74689159 74689369 + 11.1 0.000 intron (NM_001146190, intron 2 of 3) L1MCc|LINE|L1 58301 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr2-2552 chr2 216546957 216547167 + 11.1 0.000 Intergenic Intergenic 48218 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chrX-651 chrX 71095655 71095865 + 11.1 0.000 promoter-TSS (NM_005938) promoter-TSS (NM_005938) -91 NM_001170931 4303 Hs.584654 NM_005938 ENSG00000184481 FOXO4 AFX|AFX1|MLLT7 forkhead box O4 protein-coding chr3-6996 chr3 169946564 169946774 + 11.1 0.000 non-coding (NR_027622, exon 2 of 2) non-coding (NR_027622, exon 2 of 2) 20065 NR_024409 100128164 Hs.633070 NR_024409 ENSG00000239219 LOC100128164 - four and a half LIM domains 1 pseudogene pseudo chr11-6810 chr11 92776656 92776866 + 11.1 0.000 intron (NM_001008781, intron 6 of 24) intron (NM_001008781, intron 6 of 24) 138867 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr6-4442 chr6 34112828 34113038 + 11.1 0.000 intron (NM_001256809, intron 1 of 8) X7C_LINE|LINE|CR1 -2170 NM_001256812 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr3-4662 chr3 40006313 40006523 + 11.1 0.000 intron (NM_001284424, intron 2 of 15) L2|LINE|L2 -93593 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr4-4627 chr4 79789606 79789816 + 11.1 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -37760 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr9-4336 chr9 128141958 128142168 + 11.1 0.000 Intergenic Intergenic -7390 NM_005564 3934 Hs.204238 NM_005564 ENSG00000148346 LCN2 24p3|MSFI|NGAL|p25 lipocalin 2 protein-coding chr8-3887 chr8 38318633 38318843 + 11.1 0.000 intron (NM_017778, intron 9 of 9) intron (NM_017778, intron 9 of 9) -49506 NM_001354454 84513 Hs.567619 NM_032483 ENSG00000147535 PLPP5 DPPL1|HTPAP|PPAPDC1B phospholipid phosphatase 5 protein-coding chr2-8154 chr2 84406773 84406983 + 11.1 0.000 Intergenic Intergenic 52402 NM_003849 8802 Hs.270428 NM_003849 ENSG00000163541 SUCLG1 GALPHA|MTDPS9|SUCLA1 succinate-CoA ligase alpha subunit protein-coding chr7-4989 chr7 155242725 155242935 + 11.1 0.000 Intergenic HERVK9-int|LTR|ERVK -54942 NM_001346590 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr12-3888 chr12 118151270 118151480 + 11.1 0.000 intron (NM_001346490, intron 21 of 21) intron (NM_001346490, intron 21 of 21) 15251 NM_002567 5037 Hs.433863 NM_002567 ENSG00000089220 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|HEL-S-96|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding chr15-2982 chr15 51935883 51936093 + 11.1 0.000 Intergenic LTR50|LTR|ERVL -11868 NR_109775 100422556 Hs.664788 NR_109775 LOC100422556 - LEO1 homolog, Paf1/RNA polymerase II complex component pseudogene pseudo chr8-2567 chr8 39991063 39991273 + 11.1 0.000 intron (NM_194294, intron 8 of 10) intron (NM_194294, intron 8 of 10) 56213 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr9-2574 chr9 135716081 135716291 + 11.1 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 14001 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr19-2349 chr19 48271075 48271285 + 11.1 0.000 promoter-TSS (NM_001331098) promoter-TSS (NM_001331098) -65 NM_001331098 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr6-3771 chr6 16623123 16623333 + 11.1 0.000 intron (NM_000332, intron 4 of 8) L1ME3E|LINE|L1 136956 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr5-2908 chr5 129402462 129402672 + 11.1 0.000 Intergenic L1ME3A|LINE|L1 -5420 NR_039665 100616325 NR_039665 ENSG00000265691 MIR4460 - microRNA 4460 ncRNA chr12-4631 chr12 43337083 43337293 + 11.1 0.000 Intergenic Intergenic 181873 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr5-5208 chr5 114269978 114270188 + 11.1 0.000 Intergenic Intergenic -91987 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr1-3361 chr1 93907544 93907754 + 11.1 0.000 intron (NM_002061, intron 1 of 6) intron (NM_002061, intron 1 of 6) 1781 NM_002061 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr9-2129 chr9 107445310 107445520 + 11.1 0.000 intron (NR_121581, intron 4 of 7) intron (NR_121581, intron 4 of 7) 21170 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr14-910 chr14 69600400 69600610 + 11.1 0.000 Intergenic Intergenic -11091 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr12-4525 chr12 24997551 24997761 + 11.1 0.000 promoter-TSS (NM_001101339) promoter-TSS (NM_001101339) 81 NM_001321724 645177 Hs.569157 NM_001321724 LOC645177 - uncharacterized LOC645177 protein-coding chr14-1514 chr14 53214366 53214576 + 11.1 0.000 Intergenic LTR18B|LTR|ERVL 61117 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr3-11207 chr3 194171404 194171614 + 11.1 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 34798 NR_125404 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chr8-5347 chr8 16012110 16012320 + 11.1 0.000 Intergenic Intergenic 174057 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr4-1714 chr4 180943516 180943726 + 11.1 0.000 Intergenic AluSc5|SINE|Alu 215528 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr17-3750 chr17 29549483 29549693 + 11.1 0.000 3' UTR (NM_020791, exon 20 of 20) 3' UTR (NM_020791, exon 20 of 20) 17449 NM_198147 116236 Hs.106510 NM_198147 ENSG00000168792 ABHD15 - abhydrolase domain containing 15 protein-coding chr3-6866 chr3 151432026 151432236 + 11.1 0.000 intron (NM_053002, intron 42 of 42) intron (NM_053002, intron 42 of 42) 8649 NM_001178145 285313 Hs.58561 NM_178822 ENSG00000152580 IGSF10 CMF608 immunoglobulin superfamily member 10 protein-coding chr11-7210 chr11 134192685 134192895 + 11.1 0.000 exon (NM_015261, exon 16 of 35) exon (NM_015261, exon 16 of 35) 31742 NM_015261 23310 Hs.438550 NM_015261 ENSG00000151503 NCAPD3 CAP-D3|CAPD3|MCPH22|hCAP-D3|hHCP-6|hcp-6 non-SMC condensin II complex subunit D3 protein-coding chr9-1845 chr9 137297426 137297636 + 11.1 0.000 Intergenic Intergenic 4740 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr3-1596 chr3 178485816 178486026 + 11.1 0.000 Intergenic Intergenic -50515 NM_181361 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr5-3285 chr5 115978048 115978258 + 11.1 0.000 intron (NM_173800, intron 1 of 19) intron (NM_173800, intron 1 of 19) 15678 NM_173800 206338 Hs.98288 NM_173800 ENSG00000172901 LVRN APQ|AQPEP|TAQPEP laeverin protein-coding chr10-1487 chr10 132765012 132765222 + 11.1 0.000 intron (NM_005539, intron 11 of 15) intron (NM_005539, intron 11 of 15) 21030 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr1-2988 chr1 185317055 185317265 + 11.1 0.000 promoter-TSS (NM_006469) promoter-TSS (NM_006469) 83 NM_006469 10625 Hs.497183 NM_006469 ENSG00000116679 IVNS1ABP ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP influenza virus NS1A binding protein protein-coding chr7-1896 chr7 151426801 151427011 + 11.1 0.000 Intergenic Intergenic 6733 NR_037468 100500835 NR_037468 ENSG00000265810 MIR3907 - microRNA 3907 ncRNA chr6-2503 chr6 133924136 133924346 + 11.1 0.000 Intergenic Intergenic -27929 NM_001253676 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr4-5255 chr4 171600948 171601158 + 11.1 0.000 Intergenic Intergenic 37710 NR_147157 105377536 Hs.550719 NR_147157 ENSG00000249297 LINC02174 - long intergenic non-protein coding RNA 2174 ncRNA chr6-3529 chr6 37456445 37456655 + 11.1 0.000 intron (NM_015050, intron 8 of 23) intron (NM_015050, intron 8 of 23) 23329 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr9-2448 chr9 12439199 12439409 + 11.1 0.000 Intergenic L1MA4A|LINE|L1 -254081 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr16-2202 chr16 84398590 84398800 + 11.1 0.000 intron (NM_014861, intron 2 of 26) intron (NM_014861, intron 2 of 26) -7893 NM_001291454 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr22-2543 chr22 25947612 25947822 + 11.1 0.000 exon (NM_032608, exon 36 of 44) exon (NM_032608, exon 36 of 44) 205529 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr12-3262 chr12 65854812 65855022 + 11.1 0.000 intron (NR_158985, intron 2 of 2) intron (NR_158985, intron 2 of 2) 26661 NR_120478 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr10-2657 chr10 93752892 93753102 + 11.1 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -4812 NR_131777 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr1-5850 chr1 246508917 246509127 + 11.1 0.000 Intergenic ERVL-E-int|LTR|ERVL -1743 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr8-2299 chr8 127875931 127876141 + 11.1 0.000 intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 72687 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr12-3030 chr12 388704 388914 + 11.1 0.000 promoter-TSS (NM_001130147) promoter-TSS (NM_001130147) 511 NM_001042603 5927 Hs.76272 NM_005056 ENSG00000073614 KDM5A RBBP-2|RBBP2|RBP2 lysine demethylase 5A protein-coding chr4-2968 chr4 112058685 112058895 + 11.1 0.000 Intergenic Intergenic -86664 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr13-2660 chr13 82435880 82436090 + 11.1 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -1209002 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr21-754 chr21 42735525 42735735 + 11.1 0.000 intron (NM_001001580, intron 2 of 13) MLT1C|LTR|ERVL-MaLR 44364 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr4-2262 chr4 169790174 169790384 + 11.1 0.000 Intergenic SATR1|Satellite|Satellite -32335 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr6-3188 chr6 129341088 129341298 + 11.1 0.000 intron (NM_000426, intron 29 of 64) intron (NM_000426, intron 29 of 64) 368984 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr15-1195 chr15 41836653 41836863 + 11.1 0.000 intron (NM_005090, intron 6 of 24) intron (NM_005090, intron 6 of 24) -2055 NM_001114633 100137049 Hs.198161 NM_001114633 ENSG00000243708 PLA2G4B HsT16992|cPLA2-beta phospholipase A2 group IVB protein-coding chr16-4814 chr16 86355680 86355890 + 11.1 0.000 Intergenic L1ME4a|LINE|L1 -10106 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr10-5993 chr10 124808546 124808756 + 11.1 0.000 intron (NM_032182, intron 2 of 8) intron (NM_032182, intron 2 of 8) 6832 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr8-1843 chr8 143446801 143447011 + 11.1 0.000 intron (NM_015117, intron 9 of 11) intron (NM_015117, intron 9 of 11) -16174 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr13-4224 chr13 94522782 94522992 + 11.1 0.000 intron (NM_001322186, intron 1 of 9) MIRb|SINE|MIR 26519 NM_001322182 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr4-3981 chr4 828416 828626 + 11.1 0.000 Intergenic Intergenic -2392 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr14-2672 chr14 73771936 73772146 + 11.1 0.000 intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) -11738 NM_001367710 91748 Hs.594157 NM_194278 ENSG00000156030 ELMSAN1 C14orf117|C14orf43|LSR68|MIDEAS|c14_5541 ELM2 and Myb/SANT domain containing 1 protein-coding chr2-9139 chr2 209780288 209780498 + 11.1 0.000 intron (NM_032504, intron 4 of 63) intron (NM_032504, intron 4 of 63) 8400 NM_032504 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr9-3922 chr9 134948319 134948529 + 11.1 0.000 Intergenic Intergenic -30512 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr18-408 chr18 32158170 32158380 + 11.1 0.000 Intergenic Intergenic -31764 NM_001308171 4225 Hs.194777 NM_005925 ENSG00000141434 MEP1B - meprin A subunit beta protein-coding chr22-1848 chr22 38040951 38041161 + 11.1 0.000 intron (NM_001301130, intron 5 of 5) MIRc|SINE|MIR -16199 NM_001039583 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr7-6103 chr7 119514278 119514488 + 11.1 0.000 Intergenic Intergenic 392992 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr16-3305 chr16 89778916 89779126 + 11.1 0.000 intron (NM_000135, intron 18 of 42) intron (NM_000135, intron 18 of 42) 37626 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr22-1801 chr22 32501932 32502142 + 11.1 0.000 Intergenic Intergenic 26800 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr5-4647 chr5 35693204 35693414 + 11.1 0.000 intron (NM_024867, intron 12 of 36) intron (NM_024867, intron 12 of 36) 75446 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr1-3512 chr1 162092046 162092256 + 11.1 0.000 intron (NM_014697, intron 1 of 9) intron (NM_014697, intron 1 of 9) 22460 NM_001164757 9722 Hs.731942 NM_014697 ENSG00000198929 NOS1AP 6330408P19Rik|CAPON nitric oxide synthase 1 adaptor protein protein-coding chr7-2444 chr7 129831593 129831803 + 11.1 0.000 3' UTR (NM_003344, exon 7 of 7) 3' UTR (NM_003344, exon 7 of 7) -56684 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr1-4902 chr1 37975275 37975485 + 11.1 0.000 intron (NM_006802, intron 12 of 16) AluSz6|SINE|Alu 14642 NM_001320830 10946 Hs.77897 NM_006802 ENSG00000183431 SF3A3 PRP9|PRPF9|SAP61|SF3a60 splicing factor 3a subunit 3 protein-coding chr7-6066 chr7 114072905 114073115 + 11.1 0.000 Intergenic Intergenic -13317 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr11-8448 chr11 113664782 113664992 + 11.1 0.000 Intergenic LTR47A2|LTR|ERVL 41421 NM_001288752 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding chr17-3453 chr17 38874508 38874718 + 11.1 0.000 intron (NR_073384, intron 1 of 7) intron (NR_073384, intron 1 of 7) 4555 NM_006148 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr1-4978 chr1 57353589 57353799 + 11.1 0.000 intron (NM_001353980, intron 4 of 5) MIRb|SINE|MIR 69418 NM_001365793 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr15-1206 chr15 45112781 45112991 + 11.1 0.000 intron (NM_014080, intron 3 of 33) CpG 1275 NM_014080 50506 Hs.71377 NM_014080 ENSG00000140279 DUOX2 LNOX2|NOXEF2|P138-TOX|TDH6|THOX2 dual oxidase 2 protein-coding chr5-5457 chr5 138553739 138553949 + 11.1 0.000 TTS (NM_004134) TTS (NM_004134) 5197 NR_145752 109617013 NR_145752 ENSG00000222937 SNORD63B - small nucleolar RNA, C/D box 63B snoRNA chr7-4629 chr7 28608420 28608630 + 11.1 0.000 intron (NM_182899, intron 4 of 9) intron (NM_182899, intron 4 of 9) -77608 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr16-2505 chr16 89646224 89646434 + 11.1 0.000 intron (NR_046418, intron 6 of 6) intron (NR_046418, intron 6 of 6) 11379 NR_046418 5119 Hs.589427 NM_002768 ENSG00000131165 CHMP1A CHMP1|PCH8|PCOLN3|PRSM1|VPS46-1|VPS46A charged multivesicular body protein 1A protein-coding chr11-5440 chr11 71447791 71448001 + 11.1 0.000 intron (NM_001163817, intron 1 of 8) intron (NM_001163817, intron 1 of 8) 497 NM_001163817 1717 Hs.503134 NM_001360 ENSG00000172893 DHCR7 SLOS 7-dehydrocholesterol reductase protein-coding chr11-6470 chr11 67489486 67489696 + 11.1 0.000 promoter-TSS (NR_106810) promoter-TSS (NR_106810) -654 NR_106810 102465450 NR_106810 ENSG00000276769 MIR6752 hsa-mir-6752 microRNA 6752 ncRNA chr5-5540 chr5 146722755 146722965 + 11.1 0.000 intron (NM_001271899, intron 2 of 9) intron (NM_001271899, intron 2 of 9) 155925 NM_001271948 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr6-2257 chr6 56592870 56593080 + 11.1 0.000 intron (NM_001144770, intron 40 of 94) intron (NM_001144770, intron 40 of 94) 49914 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr2-4988 chr2 211327577 211327787 + 11.1 0.000 Intergenic Intergenic 710111 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr10-5261 chr10 67873317 67873527 + 11.1 0.000 Intergenic AluSx1|SINE|Alu -11234 NM_012238 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr2-9852 chr2 174436880 174437090 + 11.1 0.000 intron (NM_001267051, intron 14 of 14) intron (NM_001267051, intron 14 of 14) 41255 NM_024583 79634 Hs.470679 NM_024583 ENSG00000144306 SCRN3 SES3 secernin 3 protein-coding chr10-1895 chr10 113680594 113680804 + 11.1 0.000 intron (NM_001227, intron 1 of 6) intron (NM_001227, intron 1 of 6) 787 NM_033339 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding chr22-1785 chr22 29654292 29654502 + 11.1 0.000 intron (NM_181833, intron 4 of 4) intron (NM_181833, intron 4 of 4) 50764 NM_181831 4771 Hs.187898 NM_000268 ENSG00000186575 NF2 ACN|BANF|SCH neurofibromin 2 protein-coding ML143380.1-2 ML143380.1 225080 225290 + 11.1 0.000 NA NA NA NA chr5-4012 chr5 31771388 31771598 + 11.1 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 132362 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr22-1429 chr22 44608808 44609018 + 11.1 0.000 intron (NR_044991, intron 3 of 4) intron (NR_044991, intron 3 of 4) 16506 NR_044991 414351 Hs.572878 NR_044991 LINC00229 C22orf10|NCRNA00229|dJ474I12.C22.2 long intergenic non-protein coding RNA 229 ncRNA chr19-4601 chr19 12839780 12839990 + 11.1 0.000 intron (NM_014975, intron 1 of 25) AluJr|SINE|Alu 1370 NM_014975 22983 Hs.227489 NM_014975 ENSG00000105613 MAST1 MCCCHCM|SAST microtubule associated serine/threonine kinase 1 protein-coding chr7-7670 chr7 151414709 151414919 + 11.1 0.000 Intergenic L1MB7|LINE|L1 -4102 NM_001284261 349136 Hs.647083 NM_198285 ENSG00000187260 WDR86 - WD repeat domain 86 protein-coding chr1-5133 chr1 154896225 154896435 + 11.1 0.000 Intergenic Intergenic -26049 NM_002249 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr20-1095 chr20 63092051 63092261 + 11.1 0.000 Intergenic Intergenic -9136 NR_003244 768096 Hs.549606 NR_003244 HAR1A HAR1F|LINC00064|NCRNA00064 highly accelerated region 1A ncRNA chr1-8360 chr1 61273241 61273451 + 11.1 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) -19828 NR_104180 645030 Hs.632410 NR_104180 ENSG00000237853 NFIA-AS1 - NFIA antisense RNA 1 ncRNA chr7-5221 chr7 14064653 14064863 + 11.1 0.000 Intergenic Intergenic -73333 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr4-2803 chr4 32955597 32955807 + 11.1 0.000 Intergenic LTR73|LTR|ERV1 604664 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr12-1002 chr12 124994054 124994264 + 11.1 0.000 intron (NM_080626, intron 1 of 2) CpG 514 NM_080626 140707 Hs.596464 NM_080626 ENSG00000184992 BRI3BP BNAS1|HCCR-1|HCCR-2|HCCRBP-1|HCCRBP-3|KG19 BRI3 binding protein protein-coding chr22-1605 chr22 20298497 20298707 + 11.1 0.000 Intergenic Intergenic 21458 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr10-2449 chr10 13716244 13716454 + 11.1 0.000 intron (NM_001318336, intron 11 of 23) intron (NM_001318336, intron 11 of 23) -8782 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr16-2321 chr16 28876748 28876958 + 11.1 0.000 Intergenic Intergenic -1635 NM_173201 487 Hs.657344 NM_004320 ENSG00000196296 ATP2A1 ATP2A|SERCA1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 protein-coding chr12-3602 chr12 52978588 52978798 + 11.1 0.000 Intergenic AluSq|SINE|Alu -27763 NM_001330654 1975 Hs.648394 NM_001417 ENSG00000063046 EIF4B EIF-4B|PRO1843 eukaryotic translation initiation factor 4B protein-coding chr7-1369 chr7 107044708 107044918 + 11.1 0.000 5' UTR (NM_002736, exon 1 of 11) 5' UTR (NM_002736, exon 1 of 11) 108 NM_002736 5577 Hs.433068 NM_002736 ENSG00000005249 PRKAR2B PRKAR2|RII-BETA protein kinase cAMP-dependent type II regulatory subunit beta protein-coding chr2-7271 chr2 234347260 234347470 + 11.1 0.000 Intergenic MER45A|DNA|hAT-Tip100 107230 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr10-2325 chr10 60384835 60385045 + 11.1 0.000 intron (NM_001204403, intron 2 of 43) L2a|LINE|L2 4935 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr2-3975 chr2 73037028 73037238 + 11.1 0.000 intron (NR_138476, intron 3 of 14) intron (NR_138476, intron 3 of 14) 22039 NM_001330411 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr7-2598 chr7 139396263 139396473 + 11.1 0.000 intron (NM_016019, intron 2 of 9) AluJb|SINE|Alu 31158 NR_033999 100129148 Hs.744449 NR_033999 LOC100129148 - uncharacterized LOC100129148 ncRNA chr5-4401 chr5 180581702 180581912 + 11.1 0.000 Intergenic MER3|DNA|hAT-Charlie 9692 NM_052863 92304 Hs.62492 NM_052863 ENSG00000161055 SCGB3A1 HIN-1|HIN1|LU105|PnSP-2|UGRP2 secretoglobin family 3A member 1 protein-coding chr20-2209 chr20 58494395 58494605 + 11.1 0.000 intron (NR_130908, intron 1 of 1) AluJo|SINE|Alu 20438 NR_130908 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding chr5-5048 chr5 90897796 90898006 + 11.1 0.000 intron (NR_003149, intron 83 of 89) intron (NR_003149, intron 83 of 89) 339104 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr1-12129 chr1 168719613 168719823 + 11.1 0.000 intron (NM_001937, intron 1 of 3) intron (NM_001937, intron 1 of 3) 9488 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr8-939 chr8 48654095 48654305 + 11.1 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 33797 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA chr2-7371 chr2 3145819 3146029 + 11.1 0.000 Intergenic Intergenic -19898 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr2-2338 chr2 177245002 177245212 + 11.1 0.000 intron (NM_001313903, intron 1 of 4) intron (NM_001313903, intron 1 of 4) 10903 NR_036075 100422824 NR_036075 ENSG00000265396 MIR3128 mir-3128 microRNA 3128 ncRNA chr1-4516 chr1 33334764 33334974 + 11.1 0.000 intron (NM_198040, intron 8 of 13) intron (NM_198040, intron 8 of 13) -2377 NR_037400 100500853 NR_037400 ENSG00000284154 MIR3605 mir-3605 microRNA 3605 ncRNA chr19-4007 chr19 2807697 2807907 + 11.1 0.000 exon (NM_003249, exon 8 of 13) exon (NM_003249, exon 8 of 13) -12066 NM_001102651 115196 Hs.307043 NM_152303 ENSG00000172006 ZNF554 - zinc finger protein 554 protein-coding chr11-4169 chr11 57255710 57255920 + 11.1 0.000 Intergenic L1MB8|LINE|L1 -18362 NM_005161 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr3-6722 chr3 135770434 135770644 + 11.1 0.000 Intergenic Intergenic -195189 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr4-2441 chr4 153977055 153977265 + 11.1 0.000 Intergenic HAL1|LINE|L1 -188077 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr1-10857 chr1 204981634 204981844 + 11.1 0.000 intron (NM_001160332, intron 19 of 27) intron (NM_001160332, intron 19 of 27) 37513 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr7-2914 chr7 133438532 133438742 + 11.1 0.000 intron (NM_021807, intron 7 of 17) intron (NM_021807, intron 7 of 17) 147756 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chr3-5407 chr3 160434215 160434425 + 11.1 0.000 3' UTR (NM_005496, exon 23 of 23) 3' UTR (NM_005496, exon 23 of 23) 15466 NM_173084 286827 Hs.212957 NM_173084 ENSG00000213186 TRIM59 IFT80L|MRF1|RNF104|TRIM57|TSBF1 tripartite motif containing 59 protein-coding chr11-3212 chr11 67076418 67076628 + 11.1 0.000 Intergenic Intergenic 19676 NM_001300886 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr3-5412 chr3 161969959 161970169 + 11.1 0.000 Intergenic Intergenic 473256 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr7-4157 chr7 100384853 100385063 + 11.1 0.000 intron (NM_178273, intron 2 of 4) L2a|LINE|L2 11471 NM_178273 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr9-6904 chr9 91119275 91119485 + 11.1 0.000 intron (NR_135306, intron 2 of 2) intron (NR_135306, intron 2 of 2) 318 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr1-11065 chr1 226041757 226041967 + 11.1 0.000 Intergenic Intergenic -20854 NM_002107 3020 Hs.533624 NM_002107 ENSG00000163041 H3F3A H3.3A|H3F3 H3 histone family member 3A protein-coding chr16-2703 chr16 84916510 84916720 + 11.1 0.000 Intergenic Intergenic 94920 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr11-3356 chr11 122138930 122139140 + 11.1 0.000 intron (NR_137184, intron 1 of 1) intron (NR_137184, intron 1 of 1) 7558 NR_029477 406882 NR_029477 ENSG00000198975 MIRLET7A2 LET7A2|MIRNLET7A2|let-7a-2 microRNA let-7a-2 ncRNA chrX-3325 chrX 124677913 124678123 + 11.1 0.000 intron (NM_014253, intron 5 of 30) intron (NM_014253, intron 5 of 30) 285799 NM_001163279 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr11-5915 chr11 14134893 14135103 + 11.1 0.000 intron (NM_006108, intron 5 of 15) 5S|rRNA|rRNA 172275 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr3-2555 chr3 58272244 58272454 + 11.1 0.000 intron (NM_001320126, intron 6 of 9) intron (NM_001320126, intron 6 of 9) -33896 NM_007042 11102 Hs.446320 NM_007042 ENSG00000163684 RPP14 P14 ribonuclease P/MRP subunit p14 protein-coding chr15-1049 chr15 50885972 50886182 + 11.1 0.000 Intergenic Intergenic -22606 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr7-1146 chr7 77428181 77428391 + 11.1 0.000 Intergenic Intergenic -11937 NM_001350897 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr9-3683 chr9 99878724 99878934 + 11.1 0.000 Intergenic Intergenic 27772 NR_038853 441461 Hs.163155 NR_038853 ENSG00000255145 STX17-AS1 - STX17 antisense RNA 1 ncRNA chr6-8081 chr6 124848983 124849193 + 11.1 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -113457 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr11-4595 chr11 134374242 134374452 + 11.1 0.000 intron (NM_001370461, intron 17 of 18) intron (NM_001370461, intron 17 of 18) 37571 NM_018644 27087 Hs.381050 NM_018644 ENSG00000109956 B3GAT1 CD57|GLCATP|GLCUATP|HNK1|LEU7|NK-1|NK1 beta-1,3-glucuronyltransferase 1 protein-coding chrX-1030 chrX 73917526 73917736 + 11.1 0.000 Intergenic Intergenic -26693 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator ncRNA chr5-2208 chr5 172693092 172693302 + 11.1 0.000 Intergenic Intergenic 31032 NR_049799 100847029 NR_049799 ENSG00000265160 MIR5003 - microRNA 5003 ncRNA chr7-4204 chr7 136718879 136719089 + 11.1 0.000 Intergenic Intergenic -149668 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr10-6128 chr10 133034031 133034241 + 11.1 0.000 Intergenic Intergenic 52561 NR_111905 100128127 Hs.694139 NR_111905 ADGRA1-AS1 GPR123-AS1 adhesion G protein-coupled receptor A1 antisense RNA 1 ncRNA chr4-555 chr4 67701031 67701241 + 11.1 0.000 promoter-TSS (NM_018227) promoter-TSS (NM_018227) 19 NM_018227 55236 Hs.212774 NM_018227 ENSG00000033178 UBA6 E1-L2|MOP-4|UBE1L2 ubiquitin like modifier activating enzyme 6 protein-coding chr6-5032 chr6 111322127 111322337 + 11.1 0.000 intron (NM_001286431, intron 29 of 34) intron (NM_001286431, intron 29 of 34) 62893 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr20-2415 chr20 21548347 21548557 + 11.1 0.000 Intergenic Intergenic -21572 NR_109880 101929625 Hs.542413 NR_109880 LINC01727 - long intergenic non-protein coding RNA 1727 ncRNA chr11-6978 chr11 116176286 116176496 + 11.1 0.000 Intergenic Intergenic -416191 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr9-5924 chr9 133156020 133156230 + 11.1 0.000 intron (NM_001288572, intron 3 of 6) intron (NM_001288572, intron 3 of 6) -6915 NM_001042368 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr5-5755 chr5 172424362 172424572 + 11.1 0.000 intron (NM_001017995, intron 1 of 12) intron (NM_001017995, intron 1 of 12) 30056 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr8-1426 chr8 102496288 102496498 + 11.1 0.000 Intergenic LTR78|LTR|ERV1 -55196 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr5-5694 chr5 163685837 163686047 + 11.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL 180323 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr6-3742 chr6 7541710 7541920 + 11.1 0.000 5' UTR (NM_001319034, exon 1 of 24) 5' UTR (NM_001319034, exon 1 of 24) 144 NM_001008844 1832 Hs.519873 NM_004415 ENSG00000096696 DSP DCWHKTA|DP desmoplakin protein-coding chr13-3262 chr13 37666049 37666259 + 11.1 0.000 intron (NM_003306, intron 5 of 10) LTR40A1|LTR|ERVL -67310 NM_001286666 10631 Hs.136348 NM_006475 ENSG00000133110 POSTN OSF-2|OSF2|PDLPOSTN|PN periostin protein-coding chr3-1784 chr3 20516291 20516501 + 11.1 0.000 Intergenic Intergenic 173928 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr11-4062 chr11 17531269 17531479 + 11.1 0.000 intron (NR_123738, intron 3 of 19) intron (NR_123738, intron 3 of 19) 13042 NM_005709 10083 Hs.502072 NM_005709 ENSG00000006611 USH1C AIE-75|DFNB18|DFNB18A|NY-CO-37|NY-CO-38|PDZ-45|PDZ-73|PDZ-73/NY-CO-38|PDZ73|PDZD7C|ush1cpst USH1 protein network component harmonin protein-coding chr6-4128 chr6 160992324 160992534 + 11.1 0.000 intron (NM_005922, intron 1 of 26) CpG 660 NM_005922 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr9-4519 chr9 71099054 71099264 + 11.1 0.000 intron (NM_001366143, intron 1 of 25) MLT1A0|LTR|ERVL-MaLR 22462 NM_001366148 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr18-2139 chr18 55500682 55500892 + 11.1 0.000 intron (NM_001348217, intron 2 of 18) intron (NM_001348217, intron 2 of 18) 9985 NM_001243231 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr4-1475 chr4 7255986 7256196 + 11.1 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -54359 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr17-4533 chr17 77043142 77043352 + 11.1 0.000 Intergenic Intergenic -45396 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr9-4921 chr9 12357212 12357422 + 11.1 0.000 Intergenic LTR16A|LTR|ERVL -336068 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chrX-750 chrX 17068883 17069093 + 11.1 0.000 intron (NM_001080975, intron 10 of 17) intron (NM_001080975, intron 10 of 17) 122330 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr6-2020 chr6 42200074 42200284 + 11.1 0.000 Intergenic L2a|LINE|L2 -5223 NM_002098 2979 Hs.446529 NM_002098 ENSG00000112599 GUCA1B GCAP 2|GCAP2|GUCA2|RP48 guanylate cyclase activator 1B protein-coding chr7-6158 chr7 127409639 127409849 + 11.1 0.000 Intergenic Intergenic -17036 NM_176814 168850 Hs.159006 NM_176814 ENSG00000048405 ZNF800 - zinc finger protein 800 protein-coding chr16-4209 chr16 12208507 12208717 + 11.1 0.000 intron (NM_032167, intron 14 of 20) AluJo|SINE|Alu 231878 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr1-8377 chr1 69948022 69948232 + 11.1 0.000 intron (NM_001370785, intron 8 of 26) MER44B|DNA|TcMar-Tigger 28805 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chr7-3915 chr7 124765253 124765463 + 11.1 0.000 5' UTR (NM_005302, exon 1 of 2) 5' UTR (NM_005302, exon 1 of 2) 434 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr14-1309 chr14 52863092 52863302 + 11.1 0.000 intron (NM_001134999, intron 12 of 15) intron (NM_001134999, intron 12 of 15) -71590 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding chr3-4515 chr3 106914224 106914434 + 11.1 0.000 Intergenic Intergenic 326309 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr1-4809 chr1 20640338 20640548 + 11.1 0.000 intron (NM_032409, intron 3 of 7) intron (NM_032409, intron 3 of 7) 6764 NR_106732 102464833 NR_106732 ENSG00000284005 MIR6084 hsa-mir-6084 microRNA 6084 ncRNA chr1-6071 chr1 95233312 95233522 + 11.1 0.000 promoter-TSS (NM_001128142) promoter-TSS (NM_001128142) 565 NR_125949 101928118 Hs.656443 NR_125948 ENSG00000226026 LOC101928118 - uncharacterized LOC101928118 ncRNA chr5-2372 chr5 82886820 82887030 + 11.1 0.000 Intergenic Intergenic -27089 NR_105016 102546175 NR_105016 ENSG00000281327 LINC01338 - long intergenic non-protein coding RNA 1338 ncRNA chr11-5506 chr11 83464250 83464460 + 11.1 0.000 intron (NM_001142699, intron 26 of 27) intron (NM_001142699, intron 26 of 27) -177948 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr6-2766 chr6 129946793 129947003 + 11.1 0.000 Intergenic HAL1ME|LINE|L1 -71471 NM_032438 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr7-5157 chr7 6247184 6247394 + 11.1 0.000 intron (NM_001367581, intron 1 of 13) L1M6|LINE|L1 25335 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr8-4421 chr8 108453506 108453716 + 11.1 0.000 intron (NR_138033, intron 4 of 9) intron (NR_138033, intron 4 of 9) 9987 NM_014673 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr4-1743 chr4 88283690 88283900 + 11.1 0.000 intron (NM_152542, intron 1 of 6) intron (NM_152542, intron 1 of 6) 766 NM_152542 152926 Hs.43744 NM_152542 ENSG00000163644 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent 1K protein-coding chr3-4522 chr3 115439370 115439580 + 11.1 0.000 Intergenic Intergenic -184035 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr5-1069 chr5 172641046 172641256 + 11.1 0.000 promoter-TSS (NM_001308177) promoter-TSS (NM_001308177) -112 NM_001308177 54492 Hs.91521 NM_001142651 ENSG00000214357 NEURL1B NEURL3|RNF67B|hNeur2|neur2 neuralized E3 ubiquitin protein ligase 1B protein-coding chr3-6976 chr3 167406926 167407136 + 11.1 0.000 intron (NR_126353, intron 3 of 3) intron (NR_126353, intron 3 of 3) 14235 NR_126353 104310350 Hs.581631 NR_126353 ENSG00000241669 LINC01327 TCONS_00005644 long intergenic non-protein coding RNA 1327 ncRNA chr12-5316 chr12 112669073 112669283 + 11.1 0.000 intron (NM_001347952, intron 1 of 21) MER91A|DNA|hAT-Tip100 25998 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr14-1409 chr14 63544653 63544863 + 11.1 0.000 TTS (NR_158218) TTS (NR_158218) -1363 NM_001354926 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr2-3294 chr2 84435783 84435993 + 11.1 0.000 intron (NM_003849, intron 5 of 8) LTR43B|LTR|ERV1 23392 NM_003849 8802 Hs.270428 NM_003849 ENSG00000163541 SUCLG1 GALPHA|MTDPS9|SUCLA1 succinate-CoA ligase alpha subunit protein-coding chr1-5019 chr1 75672794 75673004 + 11.1 0.000 Intergenic L1M1|LINE|L1 -51448 NM_001286044 34 Hs.445040 NM_000016 ENSG00000117054 ACADM ACAD1|MCAD|MCADH acyl-CoA dehydrogenase medium chain protein-coding chr10-8837 chr10 110316183 110316393 + 11.1 0.000 Intergenic Intergenic -11368 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr13-893 chr13 40453540 40453750 + 11.1 0.000 intron (NR_024507, intron 5 of 6) intron (NR_024507, intron 5 of 6) 27361 NR_024506 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr9-6761 chr9 21708337 21708547 + 11.1 0.000 Intergenic Intergenic -94194 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr15-3373 chr15 85649273 85649483 + 11.1 0.000 intron (NM_007200, intron 10 of 36) intron (NM_007200, intron 10 of 36) 29428 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr12-4911 chr12 67169235 67169445 + 11.1 0.000 Intergenic Intergenic -73056 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr1-10486 chr1 164498413 164498623 + 11.1 0.000 Intergenic Intergenic -60842 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr11-2042 chr11 66892219 66892429 + 11.1 0.000 intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) 15629 NM_022172 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding chrX-2599 chrX 106044197 106044407 + 11.1 0.000 Intergenic Intergenic -5575 NM_000354 6906 Hs.76838 NM_000354 ENSG00000123561 SERPINA7 TBG|TBGQTL serpin family A member 7 protein-coding chr12-3141 chr12 42828724 42828934 + 11.1 0.000 Intergenic Intergenic 136613 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr6-8604 chr6 167974621 167974831 + 11.1 0.000 Intergenic Intergenic 2213 NM_001129895 100128124 Hs.448059 NM_001129895 HGC6.3 - uncharacterized LOC100128124 protein-coding chr6-3415 chr6 106802268 106802478 + 11.1 0.000 Intergenic Intergenic -14832 NR_147986 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr15-1787 chr15 78034443 78034653 + 11.1 0.000 intron (NM_144572, intron 3 of 12) intron (NM_144572, intron 3 of 12) -40323 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr18-1067 chr18 33440169 33440379 + 11.1 0.000 intron (NM_001371120, intron 1 of 23) intron (NM_001371120, intron 1 of 23) 297 NM_001371121 chr18-2464 chr18 40945669 40945879 + 11.1 0.000 Intergenic Intergenic 574903 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr2-10770 chr2 41414759 41414969 + 11.1 0.000 Intergenic LTR41B|LTR|ERVL -462691 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr10-5277 chr10 68390806 68391016 + 11.1 0.000 intron (NR_103476, intron 7 of 18) AluJo|SINE|Alu 16278 NM_017987 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr1-12165 chr1 183373297 183373507 + 11.1 0.000 intron (NM_015039, intron 1 of 10) intron (NM_015039, intron 1 of 10) 44978 NM_015039 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr1-4054 chr1 204647607 204647817 + 11.1 0.000 intron (NM_201630, intron 1 of 1) intron (NM_201630, intron 1 of 1) 38026 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr3-4064 chr3 81602893 81603103 + 11.1 0.000 intron (NM_000158, intron 7 of 15) intron (NM_000158, intron 7 of 15) 158647 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr21-413 chr21 43804664 43804874 + 11.1 0.000 TTS (NR_026961) TTS (NR_026961) 7798 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chr1-2186 chr1 46533077 46533287 + 11.1 0.000 exon (NM_001357063, exon 3 of 3) exon (NM_001357063, exon 3 of 3) 2333 NM_001357063 105378696 NM_001357063 ENSG00000282881 TMEM275 - transmembrane protein 275 protein-coding chr14-1714 chr14 22532682 22532892 + 11.1 0.000 Intergenic Intergenic 24275 NR_146543 105370400 NR_146543 ENSG00000259054 LINC02332 - long intergenic non-protein coding RNA 2332 ncRNA chr11-5722 chr11 2254917 2255127 + 11.1 0.000 Intergenic L1ME3|LINE|L1 15930 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr5-3305 chr5 123115966 123116176 + 11.1 0.000 intron (NM_001136239, intron 3 of 7) intron (NM_001136239, intron 3 of 7) -25755 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr6-5100 chr6 119613142 119613352 + 11.1 0.000 intron (NR_134600, intron 2 of 3) X6A_LINE|LINE|CR1 63439 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr5-1089 chr5 75717466 75717676 + 11.1 0.000 promoter-TSS (NM_001099271) promoter-TSS (NM_001099271) -134 NM_001099271 134359 Hs.432726 NM_152408 ENSG00000152359 POC5 C5orf37 POC5 centriolar protein protein-coding chr2-3549 chr2 20451482 20451692 + 11.1 0.000 Intergenic Intergenic 4513 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr12-3721 chr12 12656023 12656233 + 11.1 0.000 Intergenic Intergenic 40055 NM_006143 2842 Hs.657862 NM_006143 ENSG00000183150 GPR19 - G protein-coupled receptor 19 protein-coding chr2-3658 chr2 168759223 168759433 + 11.1 0.000 intron (NM_001256126, intron 8 of 10) intron (NM_001256126, intron 8 of 10) 27101 NR_045786 100861402 Hs.506829 NR_045786 ENSG00000227617 CERS6-AS1 - CERS6 antisense RNA 1 ncRNA chr2-7137 chr2 191994917 191995127 + 11.1 0.000 intron (NM_001305134, intron 7 of 9) intron (NM_001305134, intron 7 of 9) -147934 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr15-4690 chr15 65652156 65652366 + 11.1 0.000 intron (NM_001254740, intron 5 of 6) intron (NM_001254740, intron 5 of 6) 9382 NM_001254740 9187 Hs.173092 NM_004727 ENSG00000074621 SLC24A1 CSNB1D|HsT17412|NCKX|NCKX1|RODX solute carrier family 24 member 1 protein-coding chr16-1520 chr16 47018227 47018437 + 11.1 0.000 Intergenic Intergenic -44658 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr14-1924 chr14 105531197 105531407 + 11.1 0.000 promoter-TSS (NR_135205) promoter-TSS (NR_135205) -553 NR_135205 105370697 Hs.148580 NR_135205 LOC105370697 - uncharacterized LOC105370697 ncRNA chr19-3248 chr19 1582156 1582366 + 11.1 0.000 intron (NM_001281454, intron 4 of 6) intron (NM_001281454, intron 4 of 6) 10604 NM_001281453 53615 Hs.178728 NM_003926 ENSG00000071655 MBD3 - methyl-CpG binding domain protein 3 protein-coding chr3-6826 chr3 147435958 147436168 + 11.1 0.000 intron (NR_121655, intron 1 of 2) Tigger3b|DNA|TcMar-Tigger 14736 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr7-2845 chr7 104269175 104269385 + 11.1 0.000 Intergenic LTR16B2|LTR|ERVL -59376 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr17-2138 chr17 30319786 30319996 + 11.1 0.000 intron (NM_206832, intron 4 of 6) MamGypLTR1a|LTR|Gypsy 14166 NM_206832 388364 Hs.371005 NM_206832 ENSG00000182271 TMIGD1 TMIGD|UNQ9372 transmembrane and immunoglobulin domain containing 1 protein-coding chr1-4896 chr1 37319879 37320089 + 11.1 0.000 Intergenic Intergenic 154459 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr1-5792 chr1 173202367 173202577 + 11.1 0.000 intron (NM_003326, intron 1 of 2) intron (NM_003326, intron 1 of 2) 3060 NM_001297562 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chrX-717 chrX 119402260 119402470 + 11.1 0.000 intron (NM_145305, intron 1 of 4) intron (NM_145305, intron 1 of 4) 3029 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr1-6627 chr1 43465231 43465441 + 11.1 0.000 Intergenic LTR79|LTR|ERVL -11347 NM_001190880 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr5-4006 chr5 26047061 26047271 + 11.1 0.000 Intergenic L1P4|LINE|L1 856213 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr3-5800 chr3 28017865 28018075 + 11.1 0.000 Intergenic L1MDa|LINE|L1 -183834 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr11-3272 chr11 76513215 76513425 + 11.1 0.000 intron (NM_001300942, intron 10 of 21) intron (NM_001300942, intron 10 of 21) 68295 NM_020193 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding chr14-3270 chr14 79364063 79364273 + 11.1 0.000 intron (NM_001105250, intron 1 of 6) intron (NM_001105250, intron 1 of 6) 84788 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr12-5119 chr12 97256090 97256300 + 11.1 0.000 Intergenic Intergenic -206581 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr9-2184 chr9 132875157 132875367 + 11.1 0.000 intron (NM_001317959, intron 1 of 14) intron (NM_001317959, intron 1 of 14) -3082 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr4-3409 chr4 56522628 56522838 + 11.1 0.000 intron (NM_206919, intron 3 of 3) intron (NM_206919, intron 3 of 3) -7873 NM_001256475 100506564 Hs.573073 NM_001256475 ENSG00000249693 THEGL - theg spermatid protein like protein-coding chr13-3543 chr13 24068617 24068827 + 11.1 0.000 intron (NM_001286792, intron 3 of 14) L1PA13|LINE|L1 88920 NR_104595 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr5-3685 chr5 179199020 179199230 + 11.1 0.000 intron (NM_014244, intron 4 of 21) intron (NM_014244, intron 4 of 21) 138752 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr11-9390 chr11 56984626 56984836 + 11.1 0.000 Intergenic MER61-int|LTR|ERV1 -4183 NM_001005323 390181 Hs.554520 NM_001005323 ENSG00000181273 OR5AK2 - olfactory receptor family 5 subfamily AK member 2 protein-coding chr10-5936 chr10 121518789 121518999 + 11.1 0.000 intron (NR_073009, intron 5 of 16) intron (NR_073009, intron 5 of 16) 12420 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr2-5876 chr2 240577530 240577740 + 11.1 0.000 exon (NM_018226, exon 11 of 11) exon (NM_018226, exon 11 of 11) 8681 NR_103792 101752400 Hs.585987 NR_103792 ENSG00000260942 CAPN10-DT CAPN10-AS1|locus959 CAPN10 divergent transcript ncRNA chr1-5172 chr1 168636770 168636980 + 11.1 0.000 Intergenic MER65C|LTR|ERV1 60270 NM_002995 6375 Hs.546295 NM_002995 ENSG00000143184 XCL1 ATAC|LPTN|LTN|SCM-1|SCM-1a|SCM1|SCM1A|SCYC1 X-C motif chemokine ligand 1 protein-coding chr10-5177 chr10 59031693 59031903 + 11.1 0.000 Intergenic Intergenic 32280 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA chr1-9740 chr1 54219695 54219905 + 11.1 0.000 intron (NM_001330602, intron 6 of 6) intron (NM_001330602, intron 6 of 6) -16643 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr16-3071 chr16 59898089 59898299 + 11.1 0.000 intron (NR_110917, intron 1 of 3) L2c|LINE|L2 42841 NR_110917 101927580 Hs.552235 NR_110917 ENSG00000261807 LINC02141 - long intergenic non-protein coding RNA 2141 ncRNA chr2-5176 chr2 32041585 32041795 + 11.1 0.000 Intergenic L2c|LINE|L2 -1855 NM_032574 84661 Hs.531788 NM_032574 ENSG00000162961 DPY30 Cps25|HDPY-30|Saf19 dpy-30 histone methyltransferase complex regulatory subunit protein-coding chr17-2308 chr17 43945526 43945736 + 11.1 0.000 Intergenic AluSz|SINE|Alu -3155 NM_002722 5539 Hs.558368 NM_002722 ENSG00000108849 PPY PNP|PP pancreatic polypeptide protein-coding chr1-5020 chr1 76862533 76862743 + 11.1 0.000 Intergenic L2a|LINE|L2 -4842 NM_001320274 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr3-10184 chr3 119028016 119028226 + 11.1 0.000 intron (NM_001353319, intron 1 of 7) intron (NM_001353319, intron 1 of 7) 6725 NM_001353323 152404 Hs.112873 NM_152538 ENSG00000144847 IGSF11 BT-IgSF|CT119|CXADRL1|Igsf13|VSIG3 immunoglobulin superfamily member 11 protein-coding chr3-2728 chr3 120177316 120177526 + 11.1 0.000 intron (NM_001168271, intron 7 of 8) intron (NM_001168271, intron 7 of 8) 66874 NM_153002 165829 Hs.333358 NM_153002 ENSG00000175697 GPR156 GABABL|PGR28 G protein-coupled receptor 156 protein-coding chr22-1982 chr22 20056106 20056316 + 11.1 0.000 intron (NM_001283215, intron 6 of 6) intron (NM_001283215, intron 6 of 6) 23072 NR_029706 406961 NR_029706 ENSG00000208023 MIR185 MIRN185|miR-185 microRNA 185 ncRNA chr18-568 chr18 46250697 46250907 + 11.1 0.000 intron (NM_145055, intron 3 of 4) L2b|LINE|L2 76768 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr14-2975 chr14 51065504 51065714 + 11.1 0.000 intron (NM_015163, intron 1 of 9) intron (NM_015163, intron 1 of 9) 30095 NM_015163 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr18-887 chr18 47323224 47323434 + 11.1 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 37605 NR_147192 110175910 Hs.639112 NR_147192 ENSG00000267761 MIR4527HG - MIR4527 host gene ncRNA chr4-5579 chr4 166896973 166897183 + 11.1 0.000 intron (NM_001251967, intron 2 of 7) L1MEd|LINE|L1 337348 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr5-8061 chr5 93513201 93513411 + 11.1 0.000 intron (NR_109825, intron 5 of 8) L1PA16|LINE|L1 58037 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chrX-2796 chrX 133536633 133536843 + 11.1 0.000 intron (NM_001164619, intron 6 of 6) intron (NM_001164619, intron 6 of 6) -121249 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr17-2986 chr17 69300344 69300554 + 11.1 0.000 intron (NM_018672, intron 8 of 37) intron (NM_018672, intron 8 of 37) 15184 NM_018672 23461 Hs.731824 NM_018672 ENSG00000154265 ABCA5 ABC13|EST90625|HTC3 ATP binding cassette subfamily A member 5 protein-coding chr20-2515 chr20 34368449 34368659 + 11.1 0.000 intron (NM_001257137, intron 1 of 25) intron (NM_001257137, intron 1 of 25) 5281 NM_031483 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr2-13647 chr2 161039161 161039371 + 11.1 0.000 Intergenic MER117|DNA|hAT-Charlie -97689 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr11-5482 chr11 77312039 77312249 + 11.1 0.000 Intergenic Intergenic -10478 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr3-5106 chr3 49494119 49494329 + 11.1 0.000 intron (NM_001177641, intron 2 of 3) intron (NM_001177641, intron 2 of 3) 24092 NM_001177640 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr1-8581 chr1 177414055 177414265 + 11.1 0.000 Intergenic Intergenic 62574 NR_126001 102724661 Hs.146628 NR_126001 LINC01645 - long intergenic non-protein coding RNA 1645 ncRNA chr10-4917 chr10 22433975 22434185 + 11.1 0.000 Intergenic MARNA|DNA|TcMar-Mariner 3849 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr3-3152 chr3 169610969 169611179 + 11.1 0.000 intron (NM_001366473, intron 1 of 15) MER5A|DNA|hAT-Charlie 52638 NM_001366466 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr10-2961 chr10 59301106 59301316 + 11.1 0.000 intron (NM_001347852, intron 5 of 12) MamSINE1|SINE|tRNA-RTE 61338 NM_198215 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr7-1466 chr7 100720048 100720258 + 11.1 0.000 promoter-TSS (NM_000799) promoter-TSS (NM_000799) -315 NM_000799 2056 Hs.2303 NM_000799 ENSG00000130427 EPO DBAL|ECYT5|EP|MVCD2 erythropoietin protein-coding chr17-3108 chr17 16040810 16041020 + 11.1 0.000 intron (NM_001190440, intron 41 of 44) L3|LINE|CR1 41091 NM_001271420 54902 Hs.462316 NM_017775 ENSG00000011295 TTC19 2010204O13Rik|MC3DN2 tetratricopeptide repeat domain 19 protein-coding chr7-2672 chr7 7956033 7956243 + 11.1 0.000 intron (NR_110018, intron 2 of 4) intron (NR_110018, intron 2 of 4) 12614 NR_110018 100505921 Hs.634989 NR_110018 LOC100505921 - uncharacterized LOC100505921 ncRNA chr3-4107 chr3 109548640 109548850 + 11.1 0.000 Intergenic Intergenic -54083 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chrX-2365 chrX 67458471 67458681 + 11.1 0.000 Intergenic L1PA8A|LINE|L1 -85445 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr1-10701 chr1 191497331 191497541 + 11.1 0.000 Intergenic Intergenic -268938 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr7-6758 chr7 12127395 12127605 + 11.1 0.000 Intergenic Intergenic -83794 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr2-8030 chr2 70663537 70663747 + 11.1 0.000 exon (NM_001185054, exon 16 of 16) exon (NM_001185054, exon 16 of 16) 104073 NM_001185054 119 Hs.66187 NM_001617 ENSG00000075340 ADD2 ADDB adducin 2 protein-coding chr17-2936 chr17 53626281 53626491 + 11.1 0.000 Intergenic MER103C|DNA|hAT-Charlie -196541 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr9-5230 chr9 76564463 76564673 + 11.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 63935 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr2-7496 chr2 18445632 18445842 + 11.1 0.000 Intergenic Intergenic 114916 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr7-1780 chr7 75073171 75073381 + 11.1 0.000 5' UTR (NM_001363447, exon 1 of 11) 5' UTR (NM_001363447, exon 1 of 11) 526 NM_001363447 81554 Hs.529623 NM_030798 ENSG00000274523 RCC1L WBSCR16 RCC1 like protein-coding chr10-8031 chr10 63356108 63356318 + 11.1 0.000 intron (NM_001322258, intron 2 of 24) intron (NM_001322258, intron 2 of 24) 16835 NR_031566 100302150 NR_031566 ENSG00000221063 MIR1296 MIRN1296|hsa-mir-1296|mir-1296 microRNA 1296 ncRNA chr9-2462 chr9 32859784 32859994 + 11.1 0.000 Intergenic HERVL-int|LTR|ERVL 76349 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr2-10332 chr2 156876911 156877121 + 11.1 0.000 Intergenic MER112|DNA|hAT-Charlie -380689 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr8-3405 chr8 67337588 67337798 + 11.1 0.000 intron (NM_006421, intron 1 of 38) L2a|LINE|L2 6088 NM_006421 10565 Hs.656902 NM_006421 ENSG00000066777 ARFGEF1 ARFGEP1|BIG1|P200 ADP ribosylation factor guanine nucleotide exchange factor 1 protein-coding chr1-4339 chr1 64897710 64897920 + 11.1 0.000 intron (NM_001321852, intron 1 of 24) intron (NM_001321852, intron 1 of 24) 68734 NM_002227 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr5-4573 chr5 23817257 23817467 + 11.1 0.000 Intergenic Intergenic -133986 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA chrX-871 chrX 153499967 153500177 + 11.1 0.000 intron (NM_001711, intron 1 of 7) intron (NM_001711, intron 1 of 7) -4607 NR_073156 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr15-1196 chr15 41940579 41940789 + 11.1 0.000 intron (NM_139265, intron 3 of 5) intron (NM_139265, intron 3 of 5) 19267 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr1-7878 chr1 111589301 111589511 + 11.1 0.000 intron (NM_001370216, intron 1 of 7) FLAM_A|SINE|Alu 18912 NR_034126 100129269 Hs.689728 NR_034126 LINC01160 - long intergenic non-protein coding RNA 1160 ncRNA chr15-3093 chr15 63979319 63979529 + 11.1 0.000 intron (NM_014326, intron 3 of 11) intron (NM_014326, intron 3 of 11) 51150 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr1-4570 chr1 88891471 88891681 + 11.1 0.000 promoter-TSS (NM_001514) promoter-TSS (NM_001514) -9 NM_001514 2959 Hs.481852 NM_001514 ENSG00000137947 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding chr5-5971 chr5 119527413 119527623 + 11.1 0.000 intron (NM_001199291, intron 21 of 24) intron (NM_001199291, intron 21 of 24) 75021 NM_001199291 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr10-4365 chr10 34889227 34889437 + 11.1 0.000 Intergenic LTR3B_|LTR|ERVK 73564 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr12-6733 chr12 5707933 5708143 + 11.1 0.000 intron (NM_001278596, intron 15 of 25) L2b|LINE|L2 213906 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr3-6200 chr3 61725974 61726184 + 11.1 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 164508 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr5-2630 chr5 172112009 172112219 + 11.1 0.000 intron (NM_005990, intron 4 of 18) L1ME3G|LINE|L1 76110 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr14-1959 chr14 33686148 33686358 + 11.1 0.000 intron (NM_001165893, intron 5 of 10) intron (NM_001165893, intron 5 of 10) -22684 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr2-5972 chr2 55419110 55419320 + 11.1 0.000 5' UTR (NM_018084, exon 1 of 32) 5' UTR (NM_018084, exon 1 of 32) 641 NM_018084 55704 Hs.292925 NM_018084 ENSG00000115355 CCDC88A APE|GIRDIN|GIV|GRDN|HkRP1|KIAA1212|PEHO|PEHOL coiled-coil domain containing 88A protein-coding chr2-8268 chr2 100875913 100876123 + 11.1 0.000 intron (NM_002518, intron 1 of 20) intron (NM_002518, intron 1 of 20) 55879 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr19-3843 chr19 15339018 15339228 + 11.1 0.000 Intergenic Intergenic -6584 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr11-3374 chr11 125923100 125923310 + 11.1 0.000 3' UTR (NM_001330438, exon 12 of 12) 3' UTR (NM_001330438, exon 12 of 12) 18697 NM_013264 29118 Hs.420263 NM_013264 ENSG00000109832 DDX25 GRTH DEAD-box helicase 25 protein-coding chr19-4621 chr19 13595774 13595984 + 11.1 0.000 Intergenic L1MB3|LINE|L1 -89400 NM_023035 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr8-3195 chr8 117474492 117474702 + 11.1 0.000 Intergenic Intergenic -46116 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr6-4228 chr6 5155934 5156144 + 11.1 0.000 intron (NM_001164841, intron 2 of 3) intron (NM_001164841, intron 2 of 3) -7717 NR_037462 100500900 NR_037462 ENSG00000265083 MIR3691 mir-3691 microRNA 3691 ncRNA chr16-1462 chr16 87966895 87967105 + 11.1 0.000 intron (NM_001173542, intron 1 of 12) intron (NM_001173542, intron 1 of 12) -3018 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chrX-561 chrX 39853762 39853972 + 11.1 0.000 Intergenic Intergenic 16306 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr3-2903 chr3 50085107 50085317 + 11.1 0.000 Intergenic SVA_D|Retroposon|SVA -3707 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr3-4146 chr3 123194544 123194754 + 11.1 0.000 Intergenic Intergenic -7294 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr12-3018 chr12 131681076 131681286 + 11.1 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -29909 NM_001261411 6433 Hs.308171 NM_004592 ENSG00000061936 SFSWAP SFRS8|SWAP splicing factor SWAP protein-coding chr12-4225 chr12 106480944 106481154 + 11.1 0.000 intron (NM_001160708, intron 23 of 27) L2a|LINE|L2 -101858 NM_213594 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr7-8917 chr7 94771604 94771814 + 11.1 0.000 Intergenic L1MC3|LINE|L1 115339 NM_001184962 23089 Hs.147492 NM_015068 ENSG00000242265 PEG10 EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1 paternally expressed 10 protein-coding chr4-1174 chr4 2652939 2653149 + 11.1 0.000 intron (NM_001256668, intron 5 of 19) intron (NM_001256668, intron 5 of 19) 27612 NM_003704 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr14-3308 chr14 85675832 85676042 + 11.1 0.000 Intergenic Intergenic 142588 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr10-2459 chr10 18140099 18140309 + 11.1 0.000 promoter-TSS (NM_201572) promoter-TSS (NM_201572) -220 NM_201596 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr4-5796 chr4 81079822 81080032 + 11.1 0.000 Intergenic L1PA15|LINE|L1 49219 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr1-5423 chr1 28974117 28974327 + 11.1 0.000 intron (NM_001166006, intron 1 of 14) L3|LINE|CR1 59646 NM_001166006 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr6-2797 chr6 148723697 148723907 + 11.1 0.000 Intergenic L1M4a1|LINE|L1 -23228 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr1-6340 chr1 5892302 5892512 + 11.1 0.000 intron (NR_111987, intron 16 of 32) L2b|LINE|L2 -29666 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr3-5929 chr3 43287359 43287569 + 11.1 0.000 intron (NM_001330750, intron 1 of 4) intron (NM_001330750, intron 1 of 4) 924 NM_017719 54861 Hs.476052 NM_017719 ENSG00000163788 SNRK HSNFRK SNF related kinase protein-coding chr1-7552 chr1 199463665 199463875 + 11.1 0.000 Intergenic L1M1|LINE|L1 315172 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr12-5953 chr12 82307288 82307498 + 11.1 0.000 Intergenic L1MCa|LINE|L1 50994 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr11-2575 chr11 118524393 118524603 + 11.1 0.000 3' UTR (NM_001197104, exon 36 of 36) 3' UTR (NM_001197104, exon 36 of 36) -2935 NM_001346096 143941 Hs.653449 NM_001080441 ENSG00000172425 TTC36 HBP21 tetratricopeptide repeat domain 36 protein-coding chr22-906 chr22 27461547 27461757 + 11.1 0.000 Intergenic Intergenic 151001 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr7-3826 chr7 98394416 98394626 + 11.1 0.000 intron (NM_018842, intron 1 of 13) intron (NM_018842, intron 1 of 13) 6569 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr1-8019 chr1 225828917 225829127 + 11.1 0.000 intron (NM_001136018, intron 2 of 8) intron (NM_001136018, intron 2 of 8) 3668 NM_000120 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr17-4719 chr17 32323164 32323374 + 11.1 0.000 3' UTR (NM_001330181, exon 8 of 8) 3' UTR (NM_001330181, exon 8 of 8) 18904 NM_022344 64149 Hs.655257 NM_022344 ENSG00000108666 C17orf75 NJMU-R1|SRI2 chromosome 17 open reading frame 75 protein-coding chr11-8528 chr11 126804653 126804863 + 11.1 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -135988 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr16-3182 chr16 83909275 83909485 + 11.1 0.000 intron (NM_012213, intron 3 of 4) intron (NM_012213, intron 3 of 4) 10265 NM_012213 23417 Hs.644610 NM_012213 ENSG00000103150 MLYCD MCD malonyl-CoA decarboxylase protein-coding chr4-3714 chr4 66809697 66809907 + 11.1 0.000 Intergenic Intergenic 532978 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr2-6427 chr2 149050058 149050268 + 11.1 0.000 intron (NM_001317006, intron 1 of 4) intron (NM_001317006, intron 1 of 4) 11464 NM_177964 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr5-4580 chr5 25990065 25990275 + 11.1 0.000 Intergenic L1PA5|LINE|L1 799217 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr10-4385 chr10 45155917 45156127 + 11.1 0.000 intron (NR_033891, intron 1 of 7) intron (NR_033891, intron 1 of 7) 1360 NR_033891 338579 Hs.666134 NR_033891 ANKRD30BP3 - ankyrin repeat domain 30B pseudogene 3 pseudo chr2-4234 chr2 219277844 219278054 + 11.1 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -1417 NM_001039550 3300 Hs.77768 NM_006736 ENSG00000135924 DNAJB2 CMT2T|DSMA5|HSJ-1|HSJ1|HSPF3 DnaJ heat shock protein family (Hsp40) member B2 protein-coding chr18-1755 chr18 8700000 8700210 + 11.1 0.000 intron (NR_120598, intron 1 of 1) intron (NR_120598, intron 1 of 1) 7516 NR_120598 100287082 Hs.439434 NR_120598 ENSG00000265962 GACAT2 MTCL1-AS1|MTCL1AS1 gastric cancer associated transcript 2 ncRNA chr7-4466 chr7 134931595 134931805 + 11.1 0.000 intron (NM_033139, intron 2 of 12) intron (NM_033139, intron 2 of 12) 40242 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr10-4147 chr10 81019265 81019475 + 11.1 0.000 Intergenic MER20|DNA|hAT-Charlie 369573 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr3-5797 chr3 27787677 27787887 + 11.1 0.000 Intergenic MIR1_Amn|SINE|MIR -9806 NR_146630 105377007 NR_146630 LINC01980 - long intergenic non-protein coding RNA 1980 ncRNA chr10-2090 chr10 119211901 119212111 + 11.1 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 4435 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr22-1713 chr22 18066010 18066220 + 11.1 0.000 Intergenic Intergenic -11805 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chrX-3204 chrX 47235762 47235972 + 11.1 0.000 intron (NM_001371072, intron 1 of 20) intron (NM_001371072, intron 1 of 20) 2858 NM_001371072 chr5-4597 chr5 30991485 30991695 + 11.1 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -202096 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr15-2815 chr15 38555377 38555587 + 11.1 0.000 intron (NM_001306086, intron 2 of 14) intron (NM_001306086, intron 2 of 14) 9332 NM_001306086 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr13-2100 chr13 79406647 79406857 + 11.1 0.000 promoter-TSS (NM_001286631) promoter-TSS (NM_001286631) 443 NR_038991 100505538 Hs.600720 NR_038991 ENSG00000227354 RBM26-AS1 - RBM26 antisense RNA 1 ncRNA chr20-1094 chr20 62839757 62839967 + 11.1 0.000 intron (NM_001853, intron 31 of 31) intron (NM_001853, intron 31 of 31) -4704 NM_080750 100132911 NM_080750 DPH3P1 C20orf143|DPH3B|ZCSL1 diphthamide biosynthesis 3 pseudogene 1 protein-coding chr15-1884 chr15 68768429 68768639 + 11.1 0.000 Intergenic L1ME2|LINE|L1 33391 NR_036197 100422971 NR_036197 ENSG00000265195 MIR4312 - microRNA 4312 ncRNA chr2-9747 chr2 79166889 79167099 + 11.1 0.000 Intergenic HERV17-int|LTR|ERV1 -7241 NM_138937 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding chr12-4200 chr12 98238583 98238793 + 11.1 0.000 Intergenic Intergenic 218457 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr1-2862 chr1 179402080 179402290 + 11.1 0.000 intron (NR_073544, intron 11 of 25) THE1B|LTR|ERVL-MaLR 36141 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr5-4275 chr5 142176002 142176212 + 11.1 0.000 Intergenic L2b|LINE|L2 67328 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr6-4014 chr6 121851171 121851381 + 11.1 0.000 Intergenic Intergenic 415630 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr10-1097 chr10 71759432 71759642 + 11.0 0.000 intron (NM_022153, intron 3 of 6) AluSz|SINE|Alu 13983 NM_022153 64115 Hs.47382 NM_022153 ENSG00000107738 VSIR B7-H5|B7H5|C10orf54|DD1alpha|Dies1|GI24|PD-1H|PP2135|SISP1|VISTA V-set immunoregulatory receptor protein-coding chr9-1974 chr9 108569795 108570005 + 11.0 0.000 Intergenic Intergenic 286086 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr3-1390 chr3 98778854 98779064 + 11.0 0.000 intron (NM_001271147, intron 6 of 9) MER91C|DNA|hAT-Tip100 15652 NM_001323368 10402 Hs.148716 NM_006100 ENSG00000064225 ST3GAL6 SIAT10|ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding chr6-1771 chr6 77634188 77634398 + 11.0 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -15981 NM_001282136 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr13-4162 chr13 86800749 86800959 + 11.0 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -111066 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr5-3046 chr5 19616886 19617096 + 11.0 0.000 intron (NM_001349559, intron 5 of 12) MLT1A|LTR|ERVL-MaLR 269281 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr7-2662 chr7 5447887 5448097 + 11.0 0.000 Intergenic Intergenic -19065 NM_001354886 100129484 Hs.147507 NM_001354886 LOC100129484 - uncharacterized LOC100129484 protein-coding chr14-2572 chr14 37879469 37879679 + 11.0 0.000 Intergenic MIRb|SINE|MIR 22550 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr20-813 chr20 44582355 44582565 + 11.0 0.000 promoter-TSS (NM_001281445) promoter-TSS (NM_001281445) -119 NM_001281445 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr1-2443 chr1 22832088 22832298 + 11.0 0.000 intron (NM_004442, intron 3 of 15) MIRb|SINE|MIR 31033 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr1-12581 chr1 31804149 31804359 + 11.0 0.000 intron (NM_001281988, intron 1 of 14) MIR|SINE|MIR 11797 NM_001281988 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chr1-3529 chr1 202417158 202417368 + 11.0 0.000 intron (NM_002481, intron 2 of 23) intron (NM_002481, intron 2 of 23) -45451 NM_032104 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr7-1863 chr7 6706074 6706284 + 11.0 0.000 intron (NM_006956, intron 1 of 5) intron (NM_006956, intron 1 of 5) 768 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding chr1-8751 chr1 246317808 246318018 + 11.0 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 99499 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr11-1423 chr11 57457426 57457636 + 11.0 0.000 Intergenic Intergenic -2997 NM_178570 349667 Hs.502618 NM_178570 ENSG00000186907 RTN4RL2 NGRH1|NgR2 reticulon 4 receptor like 2 protein-coding chr9-3074 chr9 3651068 3651278 + 11.0 0.000 Intergenic Intergenic -16913 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chr1-4785 chr1 16120191 16120401 + 11.0 0.000 Intergenic Intergenic 35773 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr10-6028 chr10 126334786 126334996 + 11.0 0.000 intron (NM_001288974, intron 1 of 18) MIRc|SINE|MIR 53586 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding KI270435.1-1 KI270435.1 92758 92968 + 11.0 0.000 NA NA NA NA KI270729.1-11 KI270729.1 25828 26038 + 11.0 0.000 NA NA NA NA chr7-2470 chr7 1669031 1669241 + 11.0 0.000 Intergenic CpG -18983 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr1-5035 chr1 85411783 85411993 + 11.0 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) -7382 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr6-6968 chr6 18147224 18147434 + 11.0 0.000 intron (NM_001346818, intron 3 of 7) intron (NM_001346818, intron 3 of 7) 7840 NM_001346817 7172 Hs.444319 NM_000367 ENSG00000137364 TPMT TPMTD thiopurine S-methyltransferase protein-coding chr12-1711 chr12 10190727 10190937 + 11.0 0.000 3' UTR (NM_153022, exon 4 of 4) 3' UTR (NM_153022, exon 4 of 4) 11800 NM_153022 120939 Hs.226422 NM_153022 ENSG00000165685 TMEM52B C12orf59 transmembrane protein 52B protein-coding chr4-1791 chr4 7829070 7829280 + 11.0 0.000 intron (NM_198595, intron 6 of 16) THE1C|LTR|ERVL-MaLR 43133 NM_001371090 chr3-4263 chr3 148776220 148776430 + 11.0 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 46145 NM_032049 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr22-3330 chr22 21920499 21920709 + 11.0 0.000 3' UTR (NM_014634, exon 8 of 8) 3' UTR (NM_014634, exon 8 of 8) -17633 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr10-2413 chr10 132648242 132648452 + 11.0 0.000 intron (NM_005539, intron 3 of 15) intron (NM_005539, intron 3 of 15) -32928 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr10-4927 chr10 24238663 24238873 + 11.0 0.000 intron (NM_019590, intron 2 of 20) intron (NM_019590, intron 2 of 20) 29630 NM_019590 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr7-9660 chr7 151490315 151490525 + 11.0 0.000 intron (NM_005614, intron 2 of 7) intron (NM_005614, intron 2 of 7) 29475 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr1-8537 chr1 157865696 157865906 + 11.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -23993 NM_001347698 922 Hs.134035 NM_005894 ENSG00000073754 CD5L AIM|API6|CT-2|PRO229|SP-ALPHA|Spalpha|hAIM CD5 molecule like protein-coding chr1-3840 chr1 27638145 27638355 + 11.0 0.000 Intergenic L2c|LINE|L2 -3065 NM_005248 2268 Hs.1422 NM_005248 ENSG00000000938 FGR SRC2|c-fgr|c-src2|p55-Fgr|p55c-fgr|p58-Fgr|p58c-fgr FGR proto-oncogene, Src family tyrosine kinase protein-coding chrX-1443 chrX 67145311 67145521 + 11.0 0.000 Intergenic AluSx|SINE|Alu -398605 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr1-9990 chr1 83493863 83494073 + 11.0 0.000 Intergenic Intergenic 47914 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr4-5602 chr4 1084950 1085160 + 11.0 0.000 intron (NM_001366918, intron 5 of 10) intron (NM_001366918, intron 5 of 10) 28509 NM_194439 285498 Hs.248290 NM_194439 ENSG00000178222 RNF212 ZHP3 ring finger protein 212 protein-coding chr9-1939 chr9 21672746 21672956 + 11.0 0.000 Intergenic Intergenic -113053 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr12-2664 chr12 33259245 33259455 + 11.0 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 180469 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding chr11-4192 chr11 61675647 61675857 + 11.0 0.000 Intergenic Intergenic -4639 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr2-9071 chr2 202003150 202003360 + 11.0 0.000 Intergenic Intergenic -31332 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr9-3385 chr9 128835883 128836093 + 11.0 0.000 intron (NM_001352989, intron 8 of 12) intron (NM_001352989, intron 8 of 12) -6194 NM_016390 51490 Hs.224137 NM_016390 ENSG00000198917 SPOUT1 C9orf114|CENP-32|CENP32|HSPC109 SPOUT domain containing methyltransferase 1 protein-coding chr10-2188 chr10 17836753 17836963 + 11.0 0.000 intron (NM_002438, intron 4 of 29) AluSq2|SINE|Alu -8249 NR_030167 574445 NR_030167 ENSG00000207938 MIR511 MIR511-1|MIR511-2|MIRN511-1|MIRN511-2|hsa-mir-511|hsa-mir-511-2|mir-511 microRNA 511 ncRNA chr1-6770 chr1 77978133 77978343 + 11.0 0.000 promoter-TSS (NM_001317102) promoter-TSS (NM_001317102) 834 NR_130152 8880 Hs.567380 NM_003902 ENSG00000162613 FUBP1 FBP|FUBP|hDH V far upstream element binding protein 1 protein-coding chr21-365 chr21 41467497 41467707 + 11.0 0.000 intron (NM_001135099, intron 13 of 13) intron (NM_001135099, intron 13 of 13) 35552 NM_001282920 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding chr16-6992 chr16 87521653 87521863 + 11.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 27571 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr2-7101 chr2 175435107 175435317 + 11.0 0.000 Intergenic Intergenic -253502 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr12-2983 chr12 116276468 116276678 + 11.0 0.000 intron (NM_015335, intron 1 of 30) intron (NM_015335, intron 1 of 30) 613 NM_015335 23389 Hs.603766 NM_015335 ENSG00000123066 MED13L MRFACD|PROSIT240|THRAP2|TRAP240L mediator complex subunit 13L protein-coding chr17-5762 chr17 60602145 60602355 + 11.0 0.000 intron (NM_003620, intron 1 of 5) intron (NM_003620, intron 1 of 5) 2067 NM_003620 8493 Hs.286073 NM_003620 ENSG00000170836 PPM1D IDDGIP|PP2C-DELTA|WIP1 protein phosphatase, Mg2+/Mn2+ dependent 1D protein-coding chr12-7507 chr12 68268009 68268219 + 11.0 0.000 Intergenic Intergenic -14510 NM_020525 50616 Hs.287369 NM_020525 ENSG00000127318 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding chr12-3393 chr12 104134132 104134342 + 11.0 0.000 intron (NM_006166, intron 2 of 7) intron (NM_006166, intron 2 of 7) 3973 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr2-6412 chr2 136727692 136727902 + 11.0 0.000 Intergenic L1PA16|LINE|L1 -37748 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr4-6565 chr4 184802820 184803030 + 11.0 0.000 intron (NM_001995, intron 2 of 20) intron (NM_001995, intron 2 of 20) 2863 NM_001286710 2180 Hs.406678 NM_001995 ENSG00000151726 ACSL1 ACS1|FACL1|FACL2|LACS|LACS1|LACS2 acyl-CoA synthetase long chain family member 1 protein-coding chr22-1067 chr22 20177884 20178094 + 11.0 0.000 Intergenic Intergenic 26929 NR_038460 284865 Hs.638498 NR_038460 ENSG00000249923 LOC284865 - uncharacterized LOC284865 ncRNA chr20-1597 chr20 4907078 4907288 + 11.0 0.000 intron (NM_005116, intron 4 of 16) intron (NM_005116, intron 4 of 16) -83575 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr19-5736 chr19 18167762 18167972 + 11.0 0.000 intron (NR_162071, intron 12 of 14) AluSx1|SINE|Alu -5946 NM_006332 10437 Hs.14623 NM_006332 ENSG00000216490 IFI30 GILT|IFI-30|IP-30|IP30 IFI30 lysosomal thiol reductase protein-coding chr7-2284 chr7 36372214 36372424 + 11.0 0.000 intron (NM_001100425, intron 2 of 6) intron (NM_001100425, intron 2 of 6) -5079 NM_015314 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr7-1376 chr7 126559070 126559280 + 11.0 0.000 intron (NM_001371085, intron 8 of 10) AluSz|SINE|Alu 499009 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr19-4737 chr19 23259782 23259992 + 11.0 0.000 non-coding (NR_103741, exon 5 of 5) non-coding (NR_103741, exon 5 of 5) -9493 NM_001355405 440519 Hs.675814 NM_001355404 ENSG00000196081 ZNF724 ZNF724P zinc finger protein 724 protein-coding chr1-10700 chr1 191363914 191364124 + 11.0 0.000 Intergenic Intergenic -135521 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr13-1744 chr13 109509258 109509468 + 11.0 0.000 Intergenic Intergenic 108667 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr15-947 chr15 25850337 25850547 + 11.0 0.000 intron (NM_024490, intron 1 of 20) intron (NM_024490, intron 1 of 20) -1617 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr9-2698 chr9 82456688 82456898 + 11.0 0.000 Intergenic Intergenic 468021 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr7-5471 chr7 41448172 41448382 + 11.0 0.000 Intergenic Intergenic -245642 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr6-7778 chr6 96998098 96998308 + 11.0 0.000 intron (NM_001286251, intron 3 of 8) intron (NM_001286251, intron 3 of 8) -11873 NR_136579 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr22-4013 chr22 39912224 39912434 + 11.0 0.000 intron (NM_004810, intron 1 of 7) AluJo|SINE|Alu 11245 NM_004810 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chr10-1776 chr10 68827288 68827498 + 11.0 0.000 promoter-TSS (NM_001130160) promoter-TSS (NM_001130160) -138 NM_001130161 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr13-1039 chr13 76456003 76456213 + 11.0 0.000 Intergenic LTR104_Mam|LTR|Gypsy 430297 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr14-3174 chr14 70177756 70177966 + 11.0 0.000 intron (NM_033262, intron 1 of 7) L2c|LINE|L2 -9247 NR_135825 646548 NR_135825 LOC646548 - ADAM metallopeptidase domain 20 pseudogene pseudo chr9-3076 chr9 6007800 6008010 + 11.0 0.000 promoter-TSS (NR_039811) promoter-TSS (NR_039811) 79 NR_039811 100616288 NR_039811 ENSG00000263575 MIR4665 mir-4665 microRNA 4665 ncRNA chr1-6369 chr1 8844534 8844744 + 11.0 0.000 Intergenic Intergenic 21951 NR_106786 102465436 NR_106786 ENSG00000274258 MIR6728 hsa-mir-6728 microRNA 6728 ncRNA chr1-7235 chr1 225360144 225360354 + 11.0 0.000 intron (NM_001367479, intron 74 of 85) L1PA10|LINE|L1 67789 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr20-1546 chr20 57008185 57008395 + 11.0 0.000 Intergenic Intergenic -205406 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr10-2232 chr10 77638081 77638291 + 11.0 0.000 promoter-TSS (NM_001014797) promoter-TSS (NM_001014797) -378 NM_001271522 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr3-5614 chr3 9624636 9624846 + 11.0 0.000 Intergenic Intergenic -24764 NM_022485 64419 Hs.475382 NM_022485 ENSG00000163719 MTMR14 C3orf29 myotubularin related protein 14 protein-coding chr13-1661 chr13 73273826 73274036 + 11.0 0.000 Intergenic Intergenic 214926 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr4-8624 chr4 172962667 172962877 + 11.0 0.000 intron (NM_001034845, intron 10 of 12) intron (NM_001034845, intron 10 of 12) -206039 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr3-2436 chr3 32449824 32450034 + 11.0 0.000 intron (NM_138410, intron 3 of 4) MER117|DNA|hAT-Charlie 52923 NM_017801 54918 Hs.380627 NM_017801 ENSG00000091317 CMTM6 CKLFSF6|PRO2219 CKLF like MARVEL transmembrane domain containing 6 protein-coding chr14-3071 chr14 61857756 61857966 + 11.0 0.000 intron (NM_001367656, intron 1 of 7) intron (NM_001367656, intron 1 of 7) 45158 NM_001367659 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr9-4742 chr9 130273015 130273225 + 11.0 0.000 intron (NM_001291815, intron 1 of 97) L1MC|LINE|L1 7360 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr6-1489 chr6 70668340 70668550 + 11.0 0.000 promoter-TSS (NM_001281440) promoter-TSS (NM_001281440) -85 NM_001281440 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr1-15703 chr1 169108466 169108676 + 11.0 0.000 intron (NM_001677, intron 1 of 5) intron (NM_001677, intron 1 of 5) 1881 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr11-3468 chr11 74069620 74069830 + 11.0 0.000 intron (NM_001286577, intron 24 of 32) intron (NM_001286577, intron 24 of 32) -60488 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr9-8554 chr9 127014329 127014539 + 11.0 0.000 intron (NM_001190729, intron 4 of 17) intron (NM_001190729, intron 4 of 17) 52209 NM_001190728 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr11-4219 chr11 64045548 64045758 + 11.0 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -58237 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr12-2613 chr12 123076595 123076805 + 11.0 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) -4684 NR_038290 100507091 Hs.683912 NR_038290 ENSG00000251497 PITPNM2-AS1 - PITPNM2 antisense RNA 1 ncRNA chr10-4055 chr10 31908050 31908260 + 11.0 0.000 intron (NM_001270696, intron 3 of 17) intron (NM_001270696, intron 3 of 17) 771 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr1-12133 chr1 171345612 171345822 + 11.0 0.000 Intergenic Tigger18a|DNA|TcMar-Tigger 6821 NR_002719 7151 Hs.661092 NR_002719 TOP1P1 - DNA topoisomerase I pseudogene 1 pseudo chr3-3358 chr3 36746662 36746872 + 11.0 0.000 Intergenic Intergenic -6906 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr4-7707 chr4 89220529 89220739 + 11.0 0.000 Intergenic MER34B|LTR|ERV1 87166 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr6-3927 chr6 80425457 80425667 + 11.0 0.000 Intergenic Intergenic 318891 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr5-2933 chr5 139961497 139961707 + 11.0 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 81697 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr6-8391 chr6 150304557 150304767 + 11.0 0.000 Intergenic MamRTE1|LINE|RTE-BovB -64350 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr4-3239 chr4 73330018 73330228 + 11.0 0.000 Intergenic MER21-int|LTR|ERVL -71325 NM_032217 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chr7-3825 chr7 98299472 98299682 + 11.0 0.000 intron (NM_018842, intron 12 of 13) AluJo|SINE|Alu 17891 NM_001159491 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr4-2318 chr4 118395290 118395500 + 11.0 0.000 Intergenic Intergenic -42392 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr16-4474 chr16 56645892 56646102 + 11.0 0.000 Intergenic Intergenic 2193 NR_003658 326343 Hs.679600 NM_175620 MT1DP MTM metallothionein 1D, pseudogene pseudo chr10-2592 chr10 74008613 74008823 + 11.0 0.000 intron (NM_014000, intron 1 of 21) intron (NM_014000, intron 1 of 21) 10602 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr1-7139 chr1 204670522 204670732 + 11.0 0.000 intron (NM_201630, intron 1 of 1) L2c|LINE|L2 15111 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr10-4492 chr10 83114194 83114404 + 11.0 0.000 Intergenic L1PA13|LINE|L1 562790 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr1-3740 chr1 246117279 246117489 + 11.0 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 300028 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-9568 chr1 42214674 42214884 + 11.0 0.000 intron (NM_001198850, intron 5 of 12) L1MEf|LINE|L1 -50034 NM_033553 2980 Hs.778 NM_033553 ENSG00000197273 GUCA2A GCAP-I|GUCA2|STARA guanylate cyclase activator 2A protein-coding chr5-2593 chr5 98713065 98713275 + 11.0 0.000 Intergenic Intergenic -55462 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr5-1503 chr5 134245398 134245608 + 11.0 0.000 Intergenic LTR18B|LTR|ERVL -19430 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr16-4196 chr16 11459845 11460055 + 11.0 0.000 exon (NM_001370704, exon 27 of 67) exon (NM_001370704, exon 27 of 67) -5310 NR_110907 101927131 Hs.569654 NR_110907 ENSG00000262999 LOC101927131 - uncharacterized LOC101927131 ncRNA chr10-6891 chr10 35120304 35120514 + 11.0 0.000 Intergenic Intergenic -6432 NM_001881 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr22-716 chr22 27239261 27239471 + 11.0 0.000 Intergenic Intergenic -14687 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr4-1485 chr4 17846598 17846808 + 11.0 0.000 intron (NM_001365665, intron 4 of 4) intron (NM_001365665, intron 4 of 4) 35724 NR_073124 64151 Hs.567567 NM_022346 ENSG00000109805 NCAPG CAPG|CHCG|NY-MEL-3|YCG1 non-SMC condensin I complex subunit G protein-coding chr3-4873 chr3 170863138 170863348 + 11.0 0.000 Intergenic L2a|LINE|L2 6952 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr2-2724 chr2 99682518 99682728 + 11.0 0.000 intron (NM_001025108, intron 10 of 23) intron (NM_001025108, intron 10 of 23) -192606 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr8-2407 chr8 74321328 74321538 + 11.0 0.000 promoter-TSS (NM_001363050) promoter-TSS (NM_001363050) -72 NM_001363050 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr12-2674 chr12 54258750 54258960 + 11.0 0.000 intron (NM_012117, intron 1 of 4) intron (NM_012117, intron 1 of 4) 690 NM_001127322 23468 Hs.349283 NM_012117 ENSG00000094916 CBX5 HEL25|HP1|HP1A chromobox 5 protein-coding chr5-2437 chr5 127088358 127088568 + 11.0 0.000 Intergenic L3|LINE|CR1 -14971 NM_001164479 401207 Hs.49573 NM_001164478 ENSG00000164241 C5orf63 YDR286C chromosome 5 open reading frame 63 protein-coding chr3-2515 chr3 9956304 9956514 + 11.0 0.000 Intergenic Intergenic -3994 NM_001318871 285368 Hs.598147 NM_207351 ENSG00000163704 PRRT3 - proline rich transmembrane protein 3 protein-coding chr11-4876 chr11 37165070 37165280 + 11.0 0.000 Intergenic Intergenic -566896 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chrX-891 chrX 44180906 44181116 + 11.0 0.000 intron (NM_025184, intron 11 of 14) AluJo|SINE|Alu 162661 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr8-1065 chr8 81842581 81842791 + 11.0 0.000 promoter-TSS (NM_022133) promoter-TSS (NM_022133) -400 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr1-2589 chr1 51417644 51417854 + 11.0 0.000 intron (NM_001159969, intron 1 of 12) intron (NM_001159969, intron 1 of 12) 4346 NM_001159969 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding chr5-8950 chr5 159544299 159544509 + 11.0 0.000 Intergenic Intergenic -78128 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr10-7409 chr10 4074090 4074300 + 11.0 0.000 intron (NR_120632, intron 1 of 3) intron (NR_120632, intron 1 of 3) 22469 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA chr16-2972 chr16 12035722 12035932 + 11.0 0.000 intron (NM_032167, intron 4 of 20) intron (NM_032167, intron 4 of 20) 59093 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr1-6122 chr1 157613383 157613593 + 11.0 0.000 Intergenic L1MA4|LINE|L1 -15403 NM_031282 83417 Hs.120260 NM_031282 ENSG00000163518 FCRL4 CD307d|FCRH4|IGFP2|IRTA1 Fc receptor like 4 protein-coding chr1-6719 chr1 59507118 59507328 + 11.0 0.000 intron (NM_001350794, intron 6 of 14) MER57B2|LTR|ERV1 -8407 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr1-9276 chr1 25552516 25552726 + 11.0 0.000 intron (NM_015627, intron 1 of 8) intron (NM_015627, intron 1 of 8) 9036 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr9-2778 chr9 110919621 110919831 + 11.0 0.000 intron (NM_001351417, intron 5 of 5) intron (NM_001351417, intron 5 of 5) 117054 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr8-3763 chr8 23506590 23506800 + 11.0 0.000 Intergenic Intergenic -22261 NM_001317812 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr3-2987 chr3 88270011 88270221 + 11.0 0.000 Intergenic THE1C|LTR|ERVL-MaLR -68340 NM_001368165 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr1-5182 chr1 171742136 171742346 + 11.0 0.000 promoter-TSS (NR_033704) promoter-TSS (NR_033704) -176 NM_003762 8674 Hs.6651 NM_003762 ENSG00000117533 VAMP4 VAMP-4|VAMP24 vesicle associated membrane protein 4 protein-coding chrX-1796 chrX 85185146 85185356 + 11.0 0.000 intron (NM_001367858, intron 2 of 11) L1M1|LINE|L1 -25455 NR_110651 101928128 Hs.636014 NR_110651 LOC101928128 - uncharacterized LOC101928128 ncRNA chrX-1189 chrX 63747284 63747494 + 11.0 0.000 intron (NM_001369036, intron 1 of 10) intron (NM_001369036, intron 1 of 10) 7734 NM_001369044 23229 Hs.54697 NM_015185 ENSG00000131089 ARHGEF9 COLLYBISTIN|EIEE8|HPEM-2|PEM-2|PEM2 Cdc42 guanine nucleotide exchange factor 9 protein-coding chr2-2308 chr2 96530400 96530610 + 11.0 0.000 intron (NR_135564, intron 1 of 2) intron (NR_135564, intron 1 of 2) 1801 NR_135564 105373496 Hs.570138 NR_135564 ENSG00000235480 LOC105373496 - uncharacterized LOC105373496 ncRNA chr1-11451 chr1 81876790 81877000 + 11.0 0.000 intron (NM_001366002, intron 3 of 20) intron (NM_001366002, intron 3 of 20) 74442 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr15-3514 chr15 99535434 99535644 + 11.0 0.000 Intergenic L1MEc|LINE|L1 -29878 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr1-12872 chr1 108745694 108745904 + 11.0 0.000 promoter-TSS (NM_007269) promoter-TSS (NM_007269) -875 NM_007269 6814 Hs.530436 NM_007269 ENSG00000116266 STXBP3 MUNC18-3|MUNC18C|PSP|UNC-18C syntaxin binding protein 3 protein-coding chr11-2568 chr11 108572177 108572387 + 11.0 0.000 intron (NM_015065, intron 1 of 5) intron (NM_015065, intron 1 of 5) -20053 NM_001144763 23086 Hs.28540 NM_015065 ENSG00000110723 EXPH5 SLAC2-B|SLAC2B exophilin 5 protein-coding chr5-2415 chr5 111948512 111948722 + 11.0 0.000 intron (NR_046678, intron 2 of 3) intron (NR_046678, intron 2 of 3) 28315 NM_001142474 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr2-13561 chr2 154436651 154436861 + 11.0 0.000 non-coding (NR_161181, exon 5 of 5) non-coding (NR_161181, exon 5 of 5) 20682 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr6-8073 chr6 123317045 123317255 + 11.0 0.000 intron (NM_006073, intron 23 of 40) intron (NM_006073, intron 23 of 40) -122454 NR_110844 101927990 Hs.660877 NR_110844 TRDN-AS1 HRAT13 TRDN antisense RNA 1 ncRNA chr5-8148 chr5 101307165 101307375 + 11.0 0.000 Intergenic MIR|SINE|MIR -403988 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr4-4732 chr4 93466509 93466719 + 11.0 0.000 intron (NM_001286838, intron 10 of 14) MER66B|LTR|ERV1 -362139 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr22-1586 chr22 48559328 48559538 + 11.0 0.000 intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) -12046 NR_038917 284933 Hs.159057 NR_038917 ENSG00000281732 LOC284933 - uncharacterized LOC284933 ncRNA chr1-6423 chr1 15685845 15686055 + 11.0 0.000 intron (NM_015164, intron 1 of 19) intron (NM_015164, intron 1 of 19) 1630 NM_015164 23207 Hs.646775 NM_015164 ENSG00000116786 PLEKHM2 SKIP pleckstrin homology and RUN domain containing M2 protein-coding chr5-3167 chr5 72504119 72504329 + 11.0 0.000 intron (NM_152625, intron 1 of 4) intron (NM_152625, intron 1 of 4) 3186 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr4-2822 chr4 41186092 41186302 + 11.0 0.000 intron (NM_173075, intron 1 of 16) UCON77|Unknown|Unknown 28345 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr1-3443 chr1 21862230 21862440 + 11.0 0.000 intron (NM_005529, intron 37 of 96) AluSx|SINE|Alu 50070 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr13-3279 chr13 43722178 43722388 + 11.0 0.000 intron (NM_001347969, intron 1 of 16) intron (NM_001347969, intron 1 of 16) 64689 NM_001347964 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr3-5008 chr3 23807347 23807557 + 11.0 0.000 promoter-TSS (NR_046652) promoter-TSS (NR_046652) -547 NR_046652 100874092 Hs.695913 NR_046652 ENSG00000223791 UBE2E1-AS1 - UBE2E1 antisense RNA 1 ncRNA chr5-3353 chr5 137073216 137073426 + 11.0 0.000 intron (NM_004598, intron 5 of 10) L2b|LINE|L2 -54876 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr5-5158 chr5 108557460 108557670 + 11.0 0.000 Intergenic Intergenic 170696 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr5-4815 chr5 59414483 59414693 + 11.0 0.000 intron (NM_001165899, intron 3 of 16) L2b|LINE|L2 -57618 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr10-2732 chr10 113027783 113027993 + 11.0 0.000 intron (NM_001367943, intron 4 of 14) intron (NM_001367943, intron 4 of 14) -17467 NR_132769 106635520 NR_132769 SNORA87 - small nucleolar RNA, H/ACA box 87 snoRNA chr9-2525 chr9 121234216 121234426 + 11.0 0.000 intron (NM_001353053, intron 6 of 25) MLT1J|LTR|ERVL-MaLR -32452 NM_016322 51552 Hs.371563 NM_016322 ENSG00000119396 RAB14 FBP|RAB-14 RAB14, member RAS oncogene family protein-coding chr8-1706 chr8 118343971 118344181 + 11.0 0.000 intron (NM_001363274, intron 4 of 4) intron (NM_001363274, intron 4 of 4) -232257 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr5-1828 chr5 95780982 95781192 + 11.0 0.000 intron (NM_014899, intron 9 of 11) intron (NM_014899, intron 9 of 11) 41639 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr7-2120 chr7 27834002 27834212 + 11.0 0.000 intron (NM_175061, intron 4 of 4) intron (NM_175061, intron 4 of 4) 94012 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr11-1775 chr11 60951947 60952157 + 11.0 0.000 non-coding (NR_027391, exon 1 of 7) non-coding (NR_027391, exon 1 of 7) 124 NR_027391 51296 Hs.237856 NM_016582 ENSG00000110446 SLC15A3 OCTP|PHT2|PTR3 solute carrier family 15 member 3 protein-coding chr1-4460 chr1 6553952 6554162 + 11.0 0.000 intron (NM_024654, intron 1 of 11) intron (NM_024654, intron 1 of 11) 456 NM_024654 79707 Hs.59425 NM_024654 ENSG00000162408 NOL9 Grc3|NET6 nucleolar protein 9 protein-coding chr7-5537 chr7 45293303 45293513 + 11.0 0.000 Intergenic Intergenic 135617 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr2-6072 chr2 156756592 156756802 + 11.0 0.000 Intergenic Intergenic 320318 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr5-928 chr5 500520 500730 + 11.0 0.000 intron (NM_001284351, intron 1 of 16) intron (NM_001284351, intron 1 of 16) 23824 NM_004174 6550 Hs.658120 NM_004174 ENSG00000066230 SLC9A3 DIAR8|NHE-3|NHE3 solute carrier family 9 member A3 protein-coding chr18-1217 chr18 37551090 37551300 + 11.0 0.000 intron (NM_001353701, intron 1 of 1) intron (NM_001353701, intron 1 of 1) 14603 NM_001353752 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr6-3527 chr6 37131628 37131838 + 11.0 0.000 Intergenic Intergenic -38419 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr8-5530 chr8 67390935 67391145 + 11.0 0.000 intron (NR_136224, intron 1 of 4) AluJo|SINE|Alu 47206 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr17-3503 chr17 50845296 50845506 + 11.0 0.000 Intergenic L2b|LINE|L2 9815 NM_175575 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr14-3251 chr14 77044532 77044742 + 11.0 0.000 intron (NR_110554, intron 1 of 3) MER124|DNA?|DNA? 3588 NR_110554 283575 Hs.651736 NR_110554 ENSG00000246548 LINC02288 - long intergenic non-protein coding RNA 2288 ncRNA chr5-1190 chr5 65886014 65886224 + 11.0 0.000 Intergenic MIRb|SINE|MIR -40435 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr9-2258 chr9 93118730 93118940 + 11.0 0.000 Intergenic Intergenic 15416 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr4-3208 chr4 31754770 31754980 + 11.0 0.000 Intergenic Intergenic -242504 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA chr2-3620 chr2 110913834 110914044 + 11.0 0.000 intron (NM_001371254, intron 11 of 18) MSTB|LTR|ERVL-MaLR 181366 NM_001371254 chr1-3038 chr1 2360873 2361083 + 11.0 0.000 intron (NM_001301060, intron 8 of 10) L1MEc|LINE|L1 -8317 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr7-1940 chr7 55074182 55074392 + 11.0 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -35552 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr13-841 chr13 77918829 77919039 + 11.0 0.000 promoter-TSS (NM_001122659) promoter-TSS (NM_001122659) -103 NM_003991 1910 Hs.82002 NM_000115 ENSG00000136160 EDNRB ABCDS|ET-B|ET-BR|ETB|ETB1|ETBR|ETRB|HSCR|HSCR2|WS4A endothelin receptor type B protein-coding chr14-1506 chr14 51581110 51581320 + 11.0 0.000 intron (NM_001042481, intron 2 of 14) intron (NM_001042481, intron 2 of 14) 18737 NR_047477 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr11-6882 chr11 102798203 102798413 + 11.0 0.000 promoter-TSS (NM_002421) promoter-TSS (NM_002421) -148 NM_002421 4312 Hs.83169 NM_002421 ENSG00000196611 MMP1 CLG|CLGN matrix metallopeptidase 1 protein-coding chr4-1593 chr4 24519636 24519846 + 11.0 0.000 TTS (NR_030299) TTS (NR_030299) 549 NR_030299 693158 NR_030299 ENSG00000207697 MIR573 MIRN573|hsa-mir-573|mir-573 microRNA 573 ncRNA chr5-3666 chr5 160077827 160078037 + 11.0 0.000 non-coding (NR_146217, exon 6 of 6) non-coding (NR_146217, exon 6 of 6) 41518 NR_146217 114825 Hs.744960 NM_052927 ENSG00000170234 PWWP2A MST101 PWWP domain containing 2A protein-coding chr12-5255 chr12 109549754 109549964 + 11.0 0.000 Intergenic L1ME4a|LINE|L1 23645 NR_038118 326625 Hs.12106 NM_052845 ENSG00000139428 MMAB ATR|CFAP23|cblB|cob metabolism of cobalamin associated B protein-coding chrX-2118 chrX 27468621 27468831 + 11.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -5385 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr18-3087 chr18 34016715 34016925 + 11.0 0.000 intron (NM_001353232, intron 6 of 9) L2c|LINE|L2 31792 NM_001353236 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr4-3288 chr4 140717545 140717755 + 11.0 0.000 intron (NM_015130, intron 1 of 20) intron (NM_015130, intron 1 of 20) 38735 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr11-2226 chr11 66080531 66080741 + 11.0 0.000 intron (NM_018026, intron 1 of 23) MIRb|SINE|MIR 10364 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr13-1781 chr13 114229792 114230002 + 11.0 0.000 Intergenic LTR24B|LTR|ERV1 -4948 NM_003903 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chr15-1730 chr15 39852204 39852414 + 11.0 0.000 intron (NM_001271854, intron 1 of 3) MER117|DNA|hAT-Charlie -23033 NM_001271855 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr8-2566 chr8 39028400 39028610 + 11.0 0.000 intron (NR_027638, intron 11 of 20) intron (NR_027638, intron 11 of 20) -9820 NR_145988 109616979 NR_145736 ENSG00000207199 SNORD38D - small nucleolar RNA, C/D box 38D snoRNA chr8-2017 chr8 101831760 101831970 + 11.0 0.000 intron (NM_001040628, intron 4 of 7) intron (NM_001040628, intron 4 of 7) -40896 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr11-3262 chr11 74687683 74687893 + 11.0 0.000 Intergenic L2b|LINE|L2 23579 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr2-6014 chr2 88836591 88836801 + 11.0 0.000 Intergenic Intergenic 24326 NR_039635 100616399 NR_039635 ENSG00000265510 MIR4436A mir-4436a microRNA 4436a ncRNA chr11-2910 chr11 64675477 64675687 + 11.0 0.000 intron (NM_138732, intron 6 of 19) intron (NM_138732, intron 6 of 19) -32037 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr7-7386 chr7 68197296 68197506 + 11.0 0.000 Intergenic L2c|LINE|L2 177148 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr17-2914 chr17 44246258 44246468 + 11.0 0.000 Intergenic AluSq|SINE|Alu 21772 NM_000342 6521 Hs.210751 NM_000342 ENSG00000004939 SLC4A1 AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR solute carrier family 4 member 1 (Diego blood group) protein-coding chr3-4094 chr3 104963830 104964040 + 11.0 0.000 Intergenic Intergenic -402778 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr13-3978 chr13 64029912 64030122 + 11.0 0.000 intron (NR_145420, intron 2 of 5) LTR1A2|LTR|ERV1 45994 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr10-7214 chr10 115746856 115747066 + 11.0 0.000 intron (NM_207303, intron 27 of 28) intron (NM_207303, intron 27 of 28) 447828 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr4-1905 chr4 30724715 30724925 + 11.0 0.000 3' UTR (NM_032456, exon 1 of 1) 3' UTR (NM_032456, exon 1 of 1) 4451 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr11-4541 chr11 120110566 120110776 + 11.0 0.000 TTS (NM_012101) TTS (NM_012101) 18182 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr1-4120 chr1 245801183 245801393 + 11.0 0.000 intron (NM_022743, intron 10 of 11) intron (NM_022743, intron 10 of 11) -566771 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chrX-802 chrX 66164135 66164345 + 11.0 0.000 promoter-TSS (NM_001367236) promoter-TSS (NM_001367236) -7 NM_014799 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr7-6771 chr7 17782064 17782274 + 11.0 0.000 Intergenic MER21C|LTR|ERVL 158325 NR_146933 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding chr18-655 chr18 45777504 45777714 + 11.0 0.000 Intergenic Intergenic -48066 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr15-1044 chr15 40257782 40257992 + 11.0 0.000 intron (NM_001128629, intron 2 of 9) intron (NM_001128629, intron 2 of 9) 4709 NM_001276717 56924 Hs.732375 NM_020168 ENSG00000137843 PAK6 PAK5 p21 (RAC1) activated kinase 6 protein-coding chr11-5167 chr11 3840442 3840652 + 11.0 0.000 intron (NM_001665, intron 1 of 1) intron (NM_001665, intron 1 of 1) 412 NM_001665 391 Hs.501728 NM_001665 ENSG00000177105 RHOG ARHG ras homolog family member G protein-coding chr6-3806 chr6 28264085 28264295 + 11.0 0.000 Intergenic Intergenic -2820 NM_001023560 7741 Hs.157883 NM_007151 ENSG00000197062 ZSCAN26 SRE-ZBP|SREZBP|ZNF187 zinc finger and SCAN domain containing 26 protein-coding chr3-5541 chr3 2395299 2395509 + 11.0 0.000 intron (NM_175607, intron 3 of 24) L1ME2z|LINE|L1 156575 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chrX-3102 chrX 147847630 147847840 + 11.0 0.000 Intergenic Intergenic 64082 NR_024499 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr5-3645 chr5 143323092 143323302 + 11.0 0.000 intron (NR_157096, intron 1 of 7) MER44B|DNA|TcMar-Tigger 80086 NM_001364185 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr1-7371 chr1 22067568 22067778 + 11.0 0.000 intron (NM_044472, intron 1 of 5) MLT1A0|LTR|ERVL-MaLR 14964 NM_044472 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr8-5329 chr8 3812583 3812793 + 11.0 0.000 intron (NM_033225, intron 5 of 69) intron (NM_033225, intron 5 of 69) -1084237 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr5-3524 chr5 7385897 7386107 + 11.0 0.000 Intergenic LTR81A|LTR|Gypsy -10136 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chr1-2486 chr1 154607389 154607599 + 11.0 0.000 intron (NM_001365045, intron 1 of 14) intron (NM_001365045, intron 1 of 14) 692 NM_015840 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr1-7042 chr1 177786252 177786462 + 11.0 0.000 Intergenic L2b|LINE|L2 85833 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr11-2742 chr11 33869624 33869834 + 11.0 0.000 5' UTR (NM_005574, exon 3 of 6) 5' UTR (NM_005574, exon 3 of 6) 149 NM_001142316 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr2-6572 chr2 223895750 223895960 + 11.0 0.000 intron (NM_020830, intron 6 of 11) intron (NM_020830, intron 6 of 11) 49480 NM_020830 57590 Hs.368359 NM_020830 ENSG00000085449 WDFY1 FENS-1|FENS1|WDF1|ZFYVE17 WD repeat and FYVE domain containing 1 protein-coding chr7-3865 chr7 104233728 104233938 + 11.0 0.000 Intergenic L1ME1|LINE|L1 -25786 NM_181747 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chr10-7400 chr10 3654845 3655055 + 11.0 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 130259 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr10-4022 chr10 9228800 9229010 + 11.0 0.000 intron (NR_120635, intron 4 of 4) intron (NR_120635, intron 4 of 4) -46708 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr3-3595 chr3 68124338 68124548 + 11.0 0.000 intron (NM_001252216, intron 2 of 4) Charlie4z|DNA|hAT-Charlie 120196 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr1-2096 chr1 112360330 112360540 + 11.0 0.000 Intergenic Intergenic -35779 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr11-2707 chr11 121319392 121319602 + 11.0 0.000 Intergenic Intergenic 26629 NM_001024956 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr17-2749 chr17 79519469 79519679 + 11.0 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) -3426 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr6-2446 chr6 4981480 4981690 + 11.0 0.000 Intergenic Intergenic -22231 NR_126015 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr3-3067 chr3 129229230 129229440 + 11.0 0.000 Intergenic Intergenic -20271 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding chr1-2024 chr1 155011592 155011802 + 11.0 0.000 intron (NM_001252406, intron 3 of 4) intron (NM_001252406, intron 3 of 4) 9067 NR_046206 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr3-3258 chr3 55075016 55075226 + 11.0 0.000 TTS (NM_018398) TTS (NM_018398) -103051 NR_147142 105377096 Hs.640507 NR_147142 ENSG00000243572 LINC02017 - long intergenic non-protein coding RNA 2017 ncRNA chr9-4909 chr9 8646709 8646919 + 11.0 0.000 intron (NM_130392, intron 1 of 30) intron (NM_130392, intron 1 of 30) 87132 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr19-2407 chr19 18226074 18226284 + 11.0 0.000 intron (NM_001330172, intron 2 of 15) CpG 259 NM_001369701 5143 Hs.132584 NM_000923 ENSG00000105650 PDE4C DPDE1|PDE21 phosphodiesterase 4C protein-coding chr16-4233 chr16 19151380 19151590 + 11.0 0.000 Intergenic Intergenic -16349 NM_001330509 51760 Hs.258326 NM_016524 ENSG00000103528 SYT17 sytXVII synaptotagmin 17 protein-coding chr3-3157 chr3 170727264 170727474 + 11.0 0.000 intron (NR_135556, intron 4 of 5) L2-3_Crp|LINE|L2 -141294 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr19-1400 chr19 35879805 35880015 + 11.0 0.000 TTS (NM_005166) TTS (NM_005166) 11465 NM_005166 333 Hs.74565 NM_005166 ENSG00000105290 APLP1 APLP amyloid beta precursor like protein 1 protein-coding chr14-2403 chr14 56207982 56208192 + 11.0 0.000 intron (NM_021255, intron 2 of 5) intron (NM_021255, intron 2 of 5) 89676 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr17-2271 chr17 21467318 21467528 + 11.0 0.000 Intergenic Intergenic 84255 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr20-629 chr20 41316972 41317182 + 11.0 0.000 Intergenic CpG -16957 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr3-5863 chr3 34281025 34281235 + 11.0 0.000 Intergenic L1MA10|LINE|L1 482500 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr10-5048 chr10 36873347 36873557 + 11.0 0.000 Intergenic Intergenic -252405 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr2-7213 chr2 218120922 218121132 + 11.0 0.000 Intergenic HERV9-int|LTR|ERV1 -4267 NM_001168298 3579 Hs.846 NM_001557 ENSG00000180871 CXCR2 CD182|CDw128b|CMKAR2|IL8R2|IL8RA|IL8RB C-X-C motif chemokine receptor 2 protein-coding chr10-1232 chr10 71234999 71235209 + 11.0 0.000 intron (NM_001244889, intron 1 of 15) (CTGCCT)n|Simple_repeat|Simple_repeat -16876 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chrX-3995 chrX 15474094 15474304 + 11.0 0.000 intron (NM_001018109, intron 3 of 9) MER57A1|LTR|ERV1 17110 NR_037859 100532742 Hs.495728 NR_037859 PIR-FIGF - PIR-FIGF readthrough ncRNA chr12-2540 chr12 102378659 102378869 + 11.0 0.000 Intergenic Intergenic 99786 NM_001111284 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr9-3655 chr9 95065840 95066050 + 11.0 0.000 TTS (NR_106729) TTS (NR_106729) 595 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr1-4627 chr1 162626386 162626596 + 11.0 0.000 Intergenic Plat_L3|LINE|CR1 -4372 NM_001354983 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr1-5005 chr1 65359770 65359980 + 11.0 0.000 intron (NM_001256865, intron 2 of 19) MER58B|DNA|hAT-Charlie 50332 NM_001256864 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr6-3008 chr6 44581560 44581770 + 11.0 0.000 Intergenic Intergenic -29784 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr6-2799 chr6 149482186 149482396 + 11.0 0.000 intron (NM_207360, intron 1 of 5) intron (NM_207360, intron 1 of 5) 2723 NM_207360 340152 Hs.632618 NM_207360 ENSG00000178199 ZC3H12D C6orf95|MCPIP4|TFL|dJ281H8.1|p34 zinc finger CCCH-type containing 12D protein-coding chr10-4357 chr10 32960054 32960264 + 11.0 0.000 Intergenic Intergenic -1929 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr22-1625 chr22 31758785 31758995 + 11.0 0.000 intron (NR_146296, intron 3 of 42) intron (NR_146296, intron 3 of 42) 4867 NM_001369901 9681 Hs.435022 NM_014662 ENSG00000100150 DEPDC5 DEP.5|FFEVF|FFEVF1 DEP domain containing 5 protein-coding chr9-3840 chr9 130410844 130411054 + 11.0 0.000 intron (NM_001291815, intron 85 of 97) intron (NM_001291815, intron 85 of 97) -33758 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr2-4331 chr2 238424584 238424794 + 11.0 0.000 Intergenic Intergenic -2238 NM_001040445 51665 Hs.516788 NM_016114 ENSG00000065802 ASB1 ASB-1 ankyrin repeat and SOCS box containing 1 protein-coding chr4-2576 chr4 96826449 96826659 + 11.0 0.000 Intergenic Intergenic 515851 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr5-4769 chr5 54361694 54361904 + 11.0 0.000 intron (NR_126379, intron 1 of 4) intron (NR_126379, intron 1 of 4) 40855 NR_126379 104355136 Hs.559024 NR_126379 ENSG00000249069 LINC01033 - long intergenic non-protein coding RNA 1033 ncRNA chr6-2864 chr6 4186021 4186231 + 11.0 0.000 TTS (NR_125874) TTS (NR_125874) 3903 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr8-3329 chr8 34044595 34044805 + 11.0 0.000 Intergenic MIRb|SINE|MIR -444594 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr19-3334 chr19 7287865 7288075 + 11.0 0.000 intron (NM_001079817, intron 1 of 20) MER58A|DNA|hAT-Charlie 6444 NM_000208 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr22-1511 chr22 44743632 44743842 + 11.0 0.000 intron (NM_181334, intron 4 of 14) MIR3|SINE|MIR -8821 NM_001017526 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr16-3954 chr16 87406438 87406648 + 11.0 0.000 3' UTR (NM_015144, exon 13 of 13) 3' UTR (NM_015144, exon 13 of 13) 14207 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr19-2369 chr19 2369487 2369697 + 11.0 0.000 Intergenic AluJo|SINE|Alu -20179 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr1-7152 chr1 205428042 205428252 + 11.0 0.000 Intergenic Intergenic -6091 NM_001199051 93273 Hs.655520 NM_001001552 ENSG00000186007 LEMD1 CT50|LEMP-1 LEM domain containing 1 protein-coding chr11-7663 chr11 65102301 65102511 + 11.0 0.000 intron (NR_073519, intron 2 of 9) intron (NR_073519, intron 2 of 9) 6192 NR_073519 738 Hs.277517 NM_013265 ENSG00000149823 VPS51 ANG2|ANG3|C11orf2|C11orf3|FFR VPS51 subunit of GARP complex protein-coding chr12-2101 chr12 51852779 51852989 + 11.0 0.000 TTS (NR_135803) TTS (NR_135803) 4661 NR_135803 105369971 Hs.505582 NR_135803 ENSG00000259887 LOC105369971 - uncharacterized LOC105369971 ncRNA chr3-7327 chr3 40592036 40592246 + 11.0 0.000 Intergenic Intergenic 67181 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr2-9118 chr2 207073260 207073470 + 11.0 0.000 TTS (NM_003709) TTS (NM_003709) 36708 NR_036227 100423036 NR_036227 ENSG00000253008 MIR2355 mir-2355 microRNA 2355 ncRNA chr19-1403 chr19 40377062 40377272 + 11.0 0.000 intron (NM_001031696, intron 11 of 12) intron (NM_001031696, intron 11 of 12) 7321 NR_106854 102465477 NR_106854 ENSG00000275652 MIR6796 hsa-mir-6796 microRNA 6796 ncRNA chr19-3818 chr19 9621819 9622029 + 11.0 0.000 promoter-TSS (NM_152289) promoter-TSS (NM_152289) 442 NR_122038 284385 Hs.651747 NM_001242812 ENSG00000267106 ZNF561-AS1 C19orf82 ZNF561 antisense RNA 1 (head to head) ncRNA chr15-1790 chr15 80243269 80243479 + 11.0 0.000 intron (NM_001352888, intron 1 of 2) intron (NM_001352888, intron 1 of 2) 8839 NM_001352888 100996492 Hs.20034 NM_001352888 ENSG00000259417 CTXND1 LINC01314 cortexin domain containing 1 protein-coding chr1-9619 chr1 46021743 46021953 + 11.0 0.000 intron (NM_001324320, intron 12 of 29) intron (NM_001324320, intron 12 of 29) 108825 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr20-2367 chr20 16748466 16748676 + 11.0 0.000 intron (NM_020157, intron 1 of 3) intron (NM_020157, intron 1 of 3) 218 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr18-1566 chr18 31791363 31791573 + 11.0 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -30588 NM_001034172 147407 Hs.567708 NM_001034172 ENSG00000141437 SLC25A52 MCART2 solute carrier family 25 member 52 protein-coding chr4-7419 chr4 65838690 65838900 + 11.0 0.000 Intergenic MER21B|LTR|ERVL -168300 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chrX-889 chrX 40827560 40827770 + 11.0 0.000 Intergenic HERVL40-int|LTR|ERVL 5531 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo chr7-3391 chr7 126215549 126215759 + 11.0 0.000 Intergenic Intergenic 842530 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr4-5342 chr4 183807170 183807380 + 11.0 0.000 intron (NR_132761, intron 1 of 2) intron (NR_132761, intron 1 of 2) 9253 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr5-3246 chr5 97231104 97231314 + 11.0 0.000 Intergenic Intergenic -47962 NM_018343 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding chr18-1305 chr18 68455088 68455298 + 11.0 0.000 Intergenic L1M3de|LINE|L1 259915 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr7-7913 chr7 7326336 7326546 + 11.0 0.000 Intergenic Intergenic 71287 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr3-3776 chr3 12681669 12681879 + 11.0 0.000 Intergenic L2c|LINE|L2 -17573 NM_002880 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr13-1336 chr13 33213450 33213660 + 11.0 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -7505 NM_001243474 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr2-6337 chr2 78677189 78677399 + 11.0 0.000 Intergenic MER61-int|LTR|ERV1 131763 NR_136312 105374820 Hs.570225 NR_136311 LOC105374820 - uncharacterized LOC105374820 ncRNA chr5-2904 chr5 126138761 126138971 + 11.0 0.000 Intergenic Intergenic -40711 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr3-2849 chr3 31010054 31010264 + 11.0 0.000 Intergenic Intergenic -115498 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr5-2138 chr5 82328092 82328302 + 11.0 0.000 Intergenic ERVL-E-int|LTR|ERVL 48735 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr4-2913 chr4 87032069 87032279 + 11.0 0.000 intron (NM_001313960, intron 1 of 17) intron (NM_001313960, intron 1 of 17) 25173 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr3-1431 chr3 11392422 11392632 + 11.0 0.000 intron (NM_001144912, intron 16 of 16) intron (NM_001144912, intron 16 of 16) 120130 NM_001349232 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr1-10843 chr1 204341589 204341799 + 11.0 0.000 intron (NM_014935, intron 1 of 22) Plat_L3|LINE|CR1 18235 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chrX-3401 chrX 6246578 6246788 + 11.0 0.000 Intergenic Intergenic -17816 NM_001282145 57502 Hs.21107 NM_020742 ENSG00000146938 NLGN4X ASPGX2|AUTSX2|HLNX|HNL4X|NLGN4 neuroligin 4 X-linked protein-coding chr19-1871 chr19 18969701 18969911 + 11.0 0.000 Intergenic MER44B|DNA|TcMar-Tigger -28589 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr15-3446 chr15 91704624 91704834 + 11.0 0.000 Intergenic Intergenic -148979 NM_013272 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr5-7581 chr5 41763075 41763285 + 11.0 0.000 intron (NR_157114, intron 12 of 15) intron (NR_157114, intron 12 of 15) 80477 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr8-4497 chr8 119427169 119427379 + 11.0 0.000 Intergenic Intergenic 10828 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr22-1255 chr22 23251802 23252012 + 11.0 0.000 intron (NM_004327, intron 1 of 22) intron (NM_004327, intron 1 of 22) -10860 NR_033408 26226 Hs.729589 NR_033408 ENSG00000230701 FBXW4P1 FBW3|FBXW3|SHFM3P1 F-box and WD repeat domain containing 4 pseudogene 1 pseudo chr12-4885 chr12 64347713 64347923 + 11.0 0.000 intron (NM_001099676, intron 2 of 10) MER61-int|LTR|ERV1 42940 NM_001170633 115749 Hs.535190 NM_001099676 ENSG00000185306 C12orf56 - chromosome 12 open reading frame 56 protein-coding chr18-673 chr18 57813320 57813530 + 11.0 0.000 Intergenic Intergenic -10110 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr18-965 chr18 52596655 52596865 + 11.0 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 256563 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr19-3074 chr19 4202584 4202794 + 11.0 0.000 intron (NM_133475, intron 6 of 21) intron (NM_133475, intron 6 of 21) 19335 NM_133475 170961 Hs.197872 NM_133475 ENSG00000089847 ANKRD24 - ankyrin repeat domain 24 protein-coding chr6-767 chr6 1609811 1610021 + 11.0 0.000 promoter-TSS (NM_001453) promoter-TSS (NM_001453) 1 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chrX-447 chrX 103442514 103442724 + 11.0 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 65581 NM_014380 27018 Hs.448588 NM_014380 ENSG00000166681 BEX3 Bex|DXS6984E|HGR74|NADE|NGFRAP1 brain expressed X-linked 3 protein-coding chr8-3534 chr8 120324367 120324577 + 11.0 0.000 intron (NM_021110, intron 40 of 47) MamRTE1|LINE|RTE-BovB 120678 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr16-2404 chr16 70470771 70470981 + 11.0 0.000 intron (NM_145059, intron 11 of 23) intron (NM_145059, intron 11 of 23) 16281 NM_145059 197258 Hs.7907 NM_145059 ENSG00000157353 FCSK 1110046B12Rik|CDGF2|FUK fucose kinase protein-coding chr16-2301 chr16 12417115 12417325 + 11.0 0.000 intron (NM_032167, intron 18 of 20) intron (NM_032167, intron 18 of 20) -303101 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr11-5858 chr11 9753141 9753351 + 11.0 0.000 TTS (NM_001297714) TTS (NM_001297714) -5047 NR_036485 283104 Hs.632156 NR_036485 ENSG00000246273 SBF2-AS1 - SBF2 antisense RNA 1 ncRNA chr1-2659 chr1 179629911 179630121 + 11.0 0.000 intron (NM_001199091, intron 6 of 16) AluY|SINE|Alu 23789 NM_001199092 163589 Hs.197354 NM_173533 ENSG00000162782 TDRD5 TUDOR3 tudor domain containing 5 protein-coding chr3-7345 chr3 48945516 48945726 + 11.0 0.000 intron (NM_001349220, intron 5 of 17) intron (NM_001349220, intron 5 of 17) -26236 NR_161301 646450 Hs.720727 NM_001123040 ENSG00000221883 ARIH2OS C3orf71 ariadne RBR E3 ubiquitin protein ligase 2 opposite strand ncRNA chrX-1863 chrX 117060427 117060637 + 11.0 0.000 Intergenic Intergenic -242672 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr1-16346 chr1 218763527 218763737 + 11.0 0.000 intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 154879 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chr14-3027 chr14 56212557 56212767 + 11.0 0.000 intron (NM_021255, intron 2 of 5) LSU-rRNA_Hsa|rRNA|rRNA 94251 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr3-3107 chr3 143363169 143363379 + 11.0 0.000 intron (NM_173653, intron 14 of 15) intron (NM_173653, intron 14 of 15) 21028 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr13-948 chr13 99307940 99308150 + 11.0 0.000 promoter-TSS (NM_004951) promoter-TSS (NM_004951) -646 NM_004951 1880 Hs.784 NM_004951 ENSG00000169508 GPR183 EBI2|hEBI2 G protein-coupled receptor 183 protein-coding chr17-2341 chr17 61450591 61450801 + 11.0 0.000 Intergenic Intergenic -1726 NM_001321120 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr9-5208 chr9 73565828 73566038 + 11.0 0.000 Intergenic L3|LINE|CR1 414068 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr3-3743 chr3 196788680 196788890 + 11.0 0.000 intron (NM_002577, intron 2 of 14) L2b|LINE|L2 48928 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr22-1507 chr22 42604508 42604718 + 11.0 0.000 intron (NR_103820, intron 1 of 8) intron (NR_103820, intron 1 of 8) 10270 NR_103820 84271 Hs.505802 NM_032311 ENSG00000100227 POLDIP3 PDIP3|PDIP46|SKAR DNA polymerase delta interacting protein 3 protein-coding chr6-3728 chr6 3713063 3713273 + 11.0 0.000 Intergenic Intergenic 38844 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr14-2099 chr14 73211231 73211441 + 11.0 0.000 intron (NM_000021, intron 9 of 11) MLT1L|LTR|ERVL-MaLR -26170 NR_158677 89932 Hs.509909 NM_173462 ENSG00000100767 PAPLN PPN papilin, proteoglycan like sulfated glycoprotein protein-coding chr10-3577 chr10 82288645 82288855 + 11.0 0.000 intron (NM_001370082, intron 3 of 10) intron (NM_001370082, intron 3 of 10) -55830 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr5-1270 chr5 123036145 123036355 + 11.0 0.000 intron (NM_000943, intron 1 of 4) CpG 475 NM_000943 5480 Hs.110364 NM_000943 ENSG00000168938 PPIC CYPC peptidylprolyl isomerase C protein-coding chr1-3790 chr1 9997767 9997977 + 11.0 0.000 intron (NM_052960, intron 1 of 3) CpG 644 NM_052960 116362 Hs.422688 NM_052960 ENSG00000162444 RBP7 CRABP4|CRBP4|CRBPIV retinol binding protein 7 protein-coding chr10-4884 chr10 18195747 18195957 + 11.0 0.000 intron (NM_201593, intron 2 of 13) intron (NM_201593, intron 2 of 13) 55428 NM_201572 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr10-3622 chr10 95268335 95268545 + 11.0 0.000 intron (NM_020992, intron 3 of 6) intron (NM_020992, intron 3 of 6) 22563 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr17-2231 chr17 3603471 3603681 + 11.0 0.000 intron (NM_080704, intron 2 of 16) MIRc|SINE|MIR 5835 NM_080704 7442 Hs.579217 NM_018727 ENSG00000196689 TRPV1 VR1 transient receptor potential cation channel subfamily V member 1 protein-coding chr12-4896 chr12 65556898 65557108 + 11.0 0.000 TTS (NR_120434) TTS (NR_120434) 308 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr1-6634 chr1 43997937 43998147 + 11.0 0.000 intron (NR_048548, intron 11 of 12) intron (NR_048548, intron 11 of 12) 6195 NM_001349129 149473 Hs.632394 NM_152499 ENSG00000159214 CCDC24 - coiled-coil domain containing 24 protein-coding chr2-2310 chr2 96907466 96907676 + 11.0 0.000 intron (NM_001122646, intron 12 of 16) intron (NM_001122646, intron 12 of 16) -9438 NM_016490 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr11-3619 chr11 71962458 71962668 + 11.0 0.000 intron (NR_024148, intron 3 of 8) intron (NR_024148, intron 3 of 8) 33517 NM_018320 55298 Hs.368554 NM_018320 ENSG00000137522 RNF121 - ring finger protein 121 protein-coding chr22-2479 chr22 21040090 21040300 + 11.0 0.000 Intergenic MER34-int|LTR|ERV1 4054 NR_002829 440799 Hs.640665 NR_002829 P2RX6P - purinergic receptor P2X 6 pseudogene pseudo chr10-4109 chr10 69187973 69188183 + 11.0 0.000 intron (NM_001323586, intron 5 of 15) intron (NM_001323586, intron 5 of 15) 7844 NM_003171 6832 Hs.106469 NM_003171 ENSG00000156502 SUPV3L1 SUV3 Suv3 like RNA helicase protein-coding chrX-1296 chrX 118725072 118725282 + 11.0 0.000 Intergenic Intergenic -2429 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr4-2871 chr4 75180923 75181133 + 11.0 0.000 Intergenic L1PB1|LINE|L1 -96320 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA chr9-5441 chr9 97505668 97505878 + 11.0 0.000 intron (NM_003275, intron 1 of 9) L2c|LINE|L2 4107 NM_003275 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr5-5602 chr5 151312288 151312498 + 11.0 0.000 Intergenic L1M1|LINE|L1 -8627 NM_181774 285641 Hs.720893 NM_181774 ENSG00000186334 SLC36A3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 member 3 protein-coding chr5-3455 chr5 160975303 160975513 + 11.0 0.000 Intergenic Intergenic -36782 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr3-5263 chr3 111376731 111376941 + 11.0 0.000 Intergenic L1PB1|LINE|L1 -165361 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr3-10824 chr3 163552249 163552459 + 11.0 0.000 Intergenic LTR12C|LTR|ERV1 -249053 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr12-5074 chr12 93102411 93102621 + 11.0 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -71850 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr16-1477 chr16 1006560 1006770 + 11.0 0.000 Intergenic Intergenic 24895 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr4-8325 chr4 145414170 145414380 + 11.0 0.000 Intergenic L2b|LINE|L2 -67031 NM_001354812 4086 Hs.604588 NM_005900 ENSG00000170365 SMAD1 BSP-1|BSP1|JV4-1|JV41|MADH1|MADR1 SMAD family member 1 protein-coding chr1-9557 chr1 41238374 41238584 + 11.0 0.000 intron (NM_001172218, intron 1 of 15) L2c|LINE|L2 3827 NM_012236 22955 Hs.571874 NM_012236 ENSG00000010803 SCMH1 Scml3 Scm polycomb group protein homolog 1 protein-coding chr16-3792 chr16 31524966 31525176 + 11.0 0.000 Intergenic Intergenic -2829 NM_016633 51327 Hs.274309 NM_016633 ENSG00000169877 AHSP EDRF|ERAF alpha hemoglobin stabilizing protein protein-coding chr22-3875 chr22 34468629 34468839 + 11.0 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 529182 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr3-2740 chr3 131540161 131540371 + 11.0 0.000 intron (NM_130808, intron 15 of 15) intron (NM_130808, intron 15 of 15) -37295 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr17-3487 chr17 47819944 47820154 + 11.0 0.000 exon (NM_145798, exon 3 of 23) exon (NM_145798, exon 3 of 23) 1745 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding chr3-3470 chr3 176590789 176590999 + 11.0 0.000 Intergenic MIRb|SINE|MIR 44638 NR_109968 100505547 Hs.253350 NR_109968 LINC01208 - long intergenic non-protein coding RNA 1208 ncRNA chr18-3404 chr18 61933089 61933299 + 11.0 0.000 Intergenic Intergenic -40187 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr17-7451 chr17 13105643 13105853 + 11.0 0.000 Intergenic AluSx|SINE|Alu -87684 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr7-7020 chr7 130120557 130120767 + 11.0 0.000 intron (NM_014997, intron 3 of 9) intron (NM_014997, intron 3 of 9) -21069 NR_149034 100128325 Hs.105944 NR_149033 ENSG00000229196 LOC100128325 - uncharacterized LOC100128325 ncRNA chr13-2367 chr13 39148197 39148407 + 11.0 0.000 Intergenic L1PA17|LINE|L1 109846 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr15-4699 chr15 66596101 66596311 + 11.0 0.000 intron (NR_110372, intron 1 of 4) Tigger2b_Pri|DNA|TcMar-Tigger 14016 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr3-3267 chr3 64484361 64484571 + 11.0 0.000 Intergenic MIRb|SINE|MIR -76880 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr1-11194 chr1 241992820 241993030 + 11.0 0.000 Intergenic AluJb|SINE|Alu 6173 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr2-2302 chr2 75547388 75547598 + 11.0 0.000 intron (NM_001369524, intron 2 of 5) MIRb|SINE|MIR 13446 NM_001369525 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chrX-2683 chrX 118347219 118347429 + 11.0 0.000 intron (NM_001184966, intron 1 of 17) intron (NM_001184966, intron 1 of 17) 1218 NM_001184965 54521 Hs.98510 NM_019045 ENSG00000131725 WDR44 RAB11BP|RPH11|SYM-4 WD repeat domain 44 protein-coding chr6-1639 chr6 119426641 119426851 + 11.0 0.000 Intergenic Intergenic 64556 NR_046100 285762 Hs.571063 NR_046100 LOC285762 - uncharacterized LOC285762 ncRNA chr1-6524 chr1 26838965 26839175 + 11.0 0.000 intron (NM_032283, intron 2 of 7) intron (NM_032283, intron 2 of 7) 12382 NM_032283 84243 Hs.523710 NM_032283 ENSG00000204160 ZDHHC18 DHHC-18|DHHC18 zinc finger DHHC-type containing 18 protein-coding chr14-1823 chr14 51119186 51119396 + 11.0 0.000 Intergenic MIR|SINE|MIR -23587 NM_052978 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr1-2968 chr1 151200380 151200590 + 11.0 0.000 intron (NM_001135637, intron 1 of 13) intron (NM_001135637, intron 1 of 13) 1933 NM_003557 8394 Hs.655131 NM_003557 ENSG00000143398 PIP5K1A - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha protein-coding chr1-1500 chr1 9413276 9413486 + 11.0 0.000 Intergenic Intergenic 15535 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr10-3472 chr10 61897668 61897878 + 11.0 0.000 Intergenic Intergenic -3926 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr6-1277 chr6 96522046 96522256 + 11.0 0.000 intron (NM_015323, intron 1 of 18) CpG 345 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr9-3578 chr9 74729458 74729668 + 11.0 0.000 intron (NM_017662, intron 37 of 38) intron (NM_017662, intron 37 of 38) 114029 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr10-1858 chr10 73208467 73208677 + 11.0 0.000 intron (NM_173348, intron 5 of 13) intron (NM_173348, intron 5 of 13) 38683 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding chr11-2867 chr11 16960405 16960615 + 11.0 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -34488 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr4-2312 chr4 85600465 85600675 + 11.0 0.000 intron (NM_001025616, intron 2 of 9) intron (NM_001025616, intron 2 of 9) -121898 NR_039656 100616349 NR_039656 ENSG00000266421 MIR4451 mir-4451 microRNA 4451 ncRNA chr10-8625 chr10 97971598 97971808 + 11.0 0.000 intron (NM_001206528, intron 2 of 14) intron (NM_001206528, intron 2 of 14) 58918 NM_018058 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr18-818 chr18 3703937 3704147 + 11.0 0.000 intron (NM_001308390, intron 4 of 10) intron (NM_001308390, intron 4 of 10) 100305 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chrX-597 chrX 124406690 124406900 + 11.0 0.000 intron (NM_014253, intron 24 of 30) intron (NM_014253, intron 24 of 30) 60513 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr8-2301 chr8 130212164 130212374 + 11.0 0.000 intron (NM_001362925, intron 5 of 29) intron (NM_001362925, intron 5 of 29) 84264 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr1-6979 chr1 162627127 162627337 + 11.0 0.000 Intergenic Intergenic -3631 NM_001354983 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr13-2304 chr13 31825108 31825318 + 11.0 0.000 Intergenic LTR16A|LTR|ERVL -21570 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chrX-1391 chrX 154359388 154359598 + 11.0 0.000 exon (NM_001456, exon 24 of 47) exon (NM_001456, exon 24 of 47) 15141 NM_001110556 2316 Hs.195464 NM_001456 ENSG00000196924 FLNA ABP-280|ABPX|CSBS|CVD1|FGS2|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD filamin A protein-coding chr12-554 chr12 6867391 6867601 + 11.0 0.000 promoter-TSS (NM_001258026) promoter-TSS (NM_001258026) -33 NM_000365 7167 Hs.524219 NM_000365 ENSG00000111669 TPI1 HEL-S-49|TIM|TPI|TPID triosephosphate isomerase 1 protein-coding chr11-5012 chr11 76155620 76155830 + 11.0 0.000 Intergenic L1M4a1|LINE|L1 50777 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr3-9097 chr3 28268646 28268856 + 11.0 0.000 intron (NM_182523, intron 2 of 3) intron (NM_182523, intron 2 of 3) 27132 NM_001331187 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr9-4019 chr9 40924778 40924988 + 11.0 0.000 Intergenic CER|Satellite|Satellite 4209 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr17-4555 chr17 79828616 79828826 + 11.0 0.000 Intergenic Intergenic 5269 NR_146504 105371919 NR_146504 ENSG00000262772 LINC01977 - long intergenic non-protein coding RNA 1977 ncRNA chr11-2770 chr11 66523425 66523635 + 11.0 0.000 exon (NM_024649, exon 10 of 17) exon (NM_024649, exon 10 of 17) 12895 NM_024649 582 Hs.502915 NM_024649 ENSG00000174483 BBS1 BBS2L2 Bardet-Biedl syndrome 1 protein-coding chr4-7234 chr4 44207929 44208139 + 11.0 0.000 intron (NM_198353, intron 1 of 1) intron (NM_198353, intron 1 of 1) 190972 NR_131958 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr2-4870 chr2 108998249 108998459 + 11.0 0.000 Intergenic Intergenic -9134 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr2-3867 chr2 37740348 37740558 + 11.0 0.000 Intergenic Charlie29a|DNA|hAT-Charlie -67918 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr22-2378 chr22 46437109 46437319 + 11.0 0.000 intron (NM_014246, intron 3 of 34) intron (NM_014246, intron 3 of 34) 100406 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr3-9655 chr3 60932814 60933024 + 11.0 0.000 intron (NR_148922, intron 3 of 3) intron (NR_148922, intron 3 of 3) -315049 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr15-864 chr15 40263376 40263586 + 11.0 0.000 intron (NM_001128629, intron 2 of 9) intron (NM_001128629, intron 2 of 9) 10303 NM_001276717 56924 Hs.732375 NM_020168 ENSG00000137843 PAK6 PAK5 p21 (RAC1) activated kinase 6 protein-coding chr1-6347 chr1 6330352 6330562 + 11.0 0.000 intron (NM_181866, intron 4 of 8) intron (NM_181866, intron 4 of 8) 28472 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr14-2168 chr14 91957806 91958016 + 11.0 0.000 Intergenic Intergenic -10209 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr17-2190 chr17 73342129 73342339 + 11.0 0.000 intron (NM_001144952, intron 44 of 44) intron (NM_001144952, intron 44 of 44) -30233 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr13-1606 chr13 45690984 45691194 + 11.0 0.000 intron (NR_125786, intron 1 of 3) intron (NR_125786, intron 1 of 3) 10095 NR_125786 103752581 NR_125786 LINC01055 - long intergenic non-protein coding RNA 1055 ncRNA chr19-1961 chr19 49021544 49021754 + 11.0 0.000 Intergenic Intergenic -2165 NR_073552 101059948 Hs.569932 NR_073552 ENSG00000268655 LOC101059948 - uncharacterized LOC101059948 ncRNA chr12-6601 chr12 125562588 125562798 + 11.0 0.000 intron (NM_052907, intron 4 of 8) THE1B|LTR|ERVL-MaLR -59759 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr8-2438 chr8 106499878 106500088 + 11.0 0.000 intron (NM_001198532, intron 1 of 15) intron (NM_001198532, intron 1 of 15) 52059 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr14-3420 chr14 96413243 96413453 + 11.0 0.000 intron (NM_001350890, intron 4 of 16) LTR33|LTR|ERVL 21220 NM_001350888 122481 Hs.667462 NM_152327 ENSG00000140057 AK7 AK 7|SPGF27 adenylate kinase 7 protein-coding chr16-1647 chr16 29604871 29605081 + 11.0 0.000 intron (NR_135317, intron 1 of 11) intron (NR_135317, intron 1 of 11) -5711 NR_049833 100847041 NR_049833 ENSG00000266758 MIR3680-2 - microRNA 3680-2 ncRNA chr4-5449 chr4 26267200 26267410 + 11.0 0.000 Intergenic Intergenic -52405 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chrX-1262 chrX 103717053 103717263 + 11.0 0.000 intron (NM_001024452, intron 7 of 8) intron (NM_001024452, intron 7 of 8) 6249 NM_182541 203562 Hs.98843 NM_182541 ENSG00000179363 TMEM31 - transmembrane protein 31 protein-coding chr22-2353 chr22 43291848 43292058 + 11.0 0.000 intron (NM_173050, intron 3 of 21) MIR|SINE|MIR 16011 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr1-5414 chr1 21652363 21652573 + 11.0 0.000 promoter-TSS (NM_001145658) promoter-TSS (NM_001145658) -570 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr4-1209 chr4 110476191 110476401 + 11.0 0.000 5' UTR (NM_001977, exon 1 of 20) 5' UTR (NM_001977, exon 1 of 20) 141 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr19-3705 chr19 34690002 34690212 + 11.0 0.000 Intergenic Intergenic 12429 NM_001289187 55900 Hs.436350 NM_018443 ENSG00000089335 ZNF302 HSD16|MST154|MSTP154|ZNF135L|ZNF140L|ZNF327 zinc finger protein 302 protein-coding chr15-904 chr15 51369069 51369279 + 11.0 0.000 intron (NM_181789, intron 1 of 9) intron (NM_181789, intron 1 of 9) -8072 NM_001330297 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr10-4535 chr10 96573186 96573396 + 11.0 0.000 intron (NM_020123, intron 2 of 14) MIR3|SINE|MIR 13721 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr16-1163 chr16 70779275 70779485 + 11.0 0.000 intron (NM_001351157, intron 8 of 17) intron (NM_001351157, intron 8 of 17) 21778 NM_001351157 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|TAX1BP2|TRX VAC14 component of PIKFYVE complex protein-coding chr16-2027 chr16 19811316 19811526 + 11.0 0.000 intron (NR_130968, intron 7 of 8) intron (NR_130968, intron 7 of 8) 73427 NM_016235 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chr6-3201 chr6 132334163 132334373 + 11.0 0.000 intron (NM_015529, intron 4 of 11) L2|LINE|L2 67207 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr18-752 chr18 79245680 79245890 + 11.0 0.000 intron (NR_148360, intron 11 of 31) intron (NR_148360, intron 11 of 31) -150145 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr3-3196 chr3 187997207 187997417 + 11.0 0.000 Intergenic Intergenic -20905 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr16-4514 chr16 58821341 58821551 + 11.0 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -87130 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr2-7254 chr2 230899324 230899534 + 11.0 0.000 intron (NR_038238, intron 3 of 3) MLT1N2|LTR|ERVL-MaLR 12883 NR_038238 151484 Hs.559309 NR_038238 ENSG00000232520 LOC151484 - uncharacterized LOC151484 ncRNA chr8-4702 chr8 140558850 140559060 + 11.0 0.000 intron (NM_001164623, intron 6 of 17) MIRb|SINE|MIR 46959 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr6-5930 chr6 68852114 68852324 + 11.0 0.000 intron (NM_001704, intron 3 of 31) intron (NM_001704, intron 3 of 31) 216937 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr7-6622 chr7 108425879 108426089 + 11.0 0.000 intron (NM_001371132, intron 1 of 30) intron (NM_001371132, intron 1 of 30) 30413 NM_001193583 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr1-16415 chr1 225609895 225610105 + 11.0 0.000 intron (NM_001008493, intron 1 of 14) HAL1|LINE|L1 43123 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr3-5433 chr3 171967343 171967553 + 11.0 0.000 Intergenic Intergenic -66708 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA chr5-2833 chr5 55203777 55203987 + 11.0 0.000 Intergenic AluSx|SINE|Alu 23433 NM_001190787 345643 Hs.394578 NM_001190787 ENSG00000234602 MCIDAS IDAS|MCI|MCIN multiciliate differentiation and DNA synthesis associated cell cycle protein protein-coding chr12-6573 chr12 121659440 121659650 + 11.0 0.000 intron (NM_173855, intron 1 of 5) AluSz|SINE|Alu 10109 NM_173855 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 - MORN repeat containing 3 protein-coding chr20-1752 chr20 49200694 49200904 + 11.0 0.000 intron (NM_001319135, intron 1 of 14) AluJb|SINE|Alu -12429 NM_017454 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding chr9-1121 chr9 95426683 95426893 + 11.0 0.000 Intergenic Intergenic -36821 NR_038982 100507346 Hs.661847 NR_038982 LOC100507346 - uncharacterized LOC100507346 ncRNA chr14-907 chr14 63908822 63909032 + 11.0 0.000 intron (NM_015180, intron 1 of 114) intron (NM_015180, intron 1 of 114) 55923 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr11-4132 chr11 44323642 44323852 + 11.0 0.000 Intergenic Intergenic -13608 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr4-3264 chr4 97691151 97691361 + 11.0 0.000 intron (NM_174952, intron 10 of 10) L1PBa|LINE|L1 324330 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr5-5808 chr5 176735805 176736015 + 11.0 0.000 Intergenic MIRb|SINE|MIR -7295 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr21-590 chr21 43655423 43655633 + 11.0 0.000 intron (NM_007031, intron 3 of 8) LTR33|LTR|ERVL 3960 NM_007031 11077 Hs.406157 NM_007031 ENSG00000160207 HSF2BP - heat shock transcription factor 2 binding protein protein-coding chr1-8506 chr1 153554047 153554257 + 11.0 0.000 Intergenic Intergenic -4894 NM_002960 6274 Hs.557609 NM_002960 ENSG00000188015 S100A3 S100E S100 calcium binding protein A3 protein-coding chr21-431 chr21 36104890 36105100 + 11.0 0.000 non-coding (NR_147887, exon 1 of 2) non-coding (NR_147887, exon 1 of 2) 114 NR_147887 105369306 NR_147887 ENSG00000233393 LOC105369306 - uncharacterized LOC105369306 ncRNA chr9-2348 chr9 77926485 77926695 + 11.0 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 105221 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr2-9097 chr2 204309587 204309797 + 11.0 0.000 Intergenic Intergenic -235783 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr8-2659 chr8 80084299 80084509 + 11.0 0.000 intron (NM_001025253, intron 1 of 7) intron (NM_001025253, intron 1 of 7) -3573 NM_001287142 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr14-4980 chr14 75525125 75525335 + 11.0 0.000 intron (NM_006399, intron 2 of 2) intron (NM_006399, intron 2 of 2) 2761 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr18-3310 chr18 55120935 55121145 + 11.0 0.000 intron (NR_110743, intron 1 of 2) intron (NR_110743, intron 1 of 2) 3266 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr8-1309 chr8 119837674 119837884 + 11.0 0.000 intron (NM_024094, intron 8 of 8) L2|LINE|L2 -4938 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr1-5835 chr1 228295758 228295968 + 11.0 0.000 intron (NM_052843, intron 43 of 80) MLT1B-int|LTR|ERVL-MaLR -82199 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr16-6202 chr16 27777630 27777840 + 11.0 0.000 exon (NM_015202, exon 26 of 28) exon (NM_015202, exon 26 of 28) -58706 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr3-3929 chr3 49570328 49570538 + 11.0 0.000 intron (NM_003458, intron 1 of 11) intron (NM_003458, intron 1 of 11) 15956 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr7-4092 chr7 31311783 31311993 + 11.0 0.000 Intergenic Intergenic 28838 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr3-6806 chr3 145509978 145510188 + 11.0 0.000 Intergenic LTR33|LTR|ERVL 559102 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr16-1454 chr16 83307231 83307441 + 11.0 0.000 intron (NM_001220489, intron 4 of 12) intron (NM_001220489, intron 4 of 12) -201010 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr9-6774 chr9 27161967 27162177 + 11.0 0.000 intron (NM_001290077, intron 2 of 21) intron (NM_001290077, intron 2 of 21) 52931 NM_001290077 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr8-3843 chr8 31221666 31221876 + 11.0 0.000 Intergenic L1PA10|LINE|L1 -188415 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr6-8182 chr6 132960110 132960320 + 11.0 0.000 Intergenic Intergenic -127865 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr15-3327 chr15 79983816 79984026 + 11.0 0.000 Intergenic L2a|LINE|L2 -12725 NM_004049 597 Hs.227817 NM_004049 ENSG00000140379 BCL2A1 ACC-1|ACC-2|ACC1|ACC2|BCL2L5|BFL1|GRS|HBPA1 BCL2 related protein A1 protein-coding chr1-9970 chr1 80719563 80719773 + 11.0 0.000 Intergenic L1MA5A|LINE|L1 78381 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr12-5428 chr12 122471573 122471783 + 11.0 0.000 TTS (NM_017612) TTS (NM_017612) 29254 NM_001350937 55596 Hs.37706 NM_017612 ENSG00000033030 ZCCHC8 - zinc finger CCHC-type containing 8 protein-coding chrX-1434 chrX 52983738 52983948 + 11.0 0.000 intron (NM_001242492, intron 1 of 4) MER68-int|LTR|ERVL 11629 NM_001242492 29057 Hs.6451 NM_014138 ENSG00000268350 FAM156A PRO0659|TMEM29 family with sequence similarity 156 member A protein-coding chr10-2437 chr10 4451176 4451386 + 11.0 0.000 Intergenic Intergenic 44812 NR_108056 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr21-1175 chr21 42502480 42502690 + 11.0 0.000 intron (NM_018964, intron 2 of 20) L2c|LINE|L2 2963 NM_018964 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr7-2347 chr7 1857575 1857785 + 11.0 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) -13427 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr21-642 chr21 15841941 15842151 + 11.0 0.000 intron (NM_001283042, intron 17 of 24) intron (NM_001283042, intron 17 of 24) 112064 NM_001283042 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr13-1797 chr13 29620350 29620560 + 11.0 0.000 Intergenic L1MEd|LINE|L1 -24767 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr19-3466 chr19 33397258 33397468 + 11.0 0.000 intron (NM_001166056, intron 10 of 12) intron (NM_001166056, intron 10 of 12) 22839 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr1-13757 chr1 16411031 16411241 + 11.0 0.000 intron (NM_001353349, intron 2 of 10) L2|LINE|L2 26288 NM_198546 374955 Hs.705501 NM_198546 ENSG00000187144 SPATA21 spergen-2|spergen2 spermatogenesis associated 21 protein-coding chr19-2165 chr19 11191568 11191778 + 11.0 0.000 intron (NM_001136191, intron 4 of 12) MLT1K|LTR|ERVL-MaLR 2917 NM_015493 25959 Hs.284208 NM_015493 ENSG00000197256 KANK2 ANKRD25|MXRA3|NPHS16|PPKWH|SIP KN motif and ankyrin repeat domains 2 protein-coding chr21-606 chr21 23772165 23772375 + 11.0 0.000 Intergenic AluSc|SINE|Alu -387435 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA chr14-1319 chr14 69044855 69045065 + 11.0 0.000 Intergenic Intergenic 65278 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr12-2432 chr12 50715224 50715434 + 11.0 0.000 intron (NM_173602, intron 23 of 37) MLT1I|LTR|ERVL-MaLR -48772 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr12-2303 chr12 120736764 120736974 + 11.0 0.000 intron (NM_000017, intron 2 of 9) intron (NM_000017, intron 2 of 9) 11043 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr14-4644 chr14 54590048 54590258 + 11.0 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 22541 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr3-1457 chr3 49454308 49454518 + 11.0 0.000 Intergenic AluJr|SINE|Alu -14290 NM_001177643 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr9-3153 chr9 110880570 110880780 + 11.0 0.000 intron (NM_001351417, intron 5 of 5) MIR|SINE|MIR 152413 NM_001369398 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr18-971 chr18 72370760 72370970 + 11.0 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 173477 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr6-1456 chr6 4210848 4211058 + 11.0 0.000 Intergenic Intergenic -20924 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr11-4367 chr11 74681678 74681888 + 11.0 0.000 Intergenic Intergenic 29584 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr3-8820 chr3 8038094 8038304 + 11.0 0.000 Intergenic Intergenic -21892 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr5-2864 chr5 79560871 79561081 + 11.0 0.000 Intergenic MLT2B4|LTR|ERVL -46842 NM_004272 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr12-1578 chr12 122533908 122534118 + 11.0 0.000 intron (NM_014708, intron 2 of 63) intron (NM_014708, intron 2 of 63) 6764 NM_014708 9735 Hs.300559 NM_014708 ENSG00000184445 KNTC1 ROD kinetochore associated 1 protein-coding chr1-9586 chr1 44166290 44166500 + 11.0 0.000 Intergenic AluSq2|SINE|Alu -24764 NM_001358438 105378952 NM_001358438 ENSG00000283039 KLF18 - Kruppel like factor 18 protein-coding chr5-4529 chr5 15220620 15220830 + 11.0 0.000 intron (NR_109944, intron 2 of 2) ERV3-16A3_I-int|LTR|ERVL 45835 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr20-4397 chr20 58431208 58431418 + 11.0 0.000 intron (NM_001195677, intron 2 of 2) Charlie1|DNA|hAT-Charlie 42084 NM_001195677 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr7-2877 chr7 121945589 121945799 + 11.0 0.000 intron (NM_001206839, intron 2 of 28) intron (NM_001206839, intron 2 of 28) 72533 NM_001369396 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr15-4051 chr15 66349517 66349727 + 11.0 0.000 intron (NM_001289986, intron 3 of 6) AluJb|SINE|Alu -2280 NR_004388 692149 NR_004388 ENSG00000252712 SCARNA14 U100 small Cajal body-specific RNA 14 ncRNA chr9-3242 chr9 819063 819273 + 11.0 0.000 Intergenic Intergenic -22529 NM_021951 1761 Hs.98586 NM_021951 ENSG00000137090 DMRT1 CT154|DMT1 doublesex and mab-3 related transcription factor 1 protein-coding chr22-1069 chr22 20292931 20293141 + 11.0 0.000 Intergenic Intergenic -24718 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chr12-3963 chr12 11488446 11488656 + 11.0 0.000 Intergenic L2a|LINE|L2 -1873 NR_148969 440084 Hs.121321 NR_148969 LOC440084 - uncharacterized LOC440084 ncRNA chr4-8110 chr4 125925939 125926149 + 11.0 0.000 Intergenic Intergenic 418785 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr3-4960 chr3 11251610 11251820 + 11.0 0.000 promoter-TSS (NM_000861) promoter-TSS (NM_000861) -984 NM_000861 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr3-3140 chr3 159964355 159964565 + 11.0 0.000 intron (NR_108088, intron 9 of 9) HAL1|LINE|L1 -24375 NM_000882 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr13-1244 chr13 98449979 98450189 + 11.0 0.000 TTS (NM_003576) TTS (NM_003576) 72041 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr19-2079 chr19 41226014 41226224 + 11.0 0.000 promoter-TSS (NM_001278599) promoter-TSS (NM_001278599) -636 NM_001278599 558 Hs.590970 NM_001699 ENSG00000167601 AXL ARK|JTK11|Tyro7|UFO AXL receptor tyrosine kinase protein-coding chr1-5100 chr1 117146987 117147197 + 11.0 0.000 intron (NM_024626, intron 5 of 5) intron (NM_024626, intron 5 of 5) -25343 NM_001145635 80263 Hs.301526 NM_025188 ENSG00000134253 TRIM45 RNF99 tripartite motif containing 45 protein-coding chr3-6857 chr3 150833033 150833243 + 11.0 0.000 Intergenic Intergenic -69969 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding chr14-2024 chr14 60102484 60102694 + 11.0 0.000 intron (NM_022495, intron 1 of 9) intron (NM_022495, intron 1 of 9) 10666 NM_001330177 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chr2-4495 chr2 9813780 9813990 + 11.0 0.000 Intergenic Intergenic -29557 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr17-2017 chr17 2763391 2763601 + 11.0 0.000 Intergenic AluSx1|SINE|Alu -13262 NM_001330058 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chrX-1273 chrX 109478129 109478339 + 11.0 0.000 intron (NM_001522, intron 1 of 19) intron (NM_001522, intron 1 of 19) 3852 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr18-1331 chr18 76348121 76348331 + 11.0 0.000 Intergenic Intergenic 138716 NR_146507 105372207 Hs.303880 NR_146507 LINC01893 - long intergenic non-protein coding RNA 1893 ncRNA chr13-1645 chr13 61218627 61218837 + 11.0 0.000 Intergenic SATR1|Satellite|Satellite -18852 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr1-7623 chr1 2258748 2258958 + 11.0 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 30534 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr16-3025 chr16 46520030 46520240 + 11.0 0.000 intron (NR_026556, intron 8 of 16) intron (NR_026556, intron 8 of 16) 48962 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr17-2256 chr17 16516530 16516740 + 11.0 0.000 Intergenic Intergenic -24442 NM_207387 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr2-4326 chr2 237905164 237905374 + 11.0 0.000 intron (NM_001308353, intron 3 of 3) intron (NM_001308353, intron 3 of 3) 45646 NM_001308353 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr6-1608 chr6 45998727 45998937 + 11.0 0.000 intron (NM_001370649, intron 1 of 5) intron (NM_001370649, intron 1 of 5) 17028 NM_016929 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr6-2280 chr6 77015377 77015587 + 11.0 0.000 Intergenic Intergenic -421859 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chrX-1230 chrX 82287873 82288083 + 11.0 0.000 Intergenic L1PA13|LINE|L1 1085876 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr11-3993 chr11 3105478 3105688 + 11.0 0.000 intron (NM_020896, intron 9 of 21) intron (NM_020896, intron 9 of 21) -48160 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr11-3435 chr11 63982336 63982546 + 11.0 0.000 Intergenic Intergenic -3412 NR_003089 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr12-2393 chr12 30929668 30929878 + 11.0 0.000 intron (NM_001370301, intron 1 of 6) intron (NM_001370301, intron 1 of 6) 2869 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr17-5136 chr17 7885932 7886142 + 11.0 0.000 promoter-TSS (NM_001330111) promoter-TSS (NM_001330111) -617 NM_001330111 84316 Hs.565094 NM_032356 ENSG00000183011 NAA38 LSMD1|MAK31|PFAAP2 N(alpha)-acetyltransferase 38, NatC auxiliary subunit protein-coding chr7-6427 chr7 158037375 158037585 + 11.0 0.000 intron (NM_130843, intron 10 of 21) Tigger3a|DNA|TcMar-Tigger 182895 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr5-7751 chr5 60752185 60752395 + 11.0 0.000 3' UTR (NM_001297618, exon 9 of 9) 3' UTR (NM_001297618, exon 9 of 9) -52124 NM_001145208 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr5-3372 chr5 138937324 138937534 + 11.0 0.000 Intergenic Intergenic 62029 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr1-3497 chr1 117466629 117466839 + 11.0 0.000 intron (NM_006699, intron 8 of 12) intron (NM_006699, intron 8 of 12) 99285 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr22-2646 chr22 35293088 35293298 + 11.0 0.000 intron (NM_001003681, intron 10 of 10) intron (NM_001003681, intron 10 of 10) -6082 NM_001135729 10043 Hs.474705 NM_005488 ENSG00000100284 TOM1 - target of myb1 membrane trafficking protein protein-coding chr8-6388 chr8 54741292 54741502 + 11.0 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 125301 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr19-4586 chr19 11610955 11611165 + 11.0 0.000 intron (NM_001290083, intron 2 of 4) AluSz|SINE|Alu 13577 NM_001290085 199692 Hs.526665 NM_145295 ENSG00000198551 ZNF627 - zinc finger protein 627 protein-coding chr3-3105 chr3 141979150 141979360 + 11.0 0.000 intron (NM_001178142, intron 1 of 7) Tigger3b|DNA|TcMar-Tigger 21132 NM_001178140 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr6-3786 chr6 20840817 20841027 + 11.0 0.000 intron (NM_017774, intron 8 of 15) intron (NM_017774, intron 8 of 15) 306465 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr17-2333 chr17 57241847 57242057 + 11.0 0.000 Intergenic L2c|LINE|L2 -13899 NM_001322250 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr1-6555 chr1 31029590 31029800 + 11.0 0.000 intron (NM_001020658, intron 2 of 21) intron (NM_001020658, intron 2 of 21) 36022 NM_014676 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr17-7110 chr17 74054779 74054989 + 11.0 0.000 Intergenic (TCTCTC)n|Simple_repeat|Simple_repeat -148794 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr1-1978 chr1 222713297 222713507 + 11.0 0.000 promoter-TSS (NM_001288580) promoter-TSS (NM_001288580) 81 NM_001288581 148362 Hs.534965 NM_144695 ENSG00000162819 BROX C1orf58 BRO1 domain and CAAX motif containing protein-coding chr13-1591 chr13 40508191 40508401 + 11.0 0.000 Intergenic Intergenic -27290 NR_024505 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr4-5213 chr4 165759941 165760151 + 11.0 0.000 intron (NR_121676, intron 5 of 5) LTR50|LTR|ERVL -16975 NR_121677 101928131 Hs.406479 NR_121677 LOC101928131 - uncharacterized LOC101928131 ncRNA chr6-4303 chr6 15076694 15076904 + 11.0 0.000 Intergenic Intergenic -169270 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr2-4860 chr2 98601674 98601884 + 11.0 0.000 intron (NM_001008215, intron 2 of 2) MER1B|DNA|hAT-Charlie 6733 NM_001008215 493753 Hs.596537 NM_001008215 ENSG00000183513 COA5 6330578E17Rik|C2orf64|CEMCOX3|Pet191 cytochrome c oxidase assembly factor 5 protein-coding chr5-2460 chr5 136188522 136188732 + 11.0 0.000 Intergenic MIRb|SINE|MIR 4535 NM_001350994 389332 Hs.127680 NM_001350994 ENSG00000271824 SMIM32 - small integral membrane protein 32 protein-coding chr4-1977 chr4 168787896 168788106 + 11.0 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -44094 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr6-3925 chr6 77504585 77504795 + 11.0 0.000 Intergenic LTR9|LTR|ERV1 -40668 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr7-7397 chr7 70705177 70705387 + 11.0 0.000 intron (NM_015570, intron 6 of 18) intron (NM_015570, intron 6 of 18) -426862 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr19-3133 chr19 17619001 17619211 + 11.0 0.000 intron (NM_001080421, intron 36 of 41) intron (NM_001080421, intron 36 of 41) 63457 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr3-4987 chr3 16567249 16567459 + 11.0 0.000 Intergenic L2a|LINE|L2 31036 NR_103843 100996597 Hs.599432 NR_103843 ENSG00000233570 LINC00690 - long intergenic non-protein coding RNA 690 ncRNA chr3-2382 chr3 177491496 177491706 + 11.0 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 49680 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr5-973 chr5 180810562 180810772 + 11.0 0.000 promoter-TSS (NR_157151) promoter-TSS (NR_157151) -211 NM_001364384 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr5-7951 chr5 80399576 80399786 + 11.0 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -8383 NR_146172 9765 Hs.482660 NM_014733 ENSG00000039319 ZFYVE16 PPP1R69 zinc finger FYVE-type containing 16 protein-coding chr6-7672 chr6 85135726 85135936 + 11.0 0.000 Intergenic Intergenic 254355 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr13-2134 chr13 98700043 98700253 + 11.0 0.000 intron (NM_005073, intron 18 of 22) L1MD|LINE|L1 52524 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr2-4214 chr2 211251866 211252076 + 11.0 0.000 Intergenic LTR16E1|LTR|ERVL 634400 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr8-1884 chr8 22880824 22881034 + 11.0 0.000 intron (NR_125433, intron 2 of 3) LTR33A_|LTR|ERVL 2957 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr18-190 chr18 80247555 80247765 + 11.0 0.000 promoter-TSS (NM_032510) promoter-TSS (NM_032510) -146 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr9-3004 chr9 94973642 94973852 + 11.0 0.000 intron (NM_032823, intron 8 of 14) intron (NM_032823, intron 8 of 14) -28193 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr2-7418 chr2 9699675 9699885 + 11.0 0.000 Intergenic Intergenic -68783 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr8-3019 chr8 123617215 123617425 + 11.0 0.000 Intergenic L1MC4|LINE|L1 36481 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr12-3253 chr12 64544699 64544909 + 11.0 0.000 Intergenic Intergenic -65691 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr3-4414 chr3 5194866 5195076 + 11.0 0.000 intron (NM_014674, intron 1 of 11) intron (NM_014674, intron 1 of 11) 7264 NM_014674 9695 Hs.224616 NM_014674 ENSG00000134109 EDEM1 EDEM ER degradation enhancing alpha-mannosidase like protein 1 protein-coding chr4-6213 chr4 55803310 55803520 + 11.0 0.000 Intergenic Intergenic -16588 NM_001351574 644145 Hs.570825 NM_001351574 ENSG00000250821 EXOC1L - exocyst complex component 1 like protein-coding chr19-3419 chr19 17805784 17805994 + 11.0 0.000 intron (NM_014256, intron 1 of 2) AluJo|SINE|Alu 10751 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr9-3363 chr9 119003285 119003495 + 11.0 0.000 Intergenic Intergenic 323719 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr6-2233 chr6 45421491 45421701 + 11.0 0.000 promoter-TSS (NM_001369405) promoter-TSS (NM_001369405) -679 NM_001369405 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chrX-1205 chrX 71541898 71542108 + 11.0 0.000 intron (NM_181672, intron 3 of 21) intron (NM_181672, intron 3 of 21) 8899 NM_181672 8473 Hs.405410 NM_003605 ENSG00000147162 OGT HINCUT-1|HRNT1|MRX106|O-GLCNAC|OGT1 O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding chr3-3370 chr3 46047102 46047312 + 11.0 0.000 Intergenic HERVK3-int|LTR|ERVK -19724 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr2-2122 chr2 43269800 43270010 + 11.0 0.000 intron (NM_001083953, intron 36 of 37) intron (NM_001083953, intron 36 of 37) 42694 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr16-2020 chr16 4594027 4594237 + 11.0 0.000 intron (NM_001145011, intron 12 of 15) intron (NM_001145011, intron 12 of 15) 20756 NM_145253 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr10-2604 chr10 77408838 77409048 + 11.0 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 58071 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr3-1470 chr3 64688010 64688220 + 11.0 0.000 promoter-TSS (NM_182920) promoter-TSS (NM_182920) -115 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr14-1698 chr14 103124759 103124969 + 11.0 0.000 intron (NM_001371220, intron 1 of 12) intron (NM_001371220, intron 1 of 12) 1403 NM_001371221 chr11-3012 chr11 442450 442660 + 11.0 0.000 promoter-TSS (NM_001012302) promoter-TSS (NM_001012302) -544 NM_001012302 338440 Hs.501622 NM_001012302 ENSG00000185101 ANO9 PIG5|TMEM16J|TP53I5 anoctamin 9 protein-coding chr22-777 chr22 41237951 41238161 + 11.0 0.000 exon (NM_138481, exon 3 of 6) exon (NM_138481, exon 3 of 6) 2875 NM_138481 150356 Hs.344488 NM_138481 ENSG00000100399 CHADL SLRR4B chondroadherin like protein-coding chr8-3547 chr8 124040908 124041118 + 11.0 0.000 promoter-TSS (NR_040044) promoter-TSS (NR_040044) -231 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr5-2792 chr5 90492 90702 + 11.0 0.000 Intergenic Intergenic -1571 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr12-1224 chr12 6697887 6698097 + 11.0 0.000 intron (NM_001244015, intron 2 of 5) intron (NM_001244015, intron 2 of 5) 2423 NM_001244015 196500 Hs.44067 NM_153685 ENSG00000139200 PIANP C12orf53|LEDA1|PANP|leda-1 PILR alpha associated neural protein protein-coding chr16-6166 chr16 24134386 24134596 + 11.0 0.000 intron (NM_002738, intron 9 of 16) AluSx3|SINE|Alu -68625 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr11-3242 chr11 72627787 72627997 + 11.0 0.000 intron (NM_001143839, intron 1 of 29) intron (NM_001143839, intron 1 of 29) -12762 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chrX-1158 chrX 44905321 44905531 + 11.0 0.000 intron (NR_111960, intron 2 of 27) Tigger3a|DNA|TcMar-Tigger 32251 NM_001291417 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding chr8-2619 chr8 61663438 61663648 + 11.0 0.000 3' UTR (NM_032467, exon 5 of 5) 3' UTR (NM_032467, exon 5 of 5) 26268 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr9-2153 chr9 123363404 123363614 + 11.0 0.000 intron (NM_173689, intron 2 of 12) intron (NM_173689, intron 2 of 12) -5270 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr9-1965 chr9 92134076 92134286 + 11.0 0.000 intron (NR_015444, intron 2 of 12) intron (NR_015444, intron 2 of 12) 1347 NR_015444 100128076 Hs.716275 NR_015444 LOC100128076 - protein tyrosine phosphatase pseudogene pseudo chr9-2618 chr9 16501300 16501510 + 11.0 0.000 intron (NM_001317939, intron 4 of 6) intron (NM_001317939, intron 4 of 6) -225092 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr17-2715 chr17 65137221 65137431 + 11.0 0.000 promoter-TSS (NM_001081955) promoter-TSS (NM_001081955) -12 NM_001165933 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr19-3583 chr19 48424898 48425108 + 11.0 0.000 intron (NM_000836, intron 10 of 12) intron (NM_000836, intron 10 of 12) -20980 NM_031485 83743 Hs.400625 NM_031485 ENSG00000105447 GRWD1 CDW4|GRWD|RRB1|WDR28 glutamate rich WD repeat containing 1 protein-coding chr1-8354 chr1 58477488 58477698 + 11.0 0.000 Intergenic Intergenic 69133 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr5-7388 chr5 22943352 22943562 + 11.0 0.000 Intergenic Intergenic -90113 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr10-5811 chr10 109784465 109784675 + 11.0 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 138676 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr6-1840 chr6 160348529 160348739 + 11.0 0.000 exon (NM_021977, exon 1 of 11) exon (NM_021977, exon 1 of 11) 256 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr12-7535 chr12 70094735 70094945 + 11.0 0.000 Intergenic Intergenic -148190 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr9-1982 chr9 115266164 115266374 + 11.0 0.000 intron (NR_163556, intron 2 of 7) L2c|LINE|L2 124451 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr5-3293 chr5 118688475 118688685 + 11.0 0.000 Intergenic L3|LINE|CR1 92392 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chr1-4428 chr1 226134575 226134785 + 11.0 0.000 Intergenic L2b|LINE|L2 -13323 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr11-3126 chr11 43864429 43864639 + 11.0 0.000 Intergenic Intergenic -16297 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr1-5391 chr1 5601556 5601766 + 11.0 0.000 Intergenic Intergenic 261080 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr16-2686 chr16 79717002 79717212 + 11.0 0.000 Intergenic Intergenic -53364 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr7-1857 chr7 1853768 1853978 + 11.0 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) -9620 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr5-5504 chr5 142287351 142287561 + 11.0 0.000 Intergenic Intergenic 30866 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr14-2890 chr14 35990103 35990313 + 11.0 0.000 Intergenic Intergenic -80219 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chr4-8474 chr4 157915063 157915273 + 11.0 0.000 Intergenic L2|LINE|L2 -255584 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr4-1033 chr4 26048509 26048719 + 11.0 0.000 Intergenic Intergenic 134422 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr17-2974 chr17 65750670 65750880 + 11.0 0.000 intron (NM_001353129, intron 21 of 26) intron (NM_001353129, intron 21 of 26) 75676 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr9-4747 chr9 131094749 131094959 + 11.0 0.000 TTS (NM_006059) TTS (NM_006059) -1622 NR_033701 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr3-4245 chr3 141452016 141452226 + 11.0 0.000 Intergenic L2c|LINE|L2 -34906 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr10-6494 chr10 51367189 51367399 + 11.0 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 67721 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr9-2477 chr9 68812507 68812717 + 11.0 0.000 intron (NM_003558, intron 2 of 15) L4_A_Mam|LINE|RTE-X 32547 NM_138333 116224 Hs.655572 NM_138333 ENSG00000187866 FAM122A C9orf42 family with sequence similarity 122A protein-coding chr1-5760 chr1 121415101 121415311 + 11.0 0.000 Intergenic LTR16C|LTR|ERVL -17301 NR_104189 100873165 Hs.568525 NR_104189 ENSG00000230806 SRGAP2-AS1 - SRGAP2 antisense RNA 1 ncRNA chr14-3472 chr14 101548857 101549067 + 11.0 0.000 Intergenic Intergenic 11460 NR_152590 64150 Hs.525597 NR_002770 ENSG00000258498 DIO3OS C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041 DIO3 opposite strand upstream RNA ncRNA chr19-3865 chr19 19375032 19375242 + 11.0 0.000 Intergenic Intergenic -10666 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr11-4118 chr11 36811606 36811816 + 11.0 0.000 Intergenic LTR33B|LTR|ERVL -213432 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr17-2541 chr17 35254377 35254587 + 11.0 0.000 intron (NM_144975, intron 1 of 4) intron (NM_144975, intron 1 of 4) 11410 NM_144975 162394 Hs.585792 NM_144975 ENSG00000166750 SLFN5 - schlafen family member 5 protein-coding chr17-3105 chr17 8015517 8015727 + 11.0 0.000 intron (NM_000180, intron 15 of 19) intron (NM_000180, intron 15 of 19) 12952 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr3-3041 chr3 124107724 124107934 + 11.0 0.000 intron (NM_001024660, intron 1 of 59) intron (NM_001024660, intron 1 of 59) 13122 NR_028136 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr6-1497 chr6 135936160 135936370 + 11.0 0.000 intron (NM_018945, intron 1 of 12) intron (NM_018945, intron 1 of 12) 84564 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr10-4398 chr10 54476043 54476253 + 11.0 0.000 intron (NM_001142773, intron 2 of 31) MIR|SINE|MIR -10082 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr1-10419 chr1 157875511 157875721 + 11.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -33808 NM_001347698 922 Hs.134035 NM_005894 ENSG00000073754 CD5L AIM|API6|CT-2|PRO229|SP-ALPHA|Spalpha|hAIM CD5 molecule like protein-coding chr1-8526 chr1 156463790 156464000 + 11.0 0.000 3' UTR (NM_001271629, exon 11 of 11) 3' UTR (NM_001271629, exon 11 of 11) 26792 NM_001271629 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr8-4414 chr8 107264035 107264245 + 11.0 0.000 intron (NM_001199859, intron 8 of 8) intron (NM_001199859, intron 8 of 8) 72375 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr8-587 chr8 141308222 141308432 + 11.0 0.000 Intergenic CpG -32222 NR_024441 731779 Hs.586414 NR_024441 ENSG00000253595 LINC01300 - long intergenic non-protein coding RNA 1300 ncRNA chr19-1391 chr19 15363031 15363241 + 11.0 0.000 intron (NM_005858, intron 9 of 13) SVA_C|Retroposon|SVA 16651 NM_005858 10270 Hs.594496 NM_005858 ENSG00000105127 AKAP8 AKAP 95|AKAP-8|AKAP-95|AKAP95 A-kinase anchoring protein 8 protein-coding chr10-2142 chr10 60828117 60828327 + 11.0 0.000 Intergenic Intergenic 49744 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr10-2816 chr10 5574205 5574415 + 11.0 0.000 Intergenic Intergenic 21808 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr3-4942 chr3 8445986 8446196 + 11.0 0.000 intron (NR_033378, intron 3 of 3) MER5A|DNA|hAT-Charlie 55567 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr12-5490 chr12 125471599 125471809 + 11.0 0.000 intron (NM_052907, intron 3 of 8) intron (NM_052907, intron 3 of 8) 145088 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr10-2634 chr10 88835622 88835832 + 11.0 0.000 intron (NM_144590, intron 1 of 5) Tigger3c|DNA|TcMar-Tigger 16117 NM_144590 118932 Hs.217484 NM_144590 ENSG00000152766 ANKRD22 - ankyrin repeat domain 22 protein-coding chr12-2927 chr12 68733722 68733932 + 11.0 0.000 intron (NM_020401, intron 24 of 27) intron (NM_020401, intron 24 of 27) -12349 NR_149144 55508 Hs.506011 NM_018656 ENSG00000175782 SLC35E3 BLOV1 solute carrier family 35 member E3 protein-coding chr8-6261 chr8 41529772 41529982 + 11.0 0.000 intron (NM_032336, intron 1 of 7) intron (NM_032336, intron 1 of 7) 616 NM_032336 84296 Hs.656996 NM_032336 ENSG00000147536 GINS4 SLD5 GINS complex subunit 4 protein-coding chr4-1786 chr4 3294246 3294456 + 11.0 0.000 Intergenic Intergenic -19796 NM_198229 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr15-3929 chr15 38111504 38111714 + 11.0 0.000 Intergenic Intergenic -38619 NR_147200 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr13-3083 chr13 45760916 45761126 + 11.0 0.000 Intergenic Intergenic 58552 NM_001286342 220082 Hs.186363 NM_152719 ENSG00000174015 SPERT CBY2|NURIT spermatid associated protein-coding chr16-2307 chr16 19688585 19688795 + 11.0 0.000 intron (NM_001300743, intron 25 of 27) intron (NM_001300743, intron 25 of 27) -27766 NM_001305122 124152 Hs.460217 NM_153208 ENSG00000174628 IQCK - IQ motif containing K protein-coding chr2-2668 chr2 221969227 221969437 + 11.0 0.000 Intergenic Intergenic -328815 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr22-2393 chr22 50320663 50320873 + 11.0 0.000 intron (NM_001001794, intron 1 of 19) intron (NM_001001794, intron 1 of 19) 6244 NM_001001794 414918 Hs.530380 NM_001001794 ENSG00000205593 DENND6B AFI1B|FAM116B DENN domain containing 6B protein-coding chr2-3961 chr2 69017168 69017378 + 11.0 0.000 intron (NM_032208, intron 1 of 17) intron (NM_032208, intron 1 of 17) 4129 NM_053034 84168 Hs.165859 NM_018153 ENSG00000169604 ANTXR1 ATR|GAPO|TEM8 ANTXR cell adhesion molecule 1 protein-coding chr14-1155 chr14 44316961 44317171 + 11.0 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 190217 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr6-3287 chr6 157243426 157243636 + 11.0 0.000 Intergenic Intergenic 80728 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr2-4929 chr2 165787079 165787289 + 11.0 0.000 intron (NM_004482, intron 1 of 10) intron (NM_004482, intron 1 of 10) 7063 NM_004482 2591 Hs.170986 NM_004482 ENSG00000115339 GALNT3 GalNAc-T3|HFTC|HFTC1|HHS polypeptide N-acetylgalactosaminyltransferase 3 protein-coding chr6-2441 chr6 169326758 169326968 + 11.0 0.000 Intergenic Intergenic -72749 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr18-2352 chr18 38398528 38398738 + 11.0 0.000 Intergenic L1ME2|LINE|L1 741498 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr2-5396 chr2 106073469 106073679 + 11.0 0.000 intron (NM_032411, intron 2 of 3) intron (NM_032411, intron 2 of 3) 7886 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding chr14-2198 chr14 100721254 100721464 + 11.0 0.000 Intergenic L2b|LINE|L2 -5506 NM_003836 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chr2-7260 chr2 231892617 231892827 + 11.0 0.000 promoter-TSS (NR_031717) promoter-TSS (NR_031717) -424 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr3-2627 chr3 194618912 194619122 + 11.0 0.000 intron (NM_001166305, intron 5 of 10) intron (NM_001166305, intron 5 of 10) 14402 NM_001011655 93109 Hs.478729 NM_138399 ENSG00000145014 TMEM44 - transmembrane protein 44 protein-coding chr12-3971 chr12 14327858 14328068 + 11.0 0.000 Intergenic LTR33C|LTR|ERVL -37669 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr17-2314 chr17 45170804 45171014 + 11.0 0.000 TTS (NM_144608) TTS (NM_144608) 576 NR_135646 105371795 Hs.569733 NR_135646 ENSG00000267288 LOC105371795 - uncharacterized LOC105371795 ncRNA chr7-3265 chr7 6306539 6306749 + 11.0 0.000 Intergenic L1MB3|LINE|L1 -34020 NM_001367581 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr12-4135 chr12 70657163 70657373 + 11.0 0.000 intron (NM_130846, intron 8 of 9) intron (NM_130846, intron 8 of 9) -19839 NM_001330204 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase receptor type B protein-coding chr1-12955 chr1 152885071 152885281 + 11.0 0.000 TTS (NM_030663) TTS (NM_030663) 6854 NM_030663 4184 Hs.111850 NM_030663 ENSG00000163206 SMCP HSMCSGEN1|MCS|MCSP sperm mitochondria associated cysteine rich protein protein-coding chr3-5852 chr3 33156604 33156814 + 11.0 0.000 intron (NM_015551, intron 4 of 4) intron (NM_015551, intron 4 of 4) 42751 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr5-4584 chr5 27165027 27165237 + 11.0 0.000 Intergenic Intergenic -126546 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr3-4202 chr3 131221824 131222034 + 11.0 0.000 intron (NM_001353043, intron 14 of 17) MER5A|DNA|hAT-Charlie -139916 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr22-1495 chr22 37273500 37273710 + 11.0 0.000 Intergenic Intergenic -8903 NM_001318024 27128 Hs.170944 NM_013385 ENSG00000100055 CYTH4 CYT4|DJ63G5.1|PSCD4|cytohesin-4 cytohesin 4 protein-coding chr6-2081 chr6 138646877 138647087 + 11.0 0.000 Intergenic Intergenic -44686 NR_033896 441172 Hs.92290 NR_033896 FLJ46906 - uncharacterized LOC441172 ncRNA chr18-1842 chr18 23201011 23201221 + 11.0 0.000 intron (NM_001256438, intron 3 of 9) L3|LINE|CR1 45291 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr10-4552 chr10 100693553 100693763 + 11.0 0.000 Intergenic AluJr|SINE|Alu -41738 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr5-4201 chr5 116195753 116195963 + 11.0 0.000 intron (NM_001308080, intron 5 of 6) L1PB1|LINE|L1 -59885 NR_162144 113219464 NR_162144 MIR12130 - microRNA 12130 ncRNA chr18-2395 chr18 2592733 2592943 + 11.0 0.000 intron (NM_006101, intron 10 of 16) intron (NM_006101, intron 10 of 16) 21281 NM_006101 10403 Hs.414407 NM_006101 ENSG00000080986 NDC80 HEC|HEC1|HsHec1|KNTC2|TID3|hsNDC80 NDC80 kinetochore complex component protein-coding chr3-7397 chr3 89268215 89268425 + 11.0 0.000 intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 160699 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr3-4007 chr3 60076403 60076613 + 11.0 0.000 intron (NM_001320901, intron 1 of 6) intron (NM_001320901, intron 1 of 6) 4401 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr14-2569 chr14 37420650 37420860 + 11.0 0.000 intron (NM_138731, intron 11 of 13) MLT1K|LTR|ERVL-MaLR 174494 NM_004496 3169 Hs.163484 NM_004496 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding chr2-4858 chr2 96879464 96879674 + 11.0 0.000 intron (NM_001122646, intron 14 of 16) intron (NM_001122646, intron 14 of 16) -9489 NM_017789 54910 Hs.516220 NM_017789 ENSG00000168758 SEMA4C M-SEMA-F|SEMACL1|SEMAF|SEMAI semaphorin 4C protein-coding chr1-3140 chr1 61170469 61170679 + 11.0 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 82944 NR_104180 645030 Hs.632410 NR_104180 ENSG00000237853 NFIA-AS1 - NFIA antisense RNA 1 ncRNA chr7-1746 chr7 32957169 32957379 + 11.0 0.000 promoter-TSS (NM_001284341) promoter-TSS (NM_001284341) -130 NM_001284341 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr10-3449 chr10 48439112 48439322 + 11.0 0.000 non-coding (NR_136585, exon 12 of 12) non-coding (NR_136585, exon 12 of 12) 37605 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr6-4674 chr6 53129035 53129245 + 11.0 0.000 intron (NM_003643, intron 5 of 5) intron (NM_003643, intron 5 of 5) 19701 NM_003643 8521 Hs.23589 NM_003643 ENSG00000137270 GCM1 GCMA|hGCMa glial cells missing transcription factor 1 protein-coding chr10-1636 chr10 87750557 87750767 + 11.0 0.000 TTS (NM_001321969) TTS (NM_001321969) 67569 NM_001321969 84896 Hs.435948 NM_032810 ENSG00000138138 ATAD1 AFDC1|FNP001|HKPX4|THORASE ATPase family AAA domain containing 1 protein-coding chr1-3476 chr1 55718939 55719149 + 11.0 0.000 Intergenic Intergenic 225919 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chrX-2947 chrX 153947397 153947607 + 11.0 0.000 TTS (NM_005334) TTS (NM_005334) -2859 NM_002910 5973 Hs.158331 NM_002910 ENSG00000102032 RENBP RBP|RNBP renin binding protein protein-coding chr1-3114 chr1 40738876 40739086 + 11.0 0.000 intron (NM_001142589, intron 2 of 8) intron (NM_001142589, intron 2 of 8) 145 NM_001308114 4802 Hs.713051 NM_014223 ENSG00000066136 NFYC CBF-C|CBFC|H1TF2A|HAP5|HSM|NF-YC nuclear transcription factor Y subunit gamma protein-coding chr3-2714 chr3 76310865 76311075 + 11.0 0.000 Intergenic Intergenic -525421 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chrX-471 chrX 15270175 15270385 + 11.0 0.000 promoter-TSS (NM_001168530) promoter-TSS (NM_001168530) 187 NM_001168531 140462 Hs.19404 NM_024087 ENSG00000102048 ASB9 - ankyrin repeat and SOCS box containing 9 protein-coding chr12-5686 chr12 106051812 106052022 + 11.0 0.000 Intergenic Intergenic 88116 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr6-5816 chr6 17278286 17278496 + 11.0 0.000 Intergenic Intergenic -2970 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr17-4017 chr17 75613945 75614155 + 11.0 0.000 intron (NM_001309242, intron 28 of 62) intron (NM_001309242, intron 28 of 62) -19384 NM_001162995 643008 Hs.528605 NM_001162995 ENSG00000204323 SMIM5 C17orf109|PP12104 small integral membrane protein 5 protein-coding chr11-3896 chr11 111077992 111078202 + 11.0 0.000 Intergenic Intergenic 19221 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr1-6549 chr1 30816683 30816893 + 11.0 0.000 Intergenic MIRb|SINE|MIR -7864 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr1-15853 chr1 181453677 181453887 + 11.0 0.000 Intergenic Intergenic -29735 NM_000721 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr15-1432 chr15 67147098 67147308 + 11.0 0.000 intron (NM_001145103, intron 1 of 8) intron (NM_001145103, intron 1 of 8) 9182 NM_001145103 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr15-967 chr15 47820896 47821106 + 11.0 0.000 intron (NR_120336, intron 3 of 4) intron (NR_120336, intron 3 of 4) 25235 NR_120336 101928442 Hs.242804 NR_120336 ENSG00000259572 LINC01491 - long intergenic non-protein coding RNA 1491 ncRNA chr2-8609 chr2 141178418 141178628 + 11.0 0.000 intron (NM_018557, intron 7 of 90) MLT1J2-int|LTR|ERVL-MaLR -591838 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr6-2223 chr6 43926814 43927024 + 11.0 0.000 intron (NR_024478, intron 1 of 1) intron (NR_024478, intron 1 of 1) 35891 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr4-2171 chr4 100168641 100168851 + 11.0 0.000 Intergenic Intergenic -21287 NR_125924 101929353 Hs.147584 NR_125924 ENSG00000249710 LOC101929353 - uncharacterized LOC101929353 ncRNA chr12-3623 chr12 80648911 80649121 + 11.0 0.000 intron (NM_001145026, intron 36 of 44) intron (NM_001145026, intron 36 of 44) -58618 NM_002469 4618 Hs.35937 NM_002469 ENSG00000111046 MYF6 CNM3|MRF4|bHLHc4|myf-6 myogenic factor 6 protein-coding chrX-5228 chrX 136260931 136261141 + 11.0 0.000 Intergenic Intergenic -4554 NM_001173516 79649 Hs.446275 NM_024597 ENSG00000129680 MAP7D3 MDP3 MAP7 domain containing 3 protein-coding chr7-4982 chr7 152679580 152679790 + 11.0 0.000 Intergenic L1PREC2|LINE|L1 -3544 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr22-1731 chr22 20634235 20634445 + 11.0 0.000 Intergenic Intergenic -55215 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin like 4, pseudogene pseudo chr9-2849 chr9 127742562 127742772 + 11.0 0.000 intron (NM_001252334, intron 8 of 11) intron (NM_001252334, intron 8 of 11) -7373 NM_001134430 27433 Hs.444106 NM_130459 ENSG00000160404 TOR2A TORP1 torsin family 2 member A protein-coding chr8-1177 chr8 32925025 32925235 + 11.0 0.000 Intergenic Intergenic 203295 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr10-5486 chr10 80199972 80200182 + 11.0 0.000 intron (NM_001278408, intron 1 of 16) LTR83|LTR|ERVL 4414 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr6-2774 chr6 132391869 132392079 + 11.0 0.000 intron (NM_015529, intron 1 of 11) intron (NM_015529, intron 1 of 11) 9501 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr17-2292 chr17 40069294 40069504 + 11.0 0.000 intron (NM_199334, intron 1 of 8) intron (NM_199334, intron 1 of 8) 6434 NM_199334 7067 Hs.724 NM_003250 ENSG00000126351 THRA AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1 thyroid hormone receptor alpha protein-coding chr1-14196 chr1 34378185 34378395 + 11.0 0.000 Intergenic Intergenic 201383 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr17-3312 chr17 63761658 63761868 + 11.0 0.000 intron (NM_020198, intron 4 of 12) intron (NM_020198, intron 4 of 12) 11834 NM_020198 57003 Hs.202011 NM_020198 ENSG00000108588 CCDC47 GK001|MSTP041|THNS coiled-coil domain containing 47 protein-coding chr11-4484 chr11 110185047 110185257 + 11.0 0.000 intron (NM_001260493, intron 15 of 15) intron (NM_001260493, intron 15 of 15) 91760 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr20-1245 chr20 36219079 36219289 + 11.0 0.000 intron (NM_177996, intron 16 of 19) intron (NM_177996, intron 16 of 19) -17233 NM_015511 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr4-2646 chr4 176277631 176277841 + 11.0 0.000 Intergenic Intergenic -8514 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chrX-4772 chrX 96682462 96682672 + 11.0 0.000 Intergenic Intergenic -2096 NM_007309 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr8-6995 chr8 108527264 108527474 + 11.0 0.000 Intergenic Intergenic 83745 NM_014673 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr1-7830 chr1 65478806 65479016 + 11.0 0.000 intron (NM_001003679, intron 2 of 19) L1M6|LINE|L1 -46740 NM_001198687 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr10-6183 chr10 21165688 21165898 + 11.0 0.000 intron (NM_001173484, intron 2 of 6) intron (NM_001173484, intron 2 of 6) -8197 NR_046283 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA chr12-2495 chr12 79362474 79362684 + 11.0 0.000 intron (NM_001291901, intron 8 of 9) CR1_Mam|LINE|CR1 -56678 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr7-3269 chr7 14989119 14989329 + 11.0 0.000 Intergenic MER74C|LTR|ERVL -14366 NM_001350717 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr3-10234 chr3 122720161 122720371 + 11.0 0.000 exon (NM_017554, exon 15 of 17) exon (NM_017554, exon 15 of 17) 39427 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr7-2014 chr7 44131863 44132073 + 11.0 0.000 Intergenic Intergenic -8398 NM_006230 5425 Hs.306791 NM_006230 ENSG00000106628 POLD2 - DNA polymerase delta 2, accessory subunit protein-coding chr11-2534 chr11 77106309 77106519 + 11.0 0.000 intron (NM_004055, intron 3 of 12) intron (NM_004055, intron 3 of 12) 3574 NM_006189 4975 Hs.673853 NM_006189 ENSG00000254550 OMP - olfactory marker protein protein-coding chr5-2288 chr5 42985687 42985897 + 11.0 0.000 intron (NR_104643, intron 1 of 1) LTR26|LTR|ERV1 7541 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr12-4924 chr12 68237261 68237471 + 11.0 0.000 Intergenic L2b|LINE|L2 -11556 NM_018402 55801 Hs.272350 NM_018402 ENSG00000111536 IL26 AK155|IL-26 interleukin 26 protein-coding chr22-1468 chr22 50539735 50539945 + 11.0 0.000 Intergenic MER57F|LTR|ERV1 -6059 NM_138433 113730 Hs.137007 NM_138433 ENSG00000130487 KLHDC7B - kelch domain containing 7B protein-coding chr16-2017 chr16 3564381 3564591 + 11.0 0.000 exon (NM_178844, exon 5 of 20) exon (NM_178844, exon 5 of 20) 12917 NR_075083 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chr19-3113 chr19 12332558 12332768 + 11.0 0.000 intron (NM_145276, intron 1 of 3) MER83|LTR|ERV1 970 NM_001363608 147837 Hs.663510 NM_145276 ENSG00000188868 ZNF563 - zinc finger protein 563 protein-coding chr9-5052 chr9 32851817 32852027 + 11.0 0.000 Intergenic Intergenic 68382 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr16-2697 chr16 84192950 84193160 + 11.0 0.000 non-coding (NR_147175, exon 5 of 5) non-coding (NR_147175, exon 5 of 5) 1898 NM_001145400 161931 Hs.8977 NM_139174 ENSG00000140955 ADAD2 TENRL adenosine deaminase domain containing 2 protein-coding chr8-1595 chr8 142454820 142455030 + 11.0 0.000 intron (NM_001702, intron 1 of 30) intron (NM_001702, intron 1 of 30) 5276 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr7-6019 chr7 106289974 106290184 + 11.0 0.000 Intergenic Intergenic -5096 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr15-1845 chr15 49902857 49903067 + 11.0 0.000 intron (NR_073596, intron 20 of 27) intron (NR_073596, intron 20 of 27) 210417 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr9-8731 chr9 132478205 132478415 + 11.0 0.000 intron (NM_001282957, intron 1 of 5) MER77|LTR|ERVL 68099 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr2-11140 chr2 140899792 140900002 + 11.0 0.000 intron (NM_018557, intron 23 of 90) intron (NM_018557, intron 23 of 90) -313212 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2-11329 chr2 200893340 200893550 + 11.0 0.000 intron (NM_001369445, intron 3 of 6) intron (NM_001369445, intron 3 of 6) 1527 NM_001142356 60491 Hs.145284 NM_021824 ENSG00000196290 NIF3L1 ALS2CR1|CALS-7|MDS015 NGG1 interacting factor 3 like 1 protein-coding chr5-2646 chr5 932516 932726 + 11.0 0.000 Intergenic Intergenic 39737 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr17-7699 chr17 31843639 31843849 + 11.0 0.000 Intergenic Intergenic 15218 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr14-1162 chr14 51396854 51397064 + 11.0 0.000 intron (NR_146549, intron 1 of 3) intron (NR_146549, intron 1 of 3) 176 NR_146549 105370496 Hs.578228 NR_146549 ENSG00000258808 LINC02310 - long intergenic non-protein coding RNA 2310 ncRNA chr2-2884 chr2 210814347 210814557 + 11.0 0.000 Intergenic Intergenic 196881 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr1-13745 chr1 16068294 16068504 + 11.0 0.000 intron (NM_182623, intron 1 of 6) intron (NM_182623, intron 1 of 6) 5252 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr3-3611 chr3 86929163 86929373 + 11.0 0.000 Intergenic LTR33A_|LTR|ERVL 61881 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr8-608 chr8 18851395 18851605 + 11.0 0.000 intron (NM_015310, intron 4 of 15) AmnSINE2|SINE|tRNA-Deu 35557 NM_001362819 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr21-761 chr21 43608279 43608489 + 11.0 0.000 intron (NM_007031, intron 7 of 8) L1PA17|LINE|L1 1605 NR_106718 102464825 NR_106718 ENSG00000278433 MIR6070 hsa-mir-6070 microRNA 6070 ncRNA chr17-4874 chr17 66431544 66431754 + 11.0 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -14795 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chrX-477 chrX 53492058 53492268 + 11.0 0.000 Intergenic LTR41|LTR|ERVL -57787 NM_004493 3028 Hs.171280 NM_004493 ENSG00000072506 HSD17B10 17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|HSD10MD|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1 hydroxysteroid 17-beta dehydrogenase 10 protein-coding chr2-2592 chr2 240635380 240635590 + 11.0 0.000 Intergenic Intergenic 10240 NM_005301 2859 Hs.112218 NM_005301 ENSG00000178623 GPR35 - G protein-coupled receptor 35 protein-coding chr1-2246 chr1 179091607 179091817 + 11.0 0.000 intron (NM_022371, intron 4 of 5) intron (NM_022371, intron 4 of 5) 9642 NM_022371 64222 Hs.584957 NM_022371 ENSG00000186283 TOR3A ADIR|ADIR2 torsin family 3 member A protein-coding chr9-6937 chr9 97517193 97517403 + 11.0 0.000 intron (NM_003275, intron 1 of 9) AluJr|SINE|Alu 15632 NM_003275 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr12-2283 chr12 110501424 110501634 + 11.0 0.000 promoter-TSS (NM_001286535) promoter-TSS (NM_001286535) 582 NM_016226 51699 Hs.600114 NM_016226 ENSG00000111237 VPS29 DC15|DC7|PEP11 VPS29 retromer complex component protein-coding chr4-2593 chr4 120007686 120007896 + 11.0 0.000 Intergenic Intergenic 59057 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chrX-1853 chrX 111875148 111875358 + 11.0 0.000 promoter-TSS (NM_001195576) promoter-TSS (NM_001195576) -798 NM_001195576 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr21-920 chr21 33007878 33008088 + 11.0 0.000 Intergenic Intergenic -17952 NM_005806 10215 Hs.176977 NM_005806 ENSG00000205927 OLIG2 BHLHB1|OLIGO2|PRKCBP2|RACK17|bHLHe19 oligodendrocyte transcription factor 2 protein-coding chr18-749 chr18 69491275 69491485 + 11.0 0.000 intron (NM_152721, intron 1 of 7) intron (NM_152721, intron 1 of 7) 21449 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr6-2381 chr6 141726431 141726641 + 11.0 0.000 Intergenic LTR33A_|LTR|ERVL 362263 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr6-2490 chr6 87578486 87578696 + 11.0 0.000 intron (NR_146756, intron 1 of 19) intron (NR_146756, intron 1 of 19) 11396 NM_020320 57038 Hs.485910 NM_020320 ENSG00000146282 RARS2 ArgRS|DALRD2|PCH6|PRO1992|RARSL arginyl-tRNA synthetase 2, mitochondrial protein-coding chr11-5619 chr11 117991070 117991280 + 11.0 0.000 intron (NM_001558, intron 3 of 6) AluSx|SINE|Alu 4781 NR_026691 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding chrX-2630 chrX 109927493 109927703 + 11.0 0.000 Intergenic Intergenic 57197 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr15-1705 chr15 72970962 72971172 + 11.0 0.000 Intergenic Intergenic -81396 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr5-4537 chr5 16633559 16633769 + 11.0 0.000 Intergenic L1PA4|LINE|L1 -16606 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr10-2591 chr10 74005203 74005413 + 11.0 0.000 intron (NM_014000, intron 1 of 21) AluSx|SINE|Alu 7192 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr1-11025 chr1 221826951 221827161 + 11.0 0.000 TTS (NR_125989) TTS (NR_125989) 13610 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr6-3030 chr6 53294713 53294923 + 11.0 0.000 intron (NM_001242831, intron 2 of 2) L1ME4b|LINE|L1 17825 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr7-3299 chr7 43006933 43007143 + 11.0 0.000 Intergenic AluSx1|SINE|Alu 74662 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr3-3465 chr3 170035641 170035851 + 11.0 0.000 Intergenic Intergenic -2249 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr7-3087 chr7 2718964 2719174 + 11.0 0.000 intron (NM_001321766, intron 6 of 6) intron (NM_001321766, intron 6 of 6) 30867 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr2-4698 chr2 222912309 222912519 + 11.0 0.000 intron (NM_004457, intron 4 of 16) intron (NM_004457, intron 4 of 16) 51378 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr1-14065 chr1 29052344 29052554 + 11.0 0.000 intron (NM_001166007, intron 11 of 17) intron (NM_001166007, intron 11 of 17) 70052 NM_001171868 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr2-3702 chr2 218428006 218428216 + 11.0 0.000 intron (NM_007127, intron 5 of 19) intron (NM_007127, intron 5 of 19) 8988 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding chr14-1579 chr14 81366580 81366790 + 11.0 0.000 intron (NM_001366849, intron 5 of 8) intron (NM_001366849, intron 5 of 8) 61090 NM_001256430 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr5-1337 chr5 151223866 151224076 + 11.0 0.000 non-coding (NR_160730, exon 4 of 4) non-coding (NR_160730, exon 4 of 4) 121 NM_015621 26112 Hs.655336 NM_015621 ENSG00000198624 CCDC69 - coiled-coil domain containing 69 protein-coding chr13-1443 chr13 61942617 61942827 + 11.0 0.000 Intergenic SATR1|Satellite|Satellite 86826 NR_046995 100874143 Hs.552684 NR_046995 ENSG00000229578 LINC00358 - long intergenic non-protein coding RNA 358 ncRNA chr2-6816 chr2 59580197 59580407 + 11.0 0.000 Intergenic Intergenic 362594 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr5-4854 chr5 64147285 64147495 + 11.0 0.000 Intergenic Intergenic -18453 NM_178532 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr2-8073 chr2 74149148 74149358 + 11.0 0.000 TTS (NR_045637) TTS (NR_045637) 1272 NR_045637 100507171 Hs.503348 NR_045634 ENSG00000225439 BOLA3-AS1 - BOLA3 divergent transcript ncRNA chr1-4690 chr1 229272420 229272630 + 11.0 0.000 intron (NM_001271998, intron 1 of 5) intron (NM_001271998, intron 1 of 5) -1371 NR_149312 105373159 NR_149312 LOC105373159 - uncharacterized LOC105373159 ncRNA chr1-2669 chr1 184270587 184270797 + 11.0 0.000 Intergenic LTR16B1|LTR|ERVL -116337 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr13-1631 chr13 51947858 51948068 + 11.0 0.000 intron (NM_001005918, intron 8 of 16) intron (NM_001005918, intron 8 of 16) 63487 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chr18-1172 chr18 21439386 21439596 + 11.0 0.000 intron (NM_001142966, intron 7 of 32) intron (NM_001142966, intron 7 of 32) 161213 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding chr12-3959 chr12 9232764 9232974 + 11.0 0.000 intron (NR_040112, intron 2 of 8) intron (NR_040112, intron 2 of 8) 1338 NR_040112 3 Hs.569125 NR_040112 ENSG00000256069 A2MP1 A2MP alpha-2-macroglobulin pseudogene 1 pseudo chr7-5707 chr7 70177212 70177422 + 11.0 0.000 intron (NM_015570, intron 4 of 18) MIR|SINE|MIR 578842 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr9-1889 chr9 120308825 120309035 + 11.0 0.000 Intergenic L2|LINE|L2 -63880 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr17-2277 chr17 29115950 29116160 + 11.0 0.000 intron (NM_001346767, intron 11 of 39) intron (NM_001346767, intron 11 of 39) 24334 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr5-3673 chr5 168026310 168026520 + 11.0 0.000 intron (NM_001080428, intron 3 of 24) intron (NM_001080428, intron 3 of 24) -139430 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr4-2240 chr4 152736009 152736219 + 11.0 0.000 Intergenic AluJr|SINE|Alu 43616 NM_145720 201798 Hs.301243 NM_145720 ENSG00000169989 TIGD4 - tigger transposable element derived 4 protein-coding chr10-1305 chr10 69179975 69180185 + 11.0 0.000 promoter-TSS (NM_001301683) promoter-TSS (NM_001301683) -154 NM_001301683 6832 Hs.106469 NM_003171 ENSG00000156502 SUPV3L1 SUV3 Suv3 like RNA helicase protein-coding chr4-3287 chr4 140344664 140344874 + 11.0 0.000 intron (NM_032547, intron 2 of 4) intron (NM_032547, intron 2 of 4) 1308 NM_001153585 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr9-2259 chr9 94782553 94782763 + 11.0 0.000 intron (NM_001193331, intron 3 of 7) intron (NM_001193331, intron 3 of 7) 23009 NM_001193329 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr3-2617 chr3 183720382 183720592 + 11.0 0.000 intron (NM_001351371, intron 4 of 21) intron (NM_001351371, intron 4 of 21) 10248 NM_001351369 55689 Hs.632575 NM_018023 ENSG00000163872 YEATS2 - YEATS domain containing 2 protein-coding chr20-3059 chr20 4216115 4216325 + 11.0 0.000 Intergenic Intergenic 23130 NR_033917 728228 Hs.636379 NR_033917 ENSG00000230176 LINC01433 - long intergenic non-protein coding RNA 1433 ncRNA chr13-1801 chr13 31941123 31941333 + 11.0 0.000 intron (NR_027062, intron 1 of 3) intron (NR_027062, intron 1 of 3) 90411 NR_103839 100507099 Hs.536364 NR_103839 FRY-AS1 - FRY antisense RNA 1 ncRNA chr4-7541 chr4 76747823 76748033 + 11.0 0.000 intron (NM_020859, intron 5 of 10) MIRb|SINE|MIR 150216 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr2-6570 chr2 222619910 222620120 + 11.0 0.000 intron (NR_130154, intron 14 of 17) intron (NR_130154, intron 14 of 17) 36077 NM_005687 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chrX-827 chrX 103535495 103535705 + 11.0 0.000 intron (NR_131237, intron 4 of 5) AluJr|SINE|Alu -16111 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chr2-13967 chr2 188381151 188381361 + 11.0 0.000 intron (NR_045563, intron 2 of 12) intron (NR_045563, intron 2 of 12) 83764 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr2-5666 chr2 200454000 200454210 + 11.0 0.000 intron (NM_001100423, intron 8 of 12) intron (NM_001100423, intron 8 of 12) 55963 NM_001321547 130535 Hs.605775 NM_152387 ENSG00000155729 KCTD18 6530404F10Rik potassium channel tetramerization domain containing 18 protein-coding chr16-1021 chr16 87765922 87766132 + 11.0 0.000 promoter-TSS (NR_147833) promoter-TSS (NR_147833) -41 NR_147833 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr11-10631 chr11 125441625 125441835 + 11.0 0.000 Intergenic Intergenic -53484 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr17-7420 chr17 10175966 10176176 + 11.0 0.000 intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) 22535 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr8-4455 chr8 115489278 115489488 + 11.0 0.000 intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 178630 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr11-4119 chr11 37504972 37505182 + 11.0 0.000 Intergenic Intergenic -433524 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr1-7584 chr1 224052865 224053075 + 11.0 0.000 Intergenic Intergenic 60240 NR_136590 100287497 Hs.568390 NR_136590 LOC100287497 - septin 7 pseudogene pseudo chr7-7187 chr7 9444544 9444754 + 11.0 0.000 Intergenic Intergenic -189621 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr18-1107 chr18 68489292 68489502 + 11.0 0.000 Intergenic Intergenic 225711 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr16-3163 chr16 80167677 80167887 + 11.0 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) 372533 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr7-2685 chr7 18846746 18846956 + 11.0 0.000 intron (NM_058176, intron 20 of 22) intron (NM_058176, intron 20 of 22) 270785 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr10-6548 chr10 72017842 72018052 + 11.0 0.000 Intergenic Intergenic 53552 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr9-1580 chr9 77977221 77977431 + 11.0 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 54485 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr3-5169 chr3 61485513 61485723 + 11.0 0.000 Intergenic AluSz6|SINE|Alu -75953 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr9-2676 chr9 69671189 69671399 + 11.0 0.000 intron (NM_001163, intron 1 of 12) intron (NM_001163, intron 1 of 12) 1077 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr5-6120 chr5 31367030 31367240 + 11.0 0.000 Intergenic Intergenic 164958 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr1-9664 chr1 48229360 48229570 + 11.0 0.000 intron (NM_001135181, intron 5 of 14) intron (NM_001135181, intron 5 of 14) 6749 NM_001135181 200010 Hs.37890 NM_001011547 ENSG00000117834 SLC5A9 SGLT4 solute carrier family 5 member 9 protein-coding chr7-3723 chr7 66444001 66444211 + 11.0 0.000 Intergenic Intergenic -43698 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr4-1676 chr4 147755969 147756179 + 11.0 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) 23986 NM_024605 79658 Hs.368631 NM_024605 ENSG00000071205 ARHGAP10 GRAF2|PS-GAP|PSGAP Rho GTPase activating protein 10 protein-coding chr9-2283 chr9 128081104 128081314 + 11.0 0.000 intron (NM_001006641, intron 1 of 9) intron (NM_001006641, intron 1 of 9) -10255 NM_001006642 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr2-5797 chr2 229801107 229801317 + 11.0 0.000 intron (NM_001348330, intron 21 of 41) intron (NM_001348330, intron 21 of 41) -86657 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr1-6270 chr1 246753919 246754129 + 11.0 0.000 intron (NM_016002, intron 5 of 11) HERVIP10B3-int|LTR|ERV1 29615 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr6-1987 chr6 3905857 3906067 + 11.0 0.000 Intergenic Intergenic 56589 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr4-3757 chr4 86557041 86557251 + 11.0 0.000 Intergenic Intergenic -14594 NR_039657 100616463 NR_039657 ENSG00000266515 MIR4452 - microRNA 4452 ncRNA chr18-2020 chr18 43997618 43997828 + 11.0 0.000 Intergenic Intergenic 533974 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr5-6733 chr5 76300582 76300792 + 11.0 0.000 intron (NM_014979, intron 10 of 12) intron (NM_014979, intron 10 of 12) -102598 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr7-4745 chr7 68183774 68183984 + 11.0 0.000 Intergenic MER5A|DNA|hAT-Charlie 163626 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr19-4841 chr19 37953894 37954104 + 11.0 0.000 intron (NM_015073, intron 1 of 21) Charlie2b|DNA|hAT-Charlie 46791 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr2-2264 chr2 1110831 1111041 + 11.0 0.000 intron (NM_018968, intron 4 of 16) intron (NM_018968, intron 4 of 16) -159544 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr21-1714 chr21 32060111 32060321 + 11.0 0.000 Intergenic Intergenic 26079 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr11-4220 chr11 64046207 64046417 + 11.0 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -57578 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr6-6427 chr6 94784543 94784753 + 11.0 0.000 Intergenic L1PA7|LINE|L1 792803 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr2-5151 chr2 27255662 27255872 + 11.0 0.000 intron (NM_001318949, intron 8 of 8) MER94B|DNA|hAT-Blackjack 7280 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr7-3800 chr7 92410883 92411093 + 11.0 0.000 Intergenic FLAM_C|SINE|Alu 26326 NR_145992 105375396 NM_001317905 ENSG00000230927 TMBIM7P - transmembrane BAX inhibitor motif containing 7, pseudogene pseudo chr1-4937 chr1 46718723 46718933 + 11.0 0.000 5' UTR (NM_014774, exon 1 of 11) 5' UTR (NM_014774, exon 1 of 11) 286 NM_014774 9813 Hs.707688 NM_014774 ENSG00000159658 EFCAB14 KIAA0494 EF-hand calcium binding domain 14 protein-coding chr14-1649 chr14 105458364 105458574 + 11.0 0.000 intron (NM_001203258, intron 8 of 20) intron (NM_001203258, intron 8 of 20) -14476 NR_073082 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr7-2455 chr7 151205976 151206186 + 11.0 0.000 promoter-TSS (NM_001304419) promoter-TSS (NM_001304419) -585 NM_001304419 392843 Hs.649589 NM_001304419 ENSG00000278685 IQCA1L IQCA1P1 IQ motif containing with AAA domain 1 like protein-coding chr10-4921 chr10 23338895 23339105 + 11.0 0.000 intron (NM_153714, intron 1 of 4) ERVL-E-int|LTR|ERVL -4957 NR_155752 105376453 NR_155752 LOC105376453 - uncharacterized LOC105376453 ncRNA chr8-2186 chr8 118342673 118342883 + 11.0 0.000 intron (NM_001363274, intron 4 of 4) MER5A|DNA|hAT-Charlie -230959 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr6-3656 chr6 139679611 139679821 + 11.0 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -91357 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr9-8881 chr9 136236427 136236637 + 11.0 0.000 intron (NM_181701, intron 1 of 11) intron (NM_181701, intron 1 of 11) 9309 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr11-4282 chr11 66602811 66603021 + 11.0 0.000 intron (NM_005125, intron 5 of 7) intron (NM_005125, intron 5 of 7) 9731 NM_005125 9973 Hs.502917 NM_005125 ENSG00000173992 CCS - copper chaperone for superoxide dismutase protein-coding chr12-3987 chr12 20164636 20164846 + 11.0 0.000 Intergenic LTR86A1|LTR|ERVL -36840 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr8-2562 chr8 38404270 38404480 + 11.0 0.000 intron (NM_001199660, intron 7 of 10) intron (NM_001199660, intron 7 of 10) 17244 NM_001199660 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 SLC55A2 leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr8-6370 chr8 53391780 53391990 + 11.0 0.000 Intergenic L2b|LINE|L2 132080 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr20-1697 chr20 36036788 36036998 + 11.0 0.000 Intergenic Intergenic 14067 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr2-3898 chr2 45190540 45190750 + 11.0 0.000 intron (NR_033831, intron 3 of 5) intron (NR_033831, intron 3 of 5) 64296 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr15-1215 chr15 58924953 58925163 + 11.0 0.000 intron (NR_135043, intron 1 of 18) intron (NR_135043, intron 1 of 18) 8621 NR_135042 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr5-5925 chr5 65013463 65013673 + 11.0 0.000 intron (NM_005869, intron 13 of 13) intron (NM_005869, intron 13 of 13) 244638 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr5-1638 chr5 145936684 145936894 + 11.0 0.000 intron (NM_152550, intron 1 of 9) CpG 211 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr5-6704 chr5 66562367 66562577 + 11.0 0.000 Intergenic Intergenic -33921 NM_198828 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr20-1071 chr20 32636406 32636616 + 11.0 0.000 intron (NM_182584, intron 5 of 5) intron (NM_182584, intron 5 of 5) 37430 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr4-3866 chr4 134356425 134356635 + 11.0 0.000 Intergenic Intergenic -67338 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr14-1846 chr14 66076063 66076273 + 11.0 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -410203 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr6-974 chr6 110039600 110039810 + 11.0 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 61394 NM_005284 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr1-2762 chr1 84735569 84735779 + 11.0 0.000 Intergenic L2|LINE|L2 -45206 NM_001166295 117178 Hs.22587 NM_014021 ENSG00000117155 SSX2IP ADIP|hMsd1 SSX family member 2 interacting protein protein-coding chr19-2452 chr19 57559908 57560118 + 11.0 0.000 promoter-TSS (NM_001277092) promoter-TSS (NM_001277092) -150 NM_001277090 162972 Hs.180257 NM_153231 ENSG00000251369 ZNF550 - zinc finger protein 550 protein-coding chr7-2509 chr7 42726364 42726574 + 11.0 0.000 Intergenic Intergenic -20022 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr1-4999 chr1 63976083 63976293 + 11.0 0.000 intron (NM_005012, intron 1 of 8) MIR3|SINE|MIR 136017 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr2-14076 chr2 198693090 198693300 + 11.0 0.000 Intergenic Intergenic -318098 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr13-2061 chr13 52371752 52371962 + 11.0 0.000 Intergenic Intergenic 34315 NM_199263 55901 Hs.325667 NM_018676 ENSG00000136114 THSD1 TMTSP|UNQ3010 thrombospondin type 1 domain containing 1 protein-coding chr6-2502 chr6 127640613 127640823 + 11.0 0.000 Intergenic Intergenic 63544 NM_001010905 352999 Hs.226268 NM_001010905 ENSG00000184530 C6orf58 LEG1 chromosome 6 open reading frame 58 protein-coding chrX-4852 chrX 104271122 104271332 + 11.0 0.000 Intergenic Intergenic -16294 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr11-2562 chr11 105244455 105244665 + 11.0 0.000 Intergenic Intergenic -104791 NM_021571 59082 Hs.56279 NM_021571 ENSG00000255501 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family member 18 protein-coding chr11-2661 chr11 64079103 64079313 + 11.0 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -24682 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr6-2533 chr6 12545970 12546180 + 11.0 0.000 Intergenic Intergenic 39329 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chrX-384 chrX 50814006 50814216 + 11.0 0.000 promoter-TSS (NM_020717) promoter-TSS (NM_020717) -67 NR_027121 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding chr19-3529 chr19 42766195 42766405 + 11.0 0.000 promoter-TSS (NM_182707) promoter-TSS (NM_182707) -622 NM_182707 440533 Hs.466843 NM_182707 ENSG00000124467 PSG8 PSG1 pregnancy specific beta-1-glycoprotein 8 protein-coding chr16-4840 chr16 87742101 87742311 + 11.0 0.000 intron (NM_001351938, intron 4 of 10) intron (NM_001351938, intron 4 of 10) 23780 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr9-2347 chr9 77680039 77680249 + 11.0 0.000 Intergenic Intergenic -31822 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr10-2315 chr10 44911790 44912000 + 11.0 0.000 intron (NM_001345926, intron 1 of 3) MIRb|SINE|MIR 558 NM_001123376 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr14-2603 chr14 54470685 54470895 + 11.0 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR 18190 NM_004124 2764 Hs.151413 NM_004124 ENSG00000197045 GMFB GMF glia maturation factor beta protein-coding chr11-1509 chr11 66408920 66409130 + 11.0 0.000 Intergenic CpG -11979 NM_001318804 266743 Hs.256036 NM_178864 ENSG00000174576 NPAS4 Le-PAS|NXF|PASD10|bHLHe79 neuronal PAS domain protein 4 protein-coding chr18-1130 chr18 3595565 3595775 + 11.0 0.000 intron (NR_024101, intron 2 of 2) intron (NR_024101, intron 2 of 2) 1556 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914 DLGAP1 antisense RNA 1 ncRNA chr13-2336 chr13 33812554 33812764 + 11.0 0.000 Intergenic L2b|LINE|L2 -5410 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr10-3633 chr10 97249448 97249658 + 11.0 0.000 intron (NM_001204300, intron 5 of 10) L1MC5a|LINE|L1 21104 NM_001256423 84986 Hs.80305 NM_032900 ENSG00000213390 ARHGAP19 - Rho GTPase activating protein 19 protein-coding chr1-4884 chr1 34292608 34292818 + 11.0 0.000 Intergenic L2|LINE|L2 115806 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr15-1658 chr15 100873113 100873323 + 11.0 0.000 non-coding (NR_160707, exon 3 of 3) non-coding (NR_160707, exon 3 of 3) -6613 NM_001293815 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr4-7158 chr4 38888789 38888999 + 11.0 0.000 intron (NM_001350635, intron 2 of 8) intron (NM_001350635, intron 2 of 8) 20862 NR_030300 693159 NR_030300 ENSG00000207944 MIR574 MIR574-3p|MIRN574|hsa-mir-574|mir-574 microRNA 574 ncRNA chr6-1451 chr6 168032479 168032689 + 11.0 0.000 intron (NM_005355, intron 3 of 7) intron (NM_005355, intron 3 of 7) 14711 NM_005355 3834 Hs.150013 NM_005355 ENSG00000125337 KIF25 KNSL3 kinesin family member 25 protein-coding chr1-7288 chr1 240426450 240426660 + 11.0 0.000 intron (NM_020066, intron 15 of 17) L1MC5|LINE|L1 185600 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding GL000225.1-44 GL000225.1 19181 19391 + 11.0 0.000 NA NA NA NA chr1-12738 chr1 61074902 61075112 + 11.0 0.000 Intergenic Intergenic -2220 NM_001145511 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr8-2427 chr8 100075132 100075342 + 11.0 0.000 intron (NM_015668, intron 4 of 27) MSTB|LTR|ERVL-MaLR 30389 NM_001286693 26166 Hs.120021 NM_015668 ENSG00000132554 RGS22 CT145|PRTD-NY2 regulator of G protein signaling 22 protein-coding chr7-5288 chr7 23458313 23458523 + 11.0 0.000 intron (NM_006547, intron 2 of 14) intron (NM_006547, intron 2 of 14) 12073 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding chr13-1318 chr13 113516984 113517194 + 11.0 0.000 intron (NR_146222, intron 7 of 11) intron (NR_146222, intron 7 of 11) 26068 NM_017905 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr1-6039 chr1 78519489 78519699 + 11.0 0.000 intron (NM_001039585, intron 3 of 3) L2c|LINE|L2 28620 NM_000959 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr21-633 chr21 45202575 45202785 + 11.0 0.000 intron (NR_027674, intron 8 of 11) intron (NR_027674, intron 8 of 11) -31660 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr3-4316 chr3 171791053 171791263 + 11.0 0.000 intron (NM_002662, intron 1 of 26) intron (NM_002662, intron 1 of 26) 19325 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr18-907 chr18 58322157 58322367 + 11.0 0.000 intron (NM_001144965, intron 6 of 30) intron (NM_001144965, intron 6 of 30) 100691 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr6-2982 chr6 40951180 40951390 + 11.0 0.000 intron (NR_110873, intron 1 of 5) LTR103_Mam|LTR|ERV1? 71995 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr11-5601 chr11 113084307 113084517 + 11.0 0.000 intron (NM_181351, intron 1 of 18) MIR3|SINE|MIR -120952 NR_120563 101928847 Hs.711235 NR_120563 ENSG00000247416 LOC101928847 - uncharacterized LOC101928847 ncRNA chr11-6563 chr11 71269961 71270171 + 11.0 0.000 Intergenic Intergenic -45270 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr6-2385 chr6 142947600 142947810 + 11.0 0.000 Intergenic Intergenic -2529 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr5-3818 chr5 96877316 96877526 + 11.0 0.000 intron (NM_001329229, intron 1 of 17) intron (NM_001329229, intron 1 of 17) 1482 NM_001329233 64167 Hs.482910 NM_022350 ENSG00000164308 ERAP2 L-RAP|LRAP endoplasmic reticulum aminopeptidase 2 protein-coding chr9-2909 chr9 134151076 134151286 + 11.0 0.000 intron (NM_052821, intron 7 of 12) intron (NM_052821, intron 7 of 12) 11389 NM_052821 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr5-1348 chr5 7078932 7079142 + 11.0 0.000 Intergenic L2c|LINE|L2 190317 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr11-3190 chr11 64716594 64716804 + 11.0 0.000 intron (NM_015080, intron 1 of 22) intron (NM_015080, intron 1 of 22) 6489 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr6-1694 chr6 16901834 16902044 + 11.0 0.000 Intergenic Intergenic -140449 NM_001128164 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr12-1897 chr12 67434794 67435004 + 11.0 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 7660 NR_146500 102724433 NR_146500 ENSG00000256172 LINC02420 - long intergenic non-protein coding RNA 2420 ncRNA chr7-1586 chr7 105198182 105198392 + 11.0 0.000 intron (NM_182692, intron 3 of 15) intron (NM_182692, intron 3 of 15) 70790 NM_001350739 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr4-7412 chr4 65372625 65372835 + 11.0 0.000 intron (NM_182472, intron 8 of 16) intron (NM_182472, intron 8 of 16) 296758 NM_001318761 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr2-3981 chr2 74712370 74712580 + 11.0 0.000 Intergenic Intergenic 58228 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr3-3132 chr3 156024964 156025174 + 11.0 0.000 Intergenic L2c|LINE|L2 -95479 NM_001308217 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr10-9031 chr10 123318215 123318425 + 10.8 0.000 Intergenic L2c|LINE|L2 163918 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr4-3045 chr4 139383144 139383354 + 10.8 0.000 intron (NM_057175, intron 17 of 19) MIRb|SINE|MIR 70792 NR_159964 107984036 Hs.605782 NR_159963 LOC107984036 - uncharacterized LOC107984036 ncRNA chr19-5078 chr19 51687717 51687927 + 10.8 0.000 non-coding (NR_108100, exon 2 of 2) non-coding (NR_108100, exon 2 of 2) -1612 NM_001316994 147650 Hs.467174 NM_207324 ENSG00000182310 SPACA6 LET7EH|LINC00085|NCRNA00085|SPACA6P sperm acrosome associated 6 protein-coding chr6-2794 chr6 146412413 146412623 + 10.8 0.000 intron (NM_001278067, intron 7 of 7) intron (NM_001278067, intron 7 of 7) -131315 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr1-15018 chr1 92899286 92899496 + 10.8 0.000 intron (NM_001006605, intron 1 of 4) L1MA5|LINE|L1 -22241 NM_001252271 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr4-1434 chr4 83558909 83559119 + 10.8 0.000 intron (NM_001256421, intron 3 of 12) L3b|LINE|CR1 22906 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr13-1326 chr13 26498228 26498438 + 10.8 0.000 Intergenic Intergenic -59350 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr3-4350 chr3 184280477 184280687 + 10.8 0.000 intron (NM_014693, intron 7 of 18) AluSz|SINE|Alu 4560 NM_001037324 9718 Hs.146161 NM_001037324 ENSG00000145194 ECE2 EEF1AKMT4 endothelin converting enzyme 2 protein-coding chr9-5156 chr9 38541350 38541560 + 10.8 0.000 intron (NR_047651, intron 2 of 2) intron (NR_047651, intron 2 of 2) 3917 NR_047651 100289137 Hs.644630 NR_047651 ENSG00000283486 FAM95C - family with sequence similarity 95 member C ncRNA chr11-1567 chr11 95151491 95151701 + 10.8 0.000 non-coding (NR_110303, exon 1 of 3) non-coding (NR_110303, exon 1 of 3) 1057 NR_110303 101929295 Hs.735838 NR_110303 ENSG00000245552 LOC101929295 - uncharacterized LOC101929295 ncRNA chr11-6069 chr11 32750543 32750753 + 10.8 0.000 intron (NM_001008391, intron 2 of 17) L1MA3|LINE|L1 44010 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr11-7385 chr11 76195161 76195371 + 10.8 0.000 intron (NM_004626, intron 2 of 4) MLT1C|LTR|ERVL-MaLR 11236 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr2-7778 chr2 41034473 41034683 + 10.8 0.000 Intergenic L1M5|LINE|L1 -522143 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr8-1899 chr8 26466477 26466687 + 10.8 0.000 Intergenic Intergenic 47290 NM_007257 10687 Hs.591838 NM_007257 ENSG00000240694 PNMA2 MA2|MM2|RGAG2 PNMA family member 2 protein-coding chr8-2258 chr8 72233543 72233753 + 10.8 0.000 intron (NR_033867, intron 7 of 19) intron (NR_033867, intron 7 of 19) 17986 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo chr15-3459 chr15 92905302 92905512 + 10.8 0.000 TTS (NR_036136) TTS (NR_036136) 1008 NR_036136 100422995 NR_036136 ENSG00000284324 MIR3175 mir-3175 microRNA 3175 ncRNA chr12-2953 chr12 104523486 104523696 + 10.8 0.000 intron (NM_018413, intron 1 of 2) MIRc|SINE|MIR 66643 NM_001173982 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr19-1473 chr19 3537894 3538104 + 10.8 0.000 3' UTR (NM_016263, exon 14 of 14) 3' UTR (NM_016263, exon 14 of 14) -1158 NM_001135580 100128569 Hs.664978 NM_001135580 ENSG00000183397 C19orf71 - chromosome 19 open reading frame 71 protein-coding chr11-6733 chr11 82043406 82043616 + 10.8 0.000 intron (NR_120571, intron 5 of 7) LTR86A1|LTR|ERVL -152675 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr10-2638 chr10 89351799 89352009 + 10.8 0.000 Intergenic MER68-int|LTR|ERVL 19375 NM_001289759 3437 Hs.47338 NM_001549 ENSG00000119917 IFIT3 CIG-49|GARG-49|IFI60|IFIT4|IRG2|ISG60|P60|RIG-G|cig41 interferon induced protein with tetratricopeptide repeats 3 protein-coding chr17-2255 chr17 16363841 16364051 + 10.8 0.000 Intergenic Intergenic -10477 NM_181716 201161 Hs.433422 NM_181716 ENSG00000166582 CENPV 3110013H01Rik|CENP-V|PRR6|p30 centromere protein V protein-coding chr14-1295 chr14 105316037 105316247 + 10.8 0.000 promoter-TSS (NM_001242787) promoter-TSS (NM_001242787) -565 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr2-9415 chr2 232062342 232062552 + 10.8 0.000 intron (NR_046477, intron 5 of 18) intron (NR_046477, intron 5 of 18) 100734 NR_046476 129563 Hs.732236 NM_152383 ENSG00000144535 DIS3L2 FAM6A|PRLMNS|hDIS3L2 DIS3 like 3'-5' exoribonuclease 2 protein-coding chr2-12625 chr2 72583894 72584104 + 10.8 0.000 intron (NR_135774, intron 6 of 19) AluSz|SINE|Alu 242034 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr16-1930 chr16 819537 819747 + 10.8 0.000 Intergenic Intergenic 14199 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr17-4085 chr17 79735152 79735362 + 10.8 0.000 exon (NM_178543, exon 3 of 6) exon (NM_178543, exon 3 of 6) 4314 NM_178543 339221 Hs.114084 NM_178543 ENSG00000182156 ENPP7 ALK-SMase|E-NPP 7|NPP-7|NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 protein-coding chr2-4527 chr2 36696202 36696412 + 10.8 0.000 promoter-TSS (NM_001177970) promoter-TSS (NM_001177970) -383 NM_001177969 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr8-3185 chr8 104449575 104449785 + 10.8 0.000 intron (NM_001385, intron 2 of 9) MLT1C|LTR|ERVL-MaLR 17375 NM_001385 1807 Hs.443161 NM_001385 ENSG00000147647 DPYS DHP|DHPase dihydropyrimidinase protein-coding chr10-8323 chr10 78836774 78836984 + 10.8 0.000 Intergenic Intergenic 230569 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr2-5016 chr2 227472440 227472650 + 10.8 0.000 TTS (NR_049888) TTS (NR_049888) 373 NM_004504 3267 Hs.352962 NM_004504 ENSG00000173744 AGFG1 HRB|RAB|RIP ArfGAP with FG repeats 1 protein-coding chr14-3718 chr14 21736774 21736984 + 10.8 0.000 Intergenic Intergenic -65862 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr20-4208 chr20 46770132 46770342 + 10.8 0.000 Intergenic L2a|LINE|L2 60588 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATORS|ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr7-5384 chr7 32379132 32379342 + 10.8 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 48987 NM_001322059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr2-5921 chr2 17158501 17158711 + 10.8 0.000 Intergenic Intergenic 359834 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr7-2603 chr7 140283384 140283594 + 10.8 0.000 Intergenic Intergenic 106228 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr3-5573 chr3 6097251 6097461 + 10.8 0.000 Intergenic MIRc|SINE|MIR 708093 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr12-5398 chr12 121157336 121157546 + 10.8 0.000 intron (NR_033956, intron 3 of 10) intron (NR_033956, intron 3 of 10) 24565 NR_033948 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr15-3063 chr15 61811151 61811361 + 10.8 0.000 Intergenic MER57C2|LTR|ERV1 81338 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr14-2869 chr14 32635223 32635433 + 10.8 0.000 intron (NM_004274, intron 7 of 13) intron (NM_004274, intron 7 of 13) -303551 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr2-5104 chr2 18520503 18520713 + 10.8 0.000 Intergenic Intergenic 40045 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr4-2187 chr4 114659452 114659662 + 10.8 0.000 intron (NM_003360, intron 1 of 4) intron (NM_003360, intron 1 of 4) 2798 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chr2-6336 chr2 78278338 78278548 + 10.8 0.000 intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) 12288 NR_110288 101927967 Hs.406952 NR_110288 LOC101927967 - uncharacterized LOC101927967 ncRNA chr9-1162 chr9 33738096 33738306 + 10.8 0.000 intron (NR_109755, intron 1 of 1) intron (NR_109755, intron 1 of 1) 215 NR_109755 101929688 Hs.372465 NR_109755 ENSG00000233776 LINC01251 - long intergenic non-protein coding RNA 1251 ncRNA chr8-4685 chr8 139362285 139362495 + 10.8 0.000 Intergenic Intergenic 340733 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr20-4233 chr20 48339368 48339578 + 10.8 0.000 Intergenic Intergenic -20438 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr3-6202 chr3 61796232 61796442 + 10.8 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 234766 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr19-4076 chr19 12231866 12232076 + 10.8 0.000 Intergenic LTR5_Hs|LTR|ERVK 36956 NR_104179 100289333 Hs.662603 NR_104179 LOC100289333 - uncharacterized LOC100289333 ncRNA chr14-1207 chr14 75230641 75230851 + 10.8 0.000 Intergenic MIRb|SINE|MIR -48082 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr15-1603 chr15 78757105 78757315 + 10.8 0.000 Intergenic Intergenic 5173 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr5-2574 chr5 54534493 54534703 + 10.8 0.000 intron (NM_001145427, intron 1 of 1) intron (NM_001145427, intron 1 of 1) 16839 NM_001102575 112574 Hs.432755 NM_052870 ENSG00000178996 SNX18 SH3PX2|SH3PXD3B|SNAG1 sorting nexin 18 protein-coding chr3-6195 chr3 61503802 61504012 + 10.8 0.000 Intergenic L1PA10|LINE|L1 -57664 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr5-5531 chr5 145157810 145158020 + 10.8 0.000 Intergenic MIR|SINE|MIR 677427 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr9-1742 chr9 128204320 128204530 + 10.8 0.000 promoter-TSS (NM_001131015) promoter-TSS (NM_001131015) -203 NM_001131015 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr5-1144 chr5 142012853 142013063 + 10.8 0.000 promoter-TSS (NM_005471) promoter-TSS (NM_005471) 69 NM_005471 10007 Hs.633853 NM_005471 ENSG00000113552 GNPDA1 GNP1|GNPDA|GNPI|GPI|HLN glucosamine-6-phosphate deaminase 1 protein-coding chr17-3240 chr17 19418305 19418515 + 10.8 0.000 Intergenic Intergenic 7178 NM_007148 7732 Hs.189482 NM_007148 ENSG00000128482 RNF112 BFP|ZNF179 ring finger protein 112 protein-coding chr9-5625 chr9 119053004 119053214 + 10.8 0.000 Intergenic (TGTG)n|Simple_repeat|Simple_repeat 316326 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr10-5781 chr10 104453535 104453745 + 10.8 0.000 intron (NM_001008723, intron 17 of 17) intron (NM_001008723, intron 17 of 17) 26635 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr12-5514 chr12 131377293 131377503 + 10.8 0.000 Intergenic MSTA1|LTR|ERVL-MaLR 29928 NR_103736 338797 Hs.592007 NM_001025466 LINC02370 - long intergenic non-protein coding RNA 2370 ncRNA chr16-3309 chr16 90014391 90014601 + 10.8 0.000 intron (NM_001288708, intron 1 of 4) intron (NM_001288708, intron 1 of 4) -4375 NM_024043 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr18-1464 chr18 54240943 54241153 + 10.8 0.000 Intergenic MER52A|LTR|ERV1 -16379 NM_015832 8932 Hs.25674 NM_003927 ENSG00000134046 MBD2 DMTase|NY-CO-41 methyl-CpG binding domain protein 2 protein-coding chr10-3486 chr10 67838033 67838243 + 10.8 0.000 promoter-TSS (NM_201262) promoter-TSS (NM_201262) 41 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr15-3167 chr15 68618369 68618579 + 10.8 0.000 intron (NM_001190456, intron 1 of 11) L2b|LINE|L2 1934 NM_001190456 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr18-471 chr18 48336399 48336609 + 10.8 0.000 intron (NM_001371290, intron 5 of 9) MIR|SINE|MIR 39123 NM_001371291 chr12-8186 chr12 122457966 122458176 + 10.8 0.000 Intergenic AluSz|SINE|Alu -35402 NM_198240 6249 Hs.524809 NM_002956 ENSG00000130779 CLIP1 CLIP|CLIP-170|CLIP170|CYLN1|RSN CAP-Gly domain containing linker protein 1 protein-coding chrX-664 chrX 134631522 134631732 + 10.8 0.000 intron (NM_001316887, intron 2 of 3) intron (NM_001316887, intron 2 of 3) 26844 NM_021796 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr17-4651 chr17 17290133 17290343 + 10.8 0.000 Intergenic Intergenic -8935 NM_001316354 8533 Hs.6076 NM_003653 ENSG00000141030 COPS3 CSN3|SGN3 COP9 signalosome subunit 3 protein-coding chr16-6104 chr16 13110795 13111005 + 10.8 0.000 intron (NM_001145204, intron 2 of 4) intron (NM_001145204, intron 2 of 4) 209302 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr5-4433 chr5 1755543 1755753 + 10.8 0.000 Intergenic Intergenic 44189 NM_032479 64979 Hs.719465 NM_032479 ENSG00000171421 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding chr5-3186 chr5 76491791 76492001 + 10.8 0.000 intron (NM_006633, intron 2 of 35) intron (NM_006633, intron 2 of 35) -55513 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr11-3524 chr11 4637011 4637221 + 10.8 0.000 Intergenic Intergenic -2599 NM_001004751 390038 Hs.553728 NM_001004751 ENSG00000197428 OR51D1 OR11-14|OR51D1Q olfactory receptor family 51 subfamily D member 1 protein-coding chr17-5858 chr17 67806174 67806384 + 10.8 0.000 Intergenic AluSx|SINE|Alu -19224 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr19-1892 chr19 44500260 44500470 + 10.8 0.000 5' UTR (NM_001288762, exon 1 of 4) 5' UTR (NM_001288762, exon 1 of 4) 157 NM_001288761 7733 Hs.22305 NM_013256 ENSG00000167384 ZNF180 HHZ168 zinc finger protein 180 protein-coding chr5-3227 chr5 92019422 92019632 + 10.8 0.000 Intergenic MER44B|DNA|TcMar-Tigger -636210 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr3-4968 chr3 13018399 13018609 + 10.8 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -31403 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr12-5016 chr12 83150523 83150733 + 10.8 0.000 Intergenic Intergenic 463473 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr3-5213 chr3 78817711 78817921 + 10.8 0.000 intron (NM_002941, intron 4 of 30) intron (NM_002941, intron 4 of 30) 201643 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr6-8042 chr6 119929332 119929542 + 10.8 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -85742 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr6-6687 chr6 167919281 167919491 + 10.8 0.000 intron (NM_001207008, intron 19 of 31) MIR|SINE|MIR 57553 NM_001129895 100128124 Hs.448059 NM_001129895 HGC6.3 - uncharacterized LOC100128124 protein-coding chr5-9054 chr5 170368779 170368989 + 10.8 0.000 intron (NM_001034838, intron 1 of 7) intron (NM_001034838, intron 1 of 7) 15397 NM_001034838 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr13-833 chr13 54312880 54313090 + 10.8 0.000 promoter-TSS (NR_031628) promoter-TSS (NR_031628) -937 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr4-7609 chr4 82229279 82229489 + 10.8 0.000 Intergenic Intergenic 144607 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr7-3648 chr7 44065501 44065711 + 10.8 0.000 promoter-TSS (NM_000290) promoter-TSS (NM_000290) -39 NM_000290 5224 Hs.632642 NM_000290 ENSG00000164708 PGAM2 GSD10|PGAM-M|PGAMM phosphoglycerate mutase 2 protein-coding chr10-5773 chr10 104146796 104147006 + 10.8 0.000 intron (NM_025145, intron 29 of 37) MER89|LTR|ERV1 24730 NM_001002759 119392 Hs.93667 NM_145247 ENSG00000156384 SFR1 C10orf78|MEI5|MEIR5|bA373N18.1 SWI5 dependent homologous recombination repair protein 1 protein-coding chr15-1461 chr15 92849063 92849273 + 10.8 0.000 Intergenic AluSx1|SINE|Alu -33675 NR_037600 100507217 Hs.622504 NR_037600 LINC01578 - long intergenic non-protein coding RNA 1578 ncRNA chr2-4778 chr2 32096951 32097161 + 10.8 0.000 intron (NM_001363875, intron 3 of 15) intron (NM_001363875, intron 3 of 15) 33445 NM_199436 6683 Hs.468091 NM_014946 ENSG00000021574 SPAST ADPSP|FSP2|SPG4 spastin protein-coding chr3-2629 chr3 195160302 195160512 + 10.8 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 12536 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr17-4679 chr17 27296589 27296799 + 10.8 0.000 intron (NM_134265, intron 1 of 6) intron (NM_134265, intron 1 of 6) 2580 NM_015626 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding chr15-939 chr15 85815541 85815751 + 10.8 0.000 Intergenic AluSx1|SINE|Alu -9989 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr2-3794 chr2 19235528 19235738 + 10.8 0.000 Intergenic Intergenic -112796 NR_039914 100616307 NR_039914 ENSG00000266738 MIR4757 - microRNA 4757 ncRNA chr14-2880 chr14 34264705 34264915 + 10.8 0.000 Intergenic MIR|SINE|MIR 197430 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr7-3114 chr7 36147211 36147421 + 10.8 0.000 Intergenic Intergenic -5938 NM_030636 80820 Hs.487994 NM_030636 ENSG00000122547 EEPD1 HSPC107 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding chr12-6788 chr12 9748680 9748890 + 10.8 0.000 Intergenic Intergenic 12116 NM_001781 969 Hs.208854 NM_001781 ENSG00000110848 CD69 AIM|BL-AC/P26|CLEC2C|EA1|GP32/28|MLR-3 CD69 molecule protein-coding chr9-4591 chr9 96514177 96514387 + 10.8 0.000 TTS (NM_001351568) TTS (NM_001351568) 52549 NM_001351568 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr1-10842 chr1 204305884 204306094 + 10.8 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 53940 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr17-4631 chr17 9115581 9115791 + 10.8 0.000 intron (NM_004822, intron 2 of 6) CpG 63432 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chrX-556 chrX 22396519 22396729 + 10.8 0.000 intron (NR_073010, intron 4 of 11) intron (NR_073010, intron 4 of 11) 123711 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr8-3981 chr8 52766150 52766360 + 10.8 0.000 Intergenic LTR57|LTR|ERVL -51789 NM_001083617 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr2-5552 chr2 164538155 164538365 + 10.8 0.000 intron (NM_004490, intron 3 of 13) intron (NM_004490, intron 3 of 13) 30235 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr11-1707 chr11 73178083 73178293 + 10.8 0.000 Intergenic Intergenic -35870 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr6-4726 chr6 63581802 63582012 + 10.8 0.000 3' UTR (NM_003463, exon 6 of 6) 3' UTR (NM_003463, exon 6 of 6) 9895 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr1-4856 chr1 29317155 29317365 + 10.8 0.000 intron (NM_133177, intron 25 of 30) intron (NM_133177, intron 25 of 30) 32854 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr14-2082 chr14 71118339 71118549 + 10.8 0.000 Intergenic LTR26|LTR|ERV1 -202032 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr8-4214 chr8 86072653 86072863 + 10.8 0.000 Intergenic Intergenic -3090 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr6-1554 chr6 139539879 139540089 + 10.8 0.000 Intergenic Intergenic -65388 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr5-4918 chr5 73376718 73376928 + 10.8 0.000 Intergenic Intergenic 38917 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr10-4539 chr10 97886145 97886355 + 10.8 0.000 intron (NM_001206528, intron 11 of 14) intron (NM_001206528, intron 11 of 14) -10353 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr5-7006 chr5 154437405 154437615 + 10.8 0.000 intron (NR_037897, intron 2 of 2) L2a|LINE|L2 8312 NR_037897 386627 Hs.652021 NR_037897 SAP30L-AS1 GALNT10-AS1 SAP30L antisense RNA 1 (head to head) ncRNA chr4-4463 chr4 54902435 54902645 + 10.8 0.000 Intergenic Intergenic 223055 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr18-2183 chr18 60065706 60065916 + 10.8 0.000 Intergenic MER30|DNA|hAT-Charlie 165815 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr11-5210 chr11 13780053 13780263 + 10.8 0.000 Intergenic Intergenic -4228 NR_149108 105376562 Hs.577257 NR_149108 ENSG00000255411 LINC02548 - long intergenic non-protein coding RNA 2548 ncRNA chr4-2291 chr4 13627861 13628071 + 10.8 0.000 promoter-TSS (NM_148894) promoter-TSS (NM_148894) 101 NR_049814 100847023 NR_049814 ENSG00000266240 MIR5091 mir-5091 microRNA 5091 ncRNA chr6-2577 chr6 56727632 56727842 + 10.8 0.000 intron (NM_001144770, intron 3 of 94) intron (NM_001144770, intron 3 of 94) -84848 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chrX-1840 chrX 105468695 105468905 + 10.8 0.000 intron (NM_017416, intron 5 of 10) CR1-3_Croc|LINE|CR1 -248107 NM_031274 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr1-7018 chr1 170587545 170587755 + 10.8 0.000 Intergenic Intergenic -55041 NR_125958 101928650 Hs.676662 NR_125958 GORAB-AS1 - GORAB antisense RNA 1 ncRNA chr11-5487 chr11 78540150 78540360 + 10.8 0.000 intron (NR_120566, intron 1 of 3) intron (NR_120566, intron 1 of 3) 7079 NR_120566 101928896 Hs.659055 NR_120566 ENSG00000255084 LOC101928896 - uncharacterized LOC101928896 ncRNA chr4-1921 chr4 57163546 57163756 + 10.8 0.000 intron (NR_034081, intron 1 of 4) intron (NR_034081, intron 1 of 4) -53266 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr22-1254 chr22 21697083 21697293 + 10.8 0.000 TTS (NR_130910) TTS (NR_130910) 31176 NM_148175 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr10-2462 chr10 18651491 18651701 + 10.8 0.000 promoter-TSS (NM_001351117) promoter-TSS (NM_001351117) -9 NM_001351115 221078 Hs.396175 NM_182543 ENSG00000241058 NSUN6 4933414E04Rik|ARL5B-AS1|NOPD1 NOP2/Sun RNA methyltransferase 6 protein-coding chr11-3365 chr11 124145530 124145740 + 10.8 0.000 intron (NM_001130142, intron 18 of 18) intron (NM_001130142, intron 18 of 18) 30185 NM_001130142 4013 Hs.152944 NM_014622 ENSG00000110002 VWA5A BCSC-1|BCSC1|LOH11CR2A von Willebrand factor A domain containing 5A protein-coding chr12-5319 chr12 113501831 113502041 + 10.8 0.000 Intergenic Intergenic 29933 NR_126425 104355219 Hs.641707 NR_126425 LHX5-AS1 locus 4010|locus4010 LHX5 antisense RNA 1 ncRNA chr21-721 chr21 35149874 35150084 + 10.8 0.000 Intergenic Intergenic -100681 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr9-5188 chr9 71305003 71305213 + 10.8 0.000 intron (NM_001366143, intron 1 of 25) MIRb|SINE|MIR 141863 NM_001366143 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr7-9049 chr7 102967919 102968129 + 10.8 0.000 exon (NM_145032, exon 7 of 20) exon (NM_145032, exon 7 of 20) -5406 NM_001085386 58160 Hs.621233 NM_001085386 ENSG00000230257 NFE4 NF-E4 nuclear factor, erythroid 4 protein-coding chr15-1042 chr15 28104882 28105092 + 10.8 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -5672 NM_000275 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr9-4622 chr9 109611738 109611948 + 10.8 0.000 Intergenic Intergenic -28945 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr8-4242 chr8 90159524 90159734 + 10.8 0.000 Intergenic Intergenic -61859 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chrX-1233 chrX 86021648 86021858 + 10.8 0.000 intron (NM_001320959, intron 2 of 14) L1MB2|LINE|L1 25553 NM_001362518 1121 Hs.496449 NM_000390 ENSG00000188419 CHM DXS540|GGTA|HSD-32|REP-1|TCD CHM Rab escort protein protein-coding chr17-2358 chr17 68291957 68292167 + 10.8 0.000 promoter-TSS (NM_001352901) intron (NM_001352899, intron 1 of 12) -73 NM_001352902 22901 Hs.437249 NM_014960 ENSG00000141337 ARSG USH4 arylsulfatase G protein-coding chr6-3393 chr6 60567551 60567761 + 10.8 0.000 Intergenic Intergenic -1006474 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr6-3162 chr6 116950936 116951146 + 10.8 0.000 Intergenic Intergenic 73799 NM_173560 222546 Hs.352276 NM_173560 ENSG00000185002 RFX6 MTCHRS|MTFS|RFXDC1|dJ955L16.1 regulatory factor X6 protein-coding chr6-3085 chr6 82553798 82554008 + 10.8 0.000 Intergenic MIRb|SINE|MIR 189659 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chrX-674 chrX 11423343 11423553 + 10.8 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) 4370 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr12-2627 chr12 127226774 127226984 + 10.8 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 57404 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr1-10078 chr1 94101411 94101621 + 10.8 0.000 intron (NM_000350, intron 5 of 49) intron (NM_000350, intron 5 of 49) 19632 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr2-9441 chr2 233764242 233764452 + 10.8 0.000 intron (NM_000463, intron 1 of 4) intron (NM_000463, intron 1 of 4) 4074 NM_000463 54658 Hs.554822 NM_000463 ENSG00000241635 UGT1A1 BILIQTL1|GNT1|HUG-BR1|UDPGT|UDPGT 1-1|UGT1|UGT1A UDP glucuronosyltransferase family 1 member A1 protein-coding chr9-5358 chr9 90166933 90167143 + 10.8 0.000 Intergenic LTR5B|LTR|ERVK -125539 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr3-5762 chr3 22670217 22670427 + 10.8 0.000 Intergenic Intergenic 532256 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr22-2115 chr22 30928875 30929085 + 10.8 0.000 intron (NM_001303257, intron 24 of 25) Charlie15b|DNA|hAT-Charlie 6672 NR_026920 150291 Hs.592202 NM_153044 ENSG00000235989 MORC2-AS1 C22orf27|NCRNA00325 MORC2 antisense RNA 1 ncRNA chr11-3423 chr11 35623726 35623936 + 10.8 0.000 Intergenic Intergenic 5371 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr4-3971 chr4 186568825 186569035 + 10.8 0.000 Intergenic Intergenic -13363 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr6-4685 chr6 54164920 54165130 + 10.8 0.000 intron (NM_001281746, intron 8 of 11) L1ME1|LINE|L1 53582 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr8-3194 chr8 115649318 115649528 + 10.8 0.000 intron (NM_014112, intron 1 of 6) MIR|SINE|MIR 18590 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8-2217 chr8 19483613 19483823 + 10.8 0.000 intron (NM_001130518, intron 4 of 9) intron (NM_001130518, intron 4 of 9) 118827 NM_001354494 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr12-4127 chr12 67751699 67751909 + 10.8 0.000 Intergenic Intergenic -22329 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr3-5180 chr3 67672364 67672574 + 10.8 0.000 intron (NR_109992, intron 3 of 6) LTR16C|LTR|ERVL 17772 NR_109993 101927111 Hs.518057 NR_109992 ENSG00000241316 SUCLG2-AS1 - SUCLG2 antisense RNA 1 (head to head) ncRNA chr2-4491 chr2 6895542 6895752 + 10.8 0.000 intron (NM_080657, intron 5 of 5) intron (NM_080657, intron 5 of 5) 17870 NM_080657 91543 Hs.17518 NM_080657 ENSG00000134321 RSAD2 2510004L01Rik|cig33|cig5|vig1 radical S-adenosyl methionine domain containing 2 protein-coding chr16-4222 chr16 14045154 14045364 + 10.8 0.000 Intergenic Intergenic -24182 NR_110915 101927348 Hs.569621 NR_110915 ENSG00000261856 LINC02186 - long intergenic non-protein coding RNA 2186 ncRNA chr17-6717 chr17 80653599 80653809 + 10.8 0.000 intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 108866 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr3-4311 chr3 168071454 168071664 + 10.8 0.000 intron (NM_001308155, intron 1 of 14) intron (NM_001308155, intron 1 of 14) 24365 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr2-6296 chr2 61062828 61063038 + 10.8 0.000 Intergenic Intergenic -2937 NM_001330434 84542 Hs.468653 NM_032506 ENSG00000162929 KIAA1841 - KIAA1841 protein-coding chr9-2655 chr9 35285907 35286117 + 10.8 0.000 intron (NM_006377, intron 7 of 38) intron (NM_006377, intron 7 of 38) -55884 NM_001371187 chr3-5168 chr3 61236627 61236837 + 10.8 0.000 intron (NM_001320900, intron 1 of 9) intron (NM_001320900, intron 1 of 9) 14720 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr10-3644 chr10 98446334 98446544 + 10.8 0.000 non-coding (NR_134454, exon 1 of 3) non-coding (NR_134454, exon 1 of 3) 118 NR_134454 101927278 Hs.434883 NR_134451 LOC101927278 - uncharacterized LOC101927278 ncRNA chr2-4571 chr2 84058755 84058965 + 10.8 0.000 Intergenic L2a|LINE|L2 -231822 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr10-5639 chr10 96779897 96780107 + 10.8 0.000 Intergenic AluSq2|SINE|Alu 29736 NR_026712 728658 Hs.645344 NR_026712 ENSG00000236552 RPL13AP5 RPL13A_8_1086|bA196N24.2 ribosomal protein L13a pseudogene 5 pseudo chr4-741 chr4 88612222 88612432 + 10.8 0.000 intron (NM_001318505, intron 3 of 8) (TG)n|Simple_repeat|Simple_repeat 19847 NM_001318505 8916 Hs.35804 NM_014606 ENSG00000138641 HERC3 - HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein-coding chr12-7113 chr12 46044187 46044397 + 10.8 0.000 Intergenic L1M4|LINE|L1 -53718 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr16-2903 chr16 1007055 1007265 + 10.8 0.000 Intergenic Intergenic 25390 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr6-3825 chr6 36605938 36606148 + 10.8 0.000 TTS (NM_003017) TTS (NM_003017) 11681 NM_003017 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr7-3781 chr7 84686460 84686670 + 10.8 0.000 Intergenic Intergenic 154089 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr2-5774 chr2 223688271 223688481 + 10.8 0.000 Intergenic Intergenic -86015 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr2-7460 chr2 14604535 14604745 + 10.8 0.000 Intergenic Intergenic -28077 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr2-5362 chr2 96424072 96424282 + 10.8 0.000 Intergenic MER31-int|LTR|ERV1 81180 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr2-4898 chr2 133477346 133477556 + 10.8 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 91012 NM_207363 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr6-3930 chr6 82482188 82482398 + 10.8 0.000 Intergenic LTR79|LTR|ERVL 118049 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr12-1480 chr12 12837137 12837347 + 10.8 0.000 Intergenic Intergenic 23896 NM_201224 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr11-3916 chr11 120667793 120668003 + 10.8 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 103462 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chrX-570 chrX 53287558 53287768 + 10.8 0.000 intron (NM_001111125, intron 2 of 14) intron (NM_001111125, intron 2 of 14) -6079 NM_015075 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr2-7697 chr2 31477168 31477378 + 10.8 0.000 Intergenic Intergenic -62531 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr9-3174 chr9 124367625 124367835 + 10.8 0.000 intron (NM_002799, intron 6 of 7) MIRb|SINE|MIR 14257 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr11-2373 chr11 131977437 131977647 + 10.8 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 66724 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr12-5377 chr12 120043675 120043885 + 10.8 0.000 intron (NR_147894, intron 3 of 8) intron (NR_147894, intron 3 of 8) 53936 NR_147893 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chr4-1960 chr4 136665156 136665366 + 10.8 0.000 Intergenic L1M4c|LINE|L1 -528495 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr8-4696 chr8 140258517 140258727 + 10.8 0.000 intron (NM_001160372, intron 15 of 22) intron (NM_001160372, intron 15 of 22) -158087 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr4-2267 chr4 176050592 176050802 + 10.8 0.000 Intergenic Intergenic -15144 NM_001350727 116966 Hs.532056 NM_170710 ENSG00000150627 WDR17 - WD repeat domain 17 protein-coding chr18-748 chr18 69224562 69224772 + 10.8 0.000 Intergenic Intergenic -176221 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr7-2422 chr7 94431458 94431668 + 10.8 0.000 TTS (NM_000089) TTS (NM_000089) 37002 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr2-4257 chr2 224731491 224731701 + 10.8 0.000 Intergenic Intergenic -146199 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr11-3257 chr11 74330545 74330755 + 10.8 0.000 3' UTR (NM_173582, exon 14 of 14) 3' UTR (NM_173582, exon 14 of 14) -19010 NM_001288748 283208 Hs.660541 NM_182904 ENSG00000149380 P4HA3 - prolyl 4-hydroxylase subunit alpha 3 protein-coding chr20-1756 chr20 49747855 49748065 + 10.8 0.000 Intergenic Intergenic -34082 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr9-6021 chr9 135631155 135631365 + 10.8 0.000 intron (NM_182974, intron 3 of 4) intron (NM_182974, intron 3 of 4) 8280 NM_182974 360203 Hs.522491 NM_182974 ENSG00000204007 GLT6D1 GLTDC1|GT6M7 glycosyltransferase 6 domain containing 1 protein-coding chr1-8345 chr1 56446384 56446594 + 10.8 0.000 Intergenic MIRb|SINE|MIR 31526 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr4-2017 chr4 2485288 2485498 + 10.8 0.000 intron (NM_001185009, intron 2 of 8) intron (NM_001185009, intron 2 of 8) 15940 NM_001185009 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr21-680 chr21 15194192 15194402 + 10.8 0.000 Intergenic Intergenic -129297 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr1-10919 chr1 209504974 209505184 + 10.8 0.000 Intergenic Intergenic 72946 NR_029622 406988 NR_029622 ENSG00000284485 MIR205 MIRN205|mir-205 microRNA 205 ncRNA chrX-5285 chrX 140927708 140927918 + 10.8 0.000 Intergenic Intergenic -1582 NR_031725 100302169 NR_031725 ENSG00000221081 MIR320D2 MIR320D-2|MIRN320D2|hsa-mir-320d-2|mir-320d-2 microRNA 320d-2 ncRNA chr18-2261 chr18 73510843 73511053 + 10.8 0.000 Intergenic L1MCb|LINE|L1 186007 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr4-3729 chr4 76354692 76354902 + 10.8 0.000 intron (NM_001042784, intron 14 of 23) Tigger9b|DNA|TcMar-Tigger 48771 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding chr9-5139 chr9 37609575 37609785 + 10.8 0.000 intron (NM_001371225, intron 1 of 15) L2a|LINE|L2 6451 NM_001371225 chr7-3844 chr7 100920208 100920418 + 10.8 0.000 Intergenic L1MCc|LINE|L1 -23319 NM_001367919 43 Hs.154495 NM_000665 ENSG00000087085 ACHE ACEE|ARACHE|N-ACHE|YT acetylcholinesterase (Cartwright blood group) protein-coding chr12-5244 chr12 108814731 108814941 + 10.8 0.000 intron (NM_018984, intron 5 of 14) intron (NM_018984, intron 5 of 14) 12715 NM_001161331 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr14-1562 chr14 71103969 71104179 + 10.8 0.000 intron (NM_014982, intron 32 of 35) intron (NM_014982, intron 32 of 35) 196615 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr17-2734 chr17 76161462 76161672 + 10.8 0.000 exon (NM_001330501, exon 11 of 18) exon (NM_001330501, exon 11 of 18) -20322 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr12-7914 chr12 108383450 108383660 + 10.8 0.000 Intergenic Intergenic -44244 NM_004072 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chrX-1346 chrX 136780962 136781172 + 10.8 0.000 promoter-TSS (NM_004840) promoter-TSS (NM_004840) -135 NM_004840 9459 Hs.522795 NM_004840 ENSG00000129675 ARHGEF6 COOL2|Cool-2|MRX46|PIXA|alpha-PIX|alphaPIX Rac/Cdc42 guanine nucleotide exchange factor 6 protein-coding chr4-6796 chr4 7570156 7570366 + 10.8 0.000 intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) 110233 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr6-5110 chr6 119994910 119995120 + 10.8 0.000 Intergenic L1ME3G|LINE|L1 -20164 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr4-4489 chr4 57342440 57342650 + 10.8 0.000 Intergenic Intergenic -83327 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr20-2205 chr20 57323082 57323292 + 10.8 0.000 Intergenic Intergenic -1596 NR_036219 100422883 NR_036219 ENSG00000266666 MIR4325 - microRNA 4325 ncRNA chr2-13048 chr2 109255202 109255412 + 10.8 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 58318 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr17-2993 chr17 72121513 72121723 + 10.8 0.000 promoter-TSS (NR_103737) promoter-TSS (NR_103737) 598 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box transcription factor 9 protein-coding chr4-3246 chr4 81950134 81950344 + 10.8 0.000 Intergenic MER5A1|DNA|hAT-Charlie 423752 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr8-2109 chr8 141545062 141545272 + 10.8 0.000 Intergenic Intergenic -37937 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr16-2713 chr16 87405135 87405345 + 10.8 0.000 TTS (NM_022818) TTS (NM_022818) 12904 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr13-1055 chr13 114164770 114164980 + 10.8 0.000 Intergenic MIR|SINE|MIR -32252 NM_007368 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr20-1695 chr20 35575788 35575998 + 10.8 0.000 intron (NR_119376, intron 35 of 42) intron (NR_119376, intron 35 of 42) 31669 NR_119376 80307 Hs.72222 NR_001442 ENSG00000088340 FER1L4 C20orf124 fer-1 like family member 4 (pseudogene) pseudo GL000225.1-43 GL000225.1 74753 74963 + 10.8 0.000 NA NA NA NA chr17-2924 chr17 47276860 47277070 + 10.8 0.000 intron (NM_000212, intron 2 of 14) intron (NM_000212, intron 2 of 14) 23123 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chr7-5900 chr7 95776369 95776579 + 10.8 0.000 intron (NM_004411, intron 1 of 16) intron (NM_004411, intron 1 of 16) 3968 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr11-6048 chr11 30282335 30282545 + 10.8 0.000 Intergenic L1PA16|LINE|L1 -40664 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr7-4633 chr7 29021837 29022047 + 10.8 0.000 intron (NM_001371256, intron 16 of 16) L1MA4|LINE|L1 41975 NR_038965 100506497 Hs.586328 NR_038965 ENSG00000272568 LOC100506497 - uncharacterized LOC100506497 ncRNA chr11-2828 chr11 129750708 129750918 + 10.8 0.000 Intergenic Intergenic -64968 NM_001331211 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr14-1590 chr14 90648911 90649121 + 10.8 0.000 TTS (NR_110134) TTS (NR_110134) 6387 NR_110134 101928909 Hs.662545 NR_110134 ENSG00000259163 LOC101928909 - uncharacterized LOC101928909 ncRNA chr11-3769 chr11 48179410 48179620 + 10.8 0.000 Intergenic Intergenic -37295 NM_001005470 119765 Hs.553566 NM_001005470 ENSG00000175619 OR4B1 OR11-106|OST208 olfactory receptor family 4 subfamily B member 1 protein-coding chr17-5078 chr17 4034101 4034311 + 10.8 0.000 exon (NM_015113, exon 40 of 55) exon (NM_015113, exon 40 of 55) 57103 NR_146884 105371496 Hs.579239 NR_146884 LINC01975 - long intergenic non-protein coding RNA 1975 ncRNA chr8-1611 chr8 144005196 144005406 + 10.8 0.000 Intergenic Intergenic -6979 NM_198572 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr14-879 chr14 99756337 99756547 + 10.8 0.000 Intergenic Intergenic -36971 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr4-2196 chr4 122765787 122765997 + 10.8 0.000 Intergenic AluSz6|SINE|Alu 33188 NM_152618 166379 Hs.400698 NM_152618 ENSG00000181004 BBS12 C4orf24 Bardet-Biedl syndrome 12 protein-coding chr3-7274 chr3 197310068 197310278 + 10.8 0.000 Intergenic Intergenic -10852 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr3-4781 chr3 117298872 117299082 + 10.8 0.000 Intergenic Intergenic 377546 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr7-2512 chr7 43659331 43659541 + 10.8 0.000 intron (NM_001371308, intron 1 of 7) intron (NM_001371308, intron 1 of 7) 70087 NM_001371307 chrX-3765 chrX 130144498 130144708 + 10.8 0.000 intron (NR_132647, intron 5 of 15) L2c|LINE|L2 -6563 NM_001130846 9131 Hs.424932 NM_004208 ENSG00000156709 AIFM1 AIF|CMT2D|CMTX4|COWCK|COXPD6|DFNX5|NADMR|NAMSD|PDCD8 apoptosis inducing factor mitochondria associated 1 protein-coding chr1-13571 chr1 8040715 8040925 + 10.8 0.000 Intergenic LTR16A|LTR|ERVL -14511 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr19-3008 chr19 46487777 46487987 + 10.8 0.000 intron (NM_001205281, intron 3 of 3) MER5A|DNA|hAT-Charlie 7985 NM_020709 57469 Hs.7193 NM_020709 ENSG00000204851 PNMA8B PNMAL2 PNMA family member 8B protein-coding chr10-3150 chr10 69751735 69751945 + 10.8 0.000 Intergenic Intergenic -50066 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr14-2070 chr14 68875463 68875673 + 10.8 0.000 intron (NM_001102, intron 20 of 20) intron (NM_001102, intron 20 of 20) -79325 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr10-2068 chr10 100715851 100716061 + 10.8 0.000 Intergenic Intergenic -19440 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr18-2866 chr18 9229954 9230164 + 10.8 0.000 intron (NM_001204056, intron 7 of 11) L1MA4A|LINE|L1 92496 NM_001204056 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding chr3-1325 chr3 52313632 52313842 + 10.8 0.000 Intergenic Intergenic -2582 NM_015512 25981 Hs.655469 NM_015512 ENSG00000114841 DNAH1 CILD37|DNAHC1|HDHC7|HL-11|HL11|HSRF-1|SPGF18|XLHSRF-1 dynein axonemal heavy chain 1 protein-coding chr6-2379 chr6 140979684 140979894 + 10.8 0.000 Intergenic Intergenic 295975 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr17-4706 chr17 30108663 30108873 + 10.8 0.000 TTS (NM_198529) TTS (NM_198529) -8039 NM_001261467 84081 Hs.462663 NM_032141 ENSG00000126653 NSRP1 CCDC55|HSPC095|NSrp70 nuclear speckle splicing regulatory protein 1 protein-coding chr8-748 chr8 47188611 47188821 + 10.8 0.000 promoter-TSS (NR_037168) promoter-TSS (NR_037168) -591 NR_037168 100287846 Hs.21550 NR_037168 LOC100287846 - uncharacterized LOC100287846 ncRNA chr20-2676 chr20 45568417 45568627 + 10.8 0.000 intron (NM_130896, intron 1 of 5) intron (NM_130896, intron 1 of 5) 10762 NM_130896 90199 Hs.116128 NM_130896 ENSG00000158901 WFDC8 C20orf170|HEL-S-292|WAP8|dJ461P17.1 WAP four-disulfide core domain 8 protein-coding chr5-4105 chr5 73517167 73517377 + 10.8 0.000 Intergenic Intergenic 18847 NM_001037637 689 Hs.591768 NM_001207 ENSG00000145741 BTF3 BETA-NAC|BTF3a|BTF3b|NACB basic transcription factor 3 protein-coding chr19-3036 chr19 737871 738081 + 10.8 0.000 intron (NM_001040134, intron 7 of 7) L2a|LINE|L2 -13136 NM_173481 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr3-6524 chr3 115885262 115885472 + 10.8 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) 19759 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr9-2764 chr9 107368075 107368285 + 10.8 0.000 Intergenic Intergenic 83411 NM_001244713 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr2-4470 chr2 237581960 237582170 + 10.8 0.000 intron (NM_022449, intron 2 of 5) intron (NM_022449, intron 2 of 5) 8669 NR_033308 64284 Hs.44278 NM_022449 ENSG00000124839 RAB17 - RAB17, member RAS oncogene family protein-coding chr5-4093 chr5 67204421 67204631 + 10.8 0.000 Intergenic Intergenic -7727 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr8-1486 chr8 38937692 38937902 + 10.8 0.000 intron (NM_021623, intron 3 of 11) intron (NM_021623, intron 3 of 11) -36431 NM_153692 203100 Hs.661014 NM_153692 ENSG00000169495 HTRA4 - HtrA serine peptidase 4 protein-coding chr15-3544 chr15 101329365 101329575 + 10.8 0.000 intron (NM_138319, intron 14 of 20) intron (NM_138319, intron 14 of 20) -4967 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr17-3698 chr17 17075882 17076092 + 10.8 0.000 intron (NM_201274, intron 2 of 23) intron (NM_201274, intron 2 of 23) 33227 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr11-7212 chr11 134369773 134369983 + 10.8 0.000 exon (NM_138342, exon 11 of 20) exon (NM_138342, exon 11 of 20) 37890 NM_001370462 89944 Hs.436178 NM_138342 ENSG00000149328 GLB1L2 MST114|MSTP114 galactosidase beta 1 like 2 protein-coding chr7-3063 chr7 144892175 144892385 + 10.8 0.000 Intergenic Intergenic -56227 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr11-2440 chr11 33870226 33870436 + 10.8 0.000 promoter-TSS (NM_001142316) promoter-TSS (NM_001142316) -453 NM_001142315 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr7-5294 chr7 24557610 24557820 + 10.8 0.000 Intergenic Intergenic -15737 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr11-9200 chr11 37298914 37299124 + 10.8 0.000 Intergenic AluSz6|SINE|Alu -639582 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr21-1795 chr21 38584540 38584750 + 10.8 0.000 intron (NM_001243432, intron 2 of 11) intron (NM_001243432, intron 2 of 11) 300 NM_001243429 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr6-3404 chr6 77856841 77857051 + 10.8 0.000 intron (NM_001282136, intron 4 of 4) intron (NM_001282136, intron 4 of 4) 203907 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr13-2043 chr13 49022556 49022766 + 10.8 0.000 intron (NM_001079673, intron 2 of 25) intron (NM_001079673, intron 2 of 25) 45999 NR_103528 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr6-8436 chr6 152529538 152529748 + 10.8 0.000 intron (NM_182961, intron 4 of 145) MER77|LTR|ERVL 107208 NM_033071 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr6-4288 chr6 13508665 13508875 + 10.8 0.000 Intergenic L1ME3A|LINE|L1 -21133 NM_001242629 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr2-8523 chr2 129967580 129967790 + 10.8 0.000 non-coding (NR_036537, exon 6 of 6) non-coding (NR_036537, exon 6 of 6) -11981 NM_032144 84084 Hs.591552 NM_032144 ENSG00000222014 RAB6C WTH3 RAB6C, member RAS oncogene family protein-coding chr20-1777 chr20 54549863 54550073 + 10.8 0.000 intron (NM_018431, intron 1 of 7) intron (NM_018431, intron 1 of 7) 74375 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr2-8630 chr2 144511549 144511759 + 10.8 0.000 non-coding (NR_033258, exon 3 of 3) non-coding (NR_033258, exon 3 of 3) -7960 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chr5-1436 chr5 15604996 15605206 + 10.8 0.000 intron (NR_109945, intron 2 of 2) intron (NR_109945, intron 2 of 2) 9901 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr4-4855 chr4 111929588 111929798 + 10.8 0.000 Intergenic Intergenic -215761 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr11-3097 chr11 29051219 29051429 + 10.8 0.000 Intergenic L1PA5|LINE|L1 -543089 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr15-1957 chr15 34708430 34708640 + 10.8 0.000 Intergenic Intergenic 46463 NM_020660 57369 Hs.283816 NM_020660 ENSG00000159248 GJD2 CX36|GJA9 gap junction protein delta 2 protein-coding chr4-3041 chr4 137754868 137755078 + 10.8 0.000 Intergenic Intergenic 209242 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr2-2165 chr2 238458801 238459011 + 10.8 0.000 Intergenic Intergenic 31979 NM_001330196 51665 Hs.516788 NM_016114 ENSG00000065802 ASB1 ASB-1 ankyrin repeat and SOCS box containing 1 protein-coding chr19-1449 chr19 15107370 15107580 + 10.8 0.000 promoter-TSS (NM_001300910) promoter-TSS (NM_001300910) 74 NM_033025 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding chr6-4055 chr6 135263403 135263613 + 10.8 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 24348 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr12-1861 chr12 50101630 50101840 + 10.8 0.000 Intergenic Intergenic -2273 NM_005276 2819 Hs.524418 NM_005276 ENSG00000167588 GPD1 GPD-C|GPDH-C|HTGTI glycerol-3-phosphate dehydrogenase 1 protein-coding chr3-3109 chr3 144187843 144188053 + 10.8 0.000 Intergenic Intergenic 214867 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr3-5075 chr3 43414268 43414478 + 10.8 0.000 intron (NM_001204831, intron 11 of 12) intron (NM_001204831, intron 11 of 12) -62411 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chr1-9802 chr1 58653222 58653432 + 10.8 0.000 Intergenic Intergenic 46735 NM_001085487 114803 Hs.744921 NM_001085487 ENSG00000162601 MYSM1 2A-DUB|2ADUB|BMFS4 Myb like, SWIRM and MPN domains 1 protein-coding chr1-7664 chr1 13500443 13500653 + 10.8 0.000 intron (NM_001010847, intron 1 of 1) MER4A|LTR|ERV1 13455 NM_001010847 126755 Hs.657356 NM_001010847 ENSG00000162494 LRRC38 - leucine rich repeat containing 38 protein-coding chr9-5209 chr9 73830770 73830980 + 10.8 0.000 Intergenic Intergenic -540656 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr5-4607 chr5 31671280 31671490 + 10.8 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 32254 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr14-4225 chr14 98072353 98072563 + 10.8 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat -94334 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr3-3182 chr3 184110182 184110392 + 10.8 0.000 Intergenic LTR8|LTR|ERV1 -5109 NR_133658 106478970 Hs.581159 NR_133658 ENSG00000238020 HTR3E-AS1 - HTR3E antisense RNA 1 ncRNA chr12-5332 chr12 115126294 115126504 + 10.8 0.000 Intergenic MSTC|LTR|ERVL-MaLR -442224 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr1-5315 chr1 223007272 223007482 + 10.8 0.000 Intergenic L3|LINE|CR1 78953 NM_001369594 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr21-1349 chr21 33758405 33758615 + 10.8 0.000 intron (NM_001001132, intron 8 of 29) intron (NM_001001132, intron 8 of 29) 116009 NM_001331010 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr10-3652 chr10 99994492 99994702 + 10.8 0.000 intron (NM_015221, intron 1 of 16) intron (NM_015221, intron 1 of 16) 15350 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr10-1175 chr10 50067910 50068120 + 10.8 0.000 promoter-TSS (NR_038275) promoter-TSS (NR_038275) 61 NM_001330102 387680 Hs.365286 NM_018232 ENSG00000099290 WASHC2A FAM21A|FAM21B|bA56A21.1|bA98I6.1 WASH complex subunit 2A protein-coding chr11-7649 chr11 63851960 63852170 + 10.8 0.000 intron (NM_001163296, intron 1 of 16) Charlie1|DNA|hAT-Charlie 12955 NM_001163296 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr11-1115 chr11 376607 376817 + 10.8 0.000 exon (NM_178537, exon 14 of 20) exon (NM_178537, exon 14 of 20) 7213 NM_178537 338707 Hs.148074 NM_178537 ENSG00000182272 B4GALNT4 - beta-1,4-N-acetyl-galactosaminyltransferase 4 protein-coding chr1-11723 chr1 11027413 11027623 + 10.8 0.000 exon (NM_006610, exon 11 of 11) exon (NM_006610, exon 11 of 11) 14896 NM_007375 23435 Hs.300624 NM_007375 ENSG00000120948 TARDBP ALS10|TDP-43 TAR DNA binding protein protein-coding chr19-5083 chr19 53132824 53133034 + 10.8 0.000 promoter-TSS (NM_001136038) promoter-TSS (NM_001136038) -9 NM_001352142 55786 Hs.147765 NM_018355 ENSG00000170954 ZNF415 Pact|ZfLp zinc finger protein 415 protein-coding chr14-2452 chr14 77721414 77721624 + 10.8 0.000 intron (NM_001318844, intron 11 of 12) intron (NM_001318844, intron 11 of 12) 13416 NR_052025 81892 Hs.655105 NM_031210 ENSG00000119705 SLIRP C14orf156|DC50|PD04872 SRA stem-loop interacting RNA binding protein protein-coding chr6-8382 chr6 149969685 149969895 + 10.8 0.000 intron (NR_133659, intron 3 of 4) intron (NR_133659, intron 3 of 4) 5847 NM_025218 80329 Hs.653255 NM_025218 ENSG00000111981 ULBP1 N2DL-1|NKG2DL1|RAET1I UL16 binding protein 1 protein-coding chr6-8164 chr6 131885241 131885451 + 10.8 0.000 intron (NM_006208, intron 23 of 24) intron (NM_006208, intron 23 of 24) 66026 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr1-5016 chr1 71090092 71090302 + 10.8 0.000 intron (NR_046217, intron 1 of 3) intron (NR_046217, intron 1 of 3) 8873 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr22-1832 chr22 37137386 37137596 + 10.8 0.000 intron (NM_001346222, intron 6 of 9) intron (NM_001346222, intron 6 of 9) 12425 NM_000878 3560 Hs.474787 NM_000878 ENSG00000100385 IL2RB CD122|IL15RB|P70-75 interleukin 2 receptor subunit beta protein-coding chr9-4872 chr9 3252437 3252647 + 10.8 0.000 intron (NM_134428, intron 15 of 17) L2a|LINE|L2 70953 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr2-4221 chr2 216698827 216699037 + 10.8 0.000 Intergenic Intergenic -3383 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr9-7982 chr9 92720468 92720678 + 10.8 0.000 exon (NM_015250, exon 4 of 8) exon (NM_015250, exon 4 of 8) 44260 NM_001003800 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chr15-3105 chr15 64717934 64718144 + 10.8 0.000 Intergenic Intergenic -14758 NM_002537 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr10-1750 chr10 6786820 6787030 + 10.8 0.000 intron (NR_038291, intron 2 of 4) L1ME2|LINE|L1 7327 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr9-4877 chr9 3956248 3956458 + 10.8 0.000 intron (NM_001042413, intron 4 of 10) intron (NM_001042413, intron 4 of 10) 57707 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr17-5848 chr17 67241368 67241578 + 10.8 0.000 intron (NM_001330447, intron 2 of 32) intron (NM_001330447, intron 2 of 32) -3303 NR_136398 101928021 Hs.569824 NR_136398 LOC101928021 - uncharacterized LOC101928021 ncRNA chr6-5302 chr6 142118859 142119069 + 10.8 0.000 intron (NM_001324308, intron 1 of 2) LTR16|LTR|ERVL -14195 NM_001358410 100126572 NM_001358410 ENSG00000203733 GJE1 CX23 gap junction protein epsilon 1 protein-coding chr5-5042 chr5 89471524 89471734 + 10.8 0.000 Intergenic Intergenic 545091 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr8-2899 chr8 143179784 143179994 + 10.8 0.000 Intergenic MER51E|LTR|ERV1 -19235 NM_001130478 4062 Hs.159590 NM_002347 ENSG00000176956 LY6H NMLY6 lymphocyte antigen 6 family member H protein-coding chr14-1487 chr14 34981467 34981677 + 10.8 0.000 intron (NR_151701, intron 1 of 4) MER57B1|LTR|ERV1 994 NR_151701 100506157 NR_151701 SRP54-AS1 - SRP54 antisense RNA 1 (head to head) ncRNA chr16-5756 chr16 86713707 86713917 + 10.8 0.000 Intergenic Intergenic 8147 NR_135181 101928614 Hs.399823 NR_135181 ENSG00000260026 LINC02189 - long intergenic non-protein coding RNA 2189 ncRNA chr16-2024 chr16 11104962 11105172 + 10.8 0.000 intron (NM_015226, intron 18 of 22) intron (NM_015226, intron 18 of 22) 151115 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr15-3098 chr15 64264586 64264796 + 10.8 0.000 intron (NM_001329607, intron 2 of 11) L1MA6|LINE|L1 91482 NM_001329607 53944 Hs.646508 NM_022048 ENSG00000169118 CSNK1G1 CK1gamma1 casein kinase 1 gamma 1 protein-coding chr10-3461 chr10 58412483 58412693 + 10.8 0.000 Intergenic Intergenic 27178 NM_003201 7019 Hs.594250 NM_003201 ENSG00000108064 TFAM MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 transcription factor A, mitochondrial protein-coding chr10-4118 chr10 71369974 71370184 + 10.8 0.000 Intergenic Intergenic -26841 NM_052836 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr4-7258 chr4 47664304 47664514 + 10.8 0.000 intron (NM_006587, intron 11 of 21) MIRb|SINE|MIR 11740 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA chr8-4169 chr8 78972956 78973166 + 10.8 0.000 Intergenic Intergenic 135532 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA chr2-8869 chr2 176502665 176502875 + 10.8 0.000 Intergenic Intergenic 98282 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chrX-1814 chrX 96183983 96184193 + 10.8 0.000 Intergenic Intergenic 153814 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr1-3174 chr1 91699683 91699893 + 10.8 0.000 intron (NR_036634, intron 15 of 17) intron (NR_036634, intron 15 of 17) 186363 NR_036634 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr2-12004 chr2 28300861 28301071 + 10.8 0.000 intron (NM_001261840, intron 11 of 11) intron (NM_001261840, intron 11 of 11) 9493 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr6-1834 chr6 157714089 157714299 + 10.8 0.000 Intergenic Intergenic -109052 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr15-2472 chr15 87777352 87777562 + 10.8 0.000 Intergenic Intergenic 168811 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr1-10289 chr1 150150868 150151078 + 10.8 0.000 exon (NM_016274, exon 2 of 6) exon (NM_016274, exon 2 of 6) 387 NM_001304723 51177 Hs.438824 NM_016274 ENSG00000023902 PLEKHO1 CKIP-1|CKIP1|JBP|OC120 pleckstrin homology domain containing O1 protein-coding chr6-6049 chr6 130085705 130085915 + 10.8 0.000 intron (NM_001007102, intron 14 of 21) AluSz6|SINE|Alu 66166 NM_001346550 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr7-2858 chr7 110923000 110923210 + 10.8 0.000 intron (NM_032549, intron 4 of 5) intron (NM_032549, intron 4 of 5) -167901 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr12-1642 chr12 3199745 3199955 + 10.8 0.000 intron (NM_006675, intron 2 of 8) CpG 122471 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr2-4429 chr2 155114637 155114847 + 10.8 0.000 Intergenic AluYi6|SINE|Alu 416047 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr17-4621 chr17 7642634 7642844 + 10.8 0.000 Intergenic Intergenic -3888 NM_001303263 482 Hs.643540 NM_001678 ENSG00000129244 ATP1B2 AMOG ATPase Na+/K+ transporting subunit beta 2 protein-coding chr6-8266 chr6 138994672 138994882 + 10.8 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -6516 NM_001286611 85021 Hs.334603 NM_031922 ENSG00000135597 REPS1 NBIA7|RALBP1 RALBP1 associated Eps domain containing 1 protein-coding chr15-2107 chr15 68195571 68195781 + 10.8 0.000 intron (NR_104583, intron 1 of 1) intron (NR_104583, intron 1 of 1) 10434 NM_001031733 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr3-6351 chr3 83145918 83146128 + 10.8 0.000 Intergenic L2|LINE|L2 1159881 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr10-2266 chr10 126458482 126458692 + 10.8 0.000 intron (NR_148989, intron 6 of 6) intron (NR_148989, intron 6 of 6) 32657 NR_148989 728158 Hs.646701 NR_148989 LOC728158 - uncharacterized LOC728158 ncRNA chr8-5246 chr8 129561233 129561443 + 10.8 0.000 intron (NR_130917, intron 1 of 3) intron (NR_130917, intron 1 of 3) 13680 NR_130919 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr1-10152 chr1 108554725 108554935 + 10.8 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR -5270 NM_001010883 284611 Hs.200230 NM_001010883 ENSG00000162636 FAM102B SYM-3B family with sequence similarity 102 member B protein-coding chr1-8992 chr1 10432613 10432823 + 10.8 0.000 intron (NR_037187, intron 1 of 2) intron (NR_037187, intron 1 of 2) 1968 NM_001243768 100526739 Hs.412311 NM_198544 ENSG00000251503 CENPS-CORT APITD1|APITD1-CORT|CENP-S|CENPS|FAAP16|MHF1 CENPS-CORT readthrough protein-coding chr18-2188 chr18 60249055 60249265 + 10.8 0.000 Intergenic Intergenic 123615 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr1-9037 chr1 12181045 12181255 + 10.8 0.000 intron (NM_001066, intron 1 of 9) intron (NM_001066, intron 1 of 9) -10563 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr12-5047 chr12 88727249 88727459 + 10.8 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -146881 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr17-2941 chr17 57355121 57355331 + 10.8 0.000 intron (NM_001322250, intron 5 of 13) MLT1K|LTR|ERVL-MaLR 98207 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr2-3346 chr2 218089294 218089504 + 10.8 0.000 intron (NR_034176, intron 13 of 13) intron (NR_034176, intron 13 of 13) 20384 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr9-8408 chr9 120133577 120133787 + 10.8 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 111368 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr3-3368 chr3 44104948 44105158 + 10.8 0.000 Intergenic Intergenic -9159 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr22-4163 chr22 45220586 45220796 + 10.8 0.000 intron (NM_001009880, intron 1 of 9) AluJb|SINE|Alu -8225 NM_015264 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr2-11235 chr2 166244407 166244617 + 10.8 0.000 intron (NM_001365536, intron 18 of 26) MER63D|DNA|hAT-Blackjack -95351 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr11-2808 chr11 117144138 117144348 + 10.8 0.000 promoter-TSS (NR_110268) promoter-TSS (NR_110268) -41 NM_001184748 5049 Hs.728488 NM_002572 ENSG00000168092 PAFAH1B2 HEL-S-303 platelet activating factor acetylhydrolase 1b catalytic subunit 2 protein-coding chr1-6123 chr1 157880670 157880880 + 10.8 0.000 Intergenic Intergenic -38967 NM_001347698 922 Hs.134035 NM_005894 ENSG00000073754 CD5L AIM|API6|CT-2|PRO229|SP-ALPHA|Spalpha|hAIM CD5 molecule like protein-coding chr3-1159 chr3 112990918 112991128 + 10.8 0.000 promoter-TSS (NM_138485) promoter-TSS (NM_138485) 39 NM_014170 29083 Hs.127496 NM_014170 ENSG00000163607 GTPBP8 HSPC135 GTP binding protein 8 (putative) protein-coding chr19-3117 chr19 14610053 14610263 + 10.8 0.000 non-coding (NR_109784, exon 14 of 14) non-coding (NR_109784, exon 14 of 14) -12055 NR_132784 106635534 NR_132784 SNORA104 - small nucleolar RNA, H/ACA box 104 snoRNA chr3-6429 chr3 102232883 102233093 + 10.8 0.000 Intergenic L2|LINE|L2 69283 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr3-4558 chr3 146118037 146118247 + 10.8 0.000 intron (NM_182943, intron 3 of 19) intron (NM_182943, intron 3 of 19) 43042 NM_182943 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr9-3804 chr9 128298321 128298531 + 10.8 0.000 Intergenic AluSq2|SINE|Alu 22280 NM_001318089 375757 Hs.259594 NM_001040011 ENSG00000175854 SWI5 C9orf119|SAE3 SWI5 homologous recombination repair protein protein-coding chr12-1622 chr12 104007073 104007283 + 10.8 0.000 intron (NM_031302, intron 5 of 11) intron (NM_031302, intron 5 of 11) 41306 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr12-2323 chr12 186654 186864 + 10.8 0.000 Intergenic Intergenic -16886 NR_120475 101929384 Hs.569138 NR_120475 ENSG00000256577 LOC101929384 - uncharacterized LOC101929384 ncRNA chr11-3105 chr11 32983818 32984028 + 10.8 0.000 Intergenic Intergenic -31955 NM_001077242 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chr20-2668 chr20 45061304 45061514 + 10.8 0.000 intron (NM_001352385, intron 11 of 11) Tigger7|DNA|TcMar-Tigger 39718 NM_001322799 3787 Hs.117780 NM_002251 ENSG00000124134 KCNS1 Kv9.1 potassium voltage-gated channel modifier subfamily S member 1 protein-coding chr2-5291 chr2 67485400 67485610 + 10.8 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 88172 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr1-6471 chr1 20650402 20650612 + 10.8 0.000 non-coding (NR_046507, exon 1 of 3) non-coding (NR_046507, exon 1 of 3) 1686 NR_046507 100861548 Hs.710259 NR_046507 ENSG00000117242 PINK1-AS NAPINK1|PINK1-AS1|PINK1AS PINK1 antisense RNA ncRNA chr2-9315 chr2 224341549 224341759 + 10.8 0.000 Intergenic Intergenic 60340 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr12-1742 chr12 54300104 54300314 + 10.8 0.000 5' UTR (NM_001261461, exon 2 of 4) 5' UTR (NM_001261461, exon 2 of 4) 806 NM_001136023 4778 Hs.75643 NM_006163 ENSG00000123405 NFE2 NF-E2|p45 nuclear factor, erythroid 2 protein-coding chr6-3131 chr6 107781263 107781473 + 10.8 0.000 intron (NM_198081, intron 1 of 7) AluJb|SINE|Alu 42945 NM_001286408 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr5-8043 chr5 91401229 91401439 + 10.8 0.000 intron (NR_027435, intron 1 of 2) LTR78B|LTR|ERV1 -18017 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr5-6862 chr5 120195584 120195794 + 10.8 0.000 Intergenic L1P3|LINE|L1 -268589 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr2-3719 chr2 231395472 231395682 + 10.8 0.000 promoter-TSS (NM_145236) promoter-TSS (NM_145236) -133 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr14-3539 chr14 104422991 104423201 + 10.8 0.000 Intergenic Intergenic -156668 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr4-5037 chr4 140955575 140955785 + 10.8 0.000 intron (NM_020724, intron 2 of 6) intron (NM_020724, intron 2 of 6) 177789 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr2-7195 chr2 213422415 213422625 + 10.8 0.000 intron (NR_047660, intron 8 of 14) MER52A|LTR|ERV1 138056 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr9-3672 chr9 98132140 98132350 + 10.8 0.000 exon (NM_052820, exon 6 of 12) exon (NM_052820, exon 6 of 12) -13023 NM_014788 9830 Hs.575631 NM_014788 ENSG00000106785 TRIM14 - tripartite motif containing 14 protein-coding chr3-3830 chr3 27244448 27244658 + 10.8 0.000 intron (NM_199347, intron 24 of 24) LTR41B|LTR|ERVL -28030 NM_001304384 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr10-8397 chr10 83213015 83213225 + 10.8 0.000 Intergenic Intergenic 463969 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chrX-1886 chrX 131514309 131514519 + 10.8 0.000 Intergenic L1PA14|LINE|L1 -29660 NM_001004486 347468 Hs.553711 NM_001004486 ENSG00000171054 OR13H1 ORX1 olfactory receptor family 13 subfamily H member 1 protein-coding chr9-5402 chr9 94199717 94199927 + 10.8 0.000 intron (NR_160773, intron 1 of 2) L1M4a2|LINE|L1 4744 NR_046165 158257 Hs.652626 NR_046163 ENSG00000230262 LINC02603 MIRLET7DHG long intergenic non-protein coding RNA 2603 ncRNA chr19-3824 chr19 10593530 10593740 + 10.8 0.000 Intergenic Intergenic -6323 NM_001300887 10053 Hs.18894 NM_005498 ENSG00000129354 AP1M2 AP1-mu2|HSMU1B|MU-1B|MU1B|mu2 adaptor related protein complex 1 subunit mu 2 protein-coding chr2-6714 chr2 26927814 26928024 + 10.8 0.000 intron (NM_020134, intron 4 of 12) intron (NM_020134, intron 4 of 12) -42718 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr7-4438 chr7 117875682 117875892 + 10.8 0.000 Intergenic Intergenic -2346 NM_001363351 83992 Hs.592285 NM_033427 ENSG00000077063 CTTNBP2 C7orf8|CORTBP2|Orf4 cortactin binding protein 2 protein-coding chr11-2059 chr11 72482307 72482517 + 10.8 0.000 Intergenic Intergenic -47728 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr3-3265 chr3 63343851 63344061 + 10.8 0.000 intron (NM_001130003, intron 2 of 5) intron (NM_001130003, intron 2 of 5) 65648 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr1-11527 chr1 158105164 158105374 + 10.8 0.000 Intergenic L2a|LINE|L2 35371 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr10-3531 chr10 73863220 73863430 + 10.8 0.000 intron (NR_160045, intron 1 of 17) intron (NR_160045, intron 1 of 17) 11230 NM_001367518 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr17-1588 chr17 50258825 50259035 + 10.8 0.000 Intergenic Intergenic -12476 NM_001168215 162461 Hs.224630 NM_153229 ENSG00000167105 TMEM92 - transmembrane protein 92 protein-coding chr18-885 chr18 46696082 46696292 + 10.8 0.000 intron (NM_001307987, intron 1 of 5) intron (NM_001307987, intron 1 of 5) -39154 NM_144612 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr11-2451 chr11 43947146 43947356 + 10.8 0.000 Intergenic MSTB|LTR|ERVL-MaLR 4614 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr20-2930 chr20 1032575 1032785 + 10.8 0.000 Intergenic Intergenic -30369 NM_001040007 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding chr17-1709 chr17 48025023 48025233 + 10.8 0.000 Intergenic CpG -7754 NR_162100 113218499 NR_162100 MIR10226 - microRNA 10226 ncRNA chr14-2948 chr14 48939938 48940148 + 10.8 0.000 Intergenic Intergenic 646337 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr10-3332 chr10 9195454 9195664 + 10.8 0.000 Intergenic Intergenic -80054 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr3-6757 chr3 141184382 141184592 + 10.8 0.000 Intergenic Intergenic -47338 NM_001282728 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr14-3368 chr14 92309897 92310107 + 10.8 0.000 Intergenic Charlie20a|DNA|hAT-Charlie -12579 NM_153648 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr2-14528 chr2 229139634 229139844 + 10.8 0.000 intron (NM_001330157, intron 1 of 1) intron (NM_001330157, intron 1 of 1) 92353 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr5-2712 chr5 106415607 106415817 + 10.8 0.000 Intergenic Intergenic 595302 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr10-1624 chr10 75202749 75202959 + 10.8 0.000 Intergenic MER115|DNA|hAT-Tip100 -7300 NM_001324088 7417 Hs.355927 NM_003375 ENSG00000165637 VDAC2 POR voltage dependent anion channel 2 protein-coding chr9-5113 chr9 35856844 35857054 + 10.8 0.000 TTS (NM_001363622) TTS (NM_001363622) 13452 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chr1-5261 chr1 204157054 204157264 + 10.8 0.000 intron (NM_000537, intron 6 of 9) intron (NM_000537, intron 6 of 9) -5115 NM_001297762 55224 Hs.497469 NM_018208 ENSG00000143845 ETNK2 EKI2|HMFT1716 ethanolamine kinase 2 protein-coding chr4-4644 chr4 81739972 81740182 + 10.8 0.000 Intergenic Intergenic -268170 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr4-2556 chr4 82777273 82777483 + 10.8 0.000 intron (NM_001037582, intron 1 of 4) intron (NM_001037582, intron 1 of 4) 21418 NM_001037582 79966 Hs.379191 NM_024906 ENSG00000145284 SCD5 ACOD4|FADS4|HSCD5|SCD2|SCD4 stearoyl-CoA desaturase 5 protein-coding chr5-3868 chr5 136995673 136995883 + 10.8 0.000 intron (NM_004598, intron 6 of 10) intron (NM_004598, intron 6 of 10) -132419 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr1-11029 chr1 222370194 222370404 + 10.8 0.000 Intergenic Intergenic 177805 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr20-2489 chr20 33068559 33068769 + 10.8 0.000 intron (NM_182658, intron 9 of 14) L2b|LINE|L2 -12848 NM_182519 149954 Hs.38961 NM_182519 ENSG00000186191 BPIFB4 C20orf186|LPLUNC4|RY2G5|dJ726C3.5 BPI fold containing family B member 4 protein-coding chr10-5023 chr10 34007548 34007758 + 10.8 0.000 Intergenic Intergenic -234973 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr20-3312 chr20 16561304 16561514 + 10.8 0.000 intron (NM_001199866, intron 1 of 22) intron (NM_001199866, intron 1 of 22) 12039 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr7-5558 chr7 46511417 46511627 + 10.8 0.000 Intergenic LTR53|LTR|ERVL 185600 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr8-735 chr8 143418529 143418739 + 10.8 0.000 intron (NR_126358, intron 1 of 1) (CCAC)n|Simple_repeat|Simple_repeat 955 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr3-5422 chr3 169278082 169278292 + 10.8 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -130716 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr17-3715 chr17 18140048 18140258 + 10.8 0.000 intron (NM_016239, intron 18 of 64) MIRb|SINE|MIR 31397 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr8-4647 chr8 134691199 134691409 + 10.8 0.000 intron (NM_001289394, intron 1 of 16) L3|LINE|CR1 5251 NM_001167583 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding chr15-3079 chr15 62778221 62778431 + 10.8 0.000 intron (NM_015059, intron 40 of 55) intron (NM_015059, intron 40 of 55) -45631 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr20-1034 chr20 47673542 47673752 + 10.8 0.000 intron (NM_198596, intron 10 of 20) intron (NM_198596, intron 10 of 20) 112417 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr8-3790 chr8 26403988 26404198 + 10.8 0.000 intron (NM_004331, intron 3 of 5) intron (NM_004331, intron 3 of 5) 13680 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr16-3365 chr16 53350631 53350841 + 10.8 0.000 Intergenic AluJb|SINE|Alu 20476 NM_001347693 643802 Hs.451336 NM_001207030 LOC643802 - u3 small nucleolar ribonucleoprotein protein MPP10-like protein-coding chr5-1561 chr5 97629344 97629554 + 10.8 0.000 intron (NR_105028, intron 2 of 3) intron (NR_105028, intron 2 of 3) 124753 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr2-5470 chr2 128617201 128617411 + 10.8 0.000 Intergenic Intergenic -247294 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr1-11093 chr1 229057152 229057362 + 10.8 0.000 Intergenic Intergenic 117544 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr9-5169 chr9 63731358 63731568 + 10.8 0.000 Intergenic Intergenic -81478 NR_146625 203274 Hs.599821 NR_146625 LINC00537 - long intergenic non-protein coding RNA 537 ncRNA chr4-3957 chr4 180231878 180232088 + 10.8 0.000 Intergenic Intergenic 927166 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr3-6159 chr3 57770299 57770509 + 10.8 0.000 intron (NM_001304420, intron 1 of 21) L2c|LINE|L2 13148 NM_007159 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr1-10694 chr1 190477658 190477868 + 10.8 0.000 promoter-TSS (NR_110716) promoter-TSS (NR_110716) 101 NM_199051 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr7-4871 chr7 108385424 108385634 + 10.8 0.000 intron (NR_163871, intron 2 of 29) intron (NR_163871, intron 2 of 29) -57003 NM_001371178 chr4-8324 chr4 145366639 145366849 + 10.8 0.000 Intergenic L1PA4|LINE|L1 -26325 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr3-4711 chr3 56908940 56909150 + 10.8 0.000 intron (NM_001128615, intron 3 of 12) intron (NM_001128615, intron 3 of 12) 7391 NM_001289698 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr4-3697 chr4 55865421 55865631 + 10.8 0.000 intron (NM_001024924, intron 4 of 18) intron (NM_001024924, intron 4 of 18) 11876 NM_178237 55763 Hs.269665 NM_018261 ENSG00000090989 EXOC1 BM-102|SEC3|SEC3L1|SEC3P exocyst complex component 1 protein-coding chr2-4969 chr2 195942711 195942921 + 10.8 0.000 intron (NM_018897, intron 19 of 64) ERVL-E-int|LTR|ERVL 126021 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr6-6759 chr6 3172016 3172226 + 10.8 0.000 Intergenic HERVH-int|LTR|ERV1 -14577 NM_001310315 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr8-3896 chr8 38650446 38650656 + 10.8 0.000 Intergenic Intergenic -49294 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr7-2796 chr7 81131250 81131460 + 10.8 0.000 Intergenic Intergenic -208966 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr2-896 chr2 108448747 108448957 + 10.8 0.000 promoter-TSS (NM_181453) promoter-TSS (NM_181453) -354 NR_028063 9648 Hs.436505 NM_181453 ENSG00000135968 GCC2 GCC185|RANBP2L4|REN53 GRIP and coiled-coil domain containing 2 protein-coding chr16-6101 chr16 12860176 12860386 + 10.8 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -41317 NM_001145205 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr2-3590 chr2 68063037 68063247 + 10.8 0.000 promoter-TSS (NM_006333) promoter-TSS (NM_006333) -138 NM_173177 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding chr7-2820 chr7 99072911 99073121 + 10.8 0.000 intron (NM_020429, intron 1 of 18) MIR1_Amn|SINE|MIR 59851 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr6-7749 chr6 92011857 92012067 + 10.8 0.000 Intergenic LTR12C|LTR|ERV1 -321534 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr1-10648 chr1 181847098 181847308 + 10.8 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR 214509 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr6-1913 chr6 35356095 35356305 + 10.8 0.000 intron (NM_001171819, intron 2 of 6) intron (NM_001171819, intron 2 of 6) 13642 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr1-4065 chr1 211260287 211260497 + 10.8 0.000 intron (NM_018254, intron 1 of 10) CpG 445 NM_018254 55758 Hs.356399 NM_018254 ENSG00000117625 RCOR3 - REST corepressor 3 protein-coding chr6-1512 chr6 2732512 2732722 + 10.8 0.000 intron (NM_001012418, intron 2 of 12) intron (NM_001012418, intron 2 of 12) 18305 NM_001012418 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr19-4920 chr19 42763940 42764150 + 10.8 0.000 exon (NM_182707, exon 2 of 5) exon (NM_182707, exon 2 of 5) 1633 NM_001130167 440533 Hs.466843 NM_182707 ENSG00000124467 PSG8 PSG1 pregnancy specific beta-1-glycoprotein 8 protein-coding chr15-2732 chr15 98681566 98681776 + 10.8 0.000 intron (NM_000875, intron 1 of 20) intron (NM_000875, intron 1 of 20) -30450 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr9-2217 chr9 136249885 136250095 + 10.8 0.000 Intergenic MER134|DNA?|DNA? -4149 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr6-3318 chr6 166912767 166912977 + 10.8 0.000 Intergenic Intergenic 9174 NR_046644 100861523 Hs.634640 NR_046644 RPS6KA2-AS1 - RPS6KA2 antisense RNA 1 ncRNA chr5-2333 chr5 66718399 66718609 + 10.8 0.000 intron (NM_001290228, intron 1 of 4) intron (NM_001290228, intron 1 of 4) -110269 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr14-3041 chr14 59055504 59055714 + 10.8 0.000 Intergenic Intergenic -133058 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr5-2973 chr5 176995820 176996030 + 10.8 0.000 intron (NM_001199298, intron 1 of 14) L1ME1|LINE|L1 10517 NM_016290 51720 Hs.232721 NM_016290 ENSG00000087206 UIMC1 RAP80|X2HRIP110 ubiquitin interaction motif containing 1 protein-coding chr20-2180 chr20 46768840 46769050 + 10.8 0.000 Intergenic Intergenic 59296 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATORS|ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr13-1154 chr13 33328781 33328991 + 10.8 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) 6380 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr17-3926 chr17 58224471 58224681 + 10.8 0.000 Intergenic L1MC4|LINE|L1 -4971 NM_001165927 54903 Hs.408843 NM_017777 ENSG00000011143 MKS1 BBS13|JBTS28|MES|MKS|POC12 MKS transition zone complex subunit 1 protein-coding chr3-7303 chr3 15108267 15108477 + 10.8 0.000 Intergenic Intergenic -9215 NR_126155 64145 Hs.475565 NM_022340 ENSG00000131381 RBSN Rabenosyn-5|ZFYVE20 rabenosyn, RAB effector protein-coding chr6-5203 chr6 132298403 132298613 + 10.8 0.000 intron (NM_015529, intron 10 of 11) intron (NM_015529, intron 10 of 11) 102967 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr8-2491 chr8 143996656 143996866 + 10.8 0.000 Intergenic Intergenic 6703 NM_000837 2907 Hs.594634 NM_000837 ENSG00000178719 GRINA HNRGW|LFG1|NMDARA1|TMBIM3 glutamate ionotropic receptor NMDA type subunit associated protein 1 protein-coding chr22-3816 chr22 30753243 30753453 + 10.8 0.000 intron (NM_030758, intron 2 of 13) intron (NM_030758, intron 2 of 13) -10905 NM_001282740 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr19-3486 chr19 37962706 37962916 + 10.8 0.000 intron (NM_015073, intron 1 of 21) L1M4a2|LINE|L1 55603 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr17-3044 chr17 79831458 79831668 + 10.8 0.000 Intergenic Intergenic 7877 NM_003655 8535 Hs.405046 NM_003655 ENSG00000141582 CBX4 NBP16|PC2 chromobox 4 protein-coding chr10-1742 chr10 126692429 126692639 + 10.8 0.000 Intergenic LTR8|LTR|ERV1 -22024 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr22-3509 chr22 49110162 49110372 + 10.8 0.000 Intergenic MIRb|SINE|MIR 243497 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr8-4215 chr8 86101971 86102181 + 10.8 0.000 intron (NM_152565, intron 1 of 7) intron (NM_152565, intron 1 of 7) 3166 NM_152565 245972 Hs.436360 NM_152565 ENSG00000147614 ATP6V0D2 ATP6D2|VMA6 ATPase H+ transporting V0 subunit d2 protein-coding chr3-1479 chr3 78941712 78941922 + 10.8 0.000 intron (NM_002941, intron 3 of 30) intron (NM_002941, intron 3 of 30) 77642 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr9-2806 chr9 122512191 122512401 + 10.8 0.000 TTS (NM_054107) TTS (NM_054107) 1494 NM_054107 26740 Hs.460145 NM_054107 ENSG00000197233 OR1J2 HG152|HSA5|OR1J3|OR1J5|OR9-19|OST044 olfactory receptor family 1 subfamily J member 2 protein-coding chr1-11034 chr1 222844164 222844374 + 10.8 0.000 intron (NM_032890, intron 1 of 9) intron (NM_032890, intron 1 of 9) 29230 NM_032890 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr8-2363 chr8 30059773 30059983 + 10.8 0.000 Intergenic ERVL-B4-int|LTR|ERVL 23186 NM_016127 51669 Hs.521487 NM_016127 ENSG00000133872 SARAF FOAP-7|HSPC035|TMEM66|XTP3 store-operated calcium entry associated regulatory factor protein-coding chr7-5617 chr7 52414960 52415170 + 10.8 0.000 Intergenic MER20|DNA|hAT-Charlie -620568 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr17-1077 chr17 7549136 7549346 + 10.8 0.000 non-coding (NR_037146, exon 1 of 8) non-coding (NR_037146, exon 1 of 8) 183 NR_037146 8742 Hs.54673 NM_003809 ENSG00000239697 TNFSF12 APO3L|DR3LG|TNLG4A|TWEAK TNF superfamily member 12 protein-coding chr19-1959 chr19 47472104 47472314 + 10.8 0.000 promoter-TSS (NM_015063) promoter-TSS (NM_015063) -316 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr2-7065 chr2 166251361 166251571 + 10.8 0.000 intron (NR_110260, intron 6 of 11) intron (NR_110260, intron 6 of 11) -102305 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr3-2268 chr3 59540281 59540491 + 10.8 0.000 Intergenic Intergenic 118111 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr5-5368 chr5 133166343 133166553 + 10.8 0.000 Intergenic L1MB3|LINE|L1 114435 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr2-1532 chr2 160368046 160368256 + 10.8 0.000 intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) 39731 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr11-7112 chr11 123471352 123471562 + 10.8 0.000 intron (NM_001367421, intron 2 of 20) L2c|LINE|L2 -38459 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr7-4575 chr7 7005268 7005478 + 10.8 0.000 Intergenic Intergenic 61672 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr9-5831 chr9 129868241 129868451 + 10.8 0.000 exon (NM_001110303, exon 11 of 26) exon (NM_001110303, exon 11 of 26) -1259 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr12-4227 chr12 106585863 106586073 + 10.8 0.000 intron (NM_213594, intron 1 of 17) CpG 3061 NM_213594 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr10-5866 chr10 115242017 115242227 + 10.8 0.000 intron (NM_207303, intron 10 of 28) intron (NM_207303, intron 10 of 28) 148757 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chrX-1126 chrX 25346235 25346445 + 10.8 0.000 Intergenic Charlie8|DNA|hAT-Charlie -330375 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr5-4106 chr5 73638522 73638732 + 10.8 0.000 intron (NM_001177693, intron 1 of 35) intron (NM_001177693, intron 1 of 35) 12469 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr2-4794 chr2 39616680 39616890 + 10.8 0.000 Intergenic Intergenic -48713 NM_001167959 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr5-5833 chr5 178841184 178841394 + 10.8 0.000 Intergenic Intergenic -18664 NM_058230 117608 Hs.724051 NM_058230 ENSG00000178338 ZNF354B KID2 zinc finger protein 354B protein-coding chr7-3336 chr7 74290218 74290428 + 10.8 0.000 intron (NM_032421, intron 1 of 15) intron (NM_032421, intron 1 of 15) 848 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr4-5135 chr4 152601178 152601388 + 10.8 0.000 Intergenic Intergenic 64855 NR_039658 100616193 NR_039658 ENSG00000283792 MIR4453 - microRNA 4453 ncRNA chr1-5292 chr1 213989281 213989491 + 10.8 0.000 intron (NM_002763, intron 1 of 4) CpG 853 NM_002763 5629 Hs.741808 NM_002763 ENSG00000117707 PROX1 - prospero homeobox 1 protein-coding chrX-2179 chrX 39044546 39044756 + 10.8 0.000 Intergenic Intergenic -240768 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr2-5215 chr2 45758195 45758405 + 10.8 0.000 intron (NM_005400, intron 1 of 14) MIR|SINE|MIR 106625 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr8-2711 chr8 98290089 98290299 + 10.8 0.000 intron (NR_135747, intron 1 of 11) MIRb|SINE|MIR 4041 NM_024759 79815 Hs.309489 NM_024759 ENSG00000104361 NIPAL2 NPAL2 NIPA like domain containing 2 protein-coding chr9-8771 chr9 133724273 133724483 + 10.8 0.000 intron (NM_001134707, intron 6 of 20) L1MB8|LINE|L1 13974 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr15-2725 chr15 95341732 95341942 + 10.8 0.000 Intergenic Intergenic -14737 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr5-6435 chr5 158929159 158929369 + 10.8 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 168692 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr5-1947 chr5 17436487 17436697 + 10.8 0.000 promoter-TSS (NR_134273) promoter-TSS (NR_134273) -145 NR_134273 101929544 Hs.23725 NR_134273 ENSG00000248455 LINC02217 - long intergenic non-protein coding RNA 2217 ncRNA chrX-1703 chrX 16883316 16883526 + 10.8 0.000 Intergenic Intergenic -13059 NM_002893 5931 Hs.495755 NM_002893 ENSG00000102054 RBBP7 RbAp46 RB binding protein 7, chromatin remodeling factor protein-coding chr6-2669 chr6 7175711 7175921 + 10.8 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 67855 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr10-8439 chr10 86198269 86198479 + 10.8 0.000 intron (NM_017551, intron 3 of 15) intron (NM_017551, intron 3 of 15) 66414 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr2-6167 chr2 240473829 240474039 + 10.8 0.000 Intergenic L1M3c|LINE|L1 -17234 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr5-5746 chr5 171271207 171271417 + 10.8 0.000 intron (NM_022897, intron 25 of 27) intron (NM_022897, intron 25 of 27) -37936 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr7-4145 chr7 76416697 76416907 + 10.8 0.000 intron (NM_007155, intron 1 of 8) (TC)n|Simple_repeat|Simple_repeat -7105 NM_080744 136853 Hs.567684 NM_080744 ENSG00000146700 SSC4D S4D-SRCRB|SRCRB-S4D|SRCRB4D scavenger receptor cysteine rich family member with 4 domains protein-coding chr19-1863 chr19 18254576 18254786 + 10.8 0.000 intron (NR_036575, intron 1 of 3) intron (NR_036575, intron 1 of 3) 738 NR_036575 729966 Hs.710873 NR_036575 ENSG00000284797 LOC729966 - uncharacterized LOC729966 ncRNA chr17-3110 chr17 16589279 16589489 + 10.8 0.000 Intergenic CpG -20172 NM_001346171 57336 Hs.99724 NM_020653 ENSG00000141040 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding chr19-3487 chr19 38351823 38352033 + 10.8 0.000 intron (NM_001330496, intron 7 of 27) intron (NM_001330496, intron 7 of 27) 16098 NM_021185 57828 Hs.324335 NM_021185 ENSG00000099338 CATSPERG C19orf15 cation channel sperm associated auxiliary subunit gamma protein-coding chr8-2815 chr8 125310500 125310710 + 10.8 0.000 intron (NM_001349486, intron 5 of 7) intron (NM_001349486, intron 5 of 7) -119753 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr22-1481 chr22 24289254 24289464 + 10.8 0.000 intron (NM_015330, intron 2 of 16) intron (NM_015330, intron 2 of 16) 18528 NM_015330 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr6-2154 chr6 16131141 16131351 + 10.8 0.000 intron (NM_013262, intron 2 of 6) intron (NM_013262, intron 2 of 6) 2160 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr13-2085 chr13 72864733 72864943 + 10.8 0.000 intron (NR_146206, intron 10 of 16) intron (NR_146206, intron 10 of 16) 82705 NR_146206 10464 Hs.441926 NM_006346 ENSG00000083535 PIBF1 C13orf24|CEP90|JBTS33|PIBF progesterone immunomodulatory binding factor 1 protein-coding chr8-1291 chr8 48818361 48818571 + 10.8 0.000 Intergenic Intergenic -83155 NR_157026 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr6-4786 chr6 76587631 76587841 + 10.8 0.000 intron (NR_149101, intron 1 of 2) MIRb|SINE|MIR 5887 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr4-4405 chr4 43698850 43699060 + 10.8 0.000 Intergenic L1M1|LINE|L1 -206412 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr8-5591 chr8 92184110 92184320 + 10.8 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -80830 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr11-5039 chr11 91431060 91431270 + 10.8 0.000 Intergenic L1PA11|LINE|L1 -561963 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr5-5747 chr5 171291332 171291542 + 10.8 0.000 intron (NM_022897, intron 25 of 27) intron (NM_022897, intron 25 of 27) -17811 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr12-4228 chr12 107455546 107455756 + 10.8 0.000 intron (NM_001347944, intron 1 of 14) MLT1H|LTR|ERVL-MaLR -125223 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr6-4911 chr6 96839749 96839959 + 10.8 0.000 Intergenic Intergenic -2377 NM_030784 81491 Hs.221364 NM_030784 ENSG00000112218 GPR63 PSP24(beta)|PSP24B G protein-coupled receptor 63 protein-coding chrX-1243 chrX 96193749 96193959 + 10.8 0.000 Intergenic Intergenic 144048 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr8-3394 chr8 61734350 61734560 + 10.8 0.000 Intergenic Intergenic 19667 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr11-6782 chr11 87670759 87670969 + 10.8 0.000 Intergenic MIRb|SINE|MIR 48547 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr3-6249 chr3 68428685 68428895 + 10.8 0.000 intron (NM_001252216, intron 3 of 4) intron (NM_001252216, intron 3 of 4) -71847 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr13-2474 chr13 50902440 50902650 + 10.8 0.000 intron (NR_046552, intron 1 of 2) intron (NR_046552, intron 1 of 2) -7133 NM_001142279 79621 Hs.306291 NM_024570 ENSG00000136104 RNASEH2B AGS2|DLEU8 ribonuclease H2 subunit B protein-coding chr14-2920 chr14 40425530 40425740 + 10.8 0.000 Intergenic THE1C|LTR|ERVL-MaLR -529076 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr17-5747 chr17 59272855 59273065 + 10.8 0.000 TTS (NM_001165994) TTS (NM_001165994) 52449 NM_001165993 284161 Hs.631744 NM_182569 ENSG00000153982 GDPD1 GDE4 glycerophosphodiester phosphodiesterase domain containing 1 protein-coding chr2-8217 chr2 95951647 95951857 + 10.8 0.000 intron (NM_001310154, intron 14 of 88) intron (NM_001310154, intron 14 of 88) 40072 NM_001310154 400986 Hs.646318 NM_001010914 ENSG00000174501 ANKRD36C - ankyrin repeat domain 36C protein-coding chr18-1924 chr18 34118438 34118648 + 10.8 0.000 intron (NM_001353232, intron 2 of 9) intron (NM_001353232, intron 2 of 9) -69931 NM_001198549 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr20-2745 chr20 50518203 50518413 + 10.8 0.000 intron (NM_001278618, intron 1 of 8) intron (NM_001278618, intron 1 of 8) 7925 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr1-6316 chr1 2371943 2372153 + 10.8 0.000 intron (NM_001301060, intron 8 of 10) L1MB7|LINE|L1 -19387 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr9-4313 chr9 124146370 124146580 + 10.8 0.000 Intergenic MER77B|LTR|ERVL -111131 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr1-5553 chr1 233707585 233707795 + 10.8 0.000 Intergenic Intergenic 83538 NR_039625 100616390 NR_039625 ENSG00000265744 MIR4427 - microRNA 4427 ncRNA chr8-2377 chr8 42674231 42674441 + 10.8 0.000 Intergenic Intergenic -23030 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr16-2955 chr16 5493366 5493576 + 10.8 0.000 Intergenic Intergenic 122779 NR_110902 101926950 Hs.613285 NR_110902 ENSG00000260338 LINC01570 - long intergenic non-protein coding RNA 1570 ncRNA chr20-2779 chr20 53691220 53691430 + 10.8 0.000 Intergenic AluJo|SINE|Alu 82971 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr19-2961 chr19 11214270 11214480 + 10.8 0.000 exon (NM_020812, exon 34 of 48) exon (NM_020812, exon 34 of 48) 10747 NR_134909 105372273 Hs.579864 NR_134909 ENSG00000267082 LOC105372273 - uncharacterized LOC105372273 ncRNA chr21-1328 chr21 16197398 16197608 + 10.8 0.000 intron (NR_136543, intron 1 of 4) intron (NR_136543, intron 1 of 4) 3124 NR_136543 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr6-8009 chr6 117223669 117223879 + 10.8 0.000 Intergenic Intergenic -41784 NM_153453 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chrX-1145 chrX 38007819 38008029 + 10.8 0.000 intron (NM_138780, intron 1 of 16) intron (NM_138780, intron 1 of 16) 1371 NM_138780 94122 Hs.662334 NM_138780 ENSG00000147041 SYTL5 slp5 synaptotagmin like 5 protein-coding chr8-3675 chr8 16388503 16388713 + 10.8 0.000 Intergenic L2a|LINE|L2 -195817 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr2-2932 chr2 7010422 7010632 + 10.8 0.000 intron (NM_001349184, intron 3 of 8) intron (NM_001349184, intron 3 of 8) 67353 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr2-10382 chr2 176267208 176267418 + 10.8 0.000 Intergenic Intergenic -2129 NM_006554 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr9-2248 chr9 71681777 71681987 + 10.8 0.000 Intergenic Intergenic 86631 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr3-5799 chr3 27862232 27862442 + 10.8 0.000 Intergenic Intergenic -28201 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr8-3848 chr8 31463966 31464176 + 10.8 0.000 Intergenic Intergenic -175681 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr5-5699 chr5 164987466 164987676 + 10.8 0.000 Intergenic LTR1F2|LTR|ERV1 517292 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr12-4716 chr12 50160689 50160899 + 10.8 0.000 intron (NM_001331069, intron 1 of 11) intron (NM_001331069, intron 1 of 11) 6575 NM_001331073 91012 Hs.270525 NM_147190 ENSG00000139624 CERS5 LASS5|Trh4 ceramide synthase 5 protein-coding chr18-924 chr18 68995698 68995908 + 10.8 0.000 intron (NM_001093729, intron 8 of 9) THE1D-int|LTR|ERVL-MaLR 197723 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr11-5369 chr11 64945025 64945235 + 10.8 0.000 intron (NM_001037225, intron 8 of 10) AluY|SINE|Alu -9237 NM_130769 170589 Hs.436119 NM_130769 ENSG00000149735 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone subunit alpha 2 protein-coding chr2-8172 chr2 86185026 86185236 + 10.8 0.000 intron (NM_006839, intron 1 of 14) AluY|SINE|Alu 7977 NR_039939 100616159 NR_039939 ENSG00000265420 MIR4779 - microRNA 4779 ncRNA chr5-3865 chr5 135899766 135899976 + 10.8 0.000 Intergenic Intergenic -4030 NM_000590 3578 Hs.960 NM_000590 ENSG00000145839 IL9 HP40|IL-9|P40 interleukin 9 protein-coding chr15-1986 chr15 42024160 42024370 + 10.8 0.000 intron (NM_001206670, intron 1 of 19) intron (NM_001206670, intron 1 of 19) 26438 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chr4-1517 chr4 88792434 88792644 + 10.8 0.000 intron (NM_001265578, intron 1 of 16) intron (NM_001265578, intron 1 of 16) 30822 NM_001015045 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr2-3589 chr2 65630695 65630905 + 10.8 0.000 Intergenic Intergenic -198201 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr18-1852 chr18 24189011 24189221 + 10.8 0.000 intron (NM_001242508, intron 6 of 15) intron (NM_001242508, intron 6 of 15) 49632 NM_138644 26256 Hs.511983 NM_012189 ENSG00000154040 CABYR CABYRa|CABYRc|CABYRc/d|CABYRe|CBP86|CT88|FSP-2|FSP2 calcium binding tyrosine phosphorylation regulated protein-coding chr2-6192 chr2 10171964 10172174 + 10.8 0.000 intron (NR_161344, intron 3 of 3) intron (NR_161344, intron 3 of 3) 20602 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr4-4219 chr4 15820590 15820800 + 10.8 0.000 intron (NR_132660, intron 2 of 6) L1PA10|LINE|L1 42367 NM_001775 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr7-6040 chr7 110152547 110152757 + 10.8 0.000 Intergenic Intergenic -192439 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr4-2207 chr4 129391986 129392196 + 10.8 0.000 Intergenic MER52A|LTR|ERV1 295939 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr14-2978 chr14 51205565 51205775 + 10.8 0.000 Intergenic Intergenic -34577 NM_030755 81542 Hs.125221 NM_030755 ENSG00000139921 TMX1 PDIA11|TMX|TXNDC|TXNDC1 thioredoxin related transmembrane protein 1 protein-coding chr9-3905 chr9 134463381 134463591 + 10.8 0.000 Intergenic Intergenic 56926 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr16-4216 chr16 13110314 13110524 + 10.8 0.000 intron (NM_001145204, intron 2 of 4) intron (NM_001145204, intron 2 of 4) 208821 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr3-1745 chr3 157746410 157746620 + 10.8 0.000 Intergenic Tigger2|DNA|TcMar-Tigger 203171 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr13-1429 chr13 43088142 43088352 + 10.8 0.000 intron (NM_013238, intron 5 of 5) intron (NM_013238, intron 5 of 5) -24918 NR_047013 100874159 Hs.633241 NR_047013 LINC00400 - long intergenic non-protein coding RNA 400 ncRNA chr19-6501 chr19 18048857 18049067 + 10.8 0.000 Intergenic Intergenic 37972 NM_153701 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr6-4238 chr6 6266520 6266730 + 10.8 0.000 exon (NM_000129, exon 4 of 15) exon (NM_000129, exon 4 of 15) 54066 NM_000129 2162 Hs.335513 NM_000129 ENSG00000124491 F13A1 F13A coagulation factor XIII A chain protein-coding chr1-9543 chr1 39799945 39800155 + 10.8 0.000 Intergenic MIR|SINE|MIR 11074 NR_135805 101929536 Hs.552820 NR_135805 ENSG00000261798 LOC101929536 - uncharacterized LOC101929536 ncRNA chr14-1593 chr14 91090574 91090784 + 10.8 0.000 intron (NM_001358312, intron 1 of 13) intron (NM_001358312, intron 1 of 13) -23334 NM_001102368 80017 Hs.309849 NM_024952 ENSG00000133943 DGLUCY C14orf159 D-glutamate cyclase protein-coding chr1-2044 chr1 227903589 227903799 + 10.8 0.000 Intergenic Intergenic 37989 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr20-2856 chr20 62383535 62383745 + 10.8 0.000 Intergenic L1MA10|LINE|L1 -3463 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr10-4653 chr10 125326839 125327049 + 10.8 0.000 Intergenic MER96|DNA|hAT-Tip100 -165914 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr21-1058 chr21 29333258 29333468 + 10.8 0.000 intron (NR_027655, intron 4 of 7) intron (NR_027655, intron 4 of 7) 28159 NR_027655 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding chr7-2125 chr7 31937409 31937619 + 10.8 0.000 intron (NM_001322059, intron 3 of 17) MER4D0|LTR|ERV1 132893 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr14-2951 chr14 49250137 49250347 + 10.8 0.000 Intergenic L1PA15|LINE|L1 336138 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr4-3843 chr4 125520777 125520987 + 10.8 0.000 Intergenic L1M5|LINE|L1 13623 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr3-4246 chr3 141465273 141465483 + 10.8 0.000 Intergenic Intergenic -21649 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr13-2153 chr13 109693063 109693273 + 10.8 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -35106 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr4-1976 chr4 166093826 166094036 + 10.8 0.000 intron (NM_012464, intron 19 of 20) LTR5B|LTR|ERVK 220694 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr6-4520 chr6 38036034 38036244 + 10.8 0.000 intron (NM_021943, intron 2 of 5) L1M4a2|LINE|L1 216412 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr4-4407 chr4 43901950 43902160 + 10.8 0.000 Intergenic Intergenic -114806 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr8-2161 chr8 48903338 48903548 + 10.8 0.000 Intergenic Intergenic 17986 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr10-1222 chr10 35126654 35126864 + 10.8 0.000 promoter-TSS (NM_001352467) promoter-TSS (NM_001352467) -82 NM_001881 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr10-3413 chr10 32761608 32761818 + 10.8 0.000 intron (NM_001321115, intron 29 of 43) ERVL-B4-int|LTR|ERVL 139759 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr2-5075 chr2 10305376 10305586 + 10.8 0.000 intron (NM_134421, intron 1 of 5) intron (NM_134421, intron 1 of 5) 1781 NM_134421 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr19-1723 chr19 49415386 49415596 + 10.8 0.000 intron (NM_144688, intron 17 of 19) intron (NM_144688, intron 17 of 19) 7950 NM_178449 113091 Hs.339845 NM_178449 ENSG00000142538 PTH2 TIP39 parathyroid hormone 2 protein-coding chr9-5349 chr9 89532576 89532786 + 10.8 0.000 Intergenic Intergenic -34708 NM_001371194 chr5-3184 chr5 76257432 76257642 + 10.8 0.000 intron (NM_014979, intron 4 of 12) (TG)n|Simple_repeat|Simple_repeat -145748 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr12-2247 chr12 70170173 70170383 + 10.8 0.000 Intergenic Intergenic -72752 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr9-5929 chr9 133619779 133619989 + 10.8 0.000 Intergenic Intergenic -16479 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr8-4941 chr8 109103625 109103835 + 10.8 0.000 intron (NM_003301, intron 2 of 2) intron (NM_003301, intron 2 of 2) 17102 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr15-961 chr15 42152846 42153056 + 10.8 0.000 intron (NM_213600, intron 6 of 19) intron (NM_213600, intron 6 of 19) 3685 NR_033151 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr9-2937 chr9 136082606 136082816 + 10.8 0.000 intron (NM_144653, intron 1 of 5) intron (NM_144653, intron 1 of 5) 12578 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr15-1895 chr15 73464528 73464738 + 10.8 0.000 intron (NM_001042367, intron 1 of 5) intron (NM_001042367, intron 1 of 5) 21469 NM_001348772 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chr11-4593 chr11 134014162 134014372 + 10.8 0.000 Intergenic AluJo|SINE|Alu -18005 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LINC02731 - long intergenic non-protein coding RNA 2731 ncRNA chr17-2126 chr17 19533861 19534071 + 10.8 0.000 exon (NM_018242, exon 1 of 17) exon (NM_018242, exon 1 of 17) 112 NM_018242 55244 Hs.232054 NM_018242 ENSG00000142494 SLC47A1 MATE1 solute carrier family 47 member 1 protein-coding chr17-3157 chr17 61432124 61432334 + 10.8 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -20193 NM_001321120 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr11-5604 chr11 114606110 114606320 + 10.8 0.000 Intergenic Intergenic -10429 NM_001077639 54827 Hs.179100 NM_017678 ENSG00000137634 NXPE4 C11orf33|FAM55D neurexophilin and PC-esterase domain family member 4 protein-coding chr5-3913 chr5 169374893 169375103 + 10.8 0.000 Intergenic L1PA7|LINE|L1 -73859 NM_003062 6586 Hs.552087 NM_003062 ENSG00000184347 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit guidance ligand 3 protein-coding chr13-1137 chr13 29561149 29561359 + 10.8 0.000 intron (NM_003045, intron 1 of 12) intron (NM_003045, intron 1 of 12) 34434 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr1-2479 chr1 95023642 95023852 + 10.8 0.000 intron (NM_144988, intron 3 of 3) intron (NM_144988, intron 3 of 3) -37849 NR_132786 101928098 Hs.730090 NR_132786 ENSG00000230427 LOC101928098 - uncharacterized LOC101928098 ncRNA chr7-5897 chr7 95120294 95120504 + 10.8 0.000 intron (NM_017650, intron 3 of 15) intron (NM_017650, intron 3 of 15) 204133 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr18-1855 chr18 24497071 24497281 + 10.8 0.000 Intergenic Intergenic 36539 NM_021624 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr9-7227 chr9 1267927 1268137 + 10.8 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 216545 NR_163472 10655 Hs.59506 NM_006557 ENSG00000173253 DMRT2 - doublesex and mab-3 related transcription factor 2 protein-coding chr4-7956 chr4 110684956 110685166 + 10.8 0.000 Intergenic Intergenic -42938 NM_001204397 5308 Hs.643588 NM_000325 ENSG00000164093 PITX2 ARP1|ASGD4|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS paired like homeodomain 2 protein-coding chr17-5297 chr17 21817742 21817952 + 10.8 0.000 Intergenic Intergenic 125324 NM_001194958 100134444 Hs.200629 NM_001194958 ENSG00000260458 KCNJ18 KIR2.6|TTPP2 potassium voltage-gated channel subfamily J member 18 protein-coding chr9-5926 chr9 133551994 133552204 + 10.8 0.000 intron (NM_001145320, intron 9 of 18) AluSx1|SINE|Alu 17395 NM_014694 9719 Hs.522543 NM_014694 ENSG00000197859 ADAMTSL2 ADAMTSL-2|GPHYSD1 ADAMTS like 2 protein-coding chr1-9407 chr1 31777591 31777801 + 10.8 0.000 Intergenic L2c|LINE|L2 -13356 NM_001294335 576 Hs.524138 NM_001294335 ENSG00000121753 ADGRB2 BAI2 adhesion G protein-coupled receptor B2 protein-coding chr16-7030 chr16 88139950 88140160 + 10.8 0.000 Intergenic Intergenic -39070 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr16-3127 chr16 71407267 71407477 + 10.8 0.000 Intergenic Intergenic 19092 NR_146574 105371333 Hs.578738 NR_146574 ENSG00000261348 LINC02136 - long intergenic non-protein coding RNA 2136 ncRNA chr2-2460 chr2 100801218 100801428 + 10.8 0.000 Intergenic Intergenic -18816 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chrX-1535 chrX 35459959 35460169 + 10.8 0.000 Intergenic LTR16A|LTR|ERVL -338278 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr5-5251 chr5 119662740 119662950 + 10.8 0.000 Intergenic AluJr|SINE|Alu 33286 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr1-9969 chr1 80639786 80639996 + 10.8 0.000 intron (NR_125940, intron 2 of 3) intron (NR_125940, intron 2 of 3) -1396 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr3-5857 chr3 33739446 33739656 + 10.8 0.000 Intergenic L1MC1|LINE|L1 -21297 NM_001365627 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr2-3586 chr2 53784687 53784897 + 10.8 0.000 intron (NM_001164165, intron 1 of 9) MLT1C|LTR|ERVL-MaLR -2139 NM_001127398 27248 Hs.438336 NM_015701 ENSG00000068912 ERLEC1 C2orf30|CIM|CL24936|CL25084|HEL117|XTP3-B|XTP3TPB endoplasmic reticulum lectin 1 protein-coding chr10-5859 chr10 114348433 114348643 + 10.8 0.000 intron (NM_001001936, intron 1 of 18) L1ME1|LINE|L1 55964 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr11-9115 chr11 32991489 32991699 + 10.8 0.000 Intergenic L2c|LINE|L2 -24284 NM_001077242 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chr9-5160 chr9 39559394 39559604 + 10.8 0.000 Intergenic Intergenic -94973 NR_003528 401509 Hs.449445 NM_001032297 ZNF658B - zinc finger protein 658B (pseudogene) pseudo chr10-5527 chr10 84988032 84988242 + 10.8 0.000 Intergenic Intergenic 210768 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr6-2953 chr6 35691363 35691573 + 10.8 0.000 intron (NM_001145775, intron 2 of 11) intron (NM_001145775, intron 2 of 11) -2526 NM_004117 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr2-4604 chr2 118495263 118495473 + 10.8 0.000 Intergenic Tigger19a|DNA|TcMar-Tigger 107598 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr7-2289 chr7 49692098 49692308 + 10.8 0.000 Intergenic L1M8|LINE|L1 -81435 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr8-2532 chr8 25974167 25974377 + 10.8 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 71141 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr22-2410 chr22 17931528 17931738 + 10.8 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) -24747 NM_001122731 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr17-3990 chr17 67557929 67558139 + 10.8 0.000 intron (NM_181671, intron 4 of 9) intron (NM_181671, intron 4 of 9) -86449 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr7-3553 chr7 14631423 14631633 + 10.8 0.000 intron (NM_001350722, intron 13 of 25) intron (NM_001350722, intron 13 of 25) 209922 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr1-3395 chr1 211326630 211326840 + 10.8 0.000 promoter-TSS (NM_001033910) promoter-TSS (NM_001033910) -98 NM_001319207 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr9-5490 chr9 101727674 101727884 + 10.8 0.000 intron (NM_133445, intron 1 of 8) intron (NM_133445, intron 1 of 8) 10801 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr7-4178 chr7 120364337 120364547 + 10.8 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 91267 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr10-4457 chr10 73545776 73545986 + 10.8 0.000 intron (NR_146997, intron 4 of 21) intron (NR_146997, intron 4 of 21) 7459 NR_135250 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr1-2556 chr1 15994631 15994841 + 10.8 0.000 Intergenic Intergenic -9500 NM_178840 149563 Hs.29190 NM_178840 ENSG00000183888 SRARP C1orf64|ERRF steroid receptor associated and regulated protein protein-coding chr22-1921 chr22 46175792 46176002 + 10.8 0.000 intron (NM_001001928, intron 2 of 7) L1MD1|LINE|L1 25102 NM_001362873 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr5-7321 chr5 16025591 16025801 + 10.8 0.000 Intergenic Intergenic 90514 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chrX-1221 chrX 77426812 77427022 + 10.8 0.000 Intergenic Intergenic -20472 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr14-2785 chr14 20606272 20606482 + 10.8 0.000 non-coding (NR_122043, exon 5 of 5) non-coding (NR_122043, exon 5 of 5) -15554 NM_001024822 493901 Hs.729466 NM_001024822 ENSG00000258436 RNASE12 HEL-S-85p|RAI1 ribonuclease A family member 12 (inactive) protein-coding chr9-5788 chr9 128356076 128356286 + 10.8 0.000 intron (NM_005094, intron 12 of 12) L2a|LINE|L2 4134 NR_031672 100302233 NR_031672 ENSG00000221641 MIR1268A MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a microRNA 1268a ncRNA chr1-8948 chr1 8792495 8792705 + 10.8 0.000 intron (NM_012102, intron 1 of 23) intron (NM_012102, intron 1 of 23) 25040 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr3-7973 chr3 173007248 173007458 + 10.8 0.000 intron (NM_031955, intron 4 of 10) intron (NM_031955, intron 4 of 10) 133882 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr1-2713 chr1 233613543 233613753 + 10.8 0.000 promoter-TSS (NM_002245) promoter-TSS (NM_002245) -458 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr6-1580 chr6 20495407 20495617 + 10.8 0.000 Intergenic AluSx1|SINE|Alu -38945 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr4-3489 chr4 136060938 136061148 + 10.8 0.000 Intergenic LTR108e_Mam|LTR|ERVL -147363 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr6-2708 chr6 43299605 43299815 + 10.8 0.000 exon (NM_006672, exon 3 of 10) exon (NM_006672, exon 3 of 10) 1450 NM_153320 10864 Hs.485438 NM_006672 ENSG00000137204 SLC22A7 NLT|OAT2|hOAT11 solute carrier family 22 member 7 protein-coding chr1-16196 chr1 207501427 207501637 + 10.8 0.000 intron (NM_000573, intron 1 of 38) intron (NM_000573, intron 1 of 38) 5375 NM_000573 1378 Hs.334019 NM_000573 ENSG00000203710 CR1 C3BR|C4BR|CD35|KN complement C3b/C4b receptor 1 (Knops blood group) protein-coding chr3-3155 chr3 170572884 170573094 + 10.8 0.000 intron (NM_020949, intron 1 of 7) intron (NM_020949, intron 1 of 7) 13086 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr13-2855 chr13 110246600 110246810 + 10.8 0.000 intron (NM_001845, intron 1 of 51) UCON28c|Unknown|Unknown 60452 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr2-10520 chr2 231526475 231526685 + 10.8 0.000 intron (NM_006056, intron 2 of 2) intron (NM_006056, intron 2 of 2) 3865 NM_006056 10316 Hs.471619 NM_006056 ENSG00000171596 NMUR1 (FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R neuromedin U receptor 1 protein-coding chr3-5147 chr3 55770111 55770321 + 10.8 0.000 intron (NR_132749, intron 13 of 17) MLT1I|LTR|ERVL-MaLR 82378 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr2-9520 chr2 237888374 237888584 + 10.8 0.000 intron (NM_001308353, intron 3 of 3) L1ME4c|LINE|L1 28856 NM_001308353 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr16-2342 chr16 48680480 48680690 + 10.8 0.000 Intergenic Intergenic -70405 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr5-2013 chr5 32018263 32018473 + 10.8 0.000 intron (NM_178140, intron 6 of 24) intron (NM_178140, intron 6 of 24) -82209 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr9-1978 chr9 112969567 112969777 + 10.8 0.000 Intergenic Intergenic 42520 NM_001101338 169834 Hs.192877 NM_001101338 ENSG00000285447 ZNF883 - zinc finger protein 883 protein-coding chr12-1915 chr12 85836157 85836367 + 10.8 0.000 5' UTR (NM_005447, exon 1 of 2) 5' UTR (NM_005447, exon 1 of 2) 147 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr16-3019 chr16 31003406 31003616 + 10.8 0.000 intron (NM_052874, intron 1 of 9) intron (NM_052874, intron 1 of 9) 7127 NM_052874 112755 Hs.542230 NM_052874 ENSG00000099365 STX1B GEFSP9|STX1B1|STX1B2 syntaxin 1B protein-coding chr2-7366 chr2 2197442 2197652 + 10.8 0.000 intron (NM_015025, intron 2 of 24) (AC)n|Simple_repeat|Simple_repeat -121685 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr5-3172 chr5 73274857 73275067 + 10.8 0.000 Intergenic Intergenic -62944 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr5-2003 chr5 857385 857595 + 10.8 0.000 Intergenic Intergenic -6504 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr4-1281 chr4 75844076 75844286 + 10.8 0.000 Intergenic Intergenic 58271 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr11-3438 chr11 64234843 64235053 + 10.8 0.000 TTS (NM_005528) TTS (NM_005528) 364 NM_003377 7423 Hs.732095 NM_003377 ENSG00000173511 VEGFB VEGFL|VRF vascular endothelial growth factor B protein-coding chr2-7120 chr2 185541822 185542032 + 10.8 0.000 Intergenic Intergenic 196792 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr2-8218 chr2 96014953 96015163 + 10.8 0.000 intron (NR_003698, intron 1 of 3) intron (NR_003698, intron 1 of 3) 4507 NR_003698 729234 Hs.720108 NR_003698 ENSG00000231584 FAHD2CP - fumarylacetoacetate hydrolase domain containing 2C, pseudogene pseudo chr13-558 chr13 27374764 27374974 + 10.8 0.000 Intergenic Intergenic -49750 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr7-6303 chr7 139959341 139959551 + 10.8 0.000 intron (NM_001366537, intron 7 of 11) intron (NM_001366537, intron 7 of 11) 104275 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr13-2718 chr13 93963624 93963834 + 10.8 0.000 intron (NM_005708, intron 3 of 8) intron (NM_005708, intron 3 of 8) -105256 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr16-2071 chr16 85211332 85211542 + 10.8 0.000 Intergenic MIR3|SINE|MIR 3641 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr2-2826 chr2 85997225 85997435 + 10.8 0.000 Intergenic Intergenic 108050 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr14-1679 chr14 75619885 75620095 + 10.8 0.000 intron (NM_001195283, intron 1 of 9) intron (NM_001195283, intron 1 of 9) 14450 NM_001195283 55640 Hs.509966 NM_017791 ENSG00000119686 FLVCR2 C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH|SLC49A2 feline leukemia virus subgroup C cellular receptor family member 2 protein-coding chr10-8088 chr10 68163989 68164199 + 10.8 0.000 intron (NR_045662, intron 8 of 19) MLT1L|LTR|ERVL-MaLR 54606 NR_045663 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr10-2770 chr10 124441137 124441347 + 10.8 0.000 Intergenic AluJb|SINE|Alu 8793 NM_001146340 390010 Hs.290255 NM_001146340 ENSG00000229544 NKX1-2 C10orf121|NKX-1.1|bB238F13.2 NK1 homeobox 2 protein-coding chr1-6368 chr1 8831928 8832138 + 10.8 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -14393 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr11-5192 chr11 11192839 11193049 + 10.8 0.000 Intergenic L1PA13|LINE|L1 160306 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr6-6570 chr6 137171052 137171262 + 10.8 0.000 intron (NM_181310, intron 1 of 4) L2a|LINE|L2 2487 NM_181310 116379 Hs.126891 NM_052962 ENSG00000164485 IL22RA2 CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16 interleukin 22 receptor subunit alpha 2 protein-coding chr17-4996 chr17 81583842 81584052 + 10.8 0.000 intron (NM_001369698, intron 12 of 16) intron (NM_001369698, intron 12 of 16) -6514 NR_130139 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr2-5668 chr2 201115987 201116197 + 10.8 0.000 promoter-TSS (NR_147249) promoter-TSS (NR_147249) -12 NM_001127184 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS|cFLIP CASP8 and FADD like apoptosis regulator protein-coding chr16-2016 chr16 3188022 3188232 + 10.8 0.000 promoter-TSS (NM_001370641) promoter-TSS (NM_001370641) -77 NM_001370640 4992 Hs.664502 NM_012360 ENSG00000168124 OR1F1 OLFMF|OR16-36|OR16-37|OR16-88|OR16-89|OR16-90|OR1F10|OR1F13P|OR1F4|OR1F5|OR1F6|OR1F7|OR1F8|OR1F9|OR3-145|ORL1023 olfactory receptor family 1 subfamily F member 1 protein-coding chr15-2105 chr15 67321026 67321236 + 10.8 0.000 intron (NM_001322475, intron 3 of 17) intron (NM_001322475, intron 3 of 17) -65933 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding chr14-1500 chr14 49364040 49364250 + 10.8 0.000 Intergenic Intergenic 222235 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr21-1074 chr21 31937922 31938132 + 10.8 0.000 intron (NM_014586, intron 2 of 10) intron (NM_014586, intron 2 of 10) 65007 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr9-5365 chr9 90636898 90637108 + 10.8 0.000 intron (NM_017594, intron 1 of 1) MER47B|DNA|TcMar-Tigger 5821 NM_017594 54769 Hs.165636 NM_017594 ENSG00000165023 DIRAS2 Di-Ras2 DIRAS family GTPase 2 protein-coding chr9-8394 chr9 119137822 119138032 + 10.8 0.000 Intergenic Intergenic 231508 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr4-3770 chr4 93722934 93723144 + 10.8 0.000 intron (NM_001286838, intron 13 of 14) intron (NM_001286838, intron 13 of 14) -105714 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr2-7856 chr2 49416083 49416293 + 10.8 0.000 Intergenic MER20|DNA|hAT-Charlie -261661 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding chr10-1815 chr10 125101562 125101772 + 10.8 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) 57110 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr20-2546 chr20 36019616 36019826 + 10.8 0.000 intron (NR_130714, intron 8 of 8) L2a|LINE|L2 31239 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr7-4798 chr7 90528794 90529004 + 10.8 0.000 Intergenic MSTA|LTR|ERVL-MaLR 59260 NM_001365443 102723899 Hs.731917 NM_001365443 LOC102723899 - uncharacterized LOC102723899 protein-coding chr10-3226 chr10 103241225 103241435 + 10.8 0.000 Intergenic Intergenic -4557 NM_001143909 729020 Hs.458437 NM_001143909 ENSG00000235376 RPEL1 - ribulose-5-phosphate-3-epimerase like 1 protein-coding chr20-1211 chr20 15916479 15916689 + 10.8 0.000 intron (NR_130924, intron 1 of 1) intron (NR_130924, intron 1 of 1) 6730 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr21-1031 chr21 23864309 23864519 + 10.8 0.000 Intergenic AluSc8|SINE|Alu 456963 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr2-4471 chr2 237624767 237624977 + 10.8 0.000 Intergenic Intergenic -2715 NM_001137550 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr3-4106 chr3 108954092 108954302 + 10.8 0.000 promoter-TSS (NM_005459) promoter-TSS (NM_005459) -318 NM_005459 9626 Hs.233363 NM_005459 ENSG00000138472 GUCA1C GCAP3 guanylate cyclase activator 1C protein-coding chr5-1097 chr5 132227138 132227348 + 10.8 0.000 promoter-TSS (NM_004199) promoter-TSS (NM_004199) -1 NM_001017973 8974 Hs.519568 NM_004199 ENSG00000072682 P4HA2 MYP25 prolyl 4-hydroxylase subunit alpha 2 protein-coding chr11-6293 chr11 61453599 61453809 + 10.8 0.000 Intergenic MIRb|SINE|MIR 23579 NM_017841 54949 Hs.313247 NM_017841 ENSG00000167985 SDHAF2 C11orf79|PGL2|SDH5 succinate dehydrogenase complex assembly factor 2 protein-coding chr5-4895 chr5 67493783 67493993 + 10.8 0.000 Intergenic Intergenic 152901 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr7-6091 chr7 117575591 117575801 + 10.8 0.000 intron (NM_000492, intron 11 of 26) LTR16B2|LTR|ERVL -11020 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr1-14369 chr1 43306984 43307194 + 10.8 0.000 intron (NM_001253357, intron 4 of 22) intron (NM_001253357, intron 4 of 22) 6107 NM_005424 7075 Hs.78824 NM_005424 ENSG00000066056 TIE1 JTK14|TIE tyrosine kinase with immunoglobulin like and EGF like domains 1 protein-coding chr7-9738 chr7 157494648 157494858 + 10.8 0.000 intron (NR_110157, intron 3 of 3) MSTB1|LTR|ERVL-MaLR 28522 NR_110157 101927914 Hs.623826 NR_110157 ENSG00000234210 LOC101927914 - uncharacterized LOC101927914 ncRNA chr4-7595 chr4 81149308 81149518 + 10.8 0.000 intron (NM_006259, intron 8 of 18) intron (NM_006259, intron 8 of 18) 4744 NM_001282480 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding chr1-7942 chr1 174357825 174358035 + 10.8 0.000 intron (NM_001366445, intron 11 of 13) MIR|SINE|MIR 82830 NM_001366449 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr4-4525 chr4 67453001 67453211 + 10.8 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -31106 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr11-4234 chr11 64644907 64645117 + 10.8 0.000 intron (NM_015080, intron 17 of 22) intron (NM_015080, intron 17 of 22) -1467 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr3-5651 chr3 11560795 11561005 + 10.8 0.000 intron (NM_001128219, intron 3 of 4) L3b|LINE|CR1 7898 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr17-2007 chr17 82843676 82843886 + 10.8 0.000 intron (NM_005993, intron 13 of 38) L1ME2z|LINE|L1 -3759 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr9-3785 chr9 126708469 126708679 + 10.8 0.000 Intergenic Intergenic 94131 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chrX-933 chrX 35711285 35711495 + 10.8 0.000 Intergenic Intergenic -86952 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chrX-4792 chrX 98992094 98992304 + 10.8 0.000 Intergenic THE1B|LTR|ERVL-MaLR 1418074 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr7-2502 chr7 30755785 30755995 + 10.8 0.000 3' UTR (NM_001199219, exon 3 of 3) 3' UTR (NM_001199219, exon 3 of 3) 3755 NM_001199219 11185 Hs.632629 NM_006774 ENSG00000241644 INMT TEMT indolethylamine N-methyltransferase protein-coding chr17-4445 chr17 49431631 49431841 + 10.8 0.000 Intergenic AluSx|SINE|Alu -16831 NM_001281715 5245 Hs.514303 NM_002634 ENSG00000167085 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding chr12-3060 chr12 6430588 6430798 + 10.8 0.000 Intergenic L1ME3G|LINE|L1 -14192 NM_001242 939 Hs.355307 NM_001242 ENSG00000139193 CD27 S152|S152. LPFS2|T14|TNFRSF7|Tp55 CD27 molecule protein-coding chr3-5819 chr3 30597015 30597225 + 10.8 0.000 Intergenic Intergenic -9382 NM_001024847 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr17-2244 chr17 7915842 7916052 + 10.8 0.000 exon (NM_001358699, exon 1 of 2) exon (NM_001358699, exon 1 of 2) 248 NM_001358699 284023 Hs.744470 NM_001358699 ENSG00000179859 RNF227 LINC02581 ring finger protein 227 protein-coding chr5-6869 chr5 121816148 121816358 + 10.8 0.000 Intergenic Intergenic -35629 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr3-2235 chr3 45154799 45155009 + 10.8 0.000 Intergenic Intergenic -8482 NM_178181 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr12-4617 chr12 40751586 40751796 + 10.8 0.000 intron (NM_001256063, intron 1 of 15) MIRb|SINE|MIR 59249 NM_001256063 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr4-3876 chr4 139888411 139888621 + 10.8 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 222697 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr1-5407 chr1 15991505 15991715 + 10.8 0.000 Intergenic Intergenic -12626 NM_178840 149563 Hs.29190 NM_178840 ENSG00000183888 SRARP C1orf64|ERRF steroid receptor associated and regulated protein protein-coding chr18-710 chr18 9454460 9454670 + 10.8 0.000 Intergenic Intergenic -20948 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr5-3957 chr5 6705817 6706027 + 10.8 0.000 non-coding (NR_103771, exon 1 of 3) non-coding (NR_103771, exon 1 of 3) 1789 NR_103771 100505625 Hs.550028 NR_103771 ENSG00000248677 LINC02102 - long intergenic non-protein coding RNA 2102 ncRNA chr17-3611 chr17 1212170 1212380 + 10.8 0.000 intron (NM_001322841, intron 1 of 22) AluJr|SINE|Alu 17447 NM_001322841 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr2-13508 chr2 150411587 150411797 + 10.8 0.000 Intergenic Intergenic 76003 NM_005168 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr4-1793 chr4 8183322 8183532 + 10.8 0.000 Intergenic Intergenic -15863 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr1-3752 chr1 1510965 1511175 + 10.8 0.000 Intergenic LTR10A|LTR|ERV1 -1092 NM_001170535 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr8-4710 chr8 140710990 140711200 + 10.8 0.000 intron (NR_148037, intron 25 of 34) AluSz6|SINE|Alu 7474 NM_001352749 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr11-6619 chr11 73952486 73952696 + 10.8 0.000 intron (NM_153614, intron 1 of 7) intron (NM_153614, intron 1 of 7) 2272 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr20-1001 chr20 63025527 63025737 + 10.8 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 11396 NR_028295 100144596 Hs.187773 NM_022099 LINC00029 C20orf51|NCRNA00029 long intergenic non-protein coding RNA 29 ncRNA chr4-4217 chr4 15805578 15805788 + 10.8 0.000 intron (NR_132660, intron 1 of 6) L2a|LINE|L2 27355 NM_001775 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr13-1830 chr13 80418633 80418843 + 10.8 0.000 Intergenic L1MEc|LINE|L1 -77612 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr6-2668 chr6 7129314 7129524 + 10.8 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 21458 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr8-2607 chr8 57000366 57000576 + 10.8 0.000 Intergenic Intergenic -6604 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr16-6128 chr16 19508159 19508369 + 10.8 0.000 intron (NR_136689, intron 3 of 5) intron (NR_136689, intron 3 of 5) 13834 NM_001324066 51573 Hs.512607 NM_016641 ENSG00000006007 GDE1 363E6.2|MIR16 glycerophosphodiester phosphodiesterase 1 protein-coding chr12-3529 chr12 132458406 132458616 + 10.8 0.000 Intergenic Intergenic -31640 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr19-1143 chr19 29666790 29667000 + 10.8 0.000 intron (NM_024310, intron 1 of 1) intron (NM_024310, intron 1 of 1) 1434 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr3-3623 chr3 105167008 105167218 + 10.8 0.000 Intergenic Intergenic -199600 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr8-4380 chr8 102621921 102622131 + 10.8 0.000 Intergenic Intergenic 31938 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr14-1812 chr14 38098424 38098634 + 10.8 0.000 Intergenic L1MD1|LINE|L1 -109375 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr5-2044 chr5 106526249 106526459 + 10.8 0.000 Intergenic MLT1I-int|LTR|ERVL-MaLR 484660 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr10-3964 chr10 111360407 111360617 + 10.8 0.000 Intergenic Intergenic 246221 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr4-5082 chr4 146706195 146706405 + 10.8 0.000 TTS (NM_001317806) TTS (NM_001317806) 67407 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr1-10576 chr1 175145120 175145330 + 10.8 0.000 intron (NM_022093, intron 18 of 18) intron (NM_022093, intron 18 of 18) 47551 NM_001162895 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr1-5485 chr1 116855355 116855565 + 10.8 0.000 Intergenic Intergenic -54456 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr6-5161 chr6 127071739 127071949 + 10.8 0.000 Intergenic Intergenic -46827 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr13-1718 chr13 95788036 95788246 + 10.8 0.000 intron (NM_006260, intron 11 of 11) L2c|LINE|L2 111002 NM_006260 5611 Hs.59214 NM_006260 ENSG00000102580 DNAJC3 ACPHD|ERdj6|HP58|P58|P58IPK|PRKRI DnaJ heat shock protein family (Hsp40) member C3 protein-coding chr13-2121 chr13 91372896 91373106 + 10.8 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 21687 NR_029508 407048 Hs.24115 NR_029508 ENSG00000283705 MIR92A1 C13orf25|MIR17HG|MIR92-1|MIRH1|MIRHG1|MIRN92-1|MIRN92A-1|MIRN92A1|miRNA92-1|mir-92a-1 microRNA 92a-1 ncRNA chr16-4638 chr16 73771673 73771883 + 10.8 0.000 Intergenic Intergenic 384973 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr17-2712 chr17 63913100 63913310 + 10.8 0.000 Intergenic AluSx1|SINE|Alu -1947 NM_001318 1444 Hs.654390 NM_001318 ENSG00000204414 CSHL1 CS-5|CSHP1|CSL|GHB4|hCS-L chorionic somatomammotropin hormone like 1 protein-coding chr13-1434 chr13 49265814 49266024 + 10.8 0.000 intron (NM_030911, intron 4 of 9) intron (NM_030911, intron 4 of 9) 17994 NM_030911 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr4-2734 chr4 6732676 6732886 + 10.8 0.000 Intergenic Intergenic 16607 NM_018366 55330 Hs.7570 NM_018366 ENSG00000186222 BLOC1S4 BCAS4L|BLOS4|CNO biogenesis of lysosomal organelles complex 1 subunit 4 protein-coding chr6-3094 chr6 86432834 86433044 + 10.8 0.000 Intergenic Intergenic -504589 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr18-1999 chr18 41679813 41680023 + 10.8 0.000 Intergenic L2a|LINE|L2 -159241 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr12-5416 chr12 121967713 121967923 + 10.8 0.000 intron (NM_001178003, intron 16 of 17) intron (NM_001178003, intron 16 of 17) 49226 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr18-829 chr18 9828342 9828552 + 10.8 0.000 intron (NM_006868, intron 5 of 6) intron (NM_006868, intron 5 of 6) -57526 NM_032243 84203 Hs.98712 NM_032243 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 protein-coding chr7-5340 chr7 28535772 28535982 + 10.8 0.000 intron (NM_182899, intron 3 of 9) intron (NM_182899, intron 3 of 9) 100262 NM_004904 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr1-4880 chr1 33962807 33963017 + 10.8 0.000 intron (NM_052896, intron 3 of 69) L2a|LINE|L2 93956 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr18-1797 chr18 12302893 12303103 + 10.8 0.000 Intergenic Intergenic -4671 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr9-5836 chr9 130118027 130118237 + 10.8 0.000 intron (NM_001136557, intron 16 of 19) MIRb|SINE|MIR 26087 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr10-5339 chr10 71566837 71567047 + 10.8 0.000 intron (NM_052836, intron 7 of 12) intron (NM_052836, intron 7 of 12) -55022 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr15-1631 chr15 89485923 89486133 + 10.8 0.000 intron (NM_001321041, intron 2 of 10) intron (NM_001321041, intron 2 of 10) 10555 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr4-5822 chr4 99655398 99655608 + 10.8 0.000 promoter-TSS (NM_001354435) promoter-TSS (NM_001354435) -824 NM_001354435 285556 Hs.480371 NM_001354435 ENSG00000248713 C4orf54 FOPV chromosome 4 open reading frame 54 protein-coding chr22-1393 chr22 37993210 37993420 + 10.8 0.000 intron (NM_001301130, intron 5 of 5) MIRc|SINE|MIR 4521 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr13-1741 chr13 107874126 107874336 + 10.8 0.000 Intergenic Intergenic -6735 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding chr13-3540 chr13 23923668 23923878 + 10.8 0.000 intron (NR_073430, intron 3 of 4) MIRc|SINE|MIR 25542 NR_073430 400110 Hs.744780 NM_207439 ANKRD20A19P - ankyrin repeat domain 20 family member A19, pseudogene pseudo chr20-1509 chr20 36158910 36159120 + 10.8 0.000 intron (NM_012156, intron 1 of 21) intron (NM_012156, intron 1 of 21) -3255 NR_147703 100130373 Hs.570339 NR_147703 LOC100130373 - uncharacterized LOC100130373 ncRNA chr14-3123 chr14 67471910 67472120 + 10.8 0.000 3' UTR (NM_182526, exon 3 of 3) 3' UTR (NM_182526, exon 3 of 3) 16706 NM_001348542 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr11-3101 chr11 32087569 32087779 + 10.8 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -3400 NM_002901 5954 Hs.97887 NM_002901 ENSG00000049449 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1 protein-coding chr15-1235 chr15 69784588 69784798 + 10.8 0.000 Intergenic Intergenic -50541 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr6-5071 chr6 115922982 115923192 + 10.8 0.000 Intergenic Intergenic -115644 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo chr3-7094 chr3 180075972 180076182 + 10.8 0.000 Intergenic L1MA2|LINE|L1 -39140 NM_001349399 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr1-2170 chr1 29283273 29283483 + 10.8 0.000 intron (NM_133177, intron 12 of 30) intron (NM_133177, intron 12 of 30) 46856 NM_133178 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr12-3948 chr12 5961960 5962170 + 10.8 0.000 intron (NM_000552, intron 47 of 51) MLT1A0|LTR|ERVL-MaLR -15833 NM_001278597 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr3-4529 chr3 122592581 122592791 + 10.8 0.000 intron (NM_001113523, intron 1 of 11) MIR|SINE|MIR 15036 NM_001113523 165631 Hs.120250 NM_152615 ENSG00000173200 PARP15 ARTD7|BAL3|pART7 poly(ADP-ribose) polymerase family member 15 protein-coding chr17-2633 chr17 4999078 4999288 + 10.8 0.000 intron (NM_006612, intron 1 of 22) intron (NM_006612, intron 1 of 22) 1233 NM_006612 10749 Hs.435120 NM_006612 ENSG00000129250 KIF1C LTXS1|SATX2|SAX2|SPAX2|SPG58 kinesin family member 1C protein-coding chr2-1788 chr2 237441549 237441759 + 10.8 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -27447 NM_057167 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr15-2987 chr15 52464195 52464405 + 10.8 0.000 intron (NM_001142495, intron 1 of 39) L2b|LINE|L2 64580 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr14-1274 chr14 69279588 69279798 + 10.8 0.000 intron (NM_020692, intron 1 of 15) intron (NM_020692, intron 1 of 15) 19535 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr13-4117 chr13 80495508 80495718 + 10.8 0.000 Intergenic Intergenic -154487 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr8-2499 chr8 15644924 15645134 + 10.8 0.000 intron (NM_001356429, intron 2 of 10) intron (NM_001356429, intron 2 of 10) 104766 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr7-4571 chr7 6528661 6528871 + 10.8 0.000 intron (NM_001145118, intron 2 of 21) intron (NM_001145118, intron 2 of 21) 22670 NM_001145118 392862 Hs.512174 NM_001145118 ENSG00000215045 GRID2IP DELPHILIN Grid2 interacting protein protein-coding chr3-3828 chr3 25831748 25831958 + 10.8 0.000 Intergenic Intergenic 41763 NM_017897 54995 Hs.55781 NM_017897 ENSG00000151093 OXSM CEM1|FASN2D|KASI|KS 3-oxoacyl-ACP synthase, mitochondrial protein-coding chr9-2705 chr9 86794261 86794471 + 10.8 0.000 Intergenic Intergenic 153140 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr3-2831 chr3 16203121 16203331 + 10.8 0.000 intron (NM_001319051, intron 3 of 9) intron (NM_001319051, intron 3 of 9) -13550 NM_001319052 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr14-1182 chr14 61280496 61280706 + 10.8 0.000 exon (NM_001017970, exon 1 of 1) exon (NM_001017970, exon 1 of 1) 737 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr14-2787 chr14 20721138 20721348 + 10.8 0.000 Intergenic AluSc8|SINE|Alu -24644 NM_006683 10876 Hs.304757 NM_006683 ENSG00000181562 EDDM3A EP3A|FAM12A|HE3-ALPHA|HE3A|HE3ALPHA|RAM1 epididymal protein 3A protein-coding chr6-6277 chr6 36284613 36284823 + 10.8 0.000 intron (NM_001145717, intron 1 of 7) Charlie15a|DNA|hAT-Charlie 14258 NM_001145717 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr20-1219 chr20 21559979 21560189 + 10.8 0.000 Intergenic Intergenic -9940 NR_109880 101929625 Hs.542413 NR_109880 LINC01727 - long intergenic non-protein coding RNA 1727 ncRNA chr5-1871 chr5 142129866 142130076 + 10.8 0.000 intron (NM_030571, intron 1 of 7) intron (NM_030571, intron 1 of 7) 21192 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chrX-1234 chrX 87773902 87774112 + 10.8 0.000 Intergenic Intergenic 256205 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr4-3152 chr4 181939373 181939583 + 10.8 0.000 Intergenic Intergenic -109505 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr18-1678 chr18 73892492 73892702 + 10.8 0.000 Intergenic Intergenic 255237 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr5-1603 chr5 36403640 36403850 + 10.8 0.000 Intergenic Intergenic -101843 NM_001323273 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chrX-4143 chrX 29468945 29469155 + 10.8 0.000 intron (NM_014271, intron 5 of 10) intron (NM_014271, intron 5 of 10) -105228 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr15-2580 chr15 58724414 58724624 + 10.8 0.000 intron (NM_001320570, intron 1 of 14) L1MEc|LINE|L1 25188 NM_001110 102 Hs.172028 NM_001110 ENSG00000137845 ADAM10 AD10|AD18|CD156c|CDw156|HsT18717|MADM|RAK|kuz ADAM metallopeptidase domain 10 protein-coding chr12-5002 chr12 79829371 79829581 + 10.8 0.000 intron (NM_001244990, intron 5 of 24) MER5A|DNA|hAT-Charlie 84435 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr17-2815 chr17 15123143 15123353 + 10.8 0.000 Intergenic Intergenic -17061 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr2-6551 chr2 217597509 217597719 + 10.8 0.000 intron (NR_026597, intron 2 of 12) intron (NR_026597, intron 2 of 12) 158979 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr5-3883 chr5 146049416 146049626 + 10.8 0.000 intron (NM_152550, intron 7 of 9) MIRc|SINE|MIR 56056 NM_001029869 153770 Hs.162369 NM_001029869 ENSG00000173261 PLAC8L1 - PLAC8 like 1 protein-coding chr11-2090 chr11 102975014 102975224 + 10.8 0.000 Intergenic Intergenic -19387 NM_002427 4322 Hs.2936 NM_002427 ENSG00000137745 MMP13 CLG3|MANDP1|MDST|MMP-13 matrix metallopeptidase 13 protein-coding chr4-1538 chr4 153987627 153987837 + 10.8 0.000 Intergenic Intergenic -198649 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr22-1142 chr22 45574534 45574744 + 10.8 0.000 exon (NM_006486, exon 15 of 17) exon (NM_006486, exon 15 of 17) 31008 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr17-5171 chr17 10135801 10136011 + 10.8 0.000 intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) 62700 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr1-3469 chr1 46613352 46613562 + 10.8 0.000 intron (NM_201403, intron 1 of 3) intron (NM_201403, intron 1 of 3) 1676 NM_145279 148932 Hs.632401 NM_145279 ENSG00000142961 MOB3C MOB1E|MOBKL2C MOB kinase activator 3C protein-coding chr9-3733 chr9 116737045 116737255 + 10.8 0.000 intron (NM_014010, intron 12 of 21) intron (NM_014010, intron 12 of 21) 49845 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr13-1596 chr13 42565051 42565261 + 10.8 0.000 intron (NM_033012, intron 1 of 6) intron (NM_033012, intron 1 of 6) 2420 NM_033012 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr13-1316 chr13 111116186 111116396 + 10.8 0.000 promoter-TSS (NR_046667) promoter-TSS (NR_046667) -613 NR_046667 100874238 Hs.569218 NR_046667 ENSG00000235875 ARHGEF7-AS2 - ARHGEF7 antisense RNA 2 ncRNA chr10-4967 chr10 29369823 29370033 + 10.8 0.000 Intergenic MIRb|SINE|MIR -39606 NR_110926 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr17-2451 chr17 35089872 35090082 + 10.8 0.000 promoter-TSS (NR_037713) promoter-TSS (NR_037713) -751 NR_037713 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr5-1689 chr5 79991078 79991288 + 10.8 0.000 promoter-TSS (NM_001306212) promoter-TSS (NM_001306212) 79 NM_001167741 345778 Hs.531418 NM_001010891 ENSG00000177034 MTX3 - metaxin 3 protein-coding chrX-2884 chrX 148562618 148562828 + 10.8 0.000 intron (NM_001169124, intron 1 of 19) intron (NM_001169124, intron 1 of 19) 62106 NM_001169124 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr11-5537 chr11 93983811 93984021 + 10.8 0.000 Intergenic Intergenic -37438 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chr3-3908 chr3 46998109 46998319 + 10.8 0.000 exon (NM_015175, exon 21 of 54) exon (NM_015175, exon 21 of 54) 10224 NM_001365116 23218 Hs.437043 NM_015175 ENSG00000160796 NBEAL2 BDPLT4|GPS neurobeachin like 2 protein-coding chr5-4786 chr5 56357533 56357743 + 10.8 0.000 Intergenic Intergenic 124131 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr16-5688 chr16 74283282 74283492 + 10.8 0.000 Intergenic MER72|LTR|ERV1 -13427 NM_002811 5713 Hs.440604 NM_002811 ENSG00000103035 PSMD7 MOV34|P40|Rpn8|S12 proteasome 26S subunit, non-ATPase 7 protein-coding chrX-2806 chrX 134670547 134670757 + 10.8 0.000 intron (NM_001316887, intron 2 of 3) intron (NM_001316887, intron 2 of 3) -12169 NM_001316889 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr6-2193 chr6 36735827 36736037 + 10.8 0.000 Intergenic Intergenic 21468 NM_001314020 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr5-2260 chr5 24547546 24547756 + 10.8 0.000 intron (NM_001362460, intron 2 of 9) L1MEg|LINE|L1 97327 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr6-5003 chr6 108803530 108803740 + 10.8 0.000 Intergenic L2a|LINE|L2 -44781 NM_001286609 84071 Hs.645481 NM_032131 ENSG00000118690 ARMC2 SPGF38|bA787I22.1 armadillo repeat containing 2 protein-coding chr6-2609 chr6 125781539 125781749 + 10.8 0.000 intron (NM_001199620, intron 1 of 17) intron (NM_001199620, intron 1 of 17) 529 NM_001199619 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr17-2305 chr17 42773941 42774151 + 10.8 0.000 intron (NM_032353, intron 2 of 5) intron (NM_032353, intron 2 of 5) 597 NM_032353 84313 Hs.500165 NM_032353 ENSG00000131475 VPS25 DERP9|EAP20|FAP20 vacuolar protein sorting 25 homolog protein-coding chr1-8343 chr1 54999399 54999609 + 10.8 0.000 intron (NM_057176, intron 1 of 3) intron (NM_057176, intron 1 of 3) 571 NM_057176 7809 Hs.151291 NM_057176 ENSG00000162399 BSND BART|DFNB73 barttin CLCNK type accessory beta subunit protein-coding chr8-6184 chr8 34144841 34145051 + 10.8 0.000 Intergenic Intergenic -544840 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr12-5720 chr12 120791858 120792068 + 10.8 0.000 intron (NM_139015, intron 2 of 10) L1M5|LINE|L1 66137 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr18-2184 chr18 60145883 60146093 + 10.8 0.000 Intergenic Intergenic 226787 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr8-3448 chr8 90505260 90505470 + 10.8 0.000 Intergenic L2a|LINE|L2 100698 NR_104062 101937451 Hs.583685 NR_104062 ENSG00000253799 LINC01030 - long intergenic non-protein coding RNA 1030 ncRNA chr4-4238 chr4 17686345 17686555 + 10.8 0.000 intron (NM_015688, intron 7 of 17) intron (NM_015688, intron 7 of 17) 71809 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chrX-503 chrX 77899228 77899438 + 10.8 0.000 promoter-TSS (NM_001866) promoter-TSS (NM_001866) -135 NM_001866 1349 Hs.522699 NM_001866 ENSG00000131174 COX7B APLCC|LSDMCA2 cytochrome c oxidase subunit 7B protein-coding chr1-11380 chr1 45157551 45157761 + 10.8 0.000 intron (NM_020883, intron 1 of 13) L1ME2z|LINE|L1 48949 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr1-3687 chr1 162846781 162846991 + 10.8 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 21929 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr2-4325 chr2 237717434 237717644 + 10.8 0.000 intron (NM_001137550, intron 3 of 23) intron (NM_001137550, intron 3 of 23) 25334 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr6-8482 chr6 156826066 156826276 + 10.8 0.000 intron (NM_020732, intron 1 of 19) intron (NM_020732, intron 1 of 19) -46440 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr2-12453 chr2 59306170 59306380 + 10.8 0.000 Intergenic Intergenic 88567 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr3-2552 chr3 54071550 54071760 + 10.8 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -50897 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr7-1750 chr7 36967370 36967580 + 10.8 0.000 intron (NM_001206480, intron 16 of 21) intron (NM_001206480, intron 16 of 21) 17637 NM_001039459 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr5-4701 chr5 40386341 40386551 + 10.8 0.000 Intergenic Intergenic -293469 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chrX-2649 chrX 112526010 112526220 + 10.8 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 153823 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr15-1433 chr15 67548104 67548314 + 10.8 0.000 promoter-TSS (NM_001206804) promoter-TSS (NM_001206804) -885 NM_001206804 5607 Hs.114198 NM_002757 ENSG00000137764 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding chr18-1989 chr18 40172207 40172417 + 10.8 0.000 Intergenic L2a|LINE|L2 106026 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr22-2104 chr22 28034938 28035148 + 10.8 0.000 intron (NM_001145418, intron 12 of 22) intron (NM_001145418, intron 12 of 22) -114431 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr5-4459 chr5 6174709 6174919 + 10.8 0.000 Intergenic Intergenic 162478 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr14-2782 chr14 20498928 20499138 + 10.8 0.000 Intergenic Intergenic -11439 NM_001012975 338879 Hs.451057 NM_001012975 ENSG00000182545 RNASE10 RAH1|RNASE9 ribonuclease A family member 10 (inactive) protein-coding chr15-2021 chr15 48674990 48675200 + 10.8 0.000 Intergenic Intergenic -29307 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr17-5067 chr17 3722804 3723014 + 10.8 0.000 promoter-TSS (NM_031965) promoter-TSS (NM_031965) -994 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr16-6438 chr16 56738291 56738501 + 10.8 0.000 intron (NM_014669, intron 1 of 21) intron (NM_014669, intron 1 of 21) 8267 NM_014669 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr1-5152 chr1 159009788 159009998 + 10.8 0.000 promoter-TSS (NM_005531) promoter-TSS (NM_005531) -14 NM_005531 3428 Hs.380250 NM_005531 ENSG00000163565 IFI16 IFNGIP1|PYHIN2 interferon gamma inducible protein 16 protein-coding chr13-1414 chr13 32737889 32738099 + 10.8 0.000 intron (NM_015032, intron 21 of 34) L1ME3F|LINE|L1 151542 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr13-1175 chr13 40193151 40193361 + 10.8 0.000 Intergenic Intergenic 11447 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr8-3697 chr8 18424946 18425156 + 10.8 0.000 Intergenic Intergenic 33769 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr2-8202 chr2 94722630 94722840 + 10.8 0.000 Intergenic Intergenic 38449 NR_038409 90499 Hs.458439 NR_038409 FAM95A - family with sequence similarity 95 member A ncRNA chr9-4566 chr9 89137785 89137995 + 10.8 0.000 intron (NM_016848, intron 1 of 11) intron (NM_016848, intron 1 of 11) 40928 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr21-255 chr21 35226427 35226637 + 10.8 0.000 Intergenic Intergenic -177234 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr2-8875 chr2 176891859 176892069 + 10.8 0.000 Intergenic Intergenic 254210 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr1-3467 chr1 44617615 44617825 + 10.8 0.000 intron (NM_001319957, intron 2 of 13) intron (NM_001319957, intron 2 of 13) 53336 NR_145816 109623472 NR_145816 SNORD145 - small nucleolar RNA, C/D box 145 snoRNA chr17-2149 chr17 42773204 42773414 + 10.8 0.000 promoter-TSS (NM_032353) promoter-TSS (NM_032353) -140 NM_032353 84313 Hs.500165 NM_032353 ENSG00000131475 VPS25 DERP9|EAP20|FAP20 vacuolar protein sorting 25 homolog protein-coding chr22-1769 chr22 28229619 28229829 + 10.8 0.000 intron (NM_001145418, intron 5 of 22) intron (NM_001145418, intron 5 of 22) -230145 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr7-2632 chr7 1674790 1675000 + 10.8 0.000 Intergenic Intergenic -13224 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr2-12066 chr2 31642672 31642882 + 10.8 0.000 Intergenic L1MC4|LINE|L1 -61839 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr3-6074 chr3 51877060 51877270 + 10.8 0.000 Intergenic AluJb|SINE|Alu -1564 NM_001145059 389124 Hs.666604 NM_001145059 ENSG00000214681 IQCF5 - IQ motif containing F5 protein-coding chr11-8104 chr11 44334950 44335160 + 10.8 0.000 Intergenic Intergenic -24916 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr5-5222 chr5 115685518 115685728 + 10.8 0.000 Intergenic Intergenic -12971 NR_104674 102467217 Hs.147738 NR_104674 LOC102467217 - uncharacterized LOC102467217 ncRNA chr1-9120 chr1 17962635 17962845 + 10.8 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -102917 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr15-1318 chr15 74616447 74616657 + 10.8 0.000 intron (NM_001130028, intron 1 of 12) intron (NM_001130028, intron 1 of 12) 1558 NM_001130028 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr14-4358 chr14 24804124 24804334 + 10.8 0.000 Intergenic Intergenic -170039 NR_144343 3002 Hs.1051 NM_004131 ENSG00000100453 GZMB C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B protein-coding chr5-8381 chr5 123582666 123582876 + 10.8 0.000 intron (NM_001044723, intron 5 of 12) intron (NM_001044723, intron 5 of 12) 37354 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr22-1210 chr22 30565417 30565627 + 10.8 0.000 promoter-TSS (NM_001318111) promoter-TSS (NM_001318111) -621 NM_001318110 9514 Hs.17958 NM_004861 ENSG00000128242 GAL3ST1 CST galactose-3-O-sulfotransferase 1 protein-coding chr14-4164 chr14 77932201 77932411 + 10.8 0.000 intron (NR_158988, intron 10 of 10) AluSx1|SINE|Alu 132197 NM_001366488 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr4-8011 chr4 117059018 117059228 + 10.8 0.000 Intergenic Intergenic 26453 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr2-5468 chr2 127943395 127943605 + 10.8 0.000 intron (NM_001330303, intron 18 of 19) Tigger3b|DNA|TcMar-Tigger -57560 NM_001199140 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr11-6561 chr11 71206328 71206538 + 10.8 0.000 intron (NM_012309, intron 1 of 24) intron (NM_012309, intron 1 of 24) 18363 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr2-2860 chr2 164981356 164981566 + 10.8 0.000 Intergenic L2a|LINE|L2 -25936 NM_001351540 151258 Hs.658702 NM_173512 ENSG00000169507 SLC38A11 AVT2 solute carrier family 38 member 11 protein-coding chr20-1575 chr20 3117879 3118089 + 10.8 0.000 intron (NM_001267584, intron 3 of 4) AluSx1|SINE|Alu 11073 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chrX-2956 chrX 155245220 155245430 + 10.8 0.000 Intergenic Intergenic 19166 NM_171998 116442 Hs.632832 NM_171998 ENSG00000155961 RAB39B BGMR|MRX72|WSMN|WSN RAB39B, member RAS oncogene family protein-coding chr2-4047 chr2 111534913 111535123 + 10.8 0.000 Intergenic Intergenic -39857 NR_136166 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr4-1112 chr4 39044469 39044679 + 10.8 0.000 promoter-TSS (NM_001007075) promoter-TSS (NM_001007075) -257 NM_001007075 51088 Hs.272251 NM_015990 ENSG00000109790 KLHL5 - kelch like family member 5 protein-coding chr5-2938 chr5 142254017 142254227 + 10.8 0.000 Intergenic Intergenic 64200 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr8-2336 chr8 17956699 17956909 + 10.8 0.000 TTS (NM_001352660) TTS (NM_001352660) 33816 NR_148032 5108 Hs.491148 NM_006197 ENSG00000078674 PCM1 PTC4|RET/PCM-1 pericentriolar material 1 protein-coding chr20-2396 chr20 18848052 18848262 + 10.8 0.000 Intergenic Intergenic -17954 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr6-2246 chr6 51745465 51745675 + 10.8 0.000 intron (NM_138694, intron 59 of 66) FRAM|SINE|Alu 123700 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr8-2996 chr8 102208450 102208660 + 10.8 0.000 intron (NM_001172477, intron 8 of 8) intron (NM_001172477, intron 8 of 8) 30276 NM_001172477 50484 Hs.512592 NM_015713 ENSG00000048392 RRM2B MTDPS8A|MTDPS8B|P53R2 ribonucleotide reductase regulatory TP53 inducible subunit M2B protein-coding chr6-4248 chr6 7135600 7135810 + 10.8 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 27744 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr11-6256 chr11 57393774 57393984 + 10.8 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -3229 NM_001302927 5553 Hs.512633 NM_002728 ENSG00000186652 PRG2 BMPG|MBP|MBP1|proMBP proteoglycan 2, pro eosinophil major basic protein protein-coding chr13-1530 chr13 26132821 26133031 + 10.8 0.000 intron (NM_183045, intron 5 of 5) MER5A|DNA|hAT-Charlie -73404 NR_146971 107984009 NR_146971 LINC00415 - long intergenic non-protein coding RNA 415 ncRNA chr17-2232 chr17 4448638 4448848 + 10.8 0.000 intron (NM_001320449, intron 5 of 10) L2b|LINE|L2 14803 NM_182538 201305 Hs.657543 NM_182538 ENSG00000182557 SPNS3 SLC62A3 sphingolipid transporter 3 (putative) protein-coding chr1-7792 chr1 47583464 47583674 + 10.8 0.000 Intergenic L3|LINE|CR1 -146252 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr6-5021 chr6 110509817 110510027 + 10.8 0.000 Intergenic MER41B|LTR|ERV1 -33309 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr7-9398 chr7 131418543 131418753 + 10.8 0.000 intron (NM_001321316, intron 8 of 17) intron (NM_001321316, intron 8 of 17) 90772 NM_001321316 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr17-5293 chr17 21529610 21529820 + 10.8 0.000 non-coding (NR_160801, exon 2 of 2) non-coding (NR_160801, exon 2 of 2) 21963 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr1-10898 chr1 207328226 207328436 + 10.8 0.000 intron (NM_001114752, intron 5 of 10) intron (NM_001114752, intron 5 of 10) 6653 NM_001114752 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr2-2831 chr2 102736581 102736791 + 10.8 0.000 promoter-TSS (NM_001321343) promoter-TSS (NM_001321343) 202 NR_136173 84804 Hs.590898 NM_032718 ENSG00000135953 MFSD9 - major facilitator superfamily domain containing 9 protein-coding chr6-4078 chr6 141488486 141488696 + 10.8 0.000 Intergenic LTR16C|LTR|ERVL 600208 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr12-3242 chr12 58557218 58557428 + 10.8 0.000 Intergenic Intergenic -34379 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr2-6490 chr2 173774978 173775188 + 10.8 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 188797 NM_001017371 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr3-4162 chr3 125278516 125278726 + 10.8 0.000 intron (NM_001348436, intron 7 of 8) intron (NM_001348436, intron 7 of 8) -65856 NM_024628 84561 Hs.658514 NM_024628 ENSG00000221955 SLC12A8 CCC9 solute carrier family 12 member 8 protein-coding chr1-7951 chr1 181592286 181592496 + 10.8 0.000 intron (NM_001205293, intron 6 of 47) intron (NM_001205293, intron 6 of 47) 108874 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr14-3537 chr14 104309984 104310194 + 10.8 0.000 Intergenic Intergenic 86505 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr6-4606 chr6 44446886 44447096 + 10.8 0.000 3' UTR (NM_001253, exon 16 of 16) 3' UTR (NM_001253, exon 16 of 16) 11350 NR_039785 100616352 NR_039785 ENSG00000266619 MIR4642 - microRNA 4642 ncRNA chrX-1812 chrX 94937289 94937499 + 10.8 0.000 Intergenic LTR59|LTR|ERV1 125832 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr19-3283 chr19 3401376 3401586 + 10.8 0.000 intron (NM_001245002, intron 2 of 10) intron (NM_001245002, intron 2 of 10) 34898 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr2-6166 chr2 240183310 240183520 + 10.8 0.000 Intergenic Intergenic -42757 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr11-7748 chr11 76534604 76534814 + 10.8 0.000 intron (NM_001300942, intron 15 of 21) intron (NM_001300942, intron 15 of 21) 89684 NM_020193 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding chr7-1684 chr7 131513610 131513820 + 10.8 0.000 intron (NM_001018111, intron 1 of 8) intron (NM_001018111, intron 1 of 8) 42913 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr8-1772 chr8 60558060 60558270 + 10.8 0.000 intron (NM_001242644, intron 1 of 6) intron (NM_001242644, intron 1 of 6) 41178 NM_002865 5862 Hs.369017 NM_002865 ENSG00000104388 RAB2A LHX|RAB2 RAB2A, member RAS oncogene family protein-coding chr10-5256 chr10 67757229 67757439 + 10.8 0.000 Intergenic MLT2B1|LTR|ERVL -61139 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chr4-1887 chr4 7149957 7150167 + 10.8 0.000 Intergenic Intergenic -42476 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr13-1239 chr13 90635913 90636123 + 10.8 0.000 Intergenic Intergenic 142730 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr1-9939 chr1 77100862 77101072 + 10.8 0.000 intron (NM_005482, intron 10 of 10) MLT1E|LTR|ERVL-MaLR 40824 NR_106978 102466995 NR_106978 ENSG00000276081 MIR7156 hsa-mir-7156 microRNA 7156 ncRNA chr14-2864 chr14 32327705 32327915 + 10.8 0.000 Intergenic Intergenic -1488 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr20-2607 chr20 39877091 39877301 + 10.8 0.000 Intergenic Intergenic -127265 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr16-1378 chr16 57938982 57939192 + 10.8 0.000 intron (NM_001297, intron 16 of 32) intron (NM_001297, intron 16 of 32) 32041 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr8-2686 chr8 92052750 92052960 + 10.8 0.000 intron (NM_001198633, intron 1 of 10) intron (NM_001198633, intron 1 of 10) 9779 NM_004349 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr4-2811 chr4 36891148 36891358 + 10.8 0.000 Intergenic L1PA15|LINE|L1 -110526 NR_134669 100508631 Hs.397553 NR_134669 ENSG00000261761 LINC02616 - long intergenic non-protein coding RNA 2616 ncRNA chr2-10466 chr2 217695132 217695342 + 10.8 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 61356 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr2-8014 chr2 69118797 69119007 + 10.8 0.000 intron (NM_032208, intron 10 of 17) intron (NM_032208, intron 10 of 17) 15220 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr11-4375 chr11 75402152 75402362 + 10.8 0.000 intron (NM_001260507, intron 2 of 5) intron (NM_001260507, intron 2 of 5) 1866 NR_000005 6079 Hs.689081 NR_000005 ENSG00000206941 SNORD15A RNU15A|SNORNA|U15A small nucleolar RNA, C/D box 15A snoRNA chr17-5033 chr17 1914596 1914806 + 10.8 0.000 Intergenic Intergenic 84696 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr9-3247 chr9 11366850 11367060 + 10.8 0.000 Intergenic MER45C|DNA|hAT-Tip100 753749 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr16-3060 chr16 57477092 57477302 + 10.8 0.000 intron (NM_001369618, intron 2 of 7) intron (NM_001369618, intron 2 of 7) 2560 NM_001330556 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr21-716 chr21 33884478 33884688 + 10.8 0.000 intron (NM_001331010, intron 35 of 38) intron (NM_001331010, intron 35 of 38) 31221 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr18-1153 chr18 11361226 11361436 + 10.8 0.000 Intergenic MER39|LTR|ERV1 -93147 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr10-5998 chr10 124970423 124970633 + 10.8 0.000 intron (NM_017580, intron 2 of 8) AluJb|SINE|Alu 28405 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr19-3877 chr19 33628677 33628887 + 10.8 0.000 intron (NM_001127896, intron 1 of 3) intron (NM_001127896, intron 1 of 3) 6829 NM_001127895 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr20-1993 chr20 49302938 49303148 + 10.8 0.000 Intergenic Intergenic 22360 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr12-7014 chr12 32444999 32445209 + 10.8 0.000 intron (NM_001370298, intron 1 of 16) intron (NM_001370298, intron 1 of 16) -40868 NM_001304481 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr2-4956 chr2 182129186 182129396 + 10.8 0.000 non-coding (NR_048566, exon 6 of 6) non-coding (NR_048566, exon 6 of 6) 112772 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr1-5305 chr1 219566226 219566436 + 10.8 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -9007 NR_135822 102723886 Hs.525963 NR_135822 LYPLAL1-AS1 - LYPLAL1 antisense RNA 1 ncRNA chr6-4329 chr6 16757014 16757224 + 10.8 0.000 intron (NM_000332, intron 1 of 8) intron (NM_000332, intron 1 of 8) 3065 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr9-1501 chr9 137016732 137016942 + 10.8 0.000 intron (NM_212533, intron 19 of 48) intron (NM_212533, intron 19 of 48) -10627 NM_207511 401563 Hs.522509 NM_207511 C9orf139 - chromosome 9 open reading frame 139 protein-coding chr7-4114 chr7 44807728 44807938 + 10.8 0.000 Intergenic AluSq2|SINE|Alu 11152 NM_001300981 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr3-5197 chr3 71892689 71892899 + 10.8 0.000 Intergenic Intergenic -107646 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr1-4626 chr1 161733650 161733860 + 10.8 0.000 Intergenic Kanga1b|DNA|TcMar-Tc2 11102 NM_001288830 127943 Hs.517422 NM_001002901 ENSG00000162746 FCRLB FCRL2|FCRLM2|FCRLY|FREB-2|FREB2|FcRY Fc receptor like B protein-coding chr1-6679 chr1 51897692 51897902 + 10.8 0.000 Intergenic Intergenic -18860 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr14-2985 chr14 51576826 51577036 + 10.8 0.000 intron (NM_001042481, intron 2 of 14) MIRc|SINE|MIR 23021 NR_047477 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr19-3933 chr19 48806703 48806913 + 10.8 0.000 intron (NM_001190, intron 2 of 10) intron (NM_001190, intron 2 of 10) 4221 NM_001164773 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr13-2406 chr13 43046680 43046890 + 10.8 0.000 intron (NM_013238, intron 1 of 5) LTR17|LTR|ERV1 23199 NM_013238 29103 Hs.438830 NM_013238 ENSG00000120675 DNAJC15 DNAJD1|HSD18|MCJ DnaJ heat shock protein family (Hsp40) member C15 protein-coding chr8-3316 chr8 30254247 30254457 + 10.8 0.000 Intergenic MER1A|DNA|hAT-Charlie 97983 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr9-3244 chr9 3932764 3932974 + 10.8 0.000 intron (NM_001042413, intron 5 of 10) intron (NM_001042413, intron 5 of 10) 34223 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr10-1732 chr10 113475202 113475412 + 10.8 0.000 Intergenic Intergenic -75524 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr12-3206 chr12 54525499 54525709 + 10.8 0.000 intron (NM_001184976, intron 20 of 30) intron (NM_001184976, intron 20 of 30) -23789 NM_001288768 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding chr10-1488 chr10 133334991 133335201 + 10.8 0.000 intron (NM_001321617, intron 1 of 5) CpG 1800 NM_015722 50632 Hs.148680 NM_015722 ENSG00000130643 CALY DRD1IP|NSG3 calcyon neuron specific vesicular protein protein-coding chr3-2145 chr3 121995399 121995609 + 10.8 0.000 intron (NM_001199800, intron 3 of 5) intron (NM_001199800, intron 3 of 5) 26743 NM_001199800 286676 Hs.98484 NM_175924 ENSG00000145103 ILDR1 DFNB42|ILDR1alpha|ILDR1alpha'|ILDR1beta immunoglobulin like domain containing receptor 1 protein-coding chr3-6673 chr3 130445426 130445636 + 10.8 0.000 intron (NM_001278298, intron 36 of 40) HERVK11-int|LTR|ERVK 100015 NR_022012 256076 Hs.205403 NM_153264 ENSG00000172752 COL6A5 COL29A1|VWA4 collagen type VI alpha 5 chain protein-coding chr8-1512 chr8 69500822 69501032 + 10.8 0.000 intron (NR_156415, intron 2 of 21) intron (NR_156415, intron 2 of 21) 8080 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr5-5288 chr5 124163249 124163459 + 10.8 0.000 intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 275166 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr6-5723 chr6 143517721 143517931 + 10.8 0.000 Intergenic (TATA)n|Simple_repeat|Simple_repeat -6106 NM_032020 2519 Hs.17680 NM_032020 ENSG00000001036 FUCA2 dJ20N2.5 alpha-L-fucosidase 2 protein-coding chr3-1406 chr3 141486641 141486851 + 10.8 0.000 promoter-TSS (NM_001303246) promoter-TSS (NM_001303246) -281 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr10-2656 chr10 93659780 93659990 + 10.8 0.000 intron (NM_006204, intron 18 of 21) intron (NM_006204, intron 18 of 21) 42687 NM_001347715 118924 Hs.586650 NM_145246 ENSG00000148690 FRA10AC1 C10orf4|F26C11.1-like|FRA10A FRA10A associated CGG repeat 1 protein-coding chr2-3391 chr2 26476292 26476502 + 10.8 0.000 intron (NM_194322, intron 4 of 28) intron (NM_194322, intron 4 of 28) 1727 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr10-1870 chr10 93060739 93060949 + 10.8 0.000 promoter-TSS (NM_183374) promoter-TSS (NM_183374) 46 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr1-15111 chr1 100855183 100855393 + 10.8 0.000 Intergenic L1PA16|LINE|L1 39554 NM_001033025 2135 Hs.357637 NM_001439 ENSG00000162694 EXTL2 EXTR2 exostosin like glycosyltransferase 2 protein-coding chr7-2142 chr7 44107246 44107456 + 10.8 0.000 intron (NM_001129, intron 2 of 20) intron (NM_001129, intron 2 of 20) 3006 NM_001129 165 Hs.439463 NM_001129 ENSG00000106624 AEBP1 ACLP AE binding protein 1 protein-coding chr13-1560 chr13 32589397 32589607 + 10.8 0.000 intron (NM_015032, intron 1 of 34) intron (NM_015032, intron 1 of 34) 3050 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr5-2485 chr5 145531432 145531642 + 10.8 0.000 Intergenic Intergenic 303805 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr9-4203 chr9 36598383 36598593 + 10.8 0.000 intron (NM_001256691, intron 4 of 15) intron (NM_001256691, intron 4 of 15) 25593 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr17-2923 chr17 47252639 47252849 + 10.8 0.000 Intergenic L2c|LINE|L2 -1098 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chr15-3449 chr15 92109316 92109526 + 10.8 0.000 intron (NR_135775, intron 4 of 10) intron (NR_135775, intron 4 of 10) 255117 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr6-3609 chr6 102466963 102467173 + 10.8 0.000 Intergenic Intergenic 1068083 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr3-6938 chr3 159789927 159790137 + 10.8 0.000 intron (NM_001197113, intron 5 of 10) intron (NM_001197113, intron 5 of 10) -21420 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr9-5600 chr9 114804716 114804926 + 10.8 0.000 intron (NM_005118, intron 1 of 3) intron (NM_005118, intron 1 of 3) 1218 NM_005118 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr4-2165 chr4 94275033 94275243 + 10.8 0.000 intron (NM_001128429, intron 14 of 23) intron (NM_001128429, intron 14 of 23) 21829 NM_001254949 56916 Hs.410406 NM_020159 ENSG00000163104 SMARCAD1 ADERM|BASNS|ETL1|HEL1|HRZ SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding chr6-1594 chr6 36334587 36334797 + 10.8 0.000 intron (NM_001010903, intron 1 of 11) intron (NM_001010903, intron 1 of 11) 2196 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chr2-4400 chr2 75640635 75640845 + 10.8 0.000 Intergenic Intergenic -6043 NM_014763 9801 Hs.44024 NM_014763 ENSG00000115364 MRPL19 L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15 mitochondrial ribosomal protein L19 protein-coding chr11-5933 chr11 15249637 15249847 + 10.8 0.000 Intergenic Intergenic 100640 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr6-2181 chr6 34912820 34913030 + 10.8 0.000 intron (NM_015245, intron 1 of 23) intron (NM_015245, intron 1 of 23) 23670 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chrX-1784 chrX 78710102 78710312 + 10.8 0.000 Intergenic L2b|LINE|L2 -37502 NM_001278000 2846 Hs.522701 NM_005296 ENSG00000147145 LPAR4 GPR23|LPA4|P2RY9|P2Y5-LIKE|P2Y9 lysophosphatidic acid receptor 4 protein-coding chrX-2688 chrX 118720944 118721154 + 10.8 0.000 Intergenic Intergenic -6557 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr6-5000 chr6 108652671 108652881 + 10.8 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 91859 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr2-8668 chr2 149274282 149274492 + 10.8 0.000 Intergenic Intergenic -55598 NM_001195685 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr9-3213 chr9 133904605 133904815 + 10.8 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 87614 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr2-2664 chr2 219294778 219294988 + 10.8 0.000 promoter-TSS (NR_029688) promoter-TSS (NR_029688) -683 NR_029688 406944 NR_029688 ENSG00000207647 MIR153-1 MIRN153-1|mir-153-1 microRNA 153-1 ncRNA chr12-3321 chr12 85109867 85110077 + 10.8 0.000 intron (NM_001079910, intron 15 of 26) MIR|SINE|MIR 73621 NM_001079910 84125 Hs.402200 NM_032165 ENSG00000133640 LRRIQ1 - leucine rich repeats and IQ motif containing 1 protein-coding chr1-4668 chr1 209675217 209675427 + 10.8 0.000 promoter-TSS (NR_134511) promoter-TSS (NR_134511) -73 NR_134511 101930114 Hs.663934 NR_134509 ENSG00000227591 HSD11B1-AS1 - HSD11B1 antisense RNA 1 ncRNA chr5-4639 chr5 34699062 34699272 + 10.8 0.000 intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 11608 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr7-2899 chr7 130959941 130960151 + 10.8 0.000 intron (NR_109852, intron 4 of 5) MER20B|DNA|hAT-Charlie 46582 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr3-6459 chr3 106380221 106380431 + 10.8 0.000 Intergenic L1MC4a|LINE|L1 -510925 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr16-3518 chr16 24686171 24686381 + 10.8 0.000 intron (NM_001351850, intron 2 of 23) intron (NM_001351850, intron 2 of 23) -15214 NR_122072 400511 Hs.592028 NR_122072 ENSG00000224310 LINC01567 LOCCS long intergenic non-protein coding RNA 1567 ncRNA chr5-3308 chr5 123987763 123987973 + 10.8 0.000 Intergenic L1PA10|LINE|L1 442451 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr15-1340 chr15 40340302 40340512 + 10.8 0.000 intron (NM_207380, intron 1 of 10) intron (NM_207380, intron 1 of 10) 560 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 CCDC9B C15orf52 coiled-coil domain containing 9B protein-coding chr10-3040 chr10 123913057 123913267 + 10.8 0.000 Intergenic Intergenic -21355 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr12-1713 chr12 11432014 11432224 + 10.8 0.000 intron (NR_148969, intron 3 of 4) intron (NR_148969, intron 3 of 4) -36552 NM_006248 653247 Hs.654486 NM_006248 ENSG00000121335 PRB2 IB-9|PRPPRB1|Ps|cP7 proline rich protein BstNI subfamily 2 protein-coding chr3-1557 chr3 9912516 9912726 + 10.8 0.000 intron (NM_153483, intron 13 of 16) Charlie22a|DNA|hAT-Charlie -4453 NM_001203264 84818 Hs.129959 NM_032732 ENSG00000163702 IL17RC CANDF9|IL17-RL|IL17RL interleukin 17 receptor C protein-coding chr4-2153 chr4 85778768 85778978 + 10.8 0.000 promoter-TSS (NM_001042669) promoter-TSS (NM_001042669) 75 NM_001042669 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr21-227 chr21 34889887 34890097 + 10.8 0.000 intron (NM_001754, intron 3 of 8) CpG -1293 NM_001122607 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr16-4241 chr16 20293768 20293978 + 10.8 0.000 Intergenic AluJr|SINE|Alu 33640 NM_001502 2813 Hs.53985 NM_001502 ENSG00000169347 GP2 ZAP75 glycoprotein 2 protein-coding chr3-2840 chr3 25695805 25696015 + 10.8 0.000 Intergenic Intergenic -30971 NR_039644 100616477 NR_039644 ENSG00000283971 MIR4442 mir-4442 microRNA 4442 ncRNA chr6-4937 chr6 100692057 100692267 + 10.8 0.000 intron (NM_006828, intron 13 of 41) CR1-3_Croc|LINE|CR1 189167 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr4-1450 chr4 125891830 125892040 + 10.8 0.000 Intergenic Intergenic 384676 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr5-7667 chr5 54045264 54045474 + 10.8 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) -93770 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr9-4512 chr9 68949348 68949558 + 10.8 0.000 intron (NM_001278253, intron 13 of 13) intron (NM_001278253, intron 13 of 13) 26388 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chrX-2367 chrX 68420633 68420843 + 10.8 0.000 intron (NM_002547, intron 2 of 24) intron (NM_002547, intron 2 of 24) 12757 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr20-1938 chr20 21549973 21550183 + 10.8 0.000 Intergenic Intergenic -19946 NR_109880 101929625 Hs.542413 NR_109880 LINC01727 - long intergenic non-protein coding RNA 1727 ncRNA chr12-8159 chr12 121448902 121449112 + 10.8 0.000 intron (NM_001005366, intron 13 of 22) intron (NM_001005366, intron 13 of 22) -4655 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr6-4851 chr6 86474791 86475001 + 10.8 0.000 Intergenic HERVS71-int|LTR|ERV1 -462632 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr15-2937 chr15 47601645 47601855 + 10.8 0.000 intron (NM_001198999, intron 4 of 19) intron (NM_001198999, intron 4 of 19) -115755 NM_001358352 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr6-3407 chr6 84341529 84341739 + 10.8 0.000 Intergenic L1PB1|LINE|L1 -113991 NM_001286206 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding chr7-2837 chr7 101503084 101503294 + 10.8 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 65817 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr4-1143 chr4 39045203 39045413 + 10.8 0.000 intron (NM_001171654, intron 1 of 10) CpG 477 NM_001171654 51088 Hs.272251 NM_015990 ENSG00000109790 KLHL5 - kelch like family member 5 protein-coding chr11-4221 chr11 64048667 64048877 + 10.8 0.000 intron (NM_014067, intron 3 of 10) MIR|SINE|MIR -55118 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr5-805 chr5 74865918 74866128 + 10.8 0.000 non-coding (NR_134288, exon 1 of 1) non-coding (NR_134288, exon 1 of 1) 130 NR_134288 441086 Hs.653007 NR_134288 LOC441086 - uncharacterized LOC441086 ncRNA chr10-4140 chr10 78745220 78745430 + 10.8 0.000 Intergenic Intergenic 322123 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr1-10467 chr1 161953818 161954028 + 10.8 0.000 intron (NM_007348, intron 15 of 15) intron (NM_007348, intron 15 of 15) 70542 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr17-5774 chr17 61859824 61860034 + 10.8 0.000 intron (NM_032043, intron 2 of 19) intron (NM_032043, intron 2 of 19) 3630 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding chr1-9638 chr1 46582247 46582457 + 10.8 0.000 intron (NM_198973, intron 3 of 11) intron (NM_198973, intron 3 of 11) 21916 NM_001135553 8569 Hs.371594 NM_003684 ENSG00000079277 MKNK1 MNK1 MAPK interacting serine/threonine kinase 1 protein-coding chrX-3934 chrX 9829622 9829832 + 10.8 0.000 intron (NM_001649, intron 1 of 9) intron (NM_001649, intron 1 of 9) 43298 NM_001649 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr10-5495 chr10 80595990 80596200 + 10.8 0.000 intron (NM_207372, intron 4 of 6) intron (NM_207372, intron 4 of 6) -53702 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr2-6111 chr2 207616903 207617113 + 10.8 0.000 intron (NM_001330134, intron 3 of 3) L2|LINE|L2 7980 NM_145280 151194 Hs.664764 NM_145280 ENSG00000144401 METTL21A FAM119A|HCA557b|HSPA-KMT methyltransferase like 21A protein-coding chr8-5344 chr8 15950717 15950927 + 10.8 0.000 Intergenic Intergenic 235450 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr1-4605 chr1 151714016 151714226 + 10.8 0.000 intron (NM_007185, intron 2 of 12) intron (NM_007185, intron 2 of 12) 2682 NM_007185 11189 Hs.26047 NM_007185 ENSG00000159409 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP Elav-like family member 3 protein-coding chr11-5845 chr11 8989593 8989803 + 10.8 0.000 intron (NM_020645, intron 1 of 6) intron (NM_020645, intron 1 of 6) 14303 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chr9-6298 chr9 135724434 135724644 + 10.8 0.000 intron (NM_020822, intron 2 of 30) (CATT)n|Simple_repeat|Simple_repeat 22354 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr10-1762 chr10 31262680 31262890 + 10.8 0.000 Intergenic Intergenic -55632 NM_001323638 6935 Hs.124503 NM_030751 ENSG00000148516 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding chr9-4598 chr9 98752569 98752779 + 10.8 0.000 intron (NM_173551, intron 12 of 14) MIR|SINE|MIR -43739 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr7-2965 chr7 1440695 1440905 + 10.8 0.000 intron (NM_182924, intron 7 of 16) intron (NM_182924, intron 7 of 16) 18670 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr2-2646 chr2 173963320 173963530 + 10.8 0.000 intron (NM_003111, intron 3 of 6) intron (NM_003111, intron 3 of 6) 455 NM_001017371 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr6-7360 chr6 47973682 47973892 + 10.8 0.000 intron (NM_207499, intron 2 of 2) intron (NM_207499, intron 2 of 2) 94902 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr14-2404 chr14 57497442 57497652 + 10.8 0.000 Intergenic Intergenic -3690 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr1-8510 chr1 154398189 154398399 + 10.8 0.000 Intergenic Intergenic -6899 NM_001206866 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr6-2997 chr6 43298300 43298510 + 10.8 0.000 exon (NM_006672, exon 1 of 10) exon (NM_006672, exon 1 of 10) 145 NM_153320 10864 Hs.485438 NM_006672 ENSG00000137204 SLC22A7 NLT|OAT2|hOAT11 solute carrier family 22 member 7 protein-coding chr16-4471 chr16 56548219 56548429 + 10.8 0.000 Intergenic Intergenic -16749 NM_032935 84560 Hs.567624 NM_032935 ENSG00000102891 MT4 MT-4|MT-IV|MTIV metallothionein 4 protein-coding chr10-4895 chr10 19870918 19871128 + 10.8 0.000 intron (NM_032812, intron 1 of 13) MIRb|SINE|MIR 54591 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr3-3464 chr3 168398651 168398861 + 10.8 0.000 intron (NR_021485, intron 3 of 15) intron (NR_021485, intron 3 of 15) 149234 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr7-5277 chr7 22414127 22414337 + 10.8 0.000 Intergenic MamRep38|DNA|hAT -57078 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr10-4455 chr10 73287121 73287331 + 10.8 0.000 intron (NM_001367801, intron 20 of 27) L1MEg|LINE|L1 34485 NR_134459 414245 Hs.568860 NR_038373 ENSG00000227540 DNAJC9-AS1 C10orf103|bA537A6.3 DNAJC9 antisense RNA 1 ncRNA chr12-5985 chr12 94805818 94806028 + 10.8 0.000 Intergenic Intergenic -28475 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr6-4664 chr6 52551958 52552168 + 10.8 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 24997 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr19-3199 chr19 48740678 48740888 + 10.8 0.000 promoter-TSS (NM_017805) promoter-TSS (NM_017805) -173 NM_017805 54922 Hs.233955 NM_017805 ENSG00000105538 RASIP1 RAIN Ras interacting protein 1 protein-coding chr16-1575 chr16 87201097 87201307 + 10.8 0.000 Intergenic MIRb|SINE|MIR -10913 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr5-8067 chr5 94376876 94377086 + 10.8 0.000 intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) 241623 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr18-1187 chr18 25929844 25930054 + 10.8 0.000 Intergenic Intergenic 160664 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr2-11214 chr2 160667422 160667632 + 10.8 0.000 Intergenic Intergenic -173720 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr8-3391 chr8 61092481 61092691 + 10.8 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -124838 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr12-4649 chr12 45221222 45221432 + 10.8 0.000 intron (NM_001025356, intron 1 of 19) intron (NM_001025356, intron 1 of 19) 5232 NM_001142679 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr22-2839 chr22 44145044 44145254 + 10.8 0.000 intron (NM_001243386, intron 8 of 11) MIRb|SINE|MIR -27807 NM_001137605 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr3-4910 chr3 189099188 189099398 + 10.8 0.000 Intergenic Intergenic -72678 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr1-15942 chr1 188049632 188049842 + 10.8 0.000 Intergenic Intergenic 606109 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr2-9142 chr2 210203858 210204068 + 10.8 0.000 intron (NM_001608, intron 7 of 10) intron (NM_001608, intron 7 of 10) 21484 NM_001608 33 Hs.471277 NM_001608 ENSG00000115361 ACADL ACAD4|LCAD acyl-CoA dehydrogenase long chain protein-coding chr6-6008 chr6 106585606 106585816 + 10.8 0.000 intron (NM_032730, intron 7 of 8) intron (NM_032730, intron 7 of 8) 43787 NM_032730 84816 Hs.155839 NM_032730 ENSG00000130347 RTN4IP1 NIMP|OPA10 reticulon 4 interacting protein 1 protein-coding chr15-2407 chr15 65053813 65054023 + 10.8 0.000 TTS (NM_178859) TTS (NM_178859) 8531 NM_178859 123264 Hs.27018 NM_178859 ENSG00000186198 SLC51B OSTB|OSTBETA solute carrier family 51 beta subunit protein-coding chr13-1184 chr13 44703490 44703700 + 10.8 0.000 Intergenic Intergenic 63226 NR_149082 106144541 Hs.578031 NR_149082 LINC00407 - long intergenic non-protein coding RNA 407 ncRNA chr1-3461 chr1 40097101 40097311 + 10.8 0.000 promoter-TSS (NM_001142604) promoter-TSS (NM_001142604) 46 NM_001363695 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding chr14-2536 chr14 21801204 21801414 + 10.8 0.000 Intergenic L1ME3Cz|LINE|L1 -130292 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr11-6342 chr11 63207501 63207711 + 10.8 0.000 intron (NM_199352, intron 4 of 8) LTR15|LTR|ERV1 22046 NM_199352 387601 Hs.332119 NM_199352 ENSG00000196600 SLC22A25 HIMTP|UST6 solute carrier family 22 member 25 protein-coding chr1-8805 chr1 2022680 2022890 + 10.8 0.000 intron (NM_000815, intron 1 of 8) intron (NM_000815, intron 1 of 8) 3440 NM_000815 2563 Hs.113882 NM_000815 ENSG00000187730 GABRD EIG10|EJM7|GEFSP5 gamma-aminobutyric acid type A receptor delta subunit protein-coding chr18-1212 chr18 36017679 36017889 + 10.8 0.000 intron (NM_001303411, intron 7 of 7) intron (NM_001303411, intron 7 of 7) 45105 NM_031446 83608 Hs.37883 NM_031446 ENSG00000141428 C18orf21 HsT3108|PNAS-124|PNAS-131|XTP13 chromosome 18 open reading frame 21 protein-coding chr3-4186 chr3 128455874 128456084 + 10.8 0.000 Intergenic Intergenic -7615 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr4-6468 chr4 145602442 145602652 + 10.8 0.000 Intergenic L2b|LINE|L2 -16838 NM_172250 166785 Hs.452864 NM_172250 ENSG00000151611 MMAA cblA metabolism of cobalamin associated A protein-coding chr1-6554 chr1 30961898 30962108 + 10.8 0.000 intron (NM_001020658, intron 14 of 21) intron (NM_001020658, intron 14 of 21) 6234 NR_003066 692200 NR_003066 SNORD103C HBII-251|SNORD85 small nucleolar RNA, C/D box 103C snoRNA chr8-2597 chr8 53953908 53954118 + 10.8 0.000 intron (NM_001286673, intron 3 of 4) intron (NM_001286673, intron 3 of 4) 68435 NM_201437 6917 Hs.491745 NM_006756 ENSG00000187735 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A1 protein-coding chr18-1502 chr18 80104027 80104237 + 10.8 0.000 Intergenic MER89|LTR|ERV1 -5130 NM_014913 22850 Hs.131915 NM_014913 ENSG00000101544 ADNP2 ZNF508 ADNP homeobox 2 protein-coding chr3-3066 chr3 129062488 129062698 + 10.8 0.000 TTS (NM_000174) TTS (NM_000174) 1826 NM_000174 2815 Hs.1144 NM_000174 ENSG00000169704 GP9 CD42a|GPIX glycoprotein IX platelet protein-coding chr9-4434 chr9 16413606 16413816 + 10.8 0.000 3' UTR (NM_001317940, exon 6 of 6) 3' UTR (NM_001317940, exon 6 of 6) -137398 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr6-4235 chr6 6041938 6042148 + 10.8 0.000 Intergenic LTR16A1|LTR|ERVL -34438 NM_001278710 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding chr14-737 chr14 34971524 34971734 + 10.8 0.000 intron (NR_151701, intron 1 of 4) intron (NR_151701, intron 1 of 4) 10937 NR_151701 100506157 NR_151701 SRP54-AS1 - SRP54 antisense RNA 1 (head to head) ncRNA chr9-4011 chr9 34961881 34962091 + 10.8 0.000 intron (NM_015297, intron 1 of 7) intron (NM_015297, intron 1 of 7) 3701 NR_136308 23349 Hs.7989 NM_015297 ENSG00000122733 PHF24 - PHD finger protein 24 protein-coding chrX-2876 chrX 145833899 145834109 + 10.8 0.000 Intergenic Intergenic 12656 NM_001144006 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr2-7714 chr2 33694291 33694501 + 10.8 0.000 Intergenic L1PREC2|LINE|L1 -12490 NR_126403 104355287 Hs.636582 NR_126403 ENSG00000228262 LINC01317 - long intergenic non-protein coding RNA 1317 ncRNA chr6-8184 chr6 133083531 133083741 + 10.8 0.000 Intergenic Intergenic -4444 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr1-9348 chr1 28787293 28787503 + 10.8 0.000 Intergenic AluJr|SINE|Alu -24772 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chr21-838 chr21 45914984 45915194 + 10.8 0.000 intron (NM_001348241, intron 11 of 16) intron (NM_001348241, intron 11 of 16) -57881 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr8-6859 chr8 100032691 100032901 + 10.8 0.000 intron (NM_015668, intron 14 of 27) L1PA6|LINE|L1 28214 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr6-5244 chr6 136322280 136322490 + 10.8 0.000 Intergenic Intergenic -32534 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chrX-4714 chrX 88160840 88161050 + 10.8 0.000 Intergenic Intergenic -586280 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr4-3746 chr4 81677357 81677567 + 10.8 0.000 Intergenic AluSz6|SINE|Alu -205555 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr8-2764 chr8 116527539 116527749 + 10.8 0.000 Intergenic Intergenic -124456 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr2-4973 chr2 198219515 198219725 + 10.8 0.000 Intergenic Intergenic 155477 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr11-2030 chr11 65169308 65169518 + 10.8 0.000 promoter-TSS (NM_001008778) promoter-TSS (NM_001008778) -741 NM_001008778 387778 Hs.450642 NM_001008778 ENSG00000204710 SPDYC RINGOC|Ringo2 speedy/RINGO cell cycle regulator family member C protein-coding chr7-9263 chr7 123968087 123968297 + 10.8 0.000 intron (NM_003117, intron 5 of 6) MER66A|LTR|ERV1 -26430 NR_133947 105375483 Hs.435972 NR_133947 ENSG00000241345 LOC105375483 - uncharacterized LOC105375483 ncRNA KI270442.1-12 KI270442.1 177528 177738 + 10.8 0.000 NA NA NA NA chr15-3682 chr15 40285728 40285938 + 10.8 0.000 Intergenic Intergenic -3247 NM_001190479 100131244 Hs.711376 NM_001190479 ENSG00000230778 ANKRD63 - ankyrin repeat domain 63 protein-coding chr2-9090 chr2 203952172 203952382 + 10.8 0.000 intron (NM_012092, intron 1 of 4) intron (NM_012092, intron 1 of 4) 15529 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr7-2208 chr7 106925366 106925576 + 10.8 0.000 Intergenic MER8|DNA|TcMar-Tigger 59992 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr1-6619 chr1 42628109 42628319 + 10.8 0.000 intron (NM_001080850, intron 11 of 16) THE1A-int|LTR|ERVL-MaLR -30209 NM_001330510 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr1-5287 chr1 212600568 212600778 + 10.8 0.000 intron (NM_001030287, intron 1 of 3) L2b|LINE|L2 -8088 NM_001206484 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chr19-2745 chr19 40192105 40192315 + 10.8 0.000 exon (NM_002446, exon 1 of 10) exon (NM_002446, exon 1 of 10) 784 NM_002446 4294 Hs.466743 NM_002446 ENSG00000130758 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding chr2-9828 chr2 151763041 151763251 + 10.8 0.000 Intergenic Intergenic -28659 NM_001164508 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr14-3180 chr14 70981724 70981934 + 10.8 0.000 intron (NM_001308160, intron 6 of 33) intron (NM_001308160, intron 6 of 33) 74370 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr22-796 chr22 50347596 50347806 + 10.8 0.000 intron (NM_001242899, intron 1 of 22) intron (NM_001242899, intron 1 of 22) 4374 NM_001242898 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr1-6663 chr1 48529135 48529345 + 10.8 0.000 Intergenic Intergenic -57032 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr17-5763 chr17 60710127 60710337 + 10.8 0.000 intron (NM_001330413, intron 5 of 25) intron (NM_001330413, intron 5 of 25) 32381 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr8-3422 chr8 72508985 72509195 + 10.8 0.000 Intergenic Intergenic -28135 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr20-1407 chr20 31653155 31653365 + 10.8 0.000 Intergenic L1ME4b|LINE|L1 15348 NM_032609 84701 Hs.277101 NM_032609 ENSG00000131055 COX4I2 COX4|COX4-2|COX4B|COX4L2|COXIV-2|dJ857M17.2 cytochrome c oxidase subunit 4I2 protein-coding chr8-1206 chr8 90645395 90645605 + 10.8 0.000 exon (NM_001146273, exon 1 of 2) exon (NM_001146273, exon 1 of 2) 405 NM_001146273 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr4-4303 chr4 27765626 27765836 + 10.8 0.000 Intergenic L2b|LINE|L2 548252 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr5-2249 chr5 14806462 14806672 + 10.8 0.000 intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 19445 NR_039780 100616271 NR_039780 ENSG00000264792 MIR4637 - microRNA 4637 ncRNA chr2-8436 chr2 120108909 120109119 + 10.8 0.000 TTS (NR_138472) TTS (NR_138472) 95937 NM_001184938 57669 Hs.369232 NM_020909 ENSG00000115109 EPB41L5 BE37|YMO1|YRT erythrocyte membrane protein band 4.1 like 5 protein-coding chr2-5221 chr2 46253064 46253274 + 10.8 0.000 Intergenic Intergenic -44238 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr2-7253 chr2 230268949 230269159 + 10.8 0.000 intron (NM_001278453, intron 9 of 23) intron (NM_001278453, intron 9 of 23) 43318 NM_001005176 11262 Hs.632549 NM_007237 ENSG00000079263 SP140 LYSP100|LYSP100-A|LYSP100-B SP140 nuclear body protein protein-coding chr7-5783 chr7 77854942 77855152 + 10.8 0.000 intron (NM_001366089, intron 2 of 18) L1MA3|LINE|L1 14917 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr19-3764 chr19 416674 416884 + 10.8 0.000 3' UTR (NM_012435, exon 13 of 13) 3' UTR (NM_012435, exon 13 of 13) -7632 NM_001136263 126567 Hs.223770 NM_001136263 ENSG00000183186 C2CD4C FAM148C|KIAA1957|NLF3 C2 calcium dependent domain containing 4C protein-coding chr5-1140 chr5 132180156 132180366 + 10.8 0.000 Intergenic Intergenic -4615 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA chr2-7897 chr2 55100529 55100739 + 10.8 0.000 intron (NM_001321904, intron 1 of 9) intron (NM_001321904, intron 1 of 9) 37197 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr14-1440 chr14 83875122 83875332 + 10.8 0.000 Intergenic Intergenic 1232595 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr2-4632 chr2 169695688 169695898 + 10.8 0.000 intron (NM_001199288, intron 2 of 3) LTR40b|LTR|ERVL 1324 NM_001008489 493911 Hs.745233 NM_001008489 ENSG00000144362 PHOSPHO2 - phosphatase, orphan 2 protein-coding chr6-4313 chr6 15831303 15831513 + 10.8 0.000 Intergenic Intergenic -168350 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr7-2874 chr7 116642440 116642650 + 10.8 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -27725 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr12-2319 chr12 132541033 132541243 + 10.8 0.000 intron (NM_001142641, intron 4 of 16) intron (NM_001142641, intron 4 of 16) -40859 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr18-1211 chr18 35841732 35841942 + 10.8 0.000 Intergenic Intergenic 63089 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr3-6238 chr3 66930253 66930463 + 10.8 0.000 Intergenic Intergenic -67949 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr5-5391 chr5 134736437 134736647 + 10.8 0.000 Intergenic Intergenic -2006 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr10-4712 chr10 422110 422320 + 10.8 0.000 intron (NM_014974, intron 5 of 36) intron (NM_014974, intron 5 of 36) -206349 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr6-1888 chr6 145564856 145565066 + 10.8 0.000 Intergenic Intergenic 121916 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr1-6467 chr1 19740850 19741060 + 10.8 0.000 intron (NM_001349112, intron 9 of 14) intron (NM_001349112, intron 9 of 14) 58394 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr1-6214 chr1 212012108 212012318 + 10.8 0.000 intron (NM_015434, intron 4 of 19) intron (NM_015434, intron 4 of 19) -23340 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr4-1730 chr4 2009013 2009223 + 10.8 0.000 promoter-TSS (NM_005663) promoter-TSS (NM_005663) -144 NM_005663 7469 Hs.21771 NM_005663 ENSG00000185049 NELFA NELF-A|P/OKcl.15|WHSC2 negative elongation factor complex member A protein-coding chrX-3909 chrX 9176356 9176566 + 10.8 0.000 Intergenic Intergenic -142334 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding chr1-7124 chr1 202539318 202539528 + 10.8 0.000 promoter-TSS (NM_001197131) promoter-TSS (NM_001197131) -691 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr12-2705 chr12 113312562 113312772 + 10.8 0.000 intron (NM_001358345, intron 11 of 15) intron (NM_001358345, intron 11 of 15) 21144 NR_106820 102465457 NR_106820 ENSG00000274822 MIR6762 hsa-mir-6762 microRNA 6762 ncRNA chr10-3683 chr10 103515450 103515660 + 10.8 0.000 intron (NR_120676, intron 1 of 2) intron (NR_120676, intron 1 of 2) 1887 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr12-3691 chr12 591475 591685 + 10.8 0.000 intron (NM_016533, intron 1 of 3) intron (NM_016533, intron 1 of 3) -5094 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr8-2157 chr8 41308600 41308810 + 10.8 0.000 exon (NM_003012, exon 1 of 3) exon (NM_003012, exon 1 of 3) 768 NM_003012 6422 Hs.213424 NM_003012 ENSG00000104332 SFRP1 FRP|FRP-1|FRP1|FrzA|SARP2 secreted frizzled related protein 1 protein-coding chr1-3848 chr1 32984492 32984702 + 10.8 0.000 Intergenic Intergenic -19788 NM_001127361 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chr6-2658 chr6 2237061 2237271 + 10.8 0.000 intron (NM_001500, intron 1 of 10) intron (NM_001500, intron 1 of 10) 8439 NM_001500 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr2-3879 chr2 40360744 40360954 + 10.8 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 69455 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr16-4084 chr16 2116195 2116405 + 10.8 0.000 intron (NM_000296, intron 8 of 45) intron (NM_000296, intron 8 of 45) -9547 NR_106775 102465429 NR_106775 ENSG00000284008 MIR6511B1 MIR6511B-1|hsa-mir-6511b-1 microRNA 6511b-1 ncRNA chr7-2377 chr7 31882353 31882563 + 10.8 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 187949 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr4-4434 chr4 52596382 52596592 + 10.8 0.000 3' UTR (NM_022832, exon 9 of 9) 3' UTR (NM_022832, exon 9 of 9) 60052 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding chr8-1962 chr8 61607579 61607789 + 10.8 0.000 intron (NM_004318, intron 14 of 24) intron (NM_004318, intron 14 of 24) 82127 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr14-1819 chr14 48748633 48748843 + 10.8 0.000 Intergenic Intergenic 837642 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr3-5643 chr3 11187030 11187240 + 10.8 0.000 intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) 32642 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr1-7031 chr1 174153509 174153719 + 10.8 0.000 intron (NR_121197, intron 3 of 3) L1ME1|LINE|L1 5673 NR_121197 102724601 Hs.563791 NR_121197 ENSG00000227373 RABGAP1L-DT - RABGAP1L divergent transcript ncRNA chr8-5632 chr8 102848015 102848225 + 10.8 0.000 intron (NM_001363010, intron 2 of 11) Tigger3a|DNA|TcMar-Tigger 16043 NM_001301668 51582 Hs.459106 NM_015878 ENSG00000155096 AZIN1 AZI|AZI1|AZIA1|OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding chrX-5088 chrX 126661027 126661237 + 10.8 0.000 Intergenic Intergenic -108318 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr11-5866 chr11 10348914 10349124 + 10.8 0.000 intron (NR_103765, intron 2 of 3) ERVL-E-int|LTR|ERVL 40706 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA chr2-7925 chr2 59294506 59294716 + 10.8 0.000 Intergenic Intergenic 76903 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr2-6440 chr2 154393412 154393622 + 10.8 0.000 intron (NM_052917, intron 9 of 12) intron (NM_052917, intron 9 of 12) 63921 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr2-1631 chr2 241636541 241636751 + 10.8 0.000 intron (NM_015963, intron 1 of 5) CpG 512 NM_015963 51078 Hs.435759 NM_015963 ENSG00000176946 THAP4 CGI-36|Nb(III)|PP238 THAP domain containing 4 protein-coding chr12-5404 chr12 121334799 121335009 + 10.8 0.000 intron (NM_001137559, intron 7 of 16) intron (NM_001137559, intron 7 of 16) 17507 NM_016237 51433 Hs.7101 NM_016237 ENSG00000089053 ANAPC5 APC5 anaphase promoting complex subunit 5 protein-coding chr8-2580 chr8 43055471 43055681 + 10.8 0.000 promoter-TSS (NM_002027) promoter-TSS (NM_002027) -723 NR_033698 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr1-3958 chr1 116151997 116152207 + 10.8 0.000 Intergenic CpG 40347 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr2-8203 chr2 94741091 94741301 + 10.8 0.000 Intergenic Intergenic 19988 NR_038409 90499 Hs.458439 NR_038409 FAM95A - family with sequence similarity 95 member A ncRNA chr11-4291 chr11 67194849 67195059 + 10.8 0.000 intron (NR_027473, intron 5 of 20) L4_B_Mam|LINE|RTE-X -45060 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr10-5602 chr10 93598176 93598386 + 10.8 0.000 intron (NM_006744, intron 4 of 5) MIR|SINE|MIR 2954 NM_006744 5950 Hs.50223 NM_006744 ENSG00000138207 RBP4 MCOPCB10|RDCCAS retinol binding protein 4 protein-coding chr5-4990 chr5 80933048 80933258 + 10.8 0.000 Intergenic Intergenic -27210 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding chr1-4908 chr1 39822096 39822306 + 10.8 0.000 Intergenic Intergenic 33225 NR_135805 101929536 Hs.552820 NR_135805 ENSG00000261798 LOC101929536 - uncharacterized LOC101929536 ncRNA chr1-2137 chr1 904596 904806 + 10.8 0.000 Intergenic CpG 14991 NR_026874 100130417 Hs.200644 NM_175912 ENSG00000223764 LINC02593 - long intergenic non-protein coding RNA 2593 ncRNA chr7-5189 chr7 9815161 9815371 + 10.8 0.000 Intergenic (AATT)n|Simple_repeat|Simple_repeat 180996 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr12-3181 chr12 51864234 51864444 + 10.8 0.000 Intergenic CpG 16116 NR_135803 105369971 Hs.505582 NR_135803 ENSG00000259887 LOC105369971 - uncharacterized LOC105369971 ncRNA chr13-2684 chr13 88136648 88136858 + 10.8 0.000 Intergenic Intergenic -6114 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr3-4518 chr3 110135107 110135317 + 10.8 0.000 Intergenic LTR1F1|LTR|ERV1 532384 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chrX-1106 chrX 14382388 14382598 + 10.8 0.000 Intergenic MamRep605|LTR?|LTR? 138228 NR_110506 286480 Hs.567831 NR_110506 UBE2E4P UbcM2 ubiquitin conjugating enzyme E2 E4 pseudogene pseudo chr7-6520 chr7 31576682 31576892 + 10.8 0.000 intron (NM_194300, intron 6 of 12) intron (NM_194300, intron 6 of 12) 23785 NM_194300 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr2-4288 chr2 232598770 232598980 + 10.8 0.000 Intergenic AluSx|SINE|Alu -7182 NM_001243252 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr18-739 chr18 54913009 54913219 + 10.8 0.000 intron (NM_001143829, intron 10 of 11) MIRb|SINE|MIR 44934 NM_001143829 80323 Hs.120790 NM_025214 ENSG00000166510 CCDC68 SE57-1 coiled-coil domain containing 68 protein-coding chr13-2323 chr13 33040718 33040928 + 10.8 0.000 intron (NM_004795, intron 1 of 4) intron (NM_004795, intron 1 of 4) 24400 NM_004795 9365 Hs.524953 NM_004795 ENSG00000133116 KL HFTC3 klotho protein-coding chr17-3527 chr17 69314785 69314995 + 10.8 0.000 5' UTR (NM_018672, exon 1 of 38) 5' UTR (NM_018672, exon 1 of 38) 743 NM_018672 23461 Hs.731824 NM_018672 ENSG00000154265 ABCA5 ABC13|EST90625|HTC3 ATP binding cassette subfamily A member 5 protein-coding chr18-2756 chr18 282263 282473 + 10.8 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -14321 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr13-2610 chr13 75552394 75552604 + 10.8 0.000 intron (NM_006002, intron 2 of 8) intron (NM_006002, intron 2 of 8) 2749 NM_006002 7347 Hs.162241 NM_006002 ENSG00000118939 UCHL3 UCH-L3 ubiquitin C-terminal hydrolase L3 protein-coding chr5-3692 chr5 931672 931882 + 10.8 0.000 Intergenic Intergenic 38893 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr1-9888 chr1 68693931 68694141 + 10.8 0.000 Intergenic AluSx1|SINE|Alu -196954 NM_017779 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding chr1-8330 chr1 53332976 53333186 + 10.8 0.000 intron (NR_131923, intron 2 of 2) MLT1F|LTR|ERVL-MaLR 4848 NR_131923 105378732 Hs.118609 NR_131923 ENSG00000225675 LINC01771 - long intergenic non-protein coding RNA 1771 ncRNA chr20-2248 chr20 1557768 1557978 + 10.8 0.000 promoter-TSS (NM_178460) promoter-TSS (NM_178460) -168 NM_178460 128646 Hs.729560 NM_178460 ENSG00000125900 SIRPD PTPNS1L2|dJ576H24.4 signal regulatory protein delta protein-coding chr10-2655 chr10 93482460 93482670 + 10.8 0.000 promoter-TSS (NM_133337) promoter-TSS (NM_133337) -231 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr6-3564 chr6 54541453 54541663 + 10.8 0.000 Intergenic Intergenic 233117 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr8-3408 chr8 68265384 68265594 + 10.8 0.000 Intergenic L2c|LINE|L2 -64884 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr3-11090 chr3 185335825 185336035 + 10.8 0.000 intron (NM_001242317, intron 2 of 12) intron (NM_001242317, intron 2 of 12) -27206 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr11-3689 chr11 1288644 1288854 + 10.8 0.000 exon (NM_001318516, exon 3 of 5) exon (NM_001318516, exon 3 of 5) 14041 NM_001318514 54472 Hs.368527 NM_019009 ENSG00000078902 TOLLIP IL-1RAcPIP toll interacting protein protein-coding chr6-4476 chr6 36222933 36223143 + 10.8 0.000 intron (NM_015695, intron 10 of 12) intron (NM_015695, intron 10 of 12) -20130 NM_173676 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr22-1621 chr22 29778756 29778966 + 10.8 0.000 Intergenic L1ME4a|LINE|L1 11492 NM_001003684 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding chr6-2085 chr6 149210431 149210641 + 10.8 0.000 Intergenic Intergenic -7388 NR_125861 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr3-5322 chr3 127825804 127826014 + 10.8 0.000 Intergenic L1MD2|LINE|L1 -2659 NM_001003794 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr1-9461 chr1 35524306 35524516 + 10.8 0.000 intron (NM_024874, intron 2 of 20) LTR80A|LTR|ERVL 32992 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr2-7807 chr2 44853241 44853451 + 10.8 0.000 Intergenic Intergenic 85542 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr3-3444 chr3 139671718 139671928 + 10.8 0.000 intron (NM_178177, intron 1 of 4) intron (NM_178177, intron 1 of 4) 6149 NM_001320510 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr2-6698 chr2 25057053 25057263 + 10.8 0.000 intron (NM_001319099, intron 1 of 22) MIR|SINE|MIR 14695 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr2-6199 chr2 17672939 17673149 + 10.8 0.000 intron (NM_024624, intron 24 of 26) L1ME3|LINE|L1 80766 NM_001142286 79677 Hs.526728 NM_024624 ENSG00000163029 SMC6 SMC-6|SMC6L1|hSMC6 structural maintenance of chromosomes 6 protein-coding chr3-6148 chr3 57402508 57402718 + 10.8 0.000 intron (NM_001366028, intron 43 of 73) L1MA4A|LINE|L1 -109928 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chr4-2912 chr4 86848258 86848468 + 10.8 0.000 intron (NM_197965, intron 1 of 5) intron (NM_197965, intron 1 of 5) 1021 NM_197965 345274 Hs.452996 NM_197965 ENSG00000145283 SLC10A6 SOAT solute carrier family 10 member 6 protein-coding chr2-9164 chr2 212557884 212558094 + 10.8 0.000 Intergenic L2c|LINE|L2 -19187 NM_005235 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr2-12481 chr2 61760761 61760971 + 10.8 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 93194 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr5-4937 chr5 75362370 75362580 + 10.8 0.000 TTS (NM_000859) TTS (NM_000859) 25255 NM_000859 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding chr13-1478 chr13 101492585 101492795 + 10.8 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 2738 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr17-2438 chr17 8728433 8728643 + 10.8 0.000 Intergenic Intergenic 16298 NM_144681 146849 Hs.121438 NM_144681 ENSG00000161973 CCDC42 CCDC42A coiled-coil domain containing 42 protein-coding chr18-3484 chr18 71796126 71796336 + 10.8 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -14005 NR_126324 102724913 NR_126324 ENSG00000265352 LINC01899 - long intergenic non-protein coding RNA 1899 ncRNA chr2-8317 chr2 106817333 106817543 + 10.8 0.000 intron (NM_001142352, intron 5 of 5) L1M1|LINE|L1 68590 NR_136313 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr12-3351 chr12 91492521 91492731 + 10.8 0.000 Intergenic Intergenic -309809 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr13-2062 chr13 52859889 52860099 + 10.8 0.000 Intergenic Intergenic -11354 NM_002590 5100 Hs.19492 NM_002590 ENSG00000136099 PCDH8 ARCADLIN|PAPC protocadherin 8 protein-coding chr10-5785 chr10 104775417 104775627 + 10.8 0.000 intron (NM_014978, intron 1 of 26) intron (NM_014978, intron 1 of 26) -109306 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr14-1742 chr14 64612105 64612315 + 10.8 0.000 Intergenic Plat_L3|LINE|CR1 62249 NM_172365 145376 Hs.144696 NM_172365 ENSG00000165807 PPP1R36 C14orf50 protein phosphatase 1 regulatory subunit 36 protein-coding chrX-1959 chrX 8897755 8897965 + 10.8 0.000 Intergenic Intergenic -96477 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr5-2852 chr5 73199432 73199642 + 10.8 0.000 intron (NR_134291, intron 1 of 2) intron (NR_134291, intron 1 of 2) 2424 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr7-5470 chr7 41357082 41357292 + 10.8 0.000 Intergenic Intergenic 255583 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr11-7096 chr11 122599340 122599550 + 10.8 0.000 Intergenic Intergenic -56277 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr2-2053 chr2 174778450 174778660 + 10.8 0.000 Intergenic Intergenic -14083 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr8-6779 chr8 93798632 93798842 + 10.8 0.000 intron (NR_024522, intron 20 of 28) intron (NR_024522, intron 20 of 28) 43843 NR_024522 91147 Hs.116240 NM_153704 ENSG00000164953 TMEM67 JBTS6|MECKELIN|MKS3|NPHP11|TNEM67 transmembrane protein 67 protein-coding chr6-5094 chr6 118968882 118969092 + 10.8 0.000 intron (NM_001288576, intron 13 of 15) THE1C|LTR|ERVL-MaLR -33825 NM_153255 254394 Hs.279008 NM_017696 ENSG00000111877 MCM9 C6orf61|MCMDC1|ODG4|dJ329L24.1|dJ329L24.3 minichromosome maintenance 9 homologous recombination repair factor protein-coding chr5-3851 chr5 125852859 125853069 + 10.8 0.000 Intergenic Intergenic -326613 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr1-8189 chr1 20944750 20944960 + 10.8 0.000 intron (NM_003760, intron 8 of 31) AluJb|SINE|Alu 43577 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr6-3064 chr6 73214838 73215048 + 10.8 0.000 Intergenic Intergenic 10553 NM_001126063 100129128 Hs.663639 NM_001126063 ENSG00000256980 KHDC1L - KH domain containing 1 like protein-coding chr12-7789 chr12 97181661 97181871 + 10.8 0.000 Intergenic MER8|DNA|TcMar-Tigger 274300 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr11-8664 chr11 3605226 3605436 + 10.8 0.000 Intergenic MIR3|SINE|MIR -21129 NR_002720 7221 Hs.131910 NR_002720 ENSG00000182048 TRPC2 - transient receptor potential cation channel subfamily C member 2 (pseudogene) pseudo chr13-2781 chr13 99937502 99937712 + 10.8 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) 19558 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr5-4357 chr5 168654279 168654489 + 10.8 0.000 Intergenic Intergenic -52543 NR_130737 101927969 Hs.661903 NR_130737 LOC101927969 - uncharacterized LOC101927969 ncRNA chr9-3852 chr9 130967583 130967793 + 10.8 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -28441 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr5-5546 chr5 147427996 147428206 + 10.8 0.000 intron (NM_001197294, intron 1 of 13) intron (NM_001197294, intron 1 of 13) 25591 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr1-3577 chr1 3292424 3292634 + 10.8 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -162136 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr9-3572 chr9 73535246 73535456 + 10.8 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 383486 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr3-5152 chr3 57315233 57315443 + 10.8 0.000 intron (NM_001366028, intron 65 of 73) intron (NM_001366028, intron 65 of 73) -22653 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chr1-7736 chr1 31415518 31415728 + 10.8 0.000 intron (NM_001199039, intron 1 of 10) MIRb|SINE|MIR 1810 NM_018565 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr7-2532 chr7 66034613 66034823 + 10.8 0.000 Intergenic L1MC4|LINE|L1 -41101 NM_001024944 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr11-5767 chr11 3856293 3856503 + 10.8 0.000 TTS (NR_039835) TTS (NR_039835) 336 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr19-3105 chr19 10769219 10769429 + 10.8 0.000 intron (NM_001005362, intron 2 of 19) intron (NM_001005362, intron 2 of 19) -10930 NR_039903 100616425 NR_039903 ENSG00000265879 MIR4748 mir-4748 microRNA 4748 ncRNA chr3-6617 chr3 126582933 126583143 + 10.8 0.000 Intergenic L2c|LINE|L2 -24106 NM_152533 152065 Hs.178210 NM_152533 ENSG00000180697 C3orf22 - chromosome 3 open reading frame 22 protein-coding chr4-1509 chr4 75672585 75672795 + 10.8 0.000 intron (NM_203504, intron 1 of 10) CpG 469 NM_012297 9908 Hs.303676 NM_012297 ENSG00000138757 G3BP2 - G3BP stress granule assembly factor 2 protein-coding chr9-8141 chr9 101971040 101971250 + 10.8 0.000 Intergenic Intergenic -232565 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr21-292 chr21 46662200 46662410 + 10.8 0.000 intron (NM_001535, intron 9 of 10) intron (NM_001535, intron 9 of 10) 26631 NM_206962 3275 Hs.154163 NM_001535 ENSG00000160310 PRMT2 HRMT1L1 protein arginine methyltransferase 2 protein-coding chr20-1719 chr20 40010244 40010454 + 10.8 0.000 Intergenic Intergenic 5888 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr11-5573 chr11 104069122 104069332 + 10.8 0.000 intron (NM_025208, intron 1 of 6) L1MC4|LINE|L1 32587 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr11-6058 chr11 31338400 31338610 + 10.8 0.000 intron (NM_181807, intron 1 of 8) intron (NM_181807, intron 1 of 8) 31234 NM_001367979 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr5-2507 chr5 154642597 154642807 + 10.8 0.000 Intergenic HERVK-int|LTR|ERVK -40277 NM_001367713 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr19-1433 chr19 3398598 3398808 + 10.8 0.000 intron (NM_001245002, intron 2 of 10) CpG 32120 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr5-2826 chr5 40956293 40956503 + 10.8 0.000 intron (NM_000587, intron 10 of 17) Tigger9b|DNA|TcMar-Tigger 46901 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 - complement C7 protein-coding KI270731.1-1 KI270731.1 4878 5088 + 10.8 0.000 NA NA NA NA chr14-1276 chr14 74847168 74847378 + 10.8 0.000 Intergenic Intergenic 16561 NM_001243007 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding chr6-3784 chr6 19605489 19605699 + 10.8 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 155773 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA chr7-3905 chr7 118264780 118264990 + 10.8 0.000 Intergenic Intergenic 40181 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr2-6398 chr2 125942705 125942915 + 10.8 0.000 Intergenic LTR12C|LTR|ERV1 175175 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr11-3708 chr11 9775441 9775651 + 10.8 0.000 intron (NR_036485, intron 1 of 2) MER21C|LTR|ERVL -16013 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chr16-3214 chr16 85384518 85384728 + 10.8 0.000 Intergenic Intergenic -78298 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr1-4354 chr1 88799612 88799822 + 10.8 0.000 intron (NM_001320707, intron 8 of 20) LTR33|LTR|ERVL 91850 NM_001514 2959 Hs.481852 NM_001514 ENSG00000137947 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding chr9-3373 chr9 124467382 124467592 + 10.8 0.000 Intergenic Intergenic 39912 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr18-1161 chr18 12336934 12337144 + 10.8 0.000 intron (NM_006796, intron 16 of 16) intron (NM_006796, intron 16 of 16) 28798 NM_032525 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr6-2092 chr6 153537512 153537722 + 10.8 0.000 Intergenic ERVL-E-int|LTR|ERVL -406335 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr13-2034 chr13 45933378 45933588 + 10.8 0.000 Intergenic Intergenic -81730 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr11-3240 chr11 72459056 72459266 + 10.8 0.000 Intergenic LTR16D|LTR|ERVL -24477 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr3-2971 chr3 74613141 74613351 + 10.8 0.000 Intergenic Intergenic -92106 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr9-5493 chr9 102658473 102658683 + 10.8 0.000 Intergenic Intergenic 138941 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA chr9-6884 chr9 87116241 87116451 + 10.8 0.000 Intergenic Intergenic -31121 NR_036691 494127 Hs.626316 NR_036691 LOC494127 - NFYC pseudogene pseudo chr7-2758 chr7 51141374 51141584 + 10.8 0.000 intron (NM_015198, intron 5 of 12) intron (NM_015198, intron 5 of 12) 175330 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr6-6598 chr6 145186728 145186938 + 10.8 0.000 Intergenic Intergenic 500044 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr16-2464 chr16 86142729 86142939 + 10.8 0.000 Intergenic Intergenic -53347 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr7-3889 chr7 111313007 111313217 + 10.8 0.000 intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) 221985 NM_018334 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr15-1407 chr15 44340520 44340730 + 10.8 0.000 intron (NM_177974, intron 6 of 8) MER5A|DNA|hAT-Charlie 51906 NR_157849 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chrX-1099 chrX 10769829 10770039 + 10.8 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) 63749 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr3-1041 chr3 183178942 183179152 + 10.8 0.000 3' UTR (NM_015078, exon 30 of 30) 3' UTR (NM_015078, exon 30 of 30) -16313 NM_014398 27074 Hs.518448 NM_014398 ENSG00000078081 LAMP3 CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403 lysosomal associated membrane protein 3 protein-coding chr9-2230 chr9 137722659 137722869 + 10.8 0.000 intron (NM_001354263, intron 3 of 26) intron (NM_001354263, intron 3 of 26) 65642 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr15-1571 chr15 72317006 72317216 + 10.8 0.000 intron (NM_052840, intron 1 of 12) L2b|LINE|L2 2835 NM_001172684 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr1-6685 chr1 53131135 53131345 + 10.8 0.000 intron (NR_109858, intron 2 of 10) intron (NR_109858, intron 2 of 10) 11398 NM_006671 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr22-2283 chr22 35417613 35417823 + 10.8 0.000 intron (NM_006739, intron 12 of 16) intron (NM_006739, intron 12 of 16) 17578 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|MGORS8|P1-CDC46 minichromosome maintenance complex component 5 protein-coding chr9-3147 chr9 104993817 104994027 + 10.8 0.000 Intergenic MIRb|SINE|MIR -65767 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr12-4789 chr12 54059225 54059435 + 10.8 0.000 intron (NR_026655, intron 1 of 1) intron (NR_026655, intron 1 of 1) 1076 NR_026655 440101 Hs.350378 NR_026655 ENSG00000248265 FLJ12825 - uncharacterized LOC440101 ncRNA chr2-9047 chr2 199975351 199975561 + 10.8 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -19965 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chrX-1619 chrX 112469549 112469759 + 10.8 0.000 Intergenic Intergenic 210284 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr2-9451 chr2 234323386 234323596 + 10.8 0.000 Intergenic Intergenic 131104 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr17-5269 chr17 19837387 19837597 + 10.8 0.000 intron (NM_014683, intron 10 of 26) intron (NM_014683, intron 10 of 26) 30444 NM_001142610 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr10-2572 chr10 71043401 71043611 + 10.8 0.000 Intergenic Intergenic 104453 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr1-9458 chr1 35454723 35454933 + 10.8 0.000 intron (NM_024874, intron 10 of 20) intron (NM_024874, intron 10 of 20) -88751 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr20-3779 chr20 21125182 21125392 + 10.8 0.000 promoter-TSS (NM_001352434) promoter-TSS (NM_001352434) -688 NM_001276389 55857 Hs.187635 NM_018474 ENSG00000088970 KIZ C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69 kizuna centrosomal protein protein-coding chr6-4094 chr6 147049103 147049313 + 10.8 0.000 intron (NR_034115, intron 5 of 10) L2a|LINE|L2 -109717 NR_132442 106182249 Hs.575390 NR_132442 ENSG00000196634 LUADT1 - lung adenocarcinoma associated transcript 1 ncRNA chr18-572 chr18 63253609 63253819 + 10.8 0.000 intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 65666 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr3-5376 chr3 150299294 150299504 + 10.8 0.000 intron (NR_110186, intron 1 of 3) intron (NR_110186, intron 1 of 3) 24348 NR_110187 101928022 Hs.555199 NR_110186 LINC01214 - long intergenic non-protein coding RNA 1214 ncRNA chr2-4358 chr2 562806 563016 + 10.8 0.000 TTS (NR_136168) TTS (NR_136168) 4710 NR_136168 105373352 NR_136168 LOC105373352 - uncharacterized LOC105373352 ncRNA chr11-8769 chr11 9390525 9390735 + 10.8 0.000 intron (NM_006391, intron 1 of 24) intron (NM_006391, intron 1 of 24) 5978 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chr12-3783 chr12 54147625 54147835 + 10.8 0.000 Intergenic Intergenic 21659 NR_026656 400043 Hs.19193 NR_026656 ENSG00000250742 LINC02381 - long intergenic non-protein coding RNA 2381 ncRNA chr22-2619 chr22 32622525 32622735 + 10.8 0.000 intron (NM_003490, intron 6 of 13) MIR3|SINE|MIR 147393 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr10-5632 chr10 96333681 96333891 + 10.8 0.000 intron (NM_001017520, intron 9 of 10) L1MA7|LINE|L1 23373 NM_001284326 93377 Hs.12449 NM_033207 ENSG00000197430 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding chr2-3852 chr2 34702188 34702398 + 10.8 0.000 intron (NR_126404, intron 1 of 2) HERVH-int|LTR|ERV1 24736 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr10-9048 chr10 124459963 124460173 + 10.8 0.000 Intergenic L2c|LINE|L2 -1755 NM_001167880 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr7-6030 chr7 108512789 108512999 + 10.8 0.000 intron (NM_001256010, intron 3 of 9) intron (NM_001256010, intron 3 of 9) 13241 NM_001256009 50640 Hs.617340 NM_015723 ENSG00000135241 PNPLA8 IPLA2-2|IPLA2G|MMLA|PNPLA-gamma|iPLA2gamma patatin like phospholipase domain containing 8 protein-coding chr9-4623 chr9 109806862 109807072 + 10.8 0.000 intron (NM_053016, intron 1 of 6) L2a|LINE|L2 26769 NM_053016 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr18-1593 chr18 39892458 39892668 + 10.8 0.000 Intergenic LTR16A2|LTR|ERVL 50854 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr10-8163 chr10 71103583 71103793 + 10.8 0.000 Intergenic Intergenic -108882 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr22-1872 chr22 41256227 41256437 + 10.8 0.000 intron (NM_001317930, intron 8 of 15) intron (NM_001317930, intron 8 of 15) -3282 NR_106949 102466758 NR_106949 ENSG00000274552 MIR6889 hsa-mir-6889 microRNA 6889 ncRNA chr1-7253 chr1 228347382 228347592 + 10.8 0.000 intron (NM_052843, intron 75 of 80) intron (NM_052843, intron 75 of 80) 49622 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr19-1673 chr19 1978204 1978414 + 10.8 0.000 exon (NM_001319, exon 3 of 12) exon (NM_001319, exon 3 of 12) -23760 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr5-3565 chr5 61827306 61827516 + 10.8 0.000 Intergenic Intergenic -91713 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr4-4629 chr4 80004534 80004744 + 10.8 0.000 intron (NM_001286781, intron 12 of 16) MLT1D|LTR|ERVL-MaLR 68590 NM_058172 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF ANTXR cell adhesion molecule 2 protein-coding chr11-3441 chr11 64849592 64849802 + 10.8 0.000 Intergenic Intergenic -5044 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr4-1678 chr4 148023726 148023936 + 10.8 0.000 intron (NM_024605, intron 19 of 22) intron (NM_024605, intron 19 of 22) 241236 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr6-2274 chr6 74018537 74018747 + 10.8 0.000 Intergenic L1M1|LINE|L1 -50809 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr3-7887 chr3 129162868 129163078 + 10.8 0.000 Intergenic Intergenic -1743 NM_001204890 100534599 Hs.512661 NM_001204890 ENSG00000261796 ISY1-RAB43 ISY1 ISY1-RAB43 readthrough protein-coding chr3-2782 chr3 188241229 188241439 + 10.8 0.000 intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 15929 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr7-3967 chr7 134174347 134174557 + 10.8 0.000 intron (NM_001365700, intron 7 of 15) intron (NM_001365700, intron 7 of 15) 47112 NM_001365701 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr3-4312 chr3 168448399 168448609 + 10.8 0.000 intron (NR_021485, intron 3 of 15) intron (NR_021485, intron 3 of 15) -103350 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr2-4306 chr2 235268758 235268968 + 10.8 0.000 Intergenic Intergenic -225180 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chrX-4257 chrX 39838009 39838219 + 10.8 0.000 TTS (NR_039763) TTS (NR_039763) 553 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chrX-2036 chrX 16997286 16997496 + 10.8 0.000 intron (NM_001080975, intron 1 of 17) intron (NM_001080975, intron 1 of 17) 50733 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr6-3128 chr6 107064647 107064857 + 10.8 0.000 TTS (NM_001367314) TTS (NM_001367314) 36553 NM_001142470 51250 Hs.486084 NM_016487 ENSG00000130349 C6orf203 HSPC230|PRED31 chromosome 6 open reading frame 203 protein-coding chr15-2090 chr15 65385593 65385803 + 10.8 0.000 intron (NM_020962, intron 18 of 19) intron (NM_020962, intron 18 of 19) -7696 NM_004884 9543 Hs.128292 NM_004884 ENSG00000174498 IGDCC3 HsT18880|PUNC immunoglobulin superfamily DCC subclass member 3 protein-coding chr2-9417 chr2 232137463 232137673 + 10.8 0.000 intron (NR_046476, intron 8 of 20) intron (NR_046476, intron 8 of 20) -35085 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chrX-1191 chrX 66012892 66013102 + 10.8 0.000 Intergenic Intergenic -5873 NR_029637 407008 NR_029637 ENSG00000284567 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA chr12-2317 chr12 124971668 124971878 + 10.8 0.000 intron (NM_032656, intron 7 of 26) intron (NM_032656, intron 7 of 26) 17358 NM_032656 57647 Hs.107382 NM_032656 ENSG00000150990 DHX37 DDX37|Dhr1 DEAH-box helicase 37 protein-coding chr20-2724 chr20 49115435 49115645 + 10.8 0.000 intron (NM_004602, intron 13 of 13) AluSg7|SINE|Alu 69228 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr11-3321 chr11 110716618 110716828 + 10.8 0.000 Intergenic Intergenic -3534 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr10-7737 chr10 32438349 32438559 + 10.8 0.000 intron (NR_120660, intron 2 of 2) ERV3-16A3_I-int|LTR|ERVL 7602 NR_120660 101929431 Hs.639819 NR_120660 LOC101929431 - uncharacterized LOC101929431 ncRNA chr9-4943 chr9 15082347 15082557 + 10.8 0.000 Intergenic MIRb|SINE|MIR 89125 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr5-1252 chr5 15502252 15502462 + 10.8 0.000 intron (NM_001278317, intron 1 of 3) intron (NM_001278317, intron 1 of 3) 919 NM_001278317 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr17-1906 chr17 67390513 67390723 + 10.8 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) 13337 NM_181671 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein cytoplasmic 1 protein-coding chr9-7260 chr9 5293771 5293981 + 10.8 0.000 Intergenic L1PA7|LINE|L1 10352 NM_001329191 6019 Hs.127032 NM_005059 ENSG00000107014 RLN2 H2|H2-RLX|RLXH2|bA12D24.1.1|bA12D24.1.2 relaxin 2 protein-coding chr1-11098 chr1 229482149 229482359 + 10.8 0.000 intron (NM_018230, intron 12 of 25) intron (NM_018230, intron 12 of 25) 26087 NM_018230 55746 Hs.12457 NM_018230 ENSG00000069248 NUP133 GAMOS8|NPHS18|hNUP133 nucleoporin 133 protein-coding chr3-1500 chr3 127791374 127791584 + 10.8 0.000 intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 31403 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr9-1589 chr9 95062574 95062784 + 10.8 0.000 intron (NM_032823, intron 12 of 14) intron (NM_032823, intron 12 of 14) -2671 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr11-4427 chr11 93740764 93740974 + 10.8 0.000 promoter-TSS (NM_001351989) promoter-TSS (NM_001351989) 626 NM_024116 79101 Hs.355750 NM_024116 ENSG00000166012 TAF1D JOSD3|RAFI41|TAF(I)41|TAFI41 TATA-box binding protein associated factor, RNA polymerase I subunit D protein-coding chr3-3285 chr3 126668973 126669183 + 10.8 0.000 intron (NR_034158, intron 4 of 4) intron (NR_034158, intron 4 of 4) 6997 NR_034158 255330 Hs.145435 NM_174935 ENSG00000198284 NUP210P1 C3orf46 nucleoporin 210 pseudogene 1 pseudo chr5-2212 chr5 174827766 174827976 + 10.8 0.000 Intergenic L1ME3G|LINE|L1 76137 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr14-1408 chr14 60757852 60758062 + 10.8 0.000 intron (NM_001177963, intron 1 of 6) L2c|LINE|L2 23196 NM_001177963 4331 Hs.509523 NM_002431 ENSG00000020426 MNAT1 CAP35|MAT1|RNF66|TFB3 MNAT1 component of CDK activating kinase protein-coding chr4-1999 chr4 1057452 1057662 + 10.8 0.000 intron (NM_001366919, intron 10 of 11) MER58A|DNA|hAT-Charlie 45093 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr22-2016 chr22 36224617 36224827 + 10.8 0.000 Intergenic LTR16E2|LTR|ERVL 14805 NM_030882 23780 Hs.474740 NM_030882 ENSG00000128335 APOL2 APOL-II|APOL3 apolipoprotein L2 protein-coding chrX-2019 chrX 15760107 15760317 + 10.8 0.000 intron (NR_160544, intron 5 of 11) intron (NR_160544, intron 5 of 11) 21942 NM_007220 11238 Hs.653287 NM_007220 ENSG00000169239 CA5B CA-VB|CAVB carbonic anhydrase 5B protein-coding chr6-3073 chr6 75275254 75275464 + 10.8 0.000 intron (NM_018247, intron 1 of 6) L2a|LINE|L2 9433 NM_001143958 55754 Hs.108530 NM_018247 ENSG00000112697 TMEM30A C6orf67|CDC50A transmembrane protein 30A protein-coding chr6-3768 chr6 15874886 15875096 + 10.8 0.000 Intergenic L1PA17|LINE|L1 -211933 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr16-6314 chr16 48352071 48352281 + 10.8 0.000 3' UTR (NM_001300948, exon 14 of 14) 3' UTR (NM_001300948, exon 14 of 14) 13711 NM_001006610 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr2-4933 chr2 169776833 169777043 + 10.8 0.000 Intergenic Intergenic -21933 NM_003142 6741 Hs.632535 NM_003142 ENSG00000138385 SSB LARP3|La|La/SSB small RNA binding exonuclease protection factor La protein-coding chr9-5237 chr9 77582088 77582298 + 10.8 0.000 intron (NM_004297, intron 1 of 6) intron (NM_004297, intron 1 of 6) 66129 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr7-4076 chr7 14377946 14378156 + 10.8 0.000 intron (NM_001350717, intron 20 of 24) intron (NM_001350717, intron 20 of 24) -386626 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr4-7214 chr4 42216504 42216714 + 10.8 0.000 Intergenic Intergenic -63954 NM_207406 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr12-3603 chr12 54115348 54115558 + 10.8 0.000 intron (NR_026655, intron 1 of 1) LTR33|LTR|ERVL -10618 NR_026656 400043 Hs.19193 NR_026656 ENSG00000250742 LINC02381 - long intergenic non-protein coding RNA 2381 ncRNA chr8-1725 chr8 140623464 140623674 + 10.8 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 12064 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chrX-641 chrX 19370191 19370401 + 10.8 0.000 intron (NM_001001671, intron 24 of 28) intron (NM_001001671, intron 24 of 28) 26369 NM_000284 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr3-2824 chr3 14774025 14774235 + 10.8 0.000 Intergenic Intergenic 37284 NR_135245 152274 Hs.434128 NR_135245 ENSG00000260902 LINC02011 - long intergenic non-protein coding RNA 2011 ncRNA chr9-3276 chr9 34186388 34186598 + 10.8 0.000 intron (NM_001171201, intron 1 of 5) L1M5|LINE|L1 7450 NM_016525 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chrX-599 chrX 126164482 126164692 + 10.8 0.000 exon (NM_001013628, exon 1 of 1) exon (NM_001013628, exon 1 of 1) 1702 NM_001013628 340578 Hs.181867 NM_001013628 ENSG00000198354 DCAF12L2 WDR40C DDB1 and CUL4 associated factor 12 like 2 protein-coding chr14-1322 chr14 71142244 71142454 + 10.8 0.000 Intergenic Intergenic -178127 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr15-3391 chr15 88435154 88435364 + 10.8 0.000 Intergenic L1ME4b|LINE|L1 32129 NM_022163 26589 Hs.534261 NM_022163 ENSG00000259494 MRPL46 C15orf4|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding chr1-7209 chr1 218592628 218592838 + 10.8 0.000 intron (NR_031644, intron 3 of 6) intron (NR_031644, intron 3 of 6) 82638 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr13-1061 chr13 25941153 25941363 + 10.8 0.000 intron (NM_016529, intron 33 of 36) intron (NM_016529, intron 33 of 36) 109802 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr8-1935 chr8 42805241 42805451 + 10.8 0.000 Intergenic Intergenic -36560 NM_001199279 8973 Hs.103128 NM_004198 ENSG00000147434 CHRNA6 CHNRA6 cholinergic receptor nicotinic alpha 6 subunit protein-coding chr6-1393 chr6 111833284 111833494 + 10.8 0.000 intron (NM_153047, intron 2 of 13) intron (NM_153047, intron 2 of 13) 39682 NM_153047 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr8-4556 chr8 125683718 125683928 + 10.8 0.000 Intergenic L2c|LINE|L2 251614 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr17-4668 chr17 20116889 20117099 + 10.8 0.000 intron (NM_001033553, intron 3 of 14) intron (NM_001033553, intron 3 of 14) 29972 NM_152904 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr11-3340 chr11 118640839 118641049 + 10.8 0.000 intron (NM_001144759, intron 12 of 20) intron (NM_001144759, intron 12 of 20) -3056 NR_106773 102466719 NR_106773 ENSG00000284246 MIR6716 hsa-mir-6716 microRNA 6716 ncRNA chr16-3103 chr16 67992716 67992926 + 10.8 0.000 intron (NM_001369657, intron 1 of 9) intron (NM_001369657, intron 1 of 9) 573 NM_001369657 64174 Hs.372633 NM_022355 ENSG00000167261 DPEP2 MBD2 dipeptidase 2 protein-coding chr3-5516 chr3 196431216 196431426 + 10.8 0.000 promoter-TSS (NR_046745) promoter-TSS (NR_046745) -64 NR_046745 100874034 Hs.617990 NR_046745 UBXN7-AS1 - UBXN7 antisense RNA 1 ncRNA chr12-4683 chr12 48213556 48213766 + 10.8 0.000 Intergenic Intergenic -10369 NM_001004134 121275 Hs.446790 NM_001004134 ENSG00000172640 OR10AD1 OR10AD1P|OR12-1 olfactory receptor family 10 subfamily AD member 1 protein-coding chr7-6294 chr7 139351544 139351754 + 10.8 0.000 intron (NM_001244584, intron 2 of 10) L2b|LINE|L2 -8197 NM_001270643 51631 Hs.731488 NM_016019 ENSG00000146963 LUC7L2 CGI-59|CGI-74|LUC7B2 LUC7 like 2, pre-mRNA splicing factor protein-coding chr22-2958 chr22 49987317 49987527 + 10.8 0.000 Intergenic AluJr4|SINE|Alu 24556 NR_106879 102465493 NR_106879 ENSG00000276753 MIR6821 hsa-mir-6821 microRNA 6821 ncRNA chr11-3535 chr11 12818949 12819159 + 10.8 0.000 intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 144633 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr9-4534 chr9 75372757 75372967 + 10.8 0.000 Intergenic Intergenic 284348 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr5-3181 chr5 75263197 75263407 + 10.8 0.000 Intergenic AluJb|SINE|Alu -26424 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr3-7066 chr3 176690136 176690346 + 10.8 0.000 Intergenic Intergenic -54709 NR_109968 100505547 Hs.253350 NR_109968 LINC01208 - long intergenic non-protein coding RNA 1208 ncRNA chr1-10944 chr1 212106511 212106721 + 10.8 0.000 Intergenic Intergenic 29003 NR_036068 100422947 NR_036068 ENSG00000264358 MIR3122 mir-3122 microRNA 3122 ncRNA chr22-1261 chr22 25942588 25942798 + 10.8 0.000 intron (NM_001318245, intron 34 of 43) MIR|SINE|MIR 200505 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr2-7593 chr2 25597069 25597279 + 10.8 0.000 intron (NM_001351393, intron 4 of 17) AluJr|SINE|Alu 53048 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr16-1825 chr16 53745269 53745479 + 10.8 0.000 intron (NM_001363897, intron 1 of 7) intron (NM_001363897, intron 1 of 7) 41218 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr9-4976 chr9 18915276 18915486 + 10.8 0.000 Intergenic Intergenic 117828 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr4-2664 chr4 850252 850462 + 10.8 0.000 intron (NM_005255, intron 26 of 27) intron (NM_005255, intron 26 of 27) -24228 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr3-3167 chr3 177244431 177244641 + 10.8 0.000 Intergenic AluJb|SINE|Alu -47054 NM_024665 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr9-4295 chr9 120072002 120072212 + 10.8 0.000 Intergenic L2b|LINE|L2 137047 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr4-4712 chr4 88916298 88916508 + 10.7 0.000 intron (NM_014883, intron 5 of 23) intron (NM_014883, intron 5 of 23) -93042 NM_001265579 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr17-7014 chr17 54681018 54681228 + 10.7 0.000 Intergenic MER113B|DNA|hAT-Charlie -219568 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr11-2597 chr11 126990544 126990754 + 10.7 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -2107 NR_036126 100422918 NR_036126 ENSG00000266215 MIR3167 - microRNA 3167 ncRNA chr8-1251 chr8 131904116 131904326 + 10.7 0.000 non-coding (NR_136615, exon 1 of 24) non-coding (NR_136615, exon 1 of 24) 128 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr9-2775 chr9 110040907 110041117 + 10.7 0.000 intron (NM_147150, intron 7 of 9) intron (NM_147150, intron 7 of 9) -7586 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr4-2393 chr4 55255328 55255538 + 10.7 0.000 Intergenic Intergenic -90809 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding chr20-1276 chr20 46943297 46943507 + 10.7 0.000 intron (NM_172110, intron 1 of 13) MIRb|SINE|MIR 48559 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr16-3598 chr16 74605289 74605499 + 10.7 0.000 intron (NR_027264, intron 1 of 26) intron (NR_027264, intron 1 of 26) 1720 NM_012201 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr5-3100 chr5 43773669 43773879 + 10.7 0.000 Intergenic Intergenic -170544 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr13-702 chr13 41311988 41312198 + 10.7 0.000 promoter-TSS (NM_001354073) promoter-TSS (NM_001354073) -55 NM_001354076 9617 Hs.382176 NM_004294 ENSG00000120662 MTRF1 MRF1|MTTRF1|RF1 mitochondrial translation release factor 1 protein-coding chr5-2416 chr5 111968825 111969035 + 10.7 0.000 intron (NR_046678, intron 2 of 3) intron (NR_046678, intron 2 of 3) 8002 NM_001142474 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr4-5157 chr4 154972358 154972568 + 10.7 0.000 Intergenic LTR33|LTR|ERVL 190958 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr14-5451 chr14 105445933 105446143 + 10.7 0.000 intron (NM_001203258, intron 3 of 20) intron (NM_001203258, intron 3 of 20) 26211 NM_001203258 9112 Hs.525629 NM_004689 ENSG00000182979 MTA1 - metastasis associated 1 protein-coding chr17-6390 chr17 82090332 82090542 + 10.7 0.000 promoter-TSS (NR_132755) promoter-TSS (NR_132755) -297 NR_132755 106633803 NR_132755 SNORD134 ZL12 small nucleolar RNA, C/D box 134 snoRNA chr18-1371 chr18 36974705 36974915 + 10.7 0.000 intron (NR_136303, intron 6 of 13) intron (NR_136303, intron 6 of 13) -50996 NR_134585 105372069 Hs.666765 NR_134585 ENSG00000267039 LOC105372069 - uncharacterized LOC105372069 ncRNA chr2-1923 chr2 195656864 195657074 + 10.7 0.000 promoter-TSS (NM_001127257) promoter-TSS (NM_001127257) 11 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr4-3137 chr4 176238356 176238566 + 10.7 0.000 intron (NM_080874, intron 1 of 6) intron (NM_080874, intron 1 of 6) 30761 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chr3-7048 chr3 173553740 173553950 + 10.7 0.000 intron (NM_014932, intron 2 of 6) intron (NM_014932, intron 2 of 6) -30589 NM_001365928 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr14-1827 chr14 51547415 51547625 + 10.7 0.000 intron (NR_047477, intron 3 of 3) intron (NR_047477, intron 3 of 3) 52432 NR_047477 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr3-1626 chr3 54428152 54428362 + 10.7 0.000 intron (NM_018398, intron 4 of 37) intron (NM_018398, intron 4 of 37) 211600 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr21-1153 chr21 41385494 41385704 + 10.7 0.000 intron (NM_002463, intron 5 of 13) THE1B|LTR|ERVL-MaLR 23572 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding chr8-3012 chr8 120125131 120125341 + 10.7 0.000 5' UTR (NM_021110, exon 1 of 48) 5' UTR (NM_021110, exon 1 of 48) 134 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr1-11357 chr1 34978303 34978513 + 10.7 0.000 intron (NR_037869, intron 1 of 2) intron (NR_037869, intron 1 of 2) 298 NR_037869 653160 Hs.533986 NR_037869 ENSG00000241014 LOC653160 - uncharacterized LOC653160 ncRNA chr20-1102 chr20 64080310 64080520 + 10.7 0.000 promoter-TSS (NM_001039467) promoter-TSS (NM_001039467) 333 NM_000913 4987 Hs.2859 NM_000913 ENSG00000125510 OPRL1 KOR-3|NOCIR|NOP|NOPr|OOR|ORL1 opioid related nociceptin receptor 1 protein-coding chr6-3746 chr6 8453329 8453539 + 10.7 0.000 intron (NR_038980, intron 2 of 4) intron (NR_038980, intron 2 of 4) 17811 NR_038980 100506207 Hs.311049 NR_038979 ENSG00000285219 LOC100506207 - uncharacterized LOC100506207 ncRNA chr1-5777 chr1 158195821 158196031 + 10.7 0.000 Intergenic Intergenic 15979 NM_001766 912 Hs.1799 NM_001766 ENSG00000158473 CD1D CD1A|R3|R3G1 CD1d molecule protein-coding chr6-2089 chr6 151353243 151353453 + 10.7 0.000 exon (NM_005100, exon 4 of 5) exon (NM_005100, exon 4 of 5) 11642 NM_001370346 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr2-9031 chr2 198004243 198004453 + 10.7 0.000 intron (NM_006226, intron 1 of 5) intron (NM_006226, intron 1 of 5) 199755 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr17-4087 chr17 79912371 79912581 + 10.7 0.000 Intergenic Intergenic -6881 NR_110851 101928738 Hs.399280 NR_110851 ENSG00000262188 LINC01978 - long intergenic non-protein coding RNA 1978 ncRNA chr2-4511 chr2 26574218 26574428 + 10.7 0.000 intron (NM_001322426, intron 2 of 4) intron (NM_001322426, intron 2 of 4) 11736 NM_001322426 339778 Hs.407083 NM_001105519 ENSG00000173557 C2orf70 - chromosome 2 open reading frame 70 protein-coding chr1-4862 chr1 30727161 30727371 + 10.7 0.000 TTS (NR_034182) TTS (NR_034182) -3681 NM_002379 4146 Hs.150366 NM_002379 ENSG00000162510 MATN1 CMP|CRTM matrilin 1 protein-coding chr13-810 chr13 20553371 20553581 + 10.7 0.000 Intergenic Intergenic -13681 NR_148465 8100 Hs.187376 NM_006531 ENSG00000032742 IFT88 D13S1056E|DAF19|TG737|TTC10|hTg737 intraflagellar transport 88 protein-coding chr1-5471 chr1 95237348 95237558 + 10.7 0.000 intron (NM_001199682, intron 1 of 3) intron (NM_001199682, intron 1 of 3) 3243 NM_015485 25950 Hs.483512 NM_015485 ENSG00000122481 RWDD3 RSUME RWD domain containing 3 protein-coding chr16-2989 chr16 23406138 23406348 + 10.7 0.000 exon (NM_153603, exon 12 of 17) exon (NM_153603, exon 12 of 17) 46946 NM_153603 91949 Hs.185807 NM_153603 ENSG00000168434 COG7 CDG2E component of oligomeric golgi complex 7 protein-coding chr11-3283 chr11 82980611 82980821 + 10.7 0.000 3' UTR (NM_001286060, exon 5 of 5) 3' UTR (NM_001286060, exon 5 of 5) 53558 NM_001286059 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr12-4699 chr12 49267783 49267993 + 10.7 0.000 intron (NM_032704, intron 1 of 3) intron (NM_032704, intron 1 of 3) 2806 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr4-6307 chr4 85445320 85445530 + 10.7 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -29725 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr3-5916 chr3 42183984 42184194 + 10.7 0.000 intron (NM_001349247, intron 3 of 16) intron (NM_001349247, intron 3 of 16) 23896 NM_014965 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr2-6891 chr2 95031746 95031956 + 10.7 0.000 intron (NM_022440, intron 1 of 1) intron (NM_022440, intron 1 of 1) 6143 NM_002371 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr2-2083 chr2 219514781 219514991 + 10.7 0.000 exon (NM_182847, exon 1 of 9) exon (NM_182847, exon 1 of 9) 716 NM_182847 55515 Hs.87469 NM_018674 ENSG00000072182 ASIC4 ACCN4|BNAC4 acid sensing ion channel subunit family member 4 protein-coding chr6-1670 chr6 3741362 3741572 + 10.7 0.000 intron (NM_183373, intron 1 of 4) intron (NM_183373, intron 1 of 4) 10545 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr5-3670 chr5 164208977 164209187 + 10.7 0.000 Intergenic Intergenic 258320 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr9-3812 chr9 128732304 128732514 + 10.7 0.000 intron (NM_006336, intron 15 of 15) AluSz|SINE|Alu 7947 NR_046240 100506100 Hs.62946 NR_046240 ENSG00000223478 LOC100506100 - uncharacterized LOC100506100 ncRNA chr9-2427 chr9 136509258 136509468 + 10.7 0.000 intron (NM_017617, intron 18 of 33) intron (NM_017617, intron 18 of 33) 10263 NR_039820 100616242 NR_039820 ENSG00000263403 MIR4673 - microRNA 4673 ncRNA chr17-3915 chr17 56867970 56868180 + 10.7 0.000 3' UTR (NM_003647, exon 12 of 12) 3' UTR (NM_003647, exon 12 of 12) 16838 NR_027025 246754 Hs.720736 NR_027025 MTVR2 - mouse mammary tumor virus receptor homolog 2 pseudo chr1-4491 chr1 20618637 20618847 + 10.7 0.000 3' UTR (NM_001785, exon 4 of 4) 3' UTR (NM_001785, exon 4 of 4) -14716 NM_032409 65018 Hs.389171 NM_032409 ENSG00000158828 PINK1 BRPK|PARK6 PTEN induced kinase 1 protein-coding chr11-3245 chr11 72824045 72824255 + 10.7 0.000 intron (NM_001318766, intron 8 of 17) intron (NM_001318766, intron 8 of 17) 9739 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr2-3600 chr2 78983076 78983286 + 10.7 0.000 Intergenic Intergenic -42521 NM_198448 130120 Hs.447084 NM_198448 ENSG00000143954 REG3G LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429 regenerating family member 3 gamma protein-coding chr9-2240 chr9 32672533 32672743 + 10.7 0.000 Intergenic MIR3|SINE|MIR -36969 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr6-6855 chr6 8935387 8935597 + 10.7 0.000 Intergenic AluSz|SINE|Alu 283283 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr2-6338 chr2 80026462 80026672 + 10.7 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -159984 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr19-3493 chr19 39033303 39033513 + 10.7 0.000 promoter-TSS (NM_178820) promoter-TSS (NM_178820) -859 NM_178820 126433 Hs.187461 NM_178820 ENSG00000161243 FBXO27 FBG5|Fbx27 F-box protein 27 protein-coding chr8-1970 chr8 69584119 69584329 + 10.7 0.000 intron (NR_156414, intron 5 of 20) intron (NR_156414, intron 5 of 20) -8676 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr7-5545 chr7 45623172 45623382 + 10.7 0.000 intron (NM_001281768, intron 5 of 9) intron (NM_001281768, intron 5 of 9) 48909 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr1-7133 chr1 204013238 204013448 + 10.7 0.000 Intergenic L2a|LINE|L2 27921 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr2-6988 chr2 135745584 135745794 + 10.7 0.000 intron (NM_014607, intron 1 of 12) intron (NM_014607, intron 1 of 12) -3045 NR_163478 107985946 Hs.591242 NM_001365239 LOC107985946 - uncharacterized LOC107985946 ncRNA chr22-1372 chr22 31179509 31179719 + 10.7 0.000 intron (NR_024212, intron 1 of 5) intron (NR_024212, intron 1 of 5) 19432 NR_024212 91445 Hs.517553 NM_152267 ENSG00000138942 RNF185 - ring finger protein 185 protein-coding chr13-1536 chr13 27201711 27201921 + 10.7 0.000 Intergenic ERVL-E-int|LTR|ERVL 29557 NR_046548 100874071 Hs.735400 NR_046548 USP12-AS2 - USP12 antisense RNA 2 (head to head) ncRNA chr7-3217 chr7 140285417 140285627 + 10.7 0.000 Intergenic L2a|LINE|L2 108261 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr2-4691 chr2 219252001 219252211 + 10.7 0.000 exon (NM_001278552, exon 2 of 4) exon (NM_001278552, exon 2 of 4) -1137 NM_001355221 80086 Hs.664469 NM_001355221 ENSG00000243910 TUBA4B TUBA4 tubulin alpha 4b protein-coding chr1-3333 chr1 26363802 26364012 + 10.7 0.000 intron (NM_001114759, intron 4 of 5) intron (NM_001114759, intron 4 of 5) 8887 NM_001114759 257101 Hs.353208 NM_173574 ENSG00000176083 ZNF683 Hobit zinc finger protein 683 protein-coding chr19-1476 chr19 5673452 5673662 + 10.7 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat 6681 NM_001365761 125988 Hs.356626 NM_205767 ENSG00000174917 MICOS13 C19orf70|MIC13|P117|QIL1 mitochondrial contact site and cristae organizing system subunit 13 protein-coding chr6-2176 chr6 33559883 33560093 + 10.7 0.000 Intergenic MLT1H-int|LTR|ERVL-MaLR 20288 NM_001188 578 Hs.485139 NM_001188 ENSG00000030110 BAK1 BAK|BAK-LIKE|BCL2L7|CDN1 BCL2 antagonist/killer 1 protein-coding chr14-3900 chr14 98571473 98571683 + 10.7 0.000 Intergenic Intergenic -140035 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr14-1575 chr14 75310800 75311010 + 10.7 0.000 Intergenic Intergenic 16501 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr12-1420 chr12 50876354 50876564 + 10.7 0.000 intron (NM_182559, intron 3 of 4) L1PA16|LINE|L1 33533 NM_182559 283471 Hs.125571 NM_182559 ENSG00000186452 TMPRSS12 CT151 transmembrane serine protease 12 protein-coding chr3-1456 chr3 49207181 49207391 + 10.7 0.000 intron (NM_001135197, intron 1 of 7) AluSc|SINE|Alu 7788 NM_001135197 339834 Hs.631931 NM_178173 ENSG00000173421 CCDC36 CT74 coiled-coil domain containing 36 protein-coding chr1-6692 chr1 53637602 53637812 + 10.7 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 96497 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr2-6428 chr2 149055675 149055885 + 10.7 0.000 intron (NM_001317006, intron 1 of 4) L1MB7|LINE|L1 17081 NM_177964 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr15-2318 chr15 78540000 78540210 + 10.7 0.000 promoter-TSS (NM_001102668) promoter-TSS (NM_001102668) -300 NM_001102668 5685 Hs.251531 NM_002789 ENSG00000041357 PSMA4 HC9|HsT17706|PSC9 proteasome subunit alpha 4 protein-coding chr1-9442 chr1 34410063 34410273 + 10.7 0.000 Intergenic Intergenic 233261 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr10-2999 chr10 96409780 96409990 + 10.7 0.000 intron (NM_012465, intron 9 of 20) MER115|DNA|hAT-Tip100 -50520 NM_001284322 93377 Hs.12449 NM_033207 ENSG00000197430 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding chr1-2635 chr1 148351756 148351966 + 10.7 0.000 Intergenic Intergenic 10672 NR_104082 101954273 NR_104082 ENSG00000207340 RNVU1-1 RNU1-10P|RNU1-53|RNU1P10|RNVU1-10|U1.4|U1P14|vU1.1|vU1.10 RNA, variant U1 small nuclear 1 snRNA chr20-1404 chr20 24804364 24804574 + 10.7 0.000 Intergenic Intergenic -144800 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr11-2394 chr11 2669017 2669227 + 10.7 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 30876 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr6-2585 chr6 75023726 75023936 + 10.7 0.000 Intergenic Intergenic 104951 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr7-3142 chr7 66208008 66208218 + 10.7 0.000 intron (NM_003596, intron 1 of 5) intron (NM_003596, intron 1 of 5) 2779 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr15-2031 chr15 51204030 51204240 + 10.7 0.000 intron (NR_146310, intron 1 of 2) intron (NR_146310, intron 1 of 2) -38055 NR_039863 100616369 NR_039863 ENSG00000266593 MIR4713 - microRNA 4713 ncRNA chr1-8337 chr1 53940371 53940581 + 10.7 0.000 intron (NM_001316935, intron 1 of 5) L1MEc|LINE|L1 5347 NM_016126 51668 Hs.525462 NM_016126 ENSG00000081870 HSPB11 C1orf41|HSPCO34|IFT25|PP25 heat shock protein family B (small) member 11 protein-coding chr14-2022 chr14 59597657 59597867 + 10.7 0.000 intron (NM_021136, intron 8 of 8) L2a|LINE|L2 12377 NM_001363702 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr11-2645 chr11 47254446 47254656 + 10.7 0.000 intron (NM_001130102, intron 1 of 8) intron (NM_001130102, intron 1 of 8) -3156 NM_001363595 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr3-2973 chr3 76437051 76437261 + 10.7 0.000 Intergenic Intergenic -602943 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr22-2180 chr22 45234042 45234252 + 10.7 0.000 intron (NM_001009880, intron 1 of 9) intron (NM_001009880, intron 1 of 9) 6622 NM_001009880 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr22-2700 chr22 37596743 37596953 + 10.7 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -11626 NM_001363771 26088 Hs.499158 NM_013365 ENSG00000100083 GGA1 - golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding chr3-10579 chr3 142087801 142088011 + 10.7 0.000 intron (NM_001178138, intron 3 of 13) L2a|LINE|L2 -59280 NM_006286 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr2-8804 chr2 168375396 168375606 + 10.7 0.000 Intergenic L1MA3|LINE|L1 -80771 NM_203463 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chrX-566 chrX 45806803 45807013 + 10.7 0.000 Intergenic Intergenic 44582 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr21-692 chr21 26524386 26524596 + 10.7 0.000 intron (NR_135515, intron 2 of 3) intron (NR_135515, intron 2 of 3) 48795 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr15-1817 chr15 35541018 35541228 + 10.7 0.000 intron (NM_001141972, intron 2 of 3) intron (NM_001141972, intron 2 of 3) 5042 NM_080650 89978 Hs.107196 NM_080650 ENSG00000134146 DPH6 ATPBD4 diphthamine biosynthesis 6 protein-coding chr9-7658 chr9 68904083 68904293 + 10.7 0.000 intron (NM_003558, intron 8 of 15) MIRb|SINE|MIR 71653 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chr7-1807 chr7 100675660 100675870 + 10.7 0.000 intron (NM_005273, intron 1 of 9) CpG 2025 NM_005273 2783 Hs.185172 NM_005273 ENSG00000172354 GNB2 - G protein subunit beta 2 protein-coding chr2-1561 chr2 9288365 9288575 + 10.7 0.000 intron (NM_003887, intron 2 of 27) intron (NM_003887, intron 2 of 27) 81658 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr20-1038 chr20 51695754 51695964 + 10.7 0.000 intron (NM_006045, intron 6 of 27) intron (NM_006045, intron 6 of 27) 72531 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr21-925 chr21 36004399 36004609 + 10.7 0.000 promoter-TSS (NR_110419) promoter-TSS (NR_110419) 163 NR_110418 101928269 Hs.589909 NR_110418 LOC101928269 - uncharacterized LOC101928269 ncRNA chr19-2460 chr19 1423422 1423632 + 10.7 0.000 intron (NM_001352035, intron 6 of 10) intron (NM_001352035, intron 6 of 10) -14837 NM_001018 6209 Hs.406683 NM_001018 ENSG00000115268 RPS15 RIG|S15 ribosomal protein S15 protein-coding chr10-7779 chr10 35328456 35328666 + 10.7 0.000 intron (NM_181698, intron 3 of 11) intron (NM_181698, intron 3 of 11) -7948 NM_145012 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr3-3796 chr3 14586465 14586675 + 10.7 0.000 Intergenic Intergenic -46228 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chr9-1471 chr9 98057755 98057965 + 10.7 0.000 intron (NM_018946, intron 1 of 5) AluJo|SINE|Alu 1128 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr1-3941 chr1 99599608 99599818 + 10.7 0.000 intron (NR_031666, intron 1 of 4) intron (NR_031666, intron 1 of 4) -46400 NM_017734 54873 Hs.483993 NM_017734 ENSG00000099260 PALMD C1orf11|PALML palmdelphin protein-coding chr21-915 chr21 29148443 29148653 + 10.7 0.000 intron (NM_001286624, intron 1 of 3) intron (NM_001286624, intron 1 of 3) 2971 NM_001286624 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr9-2612 chr9 13939112 13939322 + 10.7 0.000 intron (NR_038194, intron 1 of 2) intron (NR_038194, intron 1 of 2) 11246 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr17-2807 chr17 8888213 8888423 + 10.7 0.000 exon (NM_001251852, exon 9 of 18) exon (NM_001251852, exon 9 of 18) -20641 NM_001290211 146850 Hs.255809 NM_001010855 ENSG00000276231 PIK3R6 C17orf38|HsT41028|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase regulatory subunit 6 protein-coding chr5-3067 chr5 34332285 34332495 + 10.7 0.000 Intergenic L1PA15|LINE|L1 -87666 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr17-3891 chr17 50363906 50364116 + 10.7 0.000 Intergenic Intergenic 9173 NM_016504 51264 Hs.7736 NM_016504 ENSG00000108826 MRPL27 L27mt mitochondrial ribosomal protein L27 protein-coding chr2-1459 chr2 27429130 27429340 + 10.7 0.000 intron (NM_001321359, intron 1 of 18) CpG 604 NM_001321358 29959 Hs.515876 NM_013392 ENSG00000115216 NRBP1 BCON3|MADM|MUDPNP|NRBP nuclear receptor binding protein 1 protein-coding chr13-1283 chr13 23384163 23384373 + 10.7 0.000 intron (NM_014363, intron 2 of 9) intron (NM_014363, intron 2 of 9) -8760 NM_001278055 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr6-1105 chr6 107820398 107820608 + 10.7 0.000 intron (NM_198081, intron 1 of 7) intron (NM_198081, intron 1 of 7) 3810 NM_001286408 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr19-4935 chr19 44262640 44262850 + 10.7 0.000 intron (NM_181756, intron 1 of 4) MIR|SINE|MIR 2831 NM_181756 353355 Hs.466891 NM_181756 ENSG00000159915 ZNF233 - zinc finger protein 233 protein-coding chr7-1957 chr7 100574883 100575093 + 10.7 0.000 5' UTR (NM_001289933, exon 1 of 1) 5' UTR (NM_001289933, exon 1 of 1) 231 NM_001289933 101927655 Hs.125742 NM_001289933 ZASP - ZO-2 associated speckle protein protein-coding chr8-2862 chr8 135496642 135496852 + 10.7 0.000 intron (NM_006558, intron 1 of 8) intron (NM_006558, intron 1 of 8) 39291 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr21-470 chr21 43904543 43904753 + 10.7 0.000 intron (NM_001369881, intron 2 of 9) intron (NM_001369881, intron 2 of 9) -12140 NM_001369880 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr11-2303 chr11 62672356 62672566 + 10.7 0.000 promoter-TSS (NM_024099) promoter-TSS (NM_024099) -678 NR_160410 79081 Hs.9061 NM_024099 ENSG00000162194 LBHD1 C11orf48 LBH domain containing 1 protein-coding chr4-3755 chr4 84632170 84632380 + 10.7 0.000 intron (NM_001263, intron 6 of 12) intron (NM_001263, intron 6 of 12) 49148 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr17-5754 chr17 59857342 59857552 + 10.7 0.000 Intergenic Intergenic 16181 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr13-3111 chr13 62060434 62060644 + 10.7 0.000 Intergenic MLT1J2-int|LTR|ERVL-MaLR -30991 NR_046995 100874143 Hs.552684 NR_046995 ENSG00000229578 LINC00358 - long intergenic non-protein coding RNA 358 ncRNA chr8-1552 chr8 117881417 117881627 + 10.7 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 39391 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr19-1133 chr19 6092521 6092731 + 10.7 0.000 intron (NM_000635, intron 1 of 17) intron (NM_000635, intron 1 of 17) 17874 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr7-4793 chr7 85413655 85413865 + 10.7 0.000 Intergenic MER68B|LTR|ERVL -7362 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr8-2195 chr8 139709135 139709345 + 10.7 0.000 Intergenic Intergenic -6117 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr12-3103 chr12 23662226 23662436 + 10.7 0.000 intron (NM_152989, intron 10 of 17) intron (NM_152989, intron 10 of 17) -77745 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr4-976 chr4 76957313 76957523 + 10.7 0.000 intron (NM_018243, intron 1 of 9) MIR|SINE|MIR 7666 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr12-2663 chr12 32744567 32744777 + 10.7 0.000 3' UTR (NM_012062, exon 20 of 20) 3' UTR (NM_012062, exon 20 of 20) 11225 NM_001040436 51067 Hs.505231 NM_015936 ENSG00000139131 YARS2 CGI-04|MLASA2|MT-TYRRS|TYRRS tyrosyl-tRNA synthetase 2 protein-coding chrX-499 chrX 54492470 54492680 + 10.7 0.000 intron (NM_004463, intron 1 of 17) intron (NM_004463, intron 1 of 17) 3659 NM_004463 2245 Hs.709201 NM_004463 ENSG00000102302 FGD1 AAS|FGDY|MRXS16|ZFYVE3 FYVE, RhoGEF and PH domain containing 1 protein-coding chr14-1780 chr14 102209245 102209455 + 10.7 0.000 non-coding (NR_038354, exon 4 of 4) non-coding (NR_038354, exon 4 of 4) 26076 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr19-3601 chr19 50479076 50479286 + 10.7 0.000 intron (NM_206538, intron 3 of 6) intron (NM_206538, intron 3 of 6) -2333 NM_138411 112703 Hs.448941 NM_138411 ENSG00000142530 FAM71E1 - family with sequence similarity 71 member E1 protein-coding chr14-1183 chr14 61527279 61527489 + 10.7 0.000 intron (NM_006255, intron 10 of 13) intron (NM_006255, intron 10 of 13) 42810 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr5-1600 chr5 34512023 34512233 + 10.7 0.000 Intergenic LTR33|LTR|ERVL -144200 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr10-5834 chr10 112446120 112446330 + 10.7 0.000 promoter-TSS (NR_134521) promoter-TSS (NR_134521) 689 NM_022494 64429 Hs.196990 NM_022494 ENSG00000023041 ZDHHC6 DHHC-6|ZNF376 zinc finger DHHC-type containing 6 protein-coding chr18-1061 chr18 23718100 23718310 + 10.7 0.000 intron (NM_001127717, intron 2 of 73) intron (NM_001127717, intron 2 of 73) 28752 NM_001127717 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr1-3293 chr1 245154790 245155000 + 10.7 0.000 promoter-TSS (NM_018012).2 promoter-TSS (NM_018012).2 -90 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr1-6118 chr1 156389797 156390007 + 10.7 0.000 Intergenic Intergenic 20691 NR_146763 57127 Hs.131835 NM_020407 ENSG00000132677 RHBG SLC42A2 Rh family B glycoprotein (gene/pseudogene) protein-coding chr1-6520 chr1 26196680 26196890 + 10.7 0.000 intron (NM_198137, intron 3 of 9) L1MC5a|LINE|L1 6157 NM_198137 378807 Hs.123532 NM_198137 ENSG00000188782 CATSPER4 - cation channel sperm associated 4 protein-coding chr4-3889 chr4 143921293 143921503 + 10.7 0.000 intron (NR_125886, intron 2 of 6) intron (NR_125886, intron 2 of 6) 9067 NR_125886 101927636 Hs.658686 NR_125886 ENSG00000251600 LOC101927636 - uncharacterized LOC101927636 ncRNA chr12-1424 chr12 54378996 54379206 + 10.7 0.000 intron (NM_015481, intron 1 of 6) CpG 5632 NM_001290001 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr4-5032 chr4 140727533 140727743 + 10.7 0.000 intron (NM_015130, intron 1 of 20) intron (NM_015130, intron 1 of 20) 28747 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chrX-1041 chrX 103776835 103777045 + 10.7 0.000 promoter-TSS (NM_001305004) promoter-TSS (NM_001305004) 87 NM_001305004 5354 Hs.1787 NM_000533 ENSG00000123560 PLP1 GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2 proteolipid protein 1 protein-coding chr5-2912 chr5 132240088 132240298 + 10.7 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -12340 NM_001365677 8974 Hs.519568 NM_004199 ENSG00000072682 P4HA2 MYP25 prolyl 4-hydroxylase subunit alpha 2 protein-coding chr4-2549 chr4 77001878 77002088 + 10.7 0.000 intron (NM_001306147, intron 4 of 11) FLAM_C|SINE|Alu 52231 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr22-1770 chr22 28694247 28694457 + 10.7 0.000 intron (NM_001257387, intron 13 of 15) intron (NM_001257387, intron 13 of 15) -14487 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding chr2-6890 chr2 91766716 91766926 + 10.7 0.000 Intergenic Intergenic -8521 NR_003503 645367 Hs.650223 NR_003503 GGT8P GGT1P1 gamma-glutamyltransferase 8 pseudogene pseudo chr20-3885 chr20 31245681 31245891 + 10.7 0.000 Intergenic Intergenic -11878 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr18-2185 chr18 60188684 60188894 + 10.7 0.000 Intergenic Intergenic 183986 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr3-2816 chr3 12871029 12871239 + 10.7 0.000 Intergenic Intergenic 14077 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr4-1932 chr4 87498442 87498652 + 10.7 0.000 intron (NM_001291976, intron 2 of 11) intron (NM_001291976, intron 2 of 11) 30956 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr2-3724 chr2 232871582 232871792 + 10.7 0.000 intron (NM_001346122, intron 2 of 3) intron (NM_001346122, intron 2 of 3) 1601 NM_206895 389084 Hs.657509 NM_206895 ENSG00000182600 SNORC ASCL830|C2orf82|UNQ830 secondary ossification center associated regulator of chondrocyte maturation protein-coding chr4-1691 chr4 155722868 155723078 + 10.7 0.000 TTS (NM_001130687) TTS (NM_001130687) -36048 NM_000857 2983 Hs.77890 NM_000857 ENSG00000061918 GUCY1B1 GC-S-beta-1|GC-SB3|GUC1B3|GUCB3|GUCSB3|GUCY1B3 guanylate cyclase 1 soluble subunit beta 1 protein-coding chr2-1514 chr2 43041866 43042076 + 10.7 0.000 Intergenic Intergenic -2428 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr4-779 chr4 139919573 139919783 + 10.7 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -208337 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr8-4153 chr8 76653335 76653545 + 10.7 0.000 intron (NR_024360, intron 2 of 3) intron (NR_024360, intron 2 of 3) -27807 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr1-12549 chr1 28032301 28032511 + 10.7 0.000 intron (NM_001282562, intron 5 of 16) L1ME4a|LINE|L1 56204 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr4-1413 chr4 6935820 6936030 + 10.7 0.000 intron (NM_020773, intron 2 of 13) AluSz|SINE|Alu -18241 NM_001330638 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr10-4057 chr10 32326886 32327096 + 10.7 0.000 intron (NM_001282391, intron 1 of 13) L1M1|LINE|L1 20167 NM_001272004 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr6-2788 chr6 143410837 143411047 + 10.7 0.000 Intergenic Intergenic 31735 NM_001286259 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase tRNA specific 2 protein-coding chr19-4272 chr19 445052 445262 + 10.7 0.000 intron (NM_012435, intron 1 of 12) MER102a|DNA|hAT-Charlie 15839 NM_012435 25759 Hs.30965 NM_012435 ENSG00000129946 SHC2 SCK|SHCB|SLI SHC adaptor protein 2 protein-coding chr10-5257 chr10 67764136 67764346 + 10.7 0.000 Intergenic CpG -68046 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chrX-3915 chrX 9362336 9362546 + 10.7 0.000 Intergenic Intergenic -100854 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr1-8251 chr1 32480035 32480245 + 10.7 0.000 intron (NM_001145720, intron 2 of 3) MLT1B|LTR|ERVL-MaLR 15068 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr2-9239 chr2 218917958 218918168 + 10.7 0.000 intron (NR_110238, intron 3 of 4) L1MEc|LINE|L1 12574 NR_110238 101928537 Hs.611129 NR_110238 ENSG00000228135 LINC01494 - long intergenic non-protein coding RNA 1494 ncRNA chr10-5512 chr10 83275317 83275527 + 10.7 0.000 Intergenic Intergenic 401667 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr21-607 chr21 26115955 26116165 + 10.7 0.000 intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) 24330 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr11-5172 chr11 5304132 5304342 + 10.7 0.000 Intergenic Intergenic -2291 NM_033179 79339 Hs.679499 NM_033179 ENSG00000183251 OR51B4 HOR5'Beta1 olfactory receptor family 51 subfamily B member 4 protein-coding chr10-1996 chr10 49690691 49690901 + 10.7 0.000 intron (NM_182554, intron 1 of 2) intron (NM_182554, intron 1 of 2) 11145 NM_001042427 282966 Hs.131287 NM_182554 ENSG00000178645 C10orf53 - chromosome 10 open reading frame 53 protein-coding chr2-3684 chr2 200985590 200985800 + 10.7 0.000 intron (NM_001321619, intron 11 of 11) intron (NM_001321619, intron 11 of 11) -22035 NR_033915 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr12-4123 chr12 66234628 66234838 + 10.7 0.000 intron (NM_007199, intron 8 of 11) intron (NM_007199, intron 8 of 11) -16349 NR_106757 102465249 NR_106757 ENSG00000284011 MIR6502 hsa-mir-6502 microRNA 6502 ncRNA chr14-1220 chr14 90642508 90642718 + 10.7 0.000 promoter-TSS (NR_110134) promoter-TSS (NR_110134) -16 NR_110134 101928909 Hs.662545 NR_110134 ENSG00000259163 LOC101928909 - uncharacterized LOC101928909 ncRNA chr9-3495 chr9 16664253 16664463 + 10.7 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -62456 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr10-4920 chr10 22899519 22899729 + 10.7 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -28400 NM_001282747 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding chr13-2366 chr13 39127113 39127323 + 10.7 0.000 Intergenic Intergenic 88762 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr19-1642 chr19 6516862 6517072 + 10.7 0.000 Intergenic CpG -14059 NM_003811 8744 Hs.1524 NM_003811 ENSG00000125657 TNFSF9 4-1BB-L|CD137L|TNLG5A TNF superfamily member 9 protein-coding chrX-2431 chrX 78322921 78323131 + 10.7 0.000 intron (NM_001282188, intron 1 of 3) intron (NM_001282188, intron 1 of 3) 4585 NM_001282187 10800 Hs.733809 NM_006639 ENSG00000173198 CYSLTR1 CYSLT1|CYSLT1R|CYSLTR|HMTMF81 cysteinyl leukotriene receptor 1 protein-coding chr16-3174 chr16 81997818 81998028 + 10.7 0.000 3' UTR (NM_145168, exon 3 of 3) 3' UTR (NM_145168, exon 3 of 3) 13547 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr17-3268 chr17 39063383 39063593 + 10.7 0.000 non-coding (NR_036551, exon 2 of 5) non-coding (NR_036551, exon 2 of 5) 6469 NR_036551 100131347 Hs.676510 NR_036551 ENSG00000263818 RDM1P5 - RDM1 pseudogene 5 pseudo chr17-6593 chr17 50466611 50466821 + 10.7 0.000 intron (NM_001267, intron 1 of 3) intron (NM_001267, intron 1 of 3) -1613 NR_110232 80221 Hs.288959 NM_025149 ENSG00000167107 ACSF2 ACSMW|AVYV493 acyl-CoA synthetase family member 2 protein-coding chr2-6141 chr2 230983483 230983693 + 10.7 0.000 TTS (NR_033879) TTS (NR_033879) 12444 NR_033879 348761 Hs.404807 NR_033879 ENSG00000238062 SPATA3-AS1 - SPATA3 antisense RNA 1 (head to head) ncRNA chr7-2072 chr7 151632311 151632521 + 10.7 0.000 promoter-TSS (NM_024429) promoter-TSS (NM_024429) -158 NM_024429 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr6-1622 chr6 83920297 83920507 + 10.7 0.000 intron (NM_016230, intron 7 of 15) intron (NM_016230, intron 7 of 15) 60713 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding chr10-2457 chr10 17661225 17661435 + 10.7 0.000 intron (NM_001324287, intron 2 of 11) intron (NM_001324287, intron 2 of 11) 17179 NM_001324282 8027 Hs.335391 NM_003473 ENSG00000136738 STAM STAM-1|STAM1 signal transducing adaptor molecule protein-coding chr12-8284 chr12 125772414 125772624 + 10.7 0.000 Intergenic Intergenic 150067 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr18-1499 chr18 79408644 79408854 + 10.7 0.000 intron (NM_001278673, intron 1 of 8) (CATC)n|Simple_repeat|Simple_repeat 8450 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr3-3120 chr3 149454885 149455095 + 10.7 0.000 Intergenic Intergenic -19707 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr7-5391 chr7 32921950 32922160 + 10.7 0.000 intron (NR_003500, intron 3 of 5) intron (NR_003500, intron 3 of 5) 21115 NR_003500 441212 Hs.648086 NM_001039754 ENSG00000205763 RP9P - RP9 pseudogene pseudo chr17-8034 chr17 50352626 50352836 + 10.7 0.000 intron (NR_110010, intron 1 of 9) ERV3-16A3_LTR|LTR|ERVL 6605 NR_110010 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr14-2413 chr14 61569763 61569973 + 10.7 0.000 promoter-TSS (NR_039985) promoter-TSS (NR_039985) 326 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr4-4532 chr4 67994665 67994875 + 10.7 0.000 intron (NR_033737, intron 1 of 3) intron (NR_033737, intron 1 of 3) 2669 NR_033737 644759 Hs.646883 NR_033737 ENSG00000229009 TMPRSS11GP - transmembrane serine protease 11G, pseudogene pseudo chr10-2230 chr10 77243352 77243562 + 10.7 0.000 intron (NM_001322838, intron 3 of 29) intron (NM_001322838, intron 3 of 29) 102626 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr11-6023 chr11 25692680 25692890 + 10.7 0.000 Intergenic L1PB1|LINE|L1 -496338 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr1-6825 chr1 97099546 97099756 + 10.7 0.000 intron (NM_000110, intron 20 of 22) intron (NM_000110, intron 20 of 22) 3728 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr10-2264 chr10 124518211 124518421 + 10.7 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) 56493 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr7-5423 chr7 35754318 35754528 + 10.7 0.000 TTS (NR_120512) TTS (NR_120512) 37986 NR_108082 100506725 Hs.304253 NR_108082 ENSG00000227544 LOC100506725 - uncharacterized LOC100506725 ncRNA chr3-3473 chr3 183148192 183148402 + 10.7 0.000 intron (NM_014398, intron 3 of 5) L1MA3|LINE|L1 14437 NM_014398 27074 Hs.518448 NM_014398 ENSG00000078081 LAMP3 CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403 lysosomal associated membrane protein 3 protein-coding chr17-8643 chr17 81690755 81690965 + 10.7 0.000 intron (NM_004712, intron 7 of 21) intron (NM_004712, intron 7 of 21) -2897 NR_106844 102465471 NR_106844 ENSG00000277784 MIR6786 hsa-mir-6786 microRNA 6786 ncRNA chr16-2733 chr16 90003060 90003270 + 10.7 0.000 Intergenic Intergenic 6956 NM_024043 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr19-2229 chr19 44808719 44808929 + 10.7 0.000 promoter-TSS (NM_005581) promoter-TSS (NM_005581) -235 NM_005581 4059 Hs.625725 NM_005581 ENSG00000187244 BCAM AU|CD239|LU|MSK19 basal cell adhesion molecule (Lutheran blood group) protein-coding chr11-2922 chr11 66717178 66717388 + 10.7 0.000 intron (NM_006946, intron 2 of 36) intron (NM_006946, intron 2 of 36) 4116 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr1-3108 chr1 39691270 39691480 + 10.7 0.000 promoter-TSS (NM_016257) promoter-TSS (NM_016257) 58 NM_016257 51440 Hs.743975 NM_016257 ENSG00000116983 HPCAL4 HLP4 hippocalcin like 4 protein-coding chr2-4426 chr2 138610402 138610612 + 10.7 0.000 Intergenic MER21A|LTR|ERVL 108737 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr17-7402 chr17 8752387 8752597 + 10.7 0.000 intron (NM_001128076, intron 6 of 6) intron (NM_001128076, intron 6 of 6) 6054 NM_001128076 388333 Hs.230205 NM_001128076 ENSG00000183318 SPDYE4 - speedy/RINGO cell cycle regulator family member E4 protein-coding chr11-3291 chr11 86163218 86163428 + 10.7 0.000 Intergenic L2c|LINE|L2 -81061 NM_001308007 8726 Hs.503510 NM_003797 ENSG00000074266 EED COGIS|HEED|WAIT1 embryonic ectoderm development protein-coding chr22-1102 chr22 36912375 36912585 + 10.7 0.000 Intergenic Intergenic -1148 NM_000395 1439 Hs.592192 NM_000395 ENSG00000100368 CSF2RB CD131|CDw131|IL3RB|IL5RB|SMDP5|betaGMR colony stimulating factor 2 receptor beta common subunit protein-coding chr9-4511 chr9 63821037 63821247 + 10.7 0.000 Intergenic AluSg4|SINE|Alu -1488 NR_039688 100616184 NR_039688 ENSG00000276029 MIR4477A - microRNA 4477a ncRNA chr2-10936 chr2 77406175 77406385 + 10.7 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) 116096 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr4-3210 chr4 36088851 36089061 + 10.7 0.000 intron (NR_146894, intron 28 of 32) intron (NR_146894, intron 28 of 32) 154983 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr5-4649 chr5 35899223 35899433 + 10.7 0.000 Intergenic Intergenic 39294 NM_001042625 133690 Hs.55150 NM_144647 ENSG00000152611 CAPSL - calcyphosine like protein-coding chr7-3969 chr7 134606455 134606665 + 10.7 0.000 Intergenic Intergenic -40219 NM_199186 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr5-4997 chr5 81418617 81418827 + 10.7 0.000 3' UTR (NM_001256732, exon 17 of 17) 3' UTR (NM_001256732, exon 17 of 17) -24588 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr19-2687 chr19 16548313 16548523 + 10.7 0.000 Intergenic AluSx|SINE|Alu -5981 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr14-2705 chr14 87256157 87256367 + 10.7 0.000 Intergenic Intergenic 350484 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chrX-278 chrX 53193592 53193802 + 10.7 0.000 intron (NR_148673, intron 24 of 26) intron (NR_148673, intron 24 of 26) 1791 NR_106955 102465539 NR_106955 ENSG00000276575 MIR6895 hsa-mir-6895 microRNA 6895 ncRNA chr3-4105 chr3 108840679 108840889 + 10.7 0.000 intron (NM_001317747, intron 2 of 4) MER70B|LTR|ERVL 17998 NM_001317747 50852 Hs.138701 NM_016388 ENSG00000163519 TRAT1 HSPC062|TCRIM|TRIM|pp29/30 T cell receptor associated transmembrane adaptor 1 protein-coding chr14-4229 chr14 99446007 99446217 + 10.7 0.000 intron (NM_199123, intron 6 of 8) intron (NM_199123, intron 6 of 8) 34747 NM_032233 84193 Hs.510407 NM_032233 ENSG00000183576 SETD3 C14orf154|hSETD3 SET domain containing 3, actin histidine methyltransferase protein-coding chr7-2927 chr7 135144243 135144453 + 10.7 0.000 intron (NM_001305630, intron 2 of 2) L1M4b|LINE|L1 -3724 NM_018295 55281 Hs.521213 NM_018295 ENSG00000146859 TMEM140 - transmembrane protein 140 protein-coding chr10-2597 chr10 74589492 74589702 + 10.7 0.000 intron (NM_001369123, intron 8 of 9) intron (NM_001369123, intron 8 of 9) -60273 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr21-1081 chr21 32566251 32566461 + 10.7 0.000 non-coding (NR_146638, exon 11 of 11) non-coding (NR_146638, exon 11 of 11) 19167 NM_144659 140290 Hs.728804 NM_018277 ENSG00000242220 TCP10L C21orf77|PRED77|TCP10A-1|TCP10A-2 t-complex 10 like protein-coding chr4-2459 chr4 185067879 185068089 + 10.7 0.000 intron (NR_147059, intron 3 of 8) L2b|LINE|L2 16088 NR_147059 101928877 Hs.246506 NR_147059 ENSG00000250754 LINC02436 - long intergenic non-protein coding RNA 2436 ncRNA chr2-10135 chr2 71359283 71359493 + 10.7 0.000 intron (NM_001252613, intron 3 of 27) MLT2B3|LTR|ERVL 27606 NM_014497 27332 Hs.434401 NM_014497 ENSG00000075292 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding chr9-3407 chr9 132857115 132857325 + 10.7 0.000 intron (NM_001317959, intron 5 of 14) MER5A|DNA|hAT-Charlie -21124 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr22-1662 chr22 41517783 41517993 + 10.7 0.000 intron (NM_001098, intron 7 of 17) intron (NM_001098, intron 7 of 17) 26582 NM_001018050 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding chr13-1666 chr13 74930424 74930634 + 10.7 0.000 Intergenic Intergenic 309852 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr4-3629 chr4 13207791 13208001 + 10.7 0.000 Intergenic L2a|LINE|L2 276444 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr2-10061 chr2 38921518 38921728 + 10.7 0.000 intron (NM_001145451, intron 2 of 15) FLAM_A|SINE|Alu 2260 NM_001145451 100271715 Hs.99841 NM_001145451 ENSG00000214694 ARHGEF33 - Rho guanine nucleotide exchange factor 33 protein-coding chr21-261 chr21 44304996 44305206 + 10.7 0.000 intron (NM_001002021, intron 2 of 24) MIRc|SINE|MIR 5048 NM_002626 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr22-4262 chr22 48563915 48564125 + 10.7 0.000 intron (NM_001082967, intron 1 of 3) LTR16C|LTR|ERVL -12320 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr2-6738 chr2 35832773 35832983 + 10.7 0.000 Intergenic L2a|LINE|L2 361473 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr13-1371 chr13 96822963 96823173 + 10.7 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 161104 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr19-1663 chr19 55210036 55210246 + 10.7 0.000 promoter-TSS (NM_001161440) promoter-TSS (NM_001161440) -640 NM_002842 5794 Hs.179770 NM_002842 ENSG00000080031 PTPRH R-PTP-H|SAP1 protein tyrosine phosphatase receptor type H protein-coding chr13-2400 chr13 42570635 42570845 + 10.7 0.000 intron (NM_033012, intron 2 of 6) intron (NM_033012, intron 2 of 6) -3412 NM_003701 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr5-3399 chr5 143054713 143054923 + 10.7 0.000 intron (NR_146198, intron 15 of 22) intron (NR_146198, intron 15 of 22) -137682 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr5-7460 chr5 32562503 32562713 + 10.7 0.000 Intergenic MER34D|LTR|ERV1 -22949 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr7-5831 chr7 85314583 85314793 + 10.7 0.000 Intergenic Intergenic -106434 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr4-3351 chr4 3948313 3948523 + 10.7 0.000 intron (NR_130741, intron 2 of 3) L1MD2|LINE|L1 7010 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr9-4990 chr9 21390950 21391160 + 10.7 0.000 Intergenic Intergenic -5657 NM_000605 3440 Hs.211575 NM_000605 ENSG00000188379 IFNA2 IFN-alphaA|IFNA|IFNA2B|INFA2 interferon alpha 2 protein-coding chr6-2597 chr6 106943863 106944073 + 10.7 0.000 Intergenic HAL1|LINE|L1 30071 NM_001291739 100133941 Hs.644105 NM_013230 ENSG00000272398 CD24 CD24A CD24 molecule protein-coding chr4-3696 chr4 55442429 55442639 + 10.7 0.000 exon (NM_001267843, exon 22 of 24) exon (NM_001267843, exon 22 of 24) 46577 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr3-11221 chr3 194810088 194810298 + 10.7 0.000 Intergenic L2b|LINE|L2 -41484 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr7-2418 chr7 91242240 91242450 + 10.7 0.000 Intergenic Intergenic -22088 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr4-4431 chr4 52039163 52039373 + 10.7 0.000 promoter-TSS (NM_000232) promoter-TSS (NM_000232) -949 NM_000232 6443 Hs.438953 NM_000232 ENSG00000163069 SGCB A3b|LGMD2E|LGMDR4|SGC sarcoglycan beta protein-coding chr1-3664 chr1 112445979 112446189 + 10.7 0.000 intron (NM_018704, intron 3 of 5) intron (NM_018704, intron 3 of 5) 15749 NR_036210 100422976 NR_036210 ENSG00000283296 MIR4256 - microRNA 4256 ncRNA chr18-2193 chr18 61017519 61017729 + 10.7 0.000 Intergenic Intergenic -315806 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr12-8289 chr12 125974314 125974524 + 10.7 0.000 intron (NR_034132, intron 1 of 5) MER11D|LTR|ERVK 8955 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr18-1401 chr18 76660391 76660601 + 10.7 0.000 Intergenic Intergenic -21485 NR_110784 101927651 Hs.569848 NR_110784 LINC01927 - long intergenic non-protein coding RNA 1927 ncRNA chr4-2455 chr4 177094502 177094712 + 10.7 0.000 Intergenic Intergenic -215267 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chrX-1005 chrX 40644761 40644971 + 10.7 0.000 intron (NM_001330455, intron 2 of 6) L2|LINE|L2 2695 NM_144970 159013 Hs.495961 NM_144970 ENSG00000185753 CXorf38 - chromosome X open reading frame 38 protein-coding chr4-2361 chr4 3444874 3445084 + 10.7 0.000 exon (NM_001297439, exon 8 of 15) exon (NM_001297439, exon 8 of 15) 3011 NM_001297439 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr22-1563 chr22 39840513 39840723 + 10.7 0.000 intron (NM_152512, intron 3 of 6) intron (NM_152512, intron 3 of 6) 53142 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr17-3993 chr17 68019777 68019987 + 10.7 0.000 Intergenic Intergenic -15853 NM_002266 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr17-3547 chr17 75832192 75832402 + 10.7 0.000 intron (NM_199242, intron 25 of 31) MIR|SINE|MIR 12420 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr16-6534 chr16 63498221 63498431 + 10.7 0.000 Intergenic Intergenic -1461888 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr1-15464 chr1 154609259 154609469 + 10.7 0.000 promoter-TSS (NM_001365048) promoter-TSS (NM_001365048) -567 NM_001365048 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr5-8567 chr5 136508797 136509007 + 10.7 0.000 Intergenic Intergenic -143426 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr5-1678 chr5 66770474 66770684 + 10.7 0.000 intron (NM_001290228, intron 2 of 4) intron (NM_001290228, intron 2 of 4) -58194 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr10-4543 chr10 98551864 98552074 + 10.7 0.000 intron (NM_021828, intron 9 of 11) intron (NM_021828, intron 9 of 11) -105006 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr8-1388 chr8 23574419 23574629 + 10.7 0.000 3' UTR (NM_001317813, exon 5 of 5) 3' UTR (NM_001317813, exon 5 of 5) 45568 NM_016612 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr3-6516 chr3 114111002 114111212 + 10.7 0.000 Intergenic L3|LINE|CR1 54370 NM_001256835 79691 Hs.477162 NM_024638 ENSG00000151576 QTRT2 QTRTD1 queuine tRNA-ribosyltransferase accessory subunit 2 protein-coding chr16-3544 chr16 48613496 48613706 + 10.7 0.000 Intergenic MIR|SINE|MIR -3421 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr16-2856 chr16 85724613 85724823 + 10.7 0.000 intron (NR_161452, intron 2 of 4) intron (NR_161452, intron 2 of 4) 16982 NR_031731 100302261 NR_031731 ENSG00000283416 MIR1910 MIRN1910|hsa-mir-1910|mir-1910 microRNA 1910 ncRNA chr18-2894 chr18 11150212 11150422 + 10.7 0.000 Intergenic Intergenic -1555 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr5-3474 chr5 170632460 170632670 + 10.7 0.000 intron (NM_001278339, intron 1 of 7) MIR3|SINE|MIR 48905 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr10-2054 chr10 92243333 92243543 + 10.7 0.000 promoter-TSS (NM_001178137) promoter-TSS (NM_001178137) -159 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr9-2501 chr9 96199211 96199421 + 10.7 0.000 Intergenic Intergenic -47147 NR_146524 105376162 Hs.662614 NR_146524 ENSG00000232283 HSD17B3-AS1 - HSD17B3 antisense RNA 1 ncRNA chr11-3429 chr11 58509825 58510035 + 10.7 0.000 Intergenic MER20|DNA|hAT-Charlie -1825 NM_001005218 219968 Hs.553647 NM_001005218 ENSG00000198283 OR5B21 - olfactory receptor family 5 subfamily B member 21 protein-coding chr2-5289 chr2 66915227 66915437 + 10.7 0.000 intron (NR_110169, intron 1 of 4) MIRc|SINE|MIR 7158 NR_110600 102724321 Hs.146803 NR_110600 ENSG00000232688 LINC01628 - long intergenic non-protein coding RNA 1628 ncRNA chr11-2749 chr11 46719534 46719744 + 10.7 0.000 intron (NM_000506, intron 1 of 13) intron (NM_000506, intron 1 of 13) 426 NM_001311257 2147 Hs.655207 NM_000506 ENSG00000180210 F2 PT|RPRGL2|THPH1 coagulation factor II, thrombin protein-coding chr9-8152 chr9 103578849 103579059 + 10.7 0.000 Intergenic L1MA4|LINE|L1 -253921 NR_121578 101928496 Hs.410860 NR_121578 ENSG00000225564 LINC01492 - long intergenic non-protein coding RNA 1492 ncRNA chr5-4599 chr5 31107718 31107928 + 10.7 0.000 Intergenic Intergenic -85863 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr10-7099 chr10 95943967 95944177 + 10.7 0.000 intron (NM_001349008, intron 9 of 34) intron (NM_001349008, intron 9 of 34) 36107 NM_001349008 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr5-8348 chr5 119730538 119730748 + 10.7 0.000 Intergenic Tigger12|DNA|TcMar-Tigger 101084 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr1-4988 chr1 60133051 60133261 + 10.7 0.000 Intergenic Intergenic -59386 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr15-3533 chr15 100968502 100968712 + 10.7 0.000 intron (NM_024652, intron 2 of 33) L1ME2z|LINE|L1 49250 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr4-1132 chr4 1899250 1899460 + 10.7 0.000 5' UTR (NM_133330, exon 3 of 24) 5' UTR (NM_133330, exon 3 of 24) -1271 NM_133334 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr20-1271 chr20 45600824 45601034 + 10.7 0.000 Intergenic Intergenic -21645 NM_181510 90199 Hs.116128 NM_130896 ENSG00000158901 WFDC8 C20orf170|HEL-S-292|WAP8|dJ461P17.1 WAP four-disulfide core domain 8 protein-coding chr11-7261 chr11 17549232 17549442 + 10.7 0.000 intron (NM_001277269, intron 2 of 54) intron (NM_001277269, intron 2 of 54) 1964 NM_001277269 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding chr19-6294 chr19 8384595 8384805 + 10.7 0.000 intron (NR_038237, intron 1 of 2) HERV9NC-int|LTR|ERV1 4680 NR_049795 100847049 NR_049795 ENSG00000265390 MIR4999 mir-4999 microRNA 4999 ncRNA chr2-1593 chr2 112481910 112482120 + 10.7 0.000 promoter-TSS (NM_153712) promoter-TSS (NM_153712) -141 NM_153712 150465 Hs.358997 NM_153712 ENSG00000114999 TTL - tubulin tyrosine ligase protein-coding chr19-3580 chr19 48232018 48232228 + 10.7 0.000 intron (NM_001351792, intron 5 of 10) intron (NM_001351792, intron 5 of 10) 8940 NR_033679 22900 Hs.68846 NM_014959 ENSG00000105483 CARD8 CARDINAL|DACAR|DAKAR|NDPP|NDPP1|TUCAN caspase recruitment domain family member 8 protein-coding chr9-3583 chr9 75970312 75970522 + 10.7 0.000 intron (NR_120409, intron 2 of 19) intron (NR_120409, intron 2 of 19) 79744 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr9-3345 chr9 107347758 107347968 + 10.7 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 63094 NM_001244713 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr4-3108 chr4 157003872 157004082 + 10.7 0.000 Intergenic Intergenic -32178 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr20-1826 chr20 63751217 63751427 + 10.7 0.000 intron (NM_001369741, intron 4 of 4) intron (NM_001369741, intron 4 of 4) 11546 NM_020062 56731 Hs.435126 NM_020062 ENSG00000125520 SLC2A4RG GEF|HDBP-1|HDBP1|Si-1-2|Si-1-2-19 SLC2A4 regulator protein-coding chr18-2254 chr18 71393952 71394162 + 10.7 0.000 Intergenic Intergenic 184899 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr5-6762 chr5 82421392 82421602 + 10.7 0.000 Intergenic Intergenic 142035 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr7-5896 chr7 95117988 95118198 + 10.7 0.000 intron (NM_017650, intron 3 of 15) intron (NM_017650, intron 3 of 15) 206439 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr14-1040 chr14 101402968 101403178 + 10.7 0.000 Intergenic MIR|SINE|MIR 4849 NR_126006 338002 Hs.124848 NR_126006 ENSG00000259023 LINC00524 C14orf71 long intergenic non-protein coding RNA 524 ncRNA chr3-3248 chr3 48112675 48112885 + 10.7 0.000 Intergenic MER21-int|LTR|ERVL -23932 NM_002375 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr7-6987 chr7 109235232 109235442 + 10.7 0.000 Intergenic LTR40b|LTR|ERVL -350750 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr12-2570 chr12 111675527 111675737 + 10.7 0.000 intron (NM_006768, intron 4 of 11) intron (NM_006768, intron 4 of 11) 10324 NM_006768 8315 Hs.530940 NM_006768 ENSG00000089234 BRAP BRAP2|IMP|RNF52 BRCA1 associated protein protein-coding chr5-1148 chr5 151678246 151678456 + 10.7 0.000 intron (NR_109873, intron 1 of 4) intron (NR_109873, intron 1 of 4) 1406 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr21-321 chr21 33854830 33855040 + 10.7 0.000 intron (NM_001331010, intron 28 of 38) intron (NM_001331010, intron 28 of 38) 60869 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr4-1624 chr4 74268342 74268552 + 10.7 0.000 intron (NR_147097, intron 8 of 9) MIRc|SINE|MIR -40023 NM_001270991 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr11-4011 chr11 6618820 6619030 + 10.7 0.000 intron (NM_000391, intron 2 of 12) intron (NM_000391, intron 2 of 12) 497 NM_000391 1200 Hs.523454 NM_000391 ENSG00000166340 TPP1 CLN2|GIG1|LPIC|SCAR7|TPP-1 tripeptidyl peptidase 1 protein-coding chr2-7523 chr2 21065177 21065387 + 10.7 0.000 Intergenic Intergenic -21209 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr21-446 chr21 42247220 42247430 + 10.7 0.000 intron (NM_207627, intron 3 of 15) intron (NM_207627, intron 3 of 15) 27427 NM_207174 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr21-1048 chr21 27380295 27380505 + 10.7 0.000 Intergenic Intergenic -341979 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chrX-3301 chrX 112436188 112436398 + 10.7 0.000 intron (NM_001004308, intron 2 of 2) intron (NM_001004308, intron 2 of 2) 243645 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr13-1344 chr13 43883768 43883978 + 10.7 0.000 exon (NM_001350641, exon 5 of 8) exon (NM_001350641, exon 5 of 8) 3969 NM_153218 144811 Hs.210586 NM_153218 ENSG00000179630 LACC1 C13orf31|FAMIN laccase domain containing 1 protein-coding chr5-5663 chr5 159049827 159050037 + 10.7 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 48024 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chrX-5403 chrX 152868586 152868796 + 10.7 0.000 intron (NM_001129765, intron 8 of 8) intron (NM_001129765, intron 8 of 8) 37628 NM_015922 50814 Hs.57698 NM_015922 ENSG00000147383 NSDHL H105E3|SDR31E1|XAP104 NAD(P) dependent steroid dehydrogenase-like protein-coding chr17-4324 chr17 81962918 81963128 + 10.7 0.000 Intergenic Intergenic -1836 NM_178493 147111 Hs.106137 NM_178493 ENSG00000185269 NOTUM hNOTUM notum, palmitoleoyl-protein carboxylesterase protein-coding chr11-4764 chr11 117748937 117749147 + 10.7 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 48174 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr7-2478 chr7 2606467 2606677 + 10.7 0.000 intron (NM_001287501, intron 18 of 19) intron (NM_001287501, intron 18 of 19) -25414 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr22-854 chr22 28029252 28029462 + 10.7 0.000 intron (NM_001145418, intron 13 of 22) intron (NM_001145418, intron 13 of 22) -108745 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr1-6061 chr1 91502933 91503143 + 10.7 0.000 intron (NM_001134420, intron 2 of 11) intron (NM_001134420, intron 2 of 11) 1930 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr19-2330 chr19 38422246 38422456 + 10.7 0.000 intron (NM_001146202, intron 1 of 16) intron (NM_001146202, intron 1 of 16) 3868 NM_001146204 115727 Hs.130434 NM_052949 ENSG00000171777 RASGRP4 - RAS guanyl releasing protein 4 protein-coding chr11-4774 chr11 122045326 122045536 + 10.7 0.000 intron (NR_137178, intron 3 of 4) intron (NR_137178, intron 3 of 4) 54413 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr6-4435 chr6 33941877 33942087 + 10.7 0.000 Intergenic Intergenic 42847 NR_106982 102466816 NR_106982 ENSG00000276824 MIR7159 hsa-mir-7159 microRNA 7159 ncRNA chr8-2886 chr8 142346624 142346834 + 10.7 0.000 intron (NM_001366903, intron 2 of 9) intron (NM_001366903, intron 2 of 9) 56453 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr18-384 chr18 57803158 57803368 + 10.7 0.000 promoter-TSS (NM_005603) promoter-TSS (NM_005603) 52 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr8-2504 chr8 19182100 19182310 + 10.7 0.000 Intergenic Intergenic 63317 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr15-2210 chr15 90930054 90930264 + 10.7 0.000 promoter-TSS (NM_001039675) promoter-TSS (NM_001039675) -21 NM_001039675 55898 Hs.389461 NM_017979 ENSG00000140553 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 myosin chaperone A protein-coding chr11-3333 chr11 117166627 117166837 + 10.7 0.000 intron (NM_001184747, intron 5 of 5) L4_A_Mam|LINE|RTE-X -12011 NM_001040455 51092 Hs.712144 NM_015996 ENSG00000149577 SIDT2 CGI-40 SID1 transmembrane family member 2 protein-coding chrX-5221 chrX 135710142 135710352 + 10.7 0.000 Intergenic Intergenic -3206 NM_001017417 541466 Hs.460937 NM_001017417 ENSG00000268940 CT45A1 CT45|CT45-1|CT45.1 cancer/testis antigen family 45 member A1 protein-coding chr16-6335 chr16 49663804 49664014 + 10.7 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) 415 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr11-6104 chr11 35553739 35553949 + 10.7 0.000 Intergenic Intergenic -23544 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr7-1903 chr7 1071797 1072007 + 10.7 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) -14905 NM_001039966 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr5-2639 chr5 181115054 181115264 + 10.7 0.000 Intergenic CpG 10145 NM_001258283 26693 Hs.742585 NM_001258283 ENSG00000185372 OR2V1 OR2V1P|OST265 olfactory receptor family 2 subfamily V member 1 protein-coding chrX-1719 chrX 23953235 23953445 + 10.7 0.000 Intergenic LTR16C|LTR|ERVL 45334 NM_152761 254158 Hs.351265 NM_152761 ENSG00000165182 CXorf58 - chromosome X open reading frame 58 protein-coding chr9-2371 chr9 121156465 121156675 + 10.7 0.000 intron (NR_163191, intron 16 of 18) intron (NR_163191, intron 16 of 18) 34800 NR_163191 11064 Hs.653263 NM_007018 ENSG00000119397 CNTRL CEP1|CEP110|FAN|bA165P4.1 centriolin protein-coding chr14-2226 chr14 103861893 103862103 + 10.7 0.000 Intergenic Intergenic 14277 NR_038436 145216 Hs.578091 NR_038436 ENSG00000258735 LINC00637 - long intergenic non-protein coding RNA 637 ncRNA chrX-3667 chrX 103678458 103678668 + 10.7 0.000 5' UTR (NM_001142429, exon 4 of 5) 5' UTR (NM_001142429, exon 4 of 5) 8136 NM_012286 9643 Hs.326387 NM_012286 ENSG00000123562 MORF4L2 MORFL2|MRGX mortality factor 4 like 2 protein-coding chr15-4435 chr15 45266709 45266919 + 10.7 0.000 intron (NM_004212, intron 10 of 17) L2c|LINE|L2 12408 NR_120335 101928414 NR_120335 ENSG00000259520 LOC101928414 - uncharacterized LOC101928414 ncRNA chr7-3355 chr7 94183492 94183702 + 10.7 0.000 Intergenic Intergenic -179242 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr3-4086 chr3 101890875 101891085 + 10.7 0.000 Intergenic LTR54|LTR|ERV1 41466 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr5-3980 chr5 14016657 14016867 + 10.7 0.000 Intergenic Intergenic -72282 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr9-3347 chr9 109011390 109011600 + 10.7 0.000 intron (NM_003798, intron 1 of 18) intron (NM_003798, intron 1 of 18) 2004 NM_001286974 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr12-4986 chr12 78000078 78000288 + 10.7 0.000 intron (NM_001024383, intron 7 of 39) intron (NM_001024383, intron 7 of 39) 169289 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr9-5253 chr9 78967659 78967869 + 10.7 0.000 Intergenic Intergenic 177902 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr5-6691 chr5 63205882 63206092 + 10.7 0.000 Intergenic Intergenic 627168 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr5-2661 chr5 14850130 14850340 + 10.7 0.000 intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 21543 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr12-5253 chr12 109506746 109506956 + 10.7 0.000 intron (NM_130466, intron 14 of 27) MER57C2|LTR|ERV1 29217 NM_130466 89910 Hs.374067 NM_130466 ENSG00000151148 UBE3B BPIDS|KOS ubiquitin protein ligase E3B protein-coding chr12-841 chr12 112419008 112419218 + 10.7 0.000 promoter-TSS (NM_001320141) promoter-TSS (NM_001320141) 166 NM_080601 5781 Hs.506852 NM_002834 ENSG00000179295 PTPN11 BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase non-receptor type 11 protein-coding chrX-496 chrX 48539505 48539715 + 10.7 0.000 promoter-TSS (NM_002536) promoter-TSS (NM_002536) -9 NR_145500 4943 Hs.694353 NM_002536 ENSG00000068354 TBC1D25 MG81|OATL1 TBC1 domain family member 25 protein-coding chr9-2034 chr9 137077025 137077235 + 10.7 0.000 promoter-TSS (NM_207309) promoter-TSS (NM_207309) -387 NM_207309 91373 Hs.142076 NM_207309 ENSG00000197355 UAP1L1 - UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 protein-coding chr5-3221 chr5 90858341 90858551 + 10.7 0.000 intron (NR_003149, intron 82 of 89) intron (NR_003149, intron 82 of 89) 299649 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr1-10668 chr1 184298392 184298602 + 10.7 0.000 Intergenic Intergenic -88532 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr5-1766 chr5 14406545 14406755 + 10.7 0.000 non-coding (NR_134469, exon 33 of 57) non-coding (NR_134469, exon 33 of 57) -57333 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chrX-830 chrX 108209686 108209896 + 10.7 0.000 intron (NM_001287758, intron 8 of 45) intron (NM_001287758, intron 8 of 45) 118013 NM_052936 115201 Hs.8763 NM_052936 ENSG00000101844 ATG4A APG4A|AUTL2 autophagy related 4A cysteine peptidase protein-coding chr5-3331 chr5 133299053 133299263 + 10.7 0.000 intron (NM_015082, intron 6 of 15) intron (NM_015082, intron 6 of 15) 128548 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr10-9027 chr10 123096611 123096821 + 10.7 0.000 Intergenic Intergenic -39254 NM_001105574 340784 Hs.531194 NM_001105574 ENSG00000188620 HMX3 NKX-5.1|NKX5.1|Nkx5-1 H6 family homeobox 3 protein-coding chr4-3460 chr4 106034300 106034510 + 10.7 0.000 Intergenic Intergenic -11927 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chr22-1086 chr22 29945613 29945823 + 10.7 0.000 intron (NM_153051, intron 1 of 18) AluJr|SINE|Alu -61331 NR_106876 102466742 NR_106876 ENSG00000275818 MIR6818 hsa-mir-6818 microRNA 6818 ncRNA chr2-6866 chr2 75047746 75047956 + 10.7 0.000 3' UTR (NM_001058, exon 5 of 5) 3' UTR (NM_001058, exon 5 of 5) -42961 NR_049796 100846995 NR_049796 ENSG00000263909 MIR5000 - microRNA 5000 ncRNA chr19-2126 chr19 2071375 2071585 + 10.7 0.000 3' UTR (NM_130807, exon 5 of 5) 3' UTR (NM_130807, exon 5 of 5) -20236 NM_199054 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr4-6134 chr4 26862501 26862711 + 10.7 0.000 intron (NM_001169118, intron 1 of 12) intron (NM_001169118, intron 1 of 12) 1765 NM_001169118 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chr2-13802 chr2 174281511 174281721 + 10.7 0.000 Intergenic Intergenic -33084 NM_001328688 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr4-3136 chr4 173708655 173708865 + 10.7 0.000 Intergenic Intergenic 178302 NR_003679 79804 Hs.61435 NR_003679 ENSG00000237125 HAND2-AS1 DEIN|NBLA00301|UPH HAND2 antisense RNA 1 ncRNA chr1-8938 chr1 7925249 7925459 + 10.7 0.000 intron (NM_001561, intron 8 of 8) Tigger3b|DNA|TcMar-Tigger 17811 NM_001561 3604 Hs.86447 NM_001561 ENSG00000049249 TNFRSF9 4-1BB|CD137|CDw137|ILA TNF receptor superfamily member 9 protein-coding chr17-2544 chr17 39451254 39451464 + 10.7 0.000 promoter-TSS (NM_004774) promoter-TSS (NM_004774) -96 NM_004774 5469 Hs.643754 NM_004774 ENSG00000125686 MED1 CRSP1|CRSP200|DRIP205|DRIP230|PBP|PPARBP|PPARGBP|RB18A|TRAP220|TRIP2 mediator complex subunit 1 protein-coding chr20-4435 chr20 61414721 61414931 + 10.7 0.000 intron (NM_001794, intron 2 of 15) intron (NM_001794, intron 2 of 15) -84595 NM_001252338 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr14-1830 chr14 52834618 52834828 + 10.7 0.000 Intergenic Intergenic -43116 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding chr13-1695 chr13 80336995 80337205 + 10.7 0.000 exon (NM_001318538, exon 2 of 2) exon (NM_001318538, exon 2 of 2) 2559 NM_001318538 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr7-5811 chr7 82367156 82367366 + 10.7 0.000 intron (NM_000722, intron 1 of 38) L1PA16|LINE|L1 76516 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr8-846 chr8 142597329 142597539 + 10.7 0.000 Intergenic Intergenic 17045 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr7-3607 chr7 31922686 31922896 + 10.7 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 147616 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr8-2119 chr8 143347763 143347973 + 10.7 0.000 intron (NM_001258447, intron 1 of 13) intron (NM_001258447, intron 1 of 13) 12109 NM_001258446 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr1-5795 chr1 177948521 177948731 + 10.7 0.000 intron (NR_151492, intron 21 of 22) intron (NR_151492, intron 21 of 22) 21296 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr7-8165 chr7 29573669 29573879 + 10.7 0.000 Intergenic Intergenic 8241 NM_001329997 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding chr19-1242 chr19 44955226 44955436 + 10.7 0.000 promoter-TSS (NM_001294) promoter-TSS (NM_001294) -49 NM_001294 1209 Hs.444441 NM_001294 ENSG00000104853 CLPTM1 - CLPTM1 regulator of GABA type A receptor forward trafficking protein-coding chr3-5868 chr3 35499128 35499338 + 10.7 0.000 Intergenic L1MC1|LINE|L1 -105210 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr2-12980 chr2 105350748 105350958 + 10.7 0.000 Intergenic L1MC3|LINE|L1 13313 NM_024093 79074 Hs.549577 NM_024093 ENSG00000135974 C2orf49 asw chromosome 2 open reading frame 49 protein-coding chr11-4656 chr11 46555349 46555559 + 10.7 0.000 intron (NM_001267782, intron 1 of 19) MIRb|SINE|MIR 31990 NR_160027 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr1-4845 chr1 27074932 27075142 + 10.7 0.000 Intergenic Intergenic -62187 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr1-6320 chr1 3060192 3060402 + 10.7 0.000 intron (NR_015440, intron 4 of 5) intron (NR_015440, intron 4 of 5) 7428 NR_024371 440556 Hs.531041 NM_198543 ENSG00000177133 PRDM16-DT LINC00982|lnc-dPrdm16 PRDM16 divergent transcript ncRNA chr13-1419 chr13 35900424 35900634 + 10.7 0.000 intron (NM_001330071, intron 4 of 16) AluSz6|SINE|Alu -44668 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr16-2200 chr16 82937077 82937287 + 10.7 0.000 intron (NM_001220490, intron 2 of 12) intron (NM_001220490, intron 2 of 12) 53116 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr1-4058 chr1 205493300 205493510 + 10.7 0.000 Intergenic Intergenic -11264 NM_212502 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr10-2976 chr10 72340437 72340647 + 10.7 0.000 intron (NR_157570, intron 5 of 8) intron (NR_157570, intron 5 of 8) 14377 NM_001365081 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr19-1949 chr19 41918527 41918737 + 10.7 0.000 intron (NM_001365103, intron 1 of 5) (AC)n|Simple_repeat|Simple_repeat 10089 NM_001365103 390937 Hs.590950 NM_001365103 ENSG00000268041 LOC390937 - ETS domain-containing transcription factor ERF protein-coding chr12-2914 chr12 56187664 56187874 + 10.7 0.000 intron (NM_001330288, intron 1 of 28) intron (NM_001330288, intron 1 of 28) 1714 NM_001330288 6601 Hs.236030 NM_003075 ENSG00000139613 SMARCC2 BAF170|CRACC2|CSS8|Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 protein-coding chr7-2302 chr7 84568814 84569024 + 10.7 0.000 intron (NR_110079, intron 2 of 2) intron (NR_110079, intron 2 of 2) 36443 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr7-4549 chr7 3033150 3033360 + 10.7 0.000 intron (NM_001324281, intron 1 of 25) MLT1B|LTR|ERVL-MaLR 10612 NM_001324281 84433 Hs.648101 NM_032415 ENSG00000198286 CARD11 BENTA|BIMP3|CARMA1|IMD11|IMD11A|PPBL caspase recruitment domain family member 11 protein-coding chr20-1588 chr20 4171620 4171830 + 10.7 0.000 intron (NM_001270691, intron 1 of 7) intron (NM_001270691, intron 1 of 7) -21365 NR_033917 728228 Hs.636379 NR_033917 ENSG00000230176 LINC01433 - long intergenic non-protein coding RNA 1433 ncRNA chr15-823 chr15 91866429 91866639 + 10.7 0.000 intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 12230 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr17-6171 chr17 82570884 82571094 + 10.7 0.000 intron (NM_004514, intron 3 of 8) intron (NM_004514, intron 3 of 8) 51257 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr1-4894 chr1 36708084 36708294 + 10.7 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -224875 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr1-15707 chr1 169419911 169420121 + 10.7 0.000 intron (NM_001300969, intron 3 of 5) intron (NM_001300969, intron 3 of 5) 7458 NM_021179 57821 Hs.567557 NM_021179 ENSG00000117477 CCDC181 C1orf114 coiled-coil domain containing 181 protein-coding chr4-1877 chr4 1913158 1913368 + 10.7 0.000 intron (NM_133334, intron 2 of 8) LTR13|LTR|ERVK 12637 NM_133334 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr8-5864 chr8 13612475 13612685 + 10.7 0.000 Intergenic Intergenic -7960 NM_001348082 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr5-2538 chr5 169914835 169915045 + 10.7 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 65555 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr1-3670 chr1 151399490 151399700 + 10.7 0.000 promoter-TSS (NM_002796) promoter-TSS (NM_002796) 22 NM_002796 5692 Hs.89545 NM_002796 ENSG00000159377 PSMB4 HN3|HsN3|PRAAS3|PROS-26|PROS26 proteasome subunit beta 4 protein-coding chr2-2666 chr2 221212495 221212705 + 10.7 0.000 Intergenic Intergenic 359704 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-1632 chr3 64674675 64674885 + 10.7 0.000 intron (NM_001318781, intron 3 of 38) intron (NM_001318781, intron 3 of 38) -10090 NR_038264 100507098 Hs.660881 NR_038264 ENSG00000241684 ADAMTS9-AS2 - ADAMTS9 antisense RNA 2 ncRNA chr12-2006 chr12 12896453 12896663 + 10.7 0.000 intron (NM_003979, intron 1 of 3) intron (NM_003979, intron 1 of 3) 5536 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr19-4162 chr19 38499524 38499734 + 10.7 0.000 intron (NM_001042723, intron 43 of 104) CpG 65929 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr6-6908 chr6 13631371 13631581 + 10.7 0.000 intron (NM_005493, intron 12 of 13) Tigger4a|DNA|TcMar-Tigger 16141 NM_016167 51406 Hs.306242 NM_016167 ENSG00000225921 NOL7 C6orf90|PQBP3|RARG-1|dJ223E5.2 nucleolar protein 7 protein-coding chr17-1428 chr17 4143652 4143862 + 10.7 0.000 promoter-TSS (NM_015113) promoter-TSS (NM_015113) 60 NM_001254755 124936 Hs.513871 NM_144611 ENSG00000167740 CYB5D2 - cytochrome b5 domain containing 2 protein-coding chr7-3287 chr7 28484508 28484718 + 10.7 0.000 intron (NM_004904, intron 1 of 10) intron (NM_004904, intron 1 of 10) 48998 NM_004904 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr15-2174 chr15 79832175 79832385 + 10.7 0.000 Intergenic Intergenic 64717 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr12-4775 chr12 53181167 53181377 + 10.7 0.000 promoter-TSS (NM_015989) promoter-TSS (NM_015989) -347 NM_001244705 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr3-3574 chr3 53648075 53648285 + 10.7 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 153569 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr5-4748 chr5 52554214 52554424 + 10.7 0.000 Intergenic Intergenic -233597 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr22-881 chr22 45885747 45885957 + 10.7 0.000 Intergenic Intergenic 91310 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr6-8418 chr6 151182080 151182290 + 10.7 0.000 Intergenic Intergenic 46272 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr18-516 chr18 48961638 48961848 + 10.7 0.000 Intergenic MER41A|LTR|ERV1 -11032 NM_001190821 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr18-1374 chr18 42979605 42979815 + 10.7 0.000 intron (NM_001272077, intron 2 of 5) intron (NM_001272077, intron 2 of 5) 135975 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr19-3460 chr19 32404661 32404871 + 10.7 0.000 intron (NR_046201, intron 1 of 2) AluJr|SINE|Alu 773 NR_046201 400684 Hs.438766 NR_046201 ENSG00000267213 LOC400684 - uncharacterized LOC400684 ncRNA chr2-2361 chr2 218395866 218396076 + 10.7 0.000 3' UTR (NM_000578, exon 15 of 15) 3' UTR (NM_000578, exon 15 of 15) -2262 NM_001206878 58190 Hs.444468 NM_021198 ENSG00000144579 CTDSP1 NIF3|NLI-IF|NLIIF|SCP1 CTD small phosphatase 1 protein-coding chr2-2505 chr2 164014368 164014578 + 10.7 0.000 Intergenic Intergenic -278465 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr7-6461 chr7 2091656 2091866 + 10.7 0.000 intron (NM_001013837, intron 11 of 18) AluY|SINE|Alu -2709 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr11-2642 chr11 46681060 46681270 + 10.7 0.000 intron (NM_004308, intron 6 of 12) intron (NM_004308, intron 6 of 12) 19454 NM_004308 392 Hs.138860 NM_004308 ENSG00000175220 ARHGAP1 CDC42GAP|RHOGAP|RHOGAP1|p50rhoGAP Rho GTPase activating protein 1 protein-coding chr22-1479 chr22 22819083 22819293 + 10.7 0.000 Intergenic Intergenic -3588 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr10-3861 chr10 28774145 28774355 + 10.7 0.000 intron (NR_120652, intron 2 of 3) HAL1ME|LINE|L1 21800 NR_038375 100507605 Hs.119207 NR_038374 ENSG00000235824 LINC00837 - long intergenic non-protein coding RNA 837 ncRNA chr8-4036 chr8 60689135 60689345 + 10.7 0.000 intron (NM_017780, intron 1 of 37) L1MC4|LINE|L1 10500 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chrX-3393 chrX 3424452 3424662 + 10.7 0.000 Intergenic L1PB4|LINE|L1 -77905 NM_015419 25878 Hs.369422 NM_015419 ENSG00000101825 MXRA5 - matrix remodeling associated 5 protein-coding chr11-2994 chr11 118229593 118229803 + 10.7 0.000 non-coding (NR_104404, exon 3 of 3) non-coding (NR_104404, exon 3 of 3) -4687 NM_001098526 120425 Hs.16291 NM_153206 ENSG00000160593 JAML AMICA|AMICA1|CREA7-1|CREA7-4|Gm638 junction adhesion molecule like protein-coding chr11-5418 chr11 68588279 68588489 + 10.7 0.000 intron (NR_147971, intron 17 of 24) AluSq2|SINE|Alu -96160 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr1-9058 chr1 14745758 14745968 + 10.7 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) 147146 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr1-13871 chr1 21409852 21410062 + 10.7 0.000 Intergenic THE1B|LTR|ERVL-MaLR -30180 NR_046176 84224 Hs.325422 NM_032264 ENSG00000142794 NBPF3 AE2 NBPF member 3 protein-coding chr9-3099 chr9 36765688 36765898 + 10.7 0.000 Intergenic Intergenic 57806 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chrX-810 chrX 71128877 71129087 + 10.7 0.000 intron (NM_005120, intron 24 of 44) intron (NM_005120, intron 24 of 44) 10386 NM_005120 9968 Hs.409226 NM_005120 ENSG00000184634 MED12 ARC240|CAGH45|FGS1|HOPA|MED12S|OHDOX|OKS|OPA1|TNRC11|TRAP230 mediator complex subunit 12 protein-coding chr18-1099 chr18 60205009 60205219 + 10.7 0.000 Intergenic Intergenic 167661 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr21-799 chr21 45976454 45976664 + 10.7 0.000 Intergenic MER11C|LTR|ERVK 3589 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr11-4203 chr11 62215424 62215634 + 10.7 0.000 Intergenic HERVIP10F-int|LTR|ERV1 6856 NM_002407 4246 Hs.97644 NM_002407 ENSG00000124939 SCGB2A1 LPHC|LPNC|MGB2|UGB3 secretoglobin family 2A member 1 protein-coding chr1-9414 chr1 32121175 32121385 + 10.7 0.000 intron (NM_012316, intron 1 of 13) intron (NM_012316, intron 1 of 13) 13224 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr5-7160 chr5 3559501 3559711 + 10.7 0.000 Intergenic MIR|SINE|MIR -23512 NR_033898 285577 Hs.582442 NR_033898 ENSG00000248118 LINC01019 - long intergenic non-protein coding RNA 1019 ncRNA chr3-10955 chr3 176745038 176745248 + 10.7 0.000 Intergenic L1ME1|LINE|L1 71858 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr1-6601 chr1 38909902 38910112 + 10.7 0.000 intron (NM_001304746, intron 4 of 7) L1MD1|LINE|L1 19512 NM_001304746 54933 Hs.524626 NM_017821 ENSG00000158315 RHBDL2 RRP2 rhomboid like 2 protein-coding chr11-4207 chr11 62472606 62472816 + 10.7 0.000 intron (NM_024060, intron 5 of 5) L1MB2|LINE|L1 53678 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr11-8894 chr11 15552348 15552558 + 10.7 0.000 Intergenic L1MC3|LINE|L1 -91432 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr15-2121 chr15 70742003 70742213 + 10.7 0.000 intron (NM_018003, intron 1 of 18) intron (NM_018003, intron 1 of 18) 21450 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr19-6244 chr19 6559778 6559988 + 10.7 0.000 Intergenic AluYm1|SINE|Alu 28857 NM_003811 8744 Hs.1524 NM_003811 ENSG00000125657 TNFSF9 4-1BB-L|CD137L|TNLG5A TNF superfamily member 9 protein-coding chr5-4177 chr5 107581550 107581760 + 10.7 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 89282 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr9-5271 chr9 81456463 81456673 + 10.7 0.000 Intergenic Intergenic 232967 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr3-1150 chr3 53256031 53256241 + 10.7 0.000 promoter-TSS (NM_001064) promoter-TSS (NM_001064) -22 NR_047580 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr6-5309 chr6 143112793 143113003 + 10.7 0.000 intron (NM_001366344, intron 2 of 6) L4_B_Mam|LINE|RTE-X -13241 NM_001366358 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr2-7399 chr2 8435676 8435886 + 10.7 0.000 Intergenic Intergenic -107362 NR_152741 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr3-9734 chr3 67900619 67900829 + 10.7 0.000 intron (NR_109992, intron 6 of 6) intron (NR_109992, intron 6 of 6) -90868 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr11-4823 chr11 11093990 11094200 + 10.7 0.000 Intergenic Intergenic 235878 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr10-3579 chr10 82716382 82716592 + 10.7 0.000 intron (NR_163253, intron 3 of 10) intron (NR_163253, intron 3 of 10) -483567 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr16-2246 chr16 398423 398633 + 10.7 0.000 intron (NM_001286439, intron 2 of 5) intron (NM_001286439, intron 2 of 5) 786 NM_001286440 4833 Hs.9235 NM_005009 ENSG00000103202 NME4 NDPK-D|NM23H4|nm23-H4 NME/NM23 nucleoside diphosphate kinase 4 protein-coding chr15-3057 chr15 60782481 60782691 + 10.7 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 101017 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr3-4430 chr3 14957755 14957965 + 10.7 0.000 intron (NM_003298, intron 1 of 14) L2b|LINE|L2 -9419 NR_046251 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr11-3479 chr11 84381705 84381915 + 10.7 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) -64471 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr10-5969 chr10 123526392 123526602 + 10.7 0.000 Intergenic LTR16|LTR|ERVL -139858 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr10-2698 chr10 102367599 102367809 + 10.7 0.000 intron (NM_001199378, intron 21 of 39) intron (NM_001199378, intron 21 of 39) -26406 NM_001288724 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr3-8653 chr3 177449473 177449683 + 10.7 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 7657 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr17-3997 chr17 69228770 69228980 + 10.7 0.000 intron (NM_080282, intron 1 of 39) intron (NM_080282, intron 1 of 39) 6137 NR_130736 100133319 NR_130736 ENSG00000278873 PRO1804 - uncharacterized LOC100133319 ncRNA chr1-9958 chr1 79479048 79479258 + 10.7 0.000 Intergenic MamRTE1|LINE|RTE-BovB -472423 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr7-7579 chr7 124059879 124060089 + 10.7 0.000 Intergenic Intergenic -26917 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr7-5235 chr7 16517559 16517769 + 10.7 0.000 Intergenic Intergenic -9161 NM_001195280 100506049 Hs.278036 NM_001195280 ENSG00000205858 LRRC72 - leucine rich repeat containing 72 protein-coding chr8-1690 chr8 76507275 76507485 + 10.7 0.000 intron (NR_105006, intron 3 of 5) ERV3-16A3_I-int|LTR|ERVL 100726 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr9-863 chr9 64369198 64369408 + 10.7 0.000 promoter-TSS (NR_146419) promoter-TSS (NR_146419) -91 NR_146419 110006327 NR_146419 ANKRD20A4-ANKRD20A20P - ANKRD20A4-ANKRD20A20P readthrough ncRNA chr11-2071 chr11 78416293 78416503 + 10.7 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) 1422 NM_080491 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr15-1601 chr15 78734355 78734565 + 10.7 0.000 Intergenic Intergenic -17577 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr2-8370 chr2 110987433 110987643 + 10.7 0.000 intron (NM_001371254, intron 14 of 18) MIR|SINE|MIR 128050 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr8-1561 chr8 122244289 122244499 + 10.7 0.000 Intergenic Intergenic 324250 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr18-447 chr18 46920269 46920479 + 10.7 0.000 promoter-TSS (NM_001324060) promoter-TSS (NM_001324060) -229 NM_001324060 9063 Hs.57769 NM_004671 ENSG00000078043 PIAS2 ARIP3|DIP|MIZ1|PIASX|SIZ2|ZMIZ4 protein inhibitor of activated STAT 2 protein-coding chr6-2695 chr6 33947429 33947639 + 10.7 0.000 Intergenic L2|LINE|L2 48399 NR_106982 102466816 NR_106982 ENSG00000276824 MIR7159 hsa-mir-7159 microRNA 7159 ncRNA chr5-1948 chr5 18244149 18244359 + 10.7 0.000 Intergenic Intergenic 436980 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr7-8265 chr7 37791310 37791520 + 10.7 0.000 Intergenic SATR2|Satellite|Satellite -57182 NM_016616 51314 Hs.723454 NM_016616 ENSG00000086288 NME8 CILD6|HEL-S-99|NM23-H8|SPTRX2|TXNDC3|sptrx-2 NME/NM23 family member 8 protein-coding chr14-967 chr14 68908189 68908399 + 10.7 0.000 intron (NM_001102, intron 6 of 20) intron (NM_001102, intron 6 of 20) 71008 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr20-269 chr20 36461173 36461383 + 10.7 0.000 promoter-TSS (NM_183006) promoter-TSS (NM_183006) -190 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr13-1758 chr13 111354733 111354943 + 10.7 0.000 Intergenic L1MD2|LINE|L1 34196 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr14-4251 chr14 102904062 102904272 + 10.7 0.000 intron (NM_145725, intron 11 of 11) intron (NM_145725, intron 11 of 11) -18489 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr11-2927 chr11 67263324 67263534 + 10.7 0.000 Intergenic L2b|LINE|L2 -3044 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr11-7987 chr11 11117119 11117329 + 10.7 0.000 Intergenic Intergenic 236026 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chrX-3165 chrX 26806778 26806988 + 10.7 0.000 Intergenic AluSx|SINE|Alu 248546 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr8-2465 chr8 130396434 130396644 + 10.7 0.000 intron (NM_001247996, intron 2 of 30) intron (NM_001247996, intron 2 of 30) 47121 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr3-7017 chr3 171266837 171267047 + 10.7 0.000 intron (NM_001161563, intron 2 of 31) intron (NM_001161563, intron 2 of 31) -160183 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr11-8663 chr11 3594565 3594775 + 10.7 0.000 Intergenic LTR5A|LTR|ERVK -22683 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA chrX-1852 chrX 111649618 111649828 + 10.7 0.000 Intergenic L1M1|LINE|L1 -31395 NR_033125 79868 Hs.443061 NM_018466 ENSG00000101901 ALG13 CDG1S|CXorf45|EIEE36|GLT28D1|MDS031|TDRD13|YGL047W ALG13 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr3-2461 chr3 101780685 101780895 + 10.7 0.000 intron (NM_001348992, intron 2 of 8) L2a|LINE|L2 1126 NM_001348990 91775 Hs.595933 NM_145037 ENSG00000144815 NXPE3 FAM55C|MST115|MSTP115 neurexophilin and PC-esterase domain family member 3 protein-coding chr9-1815 chr9 104830024 104830234 + 10.7 0.000 intron (NM_005502, intron 14 of 49) intron (NM_005502, intron 14 of 49) 66000 NR_130760 55335 Hs.429294 NM_018376 ENSG00000165028 NIPSNAP3B FP944|NIPSNAP3|SNAP1 nipsnap homolog 3B protein-coding chr14-1181 chr14 59791548 59791758 + 10.7 0.000 intron (NM_021136, intron 1 of 8) intron (NM_021136, intron 1 of 8) 79123 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr5-2695 chr5 75602215 75602425 + 10.7 0.000 non-coding (NR_144315, exon 14 of 14) non-coding (NR_144315, exon 14 of 14) -9156 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr2-13922 chr2 183074662 183074872 + 10.7 0.000 Intergenic MIRb|SINE|MIR -3980 NM_001142314 142679 Hs.132237 NM_080876 ENSG00000162999 DUSP19 DUSP17|LMWDSP3|SKRP1|TS-DSP1 dual specificity phosphatase 19 protein-coding chr19-1155 chr19 58369031 58369241 + 10.7 0.000 non-coding (NR_049780, exon 3 of 3) non-coding (NR_049780, exon 3 of 3) -6385 NM_001207009 162968 Hs.447840 NM_198458 ENSG00000174586 ZNF497 - zinc finger protein 497 protein-coding chr6-4662 chr6 52538880 52539090 + 10.7 0.000 intron (NM_012288, intron 1 of 10) Tigger17a|DNA|TcMar-Tigger 38075 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr15-1040 chr15 101294741 101294951 + 10.7 0.000 intron (NR_135508, intron 1 of 7) CpG 402 NM_003090 6627 Hs.528763 NM_003090 ENSG00000131876 SNRPA1 Lea1|U2A' small nuclear ribonucleoprotein polypeptide A' protein-coding chr18-3188 chr18 45171588 45171798 + 10.7 0.000 intron (NM_001371319, intron 1 of 23) intron (NM_001371319, intron 1 of 23) 3730 NM_001371319 chr10-3455 chr10 52884337 52884547 + 10.7 0.000 Intergenic Intergenic -112742 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr10-2302 chr10 31929295 31929505 + 10.7 0.000 promoter-TSS (NM_001270697) promoter-TSS (NM_001270697) -524 NM_001270695 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr17-4903 chr17 73545595 73545805 + 10.7 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 32017 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr7-1006 chr7 519706 519916 + 10.7 0.000 promoter-TSS (NM_033023) promoter-TSS (NM_033023) 33 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr2-1500 chr2 10278030 10278240 + 10.7 0.000 Intergenic Intergenic -24769 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr18-1836 chr18 22807615 22807825 + 10.7 0.000 Intergenic Intergenic -20883 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr13-2572 chr13 68829231 68829441 + 10.7 0.000 Intergenic Intergenic 55989 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr2-5595 chr2 176887026 176887236 + 10.7 0.000 Intergenic Intergenic 249377 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr11-3124 chr11 38819139 38819349 + 10.7 0.000 Intergenic L2a|LINE|L2 170386 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr2-9558 chr2 240156561 240156771 + 10.7 0.000 Intergenic Intergenic -16008 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr6-1957 chr6 130708430 130708640 + 10.7 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -118870 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr20-895 chr20 38180854 38181064 + 10.7 0.000 Intergenic Intergenic -14451 NM_001323316 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr9-5247 chr9 78174685 78174895 + 10.7 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -61285 NM_001330694 84131 Hs.187621 NM_032171 ENSG00000148019 CEP78 C9orf81|CRDHL|IP63 centrosomal protein 78 protein-coding chr2-7409 chr2 9175236 9175446 + 10.7 0.000 Intergenic MIRb|SINE|MIR -31424 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr18-3412 chr18 62849094 62849304 + 10.7 0.000 intron (NM_194449, intron 3 of 16) Tigger14a|DNA|TcMar-Tigger 133658 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr14-986 chr14 77486567 77486777 + 10.7 0.000 intron (NM_199296, intron 1 of 6) intron (NM_199296, intron 1 of 6) 12144 NM_182509 145501 Hs.29742 NM_182509 ENSG00000100593 ISM2 TAIL1|THSD3 isthmin 2 protein-coding chr6-2051 chr6 90025888 90026098 + 10.7 0.000 intron (NM_021813, intron 5 of 8) intron (NM_021813, intron 5 of 8) 131524 NM_032602 84694 Hs.334499 NM_032602 ENSG00000135355 GJA10 CX62 gap junction protein alpha 10 protein-coding chr13-716 chr13 72291332 72291542 + 10.7 0.000 Intergenic Intergenic -424233 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr2-13618 chr2 159188761 159188971 + 10.7 0.000 intron (NM_001350065, intron 17 of 27) intron (NM_001350065, intron 17 of 27) 2031 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr10-2327 chr10 62941326 62941536 + 10.7 0.000 Intergenic L4_C_Mam|LINE|RTE-X -122264 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chr10-4285 chr10 11213255 11213465 + 10.7 0.000 intron (NM_001326339, intron 2 of 11) intron (NM_001326339, intron 2 of 11) 48330 NM_001025076 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr1-8241 chr1 31228140 31228350 + 10.7 0.000 intron (NM_024522, intron 1 of 6) intron (NM_024522, intron 1 of 6) 11642 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr14-2016 chr14 58918125 58918335 + 10.7 0.000 intron (NR_110547, intron 3 of 5) intron (NR_110547, intron 3 of 5) 89942 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr19-2164 chr19 11165042 11165252 + 10.7 0.000 3' UTR (NM_001329451, exon 12 of 12) 3' UTR (NM_001329451, exon 12 of 12) -9335 NM_001317031 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr11-5985 chr11 19962785 19962995 + 10.7 0.000 intron (NM_182964, intron 10 of 37) intron (NM_182964, intron 10 of 37) -59666 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr12-1951 chr12 110742809 110743019 + 10.7 0.000 promoter-TSS (NM_001244974) promoter-TSS (NM_001244974) -23 NM_001244974 5501 Hs.79081 NM_002710 ENSG00000186298 PPP1CC PP-1G|PP1C|PPP1G protein phosphatase 1 catalytic subunit gamma protein-coding chr6-3053 chr6 64331002 64331212 + 10.7 0.000 intron (NM_001292009, intron 29 of 43) HERV1_I-int|LTR|ERV1 524271 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr9-1811 chr9 95037996 95038206 + 10.7 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -27249 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr7-2799 chr7 83677152 83677362 + 10.7 0.000 Intergenic Intergenic -28118 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr7-3686 chr7 48095025 48095235 + 10.7 0.000 intron (NM_001287430, intron 3 of 5) intron (NM_001287430, intron 3 of 5) 5865 NM_003364 7378 Hs.488240 NM_003364 ENSG00000183696 UPP1 UDRPASE|UP|UPASE|UPP uridine phosphorylase 1 protein-coding chr1-6164 chr1 184443578 184443788 + 10.7 0.000 intron (NM_030806, intron 1 of 5) intron (NM_030806, intron 1 of 5) 56654 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr3-6344 chr3 82023603 82023813 + 10.7 0.000 intron (NR_147146, intron 1 of 8) intron (NR_147146, intron 1 of 8) 37566 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr3-5022 chr3 28570837 28571047 + 10.7 0.000 Intergenic Intergenic -4336 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr7-3614 chr7 33500578 33500788 + 10.7 0.000 intron (NM_001348037, intron 18 of 20) intron (NM_001348037, intron 18 of 20) 371119 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr8-4231 chr8 88395503 88395713 + 10.7 0.000 Intergenic Intergenic -68125 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr7-8251 chr7 35734097 35734307 + 10.7 0.000 Intergenic L2c|LINE|L2 17765 NR_108082 100506725 Hs.304253 NR_108082 ENSG00000227544 LOC100506725 - uncharacterized LOC100506725 ncRNA chr6-4362 chr6 20377878 20378088 + 10.7 0.000 Intergenic Intergenic -23896 NM_001949 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chr11-2775 chr11 68445711 68445921 + 10.7 0.000 intron (NM_002335, intron 21 of 22) intron (NM_002335, intron 21 of 22) -14936 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr6-4734 chr6 66739301 66739511 + 10.7 0.000 Intergenic Intergenic 951527 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr8-5626 chr8 100695241 100695451 + 10.7 0.000 Intergenic Intergenic 7678 NR_106992 102466854 NR_106992 ENSG00000284570 MIR7705 hsa-mir-7705 microRNA 7705 ncRNA chr10-4206 chr10 112137389 112137599 + 10.7 0.000 Intergenic Intergenic 46271 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr13-2194 chr13 20953709 20953919 + 10.7 0.000 Intergenic Intergenic -4386 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr22-3129 chr22 21102952 21103162 + 10.7 0.000 promoter-TSS (NR_037566) promoter-TSS (NR_037566) 41 NR_037566 400892 Hs.745077 NM_207474 BCRP2 BCR-2|BCR2|BCRL2 BCR pseudogene 2 pseudo chr2-6920 chr2 107117286 107117496 + 10.7 0.000 Intergenic Intergenic -230282 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr3-3695 chr3 162165547 162165757 + 10.7 0.000 Intergenic Intergenic 668844 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr19-2309 chr19 12721179 12721389 + 10.7 0.000 intron (NM_001136195, intron 2 of 25) CpG 975 NM_013433 30000 Hs.416049 NM_013433 ENSG00000105576 TNPO2 IPO3|KPNB2B|TRN2 transportin 2 protein-coding chr1-12859 chr1 102665660 102665870 + 10.7 0.000 Intergenic Intergenic 442731 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr8-6689 chr8 82354420 82354630 + 10.7 0.000 Intergenic Intergenic -512239 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr7-3819 chr7 97100736 97100946 + 10.7 0.000 Intergenic L1PB1|LINE|L1 -15752 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr7-7971 chr7 13293571 13293781 + 10.7 0.000 Intergenic Intergenic 606043 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr10-7564 chr10 16927665 16927875 + 10.7 0.000 intron (NM_001081, intron 41 of 66) intron (NM_001081, intron 41 of 66) -110316 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr22-1696 chr22 50016996 50017206 + 10.7 0.000 Intergenic Intergenic -4336 NM_001371417 chr1-5101 chr1 117284628 117284838 + 10.7 0.000 Intergenic Intergenic -10733 NR_126408 104355292 Hs.576446 NR_126408 ENSG00000235202 LINC01525 lnc-MAN1A2-1 long intergenic non-protein coding RNA 1525 ncRNA chr2-3921 chr2 54772254 54772464 + 10.7 0.000 intron (NM_001039753, intron 1 of 40) intron (NM_001039753, intron 1 of 40) 47347 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr12-4211 chr12 103855534 103855744 + 10.7 0.000 intron (NR_027249, intron 14 of 15) intron (NR_027249, intron 14 of 15) -14405 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr17-1058 chr17 42107767 42107977 + 10.7 0.000 intron (NM_024119, intron 7 of 13) CpG-11145 4842 NM_024119 79132 Hs.55918 NM_024119 ENSG00000108771 DHX58 D11LGP2|D11lgp2e|LGP2|RLR-3 DExH-box helicase 58 protein-coding chr7-5467 chr7 41148692 41148902 + 10.7 0.000 Intergenic Intergenic 47193 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr3-3773 chr3 11749560 11749770 + 10.7 0.000 Intergenic Intergenic -29126 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr3-2560 chr3 74531766 74531976 + 10.7 0.000 Intergenic L1MB7|LINE|L1 -10731 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chrX-2547 chrX 100091130 100091340 + 10.7 0.000 Intergenic L1PA14|LINE|L1 319038 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr13-1052 chr13 112740637 112740847 + 10.7 0.000 intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 13989 NR_046661 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr13-1025 chr13 50025521 50025731 + 10.7 0.000 intron (NR_152566, intron 10 of 13) intron (NR_152566, intron 10 of 13) 10182 NM_199464 283518 Hs.660161 NM_173605 ENSG00000198553 KCNRG DLTET potassium channel regulator protein-coding chr5-4101 chr5 72473624 72473834 + 10.7 0.000 intron (NM_152625, intron 1 of 4) intron (NM_152625, intron 1 of 4) 33681 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr17-3162 chr17 65307178 65307388 + 10.7 0.000 Intergenic Intergenic -150258 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr21-604 chr21 19411967 19412177 + 10.7 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 487683 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr9-8699 chr9 131090806 131091016 + 10.7 0.000 intron (NM_006059, intron 27 of 27) AluSx1|SINE|Alu -5565 NR_033701 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr9-4979 chr9 19343333 19343543 + 10.7 0.000 intron (NR_073201, intron 21 of 31) intron (NR_073201, intron 21 of 31) 36798 NM_001010 6194 Hs.408073 NM_001010 ENSG00000137154 RPS6 S6 ribosomal protein S6 protein-coding chr2-13131 chr2 117610301 117610511 + 10.7 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -204285 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr17-2476 chr17 65036172 65036382 + 10.7 0.000 intron (NM_006572, intron 2 of 3) intron (NM_006572, intron 2 of 3) 19497 NM_001282425 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr5-3813 chr5 95073470 95073680 + 10.7 0.000 intron (NM_024717, intron 1 of 22) intron (NM_024717, intron 1 of 22) 8291 NM_001002796 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr22-1927 chr22 46381753 46381963 + 10.7 0.000 exon (NM_014246, exon 21 of 35) exon (NM_014246, exon 21 of 35) 46144 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr5-3326 chr5 132182539 132182749 + 10.7 0.000 Intergenic L2a|LINE|L2 -2232 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA chrX-2834 chrX 137377515 137377725 + 10.7 0.000 Intergenic L3|LINE|CR1 -188507 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr11-1733 chr11 107591180 107591390 + 10.7 0.000 5' UTR (NM_001130037, exon 1 of 11) 5' UTR (NM_001130037, exon 1 of 11) 138 NM_018712 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr9-4354 chr9 130377794 130378004 + 10.7 0.000 intron (NM_001291815, intron 53 of 97) intron (NM_001291815, intron 53 of 97) -66808 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr4-2638 chr4 158775280 158775490 + 10.7 0.000 intron (NM_001346043, intron 1 of 15) intron (NM_001346043, intron 1 of 15) 6359 NM_001346043 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr8-1534 chr8 96584601 96584811 + 10.7 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -60536 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr2-2586 chr2 237745074 237745284 + 10.7 0.000 intron (NM_001137550, intron 11 of 23) intron (NM_001137550, intron 11 of 23) 52974 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr5-3641 chr5 141084515 141084725 + 10.7 0.000 Intergenic Intergenic -6589 NR_105056 101926905 Hs.570900 NR_105056 LOC101926905 - uncharacterized LOC101926905 ncRNA chr11-2100 chr11 113190401 113190611 + 10.7 0.000 intron (NM_181351, intron 1 of 18) intron (NM_181351, intron 1 of 18) 83395 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr2-6154 chr2 236776720 236776930 + 10.7 0.000 Intergenic Intergenic 207000 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr10-3356 chr10 14873446 14873656 + 10.7 0.000 Intergenic L2a|LINE|L2 -5232 NR_034181 79723 Hs.554883 NM_024670 ENSG00000152455 SUV39H2 KMT1B suppressor of variegation 3-9 homolog 2 protein-coding chr11-4031 chr11 9778647 9778857 + 10.7 0.000 TTS (NM_030962) TTS (NM_030962) -19219 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chr6-3044 chr6 57672304 57672514 + 10.7 0.000 Intergenic L2c|LINE|L2 264520 NR_133000 375513 Hs.561539 NM_206908 GUSBP4 C6orf216|GUSBL2|SMA3-L|SMAC3L GUSB pseudogene 4 pseudo chr7-2812 chr7 93279534 93279744 + 10.7 0.000 intron (NM_001257998, intron 13 of 28) intron (NM_001257998, intron 13 of 28) 47273 NM_017667 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr13-3523 chr13 22851675 22851885 + 10.7 0.000 Intergenic Intergenic 46401 NR_033774 646201 Hs.729338 NR_033774 BASP1P1 - BASP1 pseudogene 1 pseudo chr17-2903 chr17 42002800 42003010 + 10.7 0.000 intron (NM_003315, intron 1 of 13) intron (NM_003315, intron 1 of 13) 14260 NM_001144766 7266 Hs.500156 NM_003315 ENSG00000168259 DNAJC7 DJ11|DJC7|TPR2|TTC2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding chr16-6060 chr16 11109596 11109806 + 10.7 0.000 intron (NM_015226, intron 18 of 22) intron (NM_015226, intron 18 of 22) 146481 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr1-3466 chr1 44390192 44390402 + 10.7 0.000 Intergenic Intergenic -14863 NM_001319956 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr3-8736 chr3 196463681 196463891 + 10.7 0.000 Intergenic Intergenic -31359 NM_015562 26043 Hs.518524 NM_015562 ENSG00000163960 UBXN7 UBXD7 UBX domain protein 7 protein-coding chr18-2106 chr18 51154430 51154640 + 10.7 0.000 Intergenic Intergenic 43146 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr19-3440 chr19 19203175 19203385 + 10.7 0.000 5' UTR (NM_001300945, exon 1 of 6) 5' UTR (NM_001300945, exon 1 of 6) 134 NM_001300945 126382 Hs.708153 NM_176880 ENSG00000184162 NR2C2AP TRA16 nuclear receptor 2C2 associated protein protein-coding chr3-3396 chr3 60294058 60294268 + 10.7 0.000 intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) -213254 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr1-8386 chr1 75209921 75210131 + 10.7 0.000 intron (NM_001320283, intron 21 of 21) intron (NM_001320283, intron 21 of 21) 75638 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr1-7513 chr1 154625059 154625269 + 10.7 0.000 intron (NM_001365045, intron 1 of 14) intron (NM_001365045, intron 1 of 14) 2807 NM_001025107 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr13-1803 chr13 32904475 32904685 + 10.7 0.000 intron (NR_047020, intron 3 of 4) MER65D|LTR|ERV1 7072 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr15-1167 chr15 87736558 87736768 + 10.7 0.000 Intergenic Intergenic 159734 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr1-7851 chr1 85342573 85342783 + 10.7 0.000 intron (NM_001134445, intron 5 of 6) intron (NM_001134445, intron 5 of 6) 61828 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr4-5837 chr4 105489960 105490170 + 10.7 0.000 Intergenic Intergenic -15995 NM_006903 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chr17-6009 chr17 78176452 78176662 + 10.7 0.000 intron (NM_003258, intron 4 of 6) intron (NM_003258, intron 4 of 6) 8012 NM_001363778 9144 Hs.464210 NM_004710 ENSG00000108639 SYNGR2 - synaptogyrin 2 protein-coding chr7-2824 chr7 99563787 99563997 + 10.7 0.000 exon (NM_001085366, exon 3 of 3) exon (NM_001085366, exon 3 of 3) 5058 NM_001363333 79027 Hs.599798 NM_024061 ENSG00000197343 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding chr11-3892 chr11 106503991 106504201 + 10.7 0.000 Intergenic Intergenic 252689 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr1-3547 chr1 226815056 226815266 + 10.7 0.000 Intergenic Intergenic -55411 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chrX-1633 chrX 122298467 122298677 + 10.7 0.000 Intergenic L1PA7|LINE|L1 -885671 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr7-2523 chr7 46485501 46485711 + 10.7 0.000 Intergenic Intergenic 211516 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr16-3589 chr16 72820959 72821169 + 10.7 0.000 intron (NM_001164766, intron 4 of 8) intron (NM_001164766, intron 4 of 8) -156094 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr1-6802 chr1 88513386 88513596 + 10.7 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -170653 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr3-2756 chr3 141360988 141361198 + 10.7 0.000 intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) -25332 NM_001350099 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr12-932 chr12 132084933 132085143 + 10.7 0.000 intron (NR_003290, intron 1 of 9) CpG 755 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400P1 EP400NL EP400 pseudogene 1 pseudo chr4-1561 chr4 1357789 1357999 + 10.7 0.000 intron (NM_020894, intron 7 of 13) intron (NM_020894, intron 7 of 13) 10338 NM_001317935 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chr2-9443 chr2 233820108 233820318 + 10.7 0.000 intron (NM_001367507, intron 31 of 41) intron (NM_001367507, intron 31 of 41) 34322 NM_018410 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding chr2-7334 chr2 241531024 241531234 + 10.7 0.000 Intergenic L1MD2|LINE|L1 -21557 NM_001282305 10494 Hs.516807 NM_006374 ENSG00000115694 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding chr3-3072 chr3 131072126 131072336 + 10.7 0.000 intron (NM_001353038, intron 4 of 18) MLT1L|LTR|ERVL-MaLR 44503 NM_001321223 79858 Hs.657336 NM_024800 ENSG00000114670 NEK11 - NIMA related kinase 11 protein-coding chr15-1725 chr15 25378605 25378815 + 10.7 0.000 intron (NM_001354546, intron 1 of 9) intron (NM_001354546, intron 1 of 9) 59519 NM_001354505 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr17-4440 chr17 44636665 44636875 + 10.7 0.000 Intergenic Intergenic 13579 NR_110661 101927017 Hs.560554 NR_110661 ENSG00000266979 LINC01180 - long intergenic non-protein coding RNA 1180 ncRNA chr14-2626 chr14 62866308 62866518 + 10.7 0.000 intron (NM_139318, intron 7 of 10) intron (NM_139318, intron 7 of 10) 179045 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr5-2491 chr5 149418048 149418258 + 10.7 0.000 intron (NR_105060, intron 1 of 4) intron (NR_105060, intron 1 of 4) -10765 NR_029684 406935 NR_029684 ENSG00000284182 MIR143 MIRN143|mir-143 microRNA 143 ncRNA chr8-3889 chr8 38397574 38397784 + 10.7 0.000 intron (NM_001199660, intron 4 of 10) L2b|LINE|L2 10548 NM_001199660 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 SLC55A2 leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr9-8068 chr9 98011497 98011707 + 10.7 0.000 intron (NM_006401, intron 5 of 6) intron (NM_006401, intron 5 of 6) 28261 NM_006401 10541 Hs.730654 NM_006401 ENSG00000136938 ANP32B APRIL|PHAPI2|SSP29 acidic nuclear phosphoprotein 32 family member B protein-coding chr10-2891 chr10 107974548 107974758 + 10.7 0.000 intron (NR_125760, intron 4 of 4) THE1A-int|LTR|ERVL-MaLR 94640 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr5-1310 chr5 66596373 66596583 + 10.7 0.000 promoter-TSS (NM_198828) promoter-TSS (NM_198828) 85 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr11-3732 chr11 27012278 27012488 + 10.7 0.000 Intergenic MamRep605|LTR?|LTR? 18271 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr2-3049 chr2 85750522 85750732 + 10.7 0.000 Intergenic Intergenic -3364 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr10-2072 chr10 102385176 102385386 + 10.7 0.000 Intergenic Intergenic -8829 NM_001288724 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr4-2579 chr4 100421078 100421288 + 10.7 0.000 intron (NM_001159694, intron 7 of 10) intron (NM_001159694, intron 7 of 10) -25936 NR_135619 107399301 NR_135619 SNORA101A - small nucleolar RNA, H/ACA box 101A snoRNA chr17-1823 chr17 3720363 3720573 + 10.7 0.000 intron (NM_002208, intron 28 of 30) intron (NM_002208, intron 28 of 30) -3435 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr10-3192 chr10 91799247 91799457 + 10.7 0.000 intron (NM_025235, intron 1 of 26) UCON132b|DNA|hAT-Tip100 926 NM_025235 80351 Hs.329327 NM_025235 ENSG00000107854 TNKS2 ARTD6|PARP-5b|PARP-5c|PARP5B|PARP5C|TANK2|TNKL|pART6 tankyrase 2 protein-coding chr8-3728 chr8 21765854 21766064 + 10.7 0.000 intron (NM_001165039, intron 1 of 6) L2a|LINE|L2 22916 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr2-6908 chr2 102114362 102114572 + 10.7 0.000 intron (NM_001320980, intron 1 of 11) intron (NM_001320980, intron 1 of 11) 9863 NM_001320986 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr15-3150 chr15 67330888 67331098 + 10.7 0.000 intron (NM_001322475, intron 3 of 17) HAL1b|LINE|L1 -75795 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding chr1-8744 chr1 244674534 244674744 + 10.7 0.000 intron (NM_016076, intron 1 of 4) L1MB8|LINE|L1 21513 NM_001297746 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr10-7166 chr10 103566028 103566238 + 10.7 0.000 intron (NM_004210, intron 1 of 5) AluJr|SINE|Alu -48691 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr6-3125 chr6 105882515 105882725 + 10.7 0.000 Intergenic Intergenic -203716 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr18-781 chr18 36211035 36211245 + 10.7 0.000 intron (NM_017947, intron 6 of 14) intron (NM_017947, intron 6 of 14) 23643 NM_017947 55034 Hs.405028 NM_017947 ENSG00000075643 MOCOS HMCS|MCS|MOS molybdenum cofactor sulfurase protein-coding chr12-2242 chr12 65997783 65997993 + 10.7 0.000 Intergenic L2a|LINE|L2 25838 NR_106722 102464827 NR_106722 ENSG00000276878 MIR6074 hsa-mir-6074 microRNA 6074 ncRNA chr1-4236 chr1 201050643 201050853 + 10.7 0.000 intron (NM_000069, intron 33 of 43) intron (NM_000069, intron 33 of 43) -27034 NM_001252100 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr1-3969 chr1 152398948 152399158 + 10.7 0.000 Intergenic Intergenic 15210 NM_016190 49860 Hs.242057 NM_016190 ENSG00000143536 CRNN C1orf10|DRC1|PDRC1|SEP53 cornulin protein-coding chr2-2232 chr2 189798636 189798846 + 10.7 0.000 intron (NM_001289408, intron 3 of 11) intron (NM_001289408, intron 3 of 11) 14291 NM_001321045 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr21-1009 chr21 16723407 16723617 + 10.7 0.000 Intergenic Intergenic 133275 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr14-1657 chr14 38053775 38053985 + 10.7 0.000 Intergenic Intergenic -151756 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr16-4898 chr16 88991510 88991720 + 10.7 0.000 Intergenic AluSx|SINE|Alu -14408 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr4-3692 chr4 54296763 54296973 + 10.7 0.000 3' UTR (NM_001347828, exon 24 of 24) 3' UTR (NM_001347828, exon 24 of 24) -36024 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr5-8858 chr5 152906804 152907014 + 10.7 0.000 intron (NR_109877, intron 2 of 4) intron (NR_109877, intron 2 of 4) 65440 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr17-3680 chr17 13140801 13141011 + 10.7 0.000 Intergenic Intergenic -122842 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr1-3737 chr1 236894076 236894286 + 10.7 0.000 intron (NM_000254, intron 29 of 32) L2a|LINE|L2 98889 NM_001291940 4548 Hs.498187 NM_000254 ENSG00000116984 MTR HMAG|MS|cblG 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding chr2-7875 chr2 53040617 53040827 + 10.7 0.000 Intergenic L1MC3|LINE|L1 -338107 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr18-1890 chr18 29083549 29083759 + 10.7 0.000 Intergenic Intergenic -906524 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr1-3441 chr1 21552859 21553069 + 10.7 0.000 intron (NM_001369803, intron 1 of 11) intron (NM_001369803, intron 1 of 11) 1694 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr17-2589 chr17 76150550 76150760 + 10.7 0.000 intron (NR_040017, intron 6 of 7) intron (NR_040017, intron 6 of 7) -9410 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr21-773 chr21 44512310 44512520 + 10.7 0.000 intron (NR_103707, intron 6 of 6) intron (NR_103707, intron 6 of 6) -4800 NR_026547 114043 Hs.592163 NM_153204 TSPEAR-AS2 C21orf90 TSPEAR antisense RNA 2 ncRNA chr3-6166 chr3 58246619 58246829 + 10.7 0.000 intron (NM_020676, intron 1 of 8) intron (NM_020676, intron 1 of 8) 8932 NM_001320126 57406 Hs.476454 NM_020676 ENSG00000163686 ABHD6 - abhydrolase domain containing 6 protein-coding chr19-2889 chr19 44808008 44808218 + 10.7 0.000 promoter-TSS (NM_005581) promoter-TSS (NM_005581) -946 NM_005581 4059 Hs.625725 NM_005581 ENSG00000187244 BCAM AU|CD239|LU|MSK19 basal cell adhesion molecule (Lutheran blood group) protein-coding chr16-1036 chr16 48610012 48610222 + 10.7 0.000 promoter-TSS (NM_153029) promoter-TSS (NM_153029) 63 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chrX-1320 chrX 130966241 130966451 + 10.7 0.000 Intergenic Intergenic -63029 NM_182314 10495 Hs.171458 NM_006375 ENSG00000165675 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding chr3-4332 chr3 177904927 177905137 + 10.7 0.000 Intergenic MIRb|SINE|MIR 88167 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr10-4328 chr10 26222925 26223135 + 10.7 0.000 intron (NM_000818, intron 4 of 16) intron (NM_000818, intron 4 of 16) 6256 NM_001134366 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr8-1875 chr8 22179102 22179312 + 10.7 0.000 intron (NR_033404, intron 6 of 15) intron (NR_033404, intron 6 of 15) 13835 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr11-3608 chr11 67734738 67734948 + 10.7 0.000 Intergenic SATR2|Satellite|Satellite -53619 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr9-3037 chr9 129328940 129329150 + 10.7 0.000 Intergenic Intergenic -7878 NR_120686 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr2-3463 chr2 145158164 145158374 + 10.7 0.000 Intergenic Intergenic 490302 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr5-3087 chr5 38732126 38732336 + 10.7 0.000 intron (NR_109951, intron 3 of 3) intron (NR_109951, intron 3 of 3) -11958 NR_104631 101926904 Hs.634191 NR_104631 ENSG00000249740 LINC01265 - long intergenic non-protein coding RNA 1265 ncRNA chr3-4776 chr3 112496000 112496210 + 10.7 0.000 intron (NM_001085357, intron 1 of 3) LTR84b|LTR|ERVL 3367 NM_181780 151888 Hs.445162 NM_181780 ENSG00000186265 BTLA BTLA1|CD272 B and T lymphocyte associated protein-coding chr15-3192 chr15 70742946 70743156 + 10.7 0.000 intron (NM_018003, intron 1 of 18) MLT1E2|LTR|ERVL-MaLR 20507 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr19-2459 chr19 1421784 1421994 + 10.7 0.000 intron (NM_001352035, intron 5 of 10) intron (NM_001352035, intron 5 of 10) 14303 NM_001352035 26528 Hs.222510 NM_018959 ENSG00000071626 DAZAP1 - DAZ associated protein 1 protein-coding chr13-1604 chr13 45292221 45292431 + 10.7 0.000 Intergenic Intergenic 44121 NR_145985 109616966 NR_145726 ENSG00000253051 SNORA31B - small nucleolar RNA, H/ACA box 31B snoRNA chr3-3424 chr3 120474099 120474309 + 10.7 0.000 Intergenic Intergenic -23212 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr4-2034 chr4 4137534 4137744 + 10.7 0.000 Intergenic SATR1|Satellite|Satellite 89255 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr11-4346 chr11 73037233 73037443 + 10.7 0.000 intron (NM_014824, intron 3 of 19) L1MC1|LINE|L1 104980 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr5-6261 chr5 96720790 96721000 + 10.7 0.000 intron (NM_001042446, intron 1 of 26) intron (NM_001042446, intron 1 of 26) 18235 NM_001330633 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr2-5684 chr2 202756269 202756479 + 10.7 0.000 intron (NM_173511, intron 5 of 7) intron (NM_173511, intron 5 of 7) 72860 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr5-2502 chr5 150847124 150847334 + 10.7 0.000 intron (NM_001346557, intron 1 of 3) intron (NM_001346557, intron 1 of 3) 706 NM_001145805 345611 Hs.519680 NM_001145805 ENSG00000237693 IRGM IFI1|IRGM1|LRG-47|LRG47 immunity related GTPase M protein-coding chr10-1429 chr10 21385687 21385897 + 10.7 0.000 Intergenic Intergenic -12842 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr15-2185 chr15 86571636 86571846 + 10.7 0.000 intron (NM_152336, intron 22 of 24) MER52D|LTR|ERV1 -254773 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr2-7992 chr2 66537162 66537372 + 10.7 0.000 intron (NM_002398, intron 8 of 12) intron (NM_002398, intron 8 of 12) -36763 NR_110156 100507073 Hs.667940 NR_110156 ENSG00000232046 LINC01798 - long intergenic non-protein coding RNA 1798 ncRNA chr4-3407 chr4 55346169 55346379 + 10.7 0.000 promoter-TSS (NM_024592) promoter-TSS (NM_024592) 32 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding chr10-8376 chr10 80914857 80915067 + 10.7 0.000 Intergenic LTR81|LTR|Gypsy 265165 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr1-9927 chr1 75996363 75996573 + 10.7 0.000 Intergenic Intergenic -14856 NR_125939 101927342 Hs.216363 NR_125939 LOC101927342 - uncharacterized LOC101927342 ncRNA chr2-6383 chr2 113212661 113212871 + 10.7 0.000 Intergenic Intergenic -22761 NR_047570 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr11-7750 chr11 76637925 76638135 + 10.7 0.000 Intergenic Intergenic 31908 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr9-8560 chr9 127316940 127317150 + 10.7 0.000 intron (NR_104591, intron 4 of 26) intron (NR_104591, intron 4 of 26) 52271 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr7-3528 chr7 6510245 6510455 + 10.7 0.000 exon (NM_001145118, exon 11 of 22) exon (NM_001145118, exon 11 of 22) -26198 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr12-3285 chr12 72683730 72683940 + 10.7 0.000 Intergenic Intergenic -410326 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr1-6768 chr1 77272326 77272536 + 10.7 0.000 Intergenic Intergenic -9588 NM_174858 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr1-5453 chr1 51516829 51517039 + 10.7 0.000 intron (NM_001981, intron 1 of 24) intron (NM_001981, intron 1 of 24) 2332 NM_001981 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding chr3-7002 chr3 170485278 170485488 + 10.7 0.000 intron (NM_020949, intron 5 of 7) intron (NM_020949, intron 5 of 7) 18098 NR_135555 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr3-2984 chr3 86837951 86838161 + 10.7 0.000 Intergenic Intergenic 153093 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr2-14839 chr2 241739937 241740147 + 10.7 0.000 intron (NR_109778, intron 2 of 7) AluJb|SINE|Alu 5412 NR_109778 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr11-1785 chr11 67111299 67111509 + 10.7 0.000 TTS (NR_160735) TTS (NR_160735) 6944 NR_160735 107984341 NR_160735 LOC107984341 - uncharacterized LOC107984341 ncRNA chr6-3416 chr6 108123415 108123625 + 10.7 0.000 promoter-TSS (NR_145458) promoter-TSS (NR_145458) -113 NR_145458 100287366 Hs.221513 NR_145458 ENSG00000225174 OSTM1-AS1 - OSTM1 antisense RNA 1 ncRNA chr1-9878 chr1 67059382 67059592 + 10.7 0.000 Intergenic L2b|LINE|L2 -5339 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr6-2305 chr6 107458680 107458890 + 10.7 0.000 intron (NM_020381, intron 1 of 7) intron (NM_020381, intron 1 of 7) 779 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr19-1574 chr19 3820293 3820503 + 10.7 0.000 intron (NM_015174, intron 10 of 18) intron (NM_015174, intron 10 of 18) -18599 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr7-2274 chr7 6272728 6272938 + 10.7 0.000 promoter-TSS (NM_004227) promoter-TSS (NM_004227) -209 NM_001367581 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr2-4726 chr2 239326969 239327179 + 10.7 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) 21612 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr1-5311 chr1 221149235 221149445 + 10.7 0.000 Intergenic Intergenic 186956 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr2-2488 chr2 142863623 142863833 + 10.7 0.000 Intergenic MamRTE1|LINE|RTE-BovB -13936 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr6-7468 chr6 56798179 56798389 + 10.7 0.000 intron (NM_001144770, intron 2 of 94) Tigger1|DNA|TcMar-Tigger 45381 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr9-4316 chr9 124820410 124820620 + 10.7 0.000 Intergenic Intergenic 19641 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr1-16480 chr1 228946023 228946233 + 10.7 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 210649 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr16-2845 chr16 84864635 84864845 + 10.7 0.000 intron (NM_031476, intron 6 of 14) L2c|LINE|L2 44755 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr4-4682 chr4 85748075 85748285 + 10.7 0.000 intron (NM_001025616, intron 3 of 9) intron (NM_001025616, intron 3 of 9) 25712 NR_039656 100616349 NR_039656 ENSG00000266421 MIR4451 mir-4451 microRNA 4451 ncRNA chr8-859 chr8 38785048 38785258 + 10.7 0.000 intron (NM_001352804, intron 1 of 10) G-rich|Low_complexity|Low_complexity -2083 NM_001352779 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr11-1839 chr11 73526916 73527126 + 10.7 0.000 intron (NM_001286051, intron 1 of 5) intron (NM_001286051, intron 1 of 5) 71091 NM_015159 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr5-6559 chr5 15463384 15463594 + 10.7 0.000 Intergenic L1M3f|LINE|L1 -36691 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr14-2296 chr14 68409465 68409675 + 10.7 0.000 intron (NM_133509, intron 8 of 10) intron (NM_133509, intron 8 of 10) 219217 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr15-952 chr15 38401207 38401417 + 10.7 0.000 Intergenic Intergenic -52815 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr9-2664 chr9 36908214 36908424 + 10.7 0.000 intron (NR_103999, intron 6 of 8) L2c|LINE|L2 -14788 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr10-4258 chr10 88255 88465 + 10.7 0.000 Intergenic Intergenic -39122 NM_177987 347688 Hs.532659 NM_177987 ENSG00000261456 TUBB8 OOMD|OOMD2|bA631M21.2 tubulin beta 8 class VIII protein-coding chr12-2250 chr12 79474507 79474717 + 10.7 0.000 Intergenic SATR2|Satellite|Satellite 55355 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr9-4610 chr9 106463929 106464139 + 10.7 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger -136894 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr3-10263 chr3 123960302 123960512 + 10.7 0.000 intron (NM_022757, intron 1 of 11) MIR|SINE|MIR 822 NM_001366335 64770 Hs.645028 NM_022757 ENSG00000175455 CCDC14 - coiled-coil domain containing 14 protein-coding chr6-4243 chr6 6709250 6709460 + 10.7 0.000 Intergenic Intergenic -86529 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr16-4829 chr16 87471624 87471834 + 10.7 0.000 intron (NM_015144, intron 1 of 12) intron (NM_015144, intron 1 of 12) 20125 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr4-7221 chr4 42861752 42861962 + 10.7 0.000 Intergenic Intergenic -31409 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr4-2198 chr4 123134488 123134698 + 10.7 0.000 intron (NM_001345856, intron 14 of 15) L1M2|LINE|L1 211515 NM_001317799 166378 Hs.709648 NM_145207 ENSG00000145375 SPATA5 AFG2|EHLMRS|SPAF spermatogenesis associated 5 protein-coding chr11-2165 chr11 117025134 117025344 + 10.7 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 73189 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr16-2067 chr16 83530341 83530551 + 10.7 0.000 intron (NM_001220489, intron 6 of 12) intron (NM_001220489, intron 6 of 12) 22100 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr3-4300 chr3 160395353 160395563 + 10.7 0.000 intron (NR_148403, intron 2 of 20) intron (NR_148403, intron 2 of 20) 3767 NM_020800 57560 Hs.478095 NM_020800 ENSG00000068885 IFT80 ATD2|SRTD2|WDR56 intraflagellar transport 80 protein-coding chr12-2112 chr12 56233683 56233893 + 10.7 0.000 intron (NM_173596, intron 5 of 12) L3|LINE|CR1 3071 NM_001135195 283375 Hs.591018 NM_173596 ENSG00000139540 SLC39A5 LZT-Hs7|MYP24|ZIP5 solute carrier family 39 member 5 protein-coding chr6-1616 chr6 68054622 68054832 + 10.7 0.000 promoter-TSS (NR_125869) promoter-TSS (NR_125869) -624 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr16-1880 chr16 84791191 84791401 + 10.7 0.000 Intergenic Intergenic -28689 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr2-6935 chr2 111859992 111860202 + 10.7 0.000 intron (NM_022662, intron 10 of 47) AluJb|SINE|Alu 24096 NM_022662 64682 Hs.436527 NM_022662 ENSG00000153107 ANAPC1 APC1|MCPR|TSG24 anaphase promoting complex subunit 1 protein-coding chr1-1799 chr1 109500969 109501179 + 10.7 0.000 TTS (NM_001134402) TTS (NM_001134402) 6980 NM_001134404 284613 Hs.514682 NM_182580 ENSG00000174151 CYB561D1 - cytochrome b561 family member D1 protein-coding chr8-2166 chr8 89647621 89647831 + 10.7 0.000 Intergenic Intergenic 109985 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr6-4005 chr6 118177453 118177663 + 10.7 0.000 intron (NM_001029858, intron 2 of 7) intron (NM_001029858, intron 2 of 7) 91655 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr12-4646 chr12 44930804 44931014 + 10.7 0.000 Intergenic Intergenic -16981 NM_001145110 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chrX-875 chrX 153766117 153766327 + 10.7 0.000 exon (NM_001163257, exon 3 of 37) exon (NM_001163257, exon 3 of 37) 1973 NM_005393 5365 Hs.632833 NM_005393 ENSG00000198753 PLXNB3 PLEXB3|PLEXR|PLXN6 plexin B3 protein-coding chr6-3986 chr6 112251269 112251479 + 10.7 0.000 intron (NR_121193, intron 2 of 2) intron (NR_121193, intron 2 of 2) 3193 NM_002290 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr9-2080 chr9 72442235 72442445 + 10.7 0.000 Intergenic Intergenic -77132 NM_001102420 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr7-6044 chr7 111039841 111040051 + 10.7 0.000 intron (NM_032549, intron 3 of 5) AluSq2|SINE|Alu -51060 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr16-4011 chr16 613235 613445 + 10.7 0.000 intron (NM_021168, intron 1 of 5) intron (NM_021168, intron 1 of 5) -17645 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr8-5073 chr8 38465325 38465535 + 10.7 0.000 intron (NM_001174067, intron 1 of 18) intron (NM_001174067, intron 1 of 18) 2294 NM_001174066 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr10-2531 chr10 51176965 51177175 + 10.7 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 102583 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr1-6095 chr1 119009194 119009404 + 10.7 0.000 Intergenic Intergenic -7894 NR_135035 105378933 Hs.599652 NR_135034 ENSG00000226172 LOC105378933 - uncharacterized LOC105378933 ncRNA chr9-3641 chr9 92721884 92722094 + 10.7 0.000 intron (NM_001003800, intron 3 of 6) intron (NM_001003800, intron 3 of 6) 42844 NM_001003800 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chr6-1587 chr6 26055080 26055290 + 10.7 0.000 TTS (NM_005319) TTS (NM_005319) 1286 NM_005319 3006 Hs.7644 NM_005319 ENSG00000187837 HIST1H1C H1.2|H1C|H1F2|H1s-1 histone cluster 1 H1 family member c protein-coding chr7-2465 chr7 1400999 1401209 + 10.7 0.000 Intergenic LTR8A|LTR|ERV1 58366 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr3-2815 chr3 12343262 12343472 + 10.7 0.000 intron (NM_001330615, intron 1 of 5) intron (NM_001330615, intron 1 of 5) -8050 NM_001354668 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr1-8421 chr1 88736804 88737014 + 10.7 0.000 intron (NM_001320708, intron 1 of 20) intron (NM_001320708, intron 1 of 20) -51705 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr12-6299 chr12 51334622 51334832 + 10.7 0.000 intron (NM_001971, intron 6 of 7) AluY|SINE|Alu -10059 NM_001290007 51411 Hs.14770 NM_016293 ENSG00000110934 BIN2 BRAP-1 bridging integrator 2 protein-coding chr4-2675 chr4 1340296 1340506 + 10.7 0.000 TTS (NM_001017405) TTS (NM_001017405) -6807 NM_020894 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chr5-2669 chr5 32170781 32170991 + 10.7 0.000 intron (NM_022130, intron 1 of 3) intron (NM_022130, intron 1 of 3) 3433 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr11-2966 chr11 77436724 77436934 + 10.7 0.000 intron (NM_001128620, intron 1 of 15) intron (NM_001128620, intron 1 of 15) 37234 NM_002576 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr5-7553 chr5 39075412 39075622 + 10.7 0.000 Intergenic L2b|LINE|L2 -1118 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr15-1765 chr15 65312607 65312817 + 10.7 0.000 Intergenic Intergenic 8035 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr7-6871 chr7 51432282 51432492 + 10.7 0.000 Intergenic Intergenic -39131 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr1-12396 chr1 9130308 9130518 + 10.7 0.000 Intergenic L1MB7|LINE|L1 -1311 NM_024980 80045 Hs.632367 NM_024980 ENSG00000180758 GPR157 - G protein-coupled receptor 157 protein-coding chr10-2849 chr10 59757979 59758189 + 10.7 0.000 Intergenic MER92-int|LTR|ERV1 -4629 NM_001304731 100507027 Hs.648790 NM_001304731 ENSG00000227877 MRLN LINC00948|Linc-RAM|M1|MLN|MUSER1 myoregulin protein-coding chr20-1570 chr20 1226335 1226545 + 10.7 0.000 intron (NM_001136566, intron 1 of 13) CpG 320 NM_001136566 642636 Hs.713451 NM_001136566 ENSG00000244588 RAD21L1 RAD21L|dJ545L17.2 RAD21 cohesin complex component like 1 protein-coding chr11-2692 chr11 102240580 102240790 + 10.7 0.000 Intergenic L2a|LINE|L2 -76799 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr4-5478 chr4 69879889 69880099 + 10.7 0.000 Intergenic L1PA12|LINE|L1 -19849 NM_005420 6783 Hs.479898 NM_005420 ENSG00000109193 SULT1E1 EST|EST-1|ST1E1|STE sulfotransferase family 1E member 1 protein-coding chr13-4060 chr13 75661155 75661365 + 10.7 0.000 intron (NM_001306080, intron 1 of 30) L2c|LINE|L2 24930 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr18-1564 chr18 31426905 31427115 + 10.7 0.000 promoter-TSS (NR_110788) promoter-TSS (NR_110788) -22 NR_110788 101927718 Hs.625473 NR_110788 ENSG00000266729 DSG1-AS1 - DSG1 antisense RNA 1 ncRNA chr10-3517 chr10 71385892 71386102 + 10.7 0.000 Intergenic MIR|SINE|MIR -10923 NM_052836 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr11-4299 chr11 68002982 68003192 + 10.7 0.000 exon (NM_030930, exon 3 of 11) exon (NM_030930, exon 3 of 11) 1010 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr17-2562 chr17 58336656 58336866 + 10.7 0.000 promoter-TSS (NR_039889) promoter-TSS (NR_039889) -441 NR_038417 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr18-701 chr18 61322279 61322489 + 10.7 0.000 Intergenic Intergenic -11046 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr11-4736 chr11 74727958 74728168 + 10.7 0.000 intron (NM_015424, intron 1 of 11) intron (NM_015424, intron 1 of 11) 3363 NM_015424 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr2-9172 chr2 213617779 213617989 + 10.7 0.000 intron (NR_047660, intron 9 of 14) intron (NR_047660, intron 9 of 14) -140183 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr2-5710 chr2 213862229 213862439 + 10.7 0.000 intron (NR_047660, intron 9 of 14) MIR3|SINE|MIR 104267 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr20-1203 chr20 11302569 11302779 + 10.7 0.000 Intergenic L2b|LINE|L2 -29291 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr9-3651 chr9 94065624 94065834 + 10.7 0.000 intron (NM_177995, intron 2 of 9) intron (NM_177995, intron 2 of 9) -18700 NM_152422 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding chr4-3626 chr4 11440464 11440674 + 10.7 0.000 Intergenic L1ME3A|LINE|L1 -11675 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr1-4462 chr1 6595916 6596126 + 10.7 0.000 intron (NM_001324309, intron 2 of 3) intron (NM_001324309, intron 2 of 3) 6848 NM_014851 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr2-13816 chr2 175284623 175284833 + 10.7 0.000 Intergenic MIR|SINE|MIR -103018 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr18-1561 chr18 28494295 28494505 + 10.7 0.000 Intergenic MER92B|LTR|ERV1 -317270 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr12-6178 chr12 13674955 13675165 + 10.7 0.000 intron (NM_000834, intron 4 of 12) MIR|SINE|MIR -298315 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr2-3705 chr2 219991060 219991270 + 10.7 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -84600 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr11-6263 chr11 57941007 57941217 + 10.7 0.000 Intergenic Intergenic -82769 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr5-2239 chr5 10702046 10702256 + 10.7 0.000 intron (NM_004394, intron 2 of 3) L2b|LINE|L2 59083 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr9-8632 chr9 129164170 129164380 + 10.7 0.000 Intergenic Intergenic 13986 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr4-2908 chr4 83659041 83659251 + 10.7 0.000 Intergenic Intergenic 123038 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr15-1609 chr15 80825556 80825766 + 10.7 0.000 intron (NM_018689, intron 1 of 28) intron (NM_018689, intron 1 of 28) 16412 NR_030393 693132 NR_030393 ENSG00000208003 MIR549A MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a microRNA 549a ncRNA chr2-7006 chr2 144414389 144414599 + 10.7 0.000 intron (NM_001171653, intron 3 of 8) intron (NM_001171653, intron 3 of 8) -81425 NM_001354360 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr18-1197 chr18 30623812 30624022 + 10.7 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger 325007 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr1-3741 chr1 246248501 246248711 + 10.7 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 168806 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr5-1647 chr5 173825298 173825508 + 10.7 0.000 Intergenic Intergenic -34461 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr2-2871 chr2 177754005 177754215 + 10.7 0.000 intron (NM_001077197, intron 11 of 20) intron (NM_001077197, intron 11 of 20) 80788 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA chr9-2679 chr9 70413166 70413376 + 10.7 0.000 exon (NM_001206, exon 1 of 2) exon (NM_001206, exon 1 of 2) 1386 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr18-996 chr18 28065577 28065787 + 10.7 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) -29041 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr7-7662 chr7 150888042 150888252 + 10.7 0.000 Intergenic MER9a2|LTR|ERVK 35630 NM_001272072 26 Hs.647097 NM_001091 ENSG00000002726 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase copper containing 1 protein-coding chr10-3324 chr10 6009612 6009822 + 10.7 0.000 TTS (NM_001308242) TTS (NM_001308242) -30976 NM_001351095 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr19-2894 chr19 47218725 47218935 + 10.7 0.000 Intergenic Intergenic -8112 NR_036158 100422899 NR_036158 ENSG00000265134 MIR3190 mir-3190 microRNA 3190 ncRNA chr4-6172 chr4 41051247 41051457 + 10.7 0.000 intron (NM_001330658, intron 3 of 15) intron (NM_001330658, intron 3 of 15) 163190 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr19-2136 chr19 3396412 3396622 + 10.7 0.000 intron (NM_001245002, intron 2 of 10) intron (NM_001245002, intron 2 of 10) 29934 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr19-1601 chr19 29606066 29606276 + 10.7 0.000 promoter-TSS (NM_006627) promoter-TSS (NM_006627) -112 NR_027368 10775 Hs.412870 NM_006627 ENSG00000105171 POP4 RPP29 POP4 homolog, ribonuclease P/MRP subunit protein-coding chr7-3824 chr7 98294785 98294995 + 10.7 0.000 intron (NM_018842, intron 12 of 13) intron (NM_018842, intron 12 of 13) 13204 NM_001159491 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr22-2408 chr22 17742575 17742785 + 10.7 0.000 intron (NM_001244570, intron 1 of 3) intron (NM_001244570, intron 1 of 3) 21579 NR_036168 100423025 NR_036168 ENSG00000264757 MIR3198-1 MIR3198|mir-3198-1 microRNA 3198-1 ncRNA chr10-2373 chr10 98618982 98619192 + 10.7 0.000 intron (NM_021828, intron 8 of 11) intron (NM_021828, intron 8 of 11) -172124 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr17-4205 chr17 30208174 30208384 + 10.7 0.000 intron (NM_001045, intron 12 of 14) intron (NM_001045, intron 12 of 14) 27418 NM_001045 6532 Hs.29792 NM_001045 ENSG00000108576 SLC6A4 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT solute carrier family 6 member 4 protein-coding chr11-2331 chr11 71114371 71114581 + 10.7 0.000 intron (NM_012309, intron 3 of 24) intron (NM_012309, intron 3 of 24) 110320 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr1-3376 chr1 171841475 171841685 + 10.7 0.000 promoter-TSS (NM_001350204) promoter-TSS (NM_001350204) 82 NM_001136127 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chr15-4264 chr15 35015531 35015741 + 10.7 0.000 Intergenic MER115|DNA|hAT-Tip100 -27349 NM_014106 54989 Hs.744990 NM_014106 ENSG00000198146 ZNF770 PRO1914 zinc finger protein 770 protein-coding chr7-3876 chr7 105687848 105688058 + 10.7 0.000 intron (NM_020725, intron 3 of 11) LTR35A|LTR|ERV1 -8791 NM_138495 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr9-4184 chr9 32655689 32655899 + 10.7 0.000 Intergenic L1PA14|LINE|L1 -20125 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr12-7206 chr12 50059741 50059951 + 10.7 0.000 non-coding (NR_046389, exon 3 of 13) non-coding (NR_046389, exon 3 of 13) 2250 NR_046389 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr6-2595 chr6 100504948 100505158 + 10.7 0.000 Intergenic L2a|LINE|L2 -41378 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr10-5089 chr10 45820531 45820741 + 10.7 0.000 Intergenic L1MC4a|LINE|L1 -3312 NM_001351234 643479 Hs.522900 NM_001351234 FAM25E FAM25D family with sequence similarity 25 member E protein-coding chr15-1651 chr15 98896969 98897179 + 10.7 0.000 intron (NM_000875, intron 4 of 20) intron (NM_000875, intron 4 of 20) 108582 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr2-5802 chr2 231002063 231002273 + 10.7 0.000 intron (NM_139073, intron 2 of 4) L1MC|LINE|L1 6044 NM_139073 130560 Hs.745178 NM_139073 ENSG00000173699 SPATA3 TSARG1 spermatogenesis associated 3 protein-coding chr1-5083 chr1 109969331 109969541 + 10.7 0.000 Intergenic L1MB3|LINE|L1 -15329 NM_001242673 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr5-3654 chr5 149732019 149732229 + 10.7 0.000 promoter-TSS (NR_029870) promoter-TSS (NR_029870) -701 NR_029870 494327 NR_029870 ENSG00000199047 MIR378A MIR378|MIRN378|hsa-mir-378|hsa-mir-378a|miRNA378 microRNA 378a ncRNA chr22-3078 chr22 42427529 42427739 + 10.7 0.000 intron (NM_001371362, intron 3 of 7) MER58B|DNA|hAT-Charlie 4725 NM_001318323 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr5-1081 chr5 34674400 34674610 + 10.7 0.000 intron (NM_001145520, intron 1 of 17) intron (NM_001145520, intron 1 of 17) -10002 NM_001145525 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr6-5357 chr6 149318729 149318939 + 10.7 0.000 intron (NM_015093, intron 1 of 8) intron (NM_015093, intron 1 of 8) 534 NM_015093 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr2-6510 chr2 191582574 191582784 + 10.7 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -95393 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr15-2019 chr15 48602729 48602939 + 10.7 0.000 intron (NM_000138, intron 4 of 65) intron (NM_000138, intron 4 of 65) 42954 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr6-3868 chr6 44935659 44935869 + 10.7 0.000 intron (NM_181356, intron 11 of 12) intron (NM_181356, intron 11 of 12) 262006 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr8-7079 chr8 117563323 117563533 + 10.7 0.000 Intergenic Intergenic 42715 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr8-6671 chr8 80591499 80591709 + 10.7 0.000 Intergenic MLT2D|LTR|ERVL 105378 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr10-3465 chr10 59577811 59578021 + 10.7 0.000 Intergenic Intergenic 131975 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr8-4293 chr8 96790938 96791148 + 10.7 0.000 intron (NM_016134, intron 2 of 7) intron (NM_016134, intron 2 of 7) 145801 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr7-1277 chr7 135508968 135509178 + 10.7 0.000 intron (NM_013316, intron 1 of 10) intron (NM_013316, intron 1 of 10) 1029 NM_013316 4850 Hs.490224 NM_013316 ENSG00000080802 CNOT4 CLONE243|NOT4|NOT4H CCR4-NOT transcription complex subunit 4 protein-coding chr7-3998 chr7 139776550 139776760 + 10.7 0.000 intron (NM_001113239, intron 1 of 14) intron (NM_001113239, intron 1 of 14) 1343 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr4-6034 chr4 2126924 2127134 + 10.7 0.000 intron (NM_181808, intron 19 of 25) intron (NM_181808, intron 19 of 25) 67702 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr9-2613 chr9 14031187 14031397 + 10.7 0.000 Intergenic Intergenic 103321 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chrX-2672 chrX 116846778 116846988 + 10.7 0.000 Intergenic L2b|LINE|L2 -29023 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr9-2975 chr9 23587880 23588090 + 10.7 0.000 intron (NR_121602, intron 11 of 27) MIRb|SINE|MIR 84414 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr11-3315 chr11 108170396 108170606 + 10.7 0.000 intron (NM_001321307, intron 13 of 17) intron (NM_001321307, intron 13 of 17) 48934 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr20-1599 chr20 5448754 5448964 + 10.7 0.000 Intergenic Intergenic -3111 NR_038240 100507629 Hs.121383 NR_038239 ENSG00000226995 LINC00658 - long intergenic non-protein coding RNA 658 ncRNA chr1-2829 chr1 46194182 46194392 + 10.7 0.000 exon (NM_017739, exon 9 of 22) exon (NM_017739, exon 9 of 22) 3212 NM_001290130 55624 Hs.525134 NM_017739 ENSG00000085998 POMGNT1 GNTI.2|GnT I.2|LGMD2O|LGMDR15|MEB|MGAT1.2|RP76|gnT-I.2 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) protein-coding chr1-5445 chr1 44645597 44645807 + 10.7 0.000 intron (NM_001319957, intron 11 of 13) intron (NM_001319957, intron 11 of 13) 25354 NR_145816 109623472 NR_145816 SNORD145 - small nucleolar RNA, C/D box 145 snoRNA chrX-310 chrX 68647723 68647933 + 10.7 0.000 5' UTR (NM_001142503, exon 1 of 15) 5' UTR (NM_001142503, exon 1 of 15) 159 NM_014725 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr22-1130 chr22 41257908 41258118 + 10.7 0.000 exon (NM_001278651, exon 8 of 17) exon (NM_001278651, exon 8 of 17) -4963 NR_106949 102466758 NR_106949 ENSG00000274552 MIR6889 hsa-mir-6889 microRNA 6889 ncRNA chr2-3428 chr2 85355344 85355554 + 10.7 0.000 promoter-TSS (NM_017750) promoter-TSS (NM_017750) 680 NM_001135021 84173 Hs.269990 NM_032213 ENSG00000115459 ELMOD3 DFNB88|LST3|RBED1|RBM29 ELMO domain containing 3 protein-coding chr17-3445 chr17 30915809 30916019 + 10.7 0.000 Intergenic L2a|LINE|L2 -5822 NM_001346714 55803 Hs.514063 NM_018404 ENSG00000184060 ADAP2 CENTA2|HSA272195|cent-b ArfGAP with dual PH domains 2 protein-coding chr5-3146 chr5 65664243 65664453 + 10.7 0.000 exon (NM_001243737, exon 11 of 12) exon (NM_001243737, exon 11 of 12) 39321 NM_001365342 80006 Hs.591760 NM_024941 ENSG00000113597 TRAPPC13 C5orf44|SHLD3 trafficking protein particle complex 13 protein-coding chr15-1095 chr15 64810190 64810400 + 10.7 0.000 Intergenic MIRb|SINE|MIR 15352 NM_025049 80119 Hs.112160 NM_025049 ENSG00000140451 PIF1 C15orf20|PIF PIF1 5'-to-3' DNA helicase protein-coding chr12-3150 chr12 47735068 47735278 + 10.7 0.000 3' UTR (NM_001098531, exon 28 of 28) 3' UTR (NM_001098531, exon 28 of 28) -9683 NM_001172440 8909 Hs.997 NM_006025 ENSG00000111405 ENDOU P11|PP11|PRSS26 endonuclease, poly(U) specific protein-coding chr8-1617 chr8 25276047 25276257 + 10.7 0.000 intron (NM_024940, intron 4 of 51) intron (NM_024940, intron 4 of 51) -69250 NR_106936 102465527 NR_106936 ENSG00000274988 MIR6876 hsa-mir-6876 microRNA 6876 ncRNA chr2-7745 chr2 37706897 37707107 + 10.7 0.000 Intergenic Intergenic -34467 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr9-1554 chr9 137354512 137354722 + 10.7 0.000 intron (NM_017820, intron 9 of 21) intron (NM_017820, intron 9 of 21) -52346 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr15-2692 chr15 82217813 82218023 + 10.7 0.000 intron (NM_001040610, intron 12 of 17) MLT1E1A|LTR|ERVL-MaLR 44610 NM_001322845 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr8-3960 chr8 48431074 48431284 + 10.7 0.000 Intergenic Intergenic -120388 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr16-1025 chr16 89894250 89894460 + 10.7 0.000 intron (NM_014972, intron 7 of 17) intron (NM_014972, intron 7 of 17) 20763 NM_014972 22980 Hs.415342 NM_014972 ENSG00000141002 TCF25 FKSG26|Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 protein-coding chr17-3726 chr17 20967940 20968150 + 10.7 0.000 intron (NR_160717, intron 4 of 4) (TG)n|Simple_repeat|Simple_repeat 29479 NR_160718 339260 Hs.661076 NR_123730 ENSG00000233098 LOC339260 - uncharacterized LOC339260 ncRNA chr9-2058 chr9 33001476 33001686 + 10.7 0.000 promoter-TSS (NM_175069) promoter-TSS (NM_175069) -5 NM_001195249 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr4-3003 chr4 124207130 124207340 + 10.7 0.000 Intergenic L2|LINE|L2 351199 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr10-3601 chr10 91133801 91134011 + 10.7 0.000 Intergenic CR1_Mam|LINE|CR1 19174 NR_002779 119369 Hs.441287 NR_002779 NUDT9P1 C10orf98|bA56M3.1 nudix hydrolase 9 pseudogene 1 pseudo chr14-1064 chr14 88013867 88014077 + 10.7 0.000 3' UTR (NM_003608, exon 2 of 2) 3' UTR (NM_003608, exon 2 of 2) 8837 NM_003608 8477 Hs.443243 NM_003608 ENSG00000140030 GPR65 TDAG8|hTDAG8 G protein-coupled receptor 65 protein-coding chr19-1532 chr19 11324404 11324614 + 10.7 0.000 3' UTR (NM_004283, exon 5 of 5) 3' UTR (NM_004283, exon 5 of 5) 15148 NM_004283 9545 Hs.744916 NM_004283 ENSG00000105514 RAB3D D2-2|GOV|RAB16|RAD3D RAB3D, member RAS oncogene family protein-coding chr8-2094 chr8 133424405 133424615 + 10.7 0.000 Intergenic MIR|SINE|MIR -127206 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr5-8317 chr5 117026561 117026771 + 10.7 0.000 Intergenic Intergenic -264457 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr5-2840 chr5 61228632 61228842 + 10.7 0.000 intron (NR_109908, intron 3 of 3) intron (NR_109908, intron 3 of 3) 36192 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr6-3278 chr6 155224198 155224408 + 10.7 0.000 intron (NM_001010927, intron 1 of 12) intron (NM_001010927, intron 1 of 12) 7337 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr13-3682 chr13 35096304 35096514 + 10.7 0.000 intron (NM_015678, intron 10 of 57) intron (NM_015678, intron 10 of 57) 154122 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr2-6737 chr2 33206062 33206272 + 10.7 0.000 intron (NM_206943, intron 7 of 33) intron (NM_206943, intron 7 of 33) 71570 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr3-1179 chr3 172040503 172040713 + 10.7 0.000 promoter-TSS (NM_001135095) promoter-TSS (NM_001135095) 77 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr11-4104 chr11 34154136 34154346 + 10.7 0.000 intron (NM_145804, intron 16 of 16) intron (NM_145804, intron 16 of 16) 48612 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chrX-1608 chrX 106774941 106775151 + 10.7 0.000 intron (NM_024539, intron 2 of 6) intron (NM_024539, intron 2 of 6) -27627 NM_017752 54885 Hs.351798 NM_017752 ENSG00000133138 TBC1D8B GRAMD8B TBC1 domain family member 8B protein-coding chrX-817 chrX 88298632 88298842 + 10.7 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -448488 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr22-1808 chr22 33293753 33293963 + 10.7 0.000 intron (NM_133642, intron 12 of 14) L2b|LINE|L2 142811 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr7-2732 chr7 40880145 40880355 + 10.7 0.000 Intergenic L1MC5a|LINE|L1 99689 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr11-5285 chr11 38178024 38178234 + 10.7 0.000 Intergenic Intergenic 239528 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr4-2040 chr4 7518422 7518632 + 10.7 0.000 intron (NM_020777, intron 2 of 26) intron (NM_020777, intron 2 of 26) 58499 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr20-835 chr20 21303526 21303736 + 10.7 0.000 exon (NM_001317960, exon 1 of 30) exon (NM_001317960, exon 1 of 30) 133 NM_001317960 22803 Hs.255932 NM_012255 ENSG00000088930 XRN2 - 5'-3' exoribonuclease 2 protein-coding chr9-1533 chr9 130043301 130043511 + 10.7 0.000 promoter-TSS (NM_015033) promoter-TSS (NM_015033) -217 NM_001363755 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr4-7449 chr4 69095497 69095707 + 10.7 0.000 promoter-TSS (NM_001074) promoter-TSS (NM_001074) -872 NM_001330719 7364 Hs.654424 NM_001074 ENSG00000171234 UGT2B7 UDPGT 2B7|UDPGT 2B9|UDPGT2B7|UDPGTH2|UDPGTh-2|UGT2B9 UDP glucuronosyltransferase family 2 member B7 protein-coding chr3-3513 chr3 24060049 24060259 + 10.7 0.000 Intergenic Intergenic 43093 NR_026834 152024 Hs.385606 NR_026834 ENSG00000224074 LINC00691 - long intergenic non-protein coding RNA 691 ncRNA chr5-3625 chr5 135677115 135677325 + 10.7 0.000 intron (NM_001349335, intron 3 of 10) L1MA4A|LINE|L1 -23285 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr1-4233 chr1 185401128 185401338 + 10.7 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -66194 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chrX-1422 chrX 39000498 39000708 + 10.7 0.000 Intergenic Intergenic -196720 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr18-838 chr18 13388181 13388391 + 10.7 0.000 intron (NM_181482, intron 3 of 5) intron (NM_181482, intron 3 of 5) 39248 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr9-2494 chr9 94624679 94624889 + 10.7 0.000 intron (NM_000507, intron 1 of 6) intron (NM_000507, intron 1 of 6) 14734 NM_000507 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr9-1453 chr9 136798847 136799057 + 10.7 0.000 intron (NM_001039374, intron 1 of 13) intron (NM_001039374, intron 1 of 13) 2614 NM_001039374 84960 Hs.728796 NM_032874 ENSG00000213213 CCDC183 KIAA1984|PARF|bA216L13.7 coiled-coil domain containing 183 protein-coding chr18-1014 chr18 55900732 55900942 + 10.7 0.000 intron (NR_110755, intron 1 of 3) intron (NR_110755, intron 1 of 3) 19362 NR_110755 101927273 Hs.434335 NR_110755 ENSG00000260930 LINC01416 - long intergenic non-protein coding RNA 1416 ncRNA chr7-2775 chr7 73154614 73154824 + 10.7 0.000 promoter-TSS (NR_003580) promoter-TSS (NR_003580) -205 NR_003580 100093631 Hs.488624 NR_003580 ENSG00000233369 GTF2IP4 GTF2I general transcription factor IIi pseudogene 4 pseudo chr19-1295 chr19 1725624 1725834 + 10.7 0.000 Intergenic CpG -27777 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr2-9515 chr2 237482447 237482657 + 10.7 0.000 Intergenic L2b|LINE|L2 -3858 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr16-2372 chr16 64562678 64562888 + 10.7 0.000 Intergenic Intergenic 559280 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr18-569 chr18 48997016 48997226 + 10.7 0.000 Intergenic Intergenic -26582 NR_148999 100129878 Hs.437704 NR_148999 ENSG00000264269 LOC100129878 - uncharacterized LOC100129878 ncRNA chr3-2170 chr3 171712276 171712486 + 10.7 0.000 intron (NM_002662, intron 9 of 26) intron (NM_002662, intron 9 of 26) 98102 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr2-3866 chr2 37711393 37711603 + 10.7 0.000 Intergenic Intergenic -38963 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr17-3633 chr17 3558888 3559098 + 10.7 0.000 Intergenic Intergenic -1181 NM_001258205 162514 Hs.446255 NM_145068 ENSG00000167723 TRPV3 FNEPPK2|OLMS|VRL3 transient receptor potential cation channel subfamily V member 3 protein-coding chr2-4163 chr2 180366650 180366860 + 10.7 0.000 Intergenic Intergenic -325349 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr11-5626 chr11 119316883 119317093 + 10.7 0.000 intron (NM_006500, intron 1 of 15) CpG 142 NM_006500 4162 Hs.599039 NM_006500 ENSG00000076706 MCAM CD146|HEMCAM|METCAM|MUC18|MelCAM melanoma cell adhesion molecule protein-coding chr9-3152 chr9 110767812 110768022 + 10.7 0.000 exon (NM_005592, exon 8 of 14) exon (NM_005592, exon 8 of 14) 39655 NM_001369398 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr17-4637 chr17 12866945 12867155 + 10.7 0.000 intron (NM_001321164, intron 1 of 20) MER34A1|LTR|ERV1 50292 NR_039747 100616494 NR_039747 ENSG00000265503 MIR1269B - microRNA 1269b ncRNA chr17-3138 chr17 44358817 44359027 + 10.7 0.000 intron (NM_198475, intron 3 of 7) intron (NM_198475, intron 3 of 7) 4931 NM_198475 284069 Hs.154001 NM_198475 ENSG00000161682 FAM171A2 - family with sequence similarity 171 member A2 protein-coding chr1-9922 chr1 75427183 75427393 + 10.7 0.000 intron (NM_001320285, intron 2 of 25) intron (NM_001320285, intron 2 of 25) 183826 NM_001320287 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr17-2664 chr17 29611018 29611228 + 10.7 0.000 intron (NM_152345, intron 8 of 14) MIRb|SINE|MIR 6994 NM_001351301 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chr8-3893 chr8 38529049 38529259 + 10.7 0.000 promoter-TSS (NM_207412) promoter-TSS (NM_207412) -492 NM_001303531 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chrX-3703 chrX 111946007 111946217 + 10.7 0.000 intron (NM_012471, intron 2 of 10) intron (NM_012471, intron 2 of 10) 64215 NM_001195577 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr10-3701 chr10 108413199 108413409 + 10.7 0.000 Intergenic Intergenic -344011 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr7-3740 chr7 71710816 71711026 + 10.7 0.000 exon (NM_022479, exon 10 of 11) exon (NM_022479, exon 10 of 11) -403151 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr6-4165 chr6 870278 870488 + 10.7 0.000 intron (NR_110853, intron 1 of 2) L1MB7|LINE|L1 1885 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr11-10491 chr11 118359596 118359806 + 10.7 0.000 intron (NM_001204077, intron 1 of 19) intron (NM_001204077, intron 1 of 19) 101 NM_004788 9354 Hs.75275 NM_004788 ENSG00000110344 UBE4A E4|UBOX2|UFD2 ubiquitination factor E4A protein-coding chr4-6439 chr4 136334897 136335107 + 10.7 0.000 Intergenic Intergenic -421322 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr11-8977 chr11 21197780 21197990 + 10.7 0.000 intron (NM_201551, intron 13 of 18) MLT1G3|LTR|ERVL-MaLR 528299 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr5-3339 chr5 134139329 134139539 + 10.7 0.000 intron (NR_033449, intron 3 of 7) intron (NR_033449, intron 3 of 7) 15816 NM_001366502 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr4-3317 chr4 184901763 184901973 + 10.7 0.000 Intergenic Intergenic -2407 NR_039975 100506229 Hs.378150 NR_039975 LINC01093 - long intergenic non-protein coding RNA 1093 ncRNA chr13-1109 chr13 19888928 19889138 + 10.7 0.000 Intergenic L1M8|LINE|L1 -25384 NM_001142684 9205 Hs.530988 NM_014242 ENSG00000132950 ZMYM5 HSPC050|MYM|ZNF198L1|ZNF237 zinc finger MYM-type containing 5 protein-coding chr4-6516 chr4 164711047 164711257 + 10.7 0.000 Intergenic AluSz6|SINE|Alu -42979 NM_001352885 100505989 Hs.328236 NM_001352885 ENSG00000248771 SMIM31 LINC01207 small integral membrane protein 31 protein-coding chr3-8750 chr3 1857992 1858202 + 10.7 0.000 Intergenic MER33|DNA|hAT-Charlie -240706 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr9-2616 chr9 15697600 15697810 + 10.7 0.000 intron (NM_001355547, intron 10 of 24) Tigger1|DNA|TcMar-Tigger 133727 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr2-12130 chr2 36861529 36861739 + 10.7 0.000 intron (NM_003162, intron 12 of 17) MER58C|DNA|hAT-Charlie 104902 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr20-1344 chr20 14634900 14635110 + 10.7 0.000 intron (NM_001351663, intron 4 of 17) intron (NM_001351663, intron 4 of 17) 80621 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA chr20-686 chr20 63822062 63822272 + 10.7 0.000 non-coding (NR_110081, exon 3 of 3) non-coding (NR_110081, exon 3 of 3) 9097 NM_001369741 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr1-7378 chr1 25085744 25085954 + 10.7 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 62346 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr15-2587 chr15 60155800 60156010 + 10.7 0.000 Intergenic Intergenic 151594 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr6-966 chr6 70413119 70413329 + 10.7 0.000 promoter-TSS (NM_001351607) promoter-TSS (NM_001351607) -180 NM_001351599 57579 Hs.211700 NM_020819 ENSG00000082269 FAM135A KIAA1411 family with sequence similarity 135 member A protein-coding chr7-2818 chr7 98131919 98132129 + 10.7 0.000 intron (NM_014916, intron 1 of 13) L1MC5|LINE|L1 25162 NM_014916 22853 Hs.444179 NM_014916 ENSG00000164715 LMTK2 AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk|hBREK lemur tyrosine kinase 2 protein-coding chr5-3779 chr5 67942079 67942289 + 10.7 0.000 Intergenic Intergenic 148971 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA chr11-6941 chr11 111254500 111254710 + 10.7 0.000 intron (NM_198498, intron 1 of 4) intron (NM_198498, intron 1 of 4) 8880 NM_198498 341032 Hs.298685 NM_198498 ENSG00000150750 C11orf53 - chromosome 11 open reading frame 53 protein-coding chr4-2076 chr4 20506851 20507061 + 10.7 0.000 intron (NM_001289135, intron 9 of 35) intron (NM_001289135, intron 9 of 35) -21319 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr20-2332 chr20 10584313 10584523 + 10.7 0.000 intron (NM_001009608, intron 4 of 7) intron (NM_001009608, intron 4 of 7) 65277 NR_106930 102465525 NR_106930 ENSG00000273745 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA chr15-4305 chr15 39075849 39076059 + 10.7 0.000 Intergenic Intergenic -174715 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr22-1742 chr22 22206367 22206577 + 10.7 0.000 Intergenic Intergenic -38314 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr12-5154 chr12 101548946 101549156 + 10.7 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -45880 NM_001254723 4604 Hs.654589 NM_002465 ENSG00000196091 MYBPC1 LCCS4|MYBPCC|MYBPCS myosin binding protein C, slow type protein-coding chr1-3870 chr1 45156710 45156920 + 10.7 0.000 intron (NM_020883, intron 1 of 13) L1M4|LINE|L1 49790 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr17-2760 chr17 82059658 82059868 + 10.7 0.000 intron (NM_022156, intron 11 of 13) intron (NM_022156, intron 11 of 13) 6041 NM_022156 64118 Hs.514599 NM_022156 ENSG00000169718 DUS1L DUS1|PP3111 dihydrouridine synthase 1 like protein-coding chr2-2274 chr2 24918950 24919160 + 10.7 0.000 5' UTR (NM_004036, exon 2 of 22) 5' UTR (NM_004036, exon 2 of 22) 1182 NM_001320613 109 Hs.467898 NM_004036 ENSG00000138031 ADCY3 AC-III|AC3|BMIQ19 adenylate cyclase 3 protein-coding chr2-5155 chr2 27653490 27653700 + 10.7 0.000 exon (NM_001282729, exon 6 of 6) exon (NM_001282729, exon 6 of 6) -9876 NM_018158 22950 Hs.306000 NM_018158 ENSG00000163798 SLC4A1AP HLC3 solute carrier family 4 member 1 adaptor protein protein-coding chr17-2115 chr17 8742419 8742629 + 10.7 0.000 intron (NM_001158261, intron 3 of 5) intron (NM_001158261, intron 3 of 5) 2312 NM_144681 146849 Hs.121438 NM_144681 ENSG00000161973 CCDC42 CCDC42A coiled-coil domain containing 42 protein-coding chr1-6420 chr1 15401302 15401512 + 10.7 0.000 Intergenic Intergenic -8481 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr2-1799 chr2 26818993 26819203 + 10.7 0.000 Intergenic (TGCTCC)n|Simple_repeat|Simple_repeat -29034 NM_020134 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr2-3609 chr2 95328780 95328990 + 10.7 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) -17773 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr15-3206 chr15 72707694 72707904 + 10.7 0.000 intron (NR_045565, intron 3 of 16) intron (NR_045565, intron 3 of 16) 21592 NM_033028 585 Hs.208681 NM_033028 ENSG00000140463 BBS4 - Bardet-Biedl syndrome 4 protein-coding chr8-4105 chr8 69942560 69942770 + 10.7 0.000 Intergenic Intergenic -107687 NM_030958 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr1-6365 chr1 8394790 8395000 + 10.7 0.000 intron (NM_001042681, intron 12 of 22) L2c|LINE|L2 28937 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr5-3314 chr5 126425025 126425235 + 10.7 0.000 intron (NR_146196, intron 1 of 14) intron (NR_146196, intron 1 of 14) 1721 NR_146195 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr1-14682 chr1 61953247 61953457 + 10.7 0.000 intron (NM_001350145, intron 27 of 43) intron (NM_001350145, intron 27 of 43) 107277 NR_162146 113219465 NR_162146 MIR12132 - microRNA 12132 ncRNA chr16-882 chr16 84145063 84145273 + 10.7 0.000 promoter-TSS (NM_001146051) promoter-TSS (NM_001146051) 9 NM_031463 83693 Hs.555992 NM_031463 ENSG00000103160 HSDL1 SDR12C3 hydroxysteroid dehydrogenase like 1 protein-coding chr2-5334 chr2 85313770 85313980 + 10.7 0.000 Intergenic Intergenic 14114 NM_001206840 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr2-3911 chr2 47654310 47654520 + 10.7 0.000 Intergenic LTR18B|LTR|ERVL -84084 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr9-2084 chr9 77515339 77515549 + 10.7 0.000 intron (NR_121184, intron 2 of 4) intron (NR_121184, intron 2 of 4) 67795 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr18-1627 chr18 50740974 50741184 + 10.7 0.000 Intergenic AluJo|SINE|Alu 78937 NM_031939 83876 Hs.30495 NM_031939 ENSG00000134042 MRO B29|C18orf3 maestro protein-coding chr1-2776 chr1 156728751 156728961 + 10.7 0.000 promoter-TSS (NM_001303095) promoter-TSS (NM_001303095) -90 NM_001370151 81875 Hs.301904 NM_030980 ENSG00000143319 ISG20L2 HSD38 interferon stimulated exonuclease gene 20 like 2 protein-coding chr7-3256 chr7 5177215 5177425 + 10.7 0.000 Intergenic Intergenic -12913 NM_016003 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr14-2137 chr14 77666665 77666875 + 10.7 0.000 Intergenic L2a|LINE|L2 41253 NM_006020 8846 Hs.94542 NM_006020 ENSG00000100601 ALKBH1 ABH|ABH1|ALKBH|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding chr14-4570 chr14 47759771 47759981 + 10.7 0.000 Intergenic MLT2F|LTR|ERVL 1228 NR_037503 100500919 NR_037503 ENSG00000263945 MIR548Y - microRNA 548y ncRNA chr5-3141 chr5 61660650 61660860 + 10.7 0.000 intron (NR_126524, intron 2 of 3) intron (NR_126524, intron 2 of 3) 22974 NR_126525 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr12-2597 chr12 120998359 120998569 + 10.7 0.000 intron (NM_001306179, intron 7 of 9) MER46C|DNA|TcMar-Tigger 18023 NM_001286195 64897 Hs.528671 NM_022895 ENSG00000157895 C12orf43 Custos chromosome 12 open reading frame 43 protein-coding chr6-6344 chr6 56026041 56026251 + 10.7 0.000 Intergenic LTR68|LTR|ERV1 65516 NM_001318753 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr3-2526 chr3 33115205 33115415 + 10.7 0.000 intron (NM_006371, intron 1 of 6) intron (NM_006371, intron 1 of 6) 1352 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr8-2250 chr8 58646955 58647165 + 10.7 0.000 intron (NM_003580, intron 1 of 30) L4_A_Mam|LINE|RTE-X 12347 NM_001144772 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr10-875 chr10 48634434 48634644 + 10.7 0.000 intron (NM_001347738, intron 2 of 10) intron (NM_001347738, intron 2 of 10) 17963 NM_001256025 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr2-3363 chr2 240398496 240398706 + 10.7 0.000 Intergenic Intergenic -37062 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr1-11142 chr1 235136948 235137158 + 10.7 0.000 intron (NR_144492, intron 6 of 8) intron (NR_144492, intron 6 of 8) -8216 NM_014765 9804 Hs.533192 NM_014765 ENSG00000173726 TOMM20 MAS20|MOM19|TOM20 translocase of outer mitochondrial membrane 20 protein-coding chr7-1051 chr7 127588547 127588757 + 10.7 0.000 intron (NM_001662, intron 1 of 5) CpG 241 NM_001662 381 Hs.653202 NM_001662 ENSG00000004059 ARF5 - ADP ribosylation factor 5 protein-coding chr1-4811 chr1 21072826 21073036 + 10.7 0.000 intron (NM_003760, intron 1 of 31) MIR|SINE|MIR 38452 NM_003760 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr6-4065 chr6 137393928 137394138 + 10.7 0.000 Intergenic L1ME3Cz|LINE|L1 100361 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr13-1074 chr13 41960236 41960446 + 10.7 0.000 promoter-TSS (NR_039974) promoter-TSS (NR_039974) 744 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr4-3818 chr4 118417449 118417659 + 10.6 0.000 Intergenic MIR|SINE|MIR -64551 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr12-4017 chr12 39050722 39050932 + 10.6 0.000 Intergenic Intergenic -145236 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr13-4003 chr13 69852118 69852328 + 10.6 0.000 intron (NM_001286725, intron 4 of 9) intron (NM_001286725, intron 4 of 9) -254990 NR_002717 6315 Hs.676453 NR_002717 ATXN8OS KLHL1AS|NCRNA00003|SCA8 ATXN8 opposite strand lncRNA ncRNA chr12-2524 chr12 95118496 95118706 + 10.6 0.000 intron (NM_018351, intron 8 of 20) intron (NM_018351, intron 8 of 20) -44983 NM_001127362 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding chr17-5697 chr17 53565559 53565769 + 10.6 0.000 Intergenic AluY|SINE|Alu -257263 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr1-11243 chr1 248020743 248020953 + 10.6 0.000 intron (NM_001304535, intron 1 of 1) L1PA6|LINE|L1 -1100 NM_001258284 81466 Hs.742583 NM_001258284 ENSG00000197454 OR2L5 OR2L11|OR2L5P olfactory receptor family 2 subfamily L member 5 protein-coding chr8-4989 chr8 140881311 140881521 + 10.6 0.000 intron (NR_148037, intron 4 of 34) intron (NR_148037, intron 4 of 34) 119588 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr2-8705 chr2 153101250 153101460 + 10.6 0.000 Intergenic Intergenic 377407 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr5-4920 chr5 73473565 73473775 + 10.6 0.000 promoter-TSS (NR_126410) promoter-TSS (NR_126410) -704 NR_126410 104355294 Hs.127927 NR_126410 ENSG00000251324 LINC01386 - long intergenic non-protein coding RNA 1386 ncRNA chr7-2508 chr7 41880200 41880410 + 10.6 0.000 Intergenic Intergenic -177215 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chrX-558 chrX 30702831 30703041 + 10.6 0.000 intron (NM_001128127, intron 10 of 19) intron (NM_001128127, intron 10 of 19) 49577 NM_203391 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr14-3051 chr14 59804117 59804327 + 10.6 0.000 intron (NM_021136, intron 1 of 8) L1MC3|LINE|L1 66554 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr13-816 chr13 26924934 26925144 + 10.6 0.000 Intergenic AluSz|SINE|Alu -164253 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr9-5443 chr9 97569383 97569593 + 10.6 0.000 intron (NM_001166116, intron 8 of 9) L3|LINE|CR1 63880 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr1-6535 chr1 27953569 27953779 + 10.6 0.000 intron (NM_001009568, intron 4 of 6) MIRb|SINE|MIR -5788 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chrX-2106 chrX 25220823 25221033 + 10.6 0.000 Intergenic MLT2B3|LTR|ERVL -204963 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr10-2225 chr10 72171187 72171397 + 10.6 0.000 intron (NM_001369110, intron 5 of 8) MLT1D|LTR|ERVL-MaLR 44664 NM_001369088 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr3-4860 chr3 160791000 160791210 + 10.6 0.000 intron (NM_139245, intron 1 of 3) intron (NM_139245, intron 1 of 3) 34874 NM_139245 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr5-5133 chr5 104088262 104088472 + 10.6 0.000 Intergenic Intergenic -525578 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr1-8534 chr1 157202816 157203026 + 10.6 0.000 Intergenic Intergenic -64330 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr2-4625 chr2 161414332 161414542 + 10.6 0.000 Intergenic CpG -1860 NM_006593 10716 Hs.210862 NM_006593 ENSG00000136535 TBR1 IDDAS|TBR-1|TES-56 T-box brain transcription factor 1 protein-coding chr12-3372 chr12 96347294 96347504 + 10.6 0.000 intron (NM_002595, intron 1 of 16) AluSx|SINE|Alu 53040 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr2-4663 chr2 200060341 200060551 + 10.6 0.000 Intergenic L1PA15|LINE|L1 -104955 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr17-5369 chr17 31074819 31075029 + 10.6 0.000 Intergenic Intergenic -15815 NR_146737 646030 NR_146737 LOC646030 - leucine rich repeat containing 37B pseudogene pseudo chr12-4179 chr12 91523967 91524177 + 10.6 0.000 Intergenic L2a|LINE|L2 -341255 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr1-3679 chr1 157239876 157240086 + 10.6 0.000 Intergenic Intergenic -101390 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr5-1768 chr5 15719063 15719273 + 10.6 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -104166 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr1-7597 chr1 235117401 235117611 + 10.6 0.000 intron (NM_014765, intron 3 of 4) intron (NM_014765, intron 3 of 4) 10431 NR_002956 677802 Hs.744743 NR_002956 ENSG00000207181 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA chr12-1160 chr12 6493303 6493513 + 10.6 0.000 promoter-TSS (NM_016497) promoter-TSS (NM_016497) -146 NM_016497 51258 Hs.55847 NM_016497 ENSG00000111639 MRPL51 CDA09|HSPC241|MRP64|bMRP64 mitochondrial ribosomal protein L51 protein-coding chr10-2577 chr10 71650670 71650880 + 10.6 0.000 intron (NM_022124, intron 13 of 67) intron (NM_022124, intron 13 of 67) 69003 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr1-15795 chr1 176571516 176571726 + 10.6 0.000 intron (NM_021936, intron 2 of 4) intron (NM_021936, intron 2 of 4) 108446 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr20-2888 chr20 62980920 62981130 + 10.6 0.000 Intergenic CpG 25939 NM_080606 128408 Hs.551230 NM_080606 ENSG00000125533 BHLHE23 BETA4|BHLHB4|Beta3b|bA305P22.3 basic helix-loop-helix family member e23 protein-coding chrX-2149 chrX 35398418 35398628 + 10.6 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -399819 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr5-1540 chr5 180353460 180353670 + 10.6 0.000 promoter-TSS (NM_005110) promoter-TSS (NM_005110) -229 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr9-3971 chr9 137078014 137078224 + 10.6 0.000 exon (NM_207309, exon 2 of 9) exon (NM_207309, exon 2 of 9) 602 NM_207309 91373 Hs.142076 NM_207309 ENSG00000197355 UAP1L1 - UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 protein-coding chr8-1223 chr8 115648159 115648369 + 10.6 0.000 intron (NM_014112, intron 1 of 6) CpG 19749 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr12-1950 chr12 110372542 110372752 + 10.6 0.000 TTS (NM_016238) TTS (NM_016238) 31083 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr18-2607 chr18 23828712 23828922 + 10.6 0.000 intron (NM_001127717, intron 23 of 73) L1MEi|LINE|L1 -44203 NM_001127718 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr4-5565 chr4 151163822 151164032 + 10.6 0.000 intron (NM_001128924, intron 1 of 12) intron (NM_001128924, intron 1 of 12) 11625 NM_001128924 152503 Hs.744983 NM_001009555 ENSG00000109686 SH3D19 EBP|EVE1|Eve-1|Kryn|SH3P19 SH3 domain containing 19 protein-coding chr13-1247 chr13 98853877 98854087 + 10.6 0.000 intron (NM_001366682, intron 34 of 53) intron (NM_001366682, intron 34 of 53) 21898 NR_046663 100874096 Hs.578066 NR_046663 ENSG00000229918 DOCK9-AS1 - DOCK9 antisense RNA 1 ncRNA chr11-3623 chr11 72624314 72624524 + 10.6 0.000 intron (NM_001143839, intron 1 of 29) intron (NM_001143839, intron 1 of 29) -9289 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chr1-10570 chr1 174222129 174222339 + 10.6 0.000 intron (NM_001366445, intron 3 of 13) intron (NM_001366445, intron 3 of 13) -52866 NM_001366449 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr15-4650 chr15 64188315 64188525 + 10.6 0.000 exon (NM_001329605, exon 11 of 13) exon (NM_001329605, exon 11 of 13) -25265 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding chr1-8741 chr1 242664564 242664774 + 10.6 0.000 Intergenic LTR80A|LTR|ERVL -139972 NM_001320272 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr3-6751 chr3 140545854 140546064 + 10.6 0.000 intron (NM_022131, intron 9 of 16) intron (NM_022131, intron 9 of 16) -37170 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr1-7918 chr1 158393163 158393373 + 10.6 0.000 Intergenic ERVL-E-int|LTR|ERVL 6198 NM_001004475 128360 Hs.553588 NM_001004475 ENSG00000186306 OR10T2 OR1-3 olfactory receptor family 10 subfamily T member 2 protein-coding chr15-2055 chr15 58221684 58221894 + 10.6 0.000 Intergenic LTR16A|LTR|ERVL 83408 NM_001320635 366 Hs.104624 NM_020980 ENSG00000103569 AQP9 AQP-9|HsT17287|SSC1|T17287 aquaporin 9 protein-coding chr3-10051 chr3 105429296 105429506 + 10.6 0.000 intron (NM_001243280, intron 1 of 14) intron (NM_001243280, intron 1 of 14) 62492 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr12-2234 chr12 58105791 58106001 + 10.6 0.000 Intergenic Intergenic 18004 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chr6-1227 chr6 125104539 125104749 + 10.6 0.000 Intergenic L4_C_Mam|LINE|RTE-X -49129 NM_003287 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr18-822 chr18 7000618 7000828 + 10.6 0.000 intron (NM_005559, intron 30 of 62) intron (NM_005559, intron 30 of 62) 46046 NR_126040 101927188 Hs.680444 NR_126040 ENSG00000265069 LOC101927188 - uncharacterized LOC101927188 ncRNA chr19-1676 chr19 2408565 2408775 + 10.6 0.000 intron (NM_182973, intron 7 of 16) intron (NM_182973, intron 7 of 16) 18899 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr14-2784 chr14 20580887 20581097 + 10.6 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -7232 NR_122043 254028 Hs.652569 NR_122043 ENSG00000258573 LOC254028 - uncharacterized LOC254028 ncRNA chr5-5302 chr5 126441286 126441496 + 10.6 0.000 intron (NR_146196, intron 1 of 14) intron (NR_146196, intron 1 of 14) 17982 NR_146195 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr2-3936 chr2 61469888 61470098 + 10.6 0.000 intron (NM_014709, intron 1 of 79) intron (NM_014709, intron 1 of 79) 1094 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding chr11-3667 chr11 123180400 123180610 + 10.6 0.000 intron (NM_024769, intron 1 of 6) MLT1A0|LTR|ERVL-MaLR 14743 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr3-3026 chr3 113070900 113071110 + 10.6 0.000 Intergenic Intergenic -51334 NM_001319109 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr12-3119 chr12 29691085 29691295 + 10.6 0.000 intron (NM_001367875, intron 5 of 19) LTR8|LTR|ERV1 92752 NM_001193451 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr3-6342 chr3 81950600 81950810 + 10.6 0.000 Intergenic MER4A1|LTR|ERV1 -35437 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr13-2450 chr13 49222895 49223105 + 10.6 0.000 TTS (NM_001507) TTS (NM_001507) 2662 NM_001507 2862 Hs.248126 NM_001507 ENSG00000102539 MLNR GPR38|MTLR1 motilin receptor protein-coding chr16-1351 chr16 85895177 85895387 + 10.6 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -3880 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr5-4065 chr5 56136287 56136497 + 10.6 0.000 intron (NM_024669, intron 7 of 11) L1MC1|LINE|L1 96938 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr11-4440 chr11 95299018 95299228 + 10.6 0.000 Intergenic Intergenic -66648 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr14-1227 chr14 95190404 95190614 + 10.6 0.000 3' UTR (NM_024734, exon 13 of 13) 3' UTR (NM_024734, exon 13 of 13) -32499 NM_001291628 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr4-2097 chr4 41572748 41572958 + 10.6 0.000 intron (NM_001330786, intron 1 of 22) intron (NM_001330786, intron 1 of 22) 34696 NM_001330786 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr7-3388 chr7 121915018 121915228 + 10.6 0.000 intron (NM_001369396, intron 2 of 30) intron (NM_001369396, intron 2 of 30) 41962 NM_001369396 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr4-8343 chr4 147019188 147019398 + 10.6 0.000 Intergenic Intergenic -73407 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr1-5007 chr1 66291132 66291342 + 10.6 0.000 intron (NM_001037340, intron 5 of 14) MIR|SINE|MIR -40871 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr14-3206 chr14 73493816 73494026 + 10.6 0.000 TTS (NM_024644) TTS (NM_024644) 2988 NM_024644 79697 Hs.509916 NM_024644 ENSG00000170468 RIOX1 C14orf169|JMJD9|MAPJD|NO66|ROX|URLC2|hsNO66 ribosomal oxygenase 1 protein-coding chr8-4548 chr8 124895656 124895866 + 10.6 0.000 Intergenic Intergenic -46247 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA chr2-6670 chr2 13006854 13007064 + 10.6 0.000 promoter-TSS (NR_038434) promoter-TSS (NR_038434) 54 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr1-7085 chr1 188706857 188707067 + 10.6 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 1263334 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr10-1191 chr10 96586380 96586590 + 10.6 0.000 intron (NM_020123, intron 1 of 14) CpG 527 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr5-2330 chr5 63127273 63127483 + 10.6 0.000 Intergenic Intergenic 548559 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr3-2960 chr3 66468420 66468630 + 10.6 0.000 intron (NM_015541, intron 1 of 18) intron (NM_015541, intron 1 of 18) 31896 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr14-4284 chr14 18687756 18687966 + 10.6 0.000 Intergenic L1MC4a|LINE|L1 -54227 NR_046104 642426 Hs.578301 NR_046104 ENSG00000257504 LINC02297 - long intergenic non-protein coding RNA 2297 ncRNA chr3-6275 chr3 71775992 71776202 + 10.6 0.000 intron (NM_001126128, intron 2 of 3) Arthur1B|DNA|hAT-Tip100 9051 NM_021935 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr8-2318 chr8 143919536 143919746 + 10.6 0.000 exon (NM_201380, exon 32 of 32) exon (NM_201380, exon 32 of 32) 19956 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr3-6770 chr3 142276670 142276880 + 10.6 0.000 Intergenic Intergenic -51190 NM_001039547 256356 Hs.135904 NM_152776 ENSG00000175066 GK5 - glycerol kinase 5 protein-coding chr1-6903 chr1 146048851 146049061 + 10.6 0.000 Intergenic Intergenic 3288 NR_104085 101954276 NR_104085 ENSG00000201558 RNVU1-6 RNU1-99|vU1.6 RNA, variant U1 small nuclear 6 snRNA chr2-6787 chr2 46778168 46778378 + 10.6 0.000 Intergenic L2c|LINE|L2 -38395 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr17-1663 chr17 75844569 75844779 + 10.6 0.000 promoter-TSS (NM_199242) promoter-TSS (NM_199242) 43 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr12-5178 chr12 104134976 104135186 + 10.6 0.000 intron (NM_006166, intron 2 of 7) intron (NM_006166, intron 2 of 7) 3129 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr10-2639 chr10 90162685 90162895 + 10.6 0.000 Intergenic Intergenic -205417 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr18-2236 chr18 69315682 69315892 + 10.6 0.000 Intergenic Intergenic -85101 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr17-1770 chr17 32928201 32928411 + 10.6 0.000 intron (NM_001033504, intron 1 of 6) CpG 153 NM_015544 26022 Hs.3447 NM_015544 ENSG00000006042 TMEM98 TADA1 transmembrane protein 98 protein-coding chr20-1824 chr20 63600247 63600457 + 10.6 0.000 intron (NM_012384, intron 4 of 9) L1MC4|LINE|L1 -26113 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr1-7090 chr1 192831911 192832121 + 10.6 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 22977 NM_002923 5997 Hs.78944 NM_002923 ENSG00000116741 RGS2 G0S8 regulator of G protein signaling 2 protein-coding chr11-4265 chr11 65741501 65741711 + 10.6 0.000 Intergenic MER66C|LTR|ERV1 -20668 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr17-3822 chr17 42165385 42165595 + 10.6 0.000 exon (NM_012285, exon 11 of 17) exon (NM_012285, exon 11 of 17) -10501 NM_004583 5878 Hs.650382 NM_004583 ENSG00000108774 RAB5C L1880|RAB5CL|RAB5L|RABL RAB5C, member RAS oncogene family protein-coding chr6-4991 chr6 108027468 108027678 + 10.6 0.000 Intergenic Intergenic 47168 NM_014028 28962 Hs.226780 NM_014028 ENSG00000081087 OSTM1 GIPN|GL|HSPC019|OPTB5 osteoclastogenesis associated transmembrane protein 1 protein-coding chr18-1335 chr18 77044914 77045124 + 10.6 0.000 intron (NM_001025100, intron 3 of 3) intron (NM_001025100, intron 3 of 3) -27964 NM_001025090 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding KI270442.1-6 KI270442.1 9635 9845 + 10.6 0.000 NA NA NA NA chr14-3408 chr14 95750781 95750991 + 10.6 0.000 intron (NR_148060, intron 2 of 2) L2b|LINE|L2 35403 NR_148060 107984703 Hs.633538 NR_148060 LOC107984703 - uncharacterized LOC107984703 ncRNA chr17-2360 chr17 68671039 68671249 + 10.6 0.000 intron (NR_110825, intron 2 of 4) intron (NR_110825, intron 2 of 4) 42990 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr1-3695 chr1 183234766 183234976 + 10.6 0.000 intron (NM_005562, intron 15 of 22) intron (NM_005562, intron 15 of 22) 48607 NM_018891 3918 Hs.591484 NM_005562 ENSG00000058085 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin subunit gamma 2 protein-coding chr7-5870 chr7 91915600 91915810 + 10.6 0.000 Intergenic MIRb|SINE|MIR -25157 NM_147185 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr1-4181 chr1 38030080 38030290 + 10.6 0.000 Intergenic UCON80_AMi|Unknown|Unknown 16608 NM_002699 5453 Hs.1837 NM_002699 ENSG00000185668 POU3F1 OCT6|OTF6|SCIP POU class 3 homeobox 1 protein-coding chr13-1249 chr13 99403885 99404095 + 10.6 0.000 Intergenic MSTB|LTR|ERVL-MaLR 47859 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr8-2265 chr8 83120685 83120895 + 10.6 0.000 Intergenic AluSq|SINE|Alu 208686 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr6-2377 chr6 139778975 139779185 + 10.6 0.000 intron (NR_038399, intron 1 of 2) intron (NR_038399, intron 1 of 2) 8007 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chrX-2645 chrX 111663709 111663919 + 10.6 0.000 Intergenic L2c|LINE|L2 -17304 NR_033125 79868 Hs.443061 NM_018466 ENSG00000101901 ALG13 CDG1S|CXorf45|EIEE36|GLT28D1|MDS031|TDRD13|YGL047W ALG13 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr4-7524 chr4 75359920 75360130 + 10.6 0.000 intron (NR_033964, intron 3 of 3) MIR|SINE|MIR 5949 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr1-13082 chr1 181251198 181251408 + 10.6 0.000 Intergenic HERVK11-int|LTR|ERVK 14915 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr7-2472 chr7 1845667 1845877 + 10.6 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) -1519 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr6-3511 chr6 33749230 33749440 + 10.6 0.000 Intergenic Intergenic -2350 NM_001142883 117283 Hs.17253 NM_054111 ENSG00000161896 IP6K3 IHPK3|INSP6K3 inositol hexakisphosphate kinase 3 protein-coding chr3-1455 chr3 48347715 48347925 + 10.6 0.000 Intergenic Intergenic -19479 NM_001080525 646424 Hs.257687 NM_001080525 ENSG00000229453 SPINK8 - serine peptidase inhibitor, Kazal type 8 (putative) protein-coding chr12-5634 chr12 65187361 65187571 + 10.6 0.000 intron (NM_001167614, intron 1 of 12) MIR|SINE|MIR 17883 NM_001167614 23592 Hs.744150 NM_014319 ENSG00000174106 LEMD3 MAN1 LEM domain containing 3 protein-coding chr15-2043 chr15 53942691 53942901 + 10.6 0.000 Intergenic AluSz6|SINE|Alu -35645 NM_001329919 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr2-8533 chr2 131206756 131206966 + 10.6 0.000 Intergenic L1M1|LINE|L1 -11490 NM_001083538 445582 Hs.686146 NM_001004054 ENSG00000188219 POTEE A26C1|A26C1A|CT104.2|POTE-2|POTE2|POTE2gamma POTE ankyrin domain family member E protein-coding chr5-3122 chr5 54961063 54961273 + 10.6 0.000 Intergenic Intergenic 24425 NM_001135604 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr16-2743 chr16 871128 871338 + 10.6 0.000 exon (NM_001352021, exon 7 of 11) exon (NM_001352021, exon 7 of 11) -49800 NR_110946 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr11-5216 chr11 14714599 14714809 + 10.6 0.000 intron (NM_000922, intron 1 of 15) MER3|DNA|hAT-Charlie 70900 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr2-7087 chr2 171711406 171711616 + 10.6 0.000 intron (NM_001271787, intron 4 of 15) intron (NM_001271787, intron 4 of 15) 23756 NM_001271785 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr2-6437 chr2 151716740 151716950 + 10.6 0.000 intron (NM_001271208, intron 10 of 182) intron (NM_001271208, intron 10 of 182) 17631 NM_001271208 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr22-517 chr22 37519324 37519534 + 10.6 0.000 promoter-TSS (NM_014550) promoter-TSS (NM_014550) -14 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr5-7057 chr5 170399186 170399396 + 10.6 0.000 intron (NR_109899, intron 1 of 2) intron (NR_109899, intron 1 of 2) 9798 NR_109899 101928033 Hs.709167 NR_109899 ENSG00000253647 CTD-2270F17.1 - uncharacterized LOC101928033 ncRNA chr21-876 chr21 42766085 42766295 + 10.6 0.000 intron (NM_001001574, intron 13 of 17) AluJr|SINE|Alu 13804 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr7-5860 chr7 90540758 90540968 + 10.6 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -55458 NM_001287135 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr2-7862 chr2 50798461 50798671 + 10.6 0.000 intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) -102304 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA chr11-4839 chr11 16161221 16161431 + 10.6 0.000 intron (NM_033326, intron 6 of 15) (AT)n|Simple_repeat|Simple_repeat -191705 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr16-2038 chr16 48444764 48444974 + 10.6 0.000 Intergenic Intergenic -59456 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr1-15405 chr1 151811100 151811310 + 10.6 0.000 intron (NM_005060, intron 10 of 10) intron (NM_005060, intron 10 of 10) -5763 NM_001004432 339398 Hs.591477 NM_001004432 ENSG00000213171 LINGO4 DAAT9248|LRRN6D|PRO34002 leucine rich repeat and Ig domain containing 4 protein-coding chr1-9876 chr1 67001691 67001901 + 10.6 0.000 3' UTR (NM_015139, exon 12 of 12) 3' UTR (NM_015139, exon 12 of 12) 52352 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr6-8121 chr6 127457515 127457725 + 10.6 0.000 intron (NM_001012279, intron 7 of 11) intron (NM_001012279, intron 7 of 11) 1769 NM_014702 9729 Hs.319247 NM_014702 ENSG00000189367 KIAA0408 - KIAA0408 protein-coding chr2-5146 chr2 26841066 26841276 + 10.6 0.000 Intergenic MIRb|SINE|MIR -6961 NM_020134 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr13-2373 chr13 40152335 40152545 + 10.6 0.000 Intergenic Intergenic -29369 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr9-1784 chr9 136677467 136677677 + 10.6 0.000 intron (NM_006412, intron 1 of 5) intron (NM_006412, intron 1 of 5) 6970 NR_029695 406913 NR_029695 ENSG00000199161 MIR126 MIRN126|miRNA126|mir-126 microRNA 126 ncRNA chr20-1770 chr20 51732579 51732789 + 10.6 0.000 intron (NM_006045, intron 1 of 27) intron (NM_006045, intron 1 of 27) 35706 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr1-15235 chr1 112013396 112013606 + 10.6 0.000 Intergenic Intergenic 22965 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr9-3139 chr9 95931911 95932121 + 10.6 0.000 intron (NM_020207, intron 11 of 18) HAL1|LINE|L1 56008 NM_001010895 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr3-3139 chr3 159799078 159799288 + 10.6 0.000 intron (NM_001197113, intron 5 of 10) intron (NM_001197113, intron 5 of 10) -30571 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr18-1227 chr18 43195829 43196039 + 10.6 0.000 Intergenic Intergenic -80242 NM_001272077 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr7-9691 chr7 153655642 153655852 + 10.6 0.000 Intergenic Intergenic -92386 NM_001364499 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr12-1707 chr12 3218197 3218407 + 10.6 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 140923 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr9-2572 chr9 134929898 134930108 + 10.6 0.000 Intergenic Intergenic -12091 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr5-3120 chr5 54663960 54664170 + 10.6 0.000 intron (NR_104658, intron 2 of 2) intron (NR_104658, intron 2 of 2) 39259 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr12-2576 chr12 113453173 113453383 + 10.6 0.000 Intergenic MER113|DNA|hAT-Charlie 18593 NM_022363 64211 Hs.302029 NM_022363 ENSG00000089116 LHX5 - LIM homeobox 5 protein-coding chr3-1340 chr3 119638032 119638242 + 10.6 0.000 Intergenic Intergenic 22453 NM_001308333 64091 Hs.534383 NM_022135 ENSG00000121577 POPDC2 POP2 popeye domain containing 2 protein-coding chr4-7433 chr4 67094539 67094749 + 10.6 0.000 Intergenic MER5A1|DNA|hAT-Charlie 327356 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr19-4335 chr19 1720298 1720508 + 10.6 0.000 Intergenic L2b|LINE|L2 -33103 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr2-8467 chr2 123807796 123808006 + 10.6 0.000 Intergenic L1PA13|LINE|L1 217273 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA chr16-1608 chr16 70660605 70660815 + 10.6 0.000 TTS (NM_001172771) TTS (NM_001172771) 25343 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chrX-2079 chrX 21479996 21480206 + 10.6 0.000 intron (NM_001168648, intron 5 of 20) LTR41B|LTR|ERVL 105683 NM_001330771 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr5-3356 chr5 137699907 137700117 + 10.6 0.000 intron (NM_017415, intron 3 of 14) intron (NM_017415, intron 3 of 14) 6415 NM_001257195 26249 Hs.655084 NM_017415 ENSG00000146021 KLHL3 PHA2D kelch like family member 3 protein-coding chr11-3096 chr11 28464597 28464807 + 10.6 0.000 Intergenic Intergenic 12846 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr11-3652 chr11 108853914 108854124 + 10.6 0.000 intron (NM_004398, intron 16 of 17) intron (NM_004398, intron 16 of 17) 188950 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr13-3818 chr13 46778907 46779117 + 10.6 0.000 intron (NM_001984, intron 8 of 9) intron (NM_001984, intron 8 of 9) 18149 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr20-3284 chr20 8209069 8209279 + 10.6 0.000 intron (NM_182734, intron 2 of 32) intron (NM_182734, intron 2 of 32) -39530 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr2-8904 chr2 180472192 180472402 + 10.6 0.000 Intergenic Intergenic -219807 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr6-1934 chr6 81788924 81789134 + 10.6 0.000 Intergenic Intergenic 25163 NR_126363 101928770 Hs.586239 NR_126363 ENSG00000224995 LINC01526 Lnc-FAM46A-1 long intergenic non-protein coding RNA 1526 ncRNA chr6-4037 chr6 130461914 130462124 + 10.6 0.000 Intergenic Intergenic 24902 NM_052913 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr11-6134 chr11 40646701 40646911 + 10.6 0.000 intron (NM_020929, intron 2 of 4) AluYk4|SINE|Alu -353676 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr6-8015 chr6 117301969 117302179 + 10.6 0.000 intron (NM_002944, intron 41 of 42) LTR81B|LTR|Gypsy 36516 NM_182645 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr9-2785 chr9 114241891 114242101 + 10.6 0.000 intron (NM_032888, intron 21 of 60) intron (NM_032888, intron 21 of 60) 32562 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr11-5220 chr11 16600084 16600294 + 10.6 0.000 intron (NM_001367872, intron 3 of 16) intron (NM_001367872, intron 3 of 16) -123801 NM_033326 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr11-2938 chr11 72189396 72189606 + 10.6 0.000 promoter-TSS (NM_016725) promoter-TSS (NM_016725) -208 NM_016724 2348 Hs.73769 NM_000802 ENSG00000110195 FOLR1 FBP|FOLR|FRalpha folate receptor alpha protein-coding chrX-2582 chrX 104478549 104478759 + 10.6 0.000 Intergenic Intergenic -87545 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr3-5369 chr3 148453302 148453512 + 10.6 0.000 Intergenic Intergenic 172516 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr4-7555 chr4 78071777 78071987 + 10.6 0.000 intron (NM_001166133, intron 2 of 41) intron (NM_001166133, intron 2 of 41) 14312 NM_001166133 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr10-8749 chr10 103727652 103727862 + 10.6 0.000 intron (NM_014631, intron 4 of 13) intron (NM_014631, intron 4 of 13) -19022 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chrX-2274 chrX 49861600 49861810 + 10.6 0.000 Intergenic Intergenic 17651 NR_026742 158572 Hs.408191 NM_001025449 ENSG00000234390 USP27X-AS1 - USP27X antisense RNA 1 (head to head) ncRNA chr19-6103 chr19 3619283 3619493 + 10.6 0.000 intron (NM_001080543, intron 4 of 9) L2c|LINE|L2 7402 NM_001080543 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr1-7287 chr1 240401797 240402007 + 10.6 0.000 intron (NM_020066, intron 15 of 17) MIRc|SINE|MIR 210253 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr1-10518 chr1 167862820 167863030 + 10.6 0.000 intron (NM_018417, intron 14 of 32) intron (NM_018417, intron 14 of 32) 51209 NM_018417 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr22-2302 chr22 37701888 37702098 + 10.6 0.000 intron (NM_001039141, intron 3 of 23) AluSp|SINE|Alu 4945 NM_001039141 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr6-2565 chr6 43645080 43645290 + 10.6 0.000 exon (NM_152732, exon 1 of 5) exon (NM_152732, exon 1 of 5) 149 NM_152732 221421 Hs.534585 NM_152732 ENSG00000172426 RSPH9 C6orf206|CILD12|MRPS18AL1 radial spoke head 9 homolog protein-coding chr10-4330 chr10 26620570 26620780 + 10.6 0.000 Intergenic MamRTE1|LINE|RTE-BovB -22433 NR_026794 731789 Hs.178186 NR_026794 FAM238B LINC00202-2 family with sequence similarity 238 member B ncRNA chr14-724 chr14 59484470 59484680 + 10.6 0.000 promoter-TSS (NM_001331164) promoter-TSS (NM_001331164) 58 NM_016475 51528 Hs.446850 NM_016475 ENSG00000050130 JKAMP C14orf100|C24orf100|CDA06|HSPC213|HSPC327|JAMP JNK1/MAPK8 associated membrane protein protein-coding chr5-4429 chr5 1538382 1538592 + 10.6 0.000 Intergenic Intergenic -14527 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr2-7385 chr2 6919810 6920020 + 10.6 0.000 intron (NM_001349184, intron 1 of 8) intron (NM_001349184, intron 1 of 8) 1121 NM_001349184 9781 Hs.22146 NM_014746 ENSG00000151692 RNF144A RNF144|UBCE7IP4|hUIP4 ring finger protein 144A protein-coding chr6-4801 chr6 78829153 78829363 + 10.6 0.000 Intergenic Intergenic -38293 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chr3-9060 chr3 25054644 25054854 + 10.6 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 225426 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr5-4535 chr5 16546845 16547055 + 10.6 0.000 intron (NM_001034850, intron 3 of 8) intron (NM_001034850, intron 3 of 8) -37952 NM_019000 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr2-4982 chr2 204109697 204109907 + 10.6 0.000 Intergenic Intergenic 173054 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr8-4892 chr8 74295604 74295814 + 10.6 0.000 intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 25652 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr3-6561 chr3 121725378 121725588 + 10.6 0.000 intron (NM_001256486, intron 5 of 21) MSTC-int|LTR|ERVL-MaLR 24258 NM_001256486 2804 Hs.213389 NM_004487 ENSG00000173230 GOLGB1 GCP|GCP372|GOLIM1 golgin B1 protein-coding chr11-6328 chr11 62323243 62323453 + 10.6 0.000 Intergenic MER58B|DNA|hAT-Charlie -14100 NM_025080 80150 Hs.535326 NM_025080 ENSG00000162174 ASRGL1 ALP|ALP1|CRASH asparaginase like 1 protein-coding chr11-2676 chr11 66600761 66600971 + 10.6 0.000 intron (NM_005125, intron 5 of 7) intron (NM_005125, intron 5 of 7) 7681 NM_005125 9973 Hs.502917 NM_005125 ENSG00000173992 CCS - copper chaperone for superoxide dismutase protein-coding chr2-5059 chr2 5282172 5282382 + 10.6 0.000 Intergenic L1MA9|LINE|L1 408841 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr4-8201 chr4 134601354 134601564 + 10.6 0.000 Intergenic L1M2b|LINE|L1 177591 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr10-8462 chr10 87544940 87545150 + 10.6 0.000 intron (NM_001178118, intron 4 of 4) intron (NM_001178118, intron 4 of 4) 37212 NM_001178118 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding chr3-5267 chr3 114274921 114275131 + 10.6 0.000 Intergenic L1M1|LINE|L1 -19002 NM_173799 201633 Hs.421750 NM_173799 ENSG00000181847 TIGIT VSIG9|VSTM3|WUCAM T cell immunoreceptor with Ig and ITIM domains protein-coding chr1-8839 chr1 3161288 3161498 + 10.6 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 33418 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr8-1691 chr8 76678101 76678311 + 10.6 0.000 intron (NR_024360, intron 1 of 3) (CGCGCCC)n|Simple_repeat|Simple_repeat -3041 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr8-4256 chr8 92535390 92535600 + 10.6 0.000 Intergenic Intergenic 119999 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr6-6599 chr6 145335647 145335857 + 10.6 0.000 Intergenic L2a|LINE|L2 351125 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr4-5028 chr4 140515428 140515638 + 10.6 0.000 Intergenic Intergenic -8635 NM_153702 255520 Hs.450105 NM_153702 ENSG00000179387 ELMOD2 9830169G11Rik ELMO domain containing 2 protein-coding chr20-1815 chr20 62881806 62882016 + 10.6 0.000 TTS (NR_145839) TTS (NR_145839) 992 NR_145839 109623463 NR_145839 SNORA117 - small nucleolar RNA, H/ACA box 117 snoRNA chr1-12642 chr1 42370991 42371201 + 10.6 0.000 Intergenic Intergenic -9696 NM_173642 284716 Hs.420244 NM_173642 ENSG00000177181 RIMKLA FAM80A|NAAGS|NAAGS-II ribosomal modification protein rimK like family member A protein-coding chr19-3172 chr19 41352426 41352636 + 10.6 0.000 intron (NM_000660, intron 1 of 6) intron (NM_000660, intron 1 of 6) 1391 NM_000660 7040 Hs.645227 NM_000660 ENSG00000105329 TGFB1 CED|DPD1|IBDIMDE|LAP|TGFB|TGFbeta transforming growth factor beta 1 protein-coding chr1-5229 chr1 198177592 198177802 + 10.6 0.000 intron (NM_133494, intron 1 of 9) L1M6|LINE|L1 20699 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr3-4971 chr3 13326824 13327034 + 10.6 0.000 intron (NM_024923, intron 32 of 39) MER58A|DNA|hAT-Charlie 93393 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr3-10801 chr3 160223964 160224174 + 10.6 0.000 Intergenic Intergenic -1567 NM_001168214 401097 Hs.729755 NM_001168214 ENSG00000180044 C3orf80 - chromosome 3 open reading frame 80 protein-coding chr15-3104 chr15 64717294 64717504 + 10.6 0.000 Intergenic Intergenic -14118 NM_002537 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr22-1361 chr22 29043868 29044078 + 10.6 0.000 intron (NM_001206998, intron 4 of 8) intron (NM_001206998, intron 4 of 8) -12497 NR_046851 100874123 Hs.674708 NR_046851 ENSG00000177993 ZNRF3-AS1 - ZNRF3 antisense RNA 1 ncRNA chr2-9965 chr2 7730317 7730527 + 10.6 0.000 Intergenic Intergenic 169233 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr10-5148 chr10 52354335 52354545 + 10.6 0.000 Intergenic Intergenic 40159 NM_012242 22943 Hs.40499 NM_012242 ENSG00000107984 DKK1 DKK-1|SK dickkopf WNT signaling pathway inhibitor 1 protein-coding chr6-4686 chr6 54238486 54238696 + 10.6 0.000 intron (NM_138569, intron 11 of 12) intron (NM_138569, intron 11 of 12) -69850 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr9-5088 chr9 34567639 34567849 + 10.6 0.000 promoter-TSS (NR_024369) promoter-TSS (NR_024369) -268 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr1-2961 chr1 110390961 110391171 + 10.6 0.000 promoter-TSS (NM_001201547) promoter-TSS (NM_001201547) 16 NM_001201547 9122 Hs.351306 NM_004696 ENSG00000168679 SLC16A4 MCT4|MCT5 solute carrier family 16 member 4 protein-coding chr17-1728 chr17 75827671 75827881 + 10.6 0.000 3' UTR (NM_199242, exon 32 of 32) 3' UTR (NM_199242, exon 32 of 32) 16941 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr18-1762 chr18 9712670 9712880 + 10.6 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 4474 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr3-3993 chr3 57534112 57534322 + 10.6 0.000 intron (NM_198564, intron 2 of 11) L1M1|LINE|L1 10127 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr10-5052 chr10 37137459 37137669 + 10.6 0.000 intron (NM_052997, intron 6 of 35) L1P1|LINE|L1 11707 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr4-4029 chr4 2160084 2160294 + 10.6 0.000 intron (NM_181808, intron 13 of 25) L1ME3|LINE|L1 81932 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chrX-2090 chrX 22595008 22595218 + 10.6 0.000 intron (NR_073010, intron 4 of 11) intron (NR_073010, intron 4 of 11) 322200 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr17-4941 chr17 77650108 77650318 + 10.6 0.000 Intergenic LTR22C0|LTR|ERVK 78346 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chrX-2300 chrX 53323179 53323389 + 10.6 0.000 Intergenic Intergenic -1934 NM_001111125 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr12-1150 chr12 124554458 124554668 + 10.6 0.000 intron (NM_001077261, intron 1 of 47) intron (NM_001077261, intron 1 of 47) 13049 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr13-3734 chr13 41179581 41179791 + 10.6 0.000 intron (NR_120423, intron 3 of 3) L1MB7|LINE|L1 14883 NM_032138 84078 Hs.63841 NM_032138 ENSG00000120696 KBTBD7 - kelch repeat and BTB domain containing 7 protein-coding chr10-2385 chr10 108544528 108544738 + 10.6 0.000 Intergenic LTR13|LTR|ERVK -475340 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr4-8254 chr4 139822659 139822869 + 10.6 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 156945 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr11-8503 chr11 121914646 121914856 + 10.6 0.000 Intergenic Intergenic 185093 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr5-8405 chr5 126689711 126689921 + 10.6 0.000 Intergenic Intergenic 58111 NM_207408 389320 Hs.177983 NM_207408 ENSG00000196900 TEX43 C5orf48|Tseg7 testis expressed 43 protein-coding chr3-4381 chr3 190426941 190427151 + 10.6 0.000 Intergenic LTR88b|LTR|Gypsy? 22830 NM_207316 131920 Hs.335321 NM_207316 ENSG00000198398 TMEM207 UNQ846 transmembrane protein 207 protein-coding chr2-6766 chr2 43868423 43868633 + 10.6 0.000 intron (NM_001357321, intron 6 of 12) intron (NM_001357321, intron 6 of 12) 29557 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr3-1721 chr3 99638420 99638630 + 10.6 0.000 promoter-TSS (NM_020351) promoter-TSS (NM_020351) -69 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr5-4522 chr5 14566636 14566846 + 10.6 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -15051 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 OTULINL FAM105A|NET20 OTU deubiquitinase with linear linkage specificity like protein-coding chr2-10825 chr2 54290956 54291166 + 10.6 0.000 intron (NM_001320589, intron 4 of 4) L2|LINE|L2 -34832 NM_001003937 388951 Hs.620508 NM_001003937 ENSG00000178021 TSPYL6 - TSPY like 6 protein-coding chr9-4565 chr9 88889854 88890064 + 10.6 0.000 Intergenic L1MA9|LINE|L1 -100904 NM_001001938 286223 Hs.585118 NM_001001938 ENSG00000213694 C9orf47 C9orf108|bA791O21.3 chromosome 9 open reading frame 47 protein-coding chr21-1235 chr21 45672687 45672897 + 10.6 0.000 intron (NM_001348238, intron 2 of 16) MLT1J2-int|LTR|ERVL-MaLR 3918 NM_001348242 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr1-10664 chr1 183762116 183762326 + 10.6 0.000 intron (NM_001297669, intron 3 of 18) Tigger1|DNA|TcMar-Tigger -42899 NM_001297671 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr15-1948 chr15 27826519 27826729 + 10.6 0.000 intron (NM_001300984, intron 22 of 22) intron (NM_001300984, intron 22 of 22) 272691 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr5-8444 chr5 129110733 129110943 + 10.6 0.000 intron (NM_016048, intron 4 of 4) intron (NM_016048, intron 4 of 4) 13150 NR_039776 100616175 NR_039776 ENSG00000264563 MIR4633 - microRNA 4633 ncRNA chr10-2543 chr10 61140901 61141111 + 10.6 0.000 Intergenic Intergenic 124731 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr17-6119 chr17 81206638 81206848 + 10.6 0.000 intron (NM_001319228, intron 5 of 25) intron (NM_001319228, intron 5 of 25) 16222 NM_001009811 22994 Hs.514578 NM_014984 ENSG00000141577 CEP131 AZ1|AZI1|ZA1 centrosomal protein 131 protein-coding chr17-5154 chr17 8716969 8717179 + 10.6 0.000 Intergenic LTR12C|LTR|ERV1 27762 NM_144681 146849 Hs.121438 NM_144681 ENSG00000161973 CCDC42 CCDC42A coiled-coil domain containing 42 protein-coding chr18-1206 chr18 33251660 33251870 + 10.6 0.000 intron (NM_001308126, intron 14 of 23) Arthur1C|DNA|hAT-Tip100 188806 NM_001371121 chr2-9108 chr2 205848963 205849173 + 10.6 0.000 Intergenic Intergenic 166567 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr11-4504 chr11 115194558 115194768 + 10.6 0.000 intron (NM_001301045, intron 8 of 10) GA-rich|Low_complexity|Low_complexity -138914 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr4-767 chr4 76689411 76689621 + 10.6 0.000 intron (NM_020859, intron 2 of 10) CpG 113965 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr21-554 chr21 43375005 43375215 + 10.6 0.000 Intergenic Intergenic -12761 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr8-1551 chr8 117850028 117850238 + 10.6 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 70780 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr21-565 chr21 45033033 45033243 + 10.6 0.000 Intergenic Intergenic -28411 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr4-1380 chr4 100933817 100934027 + 10.6 0.000 Intergenic Intergenic -258809 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr1-5360 chr1 236099874 236100084 + 10.6 0.000 Intergenic Intergenic -34889 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr15-2775 chr15 33580906 33581116 + 10.6 0.000 intron (NM_001243996, intron 13 of 102) intron (NM_001243996, intron 13 of 102) 270044 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr3-4072 chr3 97927732 97927942 + 10.6 0.000 intron (NM_153605, intron 17 of 21) L1PA15|LINE|L1 44594 NM_153182 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr1-2730 chr1 10944535 10944745 + 10.6 0.000 Intergenic Intergenic 22047 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr17-4542 chr17 78115341 78115551 + 10.6 0.000 intron (NM_001321185, intron 18 of 19) intron (NM_001321185, intron 18 of 19) -3647 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr3-5411 chr3 161894636 161894846 + 10.6 0.000 Intergenic Intergenic 397933 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr22-790 chr22 49755107 49755317 + 10.6 0.000 Intergenic Intergenic 69119 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr17-3328 chr17 70848908 70849118 + 10.6 0.000 Intergenic Intergenic 353166 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr2-4135 chr2 166374109 166374319 + 10.6 0.000 intron (NM_001365536, intron 1 of 26) intron (NM_001365536, intron 1 of 26) 1730 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr1-4590 chr1 112614649 112614859 + 10.6 0.000 intron (NM_017744, intron 2 of 14) AluJb|SINE|Alu 4387 NM_138727 54879 Hs.201921 NM_017744 ENSG00000007341 ST7L FAM4B|ST7R|STLR suppression of tumorigenicity 7 like protein-coding chr6-4563 chr6 42350299 42350509 + 10.6 0.000 intron (NM_001297573, intron 3 of 17) intron (NM_001297573, intron 3 of 17) 101647 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr4-4964 chr4 129929157 129929367 + 10.6 0.000 intron (NR_151713, intron 13 of 16) Tigger7|DNA|TcMar-Tigger 157643 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr7-3152 chr7 73567961 73568171 + 10.6 0.000 3' UTR (NM_001362660, exon 8 of 8) 3' UTR (NM_001362660, exon 8 of 8) 10321 NM_001362663 26608 Hs.647044 NM_012453 ENSG00000106638 TBL2 WBSCR13|WS-betaTRP transducin beta like 2 protein-coding chr8-2277 chr8 100069098 100069308 + 10.6 0.000 intron (NM_001286693, intron 4 of 25) intron (NM_001286693, intron 4 of 25) 36423 NM_001286693 26166 Hs.120021 NM_015668 ENSG00000132554 RGS22 CT145|PRTD-NY2 regulator of G protein signaling 22 protein-coding chr8-2748 chr8 107737454 107737664 + 10.6 0.000 Intergenic Intergenic -239641 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr14-1083 chr14 31208107 31208317 + 10.6 0.000 promoter-TSS (NM_015382) promoter-TSS (NM_015382) -419 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr12-4454 chr12 13128689 13128899 + 10.6 0.000 Intergenic Intergenic -25127 NM_001367361 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr12-3533 chr12 132530395 132530605 + 10.6 0.000 intron (NM_001142641, intron 4 of 16) intron (NM_001142641, intron 4 of 16) 40349 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr17-4084 chr17 79695944 79696154 + 10.6 0.000 Intergenic Intergenic 11200 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr2-5184 chr2 33772374 33772584 + 10.6 0.000 intron (NR_126403, intron 1 of 5) MER53|DNA|hAT -44262 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr8-4064 chr8 64750673 64750883 + 10.6 0.000 intron (NM_004820, intron 1 of 5) intron (NM_004820, intron 1 of 5) 47959 NM_001324112 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr5-3345 chr5 135748024 135748234 + 10.6 0.000 intron (NM_001349335, intron 3 of 10) MIR|SINE|MIR 54946 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr12-6704 chr12 4735830 4736040 + 10.6 0.000 intron (NM_017417, intron 2 of 10) L1M4b|LINE|L1 15535 NM_017417 26290 Hs.511985 NM_017417 ENSG00000130035 GALNT8 GALNAC-T8 polypeptide N-acetylgalactosaminyltransferase 8 protein-coding chr1-3556 chr1 235337010 235337220 + 10.6 0.000 intron (NM_001037277, intron 2 of 3) intron (NM_001037277, intron 2 of 3) 8545 NR_036605 9453 Hs.730768 NM_004837 ENSG00000152904 GGPS1 GGPPS|GGPPS1 geranylgeranyl diphosphate synthase 1 protein-coding chr5-4883 chr5 66744225 66744435 + 10.6 0.000 intron (NM_001290228, intron 1 of 4) intron (NM_001290228, intron 1 of 4) -84443 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr19-3467 chr19 33473878 33474088 + 10.6 0.000 intron (NM_001166057, intron 5 of 12) intron (NM_001166057, intron 5 of 12) 47808 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr5-7352 chr5 17997878 17998088 + 10.6 0.000 Intergenic L1MA7|LINE|L1 190709 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr18-2662 chr18 49752455 49752665 + 10.6 0.000 Intergenic Intergenic 60973 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr12-1580 chr12 124259313 124259523 + 10.6 0.000 intron (NM_001347902, intron 3 of 4) L1MC4|LINE|L1 -29746 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr18-1035 chr18 2027143 2027353 + 10.6 0.000 Intergenic Intergenic 544257 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr3-5341 chr3 134866225 134866435 + 10.6 0.000 intron (NM_004441, intron 1 of 15) intron (NM_004441, intron 1 of 15) 71070 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr21-1008 chr21 16605803 16606013 + 10.6 0.000 intron (NR_136549, intron 3 of 3) intron (NR_136549, intron 3 of 3) 15671 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr4-5191 chr4 159486735 159486945 + 10.6 0.000 Intergenic Intergenic 219031 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr1-3239 chr1 197799365 197799575 + 10.6 0.000 Intergenic L1PA15|LINE|L1 -23990 NM_144977 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr17-3982 chr17 66190797 66191007 + 10.6 0.000 intron (NM_001353129, intron 1 of 26) intron (NM_001353129, intron 1 of 26) 990 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr6-4897 chr6 93210725 93210935 + 10.6 0.000 Intergenic Intergenic 208729 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr8-6855 chr8 99928204 99928414 + 10.6 0.000 Intergenic Intergenic -34602 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr20-2323 chr20 9410009 9410219 + 10.6 0.000 intron (NM_000933, intron 20 of 35) intron (NM_000933, intron 20 of 35) 102314 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr5-2374 chr5 84255479 84255689 + 10.6 0.000 intron (NM_001278642, intron 1 of 9) MLT1H-int|LTR|ERVL-MaLR 129283 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr5-4377 chr5 173995765 173995975 + 10.6 0.000 intron (NM_001144954, intron 1 of 4) intron (NM_001144954, intron 1 of 4) 6700 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chrX-1216 chrX 74450045 74450255 + 10.6 0.000 intron (NM_006517, intron 1 of 5) MamRep1879|DNA|hAT-Tip100? 28657 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr12-4600 chr12 34343481 34343691 + 10.6 0.000 Intergenic Intergenic 321090 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr1-9080 chr1 15916498 15916708 + 10.6 0.000 intron (NM_015001, intron 6 of 14) AluJb|SINE|Alu 59529 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr19-1873 chr19 19365013 19365223 + 10.6 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -20685 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chrX-1786 chrX 79131496 79131706 + 10.6 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -39371 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr9-3251 chr9 15622597 15622807 + 10.6 0.000 intron (NM_001355547, intron 5 of 24) intron (NM_001355547, intron 5 of 24) 58724 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr7-2866 chr7 114016467 114016677 + 10.6 0.000 Intergenic L2a|LINE|L2 -69755 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr7-5884 chr7 93510364 93510574 + 10.6 0.000 intron (NM_001164737, intron 2 of 15) intron (NM_001164737, intron 2 of 15) -26450 NR_030164 574442 NR_030164 ENSG00000207656 MIR489 MIRN489|hsa-mir-489|mir-489 microRNA 489 ncRNA chr6-4437 chr6 33959383 33959593 + 10.6 0.000 Intergenic Intergenic 40563 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr7-9362 chr7 129786141 129786351 + 10.6 0.000 Intergenic Intergenic -11232 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr2-2832 chr2 105294924 105295134 + 10.6 0.000 intron (NM_001142621, intron 4 of 11) intron (NM_001142621, intron 4 of 11) 34627 NR_137328 9392 Hs.446350 NM_004257 ENSG00000135966 TGFBRAP1 TRAP-1|TRAP1|VPS3 transforming growth factor beta receptor associated protein 1 protein-coding chr6-6221 chr6 17885934 17886144 + 10.6 0.000 intron (NM_001105567, intron 3 of 36) intron (NM_001105567, intron 3 of 36) 101596 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr2-4873 chr2 109537992 109538202 + 10.6 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 75570 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr16-2645 chr16 27313491 27313701 + 10.6 0.000 promoter-TSS (NM_001257406) promoter-TSS (NM_001257406) -378 NM_001257407 3566 Hs.513457 NM_000418 ENSG00000077238 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding chrX-275 chrX 46573466 46573676 + 10.6 0.000 promoter-TSS (NM_019886) promoter-TSS (NM_019886) -194 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chrX-4662 chrX 81127148 81127358 + 10.6 0.000 intron (NM_030763, intron 1 of 6) intron (NM_030763, intron 1 of 6) 74660 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr22-1768 chr22 28173153 28173363 + 10.6 0.000 intron (NM_001145418, intron 5 of 22) intron (NM_001145418, intron 5 of 22) -252646 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr4-1591 chr4 22191031 22191241 + 10.6 0.000 Intergenic LTR1B1|LTR|ERV1 148530 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr17-6885 chr17 31314307 31314517 + 10.6 0.000 promoter-TSS (NM_006495) promoter-TSS (NM_006495) -358 NM_006495 2124 Hs.5509 NM_006495 ENSG00000185862 EVI2B CD361|D17S376|EVDB ecotropic viral integration site 2B protein-coding chr20-2907 chr20 63638523 63638733 + 10.6 0.000 Intergenic Intergenic 11393 NR_132418 100505771 Hs.448392 NR_132417 ENSG00000232442 MHENCR - melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 ncRNA chr22-2602 chr22 31285243 31285453 + 10.6 0.000 intron (NM_001135911, intron 4 of 4) intron (NM_001135911, intron 4 of 4) 7140 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr11-6529 chr11 69293394 69293604 + 10.6 0.000 promoter-TSS (NM_001293296) promoter-TSS (NM_001293296) -656 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr3-3419 chr3 102092632 102092842 + 10.6 0.000 Intergenic Intergenic -70968 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chrX-686 chrX 26909706 26909916 + 10.6 0.000 Intergenic Intergenic 351474 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr10-5094 chr10 47113179 47113389 + 10.6 0.000 Intergenic AluSx|SINE|Alu -186913 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr10-3787 chr10 127021229 127021439 + 10.6 0.000 intron (NM_001290223, intron 13 of 51) AluSx|SINE|Alu 115925 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr5-4650 chr5 35938693 35938903 + 10.6 0.000 promoter-TSS (NM_144647) promoter-TSS (NM_144647) -3 NR_104630 100506406 Hs.116864 NR_104630 ENSG00000249748 LOC100506406 - uncharacterized LOC100506406 ncRNA chr13-4148 chr13 85066558 85066768 + 10.6 0.000 intron (NR_126383, intron 5 of 5) intron (NR_126383, intron 5 of 5) 81394 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr18-2064 chr18 48021388 48021598 + 10.6 0.000 Intergenic MIRb|SINE|MIR -90347 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr11-3074 chr11 13877928 13878138 + 10.6 0.000 Intergenic MIRb|SINE|MIR -7417 NR_149109 105376561 Hs.512244 NR_149109 ENSG00000254930 LINC02545 - long intergenic non-protein coding RNA 2545 ncRNA chr10-3313 chr10 3126116 3126326 + 10.6 0.000 intron (NM_001242339, intron 18 of 23) intron (NM_001242339, intron 18 of 23) -7883 NR_132758 106633806 NR_132758 SNORD142 SNORA85|SNORD174|ZL68 small nucleolar RNA, C/D box 142 snoRNA chr4-4700 chr4 87511274 87511484 + 10.6 0.000 intron (NM_001128310, intron 1 of 11) L2c|LINE|L2 18124 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr1-10321 chr1 151945694 151945904 + 10.6 0.000 Intergenic Intergenic -36288 NM_053055 117145 Hs.164070 NM_053055 ENSG00000159445 THEM4 CTMP thioesterase superfamily member 4 protein-coding chr2-4101 chr2 148100059 148100269 + 10.6 0.000 intron (NM_018328, intron 2 of 14) L2c|LINE|L2 -78560 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr12-4333 chr12 711239 711449 + 10.6 0.000 Intergenic L1MA4|LINE|L1 -41235 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr2-7367 chr2 2615155 2615365 + 10.6 0.000 Intergenic AluSq2|SINE|Alu -283985 NM_001329851 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr12-1727 chr12 32535353 32535563 + 10.6 0.000 intron (NM_001304480, intron 1 of 16) intron (NM_001304480, intron 1 of 16) 1165 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr11-4874 chr11 37065119 37065329 + 10.6 0.000 Intergenic Intergenic -466945 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr12-4987 chr12 78058078 78058288 + 10.6 0.000 intron (NM_001024383, intron 11 of 39) THE1B|LTR|ERVL-MaLR 227289 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr13-3386 chr13 86548740 86548950 + 10.6 0.000 Intergenic MER34B-int|LTR|ERV1 -363075 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr4-1944 chr4 110289152 110289362 + 10.6 0.000 Intergenic Intergenic -90642 NM_001130721 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr9-4138 chr9 136311543 136311753 + 10.6 0.000 Intergenic Intergenic -4747 NM_001291516 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr16-2353 chr16 53434411 53434621 + 10.6 0.000 promoter-TSS (NM_005611) promoter-TSS (NM_005611) 45 NM_001323608 5934 Hs.513609 NM_005611 ENSG00000103479 RBL2 P130|Rb2 RB transcriptional corepressor like 2 protein-coding chr5-4502 chr5 11084753 11084963 + 10.6 0.000 intron (NM_001364128, intron 12 of 19) intron (NM_001364128, intron 12 of 19) -323624 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr21-1174 chr21 42481826 42482036 + 10.6 0.000 intron (NM_080860, intron 6 of 8) intron (NM_080860, intron 6 of 8) 14293 NM_001286506 89765 Hs.661069 NM_080860 ENSG00000160188 RSPH1 CT79|RSP44|RSPH10A|TSA2|TSGA2 radial spoke head component 1 protein-coding chr4-1602 chr4 38189991 38190201 + 10.6 0.000 Intergenic Intergenic 70142 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr17-3532 chr17 72465091 72465301 + 10.6 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 122385 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr5-5715 chr5 168072015 168072225 + 10.6 0.000 intron (NM_001368145, intron 6 of 26) intron (NM_001368145, intron 6 of 26) -93725 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr3-2532 chr3 43583006 43583216 + 10.6 0.000 intron (NM_001204833, intron 2 of 10) intron (NM_001204833, intron 2 of 10) 38815 NM_001346466 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr17-2338 chr17 60044313 60044523 + 10.6 0.000 intron (NM_022070, intron 19 of 19) MER91A|DNA|hAT-Tip100 -1313 NR_039890 100616210 NR_039890 ENSG00000264049 MIR4737 - microRNA 4737 ncRNA chr3-5860 chr3 34149865 34150075 + 10.6 0.000 Intergenic Intergenic 351340 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr11-6160 chr11 44165227 44165437 + 10.6 0.000 intron (NM_001178083, intron 8 of 14) intron (NM_001178083, intron 8 of 14) 69135 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr15-1092 chr15 60836118 60836328 + 10.6 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 154654 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr15-3366 chr15 84878631 84878841 + 10.6 0.000 Intergenic Intergenic -5925 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr7-3550 chr7 13198122 13198332 + 10.6 0.000 Intergenic MER65D|LTR|ERV1 510594 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr11-8088 chr11 37223908 37224118 + 10.6 0.000 Intergenic MER52A|LTR|ERV1 -625734 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr2-7355 chr2 1752450 1752660 + 10.6 0.000 Intergenic Intergenic -8040 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr3-3914 chr3 48221062 48221272 + 10.6 0.000 Intergenic Intergenic -2328 NM_004345 820 Hs.51120 NM_004345 ENSG00000164047 CAMP CAP-18|CAP18|CRAMP|FALL-39|FALL39|HSD26|LL37 cathelicidin antimicrobial peptide protein-coding chr3-1624 chr3 52681933 52682143 + 10.6 0.000 intron (NM_001366073, intron 1 of 29) intron (NM_001366073, intron 1 of 29) 3561 NM_001350074 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding chr9-4903 chr9 7118242 7118452 + 10.6 0.000 intron (NR_148679, intron 19 of 22) intron (NR_148679, intron 19 of 22) 360997 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr1-6577 chr1 33948932 33949142 + 10.6 0.000 intron (NM_052896, intron 3 of 69) MIR|SINE|MIR 80081 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr6-4983 chr6 107591475 107591685 + 10.6 0.000 intron (NM_018013, intron 5 of 6) intron (NM_018013, intron 5 of 6) 101463 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr8-3077 chr8 22560017 22560227 + 10.6 0.000 intron (NM_005775, intron 5 of 20) intron (NM_005775, intron 5 of 20) -5607 NM_001018003 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr4-7058 chr4 29881693 29881903 + 10.6 0.000 Intergenic L2a|LINE|L2 667506 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr8-4457 chr8 115751559 115751769 + 10.6 0.000 Intergenic Intergenic -82689 NM_014112 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr3-5239 chr3 101042966 101043176 + 10.6 0.000 Intergenic L2b|LINE|L2 -49581 NM_001349330 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr22-2057 chr22 45630940 45631150 + 10.6 0.000 Intergenic AluSp|SINE|Alu -25398 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr7-1653 chr7 66047500 66047710 + 10.6 0.000 Intergenic L2c|LINE|L2 -28214 NM_001024944 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr4-4675 chr4 85304861 85305071 + 10.6 0.000 Intergenic Intergenic -170184 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr7-3268 chr7 13880303 13880513 + 10.6 0.000 Intergenic Intergenic 106106 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr4-4295 chr4 26575929 26576139 + 10.6 0.000 Intergenic MIRc|SINE|MIR -7890 NM_001292054 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr4-2146 chr4 79913702 79913912 + 10.6 0.000 intron (NM_001286781, intron 16 of 16) intron (NM_001286781, intron 16 of 16) 86336 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr7-2741 chr7 44273832 44274042 + 10.6 0.000 intron (NM_172081, intron 2 of 18) intron (NM_172081, intron 2 of 18) 51657 NM_172084 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr15-4348 chr15 40731527 40731737 + 10.6 0.000 3' UTR (NM_002875, exon 10 of 10) 3' UTR (NM_002875, exon 10 of 10) 23622 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chr17-5581 chr17 47179117 47179327 + 10.6 0.000 intron (NM_001256, intron 2 of 18) intron (NM_001256, intron 2 of 18) 10073 NR_148340 996 Hs.463295 NM_001256 ENSG00000004897 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding chr8-1646 chr8 133161961 133162171 + 10.6 0.000 Intergenic L2b|LINE|L2 -28973 NR_037944 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr5-6527 chr5 6118361 6118571 + 10.6 0.000 Intergenic Intergenic 218826 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr5-8800 chr5 149528197 149528407 + 10.6 0.000 intron (NM_001271742, intron 1 of 9) intron (NM_001271742, intron 1 of 9) 22063 NM_001271742 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding chr3-1709 chr3 50616090 50616300 + 10.6 0.000 promoter-TSS (NM_001243925) promoter-TSS (NM_001243925) -936 NM_004635 7867 Hs.234521 NM_004635 ENSG00000114738 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3 MAPK activated protein kinase 3 protein-coding chr7-5857 chr7 90004214 90004424 + 10.6 0.000 intron (NR_110029, intron 2 of 2) intron (NR_110029, intron 2 of 2) -115081 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr2-6730 chr2 30874210 30874420 + 10.6 0.000 Intergenic L1MEf|LINE|L1 -66869 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr2-9069 chr2 201923315 201923525 + 10.6 0.000 Intergenic Intergenic -111167 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr16-6106 chr16 13357894 13358104 + 10.6 0.000 Intergenic LTR7|LTR|ERV1 456401 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chrX-5261 chrX 138742234 138742444 + 10.6 0.000 intron (NM_001139498, intron 2 of 5) intron (NM_001139498, intron 2 of 5) -2986 NM_033642 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr10-3111 chr10 29926809 29927019 + 10.6 0.000 Intergenic Intergenic 132672 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr6-4615 chr6 45845719 45845929 + 10.6 0.000 Intergenic Intergenic 91773 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr15-4274 chr15 35965964 35966174 + 10.6 0.000 Intergenic Intergenic 39213 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr11-10288 chr11 105277436 105277646 + 10.6 0.000 Intergenic MamGypLTR3|LTR|Gypsy -137772 NM_021571 59082 Hs.56279 NM_021571 ENSG00000255501 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family member 18 protein-coding chr2-12924 chr2 101127708 101127918 + 10.6 0.000 intron (NM_001102426, intron 1 of 19) intron (NM_001102426, intron 1 of 19) 23634 NR_138475 11138 Hs.442657 NM_007063 ENSG00000204634 TBC1D8 AD3|GRAMD8|HBLP1|TBC1D8A|VRP TBC1 domain family member 8 protein-coding chr5-4292 chr5 150043800 150044010 + 10.6 0.000 intron (NM_014983, intron 15 of 19) intron (NM_014983, intron 15 of 19) 42735 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chrX-4659 chrX 81001033 81001243 + 10.6 0.000 Intergenic Intergenic -191261 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr2-14532 chr2 229648197 229648407 + 10.6 0.000 intron (NM_139072, intron 1 of 12) L2b|LINE|L2 66253 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr3-4061 chr3 79651620 79651830 + 10.6 0.000 intron (NM_002941, intron 1 of 30) intron (NM_002941, intron 1 of 30) 116273 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr20-2879 chr20 62864172 62864382 + 10.6 0.000 Intergenic AluSc8|SINE|Alu -2455 NM_006602 10732 Hs.126248 NM_006602 ENSG00000101190 TCFL5 CHA|E2BP-1|Figlb|SOSF1|bHLHe82 transcription factor like 5 protein-coding chr11-3633 chr11 75787477 75787687 + 10.6 0.000 intron (NM_032564, intron 2 of 7) intron (NM_032564, intron 2 of 7) 18804 NM_032564 84649 Hs.129798 NM_032564 ENSG00000062282 DGAT2 ARAT|GS1999FULL|HMFN1045 diacylglycerol O-acyltransferase 2 protein-coding chr6-3497 chr6 18822945 18823155 + 10.6 0.000 Intergenic L1MA3|LINE|L1 251266 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr9-3701 chr9 108474018 108474228 + 10.6 0.000 Intergenic Intergenic 381863 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr12-3215 chr12 55927172 55927382 + 10.6 0.000 promoter-TSS (NM_001143853) promoter-TSS (NM_001143853) -152 NM_001143853 84305 Hs.505687 NM_032345 ENSG00000170473 PYM1 PYM|WIBG PYM homolog 1, exon junction complex associated factor protein-coding chr11-5263 chr11 33383020 33383230 + 10.6 0.000 intron (NM_012194, intron 1 of 20) MamRTE1|LINE|RTE-BovB 7017 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr11-5025 chr11 81408932 81409142 + 10.6 0.000 Intergenic L1PA7|LINE|L1 481799 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr3-2016 chr3 45968815 45969025 + 10.6 0.000 intron (NM_024513, intron 7 of 17) intron (NM_024513, intron 7 of 17) 25456 NM_006564 10663 Hs.34526 NM_006564 ENSG00000172215 CXCR6 BONZO|CD186|STRL33|TYMSTR C-X-C motif chemokine receptor 6 protein-coding chr5-4809 chr5 58619072 58619282 + 10.6 0.000 intron (NM_138453, intron 2 of 4) intron (NM_138453, intron 2 of 4) 36102 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr1-10070 chr1 93093674 93093884 + 10.6 0.000 intron (NM_001164393, intron 1 of 12) FAM|SINE|Alu 14496 NM_007358 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr5-4744 chr5 51045803 51046013 + 10.6 0.000 Intergenic Intergenic -75721 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chr21-660 chr21 40833070 40833280 + 10.6 0.000 intron (NR_073202, intron 1 of 32) intron (NR_073202, intron 1 of 32) 13983 NR_073202 1826 Hs.160418 NM_001389 ENSG00000171587 DSCAM CHD2|CHD2-42|CHD2-52 DS cell adhesion molecule protein-coding chr10-3063 chr10 467923 468133 + 10.6 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -160536 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr11-4199 chr11 62075520 62075730 + 10.6 0.000 Intergenic Intergenic -48386 NM_020238 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr3-8650 chr3 176942302 176942512 + 10.6 0.000 Intergenic Intergenic -125406 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr10-8759 chr10 104215667 104215877 + 10.6 0.000 intron (NM_025145, intron 3 of 37) L2b|LINE|L2 3111 NR_030340 693194 NR_030340 ENSG00000208033 MIR609 MIRN609|hsa-mir-609 microRNA 609 ncRNA chrX-1624 chrX 116668444 116668654 + 10.6 0.000 Intergenic HUERS-P2-int|LTR|ERV1 149311 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr8-2508 chr8 19754662 19754872 + 10.6 0.000 intron (NM_001354488, intron 1 of 9) intron (NM_001354488, intron 1 of 9) 2316 NM_001354490 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr14-2555 chr14 28353012 28353222 + 10.6 0.000 Intergenic Intergenic 412202 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr4-5204 chr4 163740254 163740464 + 10.6 0.000 intron (NM_001166373, intron 3 of 7) LTR40b|LTR|ERVL -126825 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr15-2809 chr15 38189694 38189904 + 10.6 0.000 Intergenic L2a|LINE|L2 -63037 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr12-4341 chr12 1540392 1540602 + 10.6 0.000 Intergenic Intergenic -8305 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr14-913 chr14 75295080 75295290 + 10.6 0.000 intron (NR_038421, intron 2 of 2) intron (NR_038421, intron 2 of 2) 781 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr1-7644 chr1 6430221 6430431 + 10.6 0.000 promoter-TSS (NR_036218) promoter-TSS (NR_036218) -430 NR_036218 100422975 NR_036218 ENSG00000265392 MIR4252 - microRNA 4252 ncRNA chr1-4611 chr1 154774783 154774993 + 10.6 0.000 intron (NM_170782, intron 2 of 7) intron (NM_170782, intron 2 of 7) 84988 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chrX-1654 chrX 140649401 140649611 + 10.6 0.000 Intergenic L1MB7|LINE|L1 -60253 NR_028344 286411 Hs.317627 NR_028344 ENSG00000203930 LINC00632 ASINC long intergenic non-protein coding RNA 632 ncRNA chr9-3118 chr9 77291779 77291989 + 10.6 0.000 intron (NM_001018038, intron 31 of 68) L1MCc|LINE|L1 -113967 NR_026668 100286938 Hs.662256 NR_026668 ENSG00000232998 VPS13A-AS1 - VPS13A antisense RNA 1 ncRNA chr19-6950 chr19 47382156 47382366 + 10.6 0.000 3' UTR (NM_014681, exon 17 of 17) 3' UTR (NM_014681, exon 17 of 17) 32946 NM_014681 9704 Hs.151706 NM_014681 ENSG00000134815 DHX34 DDX34|HRH1 DExH-box helicase 34 protein-coding chr6-4657 chr6 50418828 50419038 + 10.6 0.000 Intergenic L2c|LINE|L2 -294611 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr7-5639 chr7 54727042 54727252 + 10.6 0.000 Intergenic Intergenic 32064 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr8-4466 chr8 116641126 116641336 + 10.6 0.000 TTS (NM_003756) TTS (NM_003756) -10869 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr10-2168 chr10 124517563 124517773 + 10.6 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) 55845 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr9-3595 chr9 83066885 83067095 + 10.6 0.000 Intergenic Intergenic -3848 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr11-3035 chr11 2324524 2324734 + 10.6 0.000 Intergenic THE1C|LTR|ERVL-MaLR -21489 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr10-1269 chr10 728937 729147 + 10.6 0.000 Intergenic Intergenic -39374 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr17-2076 chr17 77132657 77132867 + 10.6 0.000 intron (NM_001204410, intron 2 of 17) intron (NM_001204410, intron 2 of 17) -8207 NM_003003 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr2-8402 chr2 115118000 115118210 + 10.6 0.000 intron (NM_001178037, intron 1 of 25) L2|LINE|L2 43238 NR_036580 389023 Hs.97540 NR_036580 ENSG00000235026 DPP10-AS1 - DPP10 antisense RNA 1 ncRNA chr10-3037 chr10 120107828 120108038 + 10.6 0.000 Intergenic LTR24C|LTR|ERV1 149420 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr14-3276 chr14 80969455 80969665 + 10.6 0.000 intron (NM_001142626, intron 1 of 8) ERVL-E-int|LTR|ERVL 13939 NM_001142626 7253 Hs.160411 NM_000369 ENSG00000165409 TSHR CHNG1|LGR3|hTSHR-I thyroid stimulating hormone receptor protein-coding chrX-4854 chrX 104551178 104551388 + 10.6 0.000 Intergenic Intergenic -14916 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr10-3186 chr10 89475130 89475340 + 10.6 0.000 intron (NM_213606, intron 2 of 7) intron (NM_213606, intron 2 of 7) 19244 NR_120614 101926906 Hs.568874 NR_120614 ENSG00000234452 SLC16A12-AS1 - SLC16A12 antisense RNA 1 ncRNA chr1-9409 chr1 31901291 31901501 + 10.6 0.000 Intergenic Intergenic 36422 NM_001369858 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr14-1376 chr14 31207425 31207635 + 10.6 0.000 5' UTR (NM_015382, exon 1 of 43) 5' UTR (NM_015382, exon 1 of 43) 263 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr3-9281 chr3 42099822 42100032 + 10.6 0.000 intron (NM_001349247, intron 1 of 16) intron (NM_001349247, intron 1 of 16) 8570 NM_001265608 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chrX-2260 chrX 48026115 48026325 + 10.6 0.000 Intergenic Intergenic 18479 NM_001079900 729201 Hs.319319 NM_001079900 ENSG00000171478 SPACA5B LYZL5B sperm acrosome associated 5B protein-coding chr6-4265 chr6 10305860 10306070 + 10.6 0.000 Intergenic Intergenic -98537 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr18-1763 chr18 9754018 9754228 + 10.6 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 45822 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr16-3548 chr16 49545801 49546011 + 10.6 0.000 intron (NM_001271620, intron 5 of 7) MIR|SINE|MIR -27321 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr3-9015 chr3 20521647 20521857 + 10.6 0.000 Intergenic L1PB1|LINE|L1 179284 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr10-2375 chr10 100168531 100168741 + 10.6 0.000 intron (NR_144757, intron 5 of 10) intron (NR_144757, intron 5 of 10) 17393 NM_001347860 10613 Hs.150087 NM_006459 ENSG00000107566 ERLIN1 C10orf69|Erlin-1|KE04|KEO4|SPFH1|SPG62 ER lipid raft associated 1 protein-coding chr7-2708 chr7 28106621 28106831 + 10.6 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -73731 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr1-6821 chr1 95204733 95204943 + 10.6 0.000 intron (NR_125948, intron 3 of 4) L2a|LINE|L2 29144 NR_125949 101928118 Hs.656443 NR_125948 ENSG00000226026 LOC101928118 - uncharacterized LOC101928118 ncRNA chr7-3042 chr7 112132322 112132532 + 10.6 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 73972 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr1-7964 chr1 193325255 193325465 + 10.6 0.000 intron (NR_125789, intron 1 of 3) intron (NR_125789, intron 1 of 3) 20615 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr8-3065 chr8 17720047 17720257 + 10.6 0.000 intron (NM_001363062, intron 3 of 13) AluSz|SINE|Alu 2069 NM_001001931 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr7-3564 chr7 20030435 20030645 + 10.6 0.000 intron (NR_110114, intron 2 of 5) L1ME3G|LINE|L1 109886 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr12-5139 chr12 99746909 99747119 + 10.6 0.000 intron (NM_152788, intron 8 of 25) intron (NM_152788, intron 8 of 25) 99261 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr12-2574 chr12 113124238 113124448 + 10.6 0.000 intron (NM_004658, intron 5 of 21) intron (NM_004658, intron 5 of 21) 11256 NM_001301202 8437 Hs.528693 NM_004658 ENSG00000111344 RASAL1 RASAL RAS protein activator like 1 protein-coding chr3-3832 chr3 28655633 28655843 + 10.6 0.000 intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 80460 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr9-7027 chr9 120550979 120551189 + 10.6 0.000 intron (NR_073558, intron 3 of 37) L1MC4|LINE|L1 29083 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr11-5179 chr11 7757557 7757767 + 10.6 0.000 Intergenic LTR33|LTR|ERVL 39280 NM_153444 120065 Hs.351824 NM_153444 ENSG00000183303 OR5P2 JCG3|JCG4 olfactory receptor family 5 subfamily P member 2 protein-coding chr20-1860 chr20 33229804 33230014 + 10.6 0.000 Intergenic MIR|SINE|MIR -6087 NM_130852 51297 Hs.211092 NM_016583 ENSG00000198183 BPIFA1 LUNX|NASG|PLUNC|SPLUNC1|SPURT|bA49G10.5 BPI fold containing family A member 1 protein-coding chr5-4968 chr5 78811194 78811404 + 10.6 0.000 intron (NM_000046, intron 6 of 7) intron (NM_000046, intron 6 of 7) -162527 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr7-6195 chr7 129882565 129882775 + 10.6 0.000 intron (NM_001202498, intron 1 of 6) intron (NM_001202498, intron 1 of 6) 70290 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr7-2035 chr7 80681263 80681473 + 10.6 0.000 Intergenic Intergenic 34715 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr7-4782 chr7 79912148 79912358 + 10.6 0.000 Intergenic LTR108e_Mam|LTR|ERVL -222578 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr7-5408 chr7 34599965 34600175 + 10.6 0.000 intron (NR_033664, intron 2 of 4) MER119|DNA|hAT-Charlie -58148 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr18-2166 chr18 58264823 58265033 + 10.6 0.000 intron (NM_001144965, intron 5 of 30) intron (NM_001144965, intron 5 of 30) 43357 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr15-3606 chr15 64706057 64706267 + 10.6 0.000 Intergenic L2|LINE|L2 -2881 NM_002537 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr8-2881 chr8 141239597 141239807 + 10.6 0.000 intron (NM_001286646, intron 1 of 7) intron (NM_001286646, intron 1 of 7) -11128 NM_001080431 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr9-4439 chr9 17578408 17578618 + 10.6 0.000 promoter-TSS (NM_003026) promoter-TSS (NM_003026) -553 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr11-6240 chr11 48559477 48559687 + 10.6 0.000 Intergenic L1MEf|LINE|L1 70789 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding chr19-4207 chr19 46052964 46053174 + 10.6 0.000 intron (NR_163177, intron 2 of 5) intron (NR_163177, intron 2 of 5) -12053 NM_001002923 444882 Hs.531310 NM_001002923 ENSG00000204869 IGFL4 - IGF like family member 4 protein-coding chr3-3872 chr3 38542412 38542622 + 10.6 0.000 Intergenic Intergenic 46177 NR_134938 9941 Hs.517897 NM_005107 ENSG00000157036 EXOG ENDOGL1|ENDOGL2|ENGL|ENGL-a|ENGL-b|ENGLA|ENGLB exo/endonuclease G protein-coding chr17-5599 chr17 48155723 48155933 + 10.6 0.000 TTS (NR_031607) TTS (NR_031607) 683 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr16-4697 chr16 81454806 81455016 + 10.6 0.000 intron (NM_198390, intron 1 of 20) L2c|LINE|L2 9741 NM_198390 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding chr6-5908 chr6 47790323 47790533 + 10.6 0.000 intron (NR_033806, intron 1 of 6) (CT)n|Simple_repeat|Simple_repeat 3360 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr10-5916 chr10 119582118 119582328 + 10.6 0.000 exon (NM_001033925, exon 4 of 12) exon (NM_001033925, exon 4 of 12) 14806 NM_001323967 7073 Hs.501203 NM_003252 ENSG00000151923 TIAL1 TCBP|TIAR TIA1 cytotoxic granule associated RNA binding protein like 1 protein-coding chr21-1717 chr21 32601085 32601295 + 10.6 0.000 TTS (NM_001350335) TTS (NM_001350335) 11187 NM_001350337 56683 Hs.5811 NM_017835 ENSG00000159079 CFAP298 C21orf48|C21orf59|CILD26|FBB18|Kur cilia and flagella associated protein 298 protein-coding chrX-1144 chrX 37980672 37980882 + 10.6 0.000 Intergenic L1M4b|LINE|L1 -10002 NM_012274 25763 Hs.122959 NM_012274 ENSG00000187516 HYPM CXorf27|HIP17 huntingtin interacting protein M protein-coding chr12-5030 chr12 85426120 85426330 + 10.6 0.000 Intergenic Intergenic 146005 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr5-1956 chr5 66597125 66597335 + 10.6 0.000 intron (NM_001290228, intron 1 of 4) CpG 837 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chrX-1513 chrX 14496988 14497198 + 10.6 0.000 Intergenic Intergenic -32205 NM_001171942 2742 Hs.2700 NM_002063 ENSG00000101958 GLRA2 GLR glycine receptor alpha 2 protein-coding chr8-4259 chr8 92989321 92989531 + 10.6 0.000 Intergenic MER1A|DNA|hAT-Charlie -23282 NM_001171795 286144 Hs.440643 NM_001171795 ENSG00000205133 TRIQK C8orf83|PRO0845|UPF0599 triple QxxK/R motif containing protein-coding chr18-1792 chr18 11922943 11923153 + 10.6 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -14731 NM_023075 65258 Hs.712666 NM_023075 ENSG00000154889 MPPE1 PGAP5 metallophosphoesterase 1 protein-coding chr10-5113 chr10 49265102 49265312 + 10.6 0.000 Intergenic Intergenic 33686 NR_108038 100506769 Hs.562293 NR_108038 C10orf71-AS1 - C10orf71 antisense RNA 1 ncRNA chr1-4629 chr1 165856408 165856618 + 10.6 0.000 intron (NM_012474, intron 1 of 6) intron (NM_012474, intron 1 of 6) 28899 NM_001363568 7371 Hs.458360 NM_012474 ENSG00000143179 UCK2 TSA903|UK|UMPK uridine-cytidine kinase 2 protein-coding chr7-3709 chr7 55382832 55383042 + 10.6 0.000 intron (NM_018697, intron 1 of 8) LTR8|LTR|ERV1 17489 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr1-7428 chr1 43505675 43505885 + 10.6 0.000 Intergenic Intergenic -20257 NM_001329138 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr14-3511 chr14 103235644 103235854 + 10.6 0.000 Intergenic HERVK9-int|LTR|ERVK -46721 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr3-5563 chr3 4809928 4810138 + 10.6 0.000 intron (NM_001168272, intron 54 of 60) intron (NM_001168272, intron 54 of 60) -58443 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr11-9285 chr11 44991725 44991935 + 10.6 0.000 Intergenic Intergenic 17928 NR_026681 221122 Hs.551656 NR_026681 ENSG00000254654 LINC02685 - long intergenic non-protein coding RNA 2685 ncRNA chr11-9549 chr11 64558068 64558278 + 10.6 0.000 intron (NM_001307985, intron 1 of 7) AluJo|SINE|Alu 2232 NM_001307985 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr16-1855 chr16 75087151 75087361 + 10.6 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 29516 NM_194436 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr8-1351 chr8 101155379 101155589 + 10.6 0.000 Intergenic Intergenic 50189 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr3-5082 chr3 45573600 45573810 + 10.6 0.000 Intergenic MER21C|LTR|ERVL -21046 NM_014240 8994 Hs.193370 NM_014240 ENSG00000144791 LIMD1 - LIM domains containing 1 protein-coding chr6-5366 chr6 150393748 150393958 + 10.6 0.000 intron (NM_001318495, intron 3 of 4) intron (NM_001318495, intron 3 of 4) 24841 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr2-8757 chr2 162414374 162414584 + 10.6 0.000 intron (NM_033272, intron 9 of 15) intron (NM_033272, intron 9 of 15) 70111 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr15-510 chr15 64355512 64355722 + 10.6 0.000 intron (NM_001329606, intron 1 of 11) intron (NM_001329606, intron 1 of 11) 556 NM_001329607 53944 Hs.646508 NM_022048 ENSG00000169118 CSNK1G1 CK1gamma1 casein kinase 1 gamma 1 protein-coding chr12-2629 chr12 131804175 131804385 + 10.6 0.000 Intergenic Intergenic -24113 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr16-4286 chr16 26986411 26986621 + 10.6 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -80411 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr10-4489 chr10 80651422 80651632 + 10.6 0.000 intron (NR_155749, intron 1 of 2) intron (NR_155749, intron 1 of 2) 1730 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr10-2317 chr10 48463663 48463873 + 10.6 0.000 intron (NR_144644, intron 3 of 8) intron (NR_144644, intron 3 of 8) 29882 NM_001256026 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr5-4344 chr5 165189414 165189624 + 10.6 0.000 Intergenic Intergenic 719240 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr20-1646 chr20 22691813 22692023 + 10.6 0.000 Intergenic Intergenic -6574 NR_146528 105372566 Hs.555065 NR_146527 LINC01747 - long intergenic non-protein coding RNA 1747 ncRNA chr1-7925 chr1 162666081 162666291 + 10.6 0.000 intron (NM_006182, intron 2 of 17) intron (NM_006182, intron 2 of 17) 33722 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr2-6710 chr2 26663819 26664029 + 10.6 0.000 Intergenic L1MC2|LINE|L1 -22558 NM_001029881 130106 Hs.591579 NM_001029881 ENSG00000157884 CIB4 KIP4 calcium and integrin binding family member 4 protein-coding chr3-3031 chr3 115580752 115580962 + 10.6 0.000 Intergenic Intergenic -42653 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr15-2823 chr15 39300850 39301060 + 10.6 0.000 Intergenic Intergenic 50286 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr8-2010 chr8 100017996 100018206 + 10.6 0.000 intron (NM_015668, intron 14 of 27) intron (NM_015668, intron 14 of 27) 13519 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr2-7828 chr2 46590878 46591088 + 10.6 0.000 intron (NM_173074, intron 5 of 6) intron (NM_173074, intron 5 of 6) -10745 NR_104182 100506142 Hs.658541 NR_104182 ENSG00000250116 LOC100506142 - uncharacterized LOC100506142 ncRNA chrX-1946 chrX 5185899 5186109 + 10.6 0.000 Intergenic Intergenic -552432 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr11-3845 chr11 71339053 71339263 + 10.6 0.000 Intergenic Intergenic 84196 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr10-5618 chr10 94647188 94647398 + 10.6 0.000 Intergenic Intergenic -36436 NM_000772 1562 Hs.511872 NM_000772 ENSG00000108242 CYP2C18 CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 cytochrome P450 family 2 subfamily C member 18 protein-coding chr2-4248 chr2 221284113 221284323 + 10.6 0.000 Intergenic Intergenic 288086 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr15-5038 chr15 83907537 83907747 + 10.6 0.000 intron (NM_207517, intron 15 of 29) AluSz|SINE|Alu -172545 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr13-1548 chr13 29969388 29969598 + 10.6 0.000 Intergenic Intergenic 32962 NR_033889 440131 Hs.132371 NM_001010918 LINC00544 - long intergenic non-protein coding RNA 544 ncRNA chr16-5699 chr16 79431761 79431971 + 10.6 0.000 Intergenic Intergenic 168871 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr16-2830 chr16 74106488 74106698 + 10.6 0.000 Intergenic Intergenic 108928 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr13-624 chr13 45377412 45377622 + 10.6 0.000 intron (NR_024458, intron 5 of 10) intron (NR_024458, intron 5 of 10) 36172 NR_024458 100190939 Hs.375766 NR_024458 TPT1-AS1 - TPT1 antisense RNA 1 ncRNA chr8-2224 chr8 22790840 22791050 + 10.6 0.000 intron (NM_001363233, intron 4 of 6) intron (NM_001363233, intron 4 of 6) -87027 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr2-5071 chr2 9440149 9440359 + 10.6 0.000 intron (NM_016207, intron 7 of 17) intron (NM_016207, intron 7 of 17) 16600 NM_016207 51692 Hs.515972 NM_016207 ENSG00000119203 CPSF3 CPSF-73|CPSF73 cleavage and polyadenylation specific factor 3 protein-coding chr16-6791 chr16 78249972 78250182 + 10.6 0.000 intron (NM_001291997, intron 4 of 7) MIRb|SINE|MIR 150423 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr3-10061 chr3 107100177 107100387 + 10.6 0.000 Intergenic Intergenic 140356 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr2-4917 chr2 152632965 152633175 + 10.6 0.000 intron (NM_052905, intron 21 of 25) L2c|LINE|L2 84391 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chrX-1830 chrX 102957885 102958095 + 10.6 0.000 intron (NR_146589, intron 10 of 11) L1PA15|LINE|L1 20718 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr7-7149 chr7 4340783 4340993 + 10.6 0.000 Intergenic AluSx1|SINE|Alu -206051 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr6-5111 chr6 120026336 120026546 + 10.6 0.000 Intergenic Intergenic 11262 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr6-2888 chr6 10205420 10205630 + 10.6 0.000 Intergenic Arthur1A|DNA|hAT-Tip100 -198977 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr4-1957 chr4 133095563 133095773 + 10.6 0.000 non-coding (NR_125885, exon 9 of 9) non-coding (NR_125885, exon 9 of 9) 53448 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA chr16-4711 chr16 82235301 82235511 + 10.6 0.000 Intergenic LTR16A|LTR|ERVL -65182 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr7-3790 chr7 90624072 90624282 + 10.6 0.000 intron (NM_001287135, intron 2 of 14) MIRc|SINE|MIR 27856 NM_001287135 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr11-5651 chr11 124770401 124770611 + 10.6 0.000 intron (NM_001312921, intron 3 of 3) AluJr|SINE|Alu 5736 NM_001312920 79684 Hs.146079 NM_024631 ENSG00000120458 MSANTD2 C11orf61 Myb/SANT DNA binding domain containing 2 protein-coding chr17-5576 chr17 46914723 46914933 + 10.6 0.000 Intergenic L2c|LINE|L2 -8289 NM_001353115 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr19-1838 chr19 7522455 7522665 + 10.6 0.000 promoter-TSS (NM_020533) promoter-TSS (NM_020533) -64 NM_020533 57192 Hs.631858 NM_020533 ENSG00000090674 MCOLN1 MG-2|ML1|ML4|MLIV|MST080|MSTP080|TRP-ML1|TRPM-L1|TRPML1 mucolipin 1 protein-coding chr17-5176 chr17 11099975 11100185 + 10.6 0.000 Intergenic Intergenic -141133 NM_001173462 388336 Hs.592124 NM_175903 ENSG00000188803 SHISA6 - shisa family member 6 protein-coding chr10-3131 chr10 51770118 51770328 + 10.6 0.000 intron (NM_001098512, intron 3 of 17) intron (NM_001098512, intron 3 of 17) -70628 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr11-1673 chr11 16110277 16110487 + 10.6 0.000 intron (NM_033326, intron 7 of 15) intron (NM_033326, intron 7 of 15) -140761 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr7-3689 chr7 50292997 50293207 + 10.6 0.000 Intergenic Intergenic -10962 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr19-2080 chr19 41308526 41308736 + 10.6 0.000 TTS (NM_001301016) TTS (NM_001301016) -1541 NM_052848 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr3-3691 chr3 160477886 160478096 + 10.6 0.000 intron (NR_148403, intron 1 of 20) MamGypLTR3|LTR|Gypsy 7756 NR_148403 100174949 NR_148401 ENSG00000248710 TRIM59-IFT80 IFT80-L TRIM59-IFT80 protein ncRNA chr14-4717 chr14 59674174 59674384 + 10.6 0.000 intron (NM_021136, intron 3 of 8) intron (NM_021136, intron 3 of 8) -27259 NR_049851 100847088 NR_049851 ENSG00000263629 MIR5586 - microRNA 5586 ncRNA chr3-5283 chr3 122784491 122784701 + 10.6 0.000 intron (NM_001320728, intron 1 of 6) intron (NM_001320728, intron 1 of 6) 9235 NM_001320728 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr21-434 chr21 45412997 45413207 + 10.6 0.000 intron (NM_130445, intron 2 of 42) intron (NM_130445, intron 2 of 42) -3037 NR_052004 100874236 Hs.589901 NR_052004 ENSG00000224574 COL18A1-AS2 - COL18A1 antisense RNA 2 ncRNA chr6-5054 chr6 113597095 113597305 + 10.6 0.000 Intergenic Intergenic 52875 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chr18-1468 chr18 57806806 57807016 + 10.6 0.000 Intergenic Intergenic -3596 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr2-7105 chr2 177595474 177595684 + 10.6 0.000 Intergenic Intergenic 23163 NM_152275 92104 Hs.128384 NM_152275 ENSG00000197557 TTC30A IFT70A|TTC30B tetratricopeptide repeat domain 30A protein-coding chr21-519 chr21 35933517 35933727 + 10.6 0.000 Intergenic Intergenic 47177 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr1-13768 chr1 16932433 16932643 + 10.6 0.000 intron (NM_014675, intron 8 of 36) L2c|LINE|L2 10607 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr13-1466 chr13 80444948 80445158 + 10.6 0.000 Intergenic Intergenic -103927 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr10-4331 chr10 27201025 27201235 + 10.6 0.000 intron (NM_001271512, intron 11 of 11) AluJr|SINE|Alu 39356 NM_001301252 91452 Hs.530597 NM_145698 ENSG00000107897 ACBD5 - acyl-CoA binding domain containing 5 protein-coding chr14-3395 chr14 95334359 95334569 + 10.6 0.000 non-coding (NR_110127, exon 3 of 3) non-coding (NR_110127, exon 3 of 3) 4880 NR_110127 101929080 Hs.525567 NR_110127 ENSG00000258630 LINC02292 - long intergenic non-protein coding RNA 2292 ncRNA chr12-2818 chr12 118034923 118035133 + 10.6 0.000 exon (NM_018639, exon 8 of 9) exon (NM_018639, exon 8 of 9) 18325 NM_007370 5985 Hs.731908 NM_007370 ENSG00000111445 RFC5 RFC36 replication factor C subunit 5 protein-coding chr3-2748 chr3 138081923 138082133 + 10.6 0.000 intron (NM_001170538, intron 9 of 13) intron (NM_001170538, intron 9 of 13) 31452 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr19-4749 chr19 28961397 28961607 + 10.6 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -3629 NR_027318 148145 Hs.112651 NR_027318 ENSG00000267339 LINC00906 - long intergenic non-protein coding RNA 906 ncRNA chr17-5589 chr17 47665715 47665925 + 10.6 0.000 intron (NM_002265, intron 9 of 21) intron (NM_002265, intron 9 of 21) 14755 NM_001276453 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr20-1227 chr20 31512206 31512416 + 10.6 0.000 Intergenic AluY|SINE|Alu -2099 NM_178580 81502 Hs.373741 NM_030789 ENSG00000101294 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 histocompatibility minor 13 protein-coding chr11-4452 chr11 98063566 98063776 + 10.6 0.000 Intergenic MSTB|LTR|ERVL-MaLR -957278 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr10-1783 chr10 76382657 76382867 + 10.6 0.000 intron (NM_001305581, intron 6 of 6) intron (NM_001305581, intron 6 of 6) -505282 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chrX-3073 chrX 117534919 117535129 + 10.6 0.000 Intergenic L1MEc|LINE|L1 438714 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr17-2973 chr17 65565239 65565449 + 10.6 0.000 Intergenic Intergenic -3696 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr9-5619 chr9 117953449 117953659 + 10.6 0.000 Intergenic L2c|LINE|L2 249151 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr6-6954 chr6 17226240 17226450 + 10.6 0.000 Intergenic L3|LINE|CR1 -55016 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr17-5855 chr17 67649432 67649642 + 10.6 0.000 intron (NM_181671, intron 6 of 9) MER21C|LTR|ERVL -68296 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr15-949 chr15 34514383 34514593 + 10.6 0.000 Intergenic CpG 13883 NR_036261 100422845 NR_036261 ENSG00000221065 MIR1233-2 - microRNA 1233-2 ncRNA chr3-2887 chr3 48065047 48065257 + 10.6 0.000 intron (NM_002375, intron 1 of 18) intron (NM_002375, intron 1 of 18) 23696 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr1-4996 chr1 62919460 62919670 + 10.6 0.000 Intergenic Intergenic 91360 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr2-2174 chr2 10304130 10304340 + 10.6 0.000 intron (NM_134421, intron 1 of 5) CpG 535 NM_134421 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr1-10647 chr1 181744049 181744259 + 10.6 0.000 intron (NM_001205293, intron 25 of 47) intron (NM_001205293, intron 25 of 47) 260637 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr5-5435 chr5 137822277 137822487 + 10.6 0.000 Intergenic Intergenic 21189 NR_002713 4888 Hs.643466 NR_002713 ENSG00000226306 NPY6R NPY1RL|NPY6RP|PP2|Y2B neuropeptide Y receptor Y6 (pseudogene) pseudo chr1-3481 chr1 59186676 59186886 + 10.6 0.000 Intergenic Intergenic -39974 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr9-4916 chr9 10318309 10318519 + 10.6 0.000 intron (NM_002839, intron 3 of 45) intron (NM_002839, intron 3 of 45) 294588 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr19-1429 chr19 2363531 2363741 + 10.6 0.000 Intergenic Intergenic -26135 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr11-1696 chr11 66301016 66301226 + 10.6 0.000 Intergenic AluY|SINE|Alu 9227 NM_153266 256472 Hs.399779 NM_153266 ENSG00000179292 TMEM151A TMEM151 transmembrane protein 151A protein-coding chr6-1445 chr6 160041787 160041997 + 10.6 0.000 intron (NM_000876, intron 11 of 47) intron (NM_000876, intron 11 of 47) -34228 NR_047511 100271873 Hs.742166 NR_047511 ENSG00000268257 AIRN AIR|IGF2R-AS|IGF2R-AS1|IGF2RAS|NCRNA00088 antisense of IGF2R non-protein coding RNA ncRNA chr1-8880 chr1 4795689 4795899 + 10.6 0.000 Intergenic Intergenic 141185 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr11-3890 chr11 104853083 104853293 + 10.6 0.000 Intergenic Intergenic 45482 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr15-1921 chr15 83901577 83901787 + 10.6 0.000 intron (NM_207517, intron 15 of 29) intron (NM_207517, intron 15 of 29) -178505 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr4-2047 chr4 8545004 8545214 + 10.6 0.000 Intergenic Intergenic -35128 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr12-1540 chr12 93138116 93138326 + 10.6 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -36145 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chrX-172 chrX 24025388 24025598 + 10.6 0.000 intron (NM_030624, intron 1 of 3) CpG-29535 1693 NM_030624 80311 Hs.495854 NM_030624 ENSG00000174010 KLHL15 HEL-S-305 kelch like family member 15 protein-coding chr2-7465 chr2 14907228 14907438 + 10.6 0.000 Intergenic Intergenic 274616 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr3-2196 chr3 12193561 12193771 + 10.6 0.000 Intergenic Intergenic -34754 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr5-4816 chr5 59448239 59448449 + 10.6 0.000 intron (NM_001349242, intron 1 of 16) intron (NM_001349242, intron 1 of 16) -91374 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr6-4521 chr6 38094004 38094214 + 10.6 0.000 intron (NM_021943, intron 4 of 5) intron (NM_021943, intron 4 of 5) 274382 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr6-2312 chr6 111201239 111201449 + 10.6 0.000 intron (NM_018593, intron 3 of 5) intron (NM_018593, intron 3 of 5) -57995 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr17-3922 chr17 57823920 57824130 + 10.6 0.000 Intergenic MER91C|DNA|hAT-Tip100 26019 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr7-3854 chr7 101739517 101739727 + 10.6 0.000 Intergenic Intergenic -76385 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr10-8581 chr10 95967819 95968029 + 10.6 0.000 intron (NM_001349008, intron 14 of 34) intron (NM_001349008, intron 14 of 34) -32167 NM_001159747 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr9-5172 chr9 68489737 68489947 + 10.6 0.000 intron (NM_021965, intron 9 of 10) intron (NM_021965, intron 9 of 10) 51025 NM_153237 169693 Hs.663056 NM_153237 ENSG00000181778 TMEM252 C9orf71 transmembrane protein 252 protein-coding chr5-2834 chr5 55446787 55446997 + 10.6 0.000 intron (NR_103485, intron 4 of 6) intron (NR_103485, intron 4 of 6) 62034 NR_049869 100847019 NR_049869 ENSG00000265135 MIR5687 - microRNA 5687 ncRNA chr21-1605 chr21 16898592 16898802 + 10.6 0.000 Intergenic THE1C|LTR|ERVL-MaLR 308460 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr9-4582 chr9 93815548 93815758 + 10.6 0.000 Intergenic Intergenic -3704 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA chr6-3762 chr6 14639885 14640095 + 10.6 0.000 Intergenic Intergenic -354536 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr6-4299 chr6 14551012 14551222 + 10.6 0.000 Intergenic Intergenic -265663 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr3-5045 chr3 37906468 37906678 + 10.6 0.000 intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) 44693 NM_005808 10217 Hs.475963 NM_005808 ENSG00000144677 CTDSPL C3orf8|HYA22|PSR1|RBSP3|SCP3 CTD small phosphatase like protein-coding chr12-3065 chr12 6951198 6951408 + 10.6 0.000 promoter-TSS (NM_080549) promoter-TSS (NM_080549) 32 NM_080549 5777 Hs.63489 NM_002831 ENSG00000111679 PTPN6 HCP|HCPH|HPTP1C|PTP-1C|SH-PTP1|SHP-1|SHP-1L|SHP1 protein tyrosine phosphatase non-receptor type 6 protein-coding chr19-2774 chr19 44692055 44692265 + 10.6 0.000 Intergenic Intergenic -6991 NM_001039213 388551 Hs.456381 NM_001039213 ENSG00000213892 CEACAM16 CEAL2|DFNA4B|DFNB113 carcinoembryonic antigen related cell adhesion molecule 16 protein-coding chr2-5521 chr2 150795826 150796036 + 10.6 0.000 Intergenic L1PA8A|LINE|L1 167034 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr8-3147 chr8 74277016 74277226 + 10.6 0.000 intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 44240 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr20-1196 chr20 6492503 6492713 + 10.6 0.000 intron (NR_109953, intron 3 of 3) intron (NR_109953, intron 3 of 3) 65876 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr10-8639 chr10 99235188 99235398 + 10.6 0.000 intron (NM_021828, intron 1 of 11) intron (NM_021828, intron 1 of 11) 582 NM_001166246 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding chr14-1550 chr14 67485429 67485639 + 10.6 0.000 intron (NM_001348543, intron 2 of 2) intron (NM_001348543, intron 2 of 2) 3187 NM_001348542 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr3-2972 chr3 74981804 74982014 + 10.6 0.000 Intergenic MER45A|DNA|hAT-Tip100 -232567 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr7-7405 chr7 73736949 73737159 + 10.6 0.000 exon (NM_148912, exon 5 of 6) exon (NM_148912, exon 5 of 6) 1813 NM_148913 83451 Hs.647045 NM_148912 ENSG00000106077 ABHD11 PP1226|WBSCR21 abhydrolase domain containing 11 protein-coding chr9-4602 chr9 102950413 102950623 + 10.6 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -44815 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr6-4001 chr6 116883058 116883268 + 10.6 0.000 intron (NM_173560, intron 4 of 18) intron (NM_173560, intron 4 of 18) 5921 NM_173560 222546 Hs.352276 NM_173560 ENSG00000185002 RFX6 MTCHRS|MTFS|RFXDC1|dJ955L16.1 regulatory factor X6 protein-coding chr10-2151 chr10 86646634 86646844 + 10.6 0.000 Intergenic Intergenic -7808 NM_033282 94233 Hs.283922 NM_033282 ENSG00000122375 OPN4 MOP opsin 4 protein-coding chr17-2048 chr17 50169404 50169614 + 10.6 0.000 intron (NR_135553, intron 6 of 8) intron (NR_135553, intron 6 of 8) 2967 NR_024192 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr3-1771 chr3 8444424 8444634 + 10.6 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 57129 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr5-5511 chr5 143119941 143120151 + 10.6 0.000 intron (NR_146198, intron 17 of 22) intron (NR_146198, intron 17 of 22) -72454 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr9-2252 chr9 84230873 84231083 + 10.6 0.000 Intergenic MLT2F|LTR|ERVL 109780 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr14-1417 chr14 68458892 68459102 + 10.6 0.000 intron (NM_133509, intron 9 of 10) intron (NM_133509, intron 9 of 10) 169790 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr3-2765 chr3 153373738 153373948 + 10.6 0.000 Intergenic LTR33C|LTR|ERVL -110652 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr12-2821 chr12 120023816 120024026 + 10.6 0.000 intron (NR_147894, intron 3 of 8) L1MEc|LINE|L1 34077 NR_147893 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chr18-2244 chr18 69863534 69863744 + 10.6 0.000 3' UTR (NM_001303619, exon 5 of 5) 3' UTR (NM_001303619, exon 5 of 5) 84234 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr17-6418 chr17 3537245 3537455 + 10.6 0.000 intron (NM_001258205, intron 6 of 17) intron (NM_001258205, intron 6 of 17) 20462 NM_145068 162514 Hs.446255 NM_145068 ENSG00000167723 TRPV3 FNEPPK2|OLMS|VRL3 transient receptor potential cation channel subfamily V member 3 protein-coding chr1-3627 chr1 46464452 46464662 + 10.6 0.000 Intergenic Intergenic -14853 NR_121680 101929651 Hs.638707 NR_121680 ENSG00000224863 LINC01398 - long intergenic non-protein coding RNA 1398 ncRNA chr3-9848 chr3 78988442 78988652 + 10.6 0.000 intron (NM_002941, intron 3 of 30) intron (NM_002941, intron 3 of 30) 30912 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr14-2474 chr14 94681461 94681671 + 10.6 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 40841 NR_015340 388007 Hs.527795 NR_015340 ENSG00000187483 SERPINA13P SERPINA13|UNQ6121 serpin family A member 13, pseudogene pseudo chr22-1402 chr22 38975748 38975958 + 10.6 0.000 intron (NM_001193289, intron 4 of 4) MER1A|DNA|hAT-Charlie -6494 NM_004900 9582 Hs.226307 NM_004900 ENSG00000179750 APOBEC3B A3B|APOBEC1L|ARCD3|ARP4|DJ742C19.2|PHRBNL|bK150C2.2 apolipoprotein B mRNA editing enzyme catalytic subunit 3B protein-coding chr1-1957 chr1 93608229 93608439 + 10.6 0.000 intron (NM_001261409, intron 3 of 11) intron (NM_001261409, intron 3 of 11) 5763 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr6-4699 chr6 56220278 56220488 + 10.6 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) 27197 NR_134849 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chrX-2399 chrX 72609420 72609630 + 10.6 0.000 intron (NM_002637, intron 23 of 31) intron (NM_002637, intron 23 of 31) -36422 NM_001166420 55869 Hs.310536 NM_018486 ENSG00000147099 HDAC8 CDA07|CDLS5|HD8|HDACL1|KDAC8|MRXS6|RPD3|WTS histone deacetylase 8 protein-coding chr11-3342 chr11 119144883 119145093 + 10.6 0.000 Intergenic Intergenic -4064 NM_001348191 64137 Hs.126378 NM_022169 ENSG00000172350 ABCG4 WHITE2 ATP binding cassette subfamily G member 4 protein-coding chr18-639 chr18 29758051 29758261 + 10.6 0.000 Intergenic LTR16A|LTR|ERVL -540754 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr13-4188 chr13 90044389 90044599 + 10.6 0.000 Intergenic L1M1|LINE|L1 75223 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr8-2611 chr8 59274850 59275060 + 10.6 0.000 Intergenic Intergenic 155745 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr2-10050 chr2 36526279 36526489 + 10.6 0.000 intron (NM_016441, intron 13 of 16) intron (NM_016441, intron 13 of 16) 71784 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr3-3244 chr3 45906806 45907016 + 10.6 0.000 intron (NM_001276379, intron 2 of 9) intron (NM_001276379, intron 2 of 9) 8813 NM_001276378 54585 Hs.30824 NM_020347 ENSG00000163818 LZTFL1 BBS17 leucine zipper transcription factor like 1 protein-coding chr10-5087 chr10 45678790 45679000 + 10.6 0.000 non-coding (NR_160521, exon 1 of 8) non-coding (NR_160521, exon 1 of 8) 379 NR_160521 653234 NR_160521 AGAP10P AGAP10|CTGLF10P|CTGLF7|bA144G6.2|bA358L16.1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 10, pseudogene pseudo chr17-3218 chr17 6597020 6597230 + 10.6 0.000 intron (NR_147088, intron 13 of 17) MIRb|SINE|MIR -40570 NM_031220 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr10-8958 chr10 118578815 118579025 + 10.6 0.000 Intergenic Intergenic 16728 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chr1-7780 chr1 43565537 43565747 + 10.6 0.000 intron (NM_001329137, intron 6 of 34) CpG 34759 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr2-8657 chr2 147800305 147800515 + 10.6 0.000 Intergenic MLT2F|LTR|ERVL -44107 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr12-7823 chr12 99708521 99708731 + 10.6 0.000 intron (NM_152788, intron 8 of 25) MLT1D|LTR|ERVL-MaLR 60873 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr18-1392 chr18 58579512 58579722 + 10.6 0.000 exon (NM_052947, exon 4 of 13) exon (NM_052947, exon 4 of 13) -21003 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr3-3778 chr3 12706407 12706617 + 10.6 0.000 Intergenic LTR16|LTR|ERVL -42311 NM_002880 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr16-4680 chr16 79193891 79194101 + 10.6 0.000 intron (NM_001291997, intron 7 of 7) MIR|SINE|MIR 406741 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr4-2902 chr4 82105807 82106017 + 10.6 0.000 Intergenic Intergenic 268079 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr12-4684 chr12 48366283 48366493 + 10.6 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -15142 NM_001172682 121274 Hs.23492 NM_152320 ENSG00000167528 ZNF641 - zinc finger protein 641 protein-coding chr1-4415 chr1 204693181 204693391 + 10.6 0.000 Intergenic Intergenic -7548 NM_006338 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr4-5237 chr4 169241293 169241503 + 10.6 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 29558 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr18-577 chr18 77102716 77102926 + 10.6 0.000 intron (NM_001025100, intron 2 of 3) intron (NM_001025100, intron 2 of 3) 29962 NM_001025100 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr8-2743 chr8 103281569 103281779 + 10.6 0.000 intron (NR_148213, intron 2 of 3) MLT1H|LTR|ERVL-MaLR -16820 NM_001164615 8323 Hs.591863 NM_003506 ENSG00000164930 FZD6 FZ-6|FZ6|HFZ6|NDNC10 frizzled class receptor 6 protein-coding chr6-5289 chr6 140572153 140572363 + 10.6 0.000 Intergenic Intergenic -111556 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr2-13941 chr2 184793219 184793429 + 10.6 0.000 intron (NM_194250, intron 1 of 3) L1PA16|LINE|L1 194795 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr7-2031 chr7 75984046 75984256 + 10.6 0.000 intron (NM_000941, intron 10 of 15) intron (NM_000941, intron 10 of 15) 10444 NM_001363462 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr15-1424 chr15 62964395 62964605 + 10.6 0.000 Intergenic Intergenic -78247 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr9-2740 chr9 96451084 96451294 + 10.6 0.000 intron (NM_014282, intron 1 of 7) CpG 1020 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr10-6031 chr10 126542130 126542340 + 10.6 0.000 intron (NM_001350922, intron 2 of 8) AluSx1|SINE|Alu -20742 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr9-3907 chr9 134545212 134545422 + 10.6 0.000 Intergenic Intergenic -96488 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr8-4630 chr8 133200803 133201013 + 10.6 0.000 intron (NM_001204870, intron 1 of 1) L2b|LINE|L2 9869 NM_001204869 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr21-363 chr21 40139768 40139978 + 10.6 0.000 intron (NR_073202, intron 18 of 32) (TG)n|Simple_repeat|Simple_repeat 72558 NR_039917 100616148 NR_039917 ENSG00000263973 MIR4760 - microRNA 4760 ncRNA chr14-2019 chr14 59306124 59306334 + 10.6 0.000 intron (NM_001270520, intron 3 of 24) intron (NM_001270520, intron 3 of 24) 42788 NM_014992 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr2-9013 chr2 196331228 196331438 + 10.6 0.000 intron (NM_020760, intron 4 of 28) intron (NM_020760, intron 4 of 28) 30844 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr7-6055 chr7 112441916 112442126 + 10.6 0.000 intron (NM_001197080, intron 1 of 11) intron (NM_001197080, intron 1 of 11) -8407 NM_001550 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr17-4425 chr17 41795908 41796118 + 10.6 0.000 Intergenic MER47A|DNA|TcMar-Tigger -9245 NM_001352776 3728 Hs.514174 NM_002230 ENSG00000173801 JUP CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr8-2677 chr8 88958031 88958241 + 10.6 0.000 Intergenic Intergenic -630653 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr4-8263 chr4 140461028 140461238 + 10.6 0.000 intron (NM_001277353, intron 7 of 10) intron (NM_001277353, intron 7 of 10) -33472 NM_001130675 1047 Hs.86368 NM_004362 ENSG00000153132 CLGN - calmegin protein-coding chr11-1890 chr11 18721241 18721451 + 10.6 0.000 intron (NM_173588, intron 4 of 22) CpG 4842 NR_160413 283284 Hs.434152 NM_173588 ENSG00000179057 IGSF22 IGFN2 immunoglobulin superfamily member 22 protein-coding chr11-3339 chr11 118290986 118291196 + 10.6 0.000 Intergenic Intergenic -13489 NM_000733 916 Hs.3003 NM_000733 ENSG00000198851 CD3E IMD18|T3E|TCRE CD3e molecule protein-coding chr17-3708 chr17 17856168 17856378 + 10.6 0.000 intron (NM_001288787, intron 11 of 13) intron (NM_001288787, intron 11 of 13) -19262 NM_004176 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr9-6493 chr9 97441710 97441920 + 10.6 0.000 exon (NM_014290, exon 6 of 17) exon (NM_014290, exon 6 of 17) 29719 NM_014290 23424 Hs.193842 NM_014290 ENSG00000196116 TDRD7 CATC4|PCTAIRE2BP|TRAP tudor domain containing 7 protein-coding chr1-6681 chr1 51924500 51924710 + 10.6 0.000 intron (NM_002867, intron 4 of 4) intron (NM_002867, intron 4 of 4) -45668 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr1-9387 chr1 30915436 30915646 + 10.6 0.000 Intergenic Intergenic -6783 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr14-1377 chr14 31501993 31502203 + 10.6 0.000 Intergenic LTR16C|LTR|ERVL -14059 NM_001197184 2856 Hs.727479 NM_001197184 ENSG00000214943 GPR33 - G protein-coupled receptor 33 (gene/pseudogene) protein-coding chr3-6625 chr3 127060652 127060862 + 10.6 0.000 Intergenic L1MC2|LINE|L1 72163 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr22-820 chr22 19991763 19991973 + 10.6 0.000 intron (NM_001670, intron 2 of 19) intron (NM_001670, intron 2 of 19) 24955 NM_001670 421 Hs.713616 NM_001670 ENSG00000099889 ARVCF - ARVCF delta catenin family member protein-coding chr1-8319 chr1 50127326 50127536 + 10.6 0.000 intron (NM_001324217, intron 1 of 3) L2c|LINE|L2 17598 NM_001324217 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding chr10-5569 chr10 89301937 89302147 + 10.6 0.000 promoter-TSS (NM_001547) promoter-TSS (NM_001547) -4 NM_001547 3433 Hs.437609 NM_001547 ENSG00000119922 IFIT2 G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 interferon induced protein with tetratricopeptide repeats 2 protein-coding chr11-5477 chr11 76311632 76311842 + 10.6 0.000 Intergenic Intergenic 69228 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr1-15968 chr1 192544852 192545062 + 10.6 0.000 Intergenic Intergenic -30816 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G protein signaling 1 protein-coding chr16-4033 chr16 1049799 1050009 + 10.6 0.000 Intergenic Intergenic -22852 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr19-4689 chr19 18087372 18087582 + 10.6 0.000 promoter-TSS (NM_001290023) promoter-TSS (NM_001290023) -543 NM_001290023 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr4-1317 chr4 139657048 139657258 + 10.6 0.000 Intergenic Intergenic -8615 NM_001204367 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr12-5137 chr12 98909439 98909649 + 10.6 0.000 intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) -14253 NM_001352208 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr1-8608 chr1 188667626 188667836 + 10.6 0.000 Intergenic HERV4_I-int|LTR|ERV1 1224103 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr8-2692 chr8 93837918 93838128 + 10.6 0.000 Intergenic L2b|LINE|L2 78096 NR_039602 100616169 NR_039602 ENSG00000284288 MIR378D2 mir-378d-2 microRNA 378d-2 ncRNA chr4-3033 chr4 134992867 134993077 + 10.6 0.000 Intergenic Intergenic 130587 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr5-2760 chr5 150401258 150401468 + 10.6 0.000 TTS (NM_004355) TTS (NM_004355) 11393 NM_001364084 972 Hs.436568 NM_004355 ENSG00000019582 CD74 DHLAG|HLADG|II|Ia-GAMMA|p33 CD74 molecule protein-coding chr17-3252 chr17 30296722 30296932 + 10.6 0.000 Intergenic AluJb|SINE|Alu -4883 NM_000386 642 Hs.371914 NM_000386 ENSG00000108578 BLMH BH|BMH bleomycin hydrolase protein-coding chr12-5167 chr12 102849604 102849814 + 10.6 0.000 intron (NM_000277, intron 8 of 12) intron (NM_000277, intron 8 of 12) -25310 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr3-8677 chr3 182090984 182091194 + 10.6 0.000 Intergenic L1ME3F|LINE|L1 138725 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr10-2403 chr10 124982474 124982684 + 10.6 0.000 intron (NM_017580, intron 6 of 8) intron (NM_017580, intron 6 of 8) 23439 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr17-6017 chr17 78386195 78386405 + 10.6 0.000 intron (NR_111989, intron 1 of 8) intron (NR_111989, intron 1 of 8) 7651 NR_110601 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr15-4984 chr15 80035676 80035886 + 10.6 0.000 Intergenic Intergenic -23787 NM_001242918 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr6-2723 chr6 54808970 54809180 + 10.6 0.000 Intergenic Intergenic -37696 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr10-5017 chr10 33454549 33454759 + 10.6 0.000 Intergenic Intergenic -119749 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr8-2771 chr8 117929301 117929511 + 10.6 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -8493 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr16-1134 chr16 74774632 74774842 + 10.6 0.000 promoter-TSS (NM_024306) promoter-TSS (NM_024306) 83 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr7-1600 chr7 155002600 155002810 + 10.6 0.000 promoter-TSS (NR_028090) promoter-TSS (NR_028090) 419 NM_007349 22976 Hs.443881 NM_007349 ENSG00000157212 PAXIP1 CAGF28|CAGF29|PACIP1|PAXIP1L|PTIP|TNRC2 PAX interacting protein 1 protein-coding chr17-3838 chr17 43668003 43668213 + 10.6 0.000 Intergenic Intergenic -6186 NM_001040002 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr1-9506 chr1 38067636 38067846 + 10.6 0.000 Intergenic MIR3|SINE|MIR -20948 NM_002699 5453 Hs.1837 NM_002699 ENSG00000185668 POU3F1 OCT6|OTF6|SCIP POU class 3 homeobox 1 protein-coding chr1-13032 chr1 165219462 165219672 + 10.6 0.000 intron (NM_177398, intron 4 of 8) intron (NM_177398, intron 4 of 8) 136674 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr18-2725 chr18 70717389 70717599 + 10.6 0.000 Intergenic L1PA5|LINE|L1 -66540 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr7-1848 chr7 155070057 155070267 + 10.6 0.000 promoter-TSS (NM_024012) promoter-TSS (NM_024012) -162 NM_024012 3361 Hs.65791 NM_024012 ENSG00000157219 HTR5A 5-HT5A 5-hydroxytryptamine receptor 5A protein-coding chr21-1114 chr21 36028467 36028677 + 10.6 0.000 Intergenic Intergenic 23252 NR_110419 100996609 Hs.742062 NR_110419 LINC01436 - long intergenic non-protein coding RNA 1436 ncRNA chr7-4861 chr7 105734926 105735136 + 10.6 0.000 intron (NM_020725, intron 3 of 11) intron (NM_020725, intron 3 of 11) -55869 NM_138495 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr12-3014 chr12 125147924 125148134 + 10.6 0.000 Intergenic MLT2A1|LTR|ERVL -38357 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr10-1951 chr10 17303626 17303836 + 10.6 0.000 Intergenic SATR2|Satellite|Satellite -73746 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr1-9019 chr1 11496222 11496432 + 10.6 0.000 intron (NM_020780, intron 1 of 20) intron (NM_020780, intron 1 of 20) 17172 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chrX-1843 chrX 106982382 106982592 + 10.6 0.000 intron (NM_001085354, intron 5 of 16) intron (NM_001085354, intron 5 of 16) 17725 NM_024657 79710 Hs.496544 NM_024657 ENSG00000133131 MORC4 ZCW4|ZCWCC2|dJ75H8.2 MORC family CW-type zinc finger 4 protein-coding chr9-4132 chr9 135921767 135921977 + 10.6 0.000 Intergenic Intergenic -14326 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr5-4073 chr5 58589332 58589542 + 10.6 0.000 intron (NM_138453, intron 1 of 4) L1ME2|LINE|L1 6362 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr1-7746 chr1 32968244 32968454 + 10.6 0.000 Intergenic Intergenic -3540 NM_001127361 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chr12-4250 chr12 113499250 113499460 + 10.6 0.000 Intergenic AluSz6|SINE|Alu 27352 NR_126425 104355219 Hs.641707 NR_126425 LHX5-AS1 locus 4010|locus4010 LHX5 antisense RNA 1 ncRNA chr6-2659 chr6 2369745 2369955 + 10.6 0.000 intron (NR_046229, intron 4 of 6) MLT1I|LTR|ERVL-MaLR 124097 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr9-4265 chr9 97395848 97396058 + 10.6 0.000 intron (NR_026847, intron 2 of 5) intron (NR_026847, intron 2 of 5) 738 NR_026847 286359 Hs.132262 NM_182600 LOC286359 - uncharacterized LOC286359 ncRNA chr17-3873 chr17 48944667 48944877 + 10.6 0.000 promoter-TSS (NM_001317192) promoter-TSS (NM_001317192) 70 NM_001317192 11267 Hs.127249 NM_007241 ENSG00000159210 SNF8 Dot3|EAP30|VPS22 SNF8 subunit of ESCRT-II protein-coding chr7-7205 chr7 16223745 16223955 + 10.6 0.000 intron (NM_001101426, intron 8 of 9) intron (NM_001101426, intron 8 of 9) 13364 NR_038947 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr6-4175 chr6 1637035 1637245 + 10.6 0.000 intron (NM_001253846, intron 9 of 10) intron (NM_001253846, intron 9 of 10) 27225 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr2-8145 chr2 82600548 82600758 + 10.6 0.000 Intergenic Intergenic -256150 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr15-1788 chr15 78650074 78650284 + 10.6 0.000 Intergenic Intergenic -8969 NM_000750 1143 Hs.624178 NM_000750 ENSG00000117971 CHRNB4 - cholinergic receptor nicotinic beta 4 subunit protein-coding chr12-3436 chr12 111556319 111556529 + 10.6 0.000 intron (NM_001310121, intron 1 of 25) intron (NM_001310121, intron 1 of 25) 42891 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr2-7818 chr2 46136164 46136374 + 10.6 0.000 intron (NM_005400, intron 11 of 14) intron (NM_005400, intron 11 of 14) -161138 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr8-3928 chr8 42292026 42292236 + 10.6 0.000 intron (NR_033819, intron 4 of 20) intron (NR_033819, intron 4 of 20) 20829 NR_040009 3551 Hs.597664 NM_001556 ENSG00000104365 IKBKB IKK-beta|IKK2|IKKB|IMD15|IMD15A|IMD15B|NFKBIKB inhibitor of nuclear factor kappa B kinase subunit beta protein-coding chrX-1638 chrX 125017512 125017722 + 10.6 0.000 Intergenic L1PA7|LINE|L1 -53800 NM_014253 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr5-7866 chr5 73029483 73029693 + 10.6 0.000 intron (NM_001146032, intron 7 of 24) MSTB|LTR|ERVL-MaLR 73547 NM_001146032 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr9-3526 chr9 35459471 35459681 + 10.6 0.000 intron (NR_003581, intron 11 of 17) HERVIP10FH-int|LTR|ERV1 -30535 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chrX-2508 chrX 94616756 94616966 + 10.6 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 446365 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr22-2554 chr22 26503514 26503724 + 10.6 0.000 intron (NM_001346861, intron 7 of 14) intron (NM_001346861, intron 7 of 14) 8854 NM_012143 24144 Hs.20225 NM_012143 ENSG00000100109 TFIP11 NTR1|STIP|STIP-1|Spp382|TIP39|bK445C9.6 tuftelin interacting protein 11 protein-coding chr20-2818 chr20 58225950 58226160 + 10.6 0.000 intron (NM_001304369, intron 1 of 3) intron (NM_001304369, intron 1 of 3) 2598 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr10-1306 chr10 69241576 69241786 + 10.6 0.000 intron (NM_025130, intron 6 of 17) AluSx1|SINE|Alu -9191 NR_120648 101928994 Hs.562925 NR_120648 ENSG00000229261 LOC101928994 - uncharacterized LOC101928994 ncRNA chr2-5870 chr2 239960483 239960693 + 10.6 0.000 non-coding (NR_136156, exon 8 of 8) non-coding (NR_136156, exon 8 of 8) -17494 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr6-1541 chr6 71194791 71195001 + 10.6 0.000 Intergenic L1MC4|LINE|L1 -93915 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr3-4909 chr3 188220552 188220762 + 10.6 0.000 intron (NM_005578, intron 1 of 10) intron (NM_005578, intron 1 of 10) -4748 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr8-3602 chr8 141720120 141720330 + 10.6 0.000 Intergenic Intergenic 66088 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr9-4985 chr9 20650786 20650996 + 10.6 0.000 Intergenic Intergenic -7418 NM_017794 54914 Hs.136247 NM_017794 ENSG00000188352 FOCAD KIAA1797 focadhesin protein-coding chr5-2666 chr5 24445431 24445641 + 10.6 0.000 Intergenic Intergenic 199442 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr2-3725 chr2 235060851 235061061 + 10.6 0.000 Intergenic L2a|LINE|L2 33221 NM_001371306 chr2-10078 chr2 46200434 46200644 + 10.6 0.000 Intergenic Intergenic -96868 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr5-3829 chr5 104650637 104650847 + 10.6 0.000 Intergenic Intergenic -448732 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr6-3273 chr6 153847242 153847452 + 10.6 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -163149 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr4-3477 chr4 124749604 124749814 + 10.6 0.000 Intergenic Intergenic -36977 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr4-3486 chr4 134507447 134507657 + 10.6 0.000 intron (NR_147155, intron 3 of 3) intron (NR_147155, intron 3 of 3) 83684 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr3-4287 chr3 156643809 156644019 + 10.6 0.000 Intergenic Intergenic -30676 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr1-10861 chr1 205088508 205088718 + 10.6 0.000 3' UTR (NM_005057, exon 14 of 14) 3' UTR (NM_005057, exon 14 of 14) -4153 NM_203376 388730 Hs.146928 NM_203376 ENSG00000174529 TMEM81 HC3107|KVLA2788|UNQ2788 transmembrane protein 81 protein-coding chr19-2885 chr19 38375466 38375676 + 10.6 0.000 intron (NM_002812, intron 1 of 6) intron (NM_002812, intron 1 of 6) 1021 NM_002812 5714 Hs.78466 NM_002812 ENSG00000099341 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome 26S subunit, non-ATPase 8 protein-coding chr3-7018 chr3 171362682 171362892 + 10.6 0.000 intron (NR_027767, intron 2 of 2) MIR|SINE|MIR 97618 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr17-2554 chr17 43251593 43251803 + 10.6 0.000 TTS (NR_002716).5 TTS (NR_002716).5 321 NR_002716 6066 NR_002716 ENSG00000274585 RNU2-1 RNU2|U2 RNA, U2 small nuclear 1 snRNA chr15-2711 chr15 89487900 89488110 + 10.6 0.000 intron (NM_001321041, intron 1 of 10) MIR3|SINE|MIR 8578 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr19-2794 chr19 47176986 47177196 + 10.6 0.000 intron (NM_001145713, intron 6 of 6) intron (NM_001145713, intron 6 of 6) 46256 NM_005500 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr3-10416 chr3 130700875 130701085 + 10.6 0.000 intron (NM_014602, intron 13 of 19) intron (NM_014602, intron 13 of 19) 45849 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr22-1796 chr22 31441054 31441264 + 10.6 0.000 intron (NM_001164502, intron 15 of 16) AluSg|SINE|Alu 41555 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chr10-2501 chr10 35705086 35705296 + 10.6 0.000 Intergenic Intergenic -63757 NM_031866 8325 Hs.302634 NM_031866 ENSG00000177283 FZD8 FZ-8|hFZ8 frizzled class receptor 8 protein-coding chr4-2637 chr4 158042637 158042847 + 10.6 0.000 Intergenic L1PA16|LINE|L1 -128010 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr18-1111 chr18 74652538 74652748 + 10.6 0.000 intron (NM_001146190, intron 2 of 3) intron (NM_001146190, intron 2 of 3) 21680 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr2-8985 chr2 191318286 191318496 + 10.6 0.000 intron (NM_012223, intron 3 of 28) intron (NM_012223, intron 3 of 28) 72987 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr15-2856 chr15 41507832 41508042 + 10.6 0.000 intron (NM_001135685, intron 8 of 17) L2b|LINE|L2 5890 NM_206961 4058 Hs.434481 NM_002344 ENSG00000062524 LTK TYK1 leukocyte receptor tyrosine kinase protein-coding chr14-3783 chr14 57500651 57500861 + 10.6 0.000 Intergenic Intergenic -6899 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr2-8805 chr2 168412527 168412737 + 10.6 0.000 Intergenic L1PA7|LINE|L1 -43640 NM_203463 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr17-3536 chr17 73388282 73388492 + 10.6 0.000 intron (NM_001144952, intron 29 of 44) LTR16C|LTR|ERVL -76386 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chrX-1049 chrX 118116405 118116615 + 10.6 0.000 5' UTR (NM_001168302, exon 1 of 8) 5' UTR (NM_001168302, exon 1 of 8) 355 NM_001168303 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr11-3270 chr11 76166356 76166566 + 10.6 0.000 Intergenic Intergenic 40041 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr13-1550 chr13 30373322 30373532 + 10.6 0.000 intron (NR_024464, intron 1 of 4) intron (NR_024464, intron 1 of 4) 487 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr6-5339 chr6 146271127 146271337 + 10.6 0.000 intron (NM_001278065, intron 3 of 9) AluSc8|SINE|Alu 242034 NM_001278067 2911 Hs.32945 NM_000838 ENSG00000152822 GRM1 GPRC1A|MGLU1|MGLUR1|PPP1R85|SCA44|SCAR13 glutamate metabotropic receptor 1 protein-coding chr19-3020 chr19 48874236 48874446 + 10.6 0.000 exon (NM_014330, exon 2 of 3) exon (NM_014330, exon 2 of 3) 1949 NM_014330 23645 Hs.631593 NM_014330 ENSG00000087074 PPP1R15A GADD34 protein phosphatase 1 regulatory subunit 15A protein-coding chr17-3021 chr17 76867486 76867696 + 10.6 0.000 promoter-TSS (NM_001199172) promoter-TSS (NM_001199172) -813 NM_144677 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B protein-coding chr10-4124 chr10 73914122 73914332 + 10.6 0.000 intron (NM_001319191, intron 7 of 9) intron (NM_001319191, intron 7 of 9) 3095 NM_002658 5328 Hs.77274 NM_002658 ENSG00000122861 PLAU ATF|BDPLT5|QPD|UPA|URK|u-PA plasminogen activator, urokinase protein-coding chr12-941 chr12 47705759 47705969 + 10.6 0.000 intron (NM_024604, intron 1 of 16) CpG 166 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr15-2701 chr15 86050904 86051114 + 10.6 0.000 Intergenic L1ME1|LINE|L1 -28611 NM_152336 123624 Hs.31795 NM_152336 ENSG00000273540 AGBL1 CCP4|FECD8 ATP/GTP binding protein like 1 protein-coding chrX-1523 chrX 23285793 23286003 + 10.6 0.000 intron (NR_073010, intron 1 of 11) intron (NR_073010, intron 1 of 11) 7248 NR_073010 100873065 Hs.628459 NR_046436 PTCHD1-AS DDX53-AS1|PTCHD1AS1|PTCHD1AS2 PTCHD1 antisense RNA (head to head) ncRNA chr21-510 chr21 33969467 33969677 + 10.6 0.000 non-coding (NR_038883, exon 3 of 3) non-coding (NR_038883, exon 3 of 3) -6810 NR_134561 101928126 Hs.436879 NR_134561 LOC101928126 - uncharacterized LOC101928126 ncRNA chr6-3600 chr6 91988894 91989104 + 10.6 0.000 Intergenic Intergenic -298571 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr22-1893 chr22 45023663 45023873 + 10.6 0.000 Intergenic MIRb|SINE|MIR -13763 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr12-1174 chr12 49663094 49663304 + 10.6 0.000 intron (NM_001367835, intron 4 of 26) intron (NM_001367835, intron 4 of 26) 32655 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr1-9824 chr1 60637998 60638208 + 10.6 0.000 Intergenic Intergenic -15418 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr4-5035 chr4 140830488 140830698 + 10.6 0.000 Intergenic Intergenic -74208 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr3-4498 chr3 62831169 62831379 + 10.6 0.000 intron (NM_003716, intron 1 of 29) MIRb|SINE|MIR 44142 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr8-4124 chr8 73421118 73421328 + 10.6 0.000 3' UTR (NM_001164380, exon 15 of 15) 3' UTR (NM_001164380, exon 15 of 15) 1149 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA chr2-7441 chr2 11554078 11554288 + 10.6 0.000 intron (NM_033090, intron 1 of 10) intron (NM_033090, intron 1 of 10) 11497 NM_033090 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr2-11541 chr2 240715137 240715347 + 10.6 0.000 3' UTR (NM_001244008, exon 49 of 49) 3' UTR (NM_001244008, exon 49 of 49) 23376 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr11-4073 chr11 20031350 20031560 + 10.6 0.000 intron (NM_001111019, intron 2 of 27) intron (NM_001111019, intron 2 of 27) 8899 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr13-750 chr13 43229532 43229742 + 10.6 0.000 intron (NM_001347966, intron 16 of 17) L2a|LINE|L2 116472 NR_047013 100874159 Hs.633241 NR_047013 LINC00400 - long intergenic non-protein coding RNA 400 ncRNA chr3-2717 chr3 78204925 78205135 + 10.6 0.000 Intergenic Intergenic -156067 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr1-13360 chr1 1052952 1053162 + 10.6 0.000 intron (NM_001305275, intron 35 of 38) intron (NM_001305275, intron 35 of 38) -6677 NR_148960 100288175 Hs.713286 NR_148960 ENSG00000217801 LOC100288175 - uncharacterized LOC100288175 ncRNA chr5-7529 chr5 37553170 37553380 + 10.6 0.000 intron (NM_001345998, intron 9 of 17) MIR3|SINE|MIR 173957 NM_001345999 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr2-9130 chr2 208463427 208463637 + 10.6 0.000 intron (NM_005048, intron 9 of 12) MIR|SINE|MIR 56702 NM_005048 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chrX-1991 chrX 12828461 12828671 + 10.6 0.000 Intergenic Intergenic 37211 NM_001039091 5634 Hs.654581 NM_002765 ENSG00000101911 PRPS2 PRSII phosphoribosyl pyrophosphate synthetase 2 protein-coding chr2-3570 chr2 39723911 39724121 + 10.6 0.000 Intergenic Intergenic 55242 NM_025264 80745 Hs.468254 NM_025264 ENSG00000138050 THUMPD2 C2orf8 THUMP domain containing 2 protein-coding chr22-1016 chr22 24438016 24438226 + 10.6 0.000 TTS (NR_028483) TTS (NR_028483) 6002 NM_001278498 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chr12-6254 chr12 42179526 42179736 + 10.6 0.000 intron (NR_135139, intron 4 of 6) AluJb|SINE|Alu -34757 NM_173601 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr2-3409 chr2 46748025 46748235 + 10.6 0.000 intron (NM_144949, intron 1 of 1) intron (NM_144949, intron 1 of 1) 48835 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr21-188 chr21 15064079 15064289 + 10.6 0.000 intron (NM_003489, intron 1 of 3) CpG 816 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr10-3555 chr10 78520507 78520717 + 10.6 0.000 Intergenic Intergenic 253270 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr22-744 chr22 50532171 50532381 + 10.6 0.000 intron (NM_001014440, intron 1 of 6) CpG-19375 303 NM_001014440 440836 Hs.531314 NM_001014440 ENSG00000177989 ODF3B ODF3L3 outer dense fiber of sperm tails 3B protein-coding chr5-5717 chr5 168107094 168107304 + 10.6 0.000 intron (NM_001368145, intron 8 of 26) intron (NM_001368145, intron 8 of 26) -58646 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr15-1062 chr15 72861414 72861624 + 10.6 0.000 Intergenic Intergenic -77761 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr6-1730 chr6 38787656 38787866 + 10.6 0.000 intron (NM_001371, intron 17 of 91) intron (NM_001371, intron 17 of 91) 72450 NM_001371 1769 Hs.520106 NM_001371 ENSG00000124721 DNAH8 ATPase|hdhc9 dynein axonemal heavy chain 8 protein-coding chr15-3304 chr15 78415498 78415708 + 10.6 0.000 Intergenic Intergenic -21828 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr4-5315 chr4 181105415 181105625 + 10.6 0.000 intron (NR_033918, intron 2 of 2) intron (NR_033918, intron 2 of 2) 53629 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr3-6250 chr3 68451936 68452146 + 10.6 0.000 intron (NM_001252216, intron 3 of 4) intron (NM_001252216, intron 3 of 4) -48596 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr9-4607 chr9 106060843 106061053 + 10.6 0.000 Intergenic HAL1|LINE|L1 366407 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr5-4877 chr5 66367104 66367314 + 10.6 0.000 Intergenic Intergenic 144395 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr5-6069 chr5 5406383 5406593 + 10.6 0.000 Intergenic ERVL-E-int|LTR|ERVL -16189 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr8-1751 chr8 27561358 27561568 + 10.6 0.000 Intergenic L2c|LINE|L2 49288 NR_106902 102465508 NR_106902 ENSG00000284280 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA chr15-1284 chr15 100483899 100484109 + 10.6 0.000 intron (NM_001290341, intron 7 of 13) intron (NM_001290341, intron 7 of 13) 60282 NM_001290342 204219 Hs.662371 NM_178842 ENSG00000154227 CERS3 ARCI9|LASS3 ceramide synthase 3 protein-coding chr8-3927 chr8 42270595 42270805 + 10.6 0.000 promoter-TSS (NM_001556) promoter-TSS (NM_001556) 261 NR_125823 101929897 Hs.60288 NR_125823 ENSG00000253408 LOC101929897 - uncharacterized LOC101929897 ncRNA chr9-7858 chr9 85539067 85539277 + 10.6 0.000 Intergenic Intergenic 202857 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr2-2001 chr2 61012494 61012704 + 10.6 0.000 intron (NM_144709, intron 1 of 17) AluSq2|SINE|Alu 4613 NM_001322124 150962 Hs.368348 NM_144709 ENSG00000162927 PUS10 CCDC139|DOBI pseudouridine synthase 10 protein-coding chr1-4464 chr1 7027923 7028133 + 10.6 0.000 intron (NM_001349608, intron 2 of 21) AluSx|SINE|Alu 242574 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr15-810 chr15 72783843 72784053 + 10.6 0.000 promoter-TSS (NM_001365229) promoter-TSS (NM_001365229) -190 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr1-4541 chr1 54850023 54850233 + 10.6 0.000 3' UTR (NM_014762, exon 9 of 9) 3' UTR (NM_014762, exon 9 of 9) 37067 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr18-1184 chr18 23738078 23738288 + 10.6 0.000 intron (NM_001127717, intron 2 of 73) intron (NM_001127717, intron 2 of 73) 48730 NM_001127717 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr10-2958 chr10 45662478 45662688 + 10.6 0.000 5' UTR (NM_001282905, exon 3 of 11) 5' UTR (NM_001282905, exon 3 of 11) 10149 NM_001282905 93550 Hs.89029 NM_174890 ENSG00000172671 ZFAND4 ANUBL1 zinc finger AN1-type containing 4 protein-coding chr3-4883 chr3 175911056 175911266 + 10.6 0.000 Intergenic Intergenic -134828 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr14-3062 chr14 61402408 61402618 + 10.6 0.000 intron (NM_006255, intron 2 of 13) Charlie1a|DNA|hAT-Charlie 81070 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr7-4726 chr7 53421538 53421748 + 10.6 0.000 Intergenic ERVL-E-int|LTR|ERVL 386010 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr6-3817 chr6 35128617 35128827 + 10.6 0.000 5' UTR (NM_001366326, exon 3 of 9) 5' UTR (NM_001366326, exon 3 of 9) 12617 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr12-5270 chr12 109892376 109892586 + 10.6 0.000 Intergenic Intergenic -7793 NM_001143852 84260 Hs.410924 NM_032300 ENSG00000139437 TCHP TpMs trichoplein keratin filament binding protein-coding chr21-350 chr21 35932213 35932423 + 10.6 0.000 Intergenic Intergenic 45873 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr22-3312 chr22 18967330 18967540 + 10.6 0.000 Intergenic Intergenic -3063 NR_045121 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr2-3939 chr2 61646035 61646245 + 10.6 0.000 Intergenic L1MB5|LINE|L1 -107784 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr16-4102 chr16 2595029 2595239 + 10.6 0.000 intron (NM_001261816, intron 11 of 11) AluSc8|SINE|Alu -8250 NR_015441 652276 Hs.720448 NR_015441 ENSG00000215154 LOC652276 - potassium channel tetramerization domain containing 5 pseudogene pseudo chr11-3552 chr11 28058296 28058506 + 10.6 0.000 intron (NM_031217, intron 13 of 16) AluJo|SINE|Alu 1586 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr7-5315 chr7 26159317 26159527 + 10.6 0.000 intron (NM_004289, intron 1 of 3) L2c|LINE|L2 7224 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr3-4377 chr3 189324782 189324992 + 10.6 0.000 3' UTR (NM_198485, exon 6 of 6) 3' UTR (NM_198485, exon 6 of 6) -84293 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr17-8068 chr17 51542094 51542304 + 10.6 0.000 Intergenic Intergenic 106772 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr11-3305 chr11 101346640 101346850 + 10.6 0.000 Intergenic Intergenic 173160 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr4-4747 chr4 95334901 95335111 + 10.6 0.000 intron (NM_003728, intron 2 of 15) intron (NM_003728, intron 2 of 15) 213967 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr2-7761 chr2 39419669 39419879 + 10.6 0.000 intron (NM_003618, intron 1 of 33) intron (NM_003618, intron 1 of 33) 17511 NM_001270425 8491 Hs.655750 NM_003618 ENSG00000011566 MAP4K3 GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding chr1-9056 chr1 14592195 14592405 + 10.6 0.000 Intergenic Intergenic -6385 NM_201628 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr3-11025 chr3 181850748 181850958 + 10.6 0.000 Intergenic Intergenic -101511 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr13-2401 chr13 42660374 42660584 + 10.6 0.000 Intergenic Intergenic 86327 NM_003701 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr5-5489 chr5 140628877 140629087 + 10.6 0.000 Intergenic Intergenic 4193 NM_000591 929 Hs.163867 NM_000591 ENSG00000170458 CD14 - CD14 molecule protein-coding chr1-6811 chr1 91473941 91474151 + 10.6 0.000 Intergenic Intergenic -26801 NM_001134419 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr8-4053 chr8 62418488 62418698 + 10.6 0.000 intron (NM_001304533, intron 1 of 6) ERV3-16A3_I-int|LTR|ERVL 169739 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr5-4419 chr5 748391 748601 + 10.6 0.000 exon (NM_001351303, exon 5 of 11) exon (NM_001351303, exon 5 of 11) 18423 NM_001351303 653082 NM_001351303 ENSG00000206077 ZDHHC11B DHHC-11B zinc finger DHHC-type containing 11B protein-coding chr3-1114 chr3 129161168 129161378 + 10.6 0.000 promoter-TSS (NM_020701) promoter-TSS (NM_020701) -43 NM_001204890 100534599 Hs.512661 NM_001204890 ENSG00000261796 ISY1-RAB43 ISY1 ISY1-RAB43 readthrough protein-coding chr17-2818 chr17 15655465 15655675 + 10.6 0.000 intron (NM_001348119, intron 6 of 11) intron (NM_001348119, intron 6 of 11) 27381 NM_006470 10626 Hs.123534 NM_006470 ENSG00000221926 TRIM16 EBBP tripartite motif containing 16 protein-coding chr7-2101 chr7 5283566 5283776 + 10.6 0.000 intron (NM_153247, intron 1 of 10) CpG 728 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding KI270736.1-9 KI270736.1 162193 162403 + 10.6 0.000 NA NA NA NA chr15-5024 chr15 82229123 82229333 + 10.6 0.000 intron (NM_001040610, intron 6 of 17) intron (NM_001040610, intron 6 of 17) 33300 NM_001322845 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr3-8319 chr3 65247328 65247538 + 10.6 0.000 Intergenic Intergenic -559433 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr5-5049 chr5 91065655 91065865 + 10.6 0.000 intron (NR_003149, intron 85 of 89) intron (NR_003149, intron 85 of 89) 248642 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr2-5096 chr2 13201583 13201793 + 10.6 0.000 Intergenic THE1D|LTR|ERVL-MaLR -194675 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr2-1900 chr2 143083791 143084001 + 10.6 0.000 Intergenic Intergenic -45523 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr16-4459 chr16 55416136 55416346 + 10.6 0.000 Intergenic Intergenic 46056 NR_147198 107984884 Hs.666473 NR_147198 MMP2-AS1 - MMP2 antisense RNA 1 ncRNA chr4-3425 chr4 76768027 76768237 + 10.6 0.000 intron (NM_020859, intron 9 of 10) intron (NM_020859, intron 9 of 10) 130012 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chrX-2225 chrX 43707662 43707872 + 10.6 0.000 intron (NM_001270458, intron 4 of 15) intron (NM_001270458, intron 4 of 15) 52860 NM_001270458 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr14-3845 chr14 75611209 75611419 + 10.6 0.000 intron (NM_001195283, intron 1 of 9) intron (NM_001195283, intron 1 of 9) 5774 NM_001195283 55640 Hs.509966 NM_017791 ENSG00000119686 FLVCR2 C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH|SLC49A2 feline leukemia virus subgroup C cellular receptor family member 2 protein-coding chr1-9416 chr1 32285583 32285793 + 10.6 0.000 exon (NM_001330468, exon 12 of 12) exon (NM_001330468, exon 12 of 12) -6395 NM_004964 3065 Hs.88556 NM_004964 ENSG00000116478 HDAC1 GON-10|HD1|KDAC1|RPD3|RPD3L1 histone deacetylase 1 protein-coding chr1-14209 chr1 34806608 34806818 + 10.6 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 13714 NM_002060 2701 Hs.296310 NM_002060 ENSG00000187513 GJA4 CX37 gap junction protein alpha 4 protein-coding chr9-3419 chr9 134693729 134693939 + 10.6 0.000 intron (NM_001278074, intron 2 of 65) intron (NM_001278074, intron 2 of 65) -40991 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr4-1710 chr4 176792036 176792246 + 10.6 0.000 intron (NM_005429, intron 1 of 6) CpG 781 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr3-3906 chr3 46967313 46967523 + 10.6 0.000 intron (NM_144716, intron 2 of 7) L2b|LINE|L2 9083 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr16-1496 chr16 5033754 5033964 + 10.6 0.000 promoter-TSS (NM_016256) promoter-TSS (NM_016256) 76 NM_016256 51172 Hs.21334 NM_016256 ENSG00000103174 NAGPA APAA|UCE N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein-coding chr12-1630 chr12 113215006 113215216 + 10.6 0.000 intron (NM_001330452, intron 1 of 4) intron (NM_001330452, intron 1 of 4) 5983 NM_001330452 115811 Hs.568276 NM_138451 ENSG00000166578 IQCD 4933433C09Rik|CFAP84|DRC10 IQ motif containing D protein-coding chr10-2219 chr10 66627276 66627486 + 10.6 0.000 intron (NM_001127384, intron 9 of 17) intron (NM_001127384, intron 9 of 17) -298655 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr1-10126 chr1 101708041 101708251 + 10.6 0.000 Intergenic L2|LINE|L2 138934 NM_001288821 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr10-4082 chr10 51302564 51302774 + 10.6 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 3096 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr21-1185 chr21 43315856 43316066 + 10.6 0.000 Intergenic Intergenic 16078 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr3-8722 chr3 193680026 193680236 + 10.6 0.000 intron (NM_130831, intron 26 of 27) intron (NM_130831, intron 26 of 27) -52799 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA chr11-6095 chr11 34500364 34500574 + 10.6 0.000 intron (NM_001422, intron 2 of 6) intron (NM_001422, intron 2 of 6) 11255 NM_198381 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr19-2178 chr19 14413603 14413813 + 10.6 0.000 intron (NM_005804, intron 1 of 10) intron (NM_005804, intron 1 of 10) 5633 NM_005804 10212 Hs.311609 NM_005804 ENSG00000123136 DDX39A BAT1|BAT1L|DDX39|DDXL|URH49 DExD-box helicase 39A protein-coding chr3-2123 chr3 62007226 62007436 + 10.6 0.000 intron (NM_002841, intron 4 of 29) intron (NM_002841, intron 4 of 29) 311616 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr10-8258 chr10 75547756 75547966 + 10.6 0.000 intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) -4597 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA chr12-3883 chr12 116991066 116991276 + 10.6 0.000 intron (NM_153348, intron 7 of 10) intron (NM_153348, intron 7 of 10) -3834 NR_103809 100506551 Hs.657861 NR_103809 ENSG00000257279 LOC100506551 - uncharacterized LOC100506551 ncRNA chr8-2800 chr8 123189389 123189599 + 10.6 0.000 intron (NM_001288587, intron 1 of 3) MER4A1|LTR|ERV1 6829 NM_001321630 84985 Hs.379821 NM_032899 ENSG00000147689 FAM83A BJ-TSA-9 family with sequence similarity 83 member A protein-coding chr3-6360 chr3 86648824 86649034 + 10.6 0.000 Intergenic AluSq2|SINE|Alu 166986 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr9-1434 chr9 133923132 133923342 + 10.6 0.000 intron (NM_001134398, intron 2 of 29) L1MB5|LINE|L1 69087 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr19-1841 chr19 10472236 10472446 + 10.6 0.000 Intergenic AluJb|SINE|Alu 19409 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr10-3871 chr10 36887778 36887988 + 10.6 0.000 Intergenic (TTTATG)n|Simple_repeat|Simple_repeat -237974 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr11-10585 chr11 123007068 123007278 + 10.6 0.000 Intergenic Intergenic -10393 NR_027288 341056 Hs.620309 NR_027288 LOC341056 - SUMO1 activating enzyme subunit 1 pseudogene pseudo chr3-2799 chr3 6950976 6951186 + 10.6 0.000 intron (NM_000844, intron 1 of 9) L1PA4|LINE|L1 -57064 NR_131906 105376946 Hs.616038 NR_131906 ENSG00000237665 GRM7-AS2 - GRM7 antisense RNA 2 ncRNA chr8-1643 chr8 130258919 130259129 + 10.6 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 37509 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr6-3824 chr6 35972767 35972977 + 10.6 0.000 intron (NM_001193476, intron 10 of 19) intron (NM_001193476, intron 10 of 19) 51628 NM_138718 116369 Hs.435836 NM_052961 ENSG00000112053 SLC26A8 SPGF3|TAT1 solute carrier family 26 member 8 protein-coding chr16-2649 chr16 29740473 29740683 + 10.6 0.000 Intergenic LTR5B|LTR|ERVK 5412 NM_175900 283897 Hs.331095 NM_175900 ENSG00000185905 C16orf54 - chromosome 16 open reading frame 54 protein-coding chr17-5159 chr17 9014474 9014684 + 10.6 0.000 Intergenic MIRc|SINE|MIR -6931 NM_004822 9423 Hs.660885 NM_004822 ENSG00000065320 NTN1 MRMV4|NTN1L netrin 1 protein-coding chr2-4006 chr2 96286934 96287144 + 10.6 0.000 exon (NM_014014, exon 27 of 45) exon (NM_014014, exon 27 of 45) 18507 NM_014014 23020 Hs.246112 NM_014014 ENSG00000144028 SNRNP200 ASCC3L1|BRR2|HELIC2|RP33|U5-200KD small nuclear ribonucleoprotein U5 subunit 200 protein-coding chr4-4471 chr4 55503644 55503854 + 10.6 0.000 intron (NM_004898, intron 2 of 22) intron (NM_004898, intron 2 of 22) 42183 NM_001267843 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr7-5538 chr7 45342210 45342420 + 10.6 0.000 Intergenic MER47B|DNA|TcMar-Tigger 184524 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr10-5253 chr10 67382576 67382786 + 10.6 0.000 intron (NM_001127384, intron 5 of 17) MSTB|LTR|ERVL-MaLR 20729 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr16-3644 chr16 86182131 86182341 + 10.6 0.000 Intergenic Intergenic -13945 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr6-4327 chr6 16729362 16729572 + 10.6 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 30717 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr3-5634 chr3 10680438 10680648 + 10.6 0.000 Intergenic MIR3|SINE|MIR -53736 NR_046766 100874325 Hs.143004 NR_046766 ENSG00000224771 ATP2B2-IT2 - ATP2B2 intronic transcript 2 ncRNA chr4-3384 chr4 25146916 25147126 + 10.6 0.000 intron (NM_016955, intron 6 of 10) L2a|LINE|L2 13428 NM_016955 51091 Hs.253305 NM_016955 ENSG00000109618 SEPSECS LP|PCH2D|SLA|SLA/LP Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase protein-coding chr12-5060 chr12 90608372 90608582 + 10.6 0.000 Intergenic MLT1H-int|LTR|ERVL-MaLR -309546 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr12-2970 chr12 110373909 110374119 + 10.6 0.000 3' UTR (NM_016238, exon 11 of 11) 3' UTR (NM_016238, exon 11 of 11) 29716 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr14-1439 chr14 77508280 77508490 + 10.6 0.000 3' UTR (NM_004863, exon 12 of 12) 3' UTR (NM_004863, exon 12 of 12) -9569 NM_199296 145501 Hs.29742 NM_182509 ENSG00000100593 ISM2 TAIL1|THSD3 isthmin 2 protein-coding chr7-5939 chr7 100079741 100079951 + 10.6 0.000 intron (NM_001278284, intron 1 of 5) AluJr|SINE|Alu 1877 NM_001362776 7551 Hs.435302 NM_017715 ENSG00000166526 ZNF3 A8-51|HF.12|KOX25|PP838|Zfp113 zinc finger protein 3 protein-coding chr8-1914 chr8 37696787 37696997 + 10.6 0.000 intron (NM_025069, intron 1 of 1) CpG-27159 1110 NM_025069 80139 Hs.288042 NM_025069 ENSG00000183779 ZNF703 NLZ1|ZEPPO1|ZNF503L|ZPO1 zinc finger protein 703 protein-coding chr4-2063 chr4 15585745 15585955 + 10.6 0.000 intron (NM_001080522, intron 31 of 37) L1MC4|LINE|L1 69507 NM_012161 26234 Hs.643433 NM_012161 ENSG00000118564 FBXL5 FBL4|FBL5|FLR1 F-box and leucine rich repeat protein 5 protein-coding chr7-6730 chr7 5173322 5173532 + 10.6 0.000 Intergenic AluSz|SINE|Alu -16806 NM_016003 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr18-2256 chr18 72386209 72386419 + 10.6 0.000 Intergenic Intergenic 158028 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr1-5677 chr1 44648042 44648252 + 10.6 0.000 intron (NM_001319957, intron 11 of 13) intron (NM_001319957, intron 11 of 13) 22909 NR_145816 109623472 NR_145816 SNORD145 - small nucleolar RNA, C/D box 145 snoRNA chr5-4587 chr5 27788624 27788834 + 10.6 0.000 Intergenic AluJo|SINE|Alu 316437 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr12-5015 chr12 82835168 82835378 + 10.6 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 148118 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr7-8095 chr7 25725374 25725584 + 10.6 0.000 intron (NR_157808, intron 1 of 4) intron (NR_157808, intron 1 of 4) 25553 NR_157814 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr2-4454 chr2 215607811 215608021 + 10.6 0.000 Intergenic MER102b|DNA|hAT-Charlie -110127 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr17-3275 chr17 40399196 40399406 + 10.6 0.000 intron (NM_001067, intron 24 of 34) intron (NM_001067, intron 24 of 34) 18595 NM_001067 7153 Hs.156346 NM_001067 ENSG00000131747 TOP2A TOP2|TP2A DNA topoisomerase II alpha protein-coding chr15-1247 chr15 77176749 77176959 + 10.6 0.000 intron (NM_024776, intron 5 of 7) intron (NM_024776, intron 5 of 7) 48550 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr6-3787 chr6 21115339 21115549 + 10.6 0.000 intron (NM_017774, intron 13 of 15) intron (NM_017774, intron 13 of 15) 396448 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr16-3230 chr16 85706712 85706922 + 10.6 0.000 TTS (NM_206967) TTS (NM_206967) -17863 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr8-4552 chr8 125342410 125342620 + 10.6 0.000 intron (NM_001349486, intron 5 of 7) intron (NM_001349486, intron 5 of 7) -87843 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr6-3301 chr6 159111831 159112041 + 10.6 0.000 Intergenic Intergenic -57464 NM_032532 84624 Hs.520525 NM_032532 ENSG00000164694 FNDC1 AGS8|FNDC2|MEL4B3|bA243O10.1|dJ322A24.1 fibronectin type III domain containing 1 protein-coding chr2-4863 chr2 100857937 100858147 + 10.6 0.000 intron (NM_002518, intron 1 of 20) intron (NM_002518, intron 1 of 20) 37903 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr2-3135 chr2 176943862 176944072 + 10.6 0.000 Intergenic Intergenic 268444 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr18-2305 chr18 79414149 79414359 + 10.6 0.000 intron (NM_001278672, intron 2 of 8) intron (NM_001278672, intron 2 of 8) 13955 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr14-2549 chr14 25071592 25071802 + 10.6 0.000 Intergenic Intergenic -21400 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr1-4608 chr1 154353563 154353773 + 10.6 0.000 Intergenic L2|LINE|L2 24870 NM_001367934 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr11-6024 chr11 25920831 25921041 + 10.6 0.000 Intergenic THE1B|LTR|ERVL-MaLR -268187 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr10-5371 chr10 73708407 73708617 + 10.6 0.000 intron (NR_160427, intron 9 of 17) intron (NR_160427, intron 9 of 17) -10716 NM_001144000 729092 Hs.651147 NM_001144000 ENSG00000172650 AGAP5 CTGLF2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 protein-coding chr20-4314 chr20 51586047 51586257 + 10.6 0.000 Intergenic Intergenic -23313 NM_001136021 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr4-1067 chr4 107825569 107825779 + 10.6 0.000 intron (NM_001136258, intron 1 of 6) intron (NM_001136258, intron 1 of 6) 1109 NM_001136258 166929 Hs.595423 NM_152621 ENSG00000164023 SGMS2 SMS2 sphingomyelin synthase 2 protein-coding chr1-14891 chr1 82153267 82153477 + 10.6 0.000 Intergenic Intergenic 350919 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr2-8614 chr2 142186022 142186232 + 10.6 0.000 Intergenic Intergenic -54426 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr2-5551 chr2 164348485 164348695 + 10.6 0.000 Intergenic L1PA12|LINE|L1 219905 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr7-5984 chr7 102137827 102138037 + 10.6 0.000 intron (NM_001913, intron 8 of 22) AluJb|SINE|Alu -147209 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr9-3340 chr9 100597682 100597892 + 10.6 0.000 Intergenic L2a|LINE|L2 19708 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr7-2322 chr7 106231920 106232130 + 10.6 0.000 Intergenic L1M4|LINE|L1 52958 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr5-3384 chr5 141743383 141743593 + 10.6 0.000 Intergenic Intergenic -61258 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr1-10871 chr1 205630293 205630503 + 10.6 0.000 intron (NM_021795, intron 1 of 2) intron (NM_021795, intron 1 of 2) 2474 NM_021795 2005 Hs.497520 NM_001973 ENSG00000158711 ELK4 SAP1 ETS transcription factor ELK4 protein-coding chr10-2146 chr10 71793450 71793660 + 10.6 0.000 exon (NM_022124, exon 46 of 68) exon (NM_022124, exon 46 of 68) -2216 NM_001171934 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr22-2669 chr22 36415889 36416099 + 10.6 0.000 Intergenic AluSp|SINE|Alu -27927 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr6-1829 chr6 151324349 151324559 + 10.6 0.000 intron (NM_005100, intron 3 of 4) intron (NM_005100, intron 3 of 4) -1077 NM_144497 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr2-14355 chr2 218742396 218742606 + 10.6 0.000 intron (NM_014640, intron 5 of 19) MIR3|SINE|MIR 31666 NM_014640 9654 Hs.471405 NM_014640 ENSG00000135912 TTLL4 - tubulin tyrosine ligase like 4 protein-coding chr9-2519 chr9 114574521 114574731 + 10.6 0.000 Intergenic MER92C|LTR|ERV1 -13143 NM_004888 9550 Hs.388654 NM_004888 ENSG00000136888 ATP6V1G1 ATP6G|ATP6G1|ATP6GL|ATP6J|Vma10 ATPase H+ transporting V1 subunit G1 protein-coding chr17-3361 chr17 79174733 79174943 + 10.6 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 99901 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr22-1419 chr22 42365300 42365510 + 10.6 0.000 intron (NR_120595, intron 1 of 1) intron (NR_120595, intron 1 of 1) 3803 NR_120596 102723775 Hs.335413 NR_120595 ENSG00000229891 LINC01315 C22orf32-1|lnc-C22orf32-1 long intergenic non-protein coding RNA 1315 ncRNA chr2-3089 chr2 118474244 118474454 + 10.6 0.000 Intergenic MIRb|SINE|MIR 128617 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr18-591 chr18 44537644 44537854 + 10.6 0.000 intron (NR_131768, intron 1 of 4) intron (NR_131768, intron 1 of 4) 5970 NR_131768 105667213 Hs.135737 NR_131768 LINC01601 - long intergenic non-protein coding RNA 1601 ncRNA chr13-1221 chr13 75639734 75639944 + 10.6 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 3509 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr7-2728 chr7 39709891 39710101 + 10.6 0.000 Intergenic Intergenic -23572 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr12-2775 chr12 56898130 56898340 + 10.6 0.000 Intergenic Intergenic 36173 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chr4-1330 chr4 151408767 151408977 + 10.6 0.000 promoter-TSS (NM_001348694) promoter-TSS (NM_001348694) -304 NM_001348694 729830 Hs.633810 NM_001109977 ENSG00000164142 FAM160A1 - family with sequence similarity 160 member A1 protein-coding chr19-5045 chr19 49331652 49331862 + 10.6 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -3649 NM_001040031 951 Hs.166556 NM_001774 ENSG00000104894 CD37 GP52-40|TSPAN26 CD37 molecule protein-coding chr11-4754 chr11 111144706 111144916 + 10.6 0.000 Intergenic Intergenic -47493 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr2-2585 chr2 236862984 236863194 + 10.6 0.000 Intergenic Intergenic 193078 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr3-9985 chr3 98875564 98875774 + 10.6 0.000 intron (NM_080927, intron 2 of 15) L1MC4a|LINE|L1 26026 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr12-3705 chr12 4203954 4204164 + 10.6 0.000 Intergenic Intergenic -69703 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chr3-6900 chr3 156255445 156255655 + 10.6 0.000 intron (NM_003471, intron 1 of 13) L2c|LINE|L2 -27667 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr1-5837 chr1 230867229 230867439 + 10.6 0.000 intron (NM_001136494, intron 3 of 5) intron (NM_001136494, intron 3 of 5) 1222 NM_032800 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr11-10598 chr11 124159391 124159601 + 10.6 0.000 Intergenic MIRc|SINE|MIR -25720 NM_001355213 26497 Hs.538726 NM_001355213 ENSG00000197309 OR10D3 HTPCRX09|OR10D3P olfactory receptor family 10 subfamily D member 3 (putative) protein-coding chr1-3103 chr1 36024843 36025053 + 10.6 0.000 intron (NM_177422, intron 9 of 16) intron (NM_177422, intron 9 of 16) -59146 NM_014466 27285 Hs.127111 NM_014466 ENSG00000092850 TEKT2 TEKTB1|TEKTIN-T|h-tektin-t tektin 2 protein-coding chr5-4585 chr5 27403521 27403731 + 10.6 0.000 Intergenic L1MEf|LINE|L1 -68666 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr18-1226 chr18 42917587 42917797 + 10.6 0.000 intron (NM_002930, intron 4 of 4) L2a|LINE|L2 197993 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr5-7611 chr5 44454892 44455102 + 10.6 0.000 Intergenic MER61-int|LTR|ERV1 55285 NR_131946 102723839 Hs.561412 NR_131946 LINC02224 BRCAT107 long intergenic non-protein coding RNA 2224 ncRNA chr2-7320 chr2 240795271 240795481 + 10.6 0.000 intron (NM_004321, intron 2 of 46) intron (NM_004321, intron 2 of 46) 24843 NM_001320705 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr16-6009 chr16 8612690 8612900 + 10.6 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -8903 NM_024109 79091 Hs.306380 NM_024109 ENSG00000067365 METTL22 C16orf68 methyltransferase like 22 protein-coding chr22-1128 chr22 41092424 41092634 + 10.6 0.000 promoter-TSS (NM_001362843) promoter-TSS (NM_001362843) 16 NR_031694 100302237 NR_031694 ENSG00000284015 MIR1281 MIRN1281|hsa-mir-1281 microRNA 1281 ncRNA chr9-4891 chr9 6110801 6111011 + 10.6 0.000 Intergenic Intergenic -95282 NM_012416 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr7-3183 chr7 101528008 101528218 + 10.6 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 40893 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr3-8148 chr3 29682726 29682936 + 10.6 0.000 intron (NM_001003792, intron 4 of 13) intron (NM_001003792, intron 4 of 13) 251325 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr22-703 chr22 41418082 41418292 + 10.6 0.000 Intergenic Intergenic 28614 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding chr3-7685 chr3 42879397 42879607 + 10.6 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -3623 NM_004391 1582 Hs.447793 NM_004391 ENSG00000180432 CYP8B1 CP8B|CYP12 cytochrome P450 family 8 subfamily B member 1 protein-coding chr6-2456 chr6 24313454 24313664 + 10.6 0.000 intron (NM_016356, intron 2 of 9) intron (NM_016356, intron 2 of 9) -43344 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr5-2880 chr5 95081644 95081854 + 10.6 0.000 5' UTR (NM_001002796, exon 1 of 23) 5' UTR (NM_001002796, exon 1 of 23) 117 NM_001002796 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr5-6689 chr5 63165265 63165475 + 10.6 0.000 Intergenic Intergenic 586551 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr3-3658 chr3 128826707 128826917 + 10.6 0.000 Intergenic HERVL-int|LTR|ERVL -19996 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr19-2193 chr19 18288940 18289150 + 10.6 0.000 Intergenic AluY|SINE|Alu 6968 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA chr3-6645 chr3 127881258 127881468 + 10.6 0.000 Intergenic Charlie3|DNA|hAT-Charlie -33869 NM_001370224 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr17-5879 chr17 69469075 69469285 + 10.6 0.000 intron (NM_002758, intron 1 of 11) MLT1E2|LTR|ERVL-MaLR 16352 NR_145982 105371880 NR_145982 LOC105371880 - uncharacterized LOC105371880 ncRNA chr12-1274 chr12 79547910 79548120 + 10.6 0.000 Intergenic Intergenic 128758 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr11-10552 chr11 120885737 120885947 + 10.6 0.000 intron (NM_001282470, intron 10 of 19) intron (NM_001282470, intron 10 of 19) 8955 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr3-2777 chr3 178744596 178744806 + 10.6 0.000 intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 115704 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr2-7847 chr2 47957665 47957875 + 10.6 0.000 Intergenic L1MA1|LINE|L1 -51977 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr1-3797 chr1 12541783 12541993 + 10.6 0.000 Intergenic Intergenic 34642 NR_003022 677882 Hs.658450 NR_003022 ENSG00000266079 SNORA59B ACA59 small nucleolar RNA, H/ACA box 59B snoRNA chr17-3946 chr17 61862275 61862485 + 10.6 0.000 intron (NM_032043, intron 1 of 19) MIRb|SINE|MIR 1179 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding chr8-2033 chr8 106046052 106046262 + 10.6 0.000 intron (NR_125797, intron 1 of 4) intron (NR_125797, intron 1 of 4) 14346 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr17-1581 chr17 43520708 43520918 + 10.6 0.000 exon (NM_001302623, exon 20 of 23) exon (NM_001302623, exon 20 of 23) 9622 NM_001261439 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr12-6614 chr12 130836445 130836655 + 10.6 0.000 intron (NM_001351051, intron 1 of 10) AluJb|SINE|Alu 2700 NM_001351050 2054 Hs.437585 NM_001980 ENSG00000111450 STX2 EPIM|EPM|STX2A|STX2B|STX2C syntaxin 2 protein-coding chr22-1385 chr22 37291544 37291754 + 10.6 0.000 intron (NM_013385, intron 1 of 12) intron (NM_013385, intron 1 of 12) 9141 NM_013385 27128 Hs.170944 NM_013385 ENSG00000100055 CYTH4 CYT4|DJ63G5.1|PSCD4|cytohesin-4 cytohesin 4 protein-coding chr2-5435 chr2 120537937 120538147 + 10.6 0.000 Intergenic Intergenic -71693 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr13-3381 chr13 81879517 81879727 + 10.6 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -652639 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr7-3635 chr7 42199182 42199392 + 10.6 0.000 intron (NM_000168, intron 2 of 14) intron (NM_000168, intron 2 of 14) 37922 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr18-1847 chr18 23538172 23538382 + 10.6 0.000 intron (NM_000271, intron 20 of 24) intron (NM_000271, intron 20 of 24) 34766 NM_013326 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr10-4150 chr10 84493659 84493869 + 10.6 0.000 intron (NM_001284240, intron 9 of 9) MER1A|DNA|hAT-Charlie 68595 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr5-6010 chr5 149411998 149412208 + 10.6 0.000 intron (NR_105060, intron 1 of 4) intron (NR_105060, intron 1 of 4) 5258 NR_105060 728264 Hs.519666 NR_027180 CARMN CARMEN|MIR143HG cardiac mesoderm enhancer-associated non-coding RNA ncRNA chr4-5167 chr4 156930181 156930391 + 10.6 0.000 intron (NR_036641, intron 1 of 6) L2b|LINE|L2 41513 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr6-4151 chr6 314314 314524 + 10.6 0.000 intron (NR_104473, intron 3 of 5) intron (NR_104473, intron 3 of 5) 22362 NM_001286555 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr11-4417 chr11 86660077 86660287 + 10.6 0.000 intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 12016 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr8-3750 chr8 22930439 22930649 + 10.6 0.000 intron (NM_001363233, intron 1 of 6) intron (NM_001363233, intron 1 of 6) -2630 NM_144962 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr14-4133 chr14 73201422 73201632 + 10.6 0.000 intron (NM_000021, intron 8 of 11) intron (NM_000021, intron 8 of 11) -35979 NR_158677 89932 Hs.509909 NM_173462 ENSG00000100767 PAPLN PPN papilin, proteoglycan like sulfated glycoprotein protein-coding chr7-4967 chr7 149731492 149731702 + 10.6 0.000 intron (NM_032534, intron 15 of 16) intron (NM_032534, intron 15 of 16) 16586 NM_032534 84626 Hs.299560 NM_032534 ENSG00000133619 KRBA1 - KRAB-A domain containing 1 protein-coding chr11-5516 chr11 85953966 85954176 + 10.6 0.000 Intergenic Intergenic 98970 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr12-1899 chr12 69252097 69252307 + 10.6 0.000 intron (NM_007007, intron 2 of 9) AluJr4|SINE|Alu 12633 NM_007007 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr1-13942 chr1 23899068 23899278 + 10.6 0.000 intron (NM_001841, intron 1 of 1) MIRb|SINE|MIR 14189 NM_001841 1269 Hs.73037 NM_001841 ENSG00000188822 CNR2 CB-2|CB2|CX5 cannabinoid receptor 2 protein-coding chr10-2442 chr10 5758918 5759128 + 10.6 0.000 intron (NM_017782, intron 18 of 20) intron (NM_017782, intron 18 of 20) 54411 NM_001494 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr14-1347 chr14 90714914 90715124 + 10.6 0.000 intron (NM_001320421, intron 5 of 20) HAL1M8|LINE|L1 17686 NR_135190 105370622 Hs.662373 NR_135190 ENSG00000258716 LOC105370622 - uncharacterized LOC105370622 ncRNA chr17-2829 chr17 17361933 17362143 + 10.6 0.000 Intergenic Intergenic 58665 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr19-4713 chr19 18939517 18939727 + 10.6 0.000 promoter-TSS (NM_001145724) promoter-TSS (NM_001145724) 13 NR_027297 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr1-14849 chr1 76955887 76956097 + 10.6 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 88512 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr11-2159 chr11 75100427 75100637 + 10.6 0.000 Intergenic Intergenic -3642 NM_001005285 341152 Hs.554515 NM_001005285 ENSG00000171561 OR2AT4 OR11-265 olfactory receptor family 2 subfamily AT member 4 protein-coding chr11-5578 chr11 106791293 106791503 + 10.6 0.000 intron (NM_001256424, intron 5 of 8) L1M1|LINE|L1 227078 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr9-5455 chr9 98262149 98262359 + 10.6 0.000 Intergenic L1MA10|LINE|L1 -6605 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr5-6936 chr5 138601428 138601638 + 10.6 0.000 Intergenic L2c|LINE|L2 -26132 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr17-4145 chr17 82386984 82387194 + 10.6 0.000 Intergenic Intergenic 12812 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr3-3851 chr3 34784040 34784250 + 10.6 0.000 Intergenic Intergenic 609878 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr4-4433 chr4 52369632 52369842 + 10.6 0.000 Intergenic Intergenic 286802 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding chr12-1519 chr12 67647974 67648184 + 10.6 0.000 promoter-TSS (NM_003583) promoter-TSS (NM_003583) -666 NM_006482 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr21-341 chr21 32371819 32372029 + 10.6 0.000 intron (NM_014825, intron 8 of 38) intron (NM_014825, intron 8 of 38) 5398 NR_002996 677846 Hs.712293 NR_002996 ENSG00000200792 SNORA80A ACA67|SNORA80 small nucleolar RNA, H/ACA box 80A snoRNA chr16-4466 chr16 56241689 56241899 + 10.6 0.000 intron (NM_138736, intron 2 of 7) intron (NM_138736, intron 2 of 7) -3726 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr19-1219 chr19 7883866 7884076 + 10.6 0.000 Intergenic Intergenic -3739 NR_033250 388499 Hs.730360 NR_033250 LYPLA2P2 - LYPLA2 pseudogene 2 pseudo chr15-3333 chr15 80632877 80633087 + 10.6 0.000 Intergenic Intergenic 51879 NR_049837 100847042 NR_049837 ENSG00000284059 MIR5572 - microRNA 5572 ncRNA chr18-995 chr18 28003603 28003813 + 10.6 0.000 intron (NM_001308176, intron 5 of 14) intron (NM_001308176, intron 5 of 14) 32933 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr7-6200 chr7 130680861 130681071 + 10.6 0.000 exon (NM_001304968, exon 5 of 9) exon (NM_001304968, exon 5 of 9) 5579 NM_052933 114960 Hs.592266 NM_052933 ENSG00000213265 TSGA13 - testis specific 13 protein-coding chr2-4912 chr2 150521295 150521505 + 10.6 0.000 Intergenic Intergenic -33705 NM_001254738 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr8-5012 chr8 3887495 3887705 + 10.6 0.000 intron (NM_033225, intron 5 of 69) MER5B|DNA|hAT-Charlie 1107314 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr7-6396 chr7 153018693 153018903 + 10.6 0.000 Intergenic Intergenic 259046 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr4-4328 chr4 33302316 33302526 + 10.6 0.000 Intergenic MamRep1527|LTR|LTR 737472 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr9-6720 chr9 6655092 6655302 + 10.6 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -9505 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr17-6834 chr17 15462953 15463163 + 10.6 0.000 intron (NM_001204477, intron 1 of 3) intron (NM_001204477, intron 1 of 3) 4563 NM_001204477 284040 Hs.164595 NM_173622 ENSG00000239704 CDRT4 - CMT1A duplicated region transcript 4 protein-coding chr20-878 chr20 19275511 19275721 + 10.6 0.000 intron (NR_024564, intron 2 of 7) intron (NR_024564, intron 2 of 7) 8980 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr5-3396 chr5 142685505 142685715 + 10.6 0.000 promoter-TSS (NM_001257209) promoter-TSS (NM_001257209) 70 NM_001354956 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr14-2910 chr14 38943513 38943723 + 10.6 0.000 Intergenic L2|LINE|L2 -26736 NR_039982 283547 Hs.675941 NR_039982 ENSG00000259070 LINC00639 - long intergenic non-protein coding RNA 639 ncRNA chrX-2451 chrX 81409346 81409556 + 10.6 0.000 Intergenic MIR|SINE|MIR 207349 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr12-1517 chr12 64676873 64677083 + 10.6 0.000 intron (NR_040718, intron 1 of 3) AluJo|SINE|Alu -54373 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr2-6948 chr2 114550481 114550691 + 10.6 0.000 intron (NM_001321908, intron 2 of 25) intron (NM_001321908, intron 2 of 25) 89009 NM_001321908 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr4-3402 chr4 43886065 43886275 + 10.6 0.000 Intergenic L1MC1|LINE|L1 -130691 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr10-2082 chr10 110568371 110568581 + 10.6 0.000 intron (NM_005445, intron 1 of 28) intron (NM_005445, intron 1 of 28) 785 NM_005445 9126 Hs.24485 NM_005445 ENSG00000108055 SMC3 BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1 structural maintenance of chromosomes 3 protein-coding chrX-2854 chrX 140464395 140464605 + 10.6 0.000 Intergenic L2b|LINE|L2 40560 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr14-3173 chr14 70100679 70100889 + 10.6 0.000 intron (NM_033262, intron 2 of 7) MIRc|SINE|MIR -20567 NM_001130417 6547 Hs.337696 NM_033262 ENSG00000100678 SLC8A3 NCX3 solute carrier family 8 member A3 protein-coding chr10-7360 chr10 1162075 1162285 + 10.6 0.000 intron (NR_015376, intron 2 of 2) intron (NR_015376, intron 2 of 2) 2412 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr7-4326 chr7 39120902 39121112 + 10.6 0.000 intron (NM_001370959, intron 2 of 9) intron (NM_001370959, intron 2 of 9) -107440 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr1-4765 chr1 10034394 10034604 + 10.6 0.000 intron (NM_006048, intron 1 of 26) intron (NM_006048, intron 1 of 26) 1541 NM_006048 10277 Hs.593974 NM_006048 ENSG00000130939 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding chr1-4918 chr1 42335889 42336099 + 10.6 0.000 promoter-TSS (NM_001198852) promoter-TSS (NM_001198852) -114 NM_001198850 22887 Hs.26023 NM_014947 ENSG00000198815 FOXJ3 - forkhead box J3 protein-coding chr9-2773 chr9 109652917 109653127 + 10.6 0.000 intron (NM_001037293, intron 1 of 6) intron (NM_001037293, intron 1 of 6) 12234 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr1-9429 chr1 33248070 33248280 + 10.6 0.000 Intergenic MIRc|SINE|MIR -8317 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr11-7152 chr11 127228933 127229143 + 10.6 0.000 Intergenic Intergenic -42032 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr17-1300 chr17 49576756 49576966 + 10.6 0.000 intron (NM_007225, intron 1 of 1) CpG 990 NM_007225 11248 Hs.55069 NM_007225 ENSG00000182575 NXPH3 NPH3 neurexophilin 3 protein-coding chr6-3263 chr6 150361449 150361659 + 10.6 0.000 Intergenic Intergenic -7458 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr2-5153 chr2 27470611 27470821 + 10.6 0.000 intron (NM_015662, intron 16 of 47) intron (NM_015662, intron 16 of 47) 19027 NM_015662 26160 Hs.127401 NM_015662 ENSG00000138002 IFT172 BBS20|NPHP17|RP71|SLB|SRTD10|osm-1|wim intraflagellar transport 172 protein-coding chr3-7014 chr3 171111680 171111890 + 10.6 0.000 intron (NM_001161563, intron 17 of 31) L1M2|LINE|L1 -5026 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr4-3146 chr4 180828524 180828734 + 10.6 0.000 Intergenic Intergenic 330520 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr12-3767 chr12 51302369 51302579 + 10.6 0.000 5' UTR (NM_001290009, exon 4 of 12) 5' UTR (NM_001290009, exon 4 of 12) 21700 NM_016293 51411 Hs.14770 NM_016293 ENSG00000110934 BIN2 BRAP-1 bridging integrator 2 protein-coding chr13-1449 chr13 72754578 72754788 + 10.6 0.000 3' UTR (NM_001322348, exon 20 of 20) 3' UTR (NM_001322348, exon 20 of 20) 26760 NM_001286746 79866 Hs.643464 NM_024808 ENSG00000136122 BORA C13orf34 BORA aurora kinase A activator protein-coding chr14-1558 chr14 69373121 69373331 + 10.6 0.000 Intergenic Intergenic 25073 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr22-1938 chr22 46682981 46683191 + 10.6 0.000 TTS (NM_001366660) TTS (NM_001366660) 55166 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr22-2766 chr22 41057278 41057488 + 10.6 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 16338 NR_132979 106635682 NR_132979 SNORD140 - small nucleolar RNA, C/D box 140 snoRNA chr10-6018 chr10 125555229 125555439 + 10.6 0.000 Intergenic Intergenic -19037 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr9-3330 chr9 96061577 96061787 + 10.6 0.000 Intergenic Intergenic -4157 NR_033838 158435 Hs.652615 NR_033838 LOC158435 - uncharacterized LOC158435 ncRNA chr20-1416 chr20 34772574 34772784 + 10.6 0.000 intron (NM_001242539, intron 2 of 11) intron (NM_001242539, intron 2 of 11) 9725 NM_001242539 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding chr6-3370 chr6 38990617 38990827 + 10.6 0.000 intron (NM_001371, intron 87 of 91) intron (NM_001371, intron 87 of 91) -37615 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr6-592 chr6 4775863 4776073 + 10.6 0.000 promoter-TSS (NM_004824) promoter-TSS (NM_004824) -436 NM_001368126 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr19-2764 chr19 42025050 42025260 + 10.6 0.000 intron (NM_002088, intron 11 of 18) intron (NM_002088, intron 11 of 18) -30925 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr13-2097 chr13 77830981 77831191 + 10.6 0.000 intron (NR_103853, intron 4 of 6) AluSx1|SINE|Alu 12149 NR_103853 100505518 Hs.742215 NR_103853 EDNRB-AS1 - EDNRB antisense RNA 1 ncRNA chr4-4636 chr4 80806475 80806685 + 10.6 0.000 intron (NM_001206997, intron 4 of 6) L2a|LINE|L2 -224128 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr16-6706 chr16 71596427 71596637 + 10.6 0.000 Intergenic L1PB1|LINE|L1 -19440 NM_000353 6898 Hs.161640 NM_000353 ENSG00000198650 TAT - tyrosine aminotransferase protein-coding chr3-6795 chr3 144225063 144225273 + 10.6 0.000 Intergenic Intergenic 252087 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr20-1031 chr20 36573255 36573465 + 10.6 0.000 promoter-TSS (NR_109939) promoter-TSS (NR_109939) -85 NR_109939 101926987 Hs.647444 NR_109939 ENSG00000232907 DLGAP4-AS1 CCAT7 DLGAP4 antisense RNA 1 ncRNA chr19-4490 chr19 5816096 5816306 + 10.6 0.000 Intergenic L1MC4a|LINE|L1 -7601 NM_004558 4902 Hs.234775 NM_004558 ENSG00000171119 NRTN NTN neurturin protein-coding chr6-1330 chr6 26195371 26195581 + 10.6 0.000 Intergenic Intergenic 3817 NM_021065 3013 Hs.626666 NM_021065 ENSG00000196866 HIST1H2AD H2A.3|H2A/g|H2AFG histone cluster 1 H2A family member d protein-coding chr11-3914 chr11 120384574 120384784 + 10.6 0.000 promoter-TSS (NM_001301084) promoter-TSS (NM_001301084) -648 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr12-6910 chr12 23841638 23841848 + 10.6 0.000 intron (NM_152989, intron 6 of 17) L1MC3|LINE|L1 107927 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr1-7321 chr1 2344083 2344293 + 10.6 0.000 intron (NM_024848, intron 10 of 13) intron (NM_024848, intron 10 of 13) 8473 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr7-4395 chr7 93809613 93809823 + 10.6 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 81035 NM_001271004 7980 Hs.438231 NM_006528 ENSG00000105825 TFPI2 PP5|REF1|TFPI-2 tissue factor pathway inhibitor 2 protein-coding chr7-6080 chr7 116135467 116135677 + 10.6 0.000 Intergenic Intergenic -74967 NM_015641 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr2-7829 chr2 46632397 46632607 + 10.6 0.000 Intergenic MamRep564|Unknown|Unknown 15287 NM_014171 9419 Hs.133998 NM_014171 ENSG00000119878 CRIPT HSPC139|SSMDF CXXC repeat containing interactor of PDZ3 domain protein-coding chr3-5223 chr3 87739304 87739514 + 10.6 0.000 Intergenic Harlequin-int|LTR|ERV1 -53297 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr1-3945 chr1 101236046 101236256 + 10.6 0.000 promoter-TSS (NM_001400) promoter-TSS (NM_001400) 377 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr17-3070 chr17 81735360 81735570 + 10.6 0.000 Intergenic Intergenic 23181 NM_012140 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr22-1138 chr22 43979567 43979777 + 10.6 0.000 intron (NM_015380, intron 10 of 14) intron (NM_015380, intron 10 of 14) -19539 NM_001003828 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr17-4640 chr17 14493462 14493672 + 10.6 0.000 Intergenic L1MB8|LINE|L1 189827 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr17-3784 chr17 39096707 39096917 + 10.6 0.000 intron (NM_020405, intron 7 of 13) MamRep434|DNA|TcMar-Tigger 39793 NR_036551 100131347 Hs.676510 NR_036551 ENSG00000263818 RDM1P5 - RDM1 pseudogene 5 pseudo chr16-5927 chr16 3480775 3480985 + 10.6 0.000 intron (NM_001317094, intron 3 of 3) AluSx3|SINE|Alu 4589 NR_106741 102465134 NR_106741 ENSG00000273776 MIR6126 hsa-mir-6126 microRNA 6126 ncRNA chr6-8425 chr6 151415608 151415818 + 10.6 0.000 intron (NM_001271937, intron 9 of 10) AluY|SINE|Alu -24154 NM_020861 57621 Hs.520073 NM_020861 ENSG00000181472 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding chr1-6626 chr1 43445037 43445247 + 10.6 0.000 intron (NM_015284, intron 61 of 70) intron (NM_015284, intron 61 of 70) -3397 NR_106793 102465440 NR_106793 ENSG00000274975 MIR6735 hsa-mir-6735 microRNA 6735 ncRNA chr5-3129 chr5 57621602 57621812 + 10.6 0.000 Intergenic Intergenic -28953 NR_104668 101928505 Hs.119998 NR_104668 LOC101928505 - uncharacterized LOC101928505 ncRNA chr2-8719 chr2 158023922 158024132 + 10.6 0.000 intron (NM_001135098, intron 2 of 8) MER5A|DNA|hAT-Charlie 28848 NM_001135098 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr11-2210 chr11 62694808 62695018 + 10.6 0.000 intron (NM_001122955, intron 3 of 10) intron (NM_001122955, intron 3 of 10) -5383 NM_203422 221091 Hs.427449 NM_203422 ENSG00000177363 LRRN4CL - LRRN4 C-terminal like protein-coding chr13-2129 chr13 97295753 97295963 + 10.6 0.000 intron (NM_144778, intron 2 of 8) intron (NM_144778, intron 2 of 8) 73525 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr1-7476 chr1 87754344 87754554 + 10.6 0.000 Intergenic L2a|LINE|L2 -382794 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr8-2419 chr8 94165142 94165352 + 10.6 0.000 intron (NM_001144663, intron 10 of 17) LTR16B2|LTR|ERVL 43308 NM_004063 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding chr1-4345 chr1 67682666 67682876 + 10.6 0.000 Intergenic Intergenic -2430 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr20-2418 chr20 22507682 22507892 + 10.6 0.000 Intergenic Intergenic 70855 NR_001558 140828 Hs.9842 NR_001558 ENSG00000259974 LINC00261 ALIEN|C20orf56|DEANR1|FALCOR|HCCDR1|NCRNA00261|TCONS_00027846|onco-lncRNA-17 long intergenic non-protein coding RNA 261 ncRNA chr2-3514 chr2 230068658 230068868 + 10.6 0.000 5' UTR (NM_152527, exon 1 of 5) 5' UTR (NM_152527, exon 1 of 5) 161 NM_152527 151473 Hs.504317 NM_152527 ENSG00000163053 SLC16A14 MCT14 solute carrier family 16 member 14 protein-coding chr15-1556 chr15 68700679 68700889 + 10.6 0.000 intron (NM_006091, intron 3 of 11) intron (NM_006091, intron 3 of 11) 59281 NM_001324015 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chrX-3450 chrX 23913472 23913682 + 10.6 0.000 intron (NM_001169574, intron 3 of 8) intron (NM_001169574, intron 3 of 8) 5571 NM_152761 254158 Hs.351265 NM_152761 ENSG00000165182 CXorf58 - chromosome X open reading frame 58 protein-coding chr9-6617 chr9 129795873 129796083 + 10.6 0.000 Intergenic Intergenic -7165 NR_133948 27348 Hs.252682 NM_014506 ENSG00000136816 TOR1B DQ1 torsin family 1 member B protein-coding chr17-2531 chr17 27456745 27456955 + 10.6 0.000 exon (NM_001367810, exon 1 of 19) exon (NM_001367810, exon 1 of 19) 402 NM_001367810 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chrX-1162 chrX 46208275 46208485 + 10.6 0.000 Intergenic Intergenic 119294 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr16-2217 chr16 87212148 87212358 + 10.6 0.000 intron (NR_110939, intron 1 of 2) intron (NR_110939, intron 1 of 2) 138 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr12-4536 chr12 25775986 25776196 + 10.6 0.000 Intergenic Intergenic 97988 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr12-4898 chr12 65721648 65721858 + 10.6 0.000 Intergenic Intergenic -79381 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr8-3805 chr8 28232732 28232942 + 10.6 0.000 Intergenic Intergenic -84431 NM_006228 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr11-4588 chr11 131094913 131095123 + 10.6 0.000 Intergenic MIRb|SINE|MIR -178531 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr2-6889 chr2 88658420 88658630 + 10.6 0.000 Intergenic Intergenic 30696 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 EIF2AK3-DT - EIF2AK3 divergent transcript ncRNA chr5-2133 chr5 81206975 81207185 + 10.6 0.000 intron (NM_006909, intron 20 of 26) intron (NM_006909, intron 20 of 26) -26240 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr18-2609 chr18 25247560 25247770 + 10.6 0.000 intron (NM_001308225, intron 2 of 6) intron (NM_001308225, intron 2 of 6) 104501 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr9-3718 chr9 113676520 113676730 + 10.6 0.000 Intergenic Intergenic 82496 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr14-2130 chr14 76812173 76812383 + 10.6 0.000 intron (NM_001370747, intron 1 of 11) CpG 604 NM_001370748 23357 Hs.497448 NM_015305 ENSG00000013523 ANGEL1 Ccr4e|KIAA0759 angel homolog 1 protein-coding chr18-2283 chr18 76740462 76740672 + 10.6 0.000 Intergenic Intergenic 50538 NR_122073 400661 Hs.514963 NR_122073 ENSG00000276397 LINC01879 - long intergenic non-protein coding RNA 1879 ncRNA chr3-8858 chr3 9778486 9778696 + 10.6 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -8644 NM_003656 8536 Hs.434875 NM_003656 ENSG00000134072 CAMK1 CAMKI calcium/calmodulin dependent protein kinase I protein-coding chr9-8134 chr9 101469046 101469256 + 10.6 0.000 promoter-TSS (NR_121574) promoter-TSS (NR_121574) -171 NR_121575 101928470 Hs.656088 NR_121573 ENSG00000225376 TMEM246-AS1 - TMEM246 antisense RNA 1 ncRNA chr1-5614 chr1 15000121 15000331 + 10.6 0.000 intron (NM_001370231, intron 3 of 8) MLT1D|LTR|ERVL-MaLR 54307 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr10-3341 chr10 13228357 13228567 + 10.6 0.000 intron (NM_001303119, intron 2 of 2) intron (NM_001303119, intron 2 of 2) 5912 NM_145314 221044 Hs.112998 NM_145314 ENSG00000165623 UCMA C10orf49|GRP|GRP/UCMA upper zone of growth plate and cartilage matrix associated protein-coding chr11-3461 chr11 69636568 69636778 + 10.6 0.000 Intergenic CpG -4432 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr6-5663 chr6 97494514 97494724 + 10.6 0.000 intron (NR_110757, intron 1 of 4) LTR16E2|LTR|ERVL 189033 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr18-1816 chr18 14252788 14252998 + 10.6 0.000 Intergenic Intergenic 73796 NR_040113 440482 Hs.632352 NM_001029999 ANKRD20A5P ANKRD20A5 ankyrin repeat domain 20 family member A5, pseudogene pseudo chr8-4576 chr8 127947871 127948081 + 10.6 0.000 non-coding (NR_103558, exon 1 of 1) non-coding (NR_103558, exon 1 of 1) 747 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr9-3362 chr9 118167142 118167352 + 10.6 0.000 Intergenic L1ME3A|LINE|L1 462844 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr9-5454 chr9 98219043 98219253 + 10.6 0.000 intron (NR_051978, intron 5 of 11) intron (NR_051978, intron 5 of 11) -5597 NM_001267572 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr2-9518 chr2 237707705 237707915 + 10.6 0.000 intron (NM_001137551, intron 1 of 11) L3|LINE|CR1 15605 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr12-1971 chr12 121009832 121010042 + 10.6 0.000 intron (NM_001286197, intron 2 of 4) intron (NM_001286197, intron 2 of 4) 6550 NM_001286195 64897 Hs.528671 NM_022895 ENSG00000157895 C12orf43 Custos chromosome 12 open reading frame 43 protein-coding chrX-4570 chrX 70344680 70344890 + 10.6 0.000 intron (NM_012310, intron 13 of 30) intron (NM_012310, intron 13 of 30) 54681 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chr1-6470 chr1 20618108 20618318 + 10.6 0.000 intron (NM_001785, intron 3 of 3) intron (NM_001785, intron 3 of 3) -15245 NM_032409 65018 Hs.389171 NM_032409 ENSG00000158828 PINK1 BRPK|PARK6 PTEN induced kinase 1 protein-coding chr11-3964 chr11 1303172 1303382 + 10.6 0.000 promoter-TSS (NM_001318514) promoter-TSS (NM_001318514) -487 NM_001318514 54472 Hs.368527 NM_019009 ENSG00000078902 TOLLIP IL-1RAcPIP toll interacting protein protein-coding chr17-2393 chr17 79708535 79708745 + 10.6 0.000 non-coding (NR_109783, exon 2 of 2) non-coding (NR_109783, exon 2 of 2) 1374 NR_109783 100652929 Hs.559249 NR_109783 ENSG00000267719 LINC02078 HP09025 long intergenic non-protein coding RNA 2078 ncRNA chr5-3918 chr5 171893569 171893779 + 10.6 0.000 intron (NM_012300, intron 5 of 12) intron (NM_012300, intron 5 of 12) 107802 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr2-14457 chr2 223532175 223532385 + 10.6 0.000 Intergenic Intergenic 70081 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr1-9892 chr1 69127414 69127624 + 10.6 0.000 intron (NR_146608, intron 3 of 4) L2a|LINE|L2 71621 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr11-6872 chr11 101862502 101862712 + 10.6 0.000 Intergenic Intergenic -52403 NM_001363543 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr1-10852 chr1 204623281 204623491 + 10.6 0.000 intron (NM_201630, intron 1 of 1) intron (NM_201630, intron 1 of 1) 62352 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr11-5658 chr11 126386595 126386805 + 10.6 0.000 intron (NM_001348396, intron 2 of 11) intron (NM_001348396, intron 2 of 11) -16716 NM_001254758 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr9-4769 chr9 133607833 133608043 + 10.6 0.000 Intergenic Intergenic -27692 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr5-5496 chr5 141669587 141669797 + 10.6 0.000 intron (NM_022481, intron 16 of 32) intron (NM_022481, intron 16 of 32) 12538 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr19-5037 chr19 48760243 48760453 + 10.6 0.000 Intergenic AluSz|SINE|Alu 4824 NM_019113 26291 Hs.283015 NM_019113 ENSG00000105550 FGF21 - fibroblast growth factor 21 protein-coding chr14-1403 chr14 56728826 56729036 + 10.6 0.000 Intergenic AluSx|SINE|Alu 76736 NM_001270525 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding chr12-5871 chr12 50451244 50451454 + 10.6 0.000 intron (NM_001352308, intron 8 of 14) L1MA7|LINE|L1 -5222 NR_132753 106633800 NR_132753 SNORD133 ZL142|ZL42|ggn68 small nucleolar RNA, C/D box 133 snoRNA chr10-2083 chr10 111188372 111188582 + 10.6 0.000 Intergenic Intergenic 74186 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chrX-1950 chrX 7069043 7069253 + 10.6 0.000 intron (NM_001178135, intron 3 of 3) intron (NM_001178135, intron 3 of 3) -78142 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chrX-328 chrX 53088646 53088856 + 10.6 0.000 TTS (NM_022117) TTS (NM_022117) -5406 NR_110456 102723508 Hs.633244 NR_110456 KANTR LINC01155|Spasm KDM5C adjacent transcript ncRNA chr12-806 chr12 56789403 56789613 + 10.6 0.000 Intergenic SVA_D|Retroposon|SVA 26184 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr16-4424 chr16 52429489 52429699 + 10.6 0.000 Intergenic Intergenic 117549 NM_001080430 27324 Hs.132574 NM_001080430 ENSG00000103460 TOX3 CAGF9|TNRC9 TOX high mobility group box family member 3 protein-coding chr14-2351 chr14 22273220 22273430 + 10.6 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 159428 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chrX-4430 chrX 54361530 54361740 + 10.6 0.000 Intergenic MamGypLTR1d|LTR|Gypsy -3589 NM_001002838 65267 Hs.92423 NM_020922 ENSG00000196632 WNK3 PRKWNK3 WNK lysine deficient protein kinase 3 protein-coding chr22-2762 chr22 40695961 40696171 + 10.6 0.000 Intergenic Intergenic 16888 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr3-3403 chr3 73002427 73002637 + 10.6 0.000 intron (NM_001318025, intron 2 of 7) AluJr4|SINE|Alu 5721 NM_001318027 151987 Hs.431092 NM_174907 ENSG00000163605 PPP4R2 PP4R2 protein phosphatase 4 regulatory subunit 2 protein-coding chr15-1301 chr15 48355233 48355443 + 10.6 0.000 Intergenic OldhAT1|DNA|hAT-Ac 23141 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr11-5809 chr11 6652415 6652625 + 10.6 0.000 intron (NM_003737, intron 1 of 20) L2c|LINE|L2 3289 NM_003737 8642 Hs.199850 NM_003737 ENSG00000166341 DCHS1 CDH19|CDH25|CDHR6|FIB1|MVP2|PCDH16|VMLDS1 dachsous cadherin-related 1 protein-coding chr5-3744 chr5 38994418 38994628 + 10.6 0.000 intron (NM_001285439, intron 6 of 38) intron (NM_001285439, intron 6 of 38) 79876 NM_001285440 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr3-6062 chr3 50897520 50897730 + 10.6 0.000 intron (NM_004947, intron 4 of 52) L1PA7|LINE|L1 222545 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr15-3557 chr15 27707397 27707607 + 10.6 0.000 Intergenic Intergenic 391813 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr5-2735 chr5 133468462 133468672 + 10.6 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) -40861 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr12-1258 chr12 49861085 49861295 + 10.6 0.000 Intergenic SVA_D|Retroposon|SVA -18084 NM_181708 144233 Hs.142736 NM_181708 ENSG00000186666 BCDIN3D - BCDIN3 domain containing RNA methyltransferase protein-coding chr1-13053 chr1 173791498 173791708 + 10.6 0.000 Intergenic 7SK|RNA|RNA 32529 NM_001171182 91687 Hs.531856 NM_033319 ENSG00000120334 CENPL C1orf155|CENP-L|dJ383J4.3 centromere protein L protein-coding chrX-2309 chrX 54702900 54703110 + 10.6 0.000 Intergenic L1PB4|LINE|L1 95250 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr4-4554 chr4 73152419 73152629 + 10.6 0.000 intron (NM_032217, intron 6 of 33) intron (NM_032217, intron 6 of 33) 70533 NM_001286771 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chr4-4241 chr4 17884698 17884908 + 10.6 0.000 intron (NM_001365662, intron 5 of 5) intron (NM_001365662, intron 5 of 5) 73824 NR_073124 64151 Hs.567567 NM_022346 ENSG00000109805 NCAPG CAPG|CHCG|NY-MEL-3|YCG1 non-SMC condensin I complex subunit G protein-coding chr10-2179 chr10 80158 80368 + 10.6 0.000 Intergenic Intergenic -31025 NM_177987 347688 Hs.532659 NM_177987 ENSG00000261456 TUBB8 OOMD|OOMD2|bA631M21.2 tubulin beta 8 class VIII protein-coding chr4-1389 chr4 146521860 146522070 + 10.6 0.000 promoter-TSS (NM_001300842) promoter-TSS (NM_001300842) 6 NM_032128 84068 Hs.659209 NM_032128 ENSG00000120519 SLC10A7 C4orf13|P7|SSASKS solute carrier family 10 member 7 protein-coding chr6-5124 chr6 121748449 121748659 + 10.6 0.000 Intergenic LTR78|LTR|ERV1 312908 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr2-12524 chr2 65570388 65570598 + 10.6 0.000 Intergenic L1PA15|LINE|L1 -137894 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr22-2029 chr22 39122028 39122238 + 10.6 0.000 Intergenic AluJr4|SINE|Alu 24889 NM_001166002 164668 Hs.440515 NM_181773 ENSG00000100298 APOBEC3H A3H|ARP-10|ARP10 apolipoprotein B mRNA editing enzyme catalytic subunit 3H protein-coding chr11-4055 chr11 14585126 14585336 + 10.6 0.000 intron (NM_148976, intron 2 of 10) intron (NM_148976, intron 2 of 10) 58403 NM_148976 5682 Hs.102798 NM_002786 ENSG00000129084 PSMA1 HC2|HEL-S-275|NU|PROS30 proteasome subunit alpha 1 protein-coding chr13-2835 chr13 108122733 108122943 + 10.6 0.000 Intergenic MLT1F-int|LTR|ERVL-MaLR 91944 NM_002312 3981 Hs.166091 NM_002312 ENSG00000174405 LIG4 LIG4S DNA ligase 4 protein-coding chr2-3455 chr2 121217424 121217634 + 10.6 0.000 3' UTR (NM_014553, exon 15 of 15) 3' UTR (NM_014553, exon 15 of 15) 67673 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr10-6437 chr10 24095766 24095976 + 10.6 0.000 intron (NM_001098500, intron 2 of 18) AluJr|SINE|Alu -112920 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr11-6866 chr11 101430331 101430541 + 10.6 0.000 Intergenic LTR16B|LTR|ERVL 89469 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr14-4705 chr14 58501273 58501483 + 10.6 0.000 intron (NM_001329944, intron 27 of 31) intron (NM_001329944, intron 27 of 31) 61697 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr12-3122 chr12 31508008 31508218 + 10.6 0.000 intron (NM_001308339, intron 1 of 22) intron (NM_001308339, intron 1 of 22) -81810 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr2-4532 chr2 39399506 39399716 + 10.6 0.000 intron (NM_003618, intron 1 of 33) intron (NM_003618, intron 1 of 33) 37674 NM_001270425 8491 Hs.655750 NM_003618 ENSG00000011566 MAP4K3 GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding chr11-5918 chr11 14212912 14213122 + 10.6 0.000 intron (NM_006108, intron 6 of 15) intron (NM_006108, intron 6 of 15) 145468 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr18-611 chr18 929552 929762 + 10.6 0.000 Intergenic Intergenic -1664 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA chr16-4613 chr16 69491218 69491428 + 10.6 0.000 Intergenic AluSx|SINE|Alu 66728 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr11-5492 chr11 79763645 79763855 + 10.6 0.000 Intergenic L2b|LINE|L2 -322720 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr12-4022 chr12 41344903 41345113 + 10.6 0.000 intron (NM_001164595, intron 3 of 9) intron (NM_001164595, intron 3 of 9) -92731 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr3-6385 chr3 90091673 90091883 + 10.6 0.000 Intergenic Intergenic 984157 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr3-8117 chr3 20622201 20622411 + 10.6 0.000 Intergenic L1MA3|LINE|L1 279838 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr11-4972 chr11 69093829 69094039 + 10.6 0.000 Intergenic L2|LINE|L2 10758 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr8-2676 chr8 88706050 88706260 + 10.6 0.000 Intergenic Intergenic -378672 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr3-3957 chr3 51868827 51869037 + 10.6 0.000 Intergenic LTR47A|LTR|ERVL -4664 NR_109984 101928999 NR_109984 ENSG00000235455 IQCF5-AS1 - IQCF5 antisense RNA 1 ncRNA chr3-7977 chr3 176490993 176491203 + 10.6 0.000 Intergenic MER5A1|DNA|hAT-Charlie -24005 NR_107017 102465858 NR_107017 ENSG00000283333 MIR7977 hsa-mir-7977 microRNA 7977 ncRNA chr5-4493 chr5 10202625 10202835 + 10.6 0.000 Intergenic Intergenic 47158 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr5-4087 chr5 65200153 65200363 + 10.6 0.000 intron (NR_135689, intron 21 of 25) intron (NR_135689, intron 21 of 25) 281662 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr1-14477 chr1 48036689 48036899 + 10.6 0.000 Intergenic L2c|LINE|L2 -39409 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr5-5029 chr5 85344195 85344405 + 10.6 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -938144 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr1-15015 chr1 92808476 92808686 + 10.6 0.000 Intergenic Intergenic -16171 NM_005665 7813 Hs.594434 NM_005665 ENSG00000067208 EVI5 EVI-5|NB4S ecotropic viral integration site 5 protein-coding chr18-3021 chr18 26307300 26307510 + 10.6 0.000 intron (NR_121653, intron 10 of 15) intron (NR_121653, intron 10 of 15) 80960 NM_001293725 6875 Hs.369519 NM_005640 ENSG00000141384 TAF4B SPGF13|TAF2C2|TAFII105 TATA-box binding protein associated factor 4b protein-coding chr12-4335 chr12 740593 740803 + 10.6 0.000 Intergenic Intergenic -11881 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr4-2627 chr4 149434877 149435087 + 10.6 0.000 intron (NM_001363507, intron 12 of 13) LTR41|LTR|ERVL 280687 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr6-4042 chr6 131204868 131205078 + 10.6 0.000 intron (NM_016377, intron 6 of 7) intron (NM_016377, intron 6 of 7) -45431 NM_004842 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr15-4911 chr15 77553118 77553328 + 10.6 0.000 Intergenic Intergenic 27628 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr21-1105 chr21 34835250 34835460 + 10.6 0.000 intron (NM_001001890, intron 3 of 5) intron (NM_001001890, intron 3 of 5) 53344 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr10-7602 chr10 20246075 20246285 + 10.6 0.000 intron (NM_032812, intron 13 of 13) intron (NM_032812, intron 13 of 13) -305790 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr3-7053 chr3 174149170 174149380 + 10.6 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -228479 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr3-3640 chr3 120767136 120767346 + 10.6 0.000 intron (NM_005513, intron 2 of 4) LTR40a|LTR|ERVL 24497 NM_005513 2960 Hs.445272 NM_005513 ENSG00000153767 GTF2E1 FE|TF2E1|TFIIE-A general transcription factor IIE subunit 1 protein-coding chr1-9674 chr1 49485939 49486149 + 10.6 0.000 intron (NR_136623, intron 2 of 12) intron (NR_136623, intron 2 of 12) -13959 NR_046839 100874313 Hs.551277 NR_046839 ENSG00000225623 AGBL4-IT1 - AGBL4 intronic transcript 1 ncRNA chr13-1416 chr13 33447077 33447287 + 10.6 0.000 intron (NM_001243476, intron 4 of 17) intron (NM_001243476, intron 4 of 17) -111916 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr19-1958 chr19 47067427 47067637 + 10.6 0.000 exon (NM_015168, exon 15 of 15) exon (NM_015168, exon 15 of 15) -18908 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chr13-2414 chr13 44412989 44413199 + 10.6 0.000 Intergenic Intergenic -7110 NR_104174 400128 Hs.438480 NR_104174 ENSG00000237361 TUSC8 LINC01071|XLOC_010588 tumor suppressor candidate 8 ncRNA chr3-3861 chr3 37482662 37482872 + 10.6 0.000 intron (NM_002207, intron 4 of 27) intron (NM_002207, intron 4 of 27) 30626 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chrX-2244 chrX 46546560 46546770 + 10.6 0.000 non-coding (NR_015378, exon 2 of 2) non-coding (NR_015378, exon 2 of 2) 1175 NR_015378 401588 Hs.729370 NR_015378 ENSG00000230844 ZNF674-AS1 - ZNF674 antisense RNA 1 (head to head) ncRNA chrX-2374 chrX 68808140 68808350 + 10.6 0.000 Intergenic MIRb|SINE|MIR -20752 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr11-3130 chr11 44714745 44714955 + 10.6 0.000 Intergenic Intergenic -12112 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr19-3380 chr19 12875968 12876178 + 10.6 0.000 exon (NM_001375, exon 6 of 6) exon (NM_001375, exon 6 of 6) 5376 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr8-4357 chr8 101280268 101280478 + 10.6 0.000 Intergenic Intergenic -74309 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr13-3286 chr13 45605598 45605808 + 10.6 0.000 intron (NM_182542, intron 2 of 14) intron (NM_182542, intron 2 of 14) 10036 NM_182542 220081 Hs.668747 NM_182542 ENSG00000165837 ERICH6B FAM194B glutamate rich 6B protein-coding chr18-3370 chr18 58670168 58670378 + 10.6 0.000 3' UTR (NM_001289967, exon 2 of 2) 3' UTR (NM_001289967, exon 2 of 2) -1192 NM_006785 10892 Hs.601217 NM_006785 ENSG00000172175 MALT1 IMD12|MLT|MLT1|PCASP1 MALT1 paracaspase protein-coding chr20-1332 chr20 63775049 63775259 + 10.6 0.000 intron (NM_001369741, intron 3 of 4) CpG 30349 NM_025224 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr3-5883 chr3 37723968 37724178 + 10.6 0.000 intron (NM_002207, intron 18 of 27) MamRep605|LTR?|LTR? 137707 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr12-5240 chr12 108768707 108768917 + 10.6 0.000 Intergenic CpG -37262 NM_014325 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr1-10266 chr1 120535174 120535384 + 10.6 0.000 intron (NR_144517, intron 19 of 41) intron (NR_144517, intron 19 of 41) -101170 NR_003242 767846 Hs.657186 NR_003242 ENSG00000270392 PFN1P2 C1orf152|COAS3 profilin 1 pseudogene 2 pseudo chr4-4743 chr4 94603447 94603657 + 10.6 0.000 intron (NM_006457, intron 7 of 12) LTR57|LTR|ERVL 151610 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr2-3712 chr2 224420780 224420990 + 10.6 0.000 Intergenic L2a|LINE|L2 -18778 NM_001122779 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr13-1570 chr13 34680951 34681161 + 10.6 0.000 Intergenic Intergenic -40371 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr8-2658 chr8 79427999 79428209 + 10.6 0.000 Intergenic Intergenic 95916 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA chr2-8812 chr2 169169693 169169903 + 10.6 0.000 exon (NM_004525, exon 60 of 79) exon (NM_004525, exon 60 of 79) 88691 NM_001142271 10170 Hs.179608 NM_005771 ENSG00000073737 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase 9 protein-coding chr6-1378 chr6 88360006 88360216 + 10.6 0.000 Intergenic Intergenic 179258 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr7-3628 chr7 40763457 40763667 + 10.6 0.000 intron (NM_024728, intron 14 of 14) intron (NM_024728, intron 14 of 14) 216377 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr10-2256 chr10 110794114 110794324 + 10.6 0.000 intron (NM_001134363, intron 5 of 13) intron (NM_001134363, intron 5 of 13) 76685 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr10-3284 chr10 133462997 133463207 + 10.6 0.000 intron (NR_149718, intron 7 of 12) intron (NR_149718, intron 7 of 12) 9174 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr5-4428 chr5 1530211 1530421 + 10.6 0.000 Intergenic L1MEc|LINE|L1 -6356 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr6-6995 chr6 20429183 20429393 + 10.6 0.000 intron (NM_001243076, intron 1 of 6) Tigger7|DNA|TcMar-Tigger 25609 NM_001243076 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chrX-953 chrX 78764387 78764597 + 10.6 0.000 Intergenic Intergenic 16772 NM_005296 2846 Hs.522701 NM_005296 ENSG00000147145 LPAR4 GPR23|LPA4|P2RY9|P2Y5-LIKE|P2Y9 lysophosphatidic acid receptor 4 protein-coding chr11-2980 chr11 93523995 93524205 + 10.6 0.000 intron (NM_020179, intron 1 of 2) intron (NM_020179, intron 1 of 2) 19291 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr4-3753 chr4 84279874 84280084 + 10.6 0.000 intron (NR_125909, intron 4 of 8) intron (NR_125909, intron 4 of 8) 19190 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr4-3528 chr4 159175454 159175664 + 10.6 0.000 intron (NM_001351724, intron 1 of 30) intron (NM_001351724, intron 1 of 30) -46665 NR_037459 100500881 NR_037459 ENSG00000264105 MIR3688-1 MIR3688|mir-3688-1 microRNA 3688-1 ncRNA chr4-7764 chr4 94458474 94458684 + 10.6 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 6637 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr17-5350 chr17 29424544 29424754 + 10.6 0.000 intron (NM_025142, intron 1 of 17) intron (NM_025142, intron 1 of 17) 33724 NM_020791 57551 Hs.597434 NM_020791 ENSG00000160551 TAOK1 KFC-B|MAP3K16|MARKK|PSK-2|PSK2|TAO1|hKFC-B|hTAOK1 TAO kinase 1 protein-coding chr22-1194 chr22 17052501 17052711 + 10.6 0.000 intron (NR_152826, intron 3 of 3) AluSq2|SINE|Alu 16036 NR_152825 100130418 Hs.660640 NR_015352 CECR7 CYCL|SAHL1 cat eye syndrome chromosome region, candidate 7 ncRNA chr12-2131 chr12 91974606 91974816 + 10.6 0.000 Intergenic Intergenic 167002 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr18-1672 chr18 68417517 68417727 + 10.6 0.000 Intergenic Intergenic 297486 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr3-3871 chr3 38519180 38519390 + 10.6 0.000 intron (NR_134938, intron 6 of 7) intron (NR_134938, intron 6 of 7) 22945 NR_134938 9941 Hs.517897 NM_005107 ENSG00000157036 EXOG ENDOGL1|ENDOGL2|ENGL|ENGL-a|ENGL-b|ENGLA|ENGLB exo/endonuclease G protein-coding chr14-3061 chr14 61365501 61365711 + 10.6 0.000 intron (NM_006255, intron 1 of 13) intron (NM_006255, intron 1 of 13) 44163 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr1-14363 chr1 42391100 42391310 + 10.6 0.000 intron (NM_173642, intron 1 of 4) L2a|LINE|L2 10413 NM_173642 284716 Hs.420244 NM_173642 ENSG00000177181 RIMKLA FAM80A|NAAGS|NAAGS-II ribosomal modification protein rimK like family member A protein-coding chr9-3413 chr9 133847086 133847296 + 10.6 0.000 intron (NM_001134398, intron 3 of 29) intron (NM_001134398, intron 3 of 29) -107236 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr2-6844 chr2 70376927 70377137 + 10.6 0.000 Intergenic Intergenic -74965 NM_001329753 84908 Hs.516077 NM_032822 ENSG00000035141 FAM136A - family with sequence similarity 136 member A protein-coding chr16-3522 chr16 28164102 28164312 + 10.6 0.000 intron (NM_001270940, intron 7 of 24) intron (NM_001270940, intron 7 of 24) 47758 NM_001270940 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr1-4869 chr1 31880087 31880297 + 10.6 0.000 Intergenic MIRb|SINE|MIR 57626 NM_001369858 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr10-4778 chr10 5304597 5304807 + 10.6 0.000 Intergenic Intergenic -33466 NR_149060 110806285 NR_149060 ENSG00000224034 LINC02561 - long intergenic non-protein coding RNA 2561 ncRNA chr1-6837 chr1 98573898 98574108 + 10.6 0.000 Intergenic L1ME3E|LINE|L1 -87718 NR_033716 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr1-8065 chr1 1580132 1580342 + 10.6 0.000 Intergenic AluSx1|SINE|Alu -5374 NM_014188 29101 Hs.30026 NM_014188 ENSG00000160075 SSU72 HSPC182|PNAS-120 SSU72 homolog, RNA polymerase II CTD phosphatase protein-coding chr2-8813 chr2 169233978 169234188 + 10.6 0.000 intron (NM_004525, intron 29 of 78) intron (NM_004525, intron 29 of 78) 128451 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr18-1239 chr18 49178059 49178269 + 10.6 0.000 intron (NM_001353210, intron 13 of 16) intron (NM_001353210, intron 13 of 16) -128396 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr19-4356 chr19 2112604 2112814 + 10.6 0.000 intron (NM_003938, intron 22 of 29) intron (NM_003938, intron 22 of 29) 15794 NM_001031735 113177 Hs.424049 NM_052878 ENSG00000099840 IZUMO4 C19orf36|IMAGE:4215339 IZUMO family member 4 protein-coding chr3-4566 chr3 162970211 162970421 + 10.6 0.000 Intergenic Intergenic 332985 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr22-2340 chr22 41995855 41996065 + 10.6 0.000 3' UTR (NM_019106, exon 10 of 10) 3' UTR (NM_019106, exon 10 of 10) -2828 NM_152613 164684 Hs.655541 NM_152613 ENSG00000183066 WBP2NL GRAMD7|PAWP WBP2 N-terminal like protein-coding chr11-7859 chr11 118426447 118426657 + 10.6 0.000 Intergenic (ATAT)n|Simple_repeat|Simple_repeat -7737 NR_046369 100131626 Hs.721614 NR_046369 LOC100131626 - uncharacterized LOC100131626 ncRNA chr7-4935 chr7 134918752 134918962 + 10.6 0.000 intron (NM_033139, intron 1 of 12) AluJo|SINE|Alu 27399 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr16-1335 chr16 56847721 56847931 + 10.6 0.000 3' UTR (NM_001242795, exon 20 of 20) 3' UTR (NM_001242795, exon 20 of 20) -10692 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr4-4667 chr4 84603214 84603424 + 10.6 0.000 intron (NM_001263, intron 1 of 12) intron (NM_001263, intron 1 of 12) 20192 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr3-6049 chr3 50282967 50283177 + 10.6 0.000 intron (NM_153215, intron 1 of 3) AluSc|SINE|Alu 3985 NM_001304385 132228 Hs.315177 NM_153215 ENSG00000179564 LSMEM2 C3orf45 leucine rich single-pass membrane protein 2 protein-coding chr4-5331 chr4 182705242 182705452 + 10.6 0.000 intron (NM_001080477, intron 12 of 27) intron (NM_001080477, intron 12 of 27) 211906 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr20-2292 chr20 4947881 4948091 + 10.6 0.000 intron (NM_005116, intron 2 of 16) intron (NM_005116, intron 2 of 16) 53524 NM_005116 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr4-4280 chr4 24735075 24735285 + 10.6 0.000 Intergenic LTR53|LTR|ERVL -60393 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr2-4224 chr2 217429360 217429570 + 10.6 0.000 intron (NR_026597, intron 5 of 12) intron (NR_026597, intron 5 of 12) 146732 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr9-5644 chr9 121359429 121359639 + 10.6 0.000 intron (NM_198194, intron 1 of 2) intron (NM_198194, intron 1 of 2) 10716 NR_073037 2040 Hs.253903 NM_004099 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding chr1-6243 chr1 226979995 226980205 + 10.6 0.000 intron (NM_020247, intron 5 of 14) intron (NM_020247, intron 5 of 14) 39806 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr14-2294 chr14 64549856 64550066 + 10.6 0.000 promoter-TSS (NM_172365) promoter-TSS (NM_172365) 0 NM_172365 145376 Hs.144696 NM_172365 ENSG00000165807 PPP1R36 C14orf50 protein phosphatase 1 regulatory subunit 36 protein-coding chr11-4052 chr11 13928894 13929104 + 10.6 0.000 Intergenic MIR|SINE|MIR -4136 NR_135052 101928132 Hs.568970 NR_135052 ENSG00000254438 LINC02683 - long intergenic non-protein coding RNA 2683 ncRNA chr15-1202 chr15 42349224 42349434 + 10.6 0.000 intron (NM_198141, intron 21 of 23) intron (NM_198141, intron 21 of 23) -10171 NM_024344 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr4-8486 chr4 159509233 159509443 + 10.6 0.000 Intergenic LTR16|LTR|ERVL 241529 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr10-2359 chr10 91883687 91883897 + 10.6 0.000 Intergenic Intergenic 25694 NM_152429 143282 Hs.466120 NM_152429 ENSG00000174721 FGFBP3 C10orf13|FGF-BP3 fibroblast growth factor binding protein 3 protein-coding chr1-4067 chr1 211735750 211735960 + 10.6 0.000 Intergenic MIRc|SINE|MIR 60093 NR_148994 91548 Hs.367839 NR_148994 LOC91548 - uncharacterized LOC91548 ncRNA chr17-5531 chr17 43528493 43528703 + 10.6 0.000 exon (NM_001369366, exon 13 of 13) exon (NM_001369366, exon 13 of 13) 1837 NM_001261439 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr6-3280 chr6 155729931 155730141 + 10.6 0.000 Intergenic MIRb|SINE|MIR 215192 NR_134597 105378068 Hs.131541 NR_134596 LOC105378068 - uncharacterized LOC105378068 ncRNA chr9-4608 chr9 106106963 106107173 + 10.6 0.000 Intergenic AluSx3|SINE|Alu 412527 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr15-1111 chr15 85354476 85354686 + 10.6 0.000 Intergenic Intergenic -26015 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chrX-735 chrX 3655463 3655673 + 10.6 0.000 intron (NM_005044, intron 2 of 8) intron (NM_005044, intron 2 of 8) -3919 NR_046643 100873944 NR_046643 ENSG00000236188 PRKX-AS1 - PRKX antisense RNA 1 ncRNA chr3-6073 chr3 51841494 51841704 + 10.6 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 14716 NM_001207023 401067 Hs.729443 NM_001085479 ENSG00000229972 IQCF3 - IQ motif containing F3 protein-coding chr14-1454 chr14 101647151 101647361 + 10.6 0.000 Intergenic L1MB3|LINE|L1 -83181 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr4-6298 chr4 84309387 84309597 + 10.6 0.000 Intergenic Intergenic -10323 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr12-2408 chr12 47238652 47238862 + 10.6 0.000 Intergenic L2b|LINE|L2 -22314 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA chr7-5856 chr7 89986423 89986633 + 10.6 0.000 intron (NR_110029, intron 2 of 2) L1MA6|LINE|L1 -132872 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr16-3834 chr16 58807683 58807893 + 10.6 0.000 Intergenic Intergenic -73472 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr22-1452 chr22 47011647 47011857 + 10.6 0.000 intron (NM_001284305, intron 10 of 12) intron (NM_001284305, intron 10 of 12) -95710 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr1-9660 chr1 48078244 48078454 + 10.6 0.000 Intergenic MIRb|SINE|MIR -80964 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr1-11376 chr1 42925373 42925583 + 10.6 0.000 3' UTR (NM_006516, exon 10 of 10) 3' UTR (NM_006516, exon 10 of 10) 33390 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr1-6682 chr1 52032400 52032610 + 10.6 0.000 non-coding (NR_046405, exon 3 of 3) non-coding (NR_046405, exon 3 of 3) 1305 NM_138417 112970 Hs.476033 NM_138417 ENSG00000198841 KTI12 SBBI81|TOT4 KTI12 chromatin associated homolog protein-coding chr11-2768 chr11 66188707 66188917 + 10.6 0.000 intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) -68482 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr8-4657 chr8 135756914 135757124 + 10.6 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 299563 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr1-5082 chr1 109603838 109604048 + 10.6 0.000 intron (NM_005272, intron 7 of 7) intron (NM_005272, intron 7 of 7) 5050 NR_029583 406974 NR_029583 ENSG00000284443 MIR197 MIRN197|miR-197|miRNA197 microRNA 197 ncRNA chr11-3076 chr11 14218433 14218643 + 10.6 0.000 intron (NM_006108, intron 6 of 15) L2c|LINE|L2 139947 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr4-4694 chr4 86921773 86921983 + 10.6 0.000 Intergenic L1MB3|LINE|L1 12972 NR_038841 100506746 Hs.657766 NR_038841 AFF1-AS1 - AFF1 antisense RNA 1 ncRNA chr8-7109 chr8 119005963 119006173 + 10.6 0.000 intron (NM_001324095, intron 1 of 7) intron (NM_001324095, intron 1 of 7) 53805 NM_001324095 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding chr17-4365 chr17 17326583 17326793 + 10.6 0.000 intron (NM_020201, intron 3 of 4) intron (NM_020201, intron 3 of 4) 23315 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr4-4500 chr4 60342174 60342384 + 10.6 0.000 Intergenic AluJb|SINE|Alu -580340 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr5-5729 chr5 169108624 169108834 + 10.6 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 95502 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr14-1353 chr14 101232863 101233073 + 10.6 0.000 Intergenic Intergenic 112112 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr18-1112 chr18 75070704 75070914 + 10.6 0.000 Intergenic Intergenic 134704 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr6-2206 chr6 40738292 40738502 + 10.6 0.000 Intergenic Intergenic -151033 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr11-2743 chr11 33883340 33883550 + 10.6 0.000 intron (NM_005574, intron 1 of 5) intron (NM_005574, intron 1 of 5) 8631 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr11-5408 chr11 67742161 67742371 + 10.6 0.000 Intergenic Intergenic -61042 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr19-4516 chr19 7733013 7733223 + 10.6 0.000 promoter-TSS (NM_198492) promoter-TSS (NM_198492) -947 NM_198492 339390 Hs.220649 NM_198492 ENSG00000182566 CLEC4G DTTR431|LP2698|LSECtin|UNQ431 C-type lectin domain family 4 member G protein-coding chr2-6101 chr2 197571443 197571653 + 10.6 0.000 3' UTR (NM_144629, exon 9 of 9) 3' UTR (NM_144629, exon 9 of 9) 55250 NM_001204094 25843 Hs.633165 NM_015387 ENSG00000115540 MOB4 2C4D|CGI-95|MOB1|MOB3|MOBKL3|PHOCN|PREI3 MOB family member 4, phocein protein-coding chr11-3838 chr11 69001810 69002020 + 10.6 0.000 Intergenic Intergenic -10439 NR_120541 101928200 Hs.703759 NR_120541 ENSG00000256508 MRGPRF-AS1 - MRGPRF antisense RNA 1 ncRNA chr17-2321 chr17 48593963 48594173 + 10.6 0.000 promoter-TSS (NM_002147) promoter-TSS (NM_002147) -327 NM_002147 3215 Hs.654456 NM_002147 ENSG00000120075 HOXB5 HHO.C10|HOX2|HOX2A|HU-1|Hox2.1 homeobox B5 protein-coding chr6-5685 chr6 110528518 110528728 + 10.6 0.000 Intergenic Intergenic -52010 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr3-5894 chr3 38608405 38608615 + 10.6 0.000 intron (NM_198056, intron 7 of 27) intron (NM_198056, intron 7 of 27) 41162 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr11-959 chr11 67443618 67443828 + 10.6 0.000 promoter-TSS (NM_020441) promoter-TSS (NM_020441) 98 NM_001018070 57175 Hs.6191 NM_020441 ENSG00000172725 CORO1B CORONIN-2 coronin 1B protein-coding chr7-7562 chr7 119040651 119040861 + 10.6 0.000 Intergenic MSTC-int|LTR|ERVL-MaLR 816052 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr3-5615 chr3 9640933 9641143 + 10.6 0.000 Intergenic HUERS-P1-int|LTR|ERV1 -8467 NM_022485 64419 Hs.475382 NM_022485 ENSG00000163719 MTMR14 C3orf29 myotubularin related protein 14 protein-coding chr5-7681 chr5 55280317 55280527 + 10.6 0.000 intron (NR_144323, intron 12 of 26) intron (NR_144323, intron 12 of 26) 27272 NR_144324 54505 Hs.593268 NM_019030 ENSG00000067248 DHX29 DDX29 DExH-box helicase 29 protein-coding chr3-5780 chr3 24826255 24826465 + 10.6 0.000 Intergenic LTR78B|LTR|ERV1 -2963 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chrX-2820 chrX 135748077 135748287 + 10.6 0.000 Intergenic LTR13|LTR|ERVK 19811 NM_001017435 441519 Hs.535080 NM_001017435 ENSG00000269096 CT45A3 CT45-3|CT45-4|CT45.3|CT45.4|CT45A4 cancer/testis antigen family 45 member A3 protein-coding chr14-3457 chr14 100830545 100830755 + 10.6 0.000 intron (NR_046471, intron 3 of 5) L2c|LINE|L2 4518 NR_003531 55384 Hs.654863 NR_002766 ENSG00000214548 MEG3 FP504|GTL2|LINC00023|NCRNA00023|PRO0518|PRO2160|onco-lncRNA-83|prebp1 maternally expressed 3 ncRNA chr5-1917 chr5 173474927 173475137 + 10.6 0.000 Intergenic MIR|SINE|MIR -104602 NR_027109 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr7-3539 chr7 11254320 11254530 + 10.6 0.000 Intergenic Intergenic 280553 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr11-3331 chr11 114777667 114777877 + 10.6 0.000 Intergenic MIR|SINE|MIR 99245 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr17-2470 chr17 49851465 49851675 + 10.6 0.000 Intergenic CpG -3553 NM_001077506 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr20-2485 chr20 32933094 32933304 + 10.6 0.000 intron (NM_001143967, intron 22 of 26) MIRb|SINE|MIR 71234 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr11-5843 chr11 8933445 8933655 + 10.6 0.000 promoter-TSS (NM_020643) promoter-TSS (NM_020643) -603 NM_020643 56673 Hs.277349 NM_020643 ENSG00000176029 C11orf16 - chromosome 11 open reading frame 16 protein-coding chr4-2477 chr4 5824835 5825045 + 10.6 0.000 intron (NM_001014809, intron 13 of 13) intron (NM_001014809, intron 13 of 13) 62873 NM_001288662 1400 Hs.135270 NM_001313 ENSG00000072832 CRMP1 CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 collapsin response mediator protein 1 protein-coding chr2-8461 chr2 122327808 122328018 + 10.6 0.000 Intergenic MIR|SINE|MIR 572262 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr5-3007 chr5 6545312 6545522 + 10.6 0.000 Intergenic Intergenic -36719 NR_024423 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 SRHC long intergenic non-protein coding RNA 1018 ncRNA chr18-2560 chr18 6175240 6175450 + 10.6 0.000 intron (NM_001365769, intron 12 of 16) L1ME2|LINE|L1 -81399 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA chr1-5095 chr1 115495735 115495945 + 10.6 0.000 Intergenic L2b|LINE|L2 -146130 NM_001172411 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr7-6006 chr7 104646031 104646241 + 10.6 0.000 intron (NM_199000, intron 1 of 2) MIRb|SINE|MIR 157956 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr9-3434 chr9 136453003 136453213 + 10.6 0.000 intron (NM_014866, intron 22 of 31) intron (NM_014866, intron 22 of 31) -13263 NM_019892 56623 Hs.120998 NM_019892 ENSG00000148384 INPP5E CORS1|CPD4|JBTS1|MORMS|PPI5PIV|pharbin inositol polyphosphate-5-phosphatase E protein-coding chr7-971 chr7 5608987 5609197 + 10.6 0.000 Intergenic FRAM|SINE|Alu 16276 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr8-1124 chr8 116089476 116089686 + 10.6 0.000 intron (NR_046215, intron 7 of 13) intron (NR_046215, intron 7 of 13) 235478 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr10-1538 chr10 80204952 80205162 + 10.6 0.000 promoter-TSS (NM_001278408) promoter-TSS (NM_001278408) 480 NM_145869 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr17-6113 chr17 81108515 81108725 + 10.6 0.000 intron (NM_001144888, intron 13 of 13) intron (NM_001144888, intron 13 of 13) 16753 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr1-6784 chr1 84299923 84300133 + 10.6 0.000 intron (NM_001010971, intron 1 of 3) intron (NM_001010971, intron 1 of 3) 1490 NM_001010971 148418 Hs.591445 NM_001010971 ENSG00000203943 SAMD13 HSD-41|HSD-42 sterile alpha motif domain containing 13 protein-coding chr17-2678 chr17 40068792 40069002 + 10.6 0.000 intron (NM_199334, intron 1 of 8) intron (NM_199334, intron 1 of 8) 5932 NM_199334 7067 Hs.724 NM_003250 ENSG00000126351 THRA AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1 thyroid hormone receptor alpha protein-coding chr17-7591 chr17 21337570 21337780 + 10.6 0.000 Intergenic Intergenic -38682 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr6-2125 chr6 2846680 2846890 + 10.6 0.000 Intergenic L2b|LINE|L2 -4922 NR_073112 1992 Hs.381167 NM_030666 ENSG00000021355 SERPINB1 EI|ELANH2|HEL-S-27|HEL57|LEI|M/NEI|MNEI|PI-2|PI2 serpin family B member 1 protein-coding chr2-5100 chr2 16875603 16875813 + 10.6 0.000 Intergenic LTR78|LTR|ERV1 -209874 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr3-3852 chr3 35965974 35966184 + 10.6 0.000 Intergenic Intergenic 221603 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr1-7674 chr1 18098944 18099154 + 10.6 0.000 Intergenic Intergenic -8749 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr6-5510 chr6 165644704 165644914 + 10.6 0.000 intron (NM_006661, intron 1 of 22) intron (NM_006661, intron 1 of 22) 17291 NM_001130690 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr1-7105 chr1 200878523 200878733 + 10.6 0.000 Intergenic Intergenic 5647 NM_005298 2848 Hs.534316 NM_005298 ENSG00000170128 GPR25 - G protein-coupled receptor 25 protein-coding chr12-1110 chr12 6965239 6965449 + 10.6 0.000 TTS (NM_001267700) TTS (NM_001267700) 1247 NR_029682 406933 NR_029682 ENSG00000207708 MIR141 MIRN141|mir-141 microRNA 141 ncRNA chr7-3186 chr7 105096639 105096849 + 10.6 0.000 intron (NM_182931, intron 15 of 26) intron (NM_182931, intron 15 of 26) 82539 NM_182931 55904 Hs.592262 NM_018682 ENSG00000005483 KMT2E HDCMC04P|MLL5|NKp44L lysine methyltransferase 2E protein-coding chr8-3223 chr8 135443171 135443381 + 10.6 0.000 Intergenic Intergenic -14180 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr18-1033 chr18 421099 421309 + 10.6 0.000 intron (NM_130386, intron 2 of 9) intron (NM_130386, intron 2 of 9) 79497 NM_130386 81035 Hs.464422 NM_030781 ENSG00000158270 COLEC12 CLP1|NSR2|SCARA4|SRCL collectin subfamily member 12 protein-coding chr12-4165 chr12 86561824 86562034 + 10.6 0.000 intron (NM_001351285, intron 2 of 8) HERVL-int|LTR|ERVL 183220 NR_162123 113839519 NR_162123 MIR3059 - microRNA 3059 ncRNA chr15-2473 chr15 88703389 88703599 + 10.6 0.000 Intergenic L1ME5|LINE|L1 64478 NM_001303236 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr4-3938 chr4 166435629 166435839 + 10.6 0.000 Intergenic ERVL-B4-int|LTR|ERVL 562497 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr4-3059 chr4 141078943 141079153 + 10.6 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 54421 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr3-3359 chr3 36815529 36815739 + 10.6 0.000 Intergenic Intergenic 6866 NR_147141 105377031 Hs.333862 NR_147141 ENSG00000279727 LINC02033 - long intergenic non-protein coding RNA 2033 ncRNA chr1-9976 chr1 81336442 81336652 + 10.6 0.000 intron (NM_001366003, intron 2 of 27) intron (NM_001366003, intron 2 of 27) 30152 NM_001366008 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr1-4903 chr1 38300465 38300675 + 10.6 0.000 Intergenic L1ME4a|LINE|L1 -85803 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA chr1-3563 chr1 981655 981865 + 10.6 0.000 promoter-TSS (NM_001369898) promoter-TSS (NM_001369898) 333 NM_001369897 84808 Hs.271462 NM_032722 ENSG00000187642 PERM1 C1orf170 PPARGC1 and ESRR induced regulator, muscle 1 protein-coding chr2-4498 chr2 15334772 15334982 + 10.6 0.000 intron (NR_052013, intron 35 of 50) L1ME3A|LINE|L1 226457 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr15-3508 chr15 99341955 99342165 + 10.6 0.000 intron (NR_135755, intron 5 of 8) intron (NR_135755, intron 5 of 8) 84535 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr2-9189 chr2 216158244 216158454 + 10.6 0.000 intron (NM_021141, intron 14 of 20) intron (NM_021141, intron 14 of 20) 49001 NM_021141 7520 Hs.388739 NM_021141 ENSG00000079246 XRCC5 KARP-1|KARP1|KU80|KUB2|Ku86|NFIV X-ray repair cross complementing 5 protein-coding chr11-3536 chr11 13208349 13208559 + 10.6 0.000 Intergenic Intergenic -68198 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr3-2444 chr3 48012653 48012863 + 10.6 0.000 intron (NM_002375, intron 1 of 18) intron (NM_002375, intron 1 of 18) 76090 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chrX-5443 chrX 154060292 154060502 + 10.6 0.000 intron (NM_001316337, intron 2 of 4) intron (NM_001316337, intron 2 of 4) 36572 NM_001369394 4204 Hs.200716 NM_004992 ENSG00000169057 MECP2 AUTSX3|MRX16|MRX79|MRXS13|MRXSL|PPMX|RS|RTS|RTT methyl-CpG binding protein 2 protein-coding chr3-7019 chr3 171570029 171570239 + 10.6 0.000 Intergenic Intergenic -109726 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr10-8850 chr10 110962596 110962806 + 10.6 0.000 intron (NM_001324337, intron 2 of 9) intron (NM_001324337, intron 2 of 9) -25446 NR_026715 644511 Hs.632083 NR_026715 ENSG00000234118 RPL13AP6 RPL13A_7_1096|bA348N5.5 ribosomal protein L13a pseudogene 6 pseudo chr15-2429 chr15 72877571 72877781 + 10.6 0.000 Intergenic L1ME1|LINE|L1 -93918 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr12-5199 chr12 105382815 105383025 + 10.6 0.000 Intergenic Intergenic 52229 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr4-1824 chr4 85812647 85812857 + 10.6 0.000 intron (NM_001346093, intron 1 of 6) intron (NM_001346093, intron 1 of 6) -15185 NM_001287805 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr10-3081 chr10 9642871 9643081 + 10.6 0.000 Intergenic L1MCc|LINE|L1 -347383 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 - uncharacterized LOC101928272 ncRNA chr6-8273 chr6 140462949 140463159 + 10.6 0.000 Intergenic Intergenic -220760 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chrX-2039 chrX 17226764 17226974 + 10.6 0.000 Intergenic LTR33B|LTR|ERVL -148331 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr3-1726 chr3 113231884 113232094 + 10.6 0.000 intron (NM_001301861, intron 2 of 19) intron (NM_001301861, intron 2 of 19) 19873 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr13-2558 chr13 66077809 66078019 + 10.6 0.000 Intergenic ERVL-B4-int|LTR|ERVL -111485 NR_039692 100616302 NR_039692 ENSG00000263581 MIR548X2 - microRNA 548x-2 ncRNA chr1-5926 chr1 19505244 19505454 + 10.6 0.000 Intergenic Intergenic -19810 NM_001206540 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr2-8943 chr2 186919377 186919587 + 10.6 0.000 Intergenic ERVL-E-int|LTR|ERVL -70312 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr11-7003 chr11 117278523 117278733 + 10.6 0.000 intron (NM_001077239, intron 6 of 14) intron (NM_001077239, intron 6 of 14) -12718 NR_037803 100379571 Hs.736305 NR_037803 BACE1-AS BACE1-AS1|BACE1AS|NCRNA00177 BACE1 antisense RNA ncRNA chr4-1943 chr4 108059901 108060111 + 10.6 0.000 intron (NM_001130714, intron 9 of 9) intron (NM_001130714, intron 9 of 9) 55342 NM_001331027 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding chr4-5933 chr4 151992757 151992967 + 10.6 0.000 Intergenic Intergenic -107891 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr2-6964 chr2 122449877 122450087 + 10.6 0.000 Intergenic L1M2a1|LINE|L1 623499 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr3-8241 chr3 49561100 49561310 + 10.6 0.000 intron (NM_003458, intron 1 of 11) intron (NM_003458, intron 1 of 11) 6728 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr18-1955 chr18 37247094 37247304 + 10.6 0.000 non-coding (NR_148522, exon 13 of 14) non-coding (NR_148522, exon 13 of 14) -27261 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr3-1912 chr3 170470642 170470852 + 10.6 0.000 intron (NR_135557, intron 1 of 2) GA-rich|Low_complexity|Low_complexity 3462 NR_135555 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr11-3219 chr11 68047960 68048170 + 10.6 0.000 intron (NM_001351059, intron 12 of 18) L2b|LINE|L2 3271 NR_106811 102465451 NR_106811 ENSG00000275022 MIR6753 hsa-mir-6753 microRNA 6753 ncRNA chr1-4681 chr1 222616561 222616771 + 10.6 0.000 Intergenic Intergenic -1431 NM_198551 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 MIA SH3 domain ER export factor 3 protein-coding chr17-2904 chr17 42222272 42222482 + 10.6 0.000 intron (NM_012448, intron 5 of 18) intron (NM_012448, intron 5 of 18) -27883 NM_032484 84514 Hs.38039 NM_032484 ENSG00000167925 GHDC D11LGP1|LGP1 GH3 domain containing protein-coding chr7-3097 chr7 9488619 9488829 + 10.6 0.000 Intergenic L1PA15|LINE|L1 -145546 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr9-7079 chr9 127199893 127200103 + 10.6 0.000 intron (NM_014636, intron 14 of 18) intron (NM_014636, intron 14 of 18) -63664 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr11-3347 chr11 119791010 119791220 + 10.6 0.000 Intergenic Intergenic 61532 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr1-1754 chr1 224929749 224929959 + 10.6 0.000 intron (NM_001349912, intron 1 of 5) CpG 179 NM_001367481 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr4-3516 chr4 151434490 151434700 + 10.6 0.000 intron (NM_001348694, intron 1 of 12) intron (NM_001348694, intron 1 of 12) 25419 NM_001109977 729830 Hs.633810 NM_001109977 ENSG00000164142 FAM160A1 - family with sequence similarity 160 member A1 protein-coding chr1-7142 chr1 204867745 204867955 + 10.6 0.000 intron (NM_001160332, intron 1 of 27) intron (NM_001160332, intron 1 of 27) 39196 NM_001005388 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr2-3367 chr2 2750349 2750559 + 10.6 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 375572 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr13-2542 chr13 62857942 62858152 + 10.6 0.000 Intergenic LTR51|LTR|ERV1 -50688 NR_120403 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr4-8419 chr4 152742464 152742674 + 10.6 0.000 Intergenic HERVH-int|LTR|ERV1 37161 NM_145720 201798 Hs.301243 NM_145720 ENSG00000169989 TIGD4 - tigger transposable element derived 4 protein-coding chr5-2566 chr5 26357997 26358207 + 10.6 0.000 Intergenic AluSx1|SINE|Alu 680484 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr13-2310 chr13 32264518 32264728 + 10.6 0.000 intron (NM_023037, intron 53 of 60) intron (NM_023037, intron 53 of 60) 47331 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr10-3171 chr10 79639664 79639874 + 10.6 0.000 intron (NR_134315, intron 1 of 3) MER57-int|LTR|ERV1 23416 NR_134315 105378385 Hs.737310 NR_134315 ENSG00000226676 LINC02679 - long intergenic non-protein coding RNA 2679 ncRNA chr9-3168 chr9 119066708 119066918 + 10.6 0.000 Intergenic L1PA4|LINE|L1 302622 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr22-1446 chr22 46202132 46202342 + 10.6 0.000 intron (NM_001001928, intron 3 of 7) intron (NM_001001928, intron 3 of 7) 48056 NM_207327 150383 Hs.103110 NM_207327 ENSG00000205643 CDPF1 C22orf40 cysteine rich DPF motif domain containing 1 protein-coding chr7-5236 chr7 16556339 16556549 + 10.6 0.000 intron (NM_001195280, intron 3 of 8) intron (NM_001195280, intron 3 of 8) 29619 NM_001195280 100506049 Hs.278036 NM_001195280 ENSG00000205858 LRRC72 - leucine rich repeat containing 72 protein-coding chr3-5088 chr3 46699626 46699836 + 10.6 0.000 intron (NM_001370525, intron 2 of 4) intron (NM_001370525, intron 2 of 4) -1602 NM_147196 259236 Hs.185777 NM_147196 ENSG00000181585 TMIE DFNB6 transmembrane inner ear protein-coding chrX-406 chrX 77669133 77669343 + 10.6 0.000 intron (NM_000489, intron 10 of 34) MIR3|SINE|MIR 116978 NM_000489 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr13-999 chr13 98503437 98503647 + 10.6 0.000 intron (NM_001032296, intron 2 of 10) intron (NM_001032296, intron 2 of 10) 18583 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr6-3471 chr6 2790665 2790875 + 10.6 0.000 Intergenic LTR33|LTR|ERVL -20394 NM_001347872 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr6-8305 chr6 143991675 143991885 + 10.6 0.000 intron (NM_001289040, intron 1 of 5) MER115|DNA|hAT-Tip100 16479 NM_001317161 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr4-2263 chr4 170363644 170363854 + 10.6 0.000 Intergenic L1PA2|LINE|L1 137158 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chr22-2803 chr22 42783768 42783978 + 10.6 0.000 Intergenic Intergenic -62572 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr4-6430 chr4 133256710 133256920 + 10.6 0.000 Intergenic Intergenic 107521 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr1-15970 chr1 192976384 192976594 + 10.6 0.000 Intergenic Intergenic -28232 NR_126003 102724954 Hs.243488 NR_126003 LINC01032 - long intergenic non-protein coding RNA 1032 ncRNA chr6-2424 chr6 158119104 158119314 + 10.6 0.000 intron (NM_032861, intron 11 of 16) intron (NM_032861, intron 11 of 16) 49053 NM_032861 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr11-8522 chr11 125922240 125922450 + 10.6 0.000 intron (NM_013264, intron 11 of 11) intron (NM_013264, intron 11 of 11) 17837 NM_013264 29118 Hs.420263 NM_013264 ENSG00000109832 DDX25 GRTH DEAD-box helicase 25 protein-coding chr19-6210 chr19 5835019 5835229 + 10.6 0.000 intron (NM_001369502, intron 1 of 3) intron (NM_001369502, intron 1 of 3) 3668 NM_001369505 2528 Hs.631846 NM_000150 ENSG00000156413 FUT6 FCT3A|FT1A|Fuc-TVI|FucT-VI fucosyltransferase 6 protein-coding KI270878.1-2 KI270878.1 178161 178371 + 10.6 0.000 NA NA NA NA chr2-13875 chr2 179372267 179372477 + 10.6 0.000 Intergenic MIR|SINE|MIR -107540 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr9-2362 chr9 110538156 110538366 + 10.6 0.000 intron (NM_153366, intron 3 of 47) intron (NM_153366, intron 3 of 47) 41480 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr12-7942 chr12 109251465 109251675 + 10.6 0.000 intron (NM_001093, intron 41 of 52) L1MC4a|LINE|L1 57714 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr16-2680 chr16 74269614 74269824 + 10.6 0.000 Intergenic Intergenic -27095 NM_002811 5713 Hs.440604 NM_002811 ENSG00000103035 PSMD7 MOV34|P40|Rpn8|S12 proteasome 26S subunit, non-ATPase 7 protein-coding chr11-3433 chr11 61776039 61776249 + 10.6 0.000 intron (NM_013279, intron 9 of 25) intron (NM_013279, intron 9 of 25) 16417 NR_030342 693196 NR_030342 ENSG00000284108 MIR611 MIRN611|hsa-mir-611 microRNA 611 ncRNA chr8-4473 chr8 117265440 117265650 + 10.6 0.000 Intergenic L2a|LINE|L2 130550 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr4-1194 chr4 54082916 54083126 + 10.6 0.000 Intergenic AluSx|SINE|Alu -17142 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr1-5330 chr1 226990448 226990658 + 10.6 0.000 3' UTR (NM_001366010, exon 35 of 35) 3' UTR (NM_001366010, exon 35 of 35) 50259 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr1-5319 chr1 224766444 224766654 + 10.6 0.000 Intergenic Intergenic 150232 NM_152495 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr11-5612 chr11 117560999 117561209 + 10.6 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 233250 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr9-5480 chr9 99844806 99845016 + 10.6 0.000 intron (NM_006981, intron 6 of 7) intron (NM_006981, intron 6 of 7) 23026 NM_173199 8013 Hs.279522 NM_006981 ENSG00000119508 NR4A3 CHN|CSMF|MINOR|NOR1|TEC nuclear receptor subfamily 4 group A member 3 protein-coding chr1-8737 chr1 239701045 239701255 + 10.6 0.000 intron (NM_000740, intron 3 of 4) L3|LINE|CR1 17969 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr2-3255 chr2 239978445 239978655 + 10.6 0.000 intron (NM_001322019, intron 9 of 9) intron (NM_001322019, intron 9 of 9) -35456 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr19-2359 chr19 952189 952399 + 10.6 0.000 intron (NM_005224, intron 3 of 8) AluJb|SINE|Alu 26259 NM_005224 1820 Hs.501296 NM_005224 ENSG00000116017 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT-rich interaction domain 3A protein-coding chr10-3971 chr10 116601640 116601850 + 10.6 0.000 intron (NM_006229, intron 10 of 12) intron (NM_006229, intron 10 of 12) 10732 NM_001303135 5407 Hs.73923 NM_006229 ENSG00000187021 PNLIPRP1 PLRP1 pancreatic lipase related protein 1 protein-coding chr2-6001 chr2 74558319 74558529 + 10.6 0.000 TTS (NM_001197260) TTS (NM_001197260) 4264 NM_001381 1796 Hs.103854 NM_001381 ENSG00000115325 DOK1 P62DOK|pp62 docking protein 1 protein-coding chr8-943 chr8 57741292 57741502 + 10.6 0.000 Intergenic LTR16A2|LTR|ERVL -4752 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr10-3727 chr10 114716546 114716756 + 10.6 0.000 intron (NM_001322886, intron 1 of 20) intron (NM_001322886, intron 1 of 20) -31648 NM_001322882 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr12-2973 chr12 110921309 110921519 + 10.6 0.000 promoter-TSS (NM_000432) promoter-TSS (NM_000432) -814 NM_000432 4633 Hs.75535 NM_000432 ENSG00000111245 MYL2 CMH10|MLC-2s/v|MLC2 myosin light chain 2 protein-coding chr7-4568 chr7 6441976 6442186 + 10.6 0.000 intron (NM_001142936, intron 2 of 12) MLT1L|LTR|ERVL-MaLR 5873 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr2-8216 chr2 95916404 95916614 + 10.6 0.000 intron (NM_001310154, intron 39 of 88) intron (NM_001310154, intron 39 of 88) 75315 NM_001310154 400986 Hs.646318 NM_001010914 ENSG00000174501 ANKRD36C - ankyrin repeat domain 36C protein-coding chr6-3631 chr6 125469986 125470196 + 10.6 0.000 Intergenic Intergenic -168124 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chr11-2326 chr11 68838539 68838749 + 10.6 0.000 intron (NM_001031847, intron 1 of 18) AluJr|SINE|Alu 3272 NM_001876 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chrX-1402 chrX 10636496 10636706 + 10.6 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) -16016 NM_033289 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr15-2543 chr15 43891475 43891685 + 10.6 0.000 intron (NM_001286491, intron 9 of 14) intron (NM_001286491, intron 9 of 14) -13409 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr11-7211 chr11 134332832 134333042 + 10.6 0.000 intron (NM_001370461, intron 1 of 18) intron (NM_001370461, intron 1 of 18) 949 NM_001370462 89944 Hs.436178 NM_138342 ENSG00000149328 GLB1L2 MST114|MSTP114 galactosidase beta 1 like 2 protein-coding chr7-1523 chr7 46909797 46910007 + 10.6 0.000 Intergenic Intergenic -212780 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr11-3113 chr11 33826514 33826724 + 10.6 0.000 Intergenic Intergenic 43259 NM_001142316 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr21-1946 chr21 45781243 45781453 + 10.6 0.000 intron (NM_001348243, intron 3 of 15) L1ME3|LINE|L1 33334 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr4-3787 chr4 101366427 101366637 + 10.6 0.000 Intergenic L1MEg|LINE|L1 18755 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr2-9229 chr2 218373983 218374193 + 10.6 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -6186 NR_110573 101928513 Hs.512386 NR_110573 ENSG00000225062 CATIP-AS1 - CATIP antisense RNA 1 ncRNA chr17-5882 chr17 69961403 69961613 + 10.6 0.000 promoter-TSS (NR_110874) promoter-TSS (NR_110874) -199 NR_110874 102723487 Hs.451409 NR_110874 ENSG00000237560 LINC01497 - long intergenic non-protein coding RNA 1497 ncRNA chr12-8315 chr12 129411407 129411617 + 10.6 0.000 intron (NM_133448, intron 3 of 8) AluJo|SINE|Alu 202911 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chr17-1878 chr17 44014152 44014362 + 10.6 0.000 intron (NM_001304813, intron 3 of 4) intron (NM_001304813, intron 3 of 4) 706 NM_032376 84336 Hs.514211 NM_032376 ENSG00000091947 TMEM101 - transmembrane protein 101 protein-coding chr2-5250 chr2 53423049 53423259 + 10.6 0.000 Intergenic L1PA15|LINE|L1 -344629 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr5-2103 chr5 36079390 36079600 + 10.6 0.000 Intergenic L1PA17|LINE|L1 -12613 NR_031764 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr13-1649 chr13 66405877 66406087 + 10.6 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) 187732 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr3-4398 chr3 196177450 196177660 + 10.6 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 33845 NR_135617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr1-3692 chr1 175922504 175922714 + 10.6 0.000 Intergenic LTR49|LTR|ERV1 45266 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr12-4634 chr12 43737699 43737909 + 10.6 0.000 intron (NM_001098615, intron 6 of 8) MIR|SINE|MIR 20986 NM_001098614 83448 Hs.23554 NM_031292 ENSG00000129317 PUS7L - pseudouridine synthase 7 like protein-coding chr7-4783 chr7 80218795 80219005 + 10.6 0.000 3' UTR (NM_001256414, exon 8 of 8) 3' UTR (NM_001256414, exon 8 of 8) 83116 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr19-2352 chr19 50333484 50333694 + 10.6 0.000 promoter-TSS (NR_110912) promoter-TSS (NR_110912) -53 NR_110912 3748 Hs.467146 NM_004977 ENSG00000131398 KCNC3 KSHIIID|KV3.3|SCA13 potassium voltage-gated channel subfamily C member 3 protein-coding chr11-7728 chr11 72783375 72783585 + 10.6 0.000 promoter-TSS (NR_039841) promoter-TSS (NR_039841) -50 NR_039841 100616410 NR_039841 ENSG00000265064 MIR4692 - microRNA 4692 ncRNA chr4-2529 chr4 47031571 47031781 + 10.6 0.000 exon (NM_000812, exon 1 of 9) exon (NM_000812, exon 1 of 9) 109 NM_000812 2560 Hs.27283 NM_000812 ENSG00000163288 GABRB1 EIEE45 gamma-aminobutyric acid type A receptor beta1 subunit protein-coding chr19-3147 chr19 31730343 31730553 + 10.6 0.000 Intergenic Intergenic 138167 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr4-5216 chr4 166133084 166133294 + 10.6 0.000 Intergenic L1PA10|LINE|L1 259952 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr3-4265 chr3 150447201 150447411 + 10.6 0.000 intron (NR_130136, intron 3 of 4) L2|LINE|L2 39008 NM_001303264 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr15-1489 chr15 40648954 40649164 + 10.6 0.000 intron (NM_144508, intron 17 of 25) AluSp|SINE|Alu 46046 NR_040058 100505648 Hs.586876 NR_040058 ENSG00000245849 RAD51-AS1 TODRA RAD51 antisense RNA 1 ncRNA chr11-3267 chr11 75547773 75547983 + 10.6 0.000 Intergenic L2c|LINE|L2 -14375 NM_001207014 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr11-3702 chr11 6682148 6682358 + 10.6 0.000 exon (NM_022061, exon 3 of 3) exon (NM_022061, exon 3 of 3) 1087 NM_022061 63875 Hs.523456 NM_022061 ENSG00000158042 MRPL17 L17mt|LIP2|MRP-L17|MRP-L26|RPL17L|RPML26 mitochondrial ribosomal protein L17 protein-coding chr3-2465 chr3 111989147 111989357 + 10.6 0.000 intron (NR_073571, intron 2 of 2) intron (NR_073571, intron 2 of 2) -9487 NM_013259 29114 Hs.169330 NM_013259 ENSG00000144834 TAGLN3 NP22|NP24|NP25 transgelin 3 protein-coding chr6-5691 chr6 117132910 117133120 + 10.6 0.000 Intergenic MLT2A1|LTR|ERVL -132543 NM_153453 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr8-3959 chr8 48324308 48324518 + 10.6 0.000 Intergenic Intergenic -227154 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr17-5009 chr17 82507731 82507941 + 10.6 0.000 Intergenic LOR1a|LTR|ERV1 -11896 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr7-8822 chr7 84774468 84774678 + 10.6 0.000 Intergenic Intergenic 242097 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr4-3128 chr4 169724395 169724605 + 10.6 0.000 TTS (NM_001243372) TTS (NM_001243372) 33444 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr2-4642 chr2 181780285 181780495 + 10.6 0.000 Intergenic Intergenic -99725 NM_002500 4760 Hs.574626 NM_002500 ENSG00000162992 NEUROD1 BETA2|BHF-1|MODY6|NEUROD|bHLHa3 neuronal differentiation 1 protein-coding chr5-2385 chr5 94174795 94175005 + 10.6 0.000 intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) -63201 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr3-1879 chr3 129558827 129559037 + 10.6 0.000 intron (NM_015103, intron 32 of 35) intron (NM_015103, intron 32 of 35) 10547 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr7-7086 chr7 155644848 155645058 + 10.6 0.000 promoter-TSS (NR_126344) promoter-TSS (NR_126344) 292 NM_053043 155435 Hs.591815 NM_053043 ENSG00000184863 RBM33 PRR8 RNA binding motif protein 33 protein-coding chr10-4671 chr10 129181044 129181254 + 10.6 0.000 Intergenic L3|LINE|CR1 268316 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr4-3150 chr4 181864071 181864281 + 10.6 0.000 Intergenic Intergenic -34203 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr14-1428 chr14 72961524 72961734 + 10.6 0.000 3' UTR (NM_001352448, exon 14 of 14) 3' UTR (NM_001352448, exon 14 of 14) 25327 NM_178441 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr21-1483 chr21 38144989 38145199 + 10.6 0.000 intron (NR_026839, intron 2 of 2) L1MC1|LINE|L1 23643 NR_026839 84677 Hs.733345 NM_032589 ENSG00000198054 DSCR8 C21orf65|CT25.1a|CT25.1b|MMA-1|MMA-1a|MMA-1b|MMA1|MTAG2 Down syndrome critical region 8 ncRNA chr2-6798 chr2 51813240 51813450 + 10.6 0.000 intron (NR_135237, intron 6 of 10) intron (NR_135237, intron 6 of 10) -557303 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr14-2153 chr14 88834988 88835198 + 10.6 0.000 intron (NM_144596, intron 3 of 15) intron (NM_144596, intron 3 of 15) 10442 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr5-5533 chr5 145325379 145325589 + 10.6 0.000 Intergenic Intergenic 509858 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr7-2474 chr7 1978876 1979086 + 10.6 0.000 intron (NM_001013837, intron 15 of 18) intron (NM_001013837, intron 15 of 18) -38410 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr7-2131 chr7 33976830 33977040 + 10.6 0.000 intron (NM_133468, intron 7 of 15) intron (NM_133468, intron 7 of 15) 71396 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr3-3745 chr3 1218080 1218290 + 10.6 0.000 intron (NM_001289080, intron 2 of 22) intron (NM_001289080, intron 2 of 22) 125161 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr3-6272 chr3 71449387 71449597 + 10.6 0.000 intron (NR_146142, intron 3 of 19) intron (NR_146142, intron 3 of 19) 92597 NR_031697 100302112 NR_031697 ENSG00000221264 MIR1284 MIRN1284|hsa-mir-1284|mir-1284 microRNA 1284 ncRNA chr4-2570 chr4 94460828 94461038 + 10.6 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 8991 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr2-5516 chr2 149219523 149219733 + 10.6 0.000 Intergenic Intergenic 101454 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr19-4025 chr19 4545082 4545292 + 10.6 0.000 intron (NM_032108, intron 16 of 16) AluSx|SINE|Alu -5151 NM_052972 116844 Hs.655559 NM_052972 ENSG00000171236 LRG1 HMFT1766|LRG leucine rich alpha-2-glycoprotein 1 protein-coding chr19-2307 chr19 11137761 11137971 + 10.6 0.000 Intergenic Intergenic 17916 NM_001317033 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr2-2968 chr2 30711736 30711946 + 10.6 0.000 Intergenic LTR41C|LTR|ERVL 95605 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr11-6356 chr11 63962974 63963184 + 10.6 0.000 Intergenic AluSx|SINE|Alu -11541 NM_004074 1351 Hs.743989 NM_004074 ENSG00000176340 COX8A COX|COX8|COX8-2|COX8L|VIII|VIII-L cytochrome c oxidase subunit 8A protein-coding chr1-5079 chr1 109201252 109201462 + 10.6 0.000 intron (NM_020775, intron 21 of 21) intron (NM_020775, intron 21 of 21) -12536 NM_001330669 6301 Hs.531176 NM_006513 ENSG00000031698 SARS NEDMAS|SERRS|SERS seryl-tRNA synthetase protein-coding chr6-2847 chr6 2147701 2147911 + 10.6 0.000 intron (NM_001500, intron 1 of 10) intron (NM_001500, intron 1 of 10) 28185 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr15-1724 chr15 25193559 25193769 + 10.6 0.000 TTS (NR_003305) TTS (NR_003305) 343 NR_003305 100033450 NR_003305 ENSG00000273835 SNORD115-13 HBII-52-13 small nucleolar RNA, C/D box 115-13 snoRNA chr13-2766 chr13 99171559 99171769 + 10.6 0.000 Intergenic L1PA6|LINE|L1 29091 NR_036532 100289373 Hs.225914 NR_036531 ENSG00000228889 UBAC2-AS1 - UBAC2 antisense RNA 1 ncRNA chr7-1894 chr7 151232317 151232527 + 10.6 0.000 promoter-TSS (NM_001284295) promoter-TSS (NM_001284295) -61 NM_001284295 54480 Hs.647084 NM_019015 ENSG00000033100 CHPF2 CSGLCA-T|CSGlcAT|ChSy-3|chPF-2 chondroitin polymerizing factor 2 protein-coding chr3-7830 chr3 107497987 107498197 + 10.6 0.000 Intergenic Mam_R4|LINE|Dong-R4 -24870 NM_020235 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr4-3093 chr4 152961502 152961712 + 10.6 0.000 intron (NM_001371116, intron 6 of 11) intron (NM_001371116, intron 6 of 11) 18624 NM_033393 85462 Hs.132629 NM_033393 ENSG00000137460 FHDC1 - FH2 domain containing 1 protein-coding chr9-3749 chr9 122554372 122554582 + 10.6 0.000 TTS (NM_001004457) TTS (NM_001004457) 1365 NM_001004457 138882 Hs.632682 NM_001004457 ENSG00000171501 OR1N2 OR9-23 olfactory receptor family 1 subfamily N member 2 protein-coding chr18-1151 chr18 11114756 11114966 + 10.6 0.000 intron (NM_022068, intron 1 of 51) intron (NM_022068, intron 1 of 51) 33901 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr8-3751 chr8 22936450 22936660 + 10.6 0.000 intron (NM_001363233, intron 1 of 6) L1M4c|LINE|L1 4522 NM_001363233 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr5-5335 chr5 130277602 130277812 + 10.6 0.000 Intergenic MER52A|LTR|ERV1 373242 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr20-980 chr20 49394331 49394541 + 10.6 0.000 intron (NM_004975, intron 1 of 1) intron (NM_004975, intron 1 of 1) 88232 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr13-2584 chr13 72354347 72354557 + 10.6 0.000 Intergenic MSTA|LTR|ERVL-MaLR 373177 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr12-3424 chr12 109945116 109945326 + 10.6 0.000 intron (NM_057170, intron 14 of 17) intron (NM_057170, intron 14 of 17) 44644 NM_032300 84260 Hs.410924 NM_032300 ENSG00000139437 TCHP TpMs trichoplein keratin filament binding protein-coding chr13-2235 chr13 25076068 25076278 + 10.6 0.000 Intergenic AluJb|SINE|Alu -19965 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr2-9251 chr2 219334294 219334504 + 10.6 0.000 Intergenic L1MEb|LINE|L1 -1222 NM_001007089 389075 Hs.290551 NM_001007089 ENSG00000182698 RESP18 - regulated endocrine specific protein 18 protein-coding chr8-2788 chr8 121145379 121145589 + 10.6 0.000 Intergenic Intergenic -333438 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr12-4508 chr12 23083375 23083585 + 10.6 0.000 Intergenic Intergenic -92156 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr6-3714 chr6 597405 597615 + 10.6 0.000 intron (NM_018303, intron 10 of 27) intron (NM_018303, intron 10 of 27) 59454 NM_148959 135458 Hs.669039 NM_148959 ENSG00000188996 HUS1B - HUS1 checkpoint clamp component B protein-coding chr13-2104 chr13 84831061 84831271 + 10.6 0.000 Intergenic Intergenic 47512 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr2-8840 chr2 172861325 172861535 + 10.6 0.000 intron (NM_001282899, intron 1 of 27) intron (NM_001282899, intron 1 of 27) 1392 NM_001282900 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr10-4198 chr10 102819318 102819528 + 10.6 0.000 Intergenic Intergenic 17990 NM_000102 1586 Hs.438016 NM_000102 ENSG00000148795 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450 family 17 subfamily A member 1 protein-coding chr11-3247 chr11 73264691 73264901 + 10.6 0.000 promoter-TSS (NM_001277206) promoter-TSS (NM_001277206) 244 NM_001277207 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr20-3611 chr20 5999133 5999343 + 10.6 0.000 TTS (NM_032485) TTS (NM_032485) 6583 NR_110101 101929225 Hs.635771 NR_110101 ENSG00000278719 MCM8-AS1 - MCM8 antisense RNA 1 ncRNA chr9-5565 chr9 111450457 111450667 + 10.6 0.000 intron (NM_001363756, intron 2 of 48) intron (NM_001363756, intron 2 of 48) 33000 NM_001364931 23392 Hs.368255 NM_001080398 ENSG00000136813 ECPAS ECM29|KIAA0368 Ecm29 proteasome adaptor and scaffold protein-coding chr11-8422 chr11 103987957 103988167 + 10.6 0.000 intron (NM_025208, intron 3 of 6) intron (NM_025208, intron 3 of 6) -48578 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr2-6608 chr2 237073671 237073881 + 10.6 0.000 Intergenic Intergenic -11665 NM_198189 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr6-7642 chr6 81054238 81054448 + 10.6 0.000 Intergenic Intergenic 698338 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chrX-1211 chrX 71941068 71941278 + 10.6 0.000 intron (NM_001013627, intron 1 of 7) MLT1M|LTR|ERVL-MaLR 30085 NM_001013627 340527 Hs.397836 NM_001013627 ENSG00000204131 NHSL2 - NHS like 2 protein-coding chr21-640 chr21 9839235 9839445 + 10.6 0.000 Intergenic SST1|Satellite|centr -18279 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr8-4447 chr8 113934825 113935035 + 10.6 0.000 Intergenic HERVL-int|LTR|ERVL -497991 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr20-831 chr20 9035165 9035375 + 10.6 0.000 Intergenic Intergenic -33784 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr4-4594 chr4 76570770 76570980 + 10.6 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) -2693 NR_039654 100616299 NR_039654 ENSG00000263445 MIR4450 mir-4450 microRNA 4450 ncRNA chr9-2088 chr9 78029627 78029837 + 10.5 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 2079 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chrX-627 chrX 101407396 101407606 + 10.5 0.000 promoter-TSS (NM_001032393) promoter-TSS (NM_001032393) 512 NM_000169 2717 Hs.69089 NM_000169 ENSG00000102393 GLA GALA galactosidase alpha protein-coding chr11-3573 chr11 57651571 57651781 + 10.5 0.000 Intergenic MLT2A2|LTR|ERVL -1732 NM_001363487 219539 Hs.135978 NM_145008 ENSG00000166793 YPEL4 - yippee like 4 protein-coding chrX-724 chrX 151901806 151902016 + 10.5 0.000 Intergenic MIRb|SINE|MIR 9172 NR_136578 105373368 Hs.256904 NR_136578 MAGEA4-AS1 - MAGEA4 antisense RNA 1 ncRNA chr9-4579 chr9 93372869 93373079 + 10.5 0.000 Intergenic Intergenic -26560 NM_001098808 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr12-1493 chr12 27185608 27185818 + 10.5 0.000 Intergenic Intergenic -58573 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr3-1907 chr3 160169214 160169424 + 10.5 0.000 intron (NR_108088, intron 3 of 9) L2|LINE|L2 37773 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr15-2414 chr15 68026059 68026269 + 10.5 0.000 Intergenic Intergenic -28015 NM_016166 8554 Hs.162458 NM_016166 ENSG00000033800 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT 1 protein-coding chr3-4035 chr3 70736108 70736318 + 10.5 0.000 Intergenic Intergenic 328711 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr11-6599 chr11 73012405 73012615 + 10.5 0.000 intron (NM_014824, intron 4 of 19) intron (NM_014824, intron 4 of 19) 129808 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr2-8696 chr2 152134657 152134867 + 10.5 0.000 intron (NM_005843, intron 8 of 13) MIRb|SINE|MIR -35595 NM_001145798 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr19-2735 chr19 36060529 36060739 + 10.5 0.000 intron (NM_001083961, intron 3 of 31) L2a|LINE|L2 5737 NM_173636 284403 Hs.116244 NM_173636 ENSG00000075702 WDR62 C19orf14|MCPH2 WD repeat domain 62 protein-coding chr11-1932 chr11 74024821 74025031 + 10.5 0.000 intron (NM_001286577, intron 32 of 32) MER81|DNA|hAT-Blackjack -15689 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr8-2473 chr8 133359668 133359878 + 10.5 0.000 Intergenic MIRb|SINE|MIR -62469 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr10-1716 chr10 79317066 79317276 + 10.5 0.000 TTS (NM_020338) TTS (NM_020338) -30298 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr4-2394 chr4 56947758 56947968 + 10.5 0.000 Intergenic MER41A|LTR|ERV1 29743 NM_032313 84273 Hs.8715 NM_032313 ENSG00000084092 NOA1 C4orf14|MTG3|hAtNOS1|hNOA1|mAtNOS1 nitric oxide associated 1 protein-coding chr8-1248 chr8 129697915 129698125 + 10.5 0.000 Intergenic Intergenic -17781 NR_130917 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr2-8947 chr2 187725366 187725576 + 10.5 0.000 Intergenic L1PA14|LINE|L1 -170966 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr11-10657 chr11 127193933 127194143 + 10.5 0.000 Intergenic Intergenic -77032 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr6-3980 chr6 109339226 109339436 + 10.5 0.000 intron (NR_152435, intron 39 of 45) intron (NR_152435, intron 39 of 45) 42408 NM_001346500 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr12-3125 chr12 32025709 32025919 + 10.5 0.000 Intergenic HERVIP10F-int|LTR|ERV1 66399 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 RESF1 C12orf35|GET|KIAA1551|UTA2-1 retroelement silencing factor 1 protein-coding chr9-2302 chr9 135184401 135184611 + 10.5 0.000 non-coding (NR_046107, exon 3 of 3) non-coding (NR_046107, exon 3 of 3) 2897 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chr3-1279 chr3 20040777 20040987 + 10.5 0.000 intron (NM_003884, intron 1 of 17) CpG 436 NM_003884 8850 Hs.533055 NM_003884 ENSG00000114166 KAT2B CAF|P/CAF|PCAF lysine acetyltransferase 2B protein-coding chr2-5458 chr2 127122545 127122755 + 10.5 0.000 Intergenic Intergenic -15496 NM_139345 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr7-5429 chr7 36576046 36576256 + 10.5 0.000 intron (NM_001177507, intron 12 of 19) intron (NM_001177507, intron 12 of 19) 23969 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr2-11043 chr2 111305022 111305232 + 10.5 0.000 intron (NR_136165, intron 2 of 3) MLT1C|LTR|ERVL-MaLR 15959 NR_039636 100616341 NR_039636 ENSG00000266139 MIR4435-2 mir-4435-2 microRNA 4435-2 ncRNA chr2-3579 chr2 47091312 47091522 + 10.5 0.000 intron (NM_001163561, intron 5 of 6) intron (NM_001163561, intron 5 of 6) 63891 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr11-3486 chr11 96311027 96311237 + 10.5 0.000 intron (NM_032427, intron 1 of 4) MIRb|SINE|MIR -30306 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr18-2799 chr18 3462975 3463185 + 10.5 0.000 Intergenic Intergenic -3170 NR_110429 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr18-634 chr18 23106907 23107117 + 10.5 0.000 Intergenic Intergenic -27552 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr7-5220 chr7 13874481 13874691 + 10.5 0.000 Intergenic L3|LINE|CR1 111928 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr5-3960 chr5 7853690 7853900 + 10.5 0.000 Intergenic LTR16E1|LTR|ERVL -2662 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding chr17-2238 chr17 5885508 5885718 + 10.5 0.000 intron (NR_040000, intron 2 of 3) L2b|LINE|L2 113379 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr3-4375 chr3 188689287 188689497 + 10.5 0.000 TTS (NR_029502) TTS (NR_029502) 611 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr8-1599 chr8 142738808 142739018 + 10.5 0.000 Intergenic Intergenic 3493 NM_020427 57152 Hs.103505 NM_020427 ENSG00000126233 SLURP1 ANUP|ARS|ArsB|LY6-MT|LY6LS|MDM secreted LY6/PLAUR domain containing 1 protein-coding chr22-2730 chr22 39126769 39126979 + 10.5 0.000 Intergenic LTR47A2|LTR|ERVL 25806 NM_001346743 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr14-2300 chr14 69847238 69847448 + 10.5 0.000 Intergenic L1MC3|LINE|L1 -32073 NM_022137 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding chr2-6057 chr2 131659741 131659951 + 10.5 0.000 Intergenic Intergenic -22653 NM_001354872 29798 Hs.635289 NM_013310 C2orf27A C2orf27|C2orf27B chromosome 2 open reading frame 27A protein-coding chr14-818 chr14 100776794 100777004 + 10.5 0.000 Intergenic Intergenic -37592 NR_039729 100616495 NR_039729 ENSG00000266461 MIR2392 - microRNA 2392 ncRNA chr21-777 chr21 44940336 44940546 + 10.5 0.000 promoter-TSS (NR_027128) promoter-TSS (NR_027128) 412 NM_058190 85395 Hs.410830 NM_058190 ENSG00000160256 FAM207A C21orf70|PRED56 family with sequence similarity 207 member A protein-coding chr20-2576 chr20 37538145 37538355 + 10.5 0.000 Intergenic Intergenic -10319 NM_001167820 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr13-1029 chr13 57631037 57631247 + 10.5 0.000 promoter-TSS (NM_001040429) promoter-TSS (NM_001040429) -602 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr8-1724 chr8 140598431 140598641 + 10.5 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 37097 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr17-4798 chr17 49854466 49854676 + 10.5 0.000 Intergenic Intergenic -6554 NM_001077506 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr20-2786 chr20 54828908 54829118 + 10.5 0.000 Intergenic Intergenic 353420 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr7-8662 chr7 71623511 71623721 + 10.5 0.000 intron (NM_022479, intron 6 of 10) AluSz|SINE|Alu -315846 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr2-3499 chr2 215357072 215357282 + 10.5 0.000 Intergenic Intergenic 45118 NM_004044 471 Hs.90280 NM_004044 ENSG00000138363 ATIC AICAR|AICARFT|HEL-S-70p|IMPCHASE|PURH 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding chr13-1286 chr13 28497821 28498031 + 10.5 0.000 Intergenic Intergenic -2798 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr12-2757 chr12 47976750 47976960 + 10.5 0.000 exon (NM_001844, exon 48 of 54) exon (NM_001844, exon 48 of 54) 13259 NM_001143842 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr3-4831 chr3 142100182 142100392 + 10.5 0.000 intron (NM_001178139, intron 2 of 12) intron (NM_001178139, intron 2 of 12) 49257 NM_001178139 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr13-2752 chr13 98434073 98434283 + 10.5 0.000 intron (NM_005766, intron 18 of 26) intron (NM_005766, intron 18 of 26) 87947 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr20-1704 chr20 36646108 36646318 + 10.5 0.000 promoter-TSS (NM_032214) promoter-TSS (NM_032214) -17 NM_175077 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr3-9332 chr3 45723633 45723843 + 10.5 0.000 intron (NM_001319071, intron 11 of 19) L1MB4|LINE|L1 34342 NM_001319073 22908 Hs.156509 NM_014016 ENSG00000211456 SACM1L SAC1 SAC1 like phosphatidylinositide phosphatase protein-coding chr5-3139 chr5 61083083 61083293 + 10.5 0.000 intron (NM_174889, intron 2 of 3) L1PA17|LINE|L1 -79128 NR_109908 101928630 Hs.575209 NR_109908 SMIM15-AS1 CTC-436P18.1 SMIM15 antisense RNA 1 ncRNA chr14-4583 chr14 49941042 49941252 + 10.5 0.000 Intergenic Intergenic -25252 NR_106724 102464828 NR_106724 ENSG00000278038 MIR6076 hsa-mir-6076 microRNA 6076 ncRNA chr4-2545 chr4 73383269 73383479 + 10.5 0.000 Intergenic L1MC1|LINE|L1 -20913 NM_000477 213 Hs.418167 NM_000477 ENSG00000163631 ALB HSA|PRO0883|PRO0903|PRO1341 albumin protein-coding chr10-1420 chr10 132942308 132942518 + 10.5 0.000 intron (NM_001200049, intron 1 of 57) CpG 157 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr3-5435 chr3 172869892 172870102 + 10.5 0.000 Intergenic Intergenic 118995 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr1-11447 chr1 78872765 78872975 + 10.5 0.000 Intergenic HERVH-int|LTR|ERV1 133860 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr3-3433 chr3 126535588 126535798 + 10.5 0.000 intron (NR_130715, intron 4 of 5) intron (NR_130715, intron 4 of 5) 11538 NM_152889 166012 Hs.292375 NM_152889 ENSG00000180767 CHST13 C4ST3 carbohydrate sulfotransferase 13 protein-coding chr10-8495 chr10 89861719 89861929 + 10.5 0.000 intron (NR_149080, intron 1 of 1) L2b|LINE|L2 7918 NR_149080 105378425 Hs.559891 NR_149079 ENSG00000280560 LINC01374 TCONS_00018278 long intergenic non-protein coding RNA 1374 ncRNA chr18-2873 chr18 9704389 9704599 + 10.5 0.000 Intergenic Intergenic -3807 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr20-1334 chr20 63910990 63911200 + 10.5 0.000 intron (NM_025219, intron 1 of 4) intron (NM_025219, intron 1 of 4) -8354 NR_030637 100126329 NR_030637 ENSG00000283206 MIR941-1 MIRN941-1|mir-941-1 microRNA 941-1 ncRNA chr2-8391 chr2 113084256 113084466 + 10.5 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 12043 NM_032556 84639 Hs.306974 NM_032556 ENSG00000136697 IL1F10 FIL1-theta|FKSG75|IL-1HY2|IL-38|IL1-theta|IL1HY2 interleukin 1 family member 10 protein-coding chr7-5132 chr7 5371381 5371591 + 10.5 0.000 intron (NM_001080495, intron 10 of 29) intron (NM_001080495, intron 10 of 29) 52060 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr3-3262 chr3 58414631 58414841 + 10.5 0.000 intron (NM_017771, intron 17 of 17) intron (NM_017771, intron 17 of 17) 19096 NM_000925 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr3-4034 chr3 70684006 70684216 + 10.5 0.000 Intergenic Intergenic -371473 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr7-2217 chr7 118151761 118151971 + 10.5 0.000 Intergenic L2a|LINE|L2 -32298 NM_016200 51691 Hs.655046 NM_016200 ENSG00000128534 LSM8 NAA38 LSM8 homolog, U6 small nuclear RNA associated protein-coding chr1-7579 chr1 217840378 217840588 + 10.5 0.000 intron (NM_138796, intron 9 of 10) intron (NM_138796, intron 9 of 10) -52417 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chr13-3109 chr13 61578857 61579067 + 10.5 0.000 Intergenic Intergenic -151016 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr8-2632 chr8 68175051 68175261 + 10.5 0.000 intron (NM_024870, intron 35 of 39) L2c|LINE|L2 -155217 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr3-3481 chr3 188133238 188133448 + 10.5 0.000 Intergenic Intergenic -20555 NM_001167672 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr20-1622 chr20 15656237 15656447 + 10.5 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 266972 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr20-1029 chr20 32904795 32905005 + 10.5 0.000 intron (NM_001143967, intron 11 of 26) AluSx|SINE|Alu 45977 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr7-3735 chr7 69047372 69047582 + 10.5 0.000 Intergenic Intergenic 550147 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chrX-438 chrX 70479263 70479473 + 10.5 0.000 intron (NM_020730, intron 4 of 13) intron (NM_020730, intron 4 of 13) -23374 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr16-1464 chr16 88434568 88434778 + 10.5 0.000 exon (NM_001367624, exon 1 of 1) exon (NM_001367624, exon 1 of 1) 7202 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr12-2856 chr12 6205335 6205545 + 10.5 0.000 intron (NM_001769, intron 1 of 7) intron (NM_001769, intron 1 of 7) 5040 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr4-7116 chr4 35461384 35461594 + 10.5 0.000 Intergenic L1M1|LINE|L1 782450 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr15-1126 chr15 40956834 40957044 + 10.5 0.000 TTS (NM_024111) TTS (NM_024111) 3468 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr20-1889 chr20 50313301 50313511 + 10.5 0.000 non-coding (NR_034124, exon 5 of 5) non-coding (NR_034124, exon 5 of 5) 7936 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr22-1013 chr22 24102163 24102373 + 10.5 0.000 intron (NM_012295, intron 26 of 36) intron (NM_012295, intron 26 of 36) -79219 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr2-6546 chr2 215794013 215794223 + 10.5 0.000 intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 49418 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr11-5231 chr11 19924626 19924836 + 10.5 0.000 intron (NM_182964, intron 6 of 37) intron (NM_182964, intron 6 of 37) -97825 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr6-4300 chr6 14988160 14988370 + 10.5 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -257804 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr21-725 chr21 36392376 36392586 + 10.5 0.000 intron (NM_005441, intron 4 of 13) SVA_B|Retroposon|SVA 7089 NM_005441 8208 Hs.75238 NM_005441 ENSG00000159259 CHAF1B CAF-1|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7|MPP7 chromatin assembly factor 1 subunit B protein-coding chr1-8171 chr1 18203438 18203648 + 10.5 0.000 intron (NM_032880, intron 1 of 9) AluSz|SINE|Alu 95745 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr11-3207 chr11 66454077 66454287 + 10.5 0.000 Intergenic Intergenic -12145 NM_001243135 246330 Hs.656875 NM_145065 ENSG00000174516 PELI3 - pellino E3 ubiquitin protein ligase family member 3 protein-coding chrX-1149 chrX 40539597 40539807 + 10.5 0.000 Intergenic LTR16A|LTR|ERVL -41268 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chr5-3338 chr5 134092912 134093122 + 10.5 0.000 Intergenic Intergenic -21664 NM_003202 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr6-3256 chr6 149519240 149519450 + 10.5 0.000 intron (NM_139126, intron 10 of 12) MIR1_Amn|SINE|MIR 26698 NM_139126 85313 Hs.744238 NM_139126 ENSG00000131013 PPIL4 HDCME13P peptidylprolyl isomerase like 4 protein-coding chr12-4969 chr12 76176979 76177189 + 10.5 0.000 Intergenic Intergenic -82799 NR_146531 105369848 NR_146531 LNCOG LINC02407|lncRNA-OG lncRNA osteogenesis associated ncRNA chr8-2263 chr8 77183176 77183386 + 10.5 0.000 Intergenic Intergenic -182237 NM_001172087 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding chr2-12944 chr2 102401567 102401777 + 10.5 0.000 Intergenic Intergenic -17118 NM_003853 8807 Hs.158315 NM_003853 ENSG00000115607 IL18RAP ACPL|CD218b|CDw218b|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1R-7|IL-1R7|IL-1RAcPL|IL18RB interleukin 18 receptor accessory protein protein-coding chr5-2895 chr5 118447493 118447703 + 10.5 0.000 intron (NR_104610, intron 9 of 9) L2a|LINE|L2 114519 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chr9-8037 chr9 95672652 95672862 + 10.5 0.000 Intergenic Intergenic -155700 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr6-3929 chr6 81865716 81865926 + 10.5 0.000 intron (NR_149135, intron 3 of 3) intron (NR_149135, intron 3 of 3) -51629 NR_126363 101928770 Hs.586239 NR_126363 ENSG00000224995 LINC01526 Lnc-FAM46A-1 long intergenic non-protein coding RNA 1526 ncRNA chr12-4040 chr12 48979879 48980089 + 10.5 0.000 intron (NM_005430, intron 2 of 3) CpG-5498 1662 NM_005430 7471 Hs.248164 NM_005430 ENSG00000125084 WNT1 BMND16|INT1|OI15 Wnt family member 1 protein-coding chr9-8420 chr9 121062485 121062695 + 10.5 0.000 intron (NM_001317163, intron 1 of 40) intron (NM_001317163, intron 1 of 40) 12275 NM_001317163 727 Hs.494997 NM_001735 ENSG00000106804 C5 C5D|C5a|C5b|CPAMD4|ECLZB complement C5 protein-coding chr14-743 chr14 51657890 51658100 + 10.5 0.000 intron (NM_001267046, intron 1 of 13) MIR3|SINE|MIR 6085 NM_152330 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr19-1283 chr19 45492998 45493208 + 10.5 0.000 intron (NM_206900, intron 4 of 9) intron (NM_206900, intron 4 of 9) 150 NM_206901 6253 Hs.47517 NM_005619 ENSG00000125744 RTN2 NSP2|NSPL1|NSPLI|SPG12 reticulon 2 protein-coding chr2-11844 chr2 20145972 20146182 + 10.5 0.000 Intergenic Intergenic 79053 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr13-1561 chr13 32643108 32643318 + 10.5 0.000 intron (NM_015032, intron 1 of 34) intron (NM_015032, intron 1 of 34) 56761 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr6-3797 chr6 25849412 25849622 + 10.5 0.000 intron (NM_006632, intron 9 of 11) intron (NM_006632, intron 9 of 11) -17465 NM_005074 6568 Hs.205816 NM_005074 ENSG00000124568 SLC17A1 NAPI-1|NPT-1|NPT1 solute carrier family 17 member 1 protein-coding chr5-5455 chr5 138505776 138505986 + 10.5 0.000 TTS (NM_001291974) TTS (NM_001291974) 35830 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr13-978 chr13 39910936 39911146 + 10.5 0.000 Intergenic Intergenic -246906 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr5-6879 chr5 126351239 126351449 + 10.5 0.000 Intergenic Intergenic -8776 NM_001146319 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr2-3521 chr2 233974770 233974980 + 10.5 0.000 intron (NM_024080, intron 17 of 25) (AG)n|Simple_repeat|Simple_repeat 57502 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|LTrpC-6|TRPP8|trp-p8 transient receptor potential cation channel subfamily M member 8 protein-coding chr21-1695 chr21 29538073 29538283 + 10.5 0.000 intron (NM_001330993, intron 15 of 16) intron (NM_001330993, intron 15 of 16) 42131 NR_146594 54147 Hs.124532 NR_146594 ENSG00000234293 BACH1-IT3 C21orf8|NCRNA00097 BACH1 intronic transcript 3 ncRNA chr13-4367 chr13 107099853 107100063 + 10.5 0.000 Intergenic Intergenic 221005 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chr4-2971 chr4 113603977 113604187 + 10.5 0.000 intron (NM_001221, intron 4 of 18) intron (NM_001221, intron 4 of 18) 157656 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr3-4460 chr3 46225038 46225248 + 10.5 0.000 Intergenic L1ME3|LINE|L1 -16830 NM_001295 1230 Hs.301921 NM_001295 ENSG00000163823 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 C-C motif chemokine receptor 1 protein-coding chr9-7378 chr9 17778238 17778448 + 10.5 0.000 intron (NM_003026, intron 3 of 8) L2a|LINE|L2 199277 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr18-1232 chr18 46618083 46618293 + 10.5 0.000 intron (NM_144612, intron 5 of 39) intron (NM_144612, intron 5 of 39) 38845 NM_144612 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr3-7181 chr3 188472458 188472668 + 10.5 0.000 intron (NM_001167672, intron 2 of 9) intron (NM_001167672, intron 2 of 9) 96103 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr4-2210 chr4 138054020 138054230 + 10.5 0.000 intron (NR_037866, intron 7 of 10) intron (NR_037866, intron 7 of 10) -34889 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr10-4934 chr10 24603274 24603484 + 10.5 0.000 intron (NM_001367447, intron 11 of 24) L2b|LINE|L2 19464 NR_160024 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr3-3919 chr3 48492848 48493058 + 10.5 0.000 intron (NM_001272065, intron 2 of 5) MLT1A|LTR|ERVL-MaLR 11097 NM_001272068 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr13-825 chr13 43915509 43915719 + 10.5 0.000 Intergenic ERVL-E-int|LTR|ERVL 35710 NM_153218 144811 Hs.210586 NM_153218 ENSG00000179630 LACC1 C13orf31|FAMIN laccase domain containing 1 protein-coding chr17-4814 chr17 51544512 51544722 + 10.5 0.000 Intergenic L2a|LINE|L2 109190 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr1-12855 chr1 101666614 101666824 + 10.5 0.000 Intergenic Intergenic 180361 NM_001288821 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chrX-1858 chrX 112846049 112846259 + 10.5 0.000 Intergenic Intergenic -5323 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chrX-2437 chrX 79024501 79024711 + 10.5 0.000 Intergenic L1MA1|LINE|L1 79215 NM_001324221 27334 Hs.296433 NM_014499 ENSG00000078589 P2RY10 LYPSR2|P2Y10 P2Y receptor family member 10 protein-coding chr19-1713 chr19 42293090 42293300 + 10.5 0.000 exon (NM_015125, exon 15 of 20) exon (NM_015125, exon 15 of 20) 8530 NM_015125 23152 Hs.388236 NM_015125 ENSG00000079432 CIC MRD45 capicua transcriptional repressor protein-coding chr10-3494 chr10 69355433 69355643 + 10.5 0.000 intron (NM_033496, intron 2 of 17) AluSx|SINE|Alu 36691 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr1-10095 chr1 95924559 95924769 + 10.5 0.000 Intergenic Intergenic -67404 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr5-1142 chr5 134577449 134577659 + 10.5 0.000 intron (NM_001289985, intron 11 of 11) AluJb|SINE|Alu 51446 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr9-5251 chr9 78786599 78786809 + 10.5 0.000 Intergenic MamGypLTR1a|LTR|Gypsy 358962 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr18-3425 chr18 63852871 63853081 + 10.5 0.000 Intergenic LTR5B|LTR|ERVK -34729 NM_001143818 5055 Hs.594481 NM_002575 ENSG00000197632 SERPINB2 HsT1201|PAI|PAI-2|PAI2|PLANH2 serpin family B member 2 protein-coding chrX-1689 chrX 9382490 9382700 + 10.5 0.000 Intergenic Intergenic -80700 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr17-8281 chr17 67914424 67914634 + 10.5 0.000 intron (NM_182641, intron 11 of 27) intron (NM_182641, intron 11 of 27) 79077 NM_181655 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr16-4917 chr16 89472236 89472446 + 10.5 0.000 intron (NM_001256182, intron 1 of 13) intron (NM_001256182, intron 1 of 13) 18220 NR_045839 29123 Hs.335003 NM_013275 ENSG00000167522 ANKRD11 ANCO-1|ANCO1|LZ16|T13 ankyrin repeat domain 11 protein-coding chr11-10744 chr11 133123606 133123816 + 10.5 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -179943 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr18-2847 chr18 7918782 7918992 + 10.5 0.000 intron (NM_002845, intron 4 of 30) L1MA4|LINE|L1 351571 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr8-6372 chr8 53514462 53514672 + 10.5 0.000 non-coding (NR_149032, exon 2 of 2) non-coding (NR_149032, exon 2 of 2) 9398 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr2-7801 chr2 44068508 44068718 + 10.5 0.000 Intergenic Intergenic -72624 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr1-8911 chr1 6457214 6457424 + 10.5 0.000 intron (NM_031475, intron 11 of 12) L3|LINE|CR1 8876 NM_148965 8718 Hs.462529 NM_003790 ENSG00000215788 TNFRSF25 APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR TNF receptor superfamily member 25 protein-coding chr10-2691 chr10 101276037 101276247 + 10.5 0.000 Intergenic MIR|SINE|MIR -12592 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr4-2457 chr4 183335367 183335577 + 10.5 0.000 Intergenic Intergenic -13046 NM_001185149 100132463 Hs.727475 NM_001185149 ENSG00000185758 CLDN24 CLDN21 claudin 24 protein-coding chr15-2958 chr15 49674249 49674459 + 10.5 0.000 Intergenic Intergenic 53306 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr3-3346 chr3 15264584 15264794 + 10.5 0.000 TTS (NR_046084) TTS (NR_046084) 10505 NR_046084 100505696 Hs.745026 NR_046084 ENSG00000224660 SH3BP5-AS1 - SH3BP5 antisense RNA 1 ncRNA chr5-2567 chr5 32522824 32523034 + 10.5 0.000 Intergenic Intergenic -62628 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr15-1915 chr15 80053971 80054181 + 10.5 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -5492 NM_001242918 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr22-2907 chr22 46425208 46425418 + 10.5 0.000 intron (NM_014246, intron 5 of 34) L1MD1|LINE|L1 89599 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr10-1544 chr10 94545967 94546177 + 10.5 0.000 intron (NM_001289075, intron 1 of 20) CpG 284 NM_001289075 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding chr11-5439 chr11 71409628 71409838 + 10.5 0.000 intron (NR_038862, intron 2 of 2) intron (NR_038862, intron 2 of 2) 13621 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr5-7009 chr5 154985796 154986006 + 10.5 0.000 Intergenic Intergenic -27854 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr2-4975 chr2 202339286 202339496 + 10.5 0.000 Intergenic LTR40b|LTR|ERVL -36936 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr7-2696 chr7 24515622 24515832 + 10.5 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -57725 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr2-5772 chr2 223488828 223489038 + 10.5 0.000 Intergenic Intergenic 113428 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr20-2042 chr20 2708634 2708844 + 10.5 0.000 intron (NM_001110514, intron 6 of 17) AluJo|SINE|Alu 15861 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr14-1620 chr14 102737622 102737832 + 10.5 0.000 Intergenic Intergenic -39722 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr18-242 chr18 12702788 12702998 + 10.5 0.000 promoter-TSS (NM_020232) promoter-TSS (NM_020232) -116 NM_001271989 79959 Hs.236940 NM_024899 ENSG00000101624 CEP76 C18orf9|HsT1705 centrosomal protein 76 protein-coding chr7-3213 chr7 131300834 131301044 + 10.5 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 26840 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr14-2692 chr14 79740408 79740618 + 10.5 0.000 intron (NR_073547, intron 18 of 20) intron (NR_073547, intron 18 of 20) 461133 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr3-5608 chr3 9556600 9556810 + 10.5 0.000 Intergenic AluSx1|SINE|Alu -2883 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr8-1465 chr8 19312662 19312872 + 10.5 0.000 promoter-TSS (NM_001174160) promoter-TSS (NM_001174160) -803 NM_001363110 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr3-554 chr3 136723781 136723991 + 10.5 0.000 intron (NM_005862, intron 1 of 33) SVA_D|Retroposon|SVA 28492 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr11-4315 chr11 69297344 69297554 + 10.5 0.000 TTS (NM_001293296) TTS (NM_001293296) 3294 NM_001293294 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr5-3417 chr5 149834261 149834471 + 10.5 0.000 intron (NM_001172698, intron 4 of 10) MIR|SINE|MIR 62426 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr10-2984 chr10 78460366 78460576 + 10.5 0.000 Intergenic Intergenic 193129 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr1-5731 chr1 88276171 88276381 + 10.5 0.000 Intergenic Intergenic -407868 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1-4234 chr1 192531157 192531367 + 10.5 0.000 Intergenic L2a|LINE|L2 -44511 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G protein signaling 1 protein-coding chr1-4560 chr1 78491581 78491791 + 10.5 0.000 intron (NM_001039585, intron 1 of 3) CpG 712 NM_000959 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr2-14139 chr2 203043973 203044183 + 10.5 0.000 intron (NM_001114132, intron 3 of 54) L2|LINE|L2 29199 NM_001114132 65065 Hs.648846 NM_198945 ENSG00000144426 NBEAL1 A530083I02Rik|ALS2CR16|ALS2CR17 neurobeachin like 1 protein-coding chr17-8627 chr17 81337933 81338143 + 10.5 0.000 Intergenic AluJb|SINE|Alu -28790 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr2-2925 chr2 241515516 241515726 + 10.5 0.000 Intergenic Intergenic -6049 NM_001282305 10494 Hs.516807 NM_006374 ENSG00000115694 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding chr6-1528 chr6 41655557 41655767 + 10.5 0.000 Intergenic Intergenic 17194 NM_001300806 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding chr11-3635 chr11 75850780 75850990 + 10.5 0.000 intron (NM_003369, intron 1 of 14) intron (NM_003369, intron 1 of 14) 35675 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr14-1947 chr14 26393960 26394170 + 10.5 0.000 Intergenic Intergenic 159365 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr4-3842 chr4 125003972 125004182 + 10.5 0.000 Intergenic Intergenic -291345 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr13-1265 chr13 110251498 110251708 + 10.5 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 55554 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr6-3508 chr6 26126095 26126305 + 10.5 0.000 Intergenic Intergenic 2055 NM_003512 8334 Hs.484950 NM_003512 ENSG00000180573 HIST1H2AC H2A/l|H2AFL|dJ221C16.4 histone cluster 1 H2A family member c protein-coding chr5-1814 chr5 75603111 75603321 + 10.5 0.000 non-coding (NR_144315, exon 14 of 14) non-coding (NR_144315, exon 14 of 14) -8260 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr1-16089 chr1 203232302 203232512 + 10.5 0.000 Intergenic Intergenic -2734 NR_045784 1118 Hs.201688 NM_003465 ENSG00000133063 CHIT1 CHI3|CHIT|CHITD chitinase 1 protein-coding chr1-14819 chr1 73563254 73563464 + 10.5 0.000 Intergenic L1PA7|LINE|L1 -111320 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA chr2-4203 chr2 201997847 201998057 + 10.5 0.000 Intergenic AluJb|SINE|Alu -36635 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr10-8203 chr10 72308607 72308817 + 10.5 0.000 Intergenic Intergenic 34788 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr1-10103 chr1 98144263 98144473 + 10.5 0.000 Intergenic Intergenic -66343 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr1-7277 chr1 235972528 235972738 + 10.5 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -88920 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr21-1180 chr21 42691374 42691584 + 10.5 0.000 intron (NM_001001577, intron 2 of 15) (CACCAT)n|Simple_repeat|Simple_repeat 37727 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr19-2244 chr19 48584255 48584465 + 10.5 0.000 intron (NM_177973, intron 2 of 6) LTR41C|LTR|ERVL 8624 NM_004605 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr1-7365 chr1 20245365 20245575 + 10.5 0.000 TTS (NR_147205) TTS (NR_147205) 2375 NR_147205 105376827 Hs.559701 NR_147205 ENSG00000228105 LINC01757 - long intergenic non-protein coding RNA 1757 ncRNA chr12-2145 chr12 109327663 109327873 + 10.5 0.000 Intergenic AluSq|SINE|Alu -18484 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr10-9181 chr10 130936286 130936496 + 10.5 0.000 Intergenic MIRb|SINE|MIR 26277 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr12-1763 chr12 85280506 85280716 + 10.5 0.000 intron (NM_006982, intron 1 of 3) CpG 391 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr17-2454 chr17 39755393 39755603 + 10.5 0.000 Intergenic Intergenic 15531 NM_001242443 2886 Hs.86859 NM_005310 ENSG00000141738 GRB7 - growth factor receptor bound protein 7 protein-coding chr19-2771 chr19 43174687 43174897 + 10.5 0.000 intron (NM_001130014, intron 4 of 5) intron (NM_001130014, intron 4 of 5) 11744 NM_002781 5673 Hs.654415 NM_002781 ENSG00000204941 PSG5 FL-NCA-3|PSG pregnancy specific beta-1-glycoprotein 5 protein-coding chr6-3055 chr6 67253880 67254090 + 10.5 0.000 Intergenic Intergenic -801366 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr12-2400 chr12 41785022 41785232 + 10.5 0.000 Intergenic Intergenic 20938 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr4-2975 chr4 114487013 114487223 + 10.5 0.000 Intergenic Intergenic -111284 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr6-1100 chr6 90098206 90098416 + 10.5 0.000 intron (NM_021813, intron 4 of 8) intron (NM_021813, intron 4 of 8) 198532 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr20-1201 chr20 10283170 10283380 + 10.5 0.000 intron (NM_001322907, intron 5 of 9) MIR|SINE|MIR -63769 NR_040710 100131208 Hs.658178 NR_040710 ENSG00000227906 SNAP25-AS1 - SNAP25 antisense RNA 1 ncRNA chr12-2214 chr12 47329340 47329550 + 10.5 0.000 Intergenic L1MD1|LINE|L1 -22046 NR_135024 105369747 Hs.88617 NR_135024 LOC105369747 - uncharacterized LOC105369747 ncRNA chr17-2821 chr17 16203097 16203307 + 10.5 0.000 intron (NM_006311, intron 1 of 45) L2a|LINE|L2 -8563 NM_001190440 9611 Hs.462323 NM_006311 ENSG00000141027 NCOR1 N-CoR|N-CoR1|PPP1R109|TRAC1|hN-CoR nuclear receptor corepressor 1 protein-coding chr2-6817 chr2 60516039 60516249 + 10.5 0.000 intron (NM_138559, intron 2 of 4) intron (NM_138559, intron 2 of 4) 37354 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr16-1704 chr16 4200316 4200526 + 10.5 0.000 intron (NM_001098814, intron 3 of 5) intron (NM_001098814, intron 3 of 5) 41659 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr2-4178 chr2 188181026 188181236 + 10.5 0.000 intron (NR_126396, intron 1 of 2) LTR43B|LTR|ERV1 106560 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr1-4823 chr1 22747399 22747609 + 10.5 0.000 intron (NM_004442, intron 1 of 15) intron (NM_004442, intron 1 of 15) 27987 NR_039832 100616391 NR_039832 ENSG00000265422 MIR4684 - microRNA 4684 ncRNA chr2-4485 chr2 1772939 1773149 + 10.5 0.000 Intergenic Intergenic -28529 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chrX-3671 chrX 104136619 104136829 + 10.5 0.000 intron (NM_001012755, intron 1 of 1) L2c|LINE|L2 -12092 NR_039980 286437 Hs.656786 NR_039980 LOC286437 - uncharacterized LOC286437 ncRNA chr1-6157 chr1 181033249 181033459 + 10.5 0.000 promoter-TSS (NM_001194999) promoter-TSS (NM_001194999) -71 NM_001195035 3140 Hs.13500 NM_001531 ENSG00000153029 MR1 HLALS major histocompatibility complex, class I-related protein-coding chr9-4156 chr9 4111671 4111881 + 10.5 0.000 intron (NM_001042413, intron 4 of 10) intron (NM_001042413, intron 4 of 10) 40407 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr14-4675 chr14 55999952 56000162 + 10.5 0.000 Intergenic Intergenic -118354 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr17-8119 chr17 57731492 57731702 + 10.5 0.000 Intergenic Intergenic 13702 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr2-9232 chr2 218513543 218513753 + 10.5 0.000 intron (NM_020935, intron 10 of 25) L1ME1|LINE|L1 54703 NM_020935 57695 Hs.166068 NM_020935 ENSG00000135913 USP37 - ubiquitin specific peptidase 37 protein-coding chr13-979 chr13 41012463 41012673 + 10.5 0.000 intron (NM_001370329, intron 1 of 9) AluJr|SINE|Alu 6748 NM_001370332 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr19-2937 chr19 4337098 4337308 + 10.5 0.000 intron (NM_001013841, intron 1 of 12) AluJr|SINE|Alu 1624 NM_017720 55620 Hs.194385 NM_017720 ENSG00000178078 STAP2 BKS signal transducing adaptor family member 2 protein-coding chr19-2504 chr19 10431867 10432077 + 10.5 0.000 promoter-TSS (NM_001111309) promoter-TSS (NM_001111309) -463 NM_001111309 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr4-2942 chr4 100719691 100719901 + 10.5 0.000 Intergenic L1PB1|LINE|L1 -44683 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr2-5694 chr2 205358344 205358554 + 10.5 0.000 intron (NM_205863, intron 18 of 21) L3|LINE|CR1 -324051 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr12-3956 chr12 8022532 8022742 + 10.5 0.000 Intergenic AluJb|SINE|Alu -10079 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr10-7965 chr10 57903292 57903502 + 10.5 0.000 Intergenic L1MD2|LINE|L1 364497 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr10-1499 chr10 9244037 9244247 + 10.5 0.000 intron (NR_120635, intron 4 of 4) intron (NR_120635, intron 4 of 4) -31471 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr2-8841 chr2 172977917 172978127 + 10.5 0.000 intron (NM_001282901, intron 4 of 24) intron (NM_001282901, intron 4 of 24) 49817 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr1-5980 chr1 40770592 40770802 + 10.5 0.000 exon (NM_001308114, exon 10 of 10) exon (NM_001308114, exon 10 of 10) -13090 NM_004700 9132 Hs.473058 NM_004700 ENSG00000117013 KCNQ4 DFNA2|DFNA2A|KV7.4 potassium voltage-gated channel subfamily Q member 4 protein-coding chr2-4420 chr2 128348246 128348456 + 10.5 0.000 Intergenic Intergenic -29483 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr1-6097 chr1 119674174 119674384 + 10.5 0.000 Intergenic LTR64|LTR|ERV1 -26013 NM_001080470 90874 Hs.381105 NM_001080470 ENSG00000143067 ZNF697 - zinc finger protein 697 protein-coding chr2-13064 chr2 109663590 109663800 + 10.5 0.000 Intergenic Intergenic 49331 NM_023016 65124 Hs.355455 NM_023016 ENSG00000198142 SOWAHC ANKRD57|C2orf26 sosondowah ankyrin repeat domain family member C protein-coding chr15-1630 chr15 88898956 88899166 + 10.5 0.000 3' UTR (NM_001310321, exon 8 of 8) 3' UTR (NM_001310321, exon 8 of 8) -3517 NM_178232 145864 Hs.447530 NM_178232 ENSG00000140511 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding chr7-3901 chr7 115388918 115389128 + 10.5 0.000 Intergenic Intergenic -157668 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr16-2156 chr16 55542650 55542860 + 10.5 0.000 intron (NM_017839, intron 8 of 13) intron (NM_017839, intron 8 of 13) -23929 NM_032330 84290 Hs.660027 NM_032330 ENSG00000256812 CAPNS2 CSS2 calpain small subunit 2 protein-coding chr3-3257 chr3 53159338 53159548 + 10.5 0.000 Intergenic MIRb|SINE|MIR -1766 NM_212539 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr13-1464 chr13 79780459 79780669 + 10.5 0.000 Intergenic Intergenic -23822 NR_125785 102724076 Hs.208617 NR_125785 ENSG00000229011 LINC01038 - long intergenic non-protein coding RNA 1038 ncRNA chr2-6415 chr2 138622933 138623143 + 10.5 0.000 Intergenic Intergenic 121268 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr4-3333 chr4 2036082 2036292 + 10.5 0.000 Intergenic PRIMA41-int|LTR|ERV1 -5806 NM_001168243 401115 Hs.446474 NM_001141936 ENSG00000243449 C4orf48 CHR4_55 chromosome 4 open reading frame 48 protein-coding chr2-2741 chr2 159010462 159010672 + 10.5 0.000 intron (NM_001350063, intron 2 of 24) intron (NM_001350063, intron 2 of 24) 41927 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr17-3290 chr17 48026576 48026786 + 10.5 0.000 intron (NM_016429, intron 8 of 8) intron (NM_016429, intron 8 of 8) -6201 NR_162100 113218499 NR_162100 MIR10226 - microRNA 10226 ncRNA chr5-2346 chr5 73304579 73304789 + 10.5 0.000 Intergenic MIR|SINE|MIR -33222 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chrX-1312 chrX 127486321 127486531 + 10.5 0.000 Intergenic Intergenic 565977 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr1-6594 chr1 37062892 37063102 + 10.5 0.000 Intergenic Intergenic -28482 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr4-6331 chr4 91764151 91764361 + 10.5 0.000 Intergenic THE1B|LTR|ERVL-MaLR 513046 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr2-6709 chr2 26636972 26637182 + 10.5 0.000 intron (NM_001029881, intron 2 of 6) HAL1|LINE|L1 4289 NM_001029881 130106 Hs.591579 NM_001029881 ENSG00000157884 CIB4 KIP4 calcium and integrin binding family member 4 protein-coding chr5-3441 chr5 157338748 157338958 + 10.5 0.000 intron (NM_001037333, intron 21 of 30) intron (NM_001037333, intron 21 of 30) 6824 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr2-4701 chr2 226363226 226363436 + 10.5 0.000 Intergenic Intergenic 220537 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr1-13342 chr1 246372499 246372709 + 10.5 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 44808 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr7-5188 chr7 9565531 9565741 + 10.5 0.000 Intergenic Intergenic -68634 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr19-6424 chr19 15311703 15311913 + 10.5 0.000 intron (NM_001330384, intron 1 of 11) AluSq2|SINE|Alu 20731 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr3-6264 chr3 70803129 70803339 + 10.5 0.000 Intergenic Intergenic 261690 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr15-1046 chr15 41417889 41418099 + 10.5 0.000 intron (NM_015138, intron 1 of 17) intron (NM_015138, intron 1 of 17) 890 NM_015138 23168 Hs.511096 NM_015138 ENSG00000137815 RTF1 GTL7|KIAA0252 RTF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr11-4840 chr11 16258065 16258275 + 10.5 0.000 intron (NM_033326, intron 3 of 15) L1MC1|LINE|L1 98376 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr8-1108 chr8 66679777 66679987 + 10.5 0.000 non-coding (NR_161216, exon 3 of 3) non-coding (NR_161216, exon 3 of 3) 12286 NM_001204173 100533105 NM_001204173 ENSG00000104205 C8orf44-SGK3 - C8orf44-SGK3 readthrough protein-coding chr18-765 chr18 11851779 11851989 + 10.5 0.000 exon (NM_020412, exon 1 of 1) exon (NM_020412, exon 1 of 1) 471 NM_020412 57132 Hs.656244 NM_020412 ENSG00000255112 CHMP1B C10orf2|C18-ORF2|C18orf2|CHMP1.5|Vps46-2|Vps46B|hVps46-2 charged multivesicular body protein 1B protein-coding chr5-2768 chr5 160504989 160505199 + 10.5 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 19742 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr6-5286 chr6 139743725 139743935 + 10.5 0.000 Intergenic Intergenic -27243 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr10-1478 chr10 124340186 124340396 + 10.5 0.000 Intergenic Intergenic 78632 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr5-3351 chr5 136781485 136781695 + 10.5 0.000 Intergenic MER112|DNA|hAT-Charlie -346607 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr3-5530 chr3 573845 574055 + 10.5 0.000 Intergenic Intergenic -18155 NR_110118 101927215 Hs.650700 NR_110118 ENSG00000224957 LINC01266 - long intergenic non-protein coding RNA 1266 ncRNA chr4-6556 chr4 183068486 183068696 + 10.5 0.000 Intergenic L1MEd|LINE|L1 30608 NR_024008 152641 Hs.745108 NM_153008 ENSG00000251359 WWC2-AS2 C4orf38 WWC2 antisense RNA 2 ncRNA chr14-1120 chr14 81000767 81000977 + 10.5 0.000 intron (NM_001142626, intron 1 of 8) intron (NM_001142626, intron 1 of 8) 45251 NM_001142626 7253 Hs.160411 NM_000369 ENSG00000165409 TSHR CHNG1|LGR3|hTSHR-I thyroid stimulating hormone receptor protein-coding chr10-5498 chr10 80698571 80698781 + 10.5 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 48879 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr3-6835 chr3 148450989 148451199 + 10.5 0.000 Intergenic MSTB|LTR|ERVL-MaLR 170203 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr16-1669 chr16 75029949 75030159 + 10.5 0.000 intron (NM_032268, intron 1 of 4) AluSz|SINE|Alu 31030 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr10-8002 chr10 61096933 61097143 + 10.5 0.000 Intergenic Intergenic 80763 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr22-923 chr22 37497259 37497469 + 10.5 0.000 intron (NM_014550, intron 11 of 19) L2b|LINE|L2 -10977 NM_001166343 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr7-4533 chr7 1929278 1929488 + 10.5 0.000 intron (NM_001013837, intron 17 of 18) intron (NM_001013837, intron 17 of 18) 11188 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr11-8866 chr11 13760319 13760529 + 10.5 0.000 Intergenic Intergenic -23962 NR_149108 105376562 Hs.577257 NR_149108 ENSG00000255411 LINC02548 - long intergenic non-protein coding RNA 2548 ncRNA chr5-3520 chr5 455057 455267 + 10.5 0.000 intron (NM_007277, intron 4 of 12) intron (NM_007277, intron 4 of 12) 11986 NM_007277 11336 Hs.481464 NM_007277 ENSG00000180104 EXOC3 SEC6|SEC6L1|Sec6p exocyst complex component 3 protein-coding chr16-5775 chr16 87965052 87965262 + 10.5 0.000 intron (NM_001173542, intron 1 of 12) L2a|LINE|L2 -4861 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr20-1965 chr20 35334202 35334412 + 10.5 0.000 intron (NM_001184977, intron 5 of 7) intron (NM_001184977, intron 5 of 7) -41882 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr2-4905 chr2 143530881 143531091 + 10.5 0.000 intron (NM_018460, intron 10 of 13) intron (NM_018460, intron 10 of 13) 401567 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr11-8331 chr11 76711483 76711693 + 10.5 0.000 intron (NR_024042, intron 8 of 20) LTR5A|LTR|ERVK 10201 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr5-3125 chr5 55978178 55978388 + 10.5 0.000 intron (NR_157112, intron 2 of 17) LTR40a|LTR|ERVL 16680 NR_120480 3572 Hs.532082 NM_002184 ENSG00000134352 IL6ST CD130|CDW130|GP130|IL-6RB interleukin 6 signal transducer protein-coding chr1-3906 chr1 68323365 68323575 + 10.5 0.000 Intergenic Intergenic -90924 NM_001193334 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chrX-3127 chrX 9913196 9913406 + 10.5 0.000 intron (NM_001320663, intron 1 of 5) intron (NM_001320663, intron 1 of 5) 809 NM_001320663 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr5-8805 chr5 149686082 149686292 + 10.5 0.000 Intergenic Intergenic -44123 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr3-8776 chr3 4355525 4355735 + 10.5 0.000 Intergenic Intergenic 52326 NM_001320676 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr11-3897 chr11 111162279 111162489 + 10.5 0.000 Intergenic Intergenic -65066 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr6-4551 chr6 40997314 40997524 + 10.5 0.000 intron (NR_110873, intron 1 of 5) intron (NR_110873, intron 1 of 5) 25861 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr1-7047 chr1 178749995 178750205 + 10.5 0.000 intron (NM_152663, intron 1 of 19) AluJb|SINE|Alu 24856 NM_152663 55103 Hs.632485 NM_018037 ENSG00000116191 RALGPS2 dJ595C2.1 Ral GEF with PH domain and SH3 binding motif 2 protein-coding chr11-7869 chr11 120673326 120673536 + 10.5 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 108995 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr11-1276 chr11 63671475 63671685 + 10.5 0.000 promoter-TSS (NM_015459) promoter-TSS (NM_015459) -204 NM_015459 25923 Hs.356719 NM_015459 ENSG00000184743 ATL3 HSN1F atlastin GTPase 3 protein-coding chrX-905 chrX 112312665 112312875 + 10.5 0.000 intron (NM_001004308, intron 2 of 2) intron (NM_001004308, intron 2 of 2) 229745 NM_001004308 340595 Hs.368140 NM_001004308 ENSG00000187823 RTL4 Mar4|Mart4|SIRH11|ZCCHC16 retrotransposon Gag like 4 protein-coding chr14-3629 chr14 64844607 64844817 + 10.5 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) -21332 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr9-5829 chr9 129787570 129787780 + 10.5 0.000 Intergenic Intergenic -15468 NR_133948 27348 Hs.252682 NM_014506 ENSG00000136816 TOR1B DQ1 torsin family 1 member B protein-coding chr6-3018 chr6 48560519 48560729 + 10.5 0.000 Intergenic L2a|LINE|L2 -491935 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr6-2844 chr6 1311662 1311872 + 10.5 0.000 promoter-TSS (NM_033260) promoter-TSS (NM_033260) -331 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr19-2238 chr19 46813373 46813583 + 10.5 0.000 Intergenic Intergenic 17226 NR_024258 100170220 Hs.541243 NR_024258 SNAR-E - small NF90 (ILF3) associated RNA E snRNA chr13-2603 chr13 74696822 74697032 + 10.5 0.000 Intergenic Intergenic 144084 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr17-2961 chr17 63083115 63083325 + 10.5 0.000 intron (NM_025185, intron 3 of 25) L1MD2|LINE|L1 116985 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr2-13207 chr2 122063875 122064085 + 10.5 0.000 Intergenic MIR3|SINE|MIR 308329 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr9-4250 chr9 92648033 92648243 + 10.5 0.000 exon (NM_022755, exon 6 of 13) exon (NM_022755, exon 6 of 13) 21993 NM_022755 64768 Hs.459896 NM_022755 ENSG00000127080 IPPK C9orf12|INSP5K2|IP5K|IPK1|bA476B13.1 inositol-pentakisphosphate 2-kinase protein-coding chr18-1626 chr18 49666331 49666541 + 10.5 0.000 Intergenic Intergenic 104379 NM_001308006 9388 Hs.465102 NM_006033 ENSG00000101670 LIPG EDL|EL|PRO719 lipase G, endothelial type protein-coding chr5-2601 chr5 126515883 126516093 + 10.5 0.000 Intergenic Intergenic 50838 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr8-6773 chr8 93127718 93127928 + 10.5 0.000 Intergenic Intergenic 39027 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr11-3428 chr11 57131025 57131235 + 10.5 0.000 Intergenic Intergenic -50823 NM_001005210 219527 Hs.199853 NM_001005210 ENSG00000183908 LRRC55 - leucine rich repeat containing 55 protein-coding chr2-5395 chr2 105410384 105410594 + 10.5 0.000 intron (NM_201557, intron 1 of 5) intron (NM_201557, intron 1 of 5) -10822 NM_001318894 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr2-5417 chr2 112606028 112606238 + 10.5 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 21279 NM_001304354 84269 Hs.375707 NM_032309 ENSG00000125611 CHCHD5 C2orf9|CHTM1|MIC14|MIX14 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding chr9-6853 chr9 75267616 75267826 + 10.5 0.000 Intergenic Intergenic 179207 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr4-5957 chr4 164941287 164941497 + 10.5 0.000 Intergenic L1PA8|LINE|L1 -15556 NR_160935 152756 Hs.178648 NM_153027 ENSG00000250486 FAM218A C4orf39 family with sequence similarity 218 member A ncRNA chr3-4780 chr3 116515943 116516153 + 10.5 0.000 Intergenic MIRb|SINE|MIR -36425 NR_046624 100861506 Hs.641878 NR_046624 LINC00903 LSAMP-AS2 long intergenic non-protein coding RNA 903 ncRNA chr18-1005 chr18 41875625 41875835 + 10.5 0.000 Intergenic THE1B|LTR|ERVL-MaLR -79504 NM_001308020 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr3-2511 chr3 5305409 5305619 + 10.5 0.000 Intergenic Intergenic -55259 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr2-4554 chr2 53490742 53490952 + 10.5 0.000 Intergenic LTR18A|LTR|ERVL -276936 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr18-692 chr18 12271680 12271890 + 10.5 0.000 intron (NM_001279, intron 3 of 4) CpG 17424 NM_001318383 1149 Hs.249129 NM_001279 ENSG00000176194 CIDEA CIDE-A cell death inducing DFFA like effector a protein-coding chr2-13790 chr2 172864337 172864547 + 10.5 0.000 intron (NM_001282899, intron 1 of 27) intron (NM_001282899, intron 1 of 27) 4404 NM_001282900 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr14-2368 chr14 32902145 32902355 + 10.5 0.000 Intergenic Intergenic -36629 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr11-10692 chr11 129295336 129295546 + 10.5 0.000 Intergenic Intergenic -12277 NR_145484 399975 NM_207431 LOC399975 - uncharacterized LOC399975 ncRNA chr5-6729 chr5 74076755 74076965 + 10.5 0.000 Intergenic LTR16D|LTR|ERVL 231465 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr3-4708 chr3 56275607 56275817 + 10.5 0.000 intron (NR_132749, intron 3 of 17) MER5A1|DNA|hAT-Charlie 192755 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr7-4171 chr7 108234490 108234700 + 10.5 0.000 exon (NM_001371155, exon 8 of 32) exon (NM_001371155, exon 8 of 32) 8790 NM_001371182 chr3-3616 chr3 98577266 98577476 + 10.5 0.000 Intergenic Intergenic 16240 NM_000097 1371 Hs.476982 NM_000097 ENSG00000080819 CPOX COX|CPO|CPX|HCP coproporphyrinogen oxidase protein-coding chr4-3262 chr4 96237626 96237836 + 10.5 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -72972 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr2-4461 chr2 222276889 222277099 + 10.5 0.000 intron (NM_181457, intron 4 of 7) intron (NM_181457, intron 4 of 7) -21153 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr19-5810 chr19 38451160 38451370 + 10.5 0.000 intron (NM_001042723, intron 11 of 104) L2b|LINE|L2 17565 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr11-1993 chr11 43852074 43852284 + 10.5 0.000 intron (NM_016142, intron 9 of 10) intron (NM_016142, intron 9 of 10) -28652 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr1-5504 chr1 164401099 164401309 + 10.5 0.000 Intergenic L1MB7|LINE|L1 -158156 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr5-3877 chr5 142541172 142541382 + 10.5 0.000 Intergenic Intergenic 80057 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr5-4507 chr5 11538290 11538500 + 10.5 0.000 intron (NM_001288715, intron 2 of 20) intron (NM_001288715, intron 2 of 20) 50522 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr3-3733 chr3 189071579 189071789 + 10.5 0.000 Intergenic Intergenic -100287 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr5-3734 chr5 33679763 33679973 + 10.5 0.000 intron (NM_001324512, intron 5 of 21) intron (NM_001324512, intron 5 of 21) 212122 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chr10-5013 chr10 33010449 33010659 + 10.5 0.000 Intergenic Intergenic -52324 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr6-3657 chr6 142496839 142497049 + 10.5 0.000 Intergenic Intergenic 140892 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr13-1427 chr13 42877531 42877741 + 10.5 0.000 Intergenic MER67C|LTR|ERV1 -4892 NR_126388 104355147 Hs.633967 NR_126388 LINC00428 - long intergenic non-protein coding RNA 428 ncRNA chr6-2022 chr6 43260354 43260564 + 10.5 0.000 intron (NM_032538, intron 12 of 14) intron (NM_032538, intron 12 of 14) 16978 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr5-3115 chr5 53877261 53877471 + 10.5 0.000 Intergenic MIRb|SINE|MIR -57684 NR_147167 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr4-7363 chr4 59438143 59438353 + 10.5 0.000 Intergenic Intergenic 424675 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr5-2068 chr5 139138575 139138785 + 10.5 0.000 intron (NM_022464, intron 1 of 9) MIRb|SINE|MIR 59688 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr13-1600 chr13 44068816 44069026 + 10.5 0.000 Intergenic Intergenic -41628 NR_104065 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr13-3716 chr13 39128940 39129150 + 10.5 0.000 Intergenic Intergenic 90589 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr18-1395 chr18 60156212 60156422 + 10.5 0.000 Intergenic L1MA6|LINE|L1 216458 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr17-6838 chr17 17156409 17156619 + 10.5 0.000 intron (NM_201274, intron 13 of 23) intron (NM_201274, intron 13 of 23) 49819 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr17-926 chr17 58083855 58084065 + 10.5 0.000 promoter-TSS (NR_110809) promoter-TSS (NR_110809) 541 NM_080677 140735 Hs.720595 NM_080677 ENSG00000264364 DYNLL2 DNCL1B|Dlc2|RSPH22 dynein light chain LC8-type 2 protein-coding chr5-3335 chr5 133527281 133527491 + 10.5 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) 85155 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr2-6794 chr2 50073709 50073919 + 10.5 0.000 intron (NM_001330093, intron 19 of 22) intron (NM_001330093, intron 19 of 22) -99611 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr5-2668 chr5 31412417 31412627 + 10.5 0.000 intron (NM_013235, intron 29 of 34) intron (NM_013235, intron 29 of 34) 119571 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr4-2967 chr4 111903069 111903279 + 10.5 0.000 Intergenic MIRb|SINE|MIR -242280 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr9-6159 chr9 72577354 72577564 + 10.5 0.000 intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 55658 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr1-6585 chr1 36087102 36087312 + 10.5 0.000 exon (NM_014466, exon 7 of 10) exon (NM_014466, exon 7 of 10) -1685 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr3-6163 chr3 58124302 58124512 + 10.5 0.000 exon (NM_001164317, exon 22 of 47) exon (NM_001164317, exon 22 of 47) 46228 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr3-3316 chr3 183476462 183476672 + 10.5 0.000 Intergenic Intergenic 22753 NR_145763 109617007 NR_145763 ENSG00000199363 SNORA63E - small nucleolar RNA, H/ACA box 63E snoRNA chr14-2734 chr14 98577355 98577565 + 10.5 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -134153 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr2-5497 chr2 142834005 142834215 + 10.5 0.000 Intergenic L1ME2|LINE|L1 -43554 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr12-2458 chr12 56119446 56119656 + 10.5 0.000 intron (NM_001303125, intron 2 of 2) intron (NM_001303125, intron 2 of 2) 1134 NM_001303125 84872 Hs.632706 NM_032786 ENSG00000135482 ZC3H10 ZC3HDC10 zinc finger CCCH-type containing 10 protein-coding chr4-5514 chr4 92305560 92305770 + 10.5 0.000 intron (NM_001286838, intron 1 of 14) CpG 1266 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr20-1165 chr20 63046369 63046579 + 10.5 0.000 intron (NR_033369, intron 1 of 5) intron (NR_033369, intron 1 of 5) 8463 NR_033369 100144597 Hs.636485 NR_033369 ENSG00000237119 LINC01056 - long intergenic non-protein coding RNA 1056 ncRNA chr10-4666 chr10 127238546 127238756 + 10.5 0.000 intron (NM_001290223, intron 27 of 51) L1MC4|LINE|L1 -42060 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr7-2638 chr7 2033086 2033296 + 10.5 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 55861 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr14-3607 chr14 51783949 51784159 + 10.5 0.000 Intergenic Intergenic 66771 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr19-3624 chr19 296158 296368 + 10.5 0.000 Intergenic Intergenic -4860 NM_177526 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr3-7219 chr3 193341334 193341544 + 10.5 0.000 intron (NM_198505, intron 9 of 29) intron (NM_198505, intron 9 of 29) 34195 NR_046758 100874218 Hs.407490 NR_046758 ATP13A5-AS1 - ATP13A5 antisense RNA 1 ncRNA chr11-2886 chr11 44834309 44834519 + 10.5 0.000 intron (NM_130783, intron 2 of 9) intron (NM_130783, intron 2 of 9) 107452 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr11-8377 chr11 87729951 87730161 + 10.5 0.000 Intergenic L1MDa|LINE|L1 -10645 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr9-5891 chr9 132122648 132122858 + 10.5 0.000 Intergenic Intergenic -39305 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr15-3169 chr15 68705629 68705839 + 10.5 0.000 intron (NM_006091, intron 3 of 11) intron (NM_006091, intron 3 of 11) 64231 NM_001324015 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr10-7956 chr10 55340234 55340444 + 10.5 0.000 intron (NM_001354404, intron 2 of 34) intron (NM_001354404, intron 2 of 34) -258703 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding chr1-6490 chr1 22288937 22289147 + 10.5 0.000 Intergenic MIRb|SINE|MIR 22803 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chrX-1357 chrX 146761286 146761496 + 10.5 0.000 Intergenic L1M3a|LINE|L1 -48380 NM_001244892 100133053 NM_001244892 ENSG00000235699 CXorf51B CXorf51A chromosome X open reading frame 51B protein-coding chr1-6472 chr1 20688990 20689200 + 10.5 0.000 intron (NM_001122819, intron 7 of 14) MIRb|SINE|MIR -27551 NM_005216 1650 Hs.523145 NM_005216 ENSG00000244038 DDOST AGER1|CDG1R|GATD6|OKSWcl45|OST|OST48|WBP1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit protein-coding chr17-3466 chr17 42096154 42096364 + 10.5 0.000 Intergenic MER115|DNA|hAT-Tip100 16455 NM_024119 79132 Hs.55918 NM_024119 ENSG00000108771 DHX58 D11LGP2|D11lgp2e|LGP2|RLR-3 DExH-box helicase 58 protein-coding chr11-4929 chr11 65235081 65235291 + 10.5 0.000 intron (NR_033396, intron 7 of 9) AluJb|SINE|Alu 21346 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr2-3571 chr2 41467218 41467428 + 10.5 0.000 Intergenic Intergenic -410232 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr11-7069 chr11 120905916 120906126 + 10.5 0.000 intron (NM_001282470, intron 12 of 19) intron (NM_001282470, intron 12 of 19) -11224 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr8-2333 chr8 16262552 16262762 + 10.5 0.000 Intergenic Intergenic -69866 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr11-6004 chr11 22205235 22205445 + 10.5 0.000 intron (NM_001142649, intron 2 of 21) L1PA13|LINE|L1 12164 NM_213599 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr16-5808 chr16 178019 178229 + 10.5 0.000 TTS (NM_000558) TTS (NM_000558) 1444 NM_000558 3039 Hs.449630 NM_000558 ENSG00000206172 HBA1 ECYT7|HBA-T3|HBH|METHBA hemoglobin subunit alpha 1 protein-coding chr14-2410 chr14 60721220 60721430 + 10.5 0.000 intron (NM_017420, intron 1 of 2) intron (NM_017420, intron 1 of 2) 3026 NM_017420 51804 Hs.97849 NM_017420 ENSG00000100625 SIX4 AREC3 SIX homeobox 4 protein-coding chr6-2778 chr6 134707180 134707390 + 10.5 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -167280 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr3-5879 chr3 36941465 36941675 + 10.5 0.000 intron (NM_001329998, intron 1 of 23) intron (NM_001329998, intron 1 of 23) 3484 NM_001329998 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding chr4-2614 chr4 139950745 139950955 + 10.5 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -177165 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr10-7811 chr10 42753259 42753469 + 10.5 0.000 non-coding (NR_136644, exon 1 of 1) non-coding (NR_136644, exon 1 of 1) -1778 NR_134498 105378269 Hs.448616 NR_134498 LOC105378269 - uncharacterized LOC105378269 ncRNA chr6-4934 chr6 100054953 100055163 + 10.5 0.000 intron (NR_038384, intron 2 of 2) L1MA8|LINE|L1 -60820 NM_032503 84539 Hs.591342 NM_032503 ENSG00000152034 MCHR2 GPR145|GPRv17|MCH-2R|MCH-R2|MCH2|MCH2R|MCHR-2|SLT melanin concentrating hormone receptor 2 protein-coding chr9-4240 chr9 84449028 84449238 + 10.5 0.000 Intergenic MER21C|LTR|ERVL -80406 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr14-1396 chr14 52951619 52951829 + 10.5 0.000 promoter-TSS (NM_001135000) promoter-TSS (NM_001135000) -627 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr10-6565 chr10 76229130 76229340 + 10.5 0.000 intron (NM_001305581, intron 5 of 6) LTR48|LTR|ERV1 446474 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr15-2123 chr15 71469528 71469738 + 10.5 0.000 intron (NM_024817, intron 6 of 16) intron (NM_024817, intron 6 of 16) -77603 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr5-4378 chr5 174193780 174193990 + 10.5 0.000 Intergenic MIRb|SINE|MIR -142469 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr2-4077 chr2 129323523 129323733 + 10.5 0.000 Intergenic MLT2B2|LTR|ERVL -49737 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr21-1588 chr21 15774745 15774955 + 10.5 0.000 intron (NM_001352561, intron 3 of 23) Charlie1a|DNA|hAT-Charlie 44868 NM_001283042 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr6-2434 chr6 161215241 161215451 + 10.5 0.000 intron (NM_020133, intron 2 of 8) intron (NM_020133, intron 2 of 8) -53364 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr9-5500 chr9 104378334 104378544 + 10.5 0.000 Intergenic Intergenic 108210 NR_135141 105376194 Hs.553289 NR_135141 LOC105376194 - uncharacterized LOC105376194 ncRNA chr17-5197 chr17 14341263 14341473 + 10.5 0.000 intron (NR_130138, intron 1 of 2) intron (NR_130138, intron 1 of 2) 37628 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr17-5066 chr17 3575654 3575864 + 10.5 0.000 intron (NM_018727, intron 12 of 15) L1MC4|LINE|L1 17118 NM_080706 7442 Hs.579217 NM_018727 ENSG00000196689 TRPV1 VR1 transient receptor potential cation channel subfamily V member 1 protein-coding chr3-7279 chr3 197798954 197799164 + 10.5 0.000 intron (NM_001365717, intron 1 of 19) intron (NM_001365717, intron 1 of 19) 7805 NM_001365715 84859 Hs.518414 NM_032773 ENSG00000186001 LRCH3 - leucine rich repeats and calponin homology domain containing 3 protein-coding chr6-3285 chr6 157070377 157070587 + 10.5 0.000 intron (NM_001363725, intron 2 of 17) intron (NM_001363725, intron 2 of 17) 34055 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr11-8038 chr11 19846431 19846641 + 10.5 0.000 intron (NM_182964, intron 3 of 37) intron (NM_182964, intron 3 of 37) -86453 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr4-4993 chr4 136558658 136558868 + 10.5 0.000 Intergenic MIRb|SINE|MIR -634993 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr5-2927 chr5 138721866 138722076 + 10.5 0.000 Intergenic L2a|LINE|L2 31338 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr20-1096 chr20 63540189 63540399 + 10.5 0.000 3' UTR (NM_080823, exon 8 of 8) 3' UTR (NM_080823, exon 8 of 8) -2918 NM_005975 5753 Hs.51133 NM_005975 ENSG00000101213 PTK6 BRK protein tyrosine kinase 6 protein-coding chr7-4431 chr7 111298073 111298283 + 10.5 0.000 intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) 207051 NM_018334 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr2-6509 chr2 190378585 190378795 + 10.5 0.000 Intergenic Intergenic -29665 NM_017694 54842 Hs.418581 NM_017694 ENSG00000151690 MFSD6 MMR2|hMMR2 major facilitator superfamily domain containing 6 protein-coding chr11-2305 chr11 64612931 64613141 + 10.5 0.000 intron (NM_015080, intron 22 of 22) MER91A|DNA|hAT-Tip100 21816 NM_001276326 116085 Hs.174424 NM_144585 ENSG00000197891 SLC22A12 OAT4L|RST|URAT1 solute carrier family 22 member 12 protein-coding chr2-3360 chr2 237171436 237171646 + 10.5 0.000 Intergenic Charlie25|DNA|hAT-Charlie 85652 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr13-315 chr13 49585366 49585576 + 10.5 0.000 promoter-TSS (NM_001352505) promoter-TSS (NM_001352505) 87 NM_001352500 55213 Hs.508021 NM_018191 ENSG00000136144 RCBTB1 CLLD7|CLLL7|GLP|RDEOA RCC1 and BTB domain containing protein 1 protein-coding chr2-8827 chr2 170842961 170843171 + 10.5 0.000 TTS (NM_013445) TTS (NM_013445) 26179 NM_000817 2571 Hs.420036 NM_000817 ENSG00000128683 GAD1 CPSQ1|GAD|SCP glutamate decarboxylase 1 protein-coding chr6-2859 chr6 3261527 3261737 + 10.5 0.000 intron (NM_001135750, intron 1 of 1) intron (NM_001135750, intron 1 of 1) 2685 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr11-5019 chr11 77636981 77637191 + 10.5 0.000 intron (NM_001293, intron 1 of 6) intron (NM_001293, intron 1 of 6) 708 NM_001311200 1207 Hs.430733 NM_001293 ENSG00000074201 CLNS1A CLCI|CLNS1B|ICln chloride nucleotide-sensitive channel 1A protein-coding chr19-6922 chr19 46193220 46193430 + 10.5 0.000 intron (NR_135234, intron 2 of 2) Tigger7|DNA|TcMar-Tigger 9737 NR_135234 645553 Hs.613068 NR_135234 IGFL2-AS1 - IGFL2 antisense RNA 1 ncRNA chr19-1679 chr19 3819175 3819385 + 10.5 0.000 intron (NM_015174, intron 11 of 18) intron (NM_015174, intron 11 of 18) -17481 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr8-1823 chr8 126571722 126571932 + 10.5 0.000 Intergenic Intergenic -13349 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr10-6556 chr10 73415133 73415343 + 10.5 0.000 Intergenic L2a|LINE|L2 -1180 NM_001320879 310 Hs.631827 NM_001156 ENSG00000138279 ANXA7 ANX7|SNX|SYNEXIN annexin A7 protein-coding chr20-508 chr20 49510823 49511033 + 10.5 0.000 intron (NM_000961, intron 9 of 9) intron (NM_000961, intron 9 of 9) -28260 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr2-5133 chr2 25231374 25231584 + 10.5 0.000 non-coding (NR_135490, exon 24 of 24) non-coding (NR_135490, exon 24 of 24) 20652 NM_001320893 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr16-4445 chr16 53785164 53785374 + 10.5 0.000 intron (NM_001363897, intron 1 of 7) L2a|LINE|L2 81113 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr10-3354 chr10 14823113 14823323 + 10.5 0.000 intron (NM_001029954, intron 3 of 3) intron (NM_001029954, intron 3 of 3) 14819 NM_001029954 441549 Hs.559067 NM_001029954 ENSG00000185267 CDNF ARMETL1 cerebral dopamine neurotrophic factor protein-coding chr4-2337 chr4 169570361 169570571 + 10.5 0.000 intron (NM_001199400, intron 11 of 32) SVA_D|Retroposon|SVA 42117 NM_001199398 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr2-7208 chr2 217445826 217446036 + 10.5 0.000 intron (NR_026597, intron 3 of 12) intron (NR_026597, intron 3 of 12) 163198 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chrX-739 chrX 9696813 9697023 + 10.5 0.000 intron (NM_001139466, intron 11 of 17) MER85|DNA|PiggyBac 68929 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr20-1963 chr20 34965611 34965821 + 10.5 0.000 intron (NM_020884, intron 2 of 44) L2c|LINE|L2 -9689 NM_001322494 2937 Hs.82327 NM_000178 ENSG00000100983 GSS GSHS|HEL-S-64p|HEL-S-88n glutathione synthetase protein-coding chr1-6807 chr1 89847284 89847494 + 10.5 0.000 intron (NM_001134479, intron 2 of 2) intron (NM_001134479, intron 2 of 2) 25450 NM_018103 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 VRAC subunit D protein-coding chr8-2629 chr8 66440825 66441035 + 10.5 0.000 intron (NM_144650, intron 2 of 13) intron (NM_144650, intron 2 of 13) 8426 NM_144650 137872 Hs.720023 NM_144650 ENSG00000147576 ADHFE1 ADH8|HMFT2263|HOT alcohol dehydrogenase iron containing 1 protein-coding chr14-2241 chr14 105108174 105108384 + 10.5 0.000 Intergenic L1MC4|LINE|L1 14132 NR_110546 102723354 Hs.569410 NR_110546 LINC02298 - long intergenic non-protein coding RNA 2298 ncRNA chr12-3508 chr12 124949013 124949223 + 10.5 0.000 intron (NM_032656, intron 25 of 26) intron (NM_032656, intron 25 of 26) 33571 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr15-630 chr15 67510929 67511139 + 10.5 0.000 intron (NR_040051, intron 2 of 5) intron (NR_040051, intron 2 of 5) 9939 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr9-8516 chr9 125649485 125649695 + 10.5 0.000 intron (NM_001006619, intron 4 of 10) intron (NM_001006619, intron 4 of 10) 57618 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chrX-2525 chrX 97253752 97253962 + 10.5 0.000 intron (NM_007309, intron 23 of 26) MER31B|LTR|ERV1 310678 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr6-3118 chr6 100726723 100726933 + 10.5 0.000 intron (NM_006828, intron 10 of 41) intron (NM_006828, intron 10 of 41) 154501 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr8-7043 chr8 113282194 113282404 + 10.5 0.000 intron (NM_001363185, intron 2 of 66) L1PB1|LINE|L1 94853 NM_198124 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr3-10200 chr3 120435767 120435977 + 10.5 0.000 intron (NM_007085, intron 2 of 10) AmnSINE1|SINE|5S-Deu-L2 15120 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr3-9306 chr3 43505409 43505619 + 10.5 0.000 intron (NM_001346464, intron 12 of 13) intron (NM_001346464, intron 12 of 13) 116412 NM_001346466 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr15-4986 chr15 80061770 80061980 + 10.5 0.000 intron (NM_001242914, intron 1 of 6) intron (NM_001242914, intron 1 of 6) 1715 NM_001242914 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr9-4540 chr9 78675914 78676124 + 10.5 0.000 Intergenic LTR16D|LTR|ERVL 378894 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr6-8179 chr6 132813329 132813539 + 10.5 0.000 Intergenic Intergenic -1135 NM_001016 6206 Hs.546289 NM_001016 ENSG00000112306 RPS12 S12 ribosomal protein S12 protein-coding chr12-1398 chr12 122975208 122975418 + 10.5 0.000 exon (NM_001304833, exon 1 of 7) exon (NM_001304833, exon 1 of 7) 110 NM_001304833 79676 Hs.524817 NM_024623 ENSG00000111325 OGFOD2 - 2-oxoglutarate and iron dependent oxygenase domain containing 2 protein-coding chr7-3918 chr7 127632389 127632599 + 10.5 0.000 Intergenic LTR42|LTR|ERVL -14352 NM_001366110 5078 Hs.129706 NM_006193 ENSG00000106331 PAX4 KPD|MODY9 paired box 4 protein-coding chr7-2986 chr7 11297791 11298001 + 10.5 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 324024 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr17-2235 chr17 4796777 4796987 + 10.5 0.000 intron (NM_002798, intron 2 of 5) intron (NM_002798, intron 2 of 5) 718 NM_002798 5694 Hs.77060 NM_002798 ENSG00000142507 PSMB6 DELTA|LMPY|Y proteasome subunit beta 6 protein-coding chr9-4479 chr9 34476234 34476444 + 10.5 0.000 intron (NM_001281428, intron 1 of 19) intron (NM_001281428, intron 1 of 19) 17534 NM_012144 27019 Hs.112667 NM_012144 ENSG00000122735 DNAI1 CILD1|DIC1|ICS1|PCD dynein axonemal intermediate chain 1 protein-coding chr22-3996 chr22 39345922 39346132 + 10.5 0.000 Intergenic AluSc8|SINE|Alu -3922 NM_145731 9145 Hs.216226 NM_004711 ENSG00000100321 SYNGR1 - synaptogyrin 1 protein-coding chr3-2410 chr3 193991026 193991236 + 10.5 0.000 intron (NR_033944, intron 1 of 2) FAM|SINE|Alu 3107 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo chr3-4416 chr3 7205558 7205768 + 10.5 0.000 intron (NM_000844, intron 2 of 9) MARNA|DNA|TcMar-Mariner -311646 NR_131906 105376946 Hs.616038 NR_131906 ENSG00000237665 GRM7-AS2 - GRM7 antisense RNA 2 ncRNA chr7-2960 chr7 157286873 157287083 + 10.5 0.000 Intergenic Intergenic -50026 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr12-2217 chr12 48638991 48639201 + 10.5 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 15422 NR_002968 677815 Hs.689717 NR_002968 ENSG00000221491 SNORA2C ACA34|MIR1291|SNORA34 small nucleolar RNA, H/ACA box 2C snoRNA chr17-3145 chr17 45293864 45294074 + 10.5 0.000 intron (NM_003954, intron 1 of 15) intron (NM_003954, intron 1 of 15) 23051 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding chr1-7147 chr1 205066294 205066504 + 10.5 0.000 intron (NM_001346083, intron 14 of 22) intron (NM_001346083, intron 14 of 22) 18061 NM_203376 388730 Hs.146928 NM_203376 ENSG00000174529 TMEM81 HC3107|KVLA2788|UNQ2788 transmembrane protein 81 protein-coding chr22-1830 chr22 37075331 37075541 + 10.5 0.000 intron (NM_153609, intron 10 of 17) L2|LINE|L2 23700 NM_001282684 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr1-4665 chr1 206457524 206457734 + 10.5 0.000 intron (NM_015326, intron 20 of 21) intron (NM_015326, intron 20 of 21) -12847 NM_001193322 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of nuclear factor kappa B kinase subunit epsilon protein-coding chr20-1698 chr20 36260360 36260570 + 10.5 0.000 Intergenic Intergenic 23987 NM_001271874 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr2-9056 chr2 200715831 200716041 + 10.5 0.000 intron (NR_037886, intron 2 of 2) L1ME4a|LINE|L1 19241 NR_037886 100507140 Hs.382116 NR_037886 ENSG00000237166 LINC01792 - long intergenic non-protein coding RNA 1792 ncRNA chr2-8779 chr2 165635069 165635279 + 10.5 0.000 intron (NM_024969, intron 2 of 4) intron (NM_024969, intron 2 of 4) 62838 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr4-7998 chr4 115852035 115852245 + 10.5 0.000 Intergenic L1PA14|LINE|L1 -447585 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr13-922 chr13 67119659 67119869 + 10.5 0.000 intron (NM_001318372, intron 2 of 4) intron (NM_001318372, intron 2 of 4) 110572 NM_001318372 5101 Hs.654709 NM_020403 ENSG00000184226 PCDH9 - protocadherin 9 protein-coding chr4-2720 chr4 4403212 4403422 + 10.5 0.000 intron (NM_014392, intron 3 of 4) MLT1D|LTR|ERVL-MaLR 16354 NM_014392 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr3-967 chr3 100260676 100260886 + 10.5 0.000 promoter-TSS (NM_018309) promoter-TSS (NM_018309) -211 NM_018309 55773 Hs.477003 NM_018309 ENSG00000036054 TBC1D23 NS4ATP1|PCH11 TBC1 domain family member 23 protein-coding chrX-1474 chrX 119768533 119768743 + 10.5 0.000 Intergenic AluSz|SINE|Alu 10050 NM_001105576 347454 Hs.355223 NM_001105576 ENSG00000187808 SOWAHD ANKRD58 sosondowah ankyrin repeat domain family member D protein-coding chr3-4848 chr3 155416844 155417054 + 10.5 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -68854 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr4-4227 chr4 16437843 16438053 + 10.5 0.000 Intergenic LTR26|LTR|ERV1 211285 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr4-6476 chr4 150178334 150178544 + 10.5 0.000 intron (NM_001040260, intron 2 of 15) intron (NM_001040260, intron 2 of 15) 99994 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr1-4688 chr1 228288908 228289118 + 10.5 0.000 intron (NM_052843, intron 38 of 80) intron (NM_052843, intron 38 of 80) -75349 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr10-4408 chr10 60282901 60283111 + 10.5 0.000 intron (NM_001204403, intron 2 of 43) L2a|LINE|L2 106869 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr3-3070 chr3 129383428 129383638 + 10.5 0.000 non-coding (NR_003111, exon 4 of 4) non-coding (NR_003111, exon 4 of 4) 13815 NR_002992 677797 Hs.711399 NR_002992 ENSG00000207088 SNORA7B ACA7B small nucleolar RNA, H/ACA box 7B snoRNA chr5-2234 chr5 7807542 7807752 + 10.5 0.000 intron (NM_020546, intron 22 of 24) intron (NM_020546, intron 22 of 24) 43486 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding chr7-2270 chr7 5470411 5470621 + 10.5 0.000 intron (NM_001363441, intron 4 of 4) intron (NM_001363441, intron 4 of 4) 25401 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr4-4384 chr4 41134882 41135092 + 10.5 0.000 intron (NM_173075, intron 2 of 16) intron (NM_173075, intron 2 of 16) 79555 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr13-1748 chr13 110323162 110323372 + 10.5 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) 15983 NM_001846 1284 Hs.508716 NM_001846 ENSG00000134871 COL4A2 BSVD2|ICH|POREN2 collagen type IV alpha 2 chain protein-coding chr3-5084 chr3 45897678 45897888 + 10.5 0.000 intron (NM_001256369, intron 3 of 3) (TCTT)n|Simple_repeat|Simple_repeat 11240 NM_006641 10803 Hs.225946 NM_006641 ENSG00000173585 CCR9 CC-CKR-9|CDw199|GPR-9-6|GPR28 C-C motif chemokine receptor 9 protein-coding chr12-4138 chr12 74317126 74317336 + 10.5 0.000 Intergenic Intergenic -24600 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr9-2828 chr9 125558491 125558701 + 10.5 0.000 intron (NM_001006619, intron 6 of 10) intron (NM_001006619, intron 6 of 10) 148612 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr9-6543 chr9 114899585 114899795 + 10.5 0.000 intron (NM_001252290, intron 4 of 4) intron (NM_001252290, intron 4 of 4) 30905 NM_001252290 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr12-6996 chr12 30839354 30839564 + 10.5 0.000 Intergenic Intergenic 43778 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr22-617 chr22 26429017 26429227 + 10.5 0.000 promoter-TSS (NM_020437) promoter-TSS (NM_020437) -138 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr5-5106 chr5 99828130 99828340 + 10.5 0.000 Intergenic Tigger2|DNA|TcMar-Tigger 294245 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr2-9183 chr2 215411101 215411311 + 10.5 0.000 intron (NM_212482, intron 13 of 45) intron (NM_212482, intron 13 of 45) 24862 NM_001365519 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr5-642 chr5 96662896 96663106 + 10.5 0.000 promoter-TSS (NM_001330628) promoter-TSS (NM_001330628) -24 NM_001330628 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr15-1837 chr15 47812379 47812589 + 10.5 0.000 intron (NR_120336, intron 3 of 4) intron (NR_120336, intron 3 of 4) 33752 NR_120336 101928442 Hs.242804 NR_120336 ENSG00000259572 LINC01491 - long intergenic non-protein coding RNA 1491 ncRNA chr7-3129 chr7 50795654 50795864 + 10.5 0.000 Intergenic L3|LINE|CR1 -2306 NM_001371008 chr8-4324 chr8 99774902 99775112 + 10.5 0.000 intron (NM_017890, intron 40 of 61) L2c|LINE|L2 118700 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr1-6492 chr1 22550997 22551207 + 10.5 0.000 Intergenic Intergenic -12387 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr17-1635 chr17 17235870 17236080 + 10.5 0.000 intron (NM_001353230, intron 1 of 14) intron (NM_001353230, intron 1 of 14) 1193 NM_144606 201163 Hs.31652 NM_144606 ENSG00000154803 FLCN BHD|DENND8B|FLCL folliculin protein-coding chr10-4733 chr10 879115 879325 + 10.5 0.000 intron (NM_001351277, intron 3 of 17) intron (NM_001351277, intron 3 of 17) 52485 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr1-6341 chr1 6013190 6013400 + 10.5 0.000 intron (NM_001199861, intron 1 of 15) L2b|LINE|L2 -13038 NM_003636 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr1-9898 chr1 69880052 69880262 + 10.5 0.000 intron (NM_001370785, intron 7 of 26) intron (NM_001370785, intron 7 of 26) -39165 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chr2-11337 chr2 201999129 201999339 + 10.5 0.000 Intergenic Intergenic -35353 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chrX-5045 chrX 123121520 123121730 + 10.5 0.000 Intergenic L1PA13|LINE|L1 -62618 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr22-2998 chr22 19586238 19586448 + 10.5 0.000 Intergenic LTR1A2|LTR|ERV1 -19504 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr17-2916 chr17 44688959 44689169 + 10.5 0.000 intron (NM_144609, intron 1 of 4) intron (NM_144609, intron 1 of 4) 712 NM_144609 124808 Hs.579115 NM_144609 ENSG00000180329 CCDC43 - coiled-coil domain containing 43 protein-coding chr5-2130 chr5 78677809 78678019 + 10.5 0.000 Intergenic Intergenic -29142 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr10-4950 chr10 27723541 27723751 + 10.5 0.000 intron (NM_001242702, intron 5 of 6) intron (NM_001242702, intron 5 of 6) -20969 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr1-3486 chr1 76681954 76682164 + 10.5 0.000 Intergenic MLT1M|LTR|ERVL-MaLR 97208 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr12-5156 chr12 101782361 101782571 + 10.5 0.000 intron (NM_024312, intron 5 of 20) L2a|LINE|L2 -42994 NM_001177948 50511 Hs.506504 NM_153694 ENSG00000139351 SYCP3 COR1|RPRGL4|SCP3|SPGF4 synaptonemal complex protein 3 protein-coding chr10-3936 chr10 92604261 92604471 + 10.5 0.000 intron (NM_004523, intron 1 of 21) intron (NM_004523, intron 1 of 21) 11236 NM_004523 3832 Hs.8878 NM_004523 ENSG00000138160 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding chr6-2164 chr6 19959898 19960108 + 10.5 0.000 Intergenic Intergenic 122633 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr4-2322 chr4 125607090 125607300 + 10.5 0.000 Intergenic Intergenic 99936 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr1-4002 chr1 166070326 166070536 + 10.5 0.000 non-coding (NR_135199, exon 2 of 3) non-coding (NR_135199, exon 2 of 3) 84367 NR_030626 100126349 NR_030626 ENSG00000215952 MIR921 MIRN921|hsa-mir-921 microRNA 921 ncRNA chr7-2061 chr7 130988294 130988504 + 10.5 0.000 intron (NR_109855, intron 2 of 4) intron (NR_109855, intron 2 of 4) 74935 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chrX-1538 chrX 39689715 39689925 + 10.5 0.000 Intergenic Intergenic 28604 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr14-2483 chr14 98543584 98543794 + 10.5 0.000 Intergenic MIRc|SINE|MIR -167924 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr12-1499 chr12 49544291 49544501 + 10.5 0.000 intron (NM_012284, intron 7 of 14) intron (NM_012284, intron 7 of 14) 5366 NM_012284 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr4-2905 chr4 82704113 82704323 + 10.5 0.000 intron (NM_001037582, intron 2 of 4) intron (NM_001037582, intron 2 of 4) 49212 NR_030301 693160 NR_030301 ENSG00000207746 MIR575 MIRN575|hsa-mir-575 microRNA 575 ncRNA chr19-1248 chr19 48390553 48390763 + 10.5 0.000 intron (NM_006801, intron 1 of 4) intron (NM_006801, intron 1 of 4) 893 NM_006801 10945 Hs.515515 NM_006801 ENSG00000105438 KDELR1 ERD2|ERD2.1|HDEL|PM23 KDEL endoplasmic reticulum protein retention receptor 1 protein-coding chr2-12057 chr2 31082248 31082458 + 10.5 0.000 intron (NM_001329095, intron 1 of 15) intron (NM_001329095, intron 1 of 15) 47287 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr17-5529 chr17 43398724 43398934 + 10.5 0.000 promoter-TSS (NM_001661) promoter-TSS (NM_001661) -164 NM_001661 379 Hs.183153 NM_001661 ENSG00000175906 ARL4D ARF4L|ARL6 ADP ribosylation factor like GTPase 4D protein-coding chr16-6662 chr16 69456907 69457117 + 10.5 0.000 intron (NM_030579, intron 3 of 4) intron (NM_030579, intron 3 of 4) 32417 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr10-3735 chr10 117790824 117791034 + 10.5 0.000 Intergenic Intergenic -245861 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr2-3043 chr2 82927345 82927555 + 10.5 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 70647 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr19-2387 chr19 5783232 5783442 + 10.5 0.000 exon (NM_001134316, exon 3 of 3) exon (NM_001134316, exon 3 of 3) 1409 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chr10-2786 chr10 130786778 130786988 + 10.5 0.000 Intergenic Intergenic 175785 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr15-1469 chr15 101023979 101024189 + 10.5 0.000 intron (NM_024652, intron 15 of 33) intron (NM_024652, intron 15 of 33) 104727 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr1-6055 chr1 87363052 87363262 + 10.5 0.000 intron (NR_038324, intron 1 of 3) intron (NR_038324, intron 1 of 3) 8498 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr4-2946 chr4 102299103 102299313 + 10.5 0.000 intron (NM_022154, intron 5 of 7) intron (NM_022154, intron 5 of 7) 25104 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr12-7594 chr12 77924838 77925048 + 10.5 0.000 intron (NM_001024383, intron 1 of 39) MIRc|SINE|MIR 94049 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr11-3671 chr11 128053327 128053537 + 10.5 0.000 Intergenic Intergenic -155334 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr5-6773 chr5 87443029 87443239 + 10.5 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -30101 NM_001363539 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr9-5258 chr9 79302392 79302602 + 10.5 0.000 Intergenic Intergenic -156831 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chrX-578 chrX 70613496 70613706 + 10.5 0.000 intron (NM_001003811, intron 21 of 30) L1M1|LINE|L1 -157607 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr18-1349 chr18 203268 203478 + 10.5 0.000 intron (NM_001037334, intron 11 of 14) MER5A|DNA|hAT-Charlie 44816 NM_005151 9097 Hs.464416 NM_005151 ENSG00000101557 USP14 TGT ubiquitin specific peptidase 14 protein-coding chr18-2856 chr18 8563300 8563510 + 10.5 0.000 Intergenic Intergenic -46040 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chrX-928 chrX 24117300 24117510 + 10.5 0.000 Intergenic L1MEf|LINE|L1 -31577 NM_001330327 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr1-6847 chr1 102807903 102808113 + 10.5 0.000 Intergenic L1PA4|LINE|L1 300488 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr3-5709 chr3 15164390 15164600 + 10.5 0.000 TTS (NR_027927) TTS (NR_027927) 41464 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen type VI alpha 4 pseudogene 1 pseudo chr14-1443 chr14 91250107 91250317 + 10.5 0.000 intron (NM_001348437, intron 1 of 2) intron (NM_001348437, intron 1 of 2) 3668 NM_001348437 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr12-8093 chr12 118206395 118206605 + 10.5 0.000 intron (NM_001346490, intron 12 of 21) intron (NM_001346490, intron 12 of 21) -15965 NM_001346495 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chrX-1248 chrX 97389477 97389687 + 10.5 0.000 intron (NM_007309, intron 25 of 26) intron (NM_007309, intron 25 of 26) 174953 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr20-2078 chr20 18207242 18207452 + 10.5 0.000 Intergenic MER5B|DNA|hAT-Charlie 62248 NR_028402 57325 Hs.488051 NM_020536 ENSG00000149474 KAT14 ATAC2|CRP2BP|CSRP2BP|PRO1194|dJ717M23.1 lysine acetyltransferase 14 protein-coding chr11-8445 chr11 112798776 112798986 + 10.5 0.000 Intergenic Intergenic -162539 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr19-3538 chr19 44869996 44870206 + 10.5 0.000 intron (NM_001042724, intron 2 of 8) intron (NM_001042724, intron 2 of 8) -21119 NM_001128916 10452 Hs.655909 NM_006114 ENSG00000130204 TOMM40 C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 translocase of outer mitochondrial membrane 40 protein-coding chr5-4361 chr5 170186589 170186799 + 10.5 0.000 Intergenic Intergenic 12447 NR_108022 100507267 Hs.634846 NR_108022 LINC01187 CTB-27N1.1|KIDR long intergenic non-protein coding RNA 1187 ncRNA chr18-1078 chr18 43934846 43935056 + 10.5 0.000 Intergenic Intergenic 596746 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr1-3626 chr1 45803677 45803887 + 10.5 0.000 5' UTR (NM_015112, exon 1 of 29) 5' UTR (NM_015112, exon 1 of 29) 169 NM_001319245 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr6-2367 chr6 135871150 135871360 + 10.5 0.000 intron (NM_018945, intron 1 of 12) intron (NM_018945, intron 1 of 12) 19554 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr8-1785 chr8 89813057 89813267 + 10.5 0.000 Intergenic L2a|LINE|L2 55346 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding chr7-1730 chr7 12660387 12660597 + 10.5 0.000 TTS (NM_001112706) TTS (NM_001112706) -26335 NM_212460 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr15-1747 chr15 50885349 50885559 + 10.5 0.000 Intergenic Intergenic -23229 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr20-1239 chr20 35052626 35052836 + 10.5 0.000 intron (NM_199368, intron 5 of 18) AluSz|SINE|Alu 40076 NM_015638 26133 Hs.168073 NM_015638 ENSG00000100991 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel subfamily C member 4 associated protein protein-coding chr17-3892 chr17 50396519 50396729 + 10.5 0.000 intron (NM_018509, intron 1 of 6) intron (NM_018509, intron 1 of 6) 899 NM_018509 55379 Hs.370927 NM_018509 ENSG00000108829 LRRC59 PRO1855|p34 leucine rich repeat containing 59 protein-coding chr3-5252 chr3 107798461 107798671 + 10.5 0.000 exon (NM_001142568, exon 16 of 18) exon (NM_001142568, exon 16 of 18) 79502 NR_024276 151658 Hs.159043 NR_015414 ENSG00000241469 LINC00635 - long intergenic non-protein coding RNA 635 ncRNA chr11-3230 chr11 69321184 69321394 + 10.5 0.000 Intergenic LTR33|LTR|ERVL 27134 NM_001293294 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr11-3329 chr11 113529346 113529556 + 10.5 0.000 Intergenic L2c|LINE|L2 -54053 NM_000795 1813 Hs.73893 NM_000795 ENSG00000149295 DRD2 D2DR|D2R dopamine receptor D2 protein-coding chr17-6027 chr17 78719491 78719701 + 10.5 0.000 intron (NM_004762, intron 1 of 12) intron (NM_004762, intron 1 of 12) -2564 NM_001292019 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr6-2716 chr6 51299995 51300205 + 10.5 0.000 Intergenic Intergenic -321770 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr2-5282 chr2 63827695 63827905 + 10.5 0.000 Intergenic LTR55|LTR|ERVL? -13164 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr8-1837 chr8 141269110 141269320 + 10.5 0.000 Intergenic Intergenic -14586 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr10-6165 chr10 3750290 3750500 + 10.5 0.000 non-coding (NR_131187, exon 2 of 2) non-coding (NR_131187, exon 2 of 2) 34814 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr11-5085 chr11 115636910 115637120 + 10.5 0.000 Intergenic Intergenic 97747 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr22-3619 chr22 20704610 20704820 + 10.5 0.000 TTS (NR_026815) TTS (NR_026815) 3601 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chr11-2881 chr11 43422884 43423094 + 10.5 0.000 intron (NM_018259, intron 16 of 23) L2a|LINE|L2 64069 NM_018259 55761 Hs.191186 NM_018259 ENSG00000052841 TTC17 - tetratricopeptide repeat domain 17 protein-coding chr7-2822 chr7 99408092 99408302 + 10.5 0.000 promoter-TSS (NM_001370407) promoter-TSS (NM_001370407) 400 NM_014891 11333 Hs.632296 NM_014891 ENSG00000106244 PDAP1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding chr1-4641 chr1 179411895 179412105 + 10.5 0.000 intron (NR_073544, intron 12 of 25) AluJb|SINE|Alu 45956 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr1-6060 chr1 90926199 90926409 + 10.5 0.000 intron (NM_032186, intron 2 of 3) MER72|LTR|ERV1 74545 NR_146610 105378854 Hs.606283 NR_146610 LINC01763 - long intergenic non-protein coding RNA 1763 ncRNA chr16-3003 chr16 29024158 29024368 + 10.5 0.000 Intergenic MIRc|SINE|MIR 39211 NM_001014987 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr4-3864 chr4 133565420 133565630 + 10.5 0.000 Intergenic Intergenic 416231 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr4-1801 chr4 26235573 26235783 + 10.5 0.000 Intergenic Intergenic -84032 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr4-2949 chr4 102816106 102816316 + 10.5 0.000 intron (NM_181893, intron 1 of 6) intron (NM_181893, intron 1 of 6) 9649 NM_001300795 7323 Hs.518773 NM_003340 ENSG00000109332 UBE2D3 E2(17)KB3|UBC4/5|UBCH5C ubiquitin conjugating enzyme E2 D3 protein-coding chr10-1997 chr10 51097581 51097791 + 10.5 0.000 intron (NM_006258, intron 1 of 17) intron (NM_006258, intron 1 of 17) 23199 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr16-2968 chr16 11637297 11637507 + 10.5 0.000 Intergenic Intergenic -31053 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr15-5206 chr15 95365580 95365790 + 10.5 0.000 Intergenic Intergenic -38585 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr6-3893 chr6 63643792 63644002 + 10.5 0.000 intron (NM_001290260, intron 1 of 3) MARNA|DNA|TcMar-Mariner -2629 NM_015153 23469 Hs.348921 NM_015153 ENSG00000118482 PHF3 - PHD finger protein 3 protein-coding chr5-1130 chr5 78648945 78649155 + 10.5 0.000 promoter-TSS (NM_005779) promoter-TSS (NM_005779) -278 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr2-2163 chr2 237571943 237572153 + 10.5 0.000 Intergenic Intergenic 5474 NM_015893 51052 Hs.247710 NM_015893 ENSG00000071677 PRLH PRH|PRRP prolactin releasing hormone protein-coding chr3-6334 chr3 80697932 80698142 + 10.5 0.000 Intergenic MER70B|LTR|ERVL -66860 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr2-6960 chr2 121427256 121427466 + 10.5 0.000 intron (NM_001207051, intron 21 of 37) (CAA)n|Simple_repeat|Simple_repeat -103519 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr1-8569 chr1 171640678 171640888 + 10.5 0.000 intron (NM_000261, intron 1 of 2) MER74A|LTR|ERVL 11905 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr7-4676 chr7 39251233 39251443 + 10.5 0.000 intron (NM_001370959, intron 4 of 9) intron (NM_001370959, intron 4 of 9) 77796 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr9-2232 chr9 2159915 2160125 + 10.5 0.000 intron (NM_001289400, intron 2 of 7) intron (NM_001289400, intron 2 of 7) 1564 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr9-5286 chr9 83444340 83444550 + 10.5 0.000 intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 23297 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chrX-789 chrX 50839006 50839216 + 10.5 0.000 Intergenic MamRep38|DNA|hAT -25067 NR_027121 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding chr12-3148 chr12 46825763 46825973 + 10.5 0.000 intron (NM_018018, intron 1 of 16) intron (NM_018018, intron 1 of 16) 129 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr3-4033 chr3 70546604 70546814 + 10.5 0.000 Intergenic Intergenic -234071 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr13-1169 chr13 37492742 37492952 + 10.5 0.000 Intergenic Intergenic -8063 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chr10-4570 chr10 105934503 105934713 + 10.5 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -114275 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr1-10987 chr1 216653241 216653451 + 10.5 0.000 intron (NM_001243506, intron 2 of 6) intron (NM_001243506, intron 2 of 6) 70083 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr10-3967 chr10 113648202 113648412 + 10.5 0.000 intron (NM_001322945, intron 9 of 40) L4_C_Mam|LINE|RTE-X 15734 NM_198060 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr10-2215 chr10 60414706 60414916 + 10.5 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -24936 NM_020987 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr21-959 chr21 44479658 44479868 + 10.5 0.000 Intergenic LTR13|LTR|ERVK -5808 NR_155204 111216286 Hs.572852 NR_155204 LINC02575 - long intergenic non-protein coding RNA 2575 ncRNA chr2-10434 chr2 203342019 203342229 + 10.5 0.000 intron (NM_001282932, intron 1 of 9) intron (NM_001282932, intron 1 of 9) 13730 NM_005759 10152 Hs.471156 NM_005759 ENSG00000138443 ABI2 ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB abl interactor 2 protein-coding chr10-8444 chr10 86313815 86314025 + 10.5 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) -49132 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr13-1206 chr13 51717834 51718044 + 10.5 0.000 intron (NM_052950, intron 4 of 11) intron (NM_052950, intron 4 of 11) 86223 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr8-1401 chr8 41961186 41961396 + 10.5 0.000 intron (NM_001305878, intron 8 of 13) L2a|LINE|L2 -64550 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr3-7624 chr3 22957599 22957809 + 10.5 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 244874 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr10-7126 chr10 99998996 99999206 + 10.5 0.000 intron (NM_015221, intron 1 of 16) intron (NM_015221, intron 1 of 16) 10846 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr2-4072 chr2 126893761 126893971 + 10.5 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -5024 NM_001322244 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chrX-3994 chrX 15384375 15384585 + 10.5 0.000 promoter-TSS (NM_004469) promoter-TSS (NM_004469) -67 NM_004469 2277 Hs.11392 NM_004469 ENSG00000165197 VEGFD FIGF|VEGF-D vascular endothelial growth factor D protein-coding chr6-3778 chr6 17867391 17867601 + 10.5 0.000 intron (NM_001105567, intron 4 of 36) MIR|SINE|MIR 120139 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr4-6745 chr4 5463932 5464142 + 10.5 0.000 intron (NM_001306082, intron 10 of 12) MSTB|LTR|ERVL-MaLR -60532 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr1-7261 chr1 230266223 230266433 + 10.5 0.000 intron (NM_004481, intron 14 of 15) intron (NM_004481, intron 14 of 15) 160004 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr17-3429 chr17 17509610 17509820 + 10.5 0.000 intron (NM_148173, intron 4 of 6) intron (NM_148173, intron 4 of 6) -13320 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr11-3296 chr11 87377426 87377636 + 10.5 0.000 Intergenic L2c|LINE|L2 339597 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr6-2458 chr6 35052861 35053071 + 10.5 0.000 intron (NM_015245, intron 11 of 23) intron (NM_015245, intron 11 of 23) 88373 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr1-6910 chr1 148263691 148263901 + 10.5 0.000 Intergenic Intergenic -16725 NR_120331 101927468 Hs.515867 NR_120331 LOC101927468 - uncharacterized LOC101927468 ncRNA chr7-9510 chr7 138408139 138408349 + 10.5 0.000 Intergenic Intergenic -52015 NM_015905 8805 Hs.490287 NM_003852 ENSG00000122779 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding chr15-935 chr15 77760444 77760654 + 10.5 0.000 intron (NM_001301186, intron 2 of 5) MER102a|DNA|hAT-Charlie 26500 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr1-8706 chr1 227776352 227776562 + 10.5 0.000 non-coding (NR_136657, exon 4 of 4) non-coding (NR_136657, exon 4 of 4) -39260 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr7-2100 chr7 5277892 5278102 + 10.5 0.000 Intergenic AluSx|SINE|Alu -4946 NM_153247 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr20-493 chr20 844487 844697 + 10.5 0.000 promoter-TSS (NM_031424) promoter-TSS (NM_031424) -51 NM_031424 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding chr9-5638 chr9 120839178 120839388 + 10.5 0.000 intron (NM_001270427, intron 1 of 8) intron (NM_001270427, intron 1 of 8) 3639 NM_001270427 5711 Hs.193725 NM_005047 ENSG00000095261 PSMD5 S5B proteasome 26S subunit, non-ATPase 5 protein-coding chr2-12927 chr2 101217794 101218004 + 10.5 0.000 Intergenic Charlie15a|DNA|hAT-Charlie -34987 NM_017546 55571 Hs.744080 NM_017546 ENSG00000158435 CNOT11 C2orf29|C40 CCR4-NOT transcription complex subunit 11 protein-coding chr20-1069 chr20 32068980 32069190 + 10.5 0.000 intron (NM_001172132, intron 2 of 13) intron (NM_001172132, intron 2 of 13) 16843 NM_001172129 3055 Hs.655210 NM_002110 ENSG00000101336 HCK JTK9|p59Hck|p61Hck HCK proto-oncogene, Src family tyrosine kinase protein-coding chr14-1763 chr14 87992468 87992678 + 10.5 0.000 intron (NM_001201402, intron 1 of 16) CpG 609 NM_000153 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr8-3191 chr8 110488982 110489192 + 10.5 0.000 Intergenic L1MA1|LINE|L1 -513316 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr20-356 chr20 50794928 50795138 + 10.5 0.000 exon (NM_198799, exon 1 of 5) exon (NM_198799, exon 1 of 5) 139 NM_017843 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr5-4132 chr5 83313476 83313686 + 10.5 0.000 intron (NM_022550, intron 7 of 7) Tigger1|DNA|TcMar-Tigger -158093 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr1-5043 chr1 87131944 87132154 + 10.5 0.000 non-coding (NR_026985, exon 1 of 4) non-coding (NR_026985, exon 1 of 4) 123 NR_026986 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr19-4158 chr19 38040137 38040347 + 10.5 0.000 intron (NM_015073, intron 2 of 21) Kanga2_a|DNA|TcMar-Tc2 -122854 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr15-1572 chr15 72319553 72319763 + 10.5 0.000 exon (NM_001172684, exon 1 of 12) exon (NM_001172684, exon 1 of 12) 288 NM_001172684 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr1-4296 chr1 21418715 21418925 + 10.5 0.000 Intergenic AluJo|SINE|Alu -21317 NR_046176 84224 Hs.325422 NM_032264 ENSG00000142794 NBPF3 AE2 NBPF member 3 protein-coding chr13-1264 chr13 110222279 110222489 + 10.5 0.000 intron (NM_001845, intron 2 of 51) intron (NM_001845, intron 2 of 51) 84773 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr4-3413 chr4 57854818 57855028 + 10.5 0.000 Intergenic L2|LINE|L2 429051 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr20-2057 chr20 9131792 9132002 + 10.5 0.000 intron (NM_001172646, intron 1 of 37) MLT1H2|LTR|ERVL-MaLR 62843 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr13-1981 chr13 21115117 21115327 + 10.5 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -25292 NM_005870 10284 Hs.524899 NM_005870 ENSG00000150459 SAP18 2HOR0202|SAP18P Sin3A associated protein 18 protein-coding chr7-8995 chr7 100515188 100515398 + 10.5 0.000 Intergenic Intergenic -23910 NM_006076 3268 Hs.521083 NM_006076 ENSG00000106351 AGFG2 HRBL|RABR ArfGAP with FG repeats 2 protein-coding chr10-7770 chr10 34638471 34638681 + 10.5 0.000 intron (NM_001184789, intron 2 of 22) intron (NM_001184789, intron 2 of 22) 176720 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr12-2075 chr12 386649 386859 + 10.5 0.000 intron (NM_001042603, intron 1 of 27) Tigger4b|DNA|TcMar-Tigger 2566 NM_001042603 5927 Hs.76272 NM_005056 ENSG00000073614 KDM5A RBBP-2|RBBP2|RBP2 lysine demethylase 5A protein-coding chr15-1276 chr15 92810824 92811034 + 10.5 0.000 Intergenic Intergenic 15445 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr4-8169 chr4 129950485 129950695 + 10.5 0.000 intron (NR_151713, intron 14 of 16) intron (NR_151713, intron 14 of 16) 178971 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr4-5099 chr4 147979344 147979554 + 10.5 0.000 intron (NM_024605, intron 18 of 22) L1PA17|LINE|L1 196854 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr9-4386 chr9 135703124 135703334 + 10.5 0.000 intron (NM_001272003, intron 1 of 30) intron (NM_001272003, intron 1 of 30) 1044 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr7-1797 chr7 88243331 88243541 + 10.5 0.000 Intergenic Intergenic -16443 NM_001256892 6717 Hs.489040 NM_003130 ENSG00000075142 SRI CP-22|CP22|SCN|V19 sorcin protein-coding chr22-1812 chr22 35011544 35011754 + 10.5 0.000 Intergenic LTR89|LTR|ERVL? -13733 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr17-6505 chr17 29257141 29257351 + 10.5 0.000 3' UTR (NM_020772, exon 4 of 4) 3' UTR (NM_020772, exon 4 of 4) 10389 NM_005208 1411 Hs.46275 NM_005208 ENSG00000108255 CRYBA1 CRYB1|CTRCT10 crystallin beta A1 protein-coding chr3-2941 chr3 57068555 57068765 + 10.5 0.000 intron (NM_181727, intron 1 of 1) intron (NM_181727, intron 1 of 1) 7996 NM_181727 353324 Hs.129794 NM_181727 ENSG00000186451 SPATA12 SRG5 spermatogenesis associated 12 protein-coding chr4-3062 chr4 142752602 142752812 + 10.5 0.000 intron (NM_001331040, intron 1 of 25) intron (NM_001331040, intron 1 of 25) 93828 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr3-2940 chr3 57062068 57062278 + 10.5 0.000 intron (NM_181727, intron 1 of 1) intron (NM_181727, intron 1 of 1) 1509 NM_181727 353324 Hs.129794 NM_181727 ENSG00000186451 SPATA12 SRG5 spermatogenesis associated 12 protein-coding chr10-3181 chr10 87700271 87700481 + 10.5 0.000 intron (NM_001015880, intron 1 of 12) intron (NM_001015880, intron 1 of 12) 40498 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr17-1832 chr17 8359882 8360092 + 10.5 0.000 non-coding (NR_024447, exon 1 of 1) non-coding (NR_024447, exon 1 of 1) 554 NR_024447 100128288 Hs.549913 NR_024447 LOC100128288 - uncharacterized LOC100128288 ncRNA chr15-2067 chr15 60476833 60477043 + 10.5 0.000 intron (NR_147171, intron 2 of 16) intron (NR_147171, intron 2 of 16) 2204 NM_024611 79664 Hs.200943 NM_024611 ENSG00000128915 ICE2 BRCC1|NARG2 interactor of little elongation complex ELL subunit 2 protein-coding chr11-4324 chr11 70208788 70208998 + 10.5 0.000 Intergenic Intergenic 5730 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr7-6388 chr7 152085114 152085324 + 10.5 0.000 intron (NM_001371463, intron 2 of 12) L2|LINE|L2 10182 NM_001371474 chr3-4882 chr3 173083597 173083807 + 10.5 0.000 intron (NM_031955, intron 2 of 10) L1PA10|LINE|L1 57533 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr2-4296 chr2 234451923 234452133 + 10.5 0.000 intron (NR_146988, intron 1 of 2) intron (NR_146988, intron 1 of 2) 2567 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr14-1342 chr14 83483186 83483396 + 10.5 0.000 Intergenic Intergenic 840659 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr7-3738 chr7 70698307 70698517 + 10.5 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -433732 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr1-7413 chr1 39285431 39285641 + 10.5 0.000 intron (NM_012090, intron 12 of 92) intron (NM_012090, intron 12 of 92) -123537 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr3-4567 chr3 163875287 163875497 + 10.5 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 296164 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr4-1719 chr4 184788105 184788315 + 10.5 0.000 intron (NM_001995, intron 3 of 20) MER103C|DNA|hAT-Charlie 10836 NR_003542 643036 Hs.689630 NR_003542 ENSG00000249138 SLED1 - proteoglycan 3, pro eosinophil major basic protein 2 pseudogene pseudo chr3-3390 chr3 55477398 55477608 + 10.5 0.000 intron (NM_003392, intron 3 of 4) intron (NM_003392, intron 3 of 4) 3895 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr15-1785 chr15 77740883 77741093 + 10.5 0.000 intron (NM_001301186, intron 2 of 5) intron (NM_001301186, intron 2 of 5) -20237 NM_001301197 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr7-7522 chr7 104639224 104639434 + 10.5 0.000 intron (NM_199000, intron 1 of 2) L1PREC2|LINE|L1 164763 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr1-5397 chr1 8854562 8854772 + 10.5 0.000 Intergenic Intergenic 11923 NR_106786 102465436 NR_106786 ENSG00000274258 MIR6728 hsa-mir-6728 microRNA 6728 ncRNA chr6-1664 chr6 158849816 158850026 + 10.5 0.000 intron (NR_028496, intron 2 of 2) intron (NR_028496, intron 2 of 2) 7711 NR_028496 202459 Hs.487035 NM_145303 ENSG00000243775 OSTCP1 DC2L|OSTCL oligosaccharyltransferase complex subunit pseudogene 1 pseudo chr3-3335 chr3 5426278 5426488 + 10.5 0.000 Intergenic Intergenic -176128 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr14-1619 chr14 102320190 102320400 + 10.5 0.000 intron (NM_018335, intron 1 of 7) intron (NM_018335, intron 1 of 7) 549 NM_018335 55778 Hs.743359 NM_018335 ENSG00000022976 ZNF839 C14orf131 zinc finger protein 839 protein-coding chr2-7212 chr2 218068245 218068455 + 10.5 0.000 promoter-TSS (NM_198483) promoter-TSS (NM_198483) -665 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr12-2658 chr12 26748631 26748841 + 10.5 0.000 intron (NM_002223, intron 2 of 56) intron (NM_002223, intron 2 of 56) 84458 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr10-3613 chr10 93572516 93572726 + 10.5 0.000 intron (NM_181745, intron 1 of 3) intron (NM_181745, intron 1 of 3) 5956 NM_181745 338557 Hs.661022 NM_181745 ENSG00000186188 FFAR4 BMIQ10|GPR120|GPR129|GT01|O3FAR1|PGR4 free fatty acid receptor 4 protein-coding chr3-4890 chr3 179431996 179432206 + 10.5 0.000 intron (NM_021629, intron 1 of 9) L2|LINE|L2 19369 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr10-1582 chr10 16856637 16856847 + 10.5 0.000 intron (NM_001081, intron 59 of 66) intron (NM_001081, intron 59 of 66) -39288 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr9-3164 chr9 116238469 116238679 + 10.5 0.000 intron (NM_002581, intron 7 of 21) intron (NM_002581, intron 7 of 21) 84783 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr6-5672 chr6 106192970 106193180 + 10.5 0.000 intron (NR_104402, intron 5 of 5) intron (NR_104402, intron 5 of 5) 94134 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr6-3983 chr6 111143422 111143632 + 10.5 0.000 intron (NM_018593, intron 1 of 5) AluJb|SINE|Alu 29693 NR_145796 109623478 NR_145796 SNORD166 - small nucleolar RNA, C/D box 166 snoRNA chr1-15031 chr1 93582023 93582233 + 10.5 0.000 intron (NM_001308251, intron 3 of 7) intron (NM_001308251, intron 3 of 7) 3034 NM_001308251 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr10-3311 chr10 3089373 3089583 + 10.5 0.000 intron (NM_001242339, intron 3 of 23) L1MA4|LINE|L1 -15131 NM_001323070 5214 Hs.26010 NM_002627 ENSG00000067057 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding chr17-8274 chr17 67606768 67606978 + 10.5 0.000 intron (NM_181671, intron 5 of 9) intron (NM_181671, intron 5 of 9) -110960 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr3-3972 chr3 52973824 52974034 + 10.5 0.000 intron (NM_016329, intron 1 of 20) intron (NM_016329, intron 1 of 20) 72144 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr3-4538 chr3 127392751 127392961 + 10.5 0.000 Intergenic Intergenic -2186 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr19-2016 chr19 47836808 47837018 + 10.5 0.000 intron (NM_000554, intron 3 of 3) (ATGT)n|Simple_repeat|Simple_repeat 14976 NM_000554 1406 Hs.617342 NM_000554 ENSG00000105392 CRX CORD2|CRD|LCA7|OTX3 cone-rod homeobox protein-coding chr8-7402 chr8 139864111 139864321 + 10.5 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -161093 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr5-1827 chr5 95779541 95779751 + 10.5 0.000 intron (NM_014899, intron 8 of 11) intron (NM_014899, intron 8 of 11) 43080 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr4-5121 chr4 150746278 150746488 + 10.5 0.000 intron (NM_001367550, intron 35 of 56) intron (NM_001367550, intron 35 of 56) 164232 NM_006439 10586 Hs.584852 NM_006439 ENSG00000181541 MAB21L2 MCOPS14|MCSKS14 mab-21 like 2 protein-coding chr19-2402 chr19 15303210 15303420 + 10.5 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) -22864 NM_058243 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr7-2046 chr7 106326954 106327164 + 10.5 0.000 Intergenic Intergenic -42076 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr12-3730 chr12 21846244 21846454 + 10.5 0.000 intron (NM_005691, intron 23 of 37) MLT1J-int|LTR|ERVL-MaLR -71643 NM_004982 3764 Hs.102308 NM_004982 ENSG00000121361 KCNJ8 KIR6.1|uKATP-1 potassium voltage-gated channel subfamily J member 8 protein-coding chr14-3198 chr14 73076501 73076711 + 10.5 0.000 intron (NM_021239, intron 3 of 18) intron (NM_021239, intron 3 of 18) 18072 NM_021239 58517 Hs.531106 NM_021239 ENSG00000119707 RBM25 NET52|RED120|RNPC7|S164|Snu71|fSAP94 RNA binding motif protein 25 protein-coding chr15-1540 chr15 65228155 65228365 + 10.5 0.000 Intergenic Intergenic -16787 NM_003613 8483 Hs.442180 NM_003613 ENSG00000138615 CILP CILP-1|HsT18872 cartilage intermediate layer protein protein-coding chr3-1346 chr3 129339360 129339570 + 10.5 0.000 Intergenic SVA_D|Retroposon|SVA -23179 NM_006026 8971 Hs.75307 NM_006026 ENSG00000184897 H1FX H1.10|H1X H1 histone family member X protein-coding chr1-6238 chr1 225321418 225321628 + 10.5 0.000 intron (NM_001367479, intron 61 of 85) intron (NM_001367479, intron 61 of 85) 106515 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr14-4217 chr14 96333923 96334133 + 10.5 0.000 intron (NM_018036, intron 7 of 41) intron (NM_018036, intron 7 of 41) 29313 NM_018036 55102 Hs.168241 NM_018036 ENSG00000066739 ATG2B C14orf103 autophagy related 2B protein-coding chr1-6639 chr1 44384152 44384362 + 10.5 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -20903 NM_001319956 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr17-6232 chr17 19586846 19587056 + 10.5 0.000 Intergenic MER47A|DNA|TcMar-Tigger 29391 NR_003022 677882 Hs.658450 NR_003022 ENSG00000266079 SNORA59B ACA59 small nucleolar RNA, H/ACA box 59B snoRNA chr17-2330 chr17 50956773 50956983 + 10.5 0.000 Intergenic Intergenic -88900 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr10-2659 chr10 93894781 93894991 + 10.5 0.000 intron (NR_144336, intron 1 of 2) MIR3|SINE|MIR 908 NM_001345993 159371 Hs.632085 NM_153226 ENSG00000176273 SLC35G1 C10orf60|POST|TMEM20 solute carrier family 35 member G1 protein-coding chr8-2116 chr8 143223014 143223224 + 10.5 0.000 Intergenic MER4D0|LTR|ERV1 9901 NM_001301772 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr17-2463 chr17 44768591 44768801 + 10.5 0.000 intron (NM_001318933, intron 2 of 26) intron (NM_001318933, intron 2 of 26) 9708 NM_001318933 4185 Hs.6088 NM_002390 ENSG00000073670 ADAM11 MDC ADAM metallopeptidase domain 11 protein-coding chr12-3172 chr12 50567975 50568185 + 10.5 0.000 intron (NM_173602, intron 1 of 37) L1MEf|LINE|L1 63095 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr3-11056 chr3 183845118 183845328 + 10.5 0.000 intron (NM_001324437, intron 4 of 7) intron (NM_001324437, intron 4 of 7) -19646 NM_024871 79929 Hs.478465 NM_024871 ENSG00000180834 MAP6D1 MAPO6D1|SL21 MAP6 domain containing 1 protein-coding chr21-407 chr21 42009338 42009548 + 10.5 0.000 non-coding (NR_119384, exon 1 of 2) non-coding (NR_119384, exon 1 of 2) 249 NR_119384 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA chr9-5680 chr9 123987881 123988091 + 10.5 0.000 Intergenic Intergenic 21410 NR_135129 100505588 Hs.547168 NR_135129 ENSG00000236668 LOC100505588 - uncharacterized LOC100505588 ncRNA chr2-5267 chr2 61554579 61554789 + 10.5 0.000 Intergenic L2a|LINE|L2 -16328 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr2-4418 chr2 121356042 121356252 + 10.5 0.000 intron (NM_015282, intron 36 of 38) intron (NM_015282, intron 36 of 38) -70945 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr3-3201 chr3 189910389 189910599 + 10.5 0.000 Intergenic L2a|LINE|L2 80572 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr1-6351 chr1 6572759 6572969 + 10.5 0.000 intron (NM_177540, intron 2 of 4) intron (NM_177540, intron 2 of 4) -7130 NM_005341 3104 Hs.502330 NM_005341 ENSG00000204859 ZBTB48 HKR3|TZAP|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding chr14-2141 chr14 80211258 80211468 + 10.5 0.000 promoter-TSS (NR_038355) promoter-TSS (NR_038355) -56 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chr12-3276 chr12 68805638 68805848 + 10.5 0.000 promoter-TSS (NR_073494) promoter-TSS (NR_073494) -249 NR_073494 100130075 Hs.744781 NR_073494 LOC100130075 - SUZ RNA binding domain containing 1 pseudogene pseudo chr14-2671 chr14 73619179 73619389 + 10.5 0.000 exon (NM_001365789, exon 4 of 4) exon (NM_001365789, exon 4 of 4) 2440 NM_001037162 641372 Hs.122038 NM_001037162 ENSG00000205669 ACOT6 C14orf42|c14_5530 acyl-CoA thioesterase 6 protein-coding chr4-3282 chr4 136048603 136048813 + 10.5 0.000 Intergenic AluY|SINE|Alu -135028 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr3-5069 chr3 42514793 42515003 + 10.5 0.000 intron (NM_004624, intron 2 of 12) intron (NM_004624, intron 2 of 12) 12255 NM_004624 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr7-6226 chr7 131670039 131670249 + 10.5 0.000 Intergenic MLT1I-int|LTR|ERVL-MaLR -113516 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr5-1717 chr5 137091490 137091700 + 10.5 0.000 intron (NM_004598, intron 5 of 10) intron (NM_004598, intron 5 of 10) -36602 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr6-6476 chr6 111090877 111091087 + 10.5 0.000 intron (NM_018593, intron 1 of 5) MIR3|SINE|MIR 3479 NM_018593 117247 Hs.591327 NM_018593 ENSG00000112394 SLC16A10 MCT10|PRO0813|TAT1 solute carrier family 16 member 10 protein-coding chr5-5515 chr5 143554371 143554581 + 10.5 0.000 Intergenic MIRc|SINE|MIR -118964 NM_001018077 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr1-4784 chr1 16026288 16026498 + 10.5 0.000 intron (NM_001257139, intron 4 of 18) intron (NM_001257139, intron 4 of 18) 4357 NM_001257139 1187 Hs.591533 NM_004070 ENSG00000186510 CLCNKA CLCK1|ClC-K1|hClC-Ka chloride voltage-gated channel Ka protein-coding chr4-1809 chr4 40114080 40114290 + 10.5 0.000 intron (NM_001318359, intron 8 of 18) intron (NM_001318359, intron 8 of 18) -56986 NR_027277 344967 Hs.534633 NR_027277 ENSG00000205794 LOC344967 - acyl-CoA thioesterase 7 pseudogene pseudo chr2-2411 chr2 27569512 27569722 + 10.5 0.000 Intergenic Intergenic -6905 NM_032266 84226 Hs.131021 NM_032266 ENSG00000221843 C2orf16 - chromosome 2 open reading frame 16 protein-coding chr9-4163 chr9 9944104 9944314 + 10.5 0.000 intron (NM_002839, intron 4 of 45) LTR16A|LTR|ERVL 144817 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr6-7731 chr6 90362357 90362567 + 10.5 0.000 Intergenic Intergenic 49720 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr18-2761 chr18 489754 489964 + 10.5 0.000 intron (NM_130386, intron 1 of 9) HAL1|LINE|L1 10842 NM_130386 81035 Hs.464422 NM_030781 ENSG00000158270 COLEC12 CLP1|NSR2|SCARA4|SRCL collectin subfamily member 12 protein-coding chr10-8836 chr10 110312471 110312681 + 10.5 0.000 Intergenic Intergenic -7656 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr11-6318 chr11 61791956 61792166 + 10.5 0.000 promoter-TSS (NM_004111) promoter-TSS (NM_004111) 500 NR_030342 693196 NR_030342 ENSG00000284108 MIR611 MIRN611|hsa-mir-611 microRNA 611 ncRNA chr4-2786 chr4 25034924 25035134 + 10.5 0.000 Intergenic L2b|LINE|L2 -4083 NM_018176 55203 Hs.12488 NM_018176 ENSG00000153012 LGI2 LGIL2 leucine rich repeat LGI family member 2 protein-coding chr1-3146 chr1 65264624 65264834 + 10.5 0.000 promoter-TSS (NM_014787) promoter-TSS (NM_014787) -20 NM_014787 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr1-8178 chr1 18933759 18933969 + 10.5 0.000 intron (NM_001136265, intron 1 of 8) L1MB3|LINE|L1 22812 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr22-4249 chr22 47698929 47699139 + 10.5 0.000 intron (NR_122046, intron 6 of 8) MER50B|LTR|ERV1 67360 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA chr9-5076 chr9 34084686 34084896 + 10.5 0.000 Intergenic Intergenic -35592 NM_001370059 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr11-3205 chr11 66178806 66179016 + 10.5 0.000 intron (NM_018026, intron 1 of 23) Charlie1b|DNA|hAT-Charlie -78383 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr1-10847 chr1 204518867 204519077 + 10.5 0.000 intron (NM_001278517, intron 1 of 7) intron (NM_001278517, intron 1 of 7) 2566 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chrX-2443 chrX 80573407 80573617 + 10.5 0.000 Intergenic CpG 153065 NM_152630 169966 Hs.367959 NM_152630 ENSG00000174016 TENT5D CT1.26|CT112|FAM46D terminal nucleotidyltransferase 5D protein-coding chr4-1337 chr4 161554436 161554646 + 10.5 0.000 intron (NM_001128428, intron 8 of 14) intron (NM_001128428, intron 8 of 14) -468192 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chrX-2673 chrX 116854535 116854745 + 10.5 0.000 Intergenic L1PA4|LINE|L1 -36780 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr1-14705 chr1 64114724 64114934 + 10.5 0.000 intron (NM_005012, intron 4 of 8) MIR3|SINE|MIR -1038 NR_110665 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr8-2816 chr8 125435768 125435978 + 10.5 0.000 intron (NM_025195, intron 2 of 2) intron (NM_025195, intron 2 of 2) 3664 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr2-4677 chr2 208249551 208249761 + 10.5 0.000 intron (NM_001282386, intron 3 of 9) intron (NM_001282386, intron 3 of 9) 4647 NM_001282387 3417 Hs.593422 NM_005896 ENSG00000138413 IDH1 HEL-216|HEL-S-26|IDCD|IDH|IDP|IDPC|PICD isocitrate dehydrogenase (NADP(+)) 1, cytosolic protein-coding chr6-3672 chr6 150243822 150244032 + 10.5 0.000 intron (NM_030949, intron 3 of 3) L1ME1|LINE|L1 100883 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr19-2967 chr19 15108472 15108682 + 10.5 0.000 intron (NM_001300910, intron 1 of 7) intron (NM_001300910, intron 1 of 7) 1176 NM_033025 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding chr18-1789 chr18 11740811 11741021 + 10.5 0.000 intron (NM_182978, intron 1 of 11) intron (NM_182978, intron 1 of 11) -10556 NM_001142339 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr2-3040 chr2 74184293 74184503 + 10.5 0.000 Intergenic AluJb|SINE|Alu -5519 NM_001317110 55233 Hs.602092 NM_018221 ENSG00000114978 MOB1A C2orf6|MATS1|MOB1|MOBK1B|MOBKL1B|Mob4B MOB kinase activator 1A protein-coding chr9-1684 chr9 87711884 87712094 + 10.5 0.000 Intergenic Intergenic -14130 NM_001912 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr9-2967 chr9 137709409 137709619 + 10.5 0.000 intron (NM_001354612, intron 1 of 8) intron (NM_001354612, intron 1 of 8) 78892 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr7-7654 chr7 147215361 147215571 + 10.5 0.000 intron (NM_014141, intron 7 of 22) L1MC1|LINE|L1 -117857 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr12-7036 chr12 39103613 39103823 + 10.5 0.000 Intergenic Intergenic -198127 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr11-1652 chr11 119218496 119218706 + 10.5 0.000 intron (NM_005188, intron 1 of 15) Tigger7|DNA|TcMar-Tigger 12325 NM_005188 867 Hs.504096 NM_005188 ENSG00000110395 CBL C-CBL|CBL2|FRA11B|NSLL|RNF55 Cbl proto-oncogene protein-coding chr11-2253 chr11 102237293 102237503 + 10.5 0.000 Intergenic Intergenic -80086 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr17-3834 chr17 42860250 42860460 + 10.5 0.000 Intergenic L2|LINE|L2 -6790 NR_002773 90586 Hs.367781 NR_002773 ENSG00000260105 AOC4P AOC4|UPAT amine oxidase copper containing 4, pseudogene pseudo chr5-3228 chr5 92391634 92391844 + 10.5 0.000 Intergenic L1MC1|LINE|L1 -1008422 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr6-4770 chr6 73747384 73747594 + 10.5 0.000 intron (NM_001159588, intron 4 of 31) L2c|LINE|L2 51286 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr17-3853 chr17 44518182 44518392 + 10.5 0.000 Intergenic AluJb|SINE|Alu -14881 NM_001002909 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr6-1676 chr6 5287626 5287836 + 10.5 0.000 intron (NM_006567, intron 1 of 6) intron (NM_006567, intron 1 of 6) 26218 NM_006567 10667 Hs.484547 NM_006567 ENSG00000145982 FARS2 COXPD14|FARS1|HSPC320|PheRS|SPG77|mtPheRS phenylalanyl-tRNA synthetase 2, mitochondrial protein-coding chr15-2106 chr15 67776727 67776937 + 10.5 0.000 intron (NM_001206804, intron 21 of 21) intron (NM_001206804, intron 21 of 21) -48677 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr4-947 chr4 139609609 139609819 + 10.5 0.000 Intergenic L1M4|LINE|L1 -52945 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr10-5613 chr10 94274625 94274835 + 10.5 0.000 intron (NM_001165979, intron 18 of 31) MER102b|DNA|hAT-Charlie 12340 NR_033969 100128054 Hs.677562 NR_033969 ENSG00000268894 PLCE1-AS1 - PLCE1 antisense RNA 1 ncRNA chr10-3556 chr10 78571138 78571348 + 10.5 0.000 Intergenic L2c|LINE|L2 303901 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr7-7527 chr7 105267514 105267724 + 10.5 0.000 intron (NM_182692, intron 2 of 15) intron (NM_182692, intron 2 of 15) 1458 NM_001350739 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr5-8373 chr5 122528375 122528585 + 10.5 0.000 Intergenic Intergenic -49393 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA chr1-4490 chr1 20289254 20289464 + 10.5 0.000 Intergenic Intergenic -1516 NM_001039500 127731 Hs.205178 NM_144623 ENSG00000158816 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding chr1-5183 chr1 171869314 171869524 + 10.5 0.000 intron (NM_001278252, intron 1 of 14) intron (NM_001278252, intron 1 of 14) 5227 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 - DNM3 intronic transcript 1 ncRNA chr19-4969 chr19 45526226 45526436 + 10.5 0.000 3' UTR (NM_003370, exon 13 of 13) 3' UTR (NM_003370, exon 13 of 13) 18852 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chrX-2826 chrX 136390585 136390795 + 10.5 0.000 intron (NM_153834, intron 16 of 25) intron (NM_153834, intron 16 of 25) 89727 NM_153834 139378 Hs.381354 NM_153834 ENSG00000156920 ADGRG4 GPR112|PGR17|RP1-299I16 adhesion G protein-coupled receptor G4 protein-coding chr10-8941 chr10 117093399 117093609 + 10.5 0.000 intron (NM_001258300, intron 1 of 17) AluSz6|SINE|Alu 33082 NM_001258300 57698 Hs.501140 NM_018330 ENSG00000187164 SHTN1 KIAA1598|shootin-1 shootin 1 protein-coding chr6-4152 chr6 388324 388534 + 10.5 0.000 Intergenic Intergenic -3323 NR_046000 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr17-3923 chr17 57975242 57975452 + 10.5 0.000 intron (NM_001330393, intron 6 of 6) intron (NM_001330393, intron 6 of 6) 12907 NM_001330393 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding chr20-1190 chr20 4210938 4211148 + 10.5 0.000 Intergenic Intergenic 17953 NR_033917 728228 Hs.636379 NR_033917 ENSG00000230176 LINC01433 - long intergenic non-protein coding RNA 1433 ncRNA chr6-5281 chr6 139156876 139157086 + 10.5 0.000 intron (NM_016217, intron 1 of 3) MER41A|LTR|ERV1 21901 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding chr9-2382 chr9 126439332 126439542 + 10.5 0.000 intron (NM_033446, intron 7 of 9) intron (NM_033446, intron 7 of 9) -28933 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr21-907 chr21 26946046 26946256 + 10.5 0.000 intron (NM_007038, intron 2 of 7) intron (NM_007038, intron 2 of 7) -7810 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 - microRNA 4759 ncRNA chr2-3944 chr2 63661218 63661428 + 10.5 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 72172 NM_001199112 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chr2-5864 chr2 239322251 239322461 + 10.5 0.000 intron (NM_006037, intron 2 of 26) MIR|SINE|MIR 16894 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr12-1372 chr12 54549285 54549495 + 10.5 0.000 promoter-TSS (NM_001288768) promoter-TSS (NM_001288768) -3 NM_001288768 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding chr9-3577 chr9 74667162 74667372 + 10.5 0.000 intron (NM_006914, intron 7 of 9) intron (NM_006914, intron 7 of 9) 51733 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr20-1482 chr20 10923046 10923256 + 10.5 0.000 Intergenic Intergenic -13879 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA chr1-6703 chr1 54918282 54918492 + 10.5 0.000 Intergenic HERV17-int|LTR|ERV1 -31192 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr6-1201 chr6 17589248 17589458 + 10.5 0.000 Intergenic MER5B|DNA|hAT-Charlie -10949 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr1-14633 chr1 56552339 56552549 + 10.5 0.000 intron (NM_003713, intron 1 of 5) intron (NM_003713, intron 1 of 5) 27119 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr6-2294 chr6 96303672 96303882 + 10.5 0.000 Intergenic Intergenic -218029 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr7-9265 chr7 124058203 124058413 + 10.5 0.000 Intergenic MIRb|SINE|MIR -25241 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr20-1759 chr20 49951010 49951220 + 10.5 0.000 intron (NM_018683, intron 5 of 5) intron (NM_018683, intron 5 of 5) 14718 NM_018683 55905 Hs.144949 NM_018683 ENSG00000124226 RNF114 PSORS12|ZNF313 ring finger protein 114 protein-coding chr10-3138 chr10 61835894 61836104 + 10.5 0.000 Intergenic Intergenic -65700 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr8-1354 chr8 102037904 102038114 + 10.5 0.000 intron (NM_001040624, intron 1 of 7) intron (NM_001040624, intron 1 of 7) 53577 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr7-7467 chr7 92786127 92786337 + 10.5 0.000 intron (NM_001259, intron 2 of 7) intron (NM_001259, intron 2 of 7) 47727 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr19-1628 chr19 55547340 55547550 + 10.5 0.000 Intergenic MIRb|SINE|MIR -1902 NM_001199824 100130827 Hs.712129 NM_001199824 ENSG00000231274 SBK3 SGK110 SH3 domain binding kinase family member 3 protein-coding chr15-4071 chr15 69828125 69828335 + 10.5 0.000 Intergenic Intergenic -7004 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr2-9506 chr2 237002344 237002554 + 10.5 0.000 Intergenic Helitron2Na_Mam|RC?|Helitron? 53718 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr15-5299 chr15 101373826 101374036 + 10.5 0.000 intron (NM_001291309, intron 9 of 19) intron (NM_001291309, intron 9 of 19) 39494 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr11-6093 chr11 34345945 34346155 + 10.5 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 11960 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11-2082 chr11 94543903 94544113 + 10.5 0.000 5' UTR (NM_002033, exon 1 of 1) 5' UTR (NM_002033, exon 1 of 1) 157 NM_002033 2526 Hs.390420 NM_002033 ENSG00000196371 FUT4 CD15|ELFT|FCT3A|FUC-TIV|FUTIV|LeX|SSEA-1 fucosyltransferase 4 protein-coding chr7-3687 chr7 48483740 48483950 + 10.5 0.000 intron (NM_152701, intron 47 of 61) intron (NM_152701, intron 47 of 61) 312387 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr4-7957 chr4 111064347 111064557 + 10.5 0.000 Intergenic Intergenic -203805 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr19-1508 chr19 50461278 50461488 + 10.5 0.000 intron (NM_004533, intron 24 of 27) L1MB5|LINE|L1 -15124 NM_175063 284361 Hs.448941 NM_175063 ENSG00000161671 EMC10 C19orf63|HSM1|HSS1 ER membrane protein complex subunit 10 protein-coding chr9-7623 chr9 38061558 38061768 + 10.5 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 7564 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr2-4507 chr2 23489250 23489460 + 10.5 0.000 intron (NM_052920, intron 2 of 13) Plat_L3|LINE|CR1 104176 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr8-2926 chr8 13730348 13730558 + 10.5 0.000 Intergenic Intergenic 100763 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr18-1649 chr18 58998693 58998903 + 10.5 0.000 Intergenic Intergenic -36881 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr11-6822 chr11 94752185 94752395 + 10.5 0.000 Intergenic (CCT)n|Simple_repeat|Simple_repeat -11935 NR_135093 105369438 Hs.568921 NR_135093 ENSG00000255929 LOC105369438 - uncharacterized LOC105369438 ncRNA chr7-2734 chr7 42941238 42941448 + 10.5 0.000 Intergenic Intergenic 8967 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr14-1461 chr14 103741482 103741692 + 10.5 0.000 intron (NM_015316, intron 11 of 16) intron (NM_015316, intron 11 of 16) 25843 NM_024071 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr15-4267 chr15 35300836 35301046 + 10.5 0.000 Intergenic Intergenic 63615 NR_003144 723972 Hs.631698 NR_003144 ENSG00000259516 ANP32AP1 - acidic nuclear phosphoprotein 32 family member A pseudogene 1 pseudo chr7-1637 chr7 32892158 32892368 + 10.5 0.000 promoter-TSS (NM_015483) promoter-TSS (NM_015483) -503 NM_015483 25948 Hs.372541 NM_015483 ENSG00000170852 KBTBD2 BKLHD1 kelch repeat and BTB domain containing 2 protein-coding chr15-2361 chr15 40214144 40214354 + 10.5 0.000 intron (NM_001211, intron 20 of 22) intron (NM_001211, intron 20 of 22) -3179 NM_001128629 106821730 Hs.732375 NM_001128628 ENSG00000259288 BUB1B-PAK6 PAK-5|PAK-6|PAK5|PAK6 BUB1B-PAK6 readthrough protein-coding chr16-1923 chr16 89939233 89939443 + 10.5 0.000 Intergenic Intergenic -9393 NM_001242821 54849 Hs.62771 NM_017702 ENSG00000140995 DEF8 - differentially expressed in FDCP 8 homolog protein-coding chr16-1525 chr16 56318363 56318573 + 10.5 0.000 intron (NM_138736, intron 3 of 7) intron (NM_138736, intron 3 of 7) 72948 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr12-4621 chr12 41212647 41212857 + 10.5 0.000 intron (NM_001164595, intron 3 of 9) L2b|LINE|L2 24432 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr15-1265 chr15 84654765 84654975 + 10.5 0.000 promoter-TSS (NR_130944) promoter-TSS (NR_130944) -527 NR_130946 84942 Hs.745027 NM_032856 ENSG00000177082 WDR73 GAMOS|GAMOS1|HSPC264 WD repeat domain 73 protein-coding chr5-2884 chr5 96565842 96566052 + 10.5 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -96090 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr4-3632 chr4 13888239 13888449 + 10.5 0.000 intron (NR_121681, intron 3 of 3) L1MC5|LINE|L1 -223624 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr7-3746 chr7 73669490 73669700 + 10.5 0.000 intron (NM_001077621, intron 2 of 3) intron (NM_001077621, intron 2 of 3) 1764 NM_001077621 155382 Hs.647037 NM_152560 ENSG00000176428 VPS37D WBSCR24 VPS37D subunit of ESCRT-I protein-coding chr3-4856 chr3 158057721 158057931 + 10.5 0.000 Intergenic Intergenic 48337 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr17-3163 chr17 65494300 65494510 + 10.5 0.000 Intergenic MIR3|SINE|MIR 36864 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr4-4609 chr4 77289296 77289506 + 10.5 0.000 Intergenic Intergenic 132194 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr21-225 chr21 32475295 32475505 + 10.5 0.000 intron (NR_104472, intron 3 of 6) L1ME4c|LINE|L1 62694 NM_001320744 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr12-4533 chr12 25648888 25649098 + 10.5 0.000 promoter-TSS (NM_001352232) promoter-TSS (NM_001352232) -415 NM_001352234 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr4-2264 chr4 172198815 172199025 + 10.5 0.000 intron (NM_001034845, intron 2 of 12) intron (NM_001034845, intron 2 of 12) -385313 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr20-1596 chr20 4824759 4824969 + 10.5 0.000 Intergenic Intergenic -1256 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr6-6177 chr6 7329523 7329733 + 10.5 0.000 intron (NM_001170693, intron 12 of 12) L2c|LINE|L2 -16429 NM_001292008 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr6-5358 chr6 149542673 149542883 + 10.5 0.000 intron (NM_139126, intron 1 of 12) intron (NM_139126, intron 1 of 12) 3265 NM_139126 85313 Hs.744238 NM_139126 ENSG00000131013 PPIL4 HDCME13P peptidylprolyl isomerase like 4 protein-coding chr2-2088 chr2 226484351 226484561 + 10.5 0.000 Intergenic Intergenic 174337 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr4-2292 chr4 15213408 15213618 + 10.5 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) -126475 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr9-3652 chr9 94607448 94607658 + 10.5 0.000 intron (NM_000507, intron 4 of 6) intron (NM_000507, intron 4 of 6) -13729 NM_003837 8789 Hs.61255 NM_003837 ENSG00000130957 FBP2 - fructose-bisphosphatase 2 protein-coding chr2-6029 chr2 108083572 108083782 + 10.5 0.000 Intergenic Intergenic -30922 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA chrX-1665 chrX 151729424 151729634 + 10.5 0.000 Intergenic L2b|LINE|L2 -5217 NM_005140 1260 Hs.447360 NM_005140 ENSG00000183862 CNGA2 CNCA|CNCA1|CNG2|OCNC1|OCNCALPHA|OCNCa cyclic nucleotide gated channel alpha 2 protein-coding chr12-4749 chr12 52140491 52140701 + 10.5 0.000 Intergenic Intergenic 47027 NR_120440 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr10-2185 chr10 7916054 7916264 + 10.5 0.000 intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 97654 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding chr2-9728 chr2 64919505 64919715 + 10.5 0.000 intron (NR_036586, intron 1 of 2) intron (NR_036586, intron 1 of 2) 12837 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr8-1393 chr8 30485516 30485726 + 10.5 0.000 intron (NM_001008710, intron 4 of 8) intron (NM_001008710, intron 4 of 8) -100220 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr7-2029 chr7 73842728 73842938 + 10.5 0.000 promoter-TSS (NM_152559) promoter-TSS (NM_152559) -317 NM_152559 155368 Hs.647042 NM_152559 ENSG00000165171 METTL27 WBSCR27 methyltransferase like 27 protein-coding chr4-2028 chr4 3369319 3369529 + 10.5 0.000 promoter-TSS (NM_198227) promoter-TSS (NM_198227) -774 NM_198227 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr12-6226 chr12 27772785 27772995 + 10.5 0.000 Intergenic Intergenic -1308 NM_001146221 100287284 NM_001146221 ENSG00000205693 MANSC4 - MANSC domain containing 4 protein-coding chr4-3751 chr4 83306960 83307170 + 10.5 0.000 intron (NM_001098540, intron 8 of 11) LTR8|LTR|ERV1 -21931 NM_015697 27235 Hs.144304 NM_015697 ENSG00000173085 COQ2 CL640|COQ10D1|MSA1|PHB:PPT coenzyme Q2, polyprenyltransferase protein-coding chr5-4711 chr5 40996667 40996877 + 10.5 0.000 Intergenic L2a|LINE|L2 74570 NM_173489 133558 Hs.97714 NM_173489 ENSG00000171495 MROH2B HEATR7B2|SPIF maestro heat like repeat family member 2B protein-coding chr1-4405 chr1 201350221 201350431 + 10.5 0.000 Intergenic Intergenic 27354 NM_001276347 7139 Hs.533613 NM_000364 ENSG00000118194 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T2, cardiac type protein-coding chr3-5414 chr3 164779810 164780020 + 10.5 0.000 intron (NR_126405, intron 1 of 3) MLT1G1|LTR|ERVL-MaLR 51565 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr2-6214 chr2 25895572 25895782 + 10.5 0.000 Intergenic L2a|LINE|L2 -17190 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr7-2850 chr7 105912328 105912538 + 10.5 0.000 Intergenic Intergenic -35848 NM_020725 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr5-2192 chr5 147689180 147689390 + 10.5 0.000 intron (NM_001270934, intron 1 of 20) L2a|LINE|L2 93443 NM_001282282 9832 Hs.740461 NM_014790 ENSG00000176049 JAKMIP2 JAMIP2|NECC1 janus kinase and microtubule interacting protein 2 protein-coding chr1-5062 chr1 97277665 97277875 + 10.5 0.000 intron (NR_046590, intron 2 of 4) L2|LINE|L2 181847 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr8-2620 chr8 61884653 61884863 + 10.5 0.000 Intergenic Intergenic -5081 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr9-8241 chr9 110691549 110691759 + 10.5 0.000 intron (NM_001166281, intron 3 of 11) intron (NM_001166281, intron 3 of 11) 22863 NM_001166280 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr2-3448 chr2 110953295 110953505 + 10.5 0.000 intron (NM_001142807, intron 12 of 17) L1MEd|LINE|L1 162188 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr10-2707 chr10 103265819 103266029 + 10.5 0.000 Intergenic Intergenic -11214 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr17-681 chr17 44968353 44968563 + 10.5 0.000 promoter-TSS (NM_006688) promoter-TSS (NM_006688) -155 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr2-11082 chr2 122474225 122474435 + 10.5 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 599151 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr12-5434 chr12 122852636 122852846 + 10.5 0.000 intron (NM_003959, intron 7 of 31) intron (NM_003959, intron 7 of 31) 17284 NM_001303097 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr10-6591 chr10 82194570 82194780 + 10.5 0.000 intron (NM_001165973, intron 2 of 10) intron (NM_001165973, intron 2 of 10) 38245 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr2-6161 chr2 239203641 239203851 + 10.5 0.000 intron (NM_006037, intron 3 of 26) intron (NM_006037, intron 3 of 26) -8289 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr13-2999 chr13 102699584 102699794 + 10.5 0.000 Intergenic Intergenic -5168 NM_001010977 196541 Hs.508623 NM_001010977 ENSG00000139780 METTL21C C13orf39 methyltransferase like 21C protein-coding chr12-2974 chr12 111371967 111372177 + 10.5 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -2977 NM_001177997 144717 Hs.173088 NM_144671 ENSG00000198324 PHETA1 FAM109A|IPIP27A|SES1 PH domain containing endocytic trafficking adaptor 1 protein-coding chr15-2553 chr15 50241538 50241748 + 10.5 0.000 TTS (NM_002112) TTS (NM_002112) 24083 NM_001306146 3067 Hs.1481 NM_002112 ENSG00000140287 HDC - histidine decarboxylase protein-coding chr2-8832 chr2 171811254 171811464 + 10.5 0.000 intron (NR_047549, intron 10 of 16) intron (NR_047549, intron 10 of 16) 82885 NM_003705 8604 Hs.470608 NM_003705 ENSG00000115840 SLC25A12 AGC1|ARALAR|EIEE39 solute carrier family 25 member 12 protein-coding chr4-3858 chr4 128528206 128528416 + 10.5 0.000 Intergenic Intergenic 100295 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr2-3201 chr2 218069820 218070030 + 10.5 0.000 intron (NR_034176, intron 4 of 13) intron (NR_034176, intron 4 of 13) 910 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chrX-2848 chrX 139741149 139741359 + 10.5 0.000 intron (NM_001353812, intron 26 of 29) intron (NM_001353812, intron 26 of 29) -33032 NM_001099855 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr14-1218 chr14 90300932 90301142 + 10.5 0.000 intron (NM_017970, intron 7 of 13) intron (NM_017970, intron 7 of 13) 30904 NM_017970 55051 Hs.528131 NM_017970 ENSG00000119720 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding chr1-2485 chr1 154405249 154405459 + 10.5 0.000 promoter-TSS (NM_181359) promoter-TSS (NM_181359) 11 NM_181359 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr14-1937 chr14 22898507 22898717 + 10.5 0.000 3' UTR (NM_001352766, exon 16 of 16) 3' UTR (NM_001352766, exon 16 of 16) 15390 NM_173527 161253 Hs.444911 NM_173527 ENSG00000139890 REM2 - RRAD and GEM like GTPase 2 protein-coding chr1-3827 chr1 24202025 24202235 + 10.5 0.000 intron (NR_027087, intron 1 of 2) intron (NR_027087, intron 1 of 2) 1890 NR_027087 284632 Hs.638906 NR_027087 ENSG00000230023 LINC02800 - long intergenic non-protein coding RNA 2800 ncRNA chr5-6985 chr5 149912506 149912716 + 10.5 0.000 intron (NM_000440, intron 6 of 21) MLT1I|LTR|ERVL-MaLR 20366 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr9-1623 chr9 130578853 130579063 + 10.5 0.000 promoter-TSS (NM_003934) promoter-TSS (NM_003934) 536 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr11-1291 chr11 118791069 118791279 + 10.5 0.000 promoter-TSS (NM_004397) promoter-TSS (NM_004397) -10 NM_004397 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr5-8976 chr5 161690722 161690932 + 10.5 0.000 intron (NM_000811, intron 7 of 8) intron (NM_000811, intron 7 of 8) 5106 NM_000811 2559 Hs.90791 NM_000811 ENSG00000145863 GABRA6 - gamma-aminobutyric acid type A receptor alpha6 subunit protein-coding chr4-2272 chr4 183541381 183541591 + 10.5 0.000 Intergenic Intergenic 35404 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr11-4370 chr11 74781779 74781989 + 10.5 0.000 intron (NM_001098638, intron 1 of 5) MIR|SINE|MIR 33035 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr3-6536 chr3 117691347 117691557 + 10.5 0.000 promoter-TSS (NR_146652) promoter-TSS (NR_146652) -527 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr2-3910 chr2 47616475 47616685 + 10.5 0.000 Intergenic Intergenic -46249 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr7-9669 chr7 152342769 152342979 + 10.5 0.000 intron (NM_170606, intron 2 of 58) L1MC1|LINE|L1 93129 NM_170606 58508 Hs.647120 NM_021230 ENSG00000055609 KMT2C HALR|KLEFS2|MLL3 lysine methyltransferase 2C protein-coding chr5-4491 chr5 10086543 10086753 + 10.5 0.000 Intergenic Intergenic 163240 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr10-5994 chr10 124837096 124837306 + 10.5 0.000 TTS (NM_032182) TTS (NM_032182) 35382 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr6-3007 chr6 44409524 44409734 + 10.5 0.000 intron (NM_001253, intron 8 of 15) HAL1|LINE|L1 21923 NM_001253 988 Hs.485471 NM_001253 ENSG00000096401 CDC5L CDC5|CDC5-LIKE|CEF1|PCDC5RP|dJ319D22.1 cell division cycle 5 like protein-coding chr18-764 chr18 11025590 11025800 + 10.5 0.000 intron (NM_022068, intron 2 of 51) intron (NM_022068, intron 2 of 51) 123067 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr18-2839 chr18 7255624 7255834 + 10.5 0.000 Intergenic MIRb|SINE|MIR 24625 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr1-7036 chr1 176073614 176073824 + 10.5 0.000 intron (NM_022457, intron 11 of 19) intron (NM_022457, intron 11 of 19) -105179 NR_002998 677679 NR_002998 ENSG00000252906 SCARNA3 HBI-100 small Cajal body-specific RNA 3 ncRNA chr5-5519 chr5 143685460 143685670 + 10.5 0.000 Intergenic Intergenic 5705 NR_049829 100846991 NR_049829 ENSG00000266478 MIR5197 - microRNA 5197 ncRNA chr1-4744 chr1 6491438 6491648 + 10.5 0.000 promoter-TSS (NM_001042664) promoter-TSS (NM_001042664) 124 NM_020631 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr11-4811 chr11 8098392 8098602 + 10.5 0.000 intron (NM_177972, intron 8 of 11) intron (NM_177972, intron 8 of 11) 17135 NM_177972 7275 Hs.568986 NM_003320 ENSG00000166402 TUB RDOB|rd5 TUB bipartite transcription factor protein-coding chr12-3700 chr12 3425962 3426172 + 10.5 0.000 intron (NM_001256536, intron 1 of 9) Harlequin-int|LTR|ERV1 44718 NM_001256536 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr14-4700 chr14 58082489 58082699 + 10.5 0.000 intron (NM_001001872, intron 5 of 7) intron (NM_001001872, intron 5 of 7) 69619 NM_001001872 145407 Hs.26766 NM_001001872 ENSG00000139971 ARMH4 C14orf37|UT2|c14_5376 armadillo like helical domain containing 4 protein-coding chr19-3211 chr19 52637572 52637782 + 10.5 0.000 intron (NM_001348016, intron 1 of 3) intron (NM_001348016, intron 1 of 3) 714 NM_018300 55769 Hs.467210 NM_018300 ENSG00000167766 ZNF83 HPF1|ZNF816B zinc finger protein 83 protein-coding chr5-4900 chr5 68047099 68047309 + 10.5 0.000 Intergenic L1PA16|LINE|L1 -142672 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr7-830 chr7 69598102 69598312 + 10.5 0.000 promoter-TSS (NM_001127232) promoter-TSS (NM_001127232) -268 NM_001127231 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr11-8432 chr11 109163064 109163274 + 10.5 0.000 Intergenic L1PA10|LINE|L1 -259021 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr16-3412 chr16 85272164 85272374 + 10.5 0.000 Intergenic CpG -10689 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr15-520 chr15 40291379 40291589 + 10.5 0.000 exon (NM_001284297, exon 26 of 32) exon (NM_001284297, exon 26 of 32) -8898 NM_001190479 100131244 Hs.711376 NM_001190479 ENSG00000230778 ANKRD63 - ankyrin repeat domain 63 protein-coding chr10-2718 chr10 108812615 108812825 + 10.5 0.000 Intergenic LOR1b|LTR|ERV1 -743427 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr5-2828 chr5 43603636 43603846 + 10.5 0.000 promoter-TSS (NR_073113) promoter-TSS (NR_073113) -511 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr1-5660 chr1 31579410 31579620 + 10.5 0.000 intron (NM_001204414, intron 3 of 10) intron (NM_001204414, intron 3 of 10) 1370 NM_001204415 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr11-2788 chr11 76007385 76007595 + 10.5 0.000 intron (NM_003369, intron 9 of 14) intron (NM_003369, intron 9 of 14) 192280 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr13-2600 chr13 74115077 74115287 + 10.5 0.000 intron (NM_007249, intron 1 of 7) intron (NM_007249, intron 1 of 7) 18747 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr5-4775 chr5 55228822 55229032 + 10.5 0.000 Intergenic Intergenic -1612 NM_001190787 345643 Hs.394578 NM_001190787 ENSG00000234602 MCIDAS IDAS|MCI|MCIN multiciliate differentiation and DNA synthesis associated cell cycle protein protein-coding chr17-2790 chr17 5275450 5275660 + 10.5 0.000 Intergenic MIRc|SINE|MIR -6729 NM_001291582 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr1-8399 chr1 80051948 80052158 + 10.5 0.000 Intergenic HERVL18-int|LTR|ERVL -483702 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr4-6472 chr4 147550627 147550837 + 10.5 0.000 Intergenic Intergenic -66665 NM_018241 55751 Hs.203896 NM_018241 ENSG00000164168 TMEM184C TMEM34 transmembrane protein 184C protein-coding chr2-4064 chr2 120772220 120772430 + 10.5 0.000 intron (NM_001371271, intron 1 of 13) intron (NM_001371271, intron 1 of 13) -19956 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr17-5884 chr17 70595890 70596100 + 10.5 0.000 Intergenic L1MEg1|LINE|L1 426460 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr4-4323 chr4 32492430 32492640 + 10.5 0.000 Intergenic ERVL-E-int|LTR|ERVL 141497 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chrX-618 chrX 39688971 39689181 + 10.5 0.000 Intergenic CpG 27860 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr6-2397 chr6 148645735 148645945 + 10.5 0.000 Intergenic L1ME1|LINE|L1 -101190 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr1-3601 chr1 25047628 25047838 + 10.5 0.000 Intergenic Intergenic 24230 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr7-7564 chr7 119959831 119960041 + 10.5 0.000 Intergenic Intergenic -52561 NR_131961 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr1-5889 chr1 5562451 5562661 + 10.5 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 300185 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr11-2816 chr11 121534173 121534383 + 10.5 0.000 intron (NM_003105, intron 12 of 47) Tigger19a|DNA|TcMar-Tigger 81964 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr7-6634 chr7 123972583 123972793 + 10.5 0.000 Intergenic AluJb|SINE|Alu -21934 NR_133947 105375483 Hs.435972 NR_133947 ENSG00000241345 LOC105375483 - uncharacterized LOC105375483 ncRNA chr9-3166 chr9 117415925 117416135 + 10.5 0.000 promoter-TSS (NM_001365069) promoter-TSS (NM_001365069) -973 NM_014010 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr3-3322 chr3 194043082 194043292 + 10.5 0.000 intron (NR_136179, intron 1 of 2) intron (NR_136179, intron 1 of 2) 26342 NR_136181 285389 Hs.157102 NR_136179 ENSG00000230102 LINC02028 - long intergenic non-protein coding RNA 2028 ncRNA chr5-2775 chr5 171962606 171962816 + 10.5 0.000 intron (NM_012300, intron 1 of 12) intron (NM_012300, intron 1 of 12) 44162 NM_033645 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr7-8924 chr7 95327482 95327692 + 10.5 0.000 Intergenic L2a|LINE|L2 -3055 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr3-7386 chr3 74894882 74895092 + 10.5 0.000 Intergenic Intergenic -319489 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr9-3259 chr9 19576219 19576429 + 10.5 0.000 intron (NM_020344, intron 5 of 9) intron (NM_020344, intron 5 of 9) 167315 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr11-4305 chr11 68303975 68304185 + 10.5 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -8511 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr17-4466 chr17 58814377 58814587 + 10.5 0.000 intron (NM_014906, intron 1 of 6) MIRc|SINE|MIR 58613 NR_048561 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding chr1-5080 chr1 109391320 109391530 + 10.5 0.000 intron (NM_002959, intron 1 of 19) MIR3|SINE|MIR 1932 NM_001205228 6272 Hs.485195 NM_002959 ENSG00000134243 SORT1 Gp95|LDLCQ6|NT3|NTR3 sortilin 1 protein-coding chr17-4263 chr17 61000986 61001196 + 10.5 0.000 intron (NM_001330413, intron 15 of 25) intron (NM_001330413, intron 15 of 25) 323240 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr15-2169 chr15 79381004 79381214 + 10.5 0.000 intron (NM_001330376, intron 2 of 2) Charlie2a|DNA|hAT-Charlie -51407 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr12-6159 chr12 7636512 7636722 + 10.5 0.000 Intergenic L2c|LINE|L2 29291 NM_001644 339 Hs.560 NM_001644 ENSG00000111701 APOBEC1 APOBEC-1|BEDP|CDAR1|HEPR apolipoprotein B mRNA editing enzyme catalytic subunit 1 protein-coding chr1-1603 chr1 68293623 68293833 + 10.5 0.000 Intergenic Intergenic -61182 NM_001193334 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chr12-4773 chr12 53123340 53123550 + 10.5 0.000 intron (NM_003578, intron 13 of 14) intron (NM_003578, intron 13 of 14) 19959 NM_003578 8435 Hs.656544 NM_003578 ENSG00000167780 SOAT2 ACACT2|ACAT2|ARGP2 sterol O-acyltransferase 2 protein-coding chr18-1738 chr18 6409787 6409997 + 10.5 0.000 intron (NM_001365765, intron 1 of 18) L2a|LINE|L2 5019 NM_173464 91133 Hs.128279 NM_173464 ENSG00000154655 L3MBTL4 HsT1031 L3MBTL histone methyl-lysine binding protein 4 protein-coding chr18-2040 chr18 46321346 46321556 + 10.5 0.000 Intergenic L1MB4|LINE|L1 -12567 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr19-4683 chr19 17849270 17849480 + 10.5 0.000 Intergenic Intergenic -1343 NM_000215 3718 Hs.515247 NM_000215 ENSG00000105639 JAK3 JAK-3|JAK3_HUMAN|JAKL|L-JAK|LJAK Janus kinase 3 protein-coding chr2-11139 chr2 140893436 140893646 + 10.5 0.000 intron (NM_018557, intron 23 of 90) MIRb|SINE|MIR -306856 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr19-2600 chr19 1974876 1975086 + 10.5 0.000 intron (NM_001319, intron 2 of 11) intron (NM_001319, intron 2 of 11) -20432 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr8-6725 chr8 87093390 87093600 + 10.5 0.000 intron (NM_173538, intron 4 of 10) MLT2D|LTR|ERVL 227080 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr9-1893 chr9 122468757 122468967 + 10.5 0.000 Intergenic ERV24B_Prim-int|LTR|ERV1 9064 NM_001004451 347168 Hs.632692 NM_001004451 ENSG00000136834 OR1J1 OR9-18|hg32 olfactory receptor family 1 subfamily J member 1 protein-coding chr10-1331 chr10 97828071 97828281 + 10.5 0.000 TTS (NR_108035) TTS (NR_108035) 21622 NR_108035 100505561 Hs.351904 NR_108035 ENSG00000227356 LINC00866 - long intergenic non-protein coding RNA 866 ncRNA chr11-4004 chr11 5736609 5736819 + 10.5 0.000 exon (NM_001005180, exon 1 of 1) exon (NM_001005180, exon 1 of 1) 266 NM_001005180 387748 Hs.689609 NM_001005180 ENSG00000181023 OR56B1 OR11-65|OR56B1P olfactory receptor family 56 subfamily B member 1 protein-coding chr16-3893 chr16 75532919 75533129 + 10.5 0.000 intron (NM_024533, intron 2 of 2) intron (NM_024533, intron 2 of 2) 2146 NM_024533 23563 Hs.745424 NM_012126 ENSG00000135702 CHST5 I-GlcNAc-6-ST|I-GlcNAc6ST|glcNAc6ST-3|gn6st-3|hIGn6ST carbohydrate sulfotransferase 5 protein-coding chr1-6290 chr1 1276042 1276252 + 10.5 0.000 Intergenic MER4B|LTR|ERV1 -2293 NM_194457 118424 Hs.191987 NM_058167 ENSG00000160087 UBE2J2 NCUBE-2|NCUBE2|PRO2121 ubiquitin conjugating enzyme E2 J2 protein-coding chr6-2824 chr6 158850457 158850667 + 10.5 0.000 intron (NR_028496, intron 2 of 2) intron (NR_028496, intron 2 of 2) 7070 NR_028496 202459 Hs.487035 NM_145303 ENSG00000243775 OSTCP1 DC2L|OSTCL oligosaccharyltransferase complex subunit pseudogene 1 pseudo chr9-1761 chr9 132259212 132259422 + 10.5 0.000 Intergenic Intergenic 95539 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr17-7373 chr17 7640370 7640580 + 10.5 0.000 Intergenic L1MB3|LINE|L1 -6152 NM_001303263 482 Hs.643540 NM_001678 ENSG00000129244 ATP1B2 AMOG ATPase Na+/K+ transporting subunit beta 2 protein-coding chr12-4445 chr12 11688835 11689045 + 10.5 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 39086 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr1-4299 chr1 22796149 22796359 + 10.5 0.000 intron (NM_004442, intron 3 of 15) L2a|LINE|L2 66972 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr17-8682 chr17 82619260 82619470 + 10.5 0.000 intron (NM_019613, intron 6 of 9) intron (NM_019613, intron 6 of 9) 29079 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr14-4476 chr14 35427998 35428208 + 10.5 0.000 Intergenic Intergenic -23349 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr9-3584 chr9 76137012 76137222 + 10.5 0.000 intron (NM_006200, intron 10 of 20) intron (NM_006200, intron 10 of 20) 246444 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr9-3205 chr9 132843357 132843567 + 10.5 0.000 intron (NM_001317959, intron 6 of 14) MSTA|LTR|ERVL-MaLR -34882 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr11-3312 chr11 104177881 104178091 + 10.5 0.000 Intergenic L2a|LINE|L2 -13839 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr10-4844 chr10 14023846 14024056 + 10.5 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -15401 NM_001318336 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr3-4326 chr3 176864680 176864890 + 10.5 0.000 Intergenic L1PA5|LINE|L1 -47784 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr17-5750 chr17 59634611 59634821 + 10.5 0.000 intron (NM_001288653, intron 1 of 31) intron (NM_001288653, intron 1 of 31) 14821 NM_004859 1213 Hs.491351 NM_004859 ENSG00000141367 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc|MRD56 clathrin heavy chain protein-coding chr11-1817 chr11 12674417 12674627 + 10.5 0.000 5' UTR (NM_021961, exon 1 of 13) 5' UTR (NM_021961, exon 1 of 13) 101 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr1-3509 chr1 156804608 156804818 + 10.5 0.000 Intergenic Intergenic -11037 NM_001007792 4914 Hs.406293 NM_002529 ENSG00000198400 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic receptor tyrosine kinase 1 protein-coding chrX-2418 chrX 75404690 75404900 + 10.5 0.000 intron (NM_001146256, intron 9 of 10) L1PA14|LINE|L1 118242 NM_144969 158866 Hs.253211 NM_144969 ENSG00000102383 ZDHHC15 DHHC15|MRX91 zinc finger DHHC-type containing 15 protein-coding chr1-10352 chr1 154420165 154420375 + 10.5 0.000 intron (NM_001206866, intron 1 of 6) intron (NM_001206866, intron 1 of 6) -13706 NR_147855 101928101 Hs.617089 NR_147855 ENSG00000228013 IL6R-AS1 - IL6R antisense RNA 1 ncRNA chr18-1185 chr18 23838844 23839054 + 10.5 0.000 intron (NM_001127717, intron 26 of 73) intron (NM_001127717, intron 26 of 73) -34071 NM_001127718 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr1-5545 chr1 225877830 225878040 + 10.5 0.000 intron (NM_014698, intron 2 of 24) intron (NM_014698, intron 2 of 24) 4445 NM_014698 9725 Hs.119387 NM_014698 ENSG00000196187 TMEM63A KIAA0792 transmembrane protein 63A protein-coding chr11-2709 chr11 132055051 132055261 + 10.5 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 144338 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr6-2673 chr6 7787451 7787661 + 10.5 0.000 intron (NM_001718, intron 1 of 6) intron (NM_001718, intron 1 of 6) 61457 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr14-2064 chr14 68510355 68510565 + 10.5 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 118327 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr9-1736 chr9 126531963 126532173 + 10.5 0.000 Intergenic Plat_L3|LINE|CR1 -82375 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr4-3096 chr4 153159997 153160207 + 10.5 0.000 intron (NM_001130067, intron 1 of 11) intron (NM_001130067, intron 1 of 11) 7024 NM_001130067 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr1-12171 chr1 185011576 185011786 + 10.5 0.000 Intergenic Intergenic 10154 NR_146489 101929069 Hs.497170 NR_146489 ENSG00000260976 LINC01633 GS1-120K12.4 long intergenic non-protein coding RNA 1633 ncRNA chr19-1895 chr19 44996317 44996527 + 10.5 0.000 Intergenic Intergenic -5042 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr9-3632 chr9 91729280 91729490 + 10.5 0.000 intron (NM_001318204, intron 7 of 7) intron (NM_001318204, intron 7 of 7) -93040 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr19-6543 chr19 18877269 18877479 + 10.5 0.000 TTS (NM_001290265) TTS (NM_001290265) 18784 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr4-1990 chr4 793421 793631 + 10.5 0.000 intron (NM_006651, intron 2 of 3) intron (NM_006651, intron 2 of 3) -11678 NR_036511 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr3-10591 chr3 143261517 143261727 + 10.5 0.000 Intergenic Intergenic -80624 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr13-1046 chr13 98557320 98557530 + 10.5 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) 19726 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr19-7062 chr19 53963132 53963342 + 10.5 0.000 exon (NM_031895, exon 1 of 4) exon (NM_031895, exon 1 of 4) 300 NM_031895 59283 Hs.631595 NM_031895 ENSG00000142408 CACNG8 - calcium voltage-gated channel auxiliary subunit gamma 8 protein-coding chr1-9743 chr1 54248553 54248763 + 10.5 0.000 intron (NM_001009955, intron 8 of 16) intron (NM_001009955, intron 8 of 16) 12215 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr17-4802 chr17 49956438 49956648 + 10.5 0.000 Intergenic Intergenic -12647 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr3-4704 chr3 53619792 53620002 + 10.5 0.000 intron (NM_001128840, intron 3 of 47) L2a|LINE|L2 125286 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr12-5052 chr12 89349908 89350118 + 10.5 0.000 intron (NM_022652, intron 1 of 1) intron (NM_022652, intron 1 of 1) 2488 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr14-3305 chr14 85453995 85454205 + 10.5 0.000 Intergenic Intergenic 60185 NR_102738 100996280 Hs.135735 NR_102737 ENSG00000259107 LINC00911 - long intergenic non-protein coding RNA 911 ncRNA chr2-9862 chr2 188382325 188382535 + 10.5 0.000 intron (NR_045563, intron 2 of 12) LTR16C|LTR|ERVL 84938 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr1-5371 chr1 245143608 245143818 + 10.5 0.000 Intergenic Intergenic -11272 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr14-801 chr14 74612493 74612703 + 10.5 0.000 promoter-TSS (NM_000428) promoter-TSS (NM_000428) -361 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr3-5233 chr3 99118504 99118714 + 10.5 0.000 Intergenic Intergenic -216914 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr4-6902 chr4 14658499 14658709 + 10.5 0.000 intron (NR_126435, intron 3 of 6) intron (NR_126435, intron 3 of 6) 229565 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr5-4874 chr5 66281967 66282177 + 10.5 0.000 Intergenic MER102a|DNA|hAT-Charlie -72626 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA chr8-3563 chr8 128230946 128231156 + 10.5 0.000 Intergenic L2a|LINE|L2 80935 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr2-12119 chr2 35862974 35863184 + 10.5 0.000 Intergenic Intergenic 391674 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr17-5403 chr17 33687637 33687847 + 10.5 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -153982 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr13-1094 chr13 98443404 98443614 + 10.5 0.000 intron (NM_005766, intron 24 of 26) intron (NM_005766, intron 24 of 26) 78616 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr4-998 chr4 181647853 181648063 + 10.5 0.000 Intergenic X6A_LINE|LINE|CR1 182015 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr1-6337 chr1 5634020 5634230 + 10.5 0.000 Intergenic Intergenic 228616 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr1-14172 chr1 32791960 32792170 + 10.5 0.000 intron (NM_003680, intron 5 of 12) intron (NM_003680, intron 5 of 12) -25377 NM_001256121 64766 Hs.440880 NM_022753 ENSG00000116497 S100PBP S100PBPR S100P binding protein protein-coding chr5-2110 chr5 59095531 59095741 + 10.5 0.000 intron (NM_001364603, intron 5 of 15) intron (NM_001364603, intron 5 of 15) -56160 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr17-1774 chr17 40746019 40746229 + 10.5 0.000 Intergenic L2a|LINE|L2 9207 NM_181534 147183 Hs.55412 NM_181534 ENSG00000204897 KRT25 ARWH3|KRT24IRS1|KRT25A keratin 25 protein-coding chr10-1497 chr10 6208755 6208965 + 10.5 0.000 intron (NM_001314063, intron 1 of 15) MamRep605|LTR?|LTR? 5928 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr17-4947 chr17 78232643 78232853 + 10.5 0.000 intron (NM_001204212, intron 2 of 3) intron (NM_001204212, intron 2 of 3) 1438 NM_001204210 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr8-2380 chr8 47002310 47002520 + 10.5 0.000 Intergenic Intergenic 161529 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr19-1909 chr19 51726189 51726399 + 10.5 0.000 Intergenic Intergenic -2303 NM_001523 3036 Hs.57697 NM_001523 ENSG00000105509 HAS1 HAS hyaluronan synthase 1 protein-coding chr10-1909 chr10 124597789 124597999 + 10.5 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) -106134 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr19-1853 chr19 16063857 16064067 + 10.5 0.000 Intergenic AluJo|SINE|Alu -1725 NR_146442 105372292 Hs.635664 NR_146442 ENSG00000267517 LINC01855 - long intergenic non-protein coding RNA 1855 ncRNA chr2-5340 chr2 86071960 86072170 + 10.5 0.000 intron (NM_015425, intron 12 of 33) intron (NM_015425, intron 12 of 33) 33821 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr1-2637 chr1 150979489 150979699 + 10.5 0.000 Intergenic Intergenic -2698 NM_003568 8416 Hs.3346 NM_003568 ENSG00000143412 ANXA9 ANX31 annexin A9 protein-coding chr1-3335 chr1 27488293 27488503 + 10.5 0.000 intron (NM_006990, intron 1 of 8) intron (NM_006990, intron 1 of 8) 1769 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr12-1503 chr12 50283166 50283376 + 10.5 0.000 intron (NM_016357, intron 1 of 10) intron (NM_016357, intron 1 of 10) 249 NM_016357 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr2-3462 chr2 144938181 144938391 + 10.5 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 270319 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr5-3462 chr5 167803104 167803314 + 10.5 0.000 intron (NM_001080428, intron 1 of 24) intron (NM_001080428, intron 1 of 24) 48280 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr14-3101 chr14 64937261 64937471 + 10.5 0.000 intron (NM_001202559, intron 3 of 13) intron (NM_001202559, intron 3 of 13) 5379 NR_046321 2877 Hs.2704 NM_002083 ENSG00000176153 GPX2 GI-GPx|GPRP|GPRP-2|GPx-2|GPx-GI|GSHPX-GI|GSHPx-2 glutathione peroxidase 2 protein-coding chr3-6893 chr3 156057322 156057532 + 10.5 0.000 Intergenic LTR79|LTR|ERVL -63121 NM_001308217 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr1-6170 chr1 189901513 189901723 + 10.5 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 574392 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr10-2458 chr10 17835785 17835995 + 10.5 0.000 intron (NM_002438, intron 4 of 29) MER5A|DNA|hAT-Charlie -9217 NR_030167 574445 NR_030167 ENSG00000207938 MIR511 MIR511-1|MIR511-2|MIRN511-1|MIRN511-2|hsa-mir-511|hsa-mir-511-2|mir-511 microRNA 511 ncRNA chr11-2238 chr11 72561993 72562203 + 10.5 0.000 Intergenic Intergenic -8558 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr13-3145 chr13 92234148 92234358 + 10.5 0.000 intron (NM_004466, intron 7 of 7) L1PA4|LINE|L1 117954 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr3-5229 chr3 93841666 93841876 + 10.5 0.000 Intergenic Intergenic 132310 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr16-873 chr16 30096181 30096391 + 10.5 0.000 promoter-TSS (NM_001145524) promoter-TSS (NM_001145524) -73 NM_001145524 83719 Hs.513491 NM_031477 ENSG00000090238 YPEL3 - yippee like 3 protein-coding chr12-3548 chr12 259998 260208 + 10.5 0.000 intron (NM_001243392, intron 1 of 1) intron (NM_001243392, intron 1 of 1) 2733 NM_001243392 6540 Hs.504398 NM_016615 ENSG00000010379 SLC6A13 GAT-2|GAT2|GAT3 solute carrier family 6 member 13 protein-coding chrX-2888 chrX 148845927 148846137 + 10.5 0.000 intron (NM_001170628, intron 4 of 17) intron (NM_001170628, intron 4 of 17) 126941 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr3-2913 chr3 51805532 51805742 + 10.5 0.000 Intergenic Intergenic -11966 NR_038214 100506840 Hs.254808 NR_038213 ENSG00000224792 IQCF4 - IQ motif containing F5 pseudogene pseudo chr17-4843 chr17 60815576 60815786 + 10.5 0.000 intron (NM_001330413, intron 7 of 25) intron (NM_001330413, intron 7 of 25) 137830 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr14-3197 chr14 73068381 73068591 + 10.5 0.000 intron (NM_021239, intron 1 of 18) intron (NM_021239, intron 1 of 18) 9952 NM_021239 58517 Hs.531106 NM_021239 ENSG00000119707 RBM25 NET52|RED120|RNPC7|S164|Snu71|fSAP94 RNA binding motif protein 25 protein-coding chr19-3060 chr19 2448072 2448282 + 10.5 0.000 intron (NM_032737, intron 1 of 11) intron (NM_032737, intron 1 of 11) 8782 NM_032737 84823 Hs.538286 NM_032737 ENSG00000176619 LMNB2 EPM9|LAMB2|LMN2 lamin B2 protein-coding chr5-1566 chr5 126503911 126504121 + 10.5 0.000 Intergenic Intergenic 38866 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr6-5006 chr6 108948439 108948649 + 10.5 0.000 intron (NM_001286609, intron 11 of 16) intron (NM_001286609, intron 11 of 16) -24441 NR_104137 101929716 NR_104137 ARMC2-AS1 - ARMC2 antisense RNA 1 ncRNA chr19-2644 chr19 6229577 6229787 + 10.5 0.000 intron (NM_005934, intron 4 of 11) (AC)n|Simple_repeat|Simple_repeat 50293 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chrX-1251 chrX 100215266 100215476 + 10.5 0.000 Intergenic MIR|SINE|MIR 194902 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr15-1723 chr15 101116156 101116366 + 10.5 0.000 Intergenic Intergenic 135787 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr4-4790 chr4 102883836 102884046 + 10.5 0.000 intron (NM_001008388, intron 1 of 2) intron (NM_001008388, intron 1 of 2) 14949 NM_001008388 493856 Hs.444955 NM_001008388 ENSG00000145354 CISD2 ERIS|Miner1|NAF-1|WFS2|ZCD2 CDGSH iron sulfur domain 2 protein-coding chr3-6228 chr3 65538568 65538778 + 10.5 0.000 intron (NM_001365904, intron 2 of 24) intron (NM_001365904, intron 2 of 24) -355143 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chrX-467 chrX 154334554 154334764 + 10.5 0.000 Intergenic (CACACAC)n|Simple_repeat|Simple_repeat 29602 NM_001145934 8277 Hs.102866 NM_012253 ENSG00000007350 TKTL1 TKR|TKT2 transketolase like 1 protein-coding chr15-2325 chr15 84752662 84752872 + 10.5 0.000 intron (NM_014630, intron 1 of 10) MamRep605|LTR?|LTR? 4175 NM_014630 9640 Hs.79347 NM_014630 ENSG00000166716 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding chr11-2691 chr11 102178314 102178524 + 10.5 0.000 intron (NM_001282097, intron 3 of 7) intron (NM_001282097, intron 3 of 7) 65971 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr21-1894 chr21 44071525 44071735 + 10.5 0.000 intron (NM_003274, intron 7 of 22) intron (NM_003274, intron 7 of 22) -2694 NM_001351709 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr10-3621 chr10 95247385 95247595 + 10.5 0.000 intron (NM_020992, intron 4 of 6) intron (NM_020992, intron 4 of 6) 43513 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr17-2965 chr17 63507869 63508079 + 10.5 0.000 Intergenic Intergenic -15384 NM_001278920 81033 Hs.591177 NM_030779 ENSG00000173826 KCNH6 ERG-2|ERG2|HERG2|Kv11.2|hERG-2 potassium voltage-gated channel subfamily H member 6 protein-coding chr2-4408 chr2 96119971 96120181 + 10.5 0.000 Intergenic Intergenic -3505 NM_000682 151 Hs.247686 NM_000682 ENSG00000274286 ADRA2B ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR adrenoceptor alpha 2B protein-coding chr9-4733 chr9 129282647 129282857 + 10.5 0.000 intron (NR_121587, intron 1 of 2) intron (NR_121587, intron 1 of 2) 336 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr1-7730 chr1 30249987 30250197 + 10.5 0.000 Intergenic Intergenic -212480 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr2-11837 chr2 19543828 19544038 + 10.5 0.000 Intergenic MIRb|SINE|MIR -185310 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr8-3945 chr8 46685314 46685524 + 10.5 0.000 Intergenic L1MCc|LINE|L1 -67776 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr10-2666 chr10 96496387 96496597 + 10.5 0.000 intron (NM_012465, intron 1 of 20) intron (NM_012465, intron 1 of 20) 17434 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr18-2823 chr18 6009795 6010005 + 10.5 0.000 intron (NR_158609, intron 15 of 17) intron (NR_158609, intron 15 of 17) -113946 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr22-761 chr22 36180304 36180514 + 10.5 0.000 Intergenic LTR57-int|LTR|ERVL -14232 NM_145641 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr16-1069 chr16 28089504 28089714 + 10.5 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -25895 NM_001323900 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr4-3161 chr4 186552165 186552375 + 10.5 0.000 intron (NM_005958, intron 1 of 1) intron (NM_005958, intron 1 of 1) 3297 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr2-13388 chr2 138636109 138636319 + 10.5 0.000 Intergenic L2a|LINE|L2 134444 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chrX-835 chrX 113644538 113644748 + 10.5 0.000 intron (NR_131204, intron 1 of 2) L1MB8|LINE|L1 293575 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr3-1255 chr3 170357505 170357715 + 10.5 0.000 promoter-TSS (NM_005414) promoter-TSS (NM_005414) -105 NM_001145098 6498 Hs.536655 NM_005414 ENSG00000136603 SKIL SNO|SnoA|SnoI|SnoN SKI like proto-oncogene protein-coding chr11-5765 chr11 3837539 3837749 + 10.5 0.000 intron (NM_001665, intron 1 of 1) intron (NM_001665, intron 1 of 1) 3315 NM_001665 391 Hs.501728 NM_001665 ENSG00000177105 RHOG ARHG ras homolog family member G protein-coding chr1-3809 chr1 17722807 17723017 + 10.5 0.000 Intergenic L1M5|LINE|L1 -32421 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr7-6377 chr7 151346503 151346713 + 10.5 0.000 intron (NM_001363529, intron 2 of 14) MER21C|LTR|ERVL 4796 NM_001363529 51667 Hs.647082 NM_016118 ENSG00000013374 NUB1 BS4|NUB1L|NYREN18 negative regulator of ubiquitin like proteins 1 protein-coding chr19-3760 chr19 55305419 55305629 + 10.5 0.000 exon (NM_032430, exon 16 of 19) exon (NM_032430, exon 16 of 19) 19817 NM_001282011 284417 Hs.382625 NM_001085488 ENSG00000180061 TMEM150B DRAM3|TMEM224|TTN2 transmembrane protein 150B protein-coding chr9-5961 chr9 134039585 134039795 + 10.5 0.000 intron (NM_007371, intron 9 of 11) intron (NM_007371, intron 9 of 11) 14209 NM_001355256 266655 Hs.654869 NM_001355256 ENSG00000235106 BRD3OS LINC00094|LP2477|NCRNA00094 BRD3 opposite strand protein-coding chr2-5692 chr2 204721133 204721343 + 10.5 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 175763 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr18-1181 chr18 23642947 23643157 + 10.5 0.000 intron (NM_173505, intron 3 of 9) intron (NM_173505, intron 3 of 9) 19859 NM_173505 147463 Hs.355689 NM_173505 ENSG00000154065 ANKRD29 - ankyrin repeat domain 29 protein-coding chr1-3397 chr1 212622421 212622631 + 10.5 0.000 Intergenic Intergenic -1948 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding chr5-3329 chr5 132526790 132527000 + 10.5 0.000 Intergenic Intergenic 16627 NM_000879 3567 Hs.2247 NM_000879 ENSG00000113525 IL5 EDF|IL-5|TRF interleukin 5 protein-coding chr6-5632 chr6 63932850 63933060 + 10.5 0.000 intron (NM_001292009, intron 35 of 43) MER21B|LTR|ERVL 126119 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr22-2620 chr22 32661500 32661710 + 10.5 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -139211 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr14-857 chr14 24966148 24966358 + 10.5 0.000 intron (NM_001351943, intron 3 of 6) intron (NM_001351943, intron 3 of 6) 82747 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr12-5575 chr12 19530014 19530224 + 10.5 0.000 Intergenic Intergenic 89520 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr9-2707 chr9 87123121 87123331 + 10.5 0.000 Intergenic Intergenic -25418 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr1-2766 chr1 94854628 94854838 + 10.5 0.000 intron (NM_001258340, intron 9 of 14) MER20|DNA|hAT-Charlie 30240 NM_001350223 126969 Hs.483423 NM_152369 ENSG00000143036 SLC44A3 CTL3 solute carrier family 44 member 3 protein-coding chr12-3478 chr12 121668679 121668889 + 10.5 0.000 intron (NM_173855, intron 1 of 5) intron (NM_173855, intron 1 of 5) 870 NM_173855 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 - MORN repeat containing 3 protein-coding chr7-2597 chr7 138738880 138739090 + 10.5 0.000 intron (NM_130840, intron 14 of 20) intron (NM_130840, intron 14 of 20) 35052 NM_130841 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr19-3596 chr19 49502704 49502914 + 10.5 0.000 Intergenic MIRb|SINE|MIR -1941 NR_029703 406942 NR_029703 ENSG00000207782 MIR150 MIRN150|miRNA150|mir-150 microRNA 150 ncRNA chr21-918 chr21 32449395 32449605 + 10.5 0.000 intron (NM_001320744, intron 1 of 5) L1MC1|LINE|L1 36794 NM_001320744 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr1-4686 chr1 227298569 227298779 + 10.5 0.000 intron (NM_001366019, intron 1 of 36) intron (NM_001366019, intron 1 of 36) 19818 NM_001366010 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr7-6008 chr7 104814114 104814324 + 10.5 0.000 intron (NM_199000, intron 2 of 2) MER52A|LTR|ERV1 -10127 NR_034141 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr16-3208 chr16 85263762 85263972 + 10.5 0.000 Intergenic AluSx|SINE|Alu -19091 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr2-2391 chr2 9666015 9666225 + 10.5 0.000 Intergenic Intergenic -35123 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr11-5394 chr11 66305304 66305514 + 10.5 0.000 Intergenic Intergenic 11635 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding chr17-5376 chr17 31417550 31417760 + 10.5 0.000 intron (NM_032932, intron 1 of 14) MER102c|DNA|hAT-Charlie 25980 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr11-8999 chr11 23903119 23903329 + 10.5 0.000 Intergenic Intergenic -484034 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr22-2277 chr22 33051672 33051882 + 10.5 0.000 intron (NM_003490, intron 1 of 13) intron (NM_003490, intron 1 of 13) 767 NM_001369908 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr11-5902 chr11 12927321 12927531 + 10.5 0.000 intron (NM_021961, intron 11 of 12) L1M5|LINE|L1 62122 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr22-1187 chr22 46419153 46419363 + 10.5 0.000 intron (NM_014246, intron 5 of 34) intron (NM_014246, intron 5 of 34) 83544 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr10-3670 chr10 102236122 102236332 + 10.5 0.000 intron (NM_005029, intron 1 of 3) intron (NM_005029, intron 1 of 3) 5285 NM_005029 5309 Hs.137568 NM_005029 ENSG00000107859 PITX3 ASGD1|ASMD|ASOD|CTPP4|CTRCT11|PTX3 paired like homeodomain 3 protein-coding chr1-16615 chr1 238658891 238659101 + 10.5 0.000 Intergenic MER4D|LTR|ERV1 -172979 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr8-4370 chr8 102006767 102006977 + 10.5 0.000 intron (NM_001040624, intron 3 of 7) LTR33|LTR|ERVL 22440 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr4-2088 chr4 35078881 35079091 + 10.5 0.000 Intergenic LTR2752|LTR|ERV1 -809239 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr5-4571 chr5 23670615 23670825 + 10.5 0.000 Intergenic Intergenic 163065 NM_001310214 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding chr16-2298 chr16 11725811 11726021 + 10.5 0.000 intron (NR_136673, intron 3 of 9) AluJr4|SINE|Alu 16941 NM_001324022 51061 Hs.313847 NM_015914 ENSG00000153066 TXNDC11 EFP1 thioredoxin domain containing 11 protein-coding chr9-2624 chr9 18217180 18217390 + 10.5 0.000 Intergenic MIRc|SINE|MIR -256868 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr9-6991 chr9 112249494 112249704 + 10.5 0.000 intron (NM_001244896, intron 6 of 12) intron (NM_001244896, intron 6 of 12) -74302 NM_022486 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr4-2139 chr4 77095826 77096036 + 10.5 0.000 Intergenic Intergenic -19942 NM_006835 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr5-5686 chr5 161079128 161079338 + 10.5 0.000 Intergenic Intergenic -140607 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr9-2256 chr9 90115869 90116079 + 10.5 0.000 Intergenic Intergenic -74475 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr2-4899 chr2 133727122 133727332 + 10.5 0.000 Intergenic Intergenic -158764 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr2-12044 chr2 30135849 30136059 + 10.5 0.000 Intergenic Intergenic -11053 NM_016061 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr16-1448 chr16 71894446 71894656 + 10.5 0.000 promoter-TSS (NM_001270977) promoter-TSS (NM_001270977) 143 NM_001270976 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr7-2369 chr7 22718149 22718359 + 10.5 0.000 Intergenic Intergenic -8946 NM_001318095 3569 Hs.654458 NM_000600 ENSG00000136244 IL6 BSF-2|BSF2|CDF|HGF|HSF|IFN-beta-2|IFNB2|IL-6 interleukin 6 protein-coding chr8-1103 chr8 48554798 48555008 + 10.5 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 3336 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr6-3997 chr6 115986405 115986615 + 10.5 0.000 intron (NM_002031, intron 2 of 7) MIR3|SINE|MIR -52221 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo chr2-11834 chr2 19098545 19098755 + 10.5 0.000 Intergenic Intergenic -71679 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr4-1827 chr4 88010965 88011175 + 10.5 0.000 intron (NR_156488, intron 1 of 13) intron (NR_156488, intron 1 of 13) 3435 NM_000297 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr14-1766 chr14 89631184 89631394 + 10.5 0.000 Intergenic Intergenic -12124 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr2-5630 chr2 190089965 190090175 + 10.5 0.000 Intergenic Intergenic -27341 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr2-3416 chr2 56377300 56377510 + 10.5 0.000 intron (NM_001080433, intron 5 of 5) intron (NM_001080433, intron 5 of 5) -191635 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr6-3247 chr6 146642295 146642505 + 10.5 0.000 intron (NM_024694, intron 2 of 35) L1PA14|LINE|L1 43428 NM_024694 79747 Hs.720870 NM_024694 ENSG00000118492 ADGB C6orf103|CAPN16 androglobin protein-coding chr5-4363 chr5 170536981 170537191 + 10.5 0.000 intron (NM_001278339, intron 1 of 7) intron (NM_001278339, intron 1 of 7) 33066 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr6-1643 chr6 130426236 130426446 + 10.5 0.000 intron (NM_001258278, intron 1 of 1) intron (NM_001258278, intron 1 of 1) 5245 NM_001258278 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr9-6365 chr9 19375740 19375950 + 10.5 0.000 3' UTR (NM_001010, exon 6 of 6) 3' UTR (NM_001010, exon 6 of 6) 4391 NM_001010 6194 Hs.408073 NM_001010 ENSG00000137154 RPS6 S6 ribosomal protein S6 protein-coding chr1-6036 chr1 71505886 71506096 + 10.5 0.000 intron (NM_173808, intron 6 of 6) HERVP71A-int|LTR|ERV1 331021 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr17-4765 chr17 43884665 43884875 + 10.5 0.000 intron (NM_001278372, intron 3 of 13) L1MC4|LINE|L1 15854 NM_001278376 4355 Hs.514208 NM_005374 ENSG00000108852 MPP2 DLG2 membrane palmitoylated protein 2 protein-coding chr9-3691 chr9 104836386 104836596 + 10.5 0.000 intron (NM_005502, intron 11 of 49) intron (NM_005502, intron 11 of 49) 72362 NR_130760 55335 Hs.429294 NM_018376 ENSG00000165028 NIPSNAP3B FP944|NIPSNAP3|SNAP1 nipsnap homolog 3B protein-coding chr2-3894 chr2 44348495 44348705 + 10.5 0.000 intron (NM_001171617, intron 1 of 13) intron (NM_001171617, intron 1 of 13) 11149 NM_001042385 9581 Hs.444349 NM_006036 ENSG00000138078 PREPL CMS22 prolyl endopeptidase like protein-coding chr10-9168 chr10 129725343 129725553 + 10.5 0.000 intron (NM_002412, intron 3 of 4) intron (NM_002412, intron 3 of 4) 117926 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr10-1556 chr10 121598511 121598721 + 10.5 0.000 promoter-TSS (NM_000141) promoter-TSS (NM_000141) -158 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr15-1185 chr15 38254285 38254495 + 10.5 0.000 intron (NM_152594, intron 1 of 6) intron (NM_152594, intron 1 of 6) 1554 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr10-6745 chr10 132433560 132433770 + 10.5 0.000 Intergenic Intergenic -11524 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr1-5644 chr1 25805921 25806131 + 10.5 0.000 intron (NM_020451, intron 4 of 12) L2b|LINE|L2 5833 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr9-4988 chr9 20851922 20852132 + 10.5 0.000 intron (NM_017794, intron 17 of 45) intron (NM_017794, intron 17 of 45) 65100 NR_145762 109616992 NR_145762 ENSG00000202189 SNORA30B - small nucleolar RNA, H/ACA box 30B snoRNA chr2-6388 chr2 119016247 119016457 + 10.5 0.000 Intergenic L1ME4b|LINE|L1 74183 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding chr1-11974 chr1 83214416 83214626 + 10.5 0.000 Intergenic Intergenic -228313 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chr8-1965 chr8 63081681 63081891 + 10.5 0.000 intron (NM_000370, intron 1 of 4) L1PA6|LINE|L1 4267 NM_000370 7274 Hs.69049 NM_000370 ENSG00000137561 TTPA ATTP|AVED|TTP1|alphaTTP alpha tocopherol transfer protein protein-coding chr9-4290 chr9 115786275 115786485 + 10.5 0.000 Intergenic Intergenic -42141 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr3-10542 chr3 140036608 140036818 + 10.5 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 101528 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr9-3128 chr9 87581269 87581479 + 10.5 0.000 intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) 27920 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr7-1877 chr7 81035923 81036133 + 10.5 0.000 Intergenic Intergenic -113639 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr19-4716 chr19 19022570 19022780 + 10.4 0.000 intron (NR_147915, intron 3 of 11) intron (NR_147915, intron 3 of 11) 10842 NR_147913 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr12-2626 chr12 127214352 127214562 + 10.4 0.000 Intergenic Intergenic 69826 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr12-7546 chr12 71018947 71019157 + 10.4 0.000 Intergenic Intergenic -98314 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr6-4050 chr6 132974455 132974665 + 10.4 0.000 Intergenic Intergenic -113520 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr2-6255 chr2 42968106 42968316 + 10.4 0.000 Intergenic Intergenic 71332 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr9-5842 chr9 130252369 130252579 + 10.4 0.000 Intergenic LTR103b_Mam|LTR|ERV1? 11087 NR_162140 113219459 NR_162140 MIR12126 - microRNA 12126 ncRNA chr19-1381 chr19 5043837 5044047 + 10.4 0.000 intron (NM_001370094, intron 5 of 10) CpG 74829 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr3-2134 chr3 111811028 111811238 + 10.4 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) -48047 NM_145753 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr9-2207 chr9 135622734 135622944 + 10.4 0.000 TTS (NM_182974) TTS (NM_182974) 16701 NM_182974 360203 Hs.522491 NM_182974 ENSG00000204007 GLT6D1 GLTDC1|GT6M7 glycosyltransferase 6 domain containing 1 protein-coding chr15-1300 chr15 43998737 43998947 + 10.4 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) -120671 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr9-4535 chr9 76181550 76181760 + 10.4 0.000 intron (NR_120409, intron 15 of 19) intron (NR_120409, intron 15 of 19) 212771 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr22-1398 chr22 38383489 38383699 + 10.4 0.000 intron (NR_002821, intron 1 of 4) intron (NR_002821, intron 1 of 4) 15321 NM_001289912 102800317 Hs.720223 NM_001289912 ENSG00000283900 TPTEP2-CSNK1E LOC400927-CSNK1E TPTEP2-CSNK1E readthrough protein-coding chr15-3006 chr15 55620405 55620615 + 10.4 0.000 intron (NM_173814, intron 19 of 19) intron (NM_173814, intron 19 of 19) -31539 NM_015617 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr1-8366 chr1 63909622 63909832 + 10.4 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 135710 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr15-1533 chr15 62978602 62978812 + 10.4 0.000 Intergenic Intergenic -64040 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr15-2720 chr15 93600879 93601089 + 10.4 0.000 Intergenic AluSx1|SINE|Alu -255576 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr9-5471 chr9 99474268 99474478 + 10.4 0.000 Intergenic Intergenic -99116 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr13-975 chr13 28401674 28401884 + 10.4 0.000 intron (NM_001160031, intron 11 of 11) intron (NM_001160031, intron 11 of 11) 93349 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr5-3082 chr5 37786947 37787157 + 10.4 0.000 Intergenic Intergenic 47770 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr22-1417 chr22 41933403 41933613 + 10.4 0.000 Intergenic Intergenic -6691 NM_052945 115650 Hs.344088 NM_052945 ENSG00000159958 TNFRSF13C BAFF-R|BAFFR|BROMIX|CD268|CVID4|prolixin TNF receptor superfamily member 13C protein-coding chr19-4693 chr19 18363273 18363483 + 10.4 0.000 intron (NM_001329471, intron 4 of 4) intron (NM_001329471, intron 4 of 4) 22780 NM_001329471 54858 Hs.131776 NM_017712 ENSG00000130517 PGPEP1 PAP-I|PGI|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding chr19-2019 chr19 50517403 50517613 + 10.4 0.000 3' UTR (NM_001348568, exon 3 of 3) 3' UTR (NM_001348568, exon 3 of 3) -2824 NM_001024656 554235 Hs.436338 NM_001024656 ENSG00000204653 ASPDH - aspartate dehydrogenase domain containing protein-coding chr10-5139 chr10 51733205 51733415 + 10.4 0.000 intron (NM_001098512, intron 3 of 17) intron (NM_001098512, intron 3 of 17) -33715 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr9-6843 chr9 70378761 70378971 + 10.4 0.000 Intergenic L1ME4a|LINE|L1 35791 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr14-1589 chr14 90496522 90496732 + 10.4 0.000 Intergenic (CCT)n|Simple_repeat|Simple_repeat 20582 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr3-3986 chr3 54613420 54613630 + 10.4 0.000 intron (NM_018398, intron 9 of 37) intron (NM_018398, intron 9 of 37) 26332 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr4-1474 chr4 3815063 3815273 + 10.4 0.000 Intergenic (ACTCT)n|Simple_repeat|Simple_repeat 48783 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr7-4596 chr7 17866152 17866362 + 10.4 0.000 intron (NM_001350862, intron 9 of 25) L1MA4|LINE|L1 74237 NR_146933 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding chr8-2869 chr8 139514438 139514648 + 10.4 0.000 Intergenic Intergenic 188580 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr11-7902 chr11 128599918 128600128 + 10.4 0.000 Intergenic Intergenic -12465 NM_001143820 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr17-1501 chr17 39209800 39210010 + 10.4 0.000 TTS (NM_198993) TTS (NM_198993) 9582 NM_001330200 6143 Hs.381061 NM_000981 ENSG00000108298 RPL19 L19 ribosomal protein L19 protein-coding chr9-2697 chr9 81619638 81619848 + 10.4 0.000 intron (NM_005077, intron 9 of 19) intron (NM_005077, intron 9 of 19) 69792 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr3-3820 chr3 23490576 23490786 + 10.4 0.000 intron (NM_001370225, intron 3 of 5) intron (NM_001370225, intron 3 of 5) 287354 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr9-4538 chr9 77906955 77907165 + 10.4 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 124751 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr17-4168 chr17 2179967 2180177 + 10.4 0.000 intron (NM_001256827, intron 5 of 11) intron (NM_001256827, intron 5 of 11) -52606 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr11-5519 chr11 86394855 86395065 + 10.4 0.000 intron (NM_001156474, intron 4 of 14) intron (NM_001156474, intron 4 of 14) 20073 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr6-1133 chr6 151325499 151325709 + 10.4 0.000 promoter-TSS (NM_144497) promoter-TSS (NM_144497) 73 NM_144497 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr6-3463 chr6 170549973 170550183 + 10.4 0.000 intron (NM_002793, intron 1 of 5) intron (NM_002793, intron 1 of 5) 3229 NM_002793 5689 Hs.352768 NM_002793 ENSG00000008018 PSMB1 HC5|PMSB1|PSC5 proteasome subunit beta 1 protein-coding chr6-4076 chr6 141159161 141159371 + 10.4 0.000 Intergenic MER4D|LTR|ERV1 475452 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr20-1408 chr20 32162715 32162925 + 10.4 0.000 intron (NM_001363731, intron 17 of 17) MLT1K|LTR|ERVL-MaLR 27540 NR_002781 128854 Hs.647447 NR_002781 ENSG00000235217 TSPY26P TSPYL3|bA392M18.1 testis specific protein Y-linked 26, pseudogene pseudo chr2-8192 chr2 88450702 88450912 + 10.4 0.000 intron (NM_001135649, intron 1 of 1) MER33|DNA|hAT-Charlie 1886 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr18-1450 chr18 44008812 44009022 + 10.4 0.000 Intergenic LOR1b|LTR|ERV1 522780 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr6-4636 chr6 47633225 47633435 + 10.4 0.000 Intergenic Intergenic -23142 NM_001368115 222611 Hs.724860 NM_153839 ENSG00000164393 ADGRF2 GPR111|PGR20|hGPCR35 adhesion G protein-coupled receptor F2 protein-coding chr12-5096 chr12 94783744 94783954 + 10.4 0.000 Intergenic Intergenic -50549 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr7-4394 chr7 93622086 93622296 + 10.4 0.000 Intergenic MER20|DNA|hAT-Charlie -47461 NM_001164737 799 Hs.489127 NM_001742 ENSG00000004948 CALCR CRT|CT-R|CTR|CTR1 calcitonin receptor protein-coding chr8-3423 chr8 73305581 73305791 + 10.4 0.000 intron (NM_172037, intron 2 of 5) intron (NM_172037, intron 2 of 5) 11084 NM_172037 157506 Hs.244940 NM_172037 ENSG00000121039 RDH10 SDR16C4 retinol dehydrogenase 10 protein-coding chr15-1477 chr15 36370858 36371068 + 10.4 0.000 Intergenic Intergenic -208663 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr4-3275 chr4 126604347 126604557 + 10.4 0.000 Intergenic Intergenic -1028505 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr18-1200 chr18 31531823 31532033 + 10.4 0.000 intron (NM_001943, intron 9 of 14) intron (NM_001943, intron 9 of 14) 24983 NR_045216 100652770 Hs.562766 NR_045216 ENSG00000264859 DSG2-AS1 - DSG2 antisense RNA 1 ncRNA chr2-11676 chr2 7573034 7573244 + 10.4 0.000 Intergenic Intergenic 151878 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr6-1518 chr6 15245359 15245569 + 10.4 0.000 promoter-TSS (NM_004973) promoter-TSS (NM_004973) -605 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr6-2931 chr6 24451929 24452139 + 10.4 0.000 intron (NM_001503, intron 14 of 24) intron (NM_001503, intron 14 of 24) 37544 NM_001503 2822 Hs.533291 NM_001503 ENSG00000112293 GPLD1 GPIPLD|GPIPLDM|PIGPLD|PIGPLD1|PLD glycosylphosphatidylinositol specific phospholipase D1 protein-coding chr3-6177 chr3 59785207 59785417 + 10.4 0.000 intron (NM_001354590, intron 7 of 8) MER113|DNA|hAT-Charlie -126815 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr5-4129 chr5 82873640 82873850 + 10.4 0.000 Intergenic Intergenic -13909 NR_105016 102546175 NR_105016 ENSG00000281327 LINC01338 - long intergenic non-protein coding RNA 1338 ncRNA chr19-3464 chr19 33265842 33266052 + 10.4 0.000 Intergenic AluJr|SINE|Alu 36587 NM_001287424 1050 Hs.76171 NM_004364 ENSG00000245848 CEBPA C/EBP-alpha|CEBP CCAAT enhancer binding protein alpha protein-coding chr11-6693 chr11 77491670 77491880 + 10.4 0.000 Intergenic L1M1|LINE|L1 -17712 NM_001128620 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr12-3277 chr12 69266334 69266544 + 10.4 0.000 intron (NM_007007, intron 9 of 9) intron (NM_007007, intron 9 of 9) 6779 NR_031692 100302182 NR_031692 ENSG00000283476 MIR1279 MIRN1279|hsa-mir-1279 microRNA 1279 ncRNA chr16-4262 chr16 23378652 23378862 + 10.4 0.000 exon (NM_000336, exon 11 of 13) exon (NM_000336, exon 11 of 13) 74432 NM_153603 91949 Hs.185807 NM_153603 ENSG00000168434 COG7 CDG2E component of oligomeric golgi complex 7 protein-coding chr15-1228 chr15 66646382 66646592 + 10.4 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) -55749 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr2-6145 chr2 233565921 233566131 + 10.4 0.000 promoter-TSS (NM_018218) promoter-TSS (NM_018218) -453 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr5-8803 chr5 149618438 149618648 + 10.4 0.000 intron (NM_001001669, intron 6 of 12) intron (NM_001001669, intron 6 of 12) 37045 NM_001001669 389337 Hs.256206 NM_001001669 ENSG00000183111 ARHGEF37 - Rho guanine nucleotide exchange factor 37 protein-coding chr22-1559 chr22 38294027 38294237 + 10.4 0.000 exon (NM_152221, exon 9 of 11) exon (NM_152221, exon 9 of 11) -21122 NM_001195072 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr8-3517 chr8 117335212 117335422 + 10.4 0.000 Intergenic MIRb|SINE|MIR -185396 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr3-8153 chr3 32056946 32057156 + 10.4 0.000 Intergenic MER41B|LTR|ERV1 -49460 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chr20-2810 chr20 57564214 57564424 + 10.4 0.000 exon (NM_002591, exon 7 of 10) exon (NM_002591, exon 7 of 10) 3209 NM_002591 5105 Hs.1872 NM_002591 ENSG00000124253 PCK1 PCKDC|PEPCK-C|PEPCK1|PEPCKC phosphoenolpyruvate carboxykinase 1 protein-coding chr8-6900 chr8 101642495 101642705 + 10.4 0.000 intron (NM_024915, intron 12 of 15) intron (NM_024915, intron 12 of 15) 148369 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr7-2342 chr7 1436601 1436811 + 10.4 0.000 intron (NM_182924, intron 15 of 16) intron (NM_182924, intron 15 of 16) 22764 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr13-2464 chr13 50169127 50169337 + 10.4 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) -2786 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr11-5238 chr11 24142689 24142899 + 10.4 0.000 Intergenic Intergenic -354259 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr19-2930 chr19 3483003 3483213 + 10.4 0.000 Intergenic CpG -2583 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr22-2703 chr22 37719767 37719977 + 10.4 0.000 intron (NM_001039141, intron 6 of 23) L2|LINE|L2 22824 NM_001039141 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr7-4312 chr7 31375411 31375621 + 10.4 0.000 Intergenic Intergenic -34790 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr5-3153 chr5 67642322 67642532 + 10.4 0.000 intron (NR_147169, intron 1 of 2) intron (NR_147169, intron 1 of 2) 4362 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr4-1388 chr4 140427672 140427882 + 10.4 0.000 promoter-TSS (NM_004362) promoter-TSS (NM_004362) -116 NM_001130675 1047 Hs.86368 NM_004362 ENSG00000153132 CLGN - calmegin protein-coding chr10-4422 chr10 67272733 67272943 + 10.4 0.000 intron (NM_001127384, intron 5 of 17) intron (NM_001127384, intron 5 of 17) 130572 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr15-1924 chr15 87227795 87228005 + 10.4 0.000 Intergenic Intergenic -239474 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA chr7-4658 chr7 32984694 32984904 + 10.4 0.000 intron (NM_007270, intron 5 of 9) L1MC5|LINE|L1 5325 NM_001284343 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr11-10143 chr11 90823893 90824103 + 10.4 0.000 intron (NR_104190, intron 4 of 6) L2c|LINE|L2 45204 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr14-2138 chr14 78612908 78613118 + 10.4 0.000 intron (NM_004796, intron 1 of 16) MIR3|SINE|MIR 209294 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr1-5845 chr1 244030537 244030747 + 10.4 0.000 intron (NR_033883, intron 8 of 11) intron (NR_033883, intron 8 of 11) -18297 NM_001278196 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr4-2494 chr4 14184438 14184648 + 10.4 0.000 Intergenic Intergenic 72575 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr11-1716 chr11 77218151 77218361 + 10.4 0.000 intron (NM_182833, intron 16 of 16) L1M5|LINE|L1 83410 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr10-4417 chr10 63093704 63093914 + 10.4 0.000 Intergenic FAM|SINE|Alu -39438 NM_001282405 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr1-8845 chr1 3298034 3298244 + 10.4 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -156526 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr16-3814 chr16 52910767 52910977 + 10.4 0.000 Intergenic L2a|LINE|L2 142001 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chrX-4959 chrX 113096770 113096980 + 10.4 0.000 intron (NR_110399, intron 2 of 3) L1MA5|LINE|L1 54148 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr15-2900 chr15 42999224 42999434 + 10.4 0.000 intron (NM_174916, intron 32 of 46) L2a|LINE|L2 -78551 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr3-8443 chr3 118409890 118410100 + 10.4 0.000 Intergenic L1MB2|LINE|L1 -231773 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr19-4980 chr19 45874630 45874840 + 10.4 0.000 TTS (NM_004497) TTS (NM_004497) 10409 NM_004497 3171 Hs.36137 NM_004497 ENSG00000170608 FOXA3 FKHH3|HNF3G|TCF3G forkhead box A3 protein-coding chr17-3128 chr17 34641094 34641304 + 10.4 0.000 Intergenic Intergenic 60450 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr5-2351 chr5 76116776 76116986 + 10.4 0.000 intron (NM_014979, intron 1 of 12) intron (NM_014979, intron 1 of 12) 33498 NM_014979 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr19-3830 chr19 11468168 11468378 + 10.4 0.000 intron (NM_032281, intron 1 of 6) intron (NM_032281, intron 1 of 6) 12773 NM_001420 1995 Hs.1701 NM_001420 ENSG00000196361 ELAVL3 HUC|HUCL|PLE21 ELAV like RNA binding protein 3 protein-coding chr11-4643 chr11 33670820 33671030 + 10.4 0.000 3' UTR (NM_012194, exon 21 of 21) 3' UTR (NM_012194, exon 21 of 21) 29815 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr6-4896 chr6 92001566 92001776 + 10.4 0.000 Intergenic MSTA|LTR|ERVL-MaLR -311243 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr17-2328 chr17 50292461 50292671 + 10.4 0.000 Intergenic Intergenic -4711 NR_125805 103752589 Hs.612913 NR_125805 ENSG00000251179 TMEM92-AS1 TCONS_00025237|lncRNA-508851 TMEM92 antisense RNA 1 ncRNA chr2-9865 chr2 190359349 190359559 + 10.4 0.000 intron (NM_001128928, intron 2 of 6) AluY|SINE|Alu 15865 NM_001128928 3628 Hs.32309 NM_002194 ENSG00000151689 INPP1 - inositol polyphosphate-1-phosphatase protein-coding chr22-1425 chr22 43908848 43909058 + 10.4 0.000 Intergenic Intergenic -14852 NM_025225 80339 Hs.654800 NM_025225 ENSG00000100344 PNPLA3 ADPN|C22orf20|iPLA(2)epsilon patatin like phospholipase domain containing 3 protein-coding chr8-3850 chr8 31968594 31968804 + 10.4 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -57037 NR_104158 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr10-8223 chr10 73506470 73506680 + 10.4 0.000 non-coding (NR_132103, exon 5 of 5) non-coding (NR_132103, exon 5 of 5) -10551 NM_001142353 5532 Hs.500067 NM_021132 ENSG00000107758 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3 catalytic subunit beta protein-coding chr5-1906 chr5 160479995 160480205 + 10.4 0.000 intron (NR_132748, intron 1 of 1) intron (NR_132748, intron 1 of 1) -5252 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr3-3360 chr3 37590500 37590710 + 10.4 0.000 intron (NM_002207, intron 15 of 27) intron (NM_002207, intron 15 of 27) 138464 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr17-5995 chr17 77708909 77709119 + 10.4 0.000 Intergenic Intergenic 19545 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr8-2313 chr8 142799000 142799210 + 10.4 0.000 Intergenic Intergenic -12566 NM_003695 8581 Hs.415762 NM_003695 ENSG00000167656 LY6D E48|Ly-6D lymphocyte antigen 6 family member D protein-coding chr9-2649 chr9 34125881 34126091 + 10.4 0.000 intron (NM_015397, intron 1 of 8) intron (NM_015397, intron 1 of 8) 712 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr13-2596 chr13 73622971 73623181 + 10.4 0.000 Intergenic L1ME3G|LINE|L1 58832 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr8-3002 chr8 109941338 109941548 + 10.4 0.000 Intergenic HERVL-int|LTR|ERVL 34328 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr10-4623 chr10 119790282 119790492 + 10.4 0.000 intron (NM_014937, intron 3 of 19) intron (NM_014937, intron 3 of 19) -28870 NM_001243194 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr2-9116 chr2 207055287 207055497 + 10.4 0.000 Intergenic Intergenic 54681 NR_036227 100423036 NR_036227 ENSG00000253008 MIR2355 mir-2355 microRNA 2355 ncRNA chr2-14244 chr2 211867894 211868104 + 10.4 0.000 intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 558361 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr8-1247 chr8 127949671 127949881 + 10.4 0.000 intron (NR_003367, intron 3 of 8) intron (NR_003367, intron 3 of 8) -1053 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr20-880 chr20 20466564 20466774 + 10.4 0.000 intron (NM_020343, intron 37 of 39) L3|LINE|CR1 98565 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr1-9832 chr1 62105466 62105676 + 10.4 0.000 intron (NM_001350145, intron 33 of 43) intron (NM_001350145, intron 33 of 43) -26715 NR_036059 100422946 NR_036059 ENSG00000283690 MIR3116-2 - microRNA 3116-2 ncRNA chr9-3123 chr9 78574527 78574737 + 10.4 0.000 Intergenic Intergenic 277507 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr9-2576 chr9 135801448 135801658 + 10.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 99368 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr17-3758 chr17 31371816 31372026 + 10.4 0.000 intron (NM_001042492, intron 57 of 57) intron (NM_001042492, intron 57 of 57) -19754 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chrX-5364 chrX 150018988 150019198 + 10.4 0.000 Intergenic Intergenic 80545 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr17-5061 chr17 3292112 3292322 + 10.4 0.000 exon (NM_002550, exon 1 of 1) exon (NM_002550, exon 1 of 1) 365 NM_002550 4994 Hs.647410 NM_002550 ENSG00000180090 OR3A1 OLFRA03|OR17-40|OR17-82|OR40 olfactory receptor family 3 subfamily A member 1 protein-coding chr6-4756 chr6 71537774 71537984 + 10.4 0.000 Intergenic Intergenic 116852 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr20-1139 chr20 41050385 41050595 + 10.4 0.000 intron (NM_003286, intron 2 of 20) intron (NM_003286, intron 2 of 20) 21668 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr7-4089 chr7 29382775 29382985 + 10.4 0.000 intron (NM_001293072, intron 3 of 12) intron (NM_001293072, intron 3 of 12) -96832 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr6-3058 chr6 70834777 70834987 + 10.4 0.000 intron (NM_001044305, intron 6 of 10) intron (NM_001044305, intron 6 of 10) 122178 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr8-2184 chr8 117621121 117621331 + 10.4 0.000 Intergenic AluJr|SINE|Alu 100513 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr2-14778 chr2 240580195 240580405 + 10.4 0.000 3' UTR (NM_018226, exon 11 of 11) 3' UTR (NM_018226, exon 11 of 11) 6016 NR_103792 101752400 Hs.585987 NR_103792 ENSG00000260942 CAPN10-DT CAPN10-AS1|locus959 CAPN10 divergent transcript ncRNA chr10-3452 chr10 50283081 50283291 + 10.4 0.000 Intergenic L2a|LINE|L2 -34576 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr7-1846 chr7 151660729 151660939 + 10.4 0.000 intron (NM_016203, intron 4 of 15) intron (NM_016203, intron 4 of 15) -28216 NM_001304531 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr1-6987 chr1 165388033 165388243 + 10.4 0.000 Intergenic Intergenic -31423 NM_177398 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr5-2197 chr5 150700711 150700921 + 10.4 0.000 intron (NM_018047, intron 1 of 10) CpG 246 NM_018047 55696 Hs.713564 NM_018047 ENSG00000086589 RBM22 Cwc2|ZC3H16|fSAP47 RNA binding motif protein 22 protein-coding chr2-3478 chr2 179272630 179272840 + 10.4 0.000 Intergenic Intergenic -7903 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr7-4396 chr7 94021194 94021404 + 10.4 0.000 Intergenic L1ME3G|LINE|L1 -16944 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr16-5337 chr16 82423400 82423610 + 10.4 0.000 Intergenic Intergenic -203464 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr6-3963 chr6 101722979 101723189 + 10.4 0.000 intron (NM_001166247, intron 6 of 16) MamSINE1|SINE|tRNA-RTE 324099 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr1-8223 chr1 26961193 26961403 + 10.4 0.000 promoter-TSS (NM_152365) promoter-TSS (NM_152365) -830 NM_152365 126695 Hs.188881 NM_152365 ENSG00000175707 KDF1 C1orf172|ECTD12 keratinocyte differentiation factor 1 protein-coding chr13-1532 chr13 26186368 26186578 + 10.4 0.000 intron (NM_183045, intron 5 of 5) CpG 35284 NM_183044 6049 Hs.136885 NM_005977 ENSG00000127870 RNF6 - ring finger protein 6 protein-coding chr16-4150 chr16 4769499 4769709 + 10.4 0.000 Intergenic L2b|LINE|L2 -2442 NM_001303450 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr3-6300 chr3 74796686 74796896 + 10.4 0.000 Intergenic L1PA6|LINE|L1 -275651 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr7-6185 chr7 129155170 129155380 + 10.4 0.000 intron (NM_178562, intron 1 of 7) L1MA4|LINE|L1 10568 NM_178562 340348 Hs.27267 NM_178562 ENSG00000158457 TSPAN33 PEN|PEN.|TSPAN-33 tetraspanin 33 protein-coding chr6-2930 chr6 24307874 24308084 + 10.4 0.000 intron (NM_016356, intron 2 of 9) L1MEc|LINE|L1 -48924 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr9-7411 chr9 21419012 21419222 + 10.4 0.000 Intergenic Intergenic 10000 NM_002170 3445 Hs.73890 NM_002170 ENSG00000120242 IFNA8 IFN-alphaB interferon alpha 8 protein-coding chr13-4097 chr13 78414864 78415074 + 10.4 0.000 intron (NR_047001, intron 3 of 5) L1MB1|LINE|L1 -181153 NR_158457 780529 Hs.587755 NR_158457 LOC780529 - uncharacterized LOC780529 ncRNA chr14-3910 chr14 100696610 100696820 + 10.4 0.000 Intergenic Intergenic -30150 NM_003836 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chr17-3905 chr17 52110173 52110383 + 10.4 0.000 intron (NM_001082533, intron 2 of 9) L2b|LINE|L2 48436 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr6-3227 chr6 142361990 142362200 + 10.4 0.000 intron (NM_198569, intron 2 of 24) intron (NM_198569, intron 2 of 24) 60088 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr9-7426 chr9 22895393 22895603 + 10.4 0.000 Intergenic Intergenic 249298 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr16-3102 chr16 67987679 67987889 + 10.4 0.000 intron (NM_001369657, intron 9 of 9) intron (NM_001369657, intron 9 of 9) 5610 NM_001369657 64174 Hs.372633 NM_022355 ENSG00000167261 DPEP2 MBD2 dipeptidase 2 protein-coding chr11-1437 chr11 66607633 66607843 + 10.4 0.000 Intergenic AluJb|SINE|Alu -8844 NM_001198845 100526737 Hs.523822 NM_001198845 ENSG00000248643 RBM14-RBM4 COAZ|PSP2|RBM14|SIP RBM14-RBM4 readthrough protein-coding chrX-1826 chrX 101801801 101802011 + 10.4 0.000 Intergenic Intergenic 55671 NR_159736 55998 Hs.307077 NM_032946 ENSG00000126952 NXF5 - nuclear RNA export factor 5 protein-coding chr3-5658 chr3 12170329 12170539 + 10.4 0.000 intron (NM_133625, intron 10 of 12) intron (NM_133625, intron 10 of 12) -11522 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr11-6527 chr11 69265298 69265508 + 10.4 0.000 Intergenic Intergenic -28752 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr17-3221 chr17 6911013 6911223 + 10.4 0.000 Intergenic L1M1|LINE|L1 17341 NR_120453 245 Hs.378695 NR_002710 ENSG00000262943 ALOX12P2 ALOX12E arachidonate 12-lipoxygenase pseudogene 2 pseudo chr1-15308 chr1 118042740 118042950 + 10.4 0.000 intron (NM_206996, intron 20 of 48) MER51B|LTR|ERV1 113106 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding chr2-8001 chr2 67612692 67612902 + 10.4 0.000 Intergenic Intergenic 212765 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr5-7053 chr5 170043843 170044053 + 10.4 0.000 intron (NR_156756, intron 39 of 52) L2c|LINE|L2 15460 NR_039609 100616498 NR_039609 ENSG00000263831 MIR378E mir-378e microRNA 378e ncRNA chr6-7650 chr6 81995502 81995712 + 10.4 0.000 intron (NR_149135, intron 3 of 3) intron (NR_149135, intron 3 of 3) -57186 NR_149134 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr4-2265 chr4 173372012 173372222 + 10.4 0.000 intron (NM_003864, intron 1 of 3) CpG-21635 1163 NM_003864 8819 Hs.591715 NM_003864 ENSG00000164105 SAP30 - Sin3A associated protein 30 protein-coding chr22-1973 chr22 50489951 50490161 + 10.4 0.000 3' UTR (NM_017584, exon 10 of 10) 3' UTR (NM_017584, exon 10 of 10) 3197 NM_017584 55586 Hs.129227 NM_017584 ENSG00000100253 MIOX ALDRL6 myo-inositol oxygenase protein-coding chr10-4899 chr10 20782555 20782765 + 10.4 0.000 3' UTR (NM_213569, exon 7 of 7) 3' UTR (NM_213569, exon 7 of 7) 114942 NM_006393 10529 Hs.5025 NM_006393 ENSG00000078114 NEBL LASP2|LNEBL nebulette protein-coding chr3-5583 chr3 6874205 6874415 + 10.4 0.000 intron (NM_000844, intron 1 of 9) intron (NM_000844, intron 1 of 9) 13195 NM_181874 2917 Hs.606393 NM_000844 ENSG00000196277 GRM7 GLUR7|GPRC1G|MGLU7|MGLUR7|PPP1R87 glutamate metabotropic receptor 7 protein-coding chr18-2153 chr18 57635522 57635732 + 10.4 0.000 intron (NM_001242804, intron 1 of 2) intron (NM_001242804, intron 1 of 2) 5296 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr10-4280 chr10 6775063 6775273 + 10.4 0.000 intron (NR_108074, intron 1 of 1) intron (NR_108074, intron 1 of 1) 4012 NR_108074 100652997 Hs.255086 NR_108074 ENSG00000281186 LINC00706 - long intergenic non-protein coding RNA 706 ncRNA chr2-10700 chr2 26541880 26542090 + 10.4 0.000 intron (NM_194248, intron 1 of 46) intron (NM_194248, intron 1 of 46) 16771 NM_001287489 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr9-5459 chr9 98542079 98542289 + 10.4 0.000 intron (NM_005458, intron 2 of 18) L1ME4a|LINE|L1 166751 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr7-4774 chr7 77687113 77687323 + 10.4 0.000 intron (NR_134251, intron 1 of 3) intron (NR_134251, intron 1 of 3) 9047 NR_134251 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr3-9967 chr3 96140362 96140572 + 10.4 0.000 Intergenic L1PA13|LINE|L1 -219497 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chr3-6251 chr3 68505273 68505483 + 10.4 0.000 intron (NR_135532, intron 1 of 1) intron (NR_135532, intron 1 of 1) 4741 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr1-13706 chr1 14737085 14737295 + 10.4 0.000 intron (NM_201628, intron 1 of 14) L2a|LINE|L2 138473 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr2-9495 chr2 236443474 236443684 + 10.4 0.000 intron (NR_073043, intron 6 of 19) L1PA10|LINE|L1 60118 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr9-5753 chr9 127131972 127132182 + 10.4 0.000 intron (NM_001190729, intron 8 of 17) intron (NM_001190729, intron 8 of 17) -9442 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr19-4170 chr19 39500686 39500896 + 10.4 0.000 intron (NM_016941, intron 3 of 7) intron (NM_016941, intron 3 of 7) 1844 NM_016941 10683 Hs.127792 NM_016941 ENSG00000090932 DLL3 SCDO1 delta like canonical Notch ligand 3 protein-coding chr11-4066 chr11 17987566 17987776 + 10.4 0.000 intron (NR_104040, intron 8 of 11) intron (NR_104040, intron 8 of 11) 25376 NM_012139 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr16-3671 chr16 89674006 89674216 + 10.4 0.000 Intergenic LTR27E|LTR|ERV1 -12578 NM_001098533 8558 Hs.699177 NM_003674 ENSG00000185324 CDK10 ALSAS|PISSLRE cyclin dependent kinase 10 protein-coding chr12-4827 chr12 57189853 57190063 + 10.4 0.000 intron (NM_002332, intron 42 of 88) intron (NM_002332, intron 42 of 88) -4546 NR_031597 100302201 NR_031597 ENSG00000221365 MIR1228 MIRN1228|hsa-mir-1228|mir-1228 microRNA 1228 ncRNA chrX-1762 chrX 57821944 57822154 + 10.4 0.000 Intergenic HUERS-P3-int|LTR|ERV1 88584 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr10-4822 chr10 11934403 11934613 + 10.4 0.000 intron (NM_080599, intron 19 of 21) intron (NM_080599, intron 19 of 21) -39798 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr8-4798 chr8 490515 490725 + 10.4 0.000 3' UTR (NM_175075, exon 4 of 4) 3' UTR (NM_175075, exon 4 of 4) 25132 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr4-4428 chr4 51922092 51922302 + 10.4 0.000 Intergenic MLT2B4|LTR|ERVL 78618 NM_001287755 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr5-1488 chr5 111680812 111681022 + 10.4 0.000 intron (NR_040093, intron 2 of 6) intron (NR_040093, intron 2 of 6) 75334 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr2-2508 chr2 165668175 165668385 + 10.4 0.000 intron (NM_024969, intron 3 of 4) intron (NM_024969, intron 3 of 4) 95944 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr6-4060 chr6 136544340 136544550 + 10.4 0.000 intron (NM_001198617, intron 1 of 15) intron (NM_001198617, intron 1 of 15) 6374 NM_003980 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr11-7769 chr11 83655555 83655765 + 10.4 0.000 intron (NM_001142699, intron 18 of 27) intron (NM_001142699, intron 18 of 27) 26765 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr1-5273 chr1 205849991 205850201 + 10.4 0.000 promoter-TSS (NR_135186) promoter-TSS (NR_135186) 36 NR_135186 148811 Hs.177744 NM_152491 ENSG00000162877 PM20D1 Cps1 peptidase M20 domain containing 1 protein-coding chr13-1643 chr13 59834946 59835156 + 10.4 0.000 intron (NM_001258369, intron 23 of 26) intron (NM_001258369, intron 23 of 26) -177667 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr5-6557 chr5 15354196 15354406 + 10.4 0.000 Intergenic Intergenic -87741 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr18-1260 chr18 57163947 57164157 + 10.4 0.000 Intergenic MIRb|SINE|MIR 7142 NR_149129 105372138 Hs.574448 NR_149129 ENSG00000267726 LINC02565 - long intergenic non-protein coding RNA 2565 ncRNA chr11-6223 chr11 46875893 46876103 + 10.4 0.000 intron (NM_002334, intron 25 of 37) intron (NM_002334, intron 25 of 37) 29587 NR_038909 100507401 Hs.675301 NR_038909 ENSG00000247675 LRP4-AS1 - LRP4 antisense RNA 1 ncRNA chr11-2244 chr11 76604575 76604785 + 10.4 0.000 Intergenic Intergenic 65258 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr5-4637 chr5 34587615 34587825 + 10.4 0.000 Intergenic Intergenic -68608 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr2-2856 chr2 160158214 160158424 + 10.4 0.000 intron (NM_001282390, intron 6 of 13) intron (NM_001282390, intron 6 of 13) 41953 NM_001282355 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr8-1541 chr8 101204600 101204810 + 10.4 0.000 intron (NM_001267708, intron 1 of 5) intron (NM_001267708, intron 1 of 5) 968 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr8-863 chr8 79392453 79392663 + 10.4 0.000 Intergenic Intergenic 60370 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA chr1-4966 chr1 54279201 54279411 + 10.4 0.000 intron (NM_018070, intron 5 of 16) intron (NM_018070, intron 5 of 16) 42863 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr12-4439 chr12 10430704 10430914 + 10.4 0.000 3' UTR (NM_002260, exon 6 of 6) 3' UTR (NM_002260, exon 6 of 6) 5184 NM_002260 3822 Hs.591157 NM_002260 ENSG00000205809 KLRC2 CD159c|NKG2-C|NKG2C killer cell lectin like receptor C2 protein-coding chr9-7690 chr9 71661929 71662139 + 10.4 0.000 Intergenic Intergenic 106479 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr17-1690 chr17 16353318 16353528 + 10.4 0.000 promoter-TSS (NM_181716) promoter-TSS (NM_181716) 46 NM_181716 201161 Hs.433422 NM_181716 ENSG00000166582 CENPV 3110013H01Rik|CENP-V|PRR6|p30 centromere protein V protein-coding chr18-1793 chr18 12023564 12023774 + 10.4 0.000 intron (NM_014214, intron 5 of 7) intron (NM_014214, intron 5 of 7) 42162 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr6-1924 chr6 43040535 43040745 + 10.4 0.000 exon (NM_001168370, exon 21 of 26) exon (NM_001168370, exon 21 of 26) 13305 NM_001168370 9820 Hs.520136 NM_014780 ENSG00000044090 CUL7 3M1|CUL-7|KIAA0076|dJ20C7.5 cullin 7 protein-coding chrX-1037 chrX 94036172 94036382 + 10.4 0.000 Intergenic L1MB1|LINE|L1 362071 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr11-7073 chr11 121116142 121116352 + 10.4 0.000 intron (NM_005422, intron 5 of 22) intron (NM_005422, intron 5 of 22) 13581 NM_005422 7007 Hs.248162 NM_005422 ENSG00000109927 TECTA DFNA12|DFNA8|DFNB21 tectorin alpha protein-coding chr12-1670 chr12 60335705 60335915 + 10.4 0.000 Intergenic Intergenic 646440 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr1-16347 chr1 219076722 219076932 + 10.4 0.000 intron (NR_031644, intron 6 of 6) intron (NR_031644, intron 6 of 6) 96961 NR_038845 643723 Hs.519774 NR_038845 LYPLAL1-DT LYPLAL1-AS1 LYPLAL1 divergent transcript ncRNA chr22-1331 chr22 17848343 17848553 + 10.4 0.000 intron (NM_001122731, intron 18 of 19) intron (NM_001122731, intron 18 of 19) 58438 NM_001136004 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr21-919 chr21 32964979 32965189 + 10.4 0.000 Intergenic MER2B|DNA|TcMar-Tigger 6196 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA chr12-3920 chr12 130758199 130758409 + 10.4 0.000 Intergenic Intergenic -41999 NM_001351233 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding chr11-2207 chr11 60914769 60914979 + 10.4 0.000 intron (NM_024092, intron 1 of 3) intron (NM_024092, intron 1 of 3) 716 NM_024092 79073 Hs.13662 NM_024092 ENSG00000110108 TMEM109 - transmembrane protein 109 protein-coding chr4-4445 chr4 53532539 53532749 + 10.4 0.000 intron (NM_001126328, intron 2 of 10) intron (NM_001126328, intron 2 of 10) 25625 NM_032622 84708 Hs.518760 NM_032622 ENSG00000072201 LNX1 LNX|MPDZ|PDZRN2 ligand of numb-protein X 1 protein-coding chr3-6376 chr3 88831004 88831214 + 10.4 0.000 Intergenic HAL1ME|LINE|L1 -276512 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr5-7066 chr5 171956485 171956695 + 10.4 0.000 intron (NM_033644, intron 1 of 12) intron (NM_033644, intron 1 of 12) 50283 NM_033645 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr4-5107 chr4 148910746 148910956 + 10.4 0.000 Intergenic Intergenic 31527 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr10-4707 chr10 228461 228671 + 10.4 0.000 intron (NM_001370102, intron 4 of 14) intron (NM_001370102, intron 4 of 14) 48572 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr17-2831 chr17 17648262 17648472 + 10.4 0.000 Intergenic L2c|LINE|L2 29321 NR_131243 105371564 Hs.369680 NR_131243 ENSG00000223979 SMCR2 TCONS_00025215 Smith-Magenis syndrome chromosome region, candidate 2 ncRNA chr19-5995 chr19 1334066 1334276 + 10.4 0.000 Intergenic Intergenic -20788 NM_032853 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr3-7113 chr3 183133572 183133782 + 10.4 0.000 intron (NM_014398, intron 5 of 5) intron (NM_014398, intron 5 of 5) 29057 NM_014398 27074 Hs.518448 NM_014398 ENSG00000078081 LAMP3 CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403 lysosomal associated membrane protein 3 protein-coding chr10-2578 chr10 71670811 71671021 + 10.4 0.000 intron (NM_022124, intron 13 of 67) intron (NM_022124, intron 13 of 67) 48862 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr15-4763 chr15 69751610 69751820 + 10.4 0.000 Intergenic Intergenic -83519 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr1-9455 chr1 35162707 35162917 + 10.4 0.000 Intergenic AluSx|SINE|Alu 30333 NR_136702 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr11-2470 chr11 62156449 62156659 + 10.4 0.000 Intergenic AluSx4|SINE|Alu 32543 NM_001040694 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr7-5441 chr7 38144227 38144437 + 10.4 0.000 Intergenic AluJr|SINE|Alu -33913 NM_001363347 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr1-6092 chr1 117606572 117606782 + 10.4 0.000 promoter-TSS (NR_121626) promoter-TSS (NR_121626) 629 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr16-4289 chr16 27124386 27124596 + 10.4 0.000 Intergenic Intergenic 57564 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr8-2618 chr8 61616667 61616877 + 10.4 0.000 intron (NM_004318, intron 14 of 24) L2a|LINE|L2 73039 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr11-3418 chr11 19715429 19715639 + 10.4 0.000 promoter-TSS (NR_015384) promoter-TSS (NR_015384) -862 NR_015384 100126784 Hs.64341 NR_015384 LOC100126784 - uncharacterized LOC100126784 ncRNA chr22-1334 chr22 20086099 20086309 + 10.4 0.000 TTS (NR_037412) TTS (NR_037412) 146 NR_031706 100302197 NR_031706 ENSG00000284464 MIR1306 MIRN1306|hsa-mir-1306|mir-1306 microRNA 1306 ncRNA chr2-1586 chr2 73177335 73177545 + 10.4 0.000 Intergenic CpG -25134 NM_001134462 344022 Hs.694384 NM_001134462 ENSG00000214513 NOTO - notochord homeobox protein-coding chr11-3107 chr11 33205887 33206097 + 10.4 0.000 Intergenic MLT2B1|LTR|ERVL 44335 NR_034027 338739 Hs.423476 NR_034027 ENSG00000247151 CSTF3-DT CSTF3-AS1 CSTF3 divergent transcript ncRNA chr1-3727 chr1 224357619 224357829 + 10.4 0.000 intron (NR_102347, intron 1 of 3) intron (NR_102347, intron 1 of 3) 845 NM_014184 29097 Hs.445890 NM_014184 ENSG00000143771 CNIH4 CNIH-4|CNIH2|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding chr1-11042 chr1 223486175 223486385 + 10.4 0.000 Intergenic Intergenic 92865 NM_152610 164127 Hs.192090 NM_152610 ENSG00000178395 CCDC185 C1orf65 coiled-coil domain containing 185 protein-coding chr3-1719 chr3 86973519 86973729 + 10.4 0.000 intron (NM_001320494, intron 2 of 3) intron (NM_001320494, intron 2 of 3) 17525 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr9-4216 chr9 68528905 68529115 + 10.4 0.000 intron (NM_021965, intron 10 of 10) intron (NM_021965, intron 10 of 10) 11857 NM_153237 169693 Hs.663056 NM_153237 ENSG00000181778 TMEM252 C9orf71 transmembrane protein 252 protein-coding chr9-1427 chr9 131530287 131530497 + 10.4 0.000 intron (NM_001261451, intron 2 of 6) intron (NM_001261451, intron 2 of 6) 871 NM_031432 83549 Hs.9597 NM_031432 ENSG00000130717 UCK1 URK1 uridine-cytidine kinase 1 protein-coding chr8-3259 chr8 267435 267645 + 10.4 0.000 Intergenic HAL1ME|LINE|L1 35084 NM_001042416 169270 Hs.591388 NM_173539 ENSG00000172748 ZNF596 - zinc finger protein 596 protein-coding chr8-6135 chr8 29575077 29575287 + 10.4 0.000 Intergenic L2b|LINE|L2 172927 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA chr4-1805 chr4 35777966 35778176 + 10.4 0.000 Intergenic MER50|LTR|ERV1 465868 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr2-6906 chr2 101717993 101718203 + 10.4 0.000 intron (NM_145686, intron 2 of 30) AluSp|SINE|Alu 20391 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr1-9453 chr1 34837763 34837973 + 10.4 0.000 Intergenic Intergenic 21177 NM_001164824 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding chr8-6606 chr8 73965340 73965550 + 10.4 0.000 intron (NM_001204858, intron 1 of 4) L1ME2z|LINE|L1 6463 NM_001204862 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding chr13-619 chr13 37059717 37059927 + 10.4 0.000 promoter-TSS (NM_001278482) promoter-TSS (NM_001278482) -109 NM_017569 55578 Hs.435815 NM_017569 ENSG00000102710 SUPT20H C13|C13orf19|FAM48A|FP757|P38IP|SPT20 SPT20 homolog, SAGA complex component protein-coding chr20-1442 chr20 48627258 48627468 + 10.4 0.000 intron (NM_020820, intron 39 of 39) intron (NM_020820, intron 39 of 39) 200636 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr10-3875 chr10 43085655 43085865 + 10.4 0.000 intron (NM_020630, intron 1 of 18) intron (NM_020630, intron 1 of 18) 8691 NM_020975 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr2-5611 chr2 185947797 185948007 + 10.4 0.000 Intergenic MLT2B4|LTR|ERVL 138415 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr4-3200 chr4 17567412 17567622 + 10.4 0.000 Intergenic LTR24|LTR|ERV1 -9787 NM_015907 51056 Hs.570791 NM_015907 ENSG00000002549 LAP3 HEL-S-106|LAP|LAPEP|PEPS leucine aminopeptidase 3 protein-coding chr1-10497 chr1 165008853 165009063 + 10.4 0.000 Intergenic L2|LINE|L2 -234317 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr2-5998 chr2 74406939 74407149 + 10.4 0.000 Intergenic ERVL-E-int|LTR|ERVL 10673 NM_001145054 388963 Hs.445377 NM_001145054 ENSG00000284308 C2orf81 hCG40743 chromosome 2 open reading frame 81 protein-coding chr15-2038 chr15 51930681 51930891 + 10.4 0.000 Intergenic Intergenic -6666 NR_109775 100422556 Hs.664788 NR_109775 LOC100422556 - LEO1 homolog, Paf1/RNA polymerase II complex component pseudogene pseudo chr1-10032 chr1 88535621 88535831 + 10.4 0.000 Intergenic L1ME4c|LINE|L1 -148418 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr18-957 chr18 28794762 28794972 + 10.4 0.000 Intergenic Intergenic -617737 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr17-1442 chr17 31269837 31270047 + 10.4 0.000 intron (NM_001042492, intron 36 of 57) MLT1K|LTR|ERVL-MaLR 27297 NM_002544 4974 Hs.113874 NM_002544 ENSG00000126861 OMG OMGP oligodendrocyte myelin glycoprotein protein-coding chr16-3074 chr16 61440252 61440462 + 10.4 0.000 Intergenic L1MCb|LINE|L1 -384591 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr7-3830 chr7 99372588 99372798 + 10.4 0.000 Intergenic Intergenic -2037 NM_005720 10095 Hs.489284 NM_005720 ENSG00000130429 ARPC1B ARC41|PLTEID|p40-ARC|p41-ARC actin related protein 2/3 complex subunit 1B protein-coding chr6-5197 chr6 131754133 131754343 + 10.4 0.000 Intergenic Intergenic -37934 NR_039610 100616455 NR_039610 ENSG00000266807 MIR548H5 - microRNA 548h-5 ncRNA chr4-3177 chr4 2752438 2752648 + 10.4 0.000 intron (NM_001292016, intron 1 of 4) intron (NM_001292016, intron 1 of 4) 3793 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr22-1005 chr22 50283780 50283990 + 10.4 0.000 exon (NM_012401, exon 14 of 37) exon (NM_012401, exon 14 of 37) -13505 NM_002751 5600 Hs.57732 NM_002751 ENSG00000185386 MAPK11 P38B|P38BETA2|PRKM11|SAPK2|SAPK2B|p38-2|p38Beta mitogen-activated protein kinase 11 protein-coding chr2-12445 chr2 58770207 58770417 + 10.4 0.000 intron (NR_033873, intron 2 of 13) intron (NR_033873, intron 2 of 13) 249559 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr17-3164 chr17 66383446 66383656 + 10.4 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 33303 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr19-3169 chr19 40380993 40381203 + 10.4 0.000 exon (NM_144685, exon 3 of 4) exon (NM_144685, exon 3 of 4) 9083 NM_144685 147746 Hs.79363 NM_144685 ENSG00000160396 HIPK4 - homeodomain interacting protein kinase 4 protein-coding chr2-9474 chr2 235475812 235476022 + 10.4 0.000 Intergenic L1PA16|LINE|L1 -18126 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr6-7859 chr6 106069530 106069740 + 10.4 0.000 Intergenic Intergenic -16701 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr6-1481 chr6 44128068 44128278 + 10.4 0.000 promoter-TSS (NM_032111) promoter-TSS (NM_032111) 619 NM_018426 55362 Hs.414473 NM_018426 ENSG00000137216 TMEM63B C6orf110 transmembrane protein 63B protein-coding chr3-1867 chr3 123809685 123809895 + 10.4 0.000 intron (NM_001321309, intron 3 of 32) intron (NM_001321309, intron 3 of 32) 74542 NM_053025 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr15-3543 chr15 101269952 101270162 + 10.4 0.000 TTS (NM_203472) TTS (NM_203472) 7428 NM_203472 55829 Hs.32148 NM_018445 ENSG00000131871 SELENOS AD-015|ADO15|SBBI8|SELS|SEPS1|VIMP selenoprotein S protein-coding chr21-1159 chr21 41532814 41533024 + 10.4 0.000 Intergenic Intergenic -24761 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr9-1934 chr9 16456458 16456668 + 10.4 0.000 intron (NM_001317939, intron 4 of 6) intron (NM_001317939, intron 4 of 6) -180250 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr5-4284 chr5 149253964 149254174 + 10.4 0.000 intron (NM_001301028, intron 18 of 18) THE1B|LTR|ERVL-MaLR -17769 NM_001323063 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr10-2646 chr10 92103728 92103938 + 10.4 0.000 intron (NM_001178137, intron 7 of 9) intron (NM_001178137, intron 7 of 9) 139446 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr22-965 chr22 19947867 19948077 + 10.4 0.000 intron (NM_001362828, intron 1 of 5) LTR13|LTR|ERVK -2930 NM_001135161 1312 Hs.370408 NM_000754 ENSG00000093010 COMT HEL-S-98n catechol-O-methyltransferase protein-coding chr2-11249 chr2 172367252 172367462 + 10.4 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -59979 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr19-6873 chr19 44922795 44923005 + 10.4 0.000 Intergenic L2a|LINE|L2 -3903 NR_028413 342 Hs.110675 NR_028412 ENSG00000214855 APOC1P1 - apolipoprotein C1 pseudogene 1 pseudo chr1-9679 chr1 50431778 50431988 + 10.4 0.000 Intergenic MIR|SINE|MIR -8440 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr2-7930 chr2 59995237 59995447 + 10.4 0.000 Intergenic MamTip2|DNA|hAT-Tip100 387694 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr9-2244 chr9 36946633 36946843 + 10.4 0.000 intron (NR_104000, intron 6 of 9) L4_A_Mam|LINE|RTE-X -53207 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr3-1638 chr3 100978822 100979032 + 10.4 0.000 intron (NM_001349332, intron 1 of 35) intron (NM_001349332, intron 1 of 35) 14563 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr22-3994 chr22 39175554 39175764 + 10.4 0.000 Intergenic Intergenic -22979 NM_175709 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr2-4831 chr2 67880115 67880325 + 10.4 0.000 Intergenic Intergenic -54658 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr19-1827 chr19 4889480 4889690 + 10.4 0.000 TTS (NM_001080523) TTS (NM_001080523) 13311 NM_001080523 645432 Hs.660674 NM_001080523 ENSG00000205784 ARRDC5 - arrestin domain containing 5 protein-coding chr12-3836 chr12 91576420 91576630 + 10.4 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -393708 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr22-1208 chr22 29255853 29256063 + 10.4 0.000 intron (NM_001267895, intron 14 of 14) intron (NM_001267895, intron 14 of 14) 12023 NR_138044 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr12-2552 chr12 108668123 108668333 + 10.4 0.000 intron (NM_001105237, intron 3 of 10) intron (NM_001105237, intron 3 of 10) 32418 NR_039717 100616240 NR_039717 ENSG00000284388 MIR4496 - microRNA 4496 ncRNA chr7-2118 chr7 23474315 23474525 + 10.4 0.000 Intergenic CpG -3929 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding chr3-4293 chr3 157330239 157330449 + 10.4 0.000 intron (NM_024621, intron 9 of 13) intron (NM_024621, intron 9 of 13) -106506 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr1-3785 chr1 9211483 9211693 + 10.4 0.000 Intergenic MIRb|SINE|MIR -23186 NM_004285 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr2-8959 chr2 189379560 189379770 + 10.4 0.000 Intergenic MIRb|SINE|MIR -61768 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr20-2366 chr20 16673740 16673950 + 10.4 0.000 Intergenic MER74A|LTR|ERVL -56181 NM_003092 6629 Hs.280378 NM_003092 ENSG00000125870 SNRPB2 Msl1|U2B'' small nuclear ribonucleoprotein polypeptide B2 protein-coding chr9-4046 chr9 96495457 96495667 + 10.4 0.000 Intergenic Intergenic 45393 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr18-1050 chr18 11393532 11393742 + 10.4 0.000 Intergenic L1PBa1|LINE|L1 -60841 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr17-2010 chr17 1220402 1220612 + 10.4 0.000 intron (NM_001322841, intron 1 of 22) intron (NM_001322841, intron 1 of 22) 9215 NM_001322841 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr4-3784 chr4 100545543 100545753 + 10.4 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -27626 NM_016242 51705 Hs.152913 NM_016242 ENSG00000164035 EMCN EMCN2|MUC14 endomucin protein-coding chr19-5703 chr19 13143314 13143524 + 10.4 0.000 TTS (NM_001271610) TTS (NM_001271610) 6956 NM_001271610 8677 Hs.43812 NM_003765 ENSG00000104915 STX10 SYN10|hsyn10 syntaxin 10 protein-coding chr2-3756 chr2 7259053 7259263 + 10.4 0.000 Intergenic L1PA15-16|LINE|L1 -162103 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr13-4009 chr13 71211152 71211362 + 10.4 0.000 Intergenic Intergenic 196116 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr18-1723 chr18 3508554 3508764 + 10.4 0.000 exon (NM_001242764, exon 8 of 10) exon (NM_001242764, exon 8 of 10) 42409 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr8-2897 chr8 142788270 142788480 + 10.4 0.000 Intergenic Intergenic -1836 NM_003695 8581 Hs.415762 NM_003695 ENSG00000167656 LY6D E48|Ly-6D lymphocyte antigen 6 family member D protein-coding chr2-6085 chr2 168457392 168457602 + 10.4 0.000 intron (NM_001256126, intron 1 of 10) intron (NM_001256126, intron 1 of 10) 1225 NM_001256126 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr16-1724 chr16 51151492 51151702 + 10.4 0.000 promoter-TSS (NM_002968) promoter-TSS (NM_002968) -325 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr17-5175 chr17 10675010 10675220 + 10.4 0.000 3' UTR (NM_004589, exon 6 of 6) 3' UTR (NM_004589, exon 6 of 6) -17806 NM_002470 4621 Hs.440895 NM_002470 ENSG00000109063 MYH3 CPSKF1A|CPSKF1B|DA2A|DA2B|DA2B3|DA8|HEMHC|MYHC-EMB|MYHSE1|SMHCE myosin heavy chain 3 protein-coding chr7-5249 chr7 18117530 18117740 + 10.4 0.000 intron (NM_001204144, intron 1 of 12) MLT1C|LTR|ERVL-MaLR 9674 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr13-2143 chr13 104824487 104824697 + 10.4 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -641275 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr1-8600 chr1 185268464 185268674 + 10.4 0.000 intron (NM_017673, intron 16 of 18) intron (NM_017673, intron 16 of 18) 48674 NM_006469 10625 Hs.497183 NM_006469 ENSG00000116679 IVNS1ABP ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP influenza virus NS1A binding protein protein-coding chr1-4313 chr1 37724045 37724255 + 10.4 0.000 intron (NM_001099439, intron 8 of 16) L2|LINE|L2 31634 NM_018101 55143 Hs.524571 NM_018101 ENSG00000134690 CDCA8 BOR|BOREALIN|DasraB|MESRGP cell division cycle associated 8 protein-coding chr8-4000 chr8 55815150 55815360 + 10.4 0.000 intron (NM_001317902, intron 10 of 10) intron (NM_001317902, intron 10 of 10) 41809 NM_001363184 96764 Hs.335068 NM_024831 ENSG00000137574 TGS1 NCOA6IP|PIMT|PIPMT trimethylguanosine synthase 1 protein-coding chr19-6220 chr19 6066962 6067172 + 10.4 0.000 intron (NM_000635, intron 1 of 17) intron (NM_000635, intron 1 of 17) 43433 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr8-4472 chr8 117198693 117198903 + 10.4 0.000 Intergenic Intergenic 63803 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr16-4437 chr16 53219600 53219810 + 10.4 0.000 intron (NM_001352157, intron 2 of 37) MIRb|SINE|MIR 11254 NM_001352158 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr17-6381 chr17 81674455 81674665 + 10.4 0.000 TTS (NM_199287) TTS (NM_199287) 7823 NM_199287 339230 Hs.744125 NM_199287 ENSG00000185298 CCDC137 RaRF coiled-coil domain containing 137 protein-coding chr15-2362 chr15 40286689 40286899 + 10.4 0.000 Intergenic Intergenic -4208 NM_001190479 100131244 Hs.711376 NM_001190479 ENSG00000230778 ANKRD63 - ankyrin repeat domain 63 protein-coding chr2-6675 chr2 15550011 15550221 + 10.4 0.000 intron (NR_052013, intron 6 of 50) AluJo|SINE|Alu 11218 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr15-2207 chr15 90775250 90775460 + 10.4 0.000 intron (NM_001287246, intron 13 of 22) intron (NM_001287246, intron 13 of 22) 58009 NM_001287248 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|MGRISCE1|RECQ2|RECQL2|RECQL3 BLM RecQ like helicase protein-coding chr1-6069 chr1 94793000 94793210 + 10.4 0.000 intron (NR_160783, intron 1 of 3) intron (NR_160783, intron 1 of 3) 27127 NR_160784 101928079 Hs.596857 NR_104131 ENSG00000224081 SLC44A3-AS1 LINC01057|XLOC_000303 SLC44A3 antisense RNA 1 ncRNA chr19-3418 chr19 17699825 17700035 + 10.4 0.000 Intergenic Intergenic -11731 NM_001080421 23025 Hs.164502 NM_001080421 ENSG00000130477 UNC13A Munc13-1 unc-13 homolog A protein-coding chr9-5063 chr9 33350404 33350614 + 10.4 0.000 intron (NM_002504, intron 15 of 23) intron (NM_002504, intron 15 of 23) 52059 NM_001170 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr7-5637 chr7 54665379 54665589 + 10.4 0.000 Intergenic Intergenic 93727 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr22-2504 chr22 22824309 22824519 + 10.4 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 1638 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr4-4601 chr4 76899350 76899560 + 10.4 0.000 Intergenic Intergenic -1311 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr5-1734 chr5 156178822 156179032 + 10.4 0.000 Intergenic Intergenic -147830 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr3-7195 chr3 190101413 190101623 + 10.4 0.000 intron (NM_001134418, intron 1 of 14) Tigger1|DNA|TcMar-Tigger 19379 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr6-3056 chr6 67520593 67520803 + 10.4 0.000 Intergenic Intergenic -534653 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr15-2654 chr15 74758866 74759076 + 10.4 0.000 Intergenic Intergenic 10126 NM_000761 1544 Hs.1361 NM_000761 ENSG00000140505 CYP1A2 CP12|CYPIA2|P3-450|P450(PA) cytochrome P450 family 1 subfamily A member 2 protein-coding chr10-4699 chr10 132997221 132997431 + 10.4 0.000 Intergenic Intergenic 31792 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA chr9-6051 chr9 136646972 136647182 + 10.4 0.000 Intergenic Intergenic -11779 NR_046367 51162 Hs.91481 NM_016215 ENSG00000172889 EGFL7 NEU1|VE-STATIN|ZNEU1 EGF like domain multiple 7 protein-coding chr1-11072 chr1 227065207 227065417 + 10.4 0.000 intron (NM_001366019, intron 21 of 36) L3|LINE|CR1 125018 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr1-13240 chr1 219150145 219150355 + 10.4 0.000 intron (NR_038845, intron 2 of 4) intron (NR_038845, intron 2 of 4) 23538 NR_038845 643723 Hs.519774 NR_038845 LYPLAL1-DT LYPLAL1-AS1 LYPLAL1 divergent transcript ncRNA chr6-4796 chr6 78001624 78001834 + 10.4 0.000 Intergenic Intergenic 348690 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr1-8367 chr1 64363387 64363597 + 10.4 0.000 Intergenic MamRep605|LTR?|LTR? -106637 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr4-2813 chr4 38211582 38211792 + 10.4 0.000 Intergenic Intergenic 91733 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr2-6402 chr2 128473264 128473474 + 10.4 0.000 Intergenic Intergenic -154501 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr1-4913 chr1 41025267 41025477 + 10.4 0.000 intron (NR_037868, intron 1 of 3) MIRb|SINE|MIR -3617 NM_001168247 200172 Hs.194609 NM_144990 ENSG00000171790 SLFNL1 - schlafen like 1 protein-coding chr2-13309 chr2 130729707 130729917 + 10.4 0.000 exon (NM_207364, exon 1 of 1) exon (NM_207364, exon 1 of 1) 742 NM_207364 344561 Hs.452574 NM_207364 ENSG00000173302 GPR148 BTR|PGR6 G protein-coupled receptor 148 protein-coding chr21-1498 chr21 42073588 42073798 + 10.4 0.000 intron (NM_001004416, intron 1 of 22) intron (NM_001004416, intron 1 of 22) 2376 NM_001004416 89766 Hs.242520 NM_173568 ENSG00000177398 UMODL1 - uromodulin like 1 protein-coding chr6-1600 chr6 37788357 37788567 + 10.4 0.000 Intergenic Intergenic -31265 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr13-1398 chr13 20713828 20714038 + 10.4 0.000 intron (NM_138284, intron 2 of 2) intron (NM_138284, intron 2 of 2) 10590 NM_138284 53342 Hs.655142 NM_138284 ENSG00000172458 IL17D IL-17D interleukin 17D protein-coding chr10-4742 chr10 1572904 1573114 + 10.4 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) 26249 NR_152792 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chrX-4915 chrX 109095535 109095745 + 10.4 0.000 Intergenic L1PA15|LINE|L1 359100 NR_110652 101928358 Hs.722300 NR_110652 ENSG00000237863 LOC101928358 - uncharacterized LOC101928358 ncRNA chr2-11668 chr2 7281510 7281720 + 10.4 0.000 Intergenic Intergenic -139646 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr4-2197 chr4 123056082 123056292 + 10.4 0.000 intron (NM_001345856, intron 11 of 15) intron (NM_001345856, intron 11 of 15) 133109 NM_001317799 166378 Hs.709648 NM_145207 ENSG00000145375 SPATA5 AFG2|EHLMRS|SPAF spermatogenesis associated 5 protein-coding chr17-1689 chr17 16217083 16217293 + 10.4 0.000 promoter-TSS (NM_004278) promoter-TSS (NM_004278) -22 NM_004278 9487 Hs.499793 NM_004278 ENSG00000108474 PIGL CHIME phosphatidylinositol glycan anchor biosynthesis class L protein-coding chr6-2856 chr6 2970868 2971078 + 10.4 0.000 promoter-TSS (NM_001271823) promoter-TSS (NM_001271823) 75 NM_001271823 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr17-3393 chr17 2138954 2139164 + 10.4 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -50298 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr10-6610 chr10 92798475 92798685 + 10.4 0.000 Intergenic L1PB1|LINE|L1 -28251 NM_001013848 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr5-4567 chr5 22872164 22872374 + 10.4 0.000 Intergenic Intergenic -18925 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr2-7392 chr2 7939705 7939915 + 10.4 0.000 intron (NR_015405, intron 2 of 2) intron (NR_015405, intron 2 of 2) 37004 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr9-8395 chr9 119284428 119284638 + 10.4 0.000 intron (NM_014618, intron 2 of 7) MIRb|SINE|MIR 84902 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr13-3221 chr13 26489457 26489667 + 10.4 0.000 Intergenic Intergenic -68121 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr5-6347 chr5 136398075 136398285 + 10.4 0.000 Intergenic Intergenic -32704 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr6-6111 chr6 153625189 153625399 + 10.4 0.000 Intergenic Intergenic -385202 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chrX-5089 chrX 126700975 126701185 + 10.4 0.000 Intergenic L1M1|LINE|L1 -118649 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr4-2046 chr4 8437390 8437600 + 10.4 0.000 intron (NM_003501, intron 1 of 17) intron (NM_003501, intron 1 of 17) 3228 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr6-4831 chr6 83154075 83154285 + 10.4 0.000 exon (NM_001199942, exon 33 of 40) exon (NM_001199942, exon 33 of 40) 39085 NM_001199918 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr3-7201 chr3 190613962 190614172 + 10.4 0.000 intron (NR_157352, intron 5 of 10) intron (NR_157352, intron 5 of 10) 99982 NM_001167928 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr2-4406 chr2 85884691 85884901 + 10.4 0.000 intron (NM_001354229, intron 1 of 7) intron (NM_001354229, intron 1 of 7) 2753 NM_001354238 8869 Hs.415117 NM_003896 ENSG00000115525 ST3GAL5 SATI|SIAT9|SIATGM3S|SPDRS|ST3Gal V|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding chrX-1549 chrX 46294394 46294604 + 10.4 0.000 Intergenic Intergenic 33175 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr2-10690 chr2 25190393 25190603 + 10.4 0.000 Intergenic Intergenic -13815 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr17-5395 chr17 32536950 32537160 + 10.4 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 50062 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr2-5472 chr2 129324114 129324324 + 10.4 0.000 Intergenic Intergenic -50328 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr20-986 chr20 50689949 50690159 + 10.4 0.000 intron (NM_001290268, intron 1 of 21) intron (NM_001290268, intron 1 of 21) 1488 NM_001290268 140876 Hs.372578 NM_080829 ENSG00000042062 RIPOR3 C20orf175|C20orf176|FAM65C RIPOR family member 3 protein-coding chr15-3003 chr15 55489335 55489545 + 10.4 0.000 intron (NM_001033560, intron 4 of 8) AluSz|SINE|Alu 9144 NR_037923 100533483 Hs.285051 NR_037923 ENSG00000261771 DNAAF4-CCPG1 DYX1C1-CCPG1 DNAAF4-CCPG1 readthrough (NMD candidate) ncRNA chr17-3779 chr17 35498766 35498976 + 10.4 0.000 intron (NM_001363830, intron 2 of 4) intron (NM_001363830, intron 2 of 4) -11132 NM_001195790 100506736 Hs.447559 NM_001145027 ENSG00000205045 SLFN12L - schlafen family member 12 like protein-coding chr4-6224 chr4 60022869 60023079 + 10.4 0.000 Intergenic Intergenic -899645 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr9-5487 chr9 100843987 100844197 + 10.4 0.000 Intergenic MLT2A1|LTR|ERVL -184635 NM_207299 54886 Hs.382683 NM_017753 ENSG00000148123 PLPPR1 LPPR1|PRG-3 phospholipid phosphatase related 1 protein-coding chr2-6914 chr2 106016815 106017025 + 10.4 0.000 Intergenic MER47A|DNA|TcMar-Tigger -48768 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding chr12-1731 chr12 46371175 46371385 + 10.4 0.000 exon (NM_018976, exon 2 of 16) exon (NM_018976, exon 2 of 16) 1493 NM_001307936 54407 Hs.221847 NM_018976 ENSG00000134294 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38 member 2 protein-coding chr3-2152 chr3 129211684 129211894 + 10.4 0.000 Intergenic Intergenic -27893 NM_001127196 7555 Hs.518249 NM_003418 ENSG00000169714 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger nucleic acid binding protein protein-coding chr19-2156 chr19 8396701 8396911 + 10.4 0.000 intron (NM_004218, intron 1 of 4) L2a|LINE|L2 -6115 NR_038237 100507567 Hs.637720 NR_038237 ENSG00000269386 RAB11B-AS1 MIR4999HG RAB11B antisense RNA 1 ncRNA chr17-3519 chr17 64541778 64541988 + 10.4 0.000 TTS (NM_022739) TTS (NM_022739) 34906 NM_001316990 90799 Hs.569713 NM_138363 ENSG00000258890 CEP95 CCDC45 centrosomal protein 95 protein-coding chr2-9052 chr2 200209922 200210132 + 10.4 0.000 Intergenic AluJb|SINE|Alu -95852 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr19-2640 chr19 5807610 5807820 + 10.4 0.000 Intergenic MIR3|SINE|MIR -16087 NM_004558 4902 Hs.234775 NM_004558 ENSG00000171119 NRTN NTN neurturin protein-coding chr2-3476 chr2 174836792 174837002 + 10.4 0.000 intron (NM_001025201, intron 7 of 12) intron (NM_001025201, intron 7 of 12) 10721 NM_001206602 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr12-4084 chr12 55156766 55156976 + 10.4 0.000 Intergenic L1PA4|LINE|L1 27102 NM_001005243 441639 Hs.553827 NM_001005243 ENSG00000170605 OR9K2 OR12-2 olfactory receptor family 9 subfamily K member 2 protein-coding chr10-3749 chr10 121287612 121287822 + 10.4 0.000 Intergenic Intergenic 243597 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr2-7383 chr2 6448864 6449074 + 10.4 0.000 Intergenic Intergenic -73547 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr17-4981 chr17 80773369 80773579 + 10.4 0.000 intron (NM_020761, intron 6 of 33) intron (NM_020761, intron 6 of 33) 32158 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr1-2286 chr1 11790880 11791090 + 10.4 0.000 intron (NM_001330358, intron 11 of 11) intron (NM_001330358, intron 11 of 11) -11366 NR_126000 102724659 Hs.737635 NR_126000 ENSG00000177553 LOC102724659 - uncharacterized LOC102724659 ncRNA chr2-3659 chr2 169391001 169391211 + 10.4 0.000 Intergenic Intergenic -28572 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr9-7276 chr9 6652297 6652507 + 10.4 0.000 Intergenic AluSx1|SINE|Alu -6710 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr6-2588 chr6 79461919 79462129 + 10.4 0.000 Intergenic Intergenic 75406 NM_001122769 167691 Hs.21945 NM_181714 ENSG00000135338 LCA5 C6orf152 lebercilin LCA5 protein-coding chr4-5468 chr4 55403814 55404024 + 10.4 0.000 intron (NR_073070, intron 2 of 6) intron (NR_073070, intron 2 of 6) 7962 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr22-756 chr22 29217273 29217483 + 10.4 0.000 intron (NM_001267895, intron 3 of 14) intron (NM_001267895, intron 3 of 14) 11482 NM_133455 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr6-3442 chr6 141647189 141647399 + 10.4 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 441505 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr12-6327 chr12 54676656 54676866 + 10.4 0.000 Intergenic Intergenic -28396 NM_053283 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr11-3375 chr11 126079560 126079770 + 10.4 0.000 Intergenic Intergenic -16373 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr8-1159 chr8 22549232 22549442 + 10.4 0.000 Intergenic Intergenic -2590 NM_005775 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr9-5360 chr9 90239957 90240167 + 10.4 0.000 Intergenic Intergenic 193427 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr12-3001 chr12 122841440 122841650 + 10.4 0.000 intron (NM_003959, intron 1 of 31) intron (NM_003959, intron 1 of 31) 6088 NM_001303097 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr9-6806 chr9 35555089 35555299 + 10.4 0.000 exon (NM_001135999, exon 3 of 12) exon (NM_001135999, exon 3 of 12) 8684 NM_001287239 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr2-5239 chr2 47345039 47345249 + 10.4 0.000 promoter-TSS (NR_110208) promoter-TSS (NR_110208) -70 NR_110208 101927043 Hs.515976 NR_110207 ENSG00000234690 EPCAM-DT - EPCAM divergent transcript ncRNA chr4-2123 chr4 70366698 70366908 + 10.4 0.000 exon (NM_012390, exon 3 of 3) exon (NM_012390, exon 3 of 3) 6043 NM_012390 26952 Hs.701334 NM_012390 ENSG00000109208 SMR3A P-B1|PBI|PRL5|PROL5 submaxillary gland androgen regulated protein 3A protein-coding chr5-3597 chr5 98065341 98065551 + 10.4 0.000 Intergenic Intergenic 95793 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr13-2484 chr13 51803033 51803243 + 10.4 0.000 intron (NM_001031719, intron 1 of 7) intron (NM_001031719, intron 1 of 7) 1024 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr8-3654 chr8 6531984 6532194 + 10.4 0.000 intron (NM_001118888, intron 1 of 7) intron (NM_001118888, intron 1 of 7) 31156 NM_001147 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr6-3737 chr6 6713053 6713263 + 10.4 0.000 Intergenic Intergenic -90332 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr14-3404 chr14 95656756 95656966 + 10.4 0.000 intron (NR_152604, intron 3 of 7) HAL1|LINE|L1 4764 NR_028288 27004 Hs.510368 NM_012468 TCL6 TNG1|TNG2 T cell leukemia/lymphoma 6 ncRNA chrX-3861 chrX 155239237 155239447 + 10.4 0.000 3' UTR (NM_001303543, exon 6 of 6) 3' UTR (NM_001303543, exon 6 of 6) 22882 NM_003372 7411 Hs.436803 NM_003372 ENSG00000155959 VBP1 HIBBJ46|PFD3|PFDN3|VBP-1 VHL binding protein 1 protein-coding chr1-6166 chr1 185439801 185440011 + 10.4 0.000 Intergenic Intergenic -104867 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr12-2899 chr12 49556413 49556623 + 10.4 0.000 intron (NM_012284, intron 13 of 14) intron (NM_012284, intron 13 of 14) 9921 NM_001012300 10445 Hs.25313 NM_006337 ENSG00000187778 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding chr7-4644 chr7 30653065 30653275 + 10.4 0.000 3' UTR (NM_001883, exon 12 of 12) 3' UTR (NM_001883, exon 12 of 12) 29286 NM_001883 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chrX-2007 chrX 14763055 14763265 + 10.4 0.000 Intergenic L1ME3A|LINE|L1 109909 NM_001324162 2187 Hs.554740 NM_152633 ENSG00000181544 FANCB FA2|FAAP90|FAAP95|FAB|FACB FA complementation group B protein-coding chr9-4938 chr9 14181331 14181541 + 10.4 0.000 promoter-TSS (NM_001282787) promoter-TSS (NM_001282787) -632 NR_161385 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr11-6017 chr11 24574592 24574802 + 10.4 0.000 intron (NM_001252008, intron 1 of 11) MER67D|LTR|ERV1 77644 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr12-2424 chr12 49541481 49541691 + 10.4 0.000 intron (NM_012284, intron 2 of 14) intron (NM_012284, intron 2 of 14) 2556 NM_012284 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr3-3689 chr3 159765759 159765969 + 10.4 0.000 intron (NR_121669, intron 2 of 2) intron (NR_121669, intron 2 of 2) 2748 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr6-3121 chr6 104540852 104541062 + 10.4 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 318589 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr11-6857 chr11 100018280 100018490 + 10.4 0.000 intron (NM_001243270, intron 8 of 23) L1ME1|LINE|L1 462240 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr10-5264 chr10 67987902 67988112 + 10.4 0.000 intron (NM_001278185, intron 15 of 23) intron (NM_001278185, intron 15 of 23) 22876 NR_131184 100009667 NR_131184 POU5F1P5 Oct4-pg5 POU class 5 homeobox 1 pseudogene 5 pseudo chrX-1792 chrX 81363853 81364063 + 10.4 0.000 Intergenic Intergenic 161856 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr1-10601 chr1 176946999 176947209 + 10.4 0.000 intron (NM_207108, intron 12 of 21) intron (NM_207108, intron 12 of 21) 82341 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr10-5189 chr10 59812628 59812838 + 10.4 0.000 exon (NM_005436, exon 5 of 9) exon (NM_005436, exon 5 of 9) -59278 NM_001304731 100507027 Hs.648790 NM_001304731 ENSG00000227877 MRLN LINC00948|Linc-RAM|M1|MLN|MUSER1 myoregulin protein-coding chr9-4344 chr9 128917384 128917594 + 10.4 0.000 3' UTR (NM_019594, exon 4 of 4) 3' UTR (NM_019594, exon 4 of 4) -3493 NM_001100876 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr15-2230 chr15 97247284 97247494 + 10.4 0.000 Intergenic LTR8|LTR|ERV1 274422 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chr15-1746 chr15 50633801 50634011 + 10.4 0.000 intron (NR_149154, intron 8 of 37) L1ME4b|LINE|L1 52891 NM_001301212 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr6-1921 chr6 39083848 39084058 + 10.4 0.000 intron (NR_136563, intron 12 of 13) L2b|LINE|L2 9639 NR_162114 113218508 NR_162114 MIR9983 - microRNA 9983 ncRNA chr3-5915 chr3 41681543 41681753 + 10.4 0.000 exon (NM_001322500, exon 29 of 36) exon (NM_001322500, exon 29 of 36) 280455 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr7-8862 chr7 89825927 89826137 + 10.4 0.000 Intergenic Intergenic -293368 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr17-3753 chr17 30203544 30203754 + 10.4 0.000 intron (NM_001045, intron 13 of 14) intron (NM_001045, intron 13 of 14) 32048 NM_001045 6532 Hs.29792 NM_001045 ENSG00000108576 SLC6A4 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT solute carrier family 6 member 4 protein-coding chr20-1763 chr20 50574316 50574526 + 10.4 0.000 intron (NM_002827, intron 4 of 9) intron (NM_002827, intron 4 of 9) -11365 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr1-12729 chr1 57940770 57940980 + 10.4 0.000 intron (NM_021080, intron 1 of 16) intron (NM_021080, intron 1 of 16) 80294 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr5-2657 chr5 10990196 10990406 + 10.4 0.000 intron (NM_001288715, intron 18 of 20) intron (NM_001288715, intron 18 of 20) -229067 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr2-7286 chr2 236055866 236056076 + 10.4 0.000 intron (NM_001037131, intron 16 of 17) intron (NM_001037131, intron 16 of 17) 112415 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chrX-843 chrX 120213804 120214014 + 10.4 0.000 Intergenic L1MA4|LINE|L1 31358 NR_027131 158801 Hs.442518 NM_173522 ENSG00000233382 NKAPP1 CXorf42 NFKB activating protein pseudogene 1 pseudo chr12-2718 chr12 131625046 131625256 + 10.4 0.000 Intergenic MIR|SINE|MIR 22970 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr13-1157 chr13 33997725 33997935 + 10.4 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 179681 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr3-7021 chr3 171621241 171621451 + 10.4 0.000 intron (NM_002662, intron 23 of 26) intron (NM_002662, intron 23 of 26) -160938 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr10-4843 chr10 13897570 13897780 + 10.4 0.000 intron (NM_018027, intron 2 of 24) AluSx1|SINE|Alu 74221 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr5-8272 chr5 112846312 112846522 + 10.4 0.000 TTS (NM_001354898) TTS (NM_001354898) -14771 NM_001204196 6728 Hs.637001 NM_003135 ENSG00000153037 SRP19 - signal recognition particle 19 protein-coding chr11-1397 chr11 3581251 3581461 + 10.4 0.000 Intergenic CpG -9369 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA chr17-3518 chr17 64525650 64525860 + 10.4 0.000 intron (NM_138363, intron 8 of 19) intron (NM_138363, intron 8 of 19) 18778 NM_001316990 90799 Hs.569713 NM_138363 ENSG00000258890 CEP95 CCDC45 centrosomal protein 95 protein-coding chr16-2194 chr16 75012847 75013057 + 10.4 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 13928 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr5-4392 chr5 177396746 177396956 + 10.4 0.000 intron (NM_003052, intron 11 of 12) intron (NM_003052, intron 11 of 12) 3810 NM_001029886 345456 Hs.130196 NM_001029886 ENSG00000196570 PFN3 - profilin 3 protein-coding chr1-8505 chr1 153426820 153427030 + 10.4 0.000 Intergenic Intergenic -4342 NM_001319198 6279 Hs.416073 NM_002964 ENSG00000143546 S100A8 60B8AG|CAGA|CFAG|CGLA|CP-10|L1Ag|MA387|MIF|MRP8|NIF|P8 S100 calcium binding protein A8 protein-coding chr3-3013 chr3 106745485 106745695 + 10.4 0.000 Intergenic MLT1M|LTR|ERVL-MaLR 495048 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr13-1743 chr13 109214358 109214568 + 10.4 0.000 Intergenic Intergenic -47160 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr4-1967 chr4 141020768 141020978 + 10.4 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 112596 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr17-4580 chr17 82726248 82726458 + 10.4 0.000 intron (NR_046408, intron 5 of 6) intron (NR_046408, intron 5 of 6) -9262 NM_022158 64122 Hs.151135 NM_022158 ENSG00000167363 FN3K - fructosamine 3 kinase protein-coding chr1-3041 chr1 6363182 6363392 + 10.4 0.000 intron (NM_007274, intron 1 of 8) LTR13|LTR|ERVK -2573 NM_181865 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr1-9682 chr1 50902555 50902765 + 10.4 0.000 intron (NM_007051, intron 1 of 18) MER2|DNA|TcMar-Tigger 57607 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr16-4860 chr16 88318015 88318225 + 10.4 0.000 Intergenic Intergenic -109351 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr1-11152 chr1 236524442 236524652 + 10.4 0.000 promoter-TSS (NR_034040) promoter-TSS (NR_034040) -39 NR_034040 100287902 Hs.677376 NR_034040 ENSG00000223776 LGALS8-AS1 - LGALS8 antisense RNA 1 ncRNA chr16-5592 chr16 51222346 51222556 + 10.4 0.000 intron (NR_039672, intron 5 of 6) intron (NR_039672, intron 5 of 6) -71179 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr12-4548 chr12 27424649 27424859 + 10.4 0.000 3' UTR (NM_020183, exon 17 of 17) 3' UTR (NM_020183, exon 17 of 17) 21880 NR_109975 101928646 Hs.434269 NR_109975 ENSG00000245311 ARNTL2-AS1 - ARNTL2 antisense RNA 1 ncRNA chr5-1951 chr5 34523046 34523256 + 10.4 0.000 Intergenic Intergenic -133177 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr9-5355 chr9 90056296 90056506 + 10.4 0.000 Intergenic Intergenic -14902 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr19-4751 chr19 29218399 29218609 + 10.4 0.000 Intergenic Intergenic -5353 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr14-3315 chr14 86528512 86528722 + 10.4 0.000 Intergenic L2a|LINE|L2 -377161 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr17-5829 chr17 65482591 65482801 + 10.4 0.000 Intergenic Intergenic 25155 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr7-3352 chr7 93548095 93548305 + 10.4 0.000 intron (NM_001164737, intron 2 of 15) Charlie2a|DNA|hAT-Charlie 11610 NM_001164738 799 Hs.489127 NM_001742 ENSG00000004948 CALCR CRT|CT-R|CTR|CTR1 calcitonin receptor protein-coding chr3-6455 chr3 105967125 105967335 + 10.4 0.000 Intergenic Intergenic -97829 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr13-1949 chr13 98483796 98484006 + 10.4 0.000 intron (NM_001032296, intron 2 of 10) intron (NM_001032296, intron 2 of 10) 38224 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr8-6467 chr8 61904958 61905168 + 10.4 0.000 Intergenic FRAM|SINE|Alu 15224 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr15-3653 chr15 90493465 90493675 + 10.4 0.000 intron (NM_003870, intron 35 of 37) L1ME2z|LINE|L1 -36353 NM_022769 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr12-3998 chr12 24561370 24561580 + 10.4 0.000 intron (NM_152989, intron 1 of 17) intron (NM_152989, intron 1 of 17) 1016 NM_001261414 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr11-5930 chr11 15120511 15120721 + 10.4 0.000 intron (NM_001042536, intron 1 of 12) L2b|LINE|L2 5693 NM_001042536 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr2-9466 chr2 235095735 235095945 + 10.4 0.000 Intergenic L1MD2|LINE|L1 68105 NM_001371306 chr9-3001 chr9 93643058 93643268 + 10.4 0.000 intron (NM_005392, intron 3 of 21) intron (NM_005392, intron 3 of 21) 48322 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr7-3888 chr7 111232586 111232796 + 10.4 0.000 intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) 141564 NM_018334 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr19-3413 chr19 17256673 17256883 + 10.4 0.000 intron (NM_031941, intron 8 of 12) intron (NM_031941, intron 8 of 12) 7967 NR_135632 83878 Hs.512773 NM_031941 ENSG00000130307 USHBP1 AIEBP|MCC2 USH1 protein network component harmonin binding protein 1 protein-coding chr11-5092 chr11 117635277 117635487 + 10.4 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 161834 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr2-10490 chr2 222206604 222206814 + 10.4 0.000 intron (NM_181457, intron 7 of 7) intron (NM_181457, intron 7 of 7) -91438 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr3-6038 chr3 49811733 49811943 + 10.4 0.000 intron (NM_003335, intron 8 of 23) intron (NM_003335, intron 8 of 23) 2115 NM_003335 7318 Hs.16695 NM_003335 ENSG00000182179 UBA7 D8|UBA1B|UBE1L|UBE2 ubiquitin like modifier activating enzyme 7 protein-coding chr2-8303 chr2 105296250 105296460 + 10.4 0.000 intron (NM_001142621, intron 4 of 11) intron (NM_001142621, intron 4 of 11) 33301 NR_137328 9392 Hs.446350 NM_004257 ENSG00000135966 TGFBRAP1 TRAP-1|TRAP1|VPS3 transforming growth factor beta receptor associated protein 1 protein-coding chr9-1558 chr9 4741694 4741904 + 10.4 0.000 promoter-TSS (NM_016282) promoter-TSS (NM_016282) 0 NM_001199855 50808 Hs.732022 NM_016282 ENSG00000147853 AK3 AK3L1|AK6|AKL3L|AKL3L1|FIX adenylate kinase 3 protein-coding chr1-14401 chr1 44473690 44473900 + 10.4 0.000 intron (NM_001319957, intron 1 of 13) Tigger13a|DNA|TcMar-Tigger 49794 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr10-8196 chr10 71899426 71899636 + 10.4 0.000 Intergenic L1M1|LINE|L1 -48280 NM_002778 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr10-1792 chr10 86803207 86803417 + 10.4 0.000 intron (NM_004329, intron 1 of 12) AluJr|SINE|Alu 46673 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr9-4912 chr9 9176583 9176793 + 10.4 0.000 intron (NM_002839, intron 10 of 45) MSTD|LTR|ERVL-MaLR 318670 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr15-2914 chr15 44035327 44035537 + 10.4 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) -157261 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr8-4691 chr8 139845825 139846035 + 10.4 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -142807 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr19-4584 chr19 11532130 11532340 + 10.4 0.000 Intergenic L1MC4a|LINE|L1 -3101 NM_001142465 51295 Hs.515146 NM_016581 ENSG00000130159 ECSIT SITPEC ECSIT signalling integrator protein-coding chr4-7136 chr4 37439660 37439870 + 10.4 0.000 intron (NM_001144990, intron 6 of 6) LTR78|LTR|ERV1 -14160 NM_001104629 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr5-8113 chr5 97937968 97938178 + 10.4 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 97315 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA chr2-11149 chr2 143505441 143505651 + 10.4 0.000 intron (NM_018460, intron 9 of 13) intron (NM_018460, intron 9 of 13) 376127 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr1-10676 chr1 185329097 185329307 + 10.4 0.000 intron (NR_038424, intron 3 of 3) intron (NR_038424, intron 3 of 3) 5837 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr17-5183 chr17 12433988 12434198 + 10.4 0.000 Intergenic Intergenic -115875 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chr9-2421 chr9 135511708 135511918 + 10.4 0.000 Intergenic L1MB7|LINE|L1 -5366 NR_121579 101928525 Hs.713076 NR_121579 ENSG00000226706 LOC101928525 - uncharacterized LOC101928525 ncRNA chr22-2405 chr22 17472069 17472279 + 10.4 0.000 intron (NM_001290047, intron 1 of 18) intron (NM_001290047, intron 1 of 18) -91265 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr12-1125 chr12 57507754 57507964 + 10.4 0.000 intron (NM_004990, intron 11 of 20) SVA_D|Retroposon|SVA -4829 NR_106816 102465454 NR_106816 ENSG00000284152 MIR6758 hsa-mir-6758 microRNA 6758 ncRNA chr1-11560 chr1 185499930 185500140 + 10.4 0.000 Intergenic Intergenic 128453 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr6-4081 chr6 141865769 141865979 + 10.4 0.000 Intergenic L1PREC2|LINE|L1 222925 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr5-3921 chr5 172508080 172508290 + 10.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 50829 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr5-3350 chr5 136776309 136776519 + 10.4 0.000 Intergenic Intergenic -351783 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr15-1307 chr15 61459978 61460188 + 10.4 0.000 Intergenic Intergenic -230781 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr7-5691 chr7 67558616 67558826 + 10.4 0.000 Intergenic Intergenic 222745 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr11-9060 chr11 29432097 29432307 + 10.4 0.000 Intergenic MER1A|DNA|hAT-Charlie -162211 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr16-2973 chr16 12177823 12178033 + 10.4 0.000 intron (NM_032167, intron 13 of 20) L2a|LINE|L2 201194 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr1-5009 chr1 66951608 66951818 + 10.4 0.000 intron (NM_001077700, intron 4 of 13) AluJo|SINE|Alu 21457 NM_001077701 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr10-3006 chr10 99966499 99966709 + 10.4 0.000 intron (NM_015221, intron 3 of 16) intron (NM_015221, intron 3 of 16) -35697 NM_001318326 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr13-898 chr13 43529106 43529316 + 10.4 0.000 intron (NM_001347965, intron 1 of 15) MER44C|DNA|TcMar-Tigger 80359 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr13-2150 chr13 107150348 107150558 + 10.4 0.000 Intergenic MSTA|LTR|ERVL-MaLR 170510 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chr6-4457 chr6 35294404 35294614 + 10.4 0.000 exon (NM_003427, exon 13 of 14) exon (NM_003427, exon 13 of 14) -3309 NM_022047 50619 Hs.15476 NM_022047 ENSG00000023892 DEF6 IBP|SLAT|SWAP70L DEF6 guanine nucleotide exchange factor protein-coding chr3-10587 chr3 142808148 142808358 + 10.4 0.000 TTS (NM_003304) TTS (NM_003304) 80830 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr4-4972 chr4 131669519 131669729 + 10.4 0.000 Intergenic MER70-int|LTR|ERVL -95214 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr18-2014 chr18 43130155 43130365 + 10.4 0.000 Intergenic Intergenic -14568 NM_001272077 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr4-5194 chr4 160209025 160209235 + 10.4 0.000 Intergenic Intergenic -431346 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chrX-2218 chrX 42241505 42241715 + 10.4 0.000 Intergenic Intergenic -318056 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr3-5270 chr3 115800626 115800836 + 10.4 0.000 Intergenic MER77B|LTR|ERVL 104395 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr13-2354 chr13 36527411 36527621 + 10.4 0.000 Intergenic Intergenic 95021 NM_003914 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr10-8239 chr10 74078244 74078454 + 10.4 0.000 intron (NM_014000, intron 6 of 21) intron (NM_014000, intron 6 of 21) 72479 NR_135191 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr6-4199 chr6 3522805 3523015 + 10.4 0.000 Intergenic Intergenic -66351 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr22-2763 chr22 40756719 40756929 + 10.4 0.000 Intergenic AluJr|SINE|Alu 57134 NR_039923 100616283 NR_039923 ENSG00000266594 MIR4766 mir-4766 microRNA 4766 ncRNA chr10-5499 chr10 80773520 80773730 + 10.4 0.000 Intergenic L1MB8|LINE|L1 123828 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr12-4731 chr12 51499308 51499518 + 10.4 0.000 intron (NM_001039960, intron 22 of 24) L1ME4a|LINE|L1 74296 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr10-5363 chr10 72940447 72940657 + 10.4 0.000 intron (NM_001318125, intron 2 of 2) AluSx1|SINE|Alu 14254 NM_001318124 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chr8-2667 chr8 83969063 83969273 + 10.4 0.000 Intergenic L1PA7|LINE|L1 -213619 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr13-2244 chr13 25374057 25374267 + 10.4 0.000 intron (NM_016529, intron 1 of 36) L2|LINE|L2 2188 NM_016529 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr16-3770 chr16 28267629 28267839 + 10.4 0.000 Intergenic HAL1|LINE|L1 -24791 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr4-8088 chr4 123742025 123742235 + 10.4 0.000 intron (NR_027105, intron 3 of 5) intron (NR_027105, intron 3 of 5) -32134 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr12-1764 chr12 85733457 85733667 + 10.4 0.000 Intergenic LTR26|LTR|ERV1 102847 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr11-10137 chr11 89303266 89303476 + 10.4 0.000 Intergenic LTR16|LTR|ERVL 125496 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr1-10345 chr1 154095147 154095357 + 10.4 0.000 intron (NM_001159484, intron 14 of 37) intron (NM_001159484, intron 14 of 37) 9340 NR_049883 100847024 NR_049883 ENSG00000263987 MIR5698 - microRNA 5698 ncRNA chr14-1599 chr14 96176863 96177073 + 10.4 0.000 Intergenic Intergenic -27830 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr2-2954 chr2 25164903 25165113 + 10.4 0.000 intron (NM_001319205, intron 1 of 2) intron (NM_001319205, intron 1 of 2) 3572 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr19-1423 chr19 55476518 55476728 + 10.4 0.000 promoter-TSS (NM_033113) promoter-TSS (NM_033113) 6 NM_033113 89887 Hs.525209 NM_033113 ENSG00000197483 ZNF628 ZEC|Zfp628 zinc finger protein 628 protein-coding chr6-1823 chr6 149080832 149081042 + 10.4 0.000 Intergenic Intergenic -48276 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr14-3322 chr14 88030764 88030974 + 10.4 0.000 intron (NR_046094, intron 2 of 3) ERVL-E-int|LTR|ERVL -4557 NR_110121 101928791 Hs.641889 NR_110121 ENSG00000258826 LINC01147 - long intergenic non-protein coding RNA 1147 ncRNA chr12-5210 chr12 105830921 105831131 + 10.4 0.000 Intergenic L1MCc|LINE|L1 124252 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr10-5947 chr10 122089299 122089509 + 10.4 0.000 intron (NM_001291877, intron 5 of 19) intron (NM_001291877, intron 5 of 19) -23481 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr1-6264 chr1 241114959 241115169 + 10.4 0.000 intron (NM_001282778, intron 2 of 16) LTR24C|LTR|ERV1 -17208 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr11-2094 chr11 108115268 108115478 + 10.4 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -6194 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chrX-1623 chrX 115393276 115393486 + 10.4 0.000 Intergenic Intergenic 103666 NM_016383 51213 Hs.242183 NM_016383 ENSG00000102021 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding chr2-6818 chr2 60634548 60634758 + 10.4 0.000 Intergenic Intergenic -80999 NM_022893 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr8-2412 chr8 81457908 81458118 + 10.4 0.000 TTS (NM_001080526) TTS (NM_001080526) 3510 NM_001080526 646480 Hs.653176 NM_001080526 ENSG00000205186 FABP9 PERF|PERF15|T-FABP|TLBP fatty acid binding protein 9 protein-coding chr1-7609 chr1 1490964 1491174 + 10.4 0.000 intron (NM_031921, intron 15 of 15) intron (NM_031921, intron 15 of 15) 13220 NM_001317238 83858 Hs.729021 NM_031921 ENSG00000160072 ATAD3B AAA-TOB3|TOB3 ATPase family AAA domain containing 3B protein-coding chr4-2049 chr4 10006304 10006514 + 10.4 0.000 intron (NM_001001290, intron 3 of 12) intron (NM_001001290, intron 3 of 12) 15088 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr2-4878 chr2 113034951 113035161 + 10.4 0.000 intron (NM_173178, intron 1 of 4) intron (NM_173178, intron 1 of 4) 17811 NM_173178 27177 Hs.278909 NM_014438 ENSG00000136696 IL36B FIL1|FIL1-(ETA)|FIL1H|FILI-(ETA)|IL-1F8|IL-1H2|IL1-ETA|IL1F8|IL1H2 interleukin 36 beta protein-coding chr3-6871 chr3 151933564 151933774 + 10.4 0.000 Intergenic Intergenic -5494 NR_110202 101928142 Hs.680207 NR_110202 AADACL2-AS1 - AADACL2 antisense RNA 1 ncRNA chr7-8382 chr7 44873938 44874148 + 10.4 0.000 Intergenic Intergenic 7757 NR_039801 100616393 NR_039801 ENSG00000284261 MIR4657 mir-4657 microRNA 4657 ncRNA chr14-3156 chr14 69187242 69187452 + 10.4 0.000 Intergenic L1MC2|LINE|L1 -4130 NM_001193360 55218 Hs.533878 NM_018199 ENSG00000081177 EXD2 C14orf114|EXDL2 exonuclease 3'-5' domain containing 2 protein-coding chr8-3771 chr8 24611397 24611607 + 10.4 0.000 Intergenic L2c|LINE|L2 -62884 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr4-2376 chr4 10582107 10582317 + 10.4 0.000 intron (NM_052964, intron 4 of 18) intron (NM_052964, intron 4 of 18) 102556 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr11-8304 chr11 74108718 74108928 + 10.4 0.000 intron (NM_001286577, intron 12 of 32) MIRb|SINE|MIR 62179 NM_015531 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 domain containing 3 centriole elongation regulator protein-coding chr1-7044 chr1 178134128 178134338 + 10.4 0.000 intron (NM_170692, intron 1 of 17) MLT1F1|LTR|ERVL-MaLR 40129 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr7-4148 chr7 80542521 80542731 + 10.4 0.000 Intergenic (TTGCCTA)n|Simple_repeat|Simple_repeat -30562 NM_001102386 346562 Hs.335049 NM_001102386 ENSG00000214415 GNAT3 GDCA G protein subunit alpha transducin 3 protein-coding chr13-527 chr13 110307173 110307383 + 10.4 0.000 promoter-TSS (NM_001303110) promoter-TSS (NM_001303110) -6 NM_001846 1284 Hs.508716 NM_001846 ENSG00000134871 COL4A2 BSVD2|ICH|POREN2 collagen type IV alpha 2 chain protein-coding chr15-1674 chr15 43550774 43550984 + 10.4 0.000 intron (NM_001130858, intron 29 of 30) L1MB5|LINE|L1 33271 NM_002373 4130 Hs.194301 NM_002373 ENSG00000166963 MAP1A MAP1L|MTAP1A microtubule associated protein 1A protein-coding chr6-5237 chr6 135966459 135966669 + 10.4 0.000 intron (NM_018945, intron 2 of 12) MER91C|DNA|hAT-Tip100 106263 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr19-4554 chr19 10489138 10489348 + 10.4 0.000 exon (NM_203500, exon 5 of 6) exon (NM_203500, exon 5 of 6) 13528 NM_012289 9817 Hs.465870 NM_012289 ENSG00000079999 KEAP1 INrf2|KLHL19 kelch like ECH associated protein 1 protein-coding chr10-5377 chr10 74039853 74040063 + 10.4 0.000 intron (NM_014000, intron 1 of 21) L2c|LINE|L2 41842 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr3-9700 chr3 65577935 65578145 + 10.4 0.000 intron (NM_001365904, intron 2 of 24) intron (NM_001365904, intron 2 of 24) -315776 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr15-4060 chr15 67796658 67796868 + 10.4 0.000 intron (NM_001206804, intron 21 of 21) MLT1J|LTR|ERVL-MaLR -28746 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr5-4199 chr5 114321541 114321751 + 10.4 0.000 Intergenic Intergenic -40424 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr22-1174 chr22 37590385 37590595 + 10.4 0.000 Intergenic L1MB4|LINE|L1 -10403 NM_006498 3957 Hs.531776 NM_006498 ENSG00000100079 LGALS2 HL14 galectin 2 protein-coding chr16-1966 chr16 74807679 74807889 + 10.4 0.000 Intergenic MER52C|LTR|ERV1 -32964 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr5-5713 chr5 167830510 167830720 + 10.4 0.000 intron (NM_001080428, intron 1 of 24) L2c|LINE|L2 75686 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr4-2215 chr4 138910606 138910816 + 10.4 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 101935 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr14-1321 chr14 69540123 69540333 + 10.4 0.000 Intergenic Kanga1b|DNA|TcMar-Tc2 34643 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr19-3281 chr19 3305146 3305356 + 10.4 0.000 Intergenic Intergenic -54379 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr20-4058 chr20 37923941 37924151 + 10.4 0.000 intron (NM_080607, intron 1 of 3) AluJo|SINE|Alu 20919 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr11-3280 chr11 81165282 81165492 + 10.4 0.000 Intergenic Intergenic -402584 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr6-4570 chr6 42901676 42901886 + 10.4 0.000 Intergenic HERVK-int|LTR|ERVK -10960 NM_001008739 441150 Hs.571098 NM_001008739 ENSG00000221821 C6orf226 - chromosome 6 open reading frame 226 protein-coding chr12-2614 chr12 123479952 123480162 + 10.4 0.000 intron (NM_001319243, intron 6 of 7) intron (NM_001319243, intron 6 of 7) 20353 NM_180699 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chr10-4227 chr10 123795889 123796099 + 10.4 0.000 intron (NM_198148, intron 6 of 13) intron (NM_198148, intron 6 of 13) 95813 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr10-3527 chr10 72927375 72927585 + 10.4 0.000 intron (NM_152635, intron 7 of 8) Tigger15a|DNA|TcMar-Tigger 27326 NM_001318124 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chr13-1602 chr13 44758890 44759100 + 10.4 0.000 Intergenic Intergenic 50635 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr19-2036 chr19 2478766 2478976 + 10.4 0.000 TTS (NM_015675) TTS (NM_015675) 2744 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr6-3141 chr6 109486046 109486256 + 10.4 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -2914 NM_014797 9841 Hs.409876 NM_014797 ENSG00000112365 ZBTB24 BIF1|ICF2|PATZ2|ZNF450 zinc finger and BTB domain containing 24 protein-coding chr11-6929 chr11 110578068 110578278 + 10.4 0.000 3' UTR (NM_001258417, exon 15 of 15) 3' UTR (NM_001258417, exon 15 of 15) 133652 NM_001258415 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr14-4572 chr14 48525078 48525288 + 10.4 0.000 Intergenic L2b|LINE|L2 -730169 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr3-3598 chr3 70716969 70717179 + 10.4 0.000 Intergenic UCON4|Unknown|Unknown 347850 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr10-4600 chr10 114116283 114116493 + 10.4 0.000 Intergenic Intergenic 57791 NR_031747 100302224 NR_031747 ENSG00000284442 MIR2110 hsa-mir-2110|mir-2110 microRNA 2110 ncRNA chr17-3607 chr17 893405 893615 + 10.4 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -16122 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr12-4117 chr12 64598393 64598603 + 10.4 0.000 Intergenic Intergenic -11997 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr18-3210 chr18 46518404 46518614 + 10.4 0.000 intron (NM_144612, intron 32 of 39) intron (NM_144612, intron 32 of 39) 577 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr6-6231 chr6 21768323 21768533 + 10.4 0.000 intron (NR_015410, intron 2 of 11) intron (NR_015410, intron 2 of 11) 102015 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr2-2397 chr2 20131097 20131307 + 10.4 0.000 Intergenic Intergenic -79574 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr6-5769 chr6 166098069 166098279 + 10.4 0.000 non-coding (NR_147704, exon 1 of 2) non-coding (NR_147704, exon 1 of 2) 454 NR_147704 729681 Hs.520550 NR_147704 LOC729681 - uncharacterized LOC729681 ncRNA chr12-3243 chr12 58668792 58669002 + 10.4 0.000 intron (NR_120452, intron 1 of 7) L1MDa|LINE|L1 77195 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr3-6541 chr3 119147096 119147306 + 10.4 0.000 exon (NM_152539, exon 1 of 3) exon (NM_152539, exon 1 of 3) 1036 NM_152539 152405 Hs.730099 NM_152539 ENSG00000163424 TEX55 C3orf30|TSCPA testis expressed 55 protein-coding chr10-578 chr10 133378804 133379014 + 10.4 0.000 promoter-TSS (NM_152911) promoter-TSS (NM_152911) -353 NR_109766 196743 Hs.501578 NM_152911 ENSG00000148832 PAOX PAO polyamine oxidase protein-coding chr15-3329 chr15 80317983 80318193 + 10.4 0.000 intron (NR_033833, intron 1 of 2) MLT1A0|LTR|ERVL-MaLR 23717 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA chr15-3317 chr15 79214129 79214339 + 10.4 0.000 intron (NR_038997, intron 1 of 1) MIR|SINE|MIR 4446 NR_029705 406960 NR_029705 ENSG00000207695 MIR184 EDICT|MIRN184|miR-184 microRNA 184 ncRNA chr1-11208 chr1 244445794 244446004 + 10.4 0.000 intron (NM_001365073, intron 1 of 12) intron (NM_001365073, intron 1 of 12) 6010 NM_001126 159 Hs.498313 NM_001126 ENSG00000035687 ADSS ADEH|ADSS 2|ADSS2 adenylosuccinate synthase protein-coding chr3-6076 chr3 51976974 51977184 + 10.4 0.000 intron (NM_001316331, intron 1 of 16) intron (NM_001316331, intron 1 of 16) 2015 NM_015407 25864 Hs.534400 NM_015407 ENSG00000248487 ABHD14A DORZ1 abhydrolase domain containing 14A protein-coding chr17-4073 chr17 79087547 79087757 + 10.4 0.000 3' UTR (NM_001042573, exon 14 of 14) 3' UTR (NM_001042573, exon 14 of 14) 12715 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr17-5735 chr17 58180683 58180893 + 10.4 0.000 Intergenic LTR16B|LTR|ERVL 11132 NM_001004707 124538 Hs.446879 NM_001004707 ENSG00000255713 OR4D2 BC2009|OR17-24 olfactory receptor family 4 subfamily D member 2 protein-coding chr18-3298 chr18 54267135 54267345 + 10.4 0.000 Intergenic AluSz|SINE|Alu -2239 NM_001351610 11201 Hs.438533 NM_007195 ENSG00000101751 POLI RAD30B|RAD3OB|eta2 DNA polymerase iota protein-coding chr17-5331 chr17 28534227 28534437 + 10.4 0.000 exon (NM_003593, exon 6 of 8) exon (NM_003593, exon 6 of 8) 10391 NM_003593 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chr7-9180 chr7 115404275 115404485 + 10.4 0.000 Intergenic L1PA16|LINE|L1 -173025 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr10-5684 chr10 99579760 99579970 + 10.4 0.000 Intergenic Intergenic 40574 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding chr8-5271 chr8 139023307 139023517 + 10.4 0.000 Intergenic Intergenic -109371 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr7-5401 chr7 33909899 33910109 + 10.4 0.000 intron (NM_133468, intron 3 of 15) intron (NM_133468, intron 3 of 15) 4465 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr6-2064 chr6 113184282 113184492 + 10.4 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 249060 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr2-9532 chr2 238768613 238768823 + 10.4 0.000 Intergenic L1MEc|LINE|L1 79189 NR_157851 100287387 Hs.516864 NR_157851 LOC100287387 - uncharacterized LOC100287387 ncRNA chr10-7550 chr10 15379217 15379427 + 10.4 0.000 Intergenic LTR67B|LTR|ERVL -8033 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr2-11364 chr2 208868034 208868244 + 10.4 0.000 Intergenic L1MDb|LINE|L1 325497 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr2-7438 chr2 11271198 11271408 + 10.4 0.000 intron (NM_001321643, intron 3 of 32) L1MCa|LINE|L1 73333 NM_004850 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr12-4604 chr12 38481391 38481601 + 10.4 0.000 Intergenic Intergenic 164722 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr2-5489 chr2 136384854 136385064 + 10.4 0.000 Intergenic Intergenic -266804 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr3-4031 chr3 69329955 69330165 + 10.4 0.000 intron (NM_015123, intron 1 of 22) L2a|LINE|L2 56028 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr18-1565 chr18 31628664 31628874 + 10.4 0.000 intron (NM_001330570, intron 5 of 7) intron (NM_001330570, intron 5 of 7) 37002 NM_000371 7276 Hs.427202 NM_000371 ENSG00000118271 TTR ATTR|CTS|CTS1|HEL111|HsT2651|PALB|TBPA transthyretin protein-coding chr7-5658 chr7 56205800 56206010 + 10.4 0.000 Intergenic MamRep605|LTR?|LTR? -89488 NM_001145712 389493 Hs.177948 NM_001145712 ENSG00000185290 NUPR2 NUPR1L nuclear protein 2, transcriptional regulator protein-coding chr11-3911 chr11 119460648 119460858 + 10.4 0.000 intron (NR_034160, intron 2 of 3) intron (NR_034160, intron 2 of 3) -35768 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr14-1553 chr14 68248534 68248744 + 10.4 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 380148 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr18-1021 chr18 59484651 59484861 + 10.4 0.000 intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) -125491 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr12-3562 chr12 8662847 8663057 + 10.4 0.000 promoter-TSS (NM_001297710) promoter-TSS (NM_001297710) -126 NM_001297712 8076 Hs.512842 NM_003480 ENSG00000197614 MFAP5 AAT9|MAGP-2|MAGP2|MFAP-5|MP25 microfibril associated protein 5 protein-coding chr3-2414 chr3 194474588 194474798 + 10.4 0.000 intron (NM_001367549, intron 2 of 33) intron (NM_001367549, intron 2 of 33) -6454 NM_024524 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr14-3358 chr14 91116261 91116471 + 10.4 0.000 intron (NM_001286471, intron 1 of 13) MIRc|SINE|MIR 1666 NM_001286471 80017 Hs.309849 NM_024952 ENSG00000133943 DGLUCY C14orf159 D-glutamate cyclase protein-coding chr9-5641 chr9 121242577 121242787 + 10.4 0.000 intron (NM_001353053, intron 6 of 25) MLT1L|LTR|ERVL-MaLR -25480 NM_001353059 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr6-3408 chr6 85625763 85625973 + 10.4 0.000 intron (NM_001159676, intron 5 of 10) MER20|DNA|hAT-Charlie 15583 NM_001159675 10492 Hs.571177 NM_006372 ENSG00000135316 SYNCRIP GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q synaptotagmin binding cytoplasmic RNA interacting protein protein-coding chr5-5303 chr5 126443142 126443352 + 10.4 0.000 intron (NR_146196, intron 1 of 14) MER5A|DNA|hAT-Charlie 19838 NR_146195 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr11-3583 chr11 62627774 62627984 + 10.4 0.000 intron (NM_001329224, intron 17 of 23) intron (NM_001329224, intron 17 of 23) -5704 NR_109991 26229 Hs.502759 NM_012200 ENSG00000149541 B3GAT3 GLCATI|JDSCD|glcUAT-I beta-1,3-glucuronyltransferase 3 protein-coding chr6-7332 chr6 45935303 45935513 + 10.4 0.000 intron (NR_045673, intron 1 of 4) intron (NR_045673, intron 1 of 4) 2189 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr3-5677 chr3 13210824 13211034 + 10.4 0.000 Intergenic Intergenic -137500 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr1-9977 chr1 81359902 81360112 + 10.4 0.000 intron (NM_001366003, intron 2 of 27) L2a|LINE|L2 53612 NM_001366008 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr10-7963 chr10 57023147 57023357 + 10.4 0.000 Intergenic L1MC3|LINE|L1 281307 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr2-13977 chr2 189554066 189554276 + 10.4 0.000 Intergenic HAL1ME|LINE|L1 26640 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr18-1775 chr18 10739254 10739464 + 10.4 0.000 intron (NM_022068, intron 31 of 51) intron (NM_022068, intron 31 of 51) 20290 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr19-4915 chr19 42508888 42509098 + 10.4 0.000 3' UTR (NM_001184816, exon 7 of 7) 3' UTR (NM_001184816, exon 7 of 7) 19488 NM_001184813 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr5-5396 chr5 135111317 135111527 + 10.4 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -71375 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr11-3260 chr11 74534875 74535085 + 10.4 0.000 Intergenic LTR2B|LTR|ERV1 -41256 NM_001144869 387787 Hs.591971 NM_001144869 ENSG00000175536 LIPT2 - lipoyl(octanoyl) transferase 2 protein-coding chr3-3461 chr3 161415868 161416078 + 10.4 0.000 Intergenic Intergenic -10454 NR_102265 101243545 Hs.737526 NR_102265 ENSG00000240567 LINC02067 - long intergenic non-protein coding RNA 2067 ncRNA chr10-5850 chr10 113872080 113872290 + 10.4 0.000 intron (NM_198514, intron 2 of 10) L1MC4|LINE|L1 17524 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding chr16-3915 chr16 83727008 83727218 + 10.4 0.000 intron (NM_001220489, intron 9 of 12) L1MB8|LINE|L1 76863 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr4-2277 chr4 187276866 187277076 + 10.4 0.000 Intergenic Intergenic 74985 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr22-940 chr22 46519253 46519463 + 10.4 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 18262 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr6-4587 chr6 43673449 43673659 + 10.4 0.000 TTS (NM_152732) TTS (NM_152732) 14258 NM_001193343 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr14-1430 chr14 73269819 73270029 + 10.4 0.000 intron (NM_001365907, intron 25 of 25) intron (NM_001365907, intron 25 of 25) -23923 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr1-10549 chr1 171817783 171817993 + 10.4 0.000 Intergenic Intergenic -23610 NM_001350206 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chr15-2053 chr15 57133407 57133617 + 10.4 0.000 intron (NM_207038, intron 5 of 19) intron (NM_207038, intron 5 of 19) -85918 NM_001306220 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr2-4343 chr2 240643724 240643934 + 10.4 0.000 Intergenic Intergenic 18584 NM_005301 2859 Hs.112218 NM_005301 ENSG00000178623 GPR35 - G protein-coupled receptor 35 protein-coding chr3-2163 chr3 148697794 148698004 + 10.4 0.000 promoter-TSS (NM_031850) promoter-TSS (NM_031850) 28 NM_031850 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr15-2436 chr15 73908255 73908465 + 10.4 0.000 Intergenic Intergenic -18102 NM_005576 4016 Hs.65436 NM_005576 ENSG00000129038 LOXL1 LOL|LOXL lysyl oxidase like 1 protein-coding chr7-4421 chr7 105188770 105188980 + 10.4 0.000 intron (NM_182692, intron 3 of 15) intron (NM_182692, intron 3 of 15) 80202 NM_001350739 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr4-8396 chr4 151331661 151331871 + 10.4 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 54593 NM_001353611 345062 Hs.651266 NM_183375 ENSG00000189099 PRSS48 ESSPL serine protease 48 protein-coding chr6-4688 chr6 54682093 54682303 + 10.4 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -164573 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr6-4632 chr6 47083638 47083848 + 10.4 0.000 Intergenic Intergenic -41411 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr13-2151 chr13 107842721 107842931 + 10.4 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) -7368 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA chr12-3519 chr12 131222802 131223012 + 10.4 0.000 Intergenic Intergenic 57896 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA chr22-1540 chr22 29980084 29980294 + 10.4 0.000 intron (NM_153051, intron 5 of 18) intron (NM_153051, intron 5 of 18) -26860 NR_106876 102466742 NR_106876 ENSG00000275818 MIR6818 hsa-mir-6818 microRNA 6818 ncRNA chr3-3317 chr3 185089462 185089672 + 10.4 0.000 intron (NM_001025266, intron 1 of 1) intron (NM_001025266, intron 1 of 1) 63493 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr19-4075 chr19 12088968 12089178 + 10.4 0.000 Intergenic Intergenic -3224 NM_001348165 388507 Hs.127473 NM_001004314 ZNF788P ZNF788 zinc finger family member 788, pseudogene protein-coding chr17-3771 chr17 34446885 34447095 + 10.4 0.000 Intergenic Intergenic -83757 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr3-8445 chr3 119705499 119705709 + 10.4 0.000 intron (NM_001320316, intron 1 of 17) L2a|LINE|L2 2582 NM_001320318 89876 Hs.341906 NM_033364 ENSG00000183833 MAATS1 AAT1|AAT1alpha|C3orf15|CFAP91|CaM-IP2|SPATA26 MYCBP associated and testis expressed 1 protein-coding chr13-4392 chr13 109345749 109345959 + 10.4 0.000 Intergenic L3|LINE|CR1 -54842 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr13-2828 chr13 106219958 106220168 + 10.4 0.000 Intergenic Intergenic -156501 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr14-3194 chr14 72457752 72457962 + 10.4 0.000 intron (NM_001370288, intron 4 of 16) intron (NM_001370288, intron 4 of 16) -58963 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr2-1753 chr2 74958807 74959017 + 10.4 0.000 intron (NM_019896, intron 1 of 3) CpG 269 NM_019896 56655 Hs.469060 NM_019896 ENSG00000115350 POLE4 YHHQ1|p12 DNA polymerase epsilon 4, accessory subunit protein-coding chr4-1610 chr4 53309296 53309506 + 10.4 0.000 intron (NM_152540, intron 3 of 8) intron (NM_152540, intron 3 of 8) 56660 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr12-6727 chr12 5608595 5608805 + 10.4 0.000 intron (NM_001278596, intron 20 of 25) intron (NM_001278596, intron 20 of 25) 114568 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr16-1949 chr16 19948005 19948215 + 10.4 0.000 Intergenic AluSx1|SINE|Alu -62476 NM_001304771 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chr16-3146 chr16 74866416 74866626 + 10.4 0.000 Intergenic LTR8A|LTR|ERV1 -91701 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr2-5823 chr2 232646935 232647145 + 10.4 0.000 intron (NM_001308395, intron 2 of 4) intron (NM_001308395, intron 2 of 4) 13436 NM_025202 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr1-16338 chr1 218220974 218221184 + 10.4 0.000 Intergenic Tigger5b|DNA|TcMar-Tigger -64214 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chrX-1975 chrX 10901448 10901658 + 10.4 0.000 Intergenic Intergenic -67870 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr12-7532 chr12 69873510 69873720 + 10.4 0.000 intron (NM_182530, intron 2 of 24) Tigger7|DNA|TcMar-Tigger 48388 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr7-8380 chr7 44639302 44639512 + 10.4 0.000 intron (NM_002541, intron 2 of 22) intron (NM_002541, intron 2 of 22) 32780 NM_001003941 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr19-5935 chr19 51178800 51179010 + 10.4 0.000 intron (NR_110732, intron 1 of 4) intron (NR_110732, intron 1 of 4) 3061 NR_110732 101928517 Hs.707693 NR_110732 ENSG00000269072 LOC101928517 - uncharacterized LOC101928517 ncRNA chr10-5012 chr10 32897548 32897758 + 10.4 0.000 Intergenic Intergenic 3819 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr12-4043 chr12 49086211 49086421 + 10.4 0.000 TTS (NM_021044) TTS (NM_021044) 8485 NM_021044 50846 Hs.524382 NM_021044 ENSG00000139549 DHH GDXYM|HHG-3|SRXY7 desert hedgehog signaling molecule protein-coding chr17-8459 chr17 77606483 77606693 + 10.4 0.000 Intergenic Intergenic 59647 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr14-1944 chr14 24722331 24722541 + 10.4 0.000 Intergenic LTR79|LTR|ERVL -88246 NR_144343 3002 Hs.1051 NM_004131 ENSG00000100453 GZMB C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B protein-coding chr19-3521 chr19 42002533 42002743 + 10.4 0.000 intron (NM_001301030, intron 18 of 18) L2|LINE|L2 -8408 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr6-6735 chr6 2321638 2321848 + 10.4 0.000 intron (NR_046229, intron 3 of 6) L1M4c|LINE|L1 75990 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chrX-863 chrX 141827717 141827927 + 10.4 0.000 Intergenic L2a|LINE|L2 -10494 NM_138702 139081 Hs.356870 NM_138702 ENSG00000165509 MAGEC3 CT7.2|HCA2|MAGE-C3|MAGEC4 MAGE family member C3 protein-coding chr1-9209 chr1 22316287 22316497 + 10.4 0.000 Intergenic Intergenic 50153 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr22-1027 chr22 32079091 32079301 + 10.4 0.000 intron (NM_000343, intron 5 of 14) intron (NM_000343, intron 5 of 14) 20026 NM_001256314 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr1-2143 chr1 3657753 3657963 + 10.4 0.000 intron (NM_001204185, intron 1 of 12) intron (NM_001204185, intron 1 of 12) 5293 NM_001204187 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr3-6783 chr3 143090710 143090920 + 10.4 0.000 Intergenic Intergenic -28956 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chrX-1367 chrX 150469124 150469334 + 10.4 0.000 intron (NM_005491, intron 2 of 6) intron (NM_005491, intron 2 of 6) 23775 NM_005491 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr9-5206 chr9 73352064 73352274 + 10.4 0.000 Intergenic L1MEc|LINE|L1 200304 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr3-3418 chr3 101292131 101292341 + 10.4 0.000 intron (NM_016247, intron 3 of 18) L2c|LINE|L2 28339 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr18-1302 chr18 67418086 67418296 + 10.4 0.000 Intergenic Intergenic -98355 NR_033921 643542 Hs.652901 NR_033921 ENSG00000265533 LOC643542 - uncharacterized LOC643542 ncRNA chr8-1775 chr8 67038750 67038960 + 10.4 0.000 Intergenic Intergenic -10301 NM_001364911 286187 Hs.583933 NM_001013626 ENSG00000178125 PPP1R42 LRRC67|TLLR|TLRR|dtr protein phosphatase 1 regulatory subunit 42 protein-coding chr5-5530 chr5 144843728 144843938 + 10.4 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 638442 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr4-5226 chr4 168522472 168522682 + 10.4 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) 25525 NM_016081 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr2-3755 chr2 6879036 6879246 + 10.4 0.000 intron (NM_080657, intron 1 of 5) L1ME3A|LINE|L1 1364 NM_080657 91543 Hs.17518 NM_080657 ENSG00000134321 RSAD2 2510004L01Rik|cig33|cig5|vig1 radical S-adenosyl methionine domain containing 2 protein-coding chr5-4345 chr5 166263989 166264199 + 10.4 0.000 Intergenic Intergenic 662276 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr1-13213 chr1 210043650 210043860 + 10.4 0.000 intron (NM_153262, intron 4 of 7) L2|LINE|L2 105538 NM_001146264 255928 Hs.658866 NM_153262 ENSG00000143469 SYT14 SCAR11|sytXIV synaptotagmin 14 protein-coding chr8-905 chr8 103980520 103980730 + 10.4 0.000 intron (NR_145711, intron 13 of 21) L1MA2|LINE|L1 161405 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr18-3416 chr18 63067559 63067769 + 10.4 0.000 Intergenic L1ME2|LINE|L1 251716 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chrX-809 chrX 70506296 70506506 + 10.4 0.000 TTS (NM_021120) TTS (NM_021120) -50407 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr7-3013 chr7 65252460 65252670 + 10.4 0.000 Intergenic Intergenic 111535 NR_146906 285905 Hs.567827 NM_182596 ENSG00000164669 INTS4P1 INTS4L1 integrator complex subunit 4 pseudogene 1 pseudo chr5-4822 chr5 60241395 60241605 + 10.4 0.000 intron (NM_001364599, intron 1 of 16) AluSx|SINE|Alu 131163 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-10320 chr1 151888958 151889168 + 10.4 0.000 intron (NM_053055, intron 3 of 5) L1ME4a|LINE|L1 20448 NM_053055 117145 Hs.164070 NM_053055 ENSG00000159445 THEM4 CTMP thioesterase superfamily member 4 protein-coding chr2-2869 chr2 173590036 173590246 + 10.4 0.000 Intergenic Intergenic 235269 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr6-6155 chr6 2548218 2548428 + 10.4 0.000 Intergenic LTR8B|LTR|ERV1 -86177 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr3-9139 chr3 31917511 31917721 + 10.4 0.000 intron (NM_001174060, intron 1 of 10) intron (NM_001174060, intron 1 of 10) -64134 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr17-6180 chr17 82773549 82773759 + 10.4 0.000 intron (NM_005993, intron 6 of 38) intron (NM_005993, intron 6 of 38) 21589 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr11-3607 chr11 67524460 67524670 + 10.4 0.000 Intergenic Intergenic -1119 NM_016366 51475 Hs.278984 NM_016366 ENSG00000167791 CABP2 DFNB93 calcium binding protein 2 protein-coding chr8-4617 chr8 132120545 132120755 + 10.4 0.000 TTS (NM_004519) TTS (NM_004519) -15385 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr15-1656 chr15 100350161 100350371 + 10.4 0.000 promoter-TSS (NR_028140) promoter-TSS (NR_028140) -33 NR_028140 388182 Hs.136982 NM_207383 ENSG00000189419 SPATA41 HSD47 spermatogenesis associated 41 ncRNA chr9-2903 chr9 133903300 133903510 + 10.4 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 88919 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr10-3189 chr10 91043454 91043664 + 10.4 0.000 Intergenic Intergenic -2249 NR_047467 100874184 Hs.512240 NR_047467 LINC00502 - long intergenic non-protein coding RNA 502 ncRNA chr9-5003 chr9 22966635 22966845 + 10.4 0.000 Intergenic MER57A-int|LTR|ERV1 320540 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr1-5216 chr1 184514124 184514334 + 10.4 0.000 intron (NM_030806, intron 3 of 5) AluJr|SINE|Alu 127200 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr7-4961 chr7 146709416 146709626 + 10.4 0.000 Intergenic Intergenic -64750 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr15-2341 chr15 33324655 33324865 + 10.4 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 13793 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr14-5337 chr14 102830124 102830334 + 10.4 0.000 intron (NM_001199427, intron 1 of 7) intron (NM_001199427, intron 1 of 7) 52750 NM_145726 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr8-2803 chr8 123620254 123620464 + 10.4 0.000 Intergenic Intergenic 33442 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chrX-680 chrX 17520274 17520484 + 10.4 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -8056 NR_135631 101928389 Hs.686933 NR_135631 ENSG00000235834 LOC101928389 - uncharacterized LOC101928389 ncRNA chr3-10822 chr3 163405578 163405788 + 10.4 0.000 Intergenic LTR48B|LTR|ERV1 -102382 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr1-8426 chr1 92053031 92053241 + 10.4 0.000 intron (NM_173567, intron 6 of 6) L2b|LINE|L2 22336 NM_001287737 646817 NM_001287737 ENSG00000230667 SETSIP SETP18 SET like protein protein-coding chr14-1630 chr14 103735861 103736071 + 10.4 0.000 intron (NM_015316, intron 16 of 16) intron (NM_015316, intron 16 of 16) 20222 NM_024071 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr5-5604 chr5 151634185 151634395 + 10.4 0.000 Intergenic Intergenic -42655 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr8-3709 chr8 19868160 19868370 + 10.4 0.000 Intergenic Intergenic 50849 NM_018142 55174 Hs.512627 NM_018142 ENSG00000104613 INTS10 C8orf35|INT10 integrator complex subunit 10 protein-coding chr6-7516 chr6 65396310 65396520 + 10.4 0.000 intron (NM_198283, intron 6 of 9) L2|LINE|L2 94997 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr13-1694 chr13 80100664 80100874 + 10.4 0.000 Intergenic Intergenic 89692 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr16-4441 chr16 53363145 53363355 + 10.4 0.000 Intergenic Intergenic 7962 NM_001347693 643802 Hs.451336 NM_001207030 LOC643802 - u3 small nucleolar ribonucleoprotein protein MPP10-like protein-coding chr6-4241 chr6 6444704 6444914 + 10.4 0.000 intron (NR_026970, intron 3 of 7) MLT1D|LTR|ERVL-MaLR -124118 NM_000129 2162 Hs.335513 NM_000129 ENSG00000124491 F13A1 F13A coagulation factor XIII A chain protein-coding chr1-9468 chr1 36106786 36106996 + 10.4 0.000 intron (NM_005202, intron 2 of 3) intron (NM_005202, intron 2 of 3) 17999 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr10-7418 chr10 5242198 5242408 + 10.4 0.000 Intergenic L2a|LINE|L2 28933 NR_149060 110806285 NR_149060 ENSG00000224034 LINC02561 - long intergenic non-protein coding RNA 2561 ncRNA chr3-3533 chr3 42061768 42061978 + 10.4 0.000 Intergenic Intergenic -25327 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr12-3484 chr12 122282901 122283111 + 10.4 0.000 intron (NM_198240, intron 19 of 23) intron (NM_198240, intron 19 of 23) -16512 NM_001351021 65082 Hs.487883 NM_022916 ENSG00000139719 VPS33A MPSPS VPS33A core subunit of CORVET and HOPS complexes protein-coding chr14-3243 chr14 76348943 76349153 + 10.4 0.000 Intergenic Intergenic -22299 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr1-9214 chr1 22398547 22398757 + 10.4 0.000 Intergenic L2a|LINE|L2 -53199 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr2-10116 chr2 63032103 63032313 + 10.4 0.000 intron (NM_001142615, intron 19 of 22) L1PA5|LINE|L1 15503 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr14-2598 chr14 53735211 53735421 + 10.4 0.000 Intergenic Intergenic 213168 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr1-10564 chr1 173686259 173686469 + 10.4 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 -16513 NM_198493 339416 Hs.130054 NM_198493 ENSG00000183831 ANKRD45 CT117 ankyrin repeat domain 45 protein-coding chr19-2502 chr19 10310400 10310610 + 10.4 0.000 promoter-TSS (NM_001103167) promoter-TSS (NM_001103167) -948 NM_001103167 100125288 Hs.709296 NM_001103167 ENSG00000220201 ZGLP1 GATAD3|GLP-1|GLP1 zinc finger GATA like protein 1 protein-coding chr18-1534 chr18 11394870 11395080 + 10.4 0.000 Intergenic Intergenic -59503 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr22-1427 chr22 44089094 44089304 + 10.4 0.000 intron (NM_001243385, intron 1 of 12) intron (NM_001243385, intron 1 of 12) 20082 NM_001243385 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr12-2179 chr12 2833084 2833294 + 10.4 0.000 TTS (NR_130744) TTS (NR_130744) 1846 NM_031474 83714 Hs.530816 NM_031474 ENSG00000053702 NRIP2 - nuclear receptor interacting protein 2 protein-coding chr1-10116 chr1 100459588 100459798 + 10.4 0.000 intron (NM_001319211, intron 8 of 14) intron (NM_001319211, intron 8 of 14) -78446 NM_022049 54112 Hs.170053 NM_022049 ENSG00000181656 GPR88 COCPMR|STRG G protein-coupled receptor 88 protein-coding chr2-3073 chr2 108324835 108325045 + 10.4 0.000 intron (NR_037191, intron 1 of 3) intron (NR_037191, intron 1 of 3) 2702 NR_037191 151234 Hs.447681 NR_037191 ENSG00000237223 SULT1C2P1 SULT1C1P sulfotransferase family 1C member 2 pseudogene 1 pseudo chr7-5332 chr7 27662005 27662215 + 10.4 0.000 intron (NM_152740, intron 1 of 7) intron (NM_152740, intron 1 of 7) 773 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding chr6-3249 chr6 147414533 147414743 + 10.4 0.000 Intergenic L1MD2|LINE|L1 -94052 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr11-3562 chr11 45236003 45236213 + 10.4 0.000 TTS (NM_001256695) TTS (NM_001256695) 50233 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr4-2602 chr4 130712077 130712287 + 10.4 0.000 Intergenic Intergenic 335821 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr7-9292 chr7 126798084 126798294 + 10.4 0.000 intron (NM_001371085, intron 6 of 10) intron (NM_001371085, intron 6 of 10) 259995 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr12-5787 chr12 12715726 12715936 + 10.4 0.000 Intergenic MIR3|SINE|MIR -1439 NM_004064 1027 Hs.238990 NM_004064 ENSG00000111276 CDKN1B CDKN4|KIP1|MEN1B|MEN4|P27KIP1 cyclin dependent kinase inhibitor 1B protein-coding chr3-6084 chr3 52258106 52258316 + 10.4 0.000 intron (NM_025222, intron 8 of 8) intron (NM_025222, intron 8 of 8) 10150 NR_029660 406890 NR_029660 ENSG00000199150 MIRLET7G LET7G|MIRNLET7G|hsa-let-7g|let-7g microRNA let-7g ncRNA chr10-5945 chr10 122044395 122044605 + 10.4 0.000 intron (NM_206862, intron 2 of 22) intron (NM_206862, intron 2 of 22) 55337 NM_206862 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr18-1849 chr18 23791475 23791685 + 10.4 0.000 intron (NM_001127717, intron 12 of 73) AluSz|SINE|Alu -81440 NM_001127718 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr16-3938 chr16 85492812 85493022 + 10.4 0.000 Intergenic L2b|LINE|L2 -118492 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr15-1184 chr15 38068550 38068760 + 10.4 0.000 TTS (NR_147201) TTS (NR_147201) 4335 NR_147199 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr2-6262 chr2 45702570 45702780 + 10.4 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 51000 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr6-2978 chr6 40338695 40338905 + 10.4 0.000 Intergenic Intergenic 17206 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr4-935 chr4 55409518 55409728 + 10.4 0.000 intron (NR_073070, intron 2 of 6) MER20|DNA|hAT-Charlie 13666 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr1-11931 chr1 62037767 62037977 + 10.4 0.000 intron (NM_001350145, intron 29 of 43) intron (NM_001350145, intron 29 of 43) -40914 NR_036058 100422902 NR_036058 ENSG00000263908 MIR3116-1 - microRNA 3116-1 ncRNA chr12-4503 chr12 22348200 22348410 + 10.4 0.000 Intergenic LTR1B1|LTR|ERV1 -13591 NM_001304450 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr4-4850 chr4 110963790 110964000 + 10.4 0.000 Intergenic Intergenic -103248 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr19-5750 chr19 18979695 18979905 + 10.4 0.000 Intergenic AluJr|SINE|Alu -38583 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr2-12231 chr2 43730649 43730859 + 10.4 0.000 intron (NM_172069, intron 18 of 29) intron (NM_172069, intron 18 of 29) -43285 NM_016008 51626 Hs.371597 NM_015522 ENSG00000138036 DYNC2LI1 CGI-60|D2LIC|LIC3 dynein cytoplasmic 2 light intermediate chain 1 protein-coding chr3-3268 chr3 71451076 71451286 + 10.4 0.000 intron (NR_146142, intron 3 of 19) intron (NR_146142, intron 3 of 19) 90908 NR_031697 100302112 NR_031697 ENSG00000221264 MIR1284 MIRN1284|hsa-mir-1284|mir-1284 microRNA 1284 ncRNA chr9-8392 chr9 118905771 118905981 + 10.4 0.000 Intergenic L2a|LINE|L2 226205 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr20-3855 chr20 25500700 25500910 + 10.4 0.000 intron (NM_025176, intron 8 of 23) intron (NM_025176, intron 8 of 23) 84726 NM_025176 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr5-4964 chr5 78601318 78601528 + 10.4 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 47349 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr17-5605 chr17 48307351 48307561 + 10.4 0.000 non-coding (NR_131239, exon 3 of 3) non-coding (NR_131239, exon 3 of 3) 13109 NR_131239 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr17-5103 chr17 4920341 4920551 + 10.4 0.000 Intergenic AluJb|SINE|Alu -11831 NM_000173 2811 Hs.1472 NM_000173 ENSG00000185245 GP1BA BDPLT1|BDPLT3|BSS|CD42B|CD42b-alpha|DBPLT3|GP1B|GPIbA|GPIbalpha|VWDP glycoprotein Ib platelet subunit alpha protein-coding chr3-2977 chr3 78872198 78872408 + 10.4 0.000 intron (NM_002941, intron 4 of 30) intron (NM_002941, intron 4 of 30) 147156 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr12-6203 chr12 23290552 23290762 + 10.4 0.000 Intergenic L2a|LINE|L2 115021 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr1-9629 chr1 46406110 46406320 + 10.4 0.000 intron (NM_001441, intron 6 of 14) intron (NM_001441, intron 6 of 14) 11898 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr5-4227 chr5 129841501 129841711 + 10.4 0.000 Intergenic Intergenic -62859 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr7-9524 chr7 139594942 139595152 + 10.4 0.000 intron (NM_001113239, intron 12 of 14) intron (NM_001113239, intron 12 of 14) 71362 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr4-4268 chr4 23109523 23109733 + 10.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 395539 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr1-5085 chr1 110144397 110144607 + 10.4 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -5992 NM_001010898 388662 Hs.128382 NM_001010898 ENSG00000197106 SLC6A17 MRT48|NTT4 solute carrier family 6 member 17 protein-coding chr1-4203 chr1 85484305 85484515 + 10.4 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) -19251 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr7-5607 chr7 51006300 51006510 + 10.4 0.000 Intergenic Intergenic -212952 NM_001371008 chr19-3559 chr19 46160035 46160245 + 10.4 0.000 intron (NM_001002915, intron 2 of 4) intron (NM_001002915, intron 2 of 4) 11902 NM_001135113 147920 Hs.99376 NM_001002915 ENSG00000204866 IGFL2 UNQ645|VPRI645 IGF like family member 2 protein-coding chr10-1352 chr10 113678936 113679146 + 10.4 0.000 promoter-TSS (NM_033339) promoter-TSS (NM_033339) -121 NM_001267056 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding chr15-4906 chr15 77440651 77440861 + 10.4 0.000 intron (NM_001304505, intron 1 of 9) MLT1I|LTR|ERVL-MaLR 19868 NM_001304504 10363 Hs.69594 NM_018200 ENSG00000140382 HMG20A HMGX1|HMGXB1 high mobility group 20A protein-coding chr12-5159 chr12 102061143 102061353 + 10.4 0.000 exon (NM_001301107, exon 2 of 7) exon (NM_001301107, exon 2 of 7) 743 NM_016053 51019 Hs.405692 NM_016053 ENSG00000120860 WASHC3 CCDC53|CGI-116 WASH complex subunit 3 protein-coding chr2-14785 chr2 240630971 240631181 + 10.4 0.000 3' UTR (NM_001195382, exon 6 of 6) 3' UTR (NM_001195382, exon 6 of 6) 5831 NM_005301 2859 Hs.112218 NM_005301 ENSG00000178623 GPR35 - G protein-coupled receptor 35 protein-coding chr4-6269 chr4 76725890 76726100 + 10.4 0.000 intron (NM_020859, intron 3 of 10) intron (NM_020859, intron 3 of 10) 150444 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr18-1318 chr18 74316887 74317097 + 10.4 0.000 intron (NM_001174123, intron 1 of 13) intron (NM_001174123, intron 1 of 13) 1153 NM_001174123 644041 Hs.465414 NM_001174123 ENSG00000206043 C18orf63 DKFZP781G0119 chromosome 18 open reading frame 63 protein-coding chr2-9061 chr2 201233282 201233492 + 10.4 0.000 promoter-TSS (NM_001080124) promoter-TSS (NM_001080124) -56 NM_033355 841 Hs.599762 NM_001228 ENSG00000064012 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8 protein-coding chr14-3254 chr14 77426578 77426788 + 10.4 0.000 TTS (NM_022067) TTS (NM_022067) -3627 NM_001113475 122945 Hs.97556 NM_138791 ENSG00000165555 NOXRED1 C14orf148 NADP dependent oxidoreductase domain containing 1 protein-coding chr2-8255 chr2 99859245 99859455 + 10.4 0.000 intron (NM_001025108, intron 6 of 23) MER5A|DNA|hAT-Charlie 246233 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr7-8216 chr7 32399978 32400188 + 10.4 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 28141 NM_001322059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr2-5715 chr2 215476462 215476672 + 10.4 0.000 Intergenic Intergenic 22860 NR_110607 102724849 Hs.116161 NR_110607 ENSG00000225166 LOC102724849 - uncharacterized LOC102724849 ncRNA chr1-9870 chr1 65948927 65949137 + 10.4 0.000 intron (NM_002600, intron 3 of 16) ERV3-16A3_I-int|LTR|ERVL 35787 NM_001297441 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr3-10872 chr3 169323883 169324093 + 10.4 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -123879 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr16-4304 chr16 28273644 28273854 + 10.4 0.000 Intergenic L1M3|LINE|L1 -18776 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr1-8168 chr1 17582776 17582986 + 10.4 0.000 intron (NR_137287, intron 2 of 29) intron (NR_137287, intron 2 of 29) 2328 NM_001011722 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr5-3235 chr5 94508772 94508982 + 10.4 0.000 intron (NM_001145678, intron 5 of 20) intron (NM_001145678, intron 5 of 20) 109727 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr1-5831 chr1 227728893 227729103 + 10.4 0.000 intron (NR_136654, intron 1 of 3) intron (NR_136654, intron 1 of 3) 480 NR_136654 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr12-4937 chr12 69433907 69434117 + 10.4 0.000 Intergenic Intergenic -36376 NM_001042555 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding chr2-2463 chr2 101736959 101737169 + 10.4 0.000 intron (NM_145686, intron 2 of 30) intron (NM_145686, intron 2 of 30) 39357 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr6-7176 chr6 37838365 37838575 + 10.4 0.000 intron (NM_021943, intron 1 of 5) L1MB7|LINE|L1 18743 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr5-5207 chr5 114166409 114166619 + 10.4 0.000 Intergenic Intergenic -195556 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr16-772 chr16 88461085 88461295 + 10.4 0.000 intron (NM_153813, intron 1 of 9) intron (NM_153813, intron 1 of 9) -7728 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr12-7599 chr12 78591317 78591527 + 10.4 0.000 Intergenic Intergenic -231676 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr1-4836 chr1 26026066 26026276 + 10.4 0.000 intron (NM_004455, intron 1 of 10) AluJb|SINE|Alu 4396 NM_004455 2134 Hs.150956 NM_004455 ENSG00000158008 EXTL1 EXTL exostosin like glycosyltransferase 1 protein-coding chr18-633 chr18 21820439 21820649 + 10.4 0.000 intron (NM_020774, intron 12 of 20) intron (NM_020774, intron 12 of 20) 5241 NR_029675 406922 NR_029675 ENSG00000283927 MIR133A1 MIRN133A1|mir-133a-1 microRNA 133a-1 ncRNA chr16-1368 chr16 11078188 11078398 + 10.4 0.000 intron (NM_015226, intron 18 of 22) MER5B|DNA|hAT-Charlie 133729 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr3-2915 chr3 52224807 52225017 + 10.4 0.000 intron (NM_017442, intron 1 of 1) intron (NM_017442, intron 1 of 1) 1251 NM_017442 54106 Hs.87968 NM_017442 ENSG00000239732 TLR9 CD289 toll like receptor 9 protein-coding chr9-7373 chr9 17171265 17171475 + 10.4 0.000 intron (NM_001365029, intron 2 of 25) L1M3c|LINE|L1 36330 NM_017738 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr22-1760 chr22 25980069 25980279 + 10.4 0.000 intron (NM_001318245, intron 39 of 43) intron (NM_001318245, intron 39 of 43) -189288 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr18-2258 chr18 73188900 73189110 + 10.4 0.000 intron (NR_034133, intron 3 of 5) AluSx|SINE|Alu 75493 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA chr22-3786 chr22 29248847 29249057 + 10.4 0.000 intron (NM_001267895, intron 13 of 14) Tigger3b|DNA|TcMar-Tigger 19029 NR_138044 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr4-3645 chr4 20289245 20289455 + 10.4 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 37445 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr18-742 chr18 57798927 57799137 + 10.4 0.000 intron (NM_005603, intron 1 of 27) MIRb|SINE|MIR 4283 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr7-5777 chr7 76884094 76884304 + 10.4 0.000 Intergenic Intergenic -96623 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr7-6345 chr7 148945321 148945531 + 10.4 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 3938 NR_001571 6090 NR_001571 RNY5 Y5|hY5 RNA, Ro60-associated Y5 ncRNA chr7-3890 chr7 111654199 111654409 + 10.4 0.000 Intergenic Intergenic -91787 NM_001244606 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr4-8200 chr4 134560548 134560758 + 10.4 0.000 Intergenic Kanga11a|DNA|TcMar-Tc2 136785 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr16-3032 chr16 49461640 49461850 + 10.4 0.000 Intergenic Intergenic 56840 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr18-2013 chr18 42958495 42958705 + 10.4 0.000 intron (NM_001272077, intron 3 of 5) intron (NM_001272077, intron 3 of 5) 157085 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr4-3535 chr4 165600568 165600778 + 10.4 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -83966 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr20-2035 chr20 399996 400206 + 10.4 0.000 Intergenic AluSz|SINE|Alu -7949 NM_001323956 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr3-8307 chr3 61634620 61634830 + 10.4 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 73154 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr17-3641 chr17 4263192 4263402 + 10.4 0.000 intron (NR_047571, intron 1 of 23) intron (NR_047571, intron 1 of 23) 550 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chr14-3410 chr14 95907630 95907840 + 10.4 0.000 intron (NR_132398, intron 2 of 2) MER52C|LTR|ERV1 30963 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr3-5144 chr3 54180872 54181082 + 10.4 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 58425 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr18-1214 chr18 36354988 36355198 + 10.4 0.000 intron (NM_001281740, intron 1 of 28) intron (NM_001281740, intron 1 of 28) 57380 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr7-5305 chr7 25078166 25078376 + 10.4 0.000 Intergenic Intergenic 47090 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr5-3923 chr5 173440918 173441128 + 10.4 0.000 Intergenic L2a|LINE|L2 93568 NR_107023 102465862 NR_107023 ENSG00000274994 MIR8056 hsa-mir-8056 microRNA 8056 ncRNA chr16-1864 chr16 77788557 77788767 + 10.4 0.000 promoter-TSS (NM_020927) promoter-TSS (NM_020927) 98 NM_020927 57687 Hs.461405 NM_020927 ENSG00000171724 VAT1L - vesicle amine transport 1 like protein-coding chr10-3893 chr10 61843137 61843347 + 10.4 0.000 Intergenic Intergenic -58457 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr4-6127 chr4 24353326 24353536 + 10.4 0.000 intron (NM_001330752, intron 1 of 13) intron (NM_001330752, intron 1 of 13) 119474 NR_148987 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr11-7142 chr11 126310601 126310811 + 10.4 0.000 intron (NM_014026, intron 2 of 5) intron (NM_014026, intron 2 of 5) 6646 NM_014026 28960 Hs.504249 NM_014026 ENSG00000110063 DCPS ARS|DCS1|HINT-5|HINT5|HSL1|HSPC015 decapping enzyme, scavenger protein-coding chr13-2901 chr13 113202875 113203085 + 10.4 0.000 intron (NM_001353091, intron 1 of 14) intron (NM_001353091, intron 1 of 14) -5213 NM_001278513 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr9-6502 chr9 99604097 99604307 + 10.4 0.000 intron (NR_109802, intron 3 of 6) intron (NR_109802, intron 3 of 6) 215687 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr2-7672 chr2 29403548 29403758 + 10.4 0.000 intron (NM_004304, intron 4 of 28) AluJb|SINE|Alu 71724 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr6-1523 chr6 33599502 33599712 + 10.4 0.000 Intergenic Intergenic -6269 NR_027908 401253 Hs.520075 NM_207497 ENSG00000197251 LINC00336 C6orf227|NCRNA00336 long intergenic non-protein coding RNA 336 ncRNA chr6-7839 chr6 104317888 104318098 + 10.4 0.000 Intergenic Intergenic 541553 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr13-1451 chr13 73521194 73521404 + 10.4 0.000 Intergenic Intergenic -42945 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr10-9094 chr10 126031942 126032152 + 10.4 0.000 intron (NM_003474, intron 21 of 22) intron (NM_003474, intron 21 of 22) -58774 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr15-3161 chr15 68211490 68211700 + 10.4 0.000 intron (NM_017882, intron 4 of 6) intron (NM_017882, intron 4 of 6) -5485 NR_104583 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr4-5019 chr4 139589134 139589344 + 10.4 0.000 Intergenic THE1B|LTR|ERVL-MaLR -32470 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr8-3509 chr8 113879657 113879867 + 10.4 0.000 Intergenic Intergenic -442823 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr3-3264 chr3 62632854 62633064 + 10.4 0.000 intron (NM_003716, intron 6 of 29) intron (NM_003716, intron 6 of 29) 242457 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr8-2549 chr8 29405527 29405737 + 10.4 0.000 Intergenic L1PA16|LINE|L1 -54948 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr16-2798 chr16 57508866 57509076 + 10.4 0.000 Intergenic AluSz|SINE|Alu -22478 NM_001369618 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr5-2324 chr5 61423881 61424091 + 10.4 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 91728 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr2-2720 chr2 85933953 85934163 + 10.4 0.000 Intergenic AluJb|SINE|Alu 44778 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chrX-866 chrX 149314070 149314280 + 10.4 0.000 Intergenic Intergenic 191131 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr10-6124 chr10 132882683 132882893 + 10.4 0.000 intron (NM_001200049, intron 27 of 57) intron (NM_001200049, intron 27 of 57) 59782 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr13-3667 chr13 33688957 33689167 + 10.4 0.000 Intergenic Intergenic -12268 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr13-1417 chr13 34179697 34179907 + 10.4 0.000 Intergenic Intergenic -168241 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr14-1609 chr14 101075985 101076195 + 10.4 0.000 Intergenic Intergenic 6179 NR_047664 100507257 Hs.301755 NR_047664 ENSG00000223403 MEG9 LINC00584 maternally expressed 9 ncRNA chr7-2747 chr7 45153296 45153506 + 10.4 0.000 Intergenic Intergenic -4390 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr13-1243 chr13 96160528 96160738 + 10.4 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 69794 NM_153456 266722 Hs.171001 NM_153456 ENSG00000185352 HS6ST3 HS6ST-3 heparan sulfate 6-O-sulfotransferase 3 protein-coding chr10-3711 chr10 111288760 111288970 + 10.4 0.000 Intergenic Intergenic 174574 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr11-3833 chr11 68618770 68618980 + 10.4 0.000 Intergenic FLAM_C|SINE|Alu -65669 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr11-2180 chr11 6706047 6706257 + 10.4 0.000 Intergenic Intergenic 15727 NR_003945 387751 Hs.494757 NR_003945 ENSG00000254838 GVINP1 GVIN1|GVIN1P|VLIG-1|VLIG1 GTPase, very large interferon inducible pseudogene 1 pseudo chr4-5043 chr4 141756314 141756524 + 10.4 0.000 Intergenic Intergenic 119836 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr9-727 chr9 109013594 109013804 + 10.4 0.000 promoter-TSS (NM_001286974) promoter-TSS (NM_001286974) -200 NM_003798 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr5-5661 chr5 158888647 158888857 + 10.4 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 209204 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr6-3916 chr6 73309519 73309729 + 10.4 0.000 exon (NM_001251874, exon 1 of 5) exon (NM_001251874, exon 1 of 5) 535 NM_001251874 80759 Hs.433062 NM_030568 ENSG00000135314 KHDC1 C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4 KH domain containing 1 protein-coding chr5-3853 chr5 128436884 128437094 + 10.4 0.000 intron (NM_001999, intron 7 of 64) intron (NM_001999, intron 7 of 64) 101256 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr15-5078 chr15 86421969 86422179 + 10.4 0.000 intron (NM_152336, intron 18 of 24) L1PA7|LINE|L1 -105106 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr6-6722 chr6 1517042 1517252 + 10.4 0.000 Intergenic Intergenic -88384 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript ncRNA chr2-4093 chr2 140374243 140374453 + 10.4 0.000 intron (NM_018557, intron 68 of 90) intron (NM_018557, intron 68 of 90) 212337 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chrX-497 chrX 49080141 49080351 + 10.4 0.000 promoter-TSS (NM_001029896) promoter-TSS (NM_001029896) -359 NM_001029896 11152 Hs.632807 NM_007075 ENSG00000196998 WDR45 JM5|NBIA4|NBIA5|WDRX1|WIPI-4|WIPI4 WD repeat domain 45 protein-coding chr4-4279 chr4 24690463 24690673 + 10.4 0.000 Intergenic Intergenic -105005 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr3-9907 chr3 85980491 85980701 + 10.4 0.000 intron (NM_001256502, intron 9 of 10) intron (NM_001256502, intron 9 of 10) -152546 NR_046752 100874037 Hs.570566 NR_046752 ENSG00000241648 CADM2-AS2 - CADM2 antisense RNA 2 ncRNA chr13-1738 chr13 106373553 106373763 + 10.4 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -2906 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr2-4531 chr2 39309406 39309616 + 10.4 0.000 exon (NM_001270425, exon 14 of 33) exon (NM_001270425, exon 14 of 33) -65528 NR_144521 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr2-2964 chr2 29223943 29224153 + 10.4 0.000 promoter-TSS (NM_001353765) promoter-TSS (NM_001353765) -148 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr17-4341 chr17 4297140 4297350 + 10.4 0.000 intron (NM_003342, intron 2 of 5) L2b|LINE|L2 -25351 NR_110982 103021295 Hs.741319 NR_110982 LOC103021295 - uncharacterized LOC103021295 ncRNA chr10-3895 chr10 62874885 62875095 + 10.4 0.000 Intergenic AluSx|SINE|Alu -55823 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chr14-3409 chr14 95794647 95794857 + 10.4 0.000 Intergenic Intergenic 79269 NR_148060 107984703 Hs.633538 NR_148060 LOC107984703 - uncharacterized LOC107984703 ncRNA chr8-4501 chr8 119749719 119749929 + 10.4 0.000 intron (NM_003184, intron 22 of 25) intron (NM_003184, intron 22 of 25) -76434 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr8-2222 chr8 22151903 22152113 + 10.4 0.000 intron (NM_139278, intron 5 of 7) intron (NM_139278, intron 5 of 7) 4798 NM_139278 203190 Hs.33470 NM_139278 ENSG00000168481 LGI3 LGIL4 leucine rich repeat LGI family member 3 protein-coding chr8-3594 chr8 139425895 139426105 + 10.4 0.000 Intergenic Intergenic 277123 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr5-2499 chr5 150393892 150394102 + 10.4 0.000 intron (NM_001135244, intron 22 of 25) AluJo|SINE|Alu 18759 NM_001364084 972 Hs.436568 NM_004355 ENSG00000019582 CD74 DHLAG|HLADG|II|Ia-GAMMA|p33 CD74 molecule protein-coding chr17-4251 chr17 50769823 50770033 + 10.4 0.000 Intergenic AluSz|SINE|Alu 1278 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr2-6256 chr2 43829899 43830109 + 10.4 0.000 intron (NM_022436, intron 4 of 12) intron (NM_022436, intron 4 of 12) 8835 NM_022436 64240 Hs.132992 NM_022436 ENSG00000138075 ABCG5 STSL ATP binding cassette subfamily G member 5 protein-coding chr19-4479 chr19 5642120 5642330 + 10.4 0.000 intron (NM_001320572, intron 4 of 20) intron (NM_001320572, intron 4 of 20) 19142 NM_001201339 6294 Hs.728802 NM_002967 ENSG00000160633 SAFB HAP|HET|SAB-B1|SAF-B|SAF-B1|SAFB1 scaffold attachment factor B protein-coding chr1-15531 chr1 157117407 157117617 + 10.4 0.000 Intergenic Intergenic -10850 NR_001560 360155 Hs.491808 NR_001560 ENSG00000235700 CYCSP52 HC6|HCP2 CYCS pseudogene 52 pseudo chr1-7308 chr1 246113654 246113864 + 10.4 0.000 intron (NM_022743, intron 5 of 11) L2b|LINE|L2 303653 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr22-1897 chr22 45485265 45485475 + 10.4 0.000 Intergenic MER83B-int|LTR|ERV1 -17513 NM_006486 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr9-2839 chr9 127203631 127203841 + 10.4 0.000 intron (NM_014636, intron 14 of 18) L2a|LINE|L2 -59926 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr2-9420 chr2 232321048 232321258 + 10.4 0.000 intron (NR_046476, intron 14 of 20) intron (NR_046476, intron 14 of 20) -57598 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr3-2749 chr3 138221852 138222062 + 10.4 0.000 exon (NM_001363942, exon 3 of 22) exon (NM_001363942, exon 3 of 22) 34426 NM_001267042 25852 Hs.744868 NM_014154 ENSG00000114098 ARMC8 GID5|HSPC056|S863-2|VID28 armadillo repeat containing 8 protein-coding chr1-4390 chr1 167373570 167373780 + 10.4 0.000 intron (NM_001198786, intron 5 of 14) intron (NM_001198786, intron 5 of 14) 44605 NM_001198783 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chr14-984 chr14 76956503 76956713 + 10.4 0.000 Intergenic CpG -3030 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr4-5181 chr4 158354311 158354521 + 10.4 0.000 Intergenic Tigger20a|DNA|TcMar-Tigger 143930 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr5-4556 chr5 20477749 20477959 + 10.4 0.000 intron (NM_001349558, intron 1 of 15) L1MA3|LINE|L1 97859 NM_001291956 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr15-1166 chr15 85607930 85608140 + 10.4 0.000 intron (NM_007200, intron 8 of 36) intron (NM_007200, intron 8 of 36) -11915 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr12-2559 chr12 109595254 109595464 + 10.4 0.000 intron (NM_000431, intron 10 of 10) MIRb|SINE|MIR 21565 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr16-4353 chr16 35202394 35202604 + 10.4 0.000 Intergenic Intergenic 6740 NR_157262 112268173 Hs.369226 NR_157261 LOC112268173 - uncharacterized LOC112268173 ncRNA chr1-6536 chr1 28021056 28021266 + 10.4 0.000 intron (NM_001282561, intron 6 of 16) L2a|LINE|L2 61699 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr9-4169 chr9 15782034 15782244 + 10.4 0.000 intron (NM_001355547, intron 19 of 24) intron (NM_001355547, intron 19 of 24) 218161 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr3-10040 chr3 104018392 104018602 + 10.4 0.000 Intergenic Intergenic -494381 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr7-6662 chr7 139321042 139321252 + 10.4 0.000 Intergenic LTR78|LTR|ERV1 -19212 NM_001244585 51631 Hs.731488 NM_016019 ENSG00000146963 LUC7L2 CGI-59|CGI-74|LUC7B2 LUC7 like 2, pre-mRNA splicing factor protein-coding chr1-7092 chr1 193730083 193730293 + 10.4 0.000 Intergenic Intergenic 425443 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr2-8691 chr2 151712949 151713159 + 10.4 0.000 intron (NM_001271208, intron 10 of 182) intron (NM_001271208, intron 10 of 182) 21422 NM_001271208 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr20-2263 chr20 3035548 3035758 + 10.4 0.000 exon (NM_002836, exon 25 of 28) exon (NM_002836, exon 25 of 28) -7969 NM_001310220 2797 Hs.129715 NM_001501 ENSG00000125787 GNRH2 GnRH-II|LH-RHII gonadotropin releasing hormone 2 protein-coding chr3-6553 chr3 120558852 120559062 + 10.4 0.000 Intergenic Intergenic -37379 NM_001168331 4710 Hs.304613 NM_004547 ENSG00000065518 NDUFB4 B15|CI-B15 NADH:ubiquinone oxidoreductase subunit B4 protein-coding chr2-13417 chr2 141928083 141928293 + 10.4 0.000 intron (NM_018557, intron 1 of 90) intron (NM_018557, intron 1 of 90) 203513 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr2-8009 chr2 68811290 68811500 + 10.4 0.000 intron (NM_001007231, intron 5 of 10) intron (NM_001007231, intron 5 of 10) 36485 NM_001166276 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding chr1-5130 chr1 154703198 154703408 + 10.4 0.000 3' UTR (NM_001365837, exon 9 of 9) 3' UTR (NM_001365837, exon 9 of 9) -75306 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr8-4138 chr8 74690031 74690241 + 10.4 0.000 intron (NR_033830, intron 2 of 5) intron (NR_033830, intron 2 of 5) -15557 NR_031744 100302260 NR_031744 ENSG00000283188 MIR2052 hsa-mir-2052 microRNA 2052 ncRNA chr7-3673 chr7 47231436 47231646 + 10.4 0.000 Intergenic Intergenic 233262 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr1-11127 chr1 233316036 233316246 + 10.4 0.000 Intergenic Intergenic -11583 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr10-2858 chr10 72260673 72260883 + 10.4 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -13146 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr2-12035 chr2 29404505 29404715 + 10.4 0.000 intron (NM_004304, intron 4 of 28) intron (NM_004304, intron 4 of 28) 70767 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr1-3832 chr1 25695916 25696126 + 10.4 0.000 intron (NM_020379, intron 2 of 11) intron (NM_020379, intron 2 of 11) 78553 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr2-5268 chr2 61681854 61682064 + 10.4 0.000 Intergenic L2a|LINE|L2 -143603 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr7-2884 chr7 128045777 128045987 + 10.4 0.000 intron (NM_014390, intron 16 of 23) MLT1L|LTR|ERVL-MaLR -14445 NM_022143 64101 Hs.655003 NM_022143 ENSG00000128594 LRRC4 NAG14|NGL-2 leucine rich repeat containing 4 protein-coding chr12-4876 chr12 63121852 63122062 + 10.4 0.000 Intergenic Intergenic 30853 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr5-3025 chr5 11905317 11905527 + 10.4 0.000 promoter-TSS (NR_109988) promoter-TSS (NR_109988) -976 NM_001332 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr11-8689 chr11 4740657 4740867 + 10.4 0.000 Intergenic Intergenic 29176 NM_001004752 256892 NM_001004752 ENSG00000280021 OR51F1 OR11-21|OR51F1P olfactory receptor family 51 subfamily F member 1 (gene/pseudogene) protein-coding chr19-2772 chr19 43519500 43519710 + 10.4 0.000 intron (NM_001320869, intron 1 of 4) intron (NM_001320869, intron 1 of 4) 7596 NM_001320867 23474 Hs.7486 NM_014297 ENSG00000105755 ETHE1 HSCO|YF13H12 ETHE1 persulfide dioxygenase protein-coding chr8-6585 chr8 71562636 71562846 + 10.4 0.000 Intergenic Intergenic -14647 NM_001370336 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr13-1120 chr13 24161168 24161378 + 10.4 0.000 intron (NM_153023, intron 1 of 11) CpG 553 NM_153023 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr13-2658 chr13 81307624 81307834 + 10.4 0.000 Intergenic MER50|LTR|ERV1 -80746 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr3-4777 chr3 112688775 112688985 + 10.4 0.000 Intergenic Intergenic -47737 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr14-2799 chr14 22032067 22032277 + 10.4 0.000 Intergenic Intergenic -361155 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr15-1715 chr15 82810739 82810949 + 10.4 0.000 intron (NM_001080435, intron 1 of 9) intron (NM_001080435, intron 1 of 9) 1216 NM_001080435 123720 Hs.377360 NM_001080435 ENSG00000156232 WHAMM WHAMM1|WHDC1 WASP homolog associated with actin, golgi membranes and microtubules protein-coding chr9-2398 chr9 133826060 133826270 + 10.4 0.000 intron (NM_001134398, intron 4 of 29) MIR3|SINE|MIR -86210 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr10-1902 chr10 119784795 119785005 + 10.4 0.000 intron (NM_014937, intron 3 of 19) L1MB8|LINE|L1 -34357 NM_001243194 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr4-3669 chr4 34961777 34961987 + 10.4 0.000 Intergenic Intergenic -692135 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr10-4729 chr10 821006 821216 + 10.4 0.000 intron (NM_001351277, intron 13 of 17) intron (NM_001351277, intron 13 of 17) 110594 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chrX-4228 chrX 38387592 38387802 + 10.4 0.000 intron (NM_000531, intron 4 of 9) MER68|LTR|ERVL 35093 NM_000531 5009 Hs.117050 NM_000531 ENSG00000036473 OTC OCTD ornithine carbamoyltransferase protein-coding chrX-704 chrX 85831796 85832006 + 10.4 0.000 Intergenic L2c|LINE|L2 -3879 NR_031710 100302171 NR_031710 ENSG00000283435 MIR1321 MIRN1321|hsa-mir-1321 microRNA 1321 ncRNA chr1-6373 chr1 9077861 9078071 + 10.4 0.000 Intergenic MER41B|LTR|ERV1 -5707 NM_001328619 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr10-3231 chr10 109787806 109788016 + 10.4 0.000 Intergenic MIRc|SINE|MIR 135335 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr7-6182 chr7 128933599 128933809 + 10.4 0.000 Intergenic Intergenic -3328 NM_001347928 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr11-8105 chr11 44412060 44412270 + 10.4 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -102026 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr2-2190 chr2 38957954 38958164 + 10.4 0.000 exon (NM_001367623, exon 13 of 17) exon (NM_001367623, exon 13 of 17) 2285 NR_028386 375196 Hs.659035 NR_028386 ENSG00000269210 LOC375196 - uncharacterized LOC375196 ncRNA chr11-5512 chr11 85663931 85664141 + 10.4 0.000 non-coding (NR_028024, exon 1 of 2) non-coding (NR_028024, exon 1 of 2) 1093 NR_028027 58487 Hs.535319 NM_021212 ENSG00000137504 CREBZF SMILE|ZF CREB/ATF bZIP transcription factor protein-coding chr3-5687 chr3 13689790 13690000 + 10.4 0.000 intron (NR_027103, intron 2 of 5) intron (NR_027103, intron 2 of 5) 39174 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chrX-3371 chrX 148955370 148955580 + 10.4 0.000 intron (NM_001170628, intron 7 of 17) intron (NM_001170628, intron 7 of 17) 236384 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr17-1199 chr17 75764921 75765131 + 10.4 0.000 exon (NM_000154, exon 1 of 8) exon (NM_000154, exon 1 of 8) 166 NM_000154 2584 Hs.407966 NM_000154 ENSG00000108479 GALK1 GALK|GK1|HEL-S-19 galactokinase 1 protein-coding chr11-1764 chr11 17504621 17504831 + 10.4 0.000 intron (NM_153676, intron 19 of 26) intron (NM_153676, intron 19 of 26) -27881 NM_001351296 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr3-1872 chr3 125357291 125357501 + 10.4 0.000 promoter-TSS (NM_001348433) promoter-TSS (NM_001348433) -116 NM_001348433 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr8-4392 chr8 104240642 104240852 + 10.4 0.000 intron (NR_145710, intron 25 of 29) MIR3|SINE|MIR 17412 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr6-3086 chr6 82735673 82735883 + 10.4 0.000 Intergenic Intergenic 330063 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr12-3143 chr12 43285309 43285519 + 10.4 0.000 Intergenic Intergenic 130099 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr7-3249 chr7 2469139 2469349 + 10.4 0.000 Intergenic Intergenic 7139 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr6-3966 chr6 104633336 104633546 + 10.4 0.000 Intergenic THE1C|LTR|ERVL-MaLR 226105 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr20-329 chr20 37345941 37346151 + 10.4 0.000 promoter-TSS (NM_198291) promoter-TSS (NM_198291) -82 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chrX-1485 chrX 137555321 137555531 + 10.4 0.000 Intergenic AluJo|SINE|Alu -10701 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr11-8817 chr11 11687424 11687634 + 10.4 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -30807 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr13-2717 chr13 93824214 93824424 + 10.4 0.000 intron (NR_046536, intron 5 of 6) intron (NR_046536, intron 5 of 6) 34154 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr2-9892 chr2 219042209 219042419 + 10.4 0.000 promoter-TSS (NM_001278295) promoter-TSS (NM_001278295) -763 NM_001278295 255101 Hs.147762 NM_152389 ENSG00000181378 CFAP65 CCDC108 cilia and flagella associated protein 65 protein-coding chr1-10284 chr1 149708524 149708734 + 10.4 0.000 Intergenic Intergenic 6420 NR_145442 644634 NM_001348147 LOC644634 - uncharacterized LOC644634 ncRNA chr1-11240 chr1 247793584 247793794 + 10.4 0.000 Intergenic MER66-int|LTR|ERV1 22040 NM_001001966 284532 Hs.626620 NM_001001966 ENSG00000196772 OR14A16 OR5AT1 olfactory receptor family 14 subfamily A member 16 protein-coding chr6-2603 chr6 112247653 112247863 + 10.4 0.000 intron (NR_121193, intron 2 of 2) L1MB3|LINE|L1 6809 NM_002290 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr14-2862 chr14 31326394 31326604 + 10.4 0.000 intron (NM_015473, intron 22 of 35) intron (NM_015473, intron 22 of 35) 94051 NM_015473 25938 Hs.744979 NM_015473 ENSG00000129493 HEATR5A C14orf125 HEAT repeat containing 5A protein-coding chr4-1488 chr4 34158920 34159130 + 10.4 0.000 intron (NR_147184, intron 2 of 3) L1MA2|LINE|L1 110722 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr8-4147 chr8 76046751 76046961 + 10.4 0.000 Intergenic Intergenic -359798 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr9-7618 chr9 37859346 37859556 + 10.4 0.000 intron (NM_001286810, intron 5 of 6) intron (NM_001286810, intron 5 of 6) 44676 NM_033412 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr12-6541 chr12 114049848 114050058 + 10.4 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -83628 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr17-6959 chr17 44677588 44677798 + 10.4 0.000 3' UTR (NM_001099225, exon 4 of 4) 3' UTR (NM_001099225, exon 4 of 4) 12083 NM_144609 124808 Hs.579115 NM_144609 ENSG00000180329 CCDC43 - coiled-coil domain containing 43 protein-coding chr1-4569 chr1 87706312 87706522 + 10.4 0.000 Intergenic Intergenic -334762 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr2-7033 chr2 153442937 153443147 + 10.4 0.000 Intergenic L1PA7|LINE|L1 35720 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr9-4226 chr9 76600363 76600573 + 10.4 0.000 Intergenic L1MCa|LINE|L1 91947 NM_001308050 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr4-3936 chr4 165171911 165172121 + 10.4 0.000 Intergenic AluY|SINE|Alu -35545 NM_007246 11275 Hs.388668 NM_007246 ENSG00000109466 KLHL2 ABP-KELCH|MAV|MAYVEN kelch like family member 2 protein-coding chr17-3777 chr17 35433317 35433527 + 10.4 0.000 promoter-TSS (NM_001289009) promoter-TSS (NM_001289009) -248 NM_001289009 55106 Hs.663548 NM_018042 ENSG00000172123 SLFN12 SLFN3 schlafen family member 12 protein-coding chr21-1293 chr21 42650547 42650757 + 10.4 0.000 Intergenic MLT2B2|LTR|ERVL -2969 NM_002606 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr22-2624 chr22 32788961 32789171 + 10.4 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -11750 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr4-8701 chr4 181848212 181848422 + 10.4 0.000 Intergenic MIR3|SINE|MIR -18344 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chrX-2740 chrX 126877398 126877608 + 10.4 0.000 Intergenic L1PBa|LINE|L1 57774 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr20-2760 chr20 51208332 51208542 + 10.4 0.000 Intergenic Intergenic -185330 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr12-1787 chr12 120538632 120538842 + 10.4 0.000 intron (NM_014868, intron 1 of 16) intron (NM_014868, intron 1 of 16) 4381 NM_001330474 9921 Hs.442798 NM_014868 ENSG00000022840 RNF10 RIE2 ring finger protein 10 protein-coding chr10-4401 chr10 58384623 58384833 + 10.4 0.000 promoter-TSS (NM_003201) promoter-TSS (NM_003201) -415 NR_073073 7019 Hs.594250 NM_003201 ENSG00000108064 TFAM MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 transcription factor A, mitochondrial protein-coding chr19-2688 chr19 17479414 17479624 + 10.4 0.000 intron (NM_198580, intron 1 of 11) intron (NM_198580, intron 1 of 11) 8995 NM_198580 376497 Hs.363138 NM_198580 ENSG00000130304 SLC27A1 ACSVL5|FATP|FATP-1|FATP1 solute carrier family 27 member 1 protein-coding chr15-1733 chr15 40575415 40575625 + 10.4 0.000 TTS (NM_001286407) TTS (NM_001286407) 6221 NM_152260 27079 Hs.173311 NM_152260 ENSG00000166133 RPUSD2 C15orf19|C18B11|PUS9 RNA pseudouridine synthase domain containing 2 protein-coding chr1-5629 chr1 21541977 21542187 + 10.4 0.000 intron (NM_001177520, intron 1 of 9) intron (NM_001177520, intron 1 of 9) -9188 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr6-4049 chr6 132790293 132790503 + 10.4 0.000 intron (NM_052831, intron 2 of 13) intron (NM_052831, intron 2 of 13) 8239 NM_052831 116843 Hs.347144 NM_052831 ENSG00000146409 SLC18B1 C6orf192|dJ55C23.6 solute carrier family 18 member B1 protein-coding chr12-4576 chr12 30417685 30417895 + 10.4 0.000 Intergenic Intergenic 259454 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr10-6019 chr10 125559318 125559528 + 10.4 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -14948 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr4-2841 chr4 51853509 51853719 + 10.4 0.000 intron (NM_001287757, intron 2 of 11) MER5B|DNA|hAT-Charlie 10035 NM_001287755 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr9-7697 chr9 72163006 72163216 + 10.4 0.000 intron (NM_001351571, intron 1 of 13) L2b|LINE|L2 13671 NR_147240 9615 Hs.494163 NM_004293 ENSG00000119125 GDA CYPIN|GAH|GUANASE|NEDASIN guanine deaminase protein-coding chr6-3521 chr6 36658054 36658264 + 10.4 0.000 Intergenic LTR16A2|LTR|ERVL 16967 NR_109836 101154753 Hs.741557 NR_109836 ENSG00000281450 PANDAR PANDA promoter of CDKN1A antisense DNA damage activated RNA ncRNA chr1-4638 chr1 177670218 177670428 + 10.4 0.000 Intergenic Intergenic -30201 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr7-4722 chr7 50728322 50728532 + 10.4 0.000 intron (NM_001350816, intron 2 of 17) intron (NM_001350816, intron 2 of 17) 3926 NM_001001549 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr22-1709 chr22 17058197 17058407 + 10.4 0.000 non-coding (NR_015352, exon 4 of 4) non-coding (NR_015352, exon 4 of 4) 21732 NR_152825 100130418 Hs.660640 NR_015352 CECR7 CYCL|SAHL1 cat eye syndrome chromosome region, candidate 7 ncRNA chr8-2717 chr8 99248147 99248357 + 10.4 0.000 intron (NM_017890, intron 17 of 61) intron (NM_017890, intron 17 of 61) 234986 NM_015243 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr8-4728 chr8 142020796 142021006 + 10.4 0.000 Intergenic Intergenic -155438 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr11-5331 chr11 61011284 61011494 + 10.4 0.000 intron (NM_001254751, intron 6 of 10) intron (NM_001254751, intron 6 of 10) 39709 NM_001254751 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr2-5837 chr2 236426611 236426821 + 10.4 0.000 intron (NR_073043, intron 7 of 19) L1MA9|LINE|L1 76981 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr20-1723 chr20 41058424 41058634 + 10.4 0.000 intron (NM_003286, intron 2 of 20) MLT1F1|LTR|ERVL-MaLR 29707 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr6-1900 chr6 3053648 3053858 + 10.4 0.000 Intergenic Intergenic -10214 NM_003804 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 IMD57|RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr15-2808 chr15 38023194 38023404 + 10.4 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -17094 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LINC02345 - long intergenic non-protein coding RNA 2345 ncRNA chr11-10124 chr11 88428996 88429206 + 10.4 0.000 Intergenic MER5A|DNA|hAT-Charlie -75475 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr1-1989 chr1 6245104 6245314 + 10.4 0.000 exon (NM_001024598, exon 4 of 4) exon (NM_001024598, exon 4 of 4) 1030 NM_001024598 390992 Hs.532677 NM_001024598 ENSG00000173673 HES3 bHLHb43 hes family bHLH transcription factor 3 protein-coding chr7-2581 chr7 129041609 129041819 + 10.4 0.000 non-coding (NR_034053, exon 2 of 24) non-coding (NR_034053, exon 2 of 24) 13459 NR_034053 23534 Hs.193613 NM_012470 ENSG00000064419 TNPO3 IPO12|LGMD1F|LGMDD2|MTR10A|TRN-SR|TRN-SR2|TRNSR transportin 3 protein-coding chr9-6541 chr9 114397514 114397724 + 10.4 0.000 Intergenic Intergenic -3214 NM_030767 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding KI270719.1-5 KI270719.1 133703 133913 + 10.4 0.000 NA NA NA NA chr7-5232 chr7 16248579 16248789 + 10.4 0.000 intron (NR_038946, intron 2 of 4) L1PA6|LINE|L1 38198 NR_038947 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr10-8524 chr10 91983178 91983388 + 10.4 0.000 intron (NM_003972, intron 18 of 37) intron (NM_003972, intron 18 of 37) 59513 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chr18-2678 chr18 56703141 56703351 + 10.4 0.000 intron (NM_015285, intron 12 of 27) intron (NM_015285, intron 12 of 27) 51861 NM_052834 23335 Hs.465213 NM_015285 ENSG00000091157 WDR7 TRAG WD repeat domain 7 protein-coding chr7-2316 chr7 101679010 101679220 + 10.4 0.000 Intergenic Intergenic -49819 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr5-3855 chr5 131090022 131090232 + 10.4 0.000 Intergenic L1PA4|LINE|L1 75129 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr9-5662 chr9 122821112 122821322 + 10.4 0.000 intron (NM_005388, intron 3 of 3) MIRb|SINE|MIR 7371 NM_005388 5082 Hs.271749 NM_005388 ENSG00000136940 PDCL PhLP phosducin like protein-coding chr8-508 chr8 28701555 28701765 + 10.4 0.000 promoter-TSS (NR_126027) promoter-TSS (NR_126027) 159 NR_073469 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr9-7113 chr9 130432532 130432742 + 10.4 0.000 intron (NM_001291815, intron 97 of 97) intron (NM_001291815, intron 97 of 97) -12070 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr10-5959 chr10 123088616 123088826 + 10.4 0.000 Intergenic Intergenic -47249 NM_001105574 340784 Hs.531194 NM_001105574 ENSG00000188620 HMX3 NKX-5.1|NKX5.1|Nkx5-1 H6 family homeobox 3 protein-coding chr7-3254 chr7 3493692 3493902 + 10.4 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 192545 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr1-2484 chr1 146039016 146039226 + 10.4 0.000 Intergenic Intergenic 13123 NR_104085 101954276 NR_104085 ENSG00000201558 RNVU1-6 RNU1-99|vU1.6 RNA, variant U1 small nuclear 6 snRNA chr1-8558 chr1 166902314 166902524 + 10.4 0.000 Intergenic Intergenic -26155 NM_053053 117143 Hs.435967 NM_053053 ENSG00000152382 TADA1 ADA1|HFI1|STAF42|TADA1L|hADA1 transcriptional adaptor 1 protein-coding chr6-7389 chr6 50445748 50445958 + 10.4 0.000 Intergenic Intergenic -267691 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr4-2309 chr4 74794373 74794583 + 10.4 0.000 promoter-TSS (NM_001729) promoter-TSS (NM_001729) 45 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chrX-2882 chrX 148464366 148464576 + 10.4 0.000 Intergenic MIR|SINE|MIR -36146 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr1-4208 chr1 102696541 102696751 + 10.4 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 411850 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr4-1396 chr4 895611 895821 + 10.4 0.000 intron (NM_005255, intron 7 of 27) intron (NM_005255, intron 7 of 27) 36600 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr3-3694 chr3 161498180 161498390 + 10.4 0.000 intron (NM_001080440, intron 1 of 3) MamTip3|DNA|hAT-Tip100 1477 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr14-2844 chr14 28442822 28443032 + 10.4 0.000 Intergenic MER66-int|LTR|ERV1 322392 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr1-7672 chr1 16722240 16722450 + 10.4 0.000 Intergenic UCON71_Crp|Unknown|Unknown -2188 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr18-1568 chr18 32744906 32745116 + 10.4 0.000 intron (NM_020805, intron 2 of 8) LFSINE_Vert|SINE|tRNA 28012 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr2-3423 chr2 71166928 71167138 + 10.4 0.000 Intergenic Intergenic 36399 NM_005791 10199 Hs.656208 NM_005791 ENSG00000124383 MPHOSPH10 CT90|MPP10|MPP10P|PPP1R106 M-phase phosphoprotein 10 protein-coding chr10-6129 chr10 133113999 133114209 + 10.4 0.000 intron (NM_001083909, intron 5 of 6) intron (NM_001083909, intron 5 of 6) 11858 NM_001291085 84435 Hs.435183 NM_032422 ENSG00000197177 ADGRA1 GPR123 adhesion G protein-coupled receptor A1 protein-coding chr7-5196 chr7 11212298 11212508 + 10.4 0.000 Intergenic Intergenic 238531 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chrX-1765 chrX 64094030 64094240 + 10.4 0.000 Intergenic Intergenic 111573 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding chr12-2901 chr12 49900498 49900708 + 10.4 0.000 intron (NM_012306, intron 2 of 11) intron (NM_012306, intron 2 of 11) 3297 NM_012306 23017 Hs.567424 NM_012306 ENSG00000135472 FAIM2 LFG|LFG2|NGP35|NMP35|TMBIM2 Fas apoptotic inhibitory molecule 2 protein-coding chr16-4386 chr16 49798941 49799151 + 10.4 0.000 intron (NM_001271620, intron 1 of 7) intron (NM_001271620, intron 1 of 7) 23692 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr16-4164 chr16 6723709 6723919 + 10.4 0.000 intron (NM_018723, intron 3 of 15) intron (NM_018723, intron 3 of 15) -49995 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr8-4432 chr8 110669929 110670139 + 10.4 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 357399 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr10-3763 chr10 123578550 123578760 + 10.4 0.000 Intergenic Intergenic -87700 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr19-2323 chr19 20565539 20565749 + 10.4 0.000 5' UTR (NM_001159293, exon 1 of 4) 5' UTR (NM_001159293, exon 1 of 4) 137 NM_001159293 100129842 Hs.515696 NM_001159293 ENSG00000237440 ZNF737 ZNF102 zinc finger protein 737 protein-coding chr18-1726 chr18 3823546 3823756 + 10.4 0.000 intron (NM_001242761, intron 4 of 11) intron (NM_001242761, intron 4 of 11) 21707 NM_001242765 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr6-6339 chr6 53691834 53692044 + 10.4 0.000 Intergenic Intergenic -26183 NM_001003760 401265 Hs.131064 NM_001003760 ENSG00000124743 KLHL31 BKLHD6|KBTBD1|KLHL|bA345L23.2 kelch like family member 31 protein-coding chrX-4348 chrX 48076437 48076647 + 10.4 0.000 Intergenic Intergenic -4884 NM_001190255 57232 Hs.650883 NM_001037735 ENSG00000221994 ZNF630 dJ54B20.2 zinc finger protein 630 protein-coding chr2-3420 chr2 62664658 62664868 + 10.4 0.000 Intergenic Intergenic -9115 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr18-2579 chr18 10353334 10353544 + 10.4 0.000 Intergenic Intergenic 60931 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr21-746 chr21 41993869 41994079 + 10.4 0.000 exon (NM_001320729, exon 2 of 3) exon (NM_001320729, exon 2 of 3) -15220 NR_119384 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA chr10-3212 chr10 101560563 101560773 + 10.4 0.000 Intergenic Intergenic 27589 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr20-507 chr20 48921399 48921609 + 10.4 0.000 promoter-TSS (NM_006420) promoter-TSS (NM_006420) -207 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr10-5696 chr10 100128125 100128335 + 10.4 0.000 Intergenic L2|LINE|L2 -46361 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chr10-5588 chr10 92447134 92447344 + 10.4 0.000 Intergenic AluJb|SINE|Alu 28578 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - microtubule affinity regulating kinase 2 pseudogene 9 pseudo chr15-1643 chr15 93333639 93333849 + 10.4 0.000 Intergenic Intergenic 127678 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr18-2804 chr18 3794759 3794969 + 10.4 0.000 intron (NM_001242762, intron 2 of 9) intron (NM_001242762, intron 2 of 9) 50494 NM_001242765 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr4-2221 chr4 140617630 140617840 + 10.4 0.000 Intergenic Intergenic 25345 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr5-4178 chr5 108202873 108203083 + 10.4 0.000 intron (NM_001163315, intron 5 of 8) intron (NM_001163315, intron 5 of 8) 179120 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr2-8076 chr2 74250307 74250517 + 10.4 0.000 exon (NM_021196, exon 12 of 26) exon (NM_021196, exon 12 of 26) 51797 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr11-6760 chr11 84865180 84865390 + 10.4 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) 58136 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-1726 chr9 123085525 123085735 + 10.4 0.000 intron (NM_012197, intron 19 of 25) intron (NM_012197, intron 19 of 25) 26013 NR_030331 693185 NR_030331 ENSG00000283941 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA chr5-2514 chr5 157524032 157524242 + 10.4 0.000 intron (NM_033274, intron 5 of 22) intron (NM_033274, intron 5 of 22) 51638 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr9-6033 chr9 136142926 136143136 + 10.4 0.000 Intergenic Intergenic -24156 NM_152833 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr1-3382 chr1 185559915 185560125 + 10.4 0.000 intron (NR_110793, intron 3 of 3) intron (NR_110793, intron 3 of 3) 68468 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr17-2949 chr17 60153981 60154191 + 10.4 0.000 intron (NR_137422, intron 1 of 11) intron (NR_137422, intron 1 of 11) 4113 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr11-6264 chr11 57945679 57945889 + 10.4 0.000 Intergenic Intergenic -78097 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr10-3381 chr10 24762373 24762583 + 10.4 0.000 Intergenic Intergenic -38591 NM_020824 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr8-3799 chr8 27693245 27693455 + 10.4 0.000 Intergenic MER4D1|LTR|ERV1 -8327 NR_037417 100500858 NR_037417 ENSG00000284351 MIR3622A mir-3622a microRNA 3622a ncRNA chr1-4520 chr1 36946328 36946538 + 10.4 0.000 intron (NM_000831, intron 1 of 15) intron (NM_000831, intron 1 of 15) 88082 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr6-7911 chr6 109241341 109241551 + 10.4 0.000 intron (NR_152435, intron 15 of 45) intron (NR_152435, intron 15 of 45) 75615 NR_152435 221262 Hs.373914 NM_173671 ENSG00000203799 CCDC162P C6orf183|C6orf184|C6orf185|CCDC162 coiled-coil domain containing 162, pseudogene pseudo chr20-1708 chr20 37251553 37251763 + 10.4 0.000 intron (NM_021081, intron 3 of 3) L2b|LINE|L2 5250 NM_021081 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chr7-4598 chr7 18040334 18040544 + 10.4 0.000 Intergenic Plat_L3|LINE|CR1 -12593 NM_175886 221823 Hs.169284 NM_175886 ENSG00000229937 PRPS1L1 PRPS1|PRPS3|PRPSL|PRS-III phosphoribosyl pyrophosphate synthetase 1 like 1 protein-coding chr8-3844 chr8 31239073 31239283 + 10.4 0.000 Intergenic Intergenic -205822 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr17-3943 chr17 61294465 61294675 + 10.4 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 73134 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr2-5607 chr2 181152412 181152622 + 10.4 0.000 intron (NR_130784, intron 1 of 4) intron (NR_130784, intron 1 of 4) 28680 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA chr3-5087 chr3 46559397 46559607 + 10.4 0.000 non-coding (NR_073385, exon 3 of 3) non-coding (NR_073385, exon 3 of 3) 2104 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr8-3141 chr8 69708876 69709086 + 10.4 0.000 intron (NM_001146009, intron 3 of 7) L2b|LINE|L2 116081 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr4-4251 chr4 18907930 18908140 + 10.4 0.000 Intergenic L1P3|LINE|L1 -886160 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr22-2175 chr22 44755212 44755422 + 10.4 0.000 intron (NM_181335, intron 1 of 11) intron (NM_181335, intron 1 of 11) 2759 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr6-2741 chr6 97120061 97120271 + 10.4 0.000 intron (NM_052904, intron 7 of 10) intron (NM_052904, intron 7 of 10) 110090 NM_001323261 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr9-2357 chr9 98484360 98484570 + 10.4 0.000 intron (NM_005458, intron 4 of 18) intron (NM_005458, intron 4 of 18) 224470 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr17-4397 chr17 29835492 29835702 + 10.4 0.000 intron (NM_033389, intron 1 of 14) intron (NM_033389, intron 1 of 14) -74165 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr2-7780 chr2 41241657 41241867 + 10.4 0.000 Intergenic Intergenic -635793 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr18-1310 chr18 70390749 70390959 + 10.4 0.000 Intergenic Intergenic -6263 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LINC01910 - long intergenic non-protein coding RNA 1910 ncRNA chr3-6682 chr3 131231756 131231966 + 10.4 0.000 intron (NM_001353043, intron 15 of 17) intron (NM_001353043, intron 15 of 17) -129984 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr22-1669 chr22 42958084 42958294 + 10.4 0.000 intron (NM_001184970, intron 1 of 10) MIR3|SINE|MIR 1667 NM_001349973 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr1-10505 chr1 166448250 166448460 + 10.4 0.000 Intergenic LTR81C|LTR|Gypsy 41684 NR_146890 105371590 Hs.575926 NR_146890 ENSG00000234142 LINC01675 - long intergenic non-protein coding RNA 1675 ncRNA chr16-4705 chr16 81926352 81926562 + 10.4 0.000 intron (NM_002661, intron 22 of 32) intron (NM_002661, intron 22 of 32) 85013 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr11-9368 chr11 47934499 47934709 + 10.4 0.000 Intergenic Intergenic -45955 NM_002843 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr6-3439 chr6 138360348 138360558 + 10.4 0.000 Intergenic L1PA15|LINE|L1 -17190 NM_001368163 110806279 NM_001368163 ENSG00000262543 SMIM28 - small integral membrane protein 28 protein-coding chr12-1913 chr12 84758106 84758316 + 10.4 0.000 Intergenic LTR41|LTR|ERVL 154588 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr6-4676 chr6 53255544 53255754 + 10.4 0.000 Intergenic MIRc|SINE|MIR -21344 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr20-1848 chr20 15673375 15673585 + 10.4 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 249834 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr7-5207 chr7 12158457 12158667 + 10.4 0.000 Intergenic L1MDa|LINE|L1 -52732 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr19-3135 chr19 18214800 18215010 + 10.4 0.000 intron (NM_001369701, intron 11 of 13) AluSx1|SINE|Alu 9588 NM_001098819 5143 Hs.132584 NM_000923 ENSG00000105650 PDE4C DPDE1|PDE21 phosphodiesterase 4C protein-coding chr6-1964 chr6 142378155 142378365 + 10.4 0.000 intron (NM_198569, intron 4 of 24) intron (NM_198569, intron 4 of 24) 76253 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr13-3455 chr13 110281536 110281746 + 10.4 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 25516 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr12-5413 chr12 121814790 121815000 + 10.4 0.000 exon (NM_001353345, exon 6 of 16) exon (NM_001353345, exon 6 of 16) 10171 NM_001353345 23067 Hs.507122 NM_015048 ENSG00000139718 SETD1B KMT2G|Set1B SET domain containing 1B, histone lysine methyltransferase protein-coding chr11-6268 chr11 58489765 58489975 + 10.4 0.000 Intergenic Intergenic 18235 NM_001005218 219968 Hs.553647 NM_001005218 ENSG00000198283 OR5B21 - olfactory receptor family 5 subfamily B member 21 protein-coding chr9-6899 chr9 90275227 90275437 + 10.4 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 158157 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr3-2924 chr3 52848835 52849045 + 10.4 0.000 intron (NM_001198974, intron 4 of 9) intron (NM_001198974, intron 4 of 9) -2388 NR_107031 102465866 NR_107031 ENSG00000275789 MIR8064 hsa-mir-8064 microRNA 8064 ncRNA chr21-1094 chr21 33858436 33858646 + 10.4 0.000 intron (NM_001331010, intron 29 of 38) intron (NM_001331010, intron 29 of 38) 57263 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr19-2711 chr19 27814909 27815119 + 10.4 0.000 intron (NR_146736, intron 2 of 2) LTR5B|LTR|ERVK -21074 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr15-1348 chr15 57373664 57373874 + 10.4 0.000 Intergenic Intergenic -2736 NM_032866 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr14-1857 chr14 69777776 69777986 + 10.4 0.000 intron (NM_003049, intron 4 of 4) intron (NM_003049, intron 4 of 4) -10168 NR_029378 100289511 Hs.729250 NR_029378 LOC100289511 - uncharacterized LOC100289511 ncRNA chr20-3402 chr20 39381610 39381820 + 10.4 0.000 Intergenic Intergenic -156967 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr20-1493 chr20 22325964 22326174 + 10.4 0.000 Intergenic Intergenic -43268 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chr10-5478 chr10 79926934 79927144 + 10.4 0.000 intron (NR_033857, intron 5 of 5) intron (NR_033857, intron 5 of 5) 6861 NR_002724 8512 Hs.733579 NR_002724 ENSG00000242600 MBL1P COLEC3P|MBL1P1 mannose binding lectin 1, pseudogene pseudo chr1-10001 chr1 85010099 85010309 + 10.4 0.000 Intergenic L1PB1|LINE|L1 -13091 NM_153259 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr13-2787 chr13 100646333 100646543 + 10.4 0.000 intron (NM_001079669, intron 5 of 17) intron (NM_001079669, intron 5 of 17) 28357 NM_001350572 84899 Hs.190983 NM_032813 ENSG00000125247 TMTC4 - transmembrane O-mannosyltransferase targeting cadherins 4 protein-coding chr2-4105 chr2 149693157 149693367 + 10.4 0.000 intron (NR_110240, intron 1 of 2) intron (NR_110240, intron 1 of 2) -105487 NM_015702 27249 Hs.5324 NM_015702 ENSG00000168288 MMADHC C2orf25|CL25022|cblD metabolism of cobalamin associated D protein-coding chr12-5463 chr12 124350641 124350851 + 10.4 0.000 intron (NM_001077261, intron 28 of 47) intron (NM_001077261, intron 28 of 47) -13504 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr16-2355 chr16 53789188 53789398 + 10.4 0.000 intron (NM_001363897, intron 1 of 7) intron (NM_001363897, intron 1 of 7) 85137 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr8-1792 chr8 96532140 96532350 + 10.4 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) 38432 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chrX-2613 chrX 107483029 107483239 + 10.4 0.000 Intergenic MER91A|DNA|hAT-Tip100 -39316 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr2-2873 chr2 178478636 178478846 + 10.4 0.000 promoter-TSS (NM_181342) promoter-TSS (NM_181342) -141 NM_181342 51661 Hs.410378 NM_016105 ENSG00000079150 FKBP7 FKBP23|PPIase FKBP prolyl isomerase 7 protein-coding chr17-3601 chr17 82779922 82780132 + 10.4 0.000 intron (NM_005993, intron 6 of 38) intron (NM_005993, intron 6 of 38) 27962 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr2-4971 chr2 197438253 197438463 + 10.4 0.000 Intergenic HERV16-int|LTR|ERVL -3265 NM_001005526 23451 Hs.632554 NM_012433 ENSG00000115524 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b subunit 1 protein-coding chr3-7047 chr3 173548006 173548216 + 10.4 0.000 intron (NM_014932, intron 2 of 6) intron (NM_014932, intron 2 of 6) -36323 NM_001365928 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr20-741 chr20 11917806 11918016 + 10.4 0.000 promoter-TSS (NM_001282551) promoter-TSS (NM_001282551) 18 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr5-4325 chr5 156798906 156799116 + 10.4 0.000 Intergenic Intergenic -51284 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr21-353 chr21 41957522 41957732 + 10.4 0.000 Intergenic Intergenic -3609 NM_015500 25966 Hs.473894 NM_015500 ENSG00000157617 C2CD2 C21orf25|C21orf258|TMEM24L C2 calcium dependent domain containing 2 protein-coding chr16-3058 chr16 57363220 57363430 + 10.4 0.000 intron (NM_002990, intron 2 of 2) intron (NM_002990, intron 2 of 2) 4542 NM_002990 6367 Hs.534347 NM_002990 ENSG00000102962 CCL22 A-152E5.1|ABCD-1|DC/B-CK|MDC|SCYA22|STCP-1 C-C motif chemokine ligand 22 protein-coding chr22-1350 chr22 25583006 25583216 + 10.4 0.000 intron (NM_001362778, intron 1 of 19) intron (NM_001362778, intron 1 of 19) 18436 NM_005160 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr3-3966 chr3 52501014 52501224 + 10.4 0.000 intron (NM_015136, intron 1 of 68) intron (NM_015136, intron 1 of 68) 5781 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr5-3414 chr5 148373399 148373609 + 10.4 0.000 intron (NR_105057, intron 2 of 4) intron (NR_105057, intron 2 of 4) 10346 NR_105057 102546294 Hs.660461 NR_105057 ENSG00000247199 LOC102546294 - uncharacterized LOC102546294 ncRNA chr1-10068 chr1 93080438 93080648 + 10.4 0.000 intron (NM_001164393, intron 1 of 12) intron (NM_001164393, intron 1 of 12) 1260 NM_007358 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr17-3467 chr17 42301534 42301744 + 10.4 0.000 intron (NM_001288718, intron 9 of 18) AluJb|SINE|Alu 13583 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr2-6096 chr2 192123942 192124152 + 10.4 0.000 intron (NM_001305134, intron 4 of 9) intron (NM_001305134, intron 4 of 9) 70886 NM_016192 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr10-3038 chr10 121035440 121035650 + 10.4 0.000 Intergenic LTR12C|LTR|ERV1 184183 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr20-1178 chr20 1809206 1809416 + 10.4 0.000 Intergenic Intergenic -29565 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr2-12716 chr2 79926959 79927169 + 10.4 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -60481 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr16-2337 chr16 31508357 31508567 + 10.4 0.000 promoter-TSS (NM_022744) promoter-TSS (NM_022744) -71 NM_022744 64755 Hs.9003 NM_022744 ENSG00000140688 C16orf58 RUS chromosome 16 open reading frame 58 protein-coding chr15-918 chr15 66505256 66505466 + 10.4 0.000 promoter-TSS (NM_000968) promoter-TSS (NM_000968) 35 NM_001287823 55055 Hs.21331 NM_017975 ENSG00000174442 ZWILCH KNTC1AP|hZwilch zwilch kinetochore protein protein-coding chr4-4527 chr4 67557674 67557884 + 10.4 0.000 promoter-TSS (NM_001317769) promoter-TSS (NM_001317769) -948 NM_001317769 26228 Hs.435579 NM_012108 ENSG00000035720 STAP1 BRDG1|STAP-1 signal transducing adaptor family member 1 protein-coding chr12-8117 chr12 119938836 119939046 + 10.4 0.000 Intergenic AluSz6|SINE|Alu -50295 NM_001367886 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chr12-2233 chr12 57794264 57794474 + 10.4 0.000 intron (NM_001172697, intron 5 of 5) intron (NM_001172697, intron 5 of 5) 11582 NM_005726 10102 Hs.632704 NM_005726 ENSG00000123297 TSFM EFTS|EFTSMT Ts translation elongation factor, mitochondrial protein-coding chr2-12726 chr2 81283231 81283441 + 10.4 0.000 Intergenic L1MEd|LINE|L1 183610 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr17-3747 chr17 29167849 29168059 + 10.4 0.000 intron (NM_078471, intron 1 of 41) MIRb|SINE|MIR 8819 NM_001346767 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr11-5871 chr11 10607857 10608067 + 10.4 0.000 intron (NM_001100163, intron 11 of 20) intron (NM_001100163, intron 11 of 20) -39297 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr2-5588 chr2 175626423 175626633 + 10.4 0.000 Intergenic Intergenic 375739 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr12-2746 chr12 32455795 32456005 + 10.4 0.000 intron (NM_001370298, intron 1 of 16) intron (NM_001370298, intron 1 of 16) -30072 NM_001304481 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr20-1647 chr20 23145360 23145570 + 10.4 0.000 Intergenic L2a|LINE|L2 -12829 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr2-3442 chr2 108272019 108272229 + 10.4 0.000 Intergenic Intergenic -16771 NM_176825 6819 Hs.436123 NM_001056 ENSG00000198203 SULT1C2 ST1C1|ST1C2|SULT1C1|humSULTC2 sulfotransferase family 1C member 2 protein-coding chr8-7006 chr8 109173662 109173872 + 10.4 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 87139 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr11-2525 chr11 74467243 74467453 + 10.4 0.000 intron (NM_005472, intron 1 of 2) CpG 207 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 BRGDA6|HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr14-2472 chr14 91228403 91228613 + 10.4 0.000 Intergenic Intergenic 16196 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr8-3128 chr8 62982803 62983013 + 10.4 0.000 non-coding (NR_027378, exon 1 of 1) non-coding (NR_027378, exon 1 of 1) 5047 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr3-3443 chr3 139579370 139579580 + 10.4 0.000 intron (NM_178177, intron 2 of 4) intron (NM_178177, intron 2 of 4) -39733 NM_001130993 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr2-3338 chr2 206714942 206715152 + 10.4 0.000 intron (NM_001093730, intron 1 of 11) L2a|LINE|L2 3349 NM_001093730 391475 Hs.640667 NM_001093730 ENSG00000232125 DYTN - dystrotelin protein-coding chrX-2371 chrX 68680194 68680404 + 10.4 0.000 intron (NM_014725, intron 2 of 13) MIR3|SINE|MIR -13340 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr9-2737 chr9 95054027 95054237 + 10.4 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -11218 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr19-4558 chr19 10577840 10578050 + 10.4 0.000 intron (NM_001300887, intron 8 of 11) AluSx|SINE|Alu -8966 NM_079421 1032 Hs.435051 NM_001800 ENSG00000129355 CDKN2D INK4D|p19|p19-INK4D cyclin dependent kinase inhibitor 2D protein-coding chr17-6046 chr17 79252173 79252383 + 10.4 0.000 intron (NM_001082575, intron 3 of 14) L2c|LINE|L2 177341 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr1-10789 chr1 201703738 201703948 + 10.4 0.000 intron (NR_046696, intron 2 of 2) intron (NR_046696, intron 2 of 2) -15665 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chr8-5699 chr8 125930170 125930380 + 10.4 0.000 intron (NR_038447, intron 3 of 3) L2a|LINE|L2 20922 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr4-1640 chr4 94207693 94207903 + 10.4 0.000 promoter-TSS (NM_020159) promoter-TSS (NM_020159) -67 NM_001128429 56916 Hs.410406 NM_020159 ENSG00000163104 SMARCAD1 ADERM|BASNS|ETL1|HEL1|HRZ SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding chr21-397 chr21 37064759 37064969 + 10.4 0.000 promoter-TSS (NR_131189) promoter-TSS (NR_131189) -798 NR_131189 105372795 Hs.528019 NR_131189 LOC105372795 - uncharacterized LOC105372795 ncRNA chr2-8206 chr2 95079536 95079746 + 10.4 0.000 Intergenic Intergenic 41916 NM_001321997 64969 Hs.655259 NM_031902 ENSG00000144029 MRPS5 MRP-S5|S5mt mitochondrial ribosomal protein S5 protein-coding chr1-6200 chr1 206053196 206053406 + 10.4 0.000 intron (NM_001007544, intron 1 of 5) Harlequin-int|LTR|ERV1 128 NM_001007544 440712 Hs.662248 NM_001007544 ENSG00000263961 RHEX C1orf186 regulator of hemoglobinization and erythroid cell expansion protein-coding chr21-465 chr21 41924371 41924581 + 10.4 0.000 intron (NM_015500, intron 2 of 13) intron (NM_015500, intron 2 of 13) 2227 NM_199050 25966 Hs.473894 NM_015500 ENSG00000157617 C2CD2 C21orf25|C21orf258|TMEM24L C2 calcium dependent domain containing 2 protein-coding chr3-7026 chr3 172060505 172060715 + 10.4 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 20079 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr14-3469 chr14 101385322 101385532 + 10.4 0.000 Intergenic Intergenic 22495 NR_126006 338002 Hs.124848 NR_126006 ENSG00000259023 LINC00524 C14orf71 long intergenic non-protein coding RNA 524 ncRNA chr9-4783 chr9 134098886 134099096 + 10.4 0.000 Intergenic L1MC3|LINE|L1 -30965 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr5-3798 chr5 80297406 80297616 + 10.4 0.000 Intergenic L1MC3|LINE|L1 2967 NR_004845 644936 Hs.627173 NR_004845 LOC644936 - actin beta pseudogene pseudo chr1-5123 chr1 153141791 153142001 + 10.4 0.000 promoter-TSS (NR_003062) promoter-TSS (NR_003062) -403 NR_003062 6702 Hs.2421 NR_003062 SPRR2C - small proline rich protein 2C (pseudogene) pseudo chr1-10582 chr1 175590793 175591003 + 10.4 0.000 intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 152697 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr4-1982 chr4 184362438 184362648 + 10.4 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -8566 NR_040108 728175 Hs.590107 NR_040108 ENSG00000180712 LINC02363 - long intergenic non-protein coding RNA 2363 ncRNA chr3-2648 chr3 14410658 14410868 + 10.4 0.000 intron (NR_103507, intron 1 of 13) intron (NR_103507, intron 1 of 13) 8157 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr2-8136 chr2 81900037 81900247 + 10.4 0.000 Intergenic AluSx1|SINE|Alu -433196 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chrX-2494 chrX 89100159 89100369 + 10.4 0.000 Intergenic L1PBa|LINE|L1 353039 NM_001184771 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr14-2912 chr14 39184657 39184867 + 10.4 0.000 Intergenic AluJo|SINE|Alu 9508 NM_002687 5411 Hs.409965 NM_002687 ENSG00000100941 PNN DRS|DRSP|SDK3|memA pinin, desmosome associated protein protein-coding chr10-5289 chr10 69467292 69467502 + 10.4 0.000 intron (NM_001351263, intron 1 of 5) intron (NM_001351263, intron 1 of 5) 15930 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr1-9605 chr1 45134623 45134833 + 10.4 0.000 intron (NM_020883, intron 1 of 13) intron (NM_020883, intron 1 of 13) 71877 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr5-3273 chr5 110590351 110590561 + 10.4 0.000 intron (NM_001039763, intron 10 of 13) MER1B|DNA|hAT-Charlie -76541 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr8-5209 chr8 114572259 114572469 + 10.4 0.000 Intergenic MER50|LTR|ERV1 1095649 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8-3560 chr8 127865597 127865807 + 10.4 0.000 intron (NR_003367, intron 1 of 8) MLT1D|LTR|ERVL-MaLR 69740 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr4-5947 chr4 156152331 156152541 + 10.4 0.000 Intergenic L1M4b|LINE|L1 -198570 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr19-2061 chr19 10544050 10544260 + 10.4 0.000 non-coding (NR_104024, exon 1 of 10) non-coding (NR_104024, exon 1 of 10) 251 NM_001281504 84971 Hs.512799 NM_032885 ENSG00000130734 ATG4D APG4-D|APG4D|AUTL4 autophagy related 4D cysteine peptidase protein-coding chr1-7756 chr1 35675734 35675944 + 10.4 0.000 Intergenic MER70A|LTR|ERVL -34313 NM_001199779 5690 Hs.471441 NM_002794 ENSG00000126067 PSMB2 HC7-I proteasome subunit beta 2 protein-coding chr20-1964 chr20 34979427 34979637 + 10.4 0.000 intron (NM_020884, intron 6 of 44) intron (NM_020884, intron 6 of 44) -10844 NR_030223 574501 NR_030223 ENSG00000207635 MIR499A MIR499|MIRN499|hsa-mir-499a|mir-499a microRNA 499a ncRNA chr8-3779 chr8 25198991 25199201 + 10.4 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 14407 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr19-1922 chr19 2217270 2217480 + 10.4 0.000 intron (NM_032482, intron 21 of 27) intron (NM_032482, intron 21 of 27) 16774 NR_031596 100302283 NR_031596 ENSG00000221411 MIR1227 MIRN1227|hsa-mir-1227|mir-1227 microRNA 1227 ncRNA chr4-6358 chr4 103051199 103051409 + 10.4 0.000 intron (NM_001370203, intron 3 of 10) intron (NM_001370203, intron 3 of 10) 25457 NM_001370203 133308 Hs.546482 NM_178833 ENSG00000164038 SLC9B2 NHA2|NHE10|NHEDC2 solute carrier family 9 member B2 protein-coding chr20-2187 chr20 49700702 49700912 + 10.4 0.000 intron (NM_004776, intron 1 of 8) MER44B|DNA|TcMar-Tigger 13071 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr2-4792 chr2 38939370 38939580 + 10.4 0.000 intron (NM_001145451, intron 7 of 15) L1MB8|LINE|L1 20112 NM_001145451 100271715 Hs.99841 NM_001145451 ENSG00000214694 ARHGEF33 - Rho guanine nucleotide exchange factor 33 protein-coding chr1-7819 chr1 58508839 58509049 + 10.4 0.000 intron (NM_145243, intron 7 of 8) L1MB1|LINE|L1 37782 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr10-2679 chr10 99611001 99611211 + 10.4 0.000 exon (NM_031212, exon 4 of 4) exon (NM_031212, exon 4 of 4) 9333 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding chr9-6106 chr9 137979306 137979516 + 10.4 0.000 intron (NM_001243812, intron 12 of 45) MLT1F2|LTR|ERVL-MaLR -32351 NR_132978 105376331 NR_132977 LOC105376331 - uncharacterized LOC105376331 ncRNA chr4-8309 chr4 144377222 144377432 + 10.4 0.000 Intergenic Intergenic -236609 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr19-4061 chr19 9625892 9626102 + 10.4 0.000 intron (NR_122038, intron 1 of 3) LTR55|LTR|ERVL? 4515 NR_122038 284385 Hs.651747 NM_001242812 ENSG00000267106 ZNF561-AS1 C19orf82 ZNF561 antisense RNA 1 (head to head) ncRNA chr3-2228 chr3 38629478 38629688 + 10.4 0.000 intron (NM_198056, intron 3 of 27) intron (NM_198056, intron 3 of 27) 20089 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr15-1880 chr15 67361004 67361214 + 10.4 0.000 intron (NM_001031715, intron 8 of 20) intron (NM_001031715, intron 8 of 20) -105911 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding chr20-1713 chr20 38433604 38433814 + 10.4 0.000 TTS (NR_003018) TTS (NR_003018) 290 NR_003018 677840 Hs.653086 NR_003018 ENSG00000200354 SNORA71D U71d small nucleolar RNA, H/ACA box 71D snoRNA chr14-3371 chr14 92406453 92406663 + 10.4 0.000 intron (NM_153647, intron 3 of 17) MSTA-int|LTR|ERVL-MaLR 82750 NM_153646 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr1-3735 chr1 235589381 235589591 + 10.4 0.000 intron (NM_004485, intron 1 of 2) LTR18B|LTR|ERVL 60298 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr2-14579 chr2 231800733 231800943 + 10.4 0.000 intron (NM_001369483, intron 6 of 6) intron (NM_001369483, intron 6 of 6) 14393 NM_022730 64708 Hs.335061 NM_022730 ENSG00000144524 COPS7B CSN7B|SGN7b COP9 signalosome subunit 7B protein-coding chr22-2411 chr22 17964614 17964824 + 10.4 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) 16242 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chrX-1753 chrX 49959847 49960057 + 10.4 0.000 intron (NM_001127899, intron 3 of 14) L2|LINE|L2 37356 NM_001272102 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr2-3976 chr2 73163749 73163959 + 10.4 0.000 Intergenic Intergenic -38720 NM_001134462 344022 Hs.694384 NM_001134462 ENSG00000214513 NOTO - notochord homeobox protein-coding chr17-3377 chr17 81731340 81731550 + 10.4 0.000 Intergenic L1MB7|LINE|L1 19161 NM_012140 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr3-6883 chr3 153895517 153895727 + 10.4 0.000 Intergenic Intergenic -133096 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr6-2563 chr6 42122907 42123117 + 10.4 0.000 intron (NM_001164446, intron 2 of 4) intron (NM_001164446, intron 2 of 4) 19608 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr4-7248 chr4 46567780 46567990 + 10.4 0.000 Intergenic L1PA3|LINE|L1 -177757 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr3-5354 chr3 139111923 139112133 + 10.4 0.000 intron (NR_026783, intron 2 of 2) intron (NR_026783, intron 2 of 2) 7843 NR_026783 60467 Hs.512673 NM_021812 ENSG00000232416 BPESC1 NCRNA00187 blepharophimosis, epicanthus inversus and ptosis candidate 1 ncRNA chr5-3157 chr5 68834755 68834965 + 10.4 0.000 Intergenic Intergenic 195067 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr11-6935 chr11 111002308 111002518 + 10.4 0.000 Intergenic Charlie13b|DNA|hAT-Charlie 94905 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr2-8122 chr2 79928545 79928755 + 10.4 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -62067 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr8-4597 chr8 130236635 130236845 + 10.4 0.000 intron (NM_001362925, intron 4 of 29) intron (NM_001362925, intron 4 of 29) 59793 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr17-5315 chr17 27991186 27991396 + 10.4 0.000 intron (NR_146896, intron 1 of 4) intron (NR_146896, intron 1 of 4) 416 NR_146896 105371708 Hs.385535 NR_146896 LINC01992 - long intergenic non-protein coding RNA 1992 ncRNA chr16-2631 chr16 11867509 11867719 + 10.4 0.000 TTS (NM_001130006) TTS (NM_001130006) -16072 NM_015659 26156 Hs.401842 NM_015659 ENSG00000171490 RSL1D1 CSIG|L12|PBK1|UTP30 ribosomal L1 domain containing 1 protein-coding chr3-2247 chr3 48642180 48642390 + 10.4 0.000 intron (NM_001407, intron 31 of 34) intron (NM_001407, intron 31 of 34) 1995 NR_039956 100616112 NR_039956 ENSG00000284575 MIR4793 - microRNA 4793 ncRNA chr10-6954 chr10 64615038 64615248 + 10.4 0.000 Intergenic AluJr4|SINE|Alu -210385 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr12-5246 chr12 109018048 109018258 + 10.4 0.000 intron (NM_018711, intron 1 of 15) intron (NM_018711, intron 1 of 15) 2915 NM_018711 55530 Hs.4221 NM_018711 ENSG00000166111 SVOP - SV2 related protein protein-coding chr10-2840 chr10 44567591 44567801 + 10.4 0.000 Intergenic L1MD2|LINE|L1 -182599 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr3-5996 chr3 48381389 48381599 + 10.4 0.000 intron (NM_207102, intron 8 of 10) intron (NM_207102, intron 8 of 10) 9275 NM_001159927 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding chr14-2270 chr14 24679088 24679298 + 10.4 0.000 Intergenic Charlie26a|DNA|hAT-Charlie -45003 NR_144343 3002 Hs.1051 NM_004131 ENSG00000100453 GZMB C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B protein-coding chr1-13284 chr1 229098312 229098522 + 10.4 0.000 Intergenic Intergenic 76384 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr22-1852 chr22 38307274 38307484 + 10.4 0.000 intron (NM_001894, intron 2 of 10) AluSg|SINE|Alu 10054 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr11-5520 chr11 86672494 86672704 + 10.4 0.000 promoter-TSS (NR_147831) promoter-TSS (NR_147831) 37 NR_147830 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr22-1092 chr22 31568482 31568692 + 10.4 0.000 intron (NM_001007467, intron 8 of 32) L1MC5a|LINE|L1 52944 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr2-4210 chr2 207054580 207054790 + 10.4 0.000 Intergenic MER5B|DNA|hAT-Charlie 55388 NR_036227 100423036 NR_036227 ENSG00000253008 MIR2355 mir-2355 microRNA 2355 ncRNA chr15-2896 chr15 42744894 42745104 + 10.4 0.000 3' UTR (NM_173500, exon 15 of 15) 3' UTR (NM_173500, exon 15 of 15) -7871 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr21-507 chr21 32618628 32618838 + 10.4 0.000 Intergenic MIR|SINE|MIR -5862 NM_001350335 56683 Hs.5811 NM_017835 ENSG00000159079 CFAP298 C21orf48|C21orf59|CILD26|FBB18|Kur cilia and flagella associated protein 298 protein-coding chr5-4718 chr5 42653312 42653522 + 10.4 0.000 intron (NM_001242403, intron 3 of 9) intron (NM_001242403, intron 3 of 9) 87553 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr1-4056 chr1 204894256 204894466 + 10.4 0.000 intron (NM_001160332, intron 1 of 27) intron (NM_001160332, intron 1 of 27) -49865 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr3-5547 chr3 3171016 3171226 + 10.4 0.000 intron (NM_001173482, intron 4 of 10) intron (NM_001173482, intron 4 of 10) 8596 NM_016302 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr2-3334 chr2 200378342 200378552 + 10.4 0.000 intron (NM_001282743, intron 2 of 11) intron (NM_001282743, intron 2 of 11) 69497 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr10-5369 chr10 73631008 73631218 + 10.4 0.000 TTS (NM_021245) TTS (NM_021245) -5132 NM_001350995 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr11-4167 chr11 57005712 57005922 + 10.4 0.000 Intergenic MER52A|LTR|ERV1 16903 NM_001005323 390181 Hs.554520 NM_001005323 ENSG00000181273 OR5AK2 - olfactory receptor family 5 subfamily AK member 2 protein-coding chr22-1475 chr22 19978937 19979147 + 10.4 0.000 exon (NM_001670, exon 7 of 20) exon (NM_001670, exon 7 of 20) 15289 NR_039918 100616414 NR_039918 ENSG00000284031 MIR4761 - microRNA 4761 ncRNA chr1-4587 chr1 110610563 110610773 + 10.4 0.000 intron (NM_001204269, intron 1 of 4) intron (NM_001204269, intron 1 of 4) -4310 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr11-10762 chr11 134713002 134713212 + 10.4 0.000 Intergenic Intergenic -22838 NR_147836 729305 Hs.148365 NR_147836 ENSG00000251226 LINC02714 - long intergenic non-protein coding RNA 2714 ncRNA chr1-8675 chr1 212488882 212489092 + 10.4 0.000 Intergenic Intergenic 56067 NR_026598 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr2-5255 chr2 55862303 55862513 + 10.4 0.000 Intergenic Intergenic 61374 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chr10-2126 chr10 2972669 2972879 + 10.4 0.000 Intergenic Intergenic 94159 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chrX-1375 chrX 153333543 153333753 + 10.4 0.000 promoter-TSS (NM_001367757) promoter-TSS (NM_001367757) -505 NM_001367757 10838 Hs.348963 NM_020636 ENSG00000063587 ZNF275 - zinc finger protein 275 protein-coding chrX-2529 chrX 97968606 97968816 + 10.4 0.000 Intergenic Intergenic -404176 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr17-3830 chr17 42721083 42721293 + 10.4 0.000 intron (NM_001321079, intron 5 of 19) intron (NM_001321079, intron 5 of 19) -13037 NR_106838 102466195 NR_106838 ENSG00000275273 MIR6780A hsa-mir-6780a microRNA 6780a ncRNA chr4-3628 chr4 13191216 13191426 + 10.4 0.000 Intergenic Intergenic 293019 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr2-12048 chr2 30235020 30235230 + 10.4 0.000 intron (NM_030915, intron 2 of 2) intron (NM_030915, intron 2 of 2) 3591 NM_030915 81606 Hs.567598 NM_030915 ENSG00000213626 LBH - LBH regulator of WNT signaling pathway protein-coding chr9-4001 chr9 32373438 32373648 + 10.4 0.000 Intergenic HERVL40-int|LTR|ERVL -11060 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr14-1729 chr14 53368901 53369111 + 10.4 0.000 Intergenic Intergenic 215652 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr2-8628 chr2 144374318 144374528 + 10.4 0.000 Intergenic Intergenic -41354 NM_001354360 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr1-6570 chr1 33050130 33050340 + 10.4 0.000 Intergenic MER44B|DNA|TcMar-Tigger -13324 NM_001319140 204 Hs.470907 NM_001625 ENSG00000004455 AK2 ADK2 adenylate kinase 2 protein-coding chr5-8360 chr5 121510710 121510920 + 10.4 0.000 Intergenic Intergenic 188265 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr3-10225 chr3 122255035 122255245 + 10.4 0.000 intron (NM_001178065, intron 2 of 6) CR1-3_Croc|LINE|CR1 -70108 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr12-2516 chr12 91381430 91381640 + 10.4 0.000 Intergenic Intergenic -198718 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr7-3731 chr7 66959095 66959305 + 10.4 0.000 TTS (NM_017994) TTS (NM_017994) 36386 NM_016038 51119 Hs.110445 NM_016038 ENSG00000126524 SBDS CGI-97|SDS|SWDS SBDS ribosome maturation factor protein-coding chr14-943 chr14 32939958 32940168 + 10.4 0.000 intron (NM_001165893, intron 1 of 10) intron (NM_001165893, intron 1 of 10) 1184 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr6-4672 chr6 52877274 52877484 + 10.4 0.000 Intergenic Intergenic -31284 NM_153699 221357 Hs.646984 NM_153699 ENSG00000182793 GSTA5 - glutathione S-transferase alpha 5 protein-coding chr7-1239 chr7 141551366 141551576 + 10.4 0.000 promoter-TSS (NM_001364948) promoter-TSS (NM_001364948) 61 NM_018238 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr19-7086 chr19 55934993 55935203 + 10.4 0.000 Intergenic Intergenic -2762 NM_001321057 126204 Hs.446924 NM_176810 ENSG00000173572 NLRP13 CLR19.7|NALP13|NOD14|PAN13 NLR family pyrin domain containing 13 protein-coding chr2-3923 chr2 55111796 55112006 + 10.4 0.000 intron (NM_001321904, intron 1 of 9) intron (NM_001321904, intron 1 of 9) 25930 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr6-2285 chr6 83198820 83199030 + 10.4 0.000 TTS (NM_001322336) TTS (NM_001322336) -5025 NM_001199917 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr5-2229 chr5 845258 845468 + 10.4 0.000 intron (NM_024786, intron 3 of 12) intron (NM_024786, intron 3 of 12) 5623 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr15-4500 chr15 51441473 51441683 + 10.4 0.000 Intergenic L1MA1|LINE|L1 64332 NM_001330297 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr11-3544 chr11 17988101 17988311 + 10.4 0.000 intron (NR_104040, intron 8 of 11) intron (NR_104040, intron 8 of 11) 24841 NM_012139 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr22-1133 chr22 41952788 41952998 + 10.4 0.000 intron (NR_024355, intron 1 of 1) intron (NR_024355, intron 1 of 1) 706 NR_024355 339674 Hs.517656 NR_024355 ENSG00000205704 LINC00634 BK250D10.8 long intergenic non-protein coding RNA 634 ncRNA chr3-1600 chr3 187767615 187767825 + 10.4 0.000 Intergenic Intergenic -22252 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr6-5819 chr6 19022094 19022304 + 10.4 0.000 Intergenic MER5A|DNA|hAT-Charlie 158281 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr6-1478 chr6 43505672 43505882 + 10.4 0.000 exon (NM_001146018, exon 11 of 11) exon (NM_001146018, exon 11 of 11) 4566 NM_001012974 221424 Hs.445552 NM_001012974 ENSG00000204052 LRRC73 C6orf154 leucine rich repeat containing 73 protein-coding chr12-4459 chr12 13671572 13671782 + 10.4 0.000 intron (NM_000834, intron 4 of 12) intron (NM_000834, intron 4 of 12) -294932 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr6-4176 chr6 1774807 1775017 + 10.4 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 164997 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr14-1994 chr14 52023591 52023801 + 10.4 0.000 intron (NM_007361, intron 12 of 21) intron (NM_007361, intron 12 of 21) 34150 NM_016039 51637 Hs.534457 NM_016039 ENSG00000087302 RTRAF C14orf166|CGI-99|CGI99|CLE|CLE7|LCRP369|RLLM1|hCLE|hCLE1 RNA transcription, translation and transport factor protein-coding chr1-10896 chr1 207049809 207050019 + 10.4 0.000 intron (NM_001276320, intron 3 of 3) intron (NM_001276320, intron 3 of 3) 1163 NM_018566 55432 Hs.567533 NM_018566 ENSG00000180667 YOD1 DUBA8|OTUD2|PRO0907 YOD1 deubiquitinase protein-coding chr21-851 chr21 29671992 29672202 + 10.4 0.000 intron (NM_000830, intron 4 of 16) AluSp|SINE|Alu 76057 NR_033368 100379661 Hs.659368 NR_033368 ENSG00000156273 GRIK1-AS2 C21orf41|NCRNA00258 GRIK1 antisense RNA 2 ncRNA chrX-439 chrX 70481344 70481554 + 10.4 0.000 intron (NM_020730, intron 4 of 13) MER103C|DNA|hAT-Charlie -25455 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr11-6131 chr11 40197307 40197517 + 10.4 0.000 intron (NM_020929, intron 3 of 4) intron (NM_020929, intron 3 of 4) 95718 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr19-2297 chr19 4548983 4549193 + 10.4 0.000 intron (NM_032108, intron 12 of 16) AluSz|SINE|Alu -9052 NM_052972 116844 Hs.655559 NM_052972 ENSG00000171236 LRG1 HMFT1766|LRG leucine rich alpha-2-glycoprotein 1 protein-coding chr11-7176 chr11 129868524 129868734 + 10.4 0.000 intron (NM_001143835, intron 24 of 26) intron (NM_001143835, intron 24 of 26) 24380 NM_006165 4798 Hs.530539 NM_006165 ENSG00000170322 NFRKB INO80G nuclear factor related to kappaB binding protein protein-coding chr15-1387 chr15 34047518 34047728 + 10.4 0.000 intron (NM_012125, intron 2 of 2) L1PA11|LINE|L1 -8419 NM_020371 57099 Hs.555966 NM_020371 ENSG00000169857 AVEN PDCD12 apoptosis and caspase activation inhibitor protein-coding chr5-4509 chr5 12748036 12748246 + 10.4 0.000 intron (NR_033383, intron 3 of 3) intron (NR_033383, intron 3 of 3) 80282 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr8-3442 chr8 84801113 84801323 + 10.4 0.000 intron (NM_001354322, intron 3 of 6) intron (NM_001354322, intron 3 of 6) 95291 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr3-3146 chr3 161409089 161409299 + 10.4 0.000 Intergenic Intergenic -17233 NR_102265 101243545 Hs.737526 NR_102265 ENSG00000240567 LINC02067 - long intergenic non-protein coding RNA 2067 ncRNA chr10-7106 chr10 96787416 96787626 + 10.4 0.000 Intergenic L1ME3G|LINE|L1 37255 NR_026712 728658 Hs.645344 NR_026712 ENSG00000236552 RPL13AP5 RPL13A_8_1086|bA196N24.2 ribosomal protein L13a pseudogene 5 pseudo chr2-8915 chr2 182548183 182548393 + 10.4 0.000 Intergenic Intergenic -25443 NM_001003683 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr11-2696 chr11 111937262 111937472 + 10.4 0.000 promoter-TSS (NM_001037954) promoter-TSS (NM_001037954) 24 NM_001037954 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr5-2489 chr5 149367565 149367775 + 10.4 0.000 intron (NM_001301057, intron 5 of 5) intron (NM_001301057, intron 5 of 5) 9624 NM_001301054 78991 Hs.644397 NM_024028 ENSG00000145882 PCYOX1L - prenylcysteine oxidase 1 like protein-coding chr11-4143 chr11 45646529 45646739 + 10.4 0.000 Intergenic Intergenic 18988 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr10-3310 chr10 3009608 3009818 + 10.4 0.000 Intergenic MIR|SINE|MIR 57220 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr2-8292 chr2 103312378 103312588 + 10.4 0.000 Intergenic Intergenic -328054 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr10-3626 chr10 95793156 95793366 + 10.4 0.000 intron (NR_038444, intron 4 of 5) intron (NR_038444, intron 4 of 5) 37098 NM_001776 953 Hs.576612 NM_001776 ENSG00000138185 ENTPD1 ATPDase|CD39|NTPDase-1|SPG64 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding chr12-3289 chr12 74999722 74999932 + 10.4 0.000 Intergenic Intergenic 209921 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding chr13-1697 chr13 85558188 85558398 + 10.4 0.000 Intergenic Intergenic 194690 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr10-5386 chr10 74323135 74323345 + 10.4 0.000 intron (NM_001369124, intron 4 of 9) Charlie2a|DNA|hAT-Charlie 146477 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr3-5068 chr3 42504575 42504785 + 10.4 0.000 intron (NM_001251884, intron 1 of 11) intron (NM_001251884, intron 1 of 11) 2037 NM_004624 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr6-4044 chr6 131831418 131831628 + 10.4 0.000 intron (NM_006208, intron 1 of 24) L1MC3|LINE|L1 23503 NM_006208 5167 Hs.527295 NM_006208 ENSG00000197594 ENPP1 ARHR2|COLED|M6S1|NPP1|NPPS|PC-1|PCA1|PDNP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding KI270742.1-4 KI270742.1 135405 135615 + 10.4 0.000 NA NA NA NA chr2-3727 chr2 237280363 237280573 + 10.4 0.000 Intergenic Intergenic 133696 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr6-1904 chr6 16215546 16215756 + 10.4 0.000 Intergenic Intergenic -22936 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr6-5198 chr6 131789351 131789561 + 10.4 0.000 Intergenic L2a|LINE|L2 -2716 NR_039610 100616455 NR_039610 ENSG00000266807 MIR548H5 - microRNA 548h-5 ncRNA chr10-2361 chr10 92699534 92699744 + 10.4 0.000 Intergenic CpG 9684 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr14-1516 chr14 53956550 53956760 + 10.4 0.000 5' UTR (NM_001202, exon 1 of 4) 5' UTR (NM_001202, exon 1 of 4) 170 NM_001202 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr3-6496 chr3 112319577 112319787 + 10.4 0.000 intron (NR_147411, intron 1 of 4) L1MEg1|LINE|L1 -12891 NM_001365855 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding chr2-9165 chr2 212737315 212737525 + 10.4 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -57911 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr3-9980 chr3 98218578 98218788 + 10.4 0.000 Intergenic Intergenic -45561 NM_001005479 79295 Hs.554712 NM_001005479 ENSG00000230301 OR5H6 OR3-11 olfactory receptor family 5 subfamily H member 6 (gene/pseudogene) protein-coding chr1-11678 chr1 3135960 3136170 + 10.4 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 8090 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr20-4238 chr20 48414283 48414493 + 10.4 0.000 Intergenic Intergenic 54477 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr20-2216 chr20 61768244 61768454 + 10.4 0.000 intron (NM_001252339, intron 2 of 14) intron (NM_001252339, intron 2 of 14) -48601 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr1-4803 chr1 20154578 20154788 + 10.4 0.000 Intergenic HERVE-int|LTR|ERV1 15360 NM_022819 64600 Hs.302034 NM_022819 ENSG00000158786 PLA2G2F GIIFsPLA2|sPLA2-IIF phospholipase A2 group IIF protein-coding chr12-7728 chr12 92078121 92078331 + 10.4 0.000 intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 63487 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr5-4546 chr5 18106361 18106571 + 10.4 0.000 Intergenic Intergenic 299192 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chrX-2458 chrX 82263692 82263902 + 10.4 0.000 Intergenic MER84-int|LTR|ERV1 1061695 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr13-1341 chr13 42047156 42047366 + 10.4 0.000 intron (NM_001204504, intron 1 of 29) intron (NM_001204504, intron 1 of 29) -1387 NM_152910 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr1-5977 chr1 39185783 39185993 + 10.4 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 101721 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr5-2080 chr5 172958635 172958845 + 10.4 0.000 promoter-TSS (NM_016093) promoter-TSS (NM_016093) 11 NM_001317981 51121 Hs.546390 NM_016093 ENSG00000037241 RPL26L1 RPL26P1 ribosomal protein L26 like 1 protein-coding chr7-2313 chr7 100450591 100450801 + 10.4 0.000 Intergenic Intergenic 13564 NM_001004323 402573 Hs.632306 NM_001004323 ENSG00000185955 C7orf61 - chromosome 7 open reading frame 61 protein-coding chr11-6416 chr11 65727613 65727823 + 10.4 0.000 Intergenic Intergenic -6780 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr12-3695 chr12 2764684 2764894 + 10.4 0.000 intron (NR_146317, intron 3 of 3) intron (NR_146317, intron 3 of 3) -30181 NM_002014 2288 Hs.524183 NM_002014 ENSG00000004478 FKBP4 FKBP51|FKBP52|FKBP59|HBI|Hsp56|PPIase|p52 FKBP prolyl isomerase 4 protein-coding chr20-2309 chr20 6767690 6767900 + 10.4 0.000 5' UTR (NM_001200, exon 1 of 3) 5' UTR (NM_001200, exon 1 of 3) 109 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr15-3144 chr15 66908911 66909121 + 10.4 0.000 Intergenic Intergenic 47499 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr12-7488 chr12 66775962 66776172 + 10.4 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) 28202 NM_001366723 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr14-5316 chr14 101740916 101741126 + 10.4 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 10584 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr2-3619 chr2 110648061 110648271 + 10.4 0.000 intron (NM_001278616, intron 18 of 23) L1MC2|LINE|L1 10083 NR_132975 106635550 NR_132975 SNORD132 - small nucleolar RNA, C/D box 132 snoRNA chr9-3992 chr9 17699308 17699518 + 10.4 0.000 intron (NM_003026, intron 1 of 8) intron (NM_003026, intron 1 of 8) 120347 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr8-2189 chr8 123000967 123001177 + 10.4 0.000 Intergenic MIRb|SINE|MIR 24700 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr8-3583 chr8 134581076 134581286 + 10.4 0.000 intron (NM_020863, intron 10 of 15) intron (NM_020863, intron 10 of 15) -16890 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr15-3168 chr15 68619023 68619233 + 10.4 0.000 intron (NM_001190456, intron 1 of 11) intron (NM_001190456, intron 1 of 11) 2588 NM_001190456 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr7-9507 chr7 138200589 138200799 + 10.4 0.000 Intergenic L1P4|LINE|L1 76936 NR_039678 100616226 NR_039678 ENSG00000284028 MIR4468 - microRNA 4468 ncRNA chr14-3755 chr14 48221359 48221569 + 10.4 0.000 Intergenic Intergenic -426450 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr21-621 chr21 39198921 39199131 + 10.4 0.000 exon (NM_033656, exon 40 of 41) exon (NM_033656, exon 40 of 41) -15512 NM_001261824 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chrX-4413 chrX 53379824 53380034 + 10.4 0.000 3' UTR (NM_006306, exon 25 of 25) 3' UTR (NM_006306, exon 25 of 25) 25836 NR_106916 102465516 NR_106916 ENSG00000278204 MIR6857 hsa-mir-6857 microRNA 6857 ncRNA chr3-5827 chr3 31218592 31218802 + 10.4 0.000 Intergenic Intergenic -56910 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr11-8557 chr11 133068200 133068410 + 10.4 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -124537 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr9-4474 chr9 33236221 33236431 + 10.4 0.000 Intergenic L2c|LINE|L2 -3841 NM_014471 27290 Hs.555934 NM_014471 ENSG00000122711 SPINK4 HEL136|PEC-60|PEC60 serine peptidase inhibitor, Kazal type 4 protein-coding chr2-8248 chr2 98708974 98709184 + 10.4 0.000 intron (NM_012214, intron 2 of 15) MIRb|SINE|MIR 22053 NM_012214 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding chr5-6135 chr5 34992231 34992441 + 10.4 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 55613 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr11-6282 chr11 59845524 59845734 + 10.4 0.000 promoter-TSS (NM_005142) promoter-TSS (NM_005142) -130 NM_005142 2694 Hs.110014 NM_005142 ENSG00000134812 CBLIF GIF|IF|IFMH|INF|TCN3 cobalamin binding intrinsic factor protein-coding chr3-4865 chr3 163275802 163276012 + 10.4 0.000 intron (NR_033945, intron 2 of 6) intron (NR_033945, intron 2 of 6) 27394 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr6-4644 chr6 48471571 48471781 + 10.4 0.000 Intergenic Intergenic -402987 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr9-2366 chr9 114220172 114220382 + 10.4 0.000 intron (NM_032888, intron 13 of 60) intron (NM_032888, intron 13 of 60) 10843 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr8-2817 chr8 125553567 125553777 + 10.4 0.000 Intergenic L1PB4|LINE|L1 121463 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chrX-4850 chrX 103847597 103847807 + 10.4 0.000 Intergenic LTR33|LTR|ERVL -15420 NR_146560 51209 Hs.522736 NM_016370 ENSG00000123570 RAB9B RAB9L|Rab-9L RAB9B, member RAS oncogene family protein-coding chr8-5173 chr8 99129920 99130130 + 10.4 0.000 intron (NM_017890, intron 8 of 61) AluJr|SINE|Alu 116759 NM_015243 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr6-2638 chr6 158500041 158500251 + 10.4 0.000 intron (NM_001007466, intron 12 of 12) intron (NM_001007466, intron 12 of 12) -36290 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr3-6649 chr3 128474539 128474749 + 10.4 0.000 Intergenic Intergenic -7396 NM_153330 165721 Hs.518241 NM_153330 ENSG00000179407 DNAJB8 CT156|DJ6 DnaJ heat shock protein family (Hsp40) member B8 protein-coding chr10-3425 chr10 35869336 35869546 + 10.4 0.000 Intergenic AluSz|SINE|Alu 91139 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr18-1144 chr18 9094309 9094519 + 10.4 0.000 Intergenic Intergenic -8285 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr2-9452 chr2 234359936 234360146 + 10.4 0.000 Intergenic L1PREC2|LINE|L1 94554 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr10-4971 chr10 29741255 29741465 + 10.4 0.000 Intergenic Intergenic -4424 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr1-3370 chr1 116570440 116570650 + 10.4 0.000 intron (NM_001779, intron 1 of 5) CpG 481 NR_026665 965 Hs.34341 NM_001779 ENSG00000116815 CD58 LFA-3|LFA3|ag3 CD58 molecule protein-coding chr20-3925 chr20 32871176 32871386 + 10.4 0.000 intron (NM_001143967, intron 3 of 26) AluJo|SINE|Alu 12358 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr16-1811 chr16 30136103 30136313 + 10.4 0.000 Intergenic AluSc|SINE|Alu -12899 NM_001109891 5595 Hs.861 NM_002746 ENSG00000102882 MAPK3 ERK-1|ERK1|ERT2|HS44KDAP|HUMKER1A|P44ERK1|P44MAPK|PRKM3|p44-ERK1|p44-MAPK mitogen-activated protein kinase 3 protein-coding chr2-8177 chr2 86748059 86748269 + 10.4 0.000 intron (NM_022780, intron 2 of 8) intron (NM_022780, intron 2 of 8) -27042 NM_001198954 100526767 Hs.591582 NM_001198954 ENSG00000249884 RNF103-CHMP3 CGI149|CHMP3|NEDF|RNF103-VPS24|VPS24|hVps24 RNF103-CHMP3 readthrough protein-coding chr22-2836 chr22 43863935 43864145 + 10.4 0.000 Intergenic Intergenic -1527 NM_014351 25830 Hs.189810 NM_014351 ENSG00000130540 SULT4A1 BR-STL-1|BRSTL1|DJ388M5.3|NST|SULTX3|hBR-STL-1 sulfotransferase family 4A member 1 protein-coding chr8-3851 chr8 32120899 32121109 + 10.4 0.000 intron (NR_104156, intron 3 of 3) intron (NR_104156, intron 3 of 3) 94786 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr3-4167 chr3 126472475 126472685 + 10.4 0.000 intron (NR_104249, intron 1 of 8) MER106B|DNA|hAT-Charlie 3311 NR_104249 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr3-1215 chr3 58177679 58177889 + 10.4 0.000 Intergenic CpG -7149 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr1-3173 chr1 91585978 91586188 + 10.4 0.000 Intergenic Intergenic 84975 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr3-2905 chr3 50164125 50164335 + 10.4 0.000 intron (NM_001318798, intron 2 of 17) intron (NM_001318798, intron 2 of 17) 5211 NM_001318800 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chr5-2824 chr5 40046447 40046657 + 10.4 0.000 Intergenic Intergenic -5739 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr16-1901 chr16 88274492 88274702 + 10.4 0.000 Intergenic Intergenic 80316 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr17-3409 chr17 5467843 5468053 + 10.4 0.000 intron (NM_020162, intron 1 of 11) intron (NM_020162, intron 1 of 11) 1034 NM_001199699 56919 Hs.250456 NM_020162 ENSG00000005100 DHX33 DDX33 DEAH-box helicase 33 protein-coding chr5-4644 chr5 35331341 35331551 + 10.4 0.000 Intergenic THE1B|LTR|ERVL-MaLR -100959 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr10-2551 chr10 63865353 63865563 + 10.4 0.000 Intergenic Intergenic -343568 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr8-4397 chr8 105140023 105140233 + 10.4 0.000 Intergenic Intergenic -178310 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr2-6539 chr2 210395193 210395403 + 10.4 0.000 intron (NR_110606, intron 1 of 4) L1MC4a|LINE|L1 70586 NR_110606 102724820 Hs.659232 NR_110604 LANCL1-AS1 LANCLOT LANCL1 antisense RNA 1 ncRNA chr6-5070 chr6 115672571 115672781 + 10.4 0.000 Intergenic L2a|LINE|L2 -28841 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr8-4131 chr8 74194401 74194611 + 10.4 0.000 Intergenic Intergenic 126855 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr3-2082 chr3 8111238 8111448 + 10.4 0.000 Intergenic Intergenic -95036 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr17-4008 chr17 74346195 74346405 + 10.4 0.000 intron (NM_153209, intron 7 of 19) intron (NM_153209, intron 7 of 19) 15568 NM_001080466 388419 NM_001080466 ENSG00000204347 BTBD17 BTBD17A|LGALS3BPL|TANGO10A BTB domain containing 17 protein-coding chr1-11104 chr1 229942602 229942812 + 10.4 0.000 Intergenic Intergenic -48799 NR_146475 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr8-1373 chr8 143462576 143462786 + 10.4 0.000 intron (NM_015117, intron 9 of 11) intron (NM_015117, intron 9 of 11) -31949 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr19-3001 chr19 44838171 44838381 + 10.4 0.000 Intergenic AluSx|SINE|Alu -8021 NM_001042724 5819 Hs.655455 NM_002856 ENSG00000130202 NECTIN2 CD112|HVEB|PRR2|PVRL2|PVRR2 nectin cell adhesion molecule 2 protein-coding chr16-2786 chr16 46961952 46962162 + 10.4 0.000 intron (NM_005880, intron 6 of 8) intron (NM_005880, intron 6 of 8) 11617 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr17-6105 chr17 81023862 81024072 + 10.4 0.000 Intergenic Intergenic 10752 NR_026857 440465 Hs.448889 NM_001004336 ENSG00000226137 BAIAP2-DT BAIAP2-AS1|lnc-BAIAP2 BAIAP2 divergent transcript ncRNA chr15-4212 chr15 26175502 26175712 + 10.4 0.000 Intergenic LTR29|LTR|ERV1 59794 NR_038851 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr3-3994 chr3 57591872 57592082 + 10.4 0.000 intron (NM_001660, intron 1 of 5) L1MB7|LINE|L1 5367 NM_001660 378 Hs.652183 NM_001660 ENSG00000168374 ARF4 ARF2 ADP ribosylation factor 4 protein-coding chr12-4659 chr12 46267905 46268115 + 10.4 0.000 promoter-TSS (NM_001278390) promoter-TSS (NM_001278390) -23 NM_001278390 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr7-3565 chr7 20132671 20132881 + 10.4 0.000 intron (NR_110114, intron 1 of 5) intron (NR_110114, intron 1 of 5) 7650 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr6-3282 chr6 156596427 156596637 + 10.4 0.000 Intergenic Intergenic -181323 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr1-4492 chr1 20702466 20702676 + 10.4 0.000 intron (NM_001122819, intron 5 of 14) L2c|LINE|L2 15436 NM_020816 57576 Hs.130411 NM_020816 ENSG00000117245 KIF17 KIF17B|KIF3X|KLP-2|OSM-3 kinesin family member 17 protein-coding chr3-3030 chr3 115402307 115402517 + 10.4 0.000 Intergenic Intergenic -221098 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr7-9528 chr7 139769584 139769794 + 10.4 0.000 intron (NM_001113239, intron 1 of 14) intron (NM_001113239, intron 1 of 14) 8309 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr10-1832 chr10 17229184 17229394 + 10.4 0.000 5' UTR (NM_003380, exon 2 of 10) 5' UTR (NM_003380, exon 2 of 10) 696 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr7-4810 chr7 95632588 95632798 + 10.4 0.000 Intergenic Intergenic -36177 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase 4 protein-coding chr19-4895 chr19 40822947 40823157 + 10.4 0.000 Intergenic LTR5B|LTR|ERVK -11952 NR_144551 171523 Hs.656713 NR_144551 ENSG00000233622 CYP2T1P CYP2T2P cytochrome P450 family 2 subfamily T member 1, pseudogene pseudo chr10-3402 chr10 30454995 30455205 + 10.4 0.000 intron (NM_001244134, intron 5 of 7) intron (NM_001244134, intron 5 of 7) 20454 NM_001320961 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding chr4-4046 chr4 3086162 3086372 + 10.4 0.000 intron (NM_002111, intron 1 of 66) MER104|DNA|TcMar-Tc2 11586 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr1-9449 chr1 34734005 34734215 + 10.4 0.000 Intergenic Intergenic -20937 NM_005268 2709 Hs.198249 NM_005268 ENSG00000189280 GJB5 CX31.1 gap junction protein beta 5 protein-coding chr5-2802 chr5 9623035 9623245 + 10.4 0.000 Intergenic L1MB4|LINE|L1 7211 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr12-7811 chr12 99036395 99036605 + 10.4 0.000 intron (NM_152788, intron 17 of 25) Kanga1c|DNA|TcMar-Tc2 -56859 NR_110095 101928937 Hs.555499 NR_110095 ENSG00000258039 LOC101928937 - uncharacterized LOC101928937 ncRNA chr1-5941 chr1 25140540 25140750 + 10.4 0.000 Intergenic Intergenic 91857 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr1-5934 chr1 23756805 23757015 + 10.4 0.000 intron (NM_003198, intron 9 of 10) intron (NM_003198, intron 9 of 10) 13544 NM_003198 6924 Hs.15535 NM_003198 ENSG00000011007 ELOA SIII|SIII p110|TCEB3|TCEB3A elongin A protein-coding chr13-3142 chr13 90170342 90170552 + 10.4 0.000 Intergenic Intergenic -50730 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr19-2204 chr19 35031445 35031655 + 10.4 0.000 5' UTR (NM_001321605, exon 1 of 6) 5' UTR (NM_001321605, exon 1 of 6) 279 NM_001321605 6324 Hs.436646 NM_001037 ENSG00000105711 SCN1B ATFB13|BRGDA5|EIEE52|GEFSP1 sodium voltage-gated channel beta subunit 1 protein-coding chr4-4882 chr4 116750465 116750675 + 10.4 0.000 Intergenic Intergenic 335006 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr11-5416 chr11 68418751 68418961 + 10.4 0.000 intron (NM_002335, intron 13 of 22) intron (NM_002335, intron 13 of 22) -41896 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr18-1864 chr18 25394347 25394557 + 10.4 0.000 Intergenic L1MEc|LINE|L1 -42286 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr3-10434 chr3 131930698 131930908 + 10.4 0.000 intron (NM_001289112, intron 1 of 15) intron (NM_001289112, intron 1 of 15) 55128 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr13-4396 chr13 109552442 109552652 + 10.4 0.000 Intergenic Intergenic 151851 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr1-4916 chr1 41678311 41678521 + 10.4 0.000 intron (NM_001127714, intron 1 of 7) intron (NM_001127714, intron 1 of 7) -193733 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr21-489 chr21 9751170 9751380 + 10.4 0.000 Intergenic HERVL32-int|LTR|ERVL 69786 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr12-5115 chr12 96828402 96828612 + 10.4 0.000 intron (NM_001306084, intron 65 of 67) intron (NM_001306084, intron 65 of 67) -78750 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr4-2759 chr4 10381347 10381557 + 10.4 0.000 Intergenic Intergenic 75974 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr13-2171 chr13 113367048 113367258 + 10.4 0.000 Intergenic Intergenic -3005 NM_001286732 79774 Hs.745043 NM_024719 ENSG00000139835 GRTP1 TBC1D6 growth hormone regulated TBC protein 1 protein-coding chrX-1289 chrX 115345282 115345492 + 10.4 0.000 Intergenic Intergenic 55672 NM_016383 51213 Hs.242183 NM_016383 ENSG00000102021 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding chr9-3869 chr9 132993540 132993750 + 10.4 0.000 Intergenic Intergenic 14951 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chrX-495 chrX 47227175 47227385 + 10.4 0.000 intron (NM_006201, intron 13 of 15) intron (NM_006201, intron 13 of 15) 4262 NM_001170460 5127 Hs.496068 NM_006201 ENSG00000102225 CDK16 PCTAIRE|PCTAIRE1|PCTGAIRE|PCTK1 cyclin dependent kinase 16 protein-coding chr11-9198 chr11 37179161 37179371 + 10.4 0.000 Intergenic MER4D|LTR|ERV1 -580987 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chrX-602 chrX 134432047 134432257 + 10.4 0.000 Intergenic Intergenic -28013 NM_000194 3251 Hs.412707 NM_000194 ENSG00000165704 HPRT1 HGPRT|HPRT hypoxanthine phosphoribosyltransferase 1 protein-coding chr10-4188 chr10 100579716 100579926 + 10.4 0.000 Intergenic Intergenic 43878 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr18-2989 chr18 24181633 24181843 + 10.4 0.000 intron (NM_001242508, intron 6 of 15) MER57E1|LTR|ERV1 42254 NM_138644 26256 Hs.511983 NM_012189 ENSG00000154040 CABYR CABYRa|CABYRc|CABYRc/d|CABYRe|CBP86|CT88|FSP-2|FSP2 calcium binding tyrosine phosphorylation regulated protein-coding chr1-4892 chr1 36115912 36116122 + 10.4 0.000 intron (NM_005202, intron 1 of 3) AluJr|SINE|Alu 9205 NM_005202 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr2-9110 chr2 205889191 205889401 + 10.4 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 196878 NM_017759 54891 Hs.445036 NM_017759 ENSG00000114933 INO80D - INO80 complex subunit D protein-coding chr1-14259 chr1 36832831 36833041 + 10.4 0.000 intron (NM_000831, intron 10 of 15) L2b|LINE|L2 201579 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr2-12635 chr2 73349257 73349467 + 10.4 0.000 Intergenic L1ME3A|LINE|L1 -36396 NM_015120 7840 Hs.184720 NM_015120 ENSG00000116127 ALMS1 ALSS ALMS1 centrosome and basal body associated protein protein-coding chr8-5056 chr8 28601058 28601268 + 10.4 0.000 Intergenic Intergenic -95981 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr16-2757 chr16 3165918 3166128 + 10.4 0.000 Intergenic LTR13|LTR|ERVK 21732 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chr9-4201 chr9 36128324 36128534 + 10.4 0.000 Intergenic Intergenic -8107 NR_104641 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr13-2428 chr13 45810711 45810921 + 10.4 0.000 intron (NM_198849, intron 1 of 1) intron (NM_198849, intron 1 of 1) 40937 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr6-5659 chr6 89694454 89694664 + 10.4 0.000 intron (NM_014611, intron 61 of 101) AluJb|SINE|Alu -55812 NM_020466 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chr8-2015 chr8 101342286 101342496 + 10.4 0.000 Intergenic Intergenic -26502 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr6-2826 chr6 160162326 160162536 + 10.4 0.000 Intergenic Intergenic 40600 NM_153187 6580 Hs.117367 NM_003057 ENSG00000175003 SLC22A1 HOCT1|OCT1|oct1_cds solute carrier family 22 member 1 protein-coding chr19-4724 chr19 19296355 19296565 + 10.4 0.000 intron (NM_172231, intron 8 of 13) AluY|SINE|Alu -23159 NM_001001524 53345 Hs.531624 NM_203510 ENSG00000213996 TM6SF2 - transmembrane 6 superfamily member 2 protein-coding chr5-4978 chr5 79895375 79895585 + 10.4 0.000 Intergenic MER4D|LTR|ERV1 -41099 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr11-5310 chr11 47135223 47135433 + 10.4 0.000 intron (NM_001003677, intron 3 of 8) MIRb|SINE|MIR 41551 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr11-4381 chr11 76169810 76170020 + 10.4 0.000 Intergenic Intergenic 36587 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr22-2536 chr22 25514538 25514748 + 10.4 0.000 Intergenic MIR3|SINE|MIR -50032 NM_001362778 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr17-3904 chr17 51341335 51341545 + 10.4 0.000 non-coding (NR_122104, exon 3 of 3) non-coding (NR_122104, exon 3 of 3) 4725 NR_122104 440446 Hs.626751 NR_122104 ENSG00000267452 LINC02072 - long intergenic non-protein coding RNA 2072 ncRNA chr15-4459 chr15 48073512 48073722 + 10.4 0.000 Intergenic MSTB|LTR|ERVL-MaLR -47373 NM_205850 283652 Hs.710240 NM_205850 ENSG00000188467 SLC24A5 JSX|NCKX5|OCA6|SHEP4 solute carrier family 24 member 5 protein-coding chr9-3850 chr9 130923418 130923628 + 10.4 0.000 intron (NM_001145106, intron 5 of 7) intron (NM_001145106, intron 5 of 7) 15545 NM_001145106 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr9-1807 chr9 75509279 75509489 + 10.4 0.000 Intergenic (ATTT)n|Simple_repeat|Simple_repeat -381260 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr15-1901 chr15 77026077 77026287 + 10.4 0.000 intron (NR_135552, intron 5 of 11) CR1-3_Croc|LINE|CR1 31056 NM_001321136 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chr20-774 chr20 46375907 46376117 + 10.4 0.000 intron (NM_133171, intron 11 of 21) intron (NM_133171, intron 11 of 21) -11554 NM_001281458 51006 Hs.593344 NM_015945 ENSG00000080189 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 member C2 protein-coding chr10-1370 chr10 132751905 132752115 + 10.4 0.000 intron (NM_005539, intron 11 of 15) intron (NM_005539, intron 11 of 15) 34137 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr20-1062 chr20 18001526 18001736 + 10.4 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 32613 NM_001310338 92667 Hs.320823 NM_052865 ENSG00000125871 MGME1 C20orf72|DDK1|MTDPS11|bA504H3.4 mitochondrial genome maintenance exonuclease 1 protein-coding chr7-3072 chr7 762438 762648 + 10.4 0.000 intron (NR_075098, intron 7 of 12) intron (NR_075098, intron 7 of 12) -34867 NM_001164758 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr5-2504 chr5 151661282 151661492 + 10.4 0.000 3' UTR (NM_003118, exon 10 of 10) 3' UTR (NM_003118, exon 10 of 10) -15558 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr2-3849 chr2 33373966 33374176 + 10.4 0.000 intron (NM_206943, intron 31 of 33) intron (NM_206943, intron 31 of 33) -44445 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr6-2870 chr6 5260221 5260431 + 10.4 0.000 promoter-TSS (NM_001318872) promoter-TSS (NM_001318872) 624 NR_134856 57128 Hs.387755 NM_020408 ENSG00000214113 LYRM4 C6orf149|CGI-203|COXPD19|ISD11 LYR motif containing 4 protein-coding GL000225.1-71 GL000225.1 129119 129329 + 10.4 0.000 NA NA NA NA chr13-3336 chr13 69436331 69436541 + 10.4 0.000 Intergenic L1PA5|LINE|L1 214090 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr2-8979 chr2 190621083 190621293 + 10.4 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -27707 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr12-6580 chr12 122482609 122482819 + 10.4 0.000 intron (NM_001350938, intron 4 of 10) intron (NM_001350938, intron 4 of 10) 18218 NM_001350937 55596 Hs.37706 NM_017612 ENSG00000033030 ZCCHC8 - zinc finger CCHC-type containing 8 protein-coding chr10-3436 chr10 43249429 43249639 + 10.4 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) 17531 NM_145313 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr7-4271 chr7 5849850 5850060 + 10.4 0.000 intron (NR_023382, intron 6 of 6) intron (NR_023382, intron 6 of 6) 26795 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr2-9437 chr2 233542781 233542991 + 10.4 0.000 intron (NM_001365479, intron 8 of 31) L1M5|LINE|L1 22687 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr1-11632 chr1 242471202 242471412 + 10.4 0.000 intron (NM_001320272, intron 2 of 10) intron (NM_001320272, intron 2 of 10) -21825 NM_001195811 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr19-3412 chr19 17255475 17255685 + 10.4 0.000 non-coding (NR_135632, exon 11 of 14) non-coding (NR_135632, exon 11 of 14) 9165 NR_135632 83878 Hs.512773 NM_031941 ENSG00000130307 USHBP1 AIEBP|MCC2 USH1 protein network component harmonin binding protein 1 protein-coding chr4-8194 chr4 134042137 134042347 + 10.4 0.000 Intergenic L1PB3|LINE|L1 159547 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr1-10059 chr1 92398706 92398916 + 10.4 0.000 3' UTR (NM_024813, exon 13 of 13) 3' UTR (NM_024813, exon 13 of 13) 85143 NM_001127215 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr6-628 chr6 41779844 41780054 + 10.4 0.000 promoter-TSS (NM_013397) promoter-TSS (NM_013397) -49 NM_006653 10817 Hs.194208 NM_006653 ENSG00000137218 FRS3 FRS2-beta|FRS2B|FRS2beta|SNT-2|SNT2 fibroblast growth factor receptor substrate 3 protein-coding chr19-6036 chr19 2086826 2087036 + 10.4 0.000 intron (NM_130807, intron 1 of 4) AluJo|SINE|Alu 9395 NM_130807 126308 Hs.744938 NM_130807 ENSG00000172081 MOB3A MOB-LAK|MOB1C|MOBKL2A|moblak MOB kinase activator 3A protein-coding chr2-7766 chr2 39670407 39670617 + 10.4 0.000 intron (NM_152390, intron 1 of 3) intron (NM_152390, intron 1 of 3) 4595 NM_152390 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr22-1267 chr22 28712518 28712728 + 10.4 0.000 intron (NM_001349956, intron 4 of 13) intron (NM_001349956, intron 4 of 13) 29197 NM_001005735 11200 Hs.291363 NM_007194 ENSG00000183765 CHEK2 CDS1|CHK2|HuCds1|LFS2|PP1425|RAD53|hCds1 checkpoint kinase 2 protein-coding chr2-8068 chr2 73366563 73366773 + 10.4 0.000 Intergenic ERVL-E-int|LTR|ERVL -19090 NM_015120 7840 Hs.184720 NM_015120 ENSG00000116127 ALMS1 ALSS ALMS1 centrosome and basal body associated protein protein-coding chr8-2728 chr8 101459728 101459938 + 10.4 0.000 Intergenic Intergenic -32606 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr2-13473 chr2 146906077 146906287 + 10.4 0.000 Intergenic MIRc|SINE|MIR 319125 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr9-5189 chr9 71514649 71514859 + 10.4 0.000 Intergenic Intergenic -67783 NM_001366144 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr3-10898 chr3 171175958 171176168 + 10.4 0.000 intron (NM_001161563, intron 8 of 31) intron (NM_001161563, intron 8 of 31) -69304 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr20-3600 chr20 4879445 4879655 + 10.4 0.000 intron (NM_005116, intron 9 of 16) intron (NM_005116, intron 9 of 16) -55942 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr4-7730 chr4 90485550 90485760 + 10.4 0.000 intron (NM_207491, intron 5 of 7) L1PA13|LINE|L1 250624 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr20-1143 chr20 44896570 44896780 + 10.4 0.000 intron (NM_003404, intron 2 of 6) intron (NM_003404, intron 2 of 6) 10970 NM_003404 7529 Hs.643544 NM_003404 ENSG00000166913 YWHAB GW128|HEL-S-1|HS1|KCIP-1|YWHAA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta protein-coding chr19-4787 chr19 33725350 33725560 + 10.4 0.000 intron (NM_001127895, intron 3 of 4) intron (NM_001127895, intron 3 of 4) 40927 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr20-688 chr20 63848323 63848533 + 10.4 0.000 Intergenic Intergenic -12785 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr3-1928 chr3 187986609 187986819 + 10.4 0.000 Intergenic Intergenic -10307 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr12-4295 chr12 124057739 124057949 + 10.4 0.000 intron (NM_001347902, intron 2 of 4) MLT1B|LTR|ERVL-MaLR 84629 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr5-4032 chr5 37211751 37211961 + 10.4 0.000 intron (NM_023073, intron 16 of 51) intron (NM_023073, intron 16 of 51) -37190 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chr11-6704 chr11 78613003 78613213 + 10.4 0.000 Intergenic ERVL-B4-int|LTR|ERVL -38244 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr7-1737 chr7 26152026 26152236 + 10.4 0.000 promoter-TSS (NM_004289) promoter-TSS (NM_004289) -67 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr6-6838 chr6 7722894 7723104 + 10.4 0.000 Intergenic Intergenic -3100 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr3-8713 chr3 189981766 189981976 + 10.4 0.000 intron (NM_018192, intron 8 of 14) intron (NM_018192, intron 8 of 14) 139026 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr6-4525 chr6 38771189 38771399 + 10.4 0.000 intron (NM_001371, intron 11 of 91) intron (NM_001371, intron 11 of 91) 55983 NM_001371 1769 Hs.520106 NM_001371 ENSG00000124721 DNAH8 ATPase|hdhc9 dynein axonemal heavy chain 8 protein-coding chr16-4559 chr16 66710199 66710409 + 10.4 0.000 Intergenic AluSx1|SINE|Alu -13561 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr9-7407 chr9 20912112 20912322 + 10.4 0.000 intron (NM_017794, intron 24 of 45) intron (NM_017794, intron 24 of 45) 119423 NM_001010915 401494 Hs.716678 NM_001010915 ENSG00000188921 HACD4 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 protein-coding chr4-7425 chr4 66629976 66630186 + 10.4 0.000 Intergenic Intergenic 353257 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr6-4396 chr6 25881126 25881336 + 10.4 0.000 Intergenic LTR82A|LTR|ERVL -6988 NM_006632 10786 Hs.327179 NM_006632 ENSG00000124564 SLC17A3 GOUT4|NPT4|UAQTL4 solute carrier family 17 member 3 protein-coding chr7-4319 chr7 33952935 33953145 + 10.4 0.000 intron (NM_133468, intron 4 of 15) intron (NM_133468, intron 4 of 15) 47501 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr10-3031 chr10 114753259 114753469 + 10.4 0.000 intron (NM_001322886, intron 1 of 20) LTR104_Mam|LTR|Gypsy -11424 NR_120628 101927692 Hs.576909 NR_120628 ENSG00000228484 LOC101927692 - uncharacterized LOC101927692 ncRNA chr19-2252 chr19 50922219 50922429 + 10.4 0.000 Intergenic MIR|SINE|MIR -11586 NM_001302961 9622 Hs.218366 NM_004917 ENSG00000167749 KLK4 AI2A1|ARM1|EMSP|EMSP1|KLK-L1|PRSS17|PSTS|kallikrein kallikrein related peptidase 4 protein-coding chr1-7003 chr1 168979626 168979836 + 10.4 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 107274 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr3-10661 chr3 149757681 149757891 + 10.4 0.000 Intergenic HERV17-int|LTR|ERV1 -5287 NR_135149 51122 Hs.432729 NM_016094 ENSG00000114744 COMMD2 HSPC042 COMM domain containing 2 protein-coding chr16-2826 chr16 73044030 73044240 + 10.4 0.000 intron (NM_006885, intron 1 of 9) intron (NM_006885, intron 1 of 9) 3993 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr22-2696 chr22 37468884 37469094 + 10.4 0.000 TTS (NM_002405) TTS (NM_002405) 17395 NM_002405 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr3-5739 chr3 19109291 19109501 + 10.4 0.000 Intergenic Intergenic -39114 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr17-5254 chr17 18069013 18069223 + 10.4 0.000 TTS (NM_024052) TTS (NM_024052) -18830 NM_001330144 1819 Hs.78582 NM_001388 ENSG00000108591 DRG2 - developmentally regulated GTP binding protein 2 protein-coding chrX-1437 chrX 56947945 56948155 + 10.4 0.000 Intergenic HERVK11-int|LTR|ERVK 47491 NR_027139 169981 Hs.522672 NM_001010862 ENSG00000204271 SPIN3 SPIN-3|TDRD27|bA445O16.1 spindlin family member 3 protein-coding chr7-5298 chr7 24784861 24785071 + 10.4 0.000 Intergenic MLT2B3|LTR|ERVL -27027 NM_004403 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr10-2670 chr10 98019460 98019670 + 10.4 0.000 intron (NM_001206528, intron 1 of 14) intron (NM_001206528, intron 1 of 14) 11056 NM_018058 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr13-2447 chr13 48949957 48950167 + 10.4 0.000 Intergenic Intergenic -25850 NM_001079673 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr12-3993 chr12 23193381 23193591 + 10.4 0.000 Intergenic L2c|LINE|L2 17850 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr13-1929 chr13 78796307 78796517 + 10.4 0.000 intron (NR_046869, intron 2 of 4) Plat_L3|LINE|CR1 43638 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr8-2031 chr8 104418057 104418267 + 10.4 0.000 intron (NM_001385, intron 7 of 9) intron (NM_001385, intron 7 of 9) 48893 NM_001385 1807 Hs.443161 NM_001385 ENSG00000147647 DPYS DHP|DHPase dihydropyrimidinase protein-coding chr22-1403 chr22 39540138 39540348 + 10.4 0.000 Intergenic Intergenic -7495 NR_130151 91582 Hs.526933 NM_194326 ENSG00000187051 RPS19BP1 AROS|S19BP ribosomal protein S19 binding protein 1 protein-coding chr7-2593 chr7 134915042 134915252 + 10.4 0.000 intron (NM_033139, intron 1 of 12) intron (NM_033139, intron 1 of 12) 23689 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr12-5515 chr12 131379168 131379378 + 10.4 0.000 Intergenic Intergenic 31803 NR_103736 338797 Hs.592007 NM_001025466 LINC02370 - long intergenic non-protein coding RNA 2370 ncRNA chr2-3152 chr2 191441695 191441905 + 10.4 0.000 Intergenic Intergenic 196396 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr7-8634 chr7 70233958 70234168 + 10.4 0.000 intron (NM_015570, intron 4 of 18) intron (NM_015570, intron 4 of 18) 635588 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr12-3809 chr12 67068322 67068532 + 10.4 0.000 Intergenic Intergenic 27857 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr19-3242 chr19 1424729 1424939 + 10.4 0.000 intron (NM_001352035, intron 6 of 10) CpG -13530 NM_001018 6209 Hs.406683 NM_001018 ENSG00000115268 RPS15 RIG|S15 ribosomal protein S15 protein-coding chr8-7174 chr8 123692206 123692416 + 10.4 0.000 intron (NM_001003954, intron 9 of 11) MIRc|SINE|MIR -38510 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr13-2695 chr13 90526593 90526803 + 10.4 0.000 intron (NR_120414, intron 3 of 5) intron (NR_120414, intron 3 of 5) 33410 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr5-8386 chr5 124310733 124310943 + 10.4 0.000 intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 127682 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr1-3875 chr1 50841998 50842208 + 10.4 0.000 intron (NM_007051, intron 2 of 18) intron (NM_007051, intron 2 of 18) 118164 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr5-4464 chr5 7121950 7122160 + 10.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 147299 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr1-4815 chr1 21832458 21832668 + 10.4 0.000 exon (NM_001291860, exon 81 of 97) exon (NM_001291860, exon 81 of 97) 20298 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr6-4701 chr6 56370065 56370275 + 10.4 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) 23958 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr6-4729 chr6 64597253 64597463 + 10.4 0.000 intron (NM_001292009, intron 24 of 43) L1PB4|LINE|L1 -704060 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr9-5867 chr9 131041540 131041750 + 10.4 0.000 exon (NM_006059, exon 7 of 28) exon (NM_006059, exon 7 of 28) 32471 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr1-7275 chr1 235090274 235090484 + 10.4 0.000 Intergenic Intergenic -20561 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA chr4-4496 chr4 59393296 59393506 + 10.4 0.000 Intergenic L1P3|LINE|L1 379828 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr3-2836 chr3 21754752 21754962 + 10.4 0.000 Intergenic L2a|LINE|L2 -3647 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr5-3426 chr5 150642739 150642949 + 10.4 0.000 intron (NM_001109974, intron 1 of 1) intron (NM_001109974, intron 1 of 1) 2184 NM_001109974 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr9-3767 chr9 125161270 125161480 + 10.4 0.000 intron (NM_002721, intron 2 of 6) intron (NM_002721, intron 2 of 6) -17847 NM_173690 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr15-3652 chr15 90141355 90141565 + 10.4 0.000 Intergenic LTR56|LTR|ERV1 -38906 NM_002168 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chrX-3875 chrX 4318345 4318555 + 10.4 0.000 Intergenic Intergenic 315122 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr11-3417 chr11 17731090 17731300 + 10.4 0.000 Intergenic Intergenic -4753 NM_001112741 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr2-14477 chr2 224938765 224938975 + 10.4 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) 8179 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr9-2033 chr9 137064221 137064431 + 10.4 0.000 3' UTR (NM_178448, exon 6 of 6) 3' UTR (NM_178448, exon 6 of 6) 6231 NM_178448 89958 Hs.19322 NM_178448 ENSG00000186193 SAPCD2 C9orf140|p42.3 suppressor APC domain containing 2 protein-coding chr17-7075 chr17 66165700 66165910 + 10.4 0.000 intron (NM_001353129, intron 4 of 26) intron (NM_001353129, intron 4 of 26) 26087 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr2-6357 chr2 100343711 100343921 + 10.4 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -21083 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr12-3514 chr12 126997804 126998014 + 10.4 0.000 intron (NR_104646, intron 3 of 6) MLT2A2|LTR|ERVL 62488 NR_104646 101927592 Hs.385663 NR_104646 ENSG00000249345 LINC02405 - long intergenic non-protein coding RNA 2405 ncRNA chr5-6730 chr5 74149502 74149712 + 10.3 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 158718 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr7-8121 chr7 26885640 26885850 + 10.3 0.000 Intergenic L1M1|LINE|L1 -21155 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr1-9072 chr1 15435008 15435218 + 10.3 0.000 Intergenic Intergenic -3330 NM_007272 11330 Hs.631869 NM_007272 ENSG00000162438 CTRC CLCR|ELA4 chymotrypsin C protein-coding chr7-2149 chr7 44735579 44735789 + 10.3 0.000 Intergenic L1MB8|LINE|L1 -12882 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr1-14703 chr1 64006600 64006810 + 10.3 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 105500 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr13-1724 chr13 98382557 98382767 + 10.3 0.000 intron (NM_005766, intron 6 of 26) Tigger17a|DNA|TcMar-Tigger 139463 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr3-3343 chr3 13550096 13550306 + 10.3 0.000 intron (NM_001004019, intron 1 of 17) intron (NM_001004019, intron 1 of 17) 1076 NM_001004019 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr6-2173 chr6 27792240 27792450 + 10.3 0.000 Intergenic Intergenic 15586 NM_003519 8340 Hs.137594 NM_003519 ENSG00000185130 HIST1H2BL H2B/c|H2BFC|dJ97D16.4 histone cluster 1 H2B family member l protein-coding chr22-2563 chr22 27364394 27364604 + 10.3 0.000 Intergenic L1MC1|LINE|L1 53848 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr3-3091 chr3 136938325 136938535 + 10.3 0.000 intron (NM_001190796, intron 1 of 2) Tigger17a|DNA|TcMar-Tigger 7928 NM_001190796 4690 Hs.126889 NM_006153 ENSG00000158092 NCK1 NCK|NCKalpha|nck-1 NCK adaptor protein 1 protein-coding chr14-2281 chr14 51008625 51008835 + 10.3 0.000 intron (NM_015163, intron 5 of 9) intron (NM_015163, intron 5 of 9) -64247 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr12-2125 chr12 83122672 83122882 + 10.3 0.000 intron (NM_152588, intron 11 of 11) L1PB1|LINE|L1 435622 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr1-4092 chr1 226353072 226353282 + 10.3 0.000 Intergenic LTR78|LTR|ERV1 -43410 NM_001270410 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr5-3056 chr5 31449151 31449361 + 10.3 0.000 intron (NM_013235, intron 21 of 34) intron (NM_013235, intron 21 of 34) 82837 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chrX-1782 chrX 77003451 77003661 + 10.3 0.000 intron (NR_110403, intron 1 of 3) intron (NR_110403, intron 1 of 3) 1945 NR_029905 442899 NR_029905 ENSG00000207995 MIR325 MIRN325|hsa-mir-325 microRNA 325 ncRNA chr1-6881 chr1 117368065 117368275 + 10.3 0.000 5' UTR (NM_006699, exon 1 of 13) 5' UTR (NM_006699, exon 1 of 13) 721 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr8-3182 chr8 102855977 102856187 + 10.3 0.000 intron (NM_001363083, intron 2 of 12) MER46C|DNA|TcMar-Tigger 8081 NM_001301668 51582 Hs.459106 NM_015878 ENSG00000155096 AZIN1 AZI|AZI1|AZIA1|OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding chr16-5249 chr16 48465581 48465791 + 10.3 0.000 Intergenic L1P1|LINE|L1 -80273 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chrX-3788 chrX 134880843 134881053 + 10.3 0.000 Intergenic Intergenic 34309 NM_019556 56180 Hs.590789 NM_019556 ENSG00000101928 MOSPD1 DJ473B4 motile sperm domain containing 1 protein-coding chr1-6860 chr1 110067420 110067630 + 10.3 0.000 intron (NM_006492, intron 1 of 3) intron (NM_006492, intron 1 of 3) 3147 NM_006492 257 Hs.669953 NM_006492 ENSG00000156150 ALX3 FND|FND1 ALX homeobox 3 protein-coding chr16-1103 chr16 87590131 87590341 + 10.3 0.000 Intergenic Intergenic -11599 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr4-2279 chr4 187373531 187373741 + 10.3 0.000 intron (NR_038931, intron 1 of 4) intron (NR_038931, intron 1 of 4) 2988 NR_149103 105377602 Hs.582096 NR_149103 ENSG00000250042 LINC02514 - long intergenic non-protein coding RNA 2514 ncRNA chr2-8874 chr2 176872343 176872553 + 10.3 0.000 Intergenic L1MCb|LINE|L1 234694 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr22-1658 chr22 39316291 39316501 + 10.3 0.000 TTS (NR_000026) TTS (NR_000026) 500 NR_000026 116936 NR_000026 SNORD139 RNU86|U82|U86 small nucleolar RNA, C/D box 139 snoRNA chr9-3086 chr9 21396088 21396298 + 10.3 0.000 Intergenic CpG -10795 NM_000605 3440 Hs.211575 NM_000605 ENSG00000188379 IFNA2 IFN-alphaA|IFNA|IFNA2B|INFA2 interferon alpha 2 protein-coding chr1-16361 chr1 220341174 220341384 + 10.3 0.000 Intergenic Intergenic -68826 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr14-1241 chr14 103910441 103910651 + 10.3 0.000 Intergenic Intergenic 10983 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr9-2481 chr9 74742925 74743135 + 10.3 0.000 intron (NM_017662, intron 32 of 38) intron (NM_017662, intron 32 of 38) 127496 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr9-2782 chr9 112558583 112558793 + 10.3 0.000 intron (NM_133465, intron 1 of 3) intron (NM_133465, intron 1 of 3) -71044 NM_001350649 100133204 Hs.662552 NM_001350649 C9orf147 - chromosome 9 open reading frame 147 protein-coding chr11-10563 chr11 121870698 121870908 + 10.3 0.000 Intergenic Intergenic 229041 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr7-2325 chr7 122137654 122137864 + 10.3 0.000 intron (NM_005763, intron 1 of 23) intron (NM_005763, intron 1 of 23) 6490 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr14-4574 chr14 48865193 48865403 + 10.3 0.000 Intergenic MIRb|SINE|MIR 721082 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr9-3619 chr9 88476205 88476415 + 10.3 0.000 3' UTR (NM_006717, exon 6 of 6) 3' UTR (NM_006717, exon 6 of 6) -58791 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr9-3657 chr9 95147621 95147831 + 10.3 0.000 intron (NM_001243744, intron 7 of 13) Charlie1|DNA|hAT-Charlie -61632 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr7-2802 chr7 88323185 88323395 + 10.3 0.000 Intergenic Intergenic -16396 NM_024636 79689 Hs.521008 NM_024636 ENSG00000127954 STEAP4 STAMP2|SchLAH|TIARP|TNFAIP9 STEAP4 metalloreductase protein-coding chr16-1497 chr16 8686158 8686368 + 10.3 0.000 intron (NM_020686, intron 1 of 15) intron (NM_020686, intron 1 of 15) 11646 NM_020686 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr3-5357 chr3 141653535 141653745 + 10.3 0.000 Intergenic Intergenic -9559 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr22-2709 chr22 37941824 37942034 + 10.3 0.000 3' UTR (NM_033386, exon 16 of 16) 3' UTR (NM_033386, exon 16 of 16) 11672 NM_032561 84645 Hs.517612 NM_032561 ENSG00000128346 C22orf23 EVG1|dJ1039K5.6 chromosome 22 open reading frame 23 protein-coding chr15-1974 chr15 40637495 40637705 + 10.3 0.000 intron (NM_144508, intron 13 of 25) Tigger4|DNA|TcMar-Tigger 43351 NM_144508 57082 Hs.181855 NM_144508 ENSG00000137812 KNL1 AF15Q14|CASC5|CT29|D40|MCPH4|PPP1R55|Spc7|hKNL-1|hSpc105 kinetochore scaffold 1 protein-coding chrX-1882 chrX 130415694 130415904 + 10.3 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 13812 NM_016024 51634 Hs.740515 NM_016024 ENSG00000134597 RBMX2 CGI-79|Snu17 RNA binding motif protein X-linked 2 protein-coding chr17-4460 chr17 56047588 56047798 + 10.3 0.000 Intergenic Intergenic -105782 NM_001370326 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr18-3472 chr18 70333671 70333881 + 10.3 0.000 Intergenic Intergenic -1663 NR_126336 101927481 Hs.633706 NR_126336 ENSG00000266258 LINC01909 - long intergenic non-protein coding RNA 1909 ncRNA chr18-1166 chr18 13107456 13107666 + 10.3 0.000 intron (NM_032142, intron 40 of 44) intron (NM_032142, intron 40 of 44) -111199 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr2-3830 chr2 27233461 27233671 + 10.3 0.000 intron (NM_001306079, intron 19 of 42) intron (NM_001306079, intron 19 of 42) 16176 NM_001306079 790 Hs.377010 NM_004341 ENSG00000084774 CAD CDG1Z|EIEE50|GATD4 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase protein-coding chr12-4155 chr12 84079622 84079832 + 10.3 0.000 Intergenic Intergenic 833072 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr2-6454 chr2 158716835 158717045 + 10.3 0.000 intron (NR_135242, intron 1 of 3) intron (NR_135242, intron 1 of 3) 18062 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr10-1785 chr10 78457637 78457847 + 10.3 0.000 Intergenic Intergenic 190400 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr2-11076 chr2 121857694 121857904 + 10.3 0.000 Intergenic Intergenic 102148 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr14-549 chr14 76393823 76394033 + 10.3 0.000 intron (NM_004452, intron 1 of 10) AluSx|SINE|Alu 22581 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr20-2553 chr20 36273620 36273830 + 10.3 0.000 Intergenic Intergenic -32614 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr5-6764 chr5 83475546 83475756 + 10.3 0.000 intron (NM_001164098, intron 1 of 13) intron (NM_001164098, intron 1 of 13) 3907 NM_004385 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr12-7560 chr12 72574334 72574544 + 10.3 0.000 intron (NM_013381, intron 10 of 18) intron (NM_013381, intron 10 of 18) -300930 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr15-1606 chr15 80404783 80404993 + 10.3 0.000 intron (NM_014862, intron 1 of 18) CpG 506 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr2-11458 chr2 229050312 229050522 + 10.3 0.000 intron (NM_001330157, intron 1 of 1) intron (NM_001330157, intron 1 of 1) 181675 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr12-1690 chr12 114704286 114704496 + 10.3 0.000 Intergenic Intergenic -20216 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr1-6919 chr1 150988642 150988852 + 10.3 0.000 intron (NM_003568, intron 12 of 13) MIRb|SINE|MIR 6455 NM_003568 8416 Hs.3346 NM_003568 ENSG00000143412 ANXA9 ANX31 annexin A9 protein-coding chr7-7410 chr7 74033815 74034025 + 10.3 0.000 intron (NM_001278915, intron 1 of 32) intron (NM_001278915, intron 1 of 32) 5747 NM_001278916 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr5-3819 chr5 97298006 97298216 + 10.3 0.000 Intergenic L1MA3|LINE|L1 -114864 NM_018343 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding chr13-877 chr13 30908403 30908613 + 10.3 0.000 intron (NM_032849, intron 1 of 4) intron (NM_032849, intron 1 of 4) 2237 NM_032849 84935 Hs.147880 NM_032849 ENSG00000102802 MEDAG AWMS3|C13orf33|MEDA-4|MEDA4|hAWMS3 mesenteric estrogen dependent adipogenesis protein-coding chr20-1982 chr20 45492502 45492712 + 10.3 0.000 Intergenic L2a|LINE|L2 22854 NM_006103 10406 Hs.2719 NM_006103 ENSG00000101443 WFDC2 EDDM4|HE4|WAP5|dJ461P17.6 WAP four-disulfide core domain 2 protein-coding chr5-4695 chr5 39561572 39561782 + 10.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 41246 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr11-6164 chr11 44325142 44325352 + 10.3 0.000 Intergenic Intergenic -15108 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr1-6136 chr1 164589262 164589472 + 10.3 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 29645 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr6-2798 chr6 148935116 148935326 + 10.3 0.000 intron (NM_005715, intron 2 of 7) intron (NM_005715, intron 2 of 7) 29463 NR_038408 100128176 Hs.557541 NR_038408 UST-AS1 - UST antisense RNA 1 ncRNA chr12-1754 chr12 69070341 69070551 + 10.3 0.000 Intergenic Intergenic -107206 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr2-2780 chr2 241064441 241064651 + 10.3 0.000 intron (NM_001080437, intron 19 of 31) intron (NM_001080437, intron 19 of 31) 37741 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr5-6878 chr5 126002032 126002242 + 10.3 0.000 Intergenic Intergenic -177440 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr2-8170 chr2 85918245 85918455 + 10.3 0.000 Intergenic Intergenic 29070 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr1-10348 chr1 154282687 154282897 + 10.3 0.000 Intergenic L1MA6|LINE|L1 10163 NM_001018837 10456 Hs.199625 NM_006118 ENSG00000143575 HAX1 HCLSBP1|HS1BP1|SCN3 HCLS1 associated protein X-1 protein-coding chr7-5303 chr7 24921443 24921653 + 10.3 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) -28927 NR_104111 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr8-6414 chr8 57795396 57795606 + 10.3 0.000 Intergenic Intergenic 49352 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr11-9487 chr11 62326138 62326348 + 10.3 0.000 Intergenic LTR2B|LTR|ERV1 -11205 NM_025080 80150 Hs.535326 NM_025080 ENSG00000162174 ASRGL1 ALP|ALP1|CRASH asparaginase like 1 protein-coding chr9-2736 chr9 95017767 95017977 + 10.3 0.000 intron (NM_032823, intron 11 of 14) L1ME1|LINE|L1 -47478 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr1-4094 chr1 228131233 228131443 + 10.3 0.000 Intergenic ERV24_Prim-int|LTR|ERV1 -8746 NM_001242839 2987 Hs.376933 NM_000858 ENSG00000143774 GUK1 GMK guanylate kinase 1 protein-coding chr6-5248 chr6 136624085 136624295 + 10.3 0.000 intron (NM_005923, intron 14 of 29) AluSx|SINE|Alu -4924 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr5-8951 chr5 159617027 159617237 + 10.3 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -150856 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr20-769 chr20 43663404 43663614 + 10.3 0.000 Intergenic Intergenic -3510 NM_001278610 4605 Hs.179718 NM_002466 ENSG00000101057 MYBL2 B-MYB|BMYB MYB proto-oncogene like 2 protein-coding chr16-4319 chr16 29898782 29898992 + 10.3 0.000 intron (NM_001243332, intron 1 of 17) intron (NM_001243332, intron 1 of 17) 377 NM_001243332 26470 Hs.6314 NM_012410 ENSG00000174938 SEZ6L2 BSRPA|PSK-1 seizure related 6 homolog like 2 protein-coding chr1-11037 chr1 223143093 223143303 + 10.3 0.000 promoter-TSS (NM_003268) promoter-TSS (NM_003268) 50 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr18-1404 chr18 79954489 79954699 + 10.3 0.000 Intergenic Intergenic -2941 NM_001146343 80148 Hs.288284 NM_025078 ENSG00000122490 SLC66A2 PQLC1 solute carrier family 66 member 2 protein-coding chr6-7175 chr6 37806636 37806846 + 10.3 0.000 Intergenic AluJo|SINE|Alu -12986 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr14-4066 chr14 60965005 60965215 + 10.3 0.000 intron (NM_001177963, intron 6 of 6) intron (NM_001177963, intron 6 of 6) 15969 NM_020810 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr19-1762 chr19 9854556 9854766 + 10.3 0.000 exon (NM_001304347, exon 6 of 6) exon (NM_001304347, exon 6 of 6) 3514 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr17-8311 chr17 71338314 71338524 + 10.3 0.000 Intergenic Intergenic -136240 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr3-6947 chr3 161222786 161222996 + 10.3 0.000 intron (NM_015938, intron 2 of 15) intron (NM_015938, intron 2 of 15) 1601 NM_001320227 51068 Hs.598836 NM_015938 ENSG00000169251 NMD3 CGI-07 NMD3 ribosome export adaptor protein-coding chr2-2011 chr2 73212597 73212807 + 10.3 0.000 TTS (NM_001134462) TTS (NM_001134462) -1543 NM_006062 10322 Hs.631882 NM_006062 ENSG00000135632 SMYD5 NN8-4AG|RAI15|RRG1|ZMYND23 SMYD family member 5 protein-coding chr1-5187 chr1 173062226 173062436 + 10.3 0.000 Intergenic Intergenic -11368 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr20-720 chr20 62772913 62773123 + 10.3 0.000 Intergenic Intergenic 3838 NR_046224 100652730 Hs.254951 NR_046224 LINC00659 - long intergenic non-protein coding RNA 659 ncRNA chr2-8322 chr2 107230284 107230494 + 10.3 0.000 intron (NR_049853, intron 2 of 3) L1PB2|LINE|L1 119136 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr10-3095 chr10 18452744 18452954 + 10.3 0.000 intron (NM_201593, intron 3 of 13) intron (NM_201593, intron 3 of 13) 52274 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr5-6789 chr5 93126772 93126982 + 10.3 0.000 Intergenic Intergenic 444466 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr9-2667 chr9 37430848 37431058 + 10.3 0.000 intron (NM_012203, intron 7 of 8) intron (NM_012203, intron 7 of 8) 8257 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr9-5909 chr9 132833459 132833669 + 10.3 0.000 intron (NM_001317959, intron 6 of 14) intron (NM_001317959, intron 6 of 14) -44780 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr19-4700 chr19 18669458 18669668 + 10.3 0.000 3' UTR (NM_001345984, exon 4 of 4) 3' UTR (NM_001345984, exon 4 of 4) -14117 NM_001098482 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr2-7034 chr2 154168139 154168349 + 10.3 0.000 intron (NM_052917, intron 4 of 12) MLT2D|LTR|ERVL 223850 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr3-6434 chr3 102429744 102429954 + 10.3 0.000 Intergenic Intergenic -5166 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr6-2368 chr6 135922226 135922436 + 10.3 0.000 intron (NM_018945, intron 1 of 12) Tigger19b|DNA|TcMar-Tigger 70630 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr10-3497 chr10 69646379 69646589 + 10.3 0.000 Intergenic Intergenic 16237 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr12-2231 chr12 57009022 57009232 + 10.3 0.000 TTS (NR_033654) TTS (NR_033654) -2581 NM_014830 9880 Hs.591025 NM_014830 ENSG00000166860 ZBTB39 ZNF922 zinc finger and BTB domain containing 39 protein-coding chr10-2569 chr10 70418381 70418591 + 10.3 0.000 intron (NM_004096, intron 1 of 2) intron (NM_004096, intron 1 of 2) 14341 NM_004096 1979 Hs.621200 NM_004096 ENSG00000148730 EIF4EBP2 4EBP2|PHASII eukaryotic translation initiation factor 4E binding protein 2 protein-coding chr4-2128 chr4 74805739 74805949 + 10.3 0.000 Intergenic Intergenic -11321 NM_001316963 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding KI270508.1-1 KI270508.1 219 429 + 10.3 0.000 NA NA NA NA chr6-1001 chr6 18122560 18122770 + 10.3 0.000 promoter-TSS (NM_198586) promoter-TSS (NM_198586) 12 NM_198586 378884 Hs.348351 NM_198586 ENSG00000187566 NHLRC1 EPM2A|EPM2B|MALIN|bA204B7.2 NHL repeat containing E3 ubiquitin protein ligase 1 protein-coding chr7-5142 chr7 5488311 5488521 + 10.3 0.000 TTS (NM_001321213) TTS (NM_001321213) 7501 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr5-6004 chr5 141589951 141590161 + 10.3 0.000 intron (NM_005219, intron 1 of 27) intron (NM_005219, intron 1 of 27) 28944 NM_001314007 1729 Hs.529451 NM_005219 ENSG00000131504 DIAPH1 DFNA1|DIA1|DRF1|LFHL1|SCBMS|hDIA1 diaphanous related formin 1 protein-coding chr16-6812 chr16 80535137 80535347 + 10.3 0.000 intron (NR_120307, intron 1 of 5) L1MEf|LINE|L1 -5492 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr2-4287 chr2 232591903 232592113 + 10.3 0.000 Intergenic MLT2B2|LTR|ERVL -14049 NM_001243252 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr2-14110 chr2 200951479 200951689 + 10.3 0.000 intron (NR_033915, intron 4 of 16) L1MC1|LINE|L1 12076 NM_006190 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr16-1678 chr16 87240500 87240710 + 10.3 0.000 Intergenic Intergenic 28490 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr9-4992 chr9 21455415 21455625 + 10.3 0.000 non-coding (NR_027054, exon 4 of 4) non-coding (NR_027054, exon 4 of 4) 15081 NM_024013 3439 Hs.37026 NM_024013 ENSG00000197919 IFNA1 IFL|IFN|IFN-ALPHA|IFN-alphaD|IFNA13|IFNA@ interferon alpha 1 protein-coding chr18-306 chr18 45626477 45626687 + 10.3 0.000 intron (NM_007163, intron 3 of 19) intron (NM_007163, intron 3 of 19) 11106 NM_007163 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr2-8940 chr2 186558521 186558731 + 10.3 0.000 Intergenic Intergenic -31430 NM_001145000 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr10-2338 chr10 69861636 69861846 + 10.3 0.000 intron (NM_001368898, intron 3 of 33) MER117|DNA|hAT-Charlie 59835 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr5-6724 chr5 72571803 72572013 + 10.3 0.000 TTS (NR_105008) TTS (NR_105008) 14831 NR_105008 102503427 Hs.429280 NR_105008 LOC102503427 - uncharacterized LOC102503427 ncRNA chr8-5830 chr8 5396141 5396351 + 10.3 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -401332 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr1-6111 chr1 154275351 154275561 + 10.3 0.000 exon (NM_001018837, exon 6 of 7) exon (NM_001018837, exon 6 of 7) 2827 NM_001018837 10456 Hs.199625 NM_006118 ENSG00000143575 HAX1 HCLSBP1|HS1BP1|SCN3 HCLS1 associated protein X-1 protein-coding chr11-3703 chr11 6992920 6993130 + 10.3 0.000 Intergenic MER41D|LTR|ERV1 27321 NM_001354830 7761 Hs.445849 NM_013249 ENSG00000149050 ZNF214 BAZ-1|BAZ1 zinc finger protein 214 protein-coding chr3-5409 chr3 161078629 161078839 + 10.3 0.000 non-coding (NR_134243, exon 6 of 6) non-coding (NR_134243, exon 6 of 6) 25998 NM_001349161 8706 Hs.418062 NM_003781 ENSG00000169255 B3GALNT1 B3GALT3|GLCT3|GLOB|Gb4Cer|P|P1|beta3Gal-T3|galT3 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) protein-coding chr17-3117 chr17 27812594 27812804 + 10.3 0.000 Intergenic Intergenic -12170 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chrX-1378 chrX 153477950 153478160 + 10.3 0.000 intron (NR_073156, intron 1 of 12) intron (NR_073156, intron 1 of 12) -7424 NM_017518 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr20-4489 chr20 63011975 63012185 + 10.3 0.000 intron (NR_033370, intron 1 of 4) PRIMA41-int|LTR|ERV1 2697 NR_033370 63930 Hs.640084 NR_033370 ENSG00000272259 LINC01749 - long intergenic non-protein coding RNA 1749 ncRNA chr2-7363 chr2 1961589 1961799 + 10.3 0.000 intron (NM_015025, intron 8 of 24) intron (NM_015025, intron 8 of 24) -217179 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr7-2577 chr7 128155105 128155315 + 10.3 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -52662 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr2-2577 chr2 231397199 231397409 + 10.3 0.000 intron (NM_145236, intron 1 of 1) intron (NM_145236, intron 1 of 1) 1594 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr7-4648 chr7 31189146 31189356 + 10.3 0.000 Intergenic (CTTTCTT)n|Simple_repeat|Simple_repeat 136790 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr4-6428 chr4 132594090 132594300 + 10.3 0.000 intron (NR_126401, intron 1 of 3) MER49|LTR|ERV1 3106 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr9-5691 chr9 124238838 124239048 + 10.3 0.000 Intergenic L1MB4|LINE|L1 -18663 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr10-3654 chr10 100290403 100290613 + 10.3 0.000 exon (NM_001253837, exon 13 of 16) exon (NM_001253837, exon 13 of 16) -3796 NM_001282436 282991 Hs.34906 NM_173809 ENSG00000196072 BLOC1S2 BLOS2|BORCS2|CEAP|CEAP11 biogenesis of lysosomal organelles complex 1 subunit 2 protein-coding chr3-5335 chr3 133077524 133077734 + 10.3 0.000 intron (NM_001136469, intron 2 of 5) intron (NM_001136469, intron 2 of 5) 39341 NM_001136469 66000 Hs.191616 NM_023943 ENSG00000144868 TMEM108 CT124|RTLN transmembrane protein 108 protein-coding chr2-6203 chr2 20365462 20365672 + 10.3 0.000 Intergenic L2a|LINE|L2 -13314 NM_001352925 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr4-6951 chr4 18615213 18615423 + 10.3 0.000 Intergenic LTR86B1|LTR|ERVL -593443 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr1-6224 chr1 218377319 218377529 + 10.3 0.000 intron (NR_138149, intron 2 of 7) intron (NR_138149, intron 2 of 7) -31746 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA chr6-4702 chr6 56649370 56649580 + 10.3 0.000 intron (NM_001144770, intron 9 of 94) L2c|LINE|L2 -6586 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr12-1644 chr12 6320901 6321111 + 10.3 0.000 intron (NM_001144857, intron 12 of 14) intron (NM_001144857, intron 12 of 14) 8355 NM_001144857 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr11-7355 chr11 67329503 67329713 + 10.3 0.000 intron (NR_024469, intron 2 of 3) AluSz6|SINE|Alu 11769 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 - uncharacterized LOC100130987 ncRNA chr8-3183 chr8 103124923 103125133 + 10.3 0.000 intron (NR_145429, intron 1 of 5) intron (NR_145429, intron 1 of 5) 3996 NR_145429 379034 Hs.591862 NR_145429 LINC01181 - long intergenic non-protein coding RNA 1181 ncRNA chr2-7327 chr2 240935342 240935552 + 10.3 0.000 exon (NM_001351305, exon 14 of 32) exon (NM_001351305, exon 14 of 32) 29111 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr17-7898 chr17 43722644 43722854 + 10.3 0.000 Intergenic Intergenic 36042 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr7-3772 chr7 83271215 83271425 + 10.3 0.000 Intergenic Intergenic -108436 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr14-5171 chr14 92082591 92082801 + 10.3 0.000 intron (NR_031765, intron 1 of 4) AluJb|SINE|Alu 23886 NM_030660 4287 Hs.532632 NM_004993 ENSG00000066427 ATXN3 AT3|ATX3|JOS|MJD|MJD1|SCA3 ataxin 3 protein-coding chr13-2342 chr13 34628113 34628323 + 10.3 0.000 intron (NR_047036, intron 1 of 2) intron (NR_047036, intron 1 of 2) 12467 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr6-3240 chr6 144662580 144662790 + 10.3 0.000 intron (NM_007124, intron 50 of 73) intron (NM_007124, intron 50 of 73) 257030 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr8-6834 chr8 97923229 97923439 + 10.3 0.000 intron (NM_002380, intron 2 of 18) intron (NM_002380, intron 2 of 18) 54270 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr19-2773 chr19 44666992 44667202 + 10.3 0.000 TTS (NM_006505) TTS (NM_006505) -4355 NM_020219 56971 Hs.416925 NM_020219 ENSG00000186567 CEACAM19 CEACM19|CEAL1 carcinoembryonic antigen related cell adhesion molecule 19 protein-coding chr18-3028 chr18 26882004 26882214 + 10.3 0.000 intron (NR_026908, intron 1 of 7) MER115|DNA|hAT-Tip100 -16306 NM_001317384 361 Hs.315369 NM_001650 ENSG00000171885 AQP4 MIWC|WCH4 aquaporin 4 protein-coding chr2-7160 chr2 201953639 201953849 + 10.3 0.000 Intergenic Intergenic -80843 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr11-9475 chr11 61972643 61972853 + 10.3 0.000 Intergenic Intergenic -5114 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr14-1503 chr14 50012696 50012906 + 10.3 0.000 intron (NR_131171, intron 6 of 8) intron (NR_131171, intron 6 of 8) -5281 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr6-3362 chr6 35780348 35780558 + 10.3 0.000 promoter-TSS (NM_001010886) promoter-TSS (NM_001010886) -566 NM_001010886 340204 Hs.131296 NM_001010886 ENSG00000204140 CLPSL1 C6orf127|ESP32|dJ510O8.6 colipase like 1 protein-coding chr1-13933 chr1 22978276 22978486 + 10.3 0.000 Intergenic AluSc8|SINE|Alu -5515 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr2-5454 chr2 124806253 124806463 + 10.3 0.000 intron (NM_130773, intron 19 of 23) intron (NM_130773, intron 19 of 23) 781071 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr11-10144 chr11 90869753 90869963 + 10.3 0.000 promoter-TSS (NR_031663) promoter-TSS (NR_031663) -656 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr13-1847 chr13 109180721 109180931 + 10.3 0.000 intron (NM_015011, intron 34 of 34) intron (NM_015011, intron 34 of 34) -13523 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr20-2603 chr20 38933018 38933228 + 10.3 0.000 intron (NM_030919, intron 1 of 3) MER20|DNA|hAT-Charlie 6706 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr3-3850 chr3 33915782 33915992 + 10.3 0.000 Intergenic Intergenic 117257 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr10-6612 chr10 93388211 93388421 + 10.3 0.000 intron (NM_013451, intron 18 of 53) intron (NM_013451, intron 18 of 53) 94018 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr1-11113 chr1 230869525 230869735 + 10.3 0.000 promoter-TSS (NM_001136494) promoter-TSS (NM_001136494) -39 NM_001136494 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr12-3362 chr12 94745719 94745929 + 10.3 0.000 Intergenic Intergenic -88574 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chrX-565 chrX 45743892 45744102 + 10.3 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 2269 NR_029635 407006 NR_029635 ENSG00000207870 MIR221 MIRN221|miRNA221|mir-221 microRNA 221 ncRNA chr7-8208 chr7 32020970 32021180 + 10.3 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 49332 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr4-6762 chr4 6490830 6491040 + 10.3 0.000 intron (NM_001206994, intron 2 of 9) MIR|SINE|MIR -18321 NM_001363388 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr7-5603 chr7 50497961 50498171 + 10.3 0.000 intron (NM_001242888, intron 6 of 12) MIR|SINE|MIR -33693 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr3-4497 chr3 61434564 61434774 + 10.3 0.000 Intergenic SVA_F|Retroposon|SVA -126902 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr15-5106 chr15 89207035 89207245 + 10.3 0.000 Intergenic Intergenic 14439 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chr7-4636 chr7 29187091 29187301 + 10.3 0.000 intron (NM_001371264, intron 1 of 15) intron (NM_001371264, intron 1 of 15) 2861 NM_001371267 chr1-10840 chr1 204203395 204203605 + 10.3 0.000 intron (NM_198447, intron 1 of 4) L2|LINE|L2 -7009 NM_002256 3814 Hs.95008 NM_002256 ENSG00000170498 KISS1 HH13|KiSS-1 KiSS-1 metastasis suppressor protein-coding chr6-3480 chr6 6700121 6700331 + 10.3 0.000 Intergenic Intergenic -77400 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr9-5300 chr9 85431736 85431946 + 10.3 0.000 Intergenic Intergenic 310188 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr22-3366 chr22 29254909 29255119 + 10.3 0.000 intron (NM_001267895, intron 14 of 14) intron (NM_001267895, intron 14 of 14) 12967 NR_138044 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr16-3979 chr16 88903789 88903999 + 10.3 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 20379 NR_135194 101927793 Hs.690953 NR_135194 ENSG00000259881 LOC101927793 - uncharacterized LOC101927793 ncRNA chr22-1480 chr22 22900590 22900800 + 10.3 0.000 Intergenic Intergenic 12879 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr13-2715 chr13 93709434 93709644 + 10.3 0.000 intron (NM_005708, intron 2 of 8) intron (NM_005708, intron 2 of 8) 148934 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr20-1705 chr20 36729101 36729311 + 10.3 0.000 intron (NM_032013, intron 1 of 15) intron (NM_032013, intron 1 of 15) 16884 NM_022477 57446 Hs.437338 NM_022477 ENSG00000101079 NDRG3 - NDRG family member 3 protein-coding chr7-886 chr7 151051168 151051378 + 10.3 0.000 exon (NM_004769, exon 6 of 11) exon (NM_004769, exon 6 of 11) 2742 NM_004769 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chr10-4023 chr10 11669420 11669630 + 10.3 0.000 Intergenic Intergenic -57736 NR_125732 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr12-6400 chr12 72626687 72626897 + 10.3 0.000 intron (NM_013381, intron 15 of 18) intron (NM_013381, intron 15 of 18) -353283 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr10-1891 chr10 110447296 110447506 + 10.3 0.000 Intergenic Intergenic -50506 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr7-5484 chr7 42253385 42253595 + 10.3 0.000 Intergenic Charlie17b|DNA|hAT-Charlie -16281 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr10-2300 chr10 27714085 27714295 + 10.3 0.000 intron (NM_001242702, intron 5 of 6) intron (NM_001242702, intron 5 of 6) -30425 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr9-1346 chr9 128255377 128255587 + 10.3 0.000 TTS (NM_001288737) TTS (NM_001288737) -10452 NR_036110 100422893 NR_036110 ENSG00000264823 MIR3154 mir-3154 microRNA 3154 ncRNA chr20-1882 chr20 46985349 46985559 + 10.3 0.000 intron (NM_172110, intron 1 of 13) intron (NM_172110, intron 1 of 13) 90611 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr2-8982 chr2 191018931 191019141 + 10.3 0.000 Intergenic Intergenic -2490 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr11-4337 chr11 72548091 72548301 + 10.3 0.000 Intergenic MER103C|DNA|hAT-Charlie -22460 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr18-881 chr18 46224177 46224387 + 10.3 0.000 intron (NM_001008239, intron 2 of 3) intron (NM_001008239, intron 2 of 3) 50248 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr10-8375 chr10 80861827 80862037 + 10.3 0.000 Intergenic Intergenic 212135 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr6-5075 chr6 116712091 116712301 + 10.3 0.000 intron (NM_001366310, intron 7 of 8) AluSx|SINE|Alu 30985 NM_001366308 3841 Hs.182971 NM_002269 ENSG00000196911 KPNA5 IPOA6|SRP6 karyopherin subunit alpha 5 protein-coding chr9-5632 chr9 120227953 120228163 + 10.3 0.000 Intergenic L2c|LINE|L2 16992 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr1-9465 chr1 35685229 35685439 + 10.3 0.000 Intergenic Intergenic 31577 NM_001348691 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr14-2690 chr14 79436690 79436900 + 10.3 0.000 intron (NM_001105250, intron 1 of 6) intron (NM_001105250, intron 1 of 6) 157415 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr19-2913 chr19 1701678 1701888 + 10.3 0.000 Intergenic Intergenic -49168 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chrX-1095 chrX 9379071 9379281 + 10.3 0.000 Intergenic MIR|SINE|MIR -84119 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr7-3432 chr7 156652985 156653195 + 10.3 0.000 intron (NR_131778, intron 3 of 8) Tigger3b|DNA|TcMar-Tigger 9289 NM_001308274 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr4-2781 chr4 20418710 20418920 + 10.3 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 26626 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr16-3822 chr16 56807043 56807253 + 10.3 0.000 intron (NM_014669, intron 5 of 21) L2a|LINE|L2 23692 NM_001242796 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr1-6636 chr1 44217939 44218149 + 10.3 0.000 intron (NM_019100, intron 3 of 9) intron (NM_019100, intron 3 of 9) 4573 NM_001034024 55929 Hs.8008 NM_019100 ENSG00000178028 DMAP1 DNMAP1|DNMTAP1|EAF2|MEAF2|SWC4 DNA methyltransferase 1 associated protein 1 protein-coding chr19-2816 chr19 49758448 49758658 + 10.3 0.000 intron (NM_021733, intron 2 of 10) intron (NM_021733, intron 2 of 10) 4753 NM_021733 60385 Hs.515858 NM_021733 ENSG00000126467 TSKS PPP1R161|STK22S1|TSKS1|TSSKS testis specific serine kinase substrate protein-coding chr7-4797 chr7 90470585 90470795 + 10.3 0.000 intron (NM_001365443, intron 1 of 6) intron (NM_001365443, intron 1 of 6) 1051 NM_001365443 102723899 Hs.731917 NM_001365443 LOC102723899 - uncharacterized LOC102723899 protein-coding chr14-2282 chr14 52142864 52143074 + 10.3 0.000 Intergenic Intergenic -73910 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr2-4815 chr2 54275482 54275692 + 10.3 0.000 intron (NM_001320589, intron 4 of 4) intron (NM_001320589, intron 4 of 4) -19358 NM_001003937 388951 Hs.620508 NM_001003937 ENSG00000178021 TSPYL6 - TSPY like 6 protein-coding chr16-2681 chr16 74309928 74310138 + 10.3 0.000 Intergenic Intergenic 13219 NM_002811 5713 Hs.440604 NM_002811 ENSG00000103035 PSMD7 MOV34|P40|Rpn8|S12 proteasome 26S subunit, non-ATPase 7 protein-coding chr16-4755 chr16 84910528 84910738 + 10.3 0.000 Intergenic Intergenic 90648 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr19-3551 chr19 45417547 45417757 + 10.3 0.000 intron (NM_001369410, intron 5 of 7) intron (NM_001369410, intron 5 of 7) 5876 NM_001369416 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr1-8591 chr1 181549651 181549861 + 10.3 0.000 intron (NM_001205293, intron 3 of 47) intron (NM_001205293, intron 3 of 47) 66239 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr3-5755 chr3 21551227 21551437 + 10.3 0.000 intron (NR_046731, intron 1 of 2) MIR1_Amn|SINE|MIR 8543 NR_046731 100874216 Hs.661720 NR_046731 ENSG00000225542 ZNF385D-AS1 - ZNF385D antisense RNA 1 ncRNA chr14-1925 chr14 19760319 19760529 + 10.3 0.000 Intergenic Intergenic 12996 NM_172194 441669 Hs.553828 NM_172194 ENSG00000182652 OR4Q3 C14orf13|HSA6|OR14-3|OR4Q4|c14_5008 olfactory receptor family 4 subfamily Q member 3 protein-coding chr2-4871 chr2 109122136 109122346 + 10.3 0.000 Intergenic LTR16C|LTR|ERVL -6964 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr5-1805 chr5 72835782 72835992 + 10.3 0.000 intron (NM_001364292, intron 1 of 24) MLT1A1-int|LTR|ERVL-MaLR -12252 NM_001364296 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chr5-4281 chr5 147851025 147851235 + 10.3 0.000 Intergenic Intergenic -11899 NM_003122 6690 Hs.407856 NM_003122 ENSG00000164266 SPINK1 PCTT|PSTI|Spink3|TATI|TCP serine peptidase inhibitor, Kazal type 1 protein-coding chr19-4703 chr19 18735342 18735552 + 10.3 0.000 intron (NM_015321, intron 1 of 13) intron (NM_015321, intron 1 of 13) 51767 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr7-2944 chr7 149811837 149812047 + 10.3 0.000 intron (NR_163594, intron 64 of 102) intron (NR_163594, intron 64 of 102) -26433 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding chr9-1205 chr9 123367972 123368182 + 10.3 0.000 promoter-TSS (NR_104603) promoter-TSS (NR_104603) -702 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr13-2713 chr13 93444903 93445113 + 10.3 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 218201 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr9-2125 chr9 99895182 99895392 + 10.3 0.000 intron (NR_038853, intron 1 of 2) L1M1|LINE|L1 11314 NR_038853 441461 Hs.163155 NR_038853 ENSG00000255145 STX17-AS1 - STX17 antisense RNA 1 ncRNA chr8-1448 chr8 141278509 141278719 + 10.3 0.000 Intergenic Intergenic -23985 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr14-2015 chr14 58584459 58584669 + 10.3 0.000 Intergenic L1ME1|LINE|L1 -49504 NR_046093 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr22-2505 chr22 22839742 22839952 + 10.3 0.000 Intergenic AluJb|SINE|Alu 17071 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr11-4618 chr11 11183852 11184062 + 10.3 0.000 Intergenic Intergenic 169293 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr5-2717 chr5 111092300 111092510 + 10.3 0.000 exon (NM_139281, exon 1 of 23) exon (NM_139281, exon 1 of 23) 233 NM_139281 134430 Hs.533237 NM_139281 ENSG00000134987 WDR36 GLC1G|TA-WDRP|TAWDRP|UTP21 WD repeat domain 36 protein-coding chr1-8165 chr1 17133168 17133378 + 10.3 0.000 Intergenic Intergenic -13822 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr11-4142 chr11 45505969 45506179 + 10.3 0.000 Intergenic Intergenic 134677 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr5-2319 chr5 60334471 60334681 + 10.3 0.000 intron (NM_001364599, intron 1 of 16) intron (NM_001364599, intron 1 of 16) 38087 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr18-3360 chr18 58190956 58191166 + 10.3 0.000 intron (NM_001144965, intron 2 of 30) AluJr|SINE|Alu -4344 NM_001144970 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr8-1793 chr8 97452825 97453035 + 10.3 0.000 Intergenic A-rich|Low_complexity|Low_complexity -6433 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chrX-1889 chrX 132688666 132688876 + 10.3 0.000 intron (NM_001077188, intron 4 of 5) intron (NM_001077188, intron 4 of 5) 21129 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr8-469 chr8 28386111 28386321 + 10.3 0.000 intron (NM_018660, intron 1 of 9) CpG 244 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr1-16280 chr1 213557072 213557282 + 10.3 0.000 Intergenic MER115|DNA|hAT-Tip100 -367572 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr6-2254 chr6 53437325 53437535 + 10.3 0.000 Intergenic L2c|LINE|L2 -88251 NM_001242831 60481 Hs.520189 NM_021814 ENSG00000012660 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding chr10-5516 chr10 83946051 83946261 + 10.3 0.000 Intergenic Intergenic -193353 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr16-2768 chr16 10878722 10878932 + 10.3 0.000 intron (NR_104444, intron 1 of 17) intron (NR_104444, intron 1 of 17) 1625 NM_001286403 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding chr5-2066 chr5 138975303 138975513 + 10.3 0.000 intron (NM_022464, intron 7 of 9) intron (NM_022464, intron 7 of 9) 100008 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr8-1418 chr8 81842037 81842247 + 10.3 0.000 promoter-TSS (NM_152837) promoter-TSS (NM_152837) 43 NR_145472 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr3-9862 chr3 80280138 80280348 + 10.3 0.000 Intergenic L1PA16|LINE|L1 -484654 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr1-2228 chr1 156114587 156114797 + 10.3 0.000 promoter-TSS (NM_170708) promoter-TSS (NM_170708) -19 NM_170707 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr16-2635 chr16 18562064 18562274 + 10.3 0.000 promoter-TSS (NM_173614).3 promoter-TSS (NM_173614).3 -57 NM_173614 283820 Hs.460141 NM_173614 ENSG00000185164 NOMO2 Nomo|PM5 NODAL modulator 2 protein-coding chr21-466 chr21 42340217 42340427 + 10.3 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger 10672 NM_005423 7032 Hs.2979 NM_005423 ENSG00000160181 TFF2 SML1|SP trefoil factor 2 protein-coding chr1-13116 chr1 194047000 194047210 + 10.3 0.000 Intergenic LOR1b|LTR|ERV1 742360 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr15-4176 chr15 95875206 95875416 + 10.3 0.000 Intergenic Intergenic 252530 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr12-2840 chr12 131851508 131851718 + 10.3 0.000 3' UTR (NM_016155, exon 10 of 10) 3' UTR (NM_016155, exon 10 of 10) 23220 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr9-5604 chr9 114989670 114989880 + 10.3 0.000 Intergenic Intergenic -59180 NM_001244 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr6-637 chr6 100228960 100229170 + 10.3 0.000 Intergenic CpG 234610 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr18-1460 chr18 48408616 48408826 + 10.3 0.000 intron (NM_001371286, intron 1 of 4) CpG-12532 662 NM_001371285 chr12-6207 chr12 24174993 24175203 + 10.3 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -37323 NR_030625 100126320 NR_030625 ENSG00000216192 MIR920 MIRN920|hsa-mir-920 microRNA 920 ncRNA chr6-5108 chr6 119937604 119937814 + 10.3 0.000 Intergenic L1PA15-16|LINE|L1 -77470 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr10-4317 chr10 21398530 21398740 + 10.3 0.000 Intergenic Intergenic -25685 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr10-3751 chr10 121525204 121525414 + 10.3 0.000 intron (NR_073009, intron 4 of 16) intron (NR_073009, intron 4 of 16) 6005 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr1-5892 chr1 7929651 7929861 + 10.3 0.000 intron (NM_001561, intron 8 of 8) L1MD2|LINE|L1 13409 NM_001561 3604 Hs.86447 NM_001561 ENSG00000049249 TNFRSF9 4-1BB|CD137|CDw137|ILA TNF receptor superfamily member 9 protein-coding chr14-1530 chr14 58731523 58731733 + 10.3 0.000 Intergenic Intergenic 92791 NR_046095 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr2-4535 chr2 41561393 41561603 + 10.3 0.000 Intergenic Intergenic -316057 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr11-4183 chr11 59537110 59537320 + 10.3 0.000 Intergenic Intergenic 22302 NM_001004711 390199 Hs.553757 NM_001004711 ENSG00000172742 OR4D9 OR11-253 olfactory receptor family 4 subfamily D member 9 protein-coding chr11-8983 chr11 22169340 22169550 + 10.3 0.000 Intergenic Intergenic -23640 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr22-978 chr22 28594857 28595067 + 10.3 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) 84903 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding chr17-2118 chr17 10729206 10729416 + 10.3 0.000 promoter-TSS (NR_073455) promoter-TSS (NR_073455) -466 NR_073457 101101775 Hs.569782 NR_073455 ENSG00000263400 TMEM220-AS1 - TMEM220 antisense RNA 1 ncRNA chr2-5857 chr2 238279376 238279586 + 10.3 0.000 intron (NM_022817, intron 1 of 22) intron (NM_022817, intron 1 of 22) 9129 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr1-4538 chr1 48642208 48642418 + 10.3 0.000 intron (NM_001323575, intron 8 of 12) intron (NM_001323575, intron 8 of 12) 134578 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr10-5984 chr10 124391055 124391265 + 10.3 0.000 Intergenic Intergenic 27763 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr8-1770 chr8 55103025 55103235 + 10.3 0.000 exon (NM_052898, exon 1 of 3) exon (NM_052898, exon 1 of 3) 1102 NM_052898 114786 Hs.130197 NM_052898 ENSG00000206579 XKR4 XRG4 XK related 4 protein-coding chr13-3338 chr13 70335510 70335720 + 10.3 0.000 Intergenic MSTB|LTR|ERVL-MaLR -227122 NM_001286725 57626 Hs.508201 NM_020866 ENSG00000150361 KLHL1 MRP2 kelch like family member 1 protein-coding chr7-6561 chr7 65745750 65745960 + 10.3 0.000 intron (NR_038378, intron 2 of 7) LTR40c|LTR|ERVL 5069 NR_103527 441242 Hs.373941 NM_001013464 ENSG00000272693 LOC441242 - uncharacterized LOC441242 ncRNA chr4-3920 chr4 154004190 154004400 + 10.3 0.000 Intergenic Intergenic -215212 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr2-2133 chr2 85536593 85536803 + 10.3 0.000 TTS (NR_038942) TTS (NR_038942) 2188 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr13-2641 chr13 79161759 79161969 + 10.3 0.000 Intergenic MER115|DNA|hAT-Tip100 244357 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr17-5064 chr17 3554824 3555034 + 10.3 0.000 intron (NM_001258205, intron 1 of 17) intron (NM_001258205, intron 1 of 17) 2883 NM_145068 162514 Hs.446255 NM_145068 ENSG00000167723 TRPV3 FNEPPK2|OLMS|VRL3 transient receptor potential cation channel subfamily V member 3 protein-coding chr18-1766 chr18 9970404 9970614 + 10.3 0.000 Intergenic Intergenic 56493 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr2-10147 chr2 75747034 75747244 + 10.3 0.000 Intergenic AluSx1|SINE|Alu -36224 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr22-1587 chr22 48644766 48644976 + 10.3 0.000 intron (NM_015381, intron 1 of 3) L2b|LINE|L2 68531 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr6-3663 chr6 144260002 144260212 + 10.3 0.000 Intergenic L2b|LINE|L2 -31630 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr4-5202 chr4 162770915 162771125 + 10.3 0.000 Intergenic Intergenic 322608 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr9-2829 chr9 125656181 125656391 + 10.3 0.000 intron (NM_001006619, intron 4 of 10) intron (NM_001006619, intron 4 of 10) 50922 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr16-2457 chr16 85442215 85442425 + 10.3 0.000 Intergenic L2a|LINE|L2 -135995 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr9-4055 chr9 110094852 110095062 + 10.3 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) -30544 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr17-5367 chr17 31010388 31010598 + 10.3 0.000 intron (NM_001350579, intron 1 of 3) intron (NM_001350579, intron 1 of 3) 2209 NM_001350579 107984974 Hs.558901 NM_001350575 LOC107984974 - uncharacterized LOC107984974 protein-coding chr1-4142 chr1 3631603 3631813 + 10.3 0.000 intron (NM_017818, intron 10 of 11) intron (NM_017818, intron 10 of 11) 6693 NM_182752 127262 Hs.20529 NM_182752 ENSG00000158109 TPRG1L FAM79A|h-mover|mover tumor protein p63 regulated 1 like protein-coding chr15-1608 chr15 80494395 80494605 + 10.3 0.000 intron (NM_014862, intron 5 of 18) intron (NM_014862, intron 5 of 18) 68444 NR_120363 101929586 Hs.569426 NR_120363 ENSG00000259175 LOC101929586 - uncharacterized LOC101929586 ncRNA chr2-11154 chr2 144944188 144944398 + 10.3 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 276326 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr6-2756 chr6 117167881 117168091 + 10.3 0.000 Intergenic Intergenic -97572 NM_153453 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr17-4895 chr17 71983477 71983687 + 10.3 0.000 Intergenic Intergenic 42397 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA chr18-627 chr18 12038646 12038856 + 10.3 0.000 Intergenic CpG -55092 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr6-3535 chr6 38891306 38891516 + 10.3 0.000 intron (NM_001371, intron 57 of 91) intron (NM_001371, intron 57 of 91) 61696 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr7-4078 chr7 17690033 17690243 + 10.3 0.000 Intergenic Intergenic -131229 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr2-11355 chr2 206571676 206571886 + 10.3 0.000 exon (NM_003812, exon 17 of 26) exon (NM_003812, exon 17 of 26) -72446 NM_001102659 200726 NM_001102659 ENSG00000235118 FAM237A - family with sequence similarity 237 member A protein-coding chr6-2238 chr6 46473992 46474202 + 10.3 0.000 intron (NM_001251973, intron 1 of 4) intron (NM_001251973, intron 1 of 4) 17226 NM_001251974 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr11-2868 chr11 20049254 20049464 + 10.3 0.000 promoter-TSS (NR_046672) promoter-TSS (NR_046672) -56 NR_046672 100874014 Hs.557916 NR_046672 ENSG00000254453 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA chr11-4125 chr11 40273962 40274172 + 10.3 0.000 intron (NM_001258419, intron 4 of 6) intron (NM_001258419, intron 4 of 6) 19063 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr2-7317 chr2 240732737 240732947 + 10.3 0.000 intron (NM_004321, intron 36 of 46) intron (NM_004321, intron 36 of 46) 40976 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr22-2972 chr22 50216377 50216587 + 10.3 0.000 intron (NM_031454, intron 6 of 8) intron (NM_031454, intron 6 of 8) 15471 NM_031454 83642 Hs.365405 NM_031454 ENSG00000073169 SELENOO SELO selenoprotein O protein-coding chr5-4667 chr5 37663087 37663297 + 10.3 0.000 intron (NM_001345998, intron 10 of 17) intron (NM_001345998, intron 10 of 17) 171630 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr20-2657 chr20 44437070 44437280 + 10.3 0.000 Intergenic MER113|DNA|hAT-Charlie 13382 NR_109893 101927242 Hs.143307 NR_109893 ENSG00000168746 LINC01430 - long intergenic non-protein coding RNA 1430 ncRNA chr5-3567 chr5 64698751 64698961 + 10.3 0.000 intron (NM_001164442, intron 2 of 2) intron (NM_001164442, intron 2 of 2) 8353 NM_001164442 100132916 Hs.591776 NM_001164442 ENSG00000145642 SHISAL2B FAM159B shisa like 2B protein-coding chr8-6820 chr8 97227149 97227359 + 10.3 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) 50674 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr2-7298 chr2 239081470 239081680 + 10.3 0.000 intron (NM_006037, intron 21 of 26) intron (NM_006037, intron 21 of 26) 4351 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr6-4102 chr6 150977468 150977678 + 10.3 0.000 intron (NM_001350486, intron 20 of 27) A-rich|Low_complexity|Low_complexity -29435 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr2-7294 chr2 237855265 237855475 + 10.3 0.000 Intergenic L1MC4|LINE|L1 -4253 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr16-6040 chr16 10471063 10471273 + 10.3 0.000 intron (NM_001256160, intron 8 of 11) L1MEc|LINE|L1 57030 NR_149081 106144584 Hs.531561 NR_149081 ENSG00000260468 LINC01290 - long intergenic non-protein coding RNA 1290 ncRNA chr8-1852 chr8 462193 462403 + 10.3 0.000 intron (NM_183421, intron 8 of 10) L1MB8|LINE|L1 53454 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr2-4236 chr2 219407020 219407230 + 10.3 0.000 Intergenic L3b|LINE|CR1 -7118 NM_001319117 23549 Hs.258551 NM_012100 ENSG00000123992 DNPEP ASPEP|DAP aspartyl aminopeptidase protein-coding chr20-2691 chr20 46451033 46451243 + 10.3 0.000 Intergenic Intergenic 6505 NR_045983 100130934 Hs.712133 NM_173643 ZNF663P ZNF663 zinc finger protein 663, pseudogene pseudo chr20-2737 chr20 50075776 50075986 + 10.3 0.000 Intergenic Intergenic -34252 NR_051976 100887755 Hs.195705 NR_051976 TRERNA1 LINC00651|treRNA translation regulatory long non-coding RNA 1 ncRNA chr6-6051 chr6 131198579 131198789 + 10.3 0.000 intron (NM_016377, intron 5 of 7) L1MEc|LINE|L1 -51720 NM_004842 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr15-3146 chr15 67068416 67068626 + 10.3 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) 2919 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr6-1471 chr6 39887659 39887869 + 10.3 0.000 intron (NM_015345, intron 16 of 24) intron (NM_015345, intron 16 of 24) 9616 NR_125831 100505635 Hs.668513 NR_125831 ENSG00000235033 LOC100505635 - uncharacterized LOC100505635 ncRNA chr2-5249 chr2 53021344 53021554 + 10.3 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -318834 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr2-13318 chr2 131535427 131535637 + 10.3 0.000 Intergenic Intergenic 7644 NM_138770 90557 Hs.351461 NM_138770 ENSG00000163040 CCDC74A - coiled-coil domain containing 74A protein-coding chr14-1270 chr14 57791812 57792022 + 10.3 0.000 intron (NR_159373, intron 1 of 10) L1PA7|LINE|L1 73082 NM_001352012 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr8-1308 chr8 119586573 119586783 + 10.3 0.000 intron (NM_001330600, intron 14 of 25) intron (NM_001330600, intron 14 of 25) 6330 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr15-4131 chr15 83202481 83202691 + 10.3 0.000 intron (NM_016073, intron 1 of 5) intron (NM_016073, intron 1 of 5) 5237 NM_016073 50810 Hs.513954 NM_016073 ENSG00000166503 HDGFL3 CGI-142|HDGF-2|HDGF2|HDGFRP3|HRP-3 HDGF like 3 protein-coding chr7-1387 chr7 786544 786754 + 10.3 0.000 TTS (NM_017802) TTS (NM_017802) -28908 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr6-4229 chr6 5456371 5456581 + 10.3 0.000 intron (NR_125848, intron 1 of 1) AluSx3|SINE|Alu 1599 NR_125846 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA chr22-1330 chr22 17843295 17843505 + 10.3 0.000 intron (NM_001122731, intron 18 of 19) intron (NM_001122731, intron 18 of 19) 63486 NM_001136004 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding KN538372.1-2 KN538372.1 89323 89533 + 10.3 0.000 NA NA NA NA chr2-5193 chr2 37721166 37721376 + 10.3 0.000 Intergenic Intergenic -48736 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr3-3982 chr3 54114131 54114341 + 10.3 0.000 Intergenic L2a|LINE|L2 -8316 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr16-5795 chr16 89404667 89404877 + 10.3 0.000 intron (NR_045839, intron 2 of 9) MIRc|SINE|MIR -26146 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr1-5616 chr1 16267719 16267929 + 10.3 0.000 intron (NM_018994, intron 4 of 9) intron (NM_018994, intron 4 of 9) -30641 NM_030907 79363 Hs.546430 NM_030907 ENSG00000132881 CPLANE2 C1orf89|RSG1 ciliogenesis and planar polarity effector 2 protein-coding chr1-8699 chr1 226133688 226133898 + 10.3 0.000 Intergenic L2|LINE|L2 -14210 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr5-6917 chr5 134943999 134944209 + 10.3 0.000 intron (NM_032151, intron 2 of 3) intron (NM_032151, intron 2 of 3) -23803 NM_178019 347732 Hs.631804 NM_178019 ENSG00000152705 CATSPER3 CACRC cation channel sperm associated 3 protein-coding chr9-2800 chr9 120417268 120417478 + 10.3 0.000 intron (NR_073558, intron 27 of 37) intron (NR_073558, intron 27 of 37) 162794 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr17-3342 chr17 76578482 76578692 + 10.3 0.000 intron (NM_006456, intron 2 of 8) intron (NM_006456, intron 2 of 8) 7273 NM_006456 10610 Hs.592105 NM_006456 ENSG00000070731 ST6GALNAC2 SAITL1|SIAT7|SIAT7B|SIATL1|ST6GalNAII|STHM ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein-coding chr11-8729 chr11 7528548 7528758 + 10.3 0.000 intron (NM_003621, intron 1 of 23) intron (NM_003621, intron 1 of 23) 14654 NM_003621 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr19-2818 chr19 49987077 49987287 + 10.3 0.000 intron (NM_001308420, intron 12 of 12) L2|LINE|L2 17518 NM_001348364 400709 Hs.568076 NM_001348364 SIGLEC16 SIGLECP16|Siglec-P16 sialic acid binding Ig like lectin 16 (gene/pseudogene) protein-coding chr15-3014 chr15 56416065 56416275 + 10.3 0.000 intron (NM_198524, intron 10 of 12) L1PA14|LINE|L1 48967 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr2-6661 chr2 10063615 10063825 + 10.3 0.000 intron (NM_001037160, intron 2 of 2) intron (NM_001037160, intron 2 of 2) 16691 NM_001037160 192668 Hs.27092 NM_001037160 ENSG00000205795 CYS1 - cystin 1 protein-coding chr6-2494 chr6 101392918 101393128 + 10.3 0.000 Intergenic Intergenic -5962 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr14-1774 chr14 100529725 100529935 + 10.3 0.000 exon (NM_001350947, exon 7 of 7) exon (NM_001350947, exon 7 of 7) 38240 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr4-3365 chr4 7902478 7902688 + 10.3 0.000 intron (NM_001371091, intron 1 of 17) intron (NM_001371091, intron 1 of 17) -30275 NM_001371090 chr14-1864 chr14 74111524 74111734 + 10.3 0.000 intron (NM_001024674, intron 5 of 5) (TATT)n|Simple_repeat|Simple_repeat 26676 NM_001024674 91750 Hs.612866 NM_001024674 ENSG00000205659 LIN52 C14orf46|c14_5549 lin-52 DREAM MuvB core complex component protein-coding chr4-3659 chr4 26964680 26964890 + 10.3 0.000 intron (NM_001169118, intron 3 of 12) L2c|LINE|L2 103944 NM_001169118 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chr4-4586 chr4 76050647 76050857 + 10.3 0.000 intron (NM_001130017, intron 1 of 9) LTR12C|LTR|ERV1 -14682 NM_005409 6373 Hs.632592 NM_005409 ENSG00000169248 CXCL11 H174|I-TAC|IP-9|IP9|SCYB11|SCYB9B|b-R1 C-X-C motif chemokine ligand 11 protein-coding chr14-4707 chr14 58705232 58705442 + 10.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 66500 NR_046095 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr9-2368 chr9 117047337 117047547 + 10.3 0.000 intron (NM_014010, intron 4 of 21) intron (NM_014010, intron 4 of 21) 133759 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr6-694 chr6 35214362 35214572 + 10.3 0.000 exon (NM_152753, exon 1 of 22) exon (NM_152753, exon 1 of 22) 511 NM_001303136 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding chr17-6822 chr17 12483542 12483752 + 10.3 0.000 Intergenic Intergenic -66321 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chr2-8434 chr2 119809964 119810174 + 10.3 0.000 intron (NM_002830, intron 2 of 26) intron (NM_002830, intron 2 of 26) 50147 NM_002830 5775 Hs.469809 NM_002830 ENSG00000088179 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase non-receptor type 4 protein-coding chr19-3132 chr19 17580737 17580947 + 10.3 0.000 exon (NM_024656, exon 11 of 12) exon (NM_024656, exon 11 of 12) 25193 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr6-2429 chr6 159184565 159184775 + 10.3 0.000 intron (NM_032532, intron 1 of 22) intron (NM_032532, intron 1 of 22) -14663 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA chr17-3563 chr17 79125830 79126040 + 10.3 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 50998 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr1-10137 chr1 103589001 103589211 + 10.3 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 19702 NR_024438 648740 Hs.721681 NR_024438 ACTG1P4 ACTGP4 actin gamma 1 pseudogene 4 pseudo chr5-2786 chr5 177433870 177434080 + 10.3 0.000 exon (NM_001364164, exon 8 of 15) exon (NM_001364164, exon 8 of 15) 7289 NM_002082 2870 Hs.235116 NM_002082 ENSG00000198055 GRK6 GPRK6 G protein-coupled receptor kinase 6 protein-coding chrX-1909 chrX 142089316 142089526 + 10.3 0.000 Intergenic Intergenic 115869 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr19-2810 chr19 48948378 48948588 + 10.3 0.000 Intergenic MER9a3|LTR|ERVK -6377 NM_001291430 581 Hs.624291 NM_004324 ENSG00000087088 BAX BCL2L4 BCL2 associated X, apoptosis regulator protein-coding chr3-8199 chr3 42712895 42713105 + 10.3 0.000 intron (NM_144719, intron 14 of 15) intron (NM_144719, intron 14 of 15) -10202 NM_020707 57467 Hs.476041 NM_020707 ENSG00000010282 HHATL C3orf3|GUP1|MBOAT3|MSTP002|OACT3 hedgehog acyltransferase like protein-coding chr7-2840 chr7 102286276 102286486 + 10.3 0.000 promoter-TSS (NM_001359228) promoter-TSS (NM_001359228) -487 NM_001359230 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr4-8577 chr4 168449833 168450043 + 10.3 0.000 intron (NM_001345927, intron 8 of 37) LTR8|LTR|ERV1 30554 NM_001345927 91351 Hs.535011 NM_001012967 ENSG00000181381 DDX60L - DExD/H-box 60 like protein-coding chr1-6441 chr1 16411906 16412116 + 10.3 0.000 intron (NM_001353349, intron 2 of 10) L2|LINE|L2 25413 NM_198546 374955 Hs.705501 NM_198546 ENSG00000187144 SPATA21 spergen-2|spergen2 spermatogenesis associated 21 protein-coding chr1-9147 chr1 19322012 19322222 + 10.3 0.000 intron (NM_001040125, intron 2 of 7) intron (NM_001040125, intron 2 of 7) 9791 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr8-4373 chr8 102332799 102333009 + 10.3 0.000 intron (NM_001282873, intron 9 of 58) L2c|LINE|L2 79785 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr5-5769 chr5 173282072 173282282 + 10.3 0.000 Intergenic Intergenic -21553 NR_162132 113219469 NR_162132 MIR12118 - microRNA 12118 ncRNA chr17-5232 chr17 17394413 17394623 + 10.3 0.000 Intergenic L2a|LINE|L2 -82482 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr1-14822 chr1 74244772 74244982 + 10.3 0.000 intron (NM_015978, intron 2 of 24) intron (NM_015978, intron 2 of 24) 9490 NM_015978 51086 Hs.480085 NM_015978 ENSG00000116783 TNNI3K CARK|CCDD TNNI3 interacting kinase protein-coding chr11-3599 chr11 65782734 65782944 + 10.3 0.000 Intergenic Intergenic -1863 NM_138368 91056 Hs.591957 NM_138368 ENSG00000254470 AP5B1 AP-5|PP1030 adaptor related protein complex 5 subunit beta 1 protein-coding chr17-2584 chr17 75737494 75737704 + 10.3 0.000 exon (NM_000213, exon 18 of 40) exon (NM_000213, exon 18 of 40) 12903 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr7-8628 chr7 69903836 69904046 + 10.3 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 305466 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr9-1723 chr9 114173041 114173251 + 10.3 0.000 intron (NM_032888, intron 3 of 60) intron (NM_032888, intron 3 of 60) 17609 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr3-8380 chr3 95056902 95057112 + 10.3 0.000 Intergenic LTR37B|LTR|ERV1 118744 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr20-1234 chr20 34472715 34472925 + 10.3 0.000 intron (NM_001257137, intron 17 of 25) intron (NM_001257137, intron 17 of 25) 6495 NR_030374 693229 NR_030374 ENSG00000207997 MIR644A MIR644|MIRN644|hsa-mir-644|hsa-mir-644a microRNA 644a ncRNA chr9-1316 chr9 135977896 135978106 + 10.3 0.000 Intergenic Intergenic -16628 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr17-2375 chr17 76570151 76570361 + 10.3 0.000 intron (NM_006456, intron 6 of 8) intron (NM_006456, intron 6 of 8) 8623 NR_004395 677848 NR_004395 ENSG00000278261 SNORD1A R38A|snR38A small nucleolar RNA, C/D box 1A snoRNA chr5-3152 chr5 67453676 67453886 + 10.3 0.000 Intergenic Intergenic 193008 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr5-5211 chr5 114629497 114629707 + 10.3 0.000 intron (NR_130785, intron 3 of 12) L1MA6|LINE|L1 53561 NR_134282 101927059 Hs.385789 NR_134282 ENSG00000251542 LINC01957 - long intergenic non-protein coding RNA 1957 ncRNA chr5-2747 chr5 139572203 139572413 + 10.3 0.000 intron (NM_181838, intron 2 of 7) intron (NM_181838, intron 2 of 7) 10969 NM_003339 7322 Hs.108332 NM_003339 ENSG00000131508 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin conjugating enzyme E2 D2 protein-coding chr21-386 chr21 33131782 33131992 + 10.3 0.000 Intergenic Intergenic -8187 NR_109961 101928107 Hs.382669 NR_109961 ENSG00000226527 LOC101928107 - uncharacterized LOC101928107 ncRNA chr19-4424 chr19 3984094 3984304 + 10.3 0.000 exon (NM_001961, exon 2 of 15) exon (NM_001961, exon 2 of 15) 1264 NM_001961 1938 Hs.515070 NM_001961 ENSG00000167658 EEF2 EEF-2|EF-2|EF2|SCA26 eukaryotic translation elongation factor 2 protein-coding chr20-3136 chr20 36021332 36021542 + 10.3 0.000 intron (NR_130714, intron 8 of 8) L1MB3|LINE|L1 29523 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr5-2107 chr5 53917642 53917852 + 10.3 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) 33852 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr3-10166 chr3 116920717 116920927 + 10.3 0.000 promoter-TSS (NR_121607) promoter-TSS (NR_121607) -609 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr15-1783 chr15 77418463 77418673 + 10.3 0.000 intron (NM_024776, intron 1 of 7) intron (NM_024776, intron 1 of 7) 1536 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding chr4-2298 chr4 39713875 39714085 + 10.3 0.000 intron (NM_001111113, intron 1 of 4) AluJb|SINE|Alu 15844 NM_001312647 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr10-2702 chr10 102517640 102517850 + 10.3 0.000 intron (NM_001178133, intron 2 of 10) intron (NM_001178133, intron 2 of 10) 13773 NM_001178133 51684 Hs.404089 NM_016169 ENSG00000107882 SUFU JBTS32|PRO1280|SUFUH|SUFUXL SUFU negative regulator of hedgehog signaling protein-coding chr10-924 chr10 119104584 119104794 + 10.3 0.000 intron (NM_207009, intron 1 of 8) CpG 576 NR_130122 404636 Hs.434241 NM_207009 ENSG00000119979 DENND10 FAM45A DENN domain containing 10 protein-coding chr6-7806 chr6 99795665 99795875 + 10.3 0.000 Intergenic L2c|LINE|L2 188996 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr15-812 chr15 77793055 77793265 + 10.3 0.000 intron (NM_001301186, intron 2 of 5) intron (NM_001301186, intron 2 of 5) -6111 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr6-4456 chr6 35224735 35224945 + 10.3 0.000 intron (NM_001303136, intron 1 of 21) intron (NM_001303136, intron 1 of 21) 10884 NM_001303136 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding chr16-2363 chr16 57136428 57136638 + 10.3 0.000 intron (NM_152727, intron 13 of 15) intron (NM_152727, intron 13 of 15) 43950 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr1-7400 chr1 32789383 32789593 + 10.3 0.000 intron (NM_003680, intron 6 of 12) intron (NM_003680, intron 6 of 12) 23861 NM_001198972 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr1-4647 chr1 183563735 183563945 + 10.3 0.000 intron (NM_001190794, intron 10 of 13) intron (NM_001190794, intron 10 of 13) 26764 NM_001190789 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr15-2108 chr15 68252932 68253142 + 10.3 0.000 Intergenic L1ME3F|LINE|L1 -23309 NM_017882 54982 Hs.584921 NM_017882 ENSG00000128973 CLN6 CLN4A|HsT18960|nclf CLN6 transmembrane ER protein protein-coding chr3-2023 chr3 53806347 53806557 + 10.3 0.000 intron (NM_001128840, intron 45 of 47) intron (NM_001128840, intron 45 of 47) 39967 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr10-4536 chr10 97151458 97151668 + 10.3 0.000 intron (NM_003061, intron 4 of 36) intron (NM_003061, intron 4 of 36) 34396 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr10-3166 chr10 78362687 78362897 + 10.3 0.000 Intergenic Intergenic 95450 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr2-12436 chr2 57890481 57890691 + 10.3 0.000 Intergenic Intergenic -17065 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr11-4176 chr11 57772683 57772893 + 10.3 0.000 intron (NM_001085467, intron 1 of 16) (TC)n|Simple_repeat|Simple_repeat 10986 NM_001206887 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr3-3130 chr3 155391661 155391871 + 10.3 0.000 Intergenic Intergenic -94037 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr1-5671 chr1 38544620 38544830 + 10.3 0.000 Intergenic Intergenic 69529 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr4-1464 chr4 182189536 182189746 + 10.3 0.000 Intergenic Intergenic 20348 NR_031640 100302270 NR_031640 ENSG00000221227 MIR1305 MIRN1305|hsa-mir-1305|mir-1305 microRNA 1305 ncRNA chr12-3413 chr12 107903670 107903880 + 10.3 0.000 promoter-TSS (NR_037629) promoter-TSS (NR_037629) -4 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr1-15596 chr1 160717143 160717353 + 10.3 0.000 Intergenic AluSz|SINE|Alu -5397 NM_001256030 962 Hs.243564 NM_001778 ENSG00000117091 CD48 BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48 CD48 molecule protein-coding chr14-4853 chr14 69837932 69838142 + 10.3 0.000 Intergenic AluJb|SINE|Alu 26277 NR_149012 100506358 NR_149012 LOC100506358 - uncharacterized LOC100506358 ncRNA chr4-3964 chr4 183195871 183196081 + 10.3 0.000 intron (NM_024949, intron 2 of 22) MSTA|LTR|ERVL-MaLR 44658 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr3-8423 chr3 110102263 110102473 + 10.3 0.000 Intergenic Intergenic 499540 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr1-6219 chr1 215033320 215033530 + 10.3 0.000 intron (NM_001017424, intron 1 of 6) L1MC1|LINE|L1 27883 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr7-4550 chr7 4669429 4669639 + 10.3 0.000 Intergenic L1MCa|LINE|L1 -12761 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr9-1936 chr9 18438407 18438617 + 10.3 0.000 Intergenic Intergenic -35641 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr3-5979 chr3 47564070 47564280 + 10.3 0.000 intron (NM_001206944, intron 3 of 3) intron (NM_001206944, intron 3 of 3) 14690 NM_001206943 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr15-4781 chr15 71061077 71061287 + 10.3 0.000 Intergenic L1MA5|LINE|L1 -80267 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr2-3033 chr2 69695473 69695683 + 10.3 0.000 intron (NM_001320698, intron 2 of 14) intron (NM_001320698, intron 2 of 14) -46556 NM_001153 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr17-3507 chr17 58006466 58006676 + 10.3 0.000 intron (NM_006924, intron 1 of 3) CpG 675 NM_001078166 6426 Hs.68714 NM_006924 ENSG00000136450 SRSF1 ASF|SF2|SF2p33|SFRS1|SRp30a serine and arginine rich splicing factor 1 protein-coding chr5-2151 chr5 95960128 95960338 + 10.3 0.000 intron (NM_012081, intron 1 of 11) intron (NM_012081, intron 1 of 11) 1618 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr12-5532 chr12 132440098 132440308 + 10.3 0.000 Intergenic Intergenic -49948 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr17-3322 chr17 66524070 66524280 + 10.3 0.000 intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -107321 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr4-2200 chr4 123650192 123650402 + 10.3 0.000 non-coding (NR_027105, exon 1 of 6) non-coding (NR_027105, exon 1 of 6) 306 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr21-794 chr21 45748639 45748849 + 10.3 0.000 intron (NM_001348243, intron 1 of 15) intron (NM_001348243, intron 1 of 15) 730 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr17-3581 chr17 80487672 80487882 + 10.3 0.000 Intergenic L2b|LINE|L2 -11170 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr19-2762 chr19 41951877 41952087 + 10.3 0.000 Intergenic Intergenic 7339 NM_006423 10567 Hs.11417 NM_006423 ENSG00000105404 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 protein-coding chr1-14406 chr1 44569949 44570159 + 10.3 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 24561 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr2-11103 chr2 128829386 128829596 + 10.3 0.000 Intergenic L1PA7|LINE|L1 -35109 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr20-2769 chr20 52237849 52238059 + 10.3 0.000 Intergenic MIRc|SINE|MIR -45969 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr7-9141 chr7 111038325 111038535 + 10.3 0.000 intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) -52576 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr17-2683 chr17 44204442 44204652 + 10.3 0.000 TTS (NM_001076684) TTS (NM_001076684) 3292 NR_106840 102465469 NR_106840 ENSG00000275107 MIR6782 hsa-mir-6782 microRNA 6782 ncRNA chr6-3262 chr6 150249242 150249452 + 10.3 0.000 3' UTR (NM_030949, exon 4 of 4) 3' UTR (NM_030949, exon 4 of 4) 106303 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr5-2640 chr5 77989 78199 + 10.3 0.000 Intergenic Intergenic -14074 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr2-4669 chr2 203839533 203839743 + 10.3 0.000 Intergenic L2b|LINE|L2 -28133 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr17-5749 chr17 59559115 59559325 + 10.3 0.000 Intergenic Intergenic -6390 NM_001166301 79665 Hs.29403 NM_024612 ENSG00000108406 DHX40 ARG147|DDX40|PAD DEAH-box helicase 40 protein-coding chr2-6058 chr2 132268016 132268226 + 10.3 0.000 Intergenic Intergenic -10088 NR_152415 554226 Hs.380689 NM_001358416 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B like protein-coding chr2-5517 chr2 149858274 149858484 + 10.3 0.000 non-coding (NR_145421, exon 2 of 5) non-coding (NR_145421, exon 2 of 5) 812 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr4-2062 chr4 14880851 14881061 + 10.3 0.000 intron (NR_126435, intron 1 of 6) intron (NR_126435, intron 1 of 6) 7213 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr3-2442 chr3 45200005 45200215 + 10.3 0.000 Intergenic Intergenic 26177 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr3-1930 chr3 189824723 189824933 + 10.3 0.000 intron (NM_003722, intron 4 of 13) intron (NM_003722, intron 4 of 13) -5094 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr7-2405 chr7 66139185 66139395 + 10.3 0.000 intron (NR_024548, intron 5 of 6) L1MEf|LINE|L1 24443 NM_014478 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr2-3390 chr2 26440816 26441026 + 10.3 0.000 intron (NM_145038, intron 8 of 16) L1ME4b|LINE|L1 37203 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr12-6528 chr12 110356551 110356761 + 10.3 0.000 Intergenic AluJr4|SINE|Alu 47074 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr22-1865 chr22 39836621 39836831 + 10.3 0.000 intron (NM_152512, intron 3 of 6) MSTA|LTR|ERVL-MaLR 57034 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr13-1305 chr13 83879890 83880100 + 10.3 0.000 exon (NM_052910, exon 1 of 1) exon (NM_052910, exon 1 of 1) 2398 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr3-2051 chr3 139448019 139448229 + 10.3 0.000 intron (NR_121609, intron 3 of 4) (CTTCTTC)n|Simple_repeat|Simple_repeat 28392 NM_004164 5948 Hs.655516 NM_004164 ENSG00000114113 RBP2 CRABP-II|CRBP2|CRBPII|RBPC2 retinol binding protein 2 protein-coding chr17-3284 chr17 44878858 44879068 + 10.3 0.000 intron (NM_001142605, intron 8 of 26) intron (NM_001142605, intron 8 of 26) 20405 NM_001258353 9343 Hs.151787 NM_004247 ENSG00000108883 EFTUD2 MFDGA|MFDM|SNRNP116|Snrp116|Snu114|U5-116KD elongation factor Tu GTP binding domain containing 2 protein-coding chr19-4616 chr19 13291229 13291439 + 10.3 0.000 intron (NM_023035, intron 19 of 46) MIR|SINE|MIR 140923 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr2-5529 chr2 157032156 157032366 + 10.3 0.000 Intergenic Intergenic -225444 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr12-6888 chr12 22030682 22030892 + 10.3 0.000 Intergenic LTR1B1|LTR|ERV1 -15387 NR_135117 55907 Hs.311346 NM_018686 ENSG00000111726 CMAS CSS cytidine monophosphate N-acetylneuraminic acid synthetase protein-coding chr13-1962 chr13 110220521 110220731 + 10.3 0.000 intron (NM_001845, intron 2 of 51) intron (NM_001845, intron 2 of 51) 86531 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr9-3963 chr9 136930116 136930326 + 10.3 0.000 Intergenic L1MD2|LINE|L1 14517 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr3-3165 chr3 174021823 174022033 + 10.3 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -101132 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr11-2532 chr11 76823583 76823793 + 10.3 0.000 Intergenic Intergenic 31936 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr1-9714 chr1 52890669 52890879 + 10.3 0.000 intron (NM_001307931, intron 12 of 12) AluJr|SINE|Alu 30966 NM_018281 55268 Hs.476319 NM_018281 ENSG00000121310 ECHDC2 - enoyl-CoA hydratase domain containing 2 protein-coding chr2-3643 chr2 144584060 144584270 + 10.3 0.000 Intergenic Intergenic -59721 NR_136320 105373656 Hs.734683 NR_136320 LOC105373656 - uncharacterized LOC105373656 ncRNA chr11-4197 chr11 61881487 61881697 + 10.3 0.000 intron (NM_021727, intron 1 of 11) intron (NM_021727, intron 1 of 11) -3314 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr9-2638 chr9 26100146 26100356 + 10.3 0.000 intron (NM_001004352, intron 3 of 6) intron (NM_001004352, intron 3 of 6) 33576 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr3-3098 chr3 138494427 138494637 + 10.3 0.000 3' UTR (NM_001288967, exon 14 of 14) 3' UTR (NM_001288967, exon 14 of 14) 59916 NM_031913 83850 Hs.477711 NM_031913 ENSG00000158220 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin 3 protein-coding chr14-1669 chr14 67247777 67247987 + 10.3 0.000 intron (NM_001256550, intron 1 of 14) L1M5|LINE|L1 6447 NM_022474 64398 Hs.652312 NM_022474 ENSG00000072415 MPP5 PALS1 membrane palmitoylated protein 5 protein-coding chr9-3380 chr9 127870170 127870380 + 10.3 0.000 promoter-TSS (NR_039819) promoter-TSS (NR_039819) -780 NR_039819 100616429 NR_039819 ENSG00000263979 MIR4672 - microRNA 4672 ncRNA chr1-6013 chr1 54998727 54998937 + 10.3 0.000 promoter-TSS (NM_057176) promoter-TSS (NM_057176) -101 NM_057176 7809 Hs.151291 NM_057176 ENSG00000162399 BSND BART|DFNB73 barttin CLCNK type accessory beta subunit protein-coding chr17-2324 chr17 49993007 49993217 + 10.3 0.000 intron (NM_005220, intron 2 of 2) intron (NM_005220, intron 2 of 2) 2112 NM_005220 1747 Hs.134194 NM_005220 ENSG00000064195 DLX3 AI4|TDO distal-less homeobox 3 protein-coding chr5-5654 chr5 158051050 158051260 + 10.3 0.000 Intergenic L2c|LINE|L2 -192010 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr9-2959 chr9 137169428 137169638 + 10.3 0.000 promoter-TSS (NR_037416) promoter-TSS (NR_037416) -263 NR_037416 100500811 NR_037416 ENSG00000263697 MIR3621 - microRNA 3621 ncRNA chr9-4901 chr9 6902755 6902965 + 10.3 0.000 intron (NR_148680, intron 8 of 21) intron (NR_148680, intron 8 of 21) 145510 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr13-3403 chr13 94683447 94683657 + 10.3 0.000 Intergenic L2a|LINE|L2 24934 NR_120417 101927248 NR_120417 LOC101927248 - uncharacterized LOC101927248 ncRNA chr1-8270 chr1 36554400 36554610 + 10.3 0.000 Intergenic Intergenic -71191 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr1-5938 chr1 24659600 24659810 + 10.3 0.000 intron (NR_159388, intron 10 of 18) MIRb|SINE|MIR 16126 NM_001366597 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr12-1833 chr12 23113894 23114104 + 10.3 0.000 Intergenic Intergenic -61637 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr22-1264 chr22 27749838 27750048 + 10.3 0.000 3' UTR (NM_002430, exon 2 of 2) 3' UTR (NM_002430, exon 2 of 2) 51813 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr5-5411 chr5 136001679 136001889 + 10.3 0.000 Intergenic Intergenic -27204 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding chr10-961 chr10 61662762 61662972 + 10.3 0.000 promoter-TSS (NM_001366909) promoter-TSS (NM_001366909) -62 NM_001366908 219621 Hs.673160 NM_173554 ENSG00000183346 CABCOCO1 C10orf107 ciliary associated calcium binding coiled-coil 1 protein-coding chr17-4331 chr17 1929992 1930202 + 10.3 0.000 Intergenic Intergenic -87619 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr22-2135 chr22 38010299 38010509 + 10.3 0.000 intron (NM_001301130, intron 5 of 5) L1ME1|LINE|L1 21610 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr17-2761 chr17 82303801 82304011 + 10.3 0.000 Intergenic Intergenic -11092 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr14-1942 chr14 23674202 23674412 + 10.3 0.000 Intergenic MLT2D|LTR|ERVL 37943 NM_005794 10202 Hs.272499 NM_005794 ENSG00000100867 DHRS2 HEP27|SDR25C1 dehydrogenase/reductase 2 protein-coding chr20-2429 chr20 23851895 23852105 + 10.3 0.000 Intergenic Arthur1|DNA|hAT-Tip100 -25271 NM_001322 1470 Hs.669305 NM_001322 ENSG00000170369 CST2 - cystatin SA protein-coding chr15-4941 chr15 78111580 78111790 + 10.3 0.000 intron (NM_001271888, intron 1 of 4) MIRb|SINE|MIR 19100 NM_001101404 646892 Hs.569511 NM_001101404 ENSG00000183476 SH2D7 - SH2 domain containing 7 protein-coding chr2-10752 chr2 36737487 36737697 + 10.3 0.000 intron (NM_001177969, intron 3 of 14) intron (NM_001177969, intron 3 of 14) 40885 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr16-3378 chr16 63499980 63500190 + 10.3 0.000 Intergenic LTR16C|LTR|ERVL -1463647 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr7-6810 chr7 32256040 32256250 + 10.3 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 43183 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr5-3553 chr5 41708221 41708431 + 10.3 0.000 Intergenic L1PA7|LINE|L1 135331 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr18-483 chr18 362123 362333 + 10.3 0.000 intron (NM_130386, intron 2 of 9) intron (NM_130386, intron 2 of 9) -94181 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr19-5169 chr19 7689696 7689906 + 10.3 0.000 intron (NM_002002, intron 10 of 10) AluSx1|SINE|Alu 8968 NM_001042461 126003 Hs.432413 NM_174894 ENSG00000181029 TRAPPC5 TRS31 trafficking protein particle complex 5 protein-coding chr6-1744 chr6 44387954 44388164 + 10.3 0.000 intron (NM_001253, intron 1 of 15) intron (NM_001253, intron 1 of 15) 353 NM_001253 988 Hs.485471 NM_001253 ENSG00000096401 CDC5L CDC5|CDC5-LIKE|CEF1|PCDC5RP|dJ319D22.1 cell division cycle 5 like protein-coding chr1-10996 chr1 217665478 217665688 + 10.3 0.000 intron (NM_138796, intron 3 of 10) intron (NM_138796, intron 3 of 10) 34239 NM_138796 128153 Hs.171130 NM_138796 ENSG00000162814 SPATA17 IQCH|MSRG-11|MSRG11 spermatogenesis associated 17 protein-coding chr9-3773 chr9 125807150 125807360 + 10.3 0.000 intron (NR_024122, intron 2 of 7) AluSz6|SINE|Alu 59072 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr9-4285 chr9 112673047 112673257 + 10.3 0.000 Intergenic L1PA11|LINE|L1 44965 NR_138054 58493 Hs.658575 NM_021218 ENSG00000148153 INIP C9orf80|HSPC043|MISE|SOSSC|SSBIP1|hSSBIP1 INTS3 and NABP interacting protein protein-coding chr5-4144 chr5 89709192 89709402 + 10.3 0.000 Intergenic L2c|LINE|L2 307423 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chrX-1620 chrX 112961923 112962133 + 10.3 0.000 Intergenic L2c|LINE|L2 -80699 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr20-1122 chr20 31836230 31836440 + 10.3 0.000 Intergenic Intergenic 9269 NM_004118 2307 Hs.516971 NM_004118 ENSG00000179772 FOXS1 FKHL18|FREAC10 forkhead box S1 protein-coding chr10-2542 chr10 60757687 60757897 + 10.3 0.000 Intergenic Intergenic -20539 NM_001170406 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr3-2732 chr3 123085546 123085756 + 10.3 0.000 intron (NM_006810, intron 1 of 16) intron (NM_006810, intron 1 of 16) 18626 NM_006810 10954 Hs.477352 NM_006810 ENSG00000065485 PDIA5 PDIR protein disulfide isomerase family A member 5 protein-coding chr18-740 chr18 57780834 57781044 + 10.3 0.000 intron (NM_005603, intron 1 of 27) intron (NM_005603, intron 1 of 27) 22376 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chrX-1672 chrX 153873449 153873659 + 10.3 0.000 intron (NM_001278116, intron 2 of 28) intron (NM_001278116, intron 2 of 28) 2390 NM_001143963 3897 Hs.522818 NM_000425 ENSG00000198910 L1CAM CAML1|CD171|HSAS|HSAS1|MASA|MIC5|N-CAM-L1|N-CAML1|NCAM-L1|S10|SPG1 L1 cell adhesion molecule protein-coding chr19-2008 chr19 35545440 35545650 + 10.3 0.000 promoter-TSS (NM_001242597) promoter-TSS (NM_001242597) -81 NM_032635 10430 Hs.9234 NM_032635 ENSG00000105677 TMEM147 NIFIE14 transmembrane protein 147 protein-coding chr14-1606 chr14 100295438 100295648 + 10.3 0.000 intron (NM_152333, intron 1 of 2) intron (NM_152333, intron 1 of 2) 10901 NM_001291813 123096 Hs.578109 NM_152333 ENSG00000197119 SLC25A29 C14orf69|CACL|ORNT3 solute carrier family 25 member 29 protein-coding chr3-2570 chr3 108472313 108472523 + 10.3 0.000 intron (NM_014981, intron 13 of 41) intron (NM_014981, intron 13 of 41) 56904 NM_014981 22989 Hs.731060 NM_014981 ENSG00000144821 MYH15 - myosin heavy chain 15 protein-coding chr10-4411 chr10 61513007 61513217 + 10.3 0.000 Intergenic L1M5|LINE|L1 33071 NR_120645 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr17-4209 chr17 32805082 32805292 + 10.3 0.000 intron (NM_015194, intron 1 of 21) MLT1A0|LTR|ERVL-MaLR 71937 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr14-2017 chr14 58978327 58978537 + 10.3 0.000 intron (NR_110547, intron 4 of 5) intron (NR_110547, intron 4 of 5) 150144 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr11-6039 chr11 28481151 28481361 + 10.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -3708 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr16-3302 chr16 89621123 89621333 + 10.3 0.000 intron (NM_004413, intron 1 of 10) intron (NM_004413, intron 1 of 10) 631 NM_004413 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chrX-1301 chrX 118877346 118877556 + 10.3 0.000 intron (NR_110393, intron 6 of 6) L2a|LINE|L2 37895 NR_110393 101928287 Hs.496647 NR_110393 ENSG00000203650 LINC01285 - long intergenic non-protein coding RNA 1285 ncRNA chr4-4588 chr4 76111353 76111563 + 10.3 0.000 intron (NM_001179, intron 10 of 10) Tigger2b_Pri|DNA|TcMar-Tigger 36763 NM_001179 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr19-3178 chr19 44444322 44444532 + 10.3 0.000 intron (NM_001278510, intron 2 of 5) intron (NM_001278510, intron 2 of 5) 4045 NM_014518 7772 Hs.709348 NM_014518 ENSG00000278318 ZNF229 - zinc finger protein 229 protein-coding chr20-2703 chr20 47416901 47417111 + 10.3 0.000 Intergenic Intergenic -4862 NR_146496 102723442 NR_146494 LINC01754 - long intergenic non-protein coding RNA 1754 ncRNA chr1-10635 chr1 180458518 180458728 + 10.3 0.000 intron (NM_032360, intron 3 of 7) intron (NM_032360, intron 3 of 7) -20233 NR_036067 100423032 NR_036067 ENSG00000265435 MIR3121 mir-3121 microRNA 3121 ncRNA chr6-3334 chr6 6327811 6328021 + 10.3 0.000 Intergenic Intergenic -7225 NM_000129 2162 Hs.335513 NM_000129 ENSG00000124491 F13A1 F13A coagulation factor XIII A chain protein-coding chr3-4745 chr3 81240186 81240396 + 10.3 0.000 Intergenic Intergenic 246423 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr16-2000 chr16 978165 978375 + 10.3 0.000 intron (NR_036442, intron 3 of 3) (AC)n|Simple_repeat|Simple_repeat 3343 NM_001352019 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr11-5978 chr11 19080100 19080310 + 10.3 0.000 Intergenic MIRc|SINE|MIR -19488 NM_054030 117194 Hs.350566 NM_054030 ENSG00000183695 MRGPRX2 MGRG3|MRGX2 MAS related GPR family member X2 protein-coding chr14-2815 chr14 23079953 23080163 + 10.3 0.000 exon (NM_001164815, exon 5 of 18) exon (NM_001164815, exon 5 of 18) -8489 NM_001164816 22985 Hs.124490 NM_014977 ENSG00000100813 ACIN1 ACINUS|ACN|fSAP152 apoptotic chromatin condensation inducer 1 protein-coding chrX-703 chrX 75823976 75824186 + 10.3 0.000 Intergenic L1P4e|LINE|L1 -38827 NM_138703 139599 Hs.356869 NM_138703 ENSG00000186675 MAGEE2 HCA3 MAGE family member E2 protein-coding chr4-6094 chr4 10288157 10288367 + 10.3 0.000 Intergenic Intergenic 169164 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr19-3415 chr19 17326074 17326284 + 10.3 0.000 intron (NM_020959, intron 16 of 17) intron (NM_020959, intron 16 of 17) 8676 NM_020959 57719 Hs.590990 NM_020959 ENSG00000074855 ANO8 KIAA1623|TMEM16H anoctamin 8 protein-coding chr20-1856 chr20 32448352 32448562 + 10.3 0.000 intron (NM_001256798, intron 10 of 10) intron (NM_001256798, intron 10 of 10) 35033 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr22-1940 chr22 46863880 46864090 + 10.3 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 52057 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr9-4576 chr9 92793300 92793510 + 10.3 0.000 Intergenic Intergenic 14682 NR_136301 101929748 Hs.551296 NR_136301 LOC101929748 - uncharacterized LOC101929748 ncRNA chrX-442 chrX 72394726 72394936 + 10.3 0.000 intron (NR_051952, intron 8 of 9) intron (NR_051952, intron 8 of 9) -87674 NM_001144886 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr15-2590 chr15 61619999 61620209 + 10.3 0.000 Intergenic Intergenic -109814 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr1-5528 chr1 203557840 203558050 + 10.3 0.000 Intergenic Intergenic 63792 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr13-1696 chr13 81927637 81927847 + 10.3 0.000 Intergenic MER83|LTR|ERV1 -700759 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr2-3639 chr2 137969252 137969462 + 10.3 0.000 intron (NM_001024075, intron 1 of 2) L2|LINE|L2 4884 NM_006895 3176 Hs.42151 NM_006895 ENSG00000150540 HNMT HMT|HNMT-S1|HNMT-S2|MRT51 histamine N-methyltransferase protein-coding chr5-2363 chr5 79925109 79925319 + 10.3 0.000 Intergenic Intergenic -11365 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr12-1837 chr12 28568125 28568335 + 10.3 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -377492 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr15-1596 chr15 77706784 77706994 + 10.3 0.000 intron (NM_001301192, intron 2 of 4) intron (NM_001301192, intron 2 of 4) 618 NM_001301198 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr10-3030 chr10 114698597 114698807 + 10.3 0.000 intron (NM_001322886, intron 1 of 20) HAL1ME|LINE|L1 -13699 NM_001322882 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr11-5345 chr11 62958725 62958935 + 10.3 0.000 Intergenic Intergenic 26137 NM_153277 9356 Hs.369252 NM_004790 ENSG00000197901 SLC22A6 HOAT1|OAT1|PAHT|ROAT1 solute carrier family 22 member 6 protein-coding chr10-3578 chr10 82704122 82704332 + 10.3 0.000 intron (NR_163253, intron 3 of 10) intron (NR_163253, intron 3 of 10) -471307 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr12-5301 chr12 111371104 111371314 + 10.3 0.000 Intergenic L2a|LINE|L2 -2114 NM_001177997 144717 Hs.173088 NM_144671 ENSG00000198324 PHETA1 FAM109A|IPIP27A|SES1 PH domain containing endocytic trafficking adaptor 1 protein-coding chr9-1251 chr9 36594800 36595010 + 10.3 0.000 intron (NM_001256689, intron 4 of 16) intron (NM_001256689, intron 4 of 16) 22010 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr2-9236 chr2 218870965 218871175 + 10.3 0.000 exon (NM_006522, exon 2 of 4) exon (NM_006522, exon 2 of 4) -9782 NM_025216 80326 Hs.121540 NM_025216 ENSG00000135925 WNT10A OODD|SSPS|STHAG4 Wnt family member 10A protein-coding chr9-3216 chr9 134242762 134242972 + 10.3 0.000 Intergenic Intergenic 52530 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr5-2591 chr5 93058396 93058606 + 10.3 0.000 Intergenic Intergenic 512842 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr14-5113 chr14 89221048 89221258 + 10.3 0.000 intron (NM_001085471, intron 4 of 6) intron (NM_001085471, intron 4 of 6) 196080 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr16-4574 chr16 67285395 67285605 + 10.3 0.000 exon (NM_001129728, exon 14 of 22) exon (NM_001129728, exon 14 of 22) 5968 NM_001129729 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding chr5-7891 chr5 75188051 75188261 + 10.3 0.000 intron (NM_001164443, intron 10 of 24) intron (NM_001164443, intron 10 of 24) 48722 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr10-5439 chr10 78305930 78306140 + 10.3 0.000 Intergenic MER5A1|DNA|hAT-Charlie 38693 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr11-5042 chr11 94776687 94776897 + 10.3 0.000 intron (NM_001301007, intron 1 of 11) intron (NM_001301007, intron 1 of 11) 8436 NM_001301007 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr12-4185 chr12 93938911 93939121 + 10.3 0.000 intron (NR_135017, intron 1 of 2) intron (NR_135017, intron 1 of 2) 4590 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr22-1788 chr22 30016652 30016862 + 10.3 0.000 intron (NM_153051, intron 15 of 18) intron (NM_153051, intron 15 of 18) 9708 NR_106876 102466742 NR_106876 ENSG00000275818 MIR6818 hsa-mir-6818 microRNA 6818 ncRNA chr6-5838 chr6 34236872 34237082 + 10.3 0.000 5' UTR (NM_001319082, exon 1 of 6) intron (NM_001319081, intron 1 of 4) 104 NM_145899 3159 Hs.518805 NM_002131 ENSG00000137309 HMGA1 HMG-R|HMGA1A|HMGIY high mobility group AT-hook 1 protein-coding chr15-1654 chr15 99306735 99306945 + 10.3 0.000 intron (NM_001321677, intron 5 of 8) intron (NM_001321677, intron 5 of 8) 49315 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr12-2665 chr12 41565318 41565528 + 10.3 0.000 intron (NM_001164595, intron 8 of 9) intron (NM_001164595, intron 8 of 9) 127684 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr18-2455 chr18 35816887 35817097 + 10.3 0.000 Intergenic AluJo|SINE|Alu 87934 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr22-3227 chr22 41230475 41230685 + 10.3 0.000 3' UTR (NM_031488, exon 17 of 17) 3' UTR (NM_031488, exon 17 of 17) 10351 NM_138481 150356 Hs.344488 NM_138481 ENSG00000100399 CHADL SLRR4B chondroadherin like protein-coding chr3-5281 chr3 121644912 121645122 + 10.3 0.000 intron (NM_001292041, intron 4 of 12) intron (NM_001292041, intron 4 of 12) 15886 NM_001292041 3059 Hs.14601 NM_005335 ENSG00000180353 HCLS1 CTTNL|HS1|lckBP1|p75 hematopoietic cell-specific Lyn substrate 1 protein-coding chr10-5385 chr10 74293985 74294195 + 10.3 0.000 intron (NM_001369124, intron 3 of 9) L1ME3A|LINE|L1 117327 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr6-4539 chr6 40332191 40332401 + 10.3 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 23710 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr1-5576 chr1 1869708 1869918 + 10.3 0.000 intron (NM_001282538, intron 1 of 9) intron (NM_001282538, intron 1 of 9) 21274 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr15-4589 chr15 59736056 59736266 + 10.3 0.000 Intergenic Intergenic -46841 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr2-6984 chr2 134954301 134954511 + 10.3 0.000 exon (NM_058241, exon 9 of 9) exon (NM_058241, exon 9 of 9) 35584 NR_135468 905 Hs.744115 NM_001241 ENSG00000082258 CCNT2 CYCT2 cyclin T2 protein-coding chr12-4874 chr12 62803171 62803381 + 10.3 0.000 intron (NM_020700, intron 2 of 9) intron (NM_020700, intron 2 of 9) 131874 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chrX-2319 chrX 55814436 55814646 + 10.3 0.000 Intergenic MER52A|LTR|ERV1 -93582 NM_001324105 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr2-13193 chr2 121160542 121160752 + 10.3 0.000 Intergenic MER117|DNA|hAT-Charlie 124555 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr1-4905 chr1 39179220 39179430 + 10.3 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 95158 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr12-7459 chr12 63667565 63667775 + 10.3 0.000 intron (NM_173812, intron 1 of 21) intron (NM_173812, intron 1 of 21) 823 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding chr18-796 chr18 58117890 58118100 + 10.3 0.000 intron (NM_001144964, intron 1 of 30) intron (NM_001144964, intron 1 of 30) -31325 NM_001144969 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr6-4737 chr6 67521325 67521535 + 10.3 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -533921 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr11-5989 chr11 20179918 20180128 + 10.3 0.000 Intergenic L2a|LINE|L2 -19548 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr1-7178 chr1 209607318 209607528 + 10.3 0.000 intron (NM_020439, intron 6 of 12) L2b|LINE|L2 16087 NR_036213 100422894 NR_036213 ENSG00000283876 MIR4260 - microRNA 4260 ncRNA chr15-2015 chr15 47756787 47756997 + 10.3 0.000 intron (NM_153618, intron 1 of 18) intron (NM_153618, intron 1 of 18) 38403 NM_153619 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr9-3057 chr9 136614823 136615033 + 10.3 0.000 non-coding (NR_135288, exon 1 of 3) non-coding (NR_135288, exon 1 of 3) 2253 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr14-1899 chr14 102279730 102279940 + 10.3 0.000 intron (NM_001353828, intron 2 of 12) intron (NM_001353828, intron 2 of 12) 25329 NM_001353831 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr1-3531 chr1 203086915 203087125 + 10.3 0.000 non-coding (NR_160550, exon 3 of 3) non-coding (NR_160550, exon 3 of 3) -1008 NM_002479 4656 Hs.2830 NM_002479 ENSG00000122180 MYOG MYF4|bHLHc3|myf-4 myogenin protein-coding chr4-1916 chr4 53686728 53686938 + 10.3 0.000 Intergenic L2|LINE|L2 -9068 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr16-5512 chr16 19643651 19643861 + 10.3 0.000 intron (NM_001300743, intron 20 of 27) AluSq2|SINE|Alu -72700 NM_001305122 124152 Hs.460217 NM_153208 ENSG00000174628 IQCK - IQ motif containing K protein-coding chrX-593 chrX 119067033 119067243 + 10.3 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 83441 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr15-4080 chr15 71282251 71282461 + 10.3 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -93297 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr13-2548 chr13 65037125 65037335 + 10.3 0.000 Intergenic Intergenic -828817 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr8-6334 chr8 50532470 50532680 + 10.3 0.000 intron (NR_135797, intron 10 of 20) intron (NR_135797, intron 10 of 20) 368444 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr9-3203 chr9 132194478 132194688 + 10.3 0.000 intron (NM_032536, intron 2 of 7) intron (NM_032536, intron 2 of 7) 32525 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr5-7759 chr5 61397805 61398015 + 10.3 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 65652 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr5-3535 chr5 16360340 16360550 + 10.3 0.000 Intergenic Intergenic 80657 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA chr6-7822 chr6 101292640 101292850 + 10.3 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -106240 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr9-7901 chr9 88528582 88528792 + 10.3 0.000 Intergenic Intergenic -6414 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr20-1677 chr20 34263040 34263250 + 10.3 0.000 intron (NM_001672, intron 2 of 2) intron (NM_001672, intron 2 of 2) 2780 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr7-8012 chr7 17423022 17423232 + 10.3 0.000 intron (NR_110015, intron 1 of 2) intron (NR_110015, intron 1 of 2) 48210 NR_110015 102659288 Hs.559488 NR_110014 KCCAT333 - renal clear cell carcinoma-associated transcript 333 ncRNA chr15-2342 chr15 33638553 33638763 + 10.3 0.000 intron (NM_001243996, intron 27 of 102) MER5A1|DNA|hAT-Charlie 327691 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr6-2806 chr6 151247570 151247780 + 10.3 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 7708 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr5-3088 chr5 38974309 38974519 + 10.3 0.000 intron (NM_001285439, intron 10 of 38) intron (NM_001285439, intron 10 of 38) 99985 NM_001285440 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr19-2317 chr19 16829237 16829447 + 10.3 0.000 promoter-TSS (NM_015260) promoter-TSS (NM_015260) -56 NM_015260 23309 Hs.13999 NM_015260 ENSG00000127511 SIN3B - SIN3 transcription regulator family member B protein-coding chr12-2345 chr12 6180418 6180628 + 10.3 0.000 Intergenic Intergenic -19423 NM_001330312 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr2-5550 chr2 164145853 164146063 + 10.3 0.000 Intergenic LTR85c|LTR|Gypsy? -409950 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr15-2933 chr15 46842330 46842540 + 10.3 0.000 Intergenic Intergenic -341654 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr5-1581 chr5 176845137 176845347 + 10.3 0.000 intron (NM_133369, intron 1 of 14) intron (NM_133369, intron 1 of 14) 34683 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 netrin receptor A protein-coding chr8-4930 chr8 102577807 102578017 + 10.3 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 26323 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr20-2156 chr20 39632709 39632919 + 10.3 0.000 Intergenic L3|LINE|CR1 -371647 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr11-1102 chr11 68779653 68779863 + 10.3 0.000 intron (NM_001031847, intron 12 of 18) AluJb|SINE|Alu -28238 NM_001039656 9633 Hs.145932 NM_004923 ENSG00000132749 TESMIN CXCDC2|MTL5|MTLT testis expressed metallothionein like protein protein-coding chr3-2197 chr3 12832537 12832747 + 10.3 0.000 intron (NM_001162499, intron 14 of 14) MER46C|DNA|TcMar-Tigger 7808 NM_001007074 6161 Hs.265174 NM_000994 ENSG00000144713 RPL32 L32|PP9932 ribosomal protein L32 protein-coding chr17-6241 chr17 21190871 21191081 + 10.3 0.000 exon (NM_001330159, exon 7 of 7) exon (NM_001330159, exon 7 of 7) 23619 NR_024547 8834 Hs.592945 NM_003876 ENSG00000178307 TMEM11 C17orf35|PM1|PMI transmembrane protein 11 protein-coding chr7-3774 chr7 83405574 83405784 + 10.3 0.000 intron (NM_001178129, intron 8 of 16) intron (NM_001178129, intron 8 of 16) 235752 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr5-4738 chr5 44999639 44999849 + 10.3 0.000 Intergenic LTR12F|LTR|ERV1 190797 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr5-1172 chr5 16742099 16742309 + 10.3 0.000 intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -125146 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr1-6842 chr1 101043779 101043989 + 10.3 0.000 intron (NR_109849, intron 1 of 4) L2c|LINE|L2 18038 NR_109849 102606465 Hs.593669 NR_109849 LOC102606465 - uncharacterized LOC102606465 ncRNA chr13-824 chr13 43719129 43719339 + 10.3 0.000 intron (NM_001347969, intron 1 of 16) intron (NM_001347969, intron 1 of 16) 67738 NM_001347964 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr9-6024 chr9 135718298 135718508 + 10.3 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 16218 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr7-3451 chr7 1269821 1270031 + 10.3 0.000 Intergenic Intergenic 37054 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr9-3493 chr9 16385914 16386124 + 10.3 0.000 Intergenic L2a|LINE|L2 -109706 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr1-6237 chr1 224524670 224524880 + 10.3 0.000 intron (NM_001322304, intron 2 of 6) intron (NM_001322304, intron 2 of 6) 89926 NR_136294 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr22-3354 chr22 24989482 24989692 + 10.3 0.000 Intergenic Intergenic -38387 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding chr10-5864 chr10 115031574 115031784 + 10.3 0.000 Intergenic L1P4|LINE|L1 37022 NR_120677 102724589 NR_120677 ENSG00000236799 LINC02626 - long intergenic non-protein coding RNA 2626 ncRNA chrX-4252 chrX 39633452 39633662 + 10.3 0.000 Intergenic Intergenic -27659 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr17-3958 chr17 63438475 63438685 + 10.3 0.000 intron (NM_001915, intron 1 of 5) intron (NM_001915, intron 1 of 5) 1687 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr3-4262 chr3 148379804 148380014 + 10.3 0.000 intron (NR_146712, intron 4 of 4) intron (NR_146712, intron 4 of 4) 99018 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr2-3436 chr2 101063893 101064103 + 10.3 0.000 intron (NM_001102426, intron 2 of 19) intron (NM_001102426, intron 2 of 19) 61709 NM_000993 6160 Hs.469473 NM_000993 ENSG00000071082 RPL31 L31 ribosomal protein L31 protein-coding chr14-933 chr14 22848305 22848515 + 10.3 0.000 TTS (NM_004995) TTS (NM_004995) 11825 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr2-5486 chr2 136010091 136010301 + 10.3 0.000 Intergenic Intergenic -24512 NM_001293312 1615 Hs.503787 NM_001349 ENSG00000115866 DARS HBSL|aspRS aspartyl-tRNA synthetase protein-coding chr13-651 chr13 33676619 33676829 + 10.3 0.000 promoter-TSS (NM_001243476) promoter-TSS (NM_001243476) 70 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr18-1122 chr18 261738 261948 + 10.3 0.000 intron (NM_005131, intron 4 of 20) MER5A|DNA|hAT-Charlie 6204 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr1-4148 chr1 9270817 9271027 + 10.3 0.000 3' UTR (NM_004285, exon 5 of 5) 3' UTR (NM_004285, exon 5 of 5) -21972 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr17-5267 chr17 19776486 19776696 + 10.3 0.000 intron (NM_014683, intron 26 of 26) intron (NM_014683, intron 26 of 26) -28293 NM_000691 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr1-10383 chr1 156174527 156174737 + 10.3 0.000 intron (NM_001370567, intron 10 of 13) L2a|LINE|L2 -19300 NR_104412 9673 Hs.532375 NM_014655 ENSG00000160785 SLC25A44 - solute carrier family 25 member 44 protein-coding chr7-5776 chr7 76797868 76798078 + 10.3 0.000 Intergenic L2c|LINE|L2 -170670 NM_152992 22932 Hs.488877 NM_012230 ENSG00000146707 POMZP3 POM-ZP3|POM121 POM121 and ZP3 fusion protein-coding chr19-4322 chr19 1542046 1542256 + 10.3 0.000 Intergenic Intergenic 18074 NM_001243079 126520 Hs.195352 NM_001011716 ENSG00000185988 PLK5 PLK-5|PLK5P|SgK384ps polo like kinase 5 protein-coding chr3-2993 chr3 98906302 98906512 + 10.3 0.000 Intergenic Intergenic -4712 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr5-2006 chr5 10330180 10330390 + 10.3 0.000 Intergenic Intergenic -22383 NM_138809 134147 Hs.192586 NM_138809 ENSG00000164237 CMBL JS-1 carboxymethylenebutenolidase homolog protein-coding chr3-2437 chr3 33096451 33096661 + 10.3 0.000 intron (NM_001039770, intron 1 of 1) intron (NM_001039770, intron 1 of 1) 276 NM_001079811 2720 Hs.443031 NM_000404 ENSG00000170266 GLB1 EBP|ELNR1|MPS4B galactosidase beta 1 protein-coding chr4-2429 chr4 140925876 140926086 + 10.3 0.000 exon (NM_020724, exon 5 of 7) exon (NM_020724, exon 5 of 7) -169596 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr19-2834 chr19 1051920 1052130 + 10.3 0.000 exon (NM_019112, exon 22 of 47) exon (NM_019112, exon 22 of 47) 11922 NM_019112 10347 Hs.134514 NM_019112 ENSG00000064687 ABCA7 ABCA-SSN|ABCX|AD9 ATP binding cassette subfamily A member 7 protein-coding chr15-2718 chr15 93309714 93309924 + 10.3 0.000 Intergenic AluJb|SINE|Alu 103753 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr10-4102 chr10 67855709 67855919 + 10.3 0.000 Intergenic Intergenic -17626 NM_021800 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr14-2883 chr14 34453151 34453361 + 10.3 0.000 intron (NM_138288, intron 1 of 1) Tigger2b_Pri|DNA|TcMar-Tigger 8984 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr2-10185 chr2 96440017 96440227 + 10.3 0.000 Intergenic LTR24C|LTR|ERV1 65235 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr7-5855 chr7 89813521 89813731 + 10.3 0.000 Intergenic Intergenic -305774 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr19-3379 chr19 12851997 12852207 + 10.3 0.000 promoter-TSS (NR_106852) promoter-TSS (NR_106852) -158 NR_106852 102466196 NR_106852 ENSG00000276181 MIR6794 hsa-mir-6794 microRNA 6794 ncRNA chr7-8162 chr7 29371454 29371664 + 10.3 0.000 intron (NM_001293072, intron 3 of 12) intron (NM_001293072, intron 3 of 12) -108153 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr10-4566 chr10 104617817 104618027 + 10.3 0.000 Intergenic MamRep605|LTR?|LTR? -23368 NM_014978 22986 Hs.671950 NM_014978 ENSG00000156395 SORCS3 SORCS sortilin related VPS10 domain containing receptor 3 protein-coding chr19-4316 chr19 1387323 1387533 + 10.3 0.000 intron (NM_024407, intron 1 of 7) L2b|LINE|L2 3521 NM_024407 374291 Hs.211914 NM_024407 ENSG00000115286 NDUFS7 CI-20|CI-20KD|MC1DN3|MY017|PSST NADH:ubiquinone oxidoreductase core subunit S7 protein-coding chr2-4774 chr2 29948320 29948530 + 10.3 0.000 Intergenic Intergenic -26839 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr6-2485 chr6 77368734 77368944 + 10.3 0.000 Intergenic LTR1A2|LTR|ERV1 95183 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr2-4823 chr2 62364170 62364380 + 10.3 0.000 Intergenic AluSx1|SINE|Alu 141920 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr2-9266 chr2 220619358 220619568 + 10.3 0.000 Intergenic Intergenic -712898 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr1-6217 chr1 213485724 213485934 + 10.3 0.000 Intergenic L2c|LINE|L2 434588 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr17-3983 chr17 66310636 66310846 + 10.3 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 8128 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr1-8042 chr1 240499144 240499354 + 10.3 0.000 intron (NM_022469, intron 1 of 1) intron (NM_022469, intron 1 of 1) 112906 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr1-5063 chr1 97396748 97396958 + 10.3 0.000 intron (NM_000110, intron 14 of 22) L2b|LINE|L2 300930 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr4-1934 chr4 95460623 95460833 + 10.3 0.000 intron (NM_003728, intron 1 of 15) THE1B|LTR|ERVL-MaLR 88245 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr9-1873 chr9 95284180 95284390 + 10.3 0.000 intron (NM_001243744, intron 1 of 13) intron (NM_001243744, intron 1 of 13) 32969 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr10-2972 chr10 71531039 71531249 + 10.3 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -19224 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr5-4185 chr5 110001221 110001431 + 10.3 0.000 Intergenic Intergenic 118144 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr14-1962 chr14 35386642 35386852 + 10.3 0.000 Intergenic LTR9|LTR|ERV1 18007 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr5-3792 chr5 77630319 77630529 + 10.3 0.000 exon (NM_032109, exon 3 of 3) exon (NM_032109, exon 3 of 3) 8273 NM_032109 23440 Hs.202247 NM_032109 ENSG00000171540 OTP - orthopedia homeobox protein-coding chr8-6675 chr8 80834018 80834228 + 10.3 0.000 intron (NM_001033723, intron 1 of 8) AluJb|SINE|Alu 40345 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr2-1832 chr2 142874333 142874543 + 10.3 0.000 Intergenic Intergenic -3226 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr10-3239 chr10 113382242 113382452 + 10.3 0.000 Intergenic Intergenic -168484 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr3-4315 chr3 171088324 171088534 + 10.3 0.000 intron (NM_001161563, intron 22 of 31) AluSg|SINE|Alu 18330 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr1-8715 chr1 229046663 229046873 + 10.3 0.000 Intergenic Intergenic 128033 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr10-2533 chr10 52451921 52452131 + 10.3 0.000 intron (NR_120641, intron 3 of 3) intron (NR_120641, intron 3 of 3) 3246 NR_120642 101928687 Hs.380362 NR_120641 ENSG00000231131 LNCAROD A-ROD|LINC01468|lnc-MBL2-4 lncRNA activating regulator of DKK1 ncRNA chr1-15675 chr1 166742912 166743122 + 10.3 0.000 Intergenic Intergenic -96458 NM_001314014 57645 Hs.432752 NM_017542 ENSG00000143157 POGK BASS2|KRBOX2|LST003 pogo transposable element derived with KRAB domain protein-coding chr2-2678 chr2 239947267 239947477 + 10.3 0.000 intron (NR_136158, intron 7 of 10) intron (NR_136158, intron 7 of 10) -4278 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr4-7230 chr4 43703858 43704068 + 10.3 0.000 Intergenic L1M1|LINE|L1 -211420 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr7-6186 chr7 129171060 129171270 + 10.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -17468 NM_005631 6608 Hs.437846 NM_005631 ENSG00000128602 SMO CRJS|FZD11|Gx|SMOH smoothened, frizzled class receptor protein-coding chr1-4043 chr1 202615287 202615497 + 10.3 0.000 intron (NM_177402, intron 1 of 8) L2a|LINE|L2 28061 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr15-1347 chr15 50166381 50166591 + 10.3 0.000 Intergenic Intergenic -15710 NM_001159629 11001 Hs.11729 NM_003645 ENSG00000140284 SLC27A2 ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1 solute carrier family 27 member 2 protein-coding chr20-1878 chr20 44812794 44813004 + 10.3 0.000 Intergenic L2a|LINE|L2 -2353 NM_001205317 140730 Hs.517065 NM_182970 ENSG00000101098 RIMS4 C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma regulating synaptic membrane exocytosis 4 protein-coding chr11-4094 chr11 32659762 32659972 + 10.3 0.000 intron (NM_001008391, intron 9 of 17) LFSINE_Vert|SINE|tRNA 76036 NM_006360 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr12-3504 chr12 124788236 124788446 + 10.3 0.000 intron (NM_001367987, intron 7 of 9) MLT1J|LTR|ERVL-MaLR 51330 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr12-2486 chr12 75525143 75525353 + 10.3 0.000 Intergenic Intergenic -13639 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr4-2906 chr4 82784689 82784899 + 10.3 0.000 intron (NM_001037582, intron 1 of 4) MamRep38|DNA|hAT 14002 NM_001037582 79966 Hs.379191 NM_024906 ENSG00000145284 SCD5 ACOD4|FADS4|HSCD5|SCD2|SCD4 stearoyl-CoA desaturase 5 protein-coding chr21-1967 chr21 46291312 46291522 + 10.3 0.000 exon (NM_001006114, exon 3 of 3) exon (NM_001006114, exon 3 of 3) 5075 NM_058181 54059 Hs.474066 NM_058181 ENSG00000182362 YBEY C21orf57 ybeY metalloendoribonuclease protein-coding chr10-2909 chr10 132132773 132132983 + 10.3 0.000 intron (NM_001323089, intron 3 of 22) intron (NM_001323089, intron 3 of 22) -54070 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr14-2150 chr14 88481995 88482205 + 10.3 0.000 intron (NM_007039, intron 12 of 18) intron (NM_007039, intron 12 of 18) 72907 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr7-3375 chr7 102890834 102891044 + 10.3 0.000 intron (NR_105043, intron 12 of 20) intron (NR_105043, intron 12 of 20) -22061 NM_001031692 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr6-2083 chr6 141281249 141281459 + 10.3 0.000 Intergenic Intergenic 597540 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chrX-5347 chrX 148545690 148545900 + 10.3 0.000 intron (NM_001169124, intron 1 of 19) MER5A|DNA|hAT-Charlie 45178 NM_001169124 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr3-2776 chr3 178705921 178706131 + 10.3 0.000 intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 147176 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr3-2541 chr3 49683712 49683922 + 10.3 0.000 TTS (NR_146060) TTS (NR_146060) 4946 NR_146060 4485 Hs.349110 NM_020998 ENSG00000173531 MST1 D3F15S2|DNF15S2|HGFL|MSP|NF15S2 macrophage stimulating 1 protein-coding chr10-1323 chr10 86711947 86712157 + 10.3 0.000 intron (NM_001368066, intron 10 of 14) CpG 43488 NM_001080116 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr3-6083 chr3 52216998 52217208 + 10.3 0.000 Intergenic Intergenic 9060 NM_017442 54106 Hs.87968 NM_017442 ENSG00000239732 TLR9 CD289 toll like receptor 9 protein-coding chr14-3104 chr14 65213412 65213622 + 10.3 0.000 non-coding (NR_103769, exon 4 of 4) non-coding (NR_103769, exon 4 of 4) 8830 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr8-4314 chr8 98578235 98578445 + 10.3 0.000 intron (NM_006281, intron 8 of 10) intron (NM_006281, intron 8 of 10) 151382 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr11-4090 chr11 31580523 31580733 + 10.3 0.000 intron (NM_001288725, intron 3 of 10) (TC)n|Simple_repeat|Simple_repeat 70861 NM_019040 26610 Hs.175534 NM_019040 ENSG00000109911 ELP4 AN|AN2|C11orf19|PAX6NEB|PAXNEB|dJ68P15A.1|hELP4 elongator acetyltransferase complex subunit 4 protein-coding chr5-6563 chr5 16934355 16934565 + 10.3 0.000 intron (NM_012334, intron 1 of 40) intron (NM_012334, intron 1 of 40) 1828 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr21-797 chr21 45892744 45892954 + 10.3 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 42888 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr9-5092 chr9 34746068 34746278 + 10.3 0.000 Intergenic L1ME3A|LINE|L1 -16685 NM_001141917 259308 Hs.522093 NM_001141917 ENSG00000205108 FAM205A C9orf144B family with sequence similarity 205 member A protein-coding GL383581.2-1 GL383581.2 72394 72604 + 10.3 0.000 NA NA NA NA chrX-1390 chrX 154353906 154354116 + 10.3 0.000 exon (NM_001456, exon 34 of 47) exon (NM_001456, exon 34 of 47) 20623 NM_001110556 2316 Hs.195464 NM_001456 ENSG00000196924 FLNA ABP-280|ABPX|CSBS|CVD1|FGS2|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD filamin A protein-coding chr10-3228 chr10 104187101 104187311 + 10.3 0.000 intron (NM_025145, intron 14 of 37) intron (NM_025145, intron 14 of 37) 31677 NR_030340 693194 NR_030340 ENSG00000208033 MIR609 MIRN609|hsa-mir-609 microRNA 609 ncRNA chr9-3250 chr9 15458402 15458612 + 10.3 0.000 intron (NM_001369648, intron 8 of 8) intron (NM_001369648, intron 8 of 8) 35631 NR_161450 6619 Hs.546299 NM_003084 ENSG00000164975 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex polypeptide 3 protein-coding chr18-3439 chr18 65252191 65252401 + 10.3 0.000 Intergenic Intergenic -497956 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr1-12140 chr1 174332315 174332525 + 10.3 0.000 intron (NM_001366445, intron 11 of 13) AluSz|SINE|Alu 57320 NM_001366449 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr7-1868 chr7 23247362 23247572 + 10.3 0.000 intron (NM_001005340, intron 1 of 10) MER5B|DNA|hAT-Charlie 692 NM_001005340 10457 Hs.190495 NM_002510 ENSG00000136235 GPNMB HGFIN|NMB|PLCA3 glycoprotein nmb protein-coding chr7-4962 chr7 147541357 147541567 + 10.3 0.000 intron (NM_014141, intron 10 of 22) intron (NM_014141, intron 10 of 22) -130217 NR_133929 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr5-8682 chr5 141638131 141638341 + 10.3 0.000 exon (NM_173828, exon 1 of 7) exon (NM_173828, exon 1 of 7) 1239 NM_173828 285613 Hs.120094 NM_173828 ENSG00000164620 RELL2 C5orf16 RELT like 2 protein-coding chr6-4007 chr6 118637584 118637794 + 10.3 0.000 intron (NM_001178035, intron 2 of 13) AluSz6|SINE|Alu 13902 NM_206921 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr3-7920 chr3 143766641 143766851 + 10.3 0.000 intron (NM_173653, intron 4 of 15) AluSx|SINE|Alu 81722 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr4-2475 chr4 3439557 3439767 + 10.3 0.000 exon (NM_198229, exon 18 of 18) exon (NM_198229, exon 18 of 18) -2306 NM_001528 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr11-5667 chr11 128711088 128711298 + 10.3 0.000 intron (NM_002017, intron 1 of 8) MER3|DNA|hAT-Charlie -15170 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr6-1352 chr6 43488889 43489099 + 10.3 0.000 promoter-TSS (NM_001350566) promoter-TSS (NM_001350566) -590 NM_001146017 93643 Hs.520145 NM_080604 ENSG00000137221 TJAP1 PILT|TJP4 tight junction associated protein 1 protein-coding chr5-2501 chr5 150637597 150637807 + 10.3 0.000 intron (NM_001166208, intron 2 of 2) intron (NM_001166208, intron 2 of 2) -2958 NM_007286 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr1-5928 chr1 21322825 21323035 + 10.3 0.000 intron (NM_001113348, intron 1 of 18) intron (NM_001113348, intron 1 of 18) 22574 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr21-1400 chr21 44518657 44518867 + 10.3 0.000 non-coding (NR_026547, exon 3 of 3) non-coding (NR_026547, exon 3 of 3) 1547 NR_026548 114043 Hs.592163 NM_153204 TSPEAR-AS2 C21orf90 TSPEAR antisense RNA 2 ncRNA chr3-3619 chr3 99945692 99945902 + 10.3 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) 18601 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr22-1272 chr22 31241614 31241824 + 10.3 0.000 intron (NM_005569, intron 2 of 15) L2b|LINE|L2 -6665 NM_016733 3985 Hs.474596 NM_005569 ENSG00000182541 LIMK2 - LIM domain kinase 2 protein-coding chr11-6725 chr11 80862761 80862971 + 10.3 0.000 Intergenic Intergenic -100063 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr5-8457 chr5 131375377 131375587 + 10.3 0.000 intron (NM_001038702, intron 2 of 4) intron (NM_001038702, intron 2 of 4) 111473 NM_020240 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding chr17-6254 chr17 28968522 28968732 + 10.3 0.000 intron (NM_001290202, intron 4 of 16) intron (NM_001290202, intron 4 of 16) -17109 NM_001290131 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr20-1985 chr20 45905734 45905944 + 10.3 0.000 intron (NM_182676, intron 7 of 14) MIRb|SINE|MIR 5155 NM_001242921 5360 Hs.439312 NM_006227 ENSG00000100979 PLTP BPIFE|HDLCQ9 phospholipid transfer protein protein-coding chrX-612 chrX 154325606 154325816 + 10.3 0.000 intron (NM_001145934, intron 9 of 11) intron (NM_001145934, intron 9 of 11) 20654 NM_001145934 8277 Hs.102866 NM_012253 ENSG00000007350 TKTL1 TKR|TKT2 transketolase like 1 protein-coding chr16-5478 chr16 4559124 4559334 + 10.3 0.000 intron (NM_001145011, intron 1 of 15) intron (NM_001145011, intron 1 of 15) 2739 NM_001145011 342346 Hs.684212 NM_001145011 ENSG00000205832 C16orf96 - chromosome 16 open reading frame 96 protein-coding chr17-2355 chr17 67340017 67340227 + 10.3 0.000 3' UTR (NM_001316341, exon 13 of 13) 3' UTR (NM_001316341, exon 13 of 13) 26455 NM_174871 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr16-5129 chr16 124209 124419 + 10.3 0.000 intron (NM_001077350, intron 3 of 13) intron (NM_001077350, intron 3 of 13) 14359 NM_001077350 8131 Hs.19699 NM_012075 ENSG00000103148 NPRL3 C16orf35|CGTHBA|FFEVF3|HS-40|MARE|NPR3|RMD11 NPR3 like, GATOR1 complex subunit protein-coding chr1-8681 chr1 214518464 214518674 + 10.3 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 33033 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr6-7692 chr6 86437787 86437997 + 10.3 0.000 Intergenic Intergenic -499636 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr7-5335 chr7 28345954 28346164 + 10.3 0.000 intron (NM_182899, intron 1 of 9) LTR16A|LTR|ERVL 46738 NM_182899 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr7-1596 chr7 140062903 140063113 + 10.3 0.000 non-coding (NR_130117, exon 1 of 11) non-coding (NR_130117, exon 1 of 11) 713 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr1-6652 chr1 46094622 46094832 + 10.3 0.000 intron (NM_001303427, intron 1 of 9) intron (NM_001303427, intron 1 of 9) 35946 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr8-1664 chr8 28365802 28366012 + 10.3 0.000 intron (NM_018660, intron 1 of 9) intron (NM_018660, intron 1 of 9) 20553 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr22-3081 chr22 43339039 43339249 + 10.3 0.000 exon (NM_173050, exon 2 of 22) exon (NM_173050, exon 2 of 22) 4228 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr20-978 chr20 48824144 48824354 + 10.3 0.000 intron (NM_020820, intron 1 of 39) intron (NM_020820, intron 1 of 39) 3750 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr8-3395 chr8 61962090 61962300 + 10.3 0.000 Intergenic MLT2B1|LTR|ERVL 72356 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr2-6459 chr2 159249852 159250062 + 10.3 0.000 intron (NM_001330279, intron 8 of 9) AluSz6|SINE|Alu 36746 NM_001330278 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr20-1488 chr20 17909784 17909994 + 10.3 0.000 Intergenic Intergenic 53057 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr17-3468 chr17 42374396 42374606 + 10.3 0.000 intron (NM_213662, intron 1 of 23) AluSq2|SINE|Alu 13941 NM_001369518 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr6-6412 chr6 85082269 85082479 + 10.3 0.000 Intergenic HAL1|LINE|L1 307812 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr11-5874 chr11 11048029 11048239 + 10.3 0.000 Intergenic Intergenic 189917 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr9-2346 chr9 77417757 77417967 + 10.3 0.000 3' UTR (NM_033305, exon 72 of 72) 3' UTR (NM_033305, exon 72 of 72) -29787 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr1-7403 chr1 34721930 34722140 + 10.3 0.000 Intergenic LTR50|LTR|ERVL -33012 NM_005268 2709 Hs.198249 NM_005268 ENSG00000189280 GJB5 CX31.1 gap junction protein beta 5 protein-coding chr9-4085 chr9 126666176 126666386 + 10.3 0.000 intron (NM_001174146, intron 2 of 7) L2c|LINE|L2 51838 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr19-3910 chr19 42739007 42739217 + 10.3 0.000 intron (NM_021016, intron 1 of 6) intron (NM_021016, intron 1 of 6) 1369 NM_021016 5671 Hs.654413 NM_021016 ENSG00000221826 PSG3 - pregnancy specific beta-1-glycoprotein 3 protein-coding chr1-5594 chr1 7657093 7657303 + 10.3 0.000 intron (NM_001349608, intron 6 of 21) intron (NM_001349608, intron 6 of 21) -12532 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr8-2305 chr8 135679653 135679863 + 10.3 0.000 Intergenic L3|LINE|CR1 222302 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr18-2134 chr18 55201428 55201638 + 10.3 0.000 Intergenic Charlie2a|DNA|hAT-Charlie -77227 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr2-5590 chr2 175836629 175836839 + 10.3 0.000 Intergenic Intergenic 165533 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr11-3947 chr11 468171 468381 + 10.3 0.000 intron (NM_001329545, intron 2 of 10) L1MC3|LINE|L1 17997 NM_001329544 81490 Hs.12851 NM_030783 ENSG00000174915 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding chr10-3387 chr10 27736467 27736677 + 10.3 0.000 intron (NM_001242702, intron 3 of 6) intron (NM_001242702, intron 3 of 6) -8043 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr14-2887 chr14 35507107 35507317 + 10.3 0.000 Intergenic LTR79|LTR|ERVL -26952 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding chr11-6956 chr11 113447089 113447299 + 10.3 0.000 intron (NM_016574, intron 1 of 6) intron (NM_016574, intron 1 of 6) 2894 NR_036183 100422855 NR_036183 ENSG00000265140 MIR4301 - microRNA 4301 ncRNA chr22-585 chr22 38505590 38505800 + 10.3 0.000 intron (NM_006386, intron 1 of 12) CpG 616 NM_006386 10521 Hs.528305 NM_006386 ENSG00000100201 DDX17 P72|RH70 DEAD-box helicase 17 protein-coding chr10-3469 chr10 60304887 60305097 + 10.3 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 84883 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr9-8501 chr9 124639435 124639645 + 10.3 0.000 intron (NM_033334, intron 2 of 9) MIRb|SINE|MIR -18896 NR_038975 100379345 Hs.660412 NR_038975 ENSG00000224020 MIR181A2HG - MIR181A2 host gene ncRNA chrX-2003 chrX 14061589 14061799 + 10.3 0.000 Intergenic L1MA7|LINE|L1 -31802 NM_001042480 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chr18-1090 chr18 49136080 49136290 + 10.3 0.000 intron (NM_001353210, intron 14 of 16) intron (NM_001353210, intron 14 of 16) -86417 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr1-12624 chr1 38572425 38572635 + 10.3 0.000 Intergenic Intergenic 97334 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr16-2028 chr16 20676199 20676409 + 10.3 0.000 intron (NR_134918, intron 3 of 10) HERV15-int|LTR|ERV1 14952 NM_052956 116285 Hs.306812 NM_052956 ENSG00000166743 ACSM1 BUCS1|MACS1 acyl-CoA synthetase medium chain family member 1 protein-coding chr1-7794 chr1 48851762 48851972 + 10.3 0.000 intron (NR_136623, intron 5 of 12) intron (NR_136623, intron 5 of 12) -74898 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr8-3569 chr8 130339812 130340022 + 10.3 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -43384 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr2-5982 chr2 63070559 63070769 + 10.3 0.000 Intergenic L2|LINE|L2 19834 NM_014562 5013 Hs.734360 NM_014562 ENSG00000115507 OTX1 - orthodenticle homeobox 1 protein-coding chr3-5332 chr3 129539249 129539459 + 10.3 0.000 Intergenic Intergenic -3860 NM_153833 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr1-10199 chr1 112637255 112637465 + 10.3 0.000 intron (NM_006135, intron 1 of 9) L2a|LINE|L2 17528 NM_006135 829 Hs.744974 NM_006135 ENSG00000116489 CAPZA1 CAPPA1|CAPZ|CAZ1 capping actin protein of muscle Z-line subunit alpha 1 protein-coding chr1-4567 chr1 85504532 85504742 + 10.3 0.000 intron (NM_001134445, intron 1 of 6) MIRb|SINE|MIR -39478 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr19-1991 chr19 5914803 5915013 + 10.3 0.000 intron (NM_004058, intron 3 of 4) intron (NM_004058, intron 3 of 4) 654 NM_004058 828 Hs.584744 NM_004058 ENSG00000105519 CAPS CAPS1 calcyphosine protein-coding chr17-6600 chr17 55311854 55312064 + 10.3 0.000 intron (NM_001330375, intron 2 of 3) L1PA17|LINE|L1 45737 NM_001330375 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr4-2029 chr4 3433665 3433875 + 10.3 0.000 intron (NM_198227, intron 15 of 15) intron (NM_198227, intron 15 of 15) -8198 NM_001528 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr8-6722 chr8 86902653 86902863 + 10.3 0.000 intron (NM_173538, intron 2 of 10) intron (NM_173538, intron 2 of 10) 36343 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr2-3131 chr2 172097274 172097484 + 10.3 0.000 Intergenic Intergenic 5521 NM_004405 1746 Hs.419 NM_004405 ENSG00000115844 DLX2 TES-1|TES1 distal-less homeobox 2 protein-coding chr1-6506 chr1 24854809 24855019 + 10.3 0.000 Intergenic AluJb|SINE|Alu 64502 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr11-8967 chr11 20405357 20405567 + 10.3 0.000 intron (NM_005788, intron 8 of 15) intron (NM_005788, intron 8 of 15) 17746 NM_005788 10196 Hs.152337 NM_005788 ENSG00000185238 PRMT3 HRMT1L3 protein arginine methyltransferase 3 protein-coding chr16-2809 chr16 67148600 67148810 + 10.3 0.000 TTS (NM_001320540) TTS (NM_001320540) 2293 NM_033309 84752 Hs.744158 NM_033309 ENSG00000237172 B3GNT9 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 protein-coding chr2-5674 chr2 201750659 201750869 + 10.3 0.000 intron (NM_020919, intron 7 of 33) intron (NM_020919, intron 7 of 33) 30169 NM_001135745 57679 Hs.471096 NM_020919 ENSG00000003393 ALS2 ALS2CR6|ALSJ|IAHSP|PLSJ alsin Rho guanine nucleotide exchange factor ALS2 protein-coding chr1-2852 chr1 150765165 150765375 + 10.3 0.000 intron (NM_001199739, intron 1 of 6) intron (NM_001199739, intron 1 of 6) 508 NM_001199739 1520 Hs.181301 NM_004079 ENSG00000163131 CTSS - cathepsin S protein-coding chr5-2051 chr5 116935671 116935881 + 10.3 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -173567 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr2-4865 chr2 105328284 105328494 + 10.3 0.000 intron (NR_137328, intron 1 of 12) intron (NR_137328, intron 1 of 12) 1267 NR_137328 9392 Hs.446350 NM_004257 ENSG00000135966 TGFBRAP1 TRAP-1|TRAP1|VPS3 transforming growth factor beta receptor associated protein 1 protein-coding chr19-2087 chr19 46611273 46611483 + 10.3 0.000 TTS (NM_005184) TTS (NM_005184) 9306 NM_001329922 808 Hs.515487 NM_005184 ENSG00000160014 CALM3 CALM|CAM1|CAM2|CAMB|CaM|CaMIII|HEL-S-72|PHKD|PHKD3 calmodulin 3 protein-coding chr16-1657 chr16 55478732 55478942 + 10.3 0.000 promoter-TSS (NM_001302508) promoter-TSS (NM_001302508) 7 NM_001302508 4313 Hs.513617 NM_004530 ENSG00000087245 MMP2 CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1 matrix metallopeptidase 2 protein-coding chr3-8214 chr3 46830526 46830736 + 10.3 0.000 intron (NR_148409, intron 2 of 2) intron (NR_148409, intron 2 of 2) 3192 NR_148409 339906 Hs.585127 NM_182702 ENSG00000178055 PRSS42P PRSS42|TESSP2 serine protease 42, pseudogene pseudo chr20-2654 chr20 44122021 44122231 + 10.3 0.000 intron (NM_020433, intron 2 of 5) MIRb|SINE|MIR 65062 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr2-9121 chr2 207188602 207188812 + 10.3 0.000 intron (NR_110283, intron 3 of 3) intron (NR_110283, intron 3 of 3) -21461 NM_001270943 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr11-2342 chr11 75733565 75733775 + 10.3 0.000 TTS (NM_025098) TTS (NM_025098) 15832 NM_025098 80168 Hs.288568 NM_025098 ENSG00000166391 MOGAT2 DGAT2L5|DGAT2L5.|MGAT2|hDC5 monoacylglycerol O-acyltransferase 2 protein-coding chr12-4443 chr12 10709561 10709771 + 10.3 0.000 intron (NM_001145426, intron 5 of 8) intron (NM_001145426, intron 5 of 8) 13657 NM_003651 8531 Hs.221889 NM_003651 ENSG00000060138 YBX3 CSDA|CSDA1|DBPA|ZONAB Y-box binding protein 3 protein-coding chr14-1781 chr14 102221169 102221379 + 10.3 0.000 intron (NM_001353658, intron 4 of 4) intron (NM_001353658, intron 4 of 4) 14152 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr9-7498 chr9 31835718 31835928 + 10.3 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -454333 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr10-4475 chr10 79116673 79116883 + 10.3 0.000 intron (NM_020338, intron 1 of 24) L1ME3A|LINE|L1 47812 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr10-2128 chr10 9254914 9255124 + 10.3 0.000 intron (NR_120635, intron 4 of 4) AluY|SINE|Alu -20594 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr4-6412 chr4 124413945 124414155 + 10.3 0.000 Intergenic Intergenic 144384 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr19-2406 chr19 17784257 17784467 + 10.3 0.000 intron (NM_001161357, intron 25 of 28) intron (NM_001161357, intron 25 of 28) -10776 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr20-3360 chr20 32642126 32642336 + 10.3 0.000 intron (NM_182584, intron 4 of 5) intron (NM_182584, intron 4 of 5) 31710 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr17-5438 chr17 39160590 39160800 + 10.3 0.000 exon (NM_001143968, exon 5 of 6) exon (NM_001143968, exon 5 of 6) 5466 NM_001143968 390790 Hs.568007 NM_001143968 ENSG00000141748 ARL5C ARL12 ADP ribosylation factor like GTPase 5C protein-coding chr4-3542 chr4 168637627 168637837 + 10.3 0.000 intron (NM_001166109, intron 1 of 18) AluSz|SINE|Alu 6154 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr19-3457 chr19 31233098 31233308 + 10.3 0.000 intron (NR_138036, intron 1 of 4) L1ME2|LINE|L1 65693 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr2-3776 chr2 10220800 10221010 + 10.3 0.000 Intergenic L1MB3|LINE|L1 -28234 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr3-5574 chr3 6135228 6135438 + 10.3 0.000 Intergenic L1MA8|LINE|L1 670116 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr11-5835 chr11 8650733 8650943 + 10.3 0.000 intron (NM_014818, intron 2 of 19) L2b|LINE|L2 7998 NM_014818 9866 Hs.130836 NM_014818 ENSG00000166436 TRIM66 C11orf29|TIF1D|TIF1DELTA tripartite motif containing 66 protein-coding chr9-4686 chr9 124422497 124422707 + 10.3 0.000 Intergenic AluSx|SINE|Alu -7160 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr11-6000 chr11 21421061 21421271 + 10.3 0.000 intron (NM_201551, intron 15 of 18) HAL1|LINE|L1 751580 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr2-13797 chr2 173568893 173569103 + 10.3 0.000 Intergenic L2a|LINE|L2 214126 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr5-3706 chr5 11168914 11169124 + 10.3 0.000 intron (NM_001288715, intron 10 of 20) MER110|LTR|ERV1 -407785 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr13-1816 chr13 52011254 52011464 + 10.3 0.000 promoter-TSS (NM_001330579) promoter-TSS (NM_001330579) 91 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chr7-1749 chr7 36390312 36390522 + 10.3 0.000 promoter-TSS (NM_001100425) promoter-TSS (NM_001100425) -60 NM_001100425 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr17-8266 chr17 67078428 67078638 + 10.3 0.000 exon (NM_014877, exon 33 of 33) exon (NM_014877, exon 33 of 33) 33979 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr10-1983 chr10 34758126 34758336 + 10.3 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 57065 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr1-12997 chr1 157189211 157189421 + 10.3 0.000 Intergenic L2|LINE|L2 -50725 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr1-11430 chr1 65248007 65248217 + 10.3 0.000 Intergenic Intergenic -16582 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr1-6707 chr1 56301939 56302149 + 10.3 0.000 Intergenic Plat_L3|LINE|CR1 -112919 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr9-1440 chr9 134468261 134468471 + 10.3 0.000 Intergenic Intergenic 61806 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr7-9728 chr7 157184925 157185135 + 10.3 0.000 intron (NM_014671, intron 9 of 22) intron (NM_014671, intron 9 of 22) 46104 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr2-10098 chr2 54950079 54950289 + 10.3 0.000 intron (NM_001039753, intron 28 of 40) intron (NM_001039753, intron 28 of 40) 60088 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr5-1173 chr5 31638953 31639163 + 10.3 0.000 promoter-TSS (NM_178140) promoter-TSS (NM_178140) -73 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr7-2111 chr7 17706830 17707040 + 10.3 0.000 Intergenic Intergenic -148026 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr10-3898 chr10 63933176 63933386 + 10.3 0.000 Intergenic Intergenic -411391 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr2-6348 chr2 88089867 88090077 + 10.3 0.000 intron (NM_001330364, intron 3 of 8) intron (NM_001330364, intron 3 of 8) -7373 NR_039940 100616447 NR_039940 ENSG00000265003 MIR4780 - microRNA 4780 ncRNA chr6-3444 chr6 145836241 145836451 + 10.3 0.000 intron (NR_038246, intron 2 of 2) intron (NR_038246, intron 2 of 2) 21470 NR_038245 100507557 Hs.124537 NR_038244 ENSG00000235652 LOC100507557 - uncharacterized LOC100507557 ncRNA chr2-6512 chr2 195532394 195532604 + 10.3 0.000 Intergenic Intergenic -124459 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr9-4023 chr9 73219095 73219305 + 10.3 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 67335 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr8-2381 chr8 47944620 47944830 + 10.3 0.000 intron (NM_001081640, intron 7 of 84) intron (NM_001081640, intron 7 of 84) 15411 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr4-5623 chr4 3677197 3677407 + 10.3 0.000 non-coding (NR_034136, exon 1 of 3) non-coding (NR_034136, exon 1 of 3) 553 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr1-5799 chr1 184212902 184213112 + 10.3 0.000 Intergenic MIRb|SINE|MIR 161277 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr19-4089 chr19 14512387 14512597 + 10.3 0.000 Intergenic AluSz|SINE|Alu 5370 NM_001300914 3337 Hs.515210 NM_006145 ENSG00000132002 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ heat shock protein family (Hsp40) member B1 protein-coding chr10-2555 chr10 68105910 68106120 + 10.3 0.000 promoter-TSS (NM_001256267) promoter-TSS (NM_001256267) 8 NR_045662 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr19-5171 chr19 8093891 8094101 + 10.3 0.000 intron (NM_032447, intron 47 of 63) intron (NM_032447, intron 47 of 63) 41234 NM_005624 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr3-4453 chr3 38835119 38835329 + 10.3 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -41214 NM_006514 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr13-3670 chr13 33727363 33727573 + 10.3 0.000 Intergenic Intergenic -50674 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr5-2822 chr5 38384366 38384576 + 10.3 0.000 intron (NM_152403, intron 6 of 21) intron (NM_152403, intron 6 of 21) 19000 NR_102749 100506475 Hs.662304 NR_102749 ENSG00000248572 EGFLAM-AS2 - EGFLAM antisense RNA 2 ncRNA chr16-2760 chr16 3607567 3607777 + 10.3 0.000 intron (NM_032444, intron 2 of 14) AluJb|SINE|Alu 3934 NM_032444 84464 Hs.143681 NM_032444 ENSG00000188827 SLX4 BTBD12|FANCP|MUS312 SLX4 structure-specific endonuclease subunit protein-coding chr20-3379 chr20 35064326 35064536 + 10.3 0.000 intron (NM_199368, intron 3 of 18) intron (NM_199368, intron 3 of 18) 28376 NM_015638 26133 Hs.168073 NM_015638 ENSG00000100991 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel subfamily C member 4 associated protein protein-coding chr1-12867 chr1 105622570 105622780 + 10.3 0.000 Intergenic L1M3c|LINE|L1 -3740 NR_125954 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr11-8928 chr11 17457451 17457661 + 10.3 0.000 intron (NR_147094, intron 6 of 37) intron (NR_147094, intron 6 of 37) 19289 NR_147094 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr20-900 chr20 45059448 45059658 + 10.3 0.000 intron (NM_001352385, intron 11 of 11) MER44C|DNA|TcMar-Tigger 41574 NM_001322799 3787 Hs.117780 NM_002251 ENSG00000124134 KCNS1 Kv9.1 potassium voltage-gated channel modifier subfamily S member 1 protein-coding chr4-4520 chr4 65658066 65658276 + 10.3 0.000 intron (NM_001281767, intron 1 of 16) intron (NM_001281767, intron 1 of 16) 11317 NM_001318761 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr19-1355 chr19 47713273 47713483 + 10.3 0.000 promoter-TSS (NM_014601) promoter-TSS (NM_014601) -44 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr6-5708 chr6 135985260 135985470 + 10.3 0.000 intron (NM_018945, intron 2 of 12) intron (NM_018945, intron 2 of 12) 87462 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr6-4343 chr6 17491866 17492076 + 10.3 0.000 intron (NM_001363533, intron 4 of 9) intron (NM_001363533, intron 4 of 9) 19294 NR_110855 101928491 Hs.622876 NR_110855 LOC101928491 - uncharacterized LOC101928491 ncRNA chr17-3525 chr17 68318579 68318789 + 10.3 0.000 intron (NM_001352899, intron 2 of 12) intron (NM_001352899, intron 2 of 12) 26549 NM_001352901 22901 Hs.437249 NM_014960 ENSG00000141337 ARSG USH4 arylsulfatase G protein-coding chr5-5765 chr5 173094272 173094482 + 10.3 0.000 intron (NM_153607, intron 4 of 8) L1MA9|LINE|L1 38025 NM_001168393 153222 Hs.484195 NM_153607 ENSG00000164463 CREBRF C5orf41|LRF CREB3 regulatory factor protein-coding chr5-8763 chr5 147689996 147690206 + 10.3 0.000 intron (NM_001270934, intron 1 of 20) AluJr|SINE|Alu 92627 NM_001282282 9832 Hs.740461 NM_014790 ENSG00000176049 JAKMIP2 JAMIP2|NECC1 janus kinase and microtubule interacting protein 2 protein-coding chr4-3764 chr4 89373694 89373904 + 10.3 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -65999 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr1-4753 chr1 8352647 8352857 + 10.3 0.000 3' UTR (NM_012102, exon 24 of 24) 3' UTR (NM_012102, exon 24 of 24) 34667 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr11-10415 chr11 115229180 115229390 + 10.3 0.000 intron (NM_001098517, intron 4 of 8) intron (NM_001098517, intron 4 of 8) -104292 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr3-4355 chr3 185051614 185051824 + 10.3 0.000 intron (NM_001009921, intron 46 of 46) MIR3|SINE|MIR 101341 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr9-3732 chr9 116661270 116661480 + 10.3 0.000 intron (NM_014010, intron 15 of 21) intron (NM_014010, intron 15 of 21) 25840 NM_198186 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr19-2667 chr19 11237798 11238008 + 10.3 0.000 intron (NM_001367830, intron 16 of 48) intron (NM_001367830, intron 16 of 48) -1716 NM_018687 55908 Hs.534467 NM_018687 ENSG00000130173 ANGPTL8 C19orf80|PRO1185|PVPA599|RIFL|TD26 angiopoietin like 8 protein-coding chr2-9761 chr2 95719070 95719280 + 10.3 0.000 Intergenic L3|LINE|CR1 107806 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr19-1233 chr19 31349291 31349501 + 10.3 0.000 promoter-TSS (NR_138035) promoter-TSS (NR_138035) 40 NR_138036 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr6-1902 chr6 4929105 4929315 + 10.3 0.000 intron (NM_001368126, intron 2 of 6) L1MEf|LINE|L1 39170 NM_001143971 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chrX-1023 chrX 67466202 67466412 + 10.3 0.000 Intergenic L1M1|LINE|L1 -77714 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr10-3195 chr10 92344513 92344723 + 10.3 0.000 intron (NM_017824, intron 3 of 5) intron (NM_017824, intron 3 of 5) 53451 NM_017824 54708 Hs.573490 NM_017824 ENSG00000198060 MARCH5 MARCH-V|MITOL|RNF153 membrane associated ring-CH-type finger 5 protein-coding chr3-6677 chr3 130771357 130771567 + 10.3 0.000 Intergenic Intergenic -24633 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr2-14682 chr2 237393385 237393595 + 10.3 0.000 intron (NM_057165, intron 2 of 7) intron (NM_057165, intron 2 of 7) 20674 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr9-1829 chr9 132878258 132878468 + 10.3 0.000 promoter-TSS (NR_133631) promoter-TSS (NR_133631) 19 NM_001316898 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr14-2484 chr14 99265281 99265491 + 10.3 0.000 intron (NM_022898, intron 1 of 2) intron (NM_022898, intron 1 of 2) 6811 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr6-6819 chr6 6926045 6926255 + 10.3 0.000 Intergenic Intergenic -181593 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr16-3338 chr16 3862087 3862297 + 10.3 0.000 intron (NM_004380, intron 1 of 30) intron (NM_004380, intron 1 of 30) 17928 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr19-4865 chr19 39335595 39335805 + 10.3 0.000 intron (NM_004877, intron 1 of 6) MER91A|DNA|hAT-Tip100 343 NM_004877 9535 Hs.5210 NM_004877 ENSG00000130755 GMFG GMF-GAMMA glia maturation factor gamma protein-coding chr17-2198 chr17 77036325 77036535 + 10.3 0.000 Intergenic Intergenic -52213 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr10-4430 chr10 69090907 69091117 + 10.3 0.000 intron (NM_001321054, intron 1 of 1) intron (NM_001321054, intron 1 of 1) 2909 NM_002727 5552 Hs.1908 NM_002727 ENSG00000122862 SRGN PPG|PRG|PRG1 serglycin protein-coding chr7-3354 chr7 93949512 93949722 + 10.3 0.000 Intergenic Intergenic 27882 NM_004126 2791 Hs.83381 NM_004126 ENSG00000127920 GNG11 GNGT11 G protein subunit gamma 11 protein-coding chr1-7396 chr1 31740658 31740868 + 10.3 0.000 intron (NM_001294335, intron 11 of 32) intron (NM_001294335, intron 11 of 32) 17972 NR_036216 100423028 NR_036216 ENSG00000266580 MIR4254 - microRNA 4254 ncRNA chr22-1093 chr22 32529004 32529214 + 10.3 0.000 intron (NM_003490, intron 10 of 13) intron (NM_003490, intron 10 of 13) 53872 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr2-14080 chr2 198980730 198980940 + 10.3 0.000 Intergenic L2b|LINE|L2 477104 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr1-9380 chr1 30602092 30602302 + 10.3 0.000 Intergenic Intergenic -116575 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr5-3323 chr5 130967970 130968180 + 10.3 0.000 Intergenic Intergenic 197181 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr5-2071 chr5 141854011 141854221 + 10.3 0.000 exon (NM_032420, exon 5 of 5) exon (NM_032420, exon 5 of 5) 12086 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr17-5472 chr17 40530561 40530771 + 10.3 0.000 Intergenic Intergenic -29043 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr5-4785 chr5 56206620 56206830 + 10.3 0.000 intron (NM_024669, intron 2 of 11) intron (NM_024669, intron 2 of 11) 26605 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr3-3356 chr3 27596767 27596977 + 10.3 0.000 Intergenic Intergenic -112488 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr22-1409 chr22 40709792 40710002 + 10.3 0.000 Intergenic Intergenic 30719 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr9-3994 chr9 19608855 19609065 + 10.3 0.000 intron (NM_020344, intron 3 of 9) intron (NM_020344, intron 3 of 9) 178059 NM_001193288 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr16-3725 chr16 5910332 5910542 + 10.3 0.000 Intergenic Intergenic -108587 NM_001142333 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr13-1728 chr13 99174146 99174356 + 10.3 0.000 Intergenic Intergenic 26504 NR_036532 100289373 Hs.225914 NR_036531 ENSG00000228889 UBAC2-AS1 - UBAC2 antisense RNA 1 ncRNA chr1-9510 chr1 38421798 38422008 + 10.3 0.000 Intergenic L1MC4|LINE|L1 -53293 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr6-1552 chr6 130933881 130934091 + 10.3 0.000 intron (NR_146620, intron 1 of 12) intron (NR_146620, intron 1 of 12) 36497 NM_001350310 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr10-4344 chr10 30049365 30049575 + 10.3 0.000 intron (NM_001350021, intron 1 of 4) intron (NM_001350021, intron 1 of 4) 10116 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr2-4475 chr2 239682275 239682485 + 10.3 0.000 Intergenic Intergenic -80480 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr19-4779 chr19 33117662 33117872 + 10.3 0.000 intron (NR_135270, intron 16 of 20) intron (NR_135270, intron 16 of 20) -14347 NM_173479 126248 Hs.211046 NM_173479 ENSG00000166359 WDR88 PQWD WD repeat domain 88 protein-coding chr9-3598 chr9 83432184 83432394 + 10.3 0.000 intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 35453 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr8-1565 chr8 123550780 123550990 + 10.3 0.000 Intergenic Intergenic -9679 NM_058229 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr3-3478 chr3 186417975 186418185 + 10.3 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -22265 NR_151709 107986164 Hs.131227 NR_151708 ENSG00000234548 LINC02020 - long intergenic non-protein coding RNA 2020 ncRNA chr10-5493 chr10 80504158 80504368 + 10.3 0.000 intron (NM_001128309, intron 2 of 5) intron (NM_001128309, intron 2 of 5) 31679 NR_120661 101929574 Hs.593663 NR_120661 ENSG00000226659 LOC101929574 - uncharacterized LOC101929574 ncRNA chr6-1747 chr6 45900876 45901086 + 10.3 0.000 non-coding (NR_045672, exon 3 of 3) non-coding (NR_045672, exon 3 of 3) 36616 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr20-1307 chr20 59515714 59515924 + 10.3 0.000 Intergenic Intergenic -61690 NM_001199505 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr12-4580 chr12 30963228 30963438 + 10.3 0.000 intron (NM_001370302, intron 2 of 7) MIRc|SINE|MIR 36429 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr4-4131 chr4 7493112 7493322 + 10.3 0.000 intron (NM_020777, intron 2 of 26) MLT1J1|LTR|ERVL-MaLR 33189 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr17-3270 chr17 39855095 39855305 + 10.3 0.000 intron (NM_012481, intron 1 of 7) intron (NM_012481, intron 1 of 7) 8988 NM_001284514 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr2-4970 chr2 196660350 196660560 + 10.3 0.000 intron (NM_001353339, intron 3 of 22) L1MC2|LINE|L1 20740 NM_001080539 284992 Hs.132519 NM_173466 ENSG00000144395 CCDC150 - coiled-coil domain containing 150 protein-coding chr19-4505 chr19 6482242 6482452 + 10.3 0.000 promoter-TSS (NM_001290331) promoter-TSS (NM_001290331) -560 NM_001290331 79958 Hs.236449 NM_024898 ENSG00000205744 DENND1C FAM31C DENN domain containing 1C protein-coding chr10-3394 chr10 29163901 29164111 + 10.3 0.000 Intergenic Intergenic -125064 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr12-2046 chr12 85237280 85237490 + 10.3 0.000 intron (NM_001079910, intron 26 of 26) L1MD2|LINE|L1 -42835 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr16-2554 chr16 56849059 56849269 + 10.3 0.000 3' UTR (NM_001242795, exon 20 of 20) 3' UTR (NM_001242795, exon 20 of 20) -9354 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr11-3366 chr11 124633431 124633641 + 10.3 0.000 non-coding (NR_016021, exon 8 of 8) non-coding (NR_016021, exon 8 of 8) 10672 NM_032811 84897 Hs.436410 NM_032811 ENSG00000154144 TBRG1 NIAM|TB-5 transforming growth factor beta regulator 1 protein-coding chr11-5662 chr11 127829709 127829919 + 10.3 0.000 Intergenic L1MCa|LINE|L1 -378952 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr6-4642 chr6 48099068 48099278 + 10.3 0.000 Intergenic Intergenic -30484 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr2-9066 chr2 201777021 201777231 + 10.3 0.000 intron (NM_020919, intron 1 of 33) intron (NM_020919, intron 1 of 33) 3807 NM_001135745 57679 Hs.471096 NM_020919 ENSG00000003393 ALS2 ALS2CR6|ALSJ|IAHSP|PLSJ alsin Rho guanine nucleotide exchange factor ALS2 protein-coding chr18-770 chr18 22169594 22169804 + 10.3 0.000 promoter-TSS (NR_102763) promoter-TSS (NR_102763) 262 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr1-3186 chr1 109934276 109934486 + 10.3 0.000 Intergenic Intergenic 23532 NM_172211 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr1-2399 chr1 183148648 183148858 + 10.3 0.000 Intergenic Intergenic -7483 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr17-4641 chr17 14970010 14970220 + 10.3 0.000 Intergenic L1PB1|LINE|L1 -44690 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr4-3806 chr4 111789127 111789337 + 10.3 0.000 Intergenic Intergenic -356222 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr13-1519 chr13 23466693 23466903 + 10.3 0.000 Intergenic CpG -2714 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr15-2060 chr15 59175601 59175811 + 10.3 0.000 intron (NM_004998, intron 19 of 27) intron (NM_004998, intron 19 of 27) -4444 NR_031750 100313886 NR_031750 ENSG00000253030 MIR2116 mir-2116 microRNA 2116 ncRNA chr9-1903 chr9 128286469 128286679 + 10.3 0.000 intron (NM_001040011, intron 4 of 4) intron (NM_001040011, intron 4 of 4) 10428 NM_001318089 375757 Hs.259594 NM_001040011 ENSG00000175854 SWI5 C9orf119|SAE3 SWI5 homologous recombination repair protein protein-coding chr20-3769 chr20 20397102 20397312 + 10.3 0.000 intron (NM_020343, intron 38 of 39) intron (NM_020343, intron 38 of 39) 29103 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr22-3399 chr22 35646798 35647008 + 10.3 0.000 Intergenic Intergenic -1543 NM_030641 80830 Hs.257352 NM_030641 ENSG00000221963 APOL6 APOL-VI|APOLVI apolipoprotein L6 protein-coding chr6-3545 chr6 43856034 43856244 + 10.3 0.000 Intergenic Intergenic -3806 NR_149142 285857 Hs.582798 NR_149142 ENSG00000283215 LINC02537 - long intergenic non-protein coding RNA 2537 ncRNA chr9-1971 chr9 97811893 97812103 + 10.3 0.000 intron (NR_147055, intron 1 of 10) intron (NR_147055, intron 1 of 10) 41082 NR_147055 101928337 NR_147055 ENSG00000236130 PTCSC2 - papillary thyroid carcinoma susceptibility candidate 2 ncRNA chr18-1530 chr18 10668680 10668890 + 10.3 0.000 Intergenic Intergenic 6852 NR_110777 101927410 Hs.436902 NR_110777 ENSG00000260779 LOC101927410 - uncharacterized LOC101927410 ncRNA chr9-3799 chr9 128202127 128202337 + 10.3 0.000 intron (NM_012127, intron 1 of 16) intron (NM_012127, intron 1 of 16) -1147 NM_001005336 1759 Hs.522413 NM_004408 ENSG00000106976 DNM1 DNM|EIEE31 dynamin 1 protein-coding chr16-3753 chr16 23071084 23071294 + 10.3 0.000 intron (NM_020718, intron 15 of 15) intron (NM_020718, intron 15 of 15) 78081 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr18-1745 chr18 6926267 6926477 + 10.3 0.000 intron (NR_034100, intron 5 of 6) AluJr|SINE|Alu 3497 NR_034100 400643 Hs.253920 NM_001103383 ENSG00000265933 LINC00668 - long intergenic non-protein coding RNA 668 ncRNA chr16-5287 chr16 63529602 63529812 + 10.3 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -1493269 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr9-2022 chr9 136023899 136024109 + 10.3 0.000 intron (NM_144653, intron 2 of 5) intron (NM_144653, intron 2 of 5) -62631 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr14-1900 chr14 102544236 102544446 + 10.3 0.000 promoter-TSS (NR_146561) promoter-TSS (NR_146561) -913 NR_146561 105370681 NR_146561 ENSG00000259230 LINC02323 - long intergenic non-protein coding RNA 2323 ncRNA chr18-2557 chr18 3463405 3463615 + 10.3 0.000 Intergenic Intergenic -2740 NR_110429 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr9-4002 chr9 33803913 33804123 + 10.3 0.000 Intergenic Intergenic 8457 NM_002771 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr12-2136 chr12 94994452 94994662 + 10.3 0.000 intron (NM_018838, intron 2 of 3) intron (NM_018838, intron 2 of 3) 9140 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13|MC1DN23 NADH:ubiquinone oxidoreductase subunit A12 protein-coding chr2-7148 chr2 197107297 197107507 + 10.3 0.000 intron (NM_153697, intron 9 of 9) intron (NM_153697, intron 9 of 9) -90589 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr2-6227 chr2 27729623 27729833 + 10.3 0.000 intron (NR_160725, intron 2 of 2) intron (NR_160725, intron 2 of 2) 13605 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr20-1846 chr20 13930222 13930432 + 10.3 0.000 intron (NR_073206, intron 3 of 20) LTR33|LTR|ERVL 60287 NM_001271539 80343 Hs.590879 NM_025229 ENSG00000101251 SEL1L2 C20orf50|sel-1L2 SEL1L2 adaptor subunit of ERAD E3 ligase protein-coding chr10-4689 chr10 132500902 132501112 + 10.3 0.000 Intergenic L1MB3|LINE|L1 35916 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr14-2036 chr14 63100391 63100601 + 10.3 0.000 Intergenic Intergenic -55038 NM_172375 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr1-5404 chr1 10766864 10767074 + 10.3 0.000 intron (NM_001079843, intron 1 of 20) intron (NM_001079843, intron 1 of 20) 29677 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr10-1910 chr10 126452764 126452974 + 10.3 0.000 intron (NR_148989, intron 5 of 6) intron (NR_148989, intron 5 of 6) 26939 NR_148989 728158 Hs.646701 NR_148989 LOC728158 - uncharacterized LOC728158 ncRNA chr7-5785 chr7 78132393 78132603 + 10.3 0.000 intron (NM_001301128, intron 17 of 20) L2b|LINE|L2 -214744 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr17-3385 chr17 82816594 82816804 + 10.3 0.000 intron (NM_005993, intron 13 of 38) AluSq|SINE|Alu 23323 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr1-12705 chr1 53385967 53386177 + 10.3 0.000 Intergenic Intergenic 53948 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr3-6149 chr3 57427510 57427720 + 10.3 0.000 intron (NM_001366028, intron 34 of 73) AluSx|SINE|Alu 116729 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr11-3521 chr11 3199547 3199757 + 10.3 0.000 Intergenic Intergenic -18680 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr4-3004 chr4 124234820 124235030 + 10.3 0.000 Intergenic Intergenic 323509 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr20-1189 chr20 4067739 4067949 + 10.3 0.000 Intergenic LTR78B|LTR|ERV1 -52286 NM_001134337 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr20-912 chr20 53707786 53707996 + 10.3 0.000 Intergenic Intergenic 99537 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr7-8867 chr7 90057256 90057466 + 10.3 0.000 intron (NR_110029, intron 2 of 2) LTR16D|LTR|ERVL -62039 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr1-8414 chr1 87115589 87115799 + 10.3 0.000 Intergenic Intergenic -14071 NR_026989 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr9-2491 chr9 91884820 91885030 + 10.3 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 65303 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr11-4309 chr11 68504786 68504996 + 10.3 0.000 intron (NM_001352362, intron 2 of 24) intron (NM_001352362, intron 2 of 24) 44139 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr10-3746 chr10 119859501 119859711 + 10.3 0.000 intron (NM_024834, intron 2 of 15) intron (NM_024834, intron 2 of 15) 13277 NM_024834 79892 Hs.124246 NM_024834 ENSG00000197771 MCMBP C10orf119|MCM-BP minichromosome maintenance complex binding protein protein-coding chr8-1170 chr8 26451228 26451438 + 10.3 0.000 Intergenic Intergenic 60920 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr16-4527 chr16 62972803 62973013 + 10.3 0.000 Intergenic LTR16E2|LTR|ERVL -936470 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr12-6206 chr12 23959803 23960013 + 10.3 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -8876 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr22-3667 chr22 22938377 22938587 + 10.3 0.000 Intergenic MIRc|SINE|MIR 50666 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr1-4476 chr1 13764706 13764916 + 10.3 0.000 intron (NM_001135610, intron 6 of 7) intron (NM_001135610, intron 6 of 7) 15396 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr13-3341 chr13 71357423 71357633 + 10.3 0.000 Intergenic L2b|LINE|L2 342387 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr15-5043 chr15 84121981 84122191 + 10.3 0.000 intron (NR_036652, intron 9 of 9) intron (NR_036652, intron 9 of 9) 41899 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr12-7409 chr12 57803306 57803516 + 10.3 0.000 TTS (NM_001172697) TTS (NM_001172697) 12658 NM_006576 10677 Hs.584854 NM_006576 ENSG00000135407 AVIL ADVIL|DOC6|p92 advillin protein-coding chr10-2157 chr10 96987882 96988092 + 10.3 0.000 3' UTR (NM_001346516, exon 8 of 8) 3' UTR (NM_001346516, exon 8 of 8) -114769 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA KI270770.1-1 KI270770.1 12345 12555 + 10.3 0.000 NA NA NA NA chr4-4862 chr4 113445398 113445608 + 10.3 0.000 Intergenic Intergenic 152664 NM_001354279 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr1-12073 chr1 150806527 150806737 + 10.3 0.000 intron (NM_000396, intron 2 of 7) intron (NM_000396, intron 2 of 7) 1628 NM_000396 1513 Hs.632466 NM_000396 ENSG00000143387 CTSK CTS02|CTSO|CTSO1|CTSO2|PKND|PYCD cathepsin K protein-coding chr8-2097 chr8 133499124 133499334 + 10.3 0.000 intron (NM_003033, intron 2 of 8) MIRb|SINE|MIR 72658 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr16-3978 chr16 88901101 88901311 + 10.3 0.000 intron (NM_005187, intron 2 of 11) intron (NM_005187, intron 2 of 11) 17691 NR_135194 101927793 Hs.690953 NR_135194 ENSG00000259881 LOC101927793 - uncharacterized LOC101927793 ncRNA chr21-569 chr21 45453663 45453873 + 10.3 0.000 intron (NM_130445, intron 2 of 42) intron (NM_130445, intron 2 of 42) -1754 NM_030582 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr9-8282 chr9 112892745 112892955 + 10.3 0.000 Intergenic Intergenic -1974 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chrX-2877 chrX 146037400 146037610 + 10.3 0.000 Intergenic Intergenic -9633 NR_030581 100126341 NR_030581 ENSG00000216056 MIR891A MIRN891A microRNA 891a ncRNA chr3-10482 chr3 135042448 135042658 + 10.3 0.000 intron (NM_004441, intron 3 of 15) MER53|DNA|hAT 247293 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr18-1195 chr18 29672598 29672808 + 10.3 0.000 Intergenic L1PREC2|LINE|L1 -626207 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr11-2954 chr11 75241234 75241444 + 10.3 0.000 exon (NM_001195528, exon 1 of 1) exon (NM_001195528, exon 1 of 1) 565 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr17-1433 chr17 5282251 5282461 + 10.3 0.000 promoter-TSS (NM_004703) promoter-TSS (NM_004703) 72 NM_001291581 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr20-3093 chr20 24495413 24495623 + 10.3 0.000 intron (NM_001323606, intron 2 of 4) intron (NM_001323606, intron 2 of 4) 25557 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr17-2605 chr17 80621611 80621821 + 10.3 0.000 intron (NM_020761, intron 1 of 33) intron (NM_020761, intron 1 of 33) 76878 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr4-4734 chr4 93709574 93709784 + 10.3 0.000 intron (NM_001286838, intron 13 of 14) L1M1|LINE|L1 -119074 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr2-4328 chr2 238200722 238200932 + 10.3 0.000 intron (NM_030768, intron 1 of 11) MIR|SINE|MIR 2868 NM_030768 80895 Hs.92033 NM_030768 ENSG00000132323 ILKAP ILKAP2|ILKAP3|PP2C-DELTA|PPM1O ILK associated serine/threonine phosphatase protein-coding chr17-3133 chr17 41578475 41578685 + 10.3 0.000 Intergenic Intergenic -6521 NM_000226 3857 Hs.654569 NM_000226 ENSG00000171403 KRT9 CK-9|EPPK|K9 keratin 9 protein-coding chr6-7434 chr6 54028558 54028768 + 10.3 0.000 intron (NM_001281746, intron 1 of 11) intron (NM_001281746, intron 1 of 11) 9693 NM_001281746 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr14-1438 chr14 76633606 76633816 + 10.3 0.000 Intergenic Intergenic -127757 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr2-4440 chr2 181203545 181203755 + 10.3 0.000 intron (NR_130784, intron 1 of 4) ERVL-B4-int|LTR|ERVL 79813 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA chr11-9905 chr11 75047594 75047804 + 10.3 0.000 Intergenic L1PBa|LINE|L1 49191 NM_001005285 341152 Hs.554515 NM_001005285 ENSG00000171561 OR2AT4 OR11-265 olfactory receptor family 2 subfamily AT member 4 protein-coding chr7-1937 chr7 47482418 47482628 + 10.3 0.000 intron (NM_022748, intron 3 of 30) intron (NM_022748, intron 3 of 30) -17720 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr6-4239 chr6 6279379 6279589 + 10.3 0.000 intron (NM_000129, intron 3 of 14) intron (NM_000129, intron 3 of 14) 41207 NM_000129 2162 Hs.335513 NM_000129 ENSG00000124491 F13A1 F13A coagulation factor XIII A chain protein-coding chr3-2227 chr3 37905439 37905649 + 10.3 0.000 intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) 43664 NM_005808 10217 Hs.475963 NM_005808 ENSG00000144677 CTDSPL C3orf8|HYA22|PSR1|RBSP3|SCP3 CTD small phosphatase like protein-coding chr5-7367 chr5 19917519 19917729 + 10.3 0.000 intron (NM_001349562, intron 2 of 13) intron (NM_001349562, intron 2 of 13) -31352 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr8-1833 chr8 138859875 138860085 + 10.3 0.000 intron (NM_152888, intron 3 of 64) intron (NM_152888, intron 3 of 64) 54061 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr1-15746 chr1 171836010 171836220 + 10.3 0.000 Intergenic MARNA|DNA|TcMar-Mariner -5383 NM_001350206 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chr4-5295 chr4 177001430 177001640 + 10.3 0.000 Intergenic Intergenic 125833 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr10-4833 chr10 13055828 13056038 + 10.3 0.000 intron (NM_001282658, intron 4 of 6) LTR91|LTR|ERVL 44056 NM_001282658 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr20-1801 chr20 62368693 62368903 + 10.3 0.000 Intergenic Intergenic -1486 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr3-10429 chr3 131454520 131454730 + 10.3 0.000 Intergenic MIRb|SINE|MIR 24608 NR_002985 677836 Hs.735762 NR_002985 SNORA58 ACA58|SNORA58B small nucleolar RNA, H/ACA box 58 snoRNA chr14-2116 chr14 74834824 74835034 + 10.3 0.000 intron (NM_019589, intron 19 of 20) intron (NM_019589, intron 19 of 20) 28905 NM_001243007 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding chr7-3246 chr7 2143607 2143817 + 10.3 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -54660 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr4-4777 chr4 100671759 100671969 + 10.3 0.000 intron (NR_046811, intron 2 of 3) MIR|SINE|MIR 3249 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr1-6893 chr1 119210085 119210295 + 10.3 0.000 intron (NR_125975, intron 4 of 6) intron (NR_125975, intron 4 of 6) -69518 NM_015836 10352 Hs.523506 NM_015836 ENSG00000116874 WARS2 NEMMLAS|TrpRS|mtTrpRS tryptophanyl tRNA synthetase 2, mitochondrial protein-coding chr5-3051 chr5 25006833 25007043 + 10.3 0.000 Intergenic Intergenic -166355 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA chr15-1695 chr15 62464898 62465108 + 10.3 0.000 Intergenic Intergenic 121974 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr21-498 chr21 28283720 28283930 + 10.3 0.000 Intergenic Intergenic -55158 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr12-2520 chr12 93428411 93428621 + 10.3 0.000 intron (NM_003348, intron 1 of 3) intron (NM_003348, intron 1 of 3) 13431 NM_003348 7334 Hs.524630 NM_003348 ENSG00000177889 UBE2N HEL-S-71|UBC13|UBCHBEN; UBC13|UbcH-ben|UbcH13 ubiquitin conjugating enzyme E2 N protein-coding chr8-2255 chr8 69152735 69152945 + 10.3 0.000 Intergenic Intergenic -48650 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr20-1319 chr20 62827268 62827478 + 10.3 0.000 intron (NM_001853, intron 16 of 31) intron (NM_001853, intron 16 of 31) 10323 NM_001853 1299 Hs.716639 NM_001853 ENSG00000092758 COL9A3 DJ885L7.4.1|EDM3|IDD|MED collagen type IX alpha 3 chain protein-coding chr11-3749 chr11 36542365 36542575 + 10.3 0.000 Intergenic Intergenic -25543 NM_000448 5896 Hs.73958 NM_000448 ENSG00000166349 RAG1 RAG-1|RNF74 recombination activating 1 protein-coding chr19-5039 chr19 48852827 48853037 + 10.3 0.000 intron (NM_020904, intron 12 of 19) AluSz|SINE|Alu 15685 NM_001161354 57664 Hs.9469 NM_020904 ENSG00000105559 PLEKHA4 PEPP1 pleckstrin homology domain containing A4 protein-coding chr2-6505 chr2 187217926 187218136 + 10.3 0.000 Intergenic Intergenic 230221 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr13-988 chr13 50082732 50082942 + 10.3 0.000 promoter-TSS (NR_152572) promoter-TSS (NR_152572) 668 NR_109973 10301 Hs.591229 NM_005887 ENSG00000176124 DLEU1 BCMS|BCMS1|DLB1|DLEU2|LEU1|LEU2|LINC00021|NCRNA00021|XTP6 deleted in lymphocytic leukemia 1 ncRNA chr19-3017 chr19 48589072 48589282 + 10.3 0.000 intron (NM_177973, intron 3 of 6) L2a|LINE|L2 13441 NM_004605 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr14-3437 chr14 98936893 98937103 + 10.3 0.000 Intergenic Intergenic 225385 NR_161368 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr13-3989 chr13 66749120 66749330 + 10.3 0.000 intron (NM_020403, intron 2 of 3) intron (NM_020403, intron 2 of 3) -75944 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr7-5433 chr7 37076786 37076996 + 10.3 0.000 intron (NM_001206480, intron 15 of 21) intron (NM_001206480, intron 15 of 21) 79095 NR_104120 100861514 Hs.627775 NR_104120 ENSG00000224101 ELMO1-AS1 - ELMO1 antisense RNA 1 ncRNA chr2-5165 chr2 29030687 29030897 + 10.3 0.000 intron (NM_001321538, intron 13 of 18) intron (NM_001321538, intron 13 of 18) 43731 NM_001029883 388939 Hs.354243 NM_001029883 ENSG00000179270 PCARE C2orf71|RP54 photoreceptor cilium actin regulator protein-coding chr11-2236 chr11 70661857 70662067 + 10.3 0.000 promoter-TSS (NR_110766) promoter-TSS (NR_110766) -121 NR_110766 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr12-2477 chr12 65801109 65801319 + 10.3 0.000 intron (NR_026825, intron 1 of 1) intron (NR_026825, intron 1 of 1) -23246 NM_003484 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding chr11-2367 chr11 125165510 125165720 + 10.3 0.000 intron (NM_022062, intron 1 of 12) CpG 864 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr5-2707 chr5 96079129 96079339 + 10.3 0.000 promoter-TSS (NR_030309) promoter-TSS (NR_030309) 96 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr8-1222 chr8 115333914 115334124 + 10.3 0.000 Intergenic LTR16E1|LTR|ERVL 333994 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chrX-693 chrX 48952969 48953179 + 10.3 0.000 intron (NM_001136159, intron 1 of 8) intron (NM_001136159, intron 1 of 8) 4533 NM_001136157 55593 Hs.496098 NM_017602 ENSG00000068308 OTUD5 DUBA OTU deubiquitinase 5 protein-coding chr3-8744 chr3 429989 430199 + 10.3 0.000 Intergenic Intergenic -44299 NR_110739 101927193 Hs.677744 NR_110739 ENSG00000234661 CHL1-AS1 - CHL1 antisense RNA 1 ncRNA chr16-3423 chr16 86290743 86290953 + 10.3 0.000 intron (NR_038438, intron 2 of 2) intron (NR_038438, intron 2 of 2) 4417 NR_038438 146513 Hs.434338 NR_038438 ENSG00000268532 LINC02135 - long intergenic non-protein coding RNA 2135 ncRNA chr14-1058 chr14 66624481 66624691 + 10.3 0.000 intron (NM_001024218, intron 1 of 21) HERVL40-int|LTR|ERVL 117179 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr8-3680 chr8 17202586 17202796 + 10.3 0.000 intron (NM_016353, intron 6 of 12) intron (NM_016353, intron 6 of 12) 43767 NM_001322089 29883 Hs.587465 NM_013354 ENSG00000198791 CNOT7 CAF-1|CAF1|Caf1a|hCAF-1 CCR4-NOT transcription complex subunit 7 protein-coding chr3-10427 chr3 131402058 131402268 + 10.3 0.000 Intergenic L1MEh|LINE|L1 20389 NM_152395 131870 Hs.282050 NM_152395 ENSG00000198585 NUDT16 - nudix hydrolase 16 protein-coding chr6-3246 chr6 146464059 146464269 + 10.3 0.000 Intergenic Intergenic -79669 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr3-3737 chr3 195250996 195251206 + 10.3 0.000 intron (NM_152531, intron 1 of 3) intron (NM_152531, intron 1 of 3) -3181 NM_001308069 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr14-789 chr14 68816559 68816769 + 10.3 0.000 Intergenic CpG -20421 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr18-2536 chr18 78724829 78725039 + 10.3 0.000 Intergenic Intergenic -255341 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr3-1888 chr3 141788893 141789103 + 10.3 0.000 intron (NM_139209, intron 2 of 3) AluSx1|SINE|Alu 10797 NM_139209 131890 Hs.680654 NM_139209 ENSG00000114124 GRK7 GPRK7 G protein-coupled receptor kinase 7 protein-coding chr2-8146 chr2 82909624 82909834 + 10.3 0.000 Intergenic MSTA|LTR|ERVL-MaLR 52926 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chrX-763 chrX 24243680 24243890 + 10.3 0.000 Intergenic L1ME3Cz|LINE|L1 69608 NM_001136233 170067 Hs.716893 NM_001136233 SUPT20HL2 FAM48B1|FAM48B2 SUPT20H like 2 protein-coding chr18-1312 chr18 73118207 73118417 + 10.3 0.000 Intergenic Intergenic 146186 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA chr11-7139 chr11 126008895 126009105 + 10.3 0.000 intron (NM_016952, intron 8 of 19) MIR|SINE|MIR 54292 NM_001243597 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr11-4461 chr11 102552538 102552748 + 10.3 0.000 Intergenic Intergenic -21896 NM_002423 4316 Hs.2256 NM_002423 ENSG00000137673 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 protein-coding chrX-1299 chrX 118770190 118770400 + 10.3 0.000 intron (NM_001560, intron 8 of 10) intron (NM_001560, intron 8 of 10) 42689 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr13-1241 chr13 94595552 94595762 + 10.3 0.000 intron (NM_014305, intron 1 of 11) intron (NM_014305, intron 1 of 11) 495 NM_001304430 23483 Hs.12393 NM_014305 ENSG00000088451 TGDS CATMANS|SDR2E1|TDPGD TDP-glucose 4,6-dehydratase protein-coding chr7-8849 chr7 87930881 87931091 + 10.3 0.000 Intergenic L1PB1|LINE|L1 -3157 NM_004194 53616 Hs.256398 NM_004194 ENSG00000008277 ADAM22 ADAM 22|EIEE61|MDC2 ADAM metallopeptidase domain 22 protein-coding chr1-6989 chr1 165659630 165659840 + 10.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 28501 NM_004528 4259 Hs.191734 NM_004528 ENSG00000143198 MGST3 GST-III microsomal glutathione S-transferase 3 protein-coding chr13-1960 chr13 109628057 109628267 + 10.3 0.000 Intergenic Intergenic -100112 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr8-1928 chr8 40874105 40874315 + 10.3 0.000 intron (NM_024645, intron 1 of 6) intron (NM_024645, intron 1 of 6) 23616 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr9-2930 chr9 135448928 135449138 + 10.3 0.000 Intergenic Intergenic 23216 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr13-934 chr13 93244260 93244470 + 10.3 0.000 intron (NM_005708, intron 1 of 8) L1PBa|LINE|L1 17558 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr2-8287 chr2 102464380 102464590 + 10.3 0.000 Intergenic Intergenic -8741 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding chr19-2249 chr19 49921964 49922174 + 10.3 0.000 intron (NM_001193357, intron 1 of 1) MER90a|LTR|ERV1 -6633 NM_012068 22809 Hs.9754 NM_012068 ENSG00000169136 ATF5 ATFX|HMFN0395 activating transcription factor 5 protein-coding chr5-2861 chr5 78586212 78586422 + 10.3 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 62455 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr2-8475 chr2 126003249 126003459 + 10.3 0.000 Intergenic Intergenic 114631 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr2-5063 chr2 7539809 7540019 + 10.3 0.000 Intergenic L1PB1|LINE|L1 118653 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr7-4826 chr7 100926356 100926566 + 10.3 0.000 Intergenic HERVH-int|LTR|ERV1 -23073 NM_005960 4584 Hs.703577 NM_005960 ENSG00000169894 MUC3A MUC-3A|MUC3 mucin 3A, cell surface associated protein-coding chr12-5483 chr12 124938703 124938913 + 10.3 0.000 Intergenic LTR10E|LTR|ERV1 23261 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr1-10757 chr1 200321035 200321245 + 10.3 0.000 Intergenic Intergenic 52652 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr5-6060 chr5 409504 409714 + 10.3 0.000 intron (NM_020731, intron 4 of 11) L1ME2|LINE|L1 33551 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr1-4805 chr1 20406378 20406588 + 10.3 0.000 intron (NR_033887, intron 1 of 11) intron (NR_033887, intron 1 of 11) 22311 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr3-2012 chr3 30970150 30970360 + 10.3 0.000 Intergenic Intergenic -75594 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr17-5595 chr17 47857201 47857411 + 10.3 0.000 Intergenic Intergenic -1609 NM_199262 80320 Hs.253603 NM_199262 ENSG00000189120 SP6 EPFN|EPIPROFIN|KLF14 Sp6 transcription factor protein-coding chr16-1394 chr16 85663640 85663850 + 10.3 0.000 intron (NM_001278184, intron 10 of 14) intron (NM_001278184, intron 10 of 14) 25209 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr1-6716 chr1 58266125 58266335 + 10.3 0.000 Intergenic Intergenic -15683 NM_001353980 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr1-4500 chr1 24929155 24929365 + 10.3 0.000 intron (NM_001320672, intron 3 of 6) CpG 1016 NM_004350 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr13-1518 chr13 21843380 21843590 + 10.3 0.000 Intergenic Intergenic 34675 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr1-14410 chr1 44692205 44692415 + 10.3 0.000 intron (NM_001145636, intron 2 of 11) L2b|LINE|L2 17596 NM_001145636 339541 Hs.173679 NM_001004307 ENSG00000198520 ARMH1 C1orf228|NCRNA00082|p40 armadillo like helical domain containing 1 protein-coding chr6-7595 chr6 75795127 75795337 + 10.3 0.000 intron (NM_001368139, intron 2 of 9) intron (NM_001368139, intron 2 of 9) 45993 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr20-1690 chr20 35312473 35312683 + 10.3 0.000 intron (NM_199487, intron 7 of 8) intron (NM_199487, intron 7 of 8) -20153 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr4-3430 chr4 79889378 79889588 + 10.3 0.000 Intergenic L1PA7|LINE|L1 62012 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr1-4906 chr1 39189679 39189889 + 10.3 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 105617 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr8-5333 chr8 5933145 5933355 + 10.3 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 473298 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr3-3489 chr3 1600602 1600812 + 10.3 0.000 Intergenic MER52A|LTR|ERV1 -498096 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr2-2762 chr2 217085950 217086160 + 10.3 0.000 Intergenic Intergenic -196678 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr5-5428 chr5 137114870 137115080 + 10.3 0.000 intron (NM_004598, intron 4 of 10) intron (NM_004598, intron 4 of 10) -13222 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr20-2335 chr20 11153996 11154206 + 10.3 0.000 Intergenic Intergenic 119282 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr19-3832 chr19 11544132 11544342 + 10.3 0.000 intron (NM_001308341, intron 3 of 7) L2a|LINE|L2 5386 NM_001308342 1264 Hs.465929 NM_001299 ENSG00000130176 CNN1 HEL-S-14|SMCC|Sm-Calp calponin 1 protein-coding chr4-4368 chr4 39795703 39795913 + 10.3 0.000 Intergenic FRAM|SINE|Alu 97672 NM_001312647 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr7-926 chr7 1827532 1827742 + 10.3 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) 16616 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr18-3168 chr18 42900536 42900746 + 10.3 0.000 intron (NM_002930, intron 4 of 4) intron (NM_002930, intron 4 of 4) 215044 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr2-2456 chr2 86453857 86454067 + 10.3 0.000 intron (NM_018433, intron 4 of 25) intron (NM_018433, intron 4 of 25) 12501 NM_001146688 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr5-9075 chr5 171601925 171602135 + 10.3 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 182383 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr15-3271 chr15 76913354 76913564 + 10.3 0.000 Intergenic ERVL-E-int|LTR|ERVL -8119 NR_148227 49855 Hs.458986 NM_020843 ENSG00000140386 SCAPER IDDRP|MSTP063|ZNF291|Zfp291 S-phase cyclin A associated protein in the ER protein-coding chr15-1150 chr15 66574288 66574498 + 10.3 0.000 Intergenic Intergenic -7797 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr9-5714 chr9 125255338 125255548 + 10.3 0.000 Intergenic AluJo|SINE|Alu -6383 NM_001354295 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr9-7691 chr9 71689984 71690194 + 10.3 0.000 intron (NM_013390, intron 22 of 23) intron (NM_013390, intron 22 of 23) 78424 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr10-6337 chr10 121687300 121687510 + 10.3 0.000 Intergenic Intergenic -88947 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr10-2092 chr10 119499425 119499635 + 10.3 0.000 TTS (NM_002925) TTS (NM_002925) 37003 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr18-2740 chr18 76634458 76634668 + 10.3 0.000 intron (NR_110784, intron 4 of 4) intron (NR_110784, intron 4 of 4) 4448 NR_110784 101927651 Hs.569848 NR_110784 LINC01927 - long intergenic non-protein coding RNA 1927 ncRNA chr18-2400 chr18 4848530 4848740 + 10.3 0.000 Intergenic L2c|LINE|L2 -232547 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA chrX-2242 chrX 46298907 46299117 + 10.3 0.000 Intergenic Intergenic 28662 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr1-6146 chr1 171655388 171655598 + 10.3 0.000 Intergenic Intergenic -2805 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr2-7516 chr2 20490386 20490596 + 10.3 0.000 intron (NR_157978, intron 1 of 3) L2b|LINE|L2 11033 NR_157978 107985856 NR_157978 LOC107985856 - uncharacterized LOC107985856 ncRNA chr8-6740 chr8 88281288 88281498 + 10.3 0.000 intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 46090 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr13-3954 chr13 61352836 61353046 + 10.3 0.000 Intergenic LTR40b|LTR|ERVL 62581 NM_022843 64881 Hs.391781 NM_022843 ENSG00000280165 PCDH20 PCDH13 protocadherin 20 protein-coding chr10-3163 chr10 76676219 76676429 + 10.3 0.000 Intergenic Intergenic -211720 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr3-7146 chr3 185341799 185342009 + 10.3 0.000 intron (NM_001242317, intron 2 of 12) MER58A|DNA|hAT-Charlie -21232 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr4-2202 chr4 126939547 126939757 + 10.3 0.000 Intergenic HAL1ME|LINE|L1 -693305 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chrX-3015 chrX 57859501 57859711 + 10.3 0.000 Intergenic L1PA7|LINE|L1 51027 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr6-1774 chr6 81476994 81477204 + 10.3 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 275582 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr1-7797 chr1 50399121 50399331 + 10.3 0.000 Intergenic Intergenic 24217 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr17-8057 chr17 51245672 51245882 + 10.3 0.000 intron (NM_017643, intron 2 of 16) L1MC4|LINE|L1 14272 NM_017643 54799 Hs.656803 NM_017643 ENSG00000011258 MBTD1 SA49P01 mbt domain containing 1 protein-coding chr13-2537 chr13 62408379 62408589 + 10.3 0.000 Intergenic L1MA9|LINE|L1 84827 NR_047038 100874180 Hs.7415 NR_047038 ENSG00000229307 LINC00459 - long intergenic non-protein coding RNA 459 ncRNA chr7-3647 chr7 43968665 43968875 + 10.3 0.000 intron (NR_003655, intron 10 of 15) intron (NR_003655, intron 10 of 15) -32120 NM_175064 285955 Hs.645483 NM_175064 ENSG00000136206 SPDYE1 Ringo1|SPDYB2L2|SPDYE|WBSCR19 speedy/RINGO cell cycle regulator family member E1 protein-coding chr11-5187 chr11 10109812 10110022 + 10.3 0.000 intron (NM_030962, intron 2 of 39) intron (NM_030962, intron 2 of 39) 184290 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr9-6074 chr9 137117316 137117526 + 10.3 0.000 Intergenic Intergenic -2688 NM_013379 29952 Hs.37916 NM_013379 ENSG00000176978 DPP7 DPP2|DPPII|QPP dipeptidyl peptidase 7 protein-coding chr13-1798 chr13 30969084 30969294 + 10.3 0.000 intron (NM_152325, intron 6 of 6) intron (NM_152325, intron 6 of 6) 36533 NM_001353388 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr15-1929 chr15 89680519 89680729 + 10.3 0.000 TTS (NM_003847) TTS (NM_003847) -1257 NM_002666 5346 Hs.103253 NM_002666 ENSG00000166819 PLIN1 FPLD4|PERI|PLIN perilipin 1 protein-coding chr10-3049 chr10 128169530 128169740 + 10.3 0.000 Intergenic Intergenic -43212 NM_002417 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chr1-7686 chr1 21221043 21221253 + 10.3 0.000 intron (NM_001113347, intron 16 of 16) intron (NM_001113347, intron 16 of 16) -44251 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr9-7581 chr9 36154584 36154794 + 10.3 0.000 intron (NM_001287013, intron 4 of 4) intron (NM_001287013, intron 4 of 4) -14699 NM_005893 881 Hs.115460 NM_005893 ENSG00000185972 CCIN BTBD20|KBTBD14 calicin protein-coding chr2-6905 chr2 100786167 100786377 + 10.3 0.000 Intergenic Intergenic -33867 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr1-1984 chr1 236065052 236065262 + 10.3 0.000 promoter-TSS (NM_002508) promoter-TSS (NM_002508) -67 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr16-5541 chr16 27457145 27457355 + 10.3 0.000 Intergenic Intergenic -3857 NR_037158 283888 Hs.660935 NR_037158 ENSG00000259954 IL21R-AS1 - IL21R antisense RNA 1 ncRNA chr5-8846 chr5 151659695 151659905 + 10.3 0.000 Intergenic MIRb|SINE|MIR -17145 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr16-2471 chr16 87622802 87623012 + 10.3 0.000 intron (NM_020655, intron 1 of 4) intron (NM_020655, intron 1 of 4) 20399 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr6-6084 chr6 145251306 145251516 + 10.3 0.000 Intergenic Intergenic 435466 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr17-2156 chr17 44368906 44369116 + 10.3 0.000 Intergenic LTR12C|LTR|ERV1 -5158 NM_198475 284069 Hs.154001 NM_198475 ENSG00000161682 FAM171A2 - family with sequence similarity 171 member A2 protein-coding chr20-1433 chr20 42688984 42689194 + 10.3 0.000 TTS (NR_110004) TTS (NR_110004) 3606 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr1-6266 chr1 244934924 244935134 + 10.3 0.000 Intergenic Intergenic -34840 NM_032328 84288 Hs.134857 NM_032328 ENSG00000203666 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding chr5-2058 chr5 132259395 132259605 + 10.3 0.000 intron (NM_001131027, intron 1 of 5) intron (NM_001131027, intron 1 of 5) 1804 NM_003687 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr1-12571 chr1 30923771 30923981 + 10.3 0.000 Intergenic AluJb|SINE|Alu 11900 NR_004054 692234 NR_004054 SNORD103A U103 small nucleolar RNA, C/D box 103A snoRNA chrX-3534 chrX 53580275 53580485 + 10.3 0.000 intron (NM_031407, intron 43 of 83) L1MC4|LINE|L1 -23106 NR_029484 406889 NR_029484 ENSG00000208012 MIRLET7F2 LET7F2|MIRNLET7F2|let-7f-2 microRNA let-7f-2 ncRNA chr2-2778 chr2 238263323 238263533 + 10.3 0.000 intron (NM_022817, intron 9 of 22) intron (NM_022817, intron 9 of 22) -23390 NM_001282434 55502 Hs.42949 NM_018645 ENSG00000144485 HES6 C-HAIRY1|HES-6|bHLHb41|bHLHc23 hes family bHLH transcription factor 6 protein-coding chr4-4161 chr4 8196349 8196559 + 10.3 0.000 Intergenic Intergenic -2836 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr6-2232 chr6 45001816 45002026 + 10.3 0.000 intron (NM_181356, intron 8 of 12) intron (NM_181356, intron 8 of 12) 195849 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr2-1798 chr2 26587182 26587392 + 10.3 0.000 intron (NM_001029881, intron 4 of 6) AluY|SINE|Alu 24700 NM_001322426 339778 Hs.407083 NM_001105519 ENSG00000173557 C2orf70 - chromosome 2 open reading frame 70 protein-coding chr20-4388 chr20 57805366 57805576 + 10.3 0.000 Intergenic L2a|LINE|L2 -93935 NM_199171 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr18-2195 chr18 61400831 61401041 + 10.3 0.000 intron (NM_031891, intron 1 of 11) intron (NM_031891, intron 1 of 11) 67506 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr11-4210 chr11 63272517 63272727 + 10.3 0.000 Intergenic ERVL47-int|LTR|ERVL -17281 NR_134874 387775 Hs.188982 NM_001039752 ENSG00000184999 SLC22A10 OAT5|hOAT5 solute carrier family 22 member 10 protein-coding chr5-3768 chr5 61821561 61821771 + 10.3 0.000 Intergenic Intergenic -85968 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr7-3040 chr7 108503556 108503766 + 10.3 0.000 intron (NM_001256010, intron 3 of 9) L1MEg1|LINE|L1 22474 NM_001256009 50640 Hs.617340 NM_015723 ENSG00000135241 PNPLA8 IPLA2-2|IPLA2G|MMLA|PNPLA-gamma|iPLA2gamma patatin like phospholipase domain containing 8 protein-coding chr4-1433 chr4 76194475 76194685 + 10.3 0.000 intron (NM_005506, intron 2 of 11) intron (NM_005506, intron 2 of 11) 19244 NM_001204255 950 Hs.349656 NM_005506 ENSG00000138760 SCARB2 AMRF|CD36L2|EPM4|HLGP85|LGP85|LIMP-2|LIMPII|SR-BII scavenger receptor class B member 2 protein-coding chr10-8047 chr10 64191693 64191903 + 10.3 0.000 Intergenic Intergenic -633730 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr22-2138 chr22 38132713 38132923 + 10.3 0.000 intron (NM_001199562, intron 7 of 15) CpG -22134 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr19-4120 chr19 18073703 18073913 + 10.3 0.000 intron (NM_001290024, intron 8 of 17) intron (NM_001290024, intron 8 of 17) 13126 NM_153701 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr13-2274 chr13 28268902 28269112 + 10.3 0.000 intron (NM_175854, intron 12 of 18) intron (NM_175854, intron 12 of 18) -129833 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr2-6911 chr2 105557919 105558129 + 10.3 0.000 Intergenic LTR65|LTR|ERV1 52535 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chr11-4781 chr11 131889206 131889416 + 10.3 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -20613 NM_001352009 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr11-7567 chr11 26418362 26418572 + 10.1 0.000 intron (NM_031418, intron 1 of 26) intron (NM_031418, intron 1 of 26) -55435 NM_001313727 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chrX-2283 chrX 50807900 50808110 + 10.1 0.000 intron (NR_027121, intron 1 of 9) CR1-3_Croc|LINE|CR1 6039 NM_020717 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding chr9-5026 chr9 27365915 27366125 + 10.1 0.000 intron (NM_024761, intron 2 of 3) intron (NM_024761, intron 2 of 3) -68870 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chr1-10285 chr1 149885460 149885670 + 10.1 0.000 3' UTR (NM_003528, exon 1 of 1) 3' UTR (NM_003528, exon 1 of 1) 1117 NM_003528 8349 Hs.2178 NM_003528 ENSG00000184678 HIST2H2BE GL105|H2B|H2B.1|H2BFQ|H2BGL105|H2BQ histone cluster 2 H2B family member e protein-coding chr11-4277 chr11 66376703 66376913 + 10.1 0.000 Intergenic L1MC2|LINE|L1 -4332 NM_001300868 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chrX-1807 chrX 92073502 92073712 + 10.1 0.000 intron (NM_001168362, intron 2 of 4) intron (NM_001168362, intron 2 of 4) 238146 NM_001168362 27328 Hs.655673 NM_014522 ENSG00000102290 PCDH11X PCDH-X|PCDH-Y|PCDH11|PCDH11Y|PCDH22|PCDHX|PPP1R119 protocadherin 11 X-linked protein-coding chr14-4180 chr14 82806139 82806349 + 10.1 0.000 Intergenic Intergenic 163612 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr1-6720 chr1 60390173 60390383 + 10.1 0.000 Intergenic MIRc|SINE|MIR 232407 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr16-3602 chr16 77272230 77272440 + 10.1 0.000 Intergenic Intergenic 72927 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding chr6-4735 chr6 67294994 67295204 + 10.1 0.000 Intergenic L1PA7|LINE|L1 -760252 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr2-5944 chr2 34100184 34100394 + 10.1 0.000 intron (NR_126403, intron 4 of 5) intron (NR_126403, intron 4 of 5) 33063 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr1-9252 chr1 24217505 24217715 + 10.1 0.000 Intergenic MamTip2|DNA|hAT-Tip100 17370 NR_027087 284632 Hs.638906 NR_027087 ENSG00000230023 LINC02800 - long intergenic non-protein coding RNA 2800 ncRNA chr7-4692 chr7 43875416 43875626 + 10.1 0.000 TTS (NM_017920) TTS (NM_017920) -6004 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr12-3075 chr12 11389395 11389605 + 10.1 0.000 intron (NM_001367912, intron 4 of 7) intron (NM_001367912, intron 4 of 7) 6066 NM_001367912 5542 Hs.631726 NM_005039 ENSG00000251655 PRB1 PM|PMF|PMS|PRB1L|PRB1M proline rich protein BstNI subfamily 1 (gene/pseudogene) protein-coding chr2-14200 chr2 207945264 207945474 + 10.1 0.000 intron (NM_001080475, intron 4 of 7) intron (NM_001080475, intron 4 of 7) 80158 NM_001080475 389072 Hs.159188 NM_001080475 ENSG00000178385 PLEKHM3 DAPR|PLEKHM1L pleckstrin homology domain containing M3 protein-coding chr14-3406 chr14 95691835 95692045 + 10.1 0.000 3' UTR (NM_004918, exon 4 of 4) 3' UTR (NM_004918, exon 4 of 4) 5514 NM_004918 9623 Hs.632346 NM_004918 ENSG00000213231 TCL1B SYN-1|TML1 T cell leukemia/lymphoma 1B protein-coding chr4-4425 chr4 48916770 48916980 + 10.1 0.000 Intergenic L1MC1|LINE|L1 -10047 NM_152398 132299 Hs.95835 NM_152398 ENSG00000145247 OCIAD2 - OCIA domain containing 2 protein-coding chr18-1690 chr18 79761513 79761723 + 10.1 0.000 Intergenic L1MB7|LINE|L1 80188 NM_001202504 9150 Hs.465490 NM_004715 ENSG00000060069 CTDP1 CCFDN|FCP1 CTD phosphatase subunit 1 protein-coding chr4-4986 chr4 134559870 134560080 + 10.1 0.000 Intergenic MER54A|LTR|ERVL 136107 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr6-4805 chr6 79346113 79346323 + 10.1 0.000 Intergenic Intergenic -32834 NR_130915 80078 NR_130915 ENSG00000286042 LCAL1 onco-lncRNA-27 lung cancer associated lncRNA 1 ncRNA chr17-6431 chr17 6733294 6733504 + 10.1 0.000 Intergenic HERVH-int|LTR|ERV1 -19978 NM_177550 284111 Hs.399496 NM_177550 ENSG00000141485 SLC13A5 EIEE25|INDY|NACT|mIndy solute carrier family 13 member 5 protein-coding chr1-5176 chr1 169931977 169932187 + 10.1 0.000 intron (NM_014970, intron 19 of 19) intron (NM_014970, intron 19 of 19) -38123 NM_181093 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr5-5185 chr5 111668753 111668963 + 10.1 0.000 intron (NR_040093, intron 1 of 6) intron (NR_040093, intron 1 of 6) 87393 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr18-1977 chr18 39239814 39240024 + 10.1 0.000 intron (NR_024391, intron 3 of 3) intron (NR_024391, intron 3 of 3) 382256 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr12-7238 chr12 51465183 51465393 + 10.1 0.000 intron (NM_001039960, intron 11 of 24) intron (NM_001039960, intron 11 of 24) 40171 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr20-1729 chr20 43894491 43894701 + 10.1 0.000 promoter-TSS (NR_134577) promoter-TSS (NR_134577) -122 NR_134577 105372626 Hs.130555 NR_134577 ENSG00000233277 LINC01728 - long intergenic non-protein coding RNA 1728 ncRNA chrX-2651 chrX 112703931 112704141 + 10.1 0.000 Intergenic L1MA4|LINE|L1 -24098 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr2-13853 chr2 177500011 177500221 + 10.1 0.000 intron (NM_003659, intron 14 of 19) intron (NM_003659, intron 14 of 19) 52680 NM_152517 150737 Hs.447659 NM_152517 ENSG00000196659 TTC30B IFT70|IFT70B|fleer tetratricopeptide repeat domain 30B protein-coding chr12-3102 chr12 22543842 22544052 + 10.1 0.000 intron (NM_001286176, intron 2 of 26) CpG 250 NM_001286174 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding chr9-2590 chr9 137343218 137343428 + 10.1 0.000 intron (NM_017820, intron 17 of 21) ERVL-B4-int|LTR|ERVL -41052 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr2-2407 chr2 26946505 26946715 + 10.1 0.000 intron (NM_020134, intron 12 of 12) intron (NM_020134, intron 12 of 12) -24027 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chrX-4888 chrX 107033057 107033267 + 10.1 0.000 Intergenic AluSq2|SINE|Alu -32950 NM_001085354 79710 Hs.496544 NM_024657 ENSG00000133131 MORC4 ZCW4|ZCWCC2|dJ75H8.2 MORC family CW-type zinc finger 4 protein-coding chr2-3045 chr2 85298771 85298981 + 10.1 0.000 intron (NM_031283, intron 4 of 11) intron (NM_031283, intron 4 of 11) 29113 NM_001206840 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr4-5113 chr4 149550003 149550213 + 10.1 0.000 intron (NM_001363507, intron 11 of 13) LTR16C|LTR|ERVL 265735 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr9-5896 chr9 132386784 132386994 + 10.1 0.000 intron (NR_134525, intron 8 of 10) intron (NR_134525, intron 8 of 10) 19951 NR_134525 7270 Hs.54780 NM_007344 ENSG00000125482 TTF1 TTF-1|TTF-I transcription termination factor 1 protein-coding chr16-3120 chr16 70637664 70637874 + 10.1 0.000 intron (NM_001172772, intron 1 of 6) intron (NM_001172772, intron 1 of 6) 13777 NM_001172772 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr12-5461 chr12 124206576 124206786 + 10.1 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -82483 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr10-2574 chr10 71431836 71432046 + 10.1 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 35007 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr14-2501 chr14 103087765 103087975 + 10.1 0.000 intron (NM_001330236, intron 2 of 3) intron (NM_001330236, intron 2 of 3) 3660 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chr11-1195 chr11 111878915 111879125 + 10.1 0.000 promoter-TSS (NM_001330371) promoter-TSS (NM_001330371) 145 NM_138378 91893 Hs.697132 NM_138378 ENSG00000255561 FDXACB1 hCG_2033039 ferredoxin-fold anticodon binding domain containing 1 protein-coding chr16-2052 chr16 67556470 67556680 + 10.1 0.000 Intergenic AluJo|SINE|Alu 5734 NR_158165 107984813 Hs.385760 NR_158165 LOC107984813 - uncharacterized LOC107984813 ncRNA chr3-6935 chr3 159404013 159404223 + 10.1 0.000 intron (NM_001197108, intron 1 of 6) L1MA3|LINE|L1 121472 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr12-3003 chr12 123363500 123363710 + 10.1 0.000 intron (NM_018183, intron 1 of 31) intron (NM_018183, intron 1 of 31) 1238 NR_107039 102466877 NR_107039 ENSG00000284425 MIR8072 hsa-mir-8072 microRNA 8072 ncRNA chr2-3297 chr2 95992635 95992845 + 10.1 0.000 promoter-TSS (NM_001310154) promoter-TSS (NM_001310154) -916 NM_001310154 400986 Hs.646318 NM_001010914 ENSG00000174501 ANKRD36C - ankyrin repeat domain 36C protein-coding chr17-3833 chr17 42859337 42859547 + 10.1 0.000 Intergenic Intergenic 6199 NM_001277732 8639 Hs.198241 NM_003734 ENSG00000131471 AOC3 HPAO|SSAO|VAP-1|VAP1 amine oxidase copper containing 3 protein-coding chr4-2540 chr4 71117770 71117980 + 10.1 0.000 Intergenic AluSp|SINE|Alu -69384 NM_001098484 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr7-2567 chr7 111438991 111439201 + 10.1 0.000 intron (NM_001350961, intron 4 of 7) intron (NM_001350961, intron 4 of 7) 123195 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr2-3924 chr2 55156335 55156545 + 10.1 0.000 Intergenic L2b|LINE|L2 -18609 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr11-8676 chr11 4095935 4096145 + 10.1 0.000 intron (NM_001318064, intron 1 of 17) intron (NM_001318064, intron 1 of 17) 1241 NM_001033 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr5-4338 chr5 160970644 160970854 + 10.1 0.000 Intergenic Intergenic -32123 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr22-1698 chr22 50142856 50143066 + 10.1 0.000 intron (NM_018995, intron 16 of 26) intron (NM_018995, intron 16 of 26) -4094 NM_001164106 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chr2-7797 chr2 43871062 43871272 + 10.1 0.000 intron (NM_001357321, intron 6 of 12) intron (NM_001357321, intron 6 of 12) 32196 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr2-5779 chr2 224837780 224837990 + 10.1 0.000 intron (NM_001290263, intron 24 of 55) intron (NM_001290263, intron 24 of 55) 109164 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr20-2815 chr20 57861827 57862037 + 10.1 0.000 Intergenic Charlie1|DNA|hAT-Charlie -141972 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr20-2375 chr20 17501624 17501834 + 10.1 0.000 intron (NM_001195, intron 5 of 7) MLT1O|LTR|ERVL-MaLR 29650 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr19-4086 chr19 14346735 14346945 + 10.1 0.000 intron (NR_134908, intron 1 of 3) AluSz|SINE|Alu 13097 NR_134916 101928845 Hs.531617 NR_134916 ENSG00000267147 LINC01842 - long intergenic non-protein coding RNA 1842 ncRNA chr9-4875 chr9 3749282 3749492 + 10.1 0.000 Intergenic L1ME3B|LINE|L1 81301 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chr3-5397 chr3 157495095 157495305 + 10.1 0.000 intron (NM_024621, intron 2 of 13) intron (NM_024621, intron 2 of 13) 306 NM_001167917 79674 Hs.658046 NM_024621 ENSG00000197415 VEPH1 MELT|VEPH ventricular zone expressed PH domain containing 1 protein-coding chr22-1329 chr22 17778089 17778299 + 10.1 0.000 non-coding (NR_103718, exon 1 of 1) non-coding (NR_103718, exon 1 of 1) 904 NR_103718 200298 Hs.517397 NR_103718 ENSG00000269220 LINC00528 C22orf37 long intergenic non-protein coding RNA 528 ncRNA chr8-1908 chr8 30476556 30476766 + 10.1 0.000 intron (NM_001008710, intron 2 of 8) intron (NM_001008710, intron 2 of 8) -91260 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr11-4039 chr11 11707072 11707282 + 10.1 0.000 Intergenic MIR|SINE|MIR -50455 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr13-1953 chr13 100764758 100764968 + 10.1 0.000 intron (NR_047687, intron 2 of 7) intron (NR_047687, intron 2 of 7) 56538 NR_047687 100885778 Hs.602949 NR_047687 ENSG00000233009 NALCN-AS1 - NALCN antisense RNA 1 ncRNA chr20-4356 chr20 55933476 55933686 + 10.1 0.000 Intergenic Intergenic 71938 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr1-8993 chr1 10433460 10433670 + 10.1 0.000 intron (NR_037187, intron 1 of 2) intron (NR_037187, intron 1 of 2) 2815 NM_001243768 100526739 Hs.412311 NM_198544 ENSG00000251503 CENPS-CORT APITD1|APITD1-CORT|CENP-S|CENPS|FAAP16|MHF1 CENPS-CORT readthrough protein-coding chr4-5051 chr4 142278138 142278348 + 10.1 0.000 intron (NM_001331040, intron 9 of 25) L1ME1|LINE|L1 568292 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr1-5749 chr1 110527037 110527247 + 10.1 0.000 Intergenic Intergenic -7967 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr1-10645 chr1 181682576 181682786 + 10.1 0.000 intron (NM_001205293, intron 7 of 47) MSTA|LTR|ERVL-MaLR 199164 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr2-7002 chr2 142562932 142563142 + 10.1 0.000 Intergenic LTR2752|LTR|ERV1 -314627 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr10-6015 chr10 125492444 125492654 + 10.1 0.000 Intergenic Intergenic -81822 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr13-1069 chr13 35292432 35292642 + 10.1 0.000 intron (NM_015678, intron 35 of 57) intron (NM_015678, intron 35 of 57) 184152 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr18-2190 chr18 60371143 60371353 + 10.1 0.000 3' UTR (NM_005912, exon 1 of 1) 3' UTR (NM_005912, exon 1 of 1) 1527 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr9-3299 chr9 77820432 77820642 + 10.1 0.000 intron (NM_002072, intron 2 of 6) Tigger12c|DNA|TcMar-Tigger -172215 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr14-3339 chr14 89378033 89378243 + 10.1 0.000 intron (NM_001085471, intron 2 of 6) intron (NM_001085471, intron 2 of 6) 39095 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr17-5075 chr17 4006625 4006835 + 10.1 0.000 3' UTR (NM_015113, exon 55 of 55) 3' UTR (NM_015113, exon 55 of 55) 29627 NR_146884 105371496 Hs.579239 NR_146884 LINC01975 - long intergenic non-protein coding RNA 1975 ncRNA chr3-4055 chr3 77190359 77190569 + 10.1 0.000 intron (NM_001290039, intron 2 of 26) intron (NM_001290039, intron 2 of 26) 92452 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr3-6932 chr3 159173177 159173387 + 10.1 0.000 intron (NM_001197113, intron 1 of 10) intron (NM_001197113, intron 1 of 10) -99965 NM_001197107 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr8-4136 chr8 74389118 74389328 + 10.1 0.000 intron (NM_001362931, intron 5 of 5) L1PA7|LINE|L1 38820 NM_001362931 54332 Hs.168950 NM_018972 ENSG00000104381 GDAP1 CMT4|CMT4A|CMTRIA ganglioside induced differentiation associated protein 1 protein-coding chr10-5204 chr10 61164417 61164627 + 10.1 0.000 Intergenic Intergenic 148247 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr2-7204 chr2 216713749 216713959 + 10.1 0.000 Intergenic Intergenic -18305 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr15-4455 chr15 47435068 47435278 + 10.1 0.000 intron (NM_001198999, intron 2 of 19) intron (NM_001198999, intron 2 of 19) 251084 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr22-2178 chr22 45153475 45153685 + 10.1 0.000 promoter-TSS (NR_038957) promoter-TSS (NR_038957) -996 NR_038957 100506714 Hs.189902 NR_038956 NUP50-DT NUP50-AS1 NUP50 divergent transcript ncRNA chr15-3945 chr15 41303783 41303993 + 10.1 0.000 non-coding (NR_026757, exon 4 of 4) non-coding (NR_026757, exon 4 of 4) 18546 NR_152820 729082 Hs.380164 NR_026757 ENSG00000247556 OIP5-AS1 cyrano|linc-OIP5 OIP5 antisense RNA 1 ncRNA chr2-7637 chr2 27451324 27451534 + 10.1 0.000 intron (NM_015662, intron 35 of 47) intron (NM_015662, intron 35 of 47) 9048 NM_173853 200634 Hs.59509 NM_173853 ENSG00000157992 KRTCAP3 KCP3 keratinocyte associated protein 3 protein-coding chr3-6357 chr3 85595045 85595255 + 10.1 0.000 intron (NM_001256503, intron 2 of 9) intron (NM_001256503, intron 2 of 9) 90091 NM_001256505 253559 Hs.164578 NM_153184 ENSG00000175161 CADM2 IGSF4D|NECL3|Necl-3|SynCAM 2|synCAM2 cell adhesion molecule 2 protein-coding chr4-2503 chr4 22625160 22625370 + 10.1 0.000 Intergenic MIRc|SINE|MIR -67649 NM_020973 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr1-12344 chr1 1855940 1856150 + 10.1 0.000 intron (NM_001282538, intron 1 of 9) AluJr|SINE|Alu 35042 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr16-3757 chr16 24568474 24568684 + 10.1 0.000 intron (NM_006910, intron 16 of 17) intron (NM_006910, intron 16 of 17) 28992 NM_032626 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding chr8-7072 chr8 117079313 117079523 + 10.1 0.000 intron (NM_001172815, intron 2 of 10) MLT1L|LTR|ERVL-MaLR -55577 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr9-1493 chr9 130172099 130172309 + 10.1 0.000 promoter-TSS (NM_014286) promoter-TSS (NM_014286) -200 NM_014286 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr16-2287 chr16 4819431 4819641 + 10.1 0.000 intron (NM_001324098, intron 8 of 14) AluJr|SINE|Alu -16586 NR_046480 79641 Hs.459795 NM_024589 ENSG00000067836 ROGDI KTZS rogdi atypical leucine zipper protein-coding chr18-2749 chr18 80103359 80103569 + 10.1 0.000 Intergenic MER89-int|LTR|ERV1 -5798 NM_014913 22850 Hs.131915 NM_014913 ENSG00000101544 ADNP2 ZNF508 ADNP homeobox 2 protein-coding chr2-5865 chr2 239360846 239361056 + 10.1 0.000 intron (NM_006037, intron 1 of 26) intron (NM_006037, intron 1 of 26) -9147 NR_039948 100616360 NR_039948 ENSG00000264292 MIR2467 mir-2467 microRNA 2467 ncRNA chr1-8499 chr1 150672518 150672728 + 10.1 0.000 intron (NM_018178, intron 2 of 4) AluSx1|SINE|Alu 24531 NM_018178 55204 Hs.203699 NM_018178 ENSG00000143457 GOLPH3L GPP34R golgi phosphoprotein 3 like protein-coding chrX-2957 chrX 155514447 155514657 + 10.1 0.000 intron (NM_018196, intron 3 of 7) intron (NM_018196, intron 3 of 7) 48012 NR_039991 100507404 Hs.638368 NR_039991 ENSG00000224533 TMLHE-AS1 - TMLHE antisense RNA 1 ncRNA chr11-7205 chr11 133797885 133798095 + 10.1 0.000 intron (NR_120444, intron 2 of 2) intron (NR_120444, intron 2 of 2) 12386 NR_120444 646522 Hs.560000 NR_120444 ENSG00000255258 LINC02743 - long intergenic non-protein coding RNA 2743 ncRNA chr11-6907 chr11 107168317 107168527 + 10.1 0.000 Intergenic AluJb|SINE|Alu -149946 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr2-6278 chr2 48732551 48732761 + 10.1 0.000 intron (NM_000233, intron 1 of 10) MIR|SINE|MIR 23068 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr3-2015 chr3 45761128 45761338 + 10.1 0.000 intron (NM_022405, intron 8 of 9) intron (NM_022405, intron 8 of 9) 35303 NM_020208 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr11-3053 chr11 8462673 8462883 + 10.1 0.000 intron (NM_001352388, intron 6 of 14) intron (NM_001352388, intron 6 of 14) 131198 NM_001289061 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr12-4914 chr12 67335376 67335586 + 10.1 0.000 Intergenic AluSz|SINE|Alu 66123 NM_001329675 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr16-1852 chr16 70148363 70148573 + 10.1 0.000 exon (NM_017990, exon 17 of 19) exon (NM_017990, exon 17 of 19) 24980 NR_126007 400541 Hs.461183 NR_126007 ENSG00000247228 LOC400541 - uncharacterized LOC400541 ncRNA chr3-7054 chr3 174833233 174833443 + 10.1 0.000 Intergenic L1M5|LINE|L1 -25996 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr4-2721 chr4 4488432 4488642 + 10.1 0.000 intron (NM_001346282, intron 1 of 10) intron (NM_001346282, intron 1 of 10) -6837 NR_126434 104472519 Hs.691848 NR_126434 ENSG00000248221 STX18-IT1 - STX18 intronic transcript 1 ncRNA chr19-3263 chr19 2342760 2342970 + 10.1 0.000 intron (NM_001077238, intron 8 of 14) intron (NM_001077238, intron 8 of 14) 14181 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr1-6398 chr1 10818723 10818933 + 10.1 0.000 Intergenic Intergenic -22182 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chrX-1253 chrX 100746423 100746633 + 10.1 0.000 Intergenic Intergenic -14407 NM_001370162 94121 Hs.592224 NM_080737 ENSG00000102362 SYTL4 SLP4 synaptotagmin like 4 protein-coding chr4-6317 chr4 87860235 87860445 + 10.1 0.000 Intergenic Intergenic 25637 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr15-2961 chr15 49806891 49807101 + 10.1 0.000 Intergenic Intergenic 185948 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr14-2157 chr14 89388990 89389200 + 10.1 0.000 intron (NM_001085471, intron 2 of 6) intron (NM_001085471, intron 2 of 6) 28138 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr1-6504 chr1 24587256 24587466 + 10.1 0.000 intron (NM_001010980, intron 1 of 3) intron (NM_001010980, intron 1 of 3) 31274 NM_001010980 400746 Hs.200253 NM_001010980 ENSG00000184454 NCMAP C1orf130|MP11 non-compact myelin associated protein protein-coding chr3-3016 chr3 108474727 108474937 + 10.1 0.000 intron (NM_014981, intron 13 of 41) intron (NM_014981, intron 13 of 41) 54490 NM_014981 22989 Hs.731060 NM_014981 ENSG00000144821 MYH15 - myosin heavy chain 15 protein-coding chr12-4971 chr12 76591650 76591860 + 10.1 0.000 Intergenic MLT1E1A-int|LTR|ERVL-MaLR -31984 NM_001319652 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr7-5214 chr7 13281145 13281355 + 10.1 0.000 Intergenic Intergenic 593617 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr10-2352 chr10 83954000 83954210 + 10.1 0.000 Intergenic MIRb|SINE|MIR -185404 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr17-5455 chr17 39770432 39770642 + 10.1 0.000 intron (NM_001257413, intron 3 of 3) intron (NM_001257413, intron 3 of 3) 7688 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr2-4034 chr2 108735095 108735305 + 10.1 0.000 intron (NM_006267, intron 4 of 28) L2|LINE|L2 15718 NM_006267 5903 Hs.199561 NM_006267 ENSG00000153201 RANBP2 ADANE|ANE1|IIAE3|NUP358|TRP1|TRP2 RAN binding protein 2 protein-coding chr17-2525 chr17 17028656 17028866 + 10.1 0.000 Intergenic Intergenic -13696 NM_001364716 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr4-3821 chr4 118802157 118802367 + 10.1 0.000 intron (NM_014822, intron 7 of 22) intron (NM_014822, intron 7 of 22) 33864 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr12-2991 chr12 120659908 120660118 + 10.1 0.000 intron (NM_001033677, intron 2 of 5) intron (NM_001033677, intron 2 of 5) 9736 NM_004276 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr20-934 chr20 15927905 15928115 + 10.1 0.000 intron (NR_130924, intron 1 of 1) L1MC4|LINE|L1 -4696 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr7-3885 chr7 109373795 109374005 + 10.1 0.000 Intergenic L1PB1|LINE|L1 -489313 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr17-3940 chr17 60941214 60941424 + 10.1 0.000 intron (NM_001330413, intron 13 of 25) intron (NM_001330413, intron 13 of 25) 263468 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr2-2081 chr2 218367825 218368035 + 10.1 0.000 promoter-TSS (NR_110573) promoter-TSS (NR_110573) -28 NR_110573 101928513 Hs.512386 NR_110573 ENSG00000225062 CATIP-AS1 - CATIP antisense RNA 1 ncRNA chr12-2220 chr12 51971201 51971411 + 10.1 0.000 intron (NM_020327, intron 1 of 8) intron (NM_020327, intron 1 of 8) 17926 NM_020327 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr14-2237 chr14 104957135 104957345 + 10.1 0.000 intron (NM_001350929, intron 3 of 6) intron (NM_001350929, intron 3 of 6) 13267 NM_001350929 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding chr10-8116 chr10 69656833 69657043 + 10.1 0.000 Intergenic Intergenic 26691 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr1-4792 chr1 18114611 18114821 + 10.1 0.000 intron (NM_032880, intron 1 of 9) MIRc|SINE|MIR 6918 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr8-3989 chr8 53384676 53384886 + 10.1 0.000 Intergenic MER61C|LTR|ERV1 -133084 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr10-4670 chr10 129002838 129003048 + 10.1 0.000 Intergenic Intergenic 90110 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr3-5227 chr3 89383048 89383258 + 10.1 0.000 intron (NM_182644, intron 5 of 6) intron (NM_182644, intron 5 of 6) 275532 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr5-2664 chr5 17185669 17185879 + 10.1 0.000 intron (NR_027253, intron 1 of 2) intron (NR_027253, intron 1 of 2) -29782 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr4-7809 chr4 98611924 98612134 + 10.1 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 46582 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr14-1957 chr14 33523065 33523275 + 10.1 0.000 intron (NM_001165893, intron 3 of 10) intron (NM_001165893, intron 3 of 10) -185767 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr5-4277 chr5 142636134 142636344 + 10.1 0.000 intron (NM_001144935, intron 1 of 3) intron (NM_001144935, intron 1 of 3) 8062 NM_001257210 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr4-5369 chr4 186829943 186830153 + 10.1 0.000 Intergenic L2|LINE|L2 -106192 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr13-4101 chr13 79051625 79051835 + 10.1 0.000 Intergenic L2b|LINE|L2 -211680 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr11-5045 chr11 97596727 97596937 + 10.1 0.000 Intergenic L1ME3|LINE|L1 1088407 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr14-4748 chr14 61837552 61837762 + 10.1 0.000 intron (NM_001367656, intron 1 of 7) intron (NM_001367656, intron 1 of 7) 24954 NM_001367659 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr11-5817 chr11 7264648 7264858 + 10.1 0.000 intron (NM_175733, intron 1 of 6) L2|LINE|L2 12849 NM_175733 143425 Hs.177193 NM_175733 ENSG00000170743 SYT9 - synaptotagmin 9 protein-coding chr11-4556 chr11 122765749 122765959 + 10.1 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) -72646 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr6-5334 chr6 145420782 145420992 + 10.1 0.000 Intergenic MSTD|LTR|ERVL-MaLR 265990 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr18-1542 chr18 21129961 21130171 + 10.1 0.000 Intergenic Intergenic -18253 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr6-2956 chr6 36436416 36436626 + 10.1 0.000 intron (NM_152990, intron 2 of 4) L2b|LINE|L2 -6246 NM_001286580 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr13-3806 chr13 46109434 46109644 + 10.1 0.000 Intergenic L1MCc|LINE|L1 -4463 NM_001278541 1361 Hs.512937 NM_001872 ENSG00000080618 CPB2 CPU|PCPB|TAFI carboxypeptidase B2 protein-coding chrX-1903 chrX 137287990 137288200 + 10.1 0.000 Intergenic Intergenic -256421 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr1-8835 chr1 3132319 3132529 + 10.1 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 4449 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr8-2695 chr8 94466293 94466503 + 10.1 0.000 intron (NM_012415, intron 2 of 14) intron (NM_012415, intron 2 of 14) 8717 NM_012415 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr1-9042 chr1 12320548 12320758 + 10.1 0.000 intron (NM_015378, intron 32 of 69) intron (NM_015378, intron 32 of 69) 90623 NM_015378 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr10-3973 chr10 118861405 118861615 + 10.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -106540 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr11-7711 chr11 70467765 70467975 + 10.1 0.000 TTS (NM_012309) TTS (NM_012309) 69341 NM_005231 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr2-5546 chr2 163538090 163538300 + 10.1 0.000 Intergenic THE1C|LTR|ERVL-MaLR 197813 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr9-5559 chr9 110695945 110696155 + 10.1 0.000 intron (NM_001166281, intron 4 of 11) AluSx|SINE|Alu 27259 NM_001166280 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr1-5398 chr1 9225419 9225629 + 10.1 0.000 Intergenic Intergenic -9250 NM_004285 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr2-13711 chr2 166872490 166872700 + 10.1 0.000 Intergenic Intergenic -15892 NM_152381 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chrX-1415 chrX 27142929 27143139 + 10.1 0.000 Intergenic MIRb|SINE|MIR 320307 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr2-11744 chr2 11075230 11075440 + 10.1 0.000 Intergenic Intergenic 56841 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr2-7826 chr2 46566890 46567100 + 10.1 0.000 intron (NM_012249, intron 2 of 4) MER20B|DNA|hAT-Charlie 13243 NR_104182 100506142 Hs.658541 NR_104182 ENSG00000250116 LOC100506142 - uncharacterized LOC100506142 ncRNA chr12-1888 chr12 57735849 57736059 + 10.1 0.000 intron (NM_014770, intron 1 of 17) intron (NM_014770, intron 1 of 17) 2292 NM_001122772 116986 Hs.302435 NM_014770 ENSG00000135439 AGAP2 CENTG1|GGAP2|PIKE ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 protein-coding chr17-3582 chr17 80590934 80591144 + 10.1 0.000 intron (NM_020761, intron 1 of 33) L1ME3B|LINE|L1 46201 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr6-1501 chr6 144287049 144287259 + 10.1 0.000 Intergenic Intergenic -4583 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr14-5096 chr14 87403219 87403429 + 10.1 0.000 Intergenic Tigger8|DNA|TcMar-Tigger 251970 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr3-6950 chr3 161804731 161804941 + 10.1 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 308028 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr20-994 chr20 57546479 57546689 + 10.1 0.000 Intergenic Intergenic -14526 NM_002591 5105 Hs.1872 NM_002591 ENSG00000124253 PCK1 PCKDC|PEPCK-C|PEPCK1|PEPCKC phosphoenolpyruvate carboxykinase 1 protein-coding chrX-1070 chrX 132995280 132995490 + 10.1 0.000 Intergenic Intergenic 32887 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding chr7-6153 chr7 125510983 125511193 + 10.1 0.000 Intergenic Intergenic -246797 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr10-5004 chr10 32620667 32620877 + 10.1 0.000 intron (NM_001321115, intron 19 of 43) intron (NM_001321115, intron 19 of 43) 174632 NR_109826 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding chr20-2068 chr20 12637525 12637735 + 10.1 0.000 Intergenic LTR16A1|LTR|ERVL 299333 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr18-1089 chr18 49048630 49048840 + 10.1 0.000 TTS (NR_148999) TTS (NR_148999) 1033 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr3-8345 chr3 75862186 75862396 + 10.1 0.000 Intergenic Intergenic -76742 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr19-4761 chr19 30101778 30101988 + 10.1 0.000 Intergenic MSTB|LTR|ERVL-MaLR 159644 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr10-5593 chr10 92843162 92843372 + 10.1 0.000 intron (NM_001319194, intron 2 of 22) intron (NM_001319194, intron 2 of 22) -5188 NM_001319200 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr22-1986 chr22 20974593 20974803 + 10.1 0.000 intron (NM_144704, intron 7 of 20) intron (NM_144704, intron 7 of 20) 7443 NM_001146288 150209 Hs.723246 NM_144704 ENSG00000183773 AIFM3 AIFL apoptosis inducing factor mitochondria associated 3 protein-coding chr1-11898 chr1 50459804 50460014 + 10.1 0.000 intron (NM_007051, intron 18 of 18) MIRb|SINE|MIR -36466 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr1-13106 chr1 189914500 189914710 + 10.1 0.000 Intergenic L1MEg2|LINE|L1 561405 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr3-6805 chr3 145454874 145455084 + 10.1 0.000 Intergenic Intergenic 614206 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr6-5158 chr6 125871468 125871678 + 10.1 0.000 intron (NM_181782, intron 3 of 15) intron (NM_181782, intron 3 of 15) -47682 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr1-4911 chr1 40769826 40770036 + 10.1 0.000 intron (NM_001142587, intron 9 of 9) intron (NM_001142587, intron 9 of 9) 12647 NR_029833 407031 NR_029833 ENSG00000207962 MIR30C1 MIRN30C1|mir-30c-1 microRNA 30c-1 ncRNA chr9-6010 chr9 135374285 135374495 + 10.1 0.000 Intergenic Intergenic 31141 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr1-3866 chr1 43933315 43933525 + 10.1 0.000 promoter-TSS (NM_057090) promoter-TSS (NM_057090) 100 NM_057090 9048 Hs.632404 NM_003976 ENSG00000117407 ARTN ART|ENOVIN|EVN|NBN artemin protein-coding chr13-2525 chr13 60311474 60311684 + 10.1 0.000 Intergenic LTR33|LTR|ERVL -43475 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr4-5153 chr4 154622541 154622751 + 10.1 0.000 Intergenic AluJo|SINE|Alu -9838 NM_000509 2266 Hs.727584 NM_000509 ENSG00000171557 FGG - fibrinogen gamma chain protein-coding chr3-7022 chr3 171738963 171739173 + 10.1 0.000 intron (NM_002662, intron 1 of 26) L2c|LINE|L2 71415 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr4-8305 chr4 143805675 143805885 + 10.1 0.000 Intergenic Intergenic 23568 NR_134680 105377458 Hs.738046 NR_134680 LOC105377458 - uncharacterized LOC105377458 ncRNA chr9-1123 chr9 101486937 101487147 + 10.1 0.000 promoter-TSS (NM_001303108) promoter-TSS (NM_001303108) 131 NM_001303107 84302 Hs.388742 NM_032342 ENSG00000165152 TMEM246 C9orf125 transmembrane protein 246 protein-coding chr1-10106 chr1 98964528 98964738 + 10.1 0.000 intron (NM_001037317, intron 1 of 5) intron (NM_001037317, intron 1 of 5) -39643 NR_033940 100129620 Hs.588631 NR_033940 ENSG00000232825 LOC100129620 - uncharacterized LOC100129620 ncRNA chrX-1629 chrX 119055928 119056138 + 10.1 0.000 Intergenic LTR43B|LTR|ERV1 79701 NM_001289109 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr7-6399 chr7 153620547 153620757 + 10.1 0.000 Intergenic Intergenic -127481 NM_001364499 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr1-10393 chr1 156528771 156528981 + 10.1 0.000 intron (NM_178229, intron 35 of 37) intron (NM_178229, intron 35 of 37) -28101 NM_005920 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr6-5369 chr6 150726567 150726777 + 10.1 0.000 intron (NM_001329803, intron 1 of 13) intron (NM_001329803, intron 1 of 13) 5573 NM_001329801 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr6-4804 chr6 79179302 79179512 + 10.1 0.000 Intergenic MSTD|LTR|ERVL-MaLR -54267 NR_040671 100288198 Hs.586270 NR_040671 ENSG00000270362 HMGN3-AS1 - HMGN3 antisense RNA 1 ncRNA chr1-6382 chr1 9561638 9561848 + 10.1 0.000 intron (NM_032315, intron 2 of 6) intron (NM_032315, intron 2 of 6) 22278 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr1-6726 chr1 63663302 63663512 + 10.1 0.000 Intergenic L2b|LINE|L2 40191 NM_001172818 5236 Hs.1869 NM_002633 ENSG00000079739 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding chr12-2816 chr12 116434389 116434599 + 10.1 0.000 Intergenic Intergenic -6176 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr8-1190 chr8 52410306 52410516 + 10.1 0.000 promoter-TSS (NM_001352827) promoter-TSS (NM_001352827) -532 NM_001352838 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr4-2666 chr4 899265 899475 + 10.1 0.000 intron (NM_005255, intron 5 of 27) intron (NM_005255, intron 5 of 27) 32946 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chrX-1832 chrX 103536199 103536409 + 10.1 0.000 intron (NR_131237, intron 4 of 5) intron (NR_131237, intron 4 of 5) -16815 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chr1-7345 chr1 10810596 10810806 + 10.1 0.000 Intergenic MIRb|SINE|MIR -14055 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr6-4968 chr6 106287311 106287521 + 10.1 0.000 intron (NR_104402, intron 3 of 5) intron (NR_104402, intron 3 of 5) 28850 NR_104403 9474 Hs.486063 NM_004849 ENSG00000057663 ATG5 APG5|APG5-LIKE|APG5L|ASP|SCAR25|hAPG5 autophagy related 5 protein-coding chr4-6158 chr4 36246814 36247024 + 10.1 0.000 intron (NR_122079, intron 2 of 4) MIRb|SINE|MIR -2405 NM_015230 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr4-7173 chr4 39993221 39993431 + 10.1 0.000 Intergenic AluSz|SINE|Alu -15370 NM_001100400 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr15-2845 chr15 40838990 40839200 + 10.1 0.000 intron (NR_146467, intron 1 of 1) intron (NR_146467, intron 1 of 1) -4953 NM_003710 6692 Hs.233950 NM_003710 ENSG00000166145 SPINT1 HAI|HAI1|MANSC2 serine peptidase inhibitor, Kunitz type 1 protein-coding chr19-1688 chr19 9875356 9875566 + 10.1 0.000 intron (NM_058164, intron 1 of 5) intron (NM_058164, intron 1 of 5) -17286 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr6-3219 chr6 138428965 138429175 + 10.1 0.000 intron (NM_020464, intron 6 of 6) intron (NM_020464, intron 6 of 6) 6224 NR_036099 100423001 NR_036099 ENSG00000266555 MIR3145 mir-3145 microRNA 3145 ncRNA chrX-1466 chrX 110509764 110509974 + 10.1 0.000 Intergenic Intergenic -10443 NR_002718 6998 Hs.592361 NR_002718 ENSG00000225366 TDGF1P3 CR-3|CRIPTO|CRIPTO-3|CRIPTO3|TDGF1|TDGF2|TDGF3 teratocarcinoma-derived growth factor 1 pseudogene 3 pseudo chr6-4125 chr6 158686002 158686212 + 10.1 0.000 intron (NM_001242394, intron 6 of 17) intron (NM_001242394, intron 6 of 17) 22704 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr1-15246 chr1 112439335 112439545 + 10.1 0.000 intron (NM_018704, intron 3 of 5) intron (NM_018704, intron 3 of 5) 22393 NR_036210 100422976 NR_036210 ENSG00000283296 MIR4256 - microRNA 4256 ncRNA chr6-3679 chr6 152734204 152734414 + 10.1 0.000 Intergenic Intergenic -16488 NM_003381 7432 Hs.53973 NM_003381 ENSG00000146469 VIP PHM27 vasoactive intestinal peptide protein-coding chr2-13886 chr2 180022493 180022703 + 10.1 0.000 Intergenic Intergenic -15301 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr2-5297 chr2 69742818 69743028 + 10.1 0.000 intron (NM_001320700, intron 1 of 12) intron (NM_001320700, intron 1 of 12) 789 NM_001365496 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr6-3721 chr6 2220361 2220571 + 10.1 0.000 intron (NM_001500, intron 1 of 10) Tigger4|DNA|TcMar-Tigger 25139 NM_001500 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr9-4616 chr9 108606335 108606545 + 10.1 0.000 Intergenic MamRep605|LTR?|LTR? 249546 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr9-3324 chr9 93132447 93132657 + 10.1 0.000 intron (NM_004148, intron 1 of 3) L2a|LINE|L2 1699 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr13-714 chr13 51625848 51626058 + 10.1 0.000 intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 41491 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr12-3982 chr12 18224697 18224907 + 10.1 0.000 Intergenic Intergenic -36738 NM_001288774 5288 Hs.22500 NM_004570 ENSG00000139144 PIK3C2G PI3K-C2-gamma|PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma protein-coding chr10-3103 chr10 26557145 26557355 + 10.1 0.000 intron (NM_019043, intron 11 of 14) intron (NM_019043, intron 11 of 14) 22057 NR_134472 101929117 Hs.127031 NR_134472 LOC101929117 - uncharacterized LOC101929117 ncRNA chr11-3310 chr11 102950930 102951140 + 10.1 0.000 intron (NM_002427, intron 5 of 9) intron (NM_002427, intron 5 of 9) 4697 NM_002427 4322 Hs.2936 NM_002427 ENSG00000137745 MMP13 CLG3|MANDP1|MDST|MMP-13 matrix metallopeptidase 13 protein-coding chr6-5337 chr6 145963418 145963628 + 10.1 0.000 intron (NM_001370328, intron 1 of 31) intron (NM_001370328, intron 1 of 31) 574 NM_173082 257218 Hs.723297 NM_173082 ENSG00000146414 SHPRH bA545I5.2 SNF2 histone linker PHD RING helicase protein-coding chr12-4641 chr12 44511088 44511298 + 10.1 0.000 intron (NM_006159, intron 20 of 20) intron (NM_006159, intron 20 of 20) 364468 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr17-5402 chr17 33648136 33648346 + 10.1 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -114481 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr2-8141 chr2 82303932 82304142 + 10.1 0.000 Intergenic Intergenic -552766 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr12-3576 chr12 32542007 32542217 + 10.1 0.000 intron (NM_001304480, intron 1 of 16) intron (NM_001304480, intron 1 of 16) 7819 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr17-7707 chr17 32383949 32384159 + 10.1 0.000 Intergenic Intergenic 33916 NM_001098507 7756 Hs.500775 NM_003457 ENSG00000010244 ZNF207 BuGZ|hBuGZ zinc finger protein 207 protein-coding chr19-4922 chr19 43306295 43306505 + 10.1 0.000 Intergenic Intergenic -36870 NM_001301708 5678 Hs.502092 NM_002784 ENSG00000183668 PSG9 PS34|PSBG-11|PSBG-9|PSG11|PSGII pregnancy specific beta-1-glycoprotein 9 protein-coding chr20-2785 chr20 54683553 54683763 + 10.1 0.000 Intergenic L2a|LINE|L2 208065 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr7-5190 chr7 10142681 10142891 + 10.1 0.000 Intergenic Intergenic 508516 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr5-4566 chr5 22745947 22746157 + 10.1 0.000 intron (NM_004061, intron 1 of 14) intron (NM_004061, intron 1 of 14) 107292 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr20-2981 chr20 37511721 37511931 + 10.1 0.000 Intergenic Intergenic 8477 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr2-3009 chr2 47620980 47621190 + 10.1 0.000 Intergenic Intergenic -50754 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr4-3098 chr4 153514163 153514373 + 10.1 0.000 intron (NM_001131007, intron 3 of 34) intron (NM_001131007, intron 3 of 34) 47908 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr2-3088 chr2 116094937 116095147 + 10.1 0.000 Intergenic L1MA4A|LINE|L1 751227 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr1-1669 chr1 39633041 39633251 + 10.1 0.000 intron (NM_014571, intron 1 of 4) intron (NM_014571, intron 1 of 4) 6497 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr6-755 chr6 108074564 108074774 + 10.1 0.000 promoter-TSS (NM_014028) promoter-TSS (NM_014028) 72 NM_014028 28962 Hs.226780 NM_014028 ENSG00000081087 OSTM1 GIPN|GL|HSPC019|OPTB5 osteoclastogenesis associated transmembrane protein 1 protein-coding chr2-3952 chr2 64917801 64918011 + 10.1 0.000 intron (NR_036586, intron 1 of 2) intron (NR_036586, intron 1 of 2) 14541 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr22-2806 chr22 42846689 42846899 + 10.1 0.000 intron (NM_001142293, intron 2 of 14) intron (NM_001142293, intron 2 of 14) 10479 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr2-4738 chr2 2703533 2703743 + 10.1 0.000 Intergenic Intergenic -372363 NM_001329851 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr12-4423 chr12 8490309 8490519 + 10.1 0.000 Intergenic L1MB1|LINE|L1 -23089 NM_080387 338339 Hs.351811 NM_080387 ENSG00000166527 CLEC4D CD368|CLEC-6|CLEC6|CLECSF8|Dectin-3|MCL|MPCL C-type lectin domain family 4 member D protein-coding chr10-5723 chr10 101121572 101121782 + 10.1 0.000 intron (NR_130724, intron 2 of 2) intron (NR_130724, intron 2 of 2) 9469 NR_130723 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr12-4734 chr12 51702919 51703129 + 10.1 0.000 intron (NM_001369788, intron 9 of 25) intron (NM_001369788, intron 9 of 25) 111788 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr11-6480 chr11 67871340 67871550 + 10.1 0.000 Intergenic L1PA4|LINE|L1 -66109 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr10-6895 chr10 36671785 36671995 + 10.1 0.000 Intergenic Intergenic -453967 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr2-9170 chr2 213289283 213289493 + 10.1 0.000 intron (NR_047659, intron 2 of 17) intron (NR_047659, intron 2 of 17) 4924 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr12-5217 chr12 106643302 106643512 + 10.1 0.000 intron (NM_001206691, intron 3 of 17) intron (NM_001206691, intron 3 of 17) 41293 NR_038912 100505978 Hs.662583 NR_038912 ENSG00000257711 LOC100505978 - uncharacterized LOC100505978 ncRNA chr16-4833 chr16 87620898 87621108 + 10.1 0.000 intron (NM_020655, intron 1 of 4) AluSx1|SINE|Alu 18495 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr2-3250 chr2 238247626 238247836 + 10.1 0.000 intron (NM_022817, intron 22 of 22) L2a|LINE|L2 -7693 NM_001282434 55502 Hs.42949 NM_018645 ENSG00000144485 HES6 C-HAIRY1|HES-6|bHLHb41|bHLHc23 hes family bHLH transcription factor 6 protein-coding chr11-8610 chr11 2103351 2103561 + 10.1 0.000 Intergenic Intergenic 30753 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr12-5009 chr12 81545739 81545949 + 10.1 0.000 intron (NM_001220474, intron 2 of 30) AluSx|SINE|Alu -33453 NM_001282536 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr15-2437 chr15 74633992 74634202 + 10.1 0.000 intron (NM_001142443, intron 9 of 9) L2a|LINE|L2 19103 NM_001130028 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr1-7246 chr1 227235142 227235352 + 10.1 0.000 intron (NM_001366019, intron 2 of 36) intron (NM_001366019, intron 2 of 36) 83245 NM_001366010 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr20-2199 chr20 53706922 53707132 + 10.1 0.000 Intergenic MER63A|DNA|hAT-Blackjack 98673 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr18-1599 chr18 41253021 41253231 + 10.1 0.000 Intergenic Intergenic 267551 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr16-1708 chr16 19608223 19608433 + 10.1 0.000 intron (NM_001300743, intron 10 of 27) intron (NM_001300743, intron 10 of 27) 52625 NM_001365295 57020 Hs.654964 NM_020314 ENSG00000103544 VPS35L C16orf62 VPS35 endosomal protein sorting factor like protein-coding chr3-3471 chr3 181869516 181869726 + 10.1 0.000 Intergenic L1MC4|LINE|L1 -82743 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr9-7461 chr9 27439188 27439398 + 10.1 0.000 intron (NM_024761, intron 2 of 3) intron (NM_024761, intron 2 of 3) -85021 NM_020124 56832 Hs.591083 NM_020124 ENSG00000147896 IFNK IFNT1|INFE1 interferon kappa protein-coding chr19-3442 chr19 19447541 19447751 + 10.1 0.000 intron (NM_001300946, intron 2 of 12) intron (NM_001300946, intron 2 of 12) 12583 NR_030370 693225 NR_030370 ENSG00000207821 MIR640 MIRN640|hsa-mir-640 microRNA 640 ncRNA chr6-7535 chr6 69064462 69064672 + 10.1 0.000 intron (NM_001704, intron 16 of 31) intron (NM_001704, intron 16 of 31) 429285 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr1-11024 chr1 221612591 221612801 + 10.1 0.000 Intergenic Intergenic 124204 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr1-7123 chr1 202241530 202241740 + 10.1 0.000 intron (NM_001017404, intron 4 of 15) intron (NM_001017404, intron 4 of 15) 27480 NM_001017404 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr16-4518 chr16 60363812 60364022 + 10.1 0.000 Intergenic Intergenic -4124 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr6-5608 chr6 43437047 43437257 + 10.1 0.000 intron (NM_033450, intron 4 of 19) MLT1O|LTR|ERVL-MaLR 2610 NR_106894 102466746 NR_106894 ENSG00000276770 MIR6780B hsa-mir-6780b microRNA 6780b ncRNA chr2-11361 chr2 207828901 207829111 + 10.1 0.000 intron (NM_001080475, intron 7 of 7) intron (NM_001080475, intron 7 of 7) -59100 NM_003468 7855 Hs.17631 NM_003468 ENSG00000163251 FZD5 C2orf31|HFZ5 frizzled class receptor 5 protein-coding chr4-2326 chr4 141623207 141623417 + 10.1 0.000 Intergenic MER4-int|LTR|ERV1 -13271 NM_000585 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr5-5683 chr5 160688051 160688261 + 10.1 0.000 intron (NM_001366654, intron 2 of 9) intron (NM_001366654, intron 2 of 9) -2765 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr6-5788 chr6 5190717 5190927 + 10.1 0.000 intron (NM_001164840, intron 2 of 2) intron (NM_001164840, intron 2 of 2) -42500 NR_037462 100500900 NR_037462 ENSG00000265083 MIR3691 mir-3691 microRNA 3691 ncRNA chr6-4390 chr6 24711178 24711388 + 10.1 0.000 intron (NM_030939, intron 3 of 4) intron (NM_030939, intron 3 of 4) 7871 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding chr20-1718 chr20 39961089 39961299 + 10.1 0.000 Intergenic Intergenic -43267 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr14-2747 chr14 101580879 101581089 + 10.1 0.000 Intergenic L1PA13|LINE|L1 19633 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr16-2497 chr16 88959503 88959713 + 10.1 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 17599 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr7-5435 chr7 37259719 37259929 + 10.1 0.000 intron (NM_001206480, intron 5 of 21) intron (NM_001206480, intron 5 of 21) 93844 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr9-6070 chr9 137039284 137039494 + 10.1 0.000 TTS (NM_015392) TTS (NM_015392) -6549 NM_004479 2529 Hs.457 NM_004479 ENSG00000180549 FUT7 FucT-VII fucosyltransferase 7 protein-coding chr8-2790 chr8 121191433 121191643 + 10.1 0.000 Intergenic Intergenic -379492 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr17-1771 chr17 32943780 32943990 + 10.1 0.000 3' UTR (NM_015544, exon 8 of 8) 3' UTR (NM_015544, exon 8 of 8) 15732 NM_015544 26022 Hs.3447 NM_015544 ENSG00000006042 TMEM98 TADA1 transmembrane protein 98 protein-coding chr10-5009 chr10 32888674 32888884 + 10.1 0.000 Intergenic L1ME1|LINE|L1 12693 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr7-4434 chr7 115359423 115359633 + 10.1 0.000 Intergenic Intergenic -128173 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr5-6264 chr5 97878925 97879135 + 10.1 0.000 intron (NR_146299, intron 1 of 2) LTR88a|LTR|Gypsy? 38272 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA chr7-3641 chr7 43276676 43276886 + 10.1 0.000 intron (NM_001287059, intron 2 of 27) intron (NM_001287059, intron 2 of 27) 125886 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr15-3303 chr15 78317254 78317464 + 10.1 0.000 Intergenic Intergenic -17750 NM_001303247 80349 Hs.513055 NM_025234 ENSG00000140395 WDR61 REC14|SKI8 WD repeat domain 61 protein-coding chr1-11829 chr1 31781842 31782052 + 10.1 0.000 Intergenic Intergenic -17607 NM_001294335 576 Hs.524138 NM_001294335 ENSG00000121753 ADGRB2 BAI2 adhesion G protein-coupled receptor B2 protein-coding chr15-2191 chr15 88752445 88752655 + 10.1 0.000 Intergenic Intergenic -50886 NM_001369268 176 Hs.2159 NM_001135 ENSG00000157766 ACAN AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD aggrecan protein-coding chrX-1117 chrX 20159892 20160102 + 10.1 0.000 intron (NM_004586, intron 20 of 21) L2c|LINE|L2 -18159 NM_001412 1964 Hs.522590 NM_001412 ENSG00000173674 EIF1AX EIF1A|EIF1AP1|EIF4C|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A X-linked protein-coding chr10-2448 chr10 13439907 13440117 + 10.1 0.000 intron (NM_152751, intron 8 of 8) intron (NM_152751, intron 8 of 8) 62964 NM_152751 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr18-1683 chr18 76671260 76671470 + 10.1 0.000 Intergenic Intergenic -18664 NR_122073 400661 Hs.514963 NR_122073 ENSG00000276397 LINC01879 - long intergenic non-protein coding RNA 1879 ncRNA chr8-5384 chr8 23625308 23625518 + 10.1 0.000 Intergenic Intergenic 57476 NM_001256339 4824 Hs.55999 NM_006167 ENSG00000167034 NKX3-1 BAPX2|NKX3|NKX3.1|NKX3A NK3 homeobox 1 protein-coding chr17-4603 chr17 4510284 4510494 + 10.1 0.000 intron (NM_001124758, intron 1 of 12) intron (NM_001124758, intron 1 of 12) 11508 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr18-1385 chr18 51031104 51031314 + 10.1 0.000 intron (NM_005359, intron 1 of 11) intron (NM_005359, intron 1 of 11) 996 NM_005359 4089 Hs.75862 NM_005359 ENSG00000141646 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding chr10-6493 chr10 51257819 51258029 + 10.1 0.000 intron (NM_001098512, intron 2 of 17) MLT1K|LTR|ERVL-MaLR -41649 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr12-4403 chr12 6500851 6501061 + 10.1 0.000 intron (NM_014865, intron 2 of 31) L2a|LINE|L2 6854 NM_014865 9918 Hs.5719 NM_014865 ENSG00000010292 NCAPD2 CAP-D2|CNAP1|MCPH21|hCAP-D2 non-SMC condensin I complex subunit D2 protein-coding chr5-7437 chr5 31060024 31060234 + 10.1 0.000 Intergenic Intergenic -133557 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr16-2296 chr16 11498000 11498210 + 10.1 0.000 intron (NM_001370704, intron 10 of 66) intron (NM_001370704, intron 10 of 66) 29142 NM_001370704 400499 Hs.459937 NM_001370704 ENSG00000188897 LOC400499 - putative uncharacterized protein LOC400499 protein-coding chr22-2878 chr22 45725840 45726050 + 10.1 0.000 intron (NM_013236, intron 6 of 11) L1PB3|LINE|L1 -34579 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr13-1710 chr13 93248743 93248953 + 10.1 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 22041 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr20-1464 chr20 64089599 64089809 + 10.1 0.000 intron (NM_001200019, intron 2 of 5) intron (NM_001200019, intron 2 of 5) -2984 NM_001318855 4987 Hs.2859 NM_000913 ENSG00000125510 OPRL1 KOR-3|NOCIR|NOP|NOPr|OOR|ORL1 opioid related nociceptin receptor 1 protein-coding chr10-4204 chr10 110040054 110040264 + 10.1 0.000 intron (NM_001121, intron 1 of 13) intron (NM_001121, intron 1 of 13) -31778 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr2-8408 chr2 116292922 116293132 + 10.1 0.000 Intergenic L1MB1|LINE|L1 949212 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chrX-2627 chrX 109624749 109624959 + 10.1 0.000 exon (NM_012282, exon 1 of 1) exon (NM_012282, exon 1 of 1) 318 NM_012282 23630 Hs.522753 NM_012282 ENSG00000176076 KCNE5 KCNE1L potassium voltage-gated channel subfamily E regulatory subunit 5 protein-coding chr15-2839 chr15 40467126 40467336 + 10.1 0.000 non-coding (NR_125372, exon 5 of 5) non-coding (NR_125372, exon 5 of 5) -3730 NM_130468 113189 Hs.442449 NM_130468 ENSG00000169105 CHST14 ATCS|D4ST1|EDSMC1|HNK1ST carbohydrate sulfotransferase 14 protein-coding chr8-4273 chr8 94435435 94435645 + 10.1 0.000 intron (NM_001205262, intron 3 of 3) intron (NM_001205262, intron 3 of 3) 1404 NM_001256141 100861412 Hs.30561 NM_001256141 ENSG00000265817 FSBP - fibrinogen silencer binding protein protein-coding chr2-8583 chr2 137671638 137671848 + 10.1 0.000 intron (NM_001316349, intron 27 of 27) THE1D|LTR|ERVL-MaLR 256189 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr4-3887 chr4 142824514 142824724 + 10.1 0.000 intron (NM_001331040, intron 1 of 25) intron (NM_001331040, intron 1 of 25) 21916 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr7-1816 chr7 102433235 102433445 + 10.1 0.000 promoter-TSS (NM_001271818) promoter-TSS (NM_001271818) -190 NM_001271818 80228 Hs.363308 NM_032831 ENSG00000160991 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding chr20-1675 chr20 34069946 34070156 + 10.1 0.000 intron (NM_007367, intron 2 of 8) intron (NM_007367, intron 2 of 8) 20932 NR_039911 100616434 NR_039911 ENSG00000264616 MIR4755 mir-4755 microRNA 4755 ncRNA chr10-3162 chr10 76243236 76243446 + 10.1 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 460580 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr5-3375 chr5 139359441 139359651 + 10.1 0.000 intron (NM_001033112, intron 1 of 3) intron (NM_001033112, intron 1 of 3) 17112 NM_001033112 51247 Hs.396644 NM_016480 ENSG00000120727 PAIP2 PAIP-2|PAIP2A poly(A) binding protein interacting protein 2 protein-coding chr21-287 chr21 41426375 41426585 + 10.1 0.000 intron (NM_001178046, intron 1 of 14) CpG 241 NM_002462 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding chr10-2733 chr10 113228583 113228793 + 10.1 0.000 Intergenic Intergenic 99417 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr4-5015 chr4 139198311 139198521 + 10.1 0.000 Intergenic LTR8|LTR|ERV1 -21198 NM_001371336 chr14-2679 chr14 76232163 76232373 + 10.1 0.000 Intergenic Intergenic 77914 NM_017972 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr2-4268 chr2 228917286 228917496 + 10.1 0.000 Intergenic ERVL-E-int|LTR|ERVL -305996 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr2-6528 chr2 202507202 202507412 + 10.1 0.000 intron (NM_001204, intron 3 of 12) intron (NM_001204, intron 3 of 12) -127662 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr8-1704 chr8 116443263 116443473 + 10.1 0.000 Intergenic Intergenic -118309 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr10-5680 chr10 99468227 99468437 + 10.1 0.000 Intergenic Intergenic -37708 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr7-9086 chr7 105499026 105499236 + 10.1 0.000 intron (NM_001318163, intron 4 of 15) L2|LINE|L2 9389 NM_001318163 54517 Hs.520619 NM_019042 ENSG00000091127 PUS7 IDDABS pseudouridine synthase 7 protein-coding chr1-7022 chr1 171185162 171185372 + 10.1 0.000 promoter-TSS (NM_001365900) promoter-TSS (NM_001365900) -33 NR_160266 2327 Hs.144912 NM_001460 ENSG00000094963 FMO2 FMO1B1 flavin containing dimethylaniline monoxygenase 2 protein-coding chr2-4537 chr2 43184659 43184869 + 10.1 0.000 Intergenic Cheshire|DNA|hAT-Charlie 41842 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein like 2 protein-coding chr4-2691 chr4 2280833 2281043 + 10.1 0.000 intron (NM_020972, intron 8 of 12) intron (NM_020972, intron 8 of 12) -18829 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr15-4075 chr15 70022923 70023133 + 10.1 0.000 Intergenic MER66B|LTR|ERV1 56440 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr12-1449 chr12 121133228 121133438 + 10.1 0.000 intron (NR_033953, intron 1 of 10) intron (NR_033953, intron 1 of 10) 457 NR_033948 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr12-2777 chr12 57129537 57129747 + 10.1 0.000 intron (NM_002332, intron 1 of 88) intron (NM_002332, intron 1 of 88) 1159 NM_002332 4035 Hs.162757 NM_002332 ENSG00000123384 LRP1 A2MR|APOER|APR|CD91|IGFBP-3R|IGFBP3R|IGFBP3R1|KPA|LRP|LRP1A|TGFBR5 LDL receptor related protein 1 protein-coding chr14-3279 chr14 81550417 81550627 + 10.1 0.000 Intergenic L1MC4|LINE|L1 -16661 NM_001244984 6400 Hs.181300 NM_005065 ENSG00000071537 SEL1L Hrd3|PRO1063|SEL1-LIKE|SEL1L1 SEL1L adaptor subunit of ERAD E3 ubiquitin ligase protein-coding chr20-2729 chr20 49383923 49384133 + 10.1 0.000 intron (NM_004975, intron 1 of 1) L2b|LINE|L2 98640 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr11-9775 chr11 69599489 69599699 + 10.1 0.000 Intergenic Intergenic -41511 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr4-4169 chr4 8608565 8608775 + 10.1 0.000 intron (NM_001014447, intron 7 of 10) intron (NM_001014447, intron 7 of 10) 15905 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr8-4433 chr8 110687524 110687734 + 10.1 0.000 Intergenic ERV24_Prim-int|LTR|ERV1 339804 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr18-541 chr18 12327150 12327360 + 10.1 0.000 TTS (NM_001303526) TTS (NM_001303526) 19014 NM_032525 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr6-1180 chr6 131063341 131063551 + 10.1 0.000 promoter-TSS (NM_001199388) promoter-TSS (NM_001199388) -124 NM_001350320 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr2-5647 chr2 193921292 193921502 + 10.1 0.000 Intergenic L1PA12|LINE|L1 -422872 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr18-1251 chr18 54441635 54441845 + 10.1 0.000 Intergenic Intergenic 83823 NR_110234 162681 Hs.208701 NM_173529 ENSG00000166845 C18orf54 LAS2 chromosome 18 open reading frame 54 protein-coding chr22-3162 chr22 28103911 28104121 + 10.1 0.000 intron (NM_001145418, intron 8 of 22) intron (NM_001145418, intron 8 of 22) -183404 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr16-2677 chr16 70804618 70804828 + 10.1 0.000 3' UTR (NM_001270974, exon 86 of 86) 3' UTR (NM_001270974, exon 86 of 86) -3565 NM_018052 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|TAX1BP2|TRX VAC14 component of PIKFYVE complex protein-coding chr2-3325 chr2 168396161 168396371 + 10.1 0.000 Intergenic Intergenic -60006 NM_203463 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr8-5027 chr8 19983320 19983530 + 10.1 0.000 Intergenic MIRb|SINE|MIR 44172 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr21-1281 chr21 34079782 34079992 + 10.1 0.000 intron (NM_032476, intron 1 of 2) intron (NM_032476, intron 1 of 2) 6309 NM_006933 6526 Hs.302742 NM_006933 ENSG00000198743 SLC5A3 BCW2|SMIT|SMIT1|SMIT2 solute carrier family 5 member 3 protein-coding chr11-5738 chr11 2464606 2464816 + 10.1 0.000 intron (NM_181798, intron 1 of 15) intron (NM_181798, intron 1 of 15) 3257 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr8-3907 chr8 40896316 40896526 + 10.1 0.000 intron (NM_024645, intron 1 of 6) intron (NM_024645, intron 1 of 6) 1405 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr5-1775 chr5 33558394 33558604 + 10.1 0.000 intron (NM_001324512, intron 18 of 21) intron (NM_001324512, intron 18 of 21) 117723 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr4-3960 chr4 182695674 182695884 + 10.1 0.000 intron (NM_001080477, intron 12 of 27) Arthur1|DNA|hAT-Tip100 221474 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr9-2369 chr9 119026199 119026409 + 10.1 0.000 Intergenic Intergenic 343131 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr9-5748 chr9 126842439 126842649 + 10.1 0.000 Intergenic Intergenic -18095 NM_001099270 403341 Hs.177633 NM_203482 ENSG00000177125 ZBTB34 ZNF918 zinc finger and BTB domain containing 34 protein-coding chr1-10943 chr1 211990516 211990726 + 10.1 0.000 intron (NM_015434, intron 7 of 19) intron (NM_015434, intron 7 of 19) -44932 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr20-1980 chr20 44370648 44370858 + 10.1 0.000 intron (NM_175914, intron 1 of 9) intron (NM_175914, intron 1 of 9) 14952 NM_175914 3172 Hs.116462 NM_000457 ENSG00000101076 HNF4A FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14 hepatocyte nuclear factor 4 alpha protein-coding chr3-3518 chr3 30231409 30231619 + 10.1 0.000 Intergenic Intergenic -287354 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr1-7159 chr1 206636805 206637015 + 10.1 0.000 5' UTR (NM_001004023, exon 2 of 4) 5' UTR (NM_001004023, exon 2 of 4) 1374 NM_001004023 8444 Hs.164267 NM_003582 ENSG00000143479 DYRK3 DYRK5|RED|REDK|hYAK3-2 dual specificity tyrosine phosphorylation regulated kinase 3 protein-coding chr21-530 chr21 39067231 39067441 + 10.1 0.000 Intergenic Intergenic -89562 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr3-9021 chr3 21149223 21149433 + 10.1 0.000 Intergenic MSTB2|LTR|ERVL-MaLR -256398 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr2-9120 chr2 207152133 207152343 + 10.1 0.000 intron (NM_001270943, intron 1 of 3) intron (NM_001270943, intron 1 of 3) 13710 NM_003709 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr3-5426 chr3 169932181 169932391 + 10.1 0.000 intron (NM_001304366, intron 7 of 8) intron (NM_001304366, intron 7 of 8) 20714 NM_001304366 344658 Hs.439922 NM_182610 ENSG00000187033 SAMD7 - sterile alpha motif domain containing 7 protein-coding chr4-4606 chr4 77184260 77184470 + 10.1 0.000 Intergenic Intergenic 27158 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr13-2521 chr13 60112753 60112963 + 10.1 0.000 intron (NM_001258366, intron 1 of 26) intron (NM_001258366, intron 1 of 26) -31840 NR_046540 100874196 Hs.662188 NR_046540 ENSG00000223815 DIAPH3-AS2 DIPAH3-AS2 DIAPH3 antisense RNA 2 ncRNA chr1-10507 chr1 166701252 166701462 + 10.1 0.000 Intergenic L2c|LINE|L2 97441 NR_002925 116123 Hs.348539 NM_138784 ENSG00000215834 FMO9P - flavin containing dimethylaniline monoxygenase 9, pseudogene pseudo chr4-4417 chr4 46958632 46958842 + 10.1 0.000 intron (NM_001204267, intron 7 of 7) intron (NM_001204267, intron 7 of 7) 34844 NM_000809 2557 Hs.248112 NM_000809 ENSG00000109158 GABRA4 - gamma-aminobutyric acid type A receptor alpha4 subunit protein-coding chr2-6650 chr2 6915512 6915722 + 10.1 0.000 intron (NR_033997, intron 3 of 4) intron (NR_033997, intron 3 of 4) -1795 NM_014746 9781 Hs.22146 NM_014746 ENSG00000151692 RNF144A RNF144|UBCE7IP4|hUIP4 ring finger protein 144A protein-coding chr19-4917 chr19 42526304 42526514 + 10.1 0.000 intron (NM_001184813, intron 2 of 7) intron (NM_001184813, intron 2 of 7) 2072 NM_001184813 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr4-5557 chr4 141128214 141128424 + 10.1 0.000 intron (NM_020724, intron 1 of 6) MIRb|SINE|MIR 5150 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr16-3171 chr16 81852134 81852344 + 10.1 0.000 intron (NM_002661, intron 2 of 32) MLT1K|LTR|ERVL-MaLR 72948 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr17-6701 chr17 79055946 79056156 + 10.1 0.000 Intergenic AluSx3|SINE|Alu -18886 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr1-10937 chr1 211643532 211643742 + 10.1 0.000 intron (NR_131925, intron 2 of 2) intron (NR_131925, intron 2 of 2) 3829 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr1-9983 chr1 82613198 82613408 + 10.1 0.000 Intergenic Intergenic -289880 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr10-8825 chr10 109531802 109532012 + 10.1 0.000 Intergenic L1PA7|LINE|L1 391339 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr9-5497 chr9 103828880 103829090 + 10.1 0.000 Intergenic AluJb|SINE|Alu -170724 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr11-6724 chr11 80461970 80462180 + 10.1 0.000 Intergenic L1PREC2|LINE|L1 300728 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr1-7841 chr1 75227615 75227825 + 10.1 0.000 intron (NM_001320283, intron 11 of 21) intron (NM_001320283, intron 11 of 21) 93332 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr9-7134 chr9 131883774 131883984 + 10.1 0.000 intron (NM_001253881, intron 5 of 6) L1ME1|LINE|L1 -143935 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr4-3426 chr4 77177394 77177604 + 10.1 0.000 Intergenic Intergenic 20292 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr2-4148 chr2 172962932 172963142 + 10.1 0.000 intron (NM_001282901, intron 2 of 24) MSTA|LTR|ERVL-MaLR 34832 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr4-8193 chr4 133821130 133821340 + 10.1 0.000 Intergenic L1P2|LINE|L1 380554 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr1-5719 chr1 71047776 71047986 + 10.1 0.000 promoter-TSS (NR_028292) promoter-TSS (NR_028292) -65 NM_198714 5733 Hs.445000 NM_000957 ENSG00000050628 PTGER3 EP3|EP3-I|EP3-II|EP3-III|EP3-IV|EP3-VI|EP3e|PGE2-R prostaglandin E receptor 3 protein-coding chr11-3532 chr11 10551176 10551386 + 10.1 0.000 intron (NR_034094, intron 1 of 2) MLT1F2|LTR|ERVL-MaLR 10045 NR_046374 100129827 Hs.246769 NR_034093 ENSG00000177112 MRVI1-AS1 - MRVI1 antisense RNA 1 ncRNA chr11-2870 chr11 26187864 26188074 + 10.1 0.000 Intergenic Intergenic -1154 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr4-6870 chr4 10695747 10695957 + 10.1 0.000 Intergenic Intergenic -11084 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr1-10644 chr1 181651750 181651960 + 10.1 0.000 intron (NM_001205293, intron 7 of 47) intron (NM_001205293, intron 7 of 47) 168338 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr4-2909 chr4 84287762 84287972 + 10.1 0.000 intron (NR_125909, intron 2 of 8) L1PA7|LINE|L1 11302 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr11-8409 chr11 99793869 99794079 + 10.1 0.000 intron (NM_175566, intron 1 of 21) L1PA15|LINE|L1 237829 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr20-1934 chr20 17620233 17620443 + 10.1 0.000 exon (NM_004587, exon 18 of 25) exon (NM_004587, exon 18 of 25) 50263 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr5-3306 chr5 123221818 123222028 + 10.1 0.000 Intergenic Intergenic -131607 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr6-3129 chr6 107076080 107076290 + 10.1 0.000 intron (NM_001080450, intron 4 of 4) intron (NM_001080450, intron 4 of 4) 38247 NM_001080450 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr3-6363 chr3 87082808 87083018 + 10.1 0.000 Intergenic Intergenic -6367 NR_104153 100846978 Hs.570649 NR_047469 ENSG00000281392 LINC00506 - long intergenic non-protein coding RNA 506 ncRNA chr12-4327 chr12 252977 253187 + 10.1 0.000 TTS (NR_120482) TTS (NR_120482) 4217 NR_120482 102723544 Hs.669733 NR_120482 ENSG00000255746 LOC102723544 - uncharacterized LOC102723544 ncRNA chr20-1605 chr20 8466818 8467028 + 10.1 0.000 intron (NM_182734, intron 3 of 32) intron (NM_182734, intron 3 of 32) 218219 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr13-1452 chr13 73722274 73722484 + 10.1 0.000 intron (NM_007249, intron 6 of 7) intron (NM_007249, intron 6 of 7) 158135 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr6-3405 chr6 81401952 81402162 + 10.1 0.000 Intergenic Intergenic 350624 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chrX-1748 chrX 46431730 46431940 + 10.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL -15354 NM_001129900 55634 Hs.632800 NM_017776 ENSG00000147121 KRBOX4 ZNF673 KRAB box domain containing 4 protein-coding chr17-5587 chr17 47502569 47502779 + 10.1 0.000 Intergenic Intergenic -10054 NR_033934 653479 Hs.537279 NR_033934 MRPL45P2 - mitochondrial ribosomal protein L45 pseudogene 2 pseudo chr6-3862 chr6 43930436 43930646 + 10.1 0.000 intron (NR_024478, intron 1 of 1) AluJr|SINE|Alu 39513 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr4-4548 chr4 72067781 72067991 + 10.1 0.000 intron (NM_053036, intron 1 of 3) MLT1A1-int|LTR|ERVL-MaLR 28754 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr7-3248 chr7 2452801 2453011 + 10.1 0.000 Intergenic AluJb|SINE|Alu 23477 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr9-2229 chr9 137674066 137674276 + 10.1 0.000 intron (NM_001354612, intron 1 of 8) intron (NM_001354612, intron 1 of 8) 55166 NM_001354611 79813 Hs.495511 NM_024757 ENSG00000181090 EHMT1 EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D euchromatic histone lysine methyltransferase 1 protein-coding chr2-11781 chr2 14546039 14546249 + 10.1 0.000 Intergenic Intergenic -86573 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr10-3323 chr10 5949427 5949637 + 10.1 0.000 Intergenic Intergenic 19396 NM_001351096 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr19-4507 chr19 6679302 6679512 + 10.1 0.000 exon (NM_000064, exon 37 of 41) exon (NM_000064, exon 37 of 41) -8819 NM_003807 8740 Hs.129708 NM_003807 ENSG00000125735 TNFSF14 CD258|HVEML|LIGHT|LTg TNF superfamily member 14 protein-coding chr8-1906 chr8 29778185 29778395 + 10.1 0.000 intron (NR_125815, intron 1 of 3) intron (NR_125815, intron 1 of 3) 29981 NR_125814 101929450 Hs.512440 NR_125814 ENSG00000253490 LINC02099 - long intergenic non-protein coding RNA 2099 ncRNA chr7-5371 chr7 31447372 31447582 + 10.1 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -66594 NM_001257967 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr3-10172 chr3 117291815 117292025 + 10.1 0.000 Intergenic Intergenic 370489 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr8-5105 chr8 59237246 59237456 + 10.1 0.000 Intergenic Intergenic 118141 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr11-4908 chr11 62645806 62646016 + 10.1 0.000 TTS (NM_030628) TTS (NM_030628) 702 NM_001278192 23193 Hs.595071 NM_014610 ENSG00000089597 GANAB G2AN|GIIA|GLUII|PKD3 glucosidase II alpha subunit protein-coding chr10-4782 chr10 5831087 5831297 + 10.1 0.000 Intergenic LTR16A|LTR|ERVL -17643 NM_001115156 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr17-5126 chr17 7229809 7230019 + 10.1 0.000 exon (NM_004422, exon 5 of 15) exon (NM_004422, exon 5 of 15) 4603 NM_004422 1856 Hs.118640 NM_004422 ENSG00000004975 DVL2 - dishevelled segment polarity protein 2 protein-coding chr2-4118 chr2 156467072 156467282 + 10.1 0.000 intron (NM_000408, intron 1 of 16) intron (NM_000408, intron 1 of 16) 30798 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr3-3437 chr3 128698691 128698901 + 10.1 0.000 Intergenic Intergenic -27340 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr10-3610 chr10 93222070 93222280 + 10.1 0.000 Intergenic L2a|LINE|L2 148282 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr11-1820 chr11 33706434 33706644 + 10.1 0.000 3' UTR (NM_203330, exon 6 of 6) 3' UTR (NM_203330, exon 6 of 6) -5799 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr11-4361 chr11 74191526 74191736 + 10.1 0.000 intron (NM_001271593, intron 1 of 13) MSTB-int|LTR|ERVL-MaLR 20342 NM_016147 51400 Hs.503251 NM_016147 ENSG00000214517 PPME1 ABDH19|PME-1 protein phosphatase methylesterase 1 protein-coding chr18-2225 chr18 67566431 67566641 + 10.1 0.000 intron (NR_033921, intron 1 of 4) MLT1D|LTR|ERVL-MaLR -49816 NM_032160 92126 Hs.124673 NM_032160 ENSG00000171451 DSEL C18orf4|DE-epi2 dermatan sulfate epimerase like protein-coding chr20-2198 chr20 53623512 53623722 + 10.1 0.000 intron (NR_134576, intron 2 of 2) intron (NR_134576, intron 2 of 2) 15263 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr18-547 chr18 42333098 42333308 + 10.1 0.000 intron (NR_046457, intron 4 of 6) intron (NR_046457, intron 4 of 6) 146535 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr8-3421 chr8 72202002 72202212 + 10.1 0.000 TTS (NR_033867) TTS (NR_033867) 49527 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo chr11-3958 chr11 1217062 1217272 + 10.1 0.000 Intergenic L1MB3|LINE|L1 -5899 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr10-5164 chr10 56845308 56845518 + 10.1 0.000 Intergenic MER101B|LTR|ERV1 459146 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr9-4008 chr9 34771340 34771550 + 10.1 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -41957 NM_001141917 259308 Hs.522093 NM_001141917 ENSG00000205108 FAM205A C9orf144B family with sequence similarity 205 member A protein-coding chr2-7308 chr2 240383791 240384001 + 10.1 0.000 Intergenic Intergenic -51767 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr8-1675 chr8 41393705 41393915 + 10.1 0.000 Intergenic L2|LINE|L2 -32845 NR_145746 109616980 NR_145746 ENSG00000238936 SNORD65B - small nucleolar RNA, C/D box 65B snoRNA chr19-2318 chr19 18293183 18293393 + 10.1 0.000 Intergenic Intergenic 11211 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA chr4-3008 chr4 125254144 125254354 + 10.1 0.000 Intergenic Intergenic -62163 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr2-9282 chr2 221713839 221714049 + 10.1 0.000 Intergenic Intergenic -139742 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chrX-1363 chrX 149829702 149829912 + 10.1 0.000 intron (NR_109813, intron 1 of 2) HERVIP10B3-int|LTR|ERV1 4099 NR_109813 101241891 Hs.744829 NR_109813 ENSG00000280752 LINC00850 KUCG1 long intergenic non-protein coding RNA 850 ncRNA chr14-1720 chr14 32073578 32073788 + 10.1 0.000 Intergenic Intergenic 3016 NR_027263 84837 Hs.496755 NM_032751 ARHGAP5-AS1 C14orf128 ARHGAP5 antisense RNA 1 (head to head) ncRNA chr8-1636 chr8 102600795 102601005 + 10.1 0.000 Intergenic CpG 49311 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr1-9829 chr1 61125489 61125699 + 10.1 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 43033 NM_005595 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr22-4121 chr22 44172115 44172325 + 10.1 0.000 promoter-TSS (NM_001137605) promoter-TSS (NM_001137605) -736 NM_001137605 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr4-1381 chr4 101021087 101021297 + 10.1 0.000 Intergenic Intergenic 219680 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr10-3715 chr10 112764098 112764308 + 10.1 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -59293 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr21-1760 chr21 35850128 35850338 + 10.1 0.000 Intergenic Intergenic -36212 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr8-2243 chr8 37380115 37380325 + 10.1 0.000 Intergenic AluJo|SINE|Alu 113693 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chrX-2513 chrX 95424985 95425195 + 10.1 0.000 Intergenic L1MEc|LINE|L1 -361864 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr11-4005 chr11 5819834 5820044 + 10.1 0.000 promoter-TSS (NM_001005174) promoter-TSS (NM_001005174) -397 NM_001005174 390077 Hs.553737 NM_001005174 ENSG00000180988 OR52N2 OR11-57 olfactory receptor family 52 subfamily N member 2 protein-coding chr10-5797 chr10 107024499 107024709 + 10.1 0.000 intron (NM_001206569, intron 1 of 25) intron (NM_001206569, intron 1 of 25) 140102 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr18-642 chr18 34529975 34530185 + 10.1 0.000 intron (NM_001198945, intron 1 of 10) intron (NM_001198945, intron 1 of 10) 36768 NM_032979 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr3-1589 chr3 159711789 159711999 + 10.1 0.000 intron (NM_001197108, intron 1 of 6) LTR67B|LTR|ERVL 56718 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr2-4295 chr2 234289857 234290067 + 10.1 0.000 Intergenic Intergenic 164633 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr1-12614 chr1 37650200 37650410 + 10.1 0.000 Intergenic Intergenic -15413 NM_001242910 284654 Hs.135015 NM_173640 ENSG00000169218 RSPO1 CRISTIN3|RSPO R-spondin 1 protein-coding chr2-14536 chr2 229779669 229779879 + 10.1 0.000 intron (NM_001348330, intron 34 of 41) MER5B|DNA|hAT-Charlie -65219 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr4-8369 chr4 148411747 148411957 + 10.1 0.000 intron (NM_000901, intron 2 of 8) intron (NM_000901, intron 2 of 8) 30562 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr2-12693 chr2 76880127 76880337 + 10.1 0.000 intron (NR_146416, intron 1 of 1) Tigger1|DNA|TcMar-Tigger -105733 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr12-1259 chr12 50924470 50924680 + 10.1 0.000 promoter-TSS (NM_014033) promoter-TSS (NM_014033) -440 NM_014033 25840 Hs.711113 NM_014033 ENSG00000185432 METTL7A AAM-B|AAMB methyltransferase like 7A protein-coding chr7-1893 chr7 149220727 149220937 + 10.1 0.000 intron (NM_001303481, intron 7 of 8) intron (NM_001303481, intron 7 of 8) -18819 NM_012256 7988 Hs.490510 NM_012256 ENSG00000170260 ZNF212 C2H2-150|ZNF182|ZNFC150 zinc finger protein 212 protein-coding chr4-3931 chr4 162974083 162974293 + 10.1 0.000 Intergenic L2b|LINE|L2 119440 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr3-4037 chr3 71056453 71056663 + 10.1 0.000 intron (NR_146142, intron 7 of 19) intron (NR_146142, intron 7 of 19) 8366 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr10-4978 chr10 30398401 30398611 + 10.1 0.000 Intergenic Intergenic -26599 NR_120609 729668 Hs.652158 NR_003524 GOLGA2P6 - GOLGA2 pseudogene 6 pseudo chr22-1620 chr22 29689832 29690042 + 10.1 0.000 intron (NM_181832, intron 16 of 16) intron (NM_181832, intron 16 of 16) -30066 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr7-6552 chr7 51134371 51134581 + 10.1 0.000 intron (NM_015198, intron 6 of 12) intron (NM_015198, intron 6 of 12) 182333 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr13-1706 chr13 91175893 91176103 + 10.1 0.000 intron (NR_047004, intron 2 of 3) L1PA5|LINE|L1 35700 NR_047004 100874150 Hs.711947 NR_047004 LINC00379 - long intergenic non-protein coding RNA 379 ncRNA chr1-8720 chr1 230292869 230293079 + 10.1 0.000 Intergenic Intergenic 133358 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr4-1370 chr4 61202641 61202851 + 10.1 0.000 intron (NM_001371342, intron 1 of 20) CpG-21235 574 NM_001371342 chr20-1782 chr20 57195350 57195560 + 10.1 0.000 intron (NM_001719, intron 3 of 6) intron (NM_001719, intron 3 of 6) -18241 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr16-4240 chr16 19995174 19995384 + 10.1 0.000 Intergenic Intergenic 78499 NM_001002911 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr10-8688 chr10 101325655 101325865 + 10.1 0.000 Intergenic Intergenic -28273 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr6-2893 chr6 12266597 12266807 + 10.1 0.000 Intergenic L2b|LINE|L2 -23659 NM_001168319 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr1-11172 chr1 239720151 239720361 + 10.1 0.000 intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) -1137 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr5-3226 chr5 92017923 92018133 + 10.1 0.000 Intergenic Intergenic -634711 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr7-4866 chr7 106693956 106694166 + 10.1 0.000 Intergenic MER5A1|DNA|hAT-Charlie -32903 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr5-2688 chr5 61811071 61811281 + 10.1 0.000 Intergenic L1MC4|LINE|L1 -75478 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr4-6543 chr4 176197966 176198176 + 10.1 0.000 Intergenic Intergenic -2486 NM_144644 132851 Hs.481235 NM_144644 ENSG00000150628 SPATA4 SPEF1B|TSARG2 spermatogenesis associated 4 protein-coding chr7-6101 chr7 119158316 119158526 + 10.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 748954 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr3-4503 chr3 74772217 74772427 + 10.1 0.000 Intergenic Intergenic -251182 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr12-7555 chr12 72098675 72098885 + 10.1 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 159935 NM_173353 121278 Hs.736576 NM_173353 ENSG00000139287 TPH2 ADHD7|NTPH tryptophan hydroxylase 2 protein-coding chr1-2775 chr1 156225521 156225731 + 10.1 0.000 exon (NM_001199654, exon 2 of 5) exon (NM_001199654, exon 2 of 5) 12638 NM_007221 11243 Hs.530479 NM_007221 ENSG00000160783 PMF1 - polyamine modulated factor 1 protein-coding chr14-3132 chr14 67783522 67783732 + 10.1 0.000 intron (NM_015346, intron 20 of 41) L1ME4b|LINE|L1 32963 NM_015346 23503 Hs.98041 NM_015346 ENSG00000072121 ZFYVE26 FYVE-CENT|SPG15 zinc finger FYVE-type containing 26 protein-coding chr5-2470 chr5 139295713 139295923 + 10.1 0.000 intron (NM_001194956, intron 1 of 13) intron (NM_001194956, intron 1 of 13) 2068 NM_001194956 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding chr3-11084 chr3 185018776 185018986 + 10.1 0.000 intron (NM_001009921, intron 44 of 46) HERVK9-int|LTR|ERVK 134179 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr3-4121 chr3 114449891 114450101 + 10.1 0.000 intron (NM_001348805, intron 7 of 10) intron (NM_001348805, intron 7 of 10) -3597 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr18-753 chr18 111825 112035 + 10.1 0.000 promoter-TSS (NR_160777) promoter-TSS (NR_160777) -168 NR_160777 727758 Hs.585843 NR_033770 ENSG00000263006 ROCK1P1 ROCK1P Rho associated coiled-coil containing protein kinase 1 pseudogene 1 pseudo chr6-4447 chr6 34544098 34544308 + 10.1 0.000 exon (NM_001252294, exon 2 of 5) exon (NM_001252294, exon 2 of 5) 12126 NM_012391 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr3-6393 chr3 97496538 97496748 + 10.1 0.000 intron (NM_001080448, intron 10 of 17) intron (NM_001080448, intron 10 of 17) 57036 NM_001278300 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr14-5407 chr14 104284438 104284648 + 10.1 0.000 intron (NR_146612, intron 1 of 2) intron (NR_146612, intron 1 of 2) 60959 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chrX-1917 chrX 150457964 150458174 + 10.1 0.000 intron (NM_001177466, intron 1 of 5) intron (NM_001177466, intron 1 of 5) 12615 NM_005491 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr17-2142 chr17 38880134 38880344 + 10.1 0.000 intron (NM_001271608, intron 2 of 5) intron (NM_001271608, intron 2 of 5) 10181 NM_006148 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr7-5583 chr7 47901689 47901899 + 10.1 0.000 intron (NM_138295, intron 13 of 56) intron (NM_138295, intron 13 of 56) 46697 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr13-2704 chr13 91530229 91530439 + 10.1 0.000 intron (NM_004466, intron 2 of 7) MER63A|DNA|hAT-Blackjack 131713 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr10-4175 chr10 96511356 96511566 + 10.1 0.000 intron (NM_012465, intron 1 of 20) intron (NM_012465, intron 1 of 20) 2465 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr22-1606 chr22 20750809 20751019 + 10.1 0.000 intron (NM_058004, intron 27 of 54) intron (NM_058004, intron 27 of 54) -23199 NM_000185 3053 Hs.474270 NM_000185 ENSG00000099937 SERPIND1 D22S673|HC2|HCF2|HCII|HLS2|LS2|THPH10 serpin family D member 1 protein-coding chr17-2056 chr17 57987024 57987234 + 10.1 0.000 intron (NM_001330393, intron 1 of 6) intron (NM_001330393, intron 1 of 6) 1125 NM_001330393 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding chr4-2834 chr4 44760154 44760364 + 10.1 0.000 Intergenic Intergenic -33625 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr5-4153 chr5 94378323 94378533 + 10.1 0.000 intron (NM_001145678, intron 20 of 20) L1PA15|LINE|L1 240176 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr4-3084 chr4 150250350 150250560 + 10.1 0.000 intron (NM_001040260, intron 15 of 15) intron (NM_001040260, intron 15 of 15) 172010 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr9-2991 chr9 83965040 83965250 + 10.1 0.000 Intergenic LTR16A1|LTR|ERVL 4712 NR_029605 407043 NR_029605 ENSG00000284179 MIR7-1 MIRN7-1|hsa-mir-7-1|mir-7-1 microRNA 7-1 ncRNA chr2-8625 chr2 144078148 144078358 + 10.1 0.000 intron (NM_001354355, intron 7 of 13) intron (NM_001354355, intron 7 of 13) 133326 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr3-4226 chr3 135629627 135629837 + 10.1 0.000 Intergenic Intergenic -335996 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr3-4050 chr3 75358603 75358813 + 10.1 0.000 Intergenic SATR2|Satellite|Satellite 76407 NR_024241 692099 Hs.591652 NR_024241 ENSG00000244026 FAM86DP FAM86D family with sequence similarity 86 member D, pseudogene pseudo chr16-3816 chr16 54193615 54193825 + 10.1 0.000 Intergenic Intergenic 77159 NR_126340 100996338 Hs.232014 NR_126340 LINC02169 - long intergenic non-protein coding RNA 2169 ncRNA chr8-1397 chr8 37871511 37871721 + 10.1 0.000 exon (NM_001002814, exon 4 of 6) exon (NM_001002814, exon 4 of 6) -21755 NM_018310 55290 Hs.709301 NM_018310 ENSG00000104221 BRF2 BRFU|TFIIIB50 BRF2 RNA polymerase III transcription initiation factor subunit protein-coding chr8-3197 chr8 118039978 118040188 + 10.1 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 71736 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr9-2356 chr9 97978963 97979173 + 10.1 0.000 Intergenic Intergenic -4273 NM_006401 10541 Hs.730654 NM_006401 ENSG00000136938 ANP32B APRIL|PHAPI2|SSP29 acidic nuclear phosphoprotein 32 family member B protein-coding chr20-2409 chr20 20010643 20010853 + 10.1 0.000 Intergenic Intergenic -6542 NM_181528 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr4-8387 chr4 150421622 150421832 + 10.1 0.000 intron (NM_001367550, intron 46 of 56) intron (NM_001367550, intron 46 of 56) -157362 NR_149035 729558 Hs.647978 NR_149035 ENSG00000249690 LOC729558 - uncharacterized LOC729558 ncRNA chr8-1942 chr8 51502370 51502580 + 10.1 0.000 intron (NM_144651, intron 4 of 22) intron (NM_144651, intron 4 of 22) 306970 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr21-930 chr21 36483176 36483386 + 10.1 0.000 intron (NM_001146077, intron 2 of 2) intron (NM_001146077, intron 2 of 2) -3159 NM_001146079 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr10-1513 chr10 30784009 30784219 + 10.1 0.000 Intergenic Intergenic 60895 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr7-3091 chr7 5232538 5232748 + 10.1 0.000 3' UTR (NM_001033518, exon 13 of 13) 3' UTR (NM_001033518, exon 13 of 13) 18374 NM_001033520 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr9-6941 chr9 97819724 97819934 + 10.1 0.000 intron (NR_147055, intron 1 of 10) intron (NR_147055, intron 1 of 10) 33251 NR_147055 101928337 NR_147055 ENSG00000236130 PTCSC2 - papillary thyroid carcinoma susceptibility candidate 2 ncRNA chr16-4605 chr16 68793344 68793554 + 10.1 0.000 intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) -50082 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr2-5159 chr2 28233255 28233465 + 10.1 0.000 intron (NM_199193, intron 8 of 13) intron (NM_199193, intron 8 of 13) -26399 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr19-3821 chr19 10359999 10360209 + 10.1 0.000 intron (NM_003331, intron 14 of 24) AluSx|SINE|Alu 20468 NM_003331 7297 Hs.75516 NM_003331 ENSG00000105397 TYK2 IMD35|JTK1 tyrosine kinase 2 protein-coding chr21-722 chr21 35925609 35925819 + 10.1 0.000 Intergenic Intergenic 39269 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr21-755 chr21 42781569 42781779 + 10.1 0.000 Intergenic Intergenic -1680 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr4-4244 chr4 18150602 18150812 + 10.1 0.000 Intergenic Intergenic -128832 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr6-6300 chr6 42293002 42293212 + 10.1 0.000 intron (NM_001297573, intron 4 of 17) intron (NM_001297573, intron 4 of 17) -75246 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr1-4855 chr1 29230755 29230965 + 10.1 0.000 promoter-TSS (NM_001024732) promoter-TSS (NM_001024732) 74 NM_001349715 51102 Hs.183646 NM_016011 ENSG00000116353 MECR CGI-63|DYTOABG|ETR1|FASN2B|NRBF1 mitochondrial trans-2-enoyl-CoA reductase protein-coding chr5-2161 chr5 108600862 108601072 + 10.1 0.000 Intergenic MLT1M|LTR|ERVL-MaLR 127294 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr6-4639 chr6 47884503 47884713 + 10.1 0.000 intron (NM_001013732, intron 2 of 2) intron (NM_001013732, intron 2 of 2) 97540 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr1-2854 chr1 155700638 155700848 + 10.1 0.000 intron (NM_033657, intron 1 of 12) SVA_F|Retroposon|SVA 11649 NM_033657 7818 Hs.516746 NM_004632 ENSG00000132676 DAP3 DAP-3|MRP-S29|MRPS29|S29mt|bMRP-10 death associated protein 3 protein-coding chr15-3560 chr15 36632308 36632518 + 10.1 0.000 intron (NM_001290232, intron 1 of 10) LTR48|LTR|ERV1 37536 NM_001290232 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr12-2603 chr12 122032467 122032677 + 10.1 0.000 intron (NM_001024808, intron 2 of 5) intron (NM_001024808, intron 2 of 5) 10688 NM_020993 605 Hs.530970 NM_020993 ENSG00000110987 BCL7A BCL7 BAF chromatin remodeling complex subunit BCL7A protein-coding chr9-4890 chr9 6108883 6109093 + 10.1 0.000 Intergenic Intergenic -93364 NM_012416 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr11-3919 chr11 121892925 121893135 + 10.1 0.000 Intergenic Intergenic 206814 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr2-4813 chr2 52821755 52821965 + 10.1 0.000 Intergenic Intergenic -119245 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr11-5676 chr11 130223248 130223458 + 10.1 0.000 Intergenic L2c|LINE|L2 63571 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr2-5128 chr2 23626917 23627127 + 10.1 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 241843 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr1-8433 chr1 94270764 94270974 + 10.1 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -23123 NM_001328665 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chrX-2543 chrX 99777786 99777996 + 10.1 0.000 Intergenic L1MA1|LINE|L1 632382 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chrX-3611 chrX 84737552 84737762 + 10.1 0.000 Intergenic MER61B|LTR|ERV1 -196494 NR_024062 100131816 Hs.460809 NM_178567 ENSG00000229547 UBE2DNL - ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene) pseudo chr2-8859 chr2 174931700 174931910 + 10.1 0.000 intron (NM_001025201, intron 4 of 12) L2a|LINE|L2 73448 NM_001822 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr22-2893 chr22 46278208 46278418 + 10.1 0.000 intron (NM_017931, intron 5 of 13) MLT1C|LTR|ERVL-MaLR 10305 NM_017931 55020 Hs.435832 NM_017931 ENSG00000075234 TTC38 LL22NC03-5H6.5 tetratricopeptide repeat domain 38 protein-coding chr19-2998 chr19 42793652 42793862 + 10.1 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 -28079 NM_182707 440533 Hs.466843 NM_182707 ENSG00000124467 PSG8 PSG1 pregnancy specific beta-1-glycoprotein 8 protein-coding chr5-2368 chr5 81694848 81695058 + 10.1 0.000 intron (NM_012446, intron 1 of 16) AluJr|SINE|Alu 56300 NM_001256736 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chrX-2909 chrX 151084855 151085065 + 10.1 0.000 Intergenic MamGypLTR1d|LTR|Gypsy -83262 NR_036256 100422930 NR_036256 ENSG00000265789 MIR4330 - microRNA 4330 ncRNA chr15-1385 chr15 25172062 25172272 + 10.1 0.000 promoter-TSS (NR_003294) promoter-TSS (NR_003294) -468 NR_003294 100033437 NR_003294 ENSG00000199712 SNORD115-2 HBII-52-2 small nucleolar RNA, C/D box 115-2 snoRNA chr13-2064 chr13 54676447 54676657 + 10.1 0.000 Intergenic LTR12C|LTR|ERV1 -364504 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr20-3407 chr20 40837942 40838152 + 10.1 0.000 Intergenic Intergenic -123424 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr13-2549 chr13 65095758 65095968 + 10.1 0.000 Intergenic MER47B|DNA|TcMar-Tigger -770184 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr10-6527 chr10 68611221 68611431 + 10.1 0.000 intron (NM_030625, intron 3 of 11) AluJr|SINE|Alu 50989 NM_030625 80312 Hs.258855 NM_030625 ENSG00000138336 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding chr8-2454 chr8 123289122 123289332 + 10.1 0.000 Intergenic Intergenic -13686 NR_037873 11244 Hs.521800 NM_007222 ENSG00000165156 ZHX1 - zinc fingers and homeoboxes 1 protein-coding chr1-9768 chr1 55523244 55523454 + 10.1 0.000 Intergenic Intergenic 297708 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr14-4321 chr14 22122282 22122492 + 10.1 0.000 Intergenic Intergenic 310366 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr1-4180 chr1 35707995 35708205 + 10.1 0.000 Intergenic CpG 8811 NM_001348691 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr20-1653 chr20 25549170 25549380 + 10.1 0.000 intron (NM_025176, intron 1 of 23) intron (NM_025176, intron 1 of 23) 36256 NM_025176 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr1-9410 chr1 31948286 31948496 + 10.1 0.000 Intergenic AluSz6|SINE|Alu -10023 NM_080391 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr1-6418 chr1 15070237 15070447 + 10.1 0.000 intron (NM_201628, intron 8 of 14) intron (NM_201628, intron 8 of 14) 82122 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr14-1997 chr14 52871776 52871986 + 10.1 0.000 intron (NM_006832, intron 10 of 14) intron (NM_006832, intron 10 of 14) 79169 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr16-4407 chr16 50696546 50696756 + 10.1 0.000 promoter-TSS (NM_022162) promoter-TSS (NM_022162) -297 NM_022162 64127 Hs.592072 NM_022162 ENSG00000167207 NOD2 ACUG|BLAU|BLAUS|CARD15|CD|CLR16.3|IBD1|NLRC2|NOD2B|PSORAS1|YAOS nucleotide binding oligomerization domain containing 2 protein-coding chr1-7980 chr1 203534588 203534798 + 10.1 0.000 Intergenic Intergenic 40540 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr4-5242 chr4 169456964 169457174 + 10.1 0.000 intron (NM_001199400, intron 24 of 32) L1MA3|LINE|L1 155514 NM_001199398 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr9-5535 chr9 108241816 108242026 + 10.1 0.000 Intergenic Intergenic 614065 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr3-4761 chr3 102275091 102275301 + 10.1 0.000 Intergenic L1MA3|LINE|L1 111491 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr1-10440 chr1 159653565 159653775 + 10.1 0.000 Intergenic L1M4a1|LINE|L1 60919 NM_001329057 1401 Hs.76452 NM_000567 ENSG00000132693 CRP PTX1 C-reactive protein protein-coding chr16-3043 chr16 53446460 53446670 + 10.1 0.000 intron (NM_001323608, intron 3 of 22) intron (NM_001323608, intron 3 of 22) 10946 NM_001323611 5934 Hs.513609 NM_005611 ENSG00000103479 RBL2 P130|Rb2 RB transcriptional corepressor like 2 protein-coding chr12-3473 chr12 120759349 120759559 + 10.1 0.000 Intergenic Intergenic 33628 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr12-3918 chr12 130203255 130203465 + 10.1 0.000 Intergenic Intergenic 40901 NM_007197 11211 Hs.31664 NM_007197 ENSG00000111432 FZD10 CD350|FZ-10|Fz10|FzE7|hFz10 frizzled class receptor 10 protein-coding chr9-6880 chr9 85904976 85905186 + 10.1 0.000 Intergenic Intergenic -36061 NM_001321881 60560 Hs.436098 NM_021929 ENSG00000135040 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding chr12-4203 chr12 99283422 99283632 + 10.1 0.000 intron (NM_152788, intron 12 of 25) intron (NM_152788, intron 12 of 25) -128437 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr10-2763 chr10 123536666 123536876 + 10.1 0.000 Intergenic L2b|LINE|L2 -129584 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr2-5508 chr2 147294842 147295052 + 10.1 0.000 Intergenic Eulor5A|DNA?|DNA? -549570 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr7-8837 chr7 86541393 86541603 + 10.1 0.000 Intergenic Intergenic -102411 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chr18-256 chr18 46387764 46387974 + 10.1 0.000 intron (NM_001256758, intron 1 of 5) MER117|DNA|hAT-Charlie 53645 NR_046357 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr8-2159 chr8 42484070 42484280 + 10.1 0.000 intron (NM_006749, intron 1 of 10) intron (NM_006749, intron 1 of 10) 17056 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr5-5015 chr5 83804027 83804237 + 10.1 0.000 Intergenic Intergenic -83277 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr12-2938 chr12 85036258 85036468 + 10.1 0.000 promoter-TSS (NM_001100917) promoter-TSS (NM_001100917) 12 NM_001079910 84125 Hs.402200 NM_032165 ENSG00000133640 LRRIQ1 - leucine rich repeats and IQ motif containing 1 protein-coding chr15-1530 chr15 62782133 62782343 + 10.1 0.000 intron (NM_015059, intron 41 of 55) intron (NM_015059, intron 41 of 55) -41719 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr5-7159 chr5 3482378 3482588 + 10.1 0.000 intron (NR_033898, intron 2 of 4) intron (NR_033898, intron 2 of 4) 21521 NR_104618 102467075 Hs.652949 NR_104618 ENSG00000250716 LINC01017 - long intergenic non-protein coding RNA 1017 ncRNA chr17-6141 chr17 81494734 81494944 + 10.1 0.000 Intergenic Intergenic 17960 NM_001614 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chrX-1358 chrX 147376291 147376501 + 10.1 0.000 Intergenic L1PA16|LINE|L1 -91668 NR_030240 574518 NR_030240 ENSG00000207867 MIR514A3 MIR514-3|MIRN514-3|hsa-mir-514a-3 microRNA 514a-3 ncRNA chr1-11161 chr1 237529009 237529219 + 10.1 0.000 intron (NM_001035, intron 24 of 104) L2b|LINE|L2 57995 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr5-9051 chr5 170163050 170163260 + 10.1 0.000 Intergenic Intergenic 35986 NR_108022 100507267 Hs.634846 NR_108022 LINC01187 CTB-27N1.1|KIDR long intergenic non-protein coding RNA 1187 ncRNA chr10-5032 chr10 35025998 35026208 + 10.1 0.000 intron (NM_003591, intron 16 of 20) intron (NM_003591, intron 16 of 20) 48180 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr5-2572 chr5 52999553 52999763 + 10.1 0.000 intron (NR_073107, intron 1 of 28) LTR40c|LTR|ERVL 10306 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr13-2680 chr13 86660187 86660397 + 10.1 0.000 Intergenic Intergenic -251628 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chrX-2519 chrX 96443724 96443934 + 10.1 0.000 Intergenic Intergenic -105927 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr5-3577 chr5 76502535 76502745 + 10.1 0.000 intron (NM_006633, intron 2 of 35) intron (NM_006633, intron 2 of 35) -44769 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr20-2040 chr20 2162367 2162577 + 10.1 0.000 Intergenic L2a|LINE|L2 -44456 NR_161305 388780 Hs.132163 NR_161305 LOC388780 - uncharacterized LOC388780 ncRNA chr11-6708 chr11 79146606 79146816 + 10.1 0.000 intron (NM_001098816, intron 4 of 33) intron (NM_001098816, intron 4 of 33) 255398 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr8-2678 chr8 89241369 89241579 + 10.1 0.000 Intergenic Intergenic 516237 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr10-5487 chr10 80314255 80314465 + 10.1 0.000 Intergenic Intergenic -24702 NM_000429 4143 Hs.282670 NM_000429 ENSG00000151224 MAT1A MAT|MATA1|SAMS|SAMS1 methionine adenosyltransferase 1A protein-coding chr11-7164 chr11 128728056 128728266 + 10.1 0.000 intron (NM_002017, intron 1 of 8) intron (NM_002017, intron 1 of 8) -32138 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr3-6881 chr3 153781162 153781372 + 10.1 0.000 Intergenic HAL1|LINE|L1 -18741 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr6-1870 chr6 70166430 70166640 + 10.1 0.000 intron (NM_001858, intron 37 of 50) intron (NM_001858, intron 37 of 50) 116662 NM_078485 1297 Hs.590892 NM_001851 ENSG00000112280 COL9A1 DJ149L1.1.2|EDM6|MED|STL4 collagen type IX alpha 1 chain protein-coding chr9-5494 chr9 102922980 102923190 + 10.1 0.000 Intergenic Intergenic -72248 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr17-5965 chr17 76807570 76807780 + 10.1 0.000 TTS (NR_110837) TTS (NR_110837) 8631 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr4-5311 chr4 180516319 180516529 + 10.1 0.000 Intergenic L2a|LINE|L2 642725 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr9-5523 chr9 107395131 107395341 + 10.1 0.000 Intergenic Intergenic 71349 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr7-5495 chr7 43365258 43365468 + 10.1 0.000 intron (NM_001287059, intron 5 of 27) intron (NM_001287059, intron 5 of 27) 157179 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr12-3667 chr12 120984243 120984453 + 10.1 0.000 intron (NM_001306179, intron 1 of 9) GA-rich|Low_complexity|Low_complexity 5780 NM_000545 6927 Hs.654455 NM_000545 ENSG00000135100 HNF1A HNF-1A|HNF1|HNF4A|IDDM20|LFB1|MODY3|TCF-1|TCF1 HNF1 homeobox A protein-coding chr3-1343 chr3 127822451 127822661 + 10.1 0.000 5' UTR (NM_001256585, exon 1 of 7) 5' UTR (NM_001256585, exon 1 of 7) 326 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr10-2801 chr10 133423592 133423802 + 10.1 0.000 5' UTR (NM_001012508, exon 2 of 2) 5' UTR (NM_001012508, exon 2 of 2) 920 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chr2-3790 chr2 18008773 18008983 + 10.1 0.000 Intergenic Intergenic 130211 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr12-5366 chr12 119179643 119179853 + 10.1 0.000 intron (NM_014365, intron 1 of 2) intron (NM_014365, intron 1 of 2) 958 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr3-5531 chr3 830061 830271 + 10.1 0.000 intron (NR_110118, intron 2 of 3) THE1D-int|LTR|ERVL-MaLR 238061 NR_110118 101927215 Hs.650700 NR_110118 ENSG00000224957 LINC01266 - long intergenic non-protein coding RNA 1266 ncRNA chr10-4598 chr10 113494749 113494959 + 10.1 0.000 Intergenic Intergenic -55977 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr20-1712 chr20 38319410 38319620 + 10.1 0.000 intron (NM_001725, intron 6 of 14) MIRb|SINE|MIR 15365 NM_001725 671 Hs.529019 NM_001725 ENSG00000101425 BPI BPIFD1|rBPI bactericidal permeability increasing protein protein-coding chr4-2927 chr4 93039499 93039709 + 10.1 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 735205 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr7-1383 chr7 137592311 137592521 + 10.1 0.000 intron (NM_001321710, intron 12 of 32) intron (NM_001321710, intron 12 of 32) -248683 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chrX-2124 chrX 29663349 29663559 + 10.1 0.000 intron (NM_014271, intron 5 of 10) intron (NM_014271, intron 5 of 10) 89176 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr1-3855 chr1 38140160 38140370 + 10.1 0.000 Intergenic Intergenic 51034 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr12-3086 chr12 13405310 13405520 + 10.1 0.000 Intergenic Intergenic -28670 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr6-1801 chr6 130680569 130680779 + 10.1 0.000 Intergenic AluSz6|SINE|Alu -146731 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr5-5427 chr5 137095680 137095890 + 10.1 0.000 intron (NM_004598, intron 5 of 10) intron (NM_004598, intron 5 of 10) -32412 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr11-6737 chr11 82435836 82436046 + 10.1 0.000 Intergenic Intergenic -32028 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr7-2460 chr7 658447 658657 + 10.1 0.000 intron (NM_001164760, intron 4 of 10) L1MC5|LINE|L1 53972 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr7-6417 chr7 156011832 156012042 + 10.1 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 49305 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr2-14082 chr2 199211723 199211933 + 10.1 0.000 Intergenic L1M3|LINE|L1 246111 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr1-16427 chr1 226354013 226354223 + 10.1 0.000 Intergenic Intergenic -44351 NM_001270410 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr14-2460 chr14 82631089 82631299 + 10.1 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -11438 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr15-2668 chr15 77300062 77300272 + 10.1 0.000 intron (NM_024776, intron 1 of 7) intron (NM_024776, intron 1 of 7) -74763 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr17-5770 chr17 61504638 61504848 + 10.1 0.000 Intergenic L2|LINE|L2 48255 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr2-9185 chr2 215499586 215499796 + 10.1 0.000 Intergenic Intergenic 45984 NR_110607 102724849 Hs.116161 NR_110607 ENSG00000225166 LOC102724849 - uncharacterized LOC102724849 ncRNA chr10-5780 chr10 104447401 104447611 + 10.1 0.000 intron (NM_001008723, intron 15 of 17) intron (NM_001008723, intron 15 of 17) 32769 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr19-4161 chr19 38320074 38320284 + 10.1 0.000 exon (NM_004823, exon 1 of 3) exon (NM_004823, exon 1 of 3) 334 NM_004823 9424 Hs.240395 NM_004823 ENSG00000099337 KCNK6 K2p6.1|KCNK8|TOSS|TWIK-2|TWIK2 potassium two pore domain channel subfamily K member 6 protein-coding chr2-6550 chr2 217218351 217218561 + 10.1 0.000 Intergenic L3|LINE|CR1 -64277 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2-14699 chr2 238043075 238043285 + 10.1 0.000 TTS (NR_103499) TTS (NR_103499) -17821 NM_016510 51540 Hs.731909 NM_016510 ENSG00000132330 SCLY SCL|hSCL selenocysteine lyase protein-coding chr1-5270 chr1 205210901 205211111 + 10.1 0.000 intron (NM_199462, intron 1 of 11) CpG 696 NM_199462 25778 Hs.6874 NM_015375 ENSG00000133059 DSTYK CAKUT1|DustyPK|HDCMD38P|RIP5|RIPK5|SPG23 dual serine/threonine and tyrosine protein kinase protein-coding chr14-3106 chr14 65263437 65263647 + 10.1 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -41195 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr5-1217 chr5 128538430 128538640 + 10.1 0.000 promoter-TSS (NM_001999) promoter-TSS (NM_001999) -290 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr1-3280 chr1 228350970 228351180 + 10.1 0.000 intron (NM_052843, intron 77 of 80) intron (NM_052843, intron 77 of 80) 46034 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr1-10926 chr1 210681111 210681321 + 10.1 0.000 3' UTR (NM_172362, exon 11 of 11) 3' UTR (NM_172362, exon 11 of 11) 351850 NM_001170580 55733 Hs.58650 NM_018194 ENSG00000054392 HHAT MART2|SKI1|Skn hedgehog acyltransferase protein-coding chr21-1292 chr21 42623934 42624144 + 10.1 0.000 Intergenic Intergenic -8944 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chrX-1930 chrX 154032161 154032371 + 10.1 0.000 exon (NM_001316337, exon 4 of 5) exon (NM_001316337, exon 4 of 5) -12277 NR_031757 100313781 NR_031757 ENSG00000284286 MIR718 hsa-mir-718 microRNA 718 ncRNA chr18-1011 chr18 54257932 54258142 + 10.1 0.000 Intergenic AluSz6|SINE|Alu -11442 NM_001351610 11201 Hs.438533 NM_007195 ENSG00000101751 POLI RAD30B|RAD3OB|eta2 DNA polymerase iota protein-coding chr9-4508 chr9 62822865 62823075 + 10.1 0.000 Intergenic L1PA6|LINE|L1 15376 NR_135128 100132249 Hs.536982 NR_135128 LOC100132249 - uncharacterized LOC100132249 ncRNA chr15-2617 chr15 65763169 65763379 + 10.1 0.000 intron (NM_005848, intron 1 of 31) MamRTE1|LINE|RTE-BovB 29019 NM_005848 10260 Hs.654567 NM_005848 ENSG00000174485 DENND4A IRLB|MYCPBP DENN domain containing 4A protein-coding chr5-4749 chr5 52675249 52675459 + 10.1 0.000 Intergenic Intergenic -112562 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr10-4415 chr10 62162637 62162847 + 10.1 0.000 Intergenic Intergenic 106102 NM_001282941 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding chr6-4856 chr6 87244457 87244667 + 10.1 0.000 intron (NM_015021, intron 6 of 7) intron (NM_015021, intron 6 of 7) -78026 NM_001287445 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr9-4054 chr9 108775270 108775480 + 10.1 0.000 Intergenic Intergenic 80611 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr1-10415 chr1 157544605 157544815 + 10.1 0.000 intron (NM_001195388, intron 4 of 16) intron (NM_001195388, intron 4 of 16) 7805 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chrX-3413 chrX 11870068 11870278 + 10.1 0.000 intron (NM_001368398, intron 2 of 18) intron (NM_001368398, intron 2 of 18) 47734 NM_001368398 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr6-4939 chr6 100906372 100906582 + 10.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -25105 NM_001284271 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr2-7586 chr2 25381532 25381742 + 10.1 0.000 intron (NM_001351394, intron 16 of 17) AluJr|SINE|Alu -39047 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr8-1803 chr8 105159713 105159923 + 10.1 0.000 Intergenic Intergenic -158620 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr1-7864 chr1 98773759 98773969 + 10.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL 112143 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr2-5824 chr2 232663916 232664126 + 10.1 0.000 intron (NM_025202, intron 2 of 3) AluJr|SINE|Alu 30417 NM_025202 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr10-5088 chr10 45761763 45761973 + 10.1 0.000 intron (NM_001367411, intron 17 of 30) intron (NM_001367411, intron 17 of 30) 34602 NM_001367399 253725 Hs.365286 NM_015262 ENSG00000172661 WASHC2C FAM21A|FAM21C|VPEF WASH complex subunit 2C protein-coding chr11-2409 chr11 8874065 8874275 + 10.1 0.000 intron (NM_005418, intron 2 of 22) intron (NM_005418, intron 2 of 22) 36781 NM_005418 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr1-4422 chr1 219461460 219461670 + 10.1 0.000 intron (NR_135822, intron 2 of 3) intron (NR_135822, intron 2 of 3) 95759 NR_135822 102723886 Hs.525963 NR_135822 LYPLAL1-AS1 - LYPLAL1 antisense RNA 1 ncRNA chr16-2781 chr16 27676899 27677109 + 10.1 0.000 intron (NM_015202, intron 6 of 27) intron (NM_015202, intron 6 of 27) 42025 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chrX-2405 chrX 73844451 73844661 + 10.1 0.000 non-coding (NR_001564, exon 1 of 6) non-coding (NR_001564, exon 1 of 6) 8197 NR_001564 7503 Hs.529901 NR_001564 ENSG00000229807 XIST DXS1089|DXS399E|LINC00001|NCRNA00001|SXI1|swd66 X inactive specific transcript ncRNA chr14-2355 chr14 23403757 23403967 + 10.1 0.000 intron (NM_002471, intron 8 of 38) intron (NM_002471, intron 8 of 38) 4415 NM_002471 4624 Hs.278432 NM_002471 ENSG00000197616 MYH6 ASD3|CMD1EE|CMH14|MYHC|MYHCA|SSS3|alpha-MHC myosin heavy chain 6 protein-coding chr14-4804 chr14 66932770 66932980 + 10.1 0.000 intron (NM_020806, intron 8 of 22) MER105|DNA|hAT-Charlie -256565 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding chr2-12790 chr2 86801359 86801569 + 10.1 0.000 intron (NM_001145873, intron 3 of 8) AluJb|SINE|Alu 6932 NM_001145873 925 Hs.85258 NM_001768 ENSG00000153563 CD8A CD8|Leu2|p32 CD8a molecule protein-coding chr16-3953 chr16 87366495 87366705 + 10.1 0.000 intron (NM_001282683, intron 2 of 9) intron (NM_001282683, intron 2 of 9) 17176 NM_024735 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr4-2273 chr4 184717973 184718183 + 10.1 0.000 intron (NR_104593, intron 4 of 11) ERV3-16A3_LTR|LTR|ERVL 16018 NM_024629 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr17-3419 chr17 13736993 13737203 + 10.1 0.000 Intergenic Intergenic -135169 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr1-3454 chr1 31625899 31626109 + 10.1 0.000 intron (NM_001525, intron 8 of 8) intron (NM_001525, intron 8 of 8) 8304 NM_001525 3061 Hs.388226 NM_001525 ENSG00000121764 HCRTR1 OX1R hypocretin receptor 1 protein-coding chr3-4716 chr3 58799236 58799446 + 10.1 0.000 intron (NM_001351532, intron 14 of 14) intron (NM_001351532, intron 14 of 14) -25130 NR_110820 101929238 Hs.683953 NR_110820 ENSG00000242428 C3orf67-AS1 - C3orf67 antisense RNA 1 ncRNA chr1-7922 chr1 161566482 161566692 + 10.1 0.000 Intergenic L2c|LINE|L2 -14752 NR_047648 9103 Hs.656750 NM_201563 FCGR2C CD32|CD32C|CDW32|FCG2|FCRIIC|IGFR2 Fc fragment of IgG receptor IIc (gene/pseudogene) protein-coding chr19-2292 chr19 3171880 3172090 + 10.1 0.000 Intergenic Intergenic -6784 NM_003775 8698 Hs.662006 NM_003775 ENSG00000125910 S1PR4 EDG6|LPC1|S1P4|SLP4 sphingosine-1-phosphate receptor 4 protein-coding chr12-2402 chr12 44861588 44861798 + 10.1 0.000 intron (NM_006159, intron 3 of 20) L1M1|LINE|L1 13968 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr20-1818 chr20 63248984 63249194 + 10.1 0.000 intron (NM_001363747, intron 2 of 6) intron (NM_001363747, intron 2 of 6) 4406 NM_001363718 128414 Hs.46627 NM_152864 ENSG00000101198 NKAIN4 C20orf58|FAM77A|bA261N11.2 sodium/potassium transporting ATPase interacting 4 protein-coding chr18-3017 chr18 25988051 25988261 + 10.1 0.000 Intergenic MIRb|SINE|MIR 102457 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr16-2965 chr16 11347000 11347210 + 10.1 0.000 intron (NM_152308, intron 1 of 1) intron (NM_152308, intron 1 of 1) 1646 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr17-3261 chr17 32264606 32264816 + 10.1 0.000 Intergenic Intergenic -1121 NM_138328 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr1-5457 chr1 55463987 55464197 + 10.1 0.000 Intergenic Intergenic 238451 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr15-824 chr15 95888251 95888461 + 10.1 0.000 Intergenic Intergenic 239485 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr1-6896 chr1 119835024 119835234 + 10.1 0.000 intron (NM_001047980, intron 7 of 7) intron (NM_001047980, intron 7 of 7) 9751 NM_001047980 343505 NM_001047980 NBPF7 - NBPF member 7 protein-coding chr6-4781 chr6 75348987 75349197 + 10.1 0.000 intron (NM_001300866, intron 4 of 6) MIR3|SINE|MIR -34094 NR_125859 101928540 Hs.526972 NR_125859 LOC101928540 - uncharacterized LOC101928540 ncRNA chr9-5440 chr9 97494818 97495028 + 10.1 0.000 intron (NM_001302884, intron 15 of 15) AluJb|SINE|Alu -6257 NM_001166116 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr2-7040 chr2 157696048 157696258 + 10.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -67289 NM_145259 130399 Hs.562901 NM_145259 ENSG00000123612 ACVR1C ACVRLK7|ALK7 activin A receptor type 1C protein-coding chr5-2777 chr5 172567466 172567676 + 10.1 0.000 Intergenic LTR33|LTR|ERVL -8557 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr18-2118 chr18 52589437 52589647 + 10.1 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 249345 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr11-6846 chr11 96794242 96794452 + 10.1 0.000 Intergenic Intergenic 285922 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr1-12528 chr1 25209768 25209978 + 10.1 0.000 Intergenic L1MB7|LINE|L1 22629 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr16-3924 chr16 84542138 84542348 + 10.1 0.000 Intergenic MER102b|DNA|hAT-Charlie -37584 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr6-2627 chr6 151161006 151161216 + 10.1 0.000 Intergenic Intergenic 58436 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr7-2218 chr7 118183914 118184124 + 10.1 0.000 promoter-TSS (NM_016200) promoter-TSS (NM_016200) -145 NM_016200 51691 Hs.655046 NM_016200 ENSG00000128534 LSM8 NAA38 LSM8 homolog, U6 small nuclear RNA associated protein-coding chr15-2266 chr15 49273917 49274127 + 10.1 0.000 intron (NM_001289030, intron 6 of 10) intron (NM_001289030, intron 6 of 10) 103775 NM_002044 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr12-4633 chr12 43674185 43674395 + 10.1 0.000 Intergenic L1M4|LINE|L1 84500 NM_001098614 83448 Hs.23554 NM_031292 ENSG00000129317 PUS7L - pseudouridine synthase 7 like protein-coding chr17-2977 chr17 66306545 66306755 + 10.1 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 4037 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr2-13600 chr2 158518548 158518758 + 10.1 0.000 intron (NM_001005476, intron 1 of 20) HAL1ME|LINE|L1 61701 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr2-1474 chr2 85133318 85133528 + 10.1 0.000 promoter-TSS (NM_031283) promoter-TSS (NM_031283) 31 NM_031283 83439 Hs.516297 NM_031283 ENSG00000152284 TCF7L1 TCF-3|TCF3 transcription factor 7 like 1 protein-coding chr12-4787 chr12 53748280 53748490 + 10.1 0.000 Intergenic Intergenic 3450 NR_104333 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr7-4892 chr7 122219377 122219587 + 10.1 0.000 Intergenic Intergenic -75233 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr5-1912 chr5 171867995 171868205 + 10.1 0.000 intron (NM_012300, intron 12 of 12) intron (NM_012300, intron 12 of 12) 82228 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr1-7075 chr1 184691736 184691946 + 10.1 0.000 non-coding (NR_135118, exon 21 of 21) non-coding (NR_135118, exon 21 of 21) 63017 NR_135118 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr7-4084 chr7 25070201 25070411 + 10.1 0.000 Intergenic Intergenic 55055 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr15-2165 chr15 78455922 78456132 + 10.1 0.000 intron (NM_001354994, intron 2 of 21) MLT1F|LTR|ERVL-MaLR 17606 NM_001320942 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr13-2663 chr13 82689582 82689792 + 10.1 0.000 Intergenic Intergenic 1192706 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr4-4530 chr4 67918491 67918701 + 10.1 0.000 intron (NM_001114387, intron 8 of 9) MLT1K|LTR|ERVL-MaLR -34594 NM_004262 9407 Hs.132195 NM_004262 ENSG00000153802 TMPRSS11D HAT transmembrane serine protease 11D protein-coding chr1-12613 chr1 37588448 37588658 + 10.1 0.000 intron (NM_013285, intron 4 of 15) intron (NM_013285, intron 4 of 15) 7384 NM_013285 29889 Hs.75528 NM_013285 ENSG00000134697 GNL2 HUMAUANTIG|NGP1|Ngp-1|Nog2|Nug2 G protein nucleolar 2 protein-coding chr1-10178 chr1 110467659 110467869 + 10.1 0.000 Intergenic MER102b|DNA|hAT-Charlie -13002 NR_003599 643160 Hs.532720 NR_003599 ENSG00000240194 CYMP - chymosin pseudogene pseudo chr2-7702 chr2 32136268 32136478 + 10.1 0.000 intron (NM_001363875, intron 8 of 15) intron (NM_001363875, intron 8 of 15) -29468 NM_001193514 55676 Hs.23248 NM_017964 ENSG00000152683 SLC30A6 MST103|MSTP103|ZNT6 solute carrier family 30 member 6 protein-coding chr11-5241 chr11 26595633 26595843 + 10.1 0.000 intron (NM_031418, intron 14 of 26) HERV17-int|LTR|ERV1 -23475 NM_001135092 143662 Hs.407152 NM_145650 ENSG00000169550 MUC15 MUC-15|PAS3|PASIII mucin 15, cell surface associated protein-coding chr9-2603 chr9 6132104 6132314 + 10.1 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -82940 NM_001314047 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr1-7265 chr1 231729653 231729863 + 10.1 0.000 intron (NM_001164544, intron 3 of 8) intron (NM_001164544, intron 3 of 8) 88759 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 ncRNA chr16-4737 chr16 84441564 84441774 + 10.1 0.000 intron (NM_001291454, intron 11 of 23) AluSx|SINE|Alu 25692 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr15-2502 chr15 33105001 33105211 + 10.1 0.000 intron (NM_001277313, intron 4 of 20) intron (NM_001277313, intron 4 of 20) -36932 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr1-4771 chr1 11208775 11208985 + 10.1 0.000 intron (NM_004958, intron 25 of 57) MER5A1|DNA|hAT-Charlie 19525 NM_021146 10218 Hs.146559 NM_021146 ENSG00000171819 ANGPTL7 AngX|CDT6|dJ647M16.1 angiopoietin like 7 protein-coding chr2-4316 chr2 237182512 237182722 + 10.1 0.000 Intergenic Intergenic 96728 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr11-4480 chr11 108483076 108483286 + 10.1 0.000 intron (NM_001363503, intron 3 of 6) intron (NM_001363503, intron 3 of 6) 15203 NM_001363503 143888 Hs.83286 NM_153705 ENSG00000178202 POGLUT3 KDELC2 protein O-glucosyltransferase 3 protein-coding chr14-2252 chr14 105430769 105430979 + 10.1 0.000 intron (NM_001203258, intron 1 of 20) MER58B|DNA|hAT-Charlie 11047 NM_001203258 9112 Hs.525629 NM_004689 ENSG00000182979 MTA1 - metastasis associated 1 protein-coding chr17-4745 chr17 40659641 40659851 + 10.1 0.000 intron (NM_152349, intron 3 of 5) intron (NM_152349, intron 3 of 5) 5431 NM_152349 125113 Hs.6920 NM_152349 ENSG00000213424 KRT222 KA21|KRT222P keratin 222 protein-coding chr9-2928 chr9 134940804 134941014 + 10.1 0.000 Intergenic Intergenic -22997 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr6-1531 chr6 43278053 43278263 + 10.1 0.000 intron (NM_032538, intron 13 of 14) intron (NM_032538, intron 13 of 14) -20102 NM_006672 10864 Hs.485438 NM_006672 ENSG00000137204 SLC22A7 NLT|OAT2|hOAT11 solute carrier family 22 member 7 protein-coding chr5-5378 chr5 133804296 133804506 + 10.1 0.000 Intergenic Intergenic -109276 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr9-7897 chr9 88370439 88370649 + 10.1 0.000 Intergenic X6B_LINE|LINE|CR1 -17900 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr2-8944 chr2 187055370 187055580 + 10.1 0.000 Intergenic L1PA17|LINE|L1 -206305 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr11-9717 chr11 68107176 68107386 + 10.1 0.000 intron (NM_001277, intron 1 of 11) MER20|DNA|hAT-Charlie 14107 NM_001277 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr3-8889 chr3 11309589 11309799 + 10.1 0.000 intron (NM_001144912, intron 5 of 16) (AC)n|Simple_repeat|Simple_repeat 37297 NM_001349232 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr3-5882 chr3 37653675 37653885 + 10.1 0.000 exon (NM_002207, exon 17 of 28) exon (NM_002207, exon 17 of 28) 201639 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr3-6789 chr3 143736718 143736928 + 10.1 0.000 intron (NM_173653, intron 4 of 15) intron (NM_173653, intron 4 of 15) 111645 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr16-2634 chr16 17698739 17698949 + 10.1 0.000 Intergenic L1MD1|LINE|L1 -227884 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr7-5216 chr7 13453159 13453369 + 10.1 0.000 Intergenic MER74C|LTR|ERVL 533250 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr1-9726 chr1 53448580 53448790 + 10.1 0.000 Intergenic MER21C|LTR|ERVL -8665 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr2-6187 chr2 7361707 7361917 + 10.1 0.000 Intergenic MIRc|SINE|MIR -59449 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr15-1666 chr15 39918729 39918939 + 10.1 0.000 intron (NM_001271854, intron 1 of 3) intron (NM_001271854, intron 1 of 3) 2058 NM_007223 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr7-2813 chr7 93677160 93677370 + 10.1 0.000 Intergenic LTR33|LTR|ERVL -39663 NR_039796 100616206 NR_039796 ENSG00000265423 MIR4652 - microRNA 4652 ncRNA chr13-2298 chr13 31410282 31410492 + 10.1 0.000 Intergenic Intergenic 210412 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr1-10402 chr1 156835362 156835572 + 10.1 0.000 intron (NM_001007792, intron 1 of 16) L1ME4a|LINE|L1 -18619 NM_001161441 9047 Hs.103527 NM_003975 ENSG00000027869 SH2D2A F2771|SCAP|TSAD|VRAP SH2 domain containing 2A protein-coding chr4-3131 chr4 172369836 172370046 + 10.1 0.000 intron (NM_001034845, intron 5 of 12) LTR12C|LTR|ERV1 318976 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr1-8840 chr1 3189567 3189777 + 10.1 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 61697 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr9-5778 chr9 127942798 127943008 + 10.1 0.000 3' UTR (NM_203305, exon 8 of 8) 3' UTR (NM_203305, exon 8 of 8) -4419 NM_003863 8818 Hs.108973 NM_003863 ENSG00000136908 DPM2 CDG1U dolichyl-phosphate mannosyltransferase subunit 2, regulatory protein-coding chr5-6404 chr5 148829027 148829237 + 10.1 0.000 TTS (NM_000024) TTS (NM_000024) 2539 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr12-1643 chr12 3281906 3282116 + 10.1 0.000 intron (NM_001168320, intron 7 of 7) intron (NM_001168320, intron 7 of 7) 84111 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr20-2900 chr20 63483909 63484119 + 10.1 0.000 Intergenic Intergenic -11359 NM_172107 3785 Hs.161851 NM_004518 ENSG00000075043 KCNQ2 BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2 potassium voltage-gated channel subfamily Q member 2 protein-coding chr14-1386 chr14 48936471 48936681 + 10.1 0.000 Intergenic Intergenic 649804 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr7-1431 chr7 45082402 45082612 + 10.1 0.000 exon (NM_001146334, exon 2 of 8) exon (NM_001146334, exon 2 of 8) 6462 NM_001146334 23148 Hs.96633 NM_001146334 ENSG00000136274 NACAD - NAC alpha domain containing protein-coding chrX-2412 chrX 74637271 74637481 + 10.1 0.000 Intergenic L1PB1|LINE|L1 -22752 NM_183353 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr3-4516 chr3 106933816 106934026 + 10.1 0.000 Intergenic (AGAT)n|Simple_repeat|Simple_repeat 306717 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr5-4646 chr5 35656843 35657053 + 10.1 0.000 intron (NM_144722, intron 7 of 9) intron (NM_144722, intron 7 of 9) 39085 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr19-2758 chr19 41702336 41702546 + 10.1 0.000 Intergenic Intergenic -6185 NM_004363 1048 Hs.709196 NM_004363 ENSG00000105388 CEACAM5 CD66e|CEA carcinoembryonic antigen related cell adhesion molecule 5 protein-coding chr8-3992 chr8 53536253 53536463 + 10.1 0.000 Intergenic Intergenic -12393 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr10-1596 chr10 33155894 33156104 + 10.1 0.000 Intergenic Intergenic -39192 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr5-2920 chr5 135253895 135254105 + 10.1 0.000 intron (NR_161235, intron 3 of 5) intron (NR_161235, intron 3 of 5) -5823 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr14-1574 chr14 74863594 74863804 + 10.1 0.000 exon (NM_001080408, exon 1 of 3) exon (NM_001080408, exon 1 of 3) 135 NM_001243007 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding chr6-2928 chr6 23620853 23621063 + 10.1 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -505257 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr11-3335 chr11 117369838 117370048 + 10.1 0.000 intron (NM_001271933, intron 7 of 31) LTR16B1|LTR|ERVL 42089 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr5-7816 chr5 66540163 66540373 + 10.1 0.000 Intergenic Intergenic -28664 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr13-599 chr13 43786749 43786959 + 10.1 0.000 non-coding (NR_145132, exon 1 of 2) non-coding (NR_145132, exon 1 of 2) 118 NM_001347964 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr7-5067 chr7 2045127 2045337 + 10.1 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 43820 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr9-2944 chr9 136500243 136500453 + 10.1 0.000 intron (NM_017617, intron 31 of 33) intron (NM_017617, intron 31 of 33) -16589 NM_001276418 9919 Hs.522500 NM_014866 ENSG00000148396 SEC16A KIAA0310|SEC16L|p250 SEC16 homolog A, endoplasmic reticulum export factor protein-coding chr5-8953 chr5 159669602 159669812 + 10.1 0.000 Intergenic Intergenic 201677 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr3-9861 chr3 80257533 80257743 + 10.1 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -489640 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr3-7050 chr3 173750198 173750408 + 10.1 0.000 intron (NM_001365928, intron 3 of 6) intron (NM_001365928, intron 3 of 6) 165869 NM_001365934 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr17-4624 chr17 8018684 8018894 + 10.1 0.000 intron (NM_000180, intron 19 of 19) MER102a|DNA|hAT-Charlie 16119 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr6-5322 chr6 143923245 143923455 + 10.1 0.000 intron (NM_001013623, intron 6 of 7) L1MA4A|LINE|L1 38060 NM_001317157 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr9-5635 chr9 120610038 120610248 + 10.1 0.000 intron (NM_001080497, intron 4 of 5) intron (NM_001080497, intron 4 of 5) -29973 NM_001272039 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr6-7691 chr6 86402405 86402615 + 10.1 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -535018 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr9-4553 chr9 86203990 86204200 + 10.1 0.000 Intergenic Intergenic 51938 NM_001276368 389766 Hs.632073 NM_001010907 ENSG00000187753 C9orf153 bA507D14.1 chromosome 9 open reading frame 153 protein-coding chr16-2317 chr16 26884026 26884236 + 10.1 0.000 Intergenic L1MEc|LINE|L1 -182796 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr11-6848 chr11 97872137 97872347 + 10.1 0.000 Intergenic L1MA2|LINE|L1 -1148707 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr6-4117 chr6 156985685 156985895 + 10.1 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -50637 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr8-7104 chr8 118767947 118768157 + 10.1 0.000 Intergenic L2|LINE|L2 -146089 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr2-11456 chr2 228529313 228529523 + 10.1 0.000 intron (NR_151716, intron 1 of 3) intron (NR_151716, intron 1 of 3) 81977 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr18-859 chr18 31745349 31745559 + 10.1 0.000 Intergenic Intergenic 15426 NM_001034172 147407 Hs.567708 NM_001034172 ENSG00000141437 SLC25A52 MCART2 solute carrier family 25 member 52 protein-coding chr18-2316 chr18 80255866 80256076 + 10.1 0.000 Intergenic Intergenic -8457 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr2-10526 chr2 232390312 232390522 + 10.1 0.000 Intergenic AluJb|SINE|Alu -3373 NR_028501 347694 Hs.452575 NR_028501 ENSG00000244280 ECEL1P2 ECEL2 endothelin converting enzyme like 1 pseudogene 2 pseudo chr3-6963 chr3 164193522 164193732 + 10.1 0.000 Intergenic L1PA16|LINE|L1 -22071 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr16-4478 chr16 56702057 56702267 + 10.1 0.000 Intergenic Intergenic 19692 NM_005952 4501 Hs.374950 NM_005952 ENSG00000187193 MT1X MT-1l|MT1 metallothionein 1X protein-coding chr3-5291 chr3 123460453 123460663 + 10.1 0.000 Intergenic Intergenic -12013 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr9-3286 chr9 70272639 70272849 + 10.1 0.000 intron (NM_015110, intron 3 of 24) L2a|LINE|L2 13766 NM_015110 23137 Hs.534189 NM_015110 ENSG00000198887 SMC5 SMC5L1 structural maintenance of chromosomes 5 protein-coding chr3-4451 chr3 35392250 35392460 + 10.1 0.000 intron (NR_110817, intron 1 of 3) THE1C-int|LTR|ERVL-MaLR 1668 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr17-4841 chr17 60262478 60262688 + 10.1 0.000 intron (NM_032582, intron 9 of 33) intron (NM_032582, intron 9 of 33) -30938 NR_002999 677681 NR_002999 ENSG00000252577 SCARNA20 ACA66 small Cajal body-specific RNA 20 ncRNA chr2-4201 chr2 200787387 200787597 + 10.1 0.000 intron (NR_135012, intron 29 of 30) intron (NR_135012, intron 29 of 30) -24054 NM_014670 9689 Hs.355983 NM_014670 ENSG00000082153 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding chr2-9221 chr2 218025396 218025606 + 10.1 0.000 Intergenic AluSx|SINE|Alu -9433 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr10-3458 chr10 58023797 58024007 + 10.1 0.000 Intergenic Intergenic 243992 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr3-10883 chr3 170046030 170046240 + 10.1 0.000 intron (NM_014373, intron 2 of 3) intron (NM_014373, intron 2 of 3) 8140 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr2-9434 chr2 232958183 232958393 + 10.1 0.000 intron (NM_019850, intron 3 of 14) intron (NM_019850, intron 3 of 14) -30137 NM_001114090 25791 Hs.97316 NM_019850 ENSG00000066248 NGEF ARHGEF27|EPHEXIN neuronal guanine nucleotide exchange factor protein-coding chrX-1993 chrX 13029265 13029475 + 10.1 0.000 Intergenic Intergenic 15250 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chr2-3967 chr2 70091641 70091851 + 10.1 0.000 Intergenic L2b|LINE|L2 4269 NM_006196 5093 Hs.2853 NM_006196 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding chr1-16364 chr1 220508700 220508910 + 10.1 0.000 Intergenic Intergenic -19331 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr6-3570 chr6 63904832 63905042 + 10.1 0.000 intron (NM_001292009, intron 35 of 43) L1MB5|LINE|L1 98101 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr17-7284 chr17 3811325 3811535 + 10.1 0.000 3' UTR (NM_001114118, exon 13 of 13) 3' UTR (NM_001114118, exon 13 of 13) -10242 NM_002208 3682 Hs.513867 NM_002208 ENSG00000083457 ITGAE CD103|HUMINAE integrin subunit alpha E protein-coding chr9-1521 chr9 109507528 109507738 + 10.1 0.000 Intergenic Intergenic 3912 NR_037493 100500898 NR_037493 ENSG00000263861 MIR3927 - microRNA 3927 ncRNA chrX-2281 chrX 50751669 50751879 + 10.1 0.000 intron (NR_027121, intron 1 of 9) intron (NR_027121, intron 1 of 9) 62270 NM_020717 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding chr5-2970 chr5 173703421 173703631 + 10.1 0.000 intron (NR_146727, intron 2 of 2) intron (NR_146727, intron 2 of 2) 14067 NR_146727 105377736 Hs.582570 NR_146727 ENSG00000253428 LINC01942 - long intergenic non-protein coding RNA 1942 ncRNA chr6-2581 chr6 71039847 71040057 + 10.1 0.000 Intergenic MIR|SINE|MIR -82892 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr12-3903 chr12 123986723 123986933 + 10.1 0.000 intron (NM_001347902, intron 2 of 4) LTR88c|LTR|Gypsy? 13613 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr15-1617 chr15 85329865 85330075 + 10.1 0.000 Intergenic Intergenic -50626 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr9-5746 chr9 126766592 126766802 + 10.1 0.000 Intergenic L1MEf|LINE|L1 -38309 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr22-2501 chr22 22743539 22743749 + 10.1 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -79132 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr3-6147 chr3 57216202 57216412 + 10.1 0.000 Intergenic L1MC4|LINE|L1 -11422 NM_012096 26060 Hs.476415 NM_012096 ENSG00000157500 APPL1 APPL|DIP13alpha|MODY14 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 protein-coding chr5-7180 chr5 5783499 5783709 + 10.1 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 360927 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr3-3696 chr3 162315376 162315586 + 10.1 0.000 Intergenic L1M1|LINE|L1 818673 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr20-1149 chr20 48965551 48965761 + 10.1 0.000 intron (NM_006420, intron 7 of 38) intron (NM_006420, intron 7 of 38) 43945 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr2-4594 chr2 109049078 109049288 + 10.1 0.000 Intergenic Intergenic -59963 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr2-5520 chr2 150526777 150526987 + 10.1 0.000 Intergenic Intergenic -39187 NM_001254738 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr19-3224 chr19 58537049 58537259 + 10.1 0.000 intron (NM_001316980, intron 1 of 2) intron (NM_001316980, intron 1 of 2) 1757 NM_001316982 84878 Hs.515662 NM_032792 ENSG00000119574 ZBTB45 ZNF499 zinc finger and BTB domain containing 45 protein-coding chr19-2995 chr19 41990140 41990350 + 10.1 0.000 intron (NM_001256214, intron 1 of 22) intron (NM_001256214, intron 1 of 22) 3222 NM_001256213 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr10-3608 chr10 92997403 92997613 + 10.1 0.000 exon (NM_019053, exon 19 of 22) exon (NM_019053, exon 19 of 22) -63290 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr10-4576 chr10 107814861 107815071 + 10.1 0.000 Intergenic Intergenic 254327 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr2-7264 chr2 232899002 232899212 + 10.1 0.000 intron (NM_001114090, intron 3 of 12) intron (NM_001114090, intron 3 of 12) 23275 NR_144372 389084 Hs.657509 NM_206895 ENSG00000182600 SNORC ASCL830|C2orf82|UNQ830 secondary ossification center associated regulator of chondrocyte maturation protein-coding chr22-1119 chr22 38731922 38732132 + 10.1 0.000 3' UTR (NM_004286, exon 12 of 12) 3' UTR (NM_004286, exon 12 of 12) 23439 NM_001199580 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr7-5322 chr7 26512960 26513170 + 10.1 0.000 intron (NR_148500, intron 5 of 5) intron (NR_148500, intron 5 of 5) 25760 NR_022006 9808 Hs.69749 NM_014769 ENSG00000122548 KIAA0087 - KIAA0087 lncRNA ncRNA chr1-12117 chr1 163461685 163461895 + 10.1 0.000 Intergenic Intergenic -38599 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr1-7273 chr1 234533162 234533372 + 10.1 0.000 Intergenic Intergenic -1488 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr2-9044 chr2 199286644 199286854 + 10.1 0.000 intron (NM_001172509, intron 10 of 10) intron (NM_001172509, intron 10 of 10) 171190 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr3-2798 chr3 5750923 5751133 + 10.1 0.000 Intergenic Intergenic -500773 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr4-6190 chr4 47473443 47473653 + 10.1 0.000 Intergenic MER67C|LTR|ERV1 -9818 NM_001329668 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chrX-1268 chrX 107327605 107327815 + 10.1 0.000 Intergenic Intergenic 121078 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr6-7375 chr6 49114988 49115198 + 10.1 0.000 Intergenic Intergenic 348160 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr2-8895 chr2 178914346 178914556 + 10.1 0.000 intron (NM_001316745, intron 7 of 11) intron (NM_001316745, intron 7 of 11) -107028 NM_001256850 7273 Hs.134602 NM_003319 ENSG00000155657 TTN CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|LGMDR10|MYLK5|SALMY|TMD titin protein-coding chr5-3034 chr5 16539324 16539534 + 10.1 0.000 intron (NM_001034850, intron 3 of 8) intron (NM_001034850, intron 3 of 8) -30431 NM_019000 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr22-2109 chr22 30035407 30035617 + 10.1 0.000 intron (NR_110541, intron 3 of 4) intron (NR_110541, intron 3 of 4) 28463 NR_106876 102466742 NR_106876 ENSG00000275818 MIR6818 hsa-mir-6818 microRNA 6818 ncRNA chr7-4807 chr7 94808819 94809029 + 10.1 0.000 Intergenic L1PA10|LINE|L1 -98670 NM_001166160 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr16-1956 chr16 60587473 60587683 + 10.1 0.000 Intergenic Intergenic -227785 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr12-5006 chr12 80838565 80838775 + 10.1 0.000 intron (NM_004664, intron 4 of 5) UCON1|Unknown|Unknown -6041 NR_030348 693202 NR_030348 ENSG00000207763 MIR617 MIRN617|hsa-mir-617 microRNA 617 ncRNA chr19-6429 chr19 15506124 15506334 + 10.1 0.000 Intergenic MER20|DNA|hAT-Charlie -2296 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr11-5538 chr11 94090555 94090765 + 10.1 0.000 intron (NM_001098672, intron 12 of 19) intron (NM_001098672, intron 12 of 19) -38181 NM_015368 24145 Hs.591976 NM_015368 ENSG00000110218 PANX1 MRS1|PX1|UNQ2529 pannexin 1 protein-coding chr4-683 chr4 153222942 153223152 + 10.1 0.000 intron (NM_001302693, intron 1 of 2) CpG 18604 NM_001351057 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr2-7443 chr2 11607857 11608067 + 10.1 0.000 intron (NM_014668, intron 17 of 32) intron (NM_014668, intron 17 of 32) 62233 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr3-5788 chr3 25964769 25964979 + 10.1 0.000 Intergenic Intergenic -91179 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr15-1559 chr15 69468998 69469208 + 10.1 0.000 Intergenic Intergenic 16285 NM_001003 6176 Hs.356502 NM_001003 ENSG00000137818 RPLP1 LP1|P1|RPP1 ribosomal protein lateral stalk subunit P1 protein-coding chr1-8049 chr1 246450852 246451062 + 10.1 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) -33545 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-6063 chr1 92329592 92329802 + 10.1 0.000 intron (NM_024813, intron 8 of 12) L1ME3A|LINE|L1 30638 NM_024813 79871 Hs.444421 NM_024813 ENSG00000122484 RPAP2 C1orf82|Rtr1 RNA polymerase II associated protein 2 protein-coding chr2-6594 chr2 234787735 234787945 + 10.1 0.000 Intergenic Intergenic 105172 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr22-3374 chr22 30542444 30542654 + 10.1 0.000 5' UTR (NM_001353441, exon 1 of 12) 5' UTR (NM_001353441, exon 1 of 12) 105 NM_001353441 730005 Hs.505605 NM_001193336 ENSG00000214491 SEC14L6 - SEC14 like lipid binding 6 protein-coding chr3-5539 chr3 2200037 2200247 + 10.1 0.000 intron (NM_175607, intron 2 of 24) L2a|LINE|L2 -38687 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding KI270754.1-1 KI270754.1 39384 39587 + 10.1 0.000 NA NA NA NA chr6-4762 chr6 72610740 72610950 + 10.1 0.000 Intergenic Intergenic -10998 NM_001160130 56479 Hs.445324 NM_019842 ENSG00000185760 KCNQ5 Kv7.5|MRD46 potassium voltage-gated channel subfamily Q member 5 protein-coding chr3-3511 chr3 18369798 18370008 + 10.1 0.000 intron (NM_001131010, intron 9 of 10) intron (NM_001131010, intron 9 of 10) 55436 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr6-4162 chr6 770790 771000 + 10.1 0.000 Intergenic L2a|LINE|L2 -77754 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr5-1674 chr5 57663096 57663306 + 10.1 0.000 intron (NR_104668, intron 1 of 2) MIR|SINE|MIR 12541 NR_104668 101928505 Hs.119998 NR_104668 LOC101928505 - uncharacterized LOC101928505 ncRNA chr2-5940 chr2 29042505 29042715 + 10.1 0.000 intron (NM_001321538, intron 17 of 18) LTR18B|LTR|ERVL 31913 NM_001029883 388939 Hs.354243 NM_001029883 ENSG00000179270 PCARE C2orf71|RP54 photoreceptor cilium actin regulator protein-coding chr3-7090 chr3 179391582 179391792 + 10.1 0.000 intron (NM_033540, intron 17 of 17) MamRep137|DNA|TcMar-Tigger 43978 NM_033540 55669 Hs.478383 NM_017927 ENSG00000171109 MFN1 hfzo1|hfzo2 mitofusin 1 protein-coding chr20-953 chr20 35087767 35087977 + 10.1 0.000 intron (NM_199368, intron 1 of 18) intron (NM_199368, intron 1 of 18) 4935 NM_015638 26133 Hs.168073 NM_015638 ENSG00000100991 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel subfamily C member 4 associated protein protein-coding chr3-2825 chr3 14861837 14862047 + 10.1 0.000 intron (NM_152536, intron 1 of 19) L2|LINE|L2 42980 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr16-2351 chr16 53153458 53153668 + 10.1 0.000 intron (NM_001352127, intron 1 of 38) AluJo|SINE|Alu -2363 NM_001308319 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr9-5774 chr9 127780422 127780632 + 10.1 0.000 Intergenic Intergenic -1861 NM_170600 10044 Hs.306412 NM_005489 ENSG00000095370 SH2D3C CHAT|NSP3|PRO34088|SHEP1 SH2 domain containing 3C protein-coding chr1-3854 chr1 38088716 38088926 + 10.1 0.000 promoter-TSS (NR_037432) promoter-TSS (NR_037432) -410 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr4-7594 chr4 81052541 81052751 + 10.1 0.000 intron (NM_001201, intron 2 of 2) intron (NM_001201, intron 2 of 2) 21938 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr8-4248 chr8 91408637 91408847 + 10.1 0.000 Intergenic MLT1H-int|LTR|ERVL-MaLR 159423 NM_134266 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chr9-4129 chr9 135677933 135678143 + 10.1 0.000 Intergenic Kanga2_a|DNA|TcMar-Tc2 14716 NM_001001676 392399 Hs.532679 NM_001001676 ENSG00000148386 LCN9 HEL129 lipocalin 9 protein-coding chr1-6586 chr1 36094758 36094968 + 10.1 0.000 TTS (NM_001294347) TTS (NM_001294347) 5971 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr4-3156 chr4 183657660 183657870 + 10.1 0.000 intron (NM_152682, intron 1 of 6) L3|LINE|CR1 1420 NM_001307922 201965 Hs.133337 NM_152682 ENSG00000182552 RWDD4 FAM28A|RWDD4A RWD domain containing 4 protein-coding chr1-5992 chr1 45051794 45052004 + 10.1 0.000 intron (NM_020883, intron 4 of 13) MIRb|SINE|MIR 39645 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr20-1171 chr20 64001327 64001537 + 10.1 0.000 intron (NM_012469, intron 9 of 20) MIR|SINE|MIR 20300 NM_012469 24148 Hs.31334 NM_012469 ENSG00000101161 PRPF6 ANT-1|ANT1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|hPrp6 pre-mRNA processing factor 6 protein-coding chr5-6100 chr5 17122163 17122373 + 10.1 0.000 Intergenic LTR16A1|LTR|ERVL 33724 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr9-4708 chr9 126652287 126652497 + 10.1 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 37949 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr1-15982 chr1 195544189 195544399 + 10.1 0.000 Intergenic L2c|LINE|L2 544421 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr6-3160 chr6 116251061 116251271 + 10.1 0.000 3' UTR (NM_021648, exon 1 of 1) 3' UTR (NM_021648, exon 1 of 1) 2909 NM_021648 23270 Hs.284141 NM_021648 ENSG00000187189 TSPYL4 dJ486I3.2 TSPY like 4 protein-coding chr14-4256 chr14 103849459 103849669 + 10.1 0.000 intron (NR_038436, intron 1 of 2) intron (NR_038436, intron 1 of 2) 1843 NR_038436 145216 Hs.578091 NR_038436 ENSG00000258735 LINC00637 - long intergenic non-protein coding RNA 637 ncRNA chr22-931 chr22 38428446 38428656 + 10.1 0.000 intron (NM_152868, intron 1 of 1) intron (NM_152868, intron 1 of 1) 15477 NM_004981 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr15-2941 chr15 48222941 48223151 + 10.1 0.000 intron (NM_001184832, intron 4 of 26) intron (NM_001184832, intron 4 of 26) 16744 NM_001184832 6557 Hs.123116 NM_000338 ENSG00000074803 SLC12A1 BSC1|NKCC2 solute carrier family 12 member 1 protein-coding chr5-3693 chr5 1165601 1165811 + 10.1 0.000 Intergenic Intergenic 12899 NR_109911 101928857 Hs.593732 NR_109911 ENSG00000249201 CTD-3080P12.3 - uncharacterized LOC101928857 ncRNA chr15-2404 chr15 64426841 64427051 + 10.1 0.000 intron (NM_001321924, intron 11 of 12) AluSc8|SINE|Alu 39110 NM_001321924 9325 Hs.500340 NM_016213 ENSG00000103671 TRIP4 ASC-1|ASC1|HsT17391|MDCDC|SMABF1|ZC2HC5 thyroid hormone receptor interactor 4 protein-coding chr14-2356 chr14 23584499 23584709 + 10.1 0.000 Intergenic LTR12C|LTR|ERV1 -5814 NM_032452 84502 Hs.597841 NM_032452 ENSG00000092051 JPH4 JP4|JPHL1 junctophilin 4 protein-coding chrX-2159 chrX 36693044 36693254 + 10.1 0.000 Intergenic L1MA1|LINE|L1 -252857 NR_110412 101928627 Hs.590831 NR_110412 ENSG00000226484 LOC101928627 - uncharacterized LOC101928627 ncRNA chr2-11843 chr2 19891617 19891827 + 10.1 0.000 Intergenic AluSg|SINE|Alu 10261 NM_001008237 130502 Hs.591547 NM_001008237 ENSG00000183891 TTC32 - tetratricopeptide repeat domain 32 protein-coding chr14-3018 chr14 54736817 54737027 + 10.1 0.000 intron (NM_001161576, intron 2 of 10) intron (NM_001161576, intron 2 of 10) -17911 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr11-4226 chr11 64220165 64220375 + 10.1 0.000 exon (NM_031471, exon 11 of 15) exon (NM_031471, exon 11 of 15) 5599 NM_001160393 83707 Hs.326586 NM_031472 ENSG00000149743 TRPT1 - tRNA phosphotransferase 1 protein-coding chr5-2220 chr5 178285831 178286041 + 10.1 0.000 intron (NM_173465, intron 5 of 28) intron (NM_173465, intron 5 of 28) -53114 NM_001278346 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr7-3360 chr7 99252518 99252728 + 10.1 0.000 Intergenic Intergenic -20678 NR_002147 84176 Hs.621401 NR_002147 MYH16 MHC20|MYH16P|MYH5 myosin heavy chain 16 pseudogene pseudo chr6-7704 chr6 87365162 87365372 + 10.1 0.000 exon (NM_001010868, exon 5 of 5) exon (NM_001010868, exon 5 of 5) 20454 NM_001010868 206412 Hs.646309 NM_001010868 ENSG00000203872 C6orf163 - chromosome 6 open reading frame 163 protein-coding chr11-8426 chr11 106998285 106998495 + 10.1 0.000 intron (NM_001256424, intron 1 of 8) intron (NM_001256424, intron 1 of 8) 20086 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chrX-4133 chrX 27606405 27606615 + 10.1 0.000 intron (NM_001353450, intron 1 of 4) AluSx1|SINE|Alu 16166 NR_148432 347442 Hs.720885 NM_001136533 ENSG00000189186 DCAF8L2 WDR42C DDB1 and CUL4 associated factor 8 like 2 protein-coding chr2-5441 chr2 121005538 121005748 + 10.1 0.000 Intergenic Intergenic 213362 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr17-3813 chr17 41742036 41742246 + 10.1 0.000 Intergenic Intergenic -7495 NM_177977 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding chrX-2158 chrX 36526538 36526748 + 10.1 0.000 Intergenic Intergenic -86351 NR_110412 101928627 Hs.590831 NR_110412 ENSG00000226484 LOC101928627 - uncharacterized LOC101928627 ncRNA chr3-2505 chr3 197016425 197016635 + 10.1 0.000 intron (NM_005929, intron 7 of 15) intron (NM_005929, intron 7 of 15) 13287 NM_005929 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chr2-4023 chr2 102245440 102245650 + 10.1 0.000 Intergenic Intergenic 58231 NM_001351446 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding chr3-4714 chr3 58035551 58035761 + 10.1 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 27234 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr12-8006 chr12 112340805 112341015 + 10.1 0.000 intron (NM_001109662, intron 1 of 75) intron (NM_001109662, intron 1 of 75) 41521 NM_001109662 283450 Hs.530943 NM_173813 ENSG00000173064 HECTD4 C12ord51|C12orf51|HEEL|POTAGE HECT domain E3 ubiquitin protein ligase 4 protein-coding chr7-6205 chr7 130755179 130755389 + 10.1 0.000 Intergenic LTR85b|LTR|Gypsy? -21251 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr6-8169 chr6 132389448 132389658 + 10.1 0.000 intron (NM_015529, intron 1 of 11) MER5B|DNA|hAT-Charlie 11922 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr10-2627 chr10 85935813 85936023 + 10.1 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 328870 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr5-1262 chr5 78648294 78648504 + 10.1 0.000 intron (NM_005779, intron 1 of 4) CpG 373 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr13-534 chr13 41465287 41465497 + 10.1 0.000 intron (NM_014059, intron 2 of 4) intron (NM_014059, intron 2 of 4) 7842 NM_014059 28984 Hs.507866 NM_014059 ENSG00000102760 RGCC C13orf15|RGC-32|RGC32|bA157L14.2 regulator of cell cycle protein-coding chr1-12846 chr1 95539451 95539661 + 10.1 0.000 Intergenic Intergenic 29440 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA chr5-3352 chr5 136974917 136975127 + 10.1 0.000 TTS (NM_004598) TTS (NM_004598) -153175 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr9-4644 chr9 114270817 114271027 + 10.1 0.000 intron (NM_032888, intron 36 of 60) intron (NM_032888, intron 36 of 60) -52101 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr9-1377 chr9 70601273 70601483 + 10.1 0.000 intron (NM_001366143, intron 19 of 25) intron (NM_001366143, intron 19 of 25) -186721 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr4-8527 chr4 163326209 163326419 + 10.1 0.000 exon (NM_000909, exon 2 of 3) exon (NM_000909, exon 2 of 3) 6282 NM_000909 4886 Hs.519057 NM_000909 ENSG00000164128 NPY1R NPY1-R|NPYR neuropeptide Y receptor Y1 protein-coding chr9-8227 chr9 109667237 109667447 + 10.1 0.000 intron (NM_001037293, intron 1 of 6) L4_A_Mam|LINE|RTE-X 26554 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr16-3169 chr16 81723172 81723382 + 10.1 0.000 Intergenic Intergenic -56014 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr3-7336 chr3 45269845 45270055 + 10.1 0.000 Intergenic Intergenic -43663 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr6-3503 chr6 23842790 23843000 + 10.1 0.000 Intergenic Intergenic -283320 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr3-5394 chr3 156936764 156936974 + 10.1 0.000 intron (NM_001004316, intron 5 of 12) L1MD2|LINE|L1 110516 NM_001193283 389170 Hs.478048 NM_001004316 ENSG00000197980 LEKR1 - leucine, glutamate and lysine rich 1 protein-coding chr7-8907 chr7 93832885 93833095 + 10.1 0.000 Intergenic Intergenic 57763 NM_001271004 7980 Hs.438231 NM_006528 ENSG00000105825 TFPI2 PP5|REF1|TFPI-2 tissue factor pathway inhibitor 2 protein-coding chr11-4425 chr11 93020777 93020987 + 10.1 0.000 Intergenic Intergenic 51259 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr2-2769 chr2 230128877 230129087 + 10.1 0.000 Intergenic Intergenic -60058 NM_152527 151473 Hs.504317 NM_152527 ENSG00000163053 SLC16A14 MCT14 solute carrier family 16 member 14 protein-coding chr8-3338 chr8 38514672 38514882 + 10.1 0.000 intron (NM_001369354, intron 1 of 1) AluSx1|SINE|Alu 13885 NM_207412 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr6-4091 chr6 146858104 146858314 + 10.1 0.000 intron (NR_034115, intron 8 of 10) intron (NR_034115, intron 8 of 10) -54385 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr17-7489 chr17 16243866 16244076 + 10.1 0.000 intron (NM_004278, intron 2 of 6) LTR8|LTR|ERV1 26761 NM_004278 9487 Hs.499793 NM_004278 ENSG00000108474 PIGL CHIME phosphatidylinositol glycan anchor biosynthesis class L protein-coding chr4-3245 chr4 79422775 79422985 + 10.1 0.000 Intergenic L2a|LINE|L2 -14652 NM_033214 2712 Hs.98008 NM_033214 ENSG00000196475 GK2 GKP2|GKTA glycerol kinase 2 protein-coding chr10-5298 chr10 69893989 69894199 + 10.1 0.000 intron (NM_080801, intron 9 of 38) intron (NM_080801, intron 9 of 38) 92188 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr21-1701 chr21 30541558 30541768 + 10.1 0.000 exon (NM_181612, exon 1 of 1) exon (NM_181612, exon 1 of 1) 201 NM_181612 337973 Hs.553695 NM_181612 ENSG00000186925 KRTAP19-6 KAP19.6 keratin associated protein 19-6 protein-coding chr17-3443 chr17 29103455 29103665 + 10.1 0.000 intron (NM_001346767, intron 21 of 39) intron (NM_001346767, intron 21 of 39) -27951 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr8-4339 chr8 100318739 100318949 + 10.1 0.000 intron (NM_001280539, intron 1 of 10) intron (NM_001280539, intron 1 of 10) -8891 NM_183419 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr7-5871 chr7 91940203 91940413 + 10.1 0.000 promoter-TSS (NM_005751) promoter-TSS (NM_005751) -554 NM_147185 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr6-2993 chr6 42720768 42720978 + 10.1 0.000 intron (NM_000322, intron 1 of 2) intron (NM_000322, intron 1 of 2) 1724 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr10-4790 chr10 6409875 6410085 + 10.1 0.000 intron (NM_001323267, intron 17 of 17) intron (NM_001323267, intron 17 of 17) 59664 NR_148966 399716 Hs.737229 NR_148966 LINC02656 - long intergenic non-protein coding RNA 2656 ncRNA chr5-1809 chr5 74040100 74040310 + 10.1 0.000 Intergenic LTR16A|LTR|ERVL 226659 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr22-2497 chr22 22228754 22228964 + 10.1 0.000 Intergenic Intergenic -15927 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr4-6920 chr4 16018581 16018791 + 10.1 0.000 intron (NM_001371408, intron 7 of 24) intron (NM_001371408, intron 7 of 24) -55511 NM_031950 83888 Hs.98785 NM_031950 ENSG00000137441 FGFBP2 HBP17RP|KSP37 fibroblast growth factor binding protein 2 protein-coding chr6-7343 chr6 46453913 46454123 + 10.1 0.000 intron (NM_001251973, intron 2 of 4) intron (NM_001251973, intron 2 of 4) 37305 NM_001251974 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr10-7777 chr10 35030488 35030698 + 10.1 0.000 intron (NM_003591, intron 14 of 20) AluJb|SINE|Alu 43690 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr6-3012 chr6 46059569 46059779 + 10.1 0.000 intron (NM_001370649, intron 1 of 5) MIRb|SINE|MIR 20674 NM_001114086 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr3-2277 chr3 66413094 66413304 + 10.1 0.000 intron (NM_015541, intron 5 of 18) intron (NM_015541, intron 5 of 18) 87222 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr2-9571 chr2 240749284 240749494 + 10.1 0.000 intron (NM_004321, intron 26 of 46) intron (NM_004321, intron 26 of 46) 57523 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr3-7280 chr3 197844166 197844376 + 10.1 0.000 intron (NM_001365717, intron 10 of 19) L2a|LINE|L2 53017 NM_001365715 84859 Hs.518414 NM_032773 ENSG00000186001 LRCH3 - leucine rich repeats and calponin homology domain containing 3 protein-coding chr1-9663 chr1 48136327 48136537 + 10.1 0.000 intron (NR_026749, intron 7 of 9) L1PA7|LINE|L1 45996 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo chr11-8292 chr11 72669561 72669771 + 10.1 0.000 promoter-TSS (NM_001146209) promoter-TSS (NM_001146209) -602 NM_001146209 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr14-2314 chr14 83923836 83924046 + 10.1 0.000 Intergenic L1MA4A|LINE|L1 1281309 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr17-2586 chr17 76021645 76021855 + 10.1 0.000 exon (NM_001320747, exon 8 of 22) exon (NM_001320747, exon 8 of 22) 5556 NM_001320747 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr3-6152 chr3 57471208 57471418 + 10.1 0.000 intron (NM_001366028, intron 15 of 73) (TATA)n|Simple_repeat|Simple_repeat 73031 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr2-7786 chr2 42494063 42494273 + 10.1 0.000 promoter-TSS (NM_001282755) promoter-TSS (NM_001282755) -186 NM_172344 170850 Hs.352633 NM_133329 ENSG00000171126 KCNG3 KV10.1|KV6.3 potassium voltage-gated channel modifier subfamily G member 3 protein-coding chr22-2691 chr22 37379139 37379349 + 10.1 0.000 intron (NM_052906, intron 2 of 2) intron (NM_052906, intron 2 of 2) -24405 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr21-339 chr21 46079415 46079625 + 10.1 0.000 Intergenic Intergenic -18592 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr14-2874 chr14 33608814 33609024 + 10.1 0.000 intron (NM_001165893, intron 4 of 10) intron (NM_001165893, intron 4 of 10) -100018 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr9-5123 chr9 36091470 36091680 + 10.1 0.000 intron (NM_021111, intron 10 of 20) intron (NM_021111, intron 10 of 20) -44961 NR_104641 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr1-2744 chr1 31239656 31239866 + 10.1 0.000 5' UTR (NM_024522, exon 1 of 7) 5' UTR (NM_024522, exon 1 of 7) 126 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr10-1189 chr10 90857874 90858084 + 10.1 0.000 promoter-TSS (NM_019859) promoter-TSS (NM_019859) 60 NM_019860 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr9-4428 chr9 13735188 13735398 + 10.1 0.000 Intergenic Intergenic -192678 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr11-8747 chr11 8560215 8560425 + 10.1 0.000 intron (NM_030906, intron 1 of 13) L1MC4a|LINE|L1 33656 NM_001289061 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr11-2132 chr11 14644120 14644330 + 10.1 0.000 promoter-TSS (NM_148976) promoter-TSS (NM_148976) 421 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr14-5041 chr14 80275462 80275672 + 10.1 0.000 intron (NR_038355, intron 2 of 8) intron (NR_038355, intron 2 of 8) -44510 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chrX-4925 chrX 110013703 110013913 + 10.1 0.000 intron (NM_001353850, intron 2 of 7) MIR|SINE|MIR 10694 NM_001353850 84187 Hs.496572 NM_017698 ENSG00000157600 TMEM164 bB360B22.3 transmembrane protein 164 protein-coding chr18-1765 chr18 9814401 9814611 + 10.1 0.000 intron (NM_006868, intron 4 of 6) intron (NM_006868, intron 4 of 6) -71467 NM_032243 84203 Hs.98712 NM_032243 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 protein-coding chr3-7465 chr3 134841342 134841552 + 10.1 0.000 intron (NM_004441, intron 1 of 15) intron (NM_004441, intron 1 of 15) 46187 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr8-3158 chr8 87855638 87855848 + 10.1 0.000 Intergenic Intergenic 18272 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr3-6165 chr3 58201502 58201712 + 10.1 0.000 intron (NM_004944, intron 4 of 7) LTR10E|LTR|ERV1 9365 NM_004944 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding chr6-4495 chr6 36956227 36956437 + 10.1 0.000 intron (NM_001199159, intron 2 of 7) MIR3|SINE|MIR 1594 NM_153370 221476 Hs.25391 NM_153370 ENSG00000164530 PI16 CD364|CRISP9|MSMBBP|PSPBP peptidase inhibitor 16 protein-coding chr4-3324 chr4 809004 809214 + 10.1 0.000 intron (NM_006651, intron 2 of 3) intron (NM_006651, intron 2 of 3) 17020 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr9-3357 chr9 114566242 114566452 + 10.1 0.000 Intergenic MER65-int|LTR|ERV1 -21422 NM_004888 9550 Hs.388654 NM_004888 ENSG00000136888 ATP6V1G1 ATP6G|ATP6G1|ATP6GL|ATP6J|Vma10 ATPase H+ transporting V1 subunit G1 protein-coding chr6-5013 chr6 109812237 109812447 + 10.1 0.000 intron (NM_014845, intron 22 of 22) L2a|LINE|L2 121121 NM_014845 9896 Hs.529959 NM_014845 ENSG00000112367 FIG4 ALS11|BTOP|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding chr7-3334 chr7 74094859 74095069 + 10.1 0.000 intron (NM_001204426, intron 1 of 14) intron (NM_001204426, intron 1 of 14) 1747 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr16-2668 chr16 67355765 67355975 + 10.1 0.000 intron (NM_018296, intron 5 of 13) intron (NM_018296, intron 5 of 13) 8515 NM_001161575 55282 Hs.125139 NM_018296 ENSG00000159708 LRRC36 RORBP70|XLHSRF2 leucine rich repeat containing 36 protein-coding chr12-4840 chr12 57592756 57592966 + 10.1 0.000 intron (NM_024779, intron 1 of 9) intron (NM_024779, intron 1 of 9) 1669 NM_001146258 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr11-5993 chr11 20473793 20474003 + 10.1 0.000 intron (NM_005788, intron 13 of 15) L1PA11|LINE|L1 86182 NM_005788 10196 Hs.152337 NM_005788 ENSG00000185238 PRMT3 HRMT1L3 protein arginine methyltransferase 3 protein-coding chr10-4129 chr10 75744658 75744868 + 10.1 0.000 TTS (NR_132791) TTS (NR_132791) 32308 NR_132791 105378367 Hs.464836 NR_132791 LOC105378367 - uncharacterized LOC105378367 ncRNA chr2-13690 chr2 164914116 164914326 + 10.1 0.000 intron (NM_001199148, intron 8 of 10) MIRc|SINE|MIR 41304 NM_001351537 151258 Hs.658702 NM_173512 ENSG00000169507 SLC38A11 AVT2 solute carrier family 38 member 11 protein-coding chr6-3203 chr6 133039989 133040199 + 10.1 0.000 Intergenic Intergenic -47986 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr11-4333 chr11 72100771 72100981 + 10.1 0.000 intron (NM_017907, intron 1 of 4) intron (NM_017907, intron 1 of 4) 2421 NM_017907 55004 Hs.731528 NM_017907 ENSG00000149357 LAMTOR1 C11orf59|PDRO|Ragulator1|p18|p27RF-Rho late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 protein-coding chr2-13296 chr2 129459051 129459261 + 10.1 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -185265 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr17-5706 chr17 55608117 55608327 + 10.1 0.000 Intergenic MIR|SINE|MIR 114642 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr17-4884 chr17 68100119 68100329 + 10.1 0.000 Intergenic LTR12C|LTR|ERV1 -1331 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chrX-4962 chrX 113394617 113394827 + 10.1 0.000 intron (NR_110399, intron 3 of 3) intron (NR_110399, intron 3 of 3) 351995 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr11-7569 chr11 28584965 28585175 + 10.1 0.000 Intergenic L2a|LINE|L2 -107522 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr11-4844 chr11 17760880 17761090 + 10.1 0.000 intron (NM_001112741, intron 1 of 3) intron (NM_001112741, intron 1 of 3) 25037 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr6-3968 chr6 106825279 106825489 + 10.1 0.000 Intergenic Intergenic -37843 NR_147986 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr6-3636 chr6 131269436 131269646 + 10.1 0.000 intron (NM_138633, intron 2 of 2) intron (NM_138633, intron 2 of 2) 19137 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr8-2026 chr8 103189787 103189997 + 10.1 0.000 intron (NM_001024372, intron 1 of 1) L2b|LINE|L2 -17752 NR_109954 100499183 Hs.654812 NR_034092 ENSG00000247081 BAALC-AS1 FZD6-DT|lncFZD6 BAALC antisense RNA 1 ncRNA chr1-7015 chr1 170218454 170218664 + 10.1 0.000 intron (NR_146891, intron 1 of 4) intron (NR_146891, intron 1 of 4) 44180 NR_146891 105371609 Hs.508115 NR_146891 LINC01681 - long intergenic non-protein coding RNA 1681 ncRNA chr10-7877 chr10 48837795 48838005 + 10.1 0.000 intron (NM_020945, intron 39 of 61) intron (NM_020945, intron 39 of 61) 76335 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr6-2974 chr6 38755282 38755492 + 10.1 0.000 intron (NM_001371, intron 8 of 91) intron (NM_001371, intron 8 of 91) 40076 NM_001371 1769 Hs.520106 NM_001371 ENSG00000124721 DNAH8 ATPase|hdhc9 dynein axonemal heavy chain 8 protein-coding chr16-3086 chr16 66476538 66476748 + 10.1 0.000 promoter-TSS (NR_109960) promoter-TSS (NR_109960) -241 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr16-4405 chr16 50625916 50626126 + 10.1 0.000 intron (NM_033119, intron 6 of 9) intron (NM_033119, intron 6 of 9) -42834 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr2-7600 chr2 25951240 25951450 + 10.1 0.000 intron (NM_002254, intron 5 of 7) L2b|LINE|L2 31152 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C - kinesin family member 3C protein-coding chr11-4319 chr11 69603437 69603647 + 10.1 0.000 Intergenic Intergenic -37563 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr8-5479 chr8 48543459 48543669 + 10.1 0.000 Intergenic Intergenic -8003 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr3-7233 chr3 194816467 194816677 + 10.1 0.000 Intergenic MIRb|SINE|MIR -47863 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr9-5481 chr9 99980344 99980554 + 10.1 0.000 3' UTR (NM_015051, exon 12 of 12) 3' UTR (NM_015051, exon 12 of 12) 73795 NM_017919 55014 Hs.704031 NM_017919 ENSG00000136874 STX17 - syntaxin 17 protein-coding chr19-4548 chr19 10371715 10371925 + 10.1 0.000 intron (NM_003331, intron 3 of 24) L1ME3C|LINE|L1 8752 NM_003331 7297 Hs.75516 NM_003331 ENSG00000105397 TYK2 IMD35|JTK1 tyrosine kinase 2 protein-coding chr1-11070 chr1 226863567 226863777 + 10.1 0.000 Intergenic Intergenic -6900 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr7-5238 chr7 16814771 16814981 + 10.1 0.000 Intergenic L1MEd|LINE|L1 -9877 NM_006408 10551 Hs.530009 NM_006408 ENSG00000106541 AGR2 AG-2|AG2|GOB-4|HAG-2|HEL-S-116|HPC8|PDIA17|XAG-2 anterior gradient 2, protein disulphide isomerase family member protein-coding chr2-8755 chr2 162317917 162318127 + 10.1 0.000 promoter-TSS (NM_001330268) promoter-TSS (NM_001330268) 662 NM_022168 64135 Hs.163173 NM_022168 ENSG00000115267 IFIH1 AGS7|Hlcd|IDDM19|MDA-5|MDA5|RLR-2|SGMRT1 interferon induced with helicase C domain 1 protein-coding chr2-2538 chr2 200677902 200678112 + 10.1 0.000 Intergenic Intergenic -17716 NR_135012 107161151 Hs.148269 NR_135011 AOX3P-AOX2P AOX3/AOX3L1 AOX3P-AOX2P readthrough, transcribed pseudogene pseudo chr1-3964 chr1 150724267 150724477 + 10.1 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -3477 NM_032132 84072 Hs.298312 NM_032132 ENSG00000143452 HORMAD1 CT46|NOHMA HORMA domain containing 1 protein-coding chr4-4172 chr4 9836838 9837048 + 10.1 0.000 intron (NM_001001290, intron 11 of 12) intron (NM_001001290, intron 11 of 12) 55309 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr2-9798 chr2 124123345 124123555 + 10.1 0.000 intron (NM_130773, intron 1 of 23) L1PA5|LINE|L1 98163 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr3-9048 chr3 23870402 23870612 + 10.1 0.000 intron (NM_003341, intron 3 of 5) LTR16C|LTR|ERVL -46038 NM_001253379 6138 Hs.381219 NM_002948 ENSG00000174748 RPL15 DBA12|EC45|L15|RPL10|RPLY10|RPYL10 ribosomal protein L15 protein-coding chr14-2426 chr14 67748436 67748646 + 10.1 0.000 exon (NM_015346, exon 42 of 42) exon (NM_015346, exon 42 of 42) 46655 NM_152443 145226 Hs.415322 NM_152443 ENSG00000139988 RDH12 LCA13|RP53|SDR7C2 retinol dehydrogenase 12 protein-coding chr5-3019 chr5 9858063 9858273 + 10.1 0.000 TTS (NR_147004) TTS (NR_147004) 3791 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA chrX-3977 chrX 13680627 13680837 + 10.1 0.000 Intergenic Intergenic -8389 NM_001195328 9367 Hs.495704 NM_004251 ENSG00000123595 RAB9A RAB9 RAB9A, member RAS oncogene family protein-coding chr7-2939 chr7 143240433 143240643 + 10.1 0.000 intron (NM_001130026, intron 8 of 10) MIR|SINE|MIR 18501 NM_176882 259286 Hs.352241 NM_176882 ENSG00000221937 TAS2R40 GPR60|T2R40|T2R58 taste 2 receptor member 40 protein-coding chr13-1705 chr13 90793505 90793715 + 10.1 0.000 Intergenic Intergenic 132987 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr4-5880 chr4 128029131 128029341 + 10.1 0.000 intron (NM_001039717, intron 10 of 10) AluJo|SINE|Alu -32076 NM_178043 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr2-8879 chr2 176973370 176973580 + 10.1 0.000 Intergenic Intergenic 238936 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr2-6652 chr2 7592856 7593066 + 10.1 0.000 Intergenic Intergenic 171700 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr4-3388 chr4 28421846 28422056 + 10.1 0.000 Intergenic AluSx4|SINE|Alu -397631 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr9-2543 chr9 128216449 128216659 + 10.1 0.000 intron (NM_001288739, intron 1 of 21) intron (NM_001288739, intron 1 of 21) -12332 NM_001131015 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr3-10949 chr3 175996538 175996748 + 10.1 0.000 Intergenic L1PA10|LINE|L1 -220310 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr4-4379 chr4 40741302 40741512 + 10.1 0.000 Intergenic Intergenic -8548 NM_001330648 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr7-9190 chr7 115968529 115968739 + 10.1 0.000 promoter-TSS (NM_001244583) promoter-TSS (NM_001244583) -321 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr2-2018 chr2 95159194 95159404 + 10.1 0.000 5' UTR (NM_032788, exon 1 of 5) 5' UTR (NM_032788, exon 1 of 5) 286 NM_001318005 84874 Hs.355664 NM_032788 ENSG00000144026 ZNF514 - zinc finger protein 514 protein-coding chr9-2353 chr9 89766780 89766990 + 10.1 0.000 Intergenic L1MB7|LINE|L1 127102 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr2-9046 chr2 199973876 199974086 + 10.1 0.000 Intergenic L4_A_Mam|LINE|RTE-X -18490 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr7-6275 chr7 136199832 136200042 + 10.1 0.000 Intergenic L1MA4A|LINE|L1 -222578 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr1-7181 chr1 210123460 210123670 + 10.1 0.000 intron (NM_153262, intron 6 of 7) HAL1|LINE|L1 -109231 NM_001354173 56256 Hs.600545 NM_019605 ENSG00000082497 SERTAD4 DJ667H12.2 SERTA domain containing 4 protein-coding chr6-4481 chr6 36348276 36348486 + 10.1 0.000 Intergenic AluSc8|SINE|Alu -11493 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chr1-4934 chr1 46368720 46368930 + 10.1 0.000 Intergenic AluJr|SINE|Alu -25492 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr16-6210 chr16 27959587 27959797 + 10.1 0.000 intron (NM_001109763, intron 2 of 6) AluJo|SINE|Alu -71535 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr7-2864 chr7 113099421 113099631 + 10.1 0.000 Intergenic Intergenic -11748 NM_018970 54329 Hs.152009 NM_018970 ENSG00000164604 GPR85 SREB|SREB2 G protein-coupled receptor 85 protein-coding chr5-1904 chr5 159207913 159208123 + 10.1 0.000 promoter-TSS (NM_001199381) promoter-TSS (NM_001199381) 55 NM_001199381 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chr7-7550 chr7 114879785 114879995 + 10.1 0.000 Intergenic L1MA2|LINE|L1 -42264 NM_001166345 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chr1-9007 chr1 10912315 10912525 + 10.1 0.000 Intergenic MIRb|SINE|MIR 54267 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr2-5073 chr2 10028084 10028294 + 10.1 0.000 Intergenic MLT1E1|LTR|ERVL-MaLR 15212 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr1-6891 chr1 118973881 118974091 + 10.1 0.000 intron (NM_152380, intron 1 of 7) intron (NM_152380, intron 1 of 7) 14357 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr15-1578 chr15 74866240 74866450 + 10.1 0.000 intron (NM_001320778, intron 1 of 9) intron (NM_001320778, intron 1 of 9) 7020 NM_005697 10066 Hs.458917 NM_005697 ENSG00000140497 SCAMP2 - secretory carrier membrane protein 2 protein-coding chr5-3964 chr5 9337991 9338201 + 10.1 0.000 intron (NM_003966, intron 3 of 22) intron (NM_003966, intron 3 of 22) -173237 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr22-2475 chr22 20824262 20824472 + 10.1 0.000 exon (NM_001362863, exon 4 of 54) exon (NM_001362863, exon 4 of 54) 34444 NM_058004 5297 Hs.529438 NM_002650 ENSG00000241973 PI4KA PI4K-ALPHA|PIK4CA|PMGYCHA|pi4K230 phosphatidylinositol 4-kinase alpha protein-coding chr16-1179 chr16 88792139 88792349 + 10.1 0.000 Intergenic Intergenic -7024 NM_001142864 9780 Hs.377001 NM_001142864 ENSG00000103335 PIEZO1 DHS|FAM38A|LMPH3|LMPHM6|Mib piezo type mechanosensitive ion channel component 1 protein-coding chrX-603 chrX 136170440 136170650 + 10.1 0.000 intron (NM_001369328, intron 2 of 7) intron (NM_001369328, intron 2 of 7) 908 NM_001167819 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr12-2712 chr12 122389761 122389971 + 10.1 0.000 intron (NM_198240, intron 1 of 23) MSTB|LTR|ERVL-MaLR -5676 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chr11-5852 chr11 9344241 9344451 + 10.1 0.000 Intergenic MamGypsy2-LTR|LTR|Gypsy -29753 NM_015012 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B - transmembrane protein 41B protein-coding chr1-3474 chr1 54579392 54579602 + 10.1 0.000 intron (NM_015547, intron 1 of 16) intron (NM_015547, intron 1 of 16) 31269 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr9-6628 chr9 131021436 131021646 + 10.1 0.000 intron (NM_006059, intron 1 of 27) MER21A|LTR|ERVL 12367 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr5-5011 chr5 83255424 83255634 + 10.1 0.000 intron (NM_001318012, intron 6 of 7) LTR82A|LTR|ERVL 177982 NM_001318012 7518 Hs.567359 NM_003401 ENSG00000152422 XRCC4 SSMED X-ray repair cross complementing 4 protein-coding chr12-1509 chr12 52230567 52230777 + 10.1 0.000 Intergenic Intergenic -2571 NM_005556 3855 Hs.411501 NM_005556 ENSG00000135480 KRT7 CK7|K2C7|K7|SCL keratin 7 protein-coding chr2-12345 chr2 49555247 49555457 + 10.1 0.000 Intergenic Intergenic -400825 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding chr6-4645 chr6 48961157 48961367 + 10.1 0.000 Intergenic Intergenic 501991 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chrX-3869 chrX 3679274 3679484 + 10.1 0.000 intron (NM_005044, intron 1 of 8) L1PA17|LINE|L1 19892 NR_046643 100873944 NR_046643 ENSG00000236188 PRKX-AS1 - PRKX antisense RNA 1 ncRNA chr5-5912 chr5 44504218 44504428 + 10.1 0.000 intron (NR_131946, intron 1 of 2) LTR1F1|LTR|ERV1 5959 NR_131946 102723839 Hs.561412 NR_131946 LINC02224 BRCAT107 long intergenic non-protein coding RNA 2224 ncRNA chr17-8303 chr17 69914791 69915001 + 10.1 0.000 Intergenic Intergenic -46811 NR_110874 102723487 Hs.451409 NR_110874 ENSG00000237560 LINC01497 - long intergenic non-protein coding RNA 1497 ncRNA chr12-2564 chr12 110249323 110249533 + 10.1 0.000 Intergenic Intergenic -31819 NM_001681 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr2-9301 chr2 222792345 222792555 + 10.1 0.000 Intergenic Intergenic -68586 NM_001354159 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr6-1236 chr6 144034219 144034429 + 10.1 0.000 intron (NM_001289040, intron 1 of 5) intron (NM_001289040, intron 1 of 5) 20938 NM_001317159 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr3-7116 chr3 183462665 183462875 + 10.1 0.000 Intergenic Intergenic 8956 NR_145763 109617007 NR_145763 ENSG00000199363 SNORA63E - small nucleolar RNA, H/ACA box 63E snoRNA chr10-5810 chr10 109721921 109722131 + 10.1 0.000 Intergenic Intergenic 201220 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr10-6146 chr10 133388618 133388828 + 10.1 0.000 intron (NR_109764, intron 4 of 6) intron (NR_109764, intron 4 of 6) -5434 NM_138384 92170 Hs.501578 NM_138384 ENSG00000148824 MTG1 GTP|GTPBP7 mitochondrial ribosome associated GTPase 1 protein-coding chr13-1473 chr13 97223778 97223988 + 10.1 0.000 intron (NM_144778, intron 1 of 8) intron (NM_144778, intron 1 of 8) 1550 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chrX-3760 chrX 129433569 129433779 + 10.1 0.000 Intergenic Intergenic 89816 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr2-12589 chr2 70707878 70708088 + 10.1 0.000 intron (NM_001185055, intron 1 of 11) intron (NM_001185055, intron 1 of 11) 59732 NM_001185054 119 Hs.66187 NM_001617 ENSG00000075340 ADD2 ADDB adducin 2 protein-coding chr15-1243 chr15 74588758 74588968 + 10.1 0.000 intron (NM_001307939, intron 4 of 8) intron (NM_001307939, intron 4 of 8) -19509 NM_003992 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr20-862 chr20 64053285 64053495 + 10.1 0.000 Intergenic Intergenic -3582 NM_198723 6919 Hs.505004 NM_003195 ENSG00000171703 TCEA2 TFIIS transcription elongation factor A2 protein-coding chr13-1158 chr13 34308723 34308933 + 10.1 0.000 Intergenic Intergenic -39215 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr20-2408 chr20 19948011 19948221 + 10.1 0.000 intron (NM_001242581, intron 3 of 11) intron (NM_001242581, intron 3 of 11) 58550 NM_018993 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr2-7107 chr2 178272004 178272214 + 10.1 0.000 intron (NM_001201480, intron 1 of 25) intron (NM_001201480, intron 1 of 25) -48133 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr6-4966 chr6 104917065 104917275 + 10.1 0.000 Intergenic L1PA16|LINE|L1 23357 NR_046407 100113403 Hs.649249 NR_046407 ENSG00000203809 LIN28B-AS1 C6orf220|LINC00577|dJ439I14.1 LIN28B antisense RNA 1 ncRNA chr5-5599 chr5 151151940 151152150 + 10.1 0.000 intron (NM_001363114, intron 1 of 24) intron (NM_001363114, intron 1 of 24) 5734 NM_001155 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr10-8808 chr10 108180969 108181179 + 10.1 0.000 Intergenic LTR43B|LTR|ERV1 -111781 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr16-6001 chr16 7790458 7790668 + 10.1 0.000 Intergenic Intergenic 457718 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr20-1692 chr20 35360045 35360255 + 10.1 0.000 intron (NM_001184977, intron 4 of 7) intron (NM_001184977, intron 4 of 7) 51823 NM_018244 55245 Hs.726290 NM_018244 ENSG00000101019 UQCC1 BFZB|C20orf44|CBP3|UQCC ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding chr7-5653 chr7 55587411 55587621 + 10.1 0.000 Intergenic Intergenic -15014 NM_001321243 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr10-5525 chr10 84885461 84885671 + 10.1 0.000 Intergenic HERVL-int|LTR|ERVL 313339 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr12-6205 chr12 23508197 23508407 + 10.1 0.000 Intergenic HERVH-int|LTR|ERV1 76284 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr12-4216 chr12 104351353 104351563 + 10.1 0.000 Intergenic Intergenic 47719 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr11-5410 chr11 67826629 67826839 + 10.1 0.000 Intergenic Intergenic -21398 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr1-10114 chr1 100299712 100299922 + 10.1 0.000 Intergenic LTR33A|LTR|ERVL 18576 NR_030279 693138 NR_030279 ENSG00000207750 MIR553 MIRN553|hsa-mir-553 microRNA 553 ncRNA chr16-4530 chr16 63303048 63303258 + 10.1 0.000 Intergenic Intergenic -1266715 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr5-5076 chr5 95730225 95730435 + 10.1 0.000 intron (NM_001349303, intron 1 of 8) intron (NM_001349303, intron 1 of 8) -1006 NM_014899 22836 Hs.445030 NM_014899 ENSG00000164292 RHOBTB3 - Rho related BTB domain containing 3 protein-coding chr3-5042 chr3 37535448 37535658 + 10.1 0.000 intron (NM_002207, intron 14 of 27) intron (NM_002207, intron 14 of 27) 83412 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr12-4449 chr12 12612618 12612828 + 10.1 0.000 intron (NM_001310, intron 1 of 3) intron (NM_001310, intron 1 of 3) 847 NM_001310 1389 Hs.591156 NM_001310 ENSG00000111269 CREBL2 - cAMP responsive element binding protein like 2 protein-coding chr15-3486 chr15 96329826 96330036 + 10.1 0.000 promoter-TSS (NM_021005) promoter-TSS (NM_021005) -769 NM_021005 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr9-5418 chr9 96064125 96064335 + 10.1 0.000 Intergenic Intergenic -1609 NR_033838 158435 Hs.652615 NR_033838 LOC158435 - uncharacterized LOC158435 ncRNA chr4-4608 chr4 77262550 77262760 + 10.1 0.000 Intergenic Intergenic 105448 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr17-5114 chr17 5766273 5766483 + 10.1 0.000 Intergenic Intergenic -5856 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr11-3738 chr11 32224341 32224551 + 10.1 0.000 Intergenic Intergenic -80534 NR_132770 106635521 NR_132770 SNORA88 - small nucleolar RNA, H/ACA box 88 snoRNA chr7-4116 chr7 45582852 45583062 + 10.1 0.000 intron (NM_001281768, intron 2 of 9) intron (NM_001281768, intron 2 of 9) 8589 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chrX-2046 chrX 17621684 17621894 + 10.1 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -13711 NM_001291868 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr20-4490 chr20 63031530 63031740 + 10.1 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 5393 NR_028295 100144596 Hs.187773 NM_022099 LINC00029 C20orf51|NCRNA00029 long intergenic non-protein coding RNA 29 ncRNA chr1-7798 chr1 50490978 50491188 + 10.1 0.000 intron (NM_007051, intron 16 of 18) intron (NM_007051, intron 16 of 18) -67640 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr10-2010 chr10 62794354 62794564 + 10.1 0.000 Intergenic AluJb|SINE|Alu -10261 NM_032804 84890 Hs.99821 NM_032804 ENSG00000181915 ADO C10orf22 2-aminoethanethiol dioxygenase protein-coding chr17-2743 chr17 79070611 79070821 + 10.1 0.000 Intergenic Intergenic -4221 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr16-3344 chr16 13747469 13747679 + 10.1 0.000 Intergenic MER102b|DNA|hAT-Charlie -172583 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr17-3937 chr17 59871287 59871497 + 10.1 0.000 intron (NM_001193612, intron 6 of 8) AluSc8|SINE|Alu 21551 NM_016261 51174 Hs.463638 NM_016261 ENSG00000108423 TUBD1 TUBD tubulin delta 1 protein-coding chr7-2206 chr7 106795588 106795798 + 10.1 0.000 Intergenic MER5A|DNA|hAT-Charlie -69589 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr3-3903 chr3 46678897 46679107 + 10.1 0.000 intron (NR_135622, intron 15 of 24) intron (NR_135622, intron 15 of 24) 14677 NM_147129 259173 Hs.517937 NM_147129 ENSG00000178038 ALS2CL RN49018 ALS2 C-terminal like protein-coding chrX-4184 chrX 34133837 34134047 + 10.1 0.000 Intergenic Intergenic -1612 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr17-3648 chr17 5355628 5355838 + 10.1 0.000 intron (NM_001083585, intron 8 of 16) intron (NM_001083585, intron 8 of 16) -63908 NM_001160244 84268 Hs.462086 NM_032308 ENSG00000129197 RPAIN HRIP|RIP RPA interacting protein protein-coding chr20-2717 chr20 48538553 48538763 + 10.1 0.000 Intergenic LTR23|LTR|ERV1 178747 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr11-2396 chr11 3063905 3064115 + 10.1 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -6587 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr14-1807 chr14 34981007 34981217 + 10.1 0.000 intron (NR_151701, intron 1 of 4) AluSq|SINE|Alu 1454 NR_151701 100506157 NR_151701 SRP54-AS1 - SRP54 antisense RNA 1 (head to head) ncRNA chr7-3883 chr7 108416196 108416406 + 10.1 0.000 intron (NM_001371132, intron 1 of 30) intron (NM_001371132, intron 1 of 30) 40096 NM_001193583 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr7-2988 chr7 19161478 19161688 + 10.1 0.000 Intergenic Intergenic -16162 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chrX-1627 chrX 118866107 118866317 + 10.1 0.000 intron (NR_110393, intron 6 of 6) intron (NR_110393, intron 6 of 6) 26656 NR_110393 101928287 Hs.496647 NR_110393 ENSG00000203650 LINC01285 - long intergenic non-protein coding RNA 1285 ncRNA chr16-5291 chr16 65871146 65871356 + 10.1 0.000 Intergenic LTR67B|LTR|ERVL -294951 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr4-3423 chr4 76066298 76066508 + 10.1 0.000 intron (NM_001130017, intron 1 of 9) MER52C|LTR|ERV1 -8292 NM_001130016 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr1-3641 chr1 62142614 62142824 + 10.1 0.000 intron (NM_001350145, intron 41 of 43) L2c|LINE|L2 -52130 NM_001164835 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr7-4212 chr7 146549214 146549424 + 10.1 0.000 Intergenic Intergenic -224952 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr14-5189 chr14 94762819 94763029 + 10.1 0.000 Intergenic Intergenic 7238 NM_173849 145258 Hs.440438 NM_173849 ENSG00000133937 GSC SAMS goosecoid homeobox protein-coding chr19-1819 chr19 2750931 2751141 + 10.1 0.000 Intergenic Intergenic -10960 NM_213568 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr2-8622 chr2 143945477 143945687 + 10.1 0.000 TTS (NM_001354362) TTS (NM_001354362) 8515 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr3-4936 chr3 3200784 3200994 + 10.1 0.000 Intergenic Intergenic -21172 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chrX-787 chrX 47247132 47247342 + 10.1 0.000 intron (NM_001371072, intron 18 of 20) intron (NM_001371072, intron 18 of 20) 14228 NM_001371072 chr19-2766 chr19 42122805 42123015 + 10.1 0.000 intron (NM_001207026, intron 1 of 12) intron (NM_001207026, intron 1 of 12) 9536 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr12-5197 chr12 105312002 105312212 + 10.1 0.000 intron (NR_131986, intron 1 of 2) HERVK11-int|LTR|ERVK 14910 NR_131986 105369954 Hs.368938 NR_131986 ENSG00000257642 KCCAT198 - renal clear cell carcinoma-associated transcript 198 ncRNA chr3-9929 chr3 88004984 88005194 + 10.1 0.000 Intergenic Intergenic 22513 NM_000866 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr18-2049 chr18 47205024 47205234 + 10.1 0.000 Intergenic Intergenic -28765 NM_016097 51124 Hs.130917 NM_016097 ENSG00000134049 IER3IP1 HSPC039|MEDS|PRO2309 immediate early response 3 interacting protein 1 protein-coding chr10-9180 chr10 130898867 130899077 + 10.1 0.000 Intergenic Intergenic 63696 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr18-390 chr18 74597900 74598110 + 10.1 0.000 promoter-TSS (NR_024484) promoter-TSS (NR_024484) -170 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr7-6031 chr7 108677341 108677551 + 10.1 0.000 Intergenic L1MA2|LINE|L1 107572 NM_012328 4189 Hs.732494 NM_012328 ENSG00000128590 DNAJB9 ERdj4|MDG-1|MDG1|MST049|MSTP049 DnaJ heat shock protein family (Hsp40) member B9 protein-coding chr13-2714 chr13 93628494 93628704 + 10.1 0.000 intron (NM_005708, intron 2 of 8) intron (NM_005708, intron 2 of 8) 229874 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chrX-2661 chrX 114971113 114971323 + 10.1 0.000 Intergenic L1MB7|LINE|L1 46398 NM_000640 3598 Hs.336046 NM_000640 ENSG00000123496 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor subunit alpha 2 protein-coding chr1-10899 chr1 207344261 207344471 + 10.1 0.000 intron (NM_001114752, intron 10 of 10) L1MA4A|LINE|L1 22688 NM_001114752 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr21-555 chr21 43646810 43647020 + 10.1 0.000 intron (NM_007031, intron 3 of 8) intron (NM_007031, intron 3 of 8) 12573 NM_007031 11077 Hs.406157 NM_007031 ENSG00000160207 HSF2BP - heat shock transcription factor 2 binding protein protein-coding chr17-2523 chr17 14776065 14776275 + 10.1 0.000 Intergenic Intergenic -238635 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr9-5122 chr9 36041178 36041388 + 10.1 0.000 intron (NM_021111, intron 1 of 20) intron (NM_021111, intron 1 of 20) 4370 NM_001316348 8434 Hs.388918 NM_021111 ENSG00000122707 RECK ST15 reversion inducing cysteine rich protein with kazal motifs protein-coding chr3-10210 chr3 121403359 121403569 + 10.1 0.000 intron (NM_001348343, intron 23 of 27) L2a|LINE|L2 142524 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chr16-4361 chr16 46726926 46727136 + 10.1 0.000 intron (NM_182493, intron 8 of 12) MIRb|SINE|MIR 21313 NM_182493 91807 Hs.130465 NM_182493 ENSG00000140795 MYLK3 MLCK|MLCK2|caMLCK myosin light chain kinase 3 protein-coding chr14-3342 chr14 89890750 89890960 + 10.1 0.000 intron (NM_001284269, intron 5 of 5) L1ME3F|LINE|L1 63681 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr11-3565 chr11 46166463 46166673 + 10.1 0.000 Intergenic Intergenic -5387 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chrX-4182 chrX 34089335 34089545 + 10.1 0.000 Intergenic MER52-int|LTR|ERV1 42890 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr18-1779 chr18 11076624 11076834 + 10.1 0.000 intron (NM_022068, intron 1 of 51) intron (NM_022068, intron 1 of 51) 72033 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr2-6931 chr2 110753648 110753858 + 10.1 0.000 intron (NM_001371254, intron 1 of 18) L1ME2z|LINE|L1 21180 NM_001371254 chr11-2465 chr11 60708999 60709209 + 10.1 0.000 intron (NM_031457, intron 5 of 6) L2a|LINE|L2 9492 NM_031457 83661 Hs.150878 NM_031457 ENSG00000166959 MS4A8 4SPAN4|CD20L5|MS4A4|MS4A8B membrane spanning 4-domains A8 protein-coding chr19-6763 chr19 40136791 40137001 + 10.1 0.000 Intergenic L2|LINE|L2 -45953 NM_001142579 284323 Hs.115140 NM_001010880 ENSG00000197782 ZNF780A ZNF780 zinc finger protein 780A protein-coding chr3-3249 chr3 48372623 48372833 + 10.1 0.000 5' UTR (NM_001159927, exon 2 of 10) 5' UTR (NM_001159927, exon 2 of 10) 509 NM_001159927 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding chr14-2135 chr14 77176268 77176478 + 10.1 0.000 Intergenic Intergenic -5425 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding chr19-1793 chr19 52962619 52962829 + 10.1 0.000 5' UTR (NM_001202473, exon 1 of 4) 5' UTR (NM_001202473, exon 1 of 4) 157 NM_001202456 125893 Hs.655592 NM_001031665 ENSG00000180257 ZNF816 ZNF816A zinc finger protein 816 protein-coding chr11-4392 chr11 77155084 77155294 + 10.1 0.000 intron (NM_001127180, intron 4 of 48) intron (NM_001127180, intron 4 of 48) 26943 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr16-4702 chr16 81661370 81661580 + 10.1 0.000 intron (NM_030629, intron 6 of 20) intron (NM_030629, intron 6 of 20) -3879 NR_045112 100129617 Hs.657151 NR_045112 LOC100129617 - uncharacterized LOC100129617 ncRNA chr4-5002 chr4 138158817 138159027 + 10.1 0.000 intron (NR_038380, intron 3 of 6) L2b|LINE|L2 -28237 NR_037866 641365 Hs.435630 NR_037866 ENSG00000248307 LINC00616 - long intergenic non-protein coding RNA 616 ncRNA chr8-3409 chr8 68625565 68625775 + 10.1 0.000 intron (NR_146186, intron 7 of 12) UCON28a|Unknown|Unknown -294179 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr11-4398 chr11 78419394 78419604 + 10.1 0.000 Intergenic Intergenic -1679 NM_080491 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr4-7331 chr4 56565060 56565270 + 10.1 0.000 intron (NM_001256475, intron 4 of 8) L1MEc|LINE|L1 34559 NM_001256475 100506564 Hs.573073 NM_001256475 ENSG00000249693 THEGL - theg spermatid protein like protein-coding chrX-4631 chrX 77911958 77912168 + 10.1 0.000 intron (NM_001282224, intron 1 of 21) intron (NM_001282224, intron 1 of 21) 1370 NM_000052 538 Hs.496414 NM_000052 ENSG00000165240 ATP7A DSMAX|MK|MNK|SMAX3 ATPase copper transporting alpha protein-coding chr9-2597 chr9 4077656 4077866 + 10.1 0.000 intron (NM_001042413, intron 4 of 10) LTR50|LTR|ERVL 74422 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr5-3355 chr5 137660562 137660772 + 10.1 0.000 intron (NM_017415, intron 7 of 14) intron (NM_017415, intron 7 of 14) -13018 NR_030588 100126343 NR_030588 ENSG00000216009 MIR874 MIRN874|hsa-mir-874|mir-874 microRNA 874 ncRNA chr5-2599 chr5 112738475 112738685 + 10.1 0.000 intron (NM_001354904, intron 2 of 15) intron (NM_001354904, intron 2 of 15) 695 NM_001354906 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding chr1-6042 chr1 81409953 81410163 + 10.1 0.000 intron (NM_001366003, intron 2 of 27) intron (NM_001366003, intron 2 of 27) 103663 NM_001366008 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr13-2628 chr13 77597065 77597275 + 10.1 0.000 intron (NM_144777, intron 12 of 32) intron (NM_144777, intron 12 of 32) 9381 NR_126413 104355296 Hs.667682 NR_126412 ENSG00000224347 SCEL-AS1 - SCEL antisense RNA 1 ncRNA chr4-7043 chr4 27738212 27738422 + 10.1 0.000 Intergenic Intergenic 520838 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr10-3999 chr10 132701136 132701346 + 10.1 0.000 intron (NM_005539, intron 6 of 15) intron (NM_005539, intron 6 of 15) 19966 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr11-9990 chr11 78522258 78522468 + 10.1 0.000 intron (NM_024678, intron 6 of 13) Looper|DNA|PiggyBac -10813 NR_120566 101928896 Hs.659055 NR_120566 ENSG00000255084 LOC101928896 - uncharacterized LOC101928896 ncRNA chr3-6212 chr3 64011799 64012009 + 10.1 0.000 non-coding (NR_038286, exon 3 of 3) non-coding (NR_038286, exon 3 of 3) 7882 NR_038286 100507062 Hs.152536 NR_038286 ENSG00000239653 PSMD6-AS2 - PSMD6 antisense RNA 2 ncRNA chr9-2998 chr9 92538756 92538966 + 10.1 0.000 intron (NM_001286969, intron 4 of 6) intron (NM_001286969, intron 4 of 6) -2769 NM_001197295 1842 Hs.117060 NM_001393 ENSG00000106823 ECM2 - extracellular matrix protein 2 protein-coding chr10-5996 chr10 124925987 124926197 + 10.1 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -16031 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr6-4723 chr6 63341919 63342129 + 10.1 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -22041 NM_016571 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr10-4379 chr10 44205503 44205713 + 10.1 0.000 Intergenic Intergenic -87142 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr11-6612 chr11 73691488 73691698 + 10.1 0.000 intron (NM_001243718, intron 3 of 4) L2c|LINE|L2 42680 NM_001130036 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr2-9093 chr2 204208733 204208943 + 10.1 0.000 Intergenic MSTD|LTR|ERVL-MaLR 272090 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr9-7293 chr9 8859267 8859477 + 10.1 0.000 intron (NR_121600, intron 1 of 1) intron (NR_121600, intron 1 of 1) 1354 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr10-3008 chr10 100680990 100681200 + 10.1 0.000 Intergenic CpG -54301 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr6-3127 chr6 106064684 106064894 + 10.1 0.000 Intergenic MIRb|SINE|MIR -21547 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr14-1607 chr14 100548557 100548767 + 10.1 0.000 intron (NM_001159531, intron 1 of 5) intron (NM_001159531, intron 1 of 5) 19408 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr15-2068 chr15 60759140 60759350 + 10.1 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 77676 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr13-879 chr13 31050537 31050747 + 10.1 0.000 Intergenic Intergenic 111262 NM_006644 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr18-779 chr18 34767735 34767945 + 10.1 0.000 intron (NM_001198945, intron 4 of 10) MSTC|LTR|ERVL-MaLR 11864 NM_001391 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr20-3072 chr20 9503664 9503874 + 10.1 0.000 Intergenic MER49|LTR|ERV1 -10589 NM_001199897 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chr3-4752 chr3 97992842 97993052 + 10.1 0.000 non-coding (NR_047685, exon 9 of 10) non-coding (NR_047685, exon 9 of 10) -20496 NM_001261829 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr4-8058 chr4 121729088 121729298 + 10.1 0.000 Intergenic Intergenic -32213 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr6-3760 chr6 13992722 13992932 + 10.1 0.000 Intergenic L1MC3|LINE|L1 67634 NM_001165033 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chr6-4523 chr6 38604198 38604408 + 10.1 0.000 intron (NM_001099272, intron 1 of 10) intron (NM_001099272, intron 1 of 10) -8236 NM_152733 114781 Hs.603858 NM_052893 ENSG00000183826 BTBD9 dJ322I12.1 BTB domain containing 9 protein-coding chr12-3567 chr12 24039067 24039277 + 10.1 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -88140 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr6-1963 chr6 139029213 139029423 + 10.1 0.000 intron (NM_021243, intron 1 of 2) CpG 573 NM_021243 58527 Hs.600861 NM_021243 ENSG00000146386 ABRACL C6orf115|Costars|HSPC280|PRO2013 ABRA C-terminal like protein-coding chr9-5044 chr9 31401580 31401790 + 10.1 0.000 Intergenic MLT2B1|LTR|ERVL -20195 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr6-2215 chr6 42907895 42908105 + 10.1 0.000 Intergenic ERVL-E-int|LTR|ERVL -7989 NM_001243170 171558 Hs.169002 NM_138296 ENSG00000171611 PTCRA PT-ALPHA|PTA pre T cell antigen receptor alpha protein-coding chr4-2849 chr4 56238196 56238406 + 10.1 0.000 intron (NM_020722, intron 2 of 10) MLT1G1|LTR|ERVL-MaLR 68106 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr7-2836 chr7 101401862 101402072 + 10.1 0.000 intron (NM_133457, intron 1 of 12) intron (NM_133457, intron 1 of 12) 39092 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr19-4536 chr19 9140557 9140767 + 10.1 0.000 intron (NR_102435, intron 1 of 6) CpG 265 NM_020933 57693 Hs.465829 NM_020933 ENSG00000130803 ZNF317 - zinc finger protein 317 protein-coding chr2-12252 chr2 44678258 44678468 + 10.1 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 260525 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr10-5992 chr10 124579873 124580083 + 10.1 0.000 intron (NM_022126, intron 6 of 6) L1ME3Cz|LINE|L1 118155 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr20-4329 chr20 53277980 53278190 + 10.1 0.000 intron (NM_173485, intron 2 of 2) intron (NM_173485, intron 2 of 2) 92802 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr11-6197 chr11 45686724 45686934 + 10.1 0.000 Intergenic Intergenic 4947 NR_106976 102465691 NR_106976 ENSG00000276639 MIR7154 hsa-mir-7154 microRNA 7154 ncRNA chrX-4806 chrX 100195152 100195362 + 10.1 0.000 Intergenic Intergenic 215016 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr1-6977 chr1 162279354 162279564 + 10.1 0.000 intron (NM_014697, intron 2 of 9) intron (NM_014697, intron 2 of 9) -63087 NR_030283 693141 NR_030283 ENSG00000207729 MIR556 MIRN556|hsa-mir-556|mir-556 microRNA 556 ncRNA chr3-2318 chr3 128439304 128439514 + 10.1 0.000 Intergenic LTR16E2|LTR|ERVL -24185 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr3-6142 chr3 56862331 56862541 + 10.1 0.000 intron (NM_001128615, intron 4 of 12) intron (NM_001128615, intron 4 of 12) 54000 NM_001289698 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr16-4385 chr16 49792788 49792998 + 10.1 0.000 intron (NM_001271620, intron 1 of 7) AluJo|SINE|Alu 29845 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr3-8638 chr3 172849128 172849338 + 10.1 0.000 Intergenic Intergenic 98231 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr6-3563 chr6 54137875 54138085 + 10.1 0.000 exon (NM_001281747, exon 4 of 14) exon (NM_001281747, exon 4 of 14) 26537 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr22-2236 chr22 24931110 24931320 + 10.1 0.000 Intergenic Intergenic 15480 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding chr5-3860 chr5 134302957 134303167 + 10.1 0.000 intron (NM_001113575, intron 11 of 12) intron (NM_001113575, intron 11 of 12) 64012 NM_016508 51265 Hs.719926 NM_016508 ENSG00000006837 CDKL3 NKIAMRE cyclin dependent kinase like 3 protein-coding chr19-3600 chr19 50451190 50451400 + 10.1 0.000 exon (NM_004533, exon 15 of 28) exon (NM_004533, exon 15 of 28) 18403 NM_004533 4606 Hs.85937 NM_004533 ENSG00000086967 MYBPC2 MYBPC|MYBPCF myosin binding protein C, fast type protein-coding chr2-4822 chr2 60533079 60533289 + 10.1 0.000 intron (NM_138559, intron 2 of 4) intron (NM_138559, intron 2 of 4) 20314 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr4-5556 chr4 139593179 139593389 + 10.1 0.000 Intergenic Intergenic -36515 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr12-5287 chr12 110816950 110817160 + 10.1 0.000 Intergenic MIR|SINE|MIR -29932 NM_001286244 160762 Hs.437141 NM_152591 ENSG00000173093 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding chr8-5316 chr8 144198031 144198241 + 10.1 0.000 intron (NM_001099281, intron 9 of 11) intron (NM_001099281, intron 9 of 11) 49491 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr11-6786 chr11 88411453 88411663 + 10.1 0.000 Intergenic Intergenic -73822 NM_148170 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding chr14-1955 chr14 32820481 32820691 + 10.1 0.000 intron (NM_004274, intron 12 of 13) intron (NM_004274, intron 12 of 13) -118293 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr8-4278 chr8 95150005 95150215 + 10.1 0.000 intron (NM_024613, intron 1 of 1) intron (NM_024613, intron 1 of 1) 16325 NM_024613 79666 Hs.29724 NM_024613 ENSG00000175895 PLEKHF2 EAPF|PHAFIN2|ZFYVE18 pleckstrin homology and FYVE domain containing 2 protein-coding chr4-5280 chr4 175080279 175080489 + 10.1 0.000 Intergenic L1MA2|LINE|L1 162026 NM_001130704 11086 Hs.126838 NM_014269 ENSG00000168594 ADAM29 CT73|svph1 ADAM metallopeptidase domain 29 protein-coding chrX-1113 chrX 18727907 18728117 + 10.1 0.000 intron (NM_152226, intron 4 of 17) MER21A|LTR|ERVL -35325 NR_046642 100874004 NR_046642 PPEF1-AS1 - PPEF1 antisense RNA 1 ncRNA chr14-2928 chr14 41850062 41850272 + 10.1 0.000 intron (NM_001330106, intron 2 of 4) intron (NM_001330106, intron 2 of 4) 243311 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr8-5197 chr8 106637189 106637399 + 10.1 0.000 intron (NM_018002, intron 3 of 15) intron (NM_018002, intron 3 of 15) -20514 NM_181354 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr17-5966 chr17 76819660 76819870 + 10.1 0.000 Intergenic Intergenic 20721 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr4-5000 chr4 137998198 137998408 + 10.1 0.000 Intergenic Intergenic -90711 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr2-5211 chr2 44788116 44788326 + 10.1 0.000 Intergenic Intergenic 150667 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr6-2543 chr6 23728797 23729007 + 10.1 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -397313 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr19-3666 chr19 8092943 8093153 + 10.1 0.000 intron (NM_032447, intron 47 of 63) L1PB2|LINE|L1 40286 NM_005624 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr2-10357 chr2 166731442 166731652 + 10.1 0.000 Intergenic Intergenic -156940 NM_152381 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr2-9493 chr2 236370892 236371102 + 10.1 0.000 intron (NR_073043, intron 13 of 19) intron (NR_073043, intron 13 of 19) -106652 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr16-2400 chr16 69830818 69831028 + 10.1 0.000 intron (NM_001270455, intron 4 of 8) intron (NM_001270455, intron 4 of 8) -7814 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr5-3213 chr5 84239581 84239791 + 10.1 0.000 intron (NM_005711, intron 2 of 10) intron (NM_005711, intron 2 of 10) 145181 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr8-2481 chr8 141189635 141189845 + 10.1 0.000 intron (NM_001362798, intron 19 of 21) intron (NM_001362798, intron 19 of 21) 38834 NM_001286648 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr17-5838 chr17 66812374 66812584 + 10.1 0.000 Intergenic Intergenic -22638 NM_145811 27091 Hs.278907 NM_014404 ENSG00000075429 CACNG5 - calcium voltage-gated channel auxiliary subunit gamma 5 protein-coding chr11-5517 chr11 86193566 86193776 + 10.1 0.000 Intergenic Intergenic -50713 NM_001308007 8726 Hs.503510 NM_003797 ENSG00000074266 EED COGIS|HEED|WAIT1 embryonic ectoderm development protein-coding chr1-14544 chr1 52072890 52073100 + 10.1 0.000 intron (NM_001243767, intron 3 of 4) AluSg|SINE|Alu 16700 NM_152265 91408 Hs.429839 NM_152265 ENSG00000134717 BTF3L4 - basic transcription factor 3 like 4 protein-coding chr6-2776 chr6 132595264 132595474 + 10.1 0.000 Intergenic Intergenic -5631 NM_003967 9038 Hs.248198 NM_003967 ENSG00000135569 TAAR5 PNR trace amine associated receptor 5 protein-coding chr1-7035 chr1 175268859 175269069 + 10.1 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -75977 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr10-2918 chr10 449270 449480 + 10.1 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -179189 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr22-2360 chr22 43796652 43796862 + 10.1 0.000 intron (NM_022785, intron 2 of 31) intron (NM_022785, intron 2 of 31) 15548 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr16-3855 chr16 68071841 68072051 + 10.1 0.000 intron (NM_017803, intron 12 of 16) intron (NM_017803, intron 12 of 16) -13424 NM_004555 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr2-4915 chr2 151150561 151150771 + 10.1 0.000 Intergenic Intergenic 111197 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr1-7946 chr1 179125048 179125258 + 10.1 0.000 intron (NM_007314, intron 4 of 11) MER58A|DNA|hAT-Charlie 17923 NM_001136000 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr9-5727 chr9 126075202 126075412 + 10.1 0.000 Intergenic HERVH-int|LTR|ERV1 200608 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr4-4165 chr4 8352092 8352302 + 10.1 0.000 Intergenic Intergenic 32021 NR_149125 105374374 Hs.145224 NR_149125 ENSG00000249145 LINC02517 - long intergenic non-protein coding RNA 2517 ncRNA chr18-1246 chr18 52052401 52052611 + 10.1 0.000 Intergenic Intergenic -287691 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr1-8385 chr1 75046039 75046249 + 10.1 0.000 Intergenic AluJb|SINE|Alu -82290 NM_001001933 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr19-4797 chr19 34843415 34843625 + 10.1 0.000 Intergenic L1MB4|LINE|L1 -10651 NR_033982 400685 Hs.730118 NR_033982 ENSG00000267767 LINC01801 - long intergenic non-protein coding RNA 1801 ncRNA chr18-1916 chr18 33533773 33533983 + 10.1 0.000 Intergenic L1PA15-16|LINE|L1 -44341 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chrX-1260 chrX 103259102 103259312 + 10.1 0.000 Intergenic Intergenic -4014 NM_001006684 90843 Hs.389734 NM_153333 ENSG00000180964 TCEAL8 WEX3 transcription elongation factor A like 8 protein-coding chr2-11143 chr2 141672875 141673085 + 10.1 0.000 intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 458721 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr3-2049 chr3 133591595 133591805 + 10.1 0.000 Intergenic L1MB7|LINE|L1 17266 NM_001282765 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr11-2638 chr11 44167024 44167234 + 10.1 0.000 intron (NM_001178083, intron 8 of 14) L1MEg|LINE|L1 70932 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr7-4013 chr7 147099223 147099433 + 10.1 0.000 intron (NM_014141, intron 3 of 22) MER74A|LTR|ERVL -1719 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr3-2178 chr3 187319931 187320141 + 10.1 0.000 Intergenic Intergenic -28014 NM_001031849 5648 Hs.89983 NM_001879 ENSG00000127241 MASP1 3MC1|CRARF|CRARF1|MAP1|MASP|MASP3|MAp44|PRSS5|RaRF mannan binding lectin serine peptidase 1 protein-coding chr8-3991 chr8 53529387 53529597 + 10.1 0.000 Intergenic Intergenic -5527 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr8-1469 chr8 22567185 22567395 + 10.1 0.000 intron (NM_001018003, intron 5 of 9) intron (NM_001018003, intron 5 of 9) 1561 NM_001018003 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr7-4333 chr7 43782967 43783177 + 10.1 0.000 intron (NM_001253823, intron 3 of 8) intron (NM_001253823, intron 3 of 8) 24392 NM_000712 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chr13-2530 chr13 60692331 60692541 + 10.1 0.000 intron (NR_047003, intron 3 of 4) intron (NR_047003, intron 3 of 4) 19481 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr15-478 chr15 96322144 96322354 + 10.1 0.000 intron (NR_102744, intron 1 of 1) CpG -3797 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr4-7991 chr4 114646907 114647117 + 10.1 0.000 intron (NM_003360, intron 1 of 4) intron (NM_003360, intron 1 of 4) -9747 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chrX-653 chrX 73850454 73850664 + 10.1 0.000 non-coding (NR_001564, exon 1 of 6) non-coding (NR_001564, exon 1 of 6) 2194 NR_001564 7503 Hs.529901 NR_001564 ENSG00000229807 XIST DXS1089|DXS399E|LINC00001|NCRNA00001|SXI1|swd66 X inactive specific transcript ncRNA chr11-4151 chr11 46911656 46911866 + 10.1 0.000 intron (NM_002334, intron 1 of 37) MIRb|SINE|MIR 6789 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chr4-4635 chr4 80694241 80694451 + 10.1 0.000 intron (NM_001206997, intron 4 of 6) intron (NM_001206997, intron 4 of 6) -336362 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr3-7649 chr3 32206644 32206854 + 10.1 0.000 Intergenic Intergenic -31930 NM_001320308 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr4-4801 chr4 104886521 104886731 + 10.1 0.000 Intergenic Intergenic -259249 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr2-3418 chr2 62137399 62137609 + 10.1 0.000 Intergenic Intergenic -58611 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chrX-783 chrX 45070373 45070583 + 10.1 0.000 intron (NR_111960, intron 16 of 27) intron (NR_111960, intron 16 of 27) 130398 NM_176819 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr6-4179 chr6 2056156 2056366 + 10.1 0.000 intron (NM_001253846, intron 4 of 10) MIR|SINE|MIR 119730 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr6-3810 chr6 33942428 33942638 + 10.1 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 43398 NR_106982 102466816 NR_106982 ENSG00000276824 MIR7159 hsa-mir-7159 microRNA 7159 ncRNA chr12-4411 chr12 6834450 6834660 + 10.1 0.000 intron (NM_014262, intron 9 of 14) L2c|LINE|L2 6148 NM_014262 10536 Hs.631655 NM_014262 ENSG00000110811 P3H3 GRCB|HSU47926|LEPREL2 prolyl 3-hydroxylase 3 protein-coding chr20-1795 chr20 62181996 62182206 + 10.1 0.000 promoter-TSS (NM_015666) promoter-TSS (NM_015666) -924 NM_015666 26164 Hs.340636 NM_015666 ENSG00000101181 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome associated GTPase 2 protein-coding chr14-2753 chr14 102110988 102111198 + 10.1 0.000 intron (NM_001017963, intron 1 of 11) THE1B-int|LTR|ERVL-MaLR -24049 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr2-3717 chr2 229780923 229781133 + 10.1 0.000 intron (NM_001348330, intron 34 of 41) intron (NM_001348330, intron 34 of 41) -66473 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr5-5939 chr5 79791468 79791678 + 10.1 0.000 intron (NM_153610, intron 11 of 12) AluSz|SINE|Alu 101737 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr12-4806 chr12 55930708 55930918 + 10.1 0.000 promoter-TSS (NM_001345) promoter-TSS (NM_001345) -349 NM_001345 1606 Hs.524488 NM_001345 ENSG00000065357 DGKA DAGK|DAGK1|DGK-alpha diacylglycerol kinase alpha protein-coding chr12-4504 chr12 22447400 22447610 + 10.1 0.000 Intergenic Intergenic 96692 NM_001286174 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding chr5-5871 chr5 6454825 6455035 + 10.1 0.000 intron (NM_001145161, intron 1 of 1) intron (NM_001145161, intron 1 of 1) 6071 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr7-7712 chr7 363009 363219 + 10.1 0.000 Intergenic L1M5|LINE|L1 -16311 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr8-1958 chr8 58787913 58788123 + 10.1 0.000 Intergenic Intergenic -128165 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr2-6934 chr2 111694894 111695104 + 10.1 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 76135 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr1-4951 chr1 52853966 52854176 + 10.1 0.000 intron (NM_001307931, intron 1 of 12) MER2|DNA|TcMar-Tigger 11311 NM_001004339 440590 Hs.658458 NM_001004339 ENSG00000203995 ZYG11A ZYG11 zyg-11 family member A, cell cycle regulator protein-coding chr10-2310 chr10 37390030 37390240 + 10.1 0.000 Intergenic AluJr|SINE|Alu 80949 NR_104061 101929520 Hs.144151 NR_104061 ENSG00000235687 LINC00993 - long intergenic non-protein coding RNA 993 ncRNA chr3-10789 chr3 159309274 159309484 + 10.1 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 26733 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr18-589 chr18 39406044 39406254 + 10.1 0.000 intron (NR_024391, intron 3 of 3) intron (NR_024391, intron 3 of 3) 216026 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr13-2490 chr13 51941616 51941826 + 10.1 0.000 intron (NM_001005918, intron 11 of 16) intron (NM_001005918, intron 11 of 16) 69729 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chr4-4957 chr4 129064770 129064980 + 10.1 0.000 intron (NM_001300898, intron 2 of 5) L1M5|LINE|L1 28664 NM_001300898 132320 Hs.654690 NM_144643 ENSG00000151466 SCLT1 CAP-1A|CAP1A sodium channel and clathrin linker 1 protein-coding chr3-3753 chr3 5275590 5275800 + 10.1 0.000 Intergenic Intergenic -25440 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr18-2586 chr18 12515595 12515805 + 10.1 0.000 intron (NM_020148, intron 4 of 15) LTR16|LTR|ERVL 82926 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chr14-2354 chr14 23397528 23397738 + 10.1 0.000 intron (NM_002471, intron 15 of 38) intron (NM_002471, intron 15 of 38) -8967 NR_029595 406990 NR_029595 ENSG00000199157 MIR208A MIR208|MIRN208|MIRN208A|hsa-mir-208a|miRNA208 microRNA 208a ncRNA chr5-8975 chr5 161350625 161350835 + 10.1 0.000 intron (NM_000813, intron 6 of 9) MLT2A2|LTR|ERVL 197394 NM_021911 2561 Hs.303527 NM_000813 ENSG00000145864 GABRB2 ICEE2 gamma-aminobutyric acid type A receptor beta2 subunit protein-coding chrX-826 chrX 103064095 103064305 + 10.1 0.000 promoter-TSS (NM_018476) promoter-TSS (NM_018476) -29 NM_018476 55859 Hs.334370 NM_018476 ENSG00000133169 BEX1 BEX2|HBEX2|HGR74-h brain expressed X-linked 1 protein-coding chr9-4040 chr9 93737813 93738023 + 10.1 0.000 Intergenic L1MCa|LINE|L1 -81439 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA chr20-2397 chr20 19021174 19021384 + 10.1 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -191076 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr2-12509 chr2 64298204 64298414 + 10.1 0.000 Intergenic Intergenic -42450 NR_039632 100616265 NR_039632 ENSG00000283222 MIR4433A MIR4433|hsa-mir-4433a microRNA 4433a ncRNA chr4-3940 chr4 168011456 168011666 + 10.1 0.000 Intergenic Intergenic -80976 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr11-6714 chr11 79594003 79594213 + 10.1 0.000 Intergenic Intergenic -153078 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr22-1376 chr22 35966330 35966540 + 10.1 0.000 intron (NM_001082578, intron 1 of 13) L1ME3A|LINE|L1 -4805 NM_001349992 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr12-7844 chr12 103138200 103138410 + 10.1 0.000 Intergenic MSTA|LTR|ERVL-MaLR -13537 NR_126333 101929058 Hs.171310 NR_126333 ENSG00000257860 LOC101929058 - uncharacterized LOC101929058 ncRNA chr2-2760 chr2 215354665 215354875 + 10.1 0.000 Intergenic L1MEh|LINE|L1 42711 NM_004044 471 Hs.90280 NM_004044 ENSG00000138363 ATIC AICAR|AICARFT|HEL-S-70p|IMPCHASE|PURH 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding chrX-1682 chrX 6165946 6166156 + 10.1 0.000 intron (NM_181332, intron 1 of 5) Charlie4a|DNA|hAT-Charlie -60307 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr12-1651 chr12 46402599 46402809 + 10.1 0.000 intron (NR_125381, intron 2 of 2) intron (NR_125381, intron 2 of 2) 18597 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr9-6334 chr9 4629132 4629342 + 10.1 0.000 intron (NR_148443, intron 2 of 7) intron (NR_148443, intron 2 of 7) 32986 NR_148447 55064 Hs.179615 NM_017985 ENSG00000106686 SPATA6L C9orf68|bA6J24.2 spermatogenesis associated 6 like protein-coding chr4-3903 chr4 147835919 147836129 + 10.1 0.000 intron (NM_024605, intron 3 of 22) intron (NM_024605, intron 3 of 22) 53429 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr6-2453 chr6 17270537 17270747 + 10.1 0.000 Intergenic L1M5|LINE|L1 -10719 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr2-7680 chr2 30162594 30162804 + 10.1 0.000 Intergenic MER4B-int|LTR|ERV1 15692 NM_001127399 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr11-7505 chr11 4777759 4777969 + 10.1 0.000 Intergenic L1ME3A|LINE|L1 -7926 NM_001004752 256892 NM_001004752 ENSG00000280021 OR51F1 OR11-21|OR51F1P olfactory receptor family 51 subfamily F member 1 (gene/pseudogene) protein-coding chr2-11353 chr2 205288318 205288528 + 10.1 0.000 intron (NM_057177, intron 16 of 21) intron (NM_057177, intron 16 of 21) -394077 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr8-7010 chr8 109325911 109326121 + 10.1 0.000 intron (NM_032869, intron 1 of 9) intron (NM_032869, intron 1 of 9) 3917 NM_001128211 84955 Hs.380291 NM_032869 ENSG00000120526 NUDCD1 CML66|OVA66 NudC domain containing 1 protein-coding chr21-931 chr21 39014855 39015065 + 10.1 0.000 Intergenic Intergenic -37186 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr12-1673 chr12 67069053 67069263 + 10.1 0.000 Intergenic CpG 27126 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr12-4400 chr12 6318131 6318341 + 10.1 0.000 intron (NM_001144857, intron 9 of 14) intron (NM_001144857, intron 9 of 14) 5585 NM_001144857 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr3-3300 chr3 150859503 150859713 + 10.1 0.000 Intergenic HERV17-int|LTR|ERV1 45831 NM_001351281 646951 Hs.380222 NM_001351281 MINDY4B C3orf76|FAM188B2 MINDY family member 4B protein-coding chr9-4280 chr9 109957181 109957391 + 10.1 0.000 intron (NM_147150, intron 6 of 9) intron (NM_147150, intron 6 of 9) -91312 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr6-6917 chr6 14310069 14310279 + 10.1 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -24720 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr12-3669 chr12 121344433 121344643 + 10.1 0.000 intron (NM_001137559, intron 4 of 16) AluSx1|SINE|Alu 7873 NM_016237 51433 Hs.7101 NM_016237 ENSG00000089053 ANAPC5 APC5 anaphase promoting complex subunit 5 protein-coding chr11-6701 chr11 78218799 78219009 + 10.1 0.000 3' UTR (NM_080491, exon 10 of 10) 3' UTR (NM_080491, exon 10 of 10) 29985 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr19-5091 chr19 55276915 55277125 + 10.1 0.000 intron (NM_001297600, intron 2 of 6) intron (NM_001297600, intron 2 of 6) 2836 NM_001297600 23640 Hs.53066 NM_012267 ENSG00000133265 HSPBP1 FES1 HSPA (Hsp70) binding protein 1 protein-coding chr10-2523 chr10 47352651 47352861 + 10.1 0.000 intron (NM_002900, intron 1 of 3) intron (NM_002900, intron 1 of 3) 4393 NM_002900 5949 Hs.591928 NM_002900 ENSG00000265203 RBP3 D10S64|D10S65|D10S66|IRBP|RBPI|RP66 retinol binding protein 3 protein-coding chr7-5610 chr7 51664290 51664500 + 10.1 0.000 Intergenic Intergenic -271139 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr4-4911 chr4 122678807 122679017 + 10.1 0.000 intron (NR_104126, intron 10 of 10) intron (NR_104126, intron 10 of 10) 53546 NR_024041 729338 Hs.647968 NR_024041 CETN4P - centrin 4, pseudogene pseudo chr6-2357 chr6 133569046 133569256 + 10.1 0.000 intron (NR_109982, intron 4 of 8) intron (NR_109982, intron 4 of 8) -251996 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr15-1543 chr15 66326987 66327197 + 10.1 0.000 intron (NM_001323944, intron 12 of 16) AluSg|SINE|Alu 20250 NR_004388 692149 NR_004388 ENSG00000252712 SCARNA14 U100 small Cajal body-specific RNA 14 ncRNA chr3-5347 chr3 136350241 136350451 + 10.1 0.000 intron (NM_005862, intron 28 of 33) L1M4b|LINE|L1 100006 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr20-1726 chr20 41367821 41368031 + 10.1 0.000 Intergenic Intergenic -1108 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr3-1921 chr3 182793737 182793947 + 10.1 0.000 intron (NM_014616, intron 1 of 29) CpG 338 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr10-4907 chr10 21724870 21725080 + 10.1 0.000 intron (NM_001195626, intron 14 of 22) intron (NM_001195626, intron 14 of 22) 190803 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr22-2122 chr22 33380757 33380967 + 10.1 0.000 intron (NM_133642, intron 9 of 14) intron (NM_133642, intron 9 of 14) 55807 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr16-5014 chr16 31306402 31306612 + 10.1 0.000 intron (NM_001145808, intron 14 of 29) intron (NM_001145808, intron 14 of 29) 46532 NM_000632 3684 Hs.172631 NM_000632 ENSG00000169896 ITGAM CD11B|CR3A|MAC-1|MAC1A|MO1A|SLEB6 integrin subunit alpha M protein-coding chr4-1574 chr4 3765431 3765641 + 10.1 0.000 promoter-TSS (NM_000683) promoter-TSS (NM_000683) -849 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr2-4417 chr2 110748588 110748798 + 10.1 0.000 intron (NM_001371254, intron 1 of 18) intron (NM_001371254, intron 1 of 18) 16120 NM_001371254 chr13-1407 chr13 27135909 27136119 + 10.1 0.000 intron (NR_046547, intron 1 of 2) intron (NR_046547, intron 1 of 2) 10481 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr4-7242 chr4 46044765 46044975 + 10.1 0.000 intron (NM_173536, intron 8 of 8) intron (NM_173536, intron 8 of 8) 79184 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr1-10369 chr1 155162680 155162890 + 10.1 0.000 Intergenic AluSx|SINE|Alu 10543 NM_173852 200185 Hs.516671 NM_173852 ENSG00000163463 KRTCAP2 KCP2 keratinocyte associated protein 2 protein-coding chr5-5420 chr5 136507711 136507921 + 10.1 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -142340 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr3-4065 chr3 81915671 81915881 + 10.1 0.000 Intergenic Intergenic -70366 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr1-4798 chr1 19287520 19287730 + 10.1 0.000 intron (NM_012067, intron 1 of 6) intron (NM_012067, intron 1 of 6) 1145 NM_012067 22977 Hs.6980 NM_012067 ENSG00000162482 AKR7A3 AFAR2 aldo-keto reductase family 7 member A3 protein-coding chr10-4277 chr10 6525471 6525681 + 10.1 0.000 intron (NM_001323265, intron 1 of 17) intron (NM_001323265, intron 1 of 17) 54700 NM_001323266 5588 Hs.498570 NM_006257 ENSG00000065675 PRKCQ PRKCT|nPKC-theta protein kinase C theta protein-coding chr22-2614 chr22 32220961 32221171 + 10.1 0.000 intron (NM_014227, intron 13 of 14) intron (NM_014227, intron 13 of 14) 15951 NR_149072 110806273 Hs.382171 NR_149072 ENSG00000242082 SLC5A4-AS1 - SLC5A4 antisense RNA 1 ncRNA chr2-1820 chr2 88170203 88170413 + 10.1 0.000 promoter-TSS (NM_001244676) promoter-TSS (NM_001244676) 13 NM_001244676 55258 Hs.739080 NM_018271 ENSG00000144115 THNSL2 SOFAT|THS2|TSH2 threonine synthase like 2 protein-coding chrX-2801 chrX 134098242 134098452 + 10.1 0.000 Intergenic ERVL-int|LTR|ERVL 71105 NR_029852 574031 NR_029852 ENSG00000284499 MIR363 MIR-363|MIRN363|hsa-mir-363 microRNA 363 ncRNA chr12-4243 chr12 112231344 112231554 + 10.1 0.000 intron (NM_001109662, intron 39 of 75) intron (NM_001109662, intron 39 of 75) -68128 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr8-2306 chr8 139633615 139633825 + 10.1 0.000 intron (NR_104210, intron 1 of 3) intron (NR_104210, intron 1 of 3) 69403 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr2-9545 chr2 239411961 239412171 + 10.1 0.000 Intergenic Intergenic 10318 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr3-5907 chr3 40395649 40395859 + 10.1 0.000 intron (NR_040100, intron 3 of 3) LTR16C|LTR|ERVL 8570 NM_001291961 956 Hs.441145 NM_001248 ENSG00000168032 ENTPD3 CD39L3|HB6|NTPDase-3 ectonucleoside triphosphate diphosphohydrolase 3 protein-coding chr8-2090 chr8 133165856 133166066 + 10.1 0.000 Intergenic Intergenic -25078 NR_037944 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr16-3772 chr16 29115449 29115659 + 10.1 0.000 intron (NR_003369, intron 16 of 16) intron (NR_003369, intron 16 of 16) 40712 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr13-2004 chr13 34258730 34258940 + 10.1 0.000 Intergenic Intergenic -89208 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr15-2909 chr15 43433303 43433513 + 10.1 0.000 intron (NM_001355001, intron 17 of 28) intron (NM_001355001, intron 17 of 28) 59748 NM_001141979 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding chr15-2707 chr15 89165007 89165217 + 10.1 0.000 intron (NM_007011, intron 9 of 14) intron (NM_007011, intron 9 of 14) 56467 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chrX-1226 chrX 80877099 80877309 + 10.1 0.000 Intergenic Intergenic -67327 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr2-8071 chr2 73909407 73909617 + 10.1 0.000 intron (NM_001615, intron 5 of 8) Tigger3|DNA|TcMar-Tigger 16504 NM_001199893 72 Hs.516105 NM_001615 ENSG00000163017 ACTG2 ACT|ACTA3|ACTE|ACTL3|ACTSG|VSCM actin gamma 2, smooth muscle protein-coding chr5-7073 chr5 172801336 172801546 + 10.1 0.000 Intergenic Intergenic -30246 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr6-4022 chr6 124652343 124652553 + 10.1 0.000 intron (NM_001300738, intron 4 of 7) MSTD-int|LTR|ERVL-MaLR -310097 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr3-4946 chr3 9603059 9603269 + 10.1 0.000 Intergenic Intergenic -46341 NM_022485 64419 Hs.475382 NM_022485 ENSG00000163719 MTMR14 C3orf29 myotubularin related protein 14 protein-coding chr5-5638 chr5 155608569 155608779 + 10.1 0.000 Intergenic Intergenic 594919 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr19-4113 chr19 17773316 17773526 + 10.1 0.000 intron (NM_001161357, intron 11 of 28) intron (NM_001161357, intron 11 of 28) -21717 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr5-2292 chr5 52450676 52450886 + 10.1 0.000 Intergenic Intergenic -337135 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr11-4134 chr11 44469880 44470090 + 10.1 0.000 Intergenic Intergenic -95678 NM_001024844 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr7-3936 chr7 129176721 129176931 + 10.1 0.000 Intergenic L1MD2|LINE|L1 -11807 NM_005631 6608 Hs.437846 NM_005631 ENSG00000128602 SMO CRJS|FZD11|Gx|SMOH smoothened, frizzled class receptor protein-coding chr12-5152 chr12 100733924 100734134 + 10.1 0.000 Intergenic Intergenic -60747 NM_001286615 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chrX-2301 chrX 53559312 53559522 + 10.1 0.000 exon (NM_031407, exon 57 of 84) exon (NM_031407, exon 57 of 84) -2143 NR_029484 406889 NR_029484 ENSG00000208012 MIRLET7F2 LET7F2|MIRNLET7F2|let-7f-2 microRNA let-7f-2 ncRNA chr9-5928 chr9 133606991 133607201 + 10.1 0.000 Intergenic Intergenic -26850 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr7-6270 chr7 135877945 135878155 + 10.1 0.000 Intergenic Intergenic 99309 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding chr5-4462 chr5 6773530 6773740 + 10.1 0.000 Intergenic L1M4|LINE|L1 -22245 NR_146281 109729133 Hs.582455 NR_146281 ENSG00000251365 LINC02236 - long intergenic non-protein coding RNA 2236 ncRNA chr8-3859 chr8 34080298 34080508 + 10.1 0.000 Intergenic Intergenic -480297 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr1-6469 chr1 20300027 20300237 + 10.1 0.000 intron (NM_001039500, intron 1 of 21) MIR|SINE|MIR 9257 NM_001039500 127731 Hs.205178 NM_144623 ENSG00000158816 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding chr9-3586 chr9 77019219 77019429 + 10.1 0.000 promoter-TSS (NM_001013735) promoter-TSS (NM_001013735) -331 NM_001013735 442425 Hs.553843 NM_001013735 ENSG00000204612 FOXB2 bA159H20.4 forkhead box B2 protein-coding chr19-3575 chr19 47509529 47509739 + 10.1 0.000 intron (NM_003827, intron 1 of 10) intron (NM_003827, intron 1 of 10) 5429 NR_038457 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chrX-2922 chrX 152896259 152896469 + 10.1 0.000 Intergenic Intergenic -18078 NM_001178110 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr2-8590 chr2 138666986 138667196 + 10.1 0.000 Intergenic MLT2B1|LTR|ERVL 113299 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chrX-1598 chrX 94600048 94600258 + 10.1 0.000 Intergenic LTR66|LTR|ERVL 463073 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr14-1469 chr14 19167736 19167946 + 10.1 0.000 Intergenic Intergenic 41311 NR_160525 114004396 Hs.650463 NR_160525 LNCRNA-ATB - long noncoding RNA activated by TGF-beta ncRNA chr2-4464 chr2 230770962 230771172 + 10.1 0.000 intron (NM_001130850, intron 2 of 8) L1ME1|LINE|L1 57519 NM_001130849 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr6-3146 chr6 111011717 111011927 + 10.1 0.000 intron (NM_001289111, intron 6 of 8) intron (NM_001289111, intron 6 of 8) 29784 NM_032194 84154 Hs.372265 NM_032194 ENSG00000197498 RPF2 BXDC1|bA397G5.4 ribosome production factor 2 homolog protein-coding chr6-4501 chr6 37349641 37349851 + 10.1 0.000 Intergenic L1MC3|LINE|L1 -4237 NM_003958 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr13-1147 chr13 31887427 31887637 + 10.1 0.000 intron (NR_027062, intron 1 of 3) intron (NR_027062, intron 1 of 3) 40749 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr20-1923 chr20 7751381 7751591 + 10.1 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 188972 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr6-3214 chr6 136967998 136968208 + 10.1 0.000 Intergenic Intergenic 25128 NR_027994 100294720 Hs.520412 NR_027994 ENSG00000225391 NHEG1 - neuroblastoma highly expressed 1 ncRNA chr1-5124 chr1 153490693 153490903 + 10.1 0.000 Intergenic MIR|SINE|MIR -30147 NM_002963 6278 Hs.112408 NM_002963 ENSG00000143556 S100A7 PSOR1|S100A7c S100 calcium binding protein A7 protein-coding chr3-3079 chr3 134311408 134311618 + 10.1 0.000 Intergenic AluJb|SINE|Alu -2063 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr4-3082 chr4 149280512 149280722 + 10.1 0.000 Intergenic Intergenic 126322 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr2-8784 chr2 166343861 166344071 + 10.1 0.000 intron (NM_001365536, intron 1 of 26) intron (NM_001365536, intron 1 of 26) 31978 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr2-9287 chr2 221851576 221851786 + 10.1 0.000 Intergenic Intergenic -277479 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr5-4582 chr5 26742278 26742488 + 10.1 0.000 Intergenic Intergenic 296203 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr2-9240 chr2 218932878 218933088 + 10.1 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -2346 NR_110238 101928537 Hs.611129 NR_110238 ENSG00000228135 LINC01494 - long intergenic non-protein coding RNA 1494 ncRNA chr6-1521 chr6 22980604 22980814 + 10.1 0.000 Intergenic L1PA10|LINE|L1 -262785 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr6-3666 chr6 147456627 147456837 + 10.1 0.000 Intergenic Intergenic -51958 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr5-2860 chr5 78547798 78548008 + 10.1 0.000 intron (NM_005779, intron 3 of 4) intron (NM_005779, intron 3 of 4) 100869 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr6-4145 chr6 169102058 169102268 + 10.1 0.000 Intergenic HERVL-int|LTR|ERVL 34377 NR_134619 102724357 Hs.129310 NR_134619 ENSG00000234519 LOC102724357 - uncharacterized LOC102724357 ncRNA chr19-4810 chr19 35262142 35262352 + 10.1 0.000 intron (NM_205834, intron 4 of 9) intron (NM_205834, intron 4 of 9) -6715 NM_003367 7392 Hs.454534 NM_003367 ENSG00000105698 USF2 FIP|bHLHb12 upstream transcription factor 2, c-fos interacting protein-coding chr12-4111 chr12 62537705 62537915 + 10.1 0.000 intron (NM_001278469, intron 16 of 35) intron (NM_001278469, intron 16 of 35) 65624 NR_121682 283416 Hs.375881 NM_175895 ENSG00000221949 LINC01465 C12orf61 long intergenic non-protein coding RNA 1465 ncRNA chr1-4926 chr1 44219702 44219912 + 10.1 0.000 exon (NM_001034024, exon 9 of 11) exon (NM_001034024, exon 9 of 11) 6336 NM_001034024 55929 Hs.8008 NM_019100 ENSG00000178028 DMAP1 DNMAP1|DNMTAP1|EAF2|MEAF2|SWC4 DNA methyltransferase 1 associated protein 1 protein-coding chr11-9341 chr11 46614509 46614719 + 10.1 0.000 intron (NM_173811, intron 2 of 2) intron (NM_173811, intron 2 of 2) 2613 NM_173811 283254 Hs.714463 NM_173811 ENSG00000180423 HARBI1 C11orf77 harbinger transposase derived 1 protein-coding chr10-5564 chr10 88826736 88826946 + 10.1 0.000 intron (NM_144590, intron 3 of 5) L2b|LINE|L2 24111 NM_001128215 340654 Hs.55118 NM_001128215 ENSG00000173239 LIPM LIPL3|bA304I5.1 lipase family member M protein-coding chrX-3837 chrX 152255535 152255745 + 10.1 0.000 intron (NM_000808, intron 5 of 9) intron (NM_000808, intron 5 of 9) -117062 NM_001011543 4109 Hs.18048 NM_021048 ENSG00000124260 MAGEA10 CT1.10|MAGE10 MAGE family member A10 protein-coding chr11-6072 chr11 32927113 32927323 + 10.1 0.000 exon (NM_001076786, exon 2 of 13) exon (NM_001076786, exon 2 of 13) 34407 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr10-4396 chr10 51269895 51270105 + 10.1 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) -29573 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr22-2383 chr22 47184741 47184951 + 10.1 0.000 Intergenic L1MA1|LINE|L1 -160725 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr5-3159 chr5 69066824 69067034 + 10.1 0.000 Intergenic AluSz|SINE|Alu -27085 NM_022902 64924 Hs.631975 NM_022902 ENSG00000145740 SLC30A5 ZNT5|ZNTL1|ZTL1|ZnT-5 solute carrier family 30 member 5 protein-coding chrX-2140 chrX 33744396 33744606 + 10.1 0.000 Intergenic L1PA13|LINE|L1 387829 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr18-1396 chr18 60426101 60426311 + 10.1 0.000 Intergenic Intergenic -53431 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr15-4903 chr15 77072826 77073036 + 10.1 0.000 Intergenic MER5B|DNA|hAT-Charlie -1822 NM_001168412 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr7-6910 chr7 75616781 75616991 + 10.1 0.000 intron (NM_005338, intron 1 of 30) intron (NM_005338, intron 1 of 30) -88763 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr17-3253 chr17 30344605 30344815 + 10.1 0.000 Intergenic Intergenic -10653 NM_001319942 388364 Hs.371005 NM_206832 ENSG00000182271 TMIGD1 TMIGD|UNQ9372 transmembrane and immunoglobulin domain containing 1 protein-coding chr2-11493 chr2 235196138 235196348 + 10.1 0.000 Intergenic Intergenic 168508 NM_001371306 chr13-1888 chr13 40287969 40288179 + 10.1 0.000 Intergenic LTR82A|LTR|ERVL -67572 NR_033877 400123 Hs.577960 NR_033877 ENSG00000215483 LINC00548 - long intergenic non-protein coding RNA 548 ncRNA chrX-677 chrX 15853895 15854105 + 10.1 0.000 intron (NM_001368994, intron 1 of 4) intron (NM_001368994, intron 1 of 4) 813 NM_001368994 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr14-1934 chr14 22422751 22422961 + 10.1 0.000 intron (NR_148364, intron 1 of 1) intron (NR_148364, intron 1 of 1) 9897 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr16-3431 chr16 88133215 88133425 + 10.1 0.000 Intergenic Intergenic -32335 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr8-6852 chr8 99563445 99563655 + 10.1 0.000 intron (NM_017890, intron 31 of 61) intron (NM_017890, intron 31 of 61) -26689 NR_030596 100126309 NR_030596 ENSG00000216069 MIR875 MIRN875|hsa-mir-875 microRNA 875 ncRNA chr5-2420 chr5 115344056 115344266 + 10.1 0.000 Intergenic MER44C|DNA|TcMar-Tigger -47507 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr10-4683 chr10 132360962 132361172 + 10.1 0.000 intron (NM_001143757, intron 8 of 10) intron (NM_001143757, intron 8 of 10) 23727 NM_001309474 80313 Hs.119897 NM_030626 ENSG00000148814 LRRC27 - leucine rich repeat containing 27 protein-coding chr3-5311 chr3 127369406 127369616 + 10.1 0.000 intron (NR_110147, intron 1 of 4) intron (NR_110147, intron 1 of 4) 21159 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr10-3572 chr10 80378423 80378633 + 10.1 0.000 Intergenic Intergenic 21747 NM_032372 84332 Hs.741500 NM_032372 ENSG00000133665 DYDC2 - DPY30 domain containing 2 protein-coding chr14-2933 chr14 44166856 44167066 + 10.1 0.000 Intergenic Intergenic 340322 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr11-8315 chr11 75380605 75380815 + 10.1 0.000 Intergenic MIRb|SINE|MIR -18781 NM_001260507 6188 Hs.546286 NM_001005 ENSG00000149273 RPS3 S3 ribosomal protein S3 protein-coding chr10-5465 chr10 79282771 79282981 + 10.1 0.000 intron (NM_020338, intron 8 of 24) intron (NM_020338, intron 8 of 24) -64593 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr9-7668 chr9 69318750 69318960 + 10.1 0.000 Intergenic Intergenic -5717 NM_001127608 9413 Hs.118003 NM_004816 ENSG00000135063 FAM189A2 C9orf61|X123 family with sequence similarity 189 member A2 protein-coding chr9-4356 chr9 130944674 130944884 + 10.1 0.000 Intergenic LTR85c|LTR|Gypsy? -5532 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr17-4812 chr17 51172308 51172518 + 10.1 0.000 TTS (NR_037149) TTS (NR_037149) 5691 NM_001018138 4831 Hs.463456 NM_002512 ENSG00000243678 NME2 NDKB|NDPK-B|NDPKB|NM23-H2|NM23B|PUF NME/NM23 nucleoside diphosphate kinase 2 protein-coding chr3-5845 chr3 32729362 32729572 + 10.1 0.000 intron (NR_046352, intron 9 of 16) intron (NR_046352, intron 9 of 16) 33926 NM_001256742 25904 Hs.444851 NM_015442 ENSG00000182973 CNOT10 - CCR4-NOT transcription complex subunit 10 protein-coding chr11-5346 chr11 63072366 63072576 + 10.1 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -56626 NM_001184733 9376 Hs.266223 NM_004254 ENSG00000149452 SLC22A8 OAT3 solute carrier family 22 member 8 protein-coding chr8-1780 chr8 79893619 79893829 + 10.1 0.000 Intergenic Intergenic -21987 NR_110954 101927040 Hs.350876 NR_110954 ENSG00000249328 LOC101927040 - uncharacterized LOC101927040 ncRNA chr3-2961 chr3 66598214 66598424 + 10.1 0.000 Intergenic Intergenic -97898 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr11-3580 chr11 61686815 61687025 + 10.1 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 6529 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr21-703 chr21 30336726 30336936 + 10.1 0.000 TTS (NM_001077711) TTS (NM_001077711) 863 NM_001077711 643812 Hs.580881 NM_001077711 ENSG00000206107 KRTAP27-1 - keratin associated protein 27-1 protein-coding chr7-5370 chr7 31351386 31351596 + 10.1 0.000 Intergenic Intergenic -10765 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr15-4668 chr15 64891986 64892196 + 10.1 0.000 Intergenic MIR3|SINE|MIR -19811 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr3-2317 chr3 127781737 127781947 + 10.1 0.000 exon (NM_001256585, exon 3 of 7) exon (NM_001256585, exon 3 of 7) 41040 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr17-6520 chr17 31572490 31572700 + 10.1 0.000 Intergenic Intergenic -2674 NR_039878 100616449 NR_039878 ENSG00000265976 MIR4725 mir-4725 microRNA 4725 ncRNA chr1-7981 chr1 203839156 203839366 + 10.1 0.000 intron (NM_014827, intron 13 of 19) FLAM_A|SINE|Alu -22338 NR_130746 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding chrX-1076 chrX 136880289 136880499 + 10.1 0.000 intron (NM_001164803, intron 1 of 7) CpG 331 NM_001164803 27316 Hs.380118 NM_002139 ENSG00000147274 RBMX HNRNPG|HNRPG|MRXS11|RBMXP1|RBMXRT|RNMX|hnRNP-G RNA binding motif protein X-linked protein-coding chr2-12981 chr2 105351447 105351657 + 10.1 0.000 Intergenic L1MC3|LINE|L1 14012 NM_024093 79074 Hs.549577 NM_024093 ENSG00000135974 C2orf49 asw chromosome 2 open reading frame 49 protein-coding chr7-5233 chr7 16480636 16480846 + 10.1 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -15003 NM_015464 25928 Hs.648106 NM_015464 ENSG00000171243 SOSTDC1 CDA019|DAND7|ECTODIN|USAG1 sclerostin domain containing 1 protein-coding chr2-4230 chr2 218890979 218891189 + 10.1 0.000 intron (NM_025216, intron 3 of 3) MIR|SINE|MIR 10232 NM_025216 80326 Hs.121540 NM_025216 ENSG00000135925 WNT10A OODD|SSPS|STHAG4 Wnt family member 10A protein-coding chr6-2218 chr6 43506721 43506931 + 10.1 0.000 TTS (NM_001146018) TTS (NM_001146018) 3517 NM_001012974 221424 Hs.445552 NM_001012974 ENSG00000204052 LRRC73 C6orf154 leucine rich repeat containing 73 protein-coding chr8-4376 chr8 102478781 102478991 + 10.1 0.000 Intergenic Intergenic -66186 NM_015902 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr5-2316 chr5 58482932 58483142 + 10.1 0.000 Intergenic L2a|LINE|L2 -8398 NM_001304428 202309 Hs.547697 NM_152687 ENSG00000175857 GAPT C5orf29 GRB2 binding adaptor protein, transmembrane protein-coding chr6-3049 chr6 63584019 63584229 + 10.1 0.000 TTS (NM_003463) TTS (NM_003463) 12112 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr3-8584 chr3 157460372 157460582 + 10.1 0.000 intron (NM_024621, intron 3 of 13) L2c|LINE|L2 23627 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr15-3296 chr15 77954885 77955095 + 10.1 0.000 Intergenic AluSq2|SINE|Alu -10429 NR_157580 440292 NR_157580 LOC440292 - COMM domain containing 4 pseudogene pseudo chrX-427 chrX 42755930 42756140 + 10.1 0.000 Intergenic Intergenic 22128 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr11-8419 chr11 103258871 103259081 + 10.1 0.000 intron (NM_001377, intron 69 of 88) intron (NM_001377, intron 69 of 88) 149550 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr22-2814 chr22 43155391 43155601 + 10.1 0.000 intron (NM_001256530, intron 1 of 3) intron (NM_001256530, intron 1 of 3) 3561 NM_001256530 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr15-2508 chr15 37380296 37380506 + 10.1 0.000 Intergenic L1PA5|LINE|L1 -279090 NM_001220482 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr3-3767 chr3 10765771 10765981 + 10.1 0.000 Intergenic LTR16C|LTR|ERVL -1667 NR_027102 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA chr1-4325 chr1 44405539 44405749 + 10.1 0.000 intron (NM_018150, intron 1 of 14) CpG 389 NM_018150 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr4-4083 chr4 4288943 4289153 + 10.1 0.000 intron (NM_017816, intron 1 of 9) intron (NM_017816, intron 1 of 9) 973 NM_001145725 55646 Hs.425427 NM_017816 ENSG00000145220 LYAR ZC2HC2|ZLYAR Ly1 antibody reactive protein-coding chr5-5609 chr5 151896453 151896663 + 10.1 0.000 intron (NM_000171, intron 1 of 8) intron (NM_000171, intron 1 of 8) 28293 NM_000171 2741 Hs.121490 NM_000171 ENSG00000145888 GLRA1 HKPX1|STHE glycine receptor alpha 1 protein-coding chr11-5910 chr11 13869030 13869240 + 10.1 0.000 intron (NR_149109, intron 2 of 3) intron (NR_149109, intron 2 of 3) 1481 NR_149109 105376561 Hs.512244 NR_149109 ENSG00000254930 LINC02545 - long intergenic non-protein coding RNA 2545 ncRNA chr4-5548 chr4 129150526 129150736 + 10.1 0.000 Intergenic MER50|LTR|ERV1 54479 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr15-1946 chr15 25346001 25346211 + 10.1 0.000 intron (NM_001354542, intron 10 of 11) L1ME2|LINE|L1 67763 NR_001289 338429 NR_001289 ENSG00000239169 SNORD109B HBII-438B small nucleolar RNA, C/D box 109B snoRNA chr6-3302 chr6 159290749 159290959 + 10.1 0.000 Intergenic L1PA7|LINE|L1 -92677 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA chr8-3532 chr8 119496961 119497171 + 10.1 0.000 Intergenic MIR|SINE|MIR 80620 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr5-3470 chr5 170302621 170302831 + 10.1 0.000 Intergenic Intergenic -4949 NM_005565 3937 Hs.304475 NM_005565 ENSG00000043462 LCP2 SLP-76|SLP76 lymphocyte cytosolic protein 2 protein-coding chr6-3647 chr6 134031749 134031959 + 10.1 0.000 intron (NM_145176, intron 1 of 4) L2|LINE|L2 20770 NM_145176 154091 Hs.486508 NM_145176 ENSG00000146411 SLC2A12 GLUT12|GLUT8 solute carrier family 2 member 12 protein-coding chr1-8903 chr1 6165862 6166072 + 10.1 0.000 intron (NM_015557, intron 2 of 41) intron (NM_015557, intron 2 of 41) 14354 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr10-3748 chr10 120830237 120830447 + 10.1 0.000 intron (NR_033850, intron 1 of 2) intron (NR_033850, intron 1 of 2) 20837 NR_033850 283089 Hs.568750 NR_033850 ENSG00000227165 WDR11-AS1 - WDR11 antisense RNA 1 ncRNA chr6-3021 chr6 50272865 50273075 + 10.1 0.000 Intergenic MamRep605|LTR?|LTR? -223041 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding chr21-751 chr21 42302063 42302273 + 10.1 0.000 Intergenic Intergenic 13428 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chrX-1374 chrX 153250706 153250916 + 10.1 0.000 Intergenic Intergenic 70956 NM_001354980 105373377 NM_001354980 ENSG00000225110 PNMA6F PNMA6BL PNMA family member 6F protein-coding chr12-6244 chr12 40769917 40770127 + 10.1 0.000 intron (NM_001256063, intron 1 of 15) intron (NM_001256063, intron 1 of 15) -57916 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr10-4089 chr10 56884759 56884969 + 10.1 0.000 Intergenic Intergenic 419695 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr4-1653 chr4 109597517 109597727 + 10.1 0.000 intron (NM_017918, intron 1 of 7) SVA_D|Retroposon|SVA 37376 NM_017918 55013 Hs.234149 NM_017918 ENSG00000005059 MCUB CCDC109B mitochondrial calcium uniporter dominant negative beta subunit protein-coding chr2-8099 chr2 76261551 76261761 + 10.1 0.000 Intergenic Intergenic -550741 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr12-4926 chr12 68467965 68468175 + 10.1 0.000 Intergenic LTR78|LTR|ERV1 -16586 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr4-2555 chr4 81785276 81785486 + 10.1 0.000 Intergenic AluJb|SINE|Alu -313474 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr7-6283 chr7 137755968 137756178 + 10.1 0.000 intron (NM_001321708, intron 1 of 32) intron (NM_001321708, intron 1 of 32) 90259 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr17-3714 chr17 18123732 18123942 + 10.1 0.000 intron (NM_016239, intron 2 of 64) intron (NM_016239, intron 2 of 64) 15081 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr10-5230 chr10 64206229 64206439 + 10.1 0.000 Intergenic L2b|LINE|L2 -619194 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr2-9313 chr2 224102141 224102351 + 10.1 0.000 Intergenic L3|LINE|CR1 -62927 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr6-5915 chr6 53714259 53714469 + 10.1 0.000 Intergenic Intergenic -48608 NM_001003760 401265 Hs.131064 NM_001003760 ENSG00000124743 KLHL31 BKLHD6|KBTBD1|KLHL|bA345L23.2 kelch like family member 31 protein-coding chr3-2855 chr3 35536931 35537141 + 10.1 0.000 Intergenic Intergenic -102489 NM_001267616 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr2-8337 chr2 108714796 108715006 + 10.1 0.000 Intergenic PABL_A|LTR|ERV1 -4581 NM_006267 5903 Hs.199561 NM_006267 ENSG00000153201 RANBP2 ADANE|ANE1|IIAE3|NUP358|TRP1|TRP2 RAN binding protein 2 protein-coding chr1-10470 chr1 162156334 162156544 + 10.1 0.000 promoter-TSS (NR_039798) promoter-TSS (NR_039798) -668 NR_039798 100616386 NR_039798 ENSG00000266144 MIR4654 mir-4654 microRNA 4654 ncRNA chr8-3500 chr8 107943688 107943898 + 10.1 0.000 intron (NM_001282863, intron 4 of 4) intron (NM_001282863, intron 4 of 4) 138146 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr14-2586 chr14 50528061 50528271 + 10.1 0.000 intron (NM_198794, intron 2 of 31) intron (NM_198794, intron 2 of 31) 4403 NM_198794 11183 Hs.130491 NM_006575 ENSG00000012983 MAP4K5 GCKR|KHS|KHS1|MAPKKKK5 mitogen-activated protein kinase kinase kinase kinase 5 protein-coding chr22-1948 chr22 47789461 47789671 + 10.1 0.000 intron (NR_122046, intron 8 of 8) HAL1ME|LINE|L1 157892 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA chr19-2192 chr19 18017333 18017543 + 10.1 0.000 Intergenic Intergenic 9268 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr3-6497 chr3 112505262 112505472 + 10.1 0.000 Intergenic L1MC1|LINE|L1 -5895 NM_001085357 151888 Hs.445162 NM_181780 ENSG00000186265 BTLA BTLA1|CD272 B and T lymphocyte associated protein-coding chr15-2300 chr15 68934508 68934718 + 10.1 0.000 intron (NM_001184780, intron 1 of 15) intron (NM_001184780, intron 1 of 15) 4088 NM_001184780 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr17-4346 chr17 4664570 4664780 + 10.1 0.000 Intergenic Intergenic -22997 NM_001140 246 Hs.73809 NM_001140 ENSG00000161905 ALOX15 12-LOX|15-LOX|15-LOX-1|LOG15 arachidonate 15-lipoxygenase protein-coding chr11-5977 chr11 19055266 19055476 + 10.1 0.000 3' UTR (NM_001303615, exon 3 of 3) 3' UTR (NM_001303615, exon 3 of 3) 4646 NM_001303615 117194 Hs.350566 NM_054030 ENSG00000183695 MRGPRX2 MGRG3|MRGX2 MAS related GPR family member X2 protein-coding chr12-3761 chr12 49790105 49790315 + 10.1 0.000 TTS (NM_001368048) TTS (NM_001368048) 38203 NM_001368048 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L Cep169|FP1193|KIAA1602 NCK associated protein 5 like protein-coding chr19-3644 chr19 2338179 2338389 + 10.1 0.000 intron (NM_001077238, intron 3 of 14) intron (NM_001077238, intron 3 of 14) 9600 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr15-2297 chr15 67813157 67813367 + 10.1 0.000 Intergenic Intergenic -12247 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr16-4543 chr16 65068959 65069169 + 10.1 0.000 intron (NM_001330576, intron 1 of 11) intron (NM_001330576, intron 1 of 11) 52999 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr9-4104 chr9 131061945 131062155 + 10.1 0.000 intron (NM_006059, intron 13 of 27) AluJb|SINE|Alu -34426 NR_033701 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr5-6998 chr5 151886661 151886871 + 10.1 0.000 exon (NM_001146040, exon 3 of 9) exon (NM_001146040, exon 3 of 9) 38085 NM_000171 2741 Hs.121490 NM_000171 ENSG00000145888 GLRA1 HKPX1|STHE glycine receptor alpha 1 protein-coding chr10-3395 chr10 29356898 29357108 + 10.1 0.000 Intergenic LTR16|LTR|ERVL -52531 NR_110926 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr19-2753 chr19 40819634 40819844 + 10.1 0.000 Intergenic Intergenic -8639 NR_144551 171523 Hs.656713 NR_144551 ENSG00000233622 CYP2T1P CYP2T2P cytochrome P450 family 2 subfamily T member 1, pseudogene pseudo chr11-6912 chr11 107752997 107753207 + 10.1 0.000 Intergenic Intergenic -41046 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr2-8115 chr2 79253069 79253279 + 10.1 0.000 Intergenic Intergenic -93421 NM_138937 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding chr4-3220 chr4 40596151 40596361 + 10.1 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) 33608 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr9-4505 chr9 39082614 39082824 + 10.1 0.000 intron (NM_033655, intron 21 of 23) LTR40c|LTR|ERVL 205584 NM_033655 79937 Hs.128474 NM_033655 ENSG00000106714 CNTNAP3 CASPR3|CNTNAP3A contactin associated protein like 3 protein-coding chr16-1970 chr16 82067317 82067527 + 10.1 0.000 intron (NM_002153, intron 1 of 4) intron (NM_002153, intron 1 of 4) 32169 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chr19-1558 chr19 977373 977583 + 10.1 0.000 Intergenic Intergenic -6850 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr19-6799 chr19 41712378 41712588 + 10.1 0.000 intron (NM_001308398, intron 2 of 8) intron (NM_001308398, intron 2 of 8) 3857 NM_001291484 1048 Hs.709196 NM_004363 ENSG00000105388 CEACAM5 CD66e|CEA carcinoembryonic antigen related cell adhesion molecule 5 protein-coding chr1-2450 chr1 38221213 38221423 + 10.1 0.000 Intergenic Intergenic -6551 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA chr6-8236 chr6 137018214 137018424 + 10.1 0.000 intron (NM_001278724, intron 1 of 5) intron (NM_001278724, intron 1 of 5) -25088 NR_027994 100294720 Hs.520412 NR_027994 ENSG00000225391 NHEG1 - neuroblastoma highly expressed 1 ncRNA chr8-6125 chr8 28835185 28835395 + 10.1 0.000 intron (NR_026826, intron 4 of 14) intron (NR_026826, intron 4 of 14) 54625 NM_001172562 55756 Hs.162397 NM_018250 ENSG00000104299 INTS9 CPSF2L|INT9|RC74 integrator complex subunit 9 protein-coding chr2-11818 chr2 17595081 17595291 + 10.1 0.000 intron (NM_001366805, intron 2 of 2) intron (NM_001366805, intron 2 of 2) 54490 NM_003385 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr19-2519 chr19 16719694 16719904 + 10.1 0.000 promoter-TSS (NM_001290355) promoter-TSS (NM_001290355) -48 NM_001290355 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr5-6467 chr5 172629898 172630108 + 10.1 0.000 Intergenic L1ME4a|LINE|L1 -11260 NM_001308177 54492 Hs.91521 NM_001142651 ENSG00000214357 NEURL1B NEURL3|RNF67B|hNeur2|neur2 neuralized E3 ubiquitin protein ligase 1B protein-coding chr10-5066 chr10 43337005 43337215 + 10.1 0.000 Intergenic Intergenic -34526 NM_173160 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr3-6571 chr3 123445830 123446040 + 10.1 0.000 intron (NM_183357, intron 1 of 20) intron (NM_183357, intron 1 of 20) 2610 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr5-3151 chr5 67209145 67209355 + 10.1 0.000 Intergenic Intergenic -12451 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr20-1944 chr20 24262125 24262335 + 10.1 0.000 Intergenic LTR16C|LTR|ERVL 62463 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr17-8250 chr17 66381774 66381984 + 10.1 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 34975 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr2-14349 chr2 218478544 218478754 + 10.1 0.000 intron (NM_020935, intron 18 of 25) intron (NM_020935, intron 18 of 25) 59526 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding chr14-4223 chr14 97170278 97170488 + 10.1 0.000 Intergenic Intergenic 15526 NR_146554 105370648 NR_146554 ENSG00000259110 LINC02304 - long intergenic non-protein coding RNA 2304 ncRNA chr12-2456 chr12 54983738 54983948 + 10.1 0.000 intron (NM_001136030, intron 1 of 10) intron (NM_001136030, intron 1 of 10) 919 NM_001136030 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|ITPRID3|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr12-4517 chr12 24034583 24034793 + 10.1 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -83656 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr11-10629 chr11 125378038 125378248 + 10.1 0.000 intron (NM_022062, intron 5 of 12) intron (NM_022062, intron 5 of 12) -117071 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr2-6869 chr2 75877989 75878199 + 10.1 0.000 Intergenic HERV17-int|LTR|ERV1 -167179 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr3-5550 chr3 3797967 3798177 + 10.1 0.000 intron (NR_149025, intron 1 of 5) intron (NR_149025, intron 1 of 5) -1359 NM_001324189 57633 Hs.163244 NM_020873 ENSG00000175928 LRRN1 FIGLER3|NLRR-1 leucine rich repeat neuronal 1 protein-coding chr14-3596 chr14 37709623 37709833 + 10.1 0.000 intron (NM_001310135, intron 7 of 32) intron (NM_001310135, intron 7 of 32) -62655 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr5-1933 chr5 179153727 179153937 + 10.1 0.000 intron (NM_014244, intron 8 of 21) intron (NM_014244, intron 8 of 21) 93459 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr6-1937 chr6 97586674 97586884 + 10.1 0.000 intron (NR_110757, intron 1 of 4) intron (NR_110757, intron 1 of 4) 281193 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr5-4104 chr5 73338239 73338449 + 10.1 0.000 non-coding (NR_146627, exon 2 of 2) non-coding (NR_146627, exon 2 of 2) 438 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr4-5848 chr4 110793622 110793832 + 10.1 0.000 Intergenic Intergenic 66920 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr3-6556 chr3 121361160 121361370 + 10.1 0.000 intron (NM_001348343, intron 21 of 27) L1MA1|LINE|L1 184723 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chr1-14139 chr1 32006083 32006293 + 10.1 0.000 Intergenic L2a|LINE|L2 -7680 NR_073498 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr2-8650 chr2 146990129 146990339 + 10.1 0.000 Intergenic Intergenic 403177 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr6-4346 chr6 17905110 17905320 + 10.1 0.000 intron (NM_001105567, intron 2 of 36) MER30|DNA|hAT-Charlie 82420 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr2-2186 chr2 28991317 28991527 + 10.1 0.000 intron (NM_001321538, intron 1 of 18) intron (NM_001321538, intron 1 of 18) 10124 NM_199280 165186 Hs.525977 NM_199280 ENSG00000189350 TOGARAM2 FAM179A TOG array regulator of axonemal microtubules 2 protein-coding chr19-2472 chr19 2674953 2675163 + 10.1 0.000 intron (NM_052847, intron 1 of 4) intron (NM_052847, intron 1 of 4) 27636 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr11-7848 chr11 116472551 116472761 + 10.1 0.000 Intergenic MER39|LTR|ERV1 -166766 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA KI270736.1-3 KI270736.1 172814 173024 + 10.1 0.000 NA NA NA NA chr1-6630 chr1 43912722 43912932 + 10.1 0.000 intron (NM_001270461, intron 8 of 8) intron (NM_001270461, intron 8 of 8) -20493 NM_057090 9048 Hs.632404 NM_003976 ENSG00000117407 ARTN ART|ENOVIN|EVN|NBN artemin protein-coding chr3-5971 chr3 46915469 46915679 + 10.1 0.000 Intergenic L1ME3D|LINE|L1 33325 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr10-5250 chr10 66893247 66893457 + 10.1 0.000 TTS (NR_111911) TTS (NR_111911) -32684 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr1-12289 chr1 232639120 232639330 + 10.1 0.000 Intergenic Ricksha_a|DNA|MULE-MuDR -78846 NR_146922 105373199 Hs.254475 NR_146922 ENSG00000225919 LINC01745 - long intergenic non-protein coding RNA 1745 ncRNA chr7-5821 chr7 83709172 83709382 + 10.1 0.000 Intergenic MER61E|LTR|ERV1 -60138 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr21-1271 chr21 27246737 27246947 + 10.1 0.000 Intergenic MER44C|DNA|TcMar-Tigger -279754 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr2-9045 chr2 199335313 199335523 + 10.1 0.000 intron (NM_001172509, intron 7 of 10) intron (NM_001172509, intron 7 of 10) 122521 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr7-5680 chr7 66221534 66221744 + 10.1 0.000 intron (NM_003596, intron 1 of 5) L2b|LINE|L2 16305 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr21-1429 chr21 21473209 21473419 + 10.1 0.000 intron (NM_001352592, intron 15 of 18) (TA)n|Simple_repeat|Simple_repeat 264005 NR_038872 378828 Hs.551009 NR_038872 ENSG00000238265 LINC00317 C21orf117|NCRNA00317|PRED89 long intergenic non-protein coding RNA 317 ncRNA chr3-2352 chr3 151043360 151043570 + 10.1 0.000 intron (NR_024066, intron 1 of 5) HAL1|LINE|L1 -43333 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr19-2637 chr19 5228780 5228990 + 10.1 0.000 intron (NM_130854, intron 12 of 32) intron (NM_130854, intron 12 of 32) 111927 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr12-2534 chr12 99387048 99387258 + 10.1 0.000 intron (NM_152788, intron 12 of 25) L2b|LINE|L2 -232063 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr1-6581 chr1 35320212 35320422 + 10.1 0.000 intron (NM_001350140, intron 2 of 27) MER21C|LTR|ERVL 45760 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr1-6178 chr1 201740221 201740431 + 10.1 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 426 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr8-3044 chr8 142385231 142385441 + 10.1 0.000 intron (NM_001366903, intron 1 of 9) L1M7|LINE|L1 17846 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr10-6143 chr10 133372099 133372309 + 10.1 0.000 promoter-TSS (NR_037509) promoter-TSS (NR_037509) -541 NR_037509 100500911 NR_037509 ENSG00000265395 MIR3944 - microRNA 3944 ncRNA chr15-2786 chr15 34470965 34471175 + 10.1 0.000 Intergenic Intergenic -33262 NR_027409 23015 Hs.182982 NM_181077 ENSG00000175265 GOLGA8A GM88|GOLGA8B golgin A8 family member A protein-coding chr8-2235 chr8 28689735 28689945 + 10.1 0.000 Intergenic Intergenic 11624 NR_126027 101929402 Hs.667366 NR_126027 ENSG00000246339 EXTL3-AS1 C8orf50 EXTL3 antisense RNA 1 ncRNA chr17-3899 chr17 50708685 50708895 + 10.1 0.000 promoter-TSS (NM_052855) promoter-TSS (NM_052855) -876 NM_052855 91369 Hs.463426 NM_052855 ENSG00000154945 ANKRD40 - ankyrin repeat domain 40 protein-coding chrX-363 chrX 153488527 153488737 + 10.1 0.000 intron (NR_073156, intron 1 of 12) intron (NR_073156, intron 1 of 12) -6348 NM_001711 633 Hs.821 NM_001711 ENSG00000182492 BGN DSPG1|MRLS|PG-S1|PGI|SEMDX|SLRR1A biglycan protein-coding chr4-3726 chr4 74449696 74449906 + 10.1 0.000 intron (NM_001657, intron 3 of 5) MER58C|DNA|hAT-Charlie 4665 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr15-4714 chr15 67139781 67139991 + 10.1 0.000 intron (NM_001145103, intron 1 of 8) AluSp|SINE|Alu 1865 NM_001145103 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr4-7474 chr4 71453793 71454003 + 10.1 0.000 intron (NM_003759, intron 9 of 22) intron (NM_003759, intron 9 of 22) 114845 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr16-2666 chr16 67150559 67150769 + 10.1 0.000 5' UTR (NM_033309, exon 2 of 2) 5' UTR (NM_033309, exon 2 of 2) 334 NM_033309 84752 Hs.744158 NM_033309 ENSG00000237172 B3GNT9 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 protein-coding chr2-4828 chr2 64405926 64406136 + 10.1 0.000 Intergenic Intergenic -48131 NM_014181 29094 Hs.372208 NM_014181 ENSG00000119862 LGALSL GRP|HSPC159 galectin like protein-coding chr3-3586 chr3 58041881 58042091 + 10.1 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 33564 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr5-2443 chr5 131012666 131012876 + 10.1 0.000 Intergenic L1MA3|LINE|L1 152485 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chrX-2559 chrX 101042299 101042509 + 10.1 0.000 intron (NM_001167972, intron 1 of 12) intron (NM_001167972, intron 1 of 12) 9707 NM_024917 79979 Hs.496501 NM_024917 ENSG00000188917 TRMT2B CXorf34|dJ341D10.3 tRNA methyltransferase 2 homolog B protein-coding chr3-7238 chr3 194998549 194998759 + 10.1 0.000 Intergenic L1ME3Cz|LINE|L1 -95934 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr17-2681 chr17 42299322 42299532 + 10.1 0.000 intron (NM_001288718, intron 5 of 18) MIR|SINE|MIR 11371 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr21-1599 chr21 16547840 16548050 + 10.1 0.000 intron (NR_136547, intron 2 of 2) MER3|DNA|hAT-Charlie 8117 NR_029480 406885 NR_029480 ENSG00000199030 MIRLET7C LET7C|MIRNLET7C|hsa-let-7c|let-7c microRNA let-7c ncRNA chr13-1543 chr13 29204939 29205149 + 10.1 0.000 intron (NM_001033602, intron 3 of 13) intron (NM_001033602, intron 3 of 13) 180587 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr3-5759 chr3 22442850 22443060 + 10.1 0.000 Intergenic MIR|SINE|MIR 485816 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr17-2922 chr17 47239988 47240198 + 10.1 0.000 Intergenic Intergenic -13749 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chr2-1776 chr2 203783808 203784018 + 10.1 0.000 Intergenic Intergenic 77274 NM_001243077 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr19-3216 chr19 55362752 55362962 + 10.1 0.000 intron (NM_001145402, intron 1 of 10) intron (NM_001145402, intron 1 of 10) 403 NM_001145402 284418 Hs.528319 NM_001145402 ENSG00000180043 FAM71E2 C19orf16 family with sequence similarity 71 member E2 protein-coding chrX-3326 chrX 127336638 127336848 + 10.1 0.000 Intergenic L1MA3|LINE|L1 517014 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr17-5704 chr17 55395400 55395610 + 10.1 0.000 intron (NM_012329, intron 6 of 6) intron (NM_012329, intron 6 of 6) 26330 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr2-9457 chr2 234795875 234796085 + 10.1 0.000 Intergenic Intergenic 113312 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr7-3756 chr7 76281039 76281249 + 10.1 0.000 intron (NM_001110199, intron 11 of 14) (CT)n|Simple_repeat|Simple_repeat -21529 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr3-10847 chr3 166211952 166212162 + 10.1 0.000 Intergenic Intergenic -374634 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr10-6050 chr10 127940372 127940582 + 10.1 0.000 intron (NM_001323356, intron 1 of 19) intron (NM_001323356, intron 1 of 19) 33374 NM_001316676 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr20-793 chr20 62371586 62371796 + 10.1 0.000 Intergenic Intergenic -4379 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr8-1261 chr8 140867620 140867830 + 10.1 0.000 intron (NM_001352737, intron 3 of 32) L1PA15|LINE|L1 133279 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chrX-520 chrX 24169600 24169810 + 10.1 0.000 intron (NM_001178085, intron 4 of 10) intron (NM_001178085, intron 4 of 10) 19976 NM_001178084 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr3-6699 chr3 132824976 132825186 + 10.1 0.000 intron (NR_002811, intron 8 of 10) MLT1O|LTR|ERVL-MaLR -102622 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr20-2350 chr20 14434879 14435089 + 10.1 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) -97317 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr9-4415 chr9 3068441 3068651 + 10.1 0.000 Intergenic Intergenic -113043 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr20-3097 chr20 25145297 25145507 + 10.1 0.000 intron (NR_027092, intron 1 of 3) intron (NR_027092, intron 1 of 3) 2591 NR_027093 284798 Hs.334934 NR_027091 ENSG00000230725 LOC284798 - uncharacterized LOC284798 ncRNA chr16-3170 chr16 81809161 81809371 + 10.1 0.000 intron (NM_002661, intron 2 of 32) LTR16C|LTR|ERVL 29975 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr15-2962 chr15 49848160 49848370 + 10.1 0.000 Intergenic Intergenic 227217 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr2-8000 chr2 67561486 67561696 + 10.1 0.000 Intergenic Intergenic 164258 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr8-1810 chr8 117862172 117862382 + 10.1 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 58636 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr19-3329 chr19 5913373 5913583 + 10.1 0.000 promoter-TSS (NM_080590) promoter-TSS (NM_080590) -776 NM_080590 828 Hs.584744 NM_004058 ENSG00000105519 CAPS CAPS1 calcyphosine protein-coding chr17-5280 chr17 20773267 20773477 + 10.1 0.000 Intergenic LOR1b|LTR|ERV1 60926 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr1-6696 chr1 53909960 53910170 + 10.1 0.000 non-coding (NR_136693, exon 5 of 5) non-coding (NR_136693, exon 5 of 5) 15878 NR_136693 1733 Hs.251415 NM_000792 ENSG00000211452 DIO1 5DI|TXDI1 iodothyronine deiodinase 1 protein-coding chr16-1435 chr16 58480892 58481102 + 10.1 0.000 intron (NM_022910, intron 1 of 15) AluSx1|SINE|Alu 16175 NM_022910 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr8-1292 chr8 61759720 61759930 + 10.1 0.000 Intergenic LTR16E1|LTR|ERVL 45037 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr1-9548 chr1 40380134 40380344 + 10.1 0.000 intron (NM_001198978, intron 1 of 9) intron (NM_001198978, intron 1 of 9) 5606 NM_001198978 64744 Hs.15200 NM_022733 ENSG00000084070 SMAP2 SMAP1L small ArfGAP2 protein-coding chr5-4109 chr5 74311141 74311351 + 10.1 0.000 Intergenic Intergenic -2921 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr12-3494 chr12 124053233 124053443 + 10.1 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 80123 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr10-2202 chr10 33248642 33248852 + 10.1 0.000 intron (NM_001244973, intron 6 of 16) intron (NM_001244973, intron 6 of 16) 85920 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr6-5415 chr6 156055999 156056209 + 10.1 0.000 Intergenic L1MB8|LINE|L1 109307 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr9-3008 chr9 98210260 98210470 + 10.1 0.000 intron (NR_051978, intron 7 of 11) intron (NR_051978, intron 7 of 11) 3186 NM_001267572 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr4-5068 chr4 144376459 144376669 + 10.1 0.000 Intergenic Intergenic -235846 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr6-4268 chr6 10892525 10892735 + 10.1 0.000 intron (NM_001040274, intron 2 of 29) intron (NM_001040274, intron 2 of 29) 5578 NM_001040274 221711 Hs.729128 NM_194299 ENSG00000153157 SYCP2L C6orf177|NO145|dJ62D2.1 synaptonemal complex protein 2 like protein-coding chrX-1806 chrX 88719774 88719984 + 10.1 0.000 Intergenic L1M5|LINE|L1 -27346 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr15-2992 chr15 53783581 53783791 + 10.1 0.000 Intergenic L2|LINE|L2 -20808 NR_102334 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr2-2683 chr2 246696 246906 + 10.1 0.000 intron (NM_001282682, intron 4 of 10) intron (NM_001282682, intron 4 of 10) 9539 NM_001282687 26751 Hs.515951 NM_015677 ENSG00000035115 SH3YL1 RAY SH3 and SYLF domain containing 1 protein-coding chr7-4918 chr7 131182573 131182783 + 10.1 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 72584 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr5-5464 chr5 139075146 139075356 + 10.1 0.000 intron (NM_022464, intron 3 of 9) intron (NM_022464, intron 3 of 9) 123117 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr15-1958 chr15 35072295 35072505 + 10.1 0.000 Intergenic L1MD2|LINE|L1 13008 NM_001355281 388112 Hs.635882 NM_001355281 ENSG00000255192 NANOGP8 NANOGP1|PN8 Nanog homeobox retrogene P8 protein-coding chr6-2438 chr6 166589137 166589347 + 10.1 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 38009 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr14-2976 chr14 51070815 51071025 + 10.1 0.000 intron (NM_015163, intron 1 of 9) intron (NM_015163, intron 1 of 9) 24784 NM_015163 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr9-5882 chr9 131550412 131550622 + 10.1 0.000 intron (NM_001365666, intron 1 of 3) HERVH-int|LTR|ERV1 4994 NM_001365666 642515 NM_001365666 ENSG00000283526 PRRT1B DSPD2|IFITMD8 proline rich transmembrane protein 1B protein-coding chr21-687 chr21 19954426 19954636 + 10.1 0.000 Intergenic Intergenic -54776 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr9-2074 chr9 69924260 69924470 + 10.1 0.000 Intergenic L1MB8|LINE|L1 103548 NM_001308086 138255 Hs.444459 NM_001010940 ENSG00000204711 C9orf135 - chromosome 9 open reading frame 135 protein-coding chr19-4529 chr19 8441891 8442101 + 10.1 0.000 Intergenic L2a|LINE|L2 -2979 NM_005968 4670 Hs.465808 NM_005968 ENSG00000099783 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding chr22-2332 chr22 41062156 41062366 + 10.1 0.000 Intergenic Intergenic 11460 NR_132979 106635682 NR_132979 SNORD140 - small nucleolar RNA, C/D box 140 snoRNA chr20-1345 chr20 16761346 16761556 + 10.1 0.000 Intergenic Intergenic 13098 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr14-2633 chr14 65251183 65251393 + 10.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL -28941 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr5-2014 chr5 34499123 34499333 + 10.0 0.000 Intergenic THE1D|LTR|ERVL-MaLR -157100 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chrX-3366 chrX 145609930 145610140 + 10.0 0.000 Intergenic Intergenic -207794 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr10-1357 chr10 117375659 117375869 + 10.0 0.000 promoter-TSS (NM_173791) promoter-TSS (NM_173791) -324 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr6-3313 chr6 165910280 165910490 + 10.0 0.000 Intergenic Intergenic -77166 NR_027284 441177 Hs.708964 NM_001013720 ENSG00000281832 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA chr13-778 chr13 34867811 34868021 + 10.0 0.000 Intergenic MIRb|SINE|MIR -74371 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr5-3430 chr5 151657245 151657455 + 10.0 0.000 Intergenic L2a|LINE|L2 -19595 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr16-3669 chr16 89420089 89420299 + 10.0 0.000 intron (NR_045839, intron 1 of 9) intron (NR_045839, intron 1 of 9) -10724 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr16-3190 chr16 84478736 84478946 + 10.0 0.000 3' UTR (NM_020947, exon 8 of 8) 3' UTR (NM_020947, exon 8 of 8) -11480 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr1-4375 chr1 154374163 154374373 + 10.0 0.000 Intergenic AluSq2|SINE|Alu -30925 NM_001206866 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr18-3422 chr18 63567281 63567491 + 10.0 0.000 3' UTR (NM_080474, exon 7 of 7) 3' UTR (NM_080474, exon 7 of 7) 11226 NM_080474 89777 Hs.348541 NM_080474 ENSG00000166634 SERPINB12 YUKOPIN serpin family B member 12 protein-coding chr5-7069 chr5 172267408 172267618 + 10.0 0.000 intron (NM_152277, intron 1 of 2) Charlie15b|DNA|hAT-Charlie 16251 NM_152277 92181 Hs.131570 NM_152277 ENSG00000168246 UBTD2 DCUBP ubiquitin domain containing 2 protein-coding chr8-2608 chr8 57753312 57753522 + 10.0 0.000 Intergenic L1MEh|LINE|L1 7268 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr5-2568 chr5 35061407 35061617 + 10.0 0.000 3' UTR (NM_000949, exon 10 of 10) 3' UTR (NM_000949, exon 10 of 10) -13563 NM_031900 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr13-1126 chr13 25882002 25882212 + 10.0 0.000 intron (NM_016529, intron 33 of 36) intron (NM_016529, intron 33 of 36) 168953 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr17-5764 chr17 60787493 60787703 + 10.0 0.000 intron (NM_001330413, intron 6 of 25) L2a|LINE|L2 109747 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr2-5471 chr2 128691846 128692056 + 10.0 0.000 Intergenic Intergenic -172649 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr6-2433 chr6 160882856 160883066 + 10.0 0.000 Intergenic Intergenic -108766 NM_001291958 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr22-2384 chr22 47941424 47941634 + 10.0 0.000 Intergenic Intergenic 309855 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA chr1-1453 chr1 1420084 1420294 + 10.0 0.000 exon (NM_001145210, exon 3 of 4) exon (NM_001145210, exon 3 of 4) 1087 NM_001243535 441869 Hs.381222 NM_001145210 ENSG00000235098 ANKRD65 - ankyrin repeat domain 65 protein-coding chr1-7182 chr1 211323548 211323758 + 10.0 0.000 Intergenic Intergenic -2962 NM_004619 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr9-2066 chr9 36327989 36328199 + 10.0 0.000 Intergenic Intergenic -51038 NM_001190388 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding chr16-3145 chr16 74786345 74786555 + 10.0 0.000 Intergenic Intergenic -11630 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr15-1226 chr15 65401415 65401625 + 10.0 0.000 intron (NM_020962, intron 4 of 19) intron (NM_020962, intron 4 of 19) 21427 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr9-6622 chr9 130352532 130352742 + 10.0 0.000 intron (NM_001291815, intron 30 of 97) MIR3|SINE|MIR 86877 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr9-2895 chr9 133626624 133626834 + 10.0 0.000 Intergenic MSTA|LTR|ERVL-MaLR -9634 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr6-2600 chr6 107698205 107698415 + 10.0 0.000 Intergenic Intergenic 33840 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr13-4246 chr13 96674152 96674362 + 10.0 0.000 intron (NM_153456, intron 1 of 1) MSTA|LTR|ERVL-MaLR 247028 NR_039723 100616137 NR_039723 ENSG00000283487 MIR4501 - microRNA 4501 ncRNA chr9-2542 chr9 128175284 128175494 + 10.0 0.000 intron (NM_001131016, intron 11 of 16) intron (NM_001131016, intron 11 of 16) 15124 NM_024112 79095 Hs.522412 NM_024112 ENSG00000171159 C9orf16 EST00098 chromosome 9 open reading frame 16 protein-coding chr19-6466 chr19 17122008 17122218 + 10.0 0.000 intron (NM_001130065, intron 2 of 39) Tigger18a|DNA|TcMar-Tigger 29878 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chr21-1101 chr21 34636627 34636837 + 10.0 0.000 Intergenic LTR108d_Mam|LTR|ERVL -21619 NM_004414 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr17-5804 chr17 64212137 64212347 + 10.0 0.000 intron (NM_018469, intron 2 of 11) intron (NM_018469, intron 2 of 11) 18492 NM_001288733 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr19-3297 chr19 4262040 4262250 + 10.0 0.000 intron (NM_018074, intron 6 of 7) intron (NM_018074, intron 6 of 7) 15065 NM_018074 55702 Hs.21811 NM_018074 ENSG00000105248 YJU2 CCDC94 YJU2 splicing factor homolog protein-coding chr3-7489 chr3 151264687 151264897 + 10.0 0.000 intron (NM_014879, intron 1 of 2) L2b|LINE|L2 13750 NM_014879 9934 Hs.2465 NM_014879 ENSG00000174944 P2RY14 BPR105|GPR105|P2Y14 purinergic receptor P2Y14 protein-coding chr11-3150 chr11 57698810 57699020 + 10.0 0.000 exon (NM_015457, exon 11 of 12) exon (NM_015457, exon 11 of 12) 13300 NR_157587 219541 Hs.43619 NM_153450 ENSG00000156603 MED19 DT2P1G7|LCMR1|MED19AS mediator complex subunit 19 protein-coding chr2-4534 chr2 39631798 39632008 + 10.0 0.000 Intergenic Intergenic -33595 NM_001167959 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr21-371 chr21 10639949 10640159 + 10.0 0.000 Intergenic Intergenic 118540 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chrX-1708 chrX 19130196 19130406 + 10.0 0.000 Intergenic AluSq2|SINE|Alu -7664 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr2-11052 chr2 113024270 113024480 + 10.0 0.000 intron (NM_014438, intron 5 of 5) intron (NM_014438, intron 5 of 5) 18916 NM_014440 27179 Hs.278910 NM_014440 ENSG00000136694 IL36A FIL1|FIL1(EPSILON)|FIL1E|IL-1F6|IL1(EPSILON)|IL1F6 interleukin 36 alpha protein-coding chr1-14853 chr1 77622848 77623058 + 10.0 0.000 intron (NM_001308237, intron 4 of 13) intron (NM_001308237, intron 4 of 13) 59705 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr2-9316 chr2 224492945 224493155 + 10.0 0.000 intron (NM_001257197, intron 12 of 14) MLT1F|LTR|ERVL-MaLR 76905 NM_001257198 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr7-6991 chr7 112606568 112606778 + 10.0 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -11392 NR_110160 100996249 Hs.561749 NR_110159 LOC100996249 - uncharacterized LOC100996249 ncRNA chr1-7055 chr1 180185734 180185944 + 10.0 0.000 intron (NM_002826, intron 7 of 11) MIRb|SINE|MIR 30970 NM_002826 5768 Hs.719176 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr2-6696 chr2 24908810 24909020 + 10.0 0.000 intron (NM_001320613, intron 2 of 21) L2|LINE|L2 11322 NM_001320613 109 Hs.467898 NM_004036 ENSG00000138031 ADCY3 AC-III|AC3|BMIQ19 adenylate cyclase 3 protein-coding chr6-1753 chr6 53679495 53679705 + 10.0 0.000 Intergenic Intergenic -13844 NM_001003760 401265 Hs.131064 NM_001003760 ENSG00000124743 KLHL31 BKLHD6|KBTBD1|KLHL|bA345L23.2 kelch like family member 31 protein-coding chr10-3069 chr10 2495143 2495353 + 10.0 0.000 intron (NR_136146, intron 1 of 2) intron (NR_136146, intron 1 of 2) 6214 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr4-8173 chr4 130546356 130546566 + 10.0 0.000 Intergenic Intergenic 170100 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chrX-1361 chrX 148219184 148219394 + 10.0 0.000 Intergenic L3|LINE|CR1 237952 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr4-3091 chr4 152151977 152152187 + 10.0 0.000 Intergenic Intergenic 51264 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr17-5780 chr17 62384570 62384780 + 10.0 0.000 intron (NM_001144933, intron 4 of 11) intron (NM_001144933, intron 4 of 11) 4122 NM_173503 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding chr19-1965 chr19 55624113 55624323 + 10.0 0.000 intron (NM_203374, intron 1 of 1) intron (NM_203374, intron 1 of 1) 357 NM_203374 147808 Hs.53996 NM_203374 ENSG00000179922 ZNF784 - zinc finger protein 784 protein-coding chr2-2600 chr2 10707212 10707422 + 10.0 0.000 Intergenic Intergenic -14313 NM_144583 245973 Hs.580464 NM_144583 ENSG00000143882 ATP6V1C2 ATP6C2|VMA5 ATPase H+ transporting V1 subunit C2 protein-coding chr14-2616 chr14 60420133 60420343 + 10.0 0.000 Intergenic MLT2B1|LTR|ERVL 65825 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding chrX-1281 chrX 110735011 110735221 + 10.0 0.000 intron (NR_159734, intron 4 of 12) intron (NR_159734, intron 4 of 12) 60701 NM_001143983 91851 Hs.496587 NM_145234 ENSG00000101938 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin like 1 protein-coding chr7-4552 chr7 4813424 4813634 + 10.0 0.000 intron (NM_018059, intron 9 of 14) L1MEg1|LINE|L1 23921 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr17-7361 chr17 7041712 7041922 + 10.0 0.000 exon (NM_153357, exon 4 of 4) exon (NM_153357, exon 4 of 4) 2100 NM_153357 162515 Hs.336564 NM_153357 ENSG00000174326 SLC16A11 MCT 11|MCT11 solute carrier family 16 member 11 protein-coding chr6-2816 chr6 157045869 157046079 + 10.0 0.000 intron (NM_001363725, intron 2 of 17) intron (NM_001363725, intron 2 of 17) 9547 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr4-2144 chr4 78776934 78777144 + 10.0 0.000 intron (NM_017593, intron 1 of 13) intron (NM_017593, intron 1 of 13) 661 NM_198892 55589 Hs.146551 NM_017593 ENSG00000138756 BMP2K BIKE|HRIHFB2017 BMP2 inducible kinase protein-coding chr6-4353 chr6 19032462 19032672 + 10.0 0.000 Intergenic LTR78B|LTR|ERV1 147913 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr2-12955 chr2 102704588 102704798 + 10.0 0.000 intron (NM_003048, intron 10 of 11) intron (NM_003048, intron 10 of 11) 32195 NR_136173 84804 Hs.590898 NM_032718 ENSG00000135953 MFSD9 - major facilitator superfamily domain containing 9 protein-coding chr2-4284 chr2 232274326 232274536 + 10.0 0.000 intron (NR_046477, intron 12 of 18) intron (NR_046477, intron 12 of 18) 101778 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr2-8002 chr2 68230589 68230799 + 10.0 0.000 intron (NM_000945, intron 1 of 5) L1MDa|LINE|L1 21838 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr9-3479 chr9 12784588 12784798 + 10.0 0.000 intron (NM_203403, intron 1 of 1) L1MA3|LINE|L1 9673 NM_203403 286343 Hs.445356 NM_203403 ENSG00000153714 LURAP1L C9orf150|HYST0841|LRAP35b|bA3L8.2 leucine rich adaptor protein 1 like protein-coding chr5-6844 chr5 116208765 116208975 + 10.0 0.000 intron (NM_001308080, intron 5 of 6) intron (NM_001308080, intron 5 of 6) -46873 NR_162144 113219464 NR_162144 MIR12130 - microRNA 12130 ncRNA chr3-2107 chr3 47164643 47164853 + 10.0 0.000 promoter-TSS (NM_001349370) promoter-TSS (NM_001349370) 378 NR_033373 285352 Hs.570631 NR_033373 KIF9-AS1 - KIF9 antisense RNA 1 ncRNA chr6-3596 chr6 85799251 85799461 + 10.0 0.000 Intergenic L2c|LINE|L2 -120623 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr6-6332 chr6 51580530 51580740 + 10.0 0.000 Intergenic L2c|LINE|L2 -41235 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr17-4958 chr17 79146731 79146941 + 10.0 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 71899 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr6-3000 chr6 44073123 44073333 + 10.0 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 1424 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr22-2412 chr22 17986562 17986772 + 10.0 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) -5706 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chr11-3472 chr11 76301321 76301531 + 10.0 0.000 Intergenic L3b|LINE|CR1 79539 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr10-3403 chr10 30496495 30496705 + 10.0 0.000 Intergenic Intergenic 61954 NM_001320961 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding chrX-5269 chrX 139549052 139549262 + 10.0 0.000 intron (NM_000133, intron 5 of 7) intron (NM_000133, intron 5 of 7) 18421 NM_000133 2158 Hs.522798 NM_000133 ENSG00000101981 F9 F9 p22|FIX|HEMB|P19|PTC|THPH8 coagulation factor IX protein-coding chr7-3764 chr7 79217498 79217708 + 10.0 0.000 intron (NM_001301128, intron 1 of 20) MIR|SINE|MIR 208615 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr19-4538 chr19 9282436 9282646 + 10.0 0.000 Intergenic LTR12C|LTR|ERV1 27297 NM_198535 374879 Hs.633842 NM_198535 ENSG00000196110 ZNF699 hang zinc finger protein 699 protein-coding chr9-2651 chr9 34578263 34578473 + 10.0 0.000 intron (NM_001842, intron 1 of 8) intron (NM_001842, intron 1 of 8) 10356 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr4-6668 chr4 2490901 2491111 + 10.0 0.000 intron (NM_002938, intron 2 of 7) AluJo|SINE|Alu 21553 NM_001185009 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr10-4245 chr10 132113218 132113428 + 10.0 0.000 intron (NM_001323086, intron 2 of 23) intron (NM_001323086, intron 2 of 23) 47377 NM_001323087 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr2-7640 chr2 27477958 27478168 + 10.0 0.000 exon (NM_015662, exon 11 of 48) exon (NM_015662, exon 11 of 48) 11680 NM_015662 26160 Hs.127401 NM_015662 ENSG00000138002 IFT172 BBS20|NPHP17|RP71|SLB|SRTD10|osm-1|wim intraflagellar transport 172 protein-coding chr1-8025 chr1 228358284 228358494 + 10.0 0.000 intron (NM_052843, intron 80 of 80) intron (NM_052843, intron 80 of 80) 38720 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr7-3438 chr7 318794 319004 + 10.0 0.000 Intergenic Intergenic -60526 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr22-2555 chr22 26601856 26602066 + 10.0 0.000 exon (NM_001887, exon 5 of 6) exon (NM_001887, exon 5 of 6) -11829 NM_003595 8459 Hs.632768 NM_003595 ENSG00000128294 TPST2 TANGO13B|TPST-2 tyrosylprotein sulfotransferase 2 protein-coding chr5-4040 chr5 39364180 39364390 + 10.0 0.000 intron (NM_001737, intron 1 of 10) intron (NM_001737, intron 1 of 10) 210 NM_001737 735 Hs.654443 NM_001737 ENSG00000113600 C9 ARMD15|C9D complement C9 protein-coding chr2-6435 chr2 150532385 150532595 + 10.0 0.000 Intergenic Intergenic 39731 NR_110241 101929260 Hs.732324 NR_110241 ENSG00000236049 LINC01920 - long intergenic non-protein coding RNA 1920 ncRNA chr4-2672 chr4 1064955 1065165 + 10.0 0.000 intron (NM_001366918, intron 9 of 10) L1MB3|LINE|L1 48504 NM_194439 285498 Hs.248290 NM_194439 ENSG00000178222 RNF212 ZHP3 ring finger protein 212 protein-coding chr8-7141 chr8 121385001 121385211 + 10.0 0.000 Intergenic Intergenic -254240 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr6-5381 chr6 151569319 151569529 + 10.0 0.000 intron (NM_025059, intron 5 of 10) intron (NM_025059, intron 5 of 10) 75407 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chr9-8190 chr9 107547405 107547615 + 10.0 0.000 Intergenic MamRep605|LTR?|LTR? -57741 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr10-6840 chr10 22805354 22805564 + 10.0 0.000 Intergenic Intergenic -90881 NM_005028 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr10-5688 chr10 99938822 99939032 + 10.0 0.000 intron (NR_024130, intron 2 of 4) intron (NR_024130, intron 2 of 4) -8020 NM_001318326 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr20-1051 chr20 2696693 2696903 + 10.0 0.000 intron (NM_001110514, intron 2 of 17) intron (NM_001110514, intron 2 of 17) 3920 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr20-3219 chr20 58131898 58132108 + 10.0 0.000 Intergenic Intergenic -18899 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr2-7225 chr2 219620603 219620813 + 10.0 0.000 Intergenic Intergenic -6862 NM_201574 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr4-7390 chr4 61893377 61893587 + 10.0 0.000 intron (NM_001371343, intron 10 of 23) intron (NM_001371343, intron 10 of 23) 268283 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr9-5642 chr9 121259969 121260179 + 10.0 0.000 intron (NM_001353054, intron 7 of 25) intron (NM_001353054, intron 7 of 25) -8088 NM_001353059 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr12-5001 chr12 79681295 79681505 + 10.0 0.000 intron (NM_001354732, intron 2 of 6) AluJo|SINE|Alu 9180 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding GL000214.1-4 GL000214.1 104648 104858 + 10.0 0.000 NA NA NA NA chr11-4659 chr11 47189520 47189730 + 10.0 0.000 Intergenic L2c|LINE|L2 -3191 NM_016223 29763 Hs.334639 NM_016223 ENSG00000165912 PACSIN3 SDPIII protein kinase C and casein kinase substrate in neurons 3 protein-coding chr2-12170 chr2 39434338 39434548 + 10.0 0.000 intron (NM_003618, intron 1 of 33) intron (NM_003618, intron 1 of 33) 2842 NM_001270425 8491 Hs.655750 NM_003618 ENSG00000011566 MAP4K3 GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding chr7-8525 chr7 54877658 54877868 + 10.0 0.000 Intergenic L1M4b|LINE|L1 118450 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr17-4642 chr17 15086247 15086457 + 10.0 0.000 Intergenic Intergenic 19835 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr10-5434 chr10 78025581 78025791 + 10.0 0.000 exon (NM_007055, exon 3 of 31) exon (NM_007055, exon 3 of 31) 3829 NM_007055 11128 Hs.436896 NM_007055 ENSG00000148606 POLR3A ADDH|HLD7|RPC1|RPC155|WDRTS|hRPC155 RNA polymerase III subunit A protein-coding chr11-5859 chr11 9902142 9902352 + 10.0 0.000 intron (NM_030962, intron 16 of 39) MER4D|LTR|ERV1 63105 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr11-3630 chr11 75072400 75072610 + 10.0 0.000 Intergenic Intergenic 24385 NM_001005285 341152 Hs.554515 NM_001005285 ENSG00000171561 OR2AT4 OR11-265 olfactory receptor family 2 subfamily AT member 4 protein-coding chr5-5325 chr5 128677951 128678161 + 10.0 0.000 Intergenic Intergenic -139811 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr13-1628 chr13 51539900 51540110 + 10.0 0.000 Intergenic Intergenic -12584 NR_039852 100616423 NR_039852 ENSG00000266611 MIR4703 - microRNA 4703 ncRNA chr10-6742 chr10 131933544 131933754 + 10.0 0.000 intron (NM_001291310, intron 3 of 9) intron (NM_001291310, intron 3 of 9) 32641 NM_001291310 55844 Hs.380372 NM_018461 ENSG00000175470 PPP2R2D B55D|B55delta|MDS026 protein phosphatase 2 regulatory subunit Bdelta protein-coding chr2-6086 chr2 172564096 172564306 + 10.0 0.000 intron (NM_001278549, intron 4 of 11) intron (NM_001278549, intron 4 of 11) 8111 NR_103729 5163 Hs.470633 NM_002610 ENSG00000152256 PDK1 - pyruvate dehydrogenase kinase 1 protein-coding chr3-3284 chr3 126422983 126423193 + 10.0 0.000 intron (NM_182628, intron 11 of 16) intron (NM_182628, intron 11 of 16) 28179 NM_182628 348807 Hs.591305 NM_182628 ENSG00000163885 CFAP100 CCDC37|MIA1 cilia and flagella associated protein 100 protein-coding chr1-16133 chr1 205127914 205128124 + 10.0 0.000 Intergenic MER57A-int|LTR|ERV1 -6041 NM_005057 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr9-2789 chr9 115590140 115590350 + 10.0 0.000 Intergenic LTR78|LTR|ERV1 153994 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr21-1053 chr21 28357175 28357385 + 10.0 0.000 Intergenic Intergenic -128613 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr1-4795 chr1 18938219 18938429 + 10.0 0.000 intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) 18352 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr4-5067 chr4 144173936 144174146 + 10.0 0.000 Intergenic L1MA5|LINE|L1 -33323 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr6-6694 chr6 217169 217379 + 10.0 0.000 Intergenic Intergenic -11790 NR_126020 285766 Hs.657946 NR_126020 ENSG00000263667 LOC285766 - uncharacterized LOC285766 ncRNA chr14-2312 chr14 76092066 76092276 + 10.0 0.000 Intergenic Intergenic -59714 NM_001322029 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr12-2737 chr12 20247243 20247453 + 10.0 0.000 Intergenic L1M1|LINE|L1 -119447 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr22-1167 chr22 24969924 24970134 + 10.0 0.000 Intergenic Intergenic -23334 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding chr7-1883 chr7 103280966 103281176 + 10.0 0.000 promoter-TSS (NR_003561) promoter-TSS (NR_003561) -605 NR_027768 349152 Hs.732579 NM_182634 ENSG00000170629 DPY19L2P2 - DPY19L2 pseudogene 2 pseudo chr5-8773 chr5 148362944 148363154 + 10.0 0.000 intron (NR_105057, intron 2 of 4) intron (NR_105057, intron 2 of 4) 20801 NR_105057 102546294 Hs.660461 NR_105057 ENSG00000247199 LOC102546294 - uncharacterized LOC102546294 ncRNA chr18-870 chr18 37935278 37935488 + 10.0 0.000 Intergenic Intergenic 278248 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr6-2153 chr6 15443195 15443405 + 10.0 0.000 intron (NM_004973, intron 3 of 17) intron (NM_004973, intron 3 of 17) 194445 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr14-1340 chr14 78259882 78260092 + 10.0 0.000 intron (NR_073547, intron 2 of 20) intron (NR_073547, intron 2 of 20) 89614 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr19-4214 chr19 47066561 47066771 + 10.0 0.000 exon (NM_015168, exon 15 of 15) exon (NM_015168, exon 15 of 15) -18042 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chr5-2047 chr5 112548293 112548503 + 10.0 0.000 Intergenic MER49|LTR|ERV1 -80038 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr17-3992 chr17 67962558 67962768 + 10.0 0.000 intron (NM_182641, intron 24 of 27) intron (NM_182641, intron 24 of 27) 30943 NM_181655 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr1-6396 chr1 10737145 10737355 + 10.0 0.000 intron (NM_001079843, intron 2 of 20) intron (NM_001079843, intron 2 of 20) 59396 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr7-2595 chr7 135980747 135980957 + 10.0 0.000 Intergenic MER51A|LTR|ERV1 -3493 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr3-4324 chr3 174193768 174193978 + 10.0 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -273077 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chrX-4489 chrX 64447835 64448045 + 10.0 0.000 Intergenic L2a|LINE|L2 -52488 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr3-5100 chr3 48726101 48726311 + 10.0 0.000 Intergenic HERVH-int|LTR|ERV1 -8928 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr11-2677 chr11 67272547 67272757 + 10.0 0.000 intron (NM_001619, intron 1 of 20) intron (NM_001619, intron 1 of 20) 6179 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr9-2209 chr9 135793916 135794126 + 10.0 0.000 3' UTR (NM_020822, exon 31 of 31) 3' UTR (NM_020822, exon 31 of 31) 91836 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr19-4848 chr19 38239648 38239858 + 10.0 0.000 Intergenic AluSp|SINE|Alu -10039 NM_001135156 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr1-5288 chr1 212637003 212637213 + 10.0 0.000 Intergenic MIR|SINE|MIR 12634 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding chr2-6553 chr2 218229796 218230006 + 10.0 0.000 intron (NM_152862, intron 4 of 10) L3b|LINE|CR1 12504 NM_005731 10109 Hs.529303 NM_005731 ENSG00000163466 ARPC2 ARC34|PNAS-139|PRO2446|p34-Arc actin related protein 2/3 complex subunit 2 protein-coding chr10-7631 chr10 23448815 23449025 + 10.0 0.000 Intergenic Intergenic 9651 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr16-3587 chr16 71927748 71927958 + 10.0 0.000 3' UTR (NM_001270977, exon 9 of 9) 3' UTR (NM_001270977, exon 9 of 9) 32322 NM_014761 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr10-7119 chr10 98790559 98790769 + 10.0 0.000 intron (NM_021828, intron 3 of 11) L1MA7|LINE|L1 133904 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr20-2453 chr20 29119618 29119828 + 10.0 0.000 Intergenic LTR53-int|LTR|ERVL 39333 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr3-4371 chr3 187843616 187843826 + 10.0 0.000 Intergenic Intergenic -98253 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr15-2142 chr15 74062866 74063076 + 10.0 0.000 Intergenic Intergenic 19579 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr21-191 chr21 45405665 45405875 + 10.0 0.000 intron (NM_130445, intron 2 of 42) CpG-18567 605 NM_130445 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr10-8643 chr10 99388856 99389066 + 10.0 0.000 intron (NM_020348, intron 9 of 10) intron (NM_020348, intron 9 of 10) 41663 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr12-3668 chr12 121106711 121106921 + 10.0 0.000 Intergenic L1M1|LINE|L1 -26060 NR_033956 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr12-5376 chr12 119966696 119966906 + 10.0 0.000 Intergenic Intergenic -22435 NM_001367886 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chr4-4395 chr4 41902090 41902300 + 10.0 0.000 Intergenic L1PA7|LINE|L1 -19584 NR_104143 101927074 Hs.611425 NR_104143 ENSG00000245870 LINC00682 - long intergenic non-protein coding RNA 682 ncRNA chr1-4352 chr1 86296937 86297147 + 10.0 0.000 Intergenic MER49|LTR|ERV1 60645 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr4-5220 chr4 167968147 167968357 + 10.0 0.000 Intergenic L1MA2|LINE|L1 -124285 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr4-6895 chr4 14083132 14083342 + 10.0 0.000 Intergenic Intergenic -28731 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr14-3187 chr14 71813643 71813853 + 10.0 0.000 Intergenic L1M7|LINE|L1 -118423 NM_001204423 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr1-13030 chr1 164701002 164701212 + 10.0 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 73534 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr15-2463 chr15 84104032 84104242 + 10.0 0.000 intron (NR_036652, intron 5 of 9) intron (NR_036652, intron 5 of 9) 23950 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr13-4177 chr13 89094559 89094769 + 10.0 0.000 Intergenic AluSx4|SINE|Alu -140627 NR_047025 100874172 Hs.569291 NR_047025 LINC00440 - long intergenic non-protein coding RNA 440 ncRNA chr12-3418 chr12 108923737 108923947 + 10.0 0.000 intron (NM_018711, intron 11 of 15) intron (NM_018711, intron 11 of 15) 43750 NM_001917 1610 Hs.113227 NM_001917 ENSG00000110887 DAO DAAO|DAMOX|OXDA D-amino acid oxidase protein-coding chr11-9399 chr11 57491500 57491710 + 10.0 0.000 exon (NM_003627, exon 10 of 15) exon (NM_003627, exon 10 of 15) 23304 NM_001198810 8501 Hs.591952 NM_003627 ENSG00000149150 SLC43A1 LAT3|PB39|POV1|R00504 solute carrier family 43 member 1 protein-coding chr1-5425 chr1 30328586 30328796 + 10.0 0.000 Intergenic Intergenic -291079 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr2-3621 chr2 111522619 111522829 + 10.0 0.000 Intergenic Intergenic -27563 NR_136166 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr11-4400 chr11 78886686 78886896 + 10.0 0.000 intron (NM_001098816, intron 9 of 33) intron (NM_001098816, intron 9 of 33) -311927 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr16-994 chr16 3106637 3106847 + 10.0 0.000 Intergenic CpG -5837 NM_001278158 7755 Hs.592088 NM_003456 ENSG00000122386 ZNF205 RhitH|ZNF210|Zfp13 zinc finger protein 205 protein-coding chr1-6338 chr1 5716729 5716939 + 10.0 0.000 Intergenic MER74A|LTR|ERVL 145907 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr8-1883 chr8 22739280 22739490 + 10.0 0.000 intron (NM_001363233, intron 4 of 6) intron (NM_001363233, intron 4 of 6) -45905 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr5-2081 chr5 176411585 176411795 + 10.0 0.000 promoter-TSS (NM_001364126) promoter-TSS (NM_001364126) -867 NM_001364126 1212 Hs.484241 NM_001834 ENSG00000175416 CLTB LCB clathrin light chain B protein-coding chr9-7869 chr9 86424567 86424777 + 10.0 0.000 Intergenic Intergenic -70262 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chrX-2308 chrX 54695265 54695475 + 10.0 0.000 Intergenic MER68|LTR|ERVL 102885 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr5-3254 chr5 99338831 99339041 + 10.0 0.000 Intergenic L1M2|LINE|L1 -195054 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr1-15832 chr1 179547990 179548200 + 10.0 0.000 intron (NR_073544, intron 25 of 25) intron (NR_073544, intron 25 of 25) 27853 NM_001297575 7827 Hs.412710 NM_014625 ENSG00000116218 NPHS2 PDCN|SRN1 NPHS2 stomatin family member, podocin protein-coding chr1-3553 chr1 231630676 231630886 + 10.0 0.000 intron (NM_001164556, intron 1 of 4) intron (NM_001164556, intron 1 of 4) 3966 NM_001164548 27185 Hs.13318 NM_018662 ENSG00000162946 DISC1 C1orf136|SCZD9 DISC1 scaffold protein protein-coding chr2-4170 chr2 182504877 182505087 + 10.0 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) 17544 NM_005019 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr20-3620 chr20 6898898 6899108 + 10.0 0.000 Intergenic Intergenic 131317 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr12-1485 chr12 19946074 19946284 + 10.0 0.000 Intergenic Intergenic -68506 NR_040098 100506393 Hs.658356 NR_040098 ENSG00000256287 LINC02398 - long intergenic non-protein coding RNA 2398 ncRNA chr1-5159 chr1 162572315 162572525 + 10.0 0.000 intron (NM_003115, intron 2 of 9) intron (NM_003115, intron 2 of 9) 10521 NM_001324113 6675 Hs.492859 NM_003115 ENSG00000117143 UAP1 AGX|AGX1|AGX2|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding chr7-8861 chr7 89796025 89796235 + 10.0 0.000 Intergenic L1PA13|LINE|L1 -323270 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr1-4066 chr1 211705570 211705780 + 10.0 0.000 Intergenic Intergenic 29913 NR_148994 91548 Hs.367839 NR_148994 LOC91548 - uncharacterized LOC91548 ncRNA chr12-3441 chr12 111821431 111821641 + 10.0 0.000 Intergenic MER11C|LTR|ERVK 20394 NR_152608 51275 Hs.333120 NR_015404 ENSG00000234608 MAPKAPK5-AS1 C12orf47 MAPKAPK5 antisense RNA 1 ncRNA chr7-7447 chr7 83700697 83700907 + 10.0 0.000 Intergenic Intergenic -51663 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr19-2691 chr19 18043667 18043877 + 10.0 0.000 Intergenic L1M5|LINE|L1 35602 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr3-3456 chr3 156693372 156693582 + 10.0 0.000 intron (NM_015508, intron 2 of 5) intron (NM_015508, intron 2 of 5) 16813 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr1-2743 chr1 31176495 31176705 + 10.0 0.000 Intergenic SVA_D|Retroposon|SVA 63287 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr1-4547 chr1 62228779 62228989 + 10.0 0.000 Intergenic Intergenic 34035 NM_019079 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr20-2132 chr20 35680017 35680227 + 10.0 0.000 intron (NR_037570, intron 8 of 13) AluY|SINE|Alu -15222 NM_001198863 8904 Hs.246413 NM_003915 ENSG00000214078 CPNE1 COPN1|CPN1 copine 1 protein-coding chr3-6348 chr3 82756957 82757167 + 10.0 0.000 Intergenic Intergenic 770920 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr5-2255 chr5 16809096 16809306 + 10.0 0.000 intron (NM_012334, intron 3 of 40) intron (NM_012334, intron 3 of 40) 127087 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr1-5554 chr1 234574018 234574228 + 10.0 0.000 Intergenic Zaphod|DNA|hAT-Tip100 35402 NM_001077397 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr4-4519 chr4 65248134 65248344 + 10.0 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -243739 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr2-7895 chr2 54966122 54966332 + 10.0 0.000 intron (NM_001039753, intron 37 of 40) L2c|LINE|L2 44045 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr4-2773 chr4 16897097 16897307 + 10.0 0.000 intron (NR_130734, intron 1 of 6) intron (NR_130734, intron 1 of 6) 1443 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr12-5035 chr12 87428783 87428993 + 10.0 0.000 Intergenic LTR16B1|LTR|ERVL 98149 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr13-1690 chr13 78750720 78750930 + 10.0 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 89225 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr19-1708 chr19 33195187 33195397 + 10.0 0.000 intron (NM_002333, intron 1 of 6) intron (NM_002333, intron 1 of 6) 962 NM_002333 4037 Hs.515340 NM_002333 ENSG00000130881 LRP3 - LDL receptor related protein 3 protein-coding chr3-9405 chr3 48349501 48349711 + 10.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -21265 NM_001080525 646424 Hs.257687 NM_001080525 ENSG00000229453 SPINK8 - serine peptidase inhibitor, Kazal type 8 (putative) protein-coding chr16-3093 chr16 67396422 67396632 + 10.0 0.000 intron (NM_001323627, intron 8 of 11) intron (NM_001323627, intron 8 of 11) -3029 NM_016140 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr9-6852 chr9 73538046 73538256 + 10.0 0.000 Intergenic Intergenic 386286 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr19-3075 chr19 4220438 4220648 + 10.0 0.000 intron (NM_133475, intron 19 of 21) intron (NM_133475, intron 19 of 21) -8980 NM_005755 10148 Hs.501452 NM_005755 ENSG00000105246 EBI3 IL-27B|IL27B|IL35B Epstein-Barr virus induced 3 protein-coding chr5-7941 chr5 79839884 79840094 + 10.0 0.000 Intergenic Intergenic -96590 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr9-8240 chr9 110351848 110352058 + 10.0 0.000 Intergenic AluSx1|SINE|Alu -14069 NM_001286947 255220 Hs.147064 NM_001003936 ENSG00000204193 TXNDC8 SPTRX-3|SPTRX3|TRX6|bA427L11.2 thioredoxin domain containing 8 protein-coding chr2-12945 chr2 102491013 102491223 + 10.0 0.000 intron (NM_001011552, intron 2 of 11) MLT1I|LTR|ERVL-MaLR 17892 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding chr3-4080 chr3 100603542 100603752 + 10.0 0.000 Intergenic Intergenic -5954 NM_032787 84873 Hs.334511 NM_032787 ENSG00000144820 ADGRG7 GPR128 adhesion G protein-coupled receptor G7 protein-coding chr11-5198 chr11 12272570 12272780 + 10.0 0.000 Intergenic Intergenic -14225 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr4-2980 chr4 118033019 118033229 + 10.0 0.000 promoter-TSS (NR_146513) promoter-TSS (NR_146513) -198 NR_146513 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chr12-2924 chr12 67706085 67706295 + 10.0 0.000 Intergenic Intergenic 23285 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr4-3765 chr4 90185544 90185754 + 10.0 0.000 intron (NM_001145065, intron 1 of 10) intron (NM_001145065, intron 1 of 10) -49382 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr10-3655 chr10 100345649 100345859 + 10.0 0.000 Intergenic Intergenic -1479 NM_005063 6319 Hs.558396 NM_005063 ENSG00000099194 SCD FADS5|MSTP008|SCD1|SCDOS|hSCD1 stearoyl-CoA desaturase protein-coding chr18-1810 chr18 13452940 13453150 + 10.0 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -6902 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr14-2695 chr14 82590029 82590239 + 10.0 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -52498 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr17-7747 chr17 34407943 34408153 + 10.0 0.000 Intergenic L2c|LINE|L2 -44815 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr19-3899 chr19 40849209 40849419 + 10.0 0.000 intron (NM_000762, intron 2 of 8) intron (NM_000762, intron 2 of 8) 1133 NM_000762 1548 Hs.250615 NM_000762 ENSG00000255974 CYP2A6 CPA6|CYP2A|CYP2A3|CYPIIA6|P450C2A|P450PB cytochrome P450 family 2 subfamily A member 6 protein-coding chr11-5224 chr11 17390997 17391207 + 10.0 0.000 Intergenic Intergenic -1756 NM_001166290 3767 Hs.248141 NM_000525 ENSG00000187486 KCNJ11 BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3 potassium voltage-gated channel subfamily J member 11 protein-coding chr6-2653 chr6 898252 898462 + 10.0 0.000 Intergenic MER5C|DNA|hAT-Charlie 29859 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr15-3109 chr15 64949687 64949897 + 10.0 0.000 intron (NM_182703, intron 13 of 14) intron (NM_182703, intron 13 of 14) 37890 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr14-1703 chr14 104102478 104102688 + 10.0 0.000 intron (NM_001080464, intron 6 of 15) intron (NM_001080464, intron 6 of 15) -14822 NR_029620 406986 NR_029620 ENSG00000207568 MIR203A MIR203|MIRN203|hsa-mir-203a|miR-203|miRNA203|mir-203a microRNA 203a ncRNA chr9-6840 chr9 69357479 69357689 + 10.0 0.000 intron (NM_001127608, intron 2 of 10) intron (NM_001127608, intron 2 of 10) 28259 NM_004816 9413 Hs.118003 NM_004816 ENSG00000135063 FAM189A2 C9orf61|X123 family with sequence similarity 189 member A2 protein-coding chr15-1871 chr15 63177206 63177416 + 10.0 0.000 Intergenic Tigger14a|DNA|TcMar-Tigger -12295 NM_016530 51762 Hs.389733 NM_016530 ENSG00000166128 RAB8B - RAB8B, member RAS oncogene family protein-coding chr11-2323 chr11 67496047 67496257 + 10.0 0.000 intron (NM_004910, intron 15 of 23) intron (NM_004910, intron 15 of 23) 5907 NR_106810 102465450 NR_106810 ENSG00000276769 MIR6752 hsa-mir-6752 microRNA 6752 ncRNA chr21-433 chr21 44288830 44289040 + 10.0 0.000 intron (NM_000383, intron 5 of 13) intron (NM_000383, intron 5 of 13) 3059 NM_000383 326 Hs.129829 NM_000383 ENSG00000160224 AIRE AIRE1|APECED|APS1|APSI|PGA1 autoimmune regulator protein-coding chr8-2057 chr8 120585197 120585407 + 10.0 0.000 intron (NM_021021, intron 3 of 6) intron (NM_021021, intron 3 of 6) 139883 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr12-3459 chr12 117036189 117036399 + 10.0 0.000 Intergenic Intergenic -48957 NR_103809 100506551 Hs.657861 NR_103809 ENSG00000257279 LOC100506551 - uncharacterized LOC100506551 ncRNA chrX-1241 chrX 95273510 95273720 + 10.0 0.000 Intergenic THE1D|LTR|ERVL-MaLR -210389 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr2-5618 chr2 187689491 187689701 + 10.0 0.000 Intergenic Intergenic -135091 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr16-2642 chr16 26624577 26624787 + 10.0 0.000 Intergenic Intergenic -442245 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr6-760 chr6 122610350 122610560 + 10.0 0.000 promoter-TSS (NM_181795) promoter-TSS (NM_181795) 50 NM_181795 5570 Hs.741340 NM_032471 ENSG00000135549 PKIB PRKACN2 cAMP-dependent protein kinase inhibitor beta protein-coding chr20-765 chr20 36854541 36854751 + 10.0 0.000 intron (NM_080627, intron 1 of 14) intron (NM_080627, intron 1 of 14) 5227 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr16-3919 chr16 84084793 84085003 + 10.0 0.000 intron (NM_003791, intron 10 of 22) intron (NM_003791, intron 10 of 22) 32044 NM_003791 8720 Hs.75890 NM_003791 ENSG00000140943 MBTPS1 PCSK8|S1P|SEDKF|SKI-1 membrane bound transcription factor peptidase, site 1 protein-coding chr12-7672 chr12 85139759 85139969 + 10.0 0.000 intron (NM_001079910, intron 19 of 26) intron (NM_001079910, intron 19 of 26) 103513 NM_001079910 84125 Hs.402200 NM_032165 ENSG00000133640 LRRIQ1 - leucine rich repeats and IQ motif containing 1 protein-coding chr1-6064 chr1 92859643 92859853 + 10.0 0.000 intron (NM_001252269, intron 1 of 3) AluJr|SINE|Alu 17402 NM_001252271 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr1-6715 chr1 58218560 58218770 + 10.0 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 31838 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr3-3150 chr3 168717923 168718133 + 10.0 0.000 intron (NR_021485, intron 6 of 15) L1MA1|LINE|L1 166174 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr17-6652 chr17 69637581 69637791 + 10.0 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 43699 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr3-2305 chr3 118884780 118884990 + 10.0 0.000 Intergenic Intergenic -58191 NR_046230 100506765 Hs.660823 NR_046230 ENSG00000239877 IGSF11-AS1 - IGSF11 antisense RNA 1 ncRNA chr19-2225 chr19 43031710 43031920 + 10.0 0.000 Intergenic LTR13|LTR|ERVK -5346 NM_203287 5680 Hs.741150 NM_002785 ENSG00000243130 PSG11 PSBG-11|PSBG-13|PSG13|PSG14 pregnancy specific beta-1-glycoprotein 11 protein-coding chr7-8006 chr7 16957003 16957213 + 10.0 0.000 Intergenic HSMAR1|DNA|TcMar-Mariner -75125 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr17-974 chr17 4739494 4739704 + 10.0 0.000 promoter-TSS (NM_001267822) promoter-TSS (NM_001267822) -234 NM_001136046 84225 Hs.47223 NM_032265 ENSG00000141497 ZMYND15 SPGF14 zinc finger MYND-type containing 15 protein-coding chr7-6099 chr7 118620607 118620817 + 10.0 0.000 Intergenic Intergenic 396008 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr5-3785 chr5 73628749 73628959 + 10.0 0.000 intron (NM_001177693, intron 1 of 35) intron (NM_001177693, intron 1 of 35) 2696 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr5-1708 chr5 123819763 123819973 + 10.0 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu 274451 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr1-12274 chr1 227521902 227522112 + 10.0 0.000 Intergenic L1PA12|LINE|L1 -41549 NM_178549 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chrX-4793 chrX 99282014 99282224 + 10.0 0.000 Intergenic Intergenic 1128154 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr7-6123 chr7 122412986 122413196 + 10.0 0.000 intron (NM_001363400, intron 20 of 30) MIRb|SINE|MIR -108341 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chr16-5925 chr16 3257188 3257398 + 10.0 0.000 promoter-TSS (NM_000243) promoter-TSS (NM_000243) -666 NM_000243 4210 Hs.632221 NM_000243 ENSG00000103313 MEFV FMF|MEF|TRIM20 MEFV innate immuity regulator, pyrin protein-coding chr10-1581 chr10 14904303 14904513 + 10.0 0.000 TTS (NR_146962) TTS (NR_146962) 25508 NM_024670 79723 Hs.554883 NM_024670 ENSG00000152455 SUV39H2 KMT1B suppressor of variegation 3-9 homolog 2 protein-coding chr4-3840 chr4 124529236 124529446 + 10.0 0.000 intron (NR_110838, intron 5 of 8) MLT1J|LTR|ERVL-MaLR 29093 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr3-3218 chr3 196279518 196279728 + 10.0 0.000 intron (NM_001312673, intron 1 of 8) intron (NM_001312673, intron 1 of 8) 8103 NM_001312673 5130 Hs.135997 NM_005017 ENSG00000161217 PCYT1A CCTA|CT|CTA|CTPCT|PCYT1|SMDCRD phosphate cytidylyltransferase 1, choline, alpha protein-coding chr4-2461 chr4 787796 788006 + 10.0 0.000 intron (NM_006651, intron 3 of 3) intron (NM_006651, intron 3 of 3) -6053 NR_036511 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr11-7018 chr11 117898039 117898249 + 10.0 0.000 Intergenic Intergenic -20714 NM_001164831 53826 Hs.744850 NM_022003 ENSG00000137726 FXYD6 - FXYD domain containing ion transport regulator 6 protein-coding chrX-4231 chrX 38553048 38553258 + 10.0 0.000 Intergenic Intergenic -8325 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr17-7537 chr17 18079533 18079743 + 10.0 0.000 Intergenic Intergenic -8310 NM_001330144 1819 Hs.78582 NM_001388 ENSG00000108591 DRG2 - developmentally regulated GTP binding protein 2 protein-coding chr18-2953 chr18 21742260 21742470 + 10.0 0.000 intron (NM_020774, intron 1 of 20) intron (NM_020774, intron 1 of 20) 1036 NM_020774 57534 Hs.140903 NM_020774 ENSG00000101752 MIB1 DIP-1|DIP1|LVNC7|MIB|ZZANK2|ZZZ6 mindbomb E3 ubiquitin protein ligase 1 protein-coding chr4-3539 chr4 168486929 168487139 + 10.0 0.000 Intergenic Intergenic -6520 NM_001012967 91351 Hs.535011 NM_001012967 ENSG00000181381 DDX60L - DExD/H-box 60 like protein-coding chr2-6962 chr2 121872418 121872628 + 10.0 0.000 Intergenic Intergenic 116872 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr4-3276 chr4 126977500 126977710 + 10.0 0.000 Intergenic LTR16B2|LTR|ERVL -655352 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr3-5384 chr3 152375475 152375685 + 10.0 0.000 intron (NM_001314057, intron 2 of 11) AluJb|SINE|Alu -34590 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr12-4771 chr12 53063266 53063476 + 10.0 0.000 TTS (NM_032840) TTS (NM_032840) 6427 NR_106815 102466193 NR_106815 ENSG00000278108 MIR6757 hsa-mir-6757 microRNA 6757 ncRNA chr20-907 chr20 49936481 49936691 + 10.0 0.000 intron (NM_018683, intron 1 of 5) CpG 189 NM_018683 55905 Hs.144949 NM_018683 ENSG00000124226 RNF114 PSORS12|ZNF313 ring finger protein 114 protein-coding chr11-7447 chr11 120880537 120880747 + 10.0 0.000 intron (NM_001282470, intron 10 of 19) L3|LINE|CR1 14155 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr12-3115 chr12 28378804 28379014 + 10.0 0.000 intron (NM_001330367, intron 7 of 11) intron (NM_001330367, intron 7 of 11) -188171 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr4-5823 chr4 99968266 99968476 + 10.0 0.000 intron (NR_125923, intron 1 of 3) MER5B|DNA|hAT-Charlie 17877 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chr9-2145 chr9 116287758 116287968 + 10.0 0.000 intron (NM_002581, intron 9 of 21) intron (NM_002581, intron 9 of 21) 112743 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr17-4361 chr17 16100735 16100945 + 10.0 0.000 intron (NM_001190440, intron 19 of 44) intron (NM_001190440, intron 19 of 44) 52356 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr6-2651 chr6 169723548 169723758 + 10.0 0.000 intron (NM_018288, intron 1 of 11) CpG 357 NM_133325 55274 Hs.435933 NM_018288 ENSG00000130024 PHF10 BAF45A|XAP135 PHD finger protein 10 protein-coding chr6-3288 chr6 157715835 157716045 + 10.0 0.000 Intergenic Intergenic -107306 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr6-2478 chr6 46684815 46685025 + 10.0 0.000 intron (NR_144468, intron 1 of 3) L1MD2|LINE|L1 2913 NR_134642 101926934 Hs.664979 NR_134642 ENSG00000242973 LOC101926934 - uncharacterized LOC101926934 ncRNA chr12-4833 chr12 57449802 57450012 + 10.0 0.000 exon (NM_005538, exon 2 of 2) exon (NM_005538, exon 2 of 2) -5400 NM_031479 83729 Hs.632713 NM_031479 ENSG00000139269 INHBE - inhibin subunit beta E protein-coding chr1-7874 chr1 110483562 110483772 + 10.0 0.000 intron (NR_003599, intron 2 of 8) intron (NR_003599, intron 2 of 8) 2901 NR_003599 643160 Hs.532720 NR_003599 ENSG00000240194 CYMP - chymosin pseudogene pseudo chr10-7837 chr10 44910140 44910350 + 10.0 0.000 intron (NR_033842, intron 2 of 7) MER47A|DNA|TcMar-Tigger -1071 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr14-3623 chr14 61032910 61033120 + 10.0 0.000 intron (NR_033344, intron 6 of 16) intron (NR_033344, intron 6 of 16) -51325 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr13-3485 chr13 20080756 20080966 + 10.0 0.000 intron (NR_148365, intron 21 of 24) intron (NR_148365, intron 21 of 24) -21840 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr11-8822 chr11 11944285 11944495 + 10.0 0.000 intron (NM_001282659, intron 20 of 27) intron (NM_001282659, intron 20 of 27) 64249 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr5-4299 chr5 150615253 150615463 + 10.0 0.000 intron (NM_001166208, intron 1 of 2) intron (NM_001166208, intron 1 of 2) -2286 NM_001166209 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr4-2126 chr4 73257727 73257937 + 10.0 0.000 intron (NM_032217, intron 1 of 33) intron (NM_032217, intron 1 of 33) 966 NM_015574 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chr6-2910 chr6 15491511 15491721 + 10.0 0.000 intron (NM_004973, intron 6 of 17) intron (NM_004973, intron 6 of 17) 171412 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr2-8561 chr2 134775088 134775298 + 10.0 0.000 Intergenic Intergenic -56193 NM_030923 81615 Hs.369471 NM_030923 ENSG00000152128 TMEM163 DC29|SV31 transmembrane protein 163 protein-coding chr12-1650 chr12 27332745 27332955 + 10.0 0.000 promoter-TSS (NM_020183) promoter-TSS (NM_020183) 14 NM_020183 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr9-5425 chr9 96329065 96329275 + 10.0 0.000 intron (NM_001286990, intron 6 of 8) Ricksha_c|DNA|MULE-MuDR -26994 NM_000197 3293 Hs.477 NM_000197 ENSG00000130948 HSD17B3 EDH17B3|SDR12C2 hydroxysteroid 17-beta dehydrogenase 3 protein-coding chr4-3232 chr4 53982465 53982675 + 10.0 0.000 Intergenic Tigger4|DNA|TcMar-Tigger 4712 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr19-5116 chr19 58187086 58187296 + 10.0 0.000 intron (NM_133502, intron 4 of 7) intron (NM_133502, intron 4 of 7) 4130 NM_133502 10782 Hs.83761 NM_016324 ENSG00000171606 ZNF274 HFB101|ZF2|ZKSCAN19|ZSCAN51 zinc finger protein 274 protein-coding chr17-2444 chr17 18916949 18917159 + 10.0 0.000 intron (NM_001353099, intron 9 of 11) intron (NM_001353099, intron 9 of 11) -33622 NM_001282417 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr9-3928 chr9 135190225 135190435 + 10.0 0.000 Intergenic Intergenic 8721 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chrX-757 chrX 20542700 20542910 + 10.0 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -275896 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr13-2365 chr13 39111818 39112028 + 10.0 0.000 Intergenic Intergenic 73467 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr11-3780 chr11 61655463 61655673 + 10.0 0.000 Intergenic LTR5_Hs|LTR|ERVK -24823 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr4-3832 chr4 122777899 122778109 + 10.0 0.000 Intergenic Intergenic 45300 NM_152618 166379 Hs.400698 NM_152618 ENSG00000181004 BBS12 C4orf24 Bardet-Biedl syndrome 12 protein-coding chr4-8540 chr4 164626800 164627010 + 10.0 0.000 Intergenic L1MA4A|LINE|L1 -127226 NM_001352885 100505989 Hs.328236 NM_001352885 ENSG00000248771 SMIM31 LINC01207 small integral membrane protein 31 protein-coding chr14-2971 chr14 50795976 50796186 + 10.0 0.000 intron (NM_016350, intron 4 of 28) intron (NM_016350, intron 4 of 28) -25716 NR_135258 105370489 Hs.569387 NR_135258 ENSG00000258843 LOC105370489 - uncharacterized LOC105370489 ncRNA chr2-5908 chr2 9030913 9031123 + 10.0 0.000 Intergenic Intergenic -27334 NM_001321267 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr8-3514 chr8 116687965 116688175 + 10.0 0.000 intron (NM_003756, intron 2 of 7) intron (NM_003756, intron 2 of 7) 35970 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr4-2833 chr4 44448185 44448395 + 10.0 0.000 exon (NM_198353, exon 1 of 2) exon (NM_198353, exon 1 of 2) 519 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr10-5378 chr10 74072565 74072775 + 10.0 0.000 intron (NM_014000, intron 4 of 21) intron (NM_014000, intron 4 of 21) 74554 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr11-5591 chr11 110979785 110979995 + 10.0 0.000 Intergenic Intergenic 117428 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr6-4830 chr6 82989856 82990066 + 10.0 0.000 intron (NR_146807, intron 9 of 10) Charlie4z|DNA|hAT-Charlie 75880 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr8-4308 chr8 98012692 98012902 + 10.0 0.000 intron (NM_002380, intron 10 of 18) MIR3|SINE|MIR 29420 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr1-13063 chr1 176538343 176538553 + 10.0 0.000 intron (NM_021936, intron 1 of 4) MIRb|SINE|MIR 75273 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr15-1655 chr15 99917438 99917648 + 10.0 0.000 Intergenic Intergenic 110520 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr6-2906 chr6 14476787 14476997 + 10.0 0.000 Intergenic Intergenic -191438 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr6-5826 chr6 21265739 21265949 + 10.0 0.000 Intergenic L1PA16|LINE|L1 246048 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr12-3383 chr12 101633555 101633765 + 10.0 0.000 intron (NM_206821, intron 6 of 28) AluSg|SINE|Alu 38689 NM_002465 4604 Hs.654589 NM_002465 ENSG00000196091 MYBPC1 LCCS4|MYBPCC|MYBPCS myosin binding protein C, slow type protein-coding chr11-6178 chr11 44995112 44995322 + 10.0 0.000 Intergenic L2|LINE|L2 21315 NR_026681 221122 Hs.551656 NR_026681 ENSG00000254654 LINC02685 - long intergenic non-protein coding RNA 2685 ncRNA chr13-2053 chr13 51342838 51343048 + 10.0 0.000 intron (NM_001101320, intron 1 of 6) intron (NM_001101320, intron 1 of 6) 1911 NM_001101320 647174 Hs.685891 NM_001101320 ENSG00000253309 SERPINE3 - serpin family E member 3 protein-coding chr5-1258 chr5 59840358 59840568 + 10.0 0.000 intron (NM_001165899, intron 3 of 16) L2a|LINE|L2 53263 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr18-762 chr18 10442484 10442694 + 10.0 0.000 Intergenic Intergenic -12046 NM_153000 147495 Hs.293274 NM_153000 ENSG00000154856 APCDD1 B7323|DRAPC1|FP7019|HHS|HTS|HYPT1 APC down-regulated 1 protein-coding chr3-3890 chr3 42228924 42229134 + 10.0 0.000 Intergenic Intergenic 34918 NM_001174138 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr17-8385 chr17 75013429 75013639 + 10.0 0.000 intron (NM_001545, intron 1 of 5) L2a|LINE|L2 864 NM_001303265 3396 Hs.407955 NM_001545 ENSG00000167862 MRPL58 DS-1|DS1|ICT1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding chr22-1637 chr22 36507117 36507327 + 10.0 0.000 promoter-TSS (NM_001102371) promoter-TSS (NM_001102371) -182 NM_001363041 80020 Hs.387601 NM_024955 ENSG00000100350 FOXRED2 ERFAD FAD dependent oxidoreductase domain containing 2 protein-coding chr9-7367 chr9 16719824 16720034 + 10.0 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -6885 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr15-3149 chr15 67313405 67313615 + 10.0 0.000 intron (NM_001322475, intron 3 of 17) intron (NM_001322475, intron 3 of 17) -58312 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding chr15-1868 chr15 62976598 62976808 + 10.0 0.000 Intergenic Intergenic -66044 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr2-2820 chr2 71276958 71277168 + 10.0 0.000 Intergenic CpG -49960 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr9-5871 chr9 131238022 131238232 + 10.0 0.000 Intergenic MIRb|SINE|MIR 38383 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr1-14530 chr1 51349607 51349817 + 10.0 0.000 Intergenic MamRep605|LTR?|LTR? -4596 NM_001144832 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr16-4607 chr16 69017588 69017798 + 10.0 0.000 intron (NM_024562, intron 15 of 17) MIR3|SINE|MIR -87960 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr13-2417 chr13 44842361 44842571 + 10.0 0.000 Intergenic Intergenic -32836 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr9-6190 chr9 90816258 90816468 + 10.0 0.000 intron (NM_001174168, intron 1 of 12) intron (NM_001174168, intron 1 of 12) -11057 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr1-14568 chr1 53294727 53294937 + 10.0 0.000 intron (NM_004631, intron 2 of 18) intron (NM_004631, intron 2 of 18) 33238 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr2-9528 chr2 238481567 238481777 + 10.0 0.000 Intergenic Intergenic 54745 NM_001330196 51665 Hs.516788 NM_016114 ENSG00000065802 ASB1 ASB-1 ankyrin repeat and SOCS box containing 1 protein-coding chr19-2196 chr19 19000307 19000517 + 10.0 0.000 intron (NR_147915, intron 9 of 11) intron (NR_147915, intron 9 of 11) 33105 NR_147913 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr8-3403 chr8 66748525 66748735 + 10.0 0.000 intron (NM_001033578, intron 1 of 16) intron (NM_001033578, intron 1 of 16) 19404 NR_002734 26255 Hs.647156 NR_002734 ENSG00000213005 PTTG3P PTTG3|rcPTTG1 pituitary tumor-transforming 3, pseudogene pseudo chr1-6888 chr1 118683204 118683414 + 10.0 0.000 Intergenic L1M5|LINE|L1 305034 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr12-2527 chr12 96346835 96347045 + 10.0 0.000 intron (NM_002595, intron 1 of 16) L1MB4|LINE|L1 53499 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr18-527 chr18 63897231 63897441 + 10.0 0.000 intron (NM_002575, intron 4 of 7) intron (NM_002575, intron 4 of 7) 9631 NM_002575 5055 Hs.594481 NM_002575 ENSG00000197632 SERPINB2 HsT1201|PAI|PAI-2|PAI2|PLANH2 serpin family B member 2 protein-coding chr9-2714 chr9 89139024 89139234 + 10.0 0.000 intron (NM_016848, intron 1 of 11) MER41-int|LTR|ERV1 39689 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr14-1759 chr14 76266252 76266462 + 10.0 0.000 Intergenic MIRb|SINE|MIR -104990 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr8-4089 chr8 68050646 68050856 + 10.0 0.000 intron (NM_024870, intron 8 of 39) intron (NM_024870, intron 8 of 39) 98705 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr1-5865 chr1 2046254 2046464 + 10.0 0.000 Intergenic Intergenic 3711 NR_135509 105378591 Hs.371879 NR_135509 ENSG00000226969 LOC105378591 - uncharacterized LOC105378591 ncRNA chr3-3126 chr3 150781928 150782138 + 10.0 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -18864 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding chr13-2535 chr13 62182732 62182942 + 10.0 0.000 Intergenic L1MA9|LINE|L1 -29445 NR_125787 103752583 Hs.578048 NR_125787 LINC01075 - long intergenic non-protein coding RNA 1075 ncRNA chr3-5901 chr3 39630901 39631111 + 10.0 0.000 Intergenic Intergenic 128940 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr6-1732 chr6 39884629 39884839 + 10.0 0.000 intron (NM_015345, intron 15 of 24) intron (NM_015345, intron 15 of 24) 12646 NR_125831 100505635 Hs.668513 NR_125831 ENSG00000235033 LOC100505635 - uncharacterized LOC100505635 ncRNA chr17-7708 chr17 32416253 32416463 + 10.0 0.000 Intergenic L1M5|LINE|L1 -28152 NM_001270482 5717 Hs.443379 NM_002815 ENSG00000108671 PSMD11 Rpn6|S9|p44.5 proteasome 26S subunit, non-ATPase 11 protein-coding chr2-4059 chr2 113756340 113756550 + 10.0 0.000 non-coding (NR_104470, exon 1 of 17) non-coding (NR_104470, exon 1 of 17) 197 NM_001330317 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr20-3023 chr20 51971838 51972048 + 10.0 0.000 Intergenic Intergenic -109030 NR_110016 101927678 Hs.683840 NR_110016 ENSG00000227964 LINC01429 - long intergenic non-protein coding RNA 1429 ncRNA chr4-5106 chr4 148779109 148779319 + 10.0 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 163164 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr3-1628 chr3 57165164 57165374 + 10.0 0.000 promoter-TSS (NM_017563) promoter-TSS (NM_017563) 84 NM_017563 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding chr3-8017 chr3 189036433 189036643 + 10.0 0.000 Intergenic L1MEh|LINE|L1 -88899 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr4-7940 chr4 109347634 109347844 + 10.0 0.000 Intergenic AluSx4|SINE|Alu 44704 NR_160939 645078 Hs.518784 NM_001039778 ZCCHC23 - zinc finger CCHC-type containing 23 ncRNA chr2-5411 chr2 111570457 111570667 + 10.0 0.000 Intergenic Intergenic -75401 NR_136166 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr1-6257 chr1 234628222 234628432 + 10.0 0.000 promoter-TSS (NR_033927) promoter-TSS (NR_033927) -984 NR_033927 100302691 Hs.209162 NR_033927 ENSG00000224939 LINC00184 HANC|NCRNA00184 long intergenic non-protein coding RNA 184 ncRNA chr7-1561 chr7 46569270 46569480 + 10.0 0.000 Intergenic Intergenic 127747 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr8-4411 chr8 106973779 106973989 + 10.0 0.000 Intergenic L2c|LINE|L2 -203640 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr8-7186 chr8 124527214 124527424 + 10.0 0.000 intron (NM_001317889, intron 1 of 12) MER72B|LTR|ERV1 11766 NM_032026 83940 Hs.170568 NM_032026 ENSG00000147687 TATDN1 CDA11 TatD DNase domain containing 1 protein-coding chr11-3078 chr11 15101244 15101454 + 10.0 0.000 Intergenic Intergenic -11075 NM_001031853 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr3-3412 chr3 88219385 88219595 + 10.0 0.000 Intergenic LTR41|LTR|ERVL 69531 NM_173824 285237 Hs.476944 NM_173824 ENSG00000179021 C3orf38 - chromosome 3 open reading frame 38 protein-coding chr10-3167 chr10 78494195 78494405 + 10.0 0.000 Intergenic L1MD1|LINE|L1 226958 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr2-7292 chr2 236874066 236874276 + 10.0 0.000 Intergenic Intergenic 181996 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr18-1984 chr18 39798877 39799087 + 10.0 0.000 Intergenic MER61-int|LTR|ERV1 -42727 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr2-3412 chr2 47191688 47191898 + 10.0 0.000 TTS (NR_110208) TTS (NR_110208) -14857 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr7-9108 chr7 106808510 106808720 + 10.0 0.000 Intergenic MER4B|LTR|ERV1 -56667 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr20-1638 chr20 19263618 19263828 + 10.0 0.000 intron (NR_024564, intron 4 of 7) intron (NR_024564, intron 4 of 7) 20873 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr4-1444 chr4 118867909 118868119 + 10.0 0.000 intron (NM_001286754, intron 1 of 4) intron (NM_001286754, intron 1 of 4) 17333 NM_001286754 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr8-1715 chr8 129411526 129411736 + 10.0 0.000 intron (NR_130920, intron 1 of 3) intron (NR_130920, intron 1 of 3) 72511 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA chr10-2960 chr10 52121852 52122062 + 10.0 0.000 intron (NM_001098512, intron 7 of 17) MSTD-int|LTR|ERVL-MaLR 192171 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr1-3731 chr1 230067682 230067892 + 10.0 0.000 intron (NM_004481, intron 1 of 15) CpG 549 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr13-915 chr13 51520446 51520656 + 10.0 0.000 Intergenic Intergenic -32038 NR_039852 100616423 NR_039852 ENSG00000266611 MIR4703 - microRNA 4703 ncRNA chr4-5078 chr4 146165980 146166190 + 10.0 0.000 Intergenic L1MB1|LINE|L1 -9633 NM_007080 11157 Hs.190520 NM_007080 ENSG00000164167 LSM6 YDR378C LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr14-5197 chr14 95057920 95058130 + 10.0 0.000 Intergenic Intergenic 75478 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr10-2800 chr10 133418885 133419095 + 10.0 0.000 intron (NM_138384, intron 9 of 10) intron (NM_138384, intron 9 of 10) 5627 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chr1-5606 chr1 11561139 11561349 + 10.0 0.000 Intergenic Intergenic -48287 NR_104624 101929181 Hs.568616 NR_104624 ENSG00000235643 LINC01647 - long intergenic non-protein coding RNA 1647 ncRNA chr9-4694 chr9 125600209 125600419 + 10.0 0.000 intron (NM_001006619, intron 4 of 10) intron (NM_001006619, intron 4 of 10) 106894 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr15-1673 chr15 41920271 41920481 + 10.0 0.000 intron (NM_139265, intron 3 of 5) intron (NM_139265, intron 3 of 5) -1041 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr6-3062 chr6 72580408 72580618 + 10.0 0.000 Intergenic Intergenic -41330 NM_001160130 56479 Hs.445324 NM_019842 ENSG00000185760 KCNQ5 Kv7.5|MRD46 potassium voltage-gated channel subfamily Q member 5 protein-coding chr2-5709 chr2 213238836 213239046 + 10.0 0.000 Intergenic Intergenic 45268 NR_144752 100130451 Hs.608433 NR_144752 SPAG16-DT - SPAG16 divergent transcript ncRNA chrX-1025 chrX 68428380 68428590 + 10.0 0.000 intron (NM_002547, intron 2 of 24) L2b|LINE|L2 5010 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr4-5094 chr4 147683225 147683435 + 10.0 0.000 intron (NM_001350142, intron 1 of 12) L2|LINE|L2 833 NM_138364 90826 Hs.591692 NM_138364 ENSG00000164169 PRMT9 PRMT10 protein arginine methyltransferase 9 protein-coding chr1-14508 chr1 50441662 50441872 + 10.0 0.000 intron (NM_007051, intron 18 of 18) intron (NM_007051, intron 18 of 18) -18324 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr6-2674 chr6 9516253 9516463 + 10.0 0.000 Intergenic Intergenic 864149 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr7-7574 chr7 122792232 122792442 + 10.0 0.000 intron (NM_001167940, intron 1 of 29) MLT1A0|LTR|ERVL-MaLR -89415 NM_198085 378925 Hs.675191 NM_198085 ENSG00000235631 RNF148 - ring finger protein 148 protein-coding chr7-4817 chr7 98869634 98869844 + 10.0 0.000 intron (NM_152913, intron 1 of 7) CpG 275 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr11-5327 chr11 58769983 58770193 + 10.0 0.000 Intergenic L1PA14|LINE|L1 -38114 NM_005838 10249 Hs.145384 NM_005838 ENSG00000149124 GLYAT ACGNAT|CAT|GAT glycine-N-acyltransferase protein-coding chr7-3182 chr7 101514694 101514904 + 10.0 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 54207 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr9-2645 chr9 33373317 33373527 + 10.0 0.000 Intergenic Intergenic 29146 NM_001170 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr13-2618 chr13 76775017 76775227 + 10.0 0.000 Intergenic Intergenic 111283 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr7-3210 chr7 130380427 130380637 + 10.0 0.000 promoter-TSS (NM_001868) promoter-TSS (NM_001868) 38 NM_001868 1357 Hs.2879 NM_001868 ENSG00000091704 CPA1 CPA carboxypeptidase A1 protein-coding chr2-6220 chr2 26810580 26810790 + 10.0 0.000 Intergenic Intergenic 24629 NM_001809 1058 Hs.1594 NM_001809 ENSG00000115163 CENPA CENP-A|CenH3 centromere protein A protein-coding chr2-7987 chr2 65953272 65953482 + 10.0 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 404951 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr2-5799 chr2 230691180 230691390 + 10.0 0.000 non-coding (NR_040038, exon 4 of 4) non-coding (NR_040038, exon 4 of 4) 9244 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr5-3626 chr5 136229443 136229653 + 10.0 0.000 intron (NR_133682, intron 1 of 3) MLT1B|LTR|ERVL-MaLR 2893 NR_133682 106478968 Hs.637713 NR_133682 ENSG00000250947 TRPC7-AS2 CTB-28J9.2 TRPC7 antisense RNA 2 ncRNA chr9-5174 chr9 68899108 68899318 + 10.0 0.000 intron (NM_003558, intron 8 of 15) L2c|LINE|L2 76628 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chr10-4414 chr10 62145127 62145337 + 10.0 0.000 Intergenic L1ME3|LINE|L1 95875 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr20-2058 chr20 9200648 9200858 + 10.0 0.000 intron (NM_001172646, intron 1 of 37) L2a|LINE|L2 -16637 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr17-3568 chr17 79819024 79819234 + 10.0 0.000 Intergenic Intergenic -4323 NR_146504 105371919 NR_146504 ENSG00000262772 LINC01977 - long intergenic non-protein coding RNA 1977 ncRNA chr4-2882 chr4 76948946 76949156 + 10.0 0.000 promoter-TSS (NM_018243) promoter-TSS (NM_018243) -701 NM_001306147 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr10-1401 chr10 79261212 79261422 + 10.0 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -86152 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr2-3722 chr2 231877721 231877931 + 10.0 0.000 Intergenic Intergenic 14472 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr7-1526 chr7 74211421 74211631 + 10.0 0.000 intron (NM_014146, intron 1 of 12) AluY|SINE|Alu 1520 NM_032463 7462 Hs.741249 NM_014146 ENSG00000086730 LAT2 HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 linker for activation of T cells family member 2 protein-coding chr14-2941 chr14 45506105 45506315 + 10.0 0.000 Intergenic L3|LINE|CR1 209392 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr19-1111 chr19 12722100 12722310 + 10.0 0.000 promoter-TSS (NM_013433) promoter-TSS (NM_013433) 54 NM_013433 30000 Hs.416049 NM_013433 ENSG00000105576 TNPO2 IPO3|KPNB2B|TRN2 transportin 2 protein-coding chr9-6351 chr9 15086119 15086329 + 10.0 0.000 Intergenic MER57A1|LTR|ERV1 92897 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chrX-4429 chrX 54248420 54248630 + 10.0 0.000 intron (NM_001002838, intron 17 of 22) intron (NM_001002838, intron 17 of 22) -65271 NM_001300788 54954 Hs.86045 NM_017848 ENSG00000184083 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding chr11-5592 chr11 111320800 111321010 + 10.0 0.000 Intergenic Intergenic -15857 NM_001302644 399948 Hs.729225 NM_207429 COLCA1 C11orf92|CASC12|LOH11CR1F colorectal cancer associated 1 protein-coding chr17-3476 chr17 43994252 43994462 + 10.0 0.000 intron (NM_004160, intron 1 of 6) intron (NM_004160, intron 1 of 6) 10112 NM_004160 5697 Hs.169249 NM_004160 ENSG00000131096 PYY PYY-I|PYY1 peptide YY protein-coding chr12-6510 chr12 108144769 108144979 + 10.0 0.000 intron (NM_001304447, intron 1 of 9) MIRb|SINE|MIR 13088 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr9-2551 chr9 130364543 130364753 + 10.0 0.000 intron (NM_001291815, intron 40 of 97) intron (NM_001291815, intron 40 of 97) -80059 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr1-10749 chr1 199441309 199441519 + 10.0 0.000 Intergenic Intergenic 292816 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr3-7142 chr3 185131866 185132076 + 10.0 0.000 intron (NM_001025266, intron 1 of 1) L1MEd|LINE|L1 21089 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr14-2858 chr14 30863299 30863509 + 10.0 0.000 Intergenic L3b|LINE|CR1 -11131 NM_001347720 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr3-5451 chr3 179450120 179450330 + 10.0 0.000 intron (NM_021629, intron 1 of 9) intron (NM_021629, intron 1 of 9) 1245 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr3-2712 chr3 73716531 73716741 + 10.0 0.000 Intergenic L2a|LINE|L2 -91695 NM_015009 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr8-2847 chr8 132062488 132062698 + 10.0 0.000 3' UTR (NM_001145095, exon 16 of 16) 3' UTR (NM_001145095, exon 16 of 16) -3211 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr5-8193 chr5 105812352 105812562 + 10.0 0.000 Intergenic Intergenic 712983 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr7-8231 chr7 34225416 34225626 + 10.0 0.000 Intergenic Intergenic 319982 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr5-2302 chr5 55456264 55456474 + 10.0 0.000 intron (NR_103485, intron 4 of 6) intron (NR_103485, intron 4 of 6) 52557 NR_049869 100847019 NR_049869 ENSG00000265135 MIR5687 - microRNA 5687 ncRNA chr10-5604 chr10 93638603 93638813 + 10.0 0.000 intron (NM_006204, intron 11 of 21) intron (NM_006204, intron 11 of 21) 26171 NM_006204 5146 Hs.658121 NM_006204 ENSG00000095464 PDE6C ACHM5|COD4|PDEA2 phosphodiesterase 6C protein-coding chr2-5365 chr2 96763648 96763858 + 10.0 0.000 intron (NM_020184, intron 1 of 6) intron (NM_020184, intron 1 of 6) 2851 NM_020184 26504 Hs.175043 NM_020184 ENSG00000158158 CNNM4 ACDP4 cyclin and CBS domain divalent metal cation transport mediator 4 protein-coding chr5-4026 chr5 35031489 35031699 + 10.0 0.000 intron (NM_031900, intron 7 of 13) intron (NM_031900, intron 7 of 13) 16355 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr12-3749 chr12 43525357 43525567 + 10.0 0.000 intron (NM_025003, intron 3 of 38) L1PB3|LINE|L1 26741 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr11-5976 chr11 18812779 18812989 + 10.0 0.000 Intergenic L2|LINE|L2 -20163 NM_001278236 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr19-2971 chr19 17739220 17739430 + 10.0 0.000 Intergenic L2b|LINE|L2 -8419 NM_001161358 23149 Hs.96485 NM_015122 ENSG00000130475 FCHO1 - FCH domain only 1 protein-coding chr9-3589 chr9 77961418 77961628 + 10.0 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 70288 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr6-4003 chr6 117548874 117549084 + 10.0 0.000 non-coding (NR_158983, exon 14 of 14) non-coding (NR_158983, exon 14 of 14) 53532 NM_001017408 57120 Hs.191539 NM_020399 ENSG00000047932 GOPC CAL|FIG|GOPC1|PIST|dJ94G16.2 golgi associated PDZ and coiled-coil motif containing protein-coding chr19-4851 chr19 38443709 38443919 + 10.0 0.000 intron (NM_001042723, intron 5 of 104) intron (NM_001042723, intron 5 of 104) 10114 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr9-8872 chr9 136101017 136101227 + 10.0 0.000 Intergenic Intergenic -5833 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr12-2150 chr12 110406669 110406879 + 10.0 0.000 Intergenic HERVH-int|LTR|ERV1 -3044 NM_016238 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr11-3873 chr11 84259229 84259439 + 10.0 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) 13946 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr13-905 chr13 47337986 47338196 + 10.0 0.000 Intergenic L1PB1|LINE|L1 -441015 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr7-9107 chr7 106770188 106770398 + 10.0 0.000 Intergenic L3|LINE|CR1 -94989 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr22-1161 chr22 20618921 20619131 + 10.0 0.000 Intergenic L1MC4|LINE|L1 -70529 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin like 4, pseudogene pseudo chr5-4125 chr5 81359328 81359538 + 10.0 0.000 intron (NM_130767, intron 5 of 14) intron (NM_130767, intron 5 of 14) 34701 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr5-2956 chr5 157714311 157714521 + 10.0 0.000 Intergenic Intergenic -17004 NM_001317824 54974 Hs.353090 NM_017872 ENSG00000113272 THG1L ICF45|IHG-1|hTHG1 tRNA-histidine guanylyltransferase 1 like protein-coding chr14-1862 chr14 73977735 73977945 + 10.0 0.000 intron (NM_001249, intron 6 of 15) intron (NM_001249, intron 6 of 15) 27538 NM_182476 51004 Hs.131555 NM_182476 ENSG00000119723 COQ6 CGI-10|CGI10|COQ10D6 coenzyme Q6, monooxygenase protein-coding chr13-3337 chr13 69502787 69502997 + 10.0 0.000 Intergenic HERVL-int|LTR|ERVL 280546 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr1-10868 chr1 205485491 205485701 + 10.0 0.000 Intergenic Intergenic -19073 NM_212502 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr19-1640 chr19 3428509 3428719 + 10.0 0.000 intron (NM_001245002, intron 3 of 10) intron (NM_001245002, intron 3 of 10) 51911 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr20-1606 chr20 9059931 9060141 + 10.0 0.000 Intergenic AluSz|SINE|Alu -9018 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr4-3356 chr4 6591570 6591780 + 10.0 0.000 intron (NM_001292038, intron 5 of 18) LTR53B|LTR|ERVL 16486 NM_015274 23324 Hs.188464 NM_015274 ENSG00000013288 MAN2B2 - mannosidase alpha class 2B member 2 protein-coding chr12-4959 chr12 74109569 74109779 + 10.0 0.000 Intergenic L1PREC2|LINE|L1 182957 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr4-3563 chr4 597718 597928 + 10.0 0.000 Intergenic AluYh3|SINE|Alu 20655 NR_148199 105374338 Hs.518426 NR_148199 ENSG00000283183 LOC105374338 - uncharacterized LOC105374338 ncRNA chr17-3967 chr17 63987497 63987707 + 10.0 0.000 Intergenic Intergenic -10749 NM_001191031 92340 Hs.708161 NM_001164257 ENSG00000224383 PRR29 C17orf72 proline rich 29 protein-coding chrX-2554 chrX 100732183 100732393 + 10.0 0.000 promoter-TSS (NM_001129896) promoter-TSS (NM_001129896) -167 NM_001370162 94121 Hs.592224 NM_080737 ENSG00000102362 SYTL4 SLP4 synaptotagmin like 4 protein-coding chr1-13101 chr1 185279446 185279656 + 10.0 0.000 intron (NM_017673, intron 18 of 18) intron (NM_017673, intron 18 of 18) 37692 NM_006469 10625 Hs.497183 NM_006469 ENSG00000116679 IVNS1ABP ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP influenza virus NS1A binding protein protein-coding chr5-2168 chr5 115602481 115602691 + 10.0 0.000 promoter-TSS (NM_021649) promoter-TSS (NM_021649) -107 NM_021649 353376 Hs.718838 NM_021649 ENSG00000243414 TICAM2 MyD88-4|TICAM-2|TIRAP3|TIRP|TRAM toll like receptor adaptor molecule 2 protein-coding chr4-7772 chr4 94976791 94977001 + 10.0 0.000 intron (NM_001203, intron 2 of 12) MLT1G-int|LTR|ERVL-MaLR -19336 NM_001256792 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr2-3513 chr2 226835835 226836045 + 10.0 0.000 promoter-TSS (NM_001167608) promoter-TSS (NM_001167608) -114 NM_001349072 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding chr22-1411 chr22 41022752 41022962 + 10.0 0.000 Intergenic CpG 50864 NR_132979 106635682 NR_132979 SNORD140 - small nucleolar RNA, C/D box 140 snoRNA chr16-1388 chr16 83965380 83965590 + 10.0 0.000 exon (NM_182981, exon 6 of 6) exon (NM_182981, exon 6 of 6) -3147 NM_019065 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr16-3138 chr16 73710741 73710951 + 10.0 0.000 Intergenic Intergenic 324041 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr16-3094 chr16 67412423 67412633 + 10.0 0.000 intron (NM_001323627, intron 1 of 11) intron (NM_001323627, intron 1 of 11) 3949 NM_001323627 29800 Hs.624541 NM_013304 ENSG00000159714 ZDHHC1 C16orf1|DHHC-1|HSU90653|ZNF377 zinc finger DHHC-type containing 1 protein-coding chr1-1679 chr1 65793223 65793433 + 10.0 0.000 intron (NM_002600, intron 1 of 16) intron (NM_002600, intron 1 of 16) 433 NM_002600 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr11-3725 chr11 17537304 17537514 + 10.0 0.000 intron (NR_123738, intron 1 of 19) intron (NR_123738, intron 1 of 19) 7007 NM_005709 10083 Hs.502072 NM_005709 ENSG00000006611 USH1C AIE-75|DFNB18|DFNB18A|NY-CO-37|NY-CO-38|PDZ-45|PDZ-73|PDZ-73/NY-CO-38|PDZ73|PDZD7C|ush1cpst USH1 protein network component harmonin protein-coding chr17-1934 chr17 80008541 80008751 + 10.0 0.000 intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) 27226 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr2-9338 chr2 225649940 225650150 + 10.0 0.000 intron (NM_001371273, intron 6 of 7) intron (NM_001371273, intron 6 of 7) 249159 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr19-2867 chr19 14404005 14404215 + 10.0 0.000 intron (NM_001784, intron 10 of 17) AluSq2|SINE|Alu 15231 NM_005804 10212 Hs.311609 NM_005804 ENSG00000123136 DDX39A BAT1|BAT1L|DDX39|DDXL|URH49 DExD-box helicase 39A protein-coding chr6-862 chr6 36386798 36387008 + 10.0 0.000 intron (NM_001207035, intron 1 of 7) intron (NM_001207035, intron 1 of 7) 766 NM_016135 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr5-9111 chr5 173323201 173323411 + 10.0 0.000 exon (NM_003714, exon 3 of 4) exon (NM_003714, exon 3 of 4) 6197 NM_003714 8614 Hs.233160 NM_003714 ENSG00000113739 STC2 STC-2|STCRP stanniocalcin 2 protein-coding chr1-9006 chr1 10901549 10901759 + 10.0 0.000 Intergenic Intergenic 65033 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr19-3201 chr19 49097911 49098121 + 10.0 0.000 intron (NM_001301069, intron 4 of 9) intron (NM_001301069, intron 4 of 9) 12565 NM_001301069 6625 Hs.467097 NM_003089 ENSG00000104852 SNRNP70 RNPU1Z|RPU1|SNRP70|Snp1|U1-70K|U170K|U1AP|U1RNP small nuclear ribonucleoprotein U1 subunit 70 protein-coding chr6-2959 chr6 36623036 36623246 + 10.0 0.000 promoter-TSS (NR_037491) promoter-TSS (NR_037491) -629 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr7-2729 chr7 39898395 39898605 + 10.0 0.000 Intergenic Intergenic 50919 NR_158201 112267983 Hs.587424 NR_158201 LOC112267983 - uncharacterized LOC112267983 ncRNA chr20-4145 chr20 43964312 43964522 + 10.0 0.000 intron (NM_032883, intron 2 of 9) intron (NM_032883, intron 2 of 9) 18521 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr10-3649 chr10 99742174 99742384 + 10.0 0.000 intron (NM_015960, intron 3 of 8) L1MEc|LINE|L1 -9613 NM_078470 1355 Hs.28326 NM_004376 ENSG00000014919 COX15 CEMCOX2 cytochrome c oxidase assembly homolog COX15 protein-coding chr9-2527 chr9 123356252 123356462 + 10.0 0.000 intron (NM_173689, intron 1 of 12) intron (NM_173689, intron 1 of 12) 160 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr14-1677 chr14 73696974 73697184 + 10.0 0.000 3' UTR (NM_031427, exon 8 of 8) 3' UTR (NM_031427, exon 8 of 8) 17305 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding chr6-5668 chr6 101021480 101021690 + 10.0 0.000 Intergenic Intergenic -140213 NM_001284271 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr4-2301 chr4 48801981 48802191 + 10.0 0.000 Intergenic Intergenic -21787 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chr16-2979 chr16 14364318 14364528 + 10.0 0.000 intron (NR_131191, intron 1 of 1) L1MC5a|LINE|L1 5843 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr7-3611 chr7 32586800 32587010 + 10.0 0.000 3' UTR (NM_015060, exon 16 of 16) 3' UTR (NM_015060, exon 16 of 16) 91416 NM_015060 23080 Hs.128056 NM_015060 ENSG00000105778 AVL9 KIAA0241 AVL9 cell migration associated protein-coding chr11-2335 chr11 73367722 73367932 + 10.0 0.000 3' UTR (NM_014786, exon 21 of 21) 3' UTR (NM_014786, exon 21 of 21) -8572 NM_152222 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr14-2899 chr14 37473531 37473741 + 10.0 0.000 intron (NM_138731, intron 12 of 13) L1MC2|LINE|L1 121613 NM_004496 3169 Hs.163484 NM_004496 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding chr6-2392 chr6 146812715 146812925 + 10.0 0.000 intron (NM_024694, intron 35 of 35) LTR34|LTR|ERV1 -8996 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr7-8384 chr7 44958662 44958872 + 10.0 0.000 Intergenic L1MB7|LINE|L1 20248 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr19-4555 chr19 10541562 10541772 + 10.0 0.000 Intergenic MIR|SINE|MIR -2237 NR_104025 84971 Hs.512799 NM_032885 ENSG00000130734 ATG4D APG4-D|APG4D|AUTL4 autophagy related 4D cysteine peptidase protein-coding chr8-4628 chr8 133081673 133081883 + 10.0 0.000 intron (NM_001045556, intron 1 of 8) intron (NM_001045556, intron 1 of 8) 20824 NM_001282965 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr5-3395 chr5 142677508 142677718 + 10.0 0.000 intron (NM_001144935, intron 1 of 3) intron (NM_001144935, intron 1 of 3) 8067 NM_001354956 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr9-1916 chr9 136318686 136318896 + 10.0 0.000 Intergenic Intergenic 8532 NR_026964 26102 Hs.561893 NR_026964 ENSG00000262075 DKFZP434A062 - uncharacterized LOC26102 ncRNA chr13-1444 chr13 64095149 64095359 + 10.0 0.000 Intergenic L2a|LINE|L2 -19243 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr19-3183 chr19 45890258 45890468 + 10.0 0.000 3' UTR (NM_001012643, exon 3 of 3) 3' UTR (NM_001012643, exon 3 of 3) -4222 NM_015649 26145 Hs.515477 NM_015649 ENSG00000170604 IRF2BP1 - interferon regulatory factor 2 binding protein 1 protein-coding chr10-1701 chr10 34786341 34786551 + 10.0 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 28850 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr12-1986 chr12 124727352 124727562 + 10.0 0.000 Intergenic Intergenic 112214 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr3-4608 chr3 1287885 1288095 + 10.0 0.000 intron (NM_001349357, intron 5 of 20) MER41B|LTR|ERV1 194966 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr12-2892 chr12 47080481 47080691 + 10.0 0.000 promoter-TSS (NM_181847) promoter-TSS (NM_181847) -627 NM_001370299 347902 Hs.121520 NM_181847 ENSG00000139211 AMIGO2 ALI1|AMIGO-2|DEGA adhesion molecule with Ig like domain 2 protein-coding chr7-4675 chr7 39044815 39045025 + 10.0 0.000 intron (NM_007252, intron 2 of 10) X6A_LINE|LINE|CR1 -31353 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr3-5219 chr3 81550138 81550348 + 10.0 0.000 intron (NM_000158, intron 12 of 15) MER41-int|LTR|ERV1 211402 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding KZ208919.1-1 KZ208919.1 144274 144478 + 10.0 0.000 NA NA NA NA chr3-3655 chr3 127391132 127391342 + 10.0 0.000 promoter-TSS (NR_110147) promoter-TSS (NR_110147) -567 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr16-3554 chr16 55480440 55480650 + 10.0 0.000 promoter-TSS (NM_001302509) promoter-TSS (NM_001302509) 12 NM_001302509 4313 Hs.513617 NM_004530 ENSG00000087245 MMP2 CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1 matrix metallopeptidase 2 protein-coding chr14-3606 chr14 51672894 51673104 + 10.0 0.000 intron (NM_001267046, intron 1 of 13) L1ME1|LINE|L1 21089 NM_152330 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr1-9526 chr1 39178386 39178596 + 10.0 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 94324 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr6-4144 chr6 168308658 168308868 + 10.0 0.000 exon (NM_214462, exon 4 of 4) exon (NM_214462, exon 4 of 4) 11014 NM_214462 168002 Hs.673059 NM_214462 ENSG00000164488 DACT2 C6orf116|DAPPER2|DPR2|bA503C24.7 dishevelled binding antagonist of beta catenin 2 protein-coding chr2-11299 chr2 189764150 189764360 + 10.0 0.000 non-coding (NR_163942, exon 5 of 5) non-coding (NR_163942, exon 5 of 5) -1057 NM_001354347 64172 Hs.60772 NM_022353 ENSG00000128694 OSGEPL1 OSGEPL|Qri7 O-sialoglycoprotein endopeptidase like 1 protein-coding chr5-6660 chr5 55878902 55879112 + 10.0 0.000 intron (NM_001297572, intron 4 of 10) L1MB7|LINE|L1 25685 NM_001242639 133396 Hs.55378 NM_139017 ENSG00000164509 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding chr6-8347 chr6 147995223 147995433 + 10.0 0.000 Intergenic L1PA16|LINE|L1 -277000 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr20-832 chr20 15763413 15763623 + 10.0 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 159796 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr12-3193 chr12 52736723 52736933 + 10.0 0.000 Intergenic Intergenic -33304 NM_175078 374454 Hs.334989 NM_175078 ENSG00000189182 KRT77 K1B|KRT1B keratin 77 protein-coding chr10-3399 chr10 29861800 29862010 + 10.0 0.000 Intergenic Intergenic -124969 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr1-7225 chr1 223827101 223827311 + 10.0 0.000 intron (NM_005426, intron 1 of 18) L2a|LINE|L2 18741 NM_001031685 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr7-7875 chr7 5772123 5772333 + 10.0 0.000 intron (NM_207111, intron 1 of 16) AluSp|SINE|Alu 9435 NM_207111 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr2-7833 chr2 46796051 46796261 + 10.0 0.000 Intergenic Intergenic -20512 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr13-1295 chr13 44763615 44763825 + 10.0 0.000 Intergenic Intergenic 45910 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr5-1681 chr5 73817082 73817292 + 10.0 0.000 intron (NM_001244364, intron 1 of 27) intron (NM_001244364, intron 1 of 27) 3641 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr19-4635 chr19 15092115 15092325 + 10.0 0.000 Intergenic L2c|LINE|L2 5154 NM_001004713 126370 Hs.631610 NM_001004713 ENSG00000094661 OR1I1 OR19-20|OR1I1P|OR1I1Q olfactory receptor family 1 subfamily I member 1 protein-coding chr16-4649 chr16 74709591 74709801 + 10.0 0.000 Intergenic Intergenic -8834 NM_001142497 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr3-3806 chr3 15387318 15387528 + 10.0 0.000 Intergenic MER41B|LTR|ERV1 40121 NM_001330662 131965 Hs.149487 NM_152396 ENSG00000206562 METTL6 - methyltransferase like 6 protein-coding chr21-1026 chr21 21343926 21344136 + 10.0 0.000 intron (NM_001352592, intron 9 of 18) L1MA1|LINE|L1 196869 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr2-3076 chr2 108928484 108928694 + 10.0 0.000 intron (NM_022336, intron 4 of 11) intron (NM_022336, intron 4 of 11) 60631 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr17-4306 chr17 79646475 79646685 + 10.0 0.000 Intergenic THE1B|LTR|ERVL-MaLR -35529 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr9-6178 chr9 85094915 85095125 + 10.0 0.000 Intergenic AluSx1|SINE|Alu 389119 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr3-1193 chr3 11770464 11770674 + 10.0 0.000 Intergenic Charlie19a|DNA|hAT-Charlie -50030 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr11-5551 chr11 98267897 98268107 + 10.0 0.000 Intergenic THE1C|LTR|ERVL-MaLR -752947 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr4-4492 chr4 57647533 57647743 + 10.0 0.000 Intergenic Intergenic 221766 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr5-1617 chr5 71887716 71887926 + 10.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 168546 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr16-3606 chr16 81561263 81561473 + 10.0 0.000 intron (NM_030629, intron 1 of 20) L2a|LINE|L2 27466 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr9-5260 chr9 79362472 79362682 + 10.0 0.000 Intergenic Intergenic -209196 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr3-8129 chr3 24558577 24558787 + 10.0 0.000 Intergenic Intergenic -62974 NM_001354708 7068 Hs.187861 NM_000461 ENSG00000151090 THRB C-ERBA-2|C-ERBA-BETA|ERBA2|GRTH|NR1A2|PRTH|THR1|THRB1|THRB2 thyroid hormone receptor beta protein-coding chr1-8002 chr1 214454791 214455001 + 10.0 0.000 intron (NM_005401, intron 2 of 18) intron (NM_005401, intron 2 of 18) 96706 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr1-5520 chr1 200296211 200296421 + 10.0 0.000 Intergenic Intergenic 77476 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr18-2085 chr18 49207408 49207618 + 10.0 0.000 intron (NM_001353210, intron 13 of 16) MLT2C2|LTR|ERVL -157745 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr6-719 chr6 109188016 109188226 + 10.0 0.000 intron (NR_152435, intron 4 of 45) intron (NR_152435, intron 4 of 45) 22290 NR_152435 221262 Hs.373914 NM_173671 ENSG00000203799 CCDC162P C6orf183|C6orf184|C6orf185|CCDC162 coiled-coil domain containing 162, pseudogene pseudo chr8-3335 chr8 37977137 37977347 + 10.0 0.000 Intergenic AluSz|SINE|Alu -10643 NM_000025 155 Hs.2549 NM_000025 ENSG00000188778 ADRB3 BETA3AR adrenoceptor beta 3 protein-coding chr6-7952 chr6 111813219 111813429 + 10.0 0.000 intron (NM_153047, intron 2 of 13) intron (NM_153047, intron 2 of 13) -53407 NM_001370529 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr12-2676 chr12 56238243 56238453 + 10.0 0.000 TTS (NM_001135195) TTS (NM_001135195) 7631 NM_001135195 283375 Hs.591018 NM_173596 ENSG00000139540 SLC39A5 LZT-Hs7|MYP24|ZIP5 solute carrier family 39 member 5 protein-coding chr10-6948 chr10 63201973 63202183 + 10.0 0.000 intron (NM_001322258, intron 9 of 24) AluSz6|SINE|Alu 67145 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr3-2848 chr3 30493926 30494136 + 10.0 0.000 Intergenic Intergenic -24837 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chrX-692 chrX 45507077 45507287 + 10.0 0.000 intron (NR_104644, intron 1 of 3) intron (NR_104644, intron 1 of 3) 1794 NR_104645 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA chr9-8122 chr9 100137020 100137230 + 10.0 0.000 intron (NR_134606, intron 3 of 16) intron (NR_134606, intron 3 of 16) 37882 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding chr10-5319 chr10 71002364 71002574 + 10.0 0.000 Intergenic Intergenic 63416 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr7-5724 chr7 71641988 71642198 + 10.0 0.000 intron (NM_022479, intron 6 of 10) intron (NM_022479, intron 6 of 10) -334323 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr4-3141 chr4 177484606 177484816 + 10.0 0.000 Intergenic Intergenic -42208 NR_033655 175 Hs.207776 NM_000027 ENSG00000038002 AGA AGU|ASRG|GA aspartylglucosaminidase protein-coding chr4-2195 chr4 122341942 122342152 + 10.0 0.000 intron (NM_015312, intron 70 of 83) L2|LINE|L2 -36964 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding chr1-6787 chr1 84819765 84819975 + 10.0 0.000 intron (NM_012152, intron 2 of 2) intron (NM_012152, intron 2 of 2) 73336 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding chr2-4849 chr2 85506579 85506789 + 10.0 0.000 Intergenic Intergenic 32202 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr6-4938 chr6 100808935 100809145 + 10.0 0.000 intron (NM_006828, intron 4 of 41) Tigger3b|DNA|TcMar-Tigger 72289 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr5-2418 chr5 112686114 112686324 + 10.0 0.000 Intergenic Intergenic -3331 NR_104673 102467216 Hs.174158 NR_104673 LOC102467216 - uncharacterized LOC102467216 ncRNA chr6-4272 chr6 11258037 11258247 + 10.0 0.000 intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) -25460 NM_001271033 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr12-4151 chr12 82128035 82128245 + 10.0 0.000 Intergenic Intergenic 174421 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LINC02426 - long intergenic non-protein coding RNA 2426 ncRNA chr3-2424 chr3 4583574 4583784 + 10.0 0.000 intron (NM_001168272, intron 4 of 60) intron (NM_001168272, intron 4 of 60) 90331 NM_002222 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr15-2855 chr15 41392880 41393090 + 10.0 0.000 intron (NM_016013, intron 3 of 4) L2a|LINE|L2 9511 NM_016013 51103 Hs.106529 NM_016013 ENSG00000137806 NDUFAF1 CGI-65|CGI65|CIA30|MC1DN11 NADH:ubiquinone oxidoreductase complex assembly factor 1 protein-coding chr2-6489 chr2 173120947 173121157 + 10.0 0.000 intron (NM_133646, intron 2 of 11) ERVL-E-int|LTR|ERVL 45206 NM_016653 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr3-3558 chr3 49697486 49697696 + 10.0 0.000 intron (NM_022064, intron 5 of 38) intron (NM_022064, intron 5 of 38) 8034 NM_022064 63891 Hs.553723 NM_022064 ENSG00000164068 RNF123 FP1477|KPC1 ring finger protein 123 protein-coding chr5-4051 chr5 43277400 43277610 + 10.0 0.000 intron (NR_072980, intron 3 of 3) intron (NR_072980, intron 3 of 3) 35676 NM_001330663 3157 Hs.397729 NM_002130 ENSG00000112972 HMGCS1 HMGCS 3-hydroxy-3-methylglutaryl-CoA synthase 1 protein-coding chr5-5266 chr5 121642728 121642938 + 10.0 0.000 Intergenic THE1B|LTR|ERVL-MaLR -209049 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr21-1530 chr21 45709339 45709549 + 10.0 0.000 intron (NM_001348238, intron 2 of 16) intron (NM_001348238, intron 2 of 16) -38570 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr2-3795 chr2 19355790 19356000 + 10.0 0.000 intron (NM_145260, intron 1 of 2) intron (NM_145260, intron 1 of 2) 2728 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr8-6116 chr8 28456321 28456531 + 10.0 0.000 intron (NM_001258211, intron 4 of 7) intron (NM_001258211, intron 4 of 7) 33803 NM_172366 157574 Hs.741522 NM_172366 ENSG00000214050 FBXO16 FBX16 F-box protein 16 protein-coding chr16-3264 chr16 88358230 88358440 + 10.0 0.000 Intergenic Intergenic -69136 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr5-4076 chr5 60180574 60180784 + 10.0 0.000 intron (NM_001349243, intron 2 of 16) intron (NM_001349243, intron 2 of 16) 191984 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr4-2846 chr4 54498812 54499022 + 10.0 0.000 Intergenic Intergenic 108214 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr1-10874 chr1 205926414 205926624 + 10.0 0.000 intron (NM_052934, intron 12 of 20) intron (NM_052934, intron 12 of 20) -8394 NR_110984 103021296 Hs.613648 NR_110983 SLC26A9-AS1 - SLC26A9 and RAB7B antisense RNA 1 ncRNA chr16-4455 chr16 55242417 55242627 + 10.0 0.000 Intergenic LTR1A1|LTR|ERV1 -82037 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr3-8024 chr3 192795146 192795356 + 10.0 0.000 Intergenic Intergenic -67710 NM_004113 2257 Hs.390250 NM_004113 ENSG00000114279 FGF12 EIEE47|FGF12B|FHF1 fibroblast growth factor 12 protein-coding chrX-4800 chrX 99890357 99890567 + 10.0 0.000 Intergenic L1MA8|LINE|L1 519811 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-2375 chr8 41466663 41466873 + 10.0 0.000 Intergenic Intergenic -23628 NM_001362979 51125 Hs.654773 NM_016099 ENSG00000147533 GOLGA7 GCP16|GOLGA3AP1|GOLGA7A|HSPC041 golgin A7 protein-coding chr2-6418 chr2 141515971 141516181 + 10.0 0.000 intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 615625 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr3-3746 chr3 1331009 1331219 + 10.0 0.000 intron (NM_001289080, intron 11 of 22) intron (NM_001289080, intron 11 of 22) 238090 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr17-7006 chr17 51858437 51858647 + 10.0 0.000 intron (NM_001082533, intron 4 of 9) intron (NM_001082533, intron 4 of 9) 300172 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr11-4047 chr11 12582187 12582397 + 10.0 0.000 Intergenic LTR16D|LTR|ERVL -92129 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr1-12771 chr1 75793766 75793976 + 10.0 0.000 intron (NM_004582, intron 7 of 8) intron (NM_004582, intron 7 of 8) -3011 NM_002440 4438 Hs.216639 NM_002440 ENSG00000057468 MSH4 - mutS homolog 4 protein-coding chr3-3077 chr3 133976563 133976773 + 10.0 0.000 intron (NM_005630, intron 2 of 13) intron (NM_005630, intron 2 of 13) -46856 NR_161373 80111 Hs.287691 NM_025041 ENSG00000174640 C3orf36 - chromosome 3 open reading frame 36 ncRNA chr12-4541 chr12 26193690 26193900 + 10.0 0.000 Intergenic Intergenic -1541 NM_001135823 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr14-2550 chr14 26989166 26989376 + 10.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 80629 NR_036193 100423019 NR_036193 ENSG00000265165 MIR4307 - microRNA 4307 ncRNA chr17-2467 chr17 48788944 48789154 + 10.0 0.000 intron (NM_001130918, intron 10 of 15) intron (NM_001130918, intron 10 of 15) 5275 NM_173623 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr1-8601 chr1 185720787 185720997 + 10.0 0.000 Intergenic Intergenic -13499 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr13-1574 chr13 36686077 36686287 + 10.0 0.000 intron (NM_203451, intron 1 of 1) intron (NM_203451, intron 1 of 1) 12162 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr22-4109 chr22 43699088 43699298 + 10.0 0.000 intron (NM_198856, intron 8 of 29) LTR33|LTR|ERVL 113112 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr10-7597 chr10 19921690 19921900 + 10.0 0.000 intron (NM_032812, intron 1 of 13) MER91A|DNA|hAT-Tip100 105363 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr8-6307 chr8 43272424 43272634 + 10.0 0.000 Intergenic MSTA|LTR|ERVL-MaLR -19913 NM_001005365 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr11-4538 chr11 119684814 119685024 + 10.0 0.000 intron (NM_203285, intron 1 of 7) intron (NM_203285, intron 1 of 7) 44281 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr2-2688 chr2 20071994 20072204 + 10.0 0.000 Intergenic Intergenic -20471 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr11-1356 chr11 63934599 63934809 + 10.0 0.000 Intergenic Intergenic -4298 NM_024771 79829 Hs.523753 NM_024771 ENSG00000110583 NAA40 NAT11|NatD|PATT1|hNatD N(alpha)-acetyltransferase 40, NatD catalytic subunit protein-coding chr9-4659 chr9 117650923 117651133 + 10.0 0.000 intron (NR_109806, intron 2 of 5) intron (NR_109806, intron 2 of 5) 2422 NR_109806 101928797 Hs.382317 NR_109806 ENSG00000233569 LOC101928797 - uncharacterized LOC101928797 ncRNA chr10-6230 chr10 60224119 60224329 + 10.0 0.000 intron (NM_001204403, intron 9 of 43) intron (NM_001204403, intron 9 of 43) -83208 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding KI270519.1-3 KI270519.1 81210 81420 + 10.0 0.000 NA NA NA NA chr8-2485 chr8 142924160 142924370 + 10.0 0.000 Intergenic Intergenic -6422 NM_000498 1585 Hs.632054 NM_000498 ENSG00000179142 CYP11B2 ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo cytochrome P450 family 11 subfamily B member 2 protein-coding chr12-3048 chr12 4664245 4664455 + 10.0 0.000 intron (NM_005002, intron 6 of 10) MLT1B-int|LTR|ERVL-MaLR 15236 NM_005002 4704 Hs.75227 NM_005002 ENSG00000139180 NDUFA9 CC6|CI-39k|CI39k|COQ11|MC1DN26|NDUFS2L|SDR22E1 NADH:ubiquinone oxidoreductase subunit A9 protein-coding chr2-2684 chr2 1792128 1792338 + 10.0 0.000 3' UTR (NM_001329852, exon 24 of 24) 3' UTR (NM_001329852, exon 24 of 24) -47718 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-3713 chr2 224722273 224722483 + 10.0 0.000 Intergenic Intergenic -136981 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr19-2545 chr19 45073450 45073660 + 10.0 0.000 intron (NM_145288, intron 2 of 2) AluYm1|SINE|Alu -2072 NM_001319055 79760 Hs.466919 NM_024707 ENSG00000142252 GEMIN7 SIP3 gem nuclear organelle associated protein 7 protein-coding chrX-1743 chrX 43537569 43537779 + 10.0 0.000 Intergenic MER34A|LTR|ERV1 -117233 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr1-6702 chr1 54794589 54794799 + 10.0 0.000 intron (NM_001114108, intron 1 of 6) MIRb|SINE|MIR 6629 NM_001114108 55001 Hs.16230 NM_017904 ENSG00000006555 TTC22 - tetratricopeptide repeat domain 22 protein-coding chr6-4063 chr6 137214645 137214855 + 10.0 0.000 intron (NM_000416, intron 1 of 6) intron (NM_000416, intron 1 of 6) 4446 NM_001363526 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr2-5108 chr2 18950334 18950544 + 10.0 0.000 Intergenic Intergenic 76532 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr13-2681 chr13 86695591 86695801 + 10.0 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -216224 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr12-3787 chr12 54636380 54636590 + 10.0 0.000 Intergenic Intergenic -1590 NM_033277 90070 Hs.307096 NM_033277 ENSG00000135413 LACRT - lacritin protein-coding chr11-4677 chr11 63556524 63556734 + 10.0 0.000 intron (NM_017878, intron 3 of 3) intron (NM_017878, intron 3 of 3) 6750 NM_017878 54979 Hs.272805 NM_017878 ENSG00000133328 PLAAT2 HRASLS2|PLA1/2-2|PLAAT-2 phospholipase A and acyltransferase 2 protein-coding chr5-9027 chr5 168114492 168114702 + 10.0 0.000 intron (NM_001368145, intron 8 of 26) intron (NM_001368145, intron 8 of 26) -51248 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr8-2574 chr8 42015186 42015396 + 10.0 0.000 intron (NM_001305878, intron 2 of 13) intron (NM_001305878, intron 2 of 13) -36459 NR_136589 105379393 Hs.742878 NR_136589 LOC105379393 - uncharacterized LOC105379393 ncRNA chr2-4790 chr2 38075913 38076123 + 10.0 0.000 5' UTR (NM_000104, exon 1 of 3) 5' UTR (NM_000104, exon 1 of 3) 163 NM_000104 1545 Hs.154654 NM_000104 ENSG00000138061 CYP1B1 ASGD6|CP1B|CYPIB1|GLC3A|P4501B1 cytochrome P450 family 1 subfamily B member 1 protein-coding chr2-5923 chr2 20111899 20112109 + 10.0 0.000 Intergenic Intergenic -60376 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr14-2946 chr14 47817391 47817601 + 10.0 0.000 Intergenic L1PB1|LINE|L1 -22482 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr12-2120 chr12 71521872 71522082 + 10.0 0.000 intron (NR_110596, intron 2 of 19) intron (NR_110596, intron 2 of 19) 82179 NM_001277227 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding chr19-1360 chr19 53196868 53197078 + 10.0 0.000 Intergenic CpG -3615 NM_024733 79788 Hs.745230 NM_024733 ENSG00000197497 ZNF665 ZFP160L zinc finger protein 665 protein-coding chr10-1541 chr10 91162686 91162896 + 10.0 0.000 promoter-TSS (NR_046435) promoter-TSS (NR_046435) -221 NM_001257101 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr5-4175 chr5 107147646 107147856 + 10.0 0.000 Intergenic Intergenic -136737 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr11-2683 chr11 74950137 74950347 + 10.0 0.000 intron (NM_014752, intron 1 of 4) MIR3|SINE|MIR 976 NM_014752 9789 Hs.282700 NM_014752 ENSG00000118363 SPCS2 - signal peptidase complex subunit 2 protein-coding chr18-1168 chr18 13998923 13999133 + 10.0 0.000 Intergenic Intergenic -83321 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding chr1-12298 chr1 237185503 237185713 + 10.0 0.000 intron (NM_001035, intron 1 of 104) intron (NM_001035, intron 1 of 104) 143424 NM_001035 6262 Hs.109514 NM_001035 ENSG00000198626 RYR2 ARVC2|ARVD2|RYR-2|RyR|VTSIP ryanodine receptor 2 protein-coding chr2-7380 chr2 5559273 5559483 + 10.0 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 131740 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr1-7560 chr1 203031327 203031537 + 10.0 0.000 intron (NM_001304331, intron 1 of 29) intron (NM_001304331, intron 1 of 29) 4941 NM_001304332 8497 Hs.153648 NM_015053 ENSG00000143847 PPFIA4 - PTPRF interacting protein alpha 4 protein-coding chr1-4663 chr1 204675693 204675903 + 10.0 0.000 intron (NM_201630, intron 1 of 1) intron (NM_201630, intron 1 of 1) 9940 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr4-1963 chr4 138510230 138510440 + 10.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 200624 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr21-378 chr21 26967564 26967774 + 10.0 0.000 promoter-TSS (NM_007038) promoter-TSS (NM_007038) -581 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr14-4964 chr14 75074192 75074402 + 10.0 0.000 intron (NM_024643, intron 2 of 2) intron (NM_024643, intron 2 of 2) 4656 NM_001330191 79696 Hs.48642 NM_024643 ENSG00000119703 ZC2HC1C C14orf140|FAM164C zinc finger C2HC-type containing 1C protein-coding chr17-2111 chr17 4786404 4786614 + 10.0 0.000 promoter-TSS (NM_001144939) promoter-TSS (NM_001144939) -145 NM_001144940 284013 Hs.122561 NM_182566 ENSG00000182853 VMO1 ERGA6350|PRO21055 vitelline membrane outer layer 1 homolog protein-coding chr4-1387 chr4 140150853 140151063 + 10.0 0.000 intron (NM_018717, intron 1 of 4) CpG 3226 NM_018717 55534 Hs.586165 NM_018717 ENSG00000196782 MAML3 CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3|mam-3 mastermind like transcriptional coactivator 3 protein-coding chr3-4160 chr3 124960916 124961126 + 10.0 0.000 Intergenic Intergenic -26270 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr18-2221 chr18 66776042 66776252 + 10.0 0.000 Intergenic MLT2B2|LTR|ERVL -172057 NR_073130 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr2-9442 chr2 233795924 233796134 + 10.0 0.000 exon (NM_001367507, exon 10 of 42) exon (NM_001367507, exon 10 of 42) 20305 NM_001367507 339766 Hs.361778 NM_001287395 ENSG00000185038 MROH2A HEATR7B1 maestro heat like repeat family member 2A protein-coding chrX-1084 chrX 151023061 151023271 + 10.0 0.000 Intergenic MIRb|SINE|MIR 39781 NM_001301228 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr9-2497 chr9 95003900 95004110 + 10.0 0.000 intron (NM_032823, intron 9 of 14) intron (NM_032823, intron 9 of 14) -58451 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr7-6493 chr7 8141035 8141245 + 10.0 0.000 intron (NM_001350836, intron 11 of 14) intron (NM_001350836, intron 11 of 14) 120912 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr9-5888 chr9 131926200 131926410 + 10.0 0.000 intron (NM_004269, intron 4 of 7) intron (NM_004269, intron 4 of 7) 153562 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr18-1421 chr18 9684778 9684988 + 10.0 0.000 Intergenic Intergenic -23418 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr5-6772 chr5 85966265 85966475 + 10.0 0.000 Intergenic Intergenic -316074 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr18-1069 chr18 35042272 35042482 + 10.0 0.000 intron (NR_046177, intron 1 of 6) intron (NR_046177, intron 1 of 6) 964 NR_046177 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr5-4315 chr5 153731089 153731299 + 10.0 0.000 intron (NM_000827, intron 11 of 15) (TC)n|Simple_repeat|Simple_repeat 167793 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr5-2469 chr5 139197512 139197722 + 10.0 0.000 intron (NM_001037633, intron 1 of 10) intron (NM_001037633, intron 1 of 10) 751 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr4-1742 chr4 86092746 86092956 + 10.0 0.000 intron (NM_001363657, intron 8 of 13) intron (NM_001363657, intron 8 of 13) -26955 NR_110879 101929064 Hs.662221 NR_110879 ENSG00000250062 LOC101929064 - uncharacterized LOC101929064 ncRNA chr4-4233 chr4 17064413 17064623 + 10.0 0.000 Intergenic MER77B|LTR|ERVL 121539 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr16-4225 chr16 14298637 14298847 + 10.0 0.000 Intergenic (GCCAG)n|Simple_repeat|Simple_repeat -3546 NR_132983 100129781 Hs.190748 NR_132983 MIR193BHG - MIR193B host gene ncRNA chr4-3278 chr4 130675345 130675555 + 10.0 0.000 Intergenic Intergenic 299089 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr20-2096 chr20 24055227 24055437 + 10.0 0.000 Intergenic Intergenic -66553 NM_178311 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr12-2736 chr12 15701772 15701982 + 10.0 0.000 intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 87511 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr6-5473 chr6 160919833 160920043 + 10.0 0.000 Intergenic L1MC4a|LINE|L1 -71789 NM_001291958 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr10-3588 chr10 87705404 87705614 + 10.0 0.000 intron (NM_001015880, intron 1 of 12) L1ME2z|LINE|L1 45631 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr3-8072 chr3 9989939 9990149 + 10.0 0.000 intron (NR_103821, intron 2 of 2) AluYb8|SINE|Alu 3151 NR_103821 442075 Hs.690469 NM_001013730 EMC3-AS1 - EMC3 antisense RNA 1 ncRNA chr7-6418 chr7 156046748 156046958 + 10.0 0.000 Intergenic Intergenic 84221 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr1-7138 chr1 204422879 204423089 + 10.0 0.000 3' UTR (NM_002646, exon 34 of 34) 3' UTR (NM_002646, exon 34 of 34) -11167 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr10-3087 chr10 12768934 12769144 + 10.0 0.000 intron (NM_001351032, intron 6 of 11) intron (NM_001351032, intron 6 of 11) -43686 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr3-4631 chr3 17894472 17894682 + 10.0 0.000 Intergenic L1M1|LINE|L1 -67975 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr3-6911 chr3 157231272 157231482 + 10.0 0.000 Intergenic Intergenic -70617 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr8-3803 chr8 28034192 28034402 + 10.0 0.000 intron (NM_001010906, intron 13 of 18) intron (NM_001010906, intron 13 of 18) -41624 NM_173833 286133 Hs.591833 NM_173833 ENSG00000168079 SCARA5 NET33|Tesr scavenger receptor class A member 5 protein-coding chr14-4166 chr14 78232009 78232219 + 10.0 0.000 intron (NR_073547, intron 1 of 20) intron (NR_073547, intron 1 of 20) 61741 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr8-5673 chr8 119657762 119657972 + 10.0 0.000 intron (NM_001330600, intron 1 of 25) intron (NM_001330600, intron 1 of 25) 15523 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr11-4014 chr11 6695043 6695253 + 10.0 0.000 Intergenic Intergenic -11808 NM_022061 63875 Hs.523456 NM_022061 ENSG00000158042 MRPL17 L17mt|LIP2|MRP-L17|MRP-L26|RPL17L|RPML26 mitochondrial ribosomal protein L17 protein-coding chr7-8932 chr7 95861132 95861342 + 10.0 0.000 intron (NM_004411, intron 5 of 16) intron (NM_004411, intron 5 of 16) 88731 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr2-9555 chr2 240059715 240059925 + 10.0 0.000 Intergenic MER41D|LTR|ERV1 -13748 NM_173351 150681 Hs.626616 NM_173351 ENSG00000178586 OR6B3 OR6B3P|OR6B3Q olfactory receptor family 6 subfamily B member 3 protein-coding chr5-5447 chr5 138345561 138345771 + 10.0 0.000 intron (NM_001350194, intron 4 of 4) intron (NM_001350194, intron 4 of 4) -7019 NM_016604 51780 Hs.483486 NM_016604 ENSG00000120733 KDM3B 5qNCA|C5orf7|JMJD1B|NET22 lysine demethylase 3B protein-coding chr13-1064 chr13 31478055 31478265 + 10.0 0.000 Intergenic Intergenic -261366 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chrX-3966 chrX 12703628 12703838 + 10.0 0.000 intron (NM_001368400, intron 9 of 15) intron (NM_001368400, intron 9 of 15) -87622 NM_002765 5634 Hs.654581 NM_002765 ENSG00000101911 PRPS2 PRSII phosphoribosyl pyrophosphate synthetase 2 protein-coding chr12-5680 chr12 99515482 99515692 + 10.0 0.000 intron (NM_152788, intron 9 of 25) L1MA2|LINE|L1 -132166 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr6-4601 chr6 44245474 44245684 + 10.0 0.000 promoter-TSS (NM_001271970) promoter-TSS (NM_001271970) -587 NM_001271970 3326 Hs.509736 NM_007355 ENSG00000096384 HSP90AB1 D6S182|HSP84|HSP90B|HSPC2|HSPCB heat shock protein 90 alpha family class B member 1 protein-coding chrX-832 chrX 110394653 110394863 + 10.0 0.000 intron (NM_001171689, intron 2 of 7) MIR|SINE|MIR -24299 NM_020769 57529 Hs.201071 NM_020769 ENSG00000243978 RTL9 MAR9|MART9|RGAG1|SIRH10 retrotransposon Gag like 9 protein-coding chr20-1773 chr20 53656513 53656723 + 10.0 0.000 Intergenic Intergenic 48264 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr10-4067 chr10 42917613 42917823 + 10.0 0.000 Intergenic MLT2B1|LTR|ERVL 46197 NR_134479 101929445 Hs.376403 NR_134479 ENSG00000234944 LINC02623 - long intergenic non-protein coding RNA 2623 ncRNA chr4-5175 chr4 157827189 157827399 + 10.0 0.000 Intergenic L1PBa|LINE|L1 254804 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr4-3667 chr4 31307942 31308152 + 10.0 0.000 Intergenic Intergenic 136903 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA chr1-9102 chr1 16971580 16971790 + 10.0 0.000 intron (NM_014675, intron 36 of 36) intron (NM_014675, intron 36 of 36) 8935 NM_002403 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr19-2692 chr19 18080673 18080883 + 10.0 0.000 intron (NM_001290024, intron 5 of 17) intron (NM_001290024, intron 5 of 17) 6156 NM_153701 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr15-4018 chr15 59290376 59290586 + 10.0 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 82390 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr11-8479 chr11 118381950 118382160 + 10.0 0.000 intron (NR_046369, intron 3 of 3) intron (NR_046369, intron 3 of 3) -19334 NR_033759 10632 Hs.486360 NM_006476 ENSG00000167283 ATP5MG ATP5JG|ATP5L ATP synthase membrane subunit g protein-coding chr8-2901 chr8 143309839 143310049 + 10.0 0.000 intron (NM_052963, intron 13 of 13) intron (NM_052963, intron 13 of 13) 18527 NM_030895 79943 Hs.512740 NM_030895 ENSG00000185730 ZNF696 - zinc finger protein 696 protein-coding chr5-8482 chr5 132792620 132792830 + 10.0 0.000 Intergenic L2a|LINE|L2 -14856 NM_001098813 23176 Hs.522057 NM_015146 ENSG00000164402 SEPTIN8 SEP2|SEPT8 septin 8 protein-coding chr8-2290 chr8 122365782 122365992 + 10.0 0.000 Intergenic Intergenic 202757 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr2-3299 chr2 96112270 96112480 + 10.0 0.000 TTS (NM_000682) TTS (NM_000682) 4196 NM_000682 151 Hs.247686 NM_000682 ENSG00000274286 ADRA2B ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR adrenoceptor alpha 2B protein-coding chrX-1371 chrX 151697509 151697719 + 10.0 0.000 promoter-TSS (NR_033262) promoter-TSS (NR_033262) -693 NR_033262 79057 Hs.209253 NM_024082 ENSG00000130032 PRRG3 PRGP3|TMG3 proline rich and Gla domain 3 protein-coding chr22-2294 chr22 36920365 36920575 + 10.0 0.000 intron (NM_000395, intron 1 of 13) MLT1A0|LTR|ERVL-MaLR 6842 NM_000395 1439 Hs.592192 NM_000395 ENSG00000100368 CSF2RB CD131|CDw131|IL3RB|IL5RB|SMDP5|betaGMR colony stimulating factor 2 receptor beta common subunit protein-coding chr7-3374 chr7 102480154 102480364 + 10.0 0.000 Intergenic LTR13|LTR|ERVK -1337 NR_163857 chr7-3563 chr7 19494250 19494460 + 10.0 0.000 Intergenic Intergenic 211081 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr3-3209 chr3 194375099 194375309 + 10.0 0.000 Intergenic Intergenic -5461 NM_001135057 131578 Hs.288467 NM_130830 ENSG00000172061 LRRC15 LIB leucine rich repeat containing 15 protein-coding chr22-2745 chr22 39707677 39707887 + 10.0 0.000 Intergenic Intergenic 137029 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr1-16631 chr1 239721459 239721669 + 10.0 0.000 intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) -2445 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr12-2054 chr12 104121192 104121402 + 10.0 0.000 exon (NM_006166, exon 6 of 8) exon (NM_006166, exon 6 of 8) 16913 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr3-9118 chr3 30234075 30234285 + 10.0 0.000 Intergenic Intergenic -284688 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr6-3655 chr6 138799132 138799342 + 10.0 0.000 intron (NM_001195037, intron 1 of 20) intron (NM_001195037, intron 1 of 20) 3126 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr8-2179 chr8 104025767 104025977 + 10.0 0.000 intron (NR_145710, intron 24 of 29) Tigger3a|DNA|TcMar-Tigger -197463 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr20-1995 chr20 49712831 49713041 + 10.0 0.000 intron (NM_004776, intron 1 of 8) intron (NM_004776, intron 1 of 8) 942 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr22-3512 chr22 49746503 49746713 + 10.0 0.000 Intergenic L1MB7|LINE|L1 77723 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr8-4835 chr8 26116757 26116967 + 10.0 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -71449 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chrX-1398 chrX 6564212 6564422 + 10.0 0.000 Intergenic Intergenic -29199 NM_016379 51481 Hs.170076 NM_016379 ENSG00000169059 VCX3A VCX-8r|VCX-A|VCX3|VCX8R|VCXA variable charge X-linked 3A protein-coding chr3-2036 chr3 117735600 117735810 + 10.0 0.000 Intergenic Intergenic -44780 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr7-8327 chr7 42161749 42161959 + 10.0 0.000 intron (NM_000168, intron 2 of 14) intron (NM_000168, intron 2 of 14) 75355 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr7-4751 chr7 71232692 71232902 + 10.0 0.000 intron (NM_022479, intron 1 of 10) MER66A|LTR|ERV1 -74877 NR_037479 100500920 NR_037479 ENSG00000283278 MIR3914-2 - microRNA 3914-2 ncRNA chr2-4749 chr2 10981854 10982064 + 10.0 0.000 Intergenic Intergenic 70025 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr12-7530 chr12 69555448 69555658 + 10.0 0.000 intron (NM_001278351, intron 5 of 10) MER8|DNA|TcMar-Tigger -29170 NR_037476 100500868 NR_037476 ENSG00000283677 MIR3913-2 mir-3913-2 microRNA 3913-2 ncRNA chr8-5775 chr8 142458665 142458875 + 10.0 0.000 intron (NM_001702, intron 1 of 30) L3b|LINE|CR1 9121 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr11-3870 chr11 78715585 78715795 + 10.0 0.000 intron (NM_001098816, intron 25 of 33) MIRc|SINE|MIR -140826 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr7-6119 chr7 121804307 121804517 + 10.0 0.000 Intergenic Intergenic -68749 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr18-2673 chr18 54223505 54223715 + 10.0 0.000 intron (NM_015832, intron 1 of 2) intron (NM_015832, intron 1 of 2) 1059 NM_003927 8932 Hs.25674 NM_003927 ENSG00000134046 MBD2 DMTase|NY-CO-41 methyl-CpG binding domain protein 2 protein-coding chr10-7792 chr10 36441489 36441699 + 10.0 0.000 Intergenic Intergenic 663292 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr1-7930 chr1 168079817 168080027 + 10.0 0.000 3' UTR (NM_001349634, exon 8 of 8) 3' UTR (NM_001349634, exon 8 of 8) 56514 NM_001267612 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr22-1127 chr22 40714680 40714890 + 10.0 0.000 Intergenic Intergenic 35607 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chrX-3457 chrX 25686871 25687081 + 10.0 0.000 Intergenic Intergenic -451367 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr5-4730 chr5 43859127 43859337 + 10.0 0.000 Intergenic Intergenic -256002 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr3-7985 chr3 178456049 178456259 + 10.0 0.000 intron (NR_046786, intron 1 of 2) MER61A|LTR|ERV1 36953 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr10-3788 chr10 127047522 127047732 + 10.0 0.000 intron (NM_001290223, intron 21 of 51) L1ME2|LINE|L1 142218 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr4-4599 chr4 76744660 76744870 + 10.0 0.000 intron (NM_020859, intron 5 of 10) intron (NM_020859, intron 5 of 10) 153379 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr21-1683 chr21 28489740 28489950 + 10.0 0.000 Intergenic Intergenic -49473 NR_026553 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr12-2890 chr12 44465804 44466014 + 10.0 0.000 Intergenic LTR52|LTR|ERVL 409752 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr8-1513 chr8 69502208 69502418 + 10.0 0.000 intron (NR_156414, intron 2 of 20) intron (NR_156414, intron 2 of 20) 9466 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr1-7291 chr1 241337435 241337645 + 10.0 0.000 intron (NM_001350116, intron 1 of 16) intron (NM_001350116, intron 1 of 16) 18286 NM_001350116 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr10-8398 chr10 83512155 83512365 + 10.0 0.000 Intergenic L1ME1|LINE|L1 164829 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr3-10037 chr3 103736928 103737138 + 10.0 0.000 Intergenic L2a|LINE|L2 -212917 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr2-8425 chr2 119120863 119121073 + 10.0 0.000 Intergenic Intergenic 37783 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr22-644 chr22 30015970 30016180 + 10.0 0.000 intron (NM_153051, intron 14 of 18) L2a|LINE|L2 9026 NR_106876 102466742 NR_106876 ENSG00000275818 MIR6818 hsa-mir-6818 microRNA 6818 ncRNA chr1-10193 chr1 112055663 112055873 + 10.0 0.000 Intergenic Intergenic 65232 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr19-5064 chr19 50518239 50518449 + 10.0 0.000 exon (NM_001348568, exon 3 of 3) exon (NM_001348568, exon 3 of 3) -3660 NM_001024656 554235 Hs.436338 NM_001024656 ENSG00000204653 ASPDH - aspartate dehydrogenase domain containing protein-coding chr15-4343 chr15 40595415 40595625 + 10.0 0.000 intron (NM_144508, intron 1 of 25) intron (NM_144508, intron 1 of 25) 1271 NM_144508 57082 Hs.181855 NM_144508 ENSG00000137812 KNL1 AF15Q14|CASC5|CT29|D40|MCPH4|PPP1R55|Spc7|hKNL-1|hSpc105 kinetochore scaffold 1 protein-coding chr2-3751 chr2 3001672 3001882 + 10.0 0.000 intron (NR_110228, intron 3 of 6) intron (NR_110228, intron 3 of 6) 124249 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr9-5311 chr9 86289438 86289648 + 10.0 0.000 intron (NM_001185059, intron 26 of 26) L1M5|LINE|L1 -7005 NM_030940 81689 Hs.449291 NM_030940 ENSG00000135070 ISCA1 HBLD2|ISA1|MMDS5|hIscA iron-sulfur cluster assembly 1 protein-coding chr10-2040 chr10 79929412 79929622 + 10.0 0.000 intron (NR_033857, intron 5 of 5) intron (NR_033857, intron 5 of 5) 9339 NR_002724 8512 Hs.733579 NR_002724 ENSG00000242600 MBL1P COLEC3P|MBL1P1 mannose binding lectin 1, pseudogene pseudo chr3-4834 chr3 142888465 142888675 + 10.0 0.000 intron (NM_013363, intron 1 of 8) CpG 513 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr5-4893 chr5 67362614 67362824 + 10.0 0.000 Intergenic L2c|LINE|L2 -165920 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr12-2034 chr12 57135967 57136177 + 10.0 0.000 intron (NM_002332, intron 1 of 88) intron (NM_002332, intron 1 of 88) 7589 NM_002332 4035 Hs.162757 NM_002332 ENSG00000123384 LRP1 A2MR|APOER|APR|CD91|IGFBP-3R|IGFBP3R|IGFBP3R1|KPA|LRP|LRP1A|TGFBR5 LDL receptor related protein 1 protein-coding chr11-2206 chr11 47540167 47540377 + 10.0 0.000 intron (NM_006560, intron 1 of 13) intron (NM_006560, intron 1 of 13) 12860 NM_006560 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr9-1307 chr9 127584356 127584566 + 10.0 0.000 Intergenic AluJr|SINE|Alu -5430 NM_001035534 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr9-6362 chr9 18566272 18566482 + 10.0 0.000 intron (NM_052866, intron 3 of 12) L2a|LINE|L2 -6929 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr7-4838 chr7 101782700 101782910 + 10.0 0.000 Intergenic Intergenic -33202 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr5-4913 chr5 72703381 72703591 + 10.0 0.000 Intergenic L1ME1|LINE|L1 -42817 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr20-2229 chr20 63518599 63518809 + 10.0 0.000 Intergenic Intergenic -2037 NR_148427 79144 Hs.79625 NM_024299 ENSG00000125534 PPDPF C20orf149|dJ697K14.9|exdpf pancreatic progenitor cell differentiation and proliferation factor protein-coding chr2-3140 chr2 181791268 181791478 + 10.0 0.000 Intergenic Intergenic -100357 NM_001287505 6744 Hs.196983 NM_006751 ENSG00000138434 ITPRID2 CS-1|CS1|KRAP|SPAG13|SSFA2 ITPR interacting domain containing 2 protein-coding chr7-2953 chr7 151836134 151836344 + 10.0 0.000 intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -21368 NM_001040633 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr19-5010 chr19 47461732 47461942 + 10.0 0.000 intron (NM_015063, intron 2 of 9) intron (NM_015063, intron 2 of 9) 10056 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr19-2790 chr19 46932682 46932892 + 10.0 0.000 intron (NM_004491, intron 2 of 6) intron (NM_004491, intron 2 of 6) 71790 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr2-5306 chr2 71846889 71847099 + 10.0 0.000 Intergenic Intergenic 300868 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr21-1811 chr21 39440083 39440293 + 10.0 0.000 intron (NM_152505, intron 1 of 9) L1MC4|LINE|L1 4014 NM_152505 150082 Hs.517284 NM_152505 ENSG00000157578 LCA5L C21orf13 lebercilin LCA5 like protein-coding chr21-808 chr21 10534485 10534695 + 10.0 0.000 intron (NM_001290224, intron 3 of 18) intron (NM_001290224, intron 3 of 18) 13076 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr6-1060 chr6 15791814 15792024 + 10.0 0.000 Intergenic MLT2F|LTR|ERVL -128861 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr7-3194 chr7 121023717 121023927 + 10.0 0.000 intron (NM_001105533, intron 2 of 17) intron (NM_001105533, intron 2 of 17) 34431 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr19-3498 chr19 39479519 39479729 + 10.0 0.000 Intergenic LTR5_Hs|LTR|ERVK -1214 NM_001001563 92609 Hs.590956 NM_001001563 ENSG00000105197 TIMM50 MGCA9|TIM50|TIM50L translocase of inner mitochondrial membrane 50 protein-coding chr17-6640 chr17 66307817 66308027 + 10.0 0.000 intron (NM_002737, intron 2 of 16) L1ME3Cz|LINE|L1 5309 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr19-4138 chr19 27872415 27872625 + 10.0 0.000 intron (NR_146734, intron 1 of 7) (TGATGA)n|Simple_repeat|Simple_repeat -78580 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr18-1242 chr18 50062438 50062648 + 10.0 0.000 intron (NM_001080467, intron 1 of 39) intron (NM_001080467, intron 1 of 39) 64020 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr17-5760 chr17 60468297 60468507 + 10.0 0.000 intron (NM_006380, intron 4 of 12) intron (NM_006380, intron 4 of 12) 45913 NM_181707 124773 Hs.129312 NM_181707 ENSG00000141371 C17orf64 - chromosome 17 open reading frame 64 protein-coding chr21-426 chr21 29382056 29382266 + 10.0 0.000 Intergenic Intergenic 9660 NR_046564 100874322 Hs.326404 NR_046564 BACH1-IT2 - BACH1 intronic transcript 2 ncRNA chr13-1165 chr13 36068147 36068357 + 10.0 0.000 intron (NM_001330071, intron 3 of 16) intron (NM_001330071, intron 3 of 16) 63130 NM_001330071 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr8-2520 chr8 22321848 22322058 + 10.0 0.000 intron (NM_001330480, intron 20 of 21) intron (NM_001330480, intron 20 of 21) -45325 NM_015359 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr15-1210 chr15 55221331 55221541 + 10.0 0.000 intron (NM_183235, intron 6 of 6) intron (NM_183235, intron 6 of 6) -24495 NM_016304 51187 Hs.274772 NM_016304 ENSG00000137876 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding chr14-1310 chr14 53306893 53307103 + 10.0 0.000 Intergenic Intergenic 153644 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr9-8334 chr9 115368003 115368213 + 10.0 0.000 intron (NR_163556, intron 4 of 7) MIRc|SINE|MIR 226290 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr6-8467 chr6 155333514 155333724 + 10.0 0.000 Intergenic (AAGGTTG)n|Simple_repeat|Simple_repeat -19135 NM_016020 51106 Hs.279908 NM_016020 ENSG00000029639 TFB1M CGI-75|CGI75|mtTFB|mtTFB1 transcription factor B1, mitochondrial protein-coding chr16-5386 chr16 88018422 88018632 + 10.0 0.000 exon (NM_001173542, exon 7 of 13) exon (NM_001173542, exon 7 of 13) 48509 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr19-4239 chr19 50310355 50310565 + 10.0 0.000 TTS (NM_001145809) TTS (NM_001145809) 18917 NM_004977 3748 Hs.467146 NM_004977 ENSG00000131398 KCNC3 KSHIIID|KV3.3|SCA13 potassium voltage-gated channel subfamily C member 3 protein-coding chr14-2744 chr14 100557150 100557360 + 10.0 0.000 intron (NM_001159531, intron 1 of 5) intron (NM_001159531, intron 1 of 5) 10815 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr2-9328 chr2 224975954 224976164 + 10.0 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) 6368 NM_001363762 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr7-9237 chr7 120636897 120637107 + 10.0 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 221142 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr10-2095 chr10 123070044 123070254 + 10.0 0.000 Intergenic Intergenic 61143 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chr6-5728 chr6 148441223 148441433 + 10.0 0.000 intron (NM_001346505, intron 4 of 19) intron (NM_001346505, intron 4 of 19) -67171 NM_001346507 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr1-5651 chr1 27102805 27103015 + 10.0 0.000 intron (NR_046474, intron 5 of 10) intron (NR_046474, intron 5 of 10) 52215 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr2-1285 chr2 128362822 128363032 + 10.0 0.000 Intergenic Intergenic -44059 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr9-6762 chr9 22044611 22044821 + 10.0 0.000 intron (NR_003529, intron 3 of 18) intron (NR_003529, intron 3 of 18) -35403 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr11-3975 chr11 2121917 2122127 + 10.0 0.000 Intergenic Intergenic 12187 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr4-8497 chr4 160014488 160014698 + 10.0 0.000 Intergenic Intergenic -236809 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr1-4613 chr1 154992732 154992942 + 10.0 0.000 promoter-TSS (NM_018655) promoter-TSS (NM_018655) -749 NM_018655 55891 Hs.272399 NM_018655 ENSG00000163352 LENEP LEP503 lens epithelial protein protein-coding chr13-3237 chr13 30001035 30001245 + 10.0 0.000 Intergenic MSTC|LTR|ERVL-MaLR 64609 NR_033889 440131 Hs.132371 NM_001010918 LINC00544 - long intergenic non-protein coding RNA 544 ncRNA chr17-2071 chr17 70137923 70138133 + 10.0 0.000 Intergenic Intergenic 31374 NR_036534 400617 Hs.225661 NR_036534 ENSG00000267365 KCNJ2-AS1 - KCNJ2 antisense RNA 1 ncRNA chr11-7174 chr11 129783962 129784172 + 10.0 0.000 Intergenic LTR25-int|LTR|ERV1 -31714 NM_001331211 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr4-1320 chr4 140300280 140300490 + 10.0 0.000 intron (NR_033939, intron 2 of 4) intron (NR_033939, intron 2 of 4) -43058 NM_001153635 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr14-2374 chr14 35931903 35932113 + 10.0 0.000 Intergenic Intergenic 105670 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr4-4254 chr4 19239531 19239741 + 10.0 0.000 Intergenic Intergenic -1012269 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr3-7796 chr3 87793230 87793440 + 10.0 0.000 intron (NM_001322208, intron 1 of 2) CpG 629 NM_001322209 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr5-9069 chr5 171149381 171149591 + 10.0 0.000 intron (NM_022897, intron 14 of 27) intron (NM_022897, intron 14 of 27) -159762 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr10-3067 chr10 919620 919830 + 10.0 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 11980 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr8-2665 chr8 81858954 81859164 + 10.0 0.000 Intergenic Intergenic -16773 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr5-3126 chr5 56347339 56347549 + 10.0 0.000 Intergenic Intergenic -114114 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr9-3297 chr9 76576420 76576630 + 10.0 0.000 Intergenic Intergenic 75892 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr1-11510 chr1 154672020 154672230 + 10.0 0.000 Intergenic HERV9NC-int|LTR|ERV1 -44128 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr7-3296 chr7 41104990 41105200 + 10.0 0.000 intron (NR_110832, intron 1 of 5) (ACTAC)n|Simple_repeat|Simple_repeat 3491 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr14-3843 chr14 75361363 75361573 + 10.0 0.000 Intergenic Intergenic -66256 NM_001135047 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chr4-3069 chr4 145483030 145483240 + 10.0 0.000 5' UTR (NM_001354817, exon 1 of 7) 5' UTR (NM_001354817, exon 1 of 7) 330 NM_001354817 4086 Hs.604588 NM_005900 ENSG00000170365 SMAD1 BSP-1|BSP1|JV4-1|JV41|MADH1|MADR1 SMAD family member 1 protein-coding chr20-1432 chr20 42337432 42337642 + 10.0 0.000 intron (NM_133170, intron 11 of 31) MIRb|SINE|MIR -347946 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr5-3534 chr5 15764150 15764360 + 10.0 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -149253 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr5-2742 chr5 135796245 135796455 + 10.0 0.000 intron (NM_001349335, intron 3 of 10) SATR1|Satellite|Satellite 6725 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr11-2156 chr11 69958220 69958430 + 10.0 0.000 Intergenic Intergenic 105599 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr18-2097 chr18 50054744 50054954 + 10.0 0.000 intron (NM_001080467, intron 2 of 39) MIR|SINE|MIR 71714 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr3-4814 chr3 130871169 130871379 + 10.0 0.000 intron (NM_001199181, intron 1 of 26) intron (NM_001199181, intron 1 of 26) 20679 NM_001199180 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr9-1865 chr9 74952340 74952550 + 10.0 0.000 promoter-TSS (NR_121183) promoter-TSS (NR_121183) 467 NM_017998 55071 Hs.532296 NM_017998 ENSG00000135045 C9orf40 - chromosome 9 open reading frame 40 protein-coding chr20-2540 chr20 35773462 35773672 + 10.0 0.000 intron (NM_016436, intron 1 of 17) intron (NM_016436, intron 1 of 17) 1552 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding chr13-1346 chr13 45162355 45162565 + 10.0 0.000 intron (NM_004128, intron 4 of 7) intron (NM_004128, intron 4 of 7) 38585 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr3-2423 chr3 197756254 197756464 + 10.0 0.000 intron (NM_001011537, intron 2 of 9) intron (NM_001011537, intron 2 of 9) 6112 NR_027840 84248 Hs.277533 NM_032288 ENSG00000122068 FYTTD1 UIF forty-two-three domain containing 1 protein-coding chr5-3085 chr5 38326186 38326396 + 10.0 0.000 intron (NM_152403, intron 1 of 21) intron (NM_152403, intron 1 of 21) -35305 NR_046219 100852408 Hs.570954 NR_046219 ENSG00000248730 EGFLAM-AS4 - EGFLAM antisense RNA 4 ncRNA chr13-3589 chr13 27867576 27867786 + 10.0 0.000 intron (NR_047484, intron 1 of 4) L1MEi|LINE|L1 49610 NR_047484 100861550 Hs.416201 NR_047484 PLUT HI-LNC71|PDX1-AS1|PLUTO PDX1 associated lncRNA, upregulator of transcription ncRNA chr16-2685 chr16 77834616 77834826 + 10.0 0.000 intron (NM_020927, intron 3 of 8) intron (NM_020927, intron 3 of 8) 46157 NM_020927 57687 Hs.461405 NM_020927 ENSG00000171724 VAT1L - vesicle amine transport 1 like protein-coding chr6-2938 chr6 27688153 27688363 + 10.0 0.000 Intergenic tRNA-Ile-ATT|tRNA|tRNA -5777 NR_038293 100507173 Hs.635987 NR_038292 ENSG00000281706 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA chr1-6468 chr1 19981702 19981912 + 10.0 0.000 Intergenic L2a|LINE|L2 -1373 NM_001161727 5320 Hs.466804 NM_000300 ENSG00000188257 PLA2G2A MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2 phospholipase A2 group IIA protein-coding chr10-4447 chr10 71402213 71402423 + 10.0 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 5384 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr2-5109 chr2 19047262 19047472 + 10.0 0.000 Intergenic Intergenic -20396 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr8-7327 chr8 133763846 133764056 + 10.0 0.000 Intergenic Intergenic 13401 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr15-1669 chr15 40337485 40337695 + 10.0 0.000 intron (NM_207380, intron 6 of 10) intron (NM_207380, intron 6 of 10) 3377 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 CCDC9B C15orf52 coiled-coil domain containing 9B protein-coding chr2-14438 chr2 222609477 222609687 + 10.0 0.000 intron (NR_130154, intron 16 of 17) intron (NR_130154, intron 16 of 17) 46510 NM_005687 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chr2-2561 chr2 219521173 219521383 + 10.0 0.000 intron (NM_018674, intron 1 of 9) intron (NM_018674, intron 1 of 9) 7108 NM_182847 55515 Hs.87469 NM_018674 ENSG00000072182 ASIC4 ACCN4|BNAC4 acid sensing ion channel subunit family member 4 protein-coding chr1-12641 chr1 42319295 42319505 + 10.0 0.000 intron (NM_001198851, intron 2 of 14) L1MB8|LINE|L1 15555 NM_001198851 22887 Hs.26023 NM_014947 ENSG00000198815 FOXJ3 - forkhead box J3 protein-coding chr9-4929 chr9 13171393 13171603 + 10.0 0.000 intron (NM_003829, intron 21 of 45) intron (NM_003829, intron 21 of 45) 108066 NM_001261406 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr18-1424 chr18 10417416 10417626 + 10.0 0.000 Intergenic Intergenic -3151 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr17-8327 chr17 72830045 72830255 + 10.0 0.000 intron (NM_001352692, intron 6 of 9) intron (NM_001352692, intron 6 of 9) -189678 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr8-2349 chr8 23750938 23751148 + 10.0 0.000 Intergenic Intergenic -44445 NM_001136271 137814 Hs.532654 NM_001136271 ENSG00000180053 NKX2-6 CSX2|CTHM|NKX2F|NKX4-2 NK2 homeobox 6 protein-coding chr4-7605 chr4 81888149 81888359 + 10.0 0.000 Intergenic MIRb|SINE|MIR -416347 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr14-1809 chr14 36553804 36554014 + 10.0 0.000 Intergenic Intergenic 28705 NM_014360 26257 Hs.234763 NM_014360 ENSG00000136327 NKX2-8 NKX2.8|NKX2H|Nkx2-9 NK2 homeobox 8 protein-coding chr2-6243 chr2 37387581 37387791 + 10.0 0.000 Intergenic LTR16E2|LTR|ERVL 43056 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr2-5810 chr2 231557376 231557586 + 10.0 0.000 Intergenic Intergenic -27036 NM_006056 10316 Hs.471619 NM_006056 ENSG00000171596 NMUR1 (FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R neuromedin U receptor 1 protein-coding chr8-2223 chr8 22191080 22191290 + 10.0 0.000 intron (NR_033404, intron 8 of 15) MIRc|SINE|MIR 25813 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr10-4446 chr10 71364526 71364736 + 10.0 0.000 Intergenic Intergenic -32289 NM_052836 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr19-3208 chr19 50437326 50437536 + 10.0 0.000 intron (NM_004533, intron 5 of 27) intron (NM_004533, intron 5 of 27) 4539 NM_004533 4606 Hs.85937 NM_004533 ENSG00000086967 MYBPC2 MYBPC|MYBPCF myosin binding protein C, fast type protein-coding chr22-1813 chr22 35154995 35155205 + 10.0 0.000 intron (NR_126356, intron 4 of 5) intron (NR_126356, intron 4 of 5) 75956 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA chr8-5267 chr8 136210679 136210889 + 10.0 0.000 Intergenic Intergenic -320014 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr4-3142 chr4 178032340 178032550 + 10.0 0.000 Intergenic Intergenic -124509 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr4-3732 chr4 77238204 77238414 + 10.0 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 81102 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr6-4694 chr6 55413284 55413494 + 10.0 0.000 Intergenic THE1B|LTR|ERVL-MaLR 85920 NM_207410 389400 Hs.526967 NM_207410 ENSG00000187871 GFRAL C6orf144|GRAL|UNQ9356|bA360D14.1 GDNF family receptor alpha like protein-coding chr19-2813 chr19 49155473 49155683 + 10.0 0.000 promoter-TSS (NM_002152) promoter-TSS (NM_002152) -182 NM_002152 3270 Hs.436885 NM_002152 ENSG00000130528 HRC - histidine rich calcium binding protein protein-coding chr8-3819 chr8 28824123 28824333 + 10.0 0.000 intron (NR_026826, intron 4 of 14) intron (NR_026826, intron 4 of 14) 65687 NM_001172562 55756 Hs.162397 NM_018250 ENSG00000104299 INTS9 CPSF2L|INT9|RC74 integrator complex subunit 9 protein-coding chr7-8050 chr7 22286421 22286631 + 10.0 0.000 intron (NM_012294, intron 6 of 25) intron (NM_012294, intron 6 of 25) 70628 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr8-5014 chr8 5115349 5115559 + 10.0 0.000 Intergenic Intergenic -120540 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr13-929 chr13 75760682 75760892 + 10.0 0.000 5' UTR (NM_015842, exon 1 of 27) 5' UTR (NM_015842, exon 1 of 27) 126 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr3-7009 chr3 170864821 170865031 + 10.0 0.000 TTS (NM_001320451) TTS (NM_001320451) 5269 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr6-2489 chr6 85483003 85483213 + 10.0 0.000 intron (NM_002526, intron 3 of 8) intron (NM_002526, intron 3 of 8) 33025 NM_002526 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr4-7033 chr4 26410760 26410970 + 10.0 0.000 intron (NM_203284, intron 4 of 11) intron (NM_203284, intron 4 of 11) 79619 NM_000730 886 Hs.129 NM_000730 ENSG00000163394 CCKAR CCK-A|CCK1-R|CCK1R|CCKRA cholecystokinin A receptor protein-coding chr12-5778 chr12 6244863 6245073 + 10.0 0.000 Intergenic Intergenic 44568 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr4-1868 chr4 188588993 188589203 + 10.0 0.000 intron (NR_033869, intron 4 of 4) intron (NR_033869, intron 4 of 4) 133520 NR_033869 401164 Hs.435756 NR_033869 ENSG00000249378 LINC01060 - long intergenic non-protein coding RNA 1060 ncRNA chr4-1718 chr4 183201549 183201759 + 10.0 0.000 intron (NM_024949, intron 2 of 22) intron (NM_024949, intron 2 of 22) 38980 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr12-3512 chr12 126033477 126033687 + 10.0 0.000 Intergenic HERVK22-int|LTR|ERVK -50208 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr16-4503 chr16 57932181 57932391 + 10.0 0.000 intron (NM_001297, intron 16 of 32) MIRb|SINE|MIR 38842 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr16-3346 chr16 19899301 19899511 + 10.0 0.000 Intergenic Intergenic -13772 NM_001304771 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chrX-2206 chrX 41358527 41358737 + 10.0 0.000 intron (NR_126093, intron 18 of 18) intron (NR_126093, intron 18 of 18) 24466 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr6-6851 chr6 8642177 8642387 + 10.0 0.000 intron (NR_038980, intron 3 of 4) intron (NR_038980, intron 3 of 4) -9927 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr1-6138 chr1 167429569 167429779 + 10.0 0.000 TTS (NM_198053) TTS (NM_198053) 88855 NM_000734 919 Hs.156445 NM_000734 ENSG00000198821 CD247 CD3-ZETA|CD3H|CD3Q|CD3Z|IMD25|T3Z|TCRZ CD247 molecule protein-coding chr21-1699 chr21 30152184 30152394 + 10.0 0.000 Intergenic Intergenic 14516 NM_012131 26285 Hs.258589 NM_012131 ENSG00000156282 CLDN17 - claudin 17 protein-coding chr4-4896 chr4 121508145 121508355 + 10.0 0.000 Intergenic Intergenic -127232 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr14-1785 chr14 103226458 103226668 + 10.0 0.000 Intergenic Intergenic -37535 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr15-585 chr15 66293525 66293735 + 10.0 0.000 promoter-TSS (NM_001323945) promoter-TSS (NM_001323945) 62 NM_001323940 115752 Hs.446251 NM_133375 ENSG00000166938 DIS3L DIS3L1 DIS3 like exosome 3'-5' exoribonuclease protein-coding chr21-1700 chr21 30272450 30272660 + 10.0 0.000 Intergenic Intergenic 10395 NM_001085455 643803 Hs.580883 NM_001085455 ENSG00000188694 KRTAP24-1 KAP24.1 keratin associated protein 24-1 protein-coding chr5-8064 chr5 94181754 94181964 + 10.0 0.000 intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) -70160 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr11-9003 chr11 24141985 24142195 + 10.0 0.000 Intergenic Intergenic -354963 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr3-10006 chr3 100666062 100666272 + 10.0 0.000 intron (NM_001308362, intron 8 of 9) LTR5_Hs|LTR|ERVK 30629 NM_001308362 84873 Hs.334511 NM_032787 ENSG00000144820 ADGRG7 GPR128 adhesion G protein-coupled receptor G7 protein-coding chr8-1734 chr8 15943271 15943481 + 10.0 0.000 Intergenic Intergenic 242896 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr15-2793 chr15 35616773 35616983 + 10.0 0.000 intron (NR_038251, intron 1 of 2) L1MD2|LINE|L1 70683 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr13-1641 chr13 59774641 59774851 + 10.0 0.000 exon (NM_030932, exon 20 of 21) exon (NM_030932, exon 20 of 21) -237972 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr11-3553 chr11 28343295 28343505 + 10.0 0.000 Intergenic Intergenic 134148 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr19-3932 chr19 48375667 48375877 + 10.0 0.000 intron (NM_012451, intron 4 of 4) intron (NM_012451, intron 4 of 4) 11405 NM_012451 23546 Hs.408333 NM_012451 ENSG00000105467 SYNGR4 - synaptogyrin 4 protein-coding chr5-4266 chr5 139908593 139908803 + 10.0 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 112890 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr7-5734 chr7 73454573 73454783 + 10.0 0.000 intron (NM_001370402, intron 13 of 18) intron (NM_001370402, intron 13 of 18) 20900 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr16-3835 chr16 58974936 58975146 + 10.0 0.000 Intergenic Intergenic -240725 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr9-1887 chr9 114225296 114225506 + 10.0 0.000 intron (NM_032888, intron 14 of 60) intron (NM_032888, intron 14 of 60) 15967 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr7-9054 chr7 103526334 103526544 + 10.0 0.000 intron (NM_005045, intron 46 of 64) intron (NM_005045, intron 46 of 64) -80232 NM_198999 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr5-2281 chr5 39733822 39734032 + 10.0 0.000 Intergenic MER45A|DNA|hAT-Tip100 213496 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chrX-2625 chrX 109461579 109461789 + 10.0 0.000 intron (NM_001522, intron 3 of 19) MER63A|DNA|hAT-Blackjack 20402 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr1-9986 chr1 83077621 83077831 + 10.0 0.000 intron (NR_147074, intron 6 of 10) intron (NR_147074, intron 6 of 10) -91518 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chr4-2419 chr4 113026807 113027017 + 10.0 0.000 intron (NM_001354275, intron 2 of 43) L2-3_Crp|LINE|L2 -22502 NM_001354236 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr1-6258 chr1 235644865 235645075 + 10.0 0.000 intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 4814 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr3-7064 chr3 176553323 176553533 + 10.0 0.000 Intergenic Intergenic 38325 NR_107017 102465858 NR_107017 ENSG00000283333 MIR7977 hsa-mir-7977 microRNA 7977 ncRNA chr4-2653 chr4 185116137 185116347 + 10.0 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -27024 NM_001151 291 Hs.246506 NM_001151 ENSG00000151729 SLC25A4 AAC1|ANT|ANT 1|ANT1|MTDPS12|MTDPS12A|PEO2|PEO3|PEOA2|T1 solute carrier family 25 member 4 protein-coding chr12-3067 chr12 7860579 7860789 + 10.0 0.000 intron (NM_001286237, intron 1 of 9) intron (NM_001286237, intron 1 of 9) 12231 NM_001286233 144195 Hs.655169 NM_153449 ENSG00000173262 SLC2A14 GLUT14|SLC2A3P3 solute carrier family 2 member 14 protein-coding chr4-3721 chr4 73453165 73453375 + 10.0 0.000 intron (NM_001354717, intron 12 of 14) intron (NM_001354717, intron 12 of 14) 17049 NM_001354717 174 Hs.518808 NM_001134 ENSG00000081051 AFP AFPD|FETA|HPAFP alpha fetoprotein protein-coding chr21-1549 chr21 9007021 9007231 + 10.0 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 19509 NR_162105 113218501 NR_162105 MIR10396A - microRNA 10396a ncRNA chrX-4152 chrX 30558675 30558885 + 10.0 0.000 TTS (NM_025159) TTS (NM_025159) 18986 NM_025159 80231 Hs.665009 NM_025159 ENSG00000120280 CXorf21 - chromosome X open reading frame 21 protein-coding chr2-6752 chr2 38904938 38905148 + 10.0 0.000 Intergenic Intergenic -14320 NM_001367623 100271715 Hs.99841 NM_001145451 ENSG00000214694 ARHGEF33 - Rho guanine nucleotide exchange factor 33 protein-coding chr13-1017 chr13 36453778 36453988 + 10.0 0.000 Intergenic Intergenic 21388 NM_003914 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr4-8657 chr4 177389600 177389810 + 10.0 0.000 Intergenic Intergenic 52732 NM_000027 175 Hs.207776 NM_000027 ENSG00000038002 AGA AGU|ASRG|GA aspartylglucosaminidase protein-coding chr3-4400 chr3 196341151 196341361 + 10.0 0.000 Intergenic L1ME3|LINE|L1 -2836 NR_037950 100534611 Hs.733180 NR_037950 TM4SF19-TCTEX1D2 - TM4SF19-TCTEX1D2 readthrough (NMD candidate) ncRNA chr20-2091 chr20 22431042 22431252 + 10.0 0.000 Intergenic Intergenic -10504 NR_027090 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr11-3928 chr11 127152033 127152243 + 10.0 0.000 Intergenic Intergenic 85136 NR_120578 101929473 Hs.737523 NR_120578 ENSG00000255087 LOC101929473 - uncharacterized LOC101929473 ncRNA chr8-1703 chr8 116232006 116232216 + 10.0 0.000 intron (NR_046215, intron 4 of 13) intron (NR_046215, intron 4 of 13) 92948 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr20-3214 chr20 56441671 56441881 + 10.0 0.000 intron (NM_001164116, intron 3 of 6) MIR3|SINE|MIR -26809 NM_001283036 51507 Hs.517134 NM_016407 ENSG00000022277 RTF2 C20orf43|CDAO5|HSPC164|RTFDC1|SHUJUN-3 replication termination factor 2 protein-coding chr11-3697 chr11 5719675 5719885 + 10.0 0.000 Intergenic Intergenic -16668 NM_001005180 387748 Hs.689609 NM_001005180 ENSG00000181023 OR56B1 OR11-65|OR56B1P olfactory receptor family 56 subfamily B member 1 protein-coding chr8-3282 chr8 20617015 20617225 + 10.0 0.000 Intergenic Intergenic -2194 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr4-7393 chr4 62249614 62249824 + 10.0 0.000 Intergenic L2a|LINE|L2 -87954 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr2-3539 chr2 9229303 9229513 + 10.0 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 22596 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr1-3978 chr1 154937641 154937851 + 10.0 0.000 intron (NM_001323012, intron 1 of 4) intron (NM_001323012, intron 1 of 4) -1027 NM_001323011 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr9-7683 chr9 70804218 70804428 + 10.0 0.000 intron (NM_001366143, intron 6 of 25) AluSx1|SINE|Alu 5761 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chrX-1541 chrX 40997178 40997388 + 10.0 0.000 Intergenic Intergenic -88162 NM_001039590 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr3-8515 chr3 134895682 134895892 + 10.0 0.000 intron (NM_004441, intron 1 of 15) intron (NM_004441, intron 1 of 15) 100527 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr4-7141 chr4 37726687 37726897 + 10.0 0.000 Intergenic Intergenic -40416 NM_001085399 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr5-5591 chr5 150369910 150370120 + 10.0 0.000 intron (NM_000356, intron 6 of 25) intron (NM_000356, intron 6 of 25) 12318 NM_001135245 6949 Hs.519672 NM_000356 ENSG00000070814 TCOF1 MFD1|TCS|TCS1|treacle treacle ribosome biogenesis factor 1 protein-coding chr8-849 chr8 19013681 19013891 + 10.0 0.000 promoter-TSS (NM_015310) promoter-TSS (NM_015310) -83 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr7-3318 chr7 66150530 66150740 + 10.0 0.000 intron (NR_024548, intron 6 of 6) MIR3|SINE|MIR 35788 NM_014478 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr20-1594 chr20 4703038 4703248 + 10.0 0.000 Intergenic MER88|LTR|ERVL 16687 NM_001080123 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr3-6646 chr3 127967386 127967596 + 10.0 0.000 intron (NM_001370224, intron 5 of 6) HAL1|LINE|L1 52259 NM_207335 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr2-8734 chr2 159723160 159723370 + 10.0 0.000 intron (NM_001282805, intron 3 of 11) intron (NM_001282805, intron 3 of 11) -10699 NM_001282807 64844 Hs.529272 NM_022826 ENSG00000136536 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane associated ring-CH-type finger 7 protein-coding chr19-1849 chr19 12885484 12885694 + 10.0 0.000 exon (NM_006563, exon 2 of 3) exon (NM_006563, exon 2 of 3) 1614 NM_006563 10661 Hs.37860 NM_006563 ENSG00000105610 KLF1 EKLF|EKLF/KLF1 Kruppel like factor 1 protein-coding chr11-6053 chr11 30786375 30786585 + 10.0 0.000 Intergenic Intergenic -200127 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr15-2052 chr15 56750029 56750239 + 10.0 0.000 Intergenic Intergenic -16048 NM_001288589 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding chr3-4261 chr3 148147010 148147220 + 10.0 0.000 Intergenic MER5A|DNA|hAT-Charlie 68956 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr10-5599 chr10 93478849 93479059 + 10.0 0.000 intron (NM_013451, intron 1 of 53) intron (NM_013451, intron 1 of 53) 3380 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr1-10581 chr1 175555014 175555224 + 10.0 0.000 intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 188476 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr1-14555 chr1 52612579 52612789 + 10.0 0.000 Intergenic Intergenic 10313 NM_015696 2882 Hs.43728 NM_015696 ENSG00000116157 GPX7 CL683|GPX6|GPx-7|GSHPx-7|NPGPx glutathione peroxidase 7 protein-coding chr17-3823 chr17 42312354 42312564 + 10.0 0.000 TTS (NM_139276) TTS (NM_139276) 24403 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr2-4080 chr2 130372114 130372324 + 10.0 0.000 intron (NM_014369, intron 12 of 14) CpG 16163 NM_014369 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr11-3413 chr11 11295195 11295405 + 10.0 0.000 intron (NM_001363464, intron 8 of 9) LTR33|LTR|ERVL 57950 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr12-6343 chr12 56908684 56908894 + 10.0 0.000 Intergenic MER52D|LTR|ERV1 25619 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chr2-4578 chr2 86114277 86114487 + 10.0 0.000 intron (NM_017952, intron 4 of 23) AluYf1|SINE|Alu 8147 NM_017952 55037 Hs.323489 NM_017952 ENSG00000132300 PTCD3 MRP-S39 pentatricopeptide repeat domain 3 protein-coding chr2-10015 chr2 25453206 25453416 + 10.0 0.000 intron (NM_001351393, intron 9 of 17) intron (NM_001351393, intron 9 of 17) -110721 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr14-3493 chr14 102750543 102750753 + 10.0 0.000 Intergenic Intergenic -26801 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr6-4331 chr6 16929961 16930171 + 10.0 0.000 Intergenic Intergenic -168576 NM_001128164 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr19-3115 chr19 12994767 12994977 + 10.0 0.000 promoter-TSS (NM_002501) promoter-TSS (NM_002501) -603 NM_001365982 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr20-2795 chr20 56369322 56369532 + 10.0 0.000 TTS (NM_003600) TTS (NM_003600) 10453 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding chr20-2051 chr20 7617980 7618190 + 10.0 0.000 Intergenic L1MC3|LINE|L1 246477 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chr1-6054 chr1 87291234 87291444 + 10.0 0.000 Intergenic Intergenic -37541 NM_006769 8543 Hs.436792 NM_006769 ENSG00000143013 LMO4 - LIM domain only 4 protein-coding chr4-7675 chr4 87266518 87266728 + 10.0 0.000 Intergenic AluSx|SINE|Alu 33960 NR_049891 100847027 NR_049891 ENSG00000263981 MIR5705 - microRNA 5705 ncRNA chr10-1467 chr10 98879674 98879884 + 10.0 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) 44789 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr11-4545 chr11 121250824 121251034 + 10.0 0.000 Intergenic Intergenic -41842 NM_006918 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr14-1829 chr14 52225623 52225833 + 10.0 0.000 Intergenic Intergenic -41970 NM_000953 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr6-5024 chr6 110814192 110814402 + 10.0 0.000 promoter-TSS (NM_001287215) promoter-TSS (NM_001287215) -324 NM_001287215 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr11-1232 chr11 64331976 64332186 + 10.0 0.000 Intergenic Intergenic -8123 NM_032251 283234 Hs.98564 NM_032251 ENSG00000168071 CCDC88B BRLZ|CCDC88|HKRP3|gipie coiled-coil domain containing 88B protein-coding chr8-3270 chr8 17089665 17089875 + 10.0 0.000 intron (NR_146233, intron 7 of 15) MIR|SINE|MIR 62532 NM_181723 286097 Hs.403594 NM_181723 ENSG00000155970 MICU3 EFHA2 mitochondrial calcium uptake family member 3 protein-coding chr20-1593 chr20 4656422 4656632 + 10.0 0.000 Intergenic Intergenic -29929 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr12-2610 chr12 122895836 122896046 + 10.0 0.000 intron (NM_024667, intron 1 of 3) CpG 183 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr2-7156 chr2 200492731 200492941 + 10.0 0.000 intron (NM_001321550, intron 6 of 6) intron (NM_001321550, intron 6 of 6) 17232 NM_001321547 130535 Hs.605775 NM_152387 ENSG00000155729 KCTD18 6530404F10Rik potassium channel tetramerization domain containing 18 protein-coding chr2-3174 chr2 203815288 203815498 + 10.0 0.000 Intergenic Intergenic -52378 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr20-1574 chr20 2985465 2985675 + 10.0 0.000 intron (NM_002836, intron 10 of 27) intron (NM_002836, intron 10 of 27) -58052 NM_001310220 2797 Hs.129715 NM_001501 ENSG00000125787 GNRH2 GnRH-II|LH-RHII gonadotropin releasing hormone 2 protein-coding chr1-8142 chr1 12061726 12061936 + 10.0 0.000 Intergenic Intergenic -1472 NM_001243 943 Hs.1314 NM_001243 ENSG00000120949 TNFRSF8 CD30|D1S166E|Ki-1 TNF receptor superfamily member 8 protein-coding chr3-4803 chr3 126776166 126776376 + 10.0 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 72031 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr3-3999 chr3 58005748 58005958 + 10.0 0.000 Intergenic Intergenic -2569 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr17-2947 chr17 59930787 59930997 + 10.0 0.000 non-coding (NR_161460, exon 7 of 16) non-coding (NR_161460, exon 7 of 16) 33848 NM_016125 51136 Hs.531701 NM_016125 ENSG00000189050 RNFT1 PTD016 ring finger protein, transmembrane 1 protein-coding chr2-4657 chr2 191666381 191666591 + 10.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -11586 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr9-1265 chr9 131075475 131075685 + 10.0 0.000 intron (NM_006059, intron 20 of 27) MER94|DNA|hAT-Blackjack -20896 NR_033701 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr1-16267 chr1 212364548 212364758 + 10.0 0.000 3' UTR (NM_018252, exon 8 of 8) 3' UTR (NM_018252, exon 8 of 8) 11835 NR_004389 692157 Hs.707958 NR_004389 ENSG00000201544 SNORA16B U98b small nucleolar RNA, H/ACA box 16B snoRNA chr2-9448 chr2 234051962 234052172 + 10.0 0.000 intron (NM_006944, intron 2 of 7) intron (NM_006944, intron 2 of 7) 1365 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr5-1483 chr5 97555075 97555285 + 10.0 0.000 intron (NR_105028, intron 2 of 3) LTR16A1|LTR|ERVL 50484 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chrX-5254 chrX 138101179 138101389 + 10.0 0.000 Intergenic L1M2|LINE|L1 535157 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr1-4053 chr1 204417820 204418030 + 10.0 0.000 Intergenic L2c|LINE|L2 -6108 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr1-8134 chr1 10859547 10859757 + 10.0 0.000 Intergenic AluJb|SINE|Alu -63006 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr3-3145 chr3 160862359 160862569 + 10.0 0.000 intron (NM_001317911, intron 1 of 3) intron (NM_001317911, intron 1 of 3) -8134 NR_134243 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr5-6152 chr5 39547961 39548171 + 10.0 0.000 Intergenic Intergenic 27635 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr3-9608 chr3 56890634 56890844 + 10.0 0.000 intron (NM_001128615, intron 3 of 12) intron (NM_001128615, intron 3 of 12) 25697 NM_001289698 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chrX-2487 chrX 88020857 88021067 + 10.0 0.000 Intergenic MER41C|LTR|ERV1 503160 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr19-3539 chr19 44927075 44927285 + 10.0 0.000 intron (NR_028414, intron 2 of 3) intron (NR_028414, intron 2 of 3) 377 NR_028414 342 Hs.110675 NR_028412 ENSG00000214855 APOC1P1 - apolipoprotein C1 pseudogene 1 pseudo chr1-8417 chr1 88044691 88044901 + 10.0 0.000 Intergenic Intergenic -639348 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr4-3941 chr4 168584626 168584836 + 10.0 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) -46847 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr1-10224 chr1 115284191 115284401 + 10.0 0.000 intron (NR_157569, intron 1 of 1) intron (NR_157569, intron 1 of 1) 1262 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr6-3538 chr6 40537677 40537887 + 10.0 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 49582 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr6-8506 chr6 158635877 158636087 + 10.0 0.000 TTS (NM_020823) TTS (NM_020823) 8761 NM_001291603 6993 Hs.445999 NM_006519 ENSG00000146425 DYNLT1 CW-1|TCTEL1|tctex-1 dynein light chain Tctex-type 1 protein-coding chr10-1938 chr10 10805551 10805761 + 10.0 0.000 intron (NM_001326327, intron 1 of 14) MER67A|LTR|ERV1 6931 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr3-4093 chr3 104952650 104952860 + 10.0 0.000 Intergenic Intergenic -413958 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr6-4114 chr6 154702569 154702779 + 10.0 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -30704 NM_001286189 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr10-8371 chr10 80672239 80672449 + 10.0 0.000 Intergenic MIRc|SINE|MIR 22547 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr11-8547 chr11 131900148 131900358 + 10.0 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -9671 NM_001352009 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr18-911 chr18 58903607 58903817 + 10.0 0.000 intron (NM_001353535, intron 2 of 6) intron (NM_001353535, intron 2 of 6) 38835 NM_001353527 55205 Hs.529023 NM_018181 ENSG00000074657 ZNF532 - zinc finger protein 532 protein-coding chr14-2372 chr14 35156322 35156532 + 10.0 0.000 intron (NM_014672, intron 4 of 7) intron (NM_014672, intron 4 of 7) 33875 NM_001256680 9692 Hs.458487 NM_014672 ENSG00000100890 PRORP KIAA0391|MRPP3 protein only RNase P catalytic subunit protein-coding chr4-6340 chr4 95059848 95060058 + 10.0 0.000 intron (NM_001256793, intron 1 of 10) intron (NM_001256793, intron 1 of 10) 8276 NM_001256793 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr3-3926 chr3 49278664 49278874 + 10.0 0.000 intron (NM_199443, intron 20 of 20) intron (NM_199443, intron 20 of 20) -1537 NM_198562 375341 Hs.403828 NM_198562 ENSG00000188315 C3orf62 - chromosome 3 open reading frame 62 protein-coding chr13-3173 chr13 109201645 109201855 + 10.0 0.000 intron (NM_015011, intron 34 of 34) L1PB1|LINE|L1 -34447 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr9-1708 chr9 100352279 100352489 + 10.0 0.000 intron (NM_017746, intron 1 of 14) CpG 187 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr16-4236 chr16 19369705 19369915 + 10.0 0.000 Intergenic L1MC3|LINE|L1 -40729 NM_001308161 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr16-4809 chr16 86200558 86200768 + 10.0 0.000 TTS (NR_103859) TTS (NR_103859) 4482 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr12-2751 chr12 44058487 44058697 + 10.0 0.000 intron (NM_001286212, intron 3 of 6) intron (NM_001286212, intron 3 of 6) 222511 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr11-8404 chr11 96752447 96752657 + 10.0 0.000 Intergenic L1PA11|LINE|L1 244127 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr4-2600 chr4 127441947 127442157 + 10.0 0.000 Intergenic Intergenic -190905 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr8-4010 chr8 57513672 57513882 + 10.0 0.000 Intergenic Intergenic 169990 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr18-477 chr18 62425636 62425846 + 10.0 0.000 Intergenic Intergenic -97284 NM_017742 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr9-1823 chr9 129093531 129093741 + 10.0 0.000 Intergenic Intergenic 12525 NR_072983 57171 Hs.21701 NM_020438 ENSG00000167130 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding chr10-5605 chr10 93652911 93653121 + 10.0 0.000 intron (NM_006204, intron 15 of 21) intron (NM_006204, intron 15 of 21) 40479 NM_006204 5146 Hs.658121 NM_006204 ENSG00000095464 PDE6C ACHM5|COD4|PDEA2 phosphodiesterase 6C protein-coding chr1-3551 chr1 230773181 230773391 + 10.0 0.000 intron (NM_016452, intron 7 of 18) (GAGAT)n|Simple_repeat|Simple_repeat 25898 NM_006615 10753 Hs.498021 NM_006615 ENSG00000135773 CAPN9 GC36|nCL-4 calpain 9 protein-coding chr5-3543 chr5 32628151 32628361 + 10.0 0.000 Intergenic Intergenic 42699 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr15-3457 chr15 92583915 92584125 + 10.0 0.000 Intergenic MER112|DNA|hAT-Charlie -11757 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 - long intergenic non-protein coding RNA 930 ncRNA chr2-5415 chr2 112493566 112493776 + 10.0 0.000 intron (NM_153712, intron 2 of 6) intron (NM_153712, intron 2 of 6) 11515 NM_153712 150465 Hs.358997 NM_153712 ENSG00000114999 TTL - tubulin tyrosine ligase protein-coding chr2-5855 chr2 238270727 238270937 + 10.0 0.000 intron (NM_022817, intron 6 of 22) intron (NM_022817, intron 6 of 22) 17778 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr5-3287 chr5 116517488 116517698 + 10.0 0.000 intron (NM_001300780, intron 1 of 19) intron (NM_001300780, intron 1 of 19) -56825 NR_147170 105379132 NR_147170 SEMA6A-AS2 - SEMA6A antisense RNA 2 ncRNA chr16-5586 chr16 50307796 50308006 + 10.0 0.000 intron (NM_001114, intron 15 of 25) AluSx1|SINE|Alu 15285 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chr2-4801 chr2 43841481 43841691 + 10.0 0.000 intron (NM_001357321, intron 1 of 12) intron (NM_001357321, intron 1 of 12) 2615 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr7-3545 chr7 12450785 12450995 + 10.0 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -45539 NR_136261 102725191 Hs.602382 NR_136261 ENSG00000226690 LOC102725191 - uncharacterized LOC102725191 ncRNA chr1-6737 chr1 66532336 66532546 + 10.0 0.000 Intergenic Intergenic -1152 NM_001308203 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr2-5111 chr2 19363166 19363376 + 10.0 0.000 Intergenic Intergenic -4648 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr16-5755 chr16 86548392 86548602 + 10.0 0.000 exon (NM_001159377, exon 4 of 8) exon (NM_001159377, exon 4 of 8) 6738 NM_022764 64779 Hs.343627 NM_022764 ENSG00000103248 MTHFSD - methenyltetrahydrofolate synthetase domain containing protein-coding chr6-1657 chr6 149840891 149841101 + 10.0 0.000 intron (NM_032832, intron 3 of 6) intron (NM_032832, intron 3 of 6) -22502 NR_045126 100652739 Hs.642734 NR_045126 ENSG00000223701 RAET1E-AS1 RAET1G-AS1 RAET1E antisense RNA 1 ncRNA chr18-2109 chr18 51345283 51345493 + 10.0 0.000 Intergenic Intergenic -46654 NR_040075 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr6-4311 chr6 15708346 15708556 + 10.0 0.000 Intergenic Intergenic -45393 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr7-4917 chr7 131085190 131085400 + 10.0 0.000 intron (NR_109850, intron 2 of 5) L1MC4|LINE|L1 21735 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr6-3541 chr6 42819801 42820011 + 10.0 0.000 intron (NM_001318819, intron 3 of 13) intron (NM_001318819, intron 3 of 13) -1150 NM_015349 23506 Hs.658033 NM_015349 ENSG00000112624 BICRAL GLTSCR1L|KIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding chr7-3283 chr7 25912082 25912292 + 10.0 0.000 Intergenic Intergenic 37799 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr11-2166 chr11 118074655 118074865 + 10.0 0.000 intron (NM_001354434, intron 1 of 5) AluSz|SINE|Alu -2252 NR_110734 56649 Hs.161985 NM_019894 ENSG00000137648 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane serine protease 4 protein-coding chr2-7436 chr2 11187157 11187367 + 10.0 0.000 intron (NM_001321643, intron 32 of 32) Tigger7|DNA|TcMar-Tigger 31795 NR_104231 130814 Hs.274415 NM_152391 ENSG00000162976 SLC66A3 C2orf22|PQLC3 solute carrier family 66 member 3 protein-coding chr8-3588 chr8 137274991 137275201 + 10.0 0.000 Intergenic Intergenic 138492 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr7-3508 chr7 5365342 5365552 + 10.0 0.000 intron (NM_001080495, intron 11 of 29) intron (NM_001080495, intron 11 of 29) 58099 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr12-3256 chr12 64863396 64863606 + 10.0 0.000 intron (NM_001364838, intron 8 of 11) intron (NM_001364838, intron 8 of 11) -20273 NR_033988 400046 Hs.591032 NR_033988 ENSG00000255693 LINC02389 - long intergenic non-protein coding RNA 2389 ncRNA chr2-1672 chr2 96536638 96536848 + 10.0 0.000 promoter-TSS (NM_001319085) promoter-TSS (NM_001319085) -9 NM_001319093 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr22-1817 chr22 36226460 36226670 + 10.0 0.000 3' UTR (NM_145637, exon 6 of 6) 3' UTR (NM_145637, exon 6 of 6) 12962 NM_030882 23780 Hs.474740 NM_030882 ENSG00000128335 APOL2 APOL-II|APOL3 apolipoprotein L2 protein-coding chr17-2601 chr17 79421738 79421948 + 10.0 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 94305 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr3-10912 chr3 172148508 172148718 + 10.0 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 108082 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr11-1870 chr11 363370 363580 + 10.0 0.000 Intergenic Intergenic -6024 NM_178537 338707 Hs.148074 NM_178537 ENSG00000182272 B4GALNT4 - beta-1,4-N-acetyl-galactosaminyltransferase 4 protein-coding chr15-2493 chr15 101219496 101219706 + 10.0 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 32447 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr18-1571 chr18 33194148 33194358 + 10.0 0.000 intron (NM_001308126, intron 20 of 23) MIRb|SINE|MIR 246318 NM_001371121 chr9-3466 chr9 4615217 4615427 + 10.0 0.000 intron (NR_148446, intron 6 of 8) L2c|LINE|L2 46901 NR_148447 55064 Hs.179615 NM_017985 ENSG00000106686 SPATA6L C9orf68|bA6J24.2 spermatogenesis associated 6 like protein-coding chr3-1508 chr3 138329867 138330077 + 10.0 0.000 promoter-TSS (NM_001349023) promoter-TSS (NM_001349023) -121 NM_001349018 347736 Hs.660992 NM_178130 ENSG00000181322 NME9 NM23-H9|TXL-2|TXL2|TXNDC6 NME/NM23 family member 9 protein-coding chrX-2714 chrX 121606033 121606243 + 10.0 0.000 Intergenic Intergenic 235166 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr3-3485 chr3 194616616 194616826 + 10.0 0.000 intron (NM_001011655, intron 6 of 9) intron (NM_001011655, intron 6 of 9) 16698 NM_001011655 93109 Hs.478729 NM_138399 ENSG00000145014 TMEM44 - transmembrane protein 44 protein-coding chr22-2591 chr22 30369835 30370045 + 10.0 0.000 non-coding (NR_046312, exon 2 of 2) non-coding (NR_046312, exon 2 of 2) 7965 NR_046312 85371 Hs.505597 NR_046312 KIAA1656 - KIAA1656 protein ncRNA chr10-2205 chr10 43067489 43067699 + 10.0 0.000 Intergenic Intergenic -9433 NM_020630 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr13-919 chr13 60584466 60584676 + 10.0 0.000 Intergenic LTR8|LTR|ERV1 -88384 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr9-2379 chr9 124934650 124934860 + 10.0 0.000 intron (NM_002077, intron 3 of 22) L2c|LINE|L2 6328 NM_002077 2800 Hs.59504 NM_002077 ENSG00000136935 GOLGA1 golgin-97 golgin A1 protein-coding chr1-4666 chr1 206557384 206557594 + 10.0 0.000 5' UTR (NM_182665, exon 1 of 5) 5' UTR (NM_182665, exon 1 of 5) 325 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr1-1331 chr1 203327458 203327668 + 10.0 0.000 Intergenic CpG 22044 NM_006763 7832 Hs.519162 NM_006763 ENSG00000159388 BTG2 APRO1|PC3|TIS21 BTG anti-proliferation factor 2 protein-coding chr10-4278 chr10 6737210 6737420 + 10.0 0.000 promoter-TSS (NR_138480) promoter-TSS (NR_138480) -67 NR_138480 108570035 Hs.568834 NR_138480 LINP1 - lncRNA in non-homologous end joining pathway 1 ncRNA chr5-3440 chr5 157221734 157221944 + 10.0 0.000 intron (NM_005546, intron 5 of 16) intron (NM_005546, intron 5 of 16) 40943 NM_005546 3702 Hs.558348 NM_005546 ENSG00000113263 ITK EMT|LPFS1|LYK|PSCTK2 IL2 inducible T cell kinase protein-coding chrX-2453 chrX 81582609 81582819 + 10.0 0.000 Intergenic L1PA16|LINE|L1 380612 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr14-1822 chr14 50997709 50997919 + 10.0 0.000 3' UTR (NM_052978, exon 7 of 7) 3' UTR (NM_052978, exon 7 of 7) -53331 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr16-4612 chr16 69368107 69368317 + 10.0 0.000 intron (NM_005652, intron 6 of 9) intron (NM_005652, intron 6 of 9) -16426 NM_144676 146456 Hs.729118 NM_144676 ENSG00000157315 TMED6 PRO34237|SPLL9146|p24g5 transmembrane p24 trafficking protein 6 protein-coding chr11-4474 chr11 107457159 107457369 + 10.0 0.000 intron (NM_152434, intron 1 of 17) intron (NM_152434, intron 1 of 17) 582 NM_152434 143884 Hs.212140 NM_152434 ENSG00000152404 CWF19L2 - CWF19 like cell cycle control factor 2 protein-coding chr3-9943 chr3 89664690 89664900 + 10.0 0.000 Intergenic AluSx|SINE|Alu 557174 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr6-2322 chr6 111804493 111804703 + 10.0 0.000 intron (NM_153047, intron 2 of 13) intron (NM_153047, intron 2 of 13) -44681 NM_001370529 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr17-2171 chr17 50201700 50201910 + 10.0 0.000 promoter-TSS (NM_000088) promoter-TSS (NM_000088) -166 NM_000088 1277 Hs.172928 NM_000088 ENSG00000108821 COL1A1 EDSARTH1|EDSC|OI1|OI2|OI3|OI4 collagen type I alpha 1 chain protein-coding chr5-3893 chr5 151204530 151204740 + 10.0 0.000 intron (NM_015621, intron 2 of 8) L3|LINE|CR1 -7499 NR_160730 105378230 NR_160730 LOC105378230 - uncharacterized LOC105378230 ncRNA chr19-2117 chr19 1673454 1673664 + 10.0 0.000 Intergenic Intergenic -20944 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr5-5305 chr5 126520085 126520295 + 10.0 0.000 Intergenic Intergenic 55040 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr12-4500 chr12 22083346 22083556 + 10.0 0.000 Intergenic Intergenic 37233 NM_018686 55907 Hs.311346 NM_018686 ENSG00000111726 CMAS CSS cytidine monophosphate N-acetylneuraminic acid synthetase protein-coding chr5-2856 chr5 74762618 74762828 + 10.0 0.000 intron (NR_104006, intron 2 of 19) MER44C|DNA|TcMar-Tigger 4394 NR_104006 84340 Hs.277154 NM_032380 ENSG00000164347 GFM2 EF-G2mt|EFG2|MRRF2|MST027|MSTP027|RRF|RRF2|RRF2mt|hEFG2|mEF-G 2 G elongation factor mitochondrial 2 protein-coding chr11-7910 chr11 134069865 134070075 + 10.0 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 898 NM_032801 83700 Hs.150718 NM_032801 ENSG00000166086 JAM3 JAM-2|JAM-3|JAM-C|JAMC junctional adhesion molecule 3 protein-coding chr6-1412 chr6 136644177 136644387 + 10.0 0.000 intron (NM_005923, intron 11 of 29) intron (NM_005923, intron 11 of 29) 15168 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr5-4604 chr5 31575455 31575665 + 10.0 0.000 Intergenic Tigger9a|DNA|TcMar-Tigger 43259 NM_018356 55322 Hs.519246 NM_018356 ENSG00000082213 C5orf22 - chromosome 5 open reading frame 22 protein-coding chr7-3207 chr7 129407824 129408034 + 10.0 0.000 intron (NM_001130720, intron 10 of 16) L2c|LINE|L2 -26503 NM_001134336 57464 Hs.489988 NM_020704 ENSG00000128578 STRIP2 FAM40B|FAR11B striatin interacting protein 2 protein-coding chr7-4015 chr7 148603607 148603817 + 10.0 0.000 intron (NM_145304, intron 1 of 2) intron (NM_145304, intron 1 of 2) 12946 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr14-1388 chr14 50377066 50377276 + 10.0 0.000 intron (NM_001282236, intron 2 of 8) LTR16E2|LTR|ERVL 19710 NM_004196 8814 Hs.280881 NM_004196 ENSG00000100490 CDKL1 KKIALRE|P42 cyclin dependent kinase like 1 protein-coding chr19-6681 chr19 35281301 35281511 + 10.0 0.000 Intergenic Intergenic -1122 NM_021175 57817 Hs.8821 NM_021175 ENSG00000105697 HAMP HEPC|HFE2B|LEAP1|PLTR hepcidin antimicrobial peptide protein-coding chr8-4818 chr8 17498596 17498806 + 10.0 0.000 intron (NM_001008539, intron 1 of 11) intron (NM_001008539, intron 1 of 11) 1613 NM_001008539 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr20-1711 chr20 38084437 38084647 + 10.0 0.000 intron (NM_021215, intron 6 of 6) intron (NM_021215, intron 6 of 6) 50796 NM_021215 58490 Hs.278839 NM_021215 ENSG00000101413 RPRD1B C20orf77|CREPT|K-H|Kub5-Hera|NET60|dJ1057B20.2 regulation of nuclear pre-mRNA domain containing 1B protein-coding chr15-2262 chr15 47599779 47599989 + 10.0 0.000 intron (NM_001198999, intron 3 of 19) intron (NM_001198999, intron 3 of 19) -117621 NM_001358352 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr22-669 chr22 47142428 47142638 + 10.0 0.000 intron (NM_001284305, intron 12 of 12) (CCCA)n|Simple_repeat|Simple_repeat -203038 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr15-1735 chr15 41799237 41799447 + 10.0 0.000 intron (NR_049762, intron 2 of 28) intron (NR_049762, intron 2 of 28) 24858 NR_049762 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr13-3189 chr13 111280983 111281193 + 10.0 0.000 intron (NM_001330597, intron 15 of 18) intron (NM_001330597, intron 15 of 18) -35097 NM_001303133 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr13-2436 chr13 47548399 47548609 + 10.0 0.000 Intergenic LTR16|LTR|ERVL 384118 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr21-1093 chr21 33780866 33781076 + 10.0 0.000 intron (NM_001001132, intron 14 of 29) intron (NM_001001132, intron 14 of 29) 134833 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr10-8103 chr10 69045593 69045803 + 10.0 0.000 Intergenic Intergenic -41905 NM_001321053 5552 Hs.1908 NM_002727 ENSG00000122862 SRGN PPG|PRG|PRG1 serglycin protein-coding chr4-1696 chr4 165461464 165461674 + 10.0 0.000 intron (NM_001873, intron 1 of 8) L2a|LINE|L2 75327 NR_030304 693163 NR_030304 ENSG00000207559 MIR578 MIRN578|hsa-mir-578 microRNA 578 ncRNA chr2-3920 chr2 54604362 54604572 + 10.0 0.000 intron (NM_178313, intron 2 of 30) intron (NM_178313, intron 2 of 30) 46073 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr10-6193 chr10 27695944 27696154 + 10.0 0.000 intron (NM_001242702, intron 5 of 6) intron (NM_001242702, intron 5 of 6) -48566 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr1-12825 chr1 88422927 88423137 + 10.0 0.000 Intergenic L1M2|LINE|L1 -261112 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1-4971 chr1 54672374 54672584 + 10.0 0.000 intron (NM_001039464, intron 7 of 23) intron (NM_001039464, intron 7 of 23) 30693 NM_001039464 374977 Hs.412482 NM_198547 ENSG00000184313 MROH7 C1orf175|HEATR8 maestro heat like repeat family member 7 protein-coding chr13-2986 chr13 90721479 90721689 + 10.0 0.000 Intergenic THE1C|LTR|ERVL-MaLR 205013 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr2-5786 chr2 226660762 226660972 + 10.0 0.000 Intergenic L2b|LINE|L2 -2074 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr6-1729 chr6 38213325 38213535 + 10.0 0.000 intron (NM_052893, intron 10 of 11) intron (NM_052893, intron 10 of 11) -268166 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr17-3413 chr17 7102002 7102212 + 10.0 0.000 exon (NM_001181, exon 8 of 9) exon (NM_001181, exon 8 of 9) 12203 NM_080914 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chr12-2657 chr12 22262551 22262761 + 10.0 0.000 intron (NM_003034, intron 2 of 4) intron (NM_003034, intron 2 of 4) 72058 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr4-1479 chr4 13322574 13322784 + 10.0 0.000 Intergenic L1MA5|LINE|L1 161661 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr3-2602 chr3 157160665 157160875 + 10.0 0.000 promoter-TSS (NM_020307) promoter-TSS (NM_020307) -10 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr12-2803 chr12 106921193 106921403 + 10.0 0.000 Intergenic LTR78B|LTR|ERV1 -34424 NM_001319666 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr3-3853 chr3 36461741 36461951 + 10.0 0.000 intron (NM_001292049, intron 2 of 8) L2a|LINE|L2 81359 NM_003149 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr13-812 chr13 21298589 21298799 + 10.0 0.000 promoter-TSS (NM_001365454) promoter-TSS (NM_001365454) 569 NR_046461 650794 Hs.147563 NR_038939 MIPEPP3 - mitochondrial intermediate peptidase pseudogene 3 pseudo chr12-4130 chr12 69108020 69108230 + 10.0 0.000 Intergenic Intergenic -131444 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr2-11007 chr2 102768915 102769125 + 10.0 0.000 intron (NM_001321346, intron 3 of 3) intron (NM_001321346, intron 3 of 3) 6989 NM_144632 130827 Hs.436203 NM_144632 ENSG00000170417 TMEM182 - transmembrane protein 182 protein-coding chr11-5669 chr11 128883460 128883670 + 10.0 0.000 Intergenic HAL1|LINE|L1 -7791 NM_001354169 3762 Hs.444595 NM_000890 ENSG00000120457 KCNJ5 CIR|GIRK4|KATP1|KIR3.4|LQT13 potassium voltage-gated channel subfamily J member 5 protein-coding chr15-1528 chr15 62087945 62088155 + 10.0 0.000 Intergenic Intergenic 21073 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding chr12-5912 chr12 64691909 64692119 + 10.0 0.000 intron (NR_040718, intron 3 of 3) intron (NR_040718, intron 3 of 3) 67392 NM_002076 2799 Hs.334534 NM_002076 ENSG00000135677 GNS G6S glucosamine (N-acetyl)-6-sulfatase protein-coding chr11-1553 chr11 59172049 59172259 + 10.0 0.000 promoter-TSS (NM_015177) promoter-TSS (NM_015177) 22 NM_015177 23220 Hs.523696 NM_015177 ENSG00000110042 DTX4 RNF155 deltex E3 ubiquitin ligase 4 protein-coding chr4-3201 chr4 20456490 20456700 + 10.0 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 64406 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr12-3110 chr12 26821409 26821619 + 10.0 0.000 intron (NM_002223, intron 1 of 56) intron (NM_002223, intron 1 of 56) 11680 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr1-9769 chr1 55696242 55696452 + 10.0 0.000 Intergenic Intergenic 248616 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr8-3226 chr8 137149539 137149749 + 10.0 0.000 Intergenic MER77B|LTR|ERVL 263944 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr1-14222 chr1 35764309 35764519 + 10.0 0.000 exon (NM_022111, exon 3 of 25) exon (NM_022111, exon 3 of 25) 5564 NM_001330490 63967 Hs.175613 NM_022111 ENSG00000092853 CLSPN - claspin protein-coding chr5-4987 chr5 80557858 80558068 + 10.0 0.000 3' UTR (NM_001004441, exon 5 of 5) 3' UTR (NM_001004441, exon 5 of 5) 12317 NM_001004441 340120 Hs.519404 NM_001004441 ENSG00000189127 ANKRD34B DP58 ankyrin repeat domain 34B protein-coding chr11-5314 chr11 47375865 47376075 + 10.0 0.000 intron (NM_001080547, intron 1 of 4) intron (NM_001080547, intron 1 of 4) 2577 NM_003120 6688 Hs.502511 NM_003120 ENSG00000066336 SPI1 OF|PU.1|SFPI1|SPI-1|SPI-A Spi-1 proto-oncogene protein-coding chr7-3218 chr7 140923512 140923722 + 10.0 0.000 intron (NR_148928, intron 1 of 17) intron (NR_148928, intron 1 of 17) 1312 NM_001354609 673 Hs.324250 NM_004333 ENSG00000157764 BRAF B-RAF1|B-raf|BRAF1|NS7|RAFB1 B-Raf proto-oncogene, serine/threonine kinase protein-coding chr4-2224 chr4 143360979 143361189 + 10.0 0.000 intron (NM_207123, intron 1 of 10) intron (NM_207123, intron 1 of 10) 17624 NR_036091 100423017 NR_036091 ENSG00000265623 MIR3139 - microRNA 3139 ncRNA chr8-2945 chr8 30932007 30932217 + 10.0 0.000 Intergenic L1M3de|LINE|L1 -19104 NM_001350162 56154 Hs.458316 NM_001350162 ENSG00000133863 TEX15 CT42|SPGF25 testis expressed 15, meiosis and synapsis associated protein-coding chr7-4926 chr7 133009811 133010021 + 10.0 0.000 intron (NM_001317177, intron 3 of 8) intron (NM_001317177, intron 3 of 8) 24999 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr3-4317 chr3 171816355 171816565 + 10.0 0.000 Intergenic Intergenic -5977 NM_001130081 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr22-1353 chr22 27475205 27475415 + 10.0 0.000 Intergenic Intergenic 164659 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr18-882 chr18 46261871 46262081 + 10.0 0.000 intron (NM_001008239, intron 3 of 3) intron (NM_001008239, intron 3 of 3) -72042 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr13-2024 chr13 43041157 43041367 + 10.0 0.000 intron (NM_013238, intron 1 of 5) LTR5_Hs|LTR|ERVK 17676 NM_013238 29103 Hs.438830 NM_013238 ENSG00000120675 DNAJC15 DNAJD1|HSD18|MCJ DnaJ heat shock protein family (Hsp40) member C15 protein-coding chr9-2683 chr9 72428080 72428290 + 10.0 0.000 Intergenic Intergenic -62977 NM_001102420 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr13-2327 chr13 33193830 33194040 + 10.0 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -7844 NM_178007 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr6-5249 chr6 136669066 136669276 + 10.0 0.000 intron (NM_005923, intron 8 of 29) intron (NM_005923, intron 8 of 29) 40057 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr1-7846 chr1 77975280 77975490 + 10.0 0.000 intron (NM_003902, intron 1 of 19) intron (NM_003902, intron 1 of 19) 3687 NR_130152 8880 Hs.567380 NM_003902 ENSG00000162613 FUBP1 FBP|FUBP|hDH V far upstream element binding protein 1 protein-coding chr7-2699 chr7 24936195 24936405 + 10.0 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) -43679 NR_104111 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr11-8865 chr11 13755211 13755421 + 10.0 0.000 Intergenic L1PB1|LINE|L1 -29070 NR_149108 105376562 Hs.577257 NR_149108 ENSG00000255411 LINC02548 - long intergenic non-protein coding RNA 2548 ncRNA chr5-3266 chr5 107671233 107671443 + 10.0 0.000 promoter-TSS (NM_001962) promoter-TSS (NM_001962) -401 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr6-3411 chr6 99218034 99218244 + 10.0 0.000 Intergenic Intergenic 93530 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chr19-2817 chr19 49928629 49928839 + 10.0 0.000 promoter-TSS (NM_012068) promoter-TSS (NM_012068) 32 NM_012068 22809 Hs.9754 NM_012068 ENSG00000169136 ATF5 ATFX|HMFN0395 activating transcription factor 5 protein-coding chr1-4204 chr1 93338627 93338837 + 10.0 0.000 non-coding (NR_034089, exon 5 of 9) non-coding (NR_034089, exon 5 of 9) 7079 NR_034089 100131564 Hs.732666 NR_034089 CCDC18-AS1 - CCDC18 antisense RNA 1 ncRNA chr13-828 chr13 46530625 46530835 + 10.0 0.000 Intergenic Intergenic -22440 NM_001164211 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr2-5020 chr2 231170074 231170284 + 10.0 0.000 intron (NM_001191037, intron 22 of 23) MER5A1|DNA|hAT-Charlie -28452 NM_001271466 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr10-4195 chr10 102593287 102593497 + 10.0 0.000 intron (NM_001178133, intron 4 of 10) intron (NM_001178133, intron 4 of 10) -51103 NM_030912 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr18-3485 chr18 72040970 72041180 + 10.0 0.000 Intergenic Intergenic -258849 NR_126324 102724913 NR_126324 ENSG00000265352 LINC01899 - long intergenic non-protein coding RNA 1899 ncRNA chr2-7293 chr2 237806366 237806576 + 10.0 0.000 intron (NM_001080504, intron 1 of 15) intron (NM_001080504, intron 1 of 15) 7726 NM_001080504 375316 Hs.607265 NM_198852 ENSG00000177483 RBM44 - RNA binding motif protein 44 protein-coding chr12-4201 chr12 98753190 98753400 + 10.0 0.000 intron (NM_001352221, intron 8 of 9) intron (NM_001352221, intron 8 of 9) 107995 NM_181869 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr6-6978 chr6 18689024 18689234 + 10.0 0.000 intron (NR_149116, intron 6 of 7) intron (NR_149116, intron 6 of 7) 117345 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr2-8375 chr2 111617515 111617725 + 10.0 0.000 Intergenic Intergenic -122459 NR_136166 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr11-2527 chr11 74705849 74706059 + 10.0 0.000 intron (NM_001304390, intron 5 of 10) intron (NM_001304390, intron 5 of 10) 5413 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr2-4681 chr2 217851428 217851638 + 10.0 0.000 intron (NM_001308023, intron 15 of 29) intron (NM_001308023, intron 15 of 29) -17800 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chrX-4273 chrX 41340042 41340252 + 10.0 0.000 intron (NM_001363819, intron 3 of 16) AluSz|SINE|Alu 5981 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr6-7100 chr6 34415398 34415608 + 10.0 0.000 intron (NM_001202470, intron 5 of 8) intron (NM_001202470, intron 5 of 8) 10566 NM_001014 6204 Hs.406620 NM_001014 ENSG00000124614 RPS10 DBA9|S10 ribosomal protein S10 protein-coding chrX-539 chrX 115968354 115968564 + 10.0 0.000 intron (NR_130730, intron 1 of 2) intron (NR_130730, intron 1 of 2) 652 NR_132337 642776 Hs.634316 NR_130730 ENSG00000235244 DANT2 - DXZ4 associated non-coding transcript 2, distal ncRNA chr20-2109 chr20 31901634 31901844 + 10.0 0.000 intron (NM_001367620, intron 4 of 11) L2b|LINE|L2 21922 NR_160277 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr8-5353 chr8 17987882 17988092 + 10.0 0.000 intron (NM_001352648, intron 27 of 39) intron (NM_001352648, intron 27 of 39) 64999 NR_148032 5108 Hs.491148 NM_006197 ENSG00000078674 PCM1 PTC4|RET/PCM-1 pericentriolar material 1 protein-coding chr8-1624 chr8 60416170 60416380 + 10.0 0.000 Intergenic Intergenic -2457 NR_103854 100505532 Hs.720321 NR_103854 LINC01301 - long intergenic non-protein coding RNA 1301 ncRNA chr17-2676 chr17 39672309 39672519 + 10.0 0.000 3' UTR (NM_033419, exon 8 of 8) 3' UTR (NM_033419, exon 8 of 8) 3961 NM_002686 5409 Hs.1892 NM_002686 ENSG00000141744 PNMT PENT|PNMTase phenylethanolamine N-methyltransferase protein-coding chr4-2603 chr4 132195229 132195439 + 10.0 0.000 Intergenic Intergenic -395755 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr1-9018 chr1 11450981 11451191 + 10.0 0.000 Intergenic MIR1_Amn|SINE|MIR -28069 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr22-1008 chr22 19166548 19166758 + 10.0 0.000 Intergenic Intergenic -5053 NR_103767 100652736 Hs.572896 NR_103767 LINC01311 - long intergenic non-protein coding RNA 1311 ncRNA chr2-8646 chr2 146663735 146663945 + 10.0 0.000 Intergenic Intergenic 76783 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr18-144 chr18 76401680 76401890 + 10.0 0.000 intron (NM_014643, intron 3 of 6) CpG -89867 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr19-3023 chr19 49546878 49547088 + 10.0 0.000 Intergenic L1MEb|LINE|L1 18980 NM_020650 57333 Hs.567550 NM_020650 ENSG00000142552 RCN3 RLP49 reticulocalbin 3 protein-coding chr3-3457 chr3 157429792 157430002 + 10.0 0.000 intron (NM_024621, intron 4 of 13) intron (NM_024621, intron 4 of 13) -6953 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr16-2667 chr16 67212802 67213012 + 10.0 0.000 intron (NM_001365159, intron 2 of 6) AluSz|SINE|Alu -10512 NR_029887 442901 NR_029887 ENSG00000207948 MIR328 MIRN328|hsa-mir-328|mir-328 microRNA 328 ncRNA chr12-2481 chr12 68279057 68279267 + 10.0 0.000 Intergenic L1M5|LINE|L1 -25558 NM_020525 50616 Hs.287369 NM_020525 ENSG00000127318 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding chr11-6277 chr11 59560802 59561012 + 10.0 0.000 Intergenic CpG 34251 NR_036120 100422880 NR_036120 ENSG00000264559 MIR3162 mir-3162 microRNA 3162 ncRNA chr4-3758 chr4 86664962 86665172 + 10.0 0.000 intron (NM_080685, intron 2 of 47) intron (NM_080685, intron 2 of 47) 70752 NM_006264 5783 Hs.436142 NM_006264 ENSG00000163629 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase non-receptor type 13 protein-coding chr11-3324 chr11 111718575 111718785 + 10.0 0.000 intron (NM_015191, intron 9 of 14) intron (NM_015191, intron 9 of 14) 47709 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr15-2419 chr15 69092142 69092352 + 10.0 0.000 non-coding (NR_026949, exon 3 of 4) non-coding (NR_026949, exon 3 of 4) 11397 NR_026949 283673 Hs.177927 NM_173610 ENSG00000212766 EWSAT1 LINC00277|NCRNA00277|TMEM84 Ewing sarcoma associated transcript 1 ncRNA chr8-7135 chr8 121132337 121132547 + 10.0 0.000 Intergenic Intergenic -320396 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr6-2240 chr6 46993904 46994114 + 10.0 0.000 Intergenic L2|LINE|L2 -39070 NM_015234 221395 Hs.362806 NM_015234 ENSG00000069122 ADGRF5 GPR116|KPG_001 adhesion G protein-coupled receptor F5 protein-coding chr18-1186 chr18 24447246 24447456 + 10.0 0.000 intron (NM_018439, intron 8 of 10) intron (NM_018439, intron 8 of 10) -13286 NM_001160166 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr7-1922 chr7 5479170 5479380 + 10.0 0.000 3' UTR (NM_001367781, exon 5 of 5) 3' UTR (NM_001367781, exon 5 of 5) 16642 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr17-5631 chr17 49526942 49527152 + 10.0 0.000 intron (NR_103773, intron 1 of 2) MIR3|SINE|MIR 16230 NR_106751 102465141 NR_106751 ENSG00000277478 MIR6165 hsa-mir-6165 microRNA 6165 ncRNA chr1-4543 chr1 58065656 58065866 + 10.0 0.000 intron (NM_001353980, intron 1 of 5) LTR16A|LTR|ERVL 184742 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr12-5342 chr12 116455605 116455815 + 10.0 0.000 Intergenic Intergenic -27392 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr1-11851 chr1 36199092 36199302 + 10.0 0.000 Intergenic AluSq2|SINE|Alu -25246 NM_001321473 9967 Hs.744057 NM_005119 ENSG00000054118 THRAP3 BCLAF2|TRAP150 thyroid hormone receptor associated protein 3 protein-coding chr17-5670 chr17 50401700 50401910 + 10.0 0.000 Intergenic HERV17-int|LTR|ERV1 -4282 NM_018509 55379 Hs.370927 NM_018509 ENSG00000108829 LRRC59 PRO1855|p34 leucine rich repeat containing 59 protein-coding chr5-4461 chr5 6712089 6712299 + 10.0 0.000 Intergenic Intergenic -1238 NM_006999 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr22-1664 chr22 42342697 42342907 + 10.0 0.000 Intergenic Intergenic 26406 NR_120596 102723775 Hs.335413 NR_120595 ENSG00000229891 LINC01315 C22orf32-1|lnc-C22orf32-1 long intergenic non-protein coding RNA 1315 ncRNA chr19-3265 chr19 2399141 2399351 + 10.0 0.000 intron (NM_182973, intron 3 of 16) intron (NM_182973, intron 3 of 16) 9475 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr12-4651 chr12 45718485 45718695 + 10.0 0.000 Intergenic Intergenic 9331 NR_028408 400027 Hs.597122 NR_028408 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA chr15-2150 chr15 75797777 75797987 + 10.0 0.000 Intergenic MER77B|LTR|ERVL -35567 NR_036198 100423035 NR_036198 ENSG00000284385 MIR4313 - microRNA 4313 ncRNA chr2-6453 chr2 158586357 158586567 + 10.0 0.000 intron (NM_001005476, intron 3 of 20) intron (NM_001005476, intron 3 of 20) 129510 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr2-5266 chr2 61292482 61292692 + 10.0 0.000 intron (NM_014709, intron 33 of 79) MER30B|DNA|hAT-Charlie 115169 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr5-5123 chr5 102884540 102884750 + 10.0 0.000 intron (NR_033440, intron 2 of 23) intron (NR_033440, intron 2 of 23) 18822 NM_000919 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr6-5657 chr6 87828679 87828889 + 10.0 0.000 intron (NR_110869, intron 2 of 4) intron (NR_110869, intron 2 of 4) 43924 NR_110869 101928911 Hs.571178 NR_110869 LOC101928911 - uncharacterized LOC101928911 ncRNA chr16-5996 chr16 7013387 7013597 + 10.0 0.000 intron (NM_001142334, intron 1 of 13) MER20|DNA|hAT-Charlie 239683 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr2-4377 chr2 29529060 29529270 + 10.0 0.000 intron (NM_004304, intron 4 of 28) intron (NM_004304, intron 4 of 28) -53788 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr14-5321 chr14 101999898 102000108 + 10.0 0.000 exon (NM_001376, exon 17 of 78) exon (NM_001376, exon 17 of 78) 35430 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr11-3149 chr11 47906365 47906575 + 10.0 0.000 Intergenic AluJb|SINE|Alu -57926 NM_015231 23279 Hs.643526 NM_015231 ENSG00000030066 NUP160 NPHS19 nucleoporin 160 protein-coding chr17-3932 chr17 58666494 58666704 + 10.0 0.000 intron (NM_031272, intron 1 of 31) U1|snRNA|snRNA 25456 NM_001201457 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113|SPGF23 testis expressed 14, intercellular bridge forming factor protein-coding chr6-6016 chr6 110547582 110547792 + 10.0 0.000 Intergenic Intergenic -71074 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr8-5618 chr8 98953483 98953693 + 10.0 0.000 Intergenic Intergenic 9146 NM_001142462 116039 Hs.253247 NM_053001 ENSG00000164920 OSR2 - odd-skipped related transciption factor 2 protein-coding chr17-5621 chr17 49181709 49181919 + 9.90 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 27567 NM_031498 2793 Hs.181781 NM_031498 ENSG00000167083 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 G protein subunit gamma transducin 2 protein-coding chr2-14174 chr2 205509581 205509791 + 9.90 0.000 intron (NM_205863, intron 20 of 21) intron (NM_205863, intron 20 of 21) -172814 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr2-4968 chr2 192286242 192286452 + 9.90 0.000 Intergenic MER20|DNA|hAT-Charlie -91414 NM_001305134 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr1-4893 chr1 36285459 36285669 + 9.90 0.000 intron (NM_001321471, intron 4 of 12) intron (NM_001321471, intron 4 of 12) -20804 NM_001162530 79729 Hs.524496 NM_024676 ENSG00000214193 SH3D21 C1orf113 SH3 domain containing 21 protein-coding chr17-6748 chr17 82612552 82612762 + 9.90 0.000 Intergenic L1M4a2|LINE|L1 35787 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr17-3630 chr17 2563167 2563377 + 9.90 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -30382 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr11-4965 chr11 68695302 68695512 + 9.90 0.000 Intergenic Intergenic 10863 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr18-3297 chr18 54134185 54134395 + 9.90 0.000 Intergenic Intergenic 88122 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr12-1981 chr12 124259860 124260070 + 9.90 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -29199 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr4-7875 chr4 104512917 104513127 + 9.90 0.000 intron (NR_125926, intron 1 of 9) ERV3-16A3_I-int|LTR|ERVL -18128 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr21-1068 chr21 31395217 31395427 + 9.90 0.000 intron (NM_001353690, intron 1 of 27) intron (NM_001353690, intron 1 of 27) -50968 NM_001353686 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr12-3354 chr12 92485811 92486021 + 9.90 0.000 Intergenic AluSz6|SINE|Alu 19237 NR_144532 100507616 Hs.339918 NR_144532 LINC02397 - long intergenic non-protein coding RNA 2397 ncRNA chr5-5050 chr5 91079157 91079367 + 9.90 0.000 intron (NR_003149, intron 86 of 89) intron (NR_003149, intron 86 of 89) 235140 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr4-4685 chr4 85952613 85952823 + 9.90 0.000 intron (NM_031305, intron 2 of 6) intron (NM_031305, intron 2 of 6) 22702 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr17-3815 chr17 41813568 41813778 + 9.90 0.000 intron (NM_021939, intron 1 of 9) intron (NM_021939, intron 1 of 9) 963 NM_021939 60681 Hs.463035 NM_021939 ENSG00000141756 FKBP10 BRKS1|FKBP65|OI11|OI6|PPIASE|hFKBP65 FKBP prolyl isomerase 10 protein-coding chr2-11217 chr2 161124421 161124631 + 9.90 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -12429 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr17-3895 chr17 50610749 50610959 + 9.90 0.000 intron (NR_046057, intron 25 of 34) Charlie19a|DNA|hAT-Charlie -24027 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr2-5213 chr2 45412968 45413178 + 9.90 0.000 intron (NM_018079, intron 19 of 20) intron (NM_018079, intron 19 of 20) -158132 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chrX-4268 chrX 41148641 41148851 + 9.90 0.000 intron (NM_001039591, intron 12 of 44) intron (NM_001039591, intron 12 of 44) 63301 NM_001039591 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr12-1252 chr12 48842234 48842444 + 9.90 0.000 intron (NM_004818, intron 3 of 16) SVA_D|Retroposon|SVA 9824 NM_004818 9416 Hs.130098 NM_004818 ENSG00000174243 DDX23 PRPF28|SNRNP100|U5-100K|U5-100KD|prp28 DEAD-box helicase 23 protein-coding chr4-4604 chr4 77043328 77043538 + 9.90 0.000 Intergenic AluJr|SINE|Alu 31477 NM_001348133 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr14-4153 chr14 75864461 75864671 + 9.90 0.000 intron (NM_015072, intron 29 of 31) intron (NM_015072, intron 29 of 31) 117429 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr3-8616 chr3 168847663 168847873 + 9.90 0.000 Intergenic Intergenic -54177 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr22-2396 chr22 10958592 10958802 + 9.90 0.000 intron (NR_132320, intron 3 of 8) intron (NR_132320, intron 3 of 8) 2832 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr7-1715 chr7 2380018 2380228 + 9.90 0.000 intron (NM_001362791, intron 18 of 18) intron (NM_001362791, intron 18 of 18) -23488 NM_001243794 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr5-5105 chr5 99614999 99615209 + 9.90 0.000 Intergenic L2a|LINE|L2 81114 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr8-1515 chr8 69529692 69529902 + 9.90 0.000 intron (NR_156414, intron 2 of 20) MLT1F|LTR|ERVL-MaLR 36950 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr1-14651 chr1 58353914 58354124 + 9.90 0.000 Intergenic Intergenic -103472 NM_001353980 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr19-4556 chr19 10545974 10546184 + 9.90 0.000 intron (NR_104025, intron 3 of 8) AluJr|SINE|Alu 2175 NM_001281504 84971 Hs.512799 NM_032885 ENSG00000130734 ATG4D APG4-D|APG4D|AUTL4 autophagy related 4D cysteine peptidase protein-coding chr10-3544 chr10 76558689 76558899 + 9.90 0.000 3' UTR (NM_001305581, exon 7 of 7) 3' UTR (NM_001305581, exon 7 of 7) -329250 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr2-8058 chr2 72911016 72911226 + 9.90 0.000 Intergenic AluJr|SINE|Alu -6398 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr13-3965 chr13 62068281 62068491 + 9.90 0.000 Intergenic Intergenic -38838 NR_046995 100874143 Hs.552684 NR_046995 ENSG00000229578 LINC00358 - long intergenic non-protein coding RNA 358 ncRNA chr9-3472 chr9 6426832 6427042 + 9.90 0.000 intron (NM_152896, intron 2 of 15) AluSx1|SINE|Alu 13738 NM_152896 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr1-9287 chr1 25834543 25834753 + 9.90 0.000 3' UTR (NM_024037, exon 3 of 3) 3' UTR (NM_024037, exon 3 of 3) -11042 NR_024498 646471 Hs.727271 NR_024498 LOC646471 - uncharacterized LOC646471 ncRNA chr19-2636 chr19 5176830 5177040 + 9.90 0.000 Intergenic AluSq|SINE|Alu 163877 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr8-2637 chr8 69229800 69230010 + 9.90 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -125715 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chrX-2789 chrX 132627245 132627455 + 9.90 0.000 3' UTR (NM_001077188, exon 6 of 6) 3' UTR (NM_001077188, exon 6 of 6) -40292 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr22-2720 chr22 38440353 38440563 + 9.90 0.000 intron (NM_152868, intron 1 of 1) AluSx|SINE|Alu 3570 NM_004981 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr2-8880 chr2 177022702 177022912 + 9.90 0.000 Intergenic AluSx1|SINE|Alu 189604 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr7-4713 chr7 47983968 47984178 + 9.90 0.000 Intergenic Intergenic -4458 NM_004507 3364 Hs.152983 NM_004507 ENSG00000136273 HUS1 hHUS1 HUS1 checkpoint clamp component protein-coding chr16-4306 chr16 28296614 28296824 + 9.90 0.000 intron (NM_001024401, intron 1 of 3) intron (NM_001024401, intron 1 of 3) 4194 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr5-2299 chr5 55037039 55037249 + 9.90 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 12888 NM_002104 3003 Hs.277937 NM_002104 ENSG00000113088 GZMK TRYP2 granzyme K protein-coding chr14-1894 chr14 99554001 99554211 + 9.90 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 50101 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr7-4324 chr7 38551246 38551456 + 9.90 0.000 intron (NM_001635, intron 1 of 20) intron (NM_001635, intron 1 of 20) 80022 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr10-6633 chr10 98851268 98851478 + 9.90 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) 73195 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr3-8009 chr3 187358203 187358413 + 9.90 0.000 Intergenic L2c|LINE|L2 -10077 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding chr4-4264 chr4 21845784 21845994 + 9.90 0.000 non-coding (NR_002813, exon 1 of 1) non-coding (NR_002813, exon 1 of 1) 7299 NR_002813 359822 Hs.354058 NR_002813 ENSG00000280650 KCNIP4-IT1 NCRNA00099|UM9(5)|UM9-5 KCNIP4 intronic transcript 1 ncRNA chr8-2871 chr8 139749192 139749402 + 9.90 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -46174 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr19-4533 chr19 8656511 8656721 + 9.90 0.000 Intergenic Intergenic 42179 NM_178525 284382 Hs.209206 NM_178525 ENSG00000181786 ACTL9 HSD21 actin like 9 protein-coding chr1-6151 chr1 173857357 173857567 + 9.90 0.000 intron (NM_001365212, intron 15 of 15) intron (NM_001365212, intron 15 of 15) -5786 NR_037605 100506046 Hs.656411 NR_037605 GAS5-AS1 - GAS5 antisense RNA 1 ncRNA chr1-11715 chr1 9724895 9725105 + 9.90 0.000 intron (NM_005026, intron 23 of 23) intron (NM_005026, intron 23 of 23) 33533 NM_001350235 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr10-8226 chr10 73538122 73538332 + 9.90 0.000 intron (NR_146997, intron 10 of 21) intron (NR_146997, intron 10 of 21) 15113 NR_135250 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr7-6094 chr7 117698462 117698672 + 9.90 0.000 Intergenic Intergenic -133891 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr5-4861 chr5 64457125 64457335 + 9.90 0.000 Intergenic L2a|LINE|L2 -48785 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr8-1118 chr8 97869331 97869541 + 9.90 0.000 intron (NM_002380, intron 1 of 18) CpG 372 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr18-1737 chr18 6373358 6373568 + 9.90 0.000 TTS (NR_036205) TTS (NR_036205) 962 NR_036205 100422840 NR_036205 ENSG00000283532 MIR4317 - microRNA 4317 ncRNA chr1-12915 chr1 116209284 116209494 + 9.90 0.000 Intergenic Intergenic 97634 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr13-2547 chr13 64650099 64650309 + 9.90 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -574193 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr1-5986 chr1 42643134 42643344 + 9.90 0.000 intron (NM_001080850, intron 13 of 16) MIR|SINE|MIR -15184 NM_001330510 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr3-10854 chr3 167558671 167558881 + 9.90 0.000 intron (NM_001348951, intron 9 of 18) intron (NM_001348951, intron 9 of 18) -84644 NM_001012303 5276 Hs.445555 NM_006217 ENSG00000114204 SERPINI2 MEPI|PANCPIN|PI14|TSA2004 serpin family I member 2 protein-coding chr11-4683 chr11 64163804 64164014 + 9.90 0.000 intron (NM_014067, intron 1 of 10) intron (NM_014067, intron 1 of 10) 2204 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 mono-ADP ribosylhydrolase 1 protein-coding chr6-3221 chr6 139409179 139409389 + 9.90 0.000 Intergenic Intergenic -34636 NM_006079 10370 Hs.82071 NM_006079 ENSG00000164442 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 protein-coding chr12-2192 chr12 11650053 11650263 + 9.90 0.000 exon (NM_001987, exon 1 of 8) exon (NM_001987, exon 1 of 8) 304 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chrX-2084 chrX 21926886 21927096 + 9.90 0.000 Intergenic Charlie5|DNA|hAT-Charlie -13582 NM_001258423 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr4-1964 chr4 139150469 139150679 + 9.90 0.000 intron (NM_001371339, intron 1 of 9) L1ME1|LINE|L1 26644 NM_001371338 chr7-9222 chr7 118592930 118593140 + 9.90 0.000 Intergenic Intergenic 368331 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr16-2190 chr16 73082642 73082852 + 9.90 0.000 Intergenic Intergenic -9602 NR_027756 283902 Hs.382776 NM_001101347 ENSG00000260880 HCCAT5 FJ222407|HTA hepatocellular carcinoma associated transcript 5 ncRNA chr11-1411 chr11 32173444 32173654 + 9.90 0.000 Intergenic Intergenic -29637 NR_132770 106635521 NR_132770 SNORA88 - small nucleolar RNA, H/ACA box 88 snoRNA chr15-2995 chr15 54134480 54134690 + 9.90 0.000 intron (NM_001329919, intron 2 of 31) AluY|SINE|Alu 121937 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr13-2238 chr13 25106938 25107148 + 9.90 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 10905 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr22-1400 chr22 38443399 38443609 + 9.90 0.000 intron (NM_152868, intron 1 of 1) intron (NM_152868, intron 1 of 1) 524 NM_004981 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr11-3823 chr11 67593089 67593299 + 9.90 0.000 Intergenic LTR1|LTR|ERV1 9599 NM_000852 2950 Hs.523836 NM_000852 ENSG00000084207 GSTP1 DFN7|FAEES3|GST3|GSTP|HEL-S-22|PI glutathione S-transferase pi 1 protein-coding chr10-3694 chr10 105983016 105983226 + 9.90 0.000 Intergenic Intergenic -157044 NR_134331 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chrX-642 chrX 29397669 29397879 + 9.90 0.000 intron (NM_014271, intron 4 of 10) intron (NM_014271, intron 4 of 10) -176504 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chrX-1729 chrX 33850799 33851009 + 9.90 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 281426 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr2-4069 chr2 122232561 122232771 + 9.90 0.000 Intergenic Intergenic 477015 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr1-7077 chr1 185040280 185040490 + 9.90 0.000 Intergenic Intergenic -5173 NM_007212 6045 Hs.591490 NM_007212 ENSG00000121481 RNF2 BAP-1|BAP1|DING|HIPI3|RING1B|RING2 ring finger protein 2 protein-coding chr7-6229 chr7 131867865 131868075 + 9.90 0.000 Intergenic MER21A|LTR|ERVL -42250 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr22-2190 chr22 46371022 46371232 + 9.90 0.000 intron (NM_014246, intron 25 of 34) intron (NM_014246, intron 25 of 34) 35413 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr11-5270 chr11 34758458 34758668 + 9.90 0.000 Intergenic Intergenic 125997 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr11-4485 chr11 110273045 110273255 + 9.90 0.000 intron (NM_001260493, intron 2 of 15) AluJr|SINE|Alu 23562 NM_001260495 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr1-5195 chr1 176174277 176174487 + 9.90 0.000 intron (NM_022457, intron 3 of 19) intron (NM_022457, intron 3 of 19) 32862 NM_001286644 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr8-3798 chr8 27677335 27677545 + 9.90 0.000 TTS (NM_182826) TTS (NM_182826) -24237 NR_037417 100500858 NR_037417 ENSG00000284351 MIR3622A mir-3622a microRNA 3622a ncRNA chr11-4387 chr11 76850465 76850675 + 9.90 0.000 Intergenic Intergenic -10348 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr1-7859 chr1 93754129 93754339 + 9.90 0.000 non-coding (NR_148965, exon 2 of 2) non-coding (NR_148965, exon 2 of 2) 21149 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr12-6747 chr12 6633678 6633888 + 9.90 0.000 intron (NM_020400, intron 1 of 1) intron (NM_020400, intron 1 of 1) -2134 NM_001142961 57121 Hs.155538 NM_020400 ENSG00000184574 LPAR5 GPR92|GPR93|KPG_010|LPA5 lysophosphatidic acid receptor 5 protein-coding chr10-4529 chr10 94564586 94564796 + 9.90 0.000 intron (NM_001289075, intron 6 of 20) AluSx1|SINE|Alu 18903 NM_001289075 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding chr7-5509 chr7 44102373 44102583 + 9.90 0.000 Intergenic Intergenic -1867 NM_001129 165 Hs.439463 NM_001129 ENSG00000106624 AEBP1 ACLP AE binding protein 1 protein-coding chr16-3308 chr16 89936681 89936891 + 9.90 0.000 TTS (NM_001197181) TTS (NM_001197181) -11945 NM_001242821 54849 Hs.62771 NM_017702 ENSG00000140995 DEF8 - differentially expressed in FDCP 8 homolog protein-coding chr7-9059 chr7 103835257 103835467 + 9.90 0.000 intron (NM_005045, intron 2 of 64) L1MC1|LINE|L1 154154 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr11-5284 chr11 37272454 37272664 + 9.90 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -666042 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr5-2619 chr5 146329198 146329408 + 9.90 0.000 Intergenic AluSz|SINE|Alu -9536 NM_002700 5459 Hs.553499 NM_002700 ENSG00000091010 POU4F3 BRN3C|DFNA15|DFNA42|DFNA52 POU class 4 homeobox 3 protein-coding chr11-5229 chr11 19515119 19515329 + 9.90 0.000 intron (NR_033989, intron 3 of 3) MIR|SINE|MIR -7995 NR_049725 100874012 Hs.434602 NR_049725 ENSG00000255043 NAV2-AS5 - NAV2 antisense RNA 5 ncRNA chr20-4088 chr20 39607943 39608153 + 9.90 0.000 Intergenic Intergenic -383300 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr15-2477 chr15 90241223 90241433 + 9.90 0.000 exon (NM_001322811, exon 5 of 5) exon (NM_001322811, exon 5 of 5) 7119 NM_001322811 390637 Hs.304673 NM_001013657 ENSG00000183208 GDPGP1 C15orf58|VTC2 GDP-D-glucose phosphorylase 1 protein-coding chr14-1998 chr14 52903200 52903410 + 9.90 0.000 intron (NM_006832, intron 3 of 14) AluJr4|SINE|Alu 47745 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr14-1102 chr14 70018879 70019089 + 9.90 0.000 intron (NM_001034852, intron 10 of 11) intron (NM_001034852, intron 10 of 11) 40851 NR_145786 109623479 NR_145786 SNORD169 - small nucleolar RNA, C/D box 169 snoRNA chr1-7176 chr1 209010549 209010759 + 9.90 0.000 Intergenic Intergenic 38200 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr11-1523 chr11 118692273 118692483 + 9.90 0.000 Intergenic Intergenic -12728 NM_007180 11181 Hs.129712 NM_007180 ENSG00000118094 TREH TRE|TREA|TREHD trehalase protein-coding chr5-2410 chr5 109865654 109865864 + 9.90 0.000 intron (NM_002372, intron 21 of 21) intron (NM_002372, intron 21 of 21) -17423 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr17-6116 chr17 81146632 81146842 + 9.90 0.000 intron (NM_001080395, intron 1 of 13) AluSx1|SINE|Alu -13429 NR_031652 100302229 NR_031652 ENSG00000221025 MIR1250 MIRN1250|hsa-mir-1250|mir-1250 microRNA 1250 ncRNA chr6-1828 chr6 150508046 150508256 + 9.90 0.000 Intergenic SVA_F|Retroposon|SVA -91734 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr8-4523 chr8 122694813 122695023 + 9.90 0.000 promoter-TSS (NR_126348) promoter-TSS (NR_126348) -812 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr3-6101 chr3 52806937 52807147 + 9.90 0.000 exon (NM_002217, exon 19 of 22) exon (NM_002217, exon 19 of 22) 12274 NM_002217 3699 Hs.76716 NM_002217 ENSG00000162267 ITIH3 H3P|ITI-HC3|SHAP inter-alpha-trypsin inhibitor heavy chain 3 protein-coding chr4-6520 chr4 165733405 165733615 + 9.90 0.000 intron (NR_121676, intron 4 of 5) intron (NR_121676, intron 4 of 5) 9561 NR_121677 101928131 Hs.406479 NR_121677 LOC101928131 - uncharacterized LOC101928131 ncRNA chr8-2300 chr8 128981494 128981704 + 9.90 0.000 Intergenic Intergenic -15598 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA chr7-6245 chr7 134388165 134388375 + 9.90 0.000 Intergenic L1M6|LINE|L1 70830 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr7-3137 chr7 55202693 55202903 + 9.90 0.000 3' UTR (NM_001346898, exon 27 of 27) 3' UTR (NM_001346898, exon 27 of 27) -13849 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr21-309 chr21 45012508 45012718 + 9.90 0.000 Intergenic Intergenic -7886 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr1-16297 chr1 215152848 215153058 + 9.90 0.000 intron (NM_001017424, intron 3 of 6) intron (NM_001017424, intron 3 of 6) 70216 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr19-3187 chr19 46534315 46534525 + 9.90 0.000 intron (NM_001370550, intron 1 of 2) intron (NM_001370550, intron 1 of 2) -38553 NM_020709 57469 Hs.7193 NM_020709 ENSG00000204851 PNMA8B PNMAL2 PNMA family member 8B protein-coding chr8-1277 chr8 22989400 22989610 + 9.90 0.000 intron (NM_001160036, intron 1 of 11) intron (NM_001160036, intron 1 of 11) 2254 NM_001160036 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr2-8106 chr2 77589320 77589530 + 9.90 0.000 Intergenic LTR89|LTR|ERVL? -66992 NM_001282924 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr19-2194 chr19 18298667 18298877 + 9.90 0.000 Intergenic Intergenic 16695 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA chr3-6687 chr3 131651677 131651887 + 9.90 0.000 intron (NM_130808, intron 7 of 15) intron (NM_130808, intron 7 of 15) -148811 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr8-5265 chr8 135859415 135859625 + 9.90 0.000 Intergenic MER8|DNA|TcMar-Tigger 402064 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chrX-3086 chrX 132022488 132022698 + 9.90 0.000 promoter-TSS (NM_001042452) promoter-TSS (NM_001042452) -709 NM_001042453 51765 Hs.444247 NM_016542 ENSG00000134602 STK26 MASK|MST4 serine/threonine kinase 26 protein-coding chr3-3003 chr3 101495642 101495852 + 9.90 0.000 intron (NM_001282804, intron 1 of 4) L1PA11|LINE|L1 17465 NM_001077203 57337 Hs.529551 NM_020654 ENSG00000138468 SENP7 - SUMO specific peptidase 7 protein-coding chr11-6125 chr11 38971219 38971429 + 9.90 0.000 Intergenic Intergenic 322466 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr14-2590 chr14 51026214 51026424 + 9.90 0.000 intron (NM_015163, intron 1 of 9) MLT1L|LTR|ERVL-MaLR 69385 NM_015163 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr5-6503 chr5 342383 342593 + 9.90 0.000 intron (NM_020731, intron 1 of 11) L1MD|LINE|L1 38312 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr5-6763 chr5 82839713 82839923 + 9.90 0.000 promoter-TSS (NR_039773) promoter-TSS (NR_039773) -337 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr2-8953 chr2 188836689 188836899 + 9.90 0.000 Intergenic L1MA8|LINE|L1 -46671 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr14-2778 chr14 20412478 20412688 + 9.90 0.000 intron (NM_001319035, intron 1 of 52) L1ME4b|LINE|L1 918 NM_001319035 7011 Hs.508835 NM_007110 ENSG00000129566 TEP1 TLP1|TP1|TROVE1|VAULT2|p240 telomerase associated protein 1 protein-coding chr11-6618 chr11 73944875 73945085 + 9.90 0.000 Intergenic HERVK14-int|LTR|ERVK -5339 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr20-1375 chr20 57807207 57807417 + 9.90 0.000 Intergenic LTR16E1|LTR|ERVL -95776 NM_199171 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr2-6174 chr2 241570107 241570317 + 9.90 0.000 exon (NM_032515, exon 4 of 5) exon (NM_032515, exon 4 of 5) -11069 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr5-2944 chr5 148799983 148800193 + 9.90 0.000 Intergenic Intergenic -26505 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chrX-1439 chrX 64070176 64070386 + 9.90 0.000 Intergenic L1MA2|LINE|L1 135427 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding chr6-6324 chr6 47424971 47425181 + 9.90 0.000 Intergenic MER72|LTR|ERV1 -52713 NM_012120 23607 Hs.485518 NM_012120 ENSG00000198087 CD2AP CMS CD2 associated protein protein-coding chr3-7140 chr3 185079714 185079924 + 9.90 0.000 3' UTR (NM_001025266, exon 2 of 2) 3' UTR (NM_001025266, exon 2 of 2) 73241 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr4-7268 chr4 48316178 48316388 + 9.90 0.000 Intergenic Intergenic -25246 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr22-2159 chr22 42268911 42269121 + 9.90 0.000 promoter-TSS (NR_036498) promoter-TSS (NR_036498) -737 NR_036498 388906 Hs.730075 NR_036498 OGFRP1 - opioid growth factor receptor pseudogene 1 pseudo chr11-10579 chr11 122841808 122842018 + 9.90 0.000 intron (NM_019604, intron 1 of 9) L2c|LINE|L2 3413 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr11-3937 chr11 133933905 133934115 + 9.90 0.000 intron (NM_001277285, intron 7 of 19) intron (NM_001277285, intron 7 of 19) 22786 NM_001277285 22997 Hs.204121 NM_014987 ENSG00000080854 IGSF9B - immunoglobulin superfamily member 9B protein-coding chr3-3734 chr3 192869782 192869992 + 9.90 0.000 intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) 47969 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr7-856 chr7 44748529 44748739 + 9.90 0.000 promoter-TSS (NM_031449) promoter-TSS (NM_031449) 68 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr5-5402 chr5 135378056 135378266 + 9.90 0.000 intron (NM_138609, intron 2 of 8) intron (NM_138609, intron 2 of 8) 21077 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr12-1357 chr12 43836201 43836411 + 9.90 0.000 intron (NM_001286213, intron 1 of 6) CpG 225 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr10-7306 chr10 132685215 132685425 + 9.90 0.000 intron (NM_001321042, intron 1 of 12) intron (NM_001321042, intron 1 of 12) 4045 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr15-3549 chr15 101484684 101484894 + 9.90 0.000 intron (NM_138325, intron 1 of 13) L1ME3Cz|LINE|L1 4918 NM_002570 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr2-13691 chr2 164976408 164976618 + 9.90 0.000 Intergenic Intergenic -20988 NM_001351540 151258 Hs.658702 NM_173512 ENSG00000169507 SLC38A11 AVT2 solute carrier family 38 member 11 protein-coding chr3-9634 chr3 59665468 59665678 + 9.90 0.000 Intergenic L2c|LINE|L2 -7076 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr10-8635 chr10 98930178 98930388 + 9.90 0.000 intron (NM_021828, intron 3 of 11) L1PA10|LINE|L1 -5715 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr6-2289 chr6 85772260 85772470 + 9.90 0.000 Intergenic L1PA13|LINE|L1 -93632 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr3-7950 chr3 159914446 159914656 + 9.90 0.000 intron (NR_108088, intron 9 of 9) intron (NR_108088, intron 9 of 9) -74284 NM_000882 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr7-5594 chr7 49868045 49868255 + 9.90 0.000 intron (NR_136188, intron 2 of 3) intron (NR_136188, intron 2 of 3) 92817 NR_136188 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr9-3366 chr9 123579595 123579805 + 9.90 0.000 intron (NM_001352968, intron 11 of 18) intron (NM_001352968, intron 11 of 18) -94078 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr11-3673 chr11 128503593 128503803 + 9.90 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 18612 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr15-1454 chr15 88570410 88570620 + 9.90 0.000 Intergenic MER5B|DNA|hAT-Charlie -23812 NR_026645 55070 Hs.655064 NM_017996 ENSG00000140543 DET1 - DET1 partner of COP1 E3 ubiquitin ligase protein-coding chr17-3775 chr17 35094923 35095133 + 9.90 0.000 non-coding (NR_037712, exon 8 of 8) non-coding (NR_037712, exon 8 of 8) -5802 NR_037713 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr9-3089 chr9 32791227 32791437 + 9.90 0.000 Intergenic Intergenic 7792 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr11-6633 chr11 74646359 74646569 + 9.90 0.000 Intergenic Intergenic 53882 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chrX-2419 chrX 75421881 75422091 + 9.90 0.000 exon (NM_144969, exon 9 of 12) exon (NM_144969, exon 9 of 12) 101051 NM_144969 158866 Hs.253211 NM_144969 ENSG00000102383 ZDHHC15 DHHC15|MRX91 zinc finger DHHC-type containing 15 protein-coding chr4-4698 chr4 87188282 87188492 + 9.90 0.000 intron (NM_020803, intron 2 of 9) intron (NM_020803, intron 2 of 9) 31881 NM_001292003 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr2-8532 chr2 131177895 131178105 + 9.90 0.000 Intergenic Intergenic -40351 NM_001083538 445582 Hs.686146 NM_001004054 ENSG00000188219 POTEE A26C1|A26C1A|CT104.2|POTE-2|POTE2|POTE2gamma POTE ankyrin domain family member E protein-coding chr11-10691 chr11 129190696 129190906 + 9.90 0.000 intron (NM_001142685, intron 1 of 21) intron (NM_001142685, intron 1 of 21) 1397 NM_001142685 9743 Hs.440379 NM_014715 ENSG00000134909 ARHGAP32 GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP Rho GTPase activating protein 32 protein-coding chr3-5922 chr3 42602017 42602227 + 9.90 0.000 intron (NM_001349126, intron 2 of 18) Tigger3a|DNA|TcMar-Tigger -1044 NM_001201572 9117 Hs.445892 NM_004206 ENSG00000093183 SEC22C SEC22L3 SEC22 homolog C, vesicle trafficking protein protein-coding chr9-4497 chr9 37672305 37672515 + 9.90 0.000 intron (NM_001371223, intron 1 of 15) intron (NM_001371223, intron 1 of 15) 4401 NM_001371223 chr3-6192 chr3 61487956 61488166 + 9.90 0.000 Intergenic MIRb|SINE|MIR -73510 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr4-3888 chr4 143084388 143084598 + 9.90 0.000 Intergenic L2a|LINE|L2 100368 NR_136203 105377623 NR_136203 ENSG00000250326 LOC105377623 - uncharacterized LOC105377623 ncRNA chr6-2300 chr6 105180220 105180430 + 9.90 0.000 promoter-TSS (NM_022361) promoter-TSS (NM_022361) -311 NM_022361 64208 Hs.458336 NM_022361 ENSG00000132429 POPDC3 POP3|bA355M14.1 popeye domain containing 3 protein-coding chr2-7764 chr2 39657715 39657925 + 9.90 0.000 Intergenic Intergenic -7678 NM_001167959 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr2-4217 chr2 213932703 213932913 + 9.90 0.000 intron (NR_047660, intron 11 of 14) intron (NR_047660, intron 11 of 14) 174741 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr4-2490 chr4 11698021 11698231 + 9.90 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 71342 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr1-10119 chr1 100836200 100836410 + 9.90 0.000 Intergenic Intergenic 58537 NM_001033025 2135 Hs.357637 NM_001439 ENSG00000162694 EXTL2 EXTR2 exostosin like glycosyltransferase 2 protein-coding chr4-3355 chr4 6194714 6194924 + 9.90 0.000 promoter-TSS (NM_001306134) promoter-TSS (NM_001306134) -200 NM_001306133 152789 Hs.479066 NM_144720 ENSG00000152969 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding chr5-5323 chr5 127934023 127934233 + 9.90 0.000 intron (NM_001317938, intron 6 of 6) intron (NM_001317938, intron 6 of 6) 149047 NR_152811 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA chr10-5038 chr10 35306961 35307171 + 9.90 0.000 intron (NM_181698, intron 3 of 11) intron (NM_181698, intron 3 of 11) -29443 NM_145012 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr20-1850 chr20 19993151 19993361 + 9.90 0.000 intron (NM_001242581, intron 10 of 11) intron (NM_001242581, intron 10 of 11) -24034 NM_181528 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr13-2657 chr13 80934273 80934483 + 9.90 0.000 Intergenic MSTA|LTR|ERVL-MaLR -84013 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA chr2-2712 chr2 66433441 66433651 + 9.90 0.000 promoter-TSS (NR_046438) promoter-TSS (NR_046438) -76 NR_046438 730198 Hs.526753 NR_046438 MEIS1-AS3 - MEIS1 antisense RNA 3 ncRNA chr13-1957 chr13 107078395 107078605 + 9.90 0.000 Intergenic Intergenic 242463 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chr8-6161 chr8 32132540 32132750 + 9.90 0.000 intron (NR_104156, intron 3 of 3) intron (NR_104156, intron 3 of 3) 106427 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr18-977 chr18 79506819 79507029 + 9.90 0.000 intron (NM_001278673, intron 8 of 8) intron (NM_001278673, intron 8 of 8) -72358 NR_148949 284240 Hs.448912 NR_148949 LOC284240 - uncharacterized LOC284240 ncRNA chr1-5894 chr1 8449367 8449577 + 9.90 0.000 intron (NM_001042681, intron 11 of 22) intron (NM_001042681, intron 11 of 22) 24827 NR_125999 102724552 Hs.568612 NR_125999 RERE-AS1 - RERE antisense RNA 1 ncRNA chr15-1759 chr15 63194022 63194232 + 9.90 0.000 intron (NM_016530, intron 1 of 7) intron (NM_016530, intron 1 of 7) 4521 NM_016530 51762 Hs.389733 NM_016530 ENSG00000166128 RAB8B - RAB8B, member RAS oncogene family protein-coding chr1-8669 chr1 210823165 210823375 + 9.90 0.000 intron (NM_002238, intron 7 of 10) intron (NM_002238, intron 7 of 10) 310104 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA chr5-4184 chr5 109572182 109572392 + 9.90 0.000 Intergenic Intergenic -117079 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr5-4605 chr5 31637976 31638186 + 9.90 0.000 Intergenic Intergenic -1050 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr1-6701 chr1 54625265 54625475 + 9.90 0.000 intron (NM_015547, intron 15 of 16) intron (NM_015547, intron 15 of 16) -1845 NM_176782 338094 Hs.234786 NM_176782 ENSG00000162391 FAM151A C1orf179 family with sequence similarity 151 member A protein-coding chr16-4363 chr16 46850782 46850992 + 9.90 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -19707 NM_001348660 388272 Hs.406551 NM_001001436 ENSG00000155330 C16orf87 - chromosome 16 open reading frame 87 protein-coding chr13-1272 chr13 113298562 113298772 + 9.90 0.000 intron (NM_005561, intron 1 of 8) intron (NM_005561, intron 1 of 8) 1428 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr2-6083 chr2 167222294 167222504 + 9.90 0.000 intron (NM_001199144, intron 3 of 8) intron (NM_001199144, intron 3 of 8) 35027 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr4-1865 chr4 182978583 182978793 + 9.90 0.000 Intergenic L1PBa1|LINE|L1 -58977 NR_003612 403315 Hs.652187 NR_003612 ENSG00000230219 FAM92A1P2 FAM92A3 family with sequence similarity 92, member A3 pseudo chr2-6373 chr2 108922367 108922577 + 9.90 0.000 intron (NM_022336, intron 5 of 11) intron (NM_022336, intron 5 of 11) 66748 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr19-1989 chr19 5828108 5828318 + 9.90 0.000 3' UTR (NM_004558, exon 2 of 2) 3' UTR (NM_004558, exon 2 of 2) 4411 NM_004558 4902 Hs.234775 NM_004558 ENSG00000171119 NRTN NTN neurturin protein-coding chr6-1648 chr6 138886404 138886614 + 9.90 0.000 intron (NM_001077706, intron 18 of 21) AluSz|SINE|Alu 90398 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr7-9211 chr7 117052586 117052796 + 9.90 0.000 intron (NR_161419, intron 1 of 15) AluY|SINE|Alu 32473 NM_001369606 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr3-10042 chr3 104080365 104080575 + 9.90 0.000 Intergenic Intergenic -556354 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr18-2189 chr18 60308292 60308502 + 9.90 0.000 Intergenic Intergenic 64378 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr7-2481 chr7 3302259 3302469 + 9.90 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 1112 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr11-6828 chr11 95109100 95109310 + 9.90 0.000 intron (NM_015036, intron 1 of 1) L3|LINE|CR1 19359 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding chr15-4438 chr15 45582582 45582792 + 9.90 0.000 Intergenic Intergenic -4436 NR_132352 26258 Hs.7037 NM_012388 ENSG00000104164 BLOC1S6 BLOS6|HPS9|PA|PALLID|PLDN biogenesis of lysosomal organelles complex 1 subunit 6 protein-coding chr8-1881 chr8 22566090 22566300 + 9.90 0.000 intron (NM_001018003, intron 1 of 9) intron (NM_001018003, intron 1 of 9) 466 NM_001018003 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr20-2257 chr20 2700697 2700907 + 9.90 0.000 intron (NM_001110514, intron 2 of 17) intron (NM_001110514, intron 2 of 17) 7924 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr12-3336 chr12 89756798 89757008 + 9.90 0.000 Intergenic Intergenic -47537 NM_001366526 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr6-1831 chr6 157152220 157152430 + 9.90 0.000 intron (NM_020732, intron 9 of 19) intron (NM_020732, intron 9 of 19) 115898 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr17-5380 chr17 31730933 31731143 + 9.90 0.000 Intergenic Intergenic 127924 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr2-5101 chr2 17050728 17050938 + 9.90 0.000 Intergenic L2c|LINE|L2 -384999 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr13-1256 chr13 103101967 103102177 + 9.90 0.000 Intergenic Intergenic -35655 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr3-6653 chr3 128563466 128563676 + 9.90 0.000 Intergenic MER63A|DNA|hAT-Blackjack 12515 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr1-10101 chr1 98035657 98035867 + 9.90 0.000 intron (NR_046105, intron 3 of 4) intron (NR_046105, intron 3 of 4) 9589 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr10-3230 chr10 108410831 108411041 + 9.90 0.000 Intergenic L1ME4c|LINE|L1 -341643 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr11-5547 chr11 96075802 96076012 + 9.90 0.000 intron (NM_032427, intron 2 of 4) intron (NM_032427, intron 2 of 4) -151700 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chrX-2870 chrX 143989548 143989758 + 9.90 0.000 Intergenic Intergenic 105582 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chrX-2682 chrX 118226164 118226374 + 9.90 0.000 Intergenic Intergenic -108929 NM_001168301 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr6-5285 chr6 139433696 139433906 + 9.90 0.000 Intergenic Intergenic 40795 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr9-5595 chr9 114317906 114318116 + 9.90 0.000 Intergenic Zaphod|DNA|hAT-Tip100 -5012 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr3-11052 chr3 183291559 183291769 + 9.90 0.000 intron (NM_015078, intron 13 of 29) intron (NM_015078, intron 13 of 29) 38411 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr18-2007 chr18 42276523 42276733 + 9.90 0.000 intron (NR_046454, intron 3 of 6) intron (NR_046454, intron 3 of 6) 89960 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr4-1239 chr4 2388518 2388728 + 9.90 0.000 intron (NM_020972, intron 1 of 12) intron (NM_020972, intron 1 of 12) -23809 NM_001172659 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr4-2238 chr4 150261689 150261899 + 9.90 0.000 Intergenic Intergenic 183349 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr6-6034 chr6 121094068 121094278 + 9.90 0.000 intron (NR_104452, intron 34 of 35) intron (NR_104452, intron 34 of 35) 240307 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr18-3372 chr18 58781702 58781912 + 9.90 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -32073 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr15-3803 chr15 72381869 72382079 + 9.90 0.000 Intergenic MIRb|SINE|MIR 5861 NR_027262 80072 Hs.591113 NM_025005 ENSG00000260339 HEXA-AS1 C15orf34 HEXA antisense RNA 1 ncRNA chr6-4872 chr6 89265669 89265879 + 9.90 0.000 intron (NM_002043, intron 6 of 8) intron (NM_002043, intron 6 of 8) -34486 NM_001267582 2569 Hs.99927 NM_002042 ENSG00000146276 GABRR1 - gamma-aminobutyric acid type A receptor rho1 subunit protein-coding chr4-6232 chr4 61627981 61628191 + 9.90 0.000 intron (NM_001371343, intron 5 of 23) MIR|SINE|MIR 425914 NM_001371342 chr3-10351 chr3 127866006 127866216 + 9.90 0.000 Intergenic HAL1b|LINE|L1 -42861 NM_001003794 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr5-4203 chr5 116983052 116983262 + 9.90 0.000 Intergenic Intergenic -220948 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chrX-1960 chrX 8905981 8906191 + 9.90 0.000 Intergenic Intergenic -104703 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr3-2386 chr3 178393673 178393883 + 9.90 0.000 Intergenic MLT2B2|LTR|ERVL -25423 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr9-3746 chr9 122005553 122005763 + 9.90 0.000 intron (NM_194252, intron 3 of 3) intron (NM_194252, intron 3 of 3) 87948 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr6-5755 chr6 157535585 157535795 + 9.90 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 6558 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr7-2605 chr7 148856573 148856783 + 9.90 0.000 intron (NM_001203247, intron 1 of 19) L1MC3|LINE|L1 26807 NM_001203249 2146 Hs.444082 NM_004456 ENSG00000106462 EZH2 ENX-1|ENX1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding chr2-8104 chr2 77448137 77448347 + 9.90 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) 74134 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr4-5030 chr4 140598984 140599194 + 9.90 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -30128 NM_021833 7350 Hs.249211 NM_021833 ENSG00000109424 UCP1 SLC25A7|UCP uncoupling protein 1 protein-coding chr1-7135 chr1 204254169 204254379 + 9.90 0.000 intron (NM_014935, intron 9 of 22) intron (NM_014935, intron 9 of 22) -40286 NM_198447 127845 Hs.532401 NM_198447 ENSG00000174567 GOLT1A CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b golgi transport 1A protein-coding chr4-4807 chr4 106453969 106454179 + 9.90 0.000 TTS (NR_147150) TTS (NR_147150) 20450 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA chr2-8453 chr2 121375787 121375997 + 9.90 0.000 intron (NM_015282, intron 33 of 38) intron (NM_015282, intron 33 of 38) -90690 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr11-9242 chr11 42178995 42179205 + 9.90 0.000 Intergenic MIRb|SINE|MIR 74590 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr1-9112 chr1 17567862 17568072 + 9.90 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) -12586 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr3-4141 chr3 122563590 122563800 + 9.90 0.000 promoter-TSS (NM_138287) promoter-TSS (NM_138287) 605 NM_001146105 83666 Hs.518200 NM_031458 ENSG00000138496 PARP9 ARTD9|BAL|BAL1|MGC:7868 poly(ADP-ribose) polymerase family member 9 protein-coding chr7-2073 chr7 155957824 155958034 + 9.90 0.000 Intergenic (TAGCA)n|Simple_repeat|Simple_repeat -3290 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr2-5862 chr2 239202102 239202312 + 9.90 0.000 intron (NM_006037, intron 3 of 26) intron (NM_006037, intron 3 of 26) -6750 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr14-1074 chr14 104874545 104874755 + 9.90 0.000 intron (NM_001112726, intron 2 of 18) intron (NM_001112726, intron 2 of 18) 9336 NR_162135 113219454 NR_162135 MIR12121 - microRNA 12121 ncRNA chr13-1483 chr13 106983099 106983309 + 9.90 0.000 Intergenic MER1A|DNA|hAT-Charlie 329324 NR_047026 100874173 Hs.569297 NR_047026 ENSG00000230156 LINC00443 - long intergenic non-protein coding RNA 443 ncRNA chr1-11101 chr1 229871511 229871721 + 9.90 0.000 Intergenic Intergenic 14202 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr3-3005 chr3 102319609 102319819 + 9.90 0.000 Intergenic L1PA15|LINE|L1 -115301 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr1-5577 chr1 1899014 1899224 + 9.90 0.000 Intergenic Intergenic -8002 NM_001282538 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr10-3970 chr10 116498474 116498684 + 9.90 0.000 Intergenic HERV9N-int|LTR|ERV1 -47352 NM_000936 5406 Hs.501135 NM_000936 ENSG00000175535 PNLIP PL|PNLIPD|PTL pancreatic lipase protein-coding chr1-3281 chr1 228364722 228364932 + 9.90 0.000 intron (NM_001271223, intron 91 of 115) intron (NM_001271223, intron 91 of 115) 32282 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr1-9168 chr1 20318056 20318266 + 9.90 0.000 intron (NM_001039500, intron 5 of 21) intron (NM_001039500, intron 5 of 21) 27286 NM_001039500 127731 Hs.205178 NM_144623 ENSG00000158816 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding chr10-6888 chr10 34187159 34187369 + 9.90 0.000 intron (NM_001184789, intron 20 of 22) intron (NM_001184789, intron 20 of 22) -414584 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr19-6406 chr19 14296567 14296777 + 9.90 0.000 Intergenic Intergenic -37071 NR_134916 101928845 Hs.531617 NR_134916 ENSG00000267147 LINC01842 - long intergenic non-protein coding RNA 1842 ncRNA chrX-3059 chrX 107664140 107664350 + 9.90 0.000 Intergenic FAM|SINE|Alu 35821 NM_001204402 5631 Hs.56 NM_002764 ENSG00000147224 PRPS1 ARTS|CMTX5|DFN2|DFNX1|PPRibP|PRS-I|PRSI phosphoribosyl pyrophosphate synthetase 1 protein-coding chr21-1097 chr21 34141940 34142150 + 9.90 0.000 intron (NM_032476, intron 2 of 2) intron (NM_032476, intron 2 of 2) -38632 NR_027267 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA chr10-7326 chr10 245219 245429 + 9.90 0.000 intron (NM_001370109, intron 9 of 13) intron (NM_001370109, intron 9 of 13) 65330 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr14-3207 chr14 73496695 73496905 + 9.90 0.000 intron (NM_001220484, intron 14 of 17) intron (NM_001220484, intron 14 of 17) 5867 NM_024644 79697 Hs.509916 NM_024644 ENSG00000170468 RIOX1 C14orf169|JMJD9|MAPJD|NO66|ROX|URLC2|hsNO66 ribosomal oxygenase 1 protein-coding chrX-1147 chrX 39946934 39947144 + 9.90 0.000 Intergenic Intergenic 109478 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr5-8748 chr5 146762083 146762293 + 9.90 0.000 intron (NM_001271899, intron 2 of 9) intron (NM_001271899, intron 2 of 9) 116597 NM_001271948 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr2-8669 chr2 149467049 149467259 + 9.90 0.000 intron (NM_194317, intron 3 of 4) intron (NM_194317, intron 3 of 4) -120204 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr22-1933 chr22 46538706 46538916 + 9.90 0.000 Intergenic CpG-19239 -1191 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr11-4304 chr11 68284866 68285076 + 9.90 0.000 Intergenic L1ME3B|LINE|L1 -12998 NM_001300913 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr6-3735 chr6 6324874 6325084 + 9.90 0.000 Intergenic LTR33A|LTR|ERVL -4288 NM_000129 2162 Hs.335513 NM_000129 ENSG00000124491 F13A1 F13A coagulation factor XIII A chain protein-coding chr18-1898 chr18 30588612 30588822 + 9.90 0.000 Intergenic L2a|LINE|L2 289807 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr5-7909 chr5 76614184 76614394 + 9.90 0.000 intron (NM_006633, intron 13 of 35) intron (NM_006633, intron 13 of 35) 5194 NM_001285462 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr12-3308 chr12 79407972 79408182 + 9.90 0.000 intron (NM_001291901, intron 8 of 9) intron (NM_001291901, intron 8 of 9) -11180 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr12-3265 chr12 67358968 67359178 + 9.90 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 83486 NR_146500 102724433 NR_146500 ENSG00000256172 LINC02420 - long intergenic non-protein coding RNA 2420 ncRNA chr17-3755 chr17 30370400 30370610 + 9.90 0.000 Intergenic (AAACA)n|Simple_repeat|Simple_repeat -8422 NM_001304 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr20-645 chr20 2698392 2698602 + 9.90 0.000 intron (NM_001110514, intron 2 of 17) intron (NM_001110514, intron 2 of 17) 5619 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr8-3531 chr8 119442706 119442916 + 9.90 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 26365 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr12-6483 chr12 102433882 102434092 + 9.90 0.000 intron (NM_000618, intron 2 of 3) intron (NM_000618, intron 2 of 3) 44563 NM_001111284 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr4-5027 chr4 140488564 140488774 + 9.90 0.000 intron (NM_001277353, intron 1 of 10) intron (NM_001277353, intron 1 of 10) 9624 NM_001277353 152586 Hs.189067 NM_001034840 ENSG00000205301 MGAT4D GnT1IP MGAT4 family member D protein-coding chr13-4379 chr13 108379374 108379584 + 9.90 0.000 Intergenic Intergenic 109850 NM_001145645 10673 Hs.525157 NM_006573 ENSG00000102524 TNFSF13B BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4 TNF superfamily member 13b protein-coding chrX-925 chrX 21982209 21982419 + 9.90 0.000 intron (NM_004595, intron 7 of 10) AluY|SINE|Alu 41605 NM_004595 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr13-2625 chr13 77390902 77391112 + 9.90 0.000 Intergenic Intergenic -63913 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr4-2116 chr4 58457770 58457980 + 9.90 0.000 Intergenic LTR12C|LTR|ERV1 78453 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr3-6987 chr3 168958043 168958253 + 9.90 0.000 Intergenic Intergenic 56203 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr2-7605 chr2 26274226 26274436 + 9.90 0.000 intron (NM_001281512, intron 5 of 14) intron (NM_001281512, intron 5 of 14) 29392 NM_000183 3032 Hs.515848 NM_000183 ENSG00000138029 HADHB ECHB|MSTP029|MTPB|TP-BETA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta protein-coding chr1-10456 chr1 160856199 160856409 + 9.90 0.000 intron (NM_001166664, intron 1 of 7) intron (NM_001166664, intron 1 of 7) 6583 NM_001166663 51744 Hs.157872 NM_016382 ENSG00000122223 CD244 2B4|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 molecule protein-coding chr1-9787 chr1 56950420 56950630 + 9.90 0.000 intron (NM_000066, intron 5 of 11) intron (NM_000066, intron 5 of 11) 15490 NM_000066 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr15-3724 chr15 52331861 52332071 + 9.90 0.000 intron (NM_001142495, intron 32 of 39) intron (NM_001142495, intron 32 of 39) -36162 NM_018728 55930 Hs.487036 NM_018728 ENSG00000128833 MYO5C - myosin VC protein-coding chr17-7142 chr17 77903219 77903429 + 9.90 0.000 Intergenic L2a|LINE|L2 -19237 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr16-1876 chr16 83973955 83974165 + 9.90 0.000 intron (NM_019065, intron 2 of 12) intron (NM_019065, intron 2 of 12) 5412 NM_001329749 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr20-1376 chr20 62051331 62051541 + 9.90 0.000 intron (NM_003185, intron 1 of 14) intron (NM_003185, intron 1 of 14) -13366 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr9-5612 chr9 117079079 117079289 + 9.90 0.000 intron (NM_014010, intron 4 of 21) AluJb|SINE|Alu 102017 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr1-6484 chr1 21666673 21666883 + 9.90 0.000 intron (NM_001145657, intron 1 of 26) intron (NM_001145657, intron 1 of 26) 2579 NM_001350525 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chrX-2381 chrX 69531788 69531998 + 9.90 0.000 3' UTR (NM_015686, exon 3 of 3) 3' UTR (NM_015686, exon 3 of 3) 26658 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr11-8053 chr11 25977497 25977707 + 9.90 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -211521 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr18-2288 chr18 76978048 76978258 + 9.90 0.000 TTS (NM_001025092) TTS (NM_001025092) 38902 NM_001025081 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr7-6189 chr7 129750179 129750389 + 9.90 0.000 intron (NM_001293163, intron 11 of 11) intron (NM_001293163, intron 11 of 11) 20208 NR_029614 406958 NR_029614 ENSG00000207990 MIR182 MIRN182|miRNA182|mir-182 microRNA 182 ncRNA chr12-1183 chr12 66130743 66130953 + 9.90 0.000 promoter-TSS (NR_125724) promoter-TSS (NR_125724) 97 NR_125724 103625681 Hs.504820 NR_125724 ENSG00000239335 LLPH-DT LLPH-AS1 LLPH divergent transcript ncRNA chr16-4247 chr16 21041961 21042171 + 9.90 0.000 exon (NM_017539, exon 32 of 62) exon (NM_017539, exon 32 of 62) 108780 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr7-5844 chr7 87875213 87875423 + 9.90 0.000 intron (NM_018843, intron 1 of 11) intron (NM_018843, intron 1 of 11) 1042 NM_018843 55972 Hs.208414 NM_018843 ENSG00000075303 SLC25A40 MCFP solute carrier family 25 member 40 protein-coding chr12-4975 chr12 77265102 77265312 + 9.90 0.000 Intergenic L2a|LINE|L2 -199638 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chrX-2464 chrX 82826966 82827176 + 9.90 0.000 Intergenic Intergenic -681219 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr12-2130 chr12 89019659 89019869 + 9.90 0.000 promoter-TSS (NR_038385) promoter-TSS (NR_038385) -72 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr8-3622 chr8 144189218 144189428 + 9.90 0.000 intron (NM_001099281, intron 6 of 11) intron (NM_001099281, intron 6 of 11) 40678 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr16-4124 chr16 3358915 3359125 + 9.90 0.000 Intergenic Intergenic 3131 NM_012368 4993 Hs.258574 NM_012368 ENSG00000168158 OR2C1 OLFmf3|OR2C2P olfactory receptor family 2 subfamily C member 1 protein-coding chr5-3866 chr5 136677456 136677666 + 9.90 0.000 Intergenic L1ME2z|LINE|L1 -312085 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr22-1122 chr22 39437248 39437458 + 9.90 0.000 TTS (NR_040535) TTS (NR_040535) 5193 NR_040535 100506472 Hs.729080 NR_040535 LOC100506472 - uncharacterized LOC100506472 ncRNA chr10-1699 chr10 30423546 30423756 + 9.90 0.000 Intergenic Intergenic -10370 NM_001244134 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding chr9-6472 chr9 91410492 91410702 + 9.90 0.000 exon (NM_001290000, exon 2 of 2) exon (NM_001290000, exon 2 of 2) 13235 NM_005384 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr1-15858 chr1 181553438 181553648 + 9.90 0.000 intron (NM_001205293, intron 3 of 47) L1P3|LINE|L1 70026 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr7-1743 chr7 32058964 32059174 + 9.90 0.000 intron (NM_001191059, intron 2 of 18) intron (NM_001191059, intron 2 of 18) 11338 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr2-8394 chr2 113716253 113716463 + 9.90 0.000 intron (NM_001330316, intron 14 of 14) HAL1|LINE|L1 5010 NR_039943 100616208 NR_039943 ENSG00000265429 MIR4782 - microRNA 4782 ncRNA chr18-1079 chr18 44716041 44716251 + 9.90 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 35258 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr17-6045 chr17 79239248 79239458 + 9.90 0.000 intron (NM_001082575, intron 3 of 14) intron (NM_001082575, intron 3 of 14) 164416 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr7-4746 chr7 68756302 68756512 + 9.90 0.000 Intergenic Intergenic 736154 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr10-4014 chr10 810323 810533 + 9.90 0.000 3' UTR (NM_015155, exon 18 of 18) 3' UTR (NM_015155, exon 18 of 18) -120760 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr14-2063 chr14 68208436 68208646 + 9.90 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 384949 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr3-5360 chr3 145052849 145053059 + 9.90 0.000 Intergenic ERVL-B4-int|LTR|ERVL 1016231 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr6-1927 chr6 43870932 43871142 + 9.90 0.000 Intergenic MIRb|SINE|MIR -18704 NR_149142 285857 Hs.582798 NR_149142 ENSG00000283215 LINC02537 - long intergenic non-protein coding RNA 2537 ncRNA chr12-2325 chr12 931190 931400 + 9.90 0.000 non-coding (NR_123713, exon 4 of 14) non-coding (NR_123713, exon 4 of 14) 1781 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chrX-2474 chrX 86248742 86248952 + 9.90 0.000 intron (NM_001139514, intron 1 of 11) L1PA15|LINE|L1 -14121 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr6-5912 chr6 53314380 53314590 + 9.90 0.000 intron (NM_001242830, intron 1 of 6) intron (NM_001242830, intron 1 of 6) 23132 NR_046241 647190 Hs.520189 NR_046241 RPS16P5 RPS16_3_702 ribosomal protein S16 pseudogene 5 pseudo chr11-6713 chr11 79576581 79576791 + 9.90 0.000 Intergenic Intergenic -135656 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr11-6075 chr11 33100603 33100813 + 9.90 0.000 intron (NM_001326, intron 10 of 20) L2b|LINE|L2 24558 NR_015451 283267 Hs.533701 NR_015451 ENSG00000280798 LINC00294 NCRNA00294 long intergenic non-protein coding RNA 294 ncRNA chr20-3080 chr20 16415129 16415339 + 9.90 0.000 intron (NM_001199866, intron 15 of 22) intron (NM_001199866, intron 15 of 22) 158214 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr17-6001 chr17 77848547 77848757 + 9.90 0.000 Intergenic L1ME3A|LINE|L1 35435 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr8-4522 chr8 122677991 122678201 + 9.90 0.000 intron (NR_126348, intron 2 of 3) intron (NR_126348, intron 2 of 3) 16010 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr15-2092 chr15 66473396 66473606 + 9.90 0.000 intron (NM_002755, intron 5 of 10) AluJo|SINE|Alu 23533 NR_039737 100616149 NR_039737 ENSG00000266589 MIR4512 - microRNA 4512 ncRNA chr11-6868 chr11 101560944 101561154 + 9.90 0.000 intron (NM_004621, intron 1 of 12) intron (NM_004621, intron 1 of 12) 22958 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr1-4750 chr1 8077290 8077500 + 9.90 0.000 Intergenic Intergenic -51086 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr11-4645 chr11 33952352 33952562 + 9.90 0.000 Intergenic AluSx|SINE|Alu -60381 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr17-7564 chr17 19728265 19728475 + 9.90 0.000 Intergenic Intergenic -9391 NR_135624 146802 Hs.126830 NM_152908 ENSG00000180638 SLC47A2 MATE2|MATE2-B|MATE2-K|MATE2K solute carrier family 47 member 2 protein-coding chr4-2246 chr4 156673638 156673848 + 9.90 0.000 Intergenic Intergenic 298056 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr7-4038 chr7 157688330 157688540 + 9.90 0.000 intron (NM_130843, intron 11 of 21) intron (NM_130843, intron 11 of 21) -114013 NR_029689 406945 NR_029689 ENSG00000207960 MIR153-2 MIRN153-2|mir-153-2 microRNA 153-2 ncRNA chrX-1854 chrX 111888668 111888878 + 9.90 0.000 intron (NM_001195577, intron 1 of 3) L2a|LINE|L2 6876 NM_001195577 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr4-6645 chr4 1984349 1984559 + 9.90 0.000 intron (NM_005663, intron 8 of 10) intron (NM_005663, intron 8 of 10) 2023 NR_030641 100126332 NR_030641 ENSG00000284587 MIR943 MIRN943|hsa-mir-943 microRNA 943 ncRNA chr17-5666 chr17 50279014 50279224 + 9.90 0.000 intron (NM_001168215, intron 5 of 5) intron (NM_001168215, intron 5 of 5) 4653 NM_153229 162461 Hs.224630 NM_153229 ENSG00000167105 TMEM92 - transmembrane protein 92 protein-coding chr5-8450 chr5 129600923 129601133 + 9.90 0.000 intron (NM_133638, intron 8 of 22) AluSx3|SINE|Alu -140339 NR_125748 103689846 Hs.628635 NR_125748 ENSG00000249421 ADAMTS19-AS1 - ADAMTS19 antisense RNA 1 ncRNA chr1-4742 chr1 6450098 6450308 + 9.90 0.000 intron (NM_031475, intron 8 of 12) intron (NM_031475, intron 8 of 12) 15992 NM_148965 8718 Hs.462529 NM_003790 ENSG00000215788 TNFRSF25 APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR TNF receptor superfamily member 25 protein-coding chr1-10812 chr1 202974938 202975148 + 9.90 0.000 Intergenic LTR40a|LTR|ERVL -7786 NM_016243 51706 Hs.334832 NM_016243 ENSG00000159348 CYB5R1 B5R.1|B5R1|B5R2|NQO3A2|humb5R2 cytochrome b5 reductase 1 protein-coding chr15-523 chr15 43005127 43005337 + 9.90 0.000 intron (NM_174916, intron 30 of 46) SVA_B|Retroposon|SVA -84454 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr10-3434 chr10 43110649 43110859 + 9.90 0.000 intron (NM_020630, intron 6 of 18) intron (NM_020630, intron 6 of 18) 6022 NM_001355216 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr3-11225 chr3 195146295 195146505 + 9.90 0.000 intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) -1471 NR_102711 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr7-4820 chr7 99752626 99752836 + 9.90 0.000 Intergenic Intergenic -17535 NM_001256497 100861540 NM_001256497 ENSG00000282301 CYP3A7-CYP3A51P CYP3A7|CYP3A7-3AP1|CYP3A7-CYP3AP1|CYP3A7.1L|CYPIIIA7 CYP3A7-CYP3A51P readthrough protein-coding chr7-8089 chr7 25292920 25293130 + 9.90 0.000 Intergenic Intergenic -64539 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr2-9101 chr2 205253655 205253865 + 9.90 0.000 intron (NM_057177, intron 16 of 21) L2c|LINE|L2 -428740 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr19-3368 chr19 11549880 11550090 + 9.90 0.000 3' UTR (NM_001299, exon 7 of 7) 3' UTR (NM_001299, exon 7 of 7) 5482 NM_001363673 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding chrX-1359 chrX 147422695 147422905 + 9.90 0.000 Intergenic LTR16C|LTR|ERVL -138072 NR_030240 574518 NR_030240 ENSG00000207867 MIR514A3 MIR514-3|MIRN514-3|hsa-mir-514a-3 microRNA 514a-3 ncRNA chr11-2862 chr11 12484380 12484590 + 9.90 0.000 intron (NM_018222, intron 4 of 12) intron (NM_018222, intron 4 of 12) 106914 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr8-3677 chr8 16779865 16780075 + 9.90 0.000 Intergenic Intergenic 222375 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr14-2139 chr14 78969437 78969647 + 9.90 0.000 intron (NR_073547, intron 13 of 20) intron (NR_073547, intron 13 of 20) -230440 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr1-15924 chr1 186320726 186320936 + 9.90 0.000 intron (NM_003292, intron 45 of 50) intron (NM_003292, intron 45 of 50) 24558 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr1-9351 chr1 28848377 28848587 + 9.90 0.000 intron (NM_000911, intron 1 of 2) L2c|LINE|L2 36312 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chr15-4852 chr15 74817440 74817650 + 9.90 0.000 intron (NM_021819, intron 4 of 13) intron (NM_021819, intron 4 of 13) 4710 NM_021819 79748 Hs.620644 NM_021819 ENSG00000140506 LMAN1L ERGIC-53L|ERGL lectin, mannose binding 1 like protein-coding chr19-2218 chr19 41870403 41870613 + 9.90 0.000 TTS (NR_106855) TTS (NR_106855) 881 NR_106855 102465478 NR_106855 ENSG00000276926 MIR6797 hsa-mir-6797 microRNA 6797 ncRNA chr17-2794 chr17 6470257 6470467 + 9.90 0.000 exon (NM_001165966, exon 12 of 19) exon (NM_001165966, exon 12 of 19) 25907 NM_001195228 54478 Hs.592116 NM_019013 ENSG00000129195 PIMREG CATS|FAM64A|RCS1 PICALM interacting mitotic regulator protein-coding chr5-3683 chr5 177606459 177606669 + 9.90 0.000 intron (NM_007255, intron 2 of 5) L2a|LINE|L2 6432 NM_007255 11285 Hs.455109 NM_007255 ENSG00000027847 B4GALT7 EDSP1|EDSSLA|EDSSPD1|XGALT1|XGPT|XGPT1 beta-1,4-galactosyltransferase 7 protein-coding chr22-1561 chr22 38451766 38451976 + 9.90 0.000 intron (NM_152868, intron 1 of 1) MIR3|SINE|MIR 3328 NM_152868 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr19-2641 chr19 5825322 5825532 + 9.90 0.000 intron (NM_004558, intron 1 of 1) intron (NM_004558, intron 1 of 1) 1625 NM_004558 4902 Hs.234775 NM_004558 ENSG00000171119 NRTN NTN neurturin protein-coding chr21-491 chr21 14867025 14867235 + 9.90 0.000 intron (NR_146322, intron 1 of 3) intron (NR_146322, intron 1 of 3) 51538 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr13-3086 chr13 47110785 47110995 + 9.90 0.000 Intergenic HERV1_I-int|LTR|ERV1 -213814 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr14-1560 chr14 69716075 69716285 + 9.90 0.000 Intergenic Intergenic -50962 NM_001039465 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr17-2423 chr17 82376246 82376456 + 9.90 0.000 TTS (NM_018949) TTS (NM_018949) 2074 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr1-6657 chr1 47191584 47191794 + 9.90 0.000 Intergenic Intergenic -1653 NM_005764 10158 Hs.431099 NM_005764 ENSG00000162366 PDZK1IP1 DD96|MAP17|SPAP PDZK1 interacting protein 1 protein-coding chr7-6509 chr7 22328494 22328704 + 9.90 0.000 intron (NM_012294, intron 1 of 25) (ATAC)n|Simple_repeat|Simple_repeat 28555 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr1-10566 chr1 174065777 174065987 + 9.90 0.000 Intergenic L1MA3|LINE|L1 -72810 NM_172071 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding chr7-2622 chr7 1058642 1058852 + 9.90 0.000 3' UTR (NM_138445, exon 2 of 2) 3' UTR (NM_138445, exon 2 of 2) 3377 NM_001303474 115330 Hs.585007 NM_138445 ENSG00000164849 GPR146 PGR8 G protein-coupled receptor 146 protein-coding chr14-2726 chr14 94933828 94934038 + 9.90 0.000 Intergenic Intergenic 163291 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr11-3526 chr11 8199801 8200011 + 9.90 0.000 Intergenic Intergenic -30881 NM_001346694 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr18-1311 chr18 70936124 70936334 + 9.90 0.000 Intergenic MER1A|DNA|hAT-Charlie -285275 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chrX-767 chrX 30378638 30378848 + 9.90 0.000 Intergenic THE1C|LTR|ERVL-MaLR -69353 NM_000475 190 Hs.268490 NM_000475 ENSG00000169297 NR0B1 AHC|AHCH|AHX|DAX-1|DAX1|DSS|GTD|HHG|NROB1|SRXY2 nuclear receptor subfamily 0 group B member 1 protein-coding chr17-4634 chr17 12180862 12181072 + 9.90 0.000 Intergenic MIR3|SINE|MIR 99068 NR_030613 100126313 NR_030613 ENSG00000266297 MIR744 MIRN744|hsa-mir-744|mir-744 microRNA 744 ncRNA chr2-5491 chr2 137252859 137253069 + 9.90 0.000 intron (NM_001316349, intron 10 of 27) intron (NM_001316349, intron 10 of 27) 487419 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr8-3528 chr8 119070593 119070803 + 9.90 0.000 intron (NM_006438, intron 1 of 5) intron (NM_006438, intron 1 of 5) -1916 NR_134297 101927513 Hs.676598 NR_134297 ENSG00000254278 LOC101927513 - uncharacterized LOC101927513 ncRNA chr15-2999 chr15 54644775 54644985 + 9.90 0.000 Intergenic L1M1|LINE|L1 -411867 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr17-3953 chr17 62656979 62657189 + 9.90 0.000 intron (NM_006039, intron 1 of 29) MLT1K|LTR|ERVL-MaLR 29414 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr14-3359 chr14 91306452 91306662 + 9.90 0.000 intron (NM_001080414, intron 18 of 29) MIRc|SINE|MIR -52677 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr3-6316 chr3 77357474 77357684 + 9.90 0.000 intron (NM_001290039, intron 2 of 26) MIRb|SINE|MIR 259567 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr1-16549 chr1 233610495 233610705 + 9.90 0.000 Intergenic Intergenic -3506 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr17-3828 chr17 42578439 42578649 + 9.90 0.000 promoter-TSS (NM_001256016) promoter-TSS (NM_001256016) -713 NR_045669 29893 Hs.383019 NM_013290 ENSG00000131470 PSMC3IP GT198|HOP2|HUMGT198A|ODG3|TBPIP PSMC3 interacting protein protein-coding chr5-4851 chr5 63375781 63375991 + 9.90 0.000 Intergenic L1PA7|LINE|L1 586406 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr12-1512 chr12 57093965 57094175 + 9.90 0.000 intron (NM_005967, intron 6 of 6) intron (NM_005967, intron 6 of 6) 4956 NM_005967 4665 Hs.159223 NM_005967 ENSG00000166886 NAB2 MADER NGFI-A binding protein 2 protein-coding chr15-2714 chr15 90329700 90329910 + 9.90 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger 19642 NR_028287 23766 Hs.592014 NR_028287 GABARAPL3 ATG8D GABA type A receptor associated protein like 3 pseudogene pseudo chr13-4398 chr13 109667174 109667384 + 9.90 0.000 Intergenic Intergenic -60995 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr8-2856 chr8 133660858 133661068 + 9.90 0.000 Intergenic MIR3|SINE|MIR 23103 NR_134462 105375773 Hs.445172 NR_134462 LOC105375773 - uncharacterized LOC105375773 ncRNA chr1-2912 chr1 20633759 20633969 + 9.90 0.000 TTS (NR_106732) TTS (NR_106732) 185 NR_106732 102464833 NR_106732 ENSG00000284005 MIR6084 hsa-mir-6084 microRNA 6084 ncRNA chr7-8484 chr7 50504734 50504944 + 9.90 0.000 intron (NM_001242889, intron 4 of 12) intron (NM_001242889, intron 4 of 12) -26920 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr4-7949 chr4 110106965 110107175 + 9.90 0.000 intron (NM_001130721, intron 2 of 4) intron (NM_001130721, intron 2 of 4) 91545 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr3-7284 chr3 1312557 1312767 + 9.90 0.000 intron (NM_001349359, intron 6 of 20) intron (NM_001349359, intron 6 of 20) 219638 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr4-3944 chr4 169846527 169846737 + 9.90 0.000 Intergenic Intergenic -88688 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr15-1962 chr15 38556209 38556419 + 9.90 0.000 intron (NM_001306086, intron 2 of 14) intron (NM_001306086, intron 2 of 14) 8500 NM_001306086 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr18-1935 chr18 35131115 35131325 + 9.90 0.000 intron (NM_001143827, intron 6 of 7) intron (NM_001143827, intron 6 of 7) 89807 NR_046177 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr2-5398 chr2 106542893 106543103 + 9.90 0.000 intron (NM_001368307, intron 5 of 5) intron (NM_001368307, intron 5 of 5) 55634 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr19-3526 chr19 42296268 42296478 + 9.90 0.000 TTS (NM_015125) TTS (NM_015125) -5759 NM_199285 284338 Hs.585901 NM_199285 ENSG00000188368 PRR19 - proline rich 19 protein-coding chr3-9077 chr3 27312235 27312445 + 9.90 0.000 intron (NM_152534, intron 8 of 38) intron (NM_152534, intron 8 of 38) 57043 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr15-2640 chr15 71131844 71132054 + 9.90 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -9500 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr15-1822 chr15 40162363 40162573 + 9.90 0.000 intron (NM_001211, intron 1 of 22) L2a|LINE|L2 1459 NM_001211 701 Hs.513645 NM_001211 ENSG00000156970 BUB1B BUB1beta|BUBR1|Bub1A|MAD3L|MVA1|SSK1|hBUBR1 BUB1 mitotic checkpoint serine/threonine kinase B protein-coding chr7-7188 chr7 9533866 9534076 + 9.90 0.000 Intergenic L1PA16|LINE|L1 -100299 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr8-4481 chr8 118029595 118029805 + 9.90 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 82119 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr10-3246 chr10 120071287 120071497 + 9.90 0.000 Intergenic Intergenic 112879 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr11-7087 chr11 122093844 122094054 + 9.90 0.000 intron (NR_137184, intron 1 of 1) intron (NR_137184, intron 1 of 1) 5895 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr16-1194 chr16 11965005 11965215 + 9.90 0.000 promoter-TSS (NM_001192) promoter-TSS (NM_001192) -100 NM_001192 608 Hs.2556 NM_001192 ENSG00000048462 TNFRSF17 BCM|BCMA|CD269|TNFRSF13A TNF receptor superfamily member 17 protein-coding chrX-2879 chrX 146906216 146906426 + 9.90 0.000 Intergenic MER52A|LTR|ERV1 -91577 NM_001244892 100133053 NM_001244892 ENSG00000235699 CXorf51B CXorf51A chromosome X open reading frame 51B protein-coding chr17-3659 chr17 8087645 8087855 + 9.90 0.000 promoter-TSS (NR_036201) promoter-TSS (NR_036201) -34 NM_001139 242 Hs.136574 NM_001139 ENSG00000179477 ALOX12B 12R-LOX|ARCI2 arachidonate 12-lipoxygenase, 12R type protein-coding chr2-6488 chr2 173078396 173078606 + 9.90 0.000 intron (NM_133646, intron 1 of 11) intron (NM_133646, intron 1 of 11) 2655 NM_016653 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr12-2396 chr12 32991505 32991715 + 9.90 0.000 Intergenic Intergenic -94764 NM_001005242 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr11-4477 chr11 108115794 108116004 + 9.90 0.000 Intergenic MER51E|LTR|ERV1 -5668 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr5-7968 chr5 82364618 82364828 + 9.90 0.000 Intergenic Intergenic 85261 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr5-1440 chr5 31988396 31988606 + 9.90 0.000 intron (NM_178140, intron 3 of 24) MER21C|LTR|ERVL -52342 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr12-3303 chr12 77546659 77546869 + 9.90 0.000 Intergenic MER21C|LTR|ERVL -284130 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr16-6027 chr16 9232418 9232628 + 9.90 0.000 Intergenic Intergenic -123065 NR_135195 101927009 Hs.537273 NR_135195 ENSG00000261617 LINC02177 - long intergenic non-protein coding RNA 2177 ncRNA chr3-5692 chr3 13888724 13888934 + 9.90 0.000 Intergenic L3|LINE|CR1 -8758 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding chr3-4003 chr3 58796633 58796843 + 9.90 0.000 intron (NM_001351532, intron 14 of 14) Tigger1|DNA|TcMar-Tigger -27733 NR_110820 101929238 Hs.683953 NR_110820 ENSG00000242428 C3orf67-AS1 - C3orf67 antisense RNA 1 ncRNA chr14-2558 chr14 31083374 31083584 + 9.90 0.000 intron (NM_007077, intron 5 of 5) intron (NM_007077, intron 5 of 5) 56836 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 subunit sigma 1 protein-coding chr17-4540 chr17 77895823 77896033 + 9.90 0.000 Intergenic AluSz6|SINE|Alu -11841 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr17-5471 chr17 40511900 40512110 + 9.90 0.000 Intergenic Intergenic -10382 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr19-3957 chr19 377916 378126 + 9.90 0.000 Intergenic Intergenic -1995 NM_199202 51298 Hs.250002 NM_016585 ENSG00000105549 THEG CT56|THEG1 theg spermatid protein protein-coding chr1-10826 chr1 203609412 203609622 + 9.90 0.000 Intergenic Intergenic -17270 NM_001001396 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr10-1532 chr10 77586994 77587204 + 9.90 0.000 intron (NM_001271519, intron 1 of 28) 5S|rRNA|rRNA 50709 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr6-8289 chr6 142884573 142884783 + 9.90 0.000 intron (NM_006734, intron 1 of 9) GA-rich|Low_complexity|Low_complexity 60498 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr19-3476 chr19 35723029 35723239 + 9.90 0.000 exon (NM_014727, exon 6 of 37) exon (NM_014727, exon 6 of 37) 5115 NM_014727 9757 Hs.92236 NM_014727 ENSG00000272333 KMT2B CXXC10|DYT28|HRX2|MLL1B|MLL2|MLL4|TRX2|WBP-7|WBP7 lysine methyltransferase 2B protein-coding chr7-3339 chr7 74454582 74454792 + 9.90 0.000 intron (NM_016328, intron 1 of 26) intron (NM_016328, intron 1 of 26) 781 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr6-8387 chr6 150136207 150136417 + 9.90 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -6732 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr13-2112 chr13 89451367 89451577 + 9.90 0.000 Intergenic Intergenic 49037 NR_131228 105370308 Hs.599406 NR_131228 ENSG00000226037 LINC01040 TCONS_00021682 long intergenic non-protein coding RNA 1040 ncRNA chr6-3620 chr6 111936536 111936746 + 9.90 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -27244 NR_149099 105377946 NR_149099 LINC02527 - long intergenic non-protein coding RNA 2527 ncRNA chr2-7570 chr2 24822387 24822597 + 9.90 0.000 TTS (NR_136184) TTS (NR_136184) 29067 NR_136183 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr11-6900 chr11 105907649 105907859 + 9.90 0.000 intron (NR_046356, intron 8 of 16) MIRb|SINE|MIR 114486 NM_032424 84437 Hs.266782 NM_032424 ENSG00000170903 MSANTD4 KIAA1826 Myb/SANT DNA binding domain containing 4 with coiled-coils protein-coding chr7-1552 chr7 16658059 16658269 + 9.90 0.000 intron (NM_001362718, intron 1 of 10) intron (NM_001362718, intron 1 of 10) -3050 NM_001362717 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr9-4311 chr9 123761696 123761906 + 9.90 0.000 intron (NM_001352968, intron 3 of 18) intron (NM_001352968, intron 3 of 18) 168325 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr19-3383 chr19 13194777 13194987 + 9.90 0.000 Intergenic AluSz|SINE|Alu 44471 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr22-2855 chr22 44778437 44778647 + 9.90 0.000 intron (NM_181335, intron 1 of 11) L1PB1|LINE|L1 25984 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr13-2314 chr13 32352962 32353172 + 9.90 0.000 intron (NM_000059, intron 13 of 26) L2a|LINE|L2 37587 NM_000059 675 Hs.34012 NM_000059 ENSG00000139618 BRCA2 BRCC2|BROVCA2|FACD|FAD|FAD1|FANCD|FANCD1|GLM3|PNCA2|XRCC11 BRCA2 DNA repair associated protein-coding chr2-7988 chr2 66045588 66045798 + 9.90 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 312635 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr2-7240 chr2 225018101 225018311 + 9.90 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) -7666 NR_039641 100616207 NR_039641 ENSG00000263828 MIR4439 - microRNA 4439 ncRNA chr2-12685 chr2 75906351 75906561 + 9.90 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -195541 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr13-2758 chr13 98673145 98673355 + 9.90 0.000 Intergenic Intergenic 79422 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr21-1280 chr21 33866922 33867132 + 9.90 0.000 intron (NM_001331010, intron 31 of 38) intron (NM_001331010, intron 31 of 38) 48777 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr5-5055 chr5 91843086 91843296 + 9.90 0.000 Intergenic Intergenic -459874 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr3-6809 chr3 145702528 145702738 + 9.90 0.000 Intergenic MER70-int|LTR|ERVL 366552 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr16-2624 chr16 3249416 3249626 + 9.90 0.000 exon (NM_000243, exon 3 of 10) exon (NM_000243, exon 3 of 10) 7106 NM_001198536 4210 Hs.632221 NM_000243 ENSG00000103313 MEFV FMF|MEF|TRIM20 MEFV innate immuity regulator, pyrin protein-coding chr2-8220 chr2 96098126 96098336 + 9.90 0.000 Intergenic MIR3|SINE|MIR 18340 NM_000682 151 Hs.247686 NM_000682 ENSG00000274286 ADRA2B ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR adrenoceptor alpha 2B protein-coding chr21-679 chr21 14826629 14826839 + 9.90 0.000 intron (NR_146322, intron 2 of 3) L2c|LINE|L2 91934 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr10-2434 chr10 3330593 3330803 + 9.90 0.000 intron (NR_131187, intron 1 of 1) Plat_L3|LINE|CR1 12003 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr11-4308 chr11 68388539 68388749 + 9.90 0.000 intron (NM_001291902, intron 6 of 22) L3|LINE|CR1 -72108 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr13-1784 chr13 19373663 19373873 + 9.90 0.000 Intergenic Intergenic 28719 NR_034026 100287114 Hs.375063 NR_034026 ENSG00000236834 LINC00421 - long intergenic non-protein coding RNA 421 ncRNA chr21-739 chr21 39071657 39071867 + 9.90 0.000 Intergenic Intergenic -93988 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr2-2317 chr2 108573186 108573396 + 9.90 0.000 intron (NM_001193483, intron 1 of 9) intron (NM_001193483, intron 1 of 9) -15015 NM_004987 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr14-2774 chr14 19487349 19487559 + 9.90 0.000 Intergenic Intergenic -53113 NR_027480 404785 Hs.711826 NM_207513 ENSG00000187537 POTEG A26C2|ACTBL1|CT104.4|POTE-14|POTE14|POTE14alpha|POTE22 POTE ankyrin domain family member G protein-coding GL000009.2-2 GL000009.2 191543 191753 + 9.90 0.000 NA NA NA NA chr18-682 chr18 73646467 73646677 + 9.90 0.000 Intergenic Intergenic 321631 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr20-2284 chr20 4607423 4607633 + 9.90 0.000 Intergenic Intergenic -78928 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chrX-2368 chrX 68498426 68498636 + 9.90 0.000 promoter-TSS (NM_173834) promoter-TSS (NM_173834) -251 NM_001195214 286451 Hs.82719 NM_173834 ENSG00000181704 YIPF6 FinGER6 Yip1 domain family member 6 protein-coding chr7-2727 chr7 38759948 38760158 + 9.90 0.000 intron (NM_014396, intron 17 of 28) intron (NM_014396, intron 17 of 28) -72964 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chr2-7255 chr2 230925680 230925890 + 9.90 0.000 promoter-TSS (NM_005683) promoter-TSS (NM_005683) -543 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr3-7934 chr3 152506804 152507014 + 9.90 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -165919 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr4-4345 chr4 37932100 37932310 + 9.90 0.000 intron (NM_001253912, intron 2 of 20) intron (NM_001253912, intron 2 of 20) -28193 NM_006607 10744 Hs.668806 NM_006607 ENSG00000250254 PTTG2 - pituitary tumor-transforming 2 protein-coding chr16-3154 chr16 75486123 75486333 + 9.90 0.000 intron (NR_163481, intron 1 of 2) intron (NR_163481, intron 1 of 2) 9213 NM_021615 4166 Hs.655622 NM_021615 ENSG00000183196 CHST6 C-GlcNAc6ST|GST4-beta|MCDC1|glcNAc6ST-5|gn6st-5|hCGn6ST carbohydrate sulfotransferase 6 protein-coding chr8-3468 chr8 97555933 97556143 + 9.90 0.000 Intergenic Intergenic -88146 NM_001363137 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr4-3483 chr4 133130330 133130540 + 9.90 0.000 intron (NR_125885, intron 7 of 8) HAL1|LINE|L1 18681 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA chr11-5527 chr11 89182855 89183065 + 9.90 0.000 intron (NM_000372, intron 1 of 4) intron (NM_000372, intron 1 of 4) 5085 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr1-14936 chr1 86054624 86054834 + 9.90 0.000 intron (NM_152890, intron 10 of 59) L1PA17|LINE|L1 101742 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr20-2138 chr20 36365704 36365914 + 9.90 0.000 intron (NM_001365621, intron 1 of 12) intron (NM_001365621, intron 1 of 12) 59470 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr15-3532 chr15 100836650 100836860 + 9.90 0.000 Intergenic Intergenic -12997 NR_160704 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA chr7-5717 chr7 70690058 70690268 + 9.90 0.000 intron (NM_015570, intron 5 of 18) MIR|SINE|MIR -441981 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr6-2167 chr6 23175061 23175271 + 9.90 0.000 Intergenic Intergenic -457242 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr18-883 chr18 46412385 46412595 + 9.90 0.000 intron (NM_001256758, intron 1 of 5) intron (NM_001256758, intron 1 of 5) 78266 NR_046357 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr20-3789 chr20 22345985 22346195 + 9.90 0.000 Intergenic Intergenic -63289 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chr22-2799 chr22 42702904 42703114 + 9.90 0.000 intron (NM_001318038, intron 1 of 2) intron (NM_001318038, intron 1 of 2) 17861 NR_146459 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr12-2562 chr12 110055564 110055774 + 9.90 0.000 intron (NM_207435, intron 4 of 4) LTR8|LTR|ERV1 -7022 NR_148517 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr4-6555 chr4 182301867 182302077 + 9.90 0.000 intron (NM_001080477, intron 1 of 27) intron (NM_001080477, intron 1 of 27) 58570 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chrX-1635 chrX 123859413 123859623 + 9.90 0.000 promoter-TSS (NM_001204401) promoter-TSS (NM_001204401) -294 NM_001204401 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr21-1036 chr21 25255952 25256162 + 9.90 0.000 Intergenic MamGypLTR2c|LTR|Gypsy 175644 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA chr9-7288 chr9 8581182 8581392 + 9.90 0.000 intron (NM_130392, intron 3 of 30) L1M5|LINE|L1 152659 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr5-2119 chr5 71900166 71900376 + 9.90 0.000 Intergenic HERVL-int|LTR|ERVL 180996 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr14-1838 chr14 60905545 60905755 + 9.90 0.000 intron (NM_001177963, intron 6 of 6) MLT2B3|LTR|ERVL 75429 NM_020810 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr8-6621 chr8 76616843 76617053 + 9.90 0.000 intron (NR_024360, intron 2 of 3) intron (NR_024360, intron 2 of 3) -64299 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr17-2197 chr17 76716942 76717152 + 9.90 0.000 intron (NM_001081461, intron 6 of 6) intron (NM_001081461, intron 6 of 6) -6082 NM_001008529 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr18-1444 chr18 33496642 33496852 + 9.90 0.000 Intergenic Intergenic -55707 NM_001371120 chr1-10955 chr1 212700435 212700645 + 9.90 0.000 promoter-TSS (NM_018664) promoter-TSS (NM_018664) -700 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr4-5420 chr4 8688513 8688723 + 9.90 0.000 Intergenic Intergenic 95853 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr2-4771 chr2 27200376 27200586 + 9.90 0.000 exon (NM_021095, exon 17 of 17) exon (NM_021095, exon 17 of 17) -11550 NM_080592 51374 Hs.9527 NM_016085 ENSG00000138085 ATRAID APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18 all-trans retinoic acid induced differentiation factor protein-coding chr20-961 chr20 36856540 36856750 + 9.90 0.000 intron (NM_080627, intron 1 of 14) intron (NM_080627, intron 1 of 14) 3228 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr1-15777 chr1 175132611 175132821 + 9.90 0.000 intron (NM_022093, intron 15 of 18) intron (NM_022093, intron 15 of 18) 60060 NM_001162895 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr1-4842 chr1 26877964 26878174 + 9.90 0.000 3' UTR (NM_018066, exon 5 of 5) 3' UTR (NM_018066, exon 5 of 5) 12214 NM_018066 54707 Hs.14333 NM_018066 ENSG00000142751 GPN2 ATPBD1B GPN-loop GTPase 2 protein-coding chr1-12148 chr1 176577974 176578184 + 9.90 0.000 intron (NM_021936, intron 2 of 4) intron (NM_021936, intron 2 of 4) 114904 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr7-5635 chr7 54649783 54649993 + 9.90 0.000 Intergenic Intergenic 92918 NR_038994 285878 Hs.335933 NR_038994 ENSG00000224223 VSTM2A-OT1 GS1-18A18.1 VSTM2A overlapping transcript 1 ncRNA chr2-9125 chr2 207684028 207684238 + 9.90 0.000 Intergenic Intergenic 21703 NR_135567 102724714 Hs.443475 NR_135566 ENSG00000224137 LINC01857 - long intergenic non-protein coding RNA 1857 ncRNA chr7-3804 chr7 93534160 93534370 + 9.90 0.000 intron (NM_001164737, intron 2 of 15) MIRb|SINE|MIR 25545 NM_001164738 799 Hs.489127 NM_001742 ENSG00000004948 CALCR CRT|CT-R|CTR|CTR1 calcitonin receptor protein-coding chr12-4583 chr12 31000911 31001121 + 9.90 0.000 Intergenic L2b|LINE|L2 72831 NR_038927 100506660 Hs.586774 NR_038927 ENSG00000245614 DDX11-AS1 CONCR|SCAT4 DDX11 antisense RNA 1 ncRNA chr2-6467 chr2 163505313 163505523 + 9.90 0.000 Intergenic L1MA3|LINE|L1 230590 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr6-4592 chr6 43817250 43817460 + 9.90 0.000 Intergenic Intergenic 34978 NR_149142 285857 Hs.582798 NR_149142 ENSG00000283215 LINC02537 - long intergenic non-protein coding RNA 2537 ncRNA chr8-5464 chr8 42620777 42620987 + 9.90 0.000 Intergenic Intergenic -76484 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr11-2548 chr11 87432187 87432397 + 9.90 0.000 Intergenic Intergenic 287119 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr14-2989 chr14 51792920 51793130 + 9.90 0.000 Intergenic L1MB3|LINE|L1 -67587 NM_001243773 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr10-2180 chr10 753456 753666 + 9.90 0.000 Intergenic L1MB3|LINE|L1 -63893 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr1-3485 chr1 66533966 66534176 + 9.90 0.000 promoter-TSS (NM_001350217) promoter-TSS (NM_001350217) -82 NM_032291 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr1-9593 chr1 44464538 44464748 + 9.90 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 40642 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr15-2529 chr15 41984846 41985056 + 9.90 0.000 intron (NM_001206670, intron 18 of 19) intron (NM_001206670, intron 18 of 19) 12188 NR_120334 101928388 Hs.738043 NR_120334 ENSG00000246740 PLA2G4E-AS1 - PLA2G4E antisense RNA 1 ncRNA chr8-3918 chr8 41846225 41846435 + 9.90 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) -48708 NM_020476 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr4-1946 chr4 112928818 112929028 + 9.90 0.000 intron (NM_001354275, intron 2 of 43) AluSx|SINE|Alu 67936 NM_001354261 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr16-2046 chr16 64629676 64629886 + 9.90 0.000 Intergenic Intergenic 492282 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr12-3943 chr12 3629393 3629603 + 9.90 0.000 intron (NM_001144958, intron 15 of 19) intron (NM_001144958, intron 15 of 19) 123611 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr22-2924 chr22 46800300 46800510 + 9.90 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 26478 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr5-3495 chr5 173355710 173355920 + 9.90 0.000 Intergenic Intergenic 8360 NR_107023 102465862 NR_107023 ENSG00000274994 MIR8056 hsa-mir-8056 microRNA 8056 ncRNA chr7-9711 chr7 155797115 155797325 + 9.90 0.000 Intergenic (CCCCCAG)n|Simple_repeat|Simple_repeat 11852 NR_132318 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr7-2192 chr7 95608799 95609009 + 9.90 0.000 Intergenic Intergenic -12388 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase 4 protein-coding chr5-8423 chr5 127705347 127705557 + 9.90 0.000 intron (NM_001317938, intron 1 of 6) intron (NM_001317938, intron 1 of 6) 2063 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr3-6872 chr3 152043758 152043968 + 9.90 0.000 Intergenic Intergenic -115688 NR_110202 101928142 Hs.680207 NR_110202 AADACL2-AS1 - AADACL2 antisense RNA 1 ncRNA chr9-7985 chr9 93206829 93207039 + 9.90 0.000 intron (NM_006648, intron 1 of 28) intron (NM_006648, intron 1 of 28) 22004 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr1-4318 chr1 41495487 41495697 + 9.90 0.000 Intergenic Intergenic -10909 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr9-2875 chr9 130239425 130239635 + 9.90 0.000 Intergenic Intergenic -1857 NR_162140 113219459 NR_162140 MIR12126 - microRNA 12126 ncRNA chr20-1338 chr20 3461421 3461631 + 9.90 0.000 Intergenic LTR16B|LTR|ERVL -9492 NM_001207047 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr7-1983 chr7 1347917 1348127 + 9.90 0.000 Intergenic Intergenic 111448 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr11-6141 chr11 41223707 41223917 + 9.90 0.000 intron (NM_001258419, intron 1 of 6) intron (NM_001258419, intron 1 of 6) 235824 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr5-5329 chr5 129002725 129002935 + 9.90 0.000 intron (NM_001017372, intron 4 of 9) MIR|SINE|MIR 37342 NM_001017372 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr5-9009 chr5 165403431 165403641 + 9.90 0.000 Intergenic AluJb|SINE|Alu 933257 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr1-10081 chr1 94273174 94273384 + 9.90 0.000 Intergenic Intergenic -25533 NM_001328665 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr2-5909 chr2 9227010 9227220 + 9.90 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 20303 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr21-1017 chr21 19993342 19993552 + 9.90 0.000 Intergenic Tigger17b|DNA|TcMar-Tigger -93692 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr3-6491 chr3 111999867 112000077 + 9.90 0.000 intron (NM_001008272, intron 2 of 4) intron (NM_001008272, intron 2 of 4) 812 NM_001008273 29114 Hs.169330 NM_013259 ENSG00000144834 TAGLN3 NP22|NP24|NP25 transgelin 3 protein-coding chr11-6181 chr11 45217497 45217707 + 9.90 0.000 intron (NM_001256695, intron 5 of 7) intron (NM_001256695, intron 5 of 7) 68739 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr6-5017 chr6 110298934 110299144 + 9.90 0.000 exon (NM_001354595, exon 3 of 4) exon (NM_001354595, exon 3 of 4) 31019 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr12-3711 chr12 6807566 6807776 + 9.90 0.000 intron (NM_000616, intron 3 of 9) L1MD1|LINE|L1 -14150 NM_019858 27239 Hs.631654 NM_014449 ENSG00000250510 GPR162 A-2|GRCA G protein-coupled receptor 162 protein-coding chr15-2907 chr15 43308988 43309198 + 9.90 0.000 Intergenic L2a|LINE|L2 -6838 NM_052955 116179 Hs.164661 NM_052955 ENSG00000159495 TGM7 TGMZ transglutaminase 7 protein-coding chr7-6264 chr7 135303464 135303674 + 9.90 0.000 Intergenic Intergenic 71590 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr17-4757 chr17 43043411 43043621 + 9.90 0.000 TTS (NM_007300) TTS (NM_007300) 18285 NM_005440 8153 Hs.603111 NM_005440 ENSG00000108830 RND2 ARHN|RHO7|RhoN Rho family GTPase 2 protein-coding chr7-9029 chr7 101554772 101554982 + 9.90 0.000 intron (NM_133457, intron 11 of 12) intron (NM_133457, intron 11 of 12) 14129 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr2-12181 chr2 40662512 40662722 + 9.90 0.000 Intergenic L2a|LINE|L2 -150182 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr14-4213 chr14 96000133 96000343 + 9.90 0.000 Intergenic Intergenic -39086 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr11-9064 chr11 29797010 29797220 + 9.90 0.000 Intergenic L1PA3|LINE|L1 178313 NR_149106 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr5-3622 chr5 134593078 134593288 + 9.90 0.000 Intergenic Intergenic 39645 NM_001033503 51128 Hs.432984 NM_016103 ENSG00000152700 SAR1B ANDD|CMRD|GTBPB|SARA2 secretion associated Ras related GTPase 1B protein-coding chr1-9814 chr1 59777761 59777971 + 9.90 0.000 intron (NR_110627, intron 2 of 2) intron (NR_110627, intron 2 of 2) 5071 NR_110627 101926944 Hs.720353 NR_110627 LOC101926944 - uncharacterized LOC101926944 ncRNA chr9-6420 chr9 69899541 69899751 + 9.90 0.000 intron (NM_001010940, intron 5 of 5) MER68|LTR|ERVL 78829 NM_001308086 138255 Hs.444459 NM_001010940 ENSG00000204711 C9orf135 - chromosome 9 open reading frame 135 protein-coding chr11-7758 chr11 78310975 78311185 + 9.90 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) 30800 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr9-2150 chr9 122319072 122319282 + 9.90 0.000 intron (NR_144421, intron 8 of 8) AluY|SINE|Alu -51356 NM_001271166 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr9-4969 chr9 18055698 18055908 + 9.90 0.000 Intergenic Intergenic -418350 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr1-4920 chr1 43472944 43473154 + 9.90 0.000 Intergenic Intergenic -19060 NM_001190880 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr4-4669 chr4 84948071 84948281 + 9.90 0.000 intron (NM_014991, intron 1 of 67) intron (NM_014991, intron 1 of 67) -17440 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr12-3111 chr12 27179767 27179977 + 9.90 0.000 Intergenic Intergenic -64414 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr18-1526 chr18 10068537 10068747 + 9.90 0.000 Intergenic Intergenic 154626 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr1-4141 chr1 3592994 3593204 + 9.90 0.000 intron (NM_001409, intron 3 of 36) intron (NM_001409, intron 3 of 36) 18409 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chrX-2531 chrX 98063136 98063346 + 9.90 0.000 Intergenic AluJr|SINE|Alu -498706 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr2-12441 chr2 58486444 58486654 + 9.90 0.000 Intergenic Intergenic -34204 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr2-6347 chr2 86758085 86758295 + 9.90 0.000 intron (NM_022780, intron 4 of 8) L1ME4b|LINE|L1 33524 NM_171827 925 Hs.85258 NM_001768 ENSG00000153563 CD8A CD8|Leu2|p32 CD8a molecule protein-coding chr9-2121 chr9 98886524 98886734 + 9.90 0.000 Intergenic Intergenic -57278 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr18-489 chr18 8548190 8548400 + 9.90 0.000 Intergenic LTR101_Mam|LTR|ERVL -61150 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr20-502 chr20 37408357 37408567 + 9.90 0.000 Intergenic Intergenic 62334 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr15-1438 chr15 70196647 70196857 + 9.90 0.000 Intergenic Intergenic -98835 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr1-11573 chr1 201766282 201766492 + 9.90 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 26487 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr8-4850 chr8 37691295 37691505 + 9.90 0.000 Intergenic Intergenic -4382 NM_025069 80139 Hs.288042 NM_025069 ENSG00000183779 ZNF703 NLZ1|ZEPPO1|ZNF503L|ZPO1 zinc finger protein 703 protein-coding chrX-1118 chrX 20361969 20362179 + 9.90 0.000 Intergenic Intergenic -95165 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr5-5338 chr5 130685529 130685739 + 9.90 0.000 Intergenic MIR3|SINE|MIR 479622 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr7-5050 chr7 1629838 1630048 + 9.90 0.000 Intergenic L1MC|LINE|L1 15473 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr12-4113 chr12 62767589 62767799 + 9.90 0.000 intron (NM_020700, intron 4 of 9) MLT1C|LTR|ERVL-MaLR 164008 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr1-3572 chr1 2029456 2029666 + 9.90 0.000 exon (NM_000815, exon 8 of 9) exon (NM_000815, exon 8 of 9) 10216 NM_000815 2563 Hs.113882 NM_000815 ENSG00000187730 GABRD EIG10|EJM7|GEFSP5 gamma-aminobutyric acid type A receptor delta subunit protein-coding chr13-2733 chr13 95798872 95799082 + 9.90 0.000 Intergenic Intergenic 121838 NM_006260 5611 Hs.59214 NM_006260 ENSG00000102580 DNAJC3 ACPHD|ERdj6|HP58|P58|P58IPK|PRKRI DnaJ heat shock protein family (Hsp40) member C3 protein-coding chr2-8153 chr2 84233775 84233985 + 9.90 0.000 Intergenic Intergenic -56802 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr5-2536 chr5 169802123 169802333 + 9.90 0.000 intron (NR_156756, intron 25 of 52) AluSx|SINE|Alu 164953 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr1-6764 chr1 76066486 76066696 + 9.90 0.000 Intergenic Intergenic -8155 NM_001349105 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr1-11297 chr1 14544684 14544894 + 9.90 0.000 Intergenic AluJo|SINE|Alu -53896 NM_201628 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr11-7075 chr11 121222993 121223203 + 9.90 0.000 Intergenic L2|LINE|L2 -69673 NM_006918 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr5-3343 chr5 135656915 135657125 + 9.90 0.000 intron (NM_001349335, intron 3 of 10) intron (NM_001349335, intron 3 of 10) -3085 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr2-2949 chr2 17979851 17980061 + 9.90 0.000 Intergenic Intergenic 101289 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr5-5612 chr5 152689996 152690206 + 9.90 0.000 intron (NR_109877, intron 3 of 4) MIRb|SINE|MIR 282248 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr4-1570 chr4 3449129 3449339 + 9.90 0.000 intron (NM_001528, intron 13 of 13) intron (NM_001528, intron 13 of 13) 7266 NM_001297439 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr1-7194 chr1 213406708 213406918 + 9.90 0.000 Intergenic MIRb|SINE|MIR 355572 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr14-1280 chr14 85217464 85217674 + 9.90 0.000 Intergenic Intergenic -54363 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr7-3524 chr7 6248540 6248750 + 9.90 0.000 intron (NM_001367581, intron 1 of 13) intron (NM_001367581, intron 1 of 13) 23979 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr10-2307 chr10 34526502 34526712 + 9.90 0.000 intron (NM_001184789, intron 2 of 22) intron (NM_001184789, intron 2 of 22) 288689 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr2-9471 chr2 235255842 235256052 + 9.90 0.000 Intergenic Intergenic 228212 NM_001371306 chr2-6386 chr2 113954264 113954474 + 9.90 0.000 intron (NM_005721, intron 10 of 11) L1MC4|LINE|L1 -14953 NR_148507 440900 Hs.662205 NR_034128 ENSG00000234199 LINC01191 VIN|lnc-ACTR3 long intergenic non-protein coding RNA 1191 ncRNA chr11-4042 chr11 11969818 11970028 + 9.90 0.000 intron (NM_015881, intron 4 of 7) MIRb|SINE|MIR 38716 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr22-1060 chr22 17938589 17938799 + 9.90 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) -31808 NM_001122731 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chrX-4798 chrX 99846273 99846483 + 9.90 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 563895 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr9-6243 chr9 125293009 125293219 + 9.90 0.000 intron (NM_001354297, intron 3 of 27) intron (NM_001354297, intron 3 of 27) 31288 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr5-4472 chr5 8059587 8059797 + 9.90 0.000 Intergenic Intergenic 190544 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr11-6161 chr11 44221473 44221683 + 9.90 0.000 intron (NM_207122, intron 10 of 13) intron (NM_207122, intron 10 of 13) 88561 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr1-11704 chr1 8497530 8497740 + 9.90 0.000 intron (NM_001042681, intron 8 of 22) intron (NM_001042681, intron 8 of 22) -2722 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr19-6362 chr19 11820137 11820347 + 9.90 0.000 intron (NM_152357, intron 1 of 3) AluY|SINE|Alu 5969 NM_152357 126070 Hs.418192 NM_152357 ENSG00000171295 ZNF440 - zinc finger protein 440 protein-coding chr2-7922 chr2 58920214 58920424 + 9.90 0.000 intron (NR_033873, intron 4 of 13) intron (NR_033873, intron 4 of 13) -297389 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr14-1018 chr14 20971017 20971227 + 9.90 0.000 Intergenic Intergenic 15635 NM_002934 6036 Hs.728 NM_002934 ENSG00000169385 RNASE2 EDN|RAF3|RNS2 ribonuclease A family member 2 protein-coding chr5-1132 chr5 90734528 90734738 + 9.90 0.000 intron (NR_003149, intron 50 of 89) AluSg4|SINE|Alu 175836 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chrX-3676 chrX 104745070 104745280 + 9.90 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 178976 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr8-3673 chr8 16074608 16074818 + 9.90 0.000 Intergenic Intergenic 111559 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr15-2979 chr15 51332691 51332901 + 9.90 0.000 intron (NM_031226, intron 1 of 10) L1MEj|LINE|L1 5800 NM_000103 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr4-5391 chr4 2019748 2019958 + 9.90 0.000 Intergenic Intergenic -10879 NM_005663 7469 Hs.21771 NM_005663 ENSG00000185049 NELFA NELF-A|P/OKcl.15|WHSC2 negative elongation factor complex member A protein-coding chr5-1609 chr5 55440232 55440442 + 9.90 0.000 intron (NR_103485, intron 5 of 6) intron (NR_103485, intron 5 of 6) 68589 NR_049869 100847019 NR_049869 ENSG00000265135 MIR5687 - microRNA 5687 ncRNA chr9-1499 chr9 136800530 136800740 + 9.90 0.000 intron (NM_001039374, intron 5 of 13) intron (NM_001039374, intron 5 of 13) 4297 NM_001039374 84960 Hs.728796 NM_032874 ENSG00000213213 CCDC183 KIAA1984|PARF|bA216L13.7 coiled-coil domain containing 183 protein-coding chr6-1958 chr6 132598626 132598836 + 9.90 0.000 Intergenic Intergenic -8993 NM_003967 9038 Hs.248198 NM_003967 ENSG00000135569 TAAR5 PNR trace amine associated receptor 5 protein-coding chr15-2816 chr15 38614411 38614621 + 9.90 0.000 Intergenic LTR78|LTR|ERV1 -49702 NM_001128602 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr2-4311 chr2 235888671 235888881 + 9.90 0.000 intron (NM_001037131, intron 10 of 17) intron (NM_001037131, intron 10 of 17) 279610 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chrX-1341 chrX 136214287 136214497 + 9.90 0.000 3' UTR (NM_001173517, exon 18 of 18) 3' UTR (NM_001173517, exon 18 of 18) 9490 NM_001369331 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr5-7335 chr5 16833692 16833902 + 9.90 0.000 intron (NM_012334, intron 2 of 40) MIRb|SINE|MIR 102491 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr21-1188 chr21 43734619 43734829 + 9.90 0.000 intron (NM_003681, intron 2 of 10) intron (NM_003681, intron 2 of 10) -6762 NM_001331030 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr10-8479 chr10 88996167 88996377 + 9.90 0.000 intron (NR_135314, intron 1 of 8) intron (NR_135314, intron 1 of 8) -3297 NR_028371 100302740 Hs.244139 NR_028371 FAS-AS1 FAS-AS|FASAS|SAF FAS antisense RNA 1 ncRNA chr16-4491 chr16 57355289 57355499 + 9.90 0.000 Intergenic L1MB3|LINE|L1 -3389 NM_002990 6367 Hs.534347 NM_002990 ENSG00000102962 CCL22 A-152E5.1|ABCD-1|DC/B-CK|MDC|SCYA22|STCP-1 C-C motif chemokine ligand 22 protein-coding chr6-1778 chr6 87714366 87714576 + 9.90 0.000 Intergenic MIR|SINE|MIR -12238 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr2-9197 chr2 216557075 216557285 + 9.90 0.000 Intergenic MIRb|SINE|MIR 49758 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA KI270587.1-1 KI270587.1 507 717 + 9.90 0.000 NA NA NA NA chr11-3492 chr11 110093639 110093849 + 9.90 0.000 intron (NM_033390, intron 1 of 5) CpG 352 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr5-3733 chr5 32712292 32712502 + 9.90 0.000 exon (NM_001204375, exon 1 of 8) exon (NM_001204375, exon 1 of 8) 1076 NM_001204375 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr6-1758 chr6 60571729 60571939 + 9.90 0.000 Intergenic Intergenic -1002296 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr12-3659 chr12 115136013 115136223 + 9.90 0.000 Intergenic Intergenic -451943 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr20-2800 chr20 56610393 56610603 + 9.90 0.000 Intergenic Intergenic -18808 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr15-3461 chr15 93051557 93051767 + 9.90 0.000 intron (NM_001166286, intron 2 of 2) MIRb|SINE|MIR 21494 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr14-1339 chr14 77301239 77301449 + 9.90 0.000 intron (NM_013382, intron 5 of 20) intron (NM_013382, intron 5 of 20) 19538 NM_013382 29954 Hs.132989 NM_013382 ENSG00000009830 POMT2 LGMD2N|LGMDR14|MDDGA2|MDDGB2|MDDGC2 protein O-mannosyltransferase 2 protein-coding chr2-7921 chr2 58854815 58855025 + 9.90 0.000 intron (NR_033873, intron 3 of 13) intron (NR_033873, intron 3 of 13) 334167 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr10-5660 chr10 97724464 97724674 + 9.90 0.000 Intergenic Intergenic 10839 NM_031484 83742 Hs.744073 NM_031484 ENSG00000155254 MARVELD1 GB14|MARVD1|MRVLDC1|bA548K23.8 MARVEL domain containing 1 protein-coding chr9-3245 chr9 5715023 5715233 + 9.90 0.000 intron (NM_001206557, intron 4 of 24) intron (NM_001206557, intron 4 of 24) 86009 NM_001206557 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr21-1640 chr21 22928358 22928568 + 9.90 0.000 Intergenic Intergenic -150821 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA chr2-8252 chr2 99420090 99420300 + 9.90 0.000 intron (NR_135652, intron 11 of 21) intron (NR_135652, intron 11 of 21) 69822 NM_001321455 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr22-2574 chr22 28485387 28485597 + 9.90 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) 25623 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr17-3318 chr17 64616564 64616774 + 9.90 0.000 intron (NM_022739, intron 1 of 18) AluSx3|SINE|Alu 45638 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr2-5660 chr2 198667354 198667564 + 9.90 0.000 Intergenic Intergenic -292362 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr19-4606 chr19 12955097 12955307 + 9.90 0.000 intron (NM_052850, intron 1 of 1) L1PA13|LINE|L1 2021 NM_052850 90480 Hs.515164 NM_052850 ENSG00000179271 GADD45GIP1 CKBBP2|CKbetaBP2|CRIF1|MRP-L59|PLINP|PLINP-1|PRG6|Plinp1 GADD45G interacting protein 1 protein-coding chr1-16459 chr1 228011475 228011685 + 9.90 0.000 intron (NM_033131, intron 1 of 3) intron (NM_033131, intron 1 of 3) 4582 NM_033131 89780 Hs.336930 NM_033131 ENSG00000154342 WNT3A - Wnt family member 3A protein-coding chr1-8736 chr1 239227010 239227220 + 9.90 0.000 Intergenic L1M2|LINE|L1 -159453 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr4-6204 chr4 53050520 53050730 + 9.90 0.000 intron (NM_152540, intron 5 of 8) L2c|LINE|L2 188308 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr6-3867 chr6 44386537 44386747 + 9.90 0.000 Intergenic Intergenic -1064 NM_001253 988 Hs.485471 NM_001253 ENSG00000096401 CDC5L CDC5|CDC5-LIKE|CEF1|PCDC5RP|dJ319D22.1 cell division cycle 5 like protein-coding chr10-6051 chr10 127942069 127942279 + 9.90 0.000 intron (NM_001323356, intron 1 of 19) intron (NM_001323356, intron 1 of 19) 35071 NM_001316676 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr13-1430 chr13 45086415 45086625 + 9.90 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -19759 NR_120424 101929259 Hs.638490 NR_120424 LOC101929259 - uncharacterized LOC101929259 ncRNA chr6-4800 chr6 78824161 78824371 + 9.90 0.000 Intergenic L1M1|LINE|L1 -43285 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chr6-2272 chr6 73461257 73461467 + 9.90 0.000 promoter-TSS (NM_012123) promoter-TSS (NM_012123) -375 NM_012123 25821 Hs.347614 NM_012123 ENSG00000135297 MTO1 CGI-02|COXPD10 mitochondrial tRNA translation optimization 1 protein-coding chr1-11088 chr1 228355800 228356010 + 9.90 0.000 intron (NM_001271223, intron 90 of 115) intron (NM_001271223, intron 90 of 115) 41204 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr12-1345 chr12 3236452 3236662 + 9.90 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 129565 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr11-6241 chr11 48701987 48702197 + 9.90 0.000 Intergenic L1PA3|LINE|L1 213299 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding chr2-4469 chr2 235336673 235336883 + 9.90 0.000 Intergenic Intergenic -157265 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr1-6840 chr1 100494468 100494678 + 9.90 0.000 intron (NM_001319212, intron 10 of 13) intron (NM_001319212, intron 10 of 13) -43566 NM_022049 54112 Hs.170053 NM_022049 ENSG00000181656 GPR88 COCPMR|STRG G protein-coupled receptor 88 protein-coding chr3-4341 chr3 180410117 180410327 + 9.90 0.000 Intergenic Intergenic -3951 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr5-4070 chr5 57176494 57176704 + 9.90 0.000 intron (NM_001331037, intron 2 of 12) intron (NM_001331037, intron 2 of 12) 1151 NM_001127235 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr5-3807 chr5 90131701 90131911 + 9.90 0.000 Intergenic Intergenic -115086 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr10-4675 chr10 131034562 131034772 + 9.90 0.000 Intergenic Intergenic -60551 NR_120623 101927489 Hs.659317 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA chr12-4894 chr12 65355930 65356140 + 9.90 0.000 intron (NM_001031679, intron 4 of 6) intron (NM_001031679, intron 4 of 6) 77048 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr5-6745 chr5 79084786 79084996 + 9.90 0.000 intron (NM_001178005, intron 6 of 6) HAL1ME|LINE|L1 15124 NM_017614 23743 Hs.114172 NM_017614 ENSG00000132840 BHMT2 - betaine--homocysteine S-methyltransferase 2 protein-coding chr13-3683 chr13 35468266 35468476 + 9.90 0.000 intron (NM_015678, intron 40 of 57) MER90a|LTR|ERV1 8318 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr15-3855 chr15 87871193 87871403 + 9.90 0.000 3' UTR (NM_002530, exon 19 of 19) 3' UTR (NM_002530, exon 19 of 19) 74970 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr13-1500 chr13 113363621 113363831 + 9.90 0.000 intron (NM_024719, intron 2 of 7) CpG 404 NM_024719 79774 Hs.745043 NM_024719 ENSG00000139835 GRTP1 TBC1D6 growth hormone regulated TBC protein 1 protein-coding chr11-7412 chr11 96596365 96596575 + 9.90 0.000 Intergenic Intergenic 88045 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr11-9751 chr11 68980880 68981090 + 9.90 0.000 promoter-TSS (NM_198923) promoter-TSS (NM_198923) 1 NM_198923 116512 Hs.527802 NM_198923 ENSG00000172938 MRGPRD MRGD|TGR7 MAS related GPR family member D protein-coding chr8-4398 chr8 105303505 105303715 + 9.90 0.000 Intergenic MIRb|SINE|MIR -14828 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr10-5526 chr10 84952265 84952475 + 9.90 0.000 Intergenic Intergenic 246535 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr4-3633 chr4 14772008 14772218 + 9.90 0.000 intron (NR_126435, intron 2 of 6) MIRb|SINE|MIR 116056 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr10-3375 chr10 22849273 22849483 + 9.90 0.000 Intergenic Intergenic -78646 NM_001282747 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding chr11-6107 chr11 36143355 36143565 + 9.90 0.000 intron (NM_001304263, intron 3 of 4) intron (NM_001304263, intron 3 of 4) -65559 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr10-2813 chr10 3080811 3081021 + 9.90 0.000 intron (NM_001242339, intron 2 of 23) intron (NM_001242339, intron 2 of 23) 11727 NM_001345944 5214 Hs.26010 NM_002627 ENSG00000067057 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding chr16-4453 chr16 55139060 55139270 + 9.90 0.000 Intergenic Intergenic -185394 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr7-2505 chr7 32998825 32999035 + 9.90 0.000 intron (NM_007270, intron 7 of 9) intron (NM_007270, intron 7 of 9) 19456 NM_001284343 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr7-2777 chr7 73410730 73410940 + 9.90 0.000 Intergenic Intergenic -22943 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chrX-982 chrX 153479252 153479462 + 9.90 0.000 intron (NR_073156, intron 1 of 12) intron (NR_073156, intron 1 of 12) -8726 NM_017518 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr8-3695 chr8 18351215 18351425 + 9.90 0.000 Intergenic Intergenic -39962 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr1-12734 chr1 59173100 59173310 + 9.90 0.000 Intergenic L1ME3A|LINE|L1 -26398 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr20-619 chr20 19758059 19758269 + 9.90 0.000 Intergenic CpG -128357 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr5-1976 chr5 141488791 141489001 + 9.90 0.000 promoter-TSS (NM_032407) promoter-TSS (NM_032407) -185 NM_018929 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr10-5011 chr10 32894912 32895122 + 9.90 0.000 Intergenic LTR5A|LTR|ERVK 6455 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr15-1939 chr15 94259374 94259584 + 9.90 0.000 Intergenic Intergenic -38722 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr6-4914 chr6 97250332 97250542 + 9.90 0.000 intron (NM_001350600, intron 9 of 23) intron (NM_001350600, intron 9 of 23) 32779 NM_001350599 253714 Hs.444292 NM_198468 ENSG00000146263 MMS22L C6orf167|dJ39B17.2 MMS22 like, DNA repair protein protein-coding chr1-12830 chr1 89719021 89719231 + 9.90 0.000 3' UTR (NM_032270, exon 3 of 3) 3' UTR (NM_032270, exon 3 of 3) 86006 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr3-7204 chr3 191066876 191067086 + 9.90 0.000 Intergenic Intergenic -132260 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding chr9-3138 chr9 95756982 95757192 + 9.90 0.000 Intergenic Intergenic -118604 NM_020207 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr1-11242 chr1 247995026 247995236 + 9.90 0.000 intron (NM_001304535, intron 1 of 1) intron (NM_001304535, intron 1 of 1) 4864 NR_002145 26247 Hs.684887 NR_002145 ENSG00000224227 OR2L1P HSHTPCRX02|HTPCRX02|OR2L1|OR2L7P olfactory receptor family 2 subfamily L member 1 pseudogene pseudo chr11-6653 chr11 75504039 75504249 + 9.90 0.000 intron (NM_030792, intron 1 of 16) intron (NM_030792, intron 1 of 16) 21429 NM_001351168 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr4-2923 chr4 89134899 89135109 + 9.90 0.000 Intergenic Intergenic 22187 NM_145715 166815 Hs.58924 NM_145715 ENSG00000180346 TIGD2 HEL106 tigger transposable element derived 2 protein-coding chr7-7829 chr7 4131756 4131966 + 9.90 0.000 intron (NR_158215, intron 1 of 1) intron (NR_158215, intron 1 of 1) 2176 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr8-3267 chr8 14352322 14352532 + 9.90 0.000 intron (NM_001322881, intron 2 of 6) intron (NM_001322881, intron 2 of 6) 501083 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr11-10763 chr11 134717936 134718146 + 9.90 0.000 Intergenic MLT1H1-int|LTR|ERVL-MaLR -17904 NR_147836 729305 Hs.148365 NR_147836 ENSG00000251226 LINC02714 - long intergenic non-protein coding RNA 2714 ncRNA chrX-737 chrX 9467833 9468043 + 9.90 0.000 intron (NM_005647, intron 1 of 17) intron (NM_005647, intron 1 of 17) 2880 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr19-2064 chr19 12687739 12687949 + 9.90 0.000 promoter-TSS (NM_001316692) promoter-TSS (NM_001316692) -154 NM_001316692 105372280 Hs.535131 NM_001316692 ENSG00000283980 GNG14 - G protein subunit gamma 14 protein-coding chr2-8132 chr2 80849354 80849564 + 9.90 0.000 Intergenic Intergenic 536080 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr11-4384 chr11 76731710 76731920 + 9.90 0.000 Intergenic Intergenic -10026 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr10-3524 chr10 72615311 72615521 + 9.90 0.000 intron (NM_006077, intron 1 of 11) intron (NM_006077, intron 1 of 11) 10663 NM_001195518 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr19-3541 chr19 45071047 45071257 + 9.90 0.000 TTS (NM_145288) TTS (NM_145288) -4475 NM_001319055 79760 Hs.466919 NM_024707 ENSG00000142252 GEMIN7 SIP3 gem nuclear organelle associated protein 7 protein-coding chr10-2416 chr10 258361 258571 + 9.90 0.000 Intergenic L1ME4b|LINE|L1 78472 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr19-4432 chr19 4267102 4267312 + 9.90 0.000 intron (NM_018074, intron 6 of 7) L2b|LINE|L2 -11394 NM_020209 56961 Hs.7423 NM_020209 ENSG00000105251 SHD - Src homology 2 domain containing transforming protein D protein-coding chr7-2839 chr7 102028476 102028686 + 9.90 0.000 intron (NM_001913, intron 3 of 22) intron (NM_001913, intron 3 of 22) 210955 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr7-5008 chr7 662727 662937 + 9.90 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 49692 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr8-1879 chr8 22473005 22473215 + 9.90 0.000 intron (NM_005605, intron 1 of 13) intron (NM_005605, intron 1 of 13) 32140 NM_001243975 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr11-10037 chr11 82703448 82703658 + 9.90 0.000 Intergenic Intergenic 30311 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr8-1408 chr8 52256513 52256723 + 9.90 0.000 intron (NR_148195, intron 2 of 3) intron (NR_148195, intron 2 of 3) -2126 NM_001352845 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr14-4942 chr14 74322757 74322967 + 9.90 0.000 Intergenic AluSx|SINE|Alu -19928 NM_001353596 5826 Hs.94395 NM_005050 ENSG00000119688 ABCD4 ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L ATP binding cassette subfamily D member 4 protein-coding chr3-9262 chr3 39871065 39871275 + 9.90 0.000 intron (NM_001284424, intron 1 of 15) intron (NM_001284424, intron 1 of 15) 61510 NM_001284425 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr14-3321 chr14 88005142 88005352 + 9.90 0.000 intron (NM_003608, intron 1 of 1) intron (NM_003608, intron 1 of 1) 112 NM_003608 8477 Hs.443243 NM_003608 ENSG00000140030 GPR65 TDAG8|hTDAG8 G protein-coupled receptor 65 protein-coding chr18-588 chr18 37231317 37231527 + 9.90 0.000 non-coding (NR_136303, exon 13 of 14) non-coding (NR_136303, exon 13 of 14) -43038 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr1-7908 chr1 156423992 156424202 + 9.90 0.000 intron (NM_006365, intron 2 of 6) intron (NM_006365, intron 2 of 6) -2325 NR_135268 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr3-4949 chr3 10138708 10138918 + 9.90 0.000 Intergenic AluJb|SINE|Alu -2822 NM_000551 7428 Hs.517792 NM_000551 ENSG00000134086 VHL HRCA1|RCA1|VHL1|pVHL von Hippel-Lindau tumor suppressor protein-coding chr12-2735 chr12 14957657 14957867 + 9.90 0.000 intron (NM_001321420, intron 1 of 6) intron (NM_001321420, intron 1 of 6) 3518 NM_001321421 397 Hs.504877 NM_001175 ENSG00000111348 ARHGDIB D4|GDIA2|GDID4|LYGDI|Ly-GDI|RAP1GN1|RhoGDI2 Rho GDP dissociation inhibitor beta protein-coding chr10-9049 chr10 124506437 124506647 + 9.90 0.000 intron (NM_001167880, intron 5 of 5) MIRc|SINE|MIR 44719 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr11-10739 chr11 132558922 132559132 + 9.90 0.000 intron (NM_002545, intron 2 of 6) intron (NM_002545, intron 2 of 6) 274725 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr17-8225 chr17 64539731 64539941 + 9.90 0.000 Intergenic Intergenic 32859 NM_001316990 90799 Hs.569713 NM_138363 ENSG00000258890 CEP95 CCDC45 centrosomal protein 95 protein-coding chr9-5422 chr9 96209439 96209649 + 9.90 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -36919 NR_146524 105376162 Hs.662614 NR_146524 ENSG00000232283 HSD17B3-AS1 - HSD17B3 antisense RNA 1 ncRNA chrX-2385 chrX 70480888 70481098 + 9.90 0.000 intron (NM_020730, intron 4 of 13) intron (NM_020730, intron 4 of 13) -24999 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr11-4204 chr11 62260969 62261179 + 9.90 0.000 Intergenic Intergenic -9084 NM_002411 4250 Hs.46452 NM_002411 ENSG00000110484 SCGB2A2 MGB1|UGB2 secretoglobin family 2A member 2 protein-coding chr16-3215 chr16 85423910 85424120 + 9.90 0.000 Intergenic Intergenic -117690 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr12-3359 chr12 94187562 94187772 + 9.90 0.000 intron (NM_005761, intron 4 of 30) intron (NM_005761, intron 4 of 30) 39090 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr22-1257 chr22 24042941 24043151 + 9.90 0.000 exon (NM_001199281, exon 6 of 37) exon (NM_001199281, exon 6 of 37) 31676 NM_001199281 23523 Hs.517478 NM_012295 ENSG00000099991 CABIN1 CAIN|KB-318B8.7|PPP3IN calcineurin binding protein 1 protein-coding chr18-2947 chr18 14840959 14841169 + 9.90 0.000 intron (NM_001367607, intron 37 of 43) intron (NM_001367607, intron 37 of 43) 10898 NR_036153 100422907 NR_036153 ENSG00000265499 MIR3156-2 mir-3156-2 microRNA 3156-2 ncRNA chr5-3878 chr5 142783643 142783853 + 9.90 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 12521 NM_001349547 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr2-6424 chr2 145752535 145752745 + 9.90 0.000 Intergenic Intergenic -834417 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-9112 chr2 206706020 206706230 + 9.90 0.000 intron (NM_001093730, intron 3 of 11) L2a|LINE|L2 12271 NM_001093730 391475 Hs.640667 NM_001093730 ENSG00000232125 DYTN - dystrotelin protein-coding chr4-4314 chr4 29972392 29972602 + 9.90 0.000 Intergenic Intergenic -747872 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr9-6203 chr9 98020624 98020834 + 9.90 0.000 Intergenic Intergenic -36003 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr6-5388 chr6 152428160 152428370 + 9.90 0.000 exon (NM_033071, exon 37 of 146) exon (NM_033071, exon 37 of 146) 47735 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr7-8418 chr7 46146484 46146694 + 9.90 0.000 Intergenic Intergenic -225317 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr19-3528 chr19 42651173 42651383 + 9.90 0.000 non-coding (NR_073180, exon 3 of 3) non-coding (NR_073180, exon 3 of 3) -56354 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chrX-1544 chrX 43874783 43874993 + 9.90 0.000 intron (NM_000898, intron 1 of 14) intron (NM_000898, intron 1 of 14) 7562 NM_000898 4129 Hs.654473 NM_000898 ENSG00000069535 MAOB - monoamine oxidase B protein-coding chr22-2280 chr22 34167950 34168160 + 9.90 0.000 Intergenic Intergenic -245167 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr10-4888 chr10 18478327 18478537 + 9.90 0.000 intron (NM_201593, intron 3 of 13) intron (NM_201593, intron 3 of 13) 77857 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr3-4415 chr3 6831048 6831258 + 9.90 0.000 Intergenic Intergenic -25704 NR_110123 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chrX-821 chrX 97074558 97074768 + 9.90 0.000 intron (NM_007309, intron 18 of 26) intron (NM_007309, intron 18 of 26) 190755 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr8-5613 chr8 96572143 96572353 + 9.90 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -72994 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr9-5227 chr9 76298641 76298851 + 9.90 0.000 intron (NM_001190482, intron 27 of 36) intron (NM_001190482, intron 27 of 36) 95680 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr9-6800 chr9 34996377 34996587 + 9.90 0.000 exon (NM_001135004, exon 4 of 5) exon (NM_001135004, exon 4 of 5) 6192 NM_001135005 25822 Hs.237506 NM_012266 ENSG00000137094 DNAJB5 Hsc40 DnaJ heat shock protein family (Hsp40) member B5 protein-coding chr13-2152 chr13 108326629 108326839 + 9.90 0.000 Intergenic L2c|LINE|L2 57105 NM_001145645 10673 Hs.525157 NM_006573 ENSG00000102524 TNFSF13B BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4 TNF superfamily member 13b protein-coding chr15-2794 chr15 35771948 35772158 + 9.90 0.000 intron (NR_038251, intron 2 of 2) intron (NR_038251, intron 2 of 2) -154803 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr7-2752 chr7 46513404 46513614 + 9.90 0.000 Intergenic Intergenic 183613 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr1-9530 chr1 39475618 39475828 + 9.90 0.000 intron (NM_012090, intron 90 of 92) intron (NM_012090, intron 90 of 92) -15913 NM_181809 353500 Hs.472497 NM_181809 ENSG00000183682 BMP8A - bone morphogenetic protein 8a protein-coding chr11-9194 chr11 36785322 36785532 + 9.90 0.000 Intergenic L2a|LINE|L2 -187148 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr1-3407 chr1 231338838 231339048 + 9.90 0.000 intron (NM_001261462, intron 1 of 2) intron (NM_001261462, intron 1 of 2) 650 NM_032018 83932 Hs.554892 NM_032018 ENSG00000010072 SPRTN C1orf124|DVC1|PRO4323|spartan SprT-like N-terminal domain protein-coding chr9-6440 chr9 78954681 78954891 + 9.90 0.000 Intergenic Intergenic 190880 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr17-5896 chr17 72974563 72974773 + 9.90 0.000 intron (NM_001352692, intron 4 of 9) Tigger3b|DNA|TcMar-Tigger 118020 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr12-6708 chr12 4837123 4837333 + 9.90 0.000 intron (NM_002235, intron 1 of 1) MER21B|LTR|ERVL 28052 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding chr4-2130 chr4 75848391 75848601 + 9.90 0.000 Intergenic AluSx1|SINE|Alu 53956 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr2-9631 chr2 13352431 13352641 + 9.90 0.000 Intergenic AluSg|SINE|Alu -345523 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr2-9419 chr2 232290083 232290293 + 9.90 0.000 intron (NR_046477, intron 12 of 18) intron (NR_046477, intron 12 of 18) -88563 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr19-4735 chr19 22405356 22405566 + 9.90 0.000 intron (NM_001098626, intron 1 of 3) L1PREC2|LINE|L1 16885 NM_001098626 148198 Hs.667355 NM_001098626 ENSG00000197360 ZNF98 F7175|ZNF739 zinc finger protein 98 protein-coding chr3-1378 chr3 50601127 50601337 + 9.90 0.000 Intergenic Intergenic 10542 NM_013324 1154 Hs.655334 NM_013324 ENSG00000114737 CISH BACTS2|CIS|CIS-1|G18|SOCS cytokine inducible SH2 containing protein protein-coding chr6-4742 chr6 68962959 68963169 + 9.90 0.000 intron (NM_001704, intron 8 of 31) intron (NM_001704, intron 8 of 31) 327782 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr12-5020 chr12 83933656 83933866 + 9.90 0.000 Intergenic L1MA10|LINE|L1 979038 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr3-7810 chr3 97883479 97883689 + 9.90 0.000 intron (NM_153605, intron 7 of 21) intron (NM_153605, intron 7 of 21) 61573 NM_153605 131544 Hs.733378 NM_153605 ENSG00000080200 CRYBG3 DKFZp667G2110|vlAKAP crystallin beta-gamma domain containing 3 protein-coding chr3-4038 chr3 71210875 71211085 + 9.90 0.000 intron (NR_146142, intron 5 of 19) intron (NR_146142, intron 5 of 19) 34097 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr11-3979 chr11 2211403 2211613 + 9.90 0.000 Intergenic Intergenic 38445 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr17-4113 chr17 81324223 81324433 + 9.90 0.000 Intergenic Intergenic -15080 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr10-8202 chr10 72303069 72303279 + 9.90 0.000 Intergenic AluSx|SINE|Alu 29250 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr10-8169 chr10 71241231 71241441 + 9.90 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -23108 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr18-1713 chr18 2779075 2779285 + 9.90 0.000 intron (NM_015295, intron 44 of 47) intron (NM_015295, intron 44 of 47) -67826 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr1-8434 chr1 94522407 94522617 + 9.90 0.000 Intergenic Intergenic 19247 NM_001993 2152 Hs.62192 NM_001993 ENSG00000117525 F3 CD142|TF|TFA coagulation factor III, tissue factor protein-coding chr9-2771 chr9 109311691 109311901 + 9.90 0.000 intron (NM_019114, intron 1 of 25) MIRc|SINE|MIR 9168 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr11-4630 chr11 17813047 17813257 + 9.90 0.000 intron (NR_104040, intron 11 of 11) MIRc|SINE|MIR 77204 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr11-2855 chr11 9231212 9231422 + 9.90 0.000 intron (NR_145966, intron 1 of 21) intron (NR_145966, intron 1 of 21) 34009 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr7-4756 chr7 73526956 73527166 + 9.90 0.000 Intergenic Intergenic -4768 NM_032408 9031 Hs.743372 NM_023005 ENSG00000009954 BAZ1B WBSCR10|WBSCR9|WSTF bromodomain adjacent to zinc finger domain 1B protein-coding chr6-5519 chr6 166754677 166754887 + 9.90 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 107743 NM_001318937 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr12-5492 chr12 125749150 125749360 + 9.90 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 126803 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr3-7016 chr3 171262506 171262716 + 9.90 0.000 intron (NM_001161563, intron 2 of 31) intron (NM_001161563, intron 2 of 31) -155852 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chrX-2498 chrX 93128334 93128544 + 9.90 0.000 Intergenic MSTC|LTR|ERVL-MaLR -303536 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-2761 chr7 55094350 55094560 + 9.90 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -15384 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr11-3346 chr11 119628544 119628754 + 9.90 0.000 Intergenic Intergenic 100551 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr2-10436 chr2 203532495 203532705 + 9.90 0.000 intron (NM_001329728, intron 1 of 15) MIR|SINE|MIR 2701 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr5-4445 chr5 3161716 3161926 + 9.90 0.000 Intergenic Intergenic -16014 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr19-5233 chr19 41898019 41898229 + 9.90 0.000 intron (NM_198977, intron 12 of 27) intron (NM_198977, intron 12 of 27) 13681 NM_199002 9138 Hs.631550 NM_004706 ENSG00000076928 ARHGEF1 GEF1|IMD62|LBCL2|LSC|P115-RHOGEF|SUB1.5 Rho guanine nucleotide exchange factor 1 protein-coding chr11-7032 chr11 118820793 118821003 + 9.90 0.000 Intergenic Intergenic -29734 NM_004397 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr11-6306 chr11 61698675 61698885 + 9.90 0.000 intron (NM_006133, intron 1 of 19) L2b|LINE|L2 18389 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr11-6643 chr11 75301949 75302159 + 9.90 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 33132 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr5-2952 chr5 152364417 152364627 + 9.90 0.000 Intergenic L1PA11|LINE|L1 40757 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr16-6452 chr16 57023809 57024019 + 9.90 0.000 intron (NM_001330552, intron 5 of 47) intron (NM_001330552, intron 5 of 47) 6840 NM_032206 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr4-3310 chr4 167234022 167234232 + 9.90 0.000 exon (NM_001204358, exon 2 of 8) exon (NM_001204358, exon 2 of 8) 299 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr6-4822 chr6 81822423 81822633 + 9.90 0.000 Intergenic Intergenic -8336 NR_126363 101928770 Hs.586239 NR_126363 ENSG00000224995 LINC01526 Lnc-FAM46A-1 long intergenic non-protein coding RNA 1526 ncRNA chr17-7062 chr17 64612962 64613172 + 9.90 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 49240 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr6-3204 chr6 133054012 133054222 + 9.90 0.000 Intergenic Intergenic -33963 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr6-5456 chr6 158845706 158845916 + 9.90 0.000 intron (NR_028496, intron 2 of 2) AluSc|SINE|Alu 11821 NR_028496 202459 Hs.487035 NM_145303 ENSG00000243775 OSTCP1 DC2L|OSTCL oligosaccharyltransferase complex subunit pseudogene 1 pseudo chr19-3047 chr19 1768694 1768904 + 9.90 0.000 intron (NM_001080488, intron 1 of 1) (TGGAGG)n|Simple_repeat|Simple_repeat 15293 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr14-3428 chr14 98017610 98017820 + 9.90 0.000 Intergenic Intergenic -39591 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr5-5285 chr5 123997670 123997880 + 9.90 0.000 Intergenic Intergenic 440745 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr10-2211 chr10 47559128 47559338 + 9.90 0.000 Intergenic AluSz|SINE|Alu -5710 NR_024495 642826 Hs.463017 NR_024495 BMS1P2 BMS1LP2|BMS1LP6|BMS1P6|bA144G6.1 BMS1 pseudogene 2 pseudo chr2-8534 chr2 131498492 131498702 + 9.90 0.000 intron (NR_026922, intron 2 of 17) intron (NR_026922, intron 2 of 17) 5784 NR_026922 150776 Hs.535622 NR_026922 ENSG00000152117 LOC150776 - sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) pseudogene pseudo chr4-6743 chr4 5346743 5346953 + 9.90 0.000 intron (NM_001306082, intron 5 of 12) THE1D|LTR|ERVL-MaLR -177721 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr13-2720 chr13 94065940 94066150 + 9.90 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) 121946 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr18-1581 chr18 36202889 36203099 + 9.90 0.000 intron (NM_017947, intron 4 of 14) THE1D|LTR|ERVL-MaLR 15497 NM_017947 55034 Hs.405028 NM_017947 ENSG00000075643 MOCOS HMCS|MCS|MOS molybdenum cofactor sulfurase protein-coding chr2-7097 chr2 174786152 174786362 + 9.90 0.000 Intergenic L1MB4|LINE|L1 -21785 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr5-3239 chr5 95165050 95165260 + 9.90 0.000 intron (NM_024717, intron 1 of 22) intron (NM_024717, intron 1 of 22) -83289 NM_001297777 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr17-4463 chr17 57685623 57685833 + 9.90 0.000 Intergenic Intergenic 59571 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr22-1420 chr22 42439781 42439991 + 9.90 0.000 Intergenic Intergenic -1900 NM_001371362 chr7-4295 chr7 23261837 23262047 + 9.90 0.000 intron (NM_002510, intron 6 of 10) intron (NM_002510, intron 6 of 10) 15167 NM_001005340 10457 Hs.190495 NM_002510 ENSG00000136235 GPNMB HGFIN|NMB|PLCA3 glycoprotein nmb protein-coding chrX-5147 chrX 130771953 130772163 + 9.90 0.000 intron (NM_182314, intron 3 of 15) intron (NM_182314, intron 3 of 15) -30578 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr7-2558 chr7 101520921 101521131 + 9.90 0.000 intron (NM_133457, intron 3 of 12) THE1D|LTR|ERVL-MaLR 47980 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr2-14713 chr2 238422146 238422356 + 9.90 0.000 Intergenic Intergenic -4676 NM_001040445 51665 Hs.516788 NM_016114 ENSG00000065802 ASB1 ASB-1 ankyrin repeat and SOCS box containing 1 protein-coding chr6-5188 chr6 130833733 130833943 + 9.90 0.000 intron (NM_001195597, intron 1 of 1) intron (NM_001195597, intron 1 of 1) 6433 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr18-2073 chr18 48311268 48311478 + 9.90 0.000 intron (NM_001371290, intron 5 of 9) intron (NM_001371290, intron 5 of 9) 59072 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr14-2961 chr14 49982209 49982419 + 9.90 0.000 intron (NR_126498, intron 3 of 3) intron (NR_126498, intron 3 of 3) 10820 NR_126499 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr4-3705 chr4 58356851 58357061 + 9.90 0.000 Intergenic ERVL-B4-int|LTR|ERVL 179372 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr2-9324 chr2 224859853 224860063 + 9.90 0.000 intron (NM_001290263, intron 14 of 55) intron (NM_001290263, intron 14 of 55) 87091 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr14-2927 chr14 41558317 41558527 + 9.90 0.000 Intergenic MER92B|LTR|ERV1 -48434 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr22-2482 chr22 21668193 21668403 + 9.90 0.000 intron (NM_148175, intron 1 of 20) MER49|LTR|ERV1 2286 NM_148175 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr4-8314 chr4 144786558 144786768 + 9.90 0.000 Intergenic Intergenic 140507 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr1-5546 chr1 226356064 226356274 + 9.90 0.000 Intergenic Intergenic -46402 NM_001270410 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr18-585 chr18 13532243 13532453 + 9.90 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) 72401 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr12-3386 chr12 102479083 102479293 + 9.90 0.000 promoter-TSS (NM_001111284) promoter-TSS (NM_001111284) -638 NM_001111284 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr2-3205 chr2 219104785 219104995 + 9.90 0.000 intron (NM_024782, intron 5 of 7) intron (NM_024782, intron 5 of 7) -43969 NM_002181 3549 Hs.654504 NM_002181 ENSG00000163501 IHH BDA1|HHG2 Indian hedgehog signaling molecule protein-coding chr10-4383 chr10 44809497 44809707 + 9.90 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -101714 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr7-3751 chr7 75711567 75711777 + 9.90 0.000 intron (NM_005338, intron 1 of 30) intron (NM_005338, intron 1 of 30) 27269 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr9-4941 chr9 14270861 14271071 + 9.90 0.000 intron (NR_161383, intron 1 of 7) intron (NR_161383, intron 1 of 7) 29298 NM_001369479 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr15-2847 chr15 40848255 40848465 + 9.90 0.000 intron (NM_001032367, intron 1 of 9) L1ME4b|LINE|L1 -3836 NR_146468 102724362 Hs.569458 NR_146466 ENSG00000261183 SPINT1-AS1 - SPINT1 antisense RNA 1 ncRNA chr6-7986 chr6 115278579 115278789 + 9.90 0.000 Intergenic MER45C|DNA|hAT-Tip100 365151 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr6-2487 chr6 83867637 83867847 + 9.90 0.000 intron (NM_016230, intron 2 of 15) LTR18A|LTR|ERVL 8053 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding chrX-2958 chrX 155645161 155645371 + 9.90 0.000 intron (NM_001304990, intron 1 of 2) L1M1|LINE|L1 -32314 NM_018196 55217 Hs.133321 NM_018196 ENSG00000185973 TMLHE AUTSX6|BBOX2|TMLD|TMLH|TMLHED|XAP130 trimethyllysine hydroxylase, epsilon protein-coding chr8-1494 chr8 48377123 48377333 + 9.90 0.000 Intergenic Intergenic -174339 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr13-2209 chr13 22010828 22011038 + 9.90 0.000 Intergenic Intergenic -132773 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr16-2302 chr16 13307400 13307610 + 9.90 0.000 Intergenic Intergenic 405907 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr7-4611 chr7 23144818 23145028 + 9.90 0.000 intron (NM_001031710, intron 6 of 10) AluJr4|SINE|Alu -37125 NM_007342 11097 Hs.408241 NM_007342 ENSG00000136243 NUP42 CG1|NLP-1|NLP_1|NUPL2|hCG1 nucleoporin 42 protein-coding chr2-5594 chr2 176873515 176873725 + 9.90 0.000 Intergenic L1MA9|LINE|L1 235866 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chrX-4819 chrX 101881776 101881986 + 9.90 0.000 TTS (NM_001011657) TTS (NM_001011657) -24304 NR_159738 55998 Hs.307077 NM_032946 ENSG00000126952 NXF5 - nuclear RNA export factor 5 protein-coding chr11-6867 chr11 101521562 101521772 + 9.90 0.000 intron (NM_004621, intron 1 of 12) MSTA-int|LTR|ERVL-MaLR -1762 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr20-1607 chr20 9110573 9110783 + 9.90 0.000 intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) 41624 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr22-1188 chr22 46570524 46570734 + 9.90 0.000 Intergenic (CCTGC)n|Simple_repeat|Simple_repeat -6459 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr1-10503 chr1 165894725 165894935 + 9.90 0.000 intron (NM_012474, intron 3 of 6) intron (NM_012474, intron 3 of 6) -13091 NR_037431 100500832 NR_037431 ENSG00000283936 MIR3658 - microRNA 3658 ncRNA chr4-5316 chr4 181194247 181194457 + 9.90 0.000 Intergenic L2a|LINE|L2 -35203 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr1-10719 chr1 194574719 194574929 + 9.90 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 1270079 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr15-3916 chr15 33473258 33473468 + 9.90 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 162396 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chrX-2880 chrX 147389838 147390048 + 9.90 0.000 Intergenic L1PA13|LINE|L1 -105215 NR_030240 574518 NR_030240 ENSG00000207867 MIR514A3 MIR514-3|MIRN514-3|hsa-mir-514a-3 microRNA 514a-3 ncRNA chr8-2404 chr8 67462764 67462974 + 9.90 0.000 intron (NR_136224, intron 2 of 4) L2b|LINE|L2 119035 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr6-3733 chr6 5205682 5205892 + 9.90 0.000 intron (NM_001164840, intron 2 of 2) intron (NM_001164840, intron 2 of 2) 55163 NR_134856 57128 Hs.387755 NM_020408 ENSG00000214113 LYRM4 C6orf149|CGI-203|COXPD19|ISD11 LYR motif containing 4 protein-coding chr5-4841 chr5 62019557 62019767 + 9.90 0.000 Intergenic MSTB|LTR|ERVL-MaLR -283964 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr22-1430 chr22 44639199 44639409 + 9.90 0.000 Intergenic Intergenic -13885 NR_044991 414351 Hs.572878 NR_044991 LINC00229 C22orf10|NCRNA00229|dJ474I12.C22.2 long intergenic non-protein coding RNA 229 ncRNA chr2-7228 chr2 221398699 221398909 + 9.90 0.000 Intergenic Intergenic 173500 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr11-6755 chr11 83711336 83711546 + 9.90 0.000 intron (NM_001142699, intron 18 of 27) intron (NM_001142699, intron 18 of 27) -29016 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr3-11120 chr3 186588855 186589065 + 9.90 0.000 Intergenic L3|LINE|CR1 18284 NM_016306 51726 Hs.317192 NM_016306 ENSG00000090520 DNAJB11 ABBP-2|ABBP2|DJ9|Dj-9|EDJ|ERdj3|ERj3|ERj3p|PKD6|PRO1080|UNQ537 DnaJ heat shock protein family (Hsp40) member B11 protein-coding chr7-5969 chr7 101210516 101210726 + 9.90 0.000 exon (NM_001084, exon 13 of 19) exon (NM_001084, exon 13 of 19) 6960 NM_001084 8985 Hs.153357 NM_001084 ENSG00000106397 PLOD3 LH3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 protein-coding chrX-4664 chrX 81889649 81889859 + 9.90 0.000 Intergenic MSTA|LTR|ERVL-MaLR 687652 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr11-2291 chr11 35151129 35151339 + 9.90 0.000 intron (NM_001001389, intron 1 of 16) intron (NM_001001389, intron 1 of 16) -11716 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr2-6799 chr2 51995356 51995566 + 9.90 0.000 intron (NR_135237, intron 7 of 10) intron (NR_135237, intron 7 of 10) -375187 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr7-3006 chr7 45033747 45033957 + 9.90 0.000 intron (NM_001029835, intron 1 of 9) intron (NM_001029835, intron 1 of 9) 6218 NM_001029835 83605 Hs.148272 NM_031443 ENSG00000136280 CCM2 C7orf22|OSM|PP10187 CCM2 scaffold protein protein-coding chr6-5156 chr6 125760361 125760571 + 9.90 0.000 3' UTR (NM_012259, exon 5 of 5) 3' UTR (NM_012259, exon 5 of 5) 10834 NM_012259 23493 Hs.144287 NM_012259 ENSG00000135547 HEY2 CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32 hes related family bHLH transcription factor with YRPW motif 2 protein-coding chr7-3189 chr7 111972821 111973031 + 9.90 0.000 intron (NM_001363540, intron 8 of 52) L1PB1|LINE|L1 164421 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr10-1637 chr10 88800957 88801167 + 9.90 0.000 Intergenic Intergenic -1668 NM_001128215 340654 Hs.55118 NM_001128215 ENSG00000173239 LIPM LIPL3|bA304I5.1 lipase family member M protein-coding chr6-5138 chr6 123666654 123666864 + 9.90 0.000 Intergenic MER21C|LTR|ERVL -29666 NM_001256022 10345 Hs.144744 NM_006073 ENSG00000186439 TRDN CPVT5|TDN|TRISK triadin protein-coding chr5-926 chr5 176619258 176619468 + 9.90 0.000 TTS (NM_001318036) TTS (NM_001318036) -9207 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr13-4137 chr13 83656805 83657015 + 9.90 0.000 Intergenic Intergenic 225483 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr3-10407 chr3 130449197 130449407 + 9.90 0.000 intron (NM_001278298, intron 36 of 40) HERVK11-int|LTR|ERVK 103786 NR_022012 256076 Hs.205403 NM_153264 ENSG00000172752 COL6A5 COL29A1|VWA4 collagen type VI alpha 5 chain protein-coding chrX-2122 chrX 28697040 28697250 + 9.90 0.000 intron (NM_014271, intron 1 of 10) L1MC5a|LINE|L1 109699 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr5-7726 chr5 58949351 58949561 + 9.90 0.000 Intergenic L1M2|LINE|L1 50442 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr19-3167 chr19 39671965 39672175 + 9.90 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -7304 NR_034156 400696 Hs.456377 NM_207646 ENSG00000226025 LGALS17A - galectin 14 pseudogene pseudo chr1-16356 chr1 219909471 219909681 + 9.90 0.000 Intergenic Intergenic 19075 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr2-8316 chr2 106671966 106672176 + 9.90 0.000 Intergenic MSTA|LTR|ERVL-MaLR 184707 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr1-4565 chr1 85320858 85321068 + 9.90 0.000 3' UTR (NM_001330655, exon 6 of 6) 3' UTR (NM_001330655, exon 6 of 6) -44331 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr17-1521 chr17 64106538 64106748 + 9.90 0.000 intron (NM_001433, intron 1 of 21) intron (NM_001433, intron 1 of 21) 23501 NM_001433 2081 Hs.133982 NM_001433 ENSG00000178607 ERN1 IRE1|IRE1P|IRE1a|hIRE1p endoplasmic reticulum to nucleus signaling 1 protein-coding chr22-2194 chr22 46770577 46770787 + 9.90 0.000 intron (NR_104292, intron 2 of 13) intron (NR_104292, intron 2 of 13) -3245 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr1-3803 chr1 15671122 15671332 + 9.90 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR 11514 NM_006511 6248 Hs.239459 NM_006511 ENSG00000215695 RSC1A1 RS1 regulator of solute carriers 1 protein-coding chr3-4829 chr3 141412333 141412543 + 9.90 0.000 intron (NM_001080412, intron 7 of 7) intron (NM_001080412, intron 7 of 7) 10089 NM_001350100 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr14-1491 chr14 37786451 37786661 + 9.90 0.000 intron (NM_001368142, intron 1 of 12) L1PA7|LINE|L1 14173 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr16-4622 chr16 71552840 71553050 + 9.90 0.000 Intergenic L2|LINE|L2 -12071 NR_103852 100132529 Hs.710296 NR_103851 ENSG00000260886 TAT-AS1 - TAT antisense RNA 1 ncRNA chr2-6313 chr2 68103173 68103383 + 9.90 0.000 Intergenic Intergenic -40274 NM_173177 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding chrX-1016 chrX 48520374 48520584 + 9.90 0.000 3' UTR (NM_203474, exon 13 of 13) 3' UTR (NM_203474, exon 13 of 13) -1329 NM_006579 10682 Hs.30619 NM_006579 ENSG00000147155 EBP CDPX2|CHO2|CPX|CPXD|MEND EBP cholestenol delta-isomerase protein-coding chr16-2806 chr16 66358403 66358613 + 9.90 0.000 Intergenic MER5A|DNA|hAT-Charlie -8183 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr8-1789 chr8 93822457 93822667 + 9.90 0.000 Intergenic Intergenic 67668 NR_024522 91147 Hs.116240 NM_153704 ENSG00000164953 TMEM67 JBTS6|MECKELIN|MKS3|NPHP11|TNEM67 transmembrane protein 67 protein-coding chr3-4223 chr3 134747234 134747444 + 9.90 0.000 Intergenic L2b|LINE|L2 -47921 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr2-9832 chr2 154704775 154704985 + 9.90 0.000 intron (NM_001260508, intron 1 of 1) intron (NM_001260508, intron 1 of 1) 6185 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr2-9345 chr2 226623669 226623879 + 9.90 0.000 Intergenic Intergenic 35019 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr19-5358 chr19 5851928 5852138 + 9.90 0.000 promoter-TSS (NM_000149) promoter-TSS (NM_000149) -559 NM_000149 2525 Hs.169238 NM_000149 ENSG00000171124 FUT3 CD174|FT3B|FucT-III|LE|Les fucosyltransferase 3 (Lewis blood group) protein-coding chr1-7100 chr1 197775489 197775699 + 9.90 0.000 promoter-TSS (NM_001300858) promoter-TSS (NM_001300858) -114 NM_144977 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr15-1259 chr15 80317486 80317696 + 9.90 0.000 intron (NR_033833, intron 1 of 2) intron (NR_033833, intron 1 of 2) 24214 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA chr10-5606 chr10 93711901 93712111 + 9.90 0.000 Intergenic MER102b|DNA|hAT-Charlie -9047 NM_001347714 118924 Hs.586650 NM_145246 ENSG00000148690 FRA10AC1 C10orf4|F26C11.1-like|FRA10A FRA10A associated CGG repeat 1 protein-coding chr5-2378 chr5 87614742 87614952 + 9.90 0.000 Intergenic Intergenic -47195 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chrX-4520 chrX 66702176 66702386 + 9.90 0.000 Intergenic L1M2b|LINE|L1 -62983 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr2-12505 chr2 63756160 63756370 + 9.90 0.000 Intergenic Intergenic -84699 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr11-3538 chr11 14337205 14337415 + 9.90 0.000 intron (NM_001177314, intron 1 of 5) MER44D|DNA|TcMar-Tigger 21175 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr17-7573 chr17 20101255 20101465 + 9.90 0.000 intron (NM_001033553, intron 2 of 14) L1PA8|LINE|L1 14338 NM_152904 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr3-5524 chr3 197601292 197601502 + 9.90 0.000 Intergenic Intergenic 26484 NR_003266 220729 Hs.478854 NR_003266 ENSG00000214135 LOC220729 - succinate dehydrogenase complex flavoprotein subunit A pseudogene pseudo chr1-3952 chr1 111738297 111738507 + 9.90 0.000 intron (NM_198926, intron 1 of 1) intron (NM_198926, intron 1 of 1) 993 NM_019099 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr8-3425 chr8 74272227 74272437 + 9.90 0.000 intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 49029 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr3-7139 chr3 185065074 185065284 + 9.90 0.000 Intergenic Intergenic 87881 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr6-1812 chr6 138346804 138347014 + 9.90 0.000 Intergenic Intergenic -30734 NM_001368163 110806279 NM_001368163 ENSG00000262543 SMIM28 - small integral membrane protein 28 protein-coding chr11-3719 chr11 14257692 14257902 + 9.90 0.000 exon (NM_006108, exon 11 of 16) exon (NM_006108, exon 11 of 16) 100688 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr16-2306 chr16 19267741 19267951 + 9.90 0.000 3' UTR (NM_001330509, exon 8 of 8) 3' UTR (NM_001330509, exon 8 of 8) -17885 NM_001256720 728276 Hs.632180 NM_001256720 ENSG00000261210 CLEC19A - C-type lectin domain containing 19A protein-coding chr12-5118 chr12 96981236 96981446 + 9.90 0.000 Intergenic Intergenic 73875 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr10-5223 chr10 62961727 62961937 + 9.90 0.000 Intergenic Intergenic -142665 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chrX-1428 chrX 46960526 46960736 + 9.90 0.000 intron (NM_014735, intron 1 of 10) MER68|LTR|ERVL 48210 NM_014735 9767 Hs.371977 NM_014735 ENSG00000102221 JADE3 JADE-3|PHF16 jade family PHD finger 3 protein-coding chr5-3752 chr5 52983996 52984206 + 9.90 0.000 Intergenic Intergenic -5251 NR_073105 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr7-2923 chr7 134878323 134878533 + 9.90 0.000 intron (NM_033157, intron 3 of 14) AluSx1|SINE|Alu -12972 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr4-4596 chr4 76622142 76622352 + 9.90 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 46696 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr2-8112 chr2 78865048 78865258 + 9.90 0.000 Intergenic Intergenic -160549 NM_198448 130120 Hs.447084 NM_198448 ENSG00000143954 REG3G LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429 regenerating family member 3 gamma protein-coding chr13-2754 chr13 98541891 98542101 + 9.90 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) -19871 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr3-8671 chr3 180679758 180679968 + 9.90 0.000 promoter-TSS (NM_181426) promoter-TSS (NM_181426) -374 NM_181426 339829 Hs.712820 NM_181426 ENSG00000284862 CCDC39 CILD14|FAP59 coiled-coil domain containing 39 protein-coding chr12-4866 chr12 61495564 61495774 + 9.90 0.000 Intergenic AluY|SINE|Alu 697170 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chrX-975 chrX 139881523 139881733 + 9.90 0.000 intron (NM_001353812, intron 1 of 29) intron (NM_001353812, intron 1 of 29) 42603 NR_030230 574508 NR_030230 ENSG00000207633 MIR505 MIRN505|hsa-mir-505|mir-505 microRNA 505 ncRNA chr9-5821 chr9 129479071 129479281 + 9.90 0.000 Intergenic L3|LINE|CR1 -9484 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr4-3058 chr4 141040981 141041191 + 9.90 0.000 intron (NM_020724, intron 1 of 6) L2c|LINE|L2 92383 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr10-7038 chr10 79946989 79947199 + 9.90 0.000 intron (NM_003019, intron 1 of 7) intron (NM_003019, intron 1 of 7) 2011 NM_003019 6441 Hs.253495 NM_003019 ENSG00000133661 SFTPD COLEC7|PSP-D|SFTP4|SP-D surfactant protein D protein-coding chr17-5385 chr17 31863248 31863458 + 9.90 0.000 3' UTR (NM_018428, exon 19 of 19) 3' UTR (NM_018428, exon 19 of 19) -4109 NM_018405 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chrX-4509 chrX 65891030 65891240 + 9.90 0.000 Intergenic L1PA3|LINE|L1 -127735 NR_029637 407008 NR_029637 ENSG00000284567 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA chr8-6714 chr8 85559565 85559775 + 9.90 0.000 Intergenic L2a|LINE|L2 -94755 NR_121630 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA chr5-3385 chr5 141788161 141788371 + 9.90 0.000 Intergenic Intergenic 77936 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr17-2568 chr17 62893161 62893371 + 9.90 0.000 Intergenic Intergenic -50949 NR_030363 693218 NR_030363 ENSG00000207552 MIR633 MIRN633|hsa-mir-633 microRNA 633 ncRNA chr2-8318 chr2 107017951 107018161 + 9.90 0.000 Intergenic Intergenic -130947 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr11-5555 chr11 99679688 99679898 + 9.90 0.000 intron (NM_175566, intron 1 of 21) Tigger1|DNA|TcMar-Tigger 123648 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr21-512 chr21 34334840 34335050 + 9.90 0.000 Intergenic Intergenic -29079 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr1-9622 chr1 46160266 46160476 + 9.90 0.000 intron (NM_001303427, intron 1 of 9) intron (NM_001303427, intron 1 of 9) 14530 NM_001328648 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr1-5166 chr1 164748683 164748893 + 9.90 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 25853 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr9-2599 chr9 4261088 4261298 + 9.90 0.000 intron (NM_001042413, intron 2 of 10) intron (NM_001042413, intron 2 of 10) 38875 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr5-2533 chr5 169548386 169548596 + 9.90 0.000 Intergenic Intergenic -35282 NM_001329639 54908 Hs.368710 NM_017785 ENSG00000040275 SPDL1 CCDC99 spindle apparatus coiled-coil protein 1 protein-coding chr12-4006 chr12 26853902 26854112 + 9.90 0.000 Intergenic LTR81B|LTR|Gypsy -20813 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr2-5094 chr2 12303299 12303509 + 9.90 0.000 intron (NR_110196, intron 3 of 5) intron (NR_110196, intron 3 of 5) 104274 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr8-2941 chr8 27893640 27893850 + 9.90 0.000 intron (NM_173833, intron 7 of 8) intron (NM_173833, intron 7 of 8) -7629 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr9-4738 chr9 130072952 130073162 + 9.90 0.000 intron (NM_020960, intron 1 of 17) L1ME3A|LINE|L1 19151 NM_001136557 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chr22-2615 chr22 32303694 32303904 + 9.90 0.000 Intergenic L1MC1|LINE|L1 -48452 NM_014227 6527 Hs.130101 NM_014227 ENSG00000100191 SLC5A4 DJ90G24.4|SAAT1|SGLT3 solute carrier family 5 member 4 protein-coding chr16-2181 chr16 69763000 69763210 + 9.90 0.000 intron (NM_001270455, intron 1 of 8) intron (NM_001270455, intron 1 of 8) 773 NM_007014 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr16-2315 chr16 25034063 25034273 + 9.90 0.000 Intergenic AluJo|SINE|Alu 2427 NR_038379 554206 Hs.552959 NR_038379 ENSG00000262587 LOC554206 - leucine carboxyl methyltransferase 1 pseudogene pseudo chr5-2534 chr5 169630013 169630223 + 9.90 0.000 Intergenic Intergenic -7157 NR_156756 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr8-4499 chr8 119733328 119733538 + 9.90 0.000 intron (NM_003184, intron 25 of 25) MIR3|SINE|MIR -60043 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr19-6550 chr19 18988408 18988618 + 9.90 0.000 Intergenic Intergenic 45004 NR_147913 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr2-7604 chr2 26194558 26194768 + 9.90 0.000 intron (NM_000182, intron 15 of 19) intron (NM_000182, intron 15 of 19) 13947 NM_001191033 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr4-4892 chr4 119214931 119215141 + 9.90 0.000 intron (NM_001371395, intron 2 of 18) intron (NM_001371395, intron 2 of 18) 2323 NM_001371396 chr10-5574 chr10 89967305 89967515 + 9.90 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -10037 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr14-1767 chr14 91858744 91858954 + 9.90 0.000 intron (NM_001128596, intron 1 of 11) intron (NM_001128596, intron 1 of 11) 8687 NM_001128596 123036 Hs.510262 NM_152332 ENSG00000165929 TC2N C14orf47|C2CD1|MTAC2D1|Tac2-N tandem C2 domains, nuclear protein-coding chr20-2716 chr20 48452669 48452879 + 9.90 0.000 Intergenic Intergenic 92863 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr2-3706 chr2 221299629 221299839 + 9.90 0.000 Intergenic Intergenic 272570 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr2-11405 chr2 218464032 218464242 + 9.90 0.000 intron (NM_020935, intron 21 of 25) AluSc|SINE|Alu 45014 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding chr1-9302 chr1 26747725 26747935 + 9.90 0.000 intron (NM_139135, intron 4 of 19) AluJr|SINE|Alu -40133 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr9-4541 chr9 78919243 78919453 + 9.90 0.000 Intergenic MER89|LTR|ERV1 226318 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr22-1391 chr22 37971248 37971458 + 9.90 0.000 TTS (NM_006941) TTS (NM_006941) 3790 NR_106878 102465492 NR_106878 ENSG00000284289 MIR6820 hsa-mir-6820 microRNA 6820 ncRNA chr18-2076 chr18 48472768 48472978 + 9.90 0.000 Intergenic MLT1B-int|LTR|ERVL-MaLR -60288 NM_001371287 chr20-2106 chr20 31545732 31545942 + 9.90 0.000 intron (NM_178580, intron 4 of 12) AluSz6|SINE|Alu 27426 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr1-8718 chr1 229629579 229629789 + 9.90 0.000 intron (NM_014777, intron 2 of 9) Tigger1|DNA|TcMar-Tigger 3437 NM_014777 9816 Hs.533628 NM_014777 ENSG00000135763 URB2 KIAA0133|NET10|NPA2 URB2 ribosome biogenesis homolog protein-coding chr1-7665 chr1 14096144 14096354 + 9.90 0.000 Intergenic Intergenic 323724 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr13-3780 chr13 44584892 44585102 + 9.90 0.000 Intergenic Intergenic -8432 NM_001243799 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chr13-1212 chr13 59906555 59906765 + 9.90 0.000 intron (NM_001258369, intron 20 of 26) intron (NM_001258369, intron 20 of 26) -106058 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr17-8079 chr17 54734888 54735098 + 9.90 0.000 Intergenic LTR9A1|LTR|ERV1 -165698 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr13-307 chr13 98142958 98143168 + 9.90 0.000 promoter-TSS (NM_001001715) promoter-TSS (NM_001001715) -31 NM_001001715 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, ARH/RhoGEF and pleckstrin domain protein 1 protein-coding chr11-7005 chr11 117546089 117546299 + 9.90 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 218340 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr8-2746 chr8 106816090 106816300 + 9.90 0.000 Intergenic MLT2B2|LTR|ERVL -45951 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr8-2840 chr8 130448922 130449132 + 9.90 0.000 Intergenic Intergenic -5353 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr7-4464 chr7 134602773 134602983 + 9.90 0.000 Intergenic Intergenic -43901 NM_199186 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr2-6972 chr2 127859876 127860086 + 9.90 0.000 Intergenic Intergenic -1826 NM_004805 5433 Hs.715348 NM_004805 ENSG00000144231 POLR2D HSRBP4|HSRPB4|RBP4|RPB16 RNA polymerase II subunit D protein-coding chr12-6542 chr12 114374541 114374751 + 9.90 0.000 intron (NM_000192, intron 7 of 8) L1ME2z|LINE|L1 31498 NM_181486 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box transcription factor 5 protein-coding chr9-2945 chr9 136518489 136518699 + 9.90 0.000 TTS (NR_039820) TTS (NR_039820) 1032 NR_039820 100616242 NR_039820 ENSG00000263403 MIR4673 - microRNA 4673 ncRNA chr5-4691 chr5 39363352 39363562 + 9.90 0.000 intron (NM_001737, intron 1 of 10) intron (NM_001737, intron 1 of 10) 1038 NM_001737 735 Hs.654443 NM_001737 ENSG00000113600 C9 ARMD15|C9D complement C9 protein-coding chr16-2323 chr16 29269365 29269575 + 9.90 0.000 Intergenic Intergenic -32817 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr5-8766 chr5 147788512 147788722 + 9.90 0.000 Intergenic L2a|LINE|L2 -5889 NM_001270934 9832 Hs.740461 NM_014790 ENSG00000176049 JAKMIP2 JAMIP2|NECC1 janus kinase and microtubule interacting protein 2 protein-coding chr2-13138 chr2 118259599 118259809 + 9.90 0.000 Intergenic L1ME1|LINE|L1 -73318 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chrX-1986 chrX 12410223 12410433 + 9.90 0.000 intron (NM_001368402, intron 2 of 17) L1ME5|LINE|L1 -88352 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr5-3539 chr5 26579446 26579656 + 9.90 0.000 Intergenic Tigger4|DNA|TcMar-Tigger 459035 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chrX-4241 chrX 38924132 38924342 + 9.90 0.000 Intergenic Intergenic -120354 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr5-4966 chr5 78666151 78666361 + 9.90 0.000 Intergenic Intergenic -17484 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr2-3789 chr2 12928374 12928584 + 9.90 0.000 Intergenic Intergenic 78534 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr10-7081 chr10 91050026 91050236 + 9.90 0.000 intron (NR_047467, intron 3 of 3) intron (NR_047467, intron 3 of 3) 4323 NR_047467 100874184 Hs.512240 NR_047467 LINC00502 - long intergenic non-protein coding RNA 502 ncRNA chr2-11584 chr2 1809322 1809532 + 9.90 0.000 intron (NM_015025, intron 21 of 24) intron (NM_015025, intron 21 of 24) -64912 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr15-1399 chr15 41558258 41558468 + 9.90 0.000 promoter-TSS (NM_006293) promoter-TSS (NM_006293) -849 NM_006293 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr3-2706 chr3 64300749 64300959 + 9.90 0.000 Intergenic L1MB7|LINE|L1 -32681 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chrX-2569 chrX 102773547 102773757 + 9.90 0.000 intron (NR_038988, intron 2 of 7) L1PA4|LINE|L1 4499 NR_146592 100287765 Hs.556850 NR_038988 LINC00630 - long intergenic non-protein coding RNA 630 ncRNA chr4-2557 chr4 83113062 83113272 + 9.90 0.000 intron (NM_001130715, intron 1 of 3) intron (NM_001130715, intron 1 of 3) 1562 NM_016619 51316 Hs.546392 NM_016619 ENSG00000145287 PLAC8 C15|DGIC|PNAS-144|onzin placenta associated 8 protein-coding chr16-4909 chr16 89277658 89277868 + 9.90 0.000 intron (NM_001256182, intron 10 of 13) intron (NM_001256182, intron 10 of 13) -18365 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr9-3284 chr9 63702628 63702838 + 9.90 0.000 Intergenic L1PA17|LINE|L1 -110208 NR_146625 203274 Hs.599821 NR_146625 LINC00537 - long intergenic non-protein coding RNA 537 ncRNA chr16-2216 chr16 87203130 87203340 + 9.90 0.000 Intergenic L1MD2|LINE|L1 -8880 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr12-2218 chr12 49792555 49792765 + 9.90 0.000 intron (NM_001037806, intron 11 of 12) intron (NM_001037806, intron 11 of 12) 35753 NM_001368048 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L Cep169|FP1193|KIAA1602 NCK associated protein 5 like protein-coding chr2-12435 chr2 57863034 57863244 + 9.90 0.000 Intergenic Intergenic -44512 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr1-9319 chr1 27284550 27284760 + 9.90 0.000 intron (NM_001276252, intron 5 of 15) intron (NM_001276252, intron 5 of 15) -37490 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding chr2-12881 chr2 98219697 98219907 + 9.90 0.000 intron (NR_144297, intron 14 of 18) L1MEc|LINE|L1 70269 NM_001345864 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr16-1512 chr16 28936599 28936809 + 9.90 0.000 intron (NM_001178098, intron 7 of 14) CpG 4733 NM_001178098 930 Hs.652262 NM_001770 ENSG00000177455 CD19 B4|CVID3 CD19 molecule protein-coding chr8-4201 chr8 84812515 84812725 + 9.90 0.000 intron (NM_001287244, intron 3 of 7) L1PB1|LINE|L1 106693 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr12-7314 chr12 54221683 54221893 + 9.90 0.000 Intergenic Intergenic 9688 NR_039851 100616400 NR_039851 ENSG00000283803 MIR3198-2 mir-3198-2 microRNA 3198-2 ncRNA chr1-9195 chr1 21716233 21716443 + 9.90 0.000 intron (NM_001350167, intron 14 of 26) MER44C|DNA|TcMar-Tigger -46981 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr14-3088 chr14 64228945 64229155 + 9.90 0.000 intron (NM_001271876, intron 7 of 7) intron (NM_001271876, intron 7 of 7) 13096 NM_182910 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr12-5014 chr12 82829638 82829848 + 9.90 0.000 intron (NM_001320321, intron 1 of 10) L2c|LINE|L2 142588 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr15-1849 chr15 52019113 52019323 + 9.90 0.000 promoter-TSS (NM_002748) promoter-TSS (NM_002748) -1 NM_002748 5597 Hs.411847 NM_002748 ENSG00000069956 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding chr3-10790 chr3 159322199 159322409 + 9.90 0.000 intron (NM_001197108, intron 1 of 6) L2a|LINE|L2 39658 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr20-2253 chr20 2631271 2631481 + 9.90 0.000 intron (NM_080751, intron 17 of 19) L1M4|LINE|L1 -21256 NR_027700 10528 Hs.376064 NM_006392 ENSG00000101361 NOP56 NOL5A|SCA36 NOP56 ribonucleoprotein protein-coding chr12-6981 chr12 29468883 29469093 + 9.90 0.000 intron (NM_001353179, intron 16 of 25) L1MC3|LINE|L1 30705 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding chr2-13889 chr2 180291123 180291333 + 9.90 0.000 Intergenic Intergenic -283931 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr10-5655 chr10 97517745 97517955 + 9.90 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) 18926 NM_024954 80019 Hs.500724 NM_024954 ENSG00000165886 UBTD1 - ubiquitin domain containing 1 protein-coding chr3-2918 chr3 52368760 52368970 + 9.90 0.000 exon (NM_015512, exon 37 of 78) exon (NM_015512, exon 37 of 78) 41143 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr5-5702 chr5 165397659 165397869 + 9.90 0.000 Intergenic Intergenic 927485 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr13-926 chr13 74770301 74770511 + 9.90 0.000 Intergenic Intergenic 217563 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chrX-5123 chrX 129472087 129472297 + 9.90 0.000 intron (NM_003069, intron 19 of 24) intron (NM_003069, intron 19 of 24) 51298 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr6-1067 chr6 23659169 23659379 + 9.90 0.000 Intergenic Intergenic -466941 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr4-2293 chr4 20604187 20604397 + 9.90 0.000 intron (NM_001289135, intron 32 of 35) intron (NM_001289135, intron 32 of 35) 76017 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr3-3847 chr3 33131542 33131752 + 9.90 0.000 intron (NM_006371, intron 4 of 6) intron (NM_006371, intron 4 of 6) 17689 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr20-4461 chr20 62362892 62363102 + 9.90 0.000 intron (NM_005560, intron 1 of 79) L2b|LINE|L2 4315 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr8-2765 chr8 116560053 116560263 + 9.90 0.000 Intergenic Intergenic -91942 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr1-7083 chr1 187743270 187743480 + 9.90 0.000 Intergenic L1MA9|LINE|L1 299747 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr6-3551 chr6 44329371 44329581 + 9.90 0.000 Intergenic L2c|LINE|L2 -13184 NM_145026 221409 Hs.135283 NM_145026 ENSG00000249481 SPATS1 DDIP|SPATA8|SRSP1 spermatogenesis associated serine rich 1 protein-coding chr2-3761 chr2 8488242 8488452 + 9.90 0.000 Intergenic Intergenic 95445 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr16-4504 chr16 57947069 57947279 + 9.90 0.000 intron (NM_001297, intron 14 of 32) intron (NM_001297, intron 14 of 32) 23954 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr17-2737 chr17 77879490 77879700 + 9.90 0.000 non-coding (NR_028337, exon 2 of 2) non-coding (NR_028337, exon 2 of 2) 4492 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr15-1965 chr15 38930859 38931069 + 9.90 0.000 Intergenic L1PA15|LINE|L1 234366 NR_160786 chr15-2327 chr15 91118391 91118601 + 9.90 0.000 intron (NM_001323039, intron 1 of 12) intron (NM_001323039, intron 1 of 12) 16700 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr15-1598 chr15 77820366 77820576 + 9.90 0.000 promoter-TSS (NM_001301189) promoter-TSS (NM_001301189) -139 NM_001301187 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr3-5629 chr3 10533708 10533918 + 9.90 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) -28227 NM_001683 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr22-2572 chr22 28410485 28410695 + 9.90 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -49279 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr6-7897 chr6 108398634 108398844 + 9.90 0.000 intron (NR_136553, intron 3 of 8) L1MA2|LINE|L1 103685 NR_136553 246269 Hs.259666 NM_145315 ENSG00000135537 AFG1L AFG1|LACE1|c222389 AFG1 like ATPase protein-coding chr11-5355 chr11 64403933 64404143 + 9.90 0.000 Intergenic LTR50|LTR|ERVL 35436 NR_031602 100302280 NR_031602 ENSG00000221273 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA chr14-2383 chr14 44113309 44113519 + 9.90 0.000 Intergenic Intergenic 393869 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr21-1753 chr21 35205317 35205527 + 9.90 0.000 Intergenic Intergenic -156124 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr2-11279 chr2 182324600 182324810 + 9.90 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) -82642 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr2-5513 chr2 149069503 149069713 + 9.90 0.000 intron (NM_001317006, intron 1 of 4) intron (NM_001317006, intron 1 of 4) -7914 NM_001317004 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr1-5040 chr1 86085020 86085230 + 9.90 0.000 intron (NM_152890, intron 7 of 59) intron (NM_152890, intron 7 of 59) 71346 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr9-2526 chr9 122219265 122219475 + 9.90 0.000 intron (NM_199160, intron 4 of 8) CpG 2370 NM_001242335 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr10-1969 chr10 30842945 30843155 + 9.90 0.000 Intergenic Intergenic 119831 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr18-693 chr18 21117784 21117994 + 9.90 0.000 Intergenic Intergenic -6076 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr12-3131 chr12 38745389 38745599 + 9.90 0.000 intron (NM_153634, intron 10 of 19) intron (NM_153634, intron 10 of 19) 160097 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr9-1514 chr9 88980630 88980840 + 9.90 0.000 Intergenic L1MD2|LINE|L1 -10128 NM_001001938 286223 Hs.585118 NM_001001938 ENSG00000213694 C9orf47 C9orf108|bA791O21.3 chromosome 9 open reading frame 47 protein-coding chr3-8113 chr3 18698964 18699174 + 9.90 0.000 Intergenic MSTB|LTR|ERVL-MaLR -253477 NM_001322872 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr17-2272 chr17 21689705 21689915 + 9.90 0.000 Intergenic Intergenic -2713 NM_001194958 100134444 Hs.200629 NM_001194958 ENSG00000260458 KCNJ18 KIR2.6|TTPP2 potassium voltage-gated channel subfamily J member 18 protein-coding chr7-3683 chr7 47863194 47863404 + 9.90 0.000 intron (NM_138295, intron 26 of 56) L2a|LINE|L2 68008 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr3-5686 chr3 13644292 13644502 + 9.90 0.000 Intergenic Intergenic -6324 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr8-1511 chr8 68970724 68970934 + 9.90 0.000 intron (NR_039986, intron 2 of 4) MLT1F1|LTR|ERVL-MaLR 133361 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr15-667 chr15 68578435 68578645 + 9.90 0.000 promoter-TSS (NM_006091) promoter-TSS (NM_006091) -453 NM_006091 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr1-7382 chr1 27127407 27127617 + 9.90 0.000 intron (NM_003047, intron 1 of 11) MIRc|SINE|MIR 27613 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr5-2528 chr5 167447776 167447986 + 9.90 0.000 intron (NM_001122679, intron 3 of 29) intron (NM_001122679, intron 3 of 29) -125778 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr8-4039 chr8 61192932 61193142 + 9.90 0.000 Intergenic L1PA5|LINE|L1 -94933 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr11-2935 chr11 70763551 70763761 + 9.90 0.000 intron (NM_012309, intron 13 of 24) intron (NM_012309, intron 13 of 24) -99134 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA chr1-8272 chr1 37353753 37353963 + 9.90 0.000 Intergenic Kanga2_a|DNA|TcMar-Tc2 120585 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr11-5475 chr11 76171787 76171997 + 9.90 0.000 Intergenic Intergenic 34610 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr8-1066 chr8 85107192 85107402 + 9.90 0.000 promoter-TSS (NM_001349638) promoter-TSS (NM_001349638) 59 NM_001349639 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chr11-7077 chr11 121326784 121326994 + 9.90 0.000 Intergenic MIRb|SINE|MIR 34021 NM_001024956 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr10-8681 chr10 101097919 101098129 + 9.90 0.000 intron (NR_130723, intron 2 of 2) intron (NR_130723, intron 2 of 2) 31725 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr12-2100 chr12 50928563 50928773 + 9.90 0.000 intron (NM_014033, intron 1 of 1) MER61D|LTR|ERV1 3653 NM_014033 25840 Hs.711113 NM_014033 ENSG00000185432 METTL7A AAM-B|AAMB methyltransferase like 7A protein-coding chr1-4821 chr1 22653836 22654046 + 9.90 0.000 intron (NM_000491, intron 1 of 2) intron (NM_000491, intron 1 of 2) 705 NM_000491 713 Hs.8986 NM_000491 ENSG00000173369 C1QB - complement C1q B chain protein-coding chr9-1999 chr9 127957894 127958104 + 9.90 0.000 intron (NM_001035254, intron 1 of 10) AluSz6|SINE|Alu -7285 NM_203305 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chrX-2009 chrX 14920312 14920522 + 9.90 0.000 3' UTR (NM_001177475, exon 14 of 14) 3' UTR (NM_001177475, exon 14 of 14) 35126 NM_001177475 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr13-1735 chr13 103179421 103179631 + 9.90 0.000 Intergenic Intergenic -113109 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr7-6026 chr7 107719252 107719462 + 9.90 0.000 Intergenic L2a|LINE|L2 24275 NR_144536 101927974 Hs.432792 NR_144536 ENSG00000241764 LOC101927974 - uncharacterized LOC101927974 ncRNA chr8-2428 chr8 100307610 100307820 + 9.90 0.000 intron (NM_001280539, intron 2 of 10) intron (NM_001280539, intron 2 of 10) 1660 NM_001353838 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr1-12615 chr1 37754175 37754385 + 9.90 0.000 exon (NM_001099439, exon 4 of 17) exon (NM_001099439, exon 4 of 17) 10840 NM_001099439 284656 Hs.129435 NM_173641 ENSG00000183317 EPHA10 - EPH receptor A10 protein-coding chr13-2470 chr13 50731445 50731655 + 9.90 0.000 intron (NM_198989, intron 1 of 1) intron (NM_198989, intron 1 of 1) -76305 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr4-5451 chr4 28072065 28072275 + 9.90 0.000 Intergenic L1PB4|LINE|L1 -747412 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr11-6114 chr11 37078240 37078450 + 9.90 0.000 Intergenic MER106A|DNA|hAT-Charlie -480066 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr20-1640 chr20 19699653 19699863 + 9.90 0.000 intron (NM_020689, intron 15 of 16) MER68|LTR|ERVL -186763 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr6-6935 chr6 15727923 15728133 + 9.90 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -64970 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr1-7525 chr1 164344569 164344779 + 9.90 0.000 Intergenic Intergenic -214686 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr12-4609 chr12 39952321 39952531 + 9.90 0.000 intron (NM_052885, intron 3 of 9) intron (NM_052885, intron 3 of 9) 153655 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr12-7093 chr12 44404565 44404775 + 9.90 0.000 Intergenic (AATG)n|Simple_repeat|Simple_repeat 470991 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr16-4523 chr16 61687824 61688034 + 9.90 0.000 intron (NM_001796, intron 10 of 11) intron (NM_001796, intron 10 of 11) 348509 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr15-2997 chr15 54590583 54590793 + 9.90 0.000 intron (NM_001329919, intron 29 of 31) L1PB1|LINE|L1 -466059 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr3-2711 chr3 73604022 73604232 + 9.90 0.000 intron (NM_015009, intron 2 of 9) intron (NM_015009, intron 2 of 9) -19441 NR_046681 101927249 Hs.733334 NR_046681 PDZRN3-AS1 - PDZRN3 antisense RNA 1 ncRNA chr12-5049 chr12 88753060 88753270 + 9.90 0.000 Intergenic L2c|LINE|L2 -172692 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr20-1598 chr20 5157078 5157288 + 9.90 0.000 intron (NM_003818, intron 1 of 12) intron (NM_003818, intron 1 of 12) 30175 NM_003818 8760 Hs.126857 NM_003818 ENSG00000101290 CDS2 - CDP-diacylglycerol synthase 2 protein-coding chr13-2696 chr13 90705651 90705861 + 9.90 0.000 Intergenic L1MA10|LINE|L1 212468 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr3-6341 chr3 81463878 81464088 + 9.90 0.000 Intergenic Intergenic 297662 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr6-2320 chr6 111737280 111737490 + 9.90 0.000 intron (NM_153047, intron 3 of 13) MER21B|LTR|ERVL 21746 NM_153048 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr3-2726 chr3 111904618 111904828 + 9.90 0.000 intron (NM_001134437, intron 3 of 17) intron (NM_001134437, intron 3 of 17) 44896 NM_001134439 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr12-4872 chr12 62669475 62669685 + 9.90 0.000 intron (NM_020700, intron 8 of 9) intron (NM_020700, intron 8 of 9) 65894 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr2-13874 chr2 179266312 179266522 + 9.90 0.000 Intergenic Intergenic -1585 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr6-6802 chr6 5470968 5471178 + 9.90 0.000 intron (NM_006567, intron 4 of 6) intron (NM_006567, intron 4 of 6) -12998 NR_125847 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA chr2-9785 chr2 113081867 113082077 + 9.90 0.000 Intergenic Intergenic 9654 NM_032556 84639 Hs.306974 NM_032556 ENSG00000136697 IL1F10 FIL1-theta|FKSG75|IL-1HY2|IL-38|IL1-theta|IL1HY2 interleukin 1 family member 10 protein-coding chr4-2172 chr4 101126126 101126336 + 9.90 0.000 intron (NM_001130691, intron 2 of 12) intron (NM_001130691, intron 2 of 12) 114641 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr1-9547 chr1 40305413 40305623 + 9.90 0.000 intron (NM_001852, intron 21 of 31) intron (NM_001852, intron 21 of 31) 11768 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr4-2485 chr4 8517092 8517302 + 9.90 0.000 Intergenic Intergenic -63040 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr10-5184 chr10 59621486 59621696 + 9.90 0.000 Intergenic Intergenic 88300 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr4-3107 chr4 156638873 156639083 + 9.90 0.000 Intergenic L2c|LINE|L2 332821 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr1-5473 chr1 100708692 100708902 + 9.90 0.000 Intergenic Intergenic -10843 NM_001199834 7412 Hs.109225 NM_001078 ENSG00000162692 VCAM1 CD106|INCAM-100 vascular cell adhesion molecule 1 protein-coding chr4-6766 chr4 6538830 6539040 + 9.90 0.000 intron (NM_001206994, intron 1 of 9) intron (NM_001206994, intron 1 of 9) 16680 NM_001206995 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr9-5028 chr9 27783430 27783640 + 9.90 0.000 Intergenic L1PA7|LINE|L1 -209669 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr11-4566 chr11 125295197 125295407 + 9.90 0.000 intron (NM_022062, intron 2 of 12) L2|LINE|L2 130551 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr6-5193 chr6 131313058 131313268 + 9.90 0.000 Intergenic MER5A1|DNA|hAT-Charlie 62759 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr6-3598 chr6 89483096 89483306 + 9.90 0.000 intron (NM_001242809, intron 1 of 15) intron (NM_001242809, intron 1 of 15) 50023 NM_014942 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr4-7356 chr4 57762271 57762481 + 9.90 0.000 Intergenic AluSz|SINE|Alu 336504 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr18-1167 chr18 13712614 13712824 + 9.90 0.000 intron (NM_001098801, intron 1 of 4) MLT1A0|LTR|ERVL-MaLR 13839 NM_001098801 125228 Hs.13034 NM_152352 ENSG00000177150 FAM210A C18orf19|HsT2329 family with sequence similarity 210 member A protein-coding chr17-6216 chr17 8748862 8749072 + 9.90 0.000 intron (NM_001128076, intron 6 of 6) LTR101_Mam|LTR|ERVL -4131 NM_001158261 146849 Hs.121438 NM_144681 ENSG00000161973 CCDC42 CCDC42A coiled-coil domain containing 42 protein-coding chr1-10640 chr1 181389332 181389542 + 9.90 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -94080 NM_000721 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr12-7427 chr12 59814486 59814696 + 9.90 0.000 Intergenic Intergenic 125221 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr6-2973 chr6 38730083 38730293 + 9.90 0.000 intron (NM_001206927, intron 4 of 92) intron (NM_001206927, intron 4 of 92) 14877 NM_001371 1769 Hs.520106 NM_001371 ENSG00000124721 DNAH8 ATPase|hdhc9 dynein axonemal heavy chain 8 protein-coding chr21-1040 chr21 25857420 25857630 + 9.90 0.000 Intergenic Intergenic -121871 NM_001003703 522 Hs.246310 NM_001685 ENSG00000154723 ATP5PF ATP5|ATP5A|ATP5J|ATPM|CF6|F6 ATP synthase peripheral stalk subunit F6 protein-coding chr12-1460 chr12 243834 244044 + 9.90 0.000 intron (NM_016615, intron 2 of 14) intron (NM_016615, intron 2 of 14) 13360 NR_120482 102723544 Hs.669733 NR_120482 ENSG00000255746 LOC102723544 - uncharacterized LOC102723544 ncRNA chr5-6676 chr5 60799964 60800174 + 9.90 0.000 intron (NM_024930, intron 1 of 8) L1M3|LINE|L1 44200 NM_024930 79993 Hs.274256 NM_024930 ENSG00000164181 ELOVL7 - ELOVL fatty acid elongase 7 protein-coding chr16-3565 chr16 60925787 60925997 + 9.90 0.000 Intergenic Intergenic 129874 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr16-4253 chr16 22785867 22786077 + 9.90 0.000 Intergenic Intergenic -28190 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr7-5273 chr7 22325234 22325444 + 9.90 0.000 intron (NM_012294, intron 1 of 25) intron (NM_012294, intron 1 of 25) 31815 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr11-6162 chr11 44274330 44274540 + 9.90 0.000 intron (NM_021926, intron 2 of 3) (TTGTG)n|Simple_repeat|Simple_repeat 35704 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chrX-1274 chrX 109485681 109485891 + 9.90 0.000 Intergenic Intergenic -3700 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr9-2093 chr9 84773159 84773369 + 9.90 0.000 intron (NM_001369547, intron 13 of 13) L2a|LINE|L2 67363 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr20-1932 chr20 15476335 15476545 + 9.90 0.000 intron (NM_001351663, intron 7 of 17) Kanga1|DNA|TcMar-Tc2 279600 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chrX-2326 chrX 56248557 56248767 + 9.90 0.000 intron (NM_001324099, intron 1 of 3) intron (NM_001324099, intron 1 of 3) 15504 NM_001324099 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr19-2411 chr19 28468897 28469107 + 9.90 0.000 intron (NR_110759, intron 5 of 9) intron (NR_110759, intron 5 of 9) -137686 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr1-9365 chr1 29806855 29807065 + 9.90 0.000 Intergenic Intergenic 230652 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chrX-780 chrX 44273692 44273902 + 9.90 0.000 intron (NM_025184, intron 2 of 14) intron (NM_025184, intron 2 of 14) 69875 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr18-1988 chr18 40143575 40143785 + 9.90 0.000 Intergenic Intergenic 77394 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr19-2819 chr19 50912778 50912988 + 9.90 0.000 Intergenic CpG -2145 NM_001302961 9622 Hs.218366 NM_004917 ENSG00000167749 KLK4 AI2A1|ARM1|EMSP|EMSP1|KLK-L1|PRSS17|PSTS|kallikrein kallikrein related peptidase 4 protein-coding chr5-4492 chr5 10111656 10111866 + 9.90 0.000 Intergenic L1MC4|LINE|L1 138127 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr17-5947 chr17 76232518 76232728 + 9.90 0.000 intron (NM_052916, intron 1 of 18) L1ME1|LINE|L1 7870 NM_052916 114804 Hs.500643 NM_052916 ENSG00000141576 RNF157 - ring finger protein 157 protein-coding chr12-3450 chr12 115476098 115476308 + 9.90 0.000 Intergenic Intergenic 672451 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr2-10616 chr2 8851485 8851695 + 9.90 0.000 Intergenic L1ME3Cz|LINE|L1 -13977 NM_001348731 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr13-1597 chr13 42864663 42864873 + 9.90 0.000 intron (NR_126388, intron 1 of 2) intron (NR_126388, intron 1 of 2) 7976 NR_126389 104355147 Hs.633967 NR_126388 LINC00428 - long intergenic non-protein coding RNA 428 ncRNA chr13-1190 chr13 47480112 47480322 + 9.90 0.000 Intergenic Intergenic 452405 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr10-7167 chr10 103791359 103791569 + 9.90 0.000 intron (NM_014631, intron 2 of 13) intron (NM_014631, intron 2 of 13) 44685 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr4-7427 chr4 66640418 66640628 + 9.90 0.000 Intergenic Intergenic 363699 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr11-3370 chr11 124836837 124837047 + 9.90 0.000 Intergenic AluY|SINE|Alu -28490 NM_022370 64221 Hs.435621 NM_022370 ENSG00000154134 ROBO3 HGPPS|HGPPS1|HGPS|RBIG1|RIG1 roundabout guidance receptor 3 protein-coding chr21-577 chr21 46524011 46524221 + 9.90 0.000 intron (NM_001146115, intron 7 of 19) MER41-int|LTR|ERV1 61645 NR_046400 100862692 Hs.737163 NR_046400 ENSG00000223692 DIP2A-IT1 - DIP2A intronic transcript 1 ncRNA chr1-6096 chr1 119221181 119221391 + 9.90 0.000 intron (NR_125975, intron 4 of 6) intron (NR_125975, intron 4 of 6) -80614 NM_015836 10352 Hs.523506 NM_015836 ENSG00000116874 WARS2 NEMMLAS|TrpRS|mtTrpRS tryptophanyl tRNA synthetase 2, mitochondrial protein-coding chr7-7171 chr7 6038276 6038486 + 9.90 0.000 intron (NM_001134335, intron 10 of 14) AluJr|SINE|Alu 7005 NM_001271700 100310846 Hs.744468 NM_001271700 ENSG00000157999 ANKRD61 - ankyrin repeat domain 61 protein-coding chr5-4603 chr5 31510165 31510375 + 9.90 0.000 intron (NM_013235, intron 8 of 34) MIR|SINE|MIR 21823 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr10-3794 chr10 129730396 129730606 + 9.90 0.000 intron (NM_002412, intron 3 of 4) intron (NM_002412, intron 3 of 4) 112873 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr19-2748 chr19 40347796 40348006 + 9.90 0.000 promoter-TSS (NM_012268) promoter-TSS (NM_012268) 496 NR_046202 126526 Hs.631557 NM_178830 ENSG00000160392 C19orf47 - chromosome 19 open reading frame 47 protein-coding chr3-10568 chr3 141432490 141432700 + 9.90 0.000 intron (NM_001350099, intron 4 of 5) intron (NM_001350099, intron 4 of 5) 30246 NM_001350100 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr13-3994 chr13 67641983 67642193 + 9.90 0.000 Intergenic Intergenic 269701 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr9-7442 chr9 25951637 25951847 + 9.90 0.000 Intergenic L1MA1|LINE|L1 -114933 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr11-5033 chr11 85236441 85236651 + 9.90 0.000 intron (NM_001142699, intron 4 of 27) MLT1B|LTR|ERVL-MaLR -313125 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr2-9247 chr2 219183420 219183630 + 9.90 0.000 3' UTR (NM_001321110, exon 9 of 9) 3' UTR (NM_001321110, exon 9 of 9) 4816 NM_001321110 79137 Hs.516707 NM_024293 ENSG00000144567 RETREG2 C2orf17|FAM134A|MAG-2 reticulophagy regulator family member 2 protein-coding chr9-891 chr9 129550208 129550418 + 9.90 0.000 Intergenic CpG -58571 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr10-2389 chr10 110860138 110860348 + 9.90 0.000 Intergenic Intergenic 10661 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr7-2516 chr7 44533462 44533672 + 9.90 0.000 intron (NM_001300967, intron 6 of 6) intron (NM_001300967, intron 6 of 6) 7763 NM_001300967 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr1-10967 chr1 214158382 214158592 + 9.90 0.000 Intergenic HAL1|LINE|L1 -122672 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr4-8570 chr4 167562856 167563066 + 9.90 0.000 Intergenic L1PA13|LINE|L1 -328371 NM_001251967 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr1-7125 chr1 202716663 202716873 + 9.90 0.000 Intergenic L2c|LINE|L2 -6314 NM_177402 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr15-1898 chr15 75718486 75718696 + 9.90 0.000 Intergenic Intergenic -5450 NM_175881 161753 Hs.144348 NM_175881 ENSG00000182950 ODF3L1 - outer dense fiber of sperm tails 3 like 1 protein-coding chr15-1249 chr15 77702565 77702775 + 9.90 0.000 intron (NM_001301192, intron 2 of 4) intron (NM_001301192, intron 2 of 4) 4837 NM_001301198 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr16-4495 chr16 57646531 57646741 + 9.90 0.000 intron (NM_001370454, intron 2 of 13) intron (NM_001370454, intron 2 of 13) 7144 NM_001145774 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr2-4500 chr2 18976687 18976897 + 9.90 0.000 Intergenic Intergenic 50179 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr6-7966 chr6 112931985 112932195 + 9.90 0.000 Intergenic Intergenic 501357 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr8-4807 chr8 13549424 13549634 + 9.90 0.000 intron (NM_001348082, intron 1 of 16) intron (NM_001348082, intron 1 of 16) -17340 NM_001007090 157773 Hs.104941 NM_001007090 ENSG00000164743 C8orf48 - chromosome 8 open reading frame 48 protein-coding chr6-2580 chr6 70774913 70775123 + 9.90 0.000 intron (NM_021940, intron 4 of 9) AluSg|SINE|Alu 106488 NM_001281440 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr10-2261 chr10 114956504 114956714 + 9.90 0.000 intron (NM_139169, intron 3 of 7) Charlie1|DNA|hAT-Charlie 18414 NM_139169 142940 Hs.21187 NM_139169 ENSG00000165832 TRUB1 PUS4 TruB pseudouridine synthase family member 1 protein-coding chr17-4366 chr17 17363566 17363776 + 9.90 0.000 Intergenic Intergenic 60298 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr10-3400 chr10 30291710 30291920 + 9.90 0.000 Intergenic AluSx|SINE|Alu 57523 NM_018109 55149 Hs.173946 NM_018109 ENSG00000107951 MTPAP PAPD1|SPAX4|TENT6 mitochondrial poly(A) polymerase protein-coding chr2-12423 chr2 57268009 57268219 + 9.90 0.000 Intergenic MSTA|LTR|ERVL-MaLR -639537 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr15-1234 chr15 69059255 69059465 + 9.90 0.000 3' UTR (NM_001184779, exon 16 of 16) 3' UTR (NM_001184779, exon 16 of 16) -21490 NR_026949 283673 Hs.177927 NM_173610 ENSG00000212766 EWSAT1 LINC00277|NCRNA00277|TMEM84 Ewing sarcoma associated transcript 1 ncRNA chr7-3732 chr7 67596698 67596908 + 9.90 0.000 Intergenic MER66B|LTR|ERV1 260827 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr12-3008 chr12 124327928 124328138 + 9.90 0.000 intron (NM_001077261, intron 45 of 47) intron (NM_001077261, intron 45 of 47) 9209 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr16-2584 chr16 85733542 85733752 + 9.90 0.000 intron (NR_161452, intron 2 of 4) intron (NR_161452, intron 2 of 4) 8053 NR_031731 100302261 NR_031731 ENSG00000283416 MIR1910 MIRN1910|hsa-mir-1910|mir-1910 microRNA 1910 ncRNA chr16-1578 chr16 88483013 88483223 + 9.90 0.000 intron (NM_153813, intron 1 of 9) intron (NM_153813, intron 1 of 9) 14200 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr17-3658 chr17 8085843 8086053 + 9.90 0.000 intron (NM_001139, intron 2 of 14) intron (NM_001139, intron 2 of 14) 1768 NM_001139 242 Hs.136574 NM_001139 ENSG00000179477 ALOX12B 12R-LOX|ARCI2 arachidonate 12-lipoxygenase, 12R type protein-coding chr6-7750 chr6 92247784 92247994 + 9.90 0.000 Intergenic Intergenic -557461 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr14-2943 chr14 47141194 47141404 + 9.90 0.000 intron (NM_001113498, intron 4 of 16) L1MA4A|LINE|L1 201947 NR_103766 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr5-9197 chr5 180012304 180012514 + 9.90 0.000 intron (NM_001280801, intron 3 of 7) intron (NM_001280801, intron 3 of 7) 2988 NR_029885 442908 NR_029885 ENSG00000198995 MIR340 MIRN340|hsa-mir-340|mir-340 microRNA 340 ncRNA chr3-10268 chr3 124263283 124263493 + 9.90 0.000 intron (NM_001024660, intron 3 of 59) intron (NM_001024660, intron 3 of 59) -110944 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr6-4394 chr6 25674937 25675147 + 9.90 0.000 intron (NM_006998, intron 6 of 10) LTR76|LTR|ERV1 22827 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr16-3717 chr16 3539324 3539534 + 9.90 0.000 TTS (NM_001330454) TTS (NM_001330454) 29535 NM_024793 23059 Hs.155995 NM_015041 ENSG00000103351 CLUAP1 CFAP22|FAP22|IFT38 clusterin associated protein 1 protein-coding chrX-2349 chrX 65127745 65127955 + 9.90 0.000 Intergenic L1PB1|LINE|L1 -93109 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr16-2980 chr16 17555344 17555554 + 9.90 0.000 Intergenic L2b|LINE|L2 -84489 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr20-1747 chr20 47795662 47795872 + 9.90 0.000 Intergenic Intergenic -9151 NM_001161841 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr18-1563 chr18 30568972 30569182 + 9.90 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 270167 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chrX-1394 chrX 154542600 154542810 + 9.90 0.000 intron (NM_001099856, intron 1 of 9) L2a|LINE|L2 493 NM_001321396 8517 Hs.43505 NM_003639 ENSG00000269335 IKBKG AMCBX1|EDAID1|FIP-3|FIP3|Fip3p|IKK-gamma|IKKAP1|IKKG|IMD33|IP|IP1|IP2|IPD2|NEMO|ZC2HC9 inhibitor of nuclear factor kappa B kinase regulatory subunit gamma protein-coding chr3-9100 chr3 28476397 28476607 + 9.90 0.000 intron (NM_001324170, intron 3 of 6) intron (NM_001324170, intron 3 of 6) -98776 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr4-3418 chr4 72708426 72708636 + 9.90 0.000 Intergenic Intergenic -139310 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr9-5121 chr9 36019390 36019600 + 9.90 0.000 Intergenic Intergenic -17418 NM_021111 8434 Hs.388918 NM_021111 ENSG00000122707 RECK ST15 reversion inducing cysteine rich protein with kazal motifs protein-coding chr6-3949 chr6 88273883 88274093 + 9.90 0.000 Intergenic Intergenic -106639 NM_001370546 1268 Hs.75110 NM_016083 ENSG00000118432 CNR1 CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR cannabinoid receptor 1 protein-coding chr3-4173 chr3 126718043 126718253 + 9.90 0.000 intron (NM_032343, intron 1 of 7) MIR3|SINE|MIR 13908 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr8-3692 chr8 18249348 18249558 + 9.90 0.000 Intergenic MER92A|LTR|ERV1 27785 NM_001160174 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr1-8973 chr1 9658656 9658866 + 9.90 0.000 intron (NM_005026, intron 1 of 23) AluSx|SINE|Alu -4175 NR_027045 644997 Hs.568595 NM_001045478 ENSG00000179840 PIK3CD-AS1 C1orf200 PIK3CD antisense RNA 1 ncRNA chr5-7636 chr5 51227892 51228102 + 9.90 0.000 Intergenic MIRb|SINE|MIR 155335 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA chr18-1551 chr18 24466968 24467178 + 9.90 0.000 intron (NM_001143828, intron 1 of 1) MIR|SINE|MIR 6436 NM_021624 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr7-1908 chr7 1793459 1793669 + 9.90 0.000 Intergenic L1ME3A|LINE|L1 50689 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr15-2507 chr15 37163210 37163420 + 9.90 0.000 Intergenic Intergenic -62004 NM_001220482 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr20-4427 chr20 60660120 60660330 + 9.90 0.000 Intergenic AluJb|SINE|Alu 95663 NR_039653 100616440 NR_039653 ENSG00000265617 MIR548AG2 - microRNA 548ag-2 ncRNA chr6-1838 chr6 159170093 159170303 + 9.90 0.000 promoter-TSS (NR_121668) promoter-TSS (NR_121668) -191 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA chr10-7954 chr10 54908314 54908524 + 9.90 0.000 intron (NM_001354404, intron 3 of 34) MER52D|LTR|ERV1 -107128 NM_001142767 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding chr5-5394 chr5 135067671 135067881 + 9.90 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -27729 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr11-6767 chr11 85942473 85942683 + 9.90 0.000 Intergenic HERVL18-int|LTR|ERVL 87477 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr12-2202 chr12 27561751 27561961 + 9.90 0.000 intron (NM_003622, intron 1 of 29) AluJr|SINE|Alu 37650 NM_003622 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr12-6068 chr12 117363280 117363490 + 9.90 0.000 Intergenic Intergenic -1583 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr13-1642 chr13 59790645 59790855 + 9.90 0.000 intron (NM_001258369, intron 25 of 26) intron (NM_001258369, intron 25 of 26) -221968 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr5-5557 chr5 148489598 148489808 + 9.90 0.000 intron (NM_001040173, intron 5 of 6) intron (NM_001040173, intron 5 of 6) 105745 NM_205836 81545 Hs.483772 NM_030793 ENSG00000145868 FBXO38 Fbx38|HMN2D|MOKA|SP329 F-box protein 38 protein-coding chr12-5381 chr12 120286939 120287149 + 9.90 0.000 Intergenic MIR|SINE|MIR 4859 NR_003137 26834 NR_003137 ENSG00000202538 RNU4-2 RNU4-1B|RNU4B1|RNU4C|U4A|U4b|U4c RNA, U4 small nuclear 2 snRNA chr20-1939 chr20 22068721 22068931 + 9.90 0.000 intron (NR_038394, intron 2 of 3) intron (NR_038394, intron 2 of 3) 14736 NR_038394 100270679 Hs.385748 NR_038394 ENSG00000234435 LINC01432 - long intergenic non-protein coding RNA 1432 ncRNA chr14-2407 chr14 59507456 59507666 + 9.90 0.000 intron (NM_001164399, intron 19 of 19) intron (NM_001164399, intron 19 of 19) 23044 NM_016475 51528 Hs.446850 NM_016475 ENSG00000050130 JKAMP C14orf100|C24orf100|CDA06|HSPC213|HSPC327|JAMP JNK1/MAPK8 associated membrane protein protein-coding chr6-2804 chr6 150609466 150609676 + 9.90 0.000 intron (NM_001329799, intron 1 of 15) L2a|LINE|L2 9686 NM_001329804 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr2-8138 chr2 82136977 82137187 + 9.90 0.000 Intergenic AluSp|SINE|Alu -670136 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr1-10643 chr1 181550290 181550500 + 9.90 0.000 intron (NM_001205293, intron 3 of 47) intron (NM_001205293, intron 3 of 47) 66878 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr5-5733 chr5 169591832 169592042 + 9.90 0.000 intron (NM_001329641, intron 3 of 11) intron (NM_001329641, intron 3 of 11) 7857 NM_001329640 54908 Hs.368710 NM_017785 ENSG00000040275 SPDL1 CCDC99 spindle apparatus coiled-coil protein 1 protein-coding chr1-6089 chr1 112713968 112714178 + 9.90 0.000 intron (NM_005167, intron 1 of 9) intron (NM_005167, intron 1 of 9) 1255 NM_005167 333926 Hs.655231 NM_005167 ENSG00000155367 PPM1J PP2CZ|PP2Czeta|PPP2CZ protein phosphatase, Mg2+/Mn2+ dependent 1J protein-coding chr1-4559 chr1 76006270 76006480 + 9.90 0.000 Intergenic Intergenic -4949 NR_125939 101927342 Hs.216363 NR_125939 LOC101927342 - uncharacterized LOC101927342 ncRNA chr10-5367 chr10 73442109 73442319 + 9.90 0.000 intron (NM_001142353, intron 12 of 13) Tigger19b|DNA|TcMar-Tigger -8653 NM_001024593 118490 Hs.631823 NM_001024593 ENSG00000166343 MSS51 ZMYND17 MSS51 mitochondrial translational activator protein-coding chr11-1964 chr11 2109131 2109341 + 9.90 0.000 Intergenic Intergenic 24973 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr17-5669 chr17 50394666 50394876 + 9.90 0.000 intron (NM_018509, intron 2 of 6) intron (NM_018509, intron 2 of 6) 2752 NM_018509 55379 Hs.370927 NM_018509 ENSG00000108829 LRRC59 PRO1855|p34 leucine rich repeat containing 59 protein-coding chr7-6528 chr7 37394024 37394234 + 9.90 0.000 intron (NM_001206480, intron 1 of 21) L2c|LINE|L2 -40461 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr2-1851 chr2 229743035 229743245 + 9.90 0.000 Intergenic SVA_D|Retroposon|SVA -28585 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr7-4830 chr7 101452235 101452445 + 9.90 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 89465 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr10-4618 chr10 118289659 118289869 + 9.90 0.000 Intergenic HAL1|LINE|L1 52560 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr4-7160 chr4 39218401 39218611 + 9.90 0.000 intron (NM_025132, intron 14 of 36) Tigger3b|DNA|TcMar-Tigger 35977 NM_001317924 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr9-2674 chr9 62808167 62808377 + 9.90 0.000 intron (NR_121647, intron 2 of 4) intron (NR_121647, intron 2 of 4) 6807 NR_121647 103352539 Hs.351215 NR_121647 ENSG00000238113 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA chrX-3652 chrX 100047180 100047390 + 9.90 0.000 Intergenic MLT2B1|LTR|ERVL 362988 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr22-2013 chr22 32059332 32059542 + 9.90 0.000 intron (NM_001256314, intron 1 of 13) intron (NM_001256314, intron 1 of 13) 267 NM_001256314 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr11-5093 chr11 117671167 117671377 + 9.90 0.000 intron (NM_020693, intron 3 of 32) MIR3|SINE|MIR 125944 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr17-7763 chr17 34930069 34930279 + 9.90 0.000 intron (NM_006584, intron 12 of 13) AluSx1|SINE|Alu 31286 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr4-3086 chr4 150960100 150960310 + 9.90 0.000 intron (NM_001367550, intron 2 of 56) L1MC5|LINE|L1 55062 NM_001199282 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr20-1544 chr20 54668492 54668702 + 9.90 0.000 Intergenic MIRb|SINE|MIR 193004 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr20-3128 chr20 34684688 34684898 + 9.90 0.000 Intergenic MIR|SINE|MIR -7508 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr16-2961 chr16 9225424 9225634 + 9.90 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -130059 NR_135195 101927009 Hs.537273 NR_135195 ENSG00000261617 LINC02177 - long intergenic non-protein coding RNA 2177 ncRNA chr12-3151 chr12 47801748 47801958 + 9.90 0.000 intron (NM_001308090, intron 1 of 24) MIRb|SINE|MIR 18050 NM_001368046 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr9-2114 chr9 93967087 93967297 + 9.90 0.000 Intergenic Intergenic 11358 NR_144455 101928040 Hs.375820 NR_144455 ENSG00000235601 BARX1-DT BARX1-AS1 BARX1 divergent transcript ncRNA chr6-5452 chr6 158597965 158598175 + 9.90 0.000 intron (NM_020823, intron 6 of 16) L3|LINE|CR1 -11637 NR_106981 102465694 NR_106981 ENSG00000278571 MIR7161 hsa-mir-7161 microRNA 7161 ncRNA chr12-3680 chr12 127393880 127394090 + 9.90 0.000 Intergenic MER20|DNA|hAT-Charlie -53913 NR_110057 101927616 Hs.637827 NR_110057 ENSG00000256362 LINC02375 - long intergenic non-protein coding RNA 2375 ncRNA chr13-1403 chr13 23772092 23772302 + 9.90 0.000 intron (NM_005932, intron 16 of 18) intron (NM_005932, intron 16 of 18) -116671 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr11-5034 chr11 85485677 85485887 + 9.90 0.000 intron (NM_001142699, intron 3 of 27) L1M2|LINE|L1 141488 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr18-1220 chr18 41075587 41075797 + 9.90 0.000 Intergenic Intergenic 444985 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr2-8680 chr2 149902066 149902276 + 9.90 0.000 Intergenic LTR16|LTR|ERVL -42980 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr9-2661 chr9 36822465 36822675 + 9.90 0.000 TTS (NR_039686) TTS (NR_039686) 1029 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr9-5175 chr9 69621875 69622085 + 9.90 0.000 intron (NM_001163, intron 1 of 12) intron (NM_001163, intron 1 of 12) 50391 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr22-3826 chr22 31321251 31321461 + 9.90 0.000 Intergenic Intergenic -13993 NR_110542 101929760 Hs.661718 NR_110542 ENSG00000228839 PIK3IP1-AS1 - PIK3IP1 antisense RNA 1 (head to head) ncRNA chr7-5964 chr7 100983584 100983794 + 9.90 0.000 intron (NM_001164462, intron 1 of 11) L2b|LINE|L2 14066 NM_001164462 10071 Hs.489355 NM_001164462 ENSG00000205277 MUC12 MUC-11|MUC-12|MUC11 mucin 12, cell surface associated protein-coding chr1-13196 chr1 207616715 207616925 + 9.90 0.000 intron (NM_000573, intron 33 of 38) intron (NM_000573, intron 33 of 38) -28313 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr2-14168 chr2 205117095 205117305 + 9.90 0.000 intron (NM_205863, intron 6 of 21) intron (NM_205863, intron 6 of 21) -565300 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr8-3337 chr8 38273649 38273859 + 9.90 0.000 3' UTR (NM_023034, exon 24 of 24) 3' UTR (NM_023034, exon 24 of 24) -4522 NM_001354454 84513 Hs.567619 NM_032483 ENSG00000147535 PLPP5 DPPL1|HTPAP|PPAPDC1B phospholipid phosphatase 5 protein-coding chr10-9099 chr10 126495740 126495950 + 9.90 0.000 intron (NR_146939, intron 4 of 11) intron (NR_146939, intron 4 of 11) 25648 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr17-2940 chr17 57184197 57184407 + 9.90 0.000 Intergenic L1ME2|LINE|L1 -71549 NM_001322250 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr6-1142 chr6 158232143 158232353 + 9.90 0.000 Intergenic CpG 63901 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr5-3190 chr5 78407063 78407273 + 9.90 0.000 intron (NR_110885, intron 2 of 7) L1MEd|LINE|L1 46551 NM_001290229 9522 Hs.482587 NM_004866 ENSG00000085365 SCAMP1 SCAMP|SCAMP37 secretory carrier membrane protein 1 protein-coding chr6-6372 chr6 71028618 71028828 + 9.90 0.000 Intergenic L1PBa1|LINE|L1 -71663 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr9-5717 chr9 125666036 125666246 + 9.90 0.000 intron (NM_001006621, intron 1 of 9) intron (NM_001006621, intron 1 of 9) 41067 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr18-3383 chr18 59424090 59424300 + 9.90 0.000 Intergenic Intergenic -64930 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr1-12847 chr1 96327668 96327878 + 9.90 0.000 intron (NR_110693, intron 3 of 5) L2|LINE|L2 46352 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr2-3510 chr2 222939508 222939718 + 9.90 0.000 intron (NM_004457, intron 16 of 16) intron (NM_004457, intron 16 of 16) 78577 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr11-4463 chr11 103773117 103773327 + 9.90 0.000 Intergenic MER75|DNA|PiggyBac -76684 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr2-11685 chr2 8595720 8595930 + 9.90 0.000 Intergenic Intergenic -12033 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr5-6118 chr5 29485220 29485430 + 9.90 0.000 Intergenic Intergenic -89349 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA chr16-4191 chr16 11180651 11180861 + 9.90 0.000 3' UTR (NM_015226, exon 23 of 23) 3' UTR (NM_015226, exon 23 of 23) 75426 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr5-1462 chr5 68683804 68684014 + 9.90 0.000 Intergenic Intergenic 346018 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr1-11696 chr1 7683168 7683378 + 9.90 0.000 intron (NM_001349613, intron 1 of 11) intron (NM_001349613, intron 1 of 11) 3185 NM_001349613 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr8-4274 chr8 94692519 94692729 + 9.90 0.000 intron (NM_001122825, intron 13 of 13) intron (NM_001122825, intron 13 of 13) -27276 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr5-3473 chr5 170539408 170539618 + 9.90 0.000 intron (NM_001278339, intron 1 of 7) L2a|LINE|L2 35493 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr17-5140 chr17 7988779 7988989 + 9.90 0.000 Intergenic Intergenic -13786 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr5-5600 chr5 151232581 151232791 + 9.90 0.000 Intergenic Intergenic -8594 NM_015621 26112 Hs.655336 NM_015621 ENSG00000198624 CCDC69 - coiled-coil domain containing 69 protein-coding chr19-5266 chr19 48608668 48608878 + 9.90 0.000 intron (NM_017708, intron 3 of 4) MER5A|DNA|hAT-Charlie 2031 NM_133498 171169 Hs.122599 NM_133498 ENSG00000177202 SPACA4 SAMP14 sperm acrosome associated 4 protein-coding chr6-2688 chr6 25312887 25313097 + 9.90 0.000 intron (NM_001173977, intron 2 of 36) intron (NM_001173977, intron 2 of 36) 33618 NM_001173977 55604 Hs.649550 NM_017640 ENSG00000079691 CARMIL1 CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5 capping protein regulator and myosin 1 linker 1 protein-coding chr6-2001 chr6 17971562 17971772 + 9.90 0.000 intron (NM_001243423, intron 2 of 2) AluJb|SINE|Alu 15968 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr10-7481 chr10 10871963 10872173 + 9.90 0.000 intron (NM_001326328, intron 2 of 15) intron (NM_001326328, intron 2 of 15) 73343 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr12-5539 chr12 132580911 132581121 + 9.90 0.000 promoter-TSS (NR_106821) promoter-TSS (NR_106821) -981 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr22-2050 chr22 43510059 43510269 + 9.90 0.000 Intergenic Intergenic -6090 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr8-3555 chr8 126449255 126449465 + 9.90 0.000 Intergenic Intergenic 109118 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr19-2388 chr19 5834268 5834478 + 9.90 0.000 intron (NM_001369502, intron 2 of 3) intron (NM_001369502, intron 2 of 3) 4419 NM_001369505 2528 Hs.631846 NM_000150 ENSG00000156413 FUT6 FCT3A|FT1A|Fuc-TVI|FucT-VI fucosyltransferase 6 protein-coding chr15-1594 chr15 77060500 77060710 + 9.90 0.000 intron (NM_198902, intron 1 of 5) intron (NM_198902, intron 1 of 5) 10504 NM_198902 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr11-3669 chr11 126993137 126993347 + 9.90 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -4700 NR_036126 100422918 NR_036126 ENSG00000266215 MIR3167 - microRNA 3167 ncRNA chr1-9222 chr1 22634730 22634940 + 9.90 0.000 Intergenic MER52A|LTR|ERV1 -1469 NR_106742 102466615 NR_106742 ENSG00000276835 MIR6127 hsa-mir-6127 microRNA 6127 ncRNA chr7-2698 chr7 24820258 24820468 + 9.90 0.000 intron (NR_104111, intron 15 of 21) intron (NR_104111, intron 15 of 21) -62424 NM_004403 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr7-2530 chr7 65364638 65364848 + 9.90 0.000 Intergenic AluSz|SINE|Alu -9056 NM_001287532 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr15-5240 chr15 97593197 97593407 + 9.90 0.000 Intergenic L1PA8|LINE|L1 -32604 NR_110756 101927310 Hs.560324 NR_110756 ENSG00000259582 LOC101927310 - uncharacterized LOC101927310 ncRNA chr14-3005 chr14 53435784 53435994 + 9.90 0.000 Intergenic Intergenic 282535 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr12-5506 chr12 128407069 128407279 + 9.90 0.000 intron (NM_001136103, intron 1 of 8) THE1B|LTR|ERVL-MaLR 113082 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr4-5154 chr4 154846375 154846585 + 9.90 0.000 Intergenic Intergenic 64975 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr3-6903 chr3 156522952 156523162 + 9.90 0.000 intron (NM_172159, intron 11 of 13) intron (NM_172159, intron 11 of 13) 31068 NM_001308205 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr17-2723 chr17 72151796 72152006 + 9.90 0.000 Intergenic Intergenic 30881 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box transcription factor 9 protein-coding chr4-3911 chr4 150897555 150897765 + 9.90 0.000 intron (NM_001367550, intron 15 of 56) intron (NM_001367550, intron 15 of 56) 117607 NM_001199282 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr19-3469 chr19 34471091 34471301 + 9.90 0.000 TTS (NM_005499) TTS (NM_005499) -10562 NM_001080436 126374 Hs.585010 NM_001080436 ENSG00000142279 WTIP - WT1 interacting protein protein-coding chr2-8478 chr2 126146301 126146511 + 9.90 0.000 Intergenic Intergenic -28421 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr21-924 chr21 35805345 35805555 + 9.90 0.000 Intergenic L1PBa1|LINE|L1 -80995 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr18-3169 chr18 42909120 42909330 + 9.90 0.000 intron (NM_002930, intron 4 of 4) L1PB2|LINE|L1 206460 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr8-2690 chr8 93550731 93550941 + 9.90 0.000 intron (NR_033858, intron 6 of 10) AluSz|SINE|Alu 149597 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr16-2637 chr16 23182371 23182581 + 9.90 0.000 promoter-TSS (NM_001039) promoter-TSS (NM_001039) -269 NM_001039 6340 Hs.371727 NM_001039 ENSG00000166828 SCNN1G BESC3|ENaCg|ENaCgamma|LDLS2|PHA1|SCNEG sodium channel epithelial 1 gamma subunit protein-coding chr10-8211 chr10 72752604 72752814 + 9.90 0.000 intron (NR_073062, intron 3 of 9) intron (NR_073062, intron 3 of 9) 31680 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr3-9072 chr3 26623286 26623496 + 9.90 0.000 promoter-TSS (NM_001317809) promoter-TSS (NM_001317809) -309 NM_001317808 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr1-10765 chr1 200877973 200878183 + 9.90 0.000 Intergenic MIRc|SINE|MIR 5097 NM_005298 2848 Hs.534316 NM_005298 ENSG00000170128 GPR25 - G protein-coupled receptor 25 protein-coding chr3-3939 chr3 50011277 50011487 + 9.90 0.000 intron (NM_001349194, intron 3 of 17) intron (NM_001349194, intron 3 of 17) 71232 NM_001349190 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr1-6813 chr1 92186201 92186411 + 9.90 0.000 Intergenic Intergenic 17382 NM_015237 23285 Hs.21554 NM_015237 ENSG00000189195 KIAA1107 - KIAA1107 protein-coding chrX-873 chrX 153542414 153542624 + 9.90 0.000 intron (NM_001001344, intron 4 of 19) intron (NM_001001344, intron 4 of 19) 6397 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr9-3755 chr9 123468889 123469099 + 9.90 0.000 intron (NM_001352968, intron 12 of 18) intron (NM_001352968, intron 12 of 18) 16628 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr11-6448 chr11 66686991 66687201 + 9.90 0.000 exon (NM_006946, exon 35 of 37) exon (NM_006946, exon 35 of 37) -9209 NM_001286135 83759 Hs.618713 NM_031492 ENSG00000173914 RBM4B RBM30|RBM4L|ZCCHC15|ZCCHC21B|ZCRB3B RNA binding motif protein 4B protein-coding chr3-5254 chr3 108406568 108406778 + 9.90 0.000 intron (NM_014981, intron 33 of 41) intron (NM_014981, intron 33 of 41) 94888 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr2-2482 chr2 129902559 129902769 + 9.90 0.000 Intergenic Intergenic -20513 NR_110285 101927924 Hs.570248 NR_110285 ENSG00000237574 LINC01856 - long intergenic non-protein coding RNA 1856 ncRNA chr11-4359 chr11 73966178 73966388 + 9.90 0.000 intron (NM_153614, intron 5 of 7) intron (NM_153614, intron 5 of 7) 15964 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr3-8382 chr3 95426010 95426220 + 9.90 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 257078 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr8-3262 chr8 4964796 4965006 + 9.90 0.000 intron (NM_033225, intron 1 of 69) intron (NM_033225, intron 1 of 69) 30013 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr4-4912 chr4 122764050 122764260 + 9.90 0.000 Intergenic L1ME3A|LINE|L1 31451 NM_152618 166379 Hs.400698 NM_152618 ENSG00000181004 BBS12 C4orf24 Bardet-Biedl syndrome 12 protein-coding chr4-2753 chr4 8599738 8599948 + 9.90 0.000 intron (NM_001014448, intron 2 of 10) MIRb|SINE|MIR 7078 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr14-3199 chr14 73149715 73149925 + 9.90 0.000 intron (NM_000021, intron 3 of 11) intron (NM_000021, intron 3 of 11) 13313 NM_000021 5663 Hs.3260 NM_000021 ENSG00000080815 PSEN1 ACNINV3|AD3|FAD|PS-1|PS1|S182 presenilin 1 protein-coding chr18-868 chr18 36507656 36507866 + 9.90 0.000 intron (NM_001281740, intron 4 of 28) intron (NM_001281740, intron 4 of 28) 155657 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr8-6303 chr8 43128015 43128225 + 9.90 0.000 Intergenic L1M2|LINE|L1 -12344 NM_001363229 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr1-8009 chr1 220303037 220303247 + 9.90 0.000 Intergenic MIR|SINE|MIR -30689 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr20-1603 chr20 7113911 7114121 + 9.90 0.000 Intergenic MER20|DNA|hAT-Charlie 140186 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA chr12-3294 chr12 76584038 76584248 + 9.90 0.000 Intergenic Intergenic -24372 NM_001319652 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr6-4612 chr6 44982347 44982557 + 9.90 0.000 intron (NM_181356, intron 8 of 12) AluYh3|SINE|Alu 215318 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr12-2401 chr12 43408006 43408216 + 9.90 0.000 intron (NM_025003, intron 28 of 38) intron (NM_025003, intron 28 of 38) 144092 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr4-2048 chr4 8592512 8592722 + 9.90 0.000 promoter-TSS (NM_003652) promoter-TSS (NM_003652) -43 NM_001014448 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr15-2005 chr15 44102199 44102409 + 9.90 0.000 intron (NM_001286490, intron 1 of 15) intron (NM_001286490, intron 1 of 15) 92142 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr4-4036 chr4 2593346 2593556 + 9.90 0.000 intron (NM_001366318, intron 1 of 20) L2a|LINE|L2 -31981 NM_001256668 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr5-2782 chr5 176722890 176723100 + 9.90 0.000 Intergenic Intergenic -20210 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr16-2684 chr16 75755782 75755992 + 9.90 0.000 Intergenic Intergenic -29397 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr17-4303 chr17 79112190 79112400 + 9.90 0.000 intron (NM_001082575, intron 5 of 14) intron (NM_001082575, intron 5 of 14) 37358 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr8-4063 chr8 64709571 64709781 + 9.90 0.000 intron (NM_004820, intron 1 of 5) intron (NM_004820, intron 1 of 5) 89061 NM_001324112 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr8-5552 chr8 73087109 73087319 + 9.90 0.000 intron (NM_153225, intron 1 of 4) MIR|SINE|MIR 5958 NM_153225 157869 Hs.439040 NM_153225 ENSG00000164764 SBSPON C8orf84|RPESP somatomedin B and thrombospondin type 1 domain containing protein-coding chrX-1713 chrX 20665637 20665847 + 9.90 0.000 Intergenic Intergenic -398833 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr6-3758 chr6 13677938 13678148 + 9.90 0.000 intron (NM_005493, intron 2 of 13) AluJb|SINE|Alu 33792 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr22-4214 chr22 46350173 46350383 + 9.90 0.000 intron (NM_001282783, intron 3 of 9) intron (NM_001282783, intron 3 of 9) 14564 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr3-9565 chr3 53698243 53698453 + 9.90 0.000 intron (NM_000720, intron 8 of 48) L1MC4a|LINE|L1 148071 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr11-10189 chr11 95455030 95455240 + 9.90 0.000 Intergenic MIRc|SINE|MIR -222660 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr3-8988 chr3 17672693 17672903 + 9.90 0.000 intron (NM_001134381, intron 1 of 23) intron (NM_001134381, intron 1 of 23) 27222 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr19-3654 chr19 3838668 3838878 + 9.90 0.000 intron (NM_015174, intron 1 of 18) intron (NM_015174, intron 1 of 18) 30265 NM_015174 23217 Hs.65750 NM_015174 ENSG00000105278 ZFR2 KIAA1086 zinc finger RNA binding protein 2 protein-coding chr2-12871 chr2 97590933 97591143 + 9.90 0.000 Intergenic Intergenic -1073 NM_025190 57730 Hs.532921 NM_020970 ENSG00000196912 ANKRD36B KIAA1641 ankyrin repeat domain 36B protein-coding chr13-3781 chr13 44814193 44814403 + 9.90 0.000 Intergenic Intergenic -4668 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr1-10966 chr1 214039917 214040127 + 9.90 0.000 3' UTR (NM_002763, exon 5 of 5) 3' UTR (NM_002763, exon 5 of 5) 51489 NM_002763 5629 Hs.741808 NM_002763 ENSG00000117707 PROX1 - prospero homeobox 1 protein-coding chr3-4659 chr3 38763785 38763995 + 9.90 0.000 intron (NM_006514, intron 4 of 26) intron (NM_006514, intron 4 of 26) 30120 NM_001293307 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr10-3954 chr10 103416686 103416896 + 9.90 0.000 intron (NM_014976, intron 13 of 35) intron (NM_014976, intron 13 of 35) 20165 NM_014976 22984 Hs.239499 NM_014976 ENSG00000148843 PDCD11 ALG-4|ALG4|NFBP|RRP5 programmed cell death 11 protein-coding chr1-6333 chr1 3910888 3911098 + 9.90 0.000 intron (NR_024455, intron 2 of 3) intron (NR_024455, intron 2 of 3) 10589 NR_024455 100133612 Hs.307652 NR_024455 ENSG00000236423 LINC01134 - long intergenic non-protein coding RNA 1134 ncRNA chr14-3257 chr14 77574878 77575088 + 9.90 0.000 intron (NM_004863, intron 4 of 11) AluJr|SINE|Alu 41784 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr10-2152 chr10 86786423 86786633 + 9.90 0.000 intron (NM_004329, intron 1 of 12) L2|LINE|L2 29889 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr6-5239 chr6 136079402 136079612 + 9.90 0.000 intron (NM_018945, intron 2 of 12) MER3|DNA|hAT-Charlie -6680 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr1-4525 chr1 40607957 40608167 + 9.90 0.000 Intergenic Intergenic 57620 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr17-4336 chr17 3002482 3002692 + 9.90 0.000 intron (NM_001330058, intron 14 of 24) intron (NM_001330058, intron 14 of 24) -36692 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr13-1008 chr13 20773175 20773385 + 9.90 0.000 intron (NM_001318939, intron 1 of 4) intron (NM_001318939, intron 1 of 4) 678 NM_174928 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr3-5189 chr3 70212772 70212982 + 9.90 0.000 intron (NM_001364677, intron 2 of 3) AluJb|SINE|Alu 99761 NM_001364677 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr10-3308 chr10 1349939 1350149 + 9.90 0.000 intron (NM_018702, intron 3 of 9) HERVH-int|LTR|ERV1 -176586 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr18-1504 chr18 427074 427284 + 9.90 0.000 intron (NM_130386, intron 2 of 9) MIRc|SINE|MIR 73522 NM_130386 81035 Hs.464422 NM_030781 ENSG00000158270 COLEC12 CLP1|NSR2|SCARA4|SRCL collectin subfamily member 12 protein-coding chr15-3256 chr15 75784807 75785017 + 9.90 0.000 Intergenic Intergenic -22597 NR_036198 100423035 NR_036198 ENSG00000284385 MIR4313 - microRNA 4313 ncRNA chr19-4354 chr19 2089177 2089387 + 9.90 0.000 intron (NM_130807, intron 1 of 4) MIRc|SINE|MIR 7044 NM_130807 126308 Hs.744938 NM_130807 ENSG00000172081 MOB3A MOB-LAK|MOB1C|MOBKL2A|moblak MOB kinase activator 3A protein-coding chr11-6188 chr11 45424698 45424908 + 9.90 0.000 Intergenic Intergenic 53406 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr2-5787 chr2 227367012 227367222 + 9.90 0.000 intron (NM_024795, intron 2 of 3) MER20|DNA|hAT-Charlie 12189 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr13-4086 chr13 77516278 77516488 + 9.90 0.000 Intergenic Intergenic -19291 NM_001160706 8796 Hs.534699 NM_003843 ENSG00000136155 SCEL - sciellin protein-coding chr1-8670 chr1 211067399 211067609 + 9.90 0.000 intron (NM_002238, intron 5 of 10) ERV3-16A3_LTR|LTR|ERVL 65870 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA chr1-2464 chr1 69567472 69567682 + 9.90 0.000 5' UTR (NM_001366836, exon 1 of 8) 5' UTR (NM_001366836, exon 1 of 8) 243 NM_001370785 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr1-14241 chr1 36539146 36539356 + 9.90 0.000 Intergenic L2a|LINE|L2 -55937 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr11-6706 chr11 78666718 78666928 + 9.90 0.000 intron (NM_001098816, intron 32 of 33) MIRb|SINE|MIR -91959 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chrX-4521 chrX 66877272 66877482 + 9.90 0.000 Intergenic Intergenic -238079 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr2-3122 chr2 160920866 160921076 + 9.90 0.000 Intergenic Intergenic -215984 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr11-5252 chr11 29393963 29394173 + 9.90 0.000 Intergenic MER89|LTR|ERV1 -200345 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr17-3986 chr17 66965074 66965284 + 9.90 0.000 intron (NM_014405, intron 1 of 3) CpG 472 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr1-11114 chr1 230940922 230941132 + 9.90 0.000 intron (NM_001122835, intron 4 of 20) intron (NM_001122835, intron 4 of 20) 37834 NM_001122835 79573 Hs.424788 NM_024525 ENSG00000143643 TTC13 - tetratricopeptide repeat domain 13 protein-coding chr2-4042 chr2 110808945 110809155 + 9.90 0.000 intron (NM_001371254, intron 9 of 18) intron (NM_001371254, intron 9 of 18) 76477 NM_001371254 chr15-1299 chr15 43150537 43150747 + 9.90 0.000 intron (NM_024956, intron 7 of 13) intron (NM_024956, intron 7 of 13) 17056 NM_024956 80021 Hs.511175 NM_024956 ENSG00000137842 TMEM62 - transmembrane protein 62 protein-coding chr19-3299 chr19 4294628 4294838 + 9.90 0.000 intron (NM_001308232, intron 2 of 3) intron (NM_001308232, intron 2 of 3) 7698 NM_001169126 126259 Hs.263928 NM_144615 ENSG00000167664 TMIGD2 CD28H|IGPR-1|IGPR1 transmembrane and immunoglobulin domain containing 2 protein-coding chr12-6554 chr12 118508667 118508877 + 9.90 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 132217 NM_022491 64426 Hs.416630 NM_022491 ENSG00000111707 SUDS3 SAP45|SDS3 SDS3 homolog, SIN3A corepressor complex component protein-coding chr21-462 chr21 34845734 34845944 + 9.90 0.000 intron (NM_001001890, intron 3 of 5) intron (NM_001001890, intron 3 of 5) 42860 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr2-7999 chr2 67346780 67346990 + 9.90 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -50448 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr1-5703 chr1 59777075 59777285 + 9.90 0.000 intron (NR_110627, intron 2 of 2) intron (NR_110627, intron 2 of 2) 4385 NR_110627 101926944 Hs.720353 NR_110627 LOC101926944 - uncharacterized LOC101926944 ncRNA chr15-1635 chr15 90335638 90335848 + 9.90 0.000 Intergenic L1ME4b|LINE|L1 13704 NR_028287 23766 Hs.592014 NR_028287 GABARAPL3 ATG8D GABA type A receptor associated protein like 3 pseudogene pseudo chr7-5019 chr7 946563 946773 + 9.90 0.000 promoter-TSS (NM_001284309) promoter-TSS (NM_001284309) -852 NM_001284309 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr12-3882 chr12 116983111 116983321 + 9.90 0.000 intron (NR_103809, intron 2 of 3) intron (NR_103809, intron 2 of 3) 4121 NR_103809 100506551 Hs.657861 NR_103809 ENSG00000257279 LOC100506551 - uncharacterized LOC100506551 ncRNA chr5-4182 chr5 108941816 108942026 + 9.90 0.000 intron (NM_001308031, intron 1 of 10) L1MC1|LINE|L1 17315 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr17-7172 chr17 79718993 79719203 + 9.90 0.000 Intergenic AluJb|SINE|Alu 11832 NR_109783 100652929 Hs.559249 NR_109783 ENSG00000267719 LINC02078 HP09025 long intergenic non-protein coding RNA 2078 ncRNA chr6-3068 chr6 73832630 73832840 + 9.90 0.000 Intergenic L3|LINE|CR1 136532 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr6-5458 chr6 158947308 158947518 + 9.90 0.000 Intergenic MER5B|DNA|hAT-Charlie 52774 NR_144434 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke head 3 protein-coding chr11-6559 chr11 71153894 71154104 + 9.90 0.000 intron (NM_012309, intron 1 of 24) intron (NM_012309, intron 1 of 24) 70797 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr10-5966 chr10 123486046 123486256 + 9.90 0.000 Intergenic MIRb|SINE|MIR -180204 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr3-5796 chr3 27762868 27763078 + 9.90 0.000 Intergenic Intergenic -34615 NR_146630 105377007 NR_146630 LINC01980 - long intergenic non-protein coding RNA 1980 ncRNA chr19-2524 chr19 18768363 18768573 + 9.90 0.000 intron (NM_015321, intron 9 of 13) intron (NM_015321, intron 9 of 13) 22837 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr4-6715 chr4 3815819 3816029 + 9.90 0.000 Intergenic Intergenic 49539 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr9-2276 chr9 124096740 124096950 + 9.90 0.000 Intergenic AluY|SINE|Alu 85077 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr1-10009 chr1 85692889 85693099 + 9.90 0.000 intron (NM_017953, intron 5 of 9) intron (NM_017953, intron 5 of 9) 15439 NM_001170670 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr17-2376 chr17 76906358 76906568 + 9.90 0.000 intron (NM_144677, intron 8 of 16) intron (NM_144677, intron 8 of 16) 33816 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B protein-coding chr15-3790 chr15 69134674 69134884 + 9.90 0.000 Intergenic MER46C|DNA|TcMar-Tigger -25818 NM_001324091 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr20-2557 chr20 36339440 36339650 + 9.90 0.000 intron (NM_001365621, intron 1 of 12) AluJb|SINE|Alu 33206 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr16-3787 chr16 31135465 31135675 + 9.90 0.000 5' UTR (NM_002773, exon 1 of 6) 5' UTR (NM_002773, exon 1 of 6) 157 NM_002773 5652 Hs.75799 NM_002773 ENSG00000052344 PRSS8 CAP1|PROSTASIN serine protease 8 protein-coding chrX-507 chrX 94100616 94100826 + 9.90 0.000 Intergenic L1PA13|LINE|L1 426515 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr19-1719 chr19 47012955 47013165 + 9.90 0.000 Intergenic L2b|LINE|L2 -6777 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr7-2935 chr7 138981798 138982008 + 9.90 0.000 promoter-TSS (NM_001164665) promoter-TSS (NM_001164665) -514 NM_020910 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr9-2659 chr9 36494879 36495089 + 9.90 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -77878 NM_001256691 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr11-10478 chr11 118018924 118019134 + 9.90 0.000 intron (NM_001354434, intron 3 of 5) L1ME3C|LINE|L1 32635 NR_026691 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding chr3-10627 chr3 146969332 146969542 + 9.90 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 47514 NR_135560 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr9-7674 chr9 69758425 69758635 + 9.90 0.000 intron (NM_001099666, intron 1 of 7) intron (NM_001099666, intron 1 of 7) 1481 NM_001366937 375743 Hs.744192 NM_001099666 ENSG00000188647 PTAR1 - protein prenyltransferase alpha subunit repeat containing 1 protein-coding chr5-1927 chr5 177390680 177390890 + 9.90 0.000 TTS (NM_001167579) TTS (NM_001167579) 6351 NM_001167579 6569 Hs.936 NM_003052 ENSG00000131183 SLC34A1 FRTS2|HCINF2|NAPI-3|NPHLOP1|NPT2|NPTIIa|SLC11|SLC17A2 solute carrier family 34 member 1 protein-coding chr1-10492 chr1 164841565 164841775 + 9.90 0.000 intron (NM_001353131, intron 7 of 7) intron (NM_001353131, intron 7 of 7) -67029 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr3-6008 chr3 48727523 48727733 + 9.90 0.000 Intergenic HERVH-int|LTR|ERV1 -10350 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr2-8535 chr2 131653861 131654071 + 9.90 0.000 Intergenic Intergenic 16941 NR_108087 101927994 Hs.635757 NR_108087 ENSG00000224559 LINC01087 - long intergenic non-protein coding RNA 1087 ncRNA chr19-6563 chr19 19343762 19343972 + 9.90 0.000 exon (NM_015329, exon 10 of 19) exon (NM_015329, exon 10 of 19) 23038 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chr3-7179 chr3 188290392 188290602 + 9.90 0.000 intron (NM_005578, intron 2 of 10) MIR|SINE|MIR 65092 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr8-4796 chr8 144884006 144884216 + 9.90 0.000 intron (NM_001363105, intron 4 of 4) L1ME3D|LINE|L1 16194 NM_001363103 58500 Hs.532277 NM_021061 ENSG00000196150 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding chr1-3187 chr1 110035064 110035274 + 9.90 0.000 intron (NR_073071, intron 1 of 21) CpG 545 NM_033088 85369 Hs.584996 NM_033088 ENSG00000143093 STRIP1 FAM40A|FAR11A striatin interacting protein 1 protein-coding chr12-4066 chr12 53306872 53307082 + 9.90 0.000 TTS (NM_001173466) TTS (NM_001173466) 7282 NM_021640 60314 Hs.655988 NM_021640 ENSG00000139637 C12orf10 Gamm1|MST024|MSTP024|MYG|MYG1 chromosome 12 open reading frame 10 protein-coding chr16-3867 chr16 69697284 69697494 + 9.90 0.000 3' UTR (NM_006599, exon 14 of 14) 3' UTR (NM_006599, exon 14 of 14) 11286 NR_145753 109617018 NR_145753 SNORD13H - small nucleolar RNA, C/D box 13H snoRNA chr1-9643 chr1 47221637 47221847 + 9.90 0.000 intron (NM_001290406, intron 2 of 2) MIR3|SINE|MIR 9973 NM_001287347 6886 Hs.705618 NM_003189 ENSG00000162367 TAL1 SCL|TCL5|bHLHa17|tal-1 TAL bHLH transcription factor 1, erythroid differentiation factor protein-coding chr13-839 chr13 75669938 75670148 + 9.90 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 33713 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr12-5482 chr12 124872239 124872449 + 9.90 0.000 Intergenic Intergenic -8480 NR_160423 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chrX-2088 chrX 22247183 22247393 + 9.90 0.000 intron (NM_000444, intron 21 of 21) L1ME3|LINE|L1 -25625 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr21-652 chr21 35254549 35254759 + 9.90 0.000 Intergenic Intergenic -205356 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr1-3686 chr1 162631432 162631642 + 9.90 0.000 promoter-TSS (NM_001354982) promoter-TSS (NM_001354982) -438 NM_001354982 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr4-7866 chr4 103608925 103609135 + 9.90 0.000 intron (NM_001059, intron 3 of 4) intron (NM_001059, intron 3 of 4) 110955 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr1-13719 chr1 15290202 15290412 + 9.90 0.000 intron (NM_052929, intron 4 of 30) intron (NM_052929, intron 4 of 30) 43082 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr1-5640 chr1 24771111 24771321 + 9.90 0.000 intron (NM_013943, intron 1 of 5) intron (NM_013943, intron 1 of 5) 25769 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr20-1540 chr20 51552696 51552906 + 9.90 0.000 intron (NM_001258292, intron 1 of 9) MER102b|DNA|hAT-Charlie 10038 NM_001258292 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr3-10697 chr3 152258435 152258645 + 9.90 0.000 Intergenic Intergenic -10389 NM_021038 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding chr13-1231 chr13 85108619 85108829 + 9.90 0.000 intron (NR_126383, intron 1 of 5) LTR28C|LTR|ERV1 39333 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr7-3433 chr7 156752656 156752866 + 9.90 0.000 intron (NM_001350953, intron 9 of 17) L2a|LINE|L2 108960 NM_001308274 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr14-3109 chr14 65345370 65345580 + 9.90 0.000 Intergenic Intergenic -10292 NR_039857 100616176 NR_039857 ENSG00000266740 MIR4708 mir-4708 microRNA 4708 ncRNA chr9-1944 chr9 34124966 34125176 + 9.90 0.000 exon (NM_015397, exon 2 of 9) exon (NM_015397, exon 2 of 9) 1627 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr8-3216 chr8 129938883 129939093 + 9.90 0.000 intron (NM_001353256, intron 2 of 13) intron (NM_001353256, intron 2 of 13) 823 NM_001330612 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chrX-1224 chrX 78708331 78708541 + 9.90 0.000 Intergenic Intergenic -39273 NM_001278000 2846 Hs.522701 NM_005296 ENSG00000147145 LPAR4 GPR23|LPA4|P2RY9|P2Y5-LIKE|P2Y9 lysophosphatidic acid receptor 4 protein-coding chr3-9341 chr3 46233842 46234052 + 9.90 0.000 Intergenic MIRc|SINE|MIR -8434 NM_178328 1232 Hs.506190 NM_001837 ENSG00000183625 CCR3 CC-CKR-3|CD193|CKR3|CMKBR3 C-C motif chemokine receptor 3 protein-coding chr7-3472 chr7 2098553 2098763 + 9.90 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -9606 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr4-5466 chr4 54029575 54029785 + 9.90 0.000 intron (NM_012110, intron 3 of 5) Tigger20a|DNA|TcMar-Tigger 34925 NM_012110 26511 Hs.335393 NM_012110 ENSG00000109220 CHIC2 BTL cysteine rich hydrophobic domain 2 protein-coding chr14-1522 chr14 55432760 55432970 + 9.90 0.000 intron (NM_199047, intron 4 of 6) intron (NM_199047, intron 4 of 6) 7680 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr9-2429 chr9 136777178 136777388 + 9.90 0.000 Intergenic Intergenic -12765 NM_203347 389812 Hs.413902 NM_203347 ENSG00000177984 LCN15 PRO6093|UNQ2541 lipocalin 15 protein-coding chr3-2818 chr3 13080358 13080568 + 9.90 0.000 Intergenic Intergenic -7034 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr17-3404 chr17 3690586 3690796 + 9.90 0.000 intron (NM_175080, intron 2 of 10) intron (NM_175080, intron 2 of 10) 5464 NM_175080 5026 Hs.731607 NM_002561 ENSG00000083454 P2RX5 LRH-1|P2X5|P2X5R purinergic receptor P2X 5 protein-coding chr5-5223 chr5 115686722 115686932 + 9.90 0.000 Intergenic L1MD2|LINE|L1 -14175 NR_104674 102467217 Hs.147738 NR_104674 LOC102467217 - uncharacterized LOC102467217 ncRNA chr10-4992 chr10 31819721 31819931 + 9.90 0.000 intron (NM_001270696, intron 10 of 17) MLT1H|LTR|ERVL-MaLR 89100 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr10-2767 chr10 123967850 123968060 + 9.90 0.000 Intergenic Intergenic -76148 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr7-6414 chr7 155815343 155815553 + 9.90 0.000 Intergenic Intergenic -2985 NM_000193 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr4-5003 chr4 138267926 138268136 + 9.90 0.000 Intergenic L2a|LINE|L2 -25682 NM_014331 23657 Hs.390594 NM_014331 ENSG00000151012 SLC7A11 CCBR1|xCT solute carrier family 7 member 11 protein-coding chr11-6814 chr11 93479723 93479933 + 9.90 0.000 intron (NM_020179, intron 2 of 2) L2b|LINE|L2 63563 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr21-442 chr21 37450651 37450861 + 9.90 0.000 intron (NM_001347721, intron 2 of 11) intron (NM_001347721, intron 2 of 11) 30457 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr5-2875 chr5 89276858 89277068 + 9.90 0.000 intron (NR_136219, intron 7 of 9) MIRb|SINE|MIR -372858 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr12-2599 chr12 121089107 121089317 + 9.90 0.000 Intergenic Intergenic -43664 NR_033956 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr4-4050 chr4 3207607 3207817 + 9.90 0.000 intron (NM_002111, intron 45 of 66) intron (NM_002111, intron 45 of 66) -36657 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr10-4647 chr10 124947578 124947788 + 9.90 0.000 intron (NM_017580, intron 1 of 8) L2a|LINE|L2 5560 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr8-3483 chr8 100924612 100924822 + 9.90 0.000 intron (NM_001135700, intron 3 of 5) intron (NM_001135700, intron 3 of 5) 25854 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr8-2343 chr8 22271335 22271545 + 9.90 0.000 intron (NR_134293, intron 1 of 1) L1M4|LINE|L1 3722 NR_134293 100507071 Hs.458623 NR_134293 ENSG00000254064 LOC100507071 - uncharacterized LOC100507071 ncRNA chr4-6379 chr4 109994554 109994764 + 9.90 0.000 intron (NM_001357021, intron 16 of 19) intron (NM_001357021, intron 16 of 19) 81776 NM_001178131 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr6-3109 chr6 98008087 98008297 + 9.90 0.000 Intergenic L1PA4|LINE|L1 -16339 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr11-6337 chr11 62851996 62852206 + 9.90 0.000 TTS (NR_000008) TTS (NR_000008) 934 NR_000008 9304 Hs.744737 NR_000008 ENSG00000277194 SNORD22 RNU22|U22 small nucleolar RNA, C/D box 22 snoRNA chr6-5184 chr6 130177963 130178173 + 9.90 0.000 intron (NM_001277185, intron 6 of 10) AluSp|SINE|Alu 37817 NM_001277185 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr6-5294 chr6 141452212 141452422 + 9.90 0.000 Intergenic L1MD3|LINE|L1 636482 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr4-5105 chr4 148716331 148716541 + 9.90 0.000 Intergenic LTR78B|LTR|ERV1 225942 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr4-8285 chr4 142439528 142439738 + 9.90 0.000 intron (NM_001331040, intron 3 of 25) intron (NM_001331040, intron 3 of 25) 406902 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr9-5735 chr9 126535681 126535891 + 9.90 0.000 Intergenic AluSx1|SINE|Alu -78657 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr3-7190 chr3 189235506 189235716 + 9.90 0.000 intron (NM_198485, intron 3 of 5) intron (NM_198485, intron 3 of 5) 4983 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr1-11006 chr1 219626708 219626918 + 9.90 0.000 Intergenic Intergenic -13668 NM_001355457 643136 Hs.647764 NM_001085394 ENSG00000215817 ZC3H11B ZC3HDC11B zinc finger CCCH-type containing 11B protein-coding chr12-7729 chr12 92108684 92108894 + 9.90 0.000 intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 32924 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr3-2944 chr3 57889884 57890094 + 9.90 0.000 promoter-TSS (NM_001311178) promoter-TSS (NM_001311178) -13 NM_001304423 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr2-9098 chr2 204634050 204634260 + 9.90 0.000 intron (NM_205863, intron 1 of 21) L1MA1|LINE|L1 88680 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr2-4711 chr2 231887167 231887377 + 9.90 0.000 Intergenic AluSq2|SINE|Alu 5026 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr12-2395 chr12 31773905 31774115 + 9.90 0.000 Intergenic Intergenic 18288 NM_001013699 440093 Hs.448697 NM_001013699 ENSG00000188375 H3F3C H3.5 H3 histone family member 3C protein-coding chr10-6670 chr10 105806422 105806632 + 9.90 0.000 intron (NR_120625, intron 3 of 3) intron (NR_120625, intron 3 of 3) 13806 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chrX-3287 chrX 103779883 103780093 + 9.90 0.000 intron (NM_001305004, intron 1 of 6) intron (NM_001305004, intron 1 of 6) 3135 NM_001305004 5354 Hs.1787 NM_000533 ENSG00000123560 PLP1 GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2 proteolipid protein 1 protein-coding chr1-6862 chr1 110152503 110152713 + 9.90 0.000 intron (NM_001010898, intron 1 of 11) G-rich|Low_complexity|Low_complexity 2114 NM_001010898 388662 Hs.128382 NM_001010898 ENSG00000197106 SLC6A17 MRT48|NTT4 solute carrier family 6 member 17 protein-coding chr6-6942 chr6 16283936 16284146 + 9.90 0.000 intron (NM_006877, intron 6 of 8) intron (NM_006877, intron 6 of 8) 45454 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr3-6636 chr3 127525930 127526140 + 9.90 0.000 intron (NR_125397, intron 5 of 6) MLT1B|LTR|ERVL-MaLR 11745 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr17-5975 chr17 77218961 77219171 + 9.90 0.000 Intergenic HAL1M8|LINE|L1 33853 NM_001144001 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr16-6167 chr16 24144562 24144772 + 9.90 0.000 intron (NM_002738, intron 9 of 16) intron (NM_002738, intron 9 of 16) -58449 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr2-4654 chr2 190586152 190586362 + 9.90 0.000 Intergenic L2b|LINE|L2 -51535 NM_001142645 100131211 Hs.659824 NM_001142645 ENSG00000189362 NEMP2 TMEM194B nuclear envelope integral membrane protein 2 protein-coding chr5-8508 chr5 133805790 133806000 + 9.90 0.000 Intergenic Intergenic -107782 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr1-13057 chr1 175588625 175588835 + 9.90 0.000 intron (NM_003285, intron 1 of 22) MIRc|SINE|MIR 154865 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr1-10907 chr1 208231894 208232104 + 9.90 0.000 intron (NM_025179, intron 1 of 31) intron (NM_025179, intron 1 of 31) 12385 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr18-1066 chr18 31513663 31513873 + 9.90 0.000 intron (NM_001943, intron 1 of 14) L1MD3|LINE|L1 15591 NM_001943 1829 Hs.412597 NM_001943 ENSG00000046604 DSG2 CDHF5|HDGC desmoglein 2 protein-coding chr4-2527 chr4 46994716 46994926 + 9.90 0.000 Intergenic Intergenic -1240 NM_001204266 2557 Hs.248112 NM_000809 ENSG00000109158 GABRA4 - gamma-aminobutyric acid type A receptor alpha4 subunit protein-coding chr7-3879 chr7 106916755 106916965 + 9.90 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 51381 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr6-3277 chr6 155103090 155103300 + 9.90 0.000 intron (NM_012454, intron 1 of 25) intron (NM_012454, intron 1 of 25) 12906 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr11-7158 chr11 128025864 128026074 + 9.90 0.000 Intergenic LTR16A|LTR|ERVL -182797 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr20-3656 chr20 10312115 10312325 + 9.90 0.000 Intergenic Intergenic -92714 NR_040710 100131208 Hs.658178 NR_040710 ENSG00000227906 SNAP25-AS1 - SNAP25 antisense RNA 1 ncRNA chr2-4994 chr2 216596513 216596723 + 9.90 0.000 intron (NR_110392, intron 2 of 3) L2c|LINE|L2 10320 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr12-5402 chr12 121250936 121251146 + 9.90 0.000 intron (NM_172226, intron 11 of 15) intron (NM_172226, intron 11 of 15) 23544 NM_001270486 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chrX-3259 chrX 82517234 82517444 + 9.90 0.000 Intergenic Intergenic -990951 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr1-5769 chr1 154753866 154754076 + 9.90 0.000 intron (NM_001204087, intron 3 of 8) MIRb|SINE|MIR 105905 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr9-7607 chr9 37265665 37265875 + 9.90 0.000 intron (NM_001289120, intron 2 of 8) intron (NM_001289120, intron 2 of 8) 145172 NM_001289121 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr20-1767 chr20 51446661 51446871 + 9.90 0.000 intron (NM_012340, intron 6 of 10) intron (NM_012340, intron 6 of 10) 6211 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr15-1238 chr15 71103155 71103365 + 9.90 0.000 Intergenic L1MEf|LINE|L1 -38189 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr9-7322 chr9 12204449 12204659 + 9.90 0.000 Intergenic LTR16E1|LTR|ERVL -488831 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr7-6271 chr7 135981556 135981766 + 9.90 0.000 Intergenic MLT1I-int|LTR|ERVL-MaLR -4302 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr14-1770 chr14 96126501 96126711 + 9.90 0.000 Intergenic Intergenic -78192 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr10-3484 chr10 67318611 67318821 + 9.90 0.000 intron (NM_001127384, intron 5 of 17) L2a|LINE|L2 84694 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr11-6902 chr11 106585159 106585369 + 9.90 0.000 Intergenic LTR27D|LTR|ERV1 333857 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr11-3800 chr11 64939919 64940129 + 9.90 0.000 intron (NM_001037225, intron 9 of 10) intron (NM_001037225, intron 9 of 10) -4131 NM_130769 170589 Hs.436119 NM_130769 ENSG00000149735 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone subunit alpha 2 protein-coding chr1-6075 chr1 97335107 97335317 + 9.90 0.000 intron (NM_000110, intron 16 of 22) intron (NM_000110, intron 16 of 22) 239289 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr15-2730 chr15 96849757 96849967 + 9.90 0.000 Intergenic Intergenic 66427 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr7-3041 chr7 109717788 109717998 + 9.90 0.000 Intergenic AluJr|SINE|Alu 242320 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr10-6336 chr10 120124804 120125014 + 9.90 0.000 Intergenic L1MC3|LINE|L1 166396 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr10-2661 chr10 94963955 94964165 + 9.90 0.000 intron (NM_000771, intron 5 of 8) L1PA16|LINE|L1 25402 NM_000771 1559 Hs.282624 NM_000771 ENSG00000138109 CYP2C9 CPC9|CYP2C|CYP2C10|CYPIIC9|P450IIC9 cytochrome P450 family 2 subfamily C member 9 protein-coding chr18-1344 chr18 79855274 79855484 + 9.90 0.000 Intergenic MER20|DNA|hAT-Charlie -8289 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr3-8864 chr3 10166098 10166308 + 9.90 0.000 intron (NM_001570, intron 1 of 12) intron (NM_001570, intron 1 of 12) 1284 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr17-2482 chr17 75752216 75752426 + 9.90 0.000 exon (NM_000213, exon 31 of 40) exon (NM_000213, exon 31 of 40) 12871 NM_000154 2584 Hs.407966 NM_000154 ENSG00000108479 GALK1 GALK|GK1|HEL-S-19 galactokinase 1 protein-coding chr15-5272 chr15 99198176 99198386 + 9.90 0.000 intron (NR_109947, intron 8 of 12) L2|LINE|L2 51300 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding chr13-1162 chr13 35622154 35622364 + 9.90 0.000 intron (NM_001204197, intron 8 of 17) intron (NM_001204197, intron 8 of 17) -75265 NR_132116 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr1-6968 chr1 160767659 160767869 + 9.90 0.000 Intergenic Intergenic -28410 NM_001033667 4063 Hs.403857 NM_002348 ENSG00000122224 LY9 CD229|SLAMF3|hly9|mLY9 lymphocyte antigen 9 protein-coding chr17-3040 chr17 79388587 79388797 + 9.90 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 127456 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr4-3744 chr4 80526684 80526894 + 9.90 0.000 intron (NM_152770, intron 2 of 5) intron (NM_152770, intron 2 of 5) 191069 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr1-1430 chr1 51519225 51519435 + 9.90 0.000 promoter-TSS (NM_001981) promoter-TSS (NM_001981) -64 NM_001981 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding chr8-3488 chr8 101922335 101922545 + 9.90 0.000 intron (NM_001040624, intron 3 of 7) intron (NM_001040624, intron 3 of 7) -61992 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr9-5035 chr9 28736062 28736272 + 9.90 0.000 intron (NM_001354574, intron 2 of 5) intron (NM_001354574, intron 2 of 5) -16862 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr5-5008 chr5 82800044 82800254 + 9.90 0.000 Intergenic Intergenic -40006 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr7-9250 chr7 122222117 122222327 + 9.90 0.000 Intergenic Intergenic -77973 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr22-2844 chr22 44407740 44407950 + 9.90 0.000 Intergenic Intergenic -35482 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 - long intergenic non-protein coding RNA 1656 ncRNA chr12-3475 chr12 120861395 120861605 + 9.90 0.000 intron (NM_139015, intron 1 of 10) intron (NM_139015, intron 1 of 10) 42858 NM_139015 121665 Hs.507087 NM_139015 ENSG00000157837 SPPL3 IMP2|MDHV1887|PRO4332|PSH1|PSL4 signal peptide peptidase like 3 protein-coding chr16-4023 chr16 830579 830789 + 9.90 0.000 Intergenic Intergenic 25241 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr3-1972 chr3 123652548 123652758 + 9.90 0.000 intron (NM_001321309, intron 23 of 32) intron (NM_001321309, intron 23 of 32) -32105 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr8-3787 chr8 25970899 25971109 + 9.90 0.000 intron (NM_022659, intron 6 of 15) AluJr|SINE|Alu 74409 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr14-1681 chr14 77162256 77162466 + 9.90 0.000 Intergenic Intergenic -19437 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding chr2-8746 chr2 161165378 161165588 + 9.90 0.000 intron (NM_001199135, intron 1 of 7) intron (NM_001199135, intron 1 of 7) 5055 NM_001199135 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr5-4675 chr5 38053464 38053674 + 9.90 0.000 intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) 27872 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr11-2701 chr11 118609302 118609512 + 9.90 0.000 intron (NM_001144759, intron 1 of 20) CpG 1792 NM_001144758 23187 Hs.504062 NM_015157 ENSG00000019144 PHLDB1 LL5A pleckstrin homology like domain family B member 1 protein-coding chr1-5560 chr1 242823759 242823969 + 9.90 0.000 Intergenic AluSc8|SINE|Alu 277880 NR_029401 731275 Hs.722350 NR_029401 ENSG00000214837 LINC01347 - long intergenic non-protein coding RNA 1347 ncRNA chr8-1788 chr8 91034638 91034848 + 9.90 0.000 intron (NM_018710, intron 1 of 6) LTR86A1|LTR|ERVL 6116 NM_018710 55529 Hs.202517 NM_018710 ENSG00000155099 PIP4P2 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 protein-coding chr14-2455 chr14 78714397 78714607 + 9.90 0.000 intron (NR_073547, intron 7 of 20) intron (NR_073547, intron 7 of 20) 310783 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr8-4525 chr8 122780974 122781184 + 9.90 0.000 promoter-TSS (NM_014943) promoter-TSS (NM_014943) -576 NM_014943 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr8-2114 chr8 142514068 142514278 + 9.90 0.000 intron (NM_001702, intron 18 of 30) intron (NM_001702, intron 18 of 30) 64524 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr8-6077 chr8 26556886 26557096 + 9.90 0.000 intron (NM_001197293, intron 1 of 13) L1MC2|LINE|L1 -20954 NM_001386 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr16-4005 chr16 325206 325416 + 9.90 0.000 intron (NM_003502, intron 2 of 10) CpG 27412 NR_134879 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr6-2194 chr6 36960621 36960831 + 9.90 0.000 intron (NM_001199159, intron 3 of 7) intron (NM_001199159, intron 3 of 7) 5988 NM_153370 221476 Hs.25391 NM_153370 ENSG00000164530 PI16 CD364|CRISP9|MSMBBP|PSPBP peptidase inhibitor 16 protein-coding chr4-2775 chr4 17236805 17237015 + 9.90 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -50853 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr1-8489 chr1 147878670 147878880 + 9.90 0.000 Intergenic Intergenic -24020 NM_005267 2703 Hs.632441 NM_005267 ENSG00000121634 GJA8 CAE|CAE1|CTRCT1|CX50|CZP1|MP70 gap junction protein alpha 8 protein-coding chr2-8428 chr2 119295646 119295856 + 9.90 0.000 Intergenic Intergenic -46680 NR_046721 100874111 Hs.704682 NR_046721 ENSG00000229867 STEAP3-AS1 - STEAP3 antisense RNA 1 ncRNA chr10-2568 chr10 70307512 70307722 + 9.90 0.000 intron (NM_018205, intron 3 of 3) intron (NM_018205, intron 3 of 3) -23613 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr7-3525 chr7 6459910 6460120 + 9.90 0.000 Intergenic AluY|SINE|Alu -12003 NM_001142936 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr3-7790 chr3 84748929 84749139 + 9.90 0.000 intron (NR_033860, intron 10 of 20) intron (NR_033860, intron 10 of 20) 120541 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr12-2587 chr12 117063750 117063960 + 9.90 0.000 intron (NR_031766, intron 2 of 7) intron (NR_031766, intron 2 of 7) 35561 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr11-1419 chr11 47153121 47153331 + 9.90 0.000 intron (NM_001003677, intron 4 of 8) intron (NM_001003677, intron 4 of 8) 23653 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr1-4048 chr1 203441708 203441918 + 9.90 0.000 Intergenic Intergenic -33993 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr1-8350 chr1 57993677 57993887 + 9.90 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 133201 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr5-1964 chr5 111507566 111507776 + 9.90 0.000 intron (NM_001308058, intron 1 of 4) intron (NM_001308058, intron 1 of 4) -4555 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr17-2873 chr17 32827816 32828026 + 9.90 0.000 intron (NM_015194, intron 1 of 21) intron (NM_015194, intron 1 of 21) 49203 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr2-1695 chr2 164841924 164842134 + 9.90 0.000 promoter-TSS (NM_001278461) promoter-TSS (NM_001278461) 47 NM_001278458 22837 Hs.470457 NM_014900 ENSG00000082438 COBLL1 COBLR1 cordon-bleu WH2 repeat protein like 1 protein-coding chr3-2753 chr3 140400709 140400919 + 9.90 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 107975 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr16-5285 chr16 63132938 63133148 + 9.90 0.000 Intergenic Intergenic -1096605 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr2-5496 chr2 142741102 142741312 + 9.90 0.000 Intergenic MLT2A2|LTR|ERVL -136457 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr2-8966 chr2 189658765 189658975 + 9.90 0.000 Intergenic Intergenic -2529 NM_001353493 110599588 Hs.101364 NM_001353493 ENSG00000286053 ASDURF ASNSD1|ASNSD1-SEP|NS3TP1 ASNSD1 upstream reading frame protein-coding chr8-7290 chr8 131453414 131453624 + 9.90 0.000 Intergenic L1ME1|LINE|L1 -412610 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr15-2902 chr15 43204574 43204784 + 9.90 0.000 intron (NM_001114134, intron 10 of 12) intron (NM_001114134, intron 10 of 12) 16339 NM_000119 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chrX-358 chrX 111507526 111507736 + 9.90 0.000 Intergenic Intergenic -4014 NM_001354473 401613 Hs.98581 NM_001354473 ENSG00000260802 SERTM2 DKFZp686D0853|LINC00890 serine rich and transmembrane domain containing 2 protein-coding chr3-5622 chr3 9933025 9933235 + 9.90 0.000 promoter-TSS (NM_015513) promoter-TSS (NM_015513) -704 NM_001077415 78987 Hs.9383 NM_015513 ENSG00000163703 CRELD1 AVSD2|CIRRIN cysteine rich with EGF like domains 1 protein-coding chr2-4824 chr2 63023508 63023718 + 9.90 0.000 intron (NM_001142615, intron 19 of 22) Tigger16a|DNA|TcMar-Tigger 24098 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr6-7649 chr6 81938539 81938749 + 9.90 0.000 promoter-TSS (NR_149134) promoter-TSS (NR_149134) -223 NR_149134 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr7-9006 chr7 100843748 100843958 + 9.90 0.000 intron (NR_146550, intron 1 of 1) Harlequin-int|LTR|ERV1 8761 NR_146550 105375430 Hs.638778 NR_146550 ENSG00000236305 SLC12A9-AS1 - SLC12A9 antisense RNA 1 ncRNA chr2-4767 chr2 26569176 26569386 + 9.90 0.000 intron (NM_001105519, intron 1 of 3) intron (NM_001105519, intron 1 of 3) 6694 NM_001322426 339778 Hs.407083 NM_001105519 ENSG00000173557 C2orf70 - chromosome 2 open reading frame 70 protein-coding chr1-7298 chr1 242216419 242216629 + 9.90 0.000 intron (NM_001320272, intron 6 of 10) LTR22B1|LTR|ERVK -217426 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr16-2289 chr16 4933304 4933514 + 9.90 0.000 intron (NM_002705, intron 1 of 21) MIRc|SINE|MIR 3739 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr1-5676 chr1 44361758 44361968 + 9.90 0.000 Intergenic Intergenic -6584 NM_001301701 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding chr14-4626 chr14 53456588 53456798 + 9.90 0.000 Intergenic Intergenic 303339 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr15-1208 chr15 49282342 49282552 + 9.90 0.000 intron (NM_001289030, intron 7 of 10) intron (NM_001289030, intron 7 of 10) 112200 NM_002044 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr4-5164 chr4 156085975 156086185 + 9.90 0.000 Intergenic Intergenic -132214 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr11-3297 chr11 95150985 95151195 + 9.90 0.000 non-coding (NR_110303, exon 1 of 3) non-coding (NR_110303, exon 1 of 3) 551 NR_110303 101929295 Hs.735838 NR_110303 ENSG00000245552 LOC101929295 - uncharacterized LOC101929295 ncRNA chr17-2573 chr17 64002260 64002470 + 9.90 0.000 TTS (NM_001099788) TTS (NM_001099788) -2466 NR_126169 400612 Hs.591170 NR_126169 ENSG00000264954 PRR29-AS1 - PRR29 antisense RNA 1 ncRNA chr19-4016 chr19 3742693 3742903 + 9.90 0.000 intron (NM_001267560, intron 14 of 20) AluSx1|SINE|Alu 18894 NM_004886 9546 Hs.25527 NM_004886 ENSG00000011132 APBA3 MGC:15815|X11L2|mint3 amyloid beta precursor protein binding family A member 3 protein-coding chr1-6739 chr1 66623914 66624124 + 9.90 0.000 intron (NM_001350218, intron 1 of 22) intron (NM_001350218, intron 1 of 22) -4421 NR_036060 100422871 NR_036060 ENSG00000264720 MIR3117 mir-3117 microRNA 3117 ncRNA chr10-6131 chr10 133148619 133148829 + 9.90 0.000 Intergenic L1PA14|LINE|L1 -11495 NM_001347865 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr7-3517 chr7 5666503 5666713 + 9.90 0.000 intron (NR_046834, intron 2 of 2) intron (NR_046834, intron 2 of 2) 13853 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr11-7020 chr11 118036892 118037102 + 9.90 0.000 intron (NM_001354434, intron 2 of 5) LTR17|LTR|ERV1 -40015 NR_110734 56649 Hs.161985 NM_019894 ENSG00000137648 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane serine protease 4 protein-coding chr19-2590 chr19 1634386 1634596 + 9.90 0.000 intron (NM_001136139, intron 3 of 19) intron (NM_001136139, intron 3 of 19) 18124 NM_003200 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr3-6954 chr3 162232491 162232701 + 9.90 0.000 Intergenic MER66-int|LTR|ERV1 735788 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr12-7955 chr12 109719222 109719432 + 9.90 0.000 intron (NM_032829, intron 1 of 2) intron (NM_032829, intron 1 of 2) 5502 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr16-3399 chr16 72072044 72072254 + 9.90 0.000 intron (NM_020995, intron 1 of 4) AluSp|SINE|Alu 8923 NM_020995 3250 Hs.655361 NM_020995 ENSG00000261701 HPR A-259H10.2|HP haptoglobin-related protein protein-coding chr21-1161 chr21 42068362 42068572 + 9.90 0.000 intron (NM_001199527, intron 1 of 21) L3|LINE|CR1 -2850 NM_173568 89766 Hs.242520 NM_173568 ENSG00000177398 UMODL1 - uromodulin like 1 protein-coding chr20-3337 chr20 24247312 24247522 + 9.90 0.000 Intergenic Intergenic 47650 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr20-1977 chr20 42036785 42036995 + 9.90 0.000 Intergenic CR1_Mam|LINE|CR1 -418513 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr8-5871 chr8 14863556 14863766 + 9.90 0.000 intron (NM_139167, intron 1 of 7) intron (NM_139167, intron 1 of 7) -10151 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr17-8370 chr17 74550629 74550839 + 9.90 0.000 Intergenic Intergenic -4619 NM_006678 10871 Hs.2605 NM_006678 ENSG00000167850 CD300C CLM-6|CMRF-35|CMRF-35A|CMRF35|CMRF35-A1|CMRF35A|CMRF35A1|IGSF16|LIR CD300c molecule protein-coding chr6-2207 chr6 40887589 40887799 + 9.90 0.000 intron (NR_110873, intron 3 of 5) intron (NR_110873, intron 3 of 5) 135586 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr9-2113 chr9 93948356 93948566 + 9.90 0.000 Intergenic Intergenic 6894 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr16-3172 chr16 81915217 81915427 + 9.90 0.000 intron (NM_002661, intron 19 of 32) L2a|LINE|L2 96148 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr6-4006 chr6 118210782 118210992 + 9.90 0.000 intron (NM_001029858, intron 2 of 7) MLT1B|LTR|ERVL-MaLR 124984 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr3-3725 chr3 185106181 185106391 + 9.90 0.000 intron (NM_001025266, intron 1 of 1) HERVK9-int|LTR|ERVK 46774 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr17-5953 chr17 76416678 76416888 + 9.90 0.000 intron (NM_022066, intron 1 of 17) intron (NM_022066, intron 1 of 17) 31505 NM_001142602 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr5-1196 chr5 72611121 72611331 + 9.90 0.000 intron (NR_105007, intron 1 of 2) intron (NR_105007, intron 1 of 2) 49443 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr1-4703 chr1 244757596 244757806 + 9.90 0.000 Intergenic Intergenic -77605 NM_001312871 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr11-10081 chr11 85333376 85333586 + 9.90 0.000 intron (NM_001142699, intron 3 of 27) L1PA15|LINE|L1 293789 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chrX-2717 chrX 122028842 122029052 + 9.90 0.000 Intergenic L1PA7|LINE|L1 657975 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr9-5322 chr9 87259591 87259801 + 9.90 0.000 Intergenic Intergenic 111052 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr6-6165 chr6 4454883 4455093 + 9.90 0.000 Intergenic Intergenic -33810 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr12-6469 chr12 98893183 98893393 + 9.90 0.000 intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) 1486 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr6-3589 chr6 75557181 75557391 + 9.90 0.000 Intergenic Intergenic -44223 NM_001304792 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding chr2-5436 chr2 120560550 120560760 + 9.90 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -94306 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr17-1617 chr17 79024228 79024438 + 9.90 0.000 5' UTR (NM_030968, exon 1 of 4) 5' UTR (NM_030968, exon 1 of 4) 164 NM_030968 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and TNF related 1 protein-coding chr6-5283 chr6 139240530 139240740 + 9.90 0.000 3' UTR (NM_153235, exon 10 of 10) 3' UTR (NM_153235, exon 10 of 10) 51363 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding chr4-5890 chr4 130686699 130686909 + 9.90 0.000 Intergenic Intergenic 310443 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr15-2453 chr15 78977472 78977682 + 9.90 0.000 intron (NM_001145648, intron 24 of 26) intron (NM_001145648, intron 24 of 26) -1312 NR_148998 100129540 Hs.459035 NR_148998 ENSG00000177699 LOC100129540 - uncharacterized LOC100129540 ncRNA chrX-2650 chrX 112640263 112640473 + 9.90 0.000 intron (NM_178175, intron 3 of 3) L2b|LINE|L2 39570 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr8-5451 chr8 41194516 41194726 + 9.90 0.000 Intergenic Intergenic 76522 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr14-2952 chr14 49280125 49280335 + 9.90 0.000 Intergenic Intergenic 306150 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr15-2773 chr15 33190168 33190378 + 9.90 0.000 intron (NM_001277313, intron 2 of 20) intron (NM_001277313, intron 2 of 20) 4441 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr8-3496 chr8 105576286 105576496 + 9.90 0.000 intron (NM_001362837, intron 4 of 7) intron (NM_001362837, intron 4 of 7) 256848 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr17-4685 chr17 28205320 28205530 + 9.90 0.000 Intergenic L2|LINE|L2 -21138 NR_003064 23615 Hs.157195 NM_021093 ENSG00000237575 PYY2 - peptide YY 2 (pseudogene) pseudo chr22-2564 chr22 27396647 27396857 + 9.90 0.000 Intergenic MIRb|SINE|MIR 86101 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chrX-303 chrX 3713657 3713867 + 9.90 0.000 promoter-TSS (NM_005044) promoter-TSS (NM_005044) -113 NM_005044 5613 Hs.390788 NM_005044 ENSG00000183943 PRKX PKX1 protein kinase X-linked protein-coding chr20-1399 chr20 11529169 11529379 + 9.90 0.000 Intergenic Intergenic -255891 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr1-4496 chr1 22244042 22244252 + 9.90 0.000 Intergenic Intergenic -22092 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr1-15712 chr1 169863768 169863978 + 9.90 0.000 intron (NM_181093, intron 9 of 13) intron (NM_181093, intron 9 of 13) 30023 NM_020423 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr7-2979 chr7 4333379 4333589 + 9.90 0.000 Intergenic AluJo|SINE|Alu -198647 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr17-3759 chr17 31401591 31401801 + 9.90 0.000 intron (NM_032932, intron 1 of 14) intron (NM_032932, intron 1 of 14) 10021 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr3-7073 chr3 177283018 177283228 + 9.90 0.000 Intergenic Intergenic -11319 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr4-2385 chr4 47526396 47526606 + 9.90 0.000 intron (NM_020453, intron 5 of 22) L1M5|LINE|L1 41226 NM_020453 57205 Hs.437241 NM_020453 ENSG00000145246 ATP10D ATPVD ATPase phospholipid transporting 10D (putative) protein-coding chr19-5330 chr19 3600977 3601187 + 9.90 0.000 intron (NM_001060, intron 1 of 2) intron (NM_001060, intron 1 of 2) 5751 NM_001060 6915 Hs.442530 NM_001060 ENSG00000006638 TBXA2R BDPLT13|TXA2-R thromboxane A2 receptor protein-coding chr1-6872 chr1 114219604 114219814 + 9.90 0.000 Intergenic Intergenic -65840 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr10-4758 chr10 3453058 3453268 + 9.90 0.000 intron (NR_155743, intron 3 of 4) intron (NR_155743, intron 3 of 4) 49675 NR_155745 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr9-5292 chr9 84160990 84161200 + 9.90 0.000 Intergenic Intergenic 97652 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr18-2821 chr18 5767251 5767461 + 9.90 0.000 intron (NR_038839, intron 2 of 4) intron (NR_038839, intron 2 of 4) 18537 NR_038839 645355 Hs.632356 NR_038839 ENSG00000261738 MIR3976HG LINC01469 MIR3976 host gene ncRNA chrX-1675 chrX 154095076 154095286 + 9.90 0.000 intron (NM_001369391, intron 1 of 6) intron (NM_001369391, intron 1 of 6) 1788 NM_001369394 4204 Hs.200716 NM_004992 ENSG00000169057 MECP2 AUTSX3|MRX16|MRX79|MRXS13|MRXSL|PPMX|RS|RTS|RTT methyl-CpG binding protein 2 protein-coding chr14-2790 chr14 20904972 20905182 + 9.90 0.000 Intergenic L1M1|LINE|L1 13674 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding ML143361.1-1 ML143361.1 130582 130792 + 9.90 0.000 NA NA NA NA chr11-6946 chr11 112175398 112175608 + 9.90 0.000 promoter-TSS (NM_001256400) promoter-TSS (NM_001256400) -9 NM_001256398 83875 Hs.728325 NM_031938 ENSG00000197580 BCO2 B-DIOX-II|BCDO2 beta-carotene oxygenase 2 protein-coding chr2-9897 chr2 222033524 222033734 + 9.90 0.000 Intergenic Intergenic -264518 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chrX-1537 chrX 39278040 39278250 + 9.90 0.000 Intergenic SVA_D|Retroposon|SVA 49217 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr5-1877 chr5 145946358 145946568 + 9.90 0.000 intron (NM_152550, intron 2 of 9) intron (NM_152550, intron 2 of 9) 9885 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr5-8694 chr5 141958267 141958477 + 9.90 0.000 5' UTR (NM_016580, exon 1 of 4) 5' UTR (NM_016580, exon 1 of 4) 690 NM_016580 51294 Hs.439474 NM_016580 ENSG00000113555 PCDH12 VE-cadherin-2|VECAD2 protocadherin 12 protein-coding chr15-2767 chr15 28890549 28890759 + 9.90 0.000 intron (NM_001353792, intron 1 of 13).2 MIRc|SINE|MIR 4680 NM_001353790 321 Hs.618112 NM_005503 ENSG00000034053 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta precursor protein binding family A member 2 protein-coding chr10-3174 chr10 85545002 85545212 + 9.90 0.000 Intergenic Intergenic -32624 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr3-4689 chr3 49875964 49876174 + 9.90 0.000 Intergenic Intergenic -6163 NM_024046 79012 Hs.145156 NM_024046 ENSG00000164076 CAMKV 1G5|VACAMKL CaM kinase like vesicle associated protein-coding chr9-3828 chr9 129763354 129763564 + 9.90 0.000 Intergenic L3|LINE|CR1 -10417 NM_004878 9536 Hs.146688 NM_004878 ENSG00000148344 PTGES MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1 prostaglandin E synthase protein-coding chr7-4882 chr7 115731109 115731319 + 9.90 0.000 Intergenic Intergenic -149773 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr12-4427 chr12 8742525 8742735 + 9.90 0.000 intron (NR_147950, intron 2 of 8) intron (NR_147950, intron 2 of 8) 44639 NR_147949 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr9-5020 chr9 26712654 26712864 + 9.90 0.000 Intergenic Intergenic 180043 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr4-4325 chr4 32759195 32759405 + 9.90 0.000 Intergenic L1PB3|LINE|L1 408262 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr20-1212 chr20 16308790 16309000 + 9.90 0.000 intron (NM_024704, intron 25 of 25) intron (NM_024704, intron 25 of 25) 264553 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr10-7215 chr10 116380210 116380420 + 9.90 0.000 TTS (NM_198515) TTS (NM_198515) -47532 NM_001011709 119548 Hs.276724 NM_001011709 ENSG00000203837 PNLIPRP3 - pancreatic lipase related protein 3 protein-coding chr1-13973 chr1 25021238 25021448 + 9.90 0.000 Intergenic Intergenic -2160 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr14-3221 chr14 74534577 74534787 + 9.90 0.000 intron (NM_000428, intron 9 of 35) L2b|LINE|L2 40917 NM_194279 122961 Hs.291079 NM_194279 ENSG00000165898 ISCA2 HBLD1|ISA2|MMDS4|c14_5557 iron-sulfur cluster assembly 2 protein-coding chr12-3901 chr12 123059235 123059445 + 9.90 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) -22044 NR_038290 100507091 Hs.683912 NR_038290 ENSG00000251497 PITPNM2-AS1 - PITPNM2 antisense RNA 1 ncRNA chr4-4242 chr4 18012335 18012545 + 9.90 0.000 intron (NR_158566, intron 1 of 5) LTR79|LTR|ERVL 9315 NR_136669 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr6-3687 chr6 157421459 157421669 + 9.90 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 40374 NM_153746 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr5-4992 chr5 81077455 81077665 + 9.90 0.000 intron (NM_006909, intron 5 of 26) L2a|LINE|L2 -116653 NR_105015 102524628 Hs.737159 NR_105015 ENSG00000251450 RASGRF2-AS1 - RASGRF2 antisense RNA 1 ncRNA chr7-6420 chr7 156562033 156562243 + 9.90 0.000 intron (NR_026865, intron 2 of 3) MER47B|DNA|TcMar-Tigger 21647 NR_024119 64433 Hs.404170 NR_024119 ENSG00000279418 LINC00244 C7orf4|NCRNA00244 long intergenic non-protein coding RNA 244 ncRNA chr4-3305 chr4 158073699 158073909 + 9.90 0.000 Intergenic Intergenic -96948 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr12-3962 chr12 10730666 10730876 + 9.90 0.000 Intergenic Intergenic -7448 NM_001145426 8531 Hs.221889 NM_003651 ENSG00000060138 YBX3 CSDA|CSDA1|DBPA|ZONAB Y-box binding protein 3 protein-coding chr17-3314 chr17 63935455 63935665 + 9.90 0.000 Intergenic Intergenic -3229 NM_000626 974 Hs.89575 NM_000626 ENSG00000007312 CD79B AGM6|B29|IGB CD79b molecule protein-coding chr4-2737 chr4 7146117 7146327 + 9.90 0.000 Intergenic Intergenic -42846 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chrX-1324 chrX 132174759 132174969 + 9.90 0.000 Intergenic L2|LINE|L2 43169 NM_021183 57826 Hs.119889 NM_021183 ENSG00000123728 RAP2C - RAP2C, member of RAS oncogene family protein-coding chr10-8541 chr10 93210403 93210613 + 9.90 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 136615 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr15-3394 chr15 88713392 88713602 + 9.90 0.000 Intergenic L2a|LINE|L2 74481 NM_001303236 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr13-1329 chr13 29573192 29573402 + 9.90 0.000 intron (NM_003045, intron 1 of 12) intron (NM_003045, intron 1 of 12) 22391 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr20-3282 chr20 7214518 7214728 + 9.90 0.000 intron (NR_110609, intron 3 of 7) L1M1|LINE|L1 39579 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA chr6-5020 chr6 110492117 110492327 + 9.90 0.000 Intergenic MER110A|LTR|ERV1 -15609 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr8-4427 chr8 109801078 109801288 + 9.90 0.000 Intergenic Intergenic -109392 NM_001099744 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr7-9125 chr7 108094966 108095176 + 9.90 0.000 intron (NM_001318048, intron 12 of 17) MER63B|DNA|hAT-Blackjack 35290 NM_001318047 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr7-4937 chr7 135160866 135161076 + 9.90 0.000 intron (NM_018295, intron 1 of 1) intron (NM_018295, intron 1 of 1) 8503 NM_001243755 78996 Hs.643113 NM_024033 ENSG00000122783 CYREN C7orf49|MRI|MRI-2 cell cycle regulator of NHEJ protein-coding chr15-2832 chr15 40190659 40190869 + 9.90 0.000 intron (NM_001211, intron 8 of 22) MER44C|DNA|TcMar-Tigger -26664 NM_001128629 106821730 Hs.732375 NM_001128628 ENSG00000259288 BUB1B-PAK6 PAK-5|PAK-6|PAK5|PAK6 BUB1B-PAK6 readthrough protein-coding chr4-4737 chr4 94200052 94200262 + 9.90 0.000 intron (NR_125922, intron 1 of 8) AluJo|SINE|Alu 7399 NR_125922 101929210 Hs.518877 NR_125922 ENSG00000246541 LOC101929210 - uncharacterized LOC101929210 ncRNA chr7-6358 chr7 150003966 150004176 + 9.90 0.000 intron (NM_001351028, intron 6 of 9) (GT)n|Simple_repeat|Simple_repeat -37284 NR_148939 100134040 Hs.552781 NR_148939 LOC100134040 - uncharacterized LOC100134040 ncRNA chr18-2601 chr18 23068787 23068997 + 9.90 0.000 Intergenic L2c|LINE|L2 -65672 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr11-5894 chr11 12688540 12688750 + 9.90 0.000 intron (NM_021961, intron 2 of 12) MIR|SINE|MIR 14224 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr1-8429 chr1 92990174 92990384 + 9.90 0.000 Intergenic AluJb|SINE|Alu -28757 NM_001252270 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr11-6903 chr11 106587505 106587715 + 9.90 0.000 Intergenic L1ME1|LINE|L1 336203 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr12-3307 chr12 79352833 79353043 + 9.90 0.000 intron (NM_001291901, intron 7 of 9) intron (NM_001291901, intron 7 of 9) -66319 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr2-14157 chr2 203918317 203918527 + 9.90 0.000 Intergenic LTR33|LTR|ERVL -18326 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr6-2918 chr6 17593103 17593313 + 9.90 0.000 Intergenic MER5A|DNA|hAT-Charlie -7094 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr4-4517 chr4 64769087 64769297 + 9.90 0.000 Intergenic ERVL-E-int|LTR|ERVL 235308 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr1-10194 chr1 112338538 112338748 + 9.90 0.000 Intergenic Intergenic -57571 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr20-2411 chr20 20450614 20450824 + 9.90 0.000 intron (NM_020343, intron 37 of 39) intron (NM_020343, intron 37 of 39) 82615 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr3-6120 chr3 54015938 54016148 + 9.90 0.000 Intergenic Intergenic -106509 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr17-7496 chr17 16728114 16728324 + 9.90 0.000 intron (NR_130142, intron 9 of 15) AluJr|SINE|Alu 37978 NR_130142 9720 Hs.745246 NM_014695 ENSG00000170160 CCDC144A - coiled-coil domain containing 144A protein-coding chr22-2014 chr22 32431716 32431926 + 9.90 0.000 intron (NM_174932, intron 10 of 14) intron (NM_174932, intron 10 of 14) -19574 NM_014306 51493 Hs.474643 NM_014306 ENSG00000100220 RTCB C22orf28|DJ149A16.6|FAAP|HSPC117 RNA 2',3'-cyclic phosphate and 5'-OH ligase protein-coding chr19-1703 chr19 19494696 19494906 + 9.90 0.000 intron (NM_001359631, intron 5 of 10) intron (NM_001359631, intron 5 of 10) 20747 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr7-6266 chr7 135491425 135491635 + 9.90 0.000 intron (NM_013316, intron 1 of 10) L2|LINE|L2 18572 NM_013316 4850 Hs.490224 NM_013316 ENSG00000080802 CNOT4 CLONE243|NOT4|NOT4H CCR4-NOT transcription complex subunit 4 protein-coding chr10-5238 chr10 64999013 64999223 + 9.90 0.000 Intergenic ERVL-E-int|LTR|ERVL -74600 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA chr2-11935 chr2 25302321 25302531 + 9.90 0.000 intron (NR_135490, intron 2 of 23) intron (NR_135490, intron 2 of 23) 26295 NR_031570 100302246 NR_031570 ENSG00000221445 MIR1301 MIRN1301|hsa-mir-1301|mir-1301 microRNA 1301 ncRNA chr20-1455 chr20 62094118 62094328 + 9.90 0.000 Intergenic Intergenic -28252 NM_144703 149986 Hs.105379 NM_144703 ENSG00000149657 LSM14B C20orf40|FAM61B|FT005|LSM13|RAP55B|bA11M20.3 LSM family member 14B protein-coding chr8-1916 chr8 37938810 37939020 + 9.90 0.000 intron (NM_152413, intron 1 of 8) intron (NM_152413, intron 1 of 8) 1209 NM_152413 137362 Hs.380740 NM_152413 ENSG00000169154 GOT1L1 - glutamic-oxaloacetic transaminase 1 like 1 protein-coding chr15-2159 chr15 77812103 77812313 + 9.90 0.000 intron (NM_001301186, intron 1 of 5) intron (NM_001301186, intron 1 of 5) 7244 NM_001301194 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr2-9385 chr2 230825795 230826005 + 9.90 0.000 Intergenic AluJb|SINE|Alu -38285 NM_001287241 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr10-3106 chr10 27742289 27742499 + 9.90 0.000 intron (NM_001242702, intron 2 of 6) CpG-2760 -2221 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr15-2366 chr15 40856190 40856400 + 9.90 0.000 exon (NM_003710, exon 10 of 11) exon (NM_003710, exon 10 of 11) -11771 NR_146468 102724362 Hs.569458 NR_146466 ENSG00000261183 SPINT1-AS1 - SPINT1 antisense RNA 1 ncRNA chr4-4863 chr4 113553371 113553581 + 9.90 0.000 intron (NM_001221, intron 4 of 18) intron (NM_001221, intron 4 of 18) 208262 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr17-3448 chr17 31857928 31858138 + 9.90 0.000 intron (NM_018405, intron 1 of 3) intron (NM_018405, intron 1 of 3) 929 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr12-3474 chr12 120763232 120763442 + 9.90 0.000 3' UTR (NM_139015, exon 11 of 11) 3' UTR (NM_139015, exon 11 of 11) 37511 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr6-2417 chr6 156779403 156779613 + 9.90 0.000 TTS (NR_039676) TTS (NR_039676) 223 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr14-4080 chr14 64733491 64733701 + 9.90 0.000 intron (NM_001308147, intron 12 of 16) intron (NM_001308147, intron 12 of 16) 29172 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr4-3643 chr4 19409404 19409614 + 9.90 0.000 Intergenic AluSx1|SINE|Alu -842396 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr17-8010 chr17 49848567 49848777 + 9.90 0.000 promoter-TSS (NM_001077503) promoter-TSS (NM_001077503) -655 NM_001077506 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr10-9236 chr10 133195653 133195863 + 9.90 0.000 exon (NM_152643, exon 10 of 30) exon (NM_152643, exon 10 of 30) -34459 NM_003577 8433 Hs.458406 NM_003577 ENSG00000171794 UTF1 - undifferentiated embryonic cell transcription factor 1 protein-coding chr19-4733 chr19 21117155 21117365 + 9.90 0.000 exon (NM_182515, exon 5 of 5) exon (NM_182515, exon 5 of 5) -24780 NM_001319126 170959 Hs.156256 NM_133473 ENSG00000196705 ZNF431 - zinc finger protein 431 protein-coding chr9-4274 chr9 104104468 104104678 + 9.90 0.000 intron (NM_001042550, intron 9 of 24) MER70A|LTR|ERVL 9946 NM_001042550 10592 Hs.119023 NM_006444 ENSG00000136824 SMC2 CAP-E|CAPE|SMC-2|SMC2L1 structural maintenance of chromosomes 2 protein-coding chr22-1797 chr22 32030773 32030983 + 9.90 0.000 intron (NR_149128, intron 4 of 4) MIRb|SINE|MIR -12383 NM_000343 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr11-5040 chr11 92492074 92492284 + 9.90 0.000 intron (NM_001008781, intron 1 of 24) intron (NM_001008781, intron 1 of 24) 140083 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr1-6263 chr1 240663466 240663676 + 9.90 0.000 Intergenic MIR|SINE|MIR -51416 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr5-6785 chr5 90402588 90402798 + 9.90 0.000 intron (NM_001297765, intron 3 of 5) MER58A|DNA|hAT-Charlie 7093 NM_001297768 1070 Hs.591767 NM_004365 ENSG00000153140 CETN3 CDC31|CEN3 centrin 3 protein-coding chr10-2552 chr10 67046951 67047161 + 9.90 0.000 intron (NR_111909, intron 2 of 2) intron (NR_111909, intron 2 of 2) 34790 NR_111909 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr5-2605 chr5 130105499 130105709 + 9.90 0.000 intron (NM_175856, intron 2 of 2) intron (NM_175856, intron 2 of 2) 201139 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr16-4539 chr16 64625568 64625778 + 9.90 0.000 Intergenic L1PB3|LINE|L1 496390 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr19-3110 chr19 11256319 11256529 + 9.90 0.000 intron (NM_001367830, intron 1 of 48) intron (NM_001367830, intron 1 of 48) 6100 NM_020812 57572 Hs.591002 NM_020812 ENSG00000130158 DOCK6 AOS2|ZIR1 dedicator of cytokinesis 6 protein-coding chr8-2512 chr8 21074703 21074913 + 9.90 0.000 Intergenic Intergenic 100822 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LINC02153 - long intergenic non-protein coding RNA 2153 ncRNA chr1-10258 chr1 119003958 119004168 + 9.90 0.000 Intergenic Intergenic -2658 NR_135035 105378933 Hs.599652 NR_135034 ENSG00000226172 LOC105378933 - uncharacterized LOC105378933 ncRNA chr7-6155 chr7 125922151 125922361 + 9.90 0.000 Intergenic HERVH-int|LTR|ERV1 -657965 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr11-5668 chr11 128838395 128838605 + 9.90 0.000 3' UTR (NM_153767, exon 4 of 4) 3' UTR (NM_153767, exon 4 of 4) 3969 NM_000220 3758 Hs.527830 NM_000220 ENSG00000151704 KCNJ1 KIR1.1|ROMK|ROMK1 potassium voltage-gated channel subfamily J member 1 protein-coding chr15-2492 chr15 100944314 100944524 + 9.90 0.000 intron (NM_024652, intron 2 of 33) intron (NM_024652, intron 2 of 33) 25062 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chrX-2362 chrX 66317315 66317525 + 9.90 0.000 Intergenic Intergenic 149670 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr15-3198 chr15 71575701 71575911 + 9.90 0.000 intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 28570 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr1-15820 chr1 178872835 178873045 + 9.90 0.000 intron (NM_152663, intron 8 of 19) L2|LINE|L2 -1863 NM_004673 9068 Hs.591474 NM_004673 ENSG00000116194 ANGPTL1 ANG3|ANGPT3|ARP1|AngY|UNQ162|dJ595C2.2 angiopoietin like 1 protein-coding chr1-3066 chr1 16494494 16494704 + 9.90 0.000 Intergenic AluSx1|SINE|Alu -1898 NR_023386 114819 Hs.597881 NR_023386 ENSG00000080947 CROCCP3 CROCCL2|dJ798A10.2 CROCC pseudogene 3 pseudo chr16-2056 chr16 70713691 70713901 + 9.90 0.000 intron (NM_001351157, intron 13 of 17) FLAM_C|SINE|Alu -27743 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr3-3826 chr3 24791808 24792018 + 9.90 0.000 Intergenic Intergenic -37410 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr7-9649 chr7 151258071 151258281 + 9.90 0.000 intron (NM_003078, intron 2 of 13) L2a|LINE|L2 -9482 NM_001003801 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr13-2661 chr13 82571653 82571863 + 9.90 0.000 Intergenic LTR8|LTR|ERV1 1310635 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr5-5190 chr5 112014922 112015132 + 9.90 0.000 intron (NR_046678, intron 3 of 3) intron (NR_046678, intron 3 of 3) -38095 NM_001142475 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr1-14471 chr1 47696682 47696892 + 9.90 0.000 Intergenic Intergenic -259470 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr10-4410 chr10 61325235 61325445 + 9.90 0.000 Intergenic Intergenic -127299 NR_120643 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr19-5192 chr19 16125468 16125678 + 9.90 0.000 intron (NM_005370, intron 4 of 7) intron (NM_005370, intron 4 of 7) -8455 NM_032855 84941 Hs.631617 NM_032855 ENSG00000196684 HSH2D ALX|HSH2 hematopoietic SH2 domain containing protein-coding chr4-7315 chr4 54962786 54962996 + 9.90 0.000 Intergenic Intergenic 162704 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr2-14343 chr2 218256852 218257062 + 9.90 0.000 Intergenic Intergenic -2539 NM_001321950 151306 Hs.160954 NM_170699 ENSG00000179921 GPBAR1 BG37|GPCR19|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding chr3-4926 chr3 195621010 195621220 + 9.90 0.000 Intergenic (TAA)n|Simple_repeat|Simple_repeat 31044 NR_136185 105374297 Hs.655175 NR_136185 LOC105374297 - uncharacterized LOC105374297 ncRNA chr13-2844 chr13 108987505 108987715 + 9.90 0.000 intron (NM_015011, intron 20 of 34) intron (NM_015011, intron 20 of 34) 179693 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr13-1539 chr13 28182022 28182232 + 9.90 0.000 intron (NM_175854, intron 4 of 18) intron (NM_175854, intron 4 of 18) -42953 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr4-4092 chr4 4920218 4920428 + 9.90 0.000 promoter-TSS (NR_125893) promoter-TSS (NR_125893) -485 NR_125893 101928306 Hs.543743 NR_125893 LOC101928306 - uncharacterized LOC101928306 ncRNA chr22-4247 chr22 47345651 47345861 + 9.90 0.000 intron (NR_144462, intron 1 of 3) intron (NR_144462, intron 1 of 3) 185 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr1-14611 chr1 54796136 54796346 + 9.90 0.000 intron (NM_001114108, intron 1 of 6) intron (NM_001114108, intron 1 of 6) 5082 NM_001114108 55001 Hs.16230 NM_017904 ENSG00000006555 TTC22 - tetratricopeptide repeat domain 22 protein-coding chr8-4111 chr8 70539386 70539596 + 9.90 0.000 Intergenic AluJr|SINE|Alu 68178 NM_001317805 23471 Hs.491988 NM_014294 ENSG00000067167 TRAM1 PNAS8|TRAM|TRAMP translocation associated membrane protein 1 protein-coding chr4-1741 chr4 84643945 84644155 + 9.90 0.000 intron (NM_001263, intron 11 of 12) L2b|LINE|L2 60923 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr12-5553 chr12 959783 959993 + 9.90 0.000 intron (NM_001297419, intron 1 of 11) MER57E1|LTR|ERV1 -10166 NM_001297421 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr1-10139 chr1 105417451 105417661 + 9.90 0.000 Intergenic THE1B|LTR|ERVL-MaLR 201379 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr6-1998 chr6 17418542 17418752 + 9.90 0.000 intron (NM_006366, intron 1 of 12) intron (NM_006366, intron 1 of 12) 25052 NM_006366 10486 Hs.132902 NM_006366 ENSG00000112186 CAP2 - cyclase associated actin cytoskeleton regulatory protein 2 protein-coding chr4-2276 chr4 186266813 186267023 + 9.90 0.000 intron (NM_000128, intron 1 of 14) intron (NM_000128, intron 1 of 14) 729 NM_001354804 2160 Hs.1430 NM_000128 ENSG00000088926 F11 FXI|PTA coagulation factor XI protein-coding chr4-3070 chr4 145545746 145545956 + 9.90 0.000 intron (NM_005900, intron 4 of 6) intron (NM_005900, intron 4 of 6) -28657 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA chr7-4258 chr7 2142946 2143156 + 9.90 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -53999 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr12-5325 chr12 114074099 114074309 + 9.90 0.000 Intergenic Intergenic -107879 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr2-3651 chr2 159098598 159098808 + 9.90 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -88132 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr6-1209 chr6 41602986 41603196 + 9.90 0.000 TTS (NM_001012426) TTS (NM_001012426) 4368 NR_039784 100616178 NR_039784 ENSG00000266494 MIR4641 - microRNA 4641 ncRNA chr3-4837 chr3 143976282 143976492 + 9.90 0.000 intron (NM_001134470, intron 1 of 2) intron (NM_001134470, intron 1 of 2) 3306 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr13-1610 chr13 46379843 46380053 + 9.90 0.000 intron (NM_025113, intron 1 of 14) intron (NM_025113, intron 1 of 14) 7304 NM_001286764 80183 Hs.98117 NM_025113 ENSG00000102445 RUBCNL C13orf18|KIAA0226L|PACER rubicon like autophagy enhancer protein-coding chr3-7046 chr3 173546754 173546964 + 9.90 0.000 intron (NM_014932, intron 2 of 6) intron (NM_014932, intron 2 of 6) -37575 NM_001365928 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr11-6565 chr11 71527865 71528075 + 9.90 0.000 3' UTR (NM_001012503, exon 1 of 1) 3' UTR (NM_001012503, exon 1 of 1) 703 NM_001012503 440050 Hs.710675 NM_001012503 ENSG00000244411 KRTAP5-7 KRTAP5-3|KRTAP5.7 keratin associated protein 5-7 protein-coding chr20-860 chr20 63401523 63401733 + 9.90 0.000 3' UTR (NM_172108, exon 16 of 16) 3' UTR (NM_172108, exon 16 of 16) -40232 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr6-1736 chr6 42292097 42292307 + 9.90 0.000 intron (NM_001297573, intron 4 of 17) intron (NM_001297573, intron 4 of 17) -74341 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr11-8094 chr11 41226553 41226763 + 9.90 0.000 intron (NM_001258419, intron 1 of 6) L2|LINE|L2 232978 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr14-4439 chr14 33021098 33021308 + 9.90 0.000 intron (NM_001165893, intron 1 of 10) (ATC)n|Simple_repeat|Simple_repeat 82324 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr16-3098 chr16 67571761 67571971 + 9.90 0.000 intron (NM_001191022, intron 2 of 9) intron (NM_001191022, intron 2 of 9) 1093 NM_001363916 10664 Hs.368367 NM_006565 ENSG00000102974 CTCF MRD21 CCCTC-binding factor protein-coding chr13-1047 chr13 100633540 100633750 + 9.90 0.000 intron (NM_001079669, intron 11 of 17) Tigger3a|DNA|TcMar-Tigger 41150 NM_001350572 84899 Hs.190983 NM_032813 ENSG00000125247 TMTC4 - transmembrane O-mannosyltransferase targeting cadherins 4 protein-coding chr15-2579 chr15 58498751 58498961 + 9.90 0.000 promoter-TSS (NR_120338) promoter-TSS (NR_120338) -121 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr10-1817 chr10 127095777 127095987 + 9.90 0.000 intron (NM_001290223, intron 23 of 51) intron (NM_001290223, intron 23 of 51) 100709 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chrX-589 chrX 111728176 111728386 + 9.90 0.000 exon (NM_001324292, exon 19 of 26) exon (NM_001324292, exon 19 of 26) 46624 NM_001257239 79868 Hs.443061 NM_018466 ENSG00000101901 ALG13 CDG1S|CXorf45|EIEE36|GLT28D1|MDS031|TDRD13|YGL047W ALG13 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr12-2836 chr12 125709982 125710192 + 9.90 0.000 Intergenic Intergenic 87635 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr6-4047 chr6 132652938 132653148 + 9.90 0.000 Intergenic Intergenic -7017 NM_138327 134864 Hs.375030 NM_138327 ENSG00000146399 TAAR1 TA1|TAR1|TRAR1 trace amine associated receptor 1 protein-coding chr2-8308 chr2 105545884 105546094 + 9.90 0.000 Intergenic Intergenic 64570 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chr5-8897 chr5 155981561 155981771 + 9.90 0.000 Intergenic Intergenic -345091 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr2-6574 chr2 225100956 225101166 + 9.90 0.000 Intergenic L1MEf|LINE|L1 -58593 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr22-2099 chr22 23632460 23632670 + 9.90 0.000 promoter-TSS (NM_016449) promoter-TSS (NM_016449) -244 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr16-2625 chr16 3637436 3637646 + 9.90 0.000 Intergenic L1MCa|LINE|L1 -15398 NM_005223 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr3-1182 chr3 184249554 184249764 + 9.90 0.000 promoter-TSS (NR_024534) promoter-TSS (NR_024534) 2 NM_032331 110599564 Hs.146161 NM_032331 ENSG00000284753 EEF1AKMT4 - EEF1A lysine methyltransferase 4 protein-coding chr1-9853 chr1 64843099 64843309 + 9.90 0.000 intron (NM_002227, intron 17 of 24) intron (NM_002227, intron 17 of 24) 98129 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr19-4837 chr19 37397635 37397845 + 9.90 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 26641 NM_032453 84503 Hs.590940 NM_032453 ENSG00000189164 ZNF527 - zinc finger protein 527 protein-coding chr1-15756 chr1 173003236 173003446 + 9.90 0.000 Intergenic AluJb|SINE|Alu 47622 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr16-4532 chr16 63568214 63568424 + 9.90 0.000 Intergenic Intergenic -1531881 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr6-1873 chr6 73585459 73585669 + 9.90 0.000 Intergenic Intergenic -64532 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr7-5930 chr7 99415014 99415224 + 9.90 0.000 intron (NM_001370410, intron 3 of 5) LTR13|LTR|ERVK 5947 NR_162133 113219453 NR_162133 MIR12119 - microRNA 12119 ncRNA chr10-4834 chr10 13388083 13388293 + 9.90 0.000 Intergenic Intergenic -39890 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr1-10587 chr1 175813208 175813418 + 9.90 0.000 Intergenic L1PA13|LINE|L1 -64030 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr14-4622 chr14 53278020 53278230 + 9.90 0.000 Intergenic HERVL18-int|LTR|ERVL 124771 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr11-3008 chr11 128796209 128796419 + 9.90 0.000 intron (NM_001167681, intron 6 of 9) intron (NM_001167681, intron 6 of 9) 46155 NM_000220 3758 Hs.527830 NM_000220 ENSG00000151704 KCNJ1 KIR1.1|ROMK|ROMK1 potassium voltage-gated channel subfamily J member 1 protein-coding chr6-3830 chr6 37434096 37434306 + 9.90 0.000 intron (NM_015050, intron 1 of 23) intron (NM_015050, intron 1 of 23) 980 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr12-6377 chr12 66190869 66191079 + 9.90 0.000 intron (NM_001142523, intron 1 of 10) intron (NM_001142523, intron 1 of 10) 1760 NM_007199 11213 Hs.369265 NM_007199 ENSG00000090376 IRAK3 ASRT5|IRAKM interleukin 1 receptor associated kinase 3 protein-coding chr3-8720 chr3 191990640 191990850 + 9.90 0.000 Intergenic L1PBa1|LINE|L1 -247885 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr19-4803 chr19 35118655 35118865 + 9.90 0.000 intron (NM_001136007, intron 3 of 10) intron (NM_001136007, intron 3 of 10) 2932 NM_001136010 5349 Hs.301350 NM_005971 ENSG00000089356 FXYD3 MAT8|PLML FXYD domain containing ion transport regulator 3 protein-coding chr19-3314 chr19 5073471 5073681 + 9.90 0.000 intron (NM_001370094, intron 7 of 10) intron (NM_001370094, intron 7 of 10) 104463 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr2-4675 chr2 207240071 207240281 + 9.90 0.000 intron (NR_146555, intron 1 of 2) intron (NR_146555, intron 1 of 2) 365 NR_146555 105373853 Hs.678559 NR_146555 ENSG00000229647 MYOSLID - myocardin-induced smooth muscle lncRNA, inducer of differentiation ncRNA chr15-4426 chr15 44979559 44979769 + 9.90 0.000 TTS (NM_152448) TTS (NM_152448) 22977 NM_152448 145645 Hs.567701 NM_152448 ENSG00000167014 TERB2 C15orf43 telomere repeat binding bouquet formation protein 2 protein-coding chr21-1942 chr21 45724538 45724748 + 9.90 0.000 intron (NM_001348238, intron 2 of 16) intron (NM_001348238, intron 2 of 16) -23371 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr9-5400 chr9 93678305 93678515 + 9.90 0.000 3' UTR (NM_005392, exon 22 of 22) 3' UTR (NM_005392, exon 22 of 22) 83569 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr17-5545 chr17 44053475 44053685 + 9.90 0.000 intron (NM_001369486, intron 1 of 3) intron (NM_001369486, intron 1 of 3) 13091 NM_001371445 chr4-5286 chr4 175949526 175949736 + 9.90 0.000 intron (NR_048571, intron 1 of 5) intron (NR_048571, intron 1 of 5) 53060 NM_001261447 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr2-9187 chr2 215773142 215773352 + 9.90 0.000 intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 55204 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr2-11145 chr2 141905306 141905516 + 9.90 0.000 intron (NM_018557, intron 1 of 90) L2a|LINE|L2 226290 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr1-9677 chr1 50260145 50260355 + 9.90 0.000 Intergenic Intergenic 150417 NM_001324217 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding chr11-5419 chr11 68689746 68689956 + 9.90 0.000 intron (NM_015973, intron 5 of 5) intron (NM_015973, intron 5 of 5) 5307 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr21-334 chr21 45451177 45451387 + 9.90 0.000 intron (NM_130445, intron 2 of 42) LTR87|LTR|ERVL? -4240 NM_030582 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr7-1521 chr7 43582850 43583060 + 9.90 0.000 promoter-TSS (NM_004760) promoter-TSS (NM_004760) -153 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr10-1795 chr10 89466550 89466760 + 9.90 0.000 intron (NR_120614, intron 2 of 2) MER102b|DNA|hAT-Charlie 10664 NR_120614 101926906 Hs.568874 NR_120614 ENSG00000234452 SLC16A12-AS1 - SLC16A12 antisense RNA 1 ncRNA chr16-5435 chr16 1108410 1108620 + 9.90 0.000 Intergenic Intergenic -12271 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr18-641 chr18 31468834 31469044 + 9.90 0.000 intron (NM_001944, intron 11 of 15) MSTD|LTR|ERVL-MaLR 21198 NM_001944 1830 Hs.1925 NM_001944 ENSG00000134757 DSG3 CDHF6|PVA desmoglein 3 protein-coding chr3-5567 chr3 5352700 5352910 + 9.90 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -102550 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr3-5568 chr3 5367908 5368118 + 9.90 0.000 Intergenic MIR|SINE|MIR -117758 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr21-572 chr21 46006793 46007003 + 9.90 0.000 Intergenic Intergenic 25149 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr7-8214 chr7 32326453 32326663 + 9.90 0.000 intron (NM_001322059, intron 1 of 17) L2-3_Crp|LINE|L2 -27230 NM_001322058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr3-6438 chr3 103201044 103201254 + 9.90 0.000 Intergenic Intergenic 322967 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr4-4932 chr4 124610536 124610746 + 9.90 0.000 Intergenic Intergenic -52207 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr6-3919 chr6 74534979 74535189 + 9.90 0.000 intron (NR_110856, intron 2 of 3) intron (NR_110856, intron 2 of 3) 465633 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr12-940 chr12 46372772 46372982 + 9.90 0.000 promoter-TSS (NM_018976) promoter-TSS (NM_018976) -104 NM_018976 54407 Hs.221847 NM_018976 ENSG00000134294 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38 member 2 protein-coding chr19-1800 chr19 995023 995233 + 9.90 0.000 TTS (NM_024100) TTS (NM_024100) -5291 NM_138690 116444 Hs.660378 NM_138690 ENSG00000116032 GRIN3B GluN3B|NR3B glutamate ionotropic receptor NMDA type subunit 3B protein-coding chr7-4518 chr7 1149723 1149933 + 9.90 0.000 3' UTR (NM_001365383, exon 6 of 6) 3' UTR (NM_001365383, exon 6 of 6) 10368 NM_001365383 90637 Hs.648111 NM_182491 ENSG00000178381 ZFAND2A AIRAP zinc finger AN1-type containing 2A protein-coding chr1-3507 chr1 156495751 156495961 + 9.90 0.000 intron (NM_005920, intron 1 of 11) intron (NM_005920, intron 1 of 11) 4919 NM_005920 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr19-3062 chr19 2676699 2676909 + 9.78 0.000 intron (NM_052847, intron 1 of 4) intron (NM_052847, intron 1 of 4) 25890 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr3-2483 chr3 141240466 141240676 + 9.78 0.000 intron (NM_152282, intron 3 of 7) MLT1J1|LTR|ERVL-MaLR 8746 NM_001037172 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr16-3130 chr16 72372611 72372821 + 9.78 0.000 intron (NR_126330, intron 7 of 13) intron (NR_126330, intron 7 of 13) -200266 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr4-3718 chr4 72975115 72975325 + 9.78 0.000 Intergenic Intergenic 94496 NM_173827 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding chr4-2914 chr4 87353580 87353790 + 9.78 0.000 intron (NM_016245, intron 5 of 6) intron (NM_016245, intron 5 of 6) -30803 NM_001136230 345275 Hs.284414 NM_178135 ENSG00000170509 HSD17B13 HMFN0376|NIIL497|SCDR9|SDR16C3 hydroxysteroid 17-beta dehydrogenase 13 protein-coding chr13-2605 chr13 75226914 75227124 + 9.78 0.000 Intergenic Intergenic 13362 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr1-14119 chr1 31394845 31395055 + 9.78 0.000 Intergenic MIR3|SINE|MIR -14827 NM_001199038 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr17-4683 chr17 27783644 27783854 + 9.78 0.000 intron (NM_000625, intron 5 of 26) MIRb|SINE|MIR 16780 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr9-7749 chr9 75636348 75636558 + 9.78 0.000 Intergenic Intergenic -254191 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr10-4043 chr10 25111545 25111755 + 9.78 0.000 Intergenic Intergenic -1408 NR_120649 101929025 Hs.553324 NR_120649 ENSG00000231422 LINC01516 - long intergenic non-protein coding RNA 1516 ncRNA chrX-3647 chrX 99272385 99272595 + 9.78 0.000 Intergenic Intergenic 1137783 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr7-4382 chr7 77475167 77475377 + 9.78 0.000 Intergenic (GAAG)n|Simple_repeat|Simple_repeat -58923 NM_001350897 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr2-7629 chr2 27102822 27103032 + 9.78 0.000 intron (NM_006569, intron 2 of 5) intron (NM_006569, intron 2 of 5) 16155 NM_000221 3795 Hs.567297 NM_000221 ENSG00000138030 KHK - ketohexokinase protein-coding chr6-4453 chr6 35017917 35018127 + 9.78 0.000 exon (NM_015245, exon 11 of 24) exon (NM_015245, exon 11 of 24) 123317 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr12-2871 chr12 15279204 15279414 + 9.78 0.000 Intergenic Intergenic -43199 NM_002848 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr1-11391 chr1 48908279 48908489 + 9.78 0.000 intron (NM_001323575, intron 5 of 12) intron (NM_001323575, intron 5 of 12) -131415 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr6-2690 chr6 27053388 27053598 + 9.78 0.000 Intergenic (AGAA)n|Simple_repeat|Simple_repeat -33187 NR_026776 100270746 Hs.590428 NR_026776 LOC100270746 - uncharacterized LOC100270746 ncRNA chr5-1588 chr5 698368 698578 + 9.78 0.000 Intergenic THE1B|LTR|ERVL-MaLR -5121 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr7-5849 chr7 88544390 88544600 + 9.78 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -215205 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chr7-4122 chr7 54155970 54156180 + 9.78 0.000 Intergenic Intergenic -174622 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr10-5592 chr10 92728483 92728693 + 9.78 0.000 Intergenic MER20|DNA|hAT-Charlie 38633 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr11-5080 chr11 114200479 114200689 + 9.78 0.000 intron (NM_006006, intron 4 of 6) MIRb|SINE|MIR -95229 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr1-4437 chr1 234772379 234772589 + 9.78 0.000 Intergenic Intergenic -12428 NR_148962 100130249 Hs.617350 NR_148962 ENSG00000279261 PP2672 - uncharacterized LOC100130249 ncRNA chr2-8907 chr2 180781755 180781965 + 9.78 0.000 intron (NR_104324, intron 3 of 4) intron (NR_104324, intron 3 of 4) 89756 NR_104319 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr10-4112 chr10 69723880 69724090 + 9.78 0.000 Intergenic Intergenic -77921 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr9-3096 chr9 34934678 34934888 + 9.78 0.000 Intergenic Intergenic -22704 NM_001304333 23349 Hs.7989 NM_015297 ENSG00000122733 PHF24 - PHD finger protein 24 protein-coding chr2-6130 chr2 223635102 223635312 + 9.78 0.000 Intergenic Intergenic -32846 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr16-6961 chr16 86049485 86049695 + 9.78 0.000 Intergenic Intergenic 131243 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr5-3575 chr5 75566930 75567140 + 9.78 0.000 intron (NM_016218, intron 3 of 14) intron (NM_016218, intron 3 of 14) -44441 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr12-4717 chr12 50195992 50196202 + 9.78 0.000 intron (NM_001243775, intron 1 of 4) intron (NM_001243775, intron 1 of 4) 5436 NM_001243775 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr16-6050 chr16 10709269 10709479 + 9.78 0.000 Intergenic SATR1|Satellite|Satellite -14444 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr5-2552 chr5 176823634 176823844 + 9.78 0.000 intron (NM_133369, intron 1 of 14) intron (NM_133369, intron 1 of 14) 13180 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 netrin receptor A protein-coding chr16-3806 chr16 49835973 49836183 + 9.78 0.000 intron (NM_001271620, intron 1 of 7) intron (NM_001271620, intron 1 of 7) -13340 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr10-6996 chr10 71839038 71839248 + 9.78 0.000 intron (NM_001042465, intron 1 of 14) intron (NM_001042465, intron 1 of 14) 12108 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr10-1412 chr10 103543006 103543216 + 9.78 0.000 intron (NM_004210, intron 1 of 5) intron (NM_004210, intron 1 of 5) -25669 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr9-3821 chr9 129547811 129548021 + 9.78 0.000 Intergenic MIRc|SINE|MIR 59256 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr1-7351 chr1 14628178 14628388 + 9.78 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) 29566 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr2-8957 chr2 189154240 189154450 + 9.78 0.000 intron (NM_000393, intron 1 of 53) intron (NM_000393, intron 1 of 53) -21234 NR_036076 100422908 NR_036076 ENSG00000264725 MIR3129 mir-3129 microRNA 3129 ncRNA chr4-4356 chr4 38724184 38724394 + 9.78 0.000 Intergenic Intergenic 58701 NM_030956 81793 Hs.120551 NM_030956 ENSG00000174123 TLR10 CD290 toll like receptor 10 protein-coding chr18-2276 chr18 75748265 75748475 + 9.78 0.000 Intergenic L1MDb|LINE|L1 -35967 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chr9-5634 chr9 120475596 120475806 + 9.78 0.000 intron (NR_073558, intron 15 of 37) intron (NR_073558, intron 15 of 37) 104466 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr1-5755 chr1 116330430 116330640 + 9.78 0.000 Intergenic Intergenic -42709 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr20-2675 chr20 45481603 45481813 + 9.78 0.000 TTS (NM_006103) TTS (NM_006103) 11955 NM_006103 10406 Hs.2719 NM_006103 ENSG00000101443 WFDC2 EDDM4|HE4|WAP5|dJ461P17.6 WAP four-disulfide core domain 2 protein-coding chr1-7268 chr1 232754663 232754873 + 9.78 0.000 Intergenic Intergenic -12053 NR_110683 101927683 Hs.520568 NR_110683 ENSG00000236497 LINC01744 - long intergenic non-protein coding RNA 1744 ncRNA chr21-1168 chr21 42330365 42330575 + 9.78 0.000 Intergenic Intergenic -14874 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr1-8090 chr1 4969333 4969543 + 9.78 0.000 Intergenic MIRb|SINE|MIR 314829 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr12-7533 chr12 69901076 69901286 + 9.78 0.000 intron (NM_182530, intron 10 of 24) intron (NM_182530, intron 10 of 24) 75954 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr9-4620 chr9 109448389 109448599 + 9.78 0.000 intron (NM_001145368, intron 6 of 24) intron (NM_001145368, intron 6 of 24) 2890 NM_001145370 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chr20-1302 chr20 57205728 57205938 + 9.78 0.000 intron (NM_001719, intron 2 of 6) intron (NM_001719, intron 2 of 6) -7863 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr11-3589 chr11 64572381 64572591 + 9.78 0.000 3' UTR (NM_018484, exon 10 of 10) 3' UTR (NM_018484, exon 10 of 10) 16545 NM_001307985 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr17-8307 chr17 70645583 70645793 + 9.78 0.000 Intergenic Intergenic 476153 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr19-5712 chr19 14512953 14513163 + 9.78 0.000 Intergenic Intergenic 4804 NM_001300914 3337 Hs.515210 NM_006145 ENSG00000132002 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ heat shock protein family (Hsp40) member B1 protein-coding chr21-1612 chr21 18877688 18877898 + 9.78 0.000 Intergenic L1PA3|LINE|L1 -117981 NR_109925 101927797 Hs.551743 NR_109925 MIR548XHG - MIR548X host gene ncRNA chr6-4976 chr6 106931708 106931918 + 9.78 0.000 Intergenic Intergenic 42226 NM_001291739 100133941 Hs.644105 NM_013230 ENSG00000272398 CD24 CD24A CD24 molecule protein-coding chr7-8142 chr7 28346997 28347207 + 9.78 0.000 intron (NM_182899, intron 1 of 9) intron (NM_182899, intron 1 of 9) 47781 NM_182899 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr5-3699 chr5 9374133 9374343 + 9.78 0.000 intron (NM_003966, intron 3 of 22) intron (NM_003966, intron 3 of 22) -137095 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chrX-3506 chrX 41588294 41588504 + 9.78 0.000 intron (NM_003688, intron 13 of 26) intron (NM_003688, intron 13 of 26) -100574 NM_005300 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr12-7721 chr12 91565826 91566036 + 9.78 0.000 Intergenic Intergenic -383114 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr4-2785 chr4 24256720 24256930 + 9.78 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) 216080 NR_148987 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr10-3908 chr10 69667420 69667630 + 9.78 0.000 Intergenic Intergenic 37278 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr3-1344 chr3 129068581 129068791 + 9.78 0.000 Intergenic LTR12C|LTR|ERV1 7919 NM_000174 2815 Hs.1144 NM_000174 ENSG00000169704 GP9 CD42a|GPIX glycoprotein IX platelet protein-coding chr13-1330 chr13 30313186 30313396 + 9.78 0.000 Intergenic Intergenic -5740 NM_032116 84056 Hs.243596 NM_032116 ENSG00000102781 KATNAL1 - katanin catalytic subunit A1 like 1 protein-coding chr16-3206 chr16 85209690 85209900 + 9.78 0.000 Intergenic Intergenic 1999 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr6-3673 chr6 150767736 150767946 + 9.78 0.000 intron (NM_001329803, intron 2 of 13) intron (NM_001329803, intron 2 of 13) 46742 NM_001329801 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr13-1455 chr13 75670470 75670680 + 9.78 0.000 intron (NM_001306080, intron 1 of 30) Tigger3b|DNA|TcMar-Tigger 34245 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr2-1841 chr2 201642554 201642764 + 9.78 0.000 promoter-TSS (NM_152388) promoter-TSS (NM_152388) 11 NM_152388 65062 Hs.12319 NM_152388 ENSG00000155755 TMEM237 ALS2CR4|JBTS14 transmembrane protein 237 protein-coding chr1-5193 chr1 174693148 174693358 + 9.78 0.000 intron (NM_001366446, intron 15 of 25) L2b|LINE|L2 -7286 NM_001366451 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr19-1678 chr19 3618575 3618785 + 9.78 0.000 intron (NM_001080543, intron 6 of 9) intron (NM_001080543, intron 6 of 9) 8110 NM_001080543 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr1-6495 chr1 22565903 22566113 + 9.78 0.000 intron (NM_020526, intron 1 of 16) intron (NM_020526, intron 1 of 16) 2519 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr8-6495 chr8 64653715 64653925 + 9.78 0.000 intron (NM_004820, intron 1 of 5) L1PA14|LINE|L1 -71928 NR_152770 401463 Hs.651960 NR_015374 ENSG00000254102 LOC401463 - uncharacterized LOC401463 ncRNA chr7-4601 chr7 19983087 19983297 + 9.78 0.000 intron (NR_110114, intron 3 of 5) L1MA1|LINE|L1 157234 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr17-1804 chr17 81957613 81957823 + 9.78 0.000 intron (NM_178493, intron 6 of 10) intron (NM_178493, intron 6 of 10) 3469 NM_178493 147111 Hs.106137 NM_178493 ENSG00000185269 NOTUM hNOTUM notum, palmitoleoyl-protein carboxylesterase protein-coding chr9-6838 chr9 69204496 69204706 + 9.78 0.000 promoter-TSS (NM_001170415) promoter-TSS (NM_001170415) -410 NM_001170415 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr1-13498 chr1 4368956 4369166 + 9.78 0.000 Intergenic (TGA)n|Simple_repeat|Simple_repeat -42990 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr8-3816 chr8 28562955 28563165 + 9.78 0.000 3' UTR (NM_145866, exon 7 of 7) 3' UTR (NM_145866, exon 7 of 7) -57878 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr1-7542 chr1 182149701 182149911 + 9.78 0.000 Intergenic Intergenic -88094 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr12-5633 chr12 65102153 65102363 + 9.78 0.000 intron (NM_007191, intron 2 of 9) MLT2B4|LTR|ERVL 19047 NM_007191 11197 Hs.284122 NM_007191 ENSG00000156076 WIF1 WIF-1 WNT inhibitory factor 1 protein-coding chr17-6341 chr17 74262979 74263189 + 9.78 0.000 Intergenic Intergenic -11150 NM_001172810 64446 Hs.147472 NM_023036 ENSG00000171595 DNAI2 CILD9|DIC2 dynein axonemal intermediate chain 2 protein-coding chr12-6117 chr12 128555038 128555248 + 9.78 0.000 intron (NM_001136103, intron 3 of 8) intron (NM_001136103, intron 3 of 8) 261051 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr1-9273 chr1 25371206 25371416 + 9.78 0.000 intron (NM_138617, intron 5 of 6) intron (NM_138617, intron 5 of 6) 32977 NM_014313 23585 Hs.705699 NM_014313 ENSG00000183726 TMEM50A IFNRC|SMP1 transmembrane protein 50A protein-coding chr10-5318 chr10 70975656 70975866 + 9.78 0.000 Intergenic Intergenic 36708 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr10-4933 chr10 24470344 24470554 + 9.78 0.000 intron (NM_001282770, intron 1 of 11) intron (NM_001282770, intron 1 of 11) 3918 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr15-3456 chr15 92526386 92526596 + 9.78 0.000 Intergenic Intergenic 45772 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 - long intergenic non-protein coding RNA 930 ncRNA chr4-7666 chr4 86634064 86634274 + 9.78 0.000 intron (NM_080685, intron 1 of 47) intron (NM_080685, intron 1 of 47) 39854 NM_006264 5783 Hs.436142 NM_006264 ENSG00000163629 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase non-receptor type 13 protein-coding KI270870.1-1 KI270870.1 30611 30821 + 9.78 0.000 NA NA NA NA chr13-4114 chr13 80360333 80360543 + 9.78 0.000 Intergenic Intergenic -19312 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr2-7066 chr2 166314355 166314565 + 9.78 0.000 intron (NM_001365536, intron 1 of 26) L1MB7|LINE|L1 61484 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr2-8414 chr2 118283032 118283242 + 9.78 0.000 Intergenic Intergenic -96751 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr1-8610 chr1 189560465 189560675 + 9.78 0.000 Intergenic LTR12|LTR|ERV1 915440 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chrX-5299 chrX 142632409 142632619 + 9.78 0.000 Intergenic L1PREC2|LINE|L1 -393414 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr12-3348 chr12 91256588 91256798 + 9.78 0.000 Intergenic LTR32|LTR|ERVL -73876 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr13-3227 chr13 27386569 27386779 + 9.78 0.000 Intergenic Intergenic -37945 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr12-3742 chr12 39322339 39322549 + 9.78 0.000 intron (NM_001173464, intron 27 of 37) intron (NM_001173464, intron 27 of 37) 120676 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr2-13485 chr2 147700598 147700808 + 9.78 0.000 Intergenic Intergenic -143814 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr6-2309 chr6 108750823 108751033 + 9.78 0.000 promoter-TSS (NR_033376) promoter-TSS (NR_033376) -726 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr8-6338 chr8 51370833 51371043 + 9.78 0.000 intron (NM_144651, intron 19 of 22) intron (NM_144651, intron 19 of 22) 438507 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr11-10273 chr11 103091154 103091364 + 9.78 0.000 intron (NM_001318740, intron 1 of 6) intron (NM_001318740, intron 1 of 6) 901 NM_001318741 84259 Hs.503716 NM_032299 ENSG00000137692 DCUN1D5 SCCRO5 defective in cullin neddylation 1 domain containing 5 protein-coding chr1-8206 chr1 24242272 24242482 + 9.78 0.000 Intergenic L1ME1|LINE|L1 42137 NR_027087 284632 Hs.638906 NR_027087 ENSG00000230023 LINC02800 - long intergenic non-protein coding RNA 2800 ncRNA chr10-6192 chr10 26438734 26438944 + 9.78 0.000 5' UTR (NM_019043, exon 2 of 15) 5' UTR (NM_019043, exon 2 of 15) 498 NM_019043 54518 Hs.310421 NM_019043 ENSG00000077420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta precursor protein binding family B member 1 interacting protein protein-coding chr1-16005 chr1 197961221 197961431 + 9.78 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 43954 NM_001370213 56956 Hs.442578 NM_020204 ENSG00000143355 LHX9 - LIM homeobox 9 protein-coding chr7-2780 chr7 73740612 73740822 + 9.78 0.000 Intergenic AluJb|SINE|Alu -1850 NM_001321382 83451 Hs.647045 NM_148912 ENSG00000106077 ABHD11 PP1226|WBSCR21 abhydrolase domain containing 11 protein-coding chr2-6315 chr2 68644036 68644246 + 9.78 0.000 intron (NM_138964, intron 1 of 2) intron (NM_138964, intron 1 of 2) 553 NM_138964 10887 Hs.683430 NM_138964 ENSG00000169618 PROKR1 GPR73|GPR73a|PK-R1|PKR1|ZAQ prokineticin receptor 1 protein-coding chr20-1342 chr20 9093655 9093865 + 9.78 0.000 intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) 24706 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr18-2277 chr18 75912069 75912279 + 9.78 0.000 Intergenic Intergenic -199771 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chr15-1446 chr15 77741340 77741550 + 9.78 0.000 intron (NM_001301186, intron 2 of 5) intron (NM_001301186, intron 2 of 5) -20694 NM_001301197 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr9-6909 chr9 91838810 91839020 + 9.78 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 111313 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr7-9295 chr7 127210149 127210359 + 9.78 0.000 intron (NR_163850, intron 1 of 9) intron (NR_163850, intron 1 of 9) -4873 NR_110195 101928333 Hs.551332 NR_110194 ENSG00000236340 LOC101928333 - uncharacterized LOC101928333 ncRNA chr22-2338 chr22 41631084 41631294 + 9.78 0.000 intron (NM_001288977, intron 3 of 12) SVA_D|Retroposon|SVA 9894 NM_001469 2547 Hs.292493 NM_001469 ENSG00000196419 XRCC6 CTC75|CTCBF|G22P1|KU70|ML8|TLAA X-ray repair cross complementing 6 protein-coding chr5-6574 chr5 22041608 22041818 + 9.78 0.000 intron (NM_004061, intron 5 of 14) L1MA6|LINE|L1 -100639 NR_003921 5369 Hs.247975 NM_031887 ENSG00000168967 PMCHL1 - pro-melanin concentrating hormone like 1 (pseudogene) pseudo chr7-4166 chr7 102616595 102616805 + 9.78 0.000 promoter-TSS (NM_006989) promoter-TSS (NM_006989) 56 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr21-646 chr21 25375691 25375901 + 9.78 0.000 Intergenic L1M3f|LINE|L1 55905 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA chr17-2385 chr17 77700678 77700888 + 9.78 0.000 Intergenic Intergenic 27776 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr11-6308 chr11 61703727 61703937 + 9.78 0.000 intron (NM_006133, intron 1 of 19) MER39|LTR|ERV1 23441 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr4-1834 chr4 108505510 108505720 + 9.78 0.000 Intergenic L1PA7|LINE|L1 -51618 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chr1-7355 chr1 16466956 16467166 + 9.78 0.000 TTS (NR_023386) TTS (NR_023386) 5254 NR_147211 107984921 Hs.528312 NR_147210 ENSG00000226029 LINC01772 - long intergenic non-protein coding RNA 1772 ncRNA chr17-3671 chr17 9244561 9244771 + 9.78 0.000 TTS (NM_004822) TTS (NM_004822) -65548 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr19-2453 chr19 58511233 58511443 + 9.78 0.000 exon (NM_012254, exon 1 of 10) exon (NM_012254, exon 1 of 10) 654 NM_012254 10998 Hs.292177 NM_012254 ENSG00000083807 SLC27A5 ACSB|ACSVL6|BACS|BAL|FACVL3|FATP-5|FATP5|VLACSR|VLCS-H2|VLCSH2 solute carrier family 27 member 5 protein-coding chr8-3983 chr8 52836479 52836689 + 9.78 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -103324 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr11-6895 chr11 104830152 104830362 + 9.78 0.000 Intergenic MER65C|LTR|ERV1 68413 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr8-5572 chr8 82568803 82569013 + 9.78 0.000 Intergenic L1MEc|LINE|L1 -343196 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr10-3842 chr10 5466507 5466717 + 9.78 0.000 Intergenic Intergenic 20003 NM_005863 10276 Hs.25155 NM_005863 ENSG00000173848 NET1 ARHGEF8|NET1A neuroepithelial cell transforming 1 protein-coding chr3-6940 chr3 160003533 160003743 + 9.78 0.000 intron (NR_108088, intron 6 of 9) intron (NR_108088, intron 6 of 9) 14803 NM_001354583 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr21-830 chr21 43832572 43832782 + 9.78 0.000 Intergenic L2|LINE|L2 -20110 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chr11-6242 chr11 48729769 48729979 + 9.78 0.000 Intergenic L1P1|LINE|L1 241081 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding chr22-1498 chr22 37493945 37494155 + 9.78 0.000 intron (NM_014550, intron 16 of 19) intron (NM_014550, intron 16 of 19) -7663 NM_001166343 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr16-2468 chr16 86966426 86966636 + 9.78 0.000 Intergenic Intergenic -91253 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr7-9565 chr7 142029512 142029722 + 9.78 0.000 intron (NM_004668, intron 10 of 47) intron (NM_004668, intron 10 of 47) 33738 NM_004668 8972 Hs.122785 NM_004668 ENSG00000257335 MGAM MG|MGA maltase-glucoamylase protein-coding chr17-1814 chr17 82738051 82738261 + 9.78 0.000 intron (NM_022158, intron 1 of 5) intron (NM_022158, intron 1 of 5) 2541 NM_022158 64122 Hs.151135 NM_022158 ENSG00000167363 FN3K - fructosamine 3 kinase protein-coding chr2-6715 chr2 27071012 27071222 + 9.78 0.000 TTS (NM_021831) TTS (NM_021831) 537 NM_001134693 100128731 Hs.502948 NM_001134693 ENSG00000228474 OST4 - oligosaccharyltransferase complex subunit 4, non-catalytic protein-coding chr3-3718 chr3 179921539 179921749 + 9.78 0.000 non-coding (NR_110059, exon 3 of 3) non-coding (NR_110059, exon 3 of 3) 22107 NR_110061 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr2-9792 chr2 119178826 119179036 + 9.78 0.000 Intergenic Intergenic -20180 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr8-3153 chr8 80934157 80934367 + 9.78 0.000 Intergenic Intergenic -59481 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr2-4237 chr2 219433031 219433241 + 9.78 0.000 Intergenic Intergenic -1707 NM_005876 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr9-6333 chr9 4236135 4236345 + 9.78 0.000 intron (NM_001042413, intron 2 of 10) intron (NM_001042413, intron 2 of 10) 63828 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr17-4358 chr17 9529382 9529592 + 9.78 0.000 intron (NR_033656, intron 2 of 5) L1ME3A|LINE|L1 46333 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chrX-2076 chrX 20556872 20557082 + 9.78 0.000 Intergenic HAL1ME|LINE|L1 -290068 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr2-8171 chr2 86062153 86062363 + 9.78 0.000 intron (NM_015425, intron 14 of 33) intron (NM_015425, intron 14 of 33) 43628 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr19-3921 chr19 46753479 46753689 + 9.78 0.000 intron (NM_001039885, intron 3 of 3) L2|LINE|L2 -7134 NM_001039877 29888 Hs.631590 NM_013403 ENSG00000090372 STRN4 PPP2R6C|ZIN|zinedin striatin 4 protein-coding chr17-7507 chr17 17151105 17151315 + 9.78 0.000 intron (NM_201274, intron 12 of 23) MER77B|LTR|ERVL 55123 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr9-2980 chr9 34576167 34576377 + 9.78 0.000 intron (NM_001842, intron 1 of 8) (CA)n|Simple_repeat|Simple_repeat 8260 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr4-1822 chr4 83852204 83852414 + 9.78 0.000 Intergenic Intergenic 316201 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr14-4838 chr14 69405162 69405372 + 9.78 0.000 intron (NM_001330185, intron 1 of 5) intron (NM_001330185, intron 1 of 5) 6575 NM_001330185 55334 Hs.432690 NM_018375 ENSG00000029364 SLC39A9 ZIP-9|ZIP9 solute carrier family 39 member 9 protein-coding chr3-4472 chr3 49462073 49462283 + 9.78 0.000 Intergenic L2c|LINE|L2 -6525 NM_001177643 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr6-2745 chr6 100266562 100266772 + 9.78 0.000 Intergenic Intergenic 197008 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr12-4311 chr12 126130630 126130840 + 9.78 0.000 Intergenic L1PA15|LINE|L1 34743 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000284848 LINC02359 - long intergenic non-protein coding RNA 2359 ncRNA chr5-3450 chr5 159879214 159879424 + 9.78 0.000 Intergenic Intergenic -7935 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr3-4726 chr3 63443215 63443425 + 9.78 0.000 promoter-TSS (NM_144642) promoter-TSS (NM_144642) 8 NM_144642 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr19-1557 chr19 603180 603390 + 9.78 0.000 intron (NM_001194, intron 1 of 7) intron (NM_001194, intron 1 of 7) 13404 NM_001194 610 Hs.124161 NM_001194 ENSG00000099822 HCN2 BCNG-2|BCNG2|HAC-1 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 protein-coding chr14-2149 chr14 88471077 88471287 + 9.78 0.000 intron (NM_007039, intron 15 of 18) intron (NM_007039, intron 15 of 18) 83825 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr15-3567 chr15 41228984 41229194 + 9.78 0.000 intron (NM_001286441, intron 1 of 11) intron (NM_001286441, intron 1 of 11) 1668 NM_001286441 161829 Hs.307999 NM_152596 ENSG00000178997 EXD1 EXDL1 exonuclease 3'-5' domain containing 1 protein-coding chrX-2709 chrX 121166206 121166416 + 9.78 0.000 Intergenic Intergenic 118701 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chr17-5671 chr17 50423961 50424171 + 9.78 0.000 Intergenic Intergenic -2092 NM_025149 80221 Hs.288959 NM_025149 ENSG00000167107 ACSF2 ACSMW|AVYV493 acyl-CoA synthetase family member 2 protein-coding chr8-3996 chr8 54166148 54166358 + 9.78 0.000 Intergenic Intergenic 31012 NM_014175 29088 Hs.18349 NM_014175 ENSG00000137547 MRPL15 HSPC145|L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding chr14-1597 chr14 95515246 95515456 + 9.78 0.000 Intergenic Intergenic 18278 NR_003002 677768 Hs.448753 NR_003002 ENSG00000252481 SCARNA13 U93 small Cajal body-specific RNA 13 ncRNA chr7-3669 chr7 45685236 45685446 + 9.78 0.000 intron (NM_021116, intron 12 of 19) (AGGAC)n|Simple_repeat|Simple_repeat 83677 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr13-1489 chr13 110812611 110812821 + 9.78 0.000 promoter-TSS (NR_158538) promoter-TSS (NR_158538) 368 NR_135280 283486 Hs.447504 NR_135280 ENSG00000259831 LINC00567 - long intergenic non-protein coding RNA 567 ncRNA chr6-2314 chr6 111361760 111361970 + 9.78 0.000 intron (NM_001286431, intron 19 of 34) intron (NM_001286431, intron 19 of 34) 102526 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr11-3351 chr11 120642768 120642978 + 9.78 0.000 intron (NM_001282470, intron 1 of 19) intron (NM_001282470, intron 1 of 19) 78437 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr8-5732 chr8 135514284 135514494 + 9.78 0.000 intron (NM_006558, intron 1 of 8) L1MB2|LINE|L1 56933 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr21-454 chr21 45915559 45915769 + 9.78 0.000 intron (NM_001348241, intron 11 of 16) intron (NM_001348241, intron 11 of 16) -57306 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr3-5504 chr3 195188062 195188272 + 9.78 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 40296 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr6-5167 chr6 127344382 127344592 + 9.78 0.000 promoter-TSS (NM_001105544) promoter-TSS (NM_001105544) -878 NM_001105545 55862 Hs.486410 NM_018479 ENSG00000093144 ECHDC1 HEL-S-76|MMCD|dJ351K20.2 ethylmalonyl-CoA decarboxylase 1 protein-coding chrX-1453 chrX 85850696 85850906 + 9.78 0.000 Intergenic L1M2|LINE|L1 15021 NR_031710 100302171 NR_031710 ENSG00000283435 MIR1321 MIRN1321|hsa-mir-1321 microRNA 1321 ncRNA chr10-3080 chr10 7948423 7948633 + 9.78 0.000 intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 103963 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 - GATA3 antisense RNA 1 ncRNA chr3-8898 chr3 12207535 12207745 + 9.78 0.000 Intergenic L1M4|LINE|L1 -48728 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr3-9188 chr3 35695886 35696096 + 9.78 0.000 intron (NM_016300, intron 9 of 19) MIR|SINE|MIR 15051 NM_198399 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr3-6229 chr3 65604871 65605081 + 9.78 0.000 intron (NM_001365904, intron 2 of 24) intron (NM_001365904, intron 2 of 24) -288840 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr16-1732 chr16 67666512 67666722 + 9.78 0.000 promoter-TSS (NM_001012984) promoter-TSS (NM_001012984) 133 NR_138150 84080 Hs.729159 NM_032140 ENSG00000124074 ENKD1 C16orf48|DAKV6410 enkurin domain containing 1 protein-coding chr2-12740 chr2 84190270 84190480 + 9.78 0.000 Intergenic Intergenic -100307 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr4-2390 chr4 51970130 51970340 + 9.78 0.000 Intergenic L1PA10|LINE|L1 50128 NM_001024611 339977 Hs.661450 NM_001024611 ENSG00000188993 LRRC66 - leucine rich repeat containing 66 protein-coding chr2-11892 chr2 23695992 23696202 + 9.78 0.000 exon (NM_052920, exon 10 of 14) exon (NM_052920, exon 10 of 14) 231026 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr18-2338 chr18 14016404 14016614 + 9.78 0.000 Intergenic Intergenic -100802 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding chr17-7827 chr17 40832829 40833039 + 9.78 0.000 intron (NR_160886, intron 1 of 2) intron (NR_160886, intron 1 of 2) -10320 NM_000421 3858 Hs.99936 NM_000421 ENSG00000186395 KRT10 BCIE|BIE|CK10|EHK|K10|KPP keratin 10 protein-coding chr21-1613 chr21 18917416 18917626 + 9.78 0.000 Intergenic Intergenic -157709 NR_109925 101927797 Hs.551743 NR_109925 MIR548XHG - MIR548X host gene ncRNA chr10-8693 chr10 101664397 101664607 + 9.78 0.000 intron (NR_136613, intron 4 of 7) intron (NR_136613, intron 4 of 7) 30668 NM_022039 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr15-1123 chr15 33360940 33361150 + 9.78 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 50078 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr7-2865 chr7 113289232 113289442 + 9.78 0.000 Intergenic LTR40c|LTR|ERVL -170755 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding chr13-1861 chr13 19927541 19927751 + 9.78 0.000 Intergenic L1M5|LINE|L1 -29760 NM_001353159 7750 Hs.507433 NM_003453 ENSG00000121741 ZMYM2 FIM|MYM|RAMP|SCLL|ZNF198 zinc finger MYM-type containing 2 protein-coding chr4-6527 chr4 169241845 169242055 + 9.78 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 29006 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr17-7218 chr17 807237 807447 + 9.78 0.000 intron (NM_001205319, intron 5 of 7) CpG 24989 NM_001317947 55178 Hs.182729 NM_018146 ENSG00000171861 MRM3 RMTL1|RNMTL1 mitochondrial rRNA methyltransferase 3 protein-coding chr11-10233 chr11 99693854 99694064 + 9.78 0.000 intron (NM_175566, intron 1 of 21) L2c|LINE|L2 137814 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr10-8921 chr10 115644551 115644761 + 9.78 0.000 intron (NM_207303, intron 26 of 28) MIR|SINE|MIR 550133 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr13-1353 chr13 64248420 64248630 + 9.78 0.000 Intergenic Intergenic -172514 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr18-3453 chr18 67931077 67931287 + 9.78 0.000 Intergenic Intergenic -116360 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr3-7747 chr3 59884458 59884668 + 9.78 0.000 intron (NM_001354590, intron 7 of 8) intron (NM_001354590, intron 7 of 8) 196346 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding KI270735.1-1 KI270735.1 42260 42470 + 9.78 0.000 NA NA NA NA chr2-1607 chr2 171999756 171999966 + 9.78 0.000 promoter-TSS (NR_136276) promoter-TSS (NR_136276) -92 NM_199227 254042 Hs.298250 NM_199227 ENSG00000172878 METAP1D MAP 1D|MAP1D|MetAP 1D|Metap1l methionyl aminopeptidase type 1D, mitochondrial protein-coding chr20-3824 chr20 24032944 24033154 + 9.78 0.000 Intergenic L4_A_Mam|LINE|RTE-X -44270 NM_178311 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr1-6622 chr1 42862688 42862898 + 9.78 0.000 intron (NR_104171, intron 1 of 3) L1MCa|LINE|L1 5171 NR_104171 339539 Hs.434301 NR_104171 LOC339539 - uncharacterized LOC339539 ncRNA chr4-8762 chr4 187175247 187175457 + 9.78 0.000 Intergenic Intergenic -26634 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr6-3573 chr6 65730801 65731011 + 9.78 0.000 Intergenic Intergenic -23680 NM_001142800 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding chr14-5035 chr14 79486300 79486510 + 9.78 0.000 intron (NR_073547, intron 15 of 20) Charlie7a|DNA|hAT-Charlie 207025 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr2-13819 chr2 175371886 175372096 + 9.78 0.000 Intergenic Intergenic -190281 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr6-5781 chr6 1479934 1480144 + 9.78 0.000 Intergenic Intergenic -89628 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr1-10535 chr1 170678548 170678758 + 9.78 0.000 intron (NM_022716, intron 1 of 3) intron (NM_022716, intron 1 of 3) 14522 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr1-7682 chr1 20240247 20240457 + 9.78 0.000 Intergenic MER4D1|LTR|ERV1 -2743 NR_147205 105376827 Hs.559701 NR_147205 ENSG00000228105 LINC01757 - long intergenic non-protein coding RNA 1757 ncRNA chr21-863 chr21 36337077 36337287 + 9.78 0.000 intron (NM_015358, intron 3 of 16) intron (NM_015358, intron 3 of 16) 16985 NM_015358 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr10-8084 chr10 67950673 67950883 + 9.78 0.000 intron (NM_022079, intron 20 of 25) L1MC5|LINE|L1 59376 NM_001314049 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr17-2708 chr17 62618098 62618308 + 9.78 0.000 Intergenic Intergenic -9467 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr12-4810 chr12 56088275 56088485 + 9.78 0.000 intron (NM_001982, intron 7 of 27) intron (NM_001982, intron 7 of 27) 8272 NM_001005915 2065 Hs.118681 NM_001982 ENSG00000065361 ERBB3 ErbB-3|FERLK|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 erb-b2 receptor tyrosine kinase 3 protein-coding chr21-277 chr21 43659536 43659746 + 9.78 0.000 promoter-TSS (NM_015056) promoter-TSS (NM_015056) 81 NM_015056 23076 Hs.565725 NM_015056 ENSG00000160208 RRP1B KIAA0179|NNP1L|Nnp1|PPP1R136|RRP1 ribosomal RNA processing 1B protein-coding chr10-2658 chr10 93861809 93862019 + 9.78 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -32064 NR_144337 159371 Hs.632085 NM_153226 ENSG00000176273 SLC35G1 C10orf60|POST|TMEM20 solute carrier family 35 member G1 protein-coding chr9-7924 chr9 89486044 89486254 + 9.78 0.000 intron (NM_001371194, intron 1 of 15) intron (NM_001371194, intron 1 of 15) -6259 NM_001371201 chr9-7404 chr9 20490188 20490398 + 9.78 0.000 intron (NM_001286691, intron 2 of 10) MLT1E2|LTR|ERVL-MaLR 12049 NR_039685 100616441 NR_039685 ENSG00000264941 MIR4474 - microRNA 4474 ncRNA chr19-5667 chr19 7799959 7800169 + 9.78 0.000 Intergenic HERVKC4-int|LTR|ERVK 12580 NR_002931 440508 Hs.568222 NR_002931 CLEC4GP1 - C-type lectin domain family 4 member G pseudogene 1 pseudo chr10-5186 chr10 59654320 59654530 + 9.78 0.000 exon (NM_001323978, exon 6 of 7) exon (NM_001323978, exon 6 of 7) 55466 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chrX-1425 chrX 41276545 41276755 + 9.78 0.000 non-coding (NR_135616, exon 2 of 2) non-coding (NR_135616, exon 2 of 2) 911 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr13-1227 chr13 79581839 79582049 + 9.78 0.000 Intergenic L1PA8A|LINE|L1 15217 NR_125772 103724388 Hs.434862 NR_125772 ENSG00000227676 LINC01068 - long intergenic non-protein coding RNA 1068 ncRNA chr16-6422 chr16 56278729 56278939 + 9.78 0.000 intron (NM_138736, intron 3 of 7) L2a|LINE|L2 33314 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr19-2919 chr19 1934985 1935195 + 9.78 0.000 Intergenic Intergenic -6082 NM_001319 1455 Hs.651905 NM_001319 ENSG00000133275 CSNK1G2 CK1g2 casein kinase 1 gamma 2 protein-coding chr20-1216 chr20 17753330 17753540 + 9.78 0.000 Intergenic Intergenic 53487 NM_178477 140836 Hs.115366 NM_178477 ENSG00000125888 BANF2 BAF-L|BAF2|BAFL|C20orf179 barrier to autointegration factor 2 protein-coding chr21-723 chr21 36192050 36192260 + 9.78 0.000 intron (NM_005128, intron 2 of 36) AluJb|SINE|Alu 27614 NM_005128 9980 Hs.204575 NM_005128 ENSG00000142197 DOP1B 21orf5|C21orf5|DOPEY2 DOP1 leucine zipper like protein B protein-coding chr10-1733 chr10 115082871 115083081 + 9.78 0.000 Intergenic Intergenic -10389 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr18-1532 chr18 11078637 11078847 + 9.78 0.000 intron (NM_022068, intron 1 of 51) intron (NM_022068, intron 1 of 51) 70020 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr1-6241 chr1 226076461 226076671 + 9.78 0.000 Intergenic AluJr|SINE|Alu -7009 NR_146920 105373113 Hs.149726 NR_146920 LINC01703 lncPARP1 long intergenic non-protein coding RNA 1703 ncRNA chr3-2518 chr3 12288820 12289030 + 9.78 0.000 promoter-TSS (NM_138711) promoter-TSS (NM_138711) -12 NM_138711 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr7-5280 chr7 22859968 22860178 + 9.78 0.000 intron (NR_146320, intron 3 of 4) intron (NR_146320, intron 3 of 4) 3460 NR_003075 692210 NR_003075 ENSG00000221740 SNORD93 HBII-336 small nucleolar RNA, C/D box 93 snoRNA chr2-14284 chr2 216109990 216110200 + 9.78 0.000 intron (NM_021141, intron 1 of 20) MIR|SINE|MIR 747 NM_021141 7520 Hs.388739 NM_021141 ENSG00000079246 XRCC5 KARP-1|KARP1|KU80|KUB2|Ku86|NFIV X-ray repair cross complementing 5 protein-coding chrX-1139 chrX 35053046 35053256 + 9.78 0.000 Intergenic Intergenic 110355 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr20-3518 chr20 63934460 63934670 + 9.78 0.000 3' UTR (NM_025219, exon 5 of 5) 3' UTR (NM_025219, exon 5 of 5) 6979 NR_031735 100302137 NR_031735 ENSG00000284433 MIR1914 MIRN1914|hsa-mir-1914 microRNA 1914 ncRNA chr22-2688 chr22 37215330 37215540 + 9.78 0.000 Intergenic AluSx|SINE|Alu -2958 NM_001051 6753 Hs.225995 NM_001051 ENSG00000278195 SSTR3 SS-3-R|SS3-R|SS3R|SSR-28 somatostatin receptor 3 protein-coding chr14-2221 chr14 103513008 103513218 + 9.78 0.000 Intergenic Intergenic 9717 NM_001823 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr20-3260 chr20 2688580 2688790 + 9.78 0.000 Intergenic Intergenic -4095 NR_138537 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr3-5157 chr3 58835160 58835370 + 9.78 0.000 intron (NM_198463, intron 12 of 15) L2c|LINE|L2 10794 NR_110820 101929238 Hs.683953 NR_110820 ENSG00000242428 C3orf67-AS1 - C3orf67 antisense RNA 1 ncRNA chr13-4298 chr13 99484513 99484723 + 9.78 0.000 Intergenic MER90|LTR|ERV1 14688 NR_110731 102725509 Hs.648968 NR_110731 LINC01232 TCONS_00021520 long intergenic non-protein coding RNA 1232 ncRNA chr15-3771 chr15 64981696 64981906 + 9.78 0.000 intron (NM_001127889, intron 2 of 8) intron (NM_001127889, intron 2 of 8) 7669 NM_001127889 51324 Hs.242458 NM_016630 ENSG00000090487 SPG21 ABHD21|ACP33|BM-019|GL010|MAST SPG21 abhydrolase domain containing, maspardin protein-coding chr6-5335 chr6 145543985 145544195 + 9.78 0.000 Intergenic Intergenic 142787 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr9-5728 chr9 126123799 126124009 + 9.78 0.000 Intergenic L2a|LINE|L2 152011 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr11-4188 chr11 61091703 61091913 + 9.78 0.000 Intergenic Intergenic -2155 NM_001346456 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr3-5517 chr3 196439954 196440164 + 9.78 0.000 Intergenic Intergenic -7632 NM_015562 26043 Hs.518524 NM_015562 ENSG00000163960 UBXN7 UBXD7 UBX domain protein 7 protein-coding chr1-4769 chr1 10892154 10892364 + 9.78 0.000 Intergenic L2a|LINE|L2 74428 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr22-3365 chr22 29004801 29005011 + 9.78 0.000 intron (NM_001206998, intron 2 of 8) intron (NM_001206998, intron 2 of 8) 26570 NR_046851 100874123 Hs.674708 NR_046851 ENSG00000177993 ZNRF3-AS1 - ZNRF3 antisense RNA 1 ncRNA chr13-3383 chr13 85194544 85194754 + 9.78 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -46592 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr10-3017 chr10 102395444 102395654 + 9.78 0.000 promoter-TSS (NM_002502) promoter-TSS (NM_002502) -156 NM_001261403 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr3-3515 chr3 27354935 27355145 + 9.78 0.000 intron (NM_152534, intron 2 of 38) intron (NM_152534, intron 2 of 38) 14343 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chrX-415 chrX 155026885 155027095 + 9.78 0.000 exon (NM_023934, exon 1 of 5) exon (NM_023934, exon 1 of 5) 146 NM_023934 65991 Hs.356050 NM_023934 ENSG00000165775 FUNDC2 DC44|HCBP6|HCC3|PD03104 FUN14 domain containing 2 protein-coding chr2-6986 chr2 135500942 135501152 + 9.78 0.000 intron (NM_001286569, intron 2 of 21) L1MEd|LINE|L1 29538 NM_001286568 84083 Hs.658422 NM_032143 ENSG00000121988 ZRANB3 4933425L19Rik|AH2 zinc finger RANBP2-type containing 3 protein-coding chr8-1753 chr8 29263177 29263387 + 9.78 0.000 promoter-TSS (NM_015254) promoter-TSS (NM_015254) -212 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr1-3341 chr1 33036076 33036286 + 9.78 0.000 intron (NM_001319139, intron 1 of 7) intron (NM_001319139, intron 1 of 7) 702 NM_001199199 204 Hs.470907 NM_001625 ENSG00000004455 AK2 ADK2 adenylate kinase 2 protein-coding chr5-6166 chr5 52007338 52007548 + 9.78 0.000 promoter-TSS (NR_147166) promoter-TSS (NR_147166) -588 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr18-1284 chr18 60517117 60517327 + 9.78 0.000 Intergenic L1M4a1|LINE|L1 -144447 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr18-2737 chr18 75344644 75344854 + 9.78 0.000 Intergenic Intergenic 82954 NM_001303482 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr1-11730 chr1 12135721 12135931 + 9.78 0.000 intron (NM_001281430, intron 12 of 13) intron (NM_001281430, intron 12 of 13) -31117 NR_107000 102465836 NR_107000 ENSG00000283789 MIR7846 hsa-mir-7846 microRNA 7846 ncRNA chr10-5039 chr10 35332158 35332368 + 9.78 0.000 intron (NM_181698, intron 3 of 11) intron (NM_181698, intron 3 of 11) -4246 NM_145012 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr12-7386 chr12 57174855 57175065 + 9.78 0.000 intron (NM_002332, intron 22 of 88) intron (NM_002332, intron 22 of 88) -19544 NR_031597 100302201 NR_031597 ENSG00000221365 MIR1228 MIRN1228|hsa-mir-1228|mir-1228 microRNA 1228 ncRNA chr15-2538 chr15 43301488 43301698 + 9.78 0.000 intron (NM_052955, intron 1 of 12) AluSx1|SINE|Alu 662 NM_052955 116179 Hs.164661 NM_052955 ENSG00000159495 TGM7 TGMZ transglutaminase 7 protein-coding chr3-1461 chr3 51990562 51990772 + 9.78 0.000 Intergenic LTR12C|LTR|ERV1 5228 NM_000992 6159 Hs.425125 NM_000992 ENSG00000162244 RPL29 HIP|HUMRPL29|L29|RPL29P10|RPL29_3_370 ribosomal protein L29 protein-coding chr6-3940 chr6 85436518 85436728 + 9.78 0.000 Intergenic L1MC1|LINE|L1 -12961 NM_001204813 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr17-6812 chr17 8837585 8837795 + 9.78 0.000 intron (NR_110865, intron 5 of 19) intron (NR_110865, intron 5 of 19) 29987 NM_001010855 146850 Hs.255809 NM_001010855 ENSG00000276231 PIK3R6 C17orf38|HsT41028|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase regulatory subunit 6 protein-coding chr10-8785 chr10 105995418 105995628 + 9.78 0.000 Intergenic Intergenic -144642 NR_134331 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr21-737 chr21 38043356 38043566 + 9.78 0.000 Intergenic Intergenic 77899 NR_147130 10281 Hs.23251 NM_005867 ENSG00000184029 DSCR4 DCRB|DSCRB Down syndrome critical region 4 ncRNA chr18-771 chr18 22342685 22342895 + 9.78 0.000 Intergenic Intergenic 75125 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T cell lymphoma-associated antigen 1 protein-coding chr20-3135 chr20 36020516 36020726 + 9.78 0.000 intron (NR_130714, intron 8 of 8) intron (NR_130714, intron 8 of 8) 30339 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr13-1129 chr13 27018282 27018492 + 9.78 0.000 Intergenic Intergenic -107146 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr4-5581 chr4 168213582 168213792 + 9.78 0.000 Intergenic L1PA7|LINE|L1 105065 NM_017631 55601 Hs.591710 NM_017631 ENSG00000137628 DDX60 - DExD/H-box helicase 60 protein-coding chr2-14417 chr2 221773551 221773761 + 9.78 0.000 Intergenic Intergenic -199454 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr4-1829 chr4 94516422 94516632 + 9.78 0.000 intron (NM_001256428, intron 2 of 11) (TC)n|Simple_repeat|Simple_repeat 64585 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr6-5089 chr6 118649385 118649595 + 9.78 0.000 intron (NM_001178035, intron 2 of 13) intron (NM_001178035, intron 2 of 13) 2101 NM_206921 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr6-8148 chr6 129990171 129990381 + 9.78 0.000 Intergenic L1M5|LINE|L1 -28093 NM_032438 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr7-2613 chr7 515590 515800 + 9.78 0.000 intron (NM_002607, intron 2 of 6) intron (NM_002607, intron 2 of 6) 4149 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr2-8381 chr2 111985016 111985226 + 9.78 0.000 intron (NM_006343, intron 8 of 18) intron (NM_006343, intron 8 of 18) -70148 NM_001329914 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr17-1898 chr17 64333762 64333972 + 9.78 0.000 intron (NM_000442, intron 14 of 15) AluSz|SINE|Alu 56993 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr13-3119 chr13 74243614 74243824 + 9.78 0.000 intron (NR_144451, intron 1 of 1) L1PA8|LINE|L1 12275 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr10-8050 chr10 64524613 64524823 + 9.78 0.000 Intergenic Intergenic -300810 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr4-2245 chr4 156496619 156496829 + 9.78 0.000 Intergenic Intergenic 475075 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr5-4120 chr5 79448413 79448623 + 9.78 0.000 intron (NM_001277078, intron 3 of 5) intron (NM_001277078, intron 3 of 5) 65318 NM_001277077 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr1-16652 chr1 240967110 240967320 + 9.78 0.000 intron (NM_001350116, intron 4 of 16) LTR104_Mam|LTR|Gypsy -165057 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr14-3377 chr14 92783831 92784041 + 9.78 0.000 Intergenic Intergenic -10369 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr13-1998 chr13 30885065 30885275 + 9.78 0.000 intron (NR_038287, intron 2 of 3) L1MB3|LINE|L1 2608 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr1-15880 chr1 182985615 182985825 + 9.78 0.000 Intergenic L1MEg|LINE|L1 -32554 NM_030933 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr15-1258 chr15 80174372 80174582 + 9.78 0.000 intron (NM_000137, intron 9 of 13) MER113|DNA|hAT-Charlie 21478 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr2-5473 chr2 129376235 129376445 + 9.78 0.000 Intergenic Intergenic -102449 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr6-1984 chr6 3390766 3390976 + 9.78 0.000 intron (NM_021945, intron 4 of 10) intron (NM_021945, intron 4 of 10) 54142 NM_021945 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr12-3400 chr12 105077613 105077823 + 9.78 0.000 intron (NR_027752, intron 1 of 22) intron (NR_027752, intron 1 of 22) 6740 NR_027752 160428 Hs.42572 NM_001034173 ENSG00000136010 ALDH1L2 mtFDH aldehyde dehydrogenase 1 family member L2 protein-coding chr2-3421 chr2 63425807 63426017 + 9.78 0.000 intron (NR_148704, intron 10 of 18) L1PA16|LINE|L1 12095 NR_122106 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr22-1448 chr22 46444639 46444849 + 9.78 0.000 intron (NM_014246, intron 2 of 34) MLT1C|LTR|ERVL-MaLR 92876 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr4-5686 chr4 23888472 23888682 + 9.78 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) 1470 NR_148984 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr2-1460 chr2 29921616 29921826 + 9.78 0.000 promoter-TSS (NM_004304) promoter-TSS (NM_004304) -135 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr7-5613 chr7 52067867 52068077 + 9.78 0.000 Intergenic L1M5|LINE|L1 -674716 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr8-7250 chr8 128197747 128197957 + 9.78 0.000 Intergenic Intergenic 47736 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr9-1298 chr9 97353838 97354048 + 9.78 0.000 intron (NM_020893, intron 22 of 36) intron (NM_020893, intron 22 of 36) 9738 NR_031637 100302223 NR_031637 ENSG00000221269 MIR1302-8 MIRN1302-8|hsa-mir-1302-8 microRNA 1302-8 ncRNA chr18-808 chr18 80197529 80197739 + 9.78 0.000 intron (NM_032510, intron 2 of 2) intron (NM_032510, intron 2 of 2) 49710 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr12-3444 chr12 112710153 112710363 + 9.78 0.000 intron (NM_001347952, intron 1 of 21) AluYm1|SINE|Alu -15082 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr18-1576 chr18 35371820 35372030 + 9.78 0.000 intron (NM_145756, intron 3 of 4) intron (NM_145756, intron 3 of 4) 5412 NM_001322290 252884 Hs.351005 NM_145756 ENSG00000186496 ZNF396 ZSCAN14 zinc finger protein 396 protein-coding chr5-7955 chr5 80715246 80715456 + 9.78 0.000 intron (NM_002439, intron 8 of 23) L2a|LINE|L2 -60368 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr4-2311 chr4 84957318 84957528 + 9.78 0.000 intron (NM_014991, intron 1 of 67) intron (NM_014991, intron 1 of 67) -8193 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr4-1929 chr4 85496412 85496622 + 9.78 0.000 intron (NM_001025616, intron 1 of 9) intron (NM_001025616, intron 1 of 9) 21367 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr14-1617 chr14 102314186 102314396 + 9.78 0.000 Intergenic CpG -3086 NM_001267827 55778 Hs.743359 NM_018335 ENSG00000022976 ZNF839 C14orf131 zinc finger protein 839 protein-coding chr12-5102 chr12 96136962 96137172 + 9.78 0.000 Intergenic Intergenic -57308 NM_005230 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr2-5216 chr2 45945962 45946172 + 9.78 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 294392 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr19-2983 chr19 31904484 31904694 + 9.78 0.000 Intergenic Intergenic -121273 NR_110674 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA chr7-4462 chr7 134016646 134016856 + 9.78 0.000 intron (NM_021807, intron 17 of 17) intron (NM_021807, intron 17 of 17) -110589 NM_001365700 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr6-2549 chr6 36025878 36026088 + 9.78 0.000 Intergenic Intergenic -1342 NM_001193476 116369 Hs.435836 NM_052961 ENSG00000112053 SLC26A8 SPGF3|TAT1 solute carrier family 26 member 8 protein-coding chr10-3519 chr10 71557355 71557565 + 9.78 0.000 intron (NM_052836, intron 6 of 12) HAL1|LINE|L1 -45540 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr11-2680 chr11 73663888 73664098 + 9.78 0.000 Intergenic L2b|LINE|L2 15080 NM_001130036 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr12-1431 chr12 67053072 67053282 + 9.78 0.000 Intergenic L2a|LINE|L2 43107 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr12-1675 chr12 91316584 91316794 + 9.78 0.000 Intergenic Intergenic -133872 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr7-5518 chr7 44408554 44408764 + 9.78 0.000 intron (NM_015332, intron 3 of 5) L1ME3Cz|LINE|L1 81999 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr8-3491 chr8 102461274 102461484 + 9.78 0.000 Intergenic MLT1J2-int|LTR|ERVL-MaLR -48679 NM_015902 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr13-2038 chr13 46640793 46641003 + 9.78 0.000 intron (NM_001164213, intron 1 of 18) intron (NM_001164213, intron 1 of 18) 87728 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr20-1794 chr20 62159209 62159419 + 9.78 0.000 intron (NR_125980, intron 3 of 12) intron (NR_125980, intron 3 of 12) 15545 NR_125980 26039 Hs.154429 NM_015558 ENSG00000184402 SS18L1 CREST|LP2261 SS18L1 subunit of BAF chromatin remodeling complex protein-coding chr7-5077 chr7 2153820 2154030 + 9.78 0.000 intron (NM_001013837, intron 10 of 18) AluSg|SINE|Alu -64873 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr4-1819 chr4 80552971 80553181 + 9.78 0.000 intron (NM_152770, intron 2 of 5) L1PA14|LINE|L1 217356 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr3-4039 chr3 71537265 71537475 + 9.78 0.000 intron (NR_146142, intron 2 of 19) intron (NR_146142, intron 2 of 19) 4719 NR_031697 100302112 NR_031697 ENSG00000221264 MIR1284 MIRN1284|hsa-mir-1284|mir-1284 microRNA 1284 ncRNA chr4-2842 chr4 52811779 52811989 + 9.78 0.000 intron (NR_040106, intron 4 of 4) L2a|LINE|L2 21890 NR_040106 152578 Hs.383806 NR_040106 ENSG00000250302 LINC01618 - long intergenic non-protein coding RNA 1618 ncRNA chr14-1634 chr14 104090432 104090642 + 9.78 0.000 intron (NM_001080464, intron 1 of 15) MLT1D|LTR|ERVL-MaLR 4837 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr22-4228 chr22 46620727 46620937 + 9.78 0.000 intron (NM_015124, intron 1 of 18) intron (NM_015124, intron 1 of 18) 446 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr12-3591 chr12 49095137 49095347 + 9.78 0.000 promoter-TSS (NM_021044) promoter-TSS (NM_021044) -441 NM_021044 50846 Hs.524382 NM_021044 ENSG00000139549 DHH GDXYM|HHG-3|SRXY7 desert hedgehog signaling molecule protein-coding chr3-4029 chr3 68415910 68416120 + 9.78 0.000 intron (NM_001252216, intron 2 of 4) MER20|DNA|hAT-Charlie -84622 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr10-6217 chr10 48542592 48542802 + 9.78 0.000 intron (NR_144642, intron 3 of 9) MER45C|DNA|hAT-Tip100 -31108 NR_146782 100689073 Hs.667964 NR_146782 ARHGAP22-IT1 - ARHGAP22 intronic transcript 1 ncRNA chr7-6470 chr7 2946660 2946870 + 9.78 0.000 intron (NM_001324281, intron 4 of 25) intron (NM_001324281, intron 4 of 25) 97102 NM_001324281 84433 Hs.648101 NM_032415 ENSG00000198286 CARD11 BENTA|BIMP3|CARMA1|IMD11|IMD11A|PPBL caspase recruitment domain family member 11 protein-coding chr2-9911 chr2 232432131 232432341 + 9.78 0.000 Intergenic Intergenic -23917 NM_001631 248 Hs.37009 NM_001631 ENSG00000163295 ALPI IAP alkaline phosphatase, intestinal protein-coding chr1-16092 chr1 203335619 203335829 + 9.78 0.000 Intergenic Intergenic 15398 NR_103757 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr3-5266 chr3 113261970 113262180 + 9.78 0.000 intron (NM_001301861, intron 4 of 19) intron (NM_001301861, intron 4 of 19) 49959 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr1-12651 chr1 43358108 43358318 + 9.78 0.000 promoter-TSS (NM_001255) promoter-TSS (NM_001255) -768 NM_001255 991 Hs.524947 NM_001255 ENSG00000117399 CDC20 CDC20A|bA276H19.3|p55CDC cell division cycle 20 protein-coding chr3-1536 chr3 184160716 184160926 + 9.78 0.000 intron (NM_004423, intron 1 of 14) intron (NM_004423, intron 1 of 14) 5444 NM_004423 1857 Hs.388116 NM_004423 ENSG00000161202 DVL3 DRS3 dishevelled segment polarity protein 3 protein-coding chr16-2040 chr16 50454563 50454773 + 9.78 0.000 Intergenic Intergenic -59535 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA chr12-3595 chr12 50641964 50642174 + 9.78 0.000 intron (NM_173602, intron 3 of 37) intron (NM_173602, intron 3 of 37) -122032 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr7-1844 chr7 149497075 149497285 + 9.78 0.000 intron (NM_152557, intron 1 of 6) CpG 627 NM_001163474 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr11-4224 chr11 64178642 64178852 + 9.78 0.000 Intergenic Intergenic -6525 NM_001282652 10963 Hs.337295 NM_006819 ENSG00000168439 STIP1 HEL-S-94n|HOP|IEF-SSP-3521|P60|STI1|STI1L stress induced phosphoprotein 1 protein-coding chr2-6144 chr2 231743429 231743639 + 9.78 0.000 intron (NM_002601, intron 1 of 4) intron (NM_002601, intron 1 of 4) 30220 NR_036052 100302285 NR_036052 ENSG00000284378 MIR1244-1 MIR1244|MIRN1244|hsa-mir-1244|hsa-mir-1244-1 microRNA 1244-1 ncRNA chr12-3370 chr12 96061969 96062179 + 9.78 0.000 Intergenic Intergenic -18554 NM_001256643 4048 Hs.524648 NM_000895 ENSG00000111144 LTA4H - leukotriene A4 hydrolase protein-coding chr9-4463 chr9 27572591 27572801 + 9.78 0.000 intron (NM_145005, intron 1 of 4) intron (NM_145005, intron 1 of 4) 785 NM_018325 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr5-4238 chr5 133977966 133978176 + 9.78 0.000 intron (NM_003374, intron 6 of 8) intron (NM_003374, intron 6 of 8) 9382 NR_134247 105379183 Hs.543907 NR_134247 LOC105379183 - uncharacterized LOC105379183 ncRNA chr12-4356 chr12 3301938 3302148 + 9.78 0.000 intron (NR_148995, intron 7 of 11) MIRb|SINE|MIR 64079 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr13-2127 chr13 94968326 94968536 + 9.78 0.000 Intergenic CpG 8390 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr4-3007 chr4 124862326 124862536 + 9.78 0.000 Intergenic L1MEi|LINE|L1 -149699 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr13-3207 chr13 20708763 20708973 + 9.78 0.000 intron (NM_138284, intron 2 of 2) AluY|SINE|Alu 5525 NM_138284 53342 Hs.655142 NM_138284 ENSG00000172458 IL17D IL-17D interleukin 17D protein-coding chr7-4507 chr7 462181 462391 + 9.78 0.000 Intergenic Intergenic 57558 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr6-4253 chr6 8252339 8252549 + 9.78 0.000 Intergenic L1MEf|LINE|L1 -149849 NR_037618 100526837 Hs.719272 NR_037618 EEF1E1-BLOC1S5 EEF1E1-MUTED EEF1E1-BLOC1S5 readthrough (NMD candidate) ncRNA chr1-13308 chr1 235634890 235635100 + 9.78 0.000 intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 14789 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr12-6574 chr12 121677305 121677515 + 9.78 0.000 Intergenic LTR16A2|LTR|ERVL -4766 NM_001363685 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 - MORN repeat containing 3 protein-coding chr5-7331 chr5 16619450 16619660 + 9.78 0.000 intron (NR_109946, intron 1 of 3) intron (NR_109946, intron 1 of 3) -2497 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr9-4564 chr9 88629207 88629417 + 9.78 0.000 Intergenic Intergenic 94134 NM_145283 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr6-7583 chr6 74038827 74039037 + 9.78 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -30519 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr11-6981 chr11 116263314 116263524 + 9.78 0.000 Intergenic Intergenic -376003 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr18-1590 chr18 38730992 38731202 + 9.78 0.000 Intergenic AluSx1|SINE|Alu 891078 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr8-3172 chr8 96591860 96592070 + 9.78 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -53277 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chrX-1484 chrX 136201907 136202117 + 9.78 0.000 intron (NM_001159699, intron 1 of 5) intron (NM_001159699, intron 1 of 5) -2890 NM_001369331 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr2-13629 chr2 159782937 159783147 + 9.78 0.000 intron (NM_001198764, intron 1 of 4) MIRb|SINE|MIR 15166 NM_014880 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr11-6721 chr11 79959016 79959226 + 9.78 0.000 Intergenic Intergenic -518091 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr2-7237 chr2 224520261 224520471 + 9.78 0.000 intron (NM_001257197, intron 2 of 14) intron (NM_001257197, intron 2 of 14) 49589 NM_001257198 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr11-7761 chr11 80993638 80993848 + 9.78 0.000 Intergenic Intergenic -230940 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr13-1746 chr13 110106883 110107093 + 9.78 0.000 Intergenic Intergenic -14714 NR_148221 105370361 Hs.134728 NR_148221 LOC105370361 - uncharacterized LOC105370361 ncRNA chr10-1896 chr10 113895209 113895419 + 9.78 0.000 intron (NM_198514, intron 5 of 10) L2a|LINE|L2 40653 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding chr10-1756 chr10 22816506 22816716 + 9.78 0.000 Intergenic Intergenic -102033 NM_005028 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr5-8399 chr5 126386261 126386471 + 9.78 0.000 intron (NM_001146319, intron 1 of 13) intron (NM_001146319, intron 1 of 13) 26246 NM_001146319 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr12-5841 chr12 42006782 42006992 + 9.78 0.000 Intergenic Intergenic 137987 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr22-2940 chr22 47669595 47669805 + 9.78 0.000 intron (NR_122046, intron 2 of 8) intron (NR_122046, intron 2 of 8) 38026 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA chr4-3588 chr4 2879228 2879438 + 9.78 0.000 intron (NM_014190, intron 2 of 15) L2c|LINE|L2 35183 NM_001286645 118 Hs.183706 NM_001119 ENSG00000087274 ADD1 ADDA adducin 1 protein-coding chr12-4175 chr12 90858102 90858312 + 9.78 0.000 Intergenic MER61F|LTR|ERV1 -59816 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr20-1685 chr20 35055745 35055955 + 9.78 0.000 intron (NM_199368, intron 4 of 18) intron (NM_199368, intron 4 of 18) 36957 NM_015638 26133 Hs.168073 NM_015638 ENSG00000100991 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel subfamily C member 4 associated protein protein-coding chr11-6796 chr11 89633440 89633650 + 9.78 0.000 Intergenic L1ME3A|LINE|L1 -25752 NM_153696 219595 Hs.645352 NM_153696 FOLH1B FOLH2|FOLHP|GCP3|GCPIII|PSM|PSMA-LIKE|PSMAL folate hydrolase 1B protein-coding chr2-1855 chr2 235765455 235765665 + 9.78 0.000 intron (NM_001037131, intron 6 of 17) intron (NM_001037131, intron 6 of 17) -247639 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chrX-3786 chrX 134477898 134478108 + 9.78 0.000 intron (NM_000194, intron 3 of 8) intron (NM_000194, intron 3 of 8) 17838 NM_000194 3251 Hs.412707 NM_000194 ENSG00000165704 HPRT1 HGPRT|HPRT hypoxanthine phosphoribosyltransferase 1 protein-coding chr13-3266 chr13 39516097 39516307 + 9.78 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 86991 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr12-2779 chr12 57468627 57468837 + 9.78 0.000 intron (NM_005269, intron 10 of 11) AluJr|SINE|Alu 8581 NM_001167609 2735 Hs.632702 NM_005269 ENSG00000111087 GLI1 GLI|PAPA8|PPD1 GLI family zinc finger 1 protein-coding chr5-6317 chr5 129014601 129014811 + 9.78 0.000 intron (NM_001017372, intron 4 of 9) HAL1|LINE|L1 49218 NM_001017372 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr12-2797 chr12 93100818 93101028 + 9.78 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -73443 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chrX-2366 chrX 68402990 68403200 + 9.78 0.000 intron (NM_002547, intron 2 of 24) intron (NM_002547, intron 2 of 24) 30400 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr9-3353 chr9 112180845 112181055 + 9.78 0.000 Intergenic Intergenic -5653 NM_022486 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr17-2797 chr17 6786750 6786960 + 9.78 0.000 exon (NM_153230, exon 3 of 4) exon (NM_153230, exon 3 of 4) 10640 NM_153230 162517 Hs.368364 NM_153230 ENSG00000177294 FBXO39 CT144|Fbx39 F-box protein 39 protein-coding chr12-2635 chr12 132051796 132052006 + 9.78 0.000 intron (NM_015409, intron 41 of 52) LTR13|LTR|ERVK 20677 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr15-5099 chr15 88746034 88746244 + 9.78 0.000 Intergenic L1M5|LINE|L1 -57297 NM_001369268 176 Hs.2159 NM_001135 ENSG00000157766 ACAN AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD aggrecan protein-coding chr11-2972 chr11 82978413 82978623 + 9.78 0.000 3' UTR (NM_001286060, exon 5 of 5) 3' UTR (NM_001286060, exon 5 of 5) 55756 NM_001286059 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr6-3490 chr6 12209342 12209552 + 9.78 0.000 Intergenic L2a|LINE|L2 -80914 NM_001168319 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr6-5087 chr6 118314104 118314314 + 9.78 0.000 exon (NM_001029858, exon 8 of 8) exon (NM_001029858, exon 8 of 8) -187164 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr17-5533 chr17 43652321 43652531 + 9.78 0.000 intron (NM_001040002, intron 2 of 3) intron (NM_001040002, intron 2 of 3) 9137 NM_013999 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr7-5649 chr7 55191878 55192088 + 9.78 0.000 intron (NM_001346941, intron 15 of 21) intron (NM_001346941, intron 15 of 21) -3034 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr3-4978 chr3 14831934 14832144 + 9.78 0.000 intron (NM_152536, intron 1 of 19) intron (NM_152536, intron 1 of 19) 13077 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr20-1136 chr20 38356095 38356305 + 9.78 0.000 intron (NM_004139, intron 5 of 14) (AC)n|Simple_repeat|Simple_repeat 9718 NM_004139 3929 Hs.154078 NM_004139 ENSG00000129988 LBP BPIFD2 lipopolysaccharide binding protein protein-coding chr12-7651 chr12 82806193 82806403 + 9.78 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 119143 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr6-3932 chr6 82936761 82936971 + 9.78 0.000 intron (NR_146807, intron 10 of 10) intron (NR_146807, intron 10 of 10) 128975 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr11-3866 chr11 77259680 77259890 + 9.78 0.000 intron (NM_182833, intron 10 of 16) L1MEc|LINE|L1 41881 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr1-3387 chr1 202647369 202647579 + 9.78 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) -4021 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr1-1582 chr1 28824228 28824438 + 9.78 0.000 intron (NM_000911, intron 1 of 2) AluY|SINE|Alu 12163 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chr18-1655 chr18 60469655 60469865 + 9.78 0.000 Intergenic L1MEc|LINE|L1 -96985 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr6-3717 chr6 1915541 1915751 + 9.78 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 260345 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr20-1761 chr20 50245536 50245746 + 9.78 0.000 Intergenic Intergenic -21845 NM_001278655 100506115 Hs.235484 NM_001278655 SMIM25 GCRL1|LINC01272 small integral membrane protein 25 protein-coding chr2-3548 chr2 18501296 18501506 + 9.78 0.000 Intergenic Intergenic 59252 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr2-6557 chr2 218745815 218746025 + 9.78 0.000 intron (NM_014640, intron 7 of 19) intron (NM_014640, intron 7 of 19) 35085 NM_014640 9654 Hs.471405 NM_014640 ENSG00000135912 TTLL4 - tubulin tyrosine ligase like 4 protein-coding chr15-1357 chr15 67890251 67890461 + 9.78 0.000 Intergenic L2b|LINE|L2 -50311 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr6-7981 chr6 114339966 114340176 + 9.78 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -277194 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr15-3475 chr15 94993476 94993686 + 9.78 0.000 Intergenic Intergenic 138218 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr7-3346 chr7 79434889 79435099 + 9.78 0.000 intron (NM_001301128, intron 1 of 20) MLT2B4|LTR|ERVL -17963 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr2-12177 chr2 40286268 40286478 + 9.78 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 143931 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chrX-2576 chrX 103586518 103586728 + 9.78 0.000 intron (NM_001300901, intron 4 of 4) intron (NM_001300901, intron 4 of 4) 1138 NM_001305840 79921 Hs.194329 NM_024863 ENSG00000133142 TCEAL4 NPD017|WEX7 transcription elongation factor A like 4 protein-coding chr2-9989 chr2 16377473 16377683 + 9.78 0.000 Intergenic AluJo|SINE|Alu 288256 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr2-10726 chr2 30072590 30072800 + 9.78 0.000 Intergenic MIRc|SINE|MIR -74312 NM_016061 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr19-2738 chr19 38210082 38210292 + 9.78 0.000 TTS (NM_001289978) TTS (NM_001289978) 14063 NM_001289978 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr2-14193 chr2 207560897 207561107 + 9.78 0.000 intron (NR_163947, intron 3 of 8) intron (NR_163947, intron 3 of 8) 1880 NM_001371428 chr5-3322 chr5 129795790 129796000 + 9.78 0.000 Intergenic L1PA7|LINE|L1 47801 NM_001257308 100127206 Hs.582534 NM_001257308 ENSG00000186367 MINAR2 KIAA1024L membrane integral NOTCH2 associated receptor 2 protein-coding chr5-5728 chr5 169049945 169050155 + 9.78 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 36823 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr20-2781 chr20 53941169 53941379 + 9.78 0.000 Intergenic Intergenic -65565 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr18-721 chr18 35006067 35006277 + 9.78 0.000 intron (NM_001143827, intron 2 of 7) intron (NM_001143827, intron 2 of 7) 27804 NM_001143827 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr4-3809 chr4 112133674 112133884 + 9.78 0.000 Intergenic Intergenic -11675 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr1-10698 chr1 191136627 191136837 + 9.78 0.000 Intergenic L1MCa|LINE|L1 91766 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr1-6950 chr1 156346670 156346880 + 9.78 0.000 exon (NM_144627, exon 4 of 4) exon (NM_144627, exon 4 of 4) 7873 NM_001304820 128229 Hs.534539 NM_144627 ENSG00000163467 TSACC C1orf182|SIP|SSTK-IP TSSK6 activating cochaperone protein-coding chr4-3228 chr4 52345954 52346164 + 9.78 0.000 Intergenic PRIMA41-int|LTR|ERV1 294755 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr9-7332 chr9 13665840 13666050 + 9.78 0.000 Intergenic AluSc8|SINE|Alu -234616 NR_033863 401492 Hs.632651 NR_033863 ENSG00000270547 LINC01235 - long intergenic non-protein coding RNA 1235 ncRNA chr1-10338 chr1 153648276 153648486 + 9.78 0.000 Intergenic Intergenic -10273 NR_052019 23557 Hs.32018 NM_012437 ENSG00000143553 SNAPIN BLOC1S7|BLOS7|BORCS3|SNAPAP SNAP associated protein protein-coding chr12-4933 chr12 69206862 69207072 + 9.78 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -32602 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr17-2600 chr17 79341482 79341692 + 9.78 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 174561 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr12-2116 chr12 59596100 59596310 + 9.78 0.000 5' UTR (NM_001270622, exon 1 of 6) 5' UTR (NM_001270622, exon 1 of 6) 176 NM_001270622 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr14-1533 chr14 60514512 60514722 + 9.78 0.000 Intergenic Intergenic 5471 NM_007374 4990 Hs.194756 NM_007374 ENSG00000184302 SIX6 MCOPCT2|ODRMD|OPTX2|Six9 SIX homeobox 6 protein-coding chr3-8192 chr3 41079121 41079331 + 9.78 0.000 Intergenic Intergenic -120279 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr9-3296 chr9 76161536 76161746 + 9.78 0.000 intron (NR_120409, intron 11 of 19) intron (NR_120409, intron 11 of 19) 232785 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr4-4735 chr4 93910741 93910951 + 9.78 0.000 Intergenic L1PA11|LINE|L1 82093 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr7-2315 chr7 101008399 101008609 + 9.78 0.000 intron (NM_001164462, intron 3 of 11) intron (NM_001164462, intron 3 of 11) 9104 NR_120519 102724094 Hs.571256 NR_120519 ENSG00000227053 LOC102724094 - uncharacterized LOC102724094 ncRNA chr2-5296 chr2 69309422 69309632 + 9.78 0.000 Intergenic Intergenic 77700 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr11-1819 chr11 14007672 14007882 + 9.78 0.000 intron (NM_006108, intron 2 of 15) intron (NM_006108, intron 2 of 15) 45054 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr6-7263 chr6 42785989 42786199 + 9.78 0.000 intron (NR_134654, intron 1 of 1) intron (NR_134654, intron 1 of 1) 2598 NR_134654 401261 Hs.656652 NM_001004322 LOC401261 - uncharacterized LOC401261 ncRNA chr5-3271 chr5 110288998 110289208 + 9.78 0.000 Intergenic Intergenic 224812 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr11-6102 chr11 35196847 35197057 + 9.78 0.000 intron (NM_000610, intron 6 of 17) intron (NM_000610, intron 6 of 17) 34002 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr20-3175 chr20 44280028 44280238 + 9.78 0.000 non-coding (NR_046353, exon 4 of 4) non-coding (NR_046353, exon 4 of 4) 31069 NM_001080472 128486 Hs.632269 NM_001080472 ENSG00000197296 FITM2 C20orf142|Fit2|dJ881L22.2 fat storage inducing transmembrane protein 2 protein-coding chr2-2662 chr2 218323285 218323495 + 9.78 0.000 exon (NM_022572, exon 1 of 9) exon (NM_022572, exon 1 of 9) 211 NM_022572 25953 Hs.98475 NM_015488 ENSG00000127838 PNKD BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR-1S|MR1|PDC|PKND1|PNKD1|TAHCCP2 PNKD metallo-beta-lactamase domain containing protein-coding chr11-3700 chr11 6250080 6250290 + 9.78 0.000 Intergenic Intergenic -9653 NM_176875 887 Hs.203 NM_176875 ENSG00000110148 CCKBR CCK-B|CCK2R|GASR cholecystokinin B receptor protein-coding chr7-3408 chr7 133235512 133235722 + 9.78 0.000 Intergenic Intergenic -17450 NM_001037126 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr3-11039 chr3 182836223 182836433 + 9.78 0.000 intron (NM_014616, intron 5 of 29) intron (NM_014616, intron 5 of 29) 42824 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr10-4480 chr10 79946371 79946581 + 9.78 0.000 exon (NM_003019, exon 2 of 8) exon (NM_003019, exon 2 of 8) 2629 NM_003019 6441 Hs.253495 NM_003019 ENSG00000133661 SFTPD COLEC7|PSP-D|SFTP4|SP-D surfactant protein D protein-coding chr2-2854 chr2 152525440 152525650 + 9.78 0.000 intron (NM_052905, intron 2 of 25) intron (NM_052905, intron 2 of 25) 190371 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr16-1968 chr16 75363119 75363329 + 9.78 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) 70279 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr20-1360 chr20 37029250 37029460 + 9.78 0.000 intron (NM_002895, intron 16 of 21) MER8|DNA|TcMar-Tigger 66642 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr17-5685 chr17 50809405 50809615 + 9.78 0.000 Intergenic Intergenic -25074 NM_001330341 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr20-1443 chr20 50285854 50286064 + 9.78 0.000 Intergenic Intergenic -6761 NR_034124 284751 Hs.282325 NM_001025463 ENSG00000203999 LINC01270 - long intergenic non-protein coding RNA 1270 ncRNA chr2-8616 chr2 143184035 143184245 + 9.78 0.000 intron (NM_018460, intron 2 of 13) intron (NM_018460, intron 2 of 13) 54721 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr3-3296 chr3 143832612 143832822 + 9.78 0.000 intron (NM_173653, intron 1 of 15) intron (NM_173653, intron 1 of 15) 15751 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr16-5447 chr16 1557889 1558099 + 9.78 0.000 exon (NM_014714, exon 19 of 31) exon (NM_014714, exon 19 of 31) -22533 NR_135176 105371046 Hs.663325 NR_135176 ENSG00000260989 LOC105371046 - uncharacterized LOC105371046 ncRNA chr1-14095 chr1 30586528 30586738 + 9.78 0.000 Intergenic MIR|SINE|MIR -132139 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr6-7441 chr6 54700660 54700870 + 9.78 0.000 Intergenic AluSx|SINE|Alu -146006 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr4-4522 chr4 66797734 66797944 + 9.78 0.000 Intergenic Intergenic 521015 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chrX-408 chrX 84187989 84188199 + 9.78 0.000 promoter-TSS (NM_001330512) promoter-TSS (NM_001330512) 105 NM_014496 27330 Hs.234478 NM_014496 ENSG00000072133 RPS6KA6 PP90RSK4|RSK-4|RSK4|S6K-alpha-6|p90RSK6 ribosomal protein S6 kinase A6 protein-coding chr13-3429 chr13 101053241 101053451 + 9.78 0.000 TTS (NM_052867) TTS (NM_052867) -108982 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr7-6569 chr7 69749276 69749486 + 9.78 0.000 intron (NM_015570, intron 1 of 18) L1MB8|LINE|L1 150906 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr14-3538 chr14 104421093 104421303 + 9.78 0.000 Intergenic Intergenic -158566 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr2-12936 chr2 101979228 101979438 + 9.78 0.000 Intergenic Intergenic -4132 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr10-1934 chr10 5538622 5538832 + 9.78 0.000 Intergenic Intergenic -12481 NR_120496 100132159 Hs.239600 NR_120496 CALML3-AS1 - CALML3 antisense RNA 1 ncRNA chr6-1979 chr6 158018306 158018516 + 9.78 0.000 intron (NM_003898, intron 2 of 26) intron (NM_003898, intron 2 of 26) 1318 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr3-6189 chr3 61071556 61071766 + 9.78 0.000 intron (NR_148922, intron 2 of 3) L1ME4a|LINE|L1 179791 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr3-2900 chr3 49641518 49641728 + 9.78 0.000 intron (NM_003458, intron 2 of 11) intron (NM_003458, intron 2 of 11) -32728 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr16-1528 chr16 56600477 56600687 + 9.78 0.000 Intergenic L2c|LINE|L2 -8002 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT-2|MT-II|MT2 metallothionein 2A protein-coding chr2-6060 chr2 135299983 135300193 + 9.78 0.000 intron (NM_001286569, intron 8 of 21) intron (NM_001286569, intron 8 of 21) 163460 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr2-13208 chr2 122118689 122118899 + 9.78 0.000 Intergenic L1MA4A|LINE|L1 363143 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr8-6488 chr8 63646260 63646470 + 9.78 0.000 Intergenic Intergenic -123065 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr16-1962 chr16 69567411 69567621 + 9.78 0.000 intron (NM_173215, intron 1 of 13) intron (NM_173215, intron 1 of 13) 1550 NM_173214 10725 Hs.371987 NM_006599 ENSG00000102908 NFAT5 NF-AT5|NFATL1|NFATZ|OREBP|TONEBP nuclear factor of activated T cells 5 protein-coding chr21-937 chr21 41210512 41210722 + 9.78 0.000 intron (NM_138991, intron 1 of 7) MER49|LTR|ERV1 -25378 NR_148920 191585 Hs.472492 NR_148920 ENSG00000280109 PLAC4 C21orf115|PRED78 placenta enriched 4 ncRNA chr10-2701 chr10 102410185 102410395 + 9.78 0.000 intron (NM_002779, intron 10 of 16) intron (NM_002779, intron 10 of 16) -1013 NR_073110 5662 Hs.154658 NM_002779 ENSG00000059915 PSD EFA6|EFA6A|PSD1|TYL pleckstrin and Sec7 domain containing protein-coding chr13-2818 chr13 102977680 102977890 + 9.78 0.000 Intergenic Intergenic 88632 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr15-1826 chr15 40695750 40695960 + 9.78 0.000 promoter-TSS (NR_040058) promoter-TSS (NR_040058) 681 NM_133487 5888 Hs.631709 NM_002875 ENSG00000051180 RAD51 BRCC5|FANCR|HRAD51|HsRad51|HsT16930|MRMV2|RAD51A|RECA RAD51 recombinase protein-coding chr12-2696 chr12 108114226 108114436 + 9.78 0.000 Intergenic Intergenic -14957 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr12-5762 chr12 1547928 1548138 + 9.78 0.000 Intergenic MER119|DNA|hAT-Charlie -15841 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr6-1150 chr6 169241452 169241662 + 9.78 0.000 intron (NM_003247, intron 6 of 22) intron (NM_003247, intron 6 of 22) 12557 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr19-4798 chr19 34973144 34973354 + 9.78 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -9020 NM_175872 126375 Hs.50405 NM_175872 ENSG00000180884 ZNF792 - zinc finger protein 792 protein-coding chr2-7339 chr2 191567 191777 + 9.78 0.000 Intergenic LTR12C|LTR|ERV1 64668 NM_001282687 26751 Hs.515951 NM_015677 ENSG00000035115 SH3YL1 RAY SH3 and SYLF domain containing 1 protein-coding chr12-4446 chr12 11746088 11746298 + 9.78 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 96339 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr11-2913 chr11 65068191 65068401 + 9.78 0.000 Intergenic Intergenic -9743 NM_005468 10004 Hs.13967 NM_005468 ENSG00000168060 NAALADL1 I100|NAALADASEL N-acetylated alpha-linked acidic dipeptidase like 1 protein-coding chr14-687 chr14 101823690 101823900 + 9.78 0.000 intron (NM_001161725, intron 3 of 15) intron (NM_001161725, intron 3 of 15) 13932 NM_001352912 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr1-6830 chr1 97654931 97655141 + 9.78 0.000 intron (NM_000110, intron 8 of 22) THE1B|LTR|ERVL-MaLR -141885 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr2-10250 chr2 118113022 118113232 + 9.78 0.000 Intergenic Intergenic 24577 NM_001321332 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding chr19-4152 chr19 35043163 35043373 + 9.78 0.000 intron (NM_002151, intron 3 of 13) intron (NM_002151, intron 3 of 13) 2762 NM_002151 3249 Hs.182385 NM_002151 ENSG00000105707 HPN TMPRSS1 hepsin protein-coding chr4-747 chr4 145936528 145936738 + 9.78 0.000 intron (NM_178835, intron 1 of 14) CpG 2190 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr10-2021 chr10 69731518 69731728 + 9.78 0.000 Intergenic Intergenic -70283 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr22-2329 chr22 40212241 40212451 + 9.78 0.000 intron (NM_015088, intron 1 of 20) intron (NM_015088, intron 1 of 20) 34421 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr13-3115 chr13 72619082 72619292 + 9.78 0.000 Intergenic Intergenic 108442 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr7-5923 chr7 98979950 98980160 + 9.78 0.000 intron (NM_003496, intron 56 of 70) intron (NM_003496, intron 56 of 70) -33110 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr10-6499 chr10 55314048 55314258 + 9.78 0.000 intron (NM_001354404, intron 2 of 34) (ATTATAA)n|Simple_repeat|Simple_repeat -284889 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding chr6-1737 chr6 43297803 43298013 + 9.78 0.000 promoter-TSS (NM_006672) promoter-TSS (NM_006672) -352 NM_006672 10864 Hs.485438 NM_006672 ENSG00000137204 SLC22A7 NLT|OAT2|hOAT11 solute carrier family 22 member 7 protein-coding chr12-2681 chr12 68245333 68245543 + 9.78 0.000 Intergenic MER83A-int|LTR|ERV1 8166 NM_020525 50616 Hs.287369 NM_020525 ENSG00000127318 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding chr6-3023 chr6 51112563 51112773 + 9.78 0.000 Intergenic Intergenic 293797 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr14-2062 chr14 67667246 67667456 + 9.78 0.000 intron (NM_006370, intron 1 of 5) intron (NM_006370, intron 1 of 5) 7281 NM_006370 10490 Hs.741177 NM_006370 ENSG00000100568 VTI1B VTI1|VTI1-LIKE|VTI1L|VTI2|v-SNARE|vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding chr1-9895 chr1 69523044 69523254 + 9.78 0.000 Intergenic LTR78|LTR|ERV1 -44185 NM_001366839 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr3-3484 chr3 193763001 193763211 + 9.78 0.000 Intergenic Intergenic 80903 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr17-3619 chr17 1966287 1966497 + 9.78 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -51324 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr22-1775 chr22 29073849 29074059 + 9.78 0.000 intron (NM_001039570, intron 1 of 8) CpG 919 NM_032045 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 ECTD13|KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr18-2144 chr18 56815861 56816071 + 9.78 0.000 intron (NM_015285, intron 19 of 27) intron (NM_015285, intron 19 of 27) 164581 NM_052834 23335 Hs.465213 NM_015285 ENSG00000091157 WDR7 TRAG WD repeat domain 7 protein-coding chr6-6254 chr6 34082352 34082562 + 9.78 0.000 intron (NM_001282847, intron 2 of 9) intron (NM_001282847, intron 2 of 9) 23510 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr2-2694 chr2 26284231 26284441 + 9.78 0.000 intron (NM_001281512, intron 12 of 14) intron (NM_001281512, intron 12 of 14) 34713 NM_001145168 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr20-549 chr20 65034 65244 + 9.78 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -22533 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr11-7948 chr11 4600343 4600553 + 9.78 0.000 exon (NM_001304496, exon 6 of 6) exon (NM_001304496, exon 6 of 6) 6409 NM_001005169 390037 Hs.553727 NM_001005169 ENSG00000232268 OR52I1 OR11-13 olfactory receptor family 52 subfamily I member 1 protein-coding chr8-2144 chr8 26327645 26327855 + 9.78 0.000 intron (NM_001177591, intron 2 of 9) intron (NM_001177591, intron 2 of 9) 34534 NM_001177591 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr2-10903 chr2 70599875 70600085 + 9.78 0.000 Intergenic L1MD1|LINE|L1 -46154 NM_003236 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr6-3984 chr6 111857205 111857415 + 9.78 0.000 intron (NM_153047, intron 1 of 13) intron (NM_153047, intron 1 of 13) 15761 NM_153047 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr1-5818 chr1 216626653 216626863 + 9.78 0.000 intron (NM_001243505, intron 3 of 6) L2|LINE|L2 96671 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr5-6737 chr5 76577075 76577285 + 9.78 0.000 intron (NM_006633, intron 5 of 35) intron (NM_006633, intron 5 of 35) 29771 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr3-3404 chr3 74443271 74443481 + 9.78 0.000 intron (NM_020872, intron 3 of 21) intron (NM_020872, intron 3 of 21) 77764 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr13-2328 chr13 33218216 33218426 + 9.78 0.000 intron (NM_001243476, intron 5 of 17) LTR32|LTR|ERVL -12271 NM_001243474 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr10-4034 chr10 17527698 17527908 + 9.78 0.000 Intergenic Intergenic -73208 NM_001345961 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr19-3058 chr19 2385293 2385503 + 9.78 0.000 Intergenic Intergenic -4373 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr4-5916 chr4 143020077 143020287 + 9.78 0.000 Intergenic L1MA5|LINE|L1 164679 NR_136203 105377623 NR_136203 ENSG00000250326 LOC105377623 - uncharacterized LOC105377623 ncRNA chr1-6074 chr1 97174171 97174381 + 9.78 0.000 intron (NM_000110, intron 20 of 22) intron (NM_000110, intron 20 of 22) 78353 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chrX-1967 chrX 9649123 9649333 + 9.78 0.000 intron (NM_001139467, intron 3 of 16) intron (NM_001139467, intron 3 of 16) 116619 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr18-3585 chr18 80168017 80168227 + 9.78 0.000 intron (NR_028339, intron 2 of 2) intron (NR_028339, intron 2 of 2) 20198 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr12-2423 chr12 49537756 49537966 + 9.78 0.000 Intergenic CpG -1169 NM_001314030 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr3-4583 chr3 184225470 184225680 + 9.78 0.000 Intergenic AluSx1|SINE|Alu -4778 NM_138345 90113 Hs.584997 NM_138345 ENSG00000145198 VWA5B2 - von Willebrand factor A domain containing 5B2 protein-coding chr7-5342 chr7 28855829 28856039 + 9.78 0.000 Intergenic Intergenic 102396 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr7-9167 chr7 113898309 113898519 + 9.78 0.000 intron (NM_002711, intron 1 of 3) L2c|LINE|L2 20595 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr5-2483 chr5 144192105 144192315 + 9.78 0.000 intron (NM_020768, intron 2 of 3) intron (NM_020768, intron 2 of 3) -13181 NM_001370487 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr4-1823 chr4 85102567 85102777 + 9.78 0.000 Intergenic Intergenic 135188 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr12-4592 chr12 32156448 32156658 + 9.78 0.000 intron (NR_148725, intron 1 of 9) intron (NR_148725, intron 1 of 9) 49706 NM_001354189 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr12-7707 chr12 90959643 90959853 + 9.78 0.000 Intergenic Intergenic -4572 NR_130711 196477 Hs.128574 NM_152638 ENSG00000197651 CCER1 C12orf12 coiled-coil glutamate rich protein 1 protein-coding chr2-11395 chr2 216806284 216806494 + 9.78 0.000 Intergenic AluSc|SINE|Alu 53675 NM_003284 7141 Hs.3017 NM_003284 ENSG00000118245 TNP1 TP1 transition protein 1 protein-coding chr3-7287 chr3 6174085 6174295 + 9.78 0.000 Intergenic Intergenic 631259 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr11-3709 chr11 10164825 10165035 + 9.78 0.000 intron (NM_030962, intron 2 of 39) intron (NM_030962, intron 2 of 39) 129277 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr12-3376 chr12 99618792 99619002 + 9.78 0.000 intron (NM_152788, intron 9 of 25) L1PA17|LINE|L1 -28856 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr2-2633 chr2 96747768 96747978 + 9.78 0.000 Intergenic MIRb|SINE|MIR -7781 NM_001322351 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr1-6503 chr1 24541160 24541370 + 9.78 0.000 TTS (NM_001251977) TTS (NM_001251977) 14759 NR_109781 100506985 Hs.607088 NR_109781 NCMAP-DT - NCMAP divergent transcript ncRNA chrX-3442 chrX 21865582 21865792 + 9.78 0.000 intron (NM_015884, intron 5 of 10) intron (NM_015884, intron 5 of 10) 9700 NM_206923 404281 Hs.673601 NM_206923 ENSG00000230797 YY2 ZNF631 YY2 transcription factor protein-coding chr2-5880 chr2 240719693 240719903 + 9.78 0.000 exon (NM_001244008, exon 46 of 49) exon (NM_001244008, exon 46 of 49) 27932 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr19-2350 chr19 48283996 48284206 + 9.78 0.000 intron (NM_001369812, intron 5 of 5) LTR26|LTR|ERV1 12814 NM_001369812 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr2-8139 chr2 82209449 82209659 + 9.78 0.000 Intergenic L1PB1|LINE|L1 -647249 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr7-2849 chr7 105493928 105494138 + 9.78 0.000 intron (NM_001318164, intron 6 of 15) intron (NM_001318164, intron 6 of 15) 14487 NM_001318163 54517 Hs.520619 NM_019042 ENSG00000091127 PUS7 IDDABS pseudouridine synthase 7 protein-coding chr6-3998 chr6 116190510 116190720 + 9.78 0.000 intron (NM_152729, intron 6 of 11) intron (NM_152729, intron 6 of 11) 63460 NM_021648 23270 Hs.284141 NM_021648 ENSG00000187189 TSPYL4 dJ486I3.2 TSPY like 4 protein-coding chr3-11159 chr3 189555606 189555816 + 9.78 0.000 Intergenic Intergenic -41035 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr1-8649 chr1 204916012 204916222 + 9.78 0.000 intron (NM_001160332, intron 1 of 27) intron (NM_001160332, intron 1 of 27) -28109 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr10-9029 chr10 123238871 123239081 + 9.78 0.000 Intergenic Intergenic 84574 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr7-1928 chr7 33195353 33195563 + 9.78 0.000 intron (NM_198428, intron 5 of 22) intron (NM_198428, intron 5 of 22) 65894 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr2-7072 chr2 169028546 169028756 + 9.78 0.000 intron (NM_003742, intron 1 of 27) L2b|LINE|L2 2673 NM_003742 8647 Hs.158316 NM_003742 ENSG00000073734 ABCB11 ABC16|BRIC2|BSEP|PFIC-2|PFIC2|PGY4|SPGP ATP binding cassette subfamily B member 11 protein-coding chr3-9890 chr3 82685836 82686046 + 9.78 0.000 Intergenic Intergenic 699799 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr22-1472 chr22 17266352 17266562 + 9.78 0.000 intron (NR_038398, intron 1 of 2) intron (NR_038398, intron 1 of 2) 276 NR_038398 27442 Hs.517394 NR_038398 ENSG00000241832 CECR3 - cat eye syndrome chromosome region, candidate 3 ncRNA chr2-4685 chr2 218067538 218067748 + 9.78 0.000 intron (NR_034176, intron 3 of 13) intron (NR_034176, intron 3 of 13) -1372 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr11-5544 chr11 95342985 95343195 + 9.78 0.000 Intergenic MIRb|SINE|MIR -110615 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr12-2227 chr12 54428654 54428864 + 9.78 0.000 intron (NR_120487, intron 3 of 3) intron (NR_120487, intron 3 of 3) 8974 NR_120488 102724050 Hs.670941 NR_120486 ENSG00000258137 LOC102724050 - uncharacterized LOC102724050 ncRNA chr7-4021 chr7 151219323 151219533 + 9.78 0.000 intron (NM_005692, intron 7 of 15) intron (NM_005692, intron 7 of 15) 7777 NR_160983 114483834 Hs.654958 NM_005692 LOC114483834 - ABCF2-H2B readthrough protein-coding chrX-1190 chrX 65705952 65706162 + 9.78 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 38403 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr17-4004 chr17 73385522 73385732 + 9.78 0.000 intron (NM_001144952, intron 32 of 44) MIRc|SINE|MIR -73626 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chrX-3562 chrX 69199189 69199399 + 9.78 0.000 intron (NR_103715, intron 1 of 4) MIR|SINE|MIR 19737 NR_103715 100996279 NR_103715 ENSG00000215162 LINC00269 CXorf62|NCRNA00269 long intergenic non-protein coding RNA 269 ncRNA chr2-2670 chr2 222318285 222318495 + 9.78 0.000 promoter-TSS (NR_136638) promoter-TSS (NR_136638) -81 NR_136638 440934 Hs.732732 NR_136638 ENSG00000237732 CT75 - cancer/testis associated transcript 75 ncRNA chr3-7257 chr3 196150654 196150864 + 9.78 0.000 intron (NR_034088, intron 2 of 2) Plat_L3|LINE|CR1 8123 NR_034088 401109 Hs.280133 NM_001001699 ENSG00000224652 LINC00885 - long intergenic non-protein coding RNA 885 ncRNA chr2-11107 chr2 129721491 129721701 + 9.78 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 155895 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr11-4364 chr11 74539082 74539292 + 9.78 0.000 Intergenic L1M4b|LINE|L1 -45463 NM_001144869 387787 Hs.591971 NM_001144869 ENSG00000175536 LIPT2 - lipoyl(octanoyl) transferase 2 protein-coding chr15-4171 chr15 93739245 93739455 + 9.78 0.000 Intergenic L1PA13|LINE|L1 -117210 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr2-11390 chr2 216592233 216592443 + 9.78 0.000 intron (NR_110392, intron 3 of 3) intron (NR_110392, intron 3 of 3) 14600 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr11-4810 chr11 7728737 7728947 + 9.78 0.000 Intergenic Intergenic -22365 NM_198185 341277 Hs.532475 NM_198185 ENSG00000183378 OVCH2 OVTN ovochymase 2 (gene/pseudogene) protein-coding chr7-6683 chr7 155114021 155114231 + 9.78 0.000 Intergenic Intergenic -42569 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chr2-6643 chr2 2148254 2148464 + 9.78 0.000 intron (NM_015025, intron 3 of 24) MER1B|DNA|hAT-Charlie -170873 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr5-7484 chr5 34608698 34608908 + 9.78 0.000 Intergenic Intergenic -47525 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr4-3946 chr4 172175456 172175666 + 9.78 0.000 intron (NM_001034845, intron 2 of 12) intron (NM_001034845, intron 2 of 12) -361954 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr2-5524 chr2 152088947 152089157 + 9.78 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) 9711 NM_001330113 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr12-3092 chr12 15540573 15540783 + 9.78 0.000 intron (NM_030667, intron 12 of 26) intron (NM_030667, intron 12 of 26) -5933 NM_030669 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr4-5081 chr4 146564786 146564996 + 9.78 0.000 Intergenic MER41B|LTR|ERV1 -42920 NM_001317817 84068 Hs.659209 NM_032128 ENSG00000120519 SLC10A7 C4orf13|P7|SSASKS solute carrier family 10 member 7 protein-coding chr7-6430 chr7 158497801 158498011 + 9.78 0.000 intron (NM_130843, intron 1 of 21) intron (NM_130843, intron 1 of 21) 34907 NR_030325 693180 NR_030325 ENSG00000207637 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA chr1-4219 chr1 150718134 150718344 + 9.78 0.000 intron (NM_032132, intron 2 of 14) L1MB7|LINE|L1 2656 NM_001199829 84072 Hs.298312 NM_032132 ENSG00000143452 HORMAD1 CT46|NOHMA HORMA domain containing 1 protein-coding chr8-4532 chr8 123202424 123202634 + 9.78 0.000 non-coding (NR_024479, exon 1 of 3) non-coding (NR_024479, exon 1 of 3) 214 NR_024479 100131726 Hs.660862 NR_024479 ENSG00000204949 FAM83A-AS1 HCCC11|HCCC11_v1|HCCC11_v2 FAM83A antisense RNA 1 ncRNA chr21-605 chr21 21807514 21807724 + 9.78 0.000 Intergenic Intergenic 60634 NR_109958 101927821 Hs.334181 NR_109958 ENSG00000233997 LINC01425 - long intergenic non-protein coding RNA 1425 ncRNA chr2-12188 chr2 41291925 41292135 + 9.78 0.000 Intergenic Intergenic -585525 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr17-1869 chr17 39622067 39622277 + 9.78 0.000 Intergenic Intergenic -4780 NM_032192 84152 Hs.286192 NM_032192 ENSG00000131771 PPP1R1B DARPP-32|DARPP32 protein phosphatase 1 regulatory inhibitor subunit 1B protein-coding chr5-2277 chr5 37776853 37777063 + 9.78 0.000 Intergenic Intergenic 57864 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr9-2728 chr9 94135375 94135585 + 9.78 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -40477 NR_029476 406881 NR_029476 ENSG00000199165 MIRLET7A1 LET7A1|MIRNLET7A1|let-7a-1 microRNA let-7a-1 ncRNA chr9-3376 chr9 126496528 126496738 + 9.78 0.000 intron (NM_033446, intron 9 of 9) L2c|LINE|L2 -86129 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr6-3809 chr6 33933971 33934181 + 9.78 0.000 Intergenic MER21B|LTR|ERVL 34941 NR_106982 102466816 NR_106982 ENSG00000276824 MIR7159 hsa-mir-7159 microRNA 7159 ncRNA chr14-3652 chr14 79467499 79467709 + 9.78 0.000 intron (NR_073547, intron 15 of 20) intron (NR_073547, intron 15 of 20) 188224 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr8-2784 chr8 120785095 120785305 + 9.78 0.000 intron (NM_021021, intron 1 of 6) L1PBa|LINE|L1 23947 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr2-4539 chr2 44062962 44063172 + 9.78 0.000 Intergenic Intergenic -67078 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr7-3650 chr7 44094987 44095197 + 9.78 0.000 Intergenic L1MC5|LINE|L1 -9253 NM_001129 165 Hs.439463 NM_001129 ENSG00000106624 AEBP1 ACLP AE binding protein 1 protein-coding chr7-5407 chr7 34497203 34497413 + 9.78 0.000 intron (NR_033665, intron 2 of 3) intron (NR_033665, intron 2 of 3) -160910 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr4-6554 chr4 181746220 181746430 + 9.78 0.000 Intergenic L2a|LINE|L2 83648 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr17-3210 chr17 3679715 3679925 + 9.78 0.000 intron (NM_175080, intron 9 of 10) intron (NM_175080, intron 9 of 10) 11008 NM_031298 83460 Hs.30011 NM_031298 ENSG00000127774 EMC6 RAB5IFL|TMEM93 ER membrane protein complex subunit 6 protein-coding chr8-4990 chr8 140981551 140981761 + 9.78 0.000 intron (NM_001352719, intron 1 of 32) MER58B|DNA|hAT-Charlie 19348 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr14-1278 chr14 75535326 75535536 + 9.78 0.000 intron (NM_006399, intron 2 of 2) L1ME4c|LINE|L1 12962 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr12-3231 chr12 57263811 57264021 + 9.78 0.000 intron (NM_001351215, intron 18 of 22) intron (NM_001351215, intron 18 of 22) -12729 NM_001286257 246329 Hs.417595 NM_145064 ENSG00000185482 STAC3 MYPBB|NAM SH3 and cysteine rich domain 3 protein-coding chr7-3712 chr7 56362049 56362259 + 9.78 0.000 Intergenic AluSq|SINE|Alu 86221 NR_029420 650226 Hs.448401 NR_029420 LOC650226 - ankyrin repeat domain 26 pseudogene pseudo chr6-3306 chr6 162158862 162159072 + 9.78 0.000 intron (NM_004562, intron 4 of 11) intron (NM_004562, intron 4 of 11) -568165 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr2-4282 chr2 231925362 231925572 + 9.78 0.000 exon (NM_024409, exon 2 of 3) exon (NM_024409, exon 2 of 3) 929 NM_024409 4880 Hs.247916 NM_024409 ENSG00000163273 NPPC CNP|CNP2 natriuretic peptide C protein-coding chrX-1503 chrX 7839668 7839878 + 9.78 0.000 Intergenic THE1A|LTR|ERVL-MaLR -2489 NM_013452 26609 Hs.278906 NM_013452 ENSG00000182583 VCX VCX-10r|VCX-B1|VCX1|VCX10R|VCXB1 variable charge X-linked protein-coding chr20-981 chr20 49583874 49584084 + 9.78 0.000 Intergenic MIR3|SINE|MIR -15842 NM_000961 5740 Hs.302085 NM_000961 ENSG00000124212 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 synthase protein-coding chr10-4399 chr10 55778318 55778528 + 9.78 0.000 Intergenic L1MB1|LINE|L1 -150481 NM_001354404 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding chr12-3429 chr12 111189864 111190074 + 9.78 0.000 intron (NM_001370598, intron 1 of 21) L1ME3A|LINE|L1 89965 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr6-3615 chr6 109397081 109397291 + 9.78 0.000 intron (NM_001286361, intron 5 of 5) LTR104_Mam|LTR|Gypsy -14374 NM_001142404 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr14-2275 chr14 35368581 35368791 + 9.78 0.000 Intergenic Intergenic 36068 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr16-3072 chr16 60236189 60236399 + 9.78 0.000 Intergenic MER57D|LTR|ERV1 123499 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr12-2388 chr12 27640840 27641050 + 9.78 0.000 intron (NM_003622, intron 4 of 29) intron (NM_003622, intron 4 of 29) -55502 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr4-2874 chr4 75634008 75634218 + 9.78 0.000 Intergenic L1MB7|LINE|L1 -3585 NM_003948 8999 Hs.591698 NM_003948 ENSG00000138769 CDKL2 KKIAMRE|P56 cyclin dependent kinase like 2 protein-coding chr5-6786 chr5 90561921 90562131 + 9.78 0.000 intron (NR_003149, intron 1 of 89) intron (NR_003149, intron 1 of 89) 3229 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr2-13436 chr2 143040780 143040990 + 9.78 0.000 intron (NM_001199241, intron 14 of 14) intron (NM_001199241, intron 14 of 14) -88534 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr16-2237 chr16 89467273 89467483 + 9.78 0.000 intron (NM_001256182, intron 1 of 13) AluJb|SINE|Alu 23183 NR_045839 29123 Hs.335003 NM_013275 ENSG00000167522 ANKRD11 ANCO-1|ANCO1|LZ16|T13 ankyrin repeat domain 11 protein-coding chr9-7458 chr9 27353151 27353361 + 9.78 0.000 intron (NM_024761, intron 3 of 3) MER5A1|DNA|hAT-Charlie -56106 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chr6-1219 chr6 83431019 83431229 + 9.78 0.000 promoter-TSS (NM_002395) promoter-TSS (NM_002395) -73 NM_002395 4199 Hs.21160 NM_002395 ENSG00000065833 ME1 HUMNDME|MES malic enzyme 1 protein-coding chr1-16014 chr1 199096928 199097138 + 9.78 0.000 Intergenic HERV9-int|LTR|ERV1 -51565 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr16-6029 chr16 9631911 9632121 + 9.78 0.000 Intergenic L2c|LINE|L2 -176511 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr8-2439 chr8 107315418 107315628 + 9.78 0.000 intron (NM_001199859, intron 4 of 8) intron (NM_001199859, intron 4 of 8) 20992 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr3-6696 chr3 132542958 132543168 + 9.78 0.000 Intergenic Intergenic -54207 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr16-3248 chr16 87326202 87326412 + 9.78 0.000 TTS (NM_001282683) TTS (NM_001282683) 8798 NR_135180 101928659 Hs.667450 NR_135180 ENSG00000270006 LOC101928659 - uncharacterized LOC101928659 ncRNA chr4-4977 chr4 132860373 132860583 + 9.78 0.000 Intergenic L1MC3|LINE|L1 269389 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr10-7826 chr10 43413214 43413424 + 9.78 0.000 Intergenic MIR|SINE|MIR -4071 NM_001098204 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr1-14036 chr1 27455371 27455581 + 9.78 0.000 intron (NM_006990, intron 1 of 8) intron (NM_006990, intron 1 of 8) 34691 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr12-1310 chr12 9674037 9674247 + 9.78 0.000 intron (NM_001197319, intron 1 of 2) L1PA10|LINE|L1 4429 NM_013269 29121 Hs.268326 NM_013269 ENSG00000069493 CLEC2D CLAX|LLT1|OCIL C-type lectin domain family 2 member D protein-coding chr20-941 chr20 24622957 24623167 + 9.78 0.000 intron (NM_024893, intron 3 of 3) AluSx|SINE|Alu 153101 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chrX-756 chrX 20362802 20363012 + 9.78 0.000 Intergenic Intergenic -95998 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr14-3470 chr14 101438039 101438249 + 9.78 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -3932 NR_135240 100507277 Hs.123543 NR_135240 ENSG00000259082 LINC02314 - long intergenic non-protein coding RNA 2314 ncRNA chr11-5269 chr11 34549728 34549938 + 9.78 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -36039 NM_001243080 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr1-15879 chr1 182945565 182945775 + 9.78 0.000 intron (NM_030933, intron 2 of 9) HAL1|LINE|L1 7496 NM_001345928 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr12-3439 chr12 111767306 111767516 + 9.78 0.000 intron (NM_000690, intron 1 of 12) intron (NM_000690, intron 1 of 12) 478 NM_001204889 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr2-7733 chr2 36597083 36597293 + 9.78 0.000 intron (NM_005102, intron 1 of 7) intron (NM_005102, intron 1 of 7) 980 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr17-6013 chr17 78239727 78239937 + 9.78 0.000 3' UTR (NM_001204211, exon 5 of 5) 3' UTR (NM_001204211, exon 5 of 5) 8522 NM_001204210 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr17-7855 chr17 42179073 42179283 + 9.78 0.000 intron (NM_012285, intron 1 of 16) intron (NM_012285, intron 1 of 16) 1964 NM_012285 23415 Hs.304081 NM_012285 ENSG00000089558 KCNH4 BEC2|ELK1|Kv12.3 potassium voltage-gated channel subfamily H member 4 protein-coding chr11-10281 chr11 104105073 104105283 + 9.78 0.000 intron (NM_025208, intron 1 of 6) MIRb|SINE|MIR 58969 NM_025208 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr6-2440 chr6 169219309 169219519 + 9.78 0.000 intron (NM_003247, intron 22 of 22) (ATGG)n|Simple_repeat|Simple_repeat 6202 NR_134621 101929523 Hs.442696 NR_134621 ENSG00000226445 LOC101929523 - uncharacterized LOC101929523 ncRNA chr1-15150 chr1 105433462 105433672 + 9.78 0.000 Intergenic Intergenic 185368 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr17-4877 chr17 66848404 66848614 + 9.78 0.000 intron (NM_145811, intron 1 of 5) intron (NM_145811, intron 1 of 5) 13392 NM_145811 27091 Hs.278907 NM_014404 ENSG00000075429 CACNG5 - calcium voltage-gated channel auxiliary subunit gamma 5 protein-coding chr20-2183 chr20 48849516 48849726 + 9.78 0.000 Intergenic L1ME3G|LINE|L1 -21622 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr6-7764 chr6 94591753 94591963 + 9.78 0.000 Intergenic MER33|DNA|hAT-Charlie 873555 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr14-4671 chr14 55609577 55609787 + 9.78 0.000 intron (NR_073129, intron 2 of 45) intron (NR_073129, intron 2 of 45) 29475 NM_001079521 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding chr4-4961 chr4 129742432 129742642 + 9.78 0.000 intron (NR_110753, intron 3 of 4) L2a|LINE|L2 28941 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr12-2010 chr12 24562126 24562336 + 9.78 0.000 intron (NM_152989, intron 1 of 17) CpG 260 NM_001261414 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr20-2251 chr20 2525489 2525699 + 9.78 0.000 Intergenic MER41B|LTR|ERV1 -1072 NM_001282495 79175 Hs.516846 NM_024325 ENSG00000088876 ZNF343 dJ734P14.5 zinc finger protein 343 protein-coding chr17-5579 chr17 47077671 47077881 + 9.78 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -98523 NM_203400 388394 Hs.367999 NM_203400 ENSG00000179673 RPRML - reprimo like protein-coding chr14-1526 chr14 57637799 57638009 + 9.78 0.000 intron (NM_001352014, intron 1 of 9) MER49|LTR|ERV1 -144047 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr3-5079 chr3 45223921 45224131 + 9.78 0.000 TTS (NM_015444) TTS (NM_015444) 2261 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr19-2152 chr19 6403338 6403548 + 9.78 0.000 intron (NM_001321601, intron 1 of 2) MIR|SINE|MIR 7084 NM_001321601 390877 Hs.715420 NM_001321601 LOC390877 - adenylate kinase isoenzyme 1-like protein-coding chr14-4757 chr14 62417293 62417503 + 9.78 0.000 Intergenic AluSq2|SINE|Alu -277425 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr2-8429 chr2 119409540 119409750 + 9.78 0.000 Intergenic L1MA3|LINE|L1 -22209 NM_183240 140738 Hs.26216 NM_183240 ENSG00000171227 TMEM37 PR|PR1 transmembrane protein 37 protein-coding chr2-5207 chr2 43426415 43426625 + 9.78 0.000 intron (NM_001083953, intron 28 of 37) intron (NM_001083953, intron 28 of 37) 169454 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding chr10-3920 chr10 78542559 78542769 + 9.78 0.000 Intergenic Intergenic 275322 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr14-2497 chr14 102696237 102696447 + 9.78 0.000 intron (NM_015156, intron 3 of 11) intron (NM_015156, intron 3 of 11) -81107 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr11-10208 chr11 97074156 97074366 + 9.78 0.000 Intergenic L1PA11|LINE|L1 565836 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr9-2693 chr9 79013976 79014186 + 9.78 0.000 Intergenic Intergenic 131585 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr6-4620 chr6 46389255 46389465 + 9.78 0.000 intron (NM_001251973, intron 2 of 4) L2c|LINE|L2 -63468 NM_005822 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr13-2683 chr13 87696478 87696688 + 9.78 0.000 Intergenic Intergenic 23968 NM_015567 26050 Hs.591208 NM_015567 ENSG00000165300 SLITRK5 LRRC11|bA364G4.2 SLIT and NTRK like family member 5 protein-coding chr3-10884 chr3 170228271 170228481 + 9.78 0.000 intron (NM_002740, intron 1 of 17) AluJb|SINE|Alu 5952 NM_002740 5584 Hs.478199 NM_002740 ENSG00000163558 PRKCI DXS1179E|PKCI|nPKC-iota protein kinase C iota protein-coding chr14-1987 chr14 51533254 51533464 + 9.78 0.000 intron (NM_001042481, intron 1 of 14) intron (NM_001042481, intron 1 of 14) 44231 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr20-3695 chr20 14595188 14595398 + 9.78 0.000 intron (NR_104193, intron 1 of 4) MER61A|LTR|ERV1 40909 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA chr2-6887 chr2 85994047 85994257 + 9.78 0.000 Intergenic Intergenic 104872 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr9-7660 chr9 68910384 68910594 + 9.78 0.000 intron (NM_003558, intron 8 of 15) intron (NM_003558, intron 8 of 15) 65352 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chr17-4330 chr17 1818529 1818739 + 9.78 0.000 intron (NM_052928, intron 2 of 10) L1MC4|LINE|L1 11268 NM_052928 114826 Hs.514602 NM_052928 ENSG00000186532 SMYD4 ZMYND21 SET and MYND domain containing 4 protein-coding chr8-1872 chr8 21908961 21909171 + 9.78 0.000 3' UTR (NM_003974, exon 5 of 5) 3' UTR (NM_003974, exon 5 of 5) 4624 NM_003974 9046 Hs.71215 NM_003974 ENSG00000147443 DOK2 p56DOK|p56dok-2 docking protein 2 protein-coding chr2-13674 chr2 163512732 163512942 + 9.78 0.000 Intergenic Intergenic 223171 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr5-3718 chr5 16994664 16994874 + 9.78 0.000 Intergenic Intergenic -58481 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr7-4370 chr7 70384850 70385060 + 9.78 0.000 intron (NM_015570, intron 4 of 18) intron (NM_015570, intron 4 of 18) -747189 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr16-2463 chr16 85918947 85919157 + 9.78 0.000 TTS (NR_106832) TTS (NR_106832) 705 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr5-3500 chr5 175828185 175828395 + 9.78 0.000 intron (NM_006650, intron 2 of 4) L3|LINE|CR1 31757 NM_006650 10814 Hs.193235 NM_006650 ENSG00000145920 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding chr5-6531 chr5 8032342 8032552 + 9.78 0.000 Intergenic L1MDa|LINE|L1 163299 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr3-4171 chr3 126571512 126571722 + 9.78 0.000 Intergenic Intergenic -12685 NM_152533 152065 Hs.178210 NM_152533 ENSG00000180697 C3orf22 - chromosome 3 open reading frame 22 protein-coding chr17-1997 chr17 78661641 78661851 + 9.78 0.000 Intergenic L1MC4|LINE|L1 -29689 NR_110849 101928710 Hs.464224 NR_110848 ENSG00000267123 SCAT1 LINC02081|XLOC_012582 S-phase cancer associated transcript 1 ncRNA chr12-1059 chr12 113153231 113153441 + 9.78 0.000 exon (NM_001144872, exon 4 of 8) exon (NM_001144872, exon 4 of 8) 3478 NM_001144872 387885 Hs.486856 NM_001144872 ENSG00000186710 CFAP73 CCDC42B|MIA2 cilia and flagella associated protein 73 protein-coding chr5-6612 chr5 37661743 37661953 + 9.78 0.000 intron (NM_001345998, intron 10 of 17) LTR8|LTR|ERV1 172974 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr2-4990 chr2 215652405 215652615 + 9.78 0.000 intron (NR_037195, intron 5 of 9) intron (NR_037195, intron 5 of 9) -65533 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr2-10730 chr2 30514224 30514434 + 9.78 0.000 intron (NM_001304445, intron 3 of 7) Tigger12A|DNA|TcMar-Tigger 67083 NM_001304445 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr15-1811 chr15 33021998 33022208 + 9.78 0.000 intron (NM_001277313, intron 6 of 20) MER2|DNA|TcMar-Tigger 46071 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr16-6025 chr16 9088277 9088487 + 9.78 0.000 Intergenic AluSz6|SINE|Alu -3262 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr5-3661 chr5 155360716 155360926 + 9.78 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 347066 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr11-8284 chr11 71545039 71545249 + 9.78 0.000 Intergenic MER4E|LTR|ERV1 -3276 NM_005553 3846 Hs.709220 NM_005553 ENSG00000254997 KRTAP5-9 KRN1|KRTAP5-1|KRTAP5.9 keratin associated protein 5-9 protein-coding chrX-4172 chrX 32688377 32688587 + 9.78 0.000 intron (NM_000109, intron 9 of 78) intron (NM_000109, intron 9 of 78) -46923 NR_031646 100302239 NR_031646 ENSG00000221348 MIR548F5 MIR548F-5|MIRN548F5|hsa-mir-548f-5 microRNA 548f-5 ncRNA chr9-2711 chr9 88304159 88304369 + 9.78 0.000 Intergenic MER21-int|LTR|ERVL -84180 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr8-2542 chr8 27740498 27740708 + 9.78 0.000 intron (NM_001304529, intron 5 of 6) L2a|LINE|L2 32037 NR_130762 55246 Hs.445512 NM_018246 ENSG00000147419 CCDC25 - coiled-coil domain containing 25 protein-coding chr13-743 chr13 113325333 113325543 + 9.78 0.000 3' UTR (NM_001286732, exon 7 of 7) 3' UTR (NM_001286732, exon 7 of 7) -26235 NR_046541 100874068 Hs.661837 NR_046541 GRTP1-AS1 - GRTP1 antisense RNA 1 ncRNA chr11-1969 chr11 9759894 9760104 + 9.78 0.000 promoter-TSS (NR_033972) promoter-TSS (NR_033972) -466 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chr2-5877 chr2 240601910 240602120 + 9.78 0.000 Intergenic Intergenic -3415 NM_001195382 2859 Hs.112218 NM_005301 ENSG00000178623 GPR35 - G protein-coupled receptor 35 protein-coding chr11-4734 chr11 73968573 73968783 + 9.78 0.000 intron (NM_153614, intron 6 of 7) intron (NM_153614, intron 6 of 7) 14166 NM_003355 7351 Hs.80658 NM_003355 ENSG00000175567 UCP2 BMIQ4|SLC25A8|UCPH uncoupling protein 2 protein-coding chr16-5988 chr16 5658432 5658642 + 9.78 0.000 Intergenic Intergenic 26070 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA chr7-1845 chr7 150421091 150421301 + 9.78 0.000 Intergenic Intergenic -12458 NR_034033 285972 Hs.647110 NR_034033 ENSG00000242258 LINC00996 - long intergenic non-protein coding RNA 996 ncRNA chr3-7961 chr3 168426316 168426526 + 9.78 0.000 intron (NR_021485, intron 3 of 15) MLT1B-int|LTR|ERVL-MaLR -125433 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chrX-4111 chrX 24842423 24842633 + 9.78 0.000 intron (NM_016937, intron 33 of 36) intron (NM_016937, intron 33 of 36) 98087 NR_003007 677773 Hs.689695 NR_003007 ENSG00000251869 SCARNA23 ACA12 small Cajal body-specific RNA 23 ncRNA chr2-3118 chr2 159157681 159157891 + 9.78 0.000 intron (NM_001350063, intron 6 of 24) intron (NM_001350063, intron 6 of 24) -29049 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr10-4630 chr10 122678833 122679043 + 9.78 0.000 exon (NM_001364461, exon 4 of 4) exon (NM_001364461, exon 4 of 4) 6056 NM_001364461 112577516 NM_001364461 LOC112577516 - carbohydrate-binding protein AQN-1-like protein-coding chr10-9122 chr10 127370762 127370972 + 9.78 0.000 intron (NM_001290223, intron 33 of 51) intron (NM_001290223, intron 33 of 51) -174276 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr14-5037 chr14 79761892 79762102 + 9.78 0.000 intron (NR_073547, intron 18 of 20) intron (NR_073547, intron 18 of 20) -449422 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chr2-4942 chr2 173985337 173985547 + 9.78 0.000 Intergenic Intergenic -19740 NM_001172712 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chrX-1711 chrX 20461752 20461962 + 9.78 0.000 Intergenic Intergenic -194948 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr1-15860 chr1 181723118 181723328 + 9.78 0.000 intron (NM_001205293, intron 16 of 47) intron (NM_001205293, intron 16 of 47) 239706 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr7-6672 chr7 148733446 148733656 + 9.78 0.000 intron (NM_001370660, intron 2 of 21) Kanga2_a|DNA|TcMar-Tc2 33841 NM_001370664 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr3-6666 chr3 129663052 129663262 + 9.78 0.000 intron (NM_015008, intron 2 of 3) intron (NM_015008, intron 2 of 3) 25575 NM_001349272 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr16-3593 chr16 73690818 73691028 + 9.78 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 304118 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr5-3189 chr5 78293994 78294204 + 9.78 0.000 intron (NM_003664, intron 1 of 26) intron (NM_003664, intron 1 of 26) 599 NM_001271769 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding chr14-3969 chr14 25911313 25911523 + 9.78 0.000 Intergenic Intergenic 642012 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr6-5698 chr6 124219227 124219437 + 9.78 0.000 intron (NM_001300737, intron 2 of 7) AluSz|SINE|Alu -63673 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr7-9129 chr7 108195787 108195997 + 9.78 0.000 intron (NM_001371137, intron 11 of 25) intron (NM_001371137, intron 11 of 25) 47493 NM_001371182 chr8-6082 chr8 26760336 26760546 + 9.78 0.000 intron (NM_001322502, intron 1 of 1) intron (NM_001322502, intron 1 of 1) 105214 NR_136343 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr2-2605 chr2 25252449 25252659 + 9.78 0.000 promoter-TSS (NM_153759) promoter-TSS (NM_153759) -239 NM_153759 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr2-4606 chr2 122146601 122146811 + 9.78 0.000 Intergenic Intergenic 391055 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr8-5605 chr8 94960639 94960849 + 9.78 0.000 intron (NM_001354534, intron 2 of 8) intron (NM_001354534, intron 2 of 8) 11184 NR_148907 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr6-3357 chr6 33860811 33861021 + 9.78 0.000 Intergenic Intergenic 35991 NR_038989 100507584 Hs.547104 NR_038989 ENSG00000249346 LINC01016 - long intergenic non-protein coding RNA 1016 ncRNA chr5-992 chr5 56014774 56014984 + 9.78 0.000 Intergenic SVA_D|Retroposon|SVA 19712 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA chr18-1272 chr18 58475695 58475905 + 9.78 0.000 Intergenic AluJb|SINE|Alu -24648 NR_039899 100616357 NR_039899 ENSG00000207778 MIR3591 - microRNA 3591 ncRNA chr13-1837 chr13 88718783 88718993 + 9.78 0.000 Intergenic MER2|DNA|TcMar-Tigger 92035 NR_047490 100861553 Hs.560132 NR_047490 ENSG00000261666 LINC00560 - long intergenic non-protein coding RNA 560 ncRNA chrX-1125 chrX 25206808 25207018 + 9.78 0.000 Intergenic Intergenic -190948 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr7-4107 chr7 43269528 43269738 + 9.78 0.000 intron (NM_001287059, intron 2 of 27) intron (NM_001287059, intron 2 of 27) 118738 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr15-2980 chr15 51348828 51349038 + 9.78 0.000 intron (NM_181789, intron 1 of 9) intron (NM_181789, intron 1 of 9) 7278 NM_181789 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr16-3940 chr16 85564077 85564287 + 9.78 0.000 Intergenic L2c|LINE|L2 -47227 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr18-914 chr18 61606921 61607131 + 9.78 0.000 Intergenic Intergenic -141150 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr9-4087 chr9 126895744 126895954 + 9.78 0.000 Intergenic AluSx1|SINE|Alu -18925 NM_001190729 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr3-5569 chr3 5528087 5528297 + 9.78 0.000 Intergenic L1PA7|LINE|L1 -277937 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr15-3466 chr15 94225711 94225921 + 9.78 0.000 Intergenic Intergenic -72385 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr5-7219 chr5 8710545 8710755 + 9.78 0.000 Intergenic Intergenic -129082 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr22-1206 chr22 27094698 27094908 + 9.78 0.000 Intergenic Intergenic -34285 NM_001318329 284898 Hs.350813 NM_001318329 LOC284898 - uncharacterized LOC284898 protein-coding chr16-5522 chr16 23952123 23952333 + 9.78 0.000 intron (NM_002738, intron 2 of 16) intron (NM_002738, intron 2 of 16) 116245 NM_002738 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr7-5864 chr7 90824385 90824595 + 9.78 0.000 intron (NM_012395, intron 4 of 13) intron (NM_012395, intron 4 of 13) 114674 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr3-9201 chr3 37020757 37020967 + 9.78 0.000 intron (NM_001167617, intron 11 of 18) MIRb|SINE|MIR 27512 NM_001354626 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding chr1-4135 chr1 2347165 2347375 + 9.78 0.000 intron (NM_024848, intron 10 of 13) intron (NM_024848, intron 10 of 13) 5391 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr6-3275 chr6 154515939 154516149 + 9.78 0.000 Intergenic Intergenic -5359 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr7-6449 chr7 1394933 1395143 + 9.78 0.000 Intergenic Intergenic 64432 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr5-1082 chr5 35924409 35924619 + 9.78 0.000 intron (NM_144647, intron 1 of 4) intron (NM_144647, intron 1 of 4) 14108 NM_001042625 133690 Hs.55150 NM_144647 ENSG00000152611 CAPSL - calcyphosine like protein-coding chr9-3080 chr9 16192644 16192854 + 9.78 0.000 Intergenic Intergenic 60358 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr20-1550 chr20 62328300 62328510 + 9.78 0.000 exon (NM_005560, exon 35 of 80) exon (NM_005560, exon 35 of 80) 4152 NR_039915 100616340 NR_039915 ENSG00000284074 MIR4758 - microRNA 4758 ncRNA chr11-3570 chr11 47239924 47240134 + 9.78 0.000 TTS (NM_000107) TTS (NM_000107) -8271 NM_001251935 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr2-7492 chr2 17830724 17830934 + 9.78 0.000 Intergenic Intergenic 14369 NM_001105569 343930 NM_001105569 ENSG00000151379 MSGN1 MSOG|pMsgn1 mesogenin 1 protein-coding chr11-5872 chr11 10926832 10927042 + 9.78 0.000 Intergenic MamGypsy2-I|LTR|Gypsy 68720 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr3-8378 chr3 93798039 93798249 + 9.78 0.000 Intergenic ALR/Alpha|Satellite|centr 175937 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr11-5010 chr11 76130498 76130708 + 9.78 0.000 intron (NM_003369, intron 14 of 14) intron (NM_003369, intron 14 of 14) 75899 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr6-6172 chr6 5229908 5230118 + 9.78 0.000 intron (NM_020408, intron 1 of 2) intron (NM_020408, intron 1 of 2) 30937 NR_134856 57128 Hs.387755 NM_020408 ENSG00000214113 LYRM4 C6orf149|CGI-203|COXPD19|ISD11 LYR motif containing 4 protein-coding chr8-3001 chr8 109123820 109124030 + 9.78 0.000 Intergenic MER44B|DNA|TcMar-Tigger 37297 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chrX-5455 chrX 154482571 154482781 + 9.78 0.000 Intergenic L2|LINE|L2 -3419 NM_006014 8270 Hs.444619 NM_006014 ENSG00000196976 LAGE3 CVG5|DXS9879E|DXS9951E|ESO3|GAMOS2|ITBA2|Pcc1 L antigen family member 3 protein-coding chr2-8936 chr2 186079560 186079770 + 9.78 0.000 intron (NR_110218, intron 3 of 5) intron (NR_110218, intron 3 of 5) 6652 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr1-9684 chr1 51145141 51145351 + 9.78 0.000 intron (NM_001136508, intron 3 of 4) AluJo|SINE|Alu 43018 NM_001136508 284546 Hs.176177 NM_001136508 ENSG00000204006 C1orf185 - chromosome 1 open reading frame 185 protein-coding chrX-1386 chrX 153832117 153832327 + 9.78 0.000 Intergenic ERVL-E-int|LTR|ERVL -1335 NM_001303513 57595 Hs.92732 NM_032512 ENSG00000067840 PDZD4 LNX5|LU1|PDZK4|PDZRN4L PDZ domain containing 4 protein-coding chr15-1256 chr15 80070937 80071147 + 9.78 0.000 intron (NM_001242914, intron 1 of 6) intron (NM_001242914, intron 1 of 6) -1519 NM_001242916 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr11-2736 chr11 22829341 22829551 + 9.78 0.000 promoter-TSS (NR_135213) promoter-TSS (NR_135213) -67 NR_135213 258010 Hs.349096 NM_148893 ENSG00000198168 SVIP - small VCP interacting protein protein-coding chr3-8534 chr3 142259741 142259951 + 9.78 0.000 Intergenic MER51B|LTR|ERV1 -34261 NM_001039547 256356 Hs.135904 NM_152776 ENSG00000175066 GK5 - glycerol kinase 5 protein-coding chr11-5320 chr11 50107724 50107934 + 9.78 0.000 Intergenic Intergenic 74955 NM_001005513 403257 Hs.554533 NM_001005513 ENSG00000260811 OR4C45 - olfactory receptor family 4 subfamily C member 45 (gene/pseudogene) protein-coding chr1-8203 chr1 23640345 23640555 + 9.78 0.000 exon (NM_001348075, exon 7 of 7) exon (NM_001348075, exon 7 of 7) 13116 NM_001348075 259283 Hs.523369 NM_001348075 MDS2 - myelodysplastic syndrome 2 translocation associated protein-coding chr2-5670 chr2 201254317 201254527 + 9.78 0.000 intron (NM_033355, intron 2 of 9) intron (NM_033355, intron 2 of 9) -3613 NR_111983 841 Hs.599762 NM_001228 ENSG00000064012 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8 protein-coding chr9-2488 chr9 90642790 90643000 + 9.78 0.000 promoter-TSS (NM_017594) promoter-TSS (NM_017594) -71 NM_017594 54769 Hs.165636 NM_017594 ENSG00000165023 DIRAS2 Di-Ras2 DIRAS family GTPase 2 protein-coding chr9-7106 chr9 130128230 130128440 + 9.78 0.000 intron (NM_020960, intron 16 of 17) intron (NM_020960, intron 16 of 17) 15884 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr4-4585 chr4 76000373 76000583 + 9.78 0.000 TTS (NM_002416) TTS (NM_002416) 7031 NM_002416 4283 Hs.77367 NM_002416 ENSG00000138755 CXCL9 CMK|Humig|MIG|SCYB9|crg-10 C-X-C motif chemokine ligand 9 protein-coding chr5-4586 chr5 27671392 27671602 + 9.78 0.000 Intergenic Intergenic 199205 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chrX-3993 chrX 15377106 15377316 + 9.78 0.000 intron (NR_037859, intron 9 of 14) L2a|LINE|L2 7202 NM_004469 2277 Hs.11392 NM_004469 ENSG00000165197 VEGFD FIGF|VEGF-D vascular endothelial growth factor D protein-coding chr7-4988 chr7 155212431 155212641 + 9.78 0.000 Intergenic Intergenic -85236 NM_001346590 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr11-5688 chr11 251743 251953 + 9.78 0.000 exon (NM_175932, exon 10 of 11) exon (NM_175932, exon 10 of 11) 14872 NM_002817 5719 Hs.134688 NM_002817 ENSG00000185627 PSMD13 HSPC027|Rpn9|S11|p40.5 proteasome 26S subunit, non-ATPase 13 protein-coding chr7-9568 chr7 143271906 143272116 + 9.78 0.000 intron (NR_133932, intron 2 of 2) L1MD2|LINE|L1 8570 NM_015917 373156 Hs.390667 NM_015917 ENSG00000197448 GSTK1 GST|GST 13-13|GST13|GST13-13|GSTK1-1|hGSTK1 glutathione S-transferase kappa 1 protein-coding chr2-12090 chr2 33363781 33363991 + 9.78 0.000 intron (NM_206943, intron 29 of 33) intron (NM_206943, intron 29 of 33) -54630 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr10-7647 chr10 25078876 25079086 + 9.78 0.000 Intergenic Intergenic -16702 NM_001270383 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr3-8470 chr3 124786890 124787100 + 9.78 0.000 intron (NM_001354766, intron 9 of 13) intron (NM_001354766, intron 9 of 13) 54556 NR_036088 100422864 NR_036088 ENSG00000265981 MIR544B - microRNA 544b ncRNA chr16-2068 chr16 83961611 83961821 + 9.78 0.000 intron (NM_182981, intron 5 of 5) MIR3|SINE|MIR -6916 NM_019065 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr11-4041 chr11 11895879 11896089 + 9.78 0.000 intron (NM_001282659, intron 4 of 27) Charlie23a|DNA|hAT-Charlie 54561 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr1-5215 chr1 184490106 184490316 + 9.78 0.000 intron (NM_030806, intron 2 of 5) L2b|LINE|L2 103182 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr2-4312 chr2 235974117 235974327 + 9.78 0.000 intron (NM_001037131, intron 13 of 17) MIRb|SINE|MIR 194164 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr9-4652 chr9 114706246 114706456 + 9.78 0.000 Intergenic Intergenic -24262 NR_144867 100505478 Hs.200101 NM_001199233 ENSG00000230601 TEX48 - testis expressed 48 protein-coding chr1-3167 chr1 86154763 86154973 + 9.78 0.000 intron (NM_152890, intron 1 of 59) intron (NM_152890, intron 1 of 59) 1603 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr3-5624 chr3 9994222 9994432 + 9.78 0.000 intron (NR_103821, intron 2 of 2) intron (NR_103821, intron 2 of 2) 7434 NR_103821 442075 Hs.690469 NM_001013730 EMC3-AS1 - EMC3 antisense RNA 1 ncRNA chr1-4263 chr1 1280778 1280988 + 9.78 0.000 intron (NM_001130413, intron 1 of 17) intron (NM_001130413, intron 1 of 17) 447 NR_037668 6339 Hs.512681 NM_002978 ENSG00000162572 SCNN1D ENaCd|ENaCdelta|SCNED|dNaCh sodium channel epithelial 1 delta subunit protein-coding chr4-7568 chr4 78910690 78910900 + 9.78 0.000 exon (NM_198892, exon 16 of 16) exon (NM_198892, exon 16 of 16) 28643 NM_001040202 152559 Hs.657312 NM_177453 ENSG00000163291 PAQR3 RKTG progestin and adipoQ receptor family member 3 protein-coding chr2-4143 chr2 171936116 171936326 + 9.78 0.000 intron (NR_027862, intron 2 of 9) L2|LINE|L2 13760 NM_003642 8520 Hs.632532 NM_003642 ENSG00000128708 HAT1 KAT1 histone acetyltransferase 1 protein-coding chr7-6029 chr7 108349022 108349232 + 9.78 0.000 intron (NM_001371131, intron 2 of 33) intron (NM_001371131, intron 2 of 33) -20601 NM_001371178 chr2-13888 chr2 180260972 180261182 + 9.78 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -253780 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr5-3754 chr5 53815074 53815284 + 9.78 0.000 intron (NR_147168, intron 1 of 3) L1M6|LINE|L1 4503 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr8-3059 chr8 15645641 15645851 + 9.78 0.000 intron (NM_001356429, intron 2 of 10) intron (NM_001356429, intron 2 of 10) 105483 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr3-3555 chr3 49181334 49181544 + 9.78 0.000 intron (NM_001080528, intron 2 of 3) AluJo|SINE|Alu 9841 NM_173546 200942 Hs.13781 NM_173546 ENSG00000185909 KLHDC8B CHL kelch domain containing 8B protein-coding chr1-12181 chr1 192573061 192573271 + 9.78 0.000 Intergenic L1MC1|LINE|L1 -2607 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G protein signaling 1 protein-coding chr9-7645 chr9 43042373 43042583 + 9.78 0.000 Intergenic Intergenic -83688 NR_160669 102724904 NR_160669 LOC102724904 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like pseudogene pseudo chr1-4451 chr1 2076211 2076421 + 9.78 0.000 intron (NM_001242874, intron 1 of 14) intron (NM_001242874, intron 1 of 14) 2330 NM_001350805 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chrX-3052 chrX 103773615 103773825 + 9.78 0.000 Intergenic Intergenic -2786 NM_001128834 5354 Hs.1787 NM_000533 ENSG00000123560 PLP1 GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2 proteolipid protein 1 protein-coding chr7-4983 chr7 152757155 152757365 + 9.78 0.000 Intergenic L2c|LINE|L2 -2489 NR_146950 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr8-2285 chr8 118052458 118052668 + 9.78 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 59256 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr14-1602 chr14 97488403 97488613 + 9.78 0.000 intron (NR_110166, intron 1 of 4) intron (NR_110166, intron 1 of 4) 29692 NR_110166 101929241 Hs.650839 NR_110165 ENSG00000246084 LINC02325 - long intergenic non-protein coding RNA 2325 ncRNA chr11-5511 chr11 85661996 85662206 + 9.78 0.000 non-coding (NR_028024, exon 2 of 2) non-coding (NR_028024, exon 2 of 2) 3028 NR_028027 58487 Hs.535319 NM_021212 ENSG00000137504 CREBZF SMILE|ZF CREB/ATF bZIP transcription factor protein-coding chr10-2167 chr10 124324452 124324662 + 9.78 0.000 Intergenic Intergenic 94366 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr22-793 chr22 50063791 50064001 + 9.78 0.000 intron (NM_015166, intron 11 of 11) intron (NM_015166, intron 11 of 11) -5669 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr1-5943 chr1 25218084 25218294 + 9.78 0.000 Intergenic Intergenic 14313 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr2-7170 chr2 204007157 204007367 + 9.78 0.000 Intergenic Intergenic 70514 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr10-7183 chr10 107517080 107517290 + 9.78 0.000 Intergenic MER44C|DNA|TcMar-Tigger -352479 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr9-8098 chr9 98702725 98702935 + 9.78 0.000 intron (NM_005458, intron 1 of 18) intron (NM_005458, intron 1 of 18) 6105 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr4-7619 chr4 82606325 82606535 + 9.78 0.000 Intergenic MamGypLTR3a|LTR|Gypsy 15007 NR_024087 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr5-971 chr5 173513630 173513840 + 9.78 0.000 Intergenic L2a|LINE|L2 -65899 NR_027109 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr2-4519 chr2 32883225 32883435 + 9.78 0.000 intron (NR_027099, intron 7 of 10) intron (NR_027099, intron 7 of 10) -43797 NR_027097 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr2-3157 chr2 196481313 196481523 + 9.78 0.000 intron (NM_001348768, intron 1 of 28) intron (NM_001348768, intron 1 of 28) 111565 NM_020760 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr1-12158 chr1 179621969 179622179 + 9.78 0.000 intron (NM_001199091, intron 6 of 16) MIR|SINE|MIR 15847 NM_001199092 163589 Hs.197354 NM_173533 ENSG00000162782 TDRD5 TUDOR3 tudor domain containing 5 protein-coding chr1-10705 chr1 192408921 192409131 + 9.78 0.000 Intergenic Intergenic 92034 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr9-4573 chr9 90641425 90641635 + 9.78 0.000 intron (NM_017594, intron 1 of 1) intron (NM_017594, intron 1 of 1) 1294 NM_017594 54769 Hs.165636 NM_017594 ENSG00000165023 DIRAS2 Di-Ras2 DIRAS family GTPase 2 protein-coding chr11-2450 chr11 43920791 43921001 + 9.78 0.000 promoter-TSS (NR_038907) promoter-TSS (NR_038907) 48 NR_038907 100507300 Hs.664588 NR_038907 ENSG00000244926 ALKBH3-AS1 - ALKBH3 antisense RNA 1 ncRNA chr11-5219 chr11 16303301 16303511 + 9.78 0.000 intron (NM_033326, intron 3 of 15) L1MD|LINE|L1 53140 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr21-422 chr21 17512464 17512674 + 9.78 0.000 promoter-TSS (NM_001338) promoter-TSS (NM_001338) -337 NM_001207066 1525 Hs.627078 NM_001338 ENSG00000154639 CXADR CAR|CAR4/6|HCAR CXADR Ig-like cell adhesion molecule protein-coding chr4-7183 chr4 40754664 40754874 + 9.78 0.000 intron (NM_024677, intron 2 of 11) intron (NM_024677, intron 2 of 11) 4814 NM_024677 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr6-7514 chr6 65087448 65087658 + 9.78 0.000 intron (NM_001292009, intron 12 of 43) intron (NM_001292009, intron 12 of 43) -213865 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr3-8742 chr3 197345070 197345280 + 9.78 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -45854 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr2-14535 chr2 229726054 229726264 + 9.78 0.000 Intergenic Intergenic -11604 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr14-4123 chr14 71705524 71705734 + 9.78 0.000 intron (NM_001354286, intron 17 of 24) intron (NM_001354286, intron 17 of 24) 119331 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr15-746 chr15 43872501 43872711 + 9.78 0.000 non-coding (NR_104455, exon 15 of 15) non-coding (NR_104455, exon 15 of 15) 5565 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr13-814 chr13 25114306 25114516 + 9.78 0.000 Intergenic Intergenic 18273 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr2-11133 chr2 137506457 137506667 + 9.78 0.000 intron (NM_001316349, intron 15 of 27) intron (NM_001316349, intron 15 of 27) 421370 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr3-6310 chr3 76334374 76334584 + 9.78 0.000 Intergenic Intergenic -548930 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr9-3275 chr9 33765500 33765710 + 9.78 0.000 intron (NM_001197098, intron 1 of 4) MER44C|DNA|TcMar-Tigger 14784 NM_001197098 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr5-2748 chr5 139746885 139747095 + 9.78 0.000 promoter-TSS (NR_105052) promoter-TSS (NR_105052) -767 NR_105052 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr8-7323 chr8 133584260 133584470 + 9.78 0.000 Intergenic Intergenic -12478 NM_003033 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr12-1625 chr12 106245404 106245614 + 9.78 0.000 intron (NM_006825, intron 1 of 1) intron (NM_006825, intron 1 of 1) 2511 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr14-2645 chr14 68565448 68565658 + 9.78 0.000 intron (NM_001321818, intron 10 of 10) L3|LINE|CR1 63234 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr15-2016 chr15 47803679 47803889 + 9.78 0.000 intron (NR_120336, intron 4 of 4) MIRb|SINE|MIR 42452 NR_120336 101928442 Hs.242804 NR_120336 ENSG00000259572 LINC01491 - long intergenic non-protein coding RNA 1491 ncRNA chr2-3627 chr2 121648530 121648740 + 9.78 0.000 intron (NM_015282, intron 1 of 38) intron (NM_015282, intron 1 of 38) 827 NM_001142274 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding chr2-2182 chr2 26970687 26970897 + 9.78 0.000 5' UTR (NM_012326, exon 1 of 7) 5' UTR (NM_012326, exon 1 of 7) 155 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr20-2787 chr20 55214253 55214463 + 9.78 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -208685 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA chrX-3307 chrX 115649736 115649946 + 9.78 0.000 3' UTR (NM_005032, exon 16 of 16) 3' UTR (NM_005032, exon 16 of 16) 56290 NM_001172335 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr8-6392 chr8 55275330 55275540 + 9.78 0.000 intron (NM_052898, intron 1 of 2) intron (NM_052898, intron 1 of 2) 173407 NM_052898 114786 Hs.130197 NM_052898 ENSG00000206579 XKR4 XRG4 XK related 4 protein-coding chr21-504 chr21 31901388 31901598 + 9.78 0.000 intron (NM_014586, intron 1 of 10) intron (NM_014586, intron 1 of 10) 28473 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr12-7404 chr12 57728351 57728561 + 9.78 0.000 TTS (NR_027032) TTS (NR_027032) 2216 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA chr1-6923 chr1 151720523 151720733 + 9.78 0.000 promoter-TSS (NM_001144956) promoter-TSS (NM_001144956) -894 NM_001144956 284485 Hs.297967 NM_001144956 ENSG00000178796 RIIAD1 C1orf230|NCRNA00166 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 protein-coding chr6-7286 chr6 43545170 43545380 + 9.78 0.000 intron (NR_144392, intron 21 of 32) intron (NR_144392, intron 21 of 32) 28186 NM_001363658 9533 Hs.743509 NM_004875 ENSG00000171453 POLR1C AC40|HLD11|RPA39|RPA40|RPA5|RPAC1|RPC40|TCS3 RNA polymerase I and III subunit C protein-coding chr21-1684 chr21 28634427 28634637 + 9.78 0.000 Intergenic Intergenic 95214 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr10-6056 chr10 128184660 128184870 + 9.78 0.000 Intergenic L1MB4|LINE|L1 -58342 NM_002417 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chr9-3610 chr9 87386914 87387124 + 9.78 0.000 Intergenic Intergenic -110209 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr5-1637 chr5 142674634 142674844 + 9.78 0.000 intron (NM_001144935, intron 1 of 3) intron (NM_001144935, intron 1 of 3) 10941 NM_001354956 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr15-1620 chr15 85473581 85473791 + 9.78 0.000 intron (NM_007200, intron 1 of 36) intron (NM_007200, intron 1 of 36) 93083 NM_007200 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr11-9961 chr11 76898052 76898262 + 9.78 0.000 intron (NM_001300953, intron 1 of 9) Charlie1a|DNA|hAT-Charlie 37239 NM_001300954 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr3-3690 chr3 160218858 160219068 + 9.78 0.000 Intergenic Intergenic -6673 NM_001168214 401097 Hs.729755 NM_001168214 ENSG00000180044 C3orf80 - chromosome 3 open reading frame 80 protein-coding chr18-961 chr18 36512265 36512475 + 9.78 0.000 intron (NM_001281740, intron 4 of 28) intron (NM_001281740, intron 4 of 28) 151048 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chrX-2516 chrX 95829361 95829571 + 9.78 0.000 Intergenic L1P4|LINE|L1 508436 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr1-11099 chr1 229621889 229622099 + 9.78 0.000 intron (NM_001025247, intron 1 of 3) Kanga2_a|DNA|TcMar-Tc2 4053 NM_014409 27097 Hs.270621 NM_014409 ENSG00000135801 TAF5L PAF65B TATA-box binding protein associated factor 5 like protein-coding chr3-5923 chr3 42667882 42668092 + 9.78 0.000 TTS (NM_145166) TTS (NM_145166) -13599 NR_125400 101928323 NR_125400 LOC101928323 - uncharacterized LOC101928323 ncRNA chr2-7098 chr2 174800680 174800890 + 9.78 0.000 intron (NM_001025201, intron 12 of 12) intron (NM_001025201, intron 12 of 12) -36313 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr6-2409 chr6 152378468 152378678 + 9.78 0.000 intron (NM_182961, intron 56 of 145) intron (NM_182961, intron 56 of 145) -1957 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr16-3166 chr16 81365453 81365663 + 9.78 0.000 intron (NM_022041, intron 9 of 10) intron (NM_022041, intron 9 of 10) -19460 NR_039871 100616150 NR_039871 ENSG00000284473 MIR4720 - microRNA 4720 ncRNA chr11-2349 chr11 94303425 94303635 + 9.78 0.000 Intergenic Intergenic -2107 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr12-4237 chr12 111237541 111237751 + 9.78 0.000 intron (NM_015267, intron 3 of 21) L2b|LINE|L2 -66496 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr10-3537 chr10 74766551 74766761 + 9.78 0.000 Intergenic Intergenic -58599 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr1-7373 chr1 23602757 23602967 + 9.78 0.000 Intergenic MIR3|SINE|MIR -24472 NM_001348075 259283 Hs.523369 NM_001348075 MDS2 - myelodysplastic syndrome 2 translocation associated protein-coding chr15-3967 chr15 43898797 43899007 + 9.78 0.000 intron (NM_032892, intron 7 of 13) intron (NM_032892, intron 7 of 13) -20731 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr16-2475 chr16 87747696 87747906 + 9.78 0.000 intron (NM_001351938, intron 4 of 10) intron (NM_001351938, intron 4 of 10) 18185 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr17-4830 chr17 58301810 58302020 + 9.78 0.000 3' UTR (NM_001261835, exon 32 of 32) 3' UTR (NM_001261835, exon 32 of 32) -20980 NM_000250 4353 Hs.458272 NM_000250 ENSG00000005381 MPO - myeloperoxidase protein-coding chr11-8050 chr11 24717228 24717438 + 9.78 0.000 intron (NM_001252008, intron 1 of 11) L1PA14|LINE|L1 220280 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr4-8682 chr4 180596198 180596408 + 9.78 0.000 Intergenic Intergenic 562846 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr17-4512 chr17 74961686 74961896 + 9.78 0.000 intron (NM_030630, intron 6 of 18) intron (NM_030630, intron 6 of 18) -8898 NR_110878 102723641 NR_110878 ENSG00000263586 HID1-AS1 - HID1 antisense RNA 1 ncRNA chr6-4242 chr6 6632332 6632542 + 9.78 0.000 intron (NM_004271, intron 3 of 4) intron (NM_004271, intron 3 of 4) -9611 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr16-3104 chr16 68016597 68016807 + 9.78 0.000 promoter-TSS (NM_001282442) promoter-TSS (NM_001282442) -791 NM_001282442 100131303 Hs.655900 NM_001282442 ENSG00000263201 DPEP2NB - DPEP2 neighbor protein-coding chr8-4870 chr8 57653198 57653408 + 9.78 0.000 Intergenic Intergenic -92846 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr22-1473 chr22 17830196 17830406 + 9.78 0.000 intron (NM_015241, intron 21 of 31) intron (NM_015241, intron 21 of 31) 53011 NR_103718 200298 Hs.517397 NR_103718 ENSG00000269220 LINC00528 C22orf37 long intergenic non-protein coding RNA 528 ncRNA chr20-4491 chr20 63032215 63032425 + 9.78 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 4708 NR_028295 100144596 Hs.187773 NM_022099 LINC00029 C20orf51|NCRNA00029 long intergenic non-protein coding RNA 29 ncRNA chr7-4290 chr7 18213897 18214107 + 9.78 0.000 intron (NM_001321872, intron 2 of 11) intron (NM_001321872, intron 2 of 11) -76090 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr5-2849 chr5 68344445 68344655 + 9.78 0.000 Intergenic Intergenic 51973 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr8-2960 chr8 55633077 55633287 + 9.78 0.000 Intergenic MIRb|SINE|MIR -112204 NR_134323 105375843 Hs.662416 NR_134323 ENSG00000254357 LOC105375843 - uncharacterized LOC105375843 ncRNA chr11-8896 chr11 15816662 15816872 + 9.78 0.000 Intergenic Intergenic 152854 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr1-4546 chr1 60862625 60862835 + 9.78 0.000 Intergenic Intergenic -37146 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr20-918 chr20 1357959 1358169 + 9.78 0.000 intron (NR_040047, intron 1 of 2) L1MDa|LINE|L1 -28925 NM_080489 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2|ST2 syndecan binding protein 2 protein-coding chr14-1407 chr14 59428822 59429032 + 9.78 0.000 Intergenic Intergenic 36453 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding chr17-4721 chr17 32585012 32585222 + 9.78 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 98124 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr12-2649 chr12 3129824 3130034 + 9.78 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 52550 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr13-2865 chr13 110516321 110516531 + 9.78 0.000 Intergenic L1MC4a|LINE|L1 -8247 NR_046583 100874203 Hs.508716 NR_046583 ENSG00000232814 COL4A2-AS1 - COL4A2 antisense RNA 1 ncRNA chr3-3164 chr3 173662002 173662212 + 9.78 0.000 intron (NM_001365928, intron 3 of 6) intron (NM_001365928, intron 3 of 6) 77673 NM_001365934 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr7-2054 chr7 122268645 122268855 + 9.78 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -34908 NR_036484 154860 Hs.664204 NR_036484 ENSG00000230316 FEZF1-AS1 - FEZF1 antisense RNA 1 ncRNA chr13-1161 chr13 34817428 34817638 + 9.78 0.000 Intergenic Intergenic -124754 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr4-7243 chr4 46191130 46191340 + 9.78 0.000 Intergenic MIRb|SINE|MIR -67181 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr7-5483 chr7 42170824 42171034 + 9.78 0.000 intron (NM_000168, intron 2 of 14) intron (NM_000168, intron 2 of 14) 66280 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr1-6343 chr1 6109070 6109280 + 9.78 0.000 intron (NM_015557, intron 38 of 41) intron (NM_015557, intron 38 of 41) 63287 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr16-2001 chr16 1012658 1012868 + 9.78 0.000 Intergenic Intergenic 30993 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr17-7922 chr17 44482350 44482560 + 9.78 0.000 intron (NM_001002909, intron 1 of 7) AluSx1|SINE|Alu 20951 NM_001304942 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr6-6628 chr6 151265901 151266111 + 9.78 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 26039 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr5-3459 chr5 163572059 163572269 + 9.78 0.000 Intergenic Intergenic 66545 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr5-4056 chr5 50718718 50718928 + 9.78 0.000 intron (NM_024615, intron 2 of 25) L1MA4|LINE|L1 51409 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr8-4489 chr8 118702647 118702857 + 9.78 0.000 intron (NR_038210, intron 3 of 4) LTR16A|LTR|ERVL -80789 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr15-2027 chr15 50003899 50004109 + 9.78 0.000 intron (NR_073597, intron 7 of 26) intron (NR_073597, intron 7 of 26) 109375 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr5-2251 chr5 15285905 15286115 + 9.78 0.000 Intergenic LTR91|LTR|ERVL -19450 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr2-4729 chr2 240670417 240670627 + 9.78 0.000 Intergenic MER4D0|LTR|ERV1 12363 NM_001102467 653437 Hs.437167 NM_001102467 ENSG00000185176 AQP12B INSSA3 aquaporin 12B protein-coding chr1-6000 chr1 49230424 49230634 + 9.78 0.000 intron (NM_001323575, intron 4 of 12) intron (NM_001323575, intron 4 of 12) -26882 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr1-7227 chr1 224266987 224267197 + 9.78 0.000 intron (NM_002533, intron 18 of 22) MER21B|LTR|ERVL -9982 NR_031574 100313769 NR_031574 ENSG00000221406 MIR320B2 MIR320B-2|MIRN320B2|mir-320b-2 microRNA 320b-2 ncRNA chr1-13830 chr1 19599836 19600046 + 9.78 0.000 intron (NM_001204089, intron 1 of 3) intron (NM_001204089, intron 1 of 3) 2962 NM_001204088 100532736 Hs.654502 NM_001204088 ENSG00000158747 MICOS10-NBL1 C1orf151-NBL1|DAN|DAND1|MINOS1-NBL1|NBL1 MICOS10-NBL1 readthrough protein-coding chr22-3329 chr22 21865265 21865475 + 9.78 0.000 intron (NM_002745, intron 1 of 8) intron (NM_002745, intron 1 of 8) 2310 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr22-4011 chr22 39728988 39729198 + 9.78 0.000 Intergenic MIRb|SINE|MIR 158340 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr1-7175 chr1 208809998 208810208 + 9.78 0.000 Intergenic MER5A|DNA|hAT-Charlie 81415 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr5-2490 chr5 149387034 149387244 + 9.78 0.000 intron (NM_001317987, intron 1 of 2) intron (NM_001317987, intron 1 of 2) -7847 NM_014443 27190 Hs.156979 NM_014443 ENSG00000127743 IL17B IL-17B|IL-20|NIRF|ZCYTO7 interleukin 17B protein-coding chr17-3814 chr17 41756853 41757063 + 9.78 0.000 intron (NM_001352776, intron 13 of 15) intron (NM_001352776, intron 13 of 15) -22312 NM_177977 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding chr15-1702 chr15 69650052 69650262 + 9.78 0.000 intron (NR_126437, intron 3 of 5) L2c|LINE|L2 57957 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr3-7031 chr3 172530466 172530676 + 9.78 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -7141 NM_001190943 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL TNF superfamily member 10 protein-coding chr15-4939 chr15 78092363 78092573 + 9.78 0.000 promoter-TSS (NM_001101404) promoter-TSS (NM_001101404) -117 NM_001101404 646892 Hs.569511 NM_001101404 ENSG00000183476 SH2D7 - SH2 domain containing 7 protein-coding chr19-3161 chr19 38209627 38209837 + 9.78 0.000 Intergenic CpG 14518 NM_001289978 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr7-985 chr7 73005594 73005804 + 9.78 0.000 promoter-TSS (NR_130940) promoter-TSS (NR_130940) 244 NR_040582 442578 Hs.632310 NM_001013739 STAG3L3 STAG3L1|STAG3L2|STAG3L3P stromal antigen 3-like 3 (pseudogene) pseudo chr3-5890 chr3 38113128 38113338 + 9.78 0.000 intron (NM_007335, intron 25 of 36) L1ME3G|LINE|L1 23894 NM_001607 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr2-3991 chr2 85935710 85935920 + 9.78 0.000 Intergenic LTR49-int|LTR|ERV1 46535 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr9-3207 chr9 133575491 133575701 + 9.78 0.000 TTS (NM_014694) TTS (NM_014694) 4650 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chrX-1414 chrX 23980232 23980442 + 9.78 0.000 Intergenic L1M4a2|LINE|L1 46849 NM_030624 80311 Hs.495854 NM_030624 ENSG00000174010 KLHL15 HEL-S-305 kelch like family member 15 protein-coding chr22-1296 chr22 41410421 41410631 + 9.78 0.000 Intergenic Intergenic 28584 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr21-1950 chr21 45894351 45894561 + 9.78 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 44495 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr2-2681 chr2 241536113 241536323 + 9.78 0.000 Intergenic MER54A|LTR|ERVL -22527 NM_032515 666 Hs.293753 NM_032515 ENSG00000176720 BOK BCL2L9|BOKL BCL2 family apoptosis regulator BOK protein-coding chr2-10311 chr2 144290297 144290507 + 9.78 0.000 intron (NM_001354354, intron 1 of 12) L2a|LINE|L2 4091 NM_001006636 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr4-5250 chr4 169967947 169968157 + 9.78 0.000 intron (NR_037878, intron 1 of 4) L1MA5A|LINE|L1 7850 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr2-6783 chr2 46467898 46468108 + 9.78 0.000 Intergenic Intergenic -11562 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding chr1-5278 chr1 208243190 208243400 + 9.78 0.000 intron (NM_025179, intron 1 of 31) CpG 1089 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr1-9452 chr1 34794249 34794459 + 9.78 0.000 exon (NM_002060, exon 2 of 2) exon (NM_002060, exon 2 of 2) 1355 NM_002060 2701 Hs.296310 NM_002060 ENSG00000187513 GJA4 CX37 gap junction protein alpha 4 protein-coding chr16-3324 chr16 1853552 1853762 + 9.78 0.000 intron (NM_001163560, intron 7 of 13) intron (NM_001163560, intron 7 of 13) 18507 NM_001163560 254528 Hs.729604 NM_152764 ENSG00000162039 MEIOB C16orf73|SPGF22|gs129 meiosis specific with OB-fold protein-coding chr4-7492 chr4 73119421 73119631 + 9.78 0.000 intron (NM_032217, intron 21 of 33) intron (NM_032217, intron 21 of 33) -49767 NM_001300729 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding chr10-5067 chr10 43383367 43383577 + 9.78 0.000 Intergenic Intergenic 11828 NM_001184963 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr10-3959 chr10 108181396 108181606 + 9.78 0.000 Intergenic Intergenic -112208 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr10-1829 chr10 13882371 13882581 + 9.78 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 89420 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr14-3727 chr14 29058254 29058464 + 9.78 0.000 Intergenic Intergenic -272572 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr15-2423 chr15 70172756 70172966 + 9.78 0.000 Intergenic Intergenic -74944 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr19-1662 chr19 49835660 49835870 + 9.78 0.000 exon (NM_030973, exon 16 of 18) exon (NM_030973, exon 16 of 18) 3747 NR_106858 102465480 NR_106858 ENSG00000284114 MIR6800 hsa-mir-6800 microRNA 6800 ncRNA chr14-2056 chr14 65495301 65495511 + 9.78 0.000 intron (NM_004480, intron 2 of 9) intron (NM_004480, intron 2 of 9) 24304 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chrX-2773 chrX 130630903 130631113 + 9.78 0.000 intron (NM_006375, intron 13 of 14) intron (NM_006375, intron 13 of 14) 136067 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr9-3467 chr9 4894163 4894373 + 9.78 0.000 Intergenic Intergenic 43971 NR_029836 406894 NR_029836 ENSG00000199065 MIR101-2 MIRN101-2|mir-101-2 microRNA 101-2 ncRNA chrX-714 chrX 111548466 111548676 + 9.78 0.000 Intergenic HERVH-int|LTR|ERV1 36926 NM_001354473 401613 Hs.98581 NM_001354473 ENSG00000260802 SERTM2 DKFZp686D0853|LINC00890 serine rich and transmembrane domain containing 2 protein-coding chr12-4102 chr12 57665343 57665553 + 9.78 0.000 Intergenic SVA_A|Retroposon|SVA -28507 NM_001261421 10956 Hs.527861 NM_006812 ENSG00000135506 OS9 ERLEC2|OS-9 OS9 endoplasmic reticulum lectin protein-coding chr8-2029 chr8 103897025 103897235 + 9.78 0.000 intron (NM_001282881, intron 2 of 20) ERV3-16A3_I-int|LTR|ERVL 77910 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr2-5741 chr2 218471402 218471612 + 9.78 0.000 intron (NM_020935, intron 20 of 25) L2|LINE|L2 52384 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding chr11-7543 chr11 15461940 15462150 + 9.78 0.000 Intergenic L1MEc|LINE|L1 -181840 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr1-4967 chr1 54488107 54488317 + 9.78 0.000 Intergenic Intergenic -60016 NM_015547 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr5-7022 chr5 158702716 158702926 + 9.78 0.000 intron (NM_001324107, intron 15 of 15) intron (NM_001324107, intron 15 of 15) -293048 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr6-1590 chr6 26197094 26197304 + 9.78 0.000 exon (NM_003530, exon 2 of 2) exon (NM_003530, exon 2 of 2) 2094 NM_021065 3013 Hs.626666 NM_021065 ENSG00000196866 HIST1H2AD H2A.3|H2A/g|H2AFG histone cluster 1 H2A family member d protein-coding chr13-1367 chr13 92843682 92843892 + 9.78 0.000 intron (NM_004466, intron 7 of 7) intron (NM_004466, intron 7 of 7) -122173 NR_046520 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA chr7-4761 chr7 74324480 74324690 + 9.78 0.000 intron (NM_032421, intron 2 of 15) intron (NM_032421, intron 2 of 15) 35110 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr3-5351 chr3 137105538 137105748 + 9.78 0.000 Intergenic Intergenic 147660 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr4-5552 chr4 137025654 137025864 + 9.78 0.000 intron (NR_149105, intron 2 of 3) LTR16C|LTR|ERVL -167997 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr10-5417 chr10 77112165 77112375 + 9.78 0.000 intron (NM_001271519, intron 7 of 28) intron (NM_001271519, intron 7 of 28) -28561 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr11-5271 chr11 34778671 34778881 + 9.78 0.000 Intergenic L1MA8|LINE|L1 -137354 NM_001166158 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding chr13-2204 chr13 21457714 21457924 + 9.78 0.000 intron (NR_104486, intron 1 of 14) intron (NR_104486, intron 1 of 14) 1484 NM_001330059 253832 Hs.564611 NM_153251 ENSG00000180776 ZDHHC20 4933421L13Rik|DHHC-20|DHHC20 zinc finger DHHC-type containing 20 protein-coding chr4-1447 chr4 121950377 121950587 + 9.78 0.000 intron (NM_001130698, intron 1 of 11) CpG 1578 NM_001366479 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr4-1759 chr4 149765540 149765750 + 9.78 0.000 intron (NM_001363507, intron 2 of 13) LTR8B|LTR|ERV1 50198 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chrX-1726 chrX 31546251 31546461 + 9.78 0.000 intron (NM_000109, intron 55 of 78) intron (NM_000109, intron 55 of 78) -38058 NM_004014 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr9-6914 chr9 92328273 92328483 + 9.78 0.000 intron (NM_001286969, intron 1 of 6) intron (NM_001286969, intron 1 of 6) 2425 NM_001012267 401541 Hs.713775 NM_001012267 ENSG00000188312 CENPP CENP-P centromere protein P protein-coding chr1-3833 chr1 25773401 25773611 + 9.78 0.000 intron (NM_020379, intron 8 of 11) (CAGTCT)n|Simple_repeat|Simple_repeat -26687 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr13-1732 chr13 101170826 101171036 + 9.78 0.000 intron (NM_001350749, intron 15 of 43) intron (NM_001350749, intron 15 of 43) -226567 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr13-1357 chr13 71867214 71867424 + 9.78 0.000 promoter-TSS (NM_001366712) promoter-TSS (NM_001366712) -115 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr6-3333 chr6 3316688 3316898 + 9.78 0.000 intron (NM_021945, intron 5 of 10) AluJr|SINE|Alu 57846 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr5-2774 chr5 171722454 171722664 + 9.78 0.000 Intergenic AluSz|SINE|Alu -63313 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr16-4188 chr16 11084468 11084678 + 9.78 0.000 intron (NM_015226, intron 18 of 22) intron (NM_015226, intron 18 of 22) 140009 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr12-2956 chr12 106139843 106140053 + 9.78 0.000 promoter-TSS (NM_014840) promoter-TSS (NM_014840) 85 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr12-4141 chr12 75725581 75725791 + 9.78 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger -214077 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr1-8201 chr1 22896885 22897095 + 9.78 0.000 intron (NM_004442, intron 9 of 15) intron (NM_004442, intron 9 of 15) -33764 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr19-3972 chr19 1053669 1053879 + 9.78 0.000 intron (NM_019112, intron 24 of 46) intron (NM_019112, intron 24 of 46) -12185 NM_001258328 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr9-3146 chr9 104020378 104020588 + 9.78 0.000 Intergenic Intergenic 20774 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr19-3508 chr19 40962832 40963042 + 9.78 0.000 Intergenic Intergenic -28345 NM_000767 1555 Hs.1360 NM_000767 ENSG00000197408 CYP2B6 CPB6|CYP2B|CYP2B7|CYP2B7P|CYPIIB6|EFVM|IIB1|P450 cytochrome P450 family 2 subfamily B member 6 protein-coding chr3-2088 chr3 15268123 15268333 + 9.78 0.000 intron (NM_001018009, intron 4 of 8) intron (NM_001018009, intron 4 of 8) 14044 NR_046084 100505696 Hs.745026 NR_046084 ENSG00000224660 SH3BP5-AS1 - SH3BP5 antisense RNA 1 ncRNA chr17-2526 chr17 17412350 17412560 + 9.78 0.000 Intergenic AluJb|SINE|Alu -64545 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr3-4694 chr3 50254367 50254577 + 9.78 0.000 intron (NM_001282617, intron 4 of 8) intron (NM_001282617, intron 4 of 8) 7562 NM_001166425 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr2-13446 chr2 144460179 144460389 + 9.78 0.000 intron (NM_001171653, intron 2 of 8) intron (NM_001171653, intron 2 of 8) -59330 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chr12-792 chr12 89708861 89709071 + 9.78 0.000 promoter-TSS (NM_001366525) promoter-TSS (NM_001366525) 11 NR_028138 338758 Hs.601766 NR_028138 ENSG00000271614 ATP2B1-AS1 LINC00936 ATP2B1 antisense RNA 1 ncRNA chr10-2846 chr10 47296239 47296449 + 9.78 0.000 Intergenic Intergenic -3853 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr1-10680 chr1 186532525 186532735 + 9.78 0.000 Intergenic L1PA11|LINE|L1 -71516 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding chr10-3591 chr10 88849377 88849587 + 9.78 0.000 intron (NM_144590, intron 1 of 5) intron (NM_144590, intron 1 of 5) 2362 NM_144590 118932 Hs.217484 NM_144590 ENSG00000152766 ANKRD22 - ankyrin repeat domain 22 protein-coding chr4-2724 chr4 5054393 5054603 + 9.78 0.000 intron (NM_001306082, intron 1 of 12) L2b|LINE|L2 3018 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr11-6183 chr11 45269719 45269929 + 9.78 0.000 intron (NM_001247987, intron 1 of 7) intron (NM_001247987, intron 1 of 7) 16517 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr3-4543 chr3 128932108 128932318 + 9.78 0.000 intron (NM_001348520, intron 11 of 14) intron (NM_001348520, intron 11 of 14) 52593 NM_014049 28976 Hs.567482 NM_014049 ENSG00000177646 ACAD9 MC1DN20|NPD002 acyl-CoA dehydrogenase family member 9 protein-coding chr3-9078 chr3 27404599 27404809 + 9.78 0.000 intron (NM_001258380, intron 13 of 23) intron (NM_001258380, intron 13 of 23) -35244 NM_152534 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr1-10436 chr1 159230550 159230760 + 9.78 0.000 Intergenic MIRb|SINE|MIR 25780 NM_001122951 2532 Hs.153381 NM_002036 ENSG00000213088 ACKR1 CCBP1|CD234|DARC|DARC/ACKR1|Dfy|FY|GPD|GpFy|WBCQ1 atypical chemokine receptor 1 (Duffy blood group) protein-coding chr9-3355 chr9 114067541 114067751 + 9.78 0.000 intron (NM_001633, intron 6 of 9) HAL1b|LINE|L1 10654 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr7-4193 chr7 130718150 130718360 + 9.78 0.000 Intergenic Intergenic 15778 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr15-932 chr15 75327006 75327216 + 9.78 0.000 Intergenic Intergenic -8952 NM_001321847 54939 Hs.351327 NM_017828 ENSG00000140365 COMMD4 - COMM domain containing 4 protein-coding chr12-4290 chr12 123432692 123432902 + 9.78 0.000 intron (NM_145058, intron 1 of 3) intron (NM_145058, intron 1 of 3) 3936 NM_145058 196383 Hs.488173 NM_145058 ENSG00000150977 RILPL2 RLP2 Rab interacting lysosomal protein like 2 protein-coding chr12-6666 chr12 2721427 2721637 + 9.78 0.000 Intergenic ERVL-E-int|LTR|ERVL -30375 NR_045725 100652846 Hs.683896 NR_045725 ENSG00000246627 CACNA1C-AS1 - CACNA1C antisense RNA 1 ncRNA chr4-4744 chr4 94945102 94945312 + 9.78 0.000 intron (NM_001203, intron 2 of 12) intron (NM_001203, intron 2 of 12) -51025 NM_001256792 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr19-1948 chr19 40646291 40646501 + 9.78 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 43768 NM_001289980 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr2-14515 chr2 228474549 228474759 + 9.78 0.000 Intergenic Intergenic 136741 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr14-1545 chr14 64738904 64739114 + 9.78 0.000 intron (NM_001308147, intron 15 of 16) intron (NM_001308147, intron 15 of 16) 34585 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr13-1240 chr13 92804495 92804705 + 9.78 0.000 intron (NM_004466, intron 7 of 7) Tigger1|DNA|TcMar-Tigger -82986 NR_046520 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA chrX-1349 chrX 138736824 138737034 + 9.78 0.000 intron (NM_001139498, intron 2 of 5) intron (NM_001139498, intron 2 of 5) 2424 NM_033642 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr4-3717 chr4 72037340 72037550 + 9.78 0.000 intron (NM_004885, intron 1 of 3) intron (NM_004885, intron 1 of 3) -1687 NM_053036 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr20-1320 chr20 63018193 63018403 + 9.78 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 8915 NR_033370 63930 Hs.640084 NR_033370 ENSG00000272259 LINC01749 - long intergenic non-protein coding RNA 1749 ncRNA chr6-8494 chr6 157351263 157351473 + 9.78 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -27109 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr19-3468 chr19 34097657 34097867 + 9.78 0.000 Intergenic L1MC3|LINE|L1 -74742 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr8-2460 chr8 127741840 127742050 + 9.78 0.000 3' UTR (NM_001354870, exon 3 of 3) 3' UTR (NM_001354870, exon 3 of 3) 5714 NM_002467 4609 Hs.202453 NM_002467 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc MYC proto-oncogene, bHLH transcription factor protein-coding chr16-5079 chr16 82421428 82421638 + 9.78 0.000 Intergenic Intergenic -205436 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chrX-1343 chrX 136497262 136497472 + 9.78 0.000 promoter-TSS (NM_014500) promoter-TSS (NM_014500) -225 NM_014500 27336 Hs.204475 NM_014500 ENSG00000102241 HTATSF1 TAT-SF1|TATSF1|dJ196E23.2 HIV-1 Tat specific factor 1 protein-coding chr20-3853 chr20 25491055 25491265 + 9.78 0.000 intron (NM_025176, intron 11 of 23) intron (NM_025176, intron 11 of 23) 83477 NR_134574 9837 Hs.658464 NM_021067 ENSG00000101003 GINS1 IMD55|PSF1 GINS complex subunit 1 protein-coding chr10-6989 chr10 70693992 70694202 + 9.78 0.000 intron (NM_080722, intron 2 of 21) intron (NM_080722, intron 2 of 21) 21591 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr2-13102 chr2 113125656 113125866 + 9.78 0.000 intron (NM_001318914, intron 3 of 6) intron (NM_001318914, intron 3 of 6) -1837 NM_173842 3557 Hs.81134 NM_000577 ENSG00000136689 IL1RN DIRA|ICIL-1RA|IL-1RN|IL-1ra|IL-1ra3|IL1F3|IL1RA|IRAP|MVCD4 interleukin 1 receptor antagonist protein-coding chr19-6526 chr19 18747511 18747721 + 9.78 0.000 intron (NM_015321, intron 4 of 13) AluSz|SINE|Alu 43689 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chrX-991 chrX 11606202 11606412 + 9.78 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) 59613 NR_109776 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr10-3202 chr10 98528264 98528474 + 9.78 0.000 intron (NM_021828, intron 9 of 11) intron (NM_021828, intron 9 of 11) -81406 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr2-13321 chr2 131811262 131811472 + 9.78 0.000 Intergenic L1PBa|LINE|L1 -9706 NR_161366 408029 Hs.145567 NR_161366 C2orf27B - chromosome 2 open reading frame 27B ncRNA chr2-8994 chr2 193014908 193015118 + 9.78 0.000 Intergenic L1PB4|LINE|L1 265168 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr8-3131 chr8 64798224 64798434 + 9.78 0.000 intron (NM_004820, intron 1 of 5) intron (NM_004820, intron 1 of 5) 408 NM_001324112 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr4-3601 chr4 6986106 6986316 + 9.78 0.000 promoter-TSS (NM_001113363) promoter-TSS (NM_001113363) -998 NM_001113363 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr5-2020 chr5 43000253 43000463 + 9.78 0.000 Intergenic CpG -7025 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr5-8216 chr5 108212935 108213145 + 9.78 0.000 intron (NM_001163315, intron 5 of 8) L1PA7|LINE|L1 169058 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr1-11329 chr1 24590457 24590667 + 9.78 0.000 intron (NM_001010980, intron 1 of 3) intron (NM_001010980, intron 1 of 3) 34475 NM_001010980 400746 Hs.200253 NM_001010980 ENSG00000184454 NCMAP C1orf130|MP11 non-compact myelin associated protein protein-coding chr5-4261 chr5 139142190 139142400 + 9.78 0.000 intron (NM_022464, intron 1 of 9) L1MB4|LINE|L1 56073 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr7-6116 chr7 121520278 121520488 + 9.78 0.000 Intergenic Intergenic -124015 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr10-3924 chr10 83460341 83460551 + 9.78 0.000 Intergenic AluJr4|SINE|Alu 216643 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr10-4289 chr10 11871146 11871356 + 9.78 0.000 3' UTR (NM_153256, exon 4 of 4) 3' UTR (NM_153256, exon 4 of 4) 23459 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr12-4726 chr12 51204736 51204946 + 9.78 0.000 intron (NR_147052, intron 1 of 9) intron (NR_147052, intron 1 of 9) 12464 NM_001368008 5463 Hs.555886 NM_002702 ENSG00000184271 POU6F1 BRN5|MPOU|TCFB1 POU class 6 homeobox 1 protein-coding chr2-3443 chr2 108979567 108979777 + 9.78 0.000 intron (NM_022336, intron 1 of 11) intron (NM_022336, intron 1 of 11) 9548 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr12-7271 chr12 52468280 52468490 + 9.78 0.000 TTS (NM_173086) TTS (NM_173086) 5420 NM_173086 286887 Hs.709234 NM_173086 ENSG00000170465 KRT6C K6E|KRT6E|PPKNEFD keratin 6C protein-coding chr20-1314 chr20 62333513 62333723 + 9.78 0.000 exon (NM_005560, exon 24 of 80) exon (NM_005560, exon 24 of 80) -1061 NR_039915 100616340 NR_039915 ENSG00000284074 MIR4758 - microRNA 4758 ncRNA chr12-4013 chr12 30820483 30820693 + 9.78 0.000 Intergenic Intergenic 24907 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chrX-1204 chrX 71251402 71251612 + 9.78 0.000 intron (NM_005096, intron 3 of 24) intron (NM_005096, intron 3 of 24) 2633 NM_201599 9203 Hs.522684 NM_005096 ENSG00000147130 ZMYM3 DXS6673E|MYM|XFIM|ZNF198L2|ZNF261 zinc finger MYM-type containing 3 protein-coding chr1-7562 chr1 203083964 203084174 + 9.78 0.000 intron (NM_002479, intron 2 of 2) intron (NM_002479, intron 2 of 2) 274 NR_160550 114004358 NR_160550 MYOPARR - myogenin promoter associated myogenic regulatory antisense long non coding RNA ncRNA chr2-6547 chr2 215998569 215998779 + 9.78 0.000 intron (NM_018000, intron 1 of 4) intron (NM_018000, intron 1 of 4) 14877 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr6-5135 chr6 123233293 123233503 + 9.78 0.000 intron (NM_006073, intron 38 of 40) intron (NM_006073, intron 38 of 40) -206206 NR_110844 101927990 Hs.660877 NR_110844 TRDN-AS1 HRAT13 TRDN antisense RNA 1 ncRNA chr8-3385 chr8 60106254 60106464 + 9.78 0.000 Intergenic Intergenic 175041 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr20-1500 chr20 32452144 32452354 + 9.78 0.000 exon (NM_080616, exon 7 of 8) exon (NM_080616, exon 7 of 8) 31241 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr4-5525 chr4 107279678 107279888 + 9.78 0.000 Intergenic Intergenic -243470 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr17-1922 chr17 76562823 76563033 + 9.78 0.000 intron (NR_038110, intron 2 of 2) intron (NR_038110, intron 2 of 2) 1295 NR_004395 677848 NR_004395 ENSG00000278261 SNORD1A R38A|snR38A small nucleolar RNA, C/D box 1A snoRNA chr1-5252 chr1 202838272 202838482 + 9.78 0.000 Intergenic Intergenic 18120 NR_038135 641515 Hs.23459 NR_038135 ENSG00000184774 MGAT4EP - MGAT4 family member E, pseudogene pseudo chr2-3833 chr2 27449242 27449452 + 9.78 0.000 exon (NM_015662, exon 39 of 48) exon (NM_015662, exon 39 of 48) 6966 NM_173853 200634 Hs.59509 NM_173853 ENSG00000157992 KRTCAP3 KCP3 keratinocyte associated protein 3 protein-coding chr3-9317 chr3 44104279 44104489 + 9.78 0.000 Intergenic Intergenic -9828 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr17-4758 chr17 43315412 43315622 + 9.78 0.000 Intergenic CpG -15286 NR_002716 6066 NR_002716 ENSG00000274585 RNU2-1 RNU2|U2 RNA, U2 small nuclear 1 snRNA chr10-1333 chr10 99232566 99232776 + 9.78 0.000 intron (NM_021828, intron 1 of 11) CpG 3204 NM_001166246 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding chr15-2162 chr15 78093428 78093638 + 9.78 0.000 intron (NM_001101404, intron 1 of 5) intron (NM_001101404, intron 1 of 5) 948 NM_001101404 646892 Hs.569511 NM_001101404 ENSG00000183476 SH2D7 - SH2 domain containing 7 protein-coding chr8-5377 chr8 22796569 22796779 + 9.78 0.000 intron (NM_001363233, intron 4 of 6) L1PB4|LINE|L1 -81298 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr20-1650 chr20 24704332 24704542 + 9.78 0.000 Intergenic MER5A1|DNA|hAT-Charlie 234476 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr10-2562 chr10 69517751 69517961 + 9.78 0.000 Intergenic Intergenic 55566 NM_020999 50674 Hs.532682 NM_020999 ENSG00000122859 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding chr19-2880 chr19 29524456 29524666 + 9.78 0.000 intron (NR_040029, intron 1 of 9) intron (NR_040029, intron 1 of 9) 1191 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr3-6660 chr3 129197357 129197567 + 9.78 0.000 Intergenic Intergenic -13566 NM_001127196 7555 Hs.518249 NM_003418 ENSG00000169714 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger nucleic acid binding protein protein-coding chr12-2933 chr12 75667039 75667249 + 9.78 0.000 Intergenic Intergenic -155535 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr4-5769 chr4 70614090 70614300 + 9.78 0.000 Intergenic Intergenic -14549 NM_031889 10117 Hs.667018 NM_031889 ENSG00000132464 ENAM ADAI|AI1C|AIH2 enamelin protein-coding chrX-1558 chrX 48558247 48558457 + 9.78 0.000 intron (NR_145499, intron 4 of 6) intron (NR_145499, intron 4 of 6) -16132 NM_006743 5935 Hs.301404 NM_006743 ENSG00000102317 RBM3 IS1-RNPL|RNPL RNA binding motif protein 3 protein-coding chr4-1940 chr4 105061464 105061674 + 9.78 0.000 Intergenic Intergenic -84306 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr4-7367 chr4 60149434 60149644 + 9.78 0.000 Intergenic Intergenic -773080 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr22-2578 chr22 29188014 29188224 + 9.78 0.000 Intergenic Intergenic -17777 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr19-5594 chr19 2365875 2366085 + 9.78 0.000 Intergenic AluJo|SINE|Alu -23791 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr4-5660 chr4 11246960 11247170 + 9.78 0.000 Intergenic L1PA7|LINE|L1 -121762 NR_030298 693157 NR_030298 ENSG00000207716 MIR572 MIRN572|hsa-mir-572 microRNA 572 ncRNA chr16-2064 chr16 78684099 78684309 + 9.78 0.000 intron (NM_001291997, intron 7 of 7) MLT1M|LTR|ERVL-MaLR 584550 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr1-12778 chr1 77654706 77654916 + 9.78 0.000 intron (NM_001308237, intron 1 of 13) MSTC|LTR|ERVL-MaLR 27847 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr19-6196 chr19 5484843 5485053 + 9.78 0.000 Intergenic Intergenic 29531 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr19-3386 chr19 13597727 13597937 + 9.78 0.000 Intergenic Intergenic -91353 NM_023035 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr11-7234 chr11 3765974 3766184 + 9.78 0.000 intron (NR_157590, intron 8 of 31) L1MB7|LINE|L1 31467 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chr6-2925 chr6 22598519 22598729 + 9.78 0.000 Intergenic (GCAGAG)n|Simple_repeat|Simple_repeat 29058 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr19-5388 chr19 11081607 11081817 + 9.78 0.000 Intergenic L1ME4b|LINE|L1 -7650 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr11-9043 chr11 27571122 27571332 + 9.78 0.000 intron (NR_033315, intron 2 of 6) intron (NR_033315, intron 2 of 6) -56180 NR_107054 102465881 NR_107054 ENSG00000278483 MIR8087 hsa-mir-8087 microRNA 8087 ncRNA chr15-4122 chr15 79289780 79289990 + 9.78 0.000 intron (NM_001146341, intron 1 of 1) (TG)n|Simple_repeat|Simple_repeat -5940 NR_038997 729911 Hs.513931 NR_038997 ENSG00000259234 ANKRD34C-AS1 - ANKRD34C antisense RNA 1 ncRNA chr9-3171 chr9 123036964 123037174 + 9.78 0.000 intron (NM_012197, intron 13 of 25) intron (NM_012197, intron 13 of 25) 3426 NM_005294 2844 Hs.722039 NM_005294 ENSG00000011454 GPR21 - G protein-coupled receptor 21 protein-coding chr9-7416 chr9 21620154 21620364 + 9.78 0.000 Intergenic Intergenic -60461 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr9-6132 chr9 31650774 31650984 + 9.78 0.000 Intergenic Intergenic -269389 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr1-14400 chr1 44413243 44413453 + 9.78 0.000 intron (NM_001319956, intron 2 of 14) intron (NM_001319956, intron 2 of 14) 8093 NM_018150 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr10-3627 chr10 95814103 95814313 + 9.78 0.000 intron (NM_001312654, intron 2 of 9) intron (NM_001312654, intron 2 of 9) 58045 NM_001776 953 Hs.576612 NM_001776 ENSG00000138185 ENTPD1 ATPDase|CD39|NTPDase-1|SPG64 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding chr14-2208 chr14 101792210 101792420 + 9.78 0.000 intron (NM_001161726, intron 3 of 14) intron (NM_001161726, intron 3 of 14) -17520 NM_002719 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr1-6649 chr1 45837278 45837488 + 9.78 0.000 intron (NM_001324320, intron 3 of 29) L1ME1|LINE|L1 -26965 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr4-4413 chr4 45613810 45614020 + 9.78 0.000 Intergenic MER48|LTR|ERV1 510139 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr15-1212 chr15 57501237 57501447 + 9.78 0.000 intron (NM_032866, intron 8 of 18) MIR|SINE|MIR -90562 NR_104368 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr11-4174 chr11 57569412 57569622 + 9.78 0.000 Intergenic L2c|LINE|L2 -1187 NM_198183 9246 Hs.425777 NM_004223 ENSG00000156587 UBE2L6 RIG-B|UBCH8 ubiquitin conjugating enzyme E2 L6 protein-coding chr12-4750 chr12 52179118 52179328 + 9.78 0.000 intron (NM_182507, intron 4 of 8) intron (NM_182507, intron 4 of 8) 12791 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr1-4468 chr1 9275413 9275623 + 9.78 0.000 Intergenic Intergenic -17376 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr12-3616 chr12 74706257 74706467 + 9.78 0.000 Intergenic Intergenic 168527 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr4-2181 chr4 109284104 109284314 + 9.78 0.000 intron (NM_198721, intron 3 of 36) AluSx|SINE|Alu 18449 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr15-1039 chr15 100918113 100918323 + 9.78 0.000 non-coding (NR_135831, exon 1 of 2) non-coding (NR_135831, exon 1 of 2) 1065 NR_135831 101927751 Hs.659224 NR_135827 ENSG00000259583 LOC101927751 - uncharacterized LOC101927751 ncRNA chr14-3233 chr14 75381612 75381822 + 9.78 0.000 Intergenic L1MC3|LINE|L1 -46007 NM_001135047 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chr14-2018 chr14 59208240 59208450 + 9.78 0.000 intron (NM_001270520, intron 1 of 24) MER72B|LTR|ERV1 19678 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr9-1578 chr9 77457011 77457221 + 9.78 0.000 intron (NR_121184, intron 2 of 4) intron (NR_121184, intron 2 of 4) 9467 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr17-3285 chr17 44901532 44901742 + 9.78 0.000 exon (NM_001258399, exon 3 of 4) exon (NM_001258399, exon 3 of 4) 1908 NM_001258396 388389 Hs.743398 NM_213607 ENSG00000167131 CCDC103 CILD17|PR46b|SMH coiled-coil domain containing 103 protein-coding chrX-1250 chrX 98218184 98218394 + 9.78 0.000 Intergenic LTR33A_|LTR|ERVL -653754 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr9-3103 chr9 37517583 37517793 + 9.78 0.000 intron (NM_012166, intron 9 of 10) L2c|LINE|L2 31740 NM_022490 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr1-14481 chr1 48097901 48098111 + 9.78 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 84422 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo chr3-3184 chr3 184305722 184305932 + 9.78 0.000 exon (NM_001278709, exon 11 of 19) exon (NM_001278709, exon 11 of 19) 5246 NM_001278708 5708 Hs.518464 NM_002808 ENSG00000175166 PSMD2 P97|RPN1|S2|TRAP2 proteasome 26S subunit, non-ATPase 2 protein-coding chr18-1270 chr18 58375587 58375797 + 9.78 0.000 intron (NM_001144965, intron 24 of 30) intron (NM_001144965, intron 24 of 30) -75382 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr3-6179 chr3 60017864 60018074 + 9.78 0.000 intron (NM_001320901, intron 2 of 6) MLT1G1|LTR|ERVL-MaLR 62940 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr18-1425 chr18 10518551 10518761 + 9.78 0.000 Intergenic Intergenic -7371 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr10-2546 chr10 62082483 62082693 + 9.78 0.000 intron (NM_001244638, intron 5 of 6) intron (NM_001244638, intron 5 of 6) 33231 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr21-1489 chr21 38985040 38985250 + 9.78 0.000 Intergenic Intergenic -7371 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr5-1774 chr5 33258119 33258329 + 9.78 0.000 Intergenic Intergenic 28489 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr16-1795 chr16 3045463 3045673 + 9.78 0.000 promoter-TSS (NM_022468) promoter-TSS (NM_022468) -993 NM_022468 64386 Hs.654979 NM_004142 ENSG00000008516 MMP25 MMP-25|MMP20|MMP20A|MMPL1|MT-MMP 6|MT-MMP6|MT6-MMP|MT6MMP|MTMMP6 matrix metallopeptidase 25 protein-coding chr3-7429 chr3 119864473 119864683 + 9.78 0.000 intron (NM_001354596, intron 8 of 9) intron (NM_001354596, intron 8 of 9) 81868 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding chr12-7208 chr12 50088050 50088260 + 9.78 0.000 intron (NM_139071, intron 5 of 11) intron (NM_139071, intron 5 of 11) 2813 NM_003076 6602 Hs.79335 NM_003076 ENSG00000066117 SMARCD1 BAF60A|CRACD1|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding chr6-2072 chr6 127100709 127100919 + 9.78 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -17857 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr19-5575 chr19 1301969 1302179 + 9.78 0.000 TTS (NM_001405) TTS (NM_001405) 16201 NM_001405 1943 NM_001405 ENSG00000099617 EFNA2 ELF-1|EPLG6|HEK7-L|LERK-6|LERK6 ephrin A2 protein-coding chr5-3528 chr5 11055788 11055998 + 9.78 0.000 intron (NM_001288715, intron 15 of 20) intron (NM_001288715, intron 15 of 20) -294659 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr12-5264 chr12 109694305 109694515 + 9.78 0.000 Intergenic MIRb|SINE|MIR -19415 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr2-5690 chr2 204167786 204167996 + 9.78 0.000 Intergenic MER1A|DNA|hAT-Charlie 231143 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr11-2288 chr11 14359227 14359437 + 9.78 0.000 promoter-TSS (NM_001177315) promoter-TSS (NM_001177315) -149 NM_012250 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr3-4774 chr3 111070247 111070457 + 9.78 0.000 promoter-TSS (NR_045114) promoter-TSS (NR_045114) -393 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr5-2924 chr5 138230429 138230639 + 9.78 0.000 Intergenic Intergenic -17211 NM_004661 8697 Hs.73625 NM_004661 ENSG00000094880 CDC23 ANAPC8|APC8|CUT23 cell division cycle 23 protein-coding chr8-3003 chr8 110902298 110902508 + 9.78 0.000 Intergenic OldhAT1|DNA|hAT-Ac 125030 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr20-1722 chr20 41030679 41030889 + 9.78 0.000 intron (NM_003286, intron 2 of 20) intron (NM_003286, intron 2 of 20) 1962 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr5-3911 chr5 161703023 161703233 + 9.78 0.000 TTS (NM_000811) TTS (NM_000811) 17407 NM_000811 2559 Hs.90791 NM_000811 ENSG00000145863 GABRA6 - gamma-aminobutyric acid type A receptor alpha6 subunit protein-coding chr7-2300 chr7 79377148 79377358 + 9.78 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) -75704 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr10-6039 chr10 127081329 127081539 + 9.78 0.000 intron (NM_001290223, intron 23 of 51) intron (NM_001290223, intron 23 of 51) 115157 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr2-4880 chr2 114010561 114010771 + 9.78 0.000 intron (NR_148509, intron 1 of 1) AluJb|SINE|Alu -30682 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr3-7739 chr3 54546573 54546783 + 9.78 0.000 intron (NM_018398, intron 5 of 37) Tigger13a|DNA|TcMar-Tigger 93179 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr2-7832 chr2 46738628 46738838 + 9.78 0.000 intron (NM_144949, intron 1 of 1) intron (NM_144949, intron 1 of 1) 39438 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr4-3261 chr4 95830023 95830233 + 9.78 0.000 Intergenic LTR79|LTR|ERVL -9965 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding chr7-4041 chr7 158723320 158723530 + 9.78 0.000 Intergenic Intergenic -18621 NM_001281933 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr7-9560 chr7 141815027 141815237 + 9.78 0.000 Intergenic MER110-int|LTR|ERV1 24915 NM_018980 54429 Hs.675370 NM_018980 ENSG00000127366 TAS2R5 T2R5 taste 2 receptor member 5 protein-coding chr20-1398 chr20 8116537 8116747 + 9.78 0.000 Intergenic Intergenic -15624 NM_015192 23236 Hs.431173 NM_015192 ENSG00000182621 PLCB1 EIEE12|PI-PLC|PLC-154|PLC-I|PLC-beta-1|PLC154|PLCB1A|PLCB1B phospholipase C beta 1 protein-coding chr11-1182 chr11 68855526 68855736 + 9.78 0.000 Intergenic CpG -13700 NM_001031847 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr20-1369 chr20 45416019 45416229 + 9.78 0.000 promoter-TSS (NR_047691) promoter-TSS (NR_047691) -17 NR_047692 51604 Hs.437388 NM_015937 ENSG00000124155 PIGT CGI-06|MCAHS3|NDAP|PNH2 phosphatidylinositol glycan anchor biosynthesis class T protein-coding chr18-2252 chr18 70659084 70659294 + 9.78 0.000 Intergenic Intergenic -8235 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr7-6259 chr7 134899791 134900001 + 9.78 0.000 intron (NM_033139, intron 1 of 12) AluJr|SINE|Alu 8438 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr2-5842 chr2 237669915 237670125 + 9.78 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -22144 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr9-5684 chr9 124059491 124059701 + 9.78 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 47828 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr4-4077 chr4 3771535 3771745 + 9.78 0.000 Intergenic Intergenic 5255 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr20-1765 chr20 50904241 50904451 + 9.78 0.000 intron (NM_181442, intron 1 of 3) AluJr|SINE|Alu 5445 NM_001282532 23394 Hs.293736 NM_015339 ENSG00000101126 ADNP ADNP1|HVDAS|MRD28 activity dependent neuroprotector homeobox protein-coding chr12-4105 chr12 58393238 58393448 + 9.78 0.000 Intergenic L3|LINE|CR1 -198359 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr5-2429 chr5 122155029 122155239 + 9.78 0.000 Intergenic Intergenic -5042 NM_001195535 100505841 Hs.733368 NM_001195535 LOC100505841 - zinc finger protein 474-like protein-coding chr2-8480 chr2 126565740 126565950 + 9.78 0.000 Intergenic L2c|LINE|L2 -90090 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr9-4438 chr9 17349917 17350127 + 9.78 0.000 intron (NM_001365029, intron 12 of 25) LTR86A1|LTR|ERVL 214982 NM_017738 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr17-3529 chr17 70716720 70716930 + 9.78 0.000 Intergenic Intergenic 485354 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr9-3361 chr9 116748483 116748693 + 9.78 0.000 intron (NM_014010, intron 12 of 21) L2b|LINE|L2 61283 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr15-974 chr15 52558294 52558504 + 9.78 0.000 intron (NM_006628, intron 1 of 2) AluJb|SINE|Alu 10433 NM_001330309 10776 Hs.512908 NM_006628 ENSG00000128989 ARPP19 ARPP-16|ARPP-19|ARPP16|ENSAL cAMP regulated phosphoprotein 19 protein-coding chr14-1019 chr14 32075971 32076181 + 9.78 0.000 non-coding (NR_027263, exon 1 of 1) non-coding (NR_027263, exon 1 of 1) 623 NR_027263 84837 Hs.496755 NM_032751 ARHGAP5-AS1 C14orf128 ARHGAP5 antisense RNA 1 (head to head) ncRNA chr19-6843 chr19 42543490 42543700 + 9.78 0.000 intron (NR_073180, intron 2 of 2) intron (NR_073180, intron 2 of 2) -15114 NM_001184816 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr9-7128 chr9 131409568 131409778 + 9.78 0.000 Intergenic Intergenic -20417 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr9-4098 chr9 129548629 129548839 + 9.78 0.000 Intergenic Intergenic 60074 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr13-1917 chr13 60733405 60733615 + 9.78 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger 60555 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr5-5165 chr5 109453374 109453584 + 9.78 0.000 Intergenic Intergenic -43505 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr2-4561 chr2 67997504 67997714 + 9.78 0.000 Intergenic Intergenic 65395 NM_001190263 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding chr2-5427 chr2 114536966 114537176 + 9.78 0.000 intron (NM_001321908, intron 2 of 25) intron (NM_001321908, intron 2 of 25) 75494 NM_001321908 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr4-2295 chr4 26178916 26179126 + 9.78 0.000 Intergenic Intergenic -140689 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr12-3423 chr12 109739816 109740026 + 9.78 0.000 intron (NR_026662, intron 1 of 2) intron (NR_026662, intron 1 of 2) 26096 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr7-2132 chr7 34025807 34026017 + 9.78 0.000 intron (NM_133468, intron 7 of 15) intron (NM_133468, intron 7 of 15) 120373 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr4-3087 chr4 151099981 151100191 + 9.78 0.000 intron (NM_001267699, intron 1 of 2) intron (NM_001267699, intron 1 of 2) 458 NM_001006 6189 Hs.356572 NM_001006 ENSG00000145425 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding chrX-4205 chrX 36730000 36730210 + 9.78 0.000 Intergenic Intergenic -278254 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr2-8641 chr2 146085596 146085806 + 9.78 0.000 Intergenic MLT1E1A-int|LTR|ERVL-MaLR -501356 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-5639 chr2 191612509 191612719 + 9.78 0.000 Intergenic Intergenic -65458 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chrX-2137 chrX 33089955 33090165 + 9.78 0.000 intron (NM_000109, intron 1 of 78) intron (NM_000109, intron 1 of 78) 38367 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-4404 chr3 196948245 196948455 + 9.78 0.000 exon (NM_025163, exon 3 of 3) exon (NM_025163, exon 3 of 3) 5676 NM_001355243 152217 Hs.118820 NM_001355243 ENSG00000270170 NCBP2AS2 HIAR|NCBP2-AS2 NCBP2 antisense 2 (head to head) protein-coding chr18-2838 chr18 7248655 7248865 + 9.78 0.000 Intergenic Intergenic 17656 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr14-1096 chr14 64654178 64654388 + 9.78 0.000 Intergenic MIR|SINE|MIR -50141 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr18-1193 chr18 28048805 28049015 + 9.78 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) -12269 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr6-6516 chr6 125495387 125495597 + 9.78 0.000 Intergenic MER5A|DNA|hAT-Charlie -178861 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr10-8392 chr10 82649496 82649706 + 9.78 0.000 intron (NR_163253, intron 3 of 10) AluSx|SINE|Alu -416681 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chrX-3509 chrX 42951767 42951977 + 9.78 0.000 Intergenic LTR49-int|LTR|ERV1 -173709 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr6-2601 chr6 108587823 108588033 + 9.78 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 27011 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr5-5554 chr5 148316174 148316384 + 9.78 0.000 TTS (NM_032566) TTS (NM_032566) 3856 NM_032566 84651 Hs.244569 NM_032566 ENSG00000145879 SPINK7 ECG2|ECRG2 serine peptidase inhibitor, Kazal type 7 (putative) protein-coding chr11-4022 chr11 8924005 8924215 + 9.78 0.000 intron (NM_020643, intron 5 of 6) intron (NM_020643, intron 5 of 6) 8837 NM_020643 56673 Hs.277349 NM_020643 ENSG00000176029 C11orf16 - chromosome 11 open reading frame 16 protein-coding chr5-4789 chr5 56552679 56552889 + 9.78 0.000 intron (NR_161255, intron 2 of 5) intron (NR_161255, intron 2 of 5) 53472 NR_161255 101928448 Hs.208052 NM_001287053 ENSG00000225940 C5orf67 - chromosome 5 open reading frame 67 ncRNA chr1-8541 chr1 158759311 158759521 + 9.78 0.000 Intergenic L1PA13|LINE|L1 4600 NM_001005184 128371 Hs.553591 NM_001005184 ENSG00000180433 OR6K6 OR1-21 olfactory receptor family 6 subfamily K member 6 protein-coding chr8-2721 chr8 100583918 100584128 + 9.78 0.000 intron (NM_152628, intron 12 of 13) intron (NM_152628, intron 12 of 13) -24264 NM_001270377 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr1-7704 chr1 24635303 24635513 + 9.78 0.000 Intergenic Intergenic -7894 NM_001366588 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr7-3562 chr7 19294593 19294803 + 9.78 0.000 Intergenic Intergenic -149277 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chrX-3585 chrX 76868236 76868446 + 9.78 0.000 intron (NR_110403, intron 1 of 3) intron (NR_110403, intron 1 of 3) 51019 NR_029909 494333 NR_029909 ENSG00000283242 MIR384 MIRN384|hsa-mir-384 microRNA 384 ncRNA chr2-5784 chr2 225794917 225795127 + 9.78 0.000 Intergenic Intergenic -347772 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr6-1822 chr6 148191571 148191781 + 9.78 0.000 Intergenic Intergenic -80652 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr2-3734 chr2 240374296 240374506 + 9.78 0.000 Intergenic Intergenic -61262 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr5-3705 chr5 11139866 11140076 + 9.78 0.000 intron (NM_001288715, intron 11 of 20) MLT1D|LTR|ERVL-MaLR -378737 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr22-1688 chr22 46233394 46233604 + 9.78 0.000 intron (NM_001001928, intron 7 of 7) intron (NM_001001928, intron 7 of 7) 16794 NM_207327 150383 Hs.103110 NM_207327 ENSG00000205643 CDPF1 C22orf40 cysteine rich DPF motif domain containing 1 protein-coding chr11-10326 chr11 109511401 109511611 + 9.78 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 89316 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr16-2479 chr16 87945525 87945735 + 9.78 0.000 Intergenic Intergenic -5804 NM_017869 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr1-6307 chr1 2035525 2035735 + 9.78 0.000 Intergenic ERVL-E-int|LTR|ERVL 14440 NR_135509 105378591 Hs.371879 NR_135509 ENSG00000226969 LOC105378591 - uncharacterized LOC105378591 ncRNA chr10-2296 chr10 24350436 24350646 + 9.78 0.000 intron (NM_019590, intron 2 of 20) intron (NM_019590, intron 2 of 20) 74856 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr1-9962 chr1 79708930 79709140 + 9.78 0.000 Intergenic Intergenic -702305 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr11-4314 chr11 69094708 69094918 + 9.78 0.000 Intergenic Intergenic 11637 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr6-3180 chr6 127177070 127177280 + 9.78 0.000 intron (NM_032784, intron 4 of 4) intron (NM_032784, intron 4 of 4) 58504 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr2-10038 chr2 28547366 28547576 + 9.78 0.000 intron (NM_001170585, intron 14 of 56) intron (NM_001170585, intron 14 of 56) -18886 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr8-3232 chr8 139814988 139815198 + 9.78 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -111970 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr2-3608 chr2 86261254 86261464 + 9.78 0.000 intron (NM_001371279, intron 3 of 8) LTR5_Hs|LTR|ERVK 61902 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr6-5095 chr6 118985345 118985555 + 9.78 0.000 intron (NM_024581, intron 9 of 17) Helitron3Na_Mam|RC|Helitron -50288 NM_153255 254394 Hs.279008 NM_017696 ENSG00000111877 MCM9 C6orf61|MCMDC1|ODG4|dJ329L24.1|dJ329L24.3 minichromosome maintenance 9 homologous recombination repair factor protein-coding chr3-5057 chr3 41011319 41011529 + 9.78 0.000 Intergenic Intergenic -188081 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr5-7604 chr5 43648623 43648833 + 9.78 0.000 intron (NM_012343, intron 10 of 21) intron (NM_012343, intron 10 of 21) -45498 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr14-1118 chr14 77655116 77655326 + 9.78 0.000 Intergenic Intergenic -38454 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr3-6421 chr3 101066870 101067080 + 9.78 0.000 Intergenic Intergenic -73485 NM_001349330 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr15-4851 chr15 74798602 74798812 + 9.78 0.000 exon (NM_001127190, exon 4 of 14) exon (NM_001127190, exon 4 of 14) -9950 NR_039738 100616183 NR_039738 ENSG00000264386 MIR4513 - microRNA 4513 ncRNA chr3-4114 chr3 112929165 112929375 + 9.78 0.000 exon (NM_170780, exon 3 of 7) exon (NM_170780, exon 3 of 7) 45833 NM_138806 131450 Hs.309158 NM_138806 ENSG00000163606 CD200R1 CD200R|HCRTR2|MOX2R|OX2R CD200 receptor 1 protein-coding chr11-4743 chr11 83411193 83411403 + 9.78 0.000 Intergenic Intergenic -124891 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr22-1104 chr22 37052171 37052381 + 9.78 0.000 intron (NM_024681, intron 1 of 7) intron (NM_024681, intron 1 of 7) 540 NM_001282684 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr3-9035 chr3 22491406 22491616 + 9.78 0.000 Intergenic L2a|LINE|L2 534372 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr6-4747 chr6 69566268 69566478 + 9.78 0.000 Intergenic L1PA7|LINE|L1 230093 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr1-15095 chr1 99324000 99324210 + 9.78 0.000 Intergenic Intergenic 59813 NM_001166252 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chr10-3977 chr10 120644868 120645078 + 9.78 0.000 Intergenic Intergenic 47024 NR_103717 404216 Hs.196578 NM_001012711 ENSG00000177234 LINC01561 C10orf85 long intergenic non-protein coding RNA 1561 ncRNA chr22-1957 chr22 49760414 49760624 + 9.78 0.000 Intergenic L1M2a1|LINE|L1 63812 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr12-8052 chr12 115660016 115660226 + 9.78 0.000 Intergenic Intergenic 488533 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr5-8208 chr5 107556966 107557176 + 9.78 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 113866 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr3-9088 chr3 27862881 27863091 + 9.78 0.000 Intergenic Intergenic -28850 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr8-3519 chr8 117828673 117828883 + 9.78 0.000 intron (NM_000127, intron 4 of 10) intron (NM_000127, intron 4 of 10) 92135 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr19-2384 chr19 5075256 5075466 + 9.78 0.000 intron (NM_001370094, intron 7 of 10) intron (NM_001370094, intron 7 of 10) 106248 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr11-10247 chr11 101133450 101133660 + 9.78 0.000 intron (NR_073144, intron 3 of 4) L1MC3|LINE|L1 -3742 NM_000926 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr4-5790 chr4 80278704 80278914 + 9.78 0.000 intron (NM_004464, intron 2 of 2) intron (NM_004464, intron 2 of 2) 10544 NM_001291812 2250 Hs.37055 NM_004464 ENSG00000138675 FGF5 HBGF-5|Smag-82|TCMGLY fibroblast growth factor 5 protein-coding chr3-4040 chr3 72309407 72309617 + 9.78 0.000 Intergenic MER20|DNA|hAT-Charlie 137111 NM_012234 23429 Hs.7910 NM_012234 ENSG00000163602 RYBP AAP1|APAP-1|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding chr1-6177 chr1 201739586 201739796 + 9.78 0.000 promoter-TSS (NM_001167738) promoter-TSS (NM_001167738) -209 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr5-1373 chr5 79134051 79134261 + 9.78 0.000 Intergenic Intergenic 22347 NM_001713 635 Hs.80756 NM_001713 ENSG00000145692 BHMT BHMT1|HEL-S-61p betaine--homocysteine S-methyltransferase protein-coding chr10-8363 chr10 80473759 80473969 + 9.78 0.000 intron (NM_001351270, intron 2 of 9) intron (NM_001351270, intron 2 of 9) 5601 NM_001351271 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr19-6431 chr19 15526021 15526231 + 9.78 0.000 intron (NM_173483, intron 3 of 13) AluJo|SINE|Alu 17601 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr1-15510 chr1 156311232 156311442 + 9.78 0.000 intron (NM_001008800, intron 9 of 11) intron (NM_001008800, intron 9 of 11) -11700 NM_001004319 391104 Hs.532378 NM_001004319 ENSG00000189030 VHLL VHLP|VLP VHL like protein-coding chr8-4019 chr8 58641522 58641732 + 9.78 0.000 intron (NM_001144772, intron 2 of 30) L1MC5a|LINE|L1 17780 NM_001144772 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr1-15611 chr1 161769867 161770077 + 9.78 0.000 intron (NM_007348, intron 1 of 15) L1MC2|LINE|L1 3652 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chr11-2865 chr11 15146674 15146884 + 9.78 0.000 intron (NM_001042536, intron 1 of 12) L3|LINE|CR1 -2323 NM_001278314 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr8-2080 chr8 127737435 127737645 + 9.78 0.000 intron (NM_001354870, intron 1 of 2) CpG 1309 NM_002467 4609 Hs.202453 NM_002467 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc MYC proto-oncogene, bHLH transcription factor protein-coding chr22-2600 chr22 31217927 31218137 + 9.78 0.000 intron (NM_005569, intron 1 of 15) intron (NM_005569, intron 1 of 15) 5734 NM_005569 3985 Hs.474596 NM_005569 ENSG00000182541 LIMK2 - LIM domain kinase 2 protein-coding chr2-7015 chr2 148907526 148907736 + 9.78 0.000 intron (NM_004522, intron 1 of 25) intron (NM_004522, intron 1 of 25) 32404 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr4-2594 chr4 120918982 120919192 + 9.78 0.000 intron (NM_001300824, intron 1 of 13) L2a|LINE|L2 3779 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr11-7175 chr11 129853987 129854197 + 9.78 0.000 intron (NM_138788, intron 2 of 5) intron (NM_138788, intron 2 of 5) 38244 NM_138788 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr5-4150 chr5 92222980 92223190 + 9.78 0.000 Intergenic L1PA12|LINE|L1 -839768 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr12-3796 chr12 56834133 56834343 + 9.78 0.000 Intergenic MER50-int|LTR|ERV1 70914 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr4-2122 chr4 67945154 67945364 + 9.78 0.000 intron (NM_001114387, intron 2 of 9) intron (NM_001114387, intron 2 of 9) 18234 NM_182606 339967 Hs.450110 NM_182606 ENSG00000187054 TMPRSS11A ECRG1 transmembrane serine protease 11A protein-coding chr8-3351 chr8 41872622 41872832 + 9.78 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 24014 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr14-2088 chr14 71743436 71743646 + 9.78 0.000 Intergenic Intergenic 157243 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr16-4377 chr16 49543712 49543922 + 9.78 0.000 intron (NM_001271620, intron 5 of 7) MIRb|SINE|MIR -25232 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr3-4463 chr3 46697099 46697309 + 9.78 0.000 intron (NM_001370525, intron 2 of 4) MER21A|LTR|ERVL 3426 NM_001370525 259236 Hs.185777 NM_147196 ENSG00000181585 TMIE DFNB6 transmembrane inner ear protein-coding chr10-2567 chr10 70290684 70290894 + 9.78 0.000 Intergenic MER5B|DNA|hAT-Charlie -6785 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr12-4358 chr12 3337704 3337914 + 9.78 0.000 intron (NR_148995, intron 1 of 11) intron (NR_148995, intron 1 of 11) 28313 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr21-993 chr21 10802783 10802993 + 9.78 0.000 Intergenic ALR/Alpha|Satellite|centr 281374 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr16-5636 chr16 65138006 65138216 + 9.78 0.000 Intergenic Intergenic -16048 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr3-2626 chr3 192901427 192901637 + 9.66 0.000 intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) 16324 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr20-1803 chr20 62395113 62395323 + 9.66 0.000 intron (NM_031215, intron 3 of 9) intron (NM_031215, intron 3 of 9) 8115 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr20-1534 chr20 48932044 48932254 + 9.66 0.000 intron (NM_006420, intron 1 of 38) L2a|LINE|L2 10438 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr17-3146 chr17 47151079 47151289 + 9.66 0.000 intron (NM_001256, intron 9 of 18) intron (NM_001256, intron 9 of 18) 38111 NR_148340 996 Hs.463295 NM_001256 ENSG00000004897 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding chr5-8577 chr5 137497471 137497681 + 9.66 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 1750 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr1-14999 chr1 91622897 91623107 + 9.66 0.000 Intergenic L3|LINE|CR1 121894 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr2-12831 chr2 95402049 95402259 + 9.66 0.000 promoter-TSS (NM_016044) promoter-TSS (NM_016044) -554 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr7-4096 chr7 35544571 35544781 + 9.66 0.000 Intergenic Intergenic 150459 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding chr3-6060 chr3 50679112 50679322 + 9.66 0.000 intron (NM_004947, intron 1 of 52) AluJr|SINE|Alu 4137 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr2-4305 chr2 235140675 235140885 + 9.66 0.000 Intergenic Intergenic 113045 NM_001371306 chr2-3148 chr2 188902908 188903118 + 9.66 0.000 Intergenic Intergenic -71360 NM_000090 1281 Hs.443625 NM_000090 ENSG00000168542 COL3A1 EDS4A|EDSVASC|PMGEDSV collagen type III alpha 1 chain protein-coding chr11-3887 chr11 101245035 101245245 + 9.66 0.000 Intergenic HERVE_a-int|LTR|ERV1 -115327 NM_000926 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr22-2424 chr22 19136822 19137032 + 9.66 0.000 intron (NM_022719, intron 8 of 9) intron (NM_022719, intron 8 of 9) 5619 NM_053006 23617 Hs.694070 NM_053006 ENSG00000206203 TSSK2 DGS-G|SPOGA2|STK22B|TSK2 testis specific serine kinase 2 protein-coding chr2-9388 chr2 230910772 230910982 + 9.66 0.000 exon (NM_005683, exon 2 of 2) exon (NM_005683, exon 2 of 2) 14365 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr8-2101 chr8 137255297 137255507 + 9.66 0.000 Intergenic MIRb|SINE|MIR 158186 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr11-6799 chr11 90886221 90886431 + 9.66 0.000 intron (NR_104190, intron 6 of 6) LTR16C|LTR|ERVL -17124 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr16-4387 chr16 49817288 49817498 + 9.66 0.000 intron (NM_001271620, intron 1 of 7) intron (NM_001271620, intron 1 of 7) 5345 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr1-9223 chr1 22640852 22641062 + 9.66 0.000 Intergenic Intergenic -2676 NM_172369 714 Hs.467753 NM_172369 ENSG00000159189 C1QC C1Q-C|C1QG complement C1q C chain protein-coding chr3-10622 chr3 146217605 146217815 + 9.66 0.000 intron (NM_001128306, intron 3 of 6) intron (NM_001128306, intron 3 of 6) 32905 NM_001128305 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr10-4662 chr10 126955773 126955983 + 9.66 0.000 intron (NM_001290223, intron 1 of 51) intron (NM_001290223, intron 1 of 51) 50469 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr12-5234 chr12 108457265 108457475 + 9.66 0.000 Intergenic Intergenic 16319 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr20-2481 chr20 32866480 32866690 + 9.66 0.000 intron (NM_001143967, intron 2 of 26) intron (NM_001143967, intron 2 of 26) 7662 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr15-1621 chr15 85477732 85477942 + 9.66 0.000 intron (NM_007200, intron 1 of 36) intron (NM_007200, intron 1 of 36) 97234 NM_007200 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr2-6042 chr2 119586315 119586525 + 9.66 0.000 intron (NR_073132, intron 6 of 24) intron (NR_073132, intron 6 of 24) 41971 NM_001271049 200373 Hs.496753 NM_001029996 ENSG00000163075 CFAP221 FAP221|PCDP1 cilia and flagella associated protein 221 protein-coding chr6-6425 chr6 93841851 93842061 + 9.66 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 123653 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr10-4551 chr10 100643523 100643733 + 9.66 0.000 Intergenic MIR|SINE|MIR -91768 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr18-2098 chr18 50057412 50057622 + 9.66 0.000 intron (NM_001080467, intron 1 of 39) intron (NM_001080467, intron 1 of 39) 69046 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr2-7430 chr2 10527792 10528002 + 9.66 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 78169 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr1-8172 chr1 18240595 18240805 + 9.66 0.000 intron (NM_032880, intron 2 of 9) L3|LINE|CR1 132902 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr5-2673 chr5 36093634 36093844 + 9.66 0.000 Intergenic Intergenic -26857 NR_031764 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr20-2354 chr20 15185351 15185561 + 9.66 0.000 intron (NM_001351663, intron 5 of 17) intron (NM_001351663, intron 5 of 17) -11384 NM_001351664 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr7-6584 chr7 81142913 81143123 + 9.66 0.000 Intergenic L1M1|LINE|L1 -220629 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr22-1854 chr22 38448993 38449203 + 9.66 0.000 intron (NM_152868, intron 1 of 1) intron (NM_152868, intron 1 of 1) -5070 NM_004981 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr3-3697 chr3 162354484 162354694 + 9.66 0.000 Intergenic Intergenic 857781 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr14-2956 chr14 49706540 49706750 + 9.66 0.000 intron (NM_172193, intron 1 of 12) L1MA2|LINE|L1 13525 NM_172193 122773 Hs.509258 NM_172193 ENSG00000197776 KLHDC1 MST025 kelch domain containing 1 protein-coding chr10-7661 chr10 26902492 26902702 + 9.66 0.000 Intergenic AluY|SINE|Alu 39404 NR_026795 387644 Hs.529965 NR_026795 ENSG00000283709 FAM238C C10orf51|LINC00202|LINC00202-1|NCRNA00202|bB27G4.1 family with sequence similarity 238 member C ncRNA chr4-4975 chr4 132313248 132313458 + 9.66 0.000 Intergenic Intergenic -277736 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr5-4038 chr5 38725226 38725436 + 9.66 0.000 intron (NR_109951, intron 3 of 3) (TTTCT)n|Simple_repeat|Simple_repeat -5058 NR_104631 101926904 Hs.634191 NR_104631 ENSG00000249740 LINC01265 - long intergenic non-protein coding RNA 1265 ncRNA chr8-4177 chr8 80391090 80391300 + 9.66 0.000 Intergenic L2b|LINE|L2 -94398 NM_001277145 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr2-6638 chr2 241726437 241726647 + 9.66 0.000 3' UTR (NM_032329, exon 8 of 8) 3' UTR (NM_032329, exon 8 of 8) -8088 NM_001287249 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr10-8797 chr10 107406260 107406470 + 9.66 0.000 Intergenic Intergenic -241659 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr16-2319 chr16 28497363 28497573 + 9.66 0.000 exon (NM_018690, exon 2 of 4) exon (NM_018690, exon 2 of 4) 2825 NM_018690 55911 Hs.200333 NM_018690 ENSG00000184730 APOBR APOB100R|APOB48R apolipoprotein B receptor protein-coding chr20-4482 chr20 62880755 62880965 + 9.66 0.000 exon (NM_001193369, exon 16 of 16) exon (NM_001193369, exon 16 of 16) 2043 NR_145839 109623463 NR_145839 SNORA117 - small nucleolar RNA, H/ACA box 117 snoRNA chr9-3736 chr9 117462926 117463136 + 9.66 0.000 Intergenic Intergenic -47974 NM_014010 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding GL000216.2-10 GL000216.2 229 439 + 9.66 0.000 NA NA NA NA chr4-4617 chr4 79020817 79021027 + 9.66 0.000 intron (NR_038342, intron 2 of 5) L1PA3|LINE|L1 49174 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA chr11-5251 chr11 29282251 29282461 + 9.66 0.000 Intergenic Intergenic -312057 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr12-3353 chr12 92134938 92135148 + 9.66 0.000 intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 6670 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr1-7281 chr1 239951693 239951903 + 9.66 0.000 Intergenic Intergenic -51926 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr1-10413 chr1 157303839 157304049 + 9.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -165353 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr6-4249 chr6 7537644 7537854 + 9.66 0.000 Intergenic Intergenic -3922 NM_004415 1832 Hs.519873 NM_004415 ENSG00000096696 DSP DCWHKTA|DP desmoplakin protein-coding chrX-2755 chrX 129652701 129652911 + 9.66 0.000 intron (NM_017413, intron 1 of 2) intron (NM_017413, intron 1 of 2) 2150 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr2-13444 chr2 144135264 144135474 + 9.66 0.000 intron (NM_001354350, intron 6 of 14) intron (NM_001354350, intron 6 of 14) 76210 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr7-5386 chr7 32453301 32453511 + 9.66 0.000 Intergenic Intergenic 5088 NR_038454 100130673 Hs.609282 NR_038454 LOC100130673 - phosphoribosyl pyrophosphate synthetase 2 pseudogene pseudo chr14-2388 chr14 49230155 49230365 + 9.66 0.000 Intergenic Intergenic 356120 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chrX-3800 chrX 139427040 139427250 + 9.66 0.000 Intergenic MIRc|SINE|MIR -19674 NR_028597 6719 Hs.730315 NR_028597 SRD5A1P1 SRD5AP1 steroid 5 alpha-reductase 1 pseudogene 1 pseudo chr18-836 chr18 13026727 13026937 + 9.66 0.000 intron (NM_032142, intron 9 of 44) L1MB2|LINE|L1 35470 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr12-5328 chr12 114233775 114233985 + 9.66 0.000 Intergenic (GATA)n|Simple_repeat|Simple_repeat 7890 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr1-5976 chr1 37495754 37495964 + 9.66 0.000 intron (NR_073090, intron 8 of 8) intron (NR_073090, intron 8 of 8) 5135 NR_049844 100847010 NR_049844 ENSG00000263675 MIR5581 - microRNA 5581 ncRNA chr1-11028 chr1 222337018 222337228 + 9.66 0.000 Intergenic Intergenic 210981 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr6-4821 chr6 81820860 81821070 + 9.66 0.000 Intergenic Intergenic -6773 NR_126363 101928770 Hs.586239 NR_126363 ENSG00000224995 LINC01526 Lnc-FAM46A-1 long intergenic non-protein coding RNA 1526 ncRNA chr9-5856 chr9 130551278 130551488 + 9.66 0.000 Intergenic UCON84|Unknown|Unknown 28111 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr13-3823 chr13 47156082 47156292 + 9.66 0.000 Intergenic THE1B|LTR|ERVL-MaLR -259111 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr4-4099 chr4 5836150 5836360 + 9.66 0.000 intron (NM_001014809, intron 10 of 13) intron (NM_001014809, intron 10 of 13) 51558 NM_001288662 1400 Hs.135270 NM_001313 ENSG00000072832 CRMP1 CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 collapsin response mediator protein 1 protein-coding chr15-3258 chr15 75922357 75922567 + 9.66 0.000 intron (NM_012170, intron 5 of 5) L2c|LINE|L2 18584 NM_147188 26263 Hs.591115 NM_012170 ENSG00000167196 FBXO22 FBX22|FISTC1 F-box protein 22 protein-coding chr1-10302 chr1 150752986 150753196 + 9.66 0.000 intron (NM_001199739, intron 3 of 6) AluJb|SINE|Alu 12687 NM_001199739 1520 Hs.181301 NM_004079 ENSG00000163131 CTSS - cathepsin S protein-coding chr10-7804 chr10 37805879 37806089 + 9.66 0.000 intron (NM_001352493, intron 5 of 6) L1M4|LINE|L1 -10809 NR_051997 100419868 Hs.741719 NR_051997 ZNF33BP1 - zinc finger protein 33B pseudogene 1 pseudo chr17-4645 chr17 15654021 15654231 + 9.66 0.000 intron (NM_001348119, intron 6 of 11) intron (NM_001348119, intron 6 of 11) 28825 NM_006470 10626 Hs.123534 NM_006470 ENSG00000221926 TRIM16 EBBP tripartite motif containing 16 protein-coding chr9-3320 chr9 91361007 91361217 + 9.66 0.000 intron (NM_001351431, intron 1 of 10) intron (NM_001351431, intron 1 of 10) 812 NM_001698 549 Hs.175905 NM_001698 ENSG00000148090 AUH - AU RNA binding methylglutaconyl-CoA hydratase protein-coding chr2-13621 chr2 159411858 159412068 + 9.66 0.000 intron (NM_001329858, intron 13 of 36) intron (NM_001329858, intron 13 of 36) -125260 NM_001330276 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr2-6297 chr2 61838498 61838708 + 9.66 0.000 exon (NM_001201543, exon 4 of 7) exon (NM_001201543, exon 4 of 7) 15457 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr11-4621 chr11 11327320 11327530 + 9.66 0.000 intron (NM_001363464, intron 7 of 9) intron (NM_001363464, intron 7 of 9) 25825 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr1-11823 chr1 30660004 30660214 + 9.66 0.000 Intergenic Intergenic -58663 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr3-3298 chr3 150097438 150097648 + 9.66 0.000 intron (NR_136187, intron 1 of 2) intron (NR_136187, intron 1 of 2) 1100 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr10-6260 chr10 77603583 77603793 + 9.66 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 34120 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr2-9087 chr2 203718361 203718571 + 9.66 0.000 intron (NM_001243078, intron 1 of 2) intron (NM_001243078, intron 1 of 2) 11827 NM_001243077 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr19-2337 chr19 44588623 44588833 + 9.66 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -24835 NM_001205280 147710 Hs.512509 NM_001205280 ENSG00000216588 IGSF23 - immunoglobulin superfamily member 23 protein-coding chr3-3913 chr3 47504157 47504367 + 9.66 0.000 intron (NM_001031703, intron 4 of 6) intron (NM_001031703, intron 4 of 6) 9083 NM_001363957 54859 Hs.311100 NM_017713 ENSG00000163832 ELP6 C3orf75|TMEM103 elongator acetyltransferase complex subunit 6 protein-coding chr4-5108 chr4 148922706 148922916 + 9.66 0.000 Intergenic Intergenic 19567 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr13-1166 chr13 36432828 36433038 + 9.66 0.000 intron (NM_001111045, intron 1 of 8) intron (NM_001111045, intron 1 of 8) 438 NM_003914 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr1-6592 chr1 36755402 36755612 + 9.66 0.000 Intergenic Intergenic -272193 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr3-2813 chr3 11616101 11616311 + 9.66 0.000 intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) -11625 NM_001284391 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr10-7291 chr10 130901958 130902168 + 9.66 0.000 Intergenic Intergenic 60605 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr3-7111 chr3 182959827 182960037 + 9.66 0.000 intron (NM_020640, intron 4 of 6) MSTB2|LTR|ERVL-MaLR 20606 NM_020640 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr5-1500 chr5 131216416 131216626 + 9.66 0.000 Intergenic AluJo|SINE|Alu 45577 NM_001293735 90624 Hs.115467 NM_181705 ENSG00000186687 LYRM7 C5orf31|MC3DN8|MZM1L LYR motif containing 7 protein-coding chr11-3848 chr11 72237472 72237682 + 9.66 0.000 exon (NM_001567, exon 26 of 28) exon (NM_001567, exon 26 of 28) 6599 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr16-5610 chr16 57354236 57354446 + 9.66 0.000 Intergenic AluJb|SINE|Alu -4442 NM_002990 6367 Hs.534347 NM_002990 ENSG00000102962 CCL22 A-152E5.1|ABCD-1|DC/B-CK|MDC|SCYA22|STCP-1 C-C motif chemokine ligand 22 protein-coding chrX-2167 chrX 38512545 38512755 + 9.66 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -48828 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr17-3406 chr17 4341176 4341386 + 9.66 0.000 intron (NM_003342, intron 1 of 5) MIR|SINE|MIR 25393 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr10-5162 chr10 56164796 56165006 + 9.66 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 196358 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr20-2694 chr20 46959257 46959467 + 9.66 0.000 intron (NM_172110, intron 1 of 13) MER20|DNA|hAT-Charlie 64519 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr3-2073 chr3 185773775 185773985 + 9.66 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) -5976 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr16-4739 chr16 84446693 84446903 + 9.66 0.000 intron (NM_001291454, intron 13 of 23) intron (NM_001291454, intron 13 of 23) 20563 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr10-8450 chr10 86566174 86566384 + 9.66 0.000 Intergenic HERVH-int|LTR|ERV1 -44487 NM_015045 23063 Hs.203099 NM_015045 ENSG00000062650 WAPL FOE|KIAA0261|WAPAL WAPL cohesin release factor protein-coding chr13-2876 chr13 111139927 111140137 + 9.66 0.000 intron (NM_001113512, intron 1 of 17) intron (NM_001113512, intron 1 of 17) 8533 NR_046516 100874226 Hs.577834 NR_046516 ARHGEF7-AS1 - ARHGEF7 antisense RNA 1 ncRNA chr17-5964 chr17 76796459 76796669 + 9.66 0.000 Intergenic MER21C|LTR|ERVL -2480 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chrX-3850 chrX 153740397 153740607 + 9.66 0.000 intron (NM_000033, intron 6 of 9) intron (NM_000033, intron 6 of 9) 15646 NM_000033 215 Hs.159546 NM_000033 ENSG00000101986 ABCD1 ABC42|ALD|ALDP|AMN ATP binding cassette subfamily D member 1 protein-coding chr11-4160 chr11 47506980 47507190 + 9.66 0.000 intron (NM_001330272, intron 1 of 15) intron (NM_001330272, intron 1 of 15) -12564 NM_198700 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr16-4252 chr16 22769692 22769902 + 9.66 0.000 Intergenic Intergenic -44365 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr1-10905 chr1 208176984 208177194 + 9.66 0.000 intron (NM_025179, intron 3 of 31) L2c|LINE|L2 67295 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr10-3244 chr10 118473787 118473997 + 9.66 0.000 Intergenic Intergenic 116784 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr2-8712 chr2 156308935 156309145 + 9.66 0.000 Intergenic MIR|SINE|MIR 23681 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr15-1925 chr15 89264940 89265150 + 9.66 0.000 intron (NM_001113378, intron 9 of 37) L2a|LINE|L2 21066 NM_018193 55215 Hs.513126 NM_018193 ENSG00000140525 FANCI KIAA1794 FA complementation group I protein-coding chr14-3025 chr14 55593961 55594171 + 9.66 0.000 intron (NM_004986, intron 1 of 41) L1MEi|LINE|L1 13859 NM_001079521 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding chr2-6556 chr2 218612772 218612982 + 9.66 0.000 intron (NM_032726, intron 1 of 15) intron (NM_032726, intron 1 of 15) 4978 NM_032726 84812 Hs.632528 NM_032726 ENSG00000115556 PLCD4 - phospholipase C delta 4 protein-coding chr13-2486 chr13 51835706 51835916 + 9.66 0.000 intron (NM_001351003, intron 2 of 4) intron (NM_001351003, intron 2 of 4) 9366 NM_001351003 283521 Hs.649896 NM_178515 ENSG00000281106 TMEM272 LINC00282|NCRNA00282 transmembrane protein 272 protein-coding chr6-3307 chr6 162488934 162489144 + 9.66 0.000 intron (NM_004562, intron 1 of 11) L2b|LINE|L2 -238093 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr14-2582 chr14 48150726 48150936 + 9.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -355817 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr9-3260 chr9 20315989 20316199 + 9.66 0.000 Intergenic Intergenic 95144 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr11-10067 chr11 84642574 84642784 + 9.66 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) 78263 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr7-8595 chr7 66847138 66847348 + 9.66 0.000 promoter-TSS (NR_135738) promoter-TSS (NR_135738) -207 NR_135738 101929580 Hs.571342 NR_135738 GTF2IP23 - general transcription factor IIi pseudogene 23 pseudo chr19-4891 chr19 40754538 40754748 + 9.66 0.000 intron (NM_004596, intron 1 of 5) L2c|LINE|L2 3440 NM_004596 6626 Hs.466775 NM_004596 ENSG00000077312 SNRPA Mud1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding chr17-7299 chr17 4113258 4113468 + 9.66 0.000 intron (NM_015113, intron 4 of 54) intron (NM_015113, intron 4 of 54) 29667 NM_015113 23140 Hs.277624 NM_015113 ENSG00000074755 ZZEF1 ZZZ4 zinc finger ZZ-type and EF-hand domain containing 1 protein-coding chr20-1281 chr20 48662036 48662246 + 9.66 0.000 intron (NM_020820, intron 15 of 39) intron (NM_020820, intron 15 of 39) 165858 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr4-2878 chr4 76197044 76197254 + 9.66 0.000 intron (NM_001204255, intron 1 of 8) MLT1B|LTR|ERVL-MaLR 16675 NM_001204255 950 Hs.349656 NM_005506 ENSG00000138760 SCARB2 AMRF|CD36L2|EPM4|HLGP85|LGP85|LIMP-2|LIMPII|SR-BII scavenger receptor class B member 2 protein-coding chr15-1678 chr15 47718322 47718532 + 9.66 0.000 promoter-TSS (NM_153619) promoter-TSS (NM_153619) -62 NM_153619 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr6-4279 chr6 12017958 12018168 + 9.66 0.000 intron (NM_002114, intron 2 of 8) LTR12C|LTR|ERV1 5751 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr14-856 chr14 24398970 24399180 + 9.66 0.000 promoter-TSS (NM_025081) promoter-TSS (NM_025081) 72 NM_025081 57523 Hs.288348 NM_025081 ENSG00000205978 NYNRIN CGIN1|KIAA1305 NYN domain and retroviral integrase containing protein-coding chr18-2833 chr18 6921447 6921657 + 9.66 0.000 Intergenic Intergenic 8317 NR_034100 400643 Hs.253920 NM_001103383 ENSG00000265933 LINC00668 - long intergenic non-protein coding RNA 668 ncRNA chr4-7309 chr4 54393618 54393828 + 9.66 0.000 Intergenic Intergenic 60831 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr7-9030 chr7 101561958 101562168 + 9.66 0.000 TTS (NR_103749) TTS (NR_103749) 6943 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr10-1737 chr10 120949006 120949216 + 9.66 0.000 Intergenic CpG 97749 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr17-7407 chr17 9003783 9003993 + 9.66 0.000 Intergenic CpG -17622 NM_004822 9423 Hs.660885 NM_004822 ENSG00000065320 NTN1 MRMV4|NTN1L netrin 1 protein-coding chr4-4181 chr4 10256510 10256720 + 9.66 0.000 Intergenic Intergenic -139816 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr6-6702 chr6 437658 437868 + 9.66 0.000 Intergenic L1MB3|LINE|L1 46011 NM_001195286 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chrX-3549 chrX 64634223 64634433 + 9.66 0.000 Intergenic L1PA3|LINE|L1 -238876 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding KI270736.1-11 KI270736.1 157709 157919 + 9.66 0.000 NA NA NA NA chr9-5140 chr9 37627297 37627507 + 9.66 0.000 intron (NM_001371224, intron 2 of 16) intron (NM_001371224, intron 2 of 16) -23552 NM_014907 22844 Hs.163990 NM_014907 ENSG00000070601 FRMPD1 FRMD2 FERM and PDZ domain containing 1 protein-coding chr13-3647 chr13 31521895 31522105 + 9.66 0.000 Intergenic MamRTE1|LINE|RTE-BovB -217526 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr4-4902 chr4 121997468 121997678 + 9.66 0.000 Intergenic Intergenic -45513 NM_001130698 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr15-2790 chr15 35365733 35365943 + 9.66 0.000 Intergenic Intergenic 6526 NR_037507 100500904 NR_037507 ENSG00000265102 MIR3942 - microRNA 3942 ncRNA chr6-4894 chr6 91936169 91936379 + 9.66 0.000 Intergenic Intergenic -245846 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr11-6133 chr11 40462125 40462335 + 9.66 0.000 intron (NM_020929, intron 2 of 4) intron (NM_020929, intron 2 of 4) -169100 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr3-5829 chr3 31294569 31294779 + 9.66 0.000 Intergenic Intergenic -132887 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr4-3487 chr4 135333128 135333338 + 9.66 0.000 Intergenic Intergenic -209674 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr16-1660 chr16 57268778 57268988 + 9.66 0.000 intron (NM_015993, intron 1 of 3) intron (NM_015993, intron 1 of 3) 15789 NM_015993 51090 Hs.632215 NM_015993 ENSG00000102934 PLLP PMLP|TM4SF11 plasmolipin protein-coding chr17-5800 chr17 63869548 63869758 + 9.66 0.000 Intergenic MER5B|DNA|hAT-Charlie 4076 NM_020991 1443 Hs.654515 NM_020991 ENSG00000213218 CSH2 CS-2|CSB|GHB1|PL|hCS-B chorionic somatomammotropin hormone 2 protein-coding chr4-3802 chr4 109158712 109158922 + 9.66 0.000 intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 143841 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr1-5891 chr1 5978229 5978439 + 9.66 0.000 exon (NM_015102, exon 3 of 30) exon (NM_015102, exon 3 of 30) 14091 NM_001291593 261734 Hs.462348 NM_015102 ENSG00000131697 NPHP4 POC10|SLSN4 nephrocystin 4 protein-coding chr10-8276 chr10 76428591 76428801 + 9.66 0.000 intron (NM_001305581, intron 6 of 6) intron (NM_001305581, intron 6 of 6) -459348 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr2-14489 chr2 226125672 226125882 + 9.66 0.000 Intergenic LTR40b|LTR|ERVL -17017 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr9-7483 chr9 29291988 29292198 + 9.66 0.000 Intergenic Intergenic -78492 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr5-7754 chr5 61122057 61122267 + 9.66 0.000 intron (NM_174889, intron 3 of 3) MLT2D|LTR|ERVL -40154 NR_109908 101928630 Hs.575209 NR_109908 SMIM15-AS1 CTC-436P18.1 SMIM15 antisense RNA 1 ncRNA chr16-3131 chr16 72664250 72664460 + 9.66 0.000 intron (NR_159372, intron 1 of 7) intron (NR_159372, intron 1 of 7) 615 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr2-3053 chr2 86372851 86373061 + 9.66 0.000 Intergenic LTR16|LTR|ERVL -34873 NM_001164730 65055 Hs.368884 NM_022912 ENSG00000068615 REEP1 C2orf23|HMN5B|SPG31|Yip2a receptor accessory protein 1 protein-coding chrX-5077 chrX 125485408 125485618 + 9.66 0.000 Intergenic L2a|LINE|L2 165642 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr16-2882 chr16 89668461 89668671 + 9.66 0.000 intron (NM_001271910, intron 2 of 2) intron (NM_001271910, intron 2 of 2) 10498 NR_073516 124045 Hs.655171 NM_153025 ENSG00000167523 SPATA33 C16orf55 spermatogenesis associated 33 protein-coding chr10-5090 chr10 46042495 46042705 + 9.66 0.000 intron (NM_138634, intron 1 of 2) L1M5|LINE|L1 3669 NM_138634 4477 Hs.255462 NM_002443 ENSG00000263639 MSMB HPC13|IGBF|MSP|MSPB|PN44|PRPS|PSP|PSP-94|PSP57|PSP94 microseminoprotein beta protein-coding chr2-9475 chr2 235487243 235487453 + 9.66 0.000 Intergenic Intergenic -6695 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr11-4280 chr11 66486774 66486984 + 9.66 0.000 intron (NM_130443, intron 4 of 17) MIR3|SINE|MIR 6445 NM_001256670 10072 Hs.502914 NM_005700 ENSG00000254986 DPP3 DPPIII dipeptidyl peptidase 3 protein-coding chr11-9199 chr11 37262155 37262365 + 9.66 0.000 Intergenic MIRb|SINE|MIR -663981 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr2-5401 chr2 108334474 108334684 + 9.66 0.000 intron (NR_037191, intron 3 of 3) intron (NR_037191, intron 3 of 3) 12341 NR_037191 151234 Hs.447681 NR_037191 ENSG00000237223 SULT1C2P1 SULT1C1P sulfotransferase family 1C member 2 pseudogene 1 pseudo chr10-2450 chr10 14074413 14074623 + 9.66 0.000 non-coding (NR_120638, exon 1 of 3) non-coding (NR_120638, exon 1 of 3) 234 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr16-2253 chr16 874402 874612 + 9.66 0.000 intron (NR_147885, intron 6 of 11) intron (NR_147885, intron 6 of 11) -46526 NR_110946 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr15-1612 chr15 82768808 82769018 + 9.66 0.000 exon (NM_001281806, exon 8 of 12) exon (NM_001281806, exon 8 of 12) 12968 NR_003011 677778 Hs.743895 NR_003011 ENSG00000277864 SCARNA15 ACA45 small Cajal body-specific RNA 15 ncRNA chr17-5117 chr17 6481577 6481787 + 9.66 0.000 intron (NM_031220, intron 6 of 19) L2c|LINE|L2 37227 NM_001195228 54478 Hs.592116 NM_019013 ENSG00000129195 PIMREG CATS|FAM64A|RCS1 PICALM interacting mitotic regulator protein-coding chr7-8617 chr7 68906978 68907188 + 9.66 0.000 Intergenic Intergenic 690541 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr10-5247 chr10 66555399 66555609 + 9.66 0.000 intron (NM_001127384, intron 10 of 17) MER53|DNA|hAT -370532 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr12-5143 chr12 100110410 100110620 + 9.66 0.000 intron (NM_001006947, intron 1 of 12) L2b|LINE|L2 32359 NM_015054 23074 Hs.572154 NM_015054 ENSG00000111647 UHRF1BP1L SHIP164 UHRF1 binding protein 1 like protein-coding chr9-4452 chr9 21903398 21903608 + 9.66 0.000 Intergenic Intergenic -63636 NR_024274 51198 Hs.721053 NM_016349 CDKN2A-DT C9orf53|CDKN2A-AS1|bA149I2.3 CDKN2A divergent transcript ncRNA chr11-6758 chr11 84105645 84105855 + 9.66 0.000 intron (NM_001142699, intron 9 of 27) intron (NM_001142699, intron 9 of 27) 167530 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr5-5328 chr5 128965076 128965286 + 9.66 0.000 promoter-TSS (NM_001317984) promoter-TSS (NM_001317984) 54 NM_014031 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr1-4310 chr1 34342787 34342997 + 9.66 0.000 Intergenic Intergenic 165985 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr6-5670 chr6 103489686 103489896 + 9.66 0.000 Intergenic SATR1|Satellite|Satellite 1369755 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr9-5755 chr9 127219073 127219283 + 9.66 0.000 3' UTR (NM_001366401, exon 17 of 17) 3' UTR (NM_001366401, exon 17 of 17) -44484 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr12-1325 chr12 58420696 58420906 + 9.66 0.000 Intergenic Intergenic -170901 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chrX-2570 chrX 102840808 102841018 + 9.66 0.000 intron (NR_146584, intron 11 of 18) intron (NR_146584, intron 11 of 18) 71760 NR_146592 100287765 Hs.556850 NR_038988 LINC00630 - long intergenic non-protein coding RNA 630 ncRNA chr8-2038 chr8 109597734 109597944 + 9.66 0.000 intron (NM_001099754, intron 3 of 6) intron (NM_001099754, intron 3 of 6) 5620 NM_001363032 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr16-4805 chr16 86089957 86090167 + 9.66 0.000 Intergenic Intergenic -106119 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr9-7554 chr9 35195644 35195854 + 9.66 0.000 intron (NM_006377, intron 1 of 38) intron (NM_006377, intron 1 of 38) 33740 NM_001330653 10497 Hs.493791 NM_006377 ENSG00000198722 UNC13B MUNC13|UNC13|Unc13h2 unc-13 homolog B protein-coding chr12-5280 chr12 110499271 110499481 + 9.66 0.000 intron (NR_104100, intron 1 of 4) intron (NR_104100, intron 1 of 4) 2735 NM_016226 51699 Hs.600114 NM_016226 ENSG00000111237 VPS29 DC15|DC7|PEP11 VPS29 retromer complex component protein-coding chr21-985 chr21 10134220 10134430 + 9.66 0.000 Intergenic Intergenic -279195 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding chr3-5346 chr3 136335832 136336042 + 9.66 0.000 TTS (NM_005862) TTS (NM_005862) 85597 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr3-10791 chr3 159593423 159593633 + 9.66 0.000 intron (NM_001197108, intron 1 of 6) MIR|SINE|MIR 175084 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr4-3599 chr4 6432112 6432322 + 9.66 0.000 intron (NM_001206994, intron 2 of 9) L2b|LINE|L2 -11099 NM_001206996 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr7-8232 chr7 34541206 34541416 + 9.66 0.000 intron (NR_033665, intron 2 of 3) L1PA8|LINE|L1 -116907 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr1-8036 chr1 234971452 234971662 + 9.66 0.000 Intergenic Intergenic -7558 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr17-2347 chr17 63985214 63985424 + 9.66 0.000 Intergenic Intergenic -12401 NM_000334 6329 Hs.46038 NM_000334 ENSG00000007314 SCN4A CMS16|HOKPP2|HYKPP|HYPP|NAC1A|Na(V)1.4|Nav1.4|SkM1 sodium voltage-gated channel alpha subunit 4 protein-coding chr5-5436 chr5 137842258 137842468 + 9.66 0.000 Intergenic L1PA17|LINE|L1 -25493 NM_006790 9499 Hs.84665 NM_006790 ENSG00000120729 MYOT LGMD1|LGMD1A|MFM3|TTID|TTOD myotilin protein-coding chrX-2438 chrX 79534760 79534970 + 9.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -167313 NM_001171581 9452 Hs.17109 NM_004867 ENSG00000078596 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding chr15-2842 chr15 40740211 40740421 + 9.66 0.000 intron (NM_001323894, intron 6 of 12) intron (NM_001323894, intron 6 of 12) 14938 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chr2-7934 chr2 60497568 60497778 + 9.66 0.000 intron (NM_138559, intron 2 of 4) MIRc|SINE|MIR 55825 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr2-7966 chr2 64134950 64135160 + 9.66 0.000 intron (NM_020651, intron 1 of 6) intron (NM_020651, intron 1 of 6) 9365 NM_020651 57162 Hs.7886 NM_020651 ENSG00000197329 PELI1 - pellino E3 ubiquitin protein ligase 1 protein-coding chr15-3641 chr15 81012077 81012287 + 9.66 0.000 Intergenic Intergenic 11259 NM_022566 59274 Hs.513071 NM_022566 ENSG00000140406 TLNRD1 MESDC1 talin rod domain containing 1 protein-coding chr6-4139 chr6 166640485 166640695 + 9.66 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -13339 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr22-3183 chr22 32809912 32810122 + 9.66 0.000 intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 9201 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr11-5489 chr11 79251058 79251268 + 9.66 0.000 intron (NM_001098816, intron 2 of 33) L1MEd|LINE|L1 150946 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr16-3036 chr16 50202898 50203108 + 9.66 0.000 intron (NM_001365324, intron 1 of 11) intron (NM_001365324, intron 1 of 11) 49522 NM_001365324 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr9-1432 chr9 133609137 133609347 + 9.66 0.000 Intergenic CpG -27121 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr5-4823 chr5 60257914 60258124 + 9.66 0.000 intron (NM_001364599, intron 1 of 16) intron (NM_001364599, intron 1 of 16) 114644 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr7-3416 chr7 139283903 139284113 + 9.66 0.000 exon (NM_173569, exon 15 of 18) exon (NM_173569, exon 15 of 18) 52771 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr3-7034 chr3 172687256 172687466 + 9.66 0.000 intron (NM_001146276, intron 1 of 4) intron (NM_001146276, intron 1 of 4) 23706 NM_001146276 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr1-5075 chr1 107721369 107721579 + 9.66 0.000 intron (NM_006113, intron 15 of 26) intron (NM_006113, intron 15 of 26) -32975 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr2-4722 chr2 237304804 237305014 + 9.66 0.000 Intergenic ERVL-E-int|LTR|ERVL 109255 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr6-3016 chr6 46983000 46983210 + 9.66 0.000 Intergenic L3|LINE|CR1 -28166 NM_015234 221395 Hs.362806 NM_015234 ENSG00000069122 ADGRF5 GPR116|KPG_001 adhesion G protein-coupled receptor F5 protein-coding chr4-3419 chr4 73978925 73979135 + 9.66 0.000 Intergenic Intergenic 2997 NM_002619 5196 Hs.81564 NM_002619 ENSG00000163737 PF4 CXCL4|PF-4|SCYB4 platelet factor 4 protein-coding chr7-4635 chr7 29182685 29182895 + 9.66 0.000 intron (NM_001371268, intron 1 of 9) intron (NM_001371268, intron 1 of 9) 7267 NM_001371267 chr9-5927 chr9 133576906 133577116 + 9.66 0.000 Intergenic Intergenic 3235 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr9-7762 chr9 76863540 76863750 + 9.66 0.000 intron (NM_001308048, intron 1 of 17) intron (NM_001308048, intron 1 of 17) 42442 NR_131751 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr4-6892 chr4 13701978 13702188 + 9.66 0.000 intron (NR_121681, intron 2 of 3) intron (NR_121681, intron 2 of 3) 46904 NR_121681 101929071 Hs.543714 NR_121681 ENSG00000250634 LINC01182 - long intergenic non-protein coding RNA 1182 ncRNA chr15-1272 chr15 89998315 89998525 + 9.66 0.000 Intergenic Intergenic -2904 NM_198526 374655 Hs.459311 NM_198526 ENSG00000140548 ZNF710 - zinc finger protein 710 protein-coding chr4-3321 chr4 693184 693394 + 9.66 0.000 Intergenic Intergenic -4138 NM_001294341 84179 Hs.567612 NM_032219 ENSG00000169026 SLC49A3 LP2561|MFSD7 solute carrier family 49 member 3 protein-coding chrX-2133 chrX 32280382 32280592 + 9.66 0.000 intron (NM_000109, intron 43 of 78) intron (NM_000109, intron 43 of 78) -125018 NM_004023 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr5-4944 chr5 76288610 76288820 + 9.66 0.000 intron (NM_014979, intron 6 of 12) Tigger19a|DNA|TcMar-Tigger -114570 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr3-3378 chr3 47865243 47865453 + 9.66 0.000 intron (NM_002375, intron 15 of 18) intron (NM_002375, intron 15 of 18) 15793 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr4-1531 chr4 138610130 138610340 + 9.66 0.000 Intergenic Intergenic 300524 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr9-4590 chr9 96176832 96177042 + 9.66 0.000 Intergenic L2a|LINE|L2 -60526 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr6-2184 chr6 35449600 35449810 + 9.66 0.000 Intergenic Intergenic -2656 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr3-3508 chr3 15519503 15519713 + 9.66 0.000 intron (NM_080539, intron 1 of 15) LTR33|LTR|ERVL 2098 NM_005677 8292 Hs.146735 NM_005677 ENSG00000206561 COLQ CMS5|EAD collagen like tail subunit of asymmetric acetylcholinesterase protein-coding chr6-4361 chr6 20373419 20373629 + 9.66 0.000 Intergenic Intergenic -28355 NM_001949 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chr5-3058 chr5 31537833 31538043 + 9.66 0.000 intron (NR_134298, intron 3 of 8) MLT1J|LTR|ERVL-MaLR 5637 NM_018356 55322 Hs.519246 NM_018356 ENSG00000082213 C5orf22 - chromosome 5 open reading frame 22 protein-coding chr11-6013 chr11 24413114 24413324 + 9.66 0.000 Intergenic Intergenic -83834 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chrX-2579 chrX 104193502 104193712 + 9.66 0.000 3' UTR (NM_207318, exon 6 of 6) 3' UTR (NM_207318, exon 6 of 6) 27154 NM_207318 139231 Hs.496535 NM_207318 ENSG00000123575 FAM199X CXorf39 family with sequence similarity 199, X-linked protein-coding chr9-7781 chr9 78215794 78216004 + 9.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -20176 NM_001330694 84131 Hs.187621 NM_032171 ENSG00000148019 CEP78 C9orf81|CRDHL|IP63 centrosomal protein 78 protein-coding chr7-2856 chr7 108632273 108632483 + 9.66 0.000 Intergenic MLT1M|LTR|ERVL-MaLR 62504 NM_012328 4189 Hs.732494 NM_012328 ENSG00000128590 DNAJB9 ERdj4|MDG-1|MDG1|MST049|MSTP049 DnaJ heat shock protein family (Hsp40) member B9 protein-coding chrX-3886 chrX 6178160 6178370 + 9.66 0.000 intron (NM_181332, intron 1 of 5) intron (NM_181332, intron 1 of 5) -48093 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr4-2795 chr4 26023472 26023682 + 9.66 0.000 Intergenic Intergenic 109385 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr4-2752 chr4 8383775 8383985 + 9.66 0.000 intron (NM_003501, intron 13 of 17) intron (NM_003501, intron 13 of 17) 56843 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr9-6427 chr9 72856025 72856235 + 9.66 0.000 Intergenic Intergenic 17979 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr7-5363 chr7 31027163 31027373 + 9.66 0.000 Intergenic Intergenic -25040 NM_001199636 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr3-8436 chr3 115784830 115785040 + 9.66 0.000 Intergenic Intergenic 120191 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr16-3251 chr16 87599999 87600209 + 9.66 0.000 Intergenic Intergenic -1731 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr12-4241 chr12 111919046 111919256 + 9.66 0.000 Intergenic AluSz|SINE|Alu 20088 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo chr3-10623 chr3 146248610 146248820 + 9.66 0.000 intron (NM_001128304, intron 2 of 10) L1ME3G|LINE|L1 1900 NM_001128305 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr7-2904 chr7 131136652 131136862 + 9.66 0.000 intron (NM_001145354, intron 1 of 18) intron (NM_001145354, intron 1 of 18) 26663 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr15-4967 chr15 79034866 79035076 + 9.66 0.000 intron (NM_001145648, intron 6 of 26) intron (NM_001145648, intron 6 of 26) -29311 NM_153815 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr11-4290 chr11 67059860 67060070 + 9.66 0.000 intron (NM_001300886, intron 1 of 2) intron (NM_001300886, intron 1 of 2) 3118 NM_001300886 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr14-3496 chr14 102790447 102790657 + 9.66 0.000 intron (NM_001199427, intron 1 of 7) THE1B|LTR|ERVL-MaLR 13073 NM_145726 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr4-2470 chr4 2139404 2139614 + 9.66 0.000 intron (NM_181808, intron 16 of 25) intron (NM_181808, intron 16 of 25) 80182 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr2-8732 chr2 159390432 159390642 + 9.66 0.000 intron (NM_001329858, intron 20 of 36) intron (NM_001329858, intron 20 of 36) -103834 NM_001330276 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr21-1830 chr21 40958228 40958438 + 9.66 0.000 Intergenic HERVH-int|LTR|ERV1 -111175 NM_001271534 1826 Hs.160418 NM_001389 ENSG00000171587 DSCAM CHD2|CHD2-42|CHD2-52 DS cell adhesion molecule protein-coding chr7-6013 chr7 105453642 105453852 + 9.66 0.000 Intergenic MER3|DNA|hAT-Charlie 54773 NM_001318163 54517 Hs.520619 NM_019042 ENSG00000091127 PUS7 IDDABS pseudouridine synthase 7 protein-coding chr10-4217 chr10 121018044 121018254 + 9.66 0.000 Intergenic L1MC1|LINE|L1 166787 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr14-3362 chr14 91359245 91359455 + 9.66 0.000 intron (NM_001080414, intron 4 of 29) AluY|SINE|Alu 58470 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr4-1411 chr4 6206656 6206866 + 9.66 0.000 intron (NR_037863, intron 1 of 3) AluJr|SINE|Alu 6028 NR_037863 285484 Hs.479068 NR_037863 LINC02495 - long intergenic non-protein coding RNA 2495 ncRNA chr15-1498 chr15 45796778 45796988 + 9.66 0.000 intron (NR_135680, intron 1 of 4) LTR33|LTR|ERVL 91688 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr4-8536 chr4 163758221 163758431 + 9.66 0.000 intron (NM_001166373, intron 3 of 7) intron (NM_001166373, intron 3 of 7) -144792 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr8-4030 chr8 59744650 59744860 + 9.66 0.000 Intergenic Intergenic 536645 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr10-8603 chr10 96985225 96985435 + 9.66 0.000 3' UTR (NM_001346516, exon 8 of 8) 3' UTR (NM_001346516, exon 8 of 8) -117426 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr8-5627 chr8 100788422 100788632 + 9.66 0.000 Intergenic Intergenic -66439 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr17-3288 chr17 45258036 45258246 + 9.66 0.000 intron (NM_152343, intron 1 of 4) intron (NM_152343, intron 1 of 4) -3939 NR_024435 100133991 Hs.668927 NR_024434 ENSG00000267278 MAP3K14-AS1 - MAP3K14 antisense RNA 1 ncRNA chr18-1883 chr18 28338165 28338375 + 9.66 0.000 Intergenic Intergenic -161140 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr6-2660 chr6 2396955 2397165 + 9.66 0.000 intron (NR_046229, intron 4 of 6) intron (NR_046229, intron 4 of 6) 151307 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr5-2018 chr5 39167223 39167433 + 9.66 0.000 intron (NM_001243093, intron 2 of 18) L1ME3G|LINE|L1 52235 NM_001465 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr10-5259 chr10 67783305 67783515 + 9.66 0.000 Intergenic Intergenic 54769 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr15-2239 chr15 100592782 100592992 + 9.66 0.000 intron (NR_148018, intron 1 of 6) intron (NR_148018, intron 1 of 6) 9297 NR_148017 55180 Hs.105633 NM_018148 ENSG00000140471 LINS1 LINS|MRT27|WINS1 lines homolog 1 protein-coding chr14-4569 chr14 47256203 47256413 + 9.66 0.000 intron (NM_001113498, intron 2 of 16) LTR85a|LTR|Gypsy? 86938 NR_103766 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chrX-2833 chrX 137356347 137356557 + 9.66 0.000 Intergenic L2c|LINE|L2 -209675 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr5-4330 chr5 157613302 157613512 + 9.66 0.000 Intergenic MIRb|SINE|MIR -37632 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr5-3411 chr5 147187439 147187649 + 9.66 0.000 intron (NR_147190, intron 2 of 3) intron (NR_147190, intron 2 of 3) 47315 NR_147190 105378217 Hs.162649 NR_147190 STK32A-AS1 - STK32A antisense RNA 1 ncRNA chr19-4268 chr19 267516 267726 + 9.66 0.000 Intergenic CpG 23518 NM_177543 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr22-1076 chr22 24236728 24236938 + 9.66 0.000 intron (NM_001099781, intron 1 of 11) L1MEg|LINE|L1 8309 NM_001099782 2687 Hs.437156 NM_004121 ENSG00000099998 GGT5 GGL|GGT 5|GGT-REL|GGTLA1 gamma-glutamyltransferase 5 protein-coding chrX-1354 chrX 144647123 144647333 + 9.66 0.000 Intergenic L1M1|LINE|L1 -600275 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr20-2771 chr20 52636032 52636242 + 9.66 0.000 intron (NR_110038, intron 2 of 2) MLT1D|LTR|ERVL-MaLR 15299 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA chr9-7222 chr9 926709 926919 + 9.66 0.000 intron (NM_001363767, intron 4 of 4) intron (NM_001363767, intron 4 of 4) -49841 NM_021240 58524 Hs.189174 NM_021240 ENSG00000064218 DMRT3 DMRTA3 doublesex and mab-3 related transcription factor 3 protein-coding chr4-4974 chr4 132108933 132109143 + 9.66 0.000 Intergenic Intergenic 344200 NR_125884 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr17-4191 chr17 17473034 17473244 + 9.66 0.000 Intergenic MIR|SINE|MIR -3861 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr10-4958 chr10 28471018 28471228 + 9.66 0.000 intron (NR_134496, intron 1 of 2) intron (NR_134496, intron 1 of 2) 24690 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chrX-3809 chrX 140907489 140907699 + 9.66 0.000 Intergenic Intergenic 18637 NR_031725 100302169 NR_031725 ENSG00000221081 MIR320D2 MIR320D-2|MIRN320D2|hsa-mir-320d-2|mir-320d-2 microRNA 320d-2 ncRNA chr11-6959 chr11 113776331 113776541 + 9.66 0.000 Intergenic Intergenic -2744 NM_004724 9183 Hs.503886 NM_004724 ENSG00000086827 ZW10 HZW10|KNTC1AP zw10 kinetochore protein protein-coding chr16-3605 chr16 81542593 81542803 + 9.66 0.000 intron (NM_030629, intron 1 of 20) MLT1A|LTR|ERVL-MaLR 8796 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr10-2204 chr10 35783444 35783654 + 9.66 0.000 intron (NR_110138, intron 1 of 2) intron (NR_110138, intron 1 of 2) 5247 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr14-4648 chr14 54660871 54661081 + 9.66 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 93364 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr9-3658 chr9 95250521 95250731 + 9.66 0.000 intron (NM_001243744, intron 1 of 13) L2|LINE|L2 66628 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr1-7000 chr1 168654533 168654743 + 9.66 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 74568 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr14-2468 chr14 88682330 88682540 + 9.66 0.000 intron (NM_183387, intron 20 of 42) L1M4b|LINE|L1 88015 NM_207662 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr4-5949 chr4 157684997 157685207 + 9.66 0.000 Intergenic LTR104_Mam|LTR|Gypsy 112612 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr11-5159 chr11 3200846 3201056 + 9.66 0.000 Intergenic Intergenic -17381 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr5-4879 chr5 66438943 66439153 + 9.66 0.000 Intergenic AluSp|SINE|Alu 72556 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr13-2279 chr13 28574760 28574970 + 9.66 0.000 Intergenic Intergenic -79737 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr21-372 chr21 10713401 10713611 + 9.66 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 191992 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chrX-1867 chrX 119148650 119148860 + 9.66 0.000 intron (NM_020721, intron 1 of 13) intron (NM_020721, intron 1 of 13) 1824 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr5-4231 chr5 133041916 133042126 + 9.66 0.000 Intergenic AluJb|SINE|Alu -9992 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr4-4697 chr4 87067655 87067865 + 9.66 0.000 intron (NM_005935, intron 3 of 19) intron (NM_005935, intron 3 of 19) 60759 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr1-8606 chr1 187850793 187851003 + 9.66 0.000 Intergenic LTR12C|LTR|ERV1 407270 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr5-3797 chr5 79803212 79803422 + 9.66 0.000 Intergenic LTR108d_Mam|LTR|ERVL 113481 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr18-932 chr18 76489581 76489791 + 9.66 0.000 intron (NM_014643, intron 1 of 6) intron (NM_014643, intron 1 of 6) -1966 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr2-7563 chr2 24380981 24381191 + 9.66 0.000 Intergenic MER31B|LTR|ERV1 -20550 NM_001348184 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr3-5942 chr3 45257776 45257986 + 9.66 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -31594 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr7-7363 chr7 56163378 56163588 + 9.66 0.000 Intergenic Intergenic -47066 NM_001145712 389493 Hs.177948 NM_001145712 ENSG00000185290 NUPR2 NUPR1L nuclear protein 2, transcriptional regulator protein-coding chr19-3717 chr19 41812146 41812356 + 9.66 0.000 TTS (NM_001277163) TTS (NM_001277163) 15664 NR_102333 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr17-5644 chr17 49908568 49908778 + 9.66 0.000 Intergenic Intergenic -60517 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr17-7269 chr17 2904105 2904315 + 9.66 0.000 intron (NM_001330058, intron 2 of 24) intron (NM_001330058, intron 2 of 24) 61685 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr4-4495 chr4 57943741 57943951 + 9.66 0.000 Intergenic Intergenic 517974 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr1-10994 chr1 217311878 217312088 + 9.66 0.000 Intergenic ERVL-B4-int|LTR|ERVL -174281 NM_001350124 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr22-2466 chr22 20523676 20523886 + 9.66 0.000 intron (NM_001293237, intron 1 of 16) intron (NM_001293237, intron 1 of 16) 15734 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chrX-1277 chrX 109858016 109858226 + 9.66 0.000 Intergenic Intergenic -12280 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr1-5104 chr1 121201488 121201698 + 9.66 0.000 intron (NM_001271872, intron 2 of 9) intron (NM_001271872, intron 2 of 9) 16618 NM_001329984 653464 Hs.497575 NM_001271872 ENSG00000171943 SRGAP2C SRGAP2P1 SLIT-ROBO Rho GTPase activating protein 2C protein-coding chr11-6877 chr11 102346044 102346254 + 9.66 0.000 Intergenic Intergenic -1033 NM_001166 329 Hs.696238 NM_001166 ENSG00000110330 BIRC2 API1|HIAP2|Hiap-2|MIHB|RNF48|c-IAP1|cIAP1 baculoviral IAP repeat containing 2 protein-coding chr19-1634 chr19 924828 925038 + 9.66 0.000 Intergenic CpG -1102 NM_005224 1820 Hs.501296 NM_005224 ENSG00000116017 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT-rich interaction domain 3A protein-coding chr9-2684 chr9 72443374 72443584 + 9.66 0.000 Intergenic Intergenic -78271 NM_001102420 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr11-6089 chr11 34155476 34155686 + 9.66 0.000 intron (NM_145804, intron 14 of 16) intron (NM_145804, intron 14 of 16) 49952 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr5-5295 chr5 125696662 125696872 + 9.66 0.000 Intergenic Intergenic 203506 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr11-5278 chr11 35584453 35584663 + 9.66 0.000 Intergenic Intergenic -33902 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr18-3019 chr18 26156558 26156768 + 9.66 0.000 intron (NM_144662, intron 3 of 6) (TA)n|Simple_repeat|Simple_repeat 22794 NM_001308188 143471 Hs.464813 NM_144662 ENSG00000154611 PSMA8 PSMA7L proteasome subunit alpha 8 protein-coding chr9-5212 chr9 74891224 74891434 + 9.66 0.000 Intergenic L1M1|LINE|L1 -3408 NM_017662 140803 Hs.272225 NM_017662 ENSG00000119121 TRPM6 CHAK2|HMGX|HOMG|HOMG1|HSH transient receptor potential cation channel subfamily M member 6 protein-coding chrX-1683 chrX 7188131 7188341 + 9.66 0.000 intron (NM_001320751, intron 2 of 11) intron (NM_001320751, intron 2 of 11) -31220 NM_000351 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr2-8207 chr2 95264853 95265063 + 9.66 0.000 Intergenic Intergenic -9491 NM_001165977 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding chr6-5925 chr6 64811076 64811286 + 9.66 0.000 intron (NM_001292009, intron 22 of 43) intron (NM_001292009, intron 22 of 43) -490237 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr20-3664 chr20 11419210 11419420 + 9.66 0.000 Intergenic L1MC3|LINE|L1 -145932 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr11-6854 chr11 98733057 98733267 + 9.66 0.000 Intergenic LTR28|LTR|ERV1 -287787 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr10-3154 chr10 72834271 72834481 + 9.66 0.000 non-coding (NR_073062, exon 4 of 10) non-coding (NR_073062, exon 4 of 10) -59363 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr9-8857 chr9 135822160 135822370 + 9.66 0.000 exon (NM_015447, exon 11 of 17) exon (NM_015447, exon 11 of 17) 85281 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr1-16151 chr1 205659862 205660072 + 9.66 0.000 intron (NM_033102, intron 4 of 4) intron (NM_033102, intron 4 of 4) 20542 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chrX-3515 chrX 46704420 46704630 + 9.66 0.000 intron (NM_001257291, intron 1 of 16) intron (NM_001257291, intron 1 of 16) 54593 NM_001257291 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr8-6843 chr8 98545723 98545933 + 9.66 0.000 intron (NM_006281, intron 9 of 10) intron (NM_006281, intron 9 of 10) 118870 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr9-5547 chr9 109521271 109521481 + 9.66 0.000 Intergenic AluJb|SINE|Alu -9831 NR_037493 100500898 NR_037493 ENSG00000263861 MIR3927 - microRNA 3927 ncRNA chr7-3325 chr7 69002576 69002786 + 9.66 0.000 Intergenic LTR26|LTR|ERV1 594943 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr3-3673 chr3 146068866 146069076 + 9.66 0.000 TTS (NM_000935) TTS (NM_000935) 214 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr13-3138 chr13 87348083 87348293 + 9.66 0.000 Intergenic Intergenic 270552 NR_039722 100616182 NR_039722 ENSG00000266052 MIR4500 - microRNA 4500 ncRNA chr13-1003 chr13 113438028 113438238 + 9.66 0.000 intron (NM_199162, intron 2 of 6) L1ME1|LINE|L1 11025 NM_199162 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding chr1-7557 chr1 201763638 201763848 + 9.66 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 23843 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr9-4850 chr9 694376 694586 + 9.66 0.000 intron (NM_001354337, intron 1 of 10) intron (NM_001354337, intron 1 of 10) 1142 NM_001354337 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr4-2837 chr4 47413675 47413885 + 9.66 0.000 intron (NM_000812, intron 8 of 8) intron (NM_000812, intron 8 of 8) 49922 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chr12-2539 chr12 100959478 100959688 + 9.66 0.000 intron (NM_001286616, intron 4 of 26) L2c|LINE|L2 57937 NM_001286616 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr6-8535 chr6 160566158 160566368 + 9.66 0.000 intron (NM_005577, intron 28 of 38) L1PA5|LINE|L1 -55139 NR_028092 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr3-6424 chr3 101376718 101376928 + 9.66 0.000 intron (NM_001282803, intron 3 of 20) intron (NM_001282803, intron 3 of 20) -56248 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr2-7596 chr2 25823604 25823814 + 9.66 0.000 intron (NM_018263, intron 2 of 11) intron (NM_018263, intron 2 of 11) 7192 NM_001369346 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr7-3015 chr7 66465414 66465624 + 9.66 0.000 Intergenic MER68|LTR|ERVL -28113 NR_134573 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr4-3862 chr4 132472634 132472844 + 9.66 0.000 Intergenic L1MC3|LINE|L1 -118350 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr12-4157 chr12 84412228 84412438 + 9.66 0.000 Intergenic Intergenic 500466 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr8-2403 chr8 66612461 66612671 + 9.66 0.000 intron (NM_001294282, intron 1 of 14) CpG 652 NM_001144755 4603 Hs.445898 NM_001080416 ENSG00000185697 MYBL1 A-MYB|AMYB MYB proto-oncogene like 1 protein-coding chr17-2317 chr17 47181847 47182057 + 9.66 0.000 intron (NM_001256, intron 1 of 18) L2b|LINE|L2 7343 NR_148340 996 Hs.463295 NM_001256 ENSG00000004897 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding chr6-4675 chr6 53201557 53201767 + 9.66 0.000 Intergenic MER39B|LTR|ERV1 -52821 NM_003643 8521 Hs.23589 NM_003643 ENSG00000137270 GCM1 GCMA|hGCMa glial cells missing transcription factor 1 protein-coding chr22-1178 chr22 38339079 38339289 + 9.66 0.000 intron (NM_001289912, intron 4 of 14) intron (NM_001289912, intron 4 of 14) -21100 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr8-3111 chr8 42752920 42753130 + 9.66 0.000 3' UTR (NM_001199279, exon 5 of 5) 3' UTR (NM_001199279, exon 5 of 5) 15761 NM_004198 8973 Hs.103128 NM_004198 ENSG00000147434 CHRNA6 CHNRA6 cholinergic receptor nicotinic alpha 6 subunit protein-coding chr13-2445 chr13 48646770 48646980 + 9.66 0.000 Intergenic Intergenic -7054 NM_001308465 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr12-4645 chr12 44913949 44914159 + 9.66 0.000 promoter-TSS (NM_001145110) promoter-TSS (NM_001145110) -126 NM_001145110 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr3-8051 chr3 2819981 2820191 + 9.66 0.000 intron (NM_175607, intron 7 of 24) MER21C|LTR|ERVL -72129 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr14-2848 chr14 29072614 29072824 + 9.66 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -286932 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr19-4042 chr19 5588590 5588800 + 9.66 0.000 intron (NM_014649, intron 18 of 20) L1MB7|LINE|L1 -20661 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr11-6997 chr11 117096212 117096422 + 9.66 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 2111 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr3-7769 chr3 70242896 70243106 + 9.66 0.000 intron (NM_001364676, intron 2 of 4) intron (NM_001364676, intron 2 of 4) 69637 NM_001364677 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr4-4663 chr4 83539110 83539320 + 9.66 0.000 intron (NM_001256421, intron 2 of 12) intron (NM_001256421, intron 2 of 12) 3107 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr3-4736 chr3 71982529 71982739 + 9.66 0.000 Intergenic HERVL-int|LTR|ERVL 117821 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr5-2381 chr5 89294002 89294212 + 9.66 0.000 intron (NR_136219, intron 7 of 9) intron (NR_136219, intron 7 of 9) -390002 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr11-7291 chr11 44426277 44426487 + 9.66 0.000 Intergenic Intergenic -116243 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr11-9760 chr11 69230492 69230702 + 9.66 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -59035 NR_104161 338694 Hs.564235 NR_104161 ENSG00000261070 LOC338694 - uncharacterized LOC338694 ncRNA chr15-1727 chr15 27233450 27233660 + 9.66 0.000 intron (NM_001270873, intron 3 of 5) MLT1A0|LTR|ERVL-MaLR -72236 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr13-4228 chr13 95004251 95004461 + 9.66 0.000 Intergenic MER115|DNA|hAT-Tip100 44315 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr9-7122 chr9 131099908 131100118 + 9.66 0.000 intron (NM_001185096, intron 2 of 5) AluSx1|SINE|Alu 3482 NM_031426 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr16-6182 chr16 25836967 25837177 + 9.66 0.000 intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) 145113 NM_006040 9951 Hs.655275 NM_006040 ENSG00000182601 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate-glucosamine 3-sulfotransferase 4 protein-coding chr3-6458 chr3 106178062 106178272 + 9.66 0.000 Intergenic MLT2A2|LTR|ERVL -308766 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr9-4385 chr9 135680909 135681119 + 9.66 0.000 Intergenic MER72|LTR|ERV1 17692 NM_001001676 392399 Hs.532679 NM_001001676 ENSG00000148386 LCN9 HEL129 lipocalin 9 protein-coding chr6-8370 chr6 149248363 149248573 + 9.66 0.000 intron (NR_149096, intron 1 of 2) GA-rich|Low_complexity|Low_complexity 9083 NR_149096 105378049 Hs.615624 NR_149096 ENSG00000225924 TAB2-AS1 - TAB2 antisense RNA 1 ncRNA chr20-1972 chr20 37944416 37944626 + 9.66 0.000 3' UTR (NM_080607, exon 4 of 4) 3' UTR (NM_080607, exon 4 of 4) 41394 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr3-7161 chr3 186414042 186414252 + 9.66 0.000 Intergenic Intergenic -26198 NR_151709 107986164 Hs.131227 NR_151708 ENSG00000234548 LINC02020 - long intergenic non-protein coding RNA 2020 ncRNA chr2-8405 chr2 115858335 115858545 + 9.66 0.000 Intergenic L1MA4|LINE|L1 514625 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr2-5036 chr2 237223431 237223641 + 9.66 0.000 Intergenic Intergenic 137647 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr12-4410 chr12 6823288 6823498 + 9.66 0.000 intron (NM_019858, intron 1 of 4) intron (NM_019858, intron 1 of 4) 1572 NM_014449 27239 Hs.631654 NM_014449 ENSG00000250510 GPR162 A-2|GRCA G protein-coupled receptor 162 protein-coding chr6-4537 chr6 40190501 40190711 + 9.66 0.000 Intergenic LTR33|LTR|ERVL 165400 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr8-2875 chr8 140451259 140451469 + 9.66 0.000 exon (NM_031466, exon 2 of 23) exon (NM_031466, exon 2 of 23) 6380 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr14-2477 chr14 95914300 95914510 + 9.66 0.000 intron (NR_132398, intron 2 of 2) intron (NR_132398, intron 2 of 2) 37633 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr12-6911 chr12 23846331 23846541 + 9.66 0.000 intron (NM_001330785, intron 2 of 14) intron (NM_001330785, intron 2 of 14) 103234 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr16-4902 chr16 89104516 89104726 + 9.66 0.000 intron (NR_104293, intron 4 of 10) intron (NR_104293, intron 4 of 10) 10769 NR_147929 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr3-7546 chr3 186931906 186932116 + 9.66 0.000 intron (NM_173216, intron 1 of 7) intron (NM_173216, intron 1 of 7) 1485 NM_173217 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr10-4594 chr10 112649572 112649782 + 9.66 0.000 intron (NM_001365712, intron 6 of 8) Tigger3b|DNA|TcMar-Tigger 15507 NR_036177 100422909 NR_036177 ENSG00000264763 MIR4295 - microRNA 4295 ncRNA chr7-9593 chr7 148077474 148077684 + 9.66 0.000 intron (NM_014141, intron 14 of 22) intron (NM_014141, intron 14 of 22) 405900 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr8-4337 chr8 100134916 100135126 + 9.66 0.000 intron (NR_036491, intron 3 of 4) HAL1|LINE|L1 10796 NR_036491 286151 Hs.339577 NM_001029860 ENSG00000156509 FBXO43 EMI2|ERP1|FBX43 F-box protein 43 protein-coding chr2-4010 chr2 99399509 99399719 + 9.66 0.000 TTS (NM_016316) TTS (NM_016316) 62225 NM_015904 9669 Hs.158688 NM_015904 ENSG00000158417 EIF5B IF2 eukaryotic translation initiation factor 5B protein-coding chr19-2779 chr19 45253483 45253693 + 9.66 0.000 intron (NM_001199867, intron 1 of 16) MIRb|SINE|MIR 2317 NM_001199867 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr12-2906 chr12 52560371 52560581 + 9.66 0.000 Intergenic Intergenic -7331 NM_033448 112802 Hs.660007 NM_033448 ENSG00000139648 KRT71 HYPT13|K6IRS1|KRT6IRS|KRT6IRS1 keratin 71 protein-coding chr21-437 chr21 34335298 34335508 + 9.66 0.000 Intergenic Intergenic -28621 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr8-3901 chr8 39892066 39892276 + 9.66 0.000 Intergenic Intergenic -21720 NM_002164 3620 Hs.840 NM_002164 ENSG00000131203 IDO1 IDO|IDO-1|INDO indoleamine 2,3-dioxygenase 1 protein-coding chr5-4145 chr5 90756772 90756982 + 9.66 0.000 intron (NR_003149, intron 56 of 89) intron (NR_003149, intron 56 of 89) 198080 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr9-5435 chr9 97186431 97186641 + 9.66 0.000 intron (NR_136286, intron 9 of 17) L2c|LINE|L2 -51890 NR_036526 100499484 Hs.435629 NR_036526 ENSG00000254876 SUGT1P4-STRA6LP - SUGT1P4-STRA6LP readthrough pseudo chrX-1844 chrX 107993648 107993858 + 9.66 0.000 Intergenic Intergenic -11383 NM_031273 56156 Hs.333130 NM_031273 ENSG00000170925 TEX13B TGC3B|TSGA5 testis expressed 13B protein-coding chr3-9795 chr3 72907294 72907504 + 9.66 0.000 intron (NM_001080393, intron 1 of 6) intron (NM_001080393, intron 1 of 6) 19353 NM_001080393 727936 Hs.710275 NM_001080393 ENSG00000172986 GXYLT2 GLT8D4 glucoside xylosyltransferase 2 protein-coding chr2-5301 chr2 70715066 70715276 + 9.66 0.000 intron (NM_017482, intron 1 of 12) intron (NM_017482, intron 1 of 12) 52544 NM_001185054 119 Hs.66187 NM_001617 ENSG00000075340 ADD2 ADDB adducin 2 protein-coding chr15-1950 chr15 33506878 33507088 + 9.66 0.000 intron (NM_001243996, intron 3 of 102) intron (NM_001243996, intron 3 of 102) 196016 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr21-1166 chr21 42275081 42275291 + 9.66 0.000 intron (NM_207627, intron 5 of 15) intron (NM_207627, intron 5 of 15) 40410 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr19-4738 chr19 23394374 23394584 + 9.66 0.000 intron (NM_003430, intron 1 of 3) AluSx1|SINE|Alu 992 NM_003430 7644 Hs.58834 NM_003430 ENSG00000167232 ZNF91 HPF7|HTF10 zinc finger protein 91 protein-coding chr8-2075 chr8 125618453 125618663 + 9.66 0.000 Intergenic MIR|SINE|MIR 186349 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr8-4679 chr8 139072616 139072826 + 9.66 0.000 Intergenic Intergenic -158680 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr18-869 chr18 36519525 36519735 + 9.66 0.000 intron (NM_001281740, intron 5 of 28) intron (NM_001281740, intron 5 of 28) 143788 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr10-5191 chr10 59971081 59971291 + 9.66 0.000 Intergenic L2a|LINE|L2 -10273 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr4-3348 chr4 3459994 3460204 + 9.66 0.000 Intergenic HERVL-int|LTR|ERVL -3207 NM_001164673 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr9-5352 chr9 89703463 89703673 + 9.66 0.000 intron (NR_024280, intron 5 of 5) MER49|LTR|ERV1 63785 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr22-4060 chr22 42362902 42363112 + 9.66 0.000 Intergenic Intergenic 6201 NR_120596 102723775 Hs.335413 NR_120595 ENSG00000229891 LINC01315 C22orf32-1|lnc-C22orf32-1 long intergenic non-protein coding RNA 1315 ncRNA chr14-2507 chr14 103935339 103935549 + 9.66 0.000 intron (NM_153046, intron 1 of 35) L2|LINE|L2 6988 NM_153046 122402 Hs.21454 NM_153046 ENSG00000156414 TDRD9 C14orf75|HIG-1|HLS|NET54|SPGF30|SPNE tudor domain containing 9 protein-coding chr11-4037 chr11 11064942 11065152 + 9.66 0.000 Intergenic HAL1|LINE|L1 206830 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr16-4451 chr16 55110044 55110254 + 9.66 0.000 Intergenic Intergenic 178950 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr17-2189 chr17 73193030 73193240 + 9.66 0.000 promoter-TSS (NM_018714) promoter-TSS (NM_018714) 80 NM_018714 9382 Hs.103555 NM_018714 ENSG00000166685 COG1 CDG2G|LDLB component of oligomeric golgi complex 1 protein-coding chr2-5325 chr2 75998887 75999097 + 9.66 0.000 Intergenic L2b|LINE|L2 -288077 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chrX-2262 chrX 48071248 48071458 + 9.66 0.000 promoter-TSS (NM_001037735) promoter-TSS (NM_001037735) -212 NM_001037735 57232 Hs.650883 NM_001037735 ENSG00000221994 ZNF630 dJ54B20.2 zinc finger protein 630 protein-coding chr8-2398 chr8 63094338 63094548 + 9.66 0.000 Intergenic ERVL-E-int|LTR|ERVL -8390 NM_000370 7274 Hs.69049 NM_000370 ENSG00000137561 TTPA ATTP|AVED|TTP1|alphaTTP alpha tocopherol transfer protein protein-coding chr10-2532 chr10 52244176 52244386 + 9.66 0.000 intron (NM_001098512, intron 9 of 17) intron (NM_001098512, intron 9 of 17) 69847 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr5-5775 chr5 173833244 173833454 + 9.66 0.000 Intergenic Intergenic -42407 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr5-1848 chr5 123119530 123119740 + 9.66 0.000 intron (NM_001136239, intron 3 of 7) intron (NM_001136239, intron 3 of 7) -29319 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr8-3100 chr8 30448266 30448476 + 9.66 0.000 intron (NM_001008710, intron 1 of 8) intron (NM_001008710, intron 1 of 8) -62970 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr6-7556 chr6 71480883 71481093 + 9.66 0.000 Intergenic Intergenic 59961 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr9-4645 chr9 114284503 114284713 + 9.66 0.000 intron (NM_032888, intron 40 of 60) MIR3|SINE|MIR -38415 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr5-2206 chr5 172319842 172320052 + 9.66 0.000 Intergenic MER113|DNA|hAT-Charlie 34350 NR_130933 100288254 Hs.531911 NM_001007542 LOC100288254 - uncharacterized LOC100288254 ncRNA chr12-7548 chr12 71377870 71378080 + 9.66 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -61823 NM_001277226 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding chr17-4666 chr17 19742771 19742981 + 9.66 0.000 intron (NM_000691, intron 3 of 10) intron (NM_000691, intron 3 of 10) 2583 NM_001135168 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr15-3339 chr15 81087061 81087271 + 9.66 0.000 Intergenic Intergenic -47104 NM_173528 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr16-4094 chr16 2257875 2258085 + 9.66 0.000 intron (NM_006711, intron 6 of 7) intron (NM_006711, intron 6 of 7) -6393 NM_001919 1632 Hs.403436 NM_001919 ENSG00000167969 ECI1 DCI enoyl-CoA delta isomerase 1 protein-coding chr3-9868 chr3 81120826 81121036 + 9.66 0.000 Intergenic Intergenic 127063 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr13-3278 chr13 43594087 43594297 + 9.66 0.000 intron (NM_001347965, intron 1 of 15) intron (NM_001347965, intron 1 of 15) 35285 NM_001127615 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr18-1815 chr18 14144391 14144601 + 9.66 0.000 Intergenic Intergenic -12006 NR_033354 162655 Hs.352635 NM_145287 ENSG00000175322 ZNF519 HsT2362 zinc finger protein 519 protein-coding chr5-6544 chr5 12840150 12840360 + 9.66 0.000 Intergenic Intergenic 172396 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-8657 chr7 71466018 71466228 + 9.66 0.000 intron (NM_022479, intron 5 of 10) LTR49|LTR|ERV1 -158353 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr16-2792 chr16 50806485 50806695 + 9.66 0.000 promoter-TSS (NR_146573) promoter-TSS (NR_146573) -82 NR_146573 105371252 NR_146573 ENSG00000261703 LINC02168 - long intergenic non-protein coding RNA 2168 ncRNA chr12-6409 chr12 76024942 76025152 + 9.66 0.000 TTS (NM_007350) TTS (NM_007350) 6729 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr20-2244 chr20 1199964 1200174 + 9.66 0.000 Intergenic MER66D|LTR|ERV1 -3385 NM_001009612 400831 Hs.148503 NM_001009612 ENSG00000215595 C20orf202 - chromosome 20 open reading frame 202 protein-coding chr4-5734 chr4 51963933 51964143 + 9.66 0.000 Intergenic Intergenic 56325 NM_001024611 339977 Hs.661450 NM_001024611 ENSG00000188993 LRRC66 - leucine rich repeat containing 66 protein-coding chr1-5754 chr1 115139023 115139233 + 9.66 0.000 Intergenic Intergenic -49625 NM_005725 10100 Hs.310458 NM_005725 ENSG00000134198 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding chr10-6218 chr10 48554258 48554468 + 9.66 0.000 intron (NR_144642, intron 3 of 9) intron (NR_144642, intron 3 of 9) -42774 NR_146782 100689073 Hs.667964 NR_146782 ARHGAP22-IT1 - ARHGAP22 intronic transcript 1 ncRNA chrX-4917 chrX 109402680 109402890 + 9.66 0.000 intron (NM_001522, intron 10 of 19) MIR3|SINE|MIR 79301 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr6-1918 chr6 37713808 37714018 + 9.66 0.000 Intergenic L2c|LINE|L2 -16030 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr12-2471 chr12 60266561 60266771 + 9.66 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 577296 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr7-5549 chr7 45797356 45797566 + 9.66 0.000 Intergenic Intergenic -7768 NR_146388 730234 Hs.714106 NR_146388 LOC730234 - uncharacterized LOC730234 ncRNA chr18-2369 chr18 60311681 60311891 + 9.66 0.000 Intergenic Charlie24|DNA|hAT-Charlie 60989 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr12-3448 chr12 114238665 114238875 + 9.66 0.000 TTS (NR_146536) TTS (NR_146536) 3000 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr18-1592 chr18 39604953 39605163 + 9.66 0.000 intron (NR_024391, intron 2 of 3) intron (NR_024391, intron 2 of 3) 17117 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr6-7219 chr6 40232220 40232430 + 9.66 0.000 Intergenic MIR3|SINE|MIR 123681 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr22-1458 chr22 50036286 50036496 + 9.66 0.000 intron (NM_001350317, intron 9 of 13) intron (NM_001350317, intron 9 of 13) 21836 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr11-9290 chr11 45146044 45146254 + 9.66 0.000 intron (NM_001359633, intron 2 of 7) intron (NM_001359633, intron 2 of 7) -1194 NM_001256695 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr10-6875 chr10 31532542 31532752 + 9.66 0.000 Intergenic L1ME1|LINE|L1 -132892 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr1-5122 chr1 152812586 152812796 + 9.66 0.000 exon (NM_178349, exon 1 of 1) exon (NM_178349, exon 1 of 1) 720 NM_178349 353132 Hs.375103 NM_178349 ENSG00000196734 LCE1B LEP2|SPRL2A late cornified envelope 1B protein-coding chr11-2069 chr11 77914297 77914507 + 9.66 0.000 intron (NM_033547, intron 15 of 22) intron (NM_033547, intron 15 of 22) 73264 NM_001363564 28971 Hs.745040 NM_024684 ENSG00000087884 AAMDC C11orf67|CK067|PTD015 adipogenesis associated Mth938 domain containing protein-coding chr2-6456 chr2 159011062 159011272 + 9.66 0.000 intron (NM_001350063, intron 2 of 24) MIR|SINE|MIR 42527 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr6-5314 chr6 143325581 143325791 + 9.66 0.000 intron (NM_016108, intron 4 of 5) intron (NM_016108, intron 4 of 5) 116991 NM_001286259 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase tRNA specific 2 protein-coding chr20-1005 chr20 63575795 63576005 + 9.66 0.000 Intergenic Intergenic -1661 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr9-1880 chr9 108002507 108002717 + 9.66 0.000 Intergenic Intergenic -512843 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr13-2305 chr13 31905743 31905953 + 9.66 0.000 intron (NR_027062, intron 1 of 3) intron (NR_027062, intron 1 of 3) 59065 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr15-4709 chr15 66901302 66901512 + 9.66 0.000 Intergenic Intergenic 55108 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr21-1413 chr21 10401549 10401759 + 9.66 0.000 Intergenic AluSx|SINE|Alu -11866 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding chr7-5349 chr7 29405227 29405437 + 9.66 0.000 intron (NM_001293072, intron 6 of 12) intron (NM_001293072, intron 6 of 12) -74380 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr9-8130 chr9 100823071 100823281 + 9.66 0.000 Intergenic L2b|LINE|L2 -205551 NM_207299 54886 Hs.382683 NM_017753 ENSG00000148123 PLPPR1 LPPR1|PRG-3 phospholipid phosphatase related 1 protein-coding chr1-6450 chr1 17699109 17699319 + 9.66 0.000 Intergenic Intergenic -56119 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr6-1711 chr6 27177931 27178141 + 9.66 0.000 Intergenic Intergenic 30410 NR_036096 100422934 NR_036096 ENSG00000265565 MIR3143 mir-3143 microRNA 3143 ncRNA chr2-4714 chr2 232577077 232577287 + 9.66 0.000 intron (NM_001330203, intron 6 of 6) intron (NM_001330203, intron 6 of 6) 26376 NM_001330202 9470 Hs.292026 NM_004846 ENSG00000135930 EIF4E2 4E-LP|4EHP|EIF4EL3|IF4e|h4EHP eukaryotic translation initiation factor 4E family member 2 protein-coding chr17-5143 chr17 8120610 8120820 + 9.66 0.000 3' UTR (NM_001165967, exon 4 of 4) 3' UTR (NM_001165967, exon 4 of 4) -1799 NM_001165960 59344 Hs.232770 NM_021628 ENSG00000179148 ALOXE3 ARCI3|E-LOX|eLOX-3|eLOX3 arachidonate lipoxygenase 3 protein-coding chr7-9061 chr7 103972969 103973179 + 9.66 0.000 intron (NM_005045, intron 1 of 64) intron (NM_005045, intron 1 of 64) 16442 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr2-13694 chr2 165319537 165319747 + 9.66 0.000 intron (NM_001040143, intron 12 of 27) THE1B|LTR|ERVL-MaLR 25587 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr1-8906 chr1 6299272 6299482 + 9.66 0.000 intron (NM_181866, intron 6 of 8) intron (NM_181866, intron 6 of 8) -38279 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr14-1142 chr14 21748888 21749098 + 9.66 0.000 Intergenic Intergenic -77976 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr3-11130 chr3 187535408 187535618 + 9.66 0.000 Intergenic Intergenic 88467 NR_146716 105374261 Hs.535726 NR_146716 LINC02041 - long intergenic non-protein coding RNA 2041 ncRNA chr22-784 chr22 44939643 44939853 + 9.66 0.000 intron (NM_001284296, intron 2 of 13) intron (NM_001284296, intron 2 of 13) 63871 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr2-8972 chr2 190190533 190190743 + 9.66 0.000 intron (NM_032321, intron 1 of 1) L1ME2|LINE|L1 9775 NM_001042519 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding chr16-3217 chr16 85486848 85487058 + 9.66 0.000 Intergenic Intergenic -124456 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr1-13655 chr1 10947536 10947746 + 9.66 0.000 intron (NM_001170754, intron 12 of 12) intron (NM_001170754, intron 12 of 12) 19046 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr9-5403 chr9 94414590 94414800 + 9.66 0.000 intron (NM_032558, intron 1 of 11) AluSg|SINE|Alu 40126 NM_032558 84641 Hs.555996 NM_032558 ENSG00000148110 MFSD14B HIATL1 major facilitator superfamily domain containing 14B protein-coding chr1-15800 chr1 176913607 176913817 + 9.66 0.000 intron (NM_207108, intron 16 of 21) MER92B|LTR|ERV1 115733 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr15-3504 chr15 98944000 98944210 + 9.66 0.000 intron (NM_000875, intron 19 of 20) intron (NM_000875, intron 19 of 20) 61551 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr1-3221 chr1 177411844 177412054 + 9.66 0.000 Intergenic Intergenic 60363 NR_126001 102724661 Hs.146628 NR_126001 LINC01645 - long intergenic non-protein coding RNA 1645 ncRNA chr1-13099 chr1 183498752 183498962 + 9.66 0.000 intron (NM_001174061, intron 1 of 21) L1MC1|LINE|L1 26358 NM_201568 9887 Hs.591463 NM_014837 ENSG00000116698 SMG7 C1orf16|EST1C|SGA56M SMG7 nonsense mediated mRNA decay factor protein-coding chr14-1873 chr14 80638117 80638327 + 9.66 0.000 intron (NM_152446, intron 19 of 24) intron (NM_152446, intron 19 of 24) 303516 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr18-612 chr18 3016300 3016510 + 9.66 0.000 Intergenic Intergenic -4458 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr6-1938 chr6 97827140 97827350 + 9.66 0.000 Intergenic Intergenic -197286 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr12-4247 chr12 112606113 112606323 + 9.66 0.000 intron (NM_001347952, intron 1 of 21) intron (NM_001347952, intron 1 of 21) 30982 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr2-8458 chr2 122116520 122116730 + 9.66 0.000 Intergenic L1MA4A|LINE|L1 360974 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr11-2660 chr11 62889602 62889812 + 9.66 0.000 TTS (NR_037193) TTS (NR_037193) 8008 NR_037193 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr11-3115 chr11 34331391 34331601 + 9.66 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 26514 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr9-3802 chr9 128233826 128234036 + 9.66 0.000 intron (NM_001288739, intron 10 of 21) CpG 10899 NR_029619 406978 NR_029619 ENSG00000207581 MIR199B MIRN199B|mir-199b microRNA 199b ncRNA chr8-3219 chr8 132426407 132426617 + 9.66 0.000 intron (NM_004519, intron 1 of 14) LTR53|LTR|ERVL 20750 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr16-6310 chr16 48105233 48105443 + 9.66 0.000 intron (NM_033226, intron 18 of 28) intron (NM_033226, intron 18 of 28) 41432 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr7-7956 chr7 11670986 11671196 + 9.66 0.000 intron (NM_015204, intron 1 of 26) intron (NM_015204, intron 1 of 26) 161107 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr2-8093 chr2 75528129 75528339 + 9.66 0.000 intron (NM_001369524, intron 2 of 5) L1PB1|LINE|L1 4166 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr19-3942 chr19 50638413 50638623 + 9.66 0.000 promoter-TSS (NM_032298) promoter-TSS (NM_032298) -473 NM_032298 84258 Hs.515554 NM_032298 ENSG00000213023 SYT3 SytIII synaptotagmin 3 protein-coding chr8-2586 chr8 47980004 47980214 + 9.66 0.000 Intergenic Intergenic 19168 NM_005914 4173 Hs.460184 NM_005914 ENSG00000104738 MCM4 CDC21|CDC54|IMD54|NKCD|NKGCD|P1-CDC21|hCdc21 minichromosome maintenance complex component 4 protein-coding chr11-8616 chr11 2247338 2247548 + 9.66 0.000 Intergenic HERV16-int|LTR|ERVL 23509 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr12-4178 chr12 91183538 91183748 + 9.66 0.000 promoter-TSS (NM_001920) promoter-TSS (NM_001920) -826 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr19-3349 chr19 10274953 10275163 + 9.66 0.000 intron (NM_000201, intron 2 of 6) intron (NM_000201, intron 2 of 6) 3938 NM_000201 3383 Hs.643447 NM_000201 ENSG00000090339 ICAM1 BB2|CD54|P3.58 intercellular adhesion molecule 1 protein-coding chr15-3148 chr15 67196820 67197030 + 9.66 0.000 Intergenic L2c|LINE|L2 30770 NM_001145104 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr10-7694 chr10 29725339 29725549 + 9.66 0.000 intron (NM_001323599, intron 1 of 38) intron (NM_001323599, intron 1 of 38) 10357 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr9-1687 chr9 91188007 91188217 + 9.66 0.000 Intergenic Intergenic 69050 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr4-6063 chr4 7251319 7251529 + 9.66 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 58886 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr13-3580 chr13 26994627 26994837 + 9.66 0.000 Intergenic Intergenic -130801 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr18-481 chr18 76611069 76611279 + 9.66 0.000 Intergenic Intergenic -8603 NR_120419 400660 Hs.131718 NR_120419 ENSG00000266256 LINC00683 - long intergenic non-protein coding RNA 683 ncRNA chr8-4161 chr8 78079788 78079998 + 9.66 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -436447 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr2-8187 chr2 88110745 88110955 + 9.66 0.000 3' UTR (NM_198274, exon 10 of 10) 3' UTR (NM_198274, exon 10 of 10) 17212 NM_001443 2168 Hs.380135 NM_001443 ENSG00000163586 FABP1 FABPL|L-FABP fatty acid binding protein 1 protein-coding chr17-1675 chr17 81672126 81672336 + 9.66 0.000 intron (NM_199287, intron 5 of 5) FLAM_C|SINE|Alu 5494 NM_199287 339230 Hs.744125 NM_199287 ENSG00000185298 CCDC137 RaRF coiled-coil domain containing 137 protein-coding chr16-1906 chr16 88554863 88555073 + 9.66 0.000 Intergenic Intergenic 7015 NR_146877 400555 Hs.120392 NM_001001682 ZC3H18-AS1 C16orf85|LINC00859 ZC3H18 antisense RNA 1 (head to head) ncRNA chr2-14268 chr2 215045455 215045665 + 9.66 0.000 intron (NR_103740, intron 8 of 54) intron (NR_103740, intron 8 of 54) -13474 NM_015657 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr18-3308 chr18 54917324 54917534 + 9.66 0.000 intron (NM_001143829, intron 10 of 11) intron (NM_001143829, intron 10 of 11) 40619 NM_001143829 80323 Hs.120790 NM_025214 ENSG00000166510 CCDC68 SE57-1 coiled-coil domain containing 68 protein-coding chr11-10323 chr11 109306587 109306797 + 9.66 0.000 Intergenic MIRb|SINE|MIR -115498 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr8-4239 chr8 89639951 89640161 + 9.66 0.000 Intergenic L1M2|LINE|L1 117655 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr7-1964 chr7 114712635 114712845 + 9.66 0.000 Intergenic Intergenic 59395 NR_037439 100500896 NR_037439 ENSG00000272230 MIR3666 - microRNA 3666 ncRNA chr5-3263 chr5 104188807 104189017 + 9.66 0.000 Intergenic Intergenic -626123 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chrX-989 chrX 8731630 8731840 + 9.66 0.000 intron (NM_000216, intron 1 of 13) CpG 402 NM_000216 3730 Hs.521869 NM_000216 ENSG00000011201 ANOS1 ADMLX|HH1|HHA|KAL|KAL1|KALIG-1|KMS|WFDC19 anosmin 1 protein-coding chr2-9036 chr2 198421791 198422001 + 9.66 0.000 Intergenic Intergenic -46799 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2-6416 chr2 140465102 140465312 + 9.66 0.000 intron (NM_018557, intron 60 of 90) MSTA|LTR|ERVL-MaLR 121478 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr16-4463 chr16 56075745 56075955 + 9.66 0.000 Intergenic HAL1|LINE|L1 115244 NR_027078 283856 Hs.707433 NR_027078 ENSG00000246379 LOC283856 - uncharacterized LOC283856 ncRNA chr2-4764 chr2 26177650 26177860 + 9.66 0.000 intron (NM_001168241, intron 2 of 5) AluSx1|SINE|Alu -2961 NM_001191033 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr11-8318 chr11 75628343 75628553 + 9.66 0.000 intron (NM_207577, intron 1 of 2) LTR78|LTR|ERV1 39986 NM_033063 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr16-2081 chr16 87352615 87352825 + 9.66 0.000 intron (NM_024735, intron 2 of 8) intron (NM_024735, intron 2 of 8) 31056 NM_024735 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr7-6340 chr7 147637083 147637293 + 9.66 0.000 intron (NM_014141, intron 11 of 22) L2a|LINE|L2 -34491 NR_133929 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr1-15691 chr1 167981878 167982088 + 9.66 0.000 intron (NM_001017977, intron 4 of 18) L1PA16|LINE|L1 -16677 NR_031702 100313835 NR_031702 ENSG00000221545 MIR1255B2 MIR1255B-2|MIRN1255B2|hsa-mir-1255b-2 microRNA 1255b-2 ncRNA chr19-3988 chr19 1525065 1525275 + 9.66 0.000 intron (NM_001243079, intron 1 of 13) intron (NM_001243079, intron 1 of 13) 1093 NM_001243079 126520 Hs.195352 NM_001011716 ENSG00000185988 PLK5 PLK-5|PLK5P|SgK384ps polo like kinase 5 protein-coding chr9-2872 chr9 129783887 129784097 + 9.66 0.000 Intergenic Intergenic -19151 NR_133948 27348 Hs.252682 NM_014506 ENSG00000136816 TOR1B DQ1 torsin family 1 member B protein-coding chr10-4708 chr10 245889 246099 + 9.66 0.000 intron (NM_001370109, intron 9 of 13) intron (NM_001370109, intron 9 of 13) 66000 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr10-2874 chr10 90884707 90884917 + 9.66 0.000 intron (NM_006413, intron 5 of 10) intron (NM_006413, intron 5 of 10) 12838 NM_001104546 10556 Hs.139120 NM_006413 ENSG00000148688 RPP30 TSG15 ribonuclease P/MRP subunit p30 protein-coding chr2-9490 chr2 236208401 236208611 + 9.66 0.000 intron (NM_212556, intron 4 of 5) intron (NM_212556, intron 4 of 5) -40120 NM_001485 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr7-4865 chr7 106586085 106586295 + 9.66 0.000 Intergenic Intergenic 74968 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr5-8638 chr5 139826347 139826557 + 9.66 0.000 intron (NM_032289, intron 7 of 14) L2b|LINE|L2 30644 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chrX-4877 chrX 106415325 106415535 + 9.66 0.000 Intergenic Intergenic -196500 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr1-4588 chr1 111342143 111342353 + 9.66 0.000 Intergenic L1M3f|LINE|L1 -4312 NR_125338 128344 Hs.172510 NM_181643 ENSG00000173947 PIFO C1orf88|pitchfork primary cilia formation protein-coding chr20-4085 chr20 39492818 39493028 + 9.66 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -268175 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr17-3403 chr17 3627815 3628025 + 9.66 0.000 intron (NM_013276, intron 2 of 6) intron (NM_013276, intron 2 of 6) 8330 NM_013276 23729 Hs.579217 NM_013276 ENSG00000197417 SHPK CARKL|SHK sedoheptulokinase protein-coding chr13-1525 chr13 24968362 24968572 + 9.66 0.000 promoter-TSS (NR_026730) promoter-TSS (NR_026730) 2 NR_026730 646405 Hs.620592 NM_001126062 TPTE2P1 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 pseudo chr3-5224 chr3 88318823 88319033 + 9.66 0.000 Intergenic Intergenic -19528 NM_001368165 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr5-2871 chr5 84603921 84604131 + 9.66 0.000 Intergenic Intergenic -219146 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr17-5557 chr17 44637918 44638128 + 9.66 0.000 Intergenic AluJo|SINE|Alu 12326 NR_110661 101927017 Hs.560554 NR_110661 ENSG00000266979 LINC01180 - long intergenic non-protein coding RNA 1180 ncRNA chr6-1164 chr6 34165333 34165543 + 9.66 0.000 Intergenic L1MA2|LINE|L1 -9816 NM_001256809 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr15-2798 chr15 36808374 36808584 + 9.66 0.000 3' UTR (NM_001321757, exon 12 of 13) 3' UTR (NM_001321757, exon 12 of 13) 10027 NR_027320 161635 Hs.659822 NR_027320 CSNK1A1P1 CSNK1A1P casein kinase 1 alpha 1 pseudogene 1 pseudo chr16-3774 chr16 29304517 29304727 + 9.66 0.000 intron (NR_002939, intron 1 of 8) intron (NR_002939, intron 1 of 8) 2335 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chrX-994 chrX 17896021 17896231 + 9.66 0.000 Intergenic L2a|LINE|L2 -34789 NM_001172743 10742 Hs.446680 NM_021785 ENSG00000131831 RAI2 - retinoic acid induced 2 protein-coding chr4-4464 chr4 55010866 55011076 + 9.66 0.000 Intergenic AluJb|SINE|Alu 114624 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr1-9143 chr1 19278562 19278772 + 9.66 0.000 Intergenic L1MB7|LINE|L1 -4545 NM_001348421 246181 Hs.662342 NM_001145289 ENSG00000211454 AKR7L AFAR3|AFB1-AR 3|AFB1-AR3|AKR7A4 aldo-keto reductase family 7 like (gene/pseudogene) protein-coding chr10-2856 chr10 70476296 70476506 + 9.66 0.000 Intergenic Intergenic -2366 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr13-2234 chr13 25059043 25059253 + 9.66 0.000 Intergenic Intergenic -36990 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr1-10188 chr1 111865162 111865372 + 9.66 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) -8362 NR_046783 100874295 Hs.738190 NR_046783 ENSG00000232558 KCND3-IT1 - KCND3 intronic transcript 1 ncRNA chr3-9095 chr3 28090658 28090868 + 9.66 0.000 Intergenic Intergenic -150856 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr8-5633 chr8 103373342 103373552 + 9.66 0.000 intron (NM_001256099, intron 1 of 3) intron (NM_001256099, intron 1 of 3) 940 NM_001256099 115908 Hs.405614 NM_138455 ENSG00000164932 CTHRC1 - collagen triple helix repeat containing 1 protein-coding chr11-7742 chr11 75460560 75460770 + 9.66 0.000 intron (NM_030792, intron 4 of 16) AluJb|SINE|Alu -8338 NM_001351167 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr9-2733 chr9 94933501 94933711 + 9.66 0.000 TTS (NM_001193331) TTS (NM_001193331) 11948 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr1-5205 chr1 179166856 179167066 + 9.66 0.000 intron (NM_007314, intron 1 of 11) L1MA4A|LINE|L1 -23885 NM_005158 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr2-6151 chr2 236133895 236134105 + 9.66 0.000 Intergenic Intergenic 34386 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr7-1803 chr7 100344688 100344898 + 9.66 0.000 intron (NR_036570, intron 3 of 16) LTR13|LTR|ERVK -7525 NR_103728 101752334 Hs.521075 NR_103728 PVRIG2P - poliovirus receptor related immunoglobulin domain containing 2, pseudogene pseudo chr1-11052 chr1 224252594 224252804 + 9.66 0.000 intron (NM_002533, intron 18 of 22) LTR37B|LTR|ERV1 4411 NR_031574 100313769 NR_031574 ENSG00000221406 MIR320B2 MIR320B-2|MIRN320B2|mir-320b-2 microRNA 320b-2 ncRNA chr12-893 chr12 105235974 105236184 + 9.66 0.000 promoter-TSS (NM_018171) promoter-TSS (NM_018171) 95 NM_018171 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr9-3470 chr9 6302549 6302759 + 9.66 0.000 Intergenic L1M5|LINE|L1 -25721 NM_001001875 89882 Hs.351815 NM_033516 ENSG00000170777 TPD52L3 D55|NYDSP25|hD55 TPD52 like 3 protein-coding chr2-5394 chr2 105378964 105379174 + 9.66 0.000 intron (NM_001318899, intron 3 of 7) intron (NM_001318899, intron 3 of 7) 19982 NM_001450 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr22-3812 chr22 30504170 30504380 + 9.66 0.000 intron (NM_001161368, intron 1 of 11) AluJo|SINE|Alu 1420 NM_174977 284904 Hs.517541 NM_174977 ENSG00000133488 SEC14L4 TAP3 SEC14 like lipid binding 4 protein-coding chr11-3464 chr11 72856904 72857114 + 9.66 0.000 intron (NM_014824, intron 13 of 19) intron (NM_014824, intron 13 of 19) 42598 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr12-7664 chr12 84068393 84068603 + 9.66 0.000 Intergenic L2a|LINE|L2 844301 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr11-5903 chr11 12980482 12980692 + 9.66 0.000 non-coding (NR_038904, exon 2 of 2) non-coding (NR_038904, exon 2 of 2) 8961 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr16-6408 chr16 55404299 55404509 + 9.66 0.000 Intergenic L1MC5a|LINE|L1 57893 NR_147198 107984884 Hs.666473 NR_147198 MMP2-AS1 - MMP2 antisense RNA 1 ncRNA chr6-4908 chr6 96232396 96232606 + 9.66 0.000 Intergenic Intergenic 216527 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr3-3040 chr3 123881229 123881439 + 9.66 0.000 intron (NM_001321309, intron 1 of 32) intron (NM_001321309, intron 1 of 32) 2998 NM_053025 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr8-7063 chr8 115809184 115809394 + 9.66 0.000 Intergenic Intergenic -140314 NM_014112 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr10-7556 chr10 15750280 15750490 + 9.66 0.000 Intergenic AluJb|SINE|Alu -30050 NM_001291494 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr1-7456 chr1 63096935 63097145 + 9.66 0.000 Intergenic Intergenic -84569 NR_146606 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr17-5775 chr17 61906274 61906484 + 9.66 0.000 intron (NM_001351695, intron 8 of 24) Tigger6a|DNA|TcMar-Tigger 21603 NM_001330417 57508 Hs.279646 NM_020748 ENSG00000108506 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding chr2-7616 chr2 26638284 26638494 + 9.66 0.000 intron (NM_001029881, intron 2 of 6) intron (NM_001029881, intron 2 of 6) 2977 NM_001029881 130106 Hs.591579 NM_001029881 ENSG00000157884 CIB4 KIP4 calcium and integrin binding family member 4 protein-coding chr5-3303 chr5 122915818 122916028 + 9.66 0.000 intron (NM_014035, intron 1 of 6) L2a|LINE|L2 70310 NM_014035 28966 Hs.483200 NM_014035 ENSG00000064652 SNX24 PRO1284|SBBI31 sorting nexin 24 protein-coding chr5-6650 chr5 52811412 52811622 + 9.66 0.000 intron (NM_181501, intron 1 of 28) intron (NM_181501, intron 1 of 28) 23601 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr8-2102 chr8 139792678 139792888 + 9.66 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -89660 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr22-3883 chr22 35197641 35197851 + 9.66 0.000 intron (NR_126356, intron 1 of 5) AluJo|SINE|Alu 33310 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA chr4-4719 chr4 89619874 89620084 + 9.66 0.000 Intergenic MIRb|SINE|MIR -216422 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr6-8551 chr6 161891683 161891893 + 9.66 0.000 intron (NM_004562, intron 6 of 11) intron (NM_004562, intron 6 of 11) 420811 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr1-11103 chr1 229920658 229920868 + 9.66 0.000 Intergenic Intergenic -26855 NR_146475 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr10-3639 chr10 97865665 97865875 + 9.66 0.000 3' UTR (NM_001010917, exon 5 of 5) 3' UTR (NM_001010917, exon 5 of 5) 10127 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr2-12811 chr2 90065193 90065403 + 9.66 0.000 Intergenic L1PA13|LINE|L1 -427391 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr12-3946 chr12 5870000 5870210 + 9.66 0.000 intron (NM_001278596, intron 3 of 25) intron (NM_001278596, intron 3 of 25) 75154 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr4-2559 chr4 84067436 84067646 + 9.66 0.000 intron (NR_125909, intron 7 of 8) MamRep605|LTR?|LTR? 231628 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr4-6210 chr4 54893655 54893865 + 9.66 0.000 Intergenic Intergenic 231835 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr11-7049 chr11 119917045 119917255 + 9.66 0.000 Intergenic Intergenic 187567 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr2-10096 chr2 54651066 54651276 + 9.66 0.000 intron (NM_178313, intron 25 of 30) intron (NM_178313, intron 25 of 30) -73841 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr3-3949 chr3 50407855 50408065 + 9.66 0.000 intron (NM_001291101, intron 3 of 37) intron (NM_001291101, intron 3 of 37) 42597 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chrX-2767 chrX 130356226 130356436 + 9.66 0.000 intron (NM_001282196, intron 6 of 10) AluSx|SINE|Alu 16412 NM_001282196 9016 Hs.194686 NM_003951 ENSG00000102078 SLC25A14 BMCP1|UCP5 solute carrier family 25 member 14 protein-coding chr1-9894 chr1 69494637 69494847 + 9.66 0.000 Intergenic MLT2D|LTR|ERVL 61487 NR_147164 105378788 Hs.164441 NR_147164 ENSG00000229639 LINC01758 - long intergenic non-protein coding RNA 1758 ncRNA chr6-7598 chr6 76078248 76078458 + 9.66 0.000 Intergenic Intergenic -5675 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr3-5186 chr3 69056831 69057041 + 9.66 0.000 intron (NM_001363861, intron 10 of 15) intron (NM_001363861, intron 10 of 15) -4603 NM_001363879 7110 Hs.267632 NM_007114 ENSG00000144747 TMF1 ARA160|TMF TATA element modulatory factor 1 protein-coding chr12-4166 chr12 86660105 86660315 + 9.66 0.000 intron (NM_001351285, intron 2 of 8) intron (NM_001351285, intron 2 of 8) 84939 NR_162123 113839519 NR_162123 MIR3059 - microRNA 3059 ncRNA chr2-8413 chr2 118061450 118061660 + 9.66 0.000 Intergenic MER20|DNA|hAT-Charlie -26863 NM_001321330 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding chr1-9733 chr1 53863137 53863347 + 9.66 0.000 intron (NR_036639, intron 9 of 11) intron (NR_036639, intron 9 of 11) -24946 NM_018087 55706 Hs.476525 NM_018087 ENSG00000058804 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding chr5-1974 chr5 135567444 135567654 + 9.66 0.000 Intergenic MER45A|DNA|hAT-Tip100 -11616 NM_001349335 153328 Hs.412418 NM_145282 ENSG00000145832 SLC25A48 - solute carrier family 25 member 48 protein-coding chr16-3999 chr16 158319 158529 + 9.66 0.000 Intergenic L1MC4|LINE|L1 5780 NM_005332 3050 Hs.585357 NM_005332 ENSG00000130656 HBZ HBAZ|HBZ-T1|HBZ1 hemoglobin subunit zeta protein-coding chr22-2912 chr22 46548009 46548219 + 9.66 0.000 Intergenic MIRb|SINE|MIR -10494 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr10-3585 chr10 86598661 86598871 + 9.66 0.000 Intergenic Intergenic -55781 NM_033282 94233 Hs.283922 NM_033282 ENSG00000122375 OPN4 MOP opsin 4 protein-coding chr4-8636 chr4 174580604 174580814 + 9.66 0.000 Intergenic Intergenic -57811 NM_001145816 3248 Hs.596913 NM_000860 ENSG00000164120 HPGD 15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1 15-hydroxyprostaglandin dehydrogenase protein-coding chr5-9084 chr5 172142839 172143049 + 9.66 0.000 intron (NM_005990, intron 2 of 18) intron (NM_005990, intron 2 of 18) 45280 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr15-1555 chr15 68598631 68598841 + 9.66 0.000 intron (NM_006091, intron 1 of 11) intron (NM_006091, intron 1 of 11) -17804 NM_001190456 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr4-4426 chr4 48989286 48989496 + 9.66 0.000 intron (NM_001286791, intron 2 of 15) L1ME4b|LINE|L1 2749 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr22-1924 chr22 46261476 46261686 + 9.66 0.000 exon (NM_006071, exon 1 of 1) exon (NM_006071, exon 1 of 1) 1762 NM_006071 10343 Hs.241383 NM_006071 ENSG00000130943 PKDREJ - polycystin family receptor for egg jelly protein-coding chr19-2129 chr19 2199431 2199641 + 9.66 0.000 intron (NM_032482, intron 7 of 27) intron (NM_032482, intron 7 of 27) 34613 NR_031596 100302283 NR_031596 ENSG00000221411 MIR1227 MIRN1227|hsa-mir-1227|mir-1227 microRNA 1227 ncRNA chr2-8566 chr2 135264814 135265024 + 9.66 0.000 intron (NM_001286569, intron 13 of 21) AluSx|SINE|Alu 128291 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr6-3217 chr6 137261478 137261688 + 9.66 0.000 Intergenic Intergenic -42153 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr2-5278 chr2 63220682 63220892 + 9.66 0.000 intron (NR_148705, intron 13 of 16) L1PA10|LINE|L1 -101245 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr18-3338 chr18 57044333 57044543 + 9.66 0.000 Intergenic L2b|LINE|L2 27681 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr5-7533 chr5 37828488 37828698 + 9.66 0.000 intron (NM_001278098, intron 1 of 2) MIRb|SINE|MIR 6229 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr2-2601 chr2 11618220 11618430 + 9.66 0.000 exon (NM_014668, exon 22 of 33) exon (NM_014668, exon 22 of 33) 51870 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr13-613 chr13 28181414 28181624 + 9.66 0.000 intron (NM_175854, intron 4 of 18) AluJb|SINE|Alu -42345 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr9-7627 chr9 38085561 38085771 + 9.66 0.000 Intergenic MIRb|SINE|MIR -16439 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr8-5082 chr8 42382393 42382603 + 9.66 0.000 Intergenic Intergenic -5269 NM_014420 27121 Hs.159311 NM_014420 ENSG00000104371 DKK4 DKK-4 dickkopf WNT signaling pathway inhibitor 4 protein-coding chr15-2349 chr15 35690780 35690990 + 9.66 0.000 intron (NR_038251, intron 1 of 2) intron (NR_038251, intron 1 of 2) 144690 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr12-6332 chr12 55032783 55032993 + 9.66 0.000 Intergenic Intergenic 12914 NM_021191 58158 Hs.591024 NM_021191 ENSG00000123307 NEUROD4 ATH-3|ATH3|Atoh3|MATH-3|MATH3|bHLHa4 neuronal differentiation 4 protein-coding chr13-3175 chr13 109776555 109776765 + 9.66 0.000 intron (NM_003749, intron 1 of 1) intron (NM_003749, intron 1 of 1) 9923 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr10-2485 chr10 31536460 31536670 + 9.66 0.000 Intergenic Intergenic -136810 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr13-1542 chr13 28693751 28693961 + 9.66 0.000 Intergenic L1PA7|LINE|L1 25114 NM_001135919 283537 Hs.117167 NM_181785 ENSG00000139508 SLC46A3 FKSG16 solute carrier family 46 member 3 protein-coding chr2-3823 chr2 26318021 26318231 + 9.66 0.000 intron (NM_001145168, intron 1 of 12) intron (NM_001145168, intron 1 of 12) 923 NM_001145168 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr6-2662 chr6 2579500 2579710 + 9.66 0.000 Intergenic Intergenic -54895 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr8-3754 chr8 23141861 23142071 + 9.66 0.000 intron (NM_003840, intron 7 of 8) L1PA16|LINE|L1 22061 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr17-3697 chr17 17060225 17060435 + 9.66 0.000 intron (NM_201274, intron 1 of 23) intron (NM_201274, intron 1 of 23) 17570 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr17-5473 chr17 40533368 40533578 + 9.66 0.000 Intergenic Intergenic 26921 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr1-9271 chr1 25215150 25215360 + 9.66 0.000 Intergenic MamRep4096|DNA|hAT-Tip100 17247 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr15-3349 chr15 82648299 82648509 + 9.66 0.000 promoter-TSS (NM_030594) promoter-TSS (NM_030594) -354 NM_001365243 64506 Hs.459132 NM_030594 ENSG00000214575 CPEB1 CPE-BP1|CPEB|CPEB-1|h-CPEB|hCPEB-1 cytoplasmic polyadenylation element binding protein 1 protein-coding chr10-5800 chr10 107451398 107451608 + 9.66 0.000 Intergenic MIR3|SINE|MIR -286797 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr18-2493 chr18 52157571 52157781 + 9.66 0.000 Intergenic MIRc|SINE|MIR -182521 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr22-3884 chr22 35202931 35203141 + 9.66 0.000 intron (NR_126356, intron 1 of 5) intron (NR_126356, intron 1 of 5) 28020 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA chr10-7969 chr10 58132348 58132558 + 9.66 0.000 Intergenic Intergenic 135441 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr6-6173 chr6 5522109 5522319 + 9.66 0.000 intron (NM_006567, intron 4 of 6) intron (NM_006567, intron 4 of 6) -64139 NR_125847 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA chr14-3080 chr14 63094825 63095035 + 9.66 0.000 Intergenic MER1B|DNA|hAT-Charlie -49472 NM_172375 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr11-4410 chr11 83635451 83635661 + 9.66 0.000 intron (NM_001142699, intron 18 of 27) intron (NM_001142699, intron 18 of 27) 46869 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr10-4727 chr10 769650 769860 + 9.66 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -80087 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr4-1126 chr4 141221172 141221382 + 9.66 0.000 intron (NM_014487, intron 1 of 9) intron (NM_014487, intron 1 of 9) 382 NM_014487 27309 Hs.120766 NM_014487 ENSG00000109445 ZNF330 HSA6591|NOA36 zinc finger protein 330 protein-coding chr6-3718 chr6 2038111 2038321 + 9.66 0.000 intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 137775 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr16-3394 chr16 69712370 69712580 + 9.66 0.000 intron (NM_001286137, intron 3 of 3) intron (NM_001286137, intron 3 of 3) -3800 NR_145753 109617018 NR_145753 SNORD13H - small nucleolar RNA, C/D box 13H snoRNA chr6-2267 chr6 71989927 71990137 + 9.66 0.000 intron (NM_001350411, intron 2 of 3) intron (NM_001350411, intron 2 of 3) 103329 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr16-4350 chr16 31505095 31505305 + 9.66 0.000 intron (NM_022744, intron 2 of 12) LTR5B|LTR|ERVK 3191 NM_022744 64755 Hs.9003 NM_022744 ENSG00000140688 C16orf58 RUS chromosome 16 open reading frame 58 protein-coding chr2-4490 chr2 6822227 6822437 + 9.66 0.000 Intergenic Intergenic 18132 NR_126359 104326052 Hs.7155 NR_126359 NRIR lncRNA-CMPK2 negative regulator of interferon response ncRNA chr2-7750 chr2 38394929 38395139 + 9.66 0.000 Intergenic L1PA15|LINE|L1 -16450 NM_001330462 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chrX-1604 chrX 99024475 99024685 + 9.66 0.000 Intergenic L1MA9|LINE|L1 1385693 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr1-11890 chr1 46091216 46091426 + 9.66 0.000 intron (NM_001303427, intron 1 of 9) AluSx|SINE|Alu 39352 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr6-3965 chr6 104305820 104306030 + 9.66 0.000 Intergenic Intergenic 553621 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr4-2650 chr4 183733625 183733835 + 9.66 0.000 Intergenic LTR16D|LTR|ERVL -64292 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr2-9140 chr2 209992273 209992483 + 9.66 0.000 intron (NM_032504, intron 61 of 63) FLAM_C|SINE|Alu -10187 NM_001278283 6120 Hs.282260 NM_006916 ENSG00000197713 RPE RPE2-1 ribulose-5-phosphate-3-epimerase protein-coding chr2-9694 chr2 46025061 46025271 + 9.66 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -272241 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chrX-1746 chrX 44314371 44314581 + 9.66 0.000 intron (NM_025184, intron 1 of 14) intron (NM_025184, intron 1 of 14) 29196 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr5-5771 chr5 173556653 173556863 + 9.66 0.000 Intergenic MER91C|DNA|hAT-Tip100 -22876 NR_027109 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr5-8642 chr5 139887493 139887703 + 9.66 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 91790 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr4-3265 chr4 102312249 102312459 + 9.66 0.000 intron (NM_022154, intron 2 of 7) Tigger20a|DNA|TcMar-Tigger 11958 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chrX-3568 chrX 71248833 71249043 + 9.66 0.000 TTS (NM_001171163) TTS (NM_001171163) 5202 NM_201599 9203 Hs.522684 NM_005096 ENSG00000147130 ZMYM3 DXS6673E|MYM|XFIM|ZNF198L2|ZNF261 zinc finger MYM-type containing 3 protein-coding chr9-8828 chr9 135310012 135310222 + 9.66 0.000 Intergenic Intergenic -33132 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr16-2399 chr16 69465565 69465775 + 9.66 0.000 3' UTR (NM_030579, exon 5 of 5) 3' UTR (NM_030579, exon 5 of 5) 41075 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr9-7709 chr9 72852658 72852868 + 9.66 0.000 Intergenic Intergenic 21346 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr19-2801 chr19 47540763 47540973 + 9.66 0.000 intron (NM_001277075, intron 6 of 16) intron (NM_001277075, intron 6 of 16) -25805 NM_003827 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chr16-3724 chr16 5629467 5629677 + 9.66 0.000 Intergenic Intergenic -2895 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA chr6-8476 chr6 156447224 156447434 + 9.66 0.000 Intergenic Intergenic 68579 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chrX-4684 chrX 84258427 84258637 + 9.66 0.000 Intergenic Intergenic -32704 NR_031690 100302191 NR_031690 ENSG00000221494 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA chr6-3917 chr6 73803666 73803876 + 9.66 0.000 intron (NM_001159588, intron 23 of 31) intron (NM_001159588, intron 23 of 31) 107568 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr7-3123 chr7 44923484 44923694 + 9.66 0.000 Intergenic Intergenic -38059 NM_033224 5814 Hs.349150 NM_033224 ENSG00000146676 PURB PURBETA purine rich element binding protein B protein-coding chr1-6778 chr1 81063727 81063937 + 9.66 0.000 Intergenic Intergenic -242360 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr8-6728 chr8 87165995 87166205 + 9.66 0.000 intron (NM_173538, intron 4 of 10) intron (NM_173538, intron 4 of 10) 299685 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr1-11003 chr1 218718369 218718579 + 9.66 0.000 intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 200037 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chrX-432 chrX 50204425 50204635 + 9.66 0.000 promoter-TSS (NM_033031) promoter-TSS (NM_033031) -235 NM_033031 85417 Hs.130310 NM_033031 ENSG00000147082 CCNB3 - cyclin B3 protein-coding chr2-9517 chr2 237562294 237562504 + 9.66 0.000 Intergenic Intergenic -4175 NM_015893 51052 Hs.247710 NM_015893 ENSG00000071677 PRLH PRH|PRRP prolactin releasing hormone protein-coding chr9-4035 chr9 88990938 88991148 + 9.66 0.000 promoter-TSS (NM_005226) promoter-TSS (NM_005226) 180 NM_001142413 286223 Hs.585118 NM_001001938 ENSG00000213694 C9orf47 C9orf108|bA791O21.3 chromosome 9 open reading frame 47 protein-coding chr20-2747 chr20 50607730 50607940 + 9.66 0.000 intron (NM_001290268, intron 11 of 21) intron (NM_001290268, intron 11 of 21) 6950 NR_031634 100302146 NR_031634 ENSG00000221091 MIR1302-5 MIRN1302-5|hsa-mir-1302-5 microRNA 1302-5 ncRNA chr14-2112 chr14 74605984 74606194 + 9.66 0.000 intron (NM_000428, intron 1 of 35) intron (NM_000428, intron 1 of 35) 6148 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr1-3503 chr1 154878510 154878720 + 9.66 0.000 Intergenic Intergenic -8334 NM_002249 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr11-3793 chr11 64448175 64448385 + 9.66 0.000 promoter-TSS (NR_073177) promoter-TSS (NR_073177) -777 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr16-1673 chr16 84430677 84430887 + 9.66 0.000 intron (NM_001291454, intron 8 of 23) MIRb|SINE|MIR 24194 NM_001291454 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr18-507 chr18 34224608 34224818 + 9.66 0.000 Intergenic CpG -1162 NM_001353237 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr18-2208 chr18 63641874 63642084 + 9.66 0.000 intron (NM_002974, intron 3 of 7) intron (NM_002974, intron 3 of 7) 2277 NM_175041 6318 Hs.123035 NM_002974 ENSG00000206073 SERPINB4 LEUPIN|PI11|SCCA-2|SCCA1|SCCA2 serpin family B member 4 protein-coding chr4-4420 chr4 48047332 48047542 + 9.66 0.000 Intergenic MER5B|DNA|hAT-Charlie 30665 NM_207330 152519 Hs.134190 NM_207330 ENSG00000163293 NIPAL1 NPAL1 NIPA like domain containing 1 protein-coding chr9-4952 chr9 16139649 16139859 + 9.66 0.000 Intergenic Intergenic 113353 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr12-3487 chr12 122930097 122930307 + 9.66 0.000 intron (NM_001243013, intron 10 of 10) intron (NM_001243013, intron 10 of 10) -34078 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr2-12353 chr2 50651762 50651972 + 9.66 0.000 intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) 44395 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA chr1-10995 chr1 217426693 217426903 + 9.66 0.000 TTS (NM_018040) TTS (NM_018040) 204292 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr7-3697 chr7 53256735 53256945 + 9.66 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 221207 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr1-11360 chr1 36349732 36349942 + 9.66 0.000 intron (NM_001282546, intron 6 of 10) intron (NM_001282546, intron 6 of 10) -25683 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr2-11295 chr2 189204478 189204688 + 9.66 0.000 Intergenic Intergenic -24822 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr6-5307 chr6 143097884 143098094 + 9.66 0.000 intron (NM_001366344, intron 2 of 6) L2|LINE|L2 -28150 NM_001366358 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr19-6268 chr19 7651174 7651384 + 9.66 0.000 Intergenic AluJr|SINE|Alu 14169 NM_001272034 6813 Hs.515104 NM_006949 ENSG00000076944 STXBP2 FHL5|Hunc18b|MUNC18-2|UNC18-2|UNC18B|pp10122 syntaxin binding protein 2 protein-coding chr4-8048 chr4 120731778 120731988 + 9.66 0.000 intron (NM_001300824, intron 12 of 13) MLT1J|LTR|ERVL-MaLR 190983 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr13-1703 chr13 90717547 90717757 + 9.66 0.000 Intergenic MIRc|SINE|MIR 208945 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr16-5515 chr16 20039648 20039858 + 9.66 0.000 intron (NM_001002911, intron 1 of 1) intron (NM_001002911, intron 1 of 1) 34025 NM_001002911 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr12-5122 chr12 98110097 98110307 + 9.66 0.000 Intergenic Intergenic -114754 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr2-12890 chr2 98683959 98684169 + 9.66 0.000 intron (NM_012214, intron 2 of 15) intron (NM_012214, intron 2 of 15) -20591 NM_001160154 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding chr6-3478 chr6 5525280 5525490 + 9.66 0.000 intron (NM_006567, intron 4 of 6) intron (NM_006567, intron 4 of 6) -67310 NR_125847 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA chr2-9447 chr2 233968626 233968836 + 9.66 0.000 intron (NM_024080, intron 15 of 25) intron (NM_024080, intron 15 of 25) 51358 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|LTrpC-6|TRPP8|trp-p8 transient receptor potential cation channel subfamily M member 8 protein-coding chr5-5514 chr5 143457277 143457487 + 9.66 0.000 Intergenic L2b|LINE|L2 -21870 NM_001018077 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr17-6446 chr17 12258423 12258633 + 9.66 0.000 Intergenic Intergenic 176629 NR_030613 100126313 NR_030613 ENSG00000266297 MIR744 MIRN744|hsa-mir-744|mir-744 microRNA 744 ncRNA chr14-1893 chr14 99017512 99017722 + 9.66 0.000 Intergenic Intergenic 254580 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr2-14747 chr2 239473675 239473885 + 9.66 0.000 Intergenic Intergenic 72032 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr3-7093 chr3 179948344 179948554 + 9.66 0.000 intron (NM_001349396, intron 1 of 13) intron (NM_001349396, intron 1 of 13) 25776 NR_146167 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr4-7126 chr4 36336200 36336410 + 9.66 0.000 intron (NM_001170700, intron 8 of 9) intron (NM_001170700, intron 8 of 9) 54689 NR_160267 401124 Hs.363407 NM_001136536 ENSG00000197057 DTHD1 - death domain containing 1 protein-coding chr8-3328 chr8 32983220 32983430 + 9.66 0.000 Intergenic L2a|LINE|L2 261490 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr19-5508 chr19 46356311 46356521 + 9.66 0.000 intron (NM_001204284, intron 2 of 11) intron (NM_001204284, intron 2 of 11) 9329 NM_006247 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr8-6093 chr8 27176265 27176475 + 9.66 0.000 Intergenic Intergenic 82034 NM_001283054 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding chr22-4078 chr22 42955612 42955822 + 9.66 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 4139 NM_001349973 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr10-2355 chr10 87775807 87776017 + 9.66 0.000 intron (NM_001321967, intron 6 of 9) intron (NM_001321967, intron 6 of 9) 42319 NM_001321969 84896 Hs.435948 NM_032810 ENSG00000138138 ATAD1 AFDC1|FNP001|HKPX4|THORASE ATPase family AAA domain containing 1 protein-coding chr13-1001 chr13 113421395 113421605 + 9.66 0.000 TTS (NM_138430) TTS (NM_138430) -7107 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr7-2485 chr7 6511465 6511675 + 9.66 0.000 intron (NM_001145118, intron 8 of 21) AluSq|SINE|Alu -27418 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr2-8754 chr2 162217614 162217824 + 9.66 0.000 intron (NM_004460, intron 9 of 25) intron (NM_004460, intron 9 of 25) 25726 NM_001291807 2191 Hs.654370 NM_004460 ENSG00000078098 FAP DPPIV|FAPA|FAPalpha|SIMP fibroblast activation protein alpha protein-coding chr5-3049 chr5 21937793 21938003 + 9.66 0.000 intron (NM_004061, intron 6 of 14) MER76|LTR|ERVL -48051 NM_001364109 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr7-1871 chr7 43905232 43905442 + 9.66 0.000 intron (NM_001077664, intron 1 of 5) intron (NM_001077664, intron 1 of 5) 1259 NM_001204871 100534592 NM_001204871 ENSG00000270617 URGCP-MRPS24 - URGCP-MRPS24 readthrough protein-coding chr17-4253 chr17 50792104 50792314 + 9.66 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR 23559 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr12-2181 chr12 2878462 2878672 + 9.66 0.000 intron (NR_027365, intron 1 of 1) L2b|LINE|L2 1344 NR_027365 83695 Hs.198853 NM_001252499 ENSG00000171792 RHNO1 C12orf32|HKMT1188|RHINO RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding chr2-10601 chr2 3172048 3172258 + 9.66 0.000 Intergenic Intergenic -46127 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr9-3314 chr9 88359028 88359238 + 9.66 0.000 Intergenic Intergenic -29311 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr5-3300 chr5 121741109 121741319 + 9.66 0.000 Intergenic Intergenic -110668 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr8-3379 chr8 57320245 57320455 + 9.66 0.000 Intergenic L1P1|LINE|L1 -23437 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr2-10819 chr2 51759795 51760005 + 9.66 0.000 intron (NR_135237, intron 5 of 10) intron (NR_135237, intron 5 of 10) -610748 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr7-2260 chr7 1385200 1385410 + 9.66 0.000 Intergenic Intergenic 74165 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr12-7669 chr12 84585906 84586116 + 9.66 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 326788 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr1-6693 chr1 53729740 53729950 + 9.66 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 4359 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr4-4402 chr4 43416510 43416720 + 9.66 0.000 Intergenic THE1D|LTR|ERVL-MaLR 75928 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr8-3097 chr8 30020257 30020467 + 9.66 0.000 Intergenic Intergenic 62702 NM_016127 51669 Hs.521487 NM_016127 ENSG00000133872 SARAF FOAP-7|HSPC035|TMEM66|XTP3 store-operated calcium entry associated regulatory factor protein-coding chr2-4152 chr2 175855877 175856087 + 9.66 0.000 Intergenic Intergenic 146285 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chrX-1088 chrX 3089079 3089289 + 9.66 0.000 intron (NM_004042, intron 6 of 10) LTR26|LTR|ERV1 22385 NM_004042 416 Hs.101674 NM_004042 ENSG00000062096 ARSF ASF arylsulfatase F protein-coding chr8-1676 chr8 41798286 41798496 + 9.66 0.000 promoter-TSS (NM_020476) promoter-TSS (NM_020476) -769 NM_020476 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr8-4953 chr8 118499012 118499222 + 9.66 0.000 intron (NM_001101676, intron 2 of 4) MLT1I|LTR|ERVL-MaLR -121884 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr12-1838 chr12 29149208 29149418 + 9.66 0.000 promoter-TSS (NM_001271783) promoter-TSS (NM_001271783) 35 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr8-7212 chr8 126503750 126503960 + 9.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 54623 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr1-14635 chr1 56710735 56710945 + 9.66 0.000 3' UTR (NM_006252, exon 9 of 9) 3' UTR (NM_006252, exon 9 of 9) -65522 NR_135111 101929935 NR_135111 LOC101929935 - uncharacterized LOC101929935 ncRNA chr16-4841 chr16 87784943 87785153 + 9.66 0.000 Intergenic Intergenic -5900 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA chr7-5893 chr7 94436239 94436449 + 9.66 0.000 Intergenic Intergenic 41783 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr1-10134 chr1 103002968 103003178 + 9.66 0.000 intron (NM_001854, intron 21 of 66) intron (NM_001854, intron 21 of 66) 105423 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr13-3966 chr13 62274425 62274635 + 9.66 0.000 Intergenic LTR12|LTR|ERV1 -46775 NR_149075 106144607 Hs.562580 NR_149075 ENSG00000227611 LINC01074 - long intergenic non-protein coding RNA 1074 ncRNA chr17-4766 chr17 43979001 43979211 + 9.66 0.000 intron (NM_004160, intron 1 of 6) intron (NM_004160, intron 1 of 6) 25363 NM_004160 5697 Hs.169249 NM_004160 ENSG00000131096 PYY PYY-I|PYY1 peptide YY protein-coding chr2-2012 chr2 74124103 74124313 + 9.66 0.000 Intergenic SVA_B|Retroposon|SVA 23704 NM_001035505 388962 Hs.61472 NM_212552 ENSG00000163170 BOLA3 MMDS2 bolA family member 3 protein-coding chrX-4313 chrX 44472693 44472903 + 9.66 0.000 Intergenic Intergenic 70061 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr20-1928 chr20 12748626 12748836 + 9.66 0.000 Intergenic Intergenic 188232 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr17-2247 chr17 8013822 8014032 + 9.66 0.000 exon (NM_000180, exon 12 of 20) exon (NM_000180, exon 12 of 20) 11257 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr11-6431 chr11 66210470 66210680 + 9.66 0.000 intron (NM_018026, intron 3 of 23) intron (NM_018026, intron 3 of 23) -46719 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr7-8504 chr7 52567944 52568154 + 9.66 0.000 Intergenic MER1B|DNA|hAT-Charlie -467584 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr9-7013 chr9 116434562 116434772 + 9.66 0.000 intron (NM_014010, intron 21 of 21) intron (NM_014010, intron 21 of 21) -34061 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr5-1800 chr5 61000950 61001160 + 9.66 0.000 intron (NM_174889, intron 1 of 3) intron (NM_174889, intron 1 of 3) 55850 NM_174889 91942 Hs.591757 NM_174889 ENSG00000164182 NDUFAF2 B17.2L|MC1DN10|MMTN|NDUFA12L|mimitin NADH:ubiquinone oxidoreductase complex assembly factor 2 protein-coding chrX-759 chrX 22134963 22135173 + 9.66 0.000 intron (NM_001282754, intron 12 of 20) intron (NM_001282754, intron 12 of 20) 37915 NR_046639 100873942 Hs.633194 NR_046639 ENSG00000224204 PHEX-AS1 - PHEX antisense RNA 1 ncRNA chr13-1782 chr13 18628771 18628981 + 9.66 0.000 Intergenic CpG 111223 NR_047508 100874164 Hs.739604 NR_047508 LINC00417 - long intergenic non-protein coding RNA 417 ncRNA chr21-1421 chr21 15094944 15095154 + 9.66 0.000 Intergenic Intergenic -30049 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr15-1439 chr15 70557634 70557844 + 9.66 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 28867 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA chr3-6913 chr3 157329732 157329942 + 9.66 0.000 intron (NM_024621, intron 9 of 13) intron (NM_024621, intron 9 of 13) -107013 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr5-3563 chr5 61289621 61289831 + 9.66 0.000 Intergenic Intergenic -24797 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr3-4244 chr3 141429752 141429962 + 9.66 0.000 intron (NM_001350100, intron 3 of 3) L2a|LINE|L2 27508 NM_001350100 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr4-7950 chr4 110128701 110128911 + 9.66 0.000 intron (NM_001130721, intron 2 of 4) intron (NM_001130721, intron 2 of 4) 69809 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr17-2636 chr17 7192028 7192238 + 9.66 0.000 intron (NM_001369566, intron 16 of 18) intron (NM_001369566, intron 16 of 18) -12569 NM_001197216 432 Hs.12056 NM_001671 ENSG00000141505 ASGR1 ASGPR|ASGPR1|CLEC4H1|HL-1 asialoglycoprotein receptor 1 protein-coding chr4-4565 chr4 74600103 74600313 + 9.66 0.000 Intergenic L1PREC2|LINE|L1 155072 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr1-5872 chr1 2905690 2905900 + 9.66 0.000 Intergenic Intergenic -104927 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr4-5273 chr4 174490563 174490773 + 9.66 0.000 3' UTR (NM_001256301, exon 7 of 7) 3' UTR (NM_001256301, exon 7 of 7) 31820 NM_000860 3248 Hs.596913 NM_000860 ENSG00000164120 HPGD 15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1 15-hydroxyprostaglandin dehydrogenase protein-coding chr3-5228 chr3 89580464 89580674 + 9.66 0.000 Intergenic Intergenic 472948 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr5-2484 chr5 145362351 145362561 + 9.66 0.000 Intergenic L2a|LINE|L2 472886 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr17-6290 chr17 44589251 44589461 + 9.66 0.000 Intergenic Intergenic 31872 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr14-2911 chr14 38988013 38988223 + 9.66 0.000 Intergenic Intergenic -71236 NR_039982 283547 Hs.675941 NR_039982 ENSG00000259070 LINC00639 - long intergenic non-protein coding RNA 639 ncRNA chr9-5127 chr9 36218370 36218580 + 9.66 0.000 intron (NM_005476, intron 10 of 11) intron (NM_005476, intron 10 of 11) 27554 NM_001076677 1211 Hs.522114 NM_001833 ENSG00000122705 CLTA LCA clathrin light chain A protein-coding chrX-1898 chrX 135089689 135089899 + 9.66 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 8918 NM_001348255 644596 Hs.656427 NM_001348255 ENSG00000196972 SMIM10L2B LINC00086|LINC00087|NCRNA00086|NCRNA00087|SMIM10L2A small integral membrane protein 10 like 2B protein-coding chr12-7673 chr12 85834140 85834350 + 9.66 0.000 intron (NM_005447, intron 1 of 1) intron (NM_005447, intron 1 of 1) 2164 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr11-8463 chr11 116645266 116645476 + 9.66 0.000 intron (NR_135069, intron 1 of 2) MIRb|SINE|MIR 5949 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr12-6998 chr12 30943569 30943779 + 9.66 0.000 intron (NM_001370301, intron 1 of 6) MIR3|SINE|MIR 16770 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr17-6856 chr17 21174200 21174410 + 9.66 0.000 intron (NM_015510, intron 2 of 6) (TGTCTCT)n|Simple_repeat|Simple_repeat 8118 NM_001330159 25979 Hs.386989 NM_015510 ENSG00000109016 DHRS7B CGI-93|SDR32C1 dehydrogenase/reductase 7B protein-coding chr11-2812 chr11 120180613 120180823 + 9.66 0.000 Intergenic MIRb|SINE|MIR 11741 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chr11-5912 chr11 13995108 13995318 + 9.66 0.000 intron (NM_006108, intron 2 of 15) L2a|LINE|L2 32490 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chrX-1382 chrX 153628310 153628520 + 9.66 0.000 Intergenic Intergenic -14026 NM_001395 1852 Hs.144879 NM_001395 ENSG00000130829 DUSP9 MKP-4|MKP4 dual specificity phosphatase 9 protein-coding chr8-4067 chr8 65499501 65499711 + 9.66 0.000 Intergenic Intergenic 63060 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr9-7101 chr9 129575004 129575214 + 9.66 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -33775 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr7-3574 chr7 22430580 22430790 + 9.66 0.000 intron (NM_207342, intron 4 of 4) intron (NM_207342, intron 4 of 4) 69597 NM_001164460 256227 Hs.729825 NM_207342 ENSG00000105889 STEAP1B - STEAP family member 1B protein-coding chr1-8446 chr1 103155013 103155223 + 9.66 0.000 Intergenic L1M3|LINE|L1 -46596 NM_080630 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr2-5114 chr2 20025460 20025670 + 9.66 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -12897 NM_002381 4148 Hs.656199 NM_002381 ENSG00000132031 MATN3 DIPOA|EDM5|HOA|OADIP|OS2 matrilin 3 protein-coding chr6-8012 chr6 117268047 117268257 + 9.66 0.000 intron (NM_153453, intron 1 of 2) intron (NM_153453, intron 1 of 2) 2594 NM_182645 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr8-2841 chr8 130577389 130577599 + 9.66 0.000 Intergenic Intergenic -133820 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr2-5689 chr2 204021570 204021780 + 9.66 0.000 Intergenic Intergenic 84927 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr2-9590 chr2 241127168 241127378 + 9.66 0.000 exon (NM_001252120, exon 11 of 19) exon (NM_001252120, exon 11 of 19) 22199 NM_015148 23178 Hs.397891 NM_015148 ENSG00000115687 PASK PASKIN|STK37 PAS domain containing serine/threonine kinase protein-coding chr19-4450 chr19 4798852 4799062 + 9.66 0.000 3' UTR (NM_018708, exon 1 of 1) 3' UTR (NM_018708, exon 1 of 1) 7223 NM_018708 55527 Hs.515082 NM_018708 ENSG00000141965 FEM1A EPRAP fem-1 homolog A protein-coding chr8-4568 chr8 127452743 127452953 + 9.66 0.000 intron (NR_024393, intron 4 of 4) intron (NR_024393, intron 4 of 4) 29291 NR_117100 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chrX-2936 chrX 153557422 153557632 + 9.66 0.000 intron (NM_001001344, intron 14 of 19) intron (NM_001001344, intron 14 of 19) 21405 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chrX-3983 chrX 13982226 13982436 + 9.66 0.000 Intergenic MER57-int|LTR|ERV1 -43507 NM_001318729 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr16-1750 chr16 85227787 85227997 + 9.66 0.000 Intergenic L2b|LINE|L2 20096 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr18-2114 chr18 51610833 51611043 + 9.66 0.000 Intergenic Intergenic 218896 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr2-8894 chr2 178833519 178833729 + 9.66 0.000 3' UTR (NM_173648, exon 24 of 24) 3' UTR (NM_173648, exon 24 of 24) -26201 NM_001256850 7273 Hs.134602 NM_003319 ENSG00000155657 TTN CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|LGMDR10|MYLK5|SALMY|TMD titin protein-coding chr7-4452 chr7 130182134 130182344 + 9.66 0.000 intron (NR_156699, intron 8 of 14) AluSq2|SINE|Alu 23167 NM_032842 84928 Hs.267245 NM_032842 ENSG00000146842 TMEM209 NET31 transmembrane protein 209 protein-coding chr12-7081 chr12 43081592 43081802 + 9.66 0.000 Intergenic Intergenic -73618 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr10-4904 chr10 21424719 21424929 + 9.66 0.000 Intergenic Intergenic -51874 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr10-5578 chr10 90545983 90546193 + 9.66 0.000 Intergenic HERVL-int|LTR|ERVL -5283 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr8-4149 chr8 76136032 76136242 + 9.66 0.000 Intergenic Intergenic -270517 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr1-8266 chr1 36069362 36069572 + 9.66 0.000 3' UTR (NM_024852, exon 19 of 19) 3' UTR (NM_024852, exon 19 of 19) -14627 NM_014466 27285 Hs.127111 NM_014466 ENSG00000092850 TEKT2 TEKTB1|TEKTIN-T|h-tektin-t tektin 2 protein-coding chr2-13914 chr2 182352257 182352467 + 9.66 0.000 intron (NM_005019, intron 1 of 14) LTR40c|LTR|ERVL 74686 NM_001363871 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr5-2595 chr5 102554160 102554370 + 9.66 0.000 Intergenic Intergenic -27103 NR_047462 100861468 Hs.519483 NR_047462 ENSG00000250958 LINC00492 - long intergenic non-protein coding RNA 492 ncRNA chr11-4166 chr11 50205507 50205717 + 9.66 0.000 Intergenic AluSc8|SINE|Alu 92850 NR_003034 441601 Hs.144683 NR_003034 ENSG00000255042 LOC441601 - septin 7 pseudogene pseudo chr2-3688 chr2 202494323 202494533 + 9.66 0.000 intron (NM_001204, intron 3 of 12) intron (NM_001204, intron 3 of 12) 118101 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr20-2954 chr20 31487418 31487628 + 9.66 0.000 TTS (NR_024358) TTS (NR_024358) 1745 NR_024358 140875 Hs.283478 NR_024358 ENSG00000233354 LINC00028 C20orf93|NCRNA00028|dJ1093G12.6 long intergenic non-protein coding RNA 28 ncRNA chr20-3346 chr20 30304331 30304541 + 9.66 0.000 Intergenic Intergenic -17899 NR_145432 400841 Hs.516959 NM_207470 LINC01597 - long intergenic non-protein coding RNA 1597 ncRNA chr11-4067 chr11 18550217 18550427 + 9.66 0.000 intron (NM_001040697, intron 7 of 11) intron (NM_001040697, intron 7 of 11) -23380 NM_006292 7251 Hs.523512 NM_006292 ENSG00000074319 TSG101 TSG10|VPS23 tumor susceptibility 101 protein-coding chr19-5042 chr19 49066819 49067029 + 9.66 0.000 TTS (NM_031886) TTS (NM_031886) -3057 NM_006179 4909 Hs.266902 NM_006179 ENSG00000225950 NTF4 GLC10|GLC1O|NT-4|NT-4/5|NT-5|NT4|NT5|NTF5 neurotrophin 4 protein-coding chr7-3368 chr7 100682635 100682845 + 9.66 0.000 exon (NM_022574, exon 20 of 24) exon (NM_022574, exon 20 of 24) 6708 NM_022574 64599 Hs.414396 NM_022574 ENSG00000146830 GIGYF1 GYF1|PERQ1 GRB10 interacting GYF protein 1 protein-coding chr11-3547 chr11 19903511 19903721 + 9.66 0.000 intron (NM_182964, intron 6 of 37) intron (NM_182964, intron 6 of 37) -118940 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr21-947 chr21 42819730 42819940 + 9.66 0.000 Intergenic AluSx1|SINE|Alu -39841 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr14-2268 chr14 23566769 23566979 + 9.66 0.000 non-coding (NR_110555, exon 3 of 4) non-coding (NR_110555, exon 3 of 4) 917 NM_001354674 8906 Hs.343244 NM_003917 ENSG00000213983 AP1G2 G2AD adaptor related protein complex 1 subunit gamma 2 protein-coding chr1-11018 chr1 220803765 220803975 + 9.66 0.000 intron (NM_022746, intron 4 of 6) intron (NM_022746, intron 4 of 6) 16957 NM_022746 64757 Hs.497816 NM_022746 ENSG00000186205 MARC1 MOSC1 mitochondrial amidoxime reducing component 1 protein-coding chr14-3009 chr14 54253549 54253759 + 9.66 0.000 Intergenic Intergenic -143214 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr20-1266 chr20 44495066 44495276 + 9.66 0.000 TTS (NM_024331) TTS (NM_024331) 19297 NM_001261839 79183 Hs.283869 NM_024331 ENSG00000124120 TTPAL C20orf121 alpha tocopherol transfer protein like protein-coding chr4-4796 chr4 103749569 103749779 + 9.66 0.000 Intergenic LOR1a|LTR|ERV1 -29689 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr6-3926 chr6 78497009 78497219 + 9.66 0.000 Intergenic Intergenic 42195 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr4-5497 chr4 79534498 79534708 + 9.66 0.000 intron (NR_038826, intron 3 of 3) intron (NR_038826, intron 3 of 3) 42010 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr7-7799 chr7 2151642 2151852 + 9.66 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) -62695 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chrX-691 chrX 44450735 44450945 + 9.66 0.000 Intergenic Intergenic 92019 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chrX-3407 chrX 9760477 9760687 + 9.66 0.000 intron (NM_000273, intron 2 of 8) MER5A|DNA|hAT-Charlie 5265 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr3-5145 chr3 55426679 55426889 + 9.66 0.000 Intergenic Intergenic 54614 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr1-7701 chr1 24123921 24124131 + 9.66 0.000 intron (NM_021258, intron 5 of 6) MER115|DNA|hAT-Tip100 -11891 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr2-10863 chr2 63828298 63828508 + 9.66 0.000 Intergenic L2a|LINE|L2 -12561 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr10-5156 chr10 53806525 53806735 + 9.66 0.000 exon (NM_001354420, exon 34 of 34) exon (NM_001354420, exon 34 of 34) -679600 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr11-5782 chr11 5172066 5172276 + 9.66 0.000 Intergenic Intergenic 6540 NM_001348257 283110 NM_001348257 OR52Z1 OR52Z1P olfactory receptor family 52 subfamily Z member 1 (gene/pseudogene) protein-coding chr12-5044 chr12 88361569 88361779 + 9.66 0.000 Intergenic MER44C|DNA|TcMar-Tigger 218797 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr22-2850 chr22 44675298 44675508 + 9.66 0.000 intron (NM_001017529, intron 1 of 7) intron (NM_001017529, intron 1 of 7) -1405 NM_001017530 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr4-5090 chr4 147492873 147493083 + 9.66 0.000 intron (NM_001166055, intron 2 of 5) intron (NM_001166055, intron 2 of 5) 11881 NR_148963 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr7-6499 chr7 11619272 11619482 + 9.66 0.000 intron (NM_015204, intron 2 of 26) intron (NM_015204, intron 2 of 26) 212821 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr8-3008 chr8 117440312 117440522 + 9.66 0.000 Intergenic Intergenic -80296 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr15-1585 chr15 75759773 75759983 + 9.66 0.000 Intergenic Intergenic 2437 NR_036198 100423035 NR_036198 ENSG00000284385 MIR4313 - microRNA 4313 ncRNA chr9-2385 chr9 127613078 127613288 + 9.66 0.000 intron (NM_001032221, intron 1 of 18) CpG 906 NM_001032221 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr3-2441 chr3 42084821 42085031 + 9.66 0.000 Intergenic Intergenic -2274 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr5-4403 chr5 180602395 180602605 + 9.66 0.000 3' UTR (NM_182925, exon 30 of 30) 3' UTR (NM_182925, exon 30 of 30) -11001 NM_052863 92304 Hs.62492 NM_052863 ENSG00000161055 SCGB3A1 HIN-1|HIN1|LU105|PnSP-2|UGRP2 secretoglobin family 3A member 1 protein-coding chr17-3634 chr17 3653921 3654131 + 9.66 0.000 intron (NM_001031681, intron 5 of 12) intron (NM_001031681, intron 5 of 12) 14552 NM_014604 30851 Hs.12956 NM_014604 ENSG00000213977 TAX1BP3 TIP-1|TIP1 Tax1 binding protein 3 protein-coding chrX-1787 chrX 79253623 79253833 + 9.66 0.000 Intergenic Intergenic 82756 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr11-3936 chr11 133479661 133479871 + 9.66 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) 52735 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chrX-579 chrX 72305119 72305329 + 9.66 0.000 intron (NM_001144886, intron 1 of 2) CpG 690 NM_001144885 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr11-6067 chr11 32360600 32360810 + 9.66 0.000 Intergenic L1MB5|LINE|L1 39695 NM_001367854 7490 Hs.591980 NM_000378 ENSG00000184937 WT1 AWT1|GUD|NPHS4|WAGR|WIT-2|WT33 WT1 transcription factor protein-coding chr15-5047 chr15 84659566 84659776 + 9.66 0.000 Intergenic Intergenic -1472 NM_021077 4828 Hs.386470 NM_021077 ENSG00000197696 NMB - neuromedin B protein-coding chr3-4286 chr3 156389466 156389676 + 9.66 0.000 intron (NM_172159, intron 1 of 13) MER5A|DNA|hAT-Charlie 57365 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr8-2039 chr8 110079435 110079645 + 9.66 0.000 Intergenic L1PA4|LINE|L1 -103769 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr2-13234 chr2 124836639 124836849 + 9.66 0.000 intron (NM_130773, intron 19 of 23) intron (NM_130773, intron 19 of 23) 811457 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr13-2259 chr13 27009262 27009472 + 9.66 0.000 Intergenic L1MC5a|LINE|L1 -116166 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr11-8837 chr11 12525942 12526152 + 9.66 0.000 intron (NM_018222, intron 12 of 12) L1PB3|LINE|L1 -148374 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr4-5294 chr4 176883594 176883804 + 9.66 0.000 Intergenic Intergenic 7997 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr22-2942 chr22 48044747 48044957 + 9.66 0.000 Intergenic Intergenic -229512 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr2-5130 chr2 24263873 24264083 + 9.66 0.000 intron (NM_001348182, intron 19 of 38) L1MB8|LINE|L1 88925 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr17-1036 chr17 64918897 64919107 + 9.66 0.000 intron (NM_199340, intron 1 of 14) (CGG)n|Simple_repeat|Simple_repeat 489 NM_001303255 374819 Hs.551962 NM_199340 ENSG00000176809 LRRC37A3 LRRC37|LRRC37A leucine rich repeat containing 37 member A3 protein-coding chr12-2699 chr12 108806770 108806980 + 9.66 0.000 intron (NM_018984, intron 8 of 14) L3|LINE|CR1 20676 NM_001161331 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr6-4774 chr6 74283069 74283279 + 9.66 0.000 intron (NR_110856, intron 1 of 3) intron (NR_110856, intron 1 of 3) 213723 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr1-7208 chr1 218346866 218347076 + 9.66 0.000 exon (NM_001135599, exon 1 of 8) exon (NM_001135599, exon 1 of 8) -1293 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA chr9-2480 chr9 71349270 71349480 + 9.66 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) 97596 NM_001366143 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr11-5459 chr11 74096016 74096226 + 9.66 0.000 intron (NM_001286577, intron 16 of 32) MIR|SINE|MIR 74881 NM_015531 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 domain containing 3 centriole elongation regulator protein-coding chr17-1636 chr17 17476831 17477041 + 9.66 0.000 promoter-TSS (NM_018019) promoter-TSS (NM_018019) -64 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr22-1641 chr22 37040888 37041098 + 9.66 0.000 Intergenic L1MC4|LINE|L1 -10743 NM_001282685 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr4-3151 chr4 181903618 181903828 + 9.66 0.000 Intergenic Intergenic -73750 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr15-2054 chr15 57706969 57707179 + 9.66 0.000 intron (NM_001018102, intron 1 of 3) CpG 360 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr15-3571 chr15 42050877 42051087 + 9.66 0.000 promoter-TSS (NM_001206670) promoter-TSS (NM_001206670) -279 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chrX-2527 chrX 97684653 97684863 + 9.66 0.000 Intergenic Chap1_Mam|DNA|hAT-Charlie -120223 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr14-1076 chr14 104940837 104941047 + 9.66 0.000 exon (NM_138420, exon 7 of 7) exon (NM_138420, exon 7 of 7) 16063 NM_001308174 122618 Hs.407101 NM_138790 ENSG00000166428 PLD4 C14orf175 phospholipase D family member 4 protein-coding chr4-3752 chr4 84155074 84155284 + 9.66 0.000 intron (NR_125909, intron 5 of 8) intron (NR_125909, intron 5 of 8) 143990 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr8-2773 chr8 118018527 118018737 + 9.66 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 93187 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr10-6959 chr10 66182954 66183164 + 9.66 0.000 intron (NM_001127384, intron 13 of 17) intron (NM_001127384, intron 13 of 17) 611634 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA KI270927.1-1 KI270927.1 88665 88875 + 9.66 0.000 NA NA NA NA chr1-5486 chr1 145716342 145716552 + 9.66 0.000 Intergenic Intergenic -3052 NM_007053 11126 Hs.488237 NM_007053 ENSG00000117281 CD160 BY55|NK1|NK28 CD160 molecule protein-coding chr8-2402 chr8 66129921 66130131 + 9.66 0.000 intron (NM_184085, intron 2 of 9) intron (NM_184085, intron 2 of 9) 2897 NM_184085 84675 Hs.85524 NM_033058 ENSG00000147573 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding chr5-4863 chr5 64639809 64640019 + 9.66 0.000 Intergenic Intergenic -50589 NM_001164442 100132916 Hs.591776 NM_001164442 ENSG00000145642 SHISAL2B FAM159B shisa like 2B protein-coding chr1-11805 chr1 27198138 27198348 + 9.66 0.000 Intergenic MIRc|SINE|MIR -36389 NM_015023 23038 Hs.469154 NM_015023 ENSG00000142784 WDTC1 ADP|DCAF9 WD and tetratricopeptide repeats 1 protein-coding chr16-3491 chr16 3547331 3547541 + 9.66 0.000 intron (NR_075083, intron 16 of 20) L1MB8|LINE|L1 29967 NR_075083 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chr1-2309 chr1 52698239 52698449 + 9.66 0.000 promoter-TSS (NM_023077) promoter-TSS (NM_023077) 3 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chr16-4072 chr16 1933677 1933887 + 9.66 0.000 Intergenic ERVL-B4-int|LTR|ERVL 9544 NM_016332 51734 Hs.655346 NM_016332 ENSG00000198736 MSRB1 HSPC270|SELR|SELX|SEPX1|SepR methionine sulfoxide reductase B1 protein-coding chr12-3594 chr12 50597171 50597381 + 9.66 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 92291 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr4-5854 chr4 114602996 114603206 + 9.66 0.000 intron (NM_001322114, intron 1 of 5) L2a|LINE|L2 3816 NM_001322114 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr13-4011 chr13 71267351 71267561 + 9.66 0.000 Intergenic L1ME3A|LINE|L1 252315 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr11-5790 chr11 5689750 5689960 + 9.66 0.000 promoter-TSS (NM_006074) promoter-TSS (NM_006074) 65 NM_006074 10346 Hs.501778 NM_006074 ENSG00000132274 TRIM22 GPSTAF50|RNF94|STAF50 tripartite motif containing 22 protein-coding chr7-4366 chr7 66602296 66602506 + 9.66 0.000 Intergenic Intergenic -9994 NR_111975 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr19-6470 chr19 17281376 17281586 + 9.66 0.000 promoter-TSS (NM_001278444) promoter-TSS (NM_001278444) -420 NM_001278443 126549 Hs.721610 NM_152363 ENSG00000160117 ANKLE1 ANKRD41|LEM3|LEMD6 ankyrin repeat and LEM domain containing 1 protein-coding chr3-6097 chr3 52522395 52522605 + 9.66 0.000 intron (NM_015136, intron 60 of 68) intron (NM_015136, intron 60 of 68) 11357 NM_001134231 64943 Hs.84753 NM_022908 ENSG00000168268 NT5DC2 - 5'-nucleotidase domain containing 2 protein-coding chrX-812 chrX 72298950 72299160 + 9.66 0.000 Intergenic MLT2B1|LTR|ERVL 6859 NM_001144885 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr1-16541 chr1 232832357 232832567 + 9.66 0.000 Intergenic Intergenic 27570 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr8-1873 chr8 22123296 22123506 + 9.66 0.000 intron (NM_018411, intron 6 of 17) intron (NM_018411, intron 6 of 17) 7651 NM_005144 55806 Hs.272367 NM_005144 ENSG00000168453 HR ALUNC|AU|HSA277165|HYPT4|MUHH|MUHH1 HR lysine demethylase and nuclear receptor corepressor protein-coding chr18-3501 chr18 73969889 73970099 + 9.66 0.000 Intergenic L1ME2|LINE|L1 177840 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr11-5461 chr11 74429020 74429230 + 9.66 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 29888 NR_039710 100616215 NR_039710 ENSG00000264402 MIR548AL - microRNA 548al ncRNA chr4-2079 chr4 24471447 24471657 + 9.66 0.000 intron (NM_001330752, intron 1 of 13) CpG 1353 NR_148987 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr2-7809 chr2 45483980 45484190 + 9.66 0.000 intron (NM_018079, intron 15 of 20) HAL1|LINE|L1 127182 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr17-5834 chr17 66662142 66662352 + 9.66 0.000 intron (NM_002737, intron 5 of 16) intron (NM_002737, intron 5 of 16) -124825 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr13-1835 chr13 84850361 84850571 + 9.66 0.000 Intergenic Intergenic 66812 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr6-1658 chr6 150071036 150071246 + 9.66 0.000 Intergenic Intergenic -2020 NM_024518 79465 Hs.15422 NM_024518 ENSG00000131019 ULBP3 N2DL-3|NKG2DL3|RAET1N UL16 binding protein 3 protein-coding chr10-7018 chr10 77605473 77605683 + 9.66 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 32230 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chrX-2898 chrX 149514032 149514242 + 9.66 0.000 Intergenic Intergenic -8831 NR_104128 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr13-1687 chr13 77139276 77139486 + 9.66 0.000 intron (NM_015057, intron 51 of 82) intron (NM_015057, intron 51 of 82) 63867 NR_046716 100874212 Hs.569288 NR_046716 ENSG00000236051 MYCBP2-AS1 - MYCBP2 antisense RNA 1 ncRNA chr16-6002 chr16 7887821 7888031 + 9.66 0.000 Intergenic MIR3|SINE|MIR 555081 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr11-4416 chr11 86608363 86608573 + 9.66 0.000 intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 63730 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr12-3034 chr12 566348 566558 + 9.66 0.000 intron (NM_016533, intron 1 of 3) intron (NM_016533, intron 1 of 3) 20033 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr3-2194 chr3 10249255 10249465 + 9.66 0.000 exon (NM_014760, exon 2 of 8) exon (NM_014760, exon 2 of 8) 901 NM_014760 9797 Hs.475401 NM_014760 ENSG00000157014 TATDN2 - TatD DNase domain containing 2 protein-coding chr11-3037 chr11 2446080 2446290 + 9.66 0.000 intron (NM_000218, intron 1 of 15) intron (NM_000218, intron 1 of 15) 1194 NM_000218 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr20-778 chr20 49789804 49790014 + 9.66 0.000 Intergenic LTR16C|LTR|ERVL -22804 NM_001260491 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr8-4192 chr8 82124008 82124218 + 9.66 0.000 Intergenic Intergenic -281827 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr4-3446 chr4 94174606 94174816 + 9.66 0.000 intron (NR_125922, intron 1 of 8) AluSx|SINE|Alu 32845 NR_125922 101929210 Hs.518877 NR_125922 ENSG00000246541 LOC101929210 - uncharacterized LOC101929210 ncRNA chr9-7037 chr9 122443998 122444208 + 9.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 33823 NM_001004451 347168 Hs.632692 NM_001004451 ENSG00000136834 OR1J1 OR9-18|hg32 olfactory receptor family 1 subfamily J member 1 protein-coding chr4-1605 chr4 40344960 40345170 + 9.66 0.000 intron (NM_017581, intron 3 of 4) intron (NM_017581, intron 3 of 4) 9732 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chr3-10314 chr3 126646688 126646898 + 9.66 0.000 intron (NM_001173513, intron 2 of 14) L2b|LINE|L2 8331 NM_052883 114112 Hs.477475 NM_052883 ENSG00000197763 TXNRD3 TGR|TR2|TR2IT1|TRXR3|TXNRD3IT1|TXNRD3NB|TXNRD3NT1 thioredoxin reductase 3 protein-coding chrX-1996 chrX 13288181 13288391 + 9.66 0.000 intron (NR_146309, intron 1 of 1) MER39|LTR|ERV1 15166 NR_146309 109729169 Hs.348675 NR_146309 LINC02154 - long intergenic non-protein coding RNA 2154 ncRNA chr1-10183 chr1 110851297 110851507 + 9.66 0.000 Intergenic Intergenic -19797 NM_001040033 963 Hs.443057 NM_000560 ENSG00000143119 CD53 MOX44|TSPAN25 CD53 molecule protein-coding chr1-14202 chr1 34499911 34500121 + 9.66 0.000 Intergenic Intergenic 169678 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr11-4078 chr11 23148999 23149209 + 9.66 0.000 Intergenic Intergenic 270086 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr4-2952 chr4 105551981 105552191 + 9.66 0.000 promoter-TSS (NM_017700) promoter-TSS (NM_017700) -534 NM_001242729 54848 Hs.585224 NM_017700 ENSG00000236699 ARHGEF38 - Rho guanine nucleotide exchange factor 38 protein-coding chr22-2758 chr22 40272457 40272667 + 9.66 0.000 intron (NM_001162501, intron 6 of 22) intron (NM_001162501, intron 6 of 22) -73938 NM_001363840 158 Hs.75527 NM_000026 ENSG00000239900 ADSL AMPS|ASASE|ASL adenylosuccinate lyase protein-coding chr4-7657 chr4 85464526 85464736 + 9.66 0.000 Intergenic Intergenic -10519 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr20-715 chr20 56629134 56629344 + 9.66 0.000 promoter-TSS (NM_003222) promoter-TSS (NM_003222) -67 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr12-2940 chr12 90938621 90938831 + 9.66 0.000 non-coding (NR_038868, exon 2 of 5) non-coding (NR_038868, exon 2 of 5) 16450 NM_152638 196477 Hs.128574 NM_152638 ENSG00000197651 CCER1 C12orf12 coiled-coil glutamate rich protein 1 protein-coding chr2-10933 chr2 76377612 76377822 + 9.66 0.000 Intergenic LTR16A|LTR|ERVL -608248 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chrX-2664 chrX 115258536 115258746 + 9.66 0.000 Intergenic L2c|LINE|L2 -24545 NM_020871 57631 Hs.65366 NM_020871 ENSG00000130224 LRCH2 dA204F4.4 leucine rich repeats and calponin homology domain containing 2 protein-coding chr20-1956 chr20 33298025 33298235 + 9.66 0.000 intron (NM_033197, intron 7 of 15) intron (NM_033197, intron 7 of 15) 14916 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr7-4228 chr7 866985 867195 + 9.66 0.000 intron (NR_160282, intron 20 of 22) intron (NR_160282, intron 20 of 22) -9464 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 guided entry of tail-anchored proteins factor 4 protein-coding chr2-6310 chr2 67096331 67096541 + 9.66 0.000 intron (NR_110564, intron 1 of 4) intron (NR_110564, intron 1 of 4) 9990 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA chr3-4962 chr3 11524034 11524244 + 9.66 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 44659 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr5-2622 chr5 154862804 154863014 + 9.66 0.000 intron (NM_004779, intron 1 of 6) intron (NM_004779, intron 1 of 6) 4282 NM_001301073 9337 Hs.26703 NM_004779 ENSG00000155508 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex subunit 8 protein-coding chr14-2396 chr14 53331449 53331659 + 9.66 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 178200 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr19-2483 chr19 4717460 4717670 + 9.66 0.000 intron (NM_139159, intron 3 of 21) intron (NM_139159, intron 3 of 21) 6277 NM_139159 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr8-6254 chr8 40916008 40916218 + 9.66 0.000 Intergenic Intergenic -18287 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr15-2154 chr15 76865935 76866145 + 9.66 0.000 intron (NR_148227, intron 2 of 32) intron (NR_148227, intron 2 of 32) -4096 NM_001145923 49855 Hs.458986 NM_020843 ENSG00000140386 SCAPER IDDRP|MSTP063|ZNF291|Zfp291 S-phase cyclin A associated protein in the ER protein-coding chr14-2900 chr14 37515931 37516141 + 9.66 0.000 intron (NM_138731, intron 13 of 13) intron (NM_138731, intron 13 of 13) 79213 NM_004496 3169 Hs.163484 NM_004496 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding chr5-3509 chr5 178164180 178164390 + 9.66 0.000 Intergenic Intergenic -10325 NM_001034833 55651 Hs.744074 NM_017838 ENSG00000145912 NHP2 DKCB2|NHP2P|NOLA2 NHP2 ribonucleoprotein protein-coding chr3-6259 chr3 69996727 69996937 + 9.66 0.000 Intergenic Intergenic -2912 NR_110000 101927152 Hs.382046 NR_110000 ENSG00000240405 SAMMSON LINC01212 survival associated mitochondrial melanoma specific oncogenic non-coding RNA ncRNA chr2-11461 chr2 229835817 229836027 + 9.66 0.000 3' UTR (NM_001348334, exon 7 of 7) 3' UTR (NM_001348334, exon 7 of 7) 85757 NM_001348334 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr1-6221 chr1 217272598 217272808 + 9.66 0.000 Intergenic Intergenic -135001 NM_001350124 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr1-5687 chr1 47779594 47779804 + 9.66 0.000 intron (NM_001194986, intron 4 of 6) intron (NM_001194986, intron 4 of 6) 217686 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr5-5292 chr5 125111798 125112008 + 9.66 0.000 intron (NR_109882, intron 2 of 5) L2b|LINE|L2 75072 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr12-5485 chr12 125087865 125088075 + 9.66 0.000 intron (NM_001319839, intron 4 of 16) intron (NM_001319839, intron 4 of 16) 22535 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr11-4861 chr11 31777703 31777913 + 9.66 0.000 intron (NM_001288725, intron 10 of 10) intron (NM_001288725, intron 10 of 10) 22853 NM_001368930 5080 Hs.270303 NM_000280 ENSG00000007372 PAX6 AN|AN2|ASGD5|D11S812E|FVH1|MGDA|WAGR paired box 6 protein-coding chr7-2785 chr7 75467735 75467945 + 9.66 0.000 intron (NR_160303, intron 4 of 4) L2a|LINE|L2 18459 NR_160303 100101267 Hs.712563 NM_001099415 ENSG00000272391 POM121C POM121-2 POM121 transmembrane nucleoporin C protein-coding chrX-575 chrX 63666280 63666490 + 9.66 0.000 intron (NM_001353921, intron 6 of 9) (GA)n|Simple_repeat|Simple_repeat 5117 NR_138419 100874355 Hs.671524 NR_138419 ENSG00000231729 ARHGEF9-IT1 - ARHGEF9 intronic transcript 1 ncRNA chr6-1557 chr6 156808383 156808593 + 9.66 0.000 intron (NM_020732, intron 1 of 19) intron (NM_020732, intron 1 of 19) -28757 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr2-8289 chr2 102850997 102851207 + 9.66 0.000 Intergenic Intergenic 44620 NR_135562 105373518 Hs.738351 NR_135562 ENSG00000277527 LINC01796 - long intergenic non-protein coding RNA 1796 ncRNA chr2-13253 chr2 126996240 126996450 + 9.66 0.000 Intergenic LTR60B|LTR|ERV1 85720 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr1-3668 chr1 117051551 117051761 + 9.66 0.000 intron (NR_110786, intron 1 of 3) L2a|LINE|L2 7834 NR_110786 101929099 Hs.559118 NR_110786 ENSG00000236137 LOC101929099 - uncharacterized LOC101929099 ncRNA chr5-5537 chr5 145961331 145961541 + 9.66 0.000 intron (NM_152550, intron 2 of 9) intron (NM_152550, intron 2 of 9) 24858 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr10-5815 chr10 110068065 110068275 + 9.66 0.000 intron (NM_001121, intron 1 of 13) intron (NM_001121, intron 1 of 13) -59789 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr3-3575 chr3 53692495 53692705 + 9.66 0.000 intron (NM_000720, intron 8 of 48) intron (NM_000720, intron 8 of 48) 153819 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr14-4253 chr14 103001369 103001579 + 9.66 0.000 intron (NM_006035, intron 4 of 36) intron (NM_006035, intron 4 of 36) 56075 NM_006035 9578 Hs.654634 NM_006035 ENSG00000198752 CDC42BPB MRCKB CDC42 binding protein kinase beta protein-coding chr12-4613 chr12 40254039 40254249 + 9.66 0.000 intron (NM_198578, intron 11 of 50) intron (NM_198578, intron 11 of 50) 29147 NM_198578 120892 Hs.187636 NM_198578 ENSG00000188906 LRRK2 AURA17|DARDARIN|PARK8|RIPK7|ROCO2 leucine rich repeat kinase 2 protein-coding chr22-1453 chr22 47012952 47013162 + 9.66 0.000 intron (NM_001284305, intron 10 of 12) intron (NM_001284305, intron 10 of 12) -97015 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr10-4295 chr10 13565081 13565291 + 9.66 0.000 Intergenic MSTA|LTR|ERVL-MaLR -21779 NM_003675 8559 Hs.660649 NM_003675 ENSG00000165630 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding chr11-2583 chr11 122580572 122580782 + 9.66 0.000 Intergenic Intergenic -75045 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr9-5019 chr9 26701940 26702150 + 9.66 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 190757 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr2-7964 chr2 63673012 63673222 + 9.66 0.000 Intergenic Intergenic 83966 NM_001199112 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chr5-4778 chr5 55561398 55561608 + 9.66 0.000 Intergenic Intergenic -26425 NM_176895 8611 Hs.696231 NM_003711 ENSG00000067113 PLPP1 LLP1a|LPP1|PAP-2a|PAP2|PPAP2A phospholipid phosphatase 1 protein-coding chr17-6860 chr17 21472965 21473175 + 9.66 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 78608 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr3-10677 chr3 150590601 150590811 + 9.66 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -12615 NM_016275 51714 Hs.369052 NM_016275 ENSG00000198843 SELENOT SELT selenoprotein T protein-coding chr7-8333 chr7 42602122 42602332 + 9.66 0.000 Intergenic L1MEc|LINE|L1 104220 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr14-2025 chr14 60164606 60164816 + 9.66 0.000 intron (NM_001322280, intron 1 of 6) intron (NM_001322280, intron 1 of 6) 687 NM_016029 51635 Hs.59719 NM_016029 ENSG00000100612 DHRS7 CGI-86|SDR34C1|retDSR4|retSDR4 dehydrogenase/reductase 7 protein-coding chr7-4072 chr7 13240398 13240608 + 9.66 0.000 Intergenic Intergenic 552870 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr11-9393 chr11 57089654 57089864 + 9.66 0.000 Intergenic L2a|LINE|L2 52225 NR_036445 219525 Hs.554519 NR_036445 ENSG00000283307 OR5AK4P PJCG3 olfactory receptor family 5 subfamily AK member 4 pseudogene pseudo chr16-5767 chr16 87655237 87655447 + 9.66 0.000 intron (NM_020655, intron 2 of 4) intron (NM_020655, intron 2 of 4) 52834 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr2-6581 chr2 228418141 228418351 + 9.66 0.000 Intergenic Intergenic 193149 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr7-1511 chr7 5494723 5494933 + 9.66 0.000 TTS (NR_030318) TTS (NR_030318) 1089 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr16-5449 chr16 1665262 1665472 + 9.66 0.000 intron (NM_020825, intron 13 of 19) intron (NM_020825, intron 13 of 19) -12912 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 JPT2 C16orf34|HN1L|L11 Jupiter microtubule associated homolog 2 protein-coding chr1-10370 chr1 155176672 155176882 + 9.66 0.000 intron (NM_001256599, intron 3 of 9) intron (NM_001256599, intron 3 of 9) 2023 NM_001256601 80128 Hs.287735 NM_025058 ENSG00000163462 TRIM46 GENEY|TRIFIC tripartite motif containing 46 protein-coding chr9-7329 chr9 13358297 13358507 + 9.66 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 72927 NR_033863 401492 Hs.632651 NR_033863 ENSG00000270547 LINC01235 - long intergenic non-protein coding RNA 1235 ncRNA chr10-6623 chr10 97367185 97367395 + 9.66 0.000 intron (NM_001145114, intron 23 of 31) intron (NM_001145114, intron 23 of 31) -32561 NM_012083 23401 Hs.140720 NM_012083 ENSG00000181274 FRAT2 FRAT-2 FRAT regulator of WNT signaling pathway 2 protein-coding chr2-11622 chr2 4203742 4203952 + 9.66 0.000 Intergenic Intergenic 229686 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr13-2575 chr13 69138197 69138407 + 9.66 0.000 Intergenic ERVL-E-int|LTR|ERVL -84044 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr7-3767 chr7 79876810 79877020 + 9.66 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -257916 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr2-8970 chr2 190088955 190089165 + 9.66 0.000 Intergenic Intergenic -26331 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr3-5763 chr3 22730008 22730218 + 9.66 0.000 Intergenic L1M7|LINE|L1 472465 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr11-6066 chr11 32330012 32330222 + 9.66 0.000 Intergenic Intergenic 70283 NM_001367854 7490 Hs.591980 NM_000378 ENSG00000184937 WT1 AWT1|GUD|NPHS4|WAGR|WIT-2|WT33 WT1 transcription factor protein-coding chr12-5574 chr12 16248250 16248460 + 9.66 0.000 intron (NM_001170798, intron 3 of 8) L2b|LINE|L2 29330 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding chr2-12362 chr2 51554120 51554330 + 9.66 0.000 intron (NR_135237, intron 5 of 10) intron (NR_135237, intron 5 of 10) 521624 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr1-9379 chr1 30526065 30526275 + 9.66 0.000 Intergenic Intergenic -192602 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr1-9871 chr1 66216813 66217023 + 9.66 0.000 intron (NM_001037340, intron 1 of 14) intron (NM_001037340, intron 1 of 14) -115190 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr15-1335 chr15 33457886 33458096 + 9.66 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 147024 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr11-10688 chr11 128988463 128988673 + 9.66 0.000 intron (NM_001142685, intron 11 of 21) intron (NM_001142685, intron 11 of 21) 35620 NM_014715 9743 Hs.440379 NM_014715 ENSG00000134909 ARHGAP32 GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP Rho GTPase activating protein 32 protein-coding chr17-3688 chr17 15190448 15190658 + 9.66 0.000 Intergenic Intergenic 61143 NR_039884 100616125 NR_039884 ENSG00000265110 MIR4731 - microRNA 4731 ncRNA chr13-2502 chr13 53103042 53103252 + 9.66 0.000 Intergenic L2b|LINE|L2 48753 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr1-15133 chr1 103026173 103026383 + 9.66 0.000 non-coding (NR_134980, exon 6 of 68) non-coding (NR_134980, exon 6 of 68) 82218 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr10-4783 chr10 5846303 5846513 + 9.66 0.000 Intergenic Intergenic -32859 NM_001115156 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr3-3862 chr3 37643310 37643520 + 9.66 0.000 intron (NM_002207, intron 16 of 27) intron (NM_002207, intron 16 of 27) 191274 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chrX-3935 chrX 9887253 9887463 + 9.66 0.000 intron (NM_001649, intron 2 of 9) intron (NM_001649, intron 2 of 9) -25014 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr10-8774 chr10 104861708 104861918 + 9.66 0.000 intron (NM_014978, intron 2 of 26) MLT1C|LTR|ERVL-MaLR -195597 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr3-6420 chr3 100927903 100928113 + 9.66 0.000 intron (NM_001349332, intron 1 of 35) MER46C|DNA|TcMar-Tigger 65482 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr5-6332 chr5 134039547 134039757 + 9.66 0.000 Intergenic MER5B|DNA|hAT-Charlie -34677 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr16-1238 chr16 1260314 1260524 + 9.66 0.000 Intergenic CpG 4350 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr13-1879 chr13 31066358 31066568 + 9.66 0.000 Intergenic L1MB7|LINE|L1 95441 NM_006644 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr10-2356 chr10 88651289 88651499 + 9.66 0.000 Intergenic Tigger12|DNA|TcMar-Tigger -13048 NM_001198829 8513 Hs.523130 NM_004190 ENSG00000182333 LIPF GL|HGL|HLAL lipase F, gastric type protein-coding chr11-7189 chr11 130931293 130931503 + 9.66 0.000 Intergenic ERVL-B4-int|LTR|ERVL -14911 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr14-3347 chr14 90148849 90149059 + 9.66 0.000 intron (NM_022054, intron 1 of 1) intron (NM_022054, intron 1 of 1) 86960 NM_022054 56659 Hs.510191 NM_022054 ENSG00000152315 KCNK13 K2p13.1|THIK-1|THIK1 potassium two pore domain channel subfamily K member 13 protein-coding chr21-1077 chr21 32211546 32211756 + 9.66 0.000 Intergenic Intergenic 67398 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chrX-2189 chrX 40104717 40104927 + 9.66 0.000 intron (NM_001123384, intron 1 of 13) CpG-29594 -6864 NM_017745 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr6-2949 chr6 35354750 35354960 + 9.66 0.000 intron (NM_001171819, intron 2 of 6) intron (NM_001171819, intron 2 of 6) 12297 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr6-4183 chr6 2385951 2386161 + 9.66 0.000 intron (NR_046229, intron 4 of 6) intron (NR_046229, intron 4 of 6) 140303 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr14-4319 chr14 22060837 22061047 + 9.66 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 371811 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr15-2739 chr15 99564050 99564260 + 9.66 0.000 Intergenic Intergenic -1262 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr8-4020 chr8 58688407 58688617 + 9.66 0.000 Intergenic L2c|LINE|L2 -28659 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr19-3479 chr19 35970813 35971023 + 9.66 0.000 Intergenic PABL_B|LTR|ERV1 23803 NR_136525 105372383 Hs.641592 NR_136525 LOC105372383 - uncharacterized LOC105372383 ncRNA chr9-7704 chr9 72642528 72642738 + 9.66 0.000 intron (NM_138691, intron 4 of 23) MER102b|DNA|hAT-Charlie 120832 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr6-4638 chr6 47698281 47698491 + 9.66 0.000 promoter-TSS (NM_153838) promoter-TSS (NM_153838) -194 NM_153838 221393 Hs.150131 NM_153838 ENSG00000153294 ADGRF4 GPR115|PGR18 adhesion G protein-coupled receptor F4 protein-coding chr9-4332 chr9 127642451 127642661 + 9.66 0.000 intron (NM_001032221, intron 1 of 18) L3|LINE|CR1 30279 NM_001032221 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr14-5095 chr14 87371480 87371690 + 9.66 0.000 Intergenic Intergenic 283709 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr4-7819 chr4 99479944 99480154 + 9.66 0.000 Intergenic MLT2A2|LTR|ERVL -30972 NM_032149 84103 Hs.97501 NM_032149 ENSG00000138813 C4orf17 - chromosome 4 open reading frame 17 protein-coding chr7-8663 chr7 71736081 71736291 + 9.66 0.000 Intergenic Intergenic -428416 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr2-9018 chr2 196726523 196726733 + 9.66 0.000 intron (NM_001353340, intron 6 of 10) intron (NM_001353340, intron 6 of 10) 13090 NM_001353340 284992 Hs.132519 NM_173466 ENSG00000144395 CCDC150 - coiled-coil domain containing 150 protein-coding chr4-7113 chr4 35335554 35335764 + 9.66 0.000 Intergenic THE1D|LTR|ERVL-MaLR 908280 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr4-8619 chr4 172719960 172720170 + 9.66 0.000 intron (NR_125894, intron 1 of 2) MER41A|LTR|ERV1 6813 NR_125894 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr6-6422 chr6 89723000 89723210 + 9.66 0.000 exon (NM_014611, exon 40 of 102) exon (NM_014611, exon 40 of 102) -84358 NM_020466 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chr3-6024 chr3 49401289 49401499 + 9.66 0.000 intron (NM_001664, intron 1 of 4) AluJr|SINE|Alu 10582 NM_001313946 387 Hs.247077 NM_001664 ENSG00000067560 RHOA ARH12|ARHA|RHO12|RHOH12 ras homolog family member A protein-coding chr11-5847 chr11 9070069 9070279 + 9.66 0.000 intron (NM_001367977, intron 4 of 22) (AG)n|Simple_repeat|Simple_repeat 20205 NR_049874 100847015 NR_049874 ENSG00000264984 MIR5691 - microRNA 5691 ncRNA chr21-1119 chr21 36478227 36478437 + 9.66 0.000 intron (NM_144492, intron 1 of 2) MIRb|SINE|MIR 1790 NM_144492 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr9-6817 chr9 35960433 35960643 + 9.66 0.000 Intergenic Intergenic -2384 NM_019897 56656 Hs.553540 NM_019897 ENSG00000278889 OR2S2 OR37A|OST715 olfactory receptor family 2 subfamily S member 2 (gene/pseudogene) protein-coding chr16-4621 chr16 70675203 70675413 + 9.66 0.000 intron (NM_138383, intron 10 of 14) AluJb|SINE|Alu 10745 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr17-3872 chr17 48823979 48824189 + 9.66 0.000 Intergenic Intergenic -6855 NM_001130918 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr14-3112 chr14 65552193 65552403 + 9.66 0.000 intron (NM_004480, intron 2 of 9) L2a|LINE|L2 81196 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr2-5185 chr2 34927823 34928033 + 9.66 0.000 Intergenic Intergenic 250371 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr4-6305 chr4 85340463 85340673 + 9.66 0.000 Intergenic Intergenic -134582 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr4-4908 chr4 122322694 122322904 + 9.66 0.000 intron (NM_015312, intron 61 of 83) L1MCa|LINE|L1 -56212 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding chr3-9191 chr3 35828548 35828758 + 9.66 0.000 Intergenic L2a|LINE|L2 84177 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr1-3113 chr1 40673522 40673732 + 9.66 0.000 Intergenic L2b|LINE|L2 -7945 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr3-9874 chr3 81296548 81296758 + 9.66 0.000 Intergenic Intergenic 302785 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr2-5368 chr2 96940360 96940570 + 9.66 0.000 intron (NM_001122646, intron 8 of 16) intron (NM_001122646, intron 8 of 16) 21359 NR_110209 101927053 Hs.677537 NR_110209 LOC101927053 - uncharacterized LOC101927053 ncRNA chr14-4538 chr14 41986679 41986889 + 9.66 0.000 Intergenic Intergenic 379928 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr9-6574 chr9 123508929 123509139 + 9.66 0.000 intron (NM_001352968, intron 12 of 18) intron (NM_001352968, intron 12 of 18) -23412 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr14-1970 chr14 36742013 36742223 + 9.66 0.000 intron (NM_001171170, intron 3 of 10) intron (NM_001171170, intron 3 of 10) 84550 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr11-5236 chr11 23756551 23756761 + 9.66 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -337466 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chrX-4853 chrX 104504017 104504227 + 9.66 0.000 Intergenic AluSx|SINE|Alu -62077 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr2-6761 chr2 42547994 42548204 + 9.66 0.000 intron (NM_001282755, intron 2 of 17) intron (NM_001282755, intron 2 of 17) -19946 NM_001282756 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr7-2686 chr7 20033780 20033990 + 9.66 0.000 intron (NR_110114, intron 2 of 5) intron (NR_110114, intron 2 of 5) 106541 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr19-6668 chr19 34055797 34056007 + 9.66 0.000 Intergenic L1M8|LINE|L1 -116602 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr21-1445 chr21 29090009 29090219 + 9.66 0.000 intron (NM_001286622, intron 2 of 8) (TCAT)n|Simple_repeat|Simple_repeat -2140 NM_001286619 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr21-1780 chr21 37537365 37537575 + 9.66 0.000 Intergenic Intergenic 117171 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr15-4252 chr15 33744316 33744526 + 9.66 0.000 intron (NM_001243996, intron 52 of 102) intron (NM_001243996, intron 52 of 102) -224076 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr3-6836 chr3 148528105 148528315 + 9.66 0.000 Intergenic Intergenic -169661 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr12-1664 chr12 53659741 53659951 + 9.66 0.000 Intergenic Intergenic 15573 NM_001330269 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr2-12810 chr2 90036536 90036746 + 9.66 0.000 Intergenic MER70-int|LTR|ERVL -398734 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chrX-494 chrX 41298452 41298662 + 9.66 0.000 Intergenic LTR16A1|LTR|ERVL 22818 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chrX-5332 chrX 146478016 146478226 + 9.66 0.000 Intergenic THE1C|LTR|ERVL-MaLR -331650 NM_001244892 100133053 NM_001244892 ENSG00000235699 CXorf51B CXorf51A chromosome X open reading frame 51B protein-coding chr3-3275 chr3 100254284 100254494 + 9.66 0.000 Intergenic MIR3|SINE|MIR -6603 NM_018309 55773 Hs.477003 NM_018309 ENSG00000036054 TBC1D23 NS4ATP1|PCH11 TBC1 domain family member 23 protein-coding chr3-6109 chr3 53140871 53141081 + 9.66 0.000 Intergenic Intergenic -10541 NM_052859 91869 Hs.631910 NM_052859 ENSG00000163933 RFT1 CDG1N RFT1 homolog protein-coding chr3-9815 chr3 74001983 74002193 + 9.66 0.000 Intergenic MamGypLTR2b|LTR|Gypsy 192844 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr16-1847 chr16 68704358 68704568 + 9.66 0.000 Intergenic Intergenic -32829 NM_001317185 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr9-6459 chr9 87194319 87194529 + 9.66 0.000 Intergenic (CAC)n|Simple_repeat|Simple_repeat 45780 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr11-4406 chr11 83128929 83129139 + 9.66 0.000 Intergenic L1M3e|LINE|L1 -28097 NM_015885 51585 Hs.128959 NM_015885 ENSG00000165494 PCF11 - PCF11 cleavage and polyadenylation factor subunit protein-coding chr22-1985 chr22 20582123 20582333 + 9.66 0.000 intron (NM_001003891, intron 9 of 17) intron (NM_001003891, intron 9 of 17) 74181 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr10-5750 chr10 102801526 102801736 + 9.66 0.000 intron (NM_001083913, intron 2 of 3) intron (NM_001083913, intron 2 of 3) 25410 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr7-8166 chr7 29665613 29665823 + 9.66 0.000 intron (NR_024278, intron 1 of 1) L1MDa|LINE|L1 15110 NR_039600 100616354 NR_039600 ENSG00000212024 MIR550A3 mir-550a-3 microRNA 550a-3 ncRNA chr6-3337 chr6 13524213 13524423 + 9.66 0.000 Intergenic Intergenic -36681 NM_001242629 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr4-3685 chr4 48967192 48967402 + 9.66 0.000 Intergenic LTR79|LTR|ERVL -18978 NM_025087 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr20-420 chr20 33685786 33685996 + 9.66 0.000 intron (NM_005225, intron 1 of 6) CpG 494 NM_005225 1869 Hs.654393 NM_005225 ENSG00000101412 E2F1 E2F-1|RBAP1|RBBP3|RBP3 E2F transcription factor 1 protein-coding chr12-4754 chr12 52372599 52372809 + 9.66 0.000 Intergenic Intergenic -5223 NM_002283 3891 Hs.182507 NM_002283 ENSG00000135443 KRT85 ECTD4|HB5|Hb-5|K85|KRTHB5|hHb5 keratin 85 protein-coding chr5-5575 chr5 149677631 149677841 + 9.66 0.000 Intergenic Intergenic -52574 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chrX-5230 chrX 136477706 136477916 + 9.66 0.000 Intergenic Intergenic -10136 NM_001727 680 Hs.121484 NM_001727 ENSG00000102239 BRS3 BB3|BB3R|BBR3 bombesin receptor subtype 3 protein-coding chr16-3863 chr16 68636465 68636675 + 9.66 0.000 Intergenic Intergenic -8740 NM_001793 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr7-4938 chr7 135241483 135241693 + 9.66 0.000 intron (NM_182489, intron 2 of 8) L2c|LINE|L2 9609 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr8-7291 chr8 131678761 131678971 + 9.66 0.000 Intergenic L2c|LINE|L2 -225227 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr8-2049 chr8 118056249 118056459 + 9.66 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 55465 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr2-8888 chr2 177839383 177839593 + 9.66 0.000 intron (NM_001077197, intron 7 of 20) L2|LINE|L2 49268 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr11-7084 chr11 121797046 121797256 + 9.66 0.000 Intergenic MER41A|LTR|ERV1 302693 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr11-6541 chr11 69884276 69884486 + 9.66 0.000 Intergenic Intergenic -64965 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chrX-2598 chrX 105832868 105833078 + 9.66 0.000 intron (NM_198465, intron 2 of 28) AluJr|SINE|Alu 10434 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr11-3116 chr11 34411037 34411247 + 9.66 0.000 Intergenic MER21B|LTR|ERVL -27792 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding chr11-3617 chr11 70185811 70186021 + 9.66 0.000 intron (NM_018043, intron 25 of 25) intron (NM_018043, intron 25 of 25) -17247 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr1-13118 chr1 195002826 195003036 + 9.66 0.000 Intergenic MLT2F|LTR|ERVL 1085784 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr4-3620 chr4 8666728 8666938 + 9.66 0.000 Intergenic Intergenic 74068 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr4-3390 chr4 30825079 30825289 + 9.66 0.000 intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 104815 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr2-8008 chr2 68768121 68768331 + 9.66 0.000 intron (NM_001364821, intron 1 of 10) MIRb|SINE|MIR -6684 NM_014882 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding chr8-4281 chr8 95602731 95602941 + 9.66 0.000 intron (NR_038207, intron 2 of 2) L1PA16|LINE|L1 -333635 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr8-982 chr8 118621981 118622191 + 9.66 0.000 promoter-TSS (NM_001363274) promoter-TSS (NM_001363274) -123 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr20-4141 chr20 43777940 43778150 + 9.66 0.000 Intergenic L1MC2|LINE|L1 -51043 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr17-5910 chr17 74430960 74431170 + 9.66 0.000 Intergenic CpG -1023 NM_022036 55890 Hs.446438 NM_018653 ENSG00000170412 GPRC5C RAIG-3|RAIG3 G protein-coupled receptor class C group 5 member C protein-coding chr12-2098 chr12 50758714 50758924 + 9.66 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -5282 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr3-3529 chr3 37176602 37176812 + 9.66 0.000 promoter-TSS (NM_001348304) promoter-TSS (NM_001348304) -347 NM_001348300 9209 Hs.740522 NM_006309 ENSG00000093167 LRRFIP2 HUFI-2 LRR binding FLII interacting protein 2 protein-coding chr6-5365 chr6 150330670 150330880 + 9.66 0.000 Intergenic ERVL-B4-int|LTR|ERVL -38237 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr3-3385 chr3 52507355 52507565 + 9.66 0.000 intron (NM_015136, intron 18 of 68) L2b|LINE|L2 12122 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr21-578 chr21 46594956 46595166 + 9.66 0.000 Intergenic Intergenic 10021 NM_006272 6285 Hs.422181 NM_006272 ENSG00000160307 S100B NEF|S100|S100-B|S100beta S100 calcium binding protein B protein-coding chr10-2237 chr10 86992514 86992724 + 9.66 0.000 intron (NM_133447, intron 4 of 11) intron (NM_133447, intron 4 of 11) 22283 NM_133447 119385 Hs.511787 NM_133447 AGAP11 - ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 protein-coding chr17-2518 chr17 8249206 8249416 + 9.66 0.000 promoter-TSS (NM_012393) promoter-TSS (NM_012393) 22 NM_012393 5198 Hs.573976 NM_012393 ENSG00000178921 PFAS FGAMS|FGAR-AT|FGARAT|GATD8|PURL phosphoribosylformylglycinamidine synthase protein-coding chr2-4338 chr2 239518971 239519181 + 9.66 0.000 Intergenic Intergenic 117328 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr22-2959 chr22 49988580 49988790 + 9.66 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 24080 NM_001001694 400935 Hs.526712 NM_001001694 ENSG00000188263 IL17REL - interleukin 17 receptor E like protein-coding chr22-1179 chr22 39297108 39297318 + 9.66 0.000 Intergenic Intergenic 16698 NR_000028 116938 NR_000028 ENSG00000209480 SNORD83B RNU83B|U83B small nucleolar RNA, C/D box 83B snoRNA chr2-3048 chr2 85656020 85656230 + 9.66 0.000 Intergenic Intergenic 12074 NM_001367281 6439 Hs.512690 NM_000542 ENSG00000168878 SFTPB PSP-B|SFTB3|SFTP3|SMDP1|SP-B surfactant protein B protein-coding chr9-6977 chr9 108693395 108693605 + 9.66 0.000 Intergenic Intergenic 162486 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr22-2011 chr22 31646771 31646981 + 9.66 0.000 intron (NM_001326416, intron 3 of 10) intron (NM_001326416, intron 3 of 10) -8353 NM_178022 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr18-1293 chr18 62897254 62897464 + 9.66 0.000 intron (NM_194449, intron 6 of 16) intron (NM_194449, intron 6 of 16) 181818 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr8-5468 chr8 43042721 43042931 + 9.66 0.000 Intergenic Intergenic -13473 NR_033698 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr5-7654 chr5 52853488 52853698 + 9.66 0.000 intron (NM_181501, intron 2 of 28) intron (NM_181501, intron 2 of 28) 65677 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr9-5758 chr9 127404762 127404972 + 9.66 0.000 exon (NM_001271712, exon 6 of 8) exon (NM_001271712, exon 6 of 8) 7698 NM_014580 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr1-10202 chr1 113153523 113153733 + 9.66 0.000 Intergenic Intergenic 52625 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr2-8441 chr2 120471338 120471548 + 9.66 0.000 Intergenic Intergenic -5094 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr18-1878 chr18 27136432 27136642 + 9.66 0.000 intron (NM_001256316, intron 2 of 4) intron (NM_001256316, intron 2 of 4) 48771 NM_001256316 83539 Hs.44584 NM_031422 ENSG00000154080 CHST9 GALNAC4ST-2|GalNAc4ST2 carbohydrate sulfotransferase 9 protein-coding chr15-4717 chr15 67280327 67280537 + 9.66 0.000 intron (NM_001322475, intron 3 of 17) MLT1A0|LTR|ERVL-MaLR -25234 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding chr14-2652 chr14 69485734 69485944 + 9.66 0.000 intron (NM_001161498, intron 1 of 12) intron (NM_001161498, intron 1 of 12) 1111 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr17-1697 chr17 28902564 28902774 + 9.66 0.000 exon (NM_144683, exon 2 of 5) exon (NM_144683, exon 2 of 5) 410 NM_144683 147015 Hs.631760 NM_144683 ENSG00000167536 DHRS13 SDR7C5 dehydrogenase/reductase 13 protein-coding chr9-2780 chr9 111743400 111743610 + 9.66 0.000 intron (NM_173521, intron 8 of 25) MER44B|DNA|TcMar-Tigger 16031 NM_001080551 158401 Hs.428209 NM_173521 ENSG00000165181 SHOC1 C9orf84|ZIP2|ZIP2H shortage in chiasmata 1 protein-coding chr16-2901 chr16 959427 959637 + 9.66 0.000 intron (NM_001352017, intron 1 of 11) L1MC3|LINE|L1 11452 NM_001352021 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr3-3750 chr3 5014413 5014623 + 9.66 0.000 Intergenic Intergenic -34557 NR_125916 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr2-4481 chr2 241000230 241000440 + 9.66 0.000 intron (NM_001080437, intron 1 of 31) intron (NM_001080437, intron 1 of 31) 1717 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr12-4115 chr12 63182231 63182441 + 9.66 0.000 Intergenic Intergenic -29526 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr19-5277 chr19 55535382 55535592 + 9.66 0.000 intron (NM_001370096, intron 2 of 3) MIRb|SINE|MIR 1646 NM_001370096 646643 Hs.532676 NM_001101401 ENSG00000187550 SBK2 SGK069 SH3 domain binding kinase family member 2 protein-coding chr6-4458 chr6 35310958 35311168 + 9.66 0.000 intron (NM_022047, intron 3 of 10) intron (NM_022047, intron 3 of 10) 13245 NM_022047 50619 Hs.15476 NM_022047 ENSG00000023892 DEF6 IBP|SLAT|SWAP70L DEF6 guanine nucleotide exchange factor protein-coding chr8-5734 chr8 136460202 136460412 + 9.66 0.000 Intergenic AluSz|SINE|Alu -70491 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr14-2193 chr14 100458618 100458828 + 9.66 0.000 intron (NM_001350949, intron 2 of 6) L1MEc|LINE|L1 82238 NM_024515 79446 Hs.497599 NM_024515 ENSG00000176473 WDR25 C14orf67 WD repeat domain 25 protein-coding chr9-4233 chr9 79015816 79016026 + 9.66 0.000 Intergenic Intergenic 129745 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chrX-4901 chrX 107770058 107770268 + 9.66 0.000 intron (NM_198057, intron 1 of 2) intron (NM_198057, intron 1 of 2) 5624 NM_198057 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr7-5360 chr7 30768718 30768928 + 9.66 0.000 intron (NR_037598, intron 3 of 19) L2a|LINE|L2 -2594 NM_032222 84182 Hs.660192 NM_032222 ENSG00000106125 MINDY4 AQP-1|AQP1|C7orf67|CHIP28|FAM188B MINDY lysine 48 deubiquitinase 4 protein-coding chr1-11120 chr1 231576938 231577148 + 9.66 0.000 intron (NR_028398, intron 3 of 10) L2a|LINE|L2 35047 NR_034037 100287814 Hs.25555 NR_034037 ENSG00000229228 LINC00582 - long intergenic non-protein coding RNA 582 ncRNA chr5-8271 chr5 112669736 112669946 + 9.66 0.000 intron (NR_104673, intron 1 of 2) L3b|LINE|CR1 13047 NR_104673 102467216 Hs.174158 NR_104673 LOC102467216 - uncharacterized LOC102467216 ncRNA chr7-3417 chr7 139941326 139941536 + 9.66 0.000 intron (NM_001366537, intron 4 of 11) intron (NM_001366537, intron 4 of 11) 112167 NM_001166253 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr3-7434 chr3 123001038 123001248 + 9.66 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) -7870 NM_001256346 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr10-4470 chr10 78453005 78453215 + 9.66 0.000 Intergenic Intergenic 185768 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr20-1682 chr20 34768161 34768371 + 9.66 0.000 intron (NM_001242539, intron 3 of 11) intron (NM_001242539, intron 3 of 11) 14138 NM_001242539 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding chrX-1295 chrX 118521397 118521607 + 9.66 0.000 intron (NM_144658, intron 1 of 52) intron (NM_144658, intron 1 of 52) 25593 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr2-14538 chr2 229948493 229948703 + 9.66 0.000 intron (NM_174899, intron 1 of 3) MLT1J|LTR|ERVL-MaLR -25418 NM_001348335 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr6-5084 chr6 118200152 118200362 + 9.66 0.000 intron (NM_001029858, intron 2 of 7) MER31B|LTR|ERV1 114354 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr11-4627 chr11 13786968 13787178 + 9.66 0.000 intron (NR_149108, intron 3 of 3) MIRb|SINE|MIR 2687 NR_149108 105376562 Hs.577257 NR_149108 ENSG00000255411 LINC02548 - long intergenic non-protein coding RNA 2548 ncRNA chr5-8029 chr5 90050752 90050962 + 9.66 0.000 Intergenic Intergenic -34137 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr12-5931 chr12 72346479 72346689 + 9.66 0.000 intron (NM_013381, intron 2 of 18) intron (NM_013381, intron 2 of 18) -73075 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr1-7868 chr1 102020375 102020585 + 9.66 0.000 Intergenic Intergenic -23246 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr6-6774 chr6 3708411 3708621 + 9.66 0.000 Intergenic Intergenic 43496 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr8-3283 chr8 21343478 21343688 + 9.66 0.000 Intergenic Intergenic 45344 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA chr6-5205 chr6 132545676 132545886 + 9.66 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -6903 NM_053278 83551 Hs.350571 NM_053278 ENSG00000146385 TAAR8 GPR102|TA5|TAR5|TRAR5|TaR-5|TaR-8 trace amine associated receptor 8 protein-coding chrX-2144 chrX 34664017 34664227 + 9.66 0.000 Intergenic Intergenic -6837 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chrX-4696 chrX 86310620 86310830 + 9.66 0.000 intron (NM_001139515, intron 1 of 11) HERVL-int|LTR|ERVL 47757 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr14-3017 chr14 54718057 54718267 + 9.66 0.000 intron (NM_001161576, intron 2 of 10) intron (NM_001161576, intron 2 of 10) -36671 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr18-3481 chr18 71422660 71422870 + 9.66 0.000 Intergenic L1P3|LINE|L1 156191 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr2-7634 chr2 27298092 27298302 + 9.66 0.000 intron (NM_187841, intron 1 of 8) intron (NM_187841, intron 1 of 8) 10248 NM_003353 7349 Hs.534363 NM_003353 ENSG00000163794 UCN UI|UROC urocortin protein-coding chr5-2032 chr5 72108678 72108888 + 9.66 0.000 intron (NM_005909, intron 1 of 6) CpG 1308 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr17-5613 chr17 48675582 48675792 + 9.66 0.000 Intergenic THE1D|LTR|ERVL-MaLR -43128 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr10-7466 chr10 8795795 8796005 + 9.66 0.000 Intergenic MER20B|DNA|hAT-Charlie -102089 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LINC02676 - long intergenic non-protein coding RNA 2676 ncRNA chr4-8585 chr4 168862425 168862635 + 9.66 0.000 intron (NM_001367567, intron 1 of 11) intron (NM_001367567, intron 1 of 11) 30435 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr8-3136 chr8 68862248 68862458 + 9.66 0.000 Intergenic Intergenic 241837 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr4-1156 chr4 99088758 99088968 + 9.66 0.000 promoter-TSS (NR_037884) promoter-TSS (NR_037884) 6 NR_037884 100507053 Hs.635084 NR_037884 ENSG00000246090 LOC100507053 - uncharacterized LOC100507053 ncRNA chr2-7725 chr2 36095703 36095913 + 9.66 0.000 Intergenic L1PA8|LINE|L1 259762 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr7-1666 chr7 102433925 102434135 + 9.66 0.000 intron (NM_032831, intron 1 of 2) intron (NM_032831, intron 1 of 2) 455 NM_001126340 80228 Hs.363308 NM_032831 ENSG00000160991 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding chr13-4102 chr13 79094691 79094901 + 9.66 0.000 Intergenic L2b|LINE|L2 -254746 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr9-7722 chr9 73461243 73461453 + 9.66 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 309483 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr7-7896 chr7 6461398 6461608 + 9.66 0.000 3' UTR (NM_006854, exon 5 of 5) 3' UTR (NM_006854, exon 5 of 5) -13491 NM_001142936 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr10-4156 chr10 86340432 86340642 + 9.66 0.000 intron (NM_017551, intron 2 of 15) HAL1|LINE|L1 26258 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr8-6879 chr8 100865016 100865226 + 9.66 0.000 Intergenic L2c|LINE|L2 85450 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr2-7055 chr2 162554531 162554741 + 9.66 0.000 intron (NM_033272, intron 2 of 15) MLT1D|LTR|ERVL-MaLR 210268 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr17-5463 chr17 40118252 40118462 + 9.66 0.000 Intergenic L2a|LINE|L2 -3614 NM_001365921 339287 Hs.532786 NM_001012241 ENSG00000188895 MSL1 MSL-1 MSL complex subunit 1 protein-coding chr15-3736 chr15 57920958 57921168 + 9.66 0.000 Intergenic Intergenic 92960 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr6-5049 chr6 112909925 112910135 + 9.66 0.000 Intergenic Intergenic 523417 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr6-5400 chr6 154995975 154996185 + 9.66 0.000 Intergenic Intergenic -94209 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr8-6224 chr8 37998701 37998911 + 9.66 0.000 Intergenic AluSx4|SINE|Alu -31728 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr1-10972 chr1 214440691 214440901 + 9.66 0.000 intron (NM_005401, intron 3 of 18) intron (NM_005401, intron 3 of 18) 110806 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr22-3431 chr22 39512337 39512547 + 9.66 0.000 exon (NM_019008, exon 5 of 6) exon (NM_019008, exon 5 of 6) -8117 NM_001675 468 Hs.496487 NM_001675 ENSG00000128272 ATF4 CREB-2|CREB2|TAXREB67|TXREB activating transcription factor 4 protein-coding chr3-4491 chr3 56134534 56134744 + 9.66 0.000 intron (NR_132749, intron 6 of 17) intron (NR_132749, intron 6 of 17) -282045 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr8-4332 chr8 99980585 99980795 + 9.66 0.000 intron (NM_015668, intron 22 of 27) intron (NM_015668, intron 22 of 27) -23892 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr11-7046 chr11 119796749 119796959 + 9.66 0.000 Intergenic Intergenic 67271 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr14-4422 chr14 31879942 31880152 + 9.66 0.000 Intergenic Intergenic -64806 NR_146544 105370439 NR_146544 ENSG00000258474 LINC02313 - long intergenic non-protein coding RNA 2313 ncRNA chr3-7788 chr3 80191237 80191447 + 9.66 0.000 Intergenic Intergenic -423344 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr11-1843 chr11 76669965 76670175 + 9.66 0.000 promoter-TSS (NM_005512) promoter-TSS (NM_005512) -70 NM_005512 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr9-6960 chr9 104467576 104467786 + 9.66 0.000 Intergenic Intergenic -36582 NM_001004485 138805 Hs.553602 NM_001004485 ENSG00000186881 OR13F1 OR9-6 olfactory receptor family 13 subfamily F member 1 protein-coding chr16-3535 chr16 31335458 31335668 + 9.66 0.000 Intergenic Intergenic -19613 NM_001286375 3687 Hs.248472 NM_000887 ENSG00000140678 ITGAX CD11C|SLEB6 integrin subunit alpha X protein-coding chr16-3744 chr16 12973642 12973852 + 9.66 0.000 intron (NM_001145204, intron 2 of 4) intron (NM_001145204, intron 2 of 4) 72149 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr5-8215 chr5 108101914 108102124 + 9.66 0.000 intron (NM_001163315, intron 6 of 8) intron (NM_001163315, intron 6 of 8) 280079 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr12-8013 chr12 112696357 112696567 + 9.66 0.000 intron (NM_001347952, intron 1 of 21) L1PB2|LINE|L1 -1286 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr20-568 chr20 24785475 24785685 + 9.66 0.000 Intergenic Intergenic -163689 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr8-4244 chr8 90275317 90275527 + 9.66 0.000 intron (NR_051989, intron 2 of 3) THE1B-int|LTR|ERVL-MaLR 53934 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chrX-1563 chrX 51004422 51004632 + 9.66 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 93792 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr3-2477 chr3 128597968 128598178 + 9.66 0.000 Intergenic Charlie8|DNA|hAT-Charlie -21987 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr5-4904 chr5 68648258 68648468 + 9.66 0.000 Intergenic L2c|LINE|L2 355786 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr22-1392 chr22 37979704 37979914 + 9.66 0.000 intron (NM_006941, intron 2 of 3) intron (NM_006941, intron 2 of 3) 4723 NM_006941 6663 Hs.376984 NM_006941 ENSG00000100146 SOX10 DOM|PCWH|WS2E|WS4|WS4C SRY-box transcription factor 10 protein-coding chr4-2424 chr4 119683610 119683820 + 9.66 0.000 Intergenic Intergenic -54911 NM_001083 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr1-6786 chr1 84801562 84801772 + 9.66 0.000 Intergenic Intergenic 91539 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding chr2-14388 chr2 219622016 219622226 + 9.66 0.000 Intergenic MamGypLTR1d|LTR|Gypsy -5449 NM_201574 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr6-5398 chr6 154740070 154740280 + 9.66 0.000 intron (NM_014892, intron 1 of 19) intron (NM_014892, intron 1 of 19) 6797 NM_001286188 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr6-5350 chr6 148346691 148346901 + 9.66 0.000 intron (NM_001346506, intron 1 of 20) intron (NM_001346506, intron 1 of 20) 3958 NM_001346506 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr9-1979 chr9 113293507 113293717 + 9.66 0.000 TTS (NM_004697) TTS (NM_004697) 5253 NM_001371234 chr8-3553 chr8 125918637 125918847 + 9.66 0.000 Intergenic AluY|SINE|Alu 32455 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr18-1332 chr18 76477766 76477976 + 9.66 0.000 intron (NM_014643, intron 1 of 6) intron (NM_014643, intron 1 of 6) -13781 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr3-8727 chr3 194161938 194162148 + 9.66 0.000 Intergenic L2b|LINE|L2 25895 NM_005524 3280 Hs.250666 NM_005524 ENSG00000114315 HES1 HES-1|HHL|HRY|bHLHb39 hes family bHLH transcription factor 1 protein-coding chr12-7265 chr12 52192189 52192399 + 9.66 0.000 promoter-TSS (NM_001081492) promoter-TSS (NM_001081492) -280 NM_001081492 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr2-8094 chr2 75589488 75589698 + 9.66 0.000 Intergenic Intergenic -19874 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr21-1459 chr21 32943036 32943246 + 9.66 0.000 Intergenic Intergenic -15747 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA chrX-2065 chrX 19603316 19603526 + 9.66 0.000 intron (NM_001024666, intron 8 of 16) intron (NM_001024666, intron 8 of 16) 67578 NM_001353897 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr6-4322 chr6 16332146 16332356 + 9.66 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 93664 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr9-4262 chr9 96161759 96161969 + 9.66 0.000 Intergenic L3|LINE|CR1 -45453 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr16-2144 chr16 30991551 30991761 + 9.66 0.000 3' UTR (NM_052874, exon 10 of 10) 3' UTR (NM_052874, exon 10 of 10) 6449 NM_001142778 80270 Hs.460618 NM_025193 ENSG00000099377 HSD3B7 CBAS1|PFIC4|SDR11E3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding chr2-7746 chr2 37780349 37780559 + 9.66 0.000 Intergenic Intergenic 49257 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chrX-1130 chrX 29016065 29016275 + 9.66 0.000 intron (NM_014271, intron 2 of 10) L2c|LINE|L2 428724 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr3-2456 chr3 69848217 69848427 + 9.66 0.000 intron (NM_001354608, intron 2 of 10) intron (NM_001354608, intron 2 of 10) -17902 NM_198177 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr1-3278 chr1 225987859 225988069 + 9.66 0.000 exon (NM_152608, exon 6 of 7) exon (NM_152608, exon 6 of 7) 11379 NM_152608 163859 Hs.520192 NM_152608 ENSG00000143751 SDE2 C1orf55|dJ671D7.1 SDE2 telomere maintenance homolog protein-coding chr2-9149 chr2 211451412 211451622 + 9.66 0.000 intron (NM_001042599, intron 20 of 26) intron (NM_001042599, intron 20 of 26) 833946 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr11-6325 chr11 62266696 62266906 + 9.66 0.000 Intergenic MIR|SINE|MIR -3357 NM_002411 4250 Hs.46452 NM_002411 ENSG00000110484 SCGB2A2 MGB1|UGB2 secretoglobin family 2A member 2 protein-coding chr10-4745 chr10 1855816 1856026 + 9.66 0.000 Intergenic Intergenic -118396 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr9-1801 chr9 37594551 37594761 + 9.66 0.000 Intergenic MIR3|SINE|MIR -2017 NM_001134485 401505 Hs.130774 NM_001001790 ENSG00000175768 TOMM5 C9orf105|Tom5|bA613M10.3 translocase of outer mitochondrial membrane 5 protein-coding chr9-2596 chr9 3880962 3881172 + 9.66 0.000 intron (NM_001042413, intron 7 of 10) intron (NM_001042413, intron 7 of 10) -17579 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr3-9699 chr3 65563632 65563842 + 9.66 0.000 intron (NM_001365904, intron 2 of 24) MIRb|SINE|MIR -330079 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr10-5084 chr10 44960939 44961149 + 9.66 0.000 intron (NM_032023, intron 1 of 10) intron (NM_032023, intron 1 of 10) 1242 NM_032023 83937 Hs.522895 NM_032023 ENSG00000107551 RASSF4 AD037 Ras association domain family member 4 protein-coding chr16-1879 chr16 84484804 84485014 + 9.66 0.000 intron (NM_020947, intron 5 of 7) intron (NM_020947, intron 5 of 7) -17548 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chrX-3733 chrX 120217666 120217876 + 9.66 0.000 Intergenic L1MA4|LINE|L1 27496 NR_027131 158801 Hs.442518 NM_173522 ENSG00000233382 NKAPP1 CXorf42 NFKB activating protein pseudogene 1 pseudo chr14-2078 chr14 69816042 69816252 + 9.66 0.000 TTS (NR_149012) TTS (NR_149012) 4387 NR_149012 100506358 NR_149012 LOC100506358 - uncharacterized LOC100506358 ncRNA chr5-1128 chr5 73693841 73694051 + 9.66 0.000 intron (NM_001177693, intron 2 of 35) intron (NM_001177693, intron 2 of 35) 67788 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr19-5845 chr19 42191069 42191279 + 9.66 0.000 Intergenic LTR33|LTR|ERVL 26503 NR_073050 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr17-3884 chr17 49959166 49959376 + 9.66 0.000 Intergenic Intergenic -9919 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr11-4988 chr11 72196590 72196800 + 9.66 0.000 TTS (NM_016725) TTS (NM_016725) 4555 NM_016729 2348 Hs.73769 NM_000802 ENSG00000110195 FOLR1 FBP|FOLR|FRalpha folate receptor alpha protein-coding chr5-5085 chr5 96834199 96834409 + 9.66 0.000 Intergenic MIRb|SINE|MIR -20159 NM_001198541 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr12-6440 chr12 88946347 88946557 + 9.66 0.000 Intergenic Intergenic 73240 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr19-5502 chr19 45314981 45315191 + 9.66 0.000 intron (NM_001824, intron 4 of 7) L2c|LINE|L2 7789 NM_001824 1158 Hs.334347 NM_001824 ENSG00000104879 CKM CKMM|CPK-M|M-CK creatine kinase, M-type protein-coding chr17-1837 chr17 12765597 12765807 + 9.66 0.000 3' UTR (NM_153604, exon 13 of 13) 3' UTR (NM_153604, exon 13 of 13) -23796 NM_001321164 9912 Hs.499758 NM_014859 ENSG00000006740 ARHGAP44 NPC-A-10|RICH2 Rho GTPase activating protein 44 protein-coding chr18-2255 chr18 71596080 71596290 + 9.66 0.000 Intergenic L1MA6|LINE|L1 -17229 NR_038326 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr17-6893 chr17 32355953 32356163 + 9.66 0.000 intron (NM_001032293, intron 2 of 10) MIRc|SINE|MIR 5920 NM_001098507 7756 Hs.500775 NM_003457 ENSG00000010244 ZNF207 BuGZ|hBuGZ zinc finger protein 207 protein-coding chr10-4530 chr10 95125641 95125851 + 9.66 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -56249 NM_001198853 1558 Hs.709188 NM_000770 ENSG00000138115 CYP2C8 CPC8|CYP2C8DM|CYPIIC8|MP-12/MP-20 cytochrome P450 family 2 subfamily C member 8 protein-coding chr2-6517 chr2 198232955 198233165 + 9.66 0.000 Intergenic Intergenic 142037 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr5-3730 chr5 31692966 31693176 + 9.66 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 53940 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr2-14572 chr2 231488658 231488868 + 9.66 0.000 Intergenic Intergenic -24279 NM_005381 4691 Hs.79110 NM_005381 ENSG00000115053 NCL C23|Nsr1 nucleolin protein-coding chr1-12944 chr1 151189151 151189361 + 9.66 0.000 intron (NM_005997, intron 1 of 5) L2c|LINE|L2 941 NM_001271088 6944 Hs.2430 NM_005997 ENSG00000163159 VPS72 CFL1|Swc2|TCFL1|YL-1|YL1 vacuolar protein sorting 72 homolog protein-coding chr1-3869 chr1 44787695 44787905 + 9.66 0.000 5' UTR (NM_153274, exon 1 of 9) 5' UTR (NM_153274, exon 1 of 9) 370 NM_153274 266675 Hs.302513 NM_153274 ENSG00000142959 BEST4 VMD2L2 bestrophin 4 protein-coding chr10-2158 chr10 101682427 101682637 + 9.66 0.000 intron (NM_001323541, intron 1 of 8) intron (NM_001323541, intron 1 of 8) 12638 NM_022039 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr12-4946 chr12 70890814 70891024 + 9.66 0.000 intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) 29819 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr5-5092 chr5 97803122 97803332 + 9.66 0.000 Intergenic MER41-int|LTR|ERV1 -37531 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA chr10-3335 chr10 11782936 11783146 + 9.66 0.000 Intergenic Intergenic -40315 NM_153256 254427 Hs.435775 NM_153256 ENSG00000148426 PROSER2 C10orf47 proline and serine rich 2 protein-coding chr11-2325 chr11 68684608 68684818 + 9.66 0.000 5' UTR (NM_015973, exon 1 of 6) 5' UTR (NM_015973, exon 1 of 6) 169 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr1-10891 chr1 206739376 206739586 + 9.66 0.000 Intergenic Intergenic -31292 NM_153758 29949 Hs.661017 NM_013371 ENSG00000142224 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding chrX-1715 chrX 21915830 21916040 + 9.66 0.000 Intergenic MER112|DNA|hAT-Charlie -24638 NM_001258423 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr19-2964 chr19 13341261 13341471 + 9.66 0.000 intron (NM_023035, intron 6 of 46) MLT1C|LTR|ERVL-MaLR 165094 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr22-3394 chr22 34967788 34967998 + 9.66 0.000 intron (NR_138042, intron 1 of 4) intron (NR_138042, intron 1 of 4) 30023 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr3-6762 chr3 141380319 141380529 + 9.66 0.000 intron (NM_001080412, intron 3 of 7) intron (NM_001080412, intron 3 of 7) -6001 NM_001350099 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr5-4824 chr5 60488728 60488938 + 9.66 0.000 promoter-TSS (NM_001349241) promoter-TSS (NM_001349241) -768 NM_001165899 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr3-4204 chr3 131543788 131543998 + 9.66 0.000 intron (NM_130808, intron 14 of 15) intron (NM_130808, intron 14 of 15) -40922 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr3-4725 chr3 63262477 63262687 + 9.66 0.000 Intergenic LTR16D|LTR|ERVL -15726 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr4-1818 chr4 77203625 77203835 + 9.66 0.000 Intergenic Intergenic 46523 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr6-5251 chr6 136924018 136924228 + 9.66 0.000 exon (NM_001008783, exon 2 of 2) exon (NM_001008783, exon 2 of 2) 1822 NM_001008783 340146 Hs.369703 NM_001008783 ENSG00000182747 SLC35D3 FRCL1 solute carrier family 35 member D3 protein-coding chr10-7909 chr10 50552152 50552362 + 9.66 0.000 intron (NM_147156, intron 2 of 10) intron (NM_147156, intron 2 of 10) 71699 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr5-4541 chr5 17001329 17001539 + 9.66 0.000 Intergenic Intergenic -65146 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr4-2179 chr4 106803166 106803376 + 9.66 0.000 Intergenic L1MC4|LINE|L1 233042 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr8-2774 chr8 118033152 118033362 + 9.66 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 78562 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr22-1074 chr22 24181180 24181390 + 9.66 0.000 promoter-TSS (NM_019601) promoter-TSS (NM_019601) -202 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chrX-4466 chrX 57673302 57673512 + 9.66 0.000 Intergenic MER51-int|LTR|ERV1 6853 NM_001319967 286430 Hs.306842 NM_001319967 ENSG00000215174 NLRP2B CLRX.1|NALP2P|NLRP2P|NOD24|POP4 NLR family pyrin domain containing 2B protein-coding chr6-3158 chr6 114347944 114348154 + 9.66 0.000 Intergenic Intergenic -285172 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr10-2680 chr10 99659959 99660169 + 9.66 0.000 intron (NM_020354, intron 2 of 12) intron (NM_020354, intron 2 of 12) 435 NM_001349963 57089 Hs.28326 NM_020354 ENSG00000198018 ENTPD7 LALP1 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding chr1-9669 chr1 48623857 48624067 + 9.66 0.000 intron (NM_001323575, intron 9 of 12) intron (NM_001323575, intron 9 of 12) -151754 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr14-1157 chr14 49688016 49688226 + 9.66 0.000 promoter-TSS (NM_001197331) promoter-TSS (NM_001197331) 93 NM_001197331 5427 Hs.162777 NM_002692 ENSG00000100479 POLE2 DPE2 DNA polymerase epsilon 2, accessory subunit protein-coding chr5-6155 chr5 42612098 42612308 + 9.66 0.000 intron (NM_001242460, intron 1 of 7) intron (NM_001242460, intron 1 of 7) 46339 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr10-3724 chr10 114334343 114334553 + 9.66 0.000 intron (NM_001001936, intron 2 of 18) MamSINE1|SINE|tRNA-RTE 70054 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr8-4011 chr8 57525705 57525915 + 9.66 0.000 Intergenic Intergenic 182023 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr2-10803 chr2 46459165 46459375 + 9.66 0.000 Intergenic Intergenic -20295 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding chrX-3812 chrX 142731071 142731281 + 9.66 0.000 Intergenic ERVL-B4-int|LTR|ERVL -294752 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr18-1780 chr18 11096918 11097128 + 9.66 0.000 intron (NM_022068, intron 1 of 51) intron (NM_022068, intron 1 of 51) 51739 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr2-3100 chr2 134402455 134402665 + 9.66 0.000 intron (NM_001371457, intron 11 of 16) intron (NM_001371457, intron 11 of 16) 148488 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr3-2949 chr3 58751663 58751873 + 9.66 0.000 intron (NM_001351530, intron 15 of 15) MIR|SINE|MIR -72703 NR_110820 101929238 Hs.683953 NR_110820 ENSG00000242428 C3orf67-AS1 - C3orf67 antisense RNA 1 ncRNA chr12-2187 chr12 6996161 6996371 + 9.66 0.000 intron (NR_135131, intron 7 of 7) L2a|LINE|L2 22210 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr12-6877 chr12 20429579 20429789 + 9.66 0.000 intron (NM_000921, intron 1 of 15) intron (NM_000921, intron 1 of 15) 60439 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr5-5174 chr5 110150207 110150417 + 9.66 0.000 Intergenic L1MA5A|LINE|L1 267130 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chrX-2078 chrX 21479570 21479780 + 9.66 0.000 intron (NM_001168648, intron 5 of 20) LTR41B|LTR|ERVL 105257 NM_001330771 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr9-5436 chr9 97210869 97211079 + 9.66 0.000 intron (NR_136286, intron 2 of 17) L1PA3|LINE|L1 -27452 NR_036526 100499484 Hs.435629 NR_036526 ENSG00000254876 SUGT1P4-STRA6LP - SUGT1P4-STRA6LP readthrough pseudo chr2-2758 chr2 204664984 204665194 + 9.66 0.000 intron (NM_205863, intron 1 of 21) intron (NM_205863, intron 1 of 21) 119614 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr22-4035 chr22 41240414 41240624 + 9.66 0.000 intron (NM_138481, intron 1 of 5) intron (NM_138481, intron 1 of 5) 412 NM_138481 150356 Hs.344488 NM_138481 ENSG00000100399 CHADL SLRR4B chondroadherin like protein-coding chr4-4990 chr4 135631347 135631557 + 9.66 0.000 Intergenic L1PB1|LINE|L1 256641 NR_103762 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr22-1358 chr22 28680960 28681170 + 9.66 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -1200 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding chr5-5019 chr5 84227506 84227716 + 9.66 0.000 intron (NM_001278642, intron 2 of 9) L1PA16|LINE|L1 157256 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr22-831 chr22 37742441 37742651 + 9.66 0.000 intron (NM_001039141, intron 11 of 23) AluSz|SINE|Alu 3398 NR_160696 102724378 NR_160696 LOC102724378 - uncharacterized LOC102724378 ncRNA chr4-5084 chr4 146822481 146822691 + 9.66 0.000 intron (NM_031956, intron 9 of 12) L1PA8A|LINE|L1 123278 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr14-3914 chr14 101054759 101054969 + 9.66 0.000 promoter-TSS (NR_030408) promoter-TSS (NR_030408) 177 NR_029698 406924 NR_029698 ENSG00000207993 MIR134 MIRN134|mir-134 microRNA 134 ncRNA chr5-8178 chr5 104819090 104819300 + 9.66 0.000 Intergenic Intergenic -280279 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr10-3363 chr10 17208611 17208821 + 9.66 0.000 Intergenic Intergenic -6645 NM_001351223 1787 Hs.351665 NM_004412 ENSG00000107614 TRDMT1 DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 tRNA aspartic acid methyltransferase 1 protein-coding chr9-4026 chr9 78235315 78235525 + 9.66 0.000 promoter-TSS (NM_001098802) promoter-TSS (NM_001098802) -655 NM_001330694 84131 Hs.187621 NM_032171 ENSG00000148019 CEP78 C9orf81|CRDHL|IP63 centrosomal protein 78 protein-coding chr14-3219 chr14 74371795 74372005 + 9.66 0.000 Intergenic L2|LINE|L2 23429 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr2-4962 chr2 188786964 188787174 + 9.66 0.000 intron (NR_161166, intron 1 of 1) intron (NR_161166, intron 1 of 1) 3054 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr4-3815 chr4 116360028 116360238 + 9.66 0.000 Intergenic HERVL18-int|LTR|ERVL 60408 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr22-1803 chr22 32708934 32709144 + 9.66 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -91777 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr3-7130 chr3 184606611 184606821 + 9.66 0.000 Intergenic L1ME3G|LINE|L1 44931 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr19-1984 chr19 3774490 3774700 + 9.66 0.000 Intergenic (AGAGAC)n|Simple_repeat|Simple_repeat -2367 NM_001319074 84839 Hs.532691 NM_032753 ENSG00000173976 RAX2 ARMD6|CORD11|QRX|RAXL1 retina and anterior neural fold homeobox 2 protein-coding chr17-6735 chr17 81696900 81697110 + 9.66 0.000 intron (NM_004712, intron 18 of 21) intron (NM_004712, intron 18 of 21) 3248 NR_106844 102465471 NR_106844 ENSG00000277784 MIR6786 hsa-mir-6786 microRNA 6786 ncRNA chr20-1943 chr20 24132423 24132633 + 9.66 0.000 Intergenic LTR23|LTR|ERV1 -67239 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr11-4206 chr11 62394900 62395110 + 9.66 0.000 Intergenic Intergenic -24028 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr6-4351 chr6 18603788 18603998 + 9.66 0.000 intron (NR_149116, intron 4 of 7) intron (NR_149116, intron 4 of 7) 32109 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr18-1741 chr18 6647153 6647363 + 9.66 0.000 Intergenic Intergenic -82458 NM_001366231 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr2-3775 chr2 10171091 10171301 + 9.66 0.000 intron (NR_161344, intron 3 of 3) intron (NR_161344, intron 3 of 3) 21475 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr22-1861 chr22 39351851 39352061 + 9.66 0.000 intron (NM_145731, intron 1 of 3) intron (NM_145731, intron 1 of 3) 1965 NM_004711 9145 Hs.216226 NM_004711 ENSG00000100321 SYNGR1 - synaptogyrin 1 protein-coding chr8-3657 chr8 13334718 13334928 + 9.66 0.000 intron (NM_024767, intron 4 of 4) L2a|LINE|L2 -58039 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr10-5280 chr10 68975666 68975876 + 9.66 0.000 intron (NM_001256910, intron 11 of 14) AluSp|SINE|Alu -13032 NM_015634 26128 Hs.279580 NM_015634 ENSG00000198954 KIF1BP KBP|KIAA1279|TTC20 KIF1 binding protein protein-coding chr16-6138 chr16 20537462 20537672 + 9.66 0.000 intron (NM_182617, intron 14 of 14) intron (NM_182617, intron 14 of 14) 38800 NM_182617 348158 Hs.298252 NM_182617 ENSG00000066813 ACSM2B ACSM2|HXMA|HYST1046 acyl-CoA synthetase medium chain family member 2B protein-coding chr18-1134 chr18 6058742 6058952 + 9.66 0.000 intron (NM_173464, intron 16 of 19) intron (NM_173464, intron 16 of 19) -162893 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr21-676 chr21 9724153 9724363 + 9.66 0.000 Intergenic Intergenic 62069 NR_135513 105379514 Hs.543309 NR_135513 LOC105379514 - uncharacterized LOC105379514 ncRNA chr4-2648 chr4 182307990 182308200 + 9.66 0.000 intron (NM_001080477, intron 1 of 27) intron (NM_001080477, intron 1 of 27) 64693 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr3-6112 chr3 53259997 53260207 + 9.66 0.000 Intergenic Intergenic -3988 NR_047580 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr12-3871 chr12 111128566 111128776 + 9.66 0.000 intron (NM_001370598, intron 1 of 21) ERVL-B4-int|LTR|ERVL 28667 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr8-7128 chr8 120516858 120517068 + 9.66 0.000 intron (NM_022045, intron 18 of 21) intron (NM_022045, intron 18 of 21) 71544 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr7-3055 chr7 134720589 134720799 + 9.66 0.000 Intergenic Intergenic -58940 NM_033157 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr6-4641 chr6 48072244 48072454 + 9.66 0.000 Intergenic L1MC3|LINE|L1 -3660 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr5-7129 chr5 905408 905618 + 9.66 0.000 intron (NM_001166260, intron 6 of 8) L1MEc|LINE|L1 12629 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr6-8525 chr6 159974159 159974369 + 9.66 0.000 intron (NM_000876, intron 1 of 47) L1M5|LINE|L1 5165 NM_000876 3482 Hs.487062 NM_000876 ENSG00000197081 IGF2R CD222|CI-M6PR|CIMPR|M6P-R|M6P/IGF2R|MPR 300|MPR1|MPR300|MPRI insulin like growth factor 2 receptor protein-coding chr3-7183 chr3 188857553 188857763 + 9.66 0.000 intron (NM_001167672, intron 7 of 9) intron (NM_001167672, intron 7 of 9) 89981 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr6-1844 chr6 3813139 3813349 + 9.66 0.000 Intergenic Intergenic -36129 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr2-5543 chr2 160736734 160736944 + 9.66 0.000 Intergenic Intergenic -243032 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr19-2892 chr19 46189442 46189652 + 9.66 0.000 non-coding (NR_135234, exon 3 of 3) non-coding (NR_135234, exon 3 of 3) 13515 NR_135234 645553 Hs.613068 NR_135234 IGFL2-AS1 - IGFL2 antisense RNA 1 ncRNA chr2-7053 chr2 161005204 161005414 + 9.66 0.000 Intergenic Intergenic -131646 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr6-3161 chr6 116662311 116662521 + 9.66 0.000 intron (NM_001361191, intron 1 of 8) intron (NM_001361191, intron 1 of 8) 6350 NM_145062 221302 Hs.29857 NM_145062 ENSG00000153975 ZUP1 C6orf113|DUB|ZUFSP zinc finger containing ubiquitin peptidase 1 protein-coding chr3-2220 chr3 32360526 32360736 + 9.66 0.000 intron (NM_178868, intron 2 of 3) intron (NM_178868, intron 2 of 3) -31222 NM_138410 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr11-7168 chr11 128936888 128937098 + 9.66 0.000 3' UTR (NM_001251964, exon 2 of 2) 3' UTR (NM_001251964, exon 2 of 2) 841 NM_001195194 63970 Hs.160953 NM_022112 ENSG00000120471 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding chr7-4683 chr7 40682779 40682989 + 9.66 0.000 intron (NM_001193312, intron 11 of 12) intron (NM_001193312, intron 11 of 12) 297055 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr4-6776 chr4 6855950 6856160 + 9.66 0.000 intron (NM_001100590, intron 3 of 8) intron (NM_001100590, intron 3 of 8) -53389 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chrX-2150 chrX 35513001 35513211 + 9.66 0.000 Intergenic LTR26C|LTR|ERV1 -285236 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr17-2803 chr17 7791488 7791698 + 9.66 0.000 intron (NM_020877, intron 44 of 85) L1ME3G|LINE|L1 37273 NR_002778 118432 Hs.658086 NR_002778 ENSG00000240480 RPL29P2 RPL29_10_1510 ribosomal protein L29 pseudogene 2 pseudo chr7-4607 chr7 22375349 22375559 + 9.66 0.000 Intergenic MER102c|DNA|hAT-Charlie -18300 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr3-7965 chr3 169888356 169888566 + 9.66 0.000 Intergenic L1MC5|LINE|L1 -18526 NM_024727 79782 Hs.411295 NM_024727 ENSG00000114248 LRRC31 HEL-S-293 leucine rich repeat containing 31 protein-coding chrX-465 chrX 153521189 153521399 + 9.66 0.000 Intergenic Intergenic -14828 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr4-4818 chr4 107600645 107600855 + 9.66 0.000 Intergenic Intergenic 119484 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr7-4337 chr7 44345270 44345480 + 9.66 0.000 Intergenic L1ME3A|LINE|L1 -19744 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr11-3016 chr11 739504 739714 + 9.66 0.000 Intergenic L1MB3|LINE|L1 -7855 NM_006755 6888 Hs.438678 NM_006755 ENSG00000177156 TALDO1 TAL|TAL-H|TALDOR|TALH transaldolase 1 protein-coding chr10-3707 chr10 110822169 110822379 + 9.66 0.000 intron (NM_001134363, intron 11 of 13) intron (NM_001134363, intron 11 of 13) 48630 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr13-4229 chr13 95100618 95100828 + 9.66 0.000 intron (NM_001105515, intron 20 of 20) intron (NM_001105515, intron 20 of 20) -109621 NR_145733 109616987 NR_145733 SNORD13G - small nucleolar RNA, C/D box 13G snoRNA chr3-6332 chr3 80331981 80332191 + 9.66 0.000 Intergenic L1MC3|LINE|L1 -432811 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr14-2493 chr14 101983503 101983713 + 9.66 0.000 exon (NM_001376, exon 7 of 78) exon (NM_001376, exon 7 of 78) 19035 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr7-6089 chr7 117491794 117492004 + 9.66 0.000 intron (NM_000492, intron 1 of 26) intron (NM_000492, intron 1 of 26) 11936 NM_000492 1080 Hs.489786 NM_000492 ENSG00000001626 CFTR ABC35|ABCC7|CF|CFTR/MRP|MRP7|TNR-CFTR|dJ760C5.1 CF transmembrane conductance regulator protein-coding chr11-2697 chr11 116696504 116696714 + 9.66 0.000 Intergenic Intergenic 57187 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr3-6410 chr3 99731019 99731229 + 9.66 0.000 intron (NM_001850, intron 2 of 4) L2a|LINE|L2 -86738 NM_032359 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr19-4153 chr19 35068603 35068813 + 9.66 0.000 intron (NR_024562, intron 3 of 3) intron (NR_024562, intron 3 of 3) 28202 NM_002151 3249 Hs.182385 NM_002151 ENSG00000105707 HPN TMPRSS1 hepsin protein-coding chr11-3791 chr11 64196678 64196888 + 9.66 0.000 intron (NM_001282653, intron 5 of 13) intron (NM_001282653, intron 5 of 13) -9897 NM_178443 83706 Hs.180535 NM_031471 ENSG00000149781 FERMT3 KIND3|MIG-2|MIG2B|UNC112C|URP2|URP2SF fermitin family member 3 protein-coding chr12-3038 chr12 1539817 1540027 + 9.66 0.000 Intergenic Intergenic -7730 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr15-2069 chr15 61659939 61660149 + 9.66 0.000 Intergenic Intergenic -69874 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr11-5857 chr11 9718067 9718277 + 9.66 0.000 intron (NM_015055, intron 3 of 11) intron (NM_015055, intron 3 of 11) -40121 NR_036485 283104 Hs.632156 NR_036485 ENSG00000246273 SBF2-AS1 - SBF2 antisense RNA 1 ncRNA chr12-3389 chr12 103012988 103013198 + 9.66 0.000 Intergenic Intergenic -54652 NM_001354304 5053 Hs.560019 NM_000277 ENSG00000171759 PAH PH|PKU|PKU1 phenylalanine hydroxylase protein-coding chr4-7477 chr4 71651809 71652019 + 9.66 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 132165 NM_000583 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr2-13420 chr2 142101161 142101371 + 9.66 0.000 intron (NM_018557, intron 1 of 90) intron (NM_018557, intron 1 of 90) 30435 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr7-1397 chr7 5295079 5295289 + 9.66 0.000 intron (NM_001040661, intron 6 of 10) intron (NM_001040661, intron 6 of 10) 12241 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr2-5013 chr2 226001224 226001434 + 9.66 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -141465 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr12-2662 chr12 30983145 30983355 + 9.66 0.000 intron (NM_001370301, intron 6 of 6) intron (NM_001370301, intron 6 of 6) 56346 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr4-5039 chr4 141102960 141103170 + 9.66 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 30404 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr20-2799 chr20 56554894 56555104 + 9.66 0.000 Intergenic Intergenic 21753 NM_001013646 388799 Hs.287759 NM_001013646 ENSG00000213714 FAM209B C20orf107|dJ1153D9.4 family with sequence similarity 209 member B protein-coding chr7-5445 chr7 38533358 38533568 + 9.66 0.000 intron (NM_001635, intron 2 of 20) intron (NM_001635, intron 2 of 20) 97910 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr1-14055 chr1 28456091 28456301 + 9.66 0.000 intron (NM_023923, intron 1 of 12) MSTA|LTR|ERVL-MaLR 18046 NM_023923 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr2-3433 chr2 96809459 96809669 + 9.66 0.000 3' UTR (NM_020184, exon 7 of 7) 3' UTR (NM_020184, exon 7 of 7) 4093 NR_149141 100506036 Hs.656228 NR_149141 ENSG00000273265 CNNM3-DT - CNNM3 divergent transcript ncRNA chr22-2169 chr22 43389132 43389342 + 9.66 0.000 Intergenic Intergenic -11094 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr6-8187 chr6 133170644 133170854 + 9.66 0.000 Intergenic LFSINE_Vert|SINE|tRNA -70608 NM_001370459 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr5-2551 chr5 176741168 176741378 + 9.66 0.000 Intergenic Intergenic -1932 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr3-4372 chr3 187983342 187983552 + 9.66 0.000 Intergenic Intergenic -7040 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr12-1211 chr12 125145353 125145563 + 9.66 0.000 Intergenic Intergenic -40928 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr11-4560 chr11 123676105 123676315 + 9.66 0.000 Intergenic L2a|LINE|L2 -21603 NM_018400 55800 Hs.4865 NM_018400 ENSG00000166257 SCN3B ATFB16|BRGDA7|HSA243396|SCNB3 sodium voltage-gated channel beta subunit 3 protein-coding chr7-7351 chr7 52504878 52505088 + 9.66 0.000 Intergenic Intergenic -530650 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr13-1294 chr13 43879124 43879334 + 9.66 0.000 promoter-TSS (NM_001350641) promoter-TSS (NM_001350641) 51 NM_001128303 144811 Hs.210586 NM_153218 ENSG00000179630 LACC1 C13orf31|FAMIN laccase domain containing 1 protein-coding chr2-13081 chr2 111173802 111174012 + 9.66 0.000 Intergenic Intergenic 52993 NM_138623 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr3-6269 chr3 71117505 71117715 + 9.66 0.000 intron (NR_146142, intron 6 of 19) GA-rich|Low_complexity|Low_complexity 12976 NM_001244815 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr10-8919 chr10 115548300 115548510 + 9.66 0.000 intron (NM_207303, intron 25 of 28) intron (NM_207303, intron 25 of 28) 455040 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr4-5324 chr4 181821723 181821933 + 9.66 0.000 intron (NR_147188, intron 1 of 2) intron (NR_147188, intron 1 of 2) 8145 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr1-3721 chr1 220051584 220051794 + 9.66 0.000 Intergenic AluJr|SINE|Alu -5184 NM_004446 2058 Hs.497788 NM_004446 ENSG00000136628 EPRS EARS|GLUPRORS|HLD15|PARS|PIG32|QARS|QPRS glutamyl-prolyl-tRNA synthetase protein-coding chr3-11049 chr3 183227196 183227406 + 9.66 0.000 intron (NM_015078, intron 18 of 29) intron (NM_015078, intron 18 of 29) -25952 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr5-4551 chr5 18713105 18713315 + 9.66 0.000 Intergenic L1MA6|LINE|L1 905936 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr2-5461 chr2 127324743 127324953 + 9.66 0.000 intron (NM_006609, intron 8 of 15) intron (NM_006609, intron 8 of 15) 18381 NM_006609 10746 Hs.145605 NM_006609 ENSG00000169967 MAP3K2 MEKK2|MEKK2B mitogen-activated protein kinase kinase kinase 2 protein-coding chr5-5057 chr5 92232117 92232327 + 9.66 0.000 Intergenic L1PA15|LINE|L1 -848905 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr10-3035 chr10 117980357 117980567 + 9.66 0.000 Intergenic MamRep605|LTR?|LTR? -66359 NR_026940 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA chr5-5521 chr5 143806787 143806997 + 9.66 0.000 Intergenic Intergenic -5269 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr21-955 chr21 43955053 43955263 + 9.66 0.000 intron (NM_001037553, intron 1 of 8) L1ME1|LINE|L1 29760 NM_001037553 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr4-6365 chr4 106165412 106165622 + 9.66 0.000 intron (NM_001290768, intron 24 of 26) intron (NM_001290768, intron 24 of 26) -143039 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chrX-3107 chrX 151859959 151860169 + 9.66 0.000 Intergenic L1M4|LINE|L1 51019 NR_136578 105373368 Hs.256904 NR_136578 MAGEA4-AS1 - MAGEA4 antisense RNA 1 ncRNA chr2-13854 chr2 177525554 177525764 + 9.66 0.000 intron (NM_003659, intron 19 of 19) intron (NM_003659, intron 19 of 19) 27137 NM_152517 150737 Hs.447659 NM_152517 ENSG00000196659 TTC30B IFT70|IFT70B|fleer tetratricopeptide repeat domain 30B protein-coding chr1-11021 chr1 221022577 221022787 + 9.66 0.000 Intergenic Intergenic -142542 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chrX-3920 chrX 9468393 9468603 + 9.66 0.000 intron (NM_005647, intron 1 of 17) intron (NM_005647, intron 1 of 17) 3440 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr13-1056 chr13 20182375 20182585 + 9.66 0.000 Intergenic Intergenic 10458 NM_004004 2706 Hs.524894 NM_004004 ENSG00000165474 GJB2 CX26|DFNA3|DFNA3A|DFNB1|DFNB1A|HID|KID|NSRD1|PPK gap junction protein beta 2 protein-coding chr17-6974 chr17 48791761 48791971 + 9.66 0.000 intron (NM_001130918, intron 8 of 15) intron (NM_001130918, intron 8 of 15) 2458 NM_173623 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chrX-3492 chrX 39120061 39120271 + 9.66 0.000 Intergenic L1MA5|LINE|L1 207196 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr17-5676 chr17 50576698 50576908 + 9.66 0.000 intron (NR_046058, intron 8 of 33) intron (NR_046058, intron 8 of 33) -14695 NR_038439 253962 Hs.558704 NR_038439 ENSG00000250107 CACNA1G-AS1 CAS1 CACNA1G antisense RNA 1 ncRNA chr15-2908 chr15 43332953 43333163 + 9.66 0.000 intron (NM_001324368, intron 2 of 10) intron (NM_001324368, intron 2 of 10) 2386 NM_001159280 161823 Hs.533913 NM_001012969 ENSG00000168803 ADAL - adenosine deaminase like protein-coding chr7-2723 chr7 36367141 36367351 + 9.66 0.000 promoter-TSS (NM_001300956) promoter-TSS (NM_001300956) -6 NM_015314 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding KI270757.1-5 KI270757.1 66200 66410 + 9.66 0.000 NA NA NA NA chr3-3614 chr3 90010408 90010618 + 9.66 0.000 Intergenic L2a|LINE|L2 902892 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr8-4419 chr8 108327898 108328108 + 9.66 0.000 Intergenic MIRb|SINE|MIR -79286 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr1-7613 chr1 1796608 1796818 + 9.66 0.000 intron (NM_001282538, intron 5 of 9) intron (NM_001282538, intron 5 of 9) -16682 NM_001353641 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr15-1977 chr15 40871326 40871536 + 9.66 0.000 TTS (NM_133639) TTS (NM_133639) 2803 NM_133639 171177 Hs.447901 NM_133639 ENSG00000104140 RHOV ARHV|CHP|WRCH2 ras homolog family member V protein-coding chr3-3971 chr3 52873729 52873939 + 9.66 0.000 intron (NM_001198974, intron 1 of 9) LTR86A1|LTR|ERVL 23714 NM_001198974 100526772 NM_001198974 ENSG00000248592 STIMATE-MUSTN1 TMEM110-MUSTN1 STIMATE-MUSTN1 readthrough protein-coding chr11-5177 chr11 7216289 7216499 + 9.66 0.000 Intergenic L2b|LINE|L2 -18372 NR_031683 100313774 NR_031683 ENSG00000221703 MIR302E MIRN302E microRNA 302e ncRNA chr3-4520 chr3 113867512 113867722 + 9.66 0.000 intron (NM_017577, intron 2 of 17) L1M4a2|LINE|L1 28829 NM_017577 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr16-7040 chr16 88359706 88359916 + 9.66 0.000 Intergenic L1ME2z|LINE|L1 -67660 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr6-4745 chr6 69317300 69317510 + 9.66 0.000 intron (NM_001704, intron 20 of 31) intron (NM_001704, intron 20 of 31) 479061 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr10-1460 chr10 82942919 82943129 + 9.66 0.000 intron (NR_163253, intron 6 of 10) intron (NR_163253, intron 6 of 10) -710104 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr10-3197 chr10 94912190 94912400 + 9.66 0.000 Intergenic L1PA4|LINE|L1 -26363 NM_000771 1559 Hs.282624 NM_000771 ENSG00000138109 CYP2C9 CPC9|CYP2C|CYP2C10|CYPIIC9|P450IIC9 cytochrome P450 family 2 subfamily C member 9 protein-coding chr18-3548 chr18 76707606 76707816 + 9.66 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger 17682 NR_122073 400661 Hs.514963 NR_122073 ENSG00000276397 LINC01879 - long intergenic non-protein coding RNA 1879 ncRNA chr9-3289 chr9 71692106 71692316 + 9.66 0.000 intron (NM_013390, intron 21 of 23) intron (NM_013390, intron 21 of 23) 76302 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr1-10829 chr1 203669857 203670067 + 9.66 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 42025 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr1-9625 chr1 46280417 46280627 + 9.66 0.000 exon (NM_006369, exon 6 of 10) exon (NM_006369, exon 6 of 10) 22844 NM_006369 10489 Hs.144941 NM_006369 ENSG00000132128 LRRC41 MUF1|PP7759 leucine rich repeat containing 41 protein-coding chr6-2641 chr6 160520709 160520919 + 9.66 0.000 Intergenic LTR12E|LTR|ERV1 -9690 NR_028092 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr18-2611 chr18 26407903 26408113 + 9.66 0.000 Intergenic Intergenic -14987 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr9-1904 chr9 130756801 130757011 + 9.66 0.000 intron (NM_007313, intron 1 of 10) intron (NM_007313, intron 1 of 10) 43025 NM_007313 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr4-5543 chr4 124054132 124054342 + 9.66 0.000 Intergenic Intergenic 279973 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr13-2800 chr13 101742148 101742358 + 9.66 0.000 intron (NM_175929, intron 3 of 4) L1PA8|LINE|L1 174392 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr19-4597 chr19 12764827 12765037 + 9.66 0.000 intron (NM_013312, intron 19 of 22) intron (NM_013312, intron 19 of 22) 10620 NM_013312 29911 Hs.30792 NM_013312 ENSG00000095066 HOOK2 HK2 hook microtubule tethering protein 2 protein-coding chr9-4143 chr9 136622289 136622499 + 9.66 0.000 Intergenic Intergenic -5213 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr1-15767 chr1 174408342 174408552 + 9.66 0.000 intron (NM_001366446, intron 13 of 25) L1PA16|LINE|L1 -39517 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr14-3024 chr14 55446873 55447083 + 9.66 0.000 Intergenic Intergenic -6433 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr5-2634 chr5 174843912 174844122 + 9.66 0.000 Intergenic Intergenic 92283 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr4-4324 chr4 32578847 32579057 + 9.66 0.000 Intergenic Intergenic 227914 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr3-2806 chr3 9349638 9349848 + 9.66 0.000 Intergenic Intergenic -13311 NM_001114092 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding chr9-6022 chr9 135692168 135692378 + 9.66 0.000 Intergenic Intergenic 7208 NM_001012415 402381 Hs.120464 NM_001012415 ENSG00000165643 SOHLH1 C9orf157|NOHLH|ODG5|SPATA27|SPGF32|TEB2|bA100C15.3|bHLHe80 spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein-coding chr5-2400 chr5 105924372 105924582 + 9.66 0.000 Intergenic Intergenic 825003 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr17-3231 chr17 17051810 17052020 + 9.66 0.000 intron (NM_201274, intron 1 of 23) intron (NM_201274, intron 1 of 23) 9155 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr19-3194 chr19 47351571 47351781 + 9.66 0.000 intron (NM_014681, intron 1 of 16) MLT1K|LTR|ERVL-MaLR 2361 NM_014681 9704 Hs.151706 NM_014681 ENSG00000134815 DHX34 DDX34|HRH1 DExH-box helicase 34 protein-coding chr19-2168 chr19 11849379 11849589 + 9.66 0.000 intron (NM_001348725, intron 1 of 2) MER49|LTR|ERV1 751 NM_001348720 90594 Hs.528731 NM_152262 ENSG00000171291 ZNF439 - zinc finger protein 439 protein-coding chr8-3564 chr8 129164369 129164579 + 9.66 0.000 Intergenic UCON26|Unknown|Unknown 76766 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA chr9-3368 chr9 124218848 124219058 + 9.66 0.000 Intergenic Intergenic -38653 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr22-4318 chr22 50453402 50453612 + 9.66 0.000 intron (NM_001365819, intron 35 of 39) AluY|SINE|Alu 21528 NM_002972 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr4-4203 chr4 14334323 14334533 + 9.66 0.000 Intergenic L1PA16|LINE|L1 222460 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr14-5053 chr14 81517449 81517659 + 9.66 0.000 intron (NM_005065, intron 3 of 20) MER68-int|LTR|ERVL 16299 NM_005065 6400 Hs.181300 NM_005065 ENSG00000071537 SEL1L Hrd3|PRO1063|SEL1-LIKE|SEL1L1 SEL1L adaptor subunit of ERAD E3 ubiquitin ligase protein-coding chr11-8615 chr11 2214572 2214782 + 9.66 0.000 Intergenic Intergenic 41614 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr22-2289 chr22 36274723 36274933 + 9.66 0.000 Intergenic HAL1|LINE|L1 12079 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr2-9211 chr2 217555937 217556147 + 9.66 0.000 intron (NR_026597, intron 2 of 12) MIR3|SINE|MIR 200551 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr7-8633 chr7 70195786 70195996 + 9.66 0.000 intron (NM_015570, intron 4 of 18) intron (NM_015570, intron 4 of 18) 597416 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chrX-2711 chrX 121201510 121201720 + 9.66 0.000 Intergenic L1PB3|LINE|L1 154005 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chrX-4456 chrX 56738753 56738963 + 9.66 0.000 intron (NM_001348129, intron 2 of 2) MER21A|LTR|ERVL -1274 NR_002308 442454 Hs.663220 NR_002308 UQCRBP1 - ubiquinol-cytochrome c reductase binding protein pseudogene 1 pseudo chr3-3603 chr3 76826443 76826653 + 9.66 0.000 Intergenic Intergenic -213551 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr1-7220 chr1 223159137 223159347 + 9.66 0.000 Intergenic Intergenic -15994 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr11-10655 chr11 127006320 127006530 + 9.66 0.000 TTS (NR_040078) TTS (NR_040078) 3515 NR_040078 283165 Hs.730461 NM_173579 ENSG00000218109 KIRREL3-AS3 NCRNA00288|PRR10 KIRREL3 antisense RNA 3 ncRNA chrX-2669 chrX 116097914 116098124 + 9.66 0.000 Intergenic AluJb|SINE|Alu -72725 NM_000686 186 Hs.405348 NM_000686 ENSG00000180772 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor type 2 protein-coding chr19-4786 chr19 33618065 33618275 + 9.66 0.000 Intergenic Intergenic -3783 NM_001127896 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr2-5720 chr2 216109073 216109283 + 9.66 0.000 promoter-TSS (NM_021141) promoter-TSS (NM_021141) -170 NM_021141 7520 Hs.388739 NM_021141 ENSG00000079246 XRCC5 KARP-1|KARP1|KU80|KUB2|Ku86|NFIV X-ray repair cross complementing 5 protein-coding chr12-5232 chr12 108289964 108290174 + 9.66 0.000 3' UTR (NM_001142344, exon 3 of 3) 3' UTR (NM_001142344, exon 3 of 3) 30593 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr6-5404 chr6 155177433 155177643 + 9.66 0.000 intron (NM_012454, intron 9 of 25) intron (NM_012454, intron 9 of 25) -39428 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr10-5383 chr10 74237071 74237281 + 9.66 0.000 intron (NM_001369124, intron 3 of 9) Tigger1|DNA|TcMar-Tigger 60413 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr2-7810 chr2 45570252 45570462 + 9.66 0.000 intron (NM_018079, intron 9 of 20) L1MC4|LINE|L1 40910 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr1-10914 chr1 209079431 209079641 + 9.66 0.000 Intergenic Intergenic 107082 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr1-9570 chr1 42654593 42654803 + 9.66 0.000 TTS (NM_001355227) TTS (NM_001355227) -3725 NM_001330510 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chrX-2828 chrX 136669049 136669259 + 9.66 0.000 intron (NM_001306177, intron 20 of 20) intron (NM_001306177, intron 20 of 20) 20977 NM_000074 959 Hs.592244 NM_000074 ENSG00000102245 CD40LG CD154|CD40L|HIGM1|IGM|IMD3|T-BAM|TNFSF5|TRAP|gp39|hCD40L CD40 ligand protein-coding chr15-2504 chr15 33348118 33348328 + 9.66 0.000 intron (NM_001243996, intron 1 of 102) L1MC3|LINE|L1 37256 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr17-3401 chr17 2745699 2745909 + 9.66 0.000 intron (NM_001355573, intron 1 of 3) intron (NM_001355573, intron 1 of 3) 2378 NR_031654 100302208 NR_031654 ENSG00000221200 MIR1253 MIRN1253|hsa-mir-1253 microRNA 1253 ncRNA chr5-1792 chr5 54148421 54148631 + 9.66 0.000 intron (NM_019087, intron 3 of 4) intron (NM_019087, intron 3 of 4) 162047 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr11-3846 chr11 71447305 71447515 + 9.66 0.000 intron (NM_001360, intron 2 of 8) intron (NM_001360, intron 2 of 8) 983 NM_001163817 1717 Hs.503134 NM_001360 ENSG00000172893 DHCR7 SLOS 7-dehydrocholesterol reductase protein-coding chr5-7485 chr5 34609171 34609381 + 9.66 0.000 Intergenic Intergenic -47052 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5-4146 chr5 91212708 91212918 + 9.66 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 101589 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr4-4173 chr4 9846221 9846431 + 9.66 0.000 intron (NM_001001290, intron 11 of 12) intron (NM_001001290, intron 11 of 12) 64692 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr7-7583 chr7 124606279 124606489 + 9.66 0.000 Intergenic Intergenic 159408 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr7-6599 chr7 95322963 95323173 + 9.66 0.000 intron (NM_000446, intron 1 of 8) MER5A1|DNA|hAT-Charlie 1464 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr3-8422 chr3 109644916 109645126 + 9.66 0.000 Intergenic MIR3|SINE|MIR 42193 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr12-4715 chr12 50157725 50157935 + 9.66 0.000 intron (NM_001331069, intron 1 of 11) AluJb|SINE|Alu 9539 NM_001331073 91012 Hs.270525 NM_147190 ENSG00000139624 CERS5 LASS5|Trh4 ceramide synthase 5 protein-coding chr13-2487 chr13 51838377 51838587 + 9.66 0.000 exon (NM_001351003, exon 2 of 5) exon (NM_001351003, exon 2 of 5) 6695 NM_001351003 283521 Hs.649896 NM_178515 ENSG00000281106 TMEM272 LINC00282|NCRNA00282 transmembrane protein 272 protein-coding chr11-8070 chr11 32960147 32960357 + 9.66 0.000 intron (NM_001076786, intron 8 of 12) intron (NM_001076786, intron 8 of 12) -55626 NM_001077242 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chr13-2904 chr13 113324301 113324511 + 9.66 0.000 TTS (NM_001286732) TTS (NM_001286732) 27167 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr3-7128 chr3 184277334 184277544 + 9.66 0.000 exon (NM_001100120, exon 4 of 19) exon (NM_001100120, exon 4 of 19) 1417 NM_001037324 9718 Hs.146161 NM_001037324 ENSG00000145194 ECE2 EEF1AKMT4 endothelin converting enzyme 2 protein-coding chr3-4492 chr3 56476195 56476405 + 9.66 0.000 Intergenic AluJr|SINE|Alu -7833 NR_132749 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr11-6440 chr11 66557868 66558078 + 9.66 0.000 intron (NR_047663, intron 10 of 20) intron (NR_047663, intron 10 of 20) 10633 NM_003793 8722 Hs.11590 NM_003793 ENSG00000174080 CTSF CATSF|CLN13 cathepsin F protein-coding chr21-636 chr21 46136910 46137120 + 9.66 0.000 exon (NM_206965, exon 14 of 14) exon (NM_206965, exon 14 of 14) -14360 NM_001350598 100861507 Hs.570448 NM_001350598 FTCD-AS1 - FTCD antisense RNA 1 protein-coding chr8-2689 chr8 92637189 92637399 + 9.66 0.000 intron (NR_125827, intron 2 of 4) intron (NR_125827, intron 2 of 4) 18200 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr8-6972 chr8 107282898 107283108 + 9.66 0.000 intron (NM_001199859, intron 7 of 8) intron (NM_001199859, intron 7 of 8) 53512 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr6-8346 chr6 147759178 147759388 + 9.66 0.000 Intergenic Intergenic 250593 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chrX-3034 chrX 84348164 84348374 + 9.66 0.000 intron (NM_001177478, intron 5 of 9) L1MD2|LINE|L1 -122441 NR_031690 100302191 NR_031690 ENSG00000221494 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA chr9-5130 chr9 36500293 36500503 + 9.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -72464 NM_001256691 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr4-4504 chr4 61204448 61204658 + 9.66 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 2381 NM_001371342 chr16-2907 chr16 1206035 1206245 + 9.66 0.000 exon (NM_021098, exon 12 of 35) exon (NM_021098, exon 12 of 35) 19128 NM_012467 25823 Hs.592076 NM_012467 ENSG00000116176 TPSG1 PRSS31|TMT|trpA tryptase gamma 1 protein-coding chr11-4053 chr11 14096597 14096807 + 9.66 0.000 intron (NM_006108, intron 5 of 15) LTR33|LTR|ERVL 133979 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr7-9194 chr7 116043494 116043704 + 9.66 0.000 Intergenic Intergenic -12836 NM_001018058 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr7-6386 chr7 151934238 151934448 + 9.66 0.000 Intergenic L1ME3Cz|LINE|L1 -22103 NR_033169 168391 Hs.647077 NM_145292 ENSG00000106648 GALNTL5 GALNACT19|GALNT15|GalNAc-T5L polypeptide N-acetylgalactosaminyltransferase like 5 protein-coding chr13-1418 chr13 35179083 35179293 + 9.66 0.000 intron (NM_015678, intron 28 of 57) MIRb|SINE|MIR 236901 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr2-3959 chr2 68908551 68908761 + 9.66 0.000 Intergenic Intergenic -37259 NM_014482 27302 Hs.158317 NM_014482 ENSG00000163217 BMP10 - bone morphogenetic protein 10 protein-coding chr13-2459 chr13 49830729 49830939 + 9.66 0.000 Intergenic Intergenic -38152 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr2-4049 chr2 111938728 111938938 + 9.66 0.000 intron (NM_006343, intron 2 of 18) L1ME4b|LINE|L1 40226 NM_006343 10461 Hs.306178 NM_006343 ENSG00000153208 MERTK MER|RP38|Tyro12|c-Eyk|c-mer MER proto-oncogene, tyrosine kinase protein-coding chr3-3545 chr3 47760039 47760249 + 9.66 0.000 intron (NM_003074, intron 2 of 27) AluSz|SINE|Alu 21749 NM_003074 6599 Hs.476179 NM_003074 ENSG00000173473 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding chr17-3696 chr17 16931872 16932082 + 9.66 0.000 intron (NR_147084, intron 4 of 12) intron (NR_147084, intron 4 of 12) 1199 NR_147084 96597 NR_147084 TBC1D27P TBC1D27 TBC1 domain family member 27, pseudogene pseudo chr2-8851 chr2 174059370 174059580 + 9.66 0.000 Intergenic Intergenic 34195 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr16-6488 chr16 58493490 58493700 + 9.66 0.000 intron (NM_020465, intron 2 of 15) intron (NM_020465, intron 2 of 15) -6548 NR_040072 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr16-3039 chr16 51019519 51019729 + 9.66 0.000 intron (NR_110913, intron 1 of 2) intron (NR_110913, intron 1 of 2) 1866 NR_110913 101927334 Hs.555184 NR_110913 ENSG00000261637 LINC02127 - long intergenic non-protein coding RNA 2127 ncRNA chr6-7803 chr6 98994232 98994442 + 9.66 0.000 Intergenic L2b|LINE|L2 -46331 NM_012160 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr3-3387 chr3 53427446 53427656 + 9.66 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -67060 NM_001128840 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr9-7294 chr9 8901295 8901505 + 9.66 0.000 intron (NM_002839, intron 11 of 45) intron (NM_002839, intron 11 of 45) 43382 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr1-10447 chr1 160132795 160133005 + 9.66 0.000 intron (NM_000702, intron 13 of 22) L2|LINE|L2 17141 NM_000702 477 Hs.34114 NM_000702 ENSG00000018625 ATP1A2 FHM2|MHP2 ATPase Na+/K+ transporting subunit alpha 2 protein-coding chr14-4450 chr14 33489266 33489476 + 9.66 0.000 intron (NM_001165893, intron 3 of 10) intron (NM_001165893, intron 3 of 10) -219566 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr3-6301 chr3 75019832 75020042 + 9.66 0.000 Intergenic Intergenic -194539 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr2-7843 chr2 47601351 47601561 + 9.66 0.000 Intergenic Intergenic -31125 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr2-7552 chr2 23762737 23762947 + 9.66 0.000 intron (NR_125717, intron 24 of 28) L2c|LINE|L2 164281 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr2-7961 chr2 63275827 63276037 + 9.66 0.000 intron (NR_148704, intron 14 of 18) L1PB1|LINE|L1 -156390 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr7-2225 chr7 128894198 128894408 + 9.66 0.000 intron (NM_001366122, intron 8 of 39) intron (NM_001366122, intron 8 of 39) 16406 NM_199349 375616 Hs.371746 NM_199349 ENSG00000135253 KCP CRIM2|KCP1|NET67 kielin cysteine rich BMP regulator protein-coding chr5-2202 chr5 163889391 163889601 + 9.66 0.000 Intergenic Intergenic 383877 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr16-2590 chr16 86383873 86384083 + 9.66 0.000 Intergenic Charlie19a|DNA|hAT-Charlie -38299 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr7-4339 chr7 45138044 45138254 + 9.66 0.000 Intergenic AluSq2|SINE|Alu -19642 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr13-3080 chr13 44398049 44398259 + 9.66 0.000 TTS (NM_001346980) TTS (NM_001346980) 7830 NR_104174 400128 Hs.438480 NR_104174 ENSG00000237361 TUSC8 LINC01071|XLOC_010588 tumor suppressor candidate 8 ncRNA chr2-9128 chr2 208375637 208375847 + 9.66 0.000 intron (NM_001309516, intron 1 of 12) intron (NM_001309516, intron 1 of 12) 16050 NM_001309516 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr13-2005 chr13 34863741 34863951 + 9.66 0.000 Intergenic Intergenic -78441 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr11-4825 chr11 11219158 11219368 + 9.66 0.000 Intergenic Intergenic 133987 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr11-6504 chr11 68706818 68707028 + 9.66 0.000 TTS (NM_004923) TTS (NM_004923) 22379 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr7-8130 chr7 27435151 27435361 + 9.66 0.000 Intergenic Intergenic -180718 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr19-5141 chr19 3203684 3203894 + 9.66 0.000 exon (NM_001321463, exon 7 of 15) exon (NM_001321463, exon 7 of 15) 17859 NM_001321463 56926 Hs.657032 NM_020170 ENSG00000125912 NCLN NET59 nicalin protein-coding chr20-1041 chr20 57530171 57530381 + 9.66 0.000 Intergenic Intergenic -4624 NM_001269045 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr8-5230 chr8 122491607 122491817 + 9.66 0.000 intron (NR_131202, intron 2 of 3) L2a|LINE|L2 76932 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr1-3501 chr1 153536043 153536253 + 9.66 0.000 promoter-TSS (NM_014624) promoter-TSS (NM_014624) -157 NM_014624 6277 Hs.275243 NM_014624 ENSG00000197956 S100A6 2A9|5B10|CABP|CACY|PRA|S10A6 S100 calcium binding protein A6 protein-coding chr7-2948 chr7 151149714 151149924 + 9.66 0.000 intron (NM_001098834, intron 1 of 1) intron (NM_001098834, intron 1 of 1) 17729 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr5-3208 chr5 82131574 82131784 + 9.66 0.000 intron (NM_031482, intron 3 of 7) MIR|SINE|MIR 146675 NM_001025 6228 Hs.527193 NM_001025 ENSG00000186468 RPS23 BTDD|MABAS|MCINS|PAMAS|S23|uS12 ribosomal protein S23 protein-coding chr17-4554 chr17 79540358 79540568 + 9.66 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) -24315 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-12901 chr1 113142946 113143156 + 9.66 0.000 Intergenic Intergenic 63202 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr1-6953 chr1 156472371 156472581 + 9.66 0.000 intron (NM_005920, intron 9 of 11) intron (NM_005920, intron 9 of 11) 18211 NM_001271629 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr17-6040 chr17 79148565 79148775 + 9.66 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 73733 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr1-6393 chr1 10658055 10658265 + 9.66 0.000 intron (NM_001079843, intron 7 of 20) intron (NM_001079843, intron 7 of 20) 138486 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr2-3537 chr2 8607637 8607847 + 9.66 0.000 Intergenic Intergenic -23950 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr16-4634 chr16 72877529 72877739 + 9.66 0.000 intron (NM_001164766, intron 3 of 8) intron (NM_001164766, intron 3 of 8) 170494 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr4-2369 chr4 6664164 6664374 + 9.66 0.000 Intergenic CpG 9612 NR_134664 105374366 Hs.438950 NR_134664 ENSG00000251580 LINC02482 - long intergenic non-protein coding RNA 2482 ncRNA chr17-5727 chr17 57760896 57761106 + 9.66 0.000 Intergenic Intergenic -15702 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr15-3658 chr15 96317219 96317429 + 9.66 0.000 intron (NR_102744, intron 1 of 1) intron (NR_102744, intron 1 of 1) -8722 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr13-759 chr13 98253069 98253279 + 9.66 0.000 intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 44650 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr9-5133 chr9 36808090 36808300 + 9.66 0.000 Intergenic Intergenic 15404 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr16-6967 chr16 86135756 86135966 + 9.66 0.000 Intergenic MIR|SINE|MIR -60320 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr10-4956 chr10 28367602 28367812 + 9.66 0.000 Intergenic AluJr|SINE|Alu -64643 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr4-4725 chr4 90709777 90709987 + 9.66 0.000 intron (NM_207491, intron 6 of 7) L1PA11|LINE|L1 474851 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr11-5979 chr11 19097330 19097540 + 9.66 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -19710 NM_001001483 54503 Hs.188569 NM_019028 ENSG00000177054 ZDHHC13 HIP14L|HIP3RP zinc finger DHHC-type containing 13 protein-coding chrX-2448 chrX 81242987 81243197 + 9.66 0.000 intron (NM_003022, intron 1 of 3) L1MA2|LINE|L1 40990 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr16-5613 chr16 57689433 57689643 + 9.66 0.000 TTS (NM_170776) TTS (NM_170776) -5268 NM_001289163 84229 Hs.513635 NM_032269 ENSG00000159625 DRC7 C16orf50|CCDC135|CFAP50|FAP50 dynein regulatory complex subunit 7 protein-coding chr12-7016 chr12 32533242 32533452 + 9.66 0.000 promoter-TSS (NM_001304480) promoter-TSS (NM_001304480) -946 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr5-3489 chr5 172821876 172822086 + 9.66 0.000 Intergenic L1MC4|LINE|L1 -12270 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr11-3183 chr11 64022071 64022281 + 9.66 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) 36323 NM_017670 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr20-3977 chr20 35240778 35240988 + 9.66 0.000 intron (NM_001355008, intron 2 of 14) L2c|LINE|L2 14193 NM_006690 10893 Hs.715494 NM_006690 ENSG00000125966 MMP24 MMP-24|MMP25|MT-MMP 5|MT-MMP5|MT5-MMP|MT5MMP|MTMMP5 matrix metallopeptidase 24 protein-coding chr3-7246 chr3 195286337 195286547 + 9.66 0.000 intron (NM_012287, intron 21 of 22) intron (NM_012287, intron 21 of 22) -15283 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr19-3035 chr19 485766 485976 + 9.66 0.000 Intergenic Intergenic -10615 NM_130760 8174 Hs.102598 NM_130760 ENSG00000099866 MADCAM1 MACAM1 mucosal vascular addressin cell adhesion molecule 1 protein-coding chr20-2426 chr20 23508042 23508252 + 9.66 0.000 Intergenic LTR33|LTR|ERVL -10999 NR_001279 164380 Hs.400007 NR_001279 ENSG00000204663 CST13P CSTT|CTES6 cystatin 13, pseudogene pseudo chr3-6980 chr3 167795391 167795601 + 9.66 0.000 intron (NM_001122752, intron 5 of 8) L2c|LINE|L2 59773 NM_005025 5274 Hs.478153 NM_005025 ENSG00000163536 SERPINI1 PI12|neuroserpin serpin family I member 1 protein-coding chr8-4135 chr8 74308238 74308448 + 9.66 0.000 intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 13018 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr15-3112 chr15 65083813 65084023 + 9.66 0.000 Intergenic Intergenic 7102 NM_001101362 390594 Hs.586890 NM_001101362 ENSG00000234438 KBTBD13 HCG1645727|NEM6 kelch repeat and BTB domain containing 13 protein-coding chr7-8129 chr7 27431602 27431812 + 9.66 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -184267 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr17-2422 chr17 82322387 82322597 + 9.66 0.000 intron (NM_003004, intron 4 of 4) intron (NM_003004, intron 4 of 4) -4884 NM_006137 924 Hs.36972 NM_006137 ENSG00000173762 CD7 GP40|LEU-9|TP41|Tp40 CD7 molecule protein-coding chr16-6125 chr16 19330753 19330963 + 9.66 0.000 Intergenic Intergenic 45127 NM_001256720 728276 Hs.632180 NM_001256720 ENSG00000261210 CLEC19A - C-type lectin domain containing 19A protein-coding chr3-10911 chr3 172058264 172058474 + 9.66 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 17838 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr10-6319 chr10 114758217 114758427 + 9.66 0.000 intron (NM_001322886, intron 1 of 20) intron (NM_001322886, intron 1 of 20) -6466 NR_120628 101927692 Hs.576909 NR_120628 ENSG00000228484 LOC101927692 - uncharacterized LOC101927692 ncRNA chr1-9961 chr1 79570728 79570938 + 9.66 0.000 Intergenic L2a|LINE|L2 -564103 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr11-3728 chr11 19244749 19244959 + 9.66 0.000 Intergenic Intergenic -3199 NM_001256372 79733 Hs.523526 NM_024680 ENSG00000129173 E2F8 E2F-8 E2F transcription factor 8 protein-coding chr14-1856 chr14 69737290 69737500 + 9.66 0.000 Intergenic Intergenic -29747 NM_001039465 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chrX-659 chrX 120244798 120245008 + 9.66 0.000 non-coding (NR_027131, exon 1 of 3) non-coding (NR_027131, exon 1 of 3) 364 NR_027131 158801 Hs.442518 NM_173522 ENSG00000233382 NKAPP1 CXorf42 NFKB activating protein pseudogene 1 pseudo chr9-3063 chr9 137160044 137160254 + 9.66 0.000 intron (NM_001185091, intron 9 of 19) intron (NM_001185091, intron 9 of 19) 9121 NR_037416 100500811 NR_037416 ENSG00000263697 MIR3621 - microRNA 3621 ncRNA chrX-1916 chrX 150393458 150393668 + 9.66 0.000 intron (NM_001177465, intron 1 of 4) L1MC1|LINE|L1 30246 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr8-3021 chr8 124015152 124015362 + 9.66 0.000 intron (NR_040044, intron 2 of 5) MLT1F2|LTR|ERVL-MaLR 25525 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr4-3373 chr4 11187787 11187997 + 9.66 0.000 Intergenic Intergenic -180935 NR_030298 693157 NR_030298 ENSG00000207716 MIR572 MIRN572|hsa-mir-572 microRNA 572 ncRNA chr5-8166 chr5 103687659 103687869 + 9.66 0.000 Intergenic MSTB|LTR|ERVL-MaLR -124975 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr17-3733 chr17 21732700 21732910 + 9.66 0.000 Intergenic MER1B|DNA|hAT-Charlie 40282 NM_001194958 100134444 Hs.200629 NM_001194958 ENSG00000260458 KCNJ18 KIR2.6|TTPP2 potassium voltage-gated channel subfamily J member 18 protein-coding chr1-5017 chr1 74194026 74194236 + 9.66 0.000 intron (NM_001105659, intron 1 of 7) AluJo|SINE|Alu 4045 NM_001322315 127255 Hs.644625 NM_145258 ENSG00000162620 LRRIQ3 LRRC44 leucine rich repeats and IQ motif containing 3 protein-coding chr18-1972 chr18 38448135 38448345 + 9.66 0.000 Intergenic Intergenic 791105 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr22-1784 chr22 29588068 29588278 + 9.66 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -7060 NM_003634 8508 Hs.173878 NM_003634 ENSG00000184117 NIPSNAP1 - nipsnap homolog 1 protein-coding chr19-3198 chr19 47822615 47822825 + 9.66 0.000 intron (NM_000554, intron 1 of 3) intron (NM_000554, intron 1 of 3) 783 NM_000554 1406 Hs.617342 NM_000554 ENSG00000105392 CRX CORD2|CRD|LCA7|OTX3 cone-rod homeobox protein-coding chr17-3306 chr17 61833581 61833791 + 9.66 0.000 intron (NM_032043, intron 6 of 19) AluSx1|SINE|Alu 29873 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding chr15-4137 chr15 84815084 84815294 + 9.66 0.000 Intergenic L2c|LINE|L2 -1491 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 CMH27|MAK|MIDORI alpha kinase 3 protein-coding chr9-5516 chr9 106105781 106105991 + 9.66 0.000 Intergenic AluSq2|SINE|Alu 411345 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr11-6873 chr11 102026843 102027053 + 9.66 0.000 Intergenic MamRTE1|LINE|RTE-BovB -20489 NM_001195005 85016 Hs.98328 NM_032930 ENSG00000137691 CFAP300 C11orf70|CILD38 cilia and flagella associated protein 300 protein-coding chr5-4812 chr5 58775819 58776029 + 9.66 0.000 intron (NM_138453, intron 3 of 4) intron (NM_138453, intron 3 of 4) 192849 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr12-5229 chr12 108158536 108158746 + 9.66 0.000 intron (NM_001304447, intron 1 of 9) MIRb|SINE|MIR 26855 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr1-4438 chr1 235649112 235649322 + 9.66 0.000 intron (NM_001098721, intron 1 of 3) CpG 567 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr1-14746 chr1 67371634 67371844 + 9.66 0.000 intron (NM_001258215, intron 10 of 13) intron (NM_001258215, intron 10 of 13) 58663 NM_001018067 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr17-4495 chr17 68423144 68423354 + 9.66 0.000 TTS (NM_001352901) TTS (NM_001352901) 1299 NR_030365 693220 NR_030365 ENSG00000207561 MIR635 MIRN635|hsa-mir-635 microRNA 635 ncRNA chr12-4812 chr12 56167655 56167865 + 9.66 0.000 intron (NM_001330288, intron 26 of 28) intron (NM_001330288, intron 26 of 28) 9401 NM_021019 4637 Hs.632717 NM_021019 ENSG00000092841 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin light chain 6 protein-coding chr11-7259 chr11 16109102 16109312 + 9.66 0.000 intron (NM_033326, intron 7 of 15) AluJb|SINE|Alu -139586 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr3-6020 chr3 49211356 49211566 + 9.66 0.000 intron (NM_001135197, intron 1 of 7) L1MC|LINE|L1 11963 NM_001135197 339834 Hs.631931 NM_178173 ENSG00000173421 CCDC36 CT74 coiled-coil domain containing 36 protein-coding chr21-396 chr21 36966172 36966382 + 9.66 0.000 intron (NM_001352515, intron 1 of 10) CpG 392 NM_001242784 3141 Hs.371350 NM_000411 ENSG00000159267 HLCS HCS holocarboxylase synthetase protein-coding chr7-6695 chr7 1257341 1257551 + 9.66 0.000 Intergenic Intergenic 24574 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr6-5056 chr6 113909312 113909522 + 9.66 0.000 intron (NR_027060, intron 1 of 3) intron (NR_027060, intron 1 of 3) 5030 NR_027060 285759 Hs.376634 NM_173673 ENSG00000175967 FLJ34503 - uncharacterized FLJ34503 ncRNA chr8-5829 chr8 5336808 5337018 + 9.66 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -341999 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr5-1931 chr5 178142245 178142455 + 9.66 0.000 intron (NM_001288794, intron 4 of 11) MIRc|SINE|MIR 11336 NM_022762 64777 Hs.27222 NM_022762 ENSG00000145916 RMND5B GID2|GID2B required for meiotic nuclear division 5 homolog B protein-coding chr3-2531 chr3 41200554 41200764 + 9.66 0.000 intron (NM_001904, intron 1 of 14) intron (NM_001904, intron 1 of 14) 1154 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr3-3588 chr3 60043531 60043741 + 9.66 0.000 intron (NM_001320901, intron 2 of 6) intron (NM_001320901, intron 2 of 6) 37273 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr16-2476 chr16 87779189 87779399 + 9.66 0.000 promoter-TSS (NR_120309) promoter-TSS (NR_120309) -146 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA chr10-3349 chr10 14254457 14254667 + 9.66 0.000 intron (NR_134578, intron 2 of 3) LTR78B|LTR|ERV1 76322 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr7-9235 chr7 120591528 120591738 + 9.66 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 266511 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr15-4088 chr15 73186785 73186995 + 9.66 0.000 intron (NM_002499, intron 7 of 28) MER58A|DNA|hAT-Charlie -113020 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr12-3139 chr12 42473098 42473308 + 9.66 0.000 intron (NM_153026, intron 1 of 7) intron (NM_153026, intron 1 of 7) 10412 NM_001144881 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr12-1959 chr12 114692954 114693164 + 9.66 0.000 Intergenic Intergenic -8884 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr6-8223 chr6 136205217 136205427 + 9.66 0.000 Intergenic L2c|LINE|L2 44989 NM_001099286 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr19-4990 chr19 46772274 46772484 + 9.66 0.000 Intergenic AluSx3|SINE|Alu 12435 NM_001145145 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding chr2-6837 chr2 68829442 68829652 + 9.66 0.000 Intergenic Intergenic 41850 NM_014482 27302 Hs.158317 NM_014482 ENSG00000163217 BMP10 - bone morphogenetic protein 10 protein-coding chr1-5255 chr1 203267403 203267613 + 9.66 0.000 Intergenic LTR41B|LTR|ERVL -19644 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr16-2277 chr16 2912505 2912715 + 9.66 0.000 intron (NM_020912, intron 1 of 8) intron (NM_020912, intron 1 of 8) 631 NM_020912 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr1-9666 chr1 48510189 48510399 + 9.66 0.000 Intergenic HERV16-int|LTR|ERVL -38086 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr1-6218 chr1 213613306 213613516 + 9.66 0.000 Intergenic Intergenic -311338 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr8-3265 chr8 13377016 13377226 + 9.66 0.000 intron (NM_024767, intron 4 of 4) intron (NM_024767, intron 4 of 4) -100337 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr12-6335 chr12 55670384 55670594 + 9.66 0.000 Intergenic Intergenic -11247 NM_152637 196410 Hs.51483 NM_152637 ENSG00000170439 METTL7B ALDI methyltransferase like 7B protein-coding chr6-7362 chr6 48135654 48135864 + 9.66 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -67070 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr10-1559 chr10 123913899 123914109 + 9.66 0.000 Intergenic Intergenic -22197 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr2-10254 chr2 118821208 118821418 + 9.66 0.000 Intergenic Intergenic 26870 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr4-7601 chr4 81671234 81671444 + 9.66 0.000 Intergenic Intergenic -199432 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr7-4371 chr7 71868987 71869197 + 9.66 0.000 intron (NM_001363460, intron 4 of 5) intron (NM_001363460, intron 4 of 5) 468299 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr9-3810 chr9 128683681 128683891 + 9.66 0.000 promoter-TSS (NM_001122821) promoter-TSS (NM_001122821) -7 NM_001122821 6418 Hs.436687 NM_003011 ENSG00000119335 SET 2PP2A|I2PP2A|IGAAD|IPP2A2|MRD58|PHAPII|TAF-I|TAF-IBETA SET nuclear proto-oncogene protein-coding chr11-10310 chr11 108315098 108315308 + 9.66 0.000 intron (NM_001351834, intron 41 of 63) Tigger2b_Pri|DNA|TcMar-Tigger 91674 NM_001351836 472 Hs.367437 NM_000051 ENSG00000149311 ATM AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1 ATM serine/threonine kinase protein-coding chr7-5449 chr7 38938696 38938906 + 9.66 0.000 Intergenic MER102b|DNA|hAT-Charlie -29601 NM_080631 27072 Hs.592184 NM_014396 ENSG00000006715 VPS41 HVPS41|HVSP41|hVps41p VPS41 subunit of HOPS complex protein-coding chr10-8280 chr10 76756986 76757196 + 9.66 0.000 Intergenic L1MD3|LINE|L1 -130953 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr13-4208 chr13 92771095 92771305 + 9.66 0.000 intron (NM_004466, intron 7 of 7) L1MDa|LINE|L1 -49586 NR_046520 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA chr3-3384 chr3 50666809 50667019 + 9.66 0.000 Intergenic Intergenic -8013 NM_004947 1795 Hs.476284 NM_004947 ENSG00000088538 DOCK3 MOCA|NEDIDHA|PBP dedicator of cytokinesis 3 protein-coding chr12-7613 chr12 79364574 79364784 + 9.66 0.000 intron (NM_001291901, intron 8 of 9) intron (NM_001291901, intron 8 of 9) -54578 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr7-5638 chr7 54720753 54720963 + 9.66 0.000 Intergenic MIR|SINE|MIR 38353 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr9-2363 chr9 111952572 111952782 + 9.66 0.000 Intergenic Intergenic 20577 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr1-3366 chr1 110312673 110312883 + 9.66 0.000 intron (NR_036595, intron 2 of 3) intron (NR_036595, intron 2 of 3) 26393 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 RBM15-AS1 AS-RBM15 RBM15 antisense RNA 1 ncRNA chr5-5275 chr5 122559784 122559994 + 9.66 0.000 Intergenic Intergenic 24711 NR_134281 101927357 Hs.639856 NR_134281 LOC101927357 - uncharacterized LOC101927357 ncRNA chr19-2370 chr19 2383943 2384153 + 9.66 0.000 Intergenic Intergenic -5723 NM_182973 360200 Hs.465560 NM_182973 ENSG00000178297 TMPRSS9 - transmembrane serine protease 9 protein-coding chr12-5396 chr12 121051141 121051351 + 9.66 0.000 Intergenic Intergenic -12004 NM_001261825 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr5-4396 chr5 178084077 178084287 + 9.66 0.000 Intergenic Intergenic -29350 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr4-3025 chr4 129749060 129749270 + 9.66 0.000 intron (NR_110753, intron 2 of 4) MLT1K|LTR|ERVL-MaLR 22313 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr2-5407 chr2 109736430 109736640 + 9.66 0.000 Intergenic Intergenic -56223 NM_032260 84220 Hs.469630 NM_005054 ENSG00000015568 RGPD5 BS-63|BS63|HEL161|RGP5 RANBP2 like and GRIP domain containing 5 protein-coding chr5-2153 chr5 98108328 98108538 + 9.66 0.000 intron (NR_146477, intron 3 of 4) intron (NR_146477, intron 3 of 4) 52806 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr17-8110 chr17 57225050 57225260 + 9.66 0.000 Intergenic AluJb|SINE|Alu -30696 NM_001322250 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr22-2261 chr22 29944544 29944754 + 9.66 0.000 intron (NM_153051, intron 1 of 18) intron (NM_153051, intron 1 of 18) 61475 NM_153051 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding chr2-14300 chr2 216681127 216681337 + 9.66 0.000 intron (NM_000599, intron 1 of 3) intron (NM_000599, intron 1 of 3) 14317 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr1-11574 chr1 201845987 201846197 + 9.66 0.000 intron (NM_018085, intron 1 of 23) AluJo|SINE|Alu -16533 NR_046696 100873949 Hs.604842 NR_046696 ENSG00000231871 IPO9-AS1 - IPO9 antisense RNA 1 ncRNA chr4-4592 chr4 76261942 76262152 + 9.66 0.000 intron (NM_001242939, intron 2 of 6) Ricksha|DNA|MULE-MuDR 10326 NM_001136570 100129583 Hs.720509 NM_001136570 ENSG00000189157 FAM47E - family with sequence similarity 47 member E protein-coding chr1-1126 chr1 149917778 149917988 + 9.66 0.000 promoter-TSS (NM_001328674) promoter-TSS (NM_001328674) -39 NM_014849 9900 Hs.516153 NM_014849 ENSG00000159164 SV2A SV2 synaptic vesicle glycoprotein 2A protein-coding chr3-4234 chr3 139992658 139992868 + 9.66 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 57578 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr19-2951 chr19 7478239 7478449 + 9.66 0.000 exon (NM_001270539, exon 4 of 5) exon (NM_001270539, exon 4 of 5) 10691 NM_080662 92960 Hs.515100 NM_080662 ENSG00000104883 PEX11G - peroxisomal biogenesis factor 11 gamma protein-coding chr2-7190 chr2 211782181 211782391 + 9.66 0.000 intron (NM_001042599, intron 4 of 26) MER76|LTR|ERVL 644074 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr1-9203 chr1 22226920 22227130 + 9.66 0.000 Intergenic L2a|LINE|L2 -39214 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr1-10209 chr1 113433392 113433602 + 9.66 0.000 intron (NM_001142782, intron 1 of 20) intron (NM_001142782, intron 1 of 20) 42982 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr1-8801 chr1 1840983 1841193 + 9.66 0.000 intron (NM_001282538, intron 1 of 9) AluSc5|SINE|Alu 49999 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr11-3348 chr11 119832581 119832791 + 9.66 0.000 Intergenic Intergenic 103103 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr2-3229 chr2 231614528 231614738 + 9.66 0.000 Intergenic CpG 21769 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr8-3157 chr8 86941742 86941952 + 9.66 0.000 intron (NM_173538, intron 4 of 10) intron (NM_173538, intron 4 of 10) 75432 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr10-4881 chr10 17951662 17951872 + 9.66 0.000 promoter-TSS (NM_152725) promoter-TSS (NM_152725) -72 NM_001282733 221074 Hs.350895 NM_152725 ENSG00000148482 SLC39A12 LZT-Hs8|ZIP-12|bA570F3.1 solute carrier family 39 member 12 protein-coding chr20-2805 chr20 57061381 57061591 + 9.66 0.000 Intergenic Intergenic -152210 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr8-5200 chr8 108355438 108355648 + 9.66 0.000 Intergenic Intergenic -88040 NM_001329494 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr5-3389 chr5 141992325 141992535 + 9.66 0.000 Intergenic Intergenic 20597 NM_005471 10007 Hs.633853 NM_005471 ENSG00000113552 GNPDA1 GNP1|GNPDA|GNPI|GPI|HLN glucosamine-6-phosphate deaminase 1 protein-coding chr11-4128 chr11 43825224 43825434 + 9.66 0.000 intron (NM_016142, intron 6 of 10) intron (NM_016142, intron 6 of 10) -55502 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr17-3567 chr17 79587124 79587334 + 9.66 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 23822 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr11-6731 chr11 81989158 81989368 + 9.66 0.000 intron (NR_120571, intron 6 of 7) MER49|LTR|ERV1 -98427 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr3-7495 chr3 156577796 156578006 + 9.66 0.000 Intergenic Intergenic -22701 NM_007107 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr2-8476 chr2 126099217 126099427 + 9.66 0.000 Intergenic L1MA3|LINE|L1 18663 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr7-9015 chr7 101031061 101031271 + 9.66 0.000 non-coding (NR_133665, exon 2 of 12) non-coding (NR_133665, exon 2 of 12) 11085 NM_001040105 140453 Hs.271819 NM_001004430 ENSG00000169876 MUC17 MUC-17|MUC-3|MUC3 mucin 17, cell surface associated protein-coding chr2-14236 chr2 211632723 211632933 + 9.66 0.000 intron (NM_001042599, intron 16 of 26) intron (NM_001042599, intron 16 of 26) 793532 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr5-5704 chr5 166350660 166350870 + 9.66 0.000 Intergenic AluSz|SINE|Alu 575605 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr9-4638 chr9 113168251 113168461 + 9.66 0.000 intron (NM_015258, intron 27 of 27) intron (NM_015258, intron 27 of 27) 17349 NM_001860 1318 Hs.24030 NM_001860 ENSG00000136867 SLC31A2 COPT2|CTR2|hCTR2 solute carrier family 31 member 2 protein-coding chr5-4478 chr5 8396877 8397087 + 9.66 0.000 intron (NR_039984, intron 2 of 5) intron (NR_039984, intron 2 of 5) 60582 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr8-3431 chr8 77573994 77574204 + 9.66 0.000 Intergenic L1MA3|LINE|L1 123402 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr12-3620 chr12 76725646 76725856 + 9.66 0.000 Intergenic Intergenic -38323 NM_015336 23390 Hs.4014 NM_015336 ENSG00000186908 ZDHHC17 DHHC-17|HIP14|HIP3|HSPC294|HYPH zinc finger DHHC-type containing 17 protein-coding chr9-7485 chr9 29340552 29340762 + 9.66 0.000 Intergenic AluSg4|SINE|Alu -127056 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr9-5415 chr9 95383911 95384121 + 9.66 0.000 Intergenic Intergenic -66307 NM_001243744 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr4-2422 chr4 118968150 118968360 + 9.66 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) 79401 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr15-2229 chr15 96902918 96903128 + 9.66 0.000 Intergenic Intergenic 119588 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr17-4494 chr17 68380960 68381170 + 9.66 0.000 intron (NM_001352899, intron 8 of 12) MER5A|DNA|hAT-Charlie -32558 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr11-5046 chr11 98268709 98268919 + 9.66 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -752135 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chrX-3876 chrX 4575497 4575707 + 9.66 0.000 Intergenic Intergenic 57970 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr11-5237 chr11 24078235 24078445 + 9.66 0.000 Intergenic Intergenic -418713 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr5-7876 chr5 73363973 73364183 + 9.66 0.000 Intergenic Intergenic 26172 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr17-2583 chr17 75514239 75514449 + 9.66 0.000 intron (NM_020753, intron 1 of 19) intron (NM_020753, intron 1 of 19) 1193 NM_020753 57513 Hs.274408 NM_020753 ENSG00000177303 CASKIN2 ANKS5B CASK interacting protein 2 protein-coding chr1-14640 chr1 57425089 57425299 + 9.66 0.000 promoter-TSS (NM_001365794) promoter-TSS (NM_001365794) -273 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr1-10290 chr1 150169052 150169262 + 9.66 0.000 intron (NR_135098, intron 2 of 3) ERV3-16A3_I-int|LTR|ERVL 8429 NR_135098 105371433 Hs.599366 NR_135098 LOC105371433 - uncharacterized LOC105371433 ncRNA chr10-8487 chr10 89260189 89260399 + 9.66 0.000 Intergenic L2b|LINE|L2 -8255 NM_001288979 3988 Hs.643030 NM_000235 ENSG00000107798 LIPA CESD|LAL lipase A, lysosomal acid type protein-coding chr16-4154 chr16 4981794 4982004 + 9.66 0.000 intron (NM_014692, intron 2 of 15) MIR|SINE|MIR 23569 NM_014692 9717 Hs.512856 NM_014692 ENSG00000103184 SEC14L5 PRELID4B SEC14 like lipid binding 5 protein-coding chr6-7032 chr6 24567930 24568140 + 9.66 0.000 intron (NM_001350410, intron 14 of 21) intron (NM_001350410, intron 14 of 21) 15192 NM_001252328 9856 Hs.26441 NM_014809 ENSG00000137261 KIAA0319 AAVR|DYLX2|DYX2|NMIG KIAA0319 protein-coding chr4-8458 chr4 155730253 155730463 + 9.66 0.000 3' UTR (NM_001130682, exon 10 of 10) 3' UTR (NM_001130682, exon 10 of 10) -28663 NM_000857 2983 Hs.77890 NM_000857 ENSG00000061918 GUCY1B1 GC-S-beta-1|GC-SB3|GUC1B3|GUCB3|GUCSB3|GUCY1B3 guanylate cyclase 1 soluble subunit beta 1 protein-coding chr5-3621 chr5 134592460 134592670 + 9.66 0.000 Intergenic Intergenic 40263 NM_001033503 51128 Hs.432984 NM_016103 ENSG00000152700 SAR1B ANDD|CMRD|GTBPB|SARA2 secretion associated Ras related GTPase 1B protein-coding chr14-3691 chr14 102518280 102518490 + 9.66 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -8609 NM_001348652 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr5-2584 chr5 73654247 73654457 + 9.66 0.000 intron (NM_001177693, intron 1 of 35) intron (NM_001177693, intron 1 of 35) 28194 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr7-2745 chr7 45132957 45133167 + 9.66 0.000 Intergenic Intergenic -21315 NM_001261834 9238 Hs.231411 NM_004749 ENSG00000136270 TBRG4 CPR2|FASTKD4 transforming growth factor beta regulator 4 protein-coding chr3-5063 chr3 42407915 42408125 + 9.66 0.000 intron (NM_144634, intron 1 of 4) intron (NM_144634, intron 1 of 4) 2590 NM_144634 131375 Hs.234895 NM_144634 ENSG00000157093 LYZL4 LYC4|LYZA lysozyme like 4 protein-coding chr10-5065 chr10 43321502 43321712 + 9.66 0.000 Intergenic L2|LINE|L2 -50029 NM_173160 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr15-3184 chr15 70033639 70033849 + 9.66 0.000 Intergenic Intergenic 45724 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr9-4593 chr9 96934990 96935200 + 9.66 0.000 intron (NM_001045477, intron 2 of 6) intron (NM_001045477, intron 2 of 6) 6091 NM_001045477 441457 Hs.652383 NM_001045477 ENSG00000188152 NUTM2G FAM22G|NUTMG NUT family member 2G protein-coding chr7-5827 chr7 84663615 84663825 + 9.66 0.000 Intergenic Intergenic 131244 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr3-11101 chr3 185769428 185769638 + 9.66 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) -1629 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr1-7638 chr1 5367041 5367251 + 9.66 0.000 Intergenic MER34C_|LTR|ERV1 495595 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chrX-1524 chrX 23346108 23346318 + 9.66 0.000 intron (NM_173495, intron 1 of 2) intron (NM_173495, intron 1 of 2) 11364 NM_173495 139411 Hs.319503 NM_173495 ENSG00000165186 PTCHD1 AUTSX4 patched domain containing 1 protein-coding chr1-8750 chr1 246301944 246302154 + 9.66 0.000 intron (NM_022743, intron 5 of 11) MLT1K|LTR|ERVL-MaLR 115363 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr2-3877 chr2 39504510 39504720 + 9.66 0.000 intron (NR_037875, intron 3 of 5) intron (NR_037875, intron 3 of 5) 67199 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr18-1804 chr18 13101861 13102071 + 9.66 0.000 intron (NM_032142, intron 38 of 44) intron (NM_032142, intron 38 of 44) 110604 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr15-2572 chr15 56758929 56759139 + 9.66 0.000 Intergenic Intergenic -24948 NM_001288589 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding chr3-3117 chr3 149151846 149152056 + 9.66 0.000 intron (NM_001308258, intron 5 of 15) intron (NM_001308258, intron 5 of 15) 22313 NM_001308258 84343 Hs.558314 NM_032383 ENSG00000163755 HPS3 BLOC2S1|SUTAL HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 protein-coding chr3-10863 chr3 168653829 168654039 + 9.66 0.000 intron (NR_021485, intron 5 of 15) intron (NR_021485, intron 5 of 15) 102080 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr10-2529 chr10 49535272 49535482 + 9.66 0.000 intron (NM_001277059, intron 1 of 5) intron (NM_001277059, intron 1 of 5) 3744 NM_000124 2074 Hs.49063 NM_000124 ENSG00000225830 ERCC6 ARMD5|CKN2|COFS|COFS1|CSB|CSB-PGBD3|POF11|RAD26|UVSS1 ERCC excision repair 6, chromatin remodeling factor protein-coding chr2-12173 chr2 39913806 39914016 + 9.66 0.000 Intergenic Intergenic -3723 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr4-5071 chr4 145393802 145394012 + 9.66 0.000 Intergenic HAL1|LINE|L1 -53488 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr20-4348 chr20 54557860 54558070 + 9.66 0.000 intron (NM_018431, intron 2 of 7) intron (NM_018431, intron 2 of 7) 82372 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr13-3918 chr13 57321316 57321526 + 9.66 0.000 Intergenic FLAM_A|SINE|Alu 154224 NM_001130404 729233 Hs.723090 NM_001130404 ENSG00000204918 PRR20B PRR20|PRR20A|PRR20C|PRR20D|PRR20E proline rich 20B protein-coding chr9-4893 chr9 6247771 6247981 + 9.66 0.000 promoter-TSS (NM_001353802) promoter-TSS (NM_001353802) -595 NM_001353802 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr1-3525 chr1 201512004 201512214 + 9.66 0.000 intron (NR_160747, intron 1 of 1) intron (NR_160747, intron 1 of 1) 4896 NR_160747 107985246 NR_160746 LOC107985246 - uncharacterized LOC107985246 ncRNA chr19-5101 chr19 55537779 55537989 + 9.66 0.000 promoter-TSS (NM_001370096) promoter-TSS (NM_001370096) -751 NM_001370096 646643 Hs.532676 NM_001101401 ENSG00000187550 SBK2 SGK069 SH3 domain binding kinase family member 2 protein-coding chr8-3904 chr8 40119072 40119282 + 9.66 0.000 Intergenic Intergenic -34305 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr4-6899 chr4 14153307 14153517 + 9.66 0.000 Intergenic Intergenic 41444 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr9-3042 chr9 132975671 132975881 + 9.66 0.000 intron (NM_004188, intron 3 of 10) intron (NM_004188, intron 3 of 10) -2918 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr3-5220 chr3 82801600 82801810 + 9.66 0.000 Intergenic L2a|LINE|L2 815563 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr2-3406 chr2 45496783 45496993 + 9.66 0.000 intron (NM_018079, intron 14 of 20) intron (NM_018079, intron 14 of 20) 114379 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr10-6096 chr10 132233753 132233963 + 9.66 0.000 intron (NM_001318878, intron 2 of 11) intron (NM_001318878, intron 2 of 11) 15250 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr6-4815 chr6 81149286 81149496 + 9.66 0.000 Intergenic L1PBa|LINE|L1 603290 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr1-10999 chr1 218277884 218278094 + 9.66 0.000 Intergenic L1ME1|LINE|L1 -7304 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr7-4544 chr7 2255838 2256048 + 9.66 0.000 intron (NM_013321, intron 10 of 10) intron (NM_013321, intron 10 of 10) 1634 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr17-3298 chr17 55845388 55845598 + 9.66 0.000 Intergenic CpG 94388 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr9-2333 chr9 34139698 34139908 + 9.66 0.000 Intergenic L1MEi|LINE|L1 -13105 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr5-1801 chr5 62513270 62513480 + 9.66 0.000 intron (NM_016338, intron 19 of 29) SVA_D|Retroposon|SVA -65360 NR_073584 101180901 Hs.482269 NR_073584 ENSG00000086200 IPO11-LRRC70 - IPO11-LRRC70 readthrough ncRNA chr5-4693 chr5 39441188 39441398 + 9.66 0.000 Intergenic Intergenic -16060 NM_001244871 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB adaptor protein 2 protein-coding chr17-3211 chr17 3688032 3688242 + 9.66 0.000 intron (NM_175080, intron 7 of 10) intron (NM_175080, intron 7 of 10) 8018 NM_175080 5026 Hs.731607 NM_002561 ENSG00000083454 P2RX5 LRH-1|P2X5|P2X5R purinergic receptor P2X 5 protein-coding chr15-2946 chr15 48500705 48500915 + 9.66 0.000 intron (NM_000138, intron 17 of 65) intron (NM_000138, intron 17 of 65) 144978 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr3-10931 chr3 174016083 174016293 + 9.66 0.000 intron (NM_001365928, intron 4 of 6) LTR88c|LTR|Gypsy? -95392 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr15-3472 chr15 94824300 94824510 + 9.66 0.000 Intergenic LTR33|LTR|ERVL -30958 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr1-10724 chr1 195833600 195833810 + 9.66 0.000 Intergenic Intergenic 255010 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr19-4104 chr19 16591353 16591563 + 9.66 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) -19043 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr11-3664 chr11 120611001 120611211 + 9.66 0.000 intron (NM_001282470, intron 1 of 19) intron (NM_001282470, intron 1 of 19) 46670 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr18-3558 chr18 77312740 77312950 + 9.66 0.000 Intergenic MER57-int|LTR|ERV1 62997 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr4-4563 chr4 74229410 74229620 + 9.66 0.000 intron (NM_001144978, intron 6 of 7) intron (NM_001144978, intron 6 of 7) 71397 NR_147097 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr9-2556 chr9 132974956 132975166 + 9.66 0.000 5' UTR (NM_004188, exon 3 of 11) 5' UTR (NM_004188, exon 3 of 11) -3633 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr2-7858 chr2 50084395 50084605 + 9.66 0.000 intron (NM_001330093, intron 19 of 22) LTR12C|LTR|ERV1 -110297 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr21-823 chr21 38768581 38768791 + 9.66 0.000 intron (NR_027065, intron 1 of 6) intron (NR_027065, intron 1 of 6) 288 NR_027066 400866 Hs.278704 NM_001001789 ENSG00000223806 LINC00114 C21orf24|NCRNA00114 long intergenic non-protein coding RNA 114 ncRNA chr8-4619 chr8 132179759 132179969 + 9.66 0.000 intron (NM_001204824, intron 4 of 14) MIRb|SINE|MIR -74599 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr17-7143 chr17 77915789 77915999 + 9.66 0.000 Intergenic Intergenic -31807 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr12-6991 chr12 30442142 30442352 + 9.66 0.000 Intergenic Intergenic 234997 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr2-14310 chr2 217367233 217367443 + 9.66 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 84605 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr3-4089 chr3 102400288 102400498 + 9.66 0.000 Intergenic L4_C_Mam|LINE|RTE-X -34622 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr17-2750 chr17 79992599 79992809 + 9.66 0.000 intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) -41851 NM_001271846 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr2-14056 chr2 196399407 196399617 + 9.66 0.000 intron (NM_020760, intron 2 of 28) intron (NM_020760, intron 2 of 28) -37335 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr9-5532 chr9 108010257 108010467 + 9.66 0.000 Intergenic Intergenic -520593 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr14-2456 chr14 79457020 79457230 + 9.66 0.000 intron (NM_001105250, intron 1 of 6) intron (NM_001105250, intron 1 of 6) 177745 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr5-3057 chr5 31502279 31502489 + 9.66 0.000 intron (NM_013235, intron 10 of 34) ERV3-16A3_I-int|LTR|ERVL 29709 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr12-3686 chr12 132514874 132515084 + 9.66 0.000 intron (NM_001142641, intron 2 of 16) MER33|DNA|hAT-Charlie 24828 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr11-7652 chr11 64086124 64086334 + 9.66 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -17661 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr7-5581 chr7 47858660 47858870 + 9.66 0.000 exon (NM_138295, exon 27 of 57) exon (NM_138295, exon 27 of 57) 63474 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr18-2285 chr18 76870793 76871003 + 9.66 0.000 intron (NM_001306089, intron 4 of 30) L2|LINE|L2 46738 NM_007345 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr10-1059 chr10 100999616 100999826 + 9.66 0.000 promoter-TSS (NM_001318100) promoter-TSS (NM_001318100) -87 NM_001318100 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr7-5272 chr7 22268031 22268241 + 9.66 0.000 intron (NM_012294, intron 6 of 25) intron (NM_012294, intron 6 of 25) -73326 NM_001367602 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr5-5739 chr5 170110265 170110475 + 9.66 0.000 TTS (NM_144769) TTS (NM_144769) 4473 NM_144769 2299 Hs.87236 NM_012188 ENSG00000168269 FOXI1 FKH10|FKHL10|FREAC-6|FREAC6|HFH-3|HFH3 forkhead box I1 protein-coding chr8-4335 chr8 100055728 100055938 + 9.66 0.000 intron (NM_015668, intron 9 of 27) THE1B|LTR|ERVL-MaLR 49793 NM_001286693 26166 Hs.120021 NM_015668 ENSG00000132554 RGS22 CT145|PRTD-NY2 regulator of G protein signaling 22 protein-coding chr6-4823 chr6 81889781 81889991 + 9.66 0.000 intron (NR_149135, intron 3 of 3) intron (NR_149135, intron 3 of 3) 43594 NR_149136 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr7-3153 chr7 74459771 74459981 + 9.66 0.000 intron (NM_016328, intron 1 of 26) intron (NM_016328, intron 1 of 26) 5970 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr19-4180 chr19 42012482 42012692 + 9.66 0.000 intron (NM_002088, intron 14 of 18) MER58B|DNA|hAT-Charlie -18357 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr12-6337 chr12 56168967 56169177 + 9.66 0.000 intron (NM_001330288, intron 25 of 28) AluSx|SINE|Alu 10713 NM_021019 4637 Hs.632717 NM_021019 ENSG00000092841 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin light chain 6 protein-coding chr4-4119 chr4 6916948 6917158 + 9.66 0.000 intron (NM_020773, intron 1 of 13) intron (NM_020773, intron 1 of 13) 7227 NM_020773 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr16-6532 chr16 63487448 63487658 + 9.66 0.000 Intergenic LTR16|LTR|ERVL -1451115 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr3-9818 chr3 74314952 74315162 + 9.66 0.000 intron (NM_020872, intron 12 of 21) MER41B|LTR|ERV1 206083 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chrX-2603 chrX 106750512 106750722 + 9.66 0.000 intron (NM_194463, intron 1 of 6) Tigger15a|DNA|TcMar-Tigger 23916 NM_194463 79589 Hs.496542 NM_024539 ENSG00000133135 RNF128 GRAIL ring finger protein 128 protein-coding chrX-1744 chrX 43596211 43596421 + 9.66 0.000 Intergenic Intergenic -58591 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr1-6648 chr1 45573956 45574166 + 9.66 0.000 Intergenic MER61-int|LTR|ERV1 -9927 NM_001195193 4678 Hs.319334 NM_002482 ENSG00000132780 NASP FLB7527|HMDRA1|PRO1999 nuclear autoantigenic sperm protein protein-coding chr15-2440 chr15 74951842 74952052 + 9.66 0.000 Intergenic Intergenic 5487 NM_017793 54913 Hs.8562 NM_017793 ENSG00000178718 RPP25 - ribonuclease P and MRP subunit p25 protein-coding chr17-4890 chr17 69115308 69115518 + 9.66 0.000 exon (NM_080284, exon 12 of 39) exon (NM_080284, exon 12 of 39) -15781 NR_039750 100616316 NR_039750 ENSG00000283385 MIR4524A MIR4524|hsa-mir-4524a|mir-4524a microRNA 4524a ncRNA chr13-3087 chr13 47685180 47685390 + 9.66 0.000 Intergenic L1PREC2|LINE|L1 247337 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr6-3837 chr6 39972207 39972417 + 9.66 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -37850 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr1-12700 chr1 52825817 52826027 + 9.66 0.000 3' UTR (NM_024646, exon 14 of 14) 3' UTR (NM_024646, exon 14 of 14) -16838 NM_001307931 440590 Hs.658458 NM_001004339 ENSG00000203995 ZYG11A ZYG11 zyg-11 family member A, cell cycle regulator protein-coding chr14-3492 chr14 102699739 102699949 + 9.66 0.000 intron (NM_015156, intron 3 of 11) intron (NM_015156, intron 3 of 11) -77605 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr8-4808 chr8 13616352 13616562 + 9.66 0.000 Intergenic Intergenic -11837 NM_001348082 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr18-1467 chr18 57640394 57640604 + 9.66 0.000 intron (NM_001242804, intron 1 of 2) MLT1A0|LTR|ERVL-MaLR 10168 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr12-6301 chr12 51466745 51466955 + 9.66 0.000 intron (NM_001039960, intron 11 of 24) intron (NM_001039960, intron 11 of 24) 41733 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr7-5666 chr7 63204799 63205009 + 9.66 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 99152 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr12-7448 chr12 62865859 62866069 + 9.66 0.000 intron (NM_020700, intron 1 of 9) intron (NM_020700, intron 1 of 9) 69186 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr1-12330 chr1 1127653 1127863 + 9.66 0.000 Intergenic Intergenic -9259 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA chrX-1435 chrX 53686489 53686699 + 9.66 0.000 5' UTR (NM_031407, exon 1 of 84) 5' UTR (NM_031407, exon 1 of 84) 125 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr1-11143 chr1 235142793 235143003 + 9.66 0.000 intron (NR_144492, intron 4 of 8) AluSx|SINE|Alu -14061 NM_014765 9804 Hs.533192 NM_014765 ENSG00000173726 TOMM20 MAS20|MOM19|TOM20 translocase of outer mitochondrial membrane 20 protein-coding chr3-2521 chr3 16012793 16013003 + 9.66 0.000 Intergenic Intergenic 139127 NR_030289 693148 NR_030289 ENSG00000207815 MIR563 MIRN563|hsa-mir-563 microRNA 563 ncRNA chr20-2340 chr20 11807438 11807648 + 9.66 0.000 Intergenic L1ME1|LINE|L1 63172 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr11-8578 chr11 460303 460513 + 9.66 0.000 intron (NM_001329545, intron 2 of 10) intron (NM_001329545, intron 2 of 10) 10129 NM_001329544 81490 Hs.12851 NM_030783 ENSG00000174915 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding chr10-3976 chr10 120221991 120222201 + 9.66 0.000 Intergenic LTR41|LTR|ERVL 133127 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr1-8962 chr1 9407138 9407348 + 9.66 0.000 Intergenic Intergenic 21673 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr4-2883 chr4 76956661 76956871 + 9.66 0.000 intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 7014 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr11-6630 chr11 74619836 74620046 + 9.66 0.000 intron (NM_001363597, intron 6 of 11) intron (NM_001363597, intron 6 of 11) 27359 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr4-4357 chr4 39190805 39191015 + 9.66 0.000 intron (NM_001317924, intron 4 of 35) LTR86A1|LTR|ERVL 8381 NM_001317924 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr2-10887 chr2 66555578 66555788 + 9.66 0.000 intron (NM_002398, intron 9 of 12) intron (NM_002398, intron 9 of 12) -18347 NR_110156 100507073 Hs.667940 NR_110156 ENSG00000232046 LINC01798 - long intergenic non-protein coding RNA 1798 ncRNA chr16-6018 chr16 8899777 8899987 + 9.66 0.000 intron (NM_001286458, intron 22 of 31) intron (NM_001286458, intron 22 of 31) -30870 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr6-3197 chr6 131377416 131377626 + 9.66 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 127117 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr2-7918 chr2 58495175 58495385 + 9.66 0.000 Intergenic Intergenic -25473 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr7-4709 chr7 47563660 47563870 + 9.66 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 18346 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr3-6953 chr3 162002614 162002824 + 9.66 0.000 Intergenic L1PA17|LINE|L1 505911 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr16-4254 chr16 22816715 22816925 + 9.66 0.000 intron (NM_006043, intron 1 of 1) intron (NM_006043, intron 1 of 1) 2658 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr1-5590 chr1 6313818 6314028 + 9.66 0.000 intron (NM_181866, intron 6 of 8) HAL1|LINE|L1 45006 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr13-1304 chr13 81709068 81709278 + 9.66 0.000 Intergenic THE1D|LTR|ERVL-MaLR -482190 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr18-1512 chr18 3967097 3967307 + 9.66 0.000 intron (NR_102696, intron 1 of 4) intron (NR_102696, intron 1 of 4) 4849 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA chr10-3371 chr10 21517413 21517623 + 9.66 0.000 exon (NM_207371, exon 4 of 4) exon (NM_207371, exon 4 of 4) 8164 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr8-4264 chr8 93718619 93718829 + 9.66 0.000 non-coding (NR_104268, exon 6 of 9) non-coding (NR_104268, exon 6 of 9) 18174 NR_156452 137392 Hs.125038 NM_145269 ENSG00000188343 FAM92A FAM92A1|PAPA9 family with sequence similarity 92 member A protein-coding chr7-5124 chr7 4952347 4952557 + 9.66 0.000 intron (NR_072989, intron 1 of 8) intron (NR_072989, intron 1 of 8) 6735 NM_001270375 221938 Hs.558694 NM_198403 ENSG00000136297 MMD2 PAQR10 monocyte to macrophage differentiation associated 2 protein-coding chr4-3462 chr4 107196435 107196645 + 9.66 0.000 Intergenic Intergenic -160227 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr4-8287 chr4 142526050 142526260 + 9.66 0.000 intron (NM_003866, intron 2 of 26) intron (NM_003866, intron 2 of 26) 320380 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr7-2591 chr7 134552273 134552483 + 9.66 0.000 intron (NR_160302, intron 1 of 2) HERVS71-int|LTR|ERV1 3268 NR_160302 441282 Hs.729418 NM_001080538 ENSG00000227471 AKR1B15 AKR1B10L|AKR1B10L, AK1R1B7|AKR1R1B7 aldo-keto reductase family 1 member B15 protein-coding chr7-5105 chr7 3562425 3562635 + 9.66 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 261278 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr14-3833 chr14 74211547 74211757 + 9.66 0.000 Intergenic L1ME3|LINE|L1 -27797 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr22-2227 chr22 22873094 22873304 + 9.66 0.000 Intergenic Intergenic -13068 NR_049835 100847006 NR_049835 ENSG00000264824 MIR5571 - microRNA 5571 ncRNA chr1-8054 chr1 247390218 247390428 + 9.66 0.000 Intergenic Intergenic -25833 NM_001127461 114548 Hs.159483 NM_004895 ENSG00000162711 NLRP3 AGTAVPRL|AII|AVP|C1orf7|CIAS1|CLR1.1|DFNA34|FCAS|FCAS1|FCU|KEFH|MWS|NALP3|PYPAF1 NLR family pyrin domain containing 3 protein-coding chr9-4215 chr9 42388926 42389136 + 9.66 0.000 Intergenic Intergenic 180318 NR_126050 103908605 Hs.721139 NR_126050 LOC103908605 - uncharacterized LOC103908605 ncRNA chr6-3888 chr6 58324767 58324977 + 9.66 0.000 Intergenic Intergenic -363426 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr9-2425 chr9 136290813 136291023 + 9.66 0.000 exon (NM_001291516, exon 6 of 10) exon (NM_001291516, exon 6 of 10) 13176 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr2-10735 chr2 31440824 31441034 + 9.66 0.000 Intergenic Intergenic -26187 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr6-3734 chr6 5315934 5316144 + 9.66 0.000 intron (NM_006567, intron 1 of 6) intron (NM_006567, intron 1 of 6) 54526 NM_006567 10667 Hs.484547 NM_006567 ENSG00000145982 FARS2 COXPD14|FARS1|HSPC320|PheRS|SPG77|mtPheRS phenylalanyl-tRNA synthetase 2, mitochondrial protein-coding chr13-2120 chr13 91249141 91249351 + 9.66 0.000 Intergenic AluJo|SINE|Alu -37548 NR_047004 100874150 Hs.711947 NR_047004 LINC00379 - long intergenic non-protein coding RNA 379 ncRNA chr8-3791 chr8 26420808 26421018 + 9.66 0.000 Intergenic AluSx1|SINE|Alu 30500 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr15-4818 chr15 73288775 73288985 + 9.66 0.000 intron (NM_002499, intron 24 of 28) intron (NM_002499, intron 24 of 28) -11030 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr2-5440 chr2 120832232 120832442 + 9.66 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 40056 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr5-4468 chr5 7679999 7680209 + 9.66 0.000 intron (NM_020546, intron 4 of 24) intron (NM_020546, intron 4 of 24) 171029 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding chrX-952 chrX 74290632 74290842 + 9.66 0.000 intron (NR_028379, intron 1 of 6) intron (NR_028379, intron 1 of 6) 2837 NR_028379 100302692 Hs.349570 NR_028379 ENSG00000230590 FTX LINC00182|MIR374AHG|NCRNA00182 FTX transcript, XIST regulator ncRNA chr1-9637 chr1 46575250 46575460 + 9.66 0.000 intron (NM_198973, intron 5 of 11) intron (NM_198973, intron 5 of 11) -23698 NM_001322255 148930 Hs.350764 NM_182516 ENSG00000162456 KNCN Kino|L5 kinocilin protein-coding chr18-1959 chr18 37314131 37314341 + 9.66 0.000 intron (NM_001353741, intron 3 of 13) AluSx1|SINE|Alu 39776 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr15-4659 chr15 64635466 64635676 + 9.66 0.000 intron (NM_015042, intron 2 of 8) intron (NM_015042, intron 2 of 8) 67710 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr2-5451 chr2 122896825 122897035 + 9.66 0.000 Intergenic Intergenic 176551 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr11-2395 chr11 2884378 2884588 + 9.66 0.000 intron (NM_001362475, intron 2 of 3).2 CpG-3915 1282 NM_000076 1028 Hs.106070 NM_000076 ENSG00000129757 CDKN1C BWCR|BWS|KIP2|WBS|p57|p57Kip2 cyclin dependent kinase inhibitor 1C protein-coding chr11-6543 chr11 69907731 69907941 + 9.66 0.000 Intergenic L2a|LINE|L2 -88420 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr1-9482 chr1 36644783 36644993 + 9.66 0.000 Intergenic MIRb|SINE|MIR -161574 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr14-4392 chr14 29321824 29322034 + 9.66 0.000 Intergenic Intergenic -536142 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr5-8081 chr5 95441821 95442031 + 9.66 0.000 intron (NM_152548, intron 7 of 9) intron (NM_152548, intron 7 of 9) 50560 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr11-3275 chr11 77184166 77184376 + 9.66 0.000 intron (NM_001127180, intron 26 of 48) intron (NM_001127180, intron 26 of 48) 56025 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr10-8795 chr10 107153660 107153870 + 9.66 0.000 intron (NM_001206569, intron 1 of 25) intron (NM_001206569, intron 1 of 25) 10941 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr18-2577 chr18 10020466 10020676 + 9.66 0.000 Intergenic Intergenic 106555 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr15-1914 chr15 79812813 79813023 + 9.66 0.000 Intergenic L2b|LINE|L2 84079 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr19-1718 chr19 46814080 46814290 + 9.66 0.000 Intergenic L2a|LINE|L2 16519 NR_024258 100170220 Hs.541243 NR_024258 SNAR-E - small NF90 (ILF3) associated RNA E snRNA chr12-8257 chr12 124783053 124783263 + 9.66 0.000 intron (NM_001367986, intron 11 of 12) intron (NM_001367986, intron 11 of 12) 56513 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr6-4428 chr6 33719820 33720030 + 9.66 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -8225 NM_032340 84300 Hs.732448 NM_032340 ENSG00000137288 UQCC2 C6orf125|C6orf126|Cbp6|M19|MC3DN7|MNF1|bA6B20.2 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding chr16-3167 chr16 81494019 81494229 + 9.66 0.000 intron (NM_198390, intron 1 of 20) intron (NM_198390, intron 1 of 20) -1230 NM_030629 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding chr2-3536 chr2 4674797 4675007 + 9.66 0.000 Intergenic MER52A|LTR|ERV1 -18680 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr8-3562 chr8 127993885 127994095 + 9.66 0.000 intron (NR_003367, intron 5 of 8) MIRc|SINE|MIR -14908 NR_031611 100302170 NR_031611 ENSG00000283200 MIR1206 MIRN1206|hsa-mir-1206 microRNA 1206 ncRNA chr17-5398 chr17 33317368 33317578 + 9.66 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -24485 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr16-4894 chr16 88916442 88916652 + 9.66 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) -23490 NM_001290330 100129697 Hs.689377 NM_001290330 LOC100129697 - uncharacterized LOC100129697 protein-coding chr8-1913 chr8 37179931 37180141 + 9.66 0.000 Intergenic Intergenic 313877 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr4-7138 chr4 37585804 37586014 + 9.66 0.000 intron (NM_018302, intron 1 of 2) intron (NM_018302, intron 1 of 2) 1676 NM_018302 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr11-3117 chr11 35030697 35030907 + 9.66 0.000 Intergenic Intergenic 88965 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr12-7383 chr12 57116268 57116478 + 9.66 0.000 Intergenic Intergenic -5011 NR_033659 6778 Hs.524518 NM_003153 ENSG00000166888 STAT6 D12S1644|IL-4-STAT|STAT6B|STAT6C signal transducer and activator of transcription 6 protein-coding chr2-11778 chr2 13655348 13655558 + 9.66 0.000 Intergenic Intergenic -648440 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr1-6721 chr1 61852119 61852329 + 9.66 0.000 intron (NM_001350145, intron 17 of 43) intron (NM_001350145, intron 17 of 43) 6149 NR_162146 113219465 NR_162146 MIR12132 - microRNA 12132 ncRNA chr8-4076 chr8 66512395 66512605 + 9.66 0.000 intron (NM_152765, intron 4 of 5) intron (NM_152765, intron 4 of 5) 18934 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 VXN C8orf46 vexin protein-coding chr2-1966 chr2 9287685 9287895 + 9.66 0.000 intron (NM_003887, intron 2 of 27) intron (NM_003887, intron 2 of 27) 80978 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr21-1877 chr21 43590219 43590429 + 9.66 0.000 intron (NM_007031, intron 8 of 8) L1ME1|LINE|L1 19665 NR_106718 102464825 NR_106718 ENSG00000278433 MIR6070 hsa-mir-6070 microRNA 6070 ncRNA chr6-5597 chr6 37382955 37383165 + 9.66 0.000 intron (NR_046399, intron 7 of 7) intron (NR_046399, intron 7 of 7) 29077 NM_183078 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr1-8325 chr1 52579624 52579834 + 9.66 0.000 Intergenic L2c|LINE|L2 -22642 NM_015696 2882 Hs.43728 NM_015696 ENSG00000116157 GPX7 CL683|GPX6|GPx-7|GSHPx-7|NPGPx glutathione peroxidase 7 protein-coding chr2-8109 chr2 78014438 78014648 + 9.66 0.000 intron (NR_110288, intron 1 of 3) Tigger1|DNA|TcMar-Tigger -59517 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA chr5-7244 chr5 10778677 10778887 + 9.66 0.000 Intergenic Intergenic -17548 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr5-2327 chr5 62094010 62094220 + 9.66 0.000 Intergenic Intergenic -212047 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr17-2443 chr17 18144169 18144379 + 9.66 0.000 intron (NM_016239, intron 27 of 64) intron (NM_016239, intron 27 of 64) 35518 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr18-1180 chr18 23539049 23539259 + 9.66 0.000 intron (NM_000271, intron 19 of 24) intron (NM_000271, intron 19 of 24) 35643 NM_013326 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr11-5488 chr11 79017792 79018002 + 9.66 0.000 intron (NM_001098816, intron 6 of 33) MER45A|DNA|hAT-Tip100 384212 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr7-3196 chr7 121485662 121485872 + 9.66 0.000 Intergenic Intergenic -89399 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr11-6560 chr11 71198763 71198973 + 9.66 0.000 intron (NM_012309, intron 1 of 24) intron (NM_012309, intron 1 of 24) 25928 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr11-6788 chr11 88652745 88652955 + 9.66 0.000 intron (NM_001143831, intron 3 of 8) L2c|LINE|L2 148274 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr2-4762 chr2 23486821 23487031 + 9.66 0.000 intron (NM_052920, intron 2 of 13) MIRb|SINE|MIR 101747 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr5-6779 chr5 89661045 89661255 + 9.66 0.000 Intergenic MSTB1-int|LTR|ERVL-MaLR 355570 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr18-1795 chr18 12188120 12188330 + 9.66 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -12554 NR_049896 497259 Hs.451609 NR_049896 C18orf61 - uncharacterized LOC497259 ncRNA chr8-4205 chr8 85176964 85177174 + 9.66 0.000 promoter-TSS (NM_001951) promoter-TSS (NM_001951) -28 NR_134311 102723322 Hs.535913 NR_134311 ENSG00000260493 LOC102723322 - uncharacterized LOC102723322 ncRNA chr8-1286 chr8 38651057 38651267 + 9.66 0.000 Intergenic CpG -49905 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr12-7709 chr12 90985234 90985444 + 9.66 0.000 intron (NM_004950, intron 2 of 6) HERV9-int|LTR|ERV1 19633 NM_004950 1833 Hs.435680 NM_004950 ENSG00000083782 EPYC DSPG3|PGLB|Pg-Lb|SLRR3B epiphycan protein-coding chr17-5155 chr17 8741637 8741847 + 9.66 0.000 intron (NM_001158261, intron 3 of 5) intron (NM_001158261, intron 3 of 5) 3094 NM_144681 146849 Hs.121438 NM_144681 ENSG00000161973 CCDC42 CCDC42A coiled-coil domain containing 42 protein-coding chr12-5095 chr12 94756749 94756959 + 9.66 0.000 Intergenic L2c|LINE|L2 -77544 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr2-6121 chr2 218868767 218868977 + 9.66 0.000 intron (NM_006522, intron 1 of 3) L2c|LINE|L2 9067 NM_006522 7475 Hs.29764 NM_006522 ENSG00000115596 WNT6 - Wnt family member 6 protein-coding chr5-5268 chr5 121872749 121872959 + 9.66 0.000 Intergenic Intergenic 20972 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr3-6985 chr3 168708406 168708616 + 9.66 0.000 intron (NR_021485, intron 5 of 15) intron (NR_021485, intron 5 of 15) 156657 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr12-2679 chr12 59596604 59596814 + 9.66 0.000 intron (NM_001270623, intron 1 of 5) CpG 680 NM_001270622 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr8-4723 chr8 141522170 141522380 + 9.66 0.000 Intergenic MIRb|SINE|MIR -15045 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr5-4995 chr5 81247527 81247737 + 9.66 0.000 intron (NR_034122, intron 2 of 3) intron (NR_034122, intron 2 of 3) 14310 NM_001099735 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr4-6663 chr4 2361628 2361838 + 9.66 0.000 intron (NM_020972, intron 1 of 12) intron (NM_020972, intron 1 of 12) 3081 NM_001172660 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr9-5142 chr9 37653079 37653289 + 9.66 0.000 intron (NM_014907, intron 1 of 15) MIRb|SINE|MIR 2230 NM_014907 22844 Hs.163990 NM_014907 ENSG00000070601 FRMPD1 FRMD2 FERM and PDZ domain containing 1 protein-coding chr16-6927 chr16 85344845 85345055 + 9.66 0.000 Intergenic Intergenic -38625 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr9-5892 chr9 132324384 132324594 + 9.66 0.000 intron (NM_001351527, intron 10 of 25) L2b|LINE|L2 30367 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr14-2203 chr14 101116127 101116337 + 9.66 0.000 Intergenic Intergenic -4624 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr10-8041 chr10 63758169 63758379 + 9.66 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -236384 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr11-5764 chr11 3826637 3826847 + 9.66 0.000 TTS (NM_001256238) TTS (NM_001256238) 14217 NM_001665 391 Hs.501728 NM_001665 ENSG00000177105 RHOG ARHG ras homolog family member G protein-coding chr18-1624 chr18 49137858 49138068 + 9.66 0.000 intron (NM_001353210, intron 14 of 16) intron (NM_001353210, intron 14 of 16) -88195 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr2-5122 chr2 20900711 20900921 + 9.66 0.000 Intergenic Intergenic -77686 NM_001282719 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr4-6522 chr4 167165574 167165784 + 9.66 0.000 intron (NM_001204352, intron 2 of 11) intron (NM_001204352, intron 2 of 11) 68747 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr1-11727 chr1 11359642 11359852 + 9.66 0.000 Intergenic L2b|LINE|L2 86549 NM_013319 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr10-4371 chr10 35789943 35790153 + 9.66 0.000 intron (NR_110138, intron 1 of 2) MSTB|LTR|ERVL-MaLR 11746 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr14-2156 chr14 89372365 89372575 + 9.66 0.000 intron (NM_001085471, intron 2 of 6) intron (NM_001085471, intron 2 of 6) 44763 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr9-6093 chr9 137564152 137564362 + 9.66 0.000 intron (NM_001346372, intron 8 of 8) L2|LINE|L2 12378 NM_032477 64975 Hs.44017 NM_032477 ENSG00000182154 MRPL41 BMRP|MRP-L27|MRPL27|PIG3|RPML27 mitochondrial ribosomal protein L41 protein-coding chr13-1883 chr13 33164700 33164910 + 9.66 0.000 intron (NM_178007, intron 3 of 13) intron (NM_178007, intron 3 of 13) 21286 NM_001243466 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr6-7855 chr6 105573137 105573347 + 9.66 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -170160 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr14-2824 chr14 23437690 23437900 + 9.66 0.000 Intergenic Intergenic -2135 NM_000257 4625 Hs.719946 NM_000257 ENSG00000092054 MYH7 CMD1S|CMH1|MPD1|MYHCB|SPMD|SPMM myosin heavy chain 7 protein-coding chr13-3928 chr13 58949671 58949881 + 9.66 0.000 Intergenic MER11B|LTR|ERVK -716659 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr3-9577 chr3 54575334 54575544 + 9.66 0.000 intron (NM_018398, intron 8 of 37) intron (NM_018398, intron 8 of 37) 64418 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr7-5300 chr7 24828925 24829135 + 9.66 0.000 intron (NR_104111, intron 15 of 21) intron (NR_104111, intron 15 of 21) 63591 NM_145320 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr4-4124 chr4 7163537 7163747 + 9.66 0.000 Intergenic L1M2|LINE|L1 -28896 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr3-3127 chr3 151864732 151864942 + 9.66 0.000 intron (NR_110203, intron 1 of 2) intron (NR_110203, intron 1 of 2) -8806 NM_033050 56670 Hs.133181 NM_033050 ENSG00000198829 SUCNR1 GPR91 succinate receptor 1 protein-coding chr22-3827 chr22 31322594 31322804 + 9.66 0.000 Intergenic Intergenic -12650 NR_110542 101929760 Hs.661718 NR_110542 ENSG00000228839 PIK3IP1-AS1 - PIK3IP1 antisense RNA 1 (head to head) ncRNA chr9-7886 chr9 87890785 87890995 + 9.66 0.000 intron (NR_149022, intron 3 of 3) intron (NR_149022, intron 3 of 3) 8013 NM_178828 286234 Hs.130672 NM_178828 ENSG00000177992 SPATA31E1 C9orf79|FAM75E1 SPATA31 subfamily E member 1 protein-coding chr4-2992 chr4 120692983 120693193 + 9.66 0.000 3' UTR (NM_018699, exon 16 of 16) 3' UTR (NM_018699, exon 16 of 16) 229778 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr5-9199 chr5 180027661 180027871 + 9.66 0.000 intron (NM_001280801, intron 2 of 7) intron (NM_001280801, intron 2 of 7) -12369 NR_029885 442908 NR_029885 ENSG00000198995 MIR340 MIRN340|hsa-mir-340|mir-340 microRNA 340 ncRNA chr1-5129 chr1 154556425 154556635 + 9.66 0.000 intron (NM_017582, intron 1 of 12) intron (NM_017582, intron 1 of 12) 2132 NM_017582 55585 Hs.607928 NM_017582 ENSG00000160714 UBE2Q1 GTAP|NICE-5|NICE5|PRO3094|UBE2Q ubiquitin conjugating enzyme E2 Q1 protein-coding chr15-2546 chr15 46657145 46657355 + 9.66 0.000 Intergenic Intergenic -526839 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr12-1739 chr12 53346112 53346322 + 9.66 0.000 Intergenic Intergenic -1424 NM_001300837 121340 Hs.209402 NM_152860 ENSG00000170374 SP7 OI11|OI12|OSX|osterix Sp7 transcription factor protein-coding chr3-2496 chr3 159883439 159883649 + 9.66 0.000 intron (NM_001197113, intron 6 of 10) intron (NM_001197113, intron 6 of 10) 43683 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr9-4799 chr9 135682064 135682274 + 9.66 0.000 Intergenic Intergenic 17312 NM_001012415 402381 Hs.120464 NM_001012415 ENSG00000165643 SOHLH1 C9orf157|NOHLH|ODG5|SPATA27|SPGF32|TEB2|bA100C15.3|bHLHe80 spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein-coding chr10-4889 chr10 18650095 18650305 + 9.66 0.000 intron (NM_001351116, intron 2 of 11) intron (NM_001351116, intron 2 of 11) 1387 NM_182543 221078 Hs.396175 NM_182543 ENSG00000241058 NSUN6 4933414E04Rik|ARL5B-AS1|NOPD1 NOP2/Sun RNA methyltransferase 6 protein-coding chr18-1623 chr18 48427494 48427704 + 9.66 0.000 Intergenic THE1D|LTR|ERVL-MaLR -15014 NM_001371287 chr12-4484 chr12 19036638 19036848 + 9.66 0.000 Intergenic Intergenic -92990 NM_001143821 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr5-6011 chr5 149773216 149773426 + 9.66 0.000 intron (NM_001172699, intron 1 of 10) intron (NM_001172699, intron 1 of 10) 1381 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr1-3329 chr1 23194624 23194834 + 9.66 0.000 promoter-TSS (NM_000864) promoter-TSS (NM_000864) 0 NM_000864 3352 Hs.121482 NM_000864 ENSG00000179546 HTR1D 5-HT1D|HT1DA|HTR1DA|HTRL|RDC4 5-hydroxytryptamine receptor 1D protein-coding chr7-4278 chr7 6587002 6587212 + 9.66 0.000 intron (NM_001371296, intron 7 of 7) AluJb|SINE|Alu -2914 NM_024067 79034 Hs.487511 NM_024067 ENSG00000146576 C7orf26 - chromosome 7 open reading frame 26 protein-coding chr6-5614 chr6 44661705 44661915 + 9.66 0.000 Intergenic L1MC5|LINE|L1 -109929 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr17-3362 chr17 79257329 79257539 + 9.66 0.000 intron (NM_001082575, intron 3 of 14) intron (NM_001082575, intron 3 of 14) 182497 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr6-7932 chr6 110411043 110411253 + 9.66 0.000 intron (NM_001368171, intron 1 of 3) HAL1|LINE|L1 4427 NM_004032 8528 Hs.591348 NM_003649 ENSG00000203797 DDO DASOX|DDO-1|DDO-2 D-aspartate oxidase protein-coding chr6-2875 chr6 6936354 6936564 + 9.66 0.000 Intergenic Intergenic -171284 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr1-7949 chr1 179563933 179564143 + 9.66 0.000 intron (NM_001297575, intron 2 of 6) LTR16B1|LTR|ERVL 11910 NM_001297575 7827 Hs.412710 NM_014625 ENSG00000116218 NPHS2 PDCN|SRN1 NPHS2 stomatin family member, podocin protein-coding chr7-3379 chr7 110791172 110791382 + 9.66 0.000 intron (NM_001350963, intron 5 of 5) intron (NM_001350963, intron 5 of 5) -299729 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr12-4221 chr12 105358812 105359022 + 9.66 0.000 intron (NM_001145199, intron 2 of 5) intron (NM_001145199, intron 2 of 5) 28226 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr8-4097 chr8 69071060 69071270 + 9.66 0.000 intron (NR_039986, intron 1 of 4) intron (NR_039986, intron 1 of 4) 33025 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr21-391 chr21 34733513 34733723 + 9.66 0.000 intron (NR_024351, intron 3 of 5) intron (NR_024351, intron 3 of 5) 3564 NR_024351 54064 Hs.436868 NR_024351 ENSG00000230978 LINC00160 C21orf52|NCRNA00160 long intergenic non-protein coding RNA 160 ncRNA chr18-1338 chr18 79257503 79257713 + 9.66 0.000 intron (NM_198531, intron 12 of 29) intron (NM_198531, intron 12 of 29) -138322 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chrX-882 chrX 9148966 9149176 + 9.66 0.000 Intergenic Intergenic -114944 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding chr1-6072 chr1 96488275 96488485 + 9.66 0.000 Intergenic Intergenic -114255 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr3-7923 chr3 144746565 144746775 + 9.66 0.000 Intergenic LTR40a|LTR|ERVL 773589 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr3-3765 chr3 9987103 9987313 + 9.66 0.000 non-coding (NR_103821, exon 1 of 3) non-coding (NR_103821, exon 1 of 3) 315 NR_103821 442075 Hs.690469 NM_001013730 EMC3-AS1 - EMC3 antisense RNA 1 ncRNA chrX-2426 chrX 77676897 77677107 + 9.66 0.000 intron (NM_000489, intron 9 of 34) AluSx|SINE|Alu 109214 NM_000489 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr16-4611 chr16 69348314 69348524 + 9.66 0.000 intron (NM_144676, intron 2 of 3) intron (NM_144676, intron 2 of 3) 3367 NM_144676 146456 Hs.729118 NM_144676 ENSG00000157315 TMED6 PRO34237|SPLL9146|p24g5 transmembrane p24 trafficking protein 6 protein-coding chr3-2838 chr3 24047962 24048172 + 9.66 0.000 Intergenic L2|LINE|L2 55180 NR_026834 152024 Hs.385606 NR_026834 ENSG00000224074 LINC00691 - long intergenic non-protein coding RNA 691 ncRNA chr10-7295 chr10 131707790 131708000 + 9.66 0.000 Intergenic Intergenic 82304 NR_038365 399827 Hs.523353 NM_001001677 ENSG00000189275 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA chr13-2566 chr13 66929529 66929739 + 9.66 0.000 intron (NM_001318372, intron 2 of 4) intron (NM_001318372, intron 2 of 4) -47755 NR_046636 100874086 Hs.577908 NR_046636 ENSG00000225263 PCDH9-AS3 - PCDH9 antisense RNA 3 ncRNA chr5-2326 chr5 61651124 61651334 + 9.66 0.000 intron (NR_126524, intron 2 of 3) intron (NR_126524, intron 2 of 3) 13448 NR_126525 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr15-1222 chr15 63909189 63909399 + 9.66 0.000 intron (NM_014326, intron 11 of 11) intron (NM_014326, intron 11 of 11) -18980 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr8-5199 chr8 107958508 107958718 + 9.66 0.000 intron (NM_178565, intron 4 of 5) L1PA11|LINE|L1 123326 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr5-5645 chr5 157132014 157132224 + 9.66 0.000 Intergenic Intergenic 10656 NM_001100816 9443 Hs.279902 NM_004270 ENSG00000155868 MED7 ARC34|CRSP33|CRSP9 mediator complex subunit 7 protein-coding chr7-2956 chr7 153468962 153469172 + 9.66 0.000 Intergenic AluY|SINE|Alu -56833 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr1-6789 chr1 85149604 85149814 + 9.66 0.000 Intergenic Intergenic 15915 NR_039619 100616481 NR_039619 ENSG00000266110 MIR4423 mir-4423 microRNA 4423 ncRNA chr16-4904 chr16 89122268 89122478 + 9.66 0.000 intron (NR_104293, intron 7 of 10) intron (NR_104293, intron 7 of 10) -14175 NR_045667 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr2-8515 chr2 129468187 129468397 + 9.66 0.000 Intergenic AluJb|SINE|Alu -194401 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr11-5797 chr11 5983511 5983721 + 9.54 0.000 Intergenic Intergenic 3369 NM_001005173 338751 Hs.553703 NM_001005173 ENSG00000183313 OR52L1 OR11-50 olfactory receptor family 52 subfamily L member 1 protein-coding chr15-3637 chr15 79417317 79417527 + 9.54 0.000 Intergenic Intergenic -15094 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr3-2527 chr3 36908410 36908620 + 9.54 0.000 intron (NM_001329998, intron 1 of 23) intron (NM_001329998, intron 1 of 23) 36539 NM_001329998 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding chr16-3041 chr16 53257371 53257581 + 9.54 0.000 intron (NM_001352157, intron 18 of 37) L2|LINE|L2 49025 NM_001352158 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr5-4548 chr5 18186160 18186370 + 9.54 0.000 Intergenic L1MCc|LINE|L1 378991 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr3-7486 chr3 148606894 148607104 + 9.54 0.000 Intergenic LTR33A_|LTR|ERVL -90872 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr17-5386 chr17 32079964 32080174 + 9.54 0.000 Intergenic Intergenic 39733 NR_033412 6458 Hs.672460 NR_033412 SH3GL1P1 CNSA-P1|SH3GLP1 SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 1 pseudo chr1-9433 chr1 33570577 33570787 + 9.54 0.000 intron (NM_052896, intron 52 of 69) LTR16A|LTR|ERVL 98037 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr6-3105 chr6 96798775 96798985 + 9.54 0.000 exon (NM_001143957, exon 3 of 3) exon (NM_001143957, exon 3 of 3) 38597 NM_001143957 81491 Hs.221364 NM_030784 ENSG00000112218 GPR63 PSP24(beta)|PSP24B G protein-coupled receptor 63 protein-coding chr15-1805 chr15 98123806 98124016 + 9.54 0.000 Intergenic MER99|DNA|hAT? -35158 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chr11-5017 chr11 77198000 77198210 + 9.54 0.000 intron (NM_001127180, intron 33 of 48) intron (NM_001127180, intron 33 of 48) 69859 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr19-6433 chr19 15559233 15559443 + 9.54 0.000 Intergenic Intergenic 50813 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr13-1153 chr13 33204618 33204828 + 9.54 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) 1301 NM_052851 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr2-6909 chr2 102295670 102295880 + 9.54 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -15727 NM_001282408 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr20-2371 chr20 17065414 17065624 + 9.54 0.000 Intergenic Intergenic -160588 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr11-8059 chr11 27444325 27444535 + 9.54 0.000 intron (NM_018490, intron 1 of 17) intron (NM_018490, intron 1 of 17) -27301 NR_131169 105376671 Hs.568999 NR_131169 ENSG00000254862 LOC105376671 lnc-BBOX1-1 uncharacterized LOC105376671 ncRNA chr5-8792 chr5 149332861 149333071 + 9.54 0.000 intron (NM_001146337, intron 17 of 17) MIRb|SINE|MIR -12533 NM_152407 134266 Hs.511816 NM_152407 ENSG00000164284 GRPEL2 Mt-GrpE#2 GrpE like 2, mitochondrial protein-coding chr11-4457 chr11 101651283 101651493 + 9.54 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 -67381 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr2-13615 chr2 159053233 159053443 + 9.54 0.000 intron (NM_001350065, intron 3 of 27) intron (NM_001350065, intron 3 of 27) 84698 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr14-3883 chr14 91946613 91946823 + 9.54 0.000 intron (NM_006329, intron 1 of 10) intron (NM_006329, intron 1 of 10) 984 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr3-6986 chr3 168861561 168861771 + 9.54 0.000 Intergenic L2a|LINE|L2 -40279 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr8-1497 chr8 51900628 51900838 + 9.54 0.000 Intergenic Intergenic -1547 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr5-2217 chr5 177217525 177217735 + 9.54 0.000 intron (NM_172349, intron 6 of 23) L1MB1|LINE|L1 83401 NM_001365684 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chrX-1928 chrX 153778395 153778605 + 9.54 0.000 intron (NM_001163257, intron 35 of 36) intron (NM_001163257, intron 35 of 36) -2501 NM_001170761 26576 Hs.104865 NM_014370 ENSG00000184343 SRPK3 MSSK-1|MSSK1|STK23 SRSF protein kinase 3 protein-coding chr18-3544 chr18 76557222 76557432 + 9.54 0.000 intron (NR_015417, intron 2 of 2) L1MEh|LINE|L1 28672 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chr11-2753 chr11 58770989 58771199 + 9.54 0.000 Intergenic HERV1_I-int|LTR|ERV1 -39120 NM_005838 10249 Hs.145384 NM_005838 ENSG00000149124 GLYAT ACGNAT|CAT|GAT glycine-N-acyltransferase protein-coding chr19-3616 chr19 55615326 55615536 + 9.54 0.000 exon (NM_001195605, exon 1 of 1) exon (NM_001195605, exon 1 of 1) 1838 NM_001195605 100507290 Hs.729114 NM_001195605 ENSG00000261221 ZNF865 - zinc finger protein 865 protein-coding chr1-10875 chr1 205943137 205943347 + 9.54 0.000 intron (NM_052934, intron 1 of 20) intron (NM_052934, intron 1 of 20) 214 NM_052934 115019 Hs.164073 NM_052934 ENSG00000174502 SLC26A9 - solute carrier family 26 member 9 protein-coding chr13-4364 chr13 106385738 106385948 + 9.54 0.000 Intergenic Intergenic 9279 NR_163477 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr11-6150 chr11 42667981 42668191 + 9.54 0.000 Intergenic MIR3|SINE|MIR -414396 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr8-3953 chr8 47845542 47845752 + 9.54 0.000 intron (NM_001081640, intron 54 of 84) L1PA16|LINE|L1 -107483 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr3-5918 chr3 42440196 42440406 + 9.54 0.000 Intergenic Intergenic -29691 NM_001304386 131375 Hs.234895 NM_144634 ENSG00000157093 LYZL4 LYC4|LYZA lysozyme like 4 protein-coding chr2-3913 chr2 47756185 47756395 + 9.54 0.000 Intergenic Intergenic -26792 NM_001281492 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr1-8631 chr1 202066413 202066623 + 9.54 0.000 Intergenic AluJb|SINE|Alu 55931 NM_001114309 1999 Hs.603657 NM_004433 ENSG00000163435 ELF3 EPR-1|ERT|ESE-1|ESX E74 like ETS transcription factor 3 protein-coding chr3-3203 chr3 190701137 190701347 + 9.54 0.000 Intergenic Intergenic 161452 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr2-11368 chr2 209243882 209244092 + 9.54 0.000 Intergenic L1PA7|LINE|L1 -180060 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr1-14871 chr1 80513669 80513879 + 9.54 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -21981 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr22-1277 chr22 33361696 33361906 + 9.54 0.000 intron (NM_133642, intron 9 of 14) L2c|LINE|L2 74868 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr17-4532 chr17 76979315 76979525 + 9.54 0.000 Intergenic LTR16A|LTR|ERVL -10221 NR_136417 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chrX-983 chrX 153649580 153649790 + 9.54 0.000 exon (NM_001395, exon 3 of 4) exon (NM_001395, exon 3 of 4) 2482 NM_001318503 1852 Hs.144879 NM_001395 ENSG00000130829 DUSP9 MKP-4|MKP4 dual specificity phosphatase 9 protein-coding chr12-6723 chr12 5517069 5517279 + 9.54 0.000 Intergenic MIRb|SINE|MIR 23042 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr6-4083 chr6 142092766 142092976 + 9.54 0.000 intron (NM_001324308, intron 1 of 2) L1MC1|LINE|L1 -4072 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr16-3047 chr16 55116507 55116717 + 9.54 0.000 Intergenic Intergenic 185413 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr13-2435 chr13 46822670 46822880 + 9.54 0.000 Intergenic Intergenic -25614 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr20-3793 chr20 22445909 22446119 + 9.54 0.000 Intergenic Intergenic -25371 NR_027090 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr11-9720 chr11 68282424 68282634 + 9.54 0.000 Intergenic Intergenic -10556 NM_001300913 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr1-7180 chr1 209822950 209823160 + 9.54 0.000 Intergenic L2c|LINE|L2 -4917 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 UTP25 C1orf107|DEF|DIEXF|DJ434O14.5 UTP25 small subunit processor component protein-coding chr17-4852 chr17 62334411 62334621 + 9.54 0.000 Intergenic L2a|LINE|L2 -35702 NM_001144933 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding chr2-12368 chr2 51937904 51938114 + 9.54 0.000 intron (NR_135237, intron 7 of 10) intron (NR_135237, intron 7 of 10) -432639 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chrX-3057 chrX 105625788 105625998 + 9.54 0.000 intron (NM_017416, intron 6 of 10) intron (NM_017416, intron 6 of 10) -196646 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr2-6043 chr2 119657327 119657537 + 9.54 0.000 TTS (NM_001271049) TTS (NM_001271049) -21735 NM_001105198 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr5-3348 chr5 136462476 136462686 + 9.54 0.000 Intergenic Intergenic -97105 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr16-2762 chr16 4193112 4193322 + 9.54 0.000 intron (NM_001098814, intron 5 of 5) AluJb|SINE|Alu 48863 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr5-5664 chr5 159146657 159146867 + 9.54 0.000 Intergenic Intergenic 46279 NR_109890 101927740 Hs.738721 NR_109890 ENSG00000245812 LINC02202 - long intergenic non-protein coding RNA 2202 ncRNA chr2-5764 chr2 221951329 221951539 + 9.54 0.000 Intergenic MLT2A1|LTR|ERVL -346713 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr3-1361 chr3 196335077 196335287 + 9.54 0.000 intron (NM_138461, intron 1 of 4) intron (NM_138461, intron 1 of 4) 3206 NM_001204897 116211 Hs.733264 NM_138461 ENSG00000145107 TM4SF19 OCTM4 transmembrane 4 L six family member 19 protein-coding chr17-4889 chr17 68884973 68885183 + 9.54 0.000 intron (NM_001288985, intron 27 of 39) intron (NM_001288985, intron 27 of 39) 70314 NM_007168 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr3-7025 chr3 171861327 171861537 + 9.54 0.000 Intergenic MamTip2|DNA|hAT-Tip100 18083 NM_001164436 389177 Hs.642307 NM_001164436 ENSG00000186329 TMEM212 - transmembrane protein 212 protein-coding chr3-9732 chr3 67767498 67767708 + 9.54 0.000 intron (NR_109992, intron 3 of 6) intron (NR_109992, intron 3 of 6) 112906 NR_109993 101927111 Hs.518057 NR_109992 ENSG00000241316 SUCLG2-AS1 - SUCLG2 antisense RNA 1 (head to head) ncRNA chr7-3028 chr7 90178943 90179153 + 9.54 0.000 intron (NR_110029, intron 2 of 2) intron (NR_110029, intron 2 of 2) 24579 NM_012449 26872 Hs.61635 NM_012449 ENSG00000164647 STEAP1 PRSS24|STEAP STEAP family member 1 protein-coding chr11-6765 chr11 85590915 85591125 + 9.54 0.000 intron (NM_001142699, intron 3 of 27) intron (NM_001142699, intron 3 of 27) 36250 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr11-7199 chr11 132075685 132075895 + 9.54 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 164972 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr6-3937 chr6 84906495 84906705 + 9.54 0.000 Intergenic Intergenic -142002 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box transcription factor 18 protein-coding chr7-6326 chr7 143229130 143229340 + 9.54 0.000 intron (NM_001130026, intron 8 of 10) intron (NM_001130026, intron 8 of 10) 7198 NM_176882 259286 Hs.352241 NM_176882 ENSG00000221937 TAS2R40 GPR60|T2R40|T2R58 taste 2 receptor member 40 protein-coding chrX-1122 chrX 23807215 23807425 + 9.54 0.000 Intergenic Intergenic 24162 NM_002970 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr2-12336 chr2 48306892 48307102 + 9.54 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -7685 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr2-6575 chr2 225148844 225149054 + 9.54 0.000 Intergenic L2a|LINE|L2 -106481 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr7-3094 chr7 5546636 5546846 + 9.54 0.000 Intergenic Intergenic -16140 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr10-8571 chr10 95419850 95420060 + 9.54 0.000 intron (NM_001034955, intron 6 of 30) intron (NM_001034955, intron 6 of 30) 21225 NM_001290297 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr18-1432 chr18 13614495 13614705 + 9.54 0.000 intron (NM_001003674, intron 1 of 3) intron (NM_001003674, intron 1 of 3) 2836 NM_001276249 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr9-7138 chr9 132442231 132442441 + 9.54 0.000 intron (NM_001282957, intron 1 of 5) AluJb|SINE|Alu 32125 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr16-5747 chr16 85956203 85956413 + 9.54 0.000 Intergenic L2b|LINE|L2 37961 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chrX-5349 chrX 148853813 148854023 + 9.54 0.000 intron (NM_001170628, intron 4 of 17) intron (NM_001170628, intron 4 of 17) 134827 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr6-4949 chr6 101986779 101986989 + 9.54 0.000 intron (NM_001166247, intron 13 of 16) AluJr4|SINE|Alu 587899 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr12-2870 chr12 12737270 12737480 + 9.54 0.000 intron (NM_001130415, intron 1 of 1) intron (NM_001130415, intron 1 of 1) 11458 NM_001130415 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chr6-7564 chr6 71989216 71989426 + 9.54 0.000 intron (NM_001350411, intron 2 of 3) intron (NM_001350411, intron 2 of 3) 102618 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr22-4320 chr22 50556359 50556569 + 9.54 0.000 intron (NM_001123225, intron 1 of 2) MIRb|SINE|MIR 6455 NM_001123225 644186 Hs.535660 NM_001123225 ENSG00000217442 SYCE3 C22orf41|THEG2 synaptonemal complex central element protein 3 protein-coding chr2-3136 chr2 177254989 177255199 + 9.54 0.000 TTS (NR_036075) TTS (NR_036075) 916 NR_036075 100422824 NR_036075 ENSG00000265396 MIR3128 mir-3128 microRNA 3128 ncRNA chr6-2570 chr6 45532464 45532674 + 9.54 0.000 intron (NM_001015051, intron 7 of 7) intron (NM_001015051, intron 7 of 7) 110294 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr14-2816 chr14 23119068 23119278 + 9.54 0.000 5' UTR (NM_001805, exon 1 of 2) 5' UTR (NM_001805, exon 1 of 2) 438 NM_001805 1053 Hs.558308 NM_001805 ENSG00000092067 CEBPE C/EBP-epsilon|CRP1 CCAAT enhancer binding protein epsilon protein-coding chr5-8074 chr5 95255024 95255234 + 9.54 0.000 intron (NM_024717, intron 1 of 22) intron (NM_024717, intron 1 of 22) 29446 NM_024717 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr2-3370 chr2 3042238 3042448 + 9.54 0.000 intron (NR_110228, intron 3 of 6) intron (NR_110228, intron 3 of 6) 83683 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr1-4709 chr1 1031897 1032107 + 9.54 0.000 intron (NM_198576, intron 2 of 35) intron (NM_198576, intron 2 of 35) -1991 NM_001364727 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr6-2838 chr6 226971 227181 + 9.54 0.000 Intergenic MER21C|LTR|ERVL -21592 NR_126020 285766 Hs.657946 NR_126020 ENSG00000263667 LOC285766 - uncharacterized LOC285766 ncRNA chr6-4967 chr6 105178088 105178298 + 9.54 0.000 intron (NM_022361, intron 1 of 3) intron (NM_022361, intron 1 of 3) 1821 NM_022361 64208 Hs.458336 NM_022361 ENSG00000132429 POPDC3 POP3|bA355M14.1 popeye domain containing 3 protein-coding chr7-9138 chr7 110579417 110579627 + 9.54 0.000 Intergenic L1M8|LINE|L1 -511484 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr1-8997 chr1 10515525 10515735 + 9.54 0.000 intron (NM_004565, intron 2 of 8) intron (NM_004565, intron 2 of 8) 40680 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr1-4767 chr1 10628984 10629194 + 9.54 0.000 intron (NM_004565, intron 8 of 8) intron (NM_004565, intron 8 of 8) 154139 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr3-4636 chr3 23762883 23763093 + 9.54 0.000 Intergenic Intergenic -42967 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr1-6006 chr1 53176986 53177196 + 9.54 0.000 Intergenic Intergenic -19733 NM_000098 1376 Hs.713535 NM_000098 ENSG00000157184 CPT2 CPT1|CPTASE|IIAE4 carnitine palmitoyltransferase 2 protein-coding chr19-4208 chr19 46338341 46338551 + 9.54 0.000 TTS (NM_152796) TTS (NM_152796) -8641 NM_001204284 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr10-1768 chr10 48307103 48307313 + 9.54 0.000 intron (NM_001278547, intron 1 of 11) CpG 531 NM_001323331 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr17-4135 chr17 82086199 82086409 + 9.54 0.000 exon (NM_004104, exon 22 of 43) exon (NM_004104, exon 22 of 43) 3836 NR_132755 106633803 NR_132755 SNORD134 ZL12 small nucleolar RNA, C/D box 134 snoRNA chr15-1565 chr15 71273136 71273346 + 9.54 0.000 intron (NM_024817, intron 5 of 16) L1MA7|LINE|L1 -84182 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr1-2314 chr1 77219249 77219459 + 9.54 0.000 promoter-TSS (NM_005482) promoter-TSS (NM_005482) 76 NM_005482 10026 Hs.178305 NM_005482 ENSG00000142892 PIGK GPI8 phosphatidylinositol glycan anchor biosynthesis class K protein-coding chr2-9393 chr2 231392755 231392965 + 9.54 0.000 Intergenic Intergenic -2850 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chrX-3740 chrX 122847419 122847629 + 9.54 0.000 Intergenic Intergenic -336719 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr7-1468 chr7 101308315 101308525 + 9.54 0.000 non-coding (NR_110115, exon 1 of 2) non-coding (NR_110115, exon 1 of 2) 113 NR_110115 101927746 NR_110115 LOC101927746 - uncharacterized LOC101927746 ncRNA chrX-1857 chrX 112677440 112677650 + 9.54 0.000 intron (NM_178175, intron 1 of 3) intron (NM_178175, intron 1 of 3) 2393 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr1-3188 chr1 112404328 112404538 + 9.54 0.000 intron (NM_018704, intron 1 of 5) intron (NM_018704, intron 1 of 5) 8219 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr18-2094 chr18 49944779 49944989 + 9.54 0.000 intron (NM_001080467, intron 14 of 39) intron (NM_001080467, intron 14 of 39) 130861 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr19-5188 chr19 12954261 12954471 + 9.54 0.000 TTS (NM_001270362) TTS (NM_001270362) 2857 NM_052850 90480 Hs.515164 NM_052850 ENSG00000179271 GADD45GIP1 CKBBP2|CKbetaBP2|CRIF1|MRP-L59|PLINP|PLINP-1|PRG6|Plinp1 GADD45G interacting protein 1 protein-coding chr1-8313 chr1 47224873 47225083 + 9.54 0.000 intron (NM_001290406, intron 1 of 2) intron (NM_001290406, intron 1 of 2) 6737 NM_001287347 6886 Hs.705618 NM_003189 ENSG00000162367 TAL1 SCL|TCL5|bHLHa17|tal-1 TAL bHLH transcription factor 1, erythroid differentiation factor protein-coding chr7-7630 chr7 135960217 135960427 + 9.54 0.000 intron (NM_001128619, intron 1 of 3) intron (NM_001128619, intron 1 of 3) 17037 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding chr7-3273 chr7 17939288 17939498 + 9.54 0.000 intron (NM_001350862, intron 1 of 25) intron (NM_001350862, intron 1 of 25) 1101 NR_146933 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding chr9-5290 chr9 84002349 84002559 + 9.54 0.000 exon (NM_001358294, exon 3 of 3) exon (NM_001358294, exon 3 of 3) 21649 NM_024945 80010 Hs.726327 NM_024945 ENSG00000178966 RMI1 BLAP75|C9orf76|FAAP75 RecQ mediated genome instability 1 protein-coding chr3-4597 chr3 193708024 193708234 + 9.54 0.000 Intergenic L2c|LINE|L2 -80797 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA chr13-2976 chr13 75697395 75697605 + 9.54 0.000 intron (NM_001306080, intron 1 of 30) THE1B|LTR|ERVL-MaLR 61170 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr4-4659 chr4 83335900 83336110 + 9.54 0.000 promoter-TSS (NM_001166498) promoter-TSS (NM_001166498) -852 NM_001166498 10855 Hs.44227 NM_006665 ENSG00000173083 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding chr10-6554 chr10 73312226 73312436 + 9.54 0.000 intron (NM_001367801, intron 11 of 27) L1PA8|LINE|L1 46423 NM_001350934 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding chr3-8637 chr3 172201477 172201687 + 9.54 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 161051 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr17-5878 chr17 69433046 69433256 + 9.54 0.000 intron (NM_002758, intron 1 of 11) intron (NM_002758, intron 1 of 11) 18454 NM_002758 5608 Hs.49329 NM_002758 ENSG00000108984 MAP2K6 MAPKK6|MEK6|MKK6|PRKMK6|SAPKK-3|SAPKK3 mitogen-activated protein kinase kinase 6 protein-coding chr13-1985 chr13 23724537 23724747 + 9.54 0.000 Intergenic Intergenic 145282 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr11-6253 chr11 57171620 57171830 + 9.54 0.000 Intergenic MamRep38|DNA|hAT -10228 NM_001005210 219527 Hs.199853 NM_001005210 ENSG00000183908 LRRC55 - leucine rich repeat containing 55 protein-coding chr2-5264 chr2 60674650 60674860 + 9.54 0.000 Intergenic Intergenic -81513 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr16-6327 chr16 49495755 49495965 + 9.54 0.000 intron (NM_001271620, intron 7 of 7) intron (NM_001271620, intron 7 of 7) 22725 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr10-2654 chr10 93379896 93380106 + 9.54 0.000 intron (NM_013451, intron 20 of 53) intron (NM_013451, intron 20 of 53) 102333 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr1-16056 chr1 201845434 201845644 + 9.54 0.000 intron (NM_018085, intron 1 of 23) MER33|DNA|hAT-Charlie -15980 NR_046696 100873949 Hs.604842 NR_046696 ENSG00000231871 IPO9-AS1 - IPO9 antisense RNA 1 ncRNA chr2-5389 chr2 102141496 102141706 + 9.54 0.000 promoter-TSS (NM_001320981) promoter-TSS (NM_001320981) -190 NM_001320981 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr19-5003 chr19 47159304 47159514 + 9.54 0.000 intron (NM_005500, intron 5 of 8) L2a|LINE|L2 28574 NM_005500 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr12-3225 chr12 57098940 57099150 + 9.54 0.000 exon (NM_003153, exon 17 of 22) exon (NM_003153, exon 17 of 22) 9931 NM_005967 4665 Hs.159223 NM_005967 ENSG00000166886 NAB2 MADER NGFI-A binding protein 2 protein-coding chr1-10312 chr1 151530589 151530799 + 9.54 0.000 exon (NM_020770, exon 13 of 21) exon (NM_020770, exon 13 of 21) -9615 NM_001301317 7286 Hs.489922 NM_020127 ENSG00000143367 TUFT1 - tuftelin 1 protein-coding chr10-8469 chr10 88435080 88435290 + 9.54 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 148133 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr17-1807 chr17 82148167 82148377 + 9.54 0.000 intron (NM_001367828, intron 13 of 16) (TGGA)n|Simple_repeat|Simple_repeat -50036 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr3-8814 chr3 7496933 7497143 + 9.54 0.000 intron (NM_000844, intron 7 of 9) intron (NM_000844, intron 7 of 9) 38246 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr19-3719 chr19 42030659 42030869 + 9.54 0.000 intron (NM_002088, intron 11 of 18) intron (NM_002088, intron 11 of 18) 35041 NM_002088 2901 Hs.367799 NM_002088 ENSG00000105737 GRIK5 EAA2|GRIK2|GluK5|KA2 glutamate ionotropic receptor kainate type subunit 5 protein-coding chr4-7458 chr4 69868110 69868320 + 9.54 0.000 Intergenic ERVL-int|LTR|ERVL -8070 NM_005420 6783 Hs.479898 NM_005420 ENSG00000109193 SULT1E1 EST|EST-1|ST1E1|STE sulfotransferase family 1E member 1 protein-coding chr19-4524 chr19 7956677 7956887 + 9.54 0.000 Intergenic Intergenic -13116 NM_006351 10469 Hs.465784 NM_006351 ENSG00000104980 TIMM44 TIM44 translocase of inner mitochondrial membrane 44 protein-coding chr8-4676 chr8 138854553 138854763 + 9.54 0.000 intron (NM_152888, intron 3 of 64) intron (NM_152888, intron 3 of 64) 59383 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr12-3707 chr12 4753850 4754060 + 9.54 0.000 intron (NM_017417, intron 6 of 10) L1MA2|LINE|L1 33555 NM_017417 26290 Hs.511985 NM_017417 ENSG00000130035 GALNT8 GALNAC-T8 polypeptide N-acetylgalactosaminyltransferase 8 protein-coding chr11-9040 chr11 27242596 27242806 + 9.54 0.000 Intergenic Intergenic -22588 NR_125767 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr9-4245 chr9 90068894 90069104 + 9.54 0.000 Intergenic L1ME1|LINE|L1 -27500 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr3-8983 chr3 17131122 17131332 + 9.54 0.000 Intergenic MLT2B4|LTR|ERVL 198031 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr17-3745 chr17 28862086 28862296 + 9.54 0.000 promoter-TSS (NR_039885) promoter-TSS (NR_039885) -461 NR_039885 100616385 NR_039885 ENSG00000284085 MIR4732 mir-4732 microRNA 4732 ncRNA chr4-5872 chr4 125593214 125593424 + 9.54 0.000 Intergenic AluSc|SINE|Alu 86060 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr3-9983 chr3 98438368 98438578 + 9.54 0.000 Intergenic MER31A|LTR|ERV1 -31007 NM_001004736 26339 Hs.621533 NM_001004736 ENSG00000232382 OR5K1 HSHTPCRX10|HTPCRX10|OR3-8 olfactory receptor family 5 subfamily K member 1 protein-coding chr12-3049 chr12 4770714 4770924 + 9.54 0.000 intron (NM_017417, intron 10 of 10) intron (NM_017417, intron 10 of 10) -38357 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding chr12-7600 chr12 78619721 78619931 + 9.54 0.000 Intergenic Intergenic -244156 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr9-5329 chr9 87776691 87776901 + 9.54 0.000 intron (NR_027917, intron 3 of 4) intron (NR_027917, intron 3 of 4) 3881 NR_027917 392360 Hs.690450 NM_001023564 ENSG00000188029 CTSL3P CTSL3|HCTSL-s cathepsin L family member 3, pseudogene pseudo chrX-648 chrX 68822747 68822957 + 9.54 0.000 Intergenic Intergenic -6145 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr11-7964 chr11 7577827 7578037 + 9.54 0.000 promoter-TSS (NM_001351860) promoter-TSS (NM_001351860) 41 NM_001351860 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr11-7936 chr11 2694754 2694964 + 9.54 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 5139 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr4-7077 chr4 31739648 31739858 + 9.54 0.000 Intergenic Intergenic 233209 NR_149122 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr10-5220 chr10 62885805 62886015 + 9.54 0.000 Intergenic L2b|LINE|L2 -66743 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chr16-3176 chr16 82266292 82266502 + 9.54 0.000 Intergenic MER4B|LTR|ERV1 -96173 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr17-3689 chr17 15278598 15278808 + 9.54 0.000 Intergenic Intergenic -13377 NR_104017 5376 Hs.372031 NM_000304 ENSG00000109099 PMP22 CIDP|CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110 peripheral myelin protein 22 protein-coding chrX-2648 chrX 112188269 112188479 + 9.54 0.000 intron (NM_001004308, intron 2 of 2) intron (NM_001004308, intron 2 of 2) 105349 NM_001004308 340595 Hs.368140 NM_001004308 ENSG00000187823 RTL4 Mar4|Mart4|SIRH11|ZCCHC16 retrotransposon Gag like 4 protein-coding chr4-3551 chr4 179173678 179173888 + 9.54 0.000 Intergenic L1MB3|LINE|L1 -1265847 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr9-3684 chr9 100331619 100331829 + 9.54 0.000 intron (NM_001161584, intron 5 of 14) intron (NM_001161584, intron 5 of 14) 20847 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chrX-2245 chrX 46589856 46590066 + 9.54 0.000 intron (NM_019886, intron 1 of 1) intron (NM_019886, intron 1 of 1) 16196 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chr9-2902 chr9 133886173 133886383 + 9.54 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 106046 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr21-1035 chr21 24811949 24812159 + 9.54 0.000 Intergenic AluSc8|SINE|Alu -28496 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LINC01692 - long intergenic non-protein coding RNA 1692 ncRNA chr1-5804 chr1 201288530 201288740 + 9.54 0.000 intron (NM_001005337, intron 1 of 13) (CA)n|Simple_repeat|Simple_repeat 5129 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr1-14964 chr1 88723014 88723224 + 9.54 0.000 intron (NM_001320708, intron 1 of 20) AluSx1|SINE|Alu -37915 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr3-4099 chr3 106425050 106425260 + 9.54 0.000 Intergenic (TTTTG)n|Simple_repeat|Simple_repeat -555754 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr8-2274 chr8 98466639 98466849 + 9.54 0.000 intron (NM_006281, intron 10 of 10) intron (NM_006281, intron 10 of 10) 39786 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr1-4333 chr1 54579969 54580179 + 9.54 0.000 intron (NM_015547, intron 1 of 16) MIRb|SINE|MIR 31846 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr10-5021 chr10 33787353 33787563 + 9.54 0.000 Intergenic Intergenic -14778 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr11-1477 chr11 118791691 118791901 + 9.54 0.000 promoter-TSS (NM_004397) promoter-TSS (NM_004397) -632 NM_004397 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr19-2505 chr19 12973681 12973891 + 9.54 0.000 3' UTR (NM_152654, exon 2 of 2) 3' UTR (NM_152654, exon 2 of 2) 4168 NM_152654 199699 Hs.331981 NM_152654 ENSG00000179284 DAND5 CER2|CERL2|CKTSF1B3|COCO|CRL2|DANTE|GREM3|SP1 DAN domain BMP antagonist family member 5 protein-coding chr14-2891 chr14 36036340 36036550 + 9.54 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -33982 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chr6-7961 chr6 112223183 112223393 + 9.54 0.000 intron (NM_001105206, intron 2 of 38) intron (NM_001105206, intron 2 of 38) -13308 NR_121193 101927640 Hs.510007 NR_121193 LOC101927640 - uncharacterized LOC101927640 ncRNA chr2-8340 chr2 108931872 108932082 + 9.54 0.000 intron (NM_022336, intron 1 of 11) intron (NM_022336, intron 1 of 11) 57243 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr20-1033 chr20 44310905 44311115 + 9.54 0.000 exon (NM_001080472, exon 1 of 2) exon (NM_001080472, exon 1 of 2) 192 NM_001080472 128486 Hs.632269 NM_001080472 ENSG00000197296 FITM2 C20orf142|Fit2|dJ881L22.2 fat storage inducing transmembrane protein 2 protein-coding chr22-1436 chr22 45453169 45453379 + 9.54 0.000 Intergenic MIR|SINE|MIR 39581 NM_015653 26150 Hs.475110 NM_015653 ENSG00000128408 RIBC2 C22orf11|TRIB RIB43A domain with coiled-coils 2 protein-coding chr8-3228 chr8 138194422 138194632 + 9.54 0.000 intron (NM_015912, intron 9 of 19) MER5B|DNA|hAT-Charlie -110982 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chr3-1769 chr3 4980386 4980596 + 9.54 0.000 promoter-TSS (NR_037903) promoter-TSS (NR_037903) -530 NR_125916 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr1-12720 chr1 55560605 55560815 + 9.54 0.000 Intergenic Intergenic 335069 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr4-6229 chr4 61292528 61292738 + 9.54 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 90461 NM_001371342 chr8-5518 chr8 63306168 63306378 + 9.54 0.000 Intergenic L2a|LINE|L2 137270 NM_001277818 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 - YTH N6-methyladenosine RNA binding protein 3 protein-coding chr1-3451 chr1 27058123 27058333 + 9.54 0.000 Intergenic Intergenic -45378 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr13-2528 chr13 60637911 60638121 + 9.54 0.000 Intergenic Intergenic -34939 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chrX-913 chrX 3262992 3263202 + 9.54 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -8723 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 LINC01546 CXorf28 long intergenic non-protein coding RNA 1546 ncRNA chr3-3556 chr3 49418972 49419182 + 9.54 0.000 non-coding (NR_028435, exon 7 of 9) non-coding (NR_028435, exon 7 of 9) 3396 NR_028435 275 Hs.102 NM_000481 ENSG00000145020 AMT GCE|GCST|GCVT|NKH aminomethyltransferase protein-coding chr4-1415 chr4 7291412 7291622 + 9.54 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -18933 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr8-2546 chr8 28566238 28566448 + 9.54 0.000 3' UTR (NM_145866, exon 7 of 7) 3' UTR (NM_145866, exon 7 of 7) -61161 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr6-6191 chr6 12338692 12338902 + 9.54 0.000 Intergenic Intergenic 48436 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr7-3803 chr7 93150227 93150437 + 9.54 0.000 Intergenic PRIMA41-int|LTR|ERV1 -1947 NM_001350084 219285 Hs.489118 NM_152703 ENSG00000177409 SAMD9L ATXPC|C7orf6|DRIF2|UEF1 sterile alpha motif domain containing 9 like protein-coding chr14-4764 chr14 62931526 62931736 + 9.54 0.000 intron (NM_139318, intron 7 of 10) HAL1|LINE|L1 113827 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr3-3421 chr3 105426832 105427042 + 9.54 0.000 intron (NM_001243280, intron 1 of 14) intron (NM_001243280, intron 1 of 14) 60028 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr17-5761 chr17 60559044 60559254 + 9.54 0.000 Intergenic Intergenic -5397 NR_126009 388406 Hs.368309 NR_126009 ENSG00000267772 LINC01999 - long intergenic non-protein coding RNA 1999 ncRNA chr8-3759 chr8 23378939 23379149 + 9.54 0.000 intron (NM_002318, intron 1 of 13) L1PA5|LINE|L1 25076 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr7-4854 chr7 104962803 104963013 + 9.54 0.000 Intergenic MER5A|DNA|hAT-Charlie 28257 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr19-6647 chr19 33281704 33281914 + 9.54 0.000 Intergenic Intergenic 20725 NM_001287424 1050 Hs.76171 NM_004364 ENSG00000245848 CEBPA C/EBP-alpha|CEBP CCAAT enhancer binding protein alpha protein-coding chr3-2964 chr3 70194859 70195069 + 9.54 0.000 3' UTR (NM_001364676, exon 5 of 5) 3' UTR (NM_001364676, exon 5 of 5) 117674 NM_001364677 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr3-5396 chr3 157260742 157260952 + 9.54 0.000 3' UTR (NM_001167911, exon 13 of 13) 3' UTR (NM_001167911, exon 13 of 13) -100087 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr19-3568 chr19 47188798 47189008 + 9.54 0.000 intron (NM_001145713, intron 6 of 6) intron (NM_001145713, intron 6 of 6) -38039 NR_036158 100422899 NR_036158 ENSG00000265134 MIR3190 mir-3190 microRNA 3190 ncRNA chr19-3400 chr19 15870534 15870744 + 9.54 0.000 Intergenic AluSz|SINE|Alu -5715 NM_001302493 102724279 Hs.164360 NM_001302493 LINC01835 - long intergenic non-protein coding RNA 1835 protein-coding chr9-8259 chr9 111914130 111914340 + 9.54 0.000 intron (NM_003358, intron 1 of 8) intron (NM_003358, intron 1 of 8) 17421 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr15-2890 chr15 42326998 42327208 + 9.54 0.000 intron (NM_198141, intron 12 of 23) intron (NM_198141, intron 12 of 23) -32397 NM_024344 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr8-3302 chr8 26188118 26188328 + 9.54 0.000 Intergenic Intergenic -103285 NM_002717 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr7-8505 chr7 52727611 52727821 + 9.54 0.000 Intergenic L3|LINE|CR1 -307917 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr5-4662 chr5 36693104 36693314 + 9.54 0.000 Intergenic Intergenic 86603 NM_001166695 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr20-1194 chr20 5220547 5220757 + 9.54 0.000 Intergenic Intergenic 93644 NM_003818 8760 Hs.126857 NM_003818 ENSG00000101290 CDS2 - CDP-diacylglycerol synthase 2 protein-coding chr16-6503 chr16 59740572 59740782 + 9.54 0.000 Intergenic Intergenic 14514 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr14-4667 chr14 55254920 55255130 + 9.54 0.000 Intergenic Intergenic -16396 NM_017943 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr1-9861 chr1 65232582 65232792 + 9.54 0.000 TTS (NM_203464) TTS (NM_203464) -32007 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr9-8704 chr9 131147013 131147223 + 9.54 0.000 intron (NM_005085, intron 13 of 35) AluJr|SINE|Alu 21532 NM_005085 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr6-2954 chr6 35715653 35715863 + 9.54 0.000 intron (NM_001145775, intron 2 of 11) intron (NM_001145775, intron 2 of 11) 12825 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr20-909 chr20 50033951 50034161 + 9.54 0.000 Intergenic Intergenic 7573 NR_051976 100887755 Hs.195705 NR_051976 TRERNA1 LINC00651|treRNA translation regulatory long non-coding RNA 1 ncRNA chr3-6081 chr3 52190283 52190493 + 9.54 0.000 Intergenic Intergenic -7695 NM_199166 211 Hs.476308 NM_000688 ENSG00000023330 ALAS1 ALAS|ALAS-H|ALAS3|ALASH|MIG4 5'-aminolevulinate synthase 1 protein-coding chr9-7130 chr9 131569391 131569601 + 9.54 0.000 Intergenic AluSc|SINE|Alu 23973 NM_001365666 642515 NM_001365666 ENSG00000283526 PRRT1B DSPD2|IFITMD8 proline rich transmembrane protein 1B protein-coding chr3-4282 chr3 153313596 153313806 + 9.54 0.000 Intergenic HAL1|LINE|L1 151475 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr2-13418 chr2 141992681 141992891 + 9.54 0.000 intron (NM_018557, intron 1 of 90) intron (NM_018557, intron 1 of 90) 138915 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr17-1500 chr17 30520332 30520542 + 9.54 0.000 intron (NM_004871, intron 8 of 8) intron (NM_004871, intron 8 of 8) 43029 NM_001007024 9527 Hs.462680 NM_004871 ENSG00000108587 GOSR1 GOLIM2|GOS-28|GOS28|GOS28/P28|GS28|P28 golgi SNAP receptor complex member 1 protein-coding chr8-3478 chr8 100434515 100434725 + 9.54 0.000 Intergenic MER5A1|DNA|hAT-Charlie 51857 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr10-6661 chr10 103540726 103540936 + 9.54 0.000 intron (NM_004210, intron 1 of 5) intron (NM_004210, intron 1 of 5) -23389 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr19-2535 chr19 40233042 40233252 + 9.54 0.000 3' UTR (NM_001243028, exon 13 of 13) 3' UTR (NM_001243028, exon 13 of 13) -6458 NM_024877 79935 Hs.631603 NM_024877 ENSG00000105219 CNTD2 CCNP cyclin N-terminal domain containing 2 protein-coding chr6-6578 chr6 138261157 138261367 + 9.54 0.000 intron (NM_020340, intron 10 of 33) intron (NM_020340, intron 10 of 33) -42772 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr19-1994 chr19 10885685 10885895 + 9.54 0.000 intron (NM_001370089, intron 1 of 14) intron (NM_001370089, intron 1 of 14) 13361 NM_001370089 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr2-7245 chr2 227703602 227703812 + 9.54 0.000 intron (NM_001371413, intron 1 of 6) intron (NM_001371413, intron 1 of 6) 2949 NM_001371412 chr2-8739 chr2 160091736 160091946 + 9.54 0.000 Intergenic Intergenic -29226 NM_001195641 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr1-7068 chr1 183937091 183937301 + 9.54 0.000 3' UTR (NM_001303421, exon 12 of 12) 3' UTR (NM_001303421, exon 12 of 12) 100532 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr2-9690 chr2 44136224 44136434 + 9.54 0.000 Intergenic MER67C|LTR|ERV1 -32474 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr15-2817 chr15 38618658 38618868 + 9.54 0.000 Intergenic Intergenic -53949 NM_001128602 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr3-8811 chr3 7173042 7173252 + 9.54 0.000 intron (NM_000844, intron 2 of 9) MIR|SINE|MIR -279130 NR_131906 105376946 Hs.616038 NR_131906 ENSG00000237665 GRM7-AS2 - GRM7 antisense RNA 2 ncRNA chr9-5510 chr9 105532713 105532923 + 9.54 0.000 intron (NM_001287191, intron 10 of 13) intron (NM_001287191, intron 10 of 13) 12994 NR_104269 26134 Hs.113150 NR_104269 ENSG00000229419 RALGAPA1P1 GARNL2|GARNL2P|RALGAPA1P|bA235C23.1 Ral GTPase activating protein catalytic alpha subunit 1 pseudogene 1 pseudo chr10-4606 chr10 114819307 114819517 + 9.54 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -2368 NM_001135051 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding chr6-8413 chr6 150964941 150965151 + 9.54 0.000 intron (NM_001350486, intron 19 of 27) intron (NM_001350486, intron 19 of 27) -41962 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr1-10219 chr1 114690850 114691060 + 9.54 0.000 intron (NM_001172626, intron 1 of 14) intron (NM_001172626, intron 1 of 14) 4663 NM_000036 270 Hs.89570 NM_000036 ENSG00000116748 AMPD1 MAD|MADA|MMDD adenosine monophosphate deaminase 1 protein-coding chr12-3146 chr12 45545238 45545448 + 9.54 0.000 Intergenic Intergenic 182578 NR_028408 400027 Hs.597122 NR_028408 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA chr17-2882 chr17 35717406 35717616 + 9.54 0.000 intron (NM_001030006, intron 21 of 21) intron (NM_001030006, intron 21 of 21) -14128 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chrX-851 chrX 130336317 130336527 + 9.54 0.000 Intergenic HAL1b|LINE|L1 -3466 NM_001282197 9016 Hs.194686 NM_003951 ENSG00000102078 SLC25A14 BMCP1|UCP5 solute carrier family 25 member 14 protein-coding chr12-4753 chr12 52365013 52365223 + 9.54 0.000 promoter-TSS (NM_001300810) promoter-TSS (NM_001300810) -496 NM_001300810 3891 Hs.182507 NM_002283 ENSG00000135443 KRT85 ECTD4|HB5|Hb-5|K85|KRTHB5|hHb5 keratin 85 protein-coding chrX-4402 chrX 52866351 52866561 + 9.54 0.000 exon (NM_133179, exon 3 of 5) exon (NM_133179, exon 3 of 5) 845 NM_130776 170626 Hs.43879 NM_130776 ENSG00000171402 XAGE3 CT12.3a|CT12.3b|GAGED4|PLAC6|XAGE-3|pp9012 X antigen family member 3 protein-coding chr4-4721 chr4 89700992 89701202 + 9.54 0.000 Intergenic Intergenic -135304 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr2-8077 chr2 74268690 74268900 + 9.54 0.000 intron (NM_133478, intron 8 of 30) L1ME4a|LINE|L1 46230 NM_021196 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr17-8254 chr17 66748363 66748573 + 9.54 0.000 intron (NM_002737, intron 13 of 16) intron (NM_002737, intron 13 of 16) -38604 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr7-3596 chr7 27924580 27924790 + 9.54 0.000 intron (NM_175061, intron 2 of 4) intron (NM_175061, intron 2 of 4) 184590 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr1-6820 chr1 94903243 94903453 + 9.54 0.000 intron (NM_001839, intron 2 of 6) intron (NM_001839, intron 2 of 6) 22460 NM_001286056 1266 Hs.483454 NM_001839 ENSG00000117519 CNN3 - calponin 3 protein-coding chr5-7620 chr5 45355579 45355789 + 9.54 0.000 intron (NM_021072, intron 4 of 7) intron (NM_021072, intron 4 of 7) 340696 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr16-1782 chr16 2057023 2057233 + 9.54 0.000 exon (NM_001363528, exon 9 of 40) exon (NM_001363528, exon 9 of 40) 8926 NM_001318832 7249 Hs.90303 NM_000548 ENSG00000103197 TSC2 LAM|PPP1R160|TSC4 TSC complex subunit 2 protein-coding chr2-5665 chr2 200406656 200406866 + 9.54 0.000 intron (NM_001100423, intron 3 of 12) L2a|LINE|L2 97811 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr1-9917 chr1 74521312 74521522 + 9.54 0.000 intron (NM_015978, intron 23 of 24) MIR|SINE|MIR -8803 NM_001364666 105378803 NM_001364665 ENSG00000162621 LRRC53 - leucine rich repeat containing 53 protein-coding chr6-6044 chr6 126042085 126042295 + 9.54 0.000 intron (NR_146803, intron 15 of 16) intron (NR_146803, intron 15 of 16) 55650 NR_146804 60487 Hs.404186 NM_021820 ENSG00000066651 TRMT11 C6orf75|MDS024|TRM11|TRMT11-1 tRNA methyltransferase 11 homolog protein-coding chr11-7603 chr11 44589353 44589563 + 9.54 0.000 intron (NM_001024844, intron 2 of 8) intron (NM_001024844, intron 2 of 8) 23795 NM_002231 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr6-6612 chr6 148708184 148708394 + 9.54 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -38741 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr2-4864 chr2 101371240 101371450 + 9.54 0.000 intron (NM_153836, intron 2 of 3) intron (NM_153836, intron 2 of 3) 16158 NM_153836 200407 Hs.732289 NM_153836 ENSG00000175874 CREG2 - cellular repressor of E1A stimulated genes 2 protein-coding chr4-6117 chr4 19060401 19060611 + 9.54 0.000 Intergenic L1PA7|LINE|L1 -1038631 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr16-1573 chr16 85928472 85928682 + 9.54 0.000 Intergenic Intergenic 10230 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr1-7988 chr1 205529147 205529357 + 9.54 0.000 intron (NM_212503, intron 11 of 15) CpG-2141 24583 NM_002596 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr1-12017 chr1 99727863 99728073 + 9.54 0.000 intron (NM_001013660, intron 9 of 16) LTR87|LTR|ERVL? -15015 NR_031666 100302152 NR_031666 ENSG00000221669 MIR548N MIRN548N|hsa-mir-548n microRNA 548n ncRNA chr6-6480 chr6 112517062 112517272 + 9.54 0.000 Intergenic Intergenic 169837 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr18-2294 chr18 77652068 77652278 + 9.54 0.000 Intergenic Intergenic 341554 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr18-1062 chr18 23932631 23932841 + 9.54 0.000 intron (NM_001127717, intron 65 of 73) intron (NM_001127717, intron 65 of 73) 59716 NM_000227 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr13-2413 chr13 44364557 44364767 + 9.54 0.000 Intergenic Intergenic -8988 NM_001346980 387923 Hs.377972 NM_001010897 ENSG00000151778 SERP2 C13orf21|bA269C23.1 stress associated endoplasmic reticulum protein family member 2 protein-coding chr1-11146 chr1 235655004 235655214 + 9.54 0.000 Intergenic L1MEc|LINE|L1 -4355 NM_001098721 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr3-5128 chr3 52220602 52220812 + 9.54 0.000 TTS (NM_017442) TTS (NM_017442) 5456 NM_017442 54106 Hs.87968 NM_017442 ENSG00000239732 TLR9 CD289 toll like receptor 9 protein-coding chr19-6961 chr19 47753258 47753468 + 9.54 0.000 intron (NM_015710, intron 6 of 12) AluJb|SINE|Alu -2490 NR_003048 692091 Hs.745561 NR_003048 ENSG00000221803 SNORD23 HBII-115 small nucleolar RNA, C/D box 23 snoRNA chr18-1956 chr18 37249327 37249537 + 9.54 0.000 intron (NR_148521, intron 12 of 13) intron (NR_148521, intron 12 of 13) -25028 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr14-2083 chr14 71243881 71244091 + 9.54 0.000 Intergenic Intergenic -76490 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr4-2127 chr4 73764572 73764782 + 9.54 0.000 Intergenic MLT2A2|LTR|ERVL 24108 NM_000584 3576 Hs.624 NM_000584 ENSG00000169429 CXCL8 GCP-1|GCP1|IL8|LECT|LUCT|LYNAP|MDNCF|MONAP|NAF|NAP-1|NAP1 C-X-C motif chemokine ligand 8 protein-coding chr2-4239 chr2 219459471 219459681 + 9.54 0.000 intron (NM_005876, intron 6 of 40) intron (NM_005876, intron 6 of 40) -1236 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr3-10463 chr3 133796167 133796377 + 9.54 0.000 3' UTR (NM_001354703, exon 23 of 23) 3' UTR (NM_001354703, exon 23 of 23) -9543 NR_163491 58477 Hs.12152 NM_021203 ENSG00000144867 SRPRB APMCF1|SR-beta SRP receptor subunit beta protein-coding chr20-1483 chr20 12874238 12874448 + 9.54 0.000 intron (NR_109868, intron 10 of 11) intron (NR_109868, intron 10 of 11) 62620 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr5-2959 chr5 160109313 160109523 + 9.54 0.000 intron (NM_001349734, intron 1 of 4) intron (NM_001349734, intron 1 of 4) 10032 NR_146217 114825 Hs.744960 NM_052927 ENSG00000170234 PWWP2A MST101 PWWP domain containing 2A protein-coding chr5-4024 chr5 34736959 34737169 + 9.54 0.000 intron (NM_001145525, intron 4 of 19) MER1B|DNA|hAT-Charlie 49505 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr10-4774 chr10 4935752 4935962 + 9.54 0.000 Intergenic L2a|LINE|L2 -19584 NR_026743 389932 Hs.631812 NR_026743 AKR1C6P TAKR aldo-keto reductase family 1 member C6, pseudogene pseudo chr9-3240 chr9 137446271 137446481 + 9.54 0.000 Intergenic Intergenic 3710 NR_106964 102466223 NR_106964 ENSG00000284317 MIR7114 hsa-mir-7114 microRNA 7114 ncRNA chr11-6552 chr11 70459037 70459247 + 9.54 0.000 Intergenic L1ME3C|LINE|L1 60613 NM_005231 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr1-2628 chr1 110150396 110150606 + 9.54 0.000 promoter-TSS (NM_001010898) promoter-TSS (NM_001010898) 7 NM_001010898 388662 Hs.128382 NM_001010898 ENSG00000197106 SLC6A17 MRT48|NTT4 solute carrier family 6 member 17 protein-coding chr2-6237 chr2 32752667 32752877 + 9.54 0.000 intron (NM_017735, intron 12 of 19) intron (NM_017735, intron 12 of 19) -72661 NR_027099 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr7-4437 chr7 116809822 116810032 + 9.54 0.000 Intergenic Intergenic -52660 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr1-7516 chr1 154822221 154822431 + 9.54 0.000 intron (NM_001204087, intron 1 of 8) intron (NM_001204087, intron 1 of 8) 37550 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr19-1911 chr19 53365685 53365895 + 9.54 0.000 promoter-TSS (NM_001348156) promoter-TSS (NM_001348156) 85 NM_001348156 170958 Hs.352638 NM_001348156 ENSG00000203326 ZNF525 - zinc finger protein 525 protein-coding chr15-4641 chr15 63611883 63612093 + 9.54 0.000 intron (NM_003922, intron 77 of 77) AluSx|SINE|Alu -11161 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr8-1729 chr8 143343707 143343917 + 9.54 0.000 intron (NM_001258447, intron 1 of 13) intron (NM_001258447, intron 1 of 13) -8932 NM_052963 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr3-8191 chr3 41073514 41073724 + 9.54 0.000 Intergenic MER58B|DNA|hAT-Charlie -125886 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr12-3833 chr12 85179985 85180195 + 9.54 0.000 intron (NM_001079910, intron 24 of 26) intron (NM_001079910, intron 24 of 26) -100130 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr6-6609 chr6 147859227 147859437 + 9.54 0.000 Intergenic Intergenic 350642 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr4-7527 chr4 75409777 75409987 + 9.54 0.000 Intergenic L1MA5A|LINE|L1 55806 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr1-6143 chr1 170676585 170676795 + 9.54 0.000 intron (NM_022716, intron 1 of 3) MIRb|SINE|MIR 12559 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr5-2585 chr5 74870736 74870946 + 9.54 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -3875 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr22-2635 chr22 33621391 33621601 + 9.54 0.000 intron (NM_133642, intron 4 of 14) intron (NM_133642, intron 4 of 14) 83424 NR_145833 109616998 NR_145833 ENSG00000253007 SNORA50B - small nucleolar RNA, H/ACA box 50B snoRNA chr12-3525 chr12 132069639 132069849 + 9.54 0.000 intron (NM_015409, intron 51 of 52) intron (NM_015409, intron 51 of 52) -14539 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400P1 EP400NL EP400 pseudogene 1 pseudo chrX-4309 chrX 44358763 44358973 + 9.54 0.000 Intergenic L1MA8|LINE|L1 -15196 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr2-9260 chr2 219840651 219840861 + 9.54 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 64133 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr3-2454 chr3 58491857 58492067 + 9.54 0.000 promoter-TSS (NM_001128214) promoter-TSS (NM_001128214) -134 NM_001128214 200845 Hs.13982 NM_153331 ENSG00000168301 KCTD6 KCASH3 potassium channel tetramerization domain containing 6 protein-coding chr4-6089 chr4 9907560 9907770 + 9.54 0.000 intron (NM_001001290, intron 9 of 12) intron (NM_001001290, intron 9 of 12) 113832 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr4-4888 chr4 118749630 118749840 + 9.54 0.000 intron (NM_014822, intron 13 of 22) intron (NM_014822, intron 13 of 22) 64343 NM_020961 57721 Hs.596872 NM_020961 ENSG00000145388 METTL14 hMETTL14 methyltransferase like 14 protein-coding chr6-4031 chr6 127634302 127634512 + 9.54 0.000 Intergenic L1PA13|LINE|L1 57233 NM_001010905 352999 Hs.226268 NM_001010905 ENSG00000184530 C6orf58 LEG1 chromosome 6 open reading frame 58 protein-coding chr19-1407 chr19 44745466 44745676 + 9.54 0.000 Intergenic Intergenic -3137 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr21-401 chr21 39314247 39314457 + 9.54 0.000 promoter-TSS (NM_033656) promoter-TSS (NM_033656) 445 NR_111942 103091865 Hs.190548 NR_111942 ENSG00000255568 BRWD1-AS2 BRWD1-IT2|C21orf87|NCRNA00257 BRWD1 antisense RNA 2 ncRNA chr18-705 chr18 3593708 3593918 + 9.54 0.000 promoter-TSS (NR_024101) promoter-TSS (NR_024101) -301 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914 DLGAP1 antisense RNA 1 ncRNA chr2-5084 chr2 10644397 10644607 + 9.54 0.000 intron (NR_048552, intron 11 of 19) intron (NR_048552, intron 11 of 19) 45473 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr6-7999 chr6 116268654 116268864 + 9.54 0.000 intron (NM_001322937, intron 2 of 6) intron (NM_001322937, intron 2 of 6) -11327 NR_136521 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr2-5493 chr2 139174999 139175209 + 9.54 0.000 Intergenic Intergenic 277780 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr7-3801 chr7 92667842 92668052 + 9.54 0.000 intron (NM_001259, intron 5 of 7) Tigger3b|DNA|TcMar-Tigger -77557 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr13-2214 chr13 23453752 23453962 + 9.54 0.000 Intergenic Intergenic -15655 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr6-7025 chr6 23890542 23890752 + 9.54 0.000 Intergenic Intergenic -235568 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr13-2607 chr13 75357592 75357802 + 9.54 0.000 intron (NM_001286658, intron 3 of 19) intron (NM_001286658, intron 3 of 19) 117109 NR_132375 106144536 Hs.591226 NR_132375 LINC01078 - long intergenic non-protein coding RNA 1078 ncRNA chr8-3601 chr8 141288652 141288862 + 9.54 0.000 Intergenic Intergenic -34128 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr3-2543 chr3 50441731 50441941 + 9.54 0.000 intron (NM_001291101, intron 2 of 37) intron (NM_001291101, intron 2 of 37) 61798 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr14-3232 chr14 75353429 75353639 + 9.54 0.000 Intergenic Intergenic 59130 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr15-1992 chr15 42344756 42344966 + 9.54 0.000 intron (NM_198141, intron 19 of 23) intron (NM_198141, intron 19 of 23) -14639 NM_024344 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr12-7080 chr12 43077435 43077645 + 9.54 0.000 Intergenic L1MC1|LINE|L1 -77775 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr20-704 chr20 32681535 32681745 + 9.54 0.000 Intergenic Intergenic -7699 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr2-2124 chr2 46269578 46269788 + 9.54 0.000 Intergenic Intergenic -27724 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr22-1509 chr22 43295417 43295627 + 9.54 0.000 intron (NM_173050, intron 3 of 21) intron (NM_173050, intron 3 of 21) 19580 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr9-2454 chr9 18721335 18721545 + 9.54 0.000 intron (NM_001040272, intron 14 of 28) intron (NM_001040272, intron 14 of 28) 148134 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr9-3626 chr9 90967761 90967971 + 9.54 0.000 Intergenic Intergenic 107266 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr15-2664 chr15 76591860 76592070 + 9.54 0.000 intron (NR_148227, intron 22 of 32) AluJb|SINE|Alu 5318 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr11-7316 chr11 61537865 61538075 + 9.54 0.000 intron (NM_001370211, intron 3 of 7) intron (NM_001370211, intron 3 of 7) 4906 NM_001370210 9066 Hs.131188 NM_004200 ENSG00000011347 SYT7 IPCA-7|IPCA7|PCANAP7|SYT-VII|SYTVII synaptotagmin 7 protein-coding chr4-4110 chr4 6475692 6475902 + 9.54 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) -3183 NM_001363388 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr2-9372 chr2 229502307 229502517 + 9.54 0.000 intron (NM_139072, intron 6 of 12) MER21-int|LTR|ERVL 212143 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr10-5738 chr10 101987202 101987412 + 9.54 0.000 intron (NM_024541, intron 19 of 25) L2c|LINE|L2 68866 NM_024541 79591 Hs.16004 NM_024541 ENSG00000120029 ARMH3 C10orf76 armadillo like helical domain containing 3 protein-coding chr6-5904 chr6 45923709 45923919 + 9.54 0.000 intron (NR_045673, intron 1 of 4) intron (NR_045673, intron 1 of 4) 13783 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr1-8584 chr1 179143364 179143574 + 9.54 0.000 promoter-TSS (NM_005158) promoter-TSS (NM_005158) -393 NM_005158 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr1-4940 chr1 48237630 48237840 + 9.54 0.000 exon (NM_001011547, exon 11 of 14) exon (NM_001011547, exon 11 of 14) 15019 NM_001135181 200010 Hs.37890 NM_001011547 ENSG00000117834 SLC5A9 SGLT4 solute carrier family 5 member 9 protein-coding chr20-825 chr20 2852270 2852480 + 9.54 0.000 intron (NM_022575, intron 1 of 23) LTR41B|LTR|ERVL -11224 NM_001271168 64773 Hs.29341 NM_022760 ENSG00000132635 PCED1A C20orf81|FAM113A|bA12M19.1 PC-esterase domain containing 1A protein-coding chr11-8180 chr11 63303306 63303516 + 9.54 0.000 intron (NM_001039752, intron 7 of 9) L3|LINE|CR1 13508 NM_001039752 387775 Hs.188982 NM_001039752 ENSG00000184999 SLC22A10 OAT5|hOAT5 solute carrier family 22 member 10 protein-coding chr1-3315 chr1 11134398 11134608 + 9.54 0.000 intron (NM_004958, intron 36 of 57) intron (NM_004958, intron 36 of 57) -9395 NR_046600 100873935 Hs.679133 NR_046600 ENSG00000225602 MTOR-AS1 - MTOR antisense RNA 1 ncRNA chr12-7570 chr12 75253735 75253945 + 9.54 0.000 Intergenic MSTB|LTR|ERVL-MaLR 19100 NR_149000 100130268 Hs.524596 NR_149000 ENSG00000254451 LOC100130268 - uncharacterized LOC100130268 ncRNA chr3-6851 chr3 149604420 149604630 + 9.54 0.000 intron (NM_001348362, intron 5 of 9) intron (NM_001348362, intron 5 of 9) 53500 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr11-6021 chr11 25351948 25352158 + 9.54 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -837070 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr8-4488 chr8 118574849 118575059 + 9.54 0.000 intron (NM_001101676, intron 2 of 4) intron (NM_001101676, intron 2 of 4) -46047 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr4-2125 chr4 73021695 73021905 + 9.54 0.000 Intergenic Intergenic 47916 NM_173827 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding chr3-9690 chr3 65145032 65145242 + 9.54 0.000 Intergenic Intergenic -457137 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr12-7449 chr12 62880323 62880533 + 9.54 0.000 intron (NM_020700, intron 1 of 9) L2b|LINE|L2 54722 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr2-10970 chr2 94872471 94872681 + 9.54 0.000 intron (NM_144705, intron 1 of 5) intron (NM_144705, intron 1 of 5) 1146 NM_001286559 150483 Hs.631517 NM_144705 ENSG00000163060 TEKT4 - tektin 4 protein-coding chrX-3893 chrX 7171451 7171661 + 9.54 0.000 intron (NM_001320751, intron 2 of 11) intron (NM_001320751, intron 2 of 11) -23403 NM_001178135 8226 Hs.185910 NM_012080 ENSG00000130021 PUDP DXF68S1E|FAM16AX|GS1|HDHD1|HDHD1A pseudouridine 5'-phosphatase protein-coding chr5-3463 chr5 168129132 168129342 + 9.54 0.000 intron (NM_001368145, intron 11 of 26) intron (NM_001368145, intron 11 of 26) -36608 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr1-11163 chr1 238097942 238098152 + 9.54 0.000 Intergenic AluSq2|SINE|Alu -207125 NM_021186 57829 Hs.136241 NM_021186 ENSG00000116996 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding chr4-3693 chr4 54432480 54432690 + 9.54 0.000 Intergenic Intergenic 99693 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr9-3309 chr9 86239212 86239422 + 9.54 0.000 intron (NM_001276367, intron 1 of 4) L1ME4a|LINE|L1 16716 NM_001276368 389766 Hs.632073 NM_001010907 ENSG00000187753 C9orf153 bA507D14.1 chromosome 9 open reading frame 153 protein-coding chr6-6653 chr6 158809124 158809334 + 9.54 0.000 intron (NM_003379, intron 1 of 12) intron (NM_003379, intron 1 of 12) -8750 NR_102425 101409257 Hs.571207 NR_102425 ENSG00000233893 EZR-AS1 - EZR antisense RNA 1 ncRNA chr13-2987 chr13 91739200 91739410 + 9.54 0.000 intron (NM_004466, intron 4 of 7) LTR16A1|LTR|ERVL 340684 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr9-1089 chr9 41274005 41274215 + 9.54 0.000 Intergenic TAR1|Satellite|telo -40275 NR_039689 100616194 NR_039689 ENSG00000266017 MIR4477B - microRNA 4477b ncRNA chr3-5258 chr3 109313579 109313789 + 9.54 0.000 intron (NM_138815, intron 2 of 8) intron (NM_138815, intron 2 of 8) 2833 NM_138815 151871 Hs.351113 NM_138815 ENSG00000163530 DPPA2 CT100|ECAT15-2|PESCRG1 developmental pluripotency associated 2 protein-coding chr2-4574 chr2 84888499 84888709 + 9.54 0.000 Intergenic L2b|LINE|L2 -7520 NM_001307978 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr11-3515 chr11 1508414 1508624 + 9.54 0.000 Intergenic Intergenic -21740 NM_001172223 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr11-7188 chr11 130865913 130866123 + 9.54 0.000 TTS (NR_125382) TTS (NR_125382) -3908 NR_125383 100507431 Hs.375101 NR_125383 LINC02551 - long intergenic non-protein coding RNA 2551 ncRNA chr7-3102 chr7 23742348 23742558 + 9.54 0.000 intron (NM_031414, intron 8 of 23) L1M2a1|LINE|L1 32234 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr4-2903 chr4 82420604 82420814 + 9.54 0.000 Intergenic AluSg|SINE|Alu 9516 NM_001207000 9987 Hs.527105 NM_005463 ENSG00000152795 HNRNPDL HNRNP|HNRPDL|JKTBP|JKTBP2|LGMD1G|LGMDD3|laAUF1 heterogeneous nuclear ribonucleoprotein D like protein-coding chr20-935 chr20 17280527 17280737 + 9.54 0.000 intron (NM_002594, intron 2 of 11) intron (NM_002594, intron 2 of 11) 53592 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr6-5771 chr6 166797406 166797616 + 9.54 0.000 intron (NM_001318936, intron 2 of 22) Tigger2a|DNA|TcMar-Tigger 65014 NM_001318937 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr6-3027 chr6 52590654 52590864 + 9.54 0.000 Intergenic Intergenic 13461 NR_103447 401264 Hs.544586 NR_103446 ENSG00000225791 TRAM2-AS1 - TRAM2 antisense RNA 1 (head to head) ncRNA chr5-8935 chr5 158169910 158170120 + 9.54 0.000 Intergenic MamGypLTR3|LTR|Gypsy 239758 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr20-2110 chr20 32192180 32192390 + 9.54 0.000 TTS (NM_002657) TTS (NM_002657) -1925 NR_002781 128854 Hs.647447 NR_002781 ENSG00000235217 TSPY26P TSPYL3|bA392M18.1 testis specific protein Y-linked 26, pseudogene pseudo chr8-4641 chr8 134377096 134377306 + 9.54 0.000 Intergenic Intergenic -220870 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr2-4716 chr2 232937431 232937641 + 9.54 0.000 intron (NM_019850, intron 3 of 14) intron (NM_019850, intron 3 of 14) -9385 NM_001114090 25791 Hs.97316 NM_019850 ENSG00000066248 NGEF ARHGEF27|EPHEXIN neuronal guanine nucleotide exchange factor protein-coding chr2-11027 chr2 108908647 108908857 + 9.54 0.000 intron (NM_022336, intron 9 of 11) intron (NM_022336, intron 9 of 11) 80468 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr5-8920 chr5 157469793 157470003 + 9.54 0.000 intron (NM_001099287, intron 4 of 5) intron (NM_001099287, intron 4 of 5) -9798 NR_136205 102724404 Hs.570889 NR_136204 LOC102724404 - uncharacterized LOC102724404 ncRNA chr13-4018 chr13 71879197 71879407 + 9.54 0.000 Intergenic Intergenic -12098 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr22-3438 chr22 40036718 40036928 + 9.54 0.000 3' UTR (NM_138435, exon 5 of 5) 3' UTR (NM_138435, exon 5 of 5) 7707 NR_163486 114841040 Hs.474880 NR_163486 LOC114841040 - uncharacterized LOC114841040 ncRNA chr10-6930 chr10 52044996 52045206 + 9.54 0.000 intron (NM_001098512, intron 5 of 17) intron (NM_001098512, intron 5 of 17) 269027 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr2-3404 chr2 41871430 41871640 + 9.54 0.000 Intergenic Intergenic -6020 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr8-6185 chr8 34146385 34146595 + 9.54 0.000 Intergenic L1MDa|LINE|L1 -546384 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr5-3137 chr5 60509790 60510000 + 9.54 0.000 intron (NR_024617, intron 1 of 3) intron (NR_024617, intron 1 of 3) -13609 NM_001364599 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-4755 chr2 14948878 14949088 + 9.54 0.000 Intergenic L1M3f|LINE|L1 316266 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr2-7226 chr2 220224831 220225041 + 9.54 0.000 Intergenic Intergenic -318371 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr22-1476 chr22 20013457 20013667 + 9.54 0.000 intron (NM_001670, intron 1 of 19) intron (NM_001670, intron 1 of 19) 3261 NM_001670 421 Hs.713616 NM_001670 ENSG00000099889 ARVCF - ARVCF delta catenin family member protein-coding chr8-2905 chr8 143461332 143461542 + 9.54 0.000 intron (NM_015117, intron 9 of 11) L1ME1|LINE|L1 -30705 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr8-3274 chr8 19127990 19128200 + 9.54 0.000 Intergenic L3|LINE|CR1 -114392 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr17-2556 chr17 47267435 47267645 + 9.54 0.000 intron (NM_000212, intron 1 of 14) intron (NM_000212, intron 1 of 14) 13698 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chr20-823 chr20 63583224 63583434 + 9.54 0.000 Intergenic L1ME2|LINE|L1 -9090 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr13-1737 chr13 105836899 105837109 + 9.54 0.000 Intergenic Intergenic 130174 NR_120418 144920 Hs.567700 NR_046391 LINC00343 LINC00344|NCRNA00343|NCRNA00344 long intergenic non-protein coding RNA 343 ncRNA chr16-6692 chr16 70391731 70391941 + 9.54 0.000 intron (NM_006927, intron 3 of 6) AluJo|SINE|Alu 44933 NM_018332 55308 Hs.656037 NM_018332 ENSG00000168872 DDX19A DDX19-DDX19L|DDX19L DEAD-box helicase 19A protein-coding chr2-7433 chr2 10889459 10889669 + 9.54 0.000 Intergenic LTR16D|LTR|ERVL 11297 NR_110575 101929733 Hs.736697 NR_110575 ENSG00000271952 LINC01954 - long intergenic non-protein coding RNA 1954 ncRNA chr8-3397 chr8 63172546 63172756 + 9.54 0.000 intron (NM_001277816, intron 2 of 3) MIRc|SINE|MIR 3648 NM_001277818 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 - YTH N6-methyladenosine RNA binding protein 3 protein-coding chrX-4681 chrX 84170601 84170811 + 9.54 0.000 intron (NM_014496, intron 1 of 21) intron (NM_014496, intron 1 of 21) 17229 NM_001330512 27330 Hs.234478 NM_014496 ENSG00000072133 RPS6KA6 PP90RSK4|RSK-4|RSK4|S6K-alpha-6|p90RSK6 ribosomal protein S6 kinase A6 protein-coding chr10-6097 chr10 132250944 132251154 + 9.54 0.000 intron (NM_001318878, intron 1 of 11) intron (NM_001318878, intron 1 of 11) -1941 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr10-2172 chr10 125743734 125743944 + 9.54 0.000 TTS (NR_120633) TTS (NR_120633) 8221 NR_120633 101927983 Hs.634269 NR_120633 ENSG00000236991 EDRF1-AS1 - EDRF1 antisense RNA 1 ncRNA chr17-4240 chr17 48639705 48639915 + 9.54 0.000 Intergenic Intergenic -7251 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr4-5456 chr4 34033800 34034010 + 9.54 0.000 intron (NR_125902, intron 1 of 4) intron (NR_125902, intron 1 of 4) 5988 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr5-1812 chr5 75048483 75048693 + 9.54 0.000 intron (NM_001366737, intron 2 of 3) intron (NM_001366737, intron 2 of 3) 3970 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding chr4-3804 chr4 110452947 110453157 + 9.54 0.000 Intergenic LTR88c|LTR|Gypsy? -23103 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr17-4883 chr17 68075997 68076207 + 9.54 0.000 Intergenic Intergenic -25453 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr3-9913 chr3 86760178 86760388 + 9.54 0.000 Intergenic L1PB2|LINE|L1 230866 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr16-5175 chr16 4789259 4789469 + 9.54 0.000 intron (NM_001253790, intron 1 of 4) AluY|SINE|Alu 908 NM_001253791 440335 Hs.390599 NM_001253790 ENSG00000267795 SMIM22 CASIMO1 small integral membrane protein 22 protein-coding chr2-6218 chr2 26573248 26573458 + 9.54 0.000 intron (NM_001322426, intron 2 of 4) intron (NM_001322426, intron 2 of 4) 10766 NM_001322426 339778 Hs.407083 NM_001105519 ENSG00000173557 C2orf70 - chromosome 2 open reading frame 70 protein-coding chr11-7283 chr11 35825268 35825478 + 9.54 0.000 Intergenic Intergenic -118608 NM_001304263 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr3-3208 chr3 194298823 194299033 + 9.54 0.000 Intergenic Intergenic 13876 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr3-6368 chr3 87591565 87591775 + 9.54 0.000 Intergenic Intergenic -201036 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr2-8731 chr2 159306643 159306853 + 9.54 0.000 Intergenic MER47A|DNA|TcMar-Tigger -20045 NM_001330276 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr4-6502 chr4 157280588 157280798 + 9.54 0.000 intron (NM_001083620, intron 2 of 15) MLT1H2|LTR|ERVL-MaLR 59965 NM_000826 2891 Hs.32763 NM_000826 ENSG00000120251 GRIA2 GLUR2|GLURB|GluA2|GluR-K2|HBGR2 glutamate ionotropic receptor AMPA type subunit 2 protein-coding chr3-2697 chr3 56861648 56861858 + 9.54 0.000 intron (NM_001128615, intron 4 of 12) intron (NM_001128615, intron 4 of 12) 54683 NM_001289698 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr11-8047 chr11 23415238 23415448 + 9.54 0.000 Intergenic MER103C|DNA|hAT-Charlie 3847 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chrX-3036 chrX 86641608 86641818 + 9.54 0.000 intron (NM_001139515, intron 3 of 11) L1PA14|LINE|L1 378745 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr9-8305 chr9 114082563 114082773 + 9.54 0.000 Intergenic Intergenic -4368 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr10-1703 chr10 43899309 43899519 + 9.54 0.000 Intergenic ERVL-E-int|LTR|ERVL -9882 NR_033846 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr1-10464 chr1 161782141 161782351 + 9.54 0.000 intron (NM_007348, intron 3 of 15) (GAATTAT)n|Simple_repeat|Simple_repeat 15926 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chrX-5444 chrX 154308226 154308436 + 9.54 0.000 intron (NM_001145934, intron 1 of 11) L2a|LINE|L2 3274 NM_001145934 8277 Hs.102866 NM_012253 ENSG00000007350 TKTL1 TKR|TKT2 transketolase like 1 protein-coding chr17-3168 chr17 75575449 75575659 + 9.54 0.000 TTS (NM_001031803) TTS (NM_001031803) -12504 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr18-2385 chr18 76487938 76488148 + 9.54 0.000 intron (NM_014643, intron 1 of 6) intron (NM_014643, intron 1 of 6) -3609 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr2-10215 chr2 103669577 103669787 + 9.54 0.000 Intergenic Intergenic -685253 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr9-8047 chr9 96309836 96310046 + 9.54 0.000 Intergenic Intergenic -7765 NM_000197 3293 Hs.477 NM_000197 ENSG00000130948 HSD17B3 EDH17B3|SDR12C2 hydroxysteroid 17-beta dehydrogenase 3 protein-coding chr10-7835 chr10 44801218 44801428 + 9.54 0.000 Intergenic L1MDa|LINE|L1 -109993 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr11-2204 chr11 47352894 47353104 + 9.54 0.000 promoter-TSS (NM_000256) promoter-TSS (NM_000256) -297 NM_000256 4607 Hs.524906 NM_000256 ENSG00000134571 MYBPC3 CMD1MM|CMH4|FHC|LVNC10|MYBP-C myosin binding protein C, cardiac protein-coding chr17-3572 chr17 80135103 80135313 + 9.54 0.000 3' UTR (NM_014740, exon 12 of 12) 3' UTR (NM_014740, exon 12 of 12) 11920 NM_014740 9775 Hs.389649 NM_014740 ENSG00000141543 EIF4A3 DDX48|Fal1|MUK34|NMP265|NUK34|RCPS|eIF-4A-III|eIF4A-III|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding chr8-1143 chr8 141000275 141000485 + 9.54 0.000 intron (NM_001352737, intron 1 of 32) CpG 624 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr1-8970 chr1 9604618 9604828 + 9.54 0.000 3' UTR (NM_001010866, exon 6 of 6) 3' UTR (NM_001010866, exon 6 of 6) 15812 NM_001130924 199953 Hs.632365 NM_001010866 ENSG00000188807 TMEM201 Ima1|NET5|SAMP1 transmembrane protein 201 protein-coding chr1-4167 chr1 23792273 23792483 + 9.54 0.000 intron (NM_007260, intron 1 of 9) intron (NM_007260, intron 1 of 9) 1233 NM_007260 11313 Hs.533479 NM_007260 ENSG00000011009 LYPLA2 APT-2|APT2|DJ886K2.4 lysophospholipase 2 protein-coding chr16-1562 chr16 84754220 84754430 + 9.54 0.000 intron (NR_073578, intron 3 of 10) intron (NR_073578, intron 3 of 10) 54325 NR_073577 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr8-3630 chr8 467639 467849 + 9.54 0.000 exon (NM_183421, exon 10 of 11) exon (NM_183421, exon 10 of 11) 48008 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr2-11506 chr2 237062664 237062874 + 9.54 0.000 Intergenic Intergenic -6602 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr10-2651 chr10 92596862 92597072 + 9.54 0.000 intron (NM_004523, intron 1 of 21) intron (NM_004523, intron 1 of 21) 3837 NM_004523 3832 Hs.8878 NM_004523 ENSG00000138160 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding chr13-807 chr13 20148079 20148289 + 9.54 0.000 intron (NM_021954, intron 1 of 1) intron (NM_021954, intron 1 of 1) 12868 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr1-15255 chr1 113307976 113308186 + 9.54 0.000 Intergenic Intergenic -82434 NM_001142782 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr5-5720 chr5 168537992 168538202 + 9.54 0.000 Intergenic Intergenic 8792 NM_001355274 345630 Hs.166262 NM_001355274 ENSG00000188573 FBLL1 - fibrillarin like 1 protein-coding chr12-4948 chr12 71561196 71561406 + 9.54 0.000 intron (NM_001277226, intron 7 of 16) intron (NM_001277226, intron 7 of 16) 102547 NM_144982 196441 Hs.245798 NM_144982 ENSG00000133858 ZFC3H1 CCDC131|CSRC2|PSRC2 zinc finger C3H1-type containing protein-coding chrX-773 chrX 40171781 40171991 + 9.54 0.000 intron (NM_001123384, intron 1 of 13) CpG 5391 NM_001123384 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr4-7139 chr4 37666816 37667026 + 9.54 0.000 intron (NM_001085400, intron 1 of 6) intron (NM_001085400, intron 1 of 6) 19455 NM_001085400 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr4-6086 chr4 8694665 8694875 + 9.54 0.000 Intergenic Intergenic 102005 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr21-1124 chr21 37056175 37056385 + 9.54 0.000 Intergenic Intergenic 7786 NR_131189 105372795 Hs.528019 NR_131189 LOC105372795 - uncharacterized LOC105372795 ncRNA chr3-9709 chr3 65855675 65855885 + 9.54 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -38036 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr11-6269 chr11 58496844 58497054 + 9.54 0.000 Intergenic L1PA15|LINE|L1 11156 NM_001005218 219968 Hs.553647 NM_001005218 ENSG00000198283 OR5B21 - olfactory receptor family 5 subfamily B member 21 protein-coding chr3-3846 chr3 32995342 32995552 + 9.54 0.000 Intergenic Intergenic 43803 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr22-1134 chr22 42437629 42437839 + 9.54 0.000 5' UTR (NM_001371362, exon 1 of 8) 5' UTR (NM_001371362, exon 1 of 8) 252 NM_001371362 chr16-3727 chr16 6527556 6527766 + 9.54 0.000 intron (NM_018723, intron 2 of 15) intron (NM_018723, intron 2 of 15) -246148 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr20-4343 chr20 54212885 54213095 + 9.54 0.000 intron (NM_002623, intron 1 of 3) intron (NM_002623, intron 1 of 3) 4903 NM_002623 5203 Hs.91161 NM_002623 ENSG00000101132 PFDN4 C1|PFD4 prefoldin subunit 4 protein-coding chr2-7732 chr2 36570631 36570841 + 9.54 0.000 intron (NM_001042548, intron 5 of 8) Tigger3a|DNA|TcMar-Tigger 27432 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr8-7145 chr8 121673563 121673773 + 9.54 0.000 Intergenic Intergenic -32228 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr3-5482 chr3 188306467 188306677 + 9.54 0.000 intron (NM_005578, intron 2 of 10) Charlie8|DNA|hAT-Charlie 81167 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr15-4135 chr15 84126972 84127182 + 9.54 0.000 TTS (NR_036652) TTS (NR_036652) 43907 NR_033787 440299 Hs.454641 NR_033787 DNM1P41 DNM1DN11-6|DNM1DN11.6|DNM1DN11@ dynamin 1 pseudogene 41 pseudo chr16-1602 chr16 66631007 66631217 + 9.54 0.000 intron (NM_181521, intron 2 of 3) SVA_D|Retroposon|SVA 26381 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr7-9512 chr7 138755341 138755551 + 9.54 0.000 intron (NM_130840, intron 9 of 20) intron (NM_130840, intron 9 of 20) 18591 NM_130841 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr5-3977 chr5 13567858 13568068 + 9.54 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 376517 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr8-6280 chr8 42293174 42293384 + 9.54 0.000 intron (NR_033819, intron 4 of 20) intron (NR_033819, intron 4 of 20) 21977 NR_040009 3551 Hs.597664 NM_001556 ENSG00000104365 IKBKB IKK-beta|IKK2|IKKB|IMD15|IMD15A|IMD15B|NFKBIKB inhibitor of nuclear factor kappa B kinase subunit beta protein-coding chr6-2066 chr6 113632350 113632560 + 9.54 0.000 intron (NR_125844, intron 1 of 2) intron (NR_125844, intron 1 of 2) 17620 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chr13-3766 chr13 43610144 43610354 + 9.54 0.000 intron (NM_001127615, intron 1 of 16) intron (NM_001127615, intron 1 of 16) 19228 NM_001127615 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr1-6526 chr1 27119092 27119302 + 9.54 0.000 intron (NM_003047, intron 1 of 11) intron (NM_003047, intron 1 of 11) 35928 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr10-5030 chr10 34742562 34742772 + 9.54 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 72629 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr6-6249 chr6 33684696 33684906 + 9.54 0.000 exon (NM_002224, exon 39 of 58) exon (NM_002224, exon 39 of 58) -13327 NR_037498 100500873 NR_037498 ENSG00000266509 MIR3934 - microRNA 3934 ncRNA chr1-6907 chr1 147292104 147292314 + 9.54 0.000 intron (NM_001348462, intron 20 of 22) intron (NM_001348462, intron 20 of 22) 49067 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr17-3942 chr17 61168710 61168920 + 9.54 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 198889 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr2-14821 chr2 241406489 241406699 + 9.54 0.000 intron (NM_014808, intron 4 of 26) AluJb|SINE|Alu 50309 NM_001282983 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr13-1598 chr13 43444274 43444484 + 9.54 0.000 intron (NM_001347968, intron 3 of 17) intron (NM_001347968, intron 3 of 17) -4473 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr17-4236 chr17 45052168 45052378 + 9.54 0.000 promoter-TSS (NM_001128631) promoter-TSS (NM_001128631) -641 NM_001128631 79877 Hs.463148 NM_024819 ENSG00000172992 DCAKD - dephospho-CoA kinase domain containing protein-coding chr5-3605 chr5 113708523 113708733 + 9.54 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 194934 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr9-4939 chr9 14246012 14246222 + 9.54 0.000 intron (NR_161383, intron 1 of 7) intron (NR_161383, intron 1 of 7) 54147 NM_001369479 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr3-5302 chr3 126348822 126349032 + 9.54 0.000 intron (NM_014079, intron 2 of 2) intron (NM_014079, intron 2 of 2) 8481 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr2-6864 chr2 74827272 74827482 + 9.54 0.000 Intergenic MIRc|SINE|MIR -5278 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr1-7858 chr1 92858997 92859207 + 9.54 0.000 intron (NM_001252269, intron 1 of 3) intron (NM_001252269, intron 1 of 3) 18048 NM_001252271 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr15-2866 chr15 41853119 41853329 + 9.54 0.000 intron (NM_016642, intron 59 of 67) intron (NM_016642, intron 59 of 67) 13327 NR_036195 100423013 NR_036195 ENSG00000264850 MIR4310 - microRNA 4310 ncRNA chr11-4891 chr11 47505394 47505604 + 9.54 0.000 intron (NM_001330272, intron 1 of 15) AluY|SINE|Alu -10978 NM_198700 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr3-10199 chr3 120391403 120391613 + 9.54 0.000 TTS (NM_007085) TTS (NM_007085) 4221 NR_029584 406975 NR_029584 ENSG00000284121 MIR198 MIRN198|miR-198 microRNA 198 ncRNA chr11-5808 chr11 6576701 6576911 + 9.54 0.000 Intergenic Intergenic 26810 NM_015324 23378 Hs.652255 NM_015324 ENSG00000132275 RRP8 KIAA0409|NML ribosomal RNA processing 8 protein-coding chr2-9622 chr2 8399074 8399284 + 9.54 0.000 Intergenic Intergenic -70760 NR_152741 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr12-6513 chr12 108423782 108423992 + 9.54 0.000 Intergenic AluSx|SINE|Alu 49802 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr3-3930 chr3 49626352 49626562 + 9.54 0.000 intron (NM_003458, intron 2 of 11) intron (NM_003458, intron 2 of 11) -47894 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr2-3485 chr2 188512483 188512693 + 9.54 0.000 intron (NM_001252669, intron 4 of 8) intron (NM_001252669, intron 4 of 8) 215096 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr22-3284 chr22 47171079 47171289 + 9.54 0.000 intron (NM_001284305, intron 12 of 12) intron (NM_001284305, intron 12 of 12) -174387 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr6-6299 chr6 41721717 41721927 + 9.54 0.000 intron (NM_001167827, intron 1 of 8) MIR|SINE|MIR 11788 NR_162107 113218489 NR_162107 MIR10398 - microRNA 10398 ncRNA chr1-4582 chr1 98048354 98048564 + 9.54 0.000 intron (NR_046105, intron 1 of 4) intron (NR_046105, intron 1 of 4) 1234 NR_046105 400765 Hs.451802 NM_001001688 ENSG00000225206 MIR137HG - MIR137 host gene ncRNA chr16-2817 chr16 68401758 68401968 + 9.54 0.000 intron (NM_018667, intron 1 of 8) MLT2E|LTR|ERVL 46645 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr1-5596 chr1 8813138 8813348 + 9.54 0.000 intron (NM_012102, intron 1 of 23) intron (NM_012102, intron 1 of 23) 4397 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr6-7521 chr6 66779413 66779623 + 9.54 0.000 Intergenic LTR12D|LTR|ERV1 991639 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr10-6594 chr10 84079249 84079459 + 9.54 0.000 Intergenic AluJr|SINE|Alu -60155 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chrX-451 chrX 111043173 111043383 + 9.54 0.000 intron (NM_001128166, intron 2 of 15) AluJo|SINE|Alu -52913 NM_001324326 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr6-2611 chr6 125858803 125859013 + 9.54 0.000 intron (NM_181782, intron 3 of 15) intron (NM_181782, intron 3 of 15) -40050 NR_126386 104355145 Hs.590370 NR_126386 ENSG00000232131 NCOA7-AS1 - NCOA7 antisense RNA 1 ncRNA chr4-3506 chr4 145807005 145807215 + 9.54 0.000 intron (NM_178835, intron 8 of 14) intron (NM_178835, intron 8 of 14) 126906 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr4-6084 chr4 8642917 8643127 + 9.54 0.000 Intergenic L2c|LINE|L2 50257 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr3-4599 chr3 194700141 194700351 + 9.54 0.000 Intergenic L3|LINE|CR1 -8175 NR_037891 100507391 Hs.590099 NR_037891 ENSG00000237222 LINC01968 - long intergenic non-protein coding RNA 1968 ncRNA chr7-3719 chr7 66073444 66073654 + 9.54 0.000 Intergenic Intergenic -2270 NM_001024944 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr17-4696 chr17 28879514 28879724 + 9.54 0.000 3' UTR (NM_001330170, exon 11 of 11) 3' UTR (NM_001330170, exon 11 of 11) -17889 NR_039885 100616385 NR_039885 ENSG00000284085 MIR4732 mir-4732 microRNA 4732 ncRNA chr4-7380 chr4 61149369 61149579 + 9.54 0.000 intron (NR_147148, intron 3 of 3) intron (NR_147148, intron 3 of 3) 5818 NR_147148 105377249 Hs.575120 NR_147148 ENSG00000240152 LINC02271 - long intergenic non-protein coding RNA 2271 ncRNA chr18-1411 chr18 2847632 2847842 + 9.54 0.000 intron (NM_032048, intron 1 of 7) CpG 731 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chrX-2021 chrX 16011148 16011358 + 9.54 0.000 Intergenic LTR6B|LTR|ERV1 -112312 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr9-3488 chr9 15264985 15265195 + 9.54 0.000 intron (NM_001168340, intron 2 of 18) intron (NM_001168340, intron 2 of 18) -14872 NM_001168342 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr10-3547 chr10 76758067 76758277 + 9.54 0.000 Intergenic Intergenic -129872 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr11-3715 chr11 13116419 13116629 + 9.54 0.000 Intergenic L2b|LINE|L2 107208 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr2-6250 chr2 40716868 40717078 + 9.54 0.000 Intergenic MLT2B3|LTR|ERVL -204538 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr11-2626 chr11 12150751 12150961 + 9.54 0.000 intron (NR_144417, intron 2 of 26) intron (NR_144417, intron 2 of 26) -11223 NM_001282666 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr3-5206 chr3 76048969 76049179 + 9.54 0.000 Intergenic L1ME3E|LINE|L1 -263525 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr3-4951 chr3 10484366 10484576 + 9.54 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) 21113 NM_001363862 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr4-5288 chr4 176286741 176286951 + 9.54 0.000 Intergenic HERVL40-int|LTR|ERVL -17624 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chr18-683 chr18 76341621 76341831 + 9.54 0.000 Intergenic L2c|LINE|L2 132216 NR_146507 105372207 Hs.303880 NR_146507 LINC01893 - long intergenic non-protein coding RNA 1893 ncRNA chr1-4293 chr1 20721157 20721367 + 9.54 0.000 3' UTR (NM_001103160, exon 9 of 9) 3' UTR (NM_001103160, exon 9 of 9) -3255 NM_001122819 57576 Hs.130411 NM_020816 ENSG00000117245 KIF17 KIF17B|KIF3X|KLP-2|OSM-3 kinesin family member 17 protein-coding chr20-3046 chr20 1052985 1053195 + 9.54 0.000 Intergenic Intergenic -50779 NM_001040007 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding chr5-5321 chr5 127769674 127769884 + 9.54 0.000 intron (NM_001317938, intron 3 of 6) L2|LINE|L2 66390 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr2-12552 chr2 68400266 68400476 + 9.54 0.000 Intergenic L1PA7|LINE|L1 35089 NM_002664 5341 Hs.468840 NM_002664 ENSG00000115956 PLEK P47 pleckstrin protein-coding chr19-3164 chr19 39085736 39085946 + 9.54 0.000 intron (NM_001363687, intron 2 of 10) intron (NM_001363687, intron 2 of 10) 1473 NM_001363687 390928 Hs.448934 NM_001004318 ENSG00000183760 ACP7 PAPL|PAPL1 acid phosphatase 7, tartrate resistant (putative) protein-coding chr6-6742 chr6 2596109 2596319 + 9.54 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -38286 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr13-3365 chr13 78222336 78222546 + 9.54 0.000 intron (NR_047001, intron 2 of 5) MLT1F2|LTR|ERVL-MaLR 167586 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr15-481 chr15 99565452 99565662 + 9.54 0.000 promoter-TSS (NM_001352616) promoter-TSS (NM_001352616) 140 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr5-7143 chr5 2356086 2356296 + 9.54 0.000 Intergenic Intergenic -43990 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr4-4450 chr4 53937855 53938065 + 9.54 0.000 Intergenic Intergenic 49322 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr1-3694 chr1 182948206 182948416 + 9.54 0.000 intron (NM_030933, intron 2 of 9) MLT1D|LTR|ERVL-MaLR 4855 NM_001345928 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr2-3762 chr2 8547458 8547668 + 9.54 0.000 Intergenic L2b|LINE|L2 36229 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr3-2674 chr3 46664217 46664427 + 9.54 0.000 Intergenic Intergenic 29357 NM_147129 259173 Hs.517937 NM_147129 ENSG00000178038 ALS2CL RN49018 ALS2 C-terminal like protein-coding chr14-5094 chr14 86956055 86956265 + 9.54 0.000 Intergenic ERVL-E-int|LTR|ERVL 50382 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr15-1847 chr15 51229973 51230183 + 9.54 0.000 intron (NM_001347252, intron 3 of 9) intron (NM_001347252, intron 3 of 9) -12112 NR_039863 100616369 NR_039863 ENSG00000266593 MIR4713 - microRNA 4713 ncRNA chr20-1301 chr20 57125515 57125725 + 9.54 0.000 Intergenic LTR16|LTR|ERVL -88076 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr9-4047 chr9 97412521 97412731 + 9.54 0.000 intron (NM_001302884, intron 1 of 15) CpG 530 NM_014290 23424 Hs.193842 NM_014290 ENSG00000196116 TDRD7 CATC4|PCTAIRE2BP|TRAP tudor domain containing 7 protein-coding chr18-1076 chr18 37546545 37546755 + 9.54 0.000 intron (NM_001353701, intron 1 of 1) intron (NM_001353701, intron 1 of 1) 19148 NM_001353752 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr5-3974 chr5 11608028 11608238 + 9.54 0.000 intron (NM_001288717, intron 2 of 20) intron (NM_001288717, intron 2 of 20) -19067 NM_001364128 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr1-4797 chr1 19204598 19204808 + 9.54 0.000 intron (NM_020765, intron 1 of 105) intron (NM_020765, intron 1 of 105) 5563 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr15-3900 chr15 17036700 17036910 + 9.54 0.000 Intergenic ALR/Alpha|Satellite|centr -3245939 NR_038836 646096 Hs.448789 NR_038836 ENSG00000259156 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo chr13-3665 chr13 33345829 33346039 + 9.54 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -10668 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr1-7339 chr1 8501739 8501949 + 9.54 0.000 intron (NM_001042681, intron 8 of 22) SVA_E|Retroposon|SVA -6931 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr13-3392 chr13 90856426 90856636 + 9.54 0.000 Intergenic Intergenic 70066 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr1-9904 chr1 70767324 70767534 + 9.54 0.000 intron (NR_125938, intron 5 of 6) MER66-int|LTR|ERV1 60976 NR_125938 101927244 Hs.568660 NR_125938 ENSG00000229051 LINC01788 - long intergenic non-protein coding RNA 1788 ncRNA chr12-1957 chr12 113193941 113194151 + 9.54 0.000 Intergenic AluSz6|SINE|Alu 8325 NM_032848 84934 Hs.524762 NM_032848 ENSG00000139405 RITA1 C12orf52|RITA RBPJ interacting and tubulin associated 1 protein-coding chr8-5071 chr8 36880834 36881044 + 9.54 0.000 intron (NM_001031836, intron 19 of 26) intron (NM_001031836, intron 19 of 26) 96565 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr2-9336 chr2 225563227 225563437 + 9.54 0.000 intron (NM_001371273, intron 4 of 7) L2b|LINE|L2 162446 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr22-2755 chr22 40088185 40088395 + 9.54 0.000 intron (NM_001024843, intron 1 of 23) MIRc|SINE|MIR 43473 NM_001024843 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr7-1705 chr7 1259931 1260141 + 9.54 0.000 Intergenic Intergenic 27164 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr20-1460 chr20 63747680 63747890 + 9.54 0.000 intron (NM_001369741, intron 4 of 4) intron (NM_001369741, intron 4 of 4) 8009 NM_020062 56731 Hs.435126 NM_020062 ENSG00000125520 SLC2A4RG GEF|HDBP-1|HDBP1|Si-1-2|Si-1-2-19 SLC2A4 regulator protein-coding chr15-2335 chr15 99614748 99614958 + 9.54 0.000 intron (NM_001352615, intron 3 of 12) L2c|LINE|L2 -18125 NM_001130928 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr16-2192 chr16 74724805 74725015 + 9.54 0.000 intron (NM_024306, intron 4 of 6) intron (NM_024306, intron 4 of 6) -24048 NM_001142497 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr10-8457 chr10 86918144 86918354 + 9.54 0.000 intron (NM_004329, intron 9 of 12) MLT1C|LTR|ERVL-MaLR -37510 NM_001330120 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chr8-2282 chr8 102774314 102774524 + 9.54 0.000 Intergenic LTR33|LTR|ERVL -32403 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr16-4580 chr16 67444252 67444462 + 9.54 0.000 intron (NM_004691, intron 3 of 7) intron (NM_004691, intron 3 of 7) 13236 NM_000196 3291 Hs.1376 NM_000196 ENSG00000176387 HSD11B2 AME|AME1|HSD11K|HSD2|SDR9C3 hydroxysteroid 11-beta dehydrogenase 2 protein-coding chr22-1222 chr22 38771719 38771929 + 9.54 0.000 Intergenic Intergenic -15826 NM_015374 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr3-4074 chr3 99344207 99344417 + 9.54 0.000 Intergenic Intergenic -294282 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr20-1244 chr20 35972309 35972519 + 9.54 0.000 intron (NM_001304367, intron 1 of 1) MER63B|DNA|hAT-Blackjack 3824 NM_080834 140894 Hs.732697 NM_080834 ENSG00000149646 CNBD2 C20orf152|CNMPD1 cyclic nucleotide binding domain containing 2 protein-coding chr3-3428 chr3 123642423 123642633 + 9.54 0.000 intron (NM_001321309, intron 26 of 32) intron (NM_001321309, intron 26 of 32) -21980 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr6-3634 chr6 127579439 127579649 + 9.54 0.000 intron (NM_001010905, intron 2 of 5) intron (NM_001010905, intron 2 of 5) 2370 NM_001010905 352999 Hs.226268 NM_001010905 ENSG00000184530 C6orf58 LEG1 chromosome 6 open reading frame 58 protein-coding chr1-10745 chr1 198828448 198828658 + 9.54 0.000 intron (NR_040073, intron 2 of 2) HUERS-P2-int|LTR|ERV1 30429 NR_029612 406955 NR_029612 ENSG00000207975 MIR181B1 MIRN181B1|mir-181b-1 microRNA 181b-1 ncRNA chr7-8881 chr7 91407753 91407963 + 9.54 0.000 Intergenic Intergenic 143425 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr3-3131 chr3 155963888 155964098 + 9.54 0.000 Intergenic Intergenic 93343 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr9-2381 chr9 125829625 125829835 + 9.54 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 81547 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr10-4326 chr10 24630842 24631052 + 9.54 0.000 intron (NM_001367447, intron 6 of 24) intron (NM_001367447, intron 6 of 24) -8104 NM_001367455 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr12-3374 chr12 98864847 98865057 + 9.54 0.000 intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) 29822 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr5-3103 chr5 45171933 45172143 + 9.54 0.000 Intergenic Intergenic 363091 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr22-2253 chr22 29454252 29454462 + 9.54 0.000 Intergenic Intergenic -12228 NR_002727 10740 Hs.167750 NR_002727 RFPL1S NCRNA00006|RFPL1-AS|RFPL1-AS1|RFPL1AS RFPL1 antisense RNA 1 ncRNA chr13-921 chr13 66618764 66618974 + 9.54 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) -206300 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr2-13078 chr2 111023134 111023344 + 9.54 0.000 intron (NM_001371254, intron 15 of 18) intron (NM_001371254, intron 15 of 18) 92349 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr11-4084 chr11 28400495 28400705 + 9.54 0.000 Intergenic Intergenic 76948 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr10-5898 chr10 118459693 118459903 + 9.54 0.000 Intergenic Intergenic 102690 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr2-8824 chr2 170599149 170599359 + 9.54 0.000 intron (NM_001083615, intron 31 of 33) intron (NM_001083615, intron 31 of 33) 115313 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr2-13584 chr2 156918789 156918999 + 9.54 0.000 Intergenic L1ME1|LINE|L1 -338811 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr1-14467 chr1 47581148 47581358 + 9.54 0.000 Intergenic MER46C|DNA|TcMar-Tigger -143936 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr17-5214 chr17 16396739 16396949 + 9.54 0.000 Intergenic Intergenic 15379 NM_001281717 7314 Hs.356190 NM_018955 ENSG00000170315 UBB HEL-S-50 ubiquitin B protein-coding chr22-1459 chr22 50049725 50049935 + 9.54 0.000 intron (NM_001350317, intron 4 of 13) intron (NM_001350317, intron 4 of 13) 8397 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr10-4879 chr10 17406488 17406698 + 9.54 0.000 intron (NR_034129, intron 2 of 2) MER34B|LTR|ERV1 19657 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr20-3872 chr20 29326678 29326888 + 9.54 0.000 Intergenic Intergenic 90178 NR_037925 647476 Hs.274541 NR_037925 FRG2EP - FSHD region gene 2 family member E, pseudogene pseudo chr4-7088 chr4 32264399 32264609 + 9.54 0.000 Intergenic Intergenic -86534 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr5-3179 chr5 74327078 74327288 + 9.54 0.000 intron (NR_105010, intron 2 of 2) intron (NR_105010, intron 2 of 2) 4697 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chr1-4408 chr1 201719803 201720013 + 9.54 0.000 TTS (NR_049823) TTS (NR_049823) 400 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chr9-5466 chr9 98923071 98923281 + 9.54 0.000 Intergenic Intergenic -20731 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr3-4660 chr3 38976488 38976698 + 9.54 0.000 intron (NM_001349253, intron 2 of 29) Tigger4a|DNA|TcMar-Tigger -26032 NM_014139 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr9-1792 chr9 4855949 4856159 + 9.54 0.000 intron (NM_005772, intron 8 of 8) intron (NM_005772, intron 8 of 8) 5757 NR_029836 406894 NR_029836 ENSG00000199065 MIR101-2 MIRN101-2|mir-101-2 microRNA 101-2 ncRNA chr3-3625 chr3 106048943 106049153 + 9.54 0.000 Intergenic Intergenic -179647 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr10-6673 chr10 107733786 107733996 + 9.54 0.000 Intergenic L1MA9|LINE|L1 335402 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr16-6809 chr16 80164076 80164286 + 9.54 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) 368932 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr11-4044 chr11 12376654 12376864 + 9.54 0.000 promoter-TSS (NM_018222) promoter-TSS (NM_018222) -812 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr3-3059 chr3 127480721 127480931 + 9.54 0.000 Intergenic MIR|SINE|MIR 56954 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr17-3172 chr17 76405200 76405410 + 9.54 0.000 exon (NM_022066, exon 3 of 18) exon (NM_022066, exon 3 of 18) 20027 NM_001142602 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr14-3370 chr14 92382887 92383097 + 9.54 0.000 intron (NM_153647, intron 3 of 17) MIRc|SINE|MIR 59184 NM_153646 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr9-7226 chr9 1222542 1222752 + 9.54 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 171160 NR_163472 10655 Hs.59506 NM_006557 ENSG00000173253 DMRT2 - doublesex and mab-3 related transcription factor 2 protein-coding chr20-4405 chr20 58839608 58839818 + 9.54 0.000 promoter-TSS (NM_016592) promoter-TSS (NM_016592) -35 NM_016592 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|PITA3|POH|SCG6|SgVI GNAS complex locus protein-coding chr2-4550 chr2 47630600 47630810 + 9.54 0.000 Intergenic Intergenic -60374 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chrX-1052 chrX 119273612 119273822 + 9.54 0.000 Intergenic Intergenic -17812 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr8-3715 chr8 20123673 20123883 + 9.54 0.000 Intergenic Intergenic 59358 NM_003053 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr18-1000 chr18 35672349 35672559 + 9.54 0.000 intron (NM_020474, intron 2 of 10) intron (NM_020474, intron 2 of 10) 17885 NM_020474 2589 Hs.514806 NM_020474 ENSG00000141429 GALNT1 GALNAC-T1 polypeptide N-acetylgalactosaminyltransferase 1 protein-coding chr9-4928 chr9 13014088 13014298 + 9.54 0.000 Intergenic Intergenic -41560 NR_132976 106635615 NR_132976 SNORD137 - small nucleolar RNA, C/D box 137 snoRNA chr1-9642 chr1 47145977 47146187 + 9.54 0.000 exon (NM_001010969, exon 11 of 12) exon (NM_001010969, exon 11 of 12) 8641 NM_001010969 284541 Hs.726474 NM_001010969 ENSG00000162365 CYP4A22 - cytochrome P450 family 4 subfamily A member 22 protein-coding chr11-9778 chr11 69681443 69681653 + 9.54 0.000 Intergenic AluSq2|SINE|Alu -6195 NM_153451 220064 Hs.667996 NM_153451 ENSG00000149716 LTO1 CIAB1|ORAOV1|TAOS1 LTO1 maturation factor of ABCE1 protein-coding chrX-4569 chrX 70301663 70301873 + 9.54 0.000 intron (NM_012310, intron 5 of 30) intron (NM_012310, intron 5 of 30) 11664 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chr20-1584 chr20 3753103 3753313 + 9.54 0.000 TTS (NM_001039140) TTS (NM_001039140) 14545 NM_001258429 54976 Hs.274422 NM_017874 ENSG00000101220 C20orf27 - chromosome 20 open reading frame 27 protein-coding chrX-1038 chrX 96798877 96799087 + 9.54 0.000 intron (NM_007309, intron 4 of 26) L1MEc|LINE|L1 -84926 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr12-2061 chr12 110023204 110023414 + 9.54 0.000 intron (NM_033121, intron 6 of 14) intron (NM_033121, intron 6 of 14) 23879 NM_033121 88455 Hs.528703 NM_033121 ENSG00000076513 ANKRD13A ANKRD13|NY-REN-25 ankyrin repeat domain 13A protein-coding chr2-1271 chr2 64653829 64654039 + 9.54 0.000 promoter-TSS (NM_014755) promoter-TSS (NM_014755) -21 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr20-809 chr20 35092686 35092896 + 9.54 0.000 promoter-TSS (NM_015638) promoter-TSS (NM_015638) 16 NM_015638 26133 Hs.168073 NM_015638 ENSG00000100991 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel subfamily C member 4 associated protein protein-coding chr6-5402 chr6 155157856 155158066 + 9.54 0.000 intron (NM_012454, intron 6 of 25) intron (NM_012454, intron 6 of 25) -59005 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr16-3433 chr16 88468771 88468981 + 9.54 0.000 promoter-TSS (NR_049821) promoter-TSS (NR_049821) -42 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr21-696 chr21 28207690 28207900 + 9.54 0.000 intron (NR_126012, intron 3 of 5) intron (NR_126012, intron 3 of 5) 20872 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr17-3974 chr17 64748553 64748763 + 9.54 0.000 Intergenic Intergenic -32101 NR_106728 102464831 NR_106728 ENSG00000278581 MIR6080 hsa-mir-6080 microRNA 6080 ncRNA chr1-5177 chr1 170685250 170685460 + 9.54 0.000 intron (NM_022716, intron 1 of 3) intron (NM_022716, intron 1 of 3) 21224 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr9-5872 chr9 131256363 131256573 + 9.54 0.000 Intergenic Intergenic 20042 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr20-2171 chr20 45013069 45013279 + 9.54 0.000 intron (NM_001352385, intron 9 of 11) L1M5|LINE|L1 46662 NR_147974 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding chr13-2631 chr13 77891292 77891502 + 9.54 0.000 intron (NR_103853, intron 6 of 6) HAL1|LINE|L1 27434 NM_001122659 1910 Hs.82002 NM_000115 ENSG00000136160 EDNRB ABCDS|ET-B|ET-BR|ETB|ETB1|ETBR|ETRB|HSCR|HSCR2|WS4A endothelin receptor type B protein-coding chr6-5015 chr6 109854359 109854569 + 9.54 0.000 Intergenic AluSx|SINE|Alu -123792 NM_001286099 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr8-3410 chr8 69242851 69243061 + 9.54 0.000 Intergenic Intergenic -138766 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr9-6836 chr9 40939807 40940017 + 9.54 0.000 Intergenic MIRb|SINE|MIR -10820 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr1-7186 chr1 211736450 211736660 + 9.54 0.000 Intergenic Intergenic 60793 NR_148994 91548 Hs.367839 NR_148994 LOC91548 - uncharacterized LOC91548 ncRNA chr2-10111 chr2 60163742 60163952 + 9.54 0.000 Intergenic MER115|DNA|hAT-Tip100 219189 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr18-2632 chr18 38830517 38830727 + 9.54 0.000 Intergenic Intergenic 791553 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chrX-1184 chrX 55452773 55452983 + 9.54 0.000 exon (NM_014061, exon 1 of 1) exon (NM_014061, exon 1 of 1) 751 NM_014061 28986 Hs.279819 NM_014061 ENSG00000187601 MAGEH1 APR-1|APR1|MAGEH MAGE family member H1 protein-coding chr10-8910 chr10 115208526 115208736 + 9.54 0.000 intron (NM_207303, intron 8 of 28) L1MEc|LINE|L1 115266 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr19-3076 chr19 4363453 4363663 + 9.54 0.000 intron (NM_003025, intron 6 of 9) intron (NM_003025, intron 6 of 9) 20031 NM_001159846 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding chr18-2456 chr18 36006736 36006946 + 9.54 0.000 intron (NM_001303411, intron 7 of 7) intron (NM_001303411, intron 7 of 7) 34162 NM_031446 83608 Hs.37883 NM_031446 ENSG00000141428 C18orf21 HsT3108|PNAS-124|PNAS-131|XTP13 chromosome 18 open reading frame 21 protein-coding chrX-1507 chrX 11396018 11396228 + 9.54 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) 31695 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr1-9415 chr1 32277469 32277679 + 9.54 0.000 intron (NM_001042771, intron 9 of 12) MIR3|SINE|MIR 3463 NM_001042771 3932 Hs.470627 NM_005356 ENSG00000182866 LCK IMD22|LSK|YT16|p56lck|pp58lck LCK proto-oncogene, Src family tyrosine kinase protein-coding chr1-14992 chr1 90826645 90826855 + 9.54 0.000 intron (NR_135038, intron 1 of 2) MLT2B2|LTR|ERVL 9411 NR_147932 105378853 Hs.546492 NR_135038 ENSG00000233593 LINC02609 - long intergenic non-protein coding RNA 2609 ncRNA chr4-8190 chr4 132939891 132940101 + 9.54 0.000 Intergenic L1M2a|LINE|L1 209120 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA chr1-15720 chr1 170586554 170586764 + 9.54 0.000 Intergenic Intergenic -54050 NR_125958 101928650 Hs.676662 NR_125958 GORAB-AS1 - GORAB antisense RNA 1 ncRNA chr1-4377 chr1 154943934 154944144 + 9.54 0.000 TTS (NM_001317734) TTS (NM_001317734) -1381 NM_001323012 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr15-1304 chr15 52179714 52179924 + 9.54 0.000 promoter-TSS (NR_102751) promoter-TSS (NR_102751) 106 NM_006578 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chrX-930 chrX 24936418 24936628 + 9.54 0.000 intron (NM_016937, intron 36 of 36) intron (NM_016937, intron 36 of 36) 79442 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr20-1733 chr20 44433936 44434146 + 9.54 0.000 3' UTR (NM_001030003, exon 10 of 10) 3' UTR (NM_001030003, exon 10 of 10) 16516 NR_109893 101927242 Hs.143307 NR_109893 ENSG00000168746 LINC01430 - long intergenic non-protein coding RNA 1430 ncRNA chr18-1288 chr18 61494075 61494285 + 9.54 0.000 intron (NM_031891, intron 2 of 11) MIRb|SINE|MIR 160750 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr5-4727 chr5 43635648 43635858 + 9.54 0.000 intron (NM_012343, intron 7 of 21) MLT1B|LTR|ERVL-MaLR -32523 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr19-2569 chr19 773161 773371 + 9.54 0.000 Intergenic Intergenic 22154 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr1-6598 chr1 37919301 37919511 + 9.54 0.000 intron (NR_158630, intron 7 of 24) intron (NR_158630, intron 7 of 24) 12333 NM_001350227 3633 Hs.449942 NM_005540 ENSG00000204084 INPP5B 5PTase inositol polyphosphate-5-phosphatase B protein-coding chr12-3908 chr12 124924386 124924596 + 9.54 0.000 Intergenic AluJb|SINE|Alu 8944 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr11-4395 chr11 77322363 77322573 + 9.54 0.000 3' UTR (NM_002576, exon 15 of 15) 3' UTR (NM_002576, exon 15 of 15) -20802 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr10-3000 chr10 97171795 97172005 + 9.54 0.000 intron (NR_037909, intron 11 of 14) L2b|LINE|L2 14059 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr6-2558 chr6 39791429 39791639 + 9.54 0.000 promoter-TSS (NM_001201427) promoter-TSS (NM_001201427) -842 NM_001201427 23500 Hs.357128 NM_015345 ENSG00000146122 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding chr3-2920 chr3 52391977 52392187 + 9.54 0.000 intron (NM_015512, intron 63 of 77) intron (NM_015512, intron 63 of 77) 17926 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr8-5921 chr8 18310930 18311140 + 9.54 0.000 Intergenic L1M8|LINE|L1 -80247 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr3-2449 chr3 49705094 49705304 + 9.54 0.000 intron (NR_135218, intron 23 of 38) intron (NR_135218, intron 23 of 38) 14485 NM_198722 386724 Hs.567903 NM_198722 ENSG00000176020 AMIGO3 ALI3|AMIGO-3 adhesion molecule with Ig like domain 3 protein-coding chr1-7972 chr1 201678653 201678863 + 9.54 0.000 intron (NM_020443, intron 1 of 29) intron (NM_020443, intron 1 of 29) 30436 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr17-8245 chr17 65942879 65943089 + 9.54 0.000 intron (NM_001353129, intron 18 of 26) intron (NM_001353129, intron 18 of 26) -116441 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr13-3234 chr13 29073543 29073753 + 9.54 0.000 intron (NM_001366651, intron 4 of 14) intron (NM_001366651, intron 4 of 14) 49191 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr2-6157 chr2 237765810 237766020 + 9.54 0.000 TTS (NM_001137552) TTS (NM_001137552) -32830 NM_001080504 375316 Hs.607265 NM_198852 ENSG00000177483 RBM44 - RNA binding motif protein 44 protein-coding chr16-6332 chr16 49624934 49625144 + 9.54 0.000 intron (NM_001271620, intron 5 of 7) intron (NM_001271620, intron 5 of 7) 39285 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr20-4098 chr20 40773980 40774190 + 9.54 0.000 Intergenic Intergenic -59462 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr6-6703 chr6 531609 531819 + 9.54 0.000 intron (NM_018303, intron 23 of 27) intron (NM_018303, intron 23 of 27) 125250 NM_148959 135458 Hs.669039 NM_148959 ENSG00000188996 HUS1B - HUS1 checkpoint clamp component B protein-coding chr6-6756 chr6 3083260 3083470 + 9.54 0.000 intron (NM_001354930, intron 5 of 10) L2a|LINE|L2 14871 NM_001354930 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 IMD57|RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr1-4901 chr1 37606187 37606397 + 9.54 0.000 Intergenic Intergenic -10307 NM_001323624 29889 Hs.75528 NM_013285 ENSG00000134697 GNL2 HUMAUANTIG|NGP1|Ngp-1|Nog2|Nug2 G protein nucleolar 2 protein-coding chr22-892 chr22 19273887 19274097 + 9.54 0.000 intron (NM_007098, intron 2 of 32) intron (NM_007098, intron 2 of 32) 17727 NM_001835 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr6-4021 chr6 124651347 124651557 + 9.54 0.000 intron (NM_001300738, intron 4 of 7) MSTD-int|LTR|ERVL-MaLR -311093 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr8-6524 chr8 67174123 67174333 + 9.54 0.000 intron (NM_001363133, intron 22 of 27) intron (NM_001363133, intron 22 of 27) 90380 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr6-3413 chr6 101223466 101223676 + 9.54 0.000 Intergenic L1MA4|LINE|L1 -175414 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr22-1478 chr22 22216309 22216519 + 9.54 0.000 Intergenic Intergenic -28372 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr12-3268 chr12 68094633 68094843 + 9.54 0.000 Intergenic Intergenic 65002 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr9-4688 chr9 124542061 124542271 + 9.54 0.000 intron (NM_001278546, intron 4 of 9) L1MB1|LINE|L1 -34767 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr1-7301 chr1 244815591 244815801 + 9.54 0.000 Intergenic MER41A|LTR|ERV1 -19610 NM_001312871 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr7-3850 chr7 101606964 101607174 + 9.54 0.000 Intergenic MLT2A2|LTR|ERVL 22227 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chrX-1082 chrX 141176764 141176974 + 9.54 0.000 exon (NM_012317, exon 1 of 1) exon (NM_012317, exon 1 of 1) 260 NM_012317 23641 Hs.45231 NM_012317 ENSG00000182195 LDOC1 BCUR1|Mar7|Mart7|RTL7|SIRH7 LDOC1 regulator of NFKB signaling protein-coding chr9-5036 chr9 28809763 28809973 + 9.54 0.000 intron (NM_001354574, intron 2 of 5) L2a|LINE|L2 53838 NR_030597 100126310 NR_030597 ENSG00000215966 MIR876 MIRN876|hsa-mir-876|mir-876 microRNA 876 ncRNA chr19-1275 chr19 19361439 19361649 + 9.54 0.000 Intergenic AluJb|SINE|Alu -24259 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr2-12864 chr2 96870900 96871110 + 9.54 0.000 promoter-TSS (NM_017789) promoter-TSS (NM_017789) -925 NM_017789 54910 Hs.516220 NM_017789 ENSG00000168758 SEMA4C M-SEMA-F|SEMACL1|SEMAF|SEMAI semaphorin 4C protein-coding chr3-4859 chr3 160413609 160413819 + 9.54 0.000 intron (NM_001002800, intron 8 of 23) intron (NM_001002800, intron 8 of 23) 8969 NR_029525 406951 NR_029525 ENSG00000198987 MIR16-2 MIRN16-2|mir-16-2|mir-16-3 microRNA 16-2 ncRNA chr11-4496 chr11 112656999 112657209 + 9.54 0.000 Intergenic Intergenic -101302 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr6-3242 chr6 144845640 144845850 + 9.54 0.000 intron (NM_007124, intron 72 of 73) intron (NM_007124, intron 72 of 73) 440090 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr18-3245 chr18 48991907 48992117 + 9.54 0.000 Intergenic Intergenic -31691 NR_148999 100129878 Hs.437704 NR_148999 ENSG00000264269 LOC100129878 - uncharacterized LOC100129878 ncRNA chr12-2921 chr12 66448765 66448975 + 9.54 0.000 intron (NM_001366722, intron 11 of 24) L2c|LINE|L2 146325 NR_135080 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr1-5866 chr1 2121346 2121556 + 9.54 0.000 intron (NM_001033582, intron 1 of 14) intron (NM_001033582, intron 1 of 14) 16735 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr4-5227 chr4 168615325 168615535 + 9.54 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) -16148 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr3-10922 chr3 173081219 173081429 + 9.54 0.000 intron (NM_031955, intron 2 of 10) intron (NM_031955, intron 2 of 10) 59911 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr3-3615 chr3 96756743 96756953 + 9.54 0.000 Intergenic Intergenic -57746 NM_001080448 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr16-4510 chr16 58313481 58313691 + 9.54 0.000 Intergenic MER4B-int|LTR|ERV1 -18539 NM_001080492 221191 Hs.411239 NM_001080492 ENSG00000103023 PRSS54 CT67|KLKBL4 serine protease 54 protein-coding chr19-2511 chr19 15452344 15452554 + 9.54 0.000 intron (NM_022904, intron 16 of 17) intron (NM_022904, intron 16 of 17) -2493 NM_021241 58525 Hs.442138 NM_021241 ENSG00000011451 WIZ ZNF803 WIZ zinc finger protein-coding chr19-3620 chr19 57814195 57814405 + 9.54 0.000 intron (NM_024762, intron 1 of 2) intron (NM_024762, intron 1 of 2) 613 NM_024762 79818 Hs.560727 NM_024762 ENSG00000178935 ZNF552 - zinc finger protein 552 protein-coding chr10-8319 chr10 78703783 78703993 + 9.54 0.000 Intergenic Intergenic 363560 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr8-3148 chr8 75947060 75947270 + 9.54 0.000 Intergenic Intergenic 407197 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr17-3247 chr17 28426247 28426457 + 9.54 0.000 Intergenic Intergenic -20140 NM_080669 113235 Hs.446689 NM_080669 ENSG00000076351 SLC46A1 G21|HCP1|PCFT solute carrier family 46 member 1 protein-coding chr1-6969 chr1 161041547 161041757 + 9.54 0.000 exon (NM_207005, exon 6 of 11) exon (NM_207005, exon 6 of 11) -2688 NM_001113207 100131187 Hs.720030 NM_001113205 ENSG00000215845 TSTD1 KAT|TST thiosulfate sulfurtransferase like domain containing 1 protein-coding chr2-2898 chr2 219965580 219965790 + 9.54 0.000 Intergenic Intergenic -59120 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr18-3436 chr18 64789683 64789893 + 9.54 0.000 Intergenic Intergenic -529733 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr16-4998 chr16 21032169 21032379 + 9.54 0.000 intron (NM_001347886, intron 36 of 61) intron (NM_001347886, intron 36 of 61) 118572 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr3-9977 chr3 98064922 98065132 + 9.54 0.000 Intergenic Intergenic -22146 NM_054106 81050 Hs.554715 NM_054106 ENSG00000196578 OR5AC2 HSA1 olfactory receptor family 5 subfamily AC member 2 protein-coding chr7-5080 chr7 2265858 2266068 + 9.54 0.000 intron (NM_013321, intron 5 of 10) AluJr|SINE|Alu -8386 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr6-7475 chr6 57702975 57703185 + 9.54 0.000 Intergenic L1PA4|LINE|L1 233849 NR_133000 375513 Hs.561539 NM_206908 GUSBP4 C6orf216|GUSBL2|SMA3-L|SMAC3L GUSB pseudogene 4 pseudo chr15-1876 chr15 65009135 65009345 + 9.54 0.000 intron (NM_139242, intron 6 of 8) intron (NM_139242, intron 6 of 8) -19326 NM_016630 51324 Hs.242458 NM_016630 ENSG00000090487 SPG21 ABHD21|ACP33|BM-019|GL010|MAST SPG21 abhydrolase domain containing, maspardin protein-coding chr21-710 chr21 32739196 32739406 + 9.54 0.000 intron (NR_038879, intron 3 of 3) MIR|SINE|MIR 11187 NR_038879 100506215 Hs.657123 NR_038879 ENSG00000238197 PAXBP1-AS1 GCFC1-AS1 PAXBP1 antisense RNA 1 ncRNA chr1-9901 chr1 70162719 70162929 + 9.54 0.000 intron (NM_017768, intron 9 of 14) intron (NM_017768, intron 9 of 14) 42755 NM_017768 55631 Hs.147836 NM_017768 ENSG00000066557 LRRC40 dJ677H15.1 leucine rich repeat containing 40 protein-coding chr14-2471 chr14 90465641 90465851 + 9.54 0.000 Intergenic THE1C|LTR|ERVL-MaLR 10516 NR_033986 400238 Hs.131037 NR_033986 ENSG00000233208 LINC00642 - long intergenic non-protein coding RNA 642 ncRNA chr2-14680 chr2 237313785 237313995 + 9.54 0.000 Intergenic Intergenic 100274 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr3-2861 chr3 39180686 39180896 + 9.54 0.000 Intergenic CpG 11804 NM_194293 165904 Hs.447868 NM_194293 ENSG00000168334 XIRP1 CMYA1|Xin xin actin binding repeat containing 1 protein-coding chr7-6756 chr7 11545900 11546110 + 9.54 0.000 intron (NM_015204, intron 4 of 26) L1PA15|LINE|L1 286193 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chrX-550 chrX 15749755 15749965 + 9.54 0.000 intron (NM_007220, intron 1 of 7) intron (NM_007220, intron 1 of 7) 11590 NM_007220 11238 Hs.653287 NM_007220 ENSG00000169239 CA5B CA-VB|CAVB carbonic anhydrase 5B protein-coding chr5-5619 chr5 154118976 154119186 + 9.54 0.000 Intergenic Intergenic -71652 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr4-6548 chr4 178924319 178924529 + 9.54 0.000 Intergenic AluSx1|SINE|Alu -1016488 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr6-3912 chr6 71913732 71913942 + 9.54 0.000 intron (NM_001350412, intron 1 of 2) intron (NM_001350412, intron 1 of 2) 27134 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr14-2148 chr14 88423035 88423245 + 9.54 0.000 intron (NM_001040428, intron 4 of 10) intron (NM_001040428, intron 4 of 10) 37483 NM_018418 55812 Hs.525518 NM_018418 ENSG00000042317 SPATA7 HEL-S-296|HSD-3.1|HSD3|LCA3 spermatogenesis associated 7 protein-coding chr2-5068 chr2 8545042 8545252 + 9.54 0.000 Intergenic Intergenic 38645 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr6-2491 chr6 99589131 99589341 + 9.54 0.000 Intergenic CpG -17538 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr8-3052 chr8 144971338 144971548 + 9.54 0.000 Intergenic ERVL-E-int|LTR|ERVL -20563 NM_006958 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding chr9-6342 chr9 11575311 11575521 + 9.54 0.000 Intergenic MER94|DNA|hAT-Blackjack 962210 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr1-10191 chr1 111946371 111946581 + 9.54 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) 36819 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr16-6688 chr16 70153774 70153984 + 9.54 0.000 intron (NM_001322119, intron 16 of 16) AluSx1|SINE|Alu 19569 NR_126007 400541 Hs.461183 NR_126007 ENSG00000247228 LOC400541 - uncharacterized LOC400541 ncRNA chr2-8121 chr2 79860696 79860906 + 9.54 0.000 intron (NM_001282598, intron 4 of 17) intron (NM_001282598, intron 4 of 17) 5782 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr12-748 chr12 23949596 23949806 + 9.54 0.000 promoter-TSS (NM_001330785) promoter-TSS (NM_001330785) -31 NM_006940 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr2-6051 chr2 127218702 127218912 + 9.54 0.000 intron (NM_001367502, intron 1 of 8) intron (NM_001367502, intron 1 of 8) 1492 NM_001367502 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr20-2486 chr20 32959416 32959626 + 9.54 0.000 intron (NM_001143967, intron 24 of 26) intron (NM_001143967, intron 24 of 26) 44912 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr1-13328 chr1 242893683 242893893 + 9.54 0.000 Intergenic AluSx|SINE|Alu 207956 NR_029401 731275 Hs.722350 NR_029401 ENSG00000214837 LINC01347 - long intergenic non-protein coding RNA 1347 ncRNA chr4-7651 chr4 84780956 84781166 + 9.54 0.000 intron (NM_014991, intron 25 of 67) intron (NM_014991, intron 25 of 67) -184555 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr2-13824 chr2 175794282 175794492 + 9.54 0.000 Intergenic MER58C|DNA|hAT-Charlie 207880 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr14-1631 chr14 103846762 103846972 + 9.54 0.000 promoter-TSS (NR_038436) promoter-TSS (NR_038436) 708 NM_015316 23368 Hs.709297 NM_015316 ENSG00000088808 PPP1R13B ASPP1|p53BP2-like|p85 protein phosphatase 1 regulatory subunit 13B protein-coding chr2-11142 chr2 141554999 141555209 + 9.54 0.000 intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 576597 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr1-12183 chr1 197367734 197367944 + 9.54 0.000 intron (NM_001193640, intron 3 of 9) intron (NM_001193640, intron 3 of 9) 99587 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr15-3496 chr15 98402749 98402959 + 9.54 0.000 intron (NR_146567, intron 1 of 2) MLT1B|LTR|ERVL-MaLR 18144 NR_146567 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chr4-1847 chr4 138911040 138911250 + 9.54 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 101501 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr4-4462 chr4 54879790 54880000 + 9.54 0.000 Intergenic Intergenic 221967 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr11-6817 chr11 94034845 94035055 + 9.54 0.000 intron (NM_001098672, intron 1 of 19) intron (NM_001098672, intron 1 of 19) 13596 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chr5-3307 chr5 123454518 123454728 + 9.54 0.000 Intergenic Intergenic -31031 NM_001166226 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr22-2477 chr22 20898767 20898977 + 9.54 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -18535 NR_156180 1399 Hs.5613 NM_005207 ENSG00000099942 CRKL - CRK like proto-oncogene, adaptor protein protein-coding chr19-3721 chr19 42373890 42374100 + 9.54 0.000 intron (NM_001271938, intron 41 of 41) AluJo|SINE|Alu 16302 NM_032488 84518 Hs.148590 NM_032488 ENSG00000105427 CNFN PLAC8L2 cornifelin protein-coding chr4-1549 chr4 185210673 185210883 + 9.54 0.000 intron (NM_001317781, intron 1 of 18) intron (NM_001317781, intron 1 of 18) 6541 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr16-3002 chr16 28976496 28976706 + 9.54 0.000 intron (NM_032038, intron 2 of 11) MIRb|SINE|MIR 1823 NM_032038 83985 Hs.617449 NM_032038 ENSG00000169682 SPNS1 HSpin1|LAT|PP2030|SLC62A1|SPIN1|SPINL|nrs sphingolipid transporter 1 (putative) protein-coding chr7-7042 chr7 137873512 137873722 + 9.54 0.000 Intergenic MER74A|LTR|ERVL -26753 NM_001321708 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr17-1758 chr17 17496901 17497111 + 9.54 0.000 promoter-TSS (NM_001199989) promoter-TSS (NM_001199989) -611 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr6-5700 chr6 129184716 129184926 + 9.54 0.000 intron (NM_000426, intron 10 of 64) MER31B|LTR|ERV1 301680 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr2-3015 chr2 54965030 54965240 + 9.54 0.000 intron (NM_001039753, intron 37 of 40) intron (NM_001039753, intron 37 of 40) 45137 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr19-5448 chr19 31110442 31110652 + 9.54 0.000 Intergenic Intergenic -56963 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr2-13201 chr2 121483192 121483402 + 9.54 0.000 intron (NM_015282, intron 8 of 38) intron (NM_015282, intron 8 of 38) -47583 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr13-1230 chr13 84482041 84482251 + 9.54 0.000 intron (NR_046871, intron 3 of 6) intron (NR_046871, intron 3 of 6) -301508 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr8-1830 chr8 130443926 130444136 + 9.54 0.000 promoter-TSS (NM_001362926) promoter-TSS (NM_001362926) -357 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr2-6457 chr2 159115883 159116093 + 9.54 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -70847 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chrX-1279 chrX 110341664 110341874 + 9.54 0.000 intron (NM_001171689, intron 2 of 7) Tigger7|DNA|TcMar-Tigger -23684 NM_015365 9949 Hs.656243 NM_015365 ENSG00000101935 AMMECR1 AMMERC1|MFHIEN Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding chr19-5662 chr19 7621437 7621647 + 9.54 0.000 intron (NM_020196, intron 12 of 18) intron (NM_020196, intron 12 of 18) 4103 NR_106850 102465475 NR_106850 ENSG00000273657 MIR6792 hsa-mir-6792 microRNA 6792 ncRNA chr19-4259 chr19 56911015 56911225 + 9.54 0.000 Intergenic Intergenic 70218 NR_024059 100073347 Hs.467337 NR_024059 ENSG00000268654 MIMT1 LINC00067|MIM1|NCRNA00067 MER1 repeat containing imprinted transcript 1 ncRNA chr5-4174 chr5 106241529 106241739 + 9.54 0.000 Intergenic LTR40b|LTR|ERVL 769380 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr2-2739 chr2 158883523 158883733 + 9.54 0.000 Intergenic HERVE-int|LTR|ERV1 -85006 NM_001350064 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr5-6664 chr5 56448296 56448506 + 9.54 0.000 Intergenic L2a|LINE|L2 33368 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr18-1442 chr18 28163283 28163493 + 9.54 0.000 intron (NM_001792, intron 1 of 15) MER5A|DNA|hAT-Charlie 13742 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-6288 chr2 55843162 55843372 + 9.54 0.000 Intergenic Intergenic 80515 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chr18-1938 chr18 35438804 35439014 + 9.54 0.000 Intergenic Intergenic 58699 NM_001308064 125476 Hs.464903 NM_194281 ENSG00000153391 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding chr8-1571 chr8 127341848 127342058 + 9.54 0.000 intron (NR_117099, intron 3 of 3) L2a|LINE|L2 -58446 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA chr3-8789 chr3 5314043 5314253 + 9.54 0.000 Intergenic L3|LINE|CR1 -63893 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr7-8898 chr7 92835829 92836039 + 9.54 0.000 promoter-TSS (NR_110086) promoter-TSS (NR_110086) -549 NR_110087 101927497 Hs.453788 NR_110086 ENSG00000237819 LOC101927497 - uncharacterized LOC101927497 ncRNA chr13-3932 chr13 59459649 59459859 + 9.54 0.000 Intergenic MLT2F|LTR|ERVL -552964 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr7-3257 chr7 5233587 5233797 + 9.54 0.000 3' UTR (NM_001033518, exon 13 of 13) 3' UTR (NM_001033518, exon 13 of 13) 19423 NM_001033520 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr12-3409 chr12 106917576 106917786 + 9.54 0.000 Intergenic Intergenic -38041 NM_001319666 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr3-3051 chr3 126148047 126148257 + 9.54 0.000 intron (NR_072979, intron 8 of 20) intron (NR_072979, intron 8 of 20) -31913 NR_046383 100862662 Hs.633362 NR_046383 ENSG00000246022 ALDH1L1-AS2 - ALDH1L1 antisense RNA 2 ncRNA chr11-7648 chr11 63417305 63417515 + 9.54 0.000 Intergenic L1M3a|LINE|L1 47625 NM_080866 114571 Hs.502772 NM_080866 ENSG00000149742 SLC22A9 HOAT4|OAT4|OAT7|UST3H|ust3 solute carrier family 22 member 9 protein-coding chr7-2968 chr7 1648031 1648241 + 9.54 0.000 Intergenic Intergenic 33666 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr10-7799 chr10 37165016 37165226 + 9.54 0.000 exon (NM_052997, exon 18 of 36) exon (NM_052997, exon 18 of 36) 39264 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr9-6123 chr9 19050193 19050403 + 9.54 0.000 promoter-TSS (NM_001287049) promoter-TSS (NM_001287049) 871 NM_006570 10670 Hs.743260 NM_006570 ENSG00000155876 RRAGA FIP-1|FIP1|RAGA Ras related GTP binding A protein-coding chr7-5819 chr7 83599458 83599668 + 9.54 0.000 intron (NM_012431, intron 1 of 16) intron (NM_012431, intron 1 of 16) 41868 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr7-6406 chr7 155015125 155015335 + 9.54 0.000 Intergenic Intergenic 11797 NR_028090 202781 Hs.193172 NR_028090 ENSG00000273344 PAXIP1-AS1 - PAXIP1 antisense RNA 1 (head to head) ncRNA chr9-4443 chr9 18985389 18985599 + 9.54 0.000 intron (NM_001287049, intron 1 of 3) intron (NM_001287049, intron 1 of 3) 47715 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr2-8761 chr2 162869281 162869491 + 9.54 0.000 Intergenic L1MA2|LINE|L1 -30619 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr8-5941 chr8 19415014 19415224 + 9.54 0.000 intron (NR_148900, intron 7 of 9) MIR3|SINE|MIR 101143 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr5-8832 chr5 150866168 150866378 + 9.54 0.000 intron (NM_001346557, intron 2 of 3) intron (NM_001346557, intron 2 of 3) 19750 NM_001145805 345611 Hs.519680 NM_001145805 ENSG00000237693 IRGM IFI1|IRGM1|LRG-47|LRG47 immunity related GTPase M protein-coding chr15-1074 chr15 101170733 101170943 + 9.54 0.000 Intergenic Intergenic 81210 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr7-3197 chr7 123120326 123120536 + 9.54 0.000 intron (NM_022444, intron 12 of 14) HAL1|LINE|L1 79538 NM_022444 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr13-1679 chr13 76425855 76426065 + 9.54 0.000 Intergenic L1ME1|LINE|L1 460445 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr3-5242 chr3 101636717 101636927 + 9.54 0.000 Intergenic HERVS71-int|LTR|ERV1 -39608 NR_024407 100009676 Hs.743292 NR_024407 ENSG00000256628 ZBTB11-AS1 - ZBTB11 antisense RNA 1 ncRNA chr15-2257 chr15 41885857 41886067 + 9.54 0.000 exon (NM_016642, exon 7 of 68) exon (NM_016642, exon 7 of 68) -6815 NR_135681 105370792 Hs.627877 NR_135681 LOC105370792 - uncharacterized LOC105370792 ncRNA chr4-2868 chr4 74283853 74284063 + 9.54 0.000 intron (NM_001144978, intron 7 of 7) intron (NM_001144978, intron 7 of 7) -24512 NM_001270991 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr8-2698 chr8 94907738 94907948 + 9.54 0.000 intron (NM_001354534, intron 1 of 8) MER4E1|LTR|ERV1 12044 NR_148904 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr1-7007 chr1 169207868 169208078 + 9.54 0.000 intron (NR_104229, intron 10 of 12) intron (NR_104229, intron 10 of 12) 101283 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr13-2161 chr13 110524421 110524631 + 9.54 0.000 intron (NM_017817, intron 1 of 1) intron (NM_017817, intron 1 of 1) -16347 NR_046583 100874203 Hs.508716 NR_046583 ENSG00000232814 COL4A2-AS1 - COL4A2 antisense RNA 1 ncRNA chr8-2215 chr8 18996609 18996819 + 9.54 0.000 intron (NM_015310, intron 1 of 15) L2a|LINE|L2 16989 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr10-4272 chr10 3469117 3469327 + 9.54 0.000 intron (NR_155743, intron 3 of 4) intron (NR_155743, intron 3 of 4) 33616 NR_155745 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr13-803 chr13 113297304 113297514 + 9.54 0.000 5' UTR (NM_005561, exon 1 of 9) 5' UTR (NM_005561, exon 1 of 9) 170 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr20-2395 chr20 18799479 18799689 + 9.54 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -5000 NR_026883 29075 Hs.584899 NM_014162 LINC00652 HSPC072 long intergenic non-protein coding RNA 652 ncRNA chr18-1378 chr18 45026129 45026339 + 9.54 0.000 intron (NM_015559, intron 4 of 5) intron (NM_015559, intron 4 of 5) -56068 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr6-6911 chr6 13857040 13857250 + 9.54 0.000 Intergenic MER5A|DNA|hAT-Charlie -42585 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr15-2231 chr15 97435380 97435590 + 9.54 0.000 intron (NR_120324, intron 2 of 4) L1PA3|LINE|L1 86326 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chr3-9917 chr3 86961578 86961788 + 9.54 0.000 TTS (NM_001320493) TTS (NM_001320493) 29466 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr14-3583 chr14 23246343 23246553 + 9.54 0.000 intron (NM_001370218, intron 5 of 15) intron (NM_001370218, intron 5 of 15) 8512 NM_001282322 100507650 NM_001282322 ENSG00000215277 RNF212B C14orf164 ring finger protein 212B protein-coding chr9-5315 chr9 86672706 86672916 + 9.54 0.000 Intergenic Intergenic 274695 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr9-8656 chr9 129850921 129851131 + 9.54 0.000 intron (NM_001008563, intron 2 of 25) intron (NM_001008563, intron 2 of 25) 15568 NM_001110303 10868 Hs.5452 NM_006676 ENSG00000136878 USP20 LSFR3A|VDU2|hVDU2 ubiquitin specific peptidase 20 protein-coding chr20-2697 chr20 47181373 47181583 + 9.54 0.000 intron (NM_005244, intron 14 of 15) MLT1J2|LTR|ERVL-MaLR 14511 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA chr6-4622 chr6 46573965 46574175 + 9.54 0.000 intron (NM_016593, intron 10 of 11) MLT1K|LTR|ERVL-MaLR 78748 NM_016593 51302 Hs.387367 NM_016593 ENSG00000146233 CYP39A1 - cytochrome P450 family 39 subfamily A member 1 protein-coding chr7-8766 chr7 79239965 79240175 + 9.54 0.000 intron (NM_001301128, intron 1 of 20) MER90|LTR|ERV1 -212887 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr9-5201 chr9 72721174 72721384 + 9.54 0.000 intron (NM_138691, intron 8 of 23) MER34B|LTR|ERV1 152830 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr13-3808 chr13 46154268 46154478 + 9.54 0.000 intron (NM_002298, intron 6 of 15) intron (NM_002298, intron 6 of 15) 27804 NM_002298 3936 Hs.381099 NM_002298 ENSG00000136167 LCP1 CP64|HEL-S-37|L-PLASTIN|LC64P|LPL|PLS2 lymphocyte cytosolic protein 1 protein-coding chr3-6997 chr3 170003923 170004133 + 9.54 0.000 Intergenic Intergenic -33967 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr14-3200 chr14 73249786 73249996 + 9.54 0.000 intron (NM_001365907, intron 4 of 25) intron (NM_001365907, intron 4 of 25) -3890 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr5-3309 chr5 124103758 124103968 + 9.54 0.000 intron (NR_125774, intron 4 of 5) MIRb|SINE|MIR 334657 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr17-7693 chr17 31514679 31514889 + 9.54 0.000 intron (NM_001346748, intron 1 of 12) intron (NM_001346748, intron 1 of 12) -20099 NR_039877 100616248 NR_039877 ENSG00000284424 MIR4724 mir-4724 microRNA 4724 ncRNA chrX-2278 chrX 50093338 50093548 + 9.54 0.000 3' UTR (NM_000084, exon 12 of 12) 3' UTR (NM_000084, exon 12 of 12) 23942 NM_001282163 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr9-3161 chr9 114091920 114092130 + 9.54 0.000 intron (NM_138424, intron 15 of 15) intron (NM_138424, intron 15 of 15) 7032 NM_138424 113220 Hs.28149 NM_138424 ENSG00000136883 KIF12 - kinesin family member 12 protein-coding chr10-4747 chr10 2063266 2063476 + 9.54 0.000 Intergenic THE1B|LTR|ERVL-MaLR 12718 NR_106720 102465944 NR_106720 ENSG00000278069 MIR6072 hsa-mir-6072 microRNA 6072 ncRNA chr1-10480 chr1 163307679 163307889 + 9.54 0.000 intron (NM_001254748, intron 1 of 5) MIRb|SINE|MIR 14007 NM_001254748 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr5-4279 chr5 145976408 145976618 + 9.54 0.000 intron (NM_152550, intron 2 of 9) intron (NM_152550, intron 2 of 9) 39935 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr2-12199 chr2 41903539 41903749 + 9.54 0.000 Intergenic HAL1|LINE|L1 26089 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr16-2288 chr16 4871099 4871309 + 9.54 0.000 exon (NM_001288656, exon 12 of 17) exon (NM_001288656, exon 12 of 17) 22824 NM_001288656 29855 Hs.440219 NM_016936 ENSG00000118900 UBN1 VT|VT4 ubinuclein 1 protein-coding chr10-6237 chr10 64519850 64520060 + 9.54 0.000 Intergenic Intergenic -305573 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr2-5195 chr2 38526373 38526583 + 9.54 0.000 Intergenic L1MC5a|LINE|L1 -10738 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chr1-14887 chr1 81983906 81984116 + 9.54 0.000 intron (NM_001366002, intron 18 of 20) intron (NM_001366002, intron 18 of 20) 181558 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr16-1213 chr16 67957698 67957908 + 9.54 0.000 intron (NM_001145964, intron 4 of 23) intron (NM_001145964, intron 4 of 23) 6249 NM_001145963 6560 Hs.10094 NM_005072 ENSG00000124067 SLC12A4 CTC-479C5.17|KCC1|hKCC1 solute carrier family 12 member 4 protein-coding chr12-2955 chr12 105706163 105706373 + 9.54 0.000 promoter-TSS (NR_110110) promoter-TSS (NR_110110) -506 NR_110111 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chrX-4776 chrX 97020376 97020586 + 9.54 0.000 intron (NM_007309, intron 17 of 26) MER44B|DNA|TcMar-Tigger 136573 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr14-5063 chr14 83138123 83138333 + 9.54 0.000 Intergenic Intergenic 495596 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr10-8040 chr10 63746381 63746591 + 9.54 0.000 Intergenic AluSg7|SINE|Alu -224596 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr13-1944 chr13 97246751 97246961 + 9.54 0.000 intron (NM_144778, intron 1 of 8) intron (NM_144778, intron 1 of 8) 24523 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr8-3035 chr8 139839918 139840128 + 9.54 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -136900 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr7-5488 chr7 42857671 42857881 + 9.54 0.000 Intergenic Intergenic 54067 NM_001363436 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr14-3411 chr14 95918674 95918884 + 9.54 0.000 intron (NR_132398, intron 2 of 2) intron (NR_132398, intron 2 of 2) 42007 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr1-5169 chr1 167387531 167387741 + 9.54 0.000 intron (NM_001198783, intron 8 of 15) intron (NM_001198783, intron 8 of 15) 58566 NM_001198783 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chr11-5801 chr11 6201565 6201775 + 9.54 0.000 Intergenic Intergenic 2446 NM_001005178 120787 Hs.553570 NM_001005178 ENSG00000175485 OR52W1 OR11-71|OR52W1P olfactory receptor family 52 subfamily W member 1 protein-coding chr2-7278 chr2 235080445 235080655 + 9.54 0.000 Intergenic L1MB8|LINE|L1 52815 NM_001371306 chr3-1273 chr3 195836400 195836610 + 9.54 0.000 TTS (NR_134940) TTS (NR_134940) 17723 NR_134940 101929697 Hs.551750 NR_134939 LINC01983 - long intergenic non-protein coding RNA 1983 ncRNA chr8-1107 chr8 60651963 60652173 + 9.54 0.000 Intergenic CpG -26672 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr19-5114 chr19 57387795 57388005 + 9.54 0.000 Intergenic MER74B|LTR|ERVL -1950 NM_152909 147694 Hs.126905 NM_152909 ENSG00000188785 ZNF548 - zinc finger protein 548 protein-coding chr3-9233 chr3 38227908 38228118 + 9.54 0.000 intron (NM_005109, intron 8 of 17) Tigger3c|DNA|TcMar-Tigger -37799 NM_004256 9390 Hs.225941 NM_004256 ENSG00000172940 SLC22A13 OAT10|OCTL1|OCTL3|ORCTL-3|ORCTL3 solute carrier family 22 member 13 protein-coding chr18-3062 chr18 31336131 31336341 + 9.54 0.000 intron (NM_001942, intron 8 of 14) intron (NM_001942, intron 8 of 14) 17700 NR_110789 101927718 Hs.625473 NR_110788 ENSG00000266729 DSG1-AS1 - DSG1 antisense RNA 1 ncRNA chr10-3558 chr10 78895023 78895233 + 9.54 0.000 Intergenic Intergenic 172320 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr19-3900 chr19 41085831 41086041 + 9.54 0.000 Intergenic Intergenic -2515 NM_000766 1553 Hs.567252 NM_000766 ENSG00000197838 CYP2A13 CPAD|CYP2A|CYPIIA13 cytochrome P450 family 2 subfamily A member 13 protein-coding chr6-3222 chr6 139533633 139533843 + 9.54 0.000 Intergenic Intergenic -59142 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr10-6074 chr10 130430330 130430540 + 9.54 0.000 Intergenic Intergenic 294026 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr3-5212 chr3 77523425 77523635 + 9.54 0.000 intron (NM_001290065, intron 6 of 26) intron (NM_001290065, intron 6 of 26) 425518 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr16-3392 chr16 68732000 68732210 + 9.54 0.000 Intergenic Intergenic -5187 NM_001317185 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr1-6962 chr1 160181987 160182197 + 9.54 0.000 intron (NM_001001734, intron 3 of 4) intron (NM_001001734, intron 3 of 4) 4681 NM_001001734 480 Hs.662219 NM_144699 ENSG00000132681 ATP1A4 ATP1A1|ATP1AL2 ATPase Na+/K+ transporting subunit alpha 4 protein-coding chr3-3902 chr3 46626571 46626781 + 9.54 0.000 TTS (NM_001195442) TTS (NM_001195442) 14151 NM_001195442 100132146 Hs.679623 NM_001195442 ENSG00000283473 FAM240A - family with sequence similarity 240 member A protein-coding chr12-3104 chr12 23839956 23840166 + 9.54 0.000 intron (NM_152989, intron 6 of 17) L1MC3|LINE|L1 109609 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr19-3729 chr19 43368315 43368525 + 9.54 0.000 Intergenic Intergenic 14734 NM_020406 57126 Hs.232165 NM_020406 ENSG00000204936 CD177 HNA-2a|HNA2A|NB1|NB1 GP|PRV-1|PRV1 CD177 molecule protein-coding chr13-2845 chr13 109083546 109083756 + 9.54 0.000 intron (NM_015011, intron 27 of 34) intron (NM_015011, intron 27 of 34) 83652 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr17-4003 chr17 73371413 73371623 + 9.54 0.000 intron (NM_001144952, intron 36 of 44) L2-3_Crp|LINE|L2 -59517 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr8-7254 chr8 128391142 128391352 + 9.54 0.000 Intergenic Intergenic 173432 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr11-4558 chr11 123344411 123344621 + 9.54 0.000 Intergenic L2c|LINE|L2 -13906 NM_001367419 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr7-4663 chr7 35219623 35219833 + 9.54 0.000 intron (NM_001077653, intron 6 of 7) intron (NM_001077653, intron 6 of 7) -33566 NR_002833 554236 Hs.594815 NR_002833 DPY19L2P1 - DPY19L2 pseudogene 1 pseudo chr6-4827 chr6 82437844 82438054 + 9.54 0.000 Intergenic Intergenic 73705 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr17-3492 chr17 48505929 48506139 + 9.54 0.000 Intergenic Intergenic 24977 NM_002144 3211 Hs.99992 NM_002144 ENSG00000120094 HOXB1 HCFP3|HOX2|HOX2I|Hox-2.9 homeobox B1 protein-coding chr17-5862 chr17 67963191 67963401 + 9.54 0.000 intron (NM_182641, intron 24 of 27) intron (NM_182641, intron 24 of 27) 30310 NM_181655 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr11-2844 chr11 2294263 2294473 + 9.54 0.000 Intergenic Intergenic 7550 NM_001142946 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr12-4393 chr12 5943812 5944022 + 9.54 0.000 intron (NM_001278597, intron 1 of 25) intron (NM_001278597, intron 1 of 25) 1342 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr11-1926 chr11 68447336 68447546 + 9.54 0.000 intron (NM_002335, intron 22 of 22) intron (NM_002335, intron 22 of 22) -13311 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr4-8171 chr4 130077463 130077673 + 9.54 0.000 Intergenic L1MEg|LINE|L1 -298793 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr1-4376 chr1 154837401 154837611 + 9.54 0.000 intron (NM_001204087, intron 1 of 8) intron (NM_001204087, intron 1 of 8) 22370 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr5-4270 chr5 140719050 140719260 + 9.54 0.000 TTS (NR_026704) TTS (NR_026704) 229 NR_026704 56663 NR_026704 ENSG00000202111 VTRNA1-2 HVG2|VAULTRC2|VR2|hvg-2 vault RNA 1-2 ncRNA chr2-3295 chr2 85754785 85754995 + 9.54 0.000 exon (NM_032827, exon 1 of 3) exon (NM_032827, exon 1 of 3) 899 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr1-6901 chr1 145926699 145926909 + 9.54 0.000 promoter-TSS (NR_147182) promoter-TSS (NR_147182) -27 NR_147182 105371260 Hs.603633 NR_147182 ENSG00000234222 LIX1L-AS1 - LIX1L antisense RNA 1 ncRNA chr22-1694 chr22 48055701 48055911 + 9.54 0.000 Intergenic Intergenic -218558 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr11-6483 chr11 67977518 67977728 + 9.54 0.000 Intergenic SATR1|Satellite|Satellite 26474 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr8-3696 chr8 18403061 18403271 + 9.54 0.000 Intergenic L1M3de|LINE|L1 11884 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr22-1466 chr22 50455700 50455910 + 9.54 0.000 intron (NM_001365819, intron 30 of 39) intron (NM_001365819, intron 30 of 39) 19230 NM_002972 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr21-1749 chr21 34997475 34997685 + 9.54 0.000 intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) 41846 NR_026812 80215 Hs.672131 NM_025143 RUNX1-IT1 C21orf96 RUNX1 intronic transcript 1 ncRNA chr4-7823 chr4 99914362 99914572 + 9.54 0.000 intron (NM_001031723, intron 3 of 7) L1PA5|LINE|L1 -19921 NM_001243736 8649 Hs.433332 NM_021970 ENSG00000109270 LAMTOR3 MAP2K1IP1|MAPBP|MAPKSP1|MP1|PRO0633|Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding chrX-1722 chrX 26111944 26112154 + 9.54 0.000 Intergenic Intergenic -26294 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr10-3122 chr10 37796132 37796342 + 9.54 0.000 intron (NR_147992, intron 6 of 8) AluSz|SINE|Alu -1062 NR_051997 100419868 Hs.741719 NR_051997 ZNF33BP1 - zinc finger protein 33B pseudogene 1 pseudo chr2-10865 chr2 64532437 64532647 + 9.54 0.000 intron (NM_001002243, intron 1 of 8) L2b|LINE|L2 7029 NR_039633 100616419 NR_039633 ENSG00000283204 MIR4434 - microRNA 4434 ncRNA chr5-2357 chr5 78610424 78610634 + 9.54 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 38243 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr5-3881 chr5 145903915 145904125 + 9.54 0.000 Intergenic Intergenic -31052 NM_001080516 643226 Hs.570895 NM_001080516 ENSG00000204928 GRXCR2 DFNB101 glutaredoxin and cysteine rich domain containing 2 protein-coding chr1-7807 chr1 53598470 53598680 + 9.54 0.000 intron (NM_147193, intron 2 of 9) MLT1B|LTR|ERVL-MaLR 135629 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr2-9663 chr2 28515360 28515570 + 9.54 0.000 intron (NM_001170585, intron 1 of 56) intron (NM_001170585, intron 1 of 56) 19394 NM_001170585 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2-10167 chr2 86283523 86283733 + 9.54 0.000 intron (NM_001164730, intron 1 of 6) LTR87|LTR|ERVL? 53998 NM_001371279 chr3-5722 chr3 16494990 16495200 + 9.54 0.000 intron (NM_015150, intron 1 of 9) intron (NM_015150, intron 1 of 9) 18604 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr10-3830 chr10 133467451 133467661 + 9.54 0.000 intron (NR_149718, intron 12 of 12) intron (NR_149718, intron 12 of 12) 13628 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr13-3323 chr13 59529434 59529644 + 9.54 0.000 Intergenic Intergenic -483179 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr10-2745 chr10 117620959 117621169 + 9.54 0.000 Intergenic Intergenic -75996 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr13-1799 chr13 30985727 30985937 + 9.54 0.000 Intergenic L1MC|LINE|L1 53176 NM_001353388 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr7-2670 chr7 6831228 6831438 + 9.54 0.000 Intergenic Intergenic -5038 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr22-3452 chr22 41535324 41535534 + 9.54 0.000 intron (NM_001018050, intron 2 of 5) L3|LINE|CR1 9041 NM_001018050 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding chr1-6025 chr1 62924443 62924653 + 9.54 0.000 Intergenic Intergenic 86377 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr12-7960 chr12 109794211 109794421 + 9.54 0.000 intron (NM_001177431, intron 8 of 15) intron (NM_001177431, intron 8 of 15) 20480 NM_001177431 59341 Hs.506713 NM_021625 ENSG00000111199 TRPV4 BCYM3|CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel subfamily V member 4 protein-coding chr12-2029 chr12 52213464 52213674 + 9.54 0.000 intron (NR_027358, intron 3 of 4) intron (NR_027358, intron 3 of 4) 2639 NR_027358 283404 Hs.662443 NR_027358 ENSG00000258279 LINC00592 - long intergenic non-protein coding RNA 592 ncRNA chr22-1761 chr22 26321586 26321796 + 9.54 0.000 intron (NM_001184776, intron 9 of 14) intron (NM_001184776, intron 9 of 14) -107569 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr10-3750 chr10 121524446 121524656 + 9.54 0.000 intron (NR_073009, intron 4 of 16) intron (NR_073009, intron 4 of 16) 6763 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr7-2473 chr7 1935906 1936116 + 9.54 0.000 intron (NM_001013837, intron 17 of 18) intron (NM_001013837, intron 17 of 18) 4560 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr10-2251 chr10 102414996 102415206 + 9.54 0.000 exon (NM_001270965, exon 5 of 18) exon (NM_001270965, exon 5 of 18) 3684 NM_002779 5662 Hs.154658 NM_002779 ENSG00000059915 PSD EFA6|EFA6A|PSD1|TYL pleckstrin and Sec7 domain containing protein-coding chr8-2008 chr8 99409085 99409295 + 9.54 0.000 intron (NM_017890, intron 21 of 61) L2|LINE|L2 127540 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA chr7-2801 chr7 85426365 85426575 + 9.54 0.000 intron (NR_134240, intron 1 of 3) L1MA2|LINE|L1 5348 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr19-5714 chr19 14653863 14654073 + 9.54 0.000 intron (NM_001289159, intron 3 of 12) AluSz|SINE|Alu 20876 NM_001289159 84658 Hs.658712 NM_032571 ENSG00000131355 ADGRE3 EMR3 adhesion G protein-coupled receptor E3 protein-coding chr22-1433 chr22 45279948 45280158 + 9.54 0.000 Intergenic Intergenic -4896 NM_006953 7380 Hs.632787 NM_006953 ENSG00000100373 UPK3A UP3A|UPIII|UPIIIA|UPK3 uroplakin 3A protein-coding chr15-3414 chr15 89755016 89755226 + 9.54 0.000 Intergenic Intergenic -3812 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr12-2795 chr12 87157907 87158117 + 9.54 0.000 Intergenic Intergenic -172727 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr16-3574 chr16 66548478 66548688 + 9.54 0.000 intron (NM_001271934, intron 2 of 10) intron (NM_001271934, intron 2 of 10) 1539 NR_073520 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2 protein-coding chr16-3051 chr16 55559216 55559426 + 9.54 0.000 intron (NM_017839, intron 11 of 13) intron (NM_017839, intron 11 of 13) -7363 NM_032330 84290 Hs.660027 NM_032330 ENSG00000256812 CAPNS2 CSS2 calpain small subunit 2 protein-coding chr2-6026 chr2 105394935 105395145 + 9.54 0.000 intron (NM_201555, intron 2 of 7) intron (NM_201555, intron 2 of 7) 4011 NM_001450 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr12-7517 chr12 68872738 68872948 + 9.54 0.000 intron (NM_001874, intron 3 of 8) MER113B|DNA|hAT-Charlie 60328 NM_198320 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr4-4044 chr4 2943189 2943399 + 9.54 0.000 intron (NM_001291979, intron 13 of 16) intron (NM_001291979, intron 13 of 16) 7748 NR_015453 317648 Hs.398178 NR_015453 ENSG00000249673 NOP14-AS1 C4orf10|RES4-24 NOP14 antisense RNA 1 ncRNA chr5-3932 chr5 176996928 176997138 + 9.54 0.000 intron (NM_001199298, intron 1 of 14) L1M4a2|LINE|L1 9409 NM_016290 51720 Hs.232721 NM_016290 ENSG00000087206 UIMC1 RAP80|X2HRIP110 ubiquitin interaction motif containing 1 protein-coding chr3-6090 chr3 52384372 52384582 + 9.54 0.000 intron (NM_015512, intron 52 of 77) MIRb|SINE|MIR 25531 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr6-5005 chr6 108876973 108877183 + 9.54 0.000 intron (NM_001286609, intron 4 of 16) intron (NM_001286609, intron 4 of 16) 28656 NM_032131 84071 Hs.645481 NM_032131 ENSG00000118690 ARMC2 SPGF38|bA787I22.1 armadillo repeat containing 2 protein-coding chr16-2819 chr16 68778572 68778782 + 9.54 0.000 intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) 41385 NM_004360 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr19-3964 chr19 711908 712118 + 9.54 0.000 intron (NM_002579, intron 1 of 8) intron (NM_002579, intron 1 of 8) 3078 NM_001040134 5064 Hs.631841 NM_002579 ENSG00000099864 PALM PALM1 paralemmin protein-coding chr5-6312 chr5 126938556 126938766 + 9.54 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 91897 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr9-7707 chr9 72756942 72757152 + 9.54 0.000 intron (NM_138691, intron 12 of 23) intron (NM_138691, intron 12 of 23) 117062 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr1-7853 chr1 87334105 87334315 + 9.54 0.000 intron (NM_006769, intron 2 of 4) intron (NM_006769, intron 2 of 4) 2466 NM_001369491 8543 Hs.436792 NM_006769 ENSG00000143013 LMO4 - LIM domain only 4 protein-coding chr10-2395 chr10 117671834 117672044 + 9.54 0.000 Intergenic Intergenic -126871 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr2-2795 chr2 25633962 25634172 + 9.54 0.000 intron (NM_033147, intron 3 of 19) SVA_D|Retroposon|SVA 16155 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr6-3316 chr6 166103968 166104178 + 9.54 0.000 Intergenic Intergenic 6353 NR_147704 729681 Hs.520550 NR_147704 LOC729681 - uncharacterized LOC729681 ncRNA chr17-3918 chr17 57104778 57104988 + 9.54 0.000 intron (NM_001242903, intron 2 of 11) intron (NM_001242903, intron 2 of 11) 9394 NM_001370427 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr17-3450 chr17 33220180 33220390 + 9.54 0.000 intron (NM_001094, intron 1 of 9) L3|LINE|CR1 72703 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr2-8877 chr2 176942194 176942404 + 9.54 0.000 Intergenic MER3|DNA|hAT-Charlie 270112 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr5-3258 chr5 100235163 100235373 + 9.54 0.000 Intergenic L1PREC2|LINE|L1 152986 NR_027503 100133050 Hs.534796 NR_027503 LOC100133050 - glucuronidase beta pseudogene pseudo chr20-1287 chr20 49768661 49768871 + 9.54 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -43947 NM_001260491 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr7-5199 chr7 11714729 11714939 + 9.54 0.000 intron (NM_015204, intron 1 of 26) intron (NM_015204, intron 1 of 26) 117364 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr12-4861 chr12 60148882 60149092 + 9.54 0.000 Intergenic Intergenic 459617 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr4-2807 chr4 35273801 35274011 + 9.54 0.000 Intergenic Intergenic 970033 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr2-10439 chr2 204195929 204196139 + 9.54 0.000 Intergenic Intergenic 259286 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr6-2898 chr6 12678407 12678617 + 9.54 0.000 Intergenic Intergenic -38255 NM_001322308 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr7-2374 chr7 29212411 29212621 + 9.54 0.000 intron (NM_001293072, intron 1 of 12) intron (NM_001293072, intron 1 of 12) -3546 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr1-8347 chr1 56577195 56577405 + 9.54 0.000 intron (NM_003713, intron 1 of 5) intron (NM_003713, intron 1 of 5) 2263 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr17-8561 chr17 79894622 79894832 + 9.54 0.000 Intergenic Intergenic -24630 NR_110851 101928738 Hs.399280 NR_110851 ENSG00000262188 LINC01978 - long intergenic non-protein coding RNA 1978 ncRNA chr5-6221 chr5 76807335 76807545 + 9.54 0.000 Intergenic Intergenic -11590 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr20-3718 chr20 16834989 16835199 + 9.54 0.000 Intergenic AluSx|SINE|Alu 86741 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr11-3825 chr11 67899486 67899696 + 9.54 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -94255 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr1-15973 chr1 193591506 193591716 + 9.54 0.000 Intergenic Intergenic 286866 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr12-2544 chr12 105138258 105138468 + 9.54 0.000 intron (NM_001293640, intron 15 of 32) intron (NM_001293640, intron 15 of 32) 30632 NM_001293640 23325 Hs.12144 NM_015275 ENSG00000136051 WASHC4 KIAA1033|MRT43|SWIP WASH complex subunit 4 protein-coding chr13-267 chr13 36346168 36346378 + 9.54 0.000 promoter-TSS (NR_045180) promoter-TSS (NR_045180) 121 NM_015087 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding chr2-7793 chr2 43340156 43340366 + 9.54 0.000 intron (NR_144316, intron 29 of 36) intron (NR_144316, intron 29 of 36) 113050 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr8-5846 chr8 6454256 6454466 + 9.54 0.000 intron (NM_024596, intron 8 of 13) intron (NM_024596, intron 8 of 13) 47208 NM_001322045 79648 Hs.593807 NM_024596 ENSG00000147316 MCPH1 BRIT1|MCT microcephalin 1 protein-coding chr22-1273 chr22 31613698 31613908 + 9.54 0.000 exon (NM_001258327, exon 25 of 31) exon (NM_001258327, exon 25 of 31) 7728 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr4-6223 chr4 58434825 58435035 + 9.54 0.000 Intergenic AluSx3|SINE|Alu 101398 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chrX-5172 chrX 132964037 132964247 + 9.54 0.000 Intergenic Intergenic -2772 NM_001077188 90161 Hs.385956 NM_147175 ENSG00000171004 HS6ST2 MRXSPM heparan sulfate 6-O-sulfotransferase 2 protein-coding chr13-2729 chr13 95128535 95128745 + 9.54 0.000 intron (NM_001105515, intron 19 of 20) intron (NM_001105515, intron 19 of 20) -81704 NR_145733 109616987 NR_145733 SNORD13G - small nucleolar RNA, C/D box 13G snoRNA chr16-1958 chr16 66874864 66875074 + 9.54 0.000 Intergenic AluSz6|SINE|Alu -5546 NM_020786 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chrX-3237 chrX 67827443 67827653 + 9.54 0.000 Intergenic L1M2|LINE|L1 282925 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr2-8006 chr2 68435589 68435799 + 9.54 0.000 Intergenic Charlie8|DNA|hAT-Charlie 31600 NM_001024680 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding chr9-4309 chr9 122849360 122849570 + 9.54 0.000 3' UTR (NM_001354482, exon 20 of 20) 3' UTR (NM_001354482, exon 20 of 20) -20877 NM_005388 5082 Hs.271749 NM_005388 ENSG00000136940 PDCL PhLP phosducin like protein-coding chrX-3169 chrX 27959512 27959722 + 9.54 0.000 Intergenic Intergenic 21832 NM_001017930 139425 Hs.447365 NM_001017930 ENSG00000226372 DCAF8L1 WDR42B DDB1 and CUL4 associated factor 8 like 1 protein-coding chr10-8791 chr10 106661414 106661624 + 9.54 0.000 intron (NM_001206569, intron 17 of 25) intron (NM_001206569, intron 17 of 25) 503187 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr9-3537 chr9 36445645 36445855 + 9.54 0.000 Intergenic Intergenic -44552 NM_194330 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr10-8691 chr10 101441545 101441755 + 9.54 0.000 intron (NM_001256856, intron 2 of 13) AluSx|SINE|Alu 87485 NM_033637 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr19-3806 chr19 5746776 5746986 + 9.54 0.000 intron (NM_152784, intron 9 of 21) AluJr|SINE|Alu 26244 NM_152784 257062 Hs.631842 NM_152784 ENSG00000174898 CATSPERD TMEM146 cation channel sperm associated auxiliary subunit delta protein-coding chr2-4579 chr2 86138550 86138760 + 9.54 0.000 3' UTR (NM_017952, exon 24 of 24) 3' UTR (NM_017952, exon 24 of 24) 2785 NR_004378 692225 Hs.723087 NR_004378 ENSG00000208772 SNORD94 U94 small nucleolar RNA, C/D box 94 snoRNA chr2-6084 chr2 167485467 167485677 + 9.54 0.000 Intergenic L2c|LINE|L2 298200 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr4-2784 chr4 21189106 21189316 + 9.54 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) 114695 NM_147183 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chrX-5076 chrX 125391026 125391236 + 9.54 0.000 Intergenic HERVH-int|LTR|ERV1 71260 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr11-7940 chr11 3134152 3134362 + 9.54 0.000 intron (NM_145638, intron 1 of 20) intron (NM_145638, intron 1 of 20) 31053 NM_020896 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr4-938 chr4 88054294 88054504 + 9.54 0.000 intron (NR_156488, intron 7 of 13) AluSx|SINE|Alu 46764 NM_000297 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr7-5868 chr7 91558222 91558432 + 9.54 0.000 Intergenic Intergenic 293894 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr1-4787 chr1 16441245 16441455 + 9.54 0.000 intron (NM_018090, intron 1 of 7) intron (NM_018090, intron 1 of 7) 626 NM_018090 55707 Hs.437385 NM_018090 ENSG00000157191 NECAP2 - NECAP endocytosis associated 2 protein-coding chr10-4744 chr10 1725271 1725481 + 9.54 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) 12149 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr1-4780 chr1 14614436 14614646 + 9.54 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) 15824 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr9-3642 chr9 92794432 92794642 + 9.54 0.000 Intergenic Intergenic 13550 NR_136301 101929748 Hs.551296 NR_136301 LOC101929748 - uncharacterized LOC101929748 ncRNA chr22-1316 chr22 46798707 46798917 + 9.54 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 24885 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr2-14490 chr2 226137306 226137516 + 9.54 0.000 Intergenic LTR24|LTR|ERV1 -5383 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr12-3062 chr12 6632627 6632837 + 9.54 0.000 intron (NM_020400, intron 1 of 1) intron (NM_020400, intron 1 of 1) -1083 NM_001142961 57121 Hs.155538 NM_020400 ENSG00000184574 LPAR5 GPR92|GPR93|KPG_010|LPA5 lysophosphatidic acid receptor 5 protein-coding chr16-1954 chr16 53516132 53516342 + 9.54 0.000 Intergenic Intergenic -12933 NM_001012398 64400 Hs.380897 NM_022476 ENSG00000166971 AKTIP FT1|FTS AKT interacting protein protein-coding chr12-3234 chr12 57509928 57510138 + 9.54 0.000 intron (NM_004990, intron 11 of 20) AluJb|SINE|Alu -2655 NR_106816 102465454 NR_106816 ENSG00000284152 MIR6758 hsa-mir-6758 microRNA 6758 ncRNA chr10-4472 chr10 78890174 78890384 + 9.54 0.000 Intergenic Intergenic 177169 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr10-7685 chr10 29083360 29083570 + 9.54 0.000 Intergenic Intergenic -205605 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr12-3209 chr12 55041649 55041859 + 9.54 0.000 Intergenic Intergenic 21780 NM_021191 58158 Hs.591024 NM_021191 ENSG00000123307 NEUROD4 ATH-3|ATH3|Atoh3|MATH-3|MATH3|bHLHa4 neuronal differentiation 4 protein-coding chr9-4408 chr9 137899873 137900083 + 9.54 0.000 intron (NM_001243812, intron 3 of 45) intron (NM_001243812, intron 3 of 45) -7408 NR_121583 100133077 Hs.640081 NR_121583 ENSG00000203987 LOC100133077 - uncharacterized LOC100133077 ncRNA chrX-4669 chrX 82370777 82370987 + 9.54 0.000 Intergenic MER51B|LTR|ERV1 -1137408 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr1-12137 chr1 172483581 172483791 + 9.54 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 30793 NM_001300760 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr2-4252 chr2 222359154 222359364 + 9.54 0.000 Intergenic Intergenic 38598 NR_136641 440934 Hs.732732 NR_136638 ENSG00000237732 CT75 - cancer/testis associated transcript 75 ncRNA chr5-7337 chr5 17020678 17020888 + 9.54 0.000 Intergenic Intergenic -84495 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr4-5430 chr4 15240803 15241013 + 9.54 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) -99080 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr2-12850 chr2 96438874 96439084 + 9.54 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 66378 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr17-6564 chr17 44668194 44668404 + 9.54 0.000 intron (NM_001145080, intron 5 of 7) intron (NM_001145080, intron 5 of 7) 11831 NM_001145080 284071 Hs.349758 NM_001033659 ENSG00000180336 MEIOC C17orf104 meiosis specific with coiled-coil domain protein-coding chr9-1224 chr9 130042559 130042769 + 9.54 0.000 intron (NM_001363755, intron 1 of 15) CpG 525 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr6-1079 chr6 43247338 43247548 + 9.54 0.000 intron (NM_032538, intron 2 of 14) intron (NM_032538, intron 2 of 14) 3962 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr2-832 chr2 113583925 113584135 + 9.54 0.000 promoter-TSS (NR_031632) promoter-TSS (NR_031632) 377 NR_024077 375260 Hs.446466 NM_198943 ENSG00000146556 WASH2P FAM39B WASP family homolog 2, pseudogene pseudo chr7-5876 chr7 92740987 92741197 + 9.54 0.000 intron (NM_001259, intron 3 of 7) L1ME3G|LINE|L1 92867 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr3-5691 chr3 13869921 13870131 + 9.54 0.000 intron (NM_004625, intron 2 of 3) L2c|LINE|L2 10045 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding chr16-2700 chr16 84738375 84738585 + 9.54 0.000 intron (NR_073577, intron 2 of 11) intron (NR_073577, intron 2 of 11) 38480 NR_073577 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr17-8257 chr17 66894836 66895046 + 9.54 0.000 TTS (NM_145811) TTS (NM_145811) 59824 NM_145811 27091 Hs.278907 NM_014404 ENSG00000075429 CACNG5 - calcium voltage-gated channel auxiliary subunit gamma 5 protein-coding chr6-7164 chr6 37339222 37339432 + 9.54 0.000 Intergenic AluY|SINE|Alu -14656 NM_003958 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr5-2253 chr5 16489381 16489591 + 9.54 0.000 intron (NM_001034850, intron 3 of 8) intron (NM_001034850, intron 3 of 8) 19512 NM_019000 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr4-4928 chr4 124354299 124354509 + 9.54 0.000 Intergenic AluJb|SINE|Alu 204030 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr7-7287 chr7 38187083 38187293 + 9.54 0.000 intron (NM_001363344, intron 2 of 8) intron (NM_001363344, intron 2 of 8) 8943 NM_001363344 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr12-6936 chr12 25875848 25876058 + 9.54 0.000 Intergenic Intergenic -1874 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chrX-480 chrX 74293415 74293625 + 9.54 0.000 promoter-TSS (NR_028379) promoter-TSS (NR_028379) 54 NR_028379 100302692 Hs.349570 NR_028379 ENSG00000230590 FTX LINC00182|MIR374AHG|NCRNA00182 FTX transcript, XIST regulator ncRNA chr11-5581 chr11 107594013 107594223 + 9.54 0.000 intron (NM_001308018, intron 1 of 12) intron (NM_001308018, intron 1 of 12) 2971 NM_018712 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr16-5416 chr16 89960900 89961110 + 9.54 0.000 exon (NM_001242819, exon 6 of 12) exon (NM_001242819, exon 6 of 12) 7628 NR_145807 109623464 NR_145807 SNORA119 - small nucleolar RNA, H/ACA box 119 snoRNA chr10-4994 chr10 31876845 31877055 + 9.54 0.000 intron (NM_001270696, intron 3 of 17) intron (NM_001270696, intron 3 of 17) 31976 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr5-6916 chr5 134911448 134911658 + 9.54 0.000 intron (NM_032151, intron 2 of 3) intron (NM_032151, intron 2 of 3) 6433 NM_032151 84105 Hs.710014 NM_032151 ENSG00000132570 PCBD2 DCOH2|DCOHM|PHS2 pterin-4 alpha-carbinolamine dehydratase 2 protein-coding chr13-1426 chr13 42266562 42266772 + 9.54 0.000 Intergenic Intergenic -5485 NM_016248 11215 Hs.105105 NM_016248 ENSG00000023516 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A-kinase anchoring protein 11 protein-coding chr11-2909 chr11 64432380 64432590 + 9.54 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -16572 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr21-699 chr21 29007863 29008073 + 9.54 0.000 exon (NM_016940, exon 4 of 5) exon (NM_016940, exon 4 of 5) 11381 NM_016940 10069 Hs.713123 NM_016940 ENSG00000156253 RWDD2B C21orf6|GL011 RWD domain containing 2B protein-coding chr1-7755 chr1 35598885 35599095 + 9.54 0.000 TTS (NM_001199780) TTS (NM_001199780) 25676 NM_178548 339488 Hs.567844 NM_178548 ENSG00000116819 TFAP2E AP2E transcription factor AP-2 epsilon protein-coding chr5-3566 chr5 61942180 61942390 + 9.54 0.000 Intergenic Intergenic -206587 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr14-1429 chr14 73259326 73259536 + 9.54 0.000 exon (NM_173462, exon 15 of 26) exon (NM_173462, exon 15 of 26) -13430 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr10-6681 chr10 111436178 111436388 + 9.54 0.000 Intergenic Intergenic 321992 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chrX-5030 chrX 120381742 120381952 + 9.54 0.000 3' UTR (NM_001142447, exon 8 of 8) 3' UTR (NM_001142447, exon 8 of 8) 19758 NM_001142447 23439 Hs.292599 NM_012069 ENSG00000101892 ATP1B4 - ATPase Na+/K+ transporting family member beta 4 protein-coding chr10-8753 chr10 103885873 103886083 + 9.54 0.000 intron (NM_024928, intron 9 of 9) intron (NM_024928, intron 9 of 9) -30572 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr13-632 chr13 96994130 96994340 + 9.54 0.000 intron (NM_001346197, intron 1 of 3) CpG 241 NM_080818 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding chr7-5879 chr7 93022152 93022362 + 9.54 0.000 Intergenic LTR88a|LTR|Gypsy? 95722 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding chr10-6547 chr10 71804296 71804506 + 9.54 0.000 intron (NM_001171934, intron 8 of 21) intron (NM_001171934, intron 8 of 21) -7482 NM_001171935 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr18-1937 chr18 35432739 35432949 + 9.54 0.000 Intergenic Intergenic -55507 NM_145756 252884 Hs.351005 NM_145756 ENSG00000186496 ZNF396 ZSCAN14 zinc finger protein 396 protein-coding chr18-1370 chr18 34524870 34525080 + 9.54 0.000 intron (NM_001198945, intron 1 of 10) intron (NM_001198945, intron 1 of 10) 31663 NM_032979 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr1-4160 chr1 16991638 16991848 + 9.54 0.000 exon (NM_001141973, exon 20 of 29) exon (NM_001141973, exon 20 of 29) -10157 NM_017459 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chrX-3187 chrX 41351803 41352013 + 9.54 0.000 TTS (NM_001193416) TTS (NM_001193416) 17742 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chrX-1924 chrX 153241686 153241896 + 9.54 0.000 Intergenic Intergenic 62507 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chr10-5619 chr10 94792841 94793051 + 9.54 0.000 intron (NM_000769, intron 5 of 8) L1PA7|LINE|L1 30265 NM_000769 1557 Hs.282409 NM_000769 ENSG00000165841 CYP2C19 CPCJ|CYP2C|CYPIIC17|CYPIIC19|P450C2C|P450IIC19 cytochrome P450 family 2 subfamily C member 19 protein-coding chr19-4344 chr19 1913662 1913872 + 9.54 0.000 TTS (NM_001329533) TTS (NM_001329533) 8368 NM_001329540 113178 Hs.144980 NM_079834 ENSG00000227500 SCAMP4 SCAMP-4 secretory carrier membrane protein 4 protein-coding chr1-5906 chr1 10528728 10528938 + 9.54 0.000 intron (NM_004565, intron 2 of 8) intron (NM_004565, intron 2 of 8) 53883 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr6-2790 chr6 143897523 143897733 + 9.54 0.000 intron (NM_001013623, intron 4 of 7) intron (NM_001013623, intron 4 of 7) 33154 NM_001013623 153918 Hs.121188 NM_001013623 ENSG00000118491 ZC2HC1B C6orf94|FAM164B|dJ468K18.5 zinc finger C2HC-type containing 1B protein-coding chr9-1973 chr9 105187797 105188007 + 9.54 0.000 Intergenic L1PA14|LINE|L1 -56703 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr5-2886 chr5 98292552 98292762 + 9.54 0.000 Intergenic L1ME1|LINE|L1 -131418 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr20-1300 chr20 57089720 57089930 + 9.54 0.000 Intergenic Intergenic -123871 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chrX-1407 chrX 17280281 17280491 + 9.54 0.000 Intergenic Intergenic -94814 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr1-7753 chr1 34594798 34595008 + 9.54 0.000 Intergenic Intergenic 74791 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr2-6786 chr2 46644936 46645146 + 9.54 0.000 Intergenic Intergenic 27826 NM_014171 9419 Hs.133998 NM_014171 ENSG00000119878 CRIPT HSPC139|SSMDF CXXC repeat containing interactor of PDZ3 domain protein-coding chrX-705 chrX 93387690 93387900 + 9.54 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 285783 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr22-2033 chr22 39947998 39948208 + 9.54 0.000 intron (NM_001291826, intron 2 of 6) intron (NM_001291826, intron 2 of 6) 1286 NM_001291825 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chr17-2320 chr17 48142862 48143072 + 9.54 0.000 intron (NM_001075099, intron 11 of 12) AluJo|SINE|Alu 13544 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr10-3352 chr10 14713123 14713333 + 9.54 0.000 intron (NM_031453, intron 1 of 4) L1M5|LINE|L1 61669 NM_001282695 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chrX-3748 chrX 125424512 125424722 + 9.54 0.000 Intergenic Intergenic 104746 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr14-4904 chr14 72966172 72966382 + 9.54 0.000 Intergenic AluJr|SINE|Alu 20679 NM_178441 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr3-9205 chr3 37097591 37097801 + 9.54 0.000 intron (NM_017724, intron 4 of 13) intron (NM_017724, intron 4 of 13) 76886 NM_006309 9209 Hs.740522 NM_006309 ENSG00000093167 LRRFIP2 HUFI-2 LRR binding FLII interacting protein 2 protein-coding chr2-13927 chr2 183332785 183332995 + 9.54 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 208447 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr6-1906 chr6 16837074 16837284 + 9.54 0.000 Intergenic Intergenic -75689 NM_001128164 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr4-8118 chr4 126568940 126569150 + 9.54 0.000 Intergenic Intergenic 1061786 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr18-772 chr18 22742522 22742732 + 9.54 0.000 intron (NR_110782, intron 1 of 1) L1M3f|LINE|L1 44210 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr3-5367 chr3 147613840 147614050 + 9.54 0.000 Intergenic Intergenic 192618 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr3-4258 chr3 145637453 145637663 + 9.54 0.000 Intergenic Intergenic 431627 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr2-4619 chr2 149541057 149541267 + 9.54 0.000 Intergenic L2a|LINE|L2 -46196 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr9-5348 chr9 89510701 89510911 + 9.54 0.000 Intergenic HAL1|LINE|L1 -12833 NM_001371194 chr8-3392 chr8 61493931 61494141 + 9.54 0.000 intron (NM_173519, intron 5 of 5) intron (NM_173519, intron 5 of 5) 195775 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr14-2032 chr14 61602331 61602541 + 9.54 0.000 intron (NR_039985, intron 1 of 2) L1MEg1|LINE|L1 -31783 NR_110416 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr11-4468 chr11 105359833 105360043 + 9.54 0.000 Intergenic Intergenic -220169 NM_021571 59082 Hs.56279 NM_021571 ENSG00000255501 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family member 18 protein-coding chr4-5895 chr4 133752468 133752678 + 9.54 0.000 Intergenic MER1B|DNA|hAT-Charlie 449216 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr9-6780 chr9 27379276 27379486 + 9.54 0.000 intron (NM_024761, intron 2 of 3) intron (NM_024761, intron 2 of 3) -82231 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chrX-3896 chrX 7631480 7631690 + 9.54 0.000 Intergenic L1P4a|LINE|L1 -210677 NM_013452 26609 Hs.278906 NM_013452 ENSG00000182583 VCX VCX-10r|VCX-B1|VCX1|VCX10R|VCXB1 variable charge X-linked protein-coding chr20-4384 chr20 57613269 57613479 + 9.54 0.000 intron (NR_136660, intron 3 of 7) intron (NR_136660, intron 3 of 7) 7052 NM_001323966 81030 Hs.302123 NM_030776 ENSG00000124256 ZBP1 C20orf183|DAI|DLM-1|DLM1 Z-DNA binding protein 1 protein-coding chr4-1412 chr4 6802971 6803181 + 9.54 0.000 intron (NM_001100590, intron 1 of 8) AluJr|SINE|Alu 20344 NM_001100590 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr2-6314 chr2 68440626 68440836 + 9.54 0.000 Intergenic Intergenic 26563 NM_001024680 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding chr1-9621 chr1 46056045 46056255 + 9.54 0.000 intron (NR_137329, intron 5 of 8) AluSx|SINE|Alu 74523 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr3-4066 chr3 86424783 86424993 + 9.54 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -57055 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr5-8948 chr5 159357164 159357374 + 9.54 0.000 intron (NR_037889, intron 4 of 4) intron (NR_037889, intron 4 of 4) 25751 NR_037889 285626 Hs.449275 NR_037889 ENSG00000249738 LOC285626 - uncharacterized LOC285626 ncRNA chr9-6138 chr9 35057018 35057228 + 9.54 0.000 exon (NM_007126, exon 17 of 17) exon (NM_007126, exon 17 of 17) 14883 NM_001040410 138724 Hs.148250 NM_203299 ENSG00000174038 C9orf131 - chromosome 9 open reading frame 131 protein-coding chr3-1619 chr3 37176100 37176310 + 9.54 0.000 promoter-TSS (NM_001282691) promoter-TSS (NM_001282691) 155 NM_001348305 9209 Hs.740522 NM_006309 ENSG00000093167 LRRFIP2 HUFI-2 LRR binding FLII interacting protein 2 protein-coding chr9-7801 chr9 80320576 80320786 + 9.54 0.000 Intergenic Intergenic 345658 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr1-15842 chr1 180606170 180606380 + 9.54 0.000 Intergenic Intergenic -25747 NM_001135669 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding chr11-4651 chr11 45314583 45314793 + 9.54 0.000 Intergenic L1ME3A|LINE|L1 -28347 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr17-6147 chr17 81615028 81615238 + 9.54 0.000 intron (NM_001369698, intron 3 of 16) AluSx|SINE|Alu 21979 NM_017921 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr4-1577 chr4 4870321 4870531 + 9.54 0.000 Intergenic Intergenic 10761 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr8-4994 chr8 141687293 141687503 + 9.54 0.000 Intergenic Intergenic 98915 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr17-1200 chr17 76585873 76586083 + 9.54 0.000 promoter-TSS (NM_006456) promoter-TSS (NM_006456) -118 NM_006456 10610 Hs.592105 NM_006456 ENSG00000070731 ST6GALNAC2 SAITL1|SIAT7|SIAT7B|SIATL1|ST6GalNAII|STHM ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein-coding chr21-961 chr21 44765564 44765774 + 9.54 0.000 Intergenic Intergenic 36151 NM_001202489 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding chr8-3876 chr8 37984015 37984225 + 9.54 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -17521 NM_000025 155 Hs.2549 NM_000025 ENSG00000188778 ADRB3 BETA3AR adrenoceptor beta 3 protein-coding chr20-1158 chr20 56468296 56468506 + 9.54 0.000 promoter-TSS (NM_016407) promoter-TSS (NM_016407) -184 NM_001283036 51507 Hs.517134 NM_016407 ENSG00000022277 RTF2 C20orf43|CDAO5|HSPC164|RTFDC1|SHUJUN-3 replication termination factor 2 protein-coding chr9-5589 chr9 114081401 114081611 + 9.54 0.000 Intergenic Intergenic -3206 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr17-5251 chr17 17967176 17967386 + 9.54 0.000 intron (NM_001288787, intron 1 of 13) intron (NM_001288787, intron 1 of 13) 5119 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr21-829 chr21 43752000 43752210 + 9.54 0.000 intron (NM_003681, intron 7 of 10) (TG)n|Simple_repeat|Simple_repeat 10619 NM_001331030 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr2-6654 chr2 7936037 7936247 + 9.54 0.000 intron (NR_015405, intron 2 of 2) intron (NR_015405, intron 2 of 2) -36487 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr6-2704 chr6 42263269 42263479 + 9.54 0.000 exon (NM_033502, exon 8 of 18) exon (NM_033502, exon 8 of 18) -45513 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr20-4272 chr20 49669847 49670057 + 9.54 0.000 intron (NM_004776, intron 1 of 8) L1ME4c|LINE|L1 43926 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr22-1867 chr22 39959786 39959996 + 9.54 0.000 intron (NM_001291825, intron 2 of 6) intron (NM_001291825, intron 2 of 6) 13074 NM_001291825 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chr2-4784 chr2 36775024 36775234 + 9.54 0.000 intron (NM_001177970, intron 9 of 13) intron (NM_001177970, intron 9 of 13) 78422 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr1-5325 chr1 226530529 226530739 + 9.54 0.000 Intergenic Intergenic -18130 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr10-3554 chr10 78267510 78267720 + 9.54 0.000 intron (NR_073447, intron 1 of 2) intron (NR_073447, intron 1 of 2) 273 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr3-4248 chr3 141736573 141736783 + 9.54 0.000 Intergenic Intergenic -1531 NR_037702 9616 Hs.134623 NM_014245 ENSG00000114125 RNF7 CKBBP1|ROC2|SAG|rbx2 ring finger protein 7 protein-coding chr6-4732 chr6 65682978 65683188 + 9.54 0.000 intron (NM_001292009, intron 1 of 43) intron (NM_001292009, intron 1 of 43) 24142 NM_001292009 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding chrX-4970 chrX 114007585 114007795 + 9.54 0.000 Intergenic L1ME2z|LINE|L1 -69472 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr1-1883 chr1 153986215 153986425 + 9.54 0.000 promoter-TSS (NM_001272038) promoter-TSS (NM_001272038) 19 NM_002870 5872 Hs.151536 NM_002870 ENSG00000143545 RAB13 GIG4 RAB13, member RAS oncogene family protein-coding chr17-5258 chr17 18170171 18170381 + 9.54 0.000 intron (NM_016239, intron 61 of 64) MIRb|SINE|MIR -13552 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr1-13078 chr1 180652902 180653112 + 9.54 0.000 intron (NR_137330, intron 1 of 12) MLT1F|LTR|ERVL-MaLR 20985 NR_137330 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding chr12-8172 chr12 121835522 121835732 + 9.54 0.000 Intergenic AluSz|SINE|Alu 23232 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr5-8413 chr5 127223615 127223825 + 9.54 0.000 Intergenic Intergenic -67044 NM_001308121 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr10-2571 chr10 70760367 70760577 + 9.54 0.000 exon (NM_139155, exon 22 of 22) exon (NM_139155, exon 22 of 22) 22101 NR_134533 219793 Hs.386698 NM_152710 ENSG00000166220 TBATA C10orf27|SPATIAL thymus, brain and testes associated protein-coding chr5-3421 chr5 150267301 150267511 + 9.54 0.000 intron (NM_001369025, intron 2 of 17) MamRep4096|DNA|hAT-Tip100 22367 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chr11-2971 chr11 82718291 82718501 + 9.54 0.000 Intergenic Intergenic 15468 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr14-3102 chr14 64941115 64941325 + 9.54 0.000 intron (NR_046320, intron 1 of 2) AluJb|SINE|Alu 1525 NR_046321 2877 Hs.2704 NM_002083 ENSG00000176153 GPX2 GI-GPx|GPRP|GPRP-2|GPx-2|GPx-GI|GSHPX-GI|GSHPx-2 glutathione peroxidase 2 protein-coding chrX-4118 chrX 25822902 25823112 + 9.54 0.000 Intergenic L1M3|LINE|L1 -315336 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr13-2496 chr13 52203870 52204080 + 9.54 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat -9508 NR_051963 100887750 Hs.553878 NR_002816 ENSG00000243406 MRPS31P5 MRPS31P3 mitochondrial ribosomal protein S31 pseudogene 5 pseudo chr8-6419 chr8 58195982 58196192 + 9.54 0.000 Intergenic Intergenic 76014 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr1-6970 chr1 161189225 161189435 + 9.54 0.000 TTS (NM_001320336) TTS (NM_001320336) 9724 NM_001320336 9507 Hs.211604 NM_005099 ENSG00000158859 ADAMTS4 ADAMTS-2|ADAMTS-4|ADMP-1 ADAM metallopeptidase with thrombospondin type 1 motif 4 protein-coding chr12-4152 chr12 82193567 82193777 + 9.54 0.000 Intergenic HERVL-int|LTR|ERVL 164715 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr2-2462 chr2 101697355 101697565 + 9.54 0.000 promoter-TSS (NM_145687) promoter-TSS (NM_145687) -243 NM_145686 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr1-6595 chr1 37161638 37161848 + 9.54 0.000 TTS (NR_036217) TTS (NR_036217) 180 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chrX-2012 chrX 15146875 15147085 + 9.54 0.000 Intergenic Intergenic 123103 NM_001031739 140462 Hs.19404 NM_024087 ENSG00000102048 ASB9 - ankyrin repeat and SOCS box containing 9 protein-coding chr21-953 chr21 43849875 43850085 + 9.54 0.000 Intergenic Intergenic -15243 NM_001369881 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr2-3470 chr2 159866658 159866868 + 9.54 0.000 intron (NM_002349, intron 13 of 34) intron (NM_002349, intron 13 of 34) 37993 NM_002349 4065 Hs.153563 NM_002349 ENSG00000054219 LY75 CD205|CLEC13B|DEC-205|GP200-MR6|LY-75 lymphocyte antigen 75 protein-coding chr5-4524 chr5 14750045 14750255 + 9.54 0.000 intron (NM_054027, intron 5 of 11) intron (NM_054027, intron 5 of 11) 37456 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr17-4002 chr17 72587275 72587485 + 9.54 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 5424 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr8-924 chr8 19267563 19267773 + 9.54 0.000 Intergenic Intergenic -22146 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr21-1067 chr21 31269248 31269458 + 9.54 0.000 intron (NM_001353688, intron 4 of 29) intron (NM_001353688, intron 4 of 29) 75001 NM_001353694 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr6-2650 chr6 169691934 169692144 + 9.54 0.000 intron (NR_146876, intron 1 of 15) L1PBa|LINE|L1 9990 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr11-6924 chr11 109759708 109759918 + 9.54 0.000 Intergenic L1PA7|LINE|L1 -333579 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr1-5935 chr1 24144341 24144551 + 9.54 0.000 Intergenic LTR33A|LTR|ERVL -1306 NM_021258 58985 Hs.110915 NM_021258 ENSG00000142677 IL22RA1 CRF2-9|IL22R|IL22R1 interleukin 22 receptor subunit alpha 1 protein-coding chr9-3464 chr9 4460414 4460624 + 9.54 0.000 Intergenic Intergenic -29949 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr6-1661 chr6 155461607 155461817 + 9.54 0.000 Intergenic Intergenic -5873 NM_015718 50508 Hs.247776 NM_015718 ENSG00000074771 NOX3 GP91-3|MOX-2 NADPH oxidase 3 protein-coding chr9-8823 chr9 135059451 135059661 + 9.54 0.000 Intergenic Intergenic -15949 NM_006334 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr10-3160 chr10 76134032 76134242 + 9.54 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 351376 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr11-2730 chr11 12086268 12086478 + 9.54 0.000 Intergenic Intergenic -24203 NM_001282668 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr3-11005 chr3 180021749 180021959 + 9.54 0.000 intron (NM_016559, intron 1 of 14) intron (NM_016559, intron 1 of 14) 15083 NM_001256753 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr18-938 chr18 79318820 79319030 + 9.54 0.000 intron (NR_148360, intron 16 of 31) intron (NR_148360, intron 16 of 31) -77005 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr17-8174 chr17 61487793 61488003 + 9.54 0.000 Intergenic Intergenic 31410 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr15-2256 chr15 41863228 41863438 + 9.54 0.000 intron (NM_016642, intron 41 of 67) intron (NM_016642, intron 41 of 67) 3218 NR_036195 100423013 NR_036195 ENSG00000264850 MIR4310 - microRNA 4310 ncRNA chr12-4019 chr12 39505129 39505339 + 9.54 0.000 Intergenic Intergenic -62114 NM_001173465 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr14-4368 chr14 25394609 25394819 + 9.54 0.000 Intergenic Intergenic -344417 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr11-2627 chr11 12171136 12171346 + 9.54 0.000 intron (NR_144420, intron 3 of 27) intron (NR_144420, intron 3 of 27) 7558 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr1-5916 chr1 16251645 16251855 + 9.54 0.000 exon (NM_018994, exon 10 of 10) exon (NM_018994, exon 10 of 10) -14567 NM_030907 79363 Hs.546430 NM_030907 ENSG00000132881 CPLANE2 C1orf89|RSG1 ciliogenesis and planar polarity effector 2 protein-coding chr9-7233 chr9 2055464 2055674 + 9.54 0.000 intron (NM_001289397, intron 6 of 32) intron (NM_001289397, intron 6 of 32) 33624 NM_001289396 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr1-14941 chr1 86550174 86550384 + 9.54 0.000 intron (NM_012128, intron 1 of 13) intron (NM_012128, intron 1 of 13) 3201 NR_024602 22802 Hs.567422 NM_012128 ENSG00000016602 CLCA4 CaCC|CaCC2 chloride channel accessory 4 protein-coding chr13-1112 chr13 20130337 20130547 + 9.54 0.000 Intergenic THE1B|LTR|ERVL-MaLR 27741 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr2-3701 chr2 218079520 218079730 + 9.54 0.000 intron (NR_034176, intron 11 of 13) L2a|LINE|L2 10610 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr6-6114 chr6 155850742 155850952 + 9.54 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -95950 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr2-7583 chr2 25313815 25314025 + 9.54 0.000 exon (NM_175630, exon 2 of 4) exon (NM_175630, exon 2 of 4) 14801 NR_031570 100302246 NR_031570 ENSG00000221445 MIR1301 MIRN1301|hsa-mir-1301|mir-1301 microRNA 1301 ncRNA chr3-10406 chr3 130068435 130068645 + 9.54 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -13291 NM_001136152 644974 Hs.722197 NM_001136152 ENSG00000251287 ALG1L2 - ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2 protein-coding chr5-5093 chr5 98249055 98249265 + 9.54 0.000 Intergenic Intergenic -87921 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr3-2122 chr3 60973545 60973755 + 9.54 0.000 intron (NR_148922, intron 3 of 3) intron (NR_148922, intron 3 of 3) 277802 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr6-4381 chr6 22332774 22332984 + 9.54 0.000 Intergenic Intergenic -30044 NM_001163558 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr22-3289 chr22 48718808 48719018 + 9.54 0.000 intron (NM_001082967, intron 3 of 3) intron (NM_001082967, intron 3 of 3) -61382 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr17-4853 chr17 62414338 62414548 + 9.54 0.000 intron (NM_001144933, intron 11 of 11) L2c|LINE|L2 -9442 NM_181725 339175 Hs.381204 NM_181725 ENSG00000087995 METTL2A METTL2 methyltransferase like 2A protein-coding chr5-3568 chr5 64838415 64838625 + 9.54 0.000 intron (NM_005869, intron 10 of 13) LTR86A1|LTR|ERVL 69590 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr10-4818 chr10 11480577 11480787 + 9.54 0.000 intron (NM_014688, intron 14 of 14) intron (NM_014688, intron 14 of 14) 51598 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr1-6925 chr1 153259895 153260105 + 9.54 0.000 intron (NM_000427, intron 1 of 1) intron (NM_000427, intron 1 of 1) 313 NM_000427 4014 Hs.251680 NM_000427 ENSG00000203782 LOR - loricrin protein-coding chr3-5663 chr3 12395523 12395733 + 9.54 0.000 intron (NM_001354669, intron 5 of 6) intron (NM_001354669, intron 5 of 6) 44126 NM_015869 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr12-8139 chr12 120703805 120704015 + 9.54 0.000 Intergenic MIRb|SINE|MIR -6548 NM_001080533 84747 Hs.127610 NM_032661 ENSG00000175970 UNC119B POC7B unc-119 lipid binding chaperone B protein-coding chr6-1949 chr6 125780721 125780931 + 9.54 0.000 promoter-TSS (NM_001199619) promoter-TSS (NM_001199619) -289 NM_001199620 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr14-3246 chr14 76436726 76436936 + 9.54 0.000 intron (NM_004452, intron 3 of 10) intron (NM_004452, intron 3 of 10) 65484 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr2-5805 chr2 231153159 231153369 + 9.54 0.000 intron (NM_001191037, intron 18 of 23) intron (NM_001191037, intron 18 of 23) -28222 NM_001320758 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chr14-1436 chr14 76337669 76337879 + 9.54 0.000 Intergenic Intergenic -33573 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr8-4167 chr8 78717718 78717928 + 9.54 0.000 non-coding (NR_156423, exon 11 of 11) non-coding (NR_156423, exon 11 of 11) 6551 NR_077236 101241902 Hs.388511 NR_077236 LOC101241902 - chromosome 4 open reading frame 46 pseudogene pseudo chr1-12688 chr1 49199576 49199786 + 9.54 0.000 intron (NM_001323575, intron 4 of 12) L3|LINE|CR1 -57730 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr11-6246 chr11 50109298 50109508 + 9.54 0.000 Intergenic L2a|LINE|L2 76529 NM_001005513 403257 Hs.554533 NM_001005513 ENSG00000260811 OR4C45 - olfactory receptor family 4 subfamily C member 45 (gene/pseudogene) protein-coding chr16-5042 chr16 59593507 59593717 + 9.54 0.000 Intergenic Intergenic 161579 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr9-2534 chr9 125545000 125545210 + 9.54 0.000 intron (NM_001006619, intron 6 of 10) intron (NM_001006619, intron 6 of 10) 162103 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr3-7964 chr3 169107612 169107822 + 9.54 0.000 intron (NM_001163999, intron 8 of 14) intron (NM_001163999, intron 8 of 14) 37806 NM_001366472 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr21-798 chr21 45912254 45912464 + 9.54 0.000 intron (NM_001130141, intron 7 of 12) intron (NM_001130141, intron 7 of 12) -60611 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr4-8000 chr4 116078194 116078404 + 9.54 0.000 Intergenic Intergenic -221426 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr1-16685 chr1 244923509 244923719 + 9.54 0.000 Intergenic Intergenic -46255 NM_032328 84288 Hs.134857 NM_032328 ENSG00000203666 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding chr7-6002 chr7 103961588 103961798 + 9.54 0.000 intron (NM_005045, intron 1 of 64) MIRb|SINE|MIR 27823 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr4-3250 chr4 85866408 85866618 + 9.54 0.000 intron (NM_001287805, intron 1 of 7) intron (NM_001287805, intron 1 of 7) 38576 NM_001287805 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr18-1433 chr18 13971410 13971620 + 9.54 0.000 Intergenic Intergenic -55808 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding chr3-9106 chr3 28901087 28901297 + 9.54 0.000 Intergenic Intergenic 325914 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr6-1187 chr6 149844231 149844441 + 9.54 0.000 intron (NM_032832, intron 2 of 6) intron (NM_032832, intron 2 of 6) -19162 NR_045126 100652739 Hs.642734 NR_045126 ENSG00000223701 RAET1E-AS1 RAET1G-AS1 RAET1E antisense RNA 1 ncRNA chr6-5841 chr6 35091533 35091743 + 9.54 0.000 TTS (NM_015245) TTS (NM_015245) 49701 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr2-6767 chr2 43971461 43971671 + 9.54 0.000 intron (NM_133259, intron 11 of 37) intron (NM_133259, intron 11 of 37) 24423 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr11-7339 chr11 65683223 65683433 + 9.54 0.000 Intergenic LTR49-int|LTR|ERV1 -20356 NM_001243985 5970 Hs.502875 NM_021975 ENSG00000173039 RELA CMCU|NFKB3|p65 RELA proto-oncogene, NF-kB subunit protein-coding chr5-4788 chr5 56466263 56466473 + 9.54 0.000 intron (NR_104664, intron 2 of 4) LTR16C|LTR|ERVL 15401 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr1-12440 chr1 13829816 13830026 + 9.54 0.000 Intergenic L2b|LINE|L2 80506 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr7-4971 chr7 150923937 150924147 + 9.54 0.000 Intergenic Intergenic 31762 NM_001204798 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chr2-3352 chr2 222305710 222305920 + 9.54 0.000 TTS (NR_161172) TTS (NR_161172) -6817 NM_181457 5077 Hs.42146 NM_000438 ENSG00000135903 PAX3 CDHS|HUP2|WS1|WS3 paired box 3 protein-coding chr5-6722 chr5 72487139 72487349 + 9.54 0.000 intron (NM_152625, intron 1 of 4) intron (NM_152625, intron 1 of 4) 20166 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr2-7976 chr2 64793179 64793389 + 9.54 0.000 Intergenic Intergenic 70347 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr5-6581 chr5 25973635 25973845 + 9.54 0.000 Intergenic AluSg|SINE|Alu 782787 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr13-2350 chr13 35765354 35765564 + 9.54 0.000 Intergenic Intergenic 67732 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr11-4511 chr11 117097623 117097833 + 9.54 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 700 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr7-7514 chr7 103064050 103064260 + 9.54 0.000 intron (NR_105043, intron 1 of 20) intron (NR_105043, intron 1 of 20) 10413 NM_145032 222235 Hs.660029 NM_145032 ENSG00000161040 FBXL13 DRC6|Fbl13 F-box and leucine rich repeat protein 13 protein-coding chr15-2285 chr15 60261083 60261293 + 9.54 0.000 Intergenic MIR|SINE|MIR 136798 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chrX-1869 chrX 119325531 119325741 + 9.54 0.000 intron (NR_110396, intron 2 of 3) intron (NR_110396, intron 2 of 3) 34107 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr20-2708 chr20 47817791 47818001 + 9.54 0.000 Intergenic Intergenic -31280 NM_001161841 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr4-7696 chr4 88434577 88434787 + 9.54 0.000 intron (NM_001165136, intron 16 of 21) MIR|SINE|MIR -22437 NM_016323 51191 Hs.26663 NM_016323 ENSG00000138646 HERC5 CEB1|CEBP1 HECT and RLD domain containing E3 ubiquitin protein ligase 5 protein-coding chr5-1381 chr5 107303731 107303941 + 9.54 0.000 Intergenic Intergenic -292822 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr19-950 chr19 991555 991765 + 9.54 0.000 intron (NM_024100, intron 7 of 9) intron (NM_024100, intron 7 of 9) 7332 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr20-1481 chr20 10541262 10541472 + 9.54 0.000 intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 106062 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr6-3210 chr6 135346759 135346969 + 9.54 0.000 intron (NM_017651, intron 23 of 27) intron (NM_017651, intron 23 of 27) 107704 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr8-2691 chr8 93819780 93819990 + 9.54 0.000 TTS (NR_024522) TTS (NR_024522) 64991 NR_024522 91147 Hs.116240 NM_153704 ENSG00000164953 TMEM67 JBTS6|MECKELIN|MKS3|NPHP11|TNEM67 transmembrane protein 67 protein-coding chr7-2258 chr7 1068205 1068415 + 9.54 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) 12940 NM_001303474 115330 Hs.585007 NM_138445 ENSG00000164849 GPR146 PGR8 G protein-coupled receptor 146 protein-coding chrX-709 chrX 101088889 101089099 + 9.54 0.000 intron (NM_021637, intron 1 of 1) intron (NM_021637, intron 1 of 1) -9188 NM_001318521 2491 Hs.348920 NM_006733 ENSG00000102384 CENPI CENP-I|FSHPRH1|LRPR1 centromere protein I protein-coding chr3-6462 chr3 107061383 107061593 + 9.54 0.000 Intergenic Intergenic 179150 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr16-6361 chr16 50848761 50848971 + 9.54 0.000 Intergenic Tigger12A|DNA|TcMar-Tigger -29907 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chr22-1825 chr22 36585983 36586193 + 9.54 0.000 intron (NM_006078, intron 2 of 3) intron (NM_006078, intron 2 of 3) -56922 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr10-3441 chr10 45670026 45670236 + 9.54 0.000 intron (NR_104256, intron 1 of 6) L1PA6|LINE|L1 2601 NM_001282905 93550 Hs.89029 NM_174890 ENSG00000172671 ZFAND4 ANUBL1 zinc finger AN1-type containing 4 protein-coding chr15-2679 chr15 78265797 78266007 + 9.54 0.000 promoter-TSS (NM_001130183) promoter-TSS (NM_001130183) -316 NM_001130183 55466 Hs.513053 NM_018602 ENSG00000140403 DNAJA4 MST104|MSTP104|PRO1472 DnaJ heat shock protein family (Hsp40) member A4 protein-coding chr4-1838 chr4 121633486 121633696 + 9.54 0.000 Intergenic Intergenic 63389 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr9-6556 chr9 119841984 119842194 + 9.54 0.000 Intergenic L2c|LINE|L2 -92971 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr15-2187 chr15 87711007 87711217 + 9.54 0.000 Intergenic Intergenic 134183 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr9-3711 chr9 111016661 111016871 + 9.54 0.000 intron (NM_001351399, intron 1 of 5) L4_A_Mam|LINE|RTE-X 20014 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr4-3598 chr4 6405115 6405325 + 9.54 0.000 intron (NM_001206994, intron 2 of 9) MIRb|SINE|MIR 15898 NM_001206996 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr9-4419 chr9 6780813 6781023 + 9.54 0.000 intron (NR_148680, intron 1 of 21) intron (NR_148680, intron 1 of 21) 23568 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr3-9805 chr3 73298345 73298555 + 9.54 0.000 Intergenic Intergenic 135545 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr7-3580 chr7 23523954 23524164 + 9.54 0.000 intron (NM_001282757, intron 1 of 8) intron (NM_001282757, intron 1 of 8) 7922 NM_001362760 29896 Hs.445652 NM_013293 ENSG00000164548 TRA2A AWMS1|HSU53209 transformer 2 alpha homolog protein-coding chr13-1497 chr13 113080463 113080673 + 9.54 0.000 intron (NM_001366646, intron 13 of 27) intron (NM_001366646, intron 13 of 27) -25220 NM_000131 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr6-6847 chr6 8529565 8529775 + 9.54 0.000 intron (NR_038980, intron 2 of 4) intron (NR_038980, intron 2 of 4) 94047 NR_038980 100506207 Hs.311049 NR_038979 ENSG00000285219 LOC100506207 - uncharacterized LOC100506207 ncRNA chr10-1248 chr10 95656740 95656950 + 9.54 0.000 promoter-TSS (NM_001323417) promoter-TSS (NM_001323417) -134 NM_001323414 5832 Hs.500645 NM_002860 ENSG00000059573 ALDH18A1 ADCL3|ARCL3A|GSAS|P5CS|PYCS|SPG9|SPG9A|SPG9B aldehyde dehydrogenase 18 family member A1 protein-coding chr10-8009 chr10 61975527 61975737 + 9.54 0.000 intron (NM_032199, intron 3 of 9) MIRc|SINE|MIR -73725 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr12-5249 chr12 109110154 109110364 + 9.54 0.000 3' UTR (NM_080911, exon 7 of 7) 3' UTR (NM_080911, exon 7 of 7) -6328 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr9-1267 chr9 133089535 133089745 + 9.54 0.000 Intergenic MER51E|LTR|ERV1 7101 NR_001275 1057 Hs.654361 NR_001275 ENSG00000170827 CELP CELL|cell1|cell2|cell3 carboxyl ester lipase pseudogene pseudo chr7-4300 chr7 25562274 25562484 + 9.54 0.000 Intergenic MIRc|SINE|MIR 100761 NR_157828 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr6-3546 chr6 44036354 44036564 + 9.54 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) -32809 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr3-7455 chr3 129972594 129972804 + 9.54 0.000 Intergenic L1ME4b|LINE|L1 -2021 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr10-6824 chr10 18504082 18504292 + 9.54 0.000 intron (NM_201593, intron 5 of 13) MIRb|SINE|MIR 103612 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr19-2788 chr19 46878585 46878795 + 9.54 0.000 intron (NM_004491, intron 1 of 6) AluJb|SINE|Alu 17693 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr10-2878 chr10 97775084 97775294 + 9.54 0.000 Intergenic Intergenic -3190 NM_003015 6425 Hs.279565 NM_003015 ENSG00000120057 SFRP5 SARP3 secreted frizzled related protein 5 protein-coding chr2-9113 chr2 206751527 206751737 + 9.54 0.000 intron (NR_138468, intron 4 of 11) L2a|LINE|L2 13696 NR_104261 130752 Hs.147816 NM_206892 ENSG00000138400 MDH1B RP11-95H11 malate dehydrogenase 1B protein-coding chr2-4206 chr2 202529218 202529428 + 9.54 0.000 intron (NM_001204, intron 7 of 12) intron (NM_001204, intron 7 of 12) -105646 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr13-2817 chr13 102972306 102972516 + 9.54 0.000 Intergenic L1PB3|LINE|L1 92312 NR_026965 121952 Hs.660773 NR_026965 ENSG00000250878 METTL21EP METTL21CP1 methyltransferase like 21E, pseudogene pseudo chr7-7947 chr7 10859957 10860167 + 9.54 0.000 Intergenic Intergenic 80091 NM_002489 4697 Hs.50098 NM_002489 ENSG00000189043 NDUFA4 CI-9k|CI-MLRQ|COXFA4|MLRQ NDUFA4 mitochondrial complex associated protein-coding chr11-3807 chr11 65953641 65953851 + 9.54 0.000 intron (NM_152762, intron 5 of 7) intron (NM_152762, intron 5 of 7) -7988 NM_005146 9092 Hs.502883 NM_005146 ENSG00000175467 SART1 Ara1|HAF|HOMS1|SART1259|SNRNP110|Snu66 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP protein-coding chr11-4028 chr11 9535314 9535524 + 9.54 0.000 Intergenic Intergenic -38251 NM_003390 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr15-2904 chr15 43229251 43229461 + 9.54 0.000 Intergenic Intergenic -8231 NM_001114134 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chr8-4821 chr8 18027779 18027989 + 9.54 0.000 non-coding (NR_148032, exon 39 of 39) non-coding (NR_148032, exon 39 of 39) 55312 NM_001363743 427 Hs.527412 NM_004315 ENSG00000104763 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase 1 protein-coding chr1-13849 chr1 20307423 20307633 + 9.54 0.000 intron (NM_001039500, intron 1 of 21) MIRb|SINE|MIR 16653 NM_001039500 127731 Hs.205178 NM_144623 ENSG00000158816 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding chr1-7198 chr1 214401560 214401770 + 9.54 0.000 intron (NM_005401, intron 7 of 18) intron (NM_005401, intron 7 of 18) 120506 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr17-7644 chr17 29287005 29287215 + 9.54 0.000 exon (NM_020772, exon 2 of 4) exon (NM_020772, exon 2 of 4) 7038 NM_020772 57532 Hs.462598 NM_020772 ENSG00000108256 NUFIP2 182-FIP|82-FIP|FIP-82|PIG1 nuclear FMR1 interacting protein 2 protein-coding chr2-3957 chr2 68062515 68062725 + 9.54 0.000 intron (NM_001190263, intron 1 of 5) intron (NM_001190263, intron 1 of 5) 384 NM_001190263 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding chr4-8525 chr4 163064879 163065089 + 9.54 0.000 Intergenic Intergenic 28644 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-1860 chr7 6256118 6256328 + 9.54 0.000 intron (NM_001367581, intron 1 of 13) intron (NM_001367581, intron 1 of 13) 16401 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr13-3666 chr13 33497466 33497676 + 9.54 0.000 intron (NM_001243476, intron 4 of 17) intron (NM_001243476, intron 4 of 17) -162305 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr14-4892 chr14 72175115 72175325 + 9.54 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 241693 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr12-2463 chr12 57208547 57208757 + 9.54 0.000 intron (NM_002332, intron 77 of 88) intron (NM_002332, intron 77 of 88) -8142 NM_007224 11247 Hs.745023 NM_007224 ENSG00000182379 NXPH4 NPH4 neurexophilin 4 protein-coding chr12-5196 chr12 105190629 105190839 + 9.54 0.000 intron (NM_001251904, intron 14 of 20) intron (NM_001251904, intron 14 of 20) 42671 NM_001251905 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr19-5850 chr19 42776980 42777190 + 9.54 0.000 Intergenic LTR13|LTR|ERVK -11407 NM_182707 440533 Hs.466843 NM_182707 ENSG00000124467 PSG8 PSG1 pregnancy specific beta-1-glycoprotein 8 protein-coding chr9-7282 chr9 7688773 7688983 + 9.54 0.000 Intergenic L2a|LINE|L2 110900 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr10-6087 chr10 131613794 131614004 + 9.54 0.000 Intergenic L1MC4|LINE|L1 176300 NR_038365 399827 Hs.523353 NM_001001677 ENSG00000189275 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA chr17-2361 chr17 69539795 69540005 + 9.54 0.000 intron (NM_001330450, intron 11 of 11) intron (NM_001330450, intron 11 of 11) 37638 NM_001330450 5608 Hs.49329 NM_002758 ENSG00000108984 MAP2K6 MAPKK6|MEK6|MKK6|PRKMK6|SAPKK-3|SAPKK3 mitogen-activated protein kinase kinase 6 protein-coding chr8-3466 chr8 96903479 96903689 + 9.54 0.000 intron (NM_016134, intron 4 of 7) MIRb|SINE|MIR 258342 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr6-7077 chr6 33811296 33811506 + 9.54 0.000 Intergenic Intergenic -7398 NM_001040109 4295 Hs.2813 NM_002418 ENSG00000096395 MLN - motilin protein-coding chr18-3161 chr18 42443561 42443771 + 9.54 0.000 intron (NR_046174, intron 4 of 9) intron (NR_046174, intron 4 of 9) 256998 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr6-6304 chr6 42971300 42971510 + 9.54 0.000 intron (NM_001316313, intron 3 of 16) intron (NM_001316313, intron 3 of 16) 7776 NM_000287 5190 Hs.656425 NM_000287 ENSG00000124587 PEX6 HMLR2|PAF-2|PAF2|PBD4A|PDB4B|PXAAA1 peroxisomal biogenesis factor 6 protein-coding chr20-4331 chr20 53416204 53416414 + 9.54 0.000 intron (NM_173485, intron 2 of 2) intron (NM_173485, intron 2 of 2) -136461 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr6-7836 chr6 104279813 104280023 + 9.54 0.000 Intergenic L2a|LINE|L2 579628 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr11-3891 chr11 106276941 106277151 + 9.54 0.000 Intergenic L1PA16|LINE|L1 25639 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr20-1193 chr20 4926791 4927001 + 9.54 0.000 intron (NM_005116, intron 3 of 16) intron (NM_005116, intron 3 of 16) 74614 NM_005116 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr17-5501 chr17 42011410 42011620 + 9.54 0.000 intron (NM_003315, intron 1 of 13) intron (NM_003315, intron 1 of 13) 5650 NM_001144766 7266 Hs.500156 NM_003315 ENSG00000168259 DNAJC7 DJ11|DJC7|TPR2|TTC2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding chr16-2945 chr16 4159623 4159833 + 9.54 0.000 Intergenic Intergenic -43286 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr3-2270 chr3 61315971 61316181 + 9.54 0.000 Intergenic LTR16E1|LTR|ERVL -64615 NR_148921 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr12-3777 chr12 52650771 52650981 + 9.54 0.000 intron (NM_000423, intron 1 of 8) intron (NM_000423, intron 1 of 8) 1335 NM_000423 3849 Hs.707 NM_000423 ENSG00000172867 KRT2 CK-2e|K2e|KRT2A|KRT2E|KRTE keratin 2 protein-coding chr16-2018 chr16 4065153 4065363 + 9.54 0.000 intron (NM_001116, intron 2 of 10) intron (NM_001116, intron 2 of 10) 51184 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr4-7099 chr4 33493236 33493446 + 9.54 0.000 Intergenic MER1A|DNA|hAT-Charlie 546552 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr6-3468 chr6 1911497 1911707 + 9.54 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 264389 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chrX-5400 chrX 152577079 152577289 + 9.54 0.000 Intergenic MER2|DNA|TcMar-Tigger -60711 NM_018558 55879 Hs.283081 NM_018558 ENSG00000268089 GABRQ THETA gamma-aminobutyric acid type A receptor theta subunit protein-coding chr5-6803 chr5 97300980 97301190 + 9.54 0.000 Intergenic LTR12C|LTR|ERV1 -117838 NM_018343 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding chr2-7542 chr2 23058335 23058545 + 9.54 0.000 Intergenic Intergenic -326739 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr11-2706 chr11 121024260 121024470 + 9.54 0.000 intron (NM_152715, intron 1 of 7) CpG 293 NM_001363644 219899 Hs.504136 NM_152715 ENSG00000154114 TBCEL El|LRRC35 tubulin folding cofactor E like protein-coding chr8-2551 chr8 30216106 30216316 + 9.54 0.000 Intergenic Intergenic 59842 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr11-2425 chr11 14455362 14455572 + 9.54 0.000 Intergenic Intergenic 44391 NM_016451 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr17-2325 chr17 50101641 50101851 + 9.54 0.000 intron (NM_002611, intron 2 of 10) intron (NM_002611, intron 2 of 10) 6051 NM_001199899 5164 Hs.256667 NM_002611 ENSG00000005882 PDK2 PDHK2|PDKII pyruvate dehydrogenase kinase 2 protein-coding chr5-2530 chr5 169096152 169096362 + 9.54 0.000 intron (NM_003062, intron 4 of 35) L1ME3G|LINE|L1 83030 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr4-7301 chr4 53899922 53900132 + 9.54 0.000 Intergenic Intergenic 87255 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr16-4167 chr16 7723378 7723588 + 9.54 0.000 Intergenic AluJr4|SINE|Alu 390638 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr6-2291 chr6 88076530 88076740 + 9.54 0.000 Intergenic Intergenic 28794 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr1-15807 chr1 177709151 177709361 + 9.54 0.000 intron (NR_110722, intron 3 of 3) MIRc|SINE|MIR 8732 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr18-1120 chr18 79439213 79439423 + 9.54 0.000 intron (NM_001278672, intron 3 of 8) intron (NM_001278672, intron 3 of 8) 39019 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr7-7006 chr7 124119896 124120106 + 9.54 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -86934 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr6-4198 chr6 3432235 3432445 + 9.54 0.000 intron (NM_021945, intron 1 of 10) intron (NM_021945, intron 1 of 10) 12673 NM_021945 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr19-2827 chr19 57614200 57614410 + 9.54 0.000 promoter-TSS (NM_003435) promoter-TSS (NM_003435) 63 NM_003435 7693 Hs.469694 NM_003435 ENSG00000213762 ZNF134 pHZ-15 zinc finger protein 134 protein-coding chr11-3359 chr11 122829363 122829573 + 9.54 0.000 Intergenic HERVH-int|LTR|ERV1 -9032 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr10-7240 chr10 124505707 124505917 + 9.54 0.000 intron (NM_001167880, intron 5 of 5) intron (NM_001167880, intron 5 of 5) 43989 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr17-1326 chr17 2853457 2853667 + 9.54 0.000 intron (NM_001330058, intron 2 of 24) CpG 57124 NM_001100398 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr2-4156 chr2 177161827 177162037 + 9.54 0.000 Intergenic UCON4|Unknown|Unknown 50479 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr1-11509 chr1 154405965 154406175 + 9.54 0.000 intron (NM_001206866, intron 1 of 6) intron (NM_001206866, intron 1 of 6) 494 NR_147855 101928101 Hs.617089 NR_147855 ENSG00000228013 IL6R-AS1 - IL6R antisense RNA 1 ncRNA chr17-2611 chr17 82116197 82116407 + 9.54 0.000 intron (NM_001367828, intron 16 of 16) intron (NM_001367828, intron 16 of 16) -18066 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr1-6880 chr1 117250217 117250427 + 9.54 0.000 Intergenic MSTB|LTR|ERVL-MaLR -39362 NM_001253850 79679 Hs.546434 NM_024626 ENSG00000134258 VTCN1 B7-H4|B7H4|B7S1|B7X|B7h.5|PRO1291|VCTN1 V-set domain containing T cell activation inhibitor 1 protein-coding chr7-4893 chr7 122651835 122652045 + 9.54 0.000 intron (NM_001167940, intron 3 of 29) L2c|LINE|L2 47177 NM_139175 168433 Hs.126730 NM_139175 ENSG00000188050 RNF133 - ring finger protein 133 protein-coding chr12-2691 chr12 98397434 98397644 + 9.54 0.000 Intergenic Intergenic 59606 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr3-8644 chr3 174827774 174827984 + 9.54 0.000 Intergenic Intergenic -31455 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr9-6012 chr9 135412554 135412764 + 9.54 0.000 Intergenic CpG 59590 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr3-4953 chr3 10487824 10488034 + 9.54 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) 17655 NM_001363862 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr2-6989 chr2 136587232 136587442 + 9.54 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -178208 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr5-5144 chr5 106185670 106185880 + 9.54 0.000 Intergenic AluJb|SINE|Alu 825239 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr1-10079 chr1 94232388 94232598 + 9.54 0.000 intron (NM_001328664, intron 1 of 22) intron (NM_001328664, intron 1 of 22) 5091 NM_004815 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr16-3925 chr16 84558546 84558756 + 9.54 0.000 Intergenic Intergenic -53992 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr17-2862 chr17 30820010 30820220 + 9.54 0.000 intron (NM_015986, intron 1 of 7) intron (NM_015986, intron 1 of 7) 4577 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr8-7013 chr8 109526421 109526631 + 9.54 0.000 intron (NM_177531, intron 76 of 77) intron (NM_177531, intron 76 of 77) -13174 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding chr1-11047 chr1 223717154 223717364 + 9.54 0.000 intron (NM_001748, intron 1 of 20) intron (NM_001748, intron 1 of 20) 4720 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr11-10059 chr11 84296453 84296663 + 9.54 0.000 intron (NM_001142699, intron 7 of 27) AluJr|SINE|Alu 20781 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chrX-1552 chrX 46758441 46758651 + 9.54 0.000 intron (NM_001257291, intron 1 of 16) intron (NM_001257291, intron 1 of 16) 572 NM_001257291 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr11-5587 chr11 110175261 110175471 + 9.54 0.000 intron (NM_001260493, intron 15 of 15) intron (NM_001260493, intron 15 of 15) 81974 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding KI270728.1-5 KI270728.1 1771822 1772032 + 9.54 0.000 NA NA NA NA chr9-7502 chr9 32159534 32159744 + 9.54 0.000 Intergenic Intergenic -224964 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr4-7378 chr4 60991925 60992135 + 9.54 0.000 Intergenic Intergenic 69411 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr22-2853 chr22 44728349 44728559 + 9.54 0.000 intron (NM_181334, intron 4 of 14) L2b|LINE|L2 -24104 NM_001017526 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr16-2963 chr16 10123238 10123448 + 9.54 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 58724 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr9-7348 chr9 15041503 15041713 + 9.54 0.000 Intergenic Intergenic 48281 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr9-3714 chr9 111805888 111806098 + 9.54 0.000 Intergenic Intergenic -11056 NR_109816 158401 Hs.428209 NM_173521 ENSG00000165181 SHOC1 C9orf84|ZIP2|ZIP2H shortage in chiasmata 1 protein-coding chr2-7094 chr2 174605809 174606019 + 9.54 0.000 intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) 28691 NM_003387 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr2-7550 chr2 23655699 23655909 + 9.54 0.000 intron (NM_052920, intron 5 of 13) intron (NM_052920, intron 5 of 13) 270625 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr4-2551 chr4 79165177 79165387 + 9.54 0.000 intron (NR_038342, intron 3 of 5) intron (NR_038342, intron 3 of 5) 160779 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr14-3646 chr14 75377003 75377213 + 9.54 0.000 Intergenic Intergenic -50616 NM_001135047 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chr11-2510 chr11 68950375 68950585 + 9.54 0.000 Intergenic Intergenic 30506 NM_198923 116512 Hs.527802 NM_198923 ENSG00000172938 MRGPRD MRGD|TGR7 MAS related GPR family member D protein-coding chr2-10351 chr2 164656765 164656975 + 9.54 0.000 Intergenic Intergenic 30907 NR_033309 100337591 Hs.664357 NR_033309 ENSG00000206869 SNORA70F U70F small nucleolar RNA, H/ACA box 70F snoRNA chr16-2063 chr16 78646969 78647179 + 9.54 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 547420 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr3-9566 chr3 53705548 53705758 + 9.54 0.000 intron (NM_001128840, intron 9 of 47) intron (NM_001128840, intron 9 of 47) 140766 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr11-4499 chr11 113618244 113618454 + 9.54 0.000 Intergenic Intergenic 87959 NM_001288752 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding chr14-1624 chr14 103123882 103124092 + 9.54 0.000 intron (NM_001371220, intron 1 of 12) intron (NM_001371220, intron 1 of 12) 526 NM_001371221 chr4-4529 chr4 67795728 67795938 + 9.54 0.000 Intergenic Intergenic -39747 NM_000406 2798 Hs.407587 NM_000406 ENSG00000109163 GNRHR GNRHR1|GRHR|HH7|LHRHR|LRHR gonadotropin releasing hormone receptor protein-coding chr2-13591 chr2 157312782 157312992 + 9.54 0.000 3' UTR (NM_014568, exon 10 of 10) 3' UTR (NM_014568, exon 10 of 10) 12937 NM_020711 57471 Hs.443894 NM_020711 ENSG00000136541 ERMN JN|KIAA1189 ermin protein-coding chr11-9034 chr11 26649821 26650031 + 9.54 0.000 intron (NM_031418, intron 24 of 26) intron (NM_031418, intron 24 of 26) 72134 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr1-8372 chr1 67316589 67316799 + 9.54 0.000 intron (NM_001319233, intron 2 of 15) L2b|LINE|L2 9330 NM_001258215 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr5-4310 chr5 151745514 151745724 + 9.54 0.000 intron (NM_004045, intron 3 of 3) intron (NM_004045, intron 3 of 3) 13012 NM_004045 475 Hs.125213 NM_004045 ENSG00000177556 ATOX1 ATX1|HAH1 antioxidant 1 copper chaperone protein-coding chr12-2386 chr12 27190918 27191128 + 9.54 0.000 Intergenic Intergenic -53263 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr18-3160 chr18 42415163 42415373 + 9.54 0.000 intron (NR_046174, intron 4 of 9) intron (NR_046174, intron 4 of 9) 228600 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr12-4563 chr12 28738859 28739069 + 9.54 0.000 Intergenic Intergenic -410314 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr10-8447 chr10 86341373 86341583 + 9.54 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 25317 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr3-5935 chr3 44090147 44090357 + 9.54 0.000 Intergenic L1MEi|LINE|L1 -23960 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr8-4635 chr8 133552030 133552240 + 9.54 0.000 intron (NM_003033, intron 1 of 8) L2b|LINE|L2 19752 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr8-1971 chr8 69834820 69835030 + 9.54 0.000 promoter-TSS (NM_030958) promoter-TSS (NM_030958) 53 NM_030958 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr10-3860 chr10 28730512 28730722 + 9.54 0.000 Intergenic Intergenic -13033 NR_120652 101929218 Hs.224866 NR_120652 LINC01517 - long intergenic non-protein coding RNA 1517 ncRNA chr11-3559 chr11 43959448 43959658 + 9.54 0.000 Intergenic Intergenic 16916 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr20-1589 chr20 4309890 4310100 + 9.54 0.000 Intergenic Intergenic -60708 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr7-2596 chr7 137760152 137760362 + 9.54 0.000 intron (NM_001321708, intron 1 of 32) intron (NM_001321708, intron 1 of 32) 86075 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr1-5291 chr1 213905219 213905429 + 9.54 0.000 intron (NR_037850, intron 2 of 5) intron (NR_037850, intron 2 of 5) -19425 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr1-13107 chr1 190799039 190799249 + 9.54 0.000 intron (NR_033922, intron 4 of 4) intron (NR_033922, intron 4 of 4) 174254 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA chr8-1500 chr8 53843071 53843281 + 9.54 0.000 promoter-TSS (NM_015941) promoter-TSS (NM_015941) 69 NM_015941 51606 Hs.491737 NM_015941 ENSG00000047249 ATP6V1H CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase H+ transporting V1 subunit H protein-coding chr4-6986 chr4 22155345 22155555 + 9.54 0.000 Intergenic THE1C|LTR|ERVL-MaLR 184216 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr5-3665 chr5 158155066 158155276 + 9.54 0.000 Intergenic Intergenic 254602 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr8-2894 chr8 142567610 142567820 + 9.54 0.000 Intergenic G-rich|Low_complexity|Low_complexity 46764 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr7-5982 chr7 101820195 101820405 + 9.54 0.000 intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 2674 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr7-4441 chr7 123423073 123423283 + 9.54 0.000 Intergenic L1PBa|LINE|L1 109770 NM_001282855 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr9-4997 chr9 22084737 22084947 + 9.54 0.000 intron (NR_003529, intron 12 of 18) intron (NR_003529, intron 12 of 18) -75529 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr9-4977 chr9 18921736 18921946 + 9.54 0.000 Intergenic Intergenic 111368 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr6-7402 chr6 51609493 51609703 + 9.54 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -12272 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr3-6243 chr3 67649122 67649332 + 9.54 0.000 intron (NM_001177599, intron 1 of 10) intron (NM_001177599, intron 1 of 10) 5387 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr17-5711 chr17 56451819 56452029 + 9.54 0.000 intron (NM_001370326, intron 11 of 20) intron (NM_001370326, intron 11 of 20) -141775 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr2-1965 chr2 241637235 241637445 + 9.54 0.000 promoter-TSS (NM_178326) promoter-TSS (NM_178326) -182 NM_015963 51078 Hs.435759 NM_015963 ENSG00000176946 THAP4 CGI-36|Nb(III)|PP238 THAP domain containing 4 protein-coding chr19-5846 chr19 42229830 42230040 + 9.54 0.000 TTS (NM_019884) TTS (NM_019884) 9623 NM_001314033 116115 Hs.137282 NM_133444 ENSG00000167625 ZNF526 - zinc finger protein 526 protein-coding chr10-1804 chr10 110304432 110304642 + 9.54 0.000 intron (NM_005871, intron 1 of 5) CpG 383 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr1-7278 chr1 236036097 236036307 + 9.54 0.000 intron (NM_002508, intron 5 of 19) intron (NM_002508, intron 5 of 19) 28888 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr5-4043 chr5 40384487 40384697 + 9.54 0.000 Intergenic Intergenic -295323 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr10-5034 chr10 35125223 35125433 + 9.54 0.000 Intergenic Intergenic -1513 NM_001881 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr3-4387 chr3 193727834 193728044 + 9.54 0.000 Intergenic Intergenic -100607 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA chr2-2120 chr2 43059563 43059773 + 9.54 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -20125 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr17-5322 chr17 28394723 28394933 + 9.54 0.000 3' UTR (NM_080669, exon 5 of 5) 3' UTR (NM_080669, exon 5 of 5) 11384 NM_001242366 113235 Hs.446689 NM_080669 ENSG00000076351 SLC46A1 G21|HCP1|PCFT solute carrier family 46 member 1 protein-coding chr5-4209 chr5 121855835 121856045 + 9.54 0.000 Intergenic L2|LINE|L2 4058 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr7-7560 chr7 118080977 118081187 + 9.54 0.000 Intergenic L2c|LINE|L2 -103082 NM_016200 51691 Hs.655046 NM_016200 ENSG00000128534 LSM8 NAA38 LSM8 homolog, U6 small nuclear RNA associated protein-coding chr17-3273 chr17 40072377 40072587 + 9.54 0.000 intron (NM_199334, intron 1 of 8) intron (NM_199334, intron 1 of 8) 9517 NM_199334 7067 Hs.724 NM_003250 ENSG00000126351 THRA AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1 thyroid hormone receptor alpha protein-coding chr15-2770 chr15 33067661 33067871 + 9.54 0.000 exon (NM_001103184, exon 1 of 17) exon (NM_001103184, exon 1 of 17) 408 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr1-5208 chr1 181290736 181290946 + 9.54 0.000 Intergenic L3|LINE|CR1 54453 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr8-2182 chr8 111364637 111364847 + 9.54 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -11897 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr15-1481 chr15 38679990 38680200 + 9.54 0.000 Intergenic HERV16-int|LTR|ERVL -16503 NR_160786 chr1-11518 chr1 156267424 156267634 + 9.54 0.000 exon (NM_001323614, exon 10 of 21) exon (NM_001323614, exon 10 of 21) 15296 NM_015327 23381 Hs.516837 NM_015327 ENSG00000198952 SMG5 EST1B|LPTS-RP1|LPTSRP1|SMG-5 SMG5 nonsense mediated mRNA decay factor protein-coding chr11-7435 chr11 116735141 116735351 + 9.54 0.000 Intergenic AluJb|SINE|Alu 37741 NM_032725 84811 Hs.437341 NM_032725 ENSG00000137656 BUD13 Cwc26|fSAP71 BUD13 homolog protein-coding chr15-1776 chr15 72599820 72600030 + 9.54 0.000 3' UTR (NM_005744, exon 14 of 14) 3' UTR (NM_005744, exon 14 of 14) 12708 NR_030359 693215 NR_030359 ENSG00000283798 MIR630 MIRN630|hsa-mir-630 microRNA 630 ncRNA chr17-2964 chr17 63442674 63442884 + 9.54 0.000 intron (NM_001915, intron 1 of 5) intron (NM_001915, intron 1 of 5) -1952 NM_001017917 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr1-8363 chr1 62898199 62898409 + 9.54 0.000 Intergenic Intergenic 112621 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr22-2015 chr22 35543026 35543236 + 9.54 0.000 intron (NM_014310, intron 1 of 2) MIR|SINE|MIR 2300 NM_014310 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr4-5836 chr4 105487853 105488063 + 9.54 0.000 Intergenic HERV17-int|LTR|ERV1 -13888 NM_006903 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chr18-2140 chr18 55657086 55657296 + 9.54 0.000 Intergenic LTR88b|LTR|Gypsy? -21234 NM_001243226 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr3-10073 chr3 108312820 108313030 + 9.54 0.000 intron (NM_001282557, intron 1 of 9) intron (NM_001282557, intron 1 of 9) 1140 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr1-4336 chr1 63222483 63222693 + 9.54 0.000 intron (NR_038252, intron 4 of 11) intron (NR_038252, intron 4 of 11) 94669 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr6-5262 chr6 137403329 137403539 + 9.54 0.000 Intergenic Intergenic 90960 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr17-5373 chr17 31239152 31239362 + 9.54 0.000 intron (NM_001042492, intron 29 of 57) L1MCa|LINE|L1 57982 NM_002544 4974 Hs.113874 NM_002544 ENSG00000126861 OMG OMGP oligodendrocyte myelin glycoprotein protein-coding chr17-2298 chr17 40551151 40551361 + 9.54 0.000 Intergenic MIR|SINE|MIR 9138 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr13-3315 chr13 54123665 54123875 + 9.54 0.000 TTS (NR_108062) TTS (NR_108062) 9101 NR_108063 100507428 Hs.351262 NR_108062 ENSG00000234787 LINC00458 LncRNA-ES3 long intergenic non-protein coding RNA 458 ncRNA chr10-4523 chr10 92457600 92457810 + 9.54 0.000 intron (NR_136399, intron 23 of 25) intron (NR_136399, intron 23 of 25) 39044 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - microtubule affinity regulating kinase 2 pseudogene 9 pseudo chr3-6852 chr3 149696678 149696888 + 9.54 0.000 intron (NM_001348362, intron 3 of 9) intron (NM_001348362, intron 3 of 9) 6490 NM_001168278 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr2-12334 chr2 48074024 48074234 + 9.54 0.000 Intergenic Intergenic -168336 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr12-3168 chr12 49683932 49684142 + 9.54 0.000 intron (NM_001367835, intron 1 of 26) L2c|LINE|L2 23368 NM_001367835 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr11-2811 chr11 118909183 118909393 + 9.54 0.000 intron (NM_182557, intron 1 of 7) intron (NM_182557, intron 1 of 7) 1254 NM_182557 283149 Hs.414740 NM_182557 ENSG00000186174 BCL9L B9L|BCL9-2|DLNB11 BCL9 like protein-coding chr19-2985 chr19 33408153 33408363 + 9.54 0.000 intron (NM_001166056, intron 9 of 12) intron (NM_001166056, intron 9 of 12) 33734 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr9-2351 chr9 85223520 85223730 + 9.54 0.000 Intergenic Intergenic 517724 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr13-3614 chr13 29902134 29902344 + 9.54 0.000 Intergenic Intergenic -13834 NR_046510 100874059 Hs.569261 NR_046510 ENSG00000224329 LINC00297 NCRNA00297 long intergenic non-protein coding RNA 297 ncRNA chrX-337 chrX 153476744 153476954 + 9.54 0.000 intron (NR_073156, intron 1 of 12) intron (NR_073156, intron 1 of 12) -6218 NM_017518 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr8-3451 chr8 93128859 93129069 + 9.54 0.000 Intergenic Intergenic 37886 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr22-3381 chr22 31266670 31266880 + 9.43 0.000 intron (NM_001031801, intron 7 of 14) intron (NM_001031801, intron 7 of 14) 18391 NM_001031801 3985 Hs.474596 NM_005569 ENSG00000182541 LIMK2 - LIM domain kinase 2 protein-coding chr1-9497 chr1 37311382 37311592 + 9.43 0.000 Intergenic Intergenic 149924 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr17-8197 chr17 63117360 63117570 + 9.43 0.000 intron (NM_025185, intron 4 of 25) intron (NM_025185, intron 4 of 25) 151230 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr2-8839 chr2 172619020 172619230 + 9.43 0.000 intron (NR_103731, intron 11 of 13) intron (NR_103731, intron 11 of 13) 63035 NR_103729 5163 Hs.470633 NM_002610 ENSG00000152256 PDK1 - pyruvate dehydrogenase kinase 1 protein-coding chr4-5126 chr4 151857328 151857538 + 9.43 0.000 Intergenic LTR78|LTR|ERV1 -96410 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr5-9182 chr5 178630353 178630563 + 9.43 0.000 Intergenic MIRb|SINE|MIR -3408 NM_020666 57396 Hs.406557 NM_020666 ENSG00000113240 CLK4 - CDC like kinase 4 protein-coding chr3-4967 chr3 12879166 12879376 + 9.43 0.000 intron (NR_136189, intron 1 of 2) intron (NR_136189, intron 1 of 2) 5940 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr9-4924 chr9 12524856 12525066 + 9.43 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -168424 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr11-8775 chr11 9859844 9860054 + 9.43 0.000 intron (NM_030962, intron 17 of 39) intron (NM_030962, intron 17 of 39) 20807 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr2-3897 chr2 45184695 45184905 + 9.43 0.000 intron (NR_033831, intron 4 of 5) intron (NR_033831, intron 4 of 5) 70141 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr19-5279 chr19 55691498 55691708 + 9.43 0.000 intron (NM_001321263, intron 6 of 10) intron (NM_001321263, intron 6 of 10) 14978 NM_001130071 29924 Hs.279953 NM_013333 ENSG00000063245 EPN1 - epsin 1 protein-coding chr16-4602 chr16 68696580 68696790 + 9.43 0.000 intron (NM_001793, intron 15 of 15) intron (NM_001793, intron 15 of 15) -40607 NM_001317185 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr8-6180 chr8 33695568 33695778 + 9.43 0.000 Intergenic L2c|LINE|L2 -95567 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr5-4935 chr5 75074245 75074455 + 9.43 0.000 intron (NM_001164443, intron 24 of 24) intron (NM_001164443, intron 24 of 24) -21792 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding chrX-3342 chrX 132543525 132543735 + 9.43 0.000 Intergenic L2|LINE|L2 -53595 NM_001170704 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr5-2862 chr5 78678379 78678589 + 9.43 0.000 Intergenic Intergenic -29712 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr4-3698 chr4 56295124 56295334 + 9.43 0.000 intron (NM_020722, intron 3 of 10) MIR|SINE|MIR 92262 NM_001286668 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr13-1916 chr13 60283312 60283522 + 9.43 0.000 Intergenic MLT2B1|LTR|ERVL -15313 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr5-5886 chr5 14458007 14458217 + 9.43 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -5871 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr12-4523 chr12 24718488 24718698 + 9.43 0.000 Intergenic Intergenic -134425 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr3-5655 chr3 11804047 11804257 + 9.43 0.000 intron (NM_138807, intron 6 of 6) intron (NM_138807, intron 6 of 6) 42733 NR_135611 132001 Hs.475472 NM_138807 ENSG00000144559 TAMM41 C3orf31|RAM41|TAM41 TAM41 mitochondrial translocator assembly and maintenance homolog protein-coding chr7-5709 chr7 70270432 70270642 + 9.43 0.000 intron (NM_015570, intron 4 of 18) L2c|LINE|L2 672062 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr6-3726 chr6 3438341 3438551 + 9.43 0.000 intron (NM_021945, intron 1 of 10) intron (NM_021945, intron 1 of 10) 6567 NM_021945 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr1-15497 chr1 155884634 155884844 + 9.43 0.000 3' UTR (NM_152280, exon 4 of 4) 3' UTR (NM_152280, exon 4 of 4) 25172 NM_152280 23208 Hs.32984 NM_152280 ENSG00000132718 SYT11 SYT12|sytXI synaptotagmin 11 protein-coding chr16-4520 chr16 60807427 60807637 + 9.43 0.000 Intergenic L1MA2|LINE|L1 248234 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr2-7027 chr2 151525873 151526083 + 9.43 0.000 exon (NM_004543, exon 122 of 149) exon (NM_004543, exon 122 of 149) 116076 NM_018151 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding chr7-5618 chr7 52799454 52799664 + 9.43 0.000 Intergenic Intergenic -236074 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr6-3157 chr6 114318319 114318529 + 9.43 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -255547 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr21-1032 chr21 23865548 23865758 + 9.43 0.000 Intergenic Intergenic 455724 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr3-3818 chr3 22082150 22082360 + 9.43 0.000 Intergenic L1PA5|LINE|L1 125116 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr17-5510 chr17 42247824 42248034 + 9.43 0.000 intron (NM_012448, intron 1 of 18) AluJo|SINE|Alu 28477 NM_012448 6777 Hs.595276 NM_012448 ENSG00000173757 STAT5B STAT5 signal transducer and activator of transcription 5B protein-coding chr10-3366 chr10 17783287 17783497 + 9.43 0.000 intron (NM_001098844, intron 3 of 3) intron (NM_001098844, intron 3 of 3) -25956 NM_002438 4360 Hs.75182 NM_002438 ENSG00000260314 MRC1 CD206|CLEC13D|CLEC13DL|MMR|MRC1L1|bA541I19.1|hMR mannose receptor C-type 1 protein-coding chr11-6106 chr11 36090442 36090652 + 9.43 0.000 intron (NM_001304264, intron 2 of 5) intron (NM_001304264, intron 2 of 5) -12646 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr14-2779 chr14 20433854 20434064 + 9.43 0.000 intron (NM_001109997, intron 1 of 3) MIR3|SINE|MIR 1871 NM_001109997 123103 Hs.556014 NM_001109997 ENSG00000185271 KLHL33 - kelch like family member 33 protein-coding chr15-3022 chr15 57518924 57519134 + 9.43 0.000 intron (NM_032866, intron 10 of 18) intron (NM_032866, intron 10 of 18) -72875 NR_104368 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr5-4756 chr5 52979491 52979701 + 9.43 0.000 Intergenic Intergenic -9756 NR_073105 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr4-2563 chr4 87499798 87500008 + 9.43 0.000 intron (NM_004684, intron 1 of 10) intron (NM_004684, intron 1 of 10) 29600 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr11-1520 chr11 110712407 110712617 + 9.43 0.000 promoter-TSS (NM_001258415) promoter-TSS (NM_001258415) 216 NM_020809 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr10-3196 chr10 92812148 92812358 + 9.43 0.000 Intergenic Intergenic -14578 NM_001013848 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr17-5808 chr17 64418686 64418896 + 9.43 0.000 Intergenic Intergenic -27931 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr18-3348 chr18 57525534 57525744 + 9.43 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 61063 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr14-2118 chr14 74955481 74955691 + 9.43 0.000 5' UTR (NM_001207012, exon 1 of 6) 5' UTR (NM_001207012, exon 1 of 6) 178 NM_002632 5228 Hs.252820 NM_002632 ENSG00000119630 PGF D12S1900|PGFL|PIGF|PLGF|PlGF-2|SHGC-10760 placental growth factor protein-coding chrX-2621 chrX 108400504 108400714 + 9.43 0.000 intron (NM_001287758, intron 2 of 45) intron (NM_001287758, intron 2 of 45) 37813 NM_033641 1288 Hs.145586 NM_001847 ENSG00000197565 COL4A6 CXDELq22.3|DELXq22.3|DFNX6 collagen type IV alpha 6 chain protein-coding chr13-1234 chr13 85552343 85552553 + 9.43 0.000 Intergenic Intergenic 188845 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr6-3901 chr6 66380149 66380359 + 9.43 0.000 Intergenic L1PBa|LINE|L1 592375 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr3-2124 chr3 65473688 65473898 + 9.43 0.000 intron (NM_001365904, intron 4 of 24) intron (NM_001365904, intron 4 of 24) -420023 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr17-6946 chr17 43208198 43208408 + 9.43 0.000 intron (NM_005899, intron 20 of 20) intron (NM_005899, intron 20 of 20) -3572 NM_145041 113277 Hs.536474 NM_145041 ENSG00000184988 TMEM106A - transmembrane protein 106A protein-coding chr13-2033 chr13 45927047 45927257 + 9.43 0.000 Intergenic Intergenic -75399 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr10-2045 chr10 86939498 86939708 + 9.43 0.000 intron (NM_024756, intron 6 of 6) intron (NM_024756, intron 6 of 6) -16156 NM_001330120 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chr2-8175 chr2 86411772 86411982 + 9.43 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -29494 NM_018433 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr8-4527 chr8 122986041 122986251 + 9.43 0.000 Intergenic Intergenic 39626 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr14-2551 chr14 27194215 27194425 + 9.43 0.000 Intergenic L1MA4A|LINE|L1 285678 NR_036193 100423019 NR_036193 ENSG00000265165 MIR4307 - microRNA 4307 ncRNA chr13-2258 chr13 26984907 26985117 + 9.43 0.000 Intergenic AluJb|SINE|Alu -140521 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr1-14684 chr1 61967863 61968073 + 9.43 0.000 intron (NM_001350145, intron 27 of 43) intron (NM_001350145, intron 27 of 43) -110818 NR_036058 100422902 NR_036058 ENSG00000263908 MIR3116-1 - microRNA 3116-1 ncRNA chr11-5061 chr11 107984528 107984738 + 9.43 0.000 Intergenic HERVL-int|LTR|ERVL -24265 NM_003478 8065 Hs.440320 NM_003478 ENSG00000166266 CUL5 CUL-5|VACM-1|VACM1 cullin 5 protein-coding chr10-3520 chr10 71912551 71912761 + 9.43 0.000 Intergenic Intergenic -51739 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr6-5405 chr6 155182833 155183043 + 9.43 0.000 intron (NM_012454, intron 12 of 25) intron (NM_012454, intron 12 of 25) -34028 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr3-6122 chr3 54256268 54256478 + 9.43 0.000 intron (NM_018398, intron 2 of 37) MER85|DNA|PiggyBac 133821 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr15-2955 chr15 48966736 48966946 + 9.43 0.000 Intergenic MIR|SINE|MIR -2922 NM_203349 399694 Hs.642615 NM_203349 ENSG00000185634 SHC4 RaLP|SHCD SHC adaptor protein 4 protein-coding chr11-8111 chr11 44681227 44681437 + 9.43 0.000 Intergenic Intergenic -45630 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr10-3628 chr10 96129778 96129988 + 9.43 0.000 promoter-TSS (NM_001330737) promoter-TSS (NM_001330737) 168 NM_001278526 9849 Hs.600823 NM_014803 ENSG00000177853 ZNF518A ZNF518 zinc finger protein 518A protein-coding chr14-1381 chr14 35944261 35944471 + 9.43 0.000 Intergenic Charlie7|DNA|hAT-Charlie 118028 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr22-2503 chr22 22820075 22820285 + 9.43 0.000 Intergenic LTR16|LTR|ERVL -2596 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr2-5535 chr2 158875632 158875842 + 9.43 0.000 Intergenic Intergenic 80420 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr2-5453 chr2 124517150 124517360 + 9.43 0.000 intron (NM_130773, intron 8 of 23) intron (NM_130773, intron 8 of 23) 491968 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr2-6049 chr2 125631781 125631991 + 9.43 0.000 Intergenic LTR12_|LTR|ERV1 486099 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr19-2680 chr19 16006426 16006636 + 9.43 0.000 Intergenic AluSx1|SINE|Alu -9103 NR_026828 126536 Hs.131824 NR_026828 ENSG00000205396 LINC00661 - long intergenic non-protein coding RNA 661 ncRNA chr2-8950 chr2 188440169 188440379 + 9.43 0.000 intron (NM_016315, intron 2 of 11) intron (NM_016315, intron 2 of 11) 142782 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chrX-1133 chrX 30272625 30272835 + 9.43 0.000 Intergenic MLT2F|LTR|ERVL 25584 NM_177404 4112 Hs.73021 NM_002363 ENSG00000214107 MAGEB1 CT3.1|DAM10|MAGE-Xp|MAGEL1 MAGE family member B1 protein-coding chr4-2601 chr4 129265914 129266124 + 9.43 0.000 Intergenic Intergenic 169867 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr1-4866 chr1 31325285 31325495 + 9.43 0.000 intron (NM_001282571, intron 3 of 6) MER52A|LTR|ERV1 28408 NM_001282574 51538 Hs.524094 NM_016505 ENSG00000121766 ZCCHC17 HSPC251|PS1D|pNO40 zinc finger CCHC-type containing 17 protein-coding chr21-546 chr21 42586877 42587087 + 9.43 0.000 Intergenic Intergenic 28113 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chr12-2299 chr12 118154020 118154230 + 9.43 0.000 intron (NM_001346490, intron 20 of 21) intron (NM_001346490, intron 20 of 21) 18001 NM_002567 5037 Hs.433863 NM_002567 ENSG00000089220 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|HEL-S-96|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding chr1-8978 chr1 9858617 9858827 + 9.43 0.000 intron (NM_020248, intron 5 of 5) L2a|LINE|L2 -34196 NM_001009566 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr1-8292 chr1 42322766 42322976 + 9.43 0.000 intron (NM_001198851, intron 2 of 14) CR1-3_Croc|LINE|CR1 12084 NM_001198851 22887 Hs.26023 NM_014947 ENSG00000198815 FOXJ3 - forkhead box J3 protein-coding chr11-1994 chr11 44767431 44767641 + 9.43 0.000 intron (NM_130783, intron 2 of 9) intron (NM_130783, intron 2 of 9) 40574 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr15-2489 chr15 99983603 99983813 + 9.43 0.000 intron (NM_139057, intron 20 of 21) intron (NM_139057, intron 20 of 21) 176685 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr7-3559 chr7 18778368 18778578 + 9.43 0.000 intron (NM_058176, intron 15 of 22) intron (NM_058176, intron 15 of 22) 269203 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr3-6501 chr3 112685447 112685657 + 9.43 0.000 Intergenic Intergenic -44409 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr12-4088 chr12 55709369 55709579 + 9.43 0.000 intron (NM_001367993, intron 2 of 25) intron (NM_001367993, intron 2 of 25) -1570 NM_002206 3679 Hs.524484 NM_002206 ENSG00000135424 ITGA7 - integrin subunit alpha 7 protein-coding chr1-4973 chr1 54916306 54916516 + 9.43 0.000 Intergenic HERV17-int|LTR|ERV1 -29216 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr17-1452 chr17 41549047 41549257 + 9.43 0.000 TTS (NR_038442) TTS (NR_038442) 5343 NR_038442 147093 Hs.680576 NR_038442 ENSG00000226629 LINC00974 - long intergenic non-protein coding RNA 974 ncRNA chr1-9412 chr1 31984736 31984946 + 9.43 0.000 Intergenic Intergenic -29027 NR_073498 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr20-2493 chr20 33263901 33264111 + 9.43 0.000 Intergenic ERVL-E-int|LTR|ERVL -19208 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr17-5341 chr17 29090427 29090637 + 9.43 0.000 exon (NM_203318, exon 36 of 41) exon (NM_203318, exon 36 of 41) -14923 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr2-12183 chr2 40890594 40890804 + 9.43 0.000 Intergenic L1M2|LINE|L1 -378264 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr9-4549 chr9 84445232 84445442 + 9.43 0.000 Intergenic AluJb|SINE|Alu -76610 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr6-5346 chr6 147711848 147712058 + 9.43 0.000 Intergenic Intergenic 203263 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr18-803 chr18 70378006 70378216 + 9.43 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 6480 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LINC01910 - long intergenic non-protein coding RNA 1910 ncRNA chr1-9804 chr1 58901706 58901916 + 9.43 0.000 Intergenic L2c|LINE|L2 116660 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr12-3323 chr12 85829421 85829631 + 9.43 0.000 intron (NM_005447, intron 1 of 1) intron (NM_005447, intron 1 of 1) 6883 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr19-2651 chr19 7674319 7674529 + 9.43 0.000 Intergenic Intergenic -2633 NM_174918 199675 Hs.709539 NM_174918 ENSG00000183019 MCEMP1 C19orf59 mast cell expressed membrane protein 1 protein-coding chr12-6036 chr12 110704514 110704724 + 9.43 0.000 Intergenic AluJo|SINE|Alu -14842 NM_001040107 84329 Hs.211511 NM_032369 ENSG00000122986 HVCN1 HV1|VSOP hydrogen voltage gated channel 1 protein-coding chr2-6350 chr2 94985243 94985453 + 9.43 0.000 Intergenic Intergenic -38006 NR_037597 442028 Hs.611545 NR_037597 ENSG00000259848 LOC442028 - uncharacterized LOC442028 ncRNA chr9-4574 chr9 90910799 90911009 + 9.43 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 83484 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr2-8163 chr2 85264602 85264812 + 9.43 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) 51055 NR_136323 102724579 Hs.669216 NR_136323 LOC102724579 - uncharacterized LOC102724579 ncRNA chr16-2999 chr16 27626946 27627156 + 9.43 0.000 intron (NM_015202, intron 3 of 27) Tigger17a|DNA|TcMar-Tigger 76907 NM_015202 23247 Hs.460459 NM_015202 ENSG00000047578 KIAA0556 JBTS26 KIAA0556 protein-coding chr3-6313 chr3 76955036 76955246 + 9.43 0.000 Intergenic L1MB4|LINE|L1 -84958 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr2-10395 chr2 182413226 182413436 + 9.43 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) 13717 NM_001363871 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr15-2935 chr15 47360342 47360552 + 9.43 0.000 intron (NM_001198999, intron 1 of 19) MER3|DNA|hAT-Charlie 176358 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr6-7443 chr6 54868825 54869035 + 9.43 0.000 intron (NM_001010872, intron 1 of 4) intron (NM_001010872, intron 1 of 4) 22159 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr8-5269 chr8 138328633 138328843 + 9.43 0.000 intron (NM_015912, intron 2 of 19) MIR|SINE|MIR 168523 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr2-14666 chr2 236342240 236342450 + 9.43 0.000 intron (NM_001270584, intron 15 of 17) intron (NM_001270584, intron 15 of 17) -78000 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr15-4361 chr15 41527997 41528207 + 9.43 0.000 intron (NM_015540, intron 10 of 24) intron (NM_015540, intron 10 of 24) -14275 NM_002344 4058 Hs.434481 NM_002344 ENSG00000062524 LTK TYK1 leukocyte receptor tyrosine kinase protein-coding chr18-1420 chr18 9539460 9539670 + 9.43 0.000 Intergenic Intergenic 64052 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr11-3144 chr11 46855689 46855899 + 9.43 0.000 TTS (NM_002334) TTS (NM_002334) 9383 NR_038909 100507401 Hs.675301 NR_038909 ENSG00000247675 LRP4-AS1 - LRP4 antisense RNA 1 ncRNA chr3-8030 chr3 194471361 194471571 + 9.43 0.000 intron (NM_001367549, intron 2 of 33) AluSz|SINE|Alu -3227 NM_024524 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr8-6385 chr8 54662723 54662933 + 9.43 0.000 Intergenic L1MEf|LINE|L1 46732 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr13-2377 chr13 40389653 40389863 + 9.43 0.000 intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 91248 NR_024506 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr6-3532 chr6 38188041 38188251 + 9.43 0.000 intron (NM_052893, intron 11 of 11) intron (NM_052893, intron 11 of 11) -293450 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr3-5606 chr3 9256340 9256550 + 9.43 0.000 intron (NR_146969, intron 1 of 2) intron (NR_146969, intron 1 of 2) 6689 NR_146969 101927440 NR_146969 ENSG00000235830 SRGAP3-AS4 - SRGAP3 antisense RNA 4 ncRNA chr11-9994 chr11 78898238 78898448 + 9.43 0.000 intron (NM_001098816, intron 7 of 33) intron (NM_001098816, intron 7 of 33) -323479 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr1-4108 chr1 235011852 235012062 + 9.43 0.000 Intergenic Intergenic -47958 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr2-12765 chr2 85345366 85345576 + 9.43 0.000 intron (NM_017750, intron 6 of 10) intron (NM_017750, intron 6 of 10) 9057 NM_017750 54884 Hs.440401 NM_017750 ENSG00000042445 RETSAT - retinol saturase protein-coding chr18-2214 chr18 64020293 64020503 + 9.43 0.000 TTS (NM_001348367) TTS (NM_001348367) 50317 NM_001031848 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr5-3270 chr5 110256400 110256610 + 9.43 0.000 Intergenic Intergenic 257410 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr5-5098 chr5 99178718 99178928 + 9.43 0.000 Intergenic Intergenic -249109 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr1-10990 chr1 217062221 217062431 + 9.43 0.000 intron (NM_001243509, intron 1 of 8) intron (NM_001243509, intron 1 of 8) 14666 NM_001243509 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr2-6836 chr2 68779553 68779763 + 9.43 0.000 intron (NM_001007231, intron 2 of 10) intron (NM_001007231, intron 2 of 10) 4748 NM_001166276 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding chr13-1457 chr13 75739925 75740135 + 9.43 0.000 intron (NM_005358, intron 4 of 29) intron (NM_005358, intron 4 of 29) -20290 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr5-3324 chr5 131396849 131397059 + 9.43 0.000 Intergenic Intergenic 132945 NM_020240 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding chr11-5360 chr11 64494240 64494450 + 9.43 0.000 Intergenic L1MC4|LINE|L1 45288 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr4-8376 chr4 149035339 149035549 + 9.43 0.000 Intergenic Intergenic -93066 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr8-2500 chr8 16086285 16086495 + 9.43 0.000 Intergenic Intergenic 99882 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr9-7745 chr9 75467128 75467338 + 9.43 0.000 Intergenic Intergenic 378719 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr5-2503 chr5 151072327 151072537 + 9.43 0.000 intron (NM_001252390, intron 1 of 17) intron (NM_001252390, intron 1 of 17) -7301 NM_001258456 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr9-3706 chr9 109628267 109628477 + 9.43 0.000 Intergenic Intergenic -12416 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr9-8295 chr9 113715209 113715419 + 9.43 0.000 Intergenic Charlie24|DNA|hAT-Charlie 121185 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr21-1041 chr21 25871786 25871996 + 9.43 0.000 Intergenic L2a|LINE|L2 -136237 NM_001003703 522 Hs.246310 NM_001685 ENSG00000154723 ATP5PF ATP5|ATP5A|ATP5J|ATPM|CF6|F6 ATP synthase peripheral stalk subunit F6 protein-coding chr6-1885 chr6 125469284 125469494 + 9.43 0.000 Intergenic Intergenic -167422 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chr2-9012 chr2 196245016 196245226 + 9.43 0.000 intron (NM_020760, intron 19 of 28) intron (NM_020760, intron 19 of 28) -14903 NR_110225 101927482 Hs.191841 NR_110225 HECW2-AS1 - HECW2 antisense RNA 1 ncRNA chr5-5492 chr5 141487910 141488120 + 9.43 0.000 TTS (NM_032406) TTS (NM_032406) -1066 NM_018929 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr15-4277 chr15 36214311 36214521 + 9.43 0.000 Intergenic THE1B|LTR|ERVL-MaLR 287560 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr2-10155 chr2 79822700 79822910 + 9.43 0.000 intron (NM_001282598, intron 3 of 17) L2|LINE|L2 43778 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr14-5106 chr14 88809080 88809290 + 9.43 0.000 Intergenic MLT2B1|LTR|ERVL -14968 NM_198310 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr16-4168 chr16 8090437 8090647 + 9.43 0.000 Intergenic L2c|LINE|L2 499296 NM_001290095 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr10-8236 chr10 73983620 73983830 + 9.43 0.000 Intergenic L1MEc|LINE|L1 -14389 NM_014000 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr2-9715 chr2 59918630 59918840 + 9.43 0.000 Intergenic Intergenic 464301 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr14-2534 chr14 21255419 21255629 + 9.43 0.000 intron (NM_001077442, intron 1 of 7) intron (NM_001077442, intron 1 of 7) 13955 NM_001077442 3183 Hs.508848 NM_004500 ENSG00000092199 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding chr19-2042 chr19 3225166 3225376 + 9.43 0.000 promoter-TSS (NR_033342) promoter-TSS (NR_033342) -7 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chrX-4940 chrX 111165948 111166158 + 9.43 0.000 intron (NM_001128172, intron 7 of 14) intron (NM_001128172, intron 7 of 14) 42976 NM_001128172 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr17-3315 chr17 63992101 63992311 + 9.43 0.000 Intergenic Intergenic -6145 NM_001191031 92340 Hs.708161 NM_001164257 ENSG00000224383 PRR29 C17orf72 proline rich 29 protein-coding chr14-2722 chr14 91296810 91297020 + 9.43 0.000 intron (NM_001080414, intron 22 of 29) intron (NM_001080414, intron 22 of 29) -43035 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr5-4855 chr5 64151452 64151662 + 9.43 0.000 Intergenic L1PBa|LINE|L1 -14286 NM_178532 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr8-3678 chr8 16999911 17000121 + 9.43 0.000 intron (NM_019851, intron 1 of 2) intron (NM_019851, intron 1 of 2) 2329 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr1-11542 chr1 168695922 168696132 + 9.43 0.000 3' UTR (NM_001937, exon 4 of 4) 3' UTR (NM_001937, exon 4 of 4) 33179 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr6-8104 chr6 126448250 126448460 + 9.43 0.000 intron (NR_104462, intron 3 of 3) MER5A1|DNA|hAT-Charlie -36276 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr4-8105 chr4 125369086 125369296 + 9.43 0.000 intron (NM_001291303, intron 1 of 16) intron (NM_001291303, intron 1 of 16) 52779 NM_001291303 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr1-6856 chr1 109483261 109483471 + 9.43 0.000 promoter-TSS (NM_001350175) promoter-TSS (NM_001350175) -539 NM_153340 127002 Hs.118248 NM_153340 ENSG00000162650 ATXN7L2 - ataxin 7 like 2 protein-coding chr18-1463 chr18 51902520 51902730 + 9.43 0.000 Intergenic L1MCc|LINE|L1 -437572 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chrX-3094 chrX 138630329 138630539 + 9.43 0.000 3' UTR (NM_004114, exon 5 of 5) 3' UTR (NM_004114, exon 5 of 5) 37359 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr7-3871 chr7 105257241 105257451 + 9.43 0.000 intron (NM_182692, intron 2 of 15) intron (NM_182692, intron 2 of 15) 11731 NM_001350739 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr12-6546 chr12 116141990 116142200 + 9.43 0.000 intron (NM_015335, intron 2 of 30) L2a|LINE|L2 6559 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr10-4032 chr10 15976664 15976874 + 9.43 0.000 Intergenic THE1C|LTR|ERVL-MaLR -116236 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chr11-4050 chr11 13147385 13147595 + 9.43 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -129162 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chrX-1695 chrX 14112039 14112249 + 9.43 0.000 Intergenic Intergenic -82252 NM_001042480 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chr22-1533 chr22 25923092 25923302 + 9.43 0.000 intron (NM_001318245, intron 34 of 43) intron (NM_001318245, intron 34 of 43) 181009 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr2-11730 chr2 10598774 10598984 + 9.43 0.000 intron (NR_048552, intron 16 of 19) Tigger6a|DNA|TcMar-Tigger 91096 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr12-4522 chr12 24623814 24624024 + 9.43 0.000 Intergenic L1PA6|LINE|L1 -39751 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr4-2538 chr4 66178898 66179108 + 9.43 0.000 Intergenic Intergenic -97821 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr8-4605 chr8 130739586 130739796 + 9.43 0.000 Intergenic L1PA16|LINE|L1 -296017 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr7-6401 chr7 153953565 153953775 + 9.43 0.000 intron (NR_157195, intron 1 of 24) intron (NR_157195, intron 1 of 24) 66336 NM_001039350 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr14-5068 chr14 83912152 83912362 + 9.43 0.000 Intergenic Intergenic 1269625 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr22-1545 chr22 31616687 31616897 + 9.43 0.000 exon (NM_001258327, exon 28 of 31) exon (NM_001258327, exon 28 of 31) 4739 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr18-3533 chr18 76077634 76077844 + 9.43 0.000 Intergenic Intergenic -45259 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA chr8-4389 chr8 103478198 103478408 + 9.43 0.000 Intergenic Intergenic 20928 NR_145704 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA chr15-4785 chr15 71279103 71279313 + 9.43 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -90149 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr5-2233 chr5 7420332 7420542 + 9.43 0.000 intron (NM_020546, intron 2 of 24) intron (NM_020546, intron 2 of 24) 24299 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chrX-1625 chrX 117306331 117306541 + 9.43 0.000 Intergenic L1PA7|LINE|L1 -488576 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr20-2476 chr20 32567507 32567717 + 9.43 0.000 intron (NM_001256798, intron 1 of 10) MIR|SINE|MIR 17721 NM_001256798 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr10-8089 chr10 68271548 68271758 + 9.43 0.000 Intergenic Intergenic -39540 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding chr14-2959 chr14 49946823 49947033 + 9.43 0.000 Intergenic Intergenic -19471 NR_106724 102464828 NR_106724 ENSG00000278038 MIR6076 hsa-mir-6076 microRNA 6076 ncRNA chr21-1365 chr21 38266787 38266997 + 9.43 0.000 intron (NM_002243, intron 2 of 3) MIR|SINE|MIR -5528 NM_170737 3772 Hs.411299 NM_002243 ENSG00000157551 KCNJ15 IRKK|KIR1.3|KIR4.2 potassium voltage-gated channel subfamily J member 15 protein-coding chr3-4239 chr3 141180279 141180489 + 9.43 0.000 Intergenic Intergenic -51441 NM_001282728 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr12-1546 chr12 98317829 98318039 + 9.43 0.000 Intergenic Intergenic 139211 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr3-3519 chr3 30369178 30369388 + 9.43 0.000 Intergenic L1MC1|LINE|L1 -149585 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr4-4235 chr4 17385366 17385576 + 9.43 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -64589 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr2-7855 chr2 49276031 49276241 + 9.43 0.000 Intergenic Intergenic -121609 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding chrX-2429 chrX 77917863 77918073 + 9.43 0.000 intron (NM_001282224, intron 1 of 21) intron (NM_001282224, intron 1 of 21) 7275 NM_000052 538 Hs.496414 NM_000052 ENSG00000165240 ATP7A DSMAX|MK|MNK|SMAX3 ATPase copper transporting alpha protein-coding chr5-8016 chr5 87957831 87958041 + 9.43 0.000 Intergenic Intergenic 295894 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr20-967 chr20 39050221 39050431 + 9.43 0.000 Intergenic CpG 87982 NR_033905 60625 Hs.444520 NM_021931 ENSG00000101452 DHX35 C20orf15|DDX35|KAIA0875 DEAH-box helicase 35 protein-coding chr6-5376 chr6 151196675 151196885 + 9.43 0.000 non-coding (NR_125868, exon 3 of 3) non-coding (NR_125868, exon 3 of 3) 31677 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr7-5800 chr7 81024685 81024895 + 9.43 0.000 Intergenic Intergenic -102401 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr2-6688 chr2 20507294 20507504 + 9.43 0.000 Intergenic Intergenic -5875 NR_157978 107985856 NR_157978 LOC107985856 - uncharacterized LOC107985856 ncRNA chr9-5902 chr9 132518066 132518276 + 9.43 0.000 intron (NM_207417, intron 4 of 6) intron (NM_207417, intron 4 of 6) -64435 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr20-2053 chr20 7967649 7967859 + 9.43 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -27296 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr5-2711 chr5 104732892 104733102 + 9.43 0.000 Intergenic Intergenic -366477 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr3-4650 chr3 34162499 34162709 + 9.43 0.000 Intergenic Intergenic 363974 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr3-7898 chr3 133433023 133433233 + 9.43 0.000 intron (NR_135278, intron 4 of 4) HERVH-int|LTR|ERV1 22648 NR_135278 85003 Hs.659202 NR_135276 ENSG00000249993 BFSP2-AS1 - BFSP2 antisense RNA 1 ncRNA chr9-8453 chr9 122674469 122674679 + 9.43 0.000 promoter-TSS (NM_001005234) promoter-TSS (NM_001005234) -556 NM_001005234 26735 Hs.626839 NM_001005234 ENSG00000171481 OR1L3 OR9-28|OR9-D olfactory receptor family 1 subfamily L member 3 protein-coding chr2-12583 chr2 70488821 70489031 + 9.43 0.000 intron (NM_003236, intron 2 of 5) intron (NM_003236, intron 2 of 5) -7286 NR_046798 100874273 Hs.682157 NR_046798 ENSG00000224606 TGFA-IT1 - TGFA intronic transcript 1 ncRNA chrX-1941 chrX 3191112 3191322 + 9.43 0.000 Intergenic (GAGA)n|Simple_repeat|Simple_repeat -80603 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 LINC01546 CXorf28 long intergenic non-protein coding RNA 1546 ncRNA chr7-6563 chr7 66388018 66388228 + 9.43 0.000 intron (NR_026873, intron 3 of 4) MER21C|LTR|ERVL 12285 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr4-6374 chr4 108350860 108351070 + 9.43 0.000 Intergenic Intergenic 178845 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr20-2369 chr20 16936546 16936756 + 9.43 0.000 Intergenic Intergenic 188298 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr3-10927 chr3 173331065 173331275 + 9.43 0.000 Intergenic L1MB3|LINE|L1 -64782 NM_001365929 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr2-7405 chr2 8804187 8804397 + 9.43 0.000 intron (NM_001348732, intron 7 of 28) intron (NM_001348732, intron 7 of 28) 33321 NM_001348732 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr7-5815 chr7 83038823 83039033 + 9.43 0.000 intron (NM_033026, intron 3 of 24) L1MB7|LINE|L1 123956 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chrX-1540 chrX 40537640 40537850 + 9.43 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -43225 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chr18-1783 chr18 11465551 11465761 + 9.43 0.000 intron (NR_146901, intron 3 of 3) GA-rich|Low_complexity|Low_complexity 11178 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr12-3454 chr12 116186771 116186981 + 9.43 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) -38222 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr18-1652 chr18 59725437 59725647 + 9.43 0.000 Intergenic MER20|DNA|hAT-Charlie -28119 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr3-4116 chr3 113288220 113288430 + 9.43 0.000 TTS (NM_033254) TTS (NM_033254) 76209 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr7-6359 chr7 150379806 150380016 + 9.43 0.000 intron (NM_173680, intron 1 of 2) intron (NM_173680, intron 1 of 2) 581 NM_173680 285971 Hs.655734 NM_173680 ENSG00000196456 ZNF775 - zinc finger protein 775 protein-coding chr1-9513 chr1 38482132 38482342 + 9.43 0.000 Intergenic Intergenic 7041 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr14-1688 chr14 94767442 94767652 + 9.43 0.000 TTS (NM_173849) TTS (NM_173849) 2615 NM_173849 145258 Hs.440438 NM_173849 ENSG00000133937 GSC SAMS goosecoid homeobox protein-coding chr5-3160 chr5 71699891 71700101 + 9.43 0.000 Intergenic Intergenic -19279 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr9-4447 chr9 19397133 19397343 + 9.43 0.000 Intergenic Intergenic -11771 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr9-2172 chr9 129488603 129488813 + 9.43 0.000 promoter-TSS (NR_038955) promoter-TSS (NR_038955) 48 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr12-4190 chr12 95359417 95359627 + 9.43 0.000 Intergenic Charlie17a|DNA|hAT-Charlie 49599 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr3-5601 chr3 8990957 8991167 + 9.43 0.000 intron (NM_014850, intron 20 of 21) intron (NM_014850, intron 20 of 21) -27590 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr14-2601 chr14 54002783 54002993 + 9.43 0.000 Intergenic X9_LINE|LINE|L1 -45997 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr16-5525 chr16 24227459 24227669 + 9.43 0.000 Intergenic L2a|LINE|L2 -8540 NR_146569 105371142 Hs.128031 NR_146569 ENSG00000260264 LINC2194 - long intergenic non-protein coding RNA 2194 ncRNA chr19-3094 chr19 5818584 5818794 + 9.43 0.000 Intergenic Intergenic -5113 NM_004558 4902 Hs.234775 NM_004558 ENSG00000171119 NRTN NTN neurturin protein-coding chr16-1433 chr16 57000605 57000815 + 9.43 0.000 intron (NM_001330552, intron 1 of 47) intron (NM_001330552, intron 1 of 47) 11153 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr4-3997 chr4 1116202 1116412 + 9.43 0.000 non-coding (NR_033768, exon 3 of 4) non-coding (NR_033768, exon 3 of 4) 2668 NR_134676 105374344 Hs.128102 NR_134676 ENSG00000251652 LOC105374344 - uncharacterized LOC105374344 ncRNA chr8-4227 chr8 87395290 87395500 + 9.43 0.000 Intergenic Intergenic 478620 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr9-3229 chr9 136922825 136923035 + 9.43 0.000 intron (NM_021138, intron 9 of 10) intron (NM_021138, intron 9 of 10) 21808 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr6-3354 chr6 33589789 33589999 + 9.43 0.000 TTS (NR_028361) TTS (NR_028361) 3444 NR_027908 401253 Hs.520075 NM_207497 ENSG00000197251 LINC00336 C6orf227|NCRNA00336 long intergenic non-protein coding RNA 336 ncRNA chr5-4333 chr5 157932627 157932837 + 9.43 0.000 Intergenic MamTip3|DNA|hAT-Tip100 -73587 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr5-3967 chr5 9542884 9543094 + 9.43 0.000 intron (NM_003966, intron 1 of 22) intron (NM_003966, intron 1 of 22) 3086 NM_003966 9037 Hs.27621 NM_003966 ENSG00000112902 SEMA5A SEMAF|semF semaphorin 5A protein-coding chr19-3231 chr19 615687 615897 + 9.43 0.000 intron (NM_001194, intron 7 of 7) CpG 17745 NM_005035 5442 Hs.254113 NM_005035 ENSG00000099821 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL RNA polymerase mitochondrial protein-coding chr9-4025 chr9 74155807 74156017 + 9.43 0.000 Intergenic Intergenic -215619 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr1-10132 chr1 102561171 102561381 + 9.43 0.000 Intergenic L2a|LINE|L2 547220 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chrX-1697 chrX 15073519 15073729 + 9.43 0.000 Intergenic LTR50|LTR|ERVL 188333 NM_001177475 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr6-4954 chr6 102866936 102867146 + 9.43 0.000 Intergenic Intergenic 1468056 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr11-3996 chr11 3517093 3517303 + 9.43 0.000 intron (NR_126335, intron 1 of 2) MSTA|LTR|ERVL-MaLR 54789 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA chr7-4613 chr7 23436109 23436319 + 9.43 0.000 intron (NM_006547, intron 2 of 14) L1MC5|LINE|L1 34277 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding chr8-3689 chr8 17674931 17675141 + 9.43 0.000 intron (NR_156437, intron 7 of 13) intron (NR_156437, intron 7 of 13) 1465 NM_001330470 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chrX-371 chrX 74166905 74167115 + 9.43 0.000 intron (NR_028379, intron 5 of 6) SVA_E|Retroposon|SVA 51451 NR_030398 693122 NR_030398 ENSG00000202566 MIR421 MIRN421|hsa-mir-421 microRNA 421 ncRNA chr5-6828 chr5 108639233 108639443 + 9.43 0.000 Intergenic Intergenic 88923 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr2-8148 chr2 82995981 82996191 + 9.43 0.000 Intergenic Intergenic 139283 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr9-2798 chr9 119005164 119005374 + 9.43 0.000 Intergenic Intergenic 325598 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr9-4214 chr9 40914078 40914288 + 9.43 0.000 Intergenic CER|Satellite|Satellite 14909 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr5-3118 chr5 54362565 54362775 + 9.43 0.000 intron (NR_126379, intron 1 of 4) intron (NR_126379, intron 1 of 4) 41726 NR_126379 104355136 Hs.559024 NR_126379 ENSG00000249069 LINC01033 - long intergenic non-protein coding RNA 1033 ncRNA chr22-2708 chr22 37881078 37881288 + 9.43 0.000 intron (NM_001242923, intron 9 of 10) L1ME4b|LINE|L1 -25114 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr4-2681 chr4 1928850 1929060 + 9.43 0.000 intron (NM_133334, intron 4 of 8) intron (NM_133334, intron 4 of 8) 28329 NM_133334 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr10-9192 chr10 132055597 132055807 + 9.43 0.000 Intergenic Intergenic -10244 NM_001323090 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr15-4310 chr15 39357907 39358117 + 9.43 0.000 Intergenic Intergenic 107343 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr11-3827 chr11 68054004 68054214 + 9.43 0.000 intron (NM_001277, intron 11 of 11) intron (NM_001277, intron 11 of 11) 9315 NR_106811 102465451 NR_106811 ENSG00000275022 MIR6753 hsa-mir-6753 microRNA 6753 ncRNA chr3-8141 chr3 29012386 29012596 + 9.43 0.000 Intergenic Intergenic 268448 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr11-5029 chr11 83738605 83738815 + 9.43 0.000 intron (NM_001142699, intron 18 of 27) intron (NM_001142699, intron 18 of 27) -56285 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr15-2662 chr15 76286225 76286435 + 9.43 0.000 intron (NM_000126, intron 6 of 11) intron (NM_000126, intron 6 of 11) 25139 NM_001127716 2108 Hs.39925 NM_000126 ENSG00000140374 ETFA EMA|GA2|MADD electron transfer flavoprotein subunit alpha protein-coding chr14-4752 chr14 62163200 62163410 + 9.43 0.000 Intergenic Intergenic -23332 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr8-4546 chr8 124665189 124665399 + 9.43 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 63179 NM_001363299 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr4-4800 chr4 104723136 104723346 + 9.43 0.000 Intergenic L1ME3A|LINE|L1 -228347 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr4-3139 chr4 176538459 176538669 + 9.43 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 218598 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr2-7489 chr2 17581845 17582055 + 9.43 0.000 intron (NM_001366806, intron 1 of 3) intron (NM_001366806, intron 1 of 3) 41254 NM_003385 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr11-2063 chr11 73624835 73625045 + 9.43 0.000 Intergenic AluSc|SINE|Alu -21641 NM_001130033 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chrX-1862 chrX 115581769 115581979 + 9.43 0.000 intron (NM_001282337, intron 1 of 17) intron (NM_001282337, intron 1 of 17) -11677 NM_001282338 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr5-5441 chr5 138144726 138144936 + 9.43 0.000 intron (NM_139199, intron 25 of 26) AluJb|SINE|Alu -5403 NM_003551 8382 Hs.730856 NM_003551 ENSG00000112981 NME5 NM23-H5|NM23H5|RSPH23 NME/NM23 family member 5 protein-coding chr7-5915 chr7 98166054 98166264 + 9.43 0.000 intron (NM_014916, intron 6 of 13) intron (NM_014916, intron 6 of 13) -46095 NM_177455 168620 Hs.511979 NM_177455 ENSG00000180535 BHLHA15 BHLHB8|MIST1 basic helix-loop-helix family member a15 protein-coding chr3-7448 chr3 127562633 127562843 + 9.43 0.000 Intergenic Charlie1a|DNA|hAT-Charlie 12593 NR_106883 102466199 NR_106883 ENSG00000275067 MIR6825 hsa-mir-6825 microRNA 6825 ncRNA chr11-5914 chr11 14106773 14106983 + 9.43 0.000 intron (NM_006108, intron 5 of 15) intron (NM_006108, intron 5 of 15) 144155 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr17-2669 chr17 32551279 32551489 + 9.43 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 64391 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr15-3044 chr15 59794862 59795072 + 9.43 0.000 Intergenic Intergenic -105647 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr1-7406 chr1 37119225 37119435 + 9.43 0.000 Intergenic Intergenic -42233 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr7-4321 chr7 36839151 36839361 + 9.43 0.000 Intergenic Intergenic 80176 NR_031604 100302113 NR_031604 ENSG00000221325 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA chr8-6273 chr8 41762117 41762327 + 9.43 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 35400 NM_000037 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chrX-3300 chrX 112296205 112296415 + 9.43 0.000 intron (NM_001004308, intron 2 of 2) intron (NM_001004308, intron 2 of 2) 213285 NM_001004308 340595 Hs.368140 NM_001004308 ENSG00000187823 RTL4 Mar4|Mart4|SIRH11|ZCCHC16 retrotransposon Gag like 4 protein-coding chr7-9178 chr7 115221998 115222208 + 9.43 0.000 intron (NR_126407, intron 1 of 4) intron (NR_126407, intron 1 of 4) 9252 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr4-4516 chr4 64051344 64051554 + 9.43 0.000 Intergenic Intergenic 358001 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr17-5696 chr17 53061353 53061563 + 9.43 0.000 Intergenic LTR22B1|LTR|ERVK 75953 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding chr6-8183 chr6 133000897 133001107 + 9.43 0.000 Intergenic LTR69|LTR|ERVL -87078 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr1-13912 chr1 22301870 22302080 + 9.43 0.000 Intergenic L1PA13|LINE|L1 35736 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr22-1079 chr22 26030073 26030283 + 9.43 0.000 intron (NM_001318245, intron 43 of 43) AluJo|SINE|Alu -139284 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr4-4751 chr4 96028325 96028535 + 9.43 0.000 Intergenic Intergenic 188337 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding chr10-1759 chr10 24947469 24947679 + 9.43 0.000 intron (NM_020200, intron 1 of 8) intron (NM_020200, intron 1 of 8) 5032 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr12-3108 chr12 26053401 26053611 + 9.43 0.000 intron (NM_001164746, intron 1 of 4) intron (NM_001164746, intron 1 of 4) 942 NM_001164746 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr16-5942 chr16 3728164 3728374 + 9.43 0.000 exon (NM_001079846, exon 30 of 30) exon (NM_001079846, exon 30 of 30) -10745 NM_001272049 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr11-5569 chr11 102725207 102725417 + 9.43 0.000 promoter-TSS (NM_002424) promoter-TSS (NM_002424) -358 NM_001304442 4317 Hs.161839 NM_002424 ENSG00000118113 MMP8 CLG1|HNC|MMP-8|PMNL-CL matrix metallopeptidase 8 protein-coding chr1-14042 chr1 27620704 27620914 + 9.43 0.000 intron (NM_001042747, intron 5 of 12) AluJb|SINE|Alu 5431 NM_001042747 2268 Hs.1422 NM_005248 ENSG00000000938 FGR SRC2|c-fgr|c-src2|p55-Fgr|p55c-fgr|p58-Fgr|p58c-fgr FGR proto-oncogene, Src family tyrosine kinase protein-coding chr6-2752 chr6 111573288 111573498 + 9.43 0.000 intron (NM_147686, intron 4 of 8) intron (NM_147686, intron 4 of 8) -6114 NM_001164283 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr2-9354 chr2 227201935 227202145 + 9.43 0.000 intron (NM_000091, intron 1 of 51) intron (NM_000091, intron 1 of 51) 37475 NM_000091 1285 Hs.570065 NM_000091 ENSG00000169031 COL4A3 ATS2|ATS3 collagen type IV alpha 3 chain protein-coding chr6-8127 chr6 128710208 128710418 + 9.43 0.000 Intergenic Intergenic -172825 NM_001079823 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr12-6843 chr12 14704098 14704308 + 9.43 0.000 Intergenic Intergenic -7604 NM_004963 2984 Hs.524278 NM_004963 ENSG00000070019 GUCY2C DIAR6|GC-C|GUC2C|MECIL|MUCIL|STAR guanylate cyclase 2C protein-coding chr11-5862 chr11 10087311 10087521 + 9.43 0.000 intron (NM_030962, intron 2 of 39) intron (NM_030962, intron 2 of 39) 206791 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chrX-2181 chrX 39172684 39172894 + 9.43 0.000 Intergenic Intergenic 154573 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr4-2643 chr4 169975328 169975538 + 9.43 0.000 intron (NR_037878, intron 1 of 4) intron (NR_037878, intron 1 of 4) 469 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr13-864 chr13 20377935 20378145 + 9.43 0.000 Intergenic Intergenic 55806 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr12-6046 chr12 112031482 112031692 + 9.43 0.000 intron (NM_024953, intron 23 of 23) intron (NM_024953, intron 23 of 23) 6128 NR_037430 100500889 NR_037430 ENSG00000266370 MIR3657 - microRNA 3657 ncRNA chr17-5208 chr17 15965100 15965310 + 9.43 0.000 intron (NM_000676, intron 1 of 1) intron (NM_000676, intron 1 of 1) 20288 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr19-6695 chr19 35598635 35598845 + 9.43 0.000 intron (NR_110750, intron 1 of 2) LOR1-int|LTR|ERV1 845 NR_110750 102723617 Hs.579904 NR_110750 ENSG00000224910 LINC01766 - long intergenic non-protein coding RNA 1766 ncRNA chr17-7096 chr17 71128373 71128583 + 9.43 0.000 intron (NR_104152, intron 3 of 3) intron (NR_104152, intron 3 of 3) 73701 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr5-4736 chr5 44200911 44201121 + 9.43 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -187716 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr7-6174 chr7 128427409 128427619 + 9.43 0.000 Intergenic MER119|DNA|hAT-Charlie -17532 NM_001142576 3614 Hs.654401 NM_000883 ENSG00000106348 IMPDH1 IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608 inosine monophosphate dehydrogenase 1 protein-coding chr10-1409 chr10 100997612 100997822 + 9.43 0.000 promoter-TSS (NM_001318099) promoter-TSS (NM_001318099) -562 NM_001318099 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr11-3211 chr11 66983882 66984092 + 9.43 0.000 Intergenic Intergenic 8683 NM_001353554 254439 Hs.232604 NM_001136485 ENSG00000173237 C11orf86 - chromosome 11 open reading frame 86 protein-coding chr20-2634 chr20 42886880 42887090 + 9.43 0.000 intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) -81758 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA chr2-7090 chr2 173364407 173364617 + 9.43 0.000 intron (NM_031942, intron 5 of 9) intron (NM_031942, intron 5 of 9) 9640 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr8-4356 chr8 101264205 101264415 + 9.43 0.000 Intergenic Intergenic -58246 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chrX-1603 chrX 97685874 97686084 + 9.43 0.000 Intergenic Intergenic -121444 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr1-7009 chr1 169427059 169427269 + 9.43 0.000 intron (NM_001300968, intron 2 of 6) intron (NM_001300968, intron 2 of 6) 310 NM_021179 57821 Hs.567557 NM_021179 ENSG00000117477 CCDC181 C1orf114 coiled-coil domain containing 181 protein-coding chr5-4513 chr5 13800504 13800714 + 9.43 0.000 intron (NM_001369, intron 47 of 78) intron (NM_001369, intron 47 of 78) 143871 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr8-3556 chr8 126660868 126661078 + 9.43 0.000 Intergenic LTR32|LTR|ERVL -102495 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr1-7393 chr1 30929555 30929765 + 9.43 0.000 Intergenic Intergenic 6116 NR_004054 692234 NR_004054 SNORD103A U103 small nucleolar RNA, C/D box 103A snoRNA chr3-7147 chr3 185514454 185514664 + 9.43 0.000 intron (NM_139248, intron 7 of 9) intron (NM_139248, intron 7 of 9) -15524 NM_080652 90407 Hs.677570 NM_080652 ENSG00000163900 TMEM41A 2900010K02Rik transmembrane protein 41A protein-coding chr16-3108 chr16 68668506 68668716 + 9.43 0.000 intron (NM_001793, intron 2 of 15) intron (NM_001793, intron 2 of 15) 23301 NM_001317195 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr14-2964 chr14 50128760 50128970 + 9.43 0.000 intron (NM_006939, intron 21 of 22) AluJr|SINE|Alu -12293 NM_024558 79609 Hs.558541 NM_024558 ENSG00000100483 VCPKMT C14orf138|METTL21D|VCP-KMT valosin containing protein lysine methyltransferase protein-coding chr19-2236 chr19 46466509 46466719 + 9.43 0.000 3' UTR (NM_001103149, exon 3 of 3) 3' UTR (NM_001103149, exon 3 of 3) 4949 NM_001103149 55228 Hs.8395 NM_018215 ENSG00000182013 PNMA8A PNMAL1 PNMA family member 8A protein-coding chr19-2839 chr19 1968471 1968681 + 9.43 0.000 intron (NM_001319, intron 1 of 11) intron (NM_001319, intron 1 of 11) -14027 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr12-4903 chr12 66628118 66628328 + 9.43 0.000 intron (NM_001366724, intron 1 of 23) L2c|LINE|L2 50853 NM_001366722 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr21-503 chr21 31660279 31660489 + 9.43 0.000 intron (NM_000454, intron 1 of 4) MER58C|DNA|hAT-Charlie 762 NM_000454 6647 Hs.443914 NM_000454 ENSG00000142168 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1 protein-coding chr18-1357 chr18 7748188 7748398 + 9.43 0.000 intron (NM_002845, intron 1 of 30) MER3|DNA|hAT-Charlie 180977 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr16-6154 chr16 23222884 23223094 + 9.43 0.000 Intergenic Intergenic 40244 NM_001039 6340 Hs.371727 NM_001039 ENSG00000166828 SCNN1G BESC3|ENaCg|ENaCgamma|LDLS2|PHA1|SCNEG sodium channel epithelial 1 gamma subunit protein-coding chr2-4585 chr2 96947449 96947659 + 9.43 0.000 intron (NM_001122646, intron 8 of 16) intron (NM_001122646, intron 8 of 16) 28448 NR_110209 101927053 Hs.677537 NR_110209 LOC101927053 - uncharacterized LOC101927053 ncRNA chr4-3416 chr4 61065059 61065269 + 9.43 0.000 Intergenic Intergenic -78492 NR_147148 105377249 Hs.575120 NR_147148 ENSG00000240152 LINC02271 - long intergenic non-protein coding RNA 2271 ncRNA chr5-5074 chr5 95673097 95673307 + 9.43 0.000 intron (NR_125330, intron 2 of 7) LTR40A1|LTR|ERVL 9789 NR_125330 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr1-9516 chr1 38665696 38665906 + 9.43 0.000 Intergenic L1ME1|LINE|L1 190605 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chrX-1416 chrX 28586862 28587072 + 9.43 0.000 promoter-TSS (NM_014271) promoter-TSS (NM_014271) -479 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr11-2195 chr11 13332826 13333036 + 9.43 0.000 intron (NM_001351821, intron 3 of 19) intron (NM_001351821, intron 3 of 19) 55204 NM_001351822 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr9-3331 chr9 96278883 96279093 + 9.43 0.000 intron (NM_000197, intron 2 of 10) LTR82B|LTR|ERVL 23188 NM_000197 3293 Hs.477 NM_000197 ENSG00000130948 HSD17B3 EDH17B3|SDR12C2 hydroxysteroid 17-beta dehydrogenase 3 protein-coding chr9-6769 chr9 24651573 24651783 + 9.43 0.000 Intergenic L1M3a|LINE|L1 -105781 NM_001365008 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr8-4549 chr8 125029825 125030035 + 9.43 0.000 intron (NM_014846, intron 27 of 28) intron (NM_014846, intron 27 of 28) 31425 NM_003129 6713 Hs.71465 NM_003129 ENSG00000104549 SQLE - squalene epoxidase protein-coding chr4-8703 chr4 182031578 182031788 + 9.43 0.000 Intergenic L1PA10|LINE|L1 112832 NR_125905 90768 Hs.175465 NR_027107 TENM3-AS1 - TENM3 antisense RNA 1 ncRNA chr17-1090 chr17 48908996 48909206 + 9.43 0.000 promoter-TSS (NR_135674) promoter-TSS (NR_135674) -118 NR_135674 105371814 Hs.655254 NR_135674 ENSG00000248278 LOC105371814 - uncharacterized LOC105371814 ncRNA chr18-1712 chr18 2625341 2625551 + 9.43 0.000 Intergenic HERV16-int|LTR|ERVL 29949 NR_033754 645158 Hs.712861 NR_033754 ENSG00000266405 CBX3P2 - chromobox 3 pseudogene 2 pseudo chr18-2371 chr18 60892408 60892618 + 9.43 0.000 Intergenic MLT2B3|LTR|ERVL -440917 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr13-1146 chr13 31518669 31518879 + 9.43 0.000 Intergenic Intergenic -220752 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr20-1959 chr20 34426085 34426295 + 9.43 0.000 intron (NM_001257137, intron 8 of 25) intron (NM_001257137, intron 8 of 25) -40135 NR_030374 693229 NR_030374 ENSG00000207997 MIR644A MIR644|MIRN644|hsa-mir-644|hsa-mir-644a microRNA 644a ncRNA chr13-1514 chr13 21232204 21232414 + 9.43 0.000 Intergenic Intergenic -2259 NR_125745 103689843 Hs.524902 NR_125745 ENSG00000233405 LINC01046 - long intergenic non-protein coding RNA 1046 ncRNA chr8-4071 chr8 66042165 66042375 + 9.43 0.000 intron (NM_033105, intron 1 of 5) intron (NM_033105, intron 1 of 5) 20717 NM_033105 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr14-1855 chr14 69505169 69505379 + 9.43 0.000 intron (NM_001161498, intron 6 of 12) intron (NM_001161498, intron 6 of 12) 20546 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr1-6057 chr1 88504580 88504790 + 9.43 0.000 Intergenic L2a|LINE|L2 -179459 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr10-7485 chr10 11267097 11267307 + 9.43 0.000 intron (NM_001025076, intron 6 of 13) intron (NM_001025076, intron 6 of 13) 77472 NR_126062 414196 Hs.729598 NM_001012713 CELF2-AS1 C10orf31 CELF2 antisense RNA 1 ncRNA chr4-4057 chr4 3346057 3346267 + 9.43 0.000 intron (NM_002926, intron 3 of 16) MER65-int|LTR|ERV1 -24036 NM_198227 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr2-9836 chr2 160910806 160911016 + 9.43 0.000 Intergenic Intergenic -226044 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr5-5184 chr5 111585389 111585599 + 9.43 0.000 intron (NR_040093, intron 1 of 6) intron (NR_040093, intron 1 of 6) -72897 NR_131752 134429 Hs.93842 NM_139164 ENSG00000164211 STARD4 - StAR related lipid transfer domain containing 4 protein-coding chr2-1432 chr2 213742450 213742660 + 9.43 0.000 intron (NR_047660, intron 9 of 14) AluSq2|SINE|Alu -15512 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr13-2442 chr13 48125990 48126200 + 9.43 0.000 Intergenic Intergenic -30954 NM_001270629 29079 Hs.181112 NM_014166 ENSG00000136146 MED4 ARC36|DRIP36|HSPC126|TRAP36|VDRIP mediator complex subunit 4 protein-coding chr20-2532 chr20 35497838 35498048 + 9.43 0.000 exon (NM_001318219, exon 24 of 33) exon (NM_001318219, exon 24 of 33) 31709 NR_026933 140873 Hs.158680 NM_080828 ENSG00000125975 C20orf173 dJ477O4.4 chromosome 20 open reading frame 173 protein-coding chr17-5517 chr17 42568891 42569101 + 9.43 0.000 intron (NM_198204, intron 4 of 7) intron (NM_198204, intron 4 of 7) 1936 NM_198204 6945 Hs.383019 NM_170607 ENSG00000108788 MLX MAD7|MXD7|TCFL4|TF4|bHLHd13 MAX dimerization protein MLX protein-coding chr2-14052 chr2 195985183 195985393 + 9.43 0.000 intron (NM_018897, intron 14 of 64) intron (NM_018897, intron 14 of 64) 83549 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr13-2541 chr13 62774939 62775149 + 9.43 0.000 intron (NR_047029, intron 2 of 7) L1MC5|LINE|L1 21648 NR_047029 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chrX-2860 chrX 141643085 141643295 + 9.43 0.000 intron (NR_037183, intron 3 of 3) intron (NR_037183, intron 3 of 3) 17326 NM_001318917 645188 Hs.679802 NM_001318917 LOC645188 SPANX-L uncharacterized LOC645188 protein-coding chr1-4878 chr1 33365259 33365469 + 9.43 0.000 intron (NM_198040, intron 6 of 13) intron (NM_198040, intron 6 of 13) 10229 NM_001330488 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr9-5527 chr9 107637028 107637238 + 9.43 0.000 Intergenic MIRb|SINE|MIR -147364 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr15-3302 chr15 78312713 78312923 + 9.43 0.000 Intergenic LTR16E2|LTR|ERVL -13209 NM_001303247 80349 Hs.513055 NM_025234 ENSG00000140395 WDR61 REC14|SKI8 WD repeat domain 61 protein-coding chr15-2892 chr15 42410320 42410530 + 9.43 0.000 intron (NM_173089, intron 4 of 8) intron (NM_173089, intron 4 of 8) 5646 NM_173089 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr2-9222 chr2 218036792 218037002 + 9.43 0.000 intron (NR_034176, intron 2 of 13) MER65-int|LTR|ERV1 1963 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr14-2670 chr14 73593925 73594135 + 9.43 0.000 intron (NM_152331, intron 2 of 2) intron (NM_152331, intron 2 of 2) 2324 NM_152331 122970 Hs.49433 NM_152331 ENSG00000177465 ACOT4 PTE-Ib|PTE1B|PTE2B acyl-CoA thioesterase 4 protein-coding chr18-1995 chr18 40665755 40665965 + 9.43 0.000 Intergenic THE1C|LTR|ERVL-MaLR 599574 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr3-6882 chr3 153819164 153819374 + 9.43 0.000 Intergenic L2|LINE|L2 -56743 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr13-2252 chr13 26407007 26407217 + 9.43 0.000 Intergenic L2a|LINE|L2 -150571 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr4-8081 chr4 123304355 123304565 + 9.43 0.000 intron (NM_001345856, intron 15 of 15) intron (NM_001345856, intron 15 of 15) -92335 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr10-3466 chr10 59873101 59873311 + 9.43 0.000 intron (NM_005436, intron 1 of 8) MLT1C|LTR|ERVL-MaLR 33350 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding chr13-2784 chr13 100502711 100502921 + 9.43 0.000 intron (NR_148027, intron 22 of 23) Tigger20a|DNA|TcMar-Tigger -21801 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr3-10735 chr3 155480482 155480692 + 9.43 0.000 3' UTR (NM_001349251, exon 23 of 23) 3' UTR (NM_001349251, exon 23 of 23) -5216 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr13-903 chr13 46757010 46757220 + 9.43 0.000 Intergenic LTR16C|LTR|ERVL 40046 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr5-6587 chr5 27349831 27350041 + 9.43 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -122356 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr14-2847 chr14 28997294 28997504 + 9.43 0.000 Intergenic L1PREC2|LINE|L1 -211612 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr13-3120 chr13 74640693 74640903 + 9.43 0.000 Intergenic Intergenic 87955 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr8-4483 chr8 118207210 118207420 + 9.43 0.000 intron (NM_001101676, intron 4 of 4) intron (NM_001101676, intron 4 of 4) -95496 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr12-7299 chr12 53754611 53754821 + 9.43 0.000 intron (NR_104332, intron 2 of 2) intron (NR_104332, intron 2 of 2) 2318 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr5-5120 chr5 102536957 102537167 + 9.43 0.000 Intergenic L1M4b|LINE|L1 -38061 NM_001308014 133482 Hs.388874 NM_173488 ENSG00000205359 SLCO6A1 CT48|GST|OATP-I|OATP6A1|OATPY solute carrier organic anion transporter family member 6A1 protein-coding chr1-14791 chr1 70991331 70991541 + 9.43 0.000 intron (NM_198719, intron 2 of 3) intron (NM_198719, intron 2 of 3) -55070 NR_038420 100132618 Hs.720513 NR_038420 ZRANB2-AS1 - ZRANB2 antisense RNA 1 ncRNA chr4-8100 chr4 125108670 125108880 + 9.43 0.000 Intergenic L1MB4|LINE|L1 -207637 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr13-2040 chr13 47890244 47890454 + 9.43 0.000 Intergenic Intergenic 42273 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr6-7893 chr6 108113708 108113918 + 9.43 0.000 Intergenic Intergenic -9820 NR_145458 100287366 Hs.221513 NR_145458 ENSG00000225174 OSTM1-AS1 - OSTM1 antisense RNA 1 ncRNA chr12-4602 chr12 38366393 38366603 + 9.43 0.000 Intergenic Intergenic 49724 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr6-5992 chr6 97746363 97746573 + 9.43 0.000 Intergenic L1MC1|LINE|L1 -278063 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr13-2063 chr13 53501881 53502091 + 9.43 0.000 Intergenic L1PB4|LINE|L1 -313433 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr5-5544 chr5 147280894 147281104 + 9.43 0.000 intron (NM_001112724, intron 4 of 12) L1PB1|LINE|L1 45973 NM_001112724 202374 Hs.585069 NM_145001 ENSG00000169302 STK32A YANK1 serine/threonine kinase 32A protein-coding chr7-7383 chr7 66908012 66908222 + 9.43 0.000 Intergenic HERVL-int|LTR|ERVL 3997 NR_136637 644794 Hs.552124 NR_136637 LINC02604 lncHERG long intergenic non-protein coding RNA 2604 ncRNA chr19-2386 chr19 5544658 5544868 + 9.43 0.000 Intergenic AluSx1|SINE|Alu 23271 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr6-5500 chr6 163756094 163756304 + 9.43 0.000 Intergenic L1MB2|LINE|L1 -84715 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr6-1830 chr6 154721583 154721793 + 9.43 0.000 Intergenic Intergenic -11690 NM_001286189 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr2-13382 chr2 138220278 138220488 + 9.43 0.000 Intergenic Intergenic 118499 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr1-6582 chr1 35539855 35540065 + 9.43 0.000 intron (NM_024874, intron 2 of 20) intron (NM_024874, intron 2 of 20) 17443 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr2-6722 chr2 28508594 28508804 + 9.43 0.000 intron (NM_001170585, intron 1 of 56) intron (NM_001170585, intron 1 of 56) 12628 NM_001170585 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2-13022 chr2 108047624 108047834 + 9.43 0.000 Intergenic ERVL-E-int|LTR|ERVL 5026 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA chr3-8416 chr3 107443799 107444009 + 9.43 0.000 intron (NR_110039, intron 1 of 2) MER124|DNA?|DNA? 12974 NR_110039 101929607 Hs.252565 NR_110039 ENSG00000273125 LINC01990 - long intergenic non-protein coding RNA 1990 ncRNA chr12-4994 chr12 79075102 79075312 + 9.43 0.000 intron (NM_005639, intron 3 of 10) intron (NM_005639, intron 3 of 10) 29515 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr12-4058 chr12 51941941 51942151 + 9.43 0.000 Intergenic L2b|LINE|L2 -9653 NM_004302 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr5-4434 chr5 2214303 2214513 + 9.43 0.000 Intergenic Intergenic 97793 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr15-4422 chr15 44926509 44926719 + 9.43 0.000 Intergenic AluSc5|SINE|Alu -30073 NM_152448 145645 Hs.567701 NM_152448 ENSG00000167014 TERB2 C15orf43 telomere repeat binding bouquet formation protein 2 protein-coding chr2-4612 chr2 133733945 133734155 + 9.43 0.000 Intergenic MER81|DNA|hAT-Blackjack -165587 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr7-3498 chr7 3893132 3893342 + 9.43 0.000 intron (NM_152744, intron 5 of 44) L3|LINE|CR1 -236448 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr3-9469 chr3 50128244 50128454 + 9.43 0.000 intron (NR_135301, intron 2 of 3) intron (NR_135301, intron 2 of 3) -26709 NM_001318798 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chr18-1461 chr18 49873231 49873441 + 9.43 0.000 intron (NM_001080467, intron 26 of 39) intron (NM_001080467, intron 26 of 39) 59313 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr19-2576 chr19 1055129 1055339 + 9.43 0.000 exon (NM_019112, exon 30 of 47) exon (NM_019112, exon 30 of 47) -10725 NM_001258328 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr18-2174 chr18 59258959 59259169 + 9.43 0.000 Intergenic L1PA4|LINE|L1 14390 NM_013435 30062 Hs.278957 NM_013435 ENSG00000134438 RAX MCOP3|RX retina and anterior neural fold homeobox protein-coding chr19-3363 chr19 11050494 11050704 + 9.43 0.000 intron (NM_001128846, intron 28 of 32) intron (NM_001128846, intron 28 of 32) -38763 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr22-2550 chr22 26201477 26201687 + 9.43 0.000 intron (NM_001184776, intron 1 of 14) AluSz|SINE|Alu 32108 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr17-7276 chr17 3444364 3444574 + 9.43 0.000 intron (NM_001321336, intron 7 of 8) intron (NM_001321336, intron 7 of 8) -10628 NM_003554 8388 Hs.533931 NM_003554 ENSG00000127780 OR1E2 OR17-135|OR17-136|OR17-93|OR1E4|OR1E7|OST529 olfactory receptor family 1 subfamily E member 2 protein-coding chrX-2162 chrX 38010166 38010376 + 9.43 0.000 intron (NM_138780, intron 1 of 16) intron (NM_138780, intron 1 of 16) 3718 NM_138780 94122 Hs.662334 NM_138780 ENSG00000147041 SYTL5 slp5 synaptotagmin like 5 protein-coding chr7-6102 chr7 119284185 119284395 + 9.43 0.000 Intergenic L1P3|LINE|L1 623085 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr1-7239 chr1 225842442 225842652 + 9.43 0.000 intron (NM_001136018, intron 7 of 8) intron (NM_001136018, intron 7 of 8) 17193 NM_000120 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr2-5994 chr2 73706546 73706756 + 9.43 0.000 Intergenic Intergenic -5311 NR_132338 51471 Hs.278983 NM_016347 ENSG00000204872 NAT8B CML2|Hcml2|NAT8BP N-acetyltransferase 8B (putative, gene/pseudogene) protein-coding chr2-11777 chr2 13613000 13613210 + 9.43 0.000 Intergenic L1ME3C|LINE|L1 -606092 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chrX-1284 chrX 111441883 111442093 + 9.43 0.000 Intergenic Intergenic -29796 NM_001195553 1641 Hs.34780 NM_000555 ENSG00000077279 DCX DBCN|DC|LISX|SCLH|XLIS doublecortin protein-coding chr17-2733 chr17 75809325 75809535 + 9.43 0.000 intron (NM_001080419, intron 1 of 15) intron (NM_001080419, intron 1 of 15) 24591 NR_038131 85451 Hs.584768 NM_001080419 ENSG00000132478 UNK UNKEMPT|ZC3H5|ZC3HDC5 unk zinc finger protein-coding chr4-7300 chr4 53878086 53878296 + 9.43 0.000 Intergenic L1PA2|LINE|L1 109091 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chrX-4444 chrX 55277617 55277827 + 9.43 0.000 Intergenic L1P3|LINE|L1 -2366 NR_130179 100421746 Hs.662612 NR_130179 ENSG00000232765 LOC100421746 - PAGE family member 5 pseudogene pseudo chr14-1081 chr14 22871744 22871954 + 9.43 0.000 5' UTR (NM_014045, exon 1 of 7) 5' UTR (NM_014045, exon 1 of 7) 109 NM_001329226 26020 Hs.525232 NM_014045 ENSG00000197324 LRP10 LRP-10|LRP9|MST087|MSTP087 LDL receptor related protein 10 protein-coding chrX-2555 chrX 100743240 100743450 + 9.43 0.000 Intergenic Intergenic -11224 NM_001370162 94121 Hs.592224 NM_080737 ENSG00000102362 SYTL4 SLP4 synaptotagmin like 4 protein-coding chrX-1906 chrX 138257417 138257627 + 9.43 0.000 Intergenic Intergenic 410271 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr17-7286 chr17 3879404 3879614 + 9.43 0.000 intron (NM_172206, intron 9 of 15) L2b|LINE|L2 11234 NM_172206 84254 Hs.8417 NM_032294 ENSG00000004660 CAMKK1 CAMKKA calcium/calmodulin dependent protein kinase kinase 1 protein-coding chr9-2648 chr9 33722042 33722252 + 9.43 0.000 Intergenic Intergenic 16269 NR_109755 101929688 Hs.372465 NR_109755 ENSG00000233776 LINC01251 - long intergenic non-protein coding RNA 1251 ncRNA chr16-4234 chr16 19303877 19304087 + 9.43 0.000 intron (NM_001256720, intron 2 of 4) intron (NM_001256720, intron 2 of 4) 18251 NM_001256720 728276 Hs.632180 NM_001256720 ENSG00000261210 CLEC19A - C-type lectin domain containing 19A protein-coding chr6-1896 chr6 169723077 169723287 + 9.43 0.000 intron (NM_018288, intron 1 of 11) intron (NM_018288, intron 1 of 11) 828 NM_133325 55274 Hs.435933 NM_018288 ENSG00000130024 PHF10 BAF45A|XAP135 PHD finger protein 10 protein-coding chrX-2089 chrX 22547046 22547256 + 9.43 0.000 intron (NR_073010, intron 4 of 11) intron (NR_073010, intron 4 of 11) 274238 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chrX-2420 chrX 75523678 75523888 + 9.43 0.000 promoter-TSS (NM_144969) promoter-TSS (NM_144969) -281 NM_001146256 158866 Hs.253211 NM_144969 ENSG00000102383 ZDHHC15 DHHC15|MRX91 zinc finger DHHC-type containing 15 protein-coding chr5-3742 chr5 38007301 38007511 + 9.43 0.000 Intergenic THE1C|LTR|ERVL-MaLR -18291 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr4-1873 chr4 766222 766432 + 9.43 0.000 3' UTR (NM_006315, exon 11 of 11) 3' UTR (NM_006315, exon 11 of 11) 15521 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr19-2338 chr19 44749797 44750007 + 9.43 0.000 intron (NM_005178, intron 1 of 8) intron (NM_005178, intron 1 of 8) 1194 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr3-6104 chr3 53016286 53016496 + 9.43 0.000 intron (NM_016329, intron 1 of 20) L1M5|LINE|L1 29682 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr10-1908 chr10 124468200 124468410 + 9.43 0.000 intron (NM_001318332, intron 1 of 5) intron (NM_001318332, intron 1 of 5) 6482 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr8-4468 chr8 116936489 116936699 + 9.43 0.000 Intergenic Intergenic -1613 NM_001025357 441376 Hs.437551 NM_001025357 ENSG00000205002 AARD C8orf85 alanine and arginine rich domain containing protein protein-coding chr10-3145 chr10 68764253 68764463 + 9.43 0.000 intron (NR_104262, intron 15 of 23) AluJo|SINE|Alu 9186 NR_003076 692211 NR_003076 ENSG00000283551 SNORD98 HBII-419 small nucleolar RNA, C/D box 98 snoRNA chr2-8699 chr2 152468055 152468265 + 9.43 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 132986 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr6-3258 chr6 149713675 149713885 + 9.43 0.000 intron (NM_001350340, intron 1 of 8) AluSq2|SINE|Alu 2645 NR_073033 9113 Hs.549084 NM_004690 ENSG00000131023 LATS1 WARTS|wts large tumor suppressor kinase 1 protein-coding chr1-4715 chr1 1520510 1520720 + 9.43 0.000 exon (NM_018188, exon 7 of 16) exon (NM_018188, exon 7 of 16) 8085 NM_001170536 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr11-4154 chr11 47093520 47093730 + 9.43 0.000 intron (NM_001003677, intron 3 of 8) MIR|SINE|MIR 83254 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr22-3645 chr22 22081707 22081917 + 9.43 0.000 Intergenic Intergenic -37878 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr14-5208 chr14 95910438 95910648 + 9.43 0.000 intron (NR_132398, intron 2 of 2) intron (NR_132398, intron 2 of 2) 33771 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr10-8259 chr10 75624552 75624762 + 9.43 0.000 intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) -22852 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr22-1708 chr22 16845762 16845972 + 9.43 0.000 Intergenic Intergenic 18393 NR_003607 27437 Hs.143955 NR_003607 ENSG00000229027 HSFY1P1 CECR8|HSFYL1|HSFYP1|NCRNA00016 HSFY1 pseudogene 1 pseudo chr7-6216 chr7 131170527 131170737 + 9.43 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 60538 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr21-1270 chr21 27201267 27201477 + 9.43 0.000 Intergenic L2c|LINE|L2 -234284 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr21-860 chr21 34105485 34105695 + 9.43 0.000 3' UTR (NM_006933, exon 2 of 2) 3' UTR (NM_006933, exon 2 of 2) 32012 NM_006933 6526 Hs.302742 NM_006933 ENSG00000198743 SLC5A3 BCW2|SMIT|SMIT1|SMIT2 solute carrier family 5 member 3 protein-coding chr6-2943 chr6 33980320 33980530 + 9.43 0.000 Intergenic Intergenic 19626 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr11-5103 chr11 119728234 119728444 + 9.43 0.000 intron (NM_203285, intron 1 of 7) CpG 861 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr17-5217 chr17 16494911 16495121 + 9.43 0.000 Intergenic Intergenic -2823 NM_207387 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr17-7967 chr17 48036452 48036662 + 9.43 0.000 TTS (NR_029687) TTS (NR_029687) 690 NR_029687 406943 NR_029687 ENSG00000207947 MIR152 MIRN152|mir-152 microRNA 152 ncRNA chr11-3188 chr11 64623526 64623736 + 9.43 0.000 intron (NM_138732, intron 17 of 19) intron (NM_138732, intron 17 of 19) 19914 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chrX-4566 chrX 70052852 70053062 + 9.43 0.000 Intergenic L2a|LINE|L2 -3019 NM_001002254 158835 Hs.661507 NM_001002254 ENSG00000147160 AWAT2 ARAT|DC4|DGAT2L4|MFAT|WS acyl-CoA wax alcohol acyltransferase 2 protein-coding chr2-7424 chr2 10243403 10243613 + 9.43 0.000 Intergenic L2b|LINE|L2 -50837 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr20-2119 chr20 33187911 33188121 + 9.43 0.000 Intergenic MER51B|LTR|ERV1 -5589 NR_026760 317716 Hs.434194 NM_173859 ENSG00000183566 BPIFA4P BASE BPI fold containing family A member 4, pseudogene pseudo chr13-2645 chr13 79392944 79393154 + 9.43 0.000 intron (NM_022118, intron 1 of 20) L1MEf|LINE|L1 13172 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr16-4842 chr16 87795207 87795417 + 9.43 0.000 Intergenic Intergenic -16164 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA chr5-4494 chr5 10421030 10421240 + 9.43 0.000 intron (NM_001270660, intron 21 of 24) intron (NM_001270660, intron 21 of 24) 18771 NR_162106 113218502 NR_162106 MIR10397 - microRNA 10397 ncRNA chr1-7732 chr1 30460914 30461124 + 9.43 0.000 Intergenic Intergenic -257753 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr6-3835 chr6 39610784 39610994 + 9.43 0.000 intron (NM_001289020, intron 6 of 21) intron (NM_001289020, intron 6 of 21) 114519 NM_001289020 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr3-5666 chr3 12599186 12599396 + 9.43 0.000 intron (NR_148940, intron 10 of 17) intron (NR_148940, intron 10 of 17) 42204 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr16-3013 chr16 30485989 30486199 + 9.43 0.000 intron (NM_002209, intron 9 of 30) intron (NM_002209, intron 9 of 30) 13352 NM_002209 3683 Hs.174103 NM_002209 ENSG00000005844 ITGAL CD11A|LFA-1|LFA1A integrin subunit alpha L protein-coding chr15-1947 chr15 27699062 27699272 + 9.43 0.000 Intergenic MSTB|LTR|ERVL-MaLR 400148 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr22-1613 chr22 23736982 23737192 + 9.43 0.000 Intergenic Intergenic 14025 NM_021916 7621 Hs.382874 NM_021916 ENSG00000187792 ZNF70 Cos17 zinc finger protein 70 protein-coding chrX-909 chrX 130118648 130118858 + 9.43 0.000 Intergenic Intergenic -7862 NM_001127197 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr8-5522 chr8 65412617 65412827 + 9.43 0.000 Intergenic Intergenic 149944 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr3-6353 chr3 84021220 84021430 + 9.43 0.000 Intergenic L1M4c|LINE|L1 848250 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr10-2893 chr10 110408162 110408372 + 9.43 0.000 Intergenic Intergenic -89640 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr9-4569 chr9 89697463 89697673 + 9.43 0.000 intron (NR_024280, intron 3 of 5) intron (NR_024280, intron 3 of 5) 57785 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr7-4654 chr7 32043936 32044146 + 9.43 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 26366 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr11-3622 chr11 72599751 72599961 + 9.43 0.000 intron (NM_001143839, intron 3 of 29) intron (NM_001143839, intron 3 of 29) 15274 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chr1-8015 chr1 224887826 224888036 + 9.43 0.000 Intergenic HERVH-int|LTR|ERV1 -41723 NM_144989 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr11-5937 chr11 16043742 16043952 + 9.43 0.000 intron (NM_033326, intron 12 of 15) LTR16A|LTR|ERVL -74226 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr8-3612 chr8 142993712 142993922 + 9.43 0.000 intron (NR_026913, intron 1 of 1) MER4E|LTR|ERV1 -2011 NR_102426 100128627 NR_102426 CDC42P3 - cell division cycle 42 pseudogene 3 pseudo chr14-3459 chr14 100890800 100891010 + 9.43 0.000 intron (NR_146000, intron 1 of 50) (TTA)n|Simple_repeat|Simple_repeat 1256 NR_146000 79104 Hs.118101 NR_024149 MEG8 Bsr|Irm|LINC00024|NCRNA00024|Rian|SNHG23|SNHG24|lnc-MGC maternally expressed 8, small nucleolar RNA host gene ncRNA chr2-7859 chr2 50464740 50464950 + 9.43 0.000 intron (NM_001330093, intron 17 of 22) intron (NM_001330093, intron 17 of 22) -117089 NM_138735 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr14-2578 chr14 42890802 42891012 + 9.43 0.000 Intergenic THE1D|LTR|ERVL-MaLR 1284051 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr10-8048 chr10 64314582 64314792 + 9.43 0.000 Intergenic Intergenic -510841 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr1-2221 chr1 151070988 151071198 + 9.43 0.000 intron (NM_001323913, intron 1 of 7) CpG 332 NM_001323911 126626 Hs.15671 NM_144618 ENSG00000143458 GABPB2 GABPB-2 GA binding protein transcription factor subunit beta 2 protein-coding chrX-3951 chrX 11212946 11213156 + 9.43 0.000 intron (NM_001287242, intron 2 of 12) intron (NM_001287242, intron 2 of 12) 52941 NM_013423 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr9-8012 chr9 94483217 94483427 + 9.43 0.000 Intergenic LOR1a|LTR|ERV1 -71723 NR_121568 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr5-2678 chr5 38114722 38114932 + 9.43 0.000 intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) -33653 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA chr1-15752 chr1 172270940 172271150 + 9.43 0.000 intron (NR_146559, intron 16 of 20) intron (NR_146559, intron 16 of 20) -126210 NR_103486 100628315 Hs.584880 NR_038397 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA chr5-4669 chr5 37793165 37793375 + 9.43 0.000 Intergenic Intergenic 41552 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr2-7232 chr2 221916093 221916303 + 9.43 0.000 Intergenic LTR33A|LTR|ERVL -341996 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr1-9887 chr1 68178921 68179131 + 9.43 0.000 intron (NM_001193334, intron 1 of 10) intron (NM_001193334, intron 1 of 10) 4584 NR_031664 100302279 NR_031664 ENSG00000221203 MIR1262 MIRN1262|hsa-mir-1262|mir-1262 microRNA 1262 ncRNA chr1-9957 chr1 79463725 79463935 + 9.43 0.000 Intergenic THE1D|LTR|ERVL-MaLR -457100 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr13-1587 chr13 39914028 39914238 + 9.43 0.000 Intergenic L2b|LINE|L2 -249998 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr2-6994 chr2 138613450 138613660 + 9.43 0.000 Intergenic AluSx1|SINE|Alu 111785 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr20-4022 chr20 36623070 36623280 + 9.43 0.000 intron (NM_175077, intron 5 of 7) AluSx|SINE|Alu 17396 NM_199483 55969 Hs.584985 NM_018840 ENSG00000101084 RAB5IF C20orf24|PNAS-11|RIP5 RAB5 interacting factor protein-coding chr6-5439 chr6 157995512 157995722 + 9.43 0.000 intron (NM_003898, intron 1 of 26) intron (NM_003898, intron 1 of 26) -5490 NR_046796 100874300 Hs.742238 NR_046796 ENSG00000233496 SYNJ2-IT1 - SYNJ2 intronic transcript 1 ncRNA chr3-3213 chr3 195153757 195153967 + 9.43 0.000 intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) 5991 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr17-2206 chr17 79026966 79027176 + 9.43 0.000 intron (NR_049769, intron 1 of 3) intron (NR_049769, intron 1 of 3) 584 NR_040018 100507410 Hs.666723 NR_040018 ENSG00000265096 C1QTNF1-AS1 - C1QTNF1 antisense RNA 1 ncRNA chr7-5686 chr7 66848569 66848779 + 9.43 0.000 intron (NR_135738, intron 2 of 6) intron (NR_135738, intron 2 of 6) 1224 NR_135738 101929580 Hs.571342 NR_135738 GTF2IP23 - general transcription factor IIi pseudogene 23 pseudo chr2-12775 chr2 85752795 85753005 + 9.43 0.000 Intergenic MIR|SINE|MIR -1091 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr11-8688 chr11 4725165 4725375 + 9.43 0.000 Intergenic MSTA|LTR|ERVL-MaLR -27417 NM_030774 81285 Hs.501758 NM_030774 ENSG00000167332 OR51E2 HPRAJ|OR51E3P|OR52A2|PSGR olfactory receptor family 51 subfamily E member 2 protein-coding chr9-6675 chr9 135742061 135742271 + 9.43 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 39981 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr7-6238 chr7 132837182 132837392 + 9.43 0.000 intron (NR_133671, intron 7 of 10) intron (NR_133671, intron 7 of 10) 78317 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr11-5253 chr11 29424711 29424921 + 9.43 0.000 Intergenic MSTB|LTR|ERVL-MaLR -169597 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr8-2876 chr8 140557067 140557277 + 9.43 0.000 exon (NM_012154, exon 8 of 19) exon (NM_012154, exon 8 of 19) 45176 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr13-2836 chr13 108342560 108342770 + 9.43 0.000 Intergenic Intergenic 73036 NM_001145645 10673 Hs.525157 NM_006573 ENSG00000102524 TNFSF13B BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4 TNF superfamily member 13b protein-coding chr5-2298 chr5 54720007 54720217 + 9.43 0.000 intron (NR_104658, intron 1 of 2) L2b|LINE|L2 -16788 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr20-2709 chr20 47848189 47848399 + 9.43 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -61678 NM_001161841 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr8-5282 chr8 140188225 140188435 + 9.43 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -87795 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr15-1519 chr15 59292534 59292744 + 9.43 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 80232 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr17-5682 chr17 50729573 50729783 + 9.43 0.000 intron (NM_006107, intron 1 of 10) MER6|DNA|TcMar-Tigger 10075 NM_016424 51747 Hs.130293 NM_006107 ENSG00000108848 LUC7L3 CRA|CREAP-1|CROP|LUC7A|OA48-18|hLuc7A LUC7 like 3 pre-mRNA splicing factor protein-coding chr1-14597 chr1 54067462 54067672 + 9.43 0.000 intron (NR_130900, intron 2 of 4) LTR78|LTR|ERV1 13488 NR_039942 100616315 NR_039942 ENSG00000283749 MIR4781 mir-4781 microRNA 4781 ncRNA chr17-8199 chr17 63382952 63383162 + 9.43 0.000 intron (NM_025185, intron 14 of 25) L1MC2|LINE|L1 57210 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr17-5274 chr17 20294264 20294474 + 9.43 0.000 intron (NM_001033553, intron 12 of 14) intron (NM_001033553, intron 12 of 14) -26805 NR_023380 348254 Hs.462475 NR_023380 CCDC144CP CCDC144C coiled-coil domain containing 144C, pseudogene pseudo chr8-3647 chr8 5140133 5140343 + 9.43 0.000 Intergenic Intergenic -145324 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr10-1775 chr10 68474664 68474874 + 9.43 0.000 Intergenic L1M5|LINE|L1 -2648 NR_102264 1763 Hs.532446 NM_001080449 ENSG00000138346 DNA2 DNA2L|hDNA2 DNA replication helicase/nuclease 2 protein-coding chr18-3281 chr18 52345547 52345757 + 9.43 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 5455 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr11-5004 chr11 75112660 75112870 + 9.43 0.000 Intergenic L1MDa|LINE|L1 -15875 NM_001005285 341152 Hs.554515 NM_001005285 ENSG00000171561 OR2AT4 OR11-265 olfactory receptor family 2 subfamily AT member 4 protein-coding chr16-2939 chr16 3490834 3491044 + 9.43 0.000 Intergenic Intergenic 4550 NM_001080524 646174 Hs.632224 NM_001080524 ENSG00000215131 C16orf90 - chromosome 16 open reading frame 90 protein-coding chr14-3448 chr14 99862310 99862520 + 9.43 0.000 intron (NM_004434, intron 2 of 21) L1MC3|LINE|L1 69002 NM_001008707 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr22-1153 chr22 47090933 47091143 + 9.43 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -174996 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr6-3139 chr6 108831257 108831467 + 9.43 0.000 Intergenic Intergenic -17054 NM_001286609 84071 Hs.645481 NM_032131 ENSG00000118690 ARMC2 SPGF38|bA787I22.1 armadillo repeat containing 2 protein-coding chr7-3616 chr7 34991674 34991884 + 9.43 0.000 intron (NM_015283, intron 6 of 21) intron (NM_015283, intron 6 of 21) 45706 NM_001366673 23333 Hs.408623 NM_015283 ENSG00000173852 DPY19L1 - dpy-19 like C-mannosyltransferase 1 protein-coding chr4-5158 chr4 155129521 155129731 + 9.43 0.000 Intergenic Intergenic -79010 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr5-3664 chr5 157336497 157336707 + 9.43 0.000 intron (NM_001037333, intron 21 of 30) intron (NM_001037333, intron 21 of 30) 9075 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr4-3396 chr4 40120840 40121050 + 9.43 0.000 exon (NM_018177, exon 9 of 18) exon (NM_018177, exon 9 of 18) -63746 NR_027277 344967 Hs.534633 NR_027277 ENSG00000205794 LOC344967 - acyl-CoA thioesterase 7 pseudogene pseudo chrX-1161 chrX 45758270 45758480 + 9.43 0.000 Intergenic Intergenic -11251 NR_029636 407007 NR_029636 ENSG00000207725 MIR222 MIRN222|miRNA222|mir-222 microRNA 222 ncRNA chr15-3390 chr15 88332807 88333017 + 9.43 0.000 Intergenic L2|LINE|L2 -76173 NM_002530 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr1-10588 chr1 175842621 175842831 + 9.43 0.000 Intergenic Intergenic -34617 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr12-3958 chr12 9190183 9190393 + 9.43 0.000 intron (NM_002864, intron 13 of 35) L1PREC2|LINE|L1 18107 NM_002864 5858 Hs.707491 NM_002864 ENSG00000126838 PZP CPAMD6 PZP alpha-2-macroglobulin like protein-coding chr6-3051 chr6 63795017 63795227 + 9.43 0.000 intron (NM_001292009, intron 37 of 43) intron (NM_001292009, intron 37 of 43) -11714 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr1-12410 chr1 10633579 10633789 + 9.43 0.000 Intergenic Intergenic 158734 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr15-3145 chr15 67066251 67066461 + 9.43 0.000 exon (NM_005902, exon 1 of 9) exon (NM_005902, exon 1 of 9) 754 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr14-5087 chr14 86524048 86524258 + 9.43 0.000 Intergenic L1MA10|LINE|L1 -381625 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr13-2632 chr13 78135539 78135749 + 9.43 0.000 intron (NR_047001, intron 1 of 5) intron (NR_047001, intron 1 of 5) 80789 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr10-6148 chr10 133514407 133514617 + 9.43 0.000 Intergenic L1MCc|LINE|L1 -12851 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr14-4156 chr14 76420265 76420475 + 9.43 0.000 intron (NM_004452, intron 3 of 10) intron (NM_004452, intron 3 of 10) 49023 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr15-4183 chr15 98767870 98768080 + 9.43 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) -16451 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chrX-1998 chrX 13593399 13593609 + 9.43 0.000 intron (NM_015507, intron 2 of 11) LTR16A1|LTR|ERVL 3212 NR_106734 102466519 NR_106734 ENSG00000283493 MIR6086 hsa-mir-6086 microRNA 6086 ncRNA chr5-6147 chr5 37835209 37835419 + 9.43 0.000 promoter-TSS (NM_001278098) promoter-TSS (NM_001278098) 177 NM_199231 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr4-7094 chr4 33067368 33067578 + 9.43 0.000 Intergenic Intergenic 716435 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chrX-4964 chrX 113631391 113631601 + 9.43 0.000 intron (NR_131204, intron 1 of 2) intron (NR_131204, intron 1 of 2) 306722 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr19-6667 chr19 34032859 34033069 + 9.43 0.000 Intergenic Intergenic -139540 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr18-1434 chr18 14089887 14090097 + 9.43 0.000 intron (NR_033354, intron 1 of 5) intron (NR_033354, intron 1 of 5) 42443 NM_145287 162655 Hs.352635 NM_145287 ENSG00000175322 ZNF519 HsT2362 zinc finger protein 519 protein-coding chr7-3989 chr7 137993697 137993907 + 9.43 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 8284 NM_194071 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr3-11022 chr3 181529906 181530116 + 9.43 0.000 intron (NR_075091, intron 3 of 7) LTR41B|LTR|ERVL -80323 NR_004053 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr20-1205 chr20 11901211 11901421 + 9.43 0.000 intron (NM_001282550, intron 1 of 4) intron (NM_001282550, intron 1 of 4) 8823 NM_001282550 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr4-6238 chr4 64925062 64925272 + 9.43 0.000 intron (NR_033976, intron 6 of 6) L1PA13|LINE|L1 79333 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr11-3765 chr11 47389753 47389963 + 9.43 0.000 Intergenic Intergenic -11112 NR_039707 100616222 NR_039707 ENSG00000264583 MIR4487 mir-4487 microRNA 4487 ncRNA chr2-14239 chr2 211663972 211664182 + 9.43 0.000 intron (NM_001042599, intron 15 of 26) intron (NM_001042599, intron 15 of 26) 762283 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr8-4757 chr8 143215022 143215232 + 9.43 0.000 intron (NM_178172, intron 3 of 3) intron (NM_178172, intron 3 of 3) 1909 NM_001301772 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr6-4126 chr6 158931463 158931673 + 9.43 0.000 Intergenic AluSq2|SINE|Alu 43091 NR_160979 100130967 Hs.32804 NM_001195032 C6orf99 - chromosome 6 open reading frame 99 ncRNA chrX-4431 chrX 54393994 54394204 + 9.43 0.000 Intergenic AluSx|SINE|Alu -36053 NM_001002838 65267 Hs.92423 NM_020922 ENSG00000196632 WNK3 PRKWNK3 WNK lysine deficient protein kinase 3 protein-coding chr1-7855 chr1 89068349 89068559 + 9.43 0.000 Intergenic LTR8|LTR|ERV1 -3246 NM_002053 2633 Hs.62661 NM_002053 ENSG00000117228 GBP1 - guanylate binding protein 1 protein-coding chr16-4767 chr16 85252414 85252624 + 9.43 0.000 Intergenic Intergenic -30439 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr14-3045 chr14 59438837 59439047 + 9.43 0.000 Intergenic L1MB7|LINE|L1 26438 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding chr18-1929 chr18 34517194 34517404 + 9.43 0.000 intron (NM_001198945, intron 1 of 10) L1MD2|LINE|L1 23987 NM_032979 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr18-2466 chr18 42084722 42084932 + 9.43 0.000 3' UTR (NM_002647, exon 25 of 25) 3' UTR (NM_002647, exon 25 of 25) -101841 NR_046174 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr5-6852 chr5 117478245 117478455 + 9.43 0.000 intron (NR_046089, intron 3 of 5) Tigger1|DNA|TcMar-Tigger 62838 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr13-2330 chr13 33391324 33391534 + 9.43 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -56163 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr10-3303 chr10 955070 955280 + 9.43 0.000 Intergenic Intergenic 22149 NR_120629 101927762 Hs.151159 NR_120629 ENSG00000229869 LOC101927762 - uncharacterized LOC101927762 ncRNA GL383555.2-1 GL383555.2 196240 196450 + 9.43 0.000 NA NA NA NA chr3-7801 chr3 88790552 88790762 + 9.43 0.000 Intergenic L1MA2|LINE|L1 -316964 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr3-6019 chr3 49199813 49200023 + 9.43 0.000 intron (NM_001135197, intron 1 of 7) intron (NM_001135197, intron 1 of 7) 420 NM_001135197 339834 Hs.631931 NM_178173 ENSG00000173421 CCDC36 CT74 coiled-coil domain containing 36 protein-coding chr5-6025 chr5 157671208 157671418 + 9.43 0.000 promoter-TSS (NM_001145132) promoter-TSS (NM_001145132) 167 NM_001308165 11063 Hs.529462 NM_007017 ENSG00000039600 SOX30 - SRY-box transcription factor 30 protein-coding chrX-690 chrX 41922759 41922969 + 9.43 0.000 intron (NM_003688, intron 1 of 26) CpG 170 NM_003688 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr9-7936 chr9 90218350 90218560 + 9.43 0.000 Intergenic SATR2|Satellite|Satellite -176956 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr2-8564 chr2 135066489 135066699 + 9.43 0.000 intron (NM_001172435, intron 3 of 24) MIRb|SINE|MIR 14302 NM_012233 22930 Hs.306327 NM_012233 ENSG00000115839 RAB3GAP1 P130|RAB3GAP|RAB3GAP130|WARBM1 RAB3 GTPase activating protein catalytic subunit 1 protein-coding chr11-5332 chr11 61519414 61519624 + 9.43 0.000 intron (NM_001300773, intron 9 of 9) L1MD3|LINE|L1 10770 NM_001145077 390205 Hs.441122 NM_001145077 ENSG00000204950 LRRC10B - leucine rich repeat containing 10B protein-coding chr10-2615 chr10 79248952 79249162 + 9.43 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -98412 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr2-4885 chr2 120387984 120388194 + 9.43 0.000 Intergenic Intergenic 41953 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr2-4247 chr2 220162428 220162638 + 9.43 0.000 Intergenic Intergenic -255968 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr6-4740 chr6 68778838 68779048 + 9.43 0.000 intron (NM_001704, intron 3 of 31) intron (NM_001704, intron 3 of 31) 143661 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr15-2311 chr15 75725277 75725487 + 9.43 0.000 intron (NM_175881, intron 2 of 3) intron (NM_175881, intron 2 of 3) 1341 NM_175881 161753 Hs.144348 NM_175881 ENSG00000182950 ODF3L1 - outer dense fiber of sperm tails 3 like 1 protein-coding chr9-8126 chr9 100403986 100404196 + 9.43 0.000 Intergenic Intergenic -23122 NM_001198807 91283 Hs.530272 NM_080655 ENSG00000066697 MSANTD3 C9orf30|L8 Myb/SANT DNA binding domain containing 3 protein-coding chr2-7047 chr2 159187080 159187290 + 9.43 0.000 TTS (NR_106948) TTS (NR_106948) 350 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr17-5647 chr17 49967535 49967745 + 9.43 0.000 Intergenic AluJo|SINE|Alu -1550 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr2-3468 chr2 158025485 158025695 + 9.43 0.000 intron (NM_001135098, intron 2 of 8) intron (NM_001135098, intron 2 of 8) 30411 NM_001135098 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr7-5394 chr7 32981663 32981873 + 9.43 0.000 intron (NM_007270, intron 5 of 9) AluSx1|SINE|Alu 2294 NM_001284343 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr1-8046 chr1 241990147 241990357 + 9.43 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 8846 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr16-2049 chr16 67014275 67014485 + 9.43 0.000 Intergenic CpG 13841 NM_001190201 283848 Hs.346947 NM_173815 ENSG00000172824 CES4A CES6|CES8 carboxylesterase 4A protein-coding chr3-3670 chr3 141929578 141929788 + 9.43 0.000 Intergenic Intergenic 53040 NM_001679 483 Hs.477789 NM_001679 ENSG00000069849 ATP1B3 ATPB-3|CD298 ATPase Na+/K+ transporting subunit beta 3 protein-coding chr3-9249 chr3 38907052 38907262 + 9.43 0.000 intron (NM_014139, intron 10 of 25) LTR16C|LTR|ERVL 43404 NM_014139 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr9-4281 chr9 110592002 110592212 + 9.43 0.000 Intergenic LTR8|LTR|ERV1 -12366 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr1-9439 chr1 34290715 34290925 + 9.43 0.000 Intergenic L2c|LINE|L2 113913 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr11-6220 chr11 46733426 46733636 + 9.43 0.000 intron (NM_000506, intron 12 of 13) L1MC4|LINE|L1 14318 NM_001311257 2147 Hs.655207 NM_000506 ENSG00000180210 F2 PT|RPRGL2|THPH1 coagulation factor II, thrombin protein-coding chr13-1680 chr13 76647708 76647918 + 9.43 0.000 Intergenic Intergenic 238592 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr15-2129 chr15 72862824 72863034 + 9.43 0.000 Intergenic THE1B|LTR|ERVL-MaLR -79171 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr1-13191 chr1 207110190 207110400 + 9.43 0.000 intron (NM_000715, intron 1 of 11) intron (NM_000715, intron 1 of 11) 6062 NM_000715 722 Hs.1012 NM_000715 ENSG00000123838 C4BPA C4BP|PRP complement component 4 binding protein alpha protein-coding chrX-4552 chrX 69179461 69179671 + 9.43 0.000 promoter-TSS (NR_103715) promoter-TSS (NR_103715) 9 NR_103715 100996279 NR_103715 ENSG00000215162 LINC00269 CXorf62|NCRNA00269 long intergenic non-protein coding RNA 269 ncRNA chr18-2004 chr18 42005679 42005889 + 9.43 0.000 intron (NM_001308020, intron 9 of 23) intron (NM_001308020, intron 9 of 23) 50550 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr8-3838 chr8 30565216 30565426 + 9.43 0.000 intron (NM_006867, intron 8 of 9) intron (NM_006867, intron 8 of 9) -73259 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr14-1786 chr14 103908111 103908321 + 9.43 0.000 Intergenic Intergenic 13313 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr15-4257 chr15 34359752 34359962 + 9.43 0.000 intron (NM_153613, intron 12 of 13) intron (NM_153613, intron 12 of 13) 7339 NM_153613 254531 Hs.352614 NM_153613 ENSG00000176454 LPCAT4 AGPAT7|AYTL3|LPAAT-eta|LPEAT2 lysophosphatidylcholine acyltransferase 4 protein-coding chr18-3036 chr18 27517260 27517470 + 9.43 0.000 Intergenic LTR39|LTR|ERV1 -174709 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr4-4555 chr4 73341470 73341680 + 9.43 0.000 Intergenic Intergenic -62712 NM_000477 213 Hs.418167 NM_000477 ENSG00000163631 ALB HSA|PRO0883|PRO0903|PRO1341 albumin protein-coding KI270757.1-2 KI270757.1 16475 16685 + 9.43 0.000 NA NA NA NA chr3-4060 chr3 79448913 79449123 + 9.43 0.000 intron (NM_002941, intron 2 of 30) AluJr|SINE|Alu 37291 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr17-3812 chr17 41732734 41732944 + 9.43 0.000 intron (NM_001367460, intron 1 of 11) intron (NM_001367460, intron 1 of 11) 1804 NM_001367460 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding chr10-7444 chr10 6920063 6920273 + 9.43 0.000 Intergenic Intergenic 140570 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr8-7374 chr8 138257000 138257210 + 9.43 0.000 intron (NM_015912, intron 4 of 19) intron (NM_015912, intron 4 of 19) -173560 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chr13-2299 chr13 31508779 31508989 + 9.43 0.000 Intergenic MER115|DNA|hAT-Tip100 -230642 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr17-8070 chr17 52187382 52187592 + 9.43 0.000 Intergenic MLT1K-int|LTR|ERVL-MaLR -27470 NM_001082534 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr6-7636 chr6 79998971 79999181 + 9.43 0.000 Intergenic L1MEc|LINE|L1 -5529 NM_001166691 7272 Hs.169840 NM_003318 ENSG00000112742 TTK CT96|ESK|MPH1|MPS1|MPS1L1|PYT TTK protein kinase protein-coding chr1-5806 chr1 202845372 202845582 + 9.43 0.000 Intergenic Intergenic -16277 NR_002929 148709 Hs.162880 NR_002929 ENSG00000234996 LOC148709 - actin gamma 1 pseudogene pseudo chr2-5961 chr2 44856649 44856859 + 9.43 0.000 Intergenic AluSc8|SINE|Alu 82134 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr11-6466 chr11 67271583 67271793 + 9.43 0.000 intron (NM_001619, intron 1 of 20) intron (NM_001619, intron 1 of 20) 5215 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr3-5300 chr3 125212770 125212980 + 9.43 0.000 promoter-TSS (NM_024628) promoter-TSS (NM_024628) -110 NM_024628 84561 Hs.658514 NM_024628 ENSG00000221955 SLC12A8 CCC9 solute carrier family 12 member 8 protein-coding chrX-4109 chrX 24639036 24639246 + 9.43 0.000 intron (NM_001163264, intron 1 of 7) intron (NM_001163264, intron 1 of 7) 8206 NM_001163265 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr16-2148 chr16 47287174 47287384 + 9.43 0.000 intron (NM_030790, intron 10 of 17) FLAM_C|SINE|Alu 143211 NR_110903 101927102 Hs.634652 NR_110903 ITFG1-AS1 - ITFG1 antisense RNA 1 ncRNA chr1-4974 chr1 55275921 55276131 + 9.43 0.000 Intergenic Intergenic 50385 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr9-3158 chr9 112487067 112487277 + 9.43 0.000 5' UTR (NM_001350649, exon 1 of 5) 5' UTR (NM_001350649, exon 1 of 5) 204 NM_001287036 158405 Hs.656619 NM_133465 ENSG00000165185 KIAA1958 - KIAA1958 protein-coding chr6-3816 chr6 34792884 34793094 + 9.43 0.000 intron (NM_017754, intron 1 of 20) intron (NM_017754, intron 1 of 20) 906 NM_017754 54887 Hs.700656 NM_017754 ENSG00000065060 UHRF1BP1 C6orf107|ICBP90|dJ349A12.1 UHRF1 binding protein 1 protein-coding chr1-8398 chr1 79901825 79902035 + 9.43 0.000 Intergenic Intergenic -633825 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr12-5892 chr12 55784602 55784812 + 9.43 0.000 intron (NM_033082, intron 9 of 10) MER3|DNA|hAT-Charlie 33017 NM_033082 84324 Hs.505676 NM_033082 ENSG00000205323 SARNP CIP29|HCC1|HSPC316|THO1 SAP domain containing ribonucleoprotein protein-coding chr14-3621 chr14 60418501 60418711 + 9.43 0.000 Intergenic AluJr4|SINE|Alu 67457 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding chr7-6868 chr7 50325615 50325825 + 9.43 0.000 intron (NM_001220771, intron 1 of 3) AluY|SINE|Alu 6672 NM_001291842 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr4-2103 chr4 52037702 52037912 + 9.43 0.000 intron (NM_000232, intron 1 of 5) intron (NM_000232, intron 1 of 5) 512 NM_000232 6443 Hs.438953 NM_000232 ENSG00000163069 SGCB A3b|LGMD2E|LGMDR4|SGC sarcoglycan beta protein-coding chr11-6849 chr11 97992986 97993196 + 9.43 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -1027858 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr10-6579 chr10 79374569 79374779 + 9.43 0.000 Intergenic Intergenic 27205 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr14-1648 chr14 105445320 105445530 + 9.43 0.000 exon (NM_004689, exon 3 of 21) exon (NM_004689, exon 3 of 21) 25598 NM_001203258 9112 Hs.525629 NM_004689 ENSG00000182979 MTA1 - metastasis associated 1 protein-coding chrX-4138 chrX 28001971 28002181 + 9.43 0.000 Intergenic L1PA15|LINE|L1 -20627 NM_001017930 139425 Hs.447365 NM_001017930 ENSG00000226372 DCAF8L1 WDR42B DDB1 and CUL4 associated factor 8 like 1 protein-coding chr4-2567 chr4 93552461 93552671 + 9.43 0.000 intron (NM_001286838, intron 12 of 14) L1PA4|LINE|L1 -276187 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr2-3283 chr2 37689085 37689295 + 9.43 0.000 Intergenic Intergenic -16655 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr18-2167 chr18 58353015 58353225 + 9.43 0.000 intron (NM_001144965, intron 18 of 30) intron (NM_001144965, intron 18 of 30) -97954 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr2-6102 chr2 199449420 199449630 + 9.43 0.000 intron (NM_001172509, intron 2 of 10) intron (NM_001172509, intron 2 of 10) 8414 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr1-3418 chr1 1025288 1025498 + 9.43 0.000 intron (NM_198576, intron 2 of 35) intron (NM_198576, intron 2 of 35) 5273 NM_001305275 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr7-5764 chr7 75705129 75705339 + 9.43 0.000 intron (NM_005338, intron 1 of 30) L1MB3|LINE|L1 33707 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr14-3565 chr14 105307228 105307438 + 9.43 0.000 intron (NM_001243127, intron 1 of 23) MER74A|LTR|ERVL -6332 NM_001242790 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr17-5333 chr17 28554606 28554816 + 9.43 0.000 intron (NM_033198, intron 11 of 11) intron (NM_033198, intron 11 of 11) -2083 NM_005148 9094 Hs.410455 NM_005148 ENSG00000109103 UNC119 HRG4|IMD13|POC7|POC7A unc-119 lipid binding chaperone protein-coding chr1-5666 chr1 36106217 36106427 + 9.43 0.000 intron (NM_005202, intron 2 of 3) MIR|SINE|MIR 17430 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr20-2726 chr20 49235015 49235225 + 9.43 0.000 intron (NM_017895, intron 12 of 20) intron (NM_017895, intron 12 of 20) 15825 NM_017895 55661 Hs.65234 NM_017895 ENSG00000124228 DDX27 DRS1|Drs1p|HSPC259|PP3241|RHLP|dJ686N3.1 DEAD-box helicase 27 protein-coding chr5-5419 chr5 136452371 136452581 + 9.43 0.000 Intergenic L2a|LINE|L2 -87000 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chrX-992 chrX 14253163 14253373 + 9.43 0.000 Intergenic Intergenic 9003 NR_110506 286480 Hs.567831 NR_110506 UBE2E4P UbcM2 ubiquitin conjugating enzyme E2 E4 pseudogene pseudo chr13-2562 chr13 66525120 66525330 + 9.43 0.000 intron (NM_001318373, intron 3 of 3) L2|LINE|L2 -299944 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr6-4854 chr6 86757955 86758165 + 9.43 0.000 Intergenic Intergenic -179468 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr4-4262 chr4 21012790 21013000 + 9.43 0.000 intron (NM_147182, intron 2 of 8) UCON132b|DNA|hAT-Tip100 -28886 NM_001363504 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr18-3251 chr18 49526720 49526930 + 9.43 0.000 Intergenic AluJo|SINE|Alu -34361 NM_001199342 6139 Hs.293653 NM_000985 ENSG00000265681 RPL17 L17|PD-1|RPL23 ribosomal protein L17 protein-coding chrX-2467 chrX 84012858 84013068 + 9.43 0.000 Intergenic L1PA6|LINE|L1 151817 NM_021118 1538 Hs.444230 NM_021118 ENSG00000183035 CYLC1 CYCL1 cylicin 1 protein-coding chr9-4946 chr9 15382633 15382843 + 9.43 0.000 Intergenic MLT2C2|LTR|ERVL -40046 NM_001039697 6619 Hs.546299 NM_003084 ENSG00000164975 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex polypeptide 3 protein-coding chr1-4604 chr1 151172433 151172643 + 9.43 0.000 intron (NM_013353, intron 4 of 9) intron (NM_013353, intron 4 of 9) 3443 NM_013353 29765 Hs.709681 NM_013353 ENSG00000163157 TMOD4 SK-TMOD tropomodulin 4 protein-coding chr20-2827 chr20 59500949 59501159 + 9.43 0.000 Intergenic Intergenic -76455 NM_001199505 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr11-6893 chr11 104314885 104315095 + 9.43 0.000 Intergenic Intergenic -150843 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr2-14233 chr2 211252611 211252821 + 9.43 0.000 Intergenic Intergenic 635145 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr3-2205 chr3 17233394 17233604 + 9.43 0.000 intron (NM_014744, intron 17 of 21) intron (NM_014744, intron 17 of 21) 300303 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr2-9714 chr2 59461382 59461592 + 9.43 0.000 Intergenic Intergenic 243779 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr15-2684 chr15 79524543 79524753 + 9.43 0.000 Intergenic Intergenic 92132 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr21-1092 chr21 33707032 33707242 + 9.43 0.000 intron (NM_001001132, intron 1 of 29) intron (NM_001001132, intron 1 of 29) 64636 NM_001331010 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr17-4967 chr17 79657020 79657230 + 9.43 0.000 Intergenic Intergenic -46074 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr15-2288 chr15 62462484 62462694 + 9.43 0.000 Intergenic Intergenic 119560 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr7-2645 chr7 2498854 2499064 + 9.43 0.000 Intergenic Intergenic -13570 NM_001166355 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr9-2796 chr9 117919560 117919770 + 9.43 0.000 Intergenic Intergenic 215262 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr3-5395 chr3 156959792 156960002 + 9.43 0.000 intron (NM_001004316, intron 6 of 12) intron (NM_001004316, intron 6 of 12) -121944 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA chr1-9797 chr1 58051001 58051211 + 9.43 0.000 intron (NM_001353980, intron 1 of 5) L1PA6|LINE|L1 190525 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr3-4184 chr3 127790829 127791039 + 9.43 0.000 intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 31948 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr11-5754 chr11 3207833 3208043 + 9.43 0.000 Intergenic Intergenic -10394 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr7-6237 chr7 132655522 132655732 + 9.43 0.000 intron (NR_046323, intron 1 of 4) intron (NR_046323, intron 1 of 4) 6833 NR_046323 286023 Hs.671875 NM_173682 ENSG00000183470 FLJ40288 - uncharacterized FLJ40288 ncRNA chr12-2589 chr12 117458952 117459162 + 9.43 0.000 3' UTR (NM_173598, exon 20 of 20) 3' UTR (NM_173598, exon 20 of 20) -97255 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr3-4904 chr3 186271007 186271217 + 9.43 0.000 intron (NM_001346, intron 11 of 24) intron (NM_001346, intron 11 of 24) 91122 NM_001346 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr8-2463 chr8 130290328 130290538 + 9.43 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 6100 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr15-3289 chr15 77784482 77784692 + 9.43 0.000 intron (NM_001301186, intron 2 of 5) intron (NM_001301186, intron 2 of 5) 2462 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr4-7868 chr4 103749104 103749314 + 9.43 0.000 Intergenic LOR1-int|LTR|ERV1 -29224 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr5-5336 chr5 130412728 130412938 + 9.43 0.000 Intergenic Intergenic 508368 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr16-1895 chr16 87668520 87668730 + 9.43 0.000 intron (NM_020655, intron 2 of 4) intron (NM_020655, intron 2 of 4) 66117 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr7-3304 chr7 44822761 44822971 + 9.43 0.000 Intergenic Intergenic 25260 NM_201436 94239 Hs.488189 NM_012412 ENSG00000105968 H2AFV H2A.Z-2|H2AV H2A histone family member V protein-coding chr20-1852 chr20 22342222 22342432 + 9.43 0.000 Intergenic Intergenic -59526 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chr3-6257 chr3 69356625 69356835 + 9.43 0.000 intron (NM_015123, intron 1 of 22) intron (NM_015123, intron 1 of 22) 29358 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr17-2981 chr17 67031262 67031472 + 9.43 0.000 3' UTR (NM_014405, exon 4 of 4) 3' UTR (NM_014405, exon 4 of 4) -13187 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr12-4256 chr12 115066331 115066541 + 9.43 0.000 Intergenic Intergenic -382261 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr17-7578 chr17 20677199 20677409 + 9.43 0.000 Intergenic FLAM_C|SINE|Alu -35142 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr1-10303 chr1 150778614 150778824 + 9.43 0.000 Intergenic MIR|SINE|MIR -12941 NM_004079 1520 Hs.181301 NM_004079 ENSG00000163131 CTSS - cathepsin S protein-coding chr12-4579 chr12 30953496 30953706 + 9.43 0.000 intron (NM_001370301, intron 1 of 6) intron (NM_001370301, intron 1 of 6) 26697 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr15-1952 chr15 33852465 33852675 + 9.43 0.000 intron (NM_001243996, intron 93 of 102) intron (NM_001243996, intron 93 of 102) -115927 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr7-4975 chr7 151169772 151169982 + 9.43 0.000 Intergenic Intergenic -2329 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr11-3153 chr11 58771437 58771647 + 9.43 0.000 Intergenic HERV1_I-int|LTR|ERV1 -39568 NM_005838 10249 Hs.145384 NM_005838 ENSG00000149124 GLYAT ACGNAT|CAT|GAT glycine-N-acyltransferase protein-coding chr11-5916 chr11 14162741 14162951 + 9.43 0.000 intron (NM_006108, intron 6 of 15) Tigger13a|DNA|TcMar-Tigger 195639 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr19-5664 chr19 7720387 7720597 + 9.43 0.000 Intergenic AluJo|SINE|Alu 11679 NM_001244856 339390 Hs.220649 NM_198492 ENSG00000182566 CLEC4G DTTR431|LP2698|LSECtin|UNQ431 C-type lectin domain family 4 member G protein-coding chr11-5254 chr11 29512187 29512397 + 9.43 0.000 Intergenic LTR8|LTR|ERV1 -82121 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr3-7421 chr3 114455113 114455323 + 9.43 0.000 intron (NR_121661, intron 1 of 2) intron (NR_121661, intron 1 of 2) 1625 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr12-4441 chr12 10501120 10501330 + 9.43 0.000 Intergenic L1MC4|LINE|L1 -4668 NM_001357734 255308 Hs.547382 NM_001357731 ENSG00000180574 EIF2S3B EIF2S3L|eIF-2gA|eIF2gA eukaryotic translation initiation factor 2 subunit gamma B protein-coding chr7-8455 chr7 48032319 48032529 + 9.43 0.000 Intergenic L1MA9|LINE|L1 -3087 NM_001267865 136288 Hs.258357 NM_001100159 ENSG00000164746 C7orf57 - chromosome 7 open reading frame 57 protein-coding chr6-2569 chr6 44696021 44696231 + 9.43 0.000 Intergenic Intergenic -144245 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr3-4340 chr3 179768125 179768335 + 9.43 0.000 intron (NM_003940, intron 19 of 20) intron (NM_003940, intron 19 of 20) 115190 NM_003940 8975 Hs.175322 NM_003940 ENSG00000058056 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 protein-coding chr5-7155 chr5 3146058 3146268 + 9.43 0.000 Intergenic L1MD1|LINE|L1 -31672 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr11-7091 chr11 122299128 122299338 + 9.43 0.000 intron (NR_137179, intron 1 of 4) MSTB-int|LTR|ERVL-MaLR 10254 NR_137180 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr16-3899 chr16 76964402 76964612 + 9.43 0.000 Intergenic Intergenic 95571 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr3-4149 chr3 123373146 123373356 + 9.43 0.000 intron (NM_183357, intron 1 of 20) intron (NM_183357, intron 1 of 20) 43091 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr14-4157 chr14 76423909 76424119 + 9.43 0.000 intron (NM_004452, intron 3 of 10) L2a|LINE|L2 52667 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr21-609 chr21 28160529 28160739 + 9.43 0.000 intron (NR_126012, intron 5 of 5) MLT1F1|LTR|ERVL-MaLR 68033 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr3-3288 chr3 129272529 129272739 + 9.43 0.000 TTS (NR_106884) TTS (NR_106884) 488 NR_106884 102465496 NR_106884 ENSG00000278658 MIR6826 hsa-mir-6826 microRNA 6826 ncRNA chr2-4940 chr2 173390309 173390519 + 9.43 0.000 Intergenic Intergenic 35542 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr8-4057 chr8 63169930 63170140 + 9.43 0.000 intron (NM_001277816, intron 2 of 3) intron (NM_001277816, intron 2 of 3) 1032 NM_001277818 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 - YTH N6-methyladenosine RNA binding protein 3 protein-coding chr1-7702 chr1 24255246 24255456 + 9.43 0.000 Intergenic Intergenic 55111 NR_027087 284632 Hs.638906 NR_027087 ENSG00000230023 LINC02800 - long intergenic non-protein coding RNA 2800 ncRNA chr1-12401 chr1 9705645 9705855 + 9.43 0.000 intron (NM_005026, intron 2 of 23) L1ME3Cz|LINE|L1 14283 NM_001350235 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr16-4269 chr16 24217735 24217945 + 9.43 0.000 3' UTR (NM_002738, exon 17 of 17) 3' UTR (NM_002738, exon 17 of 17) 14724 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr19-2124 chr19 2019700 2019910 + 9.43 0.000 Intergenic Intergenic -4091 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr16-3579 chr16 68384671 68384881 + 9.43 0.000 intron (NM_018667, intron 2 of 8) intron (NM_018667, intron 2 of 8) 63732 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr9-6519 chr9 108237062 108237272 + 9.43 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 618819 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr14-4205 chr14 91908444 91908654 + 9.43 0.000 intron (NM_006329, intron 4 of 10) intron (NM_006329, intron 4 of 10) 39153 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr5-8337 chr5 118617867 118618077 + 9.43 0.000 intron (NR_104998, intron 4 of 4) intron (NR_104998, intron 4 of 4) 21784 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chr4-5176 chr4 157874550 157874760 + 9.43 0.000 Intergenic L2b|LINE|L2 -296097 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr8-5508 chr8 60046389 60046599 + 9.43 0.000 Intergenic Intergenic 234906 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr9-8680 chr9 130511633 130511843 + 9.43 0.000 Intergenic L2a|LINE|L2 66777 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr9-4462 chr9 27217372 27217582 + 9.43 0.000 intron (NM_001290077, intron 17 of 21) intron (NM_001290077, intron 17 of 21) 65316 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA chr5-4732 chr5 43985503 43985713 + 9.43 0.000 Intergenic MER41E|LTR|ERV1 -382378 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr17-1865 chr17 32487097 32487307 + 9.43 0.000 intron (NM_003885, intron 1 of 1) CpG 209 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr7-9191 chr7 115984197 115984407 + 9.43 0.000 exon (NM_001018058, exon 2 of 7) exon (NM_001018058, exon 2 of 7) -15989 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr6-5384 chr6 152152135 152152345 + 9.43 0.000 intron (NM_182961, intron 133 of 145) intron (NM_182961, intron 133 of 145) 16047 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr9-5034 chr9 28719260 28719470 + 9.43 0.000 promoter-TSS (NM_152570) promoter-TSS (NM_152570) -60 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr2-6662 chr2 10146728 10146938 + 9.43 0.000 intron (NR_161344, intron 3 of 3) intron (NR_161344, intron 3 of 3) 5451 NR_161344 348738 Hs.454981 NR_161344 ENSG00000171848 C2orf48 - chromosome 2 open reading frame 48 ncRNA chr2-4005 chr2 96176052 96176262 + 9.43 0.000 Intergenic Intergenic -30717 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr2-5123 chr2 20962943 20963153 + 9.43 0.000 Intergenic MIR3|SINE|MIR 81025 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr2-5755 chr2 219611857 219612067 + 9.43 0.000 exon (NM_052902, exon 19 of 25) exon (NM_052902, exon 19 of 25) 14105 NM_052902 114790 Hs.22410 NM_052902 ENSG00000144589 STK11IP LIP1|LKB1IP|STK11IP1 serine/threonine kinase 11 interacting protein protein-coding chr15-3928 chr15 38035634 38035844 + 9.43 0.000 Intergenic LTR16E1|LTR|ERVL -4654 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LINC02345 - long intergenic non-protein coding RNA 2345 ncRNA chr4-2891 chr4 78885884 78886094 + 9.43 0.000 intron (NM_198892, intron 14 of 15) AluJr4|SINE|Alu 53449 NM_001040202 152559 Hs.657312 NM_177453 ENSG00000163291 PAQR3 RKTG progestin and adipoQ receptor family member 3 protein-coding chr1-4295 chr1 21238427 21238637 + 9.43 0.000 intron (NM_001113347, intron 8 of 16) MIRb|SINE|MIR 41083 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chrX-1705 chrX 17526037 17526247 + 9.43 0.000 intron (NM_198270, intron 1 of 7) MER103C|DNA|hAT-Charlie -2293 NR_135631 101928389 Hs.686933 NR_135631 ENSG00000235834 LOC101928389 - uncharacterized LOC101928389 ncRNA chr8-4035 chr8 60653772 60653982 + 9.43 0.000 Intergenic L2|LINE|L2 -24863 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr19-3491 chr19 38577905 38578115 + 9.43 0.000 exon (NM_000540, exon 98 of 106) exon (NM_000540, exon 98 of 106) -18337 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr11-7499 chr11 3218122 3218332 + 9.43 0.000 promoter-TSS (NR_027138) promoter-TSS (NR_027138) -105 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr6-5147 chr6 124869461 124869671 + 9.43 0.000 Intergenic L1MC1|LINE|L1 -92979 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr4-7786 chr4 96451104 96451314 + 9.43 0.000 intron (NR_147149, intron 1 of 3) L1PA14|LINE|L1 140506 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chrX-1505 chrX 9231619 9231829 + 9.43 0.000 Intergenic Intergenic -197597 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding chr16-6875 chr16 84151334 84151544 + 9.43 0.000 intron (NM_178452, intron 3 of 11) intron (NM_178452, intron 3 of 11) 6131 NM_178452 123872 Hs.310164 NM_178452 ENSG00000154099 DNAAF1 CILD13|LRRC50|ODA7|swt dynein axonemal assembly factor 1 protein-coding chr1-16510 chr1 230196007 230196217 + 9.43 0.000 intron (NM_004481, intron 2 of 15) intron (NM_004481, intron 2 of 15) 128874 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr20-1838 chr20 4012773 4012983 + 9.43 0.000 intron (NM_001134338, intron 1 of 6) intron (NM_001134338, intron 1 of 6) 2680 NM_001134338 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr15-3122 chr15 65540620 65540830 + 9.43 0.000 intron (NM_016395, intron 1 of 10) L2a|LINE|L2 10262 NM_016395 51495 Hs.512973 NM_016395 ENSG00000074696 HACD3 B-IND1|BIND1|HSPC121|PTPLAD1 3-hydroxyacyl-CoA dehydratase 3 protein-coding chr1-7375 chr1 23951408 23951618 + 9.43 0.000 Intergenic Intergenic -8315 NM_017761 55629 Hs.7862 NM_017761 ENSG00000189266 PNRC2 - proline rich nuclear receptor coactivator 2 protein-coding chr10-4168 chr10 92480173 92480383 + 9.43 0.000 intron (NM_001322796, intron 14 of 24) L2a|LINE|L2 17483 NM_001165946 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr8-2621 chr8 61974062 61974272 + 9.43 0.000 Intergenic Intergenic 84328 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr8-7377 chr8 138432195 138432405 + 9.43 0.000 intron (NM_001362965, intron 1 of 19) L2a|LINE|L2 64961 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr5-4084 chr5 62938253 62938463 + 9.43 0.000 Intergenic LTR16C|LTR|ERVL 359539 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr7-2735 chr7 43024834 43025044 + 9.43 0.000 Intergenic Intergenic -87708 NM_015052 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr12-6802 chr12 10799590 10799800 + 9.43 0.000 Intergenic Intergenic 2932 NM_023919 50837 Hs.533754 NM_023919 ENSG00000121377 TAS2R7 T2R7|TRB4 taste 2 receptor member 7 protein-coding chr11-7114 chr11 123558518 123558728 + 9.43 0.000 intron (NM_020716, intron 1 of 19) MIRc|SINE|MIR -1639 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr11-3080 chr11 18567926 18568136 + 9.43 0.000 intron (NM_001261384, intron 2 of 9) AluJr|SINE|Alu 11487 NM_001261385 55293 Hs.407991 NM_018314 ENSG00000151116 UEVLD ATTP|UEV3 UEV and lactate/malate dehyrogenase domains protein-coding chr16-6397 chr16 54115662 54115872 + 9.43 0.000 3' UTR (NM_001080432, exon 9 of 9) 3' UTR (NM_001080432, exon 9 of 9) 76374 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr21-1021 chr21 20835234 20835444 + 9.43 0.000 Intergenic Intergenic -32231 NR_024090 387486 Hs.576551 NR_024090 ENSG00000224924 LINC00320 C21orf131|NCRNA00320|PRED14 long intergenic non-protein coding RNA 320 ncRNA chr1-10626 chr1 179804590 179804800 + 9.43 0.000 TTS (NR_162130) TTS (NR_162130) 771 NR_162130 113219451 NR_162130 MIR12116 - microRNA 12116 ncRNA chr10-2155 chr10 93610480 93610690 + 9.43 0.000 Intergenic Intergenic -1952 NM_006204 5146 Hs.658121 NM_006204 ENSG00000095464 PDE6C ACHM5|COD4|PDEA2 phosphodiesterase 6C protein-coding chr3-2922 chr3 52649751 52649961 + 9.43 0.000 intron (NM_001366074, intron 9 of 30) intron (NM_001366074, intron 9 of 30) 35743 NM_001350074 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding chr19-3694 chr19 19231975 19232185 + 9.43 0.000 intron (NM_004386, intron 8 of 14) intron (NM_004386, intron 8 of 14) 20122 NM_004386 1463 Hs.169047 NM_004386 ENSG00000130287 NCAN CSPG3 neurocan protein-coding chr17-3980 chr17 65684536 65684746 + 9.43 0.000 intron (NM_001353129, intron 24 of 26) intron (NM_001353129, intron 24 of 26) -122993 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr6-6510 chr6 120873735 120873945 + 9.43 0.000 Intergenic LTR2752|LTR|ERV1 460640 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr15-1066 chr15 84658255 84658465 + 9.43 0.000 promoter-TSS (NM_205858) promoter-TSS (NM_205858) -161 NM_021077 4828 Hs.386470 NM_021077 ENSG00000197696 NMB - neuromedin B protein-coding chr6-5227 chr6 134853856 134854066 + 9.43 0.000 Intergenic Intergenic 96140 NM_170771 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding chr21-1141 chr21 39291539 39291749 + 9.43 0.000 intron (NM_018963, intron 8 of 41) LTR35B|LTR|ERV1 21988 NM_018963 54014 Hs.627139 NM_018963 ENSG00000185658 BRWD1 C21orf107|DCAF19|N143|WDR9|WRD9 bromodomain and WD repeat domain containing 1 protein-coding chr22-2967 chr22 50102755 50102965 + 9.43 0.000 intron (NM_018995, intron 3 of 26) AluSp|SINE|Alu 12604 NM_001164105 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chrX-5404 chrX 152906110 152906320 + 9.43 0.000 Intergenic Intergenic -8227 NM_001178110 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr13-837 chr13 73138544 73138754 + 9.43 0.000 Intergenic (TGTGTGTA)n|Simple_repeat|Simple_repeat 79644 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chrX-2011 chrX 15053992 15054202 + 9.43 0.000 Intergenic Intergenic 168806 NM_001177475 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr1-4297 chr1 22596153 22596363 + 9.43 0.000 intron (NM_020526, intron 9 of 16) intron (NM_020526, intron 9 of 16) 32769 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr18-963 chr18 46051952 46052162 + 9.43 0.000 intron (NM_024430, intron 1 of 14) intron (NM_024430, intron 1 of 14) 20203 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr20-1984 chr20 45867873 45868083 + 9.43 0.000 intron (NM_080752, intron 1 of 1) Tigger18a|DNA|TcMar-Tigger 10364 NM_080752 140831 Hs.292135 NM_080752 ENSG00000132801 ZSWIM3 C20orf164|PPP1R174 zinc finger SWIM-type containing 3 protein-coding chr7-4733 chr7 55602007 55602217 + 9.43 0.000 Intergenic L1PA16|LINE|L1 -29610 NM_001321243 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr2-6472 chr2 167245645 167245855 + 9.43 0.000 exon (NM_152381, exon 9 of 11) exon (NM_152381, exon 9 of 11) 58378 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr1-4144 chr1 6005467 6005677 + 9.43 0.000 intron (NM_001199861, intron 1 of 15) intron (NM_001199861, intron 1 of 15) 12896 NM_001199861 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr17-5242 chr17 17745261 17745471 + 9.43 0.000 intron (NM_030665, intron 2 of 5) L2c|LINE|L2 20936 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr12-1853 chr12 47870329 47870539 + 9.43 0.000 intron (NM_001017535, intron 4 of 10) intron (NM_001017535, intron 4 of 10) 34560 NM_000376 7421 Hs.524368 NM_000376 ENSG00000111424 VDR NR1I1|PPP1R163 vitamin D receptor protein-coding chr16-3357 chr16 47903982 47904192 + 9.43 0.000 intron (NR_110650, intron 4 of 5) intron (NR_110650, intron 4 of 5) -16957 NR_110649 100507534 Hs.407601 NR_110649 ENSG00000261325 LINC02192 - long intergenic non-protein coding RNA 2192 ncRNA chr1-14144 chr1 32128525 32128735 + 9.43 0.000 intron (NM_012316, intron 1 of 13) intron (NM_012316, intron 1 of 13) 20574 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr19-4745 chr19 28476423 28476633 + 9.43 0.000 intron (NR_110759, intron 5 of 9) intron (NR_110759, intron 5 of 9) -130160 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr6-8020 chr6 118157118 118157328 + 9.43 0.000 intron (NM_001029858, intron 2 of 7) MIRb|SINE|MIR 71320 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr11-3764 chr11 46894606 46894816 + 9.43 0.000 exon (NM_002334, exon 12 of 38) exon (NM_002334, exon 12 of 38) 23839 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chr20-1750 chr20 48635861 48636071 + 9.43 0.000 intron (NM_020820, intron 32 of 39) intron (NM_020820, intron 32 of 39) 192033 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr4-8428 chr4 153543540 153543750 + 9.43 0.000 intron (NM_001131007, intron 3 of 34) intron (NM_001131007, intron 3 of 34) 77285 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr15-3320 chr15 79507585 79507795 + 9.43 0.000 Intergenic MLT2F|LTR|ERVL 75174 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr12-2842 chr12 132450571 132450781 + 9.43 0.000 Intergenic Intergenic -39475 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr8-7343 chr8 134635808 134636018 + 9.43 0.000 intron (NM_020863, intron 3 of 15) intron (NM_020863, intron 3 of 15) 37842 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr14-4126 chr14 72488528 72488738 + 9.43 0.000 intron (NM_001370294, intron 12 of 14) intron (NM_001370294, intron 12 of 14) -28187 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chrX-842 chrX 119377688 119377898 + 9.43 0.000 Intergenic HERV16-int|LTR|ERVL -21543 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr7-8607 chr7 67474743 67474953 + 9.43 0.000 Intergenic L3|LINE|CR1 138872 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr8-2735 chr8 102616958 102617168 + 9.43 0.000 Intergenic MER58A|DNA|hAT-Charlie 36901 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr12-6232 chr12 29739433 29739643 + 9.43 0.000 intron (NM_001367875, intron 5 of 19) intron (NM_001367875, intron 5 of 19) 44404 NM_001193451 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr16-4436 chr16 53205807 53206017 + 9.43 0.000 intron (NM_001352127, intron 2 of 38) intron (NM_001352127, intron 2 of 38) -2053 NM_001352157 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr2-7375 chr2 3708182 3708392 + 9.43 0.000 intron (NM_001365580, intron 1 of 9) intron (NM_001365580, intron 1 of 9) 1445 NM_001365580 728597 Hs.304233 NM_001287444 ENSG00000214866 DCDC2C - doublecortin domain containing 2C protein-coding chr7-2271 chr7 5736698 5736908 + 9.43 0.000 intron (NM_207111, intron 5 of 16) SVA_C|Retroposon|SVA -24893 NR_106934 102466203 NR_106934 ENSG00000283419 MIR6874 hsa-mir-6874 microRNA 6874 ncRNA chr5-3223 chr5 91457929 91458139 + 9.43 0.000 Intergenic Zaphod2|DNA|hAT-Tip100 -74717 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr1-12967 chr1 154278450 154278660 + 9.43 0.000 Intergenic AluSz|SINE|Alu 5926 NM_001018837 10456 Hs.199625 NM_006118 ENSG00000143575 HAX1 HCLSBP1|HS1BP1|SCN3 HCLS1 associated protein X-1 protein-coding chr3-6912 chr3 157282676 157282886 + 9.43 0.000 intron (NM_024621, intron 12 of 13) intron (NM_024621, intron 12 of 13) -122021 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr8-5540 chr8 70104160 70104370 + 9.43 0.000 Intergenic Intergenic -33013 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr10-6841 chr10 23516570 23516780 + 9.43 0.000 Intergenic Intergenic 77406 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr9-8600 chr9 128308727 128308937 + 9.43 0.000 TTS (NM_001329862) TTS (NM_001329862) 13386 NM_001329862 26995 Hs.632685 NM_015679 ENSG00000167112 TRUB2 CLONE24922 TruB pseudouridine synthase family member 2 protein-coding chr19-4801 chr19 35087484 35087694 + 9.43 0.000 intron (NR_024561, intron 1 of 3) MLT1K|LTR|ERVL-MaLR 18682 NR_024561 100128675 Hs.633989 NR_024561 ENSG00000227392 HPN-AS1 - HPN antisense RNA 1 ncRNA chr19-3310 chr19 4708160 4708370 + 9.43 0.000 intron (NM_139159, intron 4 of 21) LTR42|LTR|ERVL 15577 NM_139159 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr5-8131 chr5 99197777 99197987 + 9.43 0.000 Intergenic SATR1|Satellite|Satellite -268168 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr3-7218 chr3 193297347 193297557 + 9.43 0.000 intron (NM_198505, intron 25 of 29) intron (NM_198505, intron 25 of 29) -9792 NR_046758 100874218 Hs.407490 NR_046758 ATP13A5-AS1 - ATP13A5 antisense RNA 1 ncRNA chr9-8800 chr9 134338551 134338761 + 9.43 0.000 intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) 12201 NM_002957 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr10-7161 chr10 103153234 103153444 + 9.43 0.000 5' UTR (NM_001351192, exon 1 of 18) 5' UTR (NM_001351192, exon 1 of 18) 482 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr2-6364 chr2 104869800 104870010 + 9.43 0.000 non-coding (NR_110374, exon 2 of 2) non-coding (NR_110374, exon 2 of 2) 2690 NR_110374 102682016 Hs.638438 NR_110373 ENSG00000229743 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA chr12-4870 chr12 62090047 62090257 + 9.43 0.000 intron (NM_178539, intron 1 of 4) intron (NM_178539, intron 1 of 4) 102687 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr3-10058 chr3 106729539 106729749 + 9.43 0.000 Intergenic Intergenic 510994 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr10-3322 chr10 4383824 4384034 + 9.43 0.000 promoter-TSS (NR_108054) promoter-TSS (NR_108054) -317 NR_108054 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr9-4603 chr9 104340332 104340542 + 9.43 0.000 Intergenic Intergenic 70208 NR_135141 105376194 Hs.553289 NR_135141 LOC105376194 - uncharacterized LOC105376194 ncRNA chr16-4275 chr16 25176063 25176273 + 9.43 0.000 intron (NM_001032391, intron 8 of 8) intron (NM_001032391, intron 8 of 8) -27136 NR_039998 100506655 Hs.657576 NR_039998 ENSG00000260034 LCMT1-AS2 - LCMT1 antisense RNA 2 ncRNA chr14-4382 chr14 28176833 28177043 + 9.43 0.000 Intergenic L1MEd|LINE|L1 -503717 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chr1-8811 chr1 2115834 2116044 + 9.43 0.000 intron (NM_001033582, intron 1 of 14) MER21C|LTR|ERVL 11223 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chrX-796 chrX 53913262 53913472 + 9.43 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 129780 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr9-8707 chr9 131274564 131274774 + 9.43 0.000 intron (NM_033387, intron 1 of 1) intron (NM_033387, intron 1 of 1) 1841 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr12-5182 chr12 104482857 104483067 + 9.43 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) 26014 NM_001173982 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr6-1700 chr6 21808505 21808715 + 9.43 0.000 intron (NR_015410, intron 4 of 11) intron (NR_015410, intron 4 of 11) 142197 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr17-2891 chr17 39936034 39936244 + 9.43 0.000 Intergenic Intergenic -5335 NM_001195545 100505591 Hs.145136 NM_001195545 ENSG00000204913 LRRC3C - leucine rich repeat containing 3C protein-coding chr5-8883 chr5 155129475 155129685 + 9.43 0.000 Intergenic L2b|LINE|L2 115825 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr1-5625 chr1 20607802 20608012 + 9.43 0.000 intron (NM_001785, intron 2 of 3) intron (NM_001785, intron 2 of 3) 18810 NM_001785 978 Hs.466910 NM_001785 ENSG00000158825 CDA CDD cytidine deaminase protein-coding chr7-7444 chr7 82908462 82908672 + 9.43 0.000 intron (NM_033026, intron 8 of 24) intron (NM_033026, intron 8 of 24) 254317 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr4-3043 chr4 139030327 139030537 + 9.43 0.000 intron (NM_012118, intron 1 of 2) L2b|LINE|L2 14651 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr3-6534 chr3 117515457 117515667 + 9.43 0.000 Intergenic Intergenic 175363 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr12-2730 chr12 6694437 6694647 + 9.43 0.000 3' UTR (NM_001244014, exon 5 of 5) 3' UTR (NM_001244014, exon 5 of 5) -4970 NM_001135734 171017 Hs.103315 NM_133476 ENSG00000126746 ZNF384 CAGH1|CAGH1A|CIZ|ERDA2|NMP4|NP|TNRC1 zinc finger protein 384 protein-coding chr13-1310 chr13 101943998 101944208 + 9.43 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) 23643 NR_039603 100616110 NR_039603 ENSG00000265164 MIR2681 - microRNA 2681 ncRNA chr1-9830 chr1 61210682 61210892 + 9.43 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 42731 NR_104180 645030 Hs.632410 NR_104180 ENSG00000237853 NFIA-AS1 - NFIA antisense RNA 1 ncRNA chr11-3148 chr11 47392977 47393187 + 9.43 0.000 Intergenic Intergenic -7888 NR_039707 100616222 NR_039707 ENSG00000264583 MIR4487 mir-4487 microRNA 4487 ncRNA chr4-8446 chr4 154926688 154926898 + 9.43 0.000 Intergenic Intergenic 145288 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr13-2775 chr13 99638566 99638776 + 9.43 0.000 intron (NR_104592, intron 1 of 9) MIR|SINE|MIR -4388 NR_036191 100422861 NR_036191 ENSG00000263615 MIR4306 mir-4306 microRNA 4306 ncRNA chr10-5941 chr10 121626109 121626319 + 9.43 0.000 Intergenic MIRc|SINE|MIR -27756 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr4-5182 chr4 158371210 158371420 + 9.43 0.000 Intergenic Intergenic -150399 NM_001363776 59350 Hs.591686 NM_021634 ENSG00000171509 RXFP1 LGR7|RXFPR1 relaxin family peptide receptor 1 protein-coding chrX-4595 chrX 72483942 72484152 + 9.43 0.000 intron (NM_001166448, intron 4 of 4) intron (NM_001166448, intron 4 of 4) 88796 NM_018486 55869 Hs.310536 NM_018486 ENSG00000147099 HDAC8 CDA07|CDLS5|HD8|HDACL1|KDAC8|MRXS6|RPD3|WTS histone deacetylase 8 protein-coding chr9-5145 chr9 37750177 37750387 + 9.43 0.000 Intergenic Intergenic -3521 NM_001286950 158234 Hs.655614 NM_144964 ENSG00000165275 TRMT10B RG9MTD3|bA3J10.9 tRNA methyltransferase 10B protein-coding chr2-3990 chr2 85724732 85724942 + 9.43 0.000 Intergenic L1M6B|LINE|L1 -29154 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr20-2608 chr20 40122019 40122229 + 9.43 0.000 Intergenic LTR16A|LTR|ERVL 117663 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr2-13299 chr2 129626625 129626835 + 9.43 0.000 Intergenic Intergenic 250761 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr12-6978 chr12 29307159 29307369 + 9.43 0.000 intron (NM_001271783, intron 4 of 11) intron (NM_001271783, intron 4 of 11) 10584 NR_103860 100506606 Hs.298851 NR_103860 ENSG00000257176 LOC100506606 - uncharacterized LOC100506606 ncRNA chr7-3548 chr7 13144838 13145048 + 9.43 0.000 Intergenic Intergenic 457310 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr1-10684 chr1 186849969 186850179 + 9.43 0.000 intron (NM_024420, intron 1 of 17) MER112|DNA|hAT-Charlie 21125 NM_001311193 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr10-5894 chr10 118184744 118184954 + 9.43 0.000 intron (NR_026940, intron 3 of 3) intron (NR_026940, intron 3 of 3) -137908 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr10-8039 chr10 63698941 63699151 + 9.43 0.000 Intergenic Intergenic -177156 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr7-6434 chr7 158811601 158811811 + 9.43 0.000 intron (NM_020728, intron 1 of 21) L1MEg|LINE|L1 17803 NM_001367773 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr5-8241 chr5 110497141 110497351 + 9.43 0.000 intron (NM_001039763, intron 12 of 13) intron (NM_001039763, intron 12 of 13) 16669 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr9-6957 chr9 101572068 101572278 + 9.43 0.000 3' UTR (NM_133445, exon 9 of 9) 3' UTR (NM_133445, exon 9 of 9) 22796 NM_147180 5535 Hs.151167 NM_147180 ENSG00000188386 PPP3R2 PPP3RL protein phosphatase 3 regulatory subunit B, beta protein-coding chr8-5743 chr8 139655551 139655761 + 9.43 0.000 intron (NR_104210, intron 1 of 3) MIR3|SINE|MIR 47467 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr2-2798 chr2 29216377 29216587 + 9.43 0.000 intron (NM_004304, intron 23 of 28) intron (NM_004304, intron 23 of 28) 7418 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr2-5645 chr2 193199855 193200065 + 9.43 0.000 Intergenic LTR27D|LTR|ERV1 450115 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr6-6319 chr6 45741951 45742161 + 9.43 0.000 Intergenic Intergenic 195541 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr5-3016 chr5 9335299 9335509 + 9.43 0.000 intron (NM_003966, intron 4 of 22) intron (NM_003966, intron 4 of 22) -175929 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chrX-5362 chrX 149860540 149860750 + 9.43 0.000 intron (NR_109813, intron 2 of 2) L1PA15|LINE|L1 -20496 NM_001166400 4107 Hs.522803 NM_005364 ENSG00000156009 MAGEA8 CT1.8|MAGE8 MAGE family member A8 protein-coding chr4-2364 chr4 3946735 3946945 + 9.43 0.000 intron (NR_130742, intron 3 of 3) intron (NR_130742, intron 3 of 3) 8588 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr9-3422 chr9 134864634 134864844 + 9.43 0.000 intron (NR_103451, intron 1 of 1) intron (NR_103451, intron 1 of 1) 7879 NR_103451 101448202 Hs.679677 NR_103451 LOC101448202 - uncharacterized LOC101448202 ncRNA chr2-6474 chr2 170322633 170322843 + 9.43 0.000 intron (NM_001083615, intron 7 of 33) intron (NM_001083615, intron 7 of 33) 28205 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr4-6221 chr4 57315884 57316094 + 9.43 0.000 Intergenic L2c|LINE|L2 -109883 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr3-6261 chr3 70512627 70512837 + 9.43 0.000 Intergenic Intergenic -200094 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr8-2086 chr8 131107253 131107463 + 9.43 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -66449 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr20-2235 chr20 87633 87843 + 9.43 0.000 promoter-TSS (NM_153325) promoter-TSS (NM_153325) 66 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr22-2777 chr22 41515020 41515230 + 9.43 0.000 intron (NM_001098, intron 4 of 17) MIR3|SINE|MIR 29345 NM_001018050 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding chr15-3522 chr15 99855621 99855831 + 9.43 0.000 intron (NR_135737, intron 3 of 4) L1PA8A|LINE|L1 48703 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr3-5026 chr3 30857818 30858028 + 9.43 0.000 intron (NM_207359, intron 2 of 14) L2a|LINE|L2 36738 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr12-5901 chr12 59313416 59313626 + 9.43 0.000 Intergenic LTR78|LTR|ERV1 -282508 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr15-2072 chr15 62366204 62366414 + 9.43 0.000 Intergenic LTR33A_|LTR|ERVL 23280 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr13-2131 chr13 98192156 98192366 + 9.43 0.000 intron (NM_005766, intron 1 of 26) intron (NM_005766, intron 1 of 26) -14992 NM_178861 140432 Hs.296045 NM_178861 ENSG00000139797 RNF113B RNF161|ZNF183L1|bA10G5.1 ring finger protein 113B protein-coding chr8-5966 chr8 20946094 20946304 + 9.43 0.000 Intergenic L1ME2|LINE|L1 -7434 NR_130774 102467222 Hs.444226 NR_130773 ENSG00000253147 LOC102467222 - uncharacterized LOC102467222 ncRNA chr6-5118 chr6 120714173 120714383 + 9.43 0.000 Intergenic L1M1|LINE|L1 620202 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr13-1510 chr13 20927161 20927371 + 9.43 0.000 Intergenic AluSc8|SINE|Alu 22162 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr6-5062 chr6 114135437 114135647 + 9.43 0.000 intron (NR_125845, intron 6 of 9) intron (NR_125845, intron 6 of 9) -72665 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr4-7182 chr4 40729947 40730157 + 9.43 0.000 Intergenic AluSz|SINE|Alu -19903 NM_001330648 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr2-2303 chr2 85309235 85309445 + 9.43 0.000 exon (NM_031283, exon 12 of 12) exon (NM_031283, exon 12 of 12) 18649 NM_001206840 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr9-5703 chr9 124490212 124490422 + 9.43 0.000 intron (NM_004959, intron 6 of 6) intron (NM_004959, intron 6 of 6) 17082 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr17-7351 chr17 6627313 6627523 + 9.43 0.000 intron (NR_147088, intron 3 of 17) intron (NR_147088, intron 3 of 17) 13293 NM_014804 9851 Hs.28070 NM_014804 ENSG00000198920 KIAA0753 MNR|OFIP KIAA0753 protein-coding chr11-6975 chr11 115696505 115696715 + 9.43 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 38152 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr8-6978 chr8 107724805 107725015 + 9.43 0.000 Intergenic Intergenic -226992 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr4-7333 chr4 56653802 56654012 + 9.43 0.000 intron (NM_001145460, intron 3 of 4) intron (NM_001145460, intron 3 of 4) 2615 NM_139211 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding chr4-8516 chr4 162434047 162434257 + 9.43 0.000 Intergenic L1PA16|LINE|L1 -270118 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr21-1562 chr21 10643388 10643598 + 9.43 0.000 Intergenic AluSc|SINE|Alu 121979 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr3-6644 chr3 127875426 127875636 + 9.43 0.000 Intergenic Intergenic -39701 NM_001370224 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr11-6926 chr11 110050701 110050911 + 9.43 0.000 Intergenic FLAM_A|SINE|Alu -42586 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr19-5657 chr19 6327153 6327363 + 9.43 0.000 intron (NM_133492, intron 1 of 5) AluSx|SINE|Alu 6354 NM_133492 125981 Hs.352609 NM_133492 ENSG00000167769 ACER1 ALKCDase1|ASAH3 alkaline ceramidase 1 protein-coding chr7-7725 chr7 558920 559130 + 9.43 0.000 intron (NM_001164760, intron 9 of 10) intron (NM_001164760, intron 9 of 10) -2933 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chr17-3349 chr17 77914969 77915179 + 9.43 0.000 Intergenic Intergenic -30987 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr1-12383 chr1 7178912 7179122 + 9.43 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 210737 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr1-4993 chr1 62321908 62322118 + 9.43 0.000 Intergenic Intergenic -2579 NM_001320269 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chr1-10401 chr1 156832809 156833019 + 9.43 0.000 intron (NM_001007792, intron 1 of 16) L2b|LINE|L2 -16066 NM_001161441 9047 Hs.103527 NM_003975 ENSG00000027869 SH2D2A F2771|SCAP|TSAD|VRAP SH2 domain containing 2A protein-coding chr19-3388 chr19 14314407 14314617 + 9.43 0.000 intron (NR_134908, intron 3 of 3) intron (NR_134908, intron 3 of 3) -19231 NR_134916 101928845 Hs.531617 NR_134916 ENSG00000267147 LINC01842 - long intergenic non-protein coding RNA 1842 ncRNA chr7-1800 chr7 95500623 95500833 + 9.43 0.000 intron (NM_145872, intron 2 of 2) intron (NM_145872, intron 2 of 2) 14785 NM_016116 51666 Hs.602765 NM_016116 ENSG00000005981 ASB4 ASB-4 ankyrin repeat and SOCS box containing 4 protein-coding chr1-8450 chr1 107911494 107911704 + 9.43 0.000 intron (NM_006113, intron 1 of 26) intron (NM_006113, intron 1 of 26) 14376 NR_107006 102465839 NR_107006 ENSG00000275455 MIR7852 hsa-mir-7852 microRNA 7852 ncRNA chr18-2011 chr18 42482927 42483137 + 9.43 0.000 intron (NR_046174, intron 6 of 9) intron (NR_046174, intron 6 of 9) 296364 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr1-16395 chr1 223461331 223461541 + 9.43 0.000 Intergenic Intergenic 68021 NM_152610 164127 Hs.192090 NM_152610 ENSG00000178395 CCDC185 C1orf65 coiled-coil domain containing 185 protein-coding chr21-1836 chr21 41350009 41350219 + 9.43 0.000 intron (NM_058186, intron 7 of 7) intron (NM_058186, intron 7 of 7) -11913 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding chr20-3326 chr20 20914014 20914224 + 9.43 0.000 Intergenic Intergenic 192239 NR_147212 105372556 Hs.371339 NR_147212 ENSG00000225127 LINC00237 NCRNA00237 long intergenic non-protein coding RNA 237 ncRNA chr4-3801 chr4 108885279 108885489 + 9.43 0.000 intron (NM_198721, intron 17 of 36) intron (NM_198721, intron 17 of 36) -122331 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr11-3175 chr11 62930336 62930546 + 9.43 0.000 Intergenic Intergenic -9078 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr5-6436 chr5 158948113 158948323 + 9.43 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 149738 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr3-6207 chr3 62780286 62780496 + 9.43 0.000 intron (NM_003716, intron 1 of 29) AluJr|SINE|Alu 95025 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr2-11766 chr2 12493273 12493483 + 9.43 0.000 intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) -223494 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr16-4420 chr16 51989651 51989861 + 9.43 0.000 Intergenic Intergenic 84179 NM_001242473 388276 Hs.534669 NM_001242473 C16orf97 - chromosome 16 open reading frame 97 protein-coding chr5-7678 chr5 55004615 55004825 + 9.43 0.000 Intergenic Intergenic -19127 NM_007036 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr7-4565 chr7 5786735 5786945 + 9.43 0.000 Intergenic Intergenic -5177 NM_207116 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr17-6653 chr17 69758004 69758214 + 9.43 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 164122 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr8-6840 chr8 98358954 98359164 + 9.43 0.000 Intergenic Intergenic 34679 NR_162095 113218497 NR_162095 MIR9903 - microRNA 9903 ncRNA chr4-6772 chr4 6608821 6609031 + 9.43 0.000 intron (NM_001292038, intron 11 of 18) intron (NM_001292038, intron 11 of 18) -31165 NM_001272053 93621 Hs.406590 NM_033296 ENSG00000179010 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding chr16-3833 chr16 58770694 58770904 + 9.43 0.000 Intergenic 7SLRNA|srpRNA|srpRNA -36483 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr2-7817 chr2 46090599 46090809 + 9.43 0.000 intron (NM_005400, intron 11 of 14) intron (NM_005400, intron 11 of 14) -206703 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr1-8999 chr1 10657327 10657537 + 9.43 0.000 intron (NM_001079843, intron 7 of 20) intron (NM_001079843, intron 7 of 20) 139214 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr10-6075 chr10 130533232 130533442 + 9.43 0.000 Intergenic AluSz|SINE|Alu 396928 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr9-4669 chr9 121556664 121556874 + 9.43 0.000 Intergenic Intergenic -10333 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr1-10697 chr1 190975544 190975754 + 9.43 0.000 Intergenic Intergenic 252849 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr6-6341 chr6 54722486 54722696 + 9.43 0.000 Intergenic Intergenic -124180 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr10-8966 chr10 118884713 118884923 + 9.43 0.000 Intergenic L1ME2|LINE|L1 -129848 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr7-3627 chr7 39811299 39811509 + 9.43 0.000 Intergenic Intergenic 77836 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr4-5140 chr4 153082923 153083133 + 9.43 0.000 Intergenic Intergenic -69306 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr1-3876 chr1 51237867 51238077 + 9.43 0.000 intron (NM_014372, intron 1 of 2) intron (NM_014372, intron 1 of 2) 1699 NM_014372 26994 Hs.309641 NM_014372 ENSG00000123091 RNF11 CGI-123|SID1669 ring finger protein 11 protein-coding chr5-3602 chr5 109852287 109852497 + 9.43 0.000 intron (NM_002372, intron 19 of 21) L2c|LINE|L2 -30790 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr12-5183 chr12 104528386 104528596 + 9.43 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -63142 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr17-1618 chr17 79101350 79101560 + 9.43 0.000 intron (NM_001082575, intron 9 of 14) intron (NM_001082575, intron 9 of 14) 26518 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr2-8706 chr2 153475612 153475822 + 9.43 0.000 Intergenic Intergenic 3045 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr10-4574 chr10 107475458 107475668 + 9.43 0.000 Intergenic AluYb8|SINE|Alu -310857 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr21-1126 chr21 37102434 37102644 + 9.43 0.000 intron (NM_003316, intron 10 of 45) intron (NM_003316, intron 10 of 45) 19592 NM_003316 7267 Hs.368214 NM_003316 ENSG00000182670 TTC3 DCRR1|RNF105|TPRDIII tetratricopeptide repeat domain 3 protein-coding chr9-5654 chr9 122216391 122216601 + 9.43 0.000 intron (NM_199160, intron 5 of 8) MIR3|SINE|MIR 5244 NM_001242335 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr2-9753 chr2 84973161 84973371 + 9.43 0.000 intron (NM_020122, intron 1 of 6) L3b|LINE|CR1 2105 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr7-2572 chr7 119964926 119965136 + 9.43 0.000 Intergenic L2a|LINE|L2 -57656 NR_131961 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr10-2876 chr10 97199454 97199664 + 9.43 0.000 intron (NR_037909, intron 11 of 14) intron (NR_037909, intron 11 of 14) -13600 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr3-4170 chr3 126534824 126535034 + 9.43 0.000 intron (NR_130715, intron 4 of 5) intron (NR_130715, intron 4 of 5) 10774 NM_152889 166012 Hs.292375 NM_152889 ENSG00000180767 CHST13 C4ST3 carbohydrate sulfotransferase 13 protein-coding chr9-3772 chr9 125798043 125798253 + 9.43 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 49965 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr17-3541 chr17 74921806 74922016 + 9.43 0.000 intron (NM_173477, intron 1 of 2) intron (NM_173477, intron 1 of 2) 1344 NM_001282489 124590 Hs.376688 NM_173477 ENSG00000182040 USH1G ANKS4A|SANS USH1 protein network component sans protein-coding chr18-2088 chr18 49316888 49317098 + 9.43 0.000 intron (NM_001353214, intron 8 of 17) L1MC2|LINE|L1 143652 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chrX-2297 chrX 53172318 53172528 + 9.43 0.000 Intergenic Intergenic 23065 NR_106955 102465539 NR_106955 ENSG00000276575 MIR6895 hsa-mir-6895 microRNA 6895 ncRNA chr9-3929 chr9 135530353 135530563 + 9.43 0.000 Intergenic L1MEb|LINE|L1 9018 NM_001252619 3933 Hs.530311 NM_002297 ENSG00000160349 LCN1 PMFA|TLC|TP|VEGP lipocalin 1 protein-coding chr11-6136 chr11 40763864 40764074 + 9.43 0.000 intron (NM_020929, intron 1 of 4) L1MA3|LINE|L1 -470839 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr2-4022 chr2 102072806 102073016 + 9.43 0.000 intron (NM_001320978, intron 1 of 11) intron (NM_001320978, intron 1 of 11) 2521 NM_001288706 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr6-7820 chr6 101118465 101118675 + 9.43 0.000 Intergenic Intergenic -237198 NM_001284271 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr1-3985 chr1 156295306 156295516 + 9.43 0.000 5' UTR (NM_001256609, exon 1 of 6) 5' UTR (NM_001256609, exon 1 of 6) 268 NM_144580 112770 Hs.202522 NM_144580 ENSG00000198715 GLMP C1orf85|NCU-G1 glycosylated lysosomal membrane protein protein-coding chr8-6293 chr8 42677258 42677468 + 9.43 0.000 Intergenic Intergenic -20003 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr5-6697 chr5 64609118 64609328 + 9.43 0.000 exon (NM_001029875, exon 6 of 6) exon (NM_001029875, exon 6 of 6) 33573 NM_001271890 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr12-1321 chr12 56189550 56189760 + 9.43 0.000 promoter-TSS (NM_003075) promoter-TSS (NM_003075) -172 NM_003075 6601 Hs.236030 NM_003075 ENSG00000139613 SMARCC2 BAF170|CRACC2|CSS8|Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 protein-coding chr19-3876 chr19 31675203 31675413 + 9.43 0.000 Intergenic MIRc|SINE|MIR 83027 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr2-6479 chr2 171629188 171629398 + 9.43 0.000 Intergenic LTR23|LTR|ERV1 -58176 NM_001271790 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr20-4100 chr20 40797563 40797773 + 9.43 0.000 Intergenic Intergenic -83045 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr6-3347 chr6 25476210 25476420 + 9.43 0.000 intron (NM_001173977, intron 11 of 36) intron (NM_001173977, intron 11 of 36) -175900 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr15-2216 chr15 92077379 92077589 + 9.43 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 223180 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr19-1782 chr19 45251046 45251256 + 9.43 0.000 promoter-TSS (NM_031417) promoter-TSS (NM_031417) -120 NM_031417 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr2-7614 chr2 26605381 26605591 + 9.43 0.000 intron (NM_001029881, intron 3 of 6) intron (NM_001029881, intron 3 of 6) 35880 NM_001029881 130106 Hs.591579 NM_001029881 ENSG00000157884 CIB4 KIP4 calcium and integrin binding family member 4 protein-coding chr5-3021 chr5 10284040 10284250 + 9.43 0.000 intron (NM_138809, intron 4 of 5) intron (NM_138809, intron 4 of 5) 23757 NM_138809 134147 Hs.192586 NM_138809 ENSG00000164237 CMBL JS-1 carboxymethylenebutenolidase homolog protein-coding chr12-4615 chr12 40505440 40505650 + 9.43 0.000 intron (NM_173600, intron 72 of 173) L2a|LINE|L2 112151 NM_173600 283463 Hs.632712 NM_173600 MUC19 MUC-19 mucin 19, oligomeric protein-coding chr12-4980 chr12 77578532 77578742 + 9.43 0.000 Intergenic Intergenic -252257 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr11-5324 chr11 57968893 57969103 + 9.43 0.000 Intergenic Intergenic -54883 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr1-16640 chr1 240022097 240022307 + 9.43 0.000 Intergenic MIR|SINE|MIR 14678 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chr19-4242 chr19 50867991 50868201 + 9.43 0.000 Intergenic Intergenic -5337 NM_001256080 3817 Hs.515560 NM_005551 ENSG00000167751 KLK2 KLK2A2|hGK-1|hK2 kallikrein related peptidase 2 protein-coding chr3-6366 chr3 87489493 87489703 + 9.43 0.000 Intergenic Intergenic -213014 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr1-15144 chr1 103588290 103588500 + 9.43 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 18991 NR_024438 648740 Hs.721681 NR_024438 ACTG1P4 ACTGP4 actin gamma 1 pseudogene 4 pseudo chr9-1625 chr9 130904041 130904251 + 9.43 0.000 exon (NM_032843, exon 7 of 7) exon (NM_032843, exon 7 of 7) -7334 NM_198180 347148 Hs.660704 NM_198180 ENSG00000188710 QRFP 26RFa|P518 pyroglutamylated RFamide peptide protein-coding chr1-15162 chr1 107030847 107031057 + 9.43 0.000 Intergenic L2a|LINE|L2 -25722 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr13-4202 chr13 91955978 91956188 + 9.43 0.000 intron (NM_004466, intron 6 of 7) L1M2|LINE|L1 396124 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr3-6772 chr3 142347574 142347784 + 9.43 0.000 intron (NM_019001, intron 32 of 41) AluSz6|SINE|Alu 100358 NM_019001 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr15-3523 chr15 99901244 99901454 + 9.43 0.000 Intergenic MSTA|LTR|ERVL-MaLR 94326 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr19-5507 chr19 46180799 46181009 + 9.43 0.000 Intergenic MLT2B3|LTR|ERVL 22158 NR_135234 645553 Hs.613068 NR_135234 IGFL2-AS1 - IGFL2 antisense RNA 1 ncRNA chr1-8613 chr1 192559194 192559404 + 9.43 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -16474 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G protein signaling 1 protein-coding chr6-4518 chr6 37985958 37986168 + 9.43 0.000 intron (NM_021943, intron 2 of 5) MER102c|DNA|hAT-Charlie 166336 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr16-6269 chr16 31148708 31148918 + 9.43 0.000 intron (NM_001258291, intron 4 of 13) intron (NM_001258291, intron 4 of 13) 1253 NM_173502 146547 Hs.256632 NM_173502 ENSG00000178226 PRSS36 - serine protease 36 protein-coding chr3-6312 chr3 76612632 76612842 + 9.43 0.000 Intergenic L1M1|LINE|L1 -427362 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr2-8596 chr2 139530124 139530334 + 9.43 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 632905 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr7-5331 chr7 27560901 27561111 + 9.43 0.000 intron (NM_152740, intron 4 of 7) L1MC|LINE|L1 -54968 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr1-14667 chr1 60156925 60157135 + 9.43 0.000 Intergenic Intergenic -83260 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr12-8011 chr12 112545250 112545460 + 9.43 0.000 Intergenic MER115|DNA|hAT-Tip100 -29881 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr11-8285 chr11 71706141 71706351 + 9.43 0.000 Intergenic LTR6B|LTR|ERV1 -81265 NM_001099653 55199 Hs.567527 NM_018172 ENSG00000158483 FAM86C1 FAM86C family with sequence similarity 86 member C1 protein-coding chr13-2937 chr13 31115198 31115408 + 9.43 0.000 Intergenic Intergenic 46601 NM_006644 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr1-15961 chr1 191889803 191890013 + 9.43 0.000 Intergenic L1MEf|LINE|L1 -268554 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr5-7840 chr5 68794126 68794336 + 9.43 0.000 Intergenic UCON54|Unknown|Unknown 235696 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr12-4568 chr12 29599538 29599748 + 9.43 0.000 intron (NM_001367875, intron 9 of 19) intron (NM_001367875, intron 9 of 19) -99950 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding chr15-4918 chr15 77677025 77677235 + 9.43 0.000 5' UTR (NM_001301191, exon 5 of 6) 5' UTR (NM_001301191, exon 5 of 6) 17079 NR_120361 101929478 Hs.569510 NR_120361 ENSG00000259281 LINGO1-AS2 - LINGO1 antisense RNA 2 ncRNA chr2-10840 chr2 57563454 57563664 + 9.43 0.000 Intergenic LTR16C|LTR|ERVL -344092 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr11-3935 chr11 131229178 131229388 + 9.43 0.000 Intergenic Intergenic -141332 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr18-1785 chr18 11550454 11550664 + 9.43 0.000 Intergenic HERV3-int|LTR|ERV1 -58999 NM_001282300 646000 NM_001282300 ENSG00000236396 SLC35G4 AMAC1L1|SLC35G4P solute carrier family 35 member G4 protein-coding chr15-1739 chr15 43370925 43371135 + 9.43 0.000 promoter-TSS (NM_152455) promoter-TSS (NM_152455) -71 NM_001286414 27229 Hs.584887 NM_014444 ENSG00000137822 TUBGCP4 76P|GCP-4|GCP4|Grip76|MCCRP3 tubulin gamma complex associated protein 4 protein-coding chr5-5248 chr5 119441848 119442058 + 9.43 0.000 Intergenic L1PA6|LINE|L1 -10544 NM_001292028 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr5-4538 chr5 16819765 16819975 + 9.43 0.000 intron (NM_012334, intron 2 of 40) intron (NM_012334, intron 2 of 40) 116418 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr2-13936 chr2 184531892 184532102 + 9.43 0.000 Intergenic Intergenic -66532 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr1-8127 chr1 10629807 10630017 + 9.43 0.000 exon (NM_004565, exon 9 of 9) exon (NM_004565, exon 9 of 9) 154962 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr5-3161 chr5 71782910 71783120 + 9.43 0.000 Intergenic Intergenic 63740 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr3-5980 chr3 47680085 47680295 + 9.43 0.000 intron (NM_003074, intron 15 of 27) AluJb|SINE|Alu -18496 NR_145791 109623484 NR_145791 SNORD146 - small nucleolar RNA, C/D box 146 snoRNA chr7-5641 chr7 54775212 54775422 + 9.43 0.000 intron (NR_110040, intron 1 of 2) MIRb|SINE|MIR 16004 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr1-7683 chr1 20561428 20561638 + 9.43 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 8960 NM_207334 163933 Hs.429179 NM_207334 ENSG00000183114 FAM43B - family with sequence similarity 43 member B protein-coding chr2-5105 chr2 18585940 18586150 + 9.43 0.000 intron (NM_001199104, intron 4 of 10) MIR|SINE|MIR 3524 NM_001199086 93034 Hs.744358 NM_033253 ENSG00000185013 NT5C1B AIRP|CN-IB|CN1B 5'-nucleotidase, cytosolic IB protein-coding chr6-2700 chr6 39001348 39001558 + 9.43 0.000 intron (NM_001371, intron 87 of 91) L2c|LINE|L2 -47328 NR_136563 2740 Hs.351883 NM_002062 ENSG00000112164 GLP1R GLP-1|GLP-1-R|GLP-1R glucagon like peptide 1 receptor protein-coding chr6-4907 chr6 96156408 96156618 + 9.43 0.000 intron (NM_006581, intron 2 of 2) MER61D|LTR|ERV1 140539 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr12-5739 chr12 125120640 125120850 + 9.43 0.000 intron (NM_001319839, intron 10 of 16) intron (NM_001319839, intron 10 of 16) 55310 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr3-4374 chr3 188558560 188558770 + 9.43 0.000 intron (NM_001167672, intron 4 of 9) intron (NM_001167672, intron 4 of 9) 10001 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr17-5188 chr17 13074115 13074325 + 9.43 0.000 Intergenic MSTB|LTR|ERVL-MaLR -56156 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr17-1851 chr17 19344627 19344837 + 9.43 0.000 promoter-TSS (NR_031591) promoter-TSS (NR_031591) -158 NR_031591 100302256 NR_031591 ENSG00000221540 MIR1180 MIRN1180|hsa-mir-1180|mir-1180 microRNA 1180 ncRNA chr11-7268 chr11 22774793 22775003 + 9.43 0.000 intron (NR_147085, intron 10 of 10) L2c|LINE|L2 54481 NR_135213 258010 Hs.349096 NM_148893 ENSG00000198168 SVIP - small VCP interacting protein protein-coding chr16-3895 chr16 76118637 76118847 + 9.43 0.000 Intergenic Intergenic -158659 NR_136210 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding chr22-4110 chr22 43700267 43700477 + 9.43 0.000 intron (NM_198856, intron 8 of 29) intron (NM_198856, intron 8 of 29) 111933 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr20-2435 chr20 24213018 24213228 + 9.43 0.000 intron (NR_040102, intron 2 of 3) MER4CL34|LTR|ERV1 13356 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chrX-4478 chrX 63274110 63274320 + 9.43 0.000 Intergenic Intergenic 77117 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr1-10161 chr1 109882328 109882538 + 9.43 0.000 Intergenic Intergenic -28416 NM_172210 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr3-3682 chr3 152886897 152887107 + 9.43 0.000 Intergenic LTR33|LTR|ERVL 51871 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr2-10437 chr2 203837134 203837344 + 9.43 0.000 Intergenic L1ME1|LINE|L1 -30532 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr5-2627 chr5 162634114 162634324 + 9.43 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 566577 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding chr7-8271 chr7 38155316 38155526 + 9.43 0.000 Intergenic L1PA13|LINE|L1 -22824 NM_001363347 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr19-2343 chr19 45872897 45873107 + 9.43 0.000 exon (NM_004497, exon 2 of 2) exon (NM_004497, exon 2 of 2) 8676 NM_004497 3171 Hs.36137 NM_004497 ENSG00000170608 FOXA3 FKHH3|HNF3G|TCF3G forkhead box A3 protein-coding chr8-6115 chr8 28383226 28383436 + 9.43 0.000 intron (NM_018660, intron 1 of 9) intron (NM_018660, intron 1 of 9) 3129 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr5-2607 chr5 133199836 133200046 + 9.43 0.000 intron (NM_015082, intron 15 of 15) intron (NM_015082, intron 15 of 15) 147928 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr11-4182 chr11 59173419 59173629 + 9.43 0.000 intron (NM_015177, intron 1 of 8) CpG 1392 NM_015177 23220 Hs.523696 NM_015177 ENSG00000110042 DTX4 RNF155 deltex E3 ubiquitin ligase 4 protein-coding chr5-1870 chr5 141821400 141821610 + 9.43 0.000 Intergenic Intergenic 44697 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr2-11571 chr2 952738 952948 + 9.43 0.000 intron (NM_018968, intron 1 of 16) intron (NM_018968, intron 1 of 16) -1451 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr5-4121 chr5 80586409 80586619 + 9.43 0.000 Intergenic Intergenic -16234 NM_001004441 340120 Hs.519404 NM_001004441 ENSG00000189127 ANKRD34B DP58 ankyrin repeat domain 34B protein-coding chr3-7824 chr3 104316252 104316462 + 9.43 0.000 Intergenic L1M1|LINE|L1 -792241 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr10-7464 chr10 8534808 8535018 + 9.43 0.000 Intergenic Intergenic 59478 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 - uncharacterized LOC105376398 ncRNA chr21-906 chr21 25133926 25134136 + 9.43 0.000 Intergenic Intergenic 293481 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LINC01692 - long intergenic non-protein coding RNA 1692 ncRNA chr6-5557 chr6 169951501 169951711 + 9.43 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -11017 NR_027434 100131532 Hs.703417 NR_027434 LOC100131532 - uncharacterized LOC100131532 ncRNA chr12-7159 chr12 48571945 48572155 + 9.43 0.000 Intergenic Intergenic -2004 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr9-4453 chr9 22052403 22052613 + 9.43 0.000 intron (NR_120536, intron 3 of 3) AmnSINE2|SINE|tRNA-Deu -43195 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr17-3154 chr17 58007695 58007905 + 9.43 0.000 promoter-TSS (NR_034041) promoter-TSS (NR_034041) -454 NR_034041 6426 Hs.68714 NM_006924 ENSG00000136450 SRSF1 ASF|SF2|SF2p33|SFRS1|SRp30a serine and arginine rich splicing factor 1 protein-coding chr11-7001 chr11 117226655 117226865 + 9.43 0.000 intron (NM_004716, intron 5 of 16) intron (NM_004716, intron 5 of 16) 5313 NM_004716 9159 Hs.648612 NM_004716 ENSG00000160613 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding chrX-2777 chrX 131175729 131175939 + 9.43 0.000 Intergenic Intergenic 93399 NM_001330651 158763 Hs.22905 NM_144967 ENSG00000147256 ARHGAP36 - Rho GTPase activating protein 36 protein-coding chr1-10573 chr1 174950076 174950286 + 9.43 0.000 intron (NR_121196, intron 1 of 5) intron (NR_121196, intron 1 of 5) 4080 NR_121196 101928696 Hs.666680 NR_121196 ENSG00000229531 LOC101928696 - uncharacterized LOC101928696 ncRNA chr11-9736 chr11 68610036 68610246 + 9.43 0.000 intron (NM_001164164, intron 22 of 22) intron (NM_001164164, intron 22 of 22) -74403 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr10-7395 chr10 3477985 3478195 + 9.43 0.000 intron (NR_155743, intron 3 of 4) intron (NR_155743, intron 3 of 4) 24748 NR_155745 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chrX-4045 chrX 18184462 18184672 + 9.43 0.000 intron (NM_153346, intron 8 of 13) L1M1|LINE|L1 36319 NM_153346 139105 Hs.403802 NM_153346 ENSG00000177324 BEND2 CXorf20 BEN domain containing 2 protein-coding chr17-2353 chr17 64682677 64682887 + 9.43 0.000 Intergenic L1ME4a|LINE|L1 -20475 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr9-8364 chr9 117425433 117425643 + 9.43 0.000 Intergenic Intergenic -10481 NM_014010 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr14-2936 chr14 44750777 44750987 + 9.43 0.000 Intergenic Intergenic 48244 NR_146457 101927351 Hs.196842 NR_146457 LINC02302 - long intergenic non-protein coding RNA 2302 ncRNA chr8-2365 chr8 30511871 30512081 + 9.43 0.000 intron (NM_001008710, intron 5 of 8) intron (NM_001008710, intron 5 of 8) -126575 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr2-5299 chr2 70301377 70301587 + 9.43 0.000 5' UTR (NM_001329757, exon 2 of 4) 5' UTR (NM_001329757, exon 2 of 4) 585 NM_001329752 84908 Hs.516077 NM_032822 ENSG00000035141 FAM136A - family with sequence similarity 136 member A protein-coding chr14-4989 chr14 76128625 76128835 + 9.43 0.000 Intergenic AluY|SINE|Alu -23155 NM_001322029 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chrX-3347 chrX 134000568 134000778 + 9.43 0.000 Intergenic Intergenic -15027 NM_004484 2719 Hs.644108 NM_004484 ENSG00000147257 GPC3 DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1 glypican 3 protein-coding chr5-7887 chr5 75086515 75086725 + 9.43 0.000 intron (NM_001164443, intron 22 of 24) intron (NM_001164443, intron 22 of 24) -34062 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding KQ090028.1-2 KQ090028.1 160127 160337 + 9.43 0.000 NA NA NA NA chr10-5887 chr10 117183449 117183659 + 9.43 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -13935 NM_181840 338567 Hs.449650 NM_181840 ENSG00000186795 KCNK18 K2p18.1|MGR13|TRESK|TRESK-2|TRESK2|TRIK potassium two pore domain channel subfamily K member 18 protein-coding chr17-3827 chr17 42559323 42559533 + 9.43 0.000 Intergenic AluJo|SINE|Alu -2720 NM_001042532 80347 Hs.296422 NM_025233 ENSG00000068120 COASY DPCK|NBIA6|NBP|PCH12|PPAT|UKR1|pOV-2 Coenzyme A synthase protein-coding KI270772.1-2 KI270772.1 38660 38870 + 9.43 0.000 NA NA NA NA chr5-3810 chr5 92139016 92139226 + 9.43 0.000 Intergenic LTR40b|LTR|ERVL -755804 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr17-5860 chr17 67837166 67837376 + 9.43 0.000 intron (NM_182641, intron 1 of 27) L1MC5|LINE|L1 11768 NM_004459 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr1-10179 chr1 110480343 110480553 + 9.43 0.000 promoter-TSS (NR_003599) promoter-TSS (NR_003599) -318 NR_003599 643160 Hs.532720 NR_003599 ENSG00000240194 CYMP - chymosin pseudogene pseudo chr2-13770 chr2 171391083 171391293 + 9.43 0.000 intron (NM_001321158, intron 1 of 8) Tigger1|DNA|TcMar-Tigger 42802 NM_001321154 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr7-5863 chr7 90721556 90721766 + 9.43 0.000 intron (NM_001287136, intron 1 of 13) L1MC5a|LINE|L1 11845 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr9-2781 chr9 112042419 112042629 + 9.43 0.000 intron (NM_001282640, intron 15 of 17) intron (NM_001282640, intron 15 of 17) 110424 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr12-1494 chr12 30926496 30926706 + 9.43 0.000 promoter-TSS (NM_001080509) promoter-TSS (NM_001080509) -147 NM_001370302 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr7-2910 chr7 132430895 132431105 + 9.43 0.000 intron (NM_001105543, intron 3 of 3) MIR|SINE|MIR 145470 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr5-2810 chr5 14458512 14458722 + 9.43 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -5366 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr11-5125 chr11 127714827 127715037 + 9.43 0.000 Intergenic MIRb|SINE|MIR 443862 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr5-5013 chr5 83692956 83693166 + 9.43 0.000 intron (NM_001884, intron 1 of 4) MER44A|DNA|TcMar-Tigger 27794 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr4-4337 chr4 35964093 35964303 + 9.43 0.000 Intergenic Intergenic 279741 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr1-10989 chr1 216690111 216690321 + 9.43 0.000 intron (NM_001134285, intron 3 of 8) L1ME2|LINE|L1 33213 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr15-2044 chr15 55628553 55628763 + 9.43 0.000 intron (NM_173814, intron 16 of 19) OldhAT1|DNA|hAT-Ac -39687 NM_015617 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr18-2126 chr18 54485863 54486073 + 9.43 0.000 Intergenic THE1D|LTR|ERVL-MaLR -101791 NM_001307955 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr5-4047 chr5 42021117 42021327 + 9.43 0.000 Intergenic L2c|LINE|L2 95941 NM_012176 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding chr21-849 chr21 28632821 28633031 + 9.43 0.000 Intergenic Intergenic 93608 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr13-1291 chr13 34699015 34699225 + 9.43 0.000 Intergenic Intergenic -58435 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr5-5548 chr5 147531136 147531346 + 9.43 0.000 Intergenic Intergenic -21173 NM_001197294 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr10-8179 chr10 71431377 71431587 + 9.43 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 34548 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr12-4219 chr12 104835652 104835862 + 9.43 0.000 intron (NM_032148, intron 11 of 11) intron (NM_032148, intron 11 of 11) 122533 NM_001352172 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr16-4395 chr16 50061951 50062161 + 9.43 0.000 Intergenic L1MC1|LINE|L1 -3914 NM_182922 55027 Hs.733027 NM_017939 ENSG00000155393 HEATR3 SYO1 HEAT repeat containing 3 protein-coding chr17-5523 chr17 42985234 42985444 + 9.43 0.000 intron (NM_001321381, intron 2 of 5) L2b|LINE|L2 4774 NM_173079 146923 Hs.632255 NM_173079 ENSG00000198863 RUNDC1 - RUN domain containing 1 protein-coding chr3-5373 chr3 149540224 149540434 + 9.43 0.000 intron (NM_001348362, intron 7 of 9) intron (NM_001348362, intron 7 of 9) 65632 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr17-6527 chr17 34452550 34452760 + 9.43 0.000 Intergenic L1MEb|LINE|L1 -89422 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr12-5917 chr12 65848103 65848313 + 9.43 0.000 intron (NM_001300918, intron 3 of 4) intron (NM_001300918, intron 3 of 4) -21234 NR_026825 204010 Hs.558686 NR_026825 ENSG00000241749 RPSAP52 RPSA_17_1251 ribosomal protein SA pseudogene 52 pseudo chr21-752 chr21 42468821 42469031 + 9.43 0.000 Intergenic L1MC5a|LINE|L1 27298 NM_001286506 89765 Hs.661069 NM_080860 ENSG00000160188 RSPH1 CT79|RSP44|RSPH10A|TSA2|TSGA2 radial spoke head component 1 protein-coding chr17-4086 chr17 79743183 79743393 + 9.43 0.000 Intergenic Intergenic 12345 NM_178543 339221 Hs.114084 NM_178543 ENSG00000182156 ENPP7 ALK-SMase|E-NPP 7|NPP-7|NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 protein-coding chr9-4444 chr9 19128840 19129050 + 9.43 0.000 Intergenic Intergenic -1339 NR_038064 123 Hs.3416 NM_001122 ENSG00000147872 PLIN2 ADFP|ADRP perilipin 2 protein-coding chr13-1538 chr13 27359146 27359356 + 9.43 0.000 Intergenic Intergenic -65368 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr7-8639 chr7 70478114 70478324 + 9.43 0.000 intron (NM_015570, intron 5 of 18) L1ME4a|LINE|L1 -653925 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr7-3561 chr7 19009395 19009605 + 9.43 0.000 Intergenic Intergenic 108136 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr8-3722 chr8 21055902 21056112 + 9.43 0.000 Intergenic L2b|LINE|L2 82021 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LINC02153 - long intergenic non-protein coding RNA 2153 ncRNA chr20-3788 chr20 22305199 22305409 + 9.43 0.000 Intergenic Intergenic -22503 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chrX-4009 chrX 16546037 16546247 + 9.43 0.000 Intergenic LTR16C|LTR|ERVL 80943 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr2-9961 chr2 6892950 6893160 + 9.43 0.000 intron (NM_080657, intron 4 of 5) MER58B|DNA|hAT-Charlie 15278 NM_080657 91543 Hs.17518 NM_080657 ENSG00000134321 RSAD2 2510004L01Rik|cig33|cig5|vig1 radical S-adenosyl methionine domain containing 2 protein-coding chr1-4214 chr1 146387160 146387370 + 9.43 0.000 Intergenic CpG 10458 NR_004408 26869 NR_004408 ENSG00000207513 RNU1-3 HSD4|RNU1G3 RNA, U1 small nuclear 3 snRNA chr18-1968 chr18 38013212 38013422 + 9.43 0.000 Intergenic ERVL-E-int|LTR|ERVL 356182 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr2-8612 chr2 141731114 141731324 + 9.43 0.000 intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 400482 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr11-4521 chr11 117592848 117593058 + 9.43 0.000 intron (NM_020693, intron 3 of 32) MIRb|SINE|MIR 204263 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr11-5081 chr11 114259599 114259809 + 9.43 0.000 Intergenic Intergenic -36109 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr3-4112 chr3 112111912 112112122 + 9.43 0.000 promoter-TSS (NR_030292) promoter-TSS (NR_030292) -784 NR_030292 693152 NR_030292 ENSG00000207940 MIR567 MIRN567|hsa-mir-567 microRNA 567 ncRNA chr17-5490 chr17 41660382 41660592 + 9.43 0.000 Intergenic MER5A1|DNA|hAT-Charlie -20288 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo chr5-3415 chr5 148844825 148845035 + 9.43 0.000 Intergenic L2a|LINE|L2 18337 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr4-4822 chr4 108083316 108083526 + 9.43 0.000 exon (NM_016269, exon 5 of 12) exon (NM_016269, exon 5 of 12) 78757 NM_001331027 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding chr5-3231 chr5 93580681 93580891 + 9.43 0.000 non-coding (NR_109822, exon 1 of 3) non-coding (NR_109822, exon 1 of 3) 534 NR_109822 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr15-2033 chr15 51260422 51260632 + 9.43 0.000 intron (NM_000103, intron 1 of 9) intron (NM_000103, intron 1 of 9) -4738 NM_001347253 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr5-3612 chr5 128789985 128790195 + 9.43 0.000 Intergenic AluSz|SINE|Alu -175037 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr11-5471 chr11 75625794 75626004 + 9.43 0.000 intron (NM_207577, intron 1 of 2) intron (NM_207577, intron 1 of 2) 42535 NM_033063 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr1-8039 chr1 236389155 236389365 + 9.43 0.000 Intergenic Intergenic -5026 NM_145861 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr22-2403 chr22 17077293 17077503 + 9.43 0.000 Intergenic MIRb|SINE|MIR -7561 NM_014339 23765 Hs.48353 NM_014339 ENSG00000177663 IL17RA CANDF5|CD217|CDw217|IL-17RA|IL17R|IMD51|hIL-17R interleukin 17 receptor A protein-coding chr10-7704 chr10 30014740 30014950 + 9.43 0.000 3' UTR (NM_001350001, exon 5 of 5) 3' UTR (NM_001350001, exon 5 of 5) 44741 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr20-858 chr20 62811914 62812124 + 9.43 0.000 intron (NM_007346, intron 6 of 6) intron (NM_007346, intron 6 of 6) -5031 NM_001853 1299 Hs.716639 NM_001853 ENSG00000092758 COL9A3 DJ885L7.4.1|EDM3|IDD|MED collagen type IX alpha 3 chain protein-coding chr5-6792 chr5 93927439 93927649 + 9.43 0.000 intron (NR_028080, intron 4 of 8) intron (NR_028080, intron 4 of 8) 184119 NM_032042 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr12-3395 chr12 104178376 104178586 + 9.43 0.000 Intergenic Intergenic -37298 NM_001093771 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr8-4116 chr8 72207346 72207556 + 9.43 0.000 intron (NR_033867, intron 18 of 19) L2c|LINE|L2 44183 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo chr11-6885 chr11 103528561 103528771 + 9.43 0.000 Intergenic Intergenic -321240 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr16-5989 chr16 5757920 5758130 + 9.43 0.000 Intergenic Intergenic 125558 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA chr1-6353 chr1 6995969 6996179 + 9.43 0.000 intron (NM_001349608, intron 2 of 21) MER74A|LTR|ERVL 210620 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr3-8799 chr3 5997931 5998141 + 9.43 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -747781 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr3-6829 chr3 148034477 148034687 + 9.43 0.000 Intergenic Intergenic -43577 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr13-2553 chr13 65631130 65631340 + 9.43 0.000 Intergenic L3|LINE|CR1 -234812 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr11-4329 chr11 71494321 71494531 + 9.43 0.000 intron (NM_018161, intron 18 of 20) Tigger3|DNA|TcMar-Tigger 20923 NR_106812 102466728 NR_106812 ENSG00000278349 MIR6754 hsa-mir-6754 microRNA 6754 ncRNA chr6-3632 chr6 125748384 125748594 + 9.43 0.000 Intergenic CpG -1143 NM_012259 23493 Hs.144287 NM_012259 ENSG00000135547 HEY2 CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32 hes related family bHLH transcription factor with YRPW motif 2 protein-coding chr1-10431 chr1 158650415 158650625 + 9.43 0.000 intron (NM_003126, intron 24 of 51) intron (NM_003126, intron 24 of 51) 36195 NM_003126 6708 Hs.119825 NM_003126 ENSG00000163554 SPTA1 EL2|HPP|HS3|SPH3|SPTA spectrin alpha, erythrocytic 1 protein-coding chr6-2640 chr6 158706346 158706556 + 9.43 0.000 intron (NM_001242394, intron 6 of 17) intron (NM_001242394, intron 6 of 17) 43048 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr10-8379 chr10 81231902 81232112 + 9.43 0.000 Intergenic Tigger4|DNA|TcMar-Tigger 582210 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr5-7213 chr5 8058621 8058831 + 9.43 0.000 Intergenic Intergenic 189578 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr9-4494 chr9 36992963 36993173 + 9.43 0.000 intron (NM_001280554, intron 4 of 8) Charlie1b|DNA|hAT-Charlie 41200 NM_016734 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr3-5023 chr3 30048473 30048683 + 9.43 0.000 Intergenic Intergenic -114422 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr1-3491 chr1 92030055 92030265 + 9.43 0.000 exon (NM_173567, exon 1 of 7) exon (NM_173567, exon 1 of 7) 175 NM_173567 253152 Hs.201555 NM_173567 ENSG00000172031 EPHX4 ABHD7|EH4|EPHXRP epoxide hydrolase 4 protein-coding chr19-2980 chr19 21604585 21604795 + 9.43 0.000 Intergenic HERV15-int|LTR|ERV1 -44978 NR_144514 400682 Hs.568075 NR_144514 LOC400682 - zinc finger protein 100-like pseudo chr13-2239 chr13 25144257 25144467 + 9.43 0.000 Intergenic Intergenic 27805 NM_199138 219287 Hs.528335 NM_152704 ENSG00000165566 AMER2 FAM123A APC membrane recruitment protein 2 protein-coding chr20-1249 chr20 37426423 37426633 + 9.43 0.000 Intergenic Intergenic 80400 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr14-4232 chr14 99598809 99599019 + 9.43 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 5293 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr5-8459 chr5 131456837 131457047 + 9.43 0.000 intron (NM_016340, intron 19 of 27) L1M7|LINE|L1 178287 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr8-6043 chr8 24091647 24091857 + 9.43 0.000 Intergenic MER5A1|DNA|hAT-Charlie -202288 NM_021777 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr8-2406 chr8 69390135 69390345 + 9.43 0.000 Intergenic L1MEg2|LINE|L1 58004 NR_110433 100505739 Hs.127115 NR_110433 LINC01603 - long intergenic non-protein coding RNA 1603 ncRNA chr19-4823 chr19 35866663 35866873 + 9.43 0.000 3' UTR (NM_001363667, exon 14 of 14) 3' UTR (NM_001363667, exon 14 of 14) -1677 NM_001024807 333 Hs.74565 NM_005166 ENSG00000105290 APLP1 APLP amyloid beta precursor like protein 1 protein-coding chr15-1604 chr15 78760233 78760443 + 9.43 0.000 intron (NM_014272, intron 23 of 23) (GCTGCCA)n|Simple_repeat|Simple_repeat 8301 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr21-475 chr21 44317525 44317735 + 9.43 0.000 intron (NM_001002021, intron 12 of 24) intron (NM_001002021, intron 12 of 24) 17577 NM_002626 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr11-6076 chr11 33145725 33145935 + 9.43 0.000 intron (NM_001326, intron 1 of 20) AluY|SINE|Alu 15650 NM_001326 1479 Hs.44402 NM_001326 ENSG00000176102 CSTF3 CSTF-77 cleavage stimulation factor subunit 3 protein-coding chr11-4445 chr11 96055347 96055557 + 9.43 0.000 intron (NM_032427, intron 2 of 4) intron (NM_032427, intron 2 of 4) -131245 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chrX-775 chrX 41692403 41692613 + 9.43 0.000 intron (NM_005300, intron 2 of 2) L3|LINE|CR1 3535 NM_001097579 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr6-6463 chr6 108501688 108501898 + 9.43 0.000 intron (NM_001323005, intron 10 of 11) Tigger1|DNA|TcMar-Tigger -58032 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr15-1089 chr15 56052425 56052635 + 9.43 0.000 Intergenic Intergenic -58918 NM_001329212 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr3-8514 chr3 134745712 134745922 + 9.43 0.000 Intergenic L1PA6|LINE|L1 -49443 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr10-5198 chr10 60788304 60788514 + 9.43 0.000 intron (NM_001786, intron 5 of 7) LTR41|LTR|ERVL 9931 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr11-3187 chr11 64503569 64503779 + 9.43 0.000 Intergenic MLT2B3|LTR|ERVL -52267 NM_018484 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr11-6218 chr11 46657355 46657565 + 9.43 0.000 intron (NM_001346358, intron 8 of 16) intron (NM_001346358, intron 8 of 16) 40184 NM_001346336 9776 Hs.127403 NM_014741 ENSG00000175224 ATG13 KIAA0652|PARATARG8 autophagy related 13 protein-coding chr2-8038 chr2 71212336 71212546 + 9.43 0.000 intron (NM_020459, intron 1 of 3) intron (NM_020459, intron 1 of 3) 14662 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr20-2289 chr20 4838948 4839158 + 9.43 0.000 Intergenic Intergenic -15445 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr1-10864 chr1 205333497 205333707 + 9.43 0.000 Intergenic Intergenic -11857 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chrX-3501 chrX 40828645 40828855 + 9.43 0.000 Intergenic HERVL40-int|LTR|ERVL 4446 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo chr22-1075 chr22 24182474 24182684 + 9.43 0.000 intron (NM_019601, intron 1 of 14) intron (NM_019601, intron 1 of 14) 1092 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr9-6805 chr9 35526616 35526826 + 9.43 0.000 intron (NM_001330740, intron 1 of 10) AluJo|SINE|Alu -11911 NM_001135999 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr17-5089 chr17 4514474 4514684 + 9.43 0.000 intron (NM_001124758, intron 2 of 12) intron (NM_001124758, intron 2 of 12) 15698 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr3-7156 chr3 186099270 186099480 + 9.43 0.000 intron (NM_004454, intron 5 of 12) intron (NM_004454, intron 5 of 12) 9714 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr15-2877 chr15 41981429 41981639 + 9.43 0.000 TTS (NM_001206670) TTS (NM_001206670) 8771 NR_120334 101928388 Hs.738043 NR_120334 ENSG00000246740 PLA2G4E-AS1 - PLA2G4E antisense RNA 1 ncRNA chr3-6514 chr3 114005650 114005860 + 9.43 0.000 exon (NM_020817, exon 10 of 17) exon (NM_020817, exon 10 of 17) 50771 NM_020817 57577 Hs.477159 NM_020817 ENSG00000163617 CCDC191 KIAA1407 coiled-coil domain containing 191 protein-coding chr14-3364 chr14 91502473 91502683 + 9.43 0.000 intron (NM_001284281, intron 1 of 12) intron (NM_001284281, intron 1 of 12) 7126 NM_001366432 55671 Hs.533887 NM_017936 ENSG00000100796 PPP4R3A FLFL1|KIAA2010|MSTP033|PP4R3|PP4R3A|SMEK1|smk-1|smk1 protein phosphatase 4 regulatory subunit 3A protein-coding chr5-8453 chr5 130110809 130111019 + 9.43 0.000 intron (NM_175856, intron 2 of 2) intron (NM_175856, intron 2 of 2) 206449 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr9-4461 chr9 26652520 26652730 + 9.43 0.000 Intergenic L2|LINE|L2 240177 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr6-5579 chr6 33722306 33722516 + 9.43 0.000 3' UTR (NM_054111, exon 6 of 6) 3' UTR (NM_054111, exon 6 of 6) -10711 NM_032340 84300 Hs.732448 NM_032340 ENSG00000137288 UQCC2 C6orf125|C6orf126|Cbp6|M19|MC3DN7|MNF1|bA6B20.2 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding chr20-2458 chr20 31510652 31510862 + 9.43 0.000 Intergenic AluJb|SINE|Alu -3653 NM_178580 81502 Hs.373741 NM_030789 ENSG00000101294 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 histocompatibility minor 13 protein-coding chr12-4895 chr12 65362220 65362430 + 9.43 0.000 intron (NM_001031679, intron 4 of 6) MLT1L|LTR|ERVL-MaLR 83338 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr1-4152 chr1 10670078 10670288 + 9.43 0.000 intron (NM_001079843, intron 4 of 20) intron (NM_001079843, intron 4 of 20) 126463 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr13-2740 chr13 97004812 97005022 + 9.43 0.000 Intergenic Intergenic -10187 NM_001346195 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding chr4-8364 chr4 148263723 148263933 + 9.43 0.000 intron (NM_000901, intron 2 of 8) L2c|LINE|L2 178586 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr1-8891 chr1 5904478 5904688 + 9.43 0.000 intron (NR_111987, intron 16 of 32) intron (NR_111987, intron 16 of 32) -41842 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr17-2777 chr17 2195812 2196022 + 9.43 0.000 intron (NM_001256827, intron 3 of 11) intron (NM_001256827, intron 3 of 11) -36761 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr19-5004 chr19 47161973 47162183 + 9.43 0.000 intron (NM_005500, intron 5 of 8) MER3|DNA|hAT-Charlie 31243 NM_005500 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr11-7256 chr11 15320921 15321131 + 9.43 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 171924 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr2-12730 chr2 81944141 81944351 + 9.43 0.000 Intergenic Intergenic -477300 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr6-5141 chr6 124084257 124084467 + 9.43 0.000 intron (NM_001040214, intron 1 of 6) Tigger3a|DNA|TcMar-Tigger -198643 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr3-3250 chr3 48591526 48591736 + 9.43 0.000 intron (NM_000094, intron 11 of 117) intron (NM_000094, intron 11 of 117) 3529 NM_000094 1294 Hs.476218 NM_000094 ENSG00000114270 COL7A1 EBD1|EBDCT|EBR1|NDNC8 collagen type VII alpha 1 chain protein-coding chr2-1630 chr2 240973080 240973290 + 9.43 0.000 intron (NM_001351305, intron 27 of 31) MER121B|DNA|hAT? -5734 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chrX-1285 chrX 111781485 111781695 + 9.43 0.000 intron (NM_012471, intron 8 of 10) AluSg|SINE|Alu -94461 NM_001195576 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr11-6524 chr11 69130426 69130636 + 9.43 0.000 Intergenic MIRb|SINE|MIR -25404 NM_001369201 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chr5-5657 chr5 158288307 158288517 + 9.43 0.000 Intergenic Intergenic 121361 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr8-2414 chr8 88390645 88390855 + 9.43 0.000 Intergenic L1MA8|LINE|L1 -63267 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr19-4986 chr19 46536626 46536836 + 9.43 0.000 intron (NM_001370550, intron 1 of 2) L2c|LINE|L2 -40864 NM_020709 57469 Hs.7193 NM_020709 ENSG00000204851 PNMA8B PNMAL2 PNMA family member 8B protein-coding chr9-2720 chr9 91712881 91713091 + 9.43 0.000 Intergenic Intergenic -76641 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr3-6721 chr3 135567484 135567694 + 9.43 0.000 Intergenic Intergenic -398139 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr2-5279 chr2 63242553 63242763 + 9.43 0.000 intron (NR_148705, intron 13 of 16) intron (NR_148705, intron 13 of 16) -123116 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr14-2962 chr14 49992855 49993065 + 9.43 0.000 intron (NR_126498, intron 1 of 3) intron (NR_126498, intron 1 of 3) 174 NR_126499 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr7-5148 chr7 5883881 5884091 + 9.43 0.000 exon (NM_001097622, exon 3 of 4) exon (NM_001097622, exon 3 of 4) 3188 NM_001097622 654231 Hs.571315 NM_001097622 ENSG00000122543 OCM OCM1|OM|ONCM oncomodulin protein-coding chr11-10093 chr11 85969197 85969407 + 9.43 0.000 intron (NM_001008660, intron 19 of 19) intron (NM_001008660, intron 19 of 19) 99782 NM_001206946 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr11-9054 chr11 28758050 28758260 + 9.43 0.000 Intergenic Intergenic -280607 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr18-1941 chr18 35547142 35547352 + 9.43 0.000 Intergenic L1MCa|LINE|L1 -44490 NR_039771 100616257 NR_039771 ENSG00000283514 MIR3975 - microRNA 3975 ncRNA chr22-2678 chr22 36974690 36974900 + 9.43 0.000 Intergenic Intergenic 9547 NR_038954 100506241 Hs.640023 NR_038954 ENSG00000215403 LL22NC01-81G9.3 - uncharacterized protein FLJ39582-like ncRNA chr1-4320 chr1 41823385 41823595 + 9.43 0.000 intron (NM_024503, intron 1 of 8) MIRb|SINE|MIR 95432 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr6-3957 chr6 96316106 96316316 + 9.43 0.000 Intergenic Intergenic -205595 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr1-6758 chr1 70916449 70916659 + 9.43 0.000 intron (NR_028293, intron 2 of 4) L1PA16|LINE|L1 -129952 NR_038420 100132618 Hs.720513 NR_038420 ZRANB2-AS1 - ZRANB2 antisense RNA 1 ncRNA chr1-10615 chr1 178506137 178506347 + 9.43 0.000 Intergenic L2b|LINE|L2 -6867 NM_032126 84066 Hs.534501 NM_032126 ENSG00000240021 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding chr11-3540 chr11 17267720 17267930 + 9.43 0.000 Intergenic Intergenic -8889 NM_001352666 4925 Hs.654599 NM_005013 ENSG00000070081 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding chr21-922 chr21 34665773 34665983 + 9.43 0.000 Intergenic L2a|LINE|L2 -3116 NM_053277 54102 Hs.473695 NM_053277 ENSG00000159212 CLIC6 CLIC1L chloride intracellular channel 6 protein-coding chr4-2654 chr4 185202228 185202438 + 9.43 0.000 intron (NM_020827, intron 1 of 4) AluJb|SINE|Alu 1667 NM_020827 57587 Hs.535734 NM_020827 ENSG00000164323 CFAP97 KIAA1430|hmw cilia and flagella associated protein 97 protein-coding chrX-3369 chrX 148236264 148236474 + 9.43 0.000 Intergenic L2a|LINE|L2 255032 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr4-3610 chr4 7898328 7898538 + 9.43 0.000 intron (NM_001371091, intron 1 of 17) L2|LINE|L2 -26125 NM_001371090 chr18-1721 chr18 3270952 3271162 + 9.43 0.000 intron (NM_001144945, intron 1 of 3) intron (NM_001144945, intron 1 of 3) 8338 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr21-1767 chr21 36329309 36329519 + 9.43 0.000 intron (NM_001320445, intron 1 of 15) MER21C|LTR|ERVL 9217 NM_015358 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr1-15064 chr1 95550846 95551056 + 9.43 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 40835 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA chr2-8949 chr2 188036979 188037189 + 9.43 0.000 intron (NR_126396, intron 2 of 2) HERVH-int|LTR|ERV1 250607 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr11-6332 chr11 62431448 62431658 + 9.43 0.000 Intergenic Intergenic 12520 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr19-5018 chr19 47773890 47774100 + 9.43 0.000 Intergenic Intergenic -4708 NM_003009 6415 Hs.631549 NM_003009 ENSG00000178980 SELENOW SEPW1|selW selenoprotein W protein-coding chr7-7331 chr7 47355793 47356003 + 9.43 0.000 intron (NM_022748, intron 17 of 30) intron (NM_022748, intron 17 of 30) 108905 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr21-521 chr21 36325673 36325883 + 9.43 0.000 intron (NM_001320445, intron 1 of 15) MER44B|DNA|TcMar-Tigger 5581 NM_015358 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr21-1609 chr21 17861182 17861392 + 9.43 0.000 intron (NR_024354, intron 1 of 2) intron (NR_024354, intron 1 of 2) 24321 NR_024354 54075 Hs.404306 NR_024354 CHODL-AS1 C21orf39|NCRNA00157 CHODL antisense RNA 1 ncRNA chr18-1084 chr18 47405815 47406025 + 9.43 0.000 intron (NR_147192, intron 1 of 2) MamGypLTR2c|LTR|Gypsy 25424 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr12-3955 chr12 7937987 7938197 + 9.43 0.000 Intergenic Intergenic -1905 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr1-11486 chr1 110271872 110272082 + 9.43 0.000 Intergenic Intergenic 61663 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr5-4148 chr5 91491379 91491589 + 9.43 0.000 Intergenic Intergenic -108167 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr18-1437 chr18 23094704 23094914 + 9.43 0.000 Intergenic Intergenic -39755 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr1-10632 chr1 180211928 180212138 + 9.43 0.000 Intergenic Intergenic -18231 NM_033343 89884 Hs.658487 NM_033343 ENSG00000121454 LHX4 CPHD4 LIM homeobox 4 protein-coding chr2-13765 chr2 170839915 170840125 + 9.43 0.000 intron (NM_000817, intron 6 of 16) intron (NM_000817, intron 6 of 16) 23133 NM_000817 2571 Hs.420036 NM_000817 ENSG00000128683 GAD1 CPSQ1|GAD|SCP glutamate decarboxylase 1 protein-coding chr10-5844 chr10 113497818 113498028 + 9.43 0.000 Intergenic MER31B|LTR|ERV1 -52908 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr15-4061 chr15 68051124 68051334 + 9.43 0.000 Intergenic MER65-int|LTR|ERV1 -2950 NM_016166 8554 Hs.162458 NM_016166 ENSG00000033800 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT 1 protein-coding chr13-1342 chr13 43815334 43815544 + 9.43 0.000 Intergenic Intergenic -28467 NM_001347971 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr22-2616 chr22 32459718 32459928 + 9.43 0.000 Intergenic AluJb|SINE|Alu -2437 NM_174932 254240 Hs.372939 NM_174932 ENSG00000184459 BPIFC BPIL2 BPI fold containing family C protein-coding chr1-10619 chr1 179127264 179127474 + 9.43 0.000 intron (NM_007314, intron 3 of 11) intron (NM_007314, intron 3 of 11) 15707 NM_001136000 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr11-3720 chr11 14449419 14449629 + 9.43 0.000 Intergenic Intergenic 50334 NM_016451 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr13-3411 chr13 97978851 97979061 + 9.43 0.000 intron (NM_002271, intron 4 of 28) intron (NM_002271, intron 4 of 28) 25281 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr11-1580 chr11 128509317 128509527 + 9.43 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 12888 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr6-8136 chr6 129321120 129321330 + 9.43 0.000 intron (NM_000426, intron 28 of 64) intron (NM_000426, intron 28 of 64) 388952 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chrX-3626 chrX 87496805 87497015 + 9.43 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -20892 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr5-2463 chr5 137666283 137666493 + 9.43 0.000 intron (NM_017415, intron 6 of 14) L2b|LINE|L2 -18739 NR_030588 100126343 NR_030588 ENSG00000216009 MIR874 MIRN874|hsa-mir-874|mir-874 microRNA 874 ncRNA chr15-2326 chr15 86088454 86088664 + 9.43 0.000 intron (NR_120368, intron 3 of 5) intron (NR_120368, intron 3 of 5) 8939 NM_152336 123624 Hs.31795 NM_152336 ENSG00000273540 AGBL1 CCP4|FECD8 ATP/GTP binding protein like 1 protein-coding chr17-4886 chr17 68383968 68384178 + 9.43 0.000 intron (NM_001352899, intron 8 of 12) intron (NM_001352899, intron 8 of 12) -29550 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr7-8910 chr7 94001290 94001500 + 9.43 0.000 intron (NR_133908, intron 1 of 6) intron (NR_133908, intron 1 of 6) 2960 NM_001317739 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr10-7087 chr10 92618149 92618359 + 9.43 0.000 intron (NM_004523, intron 9 of 21) L1MB8|LINE|L1 25124 NM_004523 3832 Hs.8878 NM_004523 ENSG00000138160 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding chr13-829 chr13 46894073 46894283 + 9.43 0.000 intron (NM_001165947, intron 1 of 2) intron (NM_001165947, intron 1 of 2) 2898 NM_000621 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr22-2716 chr22 38306176 38306386 + 9.43 0.000 intron (NM_001894, intron 2 of 10) intron (NM_001894, intron 2 of 10) 11152 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr6-5010 chr6 109313561 109313771 + 9.43 0.000 intron (NR_152435, intron 32 of 45) intron (NR_152435, intron 32 of 45) 68073 NM_001346500 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr12-2367 chr12 14770078 14770288 + 9.43 0.000 TTS (NM_175054) TTS (NM_175054) 948 NM_175054 121504 Hs.745457 NM_175054 ENSG00000197837 HIST4H4 H4/p histone cluster 4 H4 protein-coding chr11-6631 chr11 74620551 74620761 + 9.43 0.000 intron (NM_001363597, intron 7 of 11) intron (NM_001363597, intron 7 of 11) 28074 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr2-14348 chr2 218364226 218364436 + 9.43 0.000 intron (NM_001320865, intron 6 of 9) intron (NM_001320865, intron 6 of 9) 3571 NR_110573 101928513 Hs.512386 NR_110573 ENSG00000225062 CATIP-AS1 - CATIP antisense RNA 1 ncRNA chr3-3382 chr3 49746055 49746265 + 9.43 0.000 intron (NM_001006115, intron 1 of 4) L1MB4|LINE|L1 -22186 NM_013334 29925 Hs.567488 NM_013334 ENSG00000173540 GMPPB LGMDR19|MDDGA14|MDDGB14|MDDGC14 GDP-mannose pyrophosphorylase B protein-coding chr16-6615 chr16 67628508 67628718 + 9.43 0.000 intron (NM_006565, intron 9 of 11) intron (NM_006565, intron 9 of 11) -16531 NM_001013838 146206 Hs.611432 NM_001013838 ENSG00000159753 CARMIL2 CARMIL2b|IMD58|LRRC16C|RLTPR capping protein regulator and myosin 1 linker 2 protein-coding chr20-2820 chr20 59155968 59156178 + 9.43 0.000 Intergenic L1MA10|LINE|L1 -34947 NM_178457 128611 Hs.473204 NM_178457 ENSG00000124203 ZNF831 C20orf174 zinc finger protein 831 protein-coding chr6-4496 chr6 37058302 37058512 + 9.43 0.000 Intergenic L2a|LINE|L2 52752 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr17-4821 chr17 55466811 55467021 + 9.43 0.000 Intergenic Intergenic -45081 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr16-6819 chr16 80927596 80927806 + 9.43 0.000 Intergenic L2a|LINE|L2 -35105 NR_131947 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA chr1-5899 chr1 8869354 8869564 + 9.43 0.000 intron (NM_001353346, intron 4 of 11) intron (NM_001353346, intron 4 of 11) -2869 NR_106786 102465436 NR_106786 ENSG00000274258 MIR6728 hsa-mir-6728 microRNA 6728 ncRNA chr17-3995 chr17 68186027 68186237 + 9.43 0.000 Intergenic MER89-int|LTR|ERV1 -12528 NR_027283 440461 Hs.661522 NR_027283 ARHGAP27P2 - Rho GTPase activating protein 27 pseudogene 2 pseudo chr16-6855 chr16 82996119 82996329 + 9.43 0.000 intron (NM_001220490, intron 2 of 12) intron (NM_001220490, intron 2 of 12) -5926 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr14-3087 chr14 64142272 64142482 + 9.43 0.000 intron (NM_015180, intron 82 of 114) L2c|LINE|L2 -47252 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA chr13-1823 chr13 66072433 66072643 + 9.43 0.000 Intergenic MER41C|LTR|ERV1 -106109 NR_039692 100616302 NR_039692 ENSG00000263581 MIR548X2 - microRNA 548x-2 ncRNA chrX-5055 chrX 123739957 123740167 + 9.43 0.000 Intergenic LTR33|LTR|ERVL -7010 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr9-6361 chr9 17998138 17998348 + 9.43 0.000 Intergenic Intergenic 419177 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr11-3990 chr11 2525671 2525881 + 9.43 0.000 intron (NM_181798, intron 1 of 15) intron (NM_181798, intron 1 of 15) 64322 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr3-5684 chr3 13534355 13534565 + 9.43 0.000 Intergenic Intergenic -14665 NM_001998 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chrX-2596 chrX 105753175 105753385 + 9.43 0.000 intron (NM_017416, intron 9 of 10) L2a|LINE|L2 -69259 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr15-1505 chr15 50352361 50352571 + 9.43 0.000 non-coding (NR_026891, exon 1 of 1) non-coding (NR_026891, exon 1 of 1) -1708 NR_024490 100129387 Hs.659360 NR_024490 GABPB1-AS1 - GABPB1 antisense RNA 1 ncRNA chr7-2725 chr7 37973991 37974201 + 9.43 0.000 Intergenic Intergenic 52777 NM_001242948 54749 Hs.563491 NM_017549 ENSG00000086289 EPDR1 EPDR|MERP-1|MERP1|UCC1 ependymin related 1 protein-coding chr1-14914 chr1 84164759 84164969 + 9.43 0.000 5' UTR (NM_001242860, exon 1 of 13) 5' UTR (NM_001242860, exon 1 of 13) 170 NM_001300915 5567 Hs.487325 NM_002731 ENSG00000142875 PRKACB PKA C-beta|PKACB protein kinase cAMP-activated catalytic subunit beta protein-coding chr10-3513 chr10 71250938 71251148 + 9.43 0.000 intron (NM_001244889, intron 1 of 15) MER117|DNA|hAT-Charlie -32815 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chrX-2951 chrX 154306456 154306666 + 9.43 0.000 intron (NM_001145934, intron 1 of 11) intron (NM_001145934, intron 1 of 11) 1504 NM_001145934 8277 Hs.102866 NM_012253 ENSG00000007350 TKTL1 TKR|TKT2 transketolase like 1 protein-coding chr2-9344 chr2 226489890 226490100 + 9.43 0.000 Intergenic MamTip2|DNA|hAT-Tip100 168798 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr18-1957 chr18 37296753 37296963 + 9.43 0.000 intron (NM_001353741, intron 3 of 13) intron (NM_001353741, intron 3 of 13) 22398 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr8-5239 chr8 127418997 127419207 + 9.43 0.000 intron (NR_117100, intron 5 of 5) intron (NR_117100, intron 5 of 5) 3277 NM_001159542 5462 Hs.450254 NM_001159542 ENSG00000212993 POU5F1B OCT4-PG1|OCT4PG1|OTF3C|OTF3P1|POU5F1P1|POU5F1P4|POU5FLC20|POU5FLC8 POU class 5 homeobox 1B protein-coding chr19-4903 chr19 41810700 41810910 + 9.43 0.000 intron (NM_001815, intron 5 of 6) intron (NM_001815, intron 5 of 6) 14218 NR_102333 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr3-6235 chr3 66630651 66630861 + 9.43 0.000 Intergenic Intergenic 107580 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr10-7946 chr10 53781913 53782123 + 9.43 0.000 Intergenic Intergenic -704212 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr9-2716 chr9 89687285 89687495 + 9.43 0.000 intron (NR_024280, intron 3 of 5) intron (NR_024280, intron 3 of 5) 47607 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr6-4792 chr6 77447275 77447485 + 9.43 0.000 Intergenic L2a|LINE|L2 16642 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr5-8388 chr5 124438190 124438400 + 9.43 0.000 intron (NR_125774, intron 1 of 5) intron (NR_125774, intron 1 of 5) 225 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr1-9068 chr1 15288190 15288400 + 9.43 0.000 intron (NM_052929, intron 3 of 30) intron (NM_052929, intron 3 of 30) 41070 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr1-10163 chr1 110066643 110066853 + 9.43 0.000 intron (NM_006492, intron 1 of 3) intron (NM_006492, intron 1 of 3) 3924 NM_006492 257 Hs.669953 NM_006492 ENSG00000156150 ALX3 FND|FND1 ALX homeobox 3 protein-coding chrX-3889 chrX 6689945 6690155 + 9.43 0.000 Intergenic LTR12C|LTR|ERV1 -154932 NM_016379 51481 Hs.170076 NM_016379 ENSG00000169059 VCX3A VCX-8r|VCX-A|VCX3|VCX8R|VCXA variable charge X-linked 3A protein-coding chr14-3801 chr14 64891839 64892049 + 9.43 0.000 Intergenic Intergenic -12037 NM_001355436 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr1-6489 chr1 22255112 22255322 + 9.43 0.000 Intergenic Intergenic -11022 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr7-1805 chr7 100569259 100569469 + 9.43 0.000 Intergenic Intergenic 4536 NM_001348677 100316904 Hs.633863 NM_001168682 ENSG00000205307 SAP25 - Sin3A associated protein 25 protein-coding chr10-4935 chr10 24787788 24787998 + 9.43 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -64006 NM_020824 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr2-11511 chr2 237820503 237820713 + 9.43 0.000 intron (NM_001080504, intron 5 of 15) intron (NM_001080504, intron 5 of 15) 21863 NM_001080504 375316 Hs.607265 NM_198852 ENSG00000177483 RBM44 - RNA binding motif protein 44 protein-coding chr1-5748 chr1 109242455 109242665 + 9.43 0.000 Intergenic L2c|LINE|L2 -6979 NM_001408 1952 Hs.57652 NM_001408 ENSG00000143126 CELSR2 ADGRC2|CDHF10|EGFL2|Flamingo1|MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 protein-coding chr3-4365 chr3 185630834 185631044 + 9.43 0.000 3' UTR (NM_021627, exon 17 of 17) 3' UTR (NM_021627, exon 17 of 17) 44644 NM_021627 59343 Hs.401388 NM_021627 ENSG00000163904 SENP2 AXAM2|SMT3IP2 SUMO specific peptidase 2 protein-coding chr1-12602 chr1 35727171 35727381 + 9.43 0.000 intron (NM_001330490, intron 24 of 24) LTR16A|LTR|ERVL -8392 NM_152374 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr16-4556 chr16 66563222 66563432 + 9.43 0.000 intron (NM_001204098, intron 2 of 3) intron (NM_001204098, intron 2 of 3) -3112 NM_052999 113540 Hs.15159 NM_052999 ENSG00000089505 CMTM1 CKLFH|CKLFH1|CKLFSF1 CKLF like MARVEL transmembrane domain containing 1 protein-coding chr5-3745 chr5 39635497 39635707 + 9.43 0.000 Intergenic MLT2B2|LTR|ERVL 115171 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr22-1749 chr22 24333388 24333598 + 9.43 0.000 intron (NM_015330, intron 8 of 16) intron (NM_015330, intron 8 of 16) -8615 NM_001254733 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr4-3860 chr4 130840031 130840241 + 9.43 0.000 Intergenic L1ME3A|LINE|L1 463775 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr6-4772 chr6 73971798 73972008 + 9.43 0.000 Intergenic L1P3|LINE|L1 -97548 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr7-6154 chr7 125629157 125629367 + 9.43 0.000 Intergenic Intergenic -364971 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr8-4463 chr8 116457791 116458001 + 9.43 0.000 Intergenic Intergenic -132837 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr6-4959 chr6 104103860 104104070 + 9.43 0.000 Intergenic L1ME3|LINE|L1 755581 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr9-5598 chr9 114697241 114697451 + 9.43 0.000 Intergenic Intergenic -15257 NR_144867 100505478 Hs.200101 NM_001199233 ENSG00000230601 TEX48 - testis expressed 48 protein-coding chr12-4124 chr12 66769351 66769561 + 9.43 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) 34813 NM_001366723 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr1-7179 chr1 209806287 209806497 + 9.43 0.000 promoter-TSS (NM_001206696) promoter-TSS (NM_001206696) -217 NM_001206696 3664 Hs.591415 NM_006147 ENSG00000117595 IRF6 LPS|OFC6|PIT|PPS|PPS1|VWS|VWS1 interferon regulatory factor 6 protein-coding chr14-3919 chr14 102035444 102035654 + 9.43 0.000 intron (NM_001376, intron 56 of 77) L1ME4b|LINE|L1 51495 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr15-1263 chr15 82709632 82709842 + 9.43 0.000 TTS (NR_034139) TTS (NR_034139) 138 NM_004644 8120 Hs.199593 NM_004644 ENSG00000103723 AP3B2 EIEE48|NAPTB adaptor related protein complex 3 subunit beta 2 protein-coding chr6-8598 chr6 167034437 167034647 + 9.43 0.000 intron (NM_001278690, intron 10 of 10) intron (NM_001278690, intron 10 of 10) 35145 NM_194429 11116 Hs.487175 NM_007045 ENSG00000213066 FGFR1OP FOP FGFR1 oncogene partner protein-coding chr11-8762 chr11 9211000 9211210 + 9.43 0.000 intron (NR_145966, intron 1 of 21) L1MEf|LINE|L1 54221 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr18-2617 chr18 30054245 30054455 + 9.43 0.000 Intergenic Intergenic -244560 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr3-6538 chr3 118769779 118769989 + 9.43 0.000 intron (NR_135547, intron 1 of 3) intron (NR_135547, intron 1 of 3) 40949 NR_135547 105374060 Hs.99062 NR_135547 LOC105374060 - uncharacterized LOC105374060 ncRNA chr5-4617 chr5 32351786 32351996 + 9.43 0.000 Intergenic MER5A|DNA|hAT-Charlie -38952 NM_001294344 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr19-6635 chr19 31942176 31942386 + 9.43 0.000 Intergenic MIRb|SINE|MIR -83581 NR_110674 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA chr7-2552 chr7 94466705 94466915 + 9.43 0.000 Intergenic Intergenic -42999 NM_001363427 64921 Hs.260041 NM_022900 ENSG00000127995 CASD1 C7orf12|NBLA04196|SOAT CAS1 domain containing 1 protein-coding chr2-4012 chr2 100018971 100019181 + 9.43 0.000 intron (NM_001025108, intron 2 of 23) intron (NM_001025108, intron 2 of 23) 86507 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr2-12430 chr2 57498226 57498436 + 9.43 0.000 Intergenic Intergenic -409320 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr2-8474 chr2 125683090 125683300 + 9.43 0.000 Intergenic MIR|SINE|MIR 434790 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr6-4598 chr6 44071800 44072010 + 9.43 0.000 intron (NR_125864, intron 1 of 4) Tigger15a|DNA|TcMar-Tigger 2747 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr7-5640 chr7 54745986 54746196 + 9.43 0.000 Intergenic L2|LINE|L2 13120 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr4-1787 chr4 3317328 3317538 + 9.43 0.000 exon (NM_198229, exon 2 of 18) exon (NM_198229, exon 2 of 18) 3286 NM_002926 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr3-5424 chr3 169545188 169545398 + 9.43 0.000 intron (NM_001366473, intron 1 of 15) intron (NM_001366473, intron 1 of 15) 97426 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr3-5652 chr3 11592529 11592739 + 9.43 0.000 intron (NM_001128219, intron 2 of 4) intron (NM_001128219, intron 2 of 4) -10278 NM_001128220 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr17-5164 chr17 9648252 9648462 + 9.43 0.000 intron (NM_001267576, intron 1 of 14) L2c|LINE|L2 2820 NM_001267576 124739 Hs.709621 NM_153210 ENSG00000154914 USP43 - ubiquitin specific peptidase 43 protein-coding chr3-9059 chr3 25004968 25005178 + 9.43 0.000 intron (NM_001290216, intron 2 of 10) L2a|LINE|L2 175750 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr6-2950 chr6 35428115 35428325 + 9.43 0.000 TTS (NM_001171819) TTS (NM_001171819) -24141 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr5-5095 chr5 98755486 98755696 + 9.43 0.000 Intergenic Intergenic -13041 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr8-1758 chr8 30800646 30800856 + 9.43 0.000 intron (NM_001009552, intron 1 of 6) Tigger15a|DNA|TcMar-Tigger 12067 NM_001009552 5516 Hs.491440 NM_004156 ENSG00000104695 PPP2CB PP2Abeta|PP2CB protein phosphatase 2 catalytic subunit beta protein-coding chr4-6422 chr4 129735317 129735527 + 9.43 0.000 intron (NR_110753, intron 3 of 4) intron (NR_110753, intron 3 of 4) 36056 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr1-1813 chr1 203305800 203306010 + 9.43 0.000 promoter-TSS (NR_034150) promoter-TSS (NR_034150) 386 NM_006763 7832 Hs.519162 NM_006763 ENSG00000159388 BTG2 APRO1|PC3|TIS21 BTG anti-proliferation factor 2 protein-coding chr2-13779 chr2 172119028 172119238 + 9.43 0.000 Intergenic MER119|DNA|hAT-Charlie 16127 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr17-3951 chr17 62601513 62601723 + 9.43 0.000 intron (NM_001284363, intron 16 of 19) intron (NM_001284363, intron 16 of 19) -26052 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr18-1223 chr18 42028171 42028381 + 9.43 0.000 intron (NM_001308020, intron 13 of 23) intron (NM_001308020, intron 13 of 23) 73042 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr19-3522 chr19 42042614 42042824 + 9.43 0.000 exon (NM_001301030, exon 11 of 19) exon (NM_001301030, exon 11 of 19) 23086 NM_002088 2901 Hs.367799 NM_002088 ENSG00000105737 GRIK5 EAA2|GRIK2|GluK5|KA2 glutamate ionotropic receptor kainate type subunit 5 protein-coding chr21-1029 chr21 23335908 23336118 + 9.43 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 48822 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA chr15-4552 chr15 57316245 57316455 + 9.43 0.000 Intergenic L1MC1|LINE|L1 -2788 NR_120337 101928611 Hs.569495 NR_120337 LINC01413 - long intergenic non-protein coding RNA 1413 ncRNA chr13-3926 chr13 58325248 58325458 + 9.43 0.000 Intergenic Intergenic -92236 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr15-4328 chr15 40194418 40194628 + 9.43 0.000 intron (NM_001211, intron 8 of 22) MER5A|DNA|hAT-Charlie -22905 NM_001128629 106821730 Hs.732375 NM_001128628 ENSG00000259288 BUB1B-PAK6 PAK-5|PAK-6|PAK5|PAK6 BUB1B-PAK6 readthrough protein-coding chr10-6214 chr10 45120763 45120973 + 9.43 0.000 intron (NR_024472, intron 5 of 8) intron (NR_024472, intron 5 of 8) 33728 NR_024472 100133308 Hs.434365 NR_024472 RSU1P2 - Ras suppressor protein 1 pseudogene 2 pseudo chr5-6431 chr5 157290601 157290811 + 9.43 0.000 intron (NM_001291721, intron 3 of 29) intron (NM_001291721, intron 3 of 29) 21382 NM_014376 26999 Hs.519702 NM_014376 ENSG00000055163 CYFIP2 EIEE65|PIR121 cytoplasmic FMR1 interacting protein 2 protein-coding chr8-2225 chr8 23278508 23278718 + 9.43 0.000 Intergenic AluJb|SINE|Alu -9479 NR_125897 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chrX-5256 chrX 138440304 138440514 + 9.43 0.000 Intergenic Intergenic 227384 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr6-4741 chr6 68782502 68782712 + 9.43 0.000 intron (NM_001704, intron 3 of 31) L1PA4|LINE|L1 147325 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr1-12149 chr1 176805847 176806057 + 9.43 0.000 intron (NM_020318, intron 21 of 22) AluJr|SINE|Alu 223493 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr11-2590 chr11 125457951 125458161 + 9.43 0.000 intron (NM_005103, intron 5 of 9) intron (NM_005103, intron 5 of 9) -37158 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr2-14458 chr2 223668331 223668541 + 9.43 0.000 Intergenic THE1B|LTR|ERVL-MaLR -66075 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr8-5426 chr8 33597086 33597296 + 9.43 0.000 intron (NM_001305115, intron 2 of 3) intron (NM_001305115, intron 2 of 3) 606 NM_001305116 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr13-1254 chr13 102700567 102700777 + 9.43 0.000 Intergenic Intergenic -6151 NM_001010977 196541 Hs.508623 NM_001010977 ENSG00000139780 METTL21C C13orf39 methyltransferase like 21C protein-coding chr1-8503 chr1 151858361 151858571 + 9.43 0.000 Intergenic MER63A|DNA|hAT-Blackjack -4754 NM_182578 284486 Hs.132648 NM_182578 ENSG00000196407 THEM5 ACOT15 thioesterase superfamily member 5 protein-coding chr11-5974 chr11 18783479 18783689 + 9.43 0.000 intron (NM_006906, intron 1 of 14) MIRb|SINE|MIR 8214 NM_001039970 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr5-5723 chr5 168793901 168794111 + 9.43 0.000 intron (NM_003062, intron 10 of 35) intron (NM_003062, intron 10 of 35) -25751 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr2-14211 chr2 209135804 209136014 + 9.43 0.000 Intergenic Intergenic -288138 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr7-4105 chr7 42889124 42889334 + 9.43 0.000 Intergenic Intergenic 22614 NM_001363436 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr17-7036 chr17 60346971 60347181 + 9.43 0.000 intron (NM_032582, intron 1 of 33) intron (NM_032582, intron 1 of 33) 45057 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr8-1245 chr8 124727876 124728086 + 9.43 0.000 5' UTR (NM_001363302, exon 1 of 13) 5' UTR (NM_001363302, exon 1 of 13) 492 NM_001363299 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr5-5615 chr5 153562360 153562570 + 9.43 0.000 intron (NM_001258020, intron 3 of 16) intron (NM_001258020, intron 3 of 16) 70293 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr1-5053 chr1 93976489 93976699 + 9.43 0.000 Intergenic Intergenic -66996 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr1-4860 chr1 29883276 29883486 + 9.43 0.000 Intergenic MIR|SINE|MIR 154231 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr7-7352 chr7 53917630 53917840 + 9.43 0.000 Intergenic Intergenic -105804 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr8-2706 chr8 96944774 96944984 + 9.43 0.000 intron (NM_016134, intron 4 of 7) intron (NM_016134, intron 4 of 7) 299637 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr17-7759 chr17 34841150 34841360 + 9.43 0.000 Intergenic MIRb|SINE|MIR 120205 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr2-4966 chr2 191449425 191449635 + 9.43 0.000 Intergenic L1MC4|LINE|L1 204126 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr8-6365 chr8 53172882 53173092 + 9.43 0.000 Intergenic Intergenic 78650 NM_000912 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr10-2378 chr10 101774201 101774411 + 9.43 0.000 intron (NM_033165, intron 3 of 4) intron (NM_033165, intron 3 of 4) 1808 NM_033163 2253 Hs.57710 NM_006119 ENSG00000107831 FGF8 AIGF|FGF-8|HBGF-8|HH6|KAL6 fibroblast growth factor 8 protein-coding chr8-3832 chr8 30197409 30197619 + 9.43 0.000 Intergenic L1MB5|LINE|L1 41145 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr17-4885 chr17 68171752 68171962 + 9.43 0.000 Intergenic L1ME1|LINE|L1 -26803 NR_027283 440461 Hs.661522 NR_027283 ARHGAP27P2 - Rho GTPase activating protein 27 pseudogene 2 pseudo chr11-2610 chr11 291525 291735 + 9.43 0.000 intron (NM_025092, intron 4 of 13) intron (NM_025092, intron 4 of 13) 2504 NM_025092 80162 Hs.353181 NM_025092 ENSG00000142102 PGGHG ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase protein-coding chr3-8630 chr3 171337291 171337501 + 9.43 0.000 intron (NM_001161563, intron 2 of 31) intron (NM_001161563, intron 2 of 31) 123009 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr17-7499 chr17 16852730 16852940 + 9.43 0.000 Intergenic LTR14A|LTR|ERVK -6963 NR_146392 147228 Hs.565076 NM_001349721 KRT17P1 - keratin 17 pseudogene 1 pseudo chr1-3450 chr1 27027099 27027309 + 9.43 0.000 Intergenic L2a|LINE|L2 -14354 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr14-3425 chr14 96884938 96885148 + 9.43 0.000 Intergenic Intergenic -58536 NR_104113 145249 Hs.592323 NR_104113 ENSG00000225163 LINC00618 C14orf63 long intergenic non-protein coding RNA 618 ncRNA chr1-4585 chr1 110091699 110091909 + 9.43 0.000 intron (NR_126382, intron 1 of 3) intron (NR_126382, intron 1 of 3) 9116 NR_126382 104355139 Hs.628193 NR_126382 ENSG00000258673 LINC01397 - long intergenic non-protein coding RNA 1397 ncRNA chr13-1178 chr13 40915354 40915564 + 9.43 0.000 intron (NR_003365, intron 2 of 2) L2|LINE|L2 6291 NR_038258 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo chr1-14053 chr1 28399443 28399653 + 9.43 0.000 intron (NM_001350160, intron 2 of 14) Charlie29a|DNA|hAT-Charlie 29808 NM_001350161 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr17-4410 chr17 39069302 39069512 + 9.43 0.000 intron (NM_020405, intron 13 of 13) intron (NM_020405, intron 13 of 13) 12388 NR_036551 100131347 Hs.676510 NR_036551 ENSG00000263818 RDM1P5 - RDM1 pseudogene 5 pseudo chr11-4229 chr11 64345197 64345407 + 9.43 0.000 intron (NM_032251, intron 14 of 26) intron (NM_032251, intron 14 of 26) -3398 NR_106977 102466815 NR_106977 ENSG00000278359 MIR7155 hsa-mir-7155 microRNA 7155 ncRNA chr2-9151 chr2 211454494 211454704 + 9.43 0.000 intron (NM_001042599, intron 20 of 26) intron (NM_001042599, intron 20 of 26) 837028 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr8-2242 chr8 37361333 37361543 + 9.43 0.000 Intergenic Intergenic 132475 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr16-3819 chr16 55085624 55085834 + 9.43 0.000 Intergenic L2a|LINE|L2 154530 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr12-5753 chr12 213107 213317 + 9.43 0.000 intron (NM_001122848, intron 1 of 15) intron (NM_001122848, intron 1 of 15) 490 NM_003044 6539 Hs.437174 NM_003044 ENSG00000111181 SLC6A12 BGT-1|BGT1|GAT2 solute carrier family 6 member 12 protein-coding chr1-8204 chr1 23840185 23840395 + 9.43 0.000 Intergenic AluSx4|SINE|Alu -14831 NM_001166059 3155 Hs.533444 NM_000191 ENSG00000117305 HMGCL HL 3-hydroxy-3-methylglutaryl-CoA lyase protein-coding chr6-5419 chr6 156503055 156503265 + 9.43 0.000 Intergenic Intergenic 124410 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr7-5991 chr7 102718491 102718701 + 9.43 0.000 intron (NR_146066, intron 1 of 11) intron (NR_146066, intron 1 of 11) 30098 NR_146066 100133005 NR_146066 RASA4DP - RAS p21 protein activator 4CD, pseudogene pseudo chr20-2808 chr20 57485053 57485263 + 9.43 0.000 Intergenic Intergenic 39709 NR_072975 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr17-3874 chr17 49132897 49133107 + 9.43 0.000 5' UTR (NM_153446, exon 1 of 11) 5' UTR (NM_153446, exon 1 of 11) 233 NM_153446 124872 Hs.374679 NM_153446 ENSG00000167080 B4GALNT2 B4GALT|GALGT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 protein-coding chr7-7037 chr7 134927271 134927481 + 9.43 0.000 intron (NM_033139, intron 1 of 12) AluJb|SINE|Alu 35918 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr22-2146 chr22 39981079 39981289 + 9.43 0.000 Intergenic Intergenic -13770 NM_138435 113828 Hs.26192 NM_138435 ENSG00000133477 FAM83F - family with sequence similarity 83 member F protein-coding chr1-4917 chr1 41851689 41851899 + 9.43 0.000 intron (NR_038261, intron 2 of 3) intron (NR_038261, intron 2 of 3) 67128 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr10-8632 chr10 98264385 98264595 + 9.43 0.000 intron (NM_032211, intron 1 of 14) intron (NM_032211, intron 1 of 14) 3704 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr13-2013 chr13 37447844 37448054 + 9.43 0.000 Intergenic MIR3|SINE|MIR 36835 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chr3-1710 chr3 52514674 52514884 + 9.43 0.000 exon (NM_015136, exon 35 of 69) exon (NM_015136, exon 35 of 69) 19078 NM_001134231 64943 Hs.84753 NM_022908 ENSG00000168268 NT5DC2 - 5'-nucleotidase domain containing 2 protein-coding chr1-10598 chr1 176886759 176886969 + 9.43 0.000 intron (NM_207108, intron 18 of 21) intron (NM_207108, intron 18 of 21) 142581 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr3-5062 chr3 42080836 42081046 + 9.43 0.000 Intergenic AluJb|SINE|Alu -6259 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr11-7544 chr11 15733219 15733429 + 9.43 0.000 Intergenic Intergenic 89439 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr1-8318 chr1 48450608 48450818 + 9.43 0.000 intron (NM_019073, intron 3 of 12) intron (NM_019073, intron 3 of 12) 21491 NM_001286238 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr7-8185 chr7 31099143 31099353 + 9.43 0.000 intron (NM_001199637, intron 11 of 13) intron (NM_001199637, intron 11 of 13) 46787 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr18-3490 chr18 72705826 72706036 + 9.43 0.000 Intergenic L1MDa|LINE|L1 147451 NR_049858 100847083 NR_049858 ENSG00000263750 MIR548AV - microRNA 548av ncRNA chr16-3914 chr16 83015847 83016057 + 9.43 0.000 intron (NM_001220490, intron 2 of 12) intron (NM_001220490, intron 2 of 12) -25654 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr8-1945 chr8 52432887 52433097 + 9.43 0.000 Intergenic MIR|SINE|MIR -23113 NM_001352838 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr16-4346 chr16 31334088 31334298 + 9.43 0.000 Intergenic MIRb|SINE|MIR -20983 NM_001286375 3687 Hs.248472 NM_000887 ENSG00000140678 ITGAX CD11C|SLEB6 integrin subunit alpha X protein-coding chr5-2064 chr5 136893361 136893571 + 9.43 0.000 Intergenic L1ME3B|LINE|L1 -234731 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr10-5353 chr10 72126255 72126465 + 9.43 0.000 intron (NM_001369103, intron 8 of 9) intron (NM_001369103, intron 8 of 9) -37328 NM_001134434 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr11-8391 chr11 93476583 93476793 + 9.43 0.000 Intergenic MIR|SINE|MIR 66703 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr22-1065 chr22 20109922 20110132 + 9.43 0.000 exon (NM_001190326, exon 13 of 13) exon (NM_001190326, exon 13 of 13) 4724 NR_106874 102465490 NR_106874 ENSG00000278278 MIR6816 hsa-mir-6816 microRNA 6816 ncRNA chr4-6711 chr4 3756494 3756704 + 9.43 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -9786 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr14-3361 chr14 91351263 91351473 + 9.43 0.000 intron (NM_001080414, intron 4 of 29) intron (NM_001080414, intron 4 of 29) 66452 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr5-5215 chr5 115112528 115112738 + 9.43 0.000 Intergenic Intergenic 57275 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr1-8356 chr1 60266354 60266564 + 9.43 0.000 Intergenic Intergenic -192689 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr4-4032 chr4 2222985 2223195 + 9.43 0.000 intron (NM_181808, intron 3 of 25) LTR16|LTR|ERVL 19031 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr15-1356 chr15 66761762 66761972 + 9.43 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 59631 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr17-5598 chr17 48136285 48136495 + 9.43 0.000 intron (NM_001075099, intron 12 of 12) AluSx3|SINE|Alu 20121 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr22-1404 chr22 39697356 39697566 + 9.43 0.000 Intergenic Intergenic 126708 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chrX-5281 chrX 140716485 140716695 + 9.43 0.000 intron (NR_104228, intron 2 of 3) intron (NR_104228, intron 2 of 3) 6831 NR_104228 286411 Hs.317627 NR_028344 ENSG00000203930 LINC00632 ASINC long intergenic non-protein coding RNA 632 ncRNA chr16-3803 chr16 47552901 47553111 + 9.43 0.000 intron (NM_001031835, intron 8 of 31) L1P3|LINE|L1 91675 NM_001031835 5257 Hs.78060 NM_000293 ENSG00000102893 PHKB - phosphorylase kinase regulatory subunit beta protein-coding chrX-423 chrX 41086250 41086460 + 9.43 0.000 intron (NM_001039591, intron 1 of 44) CpG-29609 910 NM_001039591 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr8-3993 chr8 53587418 53587628 + 9.43 0.000 Intergenic Intergenic -63558 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr16-5694 chr16 75417412 75417622 + 9.43 0.000 intron (NM_006324, intron 1 of 6) L1MC5a|LINE|L1 15986 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr2-14557 chr2 230927782 230927992 + 9.43 0.000 Intergenic Intergenic -2645 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr1-7884 chr1 116504626 116504836 + 9.43 0.000 Intergenic Intergenic -25905 NR_125973 101929023 Hs.668091 NR_125972 ENSG00000233154 LINC01762 - long intergenic non-protein coding RNA 1762 ncRNA chr2-11718 chr2 10367519 10367729 + 9.43 0.000 intron (NM_001258357, intron 1 of 4) intron (NM_001258357, intron 1 of 4) -1054 NM_001258358 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr7-3834 chr7 99674323 99674533 + 9.43 0.000 intron (NR_033807, intron 3 of 12) MER65A|LTR|ERV1 5568 NM_000777 1577 Hs.571258 NM_000777 ENSG00000106258 CYP3A5 CP35|CYPIIIA5|P450PCN3|PCN3 cytochrome P450 family 3 subfamily A member 5 protein-coding chr18-1767 chr18 9985540 9985750 + 9.43 0.000 Intergenic Intergenic 71629 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr2-7194 chr2 213416072 213416282 + 9.43 0.000 intron (NR_047660, intron 8 of 14) intron (NR_047660, intron 8 of 14) 131713 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr14-2938 chr14 45085104 45085314 + 9.43 0.000 intron (NM_017922, intron 1 of 13) intron (NM_017922, intron 1 of 13) 1093 NM_017922 55015 Hs.274337 NM_017922 ENSG00000185246 PRPF39 - pre-mRNA processing factor 39 protein-coding chr2-4756 chr2 15079532 15079742 + 9.43 0.000 Intergenic Intergenic 446920 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr17-4714 chr17 31463074 31463284 + 9.43 0.000 intron (NM_032932, intron 3 of 14) intron (NM_032932, intron 3 of 14) -24929 NM_001346748 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr1-11181 chr1 240391167 240391377 + 9.43 0.000 intron (NM_020066, intron 14 of 17) intron (NM_020066, intron 14 of 17) 220883 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr4-3283 chr4 139041652 139041862 + 9.43 0.000 intron (NM_012118, intron 1 of 2) intron (NM_012118, intron 1 of 2) 25976 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr9-1431 chr9 133113458 133113668 + 9.43 0.000 intron (NM_001042368, intron 1 of 17) (ACCCAC)n|Simple_repeat|Simple_repeat 7677 NM_001271776 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr5-7652 chr5 52773586 52773796 + 9.43 0.000 Intergenic Intergenic -14225 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr1-6628 chr1 43601723 43601933 + 9.43 0.000 intron (NM_001329140, intron 12 of 30) intron (NM_001329140, intron 12 of 30) -48321 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr22-2265 chr22 31311501 31311711 + 9.43 0.000 Intergenic Intergenic -19072 NM_001135911 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr1-4229 chr1 172909675 172909885 + 9.43 0.000 Intergenic Intergenic 141183 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr1-7524 chr1 162133788 162133998 + 9.43 0.000 intron (NM_014697, intron 1 of 9) intron (NM_014697, intron 1 of 9) -23214 NR_039798 100616386 NR_039798 ENSG00000266144 MIR4654 mir-4654 microRNA 4654 ncRNA chr12-7698 chr12 90279496 90279706 + 9.43 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -13717 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr3-2812 chr3 11453307 11453517 + 9.43 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 115386 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr5-8535 chr5 134969326 134969536 + 9.43 0.000 intron (NM_178019, intron 1 of 7) L1ME4a|LINE|L1 1524 NM_178019 347732 Hs.631804 NM_178019 ENSG00000152705 CATSPER3 CACRC cation channel sperm associated 3 protein-coding chr4-1358 chr4 7676596 7676806 + 9.43 0.000 intron (NM_020777, intron 9 of 26) (TC)n|Simple_repeat|Simple_repeat -77389 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr4-4897 chr4 121510250 121510460 + 9.43 0.000 Intergenic Intergenic -129337 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr7-4808 chr7 94860605 94860815 + 9.43 0.000 Intergenic MER54A|LTR|ERVL -46884 NM_001166160 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr11-6715 chr11 79652084 79652294 + 9.43 0.000 Intergenic Charlie4z|DNA|hAT-Charlie -211159 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr1-3791 chr1 10252539 10252749 + 9.43 0.000 intron (NM_001365953, intron 2 of 20) AluJb|SINE|Alu 21880 NM_001365953 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr4-6742 chr4 5184930 5185140 + 9.43 0.000 intron (NM_001306082, intron 4 of 12) intron (NM_001306082, intron 4 of 12) 133555 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr13-2476 chr13 51010952 51011162 + 9.43 0.000 intron (NR_003923, intron 12 of 16) L1ME2|LINE|L1 55100 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr1-3134 chr1 58250140 58250350 + 9.43 0.000 5' UTR (NM_021080, exon 1 of 17) 5' UTR (NM_021080, exon 1 of 17) 258 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr3-10925 chr3 173147128 173147338 + 9.43 0.000 Intergenic L1M1|LINE|L1 -5998 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr22-2461 chr22 20372558 20372768 + 9.43 0.000 Intergenic L1M3de|LINE|L1 -21452 NM_001256524 7625 Hs.517418 NM_003426 ENSG00000185252 ZNF74 COS52|ZFP520|ZNF520|hZNF7 zinc finger protein 74 protein-coding chr1-14896 chr1 82553710 82553920 + 9.43 0.000 Intergenic Intergenic -349368 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr10-3756 chr10 122140970 122141180 + 9.43 0.000 intron (NM_001291876, intron 6 of 19) intron (NM_001291876, intron 6 of 19) -22555 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr5-3497 chr5 173789039 173789249 + 9.43 0.000 intron (NR_108028, intron 2 of 3) intron (NR_108028, intron 2 of 3) 1798 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr11-6062 chr11 31849985 31850195 + 9.43 0.000 intron (NR_033971, intron 1 of 2) intron (NR_033971, intron 1 of 2) 23523 NR_117094 103157000 NR_117094 ENSG00000281880 PAUPAR - PAX6 upstream antisense RNA ncRNA chr20-4074 chr20 38797157 38797367 + 9.43 0.000 Intergenic L1MC4|LINE|L1 -8435 NM_015568 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr8-3342 chr8 39516610 39516820 + 9.43 0.000 intron (NR_073423, intron 1 of 21) L1MA9|LINE|L1 6274 NR_024106 1587 Hs.98848 NR_001569 ENSG00000197475 ADAM3A ADAM3|CYRN1|tMDCI ADAM metallopeptidase domain 3A (pseudogene) pseudo chr6-2827 chr6 160972306 160972516 + 9.43 0.000 Intergenic Intergenic -19316 NM_001291958 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr20-1054 chr20 3785657 3785867 + 9.43 0.000 exon (NM_001810, exon 1 of 1) exon (NM_001810, exon 1 of 1) 978 NM_001810 1059 Hs.516855 NM_001810 ENSG00000125817 CENPB - centromere protein B protein-coding chr3-10613 chr3 145298507 145298717 + 9.43 0.000 Intergenic Intergenic 770573 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr21-1147 chr21 40991986 40992196 + 9.43 0.000 Intergenic Intergenic -144933 NM_001271534 1826 Hs.160418 NM_001389 ENSG00000171587 DSCAM CHD2|CHD2-42|CHD2-52 DS cell adhesion molecule protein-coding chr21-610 chr21 29092567 29092777 + 9.43 0.000 intron (NM_001286634, intron 5 of 7) intron (NM_001286634, intron 5 of 7) 418 NM_001286619 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr14-2542 chr14 22449294 22449504 + 9.43 0.000 intron (NR_148361, intron 2 of 4) intron (NR_148361, intron 2 of 4) -16646 NR_148363 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr12-1812 chr12 6810729 6810939 + 9.43 0.000 intron (NM_000616, intron 3 of 9) intron (NM_000616, intron 3 of 9) -10987 NM_019858 27239 Hs.631654 NM_014449 ENSG00000250510 GPR162 A-2|GRCA G protein-coupled receptor 162 protein-coding chr2-6352 chr2 95752337 95752547 + 9.43 0.000 Intergenic Intergenic 74539 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr4-3871 chr4 138603367 138603577 + 9.43 0.000 Intergenic L2b|LINE|L2 293761 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr13-2725 chr13 94763216 94763426 + 9.43 0.000 intron (NR_110754, intron 1 of 4) intron (NR_110754, intron 1 of 4) 2380 NR_110754 101927284 Hs.551673 NR_110754 LOC101927284 - uncharacterized LOC101927284 ncRNA chr8-5954 chr8 20341134 20341344 + 9.43 0.000 Intergenic Intergenic -37276 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr20-2122 chr20 34083566 34083776 + 9.43 0.000 3' UTR (NM_016732, exon 10 of 10) 3' UTR (NM_016732, exon 10 of 10) 28572 NM_001316364 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr11-3192 chr11 64935867 64936077 + 9.43 0.000 promoter-TSS (NM_130769) promoter-TSS (NM_130769) -79 NM_130769 170589 Hs.436119 NM_130769 ENSG00000149735 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone subunit alpha 2 protein-coding chr19-4448 chr19 4674898 4675108 + 9.43 0.000 TTS (NR_158699) TTS (NR_158699) -4279 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr10-3123 chr10 38069229 38069439 + 9.43 0.000 Intergenic Intergenic -25002 NM_001007094 7587 Hs.292575 NM_003421 ENSG00000075407 ZNF37A KOX21|ZNF37 zinc finger protein 37A protein-coding chr4-2434 chr4 145937230 145937440 + 9.43 0.000 intron (NM_178835, intron 1 of 14) CpG 1488 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr22-1824 chr22 36522598 36522808 + 9.43 0.000 intron (NR_156418, intron 6 of 14) MSTB2|LTR|ERVL-MaLR 6463 NR_156418 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr17-5206 chr17 15902027 15902237 + 9.43 0.000 Intergenic L1MB3|LINE|L1 -42785 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr21-1338 chr21 29557213 29557423 + 9.43 0.000 intron (NM_000830, intron 15 of 16) MIRc|SINE|MIR -38722 NR_033368 100379661 Hs.659368 NR_033368 ENSG00000156273 GRIK1-AS2 C21orf41|NCRNA00258 GRIK1 antisense RNA 2 ncRNA chr4-5696 chr4 29814371 29814581 + 9.43 0.000 Intergenic L1MEb|LINE|L1 600184 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr6-3773 chr6 16961611 16961821 + 9.43 0.000 Intergenic Intergenic -140542 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr22-1268 chr22 28904589 28904799 + 9.43 0.000 intron (NM_001206998, intron 1 of 8) intron (NM_001206998, intron 1 of 8) -12695 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr11-6116 chr11 37484555 37484765 + 9.43 0.000 Intergenic Intergenic -453941 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr10-4392 chr10 50029651 50029861 + 9.43 0.000 intron (NR_038275, intron 6 of 6) intron (NR_038275, intron 6 of 6) 38047 NR_038275 100421577 Hs.712902 NR_038275 ENSG00000235618 FAM21EP - family with sequence similarity 21, member A pseudogene pseudo chr9-8457 chr9 122918077 122918287 + 9.43 0.000 3' UTR (NM_020924, exon 2 of 2) 3' UTR (NM_020924, exon 2 of 2) -4859 NM_006626 10773 Hs.654596 NM_006626 ENSG00000186130 ZBTB6 ZID|ZNF482 zinc finger and BTB domain containing 6 protein-coding chr5-6093 chr5 14749603 14749813 + 9.43 0.000 intron (NM_054027, intron 5 of 11) intron (NM_054027, intron 5 of 11) 37014 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr6-4402 chr6 26164884 26165094 + 9.43 0.000 intron (NM_138720, intron 1 of 1) intron (NM_138720, intron 1 of 1) 6868 NM_138720 3017 Hs.591797 NM_021063 ENSG00000158373 HIST1H2BD H2B.1B|H2B/a|H2B/b|H2B/g|H2B/h|H2B/k|H2B/l|H2BFA|H2BFB|H2BFG|H2BFH|H2BFK|H2BFL|HIRIP2|HIST1H2BC|HIST1H2BE|HIST1H2BF|HIST1H2BG|HIST1H2BI|dJ221C16.6 histone cluster 1 H2B family member d protein-coding chr2-5171 chr2 30084426 30084636 + 9.43 0.000 Intergenic L2|LINE|L2 -62476 NM_016061 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr19-3364 chr19 11052507 11052717 + 9.43 0.000 intron (NM_001128846, intron 28 of 32) intron (NM_001128846, intron 28 of 32) -36750 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr17-1967 chr17 15502795 15503005 + 9.43 0.000 exon (NM_145301, exon 6 of 6) exon (NM_145301, exon 6 of 6) -32064 NR_146601 94145 Hs.697356 NR_146601 CDRT3 - CMT1A duplicated region transcript 3 ncRNA chr1-7527 chr1 168113032 168113242 + 9.43 0.000 intron (NM_001267611, intron 1 of 5) intron (NM_001267611, intron 1 of 5) 23299 NM_001267612 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr2-8631 chr2 144523717 144523927 + 9.43 0.000 non-coding (NR_136320, exon 2 of 2) non-coding (NR_136320, exon 2 of 2) 622 NR_136320 105373656 Hs.734683 NR_136320 LOC105373656 - uncharacterized LOC105373656 ncRNA chr16-2791 chr16 50627694 50627904 + 9.43 0.000 intron (NM_033119, intron 6 of 9) intron (NM_033119, intron 6 of 9) -41056 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr8-2643 chr8 69654059 69654269 + 9.43 0.000 intron (NR_132437, intron 16 of 16) MER21-int|LTR|ERVL 61264 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr19-4871 chr19 39546534 39546744 + 9.43 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -6478 NM_153232 163126 Hs.18949 NM_153232 ENSG00000176396 EID2 CRI2|EID-2 EP300 interacting inhibitor of differentiation 2 protein-coding chrX-2528 chrX 97903221 97903431 + 9.43 0.000 Intergenic HAL1|LINE|L1 -338791 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr22-4103 chr22 43503908 43504118 + 9.43 0.000 intron (NM_001362786, intron 6 of 6) intron (NM_001362786, intron 6 of 6) -12241 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr12-6259 chr12 43054475 43054685 + 9.43 0.000 Intergenic Intergenic -100735 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr12-1037 chr12 62684164 62684374 + 9.43 0.000 intron (NM_020700, intron 8 of 9) intron (NM_020700, intron 8 of 9) 80583 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr11-6539 chr11 69842220 69842430 + 9.43 0.000 Intergenic MIR|SINE|MIR -22909 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr13-2362 chr13 38688256 38688466 + 9.43 0.000 exon (NM_207361, exon 1 of 24) exon (NM_207361, exon 1 of 24) 1284 NM_207361 341640 Hs.253994 NM_207361 ENSG00000150893 FREM2 CRYPTOP|FRASRS2 FRAS1 related extracellular matrix 2 protein-coding chr6-5613 chr6 44305669 44305879 + 9.43 0.000 exon (NM_020745, exon 10 of 22) exon (NM_020745, exon 10 of 22) 7573 NM_020745 57505 Hs.158381 NM_020745 ENSG00000124608 AARS2 AARSL|COXPD8|LKENP|MT-ALARS|MTALARS alanyl-tRNA synthetase 2, mitochondrial protein-coding chr14-3019 chr14 54840097 54840307 + 9.43 0.000 Intergenic Intergenic 37991 NR_036194 100422984 NR_036194 ENSG00000265432 MIR4308 - microRNA 4308 ncRNA chr5-5635 chr5 155276864 155277074 + 9.43 0.000 Intergenic Intergenic 263214 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr6-5980 chr6 88299202 88299412 + 9.43 0.000 Intergenic Intergenic -131958 NM_001370546 1268 Hs.75110 NM_016083 ENSG00000118432 CNR1 CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR cannabinoid receptor 1 protein-coding chr13-3072 chr13 41451452 41451662 + 9.43 0.000 Intergenic SATR2|Satellite|Satellite -5993 NM_014059 28984 Hs.507866 NM_014059 ENSG00000102760 RGCC C13orf15|RGC-32|RGC32|bA157L14.2 regulator of cell cycle protein-coding chr15-2852 chr15 40958277 40958487 + 9.43 0.000 Intergenic Intergenic 4911 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr4-4650 chr4 82367765 82367975 + 9.43 0.000 intron (NM_001003810, intron 1 of 6) intron (NM_001003810, intron 1 of 6) 6121 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr1-7761 chr1 37310456 37310666 + 9.43 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 148998 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr14-2793 chr14 21156832 21157042 + 9.43 0.000 promoter-TSS (NM_001004731) promoter-TSS (NM_001004731) -874 NM_001004731 390445 Hs.553768 NM_001004731 ENSG00000169327 OR5AU1 OR14-38 olfactory receptor family 5 subfamily AU member 1 protein-coding chr15-1726 chr15 26891411 26891621 + 9.43 0.000 intron (NM_001165037, intron 6 of 10) intron (NM_001165037, intron 6 of 10) 24390 NM_001165037 2558 Hs.24969 NM_000810 ENSG00000186297 GABRA5 - gamma-aminobutyric acid type A receptor alpha5 subunit protein-coding chr2-8629 chr2 144504208 144504418 + 9.43 0.000 intron (NM_001171653, intron 2 of 8) intron (NM_001171653, intron 2 of 8) -15301 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chr4-2324 chr4 140573194 140573404 + 9.43 0.000 Intergenic L1ME4c|LINE|L1 -4338 NM_021833 7350 Hs.249211 NM_021833 ENSG00000109424 UCP1 SLC25A7|UCP uncoupling protein 1 protein-coding chr14-4676 chr14 56050876 56051086 + 9.43 0.000 Intergenic Intergenic -67430 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr4-6811 chr4 7869285 7869495 + 9.43 0.000 intron (NM_198595, intron 2 of 16) intron (NM_198595, intron 2 of 16) 2918 NM_001371090 chr8-4750 chr8 142747394 142747604 + 9.43 0.000 Intergenic Intergenic 5033 NM_205545 137797 Hs.441280 NM_205545 ENSG00000197353 LYPD2 LYPDC2|UNQ430 LY6/PLAUR domain containing 2 protein-coding chr10-2245 chr10 96858424 96858634 + 9.43 0.000 intron (NM_001170766, intron 2 of 8) intron (NM_001170766, intron 2 of 8) 25584 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chrX-1659 chrX 147993518 147993728 + 9.43 0.000 intron (NM_152578, intron 1 of 5) intron (NM_152578, intron 1 of 5) 12286 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr14-3190 chr14 72181289 72181499 + 9.43 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 247867 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr3-7208 chr3 191434947 191435157 + 9.43 0.000 intron (NR_120606, intron 1 of 6) intron (NR_120606, intron 1 of 6) 9528 NR_120606 103344926 NR_120606 LINCR-0002 - uncharacterized LincR-0002 ncRNA chr2-6919 chr2 106766759 106766969 + 9.43 0.000 Intergenic LTR80A|LTR|ERVL 119164 NR_136313 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr7-6042 chr7 110573917 110574127 + 9.43 0.000 Intergenic MER67D|LTR|ERV1 -516984 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr3-2217 chr3 30437285 30437495 + 9.43 0.000 Intergenic Intergenic -81478 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr15-2665 chr15 76946972 76947182 + 9.43 0.000 intron (NM_001271837, intron 5 of 7) intron (NM_001271837, intron 5 of 7) 15328 NM_001271837 5955 Hs.79088 NM_002902 ENSG00000117906 RCN2 E6BP|ERC-55|ERC55|TCBP49 reticulocalbin 2 protein-coding chr2-13474 chr2 146946675 146946885 + 9.43 0.000 Intergenic L1PA14|LINE|L1 359723 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr10-5789 chr10 105613021 105613231 + 9.43 0.000 Intergenic Intergenic 207207 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr4-1992 chr4 864844 865054 + 9.43 0.000 intron (NM_005255, intron 23 of 27) intron (NM_005255, intron 23 of 27) -38820 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr4-5792 chr4 80374669 80374879 + 9.43 0.000 intron (NM_152770, intron 2 of 5) ERV3-16A3_I-int|LTR|ERVL 39054 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr15-4329 chr15 40243281 40243491 + 9.43 0.000 intron (NM_020168, intron 2 of 10) MIR|SINE|MIR 3589 NM_020168 56924 Hs.732375 NM_020168 ENSG00000137843 PAK6 PAK5 p21 (RAC1) activated kinase 6 protein-coding chr5-5440 chr5 138131518 138131728 + 9.43 0.000 intron (NM_003551, intron 2 of 5) intron (NM_003551, intron 2 of 5) 7805 NM_003551 8382 Hs.730856 NM_003551 ENSG00000112981 NME5 NM23-H5|NM23H5|RSPH23 NME/NM23 family member 5 protein-coding chr5-5194 chr5 112417806 112418016 + 9.43 0.000 intron (NM_001347887, intron 1 of 23) intron (NM_001347887, intron 1 of 23) 1366 NM_022140 64097 Hs.584954 NM_022140 ENSG00000129595 EPB41L4A EPB41L4|NBL4 erythrocyte membrane protein band 4.1 like 4A protein-coding chr6-5409 chr6 155240948 155241158 + 9.43 0.000 intron (NM_001010927, intron 2 of 12) intron (NM_001010927, intron 2 of 12) -22960 NM_001001346 49861 Hs.567491 NM_001001346 ENSG00000171217 CLDN20 - claudin 20 protein-coding chr22-841 chr22 44736728 44736938 + 9.43 0.000 exon (NM_015366, exon 9 of 9) exon (NM_015366, exon 9 of 9) -15725 NM_001017526 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr4-4107 chr4 6355094 6355304 + 9.43 0.000 intron (NM_001206994, intron 6 of 9) L2a|LINE|L2 26669 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chrX-2546 chrX 99980948 99981158 + 9.43 0.000 Intergenic L2c|LINE|L2 429220 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr5-6777 chr5 89421109 89421319 + 9.43 0.000 intron (NR_136221, intron 5 of 6) intron (NR_136221, intron 5 of 6) -517109 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr2-8100 chr2 76579435 76579645 + 9.43 0.000 Intergenic LTR7|LTR|ERV1 -406425 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr9-6184 chr9 89400904 89401114 + 9.43 0.000 intron (NM_001371200, intron 6 of 20) intron (NM_001371200, intron 6 of 20) 78881 NR_163888 chr6-2493 chr6 100176488 100176698 + 9.43 0.000 Intergenic Intergenic -182355 NM_032503 84539 Hs.591342 NM_032503 ENSG00000152034 MCHR2 GPR145|GPRv17|MCH-2R|MCH-R2|MCH2|MCH2R|MCHR-2|SLT melanin concentrating hormone receptor 2 protein-coding chr16-3761 chr16 26691867 26692077 + 9.43 0.000 Intergenic L2a|LINE|L2 -374955 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr15-5000 chr15 80749692 80749902 + 9.43 0.000 intron (NM_021214, intron 2 of 2) L2b|LINE|L2 -29573 NM_001293298 57214 Hs.459088 NM_018689 ENSG00000103888 CEMIP CCSP1|HYBID|KIAA1199|TMEM2L cell migration inducing hyaluronidase 1 protein-coding chr1-9902 chr1 70211738 70211948 + 9.43 0.000 intron (NM_001190987, intron 1 of 12) intron (NM_001190987, intron 1 of 12) 6147 NM_001190987 9295 Hs.479693 NM_004768 ENSG00000116754 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine and arginine rich splicing factor 11 protein-coding chr13-3393 chr13 91034113 91034323 + 9.43 0.000 Intergenic AluJb|SINE|Alu 55399 NR_104057 101930747 Hs.112745 NR_104057 LINC00380 - long intergenic non-protein coding RNA 380 ncRNA chr5-4416 chr5 408134 408344 + 9.43 0.000 intron (NM_020731, intron 4 of 11) L1M5|LINE|L1 34921 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr9-2971 chr9 15936254 15936464 + 9.43 0.000 intron (NM_001355547, intron 24 of 24) intron (NM_001355547, intron 24 of 24) 316748 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr11-5762 chr11 3811699 3811909 + 9.43 0.000 intron (NR_045926, intron 3 of 5) intron (NR_045926, intron 3 of 5) 3244 NR_144428 27315 Hs.133968 NM_014489 ENSG00000148985 PGAP2 CWH43-N|FRAG1|HPMRS3|MRT17|MRT21 post-GPI attachment to proteins 2 protein-coding chrX-2899 chrX 149949997 149950207 + 9.43 0.000 intron (NR_027456, intron 7 of 11) MER68B|LTR|ERVL 11554 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr18-922 chr18 67600302 67600512 + 9.43 0.000 intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) -83687 NM_032160 92126 Hs.124673 NM_032160 ENSG00000171451 DSEL C18orf4|DE-epi2 dermatan sulfate epimerase like protein-coding chr9-5720 chr9 125841589 125841799 + 9.43 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 93511 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr4-3531 chr4 163085313 163085523 + 9.43 0.000 Intergenic LTR16|LTR|ERVL 8210 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr10-2967 chr10 70117391 70117601 + 9.43 0.000 intron (NM_001198696, intron 6 of 8) intron (NM_001198696, intron 6 of 8) 15329 NM_032797 84883 Hs.650680 NM_032797 ENSG00000042286 AIFM2 AMID|PRG3 apoptosis inducing factor mitochondria associated 2 protein-coding chr18-598 chr18 50072432 50072642 + 9.43 0.000 intron (NM_001080467, intron 1 of 39) intron (NM_001080467, intron 1 of 39) 54026 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr10-3448 chr10 47378548 47378758 + 9.43 0.000 intron (NM_001346932, intron 2 of 3) intron (NM_001346932, intron 2 of 3) 5640 NM_001346934 118738 Hs.27788 NM_153034 ENSG00000265763 ZNF488 - zinc finger protein 488 protein-coding chr5-3448 chr5 159533128 159533338 + 9.43 0.000 Intergenic Intergenic -66957 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr12-2608 chr12 122853109 122853319 + 9.43 0.000 intron (NM_003959, intron 7 of 31) intron (NM_003959, intron 7 of 31) 17757 NM_001303097 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr4-2479 chr4 7253825 7254035 + 9.43 0.000 intron (NM_020777, intron 1 of 26) L1PB4|LINE|L1 -56520 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr10-5931 chr10 120477664 120477874 + 9.43 0.000 intron (NR_134516, intron 2 of 4) L2b|LINE|L2 20815 NM_001030059 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr11-4996 chr11 72844309 72844519 + 9.43 0.000 intron (NM_014824, intron 14 of 19) intron (NM_014824, intron 14 of 19) 30003 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr6-3987 chr6 112298993 112299203 + 9.43 0.000 intron (NR_121193, intron 2 of 2) intron (NR_121193, intron 2 of 2) -44383 NM_001105208 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr9-3702 chr9 108824523 108824733 + 9.43 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 31358 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr9-5588 chr9 114028712 114028922 + 9.43 0.000 exon (NM_001318040, exon 10 of 14) exon (NM_001318040, exon 10 of 14) 49483 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr10-4191 chr10 101564793 101565003 + 9.43 0.000 Intergenic Intergenic 23359 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr17-3258 chr17 31158767 31158977 + 9.43 0.000 intron (NM_001042492, intron 2 of 57) intron (NM_001042492, intron 2 of 57) 63895 NM_001128147 4763 Hs.113577 NM_000267 ENSG00000196712 NF1 NFNS|VRNF|WSS neurofibromin 1 protein-coding chr2-7517 chr2 20562112 20562322 + 9.43 0.000 Intergenic AluJr|SINE|Alu 30331 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr15-4628 chr15 62406269 62406479 + 9.43 0.000 Intergenic MER66B|LTR|ERV1 63345 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr6-5288 chr6 140043367 140043577 + 9.43 0.000 intron (NR_121623, intron 1 of 1) AmnSINE1|SINE|5S-Deu-L2 -52211 NR_121624 103352541 Hs.582647 NR_121624 LOC103352541 - uncharacterized LOC103352541 ncRNA chr18-986 chr18 10378240 10378450 + 9.43 0.000 Intergenic Intergenic 36025 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr10-8902 chr10 114562057 114562267 + 9.43 0.000 intron (NM_001352440, intron 4 of 20) intron (NM_001352440, intron 4 of 20) -35249 NM_001322899 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr18-2665 chr18 51911045 51911255 + 9.43 0.000 Intergenic Intergenic -429047 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr22-1534 chr22 26661483 26661693 + 9.43 0.000 intron (NR_033319, intron 1 of 3) MIRb|SINE|MIR 4106 NR_003491 440823 Hs.517502 NR_003491 ENSG00000225783 MIAT C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2|lncRNA-MIAT myocardial infarction associated transcript ncRNA chr7-5269 chr7 21551616 21551826 + 9.43 0.000 intron (NM_001277115, intron 2 of 81) HERVP71A-int|LTR|ERV1 8682 NM_001277115 8701 Hs.520245 NM_001277115 ENSG00000105877 DNAH11 CILD7|DNAHBL|DNAHC11|DNHBL|DPL11 dynein axonemal heavy chain 11 protein-coding chr11-5111 chr11 122642550 122642760 + 9.43 0.000 Intergenic Intergenic -13067 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr6-3205 chr6 133131034 133131244 + 9.43 0.000 Intergenic Intergenic 43059 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr1-16136 chr1 205229660 205229870 + 9.43 0.000 intron (NM_001242925, intron 1 of 4) intron (NM_001242925, intron 1 of 4) 834 NM_001242925 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr6-4927 chr6 98560404 98560614 + 9.43 0.000 Intergenic Intergenic 271191 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr10-4238 chr10 126646182 126646392 + 9.43 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) 24223 NM_001350922 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr17-6487 chr17 21373134 21373344 + 9.43 0.000 Intergenic Intergenic -3118 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chrX-1157 chrX 44416340 44416550 + 9.43 0.000 Intergenic L1M1|LINE|L1 -72773 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr20-1769 chr20 51507343 51507553 + 9.43 0.000 intron (NM_012340, intron 3 of 10) intron (NM_012340, intron 3 of 10) 35271 NM_012340 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr22-2541 chr22 25887045 25887255 + 9.43 0.000 intron (NM_001318245, intron 25 of 43) intron (NM_001318245, intron 25 of 43) 144962 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr10-5870 chr10 115562594 115562804 + 9.43 0.000 intron (NM_207303, intron 26 of 28) THE1C|LTR|ERVL-MaLR 469334 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr17-3693 chr17 16145067 16145277 + 9.43 0.000 intron (NM_001190440, intron 9 of 44) SVA_B|Retroposon|SVA 8024 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr4-7073 chr4 31318477 31318687 + 9.43 0.000 Intergenic HERV16-int|LTR|ERVL 147438 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA chr15-2795 chr15 35913815 35914025 + 9.43 0.000 Intergenic Intergenic -12936 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr8-4265 chr8 93880387 93880597 + 9.43 0.000 Intergenic Intergenic 35627 NR_039602 100616169 NR_039602 ENSG00000284288 MIR378D2 mir-378d-2 microRNA 378d-2 ncRNA chr7-5454 chr7 39420090 39420300 + 9.43 0.000 intron (NM_001370959, intron 6 of 9) intron (NM_001370959, intron 6 of 9) -13849 NR_046711 100861520 Hs.571292 NR_046711 ENSG00000224122 POU6F2-AS1 - POU6F2 antisense RNA 1 ncRNA chr16-4524 chr16 61917658 61917868 + 9.43 0.000 intron (NM_001796, intron 2 of 11) intron (NM_001796, intron 2 of 11) 118675 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr11-7876 chr11 122443639 122443849 + 9.43 0.000 Intergenic Intergenic -20873 NR_137179 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr5-5034 chr5 86797744 86797954 + 9.43 0.000 Intergenic LTR79|LTR|ERVL 51031 NR_105017 100505878 Hs.246405 NR_105017 LINC02059 - long intergenic non-protein coding RNA 2059 ncRNA chr19-2328 chr19 37984579 37984789 + 9.43 0.000 intron (NM_015073, intron 1 of 21) MIRb|SINE|MIR 77476 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr2-12104 chr2 34189985 34190195 + 9.43 0.000 intron (NR_126403, intron 4 of 5) intron (NR_126403, intron 4 of 5) 122864 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr9-4951 chr9 15808658 15808868 + 9.43 0.000 intron (NM_001355547, intron 20 of 24) L2|LINE|L2 244785 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr3-3984 chr3 54377311 54377521 + 9.43 0.000 intron (NM_018398, intron 3 of 37) intron (NM_018398, intron 3 of 37) 254864 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr10-3753 chr10 121989440 121989650 + 9.43 0.000 intron (NM_206862, intron 1 of 22) intron (NM_206862, intron 1 of 22) 382 NM_206862 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr16-1957 chr16 65178192 65178402 + 9.43 0.000 Intergenic Intergenic -1724 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr7-8546 chr7 55904167 55904377 + 9.43 0.000 intron (NM_182633, intron 1 of 6) AluSz|SINE|Alu 16816 NM_182633 349075 Hs.660834 NM_182633 ENSG00000178665 ZNF713 - zinc finger protein 713 protein-coding chr2-3825 chr2 26532417 26532627 + 9.43 0.000 intron (NM_194248, intron 2 of 46) L2b|LINE|L2 26234 NM_001287489 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr8-1845 chr8 143929533 143929743 + 9.43 0.000 intron (NM_201379, intron 23 of 31) CpG 9959 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr18-1140 chr18 7982735 7982945 + 9.43 0.000 intron (NM_002845, intron 7 of 30) Tigger3b|DNA|TcMar-Tigger 384194 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr1-9979 chr1 81617764 81617974 + 9.43 0.000 intron (NM_001366008, intron 3 of 26) intron (NM_001366008, intron 3 of 26) -60167 NR_125943 101927434 Hs.130394 NR_125943 ENSG00000234953 LOC101927434 - uncharacterized LOC101927434 ncRNA chr17-8585 chr17 80396677 80396887 + 9.43 0.000 3' UTR (NM_001256071, exon 68 of 68) 3' UTR (NM_001256071, exon 68 of 68) -18385 NM_001164637 284131 Hs.389678 NM_173627 ENSG00000173818 ENDOV - endonuclease V protein-coding chr1-9440 chr1 34361804 34362014 + 9.43 0.000 Intergenic MIRb|SINE|MIR 185002 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr3-7172 chr3 187066423 187066633 + 9.43 0.000 intron (NM_173216, intron 5 of 7) intron (NM_173216, intron 5 of 7) 27810 NM_001353916 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr9-3266 chr9 28234886 28235096 + 9.43 0.000 intron (NM_152570, intron 5 of 6) L1M1|LINE|L1 484314 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr14-2881 chr14 34302684 34302894 + 9.43 0.000 Intergenic Intergenic 159451 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr14-5329 chr14 102431887 102432097 + 9.43 0.000 exon (NM_001172631, exon 8 of 17) exon (NM_001172631, exon 8 of 17) 69051 NM_014844 9895 Hs.195667 NM_014844 ENSG00000196663 TECPR2 KIAA0329|SPG49 tectonin beta-propeller repeat containing 2 protein-coding chr17-3890 chr17 50319079 50319289 + 9.43 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -26942 NM_022167 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr6-5115 chr6 120275182 120275392 + 9.43 0.000 Intergenic ERVL-E-int|LTR|ERVL 260108 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr5-7570 chr5 40447458 40447668 + 9.43 0.000 Intergenic Intergenic -232352 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr10-5528 chr10 85074064 85074274 + 9.43 0.000 Intergenic Intergenic 124736 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr7-3288 chr7 28865431 28865641 + 9.43 0.000 Intergenic Intergenic 92794 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr14-3579 chr14 105499118 105499328 + 9.43 0.000 TTS (NM_001198983) TTS (NM_001198983) 7974 NM_001134876 283643 Hs.720306 NM_173608 ENSG00000185347 TEDC1 C14orf80 tubulin epsilon and delta complex 1 protein-coding chr4-4637 chr4 80986065 80986275 + 9.43 0.000 Intergenic Intergenic -44538 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr4-5057 chr4 142960802 142961012 + 9.43 0.000 Intergenic Intergenic -114372 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr2-8806 chr2 168529984 168530194 + 9.43 0.000 intron (NM_001256126, intron 1 of 10) MamRTE1|LINE|RTE-BovB -52854 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr12-2298 chr12 118136571 118136781 + 9.43 0.000 intron (NM_002567, intron 1 of 3) CpG 552 NM_002567 5037 Hs.433863 NM_002567 ENSG00000089220 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|HEL-S-96|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding chr2-12632 chr2 73154024 73154234 + 9.43 0.000 Intergenic AluSx|SINE|Alu -41181 NM_015470 26056 Hs.24557 NM_015470 ENSG00000135631 RAB11FIP5 GAF1|RIP11|pp75 RAB11 family interacting protein 5 protein-coding chr6-2266 chr6 71388819 71389029 + 9.43 0.000 Intergenic Intergenic -11893 NR_029598 407032 NR_029598 ENSG00000199094 MIR30C2 MIRN30C2|mir-30c-2 microRNA 30c-2 ncRNA chr2-6954 chr2 120786653 120786863 + 9.43 0.000 intron (NM_001371271, intron 1 of 13) intron (NM_001371271, intron 1 of 13) -5523 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr8-7367 chr8 137334845 137335055 + 9.43 0.000 Intergenic Intergenic 78638 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr13-547 chr13 110646823 110647033 + 9.43 0.000 intron (NM_024537, intron 11 of 14) intron (NM_024537, intron 11 of 14) 31344 NM_001242881 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr5-4689 chr5 39057695 39057905 + 9.43 0.000 intron (NM_001285439, intron 2 of 38) intron (NM_001285439, intron 2 of 38) 16599 NM_001285440 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr21-616 chr21 35981582 35981792 + 9.43 0.000 intron (NR_110418, intron 4 of 5) intron (NR_110418, intron 4 of 5) 22980 NR_110418 101928269 Hs.589909 NR_110418 LOC101928269 - uncharacterized LOC101928269 ncRNA chr2-10354 chr2 165483447 165483657 + 9.43 0.000 intron (NM_001172173, intron 1 of 6) intron (NM_001172173, intron 1 of 6) 13854 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chrX-2459 chrX 82306657 82306867 + 9.43 0.000 Intergenic MIR|SINE|MIR 1104660 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr9-1170 chr9 69121572 69121782 + 9.43 0.000 5' UTR (NM_001369870, exon 1 of 24) 5' UTR (NM_001369870, exon 1 of 24) 178 NM_001369870 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr14-3745 chr14 37848625 37848835 + 9.43 0.000 Intergenic Intergenic 53394 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr7-6581 chr7 79091977 79092187 + 9.43 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) 83094 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chrX-2054 chrX 18647533 18647743 + 9.43 0.000 intron (NM_000330, intron 3 of 5) intron (NM_000330, intron 3 of 5) 24465 NM_000330 6247 Hs.715725 NM_000330 ENSG00000102104 RS1 RS|XLRS1 retinoschisin 1 protein-coding chr7-3419 chr7 140656535 140656745 + 9.43 0.000 Intergenic HERV3-int|LTR|ERV1 -15180 NM_001318053 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding chr3-5468 chr3 184746550 184746760 + 9.43 0.000 Intergenic Intergenic 26500 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LINC02069 - long intergenic non-protein coding RNA 2069 ncRNA chr6-2162 chr6 18260686 18260896 + 9.43 0.000 intron (NM_003472, intron 2 of 10) AluJb|SINE|Alu 3739 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr9-5346 chr9 89453185 89453395 + 9.43 0.000 intron (NM_001371200, intron 2 of 20) intron (NM_001371200, intron 2 of 20) 26600 NR_163888 chr7-6021 chr7 106778090 106778300 + 9.43 0.000 Intergenic L2|LINE|L2 -87087 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr2-6409 chr2 131970314 131970524 + 9.43 0.000 Intergenic LTR16A|LTR|ERVL 67481 NR_146485 101928067 NR_146484 LINC01945 - long intergenic non-protein coding RNA 1945 ncRNA chr1-5533 chr1 209411749 209411959 + 9.43 0.000 Intergenic Intergenic -16966 NR_145437 642587 Hs.510543 NR_145433 ENSG00000230937 MIR205HG LINC00510|NPC-A-5 MIR205 host gene ncRNA chr14-2970 chr14 50677353 50677563 + 9.43 0.000 Intergenic Intergenic -9152 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding chr2-7646 chr2 28081255 28081465 + 9.43 0.000 intron (NM_199193, intron 7 of 13) intron (NM_199193, intron 7 of 13) 84993 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA chr3-9938 chr3 89429038 89429248 + 9.43 0.000 exon (NM_005233, exon 12 of 17) exon (NM_005233, exon 12 of 17) 321522 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr5-1901 chr5 159050743 159050953 + 9.43 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 47108 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr16-4189 chr16 11162772 11162982 + 9.43 0.000 intron (NM_015226, intron 21 of 22) intron (NM_015226, intron 21 of 22) 93305 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr7-4617 chr7 24435412 24435622 + 9.43 0.000 Intergenic Intergenic -137935 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr17-5943 chr17 75975947 75976157 + 9.43 0.000 intron (NM_007292, intron 2 of 13) MER104|DNA|TcMar-Tc2 3114 NM_007292 51 Hs.464137 NM_004035 ENSG00000161533 ACOX1 ACOX|PALMCOX|SCOX acyl-CoA oxidase 1 protein-coding chr4-8006 chr4 116517659 116517869 + 9.43 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 218039 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr17-1218 chr17 20993117 20993327 + 9.43 0.000 Intergenic Intergenic 49789 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding chr1-7411 chr1 38937736 38937946 + 9.43 0.000 intron (NM_017821, intron 1 of 7) intron (NM_017821, intron 1 of 7) 3989 NM_017821 54933 Hs.524626 NM_017821 ENSG00000158315 RHBDL2 RRP2 rhomboid like 2 protein-coding chr14-2334 chr14 103088876 103089086 + 9.43 0.000 intron (NM_001330236, intron 3 of 3) AluSx1|SINE|Alu 4771 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chr9-2933 chr9 135722707 135722917 + 9.43 0.000 intron (NM_020822, intron 2 of 30) MLT1A|LTR|ERVL-MaLR 20627 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr8-6534 chr8 68071587 68071797 + 9.43 0.000 intron (NM_024870, intron 13 of 39) intron (NM_024870, intron 13 of 39) 119646 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr2-4686 chr2 218127186 218127396 + 9.43 0.000 intron (NM_001168298, intron 2 of 3) AluSz6|SINE|Alu 1263 NM_001557 3579 Hs.846 NM_001557 ENSG00000180871 CXCR2 CD182|CDw128b|CMKAR2|IL8R2|IL8RA|IL8RB C-X-C motif chemokine receptor 2 protein-coding chr15-2670 chr15 77616275 77616485 + 9.43 0.000 intron (NM_001301195, intron 3 of 3) intron (NM_001301195, intron 3 of 3) 16532 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr15-3814 chr15 74006918 74007128 + 9.43 0.000 intron (NM_033247, intron 2 of 4) MSTB|LTR|ERVL-MaLR 12307 NM_033244 5371 Hs.526464 NM_002675 ENSG00000140464 PML MYL|PP8675|RNF71|TRIM19 promyelocytic leukemia protein-coding chr18-954 chr18 24015587 24015797 + 9.43 0.000 promoter-TSS (NR_110796) promoter-TSS (NR_110796) -232 NR_110796 102724246 Hs.569872 NR_110796 ENSG00000264745 TTC39C-AS1 - TTC39C antisense RNA 1 ncRNA chr19-1996 chr19 12836330 12836540 + 9.43 0.000 Intergenic Intergenic -1007 NM_031429 83546 Hs.21162 NM_031429 ENSG00000132026 RTBDN - retbindin protein-coding chr19-3485 chr19 37874887 37875097 + 9.43 0.000 Intergenic LTR40A1|LTR|ERVL -19796 NR_040015 100631378 Hs.726940 NR_040015 ENSG00000225868 LOC100631378 - uncharacterized 100631378 ncRNA chr1-14947 chr1 87111834 87112044 + 9.43 0.000 Intergenic Intergenic -17826 NR_026989 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr12-3719 chr12 8906302 8906512 + 9.43 0.000 Intergenic AluSz|SINE|Alu -8102 NM_004426 1911 Hs.744902 NM_004426 ENSG00000111752 PHC1 EDR1|HPH1|MCPH11|RAE28 polyhomeotic homolog 1 protein-coding chr5-6842 chr5 115939277 115939487 + 9.43 0.000 Intergenic MER34B|LTR|ERV1 -17189 NR_157226 107986443 NR_157226 LINCADL LINC-ADAL lincRNA adipogenesis and lipogenesis associated ncRNA chr19-1691 chr19 11539897 11540107 + 9.43 0.000 intron (NM_001308341, intron 2 of 7) intron (NM_001308341, intron 2 of 7) 1151 NM_001308342 1264 Hs.465929 NM_001299 ENSG00000130176 CNN1 HEL-S-14|SMCC|Sm-Calp calponin 1 protein-coding chr6-5460 chr6 159002196 159002406 + 9.43 0.000 Intergenic L2a|LINE|L2 -2099 NM_031924 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke head 3 protein-coding chr7-4291 chr7 21870165 21870375 + 9.43 0.000 intron (NM_001277115, intron 73 of 81) intron (NM_001277115, intron 73 of 81) 75629 NM_018719 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr11-2538 chr11 78515637 78515847 + 9.43 0.000 intron (NM_024678, intron 6 of 13) AluJo|SINE|Alu -17434 NR_120566 101928896 Hs.659055 NR_120566 ENSG00000255084 LOC101928896 - uncharacterized LOC101928896 ncRNA chr15-3234 chr15 74053931 74054141 + 9.43 0.000 Intergenic Intergenic 28514 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr10-5802 chr10 108041473 108041683 + 9.43 0.000 intron (NR_125760, intron 2 of 4) intron (NR_125760, intron 2 of 4) 27715 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr15-5122 chr15 89779373 89779583 + 9.43 0.000 TTS (NM_001039958) TTS (NM_001039958) 3146 NM_001039958 145873 Hs.37311 NM_001039958 ENSG00000188095 MESP2 SCDO2|bHLHc6 mesoderm posterior bHLH transcription factor 2 protein-coding chr2-11373 chr2 210336358 210336568 + 9.43 0.000 intron (NR_110606, intron 1 of 4) THE1A|LTR|ERVL-MaLR 11751 NR_110606 102724820 Hs.659232 NR_110604 LANCL1-AS1 LANCLOT LANCL1 antisense RNA 1 ncRNA chr2-12371 chr2 52093307 52093517 + 9.43 0.000 intron (NR_135237, intron 7 of 10) L1M1|LINE|L1 -277236 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr21-1102 chr21 34726608 34726818 + 9.43 0.000 intron (NR_024351, intron 4 of 5) MLT1C|LTR|ERVL-MaLR 10469 NR_024351 54064 Hs.436868 NR_024351 ENSG00000230978 LINC00160 C21orf52|NCRNA00160 long intergenic non-protein coding RNA 160 ncRNA chr1-15921 chr1 186270498 186270708 + 9.43 0.000 Intergenic L1MD1|LINE|L1 -25670 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr7-6311 chr7 140566342 140566552 + 9.43 0.000 intron (NM_001318052, intron 8 of 18) MER41A|LTR|ERV1 36095 NR_134477 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding chr8-6487 chr8 63626378 63626588 + 9.43 0.000 Intergenic Intergenic -142947 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr22-3171 chr22 29716914 29717124 + 9.43 0.000 Intergenic Intergenic -2984 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr5-4772 chr5 54644179 54644389 + 9.43 0.000 Intergenic Intergenic 59040 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr4-2777 chr4 17581267 17581477 + 9.43 0.000 intron (NM_015907, intron 2 of 12) intron (NM_015907, intron 2 of 12) 4068 NM_015907 51056 Hs.570791 NM_015907 ENSG00000002549 LAP3 HEL-S-106|LAP|LAPEP|PEPS leucine aminopeptidase 3 protein-coding chr2-7926 chr2 59304577 59304787 + 9.43 0.000 Intergenic L1MA5A|LINE|L1 86974 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr9-1760 chr9 131739541 131739751 + 9.43 0.000 intron (NM_001304275, intron 1 of 23) CpG 298 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr7-5439 chr7 37908586 37908796 + 9.43 0.000 intron (NM_003014, intron 5 of 5) Tigger15a|DNA|TcMar-Tigger 8126 NM_003014 6424 Hs.658169 NM_003014 ENSG00000106483 SFRP4 FRP-4|FRPHE|FRZB-2|PYL|sFRP-4 secreted frizzled related protein 4 protein-coding chr8-4162 chr8 78167750 78167960 + 9.43 0.000 Intergenic L1MB3|LINE|L1 -348485 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr22-1003 chr22 49560935 49561145 + 9.43 0.000 intron (NR_110523, intron 1 of 4) AluSp|SINE|Alu -17574 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr9-8155 chr9 103983044 103983254 + 9.43 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -16560 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr3-3656 chr3 127441831 127442041 + 9.43 0.000 Intergenic MSTC|LTR|ERVL-MaLR -51266 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr14-971 chr14 69593262 69593472 + 9.43 0.000 Intergenic Intergenic -18229 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr3-8987 chr3 17515803 17516013 + 9.43 0.000 intron (NM_001349091, intron 1 of 19) intron (NM_001349091, intron 1 of 19) 184112 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr6-2451 chr6 12595318 12595528 + 9.43 0.000 Intergenic Intergenic -10019 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr16-4038 chr16 1125149 1125359 + 9.43 0.000 Intergenic Intergenic -27852 NM_021098 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr11-8257 chr11 67652284 67652494 + 9.43 0.000 Intergenic Intergenic -1659 NM_080658 91703 Hs.126265 NM_080658 ENSG00000132744 ACY3 ACY-3|HCBP1 aminoacylase 3 protein-coding chr15-934 chr15 77527427 77527637 + 9.43 0.000 intron (NR_135692, intron 1 of 1) intron (NR_135692, intron 1 of 1) 1937 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr3-1759 chr3 185907481 185907691 + 9.43 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 30428 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr9-5609 chr9 116445862 116446072 + 9.43 0.000 intron (NM_014010, intron 19 of 21) intron (NM_014010, intron 19 of 21) -45361 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr11-10119 chr11 87803754 87803964 + 9.43 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -84448 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr6-4716 chr6 62345102 62345312 + 9.43 0.000 Intergenic L1PA12|LINE|L1 -58980 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr2-6976 chr2 130978336 130978546 + 9.43 0.000 intron (NM_001367493, intron 4 of 13) LOR1-int|LTR|ERV1 114721 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr9-5240 chr9 77751527 77751737 + 9.43 0.000 intron (NM_002072, intron 5 of 6) intron (NM_002072, intron 5 of 6) -103310 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr3-7175 chr3 187359940 187360150 + 9.43 0.000 Intergenic Intergenic -8340 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding chr10-9108 chr10 126788216 126788426 + 9.43 0.000 Intergenic Intergenic -117088 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr7-5362 chr7 30870179 30870389 + 9.43 0.000 intron (NR_037598, intron 15 of 19) intron (NR_037598, intron 15 of 19) -41410 NM_198098 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr12-4518 chr12 24062747 24062957 + 9.43 0.000 intron (NM_152989, intron 4 of 17) MIR1_Amn|SINE|MIR -111820 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr4-4984 chr4 134244241 134244451 + 9.43 0.000 Intergenic MER52D|LTR|ERV1 -42557 NM_001114734 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr5-3301 chr5 121853525 121853735 + 9.43 0.000 TTS (NM_177478) TTS (NM_177478) 1748 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr9-6129 chr9 27095126 27095336 + 9.43 0.000 Intergenic Intergenic -13910 NM_001290078 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr10-4240 chr10 127878150 127878360 + 9.43 0.000 exon (NM_152311, exon 3 of 3) exon (NM_152311, exon 3 of 3) 14686 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chr14-4614 chr14 52758873 52759083 + 9.43 0.000 intron (NM_001130701, intron 9 of 11) intron (NM_001130701, intron 9 of 11) 28812 NM_145251 6815 Hs.364980 NM_145251 ENSG00000198252 STYX - serine/threonine/tyrosine interacting protein protein-coding chr17-3513 chr17 61016010 61016220 + 9.43 0.000 intron (NM_001320470, intron 16 of 25) intron (NM_001320470, intron 16 of 25) 338264 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr11-2708 chr11 123560166 123560376 + 9.43 0.000 promoter-TSS (NM_001286564) promoter-TSS (NM_001286564) 9 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr10-8796 chr10 107305176 107305386 + 9.43 0.000 Intergenic Intergenic -140575 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr18-2923 chr18 13161560 13161770 + 9.43 0.000 Intergenic Intergenic -57095 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr4-5205 chr4 163753853 163754063 + 9.43 0.000 intron (NM_001166373, intron 3 of 7) LTR88a|LTR|Gypsy? -140424 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr14-1984 chr14 49861690 49861900 + 9.43 0.000 TTS (NR_027260) TTS (NR_027260) 1054 NR_027260 378706 NR_027260 ENSG00000274012 RN7SL2 7L1C|7L30.1|7SL1c|RNSRP2 RNA component of signal recognition particle 7SL2 scRNA chr8-1829 chr8 129953078 129953288 + 9.43 0.000 intron (NM_001353256, intron 2 of 13) intron (NM_001353256, intron 2 of 13) -13372 NM_001353266 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr2-2814 chr2 56183723 56183933 + 9.43 0.000 promoter-TSS (NM_001348512) promoter-TSS (NM_001348512) -162 NM_001080433 114800 Hs.117136 NM_001080433 ENSG00000055813 CCDC85A - coiled-coil domain containing 85A protein-coding chr11-6829 chr11 95134610 95134820 + 9.43 0.000 Intergenic Intergenic -15824 NR_110303 101929295 Hs.735838 NR_110303 ENSG00000245552 LOC101929295 - uncharacterized LOC101929295 ncRNA chr3-4272 chr3 152121295 152121505 + 9.43 0.000 Intergenic Intergenic 84029 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr3-3294 chr3 139754737 139754947 + 9.43 0.000 Intergenic Intergenic -76792 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr9-5202 chr9 72813602 72813812 + 9.43 0.000 intron (NM_138691, intron 18 of 23) MER58A|DNA|hAT-Charlie 60402 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr7-5622 chr7 53711725 53711935 + 9.43 0.000 intron (NR_038371, intron 4 of 5) (TG)n|Simple_repeat|Simple_repeat 100101 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chrX-3894 chrX 7339184 7339394 + 9.43 0.000 intron (NM_001320753, intron 9 of 9) intron (NM_001320753, intron 9 of 9) 86816 NM_001320754 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr4-5020 chr4 139651772 139651982 + 9.43 0.000 Intergenic Intergenic -13891 NM_001204367 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr3-10779 chr3 158533329 158533539 + 9.43 0.000 intron (NM_001271838, intron 7 of 9) intron (NM_001271838, intron 7 of 9) 6726 NR_148407 110599565 NR_148407 UC.134 - long non-coding RNA uc.134 ncRNA chr3-6431 chr3 102380113 102380323 + 9.43 0.000 Intergenic Intergenic -54797 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr5-7163 chr5 3606519 3606729 + 9.43 0.000 Intergenic CpG 10792 NM_024337 79192 Hs.424156 NM_024337 ENSG00000170549 IRX1 IRX-5|IRXA1 iroquois homeobox 1 protein-coding chr7-3223 chr7 152573018 152573228 + 9.43 0.000 Intergenic AluSz|SINE|Alu 103018 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr4-4966 chr4 130275155 130275365 + 9.43 0.000 Intergenic Intergenic -101101 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr11-3625 chr11 73349630 73349840 + 9.43 0.000 intron (NM_014786, intron 2 of 20) intron (NM_014786, intron 2 of 20) -26664 NM_152222 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr4-2249 chr4 159206594 159206804 + 9.43 0.000 intron (NM_001351724, intron 3 of 30) intron (NM_001351724, intron 3 of 30) -20933 NM_001351726 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr4-6170 chr4 40899961 40900171 + 9.43 0.000 intron (NM_173075, intron 9 of 16) intron (NM_173075, intron 9 of 16) -42874 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chrX-3268 chrX 94207178 94207388 + 9.43 0.000 Intergenic Intergenic 533077 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr4-8034 chr4 119036041 119036251 + 9.43 0.000 3' UTR (NM_001128933, exon 4 of 4) 3' UTR (NM_001128933, exon 4 of 4) -99638 NM_016599 51778 Hs.732122 NM_016599 ENSG00000172399 MYOZ2 C4orf5|CMH16|CS-1|FATZ-2 myozenin 2 protein-coding chr15-3228 chr15 73789812 73790022 + 9.43 0.000 Intergenic Intergenic 21703 NR_120352 101929221 NR_120352 INSYN1-AS1 C15orf59-AS1 INSYN1 antisense RNA 1 ncRNA chr5-5665 chr5 159179071 159179281 + 9.43 0.000 intron (NM_001199383, intron 4 of 10) intron (NM_001199383, intron 4 of 10) 28472 NM_001199382 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chr21-736 chr21 37871419 37871629 + 9.43 0.000 intron (NM_002240, intron 1 of 3) intron (NM_002240, intron 1 of 3) 44933 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr11-6722 chr11 80090489 80090699 + 9.43 0.000 Intergenic MER30|DNA|hAT-Charlie -649564 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr11-2873 chr11 33371553 33371763 + 9.43 0.000 Intergenic L2b|LINE|L2 -4450 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr10-2731 chr10 112752132 112752342 + 9.43 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -71259 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr5-2365 chr5 80116463 80116673 + 9.43 0.000 intron (NR_126061, intron 11 of 13) intron (NR_126061, intron 11 of 13) -32903 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr2-7054 chr2 161832065 161832275 + 9.43 0.000 intron (NM_001354443, intron 4 of 25) LTR40a|LTR|ERVL 207754 NM_001354455 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr7-9719 chr7 156659988 156660198 + 9.43 0.000 3' UTR (NM_001308274, exon 7 of 7) 3' UTR (NM_001308274, exon 7 of 7) 16292 NM_001308274 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr4-7964 chr4 112234988 112235198 + 9.43 0.000 intron (NM_018569, intron 1 of 9) intron (NM_018569, intron 1 of 9) 3306 NM_018569 55435 Hs.435991 NM_018569 ENSG00000138660 AP1AR 2C18|C4orf16|GBAR|PRO0971|gamma-BAR adaptor related protein complex 1 associated regulatory protein protein-coding chr22-1405 chr22 39961519 39961729 + 9.43 0.000 intron (NM_001291828, intron 2 of 4) intron (NM_001291828, intron 2 of 4) 14807 NM_001291825 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chr1-5158 chr1 162169372 162169582 + 9.43 0.000 intron (NM_014697, intron 2 of 9) intron (NM_014697, intron 2 of 9) 12370 NR_039798 100616386 NR_039798 ENSG00000266144 MIR4654 mir-4654 microRNA 4654 ncRNA chr5-2547 chr5 173969768 173969978 + 9.43 0.000 Intergenic Intergenic -19297 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chr3-6735 chr3 138563824 138564034 + 9.43 0.000 intron (NM_001288967, intron 2 of 13) L1PA7|LINE|L1 28027 NM_001320600 80321 Hs.531962 NM_024491 ENSG00000114107 CEP70 BITE centrosomal protein 70 protein-coding chr14-1349 chr14 95316685 95316895 + 9.43 0.000 intron (NM_024734, intron 1 of 12) intron (NM_024734, intron 1 of 12) 3118 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chrX-2720 chrX 123250064 123250274 + 9.43 0.000 intron (NM_007325, intron 2 of 15) L1ME3F|LINE|L1 65891 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr11-4293 chr11 67309755 67309965 + 9.43 0.000 exon (NM_017857, exon 12 of 14) exon (NM_017857, exon 12 of 14) 6330 NM_017857 54961 Hs.29173 NM_017857 ENSG00000172830 SSH3 SSH3L slingshot protein phosphatase 3 protein-coding chr14-3500 chr14 102936573 102936783 + 9.43 0.000 intron (NM_006035, intron 36 of 36) FLAM_A|SINE|Alu 14022 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr1-6895 chr1 119747202 119747412 + 9.43 0.000 TTS (NM_001166107) TTS (NM_001166107) 21625 NM_001166107 3158 Hs.59889 NM_005518 ENSG00000134240 HMGCS2 - 3-hydroxy-3-methylglutaryl-CoA synthase 2 protein-coding chr6-7751 chr6 92782231 92782441 + 9.43 0.000 Intergenic Intergenic 637223 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr1-10016 chr1 86263275 86263485 + 9.43 0.000 Intergenic L2-3_Crp|LINE|L2 94307 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr3-8105 chr3 16416436 16416646 + 9.43 0.000 intron (NM_015150, intron 3 of 9) L1MD3|LINE|L1 97158 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr12-4180 chr12 92424393 92424603 + 9.43 0.000 intron (NM_001025232, intron 1 of 3) intron (NM_001025232, intron 1 of 3) 2967 NR_027933 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 ncRNA chr2-5609 chr2 182319658 182319868 + 9.43 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) -77700 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr4-7143 chr4 37976102 37976312 + 9.43 0.000 intron (NM_001253912, intron 2 of 20) MLT1F2|LTR|ERVL-MaLR 15809 NM_006607 10744 Hs.668806 NM_006607 ENSG00000250254 PTTG2 - pituitary tumor-transforming 2 protein-coding chr7-8857 chr7 89085552 89085762 + 9.43 0.000 intron (NM_181646, intron 1 of 3) intron (NM_181646, intron 1 of 3) -289920 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr1-6642 chr1 44909743 44909953 + 9.43 0.000 intron (NM_001166588, intron 5 of 9) intron (NM_001166588, intron 5 of 9) -66595 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chrX-3582 chrX 75696809 75697019 + 9.43 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 46165 NR_030737 286495 Hs.567832 NR_030737 TTC3P1 RNF105L|TTC3L tetratricopeptide repeat domain 3 pseudogene 1 pseudo chr3-7416 chr3 108332869 108333079 + 9.43 0.000 intron (NM_001370244, intron 2 of 9) intron (NM_001370244, intron 2 of 9) 21189 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr6-8379 chr6 149868927 149869137 + 9.43 0.000 intron (NR_045126, intron 1 of 1) MLT1O|LTR|ERVL-MaLR -4673 NM_032832 84918 Hs.408355 NM_032832 ENSG00000120256 LRP11 MANSC3|bA350J20.3 LDL receptor related protein 11 protein-coding chr3-8116 chr3 20405933 20406143 + 9.43 0.000 Intergenic Intergenic 63570 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr11-6720 chr11 79881446 79881656 + 9.43 0.000 Intergenic MER91B|DNA|hAT-Tip100 -440521 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr7-4789 chr7 81705190 81705400 + 9.43 0.000 intron (NM_001010932, intron 17 of 17) intron (NM_001010932, intron 17 of 17) -13889 NR_126025 100128317 Hs.571267 NR_126025 ENSG00000233491 LOC100128317 - uncharacterized LOC100128317 ncRNA chr2-7061 chr2 165205374 165205584 + 9.43 0.000 Intergenic MamGypLTR2b|LTR|Gypsy -1429 NM_001081676 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr18-1978 chr18 39381896 39382106 + 9.43 0.000 intron (NR_024391, intron 3 of 3) intron (NR_024391, intron 3 of 3) 240174 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr13-3673 chr13 34038031 34038241 + 9.43 0.000 Intergenic Intergenic 219987 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr17-2097 chr17 81648159 81648369 + 9.43 0.000 non-coding (NR_110866, exon 4 of 4) non-coding (NR_110866, exon 4 of 4) 5450 NM_001365725 5148 Hs.654482 NM_002602 ENSG00000185527 PDE6G PDEG|RP57 phosphodiesterase 6G protein-coding chr2-4395 chr2 61797816 61798026 + 9.43 0.000 Intergenic Intergenic 56139 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr1-4799 chr1 19869948 19870158 + 9.43 0.000 Intergenic Intergenic -12342 NM_015207 23252 Hs.374987 NM_015207 ENSG00000169914 OTUD3 DUBA4 OTU deubiquitinase 3 protein-coding chr4-7252 chr4 46954775 46954985 + 9.43 0.000 intron (NM_001204267, intron 7 of 7) MIRb|SINE|MIR 38701 NM_000809 2557 Hs.248112 NM_000809 ENSG00000109158 GABRA4 - gamma-aminobutyric acid type A receptor alpha4 subunit protein-coding chr11-2324 chr11 68628461 68628671 + 9.43 0.000 Intergenic HERVH-int|LTR|ERV1 -55978 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr3-7095 chr3 180180607 180180817 + 9.43 0.000 Intergenic Intergenic -143775 NM_001349399 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr10-6238 chr10 66663647 66663857 + 9.43 0.000 intron (NM_001127384, intron 9 of 17) intron (NM_001127384, intron 9 of 17) -262284 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr11-6205 chr11 45993475 45993685 + 9.43 0.000 intron (NR_147890, intron 5 of 18) LFSINE_Vert|SINE|tRNA 70924 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr17-5883 chr17 70282697 70282907 + 9.43 0.000 Intergenic Intergenic 113267 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr20-2906 chr20 63621045 63621255 + 9.43 0.000 intron (NM_012384, intron 1 of 9) FRAM|SINE|Alu 5951 NM_012384 26205 Hs.473286 NM_012384 ENSG00000101216 GMEB2 GMEB-2|P79PIF|PIF79 glucocorticoid modulatory element binding protein 2 protein-coding chr17-5837 chr17 66747114 66747324 + 9.43 0.000 intron (NM_002737, intron 13 of 16) AluJr|SINE|Alu -39853 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr1-12292 chr1 233804454 233804664 + 9.43 0.000 Intergenic L1MC2|LINE|L1 -100117 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr7-3267 chr7 11506574 11506784 + 9.43 0.000 intron (NM_015204, intron 6 of 26) L2a|LINE|L2 325519 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr17-5607 chr17 48459776 48459986 + 9.43 0.000 intron (NR_110804, intron 5 of 5) intron (NR_110804, intron 5 of 5) 15048 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 - uncharacterized LOC101927166 ncRNA chr2-11764 chr2 12014294 12014504 + 9.43 0.000 intron (NR_110196, intron 2 of 5) intron (NR_110196, intron 2 of 5) 7283 NR_110196 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr2-6682 chr2 19106264 19106474 + 9.43 0.000 Intergenic Intergenic -79398 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr4-5271 chr4 174164071 174164281 + 9.43 0.000 intron (NR_125896, intron 1 of 4) intron (NR_125896, intron 1 of 4) 56222 NR_125896 101928509 Hs.147719 NR_125896 ENSG00000248174 LINC02268 - long intergenic non-protein coding RNA 2268 ncRNA chr10-2491 chr10 32923233 32923443 + 9.43 0.000 intron (NM_002211, intron 7 of 15) intron (NM_002211, intron 7 of 15) 12220 NM_033668 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr3-4181 chr3 127422209 127422419 + 9.43 0.000 Intergenic MIRb|SINE|MIR -31644 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr8-951 chr8 73746729 73746939 + 9.43 0.000 promoter-TSS (NM_001164380) promoter-TSS (NM_001164380) 6 NM_001164380 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr12-5350 chr12 117075450 117075660 + 9.43 0.000 intron (NR_031766, intron 1 of 7) intron (NR_031766, intron 1 of 7) 23861 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr11-8509 chr11 123386827 123387037 + 9.43 0.000 intron (NM_001367419, intron 1 of 20) intron (NM_001367419, intron 1 of 20) -5420 NR_039714 100616319 NR_039714 ENSG00000265357 MIR4493 - microRNA 4493 ncRNA chr9-5108 chr9 35621677 35621887 + 9.43 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -3369 NM_001782 971 Hs.116481 NM_001782 ENSG00000137101 CD72 CD72b|LYB2 CD72 molecule protein-coding chr22-3102 chr22 49630400 49630610 + 9.43 0.000 intron (NM_001289922, intron 1 of 5) intron (NM_001289922, intron 1 of 5) 27014 NR_110522 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr20-3917 chr20 32529533 32529743 + 9.43 0.000 intron (NM_001256798, intron 1 of 10) intron (NM_001256798, intron 1 of 10) 19679 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr4-7854 chr4 102616245 102616455 + 9.43 0.000 intron (NM_003998, intron 23 of 23) intron (NM_003998, intron 23 of 23) -113864 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chr9-8281 chr9 112863129 112863339 + 9.43 0.000 intron (NM_001012994, intron 7 of 8) intron (NM_001012994, intron 7 of 8) 27642 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr14-2445 chr14 75557100 75557310 + 9.43 0.000 Intergenic Intergenic -21415 NM_017791 55640 Hs.509966 NM_017791 ENSG00000119686 FLVCR2 C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH|SLC49A2 feline leukemia virus subgroup C cellular receptor family member 2 protein-coding chr14-2611 chr14 58106093 58106303 + 9.43 0.000 intron (NM_001001872, intron 4 of 7) intron (NM_001001872, intron 4 of 7) 46015 NM_001001872 145407 Hs.26766 NM_001001872 ENSG00000139971 ARMH4 C14orf37|UT2|c14_5376 armadillo like helical domain containing 4 protein-coding chr5-3529 chr5 11090462 11090672 + 9.43 0.000 intron (NM_001364128, intron 12 of 19) MER1B|DNA|hAT-Charlie -329333 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr9-7991 chr9 93400465 93400675 + 9.43 0.000 Intergenic Intergenic 51038 NR_136237 158293 Hs.350364 NM_198841 ENSG00000188938 FAM120AOS C9orf10OS family with sequence similarity 120A opposite strand protein-coding chr8-1172 chr8 27327033 27327243 + 9.43 0.000 intron (NM_173175, intron 1 of 29) L2c|LINE|L2 1574 NM_173175 2185 Hs.491322 NM_004103 ENSG00000120899 PTK2B CADTK|CAKB|FADK2|FAK2|PKB|PTK|PYK2|RAFTK protein tyrosine kinase 2 beta protein-coding chr13-3172 chr13 109035149 109035359 + 9.43 0.000 intron (NM_015011, intron 23 of 34) intron (NM_015011, intron 23 of 34) 132049 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr11-4602 chr11 2180421 2180631 + 9.43 0.000 Intergenic Intergenic 7463 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr9-5394 chr9 92998052 92998262 + 9.43 0.000 intron (NM_001369952, intron 3 of 16) L1PA5|LINE|L1 16787 NR_121565 101927954 Hs.673794 NR_121565 LOC101927954 - uncharacterized LOC101927954 ncRNA chr3-5554 chr3 4235262 4235472 + 9.43 0.000 Intergenic L2c|LINE|L2 -67937 NM_001320677 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr1-10242 chr1 116972586 116972796 + 9.43 0.000 intron (NM_020440, intron 6 of 8) intron (NM_020440, intron 6 of 8) -29059 NM_001256111 9398 Hs.654598 NM_004258 ENSG00000134256 CD101 EWI-101|IGSF2|V7 CD101 molecule protein-coding chr20-550 chr20 5950465 5950675 + 9.43 0.000 promoter-TSS (NM_001281520) promoter-TSS (NM_001281520) -12 NM_001281467 51605 Hs.128791 NM_015939 ENSG00000089195 TRMT6 CGI-09|GCD10|Gcd10p tRNA methyltransferase 6 protein-coding chr12-5593 chr12 44459830 44460040 + 9.43 0.000 Intergenic Intergenic 415726 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr5-2022 chr5 54309857 54310067 + 9.43 0.000 intron (NM_019087, intron 1 of 4) intron (NM_019087, intron 1 of 4) 611 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr10-2236 chr10 80186678 80186888 + 9.43 0.000 intron (NM_001278408, intron 1 of 16) intron (NM_001278408, intron 1 of 16) 17708 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr8-6102 chr8 27505940 27506150 + 9.43 0.000 intron (NM_001979, intron 4 of 18) AluJr|SINE|Alu 14902 NM_001256482 2053 Hs.212088 NM_001979 ENSG00000120915 EPHX2 ABHD20|CEH|SEH epoxide hydrolase 2 protein-coding chr7-3987 chr7 137917169 137917379 + 9.43 0.000 intron (NM_001318246, intron 2 of 11) intron (NM_001318246, intron 2 of 11) 15714 NM_001318246 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr8-2983 chr8 96444038 96444248 + 9.43 0.000 Intergenic Intergenic -49670 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr3-4941 chr3 7633196 7633406 + 9.43 0.000 intron (NM_000844, intron 8 of 9) MIR|SINE|MIR -98017 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr16-2480 chr16 87963230 87963440 + 9.43 0.000 intron (NM_001173542, intron 1 of 12) intron (NM_001173542, intron 1 of 12) 3464 NM_001173542 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr17-8518 chr17 79185082 79185292 + 9.43 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 110250 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr4-3073 chr4 146957443 146957653 + 9.43 0.000 Intergenic ERVL-int|LTR|ERVL -11662 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr12-1864 chr12 51441716 51441926 + 9.43 0.000 TTS (NR_047672) TTS (NR_047672) 16704 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr1-7134 chr1 204158879 204159089 + 9.43 0.000 intron (NM_000537, intron 5 of 9) intron (NM_000537, intron 5 of 9) -6940 NM_001297762 55224 Hs.497469 NM_018208 ENSG00000143845 ETNK2 EKI2|HMFT1716 ethanolamine kinase 2 protein-coding chr11-6427 chr11 66014958 66015168 + 9.43 0.000 Intergenic Intergenic 3055 NM_001323 1474 Hs.139389 NM_001323 ENSG00000175315 CST6 - cystatin E/M protein-coding chr6-7738 chr6 90910722 90910932 + 9.43 0.000 Intergenic Intergenic -323755 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr7-3412 chr7 135305545 135305755 + 9.43 0.000 Intergenic MLT2B1|LTR|ERVL 73671 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr18-1440 chr18 25647042 25647252 + 9.43 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -294981 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr2-2474 chr2 119134487 119134697 + 9.43 0.000 Intergenic Intergenic 24159 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr10-1133 chr10 24208990 24209200 + 9.43 0.000 promoter-TSS (NM_019590) promoter-TSS (NM_019590) -43 NM_019590 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr2-3265 chr2 8842479 8842689 + 9.43 0.000 Intergenic Intergenic -4971 NM_001348731 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr5-6450 chr5 167284494 167284704 + 9.43 0.000 intron (NM_001122679, intron 1 of 29) intron (NM_001122679, intron 1 of 29) -116198 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr18-3273 chr18 51380160 51380370 + 9.43 0.000 Intergenic Intergenic -11777 NR_040075 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr6-3402 chr6 76333521 76333731 + 9.43 0.000 Intergenic L1PB1|LINE|L1 259997 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr5-6843 chr5 116002498 116002708 + 9.43 0.000 intron (NM_173800, intron 10 of 19) intron (NM_173800, intron 10 of 19) 40128 NM_173800 206338 Hs.98288 NM_173800 ENSG00000172901 LVRN APQ|AQPEP|TAQPEP laeverin protein-coding chr22-1066 chr22 20123508 20123718 + 9.43 0.000 intron (NM_001278641, intron 3 of 5) intron (NM_001278641, intron 3 of 5) -2789 NR_145765 109617010 NR_145765 ENSG00000264346 SNORA77B - small nucleolar RNA, H/ACA box 77B snoRNA chr20-4476 chr20 62776179 62776389 + 9.43 0.000 intron (NR_046224, intron 1 of 2) intron (NR_046224, intron 1 of 2) 572 NR_046224 100652730 Hs.254951 NR_046224 LINC00659 - long intergenic non-protein coding RNA 659 ncRNA chr14-2916 chr14 39594034 39594244 + 9.43 0.000 Intergenic Intergenic -161639 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr1-14088 chr1 30278642 30278852 + 9.43 0.000 Intergenic MIRb|SINE|MIR -241135 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr17-3167 chr17 75501240 75501450 + 9.43 0.000 TTS (NM_001351203) TTS (NM_001351203) 2797 NR_106843 102466911 NR_106843 ENSG00000284595 MIR6785 hsa-mir-6785 microRNA 6785 ncRNA chr8-4054 chr8 62904958 62905168 + 9.43 0.000 intron (NM_001304533, intron 4 of 6) intron (NM_001304533, intron 4 of 6) -72798 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr5-3985 chr5 14510612 14510822 + 9.43 0.000 TTS (NR_134469) TTS (NR_134469) 46734 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr3-6970 chr3 165218744 165218954 + 9.43 0.000 intron (NR_125764, intron 1 of 5) L2|LINE|L2 11889 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr4-7283 chr4 52091894 52092104 + 9.43 0.000 intron (NM_001346103, intron 7 of 8) L1PA7|LINE|L1 40695 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr2-4001 chr2 95334105 95334315 + 9.43 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) -12448 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr22-4225 chr22 46560239 46560449 + 9.43 0.000 Intergenic AluSx1|SINE|Alu -16744 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr2-8958 chr2 189369648 189369858 + 9.43 0.000 Intergenic Intergenic -71680 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr6-8306 chr6 144104522 144104732 + 9.43 0.000 Intergenic L1ME4b|LINE|L1 -9054 NM_031287 83443 Hs.110695 NM_031287 ENSG00000169976 SF3B5 SF3b10|Ysf3 splicing factor 3b subunit 5 protein-coding chr10-7574 chr10 17980759 17980969 + 9.43 0.000 intron (NM_001282734, intron 4 of 11) intron (NM_001282734, intron 4 of 11) 28946 NM_001145195 221074 Hs.350895 NM_152725 ENSG00000148482 SLC39A12 LZT-Hs8|ZIP-12|bA570F3.1 solute carrier family 39 member 12 protein-coding chr9-5809 chr9 129143184 129143394 + 9.43 0.000 intron (NM_178001, intron 10 of 10) intron (NM_178001, intron 10 of 10) 31601 NM_001193397 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr8-2569 chr8 40524201 40524411 + 9.43 0.000 Intergenic Intergenic -180943 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr22-3158 chr22 27396212 27396422 + 9.43 0.000 Intergenic AluJo|SINE|Alu 85666 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr6-8313 chr6 144922209 144922419 + 9.43 0.000 Intergenic Intergenic 516659 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr14-3328 chr14 88891879 88892089 + 9.43 0.000 Intergenic Intergenic 67333 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr2-7568 chr2 24722267 24722477 + 9.43 0.000 intron (NM_001362950, intron 14 of 23) MARNA|DNA|TcMar-Mariner -70743 NM_024322 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chrX-4120 chrX 26100402 26100612 + 9.43 0.000 Intergenic LTR40c|LTR|ERVL -37836 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr7-9664 chr7 151665633 151665843 + 9.43 0.000 intron (NM_016203, intron 4 of 15) intron (NM_016203, intron 4 of 15) -33120 NM_001304531 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr1-9086 chr1 16093785 16093995 + 9.43 0.000 Intergenic MER90|LTR|ERV1 -20239 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr4-5310 chr4 179767961 179768171 + 9.43 0.000 Intergenic L1ME2|LINE|L1 1391083 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr12-5754 chr12 233001 233211 + 9.43 0.000 intron (NM_001190997, intron 5 of 12) intron (NM_001190997, intron 5 of 12) -18949 NM_001122848 6539 Hs.437174 NM_003044 ENSG00000111181 SLC6A12 BGT-1|BGT1|GAT2 solute carrier family 6 member 12 protein-coding chr9-5901 chr9 132512034 132512244 + 9.43 0.000 intron (NM_207417, intron 4 of 6) MLT1D|LTR|ERVL-MaLR -70467 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr3-6414 chr3 100098447 100098657 + 9.43 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) 15961 NM_182909 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr1-13999 chr1 25832337 25832547 + 9.43 0.000 3' UTR (NM_001099627, exon 7 of 7) 3' UTR (NM_001099627, exon 7 of 7) -8836 NR_024498 646471 Hs.727271 NR_024498 LOC646471 - uncharacterized LOC646471 ncRNA chr3-4394 chr3 195223336 195223546 + 9.43 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 24479 NM_001308069 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr11-5973 chr11 18774680 18774890 + 9.43 0.000 intron (NM_006906, intron 1 of 14) intron (NM_006906, intron 1 of 14) 17013 NM_001039970 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr7-3576 chr7 22726352 22726562 + 9.43 0.000 promoter-TSS (NM_001318095) promoter-TSS (NM_001318095) -743 NM_001318095 3569 Hs.654458 NM_000600 ENSG00000136244 IL6 BSF-2|BSF2|CDF|HGF|HSF|IFN-beta-2|IFNB2|IL-6 interleukin 6 protein-coding chr11-8884 chr11 14829915 14830125 + 9.43 0.000 intron (NM_000922, intron 7 of 15) L1ME3A|LINE|L1 62185 NM_024514 120227 Hs.371427 NM_024514 ENSG00000186104 CYP2R1 - cytochrome P450 family 2 subfamily R member 1 protein-coding chr1-13160 chr1 202834853 202835063 + 9.43 0.000 Intergenic Intergenic 14701 NR_038135 641515 Hs.23459 NR_038135 ENSG00000184774 MGAT4EP - MGAT4 family member E, pseudogene pseudo chr5-7787 chr5 64030347 64030557 + 9.43 0.000 Intergenic Intergenic -68160 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr1-8305 chr1 45246470 45246680 + 9.43 0.000 Intergenic THE1B|LTR|ERVL-MaLR -39970 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr14-1313 chr14 58456019 58456229 + 9.43 0.000 intron (NM_001329944, intron 9 of 31) L1M4|LINE|L1 16443 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr13-792 chr13 97740402 97740612 + 9.43 0.000 Intergenic AluJb|SINE|Alu -213168 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr14-2940 chr14 45364750 45364960 + 9.43 0.000 Intergenic Intergenic -111653 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding chr3-4152 chr3 123609019 123609229 + 9.43 0.000 TTS (NM_053028) TTS (NM_053028) 11424 NM_053032 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr8-4272 chr8 94185408 94185618 + 9.43 0.000 intron (NM_001144663, intron 3 of 17) intron (NM_001144663, intron 3 of 17) 23042 NM_004063 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding chr4-2722 chr4 4625515 4625725 + 9.43 0.000 intron (NR_037888, intron 2 of 5) MLT1D|LTR|ERVL-MaLR -38706 NR_145783 109623454 NR_145783 SNORD162 - small nucleolar RNA, C/D box 162 snoRNA chr1-14788 chr1 70672462 70672672 + 9.43 0.000 Intergenic MIRb|SINE|MIR -33886 NR_125938 101927244 Hs.568660 NR_125938 ENSG00000229051 LINC01788 - long intergenic non-protein coding RNA 1788 ncRNA chr14-4481 chr14 36210575 36210785 + 9.43 0.000 Intergenic L2c|LINE|L2 -34029 NR_049735 100886964 Hs.742592 NR_049735 PTCSC3 - papillary thyroid carcinoma susceptibility candidate 3 ncRNA chr4-4333 chr4 34171111 34171321 + 9.43 0.000 intron (NR_147184, intron 2 of 3) intron (NR_147184, intron 2 of 3) 98531 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr8-7050 chr8 113956758 113956968 + 9.43 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -519924 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr7-6010 chr7 104860593 104860803 + 9.43 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) -56606 NR_034141 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr1-13648 chr1 10886846 10887056 + 9.43 0.000 Intergenic L1MB8|LINE|L1 79736 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr6-2744 chr6 100116618 100116828 + 9.43 0.000 Intergenic Intergenic -122485 NM_032503 84539 Hs.591342 NM_032503 ENSG00000152034 MCHR2 GPR145|GPRv17|MCH-2R|MCH-R2|MCH2|MCH2R|MCHR-2|SLT melanin concentrating hormone receptor 2 protein-coding chr11-6794 chr11 89465992 89466202 + 9.43 0.000 intron (NM_001291929, intron 1 of 16) MLT1A0|LTR|ERVL-MaLR 24663 NM_001291929 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr1-6329 chr1 3511227 3511437 + 9.43 0.000 intron (NM_001409, intron 9 of 36) intron (NM_001409, intron 9 of 36) 49458 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr1-12829 chr1 89636097 89636307 + 9.43 0.000 intron (NM_032270, intron 1 of 2) MIRb|SINE|MIR 3082 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr1-13500 chr1 4477063 4477273 + 9.43 0.000 Intergenic L1MCc|LINE|L1 65117 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr18-2100 chr18 50118367 50118577 + 9.43 0.000 intron (NM_001080467, intron 1 of 39) MER5A|DNA|hAT-Charlie 8091 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr22-2082 chr22 17845534 17845744 + 9.43 0.000 intron (NM_001122731, intron 18 of 19) MIRb|SINE|MIR 61247 NM_001136004 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr18-2122 chr18 53847912 53848122 + 9.43 0.000 Intergenic THE1C|LTR|ERVL-MaLR -266958 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr6-3991 chr6 113997047 113997257 + 9.43 0.000 intron (NR_125845, intron 4 of 9) intron (NR_125845, intron 4 of 9) -26004 NM_001527 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr3-5764 chr3 22830822 22831032 + 9.43 0.000 Intergenic L1PA7|LINE|L1 371651 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr2-9263 chr2 220046619 220046829 + 9.43 0.000 Intergenic Intergenic -140159 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr9-5846 chr9 130313409 130313619 + 9.43 0.000 intron (NM_001291815, intron 15 of 97) MIR3|SINE|MIR 47754 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr17-3150 chr17 49911637 49911847 + 9.43 0.000 Intergenic Intergenic -57448 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr3-6810 chr3 145863644 145863854 + 9.43 0.000 Intergenic Intergenic 205436 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr17-3495 chr17 50027193 50027403 + 9.43 0.000 Intergenic Intergenic 28441 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 PICART1 - p53 inducible cancer associated RNA transcript 1 ncRNA chr17-2312 chr17 44844309 44844519 + 9.43 0.000 Intergenic Intergenic -1915 NM_001271880 51751 Hs.151787 NM_016438 ENSG00000131097 HIGD1B CLST11240|CLST11240-15 HIG1 hypoxia inducible domain family member 1B protein-coding chr3-6716 chr3 135084307 135084517 + 9.43 0.000 intron (NM_004441, intron 3 of 15) intron (NM_004441, intron 3 of 15) 289152 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr11-6542 chr11 69894105 69894315 + 9.43 0.000 Intergenic Intergenic -74794 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr6-2887 chr6 10101863 10102073 + 9.43 0.000 Intergenic MIRc|SINE|MIR -302534 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr9-2418 chr9 135023421 135023631 + 9.43 0.000 Intergenic Intergenic -51979 NM_006334 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr4-4369 chr4 39874572 39874782 + 9.43 0.000 intron (NM_001100399, intron 19 of 32) intron (NM_001100399, intron 19 of 32) 103234 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr4-2216 chr4 139031864 139032074 + 9.43 0.000 intron (NM_012118, intron 1 of 2) AluSq|SINE|Alu 16188 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr1-2306 chr1 42035628 42035838 + 9.43 0.000 intron (NR_038261, intron 1 of 3) CpG 201 NR_038261 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr4-2186 chr4 112890063 112890273 + 9.43 0.000 intron (NM_001354271, intron 1 of 42) intron (NM_001354271, intron 1 of 42) 29181 NM_001354261 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr4-5307 chr4 178730060 178730270 + 9.43 0.000 Intergenic Intergenic -822229 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr3-2662 chr3 36009777 36009987 + 9.43 0.000 Intergenic AluJb|SINE|Alu 265406 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr10-5925 chr10 120103343 120103553 + 9.43 0.000 Intergenic Intergenic 144935 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr2-7868 chr2 52127671 52127881 + 9.43 0.000 intron (NR_135237, intron 7 of 10) MER4-int|LTR|ERV1 -242872 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr8-6970 chr8 107105299 107105509 + 9.43 0.000 Intergenic Intergenic 231111 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr14-3412 chr14 95996901 95997111 + 9.43 0.000 Intergenic L1PA13|LINE|L1 -42318 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr18-850 chr18 24187547 24187757 + 9.43 0.000 intron (NM_001242508, intron 6 of 15) intron (NM_001242508, intron 6 of 15) 48168 NM_138644 26256 Hs.511983 NM_012189 ENSG00000154040 CABYR CABYRa|CABYRc|CABYRc/d|CABYRe|CBP86|CT88|FSP-2|FSP2 calcium binding tyrosine phosphorylation regulated protein-coding chr8-3684 chr8 17433972 17434182 + 9.43 0.000 Intergenic Intergenic -20726 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr6-3026 chr6 52549948 52550158 + 9.43 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 27007 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr11-4074 chr11 21044563 21044773 + 9.43 0.000 intron (NM_201551, intron 12 of 18) L2a|LINE|L2 375082 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr3-6037 chr3 49747806 49748016 + 9.43 0.000 exon (NM_001242829, exon 2 of 6) exon (NM_001242829, exon 2 of 6) -23937 NM_013334 29925 Hs.567488 NM_013334 ENSG00000173540 GMPPB LGMDR19|MDDGA14|MDDGB14|MDDGC14 GDP-mannose pyrophosphorylase B protein-coding chr3-6440 chr3 103586379 103586589 + 9.43 0.000 Intergenic Intergenic -62368 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr9-5608 chr9 116374440 116374650 + 9.43 0.000 intron (NM_002581, intron 19 of 21) intron (NM_002581, intron 19 of 21) 26061 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr1-8149 chr1 13892793 13893003 + 9.43 0.000 Intergenic CpG 143483 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr8-6692 chr8 82675897 82676107 + 9.43 0.000 Intergenic L1PA13|LINE|L1 -236102 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr11-6041 chr11 28757040 28757250 + 9.43 0.000 Intergenic Intergenic -279597 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr10-3688 chr10 104054591 104054801 + 9.43 0.000 intron (NM_000494, intron 20 of 55) intron (NM_000494, intron 20 of 55) -6510 NR_030760 100126326 NR_030760 ENSG00000283788 MIR936 MIRN936|hsa-mir-936 microRNA 936 ncRNA chr4-7142 chr4 37865703 37865913 + 9.43 0.000 Intergenic Intergenic -25276 NM_001253912 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr11-7858 chr11 118341414 118341624 + 9.43 0.000 intron (NM_001040651, intron 1 of 3) intron (NM_001040651, intron 1 of 3) 1186 NM_001040651 915 Hs.504048 NM_000732 ENSG00000167286 CD3D CD3-DELTA|IMD19|T3D CD3d molecule protein-coding chr13-2994 chr13 98392911 98393121 + 9.43 0.000 intron (NM_005766, intron 11 of 26) intron (NM_005766, intron 11 of 26) 129109 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr20-829 chr20 4091073 4091283 + 9.43 0.000 Intergenic MamRep1527|LTR|LTR -57601 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr15-2923 chr15 45551371 45551581 + 9.43 0.000 intron (NR_022014, intron 5 of 5) LTR7|LTR|ERV1 14225 NR_145777 109617005 NR_145777 ENSG00000207516 SNORA41B - small nucleolar RNA, H/ACA box 41B snoRNA chr16-5371 chr16 86733140 86733350 + 9.43 0.000 intron (NR_135182, intron 2 of 3) intron (NR_135182, intron 2 of 3) 11154 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr1-4682 chr1 223402425 223402635 + 9.43 0.000 Intergenic Intergenic 9115 NM_152610 164127 Hs.192090 NM_152610 ENSG00000178395 CCDC185 C1orf65 coiled-coil domain containing 185 protein-coding chr11-5743 chr11 2561893 2562103 + 9.43 0.000 intron (NM_181798, intron 2 of 15) intron (NM_181798, intron 2 of 15) 100544 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr15-5291 chr15 101105126 101105336 + 9.43 0.000 Intergenic Intergenic 146817 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr1-15516 chr1 156541934 156542144 + 9.43 0.000 intron (NM_178229, intron 22 of 37) L2c|LINE|L2 30526 NM_178229 128239 Hs.591495 NM_178229 ENSG00000183856 IQGAP3 - IQ motif containing GTPase activating protein 3 protein-coding chrX-2493 chrX 89053278 89053488 + 9.43 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 306158 NM_001184771 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr5-7247 chr5 10894487 10894697 + 9.43 0.000 Intergenic Intergenic -133358 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr8-3419 chr8 71637986 71638196 + 9.43 0.000 Intergenic Intergenic -89997 NM_001370336 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr11-4797 chr11 2673179 2673389 + 9.43 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 26714 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr6-6741 chr6 2587325 2587535 + 9.43 0.000 Intergenic L1MA9|LINE|L1 -47070 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr2-6824 chr2 61690870 61691080 + 9.43 0.000 Intergenic Intergenic -152619 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr4-7056 chr4 29616507 29616717 + 9.43 0.000 Intergenic Intergenic 402320 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr1-9179 chr1 21128615 21128825 + 9.43 0.000 intron (NM_001198803, intron 1 of 12) L4_A_Mam|LINE|RTE-X -17337 NM_003760 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr10-5336 chr10 71511661 71511871 + 9.43 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) 154 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr6-4111 chr6 153320030 153320240 + 9.43 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -188853 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chrX-2718 chrX 122353943 122354153 + 9.43 0.000 Intergenic L1MA1|LINE|L1 -830195 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chrX-4657 chrX 80756758 80756968 + 9.43 0.000 intron (NM_153252, intron 6 of 40) (ACATAC)n|Simple_repeat|Simple_repeat 53014 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr11-5815 chr11 7214518 7214728 + 9.43 0.000 Intergenic L2b|LINE|L2 -20143 NR_031683 100313774 NR_031683 ENSG00000221703 MIR302E MIRN302E microRNA 302e ncRNA chr2-3353 chr2 224040011 224040221 + 9.43 0.000 promoter-TSS (NM_001136528) promoter-TSS (NM_001136528) -797 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr10-4800 chr10 7943872 7944082 + 9.43 0.000 intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 108514 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 - GATA3 antisense RNA 1 ncRNA chr20-2259 chr20 2793370 2793580 + 9.43 0.000 TTS (NM_019609) TTS (NM_019609) 7152 NM_019609 56265 Hs.659346 NM_019609 ENSG00000088882 CPXM1 CPX1|CPXM carboxypeptidase X, M14 family member 1 protein-coding chr10-3664 chr10 101142375 101142585 + 9.43 0.000 Intergenic Intergenic -1214 NR_130724 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr11-4867 chr11 34359151 34359361 + 9.43 0.000 Intergenic Intergenic -1246 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr9-3653 chr9 94862070 94862280 + 9.43 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 52213 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr5-5740 chr5 170318764 170318974 + 9.43 0.000 Intergenic Intergenic -6153 NR_147701 100128059 Hs.587351 NR_147701 ENSG00000250274 LOC100128059 - uncharacterized LOC100128059 ncRNA chr3-3738 chr3 195579559 195579769 + 9.43 0.000 intron (NM_001647, intron 1 of 4) intron (NM_001647, intron 1 of 4) 4276 NM_001647 347 Hs.522555 NM_001647 ENSG00000189058 APOD - apolipoprotein D protein-coding chr15-1254 chr15 78437761 78437971 + 9.43 0.000 promoter-TSS (NM_001320941) promoter-TSS (NM_001320941) -350 NM_004136 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr21-1414 chr21 10579045 10579255 + 9.43 0.000 intron (NM_199260, intron 15 of 21) L1MA8|LINE|L1 57636 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr11-6238 chr11 48067649 48067859 + 9.43 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) -29028 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr5-4496 chr5 10599787 10599997 + 9.43 0.000 intron (NM_001164440, intron 1 of 3) L1MB4|LINE|L1 35822 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr9-5681 chr9 124024462 124024672 + 9.43 0.000 intron (NM_004789, intron 4 of 4) MIRb|SINE|MIR 12799 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr5-4615 chr5 32343021 32343231 + 9.43 0.000 Intergenic MER57-int|LTR|ERV1 -30187 NM_001294344 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr6-7763 chr6 94581275 94581485 + 9.43 0.000 Intergenic LTR79|LTR|ERVL 863077 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr3-5173 chr3 63968089 63968299 + 9.43 0.000 intron (NM_001128149, intron 1 of 8) intron (NM_001128149, intron 1 of 8) 400 NM_001128149 6314 Hs.476595 NM_000333 ENSG00000163635 ATXN7 ADCAII|OPCA3|SCA7|SGF73 ataxin 7 protein-coding chr14-4474 chr14 35234132 35234342 + 9.43 0.000 intron (NM_014672, intron 5 of 7) intron (NM_014672, intron 5 of 7) -44321 NM_001282234 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr18-1438 chr18 23498745 23498955 + 9.43 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -4620 NM_001318707 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr9-3721 chr9 114409506 114409716 + 9.43 0.000 intron (NM_001083885, intron 7 of 11) L2a|LINE|L2 -15206 NM_030767 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding chr19-3496 chr19 39448185 39448395 + 9.43 0.000 intron (NM_001111020, intron 2 of 29) intron (NM_001111020, intron 2 of 29) 2642 NM_003169 6829 Hs.631604 NM_003169 ENSG00000196235 SUPT5H SPT5|SPT5H|Tat-CT1 SPT5 homolog, DSIF elongation factor subunit protein-coding chr7-4061 chr7 2595739 2595949 + 9.43 0.000 intron (NM_001287501, intron 14 of 19) intron (NM_001287501, intron 14 of 19) -36142 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr1-7534 chr1 176345891 176346101 + 9.43 0.000 Intergenic MSTA|LTR|ERVL-MaLR -117179 NM_020318 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chrX-1962 chrX 9132106 9132316 + 9.31 0.000 Intergenic L3|LINE|CR1 -98084 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding chr4-4758 chr4 98653071 98653281 + 9.31 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 5435 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr17-2216 chr17 81230888 81231098 + 9.31 0.000 intron (NM_144679, intron 10 of 11) intron (NM_144679, intron 10 of 11) 2286 NR_135654 105371925 Hs.620720 NR_135654 LOC105371925 - uncharacterized LOC105371925 ncRNA chr17-4635 chr17 12415115 12415325 + 9.31 0.000 Intergenic Intergenic -134748 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chrX-3466 chrX 29328406 29328616 + 9.31 0.000 intron (NM_014271, intron 3 of 10) intron (NM_014271, intron 3 of 10) -245767 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr12-5188 chr12 104671938 104672148 + 9.31 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 80410 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr2-10044 chr2 31765623 31765833 + 9.31 0.000 Intergenic MIRb|SINE|MIR 38252 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA chr8-4815 chr8 16753843 16754053 + 9.31 0.000 Intergenic Intergenic 248397 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr4-2678 chr4 1746510 1746720 + 9.31 0.000 Intergenic Intergenic 25094 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chr4-3945 chr4 170243841 170244051 + 9.31 0.000 intron (NR_125889, intron 1 of 2) L2|LINE|L2 17355 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chr10-5224 chr10 63047420 63047630 + 9.31 0.000 Intergenic L1M4|LINE|L1 -85722 NM_001282405 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr2-9637 chr2 15869920 15870130 + 9.31 0.000 Intergenic Intergenic -50374 NR_125783 103752554 Hs.269571 NR_125783 ENSG00000223850 MYCNUT MYCNUN|lncUSMycN MYCN upstream transcript ncRNA chr6-2023 chr6 43270222 43270432 + 9.31 0.000 intron (NM_032538, intron 13 of 14) intron (NM_032538, intron 13 of 14) 26846 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr13-3916 chr13 56547376 56547586 + 9.31 0.000 Intergenic AluSx3|SINE|Alu -593437 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr10-4613 chr10 116877988 116878198 + 9.31 0.000 intron (NM_001242699, intron 11 of 13) L2a|LINE|L2 -28371 NM_001330164 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding chr4-8422 chr4 153095704 153095914 + 9.31 0.000 Intergenic Intergenic -56525 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr3-4108 chr3 110526730 110526940 + 9.31 0.000 Intergenic Intergenic 543124 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr12-6632 chr12 231972 232182 + 9.31 0.000 intron (NM_001190997, intron 5 of 12) MIRb|SINE|MIR -17920 NM_001122848 6539 Hs.437174 NM_003044 ENSG00000111181 SLC6A12 BGT-1|BGT1|GAT2 solute carrier family 6 member 12 protein-coding chr5-2049 chr5 113034412 113034622 + 9.31 0.000 intron (NM_001085377, intron 17 of 18) intron (NM_001085377, intron 17 of 18) 57719 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chrX-4048 chrX 18462954 18463164 + 9.31 0.000 intron (NM_001037343, intron 2 of 21) intron (NM_001037343, intron 2 of 21) 20835 NM_001037343 6792 Hs.659851 NM_003159 ENSG00000008086 CDKL5 CFAP247|EIEE2|ISSX|STK9 cyclin dependent kinase like 5 protein-coding chr8-4430 chr8 110121233 110121443 + 9.31 0.000 Intergenic L1M1|LINE|L1 -145567 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr3-4216 chr3 134242876 134243086 + 9.31 0.000 intron (NM_001005861, intron 1 of 14) intron (NM_001005861, intron 1 of 14) 7763 NM_001005861 6259 Hs.654562 NM_002958 ENSG00000163785 RYK D3S3195|JTK5|JTK5A|RYK1 receptor like tyrosine kinase protein-coding chr1-5908 chr1 10914147 10914357 + 9.31 0.000 Intergenic Intergenic 52435 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr1-9272 chr1 25219242 25219452 + 9.31 0.000 Intergenic L1MEc|LINE|L1 13155 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr1-7415 chr1 39721752 39721962 + 9.31 0.000 Intergenic L2a|LINE|L2 -16988 NM_203456 10450 Hs.524690 NM_006112 ENSG00000084072 PPIE CYP-33|CYP33 peptidylprolyl isomerase E protein-coding chr10-2099 chr10 124705725 124705935 + 9.31 0.000 intron (NR_120631, intron 1 of 1) intron (NR_120631, intron 1 of 1) 1802 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chrX-2845 chrX 139573600 139573810 + 9.31 0.000 Intergenic MSTA|LTR|ERVL-MaLR 42969 NM_000133 2158 Hs.522798 NM_000133 ENSG00000101981 F9 F9 p22|FIX|HEMB|P19|PTC|THPH8 coagulation factor IX protein-coding chr2-3554 chr2 25673859 25674069 + 9.31 0.000 promoter-TSS (NM_021907) promoter-TSS (NM_021907) -290 NM_001256304 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr12-5335 chr12 115314028 115314238 + 9.31 0.000 Intergenic Intergenic -629958 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr13-2277 chr13 28356241 28356451 + 9.31 0.000 intron (NM_002019, intron 15 of 29) intron (NM_002019, intron 15 of 29) 138782 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr4-3712 chr4 62061083 62061293 + 9.31 0.000 intron (NM_001371343, intron 23 of 23) intron (NM_001371343, intron 23 of 23) 100577 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr7-2653 chr7 3306583 3306793 + 9.31 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 5436 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr10-9143 chr10 128057936 128058146 + 9.31 0.000 non-coding (NR_136149, exon 4 of 4) non-coding (NR_136149, exon 4 of 4) 4384 NR_136149 105378553 NR_136149 AS-PTPRE - lncRNA antisense to PTPRE protein-coding gene ncRNA chr13-3464 chr13 111908259 111908469 + 9.31 0.000 Intergenic MER74A|LTR|ERVL 14868 NR_120401 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr11-10307 chr11 107821423 107821633 + 9.31 0.000 intron (NM_017515, intron 1 of 7) intron (NM_017515, intron 1 of 7) 37259 NM_017515 54733 Hs.524014 NM_017515 ENSG00000110660 SLC35F2 HSNOV1 solute carrier family 35 member F2 protein-coding chr9-5446 chr9 97805196 97805406 + 9.31 0.000 intron (NR_147055, intron 4 of 10) intron (NR_147055, intron 4 of 10) 47779 NR_147055 101928337 NR_147055 ENSG00000236130 PTCSC2 - papillary thyroid carcinoma susceptibility candidate 2 ncRNA chr10-6704 chr10 123282983 123283193 + 9.31 0.000 Intergenic LTR12C|LTR|ERV1 128686 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr6-2055 chr6 105994719 105994929 + 9.31 0.000 Intergenic CpG -91512 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr8-7393 chr8 139404658 139404868 + 9.31 0.000 Intergenic Intergenic 298360 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr14-3402 chr14 95623167 95623377 + 9.31 0.000 Intergenic Intergenic -28825 NR_152604 27004 Hs.510368 NM_012468 TCL6 TNG1|TNG2 T cell leukemia/lymphoma 6 ncRNA chr5-3291 chr5 118379402 118379612 + 9.31 0.000 intron (NR_104610, intron 9 of 9) intron (NR_104610, intron 9 of 9) 96933 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr19-2606 chr19 2320003 2320213 + 9.31 0.000 Intergenic Intergenic 8478 NM_016199 51690 Hs.512610 NM_016199 ENSG00000130332 LSM7 YNL147W LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr2-13704 chr2 166126124 166126334 + 9.31 0.000 intron (NR_110260, intron 2 of 11) intron (NR_110260, intron 2 of 11) 1791 NR_148667 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr14-2867 chr14 32514793 32515003 + 9.31 0.000 intron (NM_004274, intron 2 of 13) intron (NM_004274, intron 2 of 13) 185600 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr3-3310 chr3 170492999 170493209 + 9.31 0.000 intron (NM_020949, intron 4 of 7) intron (NM_020949, intron 4 of 7) 25819 NR_135555 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr6-7955 chr6 111980169 111980379 + 9.31 0.000 Intergenic Intergenic -70877 NR_149099 105377946 NR_149099 LINC02527 - long intergenic non-protein coding RNA 2527 ncRNA chr7-6518 chr7 30684346 30684556 + 9.31 0.000 intron (NM_001202475, intron 2 of 12) intron (NM_001202475, intron 2 of 12) -1926 NM_001202482 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chrX-4601 chrX 73413764 73413974 + 9.31 0.000 Intergenic Intergenic -33385 NM_005193 1046 Hs.553488 NM_005193 ENSG00000131264 CDX4 - caudal type homeobox 4 protein-coding chr11-10185 chr11 94910872 94911082 + 9.31 0.000 Intergenic LTR78B|LTR|ERV1 62579 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr6-4652 chr6 49900385 49900595 + 9.31 0.000 Intergenic AluY|SINE|Alu -23394 NM_001205220 167 Hs.109620 NM_001131 ENSG00000124812 CRISP1 AEGL1|ARP|CRISP-1|HEL-S-57|HSCRISP1D|HSCRISP1G|HUMARP cysteine rich secretory protein 1 protein-coding chr6-3224 chr6 139736534 139736744 + 9.31 0.000 Intergenic Intergenic -34434 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr6-1760 chr6 68153799 68154009 + 9.31 0.000 Intergenic AluSp|SINE|Alu 98553 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr3-4151 chr3 123520591 123520801 + 9.31 0.000 intron (NM_001329786, intron 3 of 5) intron (NM_001329786, intron 3 of 5) 63921 NM_001329787 201562 Hs.705480 NM_198402 ENSG00000206527 HACD2 PTPLB 3-hydroxyacyl-CoA dehydratase 2 protein-coding chr15-2577 chr15 58065258 58065468 + 9.31 0.000 non-coding (NR_147215, exon 1 of 3) non-coding (NR_147215, exon 1 of 3) 138 NR_147215 283665 Hs.638961 NR_147215 LOC283665 - uncharacterized LOC283665 ncRNA chr11-10485 chr11 118149937 118150147 + 9.31 0.000 intron (NM_174934, intron 1 of 4) intron (NM_174934, intron 1 of 4) 2781 NM_001142348 6330 Hs.65239 NM_174934 ENSG00000177098 SCN4B ATFB17|LQT10|Navbeta4 sodium voltage-gated channel beta subunit 4 protein-coding chr6-8024 chr6 118321578 118321788 + 9.31 0.000 Intergenic Intergenic -179690 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr10-2997 chr10 93873594 93873804 + 9.31 0.000 Intergenic Intergenic -20279 NR_144337 159371 Hs.632085 NM_153226 ENSG00000176273 SLC35G1 C10orf60|POST|TMEM20 solute carrier family 35 member G1 protein-coding chr7-8028 chr7 19252968 19253178 + 9.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -107652 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chr4-5722 chr4 41618765 41618975 + 9.31 0.000 intron (NM_001330786, intron 4 of 22) intron (NM_001330786, intron 4 of 22) 5968 NM_001330983 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr22-4067 chr22 42511714 42511924 + 9.31 0.000 non-coding (NR_027786, exon 10 of 11) non-coding (NR_027786, exon 10 of 11) 7977 NM_015703 27341 Hs.745006 NM_015703 ENSG00000189306 RRP7A BK126B4.3|CGI-96|Rrp7 ribosomal RNA processing 7 homolog A protein-coding chr11-7281 chr11 34494275 34494485 + 9.31 0.000 intron (NM_001422, intron 2 of 6) intron (NM_001422, intron 2 of 6) 17344 NM_198381 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr8-5120 chr8 66192990 66193200 + 9.31 0.000 intron (NR_039979, intron 1 of 2) intron (NR_039979, intron 1 of 2) 981 NR_039979 100505659 Hs.529729 NR_039979 ENSG00000253138 LINC00967 - long intergenic non-protein coding RNA 967 ncRNA chr9-4815 chr9 136423627 136423837 + 9.31 0.000 TTS (NM_001282946) TTS (NM_001282946) 13074 NM_015160 23203 Hs.495471 NM_015160 ENSG00000165688 PMPCA Alpha-MPP|CLA1|CPD3|INPP5E|P-55|SCAR2 peptidase, mitochondrial processing alpha subunit protein-coding chr14-2160 chr14 89658852 89659062 + 9.31 0.000 Intergenic MLT1E|LTR|ERVL-MaLR -39792 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr7-4091 chr7 30906566 30906776 + 9.31 0.000 Intergenic Intergenic -5023 NM_198098 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr9-7484 chr9 29332719 29332929 + 9.31 0.000 Intergenic MER44D|DNA|TcMar-Tigger -119223 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr21-1167 chr21 42314044 42314254 + 9.31 0.000 intron (NM_003226, intron 1 of 2) intron (NM_003226, intron 1 of 2) 1447 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr3-11040 chr3 182843457 182843667 + 9.31 0.000 intron (NM_014616, intron 8 of 29) intron (NM_014616, intron 8 of 29) 50058 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr9-1598 chr9 104906915 104907125 + 9.31 0.000 intron (NM_005502, intron 1 of 49) intron (NM_005502, intron 1 of 49) 21135 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr2-8552 chr2 133844278 133844488 + 9.31 0.000 Intergenic Intergenic -275552 NM_001371457 chr3-5443 chr3 177443547 177443757 + 9.31 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 1731 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr10-5817 chr10 110287028 110287238 + 9.31 0.000 3' UTR (NM_130439, exon 6 of 6) 3' UTR (NM_130439, exon 6 of 6) 17787 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr6-3399 chr6 73234728 73234938 + 9.31 0.000 Intergenic AluJo|SINE|Alu -9337 NM_001126063 100129128 Hs.663639 NM_001126063 ENSG00000256980 KHDC1L - KH domain containing 1 like protein-coding chr7-3599 chr7 28588179 28588389 + 9.31 0.000 intron (NM_182899, intron 4 of 9) intron (NM_182899, intron 4 of 9) -97849 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr19-4932 chr19 44102130 44102340 + 9.31 0.000 intron (NM_013398, intron 5 of 5) intron (NM_013398, intron 5 of 5) 7874 NM_001321645 7767 Hs.585869 NM_013398 ENSG00000267680 ZNF224 BMZF-2|BMZF2|KOX22|ZNF233|ZNF255|ZNF27 zinc finger protein 224 protein-coding chr4-3509 chr4 147194287 147194497 + 9.31 0.000 Intergenic Intergenic 150325 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA chr6-3628 chr6 117037756 117037966 + 9.31 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 160619 NM_173560 222546 Hs.352276 NM_173560 ENSG00000185002 RFX6 MTCHRS|MTFS|RFXDC1|dJ955L16.1 regulatory factor X6 protein-coding chr5-4138 chr5 88104222 88104432 + 9.31 0.000 Intergenic L2a|LINE|L2 164518 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding chr12-5114 chr12 96628206 96628416 + 9.31 0.000 intron (NM_001306084, intron 30 of 67) intron (NM_001306084, intron 30 of 67) 138734 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr5-6751 chr5 79724562 79724772 + 9.31 0.000 intron (NM_153610, intron 1 of 12) intron (NM_153610, intron 1 of 12) 34831 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr6-6666 chr6 163118788 163118998 + 9.31 0.000 intron (NM_001080379, intron 4 of 4) intron (NM_001080379, intron 4 of 4) -64732 NR_110871 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr13-1201 chr13 50402151 50402361 + 9.31 0.000 intron (NR_109974, intron 3 of 6) MIRb|SINE|MIR 125193 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr7-7592 chr7 128932267 128932477 + 9.31 0.000 Intergenic Intergenic -4660 NM_001347928 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr4-7807 chr4 98558928 98559138 + 9.31 0.000 intron (NM_005723, intron 1 of 7) MIRb|SINE|MIR 99578 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr11-2655 chr11 61540052 61540262 + 9.31 0.000 intron (NM_001365809, intron 6 of 12) intron (NM_001365809, intron 6 of 12) 2719 NM_001370210 9066 Hs.131188 NM_004200 ENSG00000011347 SYT7 IPCA-7|IPCA7|PCANAP7|SYT-VII|SYTVII synaptotagmin 7 protein-coding chr8-5478 chr8 48392864 48393074 + 9.31 0.000 Intergenic Intergenic -158598 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr9-5279 chr9 82682594 82682804 + 9.31 0.000 Intergenic Intergenic 380443 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr10-5047 chr10 36822291 36822501 + 9.31 0.000 Intergenic Intergenic -303461 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr12-2168 chr12 131737348 131737558 + 9.31 0.000 intron (NM_004592, intron 7 of 17) intron (NM_004592, intron 7 of 17) 26363 NM_004592 6433 Hs.308171 NM_004592 ENSG00000061936 SFSWAP SFRS8|SWAP splicing factor SWAP protein-coding chr20-2155 chr20 38382250 38382460 + 9.31 0.000 Intergenic Intergenic 35873 NM_004139 3929 Hs.154078 NM_004139 ENSG00000129988 LBP BPIFD2 lipopolysaccharide binding protein protein-coding chr5-4724 chr5 43153015 43153225 + 9.31 0.000 intron (NM_003432, intron 4 of 7) HERVL40-int|LTR|ERVL 31555 NM_001330714 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr5-4157 chr5 95406894 95407104 + 9.31 0.000 intron (NM_152548, intron 3 of 9) intron (NM_152548, intron 3 of 9) 15633 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr3-7150 chr3 185737121 185737331 + 9.31 0.000 intron (NR_138486, intron 2 of 15) L3|LINE|CR1 23974 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr13-2823 chr13 104396890 104397100 + 9.31 0.000 Intergenic MER74B|LTR|ERVL 971795 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr4-8270 chr4 141021687 141021897 + 9.31 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 111677 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr14-1995 chr14 52312884 52313094 + 9.31 0.000 Intergenic Intergenic -1323 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chrX-902 chrX 99560978 99561188 + 9.31 0.000 Intergenic AluSq2|SINE|Alu 849190 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr7-2282 chr7 32909651 32909861 + 9.31 0.000 Intergenic Intergenic -17996 NM_015483 25948 Hs.372541 NM_015483 ENSG00000170852 KBTBD2 BKLHD1 kelch repeat and BTB domain containing 2 protein-coding chr4-1461 chr4 156931479 156931689 + 9.31 0.000 intron (NR_036641, intron 1 of 6) intron (NR_036641, intron 1 of 6) 40215 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr4-5523 chr4 101367218 101367428 + 9.31 0.000 Intergenic L1MCa|LINE|L1 19546 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr7-3372 chr7 101588173 101588383 + 9.31 0.000 Intergenic Intergenic -19272 NR_103749 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr10-4655 chr10 125667107 125667317 + 9.31 0.000 intron (NM_001128202, intron 1 of 3) intron (NM_001128202, intron 1 of 3) 15951 NM_001128202 387718 Hs.148259 NM_001128202 ENSG00000175018 TEX36 C10orf122|bA383C5.1 testis expressed 36 protein-coding chrX-3863 chrX 2967296 2967506 + 9.31 0.000 intron (NM_001369080, intron 1 of 11) intron (NM_001369080, intron 1 of 11) 844 NM_001282631 415 Hs.386975 NM_000047 ENSG00000157399 ARSE ASE|CDPX|CDPX1|CDPXR arylsulfatase E protein-coding chr2-4124 chr2 158867595 158867805 + 9.31 0.000 Intergenic HERVE-int|LTR|ERV1 72383 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr8-6428 chr8 59223891 59224101 + 9.31 0.000 Intergenic AluSx|SINE|Alu 104786 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr1-7418 chr1 40645788 40645998 + 9.31 0.000 intron (NM_014747, intron 2 of 7) intron (NM_014747, intron 2 of 7) 19789 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr6-5753 chr6 157228580 157228790 + 9.31 0.000 Intergenic Intergenic 95574 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr11-7542 chr11 15309663 15309873 + 9.31 0.000 Intergenic Intergenic 160666 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr1-11621 chr1 235740021 235740231 + 9.31 0.000 intron (NM_000081, intron 31 of 52) intron (NM_000081, intron 31 of 52) -89372 NM_001098721 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr12-1836 chr12 27277947 27278157 + 9.31 0.000 intron (NM_015000, intron 1 of 13) intron (NM_015000, intron 1 of 13) 33766 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr11-4057 chr11 15667560 15667770 + 9.31 0.000 intron (NM_001293172, intron 1 of 2) intron (NM_001293172, intron 1 of 2) 23780 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr2-4367 chr2 23524203 23524413 + 9.31 0.000 intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 139129 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr1-9132 chr1 18621203 18621413 + 9.31 0.000 Intergenic AluJb|SINE|Alu -9538 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr3-9653 chr3 60763018 60763228 + 9.31 0.000 intron (NR_148921, intron 4 of 4) MIRc|SINE|MIR -145253 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr6-4816 chr6 81182185 81182395 + 9.31 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 570391 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr20-1857 chr20 32482723 32482933 + 9.31 0.000 intron (NM_001256798, intron 4 of 10) CpG 662 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr1-16437 chr1 226763932 226764142 + 9.31 0.000 Intergenic Intergenic -24862 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr5-7464 chr5 32673750 32673960 + 9.31 0.000 Intergenic HERV9NC-int|LTR|ERV1 -17017 NM_001364458 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr17-3534 chr17 72553822 72554032 + 9.31 0.000 intron (NR_036488, intron 1 of 3) (CA)n|Simple_repeat|Simple_repeat 38877 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr1-14546 chr1 52120579 52120789 + 9.31 0.000 Intergenic L2a|LINE|L2 -21405 NM_007324 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr2-3509 chr2 222775029 222775239 + 9.31 0.000 Intergenic Intergenic -85902 NM_001354159 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr9-6209 chr9 99977276 99977486 + 9.31 0.000 Intergenic Intergenic 70727 NM_017919 55014 Hs.704031 NM_017919 ENSG00000136874 STX17 - syntaxin 17 protein-coding chr2-2622 chr2 55112538 55112748 + 9.31 0.000 intron (NM_001321904, intron 1 of 9) intron (NM_001321904, intron 1 of 9) 25188 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr11-3121 chr11 36509419 36509629 + 9.31 0.000 intron (NM_145803, intron 1 of 7) intron (NM_145803, intron 1 of 7) 748 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chrX-1856 chrX 112637214 112637424 + 9.31 0.000 intron (NM_178175, intron 3 of 3) intron (NM_178175, intron 3 of 3) 42619 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr19-6588 chr19 24237369 24237579 + 9.31 0.000 Intergenic ALR/Alpha|Satellite|centr -74027 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo chr11-4083 chr11 27719091 27719301 + 9.31 0.000 intron (NM_170731, intron 1 of 1) CpG 370 NM_001143807 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr1-6958 chr1 157471645 157471855 + 9.31 0.000 Intergenic Intergenic 80765 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr19-4704 chr19 18745438 18745648 + 9.31 0.000 intron (NM_001098482, intron 3 of 14) intron (NM_001098482, intron 3 of 14) 45762 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr6-6743 chr6 2601010 2601220 + 9.31 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -33385 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr17-6466 chr17 17106204 17106414 + 9.31 0.000 intron (NM_201274, intron 3 of 23) intron (NM_201274, intron 3 of 23) 63549 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr8-7303 chr8 132421980 132422190 + 9.31 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 25177 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr20-1121 chr20 31730869 31731079 + 9.31 0.000 Intergenic AluY|SINE|Alu -7011 NM_001322239 598 Hs.516966 NM_001191 ENSG00000171552 BCL2L1 BCL-XL/S|BCL2L|BCLX|Bcl-X|PPP1R52 BCL2 like 1 protein-coding chr7-1944 chr7 74017068 74017278 + 9.31 0.000 Intergenic Intergenic -10616 NM_001278918 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr7-4622 chr7 26132010 26132220 + 9.31 0.000 Intergenic MER83|LTR|ERV1 -20083 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr11-3216 chr11 67500183 67500393 + 9.31 0.000 exon (NM_001130848, exon 6 of 24) exon (NM_001130848, exon 6 of 24) 5075 NM_004910 9600 Hs.372295 NM_004910 ENSG00000110697 PITPNM1 DRES9|NIR2|PITPNM|RDGB|RDGB1|RDGBA|RDGBA1|Rd9 phosphatidylinositol transfer protein membrane associated 1 protein-coding chr3-3425 chr3 121555182 121555392 + 9.31 0.000 Intergenic MSTB|LTR|ERVL-MaLR -9299 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chr10-7211 chr10 114957763 114957973 + 9.31 0.000 intron (NM_139169, intron 3 of 7) intron (NM_139169, intron 3 of 7) 19673 NM_139169 142940 Hs.21187 NM_139169 ENSG00000165832 TRUB1 PUS4 TruB pseudouridine synthase family member 1 protein-coding chr15-4562 chr15 57794791 57795001 + 9.31 0.000 Intergenic L2c|LINE|L2 88182 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr3-8109 chr3 17929567 17929777 + 9.31 0.000 Intergenic Intergenic -32880 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr5-2617 chr5 145752935 145753145 + 9.31 0.000 Intergenic Intergenic 82302 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr21-1776 chr21 37205102 37205312 + 9.31 0.000 Intergenic Intergenic -3296 NR_026719 257203 Hs.505159 NM_148675 ENSG00000230366 DSCR9 NCRNA00038 Down syndrome critical region 9 ncRNA chr22-2638 chr22 33717547 33717757 + 9.31 0.000 intron (NM_133642, intron 2 of 14) intron (NM_133642, intron 2 of 14) -7334 NR_038950 100506195 Hs.658872 NR_038949 ENSG00000224973 LARGE-AS1 - LARGE antisense RNA 1 ncRNA chr2-8763 chr2 162914505 162914715 + 9.31 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -75843 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr7-3357 chr7 94432925 94433135 + 9.31 0.000 Intergenic Intergenic 38469 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr13-4069 chr13 76129228 76129438 + 9.31 0.000 Intergenic MIR3|SINE|MIR -194201 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr17-4791 chr17 48118935 48119145 + 9.31 0.000 exon (NM_001330320, exon 6 of 7) exon (NM_001330320, exon 6 of 7) 11455 NM_013323 29916 Hs.15827 NM_013323 ENSG00000002919 SNX11 - sorting nexin 11 protein-coding chr11-7789 chr11 95148176 95148386 + 9.31 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -2258 NR_110303 101929295 Hs.735838 NR_110303 ENSG00000245552 LOC101929295 - uncharacterized LOC101929295 ncRNA chr1-2388 chr1 156114145 156114355 + 9.31 0.000 promoter-TSS (NM_170708) promoter-TSS (NM_170708) -420 NM_170708 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr6-2517 chr6 157868194 157868404 + 9.31 0.000 intron (NM_016224, intron 2 of 17) intron (NM_016224, intron 2 of 17) 45053 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr9-3616 chr9 87837558 87837768 + 9.31 0.000 Intergenic Intergenic -7082 NR_033405 1518 Hs.726015 NR_033405 CTSLP8 CTSL1P8 cathepsin L pseudogene 8 pseudo chr4-8690 chr4 181073389 181073599 + 9.31 0.000 intron (NR_033918, intron 2 of 2) intron (NR_033918, intron 2 of 2) 85655 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr2-4308 chr2 235558376 235558586 + 9.31 0.000 intron (NM_001037131, intron 1 of 17) Tigger16a|DNA|TcMar-Tigger -40560 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr22-2579 chr22 29197026 29197236 + 9.31 0.000 Intergenic L1ME4b|LINE|L1 -8765 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr4-4190 chr4 11227871 11228081 + 9.31 0.000 Intergenic Intergenic -140851 NR_030298 693157 NR_030298 ENSG00000207716 MIR572 MIRN572|hsa-mir-572 microRNA 572 ncRNA chr1-15913 chr1 185448519 185448729 + 9.31 0.000 Intergenic Intergenic -113585 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr11-9018 chr11 25590942 25591152 + 9.31 0.000 Intergenic L1PB1|LINE|L1 -598076 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr16-1324 chr16 3100255 3100465 + 9.31 0.000 Intergenic Intergenic -1066 NM_032805 84891 Hs.334515 NM_032805 ENSG00000130182 ZSCAN10 ZFP206|ZNF206 zinc finger and SCAN domain containing 10 protein-coding chr2-13479 chr2 147305884 147306094 + 9.31 0.000 Intergenic Intergenic -538528 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr10-5362 chr10 72711987 72712197 + 9.31 0.000 intron (NM_001270680, intron 1 of 7) L1ME3Cz|LINE|L1 -8937 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr7-5861 chr7 90560841 90561051 + 9.31 0.000 Intergenic L1MB7|LINE|L1 -35375 NM_001287135 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr20-3285 chr20 8219423 8219633 + 9.31 0.000 intron (NM_182734, intron 2 of 32) intron (NM_182734, intron 2 of 32) -29176 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr5-2625 chr5 159597544 159597754 + 9.31 0.000 Intergenic L2a|LINE|L2 -131373 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr17-5751 chr17 59652485 59652695 + 9.31 0.000 intron (NM_001288653, intron 5 of 31) Tigger1|DNA|TcMar-Tigger 32695 NM_004859 1213 Hs.491351 NM_004859 ENSG00000141367 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc|MRD56 clathrin heavy chain protein-coding chr4-6432 chr4 133495413 133495623 + 9.31 0.000 Intergenic Intergenic 346224 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr5-8608 chr5 138645025 138645235 + 9.31 0.000 Intergenic Intergenic -69729 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr16-4671 chr16 77769754 77769964 + 9.31 0.000 Intergenic Intergenic -18705 NM_020927 57687 Hs.461405 NM_020927 ENSG00000171724 VAT1L - vesicle amine transport 1 like protein-coding chr8-6108 chr8 27769117 27769327 + 9.31 0.000 intron (NR_156432, intron 1 of 7) intron (NR_156432, intron 1 of 7) 3418 NR_130762 55246 Hs.445512 NM_018246 ENSG00000147419 CCDC25 - coiled-coil domain containing 25 protein-coding chr16-4355 chr16 35426006 35426216 + 9.31 0.000 Intergenic Intergenic 54485 NR_026980 146481 Hs.316564 NR_026980 FRG2DP - FSHD region gene 2 family member D, pseudogene pseudo chr2-7852 chr2 48773942 48774152 + 9.31 0.000 intron (NM_001198593, intron 10 of 10) intron (NM_001198593, intron 10 of 10) -18323 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr6-2812 chr6 154767117 154767327 + 9.31 0.000 intron (NM_001286189, intron 3 of 21) Tigger2|DNA|TcMar-Tigger 33844 NM_001286188 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr2-7744 chr2 37654787 37654997 + 9.31 0.000 intron (NM_001270436, intron 1 of 1) intron (NM_001270436, intron 1 of 1) 17307 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chrX-1795 chrX 85024160 85024370 + 9.31 0.000 intron (NM_198450, intron 1 of 8) intron (NM_198450, intron 1 of 8) 20388 NM_198450 139322 Hs.512181 NM_198450 ENSG00000155008 APOOL CXorf33|FAM121A|MICOS27|Mic27|UNQ8193 apolipoprotein O like protein-coding chr13-4129 chr13 82154341 82154551 + 9.31 0.000 Intergenic Intergenic -927463 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr11-4898 chr11 58978773 58978983 + 9.31 0.000 intron (NR_033853, intron 5 of 5) intron (NR_033853, intron 5 of 5) 35629 NM_080661 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr9-1816 chr9 110651004 110651214 + 9.31 0.000 Intergenic Intergenic -17682 NM_001166281 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr20-1253 chr20 37904697 37904907 + 9.31 0.000 intron (NM_080607, intron 1 of 3) intron (NM_080607, intron 1 of 3) 1675 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr10-3553 chr10 77737810 77738020 + 9.31 0.000 Intergenic MIRc|SINE|MIR -100107 NM_001271522 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr15-1851 chr15 52853207 52853417 + 9.31 0.000 Intergenic L3|LINE|CR1 -62976 NM_004498 3175 Hs.555318 NM_004498 ENSG00000169856 ONECUT1 HNF-6|HNF6|HNF6A one cut homeobox 1 protein-coding chr16-1651 chr16 47839109 47839319 + 9.31 0.000 Intergenic HERVH-int|LTR|ERV1 -19367 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA chr10-6804 chr10 12829927 12830137 + 9.31 0.000 3' UTR (NM_153498, exon 11 of 11) 3' UTR (NM_153498, exon 11 of 11) -104679 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr1-9632 chr1 46460591 46460801 + 9.31 0.000 Intergenic Intergenic -10992 NR_121680 101929651 Hs.638707 NR_121680 ENSG00000224863 LINC01398 - long intergenic non-protein coding RNA 1398 ncRNA chr4-2456 chr4 181516488 181516698 + 9.31 0.000 Intergenic AluSp|SINE|Alu -251564 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr11-5749 chr11 2708252 2708462 + 9.31 0.000 intron (NM_181798, intron 11 of 15) intron (NM_181798, intron 11 of 15) -8359 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr18-1092 chr18 54316059 54316269 + 9.31 0.000 intron (NR_147257, intron 9 of 9) AluJo|SINE|Alu 38409 NR_138549 147323 Hs.438779 NM_139171 ENSG00000174448 STARD6 - StAR related lipid transfer domain containing 6 protein-coding chr9-4621 chr9 109587909 109588119 + 9.31 0.000 Intergenic Intergenic -52774 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr10-2686 chr10 100503097 100503307 + 9.31 0.000 intron (NM_015490, intron 10 of 25) intron (NM_015490, intron 10 of 25) 16659 NM_015490 25956 Hs.18889 NM_015490 ENSG00000075826 SEC31B SEC31B-1|SEC31L2 SEC31 homolog B, COPII coat complex component protein-coding chr17-4748 chr17 41658789 41658999 + 9.31 0.000 Intergenic Intergenic -18695 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo chr12-2808 chr12 112574224 112574434 + 9.31 0.000 promoter-TSS (NM_001347952) promoter-TSS (NM_001347952) -907 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr17-3850 chr17 44291095 44291305 + 9.31 0.000 Intergenic Intergenic 17231 NR_110802 101926996 Hs.666688 NR_110802 RUNDC3A-AS1 - RUNDC3A antisense RNA 1 ncRNA chr22-3938 chr22 37054268 37054478 + 9.31 0.000 intron (NM_024681, intron 2 of 7) intron (NM_024681, intron 2 of 7) 2637 NM_001282684 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr15-1767 chr15 66417622 66417832 + 9.31 0.000 intron (NM_002755, intron 1 of 10) intron (NM_002755, intron 1 of 10) 30854 NM_002755 5604 Hs.145442 NM_002755 ENSG00000169032 MAP2K1 CFC3|MAPKK1|MEK1|MKK1|PRKMK1 mitogen-activated protein kinase kinase 1 protein-coding chr8-4602 chr8 130409193 130409403 + 9.31 0.000 intron (NM_001362925, intron 1 of 29) intron (NM_001362925, intron 1 of 29) 34362 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr14-1193 chr14 69138197 69138407 + 9.31 0.000 intron (NM_003861, intron 1 of 8) intron (NM_003861, intron 1 of 8) 14297 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr2-2714 chr2 72214876 72215086 + 9.31 0.000 intron (NR_135773, intron 19 of 21) intron (NR_135773, intron 19 of 21) -67119 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr3-8405 chr3 103922215 103922425 + 9.31 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -398204 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr3-9627 chr3 58534737 58534947 + 9.31 0.000 intron (NM_003500, intron 2 of 14) MamTip2|DNA|hAT-Tip100 2348 NM_003500 8309 Hs.444959 NM_003500 ENSG00000168306 ACOX2 BCOX|BRCACOX|BRCOX|CBAS6|THCCox acyl-CoA oxidase 2 protein-coding chr19-3623 chr19 58513967 58514177 + 9.31 0.000 exon (NM_001316978, exon 3 of 3) exon (NM_001316978, exon 3 of 3) -2007 NM_001321196 10998 Hs.292177 NM_012254 ENSG00000083807 SLC27A5 ACSB|ACSVL6|BACS|BAL|FACVL3|FATP-5|FATP5|VLACSR|VLCS-H2|VLCSH2 solute carrier family 27 member 5 protein-coding chr5-5409 chr5 135838549 135838759 + 9.31 0.000 intron (NR_146141, intron 1 of 8) THE1B-int|LTR|ERVL-MaLR 3978 NM_145282 153328 Hs.412418 NM_145282 ENSG00000145832 SLC25A48 - solute carrier family 25 member 48 protein-coding chr6-6374 chr6 71153994 71154204 + 9.31 0.000 Intergenic Intergenic -134712 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr3-9466 chr3 50050500 50050710 + 9.31 0.000 intron (NM_001349194, intron 4 of 17) L1MB5|LINE|L1 -38314 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr6-8031 chr6 119382713 119382923 + 9.31 0.000 Intergenic L1MA3|LINE|L1 -33057 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chr11-10524 chr11 119733037 119733247 + 9.31 0.000 intron (NR_120587, intron 1 of 3) intron (NR_120587, intron 1 of 3) 3559 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr14-2780 chr14 20436478 20436688 + 9.31 0.000 promoter-TSS (NM_001365790) promoter-TSS (NM_001365790) -417 NM_001365790 123103 Hs.556014 NM_001109997 ENSG00000185271 KLHL33 - kelch like family member 33 protein-coding chr4-5298 chr4 177339907 177340117 + 9.31 0.000 intron (NM_018248, intron 5 of 9) intron (NM_018248, intron 5 of 9) 30138 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr16-1979 chr16 85809424 85809634 + 9.31 0.000 Intergenic Intergenic 9834 NM_001318802 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr17-6169 chr17 82427817 82428027 + 9.31 0.000 intron (NM_173620, intron 3 of 11) intron (NM_173620, intron 3 of 11) -9336 NM_024648 79701 Hs.187505 NM_024648 ENSG00000181396 OGFOD3 C17orf101 2-oxoglutarate and iron dependent oxygenase domain containing 3 protein-coding chr16-3115 chr16 69865904 69866114 + 9.31 0.000 intron (NM_001270453, intron 3 of 20) MER72|LTR|ERV1 27272 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr16-5069 chr16 74037366 74037576 + 9.31 0.000 Intergenic Intergenic 178050 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr1-6542 chr1 28785321 28785531 + 9.31 0.000 Intergenic AluYf1|SINE|Alu -26744 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chr6-4776 chr6 74453605 74453815 + 9.31 0.000 intron (NR_110856, intron 2 of 3) L2c|LINE|L2 384259 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr4-5085 chr4 146941787 146941997 + 9.31 0.000 intron (NR_133922, intron 2 of 13) L2a|LINE|L2 3972 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr10-6667 chr10 104750190 104750400 + 9.31 0.000 intron (NM_014978, intron 1 of 26) L3|LINE|CR1 -84079 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr6-1970 chr6 150429299 150429509 + 9.31 0.000 Intergenic Intergenic 60392 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr8-2368 chr8 37780008 37780218 + 9.31 0.000 TTS (NM_001349346) TTS (NM_001349346) -16770 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr2-12402 chr2 54878160 54878370 + 9.31 0.000 intron (NM_001039753, intron 15 of 40) intron (NM_001039753, intron 15 of 40) 132007 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr13-1421 chr13 38849520 38849730 + 9.31 0.000 intron (NM_207361, intron 8 of 23) intron (NM_207361, intron 8 of 23) -22034 NR_146963 100874073 Hs.253994 NR_146963 FREM2-AS1 - FREM2 antisense RNA 1 ncRNA chr1-8003 chr1 214525132 214525342 + 9.31 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 26365 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr15-2717 chr15 93206399 93206609 + 9.31 0.000 exon (NM_001365393, exon 1 of 1) exon (NM_001365393, exon 1 of 1) 438 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr6-7279 chr6 43328491 43328701 + 9.31 0.000 Intergenic Intergenic -19770 NM_001366068 401262 Hs.653165 NM_206922 ENSG00000146215 CRIP3 CRP-3|TLP|TLP-A|h6LIMo cysteine rich protein 3 protein-coding chr5-1093 chr5 80256490 80256700 + 9.31 0.000 promoter-TSS (NM_001174071) promoter-TSS (NM_001174071) -547 NM_001174071 256987 Hs.288232 NM_178276 ENSG00000164300 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding chr2-13749 chr2 169865854 169866064 + 9.31 0.000 intron (NM_172070, intron 1 of 38) AluSx|SINE|Alu 38451 NM_172070 130507 Hs.379548 NM_172070 ENSG00000144357 UBR3 ZNF650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding chr6-7667 chr6 84645858 84646068 + 9.31 0.000 Intergenic Intergenic -43495 NR_125875 102724201 Hs.667523 NR_125875 ENSG00000228290 TBX18-AS1 - TBX18 antisense RNA 1 ncRNA chr19-6168 chr19 4588293 4588503 + 9.31 0.000 Intergenic L1MB3|LINE|L1 -28714 NM_032108 10501 Hs.465642 NM_020241 ENSG00000167680 SEMA6B SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ semaphorin 6B protein-coding chr12-4654 chr12 45997914 45998124 + 9.31 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -7445 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr9-8380 chr9 118331740 118331950 + 9.31 0.000 Intergenic Intergenic -347826 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr2-2845 chr2 131673897 131674107 + 9.31 0.000 Intergenic CpG -8497 NM_001354872 29798 Hs.635289 NM_013310 C2orf27A C2orf27|C2orf27B chromosome 2 open reading frame 27A protein-coding chr6-2746 chr6 105587235 105587445 + 9.31 0.000 Intergenic Intergenic -184258 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr5-8250 chr5 111502984 111503194 + 9.31 0.000 intron (NM_001308061, intron 2 of 4) intron (NM_001308061, intron 2 of 4) -9137 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr8-1855 chr8 6559803 6560013 + 9.31 0.000 intron (NM_001147, intron 1 of 8) intron (NM_001147, intron 1 of 8) 3337 NM_001147 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr2-11204 chr2 159606275 159606485 + 9.31 0.000 intron (NM_001329857, intron 1 of 36) intron (NM_001329857, intron 1 of 36) -8914 NR_110587 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA chr17-1415 chr17 79925466 79925676 + 9.31 0.000 intron (NR_110850, intron 1 of 5) intron (NR_110850, intron 1 of 5) 1154 NR_110850 101928766 Hs.630666 NR_110850 ENSG00000262585 LINC01979 - long intergenic non-protein coding RNA 1979 ncRNA chr7-9273 chr7 124565014 124565224 + 9.31 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 200673 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr8-5436 chr8 36445513 36445723 + 9.31 0.000 Intergenic AluSz|SINE|Alu -338756 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr3-3413 chr3 89520895 89521105 + 9.31 0.000 Intergenic MER21C|LTR|ERVL 413379 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr9-4764 chr9 132833999 132834209 + 9.31 0.000 intron (NM_001317959, intron 6 of 14) intron (NM_001317959, intron 6 of 14) -44240 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr1-5710 chr1 64849010 64849220 + 9.31 0.000 intron (NM_002227, intron 12 of 24) intron (NM_002227, intron 12 of 24) 104040 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr4-4534 chr4 68166031 68166241 + 9.31 0.000 Intergenic Intergenic -16156 NR_015446 100130017 Hs.582037 NR_015446 ENSG00000250426 FTLP10 - ferritin light chain pseudogene 10 pseudo chr5-8452 chr5 130045144 130045354 + 9.31 0.000 intron (NM_175856, intron 2 of 2) L2|LINE|L2 140784 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr4-4542 chr4 70726110 70726320 + 9.31 0.000 intron (NM_014961, intron 1 of 12) L2|LINE|L2 4251 NM_001291994 22902 Hs.740904 NM_014961 ENSG00000018189 RUFY3 RIPX|SINGAR1|ZFYVE30 RUN and FYVE domain containing 3 protein-coding chr4-1471 chr4 2477973 2478183 + 9.31 0.000 intron (NM_001185009, intron 2 of 8) THE1B-int|LTR|ERVL-MaLR 8625 NM_001185009 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr15-3252 chr15 75551072 75551282 + 9.31 0.000 intron (NM_002833, intron 1 of 12) FLAM_A|SINE|Alu 28138 NM_002833 5780 Hs.445775 NM_002833 ENSG00000169410 PTPN9 MEG2|PTPMEG2 protein tyrosine phosphatase non-receptor type 9 protein-coding chr11-5803 chr11 6333177 6333387 + 9.31 0.000 Intergenic MIR|SINE|MIR -12781 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr8-3499 chr8 107621867 107622077 + 9.31 0.000 Intergenic L3|LINE|CR1 -124054 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr19-6637 chr19 32653368 32653578 + 9.31 0.000 intron (NM_032139, intron 2 of 28) intron (NM_032139, intron 2 of 28) 21707 NM_032139 84079 Hs.59236 NM_032139 ENSG00000105186 ANKRD27 PP12899|VARP ankyrin repeat domain 27 protein-coding chr9-4516 chr9 70421937 70422147 + 9.31 0.000 Intergenic L2a|LINE|L2 -7385 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr17-7336 chr17 5915261 5915471 + 9.31 0.000 intron (NR_040000, intron 3 of 3) L3|LINE|CR1 143132 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr6-5395 chr6 154319660 154319870 + 9.31 0.000 intron (NM_001130699, intron 1 of 12) intron (NM_001130699, intron 1 of 12) 10316 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr3-2034 chr3 113914626 113914836 + 9.31 0.000 intron (NM_001172105, intron 4 of 12) MIR|SINE|MIR 17231 NM_001172105 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr12-4899 chr12 65868371 65868581 + 9.31 0.000 intron (NR_158984, intron 1 of 2) intron (NR_158984, intron 1 of 2) 13102 NR_120478 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr20-2108 chr20 31790462 31790672 + 9.31 0.000 intron (NM_012112, intron 12 of 17) MARNA|DNA|TcMar-Mariner -28808 NM_033118 85366 Hs.86092 NM_033118 ENSG00000101306 MYLK2 KMLC|MLCK|MLCK2|skMLCK myosin light chain kinase 2 protein-coding chr13-2773 chr13 99552907 99553117 + 9.31 0.000 intron (NM_004800, intron 13 of 16) intron (NM_004800, intron 13 of 16) -24100 NR_126390 104355149 Hs.639387 NR_126390 LINC01039 - long intergenic non-protein coding RNA 1039 ncRNA chr6-6108 chr6 152471900 152472110 + 9.31 0.000 intron (NM_182961, intron 15 of 145) intron (NM_182961, intron 15 of 145) 91475 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr7-2587 chr7 130943413 130943623 + 9.31 0.000 TTS (NR_015431) TTS (NR_015431) 30054 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chrX-3233 chrX 65788720 65788930 + 9.31 0.000 Intergenic Intergenic 121171 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr14-4507 chr14 38207402 38207612 + 9.31 0.000 promoter-TSS (NM_001049) promoter-TSS (NM_001049) -397 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr5-1992 chr5 169803037 169803247 + 9.31 0.000 exon (NM_004946, exon 26 of 52) exon (NM_004946, exon 26 of 52) 165867 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr3-5884 chr3 37726019 37726229 + 9.31 0.000 intron (NM_002207, intron 18 of 27) intron (NM_002207, intron 18 of 27) 135656 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr17-6958 chr17 44485113 44485323 + 9.31 0.000 intron (NM_001002909, intron 1 of 7) AluJr|SINE|Alu 18188 NM_001304942 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr5-5477 chr5 139765683 139765893 + 9.31 0.000 Intergenic CpG -19565 NR_105052 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr7-5464 chr7 40880735 40880945 + 9.31 0.000 Intergenic Intergenic 99099 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr18-786 chr18 44733361 44733571 + 9.31 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 52578 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr6-6392 chr6 79468268 79468478 + 9.31 0.000 Intergenic Intergenic 69057 NM_001122769 167691 Hs.21945 NM_181714 ENSG00000135338 LCA5 C6orf152 lebercilin LCA5 protein-coding chr1-6498 chr1 23202240 23202450 + 9.31 0.000 Intergenic AluSz|SINE|Alu -7616 NM_000864 3352 Hs.121482 NM_000864 ENSG00000179546 HTR1D 5-HT1D|HT1DA|HTR1DA|HTRL|RDC4 5-hydroxytryptamine receptor 1D protein-coding chr5-2587 chr5 79237621 79237831 + 9.31 0.000 intron (NM_152405, intron 1 of 10) intron (NM_152405, intron 1 of 10) 1595 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr13-4066 chr13 76023058 76023268 + 9.31 0.000 Intergenic Intergenic -88031 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr7-1479 chr7 121711401 121711611 + 9.31 0.000 Intergenic L1P2|LINE|L1 -161655 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr21-1569 chr21 14086617 14086827 + 9.31 0.000 Intergenic Intergenic -106278 NR_027270 391267 Hs.364456 NM_153750 ENSG00000215559 ANKRD20A11P C21orf81 ankyrin repeat domain 20 family member A11, pseudogene pseudo chr2-7382 chr2 6403744 6403954 + 9.31 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -28427 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr22-1057 chr22 50210051 50210261 + 9.31 0.000 intron (NM_031454, intron 3 of 8) intron (NM_031454, intron 3 of 8) 9145 NM_031454 83642 Hs.365405 NM_031454 ENSG00000073169 SELENOO SELO selenoprotein O protein-coding chr3-3829 chr3 27194338 27194548 + 9.31 0.000 intron (NM_001304384, intron 4 of 16) intron (NM_001304384, intron 4 of 16) 22080 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr3-2720 chr3 88113591 88113801 + 9.31 0.000 intron (NM_001350135, intron 3 of 6) intron (NM_001350135, intron 3 of 6) 36170 NM_001195308 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding chr9-3923 chr9 134963127 134963337 + 9.31 0.000 Intergenic Intergenic -45320 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr10-3384 chr10 26755514 26755724 + 9.31 0.000 intron (NM_001178125, intron 5 of 6) intron (NM_001178125, intron 5 of 6) 57918 NM_014317 23590 Hs.558468 NM_014317 ENSG00000148459 PDSS1 COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 decaprenyl diphosphate synthase subunit 1 protein-coding chr1-14031 chr1 27283436 27283646 + 9.31 0.000 intron (NM_001276252, intron 5 of 15) intron (NM_001276252, intron 5 of 15) -38604 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding chr15-1511 chr15 52683753 52683963 + 9.31 0.000 Intergenic Intergenic -5224 NR_104457 56204 Hs.152385 NM_019600 ENSG00000047346 FAM214A KIAA1370 family with sequence similarity 214 member A protein-coding chr13-4286 chr13 98537082 98537292 + 9.31 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) -15062 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr1-5076 chr1 108719849 108720059 + 9.31 0.000 intron (NM_001144937, intron 4 of 12) intron (NM_001144937, intron 4 of 12) 7046 NM_001144937 163479 Hs.258253 NM_173532 ENSG00000143107 FNDC7 - fibronectin type III domain containing 7 protein-coding chr12-6626 chr12 173300 173510 + 9.31 0.000 intron (NM_001170738, intron 13 of 13) intron (NM_001170738, intron 13 of 13) -24236 NR_033859 574538 Hs.589138 NR_033859 ENSG00000249695 LOC574538 - uncharacterized LOC574538 ncRNA chr1-12827 chr1 88823050 88823260 + 9.31 0.000 intron (NM_006256, intron 17 of 21) AluJb|SINE|Alu 68412 NM_001514 2959 Hs.481852 NM_001514 ENSG00000137947 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding chr15-1312 chr15 67085829 67086039 + 9.31 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) 20332 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr5-8214 chr5 108024993 108025203 + 9.31 0.000 intron (NM_001163315, intron 6 of 8) intron (NM_001163315, intron 6 of 8) -354161 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr3-10592 chr3 143276977 143277187 + 9.31 0.000 intron (NM_173653, intron 14 of 15) intron (NM_173653, intron 14 of 15) -65164 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr7-5175 chr7 7046295 7046505 + 9.31 0.000 Intergenic AluSx|SINE|Alu 20645 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr2-13571 chr2 156032939 156033149 + 9.31 0.000 intron (NR_110250, intron 1 of 3) intron (NR_110250, intron 1 of 3) 221887 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr11-2841 chr11 1783092 1783302 + 9.31 0.000 Intergenic Intergenic -19270 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr17-2731 chr17 75603329 75603539 + 9.31 0.000 intron (NM_001309242, intron 18 of 62) intron (NM_001309242, intron 18 of 62) 15376 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr11-7801 chr11 99522537 99522747 + 9.31 0.000 intron (NM_001243271, intron 2 of 20) intron (NM_001243271, intron 2 of 20) -33503 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr4-6022 chr4 1353205 1353415 + 9.31 0.000 exon (NM_001317934, exon 5 of 14) exon (NM_001317934, exon 5 of 14) 5754 NM_001317935 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chr3-10946 chr3 175956835 175957045 + 9.31 0.000 Intergenic MER88|LTR|ERVL -180607 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr2-3718 chr2 229872471 229872681 + 9.31 0.000 intron (NM_001348330, intron 2 of 41) AluSx1|SINE|Alu 49103 NM_001348334 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr12-2896 chr12 48966538 48966748 + 9.31 0.000 intron (NM_003394, intron 4 of 4) (ACAGAAC)n|Simple_repeat|Simple_repeat 5092 NM_003394 7480 Hs.91985 NM_003394 ENSG00000169884 WNT10B SHFM6|STHAG8|WNT-12 Wnt family member 10B protein-coding chr9-3717 chr9 112903012 112903222 + 9.31 0.000 Intergenic Intergenic -12241 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chrX-1339 chrX 135100646 135100856 + 9.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR -2039 NM_001348255 644596 Hs.656427 NM_001348255 ENSG00000196972 SMIM10L2B LINC00086|LINC00087|NCRNA00086|NCRNA00087|SMIM10L2A small integral membrane protein 10 like 2B protein-coding chr14-1638 chr14 105014299 105014509 + 9.31 0.000 intron (NM_017955, intron 1 of 1) intron (NM_017955, intron 1 of 1) 6679 NM_017955 55038 Hs.34045 NM_017955 ENSG00000170779 CDCA4 HEPP|SEI-3/HEPP cell division cycle associated 4 protein-coding chrX-4809 chrX 100680872 100681082 + 9.31 0.000 intron (NM_001370164, intron 15 of 17) intron (NM_001370164, intron 15 of 17) 36778 NM_014467 27286 Hs.306339 NM_014467 ENSG00000102359 SRPX2 BPP|CBPS|PMGX|RESDX|SRPUL sushi repeat containing protein X-linked 2 protein-coding chr9-3091 chr9 34160795 34161005 + 9.31 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -18105 NM_001171202 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr12-4610 chr12 39989090 39989300 + 9.31 0.000 intron (NM_052885, intron 3 of 9) L2a|LINE|L2 116886 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr19-2698 chr19 18514079 18514289 + 9.31 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 7886 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr6-3336 chr6 8662720 8662930 + 9.31 0.000 intron (NR_038980, intron 3 of 4) intron (NR_038980, intron 3 of 4) 10616 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr2-3966 chr2 69798957 69799167 + 9.31 0.000 intron (NM_001320700, intron 3 of 12) LTR19C|LTR|ERV1 -30598 NM_178439 64395 Hs.293971 NM_178439 ENSG00000087338 GMCL1 BTBD13|GCL|GCL1|SPATA29 germ cell-less 1, spermatogenesis associated protein-coding chr1-15096 chr1 99331735 99331945 + 9.31 0.000 Intergenic THE1C|LTR|ERVL-MaLR 67548 NM_001166252 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chr5-8631 chr5 139742770 139742980 + 9.31 0.000 intron (NR_105053, intron 2 of 2) intron (NR_105053, intron 2 of 2) 3348 NR_105053 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr3-3520 chr3 30689277 30689487 + 9.31 0.000 intron (NM_001024847, intron 7 of 7) intron (NM_001024847, intron 7 of 7) 82781 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr12-2573 chr12 113040793 113041003 + 9.31 0.000 Intergenic Intergenic -16959 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 RNF140|hDx-1 deltex E3 ubiquitin ligase 1 protein-coding chr6-3376 chr6 41622546 41622756 + 9.31 0.000 Intergenic L1MEc|LINE|L1 -14367 NM_001300804 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding chr5-1975 chr5 139764953 139765163 + 9.31 0.000 Intergenic Intergenic -18835 NR_105052 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr6-4330 chr6 16799506 16799716 + 9.31 0.000 Intergenic Intergenic -38121 NM_001128164 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr3-3730 chr3 187764635 187764845 + 9.31 0.000 Intergenic Intergenic -19272 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr1-8552 chr1 165218898 165219108 + 9.31 0.000 intron (NM_177398, intron 4 of 8) intron (NM_177398, intron 4 of 8) 137238 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr2-9231 chr2 218426901 218427111 + 9.31 0.000 intron (NM_007127, intron 4 of 19) AluJo|SINE|Alu 7883 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding chrX-3981 chrX 13904954 13905164 + 9.31 0.000 intron (NM_001318729, intron 1 of 6) AluJo|SINE|Alu 33579 NM_001001994 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr12-1801 chr12 132054609 132054819 + 9.31 0.000 intron (NM_015409, intron 43 of 52) L2a|LINE|L2 23490 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr3-9156 chr3 33030266 33030476 + 9.31 0.000 intron (NM_001079811, intron 10 of 15) intron (NM_001079811, intron 10 of 15) 66461 NM_001079811 2720 Hs.443031 NM_000404 ENSG00000170266 GLB1 EBP|ELNR1|MPS4B galactosidase beta 1 protein-coding chr7-3783 chr7 85175291 85175501 + 9.31 0.000 Intergenic Intergenic -53465 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr2-13251 chr2 126840140 126840350 + 9.31 0.000 Intergenic Intergenic -58645 NM_001322244 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr6-3841 chr6 40605778 40605988 + 9.31 0.000 Intergenic L2|LINE|L2 -18519 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr9-1620 chr9 130194185 130194395 + 9.31 0.000 intron (NM_014286, intron 1 of 7) intron (NM_014286, intron 1 of 7) -6110 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr3-7210 chr3 191739524 191739734 + 9.31 0.000 Intergenic HERVP71A-int|LTR|ERV1 278466 NM_001083308 152138 Hs.690618 NM_001083308 ENSG00000253548 PYDC2 POP2|cPOP2 pyrin domain containing 2 protein-coding chr10-5672 chr10 98676958 98677168 + 9.31 0.000 intron (NM_021828, intron 6 of 11) intron (NM_021828, intron 6 of 11) -230100 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr6-5542 chr6 168716138 168716348 + 9.31 0.000 Intergenic Intergenic 248139 NR_136249 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr5-6416 chr5 151428442 151428652 + 9.31 0.000 Intergenic Intergenic -8499 NM_001308151 206358 Hs.269004 NM_078483 ENSG00000123643 SLC36A1 Dct1|LYAAT1|PAT1|TRAMD3 solute carrier family 36 member 1 protein-coding chr17-8075 chr17 53525155 53525365 + 9.31 0.000 Intergenic L1MB5|LINE|L1 -297667 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr13-4249 chr13 97009022 97009232 + 9.31 0.000 Intergenic L1PB4|LINE|L1 -14397 NM_001346195 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding chr22-3144 chr22 24703888 24704098 + 9.31 0.000 Intergenic AluSx1|SINE|Alu -44846 NR_024593 646074 Hs.531306 NM_001025230 POM121L10P - POM121 transmembrane nucleoporin like 10, pseudogene pseudo chr1-8771 chr1 1151198 1151408 + 9.31 0.000 Intergenic Intergenic 14286 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA chr1-12818 chr1 86993050 86993260 + 9.31 0.000 intron (NM_012262, intron 1 of 6) MER39|LTR|ERV1 78520 NM_001134492 9653 Hs.743280 NM_012262 ENSG00000153936 HS2ST1 dJ604K5.2 heparan sulfate 2-O-sulfotransferase 1 protein-coding chr14-2375 chr14 36242989 36243199 + 9.31 0.000 Intergenic L2a|LINE|L2 -66443 NR_049735 100886964 Hs.742592 NR_049735 PTCSC3 - papillary thyroid carcinoma susceptibility candidate 3 ncRNA chrX-4225 chrX 38180409 38180619 + 9.31 0.000 intron (NM_006307, intron 1 of 9) L2|LINE|L2 40357 NM_006307 8406 Hs.15154 NM_006307 ENSG00000101955 SRPX DRS|ETX1|HEL-S-83p|SRPX1 sushi repeat containing protein X-linked protein-coding chr5-4525 chr5 14956654 14956864 + 9.31 0.000 Intergenic Intergenic -84981 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr17-4134 chr17 82056591 82056801 + 9.31 0.000 TTS (NM_022156) TTS (NM_022156) 4798 NM_001330539 2873 Hs.268530 NM_004127 ENSG00000169727 GPS1 COPS1|CSN1|SGN1 G protein pathway suppressor 1 protein-coding chr7-8181 chr7 30818580 30818790 + 9.31 0.000 intron (NR_037598, intron 7 of 19) L1MEd|LINE|L1 47268 NM_032222 84182 Hs.660192 NM_032222 ENSG00000106125 MINDY4 AQP-1|AQP1|C7orf67|CHIP28|FAM188B MINDY lysine 48 deubiquitinase 4 protein-coding chr3-3148 chr3 167728298 167728508 + 9.31 0.000 intron (NM_145859, intron 1 of 8) intron (NM_145859, intron 1 of 8) 6439 NM_145860 11235 Hs.478150 NM_007217 ENSG00000114209 PDCD10 CCM3|TFAR15 programmed cell death 10 protein-coding chr7-3442 chr7 824374 824584 + 9.31 0.000 intron (NM_001367651, intron 2 of 21) intron (NM_001367651, intron 2 of 21) 7836 NM_001367696 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chrX-4667 chrX 82316746 82316956 + 9.31 0.000 Intergenic Intergenic 1114749 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr3-4861 chr3 161311233 161311443 + 9.31 0.000 Intergenic L2a|LINE|L2 60745 NM_001040100 165679 Hs.369104 NM_145035 ENSG00000196542 SPTSSB ADMP|C3orf57|SSSPTB serine palmitoyltransferase small subunit B protein-coding chr1-4359 chr1 108559949 108560159 + 9.31 0.000 promoter-TSS (NM_001010883) promoter-TSS (NM_001010883) -46 NM_001010883 284611 Hs.200230 NM_001010883 ENSG00000162636 FAM102B SYM-3B family with sequence similarity 102 member B protein-coding chr2-4876 chr2 112482860 112483070 + 9.31 0.000 intron (NM_153712, intron 1 of 6) CpG 809 NM_153712 150465 Hs.358997 NM_153712 ENSG00000114999 TTL - tubulin tyrosine ligase protein-coding chr13-2082 chr13 68188472 68188682 + 9.31 0.000 Intergenic Intergenic 696748 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr1-16302 chr1 215476010 215476220 + 9.31 0.000 Intergenic MamRTE1|LINE|RTE-BovB -91189 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr18-580 chr18 10454868 10455078 + 9.31 0.000 5' UTR (NM_153000, exon 1 of 5) 5' UTR (NM_153000, exon 1 of 5) 338 NM_153000 147495 Hs.293274 NM_153000 ENSG00000154856 APCDD1 B7323|DRAPC1|FP7019|HHS|HTS|HYPT1 APC down-regulated 1 protein-coding chr12-5299 chr12 111337655 111337865 + 9.31 0.000 intron (NM_015267, intron 19 of 21) AluSx|SINE|Alu 31335 NM_001177996 144717 Hs.173088 NM_144671 ENSG00000198324 PHETA1 FAM109A|IPIP27A|SES1 PH domain containing endocytic trafficking adaptor 1 protein-coding chr4-4838 chr4 109427707 109427917 + 9.31 0.000 Intergenic Charlie17a|DNA|hAT-Charlie -5903 NM_001318085 10427 Hs.292472 NM_006323 ENSG00000138802 SEC24B SEC24 SEC24 homolog B, COPII coat complex component protein-coding chr12-7944 chr12 109338256 109338466 + 9.31 0.000 Intergenic Intergenic 21127 NR_120462 101928138 Hs.143843 NR_120462 ENSG00000256560 LINC01486 - long intergenic non-protein coding RNA 1486 ncRNA chr16-6794 chr16 78455282 78455492 + 9.31 0.000 intron (NM_001291997, intron 7 of 7) AluSx|SINE|Alu 355733 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr2-5198 chr2 38783912 38784122 + 9.31 0.000 3' UTR (NM_024775, exon 3 of 3) 3' UTR (NM_024775, exon 3 of 3) 5807 NM_024775 79833 Hs.143818 NM_024775 ENSG00000152147 GEMIN6 - gem nuclear organelle associated protein 6 protein-coding chr10-6082 chr10 131254618 131254828 + 9.31 0.000 intron (NM_174937, intron 4 of 11) intron (NM_174937, intron 4 of 11) 56998 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr10-3376 chr10 23804547 23804757 + 9.31 0.000 intron (NM_001098500, intron 1 of 18) intron (NM_001098500, intron 1 of 18) 109925 NM_001098500 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr2-4769 chr2 26827239 26827449 + 9.31 0.000 Intergenic Intergenic -20788 NM_020134 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr2-8844 chr2 173086862 173087072 + 9.31 0.000 intron (NM_133646, intron 1 of 11) intron (NM_133646, intron 1 of 11) 11121 NM_016653 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr12-6970 chr12 28787027 28787237 + 9.31 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -362146 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr6-4161 chr6 741740 741950 + 9.31 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -48704 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr6-5812 chr6 16472339 16472549 + 9.31 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 233857 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chrX-1072 chrX 133702866 133703076 + 9.31 0.000 intron (NM_001164619, intron 2 of 6) intron (NM_001164619, intron 2 of 6) -194472 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr10-4851 chr10 14432659 14432869 + 9.31 0.000 Intergenic Intergenic -3812 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA chr4-8177 chr4 130748064 130748274 + 9.31 0.000 Intergenic Intergenic 371808 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA KI270787.1-1 KI270787.1 68184 68394 + 9.31 0.000 NA NA NA NA chr7-3209 chr7 129993446 129993656 + 9.31 0.000 Intergenic MARNA|DNA|TcMar-Mariner -40591 NM_001202498 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr1-5058 chr1 94912868 94913078 + 9.31 0.000 intron (NM_001839, intron 1 of 6) intron (NM_001839, intron 1 of 6) 12835 NM_001286056 1266 Hs.483454 NM_001839 ENSG00000117519 CNN3 - calponin 3 protein-coding chr3-4125 chr3 115438406 115438616 + 9.31 0.000 Intergenic LTR16|LTR|ERVL -184999 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chrX-954 chrX 79792866 79793076 + 9.31 0.000 Intergenic L1PB3|LINE|L1 -221782 NM_001109879 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr1-11787 chr1 24140507 24140717 + 9.31 0.000 intron (NM_021258, intron 1 of 6) intron (NM_021258, intron 1 of 6) 2528 NM_021258 58985 Hs.110915 NM_021258 ENSG00000142677 IL22RA1 CRF2-9|IL22R|IL22R1 interleukin 22 receptor subunit alpha 1 protein-coding chr6-5428 chr6 157244190 157244400 + 9.31 0.000 Intergenic Intergenic 79964 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr11-3944 chr11 419520 419730 + 9.31 0.000 exon (NM_001012302, exon 20 of 23) exon (NM_001012302, exon 20 of 23) -2228 NM_001135053 59307 Hs.501624 NM_021805 ENSG00000185187 SIGIRR IL-1R8|TIR8 single Ig and TIR domain containing protein-coding chr9-6154 chr9 68356460 68356670 + 9.31 0.000 promoter-TSS (NM_021965) promoter-TSS (NM_021965) -46 NM_021965 5239 Hs.307835 NM_021965 ENSG00000154330 PGM5 PGMRP phosphoglucomutase 5 protein-coding chr16-4182 chr16 10871025 10871235 + 9.31 0.000 Intergenic MIRb|SINE|MIR -6068 NM_000246 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding chr14-2265 chr14 21503560 21503770 + 9.31 0.000 exon (NM_019852, exon 2 of 11) exon (NM_019852, exon 2 of 11) 7675 NM_019852 56339 Hs.168799 NM_019852 ENSG00000165819 METTL3 IME4|M6A|MT-A70|Spo8|hMETTL3 methyltransferase like 3 protein-coding chr9-2000 chr9 128405340 128405550 + 9.31 0.000 intron (NR_031672, intron 2 of 2).4 intron (NR_031672, intron 2 of 2).4 -12731 NR_029837 407003 NR_029837 ENSG00000284185 MIR219A2 MIR219-2|MIRN219-2|hsa-mir-219a-2|mir-219a-2 microRNA 219a-2 ncRNA chr11-5617 chr11 117948516 117948726 + 9.31 0.000 Intergenic L1MC3|LINE|L1 -19168 NM_001206790 84000 Hs.266308 NM_032046 ENSG00000137747 TMPRSS13 MSP|MSPL|MSPS|TMPRSS11 transmembrane serine protease 13 protein-coding chr3-6263 chr3 70603189 70603399 + 9.31 0.000 Intergenic LTR16E2|LTR|ERVL -290656 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr16-4565 chr16 66898430 66898640 + 9.31 0.000 Intergenic MER6A|DNA|TcMar-Tigger 18020 NM_001329929 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr12-3136 chr12 41967634 41967844 + 9.31 0.000 Intergenic Intergenic 177135 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr19-3888 chr19 36605448 36605658 + 9.31 0.000 promoter-TSS (NR_027239) promoter-TSS (NR_027239) 240 NM_001256838 84911 Hs.631591 NM_032825 ENSG00000161298 ZNF382 KS1 zinc finger protein 382 protein-coding chr17-2535 chr17 31560887 31561097 + 9.31 0.000 TTS (NR_029710) TTS (NR_029710) 996 NR_029710 406968 NR_029710 ENSG00000207614 MIR193A MIRN193|MIRN193A|mir-193a microRNA 193a ncRNA chr4-2831 chr4 43383576 43383786 + 9.31 0.000 Intergenic (TGTA)n|Simple_repeat|Simple_repeat 108862 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr1-14681 chr1 61838740 61838950 + 9.31 0.000 intron (NM_001350145, intron 17 of 43) intron (NM_001350145, intron 17 of 43) -7230 NR_162146 113219465 NR_162146 MIR12132 - microRNA 12132 ncRNA chr11-2792 chr11 79461026 79461236 + 9.31 0.000 Intergenic Intergenic -20101 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr4-6249 chr4 69063459 69063669 + 9.31 0.000 intron (NM_001349568, intron 1 of 6) HERV3-int|LTR|ERV1 12300 NM_001349568 7364 Hs.654424 NM_001074 ENSG00000171234 UGT2B7 UDPGT 2B7|UDPGT 2B9|UDPGT2B7|UDPGTH2|UDPGTh-2|UGT2B9 UDP glucuronosyltransferase family 2 member B7 protein-coding chr17-8088 chr17 55486376 55486586 + 9.31 0.000 Intergenic Intergenic -64646 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr18-1128 chr18 2935299 2935509 + 9.31 0.000 intron (NM_014646, intron 7 of 19) L1MC5a|LINE|L1 11219 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo chr15-2586 chr15 59962337 59962547 + 9.31 0.000 Intergenic AluSx|SINE|Alu -41869 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr7-9705 chr7 155540704 155540914 + 9.31 0.000 intron (NM_001369813, intron 2 of 4) intron (NM_001369813, intron 2 of 4) -6947 NR_163157 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr11-2751 chr11 46976353 46976563 + 9.31 0.000 intron (NM_001278222, intron 1 of 7) intron (NM_001278222, intron 1 of 7) 39697 NM_001003677 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr7-4330 chr7 41891738 41891948 + 9.31 0.000 Intergenic Intergenic -188753 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr18-3156 chr18 41997293 41997503 + 9.31 0.000 intron (NM_001308020, intron 8 of 23) intron (NM_001308020, intron 8 of 23) 42164 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr6-8222 chr6 136050579 136050789 + 9.31 0.000 intron (NR_149042, intron 3 of 3) intron (NR_149042, intron 3 of 3) 22143 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr22-3210 chr22 38346730 38346940 + 9.31 0.000 intron (NR_002821, intron 4 of 4) intron (NR_002821, intron 4 of 4) -28751 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr7-5266 chr7 20783568 20783778 + 9.31 0.000 3' UTR (NM_182700, exon 2 of 2) 3' UTR (NM_182700, exon 2 of 2) 3213 NM_182700 221833 Hs.195922 NM_182700 ENSG00000164651 SP8 BTD Sp8 transcription factor protein-coding chr6-4391 chr6 25223699 25223909 + 9.31 0.000 Intergenic Intergenic 37603 NR_110862 101928663 Hs.561600 NR_110862 LOC101928663 - uncharacterized LOC101928663 ncRNA chr19-3222 chr19 56172015 56172225 + 9.31 0.000 Intergenic Intergenic -3888 NM_033106 85569 Hs.283915 NM_033106 ENSG00000197487 GALP - galanin like peptide protein-coding chr11-6957 chr11 113452126 113452336 + 9.31 0.000 intron (NM_016574, intron 1 of 6) intron (NM_016574, intron 1 of 6) -2143 NR_036183 100422855 NR_036183 ENSG00000265140 MIR4301 - microRNA 4301 ncRNA chr17-2937 chr17 55783999 55784209 + 9.31 0.000 intron (NM_001330378, intron 5 of 5) intron (NM_001330378, intron 5 of 5) 32999 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr10-7133 chr10 100490546 100490756 + 9.31 0.000 intron (NM_015490, intron 20 of 25) intron (NM_015490, intron 20 of 25) 27642 NM_003393 7479 Hs.421281 NM_003393 ENSG00000075290 WNT8B - Wnt family member 8B protein-coding chr10-6820 chr10 17295836 17296046 + 9.31 0.000 Intergenic Intergenic -65956 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr8-7220 chr8 126724518 126724728 + 9.31 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -166145 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chrX-2291 chrX 52248923 52249133 + 9.31 0.000 Intergenic L1ME3A|LINE|L1 58406 NR_102368 101340250 NR_102368 ENSG00000221705 SNORA11E - small nucleolar RNA, H/ACA box 11E snoRNA chr9-4059 chr9 114122124 114122334 + 9.31 0.000 Intergenic Intergenic -23172 NM_138424 113220 Hs.28149 NM_138424 ENSG00000136883 KIF12 - kinesin family member 12 protein-coding chr1-7313 chr1 248809841 248810051 + 9.31 0.000 TTS (NM_030645) TTS (NM_030645) 15420 NM_001322462 80851 Hs.298573 NM_030645 ENSG00000175137 SH3BP5L - SH3 binding domain protein 5 like protein-coding chr5-7987 chr5 84451005 84451215 + 9.31 0.000 Intergenic Intergenic -66230 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr2-8398 chr2 114314823 114315033 + 9.31 0.000 Intergenic HERVL-int|LTR|ERVL -127713 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr15-3163 chr15 68294585 68294795 + 9.31 0.000 3' UTR (NM_015322, exon 2 of 2) 3' UTR (NM_015322, exon 2 of 2) 16945 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr9-4457 chr9 23733476 23733686 + 9.31 0.000 intron (NM_004432, intron 2 of 6) intron (NM_004432, intron 2 of 6) -61182 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr1-6306 chr1 1956883 1957093 + 9.31 0.000 intron (NM_001304360, intron 16 of 38) intron (NM_001304360, intron 16 of 38) -37709 NM_178545 339456 Hs.123423 NM_178545 ENSG00000178821 TMEM52 - transmembrane protein 52 protein-coding chr1-13208 chr1 209290859 209291069 + 9.31 0.000 Intergenic Intergenic -34492 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr1-7885 chr1 116643995 116644205 + 9.31 0.000 intron (NM_001007237, intron 2 of 10) intron (NM_001007237, intron 2 of 10) 23633 NM_001007237 3321 Hs.171057 NM_001542 ENSG00000143061 IGSF3 EWI-3|LCDD|V8 immunoglobulin superfamily member 3 protein-coding chr7-2390 chr7 44755587 44755797 + 9.31 0.000 promoter-TSS (NM_174929) promoter-TSS (NM_174929) -496 NM_174929 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr7-4473 chr7 136184036 136184246 + 9.31 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -206782 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr13-3836 chr13 48638451 48638661 + 9.31 0.000 Intergenic MSTB2|LTR|ERVL-MaLR -15373 NM_001308465 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr10-7281 chr10 129970880 129971090 + 9.31 0.000 Intergenic CpG-3521 -6711 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr17-2032 chr17 29622249 29622459 + 9.31 0.000 promoter-TSS (NM_032854) promoter-TSS (NM_032854) -931 NM_032854 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chr4-3157 chr4 184384508 184384718 + 9.31 0.000 Intergenic Intergenic -2307 NR_125933 102723766 Hs.432281 NR_125933 ENSG00000249096 LINC02362 - long intergenic non-protein coding RNA 2362 ncRNA chrX-1588 chrX 82042698 82042908 + 9.31 0.000 Intergenic THE1B|LTR|ERVL-MaLR 840701 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr2-6586 chr2 230755994 230756204 + 9.31 0.000 intron (NM_001130849, intron 1 of 8) intron (NM_001130849, intron 1 of 8) 42551 NM_001130849 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr9-2686 chr9 75027523 75027733 + 9.31 0.000 promoter-TSS (NM_001320497) promoter-TSS (NM_001320497) -477 NM_001320497 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding chr12-3517 chr12 130422446 130422656 + 9.31 0.000 exon (NM_001351227, exon 15 of 21) exon (NM_001351227, exon 15 of 21) 84664 NM_004764 9271 Hs.405659 NM_004764 ENSG00000125207 PIWIL1 CT80.1|HIWI|MIWI|PIWI piwi like RNA-mediated gene silencing 1 protein-coding chr3-3678 chr3 151411157 151411367 + 9.31 0.000 intron (NM_053002, intron 38 of 42) intron (NM_053002, intron 38 of 42) -26450 NM_022788 64805 Hs.591281 NM_022788 ENSG00000169313 P2RY12 ADPG-R|BDPLT8|HORK3|P2T(AC)|P2Y(12)R|P2Y(AC)|P2Y(ADP)|P2Y(cyc)|P2Y12|SP1999 purinergic receptor P2Y12 protein-coding chr13-4405 chr13 110150800 110151010 + 9.31 0.000 intron (NM_001845, intron 51 of 51) intron (NM_001845, intron 51 of 51) 29203 NR_148221 105370361 Hs.134728 NR_148221 LOC105370361 - uncharacterized LOC105370361 ncRNA chr7-1272 chr7 127253906 127254116 + 9.31 0.000 Intergenic CpG-26351 -1070 NR_163849 chr7-6526 chr7 34638976 34639186 + 9.31 0.000 intron (NR_033664, intron 2 of 4) intron (NR_033664, intron 2 of 4) -19137 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr5-5818 chr5 177358602 177358812 + 9.31 0.000 intron (NM_006480, intron 1 of 14) intron (NM_006480, intron 1 of 14) 783 NM_006480 10636 Hs.9347 NM_006480 ENSG00000169220 RGS14 - regulator of G protein signaling 14 protein-coding chr12-8389 chr12 133227538 133227748 + 9.31 0.000 intron (NM_001191054, intron 4 of 8) intron (NM_001191054, intron 4 of 8) 8193 NM_001191054 647589 Hs.703008 NM_001191054 ENSG00000227059 ANHX - anomalous homeobox protein-coding chr1-11004 chr1 218804131 218804341 + 9.31 0.000 intron (NR_031644, intron 5 of 6) intron (NR_031644, intron 5 of 6) 114275 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chr9-5581 chr9 113180740 113180950 + 9.31 0.000 intron (NM_015258, intron 19 of 27) intron (NM_015258, intron 19 of 27) 29838 NM_001860 1318 Hs.24030 NM_001860 ENSG00000136867 SLC31A2 COPT2|CTR2|hCTR2 solute carrier family 31 member 2 protein-coding chr20-1937 chr20 19492244 19492454 + 9.31 0.000 intron (NM_020689, intron 2 of 16) MIRb|SINE|MIR -207753 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr2-4228 chr2 218222324 218222534 + 9.31 0.000 intron (NM_152862, intron 2 of 10) intron (NM_152862, intron 2 of 10) 5032 NM_005731 10109 Hs.529303 NM_005731 ENSG00000163466 ARPC2 ARC34|PNAS-139|PRO2446|p34-Arc actin related protein 2/3 complex subunit 2 protein-coding chr7-9220 chr7 118268951 118269161 + 9.31 0.000 Intergenic L1PA10|LINE|L1 44352 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr6-8483 chr6 156854604 156854814 + 9.31 0.000 intron (NM_017519, intron 2 of 18) intron (NM_017519, intron 2 of 18) -74978 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr8-3537 chr8 120593121 120593331 + 9.31 0.000 intron (NM_021021, intron 3 of 6) MamRep1894|DNA|hAT 147807 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr2-12943 chr2 102352005 102352215 + 9.31 0.000 TTS (NM_016232) TTS (NM_016232) -3686 NM_001371420 chrX-5354 chrX 149229916 149230126 + 9.31 0.000 Intergenic L1PA10|LINE|L1 275285 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr9-7230 chr9 1744990 1745200 + 9.31 0.000 Intergenic Intergenic -270252 NM_001289397 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr3-3858 chr3 36958773 36958983 + 9.31 0.000 Intergenic Intergenic -13824 NM_014831 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding chr7-9432 chr7 133829402 133829612 + 9.31 0.000 intron (NM_021807, intron 11 of 17) intron (NM_021807, intron 11 of 17) -4619 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr11-8476 chr11 118168707 118168917 + 9.31 0.000 intron (NM_004588, intron 1 of 3) intron (NM_004588, intron 1 of 3) 7827 NM_004588 6327 Hs.129783 NM_004588 ENSG00000149575 SCN2B ATFB14 sodium voltage-gated channel beta subunit 2 protein-coding KI270589.1-3 KI270589.1 43711 43921 + 9.31 0.000 NA NA NA NA chr4-7119 chr4 35907949 35908159 + 9.31 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 335885 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr10-2522 chr10 47167365 47167575 + 9.31 0.000 Intergenic AluY|SINE|Alu -132727 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr12-2069 chr12 122888290 122888500 + 9.31 0.000 intron (NM_024667, intron 1 of 3) intron (NM_024667, intron 1 of 3) 7729 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chrX-1479 chrX 128123791 128124001 + 9.31 0.000 Intergenic Intergenic -71493 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr6-6403 chr6 83553270 83553480 + 9.31 0.000 3' UTR (NM_001256717, exon 30 of 30) 3' UTR (NM_001256717, exon 30 of 30) 40841 NM_001170423 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr2-5288 chr2 66435079 66435289 + 9.31 0.000 promoter-TSS (NM_002398) promoter-TSS (NM_002398) 59 NM_002398 4211 Hs.526754 NM_002398 ENSG00000143995 MEIS1 - Meis homeobox 1 protein-coding chr5-5648 chr5 157456361 157456571 + 9.31 0.000 intron (NR_136204, intron 1 of 3) intron (NR_136204, intron 1 of 3) -3553 NM_001099287 348938 Hs.4285 NM_001099287 ENSG00000172548 NIPAL4 ARCI6|ICHTHYIN|ICHYN NIPA like domain containing 4 protein-coding chr10-7594 chr10 19788065 19788275 + 9.31 0.000 Intergenic Intergenic -28262 NM_032812 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr19-3435 chr19 18809544 18809754 + 9.31 0.000 Intergenic L1MB5|LINE|L1 -18344 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr8-2358 chr8 27901511 27901721 + 9.31 0.000 intron (NM_173833, intron 7 of 8) intron (NM_173833, intron 7 of 8) -15500 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr11-4640 chr11 30388734 30388944 + 9.31 0.000 3' UTR (NM_001145399, exon 7 of 7) 3' UTR (NM_001145399, exon 7 of 7) 65735 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chrX-1749 chrX 47754468 47754678 + 9.31 0.000 Intergenic Intergenic 47382 NR_033924 392459 Hs.562045 NR_033924 ENSG00000187893 CXXC1P1 CXorf25|NCRNA00236 CXXC finger protein 1 pseudogene 1 pseudo chr1-8441 chr1 98331872 98332082 + 9.31 0.000 Intergenic Intergenic 121266 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr8-4031 chr8 60393584 60393794 + 9.31 0.000 Intergenic Intergenic 20129 NR_103854 100505532 Hs.720321 NR_103854 LINC01301 - long intergenic non-protein coding RNA 1301 ncRNA chr15-4185 chr15 99320281 99320491 + 9.31 0.000 intron (NM_001321676, intron 6 of 10) intron (NM_001321676, intron 6 of 10) 62861 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr4-7266 chr4 48203226 48203436 + 9.31 0.000 intron (NM_003215, intron 2 of 17) AluSz6|SINE|Alu 66507 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr1-6029 chr1 64961872 64962082 + 9.31 0.000 intron (NM_001321853, intron 2 of 26) intron (NM_001321853, intron 2 of 26) 4572 NM_002227 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr6-7760 chr6 93863143 93863353 + 9.31 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 144945 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr1-16611 chr1 238409974 238410184 + 9.31 0.000 Intergenic Intergenic 75938 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr7-3665 chr7 45390250 45390460 + 9.31 0.000 Intergenic Intergenic -183785 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr20-1536 chr20 49374709 49374919 + 9.31 0.000 exon (NM_004975, exon 2 of 2) exon (NM_004975, exon 2 of 2) 94131 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr17-2816 chr17 15273387 15273597 + 9.31 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -8166 NR_104017 5376 Hs.372031 NM_000304 ENSG00000109099 PMP22 CIDP|CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110 peripheral myelin protein 22 protein-coding chr1-8888 chr1 5651006 5651216 + 9.31 0.000 Intergenic Intergenic 211630 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr11-6577 chr11 72249969 72250179 + 9.31 0.000 Intergenic Intergenic -5898 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr9-3745 chr9 121486260 121486470 + 9.31 0.000 intron (NR_003191, intron 1 of 6) intron (NR_003191, intron 1 of 6) 13662 NR_045211 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chrX-4379 chrX 50585233 50585443 + 9.31 0.000 Intergenic L2c|LINE|L2 -114513 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr9-8132 chr9 100857155 100857365 + 9.31 0.000 Intergenic LTR33|LTR|ERVL -171467 NM_207299 54886 Hs.382683 NM_017753 ENSG00000148123 PLPPR1 LPPR1|PRG-3 phospholipid phosphatase related 1 protein-coding chr1-6638 chr1 44382723 44382933 + 9.31 0.000 Intergenic Intergenic -22332 NM_001319956 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr5-6250 chr5 93162418 93162628 + 9.31 0.000 Intergenic Intergenic 408820 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr3-4795 chr3 123655865 123656075 + 9.31 0.000 intron (NM_001321309, intron 23 of 32) L2c|LINE|L2 -33674 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr13-4010 chr13 71231811 71232021 + 9.31 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 216775 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr6-4436 chr6 33956591 33956801 + 9.31 0.000 Intergenic Intergenic 43355 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chrX-1559 chrX 49282848 49283058 + 9.31 0.000 intron (NM_001184745, intron 3 of 3) L2a|LINE|L2 13160 NM_001184745 89801 Hs.433652 NM_033215 ENSG00000049769 PPP1R3F HB2E|LL0XNC01-7P3.1|R3F protein phosphatase 1 regulatory subunit 3F protein-coding chr16-3741 chr16 12030186 12030396 + 9.31 0.000 intron (NM_032167, intron 4 of 20) L2|LINE|L2 53557 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr12-6405 chr12 75182091 75182301 + 9.31 0.000 intron (NM_001260499, intron 2 of 3) intron (NM_001260499, intron 2 of 3) 27552 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding chr9-7673 chr9 69692583 69692793 + 9.31 0.000 Intergenic MSTA|LTR|ERVL-MaLR -20317 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr8-4125 chr8 73665484 73665694 + 9.31 0.000 intron (NM_001164383, intron 1 of 9) intron (NM_001164383, intron 1 of 9) 81251 NM_001164380 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr11-5114 chr11 124285670 124285880 + 9.31 0.000 Intergenic L1P4|LINE|L1 20948 NM_001005198 219865 Hs.722725 NM_001005198 ENSG00000255298 OR8G5 OR11-298|OR8G5P|OR8G6 olfactory receptor family 8 subfamily G member 5 protein-coding chr3-6678 chr3 130804930 130805140 + 9.31 0.000 Intergenic L1PA4|LINE|L1 -45560 NM_001199181 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr15-2920 chr15 45158101 45158311 + 9.31 0.000 intron (NM_175940, intron 28 of 33) L3b|LINE|CR1 23001 NM_001301171 90525 Hs.310399 NM_138356 ENSG00000138606 SHF - Src homology 2 domain containing F protein-coding chrX-1985 chrX 11953772 11953982 + 9.31 0.000 intron (NM_001368398, intron 3 of 18) MER92B|LTR|ERV1 -111664 NM_001368402 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr10-1811 chr10 124105106 124105316 + 9.31 0.000 Intergenic Intergenic -11613 NM_001270764 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr5-1722 chr5 142185224 142185434 + 9.31 0.000 Intergenic Intergenic 76550 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr22-3455 chr22 41736440 41736650 + 9.31 0.000 intron (NM_152513, intron 11 of 30) AluY|SINE|Alu 37042 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr13-1834 chr13 83792811 83793021 + 9.31 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 89477 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr19-5241 chr19 42923117 42923327 + 9.31 0.000 TTS (NM_001290042) TTS (NM_001290042) -5328 NM_001031850 5675 Hs.646353 NM_002782 ENSG00000170848 PSG6 PSBG-10|PSBG-12|PSBG-6|PSG10|PSGGB pregnancy specific beta-1-glycoprotein 6 protein-coding chr1-7053 chr1 180117780 180117990 + 9.31 0.000 Intergenic HAL1|LINE|L1 -36948 NM_001004128 5768 Hs.719176 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr2-10822 chr2 53839173 53839383 + 9.31 0.000 intron (NM_001164165, intron 1 of 9) intron (NM_001164165, intron 1 of 9) 9927 NR_037453 100500850 NR_037453 ENSG00000265452 MIR3682 mir-3682 microRNA 3682 ncRNA chr17-2590 chr17 77070927 77071137 + 9.31 0.000 Intergenic Intergenic -17611 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr8-2330 chr8 6423836 6424046 + 9.31 0.000 intron (NM_001172574, intron 3 of 7) L1MC|LINE|L1 16788 NM_001322045 79648 Hs.593807 NM_024596 ENSG00000147316 MCPH1 BRIT1|MCT microcephalin 1 protein-coding chr21-445 chr21 41616297 41616507 + 9.31 0.000 Intergenic Intergenic -62900 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr17-4347 chr17 4961643 4961853 + 9.31 0.000 intron (NM_004890, intron 1 of 6) AluY|SINE|Alu 6069 NM_004890 9552 Hs.90436 NM_004890 ENSG00000091640 SPAG7 ACRP|FSA-1 sperm associated antigen 7 protein-coding chr1-13997 chr1 25791582 25791792 + 9.31 0.000 Intergenic Intergenic -8506 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr3-9722 chr3 66969770 66969980 + 9.31 0.000 Intergenic MIR|SINE|MIR -28432 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr4-2715 chr4 3767137 3767347 + 9.31 0.000 exon (NM_000683, exon 1 of 1) exon (NM_000683, exon 1 of 1) 857 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr3-2242 chr3 46896074 46896284 + 9.31 0.000 intron (NM_001184744, intron 4 of 14) GA-rich|Low_complexity|Low_complexity 13930 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr1-7248 chr1 227841989 227842199 + 9.31 0.000 intron (NM_183062, intron 3 of 4) MSTB1|LTR|ERVL-MaLR 26377 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr1-6783 chr1 84253911 84254121 + 9.31 0.000 Intergenic Intergenic -44522 NM_001010971 148418 Hs.591445 NM_001010971 ENSG00000203943 SAMD13 HSD-41|HSD-42 sterile alpha motif domain containing 13 protein-coding chrX-3122 chrX 8758208 8758418 + 9.31 0.000 Intergenic Intergenic -26176 NM_000216 3730 Hs.521869 NM_000216 ENSG00000011201 ANOS1 ADMLX|HH1|HHA|KAL|KAL1|KALIG-1|KMS|WFDC19 anosmin 1 protein-coding chr21-747 chr21 42065516 42065726 + 9.31 0.000 intron (NM_001199527, intron 1 of 21) AluSc5|SINE|Alu 2744 NM_001199528 89766 Hs.242520 NM_173568 ENSG00000177398 UMODL1 - uromodulin like 1 protein-coding chr9-4801 chr9 135717104 135717314 + 9.31 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 15024 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr12-4973 chr12 76914982 76915192 + 9.31 0.000 Intergenic Intergenic -36068 NM_001321 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr5-6607 chr5 35731686 35731896 + 9.31 0.000 intron (NM_024867, intron 21 of 36) L3|LINE|CR1 113928 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr2-5416 chr2 112590886 112591096 + 9.31 0.000 Intergenic LTR79|LTR|ERVL 6137 NM_001304354 84269 Hs.375707 NM_032309 ENSG00000125611 CHCHD5 C2orf9|CHTM1|MIC14|MIX14 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding chr3-2678 chr3 48428859 48429069 + 9.31 0.000 intron (NM_001130082, intron 1 of 37) CpG 499 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chr1-12141 chr1 174373473 174373683 + 9.31 0.000 intron (NM_001366445, intron 12 of 13) intron (NM_001366445, intron 12 of 13) -74386 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr7-2829 chr7 100559864 100560074 + 9.31 0.000 intron (NM_006076, intron 6 of 11) intron (NM_006076, intron 6 of 11) 13931 NM_001348677 100316904 Hs.633863 NM_001168682 ENSG00000205307 SAP25 - Sin3A associated protein 25 protein-coding chr8-6540 chr8 68724393 68724603 + 9.31 0.000 intron (NM_001349479, intron 9 of 11) intron (NM_001349479, intron 9 of 11) 379692 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr10-8719 chr10 102839659 102839869 + 9.31 0.000 Intergenic HERVK11-int|LTR|ERVK -2351 NM_000102 1586 Hs.438016 NM_000102 ENSG00000148795 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450 family 17 subfamily A member 1 protein-coding chr9-3270 chr9 33046361 33046571 + 9.31 0.000 3' UTR (NM_018225, exon 12 of 12) 3' UTR (NM_018225, exon 12 of 12) 21193 NM_001539 3301 Hs.445203 NM_001539 ENSG00000086061 DNAJA1 DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2 DnaJ heat shock protein family (Hsp40) member A1 protein-coding chr3-8496 chr3 128975916 128976126 + 9.31 0.000 intron (NM_001348522, intron 7 of 8) intron (NM_001348522, intron 7 of 8) 15876 NM_001348523 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr6-4002 chr6 117300576 117300786 + 9.31 0.000 intron (NM_002944, intron 42 of 42) intron (NM_002944, intron 42 of 42) 35123 NM_182645 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr14-1525 chr14 56308269 56308479 + 9.31 0.000 Intergenic AluJr|SINE|Alu 189963 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chrX-3277 chrX 99558186 99558396 + 9.31 0.000 Intergenic Intergenic 851982 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr4-3650 chr4 23485197 23485407 + 9.31 0.000 Intergenic Intergenic 395990 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr4-2644 chr4 173121405 173121615 + 9.31 0.000 Intergenic Intergenic -47301 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr1-9700 chr1 51955982 51956192 + 9.31 0.000 intron (NM_002867, intron 2 of 4) MIR3|SINE|MIR 34613 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr19-4069 chr19 10861318 10861528 + 9.31 0.000 intron (NM_001136482, intron 5 of 6) L2b|LINE|L2 -10130 NM_001370088 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr4-3256 chr4 89309629 89309839 + 9.31 0.000 Intergenic MER117|DNA|hAT-Charlie -1934 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr8-7316 chr8 133381866 133382076 + 9.31 0.000 Intergenic L1ME4a|LINE|L1 -84667 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr7-9715 chr7 156034474 156034684 + 9.31 0.000 Intergenic MSTA|LTR|ERVL-MaLR 71947 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr13-2157 chr13 110347469 110347679 + 9.31 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) 6616 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr4-8432 chr4 153771154 153771364 + 9.31 0.000 Intergenic L1MB7|LINE|L1 -11235 NM_173662 285533 Hs.388364 NM_173662 ENSG00000145428 RNF175 - ring finger protein 175 protein-coding chr22-3676 chr22 23312990 23313200 + 9.31 0.000 intron (NM_004327, intron 20 of 22) intron (NM_004327, intron 20 of 22) -13521 NR_149133 102724679 Hs.517462 NR_149133 ENSG00000236611 LINC02556 - long intergenic non-protein coding RNA 2556 ncRNA chr19-7067 chr19 55197659 55197869 + 9.31 0.000 intron (NM_002842, intron 8 of 19) intron (NM_002842, intron 8 of 19) 11737 NM_001161440 5794 Hs.179770 NM_002842 ENSG00000080031 PTPRH R-PTP-H|SAP1 protein tyrosine phosphatase receptor type H protein-coding chr6-5293 chr6 141156573 141156783 + 9.31 0.000 Intergenic AluJb|SINE|Alu 472864 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr11-7838 chr11 114166316 114166526 + 9.31 0.000 intron (NM_001354752, intron 2 of 4) intron (NM_001354752, intron 2 of 4) 103210 NM_001354752 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr11-7153 chr11 127302219 127302429 + 9.31 0.000 intron (NR_120580, intron 1 of 2) L3|LINE|CR1 31254 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr11-5228 chr11 18587788 18587998 + 9.31 0.000 intron (NM_001040697, intron 1 of 11) intron (NM_001040697, intron 1 of 11) 841 NM_001261384 55293 Hs.407991 NM_018314 ENSG00000151116 UEVLD ATTP|UEV3 UEV and lactate/malate dehyrogenase domains protein-coding chr5-2901 chr5 122071433 122071643 + 9.31 0.000 intron (NM_001178102, intron 3 of 5) L2c|LINE|L2 5636 NM_001317073 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr11-3385 chr11 130022884 130023094 + 9.31 0.000 Intergenic AluJo|SINE|Alu -20154 NM_001367890 56980 Hs.275086 NM_020228 ENSG00000170325 PRDM10 PFM7|TRIS PR/SET domain 10 protein-coding chr7-8982 chr7 100269107 100269317 + 9.31 0.000 intron (NR_028038, intron 1 of 6) AluSp|SINE|Alu 2993 NR_028038 352954 Hs.556063 NM_178831 ENSG00000239521 CASTOR3 GATS|STAG3OS CASTOR family member 3 protein-coding chr7-9139 chr7 110704445 110704655 + 9.31 0.000 intron (NM_001350963, intron 5 of 5) intron (NM_001350963, intron 5 of 5) -386456 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr20-4211 chr20 47202781 47202991 + 9.31 0.000 Intergenic LTR33C|LTR|ERVL 35919 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA chr8-4056 chr8 63012747 63012957 + 9.31 0.000 Intergenic Intergenic 25954 NM_003878 8836 Hs.78619 NM_003878 ENSG00000137563 GGH GH gamma-glutamyl hydrolase protein-coding chr11-6489 chr11 68231210 68231420 + 9.31 0.000 Intergenic AluJb|SINE|Alu -17667 NR_161380 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr11-8876 chr11 14194122 14194332 + 9.31 0.000 intron (NM_006108, intron 6 of 15) intron (NM_006108, intron 6 of 15) 164258 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr4-3198 chr4 17072530 17072740 + 9.31 0.000 Intergenic LTR16A2|LTR|ERVL 113422 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr4-7506 chr4 74366701 74366911 + 9.31 0.000 intron (NM_001432, intron 1 of 4) intron (NM_001432, intron 1 of 4) 1661 NM_001432 2069 Hs.115263 NM_001432 ENSG00000124882 EREG EPR|ER|Ep epiregulin protein-coding chr1-4308 chr1 32367818 32368028 + 9.31 0.000 3' UTR (NM_001300958, exon 10 of 10) 3' UTR (NM_001300958, exon 10 of 10) 5384 NM_052841 81629 Hs.512763 NM_052841 ENSG00000162526 TSSK3 SPOGA3|STK22C|STK22D|TSK3 testis specific serine kinase 3 protein-coding chr3-5778 chr3 24542994 24543204 + 9.31 0.000 Intergenic MER5B|DNA|hAT-Charlie -47391 NM_001354708 7068 Hs.187861 NM_000461 ENSG00000151090 THRB C-ERBA-2|C-ERBA-BETA|ERBA2|GRTH|NR1A2|PRTH|THR1|THRB1|THRB2 thyroid hormone receptor beta protein-coding chr10-8086 chr10 68084507 68084717 + 9.31 0.000 Intergenic Intergenic -9329 NM_001278186 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr18-1387 chr18 55097551 55097761 + 9.31 0.000 Intergenic Intergenic 26650 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr9-6867 chr9 81183861 81184071 + 9.31 0.000 Intergenic Intergenic 505569 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr3-3917 chr3 48419276 48419486 + 9.31 0.000 intron (NM_002673, intron 11 of 37) intron (NM_002673, intron 11 of 37) 10082 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chr12-5876 chr12 52155399 52155609 + 9.31 0.000 Intergenic Intergenic 36510 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr7-3843 chr7 100867765 100867975 + 9.31 0.000 promoter-TSS (NR_106935) promoter-TSS (NR_106935) -166 NR_106935 102466755 NR_106935 ENSG00000283821 MIR6875 hsa-mir-6875 microRNA 6875 ncRNA chr12-3583 chr12 46431948 46432158 + 9.31 0.000 intron (NR_125381, intron 2 of 2) intron (NR_125381, intron 2 of 2) 47946 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr6-4368 chr6 20740525 20740735 + 9.31 0.000 intron (NM_017774, intron 6 of 15) intron (NM_017774, intron 6 of 15) 206173 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr7-8336 chr7 42628295 42628505 + 9.31 0.000 Intergenic Intergenic 78047 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr3-8144 chr3 29281443 29281653 + 9.31 0.000 promoter-TSS (NR_109804) promoter-TSS (NR_109804) 236 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr8-6756 chr8 90942869 90943079 + 9.31 0.000 intron (NM_022351, intron 10 of 12) intron (NM_022351, intron 10 of 12) 42103 NM_001363275 100127983 Hs.733266 NM_001190972 ENSG00000253250 C8orf88 - chromosome 8 open reading frame 88 protein-coding chr21-464 chr21 39682127 39682337 + 9.31 0.000 Intergenic L1MC5|LINE|L1 24899 NM_033170 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr2-8814 chr2 169272997 169273207 + 9.31 0.000 intron (NM_004525, intron 14 of 78) intron (NM_004525, intron 14 of 78) 89432 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chrX-1331 chrX 133763458 133763668 + 9.31 0.000 intron (NM_001164619, intron 1 of 6) intron (NM_001164619, intron 1 of 6) -133880 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr14-2535 chr14 21668457 21668667 + 9.31 0.000 Intergenic Intergenic 2455 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr5-2570 chr5 39501477 39501687 + 9.31 0.000 Intergenic Intergenic -18849 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr16-1854 chr16 74813100 74813310 + 9.31 0.000 Intergenic G-rich|Low_complexity|Low_complexity -38385 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr11-5164 chr11 3657708 3657918 + 9.31 0.000 intron (NM_004314, intron 1 of 4) L1ME3G|LINE|L1 12685 NM_004314 417 Hs.382188 NM_004314 ENSG00000129744 ART1 ART2|ARTC1|CD296|RT6 ADP-ribosyltransferase 1 protein-coding chrX-1706 chrX 17655212 17655422 + 9.31 0.000 intron (NM_001291868, intron 1 of 7) CpG 19817 NM_001136024 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr14-1734 chr14 58679190 58679400 + 9.31 0.000 Intergenic Intergenic 40458 NR_046095 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr18-1471 chr18 58721760 58721970 + 9.31 0.000 intron (NM_006785, intron 9 of 16) intron (NM_006785, intron 9 of 16) -49992 NM_001289967 101927322 Hs.644875 NM_001289967 LOC101927322 - uncharacterized LOC101927322 protein-coding chr2-6264 chr2 45961106 45961316 + 9.31 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 309536 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr12-5477 chr12 124732765 124732975 + 9.31 0.000 Intergenic Intergenic 106801 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr1-7544 chr1 183279823 183280033 + 9.31 0.000 intron (NM_170706, intron 7 of 10) L2b|LINE|L2 24946 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr10-3206 chr10 100572828 100573038 + 9.31 0.000 Intergenic Intergenic 36990 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr4-6454 chr4 140983136 140983346 + 9.31 0.000 intron (NM_020724, intron 1 of 6) Tigger4|DNA|TcMar-Tigger 150228 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr1-6666 chr1 48688489 48688699 + 9.31 0.000 intron (NM_001323575, intron 6 of 12) intron (NM_001323575, intron 6 of 12) 88297 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr1-15802 chr1 177172281 177172491 + 9.31 0.000 intron (NM_021165, intron 1 of 7) intron (NM_021165, intron 1 of 7) 1428 NM_021165 57795 Hs.495918 NM_021165 ENSG00000198797 BRINP2 DBCCR1L2|FAM5B BMP/retinoic acid inducible neural specific 2 protein-coding chr2-5728 chr2 216911187 216911397 + 9.31 0.000 Intergenic Intergenic 40520 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr9-4557 chr9 87491012 87491222 + 9.31 0.000 Intergenic Intergenic -6111 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr3-5386 chr3 154060590 154060800 + 9.31 0.000 intron (NR_037901, intron 2 of 3) intron (NR_037901, intron 2 of 3) -60308 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr5-4244 chr5 135573505 135573715 + 9.31 0.000 intron (NM_004887, intron 3 of 3) intron (NM_004887, intron 3 of 3) -5555 NM_001349335 153328 Hs.412418 NM_145282 ENSG00000145832 SLC25A48 - solute carrier family 25 member 48 protein-coding chr6-6043 chr6 125932701 125932911 + 9.31 0.000 TTS (NM_001199619) TTS (NM_001199619) 13551 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr19-6890 chr19 45255921 45256131 + 9.31 0.000 intron (NM_001199867, intron 1 of 16) intron (NM_001199867, intron 1 of 16) 4755 NM_001199867 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr7-3478 chr7 2166908 2167118 + 9.31 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) 65932 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr3-6338 chr3 81199750 81199960 + 9.31 0.000 Intergenic Intergenic 205987 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr8-2269 chr8 94242212 94242422 + 9.31 0.000 Intergenic Intergenic 20002 NM_005261 2669 Hs.654463 NM_005261 ENSG00000164949 GEM KIR GTP binding protein overexpressed in skeletal muscle protein-coding chr1-5617 chr1 16966826 16967036 + 9.31 0.000 intron (NM_014675, intron 30 of 36) AluJb|SINE|Alu 13689 NM_002403 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr1-6439 chr1 16387224 16387434 + 9.31 0.000 intron (NR_073501, intron 2 of 4) intron (NR_073501, intron 2 of 4) 20087 NR_073501 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr19-4233 chr19 49553930 49554140 + 9.31 0.000 Intergenic Intergenic 26032 NM_020650 57333 Hs.567550 NM_020650 ENSG00000142552 RCN3 RLP49 reticulocalbin 3 protein-coding chr20-2094 chr20 23394415 23394625 + 9.31 0.000 intron (NM_001283026, intron 4 of 9) L2a|LINE|L2 26968 NR_104266 63908 Hs.269471 NM_022080 ENSG00000125814 NAPB SNAP-BETA|SNAPB NSF attachment protein beta protein-coding chr20-1354 chr20 32589364 32589574 + 9.31 0.000 intron (NR_034152, intron 1 of 2) intron (NR_034152, intron 1 of 2) 1990 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr8-3450 chr8 92049440 92049650 + 9.31 0.000 intron (NM_001198633, intron 1 of 10) intron (NM_001198633, intron 1 of 10) 13089 NM_004349 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr11-4580 chr11 128693705 128693915 + 9.31 0.000 promoter-TSS (NM_001271010) promoter-TSS (NM_001271010) -106 NM_001167681 2313 Hs.504281 NM_002017 ENSG00000151702 FLI1 BDPLT21|EWSR2|SIC-1 Fli-1 proto-oncogene, ETS transcription factor protein-coding chr2-3774 chr2 10036114 10036324 + 9.31 0.000 Intergenic Intergenic 7182 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr2-11640 chr2 5529257 5529467 + 9.31 0.000 Intergenic Intergenic 161756 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr13-2948 chr13 43770037 43770247 + 9.31 0.000 intron (NM_001347966, intron 1 of 17) intron (NM_001347966, intron 1 of 17) 16830 NM_001347964 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr9-4166 chr9 15069131 15069341 + 9.31 0.000 Intergenic Intergenic 75909 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr20-2840 chr20 61022850 61023060 + 9.31 0.000 Intergenic Intergenic -56109 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LINC01718 - long intergenic non-protein coding RNA 1718 ncRNA chr20-2079 chr20 18276792 18277002 + 9.31 0.000 Intergenic Intergenic -11331 NM_001282995 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chrX-1569 chrX 56812751 56812961 + 9.31 0.000 intron (NM_001348129, intron 2 of 2) intron (NM_001348129, intron 2 of 2) -75272 NR_002308 442454 Hs.663220 NR_002308 UQCRBP1 - ubiquinol-cytochrome c reductase binding protein pseudogene 1 pseudo chr19-4288 chr19 733547 733757 + 9.31 0.000 intron (NM_002579, intron 5 of 8) intron (NM_002579, intron 5 of 8) -17460 NM_173481 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr11-5308 chr11 46476067 46476277 + 9.31 0.000 intron (NM_001267782, intron 13 of 19) intron (NM_001267782, intron 13 of 19) -24283 NR_036117 100422827 NR_036117 ENSG00000265014 MIR3160-1 mir-3160-1 microRNA 3160-1 ncRNA chr20-2085 chr20 19833511 19833721 + 9.31 0.000 Intergenic Intergenic -52905 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr11-5839 chr11 8778484 8778694 + 9.31 0.000 intron (NR_120590, intron 1 of 4) intron (NR_120590, intron 1 of 4) 9811 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr7-6479 chr7 5327895 5328105 + 9.31 0.000 intron (NM_001080495, intron 19 of 29) AluSz|SINE|Alu 45057 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chrX-530 chrX 71283372 71283582 + 9.31 0.000 promoter-TSS (NM_001145409) promoter-TSS (NM_001145409) -158 NM_007363 4841 Hs.533282 NM_007363 ENSG00000147140 NONO MRXS34|NMT55|NRB54|P54|P54NRB|PPP1R114 non-POU domain containing octamer binding protein-coding chr6-3601 chr6 92419846 92420056 + 9.31 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -729523 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr10-5698 chr10 100461749 100461959 + 9.31 0.000 Intergenic L1MA2|LINE|L1 -1155 NM_003393 7479 Hs.421281 NM_003393 ENSG00000075290 WNT8B - Wnt family member 8B protein-coding chr4-5169 chr4 157072138 157072348 + 9.31 0.000 Intergenic Intergenic -3882 NM_001166061 2743 Hs.32973 NM_000824 ENSG00000109738 GLRB HKPX2 glycine receptor beta protein-coding chr2-3742 chr2 126829 127039 + 9.31 0.000 Intergenic SVA_E|Retroposon|SVA -80429 NM_001077710 642273 Hs.8379 NM_001077710 ENSG00000184731 FAM110C - family with sequence similarity 110 member C protein-coding chr13-3300 chr13 50646025 50646235 + 9.31 0.000 Intergenic Intergenic -118681 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr4-4657 chr4 82892252 82892462 + 9.31 0.000 intron (NM_001318120, intron 3 of 28) Tigger6b|DNA|TcMar-Tigger -1077 NM_001300745 22872 Hs.370024 NM_014933 ENSG00000138674 SEC31A ABP125|ABP130|HSPC275|HSPC334|SEC31L1 SEC31 homolog A, COPII coat complex component protein-coding chr5-1568 chr5 132470135 132470345 + 9.31 0.000 intron (NR_161242, intron 3 of 3) intron (NR_161242, intron 3 of 3) 20533 NR_149068 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr10-2631 chr10 87675856 87676066 + 9.31 0.000 intron (NM_001015880, intron 1 of 12) intron (NM_001015880, intron 1 of 12) 16083 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr1-15020 chr1 92951375 92951585 + 9.31 0.000 intron (NM_001006605, intron 1 of 4) MLT1E2|LTR|ERVL-MaLR 9982 NM_001006605 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr6-6056 chr6 132701831 132702041 + 9.31 0.000 intron (NM_004666, intron 2 of 6) L1MA2|LINE|L1 12119 NM_004666 8876 Hs.12114 NM_004666 ENSG00000112299 VNN1 HDLCQ8|Tiff66 vanin 1 protein-coding chr6-5471 chr6 160358320 160358530 + 9.31 0.000 intron (NM_021977, intron 1 of 10) intron (NM_021977, intron 1 of 10) 10047 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr7-7451 chr7 85135917 85136127 + 9.31 0.000 Intergenic Intergenic -14091 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr4-8053 chr4 121273132 121273342 + 9.31 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -45754 NM_001244764 79931 Hs.208206 NM_024873 ENSG00000050730 TNIP3 ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding chr2-5361 chr2 96413451 96413661 + 9.31 0.000 Intergenic Intergenic 77790 NM_015341 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr1-7751 chr1 34403052 34403262 + 9.31 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 226250 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr6-4426 chr6 33585624 33585834 + 9.31 0.000 TTS (NR_027908) TTS (NR_027908) 2030 NR_028361 449520 Hs.582973 NM_001005478 ENSG00000204188 GGNBP1 - gametogenetin binding protein 1 (pseudogene) pseudo chr5-4475 chr5 8231501 8231711 + 9.31 0.000 Intergenic Intergenic 225958 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr14-3717 chr14 21724160 21724370 + 9.31 0.000 Intergenic Intergenic -53248 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr8-4562 chr8 126936616 126936826 + 9.31 0.000 Intergenic Intergenic -76433 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr9-5597 chr9 114524294 114524504 + 9.31 0.000 Intergenic Intergenic -18926 NM_001173425 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr2-9885 chr2 215540557 215540767 + 9.31 0.000 Intergenic Intergenic 86955 NR_110607 102724849 Hs.116161 NR_110607 ENSG00000225166 LOC102724849 - uncharacterized LOC102724849 ncRNA chr6-6997 chr6 20751482 20751692 + 9.31 0.000 intron (NM_017774, intron 6 of 15) intron (NM_017774, intron 6 of 15) 217130 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr5-8765 chr5 147770770 147770980 + 9.31 0.000 intron (NM_001270934, intron 1 of 20) intron (NM_001270934, intron 1 of 20) 11853 NM_001282282 9832 Hs.740461 NM_014790 ENSG00000176049 JAKMIP2 JAMIP2|NECC1 janus kinase and microtubule interacting protein 2 protein-coding chr2-8980 chr2 190765802 190766012 + 9.31 0.000 Intergenic Intergenic 106749 NM_001321314 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr6-8327 chr6 146255826 146256036 + 9.31 0.000 intron (NM_001278065, intron 3 of 9) intron (NM_001278065, intron 3 of 9) 226733 NM_001278067 2911 Hs.32945 NM_000838 ENSG00000152822 GRM1 GPRC1A|MGLU1|MGLUR1|PPP1R85|SCA44|SCAR13 glutamate metabotropic receptor 1 protein-coding chr3-3534 chr3 42659472 42659682 + 9.31 0.000 exon (NM_145166, exon 2 of 6) exon (NM_145166, exon 2 of 6) -5189 NR_125400 101928323 NR_125400 LOC101928323 - uncharacterized LOC101928323 ncRNA chr12-2076 chr12 557917 558127 + 9.31 0.000 exon (NM_173593, exon 17 of 20) exon (NM_173593, exon 17 of 20) 28464 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr10-4048 chr10 28570310 28570520 + 9.31 0.000 intron (NM_100486, intron 3 of 12) intron (NM_100486, intron 3 of 12) 37297 NM_100486 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr4-3182 chr4 4985884 4986094 + 9.31 0.000 intron (NR_125893, intron 2 of 2) intron (NR_125893, intron 2 of 2) 33469 NM_018659 54360 Hs.13872 NM_018659 ENSG00000170891 CYTL1 C17|C4orf4 cytokine like 1 protein-coding chr4-6393 chr4 115295520 115295730 + 9.31 0.000 Intergenic Intergenic -182005 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr3-8390 chr3 98137127 98137337 + 9.31 0.000 Intergenic MER34B-int|LTR|ERV1 4534 NM_001005338 26341 Hs.537383 NM_001005338 ENSG00000231192 OR5H1 HSHTPCRX14|HTPCRX14 olfactory receptor family 5 subfamily H member 1 protein-coding chr13-986 chr13 44734054 44734264 + 9.31 0.000 Intergenic Intergenic 75471 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr2-8125 chr2 80105036 80105246 + 9.31 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) 199611 NM_178839 347730 Hs.591580 NM_178839 ENSG00000162951 LRRTM1 - leucine rich repeat transmembrane neuronal 1 protein-coding chr20-494 chr20 3115693 3115903 + 9.31 0.000 intron (NM_001267584, intron 3 of 4) AluSx3|SINE|Alu 8887 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chr10-2038 chr10 79324045 79324255 + 9.31 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -23319 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr9-4856 chr9 2030907 2031117 + 9.31 0.000 intron (NM_001289397, intron 2 of 32) L1MC4a|LINE|L1 9067 NM_001289396 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr15-1906 chr15 78067674 78067884 + 9.31 0.000 intron (NM_144572, intron 1 of 12) intron (NM_144572, intron 1 of 12) 9873 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr20-1901 chr20 58690730 58690940 + 9.31 0.000 intron (NM_001204872, intron 1 of 12) intron (NM_001204872, intron 1 of 12) 1704 NM_001204872 79716 Hs.654868 NM_024663 ENSG00000215440 NPEPL1 bA261P9.2 aminopeptidase like 1 protein-coding chr7-3259 chr7 5342688 5342898 + 9.31 0.000 intron (NM_001080495, intron 18 of 29) Tigger1|DNA|TcMar-Tigger 59850 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr1-11231 chr1 246503473 246503683 + 9.31 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 3701 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr12-7616 chr12 79480824 79481034 + 9.31 0.000 Intergenic SATR2|Satellite|Satellite 61672 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr1-8281 chr1 39613261 39613471 + 9.31 0.000 Intergenic AluJr4|SINE|Alu 26277 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr7-7268 chr7 31897105 31897315 + 9.31 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 173197 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr1-14803 chr1 71857913 71858123 + 9.31 0.000 intron (NM_173808, intron 2 of 6) intron (NM_173808, intron 2 of 6) -21006 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr1-13701 chr1 14346176 14346386 + 9.31 0.000 Intergenic Intergenic 73692 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr14-1886 chr14 94761990 94762200 + 9.31 0.000 Intergenic Intergenic 8067 NM_173849 145258 Hs.440438 NM_173849 ENSG00000133937 GSC SAMS goosecoid homeobox protein-coding chr14-5309 chr14 101587025 101587235 + 9.31 0.000 Intergenic Intergenic 25779 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chrX-2072 chrX 20150053 20150263 + 9.31 0.000 3' UTR (NM_004586, exon 22 of 22) 3' UTR (NM_004586, exon 22 of 22) -8320 NM_001412 1964 Hs.522590 NM_001412 ENSG00000173674 EIF1AX EIF1A|EIF1AP1|EIF4C|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A X-linked protein-coding chr12-2937 chr12 84503143 84503353 + 9.31 0.000 Intergenic MER50-int|LTR|ERV1 409551 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr5-3525 chr5 8559976 8560186 + 9.31 0.000 Intergenic L2c|LINE|L2 99156 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr17-4900 chr17 73189677 73189887 + 9.31 0.000 Intergenic Intergenic -3273 NM_018714 9382 Hs.103555 NM_018714 ENSG00000166685 COG1 CDG2G|LDLB component of oligomeric golgi complex 1 protein-coding chr7-3894 chr7 112001164 112001374 + 9.31 0.000 intron (NM_001363540, intron 2 of 52) Tigger7|DNA|TcMar-Tigger 192764 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr3-1304 chr3 177184704 177184914 + 9.31 0.000 intron (NM_001321194, intron 1 of 16) AluSx|SINE|Alu 11669 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr16-3594 chr16 74222112 74222322 + 9.31 0.000 Intergenic L1MC4|LINE|L1 -6696 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr4-5536 chr4 115396402 115396612 + 9.31 0.000 Intergenic L1PREC2|LINE|L1 -282887 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr21-901 chr21 18644877 18645087 + 9.31 0.000 intron (NR_109925, intron 2 of 3) MLT1D|LTR|ERVL-MaLR 41182 NR_036166 100422920 NR_036166 ENSG00000265841 MIR548X - microRNA 548x ncRNA chr1-5276 chr1 207645096 207645306 + 9.31 0.000 promoter-TSS (NM_175710) promoter-TSS (NM_175710) 68 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr16-2151 chr16 49643578 49643788 + 9.31 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) 20641 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr1-10952 chr1 212649181 212649391 + 9.31 0.000 Intergenic Intergenic 24812 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding chr5-8145 chr5 100677369 100677579 + 9.31 0.000 Intergenic Intergenic 139091 NR_031686 100302288 NR_031686 ENSG00000221263 MIR548P MIRN548P|hsa-mir-548p microRNA 548p ncRNA chr14-2913 chr14 39230580 39230790 + 9.31 0.000 Intergenic Intergenic -3230 NM_001329214 4253 Hs.287694 NM_005930 ENSG00000150527 MIA2 CTAGE5|MEA6|MGEA|MGEA11|MGEA6|TALI MIA SH3 domain ER export factor 2 protein-coding chr10-3533 chr10 74029449 74029659 + 9.31 0.000 intron (NM_014000, intron 1 of 21) intron (NM_014000, intron 1 of 21) 31438 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr7-7937 chr7 9912705 9912915 + 9.31 0.000 Intergenic L1MA3|LINE|L1 278540 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr7-3270 chr7 15723926 15724136 + 9.31 0.000 Intergenic Intergenic 35653 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chrX-4451 chrX 56228072 56228282 + 9.31 0.000 intron (NM_001324104, intron 2 of 6) intron (NM_001324104, intron 2 of 6) -4179 NR_136705 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr2-11429 chr2 221867433 221867643 + 9.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -293336 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr12-3655 chr12 111161268 111161478 + 9.31 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 61369 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr1-7887 chr1 118883482 118883692 + 9.31 0.000 3' UTR (NM_001330677, exon 8 of 8) 3' UTR (NM_001330677, exon 8 of 8) 104756 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr19-5315 chr19 2351110 2351320 + 9.31 0.000 intron (NM_001077238, intron 13 of 14) intron (NM_001077238, intron 13 of 14) 22531 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr11-2391 chr11 1772091 1772301 + 9.31 0.000 Intergenic L1MC2|LINE|L1 -8269 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr3-3897 chr3 45298765 45298975 + 9.31 0.000 Intergenic Intergenic -72583 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr1-14515 chr1 50853065 50853275 + 9.31 0.000 intron (NM_007051, intron 2 of 18) intron (NM_007051, intron 2 of 18) 107097 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr3-8972 chr3 15685899 15686109 + 9.31 0.000 non-coding (NR_146112, exon 20 of 29) non-coding (NR_146112, exon 20 of 29) 11367 NR_036085 100422990 NR_036085 ENSG00000264354 MIR3134 - microRNA 3134 ncRNA chr22-3718 chr22 25235321 25235531 + 9.31 0.000 Intergenic AluJr|SINE|Alu 15787 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding chr4-8122 chr4 126766531 126766741 + 9.31 0.000 Intergenic Intergenic -866321 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr17-3908 chr17 53207902 53208112 + 9.31 0.000 Intergenic L1PB1|LINE|L1 222502 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding chr22-1317 chr22 47781632 47781842 + 9.31 0.000 intron (NR_122046, intron 8 of 8) MIR|SINE|MIR 150063 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA chr12-6851 chr12 15780623 15780833 + 9.31 0.000 intron (NM_004447, intron 1 of 20) L2c|LINE|L2 8660 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr17-5703 chr17 55225890 55226100 + 9.31 0.000 Intergenic Intergenic -38965 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr11-9848 chr11 72692160 72692370 + 9.31 0.000 intron (NR_161388, intron 25 of 29) L3|LINE|CR1 -8209 NR_146780 100506020 Hs.503165 NR_146780 ENSG00000245148 ARAP1-AS2 - ARAP1 antisense RNA 2 ncRNA chr19-3272 chr19 2953178 2953388 + 9.31 0.000 Intergenic LTR43B|LTR|ERV1 -8312 NM_021217 58492 Hs.38004 NM_021217 ENSG00000175691 ZNF77 pT1 zinc finger protein 77 protein-coding chr5-4050 chr5 42777712 42777922 + 9.31 0.000 intron (NM_001134848, intron 4 of 8) intron (NM_001134848, intron 4 of 8) 20999 NM_001134848 100129792 Hs.745017 NM_001134848 ENSG00000198865 CCDC152 CH5400 coiled-coil domain containing 152 protein-coding chr2-7547 chr2 23545736 23545946 + 9.31 0.000 intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 160662 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr20-4395 chr20 58244171 58244381 + 9.31 0.000 intron (NR_003505, intron 9 of 16) intron (NR_003505, intron 9 of 16) -15623 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr18-1340 chr18 79377556 79377766 + 9.31 0.000 non-coding (NR_148360, exon 32 of 32) non-coding (NR_148360, exon 32 of 32) -18269 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr2-5350 chr2 95192928 95193138 + 9.31 0.000 Intergenic LTR13|LTR|ERVK 27224 NM_001017396 7549 Hs.590916 NM_021088 ENSG00000275111 ZNF2 A1-5|ZNF661|Zfp661 zinc finger protein 2 protein-coding chr9-3134 chr9 95040982 95041192 + 9.31 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -24263 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr13-1940 chr13 94724904 94725114 + 9.31 0.000 Intergenic Intergenic -11566 NR_158368 112268114 Hs.741900 NR_158368 LOC112268114 - uncharacterized LOC112268114 ncRNA chr19-2354 chr19 50550380 50550590 + 9.31 0.000 intron (NM_001080457, intron 1 of 2) intron (NM_001080457, intron 1 of 2) 557 NM_001348568 94030 Hs.120873 NM_001080457 ENSG00000131409 LRRC4B HSM|LRIG4|NGL-3 leucine rich repeat containing 4B protein-coding chr2-6186 chr2 6828190 6828400 + 9.31 0.000 TTS (NR_126359) TTS (NR_126359) 12169 NR_126359 104326052 Hs.7155 NR_126359 NRIR lncRNA-CMPK2 negative regulator of interferon response ncRNA chr4-3955 chr4 177586604 177586814 + 9.31 0.000 Intergenic L2c|LINE|L2 -142048 NR_028342 285501 Hs.722466 NM_001085490 ENSG00000231171 LINC01098 - long intergenic non-protein coding RNA 1098 ncRNA chr11-5497 chr11 80353258 80353468 + 9.31 0.000 Intergenic MER3|DNA|hAT-Charlie 409440 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr11-8089 chr11 37364959 37365169 + 9.31 0.000 Intergenic L1PB3|LINE|L1 -573537 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr10-4508 chr10 88926875 88927085 + 9.31 0.000 Intergenic Intergenic -5704 NR_125373 100132116 NR_125373 ENSG00000180139 ACTA2-AS1 UC001kfo|ZXF1|uc001kfo.1 ACTA2 antisense RNA 1 ncRNA chr2-12089 chr2 33241554 33241764 + 9.31 0.000 intron (NM_206943, intron 9 of 33) intron (NM_206943, intron 9 of 33) 107062 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr14-1243 chr14 104163507 104163717 + 9.31 0.000 intron (NM_015656, intron 4 of 14) intron (NM_015656, intron 4 of 14) 24889 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding chr2-6379 chr2 111708128 111708338 + 9.31 0.000 Intergenic Intergenic 62901 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr9-2040 chr9 3240793 3241003 + 9.31 0.000 intron (NM_134428, intron 16 of 17) intron (NM_134428, intron 16 of 17) 59309 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr19-4298 chr19 904178 904388 + 9.31 0.000 intron (NM_138774, intron 1 of 7) intron (NM_138774, intron 1 of 7) 8936 NM_138774 91300 Hs.557655 NM_138774 ENSG00000198858 R3HDM4 C19orf22 R3H domain containing 4 protein-coding chrX-3865 chrX 3001687 3001897 + 9.31 0.000 Intergenic L1MEd|LINE|L1 -4821 NM_001011719 347527 Hs.351533 NM_001011719 ENSG00000205667 ARSH sulfatase arylsulfatase family member H protein-coding chr3-10500 chr3 136381123 136381333 + 9.31 0.000 intron (NM_005862, intron 22 of 33) L2c|LINE|L2 130888 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr20-3864 chr20 26161729 26161939 + 9.31 0.000 Intergenic Intergenic 46444 NR_030386 724033 NR_030386 ENSG00000284419 MIR663A MIR663|MIRN663|hsa-mir-663|hsa-mir-663a|mir-663a microRNA 663a ncRNA chr10-2996 chr10 93839468 93839678 + 9.31 0.000 Intergenic Intergenic -54405 NR_144337 159371 Hs.632085 NM_153226 ENSG00000176273 SLC35G1 C10orf60|POST|TMEM20 solute carrier family 35 member G1 protein-coding chr8-1882 chr8 22580410 22580620 + 9.31 0.000 promoter-TSS (NM_001368120) promoter-TSS (NM_001368120) 40 NM_176871 64236 Hs.632034 NM_021630 ENSG00000120913 PDLIM2 MYSTIQUE|SLIM PDZ and LIM domain 2 protein-coding chr11-10678 chr11 128475310 128475520 + 9.31 0.000 intron (NM_001330451, intron 5 of 6) intron (NM_001330451, intron 5 of 6) 46895 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr14-1375 chr14 29442724 29442934 + 9.31 0.000 Intergenic Intergenic 484267 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr17-3465 chr17 42067271 42067481 + 9.31 0.000 Intergenic Intergenic -16775 NM_001358661 110806298 Hs.127116 NM_001358661 ENSG00000267221 C17orf113 - chromosome 17 open reading frame 113 protein-coding chrX-3463 chrX 28816658 28816868 + 9.31 0.000 intron (NM_014271, intron 2 of 10) L1PA16|LINE|L1 229317 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr22-1609 chr22 22857771 22857981 + 9.31 0.000 Intergenic Intergenic -28391 NR_049835 100847006 NR_049835 ENSG00000264824 MIR5571 - microRNA 5571 ncRNA chr11-7564 chr11 26155544 26155754 + 9.31 0.000 Intergenic Intergenic -33474 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr1-8916 chr1 6803498 6803708 + 9.31 0.000 intron (NR_146204, intron 1 of 2) Tigger15a|DNA|TcMar-Tigger 18149 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr4-5786 chr4 79042610 79042820 + 9.31 0.000 intron (NR_038342, intron 2 of 5) MIR3|SINE|MIR 70967 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA chr8-1911 chr8 33628614 33628824 + 9.31 0.000 Intergenic Intergenic -28613 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr2-7721 chr2 34345664 34345874 + 9.31 0.000 Intergenic Intergenic 278543 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr5-4042 chr5 39946492 39946702 + 9.31 0.000 Intergenic L2c|LINE|L2 -105694 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr8-2623 chr8 63012191 63012401 + 9.31 0.000 Intergenic AluSz|SINE|Alu 26510 NM_003878 8836 Hs.78619 NM_003878 ENSG00000137563 GGH GH gamma-glutamyl hydrolase protein-coding chr9-2274 chr9 122088183 122088393 + 9.31 0.000 intron (NM_194252, intron 1 of 3) intron (NM_194252, intron 1 of 3) 5318 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr16-6776 chr16 77245585 77245795 + 9.31 0.000 Intergenic LTR16B1|LTR|ERVL 46282 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding chr17-7825 chr17 40809673 40809883 + 9.31 0.000 Intergenic Intergenic -9367 NR_160887 147184 Hs.353163 NM_145274 ENSG00000167920 TMEM99 - transmembrane protein 99 (putative) ncRNA chr7-9327 chr7 128769060 128769270 + 9.31 0.000 exon (NM_001219, exon 7 of 7) exon (NM_001219, exon 7 of 7) 6625 NM_001708 611 Hs.656404 NM_001708 ENSG00000128617 OPN1SW BCP|BOP|CBT opsin 1, short wave sensitive protein-coding chr4-7817 chr4 99202440 99202650 + 9.31 0.000 TTS (NM_000672) TTS (NM_000672) 16701 NM_000672 130 Hs.586161 NM_000672 ENSG00000172955 ADH6 ADH-5 alcohol dehydrogenase 6 (class V) protein-coding chr11-4841 chr11 16358999 16359209 + 9.31 0.000 intron (NM_001367872, intron 3 of 16) L2c|LINE|L2 -2558 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr1-8133 chr1 10842528 10842738 + 9.31 0.000 Intergenic L2a|LINE|L2 -45987 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr18-1321 chr18 74608538 74608748 + 9.31 0.000 Intergenic AluSz|SINE|Alu -10808 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr2-7016 chr2 149563455 149563665 + 9.31 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -23798 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr4-3672 chr4 40797134 40797344 + 9.31 0.000 intron (NM_024677, intron 9 of 11) L2-1_AMi|LINE|L2 47284 NM_024677 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr17-3699 chr17 17119204 17119414 + 9.31 0.000 intron (NM_201274, intron 3 of 23) intron (NM_201274, intron 3 of 23) 76549 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr4-4103 chr4 6085480 6085690 + 9.31 0.000 exon (NM_001306134, exon 3 of 12) exon (NM_001306134, exon 3 of 12) -67039 NM_001364690 389197 Hs.479065 NM_207405 ENSG00000181215 C4orf50 - chromosome 4 open reading frame 50 protein-coding chr1-13959 chr1 24591942 24592152 + 9.31 0.000 intron (NM_001010980, intron 1 of 3) intron (NM_001010980, intron 1 of 3) 35960 NM_001010980 400746 Hs.200253 NM_001010980 ENSG00000184454 NCMAP C1orf130|MP11 non-compact myelin associated protein protein-coding chrX-3331 chrX 129435651 129435861 + 9.31 0.000 Intergenic Intergenic 87734 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr4-7909 chr4 106922898 106923108 + 9.31 0.000 3' UTR (NM_014421, exon 4 of 4) 3' UTR (NM_014421, exon 4 of 4) 113310 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr22-3772 chr22 28313297 28313507 + 9.31 0.000 intron (NM_001145418, intron 2 of 22) L1P2|LINE|L1 -146467 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr1-12717 chr1 54856499 54856709 + 9.31 0.000 intron (NM_014762, intron 6 of 8) AluSx1|SINE|Alu 30591 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr2-6535 chr2 207070893 207071103 + 9.31 0.000 Intergenic MamTip2|DNA|hAT-Tip100 39075 NR_036227 100423036 NR_036227 ENSG00000253008 MIR2355 mir-2355 microRNA 2355 ncRNA chr1-9049 chr1 12752184 12752394 + 9.31 0.000 intron (NM_001330361, intron 1 of 2) L1MB3|LINE|L1 6089 NM_001330361 93190 Hs.98095 NM_152290 ENSG00000157330 C1orf158 - chromosome 1 open reading frame 158 protein-coding chr2-11277 chr2 181575122 181575332 + 9.31 0.000 intron (NR_027690, intron 2 of 11) intron (NR_027690, intron 2 of 11) 81878 NM_201548 375298 Hs.732358 NM_201548 ENSG00000188452 CERKL RP26 ceramide kinase like protein-coding chr3-6278 chr3 71905855 71906065 + 9.31 0.000 Intergenic L2c|LINE|L2 -120812 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr9-6115 chr9 5889616 5889826 + 9.31 0.000 Intergenic AluSc|SINE|Alu -1168 NM_005511 2315 Hs.154069 NM_005511 ENSG00000120215 MLANA MART-1|MART1 melan-A protein-coding chr11-8504 chr11 122084025 122084235 + 9.31 0.000 intron (NR_137178, intron 1 of 4) intron (NR_137178, intron 1 of 4) 15714 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr8-2004 chr8 97350147 97350357 + 9.31 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) -8013 NR_145760 109617016 NR_145760 ENSG00000207215 SNORD3H - small nucleolar RNA, C/D box 3H snoRNA chr11-5204 chr11 12852014 12852224 + 9.31 0.000 intron (NM_021961, intron 3 of 12) L2c|LINE|L2 137429 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr8-4841 chr8 28434768 28434978 + 9.31 0.000 intron (NM_001258211, intron 6 of 7) LTR28|LTR|ERV1 -48413 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr10-3994 chr10 132143204 132143414 + 9.31 0.000 intron (NM_001323086, intron 11 of 23) intron (NM_001323086, intron 11 of 23) -43639 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr8-5571 chr8 81643815 81644025 + 9.31 0.000 Intergenic Intergenic -12643 NR_146081 650747 NR_146081 IMPA1P1 IMPA1P inositol monophosphatase 1 pseudogene 1 pseudo chr8-2638 chr8 69401265 69401475 + 9.31 0.000 Intergenic Intergenic 46874 NR_110433 100505739 Hs.127115 NR_110433 LINC01603 - long intergenic non-protein coding RNA 1603 ncRNA chr7-2614 chr7 546989 547199 + 9.31 0.000 Intergenic L1MD1|LINE|L1 -14864 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chr10-7031 chr10 79275648 79275858 + 9.31 0.000 intron (NM_020338, intron 7 of 24) MIRc|SINE|MIR -71716 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr7-6834 chr7 44131016 44131226 + 9.31 0.000 Intergenic Intergenic -7551 NM_006230 5425 Hs.306791 NM_006230 ENSG00000106628 POLD2 - DNA polymerase delta 2, accessory subunit protein-coding chr17-2229 chr17 2756002 2756212 + 9.31 0.000 Intergenic CpG -6455 NM_001355573 101928991 NM_001355573 CCDC92B - coiled-coil domain containing 92B protein-coding chr14-4417 chr14 31450225 31450435 + 9.31 0.000 intron (NM_080664, intron 2 of 2) intron (NM_080664, intron 2 of 2) 7176 NM_080664 112487 Hs.116014 NM_080664 ENSG00000129480 DTD2 ATD|C14orf126 D-aminoacyl-tRNA deacylase 2 protein-coding chr19-2035 chr19 2436606 2436816 + 9.31 0.000 intron (NM_032737, intron 4 of 11) CpG -1711 NR_106958 102466806 NR_106958 ENSG00000283728 MIR7108 hsa-mir-7108 microRNA 7108 ncRNA chr1-6334 chr1 4428787 4428997 + 9.31 0.000 Intergenic MER21C|LTR|ERVL 16841 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr14-4579 chr14 49685943 49686153 + 9.31 0.000 intron (NM_001348385, intron 1 of 18) intron (NM_001348385, intron 1 of 18) 2166 NM_001197331 5427 Hs.162777 NM_002692 ENSG00000100479 POLE2 DPE2 DNA polymerase epsilon 2, accessory subunit protein-coding chr3-9965 chr3 95633961 95634171 + 9.31 0.000 Intergenic MIR3|SINE|MIR 49127 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr9-7175 chr9 135255050 135255260 + 9.31 0.000 Intergenic Intergenic 73546 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chr8-2789 chr8 121158414 121158624 + 9.31 0.000 Intergenic Intergenic -346473 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr9-3834 chr9 130199368 130199578 + 9.31 0.000 promoter-TSS (NM_001128826) promoter-TSS (NM_001128826) -927 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chrX-2489 chrX 88385019 88385229 + 9.31 0.000 Intergenic L1PA17|LINE|L1 -362101 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr12-8379 chr12 132680826 132681036 + 9.31 0.000 intron (NM_006231, intron 2 of 48) intron (NM_006231, intron 2 of 48) 6593 NM_006231 5426 Hs.524871 NM_006231 ENSG00000177084 POLE CRCS12|FILS|IMAGEI|POLE1 DNA polymerase epsilon, catalytic subunit protein-coding chr7-5251 chr7 18158528 18158738 + 9.31 0.000 intron (NM_001204144, intron 1 of 12) MIRc|SINE|MIR -31324 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr3-8420 chr3 108936747 108936957 + 9.31 0.000 intron (NM_001363884, intron 1 of 3) intron (NM_001363884, intron 1 of 3) 16994 NM_001363884 9626 Hs.233363 NM_005459 ENSG00000138472 GUCA1C GCAP3 guanylate cyclase activator 1C protein-coding chr19-5040 chr19 48945659 48945869 + 9.31 0.000 TTS (NM_014475) TTS (NM_014475) -9096 NM_001291430 581 Hs.624291 NM_004324 ENSG00000087088 BAX BCL2L4 BCL2 associated X, apoptosis regulator protein-coding chrX-4163 chrX 31841447 31841657 + 9.31 0.000 intron (NM_004009, intron 48 of 78) Tigger1|DNA|TcMar-Tigger 313917 NM_004013 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chrX-5220 chrX 135497453 135497663 + 9.31 0.000 Intergenic L2c|LINE|L2 -23102 NM_001351601 203522 Hs.496829 NM_182540 ENSG00000165359 INTS6L DDX26B integrator complex subunit 6 like protein-coding chr16-6766 chr16 75925302 75925512 + 9.31 0.000 Intergenic L1PB1|LINE|L1 -198917 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr8-3548 chr8 124443256 124443466 + 9.31 0.000 Intergenic PRIMA41-int|LTR|ERV1 -7459 NM_017956 55039 Hs.9925 NM_017956 ENSG00000183665 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog protein-coding chr12-7551 chr12 71777764 71777974 + 9.31 0.000 intron (NM_014999, intron 4 of 6) L3|LINE|CR1 23006 NM_014999 23011 Hs.524590 NM_014999 ENSG00000080371 RAB21 - RAB21, member RAS oncogene family protein-coding chrX-3455 chrX 25413499 25413709 + 9.31 0.000 Intergenic L1ME4a|LINE|L1 -397639 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr3-3342 chr3 13261514 13261724 + 9.31 0.000 Intergenic Intergenic 158703 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr9-3553 chr9 38583944 38584154 + 9.31 0.000 intron (NM_001331100, intron 14 of 17) MER61C|LTR|ERV1 36547 NM_001331100 253650 Hs.644630 NM_147195 ENSG00000180071 ANKRD18A - ankyrin repeat domain 18A protein-coding chr2-13998 chr2 190884983 190885193 + 9.31 0.000 intron (NM_014905, intron 1 of 17) intron (NM_014905, intron 1 of 17) 4267 NM_001256310 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr3-3770 chr3 11177816 11178026 + 9.31 0.000 intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) 23428 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr17-3265 chr17 35373667 35373877 + 9.31 0.000 promoter-TSS (NM_001104587) promoter-TSS (NM_001104587) -151 NM_001104589 91607 Hs.745059 NM_152270 ENSG00000172716 SLFN11 SLFN8/9 schlafen family member 11 protein-coding chr3-5202 chr3 73785057 73785267 + 9.31 0.000 Intergenic Intergenic -24082 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr6-6974 chr6 18400986 18401196 + 9.31 0.000 intron (NM_182757, intron 2 of 7) intron (NM_182757, intron 2 of 7) 13741 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr7-3997 chr7 139744267 139744477 + 9.31 0.000 intron (NM_001113239, intron 1 of 14) L1MB7|LINE|L1 33626 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr17-7728 chr17 33392676 33392886 + 9.31 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -99793 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr11-8524 chr11 126122777 126122987 + 9.31 0.000 Intergenic Intergenic -59590 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr15-2751 chr15 24951923 24952133 + 9.31 0.000 intron (NM_001349456, intron 4 of 12) L1MB7|LINE|L1 -2865 NM_003097 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr6-4036 chr6 129976479 129976689 + 9.31 0.000 Intergenic MER1B|DNA|hAT-Charlie -41785 NM_032438 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr1-5105 chr1 121518877 121519087 + 9.31 0.000 promoter-TSS (NR_003955) promoter-TSS (NR_003955) -130 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo chr2-12516 chr2 64649616 64649826 + 9.31 0.000 intron (NM_014755, intron 1 of 1) intron (NM_014755, intron 1 of 1) 4192 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr9-2133 chr9 110197844 110198054 + 9.31 0.000 Intergenic LTR78B|LTR|ERV1 10184 NM_001012993 401546 Hs.125608 NM_001012993 ENSG00000188959 C9orf152 bA470J20.2 chromosome 9 open reading frame 152 protein-coding chr6-1415 chr6 138692432 138692642 + 9.31 0.000 intron (NR_033896, intron 1 of 3) CpG 869 NR_033896 441172 Hs.92290 NR_033896 FLJ46906 - uncharacterized LOC441172 ncRNA chr22-2740 chr22 39575031 39575241 + 9.31 0.000 intron (NM_001003406, intron 1 of 35) intron (NM_001003406, intron 1 of 35) 4383 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr3-9351 chr3 46595743 46595953 + 9.31 0.000 Intergenic Intergenic -16677 NM_001195442 100132146 Hs.679623 NM_001195442 ENSG00000283473 FAM240A - family with sequence similarity 240 member A protein-coding chr5-3671 chr5 166512399 166512609 + 9.31 0.000 Intergenic Intergenic 413866 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr3-9918 chr3 86971141 86971351 + 9.31 0.000 intron (NM_001320494, intron 2 of 3) intron (NM_001320494, intron 2 of 3) 19903 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr4-4339 chr4 36849837 36850047 + 9.31 0.000 Intergenic Intergenic -151837 NR_134669 100508631 Hs.397553 NR_134669 ENSG00000261761 LINC02616 - long intergenic non-protein coding RNA 2616 ncRNA chr3-5185 chr3 68896134 68896344 + 9.31 0.000 intron (NM_001005527, intron 1 of 5) L2a|LINE|L2 36308 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr4-4591 chr4 76246098 76246308 + 9.31 0.000 intron (NM_001242936, intron 2 of 7) MamRep38|DNA|hAT -5497 NM_001242939 100631383 Hs.720509 NM_001242939 ENSG00000272414 FAM47E-STBD1 FAM47E FAM47E-STBD1 readthrough protein-coding chr10-7165 chr10 103526767 103526977 + 9.31 0.000 intron (NM_004210, intron 1 of 5) L1MA5|LINE|L1 -9430 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr17-2105 chr17 1276141 1276351 + 9.31 0.000 Intergenic Intergenic -3416 NM_172367 286753 Hs.146059 NM_172367 ENSG00000184811 TRARG1 BEC-1|DSPB1|IFITMD3|LOST1|TUSC5 trafficking regulator of GLUT4 (SLC2A4) 1 protein-coding chr6-3547 chr6 44194409 44194619 + 9.31 0.000 Intergenic Intergenic -22412 NM_001315494 101929726 Hs.438979 NM_001315494 ENSG00000262179 MYMX MINION|hMINION myomixer, myoblast fusion factor protein-coding chr16-3082 chr16 65782761 65782971 + 9.31 0.000 Intergenic Intergenic -206566 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr11-3135 chr11 45906509 45906719 + 9.31 0.000 TTS (NM_005456) TTS (NM_005456) 657 NM_001080446 143678 NM_001080446 ENSG00000234776 C11orf94 - chromosome 11 open reading frame 94 protein-coding chr10-1855 chr10 71051028 71051238 + 9.31 0.000 Intergenic Intergenic 112080 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr20-1339 chr20 3878352 3878562 + 9.31 0.000 Intergenic L1MC5|LINE|L1 -10324 NM_024960 80025 Hs.114180 NM_024960 ENSG00000125779 PANK2 C20orf48|HARP|HSS|NBIA1|PKAN pantothenate kinase 2 protein-coding chr15-3471 chr15 94715133 94715343 + 9.31 0.000 Intergenic L2a|LINE|L2 -140125 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr2-4746 chr2 9703324 9703534 + 9.31 0.000 Intergenic Intergenic -72432 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr11-2981 chr11 96155746 96155956 + 9.31 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -185587 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr4-8722 chr4 183565966 183566176 + 9.31 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 59989 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr6-4782 chr6 75818461 75818671 + 9.31 0.000 intron (NM_001300899, intron 2 of 32) intron (NM_001300899, intron 2 of 32) 69327 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr22-1723 chr22 20012454 20012664 + 9.31 0.000 intron (NM_001670, intron 1 of 19) intron (NM_001670, intron 1 of 19) 4264 NM_001670 421 Hs.713616 NM_001670 ENSG00000099889 ARVCF - ARVCF delta catenin family member protein-coding chr6-3110 chr6 98551048 98551258 + 9.31 0.000 Intergenic Intergenic 280547 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr14-1341 chr14 81455837 81456047 + 9.31 0.000 Intergenic Intergenic -5785 NR_109999 100506700 Hs.116304 NR_109999 ENSG00000258675 LINC02308 - long intergenic non-protein coding RNA 2308 ncRNA chr6-1550 chr6 106159758 106159968 + 9.31 0.000 Intergenic MIR|SINE|MIR 60922 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr11-2925 chr11 67161392 67161602 + 9.31 0.000 intron (NR_027473, intron 2 of 20) MER112|DNA|hAT-Charlie 42234 NR_027473 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr16-1814 chr16 30802473 30802683 + 9.31 0.000 Intergenic Intergenic -15373 NM_001345970 23361 Hs.301094 NM_001080417 ENSG00000102870 ZNF629 ZNF|ZNF65 zinc finger protein 629 protein-coding chr16-991 chr16 2003912 2004122 + 9.31 0.000 intron (NM_178167, intron 3 of 13) CpG 5804 NM_178167 90850 Hs.343828 NM_178167 ENSG00000167962 ZNF598 HEL2 zinc finger protein 598 protein-coding chr15-3833 chr15 77905777 77905987 + 9.31 0.000 Intergenic Intergenic 20964 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr15-4179 chr15 98192660 98192870 + 9.31 0.000 Intergenic Intergenic -104012 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chr11-8527 chr11 126789195 126789405 + 9.31 0.000 intron (NM_001301097, intron 1 of 15) L2|LINE|L2 133214 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr14-3181 chr14 71291176 71291386 + 9.31 0.000 Intergenic Intergenic -29195 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr17-4617 chr17 6847454 6847664 + 9.31 0.000 Intergenic L1P3|LINE|L1 -6017 NR_002710 245 Hs.378695 NR_002710 ENSG00000262943 ALOX12P2 ALOX12E arachidonate 12-lipoxygenase pseudogene 2 pseudo chr8-6710 chr8 85076563 85076773 + 9.31 0.000 Intergenic Intergenic -30570 NM_033402 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chr2-6966 chr2 125791619 125791829 + 9.31 0.000 Intergenic Intergenic 326261 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr14-1072 chr14 102676966 102677176 + 9.31 0.000 intron (NM_015156, intron 2 of 11) SVA_D|Retroposon|SVA 84422 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr2-13189 chr2 121083495 121083705 + 9.31 0.000 Intergenic MIR|SINE|MIR 201602 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr5-2670 chr5 34022365 34022575 + 9.31 0.000 intron (NR_037951, intron 5 of 8) MLT1J2-int|LTR|ERVL-MaLR -14420 NM_001167595 23600 Hs.508343 NM_014324 ENSG00000242110 AMACR AMACRD|CBAS4|P504S|RACE|RM alpha-methylacyl-CoA racemase protein-coding chr19-4498 chr19 6088113 6088323 + 9.31 0.000 intron (NM_000635, intron 1 of 17) AluSp|SINE|Alu 22282 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr9-2623 chr9 18085458 18085668 + 9.31 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -388590 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr12-6330 chr12 54988485 54988695 + 9.31 0.000 Intergenic Intergenic -3828 NM_001351149 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|ITPRID3|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr16-5266 chr16 55086655 55086865 + 9.31 0.000 Intergenic MER20|DNA|hAT-Charlie 155561 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr3-9599 chr3 56475285 56475495 + 9.31 0.000 Intergenic Intergenic -6923 NR_132749 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr12-7390 chr12 57257794 57258004 + 9.31 0.000 intron (NM_001351215, intron 20 of 22) intron (NM_001351215, intron 20 of 22) -6712 NM_001286257 246329 Hs.417595 NM_145064 ENSG00000185482 STAC3 MYPBB|NAM SH3 and cysteine rich domain 3 protein-coding chr15-1812 chr15 33031313 33031523 + 9.31 0.000 intron (NM_001277313, intron 6 of 20) intron (NM_001277313, intron 6 of 20) 36756 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr14-2338 chr14 104261352 104261562 + 9.31 0.000 intron (NR_146612, intron 1 of 2) L1ME1|LINE|L1 37873 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr1-7117 chr1 202009547 202009757 + 9.31 0.000 promoter-TSS (NM_004433) promoter-TSS (NM_004433) 701 NR_146472 102723465 Hs.661033 NR_146472 ELF3-AS1 SCAT7 ELF3 antisense RNA 1 ncRNA chr4-7966 chr4 112333277 112333487 + 9.31 0.000 intron (NM_001102406, intron 2 of 15) ERVL-E-int|LTR|ERVL 36013 NM_001102406 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr13-3816 chr13 46743465 46743675 + 9.31 0.000 3' UTR (NM_015116, exon 19 of 19) 3' UTR (NM_015116, exon 19 of 19) 53591 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr12-4008 chr12 29023176 29023386 + 9.31 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -125997 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr8-3127 chr8 62381984 62382194 + 9.31 0.000 intron (NM_001304533, intron 1 of 6) Tigger2|DNA|TcMar-Tigger 133235 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr1-6688 chr1 53459452 53459662 + 9.31 0.000 exon (NM_033067, exon 1 of 4) exon (NM_033067, exon 1 of 4) 158 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr8-1466 chr8 19608058 19608268 + 9.31 0.000 intron (NR_148898, intron 1 of 9) intron (NR_148898, intron 1 of 9) -5618 NM_001354491 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr3-3845 chr3 32957060 32957270 + 9.31 0.000 TTS (NM_005508) TTS (NM_005508) 5521 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr4-3707 chr4 60934757 60934967 + 9.31 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 12243 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr12-7703 chr12 90575020 90575230 + 9.31 0.000 Intergenic L1MA3|LINE|L1 281807 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr2-7645 chr2 28054531 28054741 + 9.31 0.000 intron (NM_199193, intron 7 of 13) MLT1A0|LTR|ERVL-MaLR 58269 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA chr6-8144 chr6 129825252 129825462 + 9.31 0.000 Intergenic AluJo|SINE|Alu 35958 NM_001010876 253582 NM_001010876 ENSG00000203756 TMEM244 C6orf191|bA174C7.4 transmembrane protein 244 protein-coding chr1-3436 chr1 12681102 12681312 + 9.31 0.000 Intergenic Intergenic -34903 NM_001103170 126767 Hs.464705 NM_001103169 ENSG00000188984 AADACL3 - arylacetamide deacetylase like 3 protein-coding chr22-1584 chr22 48244376 48244586 + 9.31 0.000 Intergenic Intergenic -29883 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr7-7206 chr7 16411619 16411829 + 9.31 0.000 intron (NM_001101426, intron 1 of 9) intron (NM_001101426, intron 1 of 9) 9814 NR_160656 729920 Hs.636502 NM_001101417 ENSG00000214960 CRPPA ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD CDP-L-ribitol pyrophosphorylase A protein-coding chr3-7482 chr3 142994278 142994488 + 9.31 0.000 intron (NR_125393, intron 3 of 4) intron (NR_125393, intron 3 of 4) 7084 NR_034032 100289361 Hs.599649 NR_034032 ENSG00000268129 LOC100289361 - uncharacterized LOC100289361 ncRNA chr7-9200 chr7 116434890 116435100 + 9.31 0.000 Intergenic L2c|LINE|L2 -64743 NM_198212 858 Hs.212332 NM_001233 ENSG00000105971 CAV2 CAV caveolin 2 protein-coding chr12-7668 chr12 84517341 84517551 + 9.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR 395353 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr8-2781 chr8 119982394 119982604 + 9.31 0.000 intron (NM_022783, intron 4 of 8) intron (NM_022783, intron 4 of 8) 108777 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr2-11604 chr2 2742836 2743046 + 9.31 0.000 Intergenic Intergenic 383085 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr10-5852 chr10 114057409 114057619 + 9.31 0.000 Intergenic Intergenic 13648 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr10-2566 chr10 69845980 69846190 + 9.31 0.000 intron (NM_001368898, intron 3 of 33) intron (NM_001368898, intron 3 of 33) 44179 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr12-4051 chr12 50056099 50056309 + 9.31 0.000 Intergenic Intergenic -1392 NM_020039 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr18-1743 chr18 6747759 6747969 + 9.31 0.000 intron (NM_001366230, intron 1 of 17) intron (NM_001366230, intron 1 of 17) -18002 NR_134645 101927168 Hs.242240 NR_134645 LOC101927168 - uncharacterized LOC101927168 ncRNA chr17-5309 chr17 27609921 27610131 + 9.31 0.000 intron (NM_014238, intron 17 of 20) intron (NM_014238, intron 17 of 20) -21162 NM_009587 3965 Hs.81337 NM_002308 ENSG00000168961 LGALS9 HUAT|LGALS9A galectin 9 protein-coding chr1-15267 chr1 114292417 114292627 + 9.31 0.000 Intergenic Intergenic -138653 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr9-2787 chr9 114434820 114435030 + 9.31 0.000 intron (NM_001083885, intron 3 of 11) L2b|LINE|L2 -8757 NM_001346890 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr10-6108 chr10 132487644 132487854 + 9.31 0.000 Intergenic Intergenic 42560 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr5-4271 chr5 141617785 141617995 + 9.31 0.000 intron (NM_005219, intron 1 of 27) intron (NM_005219, intron 1 of 27) 1110 NM_001314007 1729 Hs.529451 NM_005219 ENSG00000131504 DIAPH1 DFNA1|DIA1|DRF1|LFHL1|SCBMS|hDIA1 diaphanous related formin 1 protein-coding chr12-4721 chr12 50445011 50445221 + 9.31 0.000 intron (NM_001352308, intron 8 of 14) AluJo|SINE|Alu -11455 NR_132753 106633800 NR_132753 SNORD133 ZL142|ZL42|ggn68 small nucleolar RNA, C/D box 133 snoRNA chr9-4057 chr9 111873965 111874175 + 9.31 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -22744 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr1-4238 chr1 201655886 201656096 + 9.31 0.000 intron (NM_020443, intron 1 of 29) intron (NM_020443, intron 1 of 29) 7669 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr9-7823 chr9 82154926 82155136 + 9.31 0.000 Intergenic Intergenic 166259 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr6-1645 chr6 133404276 133404486 + 9.31 0.000 intron (NM_172103, intron 3 of 18) intron (NM_172103, intron 3 of 18) 162882 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr20-1774 chr20 53791101 53791311 + 9.31 0.000 Intergenic Intergenic 84503 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr11-6262 chr11 57649129 57649339 + 9.31 0.000 intron (NM_001363487, intron 1 of 5) intron (NM_001363487, intron 1 of 5) 678 NM_145008 219539 Hs.135978 NM_145008 ENSG00000166793 YPEL4 - yippee like 4 protein-coding chr20-2968 chr20 35250459 35250669 + 9.31 0.000 intron (NM_006690, intron 2 of 8) AluSx|SINE|Alu 23874 NM_006690 10893 Hs.715494 NM_006690 ENSG00000125966 MMP24 MMP-24|MMP25|MT-MMP 5|MT-MMP5|MT5-MMP|MT5MMP|MTMMP5 matrix metallopeptidase 24 protein-coding chr20-2197 chr20 53162243 53162453 + 9.31 0.000 intron (NM_173485, intron 1 of 2) intron (NM_173485, intron 1 of 2) -22935 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr17-2701 chr17 59680373 59680583 + 9.31 0.000 intron (NM_001288653, intron 18 of 31) intron (NM_001288653, intron 18 of 31) 27120 NM_001015509 51651 Hs.12677 NM_016077 ENSG00000141378 PTRH2 BIT1|CFAP37|CGI-147|IMNEPD|PTH|PTH 2|PTH2 peptidyl-tRNA hydrolase 2 protein-coding chr20-1131 chr20 35344455 35344665 + 9.31 0.000 intron (NM_001184977, intron 5 of 7) intron (NM_001184977, intron 5 of 7) -52135 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr2-7280 chr2 235292782 235292992 + 9.31 0.000 Intergenic Intergenic -201156 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr14-3788 chr14 59921319 59921529 + 9.31 0.000 intron (NR_075071, intron 1 of 32) L2c|LINE|L2 1711 NM_001355272 341883 Hs.666245 NM_198499 ENSG00000131951 LRRC9 - leucine rich repeat containing 9 protein-coding chrX-3131 chrX 13380191 13380401 + 9.31 0.000 Intergenic Intergenic 45055 NR_045260 100133123 Hs.449499 NR_045260 ENSG00000226985 LINC01203 - long intergenic non-protein coding RNA 1203 ncRNA chr9-6417 chr9 69260892 69261102 + 9.31 0.000 Intergenic MIR|SINE|MIR 46059 NR_047671 100885775 Hs.49768 NR_047671 ENSG00000278910 BANCR LINC00586 BRAF-activated non-protein coding RNA ncRNA chr18-3491 chr18 73044604 73044814 + 9.31 0.000 Intergenic AluY|SINE|Alu 175669 NR_134647 100505797 Hs.145111 NR_134647 ENSG00000263958 LOC100505797 - myosin heavy chain IB-like ncRNA chr10-4859 chr10 15008312 15008522 + 9.31 0.000 Intergenic Intergenic 27008 NR_144469 105376432 Hs.723069 NR_144469 DCLRE1CP1 - DNA cross-link repair 1C pseudogene 1 pseudo chr10-5232 chr10 64344286 64344496 + 9.31 0.000 Intergenic LTR40a|LTR|ERVL -481137 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr16-2371 chr16 64196548 64196758 + 9.31 0.000 Intergenic Intergenic 925410 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr6-5846 chr6 35291467 35291677 + 9.31 0.000 exon (NM_003427, exon 9 of 14) exon (NM_003427, exon 9 of 14) -6246 NM_022047 50619 Hs.15476 NM_022047 ENSG00000023892 DEF6 IBP|SLAT|SWAP70L DEF6 guanine nucleotide exchange factor protein-coding chr3-5635 chr3 10839447 10839657 + 9.31 0.000 intron (NM_014229, intron 4 of 13) intron (NM_014229, intron 4 of 13) 23324 NM_001317406 6538 Hs.655078 NM_014229 ENSG00000132164 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 member 11 protein-coding chr13-1633 chr13 53142489 53142699 + 9.31 0.000 intron (NR_125788, intron 4 of 4) L2c|LINE|L2 9306 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr3-5557 chr3 4323246 4323456 + 9.31 0.000 Intergenic L1MB7|LINE|L1 20047 NM_001320676 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr20-2819 chr20 59083077 59083287 + 9.31 0.000 Intergenic L2a|LINE|L2 -40336 NR_037929 100533975 Hs.656865 NR_037929 SLMO2-ATP5E - SLMO2-ATP5E readthrough ncRNA chrX-935 chrX 39623052 39623262 + 9.31 0.000 Intergenic Intergenic -38059 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr3-5052 chr3 39012251 39012461 + 9.31 0.000 intron (NM_001349253, intron 2 of 29) intron (NM_001349253, intron 2 of 29) 39588 NM_001349253 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr12-2154 chr12 115992014 115992224 + 9.31 0.000 intron (NM_015335, intron 16 of 30) intron (NM_015335, intron 16 of 30) 156535 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr10-5901 chr10 118834636 118834846 + 9.31 0.000 Intergenic THE1C|LTR|ERVL-MaLR -79771 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr9-5675 chr9 123547881 123548091 + 9.31 0.000 intron (NM_001352968, intron 12 of 18) MIRb|SINE|MIR -62364 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr20-2039 chr20 1665188 1665398 + 9.31 0.000 Intergenic Intergenic -7514 NM_018556 55423 Hs.590883 NM_018556 ENSG00000089012 SIRPG CD172g|SIRP-B2|SIRPB2|SIRPgamma|bA77C3.1 signal regulatory protein gamma protein-coding chr12-6694 chr12 4044909 4045119 + 9.31 0.000 Intergenic Intergenic -171566 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr3-3103 chr3 141092866 141093076 + 9.31 0.000 intron (NM_080862, intron 2 of 2) MIRb|SINE|MIR 41624 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr7-3763 chr7 78100122 78100332 + 9.31 0.000 intron (NM_001301128, intron 19 of 20) intron (NM_001301128, intron 19 of 20) -247015 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr4-8489 chr4 159587937 159588147 + 9.31 0.000 Intergenic MSTA|LTR|ERVL-MaLR 189742 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr5-8042 chr5 91266241 91266451 + 9.31 0.000 Intergenic L1ME1|LINE|L1 48056 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr1-9915 chr1 73867106 73867316 + 9.31 0.000 Intergenic AluJr|SINE|Alu 192532 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA chr14-1815 chr14 42027437 42027647 + 9.31 0.000 Intergenic Intergenic 420686 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr7-7586 chr7 127227848 127228058 + 9.31 0.000 intron (NR_110194, intron 2 of 2) intron (NR_110194, intron 2 of 2) 12826 NR_110194 101928333 Hs.551332 NR_110194 ENSG00000236340 LOC101928333 - uncharacterized LOC101928333 ncRNA chr6-5349 chr6 148344097 148344307 + 9.31 0.000 intron (NM_001346506, intron 1 of 20) MIRb|SINE|MIR 1364 NM_001346506 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr10-3966 chr10 113624668 113624878 + 9.31 0.000 intron (NM_198060, intron 22 of 41) intron (NM_198060, intron 22 of 41) 39268 NM_198060 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr19-2616 chr19 2805967 2806177 + 9.31 0.000 intron (NM_003249, intron 6 of 12) intron (NM_003249, intron 6 of 12) -13796 NM_001102651 115196 Hs.307043 NM_152303 ENSG00000172006 ZNF554 - zinc finger protein 554 protein-coding chr7-5888 chr7 94085397 94085607 + 9.31 0.000 Intergenic Intergenic -81147 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr6-2583 chr6 72534294 72534504 + 9.31 0.000 Intergenic Intergenic -87444 NM_001160130 56479 Hs.445324 NM_019842 ENSG00000185760 KCNQ5 Kv7.5|MRD46 potassium voltage-gated channel subfamily Q member 5 protein-coding chr8-2657 chr8 78758011 78758221 + 9.31 0.000 intron (NM_001199886, intron 2 of 4) THE1B|LTR|ERVL-MaLR -33742 NR_077236 101241902 Hs.388511 NR_077236 LOC101241902 - chromosome 4 open reading frame 46 pseudogene pseudo chr14-3586 chr14 30410421 30410631 + 9.31 0.000 Intergenic L1PA7|LINE|L1 -148597 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr12-8097 chr12 118629551 118629761 + 9.31 0.000 Intergenic MER47B|DNA|TcMar-Tigger 132023 NR_134998 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA chr2-8799 chr2 168006938 168007148 + 9.31 0.000 intron (NM_013233, intron 16 of 17) intron (NM_013233, intron 16 of 17) -65899 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr9-2188 chr9 133631914 133632124 + 9.31 0.000 Intergenic Intergenic -4344 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr4-3140 chr4 177008325 177008535 + 9.31 0.000 Intergenic L2a|LINE|L2 132728 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr4-4668 chr4 84728517 84728727 + 9.31 0.000 intron (NM_014991, intron 44 of 67) intron (NM_014991, intron 44 of 67) 145495 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr6-2715 chr6 48319337 48319547 + 9.31 0.000 Intergenic L2|LINE|L2 -250753 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr7-6390 chr7 152173776 152173986 + 9.31 0.000 intron (NM_170606, intron 39 of 58) intron (NM_170606, intron 39 of 58) 98844 NM_001371474 chr8-1840 chr8 143236761 143236971 + 9.31 0.000 Intergenic AluJb|SINE|Alu -10073 NM_001271156 286128 Hs.668016 NM_173832 ENSG00000181638 ZFP41 ZNF753|zfp-41 ZFP41 zinc finger protein protein-coding chr9-2339 chr9 38058220 38058430 + 9.31 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 10902 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr4-7065 chr4 30605842 30606052 + 9.31 0.000 Intergenic Intergenic -114422 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr16-5584 chr16 49526163 49526373 + 9.31 0.000 intron (NM_001271620, intron 5 of 7) L2a|LINE|L2 -7683 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr12-4967 chr12 75660148 75660358 + 9.31 0.000 Intergenic L3b|LINE|CR1 -148644 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr7-7305 chr7 43129064 43129274 + 9.31 0.000 intron (NR_135295, intron 3 of 6) Tigger1|DNA|TcMar-Tigger 11273 NR_135295 100127950 Hs.666610 NR_135295 ENSG00000181211 HECW1-IT1 - HECW1 intronic transcript 1 ncRNA chr2-5654 chr2 197137776 197137986 + 9.31 0.000 intron (NM_153697, intron 3 of 9) intron (NM_153697, intron 3 of 9) -60110 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr15-2208 chr15 90830777 90830987 + 9.31 0.000 Intergenic HAL1b|LINE|L1 -37706 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr1-6621 chr1 42788128 42788338 + 9.31 0.000 intron (NM_001354602, intron 1 of 5) intron (NM_001354602, intron 1 of 5) 3201 NM_001354602 100129924 Hs.720780 NM_001242750 ENSG00000274386 TMEM269 - transmembrane protein 269 protein-coding chr22-1691 chr22 46480514 46480724 + 9.31 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 57001 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr17-8206 chr17 63636444 63636654 + 9.31 0.000 intron (NM_203351, intron 3 of 16) intron (NM_203351, intron 3 of 16) 14132 NM_203351 4215 Hs.29282 NM_002401 ENSG00000198909 MAP3K3 MAPKKK3|MEKK3 mitogen-activated protein kinase kinase kinase 3 protein-coding chr16-5055 chr16 67236891 67237101 + 9.31 0.000 exon (NM_001318202, exon 10 of 24) exon (NM_001318202, exon 10 of 24) 9866 NM_014187 29100 Hs.433203 NM_014187 ENSG00000168701 TMEM208 HSPC171 transmembrane protein 208 protein-coding chr2-11716 chr2 10259030 10259240 + 9.31 0.000 Intergenic AluSz|SINE|Alu -43769 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr5-1281 chr5 149895940 149896150 + 9.31 0.000 intron (NM_000440, intron 12 of 21) MER103C|DNA|hAT-Charlie 36932 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr6-5679 chr6 108581351 108581561 + 9.31 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 20539 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr13-736 chr13 101554650 101554860 + 9.31 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 64803 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr9-3919 chr9 134856044 134856254 + 9.31 0.000 intron (NR_103451, intron 1 of 1) intron (NR_103451, intron 1 of 1) -5342 NR_039696 100616212 NR_039696 ENSG00000266514 MIR3689F mir-3689f microRNA 3689f ncRNA chr14-4163 chr14 77516074 77516284 + 9.31 0.000 intron (NM_004863, intron 11 of 11) intron (NM_004863, intron 11 of 11) -17363 NM_199296 145501 Hs.29742 NM_182509 ENSG00000100593 ISM2 TAIL1|THSD3 isthmin 2 protein-coding chr15-4175 chr15 95569204 95569414 + 9.31 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 136216 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr4-5222 chr4 168046472 168046682 + 9.31 0.000 Intergenic LTR1D|LTR|ERV1 -45960 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr9-7866 chr9 86187297 86187507 + 9.31 0.000 Intergenic L1PBa|LINE|L1 59862 NR_110996 101927623 Hs.575644 NR_110996 LOC101927623 - uncharacterized LOC101927623 ncRNA chr8-1981 chr8 79043532 79043742 + 9.31 0.000 Intergenic HAL1|LINE|L1 206108 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA chr21-1779 chr21 37398989 37399199 + 9.31 0.000 intron (NM_001347723, intron 1 of 10) intron (NM_001347723, intron 1 of 10) -19811 NM_130436 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr19-3523 chr19 42069142 42069352 + 9.31 0.000 intron (NM_001330519, intron 1 of 1) intron (NM_001330519, intron 1 of 1) 770 NM_001330519 64763 Hs.13323 NM_022752 ENSG00000105732 ZNF574 FP972 zinc finger protein 574 protein-coding chr1-5524 chr1 201614335 201614545 + 9.31 0.000 Intergenic Intergenic -33882 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr8-2654 chr8 73765723 73765933 + 9.31 0.000 Intergenic L1ME4a|LINE|L1 -18120 NM_001164384 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr16-5294 chr16 66706629 66706839 + 9.31 0.000 Intergenic Intergenic -9991 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr13-4039 chr13 73580479 73580689 + 9.31 0.000 intron (NR_047009, intron 1 of 2) intron (NR_047009, intron 1 of 2) 16340 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr14-1557 chr14 69260480 69260690 + 9.31 0.000 intron (NM_020692, intron 1 of 15) CpG 427 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr7-1855 chr7 1523701 1523911 + 9.31 0.000 Intergenic Intergenic -6896 NM_002360 7975 Hs.520612 NM_002360 ENSG00000198517 MAFK NFE2U|P18 MAF bZIP transcription factor K protein-coding chr18-3244 chr18 48949054 48949264 + 9.31 0.000 intron (NM_001190821, intron 1 of 3) intron (NM_001190821, intron 1 of 3) 174 NM_001190822 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr4-4726 chr4 91308237 91308447 + 9.31 0.000 intron (NM_001145065, intron 10 of 10) intron (NM_001145065, intron 10 of 10) 968960 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr9-7240 chr9 2965857 2966067 + 9.31 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -121867 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chr3-2844 chr3 29331602 29331812 + 9.31 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 50395 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr10-8423 chr10 85335579 85335789 + 9.31 0.000 Intergenic L1MA1|LINE|L1 97088 NR_120669 101929646 Hs.116129 NR_120669 LINC02647 - long intergenic non-protein coding RNA 2647 ncRNA chr13-3512 chr13 21648170 21648380 + 9.31 0.000 Intergenic Intergenic -22798 NM_002010 2254 Hs.111 NM_002010 ENSG00000102678 FGF9 FGF-9|GAF|HBFG-9|HBGF-9|SYNS3 fibroblast growth factor 9 protein-coding chr2-7537 chr2 22497900 22498110 + 9.31 0.000 Intergenic Intergenic -38474 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr1-10433 chr1 159092137 159092347 + 9.31 0.000 Intergenic Intergenic -15341 NM_001348247 9447 Hs.733411 NM_004833 ENSG00000163568 AIM2 PYHIN4 absent in melanoma 2 protein-coding chr17-3948 chr17 62078134 62078344 + 9.31 0.000 Intergenic MER66B|LTR|ERV1 -12961 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr12-8304 chr12 128208368 128208578 + 9.31 0.000 Intergenic MER68|LTR|ERVL -58930 NM_001136103 92293 Hs.49599 NM_001136103 ENSG00000181234 TMEM132C PPP1R152 transmembrane protein 132C protein-coding chr17-8526 chr17 79342580 79342790 + 9.31 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 173463 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chrX-515 chrX 149904264 149904474 + 9.31 0.000 Intergenic L1MCb|LINE|L1 -7363 NR_102703 101410537 Hs.573643 NR_102703 MAGEA8-AS1 - MAGEA8 antisense RNA 1 ncRNA chr12-3367 chr12 95836188 95836398 + 9.31 0.000 intron (NR_135014, intron 1 of 2) intron (NR_135014, intron 1 of 2) 22546 NR_135015 105369921 Hs.125549 NR_135014 ENSG00000258343 LOC105369921 - uncharacterized LOC105369921 ncRNA chrX-3566 chrX 70611171 70611381 + 9.31 0.000 intron (NM_001003811, intron 21 of 30) L1MC1|LINE|L1 -155282 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr8-4935 chr8 106062839 106063049 + 9.31 0.000 Intergenic LTR16E2|LTR|ERVL -2441 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr19-4232 chr19 49310625 49310835 + 9.31 0.000 intron (NM_014037, intron 2 of 11) intron (NM_014037, intron 2 of 11) -1862 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr11-4190 chr11 61420504 61420714 + 9.31 0.000 intron (NM_001136040, intron 3 of 9) intron (NM_001136040, intron 3 of 9) 9302 NM_024811 79869 Hs.718984 NM_024811 ENSG00000149532 CPSF7 CFIm59 cleavage and polyadenylation specific factor 7 protein-coding chr17-5243 chr17 17747144 17747354 + 9.31 0.000 intron (NM_030665, intron 2 of 5) Charlie19a|DNA|hAT-Charlie 19053 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chrX-2488 chrX 88123609 88123819 + 9.31 0.000 Intergenic L1PA13|LINE|L1 605912 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr20-1135 chr20 37571758 37571968 + 9.31 0.000 Intergenic MIRb|SINE|MIR -43932 NM_001167820 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr5-4154 chr5 94847695 94847905 + 9.31 0.000 intron (NM_001002796, intron 17 of 22) intron (NM_001002796, intron 17 of 22) 229131 NM_032290 84250 Hs.657315 NM_032290 ENSG00000133302 SLF1 ANKRD32|BRCTD1|BRCTx SMC5-SMC6 complex localization factor 1 protein-coding chr17-2962 chr17 63132697 63132907 + 9.31 0.000 intron (NM_025185, intron 4 of 25) intron (NM_025185, intron 4 of 25) 166567 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr12-2745 chr12 31536789 31536999 + 9.31 0.000 intron (NM_001308339, intron 1 of 22) L1MA3|LINE|L1 -53029 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr16-1937 chr16 2754209 2754419 + 9.31 0.000 intron (NM_016333, intron 1 of 14) AluSc5|SINE|Alu 1676 NM_016333 23524 Hs.433343 NM_016333 ENSG00000167978 SRRM2 300-KD|CWF21|Cwc21|HSPC075|SRL300|SRm300 serine/arginine repetitive matrix 2 protein-coding chr11-5289 chr11 40166219 40166429 + 9.31 0.000 intron (NM_020929, intron 3 of 4) L1ME3A|LINE|L1 126806 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr10-5416 chr10 77030029 77030239 + 9.31 0.000 intron (NM_001271519, intron 15 of 28) intron (NM_001271519, intron 15 of 28) -110697 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr6-7049 chr6 26284482 26284692 + 9.31 0.000 TTS (NM_003543) TTS (NM_003543) 912 NM_003543 8365 Hs.591790 NM_003543 ENSG00000158406 HIST1H4H H4/h|H4FH histone cluster 1 H4 family member h protein-coding chr22-3179 chr22 32083278 32083488 + 9.31 0.000 intron (NM_000343, intron 7 of 14) intron (NM_000343, intron 7 of 14) 24213 NM_001256314 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr16-6386 chr16 53269609 53269819 + 9.31 0.000 intron (NM_001352157, intron 21 of 37) L1MC5|LINE|L1 61263 NM_001352158 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr3-2995 chr3 99586760 99586970 + 9.31 0.000 Intergenic Intergenic -51729 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr9-5282 chr9 82897243 82897453 + 9.31 0.000 Intergenic Intergenic 165794 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr1-3681 chr1 159924833 159925043 + 9.31 0.000 promoter-TSS (NM_001277223) promoter-TSS (NM_001277223) -343 NM_001277223 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr5-5509 chr5 142817697 142817907 + 9.31 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 46575 NM_001349547 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr12-2563 chr12 110199664 110199874 + 9.31 0.000 intron (NR_144950, intron 14 of 18) intron (NR_144950, intron 14 of 18) 75412 NR_144950 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr9-5506 chr9 105091859 105092069 + 9.31 0.000 Intergenic L2c|LINE|L2 -152641 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr11-6464 chr11 67179288 67179498 + 9.31 0.000 intron (NR_027473, intron 2 of 20) AluSp|SINE|Alu 60130 NR_027473 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr17-3112 chr17 18132288 18132498 + 9.31 0.000 intron (NM_016239, intron 9 of 64) intron (NM_016239, intron 9 of 64) 23637 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr10-3700 chr10 107251580 107251790 + 9.31 0.000 Intergenic Intergenic -86979 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr11-7901 chr11 127943207 127943417 + 9.31 0.000 Intergenic Intergenic -265454 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr22-1321 chr22 50059189 50059399 + 9.31 0.000 TTS (NM_139202) TTS (NM_139202) -1067 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr17-5107 chr17 5108291 5108501 + 9.31 0.000 intron (NM_001320955, intron 3 of 3) intron (NM_001320955, intron 3 of 3) -3539 NR_135658 101928000 Hs.660048 NR_135657 ENSG00000234327 LOC101928000 - uncharacterized LOC101928000 ncRNA chr13-3951 chr13 61076211 61076421 + 9.31 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 123564 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr2-8660 chr2 148388773 148388983 + 9.31 0.000 intron (NM_018328, intron 5 of 14) L1PA17|LINE|L1 -255873 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr14-2183 chr14 99306756 99306966 + 9.31 0.000 Intergenic L1ME3A|LINE|L1 -34664 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr6-7830 chr6 103368311 103368521 + 9.31 0.000 Intergenic L2a|LINE|L2 1491130 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr18-3535 chr18 76382019 76382229 + 9.31 0.000 intron (NM_014643, intron 3 of 6) AluSx|SINE|Alu -109528 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr2-14549 chr2 230722323 230722533 + 9.31 0.000 intron (NM_001130849, intron 1 of 8) AluJo|SINE|Alu 8880 NM_001130849 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chrX-1464 chrX 108398058 108398268 + 9.31 0.000 intron (NM_001287758, intron 2 of 45) intron (NM_001287758, intron 2 of 45) 40259 NM_033641 1288 Hs.145586 NM_001847 ENSG00000197565 COL4A6 CXDELq22.3|DELXq22.3|DFNX6 collagen type IV alpha 6 chain protein-coding chr12-2155 chr12 116346801 116347011 + 9.31 0.000 Intergenic L1ME4c|LINE|L1 -69720 NM_015335 23389 Hs.603766 NM_015335 ENSG00000123066 MED13L MRFACD|PROSIT240|THRAP2|TRAP240L mediator complex subunit 13L protein-coding chr13-3244 chr13 31376641 31376851 + 9.31 0.000 Intergenic Intergenic 176771 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr6-5046 chr6 112369734 112369944 + 9.31 0.000 Intergenic Intergenic 22509 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr2-13880 chr2 179779952 179780162 + 9.31 0.000 intron (NR_148056, intron 1 of 9) MER5B|DNA|hAT-Charlie -33547 NM_001352815 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr1-8092 chr1 6112485 6112695 + 9.31 0.000 intron (NM_015557, intron 34 of 41) intron (NM_015557, intron 34 of 41) 66702 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr4-3812 chr4 113881369 113881579 + 9.31 0.000 Intergenic Intergenic 98173 NM_001354211 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr17-6777 chr17 2937828 2938038 + 9.31 0.000 intron (NM_001330058, intron 3 of 24) intron (NM_001330058, intron 3 of 24) 27962 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr17-2720 chr17 69223839 69224049 + 9.31 0.000 intron (NM_080282, intron 4 of 39) intron (NM_080282, intron 4 of 39) 11068 NR_130736 100133319 NR_130736 ENSG00000278873 PRO1804 - uncharacterized LOC100133319 ncRNA chr2-9337 chr2 225570232 225570442 + 9.31 0.000 intron (NM_001371273, intron 4 of 7) intron (NM_001371273, intron 4 of 7) 169451 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chrX-4971 chrX 114860862 114861072 + 9.31 0.000 intron (NM_001256760, intron 6 of 6) L1MA9|LINE|L1 37513 NR_029955 554212 NR_029955 ENSG00000199001 MIR448 MIRN448|hsa-mir-448|miRNA448 microRNA 448 ncRNA chr5-6428 chr5 156708433 156708643 + 9.31 0.000 intron (NM_001128209, intron 6 of 7) Charlie16a|DNA|hAT-Charlie -141757 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr9-1696 chr9 96020990 96021200 + 9.31 0.000 non-coding (NR_024129, exon 2 of 2) non-coding (NR_024129, exon 2 of 2) 716 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092 long intergenic non-protein coding RNA 92 ncRNA chr1-14170 chr1 32760196 32760406 + 9.31 0.000 intron (NM_001369553, intron 1 of 6) intron (NM_001369553, intron 1 of 6) -5326 NM_001198973 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr7-6558 chr7 55608898 55609108 + 9.31 0.000 Intergenic Intergenic -36501 NM_001321243 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr10-2053 chr10 91590625 91590835 + 9.31 0.000 intron (NR_024467, intron 1 of 4) intron (NR_024467, intron 1 of 4) 20730 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr13-1297 chr13 45028680 45028890 + 9.31 0.000 3' UTR (NM_018559, exon 8 of 8) 3' UTR (NM_018559, exon 8 of 8) 39247 NM_018559 55425 Hs.731811 NM_018559 ENSG00000133114 GPALPP1 AD029|KIAA1704|LSR7|bA245H20.2 GPALPP motifs containing 1 protein-coding chr11-3799 chr11 64910607 64910817 + 9.31 0.000 intron (NM_015104, intron 11 of 40) intron (NM_015104, intron 11 of 40) 6497 NM_001367971 23130 Hs.370671 NM_015104 ENSG00000110046 ATG2A - autophagy related 2A protein-coding chr2-5339 chr2 86064046 86064256 + 9.31 0.000 intron (NM_015425, intron 14 of 33) intron (NM_015425, intron 14 of 33) 41735 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr5-562 chr5 38323942 38324152 + 9.31 0.000 intron (NM_152403, intron 1 of 21) AluSz|SINE|Alu -33061 NR_046219 100852408 Hs.570954 NR_046219 ENSG00000248730 EGFLAM-AS4 - EGFLAM antisense RNA 4 ncRNA chr3-10312 chr3 126556021 126556231 + 9.31 0.000 intron (NR_130715, intron 1 of 5) intron (NR_130715, intron 1 of 5) 2806 NR_130715 152065 Hs.178210 NM_152533 ENSG00000180697 C3orf22 - chromosome 3 open reading frame 22 protein-coding chr4-6079 chr4 8236463 8236673 + 9.31 0.000 intron (NM_018986, intron 16 of 17) intron (NM_018986, intron 16 of 17) -33186 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr6-3476 chr6 4772208 4772418 + 9.31 0.000 intron (NM_001368125, intron 3 of 8) intron (NM_001368125, intron 3 of 8) -4091 NM_001368126 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr8-4329 chr8 99943000 99943210 + 9.31 0.000 Intergenic MER21-int|LTR|ERVL -49398 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr18-1443 chr18 31572851 31573061 + 9.31 0.000 Intergenic Intergenic -16045 NR_045216 100652770 Hs.562766 NR_045216 ENSG00000264859 DSG2-AS1 - DSG2 antisense RNA 1 ncRNA chr15-4642 chr15 63654097 63654307 + 9.31 0.000 exon (NM_003922, exon 51 of 78) exon (NM_003922, exon 51 of 78) -53375 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr13-2140 chr13 102554028 102554238 + 9.31 0.000 Intergenic Intergenic -42853 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr2-10187 chr2 96538083 96538293 + 9.31 0.000 5' UTR (NM_001319092, exon 1 of 7) 5' UTR (NM_001319092, exon 1 of 7) 309 NM_001319092 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr5-2633 chr5 172943192 172943402 + 9.31 0.000 intron (NM_001031711, intron 9 of 9) intron (NM_001031711, intron 9 of 9) -15432 NM_001317981 51121 Hs.546390 NM_016093 ENSG00000037241 RPL26L1 RPL26P1 ribosomal protein L26 like 1 protein-coding chr6-4522 chr6 38388307 38388517 + 9.31 0.000 intron (NM_052893, intron 7 of 11) intron (NM_052893, intron 7 of 11) -93184 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr12-8228 chr12 124134346 124134556 + 9.31 0.000 intron (NM_001347902, intron 2 of 4) AluJr|SINE|Alu -154713 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr19-6780 chr19 40932900 40933110 + 9.31 0.000 intron (NR_001278, intron 1 of 8) Charlie4z|DNA|hAT-Charlie 8740 NR_001278 1556 Hs.529117 NR_001278 ENSG00000256612 CYP2B7P CYP2B|CYP2B7|CYP2B7P1 cytochrome P450 family 2 subfamily B member 7, pseudogene pseudo chr6-1688 chr6 13710636 13710846 + 9.31 0.000 intron (NM_005493, intron 1 of 13) intron (NM_005493, intron 1 of 13) 1094 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr6-3556 chr6 48825623 48825833 + 9.31 0.000 Intergenic L1MB8|LINE|L1 637525 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr4-3783 chr4 99996636 99996846 + 9.31 0.000 intron (NR_125923, intron 1 of 3) MLT1B|LTR|ERVL-MaLR 46247 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chr11-9781 chr11 69708355 69708565 + 9.31 0.000 Intergenic AluSx|SINE|Alu -4438 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr5-5718 chr5 168163742 168163952 + 9.31 0.000 intron (NM_001368145, intron 12 of 26) PABL_A|LTR|ERV1 -1998 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr15-2368 chr15 41907602 41907812 + 9.31 0.000 intron (NM_139265, intron 5 of 5) AluJb|SINE|Alu -13654 NM_016642 51332 Hs.709819 NM_016642 ENSG00000137877 SPTBN5 BSPECV|HUBSPECV|HUSPECV spectrin beta, non-erythrocytic 5 protein-coding chr10-5686 chr10 99709477 99709687 + 9.31 0.000 3' UTR (NM_001349963, exon 13 of 13) 3' UTR (NM_001349963, exon 13 of 13) -22652 NM_015960 51076 Hs.16606 NM_015960 ENSG00000119929 CUTC CGI-32 cutC copper transporter protein-coding chr3-6268 chr3 71111853 71112063 + 9.31 0.000 intron (NR_146142, intron 7 of 19) MER20|DNA|hAT-Charlie 18628 NM_001244815 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr8-1528 chr8 91363852 91364062 + 9.31 0.000 intron (NM_134266, intron 13 of 18) (T)n|Simple_repeat|Simple_repeat 114638 NM_134266 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chr2-3808 chr2 23828300 23828510 + 9.31 0.000 intron (NR_125717, intron 15 of 28) intron (NR_125717, intron 15 of 28) 98718 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr1-5018 chr1 74255806 74256016 + 9.31 0.000 intron (NM_015978, intron 4 of 24) L1ME1|LINE|L1 20524 NM_015978 51086 Hs.480085 NM_015978 ENSG00000116783 TNNI3K CARK|CCDD TNNI3 interacting kinase protein-coding chr18-2235 chr18 69234583 69234793 + 9.31 0.000 Intergenic Intergenic -166200 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr7-6221 chr7 131498039 131498249 + 9.31 0.000 Intergenic Intergenic 58484 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr13-1559 chr13 32470932 32471142 + 9.31 0.000 intron (NM_001320836, intron 6 of 9) HERVL18-int|LTR|ERVL 27455 NR_051980 100462953 Hs.687692 NR_051980 MICOS10P1 CG012|MINOS1P1|N4BP2L2-IT|N4BP2L2-IT1|N4BP2L2IT1 MICOS10 pseudogene 1 pseudo chr6-3169 chr6 119978227 119978437 + 9.31 0.000 Intergenic Intergenic -36847 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr16-3729 chr16 6805535 6805745 + 9.31 0.000 intron (NM_001142334, intron 1 of 13) intron (NM_001142334, intron 1 of 13) 31831 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr20-3342 chr20 25673053 25673263 + 9.31 0.000 TTS (NM_001290261) TTS (NM_001290261) 13781 NM_001290261 26152 Hs.61881 NM_015655 ENSG00000130684 ZNF337 - zinc finger protein 337 protein-coding chr12-3786 chr12 54364311 54364521 + 9.31 0.000 promoter-TSS (NM_020370) promoter-TSS (NM_020370) 70 NM_020370 53831 Hs.306199 NM_020370 ENSG00000139572 GPR84 EX33|GPCR4 G protein-coupled receptor 84 protein-coding chr16-4585 chr16 67599429 67599639 + 9.31 0.000 intron (NM_001191022, intron 2 of 9) intron (NM_001191022, intron 2 of 9) 28761 NM_001363916 10664 Hs.368367 NM_006565 ENSG00000102974 CTCF MRD21 CCCTC-binding factor protein-coding chr12-2375 chr12 24500941 24501151 + 9.31 0.000 intron (NM_152989, intron 1 of 17) intron (NM_152989, intron 1 of 17) 61445 NM_001261414 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr1-5700 chr1 57682976 57683186 + 9.31 0.000 intron (NM_001353980, intron 3 of 5) L1PA16|LINE|L1 -177500 NR_104362 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr17-4803 chr17 49967002 49967212 + 9.31 0.000 Intergenic Intergenic -2083 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr1-3753 chr1 1527006 1527216 + 9.31 0.000 intron (NM_001170536, intron 13 of 15) intron (NM_001170536, intron 13 of 15) 13513 NM_001114748 339453 Hs.668654 NM_001114748 ENSG00000205090 TMEM240 C1orf70|SCA21 transmembrane protein 240 protein-coding chr19-3354 chr19 10539095 10539305 + 9.31 0.000 Intergenic MIR1_Amn|SINE|MIR -4704 NR_104025 84971 Hs.512799 NM_032885 ENSG00000130734 ATG4D APG4-D|APG4D|AUTL4 autophagy related 4D cysteine peptidase protein-coding chr10-3183 chr10 88893666 88893876 + 9.31 0.000 intron (NM_020799, intron 1 of 10) intron (NM_020799, intron 1 of 10) 13526 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr3-7497 chr3 157423345 157423555 + 9.31 0.000 intron (NM_024621, intron 5 of 13) MER5A|DNA|hAT-Charlie -13400 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr21-968 chr21 45417119 45417329 + 9.31 0.000 intron (NM_130445, intron 2 of 42) intron (NM_130445, intron 2 of 42) -7159 NR_052004 100874236 Hs.589901 NR_052004 ENSG00000224574 COL18A1-AS2 - COL18A1 antisense RNA 2 ncRNA chr15-2944 chr15 48388611 48388821 + 9.31 0.000 Intergenic Intergenic 56519 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr13-1891 chr13 42216090 42216300 + 9.31 0.000 intron (NM_001204506, intron 24 of 27) intron (NM_001204506, intron 24 of 27) -55957 NM_016248 11215 Hs.105105 NM_016248 ENSG00000023516 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A-kinase anchoring protein 11 protein-coding chr4-7125 chr4 36280553 36280763 + 9.31 0.000 promoter-TSS (NR_160267) promoter-TSS (NR_160267) -958 NM_001136536 401124 Hs.363407 NM_001136536 ENSG00000197057 DTHD1 - death domain containing 1 protein-coding chr13-755 chr13 62570589 62570799 + 9.31 0.000 Intergenic MLT2B4|LTR|ERVL 225998 NR_047029 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr7-9303 chr7 127679041 127679251 + 9.31 0.000 intron (NM_014390, intron 1 of 23) intron (NM_014390, intron 1 of 23) 26952 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr1-8444 chr1 100307077 100307287 + 9.31 0.000 Intergenic Intergenic 25941 NR_030279 693138 NR_030279 ENSG00000207750 MIR553 MIRN553|hsa-mir-553 microRNA 553 ncRNA chr12-3309 chr12 79459949 79460159 + 9.31 0.000 Intergenic SATR2|Satellite|Satellite 40797 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr18-730 chr18 46069082 46069292 + 9.31 0.000 intron (NM_024430, intron 1 of 14) intron (NM_024430, intron 1 of 14) 3073 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr1-6488 chr1 22202857 22203067 + 9.31 0.000 Intergenic Intergenic -59865 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr5-4341 chr5 163566148 163566358 + 9.31 0.000 Intergenic Intergenic 60634 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr10-5892 chr10 118108568 118108778 + 9.31 0.000 intron (NR_026940, intron 3 of 3) intron (NR_026940, intron 3 of 3) -61732 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr20-2227 chr20 63191127 63191337 + 9.31 0.000 Intergenic Intergenic 12732 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA chr8-6441 chr8 60762388 60762598 + 9.31 0.000 intron (NM_017780, intron 2 of 37) MIR|SINE|MIR 21234 NM_001316690 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr1-10828 chr1 203630479 203630689 + 9.31 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 2647 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr2-10329 chr2 155583402 155583612 + 9.31 0.000 Intergenic L1PB2|LINE|L1 671424 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr1-9470 chr1 36123788 36123998 + 9.31 0.000 intron (NM_005202, intron 1 of 3) intron (NM_005202, intron 1 of 3) 1329 NM_005202 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr10-8514 chr10 90966215 90966425 + 9.31 0.000 intron (NR_131214, intron 3 of 5) intron (NR_131214, intron 3 of 5) 19020 NR_131214 105378427 NR_131214 XLOC_008559 - uncharacterized LOC105378427 ncRNA chr12-5362 chr12 118993171 118993381 + 9.31 0.000 intron (NM_194286, intron 1 of 12) intron (NM_194286, intron 1 of 12) 11735 NM_194286 84530 Hs.744964 NM_194286 ENSG00000139767 SRRM4 KIAA1853|MU-MB-2.76|nSR100 serine/arginine repetitive matrix 4 protein-coding chr16-4242 chr16 20507128 20507338 + 9.31 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 55712 NM_001308169 123876 Hs.298252 NM_001010845 ENSG00000183747 ACSM2A A-923A4.1|ACSM2 acyl-CoA synthetase medium chain family member 2A protein-coding chr2-3871 chr2 38174623 38174833 + 9.31 0.000 intron (NR_027252, intron 2 of 2) intron (NR_027252, intron 2 of 2) 43623 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr17-4335 chr17 2828543 2828753 + 9.31 0.000 intron (NM_001330058, intron 2 of 24) intron (NM_001330058, intron 2 of 24) 32210 NM_001100398 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr22-2718 chr22 38403965 38404175 + 9.31 0.000 Intergenic Intergenic -5144 NR_002821 400927 Hs.720223 NR_002821 TPTEP2 Z98749.2 TPTE pseudogene 2 pseudo chr6-4835 chr6 83720397 83720607 + 9.31 0.000 intron (NR_136251, intron 1 of 2) intron (NR_136251, intron 1 of 2) 11060 NR_136251 105377879 Hs.736886 NR_136251 LOC105377879 - uncharacterized LOC105377879 ncRNA chr8-3694 chr8 18336324 18336534 + 9.31 0.000 Intergenic L1M3de|LINE|L1 -54853 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr10-7287 chr10 130696851 130697061 + 9.31 0.000 Intergenic LTR16C|LTR|ERVL 265712 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr5-8610 chr5 138778436 138778646 + 9.31 0.000 intron (NM_001323982, intron 2 of 18) L1MC4|LINE|L1 -24617 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr8-4027 chr8 59301055 59301265 + 9.31 0.000 Intergenic Intergenic 181950 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr18-3452 chr18 67794506 67794716 + 9.31 0.000 intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) 20211 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr18-1975 chr18 38811346 38811556 + 9.31 0.000 Intergenic Intergenic 810724 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr14-1667 chr14 54893359 54893569 + 9.31 0.000 intron (NM_001024071, intron 1 of 5) intron (NM_001024071, intron 1 of 5) 9360 NM_001024024 2643 Hs.86724 NM_000161 ENSG00000131979 GCH1 DYT14|DYT5|DYT5a|GCH|GTP-CH-1|GTPCH1|HPABH4B GTP cyclohydrolase 1 protein-coding chr5-3651 chr5 148786609 148786819 + 9.31 0.000 Intergenic Intergenic -39879 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr5-2915 chr5 133350314 133350524 + 9.31 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 77287 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr16-5714 chr16 81887724 81887934 + 9.31 0.000 intron (NM_002661, intron 9 of 32) intron (NM_002661, intron 9 of 32) 108538 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr15-2058 chr15 58378465 58378675 + 9.31 0.000 Intergenic Tigger3d|DNA|TcMar-Tigger -53421 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr6-5648 chr6 76681854 76682064 + 9.31 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -88336 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr11-4678 chr11 63715596 63715806 + 9.31 0.000 intron (NM_201429, intron 2 of 7) intron (NM_201429, intron 2 of 7) 34201 NM_001265589 10313 Hs.743229 NM_006054 ENSG00000133318 RTN3 ASYIP|HAP|NSPL2|NSPLII|RTN3-A1 reticulon 3 protein-coding chr9-7906 chr9 88814541 88814751 + 9.31 0.000 Intergenic Intergenic -68741 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr11-4569 chr11 125603303 125603513 + 9.31 0.000 intron (NM_152713, intron 5 of 17) intron (NM_152713, intron 5 of 17) 10556 NM_001278503 3703 Hs.504237 NM_152713 ENSG00000134910 STT3A ITM1|STT3-A|TMC STT3 oligosaccharyltransferase complex catalytic subunit A protein-coding chr12-8088 chr12 117761100 117761310 + 9.31 0.000 exon (NM_173598, exon 4 of 20) exon (NM_173598, exon 4 of 20) 207785 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr8-4643 chr8 134431357 134431567 + 9.31 0.000 Intergenic Intergenic -166609 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr8-5453 chr8 41666852 41667062 + 9.31 0.000 intron (NM_020475, intron 39 of 41) MIR3|SINE|MIR -1683 NM_020480 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr10-8848 chr10 110825678 110825888 + 9.31 0.000 intron (NM_001134363, intron 12 of 13) MIR|SINE|MIR 45121 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr17-4773 chr17 44750116 44750326 + 9.31 0.000 non-coding (NR_036623, exon 12 of 12) non-coding (NR_036623, exon 12 of 12) -8767 NM_002390 4185 Hs.6088 NM_002390 ENSG00000073670 ADAM11 MDC ADAM metallopeptidase domain 11 protein-coding chr10-8556 chr10 94072774 94072984 + 9.31 0.000 intron (NM_001288989, intron 2 of 32) intron (NM_001288989, intron 2 of 32) -16147 NM_001165979 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr9-4213 chr9 38523437 38523647 + 9.31 0.000 Intergenic Intergenic 21830 NR_047651 100289137 Hs.644630 NR_047651 ENSG00000283486 FAM95C - family with sequence similarity 95 member C ncRNA chr15-2545 chr15 46080043 46080253 + 9.31 0.000 Intergenic Intergenic 374953 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr2-5881 chr2 240738156 240738366 + 9.31 0.000 intron (NM_004321, intron 35 of 46) intron (NM_004321, intron 35 of 46) 46395 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr6-3154 chr6 113764000 113764210 + 9.31 0.000 Intergenic Intergenic -93240 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding chr9-3114 chr9 76393979 76394189 + 9.31 0.000 intron (NM_018339, intron 1 of 3) CpG 342 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr6-3003 chr6 44276235 44276445 + 9.31 0.000 exon (NM_001137560, exon 3 of 3) exon (NM_001137560, exon 3 of 3) 5890 NM_001137560 441151 Hs.632851 NM_001039704 ENSG00000178233 TMEM151B C6orf137|TMEM193|bA444E17.5 transmembrane protein 151B protein-coding chr2-7820 chr2 46274268 46274478 + 9.31 0.000 Intergenic Intergenic -23034 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr5-8013 chr5 87636928 87637138 + 9.31 0.000 Intergenic Intergenic -25009 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr14-4797 chr14 66082666 66082876 + 9.31 0.000 Intergenic MIR|SINE|MIR -403600 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr4-3308 chr4 164746410 164746620 + 9.31 0.000 Intergenic HAL1|LINE|L1 -7616 NM_001352885 100505989 Hs.328236 NM_001352885 ENSG00000248771 SMIM31 LINC01207 small integral membrane protein 31 protein-coding chr14-1625 chr14 103228039 103228249 + 9.31 0.000 Intergenic Intergenic -39116 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr1-12875 chr1 108947399 108947609 + 9.31 0.000 intron (NM_001048210, intron 4 of 11) intron (NM_001048210, intron 4 of 11) 2944 NM_001278202 23155 Hs.658489 NM_015127 ENSG00000121940 CLCC1 MCLC chloride channel CLIC like 1 protein-coding chr9-8040 chr9 95880081 95880291 + 9.31 0.000 intron (NM_020207, intron 1 of 18) intron (NM_020207, intron 1 of 18) 4178 NM_001010895 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chrX-3153 chrX 20816796 20817006 + 9.31 0.000 Intergenic Intergenic -549992 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr1-7494 chr1 113352672 113352882 + 9.31 0.000 Intergenic Intergenic -37738 NM_001142782 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr3-1737 chr3 142063919 142064129 + 9.31 0.000 intron (NM_001178138, intron 3 of 13) AluSz6|SINE|Alu -35398 NM_006286 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr8-2780 chr8 119978912 119979122 + 9.31 0.000 intron (NM_022783, intron 4 of 8) intron (NM_022783, intron 4 of 8) 105295 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr8-7100 chr8 118489941 118490151 + 9.31 0.000 intron (NM_001101676, intron 2 of 4) intron (NM_001101676, intron 2 of 4) -130955 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr21-890 chr21 9779143 9779353 + 9.31 0.000 Intergenic MIRb|SINE|MIR 41813 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr19-4590 chr19 12502086 12502296 + 9.31 0.000 Intergenic LTR52|LTR|ERVL -17375 NM_152601 163051 Hs.631623 NM_152601 ENSG00000242852 ZNF709 - zinc finger protein 709 protein-coding chr5-2558 chr5 178590096 178590306 + 9.31 0.000 5' UTR (NM_173465, exon 1 of 29) 5' UTR (NM_173465, exon 1 of 29) 192 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chrX-2907 chrX 150981050 150981260 + 9.31 0.000 intron (NM_001301231, intron 1 of 4) intron (NM_001301231, intron 1 of 4) 648 NM_001301231 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr2-7261 chr2 231935783 231935993 + 9.31 0.000 Intergenic Intergenic -9492 NM_024409 4880 Hs.247916 NM_024409 ENSG00000163273 NPPC CNP|CNP2 natriuretic peptide C protein-coding chr17-1330 chr17 15684133 15684343 + 9.31 0.000 promoter-TSS (NM_001348121) promoter-TSS (NM_001348121) 73 NM_001348126 10626 Hs.123534 NM_006470 ENSG00000221926 TRIM16 EBBP tripartite motif containing 16 protein-coding chr11-5687 chr11 239827 240037 + 9.31 0.000 intron (NM_002817, intron 2 of 12) CR1_Mam|LINE|CR1 2956 NM_002817 5719 Hs.134688 NM_002817 ENSG00000185627 PSMD13 HSPC027|Rpn9|S11|p40.5 proteasome 26S subunit, non-ATPase 13 protein-coding chr5-1990 chr5 168698873 168699083 + 9.31 0.000 intron (NM_003062, intron 27 of 35) intron (NM_003062, intron 27 of 35) -7949 NR_130737 101927969 Hs.661903 NR_130737 LOC101927969 - uncharacterized LOC101927969 ncRNA chr3-1763 chr3 190003631 190003841 + 9.31 0.000 intron (NM_001134418, intron 1 of 14) intron (NM_001134418, intron 1 of 14) 117161 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr1-12603 chr1 35757133 35757343 + 9.31 0.000 intron (NM_001330490, intron 8 of 24) L2c|LINE|L2 12740 NM_001330490 63967 Hs.175613 NM_022111 ENSG00000092853 CLSPN - claspin protein-coding chr11-8751 chr11 8767796 8768006 + 9.31 0.000 promoter-TSS (NR_120590) promoter-TSS (NR_120590) -877 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chrX-4318 chrX 45011228 45011438 + 9.31 0.000 intron (NM_001291421, intron 5 of 26) intron (NM_001291421, intron 5 of 26) 138158 NM_001291417 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding chr6-2003 chr6 20534203 20534413 + 9.31 0.000 promoter-TSS (NM_017774) promoter-TSS (NM_017774) -149 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr4-8277 chr4 141762119 141762329 + 9.31 0.000 Intergenic Tigger9a|DNA|TcMar-Tigger 125641 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr7-3754 chr7 76047310 76047520 + 9.31 0.000 promoter-TSS (NM_001282403) promoter-TSS (NM_001282403) 585 NM_001317785 51657 Hs.11615 NM_016086 ENSG00000127952 STYXL1 DUSP24|MK-STYX|MKSTYX serine/threonine/tyrosine interacting like 1 protein-coding chrX-2434 chrX 78838785 78838995 + 9.31 0.000 Intergenic L1M1|LINE|L1 62359 NR_036258 100422932 NR_036258 ENSG00000283622 MIR4328 - microRNA 4328 ncRNA chr4-7212 chr4 42135035 42135245 + 9.31 0.000 intron (NM_207406, intron 3 of 5) intron (NM_207406, intron 3 of 5) 17515 NM_001159547 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr19-1926 chr19 3687345 3687555 + 9.31 0.000 intron (NM_001195733, intron 1 of 16) intron (NM_001195733, intron 1 of 16) 13018 NM_012398 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr7-6738 chr7 5495593 5495803 + 9.31 0.000 TTS (NR_030318) TTS (NR_030318) 219 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr4-6495 chr4 154629619 154629829 + 9.31 0.000 Intergenic L2a|LINE|L2 -16916 NM_000509 2266 Hs.727584 NM_000509 ENSG00000171557 FGG - fibrinogen gamma chain protein-coding chr8-6729 chr8 87198479 87198689 + 9.31 0.000 intron (NM_173538, intron 4 of 10) L1M4|LINE|L1 332169 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr12-4277 chr12 121530681 121530891 + 9.31 0.000 intron (NM_001005366, intron 8 of 22) intron (NM_001005366, intron 8 of 22) 49460 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr1-7256 chr1 229080556 229080766 + 9.31 0.000 Intergenic L1MC2|LINE|L1 94140 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr22-3107 chr22 50563135 50563345 + 9.31 0.000 promoter-TSS (NM_001123225) promoter-TSS (NM_001123225) -321 NM_001123225 644186 Hs.535660 NM_001123225 ENSG00000217442 SYCE3 C22orf41|THEG2 synaptonemal complex central element protein 3 protein-coding chr6-6195 chr6 13380845 13381055 + 9.31 0.000 intron (NM_018988, intron 1 of 1) intron (NM_018988, intron 1 of 1) 27187 NM_001242630 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chrX-386 chrX 71254147 71254357 + 9.31 0.000 promoter-TSS (NM_201599) promoter-TSS (NM_201599) -112 NM_201599 9203 Hs.522684 NM_005096 ENSG00000147130 ZMYM3 DXS6673E|MYM|XFIM|ZNF198L2|ZNF261 zinc finger MYM-type containing 3 protein-coding chr17-4260 chr17 59541682 59541892 + 9.31 0.000 Intergenic Intergenic -14930 NR_110813 101927728 Hs.569720 NR_110813 ENSG00000265313 LINC01476 - long intergenic non-protein coding RNA 1476 ncRNA chr1-10375 chr1 155882846 155883056 + 9.31 0.000 3' UTR (NM_152280, exon 4 of 4) 3' UTR (NM_152280, exon 4 of 4) 23384 NM_152280 23208 Hs.32984 NM_152280 ENSG00000132718 SYT11 SYT12|sytXI synaptotagmin 11 protein-coding chr1-4321 chr1 42334344 42334554 + 9.31 0.000 intron (NM_001198851, intron 1 of 14) intron (NM_001198851, intron 1 of 14) 506 NM_001198851 22887 Hs.26023 NM_014947 ENSG00000198815 FOXJ3 - forkhead box J3 protein-coding chr6-4493 chr6 36834963 36835173 + 9.31 0.000 intron (NM_020939, intron 1 of 20) intron (NM_020939, intron 1 of 20) 4376 NM_001314017 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr8-6401 chr8 55889828 55890038 + 9.31 0.000 intron (NM_002350, intron 1 of 12) intron (NM_002350, intron 1 of 12) 10098 NM_001111097 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chrX-1922 chrX 153190528 153190738 + 9.31 0.000 Intergenic ERVL-B4-int|LTR|ERVL 11349 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chr3-5122 chr3 51953506 51953716 + 9.31 0.000 Intergenic LTR33A|LTR|ERVL -1770 NM_080865 118442 Hs.232213 NM_080865 ENSG00000180929 GPR62 GPCR8|KPG_005 G protein-coupled receptor 62 protein-coding chr9-3670 chr9 97627635 97627845 + 9.31 0.000 intron (NM_139246, intron 1 of 9) intron (NM_139246, intron 1 of 9) 5628 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr4-8399 chr4 151864983 151865193 + 9.31 0.000 Intergenic X6B_LINE|LINE|CR1 -104065 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr6-6999 chr6 21164878 21165088 + 9.31 0.000 intron (NM_017774, intron 13 of 15) intron (NM_017774, intron 13 of 15) 346909 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr1-13131 chr1 200867098 200867308 + 9.31 0.000 Intergenic Intergenic -5778 NM_005298 2848 Hs.534316 NM_005298 ENSG00000170128 GPR25 - G protein-coupled receptor 25 protein-coding chr4-4923 chr4 123889494 123889704 + 9.31 0.000 intron (NR_027105, intron 4 of 5) intron (NR_027105, intron 4 of 5) 115335 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr16-2535 chr16 11453014 11453224 + 9.31 0.000 intron (NM_001370704, intron 28 of 66) intron (NM_001370704, intron 28 of 66) -12141 NR_110907 101927131 Hs.569654 NR_110907 ENSG00000262999 LOC101927131 - uncharacterized LOC101927131 ncRNA chr1-9602 chr1 45042175 45042385 + 9.31 0.000 intron (NM_020883, intron 6 of 13) L1ME4a|LINE|L1 30026 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr7-4392 chr7 89648204 89648414 + 9.31 0.000 Intergenic Intergenic -471091 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr1-5071 chr1 103180711 103180921 + 9.31 0.000 Intergenic Intergenic -72294 NM_080630 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr14-1872 chr14 79849738 79849948 + 9.31 0.000 intron (NM_138970, intron 5 of 5) intron (NM_138970, intron 5 of 5) -361576 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chr13-4293 chr13 98997437 98997647 + 9.31 0.000 intron (NM_015296, intron 1 of 55) intron (NM_015296, intron 1 of 55) 18243 NM_001366678 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr11-10413 chr11 115185925 115186135 + 9.31 0.000 intron (NM_001098517, intron 7 of 8) intron (NM_001098517, intron 7 of 8) -147547 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr12-3054 chr12 5554742 5554952 + 9.31 0.000 Intergenic Intergenic 60715 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr9-3550 chr9 38230238 38230448 + 9.31 0.000 Intergenic Intergenic -161116 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr7-5877 chr7 92766763 92766973 + 9.31 0.000 intron (NM_001259, intron 3 of 7) intron (NM_001259, intron 3 of 7) 67091 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr2-14320 chr2 217744278 217744488 + 9.31 0.000 intron (NR_026597, intron 1 of 12) MIRc|SINE|MIR 12210 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr3-9140 chr3 31927304 31927514 + 9.31 0.000 intron (NM_001174060, intron 1 of 10) intron (NM_001174060, intron 1 of 10) -54341 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr1-15295 chr1 116801322 116801532 + 9.31 0.000 Intergenic Intergenic 46997 NM_001328609 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding chr15-2459 chr15 80732215 80732425 + 9.31 0.000 intron (NM_021214, intron 1 of 2) intron (NM_021214, intron 1 of 2) 37010 NM_021214 58489 Hs.459072 NM_021214 ENSG00000136379 ABHD17C FAM108C1 abhydrolase domain containing 17C protein-coding chr1-8022 chr1 227255195 227255405 + 9.31 0.000 intron (NM_001366019, intron 1 of 36) intron (NM_001366019, intron 1 of 36) 63192 NM_001366010 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr16-2195 chr16 75758331 75758541 + 9.31 0.000 Intergenic Intergenic -31946 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr22-2507 chr22 23008615 23008825 + 9.31 0.000 Intergenic L2a|LINE|L2 -61799 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr10-3028 chr10 111767121 111767331 + 9.31 0.000 Intergenic MER89-int|LTR|ERV1 416539 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr22-1690 chr22 46406702 46406912 + 9.31 0.000 intron (NM_014246, intron 9 of 34) MIR3|SINE|MIR 71093 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr12-4472 chr12 16058824 16059034 + 9.31 0.000 Intergenic Intergenic 147597 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr3-1387 chr3 71725566 71725776 + 9.31 0.000 promoter-TSS (NM_001134651) promoter-TSS (NM_001134651) -269 NM_001134651 317649 Hs.581355 NM_173359 ENSG00000163412 EIF4E3 eIF-4E3|eIF4E-3 eukaryotic translation initiation factor 4E family member 3 protein-coding chr3-3015 chr3 107690735 107690945 + 9.31 0.000 intron (NM_001276286, intron 3 of 16) intron (NM_001276286, intron 3 of 16) 167878 NM_001142568 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr22-1739 chr22 21960180 21960390 + 9.31 0.000 intron (NR_146277, intron 15 of 17) intron (NR_146277, intron 15 of 17) -7437 NM_014634 9647 Hs.112728 NM_014634 ENSG00000100034 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F protein-coding chr19-3138 chr19 19117251 19117461 + 9.31 0.000 Intergenic MER20|DNA|hAT-Charlie 21122 NM_017814 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr10-7342 chr10 711143 711353 + 9.31 0.000 Intergenic Intergenic -21580 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr7-2609 chr7 151454399 151454609 + 9.31 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -13691 NR_131779 155051 Hs.647104 NM_144727 ENSG00000127377 CRYGN - crystallin gamma N protein-coding chr17-2752 chr17 80853916 80854126 + 9.31 0.000 intron (NM_020761, intron 11 of 33) intron (NM_020761, intron 11 of 33) -48389 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr13-4366 chr13 107080026 107080236 + 9.31 0.000 Intergenic Intergenic 240832 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chr2-3142 chr2 182588039 182588249 + 9.31 0.000 Intergenic Intergenic -65299 NM_001003683 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr10-2453 chr10 15262072 15262282 + 9.31 0.000 intron (NM_001010924, intron 3 of 7) intron (NM_001010924, intron 3 of 7) -93484 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr10-9101 chr10 126684959 126685169 + 9.31 0.000 Intergenic Intergenic -14554 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr8-4156 chr8 77391079 77391289 + 9.31 0.000 Intergenic Tigger4a|DNA|TcMar-Tigger -59513 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr4-5816 chr4 95190495 95190705 + 9.31 0.000 intron (NM_003728, intron 12 of 15) FLAM_C|SINE|Alu 99109 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr12-2245 chr12 68342264 68342474 + 9.31 0.000 Intergenic Intergenic -9955 NM_001354972 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr4-2761 chr4 13933264 13933474 + 9.31 0.000 Intergenic LTR1A1|LTR|ERV1 -178599 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr11-6030 chr11 26427721 26427931 + 9.31 0.000 intron (NM_031418, intron 1 of 26) THE1C|LTR|ERVL-MaLR -46076 NM_001313727 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chrX-4895 chrX 107356697 107356907 + 9.31 0.000 Intergenic Intergenic 150170 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr11-9638 chr11 66416584 66416794 + 9.31 0.000 Intergenic Intergenic -4315 NM_001318804 266743 Hs.256036 NM_178864 ENSG00000174576 NPAS4 Le-PAS|NXF|PASD10|bHLHe79 neuronal PAS domain protein 4 protein-coding chr10-2335 chr10 69413359 69413569 + 9.31 0.000 intron (NM_001057, intron 2 of 4) intron (NM_001057, intron 2 of 4) 3454 NM_001057 6865 Hs.88372 NM_001057 ENSG00000075073 TACR2 NK2R|NKNAR|SKR|TAC2R tachykinin receptor 2 protein-coding chr15-3777 chr15 67456984 67457194 + 9.31 0.000 intron (NR_040052, intron 3 of 5) intron (NR_040052, intron 3 of 5) 63884 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr18-1996 chr18 40955998 40956208 + 9.31 0.000 Intergenic X6B_LINE|LINE|CR1 564574 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr20-3540 chr20 1280745 1280955 + 9.31 0.000 intron (NM_014723, intron 2 of 5) intron (NM_014723, intron 2 of 5) 14556 NM_014723 9751 Hs.323833 NM_014723 ENSG00000101298 SNPH - syntaphilin protein-coding chr11-4636 chr11 27820367 27820577 + 9.31 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -98442 NM_170731 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr17-2660 chr17 28916603 28916813 + 9.31 0.000 intron (NM_001033561, intron 7 of 14) intron (NM_001033561, intron 7 of 14) -9567 NR_110803 101927018 Hs.665702 NR_110803 ENSG00000265845 LOC101927018 - uncharacterized LOC101927018 ncRNA chr5-1507 chr5 139273881 139274091 + 9.31 0.000 non-coding (NR_003141, exon 1 of 4) non-coding (NR_003141, exon 1 of 4) 234 NR_036536 724102 Hs.268939 NR_003141 SNHG4 NCRNA00059|U19H small nucleolar RNA host gene 4 ncRNA chr11-7527 chr11 11097016 11097226 + 9.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR 238904 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr5-3188 chr5 76659960 76660170 + 9.31 0.000 intron (NM_006633, intron 21 of 35) intron (NM_006633, intron 21 of 35) -36662 NM_001256566 2151 Hs.42502 NM_004101 ENSG00000164220 F2RL2 PAR-3|PAR3 coagulation factor II thrombin receptor like 2 protein-coding chr11-3476 chr11 78208376 78208586 + 9.31 0.000 intron (NM_020798, intron 8 of 10) intron (NM_020798, intron 8 of 10) 19562 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr3-2677 chr3 48207126 48207336 + 9.31 0.000 Intergenic Intergenic 10667 NR_039645 100616407 NR_039645 ENSG00000265483 MIR4443 mir-4443 microRNA 4443 ncRNA chr12-6180 chr12 14059612 14059822 + 9.31 0.000 Intergenic Intergenic -79361 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr7-6081 chr7 116242939 116243149 + 9.31 0.000 intron (NM_015641, intron 2 of 6) L1MEd|LINE|L1 20091 NM_152829 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr8-3902 chr8 40030903 40031113 + 9.31 0.000 Intergenic AluSg7|SINE|Alu 96053 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr2-2004 chr2 63875263 63875473 + 9.31 0.000 intron (NM_001001521, intron 3 of 9) intron (NM_001001521, intron 3 of 9) 33488 NM_006759 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr14-1824 chr14 51159809 51160019 + 9.31 0.000 Intergenic MER65-int|LTR|ERV1 -64210 NM_052978 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr7-2748 chr7 45178292 45178502 + 9.31 0.000 intron (NM_005856, intron 2 of 2) intron (NM_005856, intron 2 of 2) 20606 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr4-2426 chr4 127886788 127886998 + 9.31 0.000 intron (NM_014264, intron 5 of 15) intron (NM_014264, intron 5 of 15) 5649 NM_001190801 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding chr4-1542 chr4 168769650 168769860 + 9.31 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -62340 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr2-13547 chr2 152738337 152738547 + 9.31 0.000 intron (NR_146431, intron 3 of 3) THE1B-int|LTR|ERVL-MaLR 19805 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr2-5966 chr2 52830698 52830908 + 9.31 0.000 Intergenic L2c|LINE|L2 -128188 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr7-8757 chr7 78101083 78101293 + 9.31 0.000 intron (NM_001301128, intron 19 of 20) L1MA9|LINE|L1 -246054 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr2-13861 chr2 178132242 178132452 + 9.31 0.000 Intergenic Intergenic 19910 NM_001365578 129831 Hs.377257 NM_152945 ENSG00000155636 RBM45 DRB1|RB-1 RNA binding motif protein 45 protein-coding chr2-5095 chr2 12321335 12321545 + 9.31 0.000 intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) 122310 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr14-2704 chr14 87076997 87077207 + 9.31 0.000 Intergenic Intergenic 171324 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr5-7614 chr5 44757023 44757233 + 9.31 0.000 intron (NR_109865, intron 1 of 2) L1PA4|LINE|L1 51665 NR_109862 100506674 Hs.575213 NR_109862 MRPS30-DT BRCAT54 MRPS30 divergent transcript ncRNA chr20-1393 chr20 3748288 3748498 + 9.31 0.000 intron (NM_052970, intron 8 of 12) intron (NM_052970, intron 8 of 12) 15708 NM_001197327 116835 Hs.516854 NM_052970 ENSG00000132622 HSPA12B C20orf60 heat shock protein family A (Hsp70) member 12B protein-coding chr12-2857 chr12 6213824 6214034 + 9.31 0.000 intron (NM_001769, intron 1 of 7) intron (NM_001769, intron 1 of 7) 13529 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr1-12644 chr1 42729778 42729988 + 9.31 0.000 Intergenic L1MC4|LINE|L1 10353 NM_148960 149461 Hs.496270 NM_148960 ENSG00000164007 CLDN19 HOMG5 claudin 19 protein-coding chr9-1349 chr9 130958690 130958900 + 9.31 0.000 Intergenic (CACCAC)n|Simple_repeat|Simple_repeat -19548 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr3-7572 chr3 3367767 3367977 + 9.31 0.000 Intergenic Intergenic -188155 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr20-2788 chr20 55641428 55641638 + 9.31 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -214336 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA chr3-4360 chr3 185426822 185427032 + 9.31 0.000 intron (NM_004721, intron 1 of 13) intron (NM_004721, intron 1 of 13) 63791 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr9-2589 chr9 137167377 137167587 + 9.31 0.000 exon (NM_007327, exon 20 of 20) exon (NM_007327, exon 20 of 20) 1788 NR_037416 100500811 NR_037416 ENSG00000263697 MIR3621 - microRNA 3621 ncRNA chr15-2059 chr15 59124104 59124314 + 9.31 0.000 intron (NM_004701, intron 8 of 8) intron (NM_004701, intron 8 of 8) 19063 NM_004701 9133 Hs.194698 NM_004701 ENSG00000157456 CCNB2 HsT17299 cyclin B2 protein-coding chr17-3820 chr17 42124606 42124816 + 9.31 0.000 TTS (NM_001252039) TTS (NM_001252039) 1907 NM_033194 94086 Hs.620611 NM_033194 ENSG00000260325 HSPB9 CT51 heat shock protein family B (small) member 9 protein-coding chr5-3518 chr5 159564 159774 + 9.31 0.000 intron (NM_052909, intron 11 of 19) intron (NM_052909, intron 11 of 19) -31826 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr6-7200 chr6 39206724 39206934 + 9.31 0.000 intron (NM_003740, intron 1 of 4) MIRb|SINE|MIR 22646 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding chr2-7580 chr2 25249748 25249958 + 9.31 0.000 intron (NM_153759, intron 1 of 18) intron (NM_153759, intron 1 of 18) 2278 NM_001320893 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr17-2362 chr17 71494193 71494403 + 9.31 0.000 Intergenic Intergenic -292119 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr13-394 chr13 48001292 48001502 + 9.31 0.000 promoter-TSS (NM_003850) promoter-TSS (NM_003850) -71 NM_003850 8803 Hs.743361 NM_003850 ENSG00000136143 SUCLA2 A-BETA|A-SCS|MTDPS5|SCS-betaA succinate-CoA ligase ADP-forming beta subunit protein-coding chr14-1325 chr14 72666641 72666851 + 9.31 0.000 intron (NM_001280544, intron 9 of 9) intron (NM_001280544, intron 9 of 9) 149926 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr6-6491 chr6 115582330 115582540 + 9.31 0.000 Intergenic Intergenic 61400 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr4-8603 chr4 170693732 170693942 + 9.31 0.000 Intergenic Intergenic 49898 NR_134683 100506107 Hs.380602 NR_134683 ENSG00000250968 LINC02382 - long intergenic non-protein coding RNA 2382 ncRNA chr7-5194 chr7 10950808 10951018 + 9.31 0.000 Intergenic ERVL-E-int|LTR|ERVL -10760 NM_002489 4697 Hs.50098 NM_002489 ENSG00000189043 NDUFA4 CI-9k|CI-MLRQ|COXFA4|MLRQ NDUFA4 mitochondrial complex associated protein-coding chr1-8331 chr1 53391905 53392115 + 9.31 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 48010 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr6-7737 chr6 90809236 90809446 + 9.31 0.000 Intergenic Intergenic -222269 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr4-6145 chr4 29915001 29915211 + 9.31 0.000 Intergenic MER51C|LTR|ERV1 700814 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr17-5479 chr17 40676209 40676419 + 9.31 0.000 Intergenic L1MB5|LINE|L1 -11137 NM_152349 125113 Hs.6920 NM_152349 ENSG00000213424 KRT222 KA21|KRT222P keratin 222 protein-coding chr4-4968 chr4 131015197 131015407 + 9.31 0.000 Intergenic MER51B|LTR|ERV1 638941 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr20-2134 chr20 36024356 36024566 + 9.31 0.000 intron (NM_001365709, intron 11 of 11) AluSx1|SINE|Alu 26499 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr14-3850 chr14 76541273 76541483 + 9.31 0.000 Intergenic MER113B|DNA|hAT-Charlie 170031 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr2-11158 chr2 147588635 147588845 + 9.31 0.000 Intergenic Intergenic -255777 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr13-3245 chr13 31922724 31922934 + 9.31 0.000 intron (NR_027062, intron 1 of 3) L2|LINE|L2 76046 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr15-2051 chr15 56496659 56496869 + 9.31 0.000 Intergenic Intergenic -31627 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr14-740 chr14 49635091 49635301 + 9.31 0.000 promoter-TSS (NM_018139) promoter-TSS (NM_018139) 34 NM_018139 55172 Hs.231761 NM_018139 ENSG00000165506 DNAAF2 C14orf104|CILD10|KTU|PF13 dynein axonemal assembly factor 2 protein-coding chr7-4030 chr7 153391149 153391359 + 9.31 0.000 Intergenic MER50-int|LTR|ERV1 20980 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr20-1517 chr20 37715042 37715252 + 9.31 0.000 intron (NM_030877, intron 1 of 15) intron (NM_030877, intron 1 of 15) 21117 NM_030877 56259 Hs.472667 NM_030877 ENSG00000132792 CTNNBL1 C20orf33|NAP|P14L|PP8304|dJ633O20.1 catenin beta like 1 protein-coding chr22-1566 chr22 42771491 42771701 + 9.31 0.000 Intergenic Intergenic -50295 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr3-3269 chr3 76673114 76673324 + 9.31 0.000 Intergenic Intergenic -366880 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr17-2489 chr17 77810611 77810821 + 9.31 0.000 Intergenic Intergenic 73371 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr11-6052 chr11 30530138 30530348 + 9.31 0.000 intron (NM_001584, intron 2 of 5) intron (NM_001584, intron 2 of 5) 50250 NM_001584 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chrX-1238 chrX 93214418 93214628 + 9.31 0.000 Intergenic MIRc|SINE|MIR -389620 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr3-5235 chr3 99319921 99320131 + 9.31 0.000 Intergenic L3|LINE|CR1 -318568 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr8-1712 chr8 125008747 125008957 + 9.31 0.000 intron (NM_003129, intron 4 of 10) intron (NM_003129, intron 4 of 10) 10347 NM_003129 6713 Hs.71465 NM_003129 ENSG00000104549 SQLE - squalene epoxidase protein-coding chr5-3149 chr5 66958042 66958252 + 9.31 0.000 promoter-TSS (NM_001290226) promoter-TSS (NM_001290226) -926 NM_001290226 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr12-3815 chr12 69241449 69241659 + 9.31 0.000 intron (NM_007007, intron 1 of 9) intron (NM_007007, intron 1 of 9) 1985 NM_007007 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr14-5108 chr14 88888847 88889057 + 9.31 0.000 Intergenic Intergenic 64301 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr12-2369 chr12 19223797 19224007 + 9.31 0.000 intron (NM_001256787, intron 1 of 25) LTR82B|LTR|ERVL 18577 NM_001256787 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr6-2500 chr6 125730039 125730249 + 9.31 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -19488 NM_012259 23493 Hs.144287 NM_012259 ENSG00000135547 HEY2 CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32 hes related family bHLH transcription factor with YRPW motif 2 protein-coding chr1-11514 chr1 156078277 156078487 + 9.31 0.000 intron (NM_001093725, intron 1 of 1) intron (NM_001093725, intron 1 of 1) 4083 NM_001093725 92312 Hs.591496 NM_001093725 ENSG00000254726 MEX3A MEX-3A|RKHD4|RNF162 mex-3 RNA binding family member A protein-coding chr9-8431 chr9 121508259 121508469 + 9.31 0.000 Intergenic Intergenic -8337 NR_003191 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr13-4408 chr13 110238489 110238699 + 9.31 0.000 intron (NM_001845, intron 2 of 51) intron (NM_001845, intron 2 of 51) 68563 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr2-5025 chr2 231723301 231723511 + 9.31 0.000 Intergenic L4_A_Mam|LINE|RTE-X 10092 NR_036052 100302285 NR_036052 ENSG00000284378 MIR1244-1 MIR1244|MIRN1244|hsa-mir-1244|hsa-mir-1244-1 microRNA 1244-1 ncRNA chr17-5253 chr17 18026530 18026740 + 9.31 0.000 intron (NM_145691, intron 3 of 7) intron (NM_145691, intron 3 of 7) 12533 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr1-10297 chr1 150521620 150521830 + 9.31 0.000 Intergenic L1ME3B|LINE|L1 5968 NR_051960 100874054 Hs.576460 NR_051960 ENSG00000228126 FALEC FAL1|LINC00568|ncRNA-a1 focally amplified long non-coding RNA in epithelial cancer ncRNA chr5-8972 chr5 161120505 161120715 + 9.31 0.000 Intergenic L2c|LINE|L2 -181984 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr2-4611 chr2 133326879 133327089 + 9.31 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 60789 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr3-7789 chr3 81581418 81581628 + 9.31 0.000 intron (NM_000158, intron 10 of 15) intron (NM_000158, intron 10 of 15) 180122 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr1-12798 chr1 82995707 82995917 + 9.31 0.000 intron (NR_147074, intron 3 of 10) intron (NR_147074, intron 3 of 10) -9604 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chr11-9415 chr11 58530042 58530252 + 9.31 0.000 intron (NM_001307951, intron 6 of 7) L1PA7|LINE|L1 -22042 NM_001005218 219968 Hs.553647 NM_001005218 ENSG00000198283 OR5B21 - olfactory receptor family 5 subfamily B member 21 protein-coding chr1-8924 chr1 7248656 7248866 + 9.31 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 140993 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr11-4542 chr11 120211830 120212040 + 9.31 0.000 intron (NM_178507, intron 1 of 3) MIR3|SINE|MIR 903 NM_178507 220323 Hs.445081 NM_178507 ENSG00000184232 OAF NS5ATP13TP2 out at first homolog protein-coding chr2-11248 chr2 171701876 171702086 + 9.31 0.000 intron (NM_001271788, intron 3 of 15) intron (NM_001271788, intron 3 of 15) 14226 NM_001271785 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr3-3151 chr3 169071297 169071507 + 9.31 0.000 Intergenic Intergenic 74121 NM_001366472 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr11-8793 chr11 10759054 10759264 + 9.31 0.000 intron (NM_014633, intron 5 of 24) L2-3_Crp|LINE|L2 7913 NM_001346279 9646 Hs.725151 NM_014633 ENSG00000198730 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding chr5-4878 chr5 66398018 66398228 + 9.31 0.000 Intergenic LTR81A|LTR|Gypsy 113481 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr2-13440 chr2 143544557 143544767 + 9.31 0.000 intron (NM_018460, intron 10 of 13) L2a|LINE|L2 -392405 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr4-2090 chr4 38429819 38430029 + 9.31 0.000 intron (NR_110951, intron 7 of 7) intron (NR_110951, intron 7 of 7) 63010 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr6-1971 chr6 151446433 151446643 + 9.31 0.000 intron (NM_017909, intron 1 of 11) intron (NM_017909, intron 1 of 11) 5588 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr11-4508 chr11 116631207 116631417 + 9.31 0.000 Intergenic L2a|LINE|L2 -8110 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr8-2929 chr8 17450958 17451168 + 9.31 0.000 Intergenic Intergenic -37712 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr14-2398 chr14 54107317 54107527 + 9.31 0.000 Intergenic Intergenic -150531 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr20-3130 chr20 34990480 34990690 + 9.31 0.000 promoter-TSS (NR_039912) promoter-TSS (NR_039912) -113 NR_039912 100616134 NR_039912 ENSG00000283441 MIR499B MIR499A|hsa-mir-499b microRNA 499b ncRNA chr17-3898 chr17 50689394 50689604 + 9.31 0.000 intron (NM_003786, intron 30 of 30) intron (NM_003786, intron 30 of 30) 18415 NM_052855 91369 Hs.463426 NM_052855 ENSG00000154945 ANKRD40 - ankyrin repeat domain 40 protein-coding chr22-4223 chr22 46522585 46522795 + 9.31 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 14930 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr1-5438 chr1 40374091 40374301 + 9.31 0.000 promoter-TSS (NM_001198978) promoter-TSS (NM_001198978) -437 NM_001198978 64744 Hs.15200 NM_022733 ENSG00000084070 SMAP2 SMAP1L small ArfGAP2 protein-coding chr15-5244 chr15 98004275 98004485 + 9.31 0.000 intron (NR_146565, intron 1 of 1) intron (NR_146565, intron 1 of 1) 1342 NR_146564 105371008 NR_146563 LINC02251 - long intergenic non-protein coding RNA 2251 ncRNA chr14-5371 chr14 103463919 103464129 + 9.31 0.000 intron (NM_001128921, intron 7 of 15) L2b|LINE|L2 58806 NM_001823 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr8-3573 chr8 131807028 131807238 + 9.31 0.000 Intergenic L2a|LINE|L2 -96960 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr7-7745 chr7 1034193 1034403 + 9.31 0.000 intron (NM_001134395, intron 2 of 4) L1MC1|LINE|L1 -5866 NR_146966 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr12-5568 chr12 10773150 10773360 + 9.31 0.000 intron (NR_120463, intron 2 of 6) L1MD3|LINE|L1 23021 NR_120463 101928162 Hs.112950 NR_120463 ENSG00000256888 LINC02366 - long intergenic non-protein coding RNA 2366 ncRNA chr14-3771 chr14 53516449 53516659 + 9.31 0.000 Intergenic MIR|SINE|MIR 363200 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr9-4036 chr9 89588084 89588294 + 9.31 0.000 Intergenic L1MEc|LINE|L1 -16823 NM_006705 10912 Hs.9701 NM_006705 ENSG00000130222 GADD45G CR6|DDIT2|GADD45gamma|GRP17 growth arrest and DNA damage inducible gamma protein-coding chr14-2395 chr14 53019462 53019672 + 9.31 0.000 Intergenic MER34-int|LTR|ERV1 -68470 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr6-5719 chr6 141947052 141947262 + 9.31 0.000 Intergenic L2|LINE|L2 141642 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr11-2809 chr11 117561621 117561831 + 9.31 0.000 intron (NM_020693, intron 3 of 32) L2b|LINE|L2 233872 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr7-3293 chr7 34972956 34973166 + 9.31 0.000 intron (NM_015283, intron 8 of 21) intron (NM_015283, intron 8 of 21) -32227 NR_031666 100302152 NR_031666 ENSG00000221669 MIR548N MIRN548N|hsa-mir-548n microRNA 548n ncRNA chr20-2495 chr20 33297447 33297657 + 9.31 0.000 exon (NM_033197, exon 7 of 16) exon (NM_033197, exon 7 of 16) 14338 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr14-5322 chr14 102050603 102050813 + 9.31 0.000 3' UTR (NM_001376, exon 78 of 78) 3' UTR (NM_001376, exon 78 of 78) 36336 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr22-1508 chr22 42620785 42620995 + 9.31 0.000 intron (NM_007326, intron 8 of 8) L4_A_Mam|LINE|RTE-X 5645 NR_029422 267010 Hs.574857 NR_029422 ENSG00000276027 RNU12 RNU12-1|RNU12L|RNU12P|dJ222E13.7 RNA, U12 small nuclear snRNA chr8-4396 chr8 104892818 104893028 + 9.31 0.000 Intergenic Intergenic -303899 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr4-5795 chr4 80913879 80914089 + 9.31 0.000 intron (NM_152770, intron 4 of 5) L1ME1|LINE|L1 -116724 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr19-4011 chr19 3343492 3343702 + 9.31 0.000 Intergenic L2b|LINE|L2 -16033 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr5-5950 chr5 95113481 95113691 + 9.31 0.000 intron (NM_024717, intron 1 of 22) L1MA3|LINE|L1 -31720 NM_001297777 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr5-2708 chr5 102778653 102778863 + 9.31 0.000 intron (NR_157231, intron 1 of 14) intron (NR_157231, intron 1 of 14) 23453 NM_001364590 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr4-3648 chr4 22130835 22131045 + 9.31 0.000 Intergenic Intergenic -182189 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr2-6113 chr2 210785478 210785688 + 9.31 0.000 Intergenic Intergenic 168012 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr1-14657 chr1 59015755 59015965 + 9.31 0.000 Intergenic Intergenic -4616 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr9-5308 chr9 86096479 86096689 + 9.31 0.000 intron (NM_177937, intron 1 of 9) Charlie7|DNA|hAT-Charlie 2974 NM_016548 51280 Hs.494337 NM_016548 ENSG00000135052 GOLM1 C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 golgi membrane protein 1 protein-coding chr1-5289 chr1 212655416 212655626 + 9.31 0.000 Intergenic Intergenic 31047 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding chr9-5181 chr9 70325029 70325239 + 9.31 0.000 intron (NM_015110, intron 17 of 24) MER21C|LTR|ERVL 66156 NM_015110 23137 Hs.534189 NM_015110 ENSG00000198887 SMC5 SMC5L1 structural maintenance of chromosomes 5 protein-coding chr14-4045 chr14 55062696 55062906 + 9.31 0.000 exon (NM_144578, exon 3 of 4) exon (NM_144578, exon 3 of 4) 11154 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding chr20-3176 chr20 44324782 44324992 + 9.31 0.000 Intergenic Intergenic -12271 NM_178491 140902 Hs.580807 NM_178491 ENSG00000101074 R3HDML dJ881L22.3 R3H domain containing like protein-coding chr6-3979 chr6 109260152 109260362 + 9.31 0.000 intron (NR_152435, intron 19 of 45) intron (NR_152435, intron 19 of 45) 94426 NR_152435 221262 Hs.373914 NM_173671 ENSG00000203799 CCDC162P C6orf183|C6orf184|C6orf185|CCDC162 coiled-coil domain containing 162, pseudogene pseudo chr7-2317 chr7 101713645 101713855 + 9.31 0.000 Intergenic Intergenic -84454 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr22-1864 chr22 39753300 39753510 + 9.31 0.000 intron (NM_152512, intron 6 of 6) intron (NM_152512, intron 6 of 6) 140355 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr2-3564 chr2 33484560 33484770 + 9.31 0.000 intron (NM_001349975, intron 3 of 19) intron (NM_001349975, intron 3 of 19) 8016 NM_001139488 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding chr12-7595 chr12 78088716 78088926 + 9.31 0.000 intron (NM_001024383, intron 12 of 39) intron (NM_001024383, intron 12 of 39) 257927 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr3-4370 chr3 186187036 186187246 + 9.31 0.000 intron (NM_001346, intron 22 of 24) L2|LINE|L2 -78052 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr11-10621 chr11 125250654 125250864 + 9.31 0.000 intron (NM_022062, intron 2 of 12) intron (NM_022062, intron 2 of 12) 86008 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chrX-4780 chrX 97435264 97435474 + 9.31 0.000 intron (NM_006729, intron 26 of 26) L2a|LINE|L2 129166 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr13-1438 chr13 51315394 51315604 + 9.31 0.000 Intergenic Intergenic -25533 NM_001101320 647174 Hs.685891 NM_001101320 ENSG00000253309 SERPINE3 - serpin family E member 3 protein-coding chr16-5331 chr16 79687927 79688137 + 9.31 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -82439 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr2-6658 chr2 9138937 9139147 + 9.31 0.000 Intergenic Intergenic -67723 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr5-7889 chr5 75118305 75118515 + 9.31 0.000 intron (NM_001164443, intron 16 of 24) intron (NM_001164443, intron 16 of 24) -65852 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding chrX-379 chrX 153598681 153598891 + 9.31 0.000 promoter-TSS (NR_131982) promoter-TSS (NR_131982) 353 NM_152274 92002 Hs.496943 NM_152274 ENSG00000262919 CCNQ FAM58A cyclin Q protein-coding chr20-1510 chr20 36316782 36316992 + 9.31 0.000 intron (NM_001365621, intron 1 of 12) intron (NM_001365621, intron 1 of 12) 10548 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr5-8073 chr5 95102584 95102794 + 9.31 0.000 intron (NM_024717, intron 1 of 22) L2c|LINE|L2 -20823 NM_001297777 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr12-3860 chr12 108313429 108313639 + 9.31 0.000 intron (NM_001142344, intron 1 of 2) MIR|SINE|MIR 7128 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr6-6770 chr6 3637015 3637225 + 9.31 0.000 Intergenic Intergenic 114892 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr6-3975 chr6 108592526 108592736 + 9.31 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 31714 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr7-9692 chr7 153682617 153682827 + 9.31 0.000 Intergenic Intergenic -65411 NM_001364499 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr14-2657 chr14 70683888 70684098 + 9.31 0.000 Intergenic Intergenic -14705 NR_125769 103695436 Hs.572296 NR_125769 ENSG00000258689 LINC01269 - long intergenic non-protein coding RNA 1269 ncRNA chr11-5047 chr11 99522975 99523185 + 9.31 0.000 intron (NM_001243271, intron 2 of 20) intron (NM_001243271, intron 2 of 20) -33065 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr22-542 chr22 20149430 20149640 + 9.31 0.000 intron (NM_001365892, intron 5 of 8) intron (NM_001365892, intron 5 of 8) 1520 NM_001365892 388849 Hs.454905 NM_001243537 ENSG00000234409 CCDC188 - coiled-coil domain containing 188 protein-coding chr13-1092 chr13 97328191 97328401 + 9.31 0.000 intron (NM_144778, intron 2 of 8) intron (NM_144778, intron 2 of 8) -105873 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr21-1107 chr21 34965995 34966205 + 9.31 0.000 intron (NM_001754, intron 2 of 8) MIRc|SINE|MIR 73326 NR_026812 80215 Hs.672131 NM_025143 RUNX1-IT1 C21orf96 RUNX1 intronic transcript 1 ncRNA chr11-5770 chr11 4086714 4086924 + 9.31 0.000 exon (NM_001277961, exon 11 of 12) exon (NM_001277961, exon 11 of 12) -7866 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr7-2395 chr7 47419098 47419308 + 9.31 0.000 intron (NM_022748, intron 10 of 30) intron (NM_022748, intron 10 of 30) 45600 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr12-7596 chr12 78184839 78185049 + 9.31 0.000 intron (NM_001024383, intron 30 of 39) intron (NM_001024383, intron 30 of 39) 174802 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr15-3236 chr15 74642729 74642939 + 9.31 0.000 intron (NM_001142443, intron 7 of 9) intron (NM_001142443, intron 7 of 9) 27840 NM_001130028 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr1-5497 chr1 156084945 156085155 + 9.31 0.000 intron (NM_001282625, intron 2 of 12) intron (NM_001282625, intron 2 of 12) 2504 NM_001282625 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr5-5136 chr5 104295279 104295489 + 9.31 0.000 Intergenic Intergenic -732595 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr1-7474 chr1 86194515 86194725 + 9.31 0.000 Intergenic Intergenic -37636 NR_146340 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr13-4092 chr13 77916086 77916296 + 9.31 0.000 intron (NM_003991, intron 1 of 6) intron (NM_003991, intron 1 of 6) 2640 NM_001122659 1910 Hs.82002 NM_000115 ENSG00000136160 EDNRB ABCDS|ET-B|ET-BR|ETB|ETB1|ETBR|ETRB|HSCR|HSCR2|WS4A endothelin receptor type B protein-coding chr2-6527 chr2 202243366 202243576 + 9.31 0.000 Intergenic AluSx1|SINE|Alu -4874 NM_001371392 chr11-9730 chr11 68453261 68453471 + 9.31 0.000 Intergenic L1MA3|LINE|L1 -7386 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr2-11736 chr2 10772158 10772368 + 9.31 0.000 intron (NM_001039362, intron 7 of 13) MIRb|SINE|MIR 40522 NM_005742 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr11-6947 chr11 112230660 112230870 + 9.31 0.000 intron (NM_000317, intron 4 of 5) intron (NM_000317, intron 4 of 5) 4337 NM_000317 5805 Hs.503860 NM_000317 ENSG00000150787 PTS PTPS 6-pyruvoyltetrahydropterin synthase protein-coding chr10-2280 chr10 4372604 4372814 + 9.31 0.000 Intergenic Intergenic -11537 NR_108054 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr17-4921 chr17 75908057 75908267 + 9.31 0.000 Intergenic AluSx|SINE|Alu -3062 NM_032478 64978 Hs.442609 NM_032478 ENSG00000204316 MRPL38 HSPC262|L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding chr15-3709 chr15 46649039 46649249 + 9.31 0.000 Intergenic LTR16B1|LTR|ERVL -534945 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr16-1237 chr16 825515 825725 + 9.31 0.000 Intergenic Intergenic 20177 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr17-2354 chr17 65628463 65628673 + 9.31 0.000 Intergenic Intergenic -66920 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr3-2885 chr3 47962308 47962518 + 9.31 0.000 intron (NM_002375, intron 3 of 18) LTR41C|LTR|ERVL 112858 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr16-2599 chr16 90016470 90016680 + 9.31 0.000 intron (NM_001288708, intron 1 of 4) intron (NM_001288708, intron 1 of 4) 2881 NM_001042610 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr15-4240 chr15 33201006 33201216 + 9.31 0.000 Intergenic Intergenic -6378 NM_001277313 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr4-7192 chr4 41363569 41363779 + 9.31 0.000 intron (NM_001289122, intron 1 of 25) intron (NM_001289122, intron 1 of 25) 2867 NM_001330784 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr17-8607 chr17 80909112 80909322 + 9.31 0.000 intron (NM_020761, intron 21 of 33) intron (NM_020761, intron 21 of 33) 61996 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr2-9450 chr2 234242271 234242481 + 9.31 0.000 Intergenic Intergenic 191674 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr16-3147 chr16 74999858 75000068 + 9.31 0.000 exon (NM_032268, exon 1 of 5) exon (NM_032268, exon 1 of 5) 939 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr1-3498 chr1 150293831 150294041 + 9.31 0.000 promoter-TSS (NM_018997) promoter-TSS (NM_018997) 94 NM_031901 54460 Hs.405880 NM_018997 ENSG00000266472 MRPS21 MDS016|MRP-S21|RPMS21 mitochondrial ribosomal protein S21 protein-coding chr3-8897 chr3 12144252 12144462 + 9.31 0.000 intron (NM_133625, intron 3 of 12) intron (NM_133625, intron 3 of 12) 14555 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr2-12973 chr2 104702423 104702633 + 9.31 0.000 Intergenic Intergenic 55191 NR_038231 284998 Hs.410180 NR_038231 ENSG00000234177 LINC01114 PANCAT long intergenic non-protein coding RNA 1114 ncRNA chr21-1047 chr21 26619189 26619399 + 9.31 0.000 Intergenic Intergenic -46008 NM_052954 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr1-12385 chr1 7464725 7464935 + 9.31 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) -75076 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr16-4511 chr16 58347078 58347288 + 9.31 0.000 Intergenic Intergenic -45288 NM_022770 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr6-3366 chr6 36621636 36621846 + 9.31 0.000 TTS (NR_037491) TTS (NR_037491) 771 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr9-5030 chr9 28157432 28157642 + 9.31 0.000 intron (NM_152570, intron 5 of 6) THE1B-int|LTR|ERVL-MaLR 561768 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr17-4501 chr17 71095162 71095372 + 9.31 0.000 Intergenic L1PA7|LINE|L1 106912 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr12-4120 chr12 65074914 65075124 + 9.31 0.000 intron (NM_007191, intron 3 of 9) intron (NM_007191, intron 3 of 9) 46286 NM_007191 11197 Hs.284122 NM_007191 ENSG00000156076 WIF1 WIF-1 WNT inhibitory factor 1 protein-coding chr17-2905 chr17 42304449 42304659 + 9.31 0.000 exon (NM_003152, exon 12 of 20) exon (NM_003152, exon 12 of 20) 16498 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr7-6304 chr7 140225635 140225845 + 9.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 48479 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr9-5379 chr9 91834738 91834948 + 9.31 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 115385 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr19-4819 chr19 35666788 35666998 + 9.31 0.000 exon (NM_001281443, exon 2 of 9) exon (NM_001281443, exon 2 of 9) 377 NM_001281443 11045 Hs.159309 NM_007000 ENSG00000105668 UPK1A TSPAN21|UP1A|UPIA|UPKA uroplakin 1A protein-coding chr2-13530 chr2 151687666 151687876 + 9.31 0.000 intron (NM_001271208, intron 25 of 182) intron (NM_001271208, intron 25 of 182) 46705 NM_001271208 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr14-1447 chr14 92785798 92786008 + 9.31 0.000 Intergenic LTR25|LTR|ERV1 -8402 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr11-8487 chr11 118947941 118948151 + 9.31 0.000 Intergenic L2b|LINE|L2 -8252 NM_006760 7379 Hs.379613 NM_006760 ENSG00000110375 UPK2 UP2|UPII uroplakin 2 protein-coding chr16-3645 chr16 86216137 86216347 + 9.31 0.000 Intergenic MIR|SINE|MIR 20061 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr11-7394 chr11 82587325 82587535 + 9.31 0.000 Intergenic Intergenic 146434 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chrX-609 chrX 153698674 153698884 + 9.31 0.000 Intergenic Intergenic 9268 NM_001142806 6535 Hs.540696 NM_005629 ENSG00000130821 SLC6A8 CCDS1|CRT|CRTR|CT1|CTR5 solute carrier family 6 member 8 protein-coding chr3-4264 chr3 149333002 149333212 + 9.31 0.000 intron (NM_001184723, intron 1 of 4) intron (NM_001184723, intron 1 of 4) 331 NM_001184723 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr4-1845 chr4 137307907 137308117 + 9.31 0.000 Intergenic Intergenic -95213 NR_149105 105377441 Hs.668386 NR_149105 LINC02511 - long intergenic non-protein coding RNA 2511 ncRNA chr9-6821 chr9 36944833 36945043 + 9.31 0.000 intron (NR_104000, intron 6 of 9) L4_A_Mam|LINE|RTE-X -51407 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr10-6448 chr10 28391093 28391303 + 9.31 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -88134 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr7-5599 chr7 50305749 50305959 + 9.31 0.000 intron (NM_001291846, intron 1 of 4) intron (NM_001291846, intron 1 of 4) 1138 NM_001291846 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr2-9845 chr2 168016661 168016871 + 9.31 0.000 intron (NM_013233, intron 15 of 17) intron (NM_013233, intron 15 of 17) -75622 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr9-8528 chr9 126215818 126216028 + 9.31 0.000 Intergenic L2a|LINE|L2 59992 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr3-4242 chr3 141293745 141293955 + 9.31 0.000 3' UTR (NM_152282, exon 8 of 8) 3' UTR (NM_152282, exon 8 of 8) -30336 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr1-6206 chr1 208244239 208244449 + 9.31 0.000 promoter-TSS (NM_025179) promoter-TSS (NM_025179) 40 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr6-7527 chr6 68261497 68261707 + 9.31 0.000 intron (NR_125854, intron 3 of 3) intron (NR_125854, intron 3 of 3) 68297 NR_125854 101928280 Hs.544560 NR_125854 ENSG00000226497 LINC02549 - long intergenic non-protein coding RNA 2549 ncRNA chr2-9758 chr2 86345202 86345412 + 9.31 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -7224 NM_001164730 65055 Hs.368884 NM_022912 ENSG00000068615 REEP1 C2orf23|HMN5B|SPG31|Yip2a receptor accessory protein 1 protein-coding chr7-5832 chr7 85358119 85358329 + 9.31 0.000 Intergenic Intergenic -62898 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr14-2642 chr14 67722710 67722920 + 9.31 0.000 intron (NM_152443, intron 3 of 8) intron (NM_152443, intron 3 of 8) 20929 NM_152443 145226 Hs.415322 NM_152443 ENSG00000139988 RDH12 LCA13|RP53|SDR7C2 retinol dehydrogenase 12 protein-coding chr2-8781 chr2 165858067 165858277 + 9.31 0.000 intron (NR_045375, intron 3 of 3) intron (NR_045375, intron 3 of 3) 13769 NR_045375 100506124 Hs.709870 NR_045375 LOC100506124 - uncharacterized LOC100506124 ncRNA chr9-5294 chr9 84712120 84712330 + 9.31 0.000 intron (NM_001018064, intron 6 of 17) intron (NM_001018064, intron 6 of 17) 6324 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr9-2226 chr9 137496221 137496431 + 9.31 0.000 intron (NM_001098537, intron 18 of 34) AluSp|SINE|Alu -36992 NM_015537 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr21-468 chr21 42992465 42992675 + 9.31 0.000 intron (NM_004571, intron 1 of 10) MLT1G3|LTR|ERVL-MaLR 18008 NM_004571 5316 Hs.431043 NM_004571 ENSG00000160199 PKNOX1 PREP1|pkonx1c PBX/knotted 1 homeobox 1 protein-coding chr3-9969 chr3 96275342 96275552 + 9.31 0.000 Intergenic L1MA7|LINE|L1 -84517 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chrX-3669 chrX 103785907 103786117 + 9.31 0.000 intron (NM_000533, intron 2 of 6) intron (NM_000533, intron 2 of 6) 9159 NM_001305004 5354 Hs.1787 NM_000533 ENSG00000123560 PLP1 GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2 proteolipid protein 1 protein-coding chr1-15785 chr1 175658103 175658313 + 9.31 0.000 intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 85387 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr2-11446 chr2 225567746 225567956 + 9.31 0.000 intron (NM_001371273, intron 4 of 7) intron (NM_001371273, intron 4 of 7) 166965 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr15-4063 chr15 68430600 68430810 + 9.31 0.000 intron (NM_001004439, intron 1 of 29) intron (NM_001004439, intron 1 of 29) 1458 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr1-3822 chr1 22161386 22161596 + 9.31 0.000 Intergenic Intergenic -18394 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr11-7249 chr11 12352191 12352401 + 9.31 0.000 intron (NM_032867, intron 7 of 8) L2b|LINE|L2 -25275 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chrX-2460 chrX 82377771 82377981 + 9.31 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -1130414 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr3-3371 chr3 46098474 46098684 + 9.31 0.000 Intergenic Intergenic -71096 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr1-10083 chr1 94521786 94521996 + 9.31 0.000 Intergenic Intergenic 19868 NM_001993 2152 Hs.62192 NM_001993 ENSG00000117525 F3 CD142|TF|TFA coagulation factor III, tissue factor protein-coding chr6-4320 chr6 16130051 16130261 + 9.31 0.000 intron (NM_013262, intron 1 of 6) intron (NM_013262, intron 1 of 6) 1070 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr3-6578 chr3 123834881 123835091 + 9.31 0.000 intron (NM_001321309, intron 2 of 32) intron (NM_001321309, intron 2 of 32) 49346 NM_053025 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr6-3732 chr6 5184347 5184557 + 9.31 0.000 intron (NM_001164841, intron 2 of 3) intron (NM_001164841, intron 2 of 3) -36130 NR_037462 100500900 NR_037462 ENSG00000265083 MIR3691 mir-3691 microRNA 3691 ncRNA chr6-4048 chr6 132744939 132745149 + 9.31 0.000 intron (NM_004665, intron 6 of 6) intron (NM_004665, intron 6 of 6) -10279 NM_001291703 55350 Hs.183656 NM_018399 VNN3 HSA238982 vanin 3 protein-coding chr7-3150 chr7 69596849 69597059 + 9.31 0.000 intron (NR_148926, intron 1 of 2) intron (NR_148926, intron 1 of 2) 670 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr13-958 chr13 110831458 110831668 + 9.31 0.000 Intergenic Intergenic 17858 NR_158538 105370362 NR_158538 LOC105370362 - uncharacterized LOC105370362 ncRNA chr4-7092 chr4 32603473 32603683 + 9.31 0.000 Intergenic Intergenic 252540 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr12-4779 chr12 53398318 53398528 + 9.19 0.000 intron (NM_003109, intron 3 of 5) AluSz|SINE|Alu 17779 NM_003109 6667 Hs.620754 NM_003109 ENSG00000185591 SP1 - Sp1 transcription factor protein-coding chr13-1447 chr13 71628112 71628322 + 9.19 0.000 intron (NM_001366712, intron 3 of 11) intron (NM_001366712, intron 3 of 11) 238975 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr3-3641 chr3 122969519 122969729 + 9.19 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) 6510 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chrX-2552 chrX 100361940 100362150 + 9.19 0.000 intron (NM_020766, intron 2 of 4) intron (NM_020766, intron 2 of 4) 48228 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-2197 chr8 141269696 141269906 + 9.19 0.000 Intergenic (GTGTGT)n|Simple_repeat|Simple_repeat -15172 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr9-5736 chr9 126564847 126565057 + 9.19 0.000 Intergenic Intergenic -49491 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr9-5460 chr9 98607176 98607386 + 9.19 0.000 intron (NM_005458, intron 1 of 18) intron (NM_005458, intron 1 of 18) 101654 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr1-10946 chr1 212158522 212158732 + 9.19 0.000 Intergenic AluSz|SINE|Alu 76109 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr6-8548 chr6 161615582 161615792 + 9.19 0.000 intron (NM_004562, intron 7 of 11) intron (NM_004562, intron 7 of 11) 144710 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr16-2167 chr16 66944722 66944932 + 9.19 0.000 3' UTR (NM_001365405, exon 12 of 12) 3' UTR (NM_001365405, exon 12 of 12) 9311 NM_001365406 8824 Hs.282975 NM_003869 ENSG00000172831 CES2 CE-2|CES2A1|PCE-2|iCE carboxylesterase 2 protein-coding chr3-7447 chr3 127484132 127484342 + 9.19 0.000 Intergenic Intergenic 53543 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr9-2028 chr9 136706779 136706989 + 9.19 0.000 Intergenic AluSx1|SINE|Alu -5688 NM_152421 138311 Hs.741305 NM_152421 ENSG00000165716 DIPK1B C9orf136|FAM69B|pp6977 divergent protein kinase domain 1B protein-coding chr9-7304 chr9 10067297 10067507 + 9.19 0.000 intron (NM_002839, intron 3 of 45) intron (NM_002839, intron 3 of 45) 268010 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr2-12132 chr2 37168297 37168507 + 9.19 0.000 intron (NM_001367551, intron 6 of 6) AluSx1|SINE|Alu -11355 NM_002759 5610 Hs.131431 NM_002759 ENSG00000055332 EIF2AK2 EIF2AK1|PKR|PPP1R83|PRKR eukaryotic translation initiation factor 2 alpha kinase 2 protein-coding chr10-6902 chr10 44904668 44904878 + 9.19 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -6543 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr9-8653 chr9 129816003 129816213 + 9.19 0.000 intron (NM_000113, intron 4 of 4) L2a|LINE|L2 8028 NM_000113 1861 Hs.534312 NM_000113 ENSG00000136827 TOR1A DQ2|DYT1 torsin family 1 member A protein-coding chr11-6707 chr11 78989002 78989212 + 9.19 0.000 intron (NM_001098816, intron 6 of 33) intron (NM_001098816, intron 6 of 33) 413002 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr2-7699 chr2 31810622 31810832 + 9.19 0.000 Intergenic Intergenic -6747 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA chr2-13330 chr2 133090867 133091077 + 9.19 0.000 intron (NM_207481, intron 6 of 17) MSTA|LTR|ERVL-MaLR -175223 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr5-4628 chr5 33550128 33550338 + 9.19 0.000 intron (NM_001324512, intron 18 of 21) intron (NM_001324512, intron 18 of 21) 109457 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr3-3299 chr3 150443296 150443506 + 9.19 0.000 intron (NR_130136, intron 3 of 4) intron (NR_130136, intron 3 of 4) 35103 NM_001303264 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr1-9611 chr1 45621880 45622090 + 9.19 0.000 exon (NM_001190182, exon 8 of 13) exon (NM_001190182, exon 8 of 13) 2069 NM_001190182 149483 Hs.18912 NM_152500 ENSG00000159588 CCDC17 - coiled-coil domain containing 17 protein-coding chr1-5491 chr1 154868666 154868876 + 9.19 0.000 promoter-TSS (NM_001365837) promoter-TSS (NM_001365837) -701 NM_001365838 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr9-4908 chr9 8347396 8347606 + 9.19 0.000 intron (NM_130392, intron 24 of 30) L2b|LINE|L2 386445 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr5-2868 chr5 80736614 80736824 + 9.19 0.000 intron (NM_002439, intron 10 of 23) MER68|LTR|ERVL -81736 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr16-5045 chr16 62665600 62665810 + 9.19 0.000 Intergenic Intergenic -629267 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr10-5429 chr10 77576077 77576287 + 9.19 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 61626 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr12-7926 chr12 108698132 108698342 + 9.19 0.000 intron (NM_001105237, intron 2 of 10) intron (NM_001105237, intron 2 of 10) 4761 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr17-5913 chr17 74595747 74595957 + 9.19 0.000 Intergenic HERV16-int|LTR|ERVL -3569 NM_001115152 100131439 Hs.531099 NM_001115152 ENSG00000204345 CD300LD CD300D|CLM-4|CMRF35-A4|CMRF35A4 CD300 molecule like family member d protein-coding chr5-4169 chr5 102903625 102903835 + 9.19 0.000 intron (NR_157231, intron 5 of 14) intron (NR_157231, intron 5 of 14) 37907 NM_000919 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr11-7182 chr11 130278895 130279105 + 9.19 0.000 intron (NR_163265, intron 1 of 7) L1MB8|LINE|L1 35712 NM_014155 29068 Hs.721470 NM_014155 ENSG00000196323 ZBTB44 BTBD15|HSPC063|ZNF851 zinc finger and BTB domain containing 44 protein-coding chr9-4503 chr9 38498737 38498947 + 9.19 0.000 Intergenic Intergenic 46530 NR_047651 100289137 Hs.644630 NR_047651 ENSG00000283486 FAM95C - family with sequence similarity 95 member C ncRNA chr8-4286 chr8 96204161 96204371 + 9.19 0.000 Intergenic Intergenic 31368 NM_006294 7381 Hs.131255 NM_006294 ENSG00000156467 UQCRB MC3DN3|QCR7|QP-C|QPC|UQBC|UQBP|UQCR6|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding chr7-8316 chr7 41428462 41428672 + 9.19 0.000 Intergenic Intergenic -265352 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr1-7828 chr1 64686986 64687196 + 9.19 0.000 intron (NM_020925, intron 26 of 26) intron (NM_020925, intron 26 of 26) -57882 NM_001366165 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr4-4159 chr4 8182892 8183102 + 9.19 0.000 Intergenic Intergenic -16293 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr7-3841 chr7 100410807 100411017 + 9.19 0.000 intron (NM_001258008, intron 8 of 15) L2b|LINE|L2 17791 NM_001258008 55063 Hs.105191 NM_017984 ENSG00000078487 ZCWPW1 ZCW1 zinc finger CW-type and PWWP domain containing 1 protein-coding chr2-4805 chr2 47085404 47085614 + 9.19 0.000 Intergenic Intergenic 69799 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr16-2150 chr16 48211988 48212198 + 9.19 0.000 intron (NM_001370497, intron 10 of 29) intron (NM_001370497, intron 10 of 29) 20178 NM_033151 85320 Hs.652267 NM_032583 ENSG00000121270 ABCC11 EWWD|MRP8|WW ATP binding cassette subfamily C member 11 protein-coding chr11-7768 chr11 82824539 82824749 + 9.19 0.000 3' UTR (NM_001319214, exon 8 of 8) 3' UTR (NM_001319214, exon 8 of 8) 75786 NM_005040 5547 Hs.523936 NM_005040 ENSG00000137509 PRCP HUMPCP|PCP prolylcarboxypeptidase protein-coding chrX-5083 chrX 126142868 126143078 + 9.19 0.000 Intergenic THE1B|LTR|ERVL-MaLR 23316 NM_001013628 340578 Hs.181867 NM_001013628 ENSG00000198354 DCAF12L2 WDR40C DDB1 and CUL4 associated factor 12 like 2 protein-coding chr1-9370 chr1 29929243 29929453 + 9.19 0.000 Intergenic AluSx4|SINE|Alu 108264 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr2-7497 chr2 18626284 18626494 + 9.19 0.000 Intergenic Intergenic -36809 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr9-5429 chr9 96513635 96513845 + 9.19 0.000 TTS (NM_001351568) TTS (NM_001351568) 53091 NM_001351568 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr3-6844 chr3 149195867 149196077 + 9.19 0.000 intron (NM_000096, intron 9 of 18) L1MC5|LINE|L1 25857 NM_000096 1356 Hs.558314 NM_000096 ENSG00000047457 CP CP-2 ceruloplasmin protein-coding chr4-7538 chr4 76388518 76388728 + 9.19 0.000 intron (NM_001042784, intron 3 of 23) L1MA2|LINE|L1 18682 NM_001042784 339965 Hs.529680 NM_178555 ENSG00000163749 CCDC158 - coiled-coil domain containing 158 protein-coding chr1-5067 chr1 99385089 99385299 + 9.19 0.000 Intergenic L1M2|LINE|L1 102610 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr5-5806 chr5 176703438 176703648 + 9.19 0.000 Intergenic Intergenic -39662 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA KI270742.1-1 KI270742.1 11760 11970 + 9.19 0.000 NA NA NA NA chr5-4795 chr5 56962344 56962554 + 9.19 0.000 Intergenic LTR33A_|LTR|ERVL -10319 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr4-8608 chr4 171838590 171838800 + 9.19 0.000 intron (NM_001034845, intron 2 of 12) intron (NM_001034845, intron 2 of 12) -25088 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr3-5292 chr3 124032304 124032514 + 9.19 0.000 Intergenic Intergenic -40239 NR_133917 54763 Hs.567516 NM_017578 ENSG00000065371 ROPN1 CT91|ODF6|RHPNAP1|ROPN1A|ropporin rhophilin associated tail protein 1 protein-coding chr3-5616 chr3 9720945 9721155 + 9.19 0.000 intron (NM_001308388, intron 16 of 19) MIR|SINE|MIR -10679 NM_001319049 7862 Hs.1004 NM_004634 ENSG00000156983 BRPF1 BR140|IDDDFP bromodomain and PHD finger containing 1 protein-coding chr16-3759 chr16 26373770 26373980 + 9.19 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat 348638 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr6-8298 chr6 143692941 143693151 + 9.19 0.000 intron (NM_001100165, intron 1 of 11) MLT1B|LTR|ERVL-MaLR 15081 NM_001100164 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr2-11333 chr2 201389764 201389974 + 9.19 0.000 exon (NM_015049, exon 11 of 16) exon (NM_015049, exon 11 of 16) -32471 NM_139163 130540 Hs.107944 NM_139163 ENSG00000155749 FLACC1 ALS2CR12 flagellum associated containing coiled-coil domains 1 protein-coding chr10-8121 chr10 69703874 69704084 + 9.19 0.000 Intergenic L1ME2|LINE|L1 73732 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr21-1089 chr21 33269812 33270022 + 9.19 0.000 intron (NM_000628, intron 2 of 6) AluY|SINE|Alu 3550 NM_000628 3588 Hs.654593 NM_000628 ENSG00000243646 IL10RB CDW210B|CRF2-4|CRFB4|D21S58|D21S66|IL-10R2 interleukin 10 receptor subunit beta protein-coding chr12-4644 chr12 44837217 44837427 + 9.19 0.000 intron (NM_006159, intron 3 of 20) MER20|DNA|hAT-Charlie 38339 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr7-9497 chr7 137454900 137455110 + 9.19 0.000 intron (NM_001321710, intron 27 of 32) intron (NM_001321710, intron 27 of 32) -111272 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr2-13405 chr2 140683072 140683282 + 9.19 0.000 intron (NM_018557, intron 41 of 90) intron (NM_018557, intron 41 of 90) -96492 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr18-2018 chr18 43631477 43631687 + 9.19 0.000 Intergenic Intergenic -354092 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr2-14230 chr2 210938280 210938490 + 9.19 0.000 Intergenic Intergenic 320814 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr18-1555 chr18 25744692 25744902 + 9.19 0.000 Intergenic L1PA10|LINE|L1 345816 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr2-12898 chr2 99380352 99380562 + 9.19 0.000 intron (NM_015904, intron 12 of 23) L1MC5|LINE|L1 43068 NM_015904 9669 Hs.158688 NM_015904 ENSG00000158417 EIF5B IF2 eukaryotic translation initiation factor 5B protein-coding chr2-7900 chr2 55479032 55479242 + 9.19 0.000 Intergenic MER5A|DNA|hAT-Charlie -40458 NM_001282761 112942 Hs.264208 NM_080667 ENSG00000163001 CFAP36 BARTL1|CCDC104 cilia and flagella associated protein 36 protein-coding chr2-3373 chr2 7567866 7568076 + 9.19 0.000 Intergenic Intergenic 146710 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr3-6585 chr3 124707845 124708055 + 9.19 0.000 intron (NM_007064, intron 24 of 26) L1MEf|LINE|L1 -22416 NR_033437 7372 Hs.2057 NM_000373 ENSG00000114491 UMPS OPRT uridine monophosphate synthetase protein-coding chr5-4734 chr5 44039030 44039240 + 9.19 0.000 Intergenic L1PA11|LINE|L1 -349597 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr5-5684 chr5 160767944 160768154 + 9.19 0.000 intron (NM_001366652, intron 2 of 24) intron (NM_001366652, intron 2 of 24) -82658 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr20-2628 chr20 42334298 42334508 + 9.19 0.000 intron (NM_133170, intron 11 of 31) L1ME4c|LINE|L1 -351080 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr17-5585 chr17 47378845 47379055 + 9.19 0.000 intron (NM_001195192, intron 11 of 21) L2a|LINE|L2 54995 NM_152347 124989 Hs.463303 NM_152347 ENSG00000178852 EFCAB13 C17orf57 EF-hand calcium binding domain 13 protein-coding chr15-1506 chr15 50691243 50691453 + 9.19 0.000 Intergenic AluJb|SINE|Alu -4551 NR_149154 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr19-4943 chr19 44764276 44764486 + 9.19 0.000 Intergenic AluJb|SINE|Alu 5724 NR_107052 102465879 NR_107052 ENSG00000284258 MIR8085 hsa-mir-8085 microRNA 8085 ncRNA chr2-6413 chr2 137790963 137791173 + 9.19 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 136864 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr10-3709 chr10 111247829 111248039 + 9.19 0.000 Intergenic MIR|SINE|MIR 133643 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr3-10019 chr3 101963935 101964145 + 9.19 0.000 intron (NR_026934, intron 2 of 3) intron (NR_026934, intron 2 of 3) 23181 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr3-9656 chr3 61098852 61099062 + 9.19 0.000 intron (NR_148922, intron 2 of 3) L1PREC2|LINE|L1 152495 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr21-1170 chr21 42339089 42339299 + 9.19 0.000 Intergenic Intergenic 11800 NM_005423 7032 Hs.2979 NM_005423 ENSG00000160181 TFF2 SML1|SP trefoil factor 2 protein-coding chr13-1585 chr13 39158494 39158704 + 9.19 0.000 Intergenic Intergenic 120143 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr2-5390 chr2 102690231 102690441 + 9.19 0.000 intron (NM_003048, intron 5 of 11) L2|LINE|L2 46552 NR_136173 84804 Hs.590898 NM_032718 ENSG00000135953 MFSD9 - major facilitator superfamily domain containing 9 protein-coding chr4-2864 chr4 72046329 72046539 + 9.19 0.000 intron (NM_053036, intron 1 of 3) MSTD|LTR|ERVL-MaLR 7302 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr3-7527 chr3 178418655 178418865 + 9.19 0.000 promoter-TSS (NR_046786) promoter-TSS (NR_046786) -441 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr2-7532 chr2 22078765 22078975 + 9.19 0.000 Intergenic Intergenic -368218 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr7-4799 chr7 92691749 92691959 + 9.19 0.000 intron (NM_001259, intron 4 of 7) intron (NM_001259, intron 4 of 7) -101464 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chrX-3700 chrX 111214738 111214948 + 9.19 0.000 intron (NM_001128172, intron 13 of 14) intron (NM_001128172, intron 13 of 14) 55640 NM_014289 827 Hs.496593 NM_014289 ENSG00000077274 CAPN6 CANPX|CAPNX|CalpM|DJ914P14.1 calpain 6 protein-coding chr2-14514 chr2 228301032 228301242 + 9.19 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -119450 NM_001142644 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr21-1262 chr21 15001354 15001564 + 9.19 0.000 intron (NM_003489, intron 3 of 3) intron (NM_003489, intron 3 of 3) 63541 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr15-3038 chr15 59338413 59338623 + 9.19 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 34353 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr13-306 chr13 91348815 91349025 + 9.19 0.000 intron (NR_027350, intron 1 of 1) CpG 1100 NR_027350 407975 Hs.24115 NR_027349 ENSG00000215417 MIR17HG C13orf25|FGLDS2|LINC00048|MIHG1|MIRH1|MIRHG1|NCRNA00048|miR-17-92 miR-17-92a-1 cluster host gene ncRNA chr15-2110 chr15 68617215 68617425 + 9.19 0.000 intron (NM_001190456, intron 1 of 11) intron (NM_001190456, intron 1 of 11) 780 NM_001190456 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr3-8500 chr3 129522666 129522876 + 9.19 0.000 Intergenic AluJo|SINE|Alu -5868 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr3-7023 chr3 171806457 171806667 + 9.19 0.000 intron (NM_002662, intron 1 of 26) intron (NM_002662, intron 1 of 26) 3921 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr2-4954 chr2 180675400 180675610 + 9.19 0.000 Intergenic Intergenic -16599 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr10-6925 chr10 50556650 50556860 + 9.19 0.000 intron (NM_147156, intron 2 of 10) MER99|DNA|hAT? 67201 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chrX-1430 chrX 47328828 47329038 + 9.19 0.000 Intergenic AluJr|SINE|Alu -41667 NM_003446 7712 Hs.89897 NM_003446 ENSG00000147117 ZNF157 HZF22 zinc finger protein 157 protein-coding chr5-8786 chr5 149054565 149054775 + 9.19 0.000 intron (NM_024577, intron 1 of 16) MER102a|DNA|hAT-Charlie 7739 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr6-3738 chr6 6916792 6917002 + 9.19 0.000 Intergenic L2b|LINE|L2 -190846 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr3-3822 chr3 24067489 24067699 + 9.19 0.000 Intergenic MLT2B4|LTR|ERVL 35653 NR_026834 152024 Hs.385606 NR_026834 ENSG00000224074 LINC00691 - long intergenic non-protein coding RNA 691 ncRNA chr19-5926 chr19 49790247 49790457 + 9.19 0.000 intron (NM_130787, intron 4 of 22) MLT1D|LTR|ERVL-MaLR -1514 NR_106857 102465479 NR_106857 ENSG00000276270 MIR6799 hsa-mir-6799 microRNA 6799 ncRNA chr6-3114 chr6 98832967 98833177 + 9.19 0.000 Intergenic CpG -1372 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr18-2266 chr18 74434700 74434910 + 9.19 0.000 TTS (NM_001044369) TTS (NM_001044369) 22463 NM_001044369 125704 Hs.371690 NM_001044369 ENSG00000187773 DIPK1C C18orf51|FAM69C divergent protein kinase domain 1C protein-coding chr1-4399 chr1 183561280 183561490 + 9.19 0.000 intron (NM_001190794, intron 12 of 13) MIRc|SINE|MIR 29219 NM_001190789 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr3-4206 chr3 132369215 132369425 + 9.19 0.000 Intergenic MamGypLTR1b|LTR|Gypsy -48182 NM_001329126 23317 Hs.12707 NM_015268 ENSG00000138246 DNAJC13 PARK21|RME8 DnaJ heat shock protein family (Hsp40) member C13 protein-coding chr12-3044 chr12 4270863 4271073 + 9.19 0.000 intron (NR_149145, intron 1 of 3) CpG -2794 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chrX-4518 chrX 66435087 66435297 + 9.19 0.000 Intergenic Intergenic 180838 NM_001242310 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr6-5592 chr6 36768607 36768817 + 9.19 0.000 intron (NM_020939, intron 10 of 20) intron (NM_020939, intron 10 of 20) -11303 NM_001314018 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr1-5087 chr1 110421309 110421519 + 9.19 0.000 Intergenic LTR8B|LTR|ERV1 -13490 NM_006402 10542 Hs.439815 NM_006402 ENSG00000134248 LAMTOR5 HBXIP|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding chr4-8685 chr4 180920532 180920742 + 9.19 0.000 Intergenic Intergenic 238512 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr2-8191 chr2 88380667 88380877 + 9.19 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 71921 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr1-7547 chr1 195253426 195253636 + 9.19 0.000 Intergenic MLT2F|LTR|ERVL 835184 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr14-1236 chr14 102504827 102505037 + 9.19 0.000 3' UTR (NM_001348651, exon 4 of 4) 3' UTR (NM_001348651, exon 4 of 4) 4844 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr6-2586 chr6 77588225 77588435 + 9.19 0.000 Intergenic Intergenic -61944 NM_001282136 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr1-10085 chr1 94698860 94699070 + 9.19 0.000 intron (NR_160779, intron 2 of 5) intron (NR_160779, intron 2 of 5) 46935 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr16-4321 chr16 30027523 30027733 + 9.19 0.000 exon (NM_001353379, exon 5 of 5) exon (NM_001353379, exon 5 of 5) 2456 NM_001318504 83723 Hs.558560 NM_031478 ENSG00000149926 TLCD3B FAM57B|FP1188 TLC domain containing 3B protein-coding chr22-2325 chr22 39623749 39623959 + 9.19 0.000 intron (NM_001003406, intron 4 of 35) (TG)n|Simple_repeat|Simple_repeat 53101 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr16-2338 chr16 31869576 31869786 + 9.19 0.000 Intergenic Intergenic -4077 NR_049749 10308 Hs.460645 NM_003414 ENSG00000185947 ZNF267 HZF2 zinc finger protein 267 protein-coding chrX-2500 chrX 93418925 93419135 + 9.19 0.000 Intergenic MER50-int|LTR|ERV1 254548 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr22-1582 chr22 46532553 46532763 + 9.19 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 4962 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr7-3515 chr7 5538815 5539025 + 9.19 0.000 Intergenic Intergenic -8319 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr5-5802 chr5 176568270 176568480 + 9.19 0.000 intron (NM_017675, intron 3 of 31) intron (NM_017675, intron 3 of 31) 19033 NM_017675 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding chr11-6009 chr11 23384977 23385187 + 9.19 0.000 Intergenic Intergenic 34108 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr11-10363 chr11 111361862 111362072 + 9.19 0.000 intron (NM_006235, intron 1 of 4) L3|LINE|CR1 14210 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chr9-5324 chr9 87503660 87503870 + 9.19 0.000 intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) 5230 NM_001288729 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr1-12246 chr1 217850434 217850644 + 9.19 0.000 intron (NM_138796, intron 9 of 10) intron (NM_138796, intron 9 of 10) -42361 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chrX-4512 chrX 66053990 66054200 + 9.19 0.000 Intergenic Intergenic -13970 NM_001184830 11326 Hs.8904 NM_007268 ENSG00000155659 VSIG4 CRIg|Z39IG V-set and immunoglobulin domain containing 4 protein-coding chr3-2089 chr3 15269587 15269797 + 9.19 0.000 intron (NM_001018009, intron 4 of 8) intron (NM_001018009, intron 4 of 8) 15508 NR_046084 100505696 Hs.745026 NR_046084 ENSG00000224660 SH3BP5-AS1 - SH3BP5 antisense RNA 1 ncRNA chr1-12037 chr1 111922365 111922575 + 9.19 0.000 intron (NM_172198, intron 2 of 6) MIR|SINE|MIR 12813 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr10-8645 chr10 99466945 99467155 + 9.19 0.000 Intergenic Intergenic -36426 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr7-8014 chr7 17558032 17558242 + 9.19 0.000 intron (NR_110013, intron 1 of 3) intron (NR_110013, intron 1 of 3) 772 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr1-8702 chr1 226986650 226986860 + 9.19 0.000 3' UTR (NM_020247, exon 15 of 15) 3' UTR (NM_020247, exon 15 of 15) 46461 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr10-1399 chr10 79137691 79137901 + 9.19 0.000 intron (NM_020338, intron 2 of 24) intron (NM_020338, intron 2 of 24) 68830 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr13-3017 chr13 19569386 19569596 + 9.19 0.000 Intergenic AluJr|SINE|Alu -7917 NR_073485 93492 Hs.377488 NM_130785 ENSG00000132958 TPTE2 TPIP transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 protein-coding chr2-5627 chr2 189599322 189599532 + 9.19 0.000 Intergenic Intergenic -18616 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr9-4064 chr9 117887726 117887936 + 9.19 0.000 Intergenic Intergenic 183428 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr5-2090 chr5 6140307 6140517 + 9.19 0.000 Intergenic Intergenic 196880 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr2-4552 chr2 52269666 52269876 + 9.19 0.000 intron (NR_135237, intron 7 of 10) FLAM_C|SINE|Alu -100877 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr14-2873 chr14 33449134 33449344 + 9.19 0.000 intron (NM_001165893, intron 3 of 10) intron (NM_001165893, intron 3 of 10) -259698 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr2-4680 chr2 216633663 216633873 + 9.19 0.000 exon (NM_000597, exon 1 of 4) exon (NM_000597, exon 1 of 4) 348 NM_000597 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr7-4353 chr7 50393100 50393310 + 9.19 0.000 intron (NM_001220765, intron 6 of 6) intron (NM_001220765, intron 6 of 6) 57145 NM_001346560 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr17-3531 chr17 72428388 72428598 + 9.19 0.000 intron (NR_137280, intron 1 of 3) intron (NR_137280, intron 1 of 3) 85682 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr15-4738 chr15 68474922 68475132 + 9.19 0.000 Intergenic L1MC4a|LINE|L1 -42864 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr13-3747 chr13 42147975 42148185 + 9.19 0.000 intron (NR_123715, intron 2 of 31) intron (NR_123715, intron 2 of 31) 10022 NM_001297429 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr15-3419 chr15 89939878 89940088 + 9.19 0.000 Intergenic Intergenic -27031 NM_182616 348110 Hs.6734 NM_182616 ENSG00000242498 ARPIN C15orf38 actin related protein 2/3 complex inhibitor protein-coding chr13-3561 chr13 25097400 25097610 + 9.19 0.000 exon (NM_030979, exon 1 of 1) exon (NM_030979, exon 1 of 1) 1367 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr9-3183 chr9 127216690 127216900 + 9.19 0.000 intron (NM_001322322, intron 19 of 19) L3|LINE|CR1 -46867 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr13-1882 chr13 32649274 32649484 + 9.19 0.000 intron (NM_015032, intron 2 of 34) intron (NM_015032, intron 2 of 34) 62927 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr3-6977 chr3 167555968 167556178 + 9.19 0.000 intron (NM_001348951, intron 9 of 18) Tigger3a|DNA|TcMar-Tigger -81941 NM_001012303 5276 Hs.445555 NM_006217 ENSG00000114204 SERPINI2 MEPI|PANCPIN|PI14|TSA2004 serpin family I member 2 protein-coding chr10-1888 chr10 109889951 109890161 + 9.19 0.000 intron (NM_001324134, intron 3 of 18) intron (NM_001324134, intron 3 of 18) 33190 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr3-8794 chr3 5412312 5412522 + 9.19 0.000 Intergenic L1PA7|LINE|L1 -162162 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr2-6445 chr2 156979378 156979588 + 9.19 0.000 Intergenic L1M3c|LINE|L1 -278222 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr17-3512 chr17 59551782 59551992 + 9.19 0.000 Intergenic L1ME1|LINE|L1 -13723 NM_001166301 79665 Hs.29403 NM_024612 ENSG00000108406 DHX40 ARG147|DDX40|PAD DEAH-box helicase 40 protein-coding chr13-2376 chr13 40229164 40229374 + 9.19 0.000 Intergenic L2c|LINE|L2 -8767 NR_033877 400123 Hs.577960 NR_033877 ENSG00000215483 LINC00548 - long intergenic non-protein coding RNA 548 ncRNA chr17-4484 chr17 66620464 66620674 + 9.19 0.000 intron (NM_002737, intron 3 of 16) MLT1J|LTR|ERVL-MaLR -166503 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr2-6980 chr2 133887265 133887475 + 9.19 0.000 Intergenic Intergenic -232565 NM_001371457 chr5-1843 chr5 109740383 109740593 + 9.19 0.000 intron (NM_002372, intron 4 of 21) intron (NM_002372, intron 4 of 21) 51122 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr4-4449 chr4 53781725 53781935 + 9.19 0.000 Intergenic Intergenic 85929 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr17-4477 chr17 64466586 64466796 + 9.19 0.000 intron (NM_001369493, intron 8 of 9) intron (NM_001369493, intron 8 of 9) 17576 NM_001291316 284021 Hs.631749 NM_001085423 ENSG00000271605 MILR1 Allergin-1|C17orf60|MCA-32|MCA32 mast cell immunoglobulin like receptor 1 protein-coding chrX-2811 chrX 134923044 134923254 + 9.19 0.000 Intergenic Intergenic -7892 NM_001306188 56180 Hs.590789 NM_019556 ENSG00000101928 MOSPD1 DJ473B4 motile sperm domain containing 1 protein-coding chr2-13422 chr2 142191719 142191929 + 9.19 0.000 Intergenic Intergenic -60123 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr11-9432 chr11 60775561 60775771 + 9.19 0.000 non-coding (NR_103481, exon 8 of 8) non-coding (NR_103481, exon 8 of 8) -9667 NM_206893 341116 Hs.591956 NM_206893 ENSG00000172689 MS4A10 CD20L7|MS4A9 membrane spanning 4-domains A10 protein-coding chrX-1961 chrX 9083295 9083505 + 9.19 0.000 Intergenic AluJo|SINE|Alu -49273 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding chr12-3530 chr12 132461636 132461846 + 9.19 0.000 Intergenic Intergenic -28410 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr3-8438 chr3 115907627 115907837 + 9.19 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) -2606 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr10-7369 chr10 2049715 2049925 + 9.19 0.000 Intergenic Intergenic 26269 NR_106720 102465944 NR_106720 ENSG00000278069 MIR6072 hsa-mir-6072 microRNA 6072 ncRNA chr9-3090 chr9 33649095 33649305 + 9.19 0.000 Intergenic Intergenic 24975 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr3-10895 chr3 170999672 170999882 + 9.19 0.000 intron (NM_001278658, intron 7 of 9) intron (NM_001278658, intron 7 of 9) 26943 NM_001278659 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr12-4855 chr12 59166741 59166951 + 9.19 0.000 Intergenic Intergenic -246308 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr2-9884 chr2 215075400 215075610 + 9.19 0.000 intron (NR_103740, intron 2 of 54) MIR3|SINE|MIR -43419 NM_015657 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr8-2442 chr8 111954027 111954237 + 9.19 0.000 Intergenic MER74C|LTR|ERVL 577493 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr12-2772 chr12 54157184 54157394 + 9.19 0.000 Intergenic Intergenic 31218 NR_026656 400043 Hs.19193 NR_026656 ENSG00000250742 LINC02381 - long intergenic non-protein coding RNA 2381 ncRNA chr11-3653 chr11 112773393 112773603 + 9.19 0.000 Intergenic L2c|LINE|L2 -187922 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr2-11698 chr2 9390833 9391043 + 9.19 0.000 intron (NM_001135191, intron 22 of 26) intron (NM_001135191, intron 22 of 26) 31653 NR_134951 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr12-5031 chr12 85441905 85442115 + 9.19 0.000 Intergenic Intergenic 161790 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr20-2605 chr20 39070858 39071068 + 9.19 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 108619 NR_033905 60625 Hs.444520 NM_021931 ENSG00000101452 DHX35 C20orf15|DDX35|KAIA0875 DEAH-box helicase 35 protein-coding chr20-2984 chr20 37978314 37978524 + 9.19 0.000 Intergenic AluYm1|SINE|Alu 55037 NM_001303457 9675 Hs.655481 NM_014657 ENSG00000101407 TTI1 KIAA0406|smg-10 TELO2 interacting protein 1 protein-coding chr4-5236 chr4 169234698 169234908 + 9.19 0.000 intron (NM_020870, intron 2 of 11) MER20|DNA|hAT-Charlie 36153 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr2-8794 chr2 167675928 167676138 + 9.19 0.000 Intergenic Intergenic -142639 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr6-8620 chr6 170014224 170014434 + 9.19 0.000 Intergenic Intergenic 51706 NR_027434 100131532 Hs.703417 NR_027434 LOC100131532 - uncharacterized LOC100131532 ncRNA chr9-1520 chr9 109345544 109345754 + 9.19 0.000 Intergenic Intergenic -24685 NM_019114 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr20-2739 chr20 50092507 50092717 + 9.19 0.000 intron (NM_022442, intron 2 of 3) intron (NM_022442, intron 2 of 3) 20538 NM_001282577 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chrX-2048 chrX 17769882 17770092 + 9.19 0.000 Intergenic Intergenic 32494 NM_001037536 6322 Hs.109655 NM_006746 ENSG00000047634 SCML1 - Scm polycomb group protein like 1 protein-coding chr17-4283 chr17 73522569 73522779 + 9.19 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 8991 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr5-8379 chr5 123411082 123411292 + 9.19 0.000 intron (NM_153223, intron 5 of 20) L1MC1|LINE|L1 12405 NM_153223 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr2-6579 chr2 227817910 227818120 + 9.19 0.000 TTS (NM_001130046) TTS (NM_001130046) 4173 NM_004591 6364 Hs.75498 NM_004591 ENSG00000115009 CCL20 CKb4|Exodus|LARC|MIP-3-alpha|MIP-3a|MIP3A|SCYA20|ST38 C-C motif chemokine ligand 20 protein-coding chr10-3730 chr10 116015065 116015275 + 9.19 0.000 Intergenic Intergenic 179619 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr1-9406 chr1 31723910 31724120 + 9.19 0.000 Intergenic Intergenic -19998 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr12-3304 chr12 77566465 77566675 + 9.19 0.000 Intergenic Intergenic -264324 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr17-7984 chr17 48657835 48658045 + 9.19 0.000 Intergenic AluSx1|SINE|Alu -25381 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr1-12179 chr1 192349130 192349340 + 9.19 0.000 intron (NM_001039152, intron 3 of 4) intron (NM_001039152, intron 3 of 4) 32243 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr11-2688 chr11 95107325 95107535 + 9.19 0.000 intron (NM_015036, intron 1 of 1) intron (NM_015036, intron 1 of 1) 17584 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding chr1-9659 chr1 48072581 48072791 + 9.19 0.000 Intergenic Intergenic -75301 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr7-4833 chr7 101553419 101553629 + 9.19 0.000 intron (NM_133457, intron 11 of 12) L2b|LINE|L2 15482 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr3-2100 chr3 37904694 37904904 + 9.19 0.000 intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) 42919 NM_005808 10217 Hs.475963 NM_005808 ENSG00000144677 CTDSPL C3orf8|HYA22|PSR1|RBSP3|SCP3 CTD small phosphatase like protein-coding chr3-10162 chr3 116345659 116345869 + 9.19 0.000 intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) -14260 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA chr10-3361 chr10 15625189 15625399 + 9.19 0.000 intron (NM_001291494, intron 12 of 28) intron (NM_001291494, intron 12 of 28) 94628 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr2-7865 chr2 51498969 51499179 + 9.19 0.000 intron (NR_135237, intron 4 of 10) L1PA5|LINE|L1 466473 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr2-8281 chr2 101956681 101956891 + 9.19 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -26679 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr5-2914 chr5 133057176 133057386 + 9.19 0.000 intron (NM_002154, intron 1 of 18) intron (NM_002154, intron 1 of 18) 5268 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr3-6492 chr3 112001027 112001237 + 9.19 0.000 intron (NM_001008272, intron 3 of 4) intron (NM_001008272, intron 3 of 4) 1972 NM_001008273 29114 Hs.169330 NM_013259 ENSG00000144834 TAGLN3 NP22|NP24|NP25 transgelin 3 protein-coding chr7-5676 chr7 65448777 65448987 + 9.19 0.000 Intergenic Intergenic 75027 NM_001287533 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr11-5028 chr11 83572627 83572837 + 9.19 0.000 intron (NM_001142699, intron 19 of 27) L3|LINE|CR1 109693 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr5-2598 chr5 111930326 111930536 + 9.19 0.000 intron (NR_046678, intron 1 of 3) intron (NR_046678, intron 1 of 3) 17923 NR_046678 100873948 Hs.147716 NR_046678 ENSG00000250095 NREP-AS1 - NREP antisense RNA 1 ncRNA chr17-7237 chr17 1527538 1527748 + 9.19 0.000 intron (NM_006224, intron 10 of 11) intron (NM_006224, intron 10 of 11) 10724 NR_028514 100306951 Hs.633815 NR_028514 ENSG00000236618 PITPNA-AS1 - PITPNA antisense RNA 1 ncRNA chr8-4510 chr8 120915525 120915735 + 9.19 0.000 Intergenic MER102b|DNA|hAT-Charlie -103584 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr8-4243 chr8 90236102 90236312 + 9.19 0.000 intron (NR_051989, intron 1 of 3) intron (NR_051989, intron 1 of 3) 14719 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr1-14876 chr1 81103615 81103825 + 9.19 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -202472 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr9-6976 chr9 108387121 108387331 + 9.19 0.000 Intergenic Intergenic 468760 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr22-3540 chr22 12639587 12639797 + 9.19 0.000 Intergenic L1PB1|LINE|L1 742286 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr10-7615 chr10 21688152 21688362 + 9.19 0.000 intron (NM_001195626, intron 13 of 22) Tigger20a|DNA|TcMar-Tigger 154085 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr11-3496 chr11 117747420 117747630 + 9.19 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 49691 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr16-3191 chr16 84514446 84514656 + 9.19 0.000 Intergenic Intergenic -9892 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr8-5366 chr8 21063987 21064197 + 9.19 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 90106 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LINC02153 - long intergenic non-protein coding RNA 2153 ncRNA chr13-2294 chr13 30466974 30467184 + 9.19 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) -1102 NM_001363661 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr8-2013 chr8 100889448 100889658 + 9.19 0.000 Intergenic L2b|LINE|L2 61018 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr13-1608 chr13 46135044 46135254 + 9.19 0.000 intron (NM_002298, intron 13 of 15) intron (NM_002298, intron 13 of 15) -30073 NM_001278541 1361 Hs.512937 NM_001872 ENSG00000080618 CPB2 CPU|PCPB|TAFI carboxypeptidase B2 protein-coding chr17-6899 chr17 33633591 33633801 + 9.19 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -99936 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr17-3900 chr17 50749214 50749424 + 9.19 0.000 intron (NM_006107, intron 9 of 10) intron (NM_006107, intron 9 of 10) 18199 NM_001358683 55018 Hs.389460 NM_017928 ENSG00000167117 ANKRD40CL C17orf73|LINC00483 ANKRD40 C-terminal like protein-coding chr8-4413 chr8 107166981 107167191 + 9.19 0.000 Intergenic Intergenic 169429 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr22-2520 chr22 24176620 24176830 + 9.19 0.000 intron (NM_012295, intron 35 of 36) intron (NM_012295, intron 35 of 36) -4762 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr9-5070 chr9 33753956 33754166 + 9.19 0.000 intron (NM_001197098, intron 1 of 4) (TCTTT)n|Simple_repeat|Simple_repeat 3240 NM_001197098 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr13-1337 chr13 33838689 33838899 + 9.19 0.000 intron (NM_181558, intron 8 of 8) L1M4a1|LINE|L1 20645 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr5-5629 chr5 154784867 154785077 + 9.19 0.000 intron (NM_001367719, intron 1 of 18) intron (NM_001367719, intron 1 of 18) 27818 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr1-8170 chr1 18163748 18163958 + 9.19 0.000 intron (NM_032880, intron 1 of 9) intron (NM_032880, intron 1 of 9) 56055 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr3-3874 chr3 39096866 39097076 + 9.19 0.000 TTS (NM_001303403) TTS (NM_001303403) 10656 NR_103866 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding chr12-6522 chr12 109370930 109371140 + 9.19 0.000 Intergenic Intergenic -11547 NR_120462 101928138 Hs.143843 NR_120462 ENSG00000256560 LINC01486 - long intergenic non-protein coding RNA 1486 ncRNA chr8-4119 chr8 72978680 72978890 + 9.19 0.000 Intergenic MER20|DNA|hAT-Charlie -30079 NM_017489 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding chr2-7108 chr2 178877700 178877910 + 9.19 0.000 3' UTR (NM_001316745, exon 12 of 12) 3' UTR (NM_001316745, exon 12 of 12) -70382 NM_001256850 7273 Hs.134602 NM_003319 ENSG00000155657 TTN CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|LGMDR10|MYLK5|SALMY|TMD titin protein-coding chr7-2963 chr7 284914 285124 + 9.19 0.000 Intergenic Intergenic 92448 NM_020223 56975 Hs.134742 NM_020223 ENSG00000177706 FAM20C DMP-4|DMP4|G-CK|GEF-CK|RNS FAM20C golgi associated secretory pathway kinase protein-coding chr17-2808 chr17 9512301 9512511 + 9.19 0.000 intron (NR_033656, intron 2 of 5) L1MA5A|LINE|L1 63414 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr3-6700 chr3 132921978 132922188 + 9.19 0.000 Intergenic Intergenic -116205 NM_023943 66000 Hs.191616 NM_023943 ENSG00000144868 TMEM108 CT124|RTLN transmembrane protein 108 protein-coding chr19-3936 chr19 49301253 49301463 + 9.19 0.000 intron (NM_014037, intron 7 of 11) L1M3c|LINE|L1 7510 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr10-7620 chr10 22279715 22279925 + 9.19 0.000 Intergenic L2a|LINE|L2 27748 NR_038921 100130992 Hs.48501 NR_038921 LOC100130992 - uncharacterized LOC100130992 ncRNA chrX-2286 chrX 51336622 51336832 + 9.19 0.000 3' UTR (NM_001304963, exon 2 of 2) 3' UTR (NM_001304963, exon 2 of 2) 3905 NM_001304963 170685 Hs.375178 NM_153183 ENSG00000122824 NUDT10 APS2|DIPP3-alpha|DIPP3a nudix hydrolase 10 protein-coding chr20-2885 chr20 62964003 62964213 + 9.19 0.000 intron (NM_001302643, intron 8 of 13) intron (NM_001302643, intron 8 of 13) 11399 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr2-13265 chr2 127296203 127296413 + 9.19 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -2132 NM_000122 2071 Hs.469872 NM_000122 ENSG00000163161 ERCC3 BTF2|GTF2H|RAD25|TFIIH|TTD2|XPB ERCC excision repair 3, TFIIH core complex helicase subunit protein-coding chr17-5554 chr17 44467029 44467239 + 9.19 0.000 5' UTR (NM_001304940, exon 4 of 10) 5' UTR (NM_001304940, exon 4 of 10) -30283 NM_001304943 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr12-4575 chr12 30376598 30376808 + 9.19 0.000 Intergenic L1PA10|LINE|L1 300541 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr6-5715 chr6 138680378 138680588 + 9.19 0.000 Intergenic Intergenic -11185 NR_033896 441172 Hs.92290 NR_033896 FLJ46906 - uncharacterized LOC441172 ncRNA chr20-1148 chr20 48771626 48771836 + 9.19 0.000 intron (NM_020820, intron 1 of 39) MIR|SINE|MIR 56268 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr17-3502 chr17 50838819 50839029 + 9.19 0.000 intron (NM_175575, intron 1 of 1) intron (NM_175575, intron 1 of 1) 3338 NM_175575 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr13-3447 chr13 108875103 108875313 + 9.19 0.000 intron (NM_015011, intron 12 of 34) intron (NM_015011, intron 12 of 34) 245597 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr20-4361 chr20 56252417 56252627 + 9.19 0.000 Intergenic Intergenic 3790 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr7-9360 chr7 129759703 129759913 + 9.19 0.000 Intergenic MIR|SINE|MIR 10684 NR_029614 406958 NR_029614 ENSG00000207990 MIR182 MIRN182|miRNA182|mir-182 microRNA 182 ncRNA chr6-3028 chr6 52697984 52698194 + 9.19 0.000 Intergenic LTR50|LTR|ERVL 26976 NM_014051 28978 Hs.94896 NM_014051 ENSG00000096092 TMEM14A C6orf73|PTD011 transmembrane protein 14A protein-coding chr20-3698 chr20 15100553 15100763 + 9.19 0.000 intron (NM_001351663, intron 5 of 17) intron (NM_001351663, intron 5 of 17) -96182 NM_001351664 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr1-5265 chr1 204977834 204978044 + 9.19 0.000 TTS (NM_001160333) TTS (NM_001160333) 33713 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr5-3434 chr5 154045705 154045915 + 9.19 0.000 intron (NM_001242336, intron 1 of 2) intron (NM_001242336, intron 1 of 2) 6843 NM_005927 4238 Hs.432818 NM_005927 ENSG00000037749 MFAP3 - microfibril associated protein 3 protein-coding chr14-2449 chr14 76510530 76510740 + 9.19 0.000 Intergenic Intergenic 139288 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr1-5417 chr1 21944420 21944630 + 9.19 0.000 Intergenic Intergenic -7215 NM_005529 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr4-1839 chr4 122716968 122717178 + 9.19 0.000 Intergenic Intergenic 15385 NR_024041 729338 Hs.647968 NR_024041 CETN4P - centrin 4, pseudogene pseudo chrX-2857 chrX 140952463 140952673 + 9.19 0.000 Intergenic MER5A1|DNA|hAT-Charlie -26337 NR_031725 100302169 NR_031725 ENSG00000221081 MIR320D2 MIR320D-2|MIRN320D2|hsa-mir-320d-2|mir-320d-2 microRNA 320d-2 ncRNA chr22-2225 chr22 21989321 21989531 + 9.19 0.000 Intergenic Intergenic -6639 NM_001349848 8940 Hs.436401 NM_003935 ENSG00000100038 TOP3B TOP3B1 DNA topoisomerase III beta protein-coding chr20-1501 chr20 32458438 32458648 + 9.19 0.000 intron (NM_001351680, intron 2 of 8) intron (NM_001351680, intron 2 of 8) 24947 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr10-6020 chr10 125632344 125632554 + 9.19 0.000 intron (NM_001318133, intron 3 of 3) L2a|LINE|L2 50714 NM_001128202 387718 Hs.148259 NM_001128202 ENSG00000175018 TEX36 C10orf122|bA383C5.1 testis expressed 36 protein-coding chr22-1259 chr22 24352536 24352746 + 9.19 0.000 intron (NM_015330, intron 11 of 16) intron (NM_015330, intron 11 of 16) 10533 NM_001254733 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chrX-2276 chrX 49901282 49901492 + 9.19 0.000 Intergenic MER67C|LTR|ERV1 -21209 NM_001127899 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr11-7014 chr11 117788816 117789026 + 9.19 0.000 intron (NM_001367905, intron 1 of 6) intron (NM_001367905, intron 1 of 6) 8295 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr1-14566 chr1 53230280 53230490 + 9.19 0.000 intron (NM_002370, intron 3 of 4) intron (NM_002370, intron 3 of 4) 8133 NM_002370 4116 Hs.421576 NM_002370 ENSG00000162385 MAGOH MAGOH1|MAGOHA mago homolog, exon junction complex subunit protein-coding chr19-2183 chr19 16023554 16023764 + 9.19 0.000 intron (NR_026828, intron 7 of 8) intron (NR_026828, intron 7 of 8) 8025 NR_026828 126536 Hs.131824 NR_026828 ENSG00000205396 LINC00661 - long intergenic non-protein coding RNA 661 ncRNA chr12-6252 chr12 42091677 42091887 + 9.19 0.000 intron (NM_173601, intron 7 of 7) intron (NM_173601, intron 7 of 7) 53092 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr6-3542 chr6 43033786 43033996 + 9.19 0.000 Intergenic Intergenic 12268 NM_033112 88745 Hs.309231 NM_033112 ENSG00000124541 RRP36 C6orf153|dJ20C7.4 ribosomal RNA processing 36 protein-coding chr7-7884 chr7 6168366 6168576 + 9.19 0.000 intron (NM_001367581, intron 10 of 13) intron (NM_001367581, intron 10 of 13) 3666 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr11-6830 chr11 95256406 95256616 + 9.19 0.000 Intergenic Intergenic -24036 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr6-5102 chr6 119791978 119792188 + 9.19 0.000 intron (NR_134600, intron 2 of 3) MER54B|LTR|ERVL -223096 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr12-5406 chr12 121512446 121512656 + 9.19 0.000 intron (NM_001005366, intron 10 of 22) intron (NM_001005366, intron 10 of 22) 67695 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr1-16045 chr1 201401420 201401630 + 9.19 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -2201 NM_005558 3898 Hs.519035 NM_005558 ENSG00000159166 LAD1 LadA ladinin 1 protein-coding chr11-7830 chr11 111819254 111819464 + 9.19 0.000 intron (NR_147984, intron 13 of 15) intron (NR_147984, intron 13 of 15) 51922 NM_001352419 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chrX-4396 chrX 52038815 52039025 + 9.19 0.000 Intergenic L1M1|LINE|L1 24553 NR_102368 101340250 NR_102368 ENSG00000221705 SNORA11E - small nucleolar RNA, H/ACA box 11E snoRNA chr19-1419 chr19 49659876 49660086 + 9.19 0.000 intron (NR_045568, intron 7 of 7) intron (NR_045568, intron 7 of 7) -5161 NR_104200 83596 Hs.289052 NM_138639 ENSG00000126453 BCL2L12 - BCL2 like 12 protein-coding chr8-3634 chr8 604014 604224 + 9.19 0.000 Intergenic L1MD3|LINE|L1 -58338 NM_175075 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr10-4617 chr10 118070020 118070230 + 9.19 0.000 intron (NR_026940, intron 3 of 3) L2c|LINE|L2 -23184 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr9-6083 chr9 137405408 137405618 + 9.19 0.000 intron (NM_001286823, intron 1 of 7) intron (NM_001286823, intron 1 of 7) 17649 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr7-3523 chr7 6219938 6220148 + 9.19 0.000 intron (NM_001367581, intron 1 of 13) AluSz|SINE|Alu -47906 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr4-4194 chr4 11857747 11857957 + 9.19 0.000 Intergenic Intergenic 74674 NR_162127 113218507 NR_162127 MIR12113 - microRNA 12113 ncRNA chr12-4232 chr12 108175892 108176102 + 9.19 0.000 intron (NM_001304447, intron 2 of 9) AluYj4|SINE|Alu 44211 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr6-2962 chr6 36734985 36735195 + 9.19 0.000 Intergenic MIR|SINE|MIR 22310 NM_001314020 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr18-1946 chr18 35916021 35916231 + 9.19 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -11200 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr11-6852 chr11 98195681 98195891 + 9.19 0.000 Intergenic Intergenic -825163 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr8-2246 chr8 42509082 42509292 + 9.19 0.000 intron (NM_006749, intron 1 of 10) (ATATAG)n|Simple_repeat|Simple_repeat -7956 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr3-7082 chr3 178565182 178565392 + 9.19 0.000 intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 6437 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr1-13552 chr1 7191144 7191354 + 9.19 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 198505 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr12-7328 chr12 55019844 55020054 + 9.19 0.000 promoter-TSS (NM_021191) promoter-TSS (NM_021191) -25 NM_021191 58158 Hs.591024 NM_021191 ENSG00000123307 NEUROD4 ATH-3|ATH3|Atoh3|MATH-3|MATH3|bHLHa4 neuronal differentiation 4 protein-coding chr10-8440 chr10 86217205 86217415 + 9.19 0.000 intron (NM_017551, intron 2 of 15) MIR|SINE|MIR 47478 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr2-8928 chr2 184239502 184239712 + 9.19 0.000 Intergenic Intergenic -139368 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr15-3158 chr15 68031605 68031815 + 9.19 0.000 Intergenic Intergenic -22469 NM_016166 8554 Hs.162458 NM_016166 ENSG00000033800 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT 1 protein-coding chr19-6245 chr19 6580493 6580703 + 9.19 0.000 Intergenic Intergenic 10552 NM_001252 970 Hs.501497 NM_001252 ENSG00000125726 CD70 CD27-L|CD27L|CD27LG|LPFS3|TNFSF7|TNLG8A CD70 molecule protein-coding chr1-6183 chr1 203211060 203211270 + 9.19 0.000 Intergenic Intergenic 18508 NR_045785 1118 Hs.201688 NM_003465 ENSG00000133063 CHIT1 CHI3|CHIT|CHITD chitinase 1 protein-coding chr7-7851 chr7 5021833 5022043 + 9.19 0.000 Intergenic Harlequin-int|LTR|ERV1 -23922 NM_001204513 100533952 NM_001204513 ENSG00000272968 RBAK-RBAKDN RBAK|RBAK-LOC389458|ZNF769|hRBaK RBAK-RBAKDN readthrough protein-coding chr15-3500 chr15 98728939 98729149 + 9.19 0.000 intron (NM_000875, intron 2 of 20) MIRb|SINE|MIR -55382 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr11-2468 chr11 61635439 61635649 + 9.19 0.000 intron (NR_002775, intron 3 of 4) MER45A|DNA|hAT-Tip100 20508 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr16-2313 chr16 23510509 23510719 + 9.19 0.000 promoter-TSS (NM_015044) promoter-TSS (NM_015044) -120 NM_015044 23062 Hs.460336 NM_015044 ENSG00000103365 GGA2 VEAR golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding chr1-3209 chr1 161083521 161083731 + 9.19 0.000 intron (NM_030916, intron 1 of 8) intron (NM_030916, intron 1 of 8) 5932 NM_030916 81607 Hs.492490 NM_030916 ENSG00000143217 NECTIN4 EDSS1|LNIR|PRR4|PVRL4|nectin-4 nectin cell adhesion molecule 4 protein-coding chr9-3149 chr9 105694528 105694738 + 9.19 0.000 promoter-TSS (NM_018112) promoter-TSS (NM_018112) 92 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr20-2394 chr20 18748867 18749077 + 9.19 0.000 intron (NM_080820, intron 5 of 5) intron (NM_080820, intron 5 of 5) 45010 NR_026884 29075 Hs.584899 NM_014162 LINC00652 HSPC072 long intergenic non-protein coding RNA 652 ncRNA chr4-4485 chr4 57020554 57020764 + 9.19 0.000 intron (NM_001303269, intron 17 of 25) intron (NM_001303269, intron 17 of 25) 41763 NM_000938 5431 Hs.602757 NM_000938 ENSG00000047315 POLR2B POL2RB|RPB2|hRPB140 RNA polymerase II subunit B protein-coding chr1-9897 chr1 69728907 69729117 + 9.19 0.000 intron (NM_001366839, intron 3 of 25) THE1C|LTR|ERVL-MaLR 159671 NM_001366842 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr11-2939 chr11 72642881 72643091 + 9.19 0.000 promoter-TSS (NM_001243784) promoter-TSS (NM_001243784) -526 NM_001243784 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr12-3128 chr12 32755221 32755431 + 9.19 0.000 exon (NM_001040436, exon 1 of 5) exon (NM_001040436, exon 1 of 5) 571 NM_001040436 51067 Hs.505231 NM_015936 ENSG00000139131 YARS2 CGI-04|MLASA2|MT-TYRRS|TYRRS tyrosyl-tRNA synthetase 2 protein-coding chr2-8384 chr2 112294966 112295176 + 9.19 0.000 intron (NM_198581, intron 1 of 11) L1MB7|LINE|L1 19474 NM_198581 376940 Hs.190477 NM_198581 ENSG00000188177 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding chr4-1324 chr4 145733570 145733780 + 9.19 0.000 TTS (NM_001080531) TTS (NM_001080531) 53471 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr6-4197 chr6 3165918 3166128 + 9.19 0.000 Intergenic Intergenic -8479 NM_001310315 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr9-5623 chr9 118914743 118914953 + 9.19 0.000 Intergenic L1MA2|LINE|L1 235177 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr8-3721 chr8 21048099 21048309 + 9.19 0.000 Intergenic HERVL-int|LTR|ERVL 74218 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LINC02153 - long intergenic non-protein coding RNA 2153 ncRNA chr8-6435 chr8 60215179 60215389 + 9.19 0.000 intron (NM_004056, intron 7 of 8) intron (NM_004056, intron 7 of 8) 66116 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr1-9116 chr1 17873180 17873390 + 9.19 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 117952 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr11-6490 chr11 68240649 68240859 + 9.19 0.000 Intergenic AluJo|SINE|Alu -27106 NR_161380 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr20-471 chr20 63310388 63310598 + 9.19 0.000 exon (NM_020882, exon 11 of 36) exon (NM_020882, exon 11 of 36) 17307 NM_020882 57642 Hs.271285 NM_020882 ENSG00000101203 COL20A1 - collagen type XX alpha 1 chain protein-coding chr2-5179 chr2 32523874 32524084 + 9.19 0.000 intron (NM_016252, intron 57 of 73) AluJb|SINE|Alu -8174 NR_030285 693143 NR_030285 ENSG00000207653 MIR558 MIRN558|hsa-mir-558 microRNA 558 ncRNA chr2-2142 chr2 128374204 128374414 + 9.19 0.000 Intergenic Intergenic -55441 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr2-12681 chr2 75587862 75588072 + 9.19 0.000 Intergenic MER106B|DNA|hAT-Charlie -18248 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr16-3733 chr16 9491881 9492091 + 9.19 0.000 Intergenic (AAC)n|Simple_repeat|Simple_repeat -36481 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr2-7099 chr2 174807509 174807719 + 9.19 0.000 intron (NM_001025201, intron 11 of 12) intron (NM_001025201, intron 11 of 12) 40004 NM_001206602 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr15-1967 chr15 39381491 39381701 + 9.19 0.000 Intergenic L1PA15|LINE|L1 130927 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr19-4474 chr19 5523822 5524032 + 9.19 0.000 Intergenic AluSx1|SINE|Alu 44107 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr1-4694 chr1 231627485 231627695 + 9.19 0.000 intron (NM_001164556, intron 1 of 4) intron (NM_001164556, intron 1 of 4) 775 NM_001164548 27185 Hs.13318 NM_018662 ENSG00000162946 DISC1 C1orf136|SCZD9 DISC1 scaffold protein protein-coding chr6-1044 chr6 167826518 167826728 + 9.19 0.000 promoter-TSS (NM_001366319) promoter-TSS (NM_001366319) 59 NM_001366319 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding chr8-3235 chr8 140071414 140071624 + 9.19 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 29016 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr4-3406 chr4 54227984 54228194 + 9.19 0.000 Intergenic Intergenic -1204 NM_001347828 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chr1-12647 chr1 43045072 43045282 + 9.19 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 86128 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr2-4725 chr2 239179126 239179336 + 9.19 0.000 intron (NM_006037, intron 4 of 26) intron (NM_006037, intron 4 of 26) 16226 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr2-4276 chr2 231375136 231375346 + 9.19 0.000 3' UTR (NM_001271466, exon 25 of 25) 3' UTR (NM_001271466, exon 25 of 25) 12533 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr1-11204 chr1 243936167 243936377 + 9.19 0.000 intron (NR_033883, intron 1 of 11) intron (NR_033883, intron 1 of 11) 18870 NR_033883 339529 Hs.209374 NR_033883 ENSG00000226828 LINC02774 - long intergenic non-protein coding RNA 2774 ncRNA chr16-5040 chr16 58912050 58912260 + 9.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR -177839 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr6-7230 chr6 40695292 40695502 + 9.19 0.000 Intergenic Intergenic -108033 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr19-6656 chr19 33530110 33530320 + 9.19 0.000 Intergenic Intergenic -8424 NM_001166056 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr2-4113 chr2 152012805 152013015 + 9.19 0.000 intron (NM_000726, intron 2 of 13) Tigger3b|DNA|TcMar-Tigger -38932 NM_001330117 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr3-9069 chr3 26220267 26220477 + 9.19 0.000 Intergenic L1PA8|LINE|L1 -346677 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr16-4348 chr16 31453248 31453458 + 9.19 0.000 Intergenic Intergenic -4951 NM_001288767 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding chr5-6457 chr5 170486594 170486804 + 9.19 0.000 intron (NM_001034838, intron 1 of 7) MLT1N2|LTR|ERVL-MaLR -17321 NM_014592 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr17-8190 chr17 62454054 62454264 + 9.19 0.000 Intergenic Intergenic -24959 NM_001330418 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr4-2755 chr4 8639804 8640014 + 9.19 0.000 Intergenic Intergenic 47144 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr11-10210 chr11 97395021 97395231 + 9.19 0.000 Intergenic AluSg|SINE|Alu 886701 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr8-2497 chr8 13791630 13791840 + 9.19 0.000 Intergenic Intergenic 162045 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr5-4798 chr5 57412088 57412298 + 9.19 0.000 Intergenic Intergenic 70618 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr1-6253 chr1 229062916 229063126 + 9.19 0.000 Intergenic Intergenic 111780 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr13-2386 chr13 41608192 41608402 + 9.19 0.000 intron (NM_015058, intron 39 of 44) intron (NM_015058, intron 39 of 44) -39902 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr10-4905 chr10 21573373 21573583 + 9.19 0.000 intron (NM_001324297, intron 4 of 24) L1MEf|LINE|L1 39306 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr17-4598 chr17 3647865 3648075 + 9.19 0.000 intron (NM_001031681, intron 4 of 12) intron (NM_001031681, intron 4 of 12) 11210 NM_004937 1497 Hs.187667 NM_004937 ENSG00000040531 CTNS CTNS-LSB|PQLC4|SLC66A4 cystinosin, lysosomal cystine transporter protein-coding chr5-2722 chr5 118354682 118354892 + 9.19 0.000 intron (NR_104610, intron 9 of 9) MIR|SINE|MIR 72213 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr18-3357 chr18 57959021 57959231 + 9.19 0.000 Intergenic Intergenic -85100 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr10-7430 chr10 5975830 5976040 + 9.19 0.000 intron (NM_001256765, intron 1 of 7) intron (NM_001256765, intron 1 of 7) 1608 NM_002189 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr6-5268 chr6 137738203 137738413 + 9.19 0.000 intron (NR_121618, intron 1 of 2) intron (NR_121618, intron 1 of 2) 729 NR_121619 100507406 Hs.556703 NR_121618 ENSG00000234956 LINC02539 - long intergenic non-protein coding RNA 2539 ncRNA chr8-1672 chr8 38740029 38740239 + 9.19 0.000 intron (NR_148052, intron 2 of 3) intron (NR_148052, intron 2 of 3) 11552 NM_001352788 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr11-3563 chr11 45284250 45284460 + 9.19 0.000 intron (NM_001247987, intron 1 of 7) MIR|SINE|MIR 1986 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr6-5832 chr6 26276199 26276409 + 9.19 0.000 Intergenic Intergenic 3328 NM_003525 8346 Hs.553506 NM_003525 ENSG00000278588 HIST1H2BI H2B/k|H2BFK histone cluster 1 H2B family member i protein-coding chr12-4488 chr12 19575166 19575376 + 9.19 0.000 Intergenic Intergenic 134672 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr4-8358 chr4 147828442 147828652 + 9.19 0.000 intron (NM_024605, intron 3 of 22) intron (NM_024605, intron 3 of 22) 45952 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr8-1173 chr8 27426259 27426469 + 9.19 0.000 intron (NM_173175, intron 5 of 29) intron (NM_173175, intron 5 of 29) -7006 NR_106901 102465507 NR_106901 ENSG00000273836 MIR6842 hsa-mir-6842 microRNA 6842 ncRNA chr13-1994 chr13 29841594 29841804 + 9.19 0.000 intron (NM_007106, intron 1 of 4) intron (NM_007106, intron 1 of 4) 8918 NM_007106 5412 Hs.145575 NM_007106 ENSG00000122042 UBL3 HCG-1|PNSC1 ubiquitin like 3 protein-coding chr9-5591 chr9 114169657 114169867 + 9.19 0.000 intron (NM_032888, intron 3 of 60) intron (NM_032888, intron 3 of 60) 14225 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr2-13734 chr2 168349698 168349908 + 9.19 0.000 Intergenic Intergenic -102208 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr7-5356 chr7 30653556 30653766 + 9.19 0.000 intron (NM_001202481, intron 13 of 13) intron (NM_001202481, intron 13 of 13) 28795 NM_001883 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr6-7954 chr6 111957570 111957780 + 9.19 0.000 Intergenic MER20B|DNA|hAT-Charlie -48278 NR_149099 105377946 NR_149099 LINC02527 - long intergenic non-protein coding RNA 2527 ncRNA chr9-4514 chr9 69577999 69578209 + 9.19 0.000 intron (NM_001163, intron 1 of 12) intron (NM_001163, intron 1 of 12) 94267 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr2-8285 chr2 102127874 102128084 + 9.19 0.000 intron (NM_001320980, intron 1 of 11) intron (NM_001320980, intron 1 of 11) -13812 NM_001320981 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr7-4805 chr7 93564331 93564541 + 9.19 0.000 intron (NM_001164737, intron 2 of 15) intron (NM_001164737, intron 2 of 15) -4626 NM_001164738 799 Hs.489127 NM_001742 ENSG00000004948 CALCR CRT|CT-R|CTR|CTR1 calcitonin receptor protein-coding chr13-1951 chr13 99835624 99835834 + 9.19 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) -106728 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chrX-3182 chrX 40041173 40041383 + 9.19 0.000 Intergenic Intergenic 56188 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr8-6075 chr8 26391514 26391724 + 9.19 0.000 intron (NM_004331, intron 2 of 5) intron (NM_004331, intron 2 of 5) 1206 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr3-8482 chr3 126553777 126553987 + 9.19 0.000 intron (NR_130715, intron 1 of 5) L1MD2|LINE|L1 5050 NR_130715 152065 Hs.178210 NM_152533 ENSG00000180697 C3orf22 - chromosome 3 open reading frame 22 protein-coding chr2-13675 chr2 163552019 163552229 + 9.19 0.000 Intergenic Intergenic 183884 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr17-7612 chr17 27453165 27453375 + 9.19 0.000 Intergenic AluJr|SINE|Alu -3178 NM_001367810 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr19-5060 chr19 50159831 50160041 + 9.19 0.000 intron (NM_001321449, intron 2 of 7) AluSx|SINE|Alu 3345 NM_152358 126123 Hs.414175 NM_152358 ENSG00000161652 IZUMO2 C19orf41|PLAL6978|PRO21961|SCRL IZUMO family member 2 protein-coding chr9-8164 chr9 104983493 104983703 + 9.19 0.000 Intergenic Intergenic -55443 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr3-5505 chr3 195210808 195211018 + 9.19 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 37007 NM_001308069 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chrX-5334 chrX 147193315 147193525 + 9.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR -3633 NR_031709 100302114 NR_031709 ENSG00000216171 MIR513C MIRN513C|hsa-mir-513c microRNA 513c ncRNA chr16-4295 chr16 27736792 27737002 + 9.19 0.000 intron (NM_015202, intron 14 of 27) L2|LINE|L2 -17868 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr7-3837 chr7 100167705 100167915 + 9.19 0.000 intron (NM_024637, intron 1 of 3) intron (NM_024637, intron 1 of 3) 807 NM_024637 79690 Hs.44856 NM_024637 ENSG00000197093 GAL3ST4 GAL3ST-4 galactose-3-O-sulfotransferase 4 protein-coding chr3-6921 chr3 157695169 157695379 + 9.19 0.000 Intergenic Intergenic 151930 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr9-3985 chr9 137719288 137719498 + 9.19 0.000 intron (NM_001354263, intron 3 of 26) intron (NM_001354263, intron 3 of 26) 69013 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr15-1628 chr15 88455101 88455311 + 9.19 0.000 Intergenic Intergenic 12182 NM_022163 26589 Hs.534261 NM_022163 ENSG00000259494 MRPL46 C15orf4|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding chr19-2706 chr19 19511565 19511775 + 9.19 0.000 Intergenic MIR3|SINE|MIR 3878 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr6-4878 chr6 89800569 89800779 + 9.19 0.000 intron (NM_014611, intron 2 of 101) MER21C|LTR|ERVL 19120 NM_014611 23195 Hs.529948 NM_014611 ENSG00000112159 MDN1 Rea1 midasin AAA ATPase 1 protein-coding chr5-3972 chr5 11213860 11214070 + 9.19 0.000 intron (NM_001288715, intron 9 of 20) intron (NM_001288715, intron 9 of 20) 374952 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr10-6938 chr10 58095859 58096069 + 9.19 0.000 Intergenic LTR8|LTR|ERV1 171930 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr13-2743 chr13 97344481 97344691 + 9.19 0.000 intron (NM_144778, intron 4 of 8) intron (NM_144778, intron 4 of 8) -89583 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr1-5732 chr1 89021805 89022015 + 9.19 0.000 intron (NM_018284, intron 1 of 10) intron (NM_018284, intron 1 of 10) 956 NM_001319179 2635 Hs.720167 NM_018284 ENSG00000117226 GBP3 - guanylate binding protein 3 protein-coding chr12-5113 chr12 96578611 96578821 + 9.19 0.000 intron (NM_001306084, intron 20 of 67) intron (NM_001306084, intron 20 of 67) 89139 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr15-1850 chr15 52227512 52227722 + 9.19 0.000 intron (NM_018728, intron 25 of 40) intron (NM_018728, intron 25 of 40) -36225 NM_016194 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr10-6041 chr10 127324061 127324271 + 9.19 0.000 intron (NM_001290223, intron 29 of 51) intron (NM_001290223, intron 29 of 51) -127575 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr12-4373 chr12 4242809 4243019 + 9.19 0.000 Intergenic Intergenic -30848 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chr5-6651 chr5 53756325 53756535 + 9.19 0.000 Intergenic L1PA6|LINE|L1 63252 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr22-3098 chr22 47161131 47161341 + 9.19 0.000 intron (NM_001284305, intron 12 of 12) intron (NM_001284305, intron 12 of 12) -184335 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr3-2773 chr3 170802762 170802972 + 9.19 0.000 Intergenic MER68|LTR|ERVL 67328 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr6-5042 chr6 112086681 112086891 + 9.19 0.000 promoter-TSS (NM_001033564) promoter-TSS (NM_001033564) 696 NM_016262 51175 Hs.34851 NM_016262 ENSG00000074935 TUBE1 TUBE|dJ142L7.2 tubulin epsilon 1 protein-coding chr20-4335 chr20 53660772 53660982 + 9.19 0.000 Intergenic Intergenic 52523 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr11-5792 chr11 5874061 5874271 + 9.19 0.000 Intergenic Intergenic -10127 NM_001005165 390081 Hs.553739 NM_001005165 ENSG00000180974 OR52E4 OR11-55 olfactory receptor family 52 subfamily E member 4 protein-coding chr4-3830 chr4 122587716 122587926 + 9.19 0.000 Intergenic Charlie15b|DNA|hAT-Charlie -31162 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr8-7247 chr8 128041893 128042103 + 9.19 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) -7154 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr15-2010 chr15 45614308 45614518 + 9.19 0.000 Intergenic Intergenic -16735 NM_001271213 58472 Hs.511251 NM_021199 ENSG00000137767 SQOR CGI-44|PRO1975|SQR|SQRDL sulfide quinone oxidoreductase protein-coding chrX-3316 chrX 119094155 119094365 + 9.19 0.000 intron (NM_020721, intron 8 of 13) intron (NM_020721, intron 8 of 13) 56319 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr10-7805 chr10 38211543 38211753 + 9.19 0.000 intron (NR_024524, intron 6 of 6) intron (NR_024524, intron 6 of 6) 35977 NR_024524 100129055 Hs.148265 NR_024524 LOC100129055 - cyclin Y like 1 pseudogene pseudo chrX-2588 chrX 104875273 104875483 + 9.19 0.000 intron (NM_017416, intron 2 of 10) L2c|LINE|L2 309179 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr9-5622 chr9 118650250 118650460 + 9.19 0.000 Intergenic L2a|LINE|L2 -29316 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr3-3401 chr3 71075648 71075858 + 9.19 0.000 intron (NR_146142, intron 7 of 19) AluJo|SINE|Alu -10829 NM_001349344 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr12-4707 chr12 49779714 49779924 + 9.19 0.000 Intergenic THE1C|LTR|ERVL-MaLR 38010 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr2-9653 chr2 25219668 25219878 + 9.19 0.000 Intergenic Intergenic 15460 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr4-4820 chr4 108058675 108058885 + 9.19 0.000 intron (NM_001130714, intron 9 of 9) L2c|LINE|L2 54116 NM_001331027 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding chr4-7235 chr4 44500216 44500426 + 9.19 0.000 Intergenic L1P2|LINE|L1 -51512 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr10-4823 chr10 11988441 11988651 + 9.19 0.000 intron (NM_080599, intron 8 of 21) AluJr|SINE|Alu 54263 NM_015542 26019 Hs.370689 NM_015542 ENSG00000151461 UPF2 HUPF2|RENT2|smg-3 UPF2 regulator of nonsense mediated mRNA decay protein-coding chr16-2134 chr16 11659246 11659456 + 9.19 0.000 Intergenic Intergenic -9104 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr10-5441 chr10 78334758 78334968 + 9.19 0.000 Intergenic Intergenic 67521 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr11-3424 chr11 44136156 44136366 + 9.19 0.000 intron (NM_207122, intron 7 of 13) intron (NM_207122, intron 7 of 13) 40064 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr22-2995 chr22 17479549 17479759 + 9.19 0.000 intron (NM_001290046, intron 2 of 18) intron (NM_001290046, intron 2 of 18) -83785 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr6-7518 chr6 65679520 65679730 + 9.19 0.000 intron (NM_001292009, intron 1 of 43) L1MB1|LINE|L1 27600 NM_001292009 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding chr2-7362 chr2 1932811 1933021 + 9.19 0.000 intron (NM_015025, intron 9 of 24) intron (NM_015025, intron 9 of 24) -188401 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr4-3147 chr4 181030430 181030640 + 9.19 0.000 Intergenic MER57C2|LTR|ERV1 128614 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr12-5479 chr12 124834565 124834775 + 9.19 0.000 intron (NR_160424, intron 1 of 11) AluJo|SINE|Alu 5001 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr12-5218 chr12 106715509 106715719 + 9.19 0.000 intron (NM_001206691, intron 11 of 17) intron (NM_001206691, intron 11 of 17) 30885 NM_032491 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chrX-4926 chrX 110036407 110036617 + 9.19 0.000 intron (NM_001353850, intron 2 of 7) intron (NM_001353850, intron 2 of 7) -18817 NR_030381 724022 NR_030381 ENSG00000208013 MIR652 MIRN652|hsa-mir-652 microRNA 652 ncRNA chr12-5056 chr12 89574833 89575043 + 9.19 0.000 Intergenic Intergenic -48676 NM_001199782 100528030 Hs.25130 NM_001199781 ENSG00000259075 POC1B-GALNT4 GALNT4|GalNAc-T4 POC1B-GALNT4 readthrough protein-coding chr2-14481 chr2 225381356 225381566 + 9.19 0.000 Intergenic MER1A|DNA|hAT-Charlie -18249 NM_001371273 chr9-5621 chr9 118231691 118231901 + 9.19 0.000 Intergenic AluJb|SINE|Alu -447875 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr11-8350 chr11 79439123 79439333 + 9.19 0.000 intron (NM_001098816, intron 1 of 33) CpG 1802 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr14-3103 chr14 65047974 65048184 + 9.19 0.000 intron (NM_002028, intron 9 of 11) AluSz6|SINE|Alu 3391 NR_039855 100616490 NR_039855 ENSG00000266531 MIR4706 mir-4706 microRNA 4706 ncRNA chr3-10616 chr3 145633471 145633681 + 9.19 0.000 Intergenic MLT2A2|LTR|ERVL 435609 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr2-8742 chr2 160752714 160752924 + 9.19 0.000 Intergenic Intergenic -259012 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr12-5609 chr12 51529079 51529289 + 9.19 0.000 Intergenic Intergenic -62049 NM_001330260 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr13-770 chr13 22915559 22915769 + 9.19 0.000 intron (NR_138043, intron 1 of 2) CpG 705 NR_138043 100996930 Hs.380803 NR_138043 LINC00621 - long intergenic non-protein coding RNA 621 ncRNA chrX-4748 chrX 94050545 94050755 + 9.19 0.000 Intergenic MER4A1|LTR|ERV1 376444 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr12-3430 chr12 111251800 111252010 + 9.19 0.000 intron (NM_015267, intron 3 of 21) intron (NM_015267, intron 3 of 21) -52237 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr12-2651 chr12 5945134 5945344 + 9.19 0.000 promoter-TSS (NM_001364791) promoter-TSS (NM_001364791) 20 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr1-9212 chr1 22365651 22365861 + 9.19 0.000 Intergenic THE1C|LTR|ERVL-MaLR -86095 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr19-4896 chr19 41021688 41021898 + 9.19 0.000 Intergenic THE1B|LTR|ERVL-MaLR 30511 NM_000767 1555 Hs.1360 NM_000767 ENSG00000197408 CYP2B6 CPB6|CYP2B|CYP2B7|CYP2B7P|CYPIIB6|EFVM|IIB1|P450 cytochrome P450 family 2 subfamily B member 6 protein-coding chr20-1256 chr20 38460551 38460761 + 9.19 0.000 Intergenic Intergenic 11287 NR_002986 677837 Hs.16936 NR_002986 ENSG00000199266 SNORA60 ACA60 small nucleolar RNA, H/ACA box 60 snoRNA chr2-7037 chr2 155309510 155309720 + 9.19 0.000 Intergenic L3|LINE|CR1 610920 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr3-6156 chr3 57544265 57544475 + 9.19 0.000 promoter-TSS (NM_001366028) promoter-TSS (NM_001366028) -26 NM_198564 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr4-8252 chr4 139653499 139653709 + 9.19 0.000 Intergenic LTR16D|LTR|ERVL -12164 NM_001204367 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr10-7293 chr10 131372788 131372998 + 9.19 0.000 Intergenic Intergenic -61172 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr17-7009 chr17 52280058 52280268 + 9.19 0.000 Intergenic L1MD3|LINE|L1 -110359 NR_146898 105371830 NR_146898 ENSG00000263317 LINC01982 - long intergenic non-protein coding RNA 1982 ncRNA chr10-6698 chr10 120758478 120758688 + 9.19 0.000 Intergenic MIRb|SINE|MIR 92596 NR_033850 283089 Hs.568750 NR_033850 ENSG00000227165 WDR11-AS1 - WDR11 antisense RNA 1 ncRNA chr15-4430 chr15 45101432 45101642 + 9.19 0.000 intron (NM_014080, intron 21 of 33) MER91A|DNA|hAT-Tip100 12624 NM_014080 50506 Hs.71377 NM_014080 ENSG00000140279 DUOX2 LNOX2|NOXEF2|P138-TOX|TDH6|THOX2 dual oxidase 2 protein-coding chr3-8290 chr3 57291105 57291315 + 9.19 0.000 intron (NM_001142733, intron 2 of 10) MamRep1151|LTR?|LTR? 1475 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chrX-2470 chrX 85662731 85662941 + 9.19 0.000 Intergenic L1PA7|LINE|L1 -172944 NR_031710 100302171 NR_031710 ENSG00000283435 MIR1321 MIRN1321|hsa-mir-1321 microRNA 1321 ncRNA chr1-4796 chr1 19065187 19065397 + 9.19 0.000 Intergenic Intergenic -108616 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr4-3464 chr4 110508937 110509147 + 9.19 0.000 intron (NM_001977, intron 4 of 19) intron (NM_001977, intron 4 of 19) 32887 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr1-5401 chr1 10151069 10151279 + 9.19 0.000 intron (NM_006048, intron 19 of 26) AluY|SINE|Alu -59396 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr1-7430 chr1 43534532 43534742 + 9.19 0.000 intron (NM_002840, intron 1 of 33) L2|LINE|L2 3754 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr1-7987 chr1 205453081 205453291 + 9.19 0.000 intron (NR_103783, intron 1 of 1) intron (NR_103783, intron 1 of 1) -2872 NR_148934 284577 Hs.434167 NR_148934 ENSG00000224717 LEMD1-DT - LEMD1 divergent transcript ncRNA chr3-10901 chr3 171349520 171349730 + 9.19 0.000 intron (NR_027767, intron 2 of 2) intron (NR_027767, intron 2 of 2) 110780 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr15-4382 chr15 42596468 42596678 + 9.19 0.000 intron (NM_020759, intron 3 of 32) intron (NM_020759, intron 3 of 32) 20967 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr2-10571 chr2 240686186 240686396 + 9.19 0.000 promoter-TSS (NR_149021) promoter-TSS (NR_149021) -43 NR_149021 285191 Hs.729906 NR_149021 LOC285191 - uncharacterized LOC285191 ncRNA chr14-3301 chr14 85182697 85182907 + 9.19 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -89130 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr5-4372 chr5 172411536 172411746 + 9.19 0.000 intron (NM_001017995, intron 2 of 12) intron (NM_001017995, intron 2 of 12) 42882 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr15-2781 chr15 33776935 33777145 + 9.19 0.000 intron (NM_001243996, intron 64 of 102) AluJr|SINE|Alu -191457 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr7-6039 chr7 109543814 109544024 + 9.19 0.000 Intergenic L1M4a1|LINE|L1 416294 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr6-1195 chr6 2999777 2999987 + 9.19 0.000 promoter-TSS (NM_001290222) promoter-TSS (NM_001290222) -12 NM_000904 4835 Hs.533050 NM_000904 ENSG00000124588 NQO2 DHQV|DIA6|NMOR2|QR2 N-ribosyldihydronicotinamide:quinone reductase 2 protein-coding chr1-5254 chr1 203200107 203200317 + 9.19 0.000 Intergenic MIRb|SINE|MIR -13508 NM_001276 1116 Hs.382202 NM_001276 ENSG00000133048 CHI3L1 ASRT7|CGP-39|GP-39|GP39|HC-gp39|HCGP-3P|YK-40|YKL-40|YKL40|YYL-40|hCGP-39 chitinase 3 like 1 protein-coding GL000224.1-3 GL000224.1 4350 4560 + 9.19 0.000 NA NA NA NA chr3-10903 chr3 171447465 171447675 + 9.19 0.000 intron (NM_001161563, intron 1 of 31) MIRb|SINE|MIR 12835 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr14-2716 chr14 90846537 90846747 + 9.19 0.000 Intergenic MIRb|SINE|MIR -30212 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr1-8139 chr1 11621935 11622145 + 9.19 0.000 Intergenic MIRc|SINE|MIR 12509 NR_104624 101929181 Hs.568616 NR_104624 ENSG00000235643 LINC01647 - long intergenic non-protein coding RNA 1647 ncRNA chr11-3941 chr11 378002 378212 + 9.19 0.000 intron (NM_178537, intron 14 of 19) intron (NM_178537, intron 14 of 19) 8608 NM_178537 338707 Hs.148074 NM_178537 ENSG00000182272 B4GALNT4 - beta-1,4-N-acetyl-galactosaminyltransferase 4 protein-coding chr8-6346 chr8 52119861 52120071 + 9.19 0.000 intron (NM_014682, intron 23 of 25) L3|LINE|CR1 -74396 NR_134310 101929341 Hs.147170 NR_134310 ENSG00000253551 LOC101929341 - uncharacterized LOC101929341 ncRNA chr4-4815 chr4 107442682 107442892 + 9.19 0.000 Intergenic Intergenic 277447 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr8-3322 chr8 30931096 30931306 + 9.19 0.000 Intergenic L1M3de|LINE|L1 -18193 NM_001350162 56154 Hs.458316 NM_001350162 ENSG00000133863 TEX15 CT42|SPGF25 testis expressed 15, meiosis and synapsis associated protein-coding chr17-7415 chr17 9839299 9839509 + 9.19 0.000 intron (NM_004246, intron 3 of 12) (CTC)n|Simple_repeat|Simple_repeat 13480 NM_004246 9340 Hs.248202 NM_004246 ENSG00000065325 GLP2R - glucagon like peptide 2 receptor protein-coding chr4-7515 chr4 74892665 74892875 + 9.19 0.000 Intergenic Intergenic -40346 NM_015393 25849 Hs.105460 NM_015393 ENSG00000169116 PARM1 Cipar1|DKFZP564O0823|PARM-1|WSC4 prostate androgen-regulated mucin-like protein 1 protein-coding chr14-1390 chr14 51293437 51293647 + 9.19 0.000 Intergenic Intergenic 34843 NR_145423 161342 NR_145423 ENSG00000258955 LINC00519 C14orf30|c14_5317 long intergenic non-protein coding RNA 519 ncRNA chr13-1435 chr13 49848078 49848288 + 9.19 0.000 Intergenic Intergenic -42226 NR_003268 220429 Hs.448219 NR_003268 ENSG00000181358 CTAGE10P - CTAGE family member 10, pseudogene pseudo chr10-6715 chr10 125295857 125296067 + 9.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR -134932 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr15-3525 chr15 99919349 99919559 + 9.19 0.000 Intergenic Intergenic 112431 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr1-11079 chr1 228029321 228029531 + 9.19 0.000 intron (NM_033131, intron 2 of 3) intron (NM_033131, intron 2 of 3) 22428 NM_033131 89780 Hs.336930 NM_033131 ENSG00000154342 WNT3A - Wnt family member 3A protein-coding chr3-8304 chr3 61395419 61395629 + 9.19 0.000 Intergenic L1PA4|LINE|L1 -144063 NR_148921 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr13-4122 chr13 81557830 81558040 + 9.19 0.000 Intergenic Intergenic -330952 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr1-11189 chr1 241518953 241519163 + 9.19 0.000 intron (NM_000143, intron 1 of 9) intron (NM_000143, intron 1 of 9) 727 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1 fumarate hydratase protein-coding chr7-4614 chr7 23501740 23501950 + 9.19 0.000 Intergenic Intergenic 11457 NR_026676 256355 Hs.367935 NR_026676 ENSG00000232818 RPS2P32 RPS2_14_794 ribosomal protein S2 pseudogene 32 pseudo chrX-2213 chrX 41716776 41716986 + 9.19 0.000 intron (NM_003688, intron 5 of 26) LTR10B|LTR|ERV1 -7300 NM_080817 27197 Hs.567457 NM_080817 ENSG00000171657 GPR82 - G protein-coupled receptor 82 protein-coding chr11-8370 chr11 84401510 84401720 + 9.19 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) -84276 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr7-6341 chr7 147751686 147751896 + 9.19 0.000 intron (NM_014141, intron 12 of 22) intron (NM_014141, intron 12 of 22) 80112 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr3-4713 chr3 57488640 57488850 + 9.19 0.000 intron (NM_001366028, intron 12 of 73) intron (NM_001366028, intron 12 of 73) 55599 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr18-2239 chr18 69534670 69534880 + 9.19 0.000 intron (NM_152721, intron 1 of 7) L1M5|LINE|L1 64844 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr17-3176 chr17 77806051 77806261 + 9.19 0.000 Intergenic AluSz6|SINE|Alu -77597 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr2-7924 chr2 59241357 59241567 + 9.19 0.000 intron (NR_110219, intron 1 of 2) intron (NR_110219, intron 1 of 2) 23754 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr4-4037 chr4 2782557 2782767 + 9.19 0.000 Intergenic L1PBa|LINE|L1 -10423 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr3-4434 chr3 18703957 18704167 + 9.19 0.000 Intergenic L1MA2|LINE|L1 -258470 NM_001322872 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr6-3716 chr6 1317955 1318165 + 9.19 0.000 Intergenic Intergenic 5962 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chrX-707 chrX 95085913 95086123 + 9.19 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -22792 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr7-5416 chr7 35307229 35307439 + 9.19 0.000 Intergenic Intergenic -6521 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr2-12462 chr2 60313037 60313247 + 9.19 0.000 Intergenic Intergenic 69894 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr2-5431 chr2 119232146 119232356 + 9.19 0.000 intron (NM_182915, intron 2 of 5) intron (NM_182915, intron 2 of 5) 8417 NM_018234 55240 Hs.647822 NM_018234 ENSG00000115107 STEAP3 AHMIO2|STMP3|TSAP6|dudlin-2|dudulin-2|pHyde STEAP3 metalloreductase protein-coding chr15-3479 chr15 95196128 95196338 + 9.19 0.000 Intergenic Intergenic 130867 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr15-948 chr15 33064992 33065202 + 9.19 0.000 intron (NM_001277313, intron 5 of 20) intron (NM_001277313, intron 5 of 20) 3077 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr21-1085 chr21 32956374 32956584 + 9.19 0.000 Intergenic Intergenic -2409 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA chr2-8483 chr2 126895441 126895651 + 9.19 0.000 Intergenic Intergenic -3344 NM_001322244 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr6-3982 chr6 110682296 110682506 + 9.19 0.000 intron (NM_001300963, intron 3 of 13) intron (NM_001300963, intron 3 of 13) -132220 NM_001287215 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr2-8435 chr2 119991658 119991868 + 9.19 0.000 Intergenic L1MA9|LINE|L1 -21314 NM_001330310 57669 Hs.369232 NM_020909 ENSG00000115109 EPB41L5 BE37|YMO1|YRT erythrocyte membrane protein band 4.1 like 5 protein-coding chrX-1800 chrX 86951373 86951583 + 9.19 0.000 Intergenic MER41A|LTR|ERV1 -566324 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr3-3626 chr3 106473750 106473960 + 9.19 0.000 Intergenic L1MA9|LINE|L1 -604454 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr15-3002 chr15 55289001 55289211 + 9.19 0.000 intron (NM_183235, intron 1 of 6) intron (NM_183235, intron 1 of 6) 707 NM_183235 5873 Hs.654978 NM_004580 ENSG00000069974 RAB27A GS2|HsT18676|RAB27|RAM RAB27A, member RAS oncogene family protein-coding chr12-6297 chr12 50891651 50891861 + 9.19 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -33259 NM_014033 25840 Hs.711113 NM_014033 ENSG00000185432 METTL7A AAM-B|AAMB methyltransferase like 7A protein-coding chr11-10101 chr11 86540182 86540392 + 9.19 0.000 intron (NM_001014811, intron 3 of 13) LTR32|LTR|ERVL 131911 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr4-6987 chr4 22512456 22512666 + 9.19 0.000 intron (NM_145290, intron 1 of 18) MLT1C|LTR|ERVL-MaLR -2751 NR_162129 113219450 NR_162129 MIR12115 - microRNA 12115 ncRNA chr3-6380 chr3 89096608 89096818 + 9.19 0.000 Intergenic L1MC1|LINE|L1 -10908 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chrX-2004 chrX 14063493 14063703 + 9.19 0.000 Intergenic MIRb|SINE|MIR -33706 NM_001042480 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chr6-5535 chr6 168065766 168065976 + 9.19 0.000 intron (NM_024919, intron 4 of 10) intron (NM_024919, intron 4 of 10) 9964 NM_001122841 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr1-7078 chr1 185632775 185632985 + 9.19 0.000 Intergenic LTR51|LTR|ERV1 -4392 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chrX-3231 chrX 65635485 65635695 + 9.19 0.000 Intergenic Intergenic -32064 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr1-15082 chr1 97388640 97388850 + 9.19 0.000 intron (NM_000110, intron 14 of 22) L2a|LINE|L2 292822 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr3-5741 chr3 19873588 19873798 + 9.19 0.000 Intergenic HERV17-int|LTR|ERV1 60524 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding chr6-3358 chr6 34536653 34536863 + 9.19 0.000 Intergenic Intergenic 19571 NM_012391 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr7-7366 chr7 57338460 57338670 + 9.19 0.000 Intergenic Intergenic -66202 NR_120505 100653233 Hs.127379 NR_120505 ENSG00000260653 LOC100653233 - uncharacterized LOC100653233 ncRNA chr22-390 chr22 29072832 29073042 + 9.19 0.000 promoter-TSS (NM_032045) promoter-TSS (NM_032045) -98 NM_001039570 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 ECTD13|KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chrX-3374 chrX 150272139 150272349 + 9.19 0.000 Intergenic L2|LINE|L2 44240 NR_031748 100313839 NR_031748 ENSG00000252454 MIR2114 - microRNA 2114 ncRNA chr8-3969 chr8 50276748 50276958 + 9.19 0.000 intron (NR_135797, intron 2 of 20) AluY|SINE|Alu 112722 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr3-9873 chr3 81295976 81296186 + 9.19 0.000 Intergenic LTR33C|LTR|ERVL 302213 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr9-5386 chr9 92698793 92699003 + 9.19 0.000 Intergenic L1PA13|LINE|L1 -28767 NM_022755 64768 Hs.459896 NM_022755 ENSG00000127080 IPPK C9orf12|INSP5K2|IP5K|IPK1|bA476B13.1 inositol-pentakisphosphate 2-kinase protein-coding chr2-12954 chr2 102651187 102651397 + 9.19 0.000 intron (NM_003048, intron 1 of 11) L2a|LINE|L2 31739 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr9-3186 chr9 127785529 127785739 + 9.19 0.000 promoter-TSS (NR_036055) promoter-TSS (NR_036055) -199 NR_039767 100616250 NR_039767 ENSG00000283863 MIR3960 - microRNA 3960 ncRNA chr10-4347 chr10 31173907 31174117 + 9.19 0.000 Intergenic X6A_LINE|LINE|CR1 -13871 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr10-1682 chr10 132364523 132364733 + 9.19 0.000 intron (NM_001143757, intron 9 of 10) (CACTCA)n|Simple_repeat|Simple_repeat 27288 NM_001309474 80313 Hs.119897 NM_030626 ENSG00000148814 LRRC27 - leucine rich repeat containing 27 protein-coding chr4-2671 chr4 1055754 1055964 + 9.19 0.000 TTS (NM_001366919) TTS (NM_001366919) 43395 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chrX-5244 chrX 137280405 137280615 + 9.19 0.000 Intergenic MIR|SINE|MIR -248836 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr1-9125 chr1 18205608 18205818 + 9.19 0.000 intron (NM_032880, intron 1 of 9) intron (NM_032880, intron 1 of 9) 97915 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr3-9231 chr3 38197042 38197252 + 9.19 0.000 intron (NM_005109, intron 3 of 17) intron (NM_005109, intron 3 of 17) 31610 NM_005109 9943 Hs.475970 NM_005109 ENSG00000172939 OXSR1 OSR1 oxidative stress responsive kinase 1 protein-coding chr17-6283 chr17 43374903 43375113 + 9.19 0.000 TTS (NR_027413) TTS (NR_027413) 13890 NR_027413 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chrX-1794 chrX 84286205 84286415 + 9.19 0.000 Intergenic L1PA16|LINE|L1 -60482 NR_031690 100302191 NR_031690 ENSG00000221494 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA chrX-3605 chrX 82813672 82813882 + 9.19 0.000 Intergenic Intergenic -694513 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr16-5669 chr16 69396820 69397030 + 9.19 0.000 Intergenic Intergenic -10918 NM_005652 7014 Hs.63335 NM_005652 ENSG00000132604 TERF2 TRBF2|TRF2 telomeric repeat binding factor 2 protein-coding chr20-3638 chr20 9195894 9196104 + 9.19 0.000 intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) -21391 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr4-4106 chr4 6300494 6300704 + 9.19 0.000 intron (NM_006005, intron 7 of 7) intron (NM_006005, intron 7 of 7) 30749 NM_006005 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr16-4202 chr16 11783688 11783898 + 9.19 0.000 intron (NM_014153, intron 1 of 22) intron (NM_014153, intron 1 of 22) 13465 NM_014153 29066 Hs.371856 NM_014153 ENSG00000122299 ZC3H7A HSPC055|ZC3H7|ZC3HDC7 zinc finger CCCH-type containing 7A protein-coding chr19-2082 chr19 41379673 41379883 + 9.19 0.000 intron (NM_001369862, intron 2 of 4) MLT1G|LTR|ERVL-MaLR 2514 NM_001042595 641649 Hs.709417 NM_001042595 ENSG00000142046 TMEM91 DSPC3|IFITMD6 transmembrane protein 91 protein-coding chr2-4043 chr2 110811774 110811984 + 9.19 0.000 intron (NM_001371254, intron 9 of 18) intron (NM_001371254, intron 9 of 18) 79306 NM_001371254 chr11-2663 chr11 64622092 64622302 + 9.19 0.000 intron (NM_015080, intron 21 of 22) intron (NM_015080, intron 21 of 22) 21348 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr7-5682 chr7 66552577 66552787 + 9.19 0.000 TTS (NR_111972) TTS (NR_111972) 39725 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr4-8151 chr4 128715739 128715949 + 9.19 0.000 Intergenic MIR3|SINE|MIR -93856 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr2-9137 chr2 209715798 209716008 + 9.19 0.000 intron (NM_001363910, intron 13 of 15) L2c|LINE|L2 -55929 NM_182587 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr15-2088 chr15 64735741 64735951 + 9.19 0.000 Intergenic Intergenic 25371 NR_138364 348093 Hs.436518 NM_194272 ENSG00000166831 RBPMS2 - RNA binding protein, mRNA processing factor 2 protein-coding chr7-9650 chr7 151271754 151271964 + 9.19 0.000 intron (NM_003078, intron 2 of 13) AluJo|SINE|Alu 4875 NM_001003802 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr3-9978 chr3 98087192 98087402 + 9.19 0.000 exon (NM_054106, exon 1 of 1) exon (NM_054106, exon 1 of 1) 124 NM_054106 81050 Hs.554715 NM_054106 ENSG00000196578 OR5AC2 HSA1 olfactory receptor family 5 subfamily AC member 2 protein-coding chr13-2090 chr13 75356586 75356796 + 9.19 0.000 intron (NM_001286658, intron 3 of 19) intron (NM_001286658, intron 3 of 19) 116103 NR_132375 106144536 Hs.591226 NR_132375 LINC01078 - long intergenic non-protein coding RNA 1078 ncRNA chr18-1268 chr18 58251504 58251714 + 9.19 0.000 intron (NM_001144965, intron 4 of 30) intron (NM_001144965, intron 4 of 30) 30038 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr3-3129 chr3 154003433 154003643 + 9.19 0.000 Intergenic Intergenic -117465 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr4-3034 chr4 135050263 135050473 + 9.19 0.000 Intergenic Intergenic 73191 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr7-2976 chr7 2281997 2282207 + 9.19 0.000 intron (NM_013321, intron 1 of 10) intron (NM_013321, intron 1 of 10) -24525 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr21-1295 chr21 43363688 43363898 + 9.19 0.000 Intergenic Intergenic -1444 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr5-3059 chr5 31892708 31892918 + 9.19 0.000 intron (NM_178140, intron 2 of 24) AluJb|SINE|Alu 43346 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr13-2208 chr13 21965167 21965377 + 9.19 0.000 Intergenic Intergenic -87112 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr16-4409 chr16 50809075 50809285 + 9.19 0.000 Intergenic Intergenic 2508 NR_146573 105371252 NR_146573 ENSG00000261703 LINC02168 - long intergenic non-protein coding RNA 2168 ncRNA chr11-4409 chr11 83480270 83480480 + 9.19 0.000 intron (NM_001142699, intron 22 of 27) intron (NM_001142699, intron 22 of 27) -193968 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr7-3531 chr7 7190202 7190412 + 9.19 0.000 intron (NM_020156, intron 1 of 3) LTR65|LTR|ERV1 7692 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr20-1861 chr20 33286336 33286546 + 9.19 0.000 intron (NM_033197, intron 2 of 15) intron (NM_033197, intron 2 of 15) 3227 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr12-2083 chr12 9869515 9869725 + 9.19 0.000 5' UTR (NM_005127, exon 1 of 5) 5' UTR (NM_005127, exon 1 of 5) 239 NM_005127 9976 Hs.85201 NM_005127 ENSG00000110852 CLEC2B AICL|CLECSF2|HP10085|IFNRG1 C-type lectin domain family 2 member B protein-coding chr4-4030 chr4 2166673 2166883 + 9.19 0.000 intron (NM_181808, intron 13 of 25) MLT2B3|LTR|ERVL 75343 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chrX-959 chrX 102133367 102133577 + 9.19 0.000 Intergenic L1MEg|LINE|L1 7793 NM_080390 140597 Hs.401835 NM_080390 ENSG00000184905 TCEAL2 MY0876G05|WEX1|my048 transcription elongation factor A like 2 protein-coding chr5-3447 chr5 159281498 159281708 + 9.19 0.000 intron (NM_145049, intron 9 of 10) intron (NM_145049, intron 9 of 10) 18313 NM_145049 134510 Hs.591733 NM_145049 ENSG00000164332 UBLCP1 CPUB1 ubiquitin like domain containing CTD phosphatase 1 protein-coding chr21-666 chr21 43813477 43813687 + 9.19 0.000 Intergenic Intergenic -1015 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chr10-4275 chr10 5652186 5652396 + 9.19 0.000 intron (NR_037164, intron 2 of 6) intron (NR_037164, intron 2 of 6) 14304 NR_037164 79754 Hs.445899 NM_024701 ENSG00000196372 ASB13 - ankyrin repeat and SOCS box containing 13 protein-coding chr7-4419 chr7 103348475 103348685 + 9.19 0.000 intron (NM_001204453, intron 1 of 4) intron (NM_001204453, intron 1 of 4) 937 NM_002803 5701 Hs.437366 NM_002803 ENSG00000161057 PSMC2 MSS1|Nbla10058|S7 proteasome 26S subunit, ATPase 2 protein-coding chr2-7026 chr2 151437576 151437786 + 9.19 0.000 intron (NM_001177665, intron 12 of 33) AluSz6|SINE|Alu 27779 NM_018151 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding chr6-6889 chr6 12014018 12014228 + 9.19 0.000 intron (NM_002114, intron 1 of 8) MIRb|SINE|MIR 1811 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chrX-2132 chrX 31931390 31931600 + 9.19 0.000 intron (NM_000109, intron 46 of 78) intron (NM_000109, intron 46 of 78) 223974 NM_004013 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr2-2823 chr2 84895141 84895351 + 9.19 0.000 Intergenic Intergenic -10410 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr1-12240 chr1 215964802 215965012 + 9.19 0.000 intron (NM_206933, intron 37 of 71) intron (NM_206933, intron 37 of 71) -107558 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr19-4765 chr19 30374292 30374502 + 9.19 0.000 intron (NM_014717, intron 1 of 4) intron (NM_014717, intron 1 of 4) 2013 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr5-8886 chr5 155291353 155291563 + 9.19 0.000 Intergenic MIR|SINE|MIR 277703 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr11-5755 chr11 3221805 3222015 + 9.19 0.000 non-coding (NR_027138, exon 2 of 2) non-coding (NR_027138, exon 2 of 2) -3097 NM_001164377 386746 Hs.730306 NM_001164377 ENSG00000182170 MRGPRG GPR169|MRGG MAS related GPR family member G protein-coding chr3-5913 chr3 41154205 41154415 + 9.19 0.000 Intergenic Intergenic -45195 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr19-2092 chr19 49580347 49580557 + 9.19 0.000 promoter-TSS (NM_001316335) promoter-TSS (NM_001316335) 104 NM_001363649 51070 Hs.7236 NM_015953 ENSG00000142546 NOSIP CGI-25 nitric oxide synthase interacting protein protein-coding chr10-2050 chr10 89392467 89392677 + 9.19 0.000 promoter-TSS (NM_001270930) promoter-TSS (NM_001270930) 26 NM_001270930 3434 Hs.20315 NM_001548 ENSG00000185745 IFIT1 C56|G10P1|IFI-56|IFI-56K|IFI56|IFIT-1|IFNAI1|ISG56|P56|RNM561 interferon induced protein with tetratricopeptide repeats 1 protein-coding chr7-4433 chr7 115352482 115352692 + 9.19 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -121232 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr2-5616 chr2 187339536 187339746 + 9.19 0.000 Intergenic LTR37-int|LTR|ERV1 108611 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr4-2829 chr4 42893241 42893451 + 9.19 0.000 promoter-TSS (NM_001080476) promoter-TSS (NM_001080476) 80 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr3-3931 chr3 49654421 49654631 + 9.19 0.000 exon (NM_003458, exon 5 of 12) exon (NM_003458, exon 5 of 12) -19825 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr9-4655 chr9 115944708 115944918 + 9.19 0.000 Intergenic Intergenic -19606 NR_024032 58483 Hs.23367 NR_024032 ENSG00000204148 LINC00474 C9orf27|EST-YD1 long intergenic non-protein coding RNA 474 ncRNA chr2-3797 chr2 19674538 19674748 + 9.19 0.000 Intergenic Intergenic -194211 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr7-2633 chr7 1782637 1782847 + 9.19 0.000 Intergenic L1ME3E|LINE|L1 -40432 NR_120508 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr14-2575 chr14 39097092 39097302 + 9.19 0.000 intron (NM_006364, intron 1 of 19) intron (NM_006364, intron 1 of 19) -5943 NR_146545 105370458 NR_146545 ENSG00000258651 SEC23A-AS1 - SEC23A antisense RNA 1 ncRNA chr6-4617 chr6 46058761 46058971 + 9.19 0.000 intron (NM_001370649, intron 1 of 5) intron (NM_001370649, intron 1 of 5) 21482 NM_001114086 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr3-3183 chr3 184250270 184250480 + 9.19 0.000 promoter-TSS (NM_001006941) promoter-TSS (NM_001006941) 703 NM_014693 110599583 Hs.146161 NM_014693 ENSG00000284917 EEF1AKMT4-ECE2 ECE-2|ECE2 EEF1AKMT4-ECE2 readthrough protein-coding chr12-6170 chr12 13172802 13173012 + 9.19 0.000 Intergenic Intergenic -23819 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr8-3273 chr8 18012222 18012432 + 9.19 0.000 intron (NM_001352642, intron 35 of 37) MER44B|DNA|TcMar-Tigger 70869 NM_001363743 427 Hs.527412 NM_004315 ENSG00000104763 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase 1 protein-coding chr9-6013 chr9 135414272 135414482 + 9.19 0.000 Intergenic L1MB5|LINE|L1 57872 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr14-1300 chr14 23364147 23364357 + 9.19 0.000 intron (NM_005864, intron 1 of 5) intron (NM_005864, intron 1 of 5) 920 NM_005864 10278 Hs.24587 NM_005864 ENSG00000100842 EFS CAS3|CASS3|EFS1|EFS2|HEFS|SIN embryonal Fyn-associated substrate protein-coding chr16-2918 chr16 1505338 1505548 + 9.19 0.000 exon (NM_016111, exon 16 of 21) exon (NM_016111, exon 16 of 21) 12083 NM_001351846 9894 Hs.271044 NM_016111 ENSG00000100726 TELO2 CLK2|TEL2|YHFS telomere maintenance 2 protein-coding chr14-2594 chr14 52889526 52889736 + 9.19 0.000 intron (NM_006832, intron 4 of 14) Tigger3a|DNA|TcMar-Tigger 61419 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr4-1890 chr4 8283629 8283839 + 9.19 0.000 intron (NM_053044, intron 2 of 8) intron (NM_053044, intron 2 of 8) 13980 NM_001297559 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr19-2341 chr19 45444427 45444637 + 9.19 0.000 intron (NM_001369412, intron 1 of 9) CpG 6234 NM_001369417 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr1-12525 chr1 25032328 25032538 + 9.19 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger 8930 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr11-6198 chr11 45733664 45733874 + 9.19 0.000 Intergenic L2c|LINE|L2 11461 NR_047569 100507384 Hs.259426 NR_047569 ENSG00000254519 LOC100507384 - uncharacterized LOC100507384 ncRNA chr8-5161 chr8 88683761 88683971 + 9.19 0.000 Intergenic L1MA4|LINE|L1 -356383 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr12-5496 chr12 125957047 125957257 + 9.19 0.000 Intergenic AluJr|SINE|Alu 26222 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr2-7834 chr2 46862075 46862285 + 9.19 0.000 Intergenic Intergenic 34316 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA chr15-1592 chr15 76565587 76565797 + 9.19 0.000 intron (NR_148227, intron 23 of 32) L1ME2|LINE|L1 -20955 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chrX-2166 chrX 38469892 38470102 + 9.19 0.000 Intergenic Intergenic -91481 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr2-12920 chr2 100752747 100752957 + 9.19 0.000 Intergenic Intergenic -67287 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr5-4258 chr5 138499664 138499874 + 9.19 0.000 Intergenic Intergenic 34290 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr7-6165 chr7 128041159 128041369 + 9.19 0.000 intron (NM_014390, intron 16 of 23) FLAM_C|SINE|Alu -9827 NM_022143 64101 Hs.655003 NM_022143 ENSG00000128594 LRRC4 NAG14|NGL-2 leucine rich repeat containing 4 protein-coding chr15-3699 chr15 42622188 42622398 + 9.19 0.000 intron (NM_020759, intron 3 of 32) intron (NM_020759, intron 3 of 32) 46687 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr4-2740 chr4 7745913 7746123 + 9.19 0.000 Intergenic Intergenic -8072 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr4-5212 chr4 165735419 165735629 + 9.19 0.000 intron (NR_121677, intron 2 of 3) intron (NR_121677, intron 2 of 3) 7547 NR_121677 101928131 Hs.406479 NR_121677 LOC101928131 - uncharacterized LOC101928131 ncRNA chr16-6703 chr16 71125826 71126036 + 9.19 0.000 intron (NM_017558, intron 9 of 19) intron (NM_017558, intron 9 of 19) 104791 NM_001270974 54768 Hs.351914 NM_017558 ENSG00000157423 HYDIN CILD5|HYDIN1|HYDIN2|PPP1R31 HYDIN axonemal central pair apparatus protein protein-coding chr1-8570 chr1 171667638 171667848 + 9.19 0.000 Intergenic Intergenic -15055 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr5-5353 chr5 131958193 131958403 + 9.19 0.000 intron (NM_015256, intron 20 of 20) intron (NM_015256, intron 20 of 20) -12635 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chr11-3826 chr11 68051959 68052169 + 9.19 0.000 TTS (NM_212469) TTS (NM_212469) 7270 NR_106811 102465451 NR_106811 ENSG00000275022 MIR6753 hsa-mir-6753 microRNA 6753 ncRNA chr6-1738 chr6 43635607 43635817 + 9.19 0.000 promoter-TSS (NM_014628) promoter-TSS (NM_014628) -128 NM_014628 9587 Hs.122346 NM_014628 ENSG00000124688 MAD2L1BP CMT2 MAD2L1 binding protein protein-coding chr11-6250 chr11 56935781 56935991 + 9.19 0.000 Intergenic L1PA3|LINE|L1 -53028 NM_001005323 390181 Hs.554520 NM_001005323 ENSG00000181273 OR5AK2 - olfactory receptor family 5 subfamily AK member 2 protein-coding chr6-5266 chr6 137594378 137594588 + 9.19 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -71163 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr5-6942 chr5 138986357 138986567 + 9.19 0.000 intron (NM_022464, intron 7 of 9) intron (NM_022464, intron 7 of 9) 111062 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chrX-350 chrX 53320774 53320984 + 9.19 0.000 exon (NM_001111125, exon 1 of 15) exon (NM_001111125, exon 1 of 15) 471 NM_001111125 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr14-5201 chr14 95365628 95365838 + 9.19 0.000 Intergenic Intergenic 36149 NR_110127 101929080 Hs.525567 NR_110127 ENSG00000258630 LINC02292 - long intergenic non-protein coding RNA 2292 ncRNA chr1-7899 chr1 154848233 154848443 + 9.19 0.000 intron (NM_001204087, intron 1 of 8) intron (NM_001204087, intron 1 of 8) 11538 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr2-3828 chr2 26771191 26771401 + 9.19 0.000 intron (NM_017877, intron 1 of 5) intron (NM_017877, intron 1 of 5) 7012 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr12-6764 chr12 7396271 7396481 + 9.19 0.000 exon (NM_174941, exon 8 of 20) exon (NM_174941, exon 8 of 20) 47809 NM_001297650 283316 Hs.631727 NM_174941 ENSG00000177675 CD163L1 CD163B|M160|SCARI2|WC1 CD163 molecule like 1 protein-coding chr4-2787 chr4 25249517 25249727 + 9.19 0.000 intron (NM_018323, intron 1 of 9) SVA_B|Retroposon|SVA 15589 NM_018323 55300 Hs.191701 NM_018323 ENSG00000038210 PI4K2B PI4KIIB|PIK42B phosphatidylinositol 4-kinase type 2 beta protein-coding chr7-2795 chr7 80897267 80897477 + 9.19 0.000 intron (NM_006379, intron 2 of 17) intron (NM_006379, intron 2 of 17) 21679 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr9-5054 chr9 32984465 32984675 + 9.19 0.000 intron (NR_160920, intron 5 of 6) intron (NR_160920, intron 5 of 6) 17006 NM_001195249 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr5-5855 chr5 181124950 181125160 + 9.19 0.000 exon (NM_001258283, exon 1 of 1) exon (NM_001258283, exon 1 of 1) 249 NM_001258283 26693 Hs.742585 NM_001258283 ENSG00000185372 OR2V1 OR2V1P|OST265 olfactory receptor family 2 subfamily V member 1 protein-coding chr4-3790 chr4 102190106 102190316 + 9.19 0.000 Intergenic Intergenic 134101 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr10-4701 chr10 133187988 133188198 + 9.19 0.000 intron (NM_152643, intron 6 of 29) L1MB3|LINE|L1 27874 NM_152643 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr5-7975 chr5 83030014 83030224 + 9.19 0.000 Intergenic L1M1|LINE|L1 34218 NR_003139 677765 Hs.693283 NR_003139 ENSG00000238835 SCARNA18 SCARNA18A|U109 small Cajal body-specific RNA 18 ncRNA chr7-5592 chr7 49286670 49286880 + 9.19 0.000 Intergenic Intergenic 362228 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr1-6882 chr1 117447791 117448001 + 9.19 0.000 intron (NM_006699, intron 6 of 12) L1P3|LINE|L1 80447 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr11-10245 chr11 101102459 101102669 + 9.19 0.000 intron (NM_000926, intron 2 of 7) intron (NM_000926, intron 2 of 7) 26499 NM_001271161 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr9-2640 chr9 27053877 27054087 + 9.19 0.000 intron (NM_025103, intron 16 of 19) (TA)n|Simple_repeat|Simple_repeat -48310 NM_022901 64922 Hs.128071 NM_022901 ENSG00000184434 LRRC19 - leucine rich repeat containing 19 protein-coding chr7-5475 chr7 41656383 41656593 + 9.19 0.000 Intergenic Intergenic -37431 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr1-7269 chr1 232856676 232856886 + 9.19 0.000 Intergenic Intergenic 51889 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr22-2991 chr22 50601981 50602191 + 9.19 0.000 intron (NM_012324, intron 2 of 11) intron (NM_012324, intron 2 of 11) 1293 NM_012324 23542 Hs.558180 NM_012324 ENSG00000008735 MAPK8IP2 IB-2|IB2|JIP2|PRKM8IPL mitogen-activated protein kinase 8 interacting protein 2 protein-coding chr2-5750 chr2 219297061 219297271 + 9.19 0.000 intron (NM_001199764, intron 14 of 22) intron (NM_001199764, intron 14 of 22) -2966 NR_029688 406944 NR_029688 ENSG00000207647 MIR153-1 MIRN153-1|mir-153-1 microRNA 153-1 ncRNA chr4-2270 chr4 182208163 182208373 + 9.19 0.000 Intergenic Intergenic -35134 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr9-3481 chr9 13267693 13267903 + 9.19 0.000 intron (NM_001330637, intron 1 of 46) intron (NM_001330637, intron 1 of 46) 11766 NM_001261406 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr1-9292 chr1 26045365 26045575 + 9.19 0.000 intron (NM_032513, intron 1 of 6) intron (NM_032513, intron 1 of 6) 648 NM_032513 7780 Hs.143545 NM_032513 ENSG00000158014 SLC30A2 PP12488|TNZD|ZNT2|ZnT-2 solute carrier family 30 member 2 protein-coding chr17-4078 chr17 79238353 79238563 + 9.19 0.000 intron (NM_001082575, intron 3 of 14) intron (NM_001082575, intron 3 of 14) 163521 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr1-8966 chr1 9506588 9506798 + 9.19 0.000 Intergenic Intergenic -32772 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr5-4517 chr5 14350834 14351044 + 9.19 0.000 intron (NM_007118, intron 11 of 56) MER1B|DNA|hAT-Charlie -113044 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr6-4275 chr6 11565445 11565655 + 9.19 0.000 intron (NM_001100829, intron 1 of 2) MIRb|SINE|MIR 27801 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr6-4140 chr6 166972749 166972959 + 9.19 0.000 Intergenic MER51-int|LTR|ERV1 -16304 NM_003730 8635 Hs.529989 NM_003730 ENSG00000026297 RNASET2 RNASE6PL|bA514O12.3 ribonuclease T2 protein-coding chr12-3972 chr12 14336549 14336759 + 9.19 0.000 Intergenic HERVL-int|LTR|ERVL -28978 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr12-7335 chr12 55353168 55353378 + 9.19 0.000 Intergenic Intergenic -11838 NM_001005497 390323 Hs.554554 NM_001005497 ENSG00000187857 OR6C75 - olfactory receptor family 6 subfamily C member 75 protein-coding chr5-8336 chr5 118475573 118475783 + 9.19 0.000 intron (NR_104610, intron 4 of 9) L1PA4|LINE|L1 86439 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chr9-8158 chr9 104586491 104586701 + 9.19 0.000 Intergenic Intergenic 12817 NM_001004482 138799 Hs.553598 NM_001004482 ENSG00000277556 OR13C5 OR9-11 olfactory receptor family 13 subfamily C member 5 protein-coding chr18-716 chr18 15027936 15028146 + 9.19 0.000 Intergenic Intergenic -57573 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr4-3845 chr4 126343641 126343851 + 9.19 0.000 Intergenic L2a|LINE|L2 836487 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr9-3391 chr9 129632454 129632664 + 9.19 0.000 intron (NM_001286799, intron 1 of 3) intron (NM_001286799, intron 1 of 3) 6115 NM_001286799 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr18-1290 chr18 61901445 61901655 + 9.19 0.000 Intergenic Intergenic -8543 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr13-2456 chr13 49657320 49657530 + 9.19 0.000 Intergenic L4_A_Mam|LINE|RTE-X 28918 NM_138450 115761 Hs.558599 NM_138450 ENSG00000152213 ARL11 ARLTS1 ADP ribosylation factor like GTPase 11 protein-coding chr4-3627 chr4 12720368 12720578 + 9.19 0.000 Intergenic Intergenic 497022 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr1-7286 chr1 240386283 240386493 + 9.19 0.000 intron (NM_020066, intron 14 of 17) intron (NM_020066, intron 14 of 17) 225767 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr10-3791 chr10 128015534 128015744 + 9.19 0.000 intron (NM_001323354, intron 1 of 19) AluY|SINE|Alu 17492 NM_001323354 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr1-10913 chr1 209042102 209042312 + 9.19 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 69753 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr18-1673 chr18 69148390 69148600 + 9.19 0.000 Intergenic Intergenic -252393 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr14-4204 chr14 91867413 91867623 + 9.19 0.000 promoter-TSS (NM_001128596) promoter-TSS (NM_001128596) 18 NM_001128596 123036 Hs.510262 NM_152332 ENSG00000165929 TC2N C14orf47|C2CD1|MTAC2D1|Tac2-N tandem C2 domains, nuclear protein-coding chr3-4277 chr3 152413188 152413398 + 9.19 0.000 intron (NM_001314057, intron 3 of 11) intron (NM_001314057, intron 3 of 11) -72303 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr4-5036 chr4 140851119 140851329 + 9.19 0.000 Intergenic Intergenic -94839 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr8-7045 chr8 113352015 113352225 + 9.19 0.000 intron (NM_001363185, intron 1 of 66) intron (NM_001363185, intron 1 of 66) 25032 NM_198124 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr13-2257 chr13 26910642 26910852 + 9.19 0.000 Intergenic Intergenic -149961 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr2-8025 chr2 70030808 70031018 + 9.19 0.000 intron (NR_033872, intron 7 of 10) L2c|LINE|L2 56102 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA chr3-3879 chr3 39498770 39498980 + 9.19 0.000 intron (NR_103506, intron 2 of 2) intron (NR_103506, intron 2 of 2) -3191 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr17-4831 chr17 58304160 58304370 + 9.19 0.000 intron (NM_024418, intron 30 of 30) intron (NM_024418, intron 30 of 30) -21185 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr1-8887 chr1 5585636 5585846 + 9.19 0.000 Intergenic MamRep605|LTR?|LTR? 277000 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chrX-5284 chrX 140871248 140871458 + 9.19 0.000 Intergenic L1PA16|LINE|L1 54878 NR_031725 100302169 NR_031725 ENSG00000221081 MIR320D2 MIR320D-2|MIRN320D2|hsa-mir-320d-2|mir-320d-2 microRNA 320d-2 ncRNA chr22-3732 chr22 25980846 25981056 + 9.19 0.000 intron (NM_001318245, intron 39 of 43) MLT1C|LTR|ERVL-MaLR -188511 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr16-2991 chr16 24696241 24696451 + 9.19 0.000 intron (NM_001351850, intron 2 of 23) AluY|SINE|Alu -25284 NR_122072 400511 Hs.592028 NR_122072 ENSG00000224310 LINC01567 LOCCS long intergenic non-protein coding RNA 1567 ncRNA chr4-7098 chr4 33249408 33249618 + 9.19 0.000 Intergenic Intergenic 790380 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr9-3548 chr9 37864497 37864707 + 9.19 0.000 3' UTR (NM_024345, exon 7 of 7) 3' UTR (NM_024345, exon 7 of 7) 39525 NM_033412 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr12-5250 chr12 109270174 109270384 + 9.19 0.000 Intergenic Intergenic 39005 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chrX-3872 chrX 3962525 3962735 + 9.19 0.000 Intergenic Intergenic -41888 NR_146579 729162 Hs.657302 NR_146578 FAM239B - zinc finger protein 839 pseudogene pseudo chr14-3265 chr14 79032354 79032564 + 9.19 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -167523 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr1-6606 chr1 39414260 39414470 + 9.19 0.000 exon (NM_015038, exon 1 of 1) exon (NM_015038, exon 1 of 1) 5292 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr2-3488 chr2 191316253 191316463 + 9.19 0.000 intron (NM_012223, intron 3 of 28) intron (NM_012223, intron 3 of 28) 70954 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr2-12150 chr2 38292401 38292611 + 9.19 0.000 Intergenic THE1C|LTR|ERVL-MaLR 84024 NM_001330459 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr12-1308 chr12 8032700 8032910 + 9.19 0.000 promoter-TSS (NM_018416) promoter-TSS (NM_018416) 89 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr2-2207 chr2 69643783 69643993 + 9.19 0.000 promoter-TSS (NM_014911) promoter-TSS (NM_014911) 80 NM_001320698 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr5-6054 chr5 179183417 179183627 + 9.19 0.000 intron (NM_014244, intron 4 of 21) intron (NM_014244, intron 4 of 21) 123149 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr6-4468 chr6 35811101 35811311 + 9.19 0.000 intron (NM_182548, intron 1 of 3) MLT1I|LTR|ERVL-MaLR 5854 NM_182548 222662 Hs.367947 NM_182548 ENSG00000197753 LHFPL5 DFNB67|TMHS|dJ510O8.8 LHFPL tetraspan subfamily member 5 protein-coding chr3-9646 chr3 60397192 60397402 + 9.19 0.000 intron (NM_001320900, intron 6 of 9) LTR16B|LTR|ERVL 220573 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr4-4910 chr4 122542187 122542397 + 9.19 0.000 Intergenic LTR1D1|LTR|ERV1 -76691 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr3-5447 chr3 178722356 178722566 + 9.19 0.000 intron (NM_001278911, intron 1 of 4) MSTD|LTR|ERVL-MaLR 137944 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr6-5023 chr6 110768221 110768431 + 9.19 0.000 intron (NM_001300964, intron 1 of 12) L1MC2|LINE|L1 -46295 NM_001287215 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr2-7110 chr2 179107782 179107992 + 9.19 0.000 3' UTR (NM_178123, exon 18 of 18) 3' UTR (NM_178123, exon 18 of 18) -57750 NM_173648 285025 Hs.324341 NM_173648 ENSG00000163492 CCDC141 CAMDI coiled-coil domain containing 141 protein-coding chr2-10550 chr2 237647941 237648151 + 9.19 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) 20459 NM_001137550 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr8-2483 chr8 142282077 142282287 + 9.19 0.000 intron (NM_001366901, intron 11 of 13) intron (NM_001366901, intron 11 of 13) 83826 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr14-5065 chr14 83637574 83637784 + 9.19 0.000 Intergenic L1MEg|LINE|L1 995047 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr1-11188 chr1 241483434 241483644 + 9.19 0.000 Intergenic Intergenic 36246 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1 fumarate hydratase protein-coding chr3-6271 chr3 71239930 71240140 + 9.19 0.000 intron (NR_146142, intron 5 of 19) intron (NR_146142, intron 5 of 19) 5042 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr18-1209 chr18 35524324 35524534 + 9.19 0.000 Intergenic Intergenic -26469 NM_194281 125476 Hs.464903 NM_194281 ENSG00000153391 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding chr2-12641 chr2 73612032 73612242 + 9.19 0.000 Intergenic LTR72|LTR|ERV1 30285 NM_003960 9027 Hs.14637 NM_003960 ENSG00000144035 NAT8 ATase2|CCNAT|CML1|GLA|Hcml1|TSC501|TSC510 N-acetyltransferase 8 (putative) protein-coding chr10-6747 chr10 132460908 132461118 + 9.19 0.000 Intergenic Intergenic 15824 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chrX-4151 chrX 30530726 30530936 + 9.19 0.000 Intergenic Intergenic 46935 NM_025159 80231 Hs.665009 NM_025159 ENSG00000120280 CXorf21 - chromosome X open reading frame 21 protein-coding chr13-1854 chr13 111420716 111420926 + 9.19 0.000 Intergenic Intergenic 100179 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr15-3025 chr15 57936494 57936704 + 9.19 0.000 Intergenic L1PREC2|LINE|L1 77424 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr16-4444 chr16 53714813 53715023 + 9.19 0.000 intron (NM_001363897, intron 1 of 7) intron (NM_001363897, intron 1 of 7) 10762 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr3-4782 chr3 117454180 117454390 + 9.19 0.000 Intergenic Intergenic 236640 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr1-9295 chr1 26180601 26180811 + 9.19 0.000 intron (NM_006314, intron 2 of 20) intron (NM_006314, intron 2 of 20) 3215 NM_001297647 10256 Hs.16232 NM_006314 ENSG00000142675 CNKSR1 CNK|CNK1 connector enhancer of kinase suppressor of Ras 1 protein-coding chr2-9824 chr2 149169832 149170042 + 9.19 0.000 intron (NM_001317002, intron 4 of 7) intron (NM_001317002, intron 4 of 7) 51763 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr13-4133 chr13 82663729 82663939 + 9.19 0.000 Intergenic Intergenic 1218559 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr20-1004 chr20 63410284 63410494 + 9.19 0.000 intron (NM_172107, intron 15 of 16) intron (NM_172107, intron 15 of 16) -48993 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr2-14224 chr2 209917601 209917811 + 9.19 0.000 intron (NM_032504, intron 30 of 63) intron (NM_032504, intron 30 of 63) -84859 NM_001278283 6120 Hs.282260 NM_006916 ENSG00000197713 RPE RPE2-1 ribulose-5-phosphate-3-epimerase protein-coding chr16-3865 chr16 68752737 68752947 + 9.19 0.000 intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) 15550 NM_004360 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr9-7117 chr9 130776125 130776335 + 9.19 0.000 intron (NM_007313, intron 1 of 10) intron (NM_007313, intron 1 of 10) -59024 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr4-3901 chr4 146823581 146823791 + 9.19 0.000 intron (NM_031956, intron 9 of 12) L1PA8A|LINE|L1 122178 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr11-8108 chr11 44519110 44519320 + 9.19 0.000 Intergenic MIRb|SINE|MIR -46448 NM_001024844 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr19-6826 chr19 42137741 42137951 + 9.19 0.000 TTS (NR_038332) TTS (NR_038332) -4333 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr14-4968 chr14 75226384 75226594 + 9.19 0.000 Intergenic L2b|LINE|L2 -49877 NM_006827 10972 Hs.74137 NM_006827 ENSG00000170348 TMED10 P24(DELTA)|S31I125|S31III125|TMP21|Tmp-21-I|p23|p24d1 transmembrane p24 trafficking protein 10 protein-coding chr4-7233 chr4 43797625 43797835 + 9.19 0.000 Intergenic L1M1|LINE|L1 -219131 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr16-4251 chr16 22298448 22298658 + 9.19 0.000 intron (NM_001258035, intron 1 of 19).2 MIR|SINE|MIR 1144 NM_001258036 55718 Hs.460298 NM_018119 ENSG00000058600 POLR3E RPC5|SIN RNA polymerase III subunit E protein-coding chr17-4655 chr17 17768742 17768952 + 9.19 0.000 intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) -2545 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr5-4413 chr5 288021 288231 + 9.19 0.000 intron (NM_001267557, intron 2 of 3) intron (NM_001267557, intron 2 of 3) -16050 NM_001242412 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr17-2106 chr17 1999553 1999763 + 9.19 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -18058 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr22-3674 chr22 23231477 23231687 + 9.19 0.000 intron (NM_004327, intron 1 of 22) intron (NM_004327, intron 1 of 22) -31185 NR_033408 26226 Hs.729589 NR_033408 ENSG00000230701 FBXW4P1 FBW3|FBXW3|SHFM3P1 F-box and WD repeat domain containing 4 pseudogene 1 pseudo chr6-5356 chr6 149288228 149288438 + 9.19 0.000 intron (NM_001292035, intron 2 of 6) intron (NM_001292035, intron 2 of 6) -29379 NM_001292034 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr6-1895 chr6 168733899 168734109 + 9.19 0.000 Intergenic Intergenic 230378 NR_136249 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr12-5135 chr12 98855983 98856193 + 9.19 0.000 intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) 38686 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr18-2063 chr18 47996266 47996476 + 9.19 0.000 Intergenic Intergenic -65225 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr15-5077 chr15 86419294 86419504 + 9.19 0.000 intron (NM_152336, intron 18 of 24) L1PA7|LINE|L1 -102431 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr8-4622 chr8 132468620 132468830 + 9.19 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 12370 NM_004519 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr2-3377 chr2 10387150 10387360 + 9.19 0.000 intron (NM_001258359, intron 1 of 4) intron (NM_001258359, intron 1 of 4) 18491 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr20-4001 chr20 36216522 36216732 + 9.19 0.000 intron (NM_001258330, intron 16 of 20) L2a|LINE|L2 -19790 NM_015511 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr8-5744 chr8 139684208 139684418 + 9.19 0.000 intron (NR_104210, intron 1 of 3) intron (NR_104210, intron 1 of 3) 18810 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr1-10949 chr1 212482869 212483079 + 9.19 0.000 Intergenic Intergenic 50054 NR_026598 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr22-2741 chr22 39578476 39578686 + 9.19 0.000 intron (NM_001003406, intron 1 of 35) intron (NM_001003406, intron 1 of 35) 7828 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr12-5227 chr12 107927186 107927396 + 9.19 0.000 Intergenic Intergenic -23520 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr16-5588 chr16 50684433 50684643 + 9.19 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -3226 NM_182854 124460 Hs.460777 NM_153337 ENSG00000167208 SNX20 SLIC1 sorting nexin 20 protein-coding chr19-3974 chr19 1073559 1073769 + 9.19 0.000 intron (NM_012292, intron 4 of 22) intron (NM_012292, intron 4 of 22) 2454 NM_001282335 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr16-4155 chr16 5008966 5009176 + 9.19 0.000 intron (NM_014692, intron 14 of 15) MLT1C|LTR|ERVL-MaLR -24631 NR_038913 100507589 Hs.729936 NR_038913 NAGPA-AS1 - NAGPA antisense RNA 1 ncRNA chr3-3202 chr3 190169452 190169662 + 9.19 0.000 Intergenic Intergenic -47120 NM_001134418 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr9-2662 chr9 36862165 36862375 + 9.19 0.000 intron (NM_001280549, intron 6 of 7) intron (NM_001280549, intron 6 of 7) 2038 NR_039766 100616278 NR_039766 ENSG00000264922 MIR4540 - microRNA 4540 ncRNA chr1-5481 chr1 114090493 114090703 + 9.19 0.000 3' UTR (NM_205848, exon 8 of 8) 3' UTR (NM_205848, exon 8 of 8) 61842 NM_205848 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr8-1641 chr8 122918990 122919200 + 9.19 0.000 intron (NM_001362797, intron 3 of 4) intron (NM_001362797, intron 3 of 4) 106677 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr13-2109 chr13 87612903 87613113 + 9.19 0.000 intron (NR_033829, intron 1 of 5) intron (NR_033829, intron 1 of 5) 5732 NR_039722 100616182 NR_039722 ENSG00000266052 MIR4500 - microRNA 4500 ncRNA chr10-5461 chr10 79207791 79208001 + 9.19 0.000 intron (NM_020338, intron 5 of 24) intron (NM_020338, intron 5 of 24) 138930 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr6-5226 chr6 134787314 134787524 + 9.19 0.000 Intergenic Intergenic 162682 NM_170771 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding chr17-2861 chr17 30715237 30715447 + 9.19 0.000 intron (NR_144394, intron 1 of 8) intron (NR_144394, intron 1 of 8) 5734 NR_144394 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr5-5103 chr5 99223410 99223620 + 9.19 0.000 Intergenic SATR1|Satellite|Satellite -293801 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr12-2223 chr12 52308260 52308470 + 9.19 0.000 intron (NM_001320198, intron 10 of 10) CpG-5582 13033 NM_002282 3889 Hs.720768 NM_002282 ENSG00000170523 KRT83 EKVP5|HB3|Hb-3|KRTHB3|MNLIX keratin 83 protein-coding chr8-5622 chr8 100229927 100230137 + 9.19 0.000 intron (NM_003114, intron 14 of 18) intron (NM_003114, intron 14 of 18) 71697 NM_003114 6674 Hs.591866 NM_003114 ENSG00000104450 SPAG1 CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS sperm associated antigen 1 protein-coding chr21-1796 chr21 38594633 38594843 + 9.19 0.000 intron (NM_001243432, intron 1 of 11) intron (NM_001243432, intron 1 of 11) -9793 NM_001243429 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr4-4237 chr4 17682982 17683192 + 9.19 0.000 intron (NM_015688, intron 7 of 17) intron (NM_015688, intron 7 of 17) 68446 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chr9-3365 chr9 123483596 123483806 + 9.19 0.000 intron (NM_001352968, intron 12 of 18) MIRb|SINE|MIR 1921 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr5-7319 chr5 15837683 15837893 + 9.19 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -97394 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr5-8990 chr5 163910340 163910550 + 9.19 0.000 Intergenic Intergenic 404826 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr15-845 chr15 60798831 60799041 + 9.19 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 117367 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr4-7045 chr4 28083156 28083366 + 9.19 0.000 Intergenic MER57B1|LTR|ERV1 -736321 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr16-2083 chr16 87507148 87507358 + 9.19 0.000 intron (NR_110943, intron 3 of 3) MLT1L|LTR|ERVL-MaLR 13066 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr9-4030 chr9 87492385 87492595 + 9.19 0.000 Intergenic Intergenic -4738 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr10-5610 chr10 93952867 93953077 + 9.19 0.000 Intergenic MER21C|LTR|ERVL 8943 NR_002319 266971 Hs.149255 NR_002319 ENSG00000180764 PIPSL PIP5K1L1|PIP5K1P3|PSMD4P2|bA429H9.1 PIP5K1A and PSMD4 like (pseudogene) pseudo chr7-4849 chr7 104788380 104788590 + 9.19 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) 15607 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chrX-1069 chrX 132377713 132377923 + 9.19 0.000 3' UTR (NM_018388, exon 8 of 8) 3' UTR (NM_018388, exon 8 of 8) 35757 NM_001170702 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr7-4901 chr7 127844614 127844824 + 9.19 0.000 intron (NM_014390, intron 12 of 23) intron (NM_014390, intron 12 of 23) -152790 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr13-3996 chr13 68495061 68495271 + 9.19 0.000 Intergenic L1MB5|LINE|L1 390159 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr16-2947 chr16 4591713 4591923 + 9.19 0.000 intron (NM_001145011, intron 10 of 15) intron (NM_001145011, intron 10 of 15) 23070 NM_145253 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr20-873 chr20 10217958 10218168 + 9.19 0.000 promoter-TSS (NM_130811) promoter-TSS (NM_130811) -735 NM_130811 6616 Hs.167317 NM_003081 ENSG00000132639 SNAP25 CMS18|RIC-4|RIC4|SEC9|SNAP|SNAP-25|SUP|bA416N4.2|dJ1068F16.2 synaptosome associated protein 25 protein-coding chr4-3781 chr4 99501895 99502105 + 9.19 0.000 Intergenic Intergenic -9021 NM_032149 84103 Hs.97501 NM_032149 ENSG00000138813 C4orf17 - chromosome 4 open reading frame 17 protein-coding chr11-6761 chr11 84960818 84961028 + 9.19 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) -37502 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr17-5963 chr17 76744761 76744971 + 9.19 0.000 intron (NM_001353019, intron 8 of 13) intron (NM_001353019, intron 8 of 13) 7365 NR_148242 79157 Hs.73965 NM_024311 ENSG00000092931 MFSD11 ET major facilitator superfamily domain containing 11 protein-coding chr7-3386 chr7 117827917 117828127 + 9.19 0.000 intron (NM_001363351, intron 2 of 22) intron (NM_001363351, intron 2 of 22) 44198 NM_001363349 83992 Hs.592285 NM_033427 ENSG00000077063 CTTNBP2 C7orf8|CORTBP2|Orf4 cortactin binding protein 2 protein-coding chr12-2126 chr12 83627870 83628080 + 9.19 0.000 Intergenic AluSg|SINE|Alu 940820 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-8872 chr2 176728156 176728366 + 9.19 0.000 Intergenic Intergenic 90507 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr15-2420 chr15 69343001 69343211 + 9.19 0.000 intron (NM_001104554, intron 2 of 8) L3|LINE|CR1 28703 NM_001104554 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chr22-674 chr22 17159036 17159246 + 9.19 0.000 promoter-TSS (NR_024482) promoter-TSS (NR_024482) 136 NM_033070 27440 Hs.26890 NM_017829 ENSG00000069998 HDHD5 CECR5 haloacid dehalogenase like hydrolase domain containing 5 protein-coding chr1-15999 chr1 197341751 197341961 + 9.19 0.000 intron (NM_001193640, intron 2 of 9) intron (NM_001193640, intron 2 of 9) 73604 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr10-8033 chr10 63441008 63441218 + 9.19 0.000 intron (NM_001322258, intron 1 of 24) L2b|LINE|L2 10538 NR_134312 105378330 Hs.602852 NR_134312 LOC105378330 - uncharacterized LOC105378330 ncRNA chr18-1324 chr18 74963990 74964200 + 9.19 0.000 intron (NM_017757, intron 7 of 7) intron (NM_017757, intron 7 of 7) 241418 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr12-4860 chr12 60127158 60127368 + 9.19 0.000 Intergenic THE1B|LTR|ERVL-MaLR 437893 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr8-2249 chr8 48841854 48842064 + 9.19 0.000 Intergenic L2|LINE|L2 79470 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr1-9014 chr1 11228933 11229143 + 9.19 0.000 intron (NM_004958, intron 18 of 57) intron (NM_004958, intron 18 of 57) 33513 NM_004958 2475 Hs.338207 NM_004958 ENSG00000198793 MTOR FRAP|FRAP1|FRAP2|RAFT1|RAPT1|SKS mechanistic target of rapamycin kinase protein-coding chr5-8173 chr5 104457933 104458143 + 9.19 0.000 Intergenic Intergenic -641436 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr12-1911 chr12 80130210 80130420 + 9.19 0.000 intron (NM_001368062, intron 1 of 62) intron (NM_001368062, intron 1 of 62) 30778 NM_001368062 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr15-4591 chr15 59918446 59918656 + 9.19 0.000 Intergenic Intergenic -85760 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr1-12933 chr1 145913778 145913988 + 9.19 0.000 intron (NM_001184795, intron 3 of 3) L2a|LINE|L2 -3694 NM_001303041 8515 Hs.158237 NM_003637 ENSG00000143127 ITGA10 PRO827 integrin subunit alpha 10 protein-coding chr8-4516 chr8 122155725 122155935 + 9.19 0.000 Intergenic Intergenic 412814 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr1-9091 chr1 16198783 16198993 + 9.19 0.000 intron (NM_153213, intron 15 of 15) L3b|LINE|CR1 13764 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr2-14386 chr2 219558112 219558322 + 9.19 0.000 exon (NM_015311, exon 10 of 21) exon (NM_015311, exon 10 of 21) -9070 NR_036082 100423039 NR_036082 ENSG00000265252 MIR3132 - microRNA 3132 ncRNA chr9-5276 chr9 82271110 82271320 + 9.19 0.000 Intergenic Intergenic 282443 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr2-6645 chr2 2739169 2739379 + 9.19 0.000 Intergenic Intergenic 386752 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr15-2220 chr15 93050261 93050471 + 9.19 0.000 intron (NM_001166286, intron 2 of 2) intron (NM_001166286, intron 2 of 2) 22790 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr2-9186 chr2 215764580 215764790 + 9.19 0.000 intron (NR_037195, intron 1 of 9) MLT1K|LTR|ERVL-MaLR 46642 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr4-5008 chr4 138820667 138820877 + 9.19 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 191874 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr5-5091 chr5 97600890 97601100 + 9.19 0.000 intron (NR_105028, intron 2 of 3) L1MA7|LINE|L1 96299 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr2-9383 chr2 230612864 230613074 + 9.19 0.000 Intergenic LTR37B|LTR|ERV1 87560 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr12-7484 chr12 66353761 66353971 + 9.19 0.000 intron (NM_001366722, intron 23 of 24) intron (NM_001366722, intron 23 of 24) 51321 NR_135080 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr22-1858 chr22 38772216 38772426 + 9.19 0.000 Intergenic MER41A|LTR|ERV1 -16323 NM_015374 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr3-7713 chr3 49607125 49607335 + 9.19 0.000 intron (NM_003458, intron 1 of 11) intron (NM_003458, intron 1 of 11) 52753 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr4-4643 chr4 81532559 81532769 + 9.19 0.000 Intergenic MER112|DNA|hAT-Charlie -60757 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr4-6185 chr4 43768510 43768720 + 9.19 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -248246 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr4-4797 chr4 104000501 104000711 + 9.19 0.000 Intergenic L2b|LINE|L2 -280621 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr21-1771 chr21 36718742 36718952 + 9.19 0.000 intron (NM_009586, intron 3 of 9) intron (NM_009586, intron 3 of 9) 19732 NM_005069 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 SIM bHLH transcription factor 2 protein-coding chr1-10363 chr1 154948207 154948417 + 9.19 0.000 exon (NM_001317734, exon 5 of 10) exon (NM_001317734, exon 5 of 10) -5654 NM_001323012 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr2-14189 chr2 207056825 207057035 + 9.19 0.000 Intergenic L1ME4a|LINE|L1 53143 NR_036227 100423036 NR_036227 ENSG00000253008 MIR2355 mir-2355 microRNA 2355 ncRNA chr19-2666 chr19 11180244 11180454 + 9.19 0.000 intron (NM_001136191, intron 4 of 12) FLAM_A|SINE|Alu 14241 NM_015493 25959 Hs.284208 NM_015493 ENSG00000197256 KANK2 ANKRD25|MXRA3|NPHS16|PPKWH|SIP KN motif and ankyrin repeat domains 2 protein-coding chr1-2873 chr1 207819051 207819261 + 9.19 0.000 non-coding (NR_026817, exon 1 of 1) non-coding (NR_026817, exon 1 of 1) 777 NR_026817 148696 Hs.125511 NM_001039568 LOC148696 - uncharacterized LOC148696 ncRNA chr5-4000 chr5 22615022 22615232 + 9.19 0.000 intron (NM_004061, intron 1 of 14) MER44B|DNA|TcMar-Tigger 238217 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr6-2362 chr6 134446401 134446611 + 9.19 0.000 intron (NR_038218, intron 1 of 2) intron (NR_038218, intron 1 of 2) 8116 NR_038218 154092 Hs.223718 NR_038216 LINC01010 - long intergenic non-protein coding RNA 1010 ncRNA chr1-6687 chr1 53262170 53262380 + 9.19 0.000 intron (NM_004631, intron 11 of 18) intron (NM_004631, intron 11 of 18) 23665 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 - uncharacterized LOC100507564 ncRNA chr22-1158 chr22 50342272 50342482 + 9.19 0.000 promoter-TSS (NM_001365836) promoter-TSS (NM_001365836) -950 NM_001351648 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr6-7047 chr6 26253319 26253529 + 9.19 0.000 Intergenic Intergenic 1773 NM_003524 8345 Hs.247815 NM_003524 ENSG00000275713 HIST1H2BH H2B/j|H2BFJ histone cluster 1 H2B family member h protein-coding chr12-3891 chr12 119685048 119685258 + 9.19 0.000 TTS (NM_001206999) TTS (NM_001206999) 17020 NM_006253 5564 Hs.741184 NM_006253 ENSG00000111725 PRKAB1 AMPK|HAMPKb protein kinase AMP-activated non-catalytic subunit beta 1 protein-coding chr15-2488 chr15 99977041 99977251 + 9.19 0.000 intron (NM_139057, intron 20 of 21) MamGypLTR1a|LTR|Gypsy 170123 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr13-1822 chr13 60509903 60510113 + 9.19 0.000 intron (NM_030794, intron 9 of 13) intron (NM_030794, intron 9 of 13) 112788 NM_001146070 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr6-6827 chr6 7162290 7162500 + 9.19 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 54434 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr17-4077 chr17 79188917 79189127 + 9.19 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 114085 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr6-4254 chr6 8271175 8271385 + 9.19 0.000 Intergenic Intergenic 164265 NM_001370478 51000 Hs.285847 NM_015948 ENSG00000124786 SLC35B3 C6orf196|CGI-19|PAPST2 solute carrier family 35 member B3 protein-coding chr4-5904 chr4 138889237 138889447 + 9.19 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 123304 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr1-4477 chr1 14486486 14486696 + 9.19 0.000 Intergenic Intergenic -66618 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr4-4998 chr4 137700157 137700367 + 9.19 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 154531 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr8-6126 chr8 28962576 28962786 + 9.19 0.000 intron (NM_001324393, intron 2 of 11) intron (NM_001324393, intron 2 of 11) 71367 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr7-8985 chr7 100358314 100358524 + 9.19 0.000 intron (NR_036570, intron 14 of 16) intron (NR_036570, intron 14 of 16) 416 NM_178238 29990 Hs.632314 NM_013440 ENSG00000121716 PILRB FDFACT1|FDFACT2 paired immunoglobin like type 2 receptor beta protein-coding chr6-2378 chr6 139828852 139829062 + 9.19 0.000 intron (NR_038399, intron 1 of 2) intron (NR_038399, intron 1 of 2) -25893 NR_138541 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr12-5185 chr12 104588442 104588652 + 9.19 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -3086 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr4-7997 chr4 115629226 115629436 + 9.19 0.000 Intergenic Intergenic -515711 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr1-10354 chr1 154499934 154500144 + 9.19 0.000 intron (NR_135169, intron 1 of 5) intron (NR_135169, intron 1 of 5) -2180 NM_182499 126668 Hs.387671 NM_182499 ENSG00000163239 TDRD10 - tudor domain containing 10 protein-coding chr2-12883 chr2 98294748 98294958 + 9.19 0.000 intron (NM_001345864, intron 17 of 21) MIR|SINE|MIR -51302 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr8-4008 chr8 56925237 56925447 + 9.19 0.000 Intergenic Intergenic 68525 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr14-2097 chr14 73044913 73045123 + 9.19 0.000 Intergenic AluSx3|SINE|Alu -13516 NM_021239 58517 Hs.531106 NM_021239 ENSG00000119707 RBM25 NET52|RED120|RNPC7|S164|Snu71|fSAP94 RNA binding motif protein 25 protein-coding chr11-6341 chr11 63076310 63076520 + 9.19 0.000 Intergenic L1PA3|LINE|L1 -60570 NM_001184733 9376 Hs.266223 NM_004254 ENSG00000149452 SLC22A8 OAT3 solute carrier family 22 member 8 protein-coding chr5-5636 chr5 155392104 155392314 + 9.19 0.000 Intergenic MIR|SINE|MIR 378454 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chrX-4730 chrX 91326036 91326246 + 9.19 0.000 Intergenic MER47A|DNA|TcMar-Tigger -108698 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr5-5633 chr5 155046850 155047060 + 9.19 0.000 Intergenic Intergenic 33200 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr2-6917 chr2 106202244 106202454 + 9.19 0.000 Intergenic Intergenic -8010 NM_001253875 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr4-4392 chr4 41516574 41516784 + 9.19 0.000 intron (NM_001289122, intron 2 of 25) intron (NM_001289122, intron 2 of 25) -21478 NM_001330672 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr20-1422 chr20 36310594 36310804 + 9.19 0.000 intron (NM_001365621, intron 1 of 12) intron (NM_001365621, intron 1 of 12) 4360 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr1-6047 chr1 84719375 84719585 + 9.19 0.000 Intergenic Intergenic -29012 NM_001166295 117178 Hs.22587 NM_014021 ENSG00000117155 SSX2IP ADIP|hMsd1 SSX family member 2 interacting protein protein-coding chr16-4806 chr16 86125447 86125657 + 9.19 0.000 Intergenic L1M5|LINE|L1 -70629 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr5-6634 chr5 43180335 43180545 + 9.19 0.000 Intergenic Intergenic -11785 NM_153361 167359 Hs.25845 NM_153361 ENSG00000177453 NIM1K NIM1 NIM1 serine/threonine protein kinase protein-coding chr1-4247 chr1 215567211 215567421 + 9.19 0.000 promoter-TSS (NM_016121) promoter-TSS (NM_016121) 12 NM_001319294 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr14-3334 chr14 89140094 89140304 + 9.19 0.000 Intergenic Intergenic 277034 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr2-9582 chr2 240946680 240946890 + 9.19 0.000 intron (NM_001351305, intron 15 of 31) MLT1K|LTR|ERVL-MaLR 20666 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr3-2298 chr3 111859530 111859740 + 9.19 0.000 promoter-TSS (NM_001134439) promoter-TSS (NM_001134439) -192 NM_001134439 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr18-3408 chr18 62609536 62609746 + 9.19 0.000 Intergenic Intergenic 86616 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr17-3681 chr17 13200718 13200928 + 9.19 0.000 Intergenic MLT1F2-int|LTR|ERVL-MaLR 105937 NR_146885 105371541 NR_146885 ENSG00000234634 LINC02093 - long intergenic non-protein coding RNA 2093 ncRNA chr9-8341 chr9 116163978 116164188 + 9.19 0.000 intron (NM_002581, intron 1 of 21) intron (NM_002581, intron 1 of 21) 10292 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr15-3728 chr15 55101490 55101700 + 9.19 0.000 Intergenic Intergenic 44848 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr7-5410 chr7 34773538 34773748 + 9.19 0.000 intron (NR_015356, intron 1 of 4) ERV3-16A3_I-int|LTR|ERVL -15371 NR_033665 404744 Hs.487951 NM_207283 ENSG00000197085 NPSR1-AS1 AAA1 NPSR1 antisense RNA 1 ncRNA chr9-3176 chr9 125521172 125521382 + 9.19 0.000 TTS (NM_001006618) TTS (NM_001006618) 185931 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr20-2390 chr20 18218403 18218613 + 9.19 0.000 Intergenic Intergenic -69720 NM_001282995 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr2-6999 chr2 140916450 140916660 + 9.19 0.000 intron (NM_018557, intron 21 of 90) MamSINE1|SINE|tRNA-RTE -329870 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr4-4906 chr4 122161474 122161684 + 9.19 0.000 Intergenic AluJb|SINE|Alu -9024 NM_015312 84162 Hs.408142 NM_015312 ENSG00000138688 KIAA1109 ALKKUCS|FSA|Tweek KIAA1109 protein-coding chr9-5291 chr9 84033171 84033381 + 9.19 0.000 Intergenic L1MA1|LINE|L1 -30167 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr9-7259 chr9 5291935 5292145 + 9.19 0.000 Intergenic Intergenic 12188 NM_001329191 6019 Hs.127032 NM_005059 ENSG00000107014 RLN2 H2|H2-RLX|RLXH2|bA12D24.1.1|bA12D24.1.2 relaxin 2 protein-coding chr14-3318 chr14 87306655 87306865 + 9.19 0.000 Intergenic L2c|LINE|L2 348534 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr17-3365 chr17 79399803 79400013 + 9.19 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 116240 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr10-5624 chr10 95539682 95539892 + 9.19 0.000 intron (NM_001290295, intron 1 of 24) intron (NM_001290295, intron 1 of 24) 21584 NM_001290295 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr17-2027 chr17 17912792 17913002 + 9.19 0.000 intron (NM_001288787, intron 1 of 13) SVA_D|Retroposon|SVA 59503 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr1-4192 chr1 55490603 55490813 + 9.19 0.000 Intergenic L2c|LINE|L2 265067 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr19-3536 chr19 43736067 43736277 + 9.19 0.000 intron (NM_019108, intron 9 of 13) MIRb|SINE|MIR 18790 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr3-3945 chr3 50274648 50274858 + 9.19 0.000 intron (NM_001005914, intron 12 of 17) intron (NM_001005914, intron 12 of 17) 1517 NR_106932 102465526 NR_106932 ENSG00000283848 MIR6872 hsa-mir-6872 microRNA 6872 ncRNA chr6-8385 chr6 150126461 150126671 + 9.19 0.000 Intergenic Intergenic -16478 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr20-3795 chr20 22691241 22691451 + 9.19 0.000 Intergenic Intergenic -6002 NR_146528 105372566 Hs.555065 NR_146527 LINC01747 - long intergenic non-protein coding RNA 1747 ncRNA chr6-6103 chr6 151036381 151036591 + 9.19 0.000 intron (NM_001350486, intron 25 of 27) intron (NM_001350486, intron 25 of 27) 29478 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr12-4424 chr12 8534139 8534349 + 9.19 0.000 3' UTR (NM_014358, exon 6 of 6) 3' UTR (NM_014358, exon 6 of 6) 6661 NM_014358 26253 Hs.236516 NM_014358 ENSG00000166523 CLEC4E CLECSF9|MINCLE C-type lectin domain family 4 member E protein-coding chr2-13605 chr2 158847969 158848179 + 9.19 0.000 Intergenic HERVE-int|LTR|ERV1 52757 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr5-4528 chr5 15094977 15095187 + 9.19 0.000 Intergenic Intergenic 171478 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr4-2789 chr4 25357356 25357566 + 9.19 0.000 intron (NM_024936, intron 8 of 12) L3|LINE|CR1 -19802 NM_013367 29945 Hs.152173 NM_013367 ENSG00000053900 ANAPC4 APC4 anaphase promoting complex subunit 4 protein-coding chr14-4482 chr14 36224211 36224421 + 9.19 0.000 Intergenic MIRb|SINE|MIR -47665 NR_049735 100886964 Hs.742592 NR_049735 PTCSC3 - papillary thyroid carcinoma susceptibility candidate 3 ncRNA chr17-4400 chr17 30784557 30784767 + 9.19 0.000 intron (NM_015986, intron 7 of 7) intron (NM_015986, intron 7 of 7) 40030 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr1-10851 chr1 204602119 204602329 + 9.19 0.000 Intergenic Intergenic 83514 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr16-3508 chr16 17518434 17518644 + 9.19 0.000 Intergenic Intergenic -47579 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr3-1957 chr3 47578148 47578358 + 9.19 0.000 intron (NM_001206945, intron 1 of 4) CpG 612 NM_001206943 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr6-3959 chr6 97052345 97052555 + 9.19 0.000 intron (NR_136579, intron 2 of 7) MER20B|DNA|hAT-Charlie 42374 NM_001323261 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr20-4033 chr20 36950063 36950273 + 9.19 0.000 intron (NM_015474, intron 1 of 15) intron (NM_015474, intron 1 of 15) 1540 NM_001363729 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr9-8427 chr9 121421232 121421442 + 9.19 0.000 Intergenic L1M1|LINE|L1 -51033 NM_001270527 2040 Hs.253903 NM_004099 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding chr9-7932 chr9 89932282 89932492 + 9.19 0.000 Intergenic Intergenic -37029 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr1-2795 chr1 1481869 1482079 + 9.19 0.000 intron (NM_031921, intron 5 of 15) CpG 4125 NM_001317238 83858 Hs.729021 NM_031921 ENSG00000160072 ATAD3B AAA-TOB3|TOB3 ATPase family AAA domain containing 3B protein-coding chr15-3073 chr15 62465425 62465635 + 9.19 0.000 Intergenic Intergenic 122501 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr1-4305 chr1 31573908 31574118 + 9.19 0.000 Intergenic Intergenic -2472 NM_001204414 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr13-2825 chr13 105039514 105039724 + 9.19 0.000 Intergenic MER70-int|LTR|ERVL -426248 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr10-5673 chr10 98731450 98731660 + 9.19 0.000 intron (NM_001166245, intron 2 of 9) L1M4a2|LINE|L1 193013 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr5-3926 chr5 174910296 174910506 + 9.19 0.000 Intergenic Intergenic 85330 NR_046113 441116 Hs.533036 NM_001004348 ENSG00000204754 LINC01951 - long intergenic non-protein coding RNA 1951 ncRNA chr8-2650 chr8 72439121 72439331 + 9.19 0.000 Intergenic Intergenic -97999 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr15-2001 chr15 43920997 43921207 + 9.19 0.000 intron (NM_001322951, intron 1 of 14) intron (NM_001322951, intron 1 of 14) -42931 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr10-6834 chr10 22086793 22087003 + 9.19 0.000 Intergenic Intergenic -83168 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr13-1405 chr13 24707375 24707585 + 9.19 0.000 intron (NM_001676, intron 17 of 22) intron (NM_001676, intron 17 of 22) 27069 NM_001185085 479 Hs.147111 NM_001676 ENSG00000075673 ATP12A ATP1AL1|HK ATPase H+/K+ transporting non-gastric alpha2 subunit protein-coding chr9-8899 chr9 136630375 136630585 + 9.19 0.000 Intergenic Intergenic -13299 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr4-6288 chr4 82213406 82213616 + 9.19 0.000 Intergenic Intergenic 160480 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr12-3789 chr12 54855139 54855349 + 9.19 0.000 intron (NM_058173, intron 2 of 3) intron (NM_058173, intron 2 of 3) 728 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr6-3077 chr6 77038864 77039074 + 9.19 0.000 Intergenic Intergenic 425053 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr5-4436 chr5 2384865 2385075 + 9.19 0.000 Intergenic Intergenic -72769 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr11-4682 chr11 64092611 64092821 + 9.19 0.000 intron (NM_014067, intron 3 of 10) L2b|LINE|L2 -11174 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr11-8515 chr11 124507014 124507224 + 9.19 0.000 Intergenic L1PA13|LINE|L1 36535 NM_001005195 219858 Hs.553634 NM_001005195 ENSG00000170953 OR8B12 OR11-317 olfactory receptor family 8 subfamily B member 12 protein-coding chr15-2621 chr15 66842986 66843196 + 9.19 0.000 Intergenic CpG 113424 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr4-2244 chr4 155746110 155746320 + 9.19 0.000 Intergenic LTR40b|LTR|ERVL -12806 NM_000857 2983 Hs.77890 NM_000857 ENSG00000061918 GUCY1B1 GC-S-beta-1|GC-SB3|GUC1B3|GUCB3|GUCSB3|GUCY1B3 guanylate cyclase 1 soluble subunit beta 1 protein-coding chr9-8150 chr9 103214338 103214548 + 9.19 0.000 intron (NR_121578, intron 7 of 9) AluSc|SINE|Alu 110590 NR_121578 101928496 Hs.410860 NR_121578 ENSG00000225564 LINC01492 - long intergenic non-protein coding RNA 1492 ncRNA chr10-8282 chr10 76884141 76884351 + 9.19 0.000 TTS (NM_002247) TTS (NM_002247) -3798 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr11-8244 chr11 66879642 66879852 + 9.19 0.000 intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) 22683 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr20-2028 chr20 63575243 63575453 + 9.19 0.000 Intergenic Intergenic -1109 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr4-4868 chr4 113943964 113944174 + 9.19 0.000 intron (NM_001354211, intron 4 of 6) L2a|LINE|L2 35578 NM_001354211 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr12-1991 chr12 132055671 132055881 + 9.19 0.000 intron (NM_015409, intron 45 of 52) intron (NM_015409, intron 45 of 52) 24552 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr18-1301 chr18 67187007 67187217 + 9.19 0.000 Intergenic L1MB5|LINE|L1 105528 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr3-9029 chr3 21844763 21844973 + 9.19 0.000 Intergenic Intergenic -93658 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr6-2119 chr6 1798396 1798606 + 9.19 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 188586 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chrX-3055 chrX 104999513 104999723 + 9.19 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 221075 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr3-4461 chr3 46228364 46228574 + 9.19 0.000 Intergenic Intergenic -13912 NM_178328 1232 Hs.506190 NM_001837 ENSG00000183625 CCR3 CC-CKR-3|CD193|CKR3|CMKBR3 C-C motif chemokine receptor 3 protein-coding chr12-3731 chr12 23896087 23896297 + 9.19 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) 53478 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr21-1610 chr21 18095307 18095517 + 9.19 0.000 intron (NM_001204178, intron 2 of 5) L1MA2|LINE|L1 -149421 NM_024944 140578 Hs.283725 NM_024944 ENSG00000154645 CHODL C21orf68|MT75|PRED12 chondrolectin protein-coding chr11-1753 chr11 129279344 129279554 + 9.19 0.000 intron (NR_145484, intron 1 of 1) CpG 3715 NR_145484 399975 NM_207431 LOC399975 - uncharacterized LOC399975 ncRNA chr7-6885 chr7 67301247 67301457 + 9.19 0.000 intron (NR_022007, intron 1 of 4) AluSx1|SINE|Alu 1090 NR_022007 5382 Hs.712714 NR_022007 ENSG00000067601 PMS2P4 PMS2L4|PMS6 PMS1 homolog 2, mismatch repair system component pseudogene 4 pseudo chr21-1016 chr21 19920363 19920573 + 9.19 0.000 Intergenic L1MC1|LINE|L1 -20713 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr3-5119 chr3 50531932 50532142 + 9.19 0.000 Intergenic MIRc|SINE|MIR -27793 NM_001291101 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr1-11840 chr1 34725652 34725862 + 9.19 0.000 Intergenic Intergenic -29290 NM_005268 2709 Hs.198249 NM_005268 ENSG00000189280 GJB5 CX31.1 gap junction protein beta 5 protein-coding chr20-2521 chr20 34689068 34689278 + 9.19 0.000 Intergenic L1MEd|LINE|L1 -11888 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr10-6863 chr10 28672492 28672702 + 9.19 0.000 Intergenic Intergenic -4924 NM_012342 25805 Hs.533336 NM_012342 ENSG00000095739 BAMBI NMA BMP and activin membrane bound inhibitor protein-coding chr19-5774 chr19 30934809 30935019 + 9.19 0.000 Intergenic Intergenic -232596 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr19-2668 chr19 11416774 11416984 + 9.19 0.000 exon (NM_001161616, exon 3 of 19) exon (NM_001161616, exon 3 of 19) 2435 NM_001161616 57139 Hs.375142 NM_001035223 ENSG00000205517 RGL3 - ral guanine nucleotide dissociation stimulator like 3 protein-coding chr2-5744 chr2 218788872 218789082 + 9.19 0.000 intron (NM_000784, intron 1 of 8) intron (NM_000784, intron 1 of 8) 6830 NM_000784 1593 Hs.516700 NM_000784 ENSG00000135929 CYP27A1 CP27|CTX|CYP27 cytochrome P450 family 27 subfamily A member 1 protein-coding chr12-2433 chr12 50940323 50940533 + 9.19 0.000 Intergenic Intergenic -12116 NM_001109619 613227 Hs.702849 NM_001109619 ENSG00000214511 HIGD1C GM921 HIG1 hypoxia inducible domain family member 1C protein-coding chr21-537 chr21 41721361 41721571 + 9.19 0.000 Intergenic THE1D|LTR|ERVL-MaLR 5030 NR_024028 54089 Hs.98186 NR_024028 ENSG00000232401 LINC00112 C21orf22|NCRNA00112 long intergenic non-protein coding RNA 112 ncRNA chr1-6477 chr1 20962776 20962986 + 9.19 0.000 intron (NM_003760, intron 7 of 31) Tigger2b_Pri|DNA|TcMar-Tigger 25551 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr5-5377 chr5 133802708 133802918 + 9.19 0.000 Intergenic Intergenic -110864 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr7-7098 chr7 332510 332720 + 9.19 0.000 Intergenic Intergenic -46810 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr1-3538 chr1 214261719 214261929 + 9.19 0.000 Intergenic Intergenic -19335 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr16-1113 chr16 89216278 89216488 + 9.19 0.000 Intergenic LTR55|LTR|ERVL? -1320 NR_037705 197320 Hs.647385 NM_182531 ENSG00000170100 ZNF778 - zinc finger protein 778 protein-coding chr2-2655 chr2 195520547 195520757 + 9.19 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -136306 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr20-2575 chr20 37438903 37439113 + 9.19 0.000 Intergenic L2c|LINE|L2 81295 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr13-1614 chr13 48616456 48616666 + 9.19 0.000 Intergenic LTR47A2|LTR|ERVL -35660 NR_051983 100129597 Hs.175225 NR_051983 ENSG00000233610 LINC00462 - long intergenic non-protein coding RNA 462 ncRNA chr5-4651 chr5 35944688 35944898 + 9.19 0.000 Intergenic Intergenic 5992 NR_104630 100506406 Hs.116864 NR_104630 ENSG00000249748 LOC100506406 - uncharacterized LOC100506406 ncRNA chr6-3900 chr6 65330165 65330375 + 9.19 0.000 3' UTR (NM_001142801, exon 12 of 12) 3' UTR (NM_001142801, exon 12 of 12) 28852 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr5-4028 chr5 35538706 35538916 + 9.19 0.000 Intergenic L4_C_Mam|LINE|RTE-X -79052 NM_144722 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr2-13227 chr2 124191626 124191836 + 9.19 0.000 intron (NM_130773, intron 1 of 23) AluSx|SINE|Alu 166444 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr11-9956 chr11 76806684 76806894 + 9.19 0.000 Intergenic MIRc|SINE|MIR 15037 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr1-4472 chr1 9827523 9827733 + 9.19 0.000 Intergenic Intergenic -3102 NM_001009566 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr17-7609 chr17 27087172 27087382 + 9.19 0.000 intron (NR_135673, intron 1 of 3) AluY|SINE|Alu 1964 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr1-6046 chr1 83901664 83901874 + 9.19 0.000 intron (NM_001350215, intron 17 of 19) intron (NM_001350215, intron 17 of 19) -40773 NR_119375 101927587 Hs.621230 NR_119375 ENSG00000233008 LINC01725 - long intergenic non-protein coding RNA 1725 ncRNA chr5-7680 chr5 55254356 55254566 + 9.19 0.000 Intergenic L2b|LINE|L2 -20744 NR_125346 10309 Hs.3041 NM_021147 ENSG00000152669 CCNO CCNU|CILD29|UDG2 cyclin O protein-coding chr2-8348 chr2 109313357 109313567 + 9.19 0.000 TTS (NR_036224) TTS (NR_036224) 163 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr10-2608 chr10 78149221 78149431 + 9.19 0.000 Intergenic MIRc|SINE|MIR -99299 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA chr7-5133 chr7 5382199 5382409 + 9.19 0.000 intron (NM_001080495, intron 5 of 29) intron (NM_001080495, intron 5 of 29) 41242 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chrX-3337 chrX 130560312 130560522 + 9.19 0.000 Intergenic MLT2D|LTR|ERVL 65476 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr3-4203 chr3 131239514 131239724 + 9.19 0.000 intron (NM_001353043, intron 15 of 17) intron (NM_001353043, intron 15 of 17) -122226 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr21-813 chr21 31710766 31710976 + 9.19 0.000 intron (NM_020706, intron 1 of 19) L2a|LINE|L2 21247 NM_001145445 57466 Hs.17255 NM_020706 ENSG00000156304 SCAF4 SFRS15|SRA4 SR-related CTD associated factor 4 protein-coding chr2-8833 chr2 171982791 171983001 + 9.19 0.000 intron (NR_027862, intron 9 of 9) intron (NR_027862, intron 9 of 9) -17057 NM_199227 254042 Hs.298250 NM_199227 ENSG00000172878 METAP1D MAP 1D|MAP1D|MetAP 1D|Metap1l methionyl aminopeptidase type 1D, mitochondrial protein-coding chrX-4222 chrX 37998807 37999017 + 9.19 0.000 Intergenic Intergenic -7641 NM_001163335 94122 Hs.662334 NM_138780 ENSG00000147041 SYTL5 slp5 synaptotagmin like 5 protein-coding chr21-1643 chr21 23660180 23660390 + 9.19 0.000 Intergenic Intergenic -275450 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA chr19-3542 chr19 45080339 45080549 + 9.19 0.000 intron (NM_001319055, intron 2 of 2) AluSx|SINE|Alu 1184 NM_001007269 79760 Hs.466919 NM_024707 ENSG00000142252 GEMIN7 SIP3 gem nuclear organelle associated protein 7 protein-coding chr8-3473 chr8 99558355 99558565 + 9.19 0.000 intron (NM_017890, intron 31 of 61) L1PA5|LINE|L1 -21599 NR_030596 100126309 NR_030596 ENSG00000216069 MIR875 MIRN875|hsa-mir-875 microRNA 875 ncRNA chr2-7504 chr2 19798097 19798307 + 9.19 0.000 Intergenic L2c|LINE|L2 -70652 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr6-6886 chr6 11815045 11815255 + 9.19 0.000 Intergenic Intergenic -36103 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr10-4614 chr10 117227151 117227361 + 9.19 0.000 Intergenic Intergenic -13858 NM_003054 6571 Hs.596992 NM_003054 ENSG00000165646 SLC18A2 PKDYS2|SVAT|SVMT|VAT2|VMAT2 solute carrier family 18 member A2 protein-coding chr16-4309 chr16 28586539 28586749 + 9.19 0.000 intron (NM_138414, intron 4 of 9) intron (NM_138414, intron 4 of 9) 9836 NM_177528 6799 Hs.546304 NM_001054 ENSG00000197165 SULT1A2 HAST4|P-PST|P-PST 2|ST1A2|STP2|TSPST2 sulfotransferase family 1A member 2 protein-coding chr7-5460 chr7 40527349 40527559 + 9.19 0.000 intron (NM_001193312, intron 11 of 12) intron (NM_001193312, intron 11 of 12) 392478 NM_001193312 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding chr1-8652 chr1 205502210 205502420 + 9.19 0.000 Intergenic L2b|LINE|L2 -2354 NM_212502 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr3-4758 chr3 100679228 100679438 + 9.19 0.000 intron (NM_001308362, intron 9 of 9) L1MA3|LINE|L1 -29957 NM_001007565 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr16-1228 chr16 89257217 89257427 + 9.19 0.000 Intergenic LTR1A2|LTR|ERV1 -38806 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr5-6285 chr5 109713385 109713595 + 9.19 0.000 intron (NM_002372, intron 1 of 21) intron (NM_002372, intron 1 of 21) 24124 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr2-8039 chr2 71248236 71248446 + 9.19 0.000 Intergenic L1PA6|LINE|L1 -21238 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr10-9028 chr10 123106666 123106876 + 9.19 0.000 Intergenic Intergenic -29199 NM_001105574 340784 Hs.531194 NM_001105574 ENSG00000188620 HMX3 NKX-5.1|NKX5.1|Nkx5-1 H6 family homeobox 3 protein-coding chr1-3023 chr1 869863 870073 + 9.19 0.000 intron (NR_027055, intron 2 of 2) CpG 6834 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr2-7378 chr2 4850880 4851090 + 9.19 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -194763 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr1-5910 chr1 10938799 10939009 + 9.19 0.000 Intergenic Intergenic 27783 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr7-2493 chr7 18257811 18258021 + 9.19 0.000 intron (NM_001321872, intron 2 of 11) intron (NM_001321872, intron 2 of 11) -32176 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr4-7856 chr4 102789447 102789657 + 9.19 0.000 intron (NR_125932, intron 4 of 4) L1MB5|LINE|L1 12515 NR_125932 102723704 Hs.638374 NR_125932 LOC102723704 - uncharacterized LOC102723704 ncRNA chr15-2224 chr15 95051975 95052185 + 9.19 0.000 Intergenic L1PA14|LINE|L1 196717 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr1-7959 chr1 185378044 185378254 + 9.19 0.000 Intergenic Intergenic -43110 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr17-3981 chr17 65931825 65932035 + 9.19 0.000 intron (NM_001353129, intron 18 of 26) L1MA7|LINE|L1 -105387 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr13-2708 chr13 93158715 93158925 + 9.19 0.000 Intergenic Intergenic -67987 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr11-4752 chr11 110252171 110252381 + 9.19 0.000 intron (NM_001260495, intron 2 of 8) intron (NM_001260495, intron 2 of 8) 44436 NM_001260495 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr7-5250 chr7 18144356 18144566 + 9.19 0.000 intron (NM_001204144, intron 1 of 12) intron (NM_001204144, intron 1 of 12) -17152 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr7-5291 chr7 24342313 24342523 + 9.19 0.000 Intergenic L2b|LINE|L2 58228 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr13-1723 chr13 98352893 98353103 + 9.19 0.000 intron (NM_005766, intron 3 of 26) intron (NM_005766, intron 3 of 26) 144474 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr17-6424 chr17 4679648 4679858 + 9.19 0.000 intron (NM_014389, intron 5 of 16) intron (NM_014389, intron 5 of 16) 24384 NM_001278241 27043 Hs.744899 NM_014389 ENSG00000141456 PELP1 MNAR|P160 proline, glutamate and leucine rich protein 1 protein-coding chr5-7362 chr5 19043766 19043976 + 9.19 0.000 Intergenic HAL1b|LINE|L1 842401 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr4-3621 chr4 9767590 9767800 + 9.19 0.000 Intergenic MER39|LTR|ERV1 -13939 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr9-8253 chr9 111320039 111320249 + 9.19 0.000 Intergenic L1MB5|LINE|L1 10080 NM_205859 26248 Hs.381312 NM_205859 ENSG00000171133 OR2K2 HSHTPCRH06|HTPCRH06|OR2AN1P|OR2AR1P olfactory receptor family 2 subfamily K member 2 protein-coding chr6-5478 chr6 161584982 161585192 + 9.19 0.000 intron (NM_004562, intron 7 of 11) intron (NM_004562, intron 7 of 11) 114110 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr1-15331 chr1 119664370 119664580 + 9.19 0.000 Intergenic Intergenic -16209 NM_001080470 90874 Hs.381105 NM_001080470 ENSG00000143067 ZNF697 - zinc finger protein 697 protein-coding chr4-3649 chr4 22977915 22978125 + 9.19 0.000 Intergenic L1PBb|LINE|L1 263931 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr2-13470 chr2 146678446 146678656 + 9.19 0.000 Intergenic LTR1D|LTR|ERV1 91494 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr5-6953 chr5 140394670 140394880 + 9.19 0.000 Intergenic AluJo|SINE|Alu -7039 NM_020690 404734 Hs.594084 NM_020690 ENSG00000254996 ANKHD1-EIF4EBP3 MASK-BP3|MASK-BP3ARF ANKHD1-EIF4EBP3 readthrough protein-coding chr2-6132 chr2 224684896 224685106 + 9.19 0.000 Intergenic L1ME3|LINE|L1 -99604 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr11-1804 chr11 123195325 123195535 + 9.19 0.000 promoter-TSS (NM_024769) promoter-TSS (NM_024769) -182 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr11-2519 chr11 72619751 72619961 + 9.19 0.000 intron (NM_001143839, intron 1 of 29) MIRb|SINE|MIR -4726 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chr18-676 chr18 59024864 59025074 + 9.19 0.000 Intergenic Intergenic -10710 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr8-6202 chr8 35769272 35769482 + 9.19 0.000 intron (NM_001322818, intron 15 of 16) intron (NM_001322818, intron 15 of 16) -59057 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr1-12260 chr1 224358344 224358554 + 9.19 0.000 intron (NR_102347, intron 1 of 3) intron (NR_102347, intron 1 of 3) 1570 NM_014184 29097 Hs.445890 NM_014184 ENSG00000143771 CNIH4 CNIH-4|CNIH2|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding chrX-1776 chrX 71108994 71109204 + 9.19 0.000 intron (NM_000206, intron 5 of 7) intron (NM_000206, intron 5 of 7) -2359 NR_033212 158830 Hs.443936 NM_001025265 ENSG00000204165 CXorf65 - chromosome X open reading frame 65 protein-coding chr11-10299 chr11 106668216 106668426 + 9.19 0.000 Intergenic L1PB4|LINE|L1 350155 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr11-7824 chr11 109929262 109929472 + 9.19 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -164025 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr1-3222 chr1 177778027 177778237 + 9.19 0.000 Intergenic Intergenic 77608 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr1-10192 chr1 111999250 111999460 + 9.19 0.000 TTS (NR_145438) TTS (NR_145438) 8819 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr10-8656 chr10 100022514 100022724 + 9.19 0.000 Intergenic MER57A-int|LTR|ERV1 -12672 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr11-8314 chr11 75334512 75334722 + 9.19 0.000 TTS (NR_029891) TTS (NR_029891) 569 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr6-2298 chr6 99933331 99933541 + 9.19 0.000 intron (NM_001040179, intron 5 of 5) intron (NM_001040179, intron 5 of 5) -60602 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr3-2430 chr3 11719500 11719710 + 9.19 0.000 intron (NM_014667, intron 1 of 5) CpG 934 NM_001284390 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr18-1238 chr18 48960658 48960868 + 9.19 0.000 Intergenic Intergenic -10052 NM_001190821 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chrX-4500 chrX 65274274 65274484 + 9.19 0.000 Intergenic L1M2c|LINE|L1 -214356 NM_001010888 340554 Hs.21249 NM_001010888 ENSG00000102053 ZC3H12B CXorf32|MCPIP2 zinc finger CCCH-type containing 12B protein-coding chrX-3245 chrX 75073980 75074190 + 9.19 0.000 intron (NM_001271699, intron 5 of 14) intron (NM_001271699, intron 5 of 14) 82198 NM_001271698 22 Hs.370480 NM_004299 ENSG00000131269 ABCB7 ABC7|ASAT|Atm1p|EST140535 ATP binding cassette subfamily B member 7 protein-coding chr4-1864 chr4 181959268 181959478 + 9.19 0.000 Intergenic L2b|LINE|L2 -129400 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr7-3076 chr7 1424981 1425191 + 9.19 0.000 Intergenic AluJr|SINE|Alu 34384 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr3-4164 chr3 126081629 126081839 + 9.19 0.000 intron (NM_001008486, intron 1 of 10) intron (NM_001008486, intron 1 of 10) 2557 NM_001008486 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chr20-2759 chr20 51179174 51179384 + 9.19 0.000 Intergenic MIR|SINE|MIR -156172 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr9-3552 chr9 38393296 38393506 + 9.19 0.000 intron (NM_000692, intron 1 of 1) MIRc|SINE|MIR 699 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr20-2570 chr20 37054648 37054858 + 9.19 0.000 intron (NM_002895, intron 11 of 21) AluSx1|SINE|Alu 41244 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr17-2372 chr17 75723172 75723382 + 9.19 0.000 intron (NM_001005731, intron 1 of 38) intron (NM_001005731, intron 1 of 38) -1419 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr17-2016 chr17 2635855 2636065 + 9.19 0.000 intron (NM_000430, intron 1 of 10) AluJb|SINE|Alu 42306 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr3-3062 chr3 128475162 128475372 + 9.19 0.000 Intergenic Intergenic -8019 NM_153330 165721 Hs.518241 NM_153330 ENSG00000179407 DNAJB8 CT156|DJ6 DnaJ heat shock protein family (Hsp40) member B8 protein-coding chr2-8744 chr2 160993744 160993954 + 9.19 0.000 Intergenic Intergenic -143106 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr1-6929 chr1 153598825 153599035 + 9.19 0.000 Intergenic Intergenic 10425 NM_001317007 140576 Hs.515714 NM_080388 ENSG00000188643 S100A16 AAG13|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding chr11-1651 chr11 118608430 118608640 + 9.19 0.000 intron (NM_001144759, intron 1 of 20) CpG 920 NM_001144758 23187 Hs.504062 NM_015157 ENSG00000019144 PHLDB1 LL5A pleckstrin homology like domain family B member 1 protein-coding chrX-1272 chrX 108163242 108163452 + 9.19 0.000 intron (NM_001287760, intron 38 of 42) intron (NM_001287760, intron 38 of 42) 71569 NM_052936 115201 Hs.8763 NM_052936 ENSG00000101844 ATG4A APG4A|AUTL2 autophagy related 4A cysteine peptidase protein-coding chr22-2686 chr22 37180365 37180575 + 9.19 0.000 3' UTR (NM_001365878, exon 5 of 5) 3' UTR (NM_001365878, exon 5 of 5) -5352 NM_001346222 3560 Hs.474787 NM_000878 ENSG00000100385 IL2RB CD122|IL15RB|P70-75 interleukin 2 receptor subunit beta protein-coding chr14-3309 chr14 85764889 85765099 + 9.19 0.000 Intergenic Intergenic -169684 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr5-6855 chr5 118529607 118529817 + 9.19 0.000 intron (NR_104610, intron 1 of 9) intron (NR_104610, intron 1 of 9) 32405 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chrX-368 chrX 40267061 40267271 + 9.19 0.000 intron (NR_110386, intron 1 of 2) CpG 4249 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr4-4812 chr4 107148961 107149171 + 9.19 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -112753 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr3-6240 chr3 67530042 67530252 + 9.19 0.000 intron (NM_001177599, intron 2 of 10) intron (NM_001177599, intron 2 of 10) 124467 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr16-4183 chr16 10910606 10910816 + 9.19 0.000 intron (NR_104444, intron 11 of 17) intron (NR_104444, intron 11 of 17) 31757 NM_014015 28955 Hs.592051 NM_014015 ENSG00000182108 DEXI MYLE Dexi homolog protein-coding chrX-3645 chrX 99226036 99226246 + 9.19 0.000 Intergenic LTR1D1|LTR|ERV1 1184132 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr11-5791 chr11 5808520 5808730 + 9.19 0.000 Intergenic HERVI-int|LTR|ERV1 -11711 NM_001005174 390077 Hs.553737 NM_001005174 ENSG00000180988 OR52N2 OR11-57 olfactory receptor family 52 subfamily N member 2 protein-coding chr18-2291 chr18 77119684 77119894 + 9.19 0.000 intron (NM_001025100, intron 1 of 3) intron (NM_001025100, intron 1 of 3) 12994 NM_001025100 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr1-10275 chr1 147396261 147396471 + 9.19 0.000 intron (NR_038423, intron 3 of 3) L1MD1|LINE|L1 121509 NR_038423 100289211 Hs.323484 NR_038423 ENSG00000278811 LINC00624 - long intergenic non-protein coding RNA 624 ncRNA chr4-4113 chr4 6602027 6602237 + 9.19 0.000 intron (NM_001292038, intron 10 of 18) intron (NM_001292038, intron 10 of 18) 26943 NM_015274 23324 Hs.188464 NM_015274 ENSG00000013288 MAN2B2 - mannosidase alpha class 2B member 2 protein-coding chr8-4320 chr8 98941180 98941390 + 9.19 0.000 intron (NM_001256312, intron 1 of 12) CpG 1325 NM_001256312 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr6-8477 chr6 156449339 156449549 + 9.19 0.000 Intergenic Intergenic 70694 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr3-6367 chr3 87508840 87509050 + 9.19 0.000 Intergenic MER103C|DNA|hAT-Charlie -232361 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr1-14880 chr1 81372159 81372369 + 9.19 0.000 intron (NM_001366003, intron 2 of 27) intron (NM_001366003, intron 2 of 27) 65869 NM_001366008 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr20-4412 chr20 59423444 59423654 + 9.19 0.000 Intergenic Intergenic 122938 NM_001302455 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding chr1-16674 chr1 244150168 244150378 + 9.19 0.000 Intergenic Intergenic 97068 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chrX-5411 chrX 153170718 153170928 + 9.19 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -8461 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chr1-8490 chr1 148336802 148337012 + 9.19 0.000 Intergenic L1ME4a|LINE|L1 -2353 NR_049810 100847044 NR_049810 ENSG00000283676 MIR5087 - microRNA 5087 ncRNA chr8-2415 chr8 90547906 90548116 + 9.19 0.000 Intergenic Intergenic 58052 NR_104062 101937451 Hs.583685 NR_104062 ENSG00000253799 LINC01030 - long intergenic non-protein coding RNA 1030 ncRNA chr7-6145 chr7 124566703 124566913 + 9.19 0.000 Intergenic Intergenic 198984 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr8-3384 chr8 59209253 59209463 + 9.19 0.000 Intergenic L1PA16|LINE|L1 90148 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr7-9071 chr7 104442496 104442706 + 9.19 0.000 intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 113945 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr19-4159 chr19 38139755 38139965 + 9.19 0.000 intron (NM_015073, intron 10 of 21) MLT1A1|LTR|ERVL-MaLR -23236 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr13-3639 chr13 31128606 31128816 + 9.19 0.000 Intergenic Intergenic 33193 NM_006644 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr12-8174 chr12 121849954 121850164 + 9.19 0.000 intron (NM_002150, intron 7 of 13) L2b|LINE|L2 8800 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr3-6834 chr3 148355257 148355467 + 9.19 0.000 intron (NR_146712, intron 3 of 4) MIRb|SINE|MIR 74471 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr9-5361 chr9 90268782 90268992 + 9.19 0.000 Intergenic Intergenic 164602 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr12-6993 chr12 30622833 30623043 + 9.19 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 54306 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr5-3880 chr5 144698894 144699104 + 9.19 0.000 Intergenic Intergenic 493608 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr3-6717 chr3 135160555 135160765 + 9.19 0.000 intron (NM_004441, intron 6 of 15) intron (NM_004441, intron 6 of 15) 365400 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr7-8025 chr7 18939910 18940120 + 9.19 0.000 intron (NM_058176, intron 22 of 22) intron (NM_058176, intron 22 of 22) 177621 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr7-8329 chr7 42234023 42234233 + 9.19 0.000 intron (NM_000168, intron 1 of 14) intron (NM_000168, intron 1 of 14) 3081 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr8-4434 chr8 110778944 110779154 + 9.19 0.000 Intergenic L1PA10|LINE|L1 248384 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr7-5715 chr7 70509988 70510198 + 9.19 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -622051 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr6-6739 chr6 2516822 2517032 + 9.19 0.000 Intergenic Intergenic -117573 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr22-932 chr22 38843381 38843591 + 9.19 0.000 exon (NM_014293, exon 1 of 5) exon (NM_014293, exon 1 of 5) 542 NM_014293 23467 Hs.91622 NM_014293 ENSG00000221890 NPTXR NPR neuronal pentraxin receptor protein-coding chr14-4140 chr14 74338327 74338537 + 9.19 0.000 Intergenic Intergenic -10039 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr1-6763 chr1 76035077 76035287 + 9.19 0.000 Intergenic Intergenic 23858 NR_125939 101927342 Hs.216363 NR_125939 LOC101927342 - uncharacterized LOC101927342 ncRNA chr19-4563 chr19 10699775 10699985 + 9.19 0.000 Intergenic Intergenic -1559 NM_031209 81890 Hs.631638 NM_031209 ENSG00000213339 QTRT1 FP3235|TGT|TGUT queuine tRNA-ribosyltransferase catalytic subunit 1 protein-coding chr8-4175 chr8 80254713 80254923 + 9.19 0.000 Intergenic Intergenic 13429 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA chr13-2395 chr13 42064409 42064619 + 9.19 0.000 intron (NM_178009, intron 1 of 29) L2a|LINE|L2 15866 NM_178009 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr6-2966 chr6 37628779 37628989 + 9.19 0.000 Intergenic Intergenic 68999 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr4-8467 chr4 156972015 156972225 + 9.19 0.000 promoter-TSS (NR_036641) promoter-TSS (NR_036641) -321 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr6-4998 chr6 108537200 108537410 + 9.19 0.000 Intergenic L2a|LINE|L2 -22520 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr10-3143 chr10 68176360 68176570 + 9.19 0.000 intron (NR_045662, intron 12 of 19) intron (NR_045662, intron 12 of 19) 55648 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding chr14-3216 chr14 74240332 74240542 + 9.19 0.000 intron (NM_182894, intron 1 of 4) CpG 988 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr1-15311 chr1 118565412 118565622 + 9.19 0.000 Intergenic MIRb|SINE|MIR -380289 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr3-7221 chr3 193993309 193993519 + 9.19 0.000 non-coding (NR_027764, exon 1 of 1) non-coding (NR_027764, exon 1 of 1) 824 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo chr2-10900 chr2 70041927 70042137 + 9.19 0.000 intron (NR_033872, intron 6 of 10) intron (NR_033872, intron 6 of 10) 44983 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA chr15-2461 chr15 82651657 82651867 + 9.19 0.000 intron (NR_046096, intron 3 of 3) L1ME3G|LINE|L1 -2967 NM_001365246 64506 Hs.459132 NM_030594 ENSG00000214575 CPEB1 CPE-BP1|CPEB|CPEB-1|h-CPEB|hCPEB-1 cytoplasmic polyadenylation element binding protein 1 protein-coding chr2-7365 chr2 2092670 2092880 + 9.19 0.000 intron (NM_015025, intron 3 of 24) Tigger17a|DNA|TcMar-Tigger -226457 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr14-3002 chr14 53285793 53286003 + 9.19 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 132544 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr12-6270 chr12 45166154 45166364 + 9.19 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 49747 NR_037144 51054 Hs.233495 NM_015899 ENSG00000134297 PLEKHA8P1 FAPP-2|FAPP2|PLEKHA8|PLEKHA9|hFAPP2 pleckstrin homology domain containing A8 pseudogene 1 pseudo chr7-2540 chr7 74021951 74022161 + 9.19 0.000 Intergenic Intergenic -5733 NM_001278918 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr20-2343 chr20 13306933 13307143 + 9.19 0.000 Intergenic Intergenic -67351 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr8-4203 chr8 85044222 85044432 + 9.19 0.000 Intergenic L2c|LINE|L2 -62911 NM_033402 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chr3-5930 chr3 43344771 43344981 + 9.19 0.000 intron (NM_001100594, intron 5 of 5) intron (NM_001100594, intron 5 of 5) 7086 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chr7-8887 chr7 91929468 91929678 + 9.19 0.000 Intergenic L1MC5a|LINE|L1 -11289 NM_147185 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chrX-945 chrX 50436595 50436805 + 9.19 0.000 intron (NM_001013742, intron 1 of 27) MIRc|SINE|MIR 34125 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr11-2343 chr11 76086925 76087135 + 9.19 0.000 intron (NM_003369, intron 13 of 14) intron (NM_003369, intron 13 of 14) 119472 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr14-3580 chr14 105502168 105502378 + 9.19 0.000 Intergenic AluJb|SINE|Alu 11024 NM_001134876 283643 Hs.720306 NM_173608 ENSG00000185347 TEDC1 C14orf80 tubulin epsilon and delta complex 1 protein-coding chr2-4407 chr2 88469580 88469790 + 9.19 0.000 Intergenic (ACTCT)n|Simple_repeat|Simple_repeat -16992 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr7-3899 chr7 114121638 114121848 + 9.19 0.000 intron (NR_033766, intron 1 of 19) L3|LINE|CR1 35416 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr6-3578 chr6 69693804 69694014 + 9.19 0.000 intron (NM_001367272, intron 14 of 15) intron (NM_001367272, intron 14 of 15) 102557 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr2-6169 chr2 240724721 240724931 + 9.19 0.000 intron (NM_004321, intron 38 of 46) intron (NM_004321, intron 38 of 46) 32960 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr16-3853 chr16 67929326 67929536 + 9.19 0.000 TTS (NM_001907) TTS (NM_001907) 2431 NM_001907 1506 Hs.654546 NM_001907 ENSG00000141086 CTRL CTRL1 chymotrypsin like protein-coding chr16-3553 chr16 53776267 53776477 + 9.19 0.000 intron (NM_001363897, intron 1 of 7) intron (NM_001363897, intron 1 of 7) 72216 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr12-6850 chr12 15779738 15779948 + 9.19 0.000 intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 9545 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr8-6815 chr8 96987304 96987514 + 9.19 0.000 intron (NM_016134, intron 5 of 7) intron (NM_016134, intron 5 of 7) 290519 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr5-4133 chr5 83568152 83568362 + 9.19 0.000 intron (NM_001164098, intron 11 of 13) intron (NM_001164098, intron 11 of 13) -5943 NR_136215 105379054 Hs.643801 NR_136215 ENSG00000249835 VCAN-AS1 - VCAN antisense RNA 1 ncRNA chrX-4056 chrX 19070595 19070805 + 9.19 0.000 intron (NM_001184833, intron 2 of 27) intron (NM_001184833, intron 2 of 27) 51768 NM_001079860 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr9-7364 chr9 16594622 16594832 + 9.19 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -132087 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr12-4143 chr12 77354724 77354934 + 9.19 0.000 Intergenic Intergenic -289260 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr2-13635 chr2 159897345 159897555 + 9.19 0.000 intron (NM_002349, intron 2 of 34) intron (NM_002349, intron 2 of 34) 7306 NM_002349 4065 Hs.153563 NM_002349 ENSG00000054219 LY75 CD205|CLEC13B|DEC-205|GP200-MR6|LY-75 lymphocyte antigen 75 protein-coding chr2-6671 chr2 14329060 14329270 + 9.19 0.000 intron (NR_103814, intron 1 of 3) L2|LINE|L2 71793 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr11-3949 chr11 681724 681934 + 9.19 0.000 intron (NM_001367390, intron 6 of 11) L1M4b|LINE|L1 -13762 NM_001042463 283232 Hs.448664 NM_174940 ENSG00000177042 TMEM80 - transmembrane protein 80 protein-coding chr2-12963 chr2 103435076 103435286 + 9.19 0.000 Intergenic Intergenic -450752 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr12-7362 chr12 56572521 56572731 + 9.19 0.000 intron (NM_002898, intron 5 of 13) MIRc|SINE|MIR 50806 NM_002898 5939 Hs.505729 NM_002898 ENSG00000076067 RBMS2 SCR3 RNA binding motif single stranded interacting protein 2 protein-coding chrX-5027 chrX 119654232 119654442 + 9.19 0.000 intron (NM_145799, intron 3 of 10) (TCAGC)n|Simple_repeat|Simple_repeat -7489 NR_030413 768218 NR_030413 ENSG00000211578 MIR766 MIRN766|hsa-mir-766|mir-766 microRNA 766 ncRNA chr2-9068 chr2 201890382 201890592 + 9.19 0.000 intron (NM_001261435, intron 12 of 13) intron (NM_001261435, intron 12 of 13) 83908 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr11-4469 chr11 105479247 105479457 + 9.19 0.000 Intergenic THE1B|LTR|ERVL-MaLR -130721 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr10-7600 chr10 20171894 20172104 + 9.19 0.000 intron (NM_032812, intron 7 of 13) L1PB4|LINE|L1 355567 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr3-5597 chr3 8638113 8638323 + 9.19 0.000 intron (NM_001256749, intron 1 of 11) intron (NM_001256749, intron 1 of 11) 6580 NR_046358 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr3-7188 chr3 189081218 189081428 + 9.19 0.000 Intergenic L2|LINE|L2 -90648 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr5-4035 chr5 37882666 37882876 + 9.19 0.000 Intergenic Intergenic 42333 NR_103441 100861519 Hs.536820 NM_001278094 GDNF-AS1 GDNFOS GDNF antisense RNA 1 ncRNA chr9-4666 chr9 120761420 120761630 + 9.19 0.000 3' UTR (NM_012164, exon 8 of 8) 3' UTR (NM_012164, exon 8 of 8) 31891 NM_012164 26190 Hs.494985 NM_012164 ENSG00000119402 FBXW2 FBW2|Fwd2|Md6 F-box and WD repeat domain containing 2 protein-coding chr11-2143 chr11 47993614 47993824 + 9.19 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) 13160 NM_001098503 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr20-1250 chr20 37512272 37512482 + 9.19 0.000 Intergenic MIRc|SINE|MIR 7926 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr4-6876 chr4 11690363 11690573 + 9.19 0.000 Intergenic Intergenic 79000 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr1-7060 chr1 181136120 181136330 + 9.19 0.000 Intergenic Tigger16a|DNA|TcMar-Tigger -38259 NR_125966 101928973 Hs.637822 NR_125966 ENSG00000237292 LINC01732 - long intergenic non-protein coding RNA 1732 ncRNA chr12-4584 chr12 31558639 31558849 + 9.19 0.000 intron (NM_001308339, intron 1 of 22) intron (NM_001308339, intron 1 of 22) -31179 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr17-3902 chr17 50837523 50837733 + 9.19 0.000 intron (NM_175575, intron 1 of 1) intron (NM_175575, intron 1 of 1) 2042 NM_175575 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr14-3415 chr14 96035658 96035868 + 9.19 0.000 Intergenic L1MD1|LINE|L1 -3561 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr8-3360 chr8 46935050 46935260 + 9.19 0.000 Intergenic Intergenic 94269 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr6-8575 chr6 164125787 164125997 + 9.19 0.000 Intergenic L1MA4|LINE|L1 -454408 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr2-7827 chr2 46588722 46588932 + 9.19 0.000 intron (NM_173074, intron 5 of 6) intron (NM_173074, intron 5 of 6) -8589 NR_104182 100506142 Hs.658541 NR_104182 ENSG00000250116 LOC100506142 - uncharacterized LOC100506142 ncRNA chr1-14975 chr1 89470387 89470597 + 9.19 0.000 Intergenic Intergenic -54337 NM_001134476 23507 Hs.482017 NM_015350 ENSG00000197147 LRRC8B TA-LRRP|TALRRP leucine rich repeat containing 8 VRAC subunit B protein-coding chr5-3803 chr5 82745224 82745434 + 9.19 0.000 Intergenic Intergenic -94826 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr10-8503 chr10 90432679 90432889 + 9.19 0.000 intron (NR_110657, intron 3 of 6) intron (NR_110657, intron 3 of 6) 108021 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr6-3811 chr6 34038902 34039112 + 9.19 0.000 intron (NM_000841, intron 8 of 10) intron (NM_000841, intron 8 of 10) -38956 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr13-1766 chr13 113083514 113083724 + 9.19 0.000 intron (NM_001366646, intron 15 of 27) intron (NM_001366646, intron 15 of 27) -22169 NM_000131 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr1-6579 chr1 34613671 34613881 + 9.19 0.000 Intergenic Intergenic 55918 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr2-8240 chr2 97935916 97936126 + 9.19 0.000 intron (NM_015348, intron 1 of 40) L1M4|LINE|L1 59927 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chrX-3356 chrX 139520246 139520456 + 9.19 0.000 Intergenic L1PA16|LINE|L1 -10385 NM_001313913 2158 Hs.522798 NM_000133 ENSG00000101981 F9 F9 p22|FIX|HEMB|P19|PTC|THPH8 coagulation factor IX protein-coding chr16-3917 chr16 83975400 83975610 + 9.19 0.000 intron (NM_019065, intron 2 of 12) intron (NM_019065, intron 2 of 12) 6857 NM_001329749 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr4-2233 chr4 147768021 147768231 + 9.19 0.000 intron (NM_024605, intron 1 of 22) L2c|LINE|L2 -14469 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr14-3863 chr14 85110877 85111087 + 9.19 0.000 Intergenic Intergenic -160950 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr20-2463 chr20 31764730 31764940 + 9.19 0.000 intron (NM_012112, intron 4 of 17) intron (NM_012112, intron 4 of 17) 25545 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr7-7028 chr7 131708003 131708213 + 9.19 0.000 Intergenic L1MEd|LINE|L1 -151480 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr5-2522 chr5 159451209 159451419 + 9.19 0.000 intron (NR_027110, intron 6 of 6) intron (NR_027110, intron 6 of 6) 14962 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr5-9105 chr5 173163287 173163497 + 9.19 0.000 intron (NM_013980, intron 5 of 5) intron (NM_013980, intron 5 of 5) 18861 NM_013979 662 Hs.145726 NM_001205 ENSG00000113734 BNIP1 NIP1|SEC20|TRG-8 BCL2 interacting protein 1 protein-coding chr17-4577 chr17 82520843 82521053 + 9.19 0.000 intron (NM_004514, intron 1 of 8) intron (NM_004514, intron 1 of 8) 1216 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr6-4477 chr6 36233556 36233766 + 9.19 0.000 TTS (NM_015695) TTS (NM_015695) -9507 NM_173676 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr4-5128 chr4 152052517 152052727 + 9.19 0.000 Intergenic HAL1|LINE|L1 -48131 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr12-7798 chr12 97921961 97922171 + 9.19 0.000 Intergenic L2|LINE|L2 17055 NR_039716 100616287 NR_039716 ENSG00000265861 MIR4495 - microRNA 4495 ncRNA chr10-5372 chr10 73880290 73880500 + 9.19 0.000 Intergenic L2a|LINE|L2 -5804 NM_001320898 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr1-6281 chr1 1122805 1123015 + 9.19 0.000 Intergenic Intergenic -6821 NM_001330306 54991 Hs.235095 NM_017891 ENSG00000131591 C1orf159 - chromosome 1 open reading frame 159 protein-coding chr13-1927 chr13 77754250 77754460 + 9.19 0.000 intron (NM_001242868, intron 5 of 6) MIRb|SINE|MIR 13136 NM_001366666 122060 Hs.349955 NM_144595 ENSG00000139737 SLAIN1 C13orf32 SLAIN motif family member 1 protein-coding chr6-3772 chr6 16746738 16746948 + 9.19 0.000 intron (NR_152112, intron 1 of 1) intron (NR_152112, intron 1 of 1) 13341 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr12-1842 chr12 31590357 31590567 + 9.19 0.000 promoter-TSS (NM_001308339) promoter-TSS (NM_001308339) -20 NM_001308339 160518 Hs.118166 NM_144973 ENSG00000170456 DENND5B - DENN domain containing 5B protein-coding chr10-7879 chr10 48955794 48956004 + 9.19 0.000 intron (NM_020945, intron 51 of 61) intron (NM_020945, intron 51 of 61) 29688 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr5-2500 chr5 150601027 150601237 + 9.19 0.000 promoter-TSS (NM_001166208) promoter-TSS (NM_001166208) 56 NM_001166208 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chrX-1467 chrX 112852094 112852304 + 9.19 0.000 Intergenic Intergenic -11368 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chr19-3154 chr19 33496326 33496536 + 9.19 0.000 intron (NM_001166057, intron 2 of 12) intron (NM_001166057, intron 2 of 12) 25360 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr4-8179 chr4 131290961 131291171 + 9.19 0.000 Intergenic HUERS-P1-int|LTR|ERV1 -473772 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr1-6746 chr1 67500489 67500699 + 9.19 0.000 Intergenic Intergenic -70192 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr3-10070 chr3 108052513 108052723 + 9.19 0.000 intron (NM_198793, intron 7 of 8) intron (NM_198793, intron 7 of 8) 38470 NM_198793 961 Hs.446414 NM_001777 ENSG00000196776 CD47 IAP|MER6|OA3 CD47 molecule protein-coding chr8-6055 chr8 25044888 25045098 + 9.19 0.000 Intergenic Intergenic -88124 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr5-2356 chr5 78467923 78468133 + 9.19 0.000 intron (NR_110885, intron 7 of 7) intron (NR_110885, intron 7 of 7) 107411 NM_001290229 9522 Hs.482587 NM_004866 ENSG00000085365 SCAMP1 SCAMP|SCAMP37 secretory carrier membrane protein 1 protein-coding chr7-6274 chr7 136166500 136166710 + 9.19 0.000 Intergenic Intergenic -189246 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr8-6205 chr8 36663830 36664040 + 9.19 0.000 Intergenic THE1B|LTR|ERVL-MaLR -120439 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr10-6671 chr10 107162660 107162870 + 9.19 0.000 intron (NM_001206569, intron 1 of 25) intron (NM_001206569, intron 1 of 25) 1941 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr11-4663 chr11 55856777 55856987 + 9.19 0.000 Intergenic MER61A|LTR|ERV1 18130 NM_001005496 390144 Hs.554527 NM_001005496 ENSG00000205029 OR5D16 OR11-154 olfactory receptor family 5 subfamily D member 16 protein-coding chr16-5599 chr16 55430215 55430425 + 9.19 0.000 intron (NR_147198, intron 4 of 6) intron (NR_147198, intron 4 of 6) 31977 NR_147198 107984884 Hs.666473 NR_147198 MMP2-AS1 - MMP2 antisense RNA 1 ncRNA chr20-2441 chr20 24651076 24651286 + 9.19 0.000 intron (NM_024893, intron 3 of 3) intron (NM_024893, intron 3 of 3) 181220 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr9-4338 chr9 128209465 128209675 + 9.19 0.000 intron (NM_001288739, intron 1 of 21) MER115|DNA|hAT-Tip100 -5348 NM_001131015 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr13-2069 chr13 59342162 59342372 + 9.19 0.000 Intergenic Intergenic -670451 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr11-3086 chr11 20048348 20048558 + 9.19 0.000 intron (NM_182964, intron 14 of 37) intron (NM_182964, intron 14 of 37) 850 NR_046672 100874014 Hs.557916 NR_046672 ENSG00000254453 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA chr16-3116 chr16 69998021 69998231 + 9.19 0.000 intron (NR_003610, intron 16 of 25) intron (NR_003610, intron 16 of 25) -32220 NR_036054 100302243 NR_036054 ENSG00000238728 MIR1972-1 MIR1972|hsa-mir-1972|hsa-mir-1972-1 microRNA 1972-1 ncRNA chr8-1640 chr8 114712056 114712266 + 9.19 0.000 Intergenic AluY|SINE|Alu 955852 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr3-6884 chr3 154034795 154035005 + 9.19 0.000 intron (NR_037901, intron 2 of 3) intron (NR_037901, intron 2 of 3) -86103 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr3-6858 chr3 150851862 150852072 + 9.19 0.000 Intergenic MER57B2|LTR|ERV1 53472 NM_001351281 646951 Hs.380222 NM_001351281 MINDY4B C3orf76|FAM188B2 MINDY family member 4B protein-coding chr3-8981 chr3 16657247 16657457 + 9.19 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -51929 NM_001351 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr4-3540 chr4 168528332 168528542 + 9.19 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) 31385 NM_016081 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr5-7649 chr5 52579418 52579628 + 9.19 0.000 Intergenic Intergenic -208393 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr5-5096 chr5 98768177 98768387 + 9.19 0.000 promoter-TSS (NM_001366510) promoter-TSS (NM_001366510) -350 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr13-2742 chr13 97313791 97314001 + 9.19 0.000 intron (NM_144778, intron 2 of 8) intron (NM_144778, intron 2 of 8) 91563 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr1-8531 chr1 156929760 156929970 + 9.19 0.000 intron (NM_144702, intron 11 of 14) intron (NM_144702, intron 11 of 14) 6379 NR_030527 768220 NR_030527 ENSG00000211581 MIR765 MIRN765|hsa-mir-765|mir-765 microRNA 765 ncRNA chr9-7237 chr9 2501274 2501484 + 9.19 0.000 Intergenic LTR33|LTR|ERVL -120408 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr3-2316 chr3 127696164 127696374 + 9.19 0.000 intron (NM_001256585, intron 5 of 6) intron (NM_001256585, intron 5 of 6) 23317 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr6-7848 chr6 105080020 105080230 + 9.19 0.000 3' UTR (NM_001004317, exon 4 of 4) 3' UTR (NM_001004317, exon 4 of 4) 56221 NM_147147 11149 Hs.221660 NM_007073 ENSG00000112276 BVES CARICK|HBVES|LGMD2X|LGMDR25|POP1|POPDC1 blood vessel epicardial substance protein-coding chr2-9057 chr2 200847374 200847584 + 9.19 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 17082 NM_001162407 1195 Hs.433732 NM_004071 ENSG00000013441 CLK1 CLK|CLK/STY|STY CDC like kinase 1 protein-coding chr17-4684 chr17 27816894 27817104 + 9.19 0.000 Intergenic AluSx1|SINE|Alu -16470 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr9-2468 chr9 35554023 35554233 + 9.19 0.000 intron (NM_014806, intron 2 of 11) intron (NM_014806, intron 2 of 11) 9750 NM_001287239 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr1-10931 chr1 211448029 211448239 + 9.19 0.000 Intergenic L1MA1|LINE|L1 44783 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr8-6677 chr8 80860627 80860837 + 9.19 0.000 intron (NM_001033723, intron 1 of 8) intron (NM_001033723, intron 1 of 8) 13736 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr6-4516 chr6 37913245 37913455 + 9.19 0.000 intron (NM_021943, intron 1 of 5) Tigger1|DNA|TcMar-Tigger 93623 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr14-3075 chr14 62028881 62029091 + 9.19 0.000 intron (NM_001367661, intron 4 of 8) intron (NM_001367661, intron 4 of 8) -88371 NR_015358 646113 Hs.445241 NM_001039785 LINC00643 - long intergenic non-protein coding RNA 643 ncRNA chr10-3653 chr10 99997137 99997347 + 9.19 0.000 intron (NM_015221, intron 1 of 16) intron (NM_015221, intron 1 of 16) 12705 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr15-1689 chr15 60444100 60444310 + 9.19 0.000 intron (NR_147171, intron 11 of 16) intron (NR_147171, intron 11 of 16) 34937 NM_024611 79664 Hs.200943 NM_024611 ENSG00000128915 ICE2 BRCC1|NARG2 interactor of little elongation complex ELL subunit 2 protein-coding chr11-3730 chr11 23359337 23359547 + 9.19 0.000 Intergenic Intergenic 59748 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA GL000194.1-5 GL000194.1 78972 79182 + 9.19 0.000 NA NA NA NA chr10-3146 chr10 69172449 69172659 + 9.19 0.000 3' UTR (NM_004896, exon 9 of 9) 3' UTR (NM_004896, exon 9 of 9) -7680 NM_001301683 6832 Hs.106469 NM_003171 ENSG00000156502 SUPV3L1 SUV3 Suv3 like RNA helicase protein-coding chr3-3324 chr3 194382810 194383020 + 9.19 0.000 Intergenic Intergenic -13172 NM_001135057 131578 Hs.288467 NM_130830 ENSG00000172061 LRRC15 LIB leucine rich repeat containing 15 protein-coding chr4-4613 chr4 77878213 77878423 + 9.19 0.000 intron (NM_020236, intron 2 of 8) intron (NM_020236, intron 2 of 8) 15488 NM_020236 65008 Hs.532019 NM_020236 ENSG00000169288 MRPL1 BM022|L1MT|MRP-L1 mitochondrial ribosomal protein L1 protein-coding chr8-3333 chr8 37041195 37041405 + 9.19 0.000 Intergenic L2a|LINE|L2 256926 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr3-3194 chr3 187917531 187917741 + 9.19 0.000 Intergenic Intergenic 58771 NR_135537 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr3-5025 chr3 30473721 30473931 + 9.19 0.000 Intergenic Intergenic -45042 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr14-2903 chr14 37902138 37902348 + 9.19 0.000 promoter-TSS (NR_135286) promoter-TSS (NR_135286) -119 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr19-4900 chr19 41380332 41380542 + 9.19 0.000 intron (NM_001369862, intron 2 of 4) MLT1G|LTR|ERVL-MaLR 3173 NM_001042595 641649 Hs.709417 NM_001042595 ENSG00000142046 TMEM91 DSPC3|IFITMD6 transmembrane protein 91 protein-coding chr15-4030 chr15 61196695 61196905 + 9.19 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 32502 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr12-4919 chr12 67754772 67754982 + 9.19 0.000 Intergenic Intergenic -25402 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr15-2192 chr15 88830000 88830210 + 9.19 0.000 intron (NM_001369268, intron 1 of 18) L2b|LINE|L2 26662 NM_001135 176 Hs.2159 NM_001135 ENSG00000157766 ACAN AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD aggrecan protein-coding chr11-4993 chr11 72736636 72736846 + 9.19 0.000 intron (NM_001040118, intron 1 of 34) intron (NM_001040118, intron 1 of 34) -14383 NM_015242 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr2-10454 chr2 213474782 213474992 + 9.19 0.000 intron (NR_047660, intron 8 of 14) MLT2A1|LTR|ERVL 190423 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr5-948 chr5 93621302 93621512 + 9.19 0.000 promoter-TSS (NR_031754) promoter-TSS (NR_031754) -619 NR_031754 100313887 NR_031754 ENSG00000284336 MIR2277 mir-2277 microRNA 2277 ncRNA chr9-3986 chr9 137742677 137742887 + 9.19 0.000 intron (NM_001354263, intron 4 of 26) intron (NM_001354263, intron 4 of 26) 45624 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr3-6790 chr3 143775479 143775689 + 9.19 0.000 intron (NM_173653, intron 4 of 15) intron (NM_173653, intron 4 of 15) 72884 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr1-9670 chr1 48718768 48718978 + 9.19 0.000 intron (NR_136623, intron 5 of 12) intron (NR_136623, intron 5 of 12) 58018 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr8-5947 chr8 19844412 19844622 + 9.19 0.000 intron (NR_148453, intron 14 of 15) intron (NR_148453, intron 14 of 15) 27101 NM_018142 55174 Hs.512627 NM_018142 ENSG00000104613 INTS10 C8orf35|INT10 integrator complex subunit 10 protein-coding chr14-3277 chr14 81288344 81288554 + 9.19 0.000 intron (NM_001366850, intron 5 of 7) Tigger3a|DNA|TcMar-Tigger -67059 NM_201595 2957 Hs.592334 NM_015859 ENSG00000165417 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA subunit 1 protein-coding chr11-9249 chr11 42552698 42552908 + 9.19 0.000 Intergenic MLT2C1|LTR|ERVL -299113 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr6-1846 chr6 11473333 11473543 + 9.19 0.000 Intergenic Intergenic -64311 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr9-2970 chr9 13275131 13275341 + 9.19 0.000 intron (NM_001330637, intron 1 of 46) MLT1B|LTR|ERVL-MaLR 4328 NM_001261406 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr1-8607 chr1 188165677 188165887 + 9.19 0.000 Intergenic Intergenic 722154 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr19-4018 chr19 3977597 3977807 + 9.19 0.000 intron (NM_001961, intron 12 of 14) CpG 4870 NR_002602 26812 NR_002602 ENSG00000206775 SNORD37 RNU37|U37 small nucleolar RNA, C/D box 37 snoRNA chr6-5327 chr6 144327232 144327442 + 9.19 0.000 intron (NM_007124, intron 1 of 73) intron (NM_007124, intron 1 of 73) 35600 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr17-3620 chr17 2020012 2020222 + 9.19 0.000 non-coding (NR_135642, exon 2 of 2) non-coding (NR_135642, exon 2 of 2) 2401 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr2-8971 chr2 190090726 190090936 + 9.19 0.000 Intergenic L2c|LINE|L2 -28102 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr18-1494 chr18 75479003 75479213 + 9.19 0.000 Intergenic Intergenic -51405 NM_001037331 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr10-3710 chr10 111281374 111281584 + 9.19 0.000 Intergenic Intergenic 167188 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr14-4704 chr14 58391206 58391416 + 9.19 0.000 Intergenic L1MC1|LINE|L1 -4619 NM_207377 387990 Hs.592307 NM_207377 ENSG00000196860 TOMM20L UNQ9438 translocase of outer mitochondrial membrane 20 like protein-coding chr10-8254 chr10 75313808 75314018 + 9.19 0.000 intron (NR_038226, intron 2 of 3) intron (NR_038226, intron 2 of 3) 17530 NR_038224 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA chr2-5226 chr2 46346684 46346894 + 9.19 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 47378 NR_146999 105374582 Hs.570163 NR_146999 ENSG00000228100 LINC01820 - long intergenic non-protein coding RNA 1820 ncRNA chr3-6233 chr3 66472716 66472926 + 9.19 0.000 intron (NM_015541, intron 1 of 18) intron (NM_015541, intron 1 of 18) 27600 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chrX-4193 chrX 35026279 35026489 + 9.19 0.000 Intergenic Intergenic 83588 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr8-1639 chr8 109841064 109841274 + 9.19 0.000 Intergenic L1ME3B|LINE|L1 134602 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr6-8617 chr6 169343201 169343411 + 9.19 0.000 Intergenic Intergenic -89192 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr5-3976 chr5 12766187 12766397 + 9.19 0.000 intron (NR_033383, intron 3 of 3) MSTA|LTR|ERVL-MaLR 98433 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr15-2013 chr15 47196095 47196305 + 9.19 0.000 intron (NM_001198999, intron 1 of 19) intron (NM_001198999, intron 1 of 19) 12111 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr14-5131 chr14 90156610 90156820 + 9.19 0.000 intron (NM_022054, intron 1 of 1) MIRb|SINE|MIR 94721 NM_022054 56659 Hs.510191 NM_022054 ENSG00000152315 KCNK13 K2p13.1|THIK-1|THIK1 potassium two pore domain channel subfamily K member 13 protein-coding chrX-3019 chrX 67427270 67427480 + 9.19 0.000 Intergenic L1PA7|LINE|L1 -116646 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr4-5009 chr4 138826911 138827121 + 9.19 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 185630 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr1-14916 chr1 84617989 84618199 + 9.19 0.000 intron (NR_125761, intron 2 of 2) intron (NR_125761, intron 2 of 2) 2937 NR_125761 103695366 Hs.576097 NR_125761 LINC01461 TCONS_00001552 long intergenic non-protein coding RNA 1461 ncRNA chr2-14186 chr2 206763389 206763599 + 9.19 0.000 intron (NR_104261, intron 1 of 9) L2c|LINE|L2 1834 NR_104261 130752 Hs.147816 NM_206892 ENSG00000138400 MDH1B RP11-95H11 malate dehydrogenase 1B protein-coding chrX-5352 chrX 149096375 149096585 + 9.19 0.000 Intergenic L1MA8|LINE|L1 377389 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr1-6496 chr1 22592970 22593180 + 9.19 0.000 intron (NM_020526, intron 5 of 16) intron (NM_020526, intron 5 of 16) 29586 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr4-4702 chr4 87841859 87842069 + 9.19 0.000 intron (NM_001184696, intron 4 of 4) MIRb|SINE|MIR 7261 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr10-4864 chr10 15354939 15355149 + 9.19 0.000 intron (NM_001010924, intron 1 of 7) intron (NM_001010924, intron 1 of 7) 16245 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr10-5794 chr10 106637209 106637419 + 9.19 0.000 intron (NM_001206569, intron 18 of 25) intron (NM_001206569, intron 18 of 25) 497149 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr10-2466 chr10 23037276 23037486 + 9.19 0.000 exon (NM_001282747, exon 16 of 16) exon (NM_001282747, exon 16 of 16) -58198 NM_012228 22921 Hs.461420 NM_012228 ENSG00000148450 MSRB2 CBS-1|CBS1|CGI-131|MSRB|PILB methionine sulfoxide reductase B2 protein-coding chr5-2951 chr5 152070582 152070792 + 9.19 0.000 intron (NR_109876, intron 1 of 2) intron (NR_109876, intron 1 of 2) 111789 NR_109876 101927115 Hs.549665 NR_109876 ENSG00000254226 LINC01933 CTB-12O2.1 long intergenic non-protein coding RNA 1933 ncRNA chrX-1910 chrX 146523402 146523612 + 9.19 0.000 Intergenic Intergenic -286264 NM_001244892 100133053 NM_001244892 ENSG00000235699 CXorf51B CXorf51A chromosome X open reading frame 51B protein-coding chr14-3367 chr14 92286763 92286973 + 9.19 0.000 Intergenic MER20B|DNA|hAT-Charlie -35713 NM_153648 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr7-5756 chr7 74778596 74778806 + 9.19 0.000 intron (NM_000265, intron 2 of 10) AluSz|SINE|Alu 4739 NM_000265 653361 Hs.647047 NM_000265 ENSG00000158517 NCF1 NCF1A|NOXO2|SH3PXD1A|p47phox neutrophil cytosolic factor 1 protein-coding chr11-6592 chr11 72675163 72675373 + 9.19 0.000 promoter-TSS (NM_002599) promoter-TSS (NM_002599) -846 NM_002599 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr12-1501 chr12 49942364 49942574 + 9.19 0.000 Intergenic Intergenic -8272 NM_000486 359 Hs.130730 NM_000486 ENSG00000167580 AQP2 AQP-CD|WCH-CD aquaporin 2 protein-coding chr6-3755 chr6 12912658 12912868 + 9.19 0.000 intron (NM_001322308, intron 3 of 13) AluJb|SINE|Alu -44593 NM_001322311 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr2-8420 chr2 118801310 118801520 + 9.19 0.000 Intergenic MER102c|DNA|hAT-Charlie 46768 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr1-10965 chr1 213915178 213915388 + 9.19 0.000 intron (NR_037850, intron 2 of 5) intron (NR_037850, intron 2 of 5) -9466 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr14-3247 chr14 76456657 76456867 + 9.19 0.000 intron (NM_004452, intron 4 of 10) intron (NM_004452, intron 4 of 10) 85415 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr7-8609 chr7 67586987 67587197 + 9.19 0.000 Intergenic Intergenic 251116 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr4-5739 chr4 54655600 54655810 + 9.19 0.000 Intergenic MamRep38|DNA|hAT -2223 NM_001093772 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr1-10022 chr1 87021625 87021835 + 9.19 0.000 intron (NM_012262, intron 1 of 6) AluJr|SINE|Alu 107095 NM_001134492 9653 Hs.743280 NM_012262 ENSG00000153936 HS2ST1 dJ604K5.2 heparan sulfate 2-O-sulfotransferase 1 protein-coding chr4-1708 chr4 176443179 176443389 + 9.19 0.000 Intergenic Intergenic 123318 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr12-3733 chr12 25333769 25333979 + 9.19 0.000 Intergenic Intergenic -82945 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr11-3087 chr11 20163379 20163589 + 9.19 0.000 Intergenic CpG -3009 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr1-12172 chr1 186304541 186304751 + 9.19 0.000 intron (NM_001303232, intron 5 of 11) intron (NM_001303232, intron 5 of 11) 8373 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr8-2273 chr8 98179306 98179516 + 9.19 0.000 Intergenic Intergenic 61571 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr6-7816 chr6 100774911 100775121 + 9.19 0.000 intron (NM_006828, intron 8 of 41) intron (NM_006828, intron 8 of 41) 106313 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr10-4017 chr10 4889661 4889871 + 9.19 0.000 intron (NR_026743, intron 4 of 10) intron (NR_026743, intron 4 of 10) 26507 NR_026743 389932 Hs.631812 NR_026743 AKR1C6P TAKR aldo-keto reductase family 1 member C6, pseudogene pseudo chrX-3666 chrX 103409759 103409969 + 9.19 0.000 Intergenic L2a|LINE|L2 32826 NM_014380 27018 Hs.448588 NM_014380 ENSG00000166681 BEX3 Bex|DXS6984E|HGR74|NADE|NGFRAP1 brain expressed X-linked 3 protein-coding chr1-8987 chr1 10329093 10329303 + 9.19 0.000 intron (NM_001365951, intron 27 of 48) intron (NM_001365951, intron 27 of 48) 30232 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr8-6433 chr8 60158423 60158633 + 9.19 0.000 Intergenic L1PBa1|LINE|L1 122872 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr11-2393 chr11 2320572 2320782 + 9.19 0.000 Intergenic Intergenic -17537 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr1-5408 chr1 16151943 16152153 + 9.19 0.000 intron (NM_004431, intron 1 of 16) intron (NM_004431, intron 1 of 16) 4021 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr13-2149 chr13 106802300 106802510 + 9.19 0.000 Intergenic Intergenic 148525 NR_047026 100874173 Hs.569297 NR_047026 ENSG00000230156 LINC00443 - long intergenic non-protein coding RNA 443 ncRNA chr12-7615 chr12 79453116 79453326 + 9.19 0.000 Intergenic LTR16|LTR|ERVL 33964 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr22-1266 chr22 28345512 28345722 + 9.19 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -114252 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr15-2512 chr15 38823605 38823815 + 9.19 0.000 Intergenic Intergenic 127112 NR_160786 chrX-5376 chrX 150553341 150553551 + 9.19 0.000 Intergenic Intergenic -15151 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr17-6433 chr17 7146334 7146544 + 9.19 0.000 Intergenic Intergenic -31628 NM_001201352 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chr7-2201 chr7 100881547 100881757 + 9.19 0.000 intron (NM_015908, intron 3 of 19) intron (NM_015908, intron 3 of 19) 6549 NM_001128854 51593 Hs.111801 NM_015908 ENSG00000087087 SRRT ARS2|ASR2|serrate serrate, RNA effector molecule protein-coding chr3-6712 chr3 134615655 134615865 + 9.19 0.000 intron (NM_001350860, intron 6 of 7) intron (NM_001350860, intron 6 of 7) 35258 NM_001366276 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr10-7454 chr10 7442325 7442535 + 9.19 0.000 Intergenic Intergenic -30944 NM_001029880 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr5-7402 chr5 25121432 25121642 + 9.19 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 69119 NR_147006 105374694 NR_147006 ENSG00000251273 LINC02228 - long intergenic non-protein coding RNA 2228 ncRNA chrX-4244 chrX 39084326 39084536 + 9.19 0.000 Intergenic L1MB3|LINE|L1 242931 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr11-5911 chr11 13905935 13906145 + 9.19 0.000 Intergenic Intergenic 18823 NR_135052 101928132 Hs.568970 NR_135052 ENSG00000254438 LINC02683 - long intergenic non-protein coding RNA 2683 ncRNA chr13-2466 chr13 50467325 50467535 + 9.19 0.000 intron (NR_109974, intron 4 of 6) intron (NR_109974, intron 4 of 6) 60019 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr3-5419 chr3 168914636 168914846 + 9.19 0.000 intron (NR_109989, intron 4 of 4) intron (NR_109989, intron 4 of 4) 12796 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr11-3299 chr11 96053079 96053289 + 9.19 0.000 intron (NM_032427, intron 2 of 4) intron (NM_032427, intron 2 of 4) -128977 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr1-16710 chr1 246801376 246801586 + 9.19 0.000 Intergenic Intergenic 11864 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr2-12476 chr2 61258611 61258821 + 9.19 0.000 intron (NM_014709, intron 44 of 79) L2|LINE|L2 81298 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr1-4806 chr1 20482613 20482823 + 9.19 0.000 3' UTR (NM_018584, exon 2 of 2) 3' UTR (NM_018584, exon 2 of 2) 3492 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding chr2-6679 chr2 16815740 16815950 + 9.19 0.000 Intergenic L2|LINE|L2 -150011 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr1-10144 chr1 106948491 106948701 + 9.19 0.000 Intergenic L2b|LINE|L2 -108078 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr1-6908 chr1 147377591 147377801 + 9.19 0.000 Intergenic LTR73|LTR|ERV1 134554 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr3-3736 chr3 194481303 194481513 + 9.19 0.000 intron (NM_001367549, intron 2 of 33) intron (NM_001367549, intron 2 of 33) 5594 NM_001367549 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr6-4531 chr6 39411534 39411744 + 9.19 0.000 intron (NM_001289024, intron 2 of 9) intron (NM_001289024, intron 2 of 9) 19751 NM_001351566 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr15-3155 chr15 67618284 67618494 + 9.19 0.000 intron (NM_001206804, intron 8 of 21) L2a|LINE|L2 69295 NM_001206804 5607 Hs.114198 NM_002757 ENSG00000137764 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding chr7-6056 chr7 112520419 112520629 + 9.19 0.000 Intergenic Intergenic 39533 NM_182597 286006 Hs.396189 NM_182597 ENSG00000181016 LSMEM1 C7orf53 leucine rich single-pass membrane protein 1 protein-coding chr9-3845 chr9 130677047 130677257 + 9.19 0.000 intron (NM_021619, intron 3 of 4) AluSz6|SINE|Alu 12558 NM_021619 59335 Hs.495311 NM_021619 ENSG00000130711 PRDM12 HSAN8|PFM9 PR/SET domain 12 protein-coding chr7-1579 chr7 96905521 96905731 + 9.19 0.000 Intergenic AluJr|SINE|Alu -99927 NM_005222 1750 Hs.249196 NM_005222 ENSG00000006377 DLX6 - distal-less homeobox 6 protein-coding chr14-2053 chr14 65336418 65336628 + 9.19 0.000 Intergenic L2a|LINE|L2 -1340 NR_039857 100616176 NR_039857 ENSG00000266740 MIR4708 mir-4708 microRNA 4708 ncRNA chr5-5047 chr5 90885097 90885307 + 9.19 0.000 intron (NR_003149, intron 83 of 89) MamRTE1|LINE|RTE-BovB 326405 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr14-2934 chr14 44371973 44372183 + 9.19 0.000 Intergenic MER112|DNA|hAT-Charlie 135205 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr10-4186 chr10 100469937 100470147 + 9.19 0.000 intron (NM_003393, intron 1 of 5) intron (NM_003393, intron 1 of 5) 7033 NM_003393 7479 Hs.421281 NM_003393 ENSG00000075290 WNT8B - Wnt family member 8B protein-coding chr4-2575 chr4 96518579 96518789 + 9.19 0.000 intron (NR_147149, intron 2 of 3) MLT1C|LTR|ERVL-MaLR 207981 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr6-4988 chr6 107782380 107782590 + 9.19 0.000 intron (NM_198081, intron 1 of 7) intron (NM_198081, intron 1 of 7) 41828 NM_001286408 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr5-8870 chr5 154338798 154339008 + 9.19 0.000 intron (NM_198321, intron 4 of 11) intron (NM_198321, intron 4 of 11) -8203 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr6-8160 chr6 131539105 131539315 + 9.19 0.000 Intergenic L1PA7|LINE|L1 -34016 NM_001244438 383 Hs.440934 NM_000045 ENSG00000118520 ARG1 - arginase 1 protein-coding chr1-16177 chr1 206611688 206611898 + 9.19 0.000 intron (NM_006893, intron 1 of 14) intron (NM_006893, intron 1 of 14) 672 NM_006893 1939 Hs.497581 NM_006893 ENSG00000143486 EIF2D HCA56|LGTN eukaryotic translation initiation factor 2D protein-coding chr17-4164 chr17 83185159 83185369 + 9.19 0.000 Intergenic Intergenic -41633 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr13-1826 chr13 71608865 71609075 + 9.19 0.000 intron (NM_001366712, intron 3 of 11) intron (NM_001366712, intron 3 of 11) 258222 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr8-6993 chr8 108296737 108296947 + 9.19 0.000 Intergenic Intergenic -48125 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr14-2980 chr14 51319163 51319373 + 9.19 0.000 intron (NR_145423, intron 1 of 1) intron (NR_145423, intron 1 of 1) 9117 NR_145423 161342 NR_145423 ENSG00000258955 LINC00519 C14orf30|c14_5317 long intergenic non-protein coding RNA 519 ncRNA chr9-5067 chr9 33463278 33463488 + 9.19 0.000 exon (NM_022917, exon 24 of 26) exon (NM_022917, exon 24 of 26) 4552 NR_106910 102465512 NR_106910 ENSG00000275651 MIR6851 hsa-mir-6851 microRNA 6851 ncRNA chr17-2337 chr17 58402948 58403158 + 9.19 0.000 promoter-TSS (NM_001305545) promoter-TSS (NM_001305545) -332 NM_001305545 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr2-9238 chr2 218904619 218904829 + 9.19 0.000 intron (NR_110238, intron 4 of 4) intron (NR_110238, intron 4 of 4) 23872 NM_025216 80326 Hs.121540 NM_025216 ENSG00000135925 WNT10A OODD|SSPS|STHAG4 Wnt family member 10A protein-coding chr3-6063 chr3 51097701 51097911 + 9.19 0.000 intron (NM_004947, intron 9 of 52) L1P3|LINE|L1 -287485 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr5-6115 chr5 27697115 27697325 + 9.19 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 224928 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr10-6318 chr10 113408765 113408975 + 9.19 0.000 Intergenic Intergenic -141961 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr3-4482 chr3 52345706 52345916 + 9.19 0.000 intron (NM_015512, intron 10 of 77) intron (NM_015512, intron 10 of 77) 29492 NM_015512 25981 Hs.655469 NM_015512 ENSG00000114841 DNAH1 CILD37|DNAHC1|HDHC7|HL-11|HL11|HSRF-1|SPGF18|XLHSRF-1 dynein axonemal heavy chain 1 protein-coding chr8-3518 chr8 117380247 117380457 + 9.19 0.000 Intergenic Intergenic -140361 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr17-6178 chr17 82743439 82743649 + 9.19 0.000 intron (NM_022158, intron 4 of 5) intron (NM_022158, intron 4 of 5) 7929 NM_022158 64122 Hs.151135 NM_022158 ENSG00000167363 FN3K - fructosamine 3 kinase protein-coding chr12-7097 chr12 44597130 44597340 + 9.19 0.000 intron (NM_006159, intron 16 of 20) L3|LINE|CR1 278426 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr3-4723 chr3 62719084 62719294 + 9.19 0.000 intron (NM_003716, intron 3 of 29) L2b|LINE|L2 156227 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr3-7180 chr3 188320780 188320990 + 9.19 0.000 intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 95480 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr16-1494 chr16 3980906 3981116 + 9.19 0.000 intron (NM_001116, intron 7 of 10) intron (NM_001116, intron 7 of 10) -30567 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr4-7293 chr4 53090198 53090408 + 9.19 0.000 intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 227986 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr5-6144 chr5 37004245 37004455 + 9.19 0.000 intron (NM_015384, intron 16 of 45) intron (NM_015384, intron 16 of 45) 127581 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr1-7027 chr1 172321321 172321531 + 9.19 0.000 intron (NR_146559, intron 17 of 20) intron (NR_146559, intron 17 of 20) -99259 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr2-8621 chr2 143943298 143943508 + 9.19 0.000 intron (NR_110237, intron 2 of 2) intron (NR_110237, intron 2 of 2) 6336 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr7-4995 chr7 158775132 158775342 + 9.19 0.000 intron (NM_020728, intron 6 of 21) Tigger1|DNA|TcMar-Tigger 54272 NM_001367773 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chrX-782 chrX 44876075 44876285 + 9.19 0.000 intron (NR_111960, intron 2 of 27) intron (NR_111960, intron 2 of 27) 3005 NM_001291417 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding chr8-4126 chr8 73766341 73766551 + 9.19 0.000 Intergenic Intergenic -18738 NM_001164384 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr2-7125 chr2 188853393 188853603 + 9.19 0.000 Intergenic Intergenic -63375 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chrX-547 chrX 10620394 10620604 + 9.19 0.000 promoter-TSS (NM_033289) promoter-TSS (NM_033289) 86 NM_000381 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr3-6983 chr3 168489370 168489580 + 9.19 0.000 intron (NR_021485, intron 3 of 15) intron (NR_021485, intron 3 of 15) -62379 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr7-3294 chr7 38496294 38496504 + 9.19 0.000 intron (NM_001635, intron 3 of 20) intron (NM_001635, intron 3 of 20) 134974 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr8-7112 chr8 119188169 119188379 + 9.19 0.000 Intergenic LTR75|LTR|ERVL -20089 NM_052886 114569 Hs.201083 NM_052886 ENSG00000147676 MAL2 - mal, T cell differentiation protein 2 (gene/pseudogene) protein-coding chr1-10759 chr1 200583739 200583949 + 9.19 0.000 intron (NM_014875, intron 19 of 29) AluSq|SINE|Alu 34994 NM_001305792 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding chr5-9165 chr5 177359320 177359530 + 9.19 0.000 intron (NM_006480, intron 1 of 14) intron (NM_006480, intron 1 of 14) 1501 NM_006480 10636 Hs.9347 NM_006480 ENSG00000169220 RGS14 - regulator of G protein signaling 14 protein-coding chr2-5287 chr2 65553278 65553488 + 9.19 0.000 Intergenic Intergenic -120784 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr20-1817 chr20 63192984 63193194 + 9.19 0.000 Intergenic Intergenic 14589 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA chr9-2865 chr9 129383685 129383895 + 9.19 0.000 Intergenic CpG 46867 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr6-1743 chr6 44271064 44271274 + 9.19 0.000 intron (NM_001137560, intron 1 of 2) intron (NM_001137560, intron 1 of 2) 719 NM_001137560 441151 Hs.632851 NM_001039704 ENSG00000178233 TMEM151B C6orf137|TMEM193|bA444E17.5 transmembrane protein 151B protein-coding chr4-4899 chr4 121595144 121595354 + 9.19 0.000 Intergenic Intergenic 101731 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr11-4870 chr11 36538202 36538412 + 9.19 0.000 Intergenic Intergenic -28035 NM_004620 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr2-7111 chr2 179377176 179377386 + 9.19 0.000 Intergenic L1PA16|LINE|L1 -112449 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr1-10880 chr1 205991316 205991526 + 9.19 0.000 intron (NM_001164522, intron 4 of 5) L2c|LINE|L2 3018 NM_177403 338382 Hs.534612 NM_177403 ENSG00000276600 RAB7B RAB7 RAB7B, member RAS oncogene family protein-coding chr5-3954 chr5 5309670 5309880 + 9.19 0.000 intron (NM_139056, intron 21 of 22) intron (NM_139056, intron 21 of 22) -112902 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr15-1408 chr15 45094143 45094353 + 9.19 0.000 exon (NM_001363711, exon 34 of 34) exon (NM_001363711, exon 34 of 34) 19913 NM_014080 50506 Hs.71377 NM_014080 ENSG00000140279 DUOX2 LNOX2|NOXEF2|P138-TOX|TDH6|THOX2 dual oxidase 2 protein-coding chr17-4375 chr17 19341992 19342202 + 9.19 0.000 TTS (NM_001321214) TTS (NM_001321214) 2477 NR_031591 100302256 NR_031591 ENSG00000221540 MIR1180 MIRN1180|hsa-mir-1180|mir-1180 microRNA 1180 ncRNA chr5-3897 chr5 151677443 151677653 + 9.19 0.000 intron (NR_109873, intron 1 of 4) MIR3|SINE|MIR 603 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr22-2827 chr22 43439643 43439853 + 9.19 0.000 intron (NM_001362786, intron 3 of 6) intron (NM_001362786, intron 3 of 6) 23196 NM_001362786 758 Hs.159538 NM_001044370 ENSG00000186732 MPPED1 239AB|C22orf1|FAM1A metallophosphoesterase domain containing 1 protein-coding chr1-9973 chr1 81223570 81223780 + 9.19 0.000 Intergenic AluJb|SINE|Alu -82517 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr8-4158 chr8 77399252 77399462 + 9.19 0.000 Intergenic Intergenic -51340 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr22-1225 chr22 41414304 41414514 + 9.19 0.000 Intergenic MIR1_Amn|SINE|MIR 32392 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding chr5-7483 chr5 34436467 34436677 + 9.19 0.000 Intergenic AluJb|SINE|Alu -191848 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr4-2514 chr4 37601489 37601699 + 9.19 0.000 intron (NM_001085399, intron 6 of 6) intron (NM_001085399, intron 6 of 6) 17361 NM_018302 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr1-5674 chr1 41901615 41901825 + 9.19 0.000 intron (NR_038261, intron 2 of 3) intron (NR_038261, intron 2 of 3) 17202 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr11-6252 chr11 57127846 57128056 + 9.19 0.000 Intergenic Intergenic -54002 NM_001005210 219527 Hs.199853 NM_001005210 ENSG00000183908 LRRC55 - leucine rich repeat containing 55 protein-coding chr5-2176 chr5 129768010 129768220 + 9.19 0.000 Intergenic Intergenic 20021 NM_001257308 100127206 Hs.582534 NM_001257308 ENSG00000186367 MINAR2 KIAA1024L membrane integral NOTCH2 associated receptor 2 protein-coding chr4-3269 chr4 109441127 109441337 + 9.19 0.000 intron (NM_001042734, intron 1 of 22) MIRb|SINE|MIR -7415 NR_039978 100533182 Hs.518927 NR_039978 ENSG00000247950 SEC24B-AS1 1/2-SBSRNA4 SEC24B antisense RNA 1 ncRNA chr5-4004 chr5 24735370 24735580 + 9.19 0.000 Intergenic LTR3A|LTR|ERVK -90497 NM_001317224 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr3-4712 chr3 57416035 57416245 + 9.19 0.000 intron (NM_001366028, intron 37 of 73) AluJr|SINE|Alu -123455 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chr18-2881 chr18 10242323 10242533 + 9.19 0.000 Intergenic LTR104_Mam|LTR|Gypsy 171942 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr1-13247 chr1 219906301 219906511 + 9.19 0.000 Intergenic MIR|SINE|MIR 22245 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr5-5046 chr5 90863680 90863890 + 9.19 0.000 exon (NM_032119, exon 83 of 90) exon (NM_032119, exon 83 of 90) 304988 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr11-1777 chr11 65084112 65084322 + 9.19 0.000 promoter-TSS (NM_080668) promoter-TSS (NM_080668) -5 NM_006782 7542 Hs.98170 NM_006782 ENSG00000162300 ZFPL1 D11S750|MCG4 zinc finger protein like 1 protein-coding chr7-2327 chr7 126752178 126752388 + 9.19 0.000 intron (NM_001371088, intron 7 of 7) FAM|SINE|Alu 305901 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr2-14334 chr2 218150259 218150469 + 9.19 0.000 Intergenic Intergenic 16598 NM_000634 3577 Hs.194778 NM_000634 ENSG00000163464 CXCR1 C-C|C-C-CKR-1|CD128|CD181|CDw128a|CKR-1|CMKAR1|IL8R1|IL8RA|IL8RBA C-X-C motif chemokine receptor 1 protein-coding chr4-6211 chr4 55175718 55175928 + 9.19 0.000 Intergenic Intergenic -50228 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr3-4886 chr3 177567862 177568072 + 9.19 0.000 intron (NR_047568, intron 2 of 3) intron (NR_047568, intron 2 of 3) 126046 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr1-7037 chr1 176111869 176112079 + 9.19 0.000 intron (NM_022457, intron 9 of 19) intron (NM_022457, intron 9 of 19) 95270 NM_001286644 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr20-1174 chr20 444975 445185 + 9.19 0.000 exon (NM_144628, exon 3 of 8) exon (NM_144628, exon 3 of 8) 17453 NR_111901 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding chr4-1484 chr4 17578360 17578570 + 9.19 0.000 intron (NM_015907, intron 1 of 12) intron (NM_015907, intron 1 of 12) 1161 NM_015907 51056 Hs.570791 NM_015907 ENSG00000002549 LAP3 HEL-S-106|LAP|LAPEP|PEPS leucine aminopeptidase 3 protein-coding chr12-3274 chr12 68783989 68784199 + 9.19 0.000 Intergenic Intergenic 21400 NR_073494 100130075 Hs.744781 NR_073494 LOC100130075 - SUZ RNA binding domain containing 1 pseudogene pseudo chr10-4029 chr10 13556990 13557200 + 9.19 0.000 Intergenic HAL1|LINE|L1 -28081 NM_001369863 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr10-5774 chr10 104157097 104157307 + 9.19 0.000 intron (NM_025145, intron 27 of 37) intron (NM_025145, intron 27 of 37) 35031 NM_001002759 119392 Hs.93667 NM_145247 ENSG00000156384 SFR1 C10orf78|MEI5|MEIR5|bA373N18.1 SWI5 dependent homologous recombination repair protein 1 protein-coding chr7-6043 chr7 110921696 110921906 + 9.19 0.000 intron (NM_032549, intron 4 of 5) intron (NM_032549, intron 4 of 5) -169205 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr4-2480 chr4 7595792 7596002 + 9.19 0.000 intron (NM_020777, intron 3 of 26) L2b|LINE|L2 135869 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr13-2831 chr13 107684185 107684395 + 9.19 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 151168 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA chr10-3002 chr10 97614450 97614660 + 9.19 0.000 TTS (NM_001098831) TTS (NM_001098831) 18945 NM_178832 118812 Hs.217409 NM_178832 ENSG00000171160 MORN4 C10orf83|UTA|bA548K23.4|rtp MORN repeat containing 4 protein-coding chr11-5819 chr11 7486628 7486838 + 9.19 0.000 intron (NM_198474, intron 1 of 2) intron (NM_198474, intron 1 of 2) 967 NM_001370501 283298 Hs.503500 NM_198474 ENSG00000183801 OLFML1 MVAL564|UNQ564 olfactomedin like 1 protein-coding chr11-5904 chr11 13039045 13039255 + 9.19 0.000 Intergenic A-rich|Low_complexity|Low_complexity 29834 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding ML143364.1-5 ML143364.1 36138 36348 + 9.19 0.000 NA NA NA NA chr18-1603 chr18 43486588 43486798 + 9.19 0.000 Intergenic LTR18B|LTR|ERVL -209203 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr6-6633 chr6 153038624 153038834 + 9.19 0.000 intron (NM_012419, intron 2 of 4) intron (NM_012419, intron 2 of 4) -35914 NM_001301872 54516 Hs.225836 NM_019041 ENSG00000112031 MTRF1L HMRF1L|MRF1L|mtRF1a mitochondrial translational release factor 1 like protein-coding chr6-2921 chr6 20584060 20584270 + 9.19 0.000 intron (NM_017774, intron 4 of 15) intron (NM_017774, intron 4 of 15) 49708 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr22-2485 chr22 21755312 21755522 + 9.19 0.000 Intergenic Intergenic -19623 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr9-2890 chr9 132988195 132988405 + 9.19 0.000 exon (NM_004188, exon 8 of 11) exon (NM_004188, exon 8 of 11) 9606 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr3-9636 chr3 59784122 59784332 + 9.19 0.000 intron (NM_001354590, intron 7 of 8) L2b|LINE|L2 -125730 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr7-3579 chr7 23184992 23185202 + 9.19 0.000 exon (NM_007342, exon 2 of 7) exon (NM_007342, exon 2 of 7) 3049 NM_001370445 11097 Hs.408241 NM_007342 ENSG00000136243 NUP42 CG1|NLP-1|NLP_1|NUPL2|hCG1 nucleoporin 42 protein-coding chr6-5772 chr6 168523433 168523643 + 9.19 0.000 intron (NM_001166412, intron 2 of 12) AluSc8|SINE|Alu 82354 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr6-3921 chr6 75196484 75196694 + 9.19 0.000 intron (NM_004370, intron 2 of 65) intron (NM_004370, intron 2 of 65) 9464 NM_080645 1303 Hs.101302 NM_004370 ENSG00000111799 COL12A1 BA209D8.1|BTHLM2|COL12A1L|DJ234P15.1|EDSMYP|UCMD2 collagen type XII alpha 1 chain protein-coding chr4-4556 chr4 73414880 73415090 + 9.19 0.000 intron (NM_000477, intron 8 of 14) intron (NM_000477, intron 8 of 14) 10698 NM_000477 213 Hs.418167 NM_000477 ENSG00000163631 ALB HSA|PRO0883|PRO0903|PRO1341 albumin protein-coding chr6-3428 chr6 120664364 120664574 + 9.19 0.000 Intergenic L1PA12|LINE|L1 649290 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr2-9491 chr2 236248896 236249106 + 9.19 0.000 intron (NM_212556, intron 1 of 5) intron (NM_212556, intron 1 of 5) 15344 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr1-4283 chr1 15684227 15684437 + 9.19 0.000 promoter-TSS (NM_015164) promoter-TSS (NM_015164) 12 NM_015164 23207 Hs.646775 NM_015164 ENSG00000116786 PLEKHM2 SKIP pleckstrin homology and RUN domain containing M2 protein-coding chr13-2030 chr13 45819881 45820091 + 9.19 0.000 intron (NM_198849, intron 1 of 1) MLT1A1|LTR|ERVL-MaLR 31767 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr17-8397 chr17 75494868 75495078 + 9.19 0.000 exon (NM_001351203, exon 19 of 31) exon (NM_001351203, exon 19 of 31) -3575 NR_106843 102466911 NR_106843 ENSG00000284595 MIR6785 hsa-mir-6785 microRNA 6785 ncRNA chr5-5228 chr5 116395811 116396021 + 9.19 0.000 Intergenic Intergenic -21346 NR_104675 101927190 Hs.639849 NR_104675 LOC101927190 - uncharacterized LOC101927190 ncRNA chr17-6052 chr17 79375472 79375682 + 9.19 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 140571 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr6-4779 chr6 74715772 74715982 + 9.19 0.000 Intergenic L1MB2|LINE|L1 412905 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr1-11886 chr1 44531980 44532190 + 9.19 0.000 intron (NM_001319957, intron 1 of 13) L3|LINE|CR1 -13408 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr10-3453 chr10 50653283 50653493 + 9.19 0.000 Intergenic Intergenic 28437 NR_126411 104355295 Hs.450493 NR_126411 SGMS1-AS1 - SGMS1 antisense RNA 1 ncRNA chr13-4292 chr13 98822121 98822331 + 9.19 0.000 intron (NM_001366682, intron 45 of 53) intron (NM_001366682, intron 45 of 53) -9858 NR_046663 100874096 Hs.578066 NR_046663 ENSG00000229918 DOCK9-AS1 - DOCK9 antisense RNA 1 ncRNA chr22-1988 chr22 22836582 22836792 + 9.19 0.000 Intergenic AluJo|SINE|Alu 13911 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr2-7631 chr2 27211413 27211623 + 9.19 0.000 promoter-TSS (NM_001170795) promoter-TSS (NM_001170795) -513 NM_080592 51374 Hs.9527 NM_016085 ENSG00000138085 ATRAID APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18 all-trans retinoic acid induced differentiation factor protein-coding chr5-2645 chr5 859871 860081 + 9.19 0.000 Intergenic Intergenic -8990 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr19-3812 chr19 7368140 7368350 + 9.19 0.000 intron (NM_001367823, intron 2 of 28) intron (NM_001367823, intron 2 of 28) 19308 NM_001367823 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr8-3643 chr8 4280081 4280291 + 9.19 0.000 intron (NM_033225, intron 3 of 69) intron (NM_033225, intron 3 of 69) 714728 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr10-3812 chr10 132721820 132722030 + 9.19 0.000 intron (NM_005539, intron 8 of 15) intron (NM_005539, intron 8 of 15) 40650 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr12-2262 chr12 95536904 95537114 + 9.19 0.000 intron (NR_125360, intron 1 of 5) intron (NR_125360, intron 1 of 5) 11229 NM_001278393 84101 Hs.646421 NM_032147 ENSG00000136014 USP44 - ubiquitin specific peptidase 44 protein-coding chr22-849 chr22 50119887 50120097 + 9.19 0.000 intron (NM_018995, intron 9 of 26) intron (NM_018995, intron 9 of 26) -27063 NM_001164106 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chr3-5178 chr3 66629391 66629601 + 9.19 0.000 Intergenic Intergenic 108840 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr19-3799 chr19 4571412 4571622 + 9.19 0.000 Intergenic Intergenic -11833 NM_032108 10501 Hs.465642 NM_020241 ENSG00000167680 SEMA6B SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ semaphorin 6B protein-coding chr16-5638 chr16 65745735 65745945 + 9.19 0.000 Intergenic Intergenic -169540 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr1-10478 chr1 162916585 162916795 + 9.19 0.000 Intergenic L1PREC2|LINE|L1 -47875 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr4-7080 chr4 31937155 31937365 + 9.19 0.000 Intergenic Intergenic -60119 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA chr11-4801 chr11 3689134 3689344 + 9.19 0.000 intron (NR_157590, intron 27 of 31) AluJb|SINE|Alu -17855 NM_020402 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr10-3665 chr10 101444277 101444487 + 9.19 0.000 intron (NM_001256856, intron 2 of 13) intron (NM_001256856, intron 2 of 13) 90217 NM_033637 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr9-2130 chr9 107750843 107751053 + 9.19 0.000 Intergenic Intergenic -261179 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr19-3225 chr19 294471 294681 + 9.19 0.000 Intergenic Intergenic -3173 NM_177526 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr4-2334 chr4 165360441 165360651 + 9.19 0.000 Intergenic Intergenic -18462 NM_001873 1363 Hs.75360 NM_001873 ENSG00000109472 CPE CPH carboxypeptidase E protein-coding chr9-5786 chr9 128181609 128181819 + 9.19 0.000 intron (NM_001131016, intron 5 of 16) LTR13|LTR|ERVK 9858 NM_001257976 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr13-2688 chr13 89331333 89331543 + 9.19 0.000 Intergenic Intergenic -94548 NR_131229 105616982 Hs.564527 NR_131229 ENSG00000232225 LINC01047 - long intergenic non-protein coding RNA 1047 ncRNA chr8-3480 chr8 100610617 100610827 + 9.19 0.000 intron (NM_152628, intron 7 of 13) intron (NM_152628, intron 7 of 13) 7683 NM_001363720 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr1-6417 chr1 14871909 14872119 + 9.19 0.000 intron (NM_201628, intron 1 of 14) L2|LINE|L2 -52115 NM_001018000 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr1-5827 chr1 226115717 226115927 + 9.19 0.000 Intergenic SVA_D|Retroposon|SVA -32181 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr7-5703 chr7 69944371 69944581 + 9.19 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 346001 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr9-4889 chr9 6098726 6098936 + 9.19 0.000 Intergenic Intergenic -83207 NM_012416 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr11-4386 chr11 76798048 76798258 + 9.19 0.000 TTS (NM_015516) TTS (NM_015516) 6401 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr10-4355 chr10 32734061 32734271 + 9.19 0.000 intron (NM_001321115, intron 29 of 43) L1PA14|LINE|L1 167306 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr3-6740 chr3 139445414 139445624 + 9.19 0.000 TTS (NR_121608) TTS (NR_121608) 30997 NM_004164 5948 Hs.655516 NM_004164 ENSG00000114113 RBP2 CRABP-II|CRBP2|CRBPII|RBPC2 retinol binding protein 2 protein-coding chr13-3819 chr13 46955824 46956034 + 9.19 0.000 Intergenic HAL1M8|LINE|L1 -58853 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chrX-1658 chrX 147273325 147273535 + 9.19 0.000 Intergenic L1M4b|LINE|L1 -1022 NR_030237 574515 NR_030237 ENSG00000207641 MIR510 MIRN510|hsa-mir-510|mir-510 microRNA 510 ncRNA chr16-1425 chr16 24729547 24729757 + 9.19 0.000 promoter-TSS (NM_001330520) promoter-TSS (NM_001330520) 1 NM_001330520 27327 Hs.655057 NM_014494 ENSG00000090905 TNRC6A CAGH26|FAME6|GW1|GW182|TNRC6 trinucleotide repeat containing adaptor 6A protein-coding chr2-11013 chr2 104493014 104493224 + 9.19 0.000 intron (NR_110113, intron 4 of 5) AluJb|SINE|Alu 17390 NR_110113 101927360 Hs.650324 NR_110113 ENSG00000234781 LINC01103 - long intergenic non-protein coding RNA 1103 ncRNA chr8-4485 chr8 118346536 118346746 + 9.19 0.000 intron (NM_001363274, intron 4 of 4) MER68|LTR|ERVL -234822 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr12-1931 chr12 103326209 103326419 + 9.19 0.000 intron (NM_001099336, intron 4 of 5) L2a|LINE|L2 169654 NM_001278419 374470 Hs.534649 NM_198521 ENSG00000179088 C12orf42 - chromosome 12 open reading frame 42 protein-coding chrX-4586 chrX 72007929 72008139 + 9.19 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -36375 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr16-2562 chr16 68749427 68749637 + 9.19 0.000 intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) 12240 NM_004360 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr1-5685 chr1 46558163 46558373 + 9.19 0.000 non-coding (NR_038403, exon 4 of 8) non-coding (NR_038403, exon 4 of 8) -6611 NM_001322255 148930 Hs.350764 NM_182516 ENSG00000162456 KNCN Kino|L5 kinocilin protein-coding chr3-7346 chr3 49662404 49662614 + 9.19 0.000 exon (NM_003458, exon 6 of 12) exon (NM_003458, exon 6 of 12) -11842 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr14-5110 chr14 88926853 88927063 + 9.19 0.000 Intergenic L1ME3A|LINE|L1 102307 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr8-3649 chr8 5848759 5848969 + 9.19 0.000 Intergenic Intergenic 557684 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr12-3610 chr12 57602754 57602964 + 9.19 0.000 3' UTR (NM_001146258, exon 11 of 11) 3' UTR (NM_001146258, exon 11 of 11) -1965 NM_178502 196403 Hs.32374 NM_178502 ENSG00000178498 DTX3 RNF154|deltex3 deltex E3 ubiquitin ligase 3 protein-coding chr4-1532 chr4 140213934 140214144 + 9.19 0.000 Intergenic LTR16B|LTR|ERVL -43269 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chrX-4717 chrX 88318736 88318946 + 9.19 0.000 Intergenic L1PA5|LINE|L1 -428384 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr7-9534 chr7 140012749 140012959 + 9.19 0.000 intron (NM_001366537, intron 9 of 11) intron (NM_001366537, intron 9 of 11) 50867 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr7-5522 chr7 44782483 44782693 + 9.19 0.000 Intergenic Intergenic -14093 NM_021130 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr13-1222 chr13 75694887 75695097 + 9.19 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 58662 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr6-1748 chr6 47242573 47242783 + 9.19 0.000 intron (NM_014452, intron 4 of 5) intron (NM_014452, intron 4 of 5) 67227 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr9-1264 chr9 130834995 130835205 + 9.19 0.000 promoter-TSS (NM_005157) promoter-TSS (NM_005157) -154 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr10-1670 chr10 123891235 123891445 + 9.19 0.000 intron (NM_198148, intron 1 of 13) CpG 467 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr13-1298 chr13 45281146 45281356 + 9.19 0.000 intron (NM_004128, intron 7 of 7) intron (NM_004128, intron 7 of 7) 55196 NR_145985 109616966 NR_145726 ENSG00000253051 SNORA31B - small nucleolar RNA, H/ACA box 31B snoRNA chr22-2496 chr22 22210528 22210738 + 9.19 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -34153 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr8-4733 chr8 142192369 142192579 + 9.19 0.000 Intergenic Intergenic -5882 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr1-3171 chr1 89519865 89520075 + 9.19 0.000 Intergenic Intergenic -4859 NM_001134476 23507 Hs.482017 NM_015350 ENSG00000197147 LRRC8B TA-LRRP|TALRRP leucine rich repeat containing 8 VRAC subunit B protein-coding chr16-3726 chr16 6516369 6516579 + 9.19 0.000 intron (NM_018723, intron 2 of 15) intron (NM_018723, intron 2 of 15) -257335 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr8-2079 chr8 126827920 126828130 + 9.19 0.000 Intergenic Intergenic -185129 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr6-8056 chr6 121504174 121504384 + 9.19 0.000 Intergenic Intergenic 68633 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr10-7798 chr10 37160527 37160737 + 9.19 0.000 intron (NM_052997, intron 15 of 35) intron (NM_052997, intron 15 of 35) 34775 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr11-6330 chr11 62373908 62374118 + 9.19 0.000 intron (NM_025080, intron 4 of 6) intron (NM_025080, intron 4 of 6) 36565 NM_001083926 80150 Hs.535326 NM_025080 ENSG00000162174 ASRGL1 ALP|ALP1|CRASH asparaginase like 1 protein-coding chr1-8451 chr1 107935320 107935530 + 9.19 0.000 intron (NM_006113, intron 1 of 26) intron (NM_006113, intron 1 of 26) -29018 NR_046653 100873946 Hs.568676 NR_046653 ENSG00000230489 VAV3-AS1 - VAV3 antisense RNA 1 ncRNA chr19-3028 chr19 53905116 53905326 + 9.19 0.000 intron (NM_002739, intron 16 of 17) intron (NM_002739, intron 16 of 17) -7516 NM_031896 59284 Hs.631597 NM_031896 ENSG00000105605 CACNG7 - calcium voltage-gated channel auxiliary subunit gamma 7 protein-coding chrX-5224 chrX 136028625 136028835 + 9.19 0.000 intron (NM_006359, intron 12 of 15) intron (NM_006359, intron 12 of 15) 43295 NM_001330652 10479 Hs.62185 NM_006359 ENSG00000198689 SLC9A6 MRSA|NHE6 solute carrier family 9 member A6 protein-coding chr17-5646 chr17 49944710 49944920 + 9.19 0.000 Intergenic Intergenic -24375 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr2-8778 chr2 165555629 165555839 + 9.19 0.000 intron (NM_001172173, intron 3 of 6) L2c|LINE|L2 -16602 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr17-3687 chr17 14395917 14396127 + 9.19 0.000 Intergenic Intergenic 92282 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr12-2555 chr12 108709773 108709983 + 9.19 0.000 intron (NM_014325, intron 1 of 10) intron (NM_014325, intron 1 of 10) -6880 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr9-5900 chr9 132498446 132498656 + 9.19 0.000 intron (NM_207417, intron 2 of 6) intron (NM_207417, intron 2 of 6) -84055 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr9-5211 chr9 74723050 74723260 + 9.19 0.000 3' UTR (NM_001177310, exon 39 of 39) 3' UTR (NM_001177310, exon 39 of 39) 107621 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr7-5690 chr7 67192283 67192493 + 9.19 0.000 intron (NR_134540, intron 13 of 14) intron (NR_134540, intron 13 of 14) -77991 NR_039793 100616310 NR_039793 ENSG00000266525 MIR4650-1 - microRNA 4650-1 ncRNA chr17-4032 chr17 76772788 76772998 + 9.19 0.000 intron (NM_001353019, intron 11 of 13) L1MEc|LINE|L1 -26151 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr16-6605 chr16 67425168 67425378 + 9.19 0.000 Intergenic Intergenic -5848 NM_000196 3291 Hs.1376 NM_000196 ENSG00000176387 HSD11B2 AME|AME1|HSD11K|HSD2|SDR9C3 hydroxysteroid 11-beta dehydrogenase 2 protein-coding chr11-6626 chr11 74255738 74255948 + 9.19 0.000 Intergenic Intergenic -55519 NR_120556 101928580 Hs.569025 NR_120556 ENSG00000246211 P4HA3-AS1 - P4HA3 antisense RNA 1 ncRNA chr1-13970 chr1 24944111 24944321 + 9.19 0.000 intron (NM_001320672, intron 2 of 6) L2a|LINE|L2 -13940 NM_004350 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr2-10141 chr2 73546941 73547151 + 9.19 0.000 intron (NM_015120, intron 12 of 22) MER47A|DNA|TcMar-Tigger 89943 NR_046762 100874291 Hs.668279 NR_046762 ENSG00000230002 ALMS1-IT1 - ALMS1 intronic transcript 1 ncRNA chr2-7754 chr2 38772057 38772267 + 9.19 0.000 Intergenic LTR26|LTR|ERV1 -6048 NM_024775 79833 Hs.143818 NM_024775 ENSG00000152147 GEMIN6 - gem nuclear organelle associated protein 6 protein-coding chr5-5115 chr5 101389019 101389229 + 9.19 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -485842 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr15-2738 chr15 99547078 99547288 + 9.19 0.000 Intergenic Intergenic -18234 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr1-11882 chr1 44040963 44041173 + 9.19 0.000 Intergenic Charlie1|DNA|hAT-Charlie -9606 NM_001024845 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr2-10150 chr2 77169187 77169397 + 9.19 0.000 intron (NR_146416, intron 1 of 1) L1M2|LINE|L1 183327 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr17-4181 chr17 9535955 9536165 + 9.19 0.000 intron (NR_033656, intron 2 of 5) L1ME4b|LINE|L1 39760 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr9-4858 chr9 2126606 2126816 + 9.19 0.000 intron (NM_001289397, intron 27 of 32) intron (NM_001289397, intron 27 of 32) -30951 NM_001289398 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr2-12079 chr2 32838897 32839107 + 9.19 0.000 intron (NR_027099, intron 3 of 10) intron (NR_027099, intron 3 of 10) 13569 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr9-2965 chr9 137511375 137511585 + 9.19 0.000 intron (NM_001098537, intron 12 of 34) LTR13|LTR|ERVK 38922 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr11-10006 chr11 79833742 79833952 + 9.19 0.000 Intergenic L2c|LINE|L2 -392817 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr11-9698 chr11 67666720 67666930 + 9.19 0.000 intron (NM_001031615, intron 3 of 9) intron (NM_001031615, intron 3 of 9) 8015 NM_001354345 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr11-4670 chr11 61130904 61131114 + 9.19 0.000 3' UTR (NM_017966, exon 5 of 5) 3' UTR (NM_017966, exon 5 of 5) 28520 NM_014207 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr18-2929 chr18 13365145 13365355 + 9.19 0.000 intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 62284 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr21-757 chr21 42832905 42833115 + 9.19 0.000 Intergenic Intergenic 46265 NM_001260477 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr3-7306 chr3 17111038 17111248 + 9.19 0.000 Intergenic Intergenic 177947 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr1-12284 chr1 231474734 231474944 + 9.19 0.000 TTS (NR_033826) TTS (NR_033826) 1686 NR_033826 645339 Hs.382049 NR_033826 SNRPD2P2 - small nuclear ribonucleoprotein D2 pseudogene 2 pseudo chr17-2460 chr17 43760347 43760557 + 9.19 0.000 Intergenic Intergenic -1661 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr13-2543 chr13 63636336 63636546 + 9.19 0.000 Intergenic Intergenic -100994 NR_002171 283491 Hs.363054 NR_002171 OR7E156P - olfactory receptor family 7 subfamily E member 156 pseudogene pseudo chr17-8361 chr17 74257358 74257568 + 9.19 0.000 intron (NM_001330453, intron 13 of 13) intron (NM_001330453, intron 13 of 13) 9097 NM_052869 94015 Hs.27935 NM_032646 ENSG00000141540 TTYH2 C17orf29 tweety family member 2 protein-coding chr3-4102 chr3 107045768 107045978 + 9.19 0.000 Intergenic Intergenic 194765 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr2-6755 chr2 40369534 40369744 + 9.19 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 60665 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr14-2931 chr14 43535179 43535389 + 9.19 0.000 Intergenic HERV30-int|LTR|ERV1 971999 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr5-1753 chr5 180352246 180352456 + 9.19 0.000 intron (NM_005110, intron 1 of 18) CpG 985 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr7-9516 chr7 139023209 139023419 + 9.19 0.000 Intergenic MER102c|DNA|hAT-Charlie 12728 NM_080660 92092 Hs.512833 NM_080660 ENSG00000146858 ZC3HAV1L C7orf39 zinc finger CCCH-type containing, antiviral 1 like protein-coding chr6-2945 chr6 34611249 34611459 + 9.19 0.000 intron (NM_022758, intron 2 of 3) intron (NM_022758, intron 2 of 3) -55021 NM_001252294 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr8-4077 chr8 67007704 67007914 + 9.19 0.000 intron (NM_001364910, intron 5 of 7) MER44B|DNA|TcMar-Tigger 20742 NM_001348563 286187 Hs.583933 NM_001013626 ENSG00000178125 PPP1R42 LRRC67|TLLR|TLRR|dtr protein phosphatase 1 regulatory subunit 42 protein-coding chr2-1252 chr2 9951419 9951629 + 9.19 0.000 promoter-TSS (NM_198182) promoter-TSS (NM_198182) -169 NM_198182 29841 Hs.418493 NM_198182 ENSG00000134317 GRHL1 LBP32|MGR|NH32|TFCP2L2 grainyhead like transcription factor 1 protein-coding chr2-8518 chr2 129759545 129759755 + 9.19 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 117841 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr8-739 chr8 20303946 20304156 + 9.19 0.000 promoter-TSS (NM_021020) promoter-TSS (NM_021020) -88 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr8-4168 chr8 78924754 78924964 + 9.19 0.000 Intergenic Intergenic 87330 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA chr8-5692 chr8 124450245 124450455 + 9.19 0.000 promoter-TSS (NM_017956) promoter-TSS (NM_017956) -470 NM_017956 55039 Hs.9925 NM_017956 ENSG00000183665 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog protein-coding chr1-7821 chr1 59434454 59434664 + 9.19 0.000 intron (NM_001350794, intron 5 of 14) MLT1A0|LTR|ERVL-MaLR -81071 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr20-2838 chr20 60778319 60778529 + 9.19 0.000 Intergenic Intergenic 213862 NR_039653 100616440 NR_039653 ENSG00000265617 MIR548AG2 - microRNA 548ag-2 ncRNA chr10-7221 chr10 118254309 118254519 + 9.19 0.000 Intergenic MIRb|SINE|MIR 87910 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr7-8921 chr7 95132640 95132850 + 9.19 0.000 intron (NM_017650, intron 4 of 15) LTR27E|LTR|ERV1 191787 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr11-4733 chr11 73850417 73850627 + 9.19 0.000 intron (NR_134661, intron 4 of 5) intron (NR_134661, intron 4 of 5) -26177 NM_001267806 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr10-3998 chr10 132676599 132676809 + 9.19 0.000 intron (NM_005539, intron 4 of 15) L2|LINE|L2 -4571 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr6-4987 chr6 107720852 107721062 + 9.19 0.000 exon (NM_198081, exon 6 of 8) exon (NM_198081, exon 6 of 8) 11193 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr14-3675 chr14 98619826 98620036 + 9.19 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -91682 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr5-2923 chr5 137200052 137200262 + 9.19 0.000 intron (NM_004598, intron 3 of 10) L2a|LINE|L2 71960 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr14-1169 chr14 53767667 53767877 + 9.19 0.000 Intergenic Intergenic 180712 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr12-3305 chr12 78797478 78797688 + 9.19 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -66399 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr4-2366 chr4 4262218 4262428 + 9.19 0.000 Intergenic Intergenic -14081 NM_032927 85013 Hs.12845 NM_032927 ENSG00000132406 TMEM128 - transmembrane protein 128 protein-coding chr3-6423 chr3 101280083 101280293 + 9.19 0.000 intron (NM_016247, intron 4 of 18) intron (NM_016247, intron 4 of 18) 40387 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr4-5139 chr4 153025549 153025759 + 9.19 0.000 Intergenic MamRep38|DNA|hAT 82671 NM_033393 85462 Hs.132629 NM_033393 ENSG00000137460 FHDC1 - FH2 domain containing 1 protein-coding chr22-2209 chr22 18974465 18974675 + 9.19 0.000 intron (NR_045121, intron 1 of 2) intron (NR_045121, intron 1 of 2) 4072 NR_002733 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr4-6049 chr4 3839145 3839355 + 9.19 0.000 Intergenic Intergenic 72865 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chrX-1129 chrX 27177039 27177249 + 9.19 0.000 Intergenic L2c|LINE|L2 286197 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chrX-1601 chrX 95759600 95759810 + 9.19 0.000 Intergenic Intergenic 578197 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr11-5889 chr11 12402915 12403125 + 9.19 0.000 intron (NM_018222, intron 1 of 12) Tigger20a|DNA|TcMar-Tigger 25449 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr10-7115 chr10 97885712 97885922 + 9.19 0.000 intron (NM_001206528, intron 11 of 14) Charlie23a|DNA|hAT-Charlie -9920 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr4-4564 chr4 74312176 74312386 + 9.19 0.000 non-coding (NR_073117, exon 2 of 3) non-coding (NR_073117, exon 2 of 3) 3811 NM_001270989 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr11-4700 chr11 66166706 66166916 + 9.19 0.000 intron (NM_018026, intron 1 of 23) MIR|SINE|MIR -90483 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr1-11153 chr1 236548106 236548316 + 9.19 0.000 TTS (NM_018072) TTS (NM_018072) -23703 NR_034040 100287902 Hs.677376 NR_034040 ENSG00000223776 LGALS8-AS1 - LGALS8 antisense RNA 1 ncRNA chr5-2658 chr5 13921849 13922059 + 9.19 0.000 intron (NM_001369, intron 5 of 78) intron (NM_001369, intron 5 of 78) 22526 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr4-2962 chr4 110158888 110159098 + 9.19 0.000 intron (NM_001130721, intron 2 of 4) intron (NM_001130721, intron 2 of 4) 39622 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr4-3395 chr4 39354538 39354748 + 9.19 0.000 intron (NM_001204747, intron 1 of 24) FLAM_A|SINE|Alu 11719 NM_001204747 5981 Hs.507475 NM_002913 ENSG00000035928 RFC1 A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C subunit 1 protein-coding GL383555.2-3 GL383555.2 200678 200888 + 9.19 0.000 NA NA NA NA chr8-3525 chr8 118877505 118877715 + 9.19 0.000 Intergenic LTR16A1|LTR|ERVL 74275 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding chr2-12985 chr2 105404568 105404778 + 9.19 0.000 intron (NM_201557, intron 1 of 5) intron (NM_201557, intron 1 of 5) -5006 NM_001318894 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr20-869 chr20 6048643 6048853 + 9.19 0.000 intron (NM_152611, intron 3 of 4) intron (NM_152611, intron 3 of 4) 5312 NM_152611 164312 Hs.149133 NM_152611 ENSG00000125872 LRRN4 C20orf75|NLRR-4|NLRR4|dJ1056H1.1 leucine rich repeat neuronal 4 protein-coding chr7-3162 chr7 88755174 88755384 + 9.19 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -4421 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chr5-6979 chr5 148089432 148089642 + 9.19 0.000 exon (NM_001127698, exon 7 of 34) exon (NM_001127698, exon 7 of 34) 25557 NM_001127698 11005 Hs.331555 NM_006846 ENSG00000133710 SPINK5 LEKTI|LETKI|NETS|NS|VAKTI serine peptidase inhibitor, Kazal type 5 protein-coding chr15-1372 chr15 84797270 84797480 + 9.19 0.000 intron (NM_014630, intron 5 of 10) intron (NM_014630, intron 5 of 10) -19305 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 CMH27|MAK|MIDORI alpha kinase 3 protein-coding chr2-12071 chr2 31996985 31997195 + 9.19 0.000 intron (NR_126034, intron 1 of 6) MER103C|DNA|hAT-Charlie 13574 NM_001137602 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding chr5-7626 chr5 46157476 46157686 + 9.19 0.000 Intergenic L1PA5|LINE|L1 -461201 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr8-5087 chr8 47061573 47061783 + 9.19 0.000 Intergenic MER57B1|LTR|ERV1 -127629 NR_037168 100287846 Hs.21550 NR_037168 LOC100287846 - uncharacterized LOC100287846 ncRNA chr3-2486 chr3 142728139 142728349 + 9.19 0.000 intron (NM_001251845, intron 1 of 12) intron (NM_001251845, intron 1 of 12) 3820 NM_003304 7220 Hs.250687 NM_003304 ENSG00000144935 TRPC1 HTRP-1|TRP1 transient receptor potential cation channel subfamily C member 1 protein-coding chr11-4887 chr11 46373027 46373237 + 9.19 0.000 intron (NM_201533, intron 14 of 30) MIR|SINE|MIR -3270 NR_039837 100616368 NR_039837 ENSG00000264102 MIR4688 mir-4688 microRNA 4688 ncRNA chr7-6859 chr7 47832198 47832408 + 9.19 0.000 intron (NM_138295, intron 41 of 56) intron (NM_138295, intron 41 of 56) 37012 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr2-9650 chr2 24616866 24617076 + 9.19 0.000 intron (NM_001362950, intron 3 of 23) intron (NM_001362950, intron 3 of 23) 32494 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr22-1157 chr22 50209602 50209812 + 9.19 0.000 intron (NM_031454, intron 3 of 8) intron (NM_031454, intron 3 of 8) 8696 NM_031454 83642 Hs.365405 NM_031454 ENSG00000073169 SELENOO SELO selenoprotein O protein-coding chr16-2813 chr16 67741832 67742042 + 9.19 0.000 intron (NM_001320239, intron 3 of 12) L3|LINE|CR1 -22621 NM_001243650 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr13-1898 chr13 47349837 47350047 + 9.19 0.000 Intergenic Intergenic -452866 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr5-4751 chr5 52787104 52787314 + 9.19 0.000 promoter-TSS (NM_181501) promoter-TSS (NM_181501) -707 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr2-4672 chr2 204948927 204949137 + 9.19 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 403557 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr1-11035 chr1 223067163 223067373 + 9.19 0.000 Intergenic Intergenic 75980 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr20-1444 chr20 50521435 50521645 + 9.19 0.000 intron (NM_001278618, intron 1 of 8) intron (NM_001278618, intron 1 of 8) 11157 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr4-4458 chr4 54382556 54382766 + 9.19 0.000 Intergenic Intergenic 49769 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr11-4530 chr11 118824687 118824897 + 9.19 0.000 Intergenic AluSq2|SINE|Alu -33628 NM_004397 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr4-4909 chr4 122397036 122397246 + 9.19 0.000 intron (NM_001159285, intron 6 of 11) intron (NM_001159285, intron 6 of 11) 17623 NM_001159285 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding chr2-9122 chr2 207467944 207468154 + 9.19 0.000 Intergenic MARNA|DNA|TcMar-Mariner -61913 NR_163947 chr2-9746 chr2 77916487 77916697 + 9.19 0.000 intron (NR_110286, intron 1 of 2) intron (NR_110286, intron 1 of 2) 658 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA chr18-2578 chr18 10258867 10259077 + 9.19 0.000 Intergenic L3b|LINE|CR1 155398 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr22-2802 chr22 42743010 42743220 + 9.19 0.000 Intergenic Intergenic -21814 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr14-1800 chr14 29144827 29145037 + 9.19 0.000 Intergenic Intergenic -359145 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr8-1533 chr8 96268607 96268817 + 9.19 0.000 intron (NM_014754, intron 1 of 12) intron (NM_014754, intron 1 of 12) 6810 NM_001290225 9791 Hs.292579 NM_014754 ENSG00000156471 PTDSS1 LMHD|PSS1|PSSA phosphatidylserine synthase 1 protein-coding chr13-912 chr13 51065264 51065474 + 9.19 0.000 intron (NR_003923, intron 1 of 16) intron (NR_003923, intron 1 of 16) 788 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr7-3441 chr7 716417 716627 + 9.19 0.000 intron (NM_001164759, intron 1 of 10) L2c|LINE|L2 -3315 NM_001164761 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr10-8229 chr10 73702895 73703105 + 9.19 0.000 intron (NR_026592, intron 11 of 11) intron (NR_026592, intron 11 of 11) -5204 NM_001144000 729092 Hs.651147 NM_001144000 ENSG00000172650 AGAP5 CTGLF2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 protein-coding chr2-14040 chr2 194613845 194614055 + 9.19 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -116645 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr4-2290 chr4 10157767 10157977 + 9.19 0.000 Intergenic Intergenic -41073 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr5-2354 chr5 77880046 77880256 + 9.19 0.000 Intergenic MIRb|SINE|MIR -4505 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr6-5945 chr6 75632135 75632345 + 9.19 0.000 intron (NM_001100409, intron 3 of 22) intron (NM_001100409, intron 3 of 22) 30360 NM_015571 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding chr4-4308 chr4 28692953 28693163 + 9.19 0.000 Intergenic Intergenic -126524 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr20-2184 chr20 49417457 49417667 + 9.19 0.000 intron (NM_004975, intron 1 of 1) intron (NM_004975, intron 1 of 1) 65106 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr3-10281 chr3 125006700 125006910 + 9.19 0.000 intron (NM_020733, intron 8 of 16) intron (NM_020733, intron 8 of 16) 49192 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr16-2308 chr16 19704720 19704930 + 9.19 0.000 3' UTR (NM_001348535, exon 4 of 4) 3' UTR (NM_001348535, exon 4 of 4) -11631 NM_001305122 124152 Hs.460217 NM_153208 ENSG00000174628 IQCK - IQ motif containing K protein-coding chr6-4757 chr6 71727888 71728098 + 9.19 0.000 Intergenic Intergenic -158710 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr16-4584 chr16 67547164 67547374 + 9.19 0.000 TTS (NM_001193524) TTS (NM_001193524) 9807 NM_001193524 79567 Hs.152717 NM_024519 ENSG00000039523 RIPOR1 FAM65A RHO family interacting cell polarization regulator 1 protein-coding chrX-2224 chrX 43195305 43195515 + 9.19 0.000 intron (NR_110387, intron 2 of 5) L1ME2|LINE|L1 18416 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr3-4027 chr3 66729283 66729493 + 9.19 0.000 TTS (NR_135533) TTS (NR_135533) 8948 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr1-8728 chr1 233578122 233578332 + 9.19 0.000 Intergenic AluJr|SINE|Alu -35879 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr5-4712 chr5 41039947 41040157 + 9.19 0.000 intron (NM_173489, intron 19 of 41) L2a|LINE|L2 31290 NM_173489 133558 Hs.97714 NM_173489 ENSG00000171495 MROH2B HEATR7B2|SPIF maestro heat like repeat family member 2B protein-coding chr11-9891 chr11 74591326 74591536 + 9.19 0.000 Intergenic AluSx|SINE|Alu -1151 NR_046409 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr11-9029 chr11 26382734 26382944 + 9.19 0.000 intron (NM_031418, intron 1 of 26) intron (NM_031418, intron 1 of 26) 50709 NM_031418 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr3-10701 chr3 152349699 152349909 + 9.19 0.000 intron (NM_001314057, intron 2 of 11) intron (NM_001314057, intron 2 of 11) -8814 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr18-2101 chr18 50192310 50192520 + 9.19 0.000 intron (NM_001080467, intron 1 of 39) HSMAR2|DNA|TcMar-Mariner 2732 NM_001080467 4645 Hs.720076 NM_001080467 ENSG00000167306 MYO5B - myosin VB protein-coding chr15-4123 chr15 79380533 79380743 + 9.19 0.000 intron (NM_001330376, intron 2 of 2) Charlie2a|DNA|hAT-Charlie -51878 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr21-1829 chr21 40955471 40955681 + 9.19 0.000 Intergenic HERVH-int|LTR|ERV1 -108418 NM_001271534 1826 Hs.160418 NM_001389 ENSG00000171587 DSCAM CHD2|CHD2-42|CHD2-52 DS cell adhesion molecule protein-coding chrX-3963 chrX 12405430 12405640 + 9.19 0.000 intron (NM_001368402, intron 2 of 17) intron (NM_001368402, intron 2 of 17) -93145 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr7-2815 chr7 95772462 95772672 + 9.19 0.000 promoter-TSS (NM_001278421) promoter-TSS (NM_001278421) 61 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chrX-4711 chrX 87732231 87732441 + 9.19 0.000 Intergenic Intergenic 214534 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr13-2536 chr13 62397526 62397736 + 9.19 0.000 Intergenic Intergenic 73974 NR_047038 100874180 Hs.7415 NR_047038 ENSG00000229307 LINC00459 - long intergenic non-protein coding RNA 459 ncRNA chr3-8418 chr3 108316089 108316299 + 9.19 0.000 intron (NM_001282557, intron 1 of 9) intron (NM_001282557, intron 1 of 9) 4409 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr11-4584 chr11 130050494 130050704 + 9.19 0.000 Intergenic Intergenic -19295 NM_001328686 334 Hs.370247 NM_001642 ENSG00000084234 APLP2 APLP-2|APPH|APPL2|CDEBP amyloid beta precursor like protein 2 protein-coding chr1-8349 chr1 57815863 57816073 + 9.19 0.000 intron (NM_001353980, intron 3 of 5) intron (NM_001353980, intron 3 of 5) -44613 NR_104362 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr10-2521 chr10 47155879 47156089 + 9.19 0.000 Intergenic (TCTCTG)n|Simple_repeat|Simple_repeat -144213 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr12-6216 chr12 26097191 26097401 + 9.19 0.000 Intergenic Intergenic 27741 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr20-1140 chr20 42020497 42020707 + 9.19 0.000 Intergenic Intergenic -402225 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr4-5350 chr4 184755113 184755323 + 9.19 0.000 TTS (NM_001286711) TTS (NM_001286711) -21122 NR_104593 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr15-3307 chr15 78756264 78756474 + 9.19 0.000 Intergenic Intergenic 4332 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr7-7249 chr7 28185936 28186146 + 9.19 0.000 intron (NR_034097, intron 2 of 3) intron (NR_034097, intron 2 of 3) -5246 NM_175061 221895 Hs.368944 NM_175061 ENSG00000153814 JAZF1 TIP27|ZNF802 JAZF zinc finger 1 protein-coding chr7-4389 chr7 84367981 84368191 + 9.19 0.000 Intergenic Intergenic -164390 NR_110079 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr5-4808 chr5 58521032 58521242 + 9.19 0.000 Intergenic L1PA11|LINE|L1 8972 NR_039639 100616339 NR_039639 ENSG00000265699 MIR548AE2 - microRNA 548ae-2 ncRNA chr3-8812 chr3 7254048 7254258 + 9.19 0.000 intron (NM_000844, intron 2 of 9) MER45A|DNA|hAT-Tip100 281131 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr21-714 chr21 33514382 33514592 + 9.19 0.000 intron (NM_001136006, intron 16 of 21) intron (NM_001136006, intron 16 of 21) -22764 NM_001320746 54943 Hs.458308 NM_017833 ENSG00000177692 DNAJC28 C21orf55|C21orf78 DnaJ heat shock protein family (Hsp40) member C28 protein-coding chr1-8929 chr1 7680458 7680668 + 9.19 0.000 intron (NM_001349613, intron 1 of 11) CpG 475 NM_001349613 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr19-2825 chr19 53793070 53793280 + 9.19 0.000 TTS (NM_001277129) TTS (NM_001277129) 4470 NR_029866 442918 NR_029866 ENSG00000199143 MIR373 MIRN373|hsa-mir-373|miRNA373|mir-373 microRNA 373 ncRNA chrX-3773 chrX 132219500 132219710 + 9.19 0.000 promoter-TSS (NM_001271186) promoter-TSS (NM_001271186) -125 NR_073150 57826 Hs.119889 NM_021183 ENSG00000123728 RAP2C - RAP2C, member of RAS oncogene family protein-coding chr9-5214 chr9 75027039 75027249 + 9.19 0.000 promoter-TSS (NM_001320497) promoter-TSS (NM_001320497) 7 NM_001320497 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding chr19-3139 chr19 19205139 19205349 + 9.19 0.000 Intergenic L2b|LINE|L2 -1830 NM_176880 126382 Hs.708153 NM_176880 ENSG00000184162 NR2C2AP TRA16 nuclear receptor 2C2 associated protein protein-coding chr5-1905 chr5 160342681 160342891 + 9.19 0.000 Intergenic Intergenic -3194 NR_131769 79616 Hs.14070 NM_024565 ENSG00000135083 CCNJL - cyclin J like protein-coding chr13-2573 chr13 69055416 69055626 + 9.19 0.000 Intergenic L1PB4|LINE|L1 -166825 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr20-3341 chr20 25482209 25482419 + 9.19 0.000 intron (NM_025176, intron 13 of 23) intron (NM_025176, intron 13 of 23) 74631 NR_134574 9837 Hs.658464 NM_021067 ENSG00000101003 GINS1 IMD55|PSF1 GINS complex subunit 1 protein-coding chr3-8837 chr3 9072354 9072564 + 9.19 0.000 intron (NM_014850, intron 4 of 21) intron (NM_014850, intron 4 of 21) -108987 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr8-1263 chr8 142493902 142494112 + 9.19 0.000 intron (NM_001702, intron 17 of 30) intron (NM_001702, intron 17 of 30) 44358 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr14-2855 chr14 30607496 30607706 + 9.19 0.000 intron (NM_017769, intron 11 of 14) Tigger3a|DNA|TcMar-Tigger -14653 NM_001283031 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr5-6121 chr5 31585960 31586170 + 9.19 0.000 Intergenic LTR24|LTR|ERV1 -53066 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr4-5805 chr4 83166330 83166540 + 9.19 0.000 Intergenic L1PA5|LINE|L1 -51706 NM_001130715 51316 Hs.546392 NM_016619 ENSG00000145287 PLAC8 C15|DGIC|PNAS-144|onzin placenta associated 8 protein-coding chr12-7564 chr12 74172894 74173104 + 9.19 0.000 intron (NR_038300, intron 4 of 6) intron (NR_038300, intron 4 of 6) 119632 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr15-3962 chr15 43209496 43209706 + 9.19 0.000 intron (NM_001114134, intron 5 of 12) MER5A|DNA|hAT-Charlie 11417 NM_000119 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chr1-5188 chr1 173330487 173330697 + 9.19 0.000 intron (NR_037845, intron 2 of 2) intron (NR_037845, intron 2 of 2) -123261 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr7-8798 chr7 82756174 82756384 + 9.19 0.000 3' UTR (NM_033026, exon 25 of 25) 3' UTR (NM_033026, exon 25 of 25) -312323 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr1-9110 chr1 17122377 17122587 + 9.19 0.000 Intergenic Intergenic -3031 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr10-3234 chr10 110395783 110395993 + 9.19 0.000 Intergenic Intergenic -90968 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr5-8230 chr5 109574075 109574285 + 9.19 0.000 Intergenic MIRb|SINE|MIR -115186 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr10-2341 chr10 71515122 71515332 + 9.19 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -3307 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr14-5168 chr14 91866543 91866753 + 9.19 0.000 intron (NM_001128596, intron 1 of 11) intron (NM_001128596, intron 1 of 11) 888 NM_001128596 123036 Hs.510262 NM_152332 ENSG00000165929 TC2N C14orf47|C2CD1|MTAC2D1|Tac2-N tandem C2 domains, nuclear protein-coding chr9-2331 chr9 26293077 26293287 + 9.19 0.000 Intergenic Intergenic 226507 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr10-4793 chr10 7075961 7076171 + 9.19 0.000 Intergenic LTR16C|LTR|ERVL 110718 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr10-6731 chr10 127796778 127796988 + 9.19 0.000 Intergenic Intergenic 59698 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr10-3832 chr10 133541106 133541316 + 9.19 0.000 Intergenic LTR5_Hs|LTR|ERVK 13848 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr10-5629 chr10 96181730 96181940 + 9.19 0.000 intron (NR_138482, intron 3 of 4) L1PA5|LINE|L1 51213 NM_001330734 9849 Hs.600823 NM_014803 ENSG00000177853 ZNF518A ZNF518 zinc finger protein 518A protein-coding chr13-2433 chr13 46684964 46685174 + 9.19 0.000 intron (NM_001164213, intron 4 of 18) intron (NM_001164213, intron 4 of 18) 112092 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr16-4897 chr16 88977577 88977787 + 9.19 0.000 promoter-TSS (NM_005187) promoter-TSS (NM_005187) -475 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr17-3239 chr17 19003436 19003646 + 9.19 0.000 exon (NM_001039999, exon 2 of 6) exon (NM_001039999, exon 2 of 6) 1223 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr2-12323 chr2 47692392 47692602 + 9.19 0.000 Intergenic AluJb|SINE|Alu -90585 NM_001281492 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr2-5593 chr2 176804855 176805065 + 9.19 0.000 Intergenic Intergenic 167206 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr20-1417 chr20 34989934 34990144 + 9.19 0.000 promoter-TSS (NR_030223) promoter-TSS (NR_030223) -337 NR_030223 574501 NR_030223 ENSG00000207635 MIR499A MIR499|MIRN499|hsa-mir-499a|mir-499a microRNA 499a ncRNA chr5-5940 chr5 80196112 80196322 + 9.19 0.000 intron (NR_126061, intron 2 of 13) intron (NR_126061, intron 2 of 13) 59831 NM_178276 256987 Hs.288232 NM_178276 ENSG00000164300 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding chr9-8740 chr9 132747216 132747426 + 9.19 0.000 intron (NM_001317959, intron 13 of 14) AluSc|SINE|Alu 76857 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr1-16592 chr1 236661264 236661474 + 9.19 0.000 Intergenic L1MC2|LINE|L1 -25085 NM_001103 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr6-4298 chr6 14438048 14438258 + 9.19 0.000 Intergenic ERVL-B4-int|LTR|ERVL -152699 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr5-6007 chr5 144755632 144755842 + 9.19 0.000 Intergenic Intergenic 550346 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr7-5816 chr7 83187301 83187511 + 9.19 0.000 Intergenic Intergenic -24522 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr1-6203 chr1 206846273 206846483 + 9.19 0.000 Intergenic L1MA2|LINE|L1 12029 NM_001369605 29949 Hs.661017 NM_013371 ENSG00000142224 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding chr10-5485 chr10 80196167 80196377 + 9.19 0.000 intron (NM_001278408, intron 1 of 16) intron (NM_001278408, intron 1 of 16) 8219 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr14-2566 chr14 36337950 36338160 + 9.19 0.000 Intergenic Intergenic -17379 NM_001144891 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr5-8943 chr5 159262517 159262727 + 9.19 0.000 promoter-TSS (NM_145049) promoter-TSS (NM_145049) -668 NM_145049 134510 Hs.591733 NM_145049 ENSG00000164332 UBLCP1 CPUB1 ubiquitin like domain containing CTD phosphatase 1 protein-coding chr15-1485 chr15 39942260 39942470 + 9.19 0.000 intron (NM_001013703, intron 2 of 38) intron (NM_001013703, intron 2 of 38) 8250 NM_001013703 440275 Hs.656673 NM_001013703 ENSG00000128829 EIF2AK4 GCN2|PVOD2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding chr6-5016 chr6 110052204 110052414 + 9.19 0.000 Intergenic Intergenic 73998 NM_005284 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr5-2000 chr5 181235363 181235573 + 9.19 0.000 non-coding (NR_045218, exon 7 of 7) non-coding (NR_045218, exon 7 of 7) 6421 NR_002592 619571 NR_002592 ENSG00000272296 SNORD96A U96A small nucleolar RNA, C/D box 96A snoRNA chr1-8101 chr1 7715557 7715767 + 9.19 0.000 intron (NM_001349624, intron 1 of 11) intron (NM_001349624, intron 1 of 11) 10926 NM_001349616 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr11-6942 chr11 111355698 111355908 + 9.19 0.000 intron (NM_006235, intron 4 of 4) intron (NM_006235, intron 4 of 4) 8046 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chr8-1618 chr8 27334727 27334937 + 9.19 0.000 intron (NM_173175, intron 1 of 29) intron (NM_173175, intron 1 of 29) 9268 NM_173175 2185 Hs.491322 NM_004103 ENSG00000120899 PTK2B CADTK|CAKB|FADK2|FAK2|PKB|PTK|PYK2|RAFTK protein tyrosine kinase 2 beta protein-coding chr6-3479 chr6 5657529 5657739 + 9.19 0.000 intron (NM_006567, intron 6 of 6) intron (NM_006567, intron 6 of 6) 37638 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr14-5200 chr14 95294280 95294490 + 9.19 0.000 intron (NM_024734, intron 1 of 12) intron (NM_024734, intron 1 of 12) 25523 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr3-4153 chr3 123634404 123634614 + 9.19 0.000 intron (NM_001321309, intron 28 of 32) intron (NM_001321309, intron 28 of 32) -13961 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr16-2451 chr16 85259405 85259615 + 9.19 0.000 Intergenic Intergenic -23448 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr5-3198 chr5 80112594 80112804 + 9.19 0.000 intron (NR_126061, intron 13 of 13) AluJo|SINE|Alu -29034 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr13-3988 chr13 66565308 66565518 + 9.19 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) -259756 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr6-2877 chr6 7155725 7155935 + 9.19 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 47869 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr3-8046 chr3 198028111 198028321 + 9.19 0.000 intron (NR_026786, intron 15 of 16) L1MC1|LINE|L1 11251 NR_046669 100873947 Hs.637166 NR_046669 ENSG00000232832 LMLN-AS1 - LMLN antisense RNA 1 ncRNA chr17-4858 chr17 63758113 63758323 + 9.19 0.000 intron (NM_020198, intron 6 of 12) MER21C|LTR|ERVL 15379 NM_020198 57003 Hs.202011 NM_020198 ENSG00000108588 CCDC47 GK001|MSTP041|THNS coiled-coil domain containing 47 protein-coding chr11-2079 chr11 86151652 86151862 + 9.19 0.000 Intergenic Intergenic -81897 NM_001206947 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr11-8913 chr11 16945490 16945700 + 9.19 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -19573 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr12-6224 chr12 27493540 27493750 + 9.19 0.000 intron (NM_001145010, intron 6 of 8) intron (NM_001145010, intron 6 of 8) 26835 NM_001145010 341346 Hs.282121 NM_001145010 ENSG00000165935 SMCO2 C12orf70 single-pass membrane protein with coiled-coil domains 2 protein-coding chr9-6297 chr9 135711191 135711401 + 9.19 0.000 intron (NM_001272003, intron 1 of 30) intron (NM_001272003, intron 1 of 30) 9111 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr15-4942 chr15 78150998 78151208 + 9.19 0.000 intron (NM_005530, intron 1 of 10) MIR3|SINE|MIR 1741 NM_005530 3419 Hs.591110 NM_005530 ENSG00000166411 IDH3A - isocitrate dehydrogenase (NAD(+)) 3 alpha protein-coding chr19-4591 chr19 12560874 12561084 + 9.19 0.000 Intergenic Intergenic -9497 NM_144976 163050 Hs.655615 NM_144976 ENSG00000249709 ZNF564 - zinc finger protein 564 protein-coding chr7-8902 chr7 93315999 93316209 + 9.19 0.000 intron (NM_001257998, intron 21 of 28) L2c|LINE|L2 83738 NM_017667 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr4-6450 chr4 139596147 139596357 + 9.19 0.000 Intergenic Intergenic -39483 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr6-7112 chr6 34883618 34883828 + 9.19 0.000 intron (NM_001270488, intron 1 of 3) intron (NM_001270488, intron 1 of 3) 4319 NM_005643 6882 Hs.112444 NM_005643 ENSG00000064995 TAF11 MGC:15243|PRO2134|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding chr22-1799 chr22 32120544 32120754 + 9.19 0.000 Intergenic REP522|Satellite|telo -1328 NR_040114 23782 Hs.581098 NR_040114 ENSG00000234479 AP1B1P1 ADTB1L1|dJ127L4.2 AP1B1 pseudogene 1 pseudo chr2-5178 chr2 32425329 32425539 + 9.19 0.000 intron (NM_016252, intron 10 of 73) L1MB4|LINE|L1 68406 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr17-4703 chr17 29617194 29617404 + 9.19 0.000 5' UTR (NM_001351301, exon 2 of 7) 5' UTR (NM_001351301, exon 2 of 7) 818 NM_001351301 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chr1-6999 chr1 168179720 168179930 + 9.19 0.000 intron (NM_152902, intron 1 of 6) intron (NM_152902, intron 1 of 6) 863 NM_152902 261726 Hs.209431 NM_152902 ENSG00000143155 TIPRL TIP|TIP41|TIPRL1 TOR signaling pathway regulator protein-coding chr17-4694 chr17 28776610 28776820 + 9.19 0.000 intron (NM_001288633, intron 1 of 3) AluJb|SINE|Alu 32704 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr16-6872 chr16 84086952 84087162 + 9.19 0.000 intron (NM_003791, intron 9 of 22) L4_C_Mam|LINE|RTE-X 29885 NM_003791 8720 Hs.75890 NM_003791 ENSG00000140943 MBTPS1 PCSK8|S1P|SEDKF|SKI-1 membrane bound transcription factor peptidase, site 1 protein-coding chr1-10541 chr1 171157137 171157347 + 9.19 0.000 intron (NR_002601, intron 6 of 6) Tigger2|DNA|TcMar-Tigger 19502 NR_002601 388714 Hs.448988 NR_002601 ENSG00000117507 FMO6P FMO6 flavin containing dimethylaniline monoxygenase 6, pseudogene pseudo chr5-1624 chr5 115961422 115961632 + 9.19 0.000 promoter-TSS (NM_173800) promoter-TSS (NM_173800) -948 NM_173800 206338 Hs.98288 NM_173800 ENSG00000172901 LVRN APQ|AQPEP|TAQPEP laeverin protein-coding chr4-902 chr4 105146497 105146707 + 9.19 0.000 promoter-TSS (NM_001127208) promoter-TSS (NM_001127208) -83 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr2-10232 chr2 110981496 110981706 + 9.19 0.000 intron (NM_001371254, intron 13 of 18) intron (NM_001371254, intron 13 of 18) 133987 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr9-5531 chr9 107993125 107993335 + 9.19 0.000 Intergenic Intergenic -503461 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr6-4160 chr6 617746 617956 + 9.19 0.000 intron (NM_018303, intron 5 of 27) intron (NM_018303, intron 5 of 27) 39113 NM_148959 135458 Hs.669039 NM_148959 ENSG00000188996 HUS1B - HUS1 checkpoint clamp component B protein-coding chr12-6312 chr12 52735937 52736147 + 9.19 0.000 Intergenic Intergenic -32518 NM_175078 374454 Hs.334989 NM_175078 ENSG00000189182 KRT77 K1B|KRT1B keratin 77 protein-coding chrX-5001 chrX 118603980 118604190 + 9.19 0.000 intron (NM_144658, intron 23 of 52) MER20|DNA|hAT-Charlie 108176 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr11-5249 chr11 28963297 28963507 + 9.19 0.000 Intergenic L3|LINE|CR1 -485854 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr8-4224 chr8 86714043 86714253 + 9.19 0.000 intron (NM_019098, intron 3 of 17) L1MC1|LINE|L1 29527 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding chr12-2336 chr12 3085801 3086011 + 9.19 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 8527 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr12-5123 chr12 98150690 98150900 + 9.19 0.000 Intergenic Intergenic -155347 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr9-5325 chr9 87546753 87546963 + 9.19 0.000 intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) -6596 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr9-5859 chr9 130655134 130655344 + 9.19 0.000 Intergenic Intergenic -9355 NM_021619 59335 Hs.495311 NM_021619 ENSG00000130711 PRDM12 HSAN8|PFM9 PR/SET domain 12 protein-coding chr8-2674 chr8 87759228 87759438 + 9.19 0.000 Intergenic MER76|LTR|ERVL 114682 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr10-2360 chr10 92689607 92689817 + 9.19 0.000 promoter-TSS (NM_002729) promoter-TSS (NM_002729) -243 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr19-4719 chr19 19146297 19146507 + 9.19 0.000 intron (NM_001145785, intron 7 of 8) intron (NM_001145785, intron 7 of 8) -7924 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr1-9242 chr1 23896308 23896518 + 9.19 0.000 intron (NM_001841, intron 1 of 1) MIRb|SINE|MIR 16949 NM_001841 1269 Hs.73037 NM_001841 ENSG00000188822 CNR2 CB-2|CB2|CX5 cannabinoid receptor 2 protein-coding chr4-4705 chr4 87910164 87910374 + 9.19 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -65381 NM_001040060 6696 Hs.313 NM_000582 ENSG00000118785 SPP1 BNSP|BSPI|ETA-1|OPN secreted phosphoprotein 1 protein-coding chr3-9703 chr3 65751394 65751604 + 9.19 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -142317 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr22-2315 chr22 38353815 38354025 + 9.19 0.000 intron (NR_002821, intron 4 of 4) intron (NR_002821, intron 4 of 4) -35836 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr8-5940 chr8 19360808 19361018 + 9.19 0.000 intron (NR_156444, intron 5 of 8) MIRb|SINE|MIR 46937 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr16-5202 chr16 12673375 12673585 + 9.19 0.000 intron (NM_001099455, intron 2 of 2) intron (NM_001099455, intron 2 of 2) -46841 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr18-1637 chr18 55630922 55631132 + 9.19 0.000 intron (NM_001243226, intron 2 of 20) L2b|LINE|L2 4930 NM_001243226 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr4-1647 chr4 98290573 98290783 + 9.19 0.000 intron (NM_001100427, intron 1 of 14) intron (NM_001100427, intron 1 of 14) 29294 NM_001100426 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding chr3-4012 chr3 61858143 61858353 + 9.19 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 296677 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr14-2845 chr14 28651415 28651625 + 9.19 0.000 Intergenic Intergenic 113799 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr17-5957 chr17 76482337 76482547 + 9.19 0.000 intron (NM_024599, intron 2 of 18) FLAM_C|SINE|Alu 5467 NM_001005498 79651 Hs.464157 NM_024599 ENSG00000129667 RHBDF2 RHBDL5|RHBDL6|TEC|TOC|TOCG|iRhom2 rhomboid 5 homolog 2 protein-coding chr10-5630 chr10 96238206 96238416 + 9.19 0.000 intron (NM_013314, intron 3 of 16) intron (NM_013314, intron 3 of 16) 33205 NM_001258442 29760 Hs.665244 NM_013314 ENSG00000095585 BLNK AGM4|BASH|BLNK-S|LY57|SLP-65|SLP65|bca B cell linker protein-coding chr2-12928 chr2 101328657 101328867 + 9.19 0.000 Intergenic L2|LINE|L2 19312 NR_049881 100847007 NR_049881 ENSG00000264857 MIR5696 - microRNA 5696 ncRNA chr8-2536 chr8 26457999 26458209 + 9.19 0.000 Intergenic Intergenic 55768 NM_007257 10687 Hs.591838 NM_007257 ENSG00000240694 PNMA2 MA2|MM2|RGAG2 PNMA family member 2 protein-coding chr8-2552 chr8 30249546 30249756 + 9.19 0.000 Intergenic Intergenic 93282 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr14-5433 chr14 105061243 105061453 + 9.19 0.000 intron (NM_001278694, intron 1 of 4) intron (NM_001278694, intron 1 of 4) 4082 NM_001278696 29933 Hs.532504 NM_013345 ENSG00000183484 GPR132 G2A G protein-coupled receptor 132 protein-coding chr13-4189 chr13 90104952 90105162 + 9.19 0.000 intron (NR_047489, intron 3 of 5) L1MA4A|LINE|L1 14660 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr17-5889 chr17 72391293 72391503 + 9.19 0.000 Intergenic MIR|SINE|MIR 48587 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr18-2997 chr18 24489015 24489225 + 9.19 0.000 Intergenic Intergenic 28483 NM_021624 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr10-2799 chr10 133332570 133332780 + 9.19 0.000 intron (NM_001321617, intron 1 of 5) MLT1C|LTR|ERVL-MaLR 4221 NM_015722 50632 Hs.148680 NM_015722 ENSG00000130643 CALY DRD1IP|NSG3 calcyon neuron specific vesicular protein protein-coding chr12-6852 chr12 16076627 16076837 + 9.19 0.000 Intergenic LTR41C|LTR|ERVL 165400 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr9-4470 chr9 32954685 32954895 + 9.19 0.000 Intergenic Intergenic 46786 NM_001195249 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr10-4036 chr10 18737946 18738156 + 9.19 0.000 Intergenic Intergenic 78620 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding chr5-6630 chr5 42632344 42632554 + 9.19 0.000 intron (NM_001242403, intron 3 of 9) intron (NM_001242403, intron 3 of 9) 66585 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr2-14260 chr2 214086140 214086350 + 9.19 0.000 intron (NR_047660, intron 12 of 14) intron (NR_047660, intron 12 of 14) -324809 NM_001080500 402117 Hs.534834 NM_001080500 ENSG00000174453 VWC2L - von Willebrand factor C domain containing 2 like protein-coding chr16-3391 chr16 68514483 68514693 + 9.19 0.000 Intergenic Intergenic -24625 NM_001305204 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr11-7171 chr11 129396930 129397140 + 9.19 0.000 intron (NM_003658, intron 1 of 3) AluJo|SINE|Alu 21187 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr12-4387 chr12 5575462 5575672 + 9.19 0.000 intron (NM_001278596, intron 24 of 25) Tigger3a|DNA|TcMar-Tigger 81435 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr9-3094 chr9 34646186 34646396 + 9.19 0.000 promoter-TSS (NM_000155) promoter-TSS (NM_000155) -298 NM_001258332 2592 Hs.522090 NM_000155 ENSG00000213930 GALT - galactose-1-phosphate uridylyltransferase protein-coding chr12-7714 chr12 91215730 91215940 + 9.19 0.000 Intergenic L2c|LINE|L2 -33018 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr10-4000 chr10 132757178 132757388 + 9.19 0.000 intron (NM_005539, intron 11 of 15) Tigger3b|DNA|TcMar-Tigger 28864 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr10-7774 chr10 34967354 34967564 + 9.19 0.000 Intergenic Intergenic 106824 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr16-3613 chr16 83003715 83003925 + 9.19 0.000 intron (NM_001220490, intron 2 of 12) Charlie30a|DNA|hAT-Charlie -13522 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr1-5978 chr1 40309346 40309556 + 9.19 0.000 intron (NM_001852, intron 16 of 31) intron (NM_001852, intron 16 of 31) 7835 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr11-5664 chr11 128328488 128328698 + 9.19 0.000 Intergenic Intergenic 119827 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr19-2564 chr19 56109139 56109349 + 9.19 0.000 intron (NM_001002836, intron 1 of 2) intron (NM_001002836, intron 1 of 2) 12051 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr6-5483 chr6 162281797 162282007 + 9.19 0.000 intron (NM_004562, intron 2 of 11) MER1B|DNA|hAT-Charlie -445230 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr2-8134 chr2 81112649 81112859 + 9.19 0.000 Intergenic L1PREC2|LINE|L1 354192 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr17-4794 chr17 49108411 49108621 + 9.19 0.000 Intergenic Intergenic -23944 NM_001159388 124872 Hs.374679 NM_153446 ENSG00000167080 B4GALNT2 B4GALT|GALGT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 protein-coding chr2-11383 chr2 213221885 213222095 + 9.19 0.000 Intergenic LTR16A2|LTR|ERVL -54280 NR_146974 105373863 Hs.258045 NR_146974 LINC01953 - long intergenic non-protein coding RNA 1953 ncRNA chr3-5753 chr3 21409082 21409292 + 9.19 0.000 Intergenic LTR86A2|LTR|ERVL 3461 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr7-5907 chr7 96738764 96738974 + 9.19 0.000 Intergenic Intergenic -28978 NM_006304 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr6-2787 chr6 142985367 142985577 + 9.19 0.000 intron (NR_038987, intron 2 of 2) intron (NR_038987, intron 2 of 2) -40296 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr2-3882 chr2 41963756 41963966 + 9.19 0.000 Intergenic Intergenic -10055 NR_161189 400950 Hs.738713 NM_001242815 ENSG00000205086 C2orf91 - chromosome 2 open reading frame 91 ncRNA chr6-1101 chr6 93419646 93419856 + 9.19 0.000 promoter-TSS (NM_001288629) promoter-TSS (NM_001288629) -169 NM_001288630 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr2-8634 chr2 145022086 145022296 + 9.19 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 354224 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr10-3039 chr10 121603368 121603578 + 9.19 0.000 Intergenic MER44A|DNA|TcMar-Tigger -5015 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr3-2425 chr3 5071156 5071366 + 9.19 0.000 Intergenic Intergenic -51031 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr2-7244 chr2 227570729 227570939 + 9.19 0.000 Intergenic L2c|LINE|L2 47821 NR_149019 729968 Hs.689550 NR_149019 LOC729968 - spore coat protein SP96 ncRNA chr12-6442 chr12 89623412 89623622 + 9.19 0.000 intron (NM_001001323, intron 9 of 21) L2a|LINE|L2 85321 NM_001366532 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr9-5584 chr9 113751007 113751217 + 9.19 0.000 Intergenic L1M7|LINE|L1 -125170 NM_001318040 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr3-4225 chr3 135529878 135530088 + 9.19 0.000 Intergenic Intergenic -435745 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr2-9261 chr2 219987840 219988050 + 9.19 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -81380 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr10-2894 chr10 113048547 113048757 + 9.19 0.000 intron (NM_001198528, intron 4 of 14) intron (NM_001198528, intron 4 of 14) 3297 NR_132769 106635520 NR_132769 SNORA87 - small nucleolar RNA, H/ACA box 87 snoRNA chr22-2245 chr22 27220325 27220535 + 9.19 0.000 TTS (NM_001350812) TTS (NM_001350812) 4249 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr13-2465 chr13 50326764 50326974 + 9.19 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 154851 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr7-6318 chr7 140805546 140805756 + 9.19 0.000 intron (NR_148928, intron 6 of 17) intron (NR_148928, intron 6 of 17) -108574 NR_024454 100134713 Hs.534141 NR_024454 ENSG00000240889 NDUFB2-AS1 - NDUFB2 antisense RNA 1 ncRNA chr3-6444 chr3 104606752 104606962 + 9.19 0.000 Intergenic L2a|LINE|L2 -759856 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr10-7900 chr10 50160061 50160271 + 9.19 0.000 Intergenic LTR16B1|LTR|ERVL 88444 NM_019893 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr15-5207 chr15 95383093 95383303 + 9.19 0.000 Intergenic L1MC2|LINE|L1 -49895 NR_027133 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr11-6207 chr11 46149597 46149807 + 9.19 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -22253 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chr9-4389 chr9 136171828 136172038 + 9.19 0.000 Intergenic Intergenic 29741 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr7-2264 chr7 1518691 1518901 + 9.19 0.000 Intergenic AluSz6|SINE|Alu -11906 NM_002360 7975 Hs.520612 NM_002360 ENSG00000198517 MAFK NFE2U|P18 MAF bZIP transcription factor K protein-coding chr7-5120 chr7 4766243 4766453 + 9.19 0.000 3' UTR (NM_001037165, exon 9 of 9) 3' UTR (NM_001037165, exon 9 of 9) -9275 NM_014855 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 subunit zeta 1 protein-coding chr9-2709 chr9 87543366 87543576 + 9.19 0.000 intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) -9983 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr7-8013 chr7 17521021 17521231 + 9.19 0.000 intron (NR_110013, intron 1 of 3) intron (NR_110013, intron 1 of 3) 37783 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr16-5585 chr16 50207436 50207646 + 9.19 0.000 intron (NM_001365324, intron 1 of 11) intron (NM_001365324, intron 1 of 11) 54060 NM_001365324 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr22-1794 chr22 31345749 31345959 + 9.19 0.000 promoter-TSS (NR_120386) promoter-TSS (NR_120386) 492 NM_032052 23598 Hs.731398 NM_014323 ENSG00000100105 PATZ1 MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23 POZ/BTB and AT hook containing zinc finger 1 protein-coding chr15-2805 chr15 37891249 37891459 + 9.19 0.000 Intergenic L3b|LINE|CR1 -43253 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr11-3626 chr11 73646193 73646403 + 9.19 0.000 promoter-TSS (NM_001130033) promoter-TSS (NM_001130033) -283 NM_001130033 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr8-4065 chr8 64756866 64757076 + 9.19 0.000 intron (NM_004820, intron 1 of 5) intron (NM_004820, intron 1 of 5) 41766 NM_001324112 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr12-6489 chr12 103884363 103884573 + 9.19 0.000 intron (NR_027249, intron 7 of 15) intron (NR_027249, intron 7 of 15) -43234 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr22-1753 chr22 24715959 24716169 + 9.19 0.000 Intergenic Intergenic -48437 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo chr5-7171 chr5 4964778 4964988 + 9.19 0.000 Intergenic L1MC3|LINE|L1 -69476 NR_026994 340094 Hs.665092 NR_026994 ENSG00000215231 LINC01020 - long intergenic non-protein coding RNA 1020 ncRNA chr12-5699 chr12 109637451 109637661 + 9.19 0.000 Intergenic Intergenic 63762 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr18-1544 chr18 22710246 22710456 + 9.19 0.000 Intergenic Intergenic 76486 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr2-11674 chr2 7422906 7423116 + 9.19 0.000 intron (NR_038432, intron 1 of 5) intron (NR_038432, intron 1 of 5) 1750 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr19-3215 chr19 55247782 55247992 + 9.19 0.000 intron (NM_014931, intron 1 of 23) intron (NM_014931, intron 1 of 23) -2637 NR_106861 102466739 NR_106861 ENSG00000278264 MIR6803 hsa-mir-6803 microRNA 6803 ncRNA chr1-9008 chr1 10926192 10926402 + 9.19 0.000 Intergenic MER110A|LTR|ERV1 40390 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr2-3836 chr2 27832525 27832735 + 9.19 0.000 intron (NM_022128, intron 6 of 7) intron (NM_022128, intron 6 of 7) -56079 NM_001329112 9577 Hs.258314 NM_004899 ENSG00000158019 BABAM2 BRCC4|BRCC45|BRE BRISC and BRCA1 A complex member 2 protein-coding chr8-5668 chr8 117187074 117187284 + 9.19 0.000 Intergenic L1MEc|LINE|L1 52184 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr2-8235 chr2 96984846 96985056 + 9.19 0.000 intron (NM_001122646, intron 1 of 16) MER104|DNA|TcMar-Tc2 1629 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr9-3468 chr9 5910496 5910706 + 9.19 0.000 TTS (NM_005511) TTS (NM_005511) 19712 NM_005511 2315 Hs.154069 NM_005511 ENSG00000120215 MLANA MART-1|MART1 melan-A protein-coding chr12-4207 chr12 102901994 102902204 + 9.19 0.000 intron (NM_000277, intron 2 of 12) L2a|LINE|L2 15145 NM_000277 5053 Hs.560019 NM_000277 ENSG00000171759 PAH PH|PKU|PKU1 phenylalanine hydroxylase protein-coding chr10-1466 chr10 97553643 97553853 + 9.19 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) -18693 NM_001291218 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr8-3069 chr8 18342681 18342891 + 9.19 0.000 Intergenic L1MB1|LINE|L1 -48496 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr12-6795 chr12 10369614 10369824 + 9.19 0.000 intron (NR_120430, intron 1 of 3) HERVIP10F-int|LTR|ERV1 5950 NR_120430 101928100 Hs.638425 NR_120430 ENSG00000245648 LOC101928100 - uncharacterized LOC101928100 ncRNA chr5-1744 chr5 176634071 176634281 + 9.19 0.000 intron (NM_001099408, intron 1 of 8) L2c|LINE|L2 3501 NM_001099408 253314 Hs.448362 NM_001099408 ENSG00000175766 EIF4E1B - eukaryotic translation initiation factor 4E family member 1B protein-coding chrX-4409 chrX 53236259 53236469 + 9.19 0.000 exon (NM_015075, exon 13 of 14) exon (NM_015075, exon 13 of 14) -10942 NM_001353984 8242 Hs.631768 NM_004187 ENSG00000126012 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine demethylase 5C protein-coding chr14-3680 chr14 99981857 99982067 + 9.19 0.000 intron (NM_001330221, intron 1 of 13) intron (NM_001330221, intron 1 of 13) 10540 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr12-3407 chr12 106894971 106895181 + 9.19 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -60646 NM_001319666 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr2-10717 chr2 28778943 28779153 + 9.19 0.000 intron (NM_206876, intron 4 of 8) intron (NM_206876, intron 4 of 8) 27218 NM_002709 5500 Hs.702907 NM_002709 ENSG00000213639 PPP1CB HEL-S-80p|NSLH2|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1 catalytic subunit beta protein-coding chr9-6996 chr9 113276203 113276413 + 9.19 0.000 promoter-TSS (NM_139286) promoter-TSS (NM_139286) 674 NM_001244926 9128 Hs.744014 NM_004697 ENSG00000136875 PRPF4 HPRP4|HPRP4P|PRP4|Prp4p|RP70|SNRNP60 pre-mRNA processing factor 4 protein-coding chr16-2294 chr16 11257368 11257578 + 9.19 0.000 Intergenic Intergenic -1291 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr2-13127 chr2 116696237 116696447 + 9.19 0.000 Intergenic L3b|LINE|CR1 -1118349 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr11-6071 chr11 32804996 32805206 + 9.19 0.000 Intergenic Intergenic -10443 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr22-3014 chr22 22825200 22825410 + 9.19 0.000 Intergenic Intergenic 2529 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr3-4548 chr3 135749666 135749876 + 9.19 0.000 Intergenic Intergenic -215957 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr1-10000 chr1 84991506 84991716 + 9.19 0.000 intron (NM_001330647, intron 1 of 14) intron (NM_001330647, intron 1 of 14) 5502 NM_001330647 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr4-4435 chr4 52660069 52660279 + 9.19 0.000 promoter-TSS (NM_022832) promoter-TSS (NM_022832) 768 NR_125363 643783 Hs.631514 NR_125363 ENSG00000248866 USP46-AS1 - USP46 antisense RNA 1 ncRNA chr5-9006 chr5 165187470 165187680 + 9.19 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 717296 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr1-6738 chr1 66564485 66564695 + 9.19 0.000 intron (NM_001350218, intron 1 of 22) intron (NM_001350218, intron 1 of 22) 30437 NM_001350217 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr5-9194 chr5 179920654 179920864 + 9.19 0.000 Intergenic Intergenic -12862 NM_198868 23061 Hs.155829 NM_015043 ENSG00000197226 TBC1D9B GRAMD9B TBC1 domain family member 9B protein-coding chr1-4431 chr1 227730363 227730573 + 9.19 0.000 TTS (NM_001161465) TTS (NM_001161465) 1950 NR_136654 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr5-3036 chr5 16616855 16617065 + 9.19 0.000 promoter-TSS (NM_001034850) promoter-TSS (NM_001034850) 98 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr22-2908 chr22 46452729 46452939 + 9.19 0.000 intron (NM_014246, intron 2 of 34) intron (NM_014246, intron 2 of 34) 84786 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr7-8120 chr7 26815424 26815634 + 9.19 0.000 intron (NM_003930, intron 4 of 12) UCON31|Unknown|Unknown 42194 NM_001303468 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr6-3324 chr6 169225367 169225577 + 9.19 0.000 intron (NM_003247, intron 17 of 22) intron (NM_003247, intron 17 of 22) 12260 NR_134621 101929523 Hs.442696 NR_134621 ENSG00000226445 LOC101929523 - uncharacterized LOC101929523 ncRNA chr2-5803 chr2 231104132 231104342 + 9.19 0.000 intron (NM_001191037, intron 16 of 23) intron (NM_001191037, intron 16 of 23) 20805 NM_000867 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chr16-3503 chr16 12112854 12113064 + 9.19 0.000 intron (NM_032167, intron 11 of 20) intron (NM_032167, intron 11 of 20) 136225 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr9-2983 chr9 37747151 37747361 + 9.19 0.000 TTS (NM_014907) TTS (NM_014907) -6547 NM_001286950 158234 Hs.655614 NM_144964 ENSG00000165275 TRMT10B RG9MTD3|bA3J10.9 tRNA methyltransferase 10B protein-coding chr3-9305 chr3 43456658 43456868 + 9.19 0.000 intron (NM_001346464, intron 12 of 13) intron (NM_001346464, intron 12 of 13) -104801 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chr18-3130 chr18 38303266 38303476 + 9.19 0.000 Intergenic Intergenic 646236 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr11-3165 chr11 61762224 61762434 + 9.19 0.000 intron (NM_013279, intron 1 of 25) intron (NM_013279, intron 1 of 25) -4665 NR_026882 26070 Hs.564254 NR_026882 ENSG00000124915 MYRF-AS1 DKFZP434K028 MYRF antisense RNA 1 ncRNA chr7-7495 chr7 100639382 100639592 + 9.19 0.000 intron (NM_003227, intron 3 of 17) L1M5|LINE|L1 2065 NM_003227 7036 Hs.544932 NM_003227 ENSG00000106327 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding chr6-5822 chr6 19757519 19757729 + 9.19 0.000 intron (NR_134651, intron 2 of 3) AluSx1|SINE|Alu 47135 NR_134651 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr7-8139 chr7 28175783 28175993 + 9.19 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -4569 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr15-4868 chr15 75420808 75421018 + 9.19 0.000 intron (NM_015477, intron 3 of 20) intron (NM_015477, intron 3 of 20) 30777 NM_001145358 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding chr13-4196 chr13 91206435 91206645 + 9.19 0.000 intron (NR_047004, intron 1 of 3) (TAGA)n|Simple_repeat|Simple_repeat 5158 NR_047004 100874150 Hs.711947 NR_047004 LINC00379 - long intergenic non-protein coding RNA 379 ncRNA chr16-2341 chr16 48365064 48365274 + 9.19 0.000 intron (NM_003031, intron 1 of 1) intron (NM_003031, intron 1 of 1) 718 NM_001006610 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr2-10659 chr2 19322017 19322227 + 9.19 0.000 Intergenic Intergenic -26307 NR_039914 100616307 NR_039914 ENSG00000266738 MIR4757 - microRNA 4757 ncRNA chr1-11126 chr1 232854211 232854421 + 9.19 0.000 Intergenic Intergenic 49424 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr10-3546 chr10 76738819 76739029 + 9.19 0.000 Intergenic Intergenic -149120 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr9-3122 chr9 78526419 78526629 + 9.19 0.000 Intergenic Intergenic 229399 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr3-4511 chr3 100882584 100882794 + 9.19 0.000 intron (NM_001349332, intron 6 of 35) intron (NM_001349332, intron 6 of 35) 110801 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr6-3159 chr6 115542280 115542490 + 9.19 0.000 Intergenic Intergenic 101450 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr9-8343 chr9 116317147 116317357 + 9.19 0.000 intron (NM_002581, intron 10 of 21) intron (NM_002581, intron 10 of 21) 83354 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr19-4511 chr19 7640841 7641051 + 9.19 0.000 exon (NM_001272034, exon 6 of 19) exon (NM_001272034, exon 6 of 19) 3836 NM_001272034 6813 Hs.515104 NM_006949 ENSG00000076944 STXBP2 FHL5|Hunc18b|MUNC18-2|UNC18-2|UNC18B|pp10122 syntaxin binding protein 2 protein-coding chr6-4834 chr6 83600730 83600940 + 9.19 0.000 intron (NM_001242792, intron 15 of 28) intron (NM_001242792, intron 15 of 28) 88301 NM_001170423 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr14-4378 chr14 27427434 27427644 + 9.19 0.000 intron (NR_148991, intron 2 of 2) intron (NR_148991, intron 2 of 2) -185049 NR_039992 100505967 Hs.668484 NR_039992 ENSG00000258548 LINC00645 - long intergenic non-protein coding RNA 645 ncRNA chr7-2634 chr7 1802497 1802707 + 9.19 0.000 Intergenic AluSx1|SINE|Alu 41651 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr3-6658 chr3 129021255 129021465 + 9.19 0.000 intron (NM_024768, intron 2 of 7) MER20B|DNA|hAT-Charlie -17358 NM_001348521 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chrX-1860 chrX 115409010 115409220 + 9.19 0.000 Intergenic Intergenic 119400 NM_016383 51213 Hs.242183 NM_016383 ENSG00000102021 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding chr7-8043 chr7 21173345 21173555 + 9.19 0.000 Intergenic L2b|LINE|L2 -254633 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr2-12772 chr2 85706811 85707021 + 9.19 0.000 Intergenic Intergenic 12558 NM_006433 10578 Hs.105806 NM_006433 ENSG00000115523 GNLY D2S69E|LAG-2|LAG2|NKG5|TLA519 granulysin protein-coding chr1-13840 chr1 20163485 20163695 + 9.19 0.000 3' UTR (NM_001367969, exon 4 of 4) 3' UTR (NM_001367969, exon 4 of 4) 13849 NM_001367969 391013 Hs.512512 NM_001105572 ENSG00000187980 PLA2G2C - phospholipase A2 group IIC protein-coding chr19-5370 chr19 7993549 7993759 + 9.19 0.000 intron (NM_001419, intron 1 of 5) intron (NM_001419, intron 1 of 5) 11987 NM_001419 1994 Hs.184492 NM_001419 ENSG00000066044 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding chr4-7133 chr4 36950806 36951016 + 9.19 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -50868 NR_134669 100508631 Hs.397553 NR_134669 ENSG00000261761 LINC02616 - long intergenic non-protein coding RNA 2616 ncRNA chr13-3478 chr13 114202760 114202970 + 9.19 0.000 Intergenic L1M4b|LINE|L1 -31980 NM_003903 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chr6-7544 chr6 70514683 70514893 + 9.19 0.000 intron (NM_020819, intron 11 of 20) L1MCa|LINE|L1 -52142 NM_145267 135154 Hs.418495 NM_145267 ENSG00000154079 SDHAF4 C6orf57|Sdh8 succinate dehydrogenase complex assembly factor 4 protein-coding chr3-10748 chr3 156127383 156127593 + 9.19 0.000 intron (NM_172160, intron 1 of 13) intron (NM_172160, intron 1 of 13) 6940 NM_172160 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr17-5721 chr17 57480899 57481109 + 9.19 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) 42593 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr8-1954 chr8 58163582 58163792 + 9.19 0.000 Intergenic Intergenic 108414 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr2-8263 chr2 100450280 100450490 + 9.19 0.000 Intergenic Intergenic -20097 NM_001011717 129521 Hs.567676 NM_001011717 ENSG00000204640 NMS - neuromedin S protein-coding chr10-5715 chr10 100966497 100966707 + 9.19 0.000 Intergenic Intergenic -5927 NM_017893 57715 Hs.591923 NM_017893 ENSG00000095539 SEMA4G - semaphorin 4G protein-coding chr5-7329 chr5 16438104 16438314 + 9.19 0.000 intron (NR_104625, intron 3 of 8) HERV16-int|LTR|ERVL 2893 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA chr13-1117 chr13 23427430 23427640 + 9.19 0.000 non-coding (NR_103450, exon 2 of 2) non-coding (NR_103450, exon 2 of 2) 6167 NM_014363 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr11-1721 chr11 94128921 94129131 + 9.19 0.000 5' UTR (NM_015368, exon 1 of 5) 5' UTR (NM_015368, exon 1 of 5) 185 NM_015368 24145 Hs.591976 NM_015368 ENSG00000110218 PANX1 MRS1|PX1|UNQ2529 pannexin 1 protein-coding chr7-5739 chr7 73628409 73628619 + 9.19 0.000 Intergenic AluJr|SINE|Alu -3992 NM_032951 51085 Hs.647055 NM_032951 ENSG00000009950 MLXIPL CHREBP|MIO|MLX|MONDOB|WBSCR14|WS-bHLH|bHLHd14 MLX interacting protein like protein-coding chr2-6952 chr2 120332564 120332774 + 9.19 0.000 Intergenic Intergenic -13467 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr11-10045 chr11 83491724 83491934 + 9.19 0.000 intron (NM_001142699, intron 21 of 27) L2a|LINE|L2 190596 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr10-3918 chr10 77320980 77321190 + 9.19 0.000 intron (NM_001322838, intron 1 of 29) intron (NM_001322838, intron 1 of 29) 29676 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr8-6976 chr8 107576793 107577003 + 9.19 0.000 Intergenic SATR1|Satellite|Satellite -78980 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr3-9428 chr3 48752189 48752399 + 9.19 0.000 exon (NM_004157, exon 10 of 11) exon (NM_004157, exon 10 of 11) -35016 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr10-5337 chr10 71537569 71537779 + 9.19 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -25754 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr1-8205 chr1 24093770 24093980 + 9.19 0.000 intron (NM_152372, intron 9 of 36) intron (NM_152372, intron 9 of 36) 18260 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr20-1788 chr20 58252216 58252426 + 9.19 0.000 intron (NR_003505, intron 4 of 16) intron (NR_003505, intron 4 of 16) -23668 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr19-2712 chr19 28735094 28735304 + 9.19 0.000 Intergenic L1PA17|LINE|L1 -7505 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr1-10256 chr1 118947977 118948187 + 9.19 0.000 intron (NM_152380, intron 1 of 7) intron (NM_152380, intron 1 of 7) 40261 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr1-9620 chr1 46034684 46034894 + 9.19 0.000 exon (NM_015112, exon 29 of 29) exon (NM_015112, exon 29 of 29) 95884 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr3-10939 chr3 175316835 175317045 + 9.19 0.000 intron (NM_207015, intron 4 of 13) intron (NM_207015, intron 4 of 13) -45844 NR_046713 100874244 Hs.581176 NR_046713 NAALADL2-AS2 - NAALADL2 antisense RNA 2 ncRNA chr7-6263 chr7 135231650 135231860 + 9.19 0.000 promoter-TSS (NM_182489) promoter-TSS (NM_182489) -224 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr17-8550 chr17 79714164 79714374 + 9.19 0.000 Intergenic Intergenic 7003 NR_109783 100652929 Hs.559249 NR_109783 ENSG00000267719 LINC02078 HP09025 long intergenic non-protein coding RNA 2078 ncRNA chr2-7861 chr2 50538366 50538576 + 9.19 0.000 exon (NM_001135659, exon 11 of 24) exon (NM_001135659, exon 11 of 24) 157791 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA chr6-5139 chr6 124039063 124039273 + 9.19 0.000 intron (NM_001040214, intron 1 of 6) intron (NM_001040214, intron 1 of 6) 235303 NM_001040214 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr4-8752 chr4 186201835 186202045 + 9.19 0.000 intron (NM_207352, intron 7 of 10) intron (NM_207352, intron 7 of 10) 10373 NM_207352 285440 Hs.587231 NM_207352 ENSG00000145476 CYP4V2 BCD|CYP4AH1 cytochrome P450 family 4 subfamily V member 2 protein-coding chr6-2890 chr6 11496246 11496456 + 9.19 0.000 Intergenic Intergenic -41398 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr17-6911 chr17 35522511 35522721 + 9.19 0.000 5' UTR (NM_001363830, exon 2 of 5) 5' UTR (NM_001363830, exon 2 of 5) 15245 NM_001363830 100506736 Hs.447559 NM_001145027 ENSG00000205045 SLFN12L - schlafen family member 12 like protein-coding chr3-8366 chr3 82600013 82600223 + 9.19 0.000 Intergenic L1PA16|LINE|L1 613976 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr3-11059 chr3 183906269 183906479 + 9.19 0.000 Intergenic Intergenic 19574 NR_039650 100616127 NR_039650 ENSG00000263932 MIR4448 - microRNA 4448 ncRNA chr13-2451 chr13 49308156 49308366 + 9.19 0.000 TTS (NM_030925) TTS (NM_030925) 60336 NM_030911 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr13-1716 chr13 94362464 94362674 + 9.19 0.000 intron (NM_005708, intron 6 of 8) intron (NM_005708, intron 6 of 8) 117113 NM_001922 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr13-2873 chr13 111016532 111016742 + 9.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR 50610 NR_126378 104355135 Hs.649708 NR_126378 LINC00431 - long intergenic non-protein coding RNA 431 ncRNA chr5-8090 chr5 95916128 95916338 + 9.19 0.000 intron (NM_012081, intron 3 of 11) L2b|LINE|L2 45618 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr6-7015 chr6 22613685 22613895 + 9.19 0.000 Intergenic MIRb|SINE|MIR 44224 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr2-9040 chr2 198793174 198793384 + 9.19 0.000 Intergenic Intergenic -418182 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr11-6845 chr11 96647691 96647901 + 9.19 0.000 Intergenic Intergenic 139371 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr2-13727 chr2 167986979 167987189 + 9.19 0.000 intron (NM_013233, intron 16 of 17) intron (NM_013233, intron 16 of 17) -45940 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr9-8003 chr9 94016237 94016447 + 9.19 0.000 Intergenic L2b|LINE|L2 -14471 NM_001253830 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding chr12-4957 chr12 73028637 73028847 + 9.19 0.000 Intergenic AluSq2|SINE|Alu -130448 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LINC02444 - long intergenic non-protein coding RNA 2444 ncRNA chr2-9144 chr2 210715656 210715866 + 9.19 0.000 Intergenic Intergenic 98190 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr21-236 chr21 42475459 42475669 + 9.19 0.000 intron (NM_080860, intron 8 of 8) AluSx|SINE|Alu 20660 NM_001286506 89765 Hs.661069 NM_080860 ENSG00000160188 RSPH1 CT79|RSP44|RSPH10A|TSA2|TSGA2 radial spoke head component 1 protein-coding chr14-3740 chr14 36551115 36551325 + 9.19 0.000 Intergenic MER58A|DNA|hAT-Charlie -30988 NM_001079668 7080 Hs.94367 NM_003317 ENSG00000136352 NKX2-1 BCH|BHC|NK-2|NKX2.1|NKX2A|NMTC1|T/EBP|TEBP|TITF1|TTF-1|TTF1 NK2 homeobox 1 protein-coding chr1-15222 chr1 111045276 111045486 + 9.19 0.000 Intergenic Intergenic -81437 NM_001006945 55791 Hs.25245 NM_018372 ENSG00000121931 LRIF1 C1orf103|HBiX1|RIF1 ligand dependent nuclear receptor interacting factor 1 protein-coding chr10-4545 chr10 98848899 98849109 + 9.19 0.000 intron (NM_021828, intron 3 of 11) L2c|LINE|L2 75564 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr10-2135 chr10 33509326 33509536 + 9.19 0.000 Intergenic Intergenic -174526 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr3-8031 chr3 194537223 194537433 + 9.19 0.000 Intergenic Intergenic -46940 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr2-10908 chr2 71516223 71516433 + 9.19 0.000 intron (NM_001130985, intron 9 of 54) (GTGT)n|Simple_repeat|Simple_repeat 49629 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr2-5655 chr2 197207199 197207409 + 9.19 0.000 intron (NM_153697, intron 1 of 9) intron (NM_153697, intron 1 of 9) 9313 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr2-8941 chr2 186771414 186771624 + 9.19 0.000 Intergenic L1PBa|LINE|L1 77459 NM_177454 165215 Hs.28872 NM_177454 ENSG00000144369 FAM171B KIAA1946 family with sequence similarity 171 member B protein-coding chr2-10698 chr2 26141917 26142127 + 9.19 0.000 Intergenic L1MC5|LINE|L1 -31066 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr10-7324 chr10 188684 188894 + 9.19 0.000 intron (NM_001370109, intron 2 of 13) intron (NM_001370109, intron 2 of 13) 8795 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr5-5957 chr5 108788400 108788610 + 9.19 0.000 intron (NM_001308038, intron 3 of 7) MER52A|LTR|ERV1 39557 NR_146155 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr17-8328 chr17 72951392 72951602 + 9.19 0.000 intron (NM_001352692, intron 4 of 9) L2a|LINE|L2 141191 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chrX-4194 chrX 35113613 35113823 + 9.19 0.000 Intergenic Intergenic 170922 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr1-10580 chr1 175404038 175404248 + 9.19 0.000 intron (NM_003285, intron 3 of 22) intron (NM_003285, intron 3 of 22) -211156 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr12-4785 chr12 53677882 53678092 + 9.19 0.000 Intergenic Intergenic -1657 NM_001002031 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr2-14679 chr2 237254282 237254492 + 9.19 0.000 Intergenic MER119|DNA|hAT-Charlie 159777 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr18-1604 chr18 43664555 43664765 + 9.19 0.000 Intergenic L2a|LINE|L2 -387170 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr2-11083 chr2 123828736 123828946 + 9.19 0.000 Intergenic Intergenic 196333 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA chr4-4854 chr4 111927598 111927808 + 9.19 0.000 Intergenic L1PA16|LINE|L1 -217751 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr1-10671 chr1 184928027 184928237 + 9.19 0.000 intron (NM_052966, intron 1 of 13) L1MA3|LINE|L1 46376 NM_052966 116496 Hs.518662 NM_052966 ENSG00000135842 NIBAN1 C1orf24|FAM129A|GIG39|NIBAN niban apoptosis regulator 1 protein-coding chr2-6541 chr2 211187585 211187795 + 9.19 0.000 Intergenic L2|LINE|L2 570119 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr10-3765 chr10 123741265 123741475 + 9.19 0.000 Intergenic Intergenic 75015 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr3-6117 chr3 53763055 53763265 + 9.19 0.000 intron (NM_001128839, intron 30 of 45) intron (NM_001128839, intron 30 of 45) 83259 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr19-6274 chr19 7823951 7824161 + 9.19 0.000 Intergenic L1MB4|LINE|L1 -6162 NM_001159944 115704 Hs.26870 NM_145245 ENSG00000142459 EVI5L - ecotropic viral integration site 5 like protein-coding chr7-3980 chr7 134925671 134925881 + 9.19 0.000 intron (NM_033139, intron 1 of 12) THE1D|LTR|ERVL-MaLR 34318 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr14-1412 chr14 64833428 64833638 + 9.19 0.000 intron (NM_001355436, intron 1 of 35) AluSx|SINE|Alu -10153 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr6-4875 chr6 89614322 89614532 + 9.19 0.000 intron (NM_001242809, intron 7 of 15) AluSz|SINE|Alu 24070 NR_028493 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chrX-2719 chrX 122666805 122667015 + 9.19 0.000 Intergenic Intergenic -517333 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr6-7838 chr6 104316470 104316680 + 9.19 0.000 Intergenic LTR33A_|LTR|ERVL 542971 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr12-3917 chr12 129961423 129961633 + 9.19 0.000 Intergenic Intergenic -57503 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr4-3094 chr4 153114887 153115097 + 9.19 0.000 Intergenic Intergenic -37342 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr3-6194 chr3 61494785 61494995 + 9.19 0.000 Intergenic L2c|LINE|L2 -66681 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr2-11063 chr2 117772196 117772406 + 9.19 0.000 Intergenic Intergenic -42390 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr10-6376 chr10 832809 833019 + 9.19 0.000 intron (NM_001351277, intron 8 of 17) L1MEc|LINE|L1 98791 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr4-7672 chr4 87055557 87055767 + 9.19 0.000 intron (NM_005935, intron 3 of 19) intron (NM_005935, intron 3 of 19) 48661 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr6-8426 chr6 151444165 151444375 + 9.19 0.000 intron (NM_001271937, intron 1 of 10) intron (NM_001271937, intron 1 of 10) 7856 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr2-2372 chr2 238122495 238122705 + 9.19 0.000 intron (NM_194312, intron 5 of 8) intron (NM_194312, intron 5 of 8) -4790 NM_001308370 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr10-7127 chr10 100101427 100101637 + 9.19 0.000 Intergenic L2c|LINE|L2 -19663 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chr9-3360 chr9 116639182 116639392 + 9.19 0.000 intron (NM_014010, intron 16 of 21) intron (NM_014010, intron 16 of 21) 47928 NM_198186 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr13-3318 chr13 54690004 54690214 + 9.19 0.000 Intergenic LOR1-int|LTR|ERV1 -378061 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr12-1916 chr12 90653082 90653292 + 9.19 0.000 Intergenic L1MA8|LINE|L1 -264836 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr12-4118 chr12 64697977 64698187 + 9.19 0.000 TTS (NM_178169) TTS (NM_178169) 61324 NM_002076 2799 Hs.334534 NM_002076 ENSG00000135677 GNS G6S glucosamine (N-acetyl)-6-sulfatase protein-coding chr3-4682 chr3 48059156 48059366 + 9.19 0.000 intron (NM_002375, intron 1 of 18) AluSx3|SINE|Alu 29587 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr8-4781 chr8 144009954 144010164 + 9.19 0.000 Intergenic Intergenic -2221 NM_198572 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr13-1626 chr13 51164972 51165182 + 9.19 0.000 intron (NR_102431, intron 1 of 4) LTR33|LTR|ERVL 7145 NR_102432 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr6-5595 chr6 37029406 37029616 + 9.19 0.000 TTS (NM_173558) TTS (NM_173558) 23856 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr5-5499 chr5 141791563 141791773 + 9.19 0.000 Intergenic L2a|LINE|L2 74534 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr22-1630 chr22 33302002 33302212 + 9.19 0.000 intron (NM_133642, intron 12 of 14) intron (NM_133642, intron 12 of 14) 134562 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr3-10368 chr3 128499001 128499211 + 9.19 0.000 intron (NR_125398, intron 2 of 2) intron (NR_125398, intron 2 of 2) -5919 NM_032638 2624 Hs.367725 NM_032638 ENSG00000179348 GATA2 DCML|IMD21|MONOMAC|NFE1B GATA binding protein 2 protein-coding chr19-2814 chr19 49232882 49233092 + 9.19 0.000 Intergenic Intergenic 75195 NM_001195227 54795 Hs.467101 NM_017636 ENSG00000130529 TRPM4 LTrpC4|PFHB1B|TRPM4B|hTRPM4 transient receptor potential cation channel subfamily M member 4 protein-coding chr6-3627 chr6 116783866 116784076 + 9.19 0.000 Intergenic Intergenic -18252 NM_001085480 221303 Hs.126712 NM_001085480 ENSG00000183807 FAM162B C6orf189|bA86F4.2 family with sequence similarity 162 member B protein-coding chr18-1549 chr18 23541584 23541794 + 9.19 0.000 intron (NM_000271, intron 14 of 24) intron (NM_000271, intron 14 of 24) 38178 NM_013326 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr1-5801 chr1 185929807 185930017 + 9.19 0.000 intron (NM_031935, intron 10 of 106) intron (NM_031935, intron 10 of 106) 195521 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr9-2451 chr9 14627686 14627896 + 9.19 0.000 intron (NR_148717, intron 9 of 11) intron (NR_148717, intron 9 of 11) 65641 NM_001354130 340481 Hs.649522 NM_178566 ENSG00000175893 ZDHHC21 DHHC-21|DHHC21|DNZ1|HSPC097 zinc finger DHHC-type containing 21 protein-coding chr1-10325 chr1 152007577 152007787 + 9.19 0.000 Intergenic Intergenic -10596 NR_103561 441908 Hs.656557 NR_103561 NBPF18P - NBPF member 18, pseudogene pseudo chr4-4567 chr4 74672512 74672722 + 9.19 0.000 Intergenic L2c|LINE|L2 121906 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr9-6162 chr9 75637411 75637621 + 9.19 0.000 Intergenic Intergenic -253128 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr11-5645 chr11 122634587 122634797 + 9.19 0.000 Intergenic Intergenic -21030 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chrX-2923 chrX 152907768 152907978 + 9.19 0.000 Intergenic Intergenic -6569 NM_001178110 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr22-3136 chr22 22355024 22355234 + 9.19 0.000 Intergenic Intergenic 57031 NR_027293 96610 Hs.449601 NM_080926 BMS1P20 IGL|IGLV|IGLV1 BMS1 pseudogene 20 pseudo chr1-10005 chr1 85412790 85413000 + 9.19 0.000 intron (NM_001134445, intron 2 of 6) AluJo|SINE|Alu -8389 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr2-6808 chr2 54888692 54888902 + 9.19 0.000 intron (NM_001039753, intron 16 of 40) L1MC1|LINE|L1 121475 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr19-4264 chr19 58079843 58080053 + 9.19 0.000 Intergenic AluJr|SINE|Alu 18283 NM_001145544 65982 Hs.235390 NM_023926 ENSG00000121413 ZSCAN18 ZNF447 zinc finger and SCAN domain containing 18 protein-coding chr5-3358 chr5 137847740 137847950 + 9.19 0.000 Intergenic Intergenic -20011 NM_006790 9499 Hs.84665 NM_006790 ENSG00000120729 MYOT LGMD1|LGMD1A|MFM3|TTID|TTOD myotilin protein-coding chr1-13226 chr1 215002873 215003083 + 9.19 0.000 Intergenic Intergenic -2564 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr2-4266 chr2 227510327 227510537 + 9.19 0.000 intron (NM_004504, intron 2 of 12) intron (NM_004504, intron 2 of 12) 38260 NM_004504 3267 Hs.352962 NM_004504 ENSG00000173744 AGFG1 HRB|RAB|RIP ArfGAP with FG repeats 1 protein-coding chr5-9210 chr5 180687008 180687218 + 9.19 0.000 TTS (NR_146728) TTS (NR_146728) 3017 NR_146728 105377765 Hs.131536 NR_146728 LINC02222 - long intergenic non-protein coding RNA 2222 ncRNA chr19-2605 chr19 2255398 2255608 + 9.19 0.000 intron (NM_144616, intron 1 of 6) intron (NM_144616, intron 1 of 6) 914 NM_144616 126306 Hs.330742 NM_144616 ENSG00000167476 JSRP1 JP-45|JP45 junctional sarcoplasmic reticulum protein 1 protein-coding chr5-8862 chr5 153417062 153417272 + 9.19 0.000 Intergenic MIR|SINE|MIR -73357 NM_001258020 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr21-1593 chr21 16022073 16022283 + 9.19 0.000 Intergenic Intergenic -48310 NR_136541 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr10-6706 chr10 124451366 124451576 + 9.19 0.000 Intergenic Intergenic -1436 NM_001146340 390010 Hs.290255 NM_001146340 ENSG00000229544 NKX1-2 C10orf121|NKX-1.1|bB238F13.2 NK1 homeobox 2 protein-coding chr3-8346 chr3 75983486 75983696 + 9.19 0.000 Intergenic Intergenic -198042 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr3-4812 chr3 130496396 130496606 + 9.19 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -63833 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr6-8088 chr6 125512887 125513097 + 9.19 0.000 Intergenic Zaphod3|DNA|hAT-Tip100 -161361 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr17-5988 chr17 77576839 77577049 + 9.19 0.000 Intergenic AluSx|SINE|Alu 30003 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr4-6139 chr4 27908896 27909106 + 9.19 0.000 Intergenic Intergenic 691522 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr20-3183 chr20 45766243 45766453 + 9.19 0.000 Intergenic Intergenic 25535 NM_080614 140686 Hs.419126 NM_080614 ENSG00000124116 WFDC3 WAP14|dJ447F3.3 WAP four-disulfide core domain 3 protein-coding chr16-4497 chr16 57669702 57669912 + 9.19 0.000 intron (NM_001308360, intron 1 of 10) intron (NM_001308360, intron 1 of 10) 1501 NM_001308360 222487 Hs.383403 NM_170776 ENSG00000182885 ADGRG3 GPR97|PB99|PGR26 adhesion G protein-coupled receptor G3 protein-coding chr8-4744 chr8 142506961 142507171 + 9.19 0.000 intron (NM_001702, intron 17 of 30) MIRb|SINE|MIR 57417 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr15-4096 chr15 74941169 74941379 + 9.19 0.000 Intergenic MamRTE1|LINE|RTE-BovB -3201 NM_004255 9377 Hs.401903 NM_004255 ENSG00000178741 COX5A COX|COX-VA|VA cytochrome c oxidase subunit 5A protein-coding chr7-3688 chr7 50130656 50130866 + 9.19 0.000 intron (NM_001161834, intron 3 of 8) L2a|LINE|L2 34675 NM_001161834 100130988 Hs.99248 NM_001161834 ENSG00000164500 SPATA48 C7orf72 spermatogenesis associated 48 protein-coding chr6-4467 chr6 35764217 35764427 + 9.19 0.000 Intergenic LTR9B|LTR|ERV1 -12272 NR_104469 389383 Hs.259563 NM_207409 ENSG00000196748 CLPSL2 AAAL3045|C6orf126|UNQ3045|dJ510O8.5 colipase like 2 protein-coding chr1-7836 chr1 70219677 70219887 + 9.19 0.000 intron (NM_001190987, intron 1 of 12) intron (NM_001190987, intron 1 of 12) -1598 NM_001350616 9295 Hs.479693 NM_004768 ENSG00000116754 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine and arginine rich splicing factor 11 protein-coding chr9-7048 chr9 123384353 123384563 + 9.19 0.000 intron (NM_020946, intron 20 of 21) MIRb|SINE|MIR 15679 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr1-9366 chr1 29820333 29820543 + 9.19 0.000 Intergenic L1ME1|LINE|L1 217174 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr5-4983 chr5 80377050 80377260 + 9.19 0.000 Intergenic Intergenic -25189 NR_003665 441089 Hs.568291 NR_003665 CRSP8P - mediator complex subunit 27 pseudogene pseudo chr12-2972 chr12 110887748 110887958 + 9.19 0.000 intron (NM_152591, intron 8 of 11) AluSc|SINE|Alu 32747 NM_000432 4633 Hs.75535 NM_000432 ENSG00000111245 MYL2 CMH10|MLC-2s/v|MLC2 myosin light chain 2 protein-coding chr7-6669 chr7 143367927 143368137 + 9.19 0.000 intron (NM_001371250, intron 1 of 6) intron (NM_001371250, intron 1 of 6) -5319 NM_001031690 9715 Hs.648908 NM_014690 ENSG00000159784 FAM131B - family with sequence similarity 131 member B protein-coding chr20-1645 chr20 21428175 21428385 + 9.19 0.000 Intergenic L1MCb|LINE|L1 -30754 NM_033176 644524 NM_033176 ENSG00000125816 NKX2-4 NKX2.4|NKX2D NK2 homeobox 4 protein-coding chr7-3080 chr7 1647401 1647611 + 9.19 0.000 Intergenic Intergenic 33036 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr7-3806 chr7 93882939 93883149 + 9.19 0.000 Intergenic Intergenic 7709 NM_001271004 7980 Hs.438231 NM_006528 ENSG00000105825 TFPI2 PP5|REF1|TFPI-2 tissue factor pathway inhibitor 2 protein-coding chr5-5656 chr5 158125654 158125864 + 9.19 0.000 Intergenic Intergenic -266614 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr5-2769 chr5 166378016 166378226 + 9.19 0.000 Intergenic LTR9|LTR|ERV1 548249 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr14-4008 chr14 40043932 40044142 + 9.19 0.000 Intergenic L1MC3|LINE|L1 -611537 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding GL000251.2-1 GL000251.2 2837538 2837748 + 9.19 0.000 NA NA NA NA chr16-6764 chr16 75835222 75835432 + 9.19 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -108837 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr1-8920 chr1 7024013 7024223 + 9.19 0.000 intron (NM_001349608, intron 2 of 21) L1MEd|LINE|L1 238664 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr2-8749 chr2 161562177 161562387 + 9.19 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -54380 NR_077058 285116 Hs.470435 NR_077058 AHCTF1P1 AHCTF1P|ELYS-like AT-hook containing transcription factor 1 pseudogene 1 pseudo chr11-9236 chr11 41681016 41681226 + 9.19 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -33447 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA chr6-6989 chr6 20036087 20036297 + 9.19 0.000 Intergenic Intergenic 176277 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr5-2685 chr5 56451193 56451403 + 9.19 0.000 Intergenic Intergenic 30471 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr5-4657 chr5 36505029 36505239 + 9.19 0.000 Intergenic Intergenic -101221 NM_001289939 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr5-3083 chr5 37875334 37875544 + 9.19 0.000 non-coding (NR_145476, exon 4 of 4) non-coding (NR_145476, exon 4 of 4) 35001 NR_103441 100861519 Hs.536820 NM_001278094 GDNF-AS1 GDNFOS GDNF antisense RNA 1 ncRNA chr22-2707 chr22 37877453 37877663 + 9.19 0.000 intron (NM_001242923, intron 8 of 10) intron (NM_001242923, intron 8 of 10) 28139 NM_016091 51386 Hs.446852 NM_016091 ENSG00000100129 EIF3L EIF3EIP|EIF3S11|EIF3S6IP|HSPC021|HSPC025|MSTP005 eukaryotic translation initiation factor 3 subunit L protein-coding chr12-5417 chr12 121969359 121969569 + 9.19 0.000 intron (NM_144668, intron 17 of 21) intron (NM_144668, intron 17 of 21) 50872 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr12-5124 chr12 98307246 98307456 + 9.19 0.000 Intergenic Intergenic 149794 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr1-5214 chr1 183808023 183808233 + 9.19 0.000 intron (NM_001297671, intron 2 of 17) intron (NM_001297671, intron 2 of 17) 3008 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr1-10168 chr1 110123115 110123325 + 9.19 0.000 Intergenic Intergenic 10777 NM_203412 164153 Hs.374027 NM_203412 ENSG00000186150 UBL4B - ubiquitin like 4B protein-coding chr19-4139 chr19 28063215 28063425 + 9.19 0.000 Intergenic Intergenic -269380 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr2-8782 chr2 166016989 166017199 + 9.19 0.000 intron (NR_110598, intron 2 of 3) Charlie25|DNA|hAT-Charlie 59676 NR_110598 102724058 Hs.570269 NR_110598 ENSG00000236107 LOC102724058 - uncharacterized LOC102724058 ncRNA chr12-5837 chr12 41108067 41108277 + 9.19 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -80148 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr2-6078 chr2 160583185 160583395 + 9.19 0.000 Intergenic Intergenic -89483 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr5-5063 chr5 93365678 93365888 + 9.19 0.000 Intergenic MIR|SINE|MIR 205560 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr6-6385 chr6 75883050 75883260 + 9.19 0.000 intron (NM_001300899, intron 23 of 32) Ricksha_0|DNA|MULE-MuDR 133916 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr8-3014 chr8 121318347 121318557 + 9.19 0.000 Intergenic Intergenic -320894 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr13-1700 chr13 88017080 88017290 + 9.19 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -125682 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr7-7442 chr7 81882749 81882959 + 9.19 0.000 Intergenic Intergenic -112807 NM_001010933 3082 Hs.396530 NM_000601 ENSG00000019991 HGF DFNB39|F-TCF|HGFB|HPTA|SF hepatocyte growth factor protein-coding chr1-10651 chr1 182753992 182754202 + 9.19 0.000 Intergenic Intergenic -35352 NM_001200052 80896 Hs.496969 NM_030769 ENSG00000135838 NPL C112|C1orf13|NAL|NPL1 N-acetylneuraminate pyruvate lyase protein-coding chr12-5352 chr12 117192099 117192309 + 9.19 0.000 Intergenic L2c|LINE|L2 -1734 NM_015002 23014 Hs.740376 NM_015002 ENSG00000135108 FBXO21 FBX21 F-box protein 21 protein-coding chr8-3653 chr8 6462005 6462215 + 9.19 0.000 intron (NM_001363980, intron 9 of 10) intron (NM_001363980, intron 9 of 10) 54957 NM_001322045 79648 Hs.593807 NM_024596 ENSG00000147316 MCPH1 BRIT1|MCT microcephalin 1 protein-coding chr14-3382 chr14 94411679 94411889 + 9.19 0.000 Intergenic LTR41|LTR|ERVL -21092 NM_001127701 5265 Hs.525557 NM_000295 ENSG00000197249 SERPINA1 A1A|A1AT|AAT|PI|PI1|PRO2275|alpha1AT|nNIF serpin family A member 1 protein-coding chr22-2080 chr22 16802502 16802712 + 9.19 0.000 intron (NM_001318251, intron 2 of 3) AluSc|SINE|Alu 19092 NM_001318251 150165 Hs.356069 NM_175878 ENSG00000172967 XKR3 XRG3|XTES XK related 3 protein-coding chr8-6864 chr8 100359656 100359866 + 9.19 0.000 Intergenic Intergenic -23002 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr10-4739 chr10 1097394 1097604 + 9.19 0.000 intron (NM_014023, intron 9 of 13) MLT1A-int|LTR|ERVL-MaLR -40795 NM_001317955 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr7-4143 chr7 76272695 76272905 + 9.19 0.000 intron (NM_001110199, intron 11 of 14) intron (NM_001110199, intron 11 of 14) -29873 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr2-7696 chr2 31407012 31407222 + 9.19 0.000 intron (NM_000379, intron 1 of 35) LTR78|LTR|ERV1 7625 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr4-2605 chr4 133513831 133514041 + 9.19 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 364642 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr2-14406 chr2 221086510 221086720 + 9.19 0.000 Intergenic THE1D|LTR|ERVL-MaLR 485689 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr2-5330 chr2 84631222 84631432 + 9.19 0.000 intron (NM_001370, intron 29 of 76) MER90|LTR|ERV1 114872 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chrX-5209 chrX 135005432 135005642 + 9.19 0.000 Intergenic Intergenic 14546 NM_001163438 644538 Hs.42239 NM_001163438 ENSG00000184785 SMIM10 CXorf69 small integral membrane protein 10 protein-coding chr19-3579 chr19 47767568 47767778 + 9.19 0.000 intron (NR_132382, intron 1 of 2) intron (NR_132382, intron 1 of 2) 1167 NR_132382 106144593 Hs.421907 NR_132382 ENSG00000269656 NOP53-AS1 GLTSCR2-AS1 NOP53 antisense RNA 1 ncRNA chrX-1956 chrX 8583273 8583483 + 9.19 0.000 intron (NM_000216, intron 6 of 13) L1MB7|LINE|L1 118548 NM_001001888 425054 Hs.279737 NM_001001888 ENSG00000205642 VCX3B VCX-C|VCXC variable charge X-linked 3B protein-coding chr2-4518 chr2 31935463 31935673 + 9.19 0.000 intron (NR_126032, intron 2 of 6) intron (NR_126032, intron 2 of 6) 75096 NM_001137602 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding chr11-6396 chr11 65270140 65270350 + 9.19 0.000 intron (NM_002689, intron 4 of 17) AluJb|SINE|Alu 8283 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr13-1657 chr13 71585810 71586020 + 9.19 0.000 intron (NM_001366712, intron 3 of 11) intron (NM_001366712, intron 3 of 11) 281277 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr21-997 chr21 14628151 14628361 + 9.19 0.000 intron (NM_001256579, intron 1 of 6) L1MA5A|LINE|L1 14851 NM_001256579 388813 Hs.334177 NM_001256579 LOC388813 - uncharacterized protein ENSP00000383407-like protein-coding chr3-2919 chr3 52385275 52385485 + 9.19 0.000 exon (NM_015512, exon 54 of 78) exon (NM_015512, exon 54 of 78) 24628 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr7-4779 chr7 79283165 79283375 + 9.19 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) -169687 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr3-3768 chr3 11045739 11045949 + 9.19 0.000 Intergenic Intergenic -26620 NR_046647 100874090 Hs.628542 NR_046647 ENSG00000232287 SLC6A1-AS1 - SLC6A1 antisense RNA 1 ncRNA chr15-5174 chr15 92997981 92998191 + 9.19 0.000 intron (NM_001271, intron 30 of 38) intron (NM_001271, intron 30 of 38) 75070 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr8-2467 chr8 130677980 130678190 + 9.19 0.000 Intergenic L3|LINE|CR1 -234411 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr5-7701 chr5 57027156 57027366 + 9.19 0.000 Intergenic Tigger9b|DNA|TcMar-Tigger -75131 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr10-7416 chr10 5048512 5048722 + 9.19 0.000 promoter-TSS (NM_001253908) promoter-TSS (NM_001253908) -149 NM_001253908 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding chr3-4801 chr3 126548589 126548799 + 9.19 0.000 TTS (NM_152533) TTS (NM_152533) 10238 NR_130715 152065 Hs.178210 NM_152533 ENSG00000180697 C3orf22 - chromosome 3 open reading frame 22 protein-coding chr3-3468 chr3 171187775 171187985 + 9.19 0.000 intron (NM_001161563, intron 7 of 31) intron (NM_001161563, intron 7 of 31) -81121 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr10-8366 chr10 80564711 80564921 + 9.19 0.000 intron (NM_001145719, intron 1 of 6) L2|LINE|L2 23997 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr17-2572 chr17 63957989 63958199 + 9.19 0.000 intron (NM_000334, intron 12 of 23) AluJb|SINE|Alu 14824 NM_000334 6329 Hs.46038 NM_000334 ENSG00000007314 SCN4A CMS16|HOKPP2|HYKPP|HYPP|NAC1A|Na(V)1.4|Nav1.4|SkM1 sodium voltage-gated channel alpha subunit 4 protein-coding chr13-3758 chr13 42996711 42996921 + 9.19 0.000 Intergenic Intergenic -4575 NM_001330543 94240 Hs.546467 NM_033255 ENSG00000133106 EPSTI1 BRESI1 epithelial stromal interaction 1 protein-coding chr6-3911 chr6 71789143 71789353 + 9.19 0.000 Intergenic HERV9N-int|LTR|ERV1 -97455 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr2-7955 chr2 62550633 62550843 + 9.19 0.000 Intergenic L1MA7|LINE|L1 -44543 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr3-5391 chr3 156213987 156214197 + 9.19 0.000 intron (NM_003471, intron 1 of 13) MER21C|LTR|ERVL 13791 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr20-3454 chr20 51043909 51044119 + 9.19 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -20907 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr16-3356 chr16 46632734 46632944 + 9.19 0.000 Intergenic MER52C|LTR|ERV1 -11460 NM_001324319 79801 Hs.123253 NM_024745 ENSG00000171241 SHCBP1 PAL SHC binding and spindle associated 1 protein-coding chr6-4904 chr6 94172879 94173089 + 9.19 0.000 Intergenic LTR12D|LTR|ERV1 454681 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr3-4509 chr3 98174713 98174923 + 9.19 0.000 Intergenic L1PA4|LINE|L1 6118 NM_001005515 403274 Hs.554713 NM_001005515 ENSG00000233412 OR5H15 - olfactory receptor family 5 subfamily H member 15 protein-coding chr14-4887 chr14 72072582 72072792 + 9.19 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 139160 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr3-9093 chr3 28077631 28077841 + 9.19 0.000 Intergenic Intergenic -163883 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr17-5850 chr17 67359088 67359298 + 9.19 0.000 intron (NM_002816, intron 1 of 10) AluJr|SINE|Alu 7384 NM_174871 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr5-4616 chr5 32348077 32348287 + 9.19 0.000 Intergenic MER41B|LTR|ERV1 -35243 NM_001294344 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr2-7539 chr2 22620050 22620260 + 9.19 0.000 Intergenic Intergenic 83676 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr12-2837 chr12 127302342 127302552 + 9.19 0.000 Intergenic Intergenic -18164 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr10-2537 chr10 58544255 58544465 + 9.19 0.000 intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 31488 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr10-5258 chr10 67779827 67780037 + 9.19 0.000 Intergenic Intergenic 58247 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr10-3485 chr10 67730433 67730643 + 9.19 0.000 Intergenic HAL1|LINE|L1 -34343 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chr6-5491 chr6 163030317 163030527 + 9.19 0.000 intron (NM_001080379, intron 2 of 4) MER63A|DNA|hAT-Blackjack 23739 NR_110872 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr7-5268 chr7 21276303 21276513 + 9.19 0.000 Intergenic MER21C|LTR|ERVL -151675 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr8-4637 chr8 133631089 133631299 + 9.19 0.000 Intergenic Intergenic 52872 NR_134462 105375773 Hs.445172 NR_134462 LOC105375773 - uncharacterized LOC105375773 ncRNA chr5-5343 chr5 130937347 130937557 + 9.19 0.000 Intergenic MER1B|DNA|hAT-Charlie 227804 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chrX-4642 chrX 78964631 78964841 + 9.19 0.000 Intergenic MSTB|LTR|ERVL-MaLR 19345 NM_001324221 27334 Hs.296433 NM_014499 ENSG00000078589 P2RY10 LYPSR2|P2Y10 P2Y receptor family member 10 protein-coding chr22-3571 chr22 19355491 19355701 + 9.19 0.000 intron (NM_003325, intron 21 of 24) intron (NM_003325, intron 21 of 24) -63877 NM_007098 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr10-2292 chr10 19654562 19654772 + 9.19 0.000 intron (NM_001142308, intron 36 of 39) intron (NM_001142308, intron 36 of 39) 73883 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr7-5037 chr7 1331582 1331792 + 9.19 0.000 Intergenic Intergenic 98815 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr10-6515 chr10 63908369 63908579 + 9.19 0.000 Intergenic Intergenic -386584 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr18-1106 chr18 64691336 64691546 + 9.19 0.000 Intergenic L2a|LINE|L2 -431386 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr10-3926 chr10 84308798 84309008 + 9.19 0.000 Intergenic Intergenic -19686 NM_001284241 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr3-3286 chr3 127215087 127215297 + 9.19 0.000 Intergenic L1MDa|LINE|L1 22061 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr21-1791 chr21 38321656 38321866 + 9.19 0.000 Intergenic MER121|DNA|hAT? 24315 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr15-3326 chr15 79761875 79762085 + 9.19 0.000 Intergenic MER11C|LTR|ERVK 135017 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr9-5628 chr9 119629049 119629259 + 9.19 0.000 Intergenic L1MA9|LINE|L1 -259719 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr14-2957 chr14 49809065 49809275 + 9.19 0.000 intron (NM_001301732, intron 17 of 31) L1MC1|LINE|L1 41017 NM_014315 23588 Hs.509264 NM_014315 ENSG00000165516 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding chr8-6923 chr8 102773799 102774009 + 9.19 0.000 Intergenic Intergenic -32918 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr12-4530 chr12 25386101 25386311 + 9.19 0.000 Intergenic Intergenic -135277 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr10-8996 chr10 121094517 121094727 + 9.19 0.000 Intergenic L1PA8|LINE|L1 243260 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chrX-4712 chrX 87739832 87740042 + 9.19 0.000 Intergenic L1ME4a|LINE|L1 222135 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr8-3650 chr8 6040962 6041172 + 9.19 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 365481 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr6-7705 chr6 87423625 87423835 + 9.19 0.000 intron (NM_001031743, intron 7 of 12) intron (NM_001031743, intron 7 of 12) 15758 NM_001031743 154313 Hs.82921 NM_178823 ENSG00000272514 CFAP206 C6orf165|dJ382I10.1 cilia and flagella associated protein 206 protein-coding chr12-5537 chr12 132507608 132507818 + 9.19 0.000 intron (NM_001142641, intron 1 of 16) intron (NM_001142641, intron 1 of 16) 17562 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr9-3485 chr9 14895820 14896030 + 9.19 0.000 intron (NM_001370065, intron 1 of 7) MER41-int|LTR|ERV1 14503 NM_001370063 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr11-2653 chr11 60952496 60952706 + 9.19 0.000 promoter-TSS (NR_027391) promoter-TSS (NR_027391) -425 NM_016582 51296 Hs.237856 NM_016582 ENSG00000110446 SLC15A3 OCTP|PHT2|PTR3 solute carrier family 15 member 3 protein-coding chr1-4249 chr1 224205454 224205664 + 9.19 0.000 Intergenic Intergenic 7720 NR_110669 101927143 Hs.638720 NR_110669 ENSG00000232628 LOC101927143 - uncharacterized LOC101927143 ncRNA chr2-5702 chr2 211181707 211181917 + 9.19 0.000 Intergenic Intergenic 564241 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr7-4896 chr7 123712799 123713009 + 9.19 0.000 intron (NM_003941, intron 1 of 10) intron (NM_003941, intron 1 of 10) 36099 NM_003941 8976 Hs.143728 NM_003941 ENSG00000106299 WASL N-WASP|NWASP|WASPB WASP like actin nucleation promoting factor protein-coding chr8-4680 chr8 139106160 139106370 + 9.19 0.000 Intergenic Intergenic -192224 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr4-6521 chr4 166622675 166622885 + 9.19 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 611646 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr4-3794 chr4 107058935 107059145 + 9.19 0.000 Intergenic Intergenic -22727 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr19-5066 chr19 50554815 50555025 + 9.19 0.000 intron (NM_001080457, intron 1 of 2) intron (NM_001080457, intron 1 of 2) -3878 NM_001348568 94030 Hs.120873 NM_001080457 ENSG00000131409 LRRC4B HSM|LRIG4|NGL-3 leucine rich repeat containing 4B protein-coding chr13-3420 chr13 99426517 99426727 + 9.19 0.000 Intergenic Intergenic 70491 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr4-3490 chr4 136187400 136187610 + 9.19 0.000 Intergenic L1MA3|LINE|L1 -273825 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr10-4982 chr10 30704316 30704526 + 9.19 0.000 non-coding (NR_036438, exon 7 of 10) non-coding (NR_036438, exon 7 of 10) 12147 NR_036438 645954 Hs.408581 NR_036438 SVIL2P SVILP1 supervillin family member 2, pseudogene pseudo chr1-5375 chr1 247234344 247234554 + 9.19 0.000 Intergenic L1MA4A|LINE|L1 -21623 NR_160309 317705 Hs.553686 NM_173858 ENSG00000197617 VN1R5 V1RL5 vomeronasal 1 receptor 5 (gene/pseudogene) protein-coding chr6-3910 chr6 71570305 71570515 + 9.19 0.000 Intergenic Intergenic 149383 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr8-890 chr8 38856207 38856417 + 9.19 0.000 Intergenic Intergenic -45034 NM_021623 59339 Hs.369123 NM_021623 ENSG00000169499 PLEKHA2 TAPP2 pleckstrin homology domain containing A2 protein-coding chrX-2787 chrX 132442742 132442952 + 9.19 0.000 intron (NM_001170704, intron 1 of 8) intron (NM_001170704, intron 1 of 8) -3157 NM_133486 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr11-6149 chr11 42663195 42663405 + 9.19 0.000 Intergenic MER45A|DNA|hAT-Tip100 -409610 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr10-3569 chr10 80163689 80163899 + 9.19 0.000 intron (NM_145869, intron 10 of 16) intron (NM_145869, intron 10 of 16) 31064 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr12-6008 chr12 104459809 104460019 + 9.19 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) 2966 NM_001173982 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr3-3475 chr3 184387584 184387794 + 9.19 0.000 intron (NM_001304472, intron 19 of 22) MIRb|SINE|MIR 7379 NM_001304474 8646 Hs.166186 NM_003741 ENSG00000090539 CHRD - chordin protein-coding chr7-8704 chr7 74389124 74389334 + 9.19 0.000 exon (NM_003388, exon 13 of 17) exon (NM_003388, exon 13 of 17) -64677 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr16-6348 chr16 50433471 50433681 + 9.19 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -38443 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA chr17-5486 chr17 41609961 41610171 + 9.19 0.000 intron (NM_005557, intron 7 of 7) intron (NM_005557, intron 7 of 7) 2701 NM_005557 3868 Hs.655160 NM_005557 ENSG00000186832 KRT16 CK16|FNEPPK|K16|K1CP|KRT16A|NEPPK|PC1 keratin 16 protein-coding chr12-7585 chr12 76687789 76687999 + 9.19 0.000 Intergenic Intergenic -76180 NM_015336 23390 Hs.4014 NM_015336 ENSG00000186908 ZDHHC17 DHHC-17|HIP14|HIP3|HSPC294|HYPH zinc finger DHHC-type containing 17 protein-coding chr16-5895 chr16 2279775 2279985 + 9.19 0.000 intron (NM_001089, intron 28 of 32) AluSz6|SINE|Alu 5260 NR_039868 100616241 NR_039868 ENSG00000264004 MIR4717 - microRNA 4717 ncRNA chr19-2921 chr19 1978865 1979075 + 9.19 0.000 exon (NM_001319, exon 6 of 12) exon (NM_001319, exon 6 of 12) -24421 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr15-3189 chr15 70437949 70438159 + 9.19 0.000 Intergenic Intergenic 67874 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr3-6695 chr3 132322717 132322927 + 9.19 0.000 intron (NM_001292037, intron 1 of 8) MSTC|LTR|ERVL-MaLR 5415 NM_001134194 55 Hs.433060 NM_001099 ENSG00000014257 ACPP 5'-NT|ACP-3|ACP3 acid phosphatase, prostate protein-coding chr4-2659 chr4 740874 741084 + 9.19 0.000 intron (NM_001317836, intron 7 of 11) Cheshire|DNA|hAT-Charlie 35147 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr10-7750 chr10 32932773 32932983 + 9.19 0.000 intron (NM_002211, intron 2 of 15) L1MA2|LINE|L1 2680 NM_033668 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr22-2058 chr22 45939902 45940112 + 9.19 0.000 intron (NM_058238, intron 2 of 3) L1MB7|LINE|L1 37155 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr3-6964 chr3 164382762 164382972 + 9.19 0.000 Intergenic Intergenic -211311 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr13-793 chr13 98022239 98022449 + 9.19 0.000 3' UTR (NM_002271, exon 29 of 29) 3' UTR (NM_002271, exon 29 of 29) 68669 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr18-1487 chr18 64180202 64180412 + 9.19 0.000 intron (NR_033881, intron 2 of 9) intron (NR_033881, intron 2 of 9) -31281 NR_027245 221241 Hs.567778 NM_152728 ENSG00000179676 LINC00305 C18orf20|HsT1235|NCRNA00305 long intergenic non-protein coding RNA 305 ncRNA chr17-5399 chr17 33334225 33334435 + 9.19 0.000 intron (NM_001094, intron 1 of 9) MIRb|SINE|MIR -41342 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr1-14385 chr1 43724851 43725061 + 9.19 0.000 intron (NR_125986, intron 1 of 3) L2c|LINE|L2 2387 NR_125986 101929592 NR_125986 ENSG00000229444 LOC101929592 - uncharacterized LOC101929592 ncRNA chr4-2947 chr4 102348380 102348590 + 9.07 0.000 Intergenic 7SLRNA|srpRNA|srpRNA -3003 NM_001135146 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr22-1382 chr22 36766064 36766274 + 9.07 0.000 exon (NM_001363003, exon 5 of 8) exon (NM_001363003, exon 5 of 8) 9950 NM_006860 11020 Hs.415172 NM_006860 ENSG00000100360 IFT27 BBS19|RABL4|RAYL intraflagellar transport 27 protein-coding chr1-9742 chr1 54229890 54230100 + 9.07 0.000 intron (NM_001009955, intron 13 of 16) intron (NM_001009955, intron 13 of 16) -6448 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr2-8808 chr2 168583582 168583792 + 9.07 0.000 TTS (NR_039933) TTS (NR_039933) 744 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr6-6861 chr6 10028274 10028484 + 9.07 0.000 Intergenic Intergenic -376123 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr4-8447 chr4 154958366 154958576 + 9.07 0.000 Intergenic L1ME1|LINE|L1 176966 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr15-3248 chr15 75312990 75313200 + 9.07 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -22968 NM_001321847 54939 Hs.351327 NM_017828 ENSG00000140365 COMMD4 - COMM domain containing 4 protein-coding chr2-5501 chr2 144015875 144016085 + 9.07 0.000 intron (NM_001354355, intron 7 of 13) MIRb|SINE|MIR 78913 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr22-2101 chr22 25243336 25243546 + 9.07 0.000 Intergenic Intergenic 23802 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding chr2-6945 chr2 113209190 113209400 + 9.07 0.000 TTS (NM_012455) TTS (NM_012455) -26232 NR_047570 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr7-4576 chr7 7606208 7606418 + 9.07 0.000 intron (NM_001370078, intron 8 of 8) intron (NM_001370078, intron 8 of 8) -34439 NM_001302348 729852 Hs.652371 NM_001302348 ENSG00000219545 UMAD1 RPA3-AS1|RPA3OS UBAP1-MVB12-associated (UMA) domain containing 1 protein-coding chr6-4067 chr6 138289602 138289812 + 9.07 0.000 intron (NM_020340, intron 17 of 33) intron (NM_020340, intron 17 of 33) -71217 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr5-5276 chr5 122619771 122619981 + 9.07 0.000 Intergenic HERVH-int|LTR|ERV1 -35276 NR_134281 101927357 Hs.639856 NR_134281 LOC101927357 - uncharacterized LOC101927357 ncRNA chr5-2710 chr5 104479349 104479559 + 9.07 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -620020 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr12-4398 chr12 6306805 6307015 + 9.07 0.000 Intergenic L2c|LINE|L2 -3526 NM_018173 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr6-3803 chr6 27518950 27519160 + 9.07 0.000 Intergenic CpG -45937 NM_007149 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding chr13-1289 chr13 30465011 30465221 + 9.07 0.000 promoter-TSS (NM_001313892) promoter-TSS (NM_001313892) 124 NM_001370341 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr8-5015 chr8 5518511 5518721 + 9.07 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -523702 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr19-4251 chr19 55361209 55361419 + 9.07 0.000 intron (NM_001145402, intron 4 of 10) intron (NM_001145402, intron 4 of 10) 1946 NM_001145402 284418 Hs.528319 NM_001145402 ENSG00000180043 FAM71E2 C19orf16 family with sequence similarity 71 member E2 protein-coding chr16-3586 chr16 71535692 71535902 + 9.07 0.000 intron (NM_001166395, intron 1 of 1) LTR75B|LTR|ERVL 9371 NM_001166395 10164 Hs.251383 NM_005769 ENSG00000140835 CHST4 GST3|GlcNAc6ST2|HECGLCNAC6ST|LSST carbohydrate sulfotransferase 4 protein-coding chr14-4211 chr14 95496075 95496285 + 9.07 0.000 Intergenic L2a|LINE|L2 -20345 NM_001363692 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|KASH3|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chr7-6472 chr7 3767019 3767229 + 9.07 0.000 intron (NM_152744, intron 4 of 44) intron (NM_152744, intron 4 of 44) -362561 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr15-2284 chr15 59900114 59900324 + 9.07 0.000 Intergenic Intergenic -104092 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr2-7617 chr2 26670228 26670438 + 9.07 0.000 Intergenic LTR16A2|LTR|ERVL -22389 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr1-9418 chr1 32429060 32429270 + 9.07 0.000 Intergenic AluSz|SINE|Alu -34724 NM_001143890 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 - BSD domain containing 1 protein-coding chr10-6220 chr10 48720066 48720276 + 9.07 0.000 intron (NM_020945, intron 3 of 61) intron (NM_020945, intron 3 of 61) 34708 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr18-1398 chr18 69623843 69624053 + 9.07 0.000 intron (NM_152721, intron 3 of 7) intron (NM_152721, intron 3 of 7) 154017 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr3-3717 chr3 179801235 179801445 + 9.07 0.000 non-coding (NR_146167, exon 14 of 14) non-coding (NR_146167, exon 14 of 14) -96854 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr6-3187 chr6 129195722 129195932 + 9.07 0.000 intron (NM_000426, intron 12 of 64) intron (NM_000426, intron 12 of 64) 312686 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr13-1328 chr13 26601822 26602032 + 9.07 0.000 intron (NM_006646, intron 1 of 9) intron (NM_006646, intron 1 of 9) 44224 NM_001291965 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr3-3521 chr3 31166529 31166739 + 9.07 0.000 Intergenic MER58A|DNA|hAT-Charlie -4847 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr9-4323 chr9 126547740 126547950 + 9.07 0.000 Intergenic Intergenic -66598 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr9-5371 chr9 91143388 91143598 + 9.07 0.000 intron (NR_135306, intron 2 of 2) intron (NR_135306, intron 2 of 2) 24431 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr21-811 chr21 21463644 21463854 + 9.07 0.000 intron (NM_001352592, intron 13 of 18) intron (NM_001352592, intron 13 of 18) 273570 NR_038872 378828 Hs.551009 NR_038872 ENSG00000238265 LINC00317 C21orf117|NCRNA00317|PRED89 long intergenic non-protein coding RNA 317 ncRNA chr11-7050 chr11 119942105 119942315 + 9.07 0.000 Intergenic Intergenic 186643 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr6-4876 chr6 89721211 89721421 + 9.07 0.000 intron (NM_014611, intron 40 of 101) intron (NM_014611, intron 40 of 101) -82569 NM_020466 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chr3-5542 chr3 2430055 2430265 + 9.07 0.000 intron (NM_175607, intron 3 of 24) AluY|SINE|Alu 191331 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr11-7536 chr11 13276839 13277049 + 9.07 0.000 promoter-TSS (NR_147785) promoter-TSS (NR_147785) 292 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr11-5035 chr11 85917458 85917668 + 9.07 0.000 intron (NM_001286159, intron 10 of 10) intron (NM_001286159, intron 10 of 10) 62462 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr2-6289 chr2 56025747 56025957 + 9.07 0.000 intron (NR_126406, intron 1 of 2) intron (NR_126406, intron 1 of 2) 21474 NR_126406 104355290 Hs.580331 NR_126406 MIR217HG MIR216AHG|MIR216BHG MIR217 host gene ncRNA chr19-6847 chr19 42875465 42875675 + 9.07 0.000 intron (NM_001184826, intron 2 of 5) LTR8B|LTR|ERV1 4143 NM_001297773 5669 Hs.709192 NM_006905 ENSG00000231924 PSG1 B1G1|CD66f|DHFRP2|FL-NCA-1/2|PBG1|PS-beta-C/D|PS-beta-G-1|PSBG-1|PSBG1|PSG95|PSGGA|PSGIIA|SP1 pregnancy specific beta-1-glycoprotein 1 protein-coding chr14-1405 chr14 58491563 58491773 + 9.07 0.000 intron (NM_001329947, intron 25 of 29) intron (NM_001329947, intron 25 of 29) 51987 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr8-4752 chr8 142755464 142755674 + 9.07 0.000 Intergenic Intergenic -3037 NM_205545 137797 Hs.441280 NM_205545 ENSG00000197353 LYPD2 LYPDC2|UNQ430 LY6/PLAUR domain containing 2 protein-coding chr2-6064 chr2 143607671 143607881 + 9.07 0.000 intron (NM_018460, intron 11 of 13) intron (NM_018460, intron 11 of 13) -329291 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr1-4416 chr1 205711278 205711488 + 9.07 0.000 Intergenic Intergenic -30874 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chr10-4182 chr10 97771480 97771690 + 9.07 0.000 exon (NM_003015, exon 1 of 3) exon (NM_003015, exon 1 of 3) 414 NM_003015 6425 Hs.279565 NM_003015 ENSG00000120057 SFRP5 SARP3 secreted frizzled related protein 5 protein-coding chr7-3810 chr7 94355610 94355820 + 9.07 0.000 Intergenic Intergenic 36477 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr7-8297 chr7 39734581 39734791 + 9.07 0.000 intron (NR_026999, intron 1 of 11) intron (NR_026999, intron 1 of 11) 1118 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr3-1613 chr3 14459344 14459554 + 9.07 0.000 intron (NR_103507, intron 6 of 13) intron (NR_103507, intron 6 of 13) 56843 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr2-8411 chr2 116697542 116697752 + 9.07 0.000 Intergenic MIR|SINE|MIR -1117044 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr10-4461 chr10 74794953 74795163 + 9.07 0.000 Intergenic L1ME3C|LINE|L1 -30197 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr5-6732 chr5 75746533 75746743 + 9.07 0.000 Intergenic Intergenic -29201 NM_001099271 134359 Hs.432726 NM_152408 ENSG00000152359 POC5 C5orf37 POC5 centriolar protein protein-coding chr1-5638 chr1 24340569 24340779 + 9.07 0.000 intron (NM_198174, intron 8 of 15) MIRc|SINE|MIR 17634 NM_021180 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr9-8446 chr9 122477442 122477652 + 9.07 0.000 exon (NM_001004451, exon 1 of 1) exon (NM_001004451, exon 1 of 1) 379 NM_001004451 347168 Hs.632692 NM_001004451 ENSG00000136834 OR1J1 OR9-18|hg32 olfactory receptor family 1 subfamily J member 1 protein-coding chr6-8107 chr6 126601468 126601678 + 9.07 0.000 Intergenic L2|LINE|L2 116942 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr15-1061 chr15 69648312 69648522 + 9.07 0.000 intron (NR_126437, intron 3 of 5) intron (NR_126437, intron 3 of 5) 56217 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr16-5364 chr16 85880329 85880539 + 9.07 0.000 Intergenic MamGypsy2-LTR|LTR|Gypsy -18728 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr1-10575 chr1 175034001 175034211 + 9.07 0.000 Intergenic Intergenic -10651 NR_037606 63931 Hs.654858 NM_022100 ENSG00000120333 MRPS14 COXPD38|DJ262D12.2|HSMRPS14|MRP-S14|S14mt mitochondrial ribosomal protein S14 protein-coding chr8-2867 chr8 138727532 138727742 + 9.07 0.000 intron (NM_152888, intron 23 of 64) intron (NM_152888, intron 23 of 64) 186404 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr11-10084 chr11 85525755 85525965 + 9.07 0.000 intron (NM_001142699, intron 3 of 27) L1MEc|LINE|L1 101410 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr15-2945 chr15 48470023 48470233 + 9.07 0.000 intron (NM_000138, intron 36 of 65) intron (NM_000138, intron 36 of 65) 137931 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr3-3497 chr3 11498581 11498791 + 9.07 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 70112 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr1-4030 chr1 193558588 193558798 + 9.07 0.000 Intergenic Intergenic 253948 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr1-13828 chr1 19561952 19562162 + 9.07 0.000 Intergenic LTR37-int|LTR|ERV1 34775 NR_135054 105378614 Hs.430098 NR_135054 ENSG00000235185 LOC105378614 - uncharacterized LOC105378614 ncRNA chr14-3604 chr14 51045168 51045378 + 9.07 0.000 intron (NM_015163, intron 1 of 9) L3|LINE|CR1 50431 NM_015163 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr6-2384 chr6 142885215 142885425 + 9.07 0.000 intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 59856 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr7-6107 chr7 120647081 120647291 + 9.07 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 210958 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr7-4752 chr7 72041428 72041638 + 9.07 0.000 intron (NM_001363460, intron 3 of 5) AluSx|SINE|Alu 295858 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr7-4152 chr7 90721096 90721306 + 9.07 0.000 intron (NM_001287136, intron 1 of 13) intron (NM_001287136, intron 1 of 13) 11385 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr14-5024 chr14 79061533 79061743 + 9.07 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -138344 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr3-3960 chr3 52171617 52171827 + 9.07 0.000 Intergenic Intergenic -17299 NM_015426 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr11-4611 chr11 4380904 4381114 + 9.07 0.000 Intergenic MLT2C1|LTR|ERVL -12623 NM_001005161 143496 Hs.447463 NM_001005161 ENSG00000221996 OR52B4 OR11-3 olfactory receptor family 52 subfamily B member 4 (gene/pseudogene) protein-coding chr11-6531 chr11 69477486 69477696 + 9.07 0.000 Intergenic Intergenic -7970 NR_120544 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr8-3166 chr8 95113318 95113528 + 9.07 0.000 intron (NR_148914, intron 10 of 11) intron (NR_148914, intron 10 of 11) -20362 NM_024613 79666 Hs.29724 NM_024613 ENSG00000175895 PLEKHF2 EAPF|PHAFIN2|ZFYVE18 pleckstrin homology and FYVE domain containing 2 protein-coding chr2-13673 chr2 163509573 163509783 + 9.07 0.000 Intergenic Intergenic 226330 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr10-7154 chr10 101892268 101892478 + 9.07 0.000 intron (NM_024541, intron 23 of 25) AluJb|SINE|Alu -48453 NM_173192 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr16-2023 chr16 10182757 10182967 + 9.07 0.000 promoter-TSS (NM_000833) promoter-TSS (NM_000833) 46 NM_000833 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr10-5124 chr10 50360666 50360876 + 9.07 0.000 intron (NM_147156, intron 6 of 10) intron (NM_147156, intron 6 of 10) -112161 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr9-6891 chr9 89111508 89111718 + 9.07 0.000 intron (NM_016848, intron 2 of 11) intron (NM_016848, intron 2 of 11) 67205 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr4-5593 chr4 185023821 185024031 + 9.07 0.000 Intergenic Intergenic 5085 NM_001300782 391723 Hs.531242 NM_001029887 ENSG00000187821 HELT HCM1228|HESL|Mgn|bHLHb44 helt bHLH transcription factor protein-coding chr1-7932 chr1 168689927 168690137 + 9.07 0.000 Intergenic Intergenic 39174 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr17-5872 chr17 68436343 68436553 + 9.07 0.000 non-coding (NR_135471, exon 5 of 12) non-coding (NR_135471, exon 5 of 12) -11900 NR_030365 693220 NR_030365 ENSG00000207561 MIR635 MIRN635|hsa-mir-635 microRNA 635 ncRNA chr16-2196 chr16 81036625 81036835 + 9.07 0.000 promoter-TSS (NM_001300728) promoter-TSS (NM_001300728) -468 NM_001300728 23300 Hs.16349 NM_015251 ENSG00000166454 ATMIN ASCIZ|ZNF822 ATM interactor protein-coding chr11-2364 chr11 118878151 118878361 + 9.07 0.000 Intergenic Intergenic -5636 NM_001716 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chrX-3542 chrX 56298156 56298366 + 9.07 0.000 Intergenic Intergenic 65103 NM_001324099 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr19-5120 chr19 58503804 58504014 + 9.07 0.000 intron (NM_012254, intron 3 of 9) AluSz6|SINE|Alu 8083 NM_012254 10998 Hs.292177 NM_012254 ENSG00000083807 SLC27A5 ACSB|ACSVL6|BACS|BAL|FACVL3|FATP-5|FATP5|VLACSR|VLCS-H2|VLCSH2 solute carrier family 27 member 5 protein-coding chrX-855 chrX 133792547 133792757 + 9.07 0.000 intron (NM_001164619, intron 1 of 6) intron (NM_001164619, intron 1 of 6) -104791 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr8-4165 chr8 78438455 78438665 + 9.07 0.000 Intergenic LTR33A_|LTR|ERVL -77780 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr3-7384 chr3 73341314 73341524 + 9.07 0.000 Intergenic Intergenic 92576 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr7-8560 chr7 57416047 57416257 + 9.07 0.000 Intergenic Intergenic 11127 NR_036102 100422939 NR_036102 ENSG00000266168 MIR3147 mir-3147 microRNA 3147 ncRNA chr2-5093 chr2 12177060 12177270 + 9.07 0.000 intron (NR_110196, intron 3 of 5) intron (NR_110196, intron 3 of 5) -21965 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr17-2521 chr17 13079170 13079380 + 9.07 0.000 Intergenic Intergenic -61211 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr1-7240 chr1 226215347 226215557 + 9.07 0.000 Intergenic Intergenic -8212 NM_031944 83881 Hs.282079 NM_031944 ENSG00000185155 MIXL1 MILD1|MIX|MIXL Mix paired-like homeobox protein-coding chr19-1784 chr19 46829897 46830107 + 9.07 0.000 TTS (NR_024258) TTS (NR_024258) 702 NR_024258 100170220 Hs.541243 NR_024258 SNAR-E - small NF90 (ILF3) associated RNA E snRNA chr11-8798 chr11 11105502 11105712 + 9.07 0.000 Intergenic MER66B|LTR|ERV1 247390 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr12-4055 chr12 50895222 50895432 + 9.07 0.000 Intergenic AluSz|SINE|Alu -29688 NM_014033 25840 Hs.711113 NM_014033 ENSG00000185432 METTL7A AAM-B|AAMB methyltransferase like 7A protein-coding chr4-3050 chr4 140344180 140344390 + 9.07 0.000 intron (NM_032547, intron 2 of 4) intron (NM_032547, intron 2 of 4) 824 NM_001153585 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr8-3374 chr8 53528146 53528356 + 9.07 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -4286 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr17-7434 chr17 11263545 11263755 + 9.07 0.000 intron (NM_001173461, intron 2 of 3) intron (NM_001173461, intron 2 of 3) 22227 NM_001173461 388336 Hs.592124 NM_175903 ENSG00000188803 SHISA6 - shisa family member 6 protein-coding chr3-7787 chr3 79958036 79958246 + 9.07 0.000 Intergenic Intergenic -190143 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr2-9167 chr2 213036925 213037135 + 9.07 0.000 intron (NM_001371277, intron 5 of 6) intron (NM_001371277, intron 5 of 6) -110694 NR_039936 100616472 NR_039936 ENSG00000283637 MIR4776-2 mir-4776-2 microRNA 4776-2 ncRNA chr2-2994 chr2 45435434 45435644 + 9.07 0.000 intron (NM_018079, intron 16 of 20) intron (NM_018079, intron 16 of 20) 175728 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr5-5929 chr5 67643938 67644148 + 9.07 0.000 intron (NR_147169, intron 1 of 2) intron (NR_147169, intron 1 of 2) 2746 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr1-10733 chr1 197202072 197202282 + 9.07 0.000 intron (NM_001257965, intron 1 of 14) intron (NM_001257965, intron 1 of 14) 673 NM_001257965 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr18-2074 chr18 48319867 48320077 + 9.07 0.000 intron (NM_001371290, intron 5 of 9) L2a|LINE|L2 55655 NM_001371291 chr2-6219 chr2 26807817 26808027 + 9.07 0.000 Intergenic Intergenic 21866 NM_001809 1058 Hs.1594 NM_001809 ENSG00000115163 CENPA CENP-A|CenH3 centromere protein A protein-coding chr17-3869 chr17 48240674 48240884 + 9.07 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -53568 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr12-7561 chr12 72701225 72701435 + 9.07 0.000 Intergenic Intergenic -427821 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr4-4571 chr4 74874872 74875082 + 9.07 0.000 Intergenic Intergenic -58139 NM_015393 25849 Hs.105460 NM_015393 ENSG00000169116 PARM1 Cipar1|DKFZP564O0823|PARM-1|WSC4 prostate androgen-regulated mucin-like protein 1 protein-coding chr8-4717 chr8 141242722 141242932 + 9.07 0.000 intron (NM_001286646, intron 1 of 7) intron (NM_001286646, intron 1 of 7) -11740 NR_161376 105375787 Hs.567685 NR_161376 LOC105375787 - uncharacterized LOC105375787 ncRNA chr9-6046 chr9 136519698 136519908 + 9.07 0.000 promoter-TSS (NR_039820) promoter-TSS (NR_039820) -177 NR_039820 100616242 NR_039820 ENSG00000263403 MIR4673 - microRNA 4673 ncRNA chr19-3369 chr19 11576374 11576584 + 9.07 0.000 exon (NM_001322023, exon 5 of 6) exon (NM_001322023, exon 5 of 6) 1166 NM_001611 54 Hs.1211 NM_001611 ENSG00000102575 ACP5 HPAP|TRACP5a|TRACP5b|TRAP|TrATPase acid phosphatase 5, tartrate resistant protein-coding chrX-3012 chrX 54696009 54696219 + 9.07 0.000 Intergenic Intergenic 102141 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr14-2080 chr14 70368181 70368391 + 9.07 0.000 3' UTR (NM_018373, exon 4 of 4) 3' UTR (NM_018373, exon 4 of 4) -8603 NM_016468 51241 Hs.709581 NM_016468 ENSG00000133983 COX16 C14orf112|HSPC203|hCOX16 cytochrome c oxidase assembly factor COX16 protein-coding chr21-792 chr21 45598608 45598818 + 9.07 0.000 non-coding (NR_146912, exon 2 of 2) non-coding (NR_146912, exon 2 of 2) 5059 NR_146912 105372840 Hs.406003 NR_146912 ENSG00000233922 LINC01694 - long intergenic non-protein coding RNA 1694 ncRNA chr11-3343 chr11 119173661 119173871 + 9.07 0.000 exon (NM_001282143, exon 5 of 10) exon (NM_001282143, exon 5 of 10) 5041 NM_001282144 79671 Hs.524082 NM_024618 ENSG00000160703 NLRX1 CLR11.3|DLNB26|NOD26|NOD5|NOD9 NLR family member X1 protein-coding chr8-1023 chr8 19341751 19341961 + 9.07 0.000 intron (NM_001363110, intron 4 of 8) AluJr|SINE|Alu 27880 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr17-5702 chr17 54945081 54945291 + 9.07 0.000 intron (NM_001321176, intron 12 of 16) MLT1C|LTR|ERVL-MaLR 23468 NR_135677 1353 Hs.591171 NM_004375 ENSG00000166260 COX11 COX11P cytochrome c oxidase copper chaperone COX11 protein-coding chr12-4569 chr12 29725935 29726145 + 9.07 0.000 intron (NM_001367875, intron 5 of 19) intron (NM_001367875, intron 5 of 19) 57902 NM_001193451 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr19-5626 chr19 4144077 4144287 + 9.07 0.000 Intergenic Intergenic -9449 NM_001271997 84699 Hs.247744 NM_032607 ENSG00000060566 CREB3L3 CREB-H|CREBH|HYST1481 cAMP responsive element binding protein 3 like 3 protein-coding chr13-1959 chr13 108078495 108078705 + 9.07 0.000 Intergenic LTR16B1|LTR|ERVL 136182 NM_002312 3981 Hs.166091 NM_002312 ENSG00000174405 LIG4 LIG4S DNA ligase 4 protein-coding chr8-2278 chr8 100828481 100828691 + 9.07 0.000 Intergenic Intergenic -106498 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr3-4703 chr3 53247881 53248091 + 9.07 0.000 intron (NM_001258028, intron 1 of 14) L2b|LINE|L2 8036 NM_001064 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr19-5534 chr19 49922749 49922959 + 9.07 0.000 intron (NM_001193357, intron 1 of 1) intron (NM_001193357, intron 1 of 1) -5848 NM_012068 22809 Hs.9754 NM_012068 ENSG00000169136 ATF5 ATFX|HMFN0395 activating transcription factor 5 protein-coding chr6-1703 chr6 24452704 24452914 + 9.07 0.000 intron (NM_001503, intron 14 of 24) intron (NM_001503, intron 14 of 24) 36769 NM_001503 2822 Hs.533291 NM_001503 ENSG00000112293 GPLD1 GPIPLD|GPIPLDM|PIGPLD|PIGPLD1|PLD glycosylphosphatidylinositol specific phospholipase D1 protein-coding chrX-4515 chrX 66187688 66187898 + 9.07 0.000 intron (NM_001367233, intron 4 of 20) L1PB1|LINE|L1 20043 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr3-8365 chr3 82217510 82217720 + 9.07 0.000 intron (NR_147146, intron 3 of 8) HAL1|LINE|L1 231473 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr9-2269 chr9 112174821 112175031 + 9.07 0.000 intron (NM_022486, intron 1 of 16) CpG 371 NM_001282643 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chrX-668 chrX 143874464 143874674 + 9.07 0.000 Intergenic L1MA9|LINE|L1 -9502 NM_001012989 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr4-1908 chr4 39432769 39432979 + 9.07 0.000 intron (NM_175737, intron 1 of 4) MIRb|SINE|MIR 20964 NR_049857 100847065 NR_049857 ENSG00000264621 MIR5591 - microRNA 5591 ncRNA chr16-4632 chr16 72715471 72715681 + 9.07 0.000 Intergenic MLT1H-int|LTR|ERVL-MaLR -50606 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr12-3540 chr12 132640000 132640210 + 9.07 0.000 intron (NM_006231, intron 39 of 48) MER54B|LTR|ERVL 21329 NM_174872 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr1-10815 chr1 203091133 203091343 + 9.07 0.000 Intergenic Intergenic -5226 NM_002479 4656 Hs.2830 NM_002479 ENSG00000122180 MYOG MYF4|bHLHc3|myf-4 myogenin protein-coding chr11-3463 chr11 71710340 71710550 + 9.07 0.000 Intergenic HERVS71-int|LTR|ERV1 -77066 NM_001099653 55199 Hs.567527 NM_018172 ENSG00000158483 FAM86C1 FAM86C family with sequence similarity 86 member C1 protein-coding chr8-6696 chr8 83330648 83330858 + 9.07 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -73005 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr16-1707 chr16 14399404 14399614 + 9.07 0.000 Intergenic Intergenic -29243 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr12-4796 chr12 54433252 54433462 + 9.07 0.000 intron (NR_120487, intron 3 of 3) intron (NR_120487, intron 3 of 3) 13572 NR_120488 102724050 Hs.670941 NR_120486 ENSG00000258137 LOC102724050 - uncharacterized LOC102724050 ncRNA chr12-7022 chr12 33255245 33255455 + 9.07 0.000 Intergenic Intergenic 184469 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding chr7-873 chr7 101165571 101165781 + 9.07 0.000 promoter-TSS (NM_003378) promoter-TSS (NM_003378) -107 NM_003378 7425 Hs.587325 NM_003378 ENSG00000128564 VGF SCG7|SgVII VGF nerve growth factor inducible protein-coding chr7-3134 chr7 54839675 54839885 + 9.07 0.000 Intergenic Intergenic 80467 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr19-4938 chr19 44607095 44607305 + 9.07 0.000 Intergenic Intergenic -6363 NM_001205280 147710 Hs.512509 NM_001205280 ENSG00000216588 IGSF23 - immunoglobulin superfamily member 23 protein-coding chr20-1513 chr20 36733656 36733866 + 9.07 0.000 intron (NM_032013, intron 1 of 15) intron (NM_032013, intron 1 of 15) 12329 NM_022477 57446 Hs.437338 NM_022477 ENSG00000101079 NDRG3 - NDRG family member 3 protein-coding chr5-2851 chr5 73168641 73168851 + 9.07 0.000 Intergenic ERVL-E-int|LTR|ERVL -4447 NM_153217 134288 Hs.508588 NM_153217 ENSG00000164325 TMEM174 - transmembrane protein 174 protein-coding chr3-5839 chr3 32462670 32462880 + 9.07 0.000 Intergenic HERVH-int|LTR|ERV1 40077 NM_017801 54918 Hs.380627 NM_017801 ENSG00000091317 CMTM6 CKLFSF6|PRO2219 CKLF like MARVEL transmembrane domain containing 6 protein-coding chr1-10339 chr1 153678794 153679004 + 9.07 0.000 5' UTR (NM_000906, exon 1 of 22) 5' UTR (NM_000906, exon 1 of 22) 211 NM_000906 4881 Hs.490330 NM_000906 ENSG00000169418 NPR1 ANPRA|ANPa|GUC2A|GUCY2A|NPRA natriuretic peptide receptor 1 protein-coding chr8-2331 chr8 13237593 13237803 + 9.07 0.000 intron (NM_001348082, intron 5 of 16) L1PB2|LINE|L1 38823 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr6-3938 chr6 85140618 85140828 + 9.07 0.000 Intergenic Intergenic 249463 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr6-5232 chr6 135537795 135538005 + 9.07 0.000 intron (NR_152845, intron 2 of 4) intron (NR_152845, intron 2 of 4) 40099 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr5-3480 chr5 171628393 171628603 + 9.07 0.000 Intergenic L2a|LINE|L2 -157374 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr12-5714 chr12 116138294 116138504 + 9.07 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) 10255 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr12-3283 chr12 70939924 70940134 + 9.07 0.000 Intergenic SATR1|Satellite|Satellite -19291 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr8-3862 chr8 35938007 35938217 + 9.07 0.000 Intergenic HERV9-int|LTR|ERV1 -227792 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr12-3568 chr12 25591236 25591446 + 9.07 0.000 intron (NM_001352232, intron 1 of 10) L1MA2|LINE|L1 -38058 NM_152590 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr7-7578 chr7 123907406 123907616 + 9.07 0.000 Intergenic LTR49|LTR|ERV1 -17730 NM_003117 6677 Hs.121494 NM_003117 ENSG00000106304 SPAM1 HEL-S-96n|HYA1|HYAL1|HYAL3|HYAL5|PH-20|PH20|SPAG15 sperm adhesion molecule 1 protein-coding chr10-3722 chr10 113751299 113751509 + 9.07 0.000 promoter-TSS (NM_001193435) promoter-TSS (NM_001193435) -278 NM_001193435 79949 Hs.228320 NM_024889 ENSG00000148735 PLEKHS1 C10orf81|HEL185 pleckstrin homology domain containing S1 protein-coding chr8-6308 chr8 43342367 43342577 + 9.07 0.000 intron (NM_001005365, intron 11 of 13) intron (NM_001005365, intron 11 of 13) 50030 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr11-8355 chr11 80978313 80978523 + 9.07 0.000 Intergenic Intergenic -215615 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chrX-3126 chrX 9908075 9908285 + 9.07 0.000 intron (NM_001649, intron 5 of 9) intron (NM_001649, intron 5 of 9) -4192 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr17-7946 chr17 46938523 46938733 + 9.07 0.000 non-coding (NR_148350, exon 5 of 7) non-coding (NR_148350, exon 5 of 7) 15468 NR_148351 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr9-4310 chr9 123265999 123266209 + 9.07 0.000 intron (NM_018387, intron 1 of 18) intron (NM_018387, intron 1 of 18) 2482 NM_001171137 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr13-1595 chr13 42354358 42354568 + 9.07 0.000 Intergenic Intergenic -70429 NR_135319 105370177 NR_135319 ENSG00000283554 LINC02341 - long intergenic non-protein coding RNA 2341 ncRNA chr9-6530 chr9 111807214 111807424 + 9.07 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -12382 NR_109816 158401 Hs.428209 NM_173521 ENSG00000165181 SHOC1 C9orf84|ZIP2|ZIP2H shortage in chiasmata 1 protein-coding chr17-3417 chr17 10745237 10745447 + 9.07 0.000 intron (NR_073456, intron 2 of 3) intron (NR_073456, intron 2 of 3) -15013 NM_001330139 388335 Hs.462230 NM_001004313 ENSG00000187824 TMEM220 - transmembrane protein 220 protein-coding chr2-4465 chr2 232534587 232534797 + 9.07 0.000 intron (NM_001256657, intron 10 of 10) MER91B|DNA|hAT-Tip100 -5000 NM_005199 1146 Hs.248101 NM_005199 ENSG00000196811 CHRNG ACHRG cholinergic receptor nicotinic gamma subunit protein-coding chr1-10663 chr1 183608245 183608455 + 9.07 0.000 Intergenic MER44B|DNA|TcMar-Tigger -17436 NM_001127651 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr18-3129 chr18 38123784 38123994 + 9.07 0.000 Intergenic LTR9|LTR|ERV1 466754 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr10-4499 chr10 85929137 85929347 + 9.07 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 335546 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr3-5364 chr3 146222595 146222805 + 9.07 0.000 intron (NM_001128306, intron 1 of 6) L2a|LINE|L2 27915 NM_001128305 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr5-2620 chr5 151068157 151068367 + 9.07 0.000 intron (NM_001252390, intron 1 of 17) intron (NM_001252390, intron 1 of 17) -3131 NM_001258456 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr2-7048 chr2 159774909 159775119 + 9.07 0.000 intron (NM_001198764, intron 4 of 4) L2a|LINE|L2 23194 NM_014880 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr6-3432 chr6 129697105 129697315 + 9.07 0.000 intron (NM_033515, intron 1 of 14) intron (NM_033515, intron 1 of 14) 12967 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr10-4271 chr10 2012374 2012584 + 9.07 0.000 intron (NR_040253, intron 2 of 2) intron (NR_040253, intron 2 of 2) 1869 NR_040253 282980 Hs.576810 NR_040253 ENSG00000234962 LINC00700 - long intergenic non-protein coding RNA 700 ncRNA chr10-3185 chr10 88991717 88991927 + 9.07 0.000 promoter-TSS (NM_001320855) promoter-TSS (NM_001320855) 391 NR_135314 355 Hs.244139 NM_000043 ENSG00000026103 FAS ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 Fas cell surface death receptor protein-coding chr7-4994 chr7 158070688 158070898 + 9.07 0.000 intron (NM_130843, intron 10 of 21) intron (NM_130843, intron 10 of 21) 216208 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr2-6284 chr2 55231668 55231878 + 9.07 0.000 promoter-TSS (NM_001135592) promoter-TSS (NM_001135592) -130 NM_001135592 6233 Hs.311640 NM_002954 ENSG00000143947 RPS27A CEP80|HEL112|S27A|UBA80|UBC|UBCEP1|UBCEP80 ribosomal protein S27a protein-coding chr14-1702 chr14 103950638 103950848 + 9.07 0.000 intron (NM_153046, intron 1 of 35) MER65A|LTR|ERV1 -8214 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr4-1899 chr4 22099996 22100206 + 9.07 0.000 Intergenic Intergenic -151350 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr22-702 chr22 41021668 41021878 + 9.07 0.000 Intergenic CpG 51948 NR_132979 106635682 NR_132979 SNORD140 - small nucleolar RNA, C/D box 140 snoRNA chr16-2516 chr16 306925 307135 + 9.07 0.000 intron (NR_134879, intron 3 of 8) intron (NR_134879, intron 3 of 8) 23893 NM_006849 64714 Hs.66581 NM_006849 ENSG00000185615 PDIA2 PDA2|PDI|PDIP|PDIR protein disulfide isomerase family A member 2 protein-coding chr9-8497 chr9 124520391 124520601 + 9.07 0.000 3' UTR (NM_033334, exon 10 of 10) 3' UTR (NM_033334, exon 10 of 10) -13097 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr18-1455 chr18 45254908 45255118 + 9.07 0.000 intron (NM_001371319, intron 4 of 23) intron (NM_001371319, intron 4 of 23) 42018 NM_001242692 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chrX-1381 chrX 153547389 153547599 + 9.07 0.000 intron (NM_001001344, intron 6 of 19) intron (NM_001001344, intron 6 of 19) 11372 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr1-5548 chr1 226739301 226739511 + 9.07 0.000 promoter-TSS (NM_002221) promoter-TSS (NM_002221) -231 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr20-2770 chr20 52276676 52276886 + 9.07 0.000 Intergenic L2c|LINE|L2 -84796 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr17-7494 chr17 16573001 16573211 + 9.07 0.000 Intergenic AluSq2|SINE|Alu -3894 NM_001346171 57336 Hs.99724 NM_020653 ENSG00000141040 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding chr14-2703 chr14 87057893 87058103 + 9.07 0.000 Intergenic MIRb|SINE|MIR 152220 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr7-8884 chr7 91656484 91656694 + 9.07 0.000 Intergenic Intergenic 224113 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr1-15567 chr1 159143724 159143934 + 9.07 0.000 Intergenic Intergenic -27786 NM_001346510 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr10-5793 chr10 106440383 106440593 + 9.07 0.000 Intergenic MER66-int|LTR|ERV1 300323 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr8-2861 chr8 134469292 134469502 + 9.07 0.000 Intergenic Intergenic -128674 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr18-1952 chr18 36718094 36718304 + 9.07 0.000 exon (NM_025135, exon 16 of 25) exon (NM_025135, exon 16 of 25) -54781 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr14-3615 chr14 54712434 54712644 + 9.07 0.000 intron (NM_001161576, intron 2 of 10) intron (NM_001161576, intron 2 of 10) -42294 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chrX-3990 chrX 15140503 15140713 + 9.07 0.000 Intergenic Intergenic 129475 NM_001031739 140462 Hs.19404 NM_024087 ENSG00000102048 ASB9 - ankyrin repeat and SOCS box containing 9 protein-coding chr18-1267 chr18 58221546 58221756 + 9.07 0.000 promoter-TSS (NM_001144966) promoter-TSS (NM_001144966) 80 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr16-4822 chr16 87234782 87234992 + 9.07 0.000 Intergenic Intergenic 22772 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr20-1543 chr20 54546306 54546516 + 9.07 0.000 intron (NM_018431, intron 1 of 7) L1PA5|LINE|L1 70818 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chrX-3988 chrX 14904006 14904216 + 9.07 0.000 intron (NM_152581, intron 7 of 14) L1MB7|LINE|L1 18820 NM_001177475 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr2-10370 chr2 171591938 171592148 + 9.07 0.000 Intergenic Intergenic 69569 NM_001127383 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr4-3075 chr4 147195404 147195614 + 9.07 0.000 Intergenic Intergenic 149208 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA chr15-2260 chr15 43200938 43201148 + 9.07 0.000 intron (NM_001114134, intron 12 of 12) AluYk2|SINE|Alu 15640 NM_012142 23582 Hs.36794 NM_012142 ENSG00000166946 CCNDBP1 DIP1|GCIP|HHM cyclin D1 binding protein 1 protein-coding chr2-5760 chr2 221254315 221254525 + 9.07 0.000 Intergenic Intergenic 317884 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr1-16265 chr1 212228062 212228272 + 9.07 0.000 intron (NR_125984, intron 3 of 3) intron (NR_125984, intron 3 of 3) 6569 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr5-6406 chr5 149543291 149543501 + 9.07 0.000 intron (NM_001271742, intron 1 of 9) intron (NM_001271742, intron 1 of 9) 6969 NM_001271742 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding chr21-942 chr21 42193110 42193320 + 9.07 0.000 Intergenic Intergenic -6474 NM_207627 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr5-5380 chr5 134005641 134005851 + 9.07 0.000 promoter-TSS (NR_036624) promoter-TSS (NR_036624) -771 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr10-3666 chr10 101667876 101668086 + 9.07 0.000 intron (NM_022039, intron 4 of 8) intron (NM_022039, intron 4 of 8) 27189 NM_022039 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr15-1098 chr15 66593223 66593433 + 9.07 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) 11138 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr4-5144 chr4 153594313 153594523 + 9.07 0.000 intron (NM_001131007, intron 19 of 34) intron (NM_001131007, intron 19 of 34) -45750 NR_134873 100419170 Hs.382102 NR_134873 ENSG00000250771 LOC100419170 - toll like receptor 2 pseudogene pseudo chr5-8616 chr5 139190480 139190690 + 9.07 0.000 intron (NM_022464, intron 1 of 9) intron (NM_022464, intron 1 of 9) 7783 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr11-6081 chr11 33652258 33652468 + 9.07 0.000 intron (NM_012194, intron 17 of 20) intron (NM_012194, intron 17 of 20) 48377 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr2-6762 chr2 43699349 43699559 + 9.07 0.000 intron (NM_172069, intron 7 of 29) AluJo|SINE|Alu -23025 NM_001101330 728819 NM_001101330 ENSG00000223658 C1GALT1C1L - C1GALT1 specific chaperone 1 like protein-coding chr15-1972 chr15 40344712 40344922 + 9.07 0.000 Intergenic Intergenic -3850 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 CCDC9B C15orf52 coiled-coil domain containing 9B protein-coding chr7-4209 chr7 143140061 143140271 + 9.07 0.000 TTS (NM_002652) TTS (NM_002652) 8089 NM_002652 5304 Hs.99949 NM_002652 ENSG00000159763 PIP GCDFP-15|GCDFP15|GPIP4 prolactin induced protein protein-coding chr16-1463 chr16 88194124 88194334 + 9.07 0.000 promoter-TSS (NR_110944) promoter-TSS (NR_110944) -52 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr2-5256 chr2 56123942 56124152 + 9.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -33665 NR_135590 101927165 Hs.679803 NR_135590 LINC01813 - long intergenic non-protein coding RNA 1813 ncRNA chr20-2704 chr20 47536220 47536430 + 9.07 0.000 intron (NM_181659, intron 1 of 22) AluJb|SINE|Alu 34438 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr5-5805 chr5 176680924 176681134 + 9.07 0.000 Intergenic Intergenic 33545 NM_001366492 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr12-2999 chr12 122416029 122416239 + 9.07 0.000 intron (NM_198240, intron 1 of 23) AluSg7|SINE|Alu 6435 NM_002956 6249 Hs.524809 NM_002956 ENSG00000130779 CLIP1 CLIP|CLIP-170|CLIP170|CYLN1|RSN CAP-Gly domain containing linker protein 1 protein-coding chr3-5953 chr3 46060986 46061196 + 9.07 0.000 Intergenic ERVL-B4-int|LTR|ERVL -33608 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr3-2742 chr3 133884546 133884756 + 9.07 0.000 intron (NM_016577, intron 1 of 7) intron (NM_016577, intron 1 of 7) 11196 NM_001363953 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr11-8100 chr11 43631729 43631939 + 9.07 0.000 Intergenic Intergenic -48904 NM_016142 51144 Hs.132513 NM_016142 ENSG00000149084 HSD17B12 KAR|SDR12C1 hydroxysteroid 17-beta dehydrogenase 12 protein-coding chr11-10481 chr11 118070777 118070987 + 9.07 0.000 intron (NM_001354434, intron 1 of 5) intron (NM_001354434, intron 1 of 5) -6130 NR_110734 56649 Hs.161985 NM_019894 ENSG00000137648 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane serine protease 4 protein-coding chr13-2246 chr13 25626220 25626430 + 9.07 0.000 intron (NM_016529, intron 24 of 36) MSTD|LTR|ERVL-MaLR 157551 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr3-5139 chr3 53600769 53600979 + 9.07 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 106263 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr9-3546 chr9 37716117 37716327 + 9.07 0.000 intron (NM_001371225, intron 5 of 15) L3|LINE|CR1 -37581 NM_001286950 158234 Hs.655614 NM_144964 ENSG00000165275 TRMT10B RG9MTD3|bA3J10.9 tRNA methyltransferase 10B protein-coding chr6-1862 chr6 44788687 44788897 + 9.07 0.000 Intergenic Intergenic -236911 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr16-4229 chr16 17834753 17834963 + 9.07 0.000 Intergenic L2c|LINE|L2 -363898 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chrX-4352 chrX 48476934 48477144 + 9.07 0.000 intron (NM_177439, intron 2 of 13) intron (NM_177439, intron 2 of 13) 840 NM_177439 24140 Hs.23170 NM_012280 ENSG00000068438 FTSJ1 CDLIV|JM23|MRX44|MRX9|SPB1|TRMT7 FtsJ RNA 2'-O-methyltransferase 1 protein-coding chr2-6861 chr2 74427596 74427806 + 9.07 0.000 intron (NM_033046, intron 10 of 12) intron (NM_033046, intron 10 of 12) 5971 NM_001320824 84058 Hs.643480 NM_032118 ENSG00000005448 WDR54 - WD repeat domain 54 protein-coding chr3-3273 chr3 86958578 86958788 + 9.07 0.000 intron (NM_001320494, intron 3 of 3) intron (NM_001320494, intron 3 of 3) 32466 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr12-7684 chr12 88546652 88546862 + 9.07 0.000 intron (NM_000899, intron 1 of 9) L2a|LINE|L2 33714 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr10-8777 chr10 105229766 105229976 + 9.07 0.000 intron (NM_014978, intron 20 of 26) L1MC1|LINE|L1 -563655 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr9-8442 chr9 122175466 122175676 + 9.07 0.000 intron (NM_001286828, intron 3 of 3) Charlie4z|DNA|hAT-Charlie 15663 NM_001286828 254956 Hs.71428 NM_198469 ENSG00000185681 MORN5 C9orf113|C9orf18 MORN repeat containing 5 protein-coding chr6-4956 chr6 103221793 103222003 + 9.07 0.000 Intergenic L1MA4|LINE|L1 1637648 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr19-4991 chr19 46816310 46816520 + 9.07 0.000 Intergenic Intergenic 14289 NR_024258 100170220 Hs.541243 NR_024258 SNAR-E - small NF90 (ILF3) associated RNA E snRNA chr11-6544 chr11 69952122 69952332 + 9.07 0.000 Intergenic Intergenic 111697 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr11-4612 chr11 5046588 5046798 + 9.07 0.000 exon (NM_001001916, exon 1 of 1) exon (NM_001001916, exon 1 of 1) 167 NM_001001916 119679 Hs.553558 NM_001001916 ENSG00000205495 OR52J3 OR11-32 olfactory receptor family 52 subfamily J member 3 protein-coding chr12-2509 chr12 88339347 88339557 + 9.07 0.000 Intergenic L1ME1|LINE|L1 197145 NR_159381 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding chr8-2662 chr8 81047886 81048096 + 9.07 0.000 intron (NM_018440, intron 2 of 8) intron (NM_018440, intron 2 of 8) 64077 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr22-1750 chr22 24391833 24392043 + 9.07 0.000 intron (NM_001254732, intron 13 of 14) intron (NM_001254732, intron 13 of 14) -31659 NM_001278500 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chr14-4403 chr14 30180291 30180501 + 9.07 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -252549 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr1-15610 chr1 161727603 161727813 + 9.07 0.000 3' UTR (NM_001288830, exon 5 of 5) 3' UTR (NM_001288830, exon 5 of 5) 5055 NM_001288830 127943 Hs.517422 NM_001002901 ENSG00000162746 FCRLB FCRL2|FCRLM2|FCRLY|FREB-2|FREB2|FcRY Fc receptor like B protein-coding chr12-6915 chr12 24172378 24172588 + 9.07 0.000 intron (NM_152989, intron 4 of 17) AluJb|SINE|Alu -39938 NR_030625 100126320 NR_030625 ENSG00000216192 MIR920 MIRN920|hsa-mir-920 microRNA 920 ncRNA chr11-8120 chr11 45546723 45546933 + 9.07 0.000 Intergenic Intergenic 118794 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr11-8410 chr11 100769090 100769300 + 9.07 0.000 intron (NM_001367945, intron 1 of 25) intron (NM_001367945, intron 1 of 25) -81240 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr4-8764 chr4 187305392 187305602 + 9.07 0.000 non-coding (NR_038931, exon 4 of 5) non-coding (NR_038931, exon 4 of 5) -65151 NR_149103 105377602 Hs.582096 NR_149103 ENSG00000250042 LINC02514 - long intergenic non-protein coding RNA 2514 ncRNA chr6-4073 chr6 138804435 138804645 + 9.07 0.000 intron (NM_001195037, intron 1 of 20) L1M5|LINE|L1 8429 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr20-3661 chr20 11159845 11160055 + 9.07 0.000 Intergenic Intergenic 113433 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr1-6026 chr1 63108262 63108472 + 9.07 0.000 Intergenic Intergenic -95896 NR_146606 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr20-2225 chr20 62968176 62968386 + 9.07 0.000 3' UTR (NM_022082, exon 13 of 13) 3' UTR (NM_022082, exon 13 of 13) 15572 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr4-3564 chr4 794867 795077 + 9.07 0.000 intron (NM_006651, intron 2 of 3) intron (NM_006651, intron 2 of 3) -13124 NR_036511 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr6-6786 chr6 4045247 4045457 + 9.07 0.000 intron (NR_146785, intron 6 of 20) MER58B|DNA|hAT-Charlie 24052 NM_003913 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr18-1515 chr18 7133114 7133324 + 9.07 0.000 Intergenic Intergenic -15422 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr9-2877 chr9 130423580 130423790 + 9.07 0.000 intron (NM_001291815, intron 87 of 97) intron (NM_001291815, intron 87 of 97) -21022 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr4-4881 chr4 116263913 116264123 + 9.07 0.000 Intergenic HERVL-int|LTR|ERVL -35707 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr20-2059 chr20 9500584 9500794 + 9.07 0.000 Intergenic Intergenic -13669 NM_001199897 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chr12-4159 chr12 84977358 84977568 + 9.07 0.000 Intergenic L1ME2z|LINE|L1 58814 NM_001100917 144448 Hs.156962 NM_001100917 ENSG00000231738 TSPAN19 - tetraspanin 19 protein-coding chr4-2717 chr4 3977944 3978154 + 9.07 0.000 Intergenic LTR5A|LTR|ERVK -22621 NR_130740 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr8-4749 chr8 142625812 142626022 + 9.07 0.000 Intergenic Intergenic -11438 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr4-6194 chr4 48275245 48275455 + 9.07 0.000 Intergenic L2a|LINE|L2 -5512 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr14-5376 chr14 103876700 103876910 + 9.07 0.000 Intergenic AluJb|SINE|Alu 29084 NR_038436 145216 Hs.578091 NR_038436 ENSG00000258735 LINC00637 - long intergenic non-protein coding RNA 637 ncRNA chr3-5770 chr3 23302560 23302770 + 9.07 0.000 intron (NM_001370225, intron 3 of 5) MIR3|SINE|MIR 99338 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding KQ759759.1-2 KQ759759.1 48292 48502 + 9.07 0.000 NA NA NA NA chr3-6164 chr3 58143611 58143821 + 9.07 0.000 intron (NM_001164318, intron 32 of 45) intron (NM_001164318, intron 32 of 45) 26919 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr3-10079 chr3 108863334 108863544 + 9.07 0.000 Intergenic L2|LINE|L2 40653 NM_001317747 50852 Hs.138701 NM_016388 ENSG00000163519 TRAT1 HSPC062|TCRIM|TRIM|pp29/30 T cell receptor associated transmembrane adaptor 1 protein-coding chr15-4720 chr15 67523154 67523364 + 9.07 0.000 intron (NM_001143936, intron 1 of 1) intron (NM_001143936, intron 1 of 1) -1415 NR_040052 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr2-13904 chr2 181458430 181458640 + 9.07 0.000 intron (NM_000885, intron 2 of 27) intron (NM_000885, intron 2 of 27) 1149 NM_000885 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr1-2287 chr1 12184335 12184545 + 9.07 0.000 intron (NM_001066, intron 1 of 9) intron (NM_001066, intron 1 of 9) -7273 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr12-8012 chr12 112640898 112641108 + 9.07 0.000 intron (NM_001347952, intron 1 of 21) intron (NM_001347952, intron 1 of 21) 54173 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr15-1313 chr15 68055567 68055777 + 9.07 0.000 intron (NM_001320687, intron 1 of 14) intron (NM_001320687, intron 1 of 14) 1096 NM_001320687 8554 Hs.162458 NM_016166 ENSG00000033800 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT 1 protein-coding chr5-7428 chr5 29344270 29344480 + 9.07 0.000 Intergenic MER44B|DNA|TcMar-Tigger 51601 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA chr3-4896 chr3 183493774 183493984 + 9.07 0.000 intron (NM_130446, intron 5 of 6) intron (NM_130446, intron 5 of 6) 40065 NR_145763 109617007 NR_145763 ENSG00000199363 SNORA63E - small nucleolar RNA, H/ACA box 63E snoRNA chrX-1791 chrX 81253200 81253410 + 9.07 0.000 intron (NM_003022, intron 1 of 3) intron (NM_003022, intron 1 of 3) 51203 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr17-3672 chr17 9979208 9979418 + 9.07 0.000 intron (NM_201432, intron 3 of 13) intron (NM_201432, intron 3 of 13) -19818 NM_003644 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr1-4831 chr1 25089826 25090036 + 9.07 0.000 Intergenic Intergenic 66428 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr14-1354 chr14 102341704 102341914 + 9.07 0.000 exon (NM_018335, exon 8 of 8) exon (NM_018335, exon 8 of 8) 21081 NM_032630 51550 Hs.129634 NM_032630 ENSG00000100865 CINP - cyclin dependent kinase 2 interacting protein protein-coding chr8-2451 chr8 121164162 121164372 + 9.07 0.000 Intergenic Intergenic -352221 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr14-5199 chr14 95091120 95091330 + 9.07 0.000 exon (NM_177438, exon 25 of 27) exon (NM_177438, exon 25 of 27) 42278 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr8-3988 chr8 53252703 53252913 + 9.07 0.000 Intergenic Intergenic -1111 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr7-3477 chr7 2163266 2163476 + 9.07 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) 69574 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr16-1009 chr16 68539077 68539287 + 9.07 0.000 promoter-TSS (NR_130978) promoter-TSS (NR_130978) -31 NM_001305204 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr12-4186 chr12 94152531 94152741 + 9.07 0.000 intron (NM_005761, intron 1 of 30) intron (NM_005761, intron 1 of 30) 4059 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr12-4270 chr12 120224298 120224508 + 9.07 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 23112 NR_038924 100506649 Hs.569205 NR_038924 ENSG00000255857 PXN-AS1 EyeLinc4 PXN antisense RNA 1 ncRNA chr2-4763 chr2 23941067 23941277 + 9.07 0.000 intron (NM_181713, intron 1 of 6) intron (NM_181713, intron 1 of 6) 709 NM_181713 165324 Hs.591576 NM_181713 ENSG00000173960 UBXN2A UBXD4 UBX domain protein 2A protein-coding chr6-5177 chr6 129120801 129121011 + 9.07 0.000 intron (NM_000426, intron 4 of 64) intron (NM_000426, intron 4 of 64) 237765 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr16-2139 chr16 23679627 23679837 + 9.07 0.000 intron (NM_005030, intron 1 of 9) intron (NM_005030, intron 1 of 9) 843 NM_005030 5347 Hs.592049 NM_005030 ENSG00000166851 PLK1 PLK|STPK13 polo like kinase 1 protein-coding chr16-6178 chr16 25535083 25535293 + 9.07 0.000 Intergenic Intergenic -156771 NM_006040 9951 Hs.655275 NM_006040 ENSG00000182601 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate-glucosamine 3-sulfotransferase 4 protein-coding chr1-7881 chr1 112550930 112551140 + 9.07 0.000 intron (NM_017744, intron 12 of 14) intron (NM_017744, intron 12 of 14) 42070 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr2-10501 chr2 225920736 225920946 + 9.07 0.000 Intergenic Intergenic -221953 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr12-3642 chr12 102172299 102172509 + 9.07 0.000 intron (NR_135123, intron 4 of 4) intron (NR_135123, intron 4 of 4) 25429 NM_002674 5367 Hs.707990 NM_002674 ENSG00000183395 PMCH MCH|ppMCH pro-melanin concentrating hormone protein-coding chr18-1177 chr18 22831462 22831672 + 9.07 0.000 Intergenic Intergenic -44730 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr12-7181 chr12 49358551 49358761 + 9.07 0.000 Intergenic L3b|LINE|CR1 -8249 NM_001293286 65244 Hs.654826 NM_023071 ENSG00000123352 SPATS2 Nbla00526|P59SCR|SCR59|SPATA10 spermatogenesis associated serine rich 2 protein-coding chr16-4276 chr16 25300620 25300830 + 9.07 0.000 Intergenic Intergenic -42880 NM_001012981 342357 Hs.513451 NM_001012981 ENSG00000155592 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding chr3-8753 chr3 2131046 2131256 + 9.07 0.000 intron (NR_046555, intron 2 of 2) MIR|SINE|MIR 13090 NR_046555 100873976 Hs.611138 NR_046555 ENSG00000227588 CNTN4-AS2 - CNTN4 antisense RNA 2 ncRNA chr12-6924 chr12 25050819 25051029 + 9.07 0.000 intron (NM_001321724, intron 17 of 17) L1MB1|LINE|L1 -1304 NM_001366540 4033 Hs.124922 NM_006152 ENSG00000118308 LRMP JAW1 lymphoid restricted membrane protein protein-coding chr16-6198 chr16 27547103 27547313 + 9.07 0.000 intron (NM_001520, intron 1 of 36) L2|LINE|L2 2705 NM_001520 2975 Hs.371718 NM_001520 ENSG00000077235 GTF3C1 TFIIIC|TFIIIC220|TFIIICalpha general transcription factor IIIC subunit 1 protein-coding chr13-3565 chr13 25596252 25596462 + 9.07 0.000 intron (NM_016529, intron 24 of 36) L1ME2|LINE|L1 127583 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr8-4080 chr8 67253702 67253912 + 9.07 0.000 intron (NM_006421, intron 17 of 38) intron (NM_006421, intron 17 of 38) 89974 NM_006421 10565 Hs.656902 NM_006421 ENSG00000066777 ARFGEF1 ARFGEP1|BIG1|P200 ADP ribosylation factor guanine nucleotide exchange factor 1 protein-coding chr4-4886 chr4 117245781 117245991 + 9.07 0.000 Intergenic Intergenic 114753 NR_147151 105377389 Hs.129401 NR_147151 ENSG00000224932 LINC02262 - long intergenic non-protein coding RNA 2262 ncRNA chr3-4126 chr3 115520886 115521096 + 9.07 0.000 Intergenic MER89|LTR|ERV1 -102519 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr19-3902 chr19 41815564 41815774 + 9.07 0.000 Intergenic L1MD2|LINE|L1 19082 NR_102333 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr15-2796 chr15 36254402 36254612 + 9.07 0.000 Intergenic Intergenic -325119 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr3-6568 chr3 123317028 123317238 + 9.07 0.000 intron (NM_183357, intron 11 of 20) MARNA|DNA|TcMar-Mariner 99209 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chrX-1643 chrX 130746931 130747141 + 9.07 0.000 intron (NM_182314, intron 3 of 15) intron (NM_182314, intron 3 of 15) -55600 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr4-3299 chr4 151279469 151279679 + 9.07 0.000 intron (NM_183375, intron 1 of 4) intron (NM_183375, intron 1 of 4) 2401 NM_001353611 345062 Hs.651266 NM_183375 ENSG00000189099 PRSS48 ESSPL serine protease 48 protein-coding chr20-2978 chr20 36585575 36585785 + 9.07 0.000 intron (NM_001199535, intron 2 of 4) intron (NM_001199535, intron 2 of 4) 11126 NM_001199515 60436 Hs.632264 NM_021809 ENSG00000118707 TGIF2 - TGFB induced factor homeobox 2 protein-coding chrX-2537 chrX 98970258 98970468 + 9.07 0.000 Intergenic Intergenic -1405828 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr2-13795 chr2 173457578 173457788 + 9.07 0.000 Intergenic L2b|LINE|L2 102811 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr8-2076 chr8 125787384 125787594 + 9.07 0.000 Intergenic Intergenic 163708 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr20-2647 chr20 43849764 43849974 + 9.07 0.000 Intergenic Intergenic -44849 NR_134577 105372626 Hs.130555 NR_134577 ENSG00000233277 LINC01728 - long intergenic non-protein coding RNA 1728 ncRNA chr15-1112 chr15 85640126 85640336 + 9.07 0.000 intron (NM_007200, intron 9 of 36) MIR|SINE|MIR 20281 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chrX-3260 chrX 83414957 83415167 + 9.07 0.000 Intergenic L1MA3|LINE|L1 -93228 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr8-5124 chr8 68220572 68220782 + 9.07 0.000 intron (NM_024870, intron 38 of 39) intron (NM_024870, intron 38 of 39) -109696 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr6-7134 chr6 35763564 35763774 + 9.07 0.000 Intergenic MER4A1|LTR|ERV1 -12925 NR_104469 389383 Hs.259563 NM_207409 ENSG00000196748 CLPSL2 AAAL3045|C6orf126|UNQ3045|dJ510O8.5 colipase like 2 protein-coding chr2-7077 chr2 170013934 170014144 + 9.07 0.000 intron (NM_172070, intron 29 of 38) intron (NM_172070, intron 29 of 38) -164108 NR_045684 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr18-2029 chr18 45670564 45670774 + 9.07 0.000 intron (NM_007163, intron 16 of 19) AluJr|SINE|Alu -53512 NM_001146036 6563 Hs.101307 NM_015865 ENSG00000141469 SLC14A1 HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE solute carrier family 14 member 1 (Kidd blood group) protein-coding chr4-7295 chr4 53315275 53315485 + 9.07 0.000 intron (NM_152540, intron 2 of 8) intron (NM_152540, intron 2 of 8) 50681 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr17-4720 chr17 32559415 32559625 + 9.07 0.000 intron (NM_015194, intron 21 of 21) MER57B2|LTR|ERV1 72527 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr2-7176 chr2 205166817 205167027 + 9.07 0.000 intron (NM_205863, intron 11 of 21) intron (NM_205863, intron 11 of 21) -515578 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr12-7988 chr12 111398479 111398689 + 9.07 0.000 Intergenic MIRb|SINE|MIR -7364 NM_005475 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr9-6422 chr9 70392214 70392424 + 9.07 0.000 intron (NM_001206, intron 1 of 1) intron (NM_001206, intron 1 of 1) 22338 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr6-2170 chr6 26234031 26234241 + 9.07 0.000 TTS (NM_005320) TTS (NM_005320) 852 NM_005320 3007 Hs.136857 NM_005320 ENSG00000124575 HIST1H1D H1.3|H1D|H1F3|H1s-2 histone cluster 1 H1 family member d protein-coding chr5-6793 chr5 94241274 94241484 + 9.07 0.000 intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) -129680 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr3-10765 chr3 156916378 156916588 + 9.07 0.000 intron (NM_001004316, intron 3 of 12) L1PREC2|LINE|L1 90130 NM_001193283 389170 Hs.478048 NM_001004316 ENSG00000197980 LEKR1 - leucine, glutamate and lysine rich 1 protein-coding chr6-7198 chr6 39121350 39121560 + 9.07 0.000 Intergenic HERVH-int|LTR|ERV1 -6269 NM_001304793 55776 Hs.58382 NM_018322 ENSG00000112167 SAYSD1 C6orf64 SAYSVFN motif domain containing 1 protein-coding chr7-7003 chr7 122138489 122138699 + 9.07 0.000 intron (NM_005763, intron 1 of 23) MER44A|DNA|TcMar-Tigger 5655 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr7-6104 chr7 120254338 120254548 + 9.07 0.000 Intergenic THE1D|LTR|ERVL-MaLR -18732 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr13-4203 chr13 92067757 92067967 + 9.07 0.000 intron (NM_004466, intron 6 of 7) L1ME4a|LINE|L1 284345 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr9-6943 chr9 98021395 98021605 + 9.07 0.000 Intergenic Intergenic -35232 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr17-3955 chr17 62726140 62726350 + 9.07 0.000 intron (NM_001288780, intron 7 of 10) intron (NM_001288780, intron 7 of 10) 20039 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr12-3282 chr12 70255019 70255229 + 9.07 0.000 intron (NM_001199303, intron 1 of 15) intron (NM_001199303, intron 1 of 15) 11410 NM_001199303 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr21-750 chr21 42215589 42215799 + 9.07 0.000 promoter-TSS (NM_207629) promoter-TSS (NM_207629) -383 NM_207629 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr13-3596 chr13 28531304 28531514 + 9.07 0.000 Intergenic CpG -36281 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr2-11270 chr2 177669642 177669852 + 9.07 0.000 intron (NM_001077197, intron 18 of 20) intron (NM_001077197, intron 18 of 20) -3575 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA chr11-9789 chr11 69889464 69889674 + 9.07 0.000 Intergenic MIR|SINE|MIR -70153 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr2-6136 chr2 226187869 226188079 + 9.07 0.000 Intergenic Intergenic 45180 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr2-12174 chr2 39917282 39917492 + 9.07 0.000 promoter-TSS (NR_038441) promoter-TSS (NR_038441) -247 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr5-6190 chr5 61486476 61486686 + 9.07 0.000 intron (NM_020928, intron 2 of 13) L1PB4|LINE|L1 -151179 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr15-4922 chr15 77733851 77734061 + 9.07 0.000 intron (NM_001301192, intron 2 of 4) MIRb|SINE|MIR -13205 NM_001301197 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr12-4953 chr12 71900978 71901188 + 9.07 0.000 intron (NR_027449, intron 9 of 15) AluJr|SINE|Alu -37762 NM_173353 121278 Hs.736576 NM_173353 ENSG00000139287 TPH2 ADHD7|NTPH tryptophan hydroxylase 2 protein-coding chr17-5675 chr17 50559149 50559359 + 9.07 0.000 intron (NR_038439, intron 1 of 1) CpG -1461 NM_001256361 8913 Hs.591169 NM_018896 ENSG00000006283 CACNA1G Ca(V)T.1|Cav3.1|NBR13|SCA42|SCA42ND calcium voltage-gated channel subunit alpha1 G protein-coding chr3-6596 chr3 125430302 125430512 + 9.07 0.000 Intergenic Intergenic -55053 NM_001348428 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr9-6579 chr9 124512533 124512743 + 9.07 0.000 Intergenic Intergenic -5239 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr22-2725 chr22 38589157 38589367 + 9.07 0.000 intron (NM_001013647, intron 16 of 16) MLT1C|LTR|ERVL-MaLR 18762 NR_134627 105373031 Hs.144041 NR_134627 LOC105373031 - uncharacterized LOC105373031 ncRNA chr1-4578 chr1 93384746 93384956 + 9.07 0.000 Intergenic Intergenic 38944 NM_001938 1810 Hs.348418 NM_001938 ENSG00000117505 DR1 NC2|NC2-BETA|NC2B|NCB2 down-regulator of transcription 1 protein-coding chr10-6994 chr10 71549686 71549896 + 9.07 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -37871 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr15-2045 chr15 55685349 55685559 + 9.07 0.000 intron (NM_173814, intron 2 of 19) intron (NM_173814, intron 2 of 19) 57698 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chr5-6161 chr5 45534410 45534620 + 9.07 0.000 intron (NM_021072, intron 2 of 7) intron (NM_021072, intron 2 of 7) 161865 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr4-7641 chr4 84055111 84055321 + 9.07 0.000 intron (NR_125909, intron 7 of 8) MIR|SINE|MIR 243953 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr3-8456 chr3 122661446 122661656 + 9.07 0.000 Intergenic Intergenic -19288 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr6-8185 chr6 133127177 133127387 + 9.07 0.000 Intergenic Intergenic 39202 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr5-4149 chr5 91983734 91983944 + 9.07 0.000 Intergenic Intergenic -600522 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr1-9607 chr1 45316302 45316512 + 9.07 0.000 Intergenic HERVH-int|LTR|ERV1 -10488 NM_032756 84842 Hs.162717 NM_032756 ENSG00000186603 HPDL 4-HPPD-L|GLOXD1 4-hydroxyphenylpyruvate dioxygenase like protein-coding chr6-3035 chr6 54173241 54173451 + 9.07 0.000 intron (NM_001281746, intron 9 of 11) intron (NM_001281746, intron 9 of 11) 61903 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr14-4878 chr14 71508336 71508546 + 9.07 0.000 intron (NM_001284247, intron 1 of 23) intron (NM_001284247, intron 1 of 23) 20580 NR_027046 145474 Hs.658241 NR_027046 LOC145474 - uncharacterized LOC145474 ncRNA chr17-3407 chr17 4787305 4787515 + 9.07 0.000 Intergenic Intergenic -1046 NM_001144940 284013 Hs.122561 NM_182566 ENSG00000182853 VMO1 ERGA6350|PRO21055 vitelline membrane outer layer 1 homolog protein-coding chr1-6762 chr1 74340676 74340886 + 9.07 0.000 intron (NM_015978, intron 7 of 24) intron (NM_015978, intron 7 of 24) 105394 NM_015978 51086 Hs.480085 NM_015978 ENSG00000116783 TNNI3K CARK|CCDD TNNI3 interacting kinase protein-coding chrX-3521 chrX 48527211 48527421 + 9.07 0.000 intron (NM_006579, intron 4 of 4) intron (NM_006579, intron 4 of 4) 5508 NM_006579 10682 Hs.30619 NM_006579 ENSG00000147155 EBP CDPX2|CHO2|CPX|CPXD|MEND EBP cholestenol delta-isomerase protein-coding chr4-8297 chr4 143254438 143254648 + 9.07 0.000 Intergenic Intergenic 69626 NM_032557 84640 Hs.480848 NM_032557 ENSG00000170185 USP38 HP43.8KD ubiquitin specific peptidase 38 protein-coding chr9-6802 chr9 35415572 35415782 + 9.07 0.000 intron (NR_003582, intron 2 of 10) L1PB3|LINE|L1 8922 NR_003582 158381 Hs.575661 NR_003581 ENSG00000179766 ATP8B5P FetA ATPase phospholipid transporting 8B5, pseudogene pseudo chr22-1912 chr22 45967697 45967907 + 9.07 0.000 intron (NM_058238, intron 1 of 3) intron (NM_058238, intron 1 of 3) 9360 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr4-4983 chr4 133681641 133681851 + 9.07 0.000 Intergenic L1M2|LINE|L1 520043 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr14-1958 chr14 33679237 33679447 + 9.07 0.000 intron (NM_001165893, intron 5 of 10) intron (NM_001165893, intron 5 of 10) -29595 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr17-1759 chr17 17668569 17668779 + 9.07 0.000 Intergenic L2a|LINE|L2 9014 NR_131243 105371564 Hs.369680 NR_131243 ENSG00000223979 SMCR2 TCONS_00025215 Smith-Magenis syndrome chromosome region, candidate 2 ncRNA chr14-1604 chr14 99969579 99969789 + 9.07 0.000 Intergenic Intergenic -1738 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr11-3288 chr11 85759906 85760116 + 9.07 0.000 intron (NM_001365826, intron 1 of 18) MLT1I|LTR|ERVL-MaLR -1942 NM_001162951 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr11-9839 chr11 72563350 72563560 + 9.07 0.000 Intergenic L1M5|LINE|L1 -7201 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr2-6021 chr2 98930137 98930347 + 9.07 0.000 intron (NM_207362, intron 1 of 9) LTR102_Mam|LTR|ERVL 5983 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr6-2836 chr6 168994367 168994577 + 9.07 0.000 Intergenic Intergenic -30090 NR_136250 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr22-3359 chr22 26471877 26472087 + 9.07 0.000 intron (NR_146314, intron 6 of 14) intron (NR_146314, intron 6 of 14) 7506 NR_073136 89781 Hs.474436 NM_022081 ENSG00000100099 HPS4 BLOC3S2|LE HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 protein-coding chr21-831 chr21 43916381 43916591 + 9.07 0.000 promoter-TSS (NM_001369880) promoter-TSS (NM_001369880) -302 NM_001369880 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr7-3597 chr7 28068820 28069030 + 9.07 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -111532 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA KI270589.1-4 KI270589.1 44158 44368 + 9.07 0.000 NA NA NA NA chr18-1632 chr18 52337383 52337593 + 9.07 0.000 Intergenic Intergenic -2709 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr7-2934 chr7 137847007 137847217 + 9.07 0.000 promoter-TSS (NM_001321709) promoter-TSS (NM_001321709) -248 NM_001321708 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr9-1714 chr9 109001418 109001628 + 9.07 0.000 intron (NM_003798, intron 1 of 18) MLT1F1|LTR|ERVL-MaLR 11976 NM_001286974 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr11-5340 chr11 62274350 62274560 + 9.07 0.000 Intergenic HERVH48-int|LTR|ERV1 4297 NM_002411 4250 Hs.46452 NM_002411 ENSG00000110484 SCGB2A2 MGB1|UGB2 secretoglobin family 2A member 2 protein-coding chr2-8565 chr2 135224426 135224636 + 9.07 0.000 intron (NM_001286568, intron 14 of 20) intron (NM_001286568, intron 14 of 20) 87903 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr17-7028 chr17 59219422 59219632 + 9.07 0.000 promoter-TSS (NM_001165994) promoter-TSS (NM_001165994) -984 NM_182569 284161 Hs.631744 NM_182569 ENSG00000153982 GDPD1 GDE4 glycerophosphodiester phosphodiesterase domain containing 1 protein-coding chr5-5543 chr5 147098772 147098982 + 9.07 0.000 Intergenic Intergenic -17357 NM_001271899 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr9-5305 chr9 85879822 85880032 + 9.07 0.000 Intergenic HERVH-int|LTR|ERV1 -61215 NM_001321881 60560 Hs.436098 NM_021929 ENSG00000135040 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding chr17-5203 chr17 15153417 15153627 + 9.07 0.000 Intergenic LTR33|LTR|ERVL -47335 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr1-12721 chr1 56404982 56405192 + 9.07 0.000 Intergenic Intergenic -9876 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr8-7073 chr8 117266528 117266738 + 9.07 0.000 Intergenic THE1D|LTR|ERVL-MaLR 131638 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr9-5803 chr9 128972467 128972677 + 9.07 0.000 intron (NM_015354, intron 11 of 43) L1MC1|LINE|L1 -24839 NM_014908 22845 Hs.531563 NM_014908 ENSG00000175283 DOLK CDG1M|DK|DK1|SEC59|TMEM15 dolichol kinase protein-coding chr14-4971 chr14 75325096 75325306 + 9.07 0.000 Intergenic Intergenic 30797 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr4-2304 chr4 56995378 56995588 + 9.07 0.000 intron (NM_001303269, intron 7 of 25) intron (NM_001303269, intron 7 of 25) 16587 NM_000938 5431 Hs.602757 NM_000938 ENSG00000047315 POLR2B POL2RB|RPB2|hRPB140 RNA polymerase II subunit B protein-coding chr2-6387 chr2 118203010 118203220 + 9.07 0.000 Intergenic Intergenic -16729 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr12-6384 chr12 68462688 68462898 + 9.07 0.000 Intergenic MER4B-int|LTR|ERV1 -11309 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr2-6038 chr2 117942068 117942278 + 9.07 0.000 intron (NM_019044, intron 18 of 23) intron (NM_019044, intron 18 of 23) 71897 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr5-8442 chr5 128935551 128935761 + 9.07 0.000 Intergenic L1MEc|LINE|L1 -29471 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr2-8933 chr2 185484906 185485116 + 9.07 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 253708 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr11-4024 chr11 9087626 9087836 + 9.07 0.000 intron (NM_001367977, intron 2 of 22) intron (NM_001367977, intron 2 of 22) 2648 NR_049874 100847015 NR_049874 ENSG00000264984 MIR5691 - microRNA 5691 ncRNA chr16-6564 chr16 65790271 65790481 + 9.07 0.000 Intergenic Intergenic -214076 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr22-1095 chr22 33579536 33579746 + 9.07 0.000 intron (NM_133642, intron 5 of 14) intron (NM_133642, intron 5 of 14) 125279 NR_145833 109616998 NR_145833 ENSG00000253007 SNORA50B - small nucleolar RNA, H/ACA box 50B snoRNA chr9-3569 chr9 72322355 72322565 + 9.07 0.000 intron (NR_110952, intron 2 of 4) intron (NR_110952, intron 2 of 4) 17024 NR_110952 100507540 Hs.54957 NR_110952 ENSG00000225434 LINC01504 - long intergenic non-protein coding RNA 1504 ncRNA chr6-2402 chr6 151045682 151045892 + 9.07 0.000 intron (NM_001350486, intron 26 of 27) intron (NM_001350486, intron 26 of 27) 38779 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr20-1879 chr20 45015296 45015506 + 9.07 0.000 intron (NM_001352385, intron 9 of 11) intron (NM_001352385, intron 9 of 11) 48889 NR_147974 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding chr3-4142 chr3 122698330 122698540 + 9.07 0.000 intron (NM_017554, intron 5 of 16) intron (NM_017554, intron 5 of 16) 17596 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chrX-1902 chrX 137177987 137178197 + 9.07 0.000 Intergenic L2a|LINE|L2 -146418 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr5-3451 chr5 159881520 159881730 + 9.07 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -10241 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr20-4458 chr20 62296097 62296307 + 9.07 0.000 TTS (NM_001278649) TTS (NM_001278649) -6694 NM_001281438 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr2-9095 chr2 204260356 204260566 + 9.07 0.000 Intergenic Intergenic -285014 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr15-4830 chr15 73626094 73626304 + 9.07 0.000 intron (NM_012428, intron 1 of 8) intron (NM_012428, intron 1 of 8) 7190 NM_017455 27020 Hs.744867 NM_012428 ENSG00000156642 NPTN GP55|GP65|SDFR1|SDR1|np55|np65 neuroplastin protein-coding chr16-2942 chr16 3679633 3679843 + 9.07 0.000 exon (NM_016292, exon 5 of 18) exon (NM_016292, exon 5 of 18) 25034 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr20-3608 chr20 5593918 5594128 + 9.07 0.000 intron (NM_019593, intron 3 of 19) intron (NM_019593, intron 3 of 19) 16983 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr11-10703 chr11 130216007 130216217 + 9.07 0.000 Intergenic Intergenic 56330 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr5-2449 chr5 133310829 133311039 + 9.07 0.000 intron (NM_015082, intron 6 of 15) intron (NM_015082, intron 6 of 15) 116772 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr2-4362 chr2 10390457 10390667 + 9.07 0.000 intron (NM_001258359, intron 1 of 4) Tigger19a|DNA|TcMar-Tigger 21798 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr11-8001 chr11 12768092 12768302 + 9.07 0.000 intron (NM_021961, intron 3 of 12) MIR|SINE|MIR 93776 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr14-2107 chr14 74237056 74237266 + 9.07 0.000 Intergenic AluSz|SINE|Alu -2288 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr1-4773 chr1 11753776 11753986 + 9.07 0.000 Intergenic Intergenic -8312 NM_001010881 284498 Hs.585415 NM_001010881 C1orf167 - chromosome 1 open reading frame 167 protein-coding chr3-8239 chr3 49083115 49083325 + 9.07 0.000 intron (NM_001320584, intron 1 of 9) AluSp|SINE|Alu 10412 NM_001320582 54870 Hs.297389 NM_017730 ENSG00000198218 QRICH1 AB-DIP|VERBRAS glutamine rich 1 protein-coding chr4-2269 chr4 176259713 176259923 + 9.07 0.000 intron (NM_080874, intron 1 of 6) intron (NM_080874, intron 1 of 6) 9404 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chr16-3057 chr16 56964954 56965164 + 9.07 0.000 intron (NM_001286085, intron 2 of 14) AluJb|SINE|Alu 3109 NM_000078 1071 Hs.89538 NM_000078 ENSG00000087237 CETP BPIFF|HDLCQ10 cholesteryl ester transfer protein protein-coding chr11-7353 chr11 67092179 67092389 + 9.07 0.000 Intergenic L1PA8|LINE|L1 26064 NR_160735 107984341 NR_160735 LOC107984341 - uncharacterized LOC107984341 ncRNA chr1-8539 chr1 158146281 158146491 + 9.07 0.000 Intergenic MER70-int|LTR|ERVL -5746 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr16-6343 chr16 50290103 50290313 + 9.07 0.000 intron (NM_001114, intron 2 of 25) intron (NM_001114, intron 2 of 25) -2408 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chrX-3018 chrX 66369015 66369225 + 9.07 0.000 Intergenic L1MB8|LINE|L1 201370 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr2-4601 chr2 113175066 113175276 + 9.07 0.000 intron (NM_012455, intron 1 of 16) intron (NM_012455, intron 1 of 16) 1200 NM_012455 23550 Hs.516306 NM_012455 ENSG00000125637 PSD4 EFA6B|TIC pleckstrin and Sec7 domain containing 4 protein-coding chr14-1113 chr14 74923075 74923285 + 9.07 0.000 promoter-TSS (NM_031464) promoter-TSS (NM_031464) 80 NM_001370256 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding chr17-2652 chr17 20798700 20798910 + 9.07 0.000 Intergenic AluSx|SINE|Alu -69722 NR_160710 440416 Hs.661076 NR_104185 ENSG00000233098 CCDC144NL-AS1 - CCDC144NL antisense RNA 1 ncRNA chrX-5255 chrX 138369668 138369878 + 9.07 0.000 Intergenic MIR3|SINE|MIR 298020 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr5-8788 chr5 149227224 149227434 + 9.07 0.000 intron (NM_001370418, intron 7 of 18) intron (NM_001370418, intron 7 of 18) -44509 NM_001323063 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr17-3799 chr17 40092081 40092291 + 9.07 0.000 TTS (NM_021724) TTS (NM_021724) 8403 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|REVERBA|REVERBalpha|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr2-2468 chr2 108098772 108098982 + 9.07 0.000 Intergenic L1MB5|LINE|L1 -46122 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA chr20-1153 chr20 50655067 50655277 + 9.07 0.000 intron (NR_111906, intron 2 of 2) intron (NR_111906, intron 2 of 2) 9701 NR_111906 100506175 Hs.658270 NR_111906 ENSG00000234693 LOC100506175 - uncharacterized LOC100506175 ncRNA chr10-5872 chr10 115624425 115624635 + 9.07 0.000 intron (NM_207303, intron 26 of 28) intron (NM_207303, intron 26 of 28) 531165 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr3-3991 chr3 57082211 57082421 + 9.07 0.000 Intergenic Intergenic -3048 NM_001128615 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr10-4487 chr10 80584716 80584926 + 9.07 0.000 intron (NM_207372, intron 3 of 6) HAL1|LINE|L1 44002 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr21-589 chr21 43375700 43375910 + 9.07 0.000 Intergenic MSTB2|LTR|ERVL-MaLR -13456 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr2-7954 chr2 62363359 62363569 + 9.07 0.000 Intergenic Intergenic 142731 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr8-4792 chr8 144584225 144584435 + 9.07 0.000 intron (NM_025251, intron 1 of 10) L1M5|LINE|L1 21365 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr18-3385 chr18 59570031 59570241 + 9.07 0.000 intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) 127287 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr1-10150 chr1 107858501 107858711 + 9.07 0.000 intron (NM_006113, intron 2 of 26) MER1B|DNA|hAT-Charlie -38617 NR_107006 102465839 NR_107006 ENSG00000275455 MIR7852 hsa-mir-7852 microRNA 7852 ncRNA chr13-4146 chr13 84842285 84842495 + 9.07 0.000 Intergenic AluJo|SINE|Alu 58736 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr7-5337 chr7 28404702 28404912 + 9.07 0.000 intron (NM_182899, intron 1 of 9) intron (NM_182899, intron 1 of 9) -7711 NM_182898 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr16-3410 chr16 84963817 84964027 + 9.07 0.000 Intergenic Intergenic 47613 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr11-8486 chr11 118846811 118847021 + 9.07 0.000 Intergenic AluJr|SINE|Alu -36976 NM_001716 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr8-5098 chr8 55494509 55494719 + 9.07 0.000 intron (NM_052898, intron 2 of 2) MER52D|LTR|ERV1 26364 NR_134323 105375843 Hs.662416 NR_134323 ENSG00000254357 LOC105375843 - uncharacterized LOC105375843 ncRNA chr15-3012 chr15 56128295 56128505 + 9.07 0.000 intron (NM_001370561, intron 7 of 11) L1M4|LINE|L1 61532 NM_001368074 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr13-3879 chr13 51721556 51721766 + 9.07 0.000 intron (NM_052950, intron 5 of 11) intron (NM_052950, intron 5 of 11) 82501 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr2-9919 chr2 235659217 235659427 + 9.07 0.000 intron (NM_001037131, intron 1 of 17) MIR|SINE|MIR -141401 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr21-559 chr21 44040603 44040813 + 9.07 0.000 intron (NM_003274, intron 3 of 22) AluJb|SINE|Alu 28399 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr5-7731 chr5 59380537 59380747 + 9.07 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) -23672 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-11320 chr2 198316712 198316922 + 9.07 0.000 intron (NR_110267, intron 2 of 2) intron (NR_110267, intron 2 of 2) 58280 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2-5329 chr2 84493694 84493904 + 9.07 0.000 Intergenic Intergenic -22656 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chr10-7715 chr10 30714464 30714674 + 9.07 0.000 intron (NR_036438, intron 9 of 9) AluJo|SINE|Alu -8650 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr2-8853 chr2 174154334 174154544 + 9.07 0.000 intron (NM_001011708, intron 3 of 9) intron (NM_001011708, intron 3 of 9) 94093 NM_001011708 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr6-3440 chr6 138821448 138821658 + 9.07 0.000 intron (NM_001077706, intron 4 of 21) intron (NM_001077706, intron 4 of 21) 25442 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr17-3053 chr17 80427009 80427219 + 9.07 0.000 intron (NR_148043, intron 5 of 5) intron (NR_148043, intron 5 of 5) 7696 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr1-9226 chr1 22808521 22808731 + 9.07 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 54600 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr20-2358 chr20 15703427 15703637 + 9.07 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 219782 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr2-5490 chr2 136425747 136425957 + 9.07 0.000 Intergenic Intergenic -307697 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr9-7900 chr9 88476857 88477067 + 9.07 0.000 3' UTR (NM_006717, exon 6 of 6) 3' UTR (NM_006717, exon 6 of 6) -58139 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr12-2990 chr12 120363380 120363590 + 9.07 0.000 intron (NM_002442, intron 5 of 14) intron (NM_002442, intron 5 of 14) 5679 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chr17-2545 chr17 39607151 39607361 + 9.07 0.000 intron (NM_006160, intron 1 of 1) CpG 664 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr9-6866 chr9 80730467 80730677 + 9.07 0.000 Intergenic L1M2a|LINE|L1 755549 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr5-8714 chr5 143174886 143175096 + 9.07 0.000 intron (NM_001349547, intron 20 of 21) intron (NM_001349547, intron 20 of 21) -17509 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr7-2881 chr7 127393302 127393512 + 9.07 0.000 promoter-TSS (NM_176814) promoter-TSS (NM_176814) -699 NM_176814 168850 Hs.159006 NM_176814 ENSG00000048405 ZNF800 - zinc finger protein 800 protein-coding chrX-3945 chrX 10635904 10636114 + 9.07 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) -15424 NM_033289 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr20-3338 chr20 24701246 24701456 + 9.07 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 231390 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr18-978 chr18 80160166 80160376 + 9.07 0.000 exon (NM_032510, exon 3 of 3) exon (NM_032510, exon 3 of 3) 12347 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr18-2247 chr18 69966626 69966836 + 9.07 0.000 Intergenic Intergenic -9932 NM_006566 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr6-2737 chr6 81768254 81768464 + 9.07 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -15678 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr15-4588 chr15 59676128 59676338 + 9.07 0.000 intron (NM_001368060, intron 4 of 8) AluJb|SINE|Alu 12693 NM_001320675 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr2-9833 chr2 157304758 157304968 + 9.07 0.000 intron (NM_001329868, intron 8 of 10) intron (NM_001329868, intron 8 of 10) 20961 NM_020711 57471 Hs.443894 NM_020711 ENSG00000136541 ERMN JN|KIAA1189 ermin protein-coding chr1-7809 chr1 53799706 53799916 + 9.07 0.000 intron (NR_033142, intron 10 of 16) intron (NR_033142, intron 10 of 16) 38485 NM_001168551 55706 Hs.476525 NM_018087 ENSG00000058804 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding chr6-2190 chr6 36292450 36292660 + 9.07 0.000 intron (NM_173676, intron 2 of 7) intron (NM_173676, intron 2 of 7) 22095 NM_001145717 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr2-8063 chr2 73102995 73103205 + 9.07 0.000 intron (NM_001371272, intron 1 of 5) intron (NM_001371272, intron 1 of 5) 9848 NM_001371272 chr19-3594 chr19 49466924 49467134 + 9.07 0.000 intron (NM_001145396, intron 13 of 15) AluJr|SINE|Alu -7186 NM_001278637 2323 Hs.428 NM_001459 ENSG00000090554 FLT3LG FL|FLG3L|FLT3L fms related tyrosine kinase 3 ligand protein-coding chr10-2952 chr10 35300135 35300345 + 9.07 0.000 intron (NM_181698, intron 3 of 11) L1ME1|LINE|L1 -36269 NM_145012 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr1-6980 chr1 162873892 162874102 + 9.07 0.000 Intergenic Intergenic -5182 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr16-5339 chr16 82600261 82600471 + 9.07 0.000 Intergenic Intergenic -26603 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr21-1490 chr21 39072491 39072701 + 9.07 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -94822 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chrX-4807 chrX 100244095 100244305 + 9.07 0.000 Intergenic Intergenic 166073 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-5295 chr8 142490453 142490663 + 9.07 0.000 intron (NM_001702, intron 16 of 30) intron (NM_001702, intron 16 of 30) 40909 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr1-9384 chr1 30906851 30907061 + 9.07 0.000 intron (NM_014654, intron 1 of 4) intron (NM_014654, intron 1 of 4) 1802 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr20-2520 chr20 34570963 34571173 + 9.07 0.000 intron (NM_080476, intron 11 of 11) MIRb|SINE|MIR 12350 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr2-3495 chr2 202115701 202115911 + 9.07 0.000 non-coding (NR_135244, exon 2 of 4) non-coding (NR_135244, exon 2 of 4) 1252 NR_135243 729224 Hs.623895 NR_135243 KIAA2012-AS1 - KIAA2012 antisense RNA 1 ncRNA chr11-3754 chr11 45291032 45291242 + 9.07 0.000 Intergenic Intergenic -4796 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr2-14306 chr2 217115810 217116020 + 9.07 0.000 Intergenic Intergenic -166818 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr4-2507 chr4 26809471 26809681 + 9.07 0.000 Intergenic LTR16C|LTR|ERVL 50668 NR_134675 105374546 Hs.548859 NR_134673 STIM2-AS1 - STIM2 antisense RNA 1 ncRNA chr21-514 chr21 34912310 34912520 + 9.07 0.000 intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) -23716 NM_001122607 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr8-3933 chr8 42666902 42667112 + 9.07 0.000 Intergenic LTR81A|LTR|Gypsy -30359 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr1-3621 chr1 43531631 43531841 + 9.07 0.000 intron (NM_002840, intron 1 of 33) CpG 853 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr17-4273 chr17 67359937 67360147 + 9.07 0.000 intron (NM_002816, intron 1 of 10) MIR3|SINE|MIR 6535 NM_174871 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr17-4387 chr17 27884281 27884491 + 9.07 0.000 intron (NM_001076680, intron 1 of 3) intron (NM_001076680, intron 1 of 3) 8979 NM_001076680 201229 Hs.687951 NM_001076680 ENSG00000232859 LYRM9 C17orf108|HSD24 LYR motif containing 9 protein-coding chr17-4879 chr17 67360521 67360731 + 9.07 0.000 intron (NM_002816, intron 1 of 10) intron (NM_002816, intron 1 of 10) 5951 NM_174871 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr6-3329 chr6 1103976 1104186 + 9.07 0.000 Intergenic Intergenic -2749 NR_027116 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr18-947 chr18 9742614 9742824 + 9.07 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 34418 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr8-5376 chr8 22790313 22790523 + 9.07 0.000 intron (NM_001363233, intron 4 of 6) L2c|LINE|L2 -87554 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr10-6063 chr10 129420547 129420757 + 9.07 0.000 Intergenic AluSx|SINE|Alu -46589 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr4-3671 chr4 39086014 39086224 + 9.07 0.000 intron (NM_199039, intron 3 of 9) intron (NM_199039, intron 3 of 9) 23887 NM_199039 51088 Hs.272251 NM_015990 ENSG00000109790 KLHL5 - kelch like family member 5 protein-coding chr7-2590 chr7 132390861 132391071 + 9.07 0.000 intron (NM_001105543, intron 3 of 3) intron (NM_001105543, intron 3 of 3) 130105 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr6-7856 chr6 105824968 105825178 + 9.07 0.000 Intergenic Intergenic -261263 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr10-6967 chr10 67901026 67901236 + 9.07 0.000 intron (NM_001142498, intron 3 of 7) intron (NM_001142498, intron 3 of 7) 9729 NM_001314049 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr3-6439 chr3 103448002 103448212 + 9.07 0.000 Intergenic L1M1|LINE|L1 76009 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr17-4459 chr17 56020283 56020493 + 9.07 0.000 Intergenic Intergenic -133087 NM_001370326 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr7-9672 chr7 152564525 152564735 + 9.07 0.000 Intergenic Intergenic 100506 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA chr2-10270 chr2 125491292 125491502 + 9.07 0.000 Intergenic L1PB1|LINE|L1 626588 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr9-6322 chr9 138024922 138025132 + 9.07 0.000 exon (NM_000718, exon 20 of 46) exon (NM_000718, exon 20 of 46) 20044 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chr15-1570 chr15 71752664 71752874 + 9.07 0.000 intron (NM_001286429, intron 8 of 11) intron (NM_001286429, intron 8 of 11) -57785 NM_016346 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding chr3-3240 chr3 41217269 41217479 + 9.07 0.000 intron (NM_001904, intron 1 of 14) intron (NM_001904, intron 1 of 14) 17869 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr11-5239 chr11 24235081 24235291 + 9.07 0.000 Intergenic L1P4a|LINE|L1 -261867 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr9-6172 chr9 79952573 79952783 + 9.07 0.000 intron (NR_121213, intron 1 of 2) intron (NR_121213, intron 1 of 2) -22345 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr10-7570 chr10 17424391 17424601 + 9.07 0.000 intron (NM_001004470, intron 2 of 7) intron (NM_001004470, intron 2 of 7) 30099 NM_001004470 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr2-9578 chr2 240857795 240858005 + 9.07 0.000 Intergenic Intergenic -10924 NM_000030 189 Hs.144567 NM_000030 ENSG00000172482 AGXT AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6 alanine--glyoxylate and serine--pyruvate aminotransferase protein-coding chr5-9151 chr5 176812194 176812404 + 9.07 0.000 intron (NM_133369, intron 1 of 14) intron (NM_133369, intron 1 of 14) 1740 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 netrin receptor A protein-coding chr1-8831 chr1 2973149 2973359 + 9.07 0.000 Intergenic Intergenic -48213 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr1-14289 chr1 38212459 38212669 + 9.07 0.000 intron (NR_038928, intron 1 of 3) L2c|LINE|L2 2203 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA chr10-4329 chr10 26415403 26415613 + 9.07 0.000 Intergenic MIRc|SINE|MIR -22833 NM_019043 54518 Hs.310421 NM_019043 ENSG00000077420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta precursor protein binding family B member 1 interacting protein protein-coding chr4-8434 chr4 153792872 153793082 + 9.07 0.000 Intergenic CpG -3894 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr2-14046 chr2 195277496 195277706 + 9.07 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -379357 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr6-3886 chr6 56911348 56911558 + 9.07 0.000 intron (NM_001144769, intron 2 of 96) intron (NM_001144769, intron 2 of 96) 43377 NM_001144769 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr8-1877 chr8 22237322 22237532 + 9.07 0.000 Intergenic L2a|LINE|L2 -5075 NM_001363312 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr1-7223 chr1 223665845 223666055 + 9.07 0.000 promoter-TSS (NM_001143962) promoter-TSS (NM_001143962) -249 NM_001143962 388743 Hs.291487 NM_001143962 ENSG00000203697 CAPN8 nCL-2 calpain 8 protein-coding chr17-5083 chr17 4379013 4379223 + 9.07 0.000 Intergenic Intergenic -12444 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr3-6796 chr3 144304090 144304300 + 9.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR 331114 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr16-3395 chr16 69770658 69770868 + 9.07 0.000 intron (NM_001270455, intron 1 of 8) MER21B|LTR|ERVL 8431 NM_007014 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr12-3457 chr12 116696486 116696696 + 9.07 0.000 Intergenic L2a|LINE|L2 41478 NM_001353625 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr7-6364 chr7 150804327 150804537 + 9.07 0.000 exon (NM_018487, exon 6 of 7) exon (NM_018487, exon 6 of 7) -3072 NM_014020 28959 Hs.647090 NM_014020 ENSG00000106565 TMEM176B LR8|MS4B2 transmembrane protein 176B protein-coding chr19-2310 chr19 12880691 12880901 + 9.07 0.000 intron (NM_001375, intron 3 of 5) intron (NM_001375, intron 3 of 5) 653 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr4-3130 chr4 171137340 171137550 + 9.07 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -48739 NR_106730 102466953 NR_106730 ENSG00000278502 MIR6082 hsa-mir-6082 microRNA 6082 ncRNA chr8-2060 chr8 121724552 121724762 + 9.07 0.000 Intergenic Intergenic -83217 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr7-7545 chr7 113246859 113247069 + 9.07 0.000 Intergenic L2c|LINE|L2 -128382 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding chr8-1847 chr8 144112254 144112464 + 9.07 0.000 intron (NM_001316309, intron 14 of 23) intron (NM_001316309, intron 14 of 23) 4620 NM_001316309 340390 Hs.98723 NM_032529 ENSG00000179698 WDR97 KIAA1875 WD repeat domain 97 protein-coding chr3-2468 chr3 119034748 119034958 + 9.07 0.000 promoter-TSS (NM_001353318) promoter-TSS (NM_001353318) -7 NM_001353325 152404 Hs.112873 NM_152538 ENSG00000144847 IGSF11 BT-IgSF|CT119|CXADRL1|Igsf13|VSIG3 immunoglobulin superfamily member 11 protein-coding chr16-6316 chr16 48448153 48448363 + 9.07 0.000 Intergenic Intergenic -62845 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr6-3369 chr6 37794984 37795194 + 9.07 0.000 Intergenic L2b|LINE|L2 -24638 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr3-4091 chr3 104032210 104032420 + 9.07 0.000 Intergenic L1PA17|LINE|L1 -508199 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr14-1584 chr14 89000738 89000948 + 9.07 0.000 Intergenic Intergenic 176192 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr12-4255 chr12 114662599 114662809 + 9.07 0.000 Intergenic Intergenic 21471 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr17-8145 chr17 59439377 59439587 + 9.07 0.000 intron (NR_110813, intron 2 of 2) intron (NR_110813, intron 2 of 2) 73399 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chr15-2619 chr15 66575093 66575303 + 9.07 0.000 Intergenic Intergenic -6992 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr5-2745 chr5 138070432 138070642 + 9.07 0.000 Intergenic SVA_D|Retroposon|SVA -13355 NM_058244 7478 Hs.591274 NM_031933 ENSG00000061492 WNT8A WNT8D Wnt family member 8A protein-coding chr11-2635 chr11 33530913 33531123 + 9.07 0.000 intron (NM_012194, intron 1 of 20) intron (NM_012194, intron 1 of 20) 154910 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr3-8633 chr3 171809163 171809373 + 9.07 0.000 intron (NM_002662, intron 1 of 26) intron (NM_002662, intron 1 of 26) 1215 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr3-2326 chr3 130209616 130209826 + 9.07 0.000 Intergenic L1PB1|LINE|L1 -3099 NR_027898 646300 Hs.170475 NR_027898 COL6A4P2 COL6A4 collagen type VI alpha 4 pseudogene 2 pseudo chr3-5053 chr3 39498249 39498459 + 9.07 0.000 intron (NR_103506, intron 2 of 2) AluSg|SINE|Alu -3712 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr7-5493 chr7 43310049 43310259 + 9.07 0.000 intron (NM_001287059, intron 2 of 27) intron (NM_001287059, intron 2 of 27) 159259 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr5-9038 chr5 168873101 168873311 + 9.07 0.000 intron (NM_003062, intron 5 of 35) intron (NM_003062, intron 5 of 35) -104951 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr6-5462 chr6 159372745 159372955 + 9.07 0.000 Intergenic Intergenic -10681 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA chr12-4871 chr12 62518842 62519052 + 9.07 0.000 intron (NM_001278469, intron 8 of 35) intron (NM_001278469, intron 8 of 35) 52121 NM_001278470 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr6-6496 chr6 117661190 117661400 + 9.07 0.000 Intergenic HERVH-int|LTR|ERV1 13989 NR_110854 101927919 Hs.467500 NR_110854 LOC101927919 - uncharacterized LOC101927919 ncRNA chr17-5370 chr17 31088219 31088429 + 9.07 0.000 Intergenic Intergenic 6101 NR_039886 100616266 NR_039886 ENSG00000265444 MIR4733 - microRNA 4733 ncRNA chr5-3863 chr5 135456413 135456623 + 9.07 0.000 Intergenic Intergenic -4167 NM_001099221 497189 Hs.552091 NM_001099221 ENSG00000255833 TIFAB - TIFA inhibitor protein-coding chr3-6753 chr3 141071009 141071219 + 9.07 0.000 intron (NM_080862, intron 2 of 2) intron (NM_080862, intron 2 of 2) 19767 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr2-13982 chr2 189896976 189897186 + 9.07 0.000 Intergenic MIR|SINE|MIR 112631 NM_001321045 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr11-7765 chr11 82599966 82600176 + 9.07 0.000 Intergenic L2b|LINE|L2 133793 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr6-5721 chr6 142336373 142336583 + 9.07 0.000 intron (NM_198569, intron 2 of 24) intron (NM_198569, intron 2 of 24) 34471 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr9-8715 chr9 131703514 131703724 + 9.07 0.000 intron (NM_001304275, intron 1 of 23) MIR|SINE|MIR 6223 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr1-9486 chr1 36809811 36810021 + 9.07 0.000 intron (NM_000831, intron 13 of 15) intron (NM_000831, intron 13 of 15) 224599 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr17-4664 chr17 19709079 19709289 + 9.07 0.000 intron (NR_135625, intron 5 of 15) intron (NR_135625, intron 5 of 15) 7400 NM_152908 146802 Hs.126830 NM_152908 ENSG00000180638 SLC47A2 MATE2|MATE2-B|MATE2-K|MATE2K solute carrier family 47 member 2 protein-coding chr15-1549 chr15 67946596 67946806 + 9.07 0.000 Intergenic Intergenic -106656 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr17-4625 chr17 8029165 8029375 + 9.07 0.000 Intergenic Intergenic -9770 NM_001039130 247 Hs.111256 NM_001141 ENSG00000179593 ALOX15B 15-LOX-2 arachidonate 15-lipoxygenase type B protein-coding chr3-4667 chr3 42017576 42017786 + 9.07 0.000 Intergenic Intergenic -55578 NR_136342 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr1-7054 chr1 180156755 180156965 + 9.07 0.000 intron (NM_002826, intron 1 of 11) intron (NM_002826, intron 1 of 11) 1991 NM_002826 5768 Hs.719176 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr1-6957 chr1 156679204 156679414 + 9.07 0.000 Intergenic AluSx1|SINE|Alu -1902 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr8-6769 chr8 92323893 92324103 + 9.07 0.000 Intergenic L1ME3B|LINE|L1 -220613 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr14-2868 chr14 32560333 32560543 + 9.07 0.000 intron (NM_004274, intron 4 of 13) intron (NM_004274, intron 4 of 13) 231140 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr6-6143 chr6 167553759 167553969 + 9.07 0.000 Intergenic Intergenic -81074 NR_134591 105378127 Hs.58456 NR_134591 LOC105378127 - uncharacterized LOC105378127 ncRNA chr1-6113 chr1 155188066 155188276 + 9.07 0.000 exon (NM_001044392, exon 3 of 5) exon (NM_001044392, exon 3 of 5) 4738 NM_001204294 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr3-4975 chr3 14668974 14669184 + 9.07 0.000 intron (NM_016474, intron 9 of 10) MLT1J|LTR|ERVL-MaLR -6062 NM_001184958 84077 Hs.661452 NM_032137 ENSG00000131379 C3orf20 - chromosome 3 open reading frame 20 protein-coding chr10-3498 chr10 69766291 69766501 + 9.07 0.000 Intergenic Intergenic -35510 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr6-3520 chr6 36585369 36585579 + 9.07 0.000 Intergenic MER33|DNA|hAT-Charlie -8839 NR_036610 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr2-9903 chr2 227907012 227907222 + 9.07 0.000 intron (NM_178821, intron 9 of 12) (T)n|Simple_repeat|Simple_repeat 35486 NM_178821 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr17-6347 chr17 76083659 76083869 + 9.07 0.000 TTS (NM_180990) TTS (NM_180990) 4582 NM_180990 353174 Hs.714919 NM_180990 ENSG00000186919 ZACN L2|LGICZ|LGICZ1|ZAC|ZAC1 zinc activated ion channel protein-coding chr11-4715 chr11 68739066 68739276 + 9.07 0.000 intron (NM_001039656, intron 5 of 5) intron (NM_001039656, intron 5 of 5) 12349 NM_004923 9633 Hs.145932 NM_004923 ENSG00000132749 TESMIN CXCDC2|MTL5|MTLT testis expressed metallothionein like protein protein-coding chr5-5342 chr5 130880161 130880371 + 9.07 0.000 Intergenic Intergenic 284990 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr9-2605 chr9 6354078 6354288 + 9.07 0.000 Intergenic Intergenic 25808 NM_001001874 89882 Hs.351815 NM_033516 ENSG00000170777 TPD52L3 D55|NYDSP25|hD55 TPD52 like 3 protein-coding chr9-5183 chr9 70421498 70421708 + 9.07 0.000 Intergenic Intergenic -6946 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr17-3712 chr17 18103239 18103449 + 9.07 0.000 intron (NM_001388, intron 9 of 12) MIRb|SINE|MIR -5412 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr19-3503 chr19 40323805 40324015 + 9.07 0.000 intron (NR_046202, intron 8 of 8) intron (NR_046202, intron 8 of 8) 24487 NR_046202 126526 Hs.631557 NM_178830 ENSG00000160392 C19orf47 - chromosome 19 open reading frame 47 protein-coding chr15-5008 chr15 81062037 81062247 + 9.07 0.000 Intergenic Intergenic 61219 NM_022566 59274 Hs.513071 NM_022566 ENSG00000140406 TLNRD1 MESDC1 talin rod domain containing 1 protein-coding chr1-5675 chr1 43587594 43587804 + 9.07 0.000 intron (NM_001329138, intron 10 of 36) intron (NM_001329138, intron 10 of 36) 56816 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr2-11219 chr2 161651162 161651372 + 9.07 0.000 intron (NM_001354451, intron 1 of 25) MER52A|LTR|ERV1 26851 NM_001354455 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr1-9129 chr1 18586822 18587032 + 9.07 0.000 Intergenic MIRb|SINE|MIR -43919 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr11-10468 chr11 117737343 117737553 + 9.07 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 59768 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr16-2580 chr16 85505223 85505433 + 9.07 0.000 Intergenic Intergenic -106081 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr15-2380 chr15 50677294 50677504 + 9.07 0.000 intron (NR_149154, intron 1 of 37) MLT1A|LTR|ERVL-MaLR 9398 NM_001301212 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr1-5057 chr1 94758101 94758311 + 9.07 0.000 intron (NR_160781, intron 1 of 4) intron (NR_160781, intron 1 of 4) -12306 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr2-13837 chr2 176657286 176657496 + 9.07 0.000 Intergenic Intergenic 19637 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr7-7141 chr7 2723100 2723310 + 9.07 0.000 intron (NM_001321766, intron 6 of 6) intron (NM_001321766, intron 6 of 6) 35003 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr5-6811 chr5 101033854 101034064 + 9.07 0.000 Intergenic L1MC3|LINE|L1 -130677 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr16-6274 chr16 31235416 31235626 + 9.07 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -18428 NM_152901 260434 Hs.58314 NM_152901 ENSG00000169900 PYDC1 ASC2|POP1|PYC1|cPOP1 pyrin domain containing 1 protein-coding chr5-2230 chr5 860920 861130 + 9.07 0.000 Intergenic Intergenic -10039 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr11-10447 chr11 117132230 117132440 + 9.07 0.000 Intergenic AluSq|SINE|Alu -11949 NM_001184748 5049 Hs.728488 NM_002572 ENSG00000168092 PAFAH1B2 HEL-S-303 platelet activating factor acetylhydrolase 1b catalytic subunit 2 protein-coding chr10-3660 chr10 100832216 100832426 + 9.07 0.000 Intergenic Intergenic -80642 NM_001136123 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr3-4221 chr3 134643053 134643263 + 9.07 0.000 intron (NM_001350860, intron 1 of 7) intron (NM_001350860, intron 1 of 7) 7860 NM_001366276 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr5-5972 chr5 119644986 119645196 + 9.07 0.000 Intergenic MIR|SINE|MIR 15532 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr2-7781 chr2 41343116 41343326 + 9.07 0.000 Intergenic L1MA5A|LINE|L1 -534334 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr1-8210 chr1 24752409 24752619 + 9.07 0.000 intron (NM_013943, intron 1 of 5) MLT1J2|LTR|ERVL-MaLR 7067 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr11-5971 chr11 18708225 18708435 + 9.07 0.000 intron (NM_173588, intron 18 of 22) intron (NM_173588, intron 18 of 22) 9551 NM_153347 144110 Hs.502100 NM_153347 ENSG00000151117 TMEM86A - transmembrane protein 86A protein-coding chr8-2942 chr8 28762932 28763142 + 9.07 0.000 Intergenic Intergenic 61536 NR_073469 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr17-5211 chr17 16287777 16287987 + 9.07 0.000 intron (NM_004278, intron 2 of 6) intron (NM_004278, intron 2 of 6) 5868 NR_031698 100302124 NR_031698 ENSG00000221355 MIR1288 MIRN1288|hsa-mir-1288 microRNA 1288 ncRNA chr1-10149 chr1 107778486 107778696 + 9.07 0.000 intron (NM_006113, intron 3 of 26) intron (NM_006113, intron 3 of 26) -90092 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr9-6509 chr9 103754920 103755130 + 9.07 0.000 Intergenic MER63B|DNA|hAT-Blackjack -244684 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr10-5754 chr10 103086208 103086418 + 9.07 0.000 3' UTR (NM_017649, exon 8 of 8) 3' UTR (NM_017649, exon 8 of 8) 67508 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr8-4651 chr8 135072021 135072231 + 9.07 0.000 Intergenic LTR28|LTR|ERV1 -162005 NR_120396 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA chrX-1239 chrX 93691511 93691721 + 9.07 0.000 intron (NM_001171110, intron 3 of 4) L1MB7|LINE|L1 17410 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr7-9431 chr7 133737112 133737322 + 9.07 0.000 intron (NM_021807, intron 10 of 17) intron (NM_021807, intron 10 of 17) 87671 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr7-3992 chr7 138770833 138771043 + 9.07 0.000 intron (NM_130840, intron 2 of 20) intron (NM_130840, intron 2 of 20) 3099 NM_130841 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr3-7052 chr3 173914150 173914360 + 9.07 0.000 intron (NR_046664, intron 2 of 3) MamGypLTR1c|LTR|Gypsy 6541 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chrX-4079 chrX 22068360 22068570 + 9.07 0.000 intron (NM_001282754, intron 3 of 20) intron (NM_001282754, intron 3 of 20) 36140 NM_000444 5251 Hs.495834 NM_000444 ENSG00000102174 PHEX HPDR|HPDR1|HYP|HYP1|LXHR|PEX|XLH phosphate regulating endopeptidase homolog X-linked protein-coding chr10-4848 chr10 14309705 14309915 + 9.07 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 21074 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr17-1902 chr17 66303230 66303440 + 9.07 0.000 intron (NM_002737, intron 1 of 16) CpG 722 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr16-5533 chr16 26049260 26049470 + 9.07 0.000 intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) 24128 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chrX-2215 chrX 41824591 41824801 + 9.07 0.000 intron (NM_003688, intron 2 of 26) LTR41|LTR|ERVL 98338 NM_003688 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr16-2482 chr16 88466466 88466676 + 9.07 0.000 intron (NM_153813, intron 1 of 9) intron (NM_153813, intron 1 of 9) -2347 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr10-4957 chr10 28463781 28463991 + 9.07 0.000 intron (NR_134496, intron 1 of 2) ERVL-B4-int|LTR|ERVL 31927 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chrX-5057 chrX 123770462 123770672 + 9.07 0.000 Intergenic LTR33A|LTR|ERVL -37515 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr1-8373 chr1 67429544 67429754 + 9.07 0.000 intron (NM_001018068, intron 1 of 7) CpG 753 NM_001018067 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr12-3738 chr12 28498043 28498253 + 9.07 0.000 intron (NM_001352082, intron 13 of 13) intron (NM_001352082, intron 13 of 13) -307410 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr18-1488 chr18 64240079 64240289 + 9.07 0.000 intron (NR_033983, intron 2 of 2) intron (NR_033983, intron 2 of 2) 19871 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr8-4910 chr8 93260589 93260799 + 9.07 0.000 Intergenic Intergenic -93844 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr11-5151 chr11 2491758 2491968 + 9.07 0.000 intron (NM_181798, intron 1 of 15) L1M1|LINE|L1 30409 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr19-2482 chr19 4222439 4222649 + 9.07 0.000 intron (NM_133475, intron 19 of 21) MER58C|DNA|hAT-Charlie -6979 NM_005755 10148 Hs.501452 NM_005755 ENSG00000105246 EBI3 IL-27B|IL27B|IL35B Epstein-Barr virus induced 3 protein-coding chr12-3437 chr12 111653984 111654194 + 9.07 0.000 intron (NM_006768, intron 10 of 11) intron (NM_006768, intron 10 of 11) 31867 NM_006768 8315 Hs.530940 NM_006768 ENSG00000089234 BRAP BRAP2|IMP|RNF52 BRCA1 associated protein protein-coding chr2-5816 chr2 232272200 232272410 + 9.07 0.000 intron (NR_046477, intron 12 of 18) intron (NR_046477, intron 12 of 18) 99652 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr9-8229 chr9 109845892 109846102 + 9.07 0.000 intron (NM_053016, intron 1 of 6) L2a|LINE|L2 65799 NM_053016 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr7-5696 chr7 69516778 69516988 + 9.07 0.000 Intergenic AluSz6|SINE|Alu 80741 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr14-3038 chr14 58484034 58484244 + 9.07 0.000 intron (NM_001329944, intron 21 of 31) MIRb|SINE|MIR 44458 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr12-7305 chr12 53985406 53985616 + 9.07 0.000 promoter-TSS (NR_047506) promoter-TSS (NR_047506) 8 NR_047506 100874365 Hs.607141 NR_047506 ENSG00000251151 HOXC-AS3 - HOXC cluster antisense RNA 3 ncRNA chr9-3078 chr9 14081177 14081387 + 9.07 0.000 TTS (NM_001369474) TTS (NM_001369474) 99520 NM_001282787 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr20-2077 chr20 18190426 18190636 + 9.07 0.000 Intergenic Intergenic 45432 NR_028402 57325 Hs.488051 NM_020536 ENSG00000149474 KAT14 ATAC2|CRP2BP|CSRP2BP|PRO1194|dJ717M23.1 lysine acetyltransferase 14 protein-coding chr12-4719 chr12 50333595 50333805 + 9.07 0.000 intron (NM_001145475, intron 5 of 7) MLT1C|LTR|ERVL-MaLR -50180 NM_001113546 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr21-1554 chr21 9726463 9726673 + 9.07 0.000 Intergenic L3|LINE|CR1 64379 NR_135513 105379514 Hs.543309 NR_135513 LOC105379514 - uncharacterized LOC105379514 ncRNA chr19-4817 chr19 35546708 35546918 + 9.07 0.000 promoter-TSS (NR_038396) promoter-TSS (NR_038396) -784 NR_038396 100506469 Hs.661816 NR_038396 ENSG00000236144 TMEM147-AS1 - TMEM147 antisense RNA 1 ncRNA chr1-7173 chr1 208305961 208306171 + 9.07 0.000 Intergenic L2b|LINE|L2 -61682 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr1-5990 chr1 44476523 44476733 + 9.07 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 52627 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr15-4608 chr15 60860047 60860257 + 9.07 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 178583 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr1-10130 chr1 102191853 102192063 + 9.07 0.000 Intergenic Intergenic -194724 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr5-7576 chr5 41240773 41240983 + 9.07 0.000 intron (NM_001115131, intron 1 of 17) L1M2|LINE|L1 20591 NM_001115131 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding chr1-6623 chr1 43293191 43293401 + 9.07 0.000 Intergenic Intergenic -7686 NM_001253357 7075 Hs.78824 NM_005424 ENSG00000066056 TIE1 JTK14|TIE tyrosine kinase with immunoglobulin like and EGF like domains 1 protein-coding chr21-1004 chr21 15683062 15683272 + 9.07 0.000 Intergenic Intergenic -46767 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr6-6179 chr6 9467764 9467974 + 9.07 0.000 Intergenic Intergenic 815660 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr4-2595 chr4 122000957 122001167 + 9.07 0.000 Intergenic LFSINE_Vert|SINE|tRNA -49002 NM_001130698 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr19-3740 chr19 47250719 47250929 + 9.07 0.000 Intergenic L1ME3A|LINE|L1 -5701 NM_015603 26093 Hs.227782 NM_015603 ENSG00000105321 CCDC9 - coiled-coil domain containing 9 protein-coding chr18-2175 chr18 59305338 59305548 + 9.07 0.000 intron (NM_181654, intron 2 of 2) intron (NM_181654, intron 2 of 2) 13206 NM_181654 339302 Hs.449884 NM_181654 ENSG00000166569 CPLX4 CPX-IV|CPXIV complexin 4 protein-coding chr2-8766 chr2 164268454 164268664 + 9.07 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 299936 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr8-4321 chr8 98990270 98990480 + 9.07 0.000 Intergenic Intergenic -22891 NM_152564 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr11-5522 chr11 87627644 87627854 + 9.07 0.000 Intergenic MER96B|DNA|hAT-Tip100 91662 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr16-6515 chr16 61612533 61612743 + 9.07 0.000 Intergenic Intergenic 423800 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr7-8030 chr7 19377158 19377368 + 9.07 0.000 Intergenic Intergenic -231842 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chr9-5996 chr9 134827649 134827859 + 9.07 0.000 intron (NM_001278074, intron 63 of 65) intron (NM_001278074, intron 63 of 65) 21615 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr5-4450 chr5 5134832 5135042 + 9.07 0.000 intron (NR_109915, intron 1 of 3) intron (NR_109915, intron 1 of 3) 5117 NR_109915 101929176 Hs.208717 NR_109915 CTD-2297D10.2 - uncharacterized LOC101929176 ncRNA chr21-662 chr21 41544171 41544381 + 9.07 0.000 Intergenic AluJo|SINE|Alu -36118 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr3-5855 chr3 33662863 33663073 + 9.07 0.000 intron (NM_001365634, intron 7 of 35) intron (NM_001365634, intron 7 of 35) -3289 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr7-6231 chr7 131930348 131930558 + 9.07 0.000 intron (NR_110836, intron 4 of 5) intron (NR_110836, intron 4 of 5) 20233 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr10-4428 chr10 68806793 68807003 + 9.07 0.000 Intergenic Intergenic -20633 NM_001130161 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr17-6721 chr17 80975321 80975531 + 9.07 0.000 Intergenic AluJo|SINE|Alu -4213 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr7-4570 chr7 6491232 6491442 + 9.07 0.000 Intergenic Alu|SINE|Alu -7185 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr5-4218 chr5 126415013 126415223 + 9.07 0.000 intron (NM_001146319, intron 1 of 13) MIR3|SINE|MIR -8028 NM_001146320 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chrX-3485 chrX 37909973 37910183 + 9.07 0.000 Intergenic MER5A|DNA|hAT-Charlie -62507 NM_006520 6990 Hs.446392 NM_006520 ENSG00000165169 DYNLT3 RP3|TCTE1L|TCTEX1L dynein light chain Tctex-type 3 protein-coding chr18-2502 chr18 58578947 58579157 + 9.07 0.000 exon (NM_052947, exon 4 of 13) exon (NM_052947, exon 4 of 13) -21568 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr9-1945 chr9 34137663 34137873 + 9.07 0.000 Intergenic SVA_D|Retroposon|SVA -11070 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr7-4703 chr7 45525275 45525485 + 9.07 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -48760 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr12-5551 chr12 624635 624845 + 9.07 0.000 intron (NM_016533, intron 1 of 3) AluSx|SINE|Alu -6151 NR_122124 100049716 Hs.655804 NR_122124 ENSG00000177406 LOC100049716 - uncharacterized LOC100049716 ncRNA chr3-7963 chr3 168975126 168975336 + 9.07 0.000 Intergenic Intergenic 73286 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr2-2616 chr2 45922728 45922938 + 9.07 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 271158 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr3-8407 chr3 105635943 105636153 + 9.07 0.000 Intergenic L2|LINE|L2 231543 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr22-1299 chr22 41998664 41998874 + 9.07 0.000 promoter-TSS (NM_152613) promoter-TSS (NM_152613) -19 NM_152613 164684 Hs.655541 NM_152613 ENSG00000183066 WBP2NL GRAMD7|PAWP WBP2 N-terminal like protein-coding chr16-2640 chr16 23744566 23744776 + 9.07 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -10355 NM_022097 63928 Hs.178589 NM_022097 ENSG00000166869 CHP2 - calcineurin like EF-hand protein 2 protein-coding chr7-4689 chr7 43009802 43010012 + 9.07 0.000 Intergenic Intergenic 77531 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr1-4165 chr1 21254378 21254588 + 9.07 0.000 intron (NM_001113347, intron 6 of 16) intron (NM_001113347, intron 6 of 16) 25132 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr19-4160 chr19 38298942 38299152 + 9.07 0.000 Intergenic Intergenic -5204 NM_001317801 64073 Hs.631544 NM_022125 ENSG00000167644 C19orf33 H2RSP|IMUP|IMUP-1|IMUP-2 chromosome 19 open reading frame 33 protein-coding chr10-5877 chr10 116048180 116048390 + 9.07 0.000 Intergenic Intergenic 146504 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr19-6724 chr19 37980789 37980999 + 9.07 0.000 intron (NM_015073, intron 1 of 21) intron (NM_015073, intron 1 of 21) 73686 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr20-1751 chr20 48788131 48788341 + 9.07 0.000 intron (NM_020820, intron 1 of 39) intron (NM_020820, intron 1 of 39) 39763 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr19-3260 chr19 2191713 2191923 + 9.07 0.000 intron (NM_032482, intron 5 of 27) intron (NM_032482, intron 5 of 27) 27885 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr16-2811 chr16 67459842 67460052 + 9.07 0.000 intron (NM_004691, intron 1 of 7) intron (NM_004691, intron 1 of 7) 21210 NM_004691 9114 Hs.106876 NM_004691 ENSG00000159720 ATP6V0D1 ATP6D|ATP6DV|P39|VATX|VMA6|VPATPD ATPase H+ transporting V0 subunit d1 protein-coding chr14-3902 chr14 99362348 99362558 + 9.07 0.000 Intergenic L2a|LINE|L2 -90256 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr1-16582 chr1 236075979 236076189 + 9.07 0.000 Intergenic Intergenic -10994 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chrX-1240 chrX 95239305 95239515 + 9.07 0.000 Intergenic L1MA1|LINE|L1 -176184 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr14-3312 chr14 86044424 86044634 + 9.07 0.000 intron (NR_110155, intron 1 of 3) L1PA7|LINE|L1 109851 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr6-7709 chr6 88100322 88100532 + 9.07 0.000 Intergenic MIR|SINE|MIR 44910 NM_033181 1268 Hs.75110 NM_016083 ENSG00000118432 CNR1 CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR cannabinoid receptor 1 protein-coding chrX-3125 chrX 9668661 9668871 + 9.07 0.000 intron (NM_001139466, intron 5 of 17) HUERS-P1-int|LTR|ERV1 97081 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr13-2813 chr13 102681459 102681669 + 9.07 0.000 Intergenic Intergenic 12957 NM_001010977 196541 Hs.508623 NM_001010977 ENSG00000139780 METTL21C C13orf39 methyltransferase like 21C protein-coding chr7-6069 chr7 114301487 114301697 + 9.07 0.000 intron (NR_033766, intron 2 of 19) MIR3|SINE|MIR -113223 NM_014491 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr2-5024 chr2 231557856 231558066 + 9.07 0.000 Intergenic MER5A|DNA|hAT-Charlie -27516 NM_006056 10316 Hs.471619 NM_006056 ENSG00000171596 NMUR1 (FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R neuromedin U receptor 1 protein-coding chrX-291 chrX 86148262 86148472 + 9.07 0.000 promoter-TSS (NM_053281) promoter-TSS (NM_053281) -84 NM_001139514 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr15-1808 chr15 99937035 99937245 + 9.07 0.000 Intergenic L1MB8|LINE|L1 130117 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr18-246 chr18 63319801 63320011 + 9.07 0.000 promoter-TSS (NM_000657) promoter-TSS (NM_000657) -526 NM_000657 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr15-4115 chr15 78732989 78733199 + 9.07 0.000 Intergenic Intergenic -18943 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr6-2879 chr6 7476291 7476501 + 9.07 0.000 Intergenic L2c|LINE|L2 -65275 NM_004415 1832 Hs.519873 NM_004415 ENSG00000096696 DSP DCWHKTA|DP desmoplakin protein-coding chrX-2345 chrX 64351899 64352109 + 9.07 0.000 intron (NM_017677, intron 4 of 13) MLT2A2|LTR|ERVL 43448 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr20-4070 chr20 38523764 38523974 + 9.07 0.000 intron (NM_001282917, intron 10 of 29) L2c|LINE|L2 7306 NR_039605 100616190 NR_039605 ENSG00000275453 MIR548O2 - microRNA 548o-2 ncRNA chr3-4150 chr3 123447340 123447550 + 9.07 0.000 exon (NM_183357, exon 1 of 21) exon (NM_183357, exon 1 of 21) 1100 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr7-9313 chr7 128274795 128275005 + 9.07 0.000 Intergenic L2c|LINE|L2 33622 NM_000230 3952 Hs.194236 NM_000230 ENSG00000174697 LEP LEPD|OB|OBS leptin protein-coding chr1-9965 chr1 80240696 80240906 + 9.07 0.000 Intergenic THE1D|LTR|ERVL-MaLR -294954 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr1-6550 chr1 30841279 30841489 + 9.07 0.000 Intergenic Intergenic 16732 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr4-5918 chr4 144453898 144454108 + 9.07 0.000 Intergenic Intergenic 192016 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA chr22-2856 chr22 44786551 44786761 + 9.07 0.000 intron (NM_181335, intron 2 of 11) intron (NM_181335, intron 2 of 11) 34098 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr7-2128 chr7 32892720 32892930 + 9.07 0.000 Intergenic Intergenic -1065 NM_015483 25948 Hs.372541 NM_015483 ENSG00000170852 KBTBD2 BKLHD1 kelch repeat and BTB domain containing 2 protein-coding chrX-3395 chrX 4125720 4125930 + 9.07 0.000 Intergenic L1MC1|LINE|L1 -205083 NR_146579 729162 Hs.657302 NR_146578 FAM239B - zinc finger protein 839 pseudogene pseudo chr6-3474 chr6 4083046 4083256 + 9.07 0.000 intron (NR_104464, intron 1 of 5) intron (NR_104464, intron 1 of 5) 3942 NR_104464 404220 Hs.716731 NM_206834 ENSG00000185689 C6orf201 dJ1013A10.5 chromosome 6 open reading frame 201 protein-coding chr4-6911 chr4 15299405 15299615 + 9.07 0.000 intron (NR_125911, intron 1 of 5) intron (NR_125911, intron 1 of 5) -40478 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr11-4991 chr11 72580962 72581172 + 9.07 0.000 intron (NM_001143839, intron 22 of 29) intron (NM_001143839, intron 22 of 29) 10411 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr13-885 chr13 36999957 37000167 + 9.07 0.000 promoter-TSS (NM_001142364) promoter-TSS (NM_001142364) -695 NM_001142364 29880 Hs.507769 NM_013338 ENSG00000120697 ALG5 bA421P11.2 ALG5 dolichyl-phosphate beta-glucosyltransferase protein-coding chr15-2731 chr15 98590537 98590747 + 9.07 0.000 Intergenic Intergenic -57897 NM_000875 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding chr10-3208 chr10 100828495 100828705 + 9.07 0.000 3' UTR (NM_003987, exon 11 of 11) 3' UTR (NM_003987, exon 11 of 11) 82889 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr17-3238 chr17 18979985 18980195 + 9.07 0.000 intron (NM_001039999, intron 3 of 5) intron (NM_001039999, intron 3 of 5) 24674 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr1-7762 chr1 39090256 39090466 + 9.07 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 6194 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr1-7311 chr1 246821051 246821261 + 9.07 0.000 Intergenic Intergenic 31539 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr16-2858 chr16 86537971 86538181 + 9.07 0.000 intron (NR_027490, intron 7 of 7) intron (NR_027490, intron 7 of 7) 17159 NM_022764 64779 Hs.343627 NM_022764 ENSG00000103248 MTHFSD - methenyltetrahydrofolate synthetase domain containing protein-coding chr7-3961 chr7 132355046 132355256 + 9.07 0.000 intron (NM_020911, intron 3 of 31) intron (NM_020911, intron 3 of 31) 94290 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr14-2520 chr14 105102592 105102802 + 9.07 0.000 Intergenic Intergenic 8550 NR_110546 102723354 Hs.569410 NR_110546 LINC02298 - long intergenic non-protein coding RNA 2298 ncRNA chr1-14419 chr1 44905239 44905449 + 9.07 0.000 intron (NM_001166588, intron 5 of 9) MLT2F|LTR|ERVL -62091 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr10-3632 chr10 97128780 97128990 + 9.07 0.000 intron (NM_003061, intron 4 of 36) intron (NM_003061, intron 4 of 36) 26129 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr5-8663 chr5 140363716 140363926 + 9.07 0.000 exon (NM_031467, exon 9 of 22) exon (NM_031467, exon 9 of 22) 3627 NM_001258428 83697 Hs.550313 NM_031467 ENSG00000113073 SLC4A9 AE4 solute carrier family 4 member 9 protein-coding chr15-5238 chr15 97240069 97240279 + 9.07 0.000 Intergenic MIR|SINE|MIR 281637 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chr14-2930 chr14 42807128 42807338 + 9.07 0.000 Intergenic Intergenic 1200377 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr9-4595 chr9 97954601 97954811 + 9.07 0.000 Intergenic Intergenic -9854 NM_018437 55363 Hs.176626 NM_018437 ENSG00000136929 HEMGN CT155|EDAG|EDAG-1|NDR hemogen protein-coding chr7-4177 chr7 117673857 117674067 + 9.07 0.000 Intergenic Intergenic -109286 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr8-2392 chr8 53833117 53833327 + 9.07 0.000 intron (NM_213620, intron 2 of 13) MIRb|SINE|MIR 9820 NM_213620 51606 Hs.491737 NM_015941 ENSG00000047249 ATP6V1H CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase H+ transporting V1 subunit H protein-coding chr4-1788 chr4 5017252 5017462 + 9.07 0.000 intron (NM_018659, intron 1 of 3) intron (NM_018659, intron 1 of 3) 2101 NM_018659 54360 Hs.13872 NM_018659 ENSG00000170891 CYTL1 C17|C4orf4 cytokine like 1 protein-coding chr12-5169 chr12 103504622 103504832 + 9.07 0.000 Intergenic Intergenic 8687 NR_135004 105369945 Hs.742785 NR_135004 LOC105369945 - uncharacterized LOC105369945 ncRNA chr4-1911 chr4 40335068 40335278 + 9.07 0.000 promoter-TSS (NM_017581) promoter-TSS (NM_017581) -160 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chr11-4156 chr11 47288588 47288798 + 9.07 0.000 intron (NM_130476, intron 15 of 32) intron (NM_130476, intron 15 of 32) -16583 NR_120569 101928943 Hs.664956 NR_120568 ENSG00000256746 LOC101928943 - uncharacterized LOC101928943 ncRNA chrX-5189 chrX 133882663 133882873 + 9.07 0.000 intron (NM_001164619, intron 1 of 6) intron (NM_001164619, intron 1 of 6) -14675 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr11-4369 chr11 74717142 74717352 + 9.07 0.000 intron (NM_001304390, intron 1 of 10) L2a|LINE|L2 2056 NM_001304415 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr13-3752 chr13 42544373 42544583 + 9.07 0.000 Intergenic Intergenic -18258 NM_033012 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr4-3965 chr4 183726662 183726872 + 9.07 0.000 Intergenic LTR5A|LTR|ERVK 67474 NM_021942 60684 Hs.443240 NM_021942 ENSG00000168538 TRAPPC11 C4orf41|FOIGR|GRY|LGMD2S|LGMDR18 trafficking protein particle complex 11 protein-coding chr1-15303 chr1 117467321 117467531 + 9.07 0.000 intron (NM_006699, intron 8 of 12) intron (NM_006699, intron 8 of 12) 99977 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr12-2767 chr12 52860148 52860358 + 9.07 0.000 Intergenic Intergenic -11259 NM_173352 196374 Hs.665267 NM_173352 ENSG00000170423 KRT78 CK-78|K5B|K78|Kb40 keratin 78 protein-coding chr17-6273 chr17 39579046 39579256 + 9.07 0.000 Intergenic Intergenic 28769 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr15-2610 chr15 65332679 65332889 + 9.07 0.000 intron (NM_004884, intron 6 of 13) intron (NM_004884, intron 6 of 13) 28107 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr18-2795 chr18 3392112 3392322 + 9.07 0.000 Intergenic Intergenic -19710 NM_174886 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr12-5275 chr12 110267419 110267629 + 9.07 0.000 Intergenic Intergenic -13723 NM_001681 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr9-4617 chr9 108615009 108615219 + 9.07 0.000 Intergenic Intergenic 240872 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr8-7194 chr8 124781539 124781749 + 9.07 0.000 Intergenic Intergenic -40341 NR_039806 100616221 NR_039806 ENSG00000283609 MIR4662A - microRNA 4662a ncRNA chr1-6772 chr1 78355917 78356127 + 9.07 0.000 intron (NR_027310, intron 4 of 5) intron (NR_027310, intron 4 of 5) 126423 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr1-4837 chr1 26033235 26033445 + 9.07 0.000 intron (NM_004455, intron 8 of 10) intron (NM_004455, intron 8 of 10) 11565 NM_004455 2134 Hs.150956 NM_004455 ENSG00000158008 EXTL1 EXTL exostosin like glycosyltransferase 1 protein-coding chr5-4092 chr5 66843334 66843544 + 9.07 0.000 intron (NM_015183, intron 1 of 27) intron (NM_015183, intron 1 of 27) 14666 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr18-1093 chr18 55300634 55300844 + 9.07 0.000 intron (NM_001243228, intron 8 of 19) intron (NM_001243228, intron 8 of 19) 1921 NM_001243236 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr4-7473 chr4 71339034 71339244 + 9.07 0.000 promoter-TSS (NM_003759) promoter-TSS (NM_003759) 86 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr2-6213 chr2 25845946 25846156 + 9.07 0.000 intron (NM_018263, intron 1 of 11) L1MD2|LINE|L1 -15150 NM_001369346 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr15-3914 chr15 33346905 33347115 + 9.07 0.000 intron (NM_001243996, intron 1 of 102) L1MC3|LINE|L1 36043 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr2-11869 chr2 22820789 22820999 + 9.07 0.000 Intergenic MER21B|LTR|ERVL 284415 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr7-3306 chr7 45435872 45436082 + 9.07 0.000 Intergenic L1MEf|LINE|L1 -138163 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr9-5101 chr9 35285407 35285617 + 9.07 0.000 intron (NM_006377, intron 7 of 38) AluJb|SINE|Alu -56384 NM_001371187 chr5-6269 chr5 100508871 100509081 + 9.07 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -26398 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr2-10457 chr2 215073569 215073779 + 9.07 0.000 intron (NR_103740, intron 2 of 54) intron (NR_103740, intron 2 of 54) -41588 NM_015657 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr11-6027 chr11 26028494 26028704 + 9.07 0.000 Intergenic MER45C|DNA|hAT-Tip100 -160524 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr8-6548 chr8 69346804 69347014 + 9.07 0.000 Intergenic Intergenic 101335 NR_110433 100505739 Hs.127115 NR_110433 LINC01603 - long intergenic non-protein coding RNA 1603 ncRNA chr3-6150 chr3 57446429 57446639 + 9.07 0.000 intron (NM_001366028, intron 26 of 73) intron (NM_001366028, intron 26 of 73) 97810 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr11-9444 chr11 61147558 61147768 + 9.07 0.000 intron (NM_017966, intron 1 of 4) intron (NM_017966, intron 1 of 4) 13763 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chrX-2918 chrX 152285569 152285779 + 9.07 0.000 intron (NM_000808, intron 3 of 9) MLT1A0|LTR|ERVL-MaLR 106625 NR_029521 406897 NR_029521 ENSG00000207957 MIR105-1 MIRN105-1|mir-105-1 microRNA 105-1 ncRNA chr2-7283 chr2 235860030 235860240 + 9.07 0.000 intron (NM_001037131, intron 9 of 17) intron (NM_001037131, intron 9 of 17) 308251 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr5-1425 chr5 91954 92164 + 9.07 0.000 promoter-TSS (NM_052909) promoter-TSS (NM_052909) -109 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr3-8168 chr3 36766287 36766497 + 9.07 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -26531 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr14-2640 chr14 67553511 67553721 + 9.07 0.000 intron (NM_020715, intron 2 of 28) intron (NM_020715, intron 2 of 28) -19766 NM_001348546 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr13-1988 chr13 26880261 26880471 + 9.07 0.000 Intergenic Intergenic -119580 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr12-2448 chr12 52879455 52879665 + 9.07 0.000 Intergenic CpG 19424 NR_162090 113218482 NR_162090 MIR9898 - microRNA 9898 ncRNA chr2-3444 chr2 109260877 109261087 + 9.07 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 52643 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr14-2408 chr14 60093717 60093927 + 9.07 0.000 intron (NM_022495, intron 1 of 9) L1MB8|LINE|L1 1899 NM_001330177 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chr3-9010 chr3 18901043 18901253 + 9.07 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -247362 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr15-2148 chr15 75309759 75309969 + 9.07 0.000 Intergenic AluJb|SINE|Alu -26199 NM_001321847 54939 Hs.351327 NM_017828 ENSG00000140365 COMMD4 - COMM domain containing 4 protein-coding chr9-5799 chr9 128835124 128835334 + 9.07 0.000 intron (NR_148224, intron 11 of 12) MER91A|DNA|hAT-Tip100 -5435 NM_016390 51490 Hs.224137 NM_016390 ENSG00000198917 SPOUT1 C9orf114|CENP-32|CENP32|HSPC109 SPOUT domain containing methyltransferase 1 protein-coding chr21-1072 chr21 31842122 31842332 + 9.07 0.000 Intergenic LTR33A_|LTR|ERVL -30793 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr16-1780 chr16 1036820 1037030 + 9.07 0.000 Intergenic Intergenic -35831 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr2-14643 chr2 235297809 235298019 + 9.07 0.000 Intergenic Intergenic -196129 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr5-4967 chr5 78716241 78716451 + 9.07 0.000 Intergenic Intergenic -67574 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr8-4190 chr8 81883767 81883977 + 9.07 0.000 Intergenic LTR16B|LTR|ERVL -41586 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr5-2513 chr5 155857639 155857849 + 9.07 0.000 Intergenic L1MEc|LINE|L1 -469013 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr2-7772 chr2 40279089 40279299 + 9.07 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 151110 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr8-6688 chr8 82344826 82345036 + 9.07 0.000 Intergenic HAL1|LINE|L1 -502645 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr6-8272 chr6 139979370 139979580 + 9.07 0.000 intron (NR_121624, intron 1 of 2) intron (NR_121624, intron 1 of 2) 3156 NR_121623 100507477 Hs.179213 NR_121622 ENSG00000236013 LOC100507477 - uncharacterized LOC100507477 ncRNA chr3-4156 chr3 123817080 123817290 + 9.07 0.000 intron (NM_001321309, intron 3 of 32) intron (NM_001321309, intron 3 of 32) 67147 NM_053025 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr10-1266 chr10 132862778 132862988 + 9.07 0.000 intron (NM_001200049, intron 35 of 57) intron (NM_001200049, intron 35 of 57) -76736 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr10-5935 chr10 121303328 121303538 + 9.07 0.000 Intergenic MamRep434|DNA|TcMar-Tigger 227881 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr1-14080 chr1 29801625 29801835 + 9.07 0.000 Intergenic Intergenic 235882 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr11-9665 chr11 67143340 67143550 + 9.07 0.000 intron (NR_027473, intron 2 of 20) L1ME3B|LINE|L1 24182 NR_027473 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr18-1697 chr18 518901 519111 + 9.07 0.000 Intergenic MER21B|LTR|ERVL -3712 NR_136505 105376854 NR_136505 ENSG00000264265 LINC01925 - long intergenic non-protein coding RNA 1925 ncRNA chr2-14464 chr2 223993606 223993816 + 9.07 0.000 intron (NM_001136530, intron 3 of 8) intron (NM_001136530, intron 3 of 8) 36248 NM_022915 65080 Hs.203559 NM_022915 ENSG00000135900 MRPL44 COXPD16|L44MT|MRP-L44 mitochondrial ribosomal protein L44 protein-coding chr10-5126 chr10 50410114 50410324 + 9.07 0.000 intron (NM_147156, intron 6 of 10) intron (NM_147156, intron 6 of 10) -161609 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr3-6552 chr3 120449725 120449935 + 9.07 0.000 intron (NM_007085, intron 2 of 10) intron (NM_007085, intron 2 of 10) 1162 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr3-2412 chr3 194225936 194226146 + 9.07 0.000 intron (NR_125403, intron 1 of 2) L2c|LINE|L2 -19734 NR_125404 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chr7-5081 chr7 2330373 2330583 + 9.07 0.000 Intergenic MER21A|LTR|ERVL -16037 NM_013321 29886 Hs.584900 NM_013321 ENSG00000106266 SNX8 Mvp1 sorting nexin 8 protein-coding chr1-15410 chr1 151910652 151910862 + 9.07 0.000 Intergenic Intergenic -1246 NM_053055 117145 Hs.164070 NM_053055 ENSG00000159445 THEM4 CTMP thioesterase superfamily member 4 protein-coding chr4-4447 chr4 53734728 53734938 + 9.07 0.000 TTS (NR_125918) TTS (NR_125918) 38932 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr20-1192 chr20 4864875 4865085 + 9.07 0.000 intron (NM_005116, intron 13 of 16) intron (NM_005116, intron 13 of 16) -41372 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr7-4939 chr7 136476804 136477014 + 9.07 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -391743 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr10-6209 chr10 42832402 42832612 + 9.07 0.000 3' UTR (NM_014753, exon 23 of 23) 3' UTR (NM_014753, exon 23 of 23) -39014 NR_134479 101929445 Hs.376403 NR_134479 ENSG00000234944 LINC02623 - long intergenic non-protein coding RNA 2623 ncRNA chr6-6085 chr6 145350240 145350450 + 9.07 0.000 Intergenic Intergenic 336532 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr5-6321 chr5 130710228 130710438 + 9.07 0.000 Intergenic Intergenic 454923 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr1-5673 chr1 39369927 39370137 + 9.07 0.000 exon (NM_012090, exon 45 of 93) exon (NM_012090, exon 45 of 93) -39041 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr2-2242 chr2 222298506 222298716 + 9.07 0.000 exon (NM_181461, exon 1 of 8) exon (NM_181461, exon 1 of 8) 387 NM_181461 5077 Hs.42146 NM_000438 ENSG00000135903 PAX3 CDHS|HUP2|WS1|WS3 paired box 3 protein-coding chr7-3437 chr7 291286 291496 + 9.07 0.000 Intergenic CpG -88034 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr2-7490 chr2 17658591 17658801 + 9.07 0.000 Intergenic MLT1G3-int|LTR|ERVL-MaLR 95114 NM_001142286 79677 Hs.526728 NM_024624 ENSG00000163029 SMC6 SMC-6|SMC6L1|hSMC6 structural maintenance of chromosomes 6 protein-coding chr7-4785 chr7 80428427 80428637 + 9.07 0.000 Intergenic Intergenic -54093 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chrX-3106 chrX 150989204 150989414 + 9.07 0.000 3' UTR (NM_001301228, exon 5 of 5) 3' UTR (NM_001301228, exon 5 of 5) 5924 NM_001301228 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr18-1097 chr18 59719476 59719686 + 9.07 0.000 Intergenic Intergenic -22158 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr7-8658 chr7 71493129 71493339 + 9.07 0.000 intron (NM_022479, intron 5 of 10) intron (NM_022479, intron 5 of 10) -185464 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr4-5077 chr4 146123404 146123614 + 9.07 0.000 Intergenic Intergenic -1596 NR_038331 100505545 Hs.122199 NR_038331 ENSG00000248809 LINC01095 - long intergenic non-protein coding RNA 1095 ncRNA chr10-4513 chr10 90788913 90789123 + 9.07 0.000 intron (NM_019860, intron 1 of 2) L2b|LINE|L2 69021 NM_019860 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr7-3644 chr7 43816229 43816439 + 9.07 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 53183 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr16-6119 chr16 18054257 18054467 + 9.07 0.000 Intergenic Intergenic 278300 NM_001282507 101059938 Hs.634612 NM_001282507 ENSG00000214967 NPIPA7 NPIPA8 nuclear pore complex interacting protein family member A7 protein-coding chrX-5436 chrX 153862545 153862755 + 9.07 0.000 3' UTR (NM_001143963, exon 26 of 26) 3' UTR (NM_001143963, exon 26 of 26) 13294 NM_001143963 3897 Hs.522818 NM_000425 ENSG00000198910 L1CAM CAML1|CD171|HSAS|HSAS1|MASA|MIC5|N-CAM-L1|N-CAML1|NCAM-L1|S10|SPG1 L1 cell adhesion molecule protein-coding chr3-6206 chr3 62587876 62588086 + 9.07 0.000 intron (NM_003716, intron 7 of 29) intron (NM_003716, intron 7 of 29) -214431 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr1-7487 chr1 108892874 108893084 + 9.07 0.000 intron (NM_013296, intron 2 of 14) UCON55|DNA|TcMar-Tigger 15994 NM_001321038 29899 Hs.584901 NM_013296 ENSG00000121957 GPSM2 CMCS|DFNB82|LGN|PINS G protein signaling modulator 2 protein-coding chr2-2100 chr2 240520379 240520589 + 9.07 0.000 exon (NM_001354025, exon 9 of 17) exon (NM_001354025, exon 9 of 17) 37504 NM_016552 51281 Hs.656615 NM_016552 ENSG00000144504 ANKMY1 ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding chr8-1607 chr8 143477819 143478029 + 9.07 0.000 intron (NM_015117, intron 4 of 11) intron (NM_015117, intron 4 of 11) 28324 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr11-7762 chr11 81758641 81758851 + 9.07 0.000 Intergenic Intergenic 132090 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr21-1502 chr21 42294055 42294265 + 9.07 0.000 intron (NM_207627, intron 14 of 15) intron (NM_207627, intron 14 of 15) 21436 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr20-1905 chr20 62636908 62637118 + 9.07 0.000 Intergenic Intergenic -5490 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chr12-3942 chr12 3216817 3217027 + 9.07 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 139543 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr4-3947 chr4 172605518 172605728 + 9.07 0.000 intron (NM_001034845, intron 5 of 12) L2c|LINE|L2 83294 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr1-11429 chr1 64515605 64515815 + 9.07 0.000 intron (NM_001293274, intron 1 of 25) intron (NM_001293274, intron 1 of 25) 9796 NM_001293274 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr2-7813 chr2 45775735 45775945 + 9.07 0.000 intron (NM_005400, intron 1 of 14) L2a|LINE|L2 124165 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr10-6736 chr10 129141717 129141927 + 9.07 0.000 Intergenic Intergenic 228989 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr12-4858 chr12 59708145 59708355 + 9.07 0.000 intron (NM_001270623, intron 3 of 5) MER5A|DNA|hAT-Charlie 18880 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr11-10541 chr11 120430313 120430523 + 9.07 0.000 intron (NM_015313, intron 10 of 40) MIRb|SINE|MIR 45091 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr1-8246 chr1 31990898 31991108 + 9.07 0.000 Intergenic MIRb|SINE|MIR -22865 NR_073498 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr4-5062 chr4 143360062 143360272 + 9.07 0.000 intron (NM_207123, intron 1 of 10) intron (NM_207123, intron 1 of 10) 16707 NR_036091 100423017 NR_036091 ENSG00000265623 MIR3139 - microRNA 3139 ncRNA chr11-4894 chr11 57249133 57249343 + 9.07 0.000 Intergenic Intergenic -11785 NM_005161 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr5-5536 chr5 145599076 145599286 + 9.07 0.000 Intergenic Intergenic 236161 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr8-4120 chr8 73041247 73041457 + 9.07 0.000 intron (NM_017489, intron 9 of 9) L1MCb|LINE|L1 32488 NM_003218 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding chr13-2896 chr13 113026962 113027172 + 9.07 0.000 intron (NM_001320815, intron 3 of 30) intron (NM_001320815, intron 3 of 30) -17579 NM_001366645 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr12-2703 chr12 111927852 111928062 + 9.07 0.000 Intergenic Intergenic 28894 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo KI270844.1-2 KI270844.1 101117 101327 + 9.07 0.000 NA NA NA NA chr11-6287 chr11 60966963 60967173 + 9.07 0.000 Intergenic Intergenic -4612 NM_006725 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr12-4266 chr12 118890274 118890484 + 9.07 0.000 Intergenic Intergenic -56843 NR_134997 105370016 Hs.550627 NR_134997 ENSG00000255814 LINC02439 - long intergenic non-protein coding RNA 2439 ncRNA chr6-1470 chr6 39530395 39530605 + 9.07 0.000 intron (NM_001289021, intron 12 of 21) intron (NM_001289021, intron 12 of 21) -99110 NM_001289024 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr14-4640 chr14 54462136 54462346 + 9.07 0.000 Intergenic Intergenic -20867 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding chr12-6640 chr12 520996 521206 + 9.07 0.000 intron (NM_173593, intron 1 of 19) intron (NM_173593, intron 1 of 19) 61162 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr2-13577 chr2 156446025 156446235 + 9.07 0.000 intron (NM_000408, intron 1 of 16) AluSx|SINE|Alu 9751 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr8-5321 chr8 144542154 144542364 + 9.07 0.000 intron (NM_025251, intron 5 of 10) intron (NM_025251, intron 5 of 10) -13148 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chrX-3444 chrX 22588562 22588772 + 9.07 0.000 intron (NR_073010, intron 4 of 11) intron (NR_073010, intron 4 of 11) 315754 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr8-4048 chr8 62040228 62040438 + 9.07 0.000 Intergenic Tigger3|DNA|TcMar-Tigger 150494 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr4-6404 chr4 122553860 122554070 + 9.07 0.000 Intergenic Intergenic -65018 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr10-3369 chr10 21336859 21337069 + 9.07 0.000 Intergenic Intergenic 35986 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr10-4704 chr10 133658366 133658576 + 9.07 0.000 Intergenic Intergenic -31676 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family member B protein-coding chr18-2625 chr18 35372385 35372595 + 9.07 0.000 TTS (NM_001322291) TTS (NM_001322291) 4847 NM_001322290 252884 Hs.351005 NM_145756 ENSG00000186496 ZNF396 ZSCAN14 zinc finger protein 396 protein-coding chr14-1867 chr14 75526133 75526343 + 9.07 0.000 intron (NM_006399, intron 2 of 2) intron (NM_006399, intron 2 of 2) 3769 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr20-836 chr20 25247803 25248013 + 9.07 0.000 promoter-TSS (NM_002862) promoter-TSS (NM_002862) -177 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr1-5970 chr1 33370507 33370717 + 9.07 0.000 intron (NM_198040, intron 3 of 13) intron (NM_198040, intron 3 of 13) 4981 NM_001330488 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr12-2151 chr12 110555640 110555850 + 9.07 0.000 intron (NR_138550, intron 1 of 4) intron (NR_138550, intron 1 of 4) 27573 NR_138550 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr2-6694 chr2 24219594 24219804 + 9.07 0.000 TTS (NM_147152) TTS (NM_147152) 44646 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr4-4409 chr4 44447016 44447226 + 9.07 0.000 intron (NM_198353, intron 1 of 1) intron (NM_198353, intron 1 of 1) 1688 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr6-7387 chr6 50217837 50218047 + 9.07 0.000 Intergenic Intergenic -168013 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding chr21-857 chr21 32705229 32705439 + 9.07 0.000 intron (NM_203446, intron 2 of 32) L1MC4|LINE|L1 22587 NM_001160306 8867 Hs.473632 NM_003895 ENSG00000159082 SYNJ1 EIEE53|INPP5G|PARK20 synaptojanin 1 protein-coding chr19-2601 chr19 2176326 2176536 + 9.07 0.000 intron (NM_032482, intron 1 of 27) intron (NM_032482, intron 1 of 27) 12498 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr9-2387 chr9 128809315 128809525 + 9.07 0.000 3' UTR (NM_018201, exon 12 of 12) 3' UTR (NM_018201, exon 12 of 12) -9080 NM_004435 2021 Hs.745161 NM_004435 ENSG00000167136 ENDOG - endonuclease G protein-coding chr7-7280 chr7 35386854 35387064 + 9.07 0.000 Intergenic Intergenic 73104 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr16-3575 chr16 66969728 66969938 + 9.07 0.000 intron (NM_001185177, intron 9 of 12) intron (NM_001185177, intron 9 of 12) 2358 NM_001185176 23491 Hs.268700 NM_012122 ENSG00000172828 CES3 ES31 carboxylesterase 3 protein-coding chr17-7408 chr17 9011038 9011248 + 9.07 0.000 Intergenic MER1A|DNA|hAT-Charlie -10367 NM_004822 9423 Hs.660885 NM_004822 ENSG00000065320 NTN1 MRMV4|NTN1L netrin 1 protein-coding chr16-1960 chr16 68616455 68616665 + 9.07 0.000 Intergenic Intergenic -28750 NM_001793 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr4-5572 chr4 159642419 159642629 + 9.07 0.000 Intergenic Intergenic 135260 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr10-5055 chr10 37288832 37289042 + 9.07 0.000 Intergenic L1PA10|LINE|L1 -20249 NR_104061 101929520 Hs.144151 NR_104061 ENSG00000235687 LINC00993 - long intergenic non-protein coding RNA 993 ncRNA chr1-6828 chr1 97334513 97334723 + 9.07 0.000 intron (NM_000110, intron 16 of 22) intron (NM_000110, intron 16 of 22) 238695 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr2-2332 chr2 158498652 158498862 + 9.07 0.000 intron (NM_001005476, intron 1 of 20) intron (NM_001005476, intron 1 of 20) 41805 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr18-2680 chr18 57493088 57493298 + 9.07 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 57819 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr1-13715 chr1 15212852 15213062 + 9.07 0.000 intron (NM_001319665, intron 2 of 3) intron (NM_001319665, intron 2 of 3) -34268 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr7-7612 chr7 132539033 132539243 + 9.07 0.000 intron (NM_181775, intron 2 of 4) intron (NM_181775, intron 2 of 4) 37332 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr7-1911 chr7 2052868 2053078 + 9.07 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 36079 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr10-1974 chr10 32041626 32041836 + 9.07 0.000 intron (NM_004521, intron 2 of 25) AluJo|SINE|Alu 14694 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr12-5128 chr12 98621620 98621830 + 9.07 0.000 intron (NM_201613, intron 1 of 1) MIRb|SINE|MIR 22090 NR_003015 677832 Hs.693250 NR_003015 ENSG00000212443 SNORA53 ACA53 small nucleolar RNA, H/ACA box 53 snoRNA chr7-6708 chr7 2068791 2069001 + 9.07 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 20156 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr3-9691 chr3 65159106 65159316 + 9.07 0.000 Intergenic L1MB7|LINE|L1 -471211 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr16-6584 chr16 66802500 66802710 + 9.07 0.000 promoter-TSS (NM_001136505) promoter-TSS (NM_001136505) -985 NM_001136505 283847 Hs.376505 NM_173616 ENSG00000249961 TERB1 CCDC79 telomere repeat binding bouquet formation protein 1 protein-coding chr4-7954 chr4 110442574 110442784 + 9.07 0.000 Intergenic Intergenic -33476 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr6-5630 chr6 56795743 56795953 + 9.07 0.000 intron (NM_001144770, intron 2 of 94) HAL1|LINE|L1 47817 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr16-2271 chr16 2392939 2393149 + 9.07 0.000 intron (NR_003574, intron 8 of 16) L1ME2|LINE|L1 -36403 NM_001323538 899 Hs.1973 NM_001761 ENSG00000162063 CCNF FBX1|FBXO1 cyclin F protein-coding chr2-1418 chr2 157628848 157629058 + 9.07 0.000 promoter-TSS (NM_001111033) promoter-TSS (NM_001111033) -89 NM_145259 130399 Hs.562901 NM_145259 ENSG00000123612 ACVR1C ACVRLK7|ALK7 activin A receptor type 1C protein-coding chr21-827 chr21 42710441 42710651 + 9.07 0.000 intron (NM_001001578, intron 3 of 16) L1ME2|LINE|L1 56794 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chrX-721 chrX 147911756 147911966 + 9.07 0.000 promoter-TSS (NM_001185075) promoter-TSS (NM_001185075) -44 NR_024501 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr13-2655 chr13 80399900 80400110 + 9.07 0.000 Intergenic LTR3B|LTR|ERVK -58879 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr11-3138 chr11 46243491 46243701 + 9.07 0.000 Intergenic CpG -34066 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr2-13551 chr2 153057644 153057854 + 9.07 0.000 Intergenic L1PBa|LINE|L1 339112 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr12-3805 chr12 60394718 60394928 + 9.07 0.000 Intergenic Intergenic 705453 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr18-1032 chr18 79961911 79962121 + 9.07 0.000 Intergenic Intergenic -2627 NM_001136180 440498 Hs.191582 NM_001136180 ENSG00000226742 HSBP1L1 - heat shock factor binding protein 1 like 1 protein-coding chr4-7679 chr4 87489944 87490154 + 9.07 0.000 intron (NM_004684, intron 7 of 10) MER5B|DNA|hAT-Charlie 39454 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr7-9096 chr7 106010801 106011011 + 9.07 0.000 intron (NM_152750, intron 8 of 18) LTR16B2|LTR|ERVL 47642 NM_001301161 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr7-7027 chr7 131399087 131399297 + 9.07 0.000 intron (NM_001145354, intron 6 of 18) intron (NM_001145354, intron 6 of 18) 71316 NM_001321316 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr1-16016 chr1 199669203 199669413 + 9.07 0.000 Intergenic LTR32|LTR|ERVL -358402 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr3-4775 chr3 111265001 111265211 + 9.07 0.000 Intergenic L1MB2|LINE|L1 193290 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr1-6271 chr1 865215 865425 + 9.07 0.000 Intergenic Intergenic 11482 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr14-2918 chr14 39845856 39846066 + 9.07 0.000 Intergenic MIRb|SINE|MIR -413461 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr12-7815 chr12 99365075 99365285 + 9.07 0.000 intron (NM_152788, intron 12 of 25) FordPrefect|DNA|hAT-Tip100 -210090 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr17-7183 chr17 80975997 80976207 + 9.07 0.000 Intergenic AluSc|SINE|Alu -4889 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr10-6060 chr10 128813211 128813421 + 9.07 0.000 Intergenic Intergenic -99517 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr17-1430 chr17 4580525 4580735 + 9.07 0.000 Intergenic Intergenic -3377 NM_198501 342527 Hs.441709 NM_198501 ENSG00000188176 SMTNL2 - smoothelin like 2 protein-coding chr11-4371 chr11 75022974 75023184 + 9.07 0.000 Intergenic Intergenic 34146 NM_001367862 10825 Hs.191074 NM_006656 ENSG00000162139 NEU3 SIAL3 neuraminidase 3 protein-coding chr20-4455 chr20 62228123 62228333 + 9.07 0.000 promoter-TSS (NR_160555) promoter-TSS (NR_160555) -15 NR_160555 105369209 Hs.711994 NR_160555 LOC105369209 - uncharacterized LOC105369209 ncRNA chr9-5574 chr9 112554570 112554780 + 9.07 0.000 intron (NM_133465, intron 1 of 3) MER5B|DNA|hAT-Charlie -67031 NM_001350649 100133204 Hs.662552 NM_001350649 C9orf147 - chromosome 9 open reading frame 147 protein-coding chr5-8137 chr5 99639910 99640120 + 9.07 0.000 Intergenic LTR16A|LTR|ERVL 106025 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr6-7363 chr6 48151218 48151428 + 9.07 0.000 Intergenic L1PREC2|LINE|L1 -82634 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr1-13491 chr1 3857695 3857905 + 9.07 0.000 promoter-TSS (NM_014704) promoter-TSS (NM_014704) 324 NR_135150 1677 Hs.133089 NM_004402 ENSG00000169598 DFFB CAD|CPAN|DFF-40|DFF2|DFF40 DNA fragmentation factor subunit beta protein-coding chr9-6241 chr9 124463659 124463869 + 9.07 0.000 Intergenic L1ME2|LINE|L1 43635 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr9-5200 chr9 72648222 72648432 + 9.07 0.000 intron (NM_138691, intron 4 of 23) intron (NM_138691, intron 4 of 23) 126526 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr12-1939 chr12 105355777 105355987 + 9.07 0.000 intron (NM_001145199, intron 2 of 5) intron (NM_001145199, intron 2 of 5) 25191 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chrX-4160 chrX 31427617 31427827 + 9.07 0.000 intron (NM_000109, intron 60 of 78) intron (NM_000109, intron 60 of 78) 80576 NM_004014 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr5-9056 chr5 170491505 170491715 + 9.07 0.000 intron (NM_001034838, intron 1 of 7) intron (NM_001034838, intron 1 of 7) -12410 NM_014592 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chrX-2235 chrX 45697668 45697878 + 9.07 0.000 Intergenic Intergenic -33315 NR_102268 392452 Hs.745266 NR_102268 LOC392452 - mitochondrial fission factor pseudogene pseudo chr10-5692 chr10 100019831 100020041 + 9.07 0.000 Intergenic Intergenic -9989 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr7-5379 chr7 31991932 31992142 + 9.07 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 78370 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr6-5444 chr6 158148026 158148236 + 9.07 0.000 intron (NM_032861, intron 5 of 16) intron (NM_032861, intron 5 of 16) 20131 NM_032861 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr5-2224 chr5 381315 381525 + 9.07 0.000 intron (NM_020731, intron 4 of 11) L1MC4|LINE|L1 61740 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr20-1066 chr20 25865522 25865732 + 9.07 0.000 Intergenic SST1|Satellite|centr -11606 NR_110001 101926935 Hs.737440 NR_110001 LOC101926935 - uncharacterized LOC101926935 ncRNA chr11-5565 chr11 102226777 102226987 + 9.07 0.000 intron (NM_001130145, intron 7 of 8) intron (NM_001130145, intron 7 of 8) -90602 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr3-9547 chr3 52915902 52916112 + 9.07 0.000 intron (NM_016329, intron 14 of 20) intron (NM_016329, intron 14 of 20) -18459 NM_198563 375346 Hs.744189 NM_198563 ENSG00000213533 STIMATE TMEM110 STIM activating enhancer protein-coding chr14-972 chr14 69611481 69611691 + 9.07 0.000 promoter-TSS (NM_014734) promoter-TSS (NM_014734) -10 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr19-5636 chr19 5024228 5024438 + 9.07 0.000 intron (NM_001370094, intron 2 of 10) intron (NM_001370094, intron 2 of 10) 55220 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr20-2589 chr20 38310797 38311007 + 9.07 0.000 intron (NM_001725, intron 4 of 14) MIRb|SINE|MIR 6752 NM_001725 671 Hs.529019 NM_001725 ENSG00000101425 BPI BPIFD1|rBPI bactericidal permeability increasing protein protein-coding chr12-7320 chr12 54485926 54486136 + 9.07 0.000 Intergenic L1PA16|LINE|L1 -11721 NM_005337 3071 Hs.182014 NM_005337 ENSG00000123338 NCKAP1L HEM1 NCK associated protein 1 like protein-coding chr17-4648 chr17 16937676 16937886 + 9.07 0.000 Intergenic Intergenic -4605 NR_147084 96597 NR_147084 TBC1D27P TBC1D27 TBC1 domain family member 27, pseudogene pseudo chr13-2110 chr13 87733353 87733563 + 9.07 0.000 Intergenic L2b|LINE|L2 60843 NM_015567 26050 Hs.591208 NM_015567 ENSG00000165300 SLITRK5 LRRC11|bA364G4.2 SLIT and NTRK like family member 5 protein-coding chr17-3373 chr17 81400351 81400561 + 9.07 0.000 TTS (NR_039894) TTS (NR_039894) 322 NR_039894 100616294 NR_039894 ENSG00000266392 MIR4740 - microRNA 4740 ncRNA chr11-4123 chr11 38460966 38461176 + 9.07 0.000 Intergenic Intergenic 185285 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA chrX-917 chrX 11351837 11352047 + 9.07 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) -33256 NR_049865 100847063 NR_049865 ENSG00000263652 MIR548AX - microRNA 548ax ncRNA chr9-5015 chr9 26469348 26469558 + 9.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 402778 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr15-2697 chr15 85348243 85348453 + 9.07 0.000 Intergenic Intergenic -32248 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr17-2623 chr17 2244696 2244906 + 9.07 0.000 intron (NM_017575, intron 8 of 18) intron (NM_017575, intron 8 of 18) -7954 NM_001256828 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr5-3638 chr5 139872781 139872991 + 9.07 0.000 intron (NM_013983, intron 3 of 10) intron (NM_013983, intron 3 of 10) 77078 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr5-1819 chr5 80064092 80064302 + 9.07 0.000 intron (NM_001306214, intron 8 of 21) L1MEd|LINE|L1 19468 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr3-9569 chr3 53859325 53859535 + 9.07 0.000 intron (NM_018725, intron 9 of 10) intron (NM_018725, intron 9 of 10) 12862 NM_018725 55540 Hs.654970 NM_018725 ENSG00000056736 IL17RB CRL4|EVI27|IL17BR|IL17RH1 interleukin 17 receptor B protein-coding chr8-4674 chr8 138768335 138768545 + 9.07 0.000 intron (NM_152888, intron 16 of 64) intron (NM_152888, intron 16 of 64) 145601 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr9-4358 chr9 131118894 131119104 + 9.07 0.000 intron (NM_001185095, intron 6 of 6) MIRb|SINE|MIR -6587 NM_001318324 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr8-6701 chr8 84278219 84278429 + 9.07 0.000 intron (NM_001354320, intron 2 of 9) THE1B-int|LTR|ERVL-MaLR 93658 NM_001354323 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr3-3503 chr3 13357231 13357441 + 9.07 0.000 intron (NM_024923, intron 16 of 39) L2a|LINE|L2 62986 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr13-2748 chr13 97972342 97972552 + 9.07 0.000 intron (NM_002271, intron 3 of 28) intron (NM_002271, intron 3 of 28) 18772 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr10-7052 chr10 84676513 84676723 + 9.07 0.000 Intergenic LTR33B|LTR|ERVL 251449 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr6-4051 chr6 133033638 133033848 + 9.07 0.000 Intergenic Intergenic -54337 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr4-3600 chr4 6749946 6750156 + 9.07 0.000 Intergenic Intergenic -32676 NM_014743 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr1-6736 chr1 66380453 66380663 + 9.07 0.000 Intergenic L2a|LINE|L2 26023 NM_001297442 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr16-3125 chr16 70788896 70789106 + 9.07 0.000 intron (NM_018052, intron 1 of 18) intron (NM_018052, intron 1 of 18) 12157 NM_001351157 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|TAX1BP2|TRX VAC14 component of PIKFYVE complex protein-coding chr4-3064 chr4 142879769 142879979 + 9.07 0.000 Intergenic L1MCa|LINE|L1 -33339 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr1-8160 chr1 16139740 16139950 + 9.07 0.000 intron (NM_004431, intron 3 of 16) intron (NM_004431, intron 3 of 16) 16224 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr14-4529 chr14 40163422 40163632 + 9.07 0.000 Intergenic THE1C|LTR|ERVL-MaLR -731027 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr4-8221 chr4 137016095 137016305 + 9.07 0.000 intron (NR_149105, intron 2 of 3) intron (NR_149105, intron 2 of 3) -177556 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr10-7743 chr10 32692000 32692210 + 9.07 0.000 intron (NM_001321115, intron 24 of 43) MER76-int|LTR|ERVL 209367 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr17-5871 chr17 68381396 68381606 + 9.07 0.000 intron (NM_001352899, intron 8 of 12) intron (NM_001352899, intron 8 of 12) -32122 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr4-7701 chr4 88630775 88630985 + 9.07 0.000 intron (NM_001318505, intron 3 of 8) intron (NM_001318505, intron 3 of 8) 38400 NM_001318505 8916 Hs.35804 NM_014606 ENSG00000138641 HERC3 - HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein-coding chr8-4346 chr8 100658304 100658514 + 9.07 0.000 Intergenic Intergenic -8744 NM_152628 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr7-8807 chr7 83065883 83066093 + 9.07 0.000 intron (NM_033026, intron 3 of 24) intron (NM_033026, intron 3 of 24) 96896 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr19-6561 chr19 19305194 19305404 + 9.07 0.000 intron (NM_172231, intron 4 of 13) intron (NM_172231, intron 4 of 13) 15210 NM_172231 57794 Hs.515274 NM_021164 ENSG00000105705 SUGP1 F23858|RBP|SF4 SURP and G-patch domain containing 1 protein-coding chr5-2909 chr5 129974188 129974398 + 9.07 0.000 intron (NM_175856, intron 2 of 2) intron (NM_175856, intron 2 of 2) 69828 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr2-10667 chr2 21096246 21096456 + 9.07 0.000 Intergenic Intergenic -27635 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr9-1962 chr9 90985283 90985493 + 9.07 0.000 Intergenic Intergenic 89744 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr6-2236 chr6 45830463 45830673 + 9.07 0.000 Intergenic MIRb|SINE|MIR 107029 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr6-4016 chr6 122055361 122055571 + 9.07 0.000 Intergenic Intergenic -344085 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr7-6802 chr7 29855187 29855397 + 9.07 0.000 intron (NM_001080529, intron 2 of 8) intron (NM_001080529, intron 2 of 8) 48738 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family member 3 protein-coding chr6-4733 chr6 66696403 66696613 + 9.07 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 908629 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr11-3830 chr11 68260742 68260952 + 9.07 0.000 TTS (NM_001300913) TTS (NM_001300913) 11126 NM_022338 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr12-4849 chr12 58262252 58262462 + 9.07 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 174465 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chrX-1839 chrX 104956952 104957162 + 9.07 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 263636 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr7-2153 chr7 47370324 47370534 + 9.07 0.000 intron (NM_022748, intron 16 of 30) intron (NM_022748, intron 16 of 30) 94374 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr1-16515 chr1 230537383 230537593 + 9.07 0.000 Intergenic MER54A|LTR|ERVL 58095 NR_146479 101927553 Hs.680219 NR_146479 ENSG00000232964 LINC01737 - long intergenic non-protein coding RNA 1737 ncRNA chr17-8086 chr17 55227676 55227886 + 9.07 0.000 Intergenic Intergenic -37179 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr14-4709 chr14 58749253 58749463 + 9.07 0.000 Intergenic Intergenic -78930 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr3-8248 chr3 49864835 49865045 + 9.07 0.000 intron (NM_024046, intron 1 of 10) intron (NM_024046, intron 1 of 10) 4966 NM_001320147 79012 Hs.145156 NM_024046 ENSG00000164076 CAMKV 1G5|VACAMKL CaM kinase like vesicle associated protein-coding chr5-3895 chr5 151606488 151606698 + 9.07 0.000 Intergenic Intergenic -37649 NM_001447 2196 Hs.591255 NM_001447 ENSG00000086570 FAT2 CDHF8|CDHR9|HFAT2|MEGF1|SCA45 FAT atypical cadherin 2 protein-coding chr6-4588 chr6 43674466 43674676 + 9.07 0.000 intron (NM_001193343, intron 4 of 4) intron (NM_001193343, intron 4 of 4) 13241 NM_001193343 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr3-3581 chr3 57182331 57182541 + 9.07 0.000 Intergenic MER52C|LTR|ERV1 -12119 NM_001318864 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding chrX-3403 chrX 7643244 7643454 + 9.07 0.000 Intergenic Intergenic -198913 NM_013452 26609 Hs.278906 NM_013452 ENSG00000182583 VCX VCX-10r|VCX-B1|VCX1|VCX10R|VCXB1 variable charge X-linked protein-coding chr18-2651 chr18 47087492 47087702 + 9.07 0.000 intron (NM_001353909, intron 12 of 12) L1PREC2|LINE|L1 -51980 NM_016427 51224 Hs.375035 NM_016427 ENSG00000206181 ELOA2 HsT832|TCEB3B|TCEB3L elongin A2 protein-coding chrX-573 chrX 55908031 55908241 + 9.07 0.000 promoter-TSS (NM_001324105) promoter-TSS (NM_001324105) 13 NM_001324105 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr3-6827 chr3 147712809 147713019 + 9.07 0.000 Intergenic L1PA7|LINE|L1 291587 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr3-2476 chr3 128551606 128551816 + 9.07 0.000 Intergenic Intergenic 24375 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr18-1381 chr18 47069177 47069387 + 9.07 0.000 exon (NM_001353901, exon 12 of 16) exon (NM_001353901, exon 12 of 16) -33665 NM_016427 51224 Hs.375035 NM_016427 ENSG00000206181 ELOA2 HsT832|TCEB3B|TCEB3L elongin A2 protein-coding chr17-4682 chr17 27519528 27519738 + 9.07 0.000 intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 47669 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr17-2485 chr17 76695321 76695531 + 9.07 0.000 intron (NM_198530, intron 1 of 3) intron (NM_198530, intron 1 of 3) -6539 NR_130928 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr13-3848 chr13 49809311 49809521 + 9.07 0.000 Intergenic Intergenic -16734 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr1-7865 chr1 98991819 98992029 + 9.07 0.000 intron (NM_001037317, intron 1 of 5) MIRb|SINE|MIR -12352 NR_033940 100129620 Hs.588631 NR_033940 ENSG00000232825 LOC100129620 - uncharacterized LOC100129620 ncRNA chr10-2900 chr10 122339205 122339415 + 9.07 0.000 Intergenic Intergenic -35398 NM_001330178 59338 Hs.643512 NM_021622 ENSG00000107679 PLEKHA1 TAPP1 pleckstrin homology domain containing A1 protein-coding chr7-3694 chr7 51019241 51019451 + 9.07 0.000 intron (NM_001346443, intron 11 of 11) intron (NM_001346443, intron 11 of 11) -225893 NM_001371008 chr5-8083 chr5 95786919 95787129 + 9.07 0.000 intron (NM_014899, intron 10 of 11) intron (NM_014899, intron 10 of 11) 35702 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr6-6667 chr6 163120465 163120675 + 9.07 0.000 intron (NM_001080379, intron 4 of 4) intron (NM_001080379, intron 4 of 4) -66409 NR_110871 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr22-2197 chr22 48580459 48580669 + 9.07 0.000 intron (NM_015381, intron 1 of 3) intron (NM_015381, intron 1 of 3) 4224 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr3-8403 chr3 102643309 102643519 + 9.07 0.000 Intergenic Intergenic 208399 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr7-4115 chr7 45364323 45364533 + 9.07 0.000 Intergenic Intergenic 206637 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr11-3550 chr11 24849282 24849492 + 9.07 0.000 intron (NM_001252010, intron 5 of 9) L1PA7|LINE|L1 352334 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr16-4717 chr16 82408278 82408488 + 9.07 0.000 Intergenic Intergenic -218586 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr7-4512 chr7 891933 892143 + 9.07 0.000 intron (NM_015949, intron 5 of 8) intron (NM_015949, intron 5 of 8) 15484 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 guided entry of tail-anchored proteins factor 4 protein-coding chr1-8559 chr1 167476588 167476798 + 9.07 0.000 intron (NM_000734, intron 1 of 7) AluJo|SINE|Alu 41836 NM_000734 919 Hs.156445 NM_000734 ENSG00000198821 CD247 CD3-ZETA|CD3H|CD3Q|CD3Z|IMD25|T3Z|TCRZ CD247 molecule protein-coding chr6-2474 chr6 43278522 43278732 + 9.07 0.000 intron (NM_032538, intron 13 of 14) intron (NM_032538, intron 13 of 14) -19633 NM_006672 10864 Hs.485438 NM_006672 ENSG00000137204 SLC22A7 NLT|OAT2|hOAT11 solute carrier family 22 member 7 protein-coding chr2-7238 chr2 224782062 224782272 + 9.07 0.000 intron (NM_001290263, intron 50 of 55) intron (NM_001290263, intron 50 of 55) 164882 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr7-5487 chr7 42691896 42692106 + 9.07 0.000 intron (NR_110833, intron 1 of 2) (TG)n|Simple_repeat|Simple_repeat 14446 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr15-2235 chr15 98519108 98519318 + 9.07 0.000 Intergenic Intergenic -4877 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding chr12-7418 chr12 58413792 58414002 + 9.07 0.000 Intergenic MER41-int|LTR|ERV1 -177805 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr6-4469 chr6 35826855 35827065 + 9.07 0.000 Intergenic Intergenic 21608 NM_182548 222662 Hs.367947 NM_182548 ENSG00000197753 LHFPL5 DFNB67|TMHS|dJ510O8.8 LHFPL tetraspan subfamily member 5 protein-coding chr19-4231 chr19 49237760 49237970 + 9.07 0.000 Intergenic L1PB1|LINE|L1 71003 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr1-8878 chr1 4692351 4692561 + 9.07 0.000 intron (NM_018836, intron 1 of 5) intron (NM_018836, intron 1 of 5) 37847 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr3-6441 chr3 103644519 103644729 + 9.07 0.000 Intergenic Intergenic -120508 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr1-12184 chr1 199684768 199684978 + 9.07 0.000 Intergenic Intergenic -342837 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr1-6086 chr1 110292426 110292636 + 9.07 0.000 intron (NR_036595, intron 2 of 3) intron (NR_036595, intron 2 of 3) 46640 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 RBM15-AS1 AS-RBM15 RBM15 antisense RNA 1 ncRNA chr8-2399 chr8 65446586 65446796 + 9.07 0.000 Intergenic Intergenic 115975 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr8-2198 chr8 141318182 141318392 + 9.07 0.000 Intergenic Intergenic -22262 NR_024441 731779 Hs.586414 NR_024441 ENSG00000253595 LINC01300 - long intergenic non-protein coding RNA 1300 ncRNA chrX-2321 chrX 55997092 55997302 + 9.07 0.000 intron (NM_001324105, intron 1 of 5) L1PA15|LINE|L1 88912 NM_001324104 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr4-6965 chr4 20428499 20428709 + 9.07 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 36415 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr19-6615 chr19 29444986 29445196 + 9.07 0.000 intron (NR_040029, intron 1 of 9) AluJr|SINE|Alu 80661 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr7-5149 chr7 6034572 6034782 + 9.07 0.000 intron (NM_001271700, intron 2 of 2) L2b|LINE|L2 3301 NM_001271700 100310846 Hs.744468 NM_001271700 ENSG00000157999 ANKRD61 - ankyrin repeat domain 61 protein-coding chr9-1582 chr9 84296417 84296627 + 9.07 0.000 intron (NM_022127, intron 9 of 18) intron (NM_022127, intron 9 of 18) 44236 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr7-6163 chr7 127792600 127792810 + 9.07 0.000 intron (NM_014390, intron 10 of 23) LTR50|LTR|ERVL 140511 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr14-2759 chr14 103558191 103558401 + 9.07 0.000 3' UTR (NM_001015049, exon 2 of 2) 3' UTR (NM_001015049, exon 2 of 2) 4024 NM_001015049 9529 Hs.5443 NM_004873 ENSG00000166170 BAG5 BAG-5 BCL2 associated athanogene 5 protein-coding chr14-3148 chr14 68879858 68880068 + 9.07 0.000 exon (NM_001130004, exon 18 of 22) exon (NM_001130004, exon 18 of 22) -83720 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr10-7116 chr10 97935684 97935894 + 9.07 0.000 intron (NM_001206528, intron 3 of 14) intron (NM_001206528, intron 3 of 14) -59892 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr19-2233 chr19 45297592 45297802 + 9.07 0.000 exon (NM_031417, exon 15 of 18) exon (NM_031417, exon 15 of 18) 25178 NM_001824 1158 Hs.334347 NM_001824 ENSG00000104879 CKM CKMM|CPK-M|M-CK creatine kinase, M-type protein-coding chr1-14962 chr1 88571606 88571816 + 9.07 0.000 intron (NR_110682, intron 1 of 3) L2|LINE|L2 -112433 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1-5301 chr1 217854223 217854433 + 9.07 0.000 intron (NM_138796, intron 9 of 10) Tigger17c|DNA|TcMar-Tigger -38572 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chr1-13084 chr1 181646197 181646407 + 9.07 0.000 intron (NM_001205293, intron 6 of 47) MER20|DNA|hAT-Charlie 162785 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr2-4194 chr2 197599626 197599836 + 9.07 0.000 intron (NM_144629, intron 7 of 8) intron (NM_144629, intron 7 of 8) 75856 NM_144629 130132 Hs.591615 NM_144629 ENSG00000162944 RFTN2 C2orf11|Raftlin-2 raftlin family member 2 protein-coding chr2-7698 chr2 31558952 31559162 + 9.07 0.000 intron (NM_000348, intron 1 of 4) intron (NM_000348, intron 1 of 4) 21881 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr8-5429 chr8 34929137 34929347 + 9.07 0.000 Intergenic Intergenic 145321 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr20-1295 chr20 53335463 53335673 + 9.07 0.000 intron (NM_173485, intron 2 of 2) intron (NM_173485, intron 2 of 2) 150285 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr16-2172 chr16 67653358 67653568 + 9.07 0.000 intron (NM_001317026, intron 30 of 37) CpG-9844 6797 NM_001082486 65057 Hs.78019 NM_022914 ENSG00000102977 ACD PIP1|PTOP|TINT1|TPP1 ACD shelterin complex subunit and telomerase recruitment factor protein-coding chr14-4447 chr14 33432416 33432626 + 9.07 0.000 intron (NM_001165893, intron 3 of 10) intron (NM_001165893, intron 3 of 10) -276416 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr7-4621 chr7 25844137 25844347 + 9.07 0.000 Intergenic Intergenic -54123 NR_157808 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr4-8647 chr4 176271411 176271621 + 9.07 0.000 Intergenic Intergenic -2294 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chr2-10168 chr2 86543464 86543674 + 9.07 0.000 intron (NM_001198954, intron 3 of 7) MER65A|LTR|ERV1 19874 NM_001193517 51652 Hs.591582 NM_016079 ENSG00000115561 CHMP3 CGI-149|NEDF|VPS24 charged multivesicular body protein 3 protein-coding chr6-997 chr6 16239658 16239868 + 9.07 0.000 intron (NM_006877, intron 1 of 8) intron (NM_006877, intron 1 of 8) 1176 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr2-14152 chr2 203841296 203841506 + 9.07 0.000 Intergenic Intergenic -26370 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr2-4033 chr2 108297409 108297619 + 9.07 0.000 intron (NM_001056, intron 3 of 7) intron (NM_001056, intron 3 of 7) 8619 NM_001056 6819 Hs.436123 NM_001056 ENSG00000198203 SULT1C2 ST1C1|ST1C2|SULT1C1|humSULTC2 sulfotransferase family 1C member 2 protein-coding chr1-13586 chr1 8803432 8803642 + 9.07 0.000 intron (NM_012102, intron 1 of 23) intron (NM_012102, intron 1 of 23) 14103 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr10-1937 chr10 7788586 7788796 + 9.07 0.000 promoter-TSS (NR_045609) promoter-TSS (NR_045609) 514 NM_001001973 509 Hs.271135 NM_005174 ENSG00000165629 ATP5F1C ATP5C|ATP5C1|ATP5CL1 ATP synthase F1 subunit gamma protein-coding chr2-12265 chr2 45404313 45404523 + 9.07 0.000 intron (NM_018079, intron 19 of 20) L2a|LINE|L2 -149477 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr5-1030 chr5 142357128 142357338 + 9.07 0.000 intron (NR_120664, intron 3 of 3) CpG 31940 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr2-5391 chr2 102864883 102865093 + 9.07 0.000 Intergenic Intergenic 30734 NR_135562 105373518 Hs.738351 NR_135562 ENSG00000277527 LINC01796 - long intergenic non-protein coding RNA 1796 ncRNA chr1-9745 chr1 54438428 54438638 + 9.07 0.000 Intergenic AluSx3|SINE|Alu -32139 NM_018070 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr10-2927 chr10 6504404 6504614 + 9.07 0.000 intron (NM_001282645, intron 3 of 16) intron (NM_001282645, intron 3 of 16) 75767 NM_001323266 5588 Hs.498570 NM_006257 ENSG00000065675 PRKCQ PRKCT|nPKC-theta protein kinase C theta protein-coding chr7-5704 chr7 70037602 70037812 + 9.07 0.000 intron (NM_015570, intron 2 of 18) MIR|SINE|MIR 439232 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr9-7072 chr9 126650774 126650984 + 9.07 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 36436 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr16-5317 chr16 74835470 74835680 + 9.07 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -60755 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr21-806 chr21 5235383 5235593 + 9.07 0.000 Intergenic Ricksha|DNA|MULE-MuDR -80830 NM_005049 5822 Hs.449076 NM_005049 ENSG00000241945 PWP2 EHOC-17|PWP2H|UTP1 PWP2 small subunit processome component protein-coding chr16-5106 chr16 88083062 88083272 + 9.07 0.000 Intergenic Intergenic 17818 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr14-1205 chr14 74568848 74569058 + 9.07 0.000 intron (NM_000428, intron 3 of 35) intron (NM_000428, intron 3 of 35) 43284 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr10-4254 chr10 133469893 133470103 + 9.07 0.000 TTS (NR_149718) TTS (NR_149718) 16070 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr21-564 chr21 44989394 44989604 + 9.07 0.000 TTS (NR_033840) TTS (NR_033840) 4587 NR_033840 727699 Hs.397403 NR_033840 ENSG00000234880 LINC00163 C21orf134|NCRNA00163|NLC1-A|NLC1A long intergenic non-protein coding RNA 163 ncRNA chr10-7569 chr10 17403287 17403497 + 9.07 0.000 intron (NR_034129, intron 2 of 2) intron (NR_034129, intron 2 of 2) 16456 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr16-2284 chr16 4271060 4271270 + 9.07 0.000 intron (NM_003223, intron 1 of 6) intron (NM_003223, intron 1 of 6) 1858 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chr12-1385 chr12 89160754 89160964 + 9.07 0.000 Intergenic Intergenic -141167 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr5-7842 chr5 68921612 68921822 + 9.07 0.000 Intergenic LTR12C|LTR|ERV1 108210 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr2-14228 chr2 210721495 210721705 + 9.07 0.000 Intergenic Intergenic 104029 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr6-1727 chr6 36961492 36961702 + 9.07 0.000 intron (NM_001199159, intron 4 of 7) intron (NM_001199159, intron 4 of 7) 6859 NM_153370 221476 Hs.25391 NM_153370 ENSG00000164530 PI16 CD364|CRISP9|MSMBBP|PSPBP peptidase inhibitor 16 protein-coding chr3-9841 chr3 78314308 78314518 + 9.07 0.000 Intergenic LFSINE_Vert|SINE|tRNA -265450 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr4-2389 chr4 51932408 51932618 + 9.07 0.000 Intergenic Intergenic 87850 NM_001024611 339977 Hs.661450 NM_001024611 ENSG00000188993 LRRC66 - leucine rich repeat containing 66 protein-coding chr22-1297 chr22 41411506 41411716 + 9.07 0.000 Intergenic Intergenic 29669 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr8-6533 chr8 68016696 68016906 + 9.07 0.000 intron (NM_024870, intron 1 of 39) AluJr|SINE|Alu 64755 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr18-2545 chr18 1536826 1537036 + 9.07 0.000 Intergenic AluY|SINE|Alu -177302 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr12-3228 chr12 57167177 57167387 + 9.07 0.000 intron (NM_002332, intron 18 of 88) intron (NM_002332, intron 18 of 88) -19663 NR_131939 105751187 Hs.609540 NR_131938 ENSG00000259125 LRP1-AS - LRP1 antisense RNA ncRNA chr18-2045 chr18 46577850 46578060 + 9.07 0.000 intron (NM_144612, intron 13 of 39) intron (NM_144612, intron 13 of 39) -18643 NM_001145472 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr9-5321 chr9 87137812 87138022 + 9.07 0.000 Intergenic Intergenic -10727 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr1-4883 chr1 34266460 34266670 + 9.07 0.000 Intergenic Intergenic 89658 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr9-1956 chr9 77634336 77634546 + 9.07 0.000 intron (NM_004297, intron 1 of 6) GA-rich|Low_complexity|Low_complexity 13881 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr5-4171 chr5 103428343 103428553 + 9.07 0.000 Intergenic Intergenic 113537 NR_104670 102467212 Hs.641885 NR_104670 ENSG00000248757 LINC02115 - long intergenic non-protein coding RNA 2115 ncRNA chr21-1667 chr21 26556785 26556995 + 9.07 0.000 intron (NR_135515, intron 3 of 3) intron (NR_135515, intron 3 of 3) 16396 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr1-4670 chr1 212953278 212953488 + 9.07 0.000 intron (NM_001301056, intron 2 of 7) L3|LINE|CR1 2842 NM_001136474 79805 Hs.96885 NM_024749 ENSG00000143494 VASH2 - vasohibin 2 protein-coding chr17-7146 chr17 78113462 78113672 + 9.07 0.000 exon (NM_001127198, exon 19 of 20) exon (NM_001127198, exon 19 of 20) -1768 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr6-4172 chr6 1531629 1531839 + 9.07 0.000 Intergenic L1ME4b|LINE|L1 -73797 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript ncRNA chr5-4635 chr5 34517238 34517448 + 9.07 0.000 Intergenic AluJr|SINE|Alu -138985 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr12-6154 chr12 5973390 5973600 + 9.07 0.000 intron (NM_000552, intron 43 of 51) intron (NM_000552, intron 43 of 51) -27263 NM_001278597 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr12-7978 chr12 110981598 110981808 + 9.07 0.000 Intergenic AluSx|SINE|Alu -23885 NR_135001 105369980 Hs.564357 NR_135001 ENSG00000258240 LOC105369980 - uncharacterized LOC105369980 ncRNA chr9-3520 chr9 34281905 34282115 + 9.07 0.000 intron (NM_194313, intron 6 of 12) L1MB7|LINE|L1 47258 NM_194313 347240 Hs.710246 NM_194313 ENSG00000186638 KIF24 C9orf48|bA571F15.4 kinesin family member 24 protein-coding chr1-8502 chr1 151815809 151816019 + 9.07 0.000 intron (NM_005060, intron 4 of 10) intron (NM_005060, intron 4 of 10) 10182 NM_001001523 6097 Hs.256022 NM_005060 ENSG00000143365 RORC IMD42|NR1F3|RORG|RZR-GAMMA|RZRG|TOR RAR related orphan receptor C protein-coding chr2-6750 chr2 38555409 38555619 + 9.07 0.000 Intergenic Intergenic -39774 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chrX-1788 chrX 79554244 79554454 + 9.07 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -186797 NM_001171581 9452 Hs.17109 NM_004867 ENSG00000078596 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding chr3-2462 chr3 108589473 108589683 + 9.07 0.000 promoter-TSS (NM_020890) promoter-TSS (NM_020890) -140 NM_020890 57650 Hs.591308 NM_020890 ENSG00000163507 CIP2A KIAA1524|p90 cell proliferation regulating inhibitor of protein phosphatase 2A protein-coding chr3-7240 chr3 195031068 195031278 + 9.07 0.000 Intergenic Intergenic -63415 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr13-3566 chr13 25632102 25632312 + 9.07 0.000 intron (NM_016529, intron 24 of 36) MER21B|LTR|ERVL 163433 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr9-6755 chr9 19611002 19611212 + 9.07 0.000 intron (NM_020344, intron 3 of 9) L2a|LINE|L2 175912 NM_001193288 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr6-4883 chr6 90340922 90341132 + 9.07 0.000 Intergenic MIR|SINE|MIR 28285 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr3-6761 chr3 141283510 141283720 + 9.07 0.000 intron (NM_001037172, intron 4 of 5) intron (NM_001037172, intron 4 of 5) -40571 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr1-6583 chr1 35708536 35708746 + 9.07 0.000 Intergenic Intergenic 8270 NM_001348691 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr7-5417 chr7 35349679 35349889 + 9.07 0.000 intron (NR_038864, intron 1 of 2) intron (NR_038864, intron 1 of 2) 35929 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr15-2385 chr15 56773336 56773546 + 9.07 0.000 Intergenic Intergenic -39355 NM_001288589 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding chr21-1534 chr21 45845763 45845973 + 9.07 0.000 intron (NM_001348243, intron 3 of 15) intron (NM_001348243, intron 3 of 15) -2282 NM_001348245 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr3-6566 chr3 122792938 122793148 + 9.07 0.000 intron (NM_001320728, intron 1 of 6) intron (NM_001320728, intron 1 of 6) 788 NM_001320728 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr10-4601 chr10 114139226 114139436 + 9.07 0.000 intron (NM_001321829, intron 7 of 16) AluSx|SINE|Alu 34848 NR_031747 100302224 NR_031747 ENSG00000284442 MIR2110 hsa-mir-2110|mir-2110 microRNA 2110 ncRNA chr3-6487 chr3 111735753 111735963 + 9.07 0.000 intron (NM_001185106, intron 4 of 4) MIRb|SINE|MIR 3362 NM_001134437 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr3-10163 chr3 116435447 116435657 + 9.07 0.000 intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) 9935 NM_001318915 4045 Hs.26409 NM_002338 ENSG00000185565 LSAMP IGLON3|LAMP limbic system associated membrane protein protein-coding chr17-2946 chr17 59505383 59505593 + 9.07 0.000 intron (NR_110813, intron 1 of 2) ERV3-16A3_I-int|LTR|ERVL 21369 NR_110813 101927728 Hs.569720 NR_110813 ENSG00000265313 LINC01476 - long intergenic non-protein coding RNA 1476 ncRNA chrX-1055 chrX 122625937 122626147 + 9.07 0.000 Intergenic Intergenic -558201 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr19-4314 chr19 1345603 1345813 + 9.07 0.000 Intergenic AluSq2|SINE|Alu -9251 NM_032853 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr12-3010 chr12 124399804 124400014 + 9.07 0.000 intron (NM_001077261, intron 17 of 47) MIRc|SINE|MIR -62667 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr10-5323 chr10 71152062 71152272 + 9.07 0.000 Intergenic Intergenic -60403 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr3-4845 chr3 153735181 153735391 + 9.07 0.000 intron (NR_146713, intron 1 of 6) MER57D|LTR|ERV1 27240 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr1-15298 chr1 117019475 117019685 + 9.07 0.000 intron (NM_001256109, intron 6 of 9) L2c|LINE|L2 17830 NM_004258 9398 Hs.654598 NM_004258 ENSG00000134256 CD101 EWI-101|IGSF2|V7 CD101 molecule protein-coding chrX-797 chrX 56729951 56730161 + 9.07 0.000 intron (NM_001348129, intron 1 of 2) intron (NM_001348129, intron 1 of 2) 813 NM_001348129 550643 Hs.355559 NM_001348129 ENSG00000204272 NBDY LINC01420|NoBody negative regulator of P-body association protein-coding chr2-8925 chr2 183461728 183461938 + 9.07 0.000 Intergenic L1PA7|LINE|L1 337390 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr19-5256 chr19 47370340 47370550 + 9.07 0.000 intron (NM_014681, intron 7 of 16) intron (NM_014681, intron 7 of 16) 21130 NM_014681 9704 Hs.151706 NM_014681 ENSG00000134815 DHX34 DDX34|HRH1 DExH-box helicase 34 protein-coding chr2-9079 chr2 202609888 202610098 + 9.07 0.000 Intergenic Intergenic -24976 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr5-5721 chr5 168747634 168747844 + 9.07 0.000 intron (NM_003062, intron 20 of 35) intron (NM_003062, intron 20 of 35) 20516 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr9-7771 chr9 77649402 77649612 + 9.07 0.000 Intergenic Intergenic -1185 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr10-7990 chr10 60481133 60481343 + 9.07 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -91363 NM_020987 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr4-8402 chr4 151900086 151900296 + 9.07 0.000 Intergenic HERVL32-int|LTR|ERVL -139168 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr2-6308 chr2 66212295 66212505 + 9.07 0.000 Intergenic L1ME1|LINE|L1 145928 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr7-4246 chr7 1752512 1752722 + 9.07 0.000 Intergenic AluJo|SINE|Alu -10307 NR_120508 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr8-1944 chr8 51888842 51889052 + 9.07 0.000 intron (NM_001363193, intron 1 of 5) intron (NM_001363193, intron 1 of 5) 10089 NM_052937 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr4-7989 chr4 114590204 114590414 + 9.07 0.000 Intergenic HERV1_I-int|LTR|ERV1 -8093 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr2-9429 chr2 232542720 232542930 + 9.07 0.000 intron (NM_005199, intron 6 of 11) intron (NM_005199, intron 6 of 11) 3133 NM_005199 1146 Hs.248101 NM_005199 ENSG00000196811 CHRNG ACHRG cholinergic receptor nicotinic gamma subunit protein-coding chr10-2963 chr10 61408231 61408441 + 9.07 0.000 3' UTR (NM_178505, exon 6 of 6) 3' UTR (NM_178505, exon 6 of 6) -44303 NR_120643 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr8-2759 chr8 115614555 115614765 + 9.07 0.000 intron (NM_001282902, intron 2 of 5) intron (NM_001282902, intron 2 of 5) 53353 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr16-952 chr16 84355070 84355280 + 9.07 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat -13348 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr17-3289 chr17 46944096 46944306 + 9.07 0.000 intron (NM_001321133, intron 6 of 6) intron (NM_001321133, intron 6 of 6) 21041 NR_148351 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr19-7065 chr19 54003128 54003338 + 9.07 0.000 intron (NM_145814, intron 3 of 3) L2c|LINE|L2 10945 NM_145814 59285 Hs.631560 NM_031897 ENSG00000130433 CACNG6 - calcium voltage-gated channel auxiliary subunit gamma 6 protein-coding chr2-8262 chr2 100426205 100426415 + 9.07 0.000 Intergenic Intergenic -8642 NM_004854 9486 Hs.516370 NM_004854 ENSG00000115526 CHST10 HNK-1ST|HNK1ST carbohydrate sulfotransferase 10 protein-coding chr1-11789 chr1 24231801 24232011 + 9.07 0.000 Intergenic MER5B|DNA|hAT-Charlie 31666 NR_027087 284632 Hs.638906 NR_027087 ENSG00000230023 LINC02800 - long intergenic non-protein coding RNA 2800 ncRNA chrX-2536 chrX 98828527 98828737 + 9.07 0.000 Intergenic Intergenic -1264097 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr2-12724 chr2 81163264 81163474 + 9.07 0.000 Intergenic Intergenic 303577 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr4-6909 chr4 15162706 15162916 + 9.07 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) 160330 NM_001177384 132864 Hs.656937 NM_182485 ENSG00000137449 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding chr8-4040 chr8 61354998 61355208 + 9.07 0.000 intron (NM_173519, intron 2 of 5) intron (NM_173519, intron 2 of 5) 67133 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr9-8945 chr9 137557839 137558049 + 9.07 0.000 intron (NM_001346372, intron 8 of 8) AluSx|SINE|Alu 6065 NM_032477 64975 Hs.44017 NM_032477 ENSG00000182154 MRPL41 BMRP|MRP-L27|MRPL27|PIG3|RPML27 mitochondrial ribosomal protein L41 protein-coding chr22-3244 chr22 43467327 43467537 + 9.07 0.000 intron (NM_001362786, intron 3 of 6) intron (NM_001362786, intron 3 of 6) -48822 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr13-1788 chr13 22729162 22729372 + 9.07 0.000 Intergenic L1PB1|LINE|L1 168914 NR_033774 646201 Hs.729338 NR_033774 BASP1P1 - BASP1 pseudogene 1 pseudo chr17-1512 chr17 49589171 49589381 + 9.07 0.000 Intergenic L2b|LINE|L2 13405 NM_007225 11248 Hs.55069 NM_007225 ENSG00000182575 NXPH3 NPH3 neurexophilin 3 protein-coding chr17-8111 chr17 57285094 57285304 + 9.07 0.000 intron (NM_001322250, intron 5 of 13) intron (NM_001322250, intron 5 of 13) 28180 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr11-2771 chr11 67050048 67050258 + 9.07 0.000 3' UTR (NM_177963, exon 8 of 8) 3' UTR (NM_177963, exon 8 of 8) 4510 NR_106920 102465518 NR_106920 ENSG00000283326 MIR6860 hsa-mir-6860 microRNA 6860 ncRNA chr2-13717 chr2 167109741 167109951 + 9.07 0.000 intron (NM_152381, intron 2 of 10) L1PA15|LINE|L1 31109 NR_046665 100874011 NR_046665 XIRP2-AS1 - XIRP2 antisense RNA 1 ncRNA chr12-7455 chr12 63170123 63170333 + 9.07 0.000 Intergenic Intergenic -17418 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr2-10594 chr2 524521 524731 + 9.07 0.000 Intergenic Intergenic -21179 NR_146470 101927362 Hs.385749 NR_146470 ENSG00000225942 LINC01875 - long intergenic non-protein coding RNA 1875 ncRNA chr10-5804 chr10 108620416 108620626 + 9.07 0.000 Intergenic Intergenic -551228 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chrX-1178 chrX 53359539 53359749 + 9.07 0.000 Intergenic Intergenic -38294 NM_001111125 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr20-3634 chr20 8641159 8641369 + 9.07 0.000 intron (NM_182734, intron 4 of 32) intron (NM_182734, intron 4 of 32) -189921 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr3-10075 chr3 108392296 108392506 + 9.07 0.000 intron (NM_014981, intron 37 of 41) intron (NM_014981, intron 37 of 41) 80616 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr5-6833 chr5 111154407 111154617 + 9.07 0.000 Intergenic Intergenic 62340 NM_139281 134430 Hs.533237 NM_139281 ENSG00000134987 WDR36 GLC1G|TA-WDRP|TAWDRP|UTP21 WD repeat domain 36 protein-coding chr15-2626 chr15 67906503 67906713 + 9.07 0.000 Intergenic MER21-int|LTR|ERVL -66563 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr3-11092 chr3 185409453 185409663 + 9.07 0.000 intron (NM_004721, intron 1 of 13) L1MA5A|LINE|L1 46422 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr3-5745 chr3 20512737 20512947 + 9.07 0.000 Intergenic Intergenic 170374 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr12-1629 chr12 112399571 112399781 + 9.07 0.000 Intergenic AluSg|SINE|Alu 9609 NM_001320140 6128 Hs.528668 NM_000970 ENSG00000089009 RPL6 L6|SHUJUN-2|TAXREB107|TXREB1 ribosomal protein L6 protein-coding chr8-1072 chr8 123025817 123026027 + 9.07 0.000 promoter-TSS (NM_001363963) promoter-TSS (NM_001363963) -150 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chrX-1438 chrX 63815887 63816097 + 9.07 0.000 Intergenic Intergenic -29905 NR_031567 100302115 NR_031567 ENSG00000222532 MIR1468 MIRN1468|hsa-mir-1468|mir-1468 microRNA 1468 ncRNA chr16-4396 chr16 50153577 50153787 + 9.07 0.000 exon (NM_001365323, exon 2 of 13) exon (NM_001365323, exon 2 of 13) 201 NM_001365324 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr17-3250 chr17 30225113 30225323 + 9.07 0.000 intron (NM_001045, intron 1 of 14) intron (NM_001045, intron 1 of 14) 10479 NM_001045 6532 Hs.29792 NM_001045 ENSG00000108576 SLC6A4 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT solute carrier family 6 member 4 protein-coding chr10-6966 chr10 67877961 67878171 + 9.07 0.000 Intergenic LTR56|LTR|ERV1 -6590 NM_012238 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr1-13934 chr1 22982726 22982936 + 9.07 0.000 Intergenic Intergenic -9965 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr11-4721 chr11 70133725 70133935 + 9.07 0.000 intron (NM_018043, intron 11 of 25) intron (NM_018043, intron 11 of 25) 48420 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr1-15282 chr1 115530673 115530883 + 9.07 0.000 Intergenic LTR37B|LTR|ERV1 -111192 NM_001172411 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr20-1105 chr20 3218419 3218629 + 9.07 0.000 non-coding (NR_052000, exon 5 of 7) non-coding (NR_052000, exon 5 of 7) 9026 NM_181493 3704 Hs.415299 NM_033453 ENSG00000125877 ITPA C20orf37|HLC14-06-P|ITPase|My049|NTPase|dJ794I6.3 inosine triphosphatase protein-coding chr4-5052 chr4 142413530 142413740 + 9.07 0.000 intron (NM_001331040, intron 5 of 25) intron (NM_001331040, intron 5 of 25) 432900 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chrX-1822 chrX 100214203 100214413 + 9.07 0.000 Intergenic L1PA7|LINE|L1 195965 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr16-5290 chr16 65794260 65794470 + 9.07 0.000 Intergenic MER20|DNA|hAT-Charlie -218065 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr18-2657 chr18 48163418 48163628 + 9.07 0.000 intron (NM_001371285, intron 3 of 5) intron (NM_001371285, intron 3 of 5) -26375 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr12-5663 chr12 89140760 89140970 + 9.07 0.000 Intergenic Intergenic -121173 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr8-5069 chr8 35401088 35401298 + 9.07 0.000 intron (NM_080872, intron 1 of 16) intron (NM_080872, intron 1 of 16) -143199 NM_001322818 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr3-5226 chr3 89216557 89216767 + 9.07 0.000 intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 109041 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr6-6547 chr6 132650169 132650379 + 9.07 0.000 Intergenic L2|LINE|L2 -4248 NM_138327 134864 Hs.375030 NM_138327 ENSG00000146399 TAAR1 TA1|TAR1|TRAR1 trace amine associated receptor 1 protein-coding chr13-2181 chr13 19089292 19089502 + 9.07 0.000 intron (NR_146902, intron 3 of 4) MER53|DNA|hAT 28886 NR_146902 107984132 Hs.614937 NR_146902 LOC107984132 - uncharacterized LOC107984132 ncRNA chr9-8315 chr9 114225927 114226137 + 9.07 0.000 intron (NM_032888, intron 14 of 60) intron (NM_032888, intron 14 of 60) 16598 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr16-3809 chr16 50402634 50402844 + 9.07 0.000 Intergenic L2b|LINE|L2 -7606 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA chr3-9834 chr3 76859570 76859780 + 9.07 0.000 Intergenic Intergenic -180424 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr1-5027 chr1 79663325 79663535 + 9.07 0.000 Intergenic MIRc|SINE|MIR -656700 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr1-6710 chr1 56449329 56449539 + 9.07 0.000 Intergenic MIRc|SINE|MIR 34471 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr12-3788 chr12 54854393 54854603 + 9.07 0.000 promoter-TSS (NM_058173) promoter-TSS (NM_058173) -18 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr9-4130 chr9 135769949 135770159 + 9.07 0.000 exon (NM_020822, exon 16 of 31) exon (NM_020822, exon 16 of 31) 67869 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr6-4576 chr6 43245301 43245511 + 9.07 0.000 intron (NM_032538, intron 1 of 14) intron (NM_032538, intron 1 of 14) 1925 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr3-7168 chr3 186706770 186706980 + 9.07 0.000 Intergenic Intergenic -10484 NM_001102416 3827 Hs.77741 NM_000893 ENSG00000113889 KNG1 BDK|BK|HMWK|KNG kininogen 1 protein-coding chr16-3510 chr16 20113795 20114005 + 9.07 0.000 Intergenic Intergenic -40122 NM_001318483 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr10-9113 chr10 126872969 126873179 + 9.07 0.000 Intergenic Intergenic -32335 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr1-12924 chr1 117986773 117986983 + 9.07 0.000 intron (NM_206996, intron 40 of 48) MER39|LTR|ERV1 57139 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding chr11-8869 chr11 13960336 13960546 + 9.07 0.000 Intergenic MIRc|SINE|MIR -2282 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr12-3073 chr12 9699459 9699669 + 9.07 0.000 TTS (NR_036693) TTS (NR_036693) 29851 NM_013269 29121 Hs.268326 NM_013269 ENSG00000069493 CLEC2D CLAX|LLT1|OCIL C-type lectin domain family 2 member D protein-coding chr3-8547 chr3 145873552 145873762 + 9.07 0.000 Intergenic Intergenic 195528 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr3-10425 chr3 131218440 131218650 + 9.07 0.000 intron (NM_001353043, intron 14 of 17) MLT1B|LTR|ERVL-MaLR -143300 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr16-2593 chr16 88342437 88342647 + 9.07 0.000 Intergenic Intergenic -84929 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr17-4402 chr17 31938250 31938460 + 9.07 0.000 intron (NM_001321207, intron 1 of 14) intron (NM_001321207, intron 1 of 14) 1348 NM_015355 23512 Hs.462732 NM_015355 ENSG00000178691 SUZ12 CHET9|JJAZ1 SUZ12 polycomb repressive complex 2 subunit protein-coding chr3-5878 chr3 36894011 36894221 + 9.07 0.000 intron (NM_001329998, intron 5 of 23) intron (NM_001329998, intron 5 of 23) 50938 NM_001329998 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding chr8-4520 chr8 122497896 122498106 + 9.07 0.000 intron (NR_131202, intron 2 of 3) LTR33|LTR|ERVL 70643 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr7-7353 chr7 54398352 54398562 + 9.07 0.000 Intergenic AluJr|SINE|Alu 67760 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr6-5688 chr6 111760336 111760546 + 9.07 0.000 promoter-TSS (NM_001370529) promoter-TSS (NM_001370529) -524 NM_001370529 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chrX-2424 chrX 77326470 77326680 + 9.07 0.000 Intergenic L1PA11|LINE|L1 -120814 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr10-7423 chr10 5501083 5501293 + 9.07 0.000 Intergenic Intergenic -1618 NM_017422 51806 Hs.180142 NM_017422 ENSG00000178372 CALML5 CLSP calmodulin like 5 protein-coding chr22-1951 chr22 48647543 48647753 + 9.07 0.000 intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) 71308 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr3-3111 chr3 146142683 146142893 + 9.07 0.000 intron (NM_182943, intron 1 of 19) intron (NM_182943, intron 1 of 19) 18396 NM_182943 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr6-2259 chr6 56955193 56955403 + 9.07 0.000 promoter-TSS (NM_001144769) promoter-TSS (NM_001144769) 191 NM_152731 221336 Hs.582993 NM_152731 ENSG00000151917 BEND6 C6orf65 BEN domain containing 6 protein-coding chr5-3503 chr5 176832056 176832266 + 9.07 0.000 intron (NM_133369, intron 1 of 14) AluSx1|SINE|Alu 21602 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 netrin receptor A protein-coding chr3-6923 chr3 157949169 157949379 + 9.07 0.000 Intergenic Intergenic 156889 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr14-4070 chr14 61717325 61717535 + 9.07 0.000 intron (NR_144368, intron 1 of 2) intron (NR_144368, intron 1 of 2) 19808 NM_001243084 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr6-1866 chr6 54194146 54194356 + 9.07 0.000 intron (NM_001281746, intron 10 of 11) intron (NM_001281746, intron 10 of 11) 82808 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr10-5368 chr10 73554653 73554863 + 9.07 0.000 intron (NR_146997, intron 4 of 21) L1MC5|LINE|L1 -1418 NR_135250 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chrX-2602 chrX 106590714 106590924 + 9.07 0.000 Intergenic Intergenic -21111 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr2-11131 chr2 137255820 137256030 + 9.07 0.000 intron (NM_001316349, intron 10 of 27) AluJr|SINE|Alu 490380 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr14-1358 chr14 103109673 103109883 + 9.07 0.000 intron (NM_001077594, intron 10 of 10) intron (NM_001077594, intron 10 of 10) 9634 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3 like 4 protein-coding chr3-4893 chr3 180866363 180866573 + 9.07 0.000 intron (NR_109986, intron 1 of 13) AluJo|SINE|Alu 3710 NR_109986 101928882 Hs.734668 NR_109986 ENSG00000285336 LOC101928882 - uncharacterized LOC101928882 ncRNA chr11-7437 chr11 117099055 117099265 + 9.07 0.000 promoter-TSS (NM_025164) promoter-TSS (NM_025164) -732 NM_001366687 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr1-12444 chr1 15122464 15122674 + 9.07 0.000 intron (NR_027136, intron 2 of 4) intron (NR_027136, intron 2 of 4) 29895 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr18-1300 chr18 66542641 66542851 + 9.07 0.000 intron (NM_001271028, intron 7 of 9) MER1B|DNA|hAT-Charlie 61344 NM_001271028 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr19-1699 chr19 17448655 17448865 + 9.07 0.000 promoter-TSS (NM_001190844) promoter-TSS (NM_001190844) -92 NM_001190844 100130519 Hs.436603 NM_001190844 ENSG00000188051 TMEM221 - transmembrane protein 221 protein-coding chr1-7738 chr1 31733191 31733401 + 9.07 0.000 intron (NM_001294336, intron 24 of 31) intron (NM_001294336, intron 24 of 31) 25439 NR_036216 100423028 NR_036216 ENSG00000266580 MIR4254 - microRNA 4254 ncRNA chr7-5179 chr7 7564509 7564719 + 9.07 0.000 intron (NR_110084, intron 1 of 4) L2a|LINE|L2 1451 NR_110084 101927391 Hs.223837 NR_110084 LOC101927391 - uncharacterized LOC101927391 ncRNA chr4-5517 chr4 95465016 95465226 + 9.07 0.000 intron (NM_003728, intron 1 of 15) intron (NM_003728, intron 1 of 15) 83852 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr13-3374 chr13 80524159 80524369 + 9.07 0.000 Intergenic L2a|LINE|L2 -183138 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr4-5304 chr4 178535364 178535574 + 9.07 0.000 Intergenic MER47A|DNA|TcMar-Tigger -627533 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr12-5605 chr12 49642212 49642422 + 9.07 0.000 exon (NM_012272, exon 19 of 25) exon (NM_012272, exon 19 of 25) 11773 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr20-1487 chr20 17622184 17622394 + 9.07 0.000 intron (NM_001365613, intron 13 of 24) intron (NM_001365613, intron 13 of 24) 52214 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr20-4054 chr20 37798690 37798900 + 9.07 0.000 intron (NM_001281495, intron 11 of 16) intron (NM_001281495, intron 11 of 16) -104332 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr4-2042 chr4 7594235 7594445 + 9.07 0.000 intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) 134312 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr18-3086 chr18 33880677 33880887 + 9.07 0.000 intron (NM_001353232, intron 9 of 9) intron (NM_001353232, intron 9 of 9) 167830 NM_001353236 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr6-4710 chr6 57021185 57021395 + 9.07 0.000 intron (NM_152731, intron 6 of 6) intron (NM_152731, intron 6 of 6) -25242 NM_001286275 57691 Hs.709521 NM_020931 ENSG00000168116 KIAA1586 - KIAA1586 protein-coding chr10-7812 chr10 42913555 42913765 + 9.07 0.000 Intergenic Intergenic 42139 NR_134479 101929445 Hs.376403 NR_134479 ENSG00000234944 LINC02623 - long intergenic non-protein coding RNA 2623 ncRNA chr7-6122 chr7 122277733 122277943 + 9.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR -25820 NR_036484 154860 Hs.664204 NR_036484 ENSG00000230316 FEZF1-AS1 - FEZF1 antisense RNA 1 ncRNA chr11-8366 chr11 83042956 83043166 + 9.07 0.000 intron (NM_014488, intron 1 of 5) MLT1H|LTR|ERVL-MaLR -1463 NR_033347 100379250 Hs.725115 NR_033347 ENSG00000207221 SNORA70E U70E small nucleolar RNA, H/ACA box 70E snoRNA chr9-6397 chr9 34504745 34504955 + 9.07 0.000 intron (NM_001281428, intron 12 of 19) intron (NM_001281428, intron 12 of 19) 18140 NM_198573 375704 Hs.522085 NM_198573 ENSG00000168913 ENHO C9orf165|UNQ470 energy homeostasis associated protein-coding chr2-8946 chr2 187342092 187342302 + 9.07 0.000 3' UTR (NM_001271751, exon 14 of 14) 3' UTR (NM_001271751, exon 14 of 14) 106055 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr6-4399 chr6 26003303 26003513 + 9.07 0.000 Intergenic Intergenic 14404 NM_005325 3024 Hs.150206 NM_005325 ENSG00000124610 HIST1H1A H1.1|H1A|H1F1|HIST1 histone cluster 1 H1 family member a protein-coding chr6-3075 chr6 75611462 75611672 + 9.07 0.000 intron (NM_001100409, intron 1 of 22) intron (NM_001100409, intron 1 of 22) 9687 NM_015571 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding chr2-11612 chr2 3291204 3291414 + 9.07 0.000 intron (NM_001330530, intron 3 of 9) intron (NM_001330530, intron 3 of 9) 86509 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr5-2159 chr5 106292695 106292905 + 9.07 0.000 Intergenic L1MEi|LINE|L1 718214 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr2-8438 chr2 120348841 120349051 + 9.07 0.000 intron (NM_002193, intron 1 of 1) intron (NM_002193, intron 1 of 1) 2810 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr10-8872 chr10 112698974 112699184 + 9.07 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) 64909 NR_036177 100422909 NR_036177 ENSG00000264763 MIR4295 - microRNA 4295 ncRNA chr1-6992 chr1 167401508 167401718 + 9.07 0.000 intron (NM_001198783, intron 13 of 15) intron (NM_001198783, intron 13 of 15) 72543 NM_001198783 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chrX-4781 chrX 97586846 97587056 + 9.07 0.000 intron (NM_006729, intron 26 of 26) intron (NM_006729, intron 26 of 26) -22416 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr9-3574 chr9 73985314 73985524 + 9.07 0.000 Intergenic L1PA14|LINE|L1 -386112 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr4-4679 chr4 85409373 85409583 + 9.07 0.000 Intergenic Intergenic -65672 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr5-6694 chr5 63559277 63559487 + 9.07 0.000 Intergenic Intergenic 402910 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr6-2697 chr6 36351564 36351774 + 9.07 0.000 Intergenic Intergenic -14781 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chr11-9347 chr11 46853652 46853862 + 9.07 0.000 intron (NR_038909, intron 2 of 2) intron (NR_038909, intron 2 of 2) 7346 NR_038909 100507401 Hs.675301 NR_038909 ENSG00000247675 LRP4-AS1 - LRP4 antisense RNA 1 ncRNA chr5-3413 chr5 148314052 148314262 + 9.07 0.000 exon (NM_032566, exon 3 of 4) exon (NM_032566, exon 3 of 4) 1734 NM_032566 84651 Hs.244569 NM_032566 ENSG00000145879 SPINK7 ECG2|ECRG2 serine peptidase inhibitor, Kazal type 7 (putative) protein-coding chr7-4702 chr7 45195430 45195640 + 9.07 0.000 Intergenic Intergenic 37744 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr9-3591 chr9 79681525 79681735 + 9.07 0.000 intron (NR_104239, intron 9 of 20) intron (NR_104239, intron 9 of 20) 108453 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr2-3728 chr2 237402776 237402986 + 9.07 0.000 intron (NM_057165, intron 1 of 7) intron (NM_057165, intron 1 of 7) 11283 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr19-3846 chr19 17015327 17015537 + 9.07 0.000 intron (NM_015692, intron 3 of 41) intron (NM_015692, intron 3 of 41) 11378 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr7-8065 chr7 23349477 23349687 + 9.07 0.000 intron (NM_006547, intron 6 of 14) intron (NM_006547, intron 6 of 14) -46864 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA chr1-10100 chr1 97820118 97820328 + 9.07 0.000 intron (NM_000110, intron 3 of 22) intron (NM_000110, intron 3 of 22) 23302 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr1-8974 chr1 9671412 9671622 + 9.07 0.000 TTS (NR_126366) TTS (NR_126366) 16057 NR_126367 101929074 Hs.661762 NR_126366 ENSG00000231789 PIK3CD-AS2 - PIK3CD antisense RNA 2 ncRNA chr2-3392 chr2 26913753 26913963 + 9.07 0.000 intron (NM_020134, intron 2 of 12) intron (NM_020134, intron 2 of 12) -56779 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr6-4388 chr6 24667640 24667850 + 9.07 0.000 promoter-TSS (NM_016614) promoter-TSS (NM_016614) 668 NM_018473 55856 Hs.731605 NM_018473 ENSG00000112304 ACOT13 HT012|PNAS-27|THEM2 acyl-CoA thioesterase 13 protein-coding chr1-9494 chr1 37244304 37244514 + 9.07 0.000 Intergenic Intergenic 82846 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr10-1290 chr10 33005628 33005838 + 9.07 0.000 Intergenic Intergenic -47503 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr3-10083 chr3 109114964 109115174 + 9.07 0.000 intron (NM_014429, intron 1 of 27) intron (NM_014429, intron 1 of 27) 3065 NM_014429 27136 Hs.591296 NM_014429 ENSG00000114487 MORC1 CT33|MORC|ZCW6 MORC family CW-type zinc finger 1 protein-coding chr16-3403 chr16 81816433 81816643 + 9.07 0.000 intron (NM_002661, intron 2 of 32) AluJo|SINE|Alu 37247 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr15-2531 chr15 42145469 42145679 + 9.07 0.000 intron (NM_213600, intron 16 of 19) intron (NM_213600, intron 16 of 19) 11062 NR_033151 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr6-3092 chr6 85866155 85866365 + 9.07 0.000 Intergenic HERV3-int|LTR|ERV1 -187527 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr4-2771 chr4 16722755 16722965 + 9.07 0.000 intron (NM_001304435, intron 2 of 7) Tigger5b|DNA|TcMar-Tigger 175785 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr15-5213 chr15 96313002 96313212 + 9.07 0.000 intron (NR_102744, intron 1 of 1) intron (NR_102744, intron 1 of 1) -12939 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr3-4891 chr3 180403234 180403444 + 9.07 0.000 Intergenic MER44D|DNA|TcMar-Tigger -10834 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr13-2947 chr13 42631793 42632003 + 9.07 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 57746 NM_003701 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr17-2833 chr17 17795578 17795788 + 9.07 0.000 exon (NM_030665, exon 3 of 6) exon (NM_030665, exon 3 of 6) -16154 NR_024007 140771 Hs.352643 NM_144774 ENSG00000226746 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 ncRNA chr4-6444 chr4 137623247 137623457 + 9.07 0.000 Intergenic Intergenic 77621 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr17-5603 chr17 48221997 48222207 + 9.07 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -65591 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr11-1627 chr11 68128389 68128599 + 9.07 0.000 Intergenic CpG -7103 NM_212469 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr11-4486 chr11 110832423 110832633 + 9.07 0.000 Intergenic L2a|LINE|L2 -119339 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr3-11078 chr3 184871595 184871805 + 9.07 0.000 intron (NM_001009921, intron 20 of 46) intron (NM_001009921, intron 20 of 46) 59193 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr17-1686 chr17 8858189 8858399 + 9.07 0.000 intron (NM_001010855, intron 1 of 19) intron (NM_001010855, intron 1 of 19) 9383 NM_001010855 146850 Hs.255809 NM_001010855 ENSG00000276231 PIK3R6 C17orf38|HsT41028|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase regulatory subunit 6 protein-coding chr6-4509 chr6 37570561 37570771 + 9.07 0.000 Intergenic L2c|LINE|L2 -15244 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr12-4577 chr12 30507252 30507462 + 9.07 0.000 Intergenic MER21B|LTR|ERVL 169887 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr20-810 chr20 38044024 38044234 + 9.07 0.000 intron (NM_021215, intron 2 of 6) MER68|LTR|ERVL 10383 NM_021215 58490 Hs.278839 NM_021215 ENSG00000101413 RPRD1B C20orf77|CREPT|K-H|Kub5-Hera|NET60|dJ1057B20.2 regulation of nuclear pre-mRNA domain containing 1B protein-coding chr14-2204 chr14 101313752 101313962 + 9.07 0.000 Intergenic Intergenic 94065 NR_126006 338002 Hs.124848 NR_126006 ENSG00000259023 LINC00524 C14orf71 long intergenic non-protein coding RNA 524 ncRNA chr1-8267 chr1 36156834 36157044 + 9.07 0.000 promoter-TSS (NM_001270895) promoter-TSS (NM_001270895) 779 NM_018067 55700 Hs.356096 NM_018067 ENSG00000116871 MAP7D1 PARCC1|RPRC1 MAP7 domain containing 1 protein-coding chr6-6097 chr6 149962535 149962745 + 9.07 0.000 Intergenic Intergenic -1303 NM_001317089 80329 Hs.653255 NM_025218 ENSG00000111981 ULBP1 N2DL-1|NKG2DL1|RAET1I UL16 binding protein 1 protein-coding chrX-1128 chrX 27102002 27102212 + 9.07 0.000 Intergenic L2|LINE|L2 361234 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr5-8248 chr5 111254962 111255172 + 9.07 0.000 intron (NM_001744, intron 1 of 10) intron (NM_001744, intron 1 of 10) 30683 NM_001323376 814 Hs.438801 NM_001744 ENSG00000152495 CAMK4 CaMK IV|CaMK-GR|CaMKIV|caMK calcium/calmodulin dependent protein kinase IV protein-coding chr13-2418 chr13 44843489 44843699 + 9.07 0.000 Intergenic MER90a|LTR|ERV1 -33964 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr4-7305 chr4 54118843 54119053 + 9.07 0.000 Intergenic AluJr|SINE|Alu 18785 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr10-7640 chr10 24457489 24457699 + 9.07 0.000 intron (NM_001321681, intron 1 of 13) AluJr|SINE|Alu 8180 NM_001321681 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr19-2422 chr19 39351563 39351773 + 9.07 0.000 intron (NM_018028, intron 2 of 15) MLT1K|LTR|ERVL-MaLR 9209 NM_001303614 55095 Hs.612332 NM_018028 ENSG00000179134 SAMD4B SMGB|Smaug2 sterile alpha motif domain containing 4B protein-coding chr17-5826 chr17 65327991 65328201 + 9.07 0.000 Intergenic Intergenic -129445 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr22-1995 chr22 25337140 25337350 + 9.07 0.000 Intergenic Intergenic 18988 NR_029395 91353 Hs.651077 NM_001013618 IGLL3P 16.1|IGLL3 immunoglobulin lambda like polypeptide 3, pseudogene pseudo chr20-2622 chr20 41482658 41482868 + 9.07 0.000 intron (NM_032221, intron 16 of 36) intron (NM_032221, intron 16 of 36) -115945 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chrX-1463 chrX 107936649 107936859 + 9.07 0.000 promoter-TSS (NR_110395) promoter-TSS (NR_110395) -774 NR_110395 101928335 Hs.657090 NR_110395 ENSG00000236064 LOC101928335 - uncharacterized LOC101928335 ncRNA chr11-7504 chr11 4696422 4696632 + 9.07 0.000 intron (NM_030774, intron 1 of 1) intron (NM_030774, intron 1 of 1) 1326 NM_030774 81285 Hs.501758 NM_030774 ENSG00000167332 OR51E2 HPRAJ|OR51E3P|OR52A2|PSGR olfactory receptor family 51 subfamily E member 2 protein-coding chr1-13318 chr1 239947980 239948190 + 9.07 0.000 Intergenic Intergenic -48213 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr4-3083 chr4 149512752 149512962 + 9.07 0.000 intron (NM_001363507, intron 12 of 13) intron (NM_001363507, intron 12 of 13) 302986 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr10-8634 chr10 98292835 98293045 + 9.07 0.000 Intergenic L1ME1|LINE|L1 -24746 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr1-3480 chr1 58909258 58909468 + 9.07 0.000 Intergenic Intergenic -111113 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr12-5925 chr12 69475418 69475628 + 9.07 0.000 intron (NM_001278357, intron 1 of 6) MamSINE1|SINE|tRNA-RTE 5135 NM_001278355 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding chr14-5211 chr14 96042444 96042654 + 9.07 0.000 intron (NM_001289139, intron 2 of 2) intron (NM_001289139, intron 2 of 2) 3187 NM_001282463 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr14-1927 chr14 21047550 21047760 + 9.07 0.000 intron (NM_001282211, intron 1 of 14) intron (NM_001282211, intron 1 of 14) 5293 NM_032572 84659 Hs.525206 NM_032572 ENSG00000165799 RNASE7 RAE1 ribonuclease A family member 7 protein-coding chr10-7575 chr10 18005459 18005669 + 9.07 0.000 intron (NR_038419, intron 3 of 4) intron (NR_038419, intron 3 of 4) 4998 NR_038419 100129213 Hs.568816 NR_038419 ENSG00000226083 SLC39A12-AS1 - SLC39A12 antisense RNA 1 ncRNA chr8-1767 chr8 52934721 52934931 + 9.07 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -5082 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr12-4791 chr12 54164196 54164406 + 9.07 0.000 Intergenic Intergenic 24656 NM_001351247 23583 Hs.632721 NM_014311 ENSG00000123415 SMUG1 FDG|HMUDG|UNG3 single-strand-selective monofunctional uracil-DNA glycosylase 1 protein-coding chr11-1887 chr11 12353438 12353648 + 9.07 0.000 intron (NM_032867, intron 7 of 8) intron (NM_032867, intron 7 of 8) -24028 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr5-7705 chr5 57152148 57152358 + 9.07 0.000 Intergenic Intergenic -21695 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr9-3003 chr9 94148438 94148648 + 9.07 0.000 Intergenic Intergenic -27414 NR_029476 406881 NR_029476 ENSG00000199165 MIRLET7A1 LET7A1|MIRNLET7A1|let-7a-1 microRNA let-7a-1 ncRNA chr14-4149 chr14 75339405 75339615 + 9.07 0.000 Intergenic L2b|LINE|L2 45106 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr4-2719 chr4 4271815 4272025 + 9.07 0.000 intron (NM_017816, intron 8 of 9) L1MD1|LINE|L1 18101 NM_001145725 55646 Hs.425427 NM_017816 ENSG00000145220 LYAR ZC2HC2|ZLYAR Ly1 antibody reactive protein-coding chr1-7543 chr1 182389062 182389272 + 9.07 0.000 intron (NM_001033044, intron 1 of 6) intron (NM_001033044, intron 1 of 6) 2237 NM_001033056 2752 Hs.132016 NM_002065 ENSG00000135821 GLUL GLNS|GS|PIG43|PIG59 glutamate-ammonia ligase protein-coding chr16-2995 chr16 26981609 26981819 + 9.07 0.000 Intergenic Intergenic -85213 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr10-2275 chr10 76414 76624 + 9.07 0.000 Intergenic CpG -27281 NM_177987 347688 Hs.532659 NM_177987 ENSG00000261456 TUBB8 OOMD|OOMD2|bA631M21.2 tubulin beta 8 class VIII protein-coding chr11-2794 chr11 86735491 86735701 + 9.07 0.000 Intergenic Intergenic -55475 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr10-3840 chr10 3773611 3773821 + 9.07 0.000 Intergenic Intergenic 11493 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr1-13857 chr1 20555103 20555313 + 9.07 0.000 TTS (NM_207334) TTS (NM_207334) 2635 NM_207334 163933 Hs.429179 NM_207334 ENSG00000183114 FAM43B - family with sequence similarity 43 member B protein-coding chr9-7148 chr9 133620325 133620535 + 9.07 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -15933 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr11-3900 chr11 111745387 111745597 + 9.07 0.000 intron (NM_181699, intron 11 of 15) LTR101_Mam|LTR|ERVL 20897 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr21-802 chr21 46362942 46363152 + 9.07 0.000 intron (NM_001315529, intron 13 of 46) intron (NM_001315529, intron 13 of 46) 38380 NM_001315529 5116 Hs.474069 NM_006031 ENSG00000160299 PCNT KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4 pericentrin protein-coding chr8-6033 chr8 23554222 23554432 + 9.07 0.000 intron (NM_001317813, intron 2 of 4) MIRb|SINE|MIR 25371 NM_016612 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr18-845 chr18 22882283 22882493 + 9.07 0.000 Intergenic Intergenic -50940 NM_002894 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr17-3701 chr17 17475451 17475661 + 9.07 0.000 Intergenic Intergenic -1444 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr7-6882 chr7 65398911 65399121 + 9.07 0.000 exon (NM_001287533, exon 5 of 5) exon (NM_001287533, exon 5 of 5) 25161 NM_001287533 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr13-2883 chr13 111941128 111941338 + 9.07 0.000 Intergenic Tigger6b|DNA|TcMar-Tigger -31077 NR_120392 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr10-2992 chr10 91088803 91089013 + 9.07 0.000 Intergenic Intergenic 43100 NR_047467 100874184 Hs.512240 NR_047467 LINC00502 - long intergenic non-protein coding RNA 502 ncRNA chr1-15837 chr1 180251049 180251259 + 9.07 0.000 intron (NM_033343, intron 2 of 5) intron (NM_033343, intron 2 of 5) 20890 NM_033343 89884 Hs.658487 NM_033343 ENSG00000121454 LHX4 CPHD4 LIM homeobox 4 protein-coding chr6-7716 chr6 89087956 89088166 + 9.07 0.000 Intergenic Intergenic 7310 NM_006813 10957 Hs.75969 NM_006813 ENSG00000146278 PNRC1 B4-2|PNAS-145|PROL2|PRR2 proline rich nuclear receptor coactivator 1 protein-coding chr9-5536 chr9 108343988 108344198 + 9.07 0.000 Intergenic Intergenic 511893 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr2-6900 chr2 98690327 98690537 + 9.07 0.000 intron (NM_012214, intron 2 of 15) L1MDa|LINE|L1 -26959 NM_001160154 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding chr17-3423 chr17 15917539 15917749 + 9.07 0.000 Intergenic CpG -27273 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr1-3051 chr1 9182425 9182635 + 9.07 0.000 promoter-TSS (NR_132742) promoter-TSS (NR_132742) -192 NR_132742 106614088 Hs.551837 NR_132742 ENSG00000228526 MIR34AHG - MIR34A host gene ncRNA chr8-4288 chr8 96409768 96409978 + 9.07 0.000 Intergenic Intergenic -22435 NR_125828 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr4-7469 chr4 70903522 70903732 + 9.07 0.000 intron (NM_173468, intron 1 of 5) intron (NM_173468, intron 1 of 5) 1258 NM_173468 92597 Hs.691454 NM_173468 ENSG00000173542 MOB1B MATS2|MOB4A|MOBKL1A MOB kinase activator 1B protein-coding chr22-3398 chr22 35495873 35496083 + 9.07 0.000 Intergenic AluSc8|SINE|Alu -44516 NM_001366725 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr6-3382 chr6 45423900 45424110 + 9.07 0.000 intron (NM_001015051, intron 3 of 7) intron (NM_001015051, intron 3 of 7) 1730 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr12-4052 chr12 50303124 50303334 + 9.07 0.000 Intergenic AluJo|SINE|Alu -19709 NM_001113546 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chrX-4732 chrX 91390388 91390598 + 9.07 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -44346 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr3-6593 chr3 125334845 125335055 + 9.07 0.000 intron (NM_001348436, intron 1 of 8) L2a|LINE|L2 22330 NM_001348433 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chrX-4132 chrX 27467001 27467211 + 9.07 0.000 Intergenic Intergenic -3765 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr18-1028 chr18 77055176 77055386 + 9.07 0.000 intron (NM_001025100, intron 3 of 3) intron (NM_001025100, intron 3 of 3) -38226 NM_001025090 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr1-11121 chr1 231862038 231862248 + 9.07 0.000 intron (NM_001164541, intron 9 of 9) MIRc|SINE|MIR -43626 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 ncRNA chr18-3042 chr18 28053580 28053790 + 9.07 0.000 intron (NM_001792, intron 2 of 15) MER57C1|LTR|ERV1 -17044 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr16-4467 chr16 56310939 56311149 + 9.07 0.000 intron (NM_138736, intron 3 of 7) MER91A|DNA|hAT-Tip100 65524 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr8-6768 chr8 92097854 92098064 + 9.07 0.000 intron (NM_175634, intron 1 of 11) intron (NM_175634, intron 1 of 11) 1729 NM_001198628 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr5-3591 chr5 94463880 94464090 + 9.07 0.000 intron (NM_001145678, intron 11 of 20) intron (NM_001145678, intron 11 of 20) 154619 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr1-8427 chr1 92374154 92374364 + 9.07 0.000 intron (NM_024813, intron 11 of 12) L2a|LINE|L2 75200 NM_024813 79871 Hs.444421 NM_024813 ENSG00000122484 RPAP2 C1orf82|Rtr1 RNA polymerase II associated protein 2 protein-coding chr1-10376 chr1 155911488 155911698 + 9.07 0.000 promoter-TSS (NM_001256821) promoter-TSS (NM_001256821) -244 NM_001256820 6016 Hs.491234 NM_006912 ENSG00000143622 RIT1 NS8|RIBB|RIT|ROC1 Ras like without CAAX 1 protein-coding chr7-1506 chr7 1196581 1196791 + 9.07 0.000 Intergenic Intergenic 35901 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr11-9830 chr11 72478697 72478907 + 9.07 0.000 Intergenic Intergenic -44118 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr12-2960 chr12 107416102 107416312 + 9.07 0.000 intron (NM_001347944, intron 1 of 14) intron (NM_001347944, intron 1 of 14) 95619 NM_001347944 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr3-3602 chr3 74918682 74918892 + 9.07 0.000 Intergenic L1PA11|LINE|L1 -295689 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr3-4337 chr3 178469071 178469281 + 9.07 0.000 Intergenic AluSc|SINE|Alu 49975 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr22-2832 chr22 43699625 43699835 + 8.96 0.000 intron (NM_198856, intron 8 of 29) L1ME1|LINE|L1 112575 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr2-11856 chr2 21439090 21439300 + 8.96 0.000 Intergenic Intergenic 271457 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr15-4969 chr15 79069943 79070153 + 8.96 0.000 intron (NM_001145648, intron 1 of 26) intron (NM_001145648, intron 1 of 26) 20732 NM_002891 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr19-6357 chr19 11472459 11472669 + 8.96 0.000 intron (NM_032281, intron 1 of 6) AluJo|SINE|Alu 8482 NM_001420 1995 Hs.1701 NM_001420 ENSG00000196361 ELAVL3 HUC|HUCL|PLE21 ELAV like RNA binding protein 3 protein-coding chr12-7755 chr12 94679538 94679748 + 8.96 0.000 Intergenic Intergenic -29086 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr20-3375 chr20 34194187 34194397 + 8.96 0.000 Intergenic Intergenic -66073 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr8-6668 chr8 80285702 80285912 + 8.96 0.000 Intergenic AluJo|SINE|Alu 44418 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA chr6-4969 chr6 106335418 106335628 + 8.96 0.000 Intergenic AluSz6|SINE|Alu -9703 NM_001286111 9474 Hs.486063 NM_004849 ENSG00000057663 ATG5 APG5|APG5-LIKE|APG5L|ASP|SCAR25|hAPG5 autophagy related 5 protein-coding chr2-8604 chr2 140531483 140531693 + 8.96 0.000 intron (NM_018557, intron 47 of 90) L2c|LINE|L2 55097 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr11-8344 chr11 77930262 77930472 + 8.96 0.000 intron (NM_033547, intron 10 of 22) intron (NM_033547, intron 10 of 22) 64301 NM_033547 92105 Hs.533723 NM_033547 ENSG00000149262 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding chr5-1742 chr5 176365299 176365509 + 8.96 0.000 promoter-TSS (NM_173664) promoter-TSS (NM_173664) -64 NM_001317948 285598 Hs.424552 NM_173664 ENSG00000175414 ARL10 ARL10A ADP ribosylation factor like GTPase 10 protein-coding chr5-5793 chr5 175161062 175161272 + 8.96 0.000 Intergenic L2b|LINE|L2 -165436 NR_046113 441116 Hs.533036 NM_001004348 ENSG00000204754 LINC01951 - long intergenic non-protein coding RNA 1951 ncRNA KZ208915.1-5 KZ208915.1 4814240 4814450 + 8.96 0.000 NA NA NA NA chr12-4989 chr12 78486750 78486960 + 8.96 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -127109 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr10-6884 chr10 33039197 33039407 + 8.96 0.000 Intergenic Intergenic 77505 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr1-6162 chr1 183877484 183877694 + 8.96 0.000 intron (NM_001297669, intron 5 of 18) intron (NM_001297669, intron 5 of 18) 72469 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr10-5910 chr10 119307158 119307368 + 8.96 0.000 intron (NM_005308, intron 1 of 15) MIR|SINE|MIR -70709 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr3-4784 chr3 119297204 119297414 + 8.96 0.000 intron (NM_020754, intron 1 of 11) intron (NM_020754, intron 1 of 11) 2926 NM_020754 57514 Hs.668218 NM_020754 ENSG00000031081 ARHGAP31 AOS1|CDGAP Rho GTPase activating protein 31 protein-coding chr1-9835 chr1 62447705 62447915 + 8.96 0.000 intron (NM_001017415, intron 7 of 8) AluY|SINE|Alu 10761 NM_003368 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr11-3234 chr11 70787185 70787395 + 8.96 0.000 intron (NM_012309, intron 13 of 24) intron (NM_012309, intron 13 of 24) -75500 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA chr20-2169 chr20 44796328 44796538 + 8.96 0.000 intron (NM_001205317, intron 1 of 5) GA-rich|Low_complexity|Low_complexity 14113 NM_182970 140730 Hs.517065 NM_182970 ENSG00000101098 RIMS4 C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma regulating synaptic membrane exocytosis 4 protein-coding chr11-7118 chr11 124093566 124093776 + 8.96 0.000 Intergenic Intergenic -21733 NM_198315 4013 Hs.152944 NM_014622 ENSG00000110002 VWA5A BCSC-1|BCSC1|LOH11CR2A von Willebrand factor A domain containing 5A protein-coding chr11-6797 chr11 90415642 90415852 + 8.96 0.000 intron (NR_104190, intron 1 of 6) L2b|LINE|L2 140110 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA chr22-2639 chr22 33734724 33734934 + 8.96 0.000 intron (NR_038949, intron 5 of 9) intron (NR_038949, intron 5 of 9) 9843 NR_038949 100506195 Hs.658872 NR_038949 ENSG00000224973 LARGE-AS1 - LARGE antisense RNA 1 ncRNA chr13-2070 chr13 59475852 59476062 + 8.96 0.000 Intergenic Intergenic -536761 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr17-5938 chr17 75642095 75642305 + 8.96 0.000 TTS (NR_028439) TTS (NR_028439) -4051 NM_001162997 100130933 Hs.662541 NM_001162997 ENSG00000259120 SMIM6 C17orf110|ELN small integral membrane protein 6 protein-coding chr14-3285 chr14 83467891 83468101 + 8.96 0.000 Intergenic Intergenic 825364 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr11-3406 chr11 3215457 3215667 + 8.96 0.000 Intergenic MIRc|SINE|MIR -2770 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr6-4130 chr6 161366299 161366509 + 8.96 0.000 intron (NM_004562, intron 10 of 11) intron (NM_004562, intron 10 of 11) -92343 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr3-5858 chr3 33883937 33884147 + 8.96 0.000 Intergenic Intergenic 85412 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr20-2611 chr20 40332070 40332280 + 8.96 0.000 Intergenic L2|LINE|L2 327714 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr10-3887 chr10 58734943 58735153 + 8.96 0.000 intron (NM_001080512, intron 3 of 20) intron (NM_001080512, intron 3 of 20) 20033 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr6-6013 chr6 108579048 108579258 + 8.96 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 18236 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr20-1911 chr20 353466 353676 + 8.96 0.000 exon (NM_001323679, exon 6 of 6) exon (NM_001323679, exon 6 of 6) 5666 NM_001323685 80023 Hs.416024 NM_024958 ENSG00000125841 NRSN2 C20orf98|dJ1103G7.6 neurensin 2 protein-coding chr4-7682 chr4 87537224 87537434 + 8.96 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -7826 NM_001128310 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr19-4380 chr19 2718183 2718393 + 8.96 0.000 intron (NM_145173, intron 1 of 1) MIR3|SINE|MIR 3084 NM_145173 148252 Hs.172753 NM_145173 ENSG00000176490 DIRAS1 Di-Ras1|GBTS1|RIG DIRAS family GTPase 1 protein-coding chr1-14720 chr1 65082651 65082861 + 8.96 0.000 Intergenic MamRep434|DNA|TcMar-Tigger -15010 NM_001321853 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr7-8690 chr7 74006523 74006733 + 8.96 0.000 Intergenic Intergenic -21161 NM_001278918 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr7-1619 chr7 6261086 6261296 + 8.96 0.000 intron (NM_001367581, intron 1 of 13) L1MEg|LINE|L1 11433 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr2-5086 chr2 11170516 11170726 + 8.96 0.000 intron (NM_001282711, intron 4 of 5) AluSx3|SINE|Alu 15154 NR_104231 130814 Hs.274415 NM_152391 ENSG00000162976 SLC66A3 C2orf22|PQLC3 solute carrier family 66 member 3 protein-coding chr4-7037 chr4 26964188 26964398 + 8.96 0.000 intron (NM_001169118, intron 3 of 12) MER117|DNA|hAT-Charlie 103452 NM_001169118 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chrX-3400 chrX 6230764 6230974 + 8.96 0.000 TTS (NR_136577) TTS (NR_136577) -2002 NM_001282145 57502 Hs.21107 NM_020742 ENSG00000146938 NLGN4X ASPGX2|AUTSX2|HLNX|HNL4X|NLGN4 neuroligin 4 X-linked protein-coding chr11-6918 chr11 108386247 108386457 + 8.96 0.000 intron (NM_001330368, intron 5 of 6) intron (NM_001330368, intron 5 of 6) 81177 NM_001351110 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr11-8387 chr11 92811588 92811798 + 8.96 0.000 intron (NM_001008781, intron 12 of 24) intron (NM_001008781, intron 12 of 24) 103935 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr2-6329 chr2 73728590 73728800 + 8.96 0.000 Intergenic Intergenic 8566 NM_001330388 51002 Hs.157401 NM_016058 ENSG00000144034 TPRKB CGI-121|CGI121|GAMOS5 TP53RK binding protein protein-coding chr11-2675 chr11 66487368 66487578 + 8.96 0.000 intron (NM_130443, intron 5 of 17) intron (NM_130443, intron 5 of 17) 7039 NM_001256670 10072 Hs.502914 NM_005700 ENSG00000254986 DPP3 DPPIII dipeptidyl peptidase 3 protein-coding chr4-4616 chr4 78798376 78798586 + 8.96 0.000 intron (NM_017593, intron 1 of 13) intron (NM_017593, intron 1 of 13) 22103 NM_198892 55589 Hs.146551 NM_017593 ENSG00000138756 BMP2K BIKE|HRIHFB2017 BMP2 inducible kinase protein-coding chr19-6966 chr19 47877044 47877254 + 8.96 0.000 intron (NM_003167, intron 4 of 5) intron (NM_003167, intron 4 of 5) 9166 NM_003167 6822 Hs.515835 NM_003167 ENSG00000105398 SULT2A1 DHEA-ST|DHEAS|HST|ST2|ST2A1|ST2A3|STD|hSTa sulfotransferase family 2A member 1 protein-coding chr5-7972 chr5 82741020 82741230 + 8.96 0.000 Intergenic HERV16-int|LTR|ERVL -99030 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr11-10625 chr11 125295823 125296033 + 8.96 0.000 intron (NM_022062, intron 2 of 12) intron (NM_022062, intron 2 of 12) 131177 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr6-3583 chr6 72652654 72652864 + 8.96 0.000 intron (NR_120503, intron 2 of 3) MIRb|SINE|MIR 22264 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr2-5821 chr2 232488349 232488559 + 8.96 0.000 promoter-TSS (NM_001290787) promoter-TSS (NM_001290787) -620 NM_001290787 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr10-4334 chr10 28047263 28047473 + 8.96 0.000 Intergenic Intergenic 26010 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr4-4978 chr4 133152542 133152752 + 8.96 0.000 exon (NM_020815, exon 1 of 1) exon (NM_020815, exon 1 of 1) 3353 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding GL000194.1-3 GL000194.1 58091 58301 + 8.96 0.000 NA NA NA NA chr1-7923 chr1 162548281 162548491 + 8.96 0.000 Intergenic Intergenic -13054 NM_001324117 6675 Hs.492859 NM_003115 ENSG00000117143 UAP1 AGX|AGX1|AGX2|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding chr11-10071 chr11 84940552 84940762 + 8.96 0.000 intron (NM_001351274, intron 5 of 26) L1MA3|LINE|L1 -17236 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr21-1084 chr21 32866197 32866407 + 8.96 0.000 Intergenic Intergenic -52599 NM_019596 56245 Hs.517235 NM_019596 ENSG00000205929 C21orf62 B37|C21orf120|PRED81 chromosome 21 open reading frame 62 protein-coding chrX-2654 chrX 114065856 114066066 + 8.96 0.000 Intergenic Intergenic -127743 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr4-8521 chr4 162854014 162854224 + 8.96 0.000 Intergenic LTR67B|LTR|ERVL 239509 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr4-4476 chr4 56132247 56132457 + 8.96 0.000 Intergenic AluJb|SINE|Alu -37843 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr7-3291 chr7 31050019 31050229 + 8.96 0.000 Intergenic MIR3|SINE|MIR -2184 NM_001199636 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr21-1607 chr21 17070893 17071103 + 8.96 0.000 Intergenic THE1C|LTR|ERVL-MaLR -367892 NR_037585 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chr14-2567 chr14 36348304 36348514 + 8.96 0.000 Intergenic AluSx3|SINE|Alu -27733 NM_001144891 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr9-5178 chr9 69919667 69919877 + 8.96 0.000 Intergenic Intergenic 98955 NM_001308086 138255 Hs.444459 NM_001010940 ENSG00000204711 C9orf135 - chromosome 9 open reading frame 135 protein-coding chr21-511 chr21 34313077 34313287 + 8.96 0.000 Intergenic Intergenic -50842 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr6-5876 chr6 40835457 40835667 + 8.96 0.000 Intergenic Intergenic 187718 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr16-5534 chr16 26435221 26435431 + 8.96 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 410089 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr2-7572 chr2 25036964 25037174 + 8.96 0.000 non-coding (NR_034113, exon 3 of 3) non-coding (NR_034113, exon 3 of 3) -5007 NM_014971 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr17-5224 chr17 17129389 17129599 + 8.96 0.000 intron (NM_201274, intron 4 of 23) intron (NM_201274, intron 4 of 23) 76839 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr17-8243 chr17 65671300 65671510 + 8.96 0.000 intron (NM_001353129, intron 24 of 26) intron (NM_001353129, intron 24 of 26) -109757 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr6-2649 chr6 169503597 169503807 + 8.96 0.000 intron (NR_146875, intron 19 of 20) intron (NR_146875, intron 19 of 20) 198327 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr20-3920 chr20 32610954 32611164 + 8.96 0.000 Intergenic Intergenic 23580 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr3-5316 chr3 127495432 127495642 + 8.96 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 42243 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr17-4343 chr17 4565659 4565869 + 8.96 0.000 Intergenic Intergenic -5187 NM_001288702 124975 Hs.130749 NM_153338 ENSG00000167741 GGT6 - gamma-glutamyltransferase 6 protein-coding chr18-1486 chr18 63788504 63788714 + 8.96 0.000 intron (NM_001261831, intron 2 of 6) Tigger3b|DNA|TcMar-Tigger 10832 NM_001261830 8710 Hs.138202 NM_003784 ENSG00000166396 SERPINB7 MEGSIN|PPKN|TP55 serpin family B member 7 protein-coding chr5-3476 chr5 171168160 171168370 + 8.96 0.000 intron (NM_022897, intron 14 of 27) L2c|LINE|L2 -140983 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr3-8552 chr3 148815759 148815969 + 8.96 0.000 Intergenic Intergenic -11947 NM_001871 1360 Hs.477891 NM_001871 ENSG00000153002 CPB1 CPB|PASP|PCPB carboxypeptidase B1 protein-coding chr4-3644 chr4 19961279 19961489 + 8.96 0.000 Intergenic Intergenic -290521 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr2-4854 chr2 96157761 96157971 + 8.96 0.000 Intergenic Intergenic -12426 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr3-3302 chr3 154723396 154723606 + 8.96 0.000 Intergenic Intergenic -293311 NM_001038705 344758 Hs.376338 NM_001038705 ENSG00000174948 GPR149 IEDA|PGR10|R35 G protein-coupled receptor 149 protein-coding chr14-2173 chr14 94912679 94912889 + 8.96 0.000 Intergenic MLT2B2|LTR|ERVL 142142 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr16-3069 chr16 58654543 58654753 + 8.96 0.000 Intergenic Intergenic -24822 NM_016284 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr6-4247 chr6 7016583 7016793 + 8.96 0.000 Intergenic L2c|LINE|L2 -91055 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr13-2907 chr13 113445271 113445481 + 8.96 0.000 intron (NM_138430, intron 1 of 6) intron (NM_138430, intron 1 of 6) 3782 NM_199162 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding chr15-4189 chr15 101408494 101408704 + 8.96 0.000 intron (NM_138325, intron 6 of 13) intron (NM_138325, intron 6 of 13) 74162 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr12-6417 chr12 79369613 79369823 + 8.96 0.000 intron (NM_001291901, intron 8 of 9) intron (NM_001291901, intron 8 of 9) -49539 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr8-7083 chr8 117771359 117771569 + 8.96 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 149449 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr9-5126 chr9 36173810 36174020 + 8.96 0.000 Intergenic L1MA3|LINE|L1 4527 NM_005893 881 Hs.115460 NM_005893 ENSG00000185972 CCIN BTBD20|KBTBD14 calicin protein-coding chr18-2130 chr18 54852919 54853129 + 8.96 0.000 intron (NM_004163, intron 1 of 5) intron (NM_004163, intron 1 of 5) 24547 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr4-5317 chr4 181261436 181261646 + 8.96 0.000 non-coding (NR_149139, exon 2 of 2) non-coding (NR_149139, exon 2 of 2) 3488 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr19-2562 chr19 55467740 55467950 + 8.96 0.000 Intergenic Intergenic -6203 NM_001136202 79763 Hs.467306 NM_024710 ENSG00000063241 ISOC2 - isochorismatase domain containing 2 protein-coding chr9-8224 chr9 109603009 109603219 + 8.96 0.000 Intergenic LTR78|LTR|ERV1 -37674 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr13-4483 chr13 113474313 113474523 + 8.96 0.000 intron (NM_001014283, intron 3 of 6) intron (NM_001014283, intron 3 of 6) 16293 NM_001014283 55208 Hs.682987 NM_018185 ENSG00000150401 DCUN1D2 C13orf17 defective in cullin neddylation 1 domain containing 2 protein-coding chr6-5689 chr6 112503111 112503321 + 8.96 0.000 Intergenic Intergenic 155886 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr2-13039 chr2 108989019 108989229 + 8.96 0.000 promoter-TSS (NM_022336) promoter-TSS (NM_022336) 96 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr4-4421 chr4 48140916 48141126 + 8.96 0.000 intron (NM_003215, intron 15 of 17) intron (NM_003215, intron 15 of 17) -6771 NM_003328 7294 Hs.479669 NM_003328 ENSG00000074966 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding chr5-8055 chr5 92552212 92552422 + 8.96 0.000 Intergenic Intergenic 1019026 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr5-8421 chr5 127650795 127651005 + 8.96 0.000 intron (NM_001048252, intron 1 of 2) intron (NM_001048252, intron 1 of 2) 1879 NM_001048252 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding chr2-14649 chr2 235538565 235538775 + 8.96 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -20749 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr1-11601 chr1 217749204 217749414 + 8.96 0.000 intron (NM_138796, intron 6 of 10) intron (NM_138796, intron 6 of 10) 35811 NR_125784 103752555 Hs.602803 NR_125784 ENSG00000234070 SPATA17-AS1 - SPATA17 antisense RNA 1 ncRNA chr1-14560 chr1 52897643 52897853 + 8.96 0.000 intron (NM_001198962, intron 6 of 7) intron (NM_001198962, intron 6 of 7) 23992 NM_018281 55268 Hs.476319 NM_018281 ENSG00000121310 ECHDC2 - enoyl-CoA hydratase domain containing 2 protein-coding chr1-15138 chr1 103352058 103352268 + 8.96 0.000 Intergenic MLT2A1|LTR|ERVL 173348 NM_001286997 101928436 Hs.558999 NM_001286997 LOC101928436 - uncharacterized LOC101928436 protein-coding chr16-1596 chr16 17885327 17885537 + 8.96 0.000 Intergenic L1MC5a|LINE|L1 -414472 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr2-13929 chr2 183516091 183516301 + 8.96 0.000 Intergenic MIRb|SINE|MIR 391753 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr6-6483 chr6 113315325 113315535 + 8.96 0.000 Intergenic MIR3|SINE|MIR 118017 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr5-6784 chr5 90383594 90383804 + 8.96 0.000 Intergenic HAL1|LINE|L1 26087 NM_001297768 1070 Hs.591767 NM_004365 ENSG00000153140 CETN3 CDC31|CEN3 centrin 3 protein-coding chr12-1823 chr12 10771207 10771417 + 8.96 0.000 intron (NR_120463, intron 2 of 6) intron (NR_120463, intron 2 of 6) 21078 NR_120463 101928162 Hs.112950 NR_120463 ENSG00000256888 LINC02366 - long intergenic non-protein coding RNA 2366 ncRNA GL000225.1-52 GL000225.1 118283 118493 + 8.96 0.000 NA NA NA NA chr9-4662 chr9 120062608 120062818 + 8.96 0.000 Intergenic Intergenic 127653 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr2-12846 chr2 96388072 96388282 + 8.96 0.000 Intergenic L1M4a1|LINE|L1 52411 NM_015341 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr10-5880 chr10 116523701 116523911 + 8.96 0.000 Intergenic Intergenic -22125 NM_000936 5406 Hs.501135 NM_000936 ENSG00000175535 PNLIP PL|PNLIPD|PTL pancreatic lipase protein-coding chr2-13472 chr2 146757351 146757561 + 8.96 0.000 Intergenic MIRb|SINE|MIR 170399 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr22-2690 chr22 37259676 37259886 + 8.96 0.000 Intergenic CpG -15512 NM_002872 5880 Hs.517601 NM_002872 ENSG00000128340 RAC2 EN-7|Gx|HSPC022|p21-Rac2 Rac family small GTPase 2 protein-coding chr3-4384 chr3 192932459 192932669 + 8.96 0.000 Intergenic FLAM_C|SINE|Alu -14708 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr3-5966 chr3 46833906 46834116 + 8.96 0.000 promoter-TSS (NR_148409) promoter-TSS (NR_148409) 84 NR_160554 339906 Hs.585127 NM_182702 ENSG00000178055 PRSS42P PRSS42|TESSP2 serine protease 42, pseudogene pseudo chr11-2130 chr11 9748488 9748698 + 8.96 0.000 intron (NM_015055, intron 10 of 11) intron (NM_015055, intron 10 of 11) -9700 NR_036485 283104 Hs.632156 NR_036485 ENSG00000246273 SBF2-AS1 - SBF2 antisense RNA 1 ncRNA chr16-5009 chr16 29147923 29148133 + 8.96 0.000 Intergenic Intergenic 73186 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr2-12025 chr2 28939442 28939652 + 8.96 0.000 intron (NM_015131, intron 14 of 17) (TTCC)n|Simple_repeat|Simple_repeat 11564 NR_145755 109617012 NR_145755 ENSG00000265706 SNORD53B - small nucleolar RNA, C/D box 53B snoRNA chr11-9456 chr11 61594105 61594315 + 8.96 0.000 intron (NR_110189, intron 1 of 3) AluJr|SINE|Alu 5716 NR_110189 101927495 Hs.553866 NR_110189 ENSG00000250230 LOC101927495 - uncharacterized LOC101927495 ncRNA chr1-6690 chr1 53468034 53468244 + 8.96 0.000 TTS (NM_033067) TTS (NM_033067) 8740 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr6-7963 chr6 112356169 112356379 + 8.96 0.000 Intergenic Intergenic 8944 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr10-5037 chr10 35192973 35193183 + 8.96 0.000 intron (NM_182771, intron 4 of 5) L2b|LINE|L2 -2049 NM_001267568 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr1-6247 chr1 228171525 228171735 + 8.96 0.000 intron (NM_001010867, intron 1 of 2) intron (NM_001010867, intron 1 of 2) -2940 NM_001310327 200205 Hs.237017 NM_001010867 ENSG00000181873 IBA57 C1orf69|MMDS3|SPG74 iron-sulfur cluster assembly factor IBA57 protein-coding chr3-2896 chr3 49125895 49126105 + 8.96 0.000 exon (NM_002292, exon 17 of 32) exon (NM_002292, exon 17 of 32) -5062 NM_001351107 10869 Hs.255596 NM_006677 ENSG00000172046 USP19 ZMYND9 ubiquitin specific peptidase 19 protein-coding chr5-8940 chr5 159033480 159033690 + 8.96 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 64371 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr10-2417 chr10 259001 259211 + 8.96 0.000 Intergenic Intergenic 79112 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr1-14092 chr1 30516418 30516628 + 8.96 0.000 Intergenic Intergenic -202249 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr7-6917 chr7 77200221 77200431 + 8.96 0.000 promoter-TSS (NM_006682) promoter-TSS (NM_006682) -507 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding chr6-5278 chr6 139125472 139125682 + 8.96 0.000 Intergenic Intergenic -9503 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding chr14-1336 chr14 76611791 76612001 + 8.96 0.000 Intergenic Intergenic -149572 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr1-15233 chr1 111991909 111992119 + 8.96 0.000 intron (NR_145438, intron 1 of 1) intron (NR_145438, intron 1 of 1) 1478 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr10-8965 chr10 118875024 118875234 + 8.96 0.000 Intergenic Intergenic -120159 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr5-1971 chr5 126147086 126147296 + 8.96 0.000 Intergenic Intergenic -32386 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr6-7600 chr6 76292991 76293201 + 8.96 0.000 Intergenic L1PA7|LINE|L1 -220418 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr20-3599 chr20 4873697 4873907 + 8.96 0.000 intron (NM_005116, intron 11 of 16) intron (NM_005116, intron 11 of 16) -50194 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr7-9402 chr7 131491491 131491701 + 8.96 0.000 3' UTR (NM_013255, exon 18 of 18) 3' UTR (NM_013255, exon 18 of 18) 65032 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr1-15126 chr1 102546815 102547025 + 8.96 0.000 Intergenic MSTD|LTR|ERVL-MaLR -549686 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr7-7660 chr7 150664681 150664891 + 8.96 0.000 Intergenic Intergenic -20920 NM_015660 26157 Hs.647071 NM_015660 ENSG00000106560 GIMAP2 HIMAP2|IAN12|IMAP2 GTPase, IMAP family member 2 protein-coding chr11-7042 chr11 119636180 119636390 + 8.96 0.000 Intergenic Intergenic 92915 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr10-9059 chr10 124763399 124763609 + 8.96 0.000 intron (NM_001304467, intron 5 of 6) intron (NM_001304467, intron 5 of 6) -19126 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr17-5190 chr17 13163986 13164196 + 8.96 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 142669 NR_146885 105371541 NR_146885 ENSG00000234634 LINC02093 - long intergenic non-protein coding RNA 2093 ncRNA chr11-2473 chr11 62851447 62851657 + 8.96 0.000 TTS (NR_152575) TTS (NR_152575) 1483 NR_000008 9304 Hs.744737 NR_000008 ENSG00000277194 SNORD22 RNU22|U22 small nucleolar RNA, C/D box 22 snoRNA chr9-5381 chr9 92065030 92065240 + 8.96 0.000 intron (NM_001368273, intron 7 of 15) L1MD1|LINE|L1 50278 NM_178324 10558 Hs.90458 NM_006415 ENSG00000090054 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase long chain base subunit 1 protein-coding chr12-7909 chr12 108274965 108275175 + 8.96 0.000 Intergenic Intergenic 45592 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr2-13421 chr2 142139275 142139485 + 8.96 0.000 Intergenic Intergenic -7679 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr1-6729 chr1 64112347 64112557 + 8.96 0.000 promoter-TSS (NR_110666) promoter-TSS (NR_110666) -247 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr1-9213 chr1 22396540 22396750 + 8.96 0.000 Intergenic L2a|LINE|L2 -55206 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr19-2203 chr19 34135833 34136043 + 8.96 0.000 Intergenic L1ME1|LINE|L1 -36566 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr3-4642 chr3 29597355 29597565 + 8.96 0.000 intron (NM_001003792, intron 4 of 13) intron (NM_001003792, intron 4 of 13) 316148 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr3-10106 chr3 111846792 111847002 + 8.96 0.000 TTS (NM_153268) TTS (NM_153268) -12283 NM_145753 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr4-5768 chr4 70557493 70557703 + 8.96 0.000 Intergenic Intergenic -34658 NM_016519 258 Hs.272396 NM_016519 ENSG00000178522 AMBN AI1F ameloblastin protein-coding chr7-3943 chr7 129864133 129864343 + 8.96 0.000 intron (NM_001202498, intron 3 of 6) intron (NM_001202498, intron 3 of 6) 88722 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr2-5358 chr2 96130313 96130523 + 8.96 0.000 intron (NM_001002036, intron 6 of 8) intron (NM_001002036, intron 6 of 8) 8018 NM_001002036 431705 Hs.447993 NM_001002036 ENSG00000188886 ASTL SAS1B astacin like metalloendopeptidase protein-coding chr4-5264 chr4 172826552 172826762 + 8.96 0.000 intron (NM_001034845, intron 7 of 12) intron (NM_001034845, intron 7 of 12) -99779 NR_125894 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr10-5414 chr10 76920370 76920580 + 8.96 0.000 intron (NM_001271519, intron 23 of 28) MIR|SINE|MIR 32431 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chrX-860 chrX 140843900 140844110 + 8.96 0.000 Intergenic MER5A|DNA|hAT-Charlie -59447 NM_004065 1038 Hs.446675 NM_004065 ENSG00000184258 CDR1 CDR|CDR34|CDR62A cerebellar degeneration related protein 1 protein-coding chr7-4706 chr7 45851482 45851692 + 8.96 0.000 Intergenic AluY|SINE|Alu -36901 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding chr19-2491 chr19 5564034 5564244 + 8.96 0.000 intron (NR_027064, intron 1 of 2) intron (NR_027064, intron 1 of 2) 3895 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr2-14177 chr2 205627483 205627693 + 8.96 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -54912 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr13-2137 chr13 99951482 99951692 + 8.96 0.000 intron (NR_120421, intron 1 of 4) L1MB3|LINE|L1 5578 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr17-5478 chr17 40671881 40672091 + 8.96 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -6809 NM_152349 125113 Hs.6920 NM_152349 ENSG00000213424 KRT222 KA21|KRT222P keratin 222 protein-coding chr3-5776 chr3 24200041 24200251 + 8.96 0.000 intron (NM_001354714, intron 2 of 8) intron (NM_001354714, intron 2 of 8) 48822 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr19-4694 chr19 18373543 18373753 + 8.96 0.000 Intergenic Intergenic -12510 NM_004864 9518 Hs.616962 NM_004864 ENSG00000130513 GDF15 GDF-15|MIC-1|MIC1|NAG-1|PDF|PLAB|PTGFB growth differentiation factor 15 protein-coding chr17-5219 chr17 16988915 16989125 + 8.96 0.000 non-coding (NR_146886, exon 2 of 3) non-coding (NR_146886, exon 2 of 3) 691 NR_146886 105371562 Hs.579259 NR_146886 ENSG00000230969 LINC02090 - long intergenic non-protein coding RNA 2090 ncRNA chr8-4695 chr8 140113161 140113371 + 8.96 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -12731 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr6-7403 chr6 51744272 51744482 + 8.96 0.000 intron (NM_170724, intron 60 of 60) intron (NM_170724, intron 60 of 60) 122507 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr8-4140 chr8 75028082 75028292 + 8.96 0.000 intron (NM_031461, intron 13 of 14) intron (NM_031461, intron 13 of 14) 28032 NM_001286778 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr11-3578 chr11 61078125 61078335 + 8.96 0.000 Intergenic Intergenic -15733 NM_001346456 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr3-6399 chr3 98592507 98592717 + 8.96 0.000 intron (NM_000097, intron 1 of 6) intron (NM_000097, intron 1 of 6) 999 NM_000097 1371 Hs.476982 NM_000097 ENSG00000080819 CPOX COX|CPO|CPX|HCP coproporphyrinogen oxidase protein-coding chr17-5381 chr17 31758687 31758897 + 8.96 0.000 Intergenic Intergenic 100170 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr10-5151 chr10 52962762 52962972 + 8.96 0.000 Intergenic Intergenic -191167 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr1-10029 chr1 88228270 88228480 + 8.96 0.000 Intergenic Intergenic -455769 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr22-2054 chr22 44862794 44863004 + 8.96 0.000 TTS (NM_001198726) TTS (NM_001198726) 110341 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr12-4177 chr12 91180695 91180905 + 8.96 0.000 intron (NM_001920, intron 1 of 7) intron (NM_001920, intron 1 of 7) -1182 NM_133503 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr16-3141 chr16 74510201 74510411 + 8.96 0.000 intron (NM_001145666, intron 1 of 25) AluSp|SINE|Alu -88836 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr10-4453 chr10 72831874 72832084 + 8.96 0.000 intron (NR_073062, intron 3 of 9) L2a|LINE|L2 -61760 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr18-1711 chr18 2590100 2590310 + 8.96 0.000 intron (NM_006101, intron 10 of 16) intron (NM_006101, intron 10 of 16) 18648 NM_006101 10403 Hs.414407 NM_006101 ENSG00000080986 NDC80 HEC|HEC1|HsHec1|KNTC2|TID3|hsNDC80 NDC80 kinetochore complex component protein-coding chr6-5319 chr6 143716613 143716823 + 8.96 0.000 intron (NM_001100165, intron 2 of 11) intron (NM_001100165, intron 2 of 11) 38753 NM_001100164 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr1-9781 chr1 56569636 56569846 + 8.96 0.000 intron (NM_003713, intron 1 of 5) L2c|LINE|L2 9822 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chrX-2480 chrX 87188349 87188559 + 8.96 0.000 Intergenic L1ME3A|LINE|L1 -329348 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr1-11002 chr1 218717885 218718095 + 8.96 0.000 intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 200521 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chr6-2694 chr6 33691128 33691338 + 8.96 0.000 intron (NM_002224, intron 52 of 57) intron (NM_002224, intron 52 of 57) -6895 NR_037498 100500873 NR_037498 ENSG00000266509 MIR3934 - microRNA 3934 ncRNA chr11-5779 chr11 4788061 4788271 + 8.96 0.000 Intergenic Intergenic 16214 NM_001005177 119695 Hs.553563 NM_001005177 ENSG00000279270 OR52R1 OR11-22 olfactory receptor family 52 subfamily R member 1 (gene/pseudogene) protein-coding chr19-3163 chr19 38556836 38557046 + 8.96 0.000 intron (NM_001042723, intron 88 of 104) L1MC5|LINE|L1 -39406 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr6-4378 chr6 21992258 21992468 + 8.96 0.000 intron (NR_015410, intron 6 of 11) intron (NR_015410, intron 6 of 11) 154830 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr2-5432 chr2 119566232 119566442 + 8.96 0.000 intron (NR_073132, intron 6 of 24) Zaphod3|DNA|hAT-Tip100 21888 NM_001271049 200373 Hs.496753 NM_001029996 ENSG00000163075 CFAP221 FAP221|PCDP1 cilia and flagella associated protein 221 protein-coding chr4-3942 chr4 168634951 168635161 + 8.96 0.000 intron (NM_001166109, intron 1 of 18) intron (NM_001166109, intron 1 of 18) 3478 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr17-7746 chr17 34370763 34370973 + 8.96 0.000 Intergenic Intergenic -7635 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr3-7744 chr3 57423479 57423689 + 8.96 0.000 intron (NM_001366028, intron 35 of 73) intron (NM_001366028, intron 35 of 73) 120760 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr5-4887 chr5 66909524 66909734 + 8.96 0.000 intron (NM_001164664, intron 4 of 28) MIR3|SINE|MIR -49444 NM_001290226 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr10-5326 chr10 71195091 71195301 + 8.96 0.000 Intergenic Intergenic -17374 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr18-2949 chr18 21416153 21416363 + 8.96 0.000 intron (NM_001142966, intron 7 of 32) L1MEc|LINE|L1 174016 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr11-5768 chr11 3859571 3859781 + 8.96 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 3614 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr16-4452 chr16 55118130 55118340 + 8.96 0.000 Intergenic MER104|DNA|TcMar-Tc2 187036 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr14-2210 chr14 102545749 102545959 + 8.96 0.000 intron (NR_146561, intron 1 of 2) intron (NR_146561, intron 1 of 2) 600 NR_146561 105370681 NR_146561 ENSG00000259230 LINC02323 - long intergenic non-protein coding RNA 2323 ncRNA chr6-6164 chr6 4028523 4028733 + 8.96 0.000 intron (NR_146785, intron 1 of 20) intron (NR_146785, intron 1 of 20) 7328 NM_003913 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr1-10319 chr1 151846467 151846677 + 8.96 0.000 TTS (NM_182578) TTS (NM_182578) -6015 NM_001136003 100191040 Hs.694717 NM_001136003 ENSG00000225556 C2CD4D FAM148D C2 calcium dependent domain containing 4D protein-coding chr20-2837 chr20 60493525 60493735 + 8.96 0.000 Intergenic Intergenic 15519 NR_039758 100616362 NR_039758 ENSG00000266140 MIR4533 - microRNA 4533 ncRNA chr11-2554 chr11 94305314 94305524 + 8.96 0.000 promoter-TSS (NM_001199206) promoter-TSS (NM_001199206) -218 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr21-1660 chr21 26140104 26140314 + 8.96 0.000 5' UTR (NM_001136016, exon 1 of 17) 5' UTR (NM_001136016, exon 1 of 17) 181 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr4-7097 chr4 33212956 33213166 + 8.96 0.000 Intergenic MER41E|LTR|ERV1 826832 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr2-5167 chr2 29262429 29262639 + 8.96 0.000 intron (NM_004304, intron 11 of 28) intron (NM_004304, intron 11 of 28) -38634 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr7-2511 chr7 43467455 43467665 + 8.96 0.000 intron (NM_001287059, intron 13 of 27) intron (NM_001287059, intron 13 of 27) 54982 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr1-11873 chr1 40812157 40812367 + 8.96 0.000 intron (NM_004700, intron 1 of 13) AluJb|SINE|Alu 28475 NM_172163 9132 Hs.473058 NM_004700 ENSG00000117013 KCNQ4 DFNA2|DFNA2A|KV7.4 potassium voltage-gated channel subfamily Q member 4 protein-coding chrX-2250 chrX 47058761 47058971 + 8.96 0.000 exon (NM_014735, exon 11 of 11) exon (NM_014735, exon 11 of 11) -19489 NM_004683 9104 Hs.77854 NM_004683 ENSG00000130988 RGN GNL|HEL-S-41|RC|SMP30 regucalcin protein-coding chr6-3184 chr6 127458996 127459206 + 8.96 0.000 intron (NM_001012279, intron 7 of 11) intron (NM_001012279, intron 7 of 11) 288 NM_014702 9729 Hs.319247 NM_014702 ENSG00000189367 KIAA0408 - KIAA0408 protein-coding chr10-5662 chr10 98000303 98000513 + 8.96 0.000 intron (NM_001206528, intron 2 of 14) MER52A|LTR|ERV1 30213 NM_018058 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr1-10766 chr1 200936217 200936427 + 8.96 0.000 intron (NR_147176, intron 3 of 15) AluSc|SINE|Alu 7378 NR_147176 647215 Hs.576504 NR_147176 ENSG00000233217 MROH3P C1orf81 maestro heat like repeat family member 3, pseudogene pseudo chr9-8148 chr9 102866616 102866826 + 8.96 0.000 Intergenic THE1D|LTR|ERVL-MaLR -128612 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr2-7649 chr2 28319868 28320078 + 8.96 0.000 intron (NR_137438, intron 12 of 12) intron (NR_137438, intron 12 of 12) -9514 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr3-9192 chr3 35977306 35977516 + 8.96 0.000 Intergenic Intergenic 232935 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr8-1348 chr8 97090199 97090409 + 8.96 0.000 intron (NM_016134, intron 7 of 7) intron (NM_016134, intron 7 of 7) 187624 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr2-9333 chr2 225534795 225535005 + 8.96 0.000 intron (NM_001371273, intron 4 of 7) LTR41|LTR|ERVL 134014 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr17-4458 chr17 56011894 56012104 + 8.96 0.000 Intergenic Intergenic -141476 NM_001370326 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr4-4508 chr4 61662183 61662393 + 8.96 0.000 intron (NM_001371343, intron 5 of 23) MER52A|LTR|ERV1 460116 NM_001371342 chr17-3916 chr17 56883680 56883890 + 8.96 0.000 TTS (NR_027025) TTS (NR_027025) 1128 NR_027025 246754 Hs.720736 NR_027025 MTVR2 - mouse mammary tumor virus receptor homolog 2 pseudo chr7-2170 chr7 67403453 67403663 + 8.96 0.000 Intergenic MSTD|LTR|ERVL-MaLR 67582 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr2-9546 chr2 239567205 239567415 + 8.96 0.000 Intergenic L2|LINE|L2 165562 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr13-3059 chr13 35713955 35714165 + 8.96 0.000 Intergenic Intergenic 16333 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr1-15790 chr1 175913866 175914076 + 8.96 0.000 Intergenic MER34-int|LTR|ERV1 36628 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr4-6849 chr4 9389142 9389352 + 8.96 0.000 Intergenic Intergenic 21373 NR_027279 391622 Hs.722658 NR_027279 ENSG00000205946 USP17L6P DUB4|USP17L6|vDUB4 ubiquitin specific peptidase 17 like family member 6, pseudogene pseudo chrX-4851 chrX 104270486 104270696 + 8.96 0.000 Intergenic Intergenic -15658 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr7-5346 chr7 29351883 29352093 + 8.96 0.000 intron (NM_001293070, intron 2 of 13) intron (NM_001293070, intron 2 of 13) -127724 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr13-1365 chr13 80489846 80490056 + 8.96 0.000 Intergenic LTR12C|LTR|ERV1 -148825 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr2-6549 chr2 216943225 216943435 + 8.96 0.000 Intergenic Intergenic 72558 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr3-6999 chr3 170298554 170298764 + 8.96 0.000 intron (NM_002740, intron 16 of 17) AluSx|SINE|Alu -59056 NM_001145098 6498 Hs.536655 NM_005414 ENSG00000136603 SKIL SNO|SnoA|SnoI|SnoN SKI like proto-oncogene protein-coding chr6-5774 chr6 170097843 170098053 + 8.96 0.000 Intergenic Intergenic -62694 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr2-5968 chr2 54485867 54486077 + 8.96 0.000 intron (NM_003128, intron 1 of 35) SVA_D|Retroposon|SVA 29645 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr4-4893 chr4 120145149 120145359 + 8.96 0.000 Intergenic MIR|SINE|MIR -78406 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr7-9749 chr7 158718031 158718241 + 8.96 0.000 Intergenic AluJr|SINE|Alu -13332 NM_001281933 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr3-3649 chr3 126438546 126438756 + 8.96 0.000 intron (NR_104249, intron 8 of 8) intron (NR_104249, intron 8 of 8) 37240 NR_104249 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr2-7437 chr2 11240942 11241152 + 8.96 0.000 intron (NM_001321643, intron 4 of 32) L1ME1|LINE|L1 85580 NR_104231 130814 Hs.274415 NM_152391 ENSG00000162976 SLC66A3 C2orf22|PQLC3 solute carrier family 66 member 3 protein-coding chr9-8531 chr9 126273217 126273427 + 8.96 0.000 intron (NR_121584, intron 1 of 2) AluJb|SINE|Alu 2593 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr12-6968 chr12 28599182 28599392 + 8.96 0.000 Intergenic Intergenic -408549 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr1-12251 chr1 220283460 220283670 + 8.96 0.000 Intergenic Intergenic -11112 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr2-12324 chr2 47720206 47720416 + 8.96 0.000 Intergenic AluJb|SINE|Alu -62771 NM_001281492 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr1-11991 chr1 90725460 90725670 + 8.96 0.000 Intergenic CpG -8263 NM_020063 343472 Hs.451956 NM_020063 ENSG00000143032 BARHL2 - BarH like homeobox 2 protein-coding chr17-2233 chr17 4498525 4498735 + 8.96 0.000 promoter-TSS (NM_001124758) promoter-TSS (NM_001124758) -251 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr1-15540 chr1 157509240 157509450 + 8.96 0.000 Intergenic Intergenic 43170 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr7-8442 chr7 47511960 47512170 + 8.96 0.000 intron (NM_022748, intron 2 of 30) intron (NM_022748, intron 2 of 30) -47262 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr5-5754 chr5 172415121 172415331 + 8.96 0.000 intron (NM_001017995, intron 2 of 12) intron (NM_001017995, intron 2 of 12) 39297 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr5-2137 chr5 81531060 81531270 + 8.96 0.000 intron (NM_012446, intron 4 of 16) AluJr|SINE|Alu -137031 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr8-3020 chr8 124006163 124006373 + 8.96 0.000 intron (NR_040044, intron 4 of 5) intron (NR_040044, intron 4 of 5) 34514 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr1-15486 chr1 155349450 155349660 + 8.96 0.000 exon (NM_001366177, exon 18 of 28) exon (NM_001366177, exon 18 of 28) -3110 NR_030282 693140 NR_030282 ENSG00000283701 MIR555 MIRN555|hsa-mir-555 microRNA 555 ncRNA chr16-3576 chr16 67387260 67387470 + 8.96 0.000 Intergenic Intergenic 6133 NM_015964 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr3-8393 chr3 99108598 99108808 + 8.96 0.000 Intergenic Intergenic -207008 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr11-5628 chr11 119742846 119743056 + 8.96 0.000 Intergenic Intergenic 13368 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr8-4106 chr8 69968679 69968889 + 8.96 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 102468 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr22-2439 chr22 19836589 19836799 + 8.96 0.000 intron (NM_053004, intron 2 of 7) L1MEf|LINE|L1 18180 NM_024627 79680 Hs.105642 NM_024627 ENSG00000215012 RTL10 BOP|C22orf29 retrotransposon Gag like 10 protein-coding chr6-7561 chr6 71919759 71919969 + 8.96 0.000 intron (NM_001350412, intron 1 of 2) L2|LINE|L2 33161 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr9-4212 chr9 37899102 37899312 + 8.96 0.000 intron (NM_033412, intron 2 of 2) L1M5|LINE|L1 4920 NM_033412 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr16-6558 chr16 65314461 65314671 + 8.96 0.000 intron (NR_027755, intron 7 of 8) intron (NR_027755, intron 7 of 8) -137993 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr7-8417 chr7 45994435 45994645 + 8.96 0.000 Intergenic L2|LINE|L2 -73268 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr4-8665 chr4 178663998 178664208 + 8.96 0.000 Intergenic Intergenic -756167 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr20-2792 chr20 56032499 56032709 + 8.96 0.000 Intergenic LTR76|LTR|ERV1 -27085 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr2-13695 chr2 165337237 165337447 + 8.96 0.000 intron (NM_001040143, intron 15 of 27) L1MEf|LINE|L1 43287 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chrX-4675 chrX 83418700 83418910 + 8.96 0.000 Intergenic L1PA13|LINE|L1 -89485 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr11-3850 chr11 72662381 72662591 + 8.96 0.000 intron (NM_002599, intron 1 of 30) intron (NM_002599, intron 1 of 30) 6578 NM_001146209 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr2-14115 chr2 201214073 201214283 + 8.96 0.000 intron (NM_032974, intron 9 of 9) intron (NM_032974, intron 9 of 9) -19265 NM_033355 841 Hs.599762 NM_001228 ENSG00000064012 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8 protein-coding chr1-9521 chr1 38931131 38931341 + 8.96 0.000 intron (NM_017821, intron 1 of 7) intron (NM_017821, intron 1 of 7) -1717 NM_001304746 54933 Hs.524626 NM_017821 ENSG00000158315 RHBDL2 RRP2 rhomboid like 2 protein-coding chr1-6863 chr1 111604979 111605189 + 8.96 0.000 intron (NR_034126, intron 1 of 4) intron (NR_034126, intron 1 of 4) 3234 NR_034126 100129269 Hs.689728 NR_034126 LINC01160 - long intergenic non-protein coding RNA 1160 ncRNA chr7-3996 chr7 139500134 139500344 + 8.96 0.000 Intergenic Intergenic -16566 NM_198508 346689 Hs.17572 NM_198508 ENSG00000188883 KLRG2 CLEC15B killer cell lectin like receptor G2 protein-coding chr10-3378 chr10 24344905 24345115 + 8.96 0.000 intron (NM_019590, intron 2 of 20) intron (NM_019590, intron 2 of 20) 69325 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr2-8666 chr2 149143912 149144122 + 8.96 0.000 intron (NM_001317004, intron 3 of 6) intron (NM_001317004, intron 3 of 6) 25843 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr5-3650 chr5 146860609 146860819 + 8.96 0.000 intron (NM_181678, intron 2 of 10) MamSINE1|SINE|tRNA-RTE 18071 NM_001271948 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr18-3259 chr18 50052667 50052877 + 8.96 0.000 intron (NM_001080467, intron 2 of 39) intron (NM_001080467, intron 2 of 39) 73791 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr1-3853 chr1 36343116 36343326 + 8.96 0.000 intron (NM_001282546, intron 10 of 10) intron (NM_001282546, intron 10 of 10) -19067 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr12-6359 chr12 61526177 61526387 + 8.96 0.000 Intergenic LTR16C|LTR|ERVL 666557 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr4-5679 chr4 20318806 20319016 + 8.96 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 67006 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr5-4235 chr5 133346343 133346553 + 8.96 0.000 intron (NM_015082, intron 4 of 15) HAL1ME|LINE|L1 81258 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr6-4349 chr6 18389042 18389252 + 8.96 0.000 intron (NM_182757, intron 1 of 7) Eulor11|DNA|DNA 1797 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr4-5697 chr4 29983789 29983999 + 8.96 0.000 Intergenic L1M1|LINE|L1 -736475 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr17-5422 chr17 34890964 34891174 + 8.96 0.000 Intergenic Intergenic 70391 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr3-7137 chr3 184923016 184923226 + 8.96 0.000 intron (NR_146113, intron 30 of 48) intron (NR_146113, intron 30 of 48) 110614 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chrX-5248 chrX 137444333 137444543 + 8.96 0.000 Intergenic Intergenic -121689 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr20-2388 chr20 18107742 18107952 + 8.96 0.000 Intergenic AluSx|SINE|Alu -30016 NM_001164811 100303755 Hs.488051 NM_001164811 ENSG00000232838 PET117 CSRP2BP PET117 cytochrome c oxidase chaperone protein-coding chr7-9449 chr7 134571521 134571731 + 8.96 0.000 exon (NM_001367820, exon 5 of 11) exon (NM_001367820, exon 5 of 11) 22516 NR_160302 441282 Hs.729418 NM_001080538 ENSG00000227471 AKR1B15 AKR1B10L|AKR1B10L, AK1R1B7|AKR1R1B7 aldo-keto reductase family 1 member B15 protein-coding chr19-5983 chr19 949685 949895 + 8.96 0.000 intron (NM_005224, intron 3 of 8) AluSx1|SINE|Alu 23755 NM_005224 1820 Hs.501296 NM_005224 ENSG00000116017 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT-rich interaction domain 3A protein-coding chr5-3244 chr5 96125675 96125885 + 8.96 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 46642 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr9-3130 chr9 90966515 90966725 + 8.96 0.000 Intergenic Intergenic 108512 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr17-2806 chr17 8839402 8839612 + 8.96 0.000 intron (NM_001010855, intron 3 of 19) intron (NM_001010855, intron 3 of 19) 28170 NM_001010855 146850 Hs.255809 NM_001010855 ENSG00000276231 PIK3R6 C17orf38|HsT41028|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase regulatory subunit 6 protein-coding chr6-3115 chr6 99306536 99306746 + 8.96 0.000 intron (NR_144463, intron 4 of 5) intron (NR_144463, intron 4 of 5) 43033 NM_032511 84553 Hs.573245 NM_032511 ENSG00000146267 FAXC C6orf168|dJ273F20 failed axon connections homolog, metaxin like GST domain containing protein-coding chr10-8486 chr10 89235267 89235477 + 8.96 0.000 intron (NM_001288979, intron 1 of 7) intron (NM_001288979, intron 1 of 7) 16403 NM_001127605 3988 Hs.643030 NM_000235 ENSG00000107798 LIPA CESD|LAL lipase A, lysosomal acid type protein-coding chr8-6927 chr8 102975067 102975277 + 8.96 0.000 intron (NR_126338, intron 3 of 3) intron (NR_126338, intron 3 of 3) -45911 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr11-4415 chr11 85962021 85962231 + 8.96 0.000 intron (NM_001008660, intron 19 of 19) intron (NM_001008660, intron 19 of 19) 106958 NM_001206946 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr15-3878 chr15 93072231 93072441 + 8.96 0.000 intron (NM_001166286, intron 1 of 2) intron (NM_001166286, intron 1 of 2) 820 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr1-12908 chr1 114044795 114045005 + 8.96 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 65426 NM_001286352 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr3-3863 chr3 37773096 37773306 + 8.96 0.000 intron (NR_110531, intron 3 of 3) intron (NR_110531, intron 3 of 3) 88579 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr17-8073 chr17 53428339 53428549 + 8.96 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -394483 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr1-9022 chr1 11570447 11570657 + 8.96 0.000 Intergenic Intergenic -38979 NR_104624 101929181 Hs.568616 NR_104624 ENSG00000235643 LINC01647 - long intergenic non-protein coding RNA 1647 ncRNA chr9-4548 chr9 84340056 84340266 + 8.96 0.000 intron (NM_022127, intron 2 of 18) intron (NM_022127, intron 2 of 18) 597 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr15-3385 chr15 88087271 88087481 + 8.96 0.000 intron (NM_001007156, intron 13 of 15) intron (NM_001007156, intron 13 of 15) 118598 NM_001320135 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr22-2368 chr22 44945026 44945236 + 8.96 0.000 intron (NM_001284296, intron 2 of 13) intron (NM_001284296, intron 2 of 13) 58488 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr4-2806 chr4 34942274 34942484 + 8.96 0.000 Intergenic L2a|LINE|L2 -672632 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr3-4719 chr3 61463148 61463358 + 8.96 0.000 Intergenic Intergenic -98318 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr1-11631 chr1 242063556 242063766 + 8.96 0.000 Intergenic Intergenic -64563 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr2-4626 chr2 161847384 161847594 + 8.96 0.000 intron (NM_001354443, intron 5 of 25) L1PA15|LINE|L1 223073 NM_001354455 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr11-6063 chr11 31874598 31874808 + 8.96 0.000 intron (NR_033971, intron 1 of 2) intron (NR_033971, intron 1 of 2) 48136 NR_117094 103157000 NR_117094 ENSG00000281880 PAUPAR - PAX6 upstream antisense RNA ncRNA chr1-3773 chr1 6254053 6254263 + 8.96 0.000 intron (NM_207370, intron 2 of 5) intron (NM_207370, intron 2 of 5) 6940 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr12-4260 chr12 115753253 115753463 + 8.96 0.000 Intergenic Intergenic 395296 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr2-3837 chr2 28412359 28412569 + 8.96 0.000 3' UTR (NM_005253, exon 4 of 4) 3' UTR (NM_005253, exon 4 of 4) -17792 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr3-10453 chr3 133335097 133335307 + 8.96 0.000 intron (NM_001282865, intron 2 of 3) L1M6|LINE|L1 -64854 NM_003571 8419 Hs.659862 NM_003571 ENSG00000170819 BFSP2 CP47|CP49|CTRCT12|LIFL-L|PHAKOSIN beaded filament structural protein 2 protein-coding chr8-4444 chr8 112530841 112531051 + 8.96 0.000 intron (NM_001363185, intron 25 of 66) L1PA3|LINE|L1 -112547 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr8-5588 chr8 90138946 90139156 + 8.96 0.000 Intergenic L1MEc|LINE|L1 -56172 NM_001366795 793 Hs.65425 NM_004929 ENSG00000104327 CALB1 CALB|D-28K calbindin 1 protein-coding chr13-2519 chr13 60090688 60090898 + 8.96 0.000 intron (NM_001258367, intron 2 of 25) intron (NM_001258367, intron 2 of 25) -53905 NR_046540 100874196 Hs.662188 NR_046540 ENSG00000223815 DIAPH3-AS2 DIPAH3-AS2 DIAPH3 antisense RNA 2 ncRNA chr8-4290 chr8 96510715 96510925 + 8.96 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) 17007 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr8-2289 chr8 121619729 121619939 + 8.96 0.000 intron (NM_005328, intron 2 of 3) intron (NM_005328, intron 2 of 3) -19512 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr4-7797 chr4 97910315 97910525 + 8.96 0.000 intron (NM_174952, intron 8 of 10) L1MDb|LINE|L1 233056 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr8-4746 chr8 142571335 142571545 + 8.96 0.000 Intergenic Intergenic 43039 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr1-3701 chr1 198208958 198209168 + 8.96 0.000 intron (NM_133494, intron 1 of 9) (TA)n|Simple_repeat|Simple_repeat 52065 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr17-6988 chr17 50135835 50136045 + 8.96 0.000 intron (NM_032595, intron 8 of 9) intron (NM_032595, intron 8 of 9) -5780 NM_001257359 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr5-3657 chr5 151448259 151448469 + 8.96 0.000 intron (NM_001349740, intron 1 of 11) intron (NM_001349740, intron 1 of 11) 761 NM_001349740 206358 Hs.269004 NM_078483 ENSG00000123643 SLC36A1 Dct1|LYAAT1|PAT1|TRAMD3 solute carrier family 36 member 1 protein-coding chr7-3882 chr7 108104007 108104217 + 8.96 0.000 intron (NM_001318048, intron 9 of 17) intron (NM_001318048, intron 9 of 17) 26249 NM_001318047 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr15-3617 chr15 70142225 70142435 + 8.96 0.000 Intergenic MIR3|SINE|MIR -44413 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr1-8355 chr1 59592969 59593179 + 8.96 0.000 intron (NM_001350794, intron 8 of 14) intron (NM_001350794, intron 8 of 14) 77444 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr9-7480 chr9 29002012 29002222 + 8.96 0.000 intron (NM_001354574, intron 1 of 5) intron (NM_001354574, intron 1 of 5) -113162 NR_030618 100126316 NR_030618 ENSG00000215939 MIR873 MIRN873|hsa-mir-873|mir-873 microRNA 873 ncRNA chr5-6106 chr5 23029036 23029246 + 8.96 0.000 Intergenic Intergenic -175797 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr3-6045 chr3 50187860 50188070 + 8.96 0.000 exon (NM_001318800, exon 18 of 18) exon (NM_001318800, exon 18 of 18) -3645 NM_000172 2779 Hs.517978 NM_000172 ENSG00000114349 GNAT1 CSNB1G|CSNBAD3|GBT1|GNATR G protein subunit alpha transducin 1 protein-coding chr2-5673 chr2 201579653 201579863 + 8.96 0.000 intron (NM_001168221, intron 5 of 15) L1MC5a|LINE|L1 39420 NM_001168217 151254 Hs.335788 NM_152525 ENSG00000155754 C2CD6 ALS2CR11 C2 calcium dependent domain containing 6 protein-coding chr22-2580 chr22 29218933 29219143 + 8.96 0.000 intron (NM_001267895, intron 3 of 14) intron (NM_001267895, intron 3 of 14) 13142 NM_133455 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr7-8202 chr7 31702323 31702533 + 8.96 0.000 intron (NM_001145123, intron 3 of 3) intron (NM_001145123, intron 3 of 3) 15213 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chrX-1347 chrX 137641018 137641228 + 8.96 0.000 Intergenic 7SK|RNA|RNA 74996 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr7-5258 chr7 19541786 19541996 + 8.96 0.000 Intergenic Intergenic 163545 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr19-2476 chr19 3326951 3327161 + 8.96 0.000 Intergenic Intergenic -32574 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr12-6042 chr12 111312130 111312340 + 8.96 0.000 intron (NM_015267, intron 16 of 21) intron (NM_015267, intron 16 of 21) 8093 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr8-4226 chr8 87120191 87120401 + 8.96 0.000 intron (NM_173538, intron 4 of 10) L1M2|LINE|L1 253881 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr4-5681 chr4 20577039 20577249 + 8.96 0.000 intron (NM_001289135, intron 28 of 35) intron (NM_001289135, intron 28 of 35) 48869 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr3-10525 chr3 138429337 138429547 + 8.96 0.000 Intergenic Intergenic -5131 NR_136409 83850 Hs.477711 NM_031913 ENSG00000158220 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin 3 protein-coding chr6-4324 chr6 16391833 16392043 + 8.96 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 153351 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr17-6906 chr17 34567065 34567275 + 8.96 0.000 Intergenic Intergenic 12199 NR_160787 400591 Hs.514090 NM_207454 C17orf102 - chromosome 17 open reading frame 102 ncRNA chr2-8579 chr2 137023621 137023831 + 8.96 0.000 intron (NM_001316349, intron 2 of 27) intron (NM_001316349, intron 2 of 27) 258181 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr6-7346 chr6 46730013 46730223 + 8.96 0.000 intron (NM_001168357, intron 1 of 11) L3|LINE|CR1 5257 NM_005084 7941 Hs.584823 NM_005084 ENSG00000146070 PLA2G7 LDL-PLA2|LP-PLA2|PAFAD|PAFAH phospholipase A2 group VII protein-coding chr10-5188 chr10 59735409 59735619 + 8.96 0.000 Intergenic Intergenic 17941 NM_001304732 100507027 Hs.648790 NM_001304731 ENSG00000227877 MRLN LINC00948|Linc-RAM|M1|MLN|MUSER1 myoregulin protein-coding chr8-4114 chr8 71164805 71165015 + 8.96 0.000 Intergenic Intergenic 191796 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr18-3388 chr18 60019422 60019632 + 8.96 0.000 Intergenic Intergenic 119531 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr9-3082 chr9 18721834 18722044 + 8.96 0.000 intron (NM_001040272, intron 15 of 28) intron (NM_001040272, intron 15 of 28) 148633 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr10-5334 chr10 71449147 71449357 + 8.96 0.000 intron (NM_052836, intron 3 of 12) intron (NM_052836, intron 3 of 12) 52318 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr5-4143 chr5 89133036 89133246 + 8.96 0.000 intron (NR_136221, intron 4 of 6) L2b|LINE|L2 -229036 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr5-4446 chr5 3294899 3295109 + 8.96 0.000 Intergenic X6B_LINE|LINE|CR1 117169 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr15-5019 chr15 82060155 82060365 + 8.96 0.000 Intergenic Intergenic -14242 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr10-6147 chr10 133483455 133483665 + 8.96 0.000 Intergenic L1MA4A|LINE|L1 29632 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr14-2871 chr14 33068038 33068248 + 8.96 0.000 intron (NM_001164749, intron 2 of 11) intron (NM_001164749, intron 2 of 11) 129264 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr2-6334 chr2 75632258 75632468 + 8.96 0.000 Intergenic Intergenic -14420 NM_014763 9801 Hs.44024 NM_014763 ENSG00000115364 MRPL19 L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15 mitochondrial ribosomal protein L19 protein-coding chr14-2834 chr14 26235807 26236017 + 8.96 0.000 Intergenic Intergenic 317518 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chrX-2629 chrX 109847360 109847570 + 8.96 0.000 Intergenic Intergenic -22936 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr5-4003 chr5 24653874 24654084 + 8.96 0.000 Intergenic HERVK3-int|LTR|ERVK -9001 NM_001317224 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr12-3683 chr12 132429188 132429398 + 8.96 0.000 Intergenic Intergenic -60858 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr18-2676 chr18 56374078 56374288 + 8.96 0.000 Intergenic Intergenic -182921 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr10-3731 chr10 116212824 116213034 + 8.96 0.000 intron (NM_005264, intron 4 of 10) intron (NM_005264, intron 4 of 10) -18140 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr3-11031 chr3 182520850 182521060 + 8.96 0.000 Intergenic L2a|LINE|L2 -13831 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr4-5079 chr4 146272964 146273174 + 8.96 0.000 intron (NM_001029998, intron 10 of 11) intron (NM_001029998, intron 10 of 11) 58531 NM_001354631 345051 Hs.170876 NM_001354631 ENSG00000250673 REELD1 - reeler domain containing 1 protein-coding chr9-3454 chr9 703583 703793 + 8.96 0.000 intron (NM_001354337, intron 1 of 10) intron (NM_001354337, intron 1 of 10) -2989 NM_001354341 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr5-2313 chr5 58072457 58072667 + 8.96 0.000 Intergenic Intergenic 49779 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr12-5538 chr12 132533842 132534052 + 8.96 0.000 intron (NM_001142641, intron 4 of 16) intron (NM_001142641, intron 4 of 16) 43796 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr18-3181 chr18 44326025 44326235 + 8.96 0.000 intron (NR_110792, intron 3 of 4) intron (NR_110792, intron 3 of 4) 205567 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr6-5873 chr6 40406560 40406770 + 8.96 0.000 intron (NM_020737, intron 2 of 2) L3b|LINE|CR1 28328 NR_160958 732253 Hs.180197 NM_001359094 TDRG1 LINC00532|lincRNA-NR_024015 testis development related 1 ncRNA chr3-3692 chr3 160876642 160876852 + 8.96 0.000 intron (NR_134243, intron 1 of 5) intron (NR_134243, intron 1 of 5) 6149 NR_134243 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr4-8328 chr4 145692027 145692237 + 8.96 0.000 intron (NM_001080531, intron 1 of 5) L1ME3B|LINE|L1 11928 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr2-9131 chr2 208467998 208468208 + 8.96 0.000 intron (NM_005048, intron 9 of 12) intron (NM_005048, intron 9 of 12) 61273 NM_005048 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr4-7297 chr4 53348045 53348255 + 8.96 0.000 intron (NM_152540, intron 2 of 8) intron (NM_152540, intron 2 of 8) 17911 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr6-6669 chr6 163573829 163574039 + 8.96 0.000 3' UTR (NM_001301085, exon 8 of 8) 3' UTR (NM_001301085, exon 8 of 8) 97550 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr14-3317 chr14 86706232 86706442 + 8.96 0.000 Intergenic Intergenic -199441 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr18-2786 chr18 2730483 2730693 + 8.96 0.000 intron (NM_015295, intron 24 of 47) intron (NM_015295, intron 24 of 47) 74701 NM_015295 23347 Hs.8118 NM_015295 ENSG00000101596 SMCHD1 BAMS|FSHD2 structural maintenance of chromosomes flexible hinge domain containing 1 protein-coding chr11-9057 chr11 29328956 29329166 + 8.96 0.000 Intergenic Intergenic -265352 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr2-12887 chr2 98550405 98550615 + 8.96 0.000 intron (NM_001134224, intron 14 of 25) intron (NM_001134224, intron 14 of 25) 58002 NM_001008215 493753 Hs.596537 NM_001008215 ENSG00000183513 COA5 6330578E17Rik|C2orf64|CEMCOX3|Pet191 cytochrome c oxidase assembly factor 5 protein-coding chr22-1776 chr22 29108774 29108984 + 8.96 0.000 intron (NM_001039570, intron 3 of 8) AluJo|SINE|Alu 35844 NM_032045 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 ECTD13|KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr4-5923 chr4 147788645 147788855 + 8.96 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) 6155 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr14-1123 chr14 91243734 91243944 + 8.96 0.000 intron (NM_001348437, intron 1 of 2) intron (NM_001348437, intron 1 of 2) 865 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr5-4740 chr5 45830669 45830879 + 8.96 0.000 Intergenic Intergenic -134394 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr2-2437 chr2 53036062 53036272 + 8.96 0.000 Intergenic Intergenic -333552 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chrX-622 chrX 44152474 44152684 + 8.96 0.000 intron (NM_025184, intron 14 of 14) intron (NM_025184, intron 14 of 14) -179189 NM_000266 4693 Hs.522615 NM_000266 ENSG00000124479 NDP EVR2|FEVR|ND norrin cystine knot growth factor NDP protein-coding chr1-10768 chr1 201014089 201014299 + 8.96 0.000 intron (NM_001252103, intron 1 of 33) intron (NM_001252103, intron 1 of 33) 9520 NM_001252102 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr2-14603 chr2 232999467 232999677 + 8.96 0.000 intron (NM_019850, intron 1 of 14) intron (NM_019850, intron 1 of 14) -13042 NR_136325 101928881 Hs.570311 NR_136325 ENSG00000222001 LOC101928881 - uncharacterized LOC101928881 ncRNA chr13-1152 chr13 32911594 32911804 + 8.96 0.000 promoter-TSS (NR_047020) promoter-TSS (NR_047020) -47 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr4-3452 chr4 96362889 96363099 + 8.96 0.000 intron (NR_147149, intron 1 of 3) MIRb|SINE|MIR 52291 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chrX-559 chrX 30971874 30972084 + 8.96 0.000 Intergenic Intergenic -82725 NM_152787 257397 Hs.188256 NM_152787 ENSG00000157625 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 protein-coding chr1-10323 chr1 151972968 151973178 + 8.96 0.000 Intergenic Intergenic 20786 NM_002966 6281 Hs.143873 NM_002966 ENSG00000197747 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding chr7-5426 chr7 36128789 36128999 + 8.96 0.000 Intergenic Intergenic -24360 NM_030636 80820 Hs.487994 NM_030636 ENSG00000122547 EEPD1 HSPC107 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding chr1-12990 chr1 156444070 156444280 + 8.96 0.000 Intergenic AluSx|SINE|Alu -14627 NR_135262 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr4-5021 chr4 139687313 139687523 + 8.96 0.000 intron (NM_001204368, intron 2 of 3) intron (NM_001204368, intron 2 of 3) 21599 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr2-8298 chr2 105114627 105114837 + 8.96 0.000 Intergenic Intergenic -11788 NR_110227 101927492 Hs.469537 NR_110227 ENSG00000231851 UTAT33 - uncharacterized LOC101927492 ncRNA chr16-1755 chr16 88377501 88377711 + 8.96 0.000 Intergenic Intergenic -49865 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr20-1975 chr20 40321900 40322110 + 8.96 0.000 Intergenic AluSz|SINE|Alu 317544 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr1-7490 chr1 109782484 109782694 + 8.96 0.000 Intergenic Charlie19a|DNA|hAT-Charlie -18666 NM_001319952 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr8-6211 chr8 37253031 37253241 + 8.96 0.000 Intergenic Intergenic 240777 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr11-6012 chr11 24364328 24364538 + 8.96 0.000 Intergenic AluJr|SINE|Alu -132620 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr1-5736 chr1 94021154 94021364 + 8.96 0.000 exon (NM_000350, exon 35 of 50) exon (NM_000350, exon 35 of 50) 99889 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chrX-2370 chrX 68656463 68656673 + 8.96 0.000 intron (NM_014725, intron 1 of 13) L1PA5|LINE|L1 8899 NM_014725 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr1-14966 chr1 88843273 88843483 + 8.96 0.000 Intergenic AluSq2|SINE|Alu 48189 NM_001514 2959 Hs.481852 NM_001514 ENSG00000137947 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding chr3-3065 chr3 129025520 129025730 + 8.96 0.000 intron (NM_024768, intron 2 of 7) L2c|LINE|L2 -21623 NM_001348521 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr9-4758 chr9 132513519 132513729 + 8.96 0.000 intron (NM_207417, intron 4 of 6) intron (NM_207417, intron 4 of 6) -68982 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr1-9944 chr1 78053282 78053492 + 8.96 0.000 intron (NM_017655, intron 1 of 5) MER90a|LTR|ERV1 7421 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr4-4842 chr4 109909753 109909963 + 8.96 0.000 Intergenic Intergenic -3025 NM_001963 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr4-7249 chr4 46758892 46759102 + 8.96 0.000 intron (NM_130902, intron 2 of 2) intron (NM_130902, intron 2 of 2) 150248 NM_130902 170712 Hs.479656 NM_130902 ENSG00000170516 COX7B2 - cytochrome c oxidase subunit 7B2 protein-coding chr12-4429 chr12 9740686 9740896 + 8.96 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -7492 NM_172004 160365 Hs.560087 NM_172004 ENSG00000184293 CLECL1 DCAL-1|DCAL1 C-type lectin like 1 protein-coding chr17-7230 chr17 1240495 1240705 + 8.96 0.000 Intergenic LTR8|LTR|ERV1 -10878 NM_001322842 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr16-3511 chr16 22904795 22905005 + 8.96 0.000 intron (NM_006043, intron 1 of 1) intron (NM_006043, intron 1 of 1) 90738 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr13-4445 chr13 111969765 111969975 + 8.96 0.000 Intergenic Intergenic -2440 NR_120392 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr3-8145 chr3 29494047 29494257 + 8.96 0.000 intron (NM_001003792, intron 3 of 13) intron (NM_001003792, intron 3 of 13) 212840 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr3-8539 chr3 143614168 143614378 + 8.96 0.000 intron (NM_173653, intron 6 of 15) intron (NM_173653, intron 6 of 15) 234195 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr2-8537 chr2 132175430 132175640 + 8.96 0.000 intron (NR_152415, intron 1 of 5) LTR5B|LTR|ERVK -13583 NR_027019 554226 Hs.380689 NM_001358416 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B like protein-coding chr17-4943 chr17 77728931 77729141 + 8.96 0.000 promoter-TSS (NR_104134) promoter-TSS (NR_104134) -477 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr3-6009 chr3 48820738 48820948 + 8.96 0.000 intron (NM_001321982, intron 1 of 11) intron (NM_001321982, intron 1 of 11) 27031 NM_001321989 5576 Hs.631923 NM_004157 ENSG00000114302 PRKAR2A PKR2|PRKAR2 protein kinase cAMP-dependent type II regulatory subunit alpha protein-coding chr4-3393 chr4 36253133 36253343 + 8.96 0.000 intron (NR_122079, intron 3 of 4) AluSx|SINE|Alu -3280 NR_122080 439933 Hs.591071 NR_122079 ENSG00000247193 LOC439933 - uncharacterized LOC439933 ncRNA chr3-5806 chr3 28611158 28611368 + 8.96 0.000 intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 35985 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr12-5084 chr12 93918232 93918442 + 8.96 0.000 intron (NR_135017, intron 1 of 2) intron (NR_135017, intron 1 of 2) 25269 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr15-3211 chr15 73021253 73021463 + 8.96 0.000 Intergenic Intergenic -31105 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr4-3636 chr4 15771259 15771469 + 8.96 0.000 Intergenic Intergenic -6964 NR_132660 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr8-6466 chr8 61822054 61822264 + 8.96 0.000 Intergenic AluSx1|SINE|Alu -67680 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr1-15867 chr1 182060207 182060417 + 8.96 0.000 intron (NM_001009992, intron 1 of 1) intron (NM_001009992, intron 1 of 1) 1400 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr7-5479 chr7 41941254 41941464 + 8.96 0.000 Intergenic Intergenic -238269 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr2-4371 chr2 26935673 26935883 + 8.96 0.000 intron (NM_020134, intron 8 of 12) LTR78B|LTR|ERV1 -34859 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chrX-3832 chrX 150932365 150932575 + 8.96 0.000 Intergenic AluJr|SINE|Alu -33654 NM_001242614 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr3-8358 chr3 78974334 78974544 + 8.96 0.000 intron (NM_002941, intron 3 of 30) intron (NM_002941, intron 3 of 30) 45020 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr7-8062 chr7 23220668 23220878 + 8.96 0.000 Intergenic LTR16D|LTR|ERVL -26002 NM_002510 10457 Hs.190495 NM_002510 ENSG00000136235 GPNMB HGFIN|NMB|PLCA3 glycoprotein nmb protein-coding chr10-6226 chr10 59551575 59551785 + 8.96 0.000 Intergenic Intergenic 158211 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr10-8228 chr10 73666458 73666668 + 8.96 0.000 Intergenic Intergenic -10534 NM_001114133 79933 Hs.645273 NM_024875 ENSG00000166317 SYNPO2L - synaptopodin 2 like protein-coding chr15-5239 chr15 97497190 97497400 + 8.96 0.000 intron (NR_120324, intron 2 of 4) ERVL-E-int|LTR|ERVL 24516 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chr4-7984 chr4 114117023 114117233 + 8.96 0.000 Intergenic LTR82A|LTR|ERVL -137481 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr12-3878 chr12 114554502 114554712 + 8.96 0.000 Intergenic MER21C|LTR|ERVL 129568 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr7-4082 chr7 22589885 22590095 + 8.96 0.000 Intergenic Intergenic 26653 NR_038393 100506178 Hs.668122 NR_038393 ENSG00000232759 LOC100506178 - uncharacterized LOC100506178 ncRNA chr5-7632 chr5 50847869 50848079 + 8.96 0.000 Intergenic Intergenic 122213 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chr10-3657 chr10 100746757 100746967 + 8.96 0.000 intron (NM_003988, intron 1 of 10) intron (NM_003988, intron 1 of 10) 1151 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr11-9739 chr11 68710391 68710601 + 8.96 0.000 intron (NM_004923, intron 9 of 9) intron (NM_004923, intron 9 of 9) 25952 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr3-5237 chr3 100259728 100259938 + 8.96 0.000 Intergenic Intergenic -1159 NM_018309 55773 Hs.477003 NM_018309 ENSG00000036054 TBC1D23 NS4ATP1|PCH11 TBC1 domain family member 23 protein-coding chr11-7756 chr11 77747598 77747808 + 8.96 0.000 intron (NM_016578, intron 2 of 15) intron (NM_016578, intron 2 of 15) 73131 NM_016578 51773 Hs.420229 NM_016578 ENSG00000048649 RSF1 HBXAP|RSF-1|XAP8|p325 remodeling and spacing factor 1 protein-coding chr22-2939 chr22 47596635 47596845 + 8.96 0.000 Intergenic Intergenic 34829 NR_033377 400932 Hs.561058 NM_001001693 ENSG00000205634 LINC00898 - long intergenic non-protein coding RNA 898 ncRNA chr13-2416 chr13 44840115 44840325 + 8.96 0.000 Intergenic Intergenic -30590 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr19-5452 chr19 33391274 33391484 + 8.96 0.000 exon (NM_000285, exon 13 of 15) exon (NM_000285, exon 13 of 15) 16855 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr4-7005 chr4 23890829 23891039 + 8.96 0.000 promoter-TSS (NM_013261) promoter-TSS (NM_013261) -887 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr22-4302 chr22 50102084 50102294 + 8.96 0.000 intron (NM_018995, intron 3 of 26) intron (NM_018995, intron 3 of 26) 11933 NM_001164105 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chrX-2746 chrX 128397467 128397677 + 8.96 0.000 Intergenic Intergenic -345169 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr4-4274 chr4 24164203 24164413 + 8.96 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) -274261 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr19-3011 chr19 47093202 47093412 + 8.96 0.000 intron (NM_015168, intron 4 of 14) intron (NM_015168, intron 4 of 14) 20469 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chrX-849 chrX 124202029 124202239 + 8.96 0.000 Intergenic L1MB4|LINE|L1 -130526 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr2-3501 chr2 218043931 218044141 + 8.96 0.000 intron (NR_034176, intron 2 of 13) MER52D|LTR|ERV1 9102 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr7-5182 chr7 8128991 8129201 + 8.96 0.000 intron (NM_001350836, intron 13 of 14) intron (NM_001350836, intron 13 of 14) 132956 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr9-3541 chr9 36897150 36897360 + 8.96 0.000 intron (NR_103999, intron 6 of 8) intron (NR_103999, intron 6 of 8) -3724 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr7-4425 chr7 106623843 106624053 + 8.96 0.000 Intergenic Intergenic 37210 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr10-5207 chr10 61628923 61629133 + 8.96 0.000 Intergenic Intergenic -33901 NM_001366908 219621 Hs.673160 NM_173554 ENSG00000183346 CABCOCO1 C10orf107 ciliary associated calcium binding coiled-coil 1 protein-coding chr11-5110 chr11 122099436 122099646 + 8.96 0.000 TTS (NR_029671) TTS (NR_029671) 303 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr2-11583 chr2 1771822 1772032 + 8.96 0.000 Intergenic Intergenic -27412 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr9-6233 chr9 122114844 122115054 + 8.96 0.000 Intergenic (GTCTCT)n|Simple_repeat|Simple_repeat 5218 NR_039690 100616312 NR_039690 ENSG00000266583 MIR4478 mir-4478 microRNA 4478 ncRNA chr8-3247 chr8 143625075 143625285 + 8.96 0.000 Intergenic AluSz|SINE|Alu -7631 NM_001317783 7264 Hs.404119 NM_003313 ENSG00000104522 TSTA3 FX|P35B|SDR4E1 tissue specific transplantation antigen P35B protein-coding chr2-6486 chr2 172701339 172701549 + 8.96 0.000 Intergenic Intergenic -34401 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr5-1737 chr5 168048119 168048329 + 8.96 0.000 intron (NM_001368145, intron 5 of 26) intron (NM_001368145, intron 5 of 26) -117621 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr10-2196 chr10 29735425 29735635 + 8.96 0.000 intron (NM_001323599, intron 1 of 38) CpG 271 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr19-4561 chr19 10688779 10688989 + 8.96 0.000 intron (NM_012218, intron 19 of 19) intron (NM_012218, intron 19 of 19) -12555 NM_031209 81890 Hs.631638 NM_031209 ENSG00000213339 QTRT1 FP3235|TGT|TGUT queuine tRNA-ribosyltransferase catalytic subunit 1 protein-coding chr5-5387 chr5 134401516 134401726 + 8.96 0.000 TTS (NM_080656) TTS (NM_080656) 10260 NM_080656 91368 Hs.156506 NM_080656 ENSG00000237190 CDKN2AIPNL C2AIL CDKN2A interacting protein N-terminal like protein-coding chr1-16113 chr1 204426028 204426238 + 8.96 0.000 intron (NM_002646, intron 32 of 33) intron (NM_002646, intron 32 of 33) -14316 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chrX-4292 chrX 42599683 42599893 + 8.96 0.000 Intergenic LTR86A2|LTR|ERVL 178375 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr9-3988 chr9 545488 545698 + 8.96 0.000 intron (NM_001256876, intron 5 of 15) intron (NM_001256876, intron 5 of 15) 41038 NM_001354331 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr3-4857 chr3 158343303 158343513 + 8.96 0.000 intron (NM_001271838, intron 5 of 9) L1MEc|LINE|L1 -183300 NR_148407 110599565 NR_148407 UC.134 - long non-coding RNA uc.134 ncRNA chr13-3410 chr13 97548937 97549147 + 8.96 0.000 Intergenic MLT2F|LTR|ERVL 114873 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr7-4929 chr7 134452750 134452960 + 8.96 0.000 intron (NM_001346142, intron 1 of 9) intron (NM_001346142, intron 1 of 9) 6245 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr3-9340 chr3 46222523 46222733 + 8.96 0.000 Intergenic Intergenic -14315 NM_001295 1230 Hs.301921 NM_001295 ENSG00000163823 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 C-C motif chemokine receptor 1 protein-coding chr13-3593 chr13 28057075 28057285 + 8.96 0.000 intron (NM_004119, intron 4 of 23) intron (NM_004119, intron 4 of 23) 43396 NR_130706 2322 Hs.507590 NM_004119 ENSG00000122025 FLT3 CD135|FLK-2|FLK2|STK1 fms related tyrosine kinase 3 protein-coding chr8-7099 chr8 118438898 118439108 + 8.96 0.000 intron (NM_001349811, intron 3 of 4) intron (NM_001349811, intron 3 of 4) -181998 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr11-10080 chr11 85267182 85267392 + 8.96 0.000 intron (NM_001142699, intron 4 of 27) MLT1A0|LTR|ERVL-MaLR -343866 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr14-3814 chr14 69557537 69557747 + 8.96 0.000 Intergenic Intergenic 17229 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr20-3041 chr20 63566032 63566242 + 8.96 0.000 exon (NM_033405, exon 3 of 14) exon (NM_033405, exon 3 of 14) 1617 NM_033405 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr1-6005 chr1 53097872 53098082 + 8.96 0.000 intron (NR_109858, intron 5 of 10) intron (NR_109858, intron 5 of 10) 35764 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr1-5149 chr1 157074458 157074668 + 8.96 0.000 Intergenic Intergenic 25245 NM_001004341 440695 Hs.127138 NM_001004341 ENSG00000253831 ETV3L - ETS variant 3 like protein-coding chr1-10881 chr1 206028308 206028518 + 8.96 0.000 Intergenic MIR3|SINE|MIR -4518 NM_001910 1510 Hs.644082 NM_001910 ENSG00000196188 CTSE CATE cathepsin E protein-coding chr12-4218 chr12 104674134 104674344 + 8.96 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 82606 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr4-3795 chr4 107952442 107952652 + 8.96 0.000 3' UTR (NM_183075, exon 5 of 5) 3' UTR (NM_183075, exon 5 of 5) -20428 NR_125929 101929595 Hs.678014 NR_125929 ENSG00000245293 LOC101929595 - uncharacterized LOC101929595 ncRNA chr20-1011 chr20 4015083 4015293 + 8.96 0.000 5' UTR (NM_007219, exon 1 of 6) 5' UTR (NM_007219, exon 1 of 6) 370 NM_001134338 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr14-3131 chr14 67774970 67775180 + 8.96 0.000 exon (NM_015346, exon 27 of 42) exon (NM_015346, exon 27 of 42) 41515 NM_015346 23503 Hs.98041 NM_015346 ENSG00000072121 ZFYVE26 FYVE-CENT|SPG15 zinc finger FYVE-type containing 26 protein-coding chr16-3531 chr16 30958412 30958622 + 8.96 0.000 intron (NM_014712, intron 1 of 18) intron (NM_014712, intron 1 of 18) 763 NM_014712 9739 Hs.297483 NM_014712 ENSG00000099381 SETD1A KMT2F|Set1|Set1A SET domain containing 1A, histone lysine methyltransferase protein-coding chr7-6159 chr7 127486157 127486367 + 8.96 0.000 TTS (NR_110024) TTS (NR_110024) 9379 NR_110024 100506682 Hs.148450 NR_110024 ENSG00000226770 LOC100506682 - uncharacterized LOC100506682 ncRNA chr6-8263 chr6 138805011 138805221 + 8.96 0.000 intron (NM_001195037, intron 1 of 20) L1ME3B|LINE|L1 9005 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr3-6747 chr3 140034702 140034912 + 8.96 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 99622 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr20-4167 chr20 44529732 44529942 + 8.96 0.000 Intergenic AluY|SINE|Alu -1944 NM_001281444 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr5-5041 chr5 89458512 89458722 + 8.96 0.000 intron (NR_136221, intron 5 of 6) intron (NR_136221, intron 5 of 6) -554512 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr2-7258 chr2 231449957 231450167 + 8.96 0.000 Intergenic AluJb|SINE|Alu 5874 NR_002921 654321 Hs.674388 NR_002921 ENSG00000206885 SNORA75 SNORA75A|U23 small nucleolar RNA, H/ACA box 75 snoRNA chr8-3794 chr8 26727327 26727537 + 8.96 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 138223 NR_136343 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr8-1736 chr8 16826154 16826364 + 8.96 0.000 Intergenic Intergenic 176086 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr14-2119 chr14 74979576 74979786 + 8.96 0.000 Intergenic Intergenic -23240 NM_014239 8892 Hs.409137 NM_014239 ENSG00000119718 EIF2B2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B subunit beta protein-coding chrX-1692 chrX 12592942 12593152 + 8.96 0.000 intron (NM_001368400, intron 1 of 15) HAL1ME|LINE|L1 94367 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr1-9984 chr1 82867813 82868023 + 8.96 0.000 Intergenic Intergenic -35265 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr12-4360 chr12 3363205 3363415 + 8.96 0.000 intron (NR_148995, intron 1 of 11) intron (NR_148995, intron 1 of 11) 2812 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr14-2364 chr14 30808511 30808721 + 8.96 0.000 Intergenic L2a|LINE|L2 -65919 NM_001347720 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr18-3092 chr18 34529461 34529671 + 8.96 0.000 intron (NM_001198945, intron 1 of 10) L4_A_Mam|LINE|RTE-X 36254 NM_032979 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chrX-2607 chrX 107225758 107225968 + 8.96 0.000 intron (NM_173494, intron 5 of 6) intron (NM_173494, intron 5 of 6) 19231 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr1-8935 chr1 7870263 7870473 + 8.96 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -16877 NM_021995 10911 Hs.715862 NM_006786 ENSG00000049247 UTS2 PRO1068|U-II|UCN2|UII urotensin 2 protein-coding chr18-3496 chr18 73479680 73479890 + 8.96 0.000 Intergenic Intergenic 154844 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr11-4847 chr11 19952636 19952846 + 8.96 0.000 intron (NM_182964, intron 10 of 37) intron (NM_182964, intron 10 of 37) -69815 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr19-3901 chr19 41734829 41735039 + 8.96 0.000 Intergenic Intergenic -20596 NM_002483 4680 Hs.466814 NM_002483 ENSG00000086548 CEACAM6 CD66c|CEAL|NCA carcinoembryonic antigen related cell adhesion molecule 6 protein-coding chr12-5068 chr12 91774374 91774584 + 8.96 0.000 Intergenic Intergenic 367234 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr4-1548 chr4 184826125 184826335 + 8.96 0.000 promoter-TSS (NM_001286711) promoter-TSS (NM_001286711) -116 NM_001286711 2180 Hs.406678 NM_001995 ENSG00000151726 ACSL1 ACS1|FACL1|FACL2|LACS|LACS1|LACS2 acyl-CoA synthetase long chain family member 1 protein-coding chr11-6323 chr11 62199039 62199249 + 8.96 0.000 Intergenic AluSc|SINE|Alu 8928 NM_006552 10648 Hs.202686 NM_006552 ENSG00000168515 SCGB1D1 LIPA|LPHA|LPNA secretoglobin family 1D member 1 protein-coding chr1-8927 chr1 7469645 7469855 + 8.96 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -79996 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr15-4152 chr15 88865130 88865340 + 8.96 0.000 intron (NM_013227, intron 13 of 17) intron (NM_013227, intron 13 of 17) 30309 NM_001307952 145864 Hs.447530 NM_178232 ENSG00000140511 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding chr9-3505 chr9 22117532 22117742 + 8.96 0.000 intron (NR_003529, intron 16 of 18) intron (NR_003529, intron 16 of 18) -108324 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr18-3300 chr18 54365230 54365440 + 8.96 0.000 intron (NM_173529, intron 4 of 7) intron (NM_173529, intron 4 of 7) 7418 NR_110234 162681 Hs.208701 NM_173529 ENSG00000166845 C18orf54 LAS2 chromosome 18 open reading frame 54 protein-coding chr17-5722 chr17 57485607 57485817 + 8.96 0.000 intron (NM_001322250, intron 6 of 13) MER103C|DNA|hAT-Charlie 37885 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr7-5628 chr7 54336489 54336699 + 8.96 0.000 intron (NR_120516, intron 1 of 2) intron (NR_120516, intron 1 of 2) 5897 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr6-6800 chr6 5376619 5376829 + 8.96 0.000 intron (NM_006567, intron 2 of 6) intron (NM_006567, intron 2 of 6) 81351 NR_125846 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA chr20-3017 chr20 49687860 49688070 + 8.96 0.000 intron (NM_004776, intron 1 of 8) L1MEg1|LINE|L1 25913 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr9-4392 chr9 136696230 136696440 + 8.96 0.000 Intergenic Intergenic -8878 NM_001012727 10555 Hs.320151 NM_006412 ENSG00000169692 AGPAT2 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 protein-coding chr11-7528 chr11 11171834 11172044 + 8.96 0.000 Intergenic MIR|SINE|MIR 181311 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr1-5136 chr1 155034260 155034470 + 8.96 0.000 promoter-TSS (NM_144622) promoter-TSS (NM_144622) 559 NM_001143687 149095 Hs.567717 NM_152494 ENSG00000163357 DCST1 - DC-STAMP domain containing 1 protein-coding chr12-6629 chr12 209812 210022 + 8.96 0.000 exon (NM_001122847, exon 3 of 16) exon (NM_001122847, exon 3 of 16) 3785 NM_003044 6539 Hs.437174 NM_003044 ENSG00000111181 SLC6A12 BGT-1|BGT1|GAT2 solute carrier family 6 member 12 protein-coding chrX-1645 chrX 131144859 131145069 + 8.96 0.000 Intergenic L2c|LINE|L2 62529 NM_001330651 158763 Hs.22905 NM_144967 ENSG00000147256 ARHGAP36 - Rho GTPase activating protein 36 protein-coding chr16-4449 chr16 54673699 54673909 + 8.96 0.000 Intergenic Intergenic 174429 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr15-3097 chr15 64174377 64174587 + 8.96 0.000 intron (NM_022048, intron 11 of 11) intron (NM_022048, intron 11 of 11) -11327 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding chr5-7399 chr5 24753743 24753953 + 8.96 0.000 Intergenic L1P2|LINE|L1 86735 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA chr1-13234 chr1 216481865 216482075 + 8.96 0.000 Intergenic PRIMA41-int|LTR|ERV1 -58522 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr8-1740 chr8 19192459 19192669 + 8.96 0.000 intron (NR_038919, intron 3 of 4) intron (NR_038919, intron 3 of 4) 52958 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr12-5070 chr12 92036210 92036420 + 8.96 0.000 intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 105398 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr20-572 chr20 34476287 34476497 + 8.96 0.000 intron (NM_001257137, intron 17 of 25) intron (NM_001257137, intron 17 of 25) 10067 NR_030374 693229 NR_030374 ENSG00000207997 MIR644A MIR644|MIRN644|hsa-mir-644|hsa-mir-644a microRNA 644a ncRNA chr10-6724 chr10 126561572 126561782 + 8.96 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) -40184 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr7-3380 chr7 111559092 111559302 + 8.96 0.000 intron (NM_001350959, intron 2 of 7) intron (NM_001350959, intron 2 of 7) 3094 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr3-5701 chr3 14595573 14595783 + 8.96 0.000 Intergenic Intergenic -55336 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chr1-3508 chr1 156712300 156712510 + 8.96 0.000 Intergenic Intergenic -6589 NM_001199723 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding chrX-822 chrX 97617301 97617511 + 8.96 0.000 Intergenic Intergenic -52871 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr21-816 chr21 33103545 33103755 + 8.96 0.000 Intergenic AluJr|SINE|Alu 20050 NR_109961 101928107 Hs.382669 NR_109961 ENSG00000226527 LOC101928107 - uncharacterized LOC101928107 ncRNA chr11-4032 chr11 9823403 9823613 + 8.96 0.000 intron (NM_030962, intron 28 of 39) A-rich|Low_complexity|Low_complexity -15634 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr20-1768 chr20 51457308 51457518 + 8.96 0.000 intron (NM_012340, intron 5 of 10) intron (NM_012340, intron 5 of 10) -4436 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr8-3418 chr8 71193769 71193979 + 8.96 0.000 Intergenic Intergenic 162832 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr12-6370 chr12 63679269 63679479 + 8.96 0.000 Intergenic L3|LINE|CR1 -10881 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding chr14-2103 chr14 73633405 73633615 + 8.96 0.000 Intergenic Intergenic -11476 NM_001201366 83544 Hs.271270 NM_031427 ENSG00000119661 DNAL1 C14orf168|CILD16|LC1 dynein axonemal light chain 1 protein-coding chr2-9617 chr2 3582149 3582359 + 8.96 0.000 Intergenic Intergenic 6994 NM_001011 6201 Hs.534346 NM_001011 ENSG00000171863 RPS7 DBA8|S7|eS7 ribosomal protein S7 protein-coding chr19-2897 chr19 48550796 48551006 + 8.96 0.000 Intergenic AluSx1|SINE|Alu -1271 NM_177973 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr5-2902 chr5 122463238 122463448 + 8.96 0.000 intron (NR_051996, intron 2 of 5) intron (NR_051996, intron 2 of 5) 15744 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA chr15-2552 chr15 50183172 50183382 + 8.96 0.000 intron (NM_001159629, intron 1 of 8) intron (NM_001159629, intron 1 of 8) 1081 NM_003645 11001 Hs.11729 NM_003645 ENSG00000140284 SLC27A2 ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1 solute carrier family 27 member 2 protein-coding chr15-3825 chr15 77069829 77070039 + 8.96 0.000 intron (NM_198902, intron 1 of 5) intron (NM_198902, intron 1 of 5) 1175 NM_198902 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr7-6194 chr7 129850794 129851004 + 8.96 0.000 intron (NM_182697, intron 3 of 4) GA-rich|Low_complexity|Low_complexity -75885 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr2-13210 chr2 122206871 122207081 + 8.96 0.000 Intergenic Intergenic 451325 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr5-2893 chr5 111984245 111984455 + 8.96 0.000 intron (NR_046678, intron 3 of 3) intron (NR_046678, intron 3 of 3) -7418 NM_001142475 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr8-4614 chr8 131992311 131992521 + 8.96 0.000 intron (NM_001323558, intron 19 of 23) intron (NM_001323558, intron 19 of 23) 66966 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr17-7953 chr17 47629158 47629368 + 8.96 0.000 Intergenic MER3|DNA|hAT-Charlie -20656 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr14-1874 chr14 83415170 83415380 + 8.96 0.000 Intergenic Intergenic 772643 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr12-1879 chr12 55927862 55928072 + 8.96 0.000 promoter-TSS (NM_001143853) promoter-TSS (NM_001143853) -73 NM_032345 84305 Hs.505687 NM_032345 ENSG00000170473 PYM1 PYM|WIBG PYM homolog 1, exon junction complex associated factor protein-coding chr7-1279 chr7 1183148 1183358 + 8.96 0.000 Intergenic Intergenic 22468 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr5-8022 chr5 88567776 88567986 + 8.96 0.000 intron (NR_152235, intron 2 of 3) L2c|LINE|L2 99058 NR_030741 407047 NR_030741 ENSG00000284447 MIR9-2 MIRN9-2|hsa-mir-9-2|miRNA9-2|mir-9-2 microRNA 9-2 ncRNA chr2-13065 chr2 109715350 109715560 + 8.96 0.000 Intergenic MER21C|LTR|ERVL -77303 NM_032260 84220 Hs.469630 NM_005054 ENSG00000015568 RGPD5 BS-63|BS63|HEL161|RGP5 RANBP2 like and GRIP domain containing 5 protein-coding chr6-4932 chr6 99630283 99630493 + 8.96 0.000 Intergenic L1MC5a|LINE|L1 23614 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr16-3361 chr16 49938030 49938240 + 8.96 0.000 Intergenic Intergenic -80216 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr14-2215 chr14 102939812 102940022 + 8.96 0.000 exon (NM_006035, exon 33 of 37) exon (NM_006035, exon 33 of 37) 17261 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chrX-1291 chrX 115679479 115679689 + 8.96 0.000 Intergenic MER90|LTR|ERV1 86033 NM_001172335 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr9-2932 chr9 135596315 135596525 + 8.96 0.000 Intergenic MER72|LTR|ERV1 21495 NR_034017 100130954 Hs.550769 NR_034016 ENSG00000237339 LINC01502 - long intergenic non-protein coding RNA 1502 ncRNA chr2-14498 chr2 227220375 227220585 + 8.96 0.000 TTS (NR_102371) TTS (NR_102371) 55915 NM_000091 1285 Hs.570065 NM_000091 ENSG00000169031 COL4A3 ATS2|ATS3 collagen type IV alpha 3 chain protein-coding chr1-11196 chr1 242017687 242017897 + 8.96 0.000 Intergenic Intergenic -18694 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr3-7573 chr3 3655200 3655410 + 8.96 0.000 Intergenic Intergenic -144126 NM_001324189 57633 Hs.163244 NM_020873 ENSG00000175928 LRRN1 FIGLER3|NLRR-1 leucine rich repeat neuronal 1 protein-coding chr9-2151 chr9 122776116 122776326 + 8.96 0.000 Intergenic AluSx1|SINE|Alu -12712 NM_001001923 392391 Hs.534761 NM_001001923 ENSG00000148215 OR5C1 OR5C2P|OR9-31|OR9-F olfactory receptor family 5 subfamily C member 1 protein-coding chr15-3172 chr15 68885196 68885406 + 8.96 0.000 Intergenic Intergenic -45199 NR_033672 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr16-4145 chr16 4577720 4577930 + 8.96 0.000 intron (NM_001145011, intron 5 of 15) AluSz|SINE|Alu 21335 NM_001145011 342346 Hs.684212 NM_001145011 ENSG00000205832 C16orf96 - chromosome 16 open reading frame 96 protein-coding chr22-2123 chr22 33981041 33981251 + 8.96 0.000 Intergenic Intergenic -58258 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr11-8134 chr11 47513330 47513540 + 8.96 0.000 intron (NM_001330272, intron 1 of 15) intron (NM_001330272, intron 1 of 15) 10553 NM_001172639 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr11-4232 chr11 64395699 64395909 + 8.96 0.000 Intergenic Intergenic 27202 NR_031602 100302280 NR_031602 ENSG00000221273 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA chr12-2852 chr12 5310879 5311089 + 8.96 0.000 Intergenic LTR79|LTR|ERVL -67833 NR_120477 101929584 Hs.436529 NR_120476 ENSG00000256115 LINC02443 - long intergenic non-protein coding RNA 2443 ncRNA chrX-2080 chrX 21568692 21568902 + 8.96 0.000 intron (NM_001168648, intron 13 of 20) MIR|SINE|MIR 89533 NM_153270 257240 Hs.448572 NM_153270 ENSG00000185915 KLHL34 - kelch like family member 34 protein-coding chr22-1756 chr22 25071072 25071282 + 8.96 0.000 intron (NM_001145206, intron 4 of 10) intron (NM_001145206, intron 4 of 10) 41515 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr13-2923 chr13 114214321 114214531 + 8.96 0.000 Intergenic Intergenic -20419 NM_003903 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chr1-7156 chr1 206060139 206060349 + 8.96 0.000 intron (NM_001007544, intron 1 of 5) MIRc|SINE|MIR 7071 NM_001007544 440712 Hs.662248 NM_001007544 ENSG00000263961 RHEX C1orf186 regulator of hemoglobinization and erythroid cell expansion protein-coding chr20-4083 chr20 39358821 39359031 + 8.96 0.000 Intergenic LTR16C|LTR|ERVL -134178 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr9-2724 chr9 92325092 92325302 + 8.96 0.000 promoter-TSS (NM_001012267) promoter-TSS (NM_001012267) 153 NM_017948 55035 Hs.442199 NM_017948 ENSG00000198000 NOL8 C9orf34|NOP132|bA62C3.3|bA62C3.4 nucleolar protein 8 protein-coding chr11-5243 chr11 26820948 26821158 + 8.96 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -98993 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr8-4410 chr8 106874382 106874592 + 8.96 0.000 Intergenic L1MEd|LINE|L1 -104243 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr3-11254 chr3 197306238 197306448 + 8.96 0.000 Intergenic L1MB8|LINE|L1 -7022 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr14-4074 chr14 63987259 63987469 + 8.96 0.000 intron (NM_015180, intron 19 of 114) intron (NM_015180, intron 19 of 114) 107761 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA chr9-981 chr9 133113922 133114132 + 8.96 0.000 intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) 7213 NM_001271776 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr6-6217 chr6 17130984 17131194 + 8.96 0.000 3' UTR (NM_001190766, exon 5 of 5) 3' UTR (NM_001190766, exon 5 of 5) 28831 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr10-4845 chr10 14201758 14201968 + 8.96 0.000 intron (NR_134578, intron 2 of 3) AluSx3|SINE|Alu 127579 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr11-8923 chr11 17344033 17344243 + 8.96 0.000 Intergenic Intergenic -7662 NM_001202439 374383 Hs.146274 NM_001009913 ENSG00000188211 NCR3LG1 B7-H6|B7H6|DKFZp686O24166 natural killer cell cytotoxicity receptor 3 ligand 1 protein-coding chr11-7275 chr11 32531065 32531275 + 8.96 0.000 Intergenic AluY|SINE|Alu -52661 NM_001307929 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr8-3503 chr8 108722563 108722773 + 8.96 0.000 intron (NR_136411, intron 1 of 3) MIRb|SINE|MIR 64926 NM_153015 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr9-3544 chr9 37046341 37046551 + 8.96 0.000 Intergenic Intergenic -12178 NR_104000 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr22-2743 chr22 39668306 39668516 + 8.96 0.000 intron (NM_001003406, intron 23 of 35) intron (NM_001003406, intron 23 of 35) 97658 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr8-4448 chr8 113950990 113951200 + 8.96 0.000 Intergenic L1MD1|LINE|L1 -514156 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr12-8152 chr12 121112413 121112623 + 8.96 0.000 Intergenic AluSx|SINE|Alu -20358 NR_033956 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr12-5278 chr12 110384141 110384351 + 8.96 0.000 intron (NM_001137664, intron 6 of 9) AluJb|SINE|Alu 19484 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr20-1126 chr20 32456933 32457143 + 8.96 0.000 intron (NM_001351680, intron 2 of 8) intron (NM_001351680, intron 2 of 8) 26452 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr22-2604 chr22 31327132 31327342 + 8.96 0.000 exon (NM_014323, exon 5 of 5) exon (NM_014323, exon 5 of 5) -8112 NR_110542 101929760 Hs.661718 NR_110542 ENSG00000228839 PIK3IP1-AS1 - PIK3IP1 antisense RNA 1 (head to head) ncRNA chr7-8834 chr7 85913924 85914134 + 8.96 0.000 Intergenic Intergenic 492907 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr6-6549 chr6 132990125 132990335 + 8.96 0.000 Intergenic Intergenic -97850 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr10-8770 chr10 104559306 104559516 + 8.96 0.000 Intergenic MIRb|SINE|MIR -79136 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr11-6479 chr11 67812021 67812231 + 8.96 0.000 Intergenic Intergenic -6790 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr19-5832 chr19 41686254 41686464 + 8.96 0.000 intron (NM_006890, intron 2 of 4) intron (NM_006890, intron 2 of 4) 1911 NM_001291485 1087 Hs.74466 NM_006890 ENSG00000007306 CEACAM7 CGM2 carcinoembryonic antigen related cell adhesion molecule 7 protein-coding chr7-2382 chr7 39488901 39489111 + 8.96 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -77398 NM_001282446 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr18-1608 chr18 44826424 44826634 + 8.96 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 143637 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr20-2095 chr20 23489307 23489517 + 8.96 0.000 Intergenic L1ME3Cz|LINE|L1 -1705 NM_005492 10047 Hs.121602 NM_005492 ENSG00000125815 CST8 CRES|CTES5 cystatin 8 protein-coding chr4-2020 chr4 2743687 2743897 + 8.96 0.000 intron (NM_001292016, intron 4 of 4) intron (NM_001292016, intron 4 of 4) 12544 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr17-3227 chr17 13541071 13541281 + 8.96 0.000 intron (NM_006042, intron 1 of 1) intron (NM_006042, intron 1 of 1) 2470 NR_031679 100302287 NR_031679 ENSG00000221698 MIR548H3 MIR548H-3|MIRN548H3|hsa-mir-548h-3 microRNA 548h-3 ncRNA chr22-4104 chr22 43630374 43630584 + 8.96 0.000 intron (NM_198856, intron 17 of 29) intron (NM_198856, intron 17 of 29) 114225 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr20-2143 chr20 36627264 36627474 + 8.96 0.000 intron (NM_175077, intron 5 of 7) intron (NM_175077, intron 5 of 7) 18827 NM_032214 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr19-5705 chr19 13247917 13248127 + 8.96 0.000 intron (NM_023035, intron 30 of 46) LTR16C|LTR|ERVL 97611 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr4-3850 chr4 127332608 127332818 + 8.96 0.000 Intergenic Intergenic -300244 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr6-7872 chr6 106921758 106921968 + 8.96 0.000 Intergenic Intergenic 52176 NM_001291739 100133941 Hs.644105 NM_013230 ENSG00000272398 CD24 CD24A CD24 molecule protein-coding chr20-2865 chr20 62518252 62518462 + 8.96 0.000 Intergenic Intergenic -32096 NM_178463 128826 Hs.86507 NM_178463 MIR1-1HG C20orf166|MIR133A2HG MIR1-1 host gene protein-coding chr12-3077 chr12 11601593 11601803 + 8.96 0.000 Intergenic Intergenic -48156 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chrX-1651 chrX 136468822 136469032 + 8.96 0.000 Intergenic Intergenic -19020 NM_001727 680 Hs.121484 NM_001727 ENSG00000102239 BRS3 BB3|BB3R|BBR3 bombesin receptor subtype 3 protein-coding chr10-9146 chr10 128080680 128080890 + 8.96 0.000 intron (NM_001323354, intron 19 of 19) intron (NM_001323354, intron 19 of 19) -18360 NR_136150 105378553 NR_136149 AS-PTPRE - lncRNA antisense to PTPRE protein-coding gene ncRNA chr6-4619 chr6 46380006 46380216 + 8.96 0.000 intron (NM_001251973, intron 2 of 4) MER46C|DNA|TcMar-Tigger -54219 NM_005822 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr11-6143 chr11 41376834 41377044 + 8.96 0.000 intron (NM_001258419, intron 1 of 6) intron (NM_001258419, intron 1 of 6) 82697 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr16-3337 chr16 3713302 3713512 + 8.96 0.000 intron (NM_016292, intron 1 of 17) intron (NM_016292, intron 1 of 17) 4117 NM_016292 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr4-5381 chr4 189034171 189034381 + 8.96 0.000 Intergenic Intergenic 257619 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr12-3013 chr12 124624662 124624872 + 8.96 0.000 Intergenic Intergenic -57155 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr19-3483 chr19 36969592 36969802 + 8.96 0.000 intron (NM_001204839, intron 5 of 8) MLT1D|LTR|ERVL-MaLR 53365 NM_198539 374900 Hs.404220 NM_198539 ENSG00000198453 ZNF568 ZFP568 zinc finger protein 568 protein-coding chr1-6356 chr1 7661315 7661525 + 8.96 0.000 intron (NM_001349608, intron 6 of 21) intron (NM_001349608, intron 6 of 21) -8310 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr6-4719 chr6 62834114 62834324 + 8.96 0.000 Intergenic Intergenic 485758 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chrX-4633 chrX 78123188 78123398 + 8.96 0.000 exon (NM_000291, exon 8 of 11) exon (NM_000291, exon 8 of 11) 16357 NM_015975 51616 Hs.592248 NM_015975 ENSG00000187325 TAF9B DN-7|DN7|TAF9L|TAFII31L|TFIID-31 TATA-box binding protein associated factor 9b protein-coding chr1-5883 chr1 3569331 3569541 + 8.96 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) -8646 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr12-7452 chr12 62999976 63000186 + 8.96 0.000 Intergenic Intergenic -64931 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr2-8212 chr2 95486805 95487015 + 8.96 0.000 Intergenic AluSz6|SINE|Alu -2179 NM_001164464 653192 Hs.723811 NM_001164464 ENSG00000144010 TRIM43B - tripartite motif containing 43B protein-coding chr11-8705 chr11 6152900 6153110 + 8.96 0.000 Intergenic L2b|LINE|L2 17321 NM_001004052 255725 Hs.690457 NM_001004052 ENSG00000255307 OR52B2 OR11-70 olfactory receptor family 52 subfamily B member 2 protein-coding chr7-7460 chr7 90054956 90055166 + 8.96 0.000 intron (NR_110029, intron 2 of 2) MLT1B|LTR|ERVL-MaLR -64339 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr16-4119 chr16 3095993 3096203 + 8.96 0.000 intron (NM_001365272, intron 1 of 4) intron (NM_001365272, intron 1 of 4) 3196 NM_001365272 84891 Hs.334515 NM_032805 ENSG00000130182 ZSCAN10 ZFP206|ZNF206 zinc finger and SCAN domain containing 10 protein-coding chr9-8610 chr9 128497909 128498119 + 8.96 0.000 intron (NM_001351583, intron 18 of 20) MIR|SINE|MIR -6678 NM_001003722 2733 Hs.522418 NM_001499 ENSG00000119392 GLE1 CAAHC|CAAHD|GLE1L|LCCS|LCCS1|hGLE1 GLE1 RNA export mediator protein-coding chr22-3296 chr22 50139960 50140170 + 8.96 0.000 intron (NM_018995, intron 15 of 26) L1ME1|LINE|L1 -6990 NM_001164106 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chrX-1999 chrX 13747944 13748154 + 8.96 0.000 intron (NM_001330210, intron 9 of 23) intron (NM_001330210, intron 9 of 23) 13301 NM_003611 8481 Hs.6483 NM_003611 ENSG00000046651 OFD1 71-7A|CXorf5|JBTS10|RP23|SGBS2 OFD1 centriole and centriolar satellite protein protein-coding chr10-2983 chr10 77437036 77437246 + 8.96 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 86269 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr8-6127 chr8 29067602 29067812 + 8.96 0.000 3' UTR (NM_015254, exon 40 of 40) 3' UTR (NM_015254, exon 40 of 40) 176393 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr19-4998 chr19 47038924 47039134 + 8.96 0.000 intron (NM_001321086, intron 2 of 7) intron (NM_001321086, intron 2 of 7) 3712 NM_001321086 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr1-6967 chr1 160419113 160419323 + 8.96 0.000 exon (NM_020335, exon 4 of 8) exon (NM_020335, exon 4 of 8) 18654 NM_020335 57216 Hs.99477 NM_020335 ENSG00000162738 VANGL2 LPP1|LTAP|STB1|STBM|STBM1 VANGL planar cell polarity protein 2 protein-coding chr11-6339 chr11 62983843 62984053 + 8.96 0.000 exon (NM_004790, exon 2 of 10) exon (NM_004790, exon 2 of 10) 1019 NM_153277 9356 Hs.369252 NM_004790 ENSG00000197901 SLC22A6 HOAT1|OAT1|PAHT|ROAT1 solute carrier family 22 member 6 protein-coding chr3-10809 chr3 161377531 161377741 + 8.96 0.000 Intergenic Intergenic -4686 NM_001320679 165679 Hs.369104 NM_145035 ENSG00000196542 SPTSSB ADMP|C3orf57|SSSPTB serine palmitoyltransferase small subunit B protein-coding chr7-3429 chr7 152682052 152682262 + 8.96 0.000 Intergenic FLAM_C|SINE|Alu -6016 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr4-5145 chr4 153620486 153620696 + 8.96 0.000 intron (NM_001131007, intron 26 of 34) intron (NM_001131007, intron 26 of 34) -19577 NR_134873 100419170 Hs.382102 NR_134873 ENSG00000250771 LOC100419170 - toll like receptor 2 pseudogene pseudo chr5-2367 chr5 80755789 80755999 + 8.96 0.000 intron (NM_002439, intron 12 of 23) L1MEd|LINE|L1 -100911 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr14-3416 chr14 96040238 96040448 + 8.96 0.000 exon (NM_001289139, exon 2 of 3) exon (NM_001289139, exon 2 of 3) 981 NM_001282463 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr1-10484 chr1 164380197 164380407 + 8.96 0.000 Intergenic L2|LINE|L2 -179058 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chrX-1451 chrX 83160835 83161045 + 8.96 0.000 Intergenic Intergenic -347350 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr5-6292 chr5 115859552 115859762 + 8.96 0.000 intron (NM_001002924, intron 2 of 6) MLT1J1|LTR|ERVL-MaLR 17170 NR_157087 1176 Hs.406191 NM_001284 ENSG00000177879 AP3S1 CLAPS3|Sigma3A adaptor related protein complex 3 subunit sigma 1 protein-coding chr8-4638 chr8 133874181 133874391 + 8.96 0.000 Intergenic Intergenic -12210 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr15-1500 chr15 47331861 47332071 + 8.96 0.000 intron (NM_001198999, intron 1 of 19) intron (NM_001198999, intron 1 of 19) 147877 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr6-5907 chr6 47376088 47376298 + 8.96 0.000 Intergenic Intergenic -66288 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr19-4230 chr19 49012443 49012653 + 8.96 0.000 intron (NM_006666, intron 11 of 14) Tigger17a|DNA|TcMar-Tigger 2642 NR_106856 102466738 NR_106856 ENSG00000273898 MIR6798 hsa-mir-6798 microRNA 6798 ncRNA chr2-13771 chr2 171413048 171413258 + 8.96 0.000 intron (NM_024770, intron 1 of 9) Charlie1a|DNA|hAT-Charlie 20837 NM_001321154 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr8-4163 chr8 78333111 78333321 + 8.96 0.000 Intergenic Intergenic -183124 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr9-3669 chr9 97594583 97594793 + 8.96 0.000 intron (NM_001166116, intron 9 of 9) intron (NM_001166116, intron 9 of 9) 38680 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr5-4349 chr5 167936420 167936630 + 8.96 0.000 intron (NM_001368145, intron 2 of 26) intron (NM_001368145, intron 2 of 26) 181596 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr8-4649 chr8 134960018 134960228 + 8.96 0.000 Intergenic Intergenic 110188 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr2-5851 chr2 238101585 238101795 + 8.96 0.000 intron (NM_194312, intron 1 of 8) intron (NM_194312, intron 1 of 8) 1350 NM_194312 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chrX-4875 chrX 106331553 106331763 + 8.96 0.000 Intergenic MER74B|LTR|ERVL 163353 NM_152423 139221 Hs.592221 NM_152423 ENSG00000157502 PWWP3B MUM1L1 PWWP domain containing 3B protein-coding chr10-4668 chr10 127481955 127482165 + 8.96 0.000 Intergenic Intergenic -67289 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr20-2417 chr20 22438983 22439193 + 8.96 0.000 Intergenic LTR16C|LTR|ERVL -18445 NR_027090 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr3-5434 chr3 172390852 172391062 + 8.96 0.000 intron (NM_001135095, intron 25 of 25) intron (NM_001135095, intron 25 of 25) 57499 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr1-14086 chr1 30269223 30269433 + 8.96 0.000 Intergenic L2b|LINE|L2 -231716 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr6-3802 chr6 27247194 27247404 + 8.96 0.000 promoter-TSS (NM_005865) promoter-TSS (NM_005865) -402 NM_005865 10279 Hs.274407 NM_005865 ENSG00000112812 PRSS16 TSSP serine protease 16 protein-coding chr22-2321 chr22 39463868 39464078 + 8.96 0.000 intron (NM_002409, intron 1 of 1) intron (NM_002409, intron 1 of 1) 6961 NM_002409 4248 Hs.276808 NM_002409 ENSG00000128268 MGAT3 GNT-III|GNT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase protein-coding chr5-5789 chr5 174799217 174799427 + 8.96 0.000 Intergenic Intergenic 47588 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr1-10129 chr1 102132781 102132991 + 8.96 0.000 Intergenic L1PA10|LINE|L1 -135652 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr11-7350 chr11 66835811 66836021 + 8.96 0.000 intron (NM_001302084, intron 12 of 14) L1MB7|LINE|L1 -7525 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr17-2898 chr17 41444332 41444542 + 8.96 0.000 Intergenic L2b|LINE|L2 -3093 NM_006771 8687 Hs.248188 NM_006771 ENSG00000171360 KRT38 HA8|KRTHA8|hHa8 keratin 38 protein-coding chr19-4632 chr19 14673540 14673750 + 8.96 0.000 intron (NM_032571, intron 1 of 15) MIR|SINE|MIR 1199 NM_001289159 84658 Hs.658712 NM_032571 ENSG00000131355 ADGRE3 EMR3 adhesion G protein-coupled receptor E3 protein-coding chr17-8358 chr17 74169956 74170166 + 8.96 0.000 Intergenic AluSx1|SINE|Alu -33617 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr16-6589 chr16 66932555 66932765 + 8.96 0.000 intron (NR_046109, intron 4 of 4) intron (NR_046109, intron 4 of 4) 1742 NM_016062 51647 Hs.9825 NM_016062 ENSG00000166595 CIAO2B CGI-128|CIA2B|FAM96B|MIP18 cytosolic iron-sulfur assembly component 2B protein-coding chr2-7560 chr2 24209066 24209276 + 8.96 0.000 exon (NM_019595, exon 35 of 39) exon (NM_019595, exon 35 of 39) 34118 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr9-8261 chr9 111964964 111965174 + 8.96 0.000 Intergenic L3|LINE|CR1 32969 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr12-5088 chr12 94209954 94210164 + 8.96 0.000 intron (NM_005761, intron 5 of 30) intron (NM_005761, intron 5 of 30) -52462 NR_037687 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr2-5308 chr2 72694959 72695169 + 8.96 0.000 intron (NR_135774, intron 6 of 19) intron (NR_135774, intron 6 of 19) 130969 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr4-4043 chr4 2922645 2922855 + 8.96 0.000 intron (NM_014190, intron 13 of 15) L1PA7|LINE|L1 11487 NM_001120 10227 Hs.632581 NM_001120 ENSG00000109736 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding chr2-11318 chr2 198222383 198222593 + 8.96 0.000 Intergenic Intergenic 152609 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr16-3242 chr16 86298108 86298318 + 8.96 0.000 Intergenic Intergenic 11782 NR_038438 146513 Hs.434338 NR_038438 ENSG00000268532 LINC02135 - long intergenic non-protein coding RNA 2135 ncRNA chr2-13670 chr2 163002956 163003166 + 8.96 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -164294 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr11-10128 chr11 88603902 88604112 + 8.96 0.000 intron (NM_001143831, intron 4 of 8) intron (NM_001143831, intron 4 of 8) 99431 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr2-6559 chr2 218875320 218875530 + 8.96 0.000 Intergenic AluY|SINE|Alu -5427 NM_025216 80326 Hs.121540 NM_025216 ENSG00000135925 WNT10A OODD|SSPS|STHAG4 Wnt family member 10A protein-coding chr10-4327 chr10 25113115 25113325 + 8.96 0.000 non-coding (NR_120649, exon 1 of 8) non-coding (NR_120649, exon 1 of 8) 162 NR_120649 101929025 Hs.553324 NR_120649 ENSG00000231422 LINC01516 - long intergenic non-protein coding RNA 1516 ncRNA chr16-3668 chr16 89165197 89165407 + 8.96 0.000 Intergenic Intergenic -1081 NR_046200 400558 Hs.513818 NR_046200 ENSG00000205015 LINC02138 - long intergenic non-protein coding RNA 2138 ncRNA chr13-1660 chr13 73221566 73221776 + 8.96 0.000 Intergenic L2b|LINE|L2 162666 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr8-1686 chr8 57564313 57564523 + 8.96 0.000 Intergenic Intergenic -181731 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr16-6341 chr16 50099845 50100055 + 8.96 0.000 intron (NR_138092, intron 13 of 15) intron (NR_138092, intron 13 of 15) 33980 NM_001329729 55027 Hs.733027 NM_017939 ENSG00000155393 HEATR3 SYO1 HEAT repeat containing 3 protein-coding chr5-5476 chr5 139739721 139739931 + 8.96 0.000 Intergenic MIRb|SINE|MIR 6397 NR_105053 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr10-5205 chr10 61220687 61220897 + 8.96 0.000 Intergenic L1MC2|LINE|L1 204517 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr11-5800 chr11 6079311 6079521 + 8.96 0.000 Intergenic Intergenic -28268 NM_001005181 196335 Hs.632154 NM_001005181 ENSG00000180919 OR56B4 OR11-67 olfactory receptor family 56 subfamily B member 4 protein-coding chr11-9867 chr11 73532429 73532639 + 8.96 0.000 intron (NM_001286051, intron 1 of 5) intron (NM_001286051, intron 1 of 5) 65578 NM_015159 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr15-2101 chr15 67068916 67069126 + 8.96 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) 3419 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr4-6438 chr4 136318146 136318356 + 8.96 0.000 Intergenic Intergenic -404571 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr7-8945 chr7 97315015 97315225 + 8.96 0.000 Intergenic MER21C|LTR|ERVL 198527 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr16-4469 chr16 56475989 56476199 + 8.96 0.000 exon (NM_018233, exon 13 of 13) exon (NM_018233, exon 13 of 13) 24010 NM_001324358 55239 Hs.231883 NM_018233 ENSG00000087263 OGFOD1 TPA1 2-oxoglutarate and iron dependent oxygenase domain containing 1 protein-coding chr2-6589 chr2 231693205 231693415 + 8.96 0.000 Intergenic Intergenic -15215 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr14-2925 chr14 41445078 41445288 + 8.96 0.000 Intergenic Intergenic -161673 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr6-7177 chr6 37872039 37872249 + 8.96 0.000 intron (NM_021943, intron 1 of 5) L1MEb|LINE|L1 52417 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr4-5761 chr4 62240588 62240798 + 8.96 0.000 Intergenic L1PA7|LINE|L1 -78928 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr22-985 chr22 36977923 36978133 + 8.96 0.000 Intergenic (AAAG)n|Simple_repeat|Simple_repeat 12780 NR_038954 100506241 Hs.640023 NR_038954 ENSG00000215403 LL22NC01-81G9.3 - uncharacterized protein FLJ39582-like ncRNA chr18-3033 chr18 27345520 27345730 + 8.96 0.000 Intergenic Intergenic -2969 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr3-8866 chr3 10295868 10296078 + 8.96 0.000 Intergenic AluJb|SINE|Alu -3026 NM_001302824 51738 Hs.590080 NM_016362 ENSG00000157017 GHRL MTLRP ghrelin and obestatin prepropeptide protein-coding chr16-4736 chr16 84410920 84411130 + 8.96 0.000 intron (NM_014861, intron 6 of 26) intron (NM_014861, intron 6 of 26) 4437 NM_001291454 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr5-6465 chr5 172086574 172086784 + 8.96 0.000 intron (NM_005990, intron 10 of 18) intron (NM_005990, intron 10 of 18) -79806 NM_012300 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr9-6643 chr9 133164177 133164387 + 8.96 0.000 promoter-TSS (NM_001288573) promoter-TSS (NM_001288573) -368 NM_021996 26301 Hs.495419 NM_021996 ENSG00000148288 GBGT1 A3GALNT|FS|UNQ2513 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) protein-coding chr7-2651 chr7 2829231 2829441 + 8.96 0.000 intron (NM_001293092, intron 1 of 2) intron (NM_001293092, intron 1 of 2) -14106 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr1-15148 chr1 104842344 104842554 + 8.96 0.000 Intergenic Intergenic 769426 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo chr8-3982 chr8 52825484 52825694 + 8.96 0.000 Intergenic Intergenic -111123 NM_001083617 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr1-14325 chr1 39807343 39807553 + 8.96 0.000 Intergenic AluJb|SINE|Alu 18472 NR_135805 101929536 Hs.552820 NR_135805 ENSG00000261798 LOC101929536 - uncharacterized LOC101929536 ncRNA chr7-4684 chr7 40996172 40996382 + 8.96 0.000 Intergenic Intergenic -16338 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr14-1903 chr14 102827651 102827861 + 8.96 0.000 intron (NM_001199427, intron 1 of 7) intron (NM_001199427, intron 1 of 7) 50277 NM_145726 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr8-2820 chr8 127307866 127308076 + 8.96 0.000 intron (NR_117100, intron 5 of 5) intron (NR_117100, intron 5 of 5) 63334 NR_117099 103021164 Hs.571531 NR_117099 CASC21 CARLO2|CARLo-2|LINC01244 cancer susceptibility 21 ncRNA chr10-4130 chr10 75931700 75931910 + 8.96 0.000 intron (NR_131178, intron 3 of 7) MamGypsy2-I|LTR|Gypsy 149044 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr16-4668 chr16 77234815 77235025 + 8.96 0.000 Intergenic MSTA|LTR|ERVL-MaLR 35512 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding chr17-8636 chr17 81493027 81493237 + 8.96 0.000 Intergenic Intergenic 19667 NM_001614 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr7-9069 chr7 104427981 104428191 + 8.96 0.000 intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 99430 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr17-7980 chr17 48365541 48365751 + 8.96 0.000 intron (NM_001075099, intron 2 of 12) L2|LINE|L2 64568 NM_003726 8631 Hs.316931 NM_003726 ENSG00000141293 SKAP1 HEL-S-81p|SCAP1|SKAP55 src kinase associated phosphoprotein 1 protein-coding chr5-800 chr5 55600924 55601134 + 8.96 0.000 Intergenic Intergenic -65951 NM_176895 8611 Hs.696231 NM_003711 ENSG00000067113 PLPP1 LLP1a|LPP1|PAP-2a|PAP2|PPAP2A phospholipid phosphatase 1 protein-coding chr14-2700 chr14 84819862 84820072 + 8.96 0.000 Intergenic L1ME3A|LINE|L1 -451965 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr17-3309 chr17 62877052 62877262 + 8.96 0.000 Intergenic Intergenic -67058 NR_030363 693218 NR_030363 ENSG00000207552 MIR633 MIRN633|hsa-mir-633 microRNA 633 ncRNA chr6-1342 chr6 36287768 36287978 + 8.96 0.000 intron (NM_001145717, intron 1 of 7) Tigger19b|DNA|TcMar-Tigger 17413 NM_001145717 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr6-5480 chr6 161632199 161632409 + 8.96 0.000 intron (NM_004562, intron 7 of 11) intron (NM_004562, intron 7 of 11) 161327 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr16-6433 chr16 56563214 56563424 + 8.96 0.000 Intergenic L2c|LINE|L2 -1754 NM_032935 84560 Hs.567624 NM_032935 ENSG00000102891 MT4 MT-4|MT-IV|MTIV metallothionein 4 protein-coding chrX-1667 chrX 153639209 153639419 + 8.96 0.000 Intergenic Intergenic -3127 NM_001395 1852 Hs.144879 NM_001395 ENSG00000130829 DUSP9 MKP-4|MKP4 dual specificity phosphatase 9 protein-coding chr19-3715 chr19 40922749 40922959 + 8.96 0.000 Intergenic LTR5B|LTR|ERVK -1411 NR_001278 1556 Hs.529117 NR_001278 ENSG00000256612 CYP2B7P CYP2B|CYP2B7|CYP2B7P1 cytochrome P450 family 2 subfamily B member 7, pseudogene pseudo chr1-14745 chr1 67302745 67302955 + 8.96 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR -4514 NM_001258216 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr5-5143 chr5 105857188 105857398 + 8.96 0.000 Intergenic L1MA10|LINE|L1 757819 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr8-7025 chr8 110567763 110567973 + 8.96 0.000 Intergenic Intergenic 459565 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr2-6757 chr2 40642368 40642578 + 8.96 0.000 Intergenic Intergenic -130038 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr16-4686 chr16 79776579 79776789 + 8.96 0.000 intron (NR_104660, intron 1 of 3) intron (NR_104660, intron 1 of 3) -6152 NR_104663 102467146 Hs.657587 NR_104663 ENSG00000261390 MAFTRR linc-MAF-4|lincMAF4 MAF transcriptional regulator RNA ncRNA chr16-2215 chr16 87101988 87102198 + 8.96 0.000 Intergenic Intergenic 44309 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr3-3498 chr3 11548991 11549201 + 8.96 0.000 intron (NM_001349238, intron 17 of 17) L1ME1|LINE|L1 19702 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr11-6195 chr11 45660314 45660524 + 8.96 0.000 intron (NM_003654, intron 1 of 3) intron (NM_003654, intron 1 of 3) 5203 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr2-14043 chr2 194937698 194937908 + 8.96 0.000 Intergenic L1MC3|LINE|L1 207208 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr10-8550 chr10 93612554 93612764 + 8.96 0.000 5' UTR (NM_006204, exon 1 of 22) 5' UTR (NM_006204, exon 1 of 22) 122 NM_006204 5146 Hs.658121 NM_006204 ENSG00000095464 PDE6C ACHM5|COD4|PDEA2 phosphodiesterase 6C protein-coding chr12-5363 chr12 119003618 119003828 + 8.96 0.000 intron (NM_194286, intron 1 of 12) intron (NM_194286, intron 1 of 12) 22182 NM_194286 84530 Hs.744964 NM_194286 ENSG00000139767 SRRM4 KIAA1853|MU-MB-2.76|nSR100 serine/arginine repetitive matrix 4 protein-coding chr9-5785 chr9 128166881 128167091 + 8.96 0.000 intron (NM_001131016, intron 15 of 16) intron (NM_001131016, intron 15 of 16) 6721 NM_024112 79095 Hs.522412 NM_024112 ENSG00000171159 C9orf16 EST00098 chromosome 9 open reading frame 16 protein-coding chr6-2754 chr6 112802210 112802420 + 8.96 0.000 Intergenic Intergenic 454985 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr15-2233 chr15 98187217 98187427 + 8.96 0.000 Intergenic MER63A|DNA|hAT-Blackjack -98569 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chr1-3801 chr1 15584494 15584704 + 8.96 0.000 intron (NM_024758, intron 1 of 6) CpG 452 NM_024758 79814 Hs.461532 NM_024758 ENSG00000116771 AGMAT - agmatinase protein-coding chr13-2205 chr13 21529398 21529608 + 8.96 0.000 intron (NM_152726, intron 4 of 11) L2c|LINE|L2 -70133 NM_001286638 253832 Hs.564611 NM_153251 ENSG00000180776 ZDHHC20 4933421L13Rik|DHHC-20|DHHC20 zinc finger DHHC-type containing 20 protein-coding chr10-4103 chr10 67976745 67976955 + 8.96 0.000 intron (NM_001278185, intron 15 of 23) L1MA2|LINE|L1 34033 NR_131184 100009667 NR_131184 POU5F1P5 Oct4-pg5 POU class 5 homeobox 1 pseudogene 5 pseudo chr2-4004 chr2 96022312 96022522 + 8.96 0.000 intron (NM_207328, intron 21 of 21) intron (NM_207328, intron 21 of 21) 11866 NR_003698 729234 Hs.720108 NR_003698 ENSG00000231584 FAHD2CP - fumarylacetoacetate hydrolase domain containing 2C, pseudogene pseudo chr12-7829 chr12 100675358 100675568 + 8.96 0.000 Intergenic Intergenic 81845 NM_001303131 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr11-2998 chr11 119368969 119369179 + 8.96 0.000 intron (NM_001243759, intron 1 of 11) intron (NM_001243759, intron 1 of 11) -4866 NM_171997 9099 Hs.524085 NM_004205 ENSG00000036672 USP2 UBP41|USP9 ubiquitin specific peptidase 2 protein-coding chr18-946 chr18 9709124 9709334 + 8.96 0.000 intron (NM_006868, intron 1 of 6) CpG 928 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr19-2946 chr19 5539400 5539610 + 8.96 0.000 Intergenic Intergenic 28529 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr5-8204 chr5 107281999 107282209 + 8.96 0.000 Intergenic Intergenic -271090 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr6-4385 chr6 23741616 23741826 + 8.96 0.000 Intergenic ERVL-B4-int|LTR|ERVL -384494 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr10-5761 chr10 103436456 103436666 + 8.96 0.000 intron (NM_014976, intron 25 of 35) intron (NM_014976, intron 25 of 35) 15809 NR_046344 51063 Hs.241545 NM_015916 ENSG00000138172 CALHM2 FAM26B calcium homeostasis modulator family member 2 protein-coding chrX-2071 chrX 19904868 19905078 + 8.96 0.000 Intergenic Intergenic -17373 NM_001353891 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr2-7700 chr2 31815195 31815405 + 8.96 0.000 Intergenic Intergenic -11320 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA chr1-6935 chr1 154757662 154757872 + 8.96 0.000 intron (NM_001204087, intron 3 of 8) L3|LINE|CR1 102109 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr9-3496 chr9 17292075 17292285 + 8.96 0.000 intron (NM_001365029, intron 6 of 25) L1PA10|LINE|L1 157140 NM_017738 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr12-3596 chr12 51242992 51243202 + 8.96 0.000 3' UTR (NM_014764, exon 4 of 4) 3' UTR (NM_014764, exon 4 of 4) 4271 NM_001136268 9802 Hs.369761 NM_014764 ENSG00000183283 DAZAP2 PRTB DAZ associated protein 2 protein-coding chr7-5275 chr7 22386835 22387045 + 8.96 0.000 Intergenic Intergenic -29786 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr5-6553 chr5 14655044 14655254 + 8.96 0.000 Intergenic MER33|DNA|hAT-Charlie -2767 NR_132981 106635684 NR_132981 SNORD141B - small nucleolar RNA, C/D box 141B snoRNA chr4-3354 chr4 6177551 6177761 + 8.96 0.000 intron (NM_144720, intron 1 of 12) intron (NM_144720, intron 1 of 12) 16963 NM_001306134 152789 Hs.479066 NM_144720 ENSG00000152969 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding chrX-1199 chrX 69806507 69806717 + 8.96 0.000 intron (NM_001005613, intron 2 of 2) L2b|LINE|L2 190499 NM_001005612 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr9-7785 chr9 78473120 78473330 + 8.96 0.000 Intergenic Intergenic 176100 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr6-7656 chr6 83663784 83663994 + 8.96 0.000 intron (NM_001256718, intron 2 of 27) Tigger1|DNA|TcMar-Tigger 44670 NM_001363677 9892 Hs.368046 NM_014841 ENSG00000065609 SNAP91 AP180|CALM synaptosome associated protein 91 protein-coding chr5-5145 chr5 106565938 106566148 + 8.96 0.000 Intergenic Intergenic 444971 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr17-6530 chr17 34866132 34866342 + 8.96 0.000 Intergenic MIRb|SINE|MIR 95223 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr9-5629 chr9 119877718 119877928 + 8.96 0.000 Intergenic MIRb|SINE|MIR -57237 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr3-6565 chr3 122485095 122485305 + 8.96 0.000 intron (NR_026698, intron 2 of 14) AluJo|SINE|Alu 29739 NR_026698 3836 Hs.161008 NM_002264 ENSG00000114030 KPNA1 IPOA5|NPI-1|RCH2|SRP1 karyopherin subunit alpha 1 protein-coding chr8-2736 chr8 102742781 102742991 + 8.96 0.000 Intergenic L2a|LINE|L2 -63936 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr6-3610 chr6 105179662 105179872 + 8.96 0.000 intron (NM_022361, intron 1 of 3) CpG 247 NM_022361 64208 Hs.458336 NM_022361 ENSG00000132429 POPDC3 POP3|bA355M14.1 popeye domain containing 3 protein-coding chr9-4998 chr9 22119558 22119768 + 8.96 0.000 intron (NR_003529, intron 17 of 18) intron (NR_003529, intron 17 of 18) -110350 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr3-6232 chr3 66441248 66441458 + 8.96 0.000 intron (NM_015541, intron 3 of 18) intron (NM_015541, intron 3 of 18) 59068 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr7-4098 chr7 37193541 37193751 + 8.96 0.000 intron (NM_001206480, intron 13 of 21) intron (NM_001206480, intron 13 of 21) 160022 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr2-2926 chr2 937563 937773 + 8.96 0.000 Intergenic MLT1E1|LTR|ERVL-MaLR -13181 NM_018968 54221 Hs.595069 NM_018968 ENSG00000172554 SNTG2 G2SYN|SYN5 syntrophin gamma 2 protein-coding chr12-5651 chr12 76915926 76916136 + 8.96 0.000 Intergenic Intergenic -37012 NM_001321 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr3-3856 chr3 36866500 36866710 + 8.96 0.000 intron (NM_001329998, intron 9 of 23) LTR16A2|LTR|ERVL -44105 NR_147141 105377031 Hs.333862 NR_147141 ENSG00000279727 LINC02033 - long intergenic non-protein coding RNA 2033 ncRNA chr10-1151 chr10 100278086 100278296 + 8.96 0.000 intron (NM_173809, intron 4 of 4) SVA_D|Retroposon|SVA 8173 NM_001001342 282991 Hs.34906 NM_173809 ENSG00000196072 BLOC1S2 BLOS2|BORCS2|CEAP|CEAP11 biogenesis of lysosomal organelles complex 1 subunit 2 protein-coding chr7-5851 chr7 88766552 88766762 + 8.96 0.000 intron (NM_181646, intron 1 of 3) L4_B_Mam|LINE|RTE-X 6957 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chr1-14899 chr1 82777609 82777819 + 8.96 0.000 Intergenic MER66-int|LTR|ERV1 -125469 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr8-4896 chr8 79828873 79829083 + 8.96 0.000 intron (NR_110954, intron 2 of 5) intron (NR_110954, intron 2 of 5) 42759 NR_110954 101927040 Hs.350876 NR_110954 ENSG00000249328 LOC101927040 - uncharacterized LOC101927040 ncRNA chr14-2599 chr14 53790859 53791069 + 8.96 0.000 Intergenic Intergenic 157520 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr10-3777 chr10 125349054 125349264 + 8.96 0.000 Intergenic AluSq4|SINE|Alu -188129 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr1-7986 chr1 204746950 204747160 + 8.96 0.000 Intergenic Intergenic -61317 NM_006338 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr3-4319 chr3 172410504 172410714 + 8.96 0.000 Intergenic MER52A|LTR|ERV1 37847 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr1-7091 chr1 192864603 192864813 + 8.96 0.000 Intergenic MER94B|DNA|hAT-Blackjack 55669 NM_002923 5997 Hs.78944 NM_002923 ENSG00000116741 RGS2 G0S8 regulator of G protein signaling 2 protein-coding chr12-2361 chr12 12899700 12899910 + 8.96 0.000 intron (NM_003979, intron 1 of 3) intron (NM_003979, intron 1 of 3) 8783 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr19-3786 chr19 3389837 3390047 + 8.96 0.000 intron (NM_001245002, intron 2 of 10) AluSp|SINE|Alu 23359 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chrX-543 chrX 154459284 154459494 + 8.96 0.000 intron (NM_017514, intron 1 of 32) intron (NM_017514, intron 1 of 32) 1108 NM_017514 55558 Hs.632839 NM_017514 ENSG00000130827 PLXNA3 6.3|HSSEXGENE|PLXN3|PLXN4|XAP-6 plexin A3 protein-coding chrX-2727 chrX 124274638 124274848 + 8.96 0.000 Intergenic Intergenic -57917 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr22-1593 chr22 17009471 17009681 + 8.96 0.000 Intergenic Intergenic -1354 NR_159481 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2 associated binding protein family member 4 protein-coding chr7-6118 chr7 121784141 121784351 + 8.96 0.000 Intergenic L1ME3|LINE|L1 -88915 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr22-2484 chr22 21721944 21722154 + 8.96 0.000 intron (NM_013313, intron 1 of 4) L1MB1|LINE|L1 13745 NM_013313 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr3-3724 chr3 183918330 183918540 + 8.96 0.000 Intergenic MIRb|SINE|MIR 31635 NR_039650 100616127 NR_039650 ENSG00000263932 MIR4448 - microRNA 4448 ncRNA chr10-4890 chr10 18666919 18667129 + 8.96 0.000 intron (NM_178815, intron 2 of 5) intron (NM_178815, intron 2 of 5) 7593 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding chr3-5085 chr3 46096482 46096692 + 8.96 0.000 Intergenic Intergenic -69104 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr17-2473 chr17 59565941 59566151 + 8.96 0.000 intron (NM_024612, intron 1 of 17) intron (NM_024612, intron 1 of 17) 436 NM_024612 79665 Hs.29403 NM_024612 ENSG00000108406 DHX40 ARG147|DDX40|PAD DEAH-box helicase 40 protein-coding chrX-4957 chrX 112879430 112879640 + 8.96 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -38704 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chr2-8253 chr2 99489419 99489629 + 8.96 0.000 intron (NR_135652, intron 1 of 21) CpG 493 NM_001321455 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr3-3707 chr3 173335406 173335616 + 8.96 0.000 Intergenic L2a|LINE|L2 -60441 NM_001365929 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr10-4506 chr10 88164812 88165022 + 8.96 0.000 Intergenic Intergenic 301292 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr2-4452 chr2 215171293 215171503 + 8.96 0.000 Intergenic Intergenic -32772 NR_103740 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chrX-4414 chrX 53405474 53405684 + 8.96 0.000 TTS (NR_106916) TTS (NR_106916) 186 NR_106916 102465516 NR_106916 ENSG00000278204 MIR6857 hsa-mir-6857 microRNA 6857 ncRNA chr12-5019 chr12 83767994 83768204 + 8.96 0.000 Intergenic Intergenic 1080944 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chrX-1677 chrX 2888969 2889179 + 8.96 0.000 Intergenic MER50B|LTR|ERV1 -15830 NR_144459 100506356 Hs.528631 NR_144459 ENSG00000229851 ARSD-AS1 - ARSD antisense RNA 1 ncRNA chr1-4755 chr1 8740976 8741186 + 8.96 0.000 intron (NM_001042681, intron 1 of 22) Tigger3b|DNA|TcMar-Tigger 76559 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr1-9617 chr1 45908743 45908953 + 8.96 0.000 intron (NM_001324320, intron 4 of 29) L1MEc|LINE|L1 44500 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr21-768 chr21 43834313 43834523 + 8.96 0.000 Intergenic Intergenic -21851 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chr2-4992 chr2 216427184 216427394 + 8.96 0.000 intron (NM_001127207, intron 6 of 17) intron (NM_001127207, intron 6 of 17) 14524 NM_001127207 50485 Hs.516674 NM_014140 ENSG00000138375 SMARCAL1 HARP|HHARP SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 protein-coding chr6-4057 chr6 136129642 136129852 + 8.96 0.000 intron (NM_018945, intron 3 of 12) intron (NM_018945, intron 3 of 12) -56920 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr3-3814 chr3 16663707 16663917 + 8.96 0.000 Intergenic Intergenic -58389 NM_001351 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr12-8301 chr12 127930004 127930214 + 8.96 0.000 intron (NR_046392, intron 1 of 4) LTR28|LTR|ERV1 14699 NR_046392 100862680 Hs.385496 NR_046392 ENSG00000256193 LINC00507 - long intergenic non-protein coding RNA 507 ncRNA chr2-13842 chr2 176906457 176906667 + 8.96 0.000 Intergenic Intergenic 268808 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr6-8117 chr6 127248356 127248566 + 8.96 0.000 Intergenic Intergenic -18221 NM_001242851 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr17-3451 chr17 33906026 33906236 + 8.96 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 250675 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr17-3119 chr17 28611608 28611818 + 8.96 0.000 intron (NM_001174103, intron 8 of 11) intron (NM_001174103, intron 8 of 11) 2472 NM_001174103 124923 Hs.729077 NM_144610 ENSG00000167524 RSKR SGK494 ribosomal protein S6 kinase related protein-coding chr7-4625 chr7 26922319 26922529 + 8.96 0.000 Intergenic Intergenic -57834 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr22-2683 chr22 37127202 37127412 + 8.96 0.000 3' UTR (NM_000878, exon 10 of 10) 3' UTR (NM_000878, exon 10 of 10) -17594 NM_001289000 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr1-9460 chr1 35500647 35500857 + 8.96 0.000 intron (NM_024874, intron 3 of 20) intron (NM_024874, intron 3 of 20) 56651 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr3-8041 chr3 196151888 196152098 + 8.96 0.000 intron (NR_034088, intron 2 of 2) AluJr|SINE|Alu 9357 NR_034088 401109 Hs.280133 NM_001001699 ENSG00000224652 LINC00885 - long intergenic non-protein coding RNA 885 ncRNA chr17-4581 chr17 82736816 82737026 + 8.96 0.000 intron (NM_022158, intron 1 of 5) intron (NM_022158, intron 1 of 5) 1306 NM_022158 64122 Hs.151135 NM_022158 ENSG00000167363 FN3K - fructosamine 3 kinase protein-coding chr8-3155 chr8 83758568 83758778 + 8.96 0.000 Intergenic Intergenic 354915 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr4-4706 chr4 88003355 88003565 + 8.96 0.000 Intergenic Intergenic -4175 NR_156488 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr2-6322 chr2 70357637 70357847 + 8.96 0.000 Intergenic Intergenic -55675 NM_001329753 84908 Hs.516077 NM_032822 ENSG00000035141 FAM136A - family with sequence similarity 136 member A protein-coding chr7-5192 chr7 10295726 10295936 + 8.96 0.000 Intergenic MER2|DNA|TcMar-Tigger -406845 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr18-2451 chr18 34659736 34659946 + 8.96 0.000 intron (NM_001198939, intron 1 of 21) intron (NM_001198939, intron 1 of 21) -50457 NM_001198941 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chrX-2745 chrX 128261317 128261527 + 8.96 0.000 Intergenic THE1C|LTR|ERVL-MaLR -209019 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr10-8354 chr10 80243471 80243681 + 8.96 0.000 Intergenic LTR48|LTR|ERV1 -4182 NR_136612 100130698 Hs.447456 NR_136612 LOC100130698 - uncharacterized LOC100130698 ncRNA chr12-7621 chr12 79635735 79635945 + 8.96 0.000 intron (NM_001354732, intron 2 of 6) intron (NM_001354732, intron 2 of 6) 54740 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr15-1475 chr15 33064569 33064779 + 8.96 0.000 intron (NM_001277313, intron 6 of 20) intron (NM_001277313, intron 6 of 20) 3500 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr22-2510 chr22 23113647 23113857 + 8.96 0.000 intron (NM_002073, intron 2 of 2) intron (NM_002073, intron 2 of 2) 28238 NM_014433 27156 Hs.526920 NM_014433 ENSG00000100218 RSPH14 RTDR1 radial spoke head 14 homolog protein-coding chr9-7340 chr9 14781024 14781234 + 8.96 0.000 promoter-TSS (NM_001370058) promoter-TSS (NM_001370058) -698 NM_001370061 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr5-4953 chr5 77399189 77399399 + 8.96 0.000 intron (NM_001029854, intron 9 of 20) LTR47A|LTR|ERVL 93022 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr10-8801 chr10 107615383 107615593 + 8.96 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -450782 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr7-7396 chr7 70530364 70530574 + 8.96 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -601675 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr10-3009 chr10 100775260 100775470 + 8.96 0.000 intron (NM_003988, intron 3 of 10) intron (NM_003988, intron 3 of 10) 29654 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr4-6408 chr4 124121621 124121831 + 8.96 0.000 Intergenic Intergenic 347462 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr4-3153 chr4 181972015 181972225 + 8.96 0.000 Intergenic Intergenic -142147 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr8-5582 chr8 87366728 87366938 + 8.96 0.000 intron (NM_173538, intron 10 of 10) LTR78|LTR|ERV1 500418 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr4-6168 chr4 40455806 40456016 + 8.96 0.000 intron (NM_001098634, intron 3 of 6) intron (NM_001098634, intron 3 of 6) 46208 NR_039966 100616274 NR_039966 ENSG00000263642 MIR4802 - microRNA 4802 ncRNA chr3-6371 chr3 87886304 87886514 + 8.96 0.000 intron (NM_001322210, intron 2 of 2) L1PA6|LINE|L1 93703 NM_001322209 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr8-5592 chr8 92300841 92301051 + 8.96 0.000 Intergenic Intergenic -197561 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr6-7503 chr6 63663842 63664052 + 8.96 0.000 intron (NM_001370350, intron 2 of 14) MLT1J|LTR|ERVL-MaLR 17421 NM_015153 23469 Hs.348921 NM_015153 ENSG00000118482 PHF3 - PHD finger protein 3 protein-coding chr12-7154 chr12 48429205 48429415 + 8.96 0.000 Intergenic L1PB1|LINE|L1 -43355 NM_012404 23519 Hs.532658 NM_012404 ENSG00000139223 ANP32D PP32R2 acidic nuclear phosphoprotein 32 family member D protein-coding chr2-8351 chr2 109364295 109364505 + 8.96 0.000 intron (NM_001099289, intron 2 of 9) L1MC1|LINE|L1 -50775 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chrX-3559 chrX 68896574 68896784 + 8.96 0.000 Intergenic Intergenic 67682 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chrX-3322 chrX 121131503 121131713 + 8.96 0.000 Intergenic Intergenic 83998 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chr10-8566 chr10 95236322 95236532 + 8.96 0.000 Intergenic Intergenic 42227 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr15-3275 chr15 77113438 77113648 + 8.96 0.000 3' UTR (NM_024776, exon 8 of 8) 3' UTR (NM_024776, exon 8 of 8) -42434 NM_001168412 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr10-3249 chr10 121684151 121684361 + 8.96 0.000 Intergenic L1MB4|LINE|L1 -85798 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr12-1428 chr12 57342375 57342585 + 8.96 0.000 promoter-TSS (NM_001351209) promoter-TSS (NM_001351209) -24 NM_001351214 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr11-7767 chr11 82792963 82793173 + 8.96 0.000 Intergenic LTR81C|LTR|Gypsy -59204 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr4-4436 chr4 52666887 52667097 + 8.96 0.000 Intergenic Intergenic 7586 NR_125363 643783 Hs.631514 NR_125363 ENSG00000248866 USP46-AS1 - USP46 antisense RNA 1 ncRNA chr16-6691 chr16 70341051 70341261 + 8.96 0.000 intron (NR_039997, intron 2 of 4) intron (NR_039997, intron 2 of 4) 5591 NR_039997 100506083 Hs.635008 NR_039997 ENSG00000261777 LOC100506083 - uncharacterized LOC100506083 ncRNA chr2-4044 chr2 111018427 111018637 + 8.96 0.000 intron (NM_001371254, intron 15 of 18) intron (NM_001371254, intron 15 of 18) 97056 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr14-3769 chr14 52799233 52799443 + 8.96 0.000 Intergenic L2a|LINE|L2 -7731 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding chr3-10099 chr3 111211362 111211572 + 8.96 0.000 Intergenic L2c|LINE|L2 139651 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr15-4529 chr15 55083053 55083263 + 8.96 0.000 intron (NR_135679, intron 1 of 1) L1PA8|LINE|L1 26411 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr1-10462 chr1 161408890 161409100 + 8.96 0.000 Intergenic HERVE-int|LTR|ERV1 -41112 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr11-6208 chr11 46161214 46161424 + 8.96 0.000 Intergenic MIRb|SINE|MIR -10636 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chr13-1554 chr13 30719090 30719300 + 8.96 0.000 intron (NM_001204406, intron 1 of 5) MIR|SINE|MIR 5717 NM_001204406 241 Hs.507658 NM_001629 ENSG00000132965 ALOX5AP FLAP arachidonate 5-lipoxygenase activating protein protein-coding chrX-3675 chrX 104451149 104451359 + 8.96 0.000 Intergenic Intergenic -114945 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr5-2767 chr5 159779058 159779268 + 8.96 0.000 intron (NR_109891, intron 2 of 2) AluSz|SINE|Alu 92221 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr17-5314 chr17 27990697 27990907 + 8.96 0.000 intron (NR_146896, intron 1 of 4) intron (NR_146896, intron 1 of 4) 905 NR_146896 105371708 Hs.385535 NR_146896 LINC01992 - long intergenic non-protein coding RNA 1992 ncRNA chr3-6143 chr3 56864216 56864426 + 8.96 0.000 intron (NM_001128615, intron 4 of 12) L2c|LINE|L2 52115 NM_001289698 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr9-4327 chr9 126843957 126844167 + 8.96 0.000 Intergenic Intergenic -16577 NM_001099270 403341 Hs.177633 NM_203482 ENSG00000177125 ZBTB34 ZNF918 zinc finger and BTB domain containing 34 protein-coding chr13-1755 chr13 110641185 110641395 + 8.96 0.000 TTS (NM_001352252) TTS (NM_001352252) 25706 NM_001242881 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr16-3556 chr16 56120121 56120331 + 8.96 0.000 intron (NR_027078, intron 2 of 4) L2b|LINE|L2 70868 NR_027078 283856 Hs.707433 NR_027078 ENSG00000246379 LOC283856 - uncharacterized LOC283856 ncRNA chr11-5960 chr11 17612159 17612369 + 8.96 0.000 exon (NM_001292063, exon 37 of 56) exon (NM_001292063, exon 37 of 56) 64891 NM_001277269 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding chr10-4768 chr10 4196922 4197132 + 8.96 0.000 Intergenic Intergenic 46885 NR_108040 100652988 Hs.433011 NR_108040 LINC00702 - long intergenic non-protein coding RNA 702 ncRNA chr5-3973 chr5 11376915 11377125 + 8.96 0.000 intron (NM_001288716, intron 4 of 18) intron (NM_001288716, intron 4 of 18) 211897 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr6-5499 chr6 163703835 163704045 + 8.96 0.000 Intergenic MLT1H1-int|LTR|ERVL-MaLR -32456 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr10-2616 chr10 79292570 79292780 + 8.96 0.000 intron (NM_020338, intron 11 of 24) intron (NM_020338, intron 11 of 24) -54794 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr2-5341 chr2 86233304 86233514 + 8.96 0.000 intron (NM_001164732, intron 3 of 4) MIRc|SINE|MIR 33952 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr12-4598 chr12 33883219 33883429 + 8.96 0.000 Intergenic L1PA10|LINE|L1 -139172 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr1-5392 chr1 5861615 5861825 + 8.96 0.000 TTS (NR_039838) TTS (NR_039838) 1021 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr1-8615 chr1 194290902 194291112 + 8.96 0.000 Intergenic Intergenic 986262 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr12-6584 chr12 122953187 122953397 + 8.96 0.000 intron (NM_001243014, intron 2 of 11) AluSx1|SINE|Alu 13171 NM_001243014 23457 Hs.511951 NM_019624 ENSG00000150967 ABCB9 EST122234|TAPL ATP binding cassette subfamily B member 9 protein-coding chr16-4302 chr16 28182237 28182447 + 8.96 0.000 intron (NM_015171, intron 1 of 23) intron (NM_015171, intron 1 of 23) 29623 NM_001270940 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr8-4610 chr8 131457347 131457557 + 8.96 0.000 Intergenic Intergenic -416543 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr11-6064 chr11 31955400 31955610 + 8.96 0.000 Intergenic Intergenic 85813 NR_120527 100506675 Hs.446169 NR_120526 ENSG00000254584 LOC100506675 - uncharacterized LOC100506675 ncRNA chr2-8213 chr2 95763077 95763287 + 8.96 0.000 Intergenic Intergenic 63799 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr19-3200 chr19 48756652 48756862 + 8.96 0.000 intron (NM_019113, intron 2 of 3) MSR1|Satellite|Satellite 1233 NM_019113 26291 Hs.283015 NM_019113 ENSG00000105550 FGF21 - fibroblast growth factor 21 protein-coding chr1-14331 chr1 40095586 40095796 + 8.96 0.000 intron (NM_001363695, intron 1 of 7) L2a|LINE|L2 1561 NM_001363695 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding chr11-7039 chr11 119420387 119420597 + 8.96 0.000 intron (NM_006288, intron 2 of 3) intron (NM_006288, intron 2 of 3) 2070 NM_001311160 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr4-5254 chr4 171587750 171587960 + 8.96 0.000 Intergenic MER70C|LTR|ERVL 50908 NR_147157 105377536 Hs.550719 NR_147157 ENSG00000249297 LINC02174 - long intergenic non-protein coding RNA 2174 ncRNA chr20-3538 chr20 1206876 1207086 + 8.96 0.000 exon (NM_001009612, exon 2 of 2) exon (NM_001009612, exon 2 of 2) 3527 NM_001009612 400831 Hs.148503 NM_001009612 ENSG00000215595 C20orf202 - chromosome 20 open reading frame 202 protein-coding chr5-2278 chr5 39207688 39207898 + 8.96 0.000 intron (NM_001243093, intron 1 of 18) MER20|DNA|hAT-Charlie 11770 NM_001465 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr2-13868 chr2 178687601 178687811 + 8.96 0.000 intron (NM_001256850, intron 125 of 312) intron (NM_001256850, intron 125 of 312) -89220 NR_120594 101927055 Hs.570275 NR_120594 ENSG00000237298 LOC101927055 - uncharacterized LOC101927055 ncRNA chr2-11520 chr2 238942918 238943128 + 8.96 0.000 Intergenic MER20|DNA|hAT-Charlie -16754 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr5-6940 chr5 138776364 138776574 + 8.96 0.000 intron (NM_001323982, intron 2 of 18) SVA_D|Retroposon|SVA -22545 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr8-5261 chr8 134551898 134552108 + 8.96 0.000 intron (NM_020863, intron 11 of 15) intron (NM_020863, intron 11 of 15) -46068 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr3-4019 chr3 65268076 65268286 + 8.96 0.000 Intergenic THE1B|LTR|ERVL-MaLR -580181 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr2-6646 chr2 2777326 2777536 + 8.96 0.000 Intergenic Intergenic 348595 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr16-5274 chr16 56910492 56910702 + 8.96 0.000 intron (NM_001126108, intron 25 of 25) AluJb|SINE|Alu 6333 NR_106923 102466752 NR_106923 ENSG00000283471 MIR6863 hsa-mir-6863 microRNA 6863 ncRNA chrX-5425 chrX 153588944 153589154 + 8.96 0.000 intron (NM_152274, intron 4 of 4) MER77|LTR|ERVL 10090 NM_152274 92002 Hs.496943 NM_152274 ENSG00000262919 CCNQ FAM58A cyclin Q protein-coding chr12-5813 chr12 24980175 24980385 + 8.96 0.000 Intergenic Intergenic 17185 NM_001101339 196415 Hs.434453 NM_001101339 C12orf77 - chromosome 12 open reading frame 77 protein-coding chr12-3994 chr12 23554343 23554553 + 8.96 0.000 intron (NM_001261414, intron 13 of 16) intron (NM_001261414, intron 13 of 16) 30138 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr8-6408 chr8 56738995 56739205 + 8.96 0.000 Intergenic Intergenic -179277 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr2-14201 chr2 208006988 208007198 + 8.96 0.000 intron (NM_001080475, intron 1 of 7) intron (NM_001080475, intron 1 of 7) 18434 NM_001080475 389072 Hs.159188 NM_001080475 ENSG00000178385 PLEKHM3 DAPR|PLEKHM1L pleckstrin homology domain containing M3 protein-coding chr3-2916 chr3 52346940 52347150 + 8.96 0.000 intron (NM_015512, intron 11 of 77) L2b|LINE|L2 30726 NM_015512 25981 Hs.655469 NM_015512 ENSG00000114841 DNAH1 CILD37|DNAHC1|HDHC7|HL-11|HL11|HSRF-1|SPGF18|XLHSRF-1 dynein axonemal heavy chain 1 protein-coding chr15-3708 chr15 45805536 45805746 + 8.96 0.000 intron (NR_135680, intron 1 of 4) intron (NR_135680, intron 1 of 4) 100446 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr10-7487 chr10 11410302 11410512 + 8.96 0.000 Intergenic Intergenic -65733 NR_126062 414196 Hs.729598 NM_001012713 CELF2-AS1 C10orf31 CELF2 antisense RNA 1 ncRNA chr4-8654 chr4 176875311 176875521 + 8.96 0.000 promoter-TSS (NR_149104) promoter-TSS (NR_149104) -286 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr18-1754 chr18 8665608 8665818 + 8.96 0.000 Intergenic MER51A|LTR|ERV1 41908 NR_120598 100287082 Hs.439434 NR_120598 ENSG00000265962 GACAT2 MTCL1-AS1|MTCL1AS1 gastric cancer associated transcript 2 ncRNA chr1-5475 chr1 110491680 110491890 + 8.96 0.000 TTS (NR_003599) TTS (NR_003599) -1527 NR_108042 440602 Hs.708945 NR_108042 ENSG00000235407 CYMP-AS1 - CYMP antisense RNA 1 ncRNA chr12-4361 chr12 3385705 3385915 + 8.96 0.000 intron (NM_001256536, intron 1 of 9) intron (NM_001256536, intron 1 of 9) 4461 NM_001256536 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr12-3208 chr12 54961601 54961811 + 8.96 0.000 intron (NR_147062, intron 10 of 12) MER115|DNA|hAT-Tip100 12026 NM_001351153 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|ITPRID3|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr10-8365 chr10 80555851 80556061 + 8.96 0.000 intron (NM_001145719, intron 1 of 6) intron (NM_001145719, intron 1 of 6) 15137 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr16-4713 chr16 82304456 82304666 + 8.96 0.000 Intergenic L1PA7|LINE|L1 -134337 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr12-1922 chr12 94795578 94795788 + 8.96 0.000 Intergenic Intergenic -38715 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr20-1040 chr20 53738633 53738843 + 8.96 0.000 Intergenic Intergenic 130384 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chrX-2058 chrX 19152880 19153090 + 8.96 0.000 Intergenic Intergenic -30348 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr2-6499 chr2 180007161 180007371 + 8.96 0.000 promoter-TSS (NM_020943) promoter-TSS (NM_020943) 31 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr1-5724 chr1 85428270 85428480 + 8.96 0.000 intron (NM_001134445, intron 2 of 6) THE1B|LTR|ERVL-MaLR -23869 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr11-6388 chr11 64786445 64786655 + 8.96 0.000 3' UTR (NM_004579, exon 32 of 32) 3' UTR (NM_004579, exon 32 of 32) -7706 NM_201997 7536 Hs.502829 NM_004630 ENSG00000168066 SF1 BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162 splicing factor 1 protein-coding chr1-16174 chr1 206562027 206562237 + 8.96 0.000 intron (NM_182665, intron 1 of 4) intron (NM_182665, intron 1 of 4) 4968 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr13-1869 chr13 23938556 23938766 + 8.96 0.000 intron (NR_073430, intron 3 of 4) REP522|Satellite|telo 10654 NR_073430 400110 Hs.744780 NM_207439 ANKRD20A19P - ankyrin repeat domain 20 family member A19, pseudogene pseudo chr12-4829 chr12 57272960 57273170 + 8.96 0.000 intron (NM_001351215, intron 12 of 22) intron (NM_001351215, intron 12 of 22) -21878 NM_001286257 246329 Hs.417595 NM_145064 ENSG00000185482 STAC3 MYPBB|NAM SH3 and cysteine rich domain 3 protein-coding chr13-277 chr13 95025222 95025432 + 8.96 0.000 intron (NM_005845, intron 30 of 30) (CA)n|Simple_repeat|Simple_repeat 65286 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr5-4578 chr5 25673329 25673539 + 8.96 0.000 Intergenic Intergenic 482481 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr8-5680 chr8 120832649 120832859 + 8.96 0.000 Intergenic Intergenic -20708 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chrX-1314 chrX 129782763 129782973 + 8.96 0.000 intron (NM_018990, intron 1 of 7) intron (NM_018990, intron 1 of 7) 2919 NM_018990 54440 Hs.61469 NM_018990 ENSG00000122122 SASH3 753P9|CXorf9|HACS2|SH3D6C|SLY SAM and SH3 domain containing 3 protein-coding chr19-6478 chr19 17526379 17526589 + 8.96 0.000 promoter-TSS (NM_001321827) promoter-TSS (NM_001321827) -783 NM_001321827 199786 Hs.434133 NM_173544 ENSG00000167483 NIBAN3 BCNP1|FAM129C niban apoptosis regulator 3 protein-coding chr5-5231 chr5 116923219 116923429 + 8.96 0.000 Intergenic Intergenic -161115 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr4-3079 chr4 148333565 148333775 + 8.96 0.000 intron (NM_000901, intron 2 of 8) intron (NM_000901, intron 2 of 8) 108744 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr4-5174 chr4 157716847 157717057 + 8.96 0.000 Intergenic Intergenic 144462 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr12-2137 chr12 97555757 97555967 + 8.96 0.000 intron (NR_152618, intron 8 of 10) intron (NR_152618, intron 8 of 10) -7950 NR_029678 406926 NR_029678 ENSG00000207586 MIR135A2 MIRN135-2|MIRN135A2|mir-135a-2 microRNA 135a-2 ncRNA chr5-5708 chr5 167454665 167454875 + 8.96 0.000 intron (NM_001122679, intron 3 of 29) MLT1K|LTR|ERVL-MaLR -118889 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr19-3944 chr19 50792904 50793114 + 8.96 0.000 intron (NM_033068, intron 6 of 10) MER46C|DNA|TcMar-Tigger 2594 NM_033068 93650 NM_033068 ENSG00000142513 ACP4 ACPT|AI1J acid phosphatase 4 protein-coding chr5-9077 chr5 171681338 171681548 + 8.96 0.000 Intergenic MIRb|SINE|MIR -104429 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr17-1135 chr17 67993715 67993925 + 8.96 0.000 promoter-TSS (NM_181655) promoter-TSS (NM_181655) -214 NM_181656 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr4-6471 chr4 146848881 146849091 + 8.96 0.000 intron (NR_133922, intron 8 of 13) intron (NR_133922, intron 8 of 13) 96878 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr4-4760 chr4 98664231 98664441 + 8.96 0.000 non-coding (NR_148380, exon 3 of 3) non-coding (NR_148380, exon 3 of 3) 5434 NR_148380 105377342 Hs.122081 NR_148380 LOC105377342 - uncharacterized LOC105377342 ncRNA chr13-4008 chr13 71181997 71182207 + 8.96 0.000 Intergenic L1ME2|LINE|L1 166961 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr16-3538 chr16 35246640 35246850 + 8.96 0.000 Intergenic Intergenic 50986 NR_157262 112268173 Hs.369226 NR_157261 LOC112268173 - uncharacterized LOC112268173 ncRNA chr1-5979 chr1 40659003 40659213 + 8.96 0.000 intron (NM_014747, intron 1 of 7) L2c|LINE|L2 6574 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr16-2435 chr16 81590655 81590865 + 8.96 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) -20588 NR_106759 102465251 NR_106759 ENSG00000275109 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA chr10-7884 chr10 49154027 49154237 + 8.96 0.000 TTS (NM_001010863) TTS (NM_001010863) -20112 NM_001164484 170370 Hs.646291 NM_001164484 ENSG00000172538 FAM170B C10orf73 family with sequence similarity 170 member B protein-coding chr22-1758 chr22 25364387 25364597 + 8.96 0.000 intron (NM_001135772, intron 2 of 5) intron (NM_001135772, intron 2 of 5) -1935 NM_182492 91355 Hs.634058 NM_182492 ENSG00000100068 LRP5L - LDL receptor related protein 5 like protein-coding chr3-4671 chr3 42683983 42684193 + 8.96 0.000 Intergenic Intergenic -1449 NM_152393 131377 Hs.350288 NM_152393 ENSG00000157119 KLHL40 KBTBD5|NEM8|SRYP|SYRP kelch like family member 40 protein-coding chrX-1148 chrX 40506916 40507126 + 8.96 0.000 Intergenic (GCTGG)n|Simple_repeat|Simple_repeat -73949 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chrX-2775 chrX 130895243 130895453 + 8.96 0.000 intron (NM_006375, intron 2 of 14) intron (NM_006375, intron 2 of 14) 7969 NM_001281736 10495 Hs.171458 NM_006375 ENSG00000165675 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding chr2-8756 chr2 162339940 162340150 + 8.96 0.000 intron (NM_001330265, intron 2 of 8) Tigger12|DNA|TcMar-Tigger -4087 NM_012198 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr13-1380 chr13 101416491 101416701 + 8.96 0.000 promoter-TSS (NM_052867) promoter-TSS (NM_052867) -88 NM_001350751 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr2-7288 chr2 236299930 236300140 + 8.96 0.000 Intergenic MSTA|LTR|ERVL-MaLR -35690 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr6-4090 chr6 146075417 146075627 + 8.96 0.000 intron (NM_001278065, intron 2 of 9) L2a|LINE|L2 46324 NM_001278067 2911 Hs.32945 NM_000838 ENSG00000152822 GRM1 GPRC1A|MGLU1|MGLUR1|PPP1R85|SCA44|SCAR13 glutamate metabotropic receptor 1 protein-coding chr17-7501 chr17 16968308 16968518 + 8.96 0.000 intron (NM_012452, intron 1 of 4) L1MB7|LINE|L1 3675 NM_012452 23495 Hs.158341 NM_012452 ENSG00000240505 TNFRSF13B CD267|CVID|CVID2|IGAD2|RYZN|TACI|TNFRSF14B TNF receptor superfamily member 13B protein-coding chr9-4920 chr9 10947223 10947433 + 8.96 0.000 Intergenic LTR1A2|LTR|ERV1 334122 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr9-7966 chr9 92007115 92007325 + 8.96 0.000 Intergenic Intergenic -56992 NM_001318204 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr19-2716 chr19 31409059 31409269 + 8.96 0.000 Intergenic Intergenic -59728 NR_138034 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr10-2007 chr10 59079857 59080067 + 8.96 0.000 Intergenic Intergenic 80444 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA chr2-8791 chr2 167365188 167365398 + 8.96 0.000 Intergenic Intergenic 177921 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr6-6294 chr6 40254977 40255187 + 8.96 0.000 Intergenic L1PB2|LINE|L1 100924 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr5-3712 chr5 15112139 15112349 + 8.96 0.000 Intergenic MIR|SINE|MIR 154316 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr1-4861 chr1 30478552 30478762 + 8.96 0.000 Intergenic MIR|SINE|MIR -240115 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr2-6316 chr2 69685681 69685891 + 8.96 0.000 intron (NM_001320698, intron 2 of 14) L3|LINE|CR1 41978 NM_001320698 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chrX-5388 chrX 151326721 151326931 + 8.96 0.000 Intergenic Intergenic -69769 NM_001363810 203547 Hs.58633 NM_001017980 ENSG00000160131 VMA21 MEAX|XMEA vacuolar ATPase assembly factor VMA21 protein-coding chr7-4895 chr7 123682825 123683035 + 8.96 0.000 3' UTR (NM_003941, exon 11 of 11) 3' UTR (NM_003941, exon 11 of 11) 27064 NM_207163 442721 Hs.592260 NM_207163 ENSG00000170807 LMOD2 C-LMOD|CLMOD leiomodin 2 protein-coding chrX-4998 chrX 118129898 118130108 + 8.96 0.000 Intergenic Intergenic -12663 NM_001168301 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr4-8373 chr4 148640159 148640369 + 8.96 0.000 Intergenic L1ME3A|LINE|L1 -195566 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr3-8104 chr3 16379006 16379216 + 8.96 0.000 intron (NM_015150, intron 4 of 9) intron (NM_015150, intron 4 of 9) 113899 NR_148220 92106 Hs.655449 NM_138381 ENSG00000154814 OXNAD1 - oxidoreductase NAD binding domain containing 1 protein-coding chr8-2634 chr8 68697699 68697909 + 8.96 0.000 intron (NR_146187, intron 8 of 13) intron (NR_146187, intron 8 of 13) -366313 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr18-1821 chr18 15370850 15371060 + 8.96 0.000 Intergenic Intergenic -45036 NR_027417 644669 Hs.579474 NR_027417 ENSG00000215512 LOC644669 - ankyrin repeat domain 30B pseudogene pseudo chr10-9067 chr10 124861049 124861259 + 8.96 0.000 Intergenic L1MEd|LINE|L1 59335 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr2-3351 chr2 221818358 221818568 + 8.96 0.000 Intergenic Intergenic -244261 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr2-8162 chr2 85094650 85094860 + 8.96 0.000 Intergenic Charlie6|DNA|hAT-Charlie -27408 NR_146453 100996478 Hs.434398 NR_146453 ENSG00000260840 LINC01964 - long intergenic non-protein coding RNA 1964 ncRNA chr10-4253 chr10 133462058 133462268 + 8.96 0.000 intron (NR_149718, intron 7 of 12) intron (NR_149718, intron 7 of 12) 8235 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chrX-1611 chrX 107655399 107655609 + 8.96 0.000 Intergenic Intergenic 27080 NM_001204402 5631 Hs.56 NM_002764 ENSG00000147224 PRPS1 ARTS|CMTX5|DFN2|DFNX1|PPRibP|PRS-I|PRSI phosphoribosyl pyrophosphate synthetase 1 protein-coding chr3-3763 chr3 8937210 8937420 + 8.96 0.000 intron (NM_020165, intron 6 of 12) intron (NM_020165, intron 6 of 12) 26157 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr9-5514 chr9 105876595 105876805 + 8.96 0.000 Intergenic L1MC3|LINE|L1 182159 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr4-6150 chr4 33212495 33212705 + 8.96 0.000 Intergenic AluSz|SINE|Alu 827293 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr2-8107 chr2 77773676 77773886 + 8.96 0.000 intron (NR_110288, intron 3 of 3) THE1B-int|LTR|ERVL-MaLR -142153 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA chr2-6921 chr2 108065629 108065839 + 8.96 0.000 Intergenic Intergenic -12979 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA chr5-8500 chr5 133533107 133533317 + 8.96 0.000 intron (NM_015082, intron 3 of 15) MLT1D|LTR|ERVL-MaLR 79329 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr3-10194 chr3 120129774 120129984 + 8.96 0.000 Intergenic Intergenic -35432 NM_001354596 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr10-7019 chr10 77613531 77613741 + 8.96 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 24172 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr12-5786 chr12 10740267 10740477 + 8.96 0.000 Intergenic AluJr|SINE|Alu -9862 NR_120463 101928162 Hs.112950 NR_120463 ENSG00000256888 LINC02366 - long intergenic non-protein coding RNA 2366 ncRNA chr1-15784 chr1 175653371 175653581 + 8.96 0.000 intron (NM_003285, intron 1 of 22) L1ME5|LINE|L1 90119 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr10-4478 chr10 79327779 79327989 + 8.96 0.000 Intergenic Intergenic -19585 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr1-14638 chr1 57330140 57330350 + 8.96 0.000 intron (NM_001353980, intron 4 of 5) intron (NM_001353980, intron 4 of 5) 92867 NM_001365793 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr2-6259 chr2 44733476 44733686 + 8.96 0.000 intron (NM_024766, intron 7 of 10) L1MEc|LINE|L1 205307 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr9-6731 chr9 12564332 12564542 + 8.96 0.000 Intergenic MLT1J2-int|LTR|ERVL-MaLR -128948 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr11-2864 chr11 13940014 13940224 + 8.96 0.000 Intergenic Intergenic -15256 NR_135052 101928132 Hs.568970 NR_135052 ENSG00000254438 LINC02683 - long intergenic non-protein coding RNA 2683 ncRNA chr17-5798 chr17 63832787 63832997 + 8.96 0.000 TTS (NM_002805) TTS (NM_002805) 5208 NM_001199163 5705 Hs.79387 NM_002805 ENSG00000087191 PSMC5 S8|SUG-1|SUG1|TBP10|TRIP1|p45|p45/SUG proteasome 26S subunit, ATPase 5 protein-coding chr9-5666 chr9 123198335 123198545 + 8.96 0.000 intron (NR_033234, intron 1 of 18) L1PB3|LINE|L1 70146 NM_001171137 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr3-7775 chr3 72036897 72037107 + 8.96 0.000 intron (NR_104116, intron 6 of 6) intron (NR_104116, intron 6 of 6) 63453 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr13-2682 chr13 87677753 87677963 + 8.96 0.000 exon (NM_015567, exon 2 of 2) exon (NM_015567, exon 2 of 2) 5243 NM_015567 26050 Hs.591208 NM_015567 ENSG00000165300 SLITRK5 LRRC11|bA364G4.2 SLIT and NTRK like family member 5 protein-coding chrX-4322 chrX 45194736 45194946 + 8.96 0.000 intron (NM_176819, intron 1 of 4) MIR3|SINE|MIR 6035 NM_176819 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr16-5687 chr16 74175842 74176052 + 8.96 0.000 Intergenic Intergenic 39574 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr11-7186 chr11 130719502 130719712 + 8.96 0.000 Intergenic Intergenic 46651 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding chr9-6989 chr9 111559315 111559525 + 8.96 0.000 intron (NM_001146109, intron 9 of 9) intron (NM_001146109, intron 9 of 9) 34241 NM_133464 158399 Hs.584864 NM_133464 ENSG00000173258 ZNF483 ZKSCAN16|ZSCAN48 zinc finger protein 483 protein-coding chr5-5069 chr5 94983904 94984114 + 8.96 0.000 intron (NM_001297777, intron 2 of 19) L3|LINE|CR1 97857 NM_001002796 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr5-9080 chr5 171871136 171871346 + 8.96 0.000 intron (NM_012300, intron 9 of 12) intron (NM_012300, intron 9 of 12) 85369 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr1-7466 chr1 77282594 77282804 + 8.96 0.000 promoter-TSS (NM_012093) promoter-TSS (NM_012093) -388 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr7-3696 chr7 51080802 51081012 + 8.96 0.000 intron (NM_001287438, intron 7 of 7) intron (NM_001287438, intron 7 of 7) 235902 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr4-2136 chr4 76958207 76958417 + 8.96 0.000 intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 8560 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr7-9301 chr7 127551485 127551695 + 8.96 0.000 Intergenic MER41D|LTR|ERV1 34006 NM_024523 79571 Hs.521168 NM_024523 ENSG00000179562 GCC1 GCC1P|GCC88 GRIP and coiled-coil domain containing 1 protein-coding chr7-4484 chr7 141909668 141909878 + 8.96 0.000 Intergenic Intergenic -9103 NM_001001656 130075 Hs.690171 NM_001001656 ENSG00000258083 OR9A4 - olfactory receptor family 9 subfamily A member 4 protein-coding chr10-1771 chr10 58756177 58756387 + 8.96 0.000 intron (NM_001080512, intron 3 of 20) intron (NM_001080512, intron 3 of 20) 41267 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr12-6098 chr12 124006954 124007164 + 8.96 0.000 intron (NM_001204298, intron 3 of 4) intron (NM_001204298, intron 3 of 4) 33844 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr6-2825 chr6 159455601 159455811 + 8.96 0.000 Intergenic Intergenic 72175 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA chr20-2706 chr20 47592807 47593017 + 8.96 0.000 intron (NM_181659, intron 2 of 22) intron (NM_181659, intron 2 of 22) 91025 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr17-8688 chr17 82917885 82918095 + 8.96 0.000 intron (NM_005993, intron 23 of 38) intron (NM_005993, intron 23 of 38) -77968 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr13-2423 chr13 45351622 45351832 + 8.96 0.000 intron (NR_024458, intron 3 of 10) intron (NR_024458, intron 3 of 10) 10382 NR_024458 100190939 Hs.375766 NR_024458 TPT1-AS1 - TPT1 antisense RNA 1 ncRNA chr1-6330 chr1 3603759 3603969 + 8.96 0.000 intron (NM_001409, intron 1 of 36) intron (NM_001409, intron 1 of 36) 7644 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chr13-2265 chr13 27342724 27342934 + 8.96 0.000 Intergenic Intergenic 71652 NM_001331126 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr12-7277 chr12 52592939 52593149 + 8.96 0.000 intron (NM_080747, intron 2 of 8) Charlie2a|DNA|hAT-Charlie 8419 NM_001146226 140807 Hs.662013 NM_080747 ENSG00000170486 KRT72 K6IRS2|K6irs|KRT6|KRT6IRS2 keratin 72 protein-coding chr8-3586 chr8 136503944 136504154 + 8.96 0.000 Intergenic Intergenic -26749 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr7-8748 chr7 77369098 77369308 + 8.96 0.000 intron (NR_146937, intron 12 of 31) intron (NR_146937, intron 12 of 31) -45995 NR_110073 101927243 Hs.547753 NR_110073 LOC101927243 - uncharacterized LOC101927243 ncRNA chr3-10505 chr3 136671271 136671481 + 8.96 0.000 intron (NM_005862, intron 1 of 33) intron (NM_005862, intron 1 of 33) 81002 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr5-7684 chr5 55436517 55436727 + 8.96 0.000 intron (NR_103485, intron 5 of 6) intron (NR_103485, intron 5 of 6) 72304 NR_049869 100847019 NR_049869 ENSG00000265135 MIR5687 - microRNA 5687 ncRNA chr14-1810 chr14 36576308 36576518 + 8.96 0.000 Intergenic Intergenic 6201 NM_014360 26257 Hs.234763 NM_014360 ENSG00000136327 NKX2-8 NKX2.8|NKX2H|Nkx2-9 NK2 homeobox 8 protein-coding chr2-14513 chr2 228107963 228108173 + 8.96 0.000 intron (NM_030623, intron 3 of 10) intron (NM_030623, intron 3 of 10) 73577 NM_030623 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr5-7373 chr5 20122115 20122325 + 8.96 0.000 intron (NM_001291956, intron 2 of 14) intron (NM_001291956, intron 2 of 14) -134020 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr5-8544 chr5 135719557 135719767 + 8.96 0.000 intron (NM_001349335, intron 3 of 10) intron (NM_001349335, intron 3 of 10) -65727 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr2-14693 chr2 237724968 237725178 + 8.96 0.000 intron (NM_001137550, intron 7 of 23) intron (NM_001137550, intron 7 of 23) 32868 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr10-3410 chr10 31944701 31944911 + 8.96 0.000 Intergenic Intergenic -15930 NM_001270695 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr19-6991 chr19 48958994 48959204 + 8.96 0.000 intron (NM_138761, intron 4 of 5) AluY|SINE|Alu 4224 NM_001291429 581 Hs.624291 NM_004324 ENSG00000087088 BAX BCL2L4 BCL2 associated X, apoptosis regulator protein-coding chrX-452 chrX 112840813 112841023 + 8.96 0.000 promoter-TSS (NM_133265) promoter-TSS (NM_133265) -87 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chr21-1574 chr21 14556434 14556644 + 8.96 0.000 intron (NM_001256370, intron 2 of 8) intron (NM_001256370, intron 2 of 8) -10179 NM_001286523 64092 Hs.473341 NM_022136 ENSG00000155307 SAMSN1 HACS1|NASH1|SASH2|SH3D6B|SLy2 SAM domain, SH3 domain and nuclear localization signals 1 protein-coding chr14-1768 chr14 92344772 92344982 + 8.96 0.000 intron (NM_153647, intron 3 of 17) intron (NM_153647, intron 3 of 17) 21069 NM_153646 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr9-8775 chr9 133820511 133820721 + 8.96 0.000 intron (NM_001134398, intron 4 of 29) AluYe5|SINE|Alu -80661 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr9-7296 chr9 9167539 9167749 + 8.96 0.000 intron (NM_002839, intron 10 of 45) AluSp|SINE|Alu 309626 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr5-3885 chr5 147664257 147664467 + 8.96 0.000 intron (NM_001282282, intron 1 of 20) intron (NM_001282282, intron 1 of 20) 104368 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA chr4-1336 chr4 158578541 158578751 + 8.96 0.000 intron (NR_045580, intron 2 of 17) intron (NR_045580, intron 2 of 17) 56764 NR_045583 59350 Hs.591686 NM_021634 ENSG00000171509 RXFP1 LGR7|RXFPR1 relaxin family peptide receptor 1 protein-coding chr22-1522 chr22 50627188 50627398 + 8.96 0.000 exon (NM_001362782, exon 2 of 8) exon (NM_001362782, exon 2 of 8) 859 NM_000487 410 Hs.88251 NM_000487 ENSG00000100299 ARSA ASA|MLD arylsulfatase A protein-coding chr3-8788 chr3 5300390 5300600 + 8.96 0.000 Intergenic MER68|LTR|ERVL -50240 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr1-9520 chr1 38930304 38930514 + 8.96 0.000 promoter-TSS (NM_001304746) promoter-TSS (NM_001304746) -890 NM_001304746 54933 Hs.524626 NM_017821 ENSG00000158315 RHBDL2 RRP2 rhomboid like 2 protein-coding chr10-5000 chr10 32122314 32122524 + 8.96 0.000 Intergenic MER52A|LTR|ERV1 -65994 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr1-5470 chr1 94378505 94378715 + 8.96 0.000 Intergenic LTR12B|LTR|ERV1 -39767 NM_001122674 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr10-3380 chr10 24557062 24557272 + 8.96 0.000 Intergenic Intergenic 65676 NR_160024 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr16-3994 chr16 89939941 89940151 + 8.96 0.000 Intergenic AluSx3|SINE|Alu -8685 NM_001242821 54849 Hs.62771 NM_017702 ENSG00000140995 DEF8 - differentially expressed in FDCP 8 homolog protein-coding chr22-2649 chr22 35502653 35502863 + 8.96 0.000 Intergenic Intergenic -37736 NM_001366725 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr5-5064 chr5 93519757 93519967 + 8.96 0.000 intron (NR_109825, intron 5 of 8) intron (NR_109825, intron 5 of 8) 51481 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr2-7341 chr2 623322 623532 + 8.96 0.000 Intergenic Intergenic 53277 NM_001352681 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr2-8454 chr2 121402411 121402621 + 8.96 0.000 intron (NM_015282, intron 26 of 38) intron (NM_015282, intron 26 of 38) -117314 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr2-11078 chr2 122104040 122104250 + 8.96 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 348494 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr19-6247 chr19 6843801 6844011 + 8.96 0.000 intron (NM_001258206, intron 21 of 25) MER104|DNA|TcMar-Tc2 -43673 NM_001974 2015 Hs.2375 NM_001974 ENSG00000174837 ADGRE1 EMR1|TM7LN3 adhesion G protein-coupled receptor E1 protein-coding chr9-8559 chr9 127304969 127305179 + 8.96 0.000 intron (NR_104591, intron 2 of 26) L1ME3|LINE|L1 40300 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr4-3019 chr4 128039788 128039998 + 8.96 0.000 TTS (NM_001319305) TTS (NM_001319305) -21419 NM_178043 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr12-7540 chr12 70488289 70488499 + 8.96 0.000 Intergenic MER41A|LTR|ERV1 121630 NM_002837 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase receptor type B protein-coding chr3-5029 chr3 31847837 31848047 + 8.96 0.000 intron (NM_017784, intron 3 of 11) LTR33A|LTR|ERVL -133808 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr1-10128 chr1 102066284 102066494 + 8.96 0.000 Intergenic L1PA4|LINE|L1 -69155 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr6-6663 chr6 161084314 161084524 + 8.96 0.000 intron (NM_005922, intron 6 of 26) intron (NM_005922, intron 6 of 26) 77563 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr7-6795 chr7 27451603 27451813 + 8.96 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -164266 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr15-3089 chr15 63495035 63495245 + 8.96 0.000 Intergenic Intergenic -9371 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr4-2733 chr4 6641351 6641561 + 8.96 0.000 intron (NM_001272054, intron 2 of 2) CpG 1365 NM_033296 93621 Hs.406590 NM_033296 ENSG00000179010 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding chr17-3523 chr17 66813304 66813514 + 8.96 0.000 Intergenic Intergenic -21708 NM_145811 27091 Hs.278907 NM_014404 ENSG00000075429 CACNG5 - calcium voltage-gated channel auxiliary subunit gamma 5 protein-coding chr22-1578 chr22 45502781 45502991 + 8.96 0.000 promoter-TSS (NM_001996) promoter-TSS (NM_001996) 3 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr19-5012 chr19 47480958 47481168 + 8.96 0.000 intron (NM_007059, intron 4 of 11) intron (NM_007059, intron 4 of 11) 3156 NM_001291296 11133 Hs.25441 NM_007059 ENSG00000118162 KPTN 2E4|MRT41 kaptin, actin binding protein protein-coding chr6-4928 chr6 98714957 98715167 + 8.96 0.000 Intergenic Intergenic 116638 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr10-5016 chr10 33299769 33299979 + 8.96 0.000 intron (NM_001244973, intron 2 of 16) intron (NM_001244973, intron 2 of 16) 34793 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr4-5751 chr4 58508589 58508799 + 8.96 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 27634 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr10-6643 chr10 101324884 101325094 + 8.96 0.000 Intergenic Intergenic -29044 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr2-7602 chr2 26174559 26174769 + 8.96 0.000 intron (NM_001168241, intron 1 of 5) intron (NM_001168241, intron 1 of 5) 1576 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr12-7155 chr12 48441266 48441476 + 8.96 0.000 Intergenic AluSx|SINE|Alu -31294 NM_012404 23519 Hs.532658 NM_012404 ENSG00000139223 ANP32D PP32R2 acidic nuclear phosphoprotein 32 family member D protein-coding chr5-8275 chr5 113029574 113029784 + 8.96 0.000 intron (NM_001085377, intron 17 of 18) intron (NM_001085377, intron 17 of 18) 52881 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr6-5573 chr6 17524695 17524905 + 8.96 0.000 intron (NM_006366, intron 7 of 12) MER66A|LTR|ERV1 -13535 NR_110855 101928491 Hs.622876 NR_110855 LOC101928491 - uncharacterized LOC101928491 ncRNA chr2-4989 chr2 211981392 211981602 + 8.96 0.000 intron (NM_001042599, intron 2 of 26) intron (NM_001042599, intron 2 of 26) 444863 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr13-3712 chr13 38997586 38997796 + 8.96 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -6832 NM_001144033 161003 Hs.327794 NM_145286 ENSG00000133115 STOML3 Epb7.2l|SRO stomatin like 3 protein-coding chr9-5508 chr9 105246916 105247126 + 8.96 0.000 intron (NM_001330731, intron 1 of 15) intron (NM_001330731, intron 1 of 15) 2370 NM_001286730 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr7-2393 chr7 46054589 46054799 + 8.96 0.000 Intergenic L1M4|LINE|L1 -133422 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr9-4445 chr9 19129888 19130098 + 8.96 0.000 Intergenic Intergenic -2387 NR_038064 123 Hs.3416 NM_001122 ENSG00000147872 PLIN2 ADFP|ADRP perilipin 2 protein-coding chr7-2247 chr7 151142329 151142539 + 8.96 0.000 exon (NM_001350102, exon 14 of 16) exon (NM_001350102, exon 14 of 16) 25114 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr18-2811 chr18 5028824 5029034 + 8.96 0.000 Intergenic Intergenic -52253 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA chr2-8028 chr2 70589805 70590015 + 8.96 0.000 Intergenic ERVL-E-int|LTR|ERVL -36084 NM_003236 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr14-3894 chr14 96948543 96948753 + 8.96 0.000 Intergenic THE1D|LTR|ERVL-MaLR 5069 NR_104113 145249 Hs.592323 NR_104113 ENSG00000225163 LINC00618 C14orf63 long intergenic non-protein coding RNA 618 ncRNA chr16-3005 chr16 29265346 29265556 + 8.96 0.000 Intergenic Intergenic -36836 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr1-14735 chr1 66685151 66685361 + 8.96 0.000 intron (NM_032291, intron 15 of 24) intron (NM_032291, intron 15 of 24) 56816 NR_036060 100422871 NR_036060 ENSG00000264720 MIR3117 mir-3117 microRNA 3117 ncRNA chr6-4906 chr6 96106003 96106213 + 8.96 0.000 intron (NM_006581, intron 1 of 2) intron (NM_006581, intron 1 of 2) 90134 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr14-2266 chr14 22829775 22829985 + 8.96 0.000 promoter-TSS (NM_001318870) promoter-TSS (NM_001318870) -7 NM_178336 122704 Hs.355935 NM_178336 ENSG00000172590 MRPL52 - mitochondrial ribosomal protein L52 protein-coding chrX-2394 chrX 72029465 72029675 + 8.96 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -14839 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr4-6696 chr4 3263641 3263851 + 8.96 0.000 Intergenic Intergenic 14587 NM_001042690 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr8-2834 chr8 130048219 130048429 + 8.96 0.000 Intergenic MIRb|SINE|MIR -31195 NM_001353245 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr6-5544 chr6 168988337 168988547 + 8.96 0.000 Intergenic Intergenic -24060 NR_136250 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr14-2879 chr14 34226426 34226636 + 8.96 0.000 Intergenic Intergenic 235709 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chrX-1120 chrX 22699699 22699909 + 8.96 0.000 intron (NR_073010, intron 4 of 11) intron (NR_073010, intron 4 of 11) -300156 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr9-6413 chr9 39017098 39017308 + 8.96 0.000 Intergenic L1MC2|LINE|L1 271100 NM_033655 79937 Hs.128474 NM_033655 ENSG00000106714 CNTNAP3 CASPR3|CNTNAP3A contactin associated protein like 3 protein-coding chr16-3582 chr16 69361603 69361813 + 8.96 0.000 intron (NM_005652, intron 7 of 9) intron (NM_005652, intron 7 of 9) -9922 NM_144676 146456 Hs.729118 NM_144676 ENSG00000157315 TMED6 PRO34237|SPLL9146|p24g5 transmembrane p24 trafficking protein 6 protein-coding chr13-2561 chr13 66501517 66501727 + 8.96 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) 283372 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr11-3861 chr11 76290681 76290891 + 8.96 0.000 Intergenic L1ME3A|LINE|L1 -84284 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr6-3608 chr6 102249435 102249645 + 8.96 0.000 Intergenic (CTATTA)n|Simple_repeat|Simple_repeat 850555 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr8-2716 chr8 99224041 99224251 + 8.96 0.000 intron (NM_017890, intron 17 of 61) intron (NM_017890, intron 17 of 61) 210880 NM_015243 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr2-6802 chr2 53621081 53621291 + 8.96 0.000 Intergenic L1ME3C|LINE|L1 -146597 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr12-6884 chr12 21594880 21595090 + 8.96 0.000 intron (NM_021957, intron 1 of 15) L1M2|LINE|L1 9862 NM_021957 2998 Hs.82614 NM_021957 ENSG00000111713 GYS2 - glycogen synthase 2 protein-coding chr17-3700 chr17 17447324 17447534 + 8.96 0.000 Intergenic Intergenic -29571 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr19-2029 chr19 1310614 1310824 + 8.96 0.000 Intergenic Intergenic 24846 NM_001405 1943 NM_001405 ENSG00000099617 EFNA2 ELF-1|EPLG6|HEK7-L|LERK-6|LERK6 ephrin A2 protein-coding chr15-736 chr15 84748106 84748316 + 8.96 0.000 promoter-TSS (NM_014630) promoter-TSS (NM_014630) -381 NM_014630 9640 Hs.79347 NM_014630 ENSG00000166716 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding chr19-4754 chr19 29487282 29487492 + 8.96 0.000 intron (NR_040029, intron 1 of 9) AluSc8|SINE|Alu 38365 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr2-10837 chr2 56580486 56580696 + 8.96 0.000 Intergenic L1MA4A|LINE|L1 -394821 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr12-5289 chr12 110893028 110893238 + 8.96 0.000 exon (NM_001286243, exon 8 of 11) exon (NM_001286243, exon 8 of 11) 27467 NM_000432 4633 Hs.75535 NM_000432 ENSG00000111245 MYL2 CMH10|MLC-2s/v|MLC2 myosin light chain 2 protein-coding chr21-1418 chr21 14369774 14369984 + 8.96 0.000 Intergenic MIR|SINE|MIR 13267 NM_006948 6782 Hs.352341 NM_006948 ENSG00000155304 HSPA13 STCH heat shock protein family A (Hsp70) member 13 protein-coding chr6-1925 chr6 43241444 43241654 + 8.96 0.000 Intergenic LTR16A|LTR|ERVL -1932 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr2-9553 chr2 239694511 239694721 + 8.96 0.000 Intergenic Intergenic -68244 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr6-1364 chr6 56757387 56757597 + 8.96 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 86173 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr9-6063 chr9 136927783 136927993 + 8.96 0.000 Intergenic L1ME3Cz|LINE|L1 16850 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr8-4507 chr8 120257331 120257541 + 8.96 0.000 intron (NM_021110, intron 23 of 47) intron (NM_021110, intron 23 of 47) 132334 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr4-5189 chr4 159201395 159201605 + 8.96 0.000 intron (NM_001351724, intron 3 of 30) intron (NM_001351724, intron 3 of 30) -26132 NM_001351726 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr2-4264 chr2 227326222 227326432 + 8.96 0.000 intron (NR_102266, intron 1 of 4) intron (NR_102266, intron 1 of 4) 1076 NM_001277064 56947 Hs.471528 NM_020194 ENSG00000168958 MFF C2orf33|EMPF2|GL004 mitochondrial fission factor protein-coding chr6-3122 chr6 104858902 104859112 + 8.96 0.000 intron (NR_146792, intron 1 of 24) intron (NR_146792, intron 1 of 24) 539 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr12-4132 chr12 70065798 70066008 + 8.96 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -177127 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr17-4893 chr17 70172620 70172830 + 8.96 0.000 intron (NM_000891, intron 1 of 1) intron (NM_000891, intron 1 of 1) 3190 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr7-5465 chr7 40884076 40884286 + 8.96 0.000 Intergenic Intergenic 95758 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr4-4856 chr4 112328052 112328262 + 8.96 0.000 intron (NM_001102406, intron 2 of 15) intron (NM_001102406, intron 2 of 15) 30788 NM_001102406 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr7-8882 chr7 91408419 91408629 + 8.96 0.000 Intergenic Intergenic 144091 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr20-2626 chr20 41955229 41955439 + 8.96 0.000 Intergenic Intergenic -336957 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr10-8097 chr10 68856451 68856661 + 8.96 0.000 intron (NM_152709, intron 1 of 3) intron (NM_152709, intron 1 of 3) 29019 NM_001130160 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr1-6917 chr1 150621553 150621763 + 8.96 0.000 3' UTR (NM_207045, exon 5 of 5) 3' UTR (NM_207045, exon 5 of 5) 7475 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr7-8488 chr7 50956056 50956266 + 8.96 0.000 Intergenic Intergenic -162708 NM_001371008 chr3-7055 chr3 174957469 174957679 + 8.96 0.000 intron (NM_207015, intron 1 of 13) intron (NM_207015, intron 1 of 13) 98240 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr14-2411 chr14 60906100 60906310 + 8.96 0.000 intron (NM_001177963, intron 6 of 6) L2a|LINE|L2 74874 NM_020810 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr19-2617 chr19 2954816 2955026 + 8.96 0.000 Intergenic L2a|LINE|L2 -9950 NM_021217 58492 Hs.38004 NM_021217 ENSG00000175691 ZNF77 pT1 zinc finger protein 77 protein-coding chr5-4846 chr5 62888143 62888353 + 8.96 0.000 Intergenic MIR|SINE|MIR 309429 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr9-5594 chr9 114251074 114251284 + 8.96 0.000 intron (NM_032888, intron 25 of 60) intron (NM_032888, intron 25 of 60) 41745 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr9-5115 chr9 35859307 35859517 + 8.96 0.000 3' UTR (NM_001042590, exon 13 of 13) 3' UTR (NM_001042590, exon 13 of 13) 10989 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chr3-4238 chr3 141105870 141106080 + 8.96 0.000 intron (NM_080862, intron 2 of 2) intron (NM_080862, intron 2 of 2) 54628 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr1-16175 chr1 206564421 206564631 + 8.96 0.000 intron (NM_182665, intron 1 of 4) intron (NM_182665, intron 1 of 4) 7362 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr5-1846 chr5 116272491 116272701 + 8.96 0.000 intron (NM_001308080, intron 5 of 6) HSMAR2|DNA|TcMar-Mariner 16853 NR_162144 113219464 NR_162144 MIR12130 - microRNA 12130 ncRNA chr11-7009 chr11 117642601 117642811 + 8.96 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 154510 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr3-8261 chr3 51510245 51510455 + 8.96 0.000 Intergenic AluSz|SINE|Alu -10335 NR_146065 9730 Hs.716623 NM_014703 ENSG00000145041 DCAF1 RIP|VPRBP DDB1 and CUL4 associated factor 1 protein-coding chr9-6944 chr9 98031812 98032022 + 8.96 0.000 Intergenic AluJr|SINE|Alu -24815 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr7-6375 chr7 151198987 151199197 + 8.96 0.000 intron (NM_001304419, intron 5 of 18) (AC)n|Simple_repeat|Simple_repeat 6404 NM_001304419 392843 Hs.649589 NM_001304419 ENSG00000278685 IQCA1L IQCA1P1 IQ motif containing with AAA domain 1 like protein-coding chr11-7149 chr11 127074101 127074311 + 8.96 0.000 intron (NR_120578, intron 1 of 2) intron (NR_120578, intron 1 of 2) 7204 NR_120578 101929473 Hs.737523 NR_120578 ENSG00000255087 LOC101929473 - uncharacterized LOC101929473 ncRNA chr1-9703 chr1 51985514 51985724 + 8.96 0.000 intron (NM_002867, intron 1 of 4) MIRc|SINE|MIR 5081 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chrX-1954 chrX 7376144 7376354 + 8.96 0.000 Intergenic MER52A|LTR|ERV1 123776 NM_001320754 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chrX-1642 chrX 129946642 129946852 + 8.96 0.000 Intergenic AluSc|SINE|Alu 40583 NM_006649 10813 Hs.458598 NM_006649 ENSG00000156697 UTP14A NYCO16|SDCCAG16|Utp14|dJ537K23.3 UTP14A small subunit processome component protein-coding chr1-6959 chr1 158140848 158141058 + 8.96 0.000 promoter-TSS (NR_033946) promoter-TSS (NR_033946) -313 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr14-2825 chr14 23439307 23439517 + 8.96 0.000 Intergenic Intergenic -3752 NM_000257 4625 Hs.719946 NM_000257 ENSG00000092054 MYH7 CMD1S|CMH1|MPD1|MYHCB|SPMD|SPMM myosin heavy chain 7 protein-coding chr11-6994 chr11 116986905 116987115 + 8.96 0.000 intron (NM_001366687, intron 1 of 4) L1MB2|LINE|L1 111418 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr4-3254 chr4 87093646 87093856 + 8.96 0.000 intron (NM_005935, intron 6 of 19) intron (NM_005935, intron 6 of 19) 86750 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr9-3354 chr9 112813300 112813510 + 8.96 0.000 intron (NM_001012994, intron 2 of 8) AluJr|SINE|Alu 62645 NM_001012994 401548 Hs.522350 NM_001012994 ENSG00000148158 SNX30 ATG24A sorting nexin family member 30 protein-coding chr12-7504 chr12 68040642 68040852 + 8.96 0.000 Intergenic Intergenic 51302 NR_104125 100885789 Hs.439832 NR_104124 ENSG00000255733 IFNG-AS1 GS1-410F4.2|NEST|Tmevpg1 IFNG antisense RNA 1 ncRNA chr7-6407 chr7 155118787 155118997 + 8.96 0.000 Intergenic Intergenic -47335 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chrX-1600 chrX 95315197 95315407 + 8.96 0.000 Intergenic L1PA17|LINE|L1 -252076 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr3-8409 chr3 105933887 105934097 + 8.96 0.000 Intergenic Intergenic -64591 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr15-1574 chr15 72868998 72869208 + 8.96 0.000 Intergenic Intergenic -85345 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr1-10012 chr1 85984127 85984337 + 8.96 0.000 intron (NM_152890, intron 20 of 59) L2c|LINE|L2 172239 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr5-7663 chr5 53799182 53799392 + 8.96 0.000 intron (NR_147168, intron 1 of 3) intron (NR_147168, intron 1 of 3) 20395 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr12-2728 chr12 6001633 6001843 + 8.96 0.000 intron (NM_000552, intron 34 of 51) L1MC4a|LINE|L1 38445 NR_145989 109729112 NR_145989 SNORA120 - small nucleolar RNA, H/ACA box 120 snoRNA chr9-8790 chr9 134210862 134211072 + 8.96 0.000 Intergenic Intergenic -46403 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr8-4526 chr8 122797409 122797619 + 8.96 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 15859 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr16-4406 chr16 50637066 50637276 + 8.96 0.000 3' UTR (NM_033119, exon 10 of 10) 3' UTR (NM_033119, exon 10 of 10) -31684 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr19-6662 chr19 33840571 33840781 + 8.96 0.000 Intergenic Intergenic 43806 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr2-7372 chr2 3198032 3198242 + 8.96 0.000 intron (NM_003310, intron 5 of 8) intron (NM_003310, intron 5 of 8) -72111 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr22-2172 chr22 44449393 44449603 + 8.96 0.000 Intergenic Intergenic 6171 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 - long intergenic non-protein coding RNA 1656 ncRNA chr9-1253 chr9 86947560 86947770 + 8.96 0.000 promoter-TSS (NM_002048) promoter-TSS (NM_002048) -159 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr2-5575 chr2 171991087 171991297 + 8.96 0.000 Intergenic MIR|SINE|MIR -8761 NM_199227 254042 Hs.298250 NM_199227 ENSG00000172878 METAP1D MAP 1D|MAP1D|MetAP 1D|Metap1l methionyl aminopeptidase type 1D, mitochondrial protein-coding chr16-5597 chr16 54160145 54160355 + 8.96 0.000 Intergenic Intergenic 110629 NR_126340 100996338 Hs.232014 NR_126340 LINC02169 - long intergenic non-protein coding RNA 2169 ncRNA chr6-3863 chr6 43970578 43970788 + 8.96 0.000 Intergenic Intergenic -29902 NR_160955 221416 Hs.531926 NM_153246 ENSG00000181577 C6orf223 - chromosome 6 open reading frame 223 ncRNA chrX-4597 chrX 73144620 73144830 + 8.96 0.000 Intergenic L1MA2|LINE|L1 -16645 NR_027291 645996 Hs.617486 NR_027291 ENSG00000204118 NAP1L6 - nucleosome assembly protein 1 like 6 pseudo chr2-9855 chr2 179772493 179772703 + 8.96 0.000 intron (NR_148056, intron 1 of 9) intron (NR_148056, intron 1 of 9) -26088 NM_001352815 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr16-6225 chr16 28620227 28620437 + 8.96 0.000 intron (NM_177536, intron 1 of 5) AluJb|SINE|Alu 3254 NM_177536 6817 Hs.567342 NM_001055 ENSG00000196502 SULT1A1 HAST1/HAST2|P-PST|PST|ST1A1|ST1A3|STP|STP1|TSPST1 sulfotransferase family 1A member 1 protein-coding chr1-6661 chr1 47945035 47945245 + 8.96 0.000 intron (NM_001194986, intron 2 of 6) intron (NM_001194986, intron 2 of 6) 52245 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr11-3860 chr11 76179491 76179701 + 8.96 0.000 Intergenic Intergenic 26906 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr9-4521 chr9 71539949 71540159 + 8.96 0.000 Intergenic MIRb|SINE|MIR -93083 NM_001366144 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr6-2093 chr6 154559462 154559672 + 8.96 0.000 Intergenic Intergenic -48882 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr4-2769 chr4 16093217 16093427 + 8.96 0.000 Intergenic L1M1|LINE|L1 -9299 NM_006017 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chrX-3554 chrX 67614513 67614723 + 8.96 0.000 intron (NM_001011645, intron 2 of 8) L1M4b|LINE|L1 69995 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr7-3667 chr7 45591555 45591765 + 8.96 0.000 intron (NM_001281768, intron 2 of 9) intron (NM_001281768, intron 2 of 9) 17292 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr19-3745 chr19 48418297 48418507 + 8.96 0.000 intron (NM_000836, intron 7 of 12) intron (NM_000836, intron 7 of 12) 23527 NM_000836 2906 Hs.445015 NM_000836 ENSG00000105464 GRIN2D EB11|EIEE46|GluN2D|NMDAR2D|NR2D glutamate ionotropic receptor NMDA type subunit 2D protein-coding chr15-2496 chr15 25703841 25704051 + 8.96 0.000 intron (NM_024490, intron 12 of 20) intron (NM_024490, intron 12 of 20) 144879 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr16-3262 chr16 88050164 88050374 + 8.96 0.000 intron (NM_001173539, intron 11 of 12) AluJb|SINE|Alu 50716 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr2-3880 chr2 40418714 40418924 + 8.96 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 11485 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr6-5697 chr6 122756438 122756648 + 8.96 0.000 intron (NM_001319042, intron 1 of 3) L2|LINE|L2 7342 NM_001319042 2173 Hs.26770 NM_001446 ENSG00000164434 FABP7 B-FABP|BLBP|FABPB|MRG fatty acid binding protein 7 protein-coding chr8-3899 chr8 38888148 38888358 + 8.96 0.000 Intergenic Intergenic -13093 NM_021623 59339 Hs.369123 NM_021623 ENSG00000169499 PLEKHA2 TAPP2 pleckstrin homology domain containing A2 protein-coding chr12-7883 chr12 106301393 106301603 + 8.96 0.000 Intergenic MIR|SINE|MIR -1235 NM_152772 255394 Hs.696047 NM_152772 ENSG00000166046 TCP11L2 - t-complex 11 like 2 protein-coding chr4-5296 chr4 177043087 177043297 + 8.96 0.000 Intergenic Intergenic 167490 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr10-3856 chr10 18418584 18418794 + 8.96 0.000 intron (NM_201593, intron 3 of 13) MER57A1|LTR|ERV1 18114 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr5-2653 chr5 10114207 10114417 + 8.96 0.000 Intergenic LTR16C|LTR|ERVL 135576 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr9-1948 chr9 35882367 35882577 + 8.96 0.000 Intergenic Intergenic -12071 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chr16-4049 chr16 1387217 1387427 + 8.96 0.000 intron (NR_160278, intron 9 of 15) intron (NR_160278, intron 9 of 15) -7670 NM_001276414 64718 Hs.643536 NM_001037125 ENSG00000059145 UNKL C16orf28|ZC3H5L|ZC3HDC5L unk like zinc finger protein-coding chr2-7069 chr2 167677474 167677684 + 8.96 0.000 Intergenic Intergenic -141093 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr22-3258 chr22 45413213 45413423 + 8.96 0.000 promoter-TSS (NM_015653) promoter-TSS (NM_015653) 281 NM_148674 27127 Hs.334176 NM_148674 ENSG00000077935 SMC1B SMC1BETA|SMC1L2 structural maintenance of chromosomes 1B protein-coding chr1-12390 chr1 8577217 8577427 + 8.96 0.000 intron (NM_001042681, intron 4 of 22) (CT)n|Simple_repeat|Simple_repeat -82409 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr2-8118 chr2 79678824 79679034 + 8.96 0.000 intron (NM_001282598, intron 2 of 17) intron (NM_001282598, intron 2 of 17) -29570 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA chr10-8813 chr10 108439468 108439678 + 8.96 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -370280 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr20-3677 chr20 12681377 12681587 + 8.96 0.000 Intergenic Intergenic 255481 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr5-2758 chr5 150161390 150161600 + 8.96 0.000 Intergenic Intergenic -5283 NM_001804 1044 Hs.1545 NM_001804 ENSG00000113722 CDX1 - caudal type homeobox 1 protein-coding chrX-791 chrX 51487693 51487903 + 8.96 0.000 Intergenic Intergenic 8794 NM_018159 55190 Hs.200016 NM_018159 ENSG00000196368 NUDT11 APS1|ASP1|DIPP3b|DIPP3beta|hDIPP3beta nudix hydrolase 11 protein-coding chr3-7776 chr3 72194073 72194283 + 8.96 0.000 Intergenic Intergenic 42921 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr13-2404 chr13 42876053 42876263 + 8.96 0.000 Intergenic MER49|LTR|ERV1 -3414 NR_126388 104355147 Hs.633967 NR_126388 LINC00428 - long intergenic non-protein coding RNA 428 ncRNA chr5-4317 chr5 154159475 154159685 + 8.96 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -31153 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr4-7776 chr4 95386783 95386993 + 8.96 0.000 intron (NM_003728, intron 1 of 15) intron (NM_003728, intron 1 of 15) 162085 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr14-3485 chr14 102371119 102371329 + 8.96 0.000 intron (NM_014844, intron 1 of 19) intron (NM_014844, intron 1 of 19) 8283 NM_014844 9895 Hs.195667 NM_014844 ENSG00000196663 TECPR2 KIAA0329|SPG49 tectonin beta-propeller repeat containing 2 protein-coding chr2-5620 chr2 188425377 188425587 + 8.96 0.000 intron (NM_016315, intron 2 of 11) L1MC5|LINE|L1 127990 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chrX-1859 chrX 113658611 113658821 + 8.96 0.000 intron (NR_131204, intron 1 of 2) L1MEf|LINE|L1 279502 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr3-10851 chr3 167042227 167042437 + 8.96 0.000 Intergenic L1P1|LINE|L1 143649 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr1-11433 chr1 66207648 66207858 + 8.96 0.000 intron (NM_001037340, intron 1 of 14) intron (NM_001037340, intron 1 of 14) -124355 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr3-3714 chr3 178714208 178714418 + 8.96 0.000 intron (NM_001278911, intron 1 of 4) L2c|LINE|L2 146092 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr7-5794 chr7 79878161 79878371 + 8.96 0.000 Intergenic Intergenic -256565 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr17-8331 chr17 73044873 73045083 + 8.96 0.000 intron (NM_001352692, intron 3 of 9) L1ME2|LINE|L1 47710 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr17-2670 chr17 33012763 33012973 + 8.96 0.000 TTS (NM_001094) TTS (NM_001094) 20017 NM_001317225 124912 Hs.434112 NM_173847 ENSG00000141316 SPACA3 ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1 sperm acrosome associated 3 protein-coding chr4-5334 chr4 183119444 183119654 + 8.96 0.000 intron (NM_024949, intron 1 of 22) intron (NM_024949, intron 1 of 22) 20292 NM_024949 80014 Hs.333179 NM_024949 ENSG00000151718 WWC2 BOMB WW and C2 domain containing 2 protein-coding chr13-3236 chr13 29822585 29822795 + 8.96 0.000 intron (NM_007106, intron 1 of 4) AluJr|SINE|Alu 27927 NM_007106 5412 Hs.145575 NM_007106 ENSG00000122042 UBL3 HCG-1|PNSC1 ubiquitin like 3 protein-coding chr17-2160 chr17 45020597 45020807 + 8.96 0.000 Intergenic Intergenic 30930 NM_001288655 79877 Hs.463148 NM_024819 ENSG00000172992 DCAKD - dephospho-CoA kinase domain containing protein-coding chrX-973 chrX 133297216 133297426 + 8.96 0.000 Intergenic Intergenic -78967 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr9-6103 chr9 137797826 137798036 + 8.96 0.000 intron (NM_001354263, intron 16 of 26) intron (NM_001354263, intron 16 of 26) -9525 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr3-6280 chr3 72018722 72018932 + 8.96 0.000 Intergenic MER34A|LTR|ERV1 81628 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr1-7593 chr1 230015910 230016120 + 8.96 0.000 Intergenic Tigger3|DNA|TcMar-Tigger 13298 NR_135116 101927532 Hs.40183 NR_135116 ENSG00000228058 LINC01736 - long intergenic non-protein coding RNA 1736 ncRNA chr19-5077 chr19 51179234 51179444 + 8.96 0.000 intron (NR_110732, intron 1 of 4) intron (NR_110732, intron 1 of 4) 2627 NR_110732 101928517 Hs.707693 NR_110732 ENSG00000269072 LOC101928517 - uncharacterized LOC101928517 ncRNA chr4-3875 chr4 139826256 139826466 + 8.96 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 160542 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr14-3284 chr14 83440483 83440693 + 8.96 0.000 Intergenic THE1B|LTR|ERVL-MaLR 797956 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chrX-3446 chrX 23136437 23136647 + 8.96 0.000 intron (NR_073010, intron 2 of 11) LTR80A|LTR|ERVL 136582 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr11-10227 chr11 99052947 99053157 + 8.96 0.000 intron (NM_001243270, intron 1 of 23) intron (NM_001243270, intron 1 of 23) 32103 NM_001243270 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr8-4810 chr8 13956096 13956306 + 8.96 0.000 Intergenic L1PA13|LINE|L1 326511 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr10-4531 chr10 95514275 95514485 + 8.96 0.000 intron (NM_001290295, intron 1 of 24) intron (NM_001290295, intron 1 of 24) 46991 NM_001290295 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr10-5732 chr10 101556342 101556552 + 8.96 0.000 3' UTR (NM_033637, exon 15 of 15) 3' UTR (NM_033637, exon 15 of 15) 31810 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr17-7035 chr17 60320482 60320692 + 8.96 0.000 intron (NM_032582, intron 2 of 33) MER6A|DNA|TcMar-Tigger 71546 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr13-1954 chr13 102529976 102530186 + 8.96 0.000 Intergenic Intergenic -66905 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr12-7513 chr12 68664931 68665141 + 8.96 0.000 3' UTR (NM_001251917, exon 6 of 6) 3' UTR (NM_001251917, exon 6 of 6) 21823 NR_038930 100507250 Hs.600731 NR_038930 ENSG00000247363 LOC100507250 - uncharacterized LOC100507250 ncRNA chr4-6030 chr4 1995754 1995964 + 8.96 0.000 intron (NM_005663, intron 1 of 10) L1M5|LINE|L1 -9382 NR_030641 100126332 NR_030641 ENSG00000284587 MIR943 MIRN943|hsa-mir-943 microRNA 943 ncRNA chr10-2377 chr10 101742556 101742766 + 8.96 0.000 Intergenic AluJb|SINE|Alu 33453 NM_033163 2253 Hs.57710 NM_006119 ENSG00000107831 FGF8 AIGF|FGF-8|HBGF-8|HH6|KAL6 fibroblast growth factor 8 protein-coding chr17-5404 chr17 33768781 33768991 + 8.96 0.000 intron (NM_001094, intron 1 of 9) LTR28B|LTR|ERV1 -235126 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chrX-1006 chrX 41313021 41313231 + 8.96 0.000 Intergenic Intergenic -20182 NR_126093 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr6-5868 chr6 38366863 38367073 + 8.96 0.000 intron (NM_052893, intron 7 of 11) intron (NM_052893, intron 7 of 11) -114628 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr8-3658 chr8 13414177 13414387 + 8.96 0.000 intron (NM_024767, intron 2 of 4) intron (NM_024767, intron 2 of 4) 100569 NM_182643 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr3-2653 chr3 19965282 19965492 + 8.96 0.000 intron (NM_001292048, intron 2 of 5) AluJr|SINE|Alu 18290 NM_004162 5868 Hs.475663 NM_004162 ENSG00000144566 RAB5A RAB5 RAB5A, member RAS oncogene family protein-coding chr3-4361 chr3 185460765 185460975 + 8.96 0.000 intron (NM_004721, intron 7 of 13) intron (NM_004721, intron 7 of 13) 38165 NM_080652 90407 Hs.677570 NM_080652 ENSG00000163900 TMEM41A 2900010K02Rik transmembrane protein 41A protein-coding chr6-7447 chr6 55497166 55497376 + 8.96 0.000 intron (NM_001287753, intron 3 of 5) MIRb|SINE|MIR 81943 NR_109867 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr3-5205 chr3 74875785 74875995 + 8.96 0.000 Intergenic HERV17-int|LTR|ERV1 -338586 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr10-4386 chr10 47097871 47098081 + 8.96 0.000 Intergenic Intergenic 186254 NM_001352533 26095 Hs.440733 NM_015605 ENSG00000204179 PTPN20 CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 protein tyrosine phosphatase non-receptor type 20 protein-coding chr6-5989 chr6 95471581 95471791 + 8.96 0.000 Intergenic L1PA6|LINE|L1 105765 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr11-9125 chr11 33313118 33313328 + 8.96 0.000 intron (NM_001278162, intron 2 of 15) L1MC4|LINE|L1 54892 NM_001278162 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr12-7252 chr12 51979338 51979548 + 8.96 0.000 intron (NM_004302, intron 3 of 8) AluSx1|SINE|Alu 26063 NM_020327 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr5-7904 chr5 76366756 76366966 + 8.96 0.000 Intergenic Intergenic -36424 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr22-2493 chr22 22155477 22155687 + 8.96 0.000 Intergenic Intergenic -89204 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr15-1771 chr15 69943188 69943398 + 8.96 0.000 Intergenic Intergenic 108059 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr14-1933 chr14 22389206 22389416 + 8.96 0.000 intron (NR_148361, intron 2 of 4) intron (NR_148361, intron 2 of 4) 43442 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr4-1611 chr4 53702378 53702588 + 8.96 0.000 intron (NR_125918, intron 1 of 2) intron (NR_125918, intron 1 of 2) 6582 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr2-3954 chr2 66199673 66199883 + 8.96 0.000 Intergenic MIRb|SINE|MIR 158550 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr1-9381 chr1 30631062 30631272 + 8.96 0.000 Intergenic THE1B|LTR|ERVL-MaLR -87605 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr9-3527 chr9 35478740 35478950 + 8.96 0.000 intron (NR_003581, intron 15 of 17) intron (NR_003581, intron 15 of 17) -11266 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr5-6413 chr5 151142335 151142545 + 8.96 0.000 promoter-TSS (NM_001193544) promoter-TSS (NM_001193544) -756 NM_001193544 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr6-4344 chr6 17712465 17712675 + 8.96 0.000 Intergenic Intergenic 5527 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr9-4423 chr9 8669501 8669711 + 8.96 0.000 intron (NM_130392, intron 1 of 30) intron (NM_130392, intron 1 of 30) 64340 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr13-2212 chr13 23238381 23238591 + 8.96 0.000 intron (NM_000231, intron 3 of 7) L1MEc|LINE|L1 57565 NM_000231 6445 Hs.37167 NM_000231 ENSG00000102683 SGCG 35DAG|A4|DAGA4|DMDA|DMDA1|LGMD2C|LGMDR5|MAM|SCARMD2|SCG3|gamma-SG sarcoglycan gamma protein-coding chrX-4249 chrX 39370696 39370906 + 8.96 0.000 intron (NR_110385, intron 4 of 5) intron (NR_110385, intron 4 of 5) 20973 NR_110385 101927449 Hs.553988 NR_110385 ENSG00000236747 LINC01282 - long intergenic non-protein coding RNA 1282 ncRNA chr12-6414 chr12 78060225 78060435 + 8.96 0.000 intron (NM_001024383, intron 12 of 39) intron (NM_001024383, intron 12 of 39) 229436 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr13-998 chr13 98445934 98446144 + 8.96 0.000 intron (NM_005766, intron 24 of 26) intron (NM_005766, intron 24 of 26) 76086 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr1-11345 chr1 29073109 29073319 + 8.96 0.000 intron (NM_001166007, intron 13 of 17) intron (NM_001166007, intron 13 of 17) 49287 NM_001171868 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr11-5794 chr11 5904601 5904811 + 8.96 0.000 Intergenic L1PB1|LINE|L1 3941 NM_001005166 390082 NM_001005166 ENSG00000277932 OR52E5 OR11-56 olfactory receptor family 52 subfamily E member 5 protein-coding chr2-11187 chr2 155526639 155526849 + 8.96 0.000 Intergenic L1MD|LINE|L1 728187 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr7-7694 chr7 156660916 156661126 + 8.96 0.000 TTS (NM_001308274) TTS (NM_001308274) 17220 NM_001308274 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr20-2535 chr20 35559508 35559718 + 8.96 0.000 non-coding (NR_119376, exon 41 of 43) non-coding (NR_119376, exon 41 of 43) 17535 NM_015966 51614 Hs.472558 NM_015966 ENSG00000125991 ERGIC3 C20orf47|C2orf47|CGI-54|Erv46|NY-BR-84|PRO0989|SDBCAG84|dJ477O4.2 ERGIC and golgi 3 protein-coding chr5-4634 chr5 34411890 34412100 + 8.96 0.000 Intergenic MER4C|LTR|ERV1 -167271 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr3-6606 chr3 126318797 126319007 + 8.96 0.000 Intergenic L1MC1|LINE|L1 38506 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr8-6157 chr8 31811029 31811239 + 8.96 0.000 intron (NM_013962, intron 1 of 4) HAL1ME|LINE|L1 171382 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chrX-5134 chrX 130012737 130012947 + 8.96 0.000 intron (NM_021946, intron 2 of 11) intron (NM_021946, intron 2 of 11) 7654 NM_021946 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr5-1580 chr5 174097762 174097972 + 8.96 0.000 intron (NM_015980, intron 3 of 4) (TG)n|Simple_repeat|Simple_repeat 52161 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr15-3911 chr15 27750137 27750347 + 8.96 0.000 Intergenic Intergenic 349073 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr6-4474 chr6 36200955 36201165 + 8.96 0.000 exon (NM_015695, exon 2 of 13) exon (NM_015695, exon 2 of 13) 4316 NM_015695 27154 Hs.520096 NM_015695 ENSG00000096070 BRPF3 - bromodomain and PHD finger containing 3 protein-coding chr9-4028 chr9 86407949 86408159 + 8.96 0.000 Intergenic AluJb|SINE|Alu -53644 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr10-8432 chr10 85868762 85868972 + 8.96 0.000 intron (NM_017551, intron 6 of 15) intron (NM_017551, intron 6 of 15) 291136 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr17-7052 chr17 62592402 62592612 + 8.96 0.000 intron (NM_001284363, intron 14 of 19) Tigger3b|DNA|TcMar-Tigger -35163 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr13-1369 chr13 94217550 94217760 + 8.96 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) -29664 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chrX-4892 chrX 107246664 107246874 + 8.96 0.000 Intergenic L2b|LINE|L2 40137 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr19-6541 chr19 18856408 18856618 + 8.96 0.000 intron (NM_002911, intron 13 of 23) intron (NM_002911, intron 13 of 23) 24554 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr17-3907 chr17 53189891 53190101 + 8.96 0.000 Intergenic AluSz6|SINE|Alu 204491 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding chr19-2612 chr19 2578199 2578409 + 8.96 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -52411 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr13-2511 chr13 59136297 59136507 + 8.96 0.000 Intergenic Intergenic -876316 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr2-8352 chr2 109379671 109379881 + 8.96 0.000 intron (NM_001099289, intron 3 of 9) intron (NM_001099289, intron 3 of 9) -66151 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr13-2480 chr13 51708699 51708909 + 8.96 0.000 intron (NM_052950, intron 4 of 11) L1MEc|LINE|L1 95358 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr12-8111 chr12 119809081 119809291 + 8.96 0.000 intron (NM_007174, intron 9 of 46) intron (NM_007174, intron 9 of 46) 68134 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr2-3763 chr2 9135975 9136185 + 8.96 0.000 Intergenic Intergenic -70685 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr11-8852 chr11 13021873 13022083 + 8.96 0.000 Intergenic L1M4|LINE|L1 12662 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr4-2682 chr4 1985375 1985585 + 8.96 0.000 TTS (NR_030641) TTS (NR_030641) 997 NR_030641 100126332 NR_030641 ENSG00000284587 MIR943 MIRN943|hsa-mir-943 microRNA 943 ncRNA chr11-10028 chr11 82199560 82199770 + 8.96 0.000 intron (NR_120571, intron 3 of 7) MIR|SINE|MIR 204248 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr18-1219 chr18 40452926 40453136 + 8.96 0.000 Intergenic L2a|LINE|L2 386745 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr15-1883 chr15 68580051 68580261 + 8.96 0.000 intron (NM_006091, intron 1 of 11) MIRc|SINE|MIR 1163 NM_006091 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr2-11608 chr2 3070679 3070889 + 8.96 0.000 intron (NR_110228, intron 3 of 6) intron (NR_110228, intron 3 of 6) 55242 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr19-4286 chr19 699140 699350 + 8.96 0.000 Intergenic L3|LINE|CR1 -3793 NM_214710 400668 Hs.245146 NM_214710 ENSG00000185198 PRSS57 NSP4|PRSSL1|UNQ782 serine protease 57 protein-coding chr7-5627 chr7 54261203 54261413 + 8.96 0.000 Intergenic MSTA|LTR|ERVL-MaLR -69389 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr17-3924 chr17 57985614 57985824 + 8.96 0.000 intron (NM_001330393, intron 1 of 6) intron (NM_001330393, intron 1 of 6) 2535 NM_001330393 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding chr7-4360 chr7 55075217 55075427 + 8.96 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -34517 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chrX-3677 chrX 104819948 104820158 + 8.96 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 253854 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr17-7675 chr17 30672972 30673182 + 8.96 0.000 Intergenic AluSp|SINE|Alu -36531 NR_144393 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr17-6083 chr17 80346215 80346425 + 8.96 0.000 exon (NM_001256071, exon 29 of 68) exon (NM_001256071, exon 29 of 68) -68847 NM_001164637 284131 Hs.389678 NM_173627 ENSG00000173818 ENDOV - endonuclease V protein-coding chr11-5596 chr11 111659153 111659363 + 8.96 0.000 intron (NM_015191, intron 3 of 14) intron (NM_015191, intron 3 of 14) 56809 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr19-4442 chr19 4429464 4429674 + 8.96 0.000 exon (NM_005483, exon 9 of 15) exon (NM_005483, exon 9 of 15) -16409 NR_039901 100616371 NR_039901 ENSG00000266437 MIR4746 mir-4746 microRNA 4746 ncRNA chr7-8641 chr7 70571685 70571895 + 8.96 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -560354 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr4-3825 chr4 120946614 120946824 + 8.96 0.000 Intergenic L1PA7|LINE|L1 -23853 NM_001300823 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr15-1904 chr15 77754919 77755129 + 8.96 0.000 intron (NM_001301186, intron 2 of 5) intron (NM_001301186, intron 2 of 5) 32025 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr2-4949 chr2 176419664 176419874 + 8.96 0.000 Intergenic Intergenic 150327 NM_001006635 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr4-8108 chr4 125739700 125739910 + 8.96 0.000 Intergenic Intergenic 232546 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr11-7065 chr11 120739283 120739493 + 8.96 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 79727 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr20-4390 chr20 58089632 58089842 + 8.96 0.000 Intergenic Intergenic -61165 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr5-3218 chr5 89265605 89265815 + 8.96 0.000 intron (NR_136219, intron 7 of 9) intron (NR_136219, intron 7 of 9) -361605 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr3-10811 chr3 161613803 161614013 + 8.96 0.000 Intergenic THE1C|LTR|ERVL-MaLR 117100 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr1-14709 chr1 64368243 64368453 + 8.96 0.000 Intergenic Intergenic -101781 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr7-5589 chr7 48580968 48581178 + 8.96 0.000 intron (NM_152701, intron 56 of 61) intron (NM_152701, intron 56 of 61) -343474 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr12-4547 chr12 27237382 27237592 + 8.96 0.000 Intergenic Intergenic -6799 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr3-8970 chr3 15561836 15562046 + 8.96 0.000 intron (NM_001284413, intron 15 of 15) AluSz6|SINE|Alu -39411 NM_001281723 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr4-1915 chr4 52737716 52737926 + 8.96 0.000 Intergenic L2b|LINE|L2 13604 NM_001242690 100288413 Hs.363087 NM_024534 ENSG00000226887 ERVMER34-1 HEMO|envMER34 endogenous retrovirus group MER34 member 1, envelope protein-coding chr8-3719 chr8 20740454 20740664 + 8.96 0.000 Intergenic Intergenic -125633 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr22-749 chr22 21982810 21983020 + 8.96 0.000 promoter-TSS (NM_001349850) promoter-TSS (NM_001349850) -128 NM_001349848 8940 Hs.436401 NM_003935 ENSG00000100038 TOP3B TOP3B1 DNA topoisomerase III beta protein-coding chr6-6481 chr6 112637029 112637239 + 8.96 0.000 Intergenic L2|LINE|L2 289804 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr3-4276 chr3 152299271 152299481 + 8.96 0.000 promoter-TSS (NM_207293) promoter-TSS (NM_207293) -29 NM_207295 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding chr9-6778 chr9 27373016 27373226 + 8.96 0.000 intron (NM_024761, intron 2 of 3) intron (NM_024761, intron 2 of 3) -75971 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chr16-5606 chr16 57077504 57077714 + 8.96 0.000 intron (NM_001330552, intron 40 of 47) intron (NM_001330552, intron 40 of 47) -14974 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chrX-5193 chrX 134207226 134207436 + 8.96 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -29882 NM_001101357 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr8-2744 chr8 103796855 103797065 + 8.96 0.000 intron (NM_001348497, intron 3 of 22) L2a|LINE|L2 -22260 NM_001348501 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr18-3195 chr18 46053361 46053571 + 8.96 0.000 intron (NM_024430, intron 1 of 14) intron (NM_024430, intron 1 of 14) 18794 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr15-4158 chr15 90296456 90296666 + 8.96 0.000 Intergenic Intergenic -30802 NR_102428 10519 Hs.715556 NM_006384 ENSG00000185043 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 protein-coding chr5-7126 chr5 730933 731143 + 8.96 0.000 intron (NM_001351303, intron 8 of 10) intron (NM_001351303, intron 8 of 10) 35881 NM_001351303 653082 NM_001351303 ENSG00000206077 ZDHHC11B DHHC-11B zinc finger DHHC-type containing 11B protein-coding chr14-4290 chr14 20603681 20603891 + 8.96 0.000 intron (NR_122043, intron 4 of 4) HERVL18-int|LTR|ERVL -12963 NM_001024822 493901 Hs.729466 NM_001024822 ENSG00000258436 RNASE12 HEL-S-85p|RAI1 ribonuclease A family member 12 (inactive) protein-coding chr12-5669 chr12 92570386 92570596 + 8.96 0.000 Intergenic Intergenic 103812 NR_144532 100507616 Hs.339918 NR_144532 LINC02397 - long intergenic non-protein coding RNA 2397 ncRNA chr9-7768 chr9 77532205 77532415 + 8.96 0.000 intron (NM_004297, intron 1 of 6) intron (NM_004297, intron 1 of 6) 84661 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr11-8431 chr11 108788235 108788445 + 8.96 0.000 intron (NM_004398, intron 13 of 17) L1PA16|LINE|L1 123271 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr2-13924 chr2 183137509 183137719 + 8.96 0.000 intron (NR_109856, intron 4 of 7) intron (NR_109856, intron 4 of 7) 13171 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr13-1714 chr13 94129530 94129740 + 8.96 0.000 intron (NM_005708, intron 4 of 8) LTR33A|LTR|ERVL 58356 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr4-5022 chr4 139715114 139715324 + 8.96 0.000 intron (NM_001204367, intron 4 of 4) MER41-int|LTR|ERV1 49400 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr7-3342 chr7 76281740 76281950 + 8.96 0.000 intron (NM_001110199, intron 12 of 14) CpG-26062 -20828 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr13-3456 chr13 110416848 110417058 + 8.96 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 46334 NM_001267044 100129836 Hs.640035 NM_001267044 COL4A2-AS2 - COL4A2 antisense 2 protein-coding chr11-6112 chr11 36842413 36842623 + 8.96 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -244239 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr11-7450 chr11 122163526 122163736 + 8.96 0.000 intron (NR_024430, intron 2 of 3) intron (NR_024430, intron 2 of 3) -6518 NR_137186 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr5-3408 chr5 146516273 146516483 + 8.96 0.000 promoter-TSS (NM_194251) promoter-TSS (NM_194251) -265 NM_194251 134391 Hs.483732 NM_194251 ENSG00000173250 GPR151 GALR4|GALRL|GPCR|GPCR-2037|PGR7 G protein-coupled receptor 151 protein-coding chr9-7677 chr9 70266032 70266242 + 8.96 0.000 intron (NM_015110, intron 2 of 24) L1MEd|LINE|L1 7159 NM_015110 23137 Hs.534189 NM_015110 ENSG00000198887 SMC5 SMC5L1 structural maintenance of chromosomes 5 protein-coding chr7-5461 chr7 40720484 40720694 + 8.96 0.000 intron (NM_024728, intron 13 of 14) intron (NM_024728, intron 13 of 14) 259350 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr14-3098 chr14 64740405 64740615 + 8.96 0.000 intron (NM_001308147, intron 15 of 16) intron (NM_001308147, intron 15 of 16) 36086 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chrX-2380 chrX 69391985 69392195 + 8.96 0.000 Intergenic Intergenic -113145 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr11-8710 chr11 6393837 6394047 + 8.96 0.000 exon (NM_001007593, exon 5 of 6) exon (NM_001007593, exon 5 of 6) 3468 NR_027400 6609 Hs.498173 NM_000543 ENSG00000166311 SMPD1 ASM|ASMASE|NPD sphingomyelin phosphodiesterase 1 protein-coding chr6-7743 chr6 91347581 91347791 + 8.96 0.000 Intergenic Intergenic -173974 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr3-10816 chr3 162801538 162801748 + 8.96 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 501658 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr6-5001 chr6 108661516 108661726 + 8.96 0.000 intron (NM_201559, intron 2 of 3) MIRc|SINE|MIR -90033 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chrX-4107 chrX 24566540 24566750 + 8.96 0.000 intron (NM_004845, intron 7 of 7) intron (NM_004845, intron 7 of 7) 80702 NM_001163265 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr10-7446 chr10 7039712 7039922 + 8.96 0.000 Intergenic L2b|LINE|L2 146967 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr21-1080 chr21 32426551 32426761 + 8.96 0.000 intron (NM_001320744, intron 1 of 5) intron (NM_001320744, intron 1 of 5) 13950 NM_001320744 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr17-3079 chr17 82070941 82071151 + 8.96 0.000 Intergenic AluJr|SINE|Alu -5242 NM_022156 64118 Hs.514599 NM_022156 ENSG00000169718 DUS1L DUS1|PP3111 dihydrouridine synthase 1 like protein-coding chr11-2551 chr11 91436276 91436486 + 8.96 0.000 Intergenic Intergenic -567179 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chrX-2652 chrX 113515069 113515279 + 8.96 0.000 intron (NR_110399, intron 3 of 3) intron (NR_110399, intron 3 of 3) 423044 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chrX-3901 chrX 8189381 8189591 + 8.96 0.000 Intergenic L2c|LINE|L2 -18219 NM_016378 51480 Hs.279737 NM_016378 ENSG00000177504 VCX2 VCX-2r|VCX2R|VCXB variable charge X-linked 2 protein-coding chr6-2050 chr6 88414049 88414259 + 8.96 0.000 Intergenic L1ME3A|LINE|L1 125215 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr5-3482 chr5 171818545 171818755 + 8.96 0.000 Intergenic HERV16-int|LTR|ERVL 32778 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr8-6949 chr8 105280256 105280466 + 8.96 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -38077 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr14-2076 chr14 69499420 69499630 + 8.96 0.000 intron (NM_001161498, intron 1 of 12) intron (NM_001161498, intron 1 of 12) 14797 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr3-11229 chr3 195541149 195541359 + 8.96 0.000 intron (NR_133014, intron 1 of 4) intron (NR_133014, intron 1 of 4) 2071 NM_001291505 5504 Hs.535731 NM_006241 ENSG00000184203 PPP1R2 IPP-2|IPP2|PPP1R2A protein phosphatase 1 regulatory inhibitor subunit 2 protein-coding chr11-7593 chr11 40513467 40513677 + 8.96 0.000 intron (NM_020929, intron 2 of 4) L2c|LINE|L2 -220442 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr7-8073 chr7 24409770 24409980 + 8.96 0.000 Intergenic MER5A1|DNA|hAT-Charlie 125685 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr16-6453 chr16 57099919 57100129 + 8.96 0.000 intron (NM_152727, intron 1 of 15) AluSc|SINE|Alu 7441 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chrX-1293 chrX 117252698 117252908 + 8.96 0.000 Intergenic L1PA7|LINE|L1 -434943 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr9-5238 chr9 77614765 77614975 + 8.96 0.000 intron (NM_004297, intron 1 of 6) intron (NM_004297, intron 1 of 6) 33452 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr7-5562 chr7 47132602 47132812 + 8.96 0.000 Intergenic L1MD2|LINE|L1 332096 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr11-10160 chr11 93105869 93106079 + 8.96 0.000 Intergenic Harlequin-int|LTR|ERV1 91452 NM_001286139 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr11-6610 chr11 73651615 73651825 + 8.96 0.000 intron (NM_001130036, intron 2 of 5) intron (NM_001130036, intron 2 of 5) 2807 NM_001130036 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr11-7198 chr11 131756703 131756913 + 8.96 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -93252 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr11-6275 chr11 59349995 59350205 + 8.96 0.000 Intergenic L1PA3|LINE|L1 -14359 NM_001004729 390195 Hs.553755 NM_001004729 ENSG00000176495 OR5AN1 OR11-244 olfactory receptor family 5 subfamily AN member 1 protein-coding chr5-1729 chr5 149271506 149271716 + 8.96 0.000 promoter-TSS (NM_001146337) promoter-TSS (NM_001146337) -227 NM_001323063 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr8-3934 chr8 42683195 42683405 + 8.96 0.000 Intergenic MER5A|DNA|hAT-Charlie -14066 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr17-3303 chr17 60171458 60171668 + 8.96 0.000 intron (NR_137422, intron 9 of 11) intron (NR_137422, intron 9 of 11) 21590 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr19-4540 chr19 9727257 9727467 + 8.96 0.000 Intergenic HERVE_a-int|LTR|ERV1 -26586 NR_146444 729648 Hs.626848 NM_001199814 ZNF812P ZNF812 zinc finger protein 812, pseudogene pseudo chr1-16252 chr1 211510553 211510763 + 8.96 0.000 Intergenic AluSx1|SINE|Alu -17741 NM_183059 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr7-9305 chr7 127845416 127845626 + 8.96 0.000 intron (NM_014390, intron 12 of 23) L4_A_Mam|LINE|RTE-X -151988 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr5-7391 chr5 23315824 23316034 + 8.96 0.000 Intergenic Intergenic -191680 NM_020227 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding chr6-6361 chr6 64107636 64107846 + 8.96 0.000 intron (NM_001292009, intron 31 of 43) L1MCa|LINE|L1 300905 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr13-1197 chr13 49248609 49248819 + 8.96 0.000 promoter-TSS (NR_135318) promoter-TSS (NR_135318) 789 NM_030911 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr20-946 chr20 32025885 32026095 + 8.96 0.000 intron (NM_001365692, intron 7 of 9) intron (NM_001365692, intron 7 of 9) 15552 NM_001365692 140706 Hs.382151 NM_080625 ENSG00000101331 CCM2L C20orf160|dJ310O13.5 CCM2 like scaffold protein protein-coding chr3-8851 chr3 9566726 9566936 + 8.96 0.000 Intergenic L1MB4|LINE|L1 -13009 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr3-6587 chr3 124860861 124861071 + 8.96 0.000 intron (NM_001354766, intron 2 of 13) AluJb|SINE|Alu 26399 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr2-11539 chr2 240648729 240648939 + 8.96 0.000 Intergenic LTR45C|LTR|ERV1 23589 NM_005301 2859 Hs.112218 NM_005301 ENSG00000178623 GPR35 - G protein-coupled receptor 35 protein-coding chrX-4148 chrX 30304843 30305053 + 8.96 0.000 intron (NM_000475, intron 1 of 1) intron (NM_000475, intron 1 of 1) 4442 NM_000475 190 Hs.268490 NM_000475 ENSG00000169297 NR0B1 AHC|AHCH|AHX|DAX-1|DAX1|DSS|GTD|HHG|NROB1|SRXY2 nuclear receptor subfamily 0 group B member 1 protein-coding chr7-8100 chr7 25890924 25891134 + 8.96 0.000 Intergenic Intergenic 58957 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr5-6582 chr5 26264924 26265134 + 8.96 0.000 Intergenic AluSx3|SINE|Alu 773557 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr1-8688 chr1 219927858 219928068 + 8.96 0.000 non-coding (NR_046437, exon 1 of 4) non-coding (NR_046437, exon 1 of 4) 688 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr9-2457 chr9 22881692 22881902 + 8.96 0.000 Intergenic AluY|SINE|Alu 235597 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr13-1757 chr13 111204444 111204654 + 8.96 0.000 intron (NM_001320853, intron 1 of 19) intron (NM_001320853, intron 1 of 19) 1489 NM_001320853 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr12-5306 chr12 111818126 111818336 + 8.96 0.000 TTS (NM_001204889) TTS (NM_001204889) 18397 NR_106819 102465456 NR_106819 ENSG00000274697 MIR6761 hsa-mir-6761 microRNA 6761 ncRNA chr2-8913 chr2 181471845 181472055 + 8.96 0.000 intron (NM_000885, intron 2 of 27) intron (NM_000885, intron 2 of 27) 14564 NM_000885 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr2-6842 chr2 70204330 70204540 + 8.96 0.000 Intergenic HERVL18-int|LTR|ERVL -13416 NM_001348761 54980 Hs.720049 NM_017880 ENSG00000115998 C2orf42 - chromosome 2 open reading frame 42 protein-coding chr4-4883 chr4 117002483 117002693 + 8.96 0.000 Intergenic THE1B|LTR|ERVL-MaLR 82988 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr14-4173 chr14 80820824 80821034 + 8.96 0.000 intron (NM_152446, intron 13 of 24) intron (NM_152446, intron 13 of 24) 120809 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr2-8513 chr2 129351476 129351686 + 8.96 0.000 Intergenic Intergenic -77690 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr10-7866 chr10 47423613 47423823 + 8.96 0.000 Intergenic ERV24B_Prim-int|LTR|ERV1 -9243 NR_134499 105378292 Hs.131331 NR_134499 LOC105378292 - uncharacterized LOC105378292 ncRNA chr22-3457 chr22 42550218 42550428 + 8.96 0.000 Intergenic Intergenic -3633 NM_001284334 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr4-8408 chr4 152081474 152081684 + 8.96 0.000 Intergenic THE1B|LTR|ERVL-MaLR -19174 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr2-7912 chr2 57664084 57664294 + 8.96 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -243462 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chrX-522 chrX 40845697 40845907 + 8.96 0.000 Intergenic Intergenic -12606 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo chr1-7997 chr1 209198661 209198871 + 8.96 0.000 Intergenic Intergenic -126690 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr7-4428 chr7 107828093 107828303 + 8.96 0.000 Intergenic Intergenic -24965 NM_000111 1811 Hs.1650 NM_000111 ENSG00000091138 SLC26A3 CLD|DRA solute carrier family 26 member 3 protein-coding chr4-4625 chr4 79652389 79652599 + 8.96 0.000 Intergenic Intergenic 159901 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr10-3703 chr10 109027973 109028183 + 8.96 0.000 Intergenic Intergenic 895168 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr11-4081 chr11 26347448 26347658 + 8.96 0.000 intron (NM_031418, intron 1 of 26) intron (NM_031418, intron 1 of 26) 15423 NM_031418 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr9-4857 chr9 2075006 2075216 + 8.96 0.000 intron (NM_001289397, intron 12 of 32) MIR1_Amn|SINE|MIR 53166 NM_001289396 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr3-5423 chr3 169534638 169534848 + 8.96 0.000 intron (NM_001366473, intron 1 of 15) MIR|SINE|MIR 86876 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr2-12404 chr2 55033943 55034153 + 8.96 0.000 intron (NM_001321904, intron 2 of 9) Tigger17a|DNA|TcMar-Tigger 13278 NM_001321863 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr11-10442 chr11 116675440 116675650 + 8.96 0.000 Intergenic L1MA4|LINE|L1 36123 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr17-8149 chr17 59716410 59716620 + 8.96 0.000 intron (NM_001329394, intron 1 of 11) intron (NM_001329394, intron 1 of 11) 8861 NM_001329399 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding chr18-574 chr18 76565413 76565623 + 8.96 0.000 Intergenic Intergenic 36863 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chr2-6823 chr2 61456223 61456433 + 8.96 0.000 intron (NM_014709, intron 1 of 79) intron (NM_014709, intron 1 of 79) 14759 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding chr15-3004 chr15 55534684 55534894 + 8.96 0.000 Intergenic L1PA13|LINE|L1 -26555 NM_001033560 161582 Hs.126403 NM_130810 ENSG00000256061 DNAAF4 CILD25|DYX1|DYX1C1|DYXC1|EKN1|RD dynein axonemal assembly factor 4 protein-coding chr2-9196 chr2 216543316 216543526 + 8.96 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 44577 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr4-2597 chr4 124597330 124597540 + 8.96 0.000 Intergenic Intergenic -39001 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr6-6455 chr6 103820151 103820361 + 8.96 0.000 Intergenic L1MA3|LINE|L1 1039290 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr1-16038 chr1 201077621 201077831 + 8.96 0.000 intron (NM_000069, intron 11 of 43) intron (NM_000069, intron 11 of 43) 34700 NM_000069 779 Hs.1294 NM_000069 ENSG00000081248 CACNA1S CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP calcium voltage-gated channel subunit alpha1 S protein-coding chr9-8147 chr9 102769417 102769627 + 8.96 0.000 Intergenic Intergenic -225811 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr2-7633 chr2 27288507 27288717 + 8.96 0.000 intron (NM_187841, intron 1 of 8) intron (NM_187841, intron 1 of 8) 6183 NM_187841 57159 Hs.516036 NM_032546 ENSG00000138100 TRIM54 MURF|MURF-3|RNF30|muRF3 tripartite motif containing 54 protein-coding chr4-5148 chr4 153893472 153893682 + 8.96 0.000 Intergenic MIRb|SINE|MIR -104494 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr5-4925 chr5 73957625 73957835 + 8.96 0.000 Intergenic Intergenic 144184 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr1-13964 chr1 24812528 24812738 + 8.96 0.000 intron (NM_013943, intron 2 of 5) intron (NM_013943, intron 2 of 5) 67186 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr14-4539 chr14 42026468 42026678 + 8.96 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 419717 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr2-13785 chr2 172282946 172283156 + 8.96 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -144285 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr12-5146 chr12 100388871 100389081 + 8.96 0.000 intron (NM_001145288, intron 2 of 10) L2b|LINE|L2 31902 NM_001145288 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr22-3931 chr22 36918566 36918776 + 8.96 0.000 intron (NM_000395, intron 1 of 13) intron (NM_000395, intron 1 of 13) 5043 NM_000395 1439 Hs.592192 NM_000395 ENSG00000100368 CSF2RB CD131|CDw131|IL3RB|IL5RB|SMDP5|betaGMR colony stimulating factor 2 receptor beta common subunit protein-coding chr16-2260 chr16 1467422 1467632 + 8.96 0.000 intron (NM_001287, intron 1 of 24) intron (NM_001287, intron 1 of 24) 7501 NM_001287 1186 Hs.459649 NM_001287 ENSG00000103249 CLCN7 CLC-7|CLC7|OPTA2|OPTB4|PPP1R63 chloride voltage-gated channel 7 protein-coding chr17-5642 chr17 49885929 49886139 + 8.96 0.000 Intergenic Intergenic -38017 NM_001077506 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr6-4870 chr6 88653907 88654117 + 8.96 0.000 intron (NM_001286428, intron 12 of 13) intron (NM_001286428, intron 12 of 13) -114643 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chrX-2024 chrX 16127422 16127632 + 8.96 0.000 intron (NM_005314, intron 1 of 2) intron (NM_005314, intron 1 of 2) 3962 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr10-5018 chr10 33494882 33495092 + 8.96 0.000 Intergenic Intergenic -160082 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr10-4362 chr10 34629177 34629387 + 8.96 0.000 intron (NM_001184789, intron 2 of 22) intron (NM_001184789, intron 2 of 22) 186014 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr18-1806 chr18 13126918 13127128 + 8.96 0.000 Intergenic Intergenic -91737 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr1-15772 chr1 174628931 174629141 + 8.96 0.000 intron (NM_001366446, intron 13 of 25) intron (NM_001366446, intron 13 of 25) -71503 NM_001366451 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr12-5158 chr12 102021547 102021757 + 8.96 0.000 intron (NM_016053, intron 6 of 6) intron (NM_016053, intron 6 of 6) 40339 NM_016053 51019 Hs.405692 NM_016053 ENSG00000120860 WASHC3 CCDC53|CGI-116 WASH complex subunit 3 protein-coding chr8-4007 chr8 56801229 56801439 + 8.96 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 192533 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr2-6239 chr2 35960862 35961072 + 8.96 0.000 Intergenic L2a|LINE|L2 394603 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr11-7167 chr11 128901078 128901288 + 8.96 0.000 non-coding (NR_045767, exon 4 of 4) non-coding (NR_045767, exon 4 of 4) 4514 NM_145013 219833 Hs.689860 NM_145013 ENSG00000174370 C11orf45 - chromosome 11 open reading frame 45 protein-coding chr15-1770 chr15 69576018 69576228 + 8.96 0.000 Intergenic Intergenic 14403 NR_026979 145837 Hs.410126 NR_026979 DRAIC - downregulated RNA in cancer, inhibitor of cell invasion and migration ncRNA chr21-713 chr21 33404415 33404625 + 8.96 0.000 intron (NM_005534, intron 1 of 6) AluJb|SINE|Alu 1624 NM_005534 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr4-3906 chr4 148359845 148360055 + 8.96 0.000 intron (NM_000901, intron 2 of 8) intron (NM_000901, intron 2 of 8) 82464 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr8-3243 chr8 143214395 143214605 + 8.96 0.000 intron (NM_178172, intron 2 of 3) intron (NM_178172, intron 2 of 3) 1282 NM_001301772 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr6-4412 chr6 27187617 27187827 + 8.96 0.000 Intergenic LTR14|LTR|ERVK 40096 NR_036096 100422934 NR_036096 ENSG00000265565 MIR3143 mir-3143 microRNA 3143 ncRNA chr6-2427 chr6 158793504 158793714 + 8.96 0.000 intron (NM_003379, intron 1 of 12) MER20B|DNA|hAT-Charlie -24370 NR_102425 101409257 Hs.571207 NR_102425 ENSG00000233893 EZR-AS1 - EZR antisense RNA 1 ncRNA chr13-2467 chr13 50493712 50493922 + 8.96 0.000 intron (NR_109974, intron 5 of 6) L2c|LINE|L2 33632 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr14-2653 chr14 69542806 69543016 + 8.96 0.000 Intergenic Intergenic 31960 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr16-2839 chr16 84359497 84359707 + 8.96 0.000 Intergenic Intergenic -8921 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr3-5680 chr3 13433773 13433983 + 8.96 0.000 Intergenic LTR8|LTR|ERV1 -13556 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr10-5666 chr10 98045687 98045897 + 8.96 0.000 Intergenic Intergenic -14964 NM_001206528 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr12-2522 chr12 93802849 93803059 + 8.96 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -65131 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr21-599 chr21 9768064 9768274 + 8.96 0.000 Intergenic Intergenic 52892 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr14-3816 chr14 69779097 69779307 + 8.96 0.000 exon (NM_003049, exon 3 of 5) exon (NM_003049, exon 3 of 5) -11489 NR_029378 100289511 Hs.729250 NR_029378 LOC100289511 - uncharacterized LOC100289511 ncRNA chr10-8772 chr10 104695503 104695713 + 8.96 0.000 intron (NM_014978, intron 1 of 26) L1ME3G|LINE|L1 -29392 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr2-11813 chr2 17300117 17300327 + 8.96 0.000 Intergenic Intergenic 218218 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr10-3941 chr10 97381778 97381988 + 8.96 0.000 intron (NM_001145114, intron 8 of 31) intron (NM_001145114, intron 8 of 31) 19457 NM_015179 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr12-5083 chr12 93913853 93914063 + 8.96 0.000 intron (NR_135017, intron 1 of 2) L1PA16|LINE|L1 29648 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr6-7012 chr6 22300908 22301118 + 8.96 0.000 intron (NM_001163558, intron 1 of 5) intron (NM_001163558, intron 1 of 5) 1822 NM_001163558 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr6-2212 chr6 42268167 42268377 + 8.96 0.000 exon (NM_033502, exon 5 of 18) exon (NM_033502, exon 5 of 18) -50411 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr3-7235 chr3 194820931 194821141 + 8.96 0.000 Intergenic Intergenic -52327 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr16-2679 chr16 72198209 72198419 + 8.96 0.000 Intergenic Intergenic -25864 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr3-6283 chr3 72145447 72145657 + 8.96 0.000 Intergenic Intergenic -5705 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr10-6410 chr10 9873751 9873961 + 8.96 0.000 Intergenic L1MEg|LINE|L1 -184866 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA chr16-1849 chr16 68902060 68902270 + 8.96 0.000 intron (NM_024562, intron 8 of 17) intron (NM_024562, intron 8 of 17) 58634 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr11-2340 chr11 75259937 75260147 + 8.96 0.000 TTS (NM_020251) TTS (NM_020251) 19268 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr17-4051 chr17 78102527 78102737 + 8.96 0.000 intron (NM_018996, intron 19 of 20) intron (NM_018996, intron 19 of 20) 9167 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr15-4823 chr15 73460354 73460564 + 8.96 0.000 intron (NM_001042367, intron 1 of 5) intron (NM_001042367, intron 1 of 5) 17295 NM_001348772 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chr4-3206 chr4 28165888 28166098 + 8.96 0.000 Intergenic L1MA2|LINE|L1 -653589 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr4-4515 chr4 63581146 63581356 + 8.96 0.000 Intergenic LTR27E|LTR|ERV1 828199 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr2-5382 chr2 101463243 101463453 + 8.96 0.000 intron (NM_001367509, intron 2 of 13) intron (NM_001367509, intron 2 of 13) 11764 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr4-7415 chr4 65530743 65530953 + 8.96 0.000 intron (NM_001281767, intron 3 of 16) MLT1J|LTR|ERVL-MaLR 138640 NM_001318761 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr6-4163 chr6 816798 817008 + 8.96 0.000 Intergenic MER74A|LTR|ERVL -51595 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr6-4271 chr6 11203380 11203590 + 8.96 0.000 intron (NM_182966, intron 2 of 2) intron (NM_182966, intron 2 of 2) 29183 NM_006403 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr2-10406 chr2 187884567 187884777 + 8.96 0.000 Intergenic L2c|LINE|L2 -330167 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr20-2112 chr20 32451161 32451371 + 8.96 0.000 intron (NM_001256798, intron 10 of 10) L2|LINE|L2 32224 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr15-2607 chr15 64773103 64773313 + 8.96 0.000 intron (NR_138350, intron 1 of 7) intron (NR_138350, intron 1 of 7) 1535 NR_138363 348093 Hs.436518 NM_194272 ENSG00000166831 RBPMS2 - RNA binding protein, mRNA processing factor 2 protein-coding chr6-5986 chr6 93022314 93022524 + 8.96 0.000 Intergenic Intergenic 397140 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr16-4359 chr16 46639392 46639602 + 8.96 0.000 Intergenic L1ME3Cz|LINE|L1 -18118 NM_001324319 79801 Hs.123253 NM_024745 ENSG00000171241 SHCBP1 PAL SHC binding and spindle associated 1 protein-coding chr20-4239 chr20 48469411 48469621 + 8.96 0.000 Intergenic Intergenic 109605 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr15-4655 chr15 64414197 64414407 + 8.96 0.000 intron (NM_001321924, intron 8 of 12) intron (NM_001321924, intron 8 of 12) 26466 NM_001321924 9325 Hs.500340 NM_016213 ENSG00000103671 TRIP4 ASC-1|ASC1|HsT17391|MDCDC|SMABF1|ZC2HC5 thyroid hormone receptor interactor 4 protein-coding chr11-4127 chr11 43344723 43344933 + 8.96 0.000 TTS (NM_001142930) TTS (NM_001142930) -14057 NM_001307943 55761 Hs.191186 NM_018259 ENSG00000052841 TTC17 - tetratricopeptide repeat domain 17 protein-coding chr20-971 chr20 44215127 44215337 + 8.96 0.000 intron (NR_038337, intron 2 of 2) L2|LINE|L2 4146 NR_038337 100505783 Hs.159049 NR_038337 ENSG00000223891 OSER1-DT OSER1-AS1 OSER1 divergent transcript ncRNA chr2-5113 chr2 19543297 19543507 + 8.96 0.000 Intergenic Intergenic -184779 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr6-6645 chr6 157030563 157030773 + 8.96 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -5759 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr13-1832 chr13 80809103 80809313 + 8.96 0.000 Intergenic L1PA7|LINE|L1 -209183 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA chr4-5953 chr4 159010766 159010976 + 8.96 0.000 intron (NM_152543, intron 1 of 4) L3|LINE|CR1 24358 NM_152543 152940 Hs.415576 NM_152543 ENSG00000164123 C4orf45 - chromosome 4 open reading frame 45 protein-coding chr5-3499 chr5 175550055 175550265 + 8.96 0.000 Intergenic MER57A-int|LTR|ERV1 71600 NM_022754 94081 Hs.369440 NM_022754 ENSG00000164466 SFXN1 SLC56A1|TCC sideroflexin 1 protein-coding chr16-6405 chr16 54778470 54778680 + 8.96 0.000 Intergenic LTR16E1|LTR|ERVL 69658 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr13-2368 chr13 39157046 39157256 + 8.96 0.000 Intergenic AluSq2|SINE|Alu 118695 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr3-2786 chr3 195238741 195238951 + 8.96 0.000 intron (NM_152531, intron 1 of 3) intron (NM_152531, intron 1 of 3) 9074 NM_001308069 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr3-7728 chr3 51889975 51890185 + 8.96 0.000 Intergenic L1MEh|LINE|L1 13273 NM_152397 132141 Hs.671210 NM_152397 ENSG00000173389 IQCF1 - IQ motif containing F1 protein-coding chr9-5504 chr9 104694825 104695035 + 8.96 0.000 exon (NM_001004484, exon 1 of 1) exon (NM_001004484, exon 1 of 1) 508 NM_001004484 286365 Hs.553683 NM_001004484 ENSG00000179055 OR13D1 OR9-15 olfactory receptor family 13 subfamily D member 1 protein-coding chr8-2576 chr8 42471103 42471313 + 8.96 0.000 intron (NM_006749, intron 2 of 10) intron (NM_006749, intron 2 of 10) 30023 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr1-9194 chr1 21633212 21633422 + 8.96 0.000 intron (NM_001350526, intron 5 of 28) L2c|LINE|L2 18581 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr11-9388 chr11 56111235 56111445 + 8.96 0.000 Intergenic Intergenic 6297 NM_001005200 390151 Hs.553744 NM_001005200 ENSG00000181767 OR8H2 OR11-171 olfactory receptor family 8 subfamily H member 2 protein-coding chr14-2487 chr14 100767255 100767465 + 8.96 0.000 Intergenic Intergenic 40468 NM_001317172 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chrX-2780 chrX 131243798 131244008 + 8.96 0.000 Intergenic L1ME3G|LINE|L1 45158 NM_001170963 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr3-3755 chr3 5742657 5742867 + 8.96 0.000 Intergenic Intergenic -492507 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr1-11020 chr1 220906766 220906976 + 8.96 0.000 Intergenic Intergenic -26731 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr20-2416 chr20 22236416 22236626 + 8.96 0.000 Intergenic Intergenic 46280 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chr8-4442 chr8 111888712 111888922 + 8.96 0.000 Intergenic Tigger2|DNA|TcMar-Tigger 512178 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr5-5921 chr5 60724857 60725067 + 8.96 0.000 Intergenic Intergenic -24796 NM_001145208 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr6-2867 chr6 4734315 4734525 + 8.96 0.000 intron (NM_001368125, intron 2 of 8) LTR78B|LTR|ERV1 28282 NM_001368125 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr1-12138 chr1 173335626 173335836 + 8.96 0.000 intron (NR_037845, intron 2 of 2) ERVL-B4-int|LTR|ERVL 125631 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr3-6349 chr3 82834283 82834493 + 8.96 0.000 Intergenic MER70B|LTR|ERVL 848246 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chrX-3241 chrX 70291457 70291667 + 8.96 0.000 intron (NM_012310, intron 3 of 30) intron (NM_012310, intron 3 of 30) 1458 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chr10-8512 chr10 90885466 90885676 + 8.96 0.000 intron (NM_006413, intron 5 of 10) intron (NM_006413, intron 5 of 10) 13597 NM_001104546 10556 Hs.139120 NM_006413 ENSG00000148688 RPP30 TSG15 ribonuclease P/MRP subunit p30 protein-coding chr11-3988 chr11 2452265 2452475 + 8.96 0.000 intron (NM_000218, intron 1 of 15) intron (NM_000218, intron 1 of 15) 7379 NM_000218 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr13-2574 chr13 69061470 69061680 + 8.96 0.000 Intergenic Intergenic -160771 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr1-14701 chr1 63257396 63257606 + 8.96 0.000 intron (NR_038252, intron 4 of 11) intron (NR_038252, intron 4 of 11) 59756 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr9-7642 chr9 41047436 41047646 + 8.96 0.000 intron (NR_002836, intron 3 of 8) intron (NR_002836, intron 3 of 8) 27084 NR_002836 595135 Hs.571593 NR_002836 ENSG00000277778 PGM5P2 - phosphoglucomutase 5 pseudogene 2 pseudo chr15-2189 chr15 88624264 88624474 + 8.96 0.000 intron (NM_022767, intron 1 of 3) intron (NM_022767, intron 1 of 3) 3029 NM_022767 64782 Hs.436102 NM_022767 ENSG00000181026 AEN ISG20L1|pp12744 apoptosis enhancing nuclease protein-coding chr10-7924 chr10 51130120 51130330 + 8.96 0.000 intron (NM_006258, intron 1 of 17) L2|LINE|L2 55738 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr7-2749 chr7 45292822 45293032 + 8.96 0.000 Intergenic Intergenic 135136 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr8-5902 chr8 17145161 17145371 + 8.96 0.000 Intergenic Intergenic -11216 NM_016353 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr2-12737 chr2 83692518 83692728 + 8.96 0.000 Intergenic AluY|SINE|Alu 169809 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr18-1986 chr18 40059319 40059529 + 8.96 0.000 Intergenic Intergenic -6862 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr20-4155 chr20 44209185 44209395 + 8.96 0.000 intron (NM_016470, intron 1 of 3) X8_LINE|LINE|CR1 1481 NM_016470 51526 Hs.75798 NM_016470 ENSG00000132823 OSER1 C20orf111|HSPC207|Osr1|Perit1|dJ1183I21.1 oxidative stress responsive serine rich 1 protein-coding chr12-4725 chr12 51055526 51055736 + 8.96 0.000 intron (NM_001351325, intron 3 of 6) AluJr|SINE|Alu 7304 NM_001351328 25875 Hs.655272 NM_015416 ENSG00000050426 LETMD1 1110019O13Rik|HCCR|HCCR-1|HCCR-2|HCCR1|HCCR2|HCRR-2|SLC55A3 LETM1 domain containing 1 protein-coding chr13-4026 chr13 72478865 72479075 + 8.96 0.000 Intergenic L1MA8|LINE|L1 248659 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr14-2713 chr14 90440101 90440311 + 8.96 0.000 Intergenic Intergenic 14911 NR_146493 101930294 NR_146492 ENSG00000258678 LINC02317 - long intergenic non-protein coding RNA 2317 ncRNA chr1-14193 chr1 34312519 34312729 + 8.96 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 135717 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr16-5303 chr16 69930239 69930449 + 8.96 0.000 intron (NM_199424, intron 3 of 13) intron (NM_199424, intron 3 of 13) -2737 NR_029681 406932 NR_029681 ENSG00000208017 MIR140 MIRN140|miRNA140|mir-140 microRNA 140 ncRNA chr3-10965 chr3 177276373 177276583 + 8.96 0.000 Intergenic Intergenic -17964 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr12-5980 chr12 93391306 93391516 + 8.96 0.000 intron (NM_001301022, intron 1 of 4) AluSx1|SINE|Alu 12833 NM_001301024 11163 Hs.506325 NM_019094 ENSG00000173598 NUDT4 DIPP-2B|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P|NUDT4B nudix hydrolase 4 protein-coding chr12-6158 chr12 6909757 6909967 + 8.96 0.000 intron (NM_001135217, intron 5 of 7) intron (NM_001135217, intron 5 of 7) -4718 NM_001975 2026 Hs.511915 NM_001975 ENSG00000111674 ENO2 HEL-S-279|NSE enolase 2 protein-coding chr8-3339 chr8 38644937 38645147 + 8.96 0.000 Intergenic Intergenic -43785 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr9-3106 chr9 38227267 38227477 + 8.96 0.000 Intergenic Intergenic -158145 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr11-8382 chr11 90940299 90940509 + 8.96 0.000 Intergenic AluSq2|SINE|Alu -71202 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr11-4978 chr11 70816438 70816648 + 8.96 0.000 intron (NM_012309, intron 11 of 24) intron (NM_012309, intron 11 of 24) -46247 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA chr11-9469 chr11 61855320 61855530 + 8.96 0.000 intron (NM_001281502, intron 5 of 11) intron (NM_001281502, intron 5 of 11) 22853 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr3-8842 chr3 9142475 9142685 + 8.96 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -49913 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr18-2892 chr18 10851976 10852186 + 8.96 0.000 intron (NM_022068, intron 7 of 51) intron (NM_022068, intron 7 of 51) -92432 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr9-3403 chr9 132185299 132185509 + 8.96 0.000 intron (NM_032536, intron 2 of 7) intron (NM_032536, intron 2 of 7) 23346 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr12-2382 chr12 26122360 26122570 + 8.96 0.000 exon (NM_030762, exon 5 of 5) exon (NM_030762, exon 5 of 5) 2572 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr17-5108 chr17 5118400 5118610 + 8.96 0.000 intron (NM_001304284, intron 2 of 37) LTR28B|LTR|ERV1 -2057 NM_001320954 7775 Hs.279914 NM_014519 ENSG00000167840 ZNF232 ZSCAN11 zinc finger protein 232 protein-coding chr1-4282 chr1 15407253 15407463 + 8.96 0.000 Intergenic Intergenic -2530 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr20-2432 chr20 24005943 24006153 + 8.96 0.000 Intergenic Intergenic -17269 NM_178311 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr5-1464 chr5 72211188 72211398 + 8.96 0.000 Intergenic Intergenic 31506 NM_001324255 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr2-4360 chr2 3780735 3780945 + 8.96 0.000 intron (NM_001287444, intron 9 of 10) intron (NM_001287444, intron 9 of 10) 73998 NM_001365580 728597 Hs.304233 NM_001287444 ENSG00000214866 DCDC2C - doublecortin domain containing 2C protein-coding chr12-3823 chr12 76285385 76285595 + 8.96 0.000 intron (NR_146531, intron 1 of 3) intron (NR_146531, intron 1 of 3) 25607 NR_146531 105369848 NR_146531 LNCOG LINC02407|lncRNA-OG lncRNA osteogenesis associated ncRNA chr4-4455 chr4 54308988 54309198 + 8.96 0.000 Intergenic Intergenic -23799 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr14-4660 chr14 55089563 55089773 + 8.96 0.000 Intergenic Intergenic 38021 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding chr6-4181 chr6 2208113 2208323 + 8.96 0.000 intron (NM_001500, intron 1 of 10) MLT1J|LTR|ERVL-MaLR -32227 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr1-16323 chr1 217364600 217364810 + 8.96 0.000 Intergenic Intergenic -227003 NM_001350124 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr15-3314 chr15 79155075 79155285 + 8.96 0.000 Intergenic Intergenic -54608 NR_029705 406960 NR_029705 ENSG00000207695 MIR184 EDICT|MIRN184|miR-184 microRNA 184 ncRNA chr10-2704 chr10 102583801 102584011 + 8.96 0.000 intron (NM_001178133, intron 3 of 10) intron (NM_001178133, intron 3 of 10) -60589 NM_030912 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr10-3392 chr10 28935271 28935481 + 8.96 0.000 Intergenic Intergenic 88968 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr6-5299 chr6 141757737 141757947 + 8.96 0.000 Intergenic Intergenic 330957 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr2-9398 chr2 231479000 231479210 + 8.96 0.000 Intergenic L2c|LINE|L2 -14621 NM_005381 4691 Hs.79110 NM_005381 ENSG00000115053 NCL C23|Nsr1 nucleolin protein-coding chr6-7651 chr6 82046465 82046675 + 8.96 0.000 intron (NR_149135, intron 3 of 3) intron (NR_149135, intron 3 of 3) 55195 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr18-2015 chr18 43219836 43220046 + 8.96 0.000 Intergenic MSTC-int|LTR|ERVL-MaLR 57549 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr13-1083 chr13 73575301 73575511 + 8.96 0.000 intron (NR_047009, intron 1 of 2) SVA_F|Retroposon|SVA 11162 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr6-3042 chr6 56840923 56841133 + 8.96 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 2637 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr3-5944 chr3 45313912 45314122 + 8.96 0.000 Intergenic Intergenic -74559 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr6-5318 chr6 143514764 143514974 + 8.96 0.000 Intergenic Intergenic -3149 NM_032020 2519 Hs.17680 NM_032020 ENSG00000001036 FUCA2 dJ20N2.5 alpha-L-fucosidase 2 protein-coding chr3-4902 chr3 185911839 185912049 + 8.96 0.000 Intergenic HAL1|LINE|L1 26070 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr2-4323 chr2 237486982 237487192 + 8.96 0.000 promoter-TSS (NM_001042467) promoter-TSS (NM_001042467) -164 NM_001042467 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr3-10953 chr3 176593131 176593341 + 8.96 0.000 Intergenic Intergenic 42296 NR_109968 100505547 Hs.253350 NR_109968 LINC01208 - long intergenic non-protein coding RNA 1208 ncRNA chr1-6073 chr1 96645129 96645339 + 8.96 0.000 Intergenic Intergenic -76371 NM_021190 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr5-8302 chr5 114988632 114988842 + 8.96 0.000 Intergenic LTR84b|LTR|ERVL 181171 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr12-5296 chr12 111207959 111208169 + 8.96 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) -96078 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr3-6551 chr3 120364676 120364886 + 8.96 0.000 Intergenic MLT2B4|LTR|ERVL -15427 NM_001099678 116064 Hs.518084 NM_001099678 ENSG00000163428 LRRC58 - leucine rich repeat containing 58 protein-coding chr1-7640 chr1 6085518 6085728 + 8.96 0.000 intron (NM_001199863, intron 5 of 13) intron (NM_001199863, intron 5 of 13) 39735 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr5-4916 chr5 73124227 73124437 + 8.96 0.000 intron (NM_173490, intron 2 of 3) intron (NM_173490, intron 2 of 3) 3757 NM_173490 134285 Hs.162246 NM_173490 ENSG00000157111 TMEM171 PRP2 transmembrane protein 171 protein-coding chr6-3749 chr6 10840537 10840747 + 8.96 0.000 Intergenic Intergenic -2087 NM_001242385 4117 Hs.446125 NM_005906 ENSG00000111837 MAK RP62 male germ cell associated kinase protein-coding chr2-5532 chr2 158487589 158487799 + 8.96 0.000 intron (NM_001005476, intron 1 of 20) intron (NM_001005476, intron 1 of 20) 30742 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr16-3608 chr16 81601019 81601229 + 8.96 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) -10224 NR_106759 102465251 NR_106759 ENSG00000275109 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA chr1-2739 chr1 26161785 26161995 + 8.96 0.000 exon (NM_024869, exon 2 of 2) exon (NM_024869, exon 2 of 2) 2811 NM_024869 79927 Hs.694119 NM_024869 ENSG00000197245 FAM110D GRRP1 family with sequence similarity 110 member D protein-coding chr1-9359 chr1 29386772 29386982 + 8.96 0.000 Intergenic Intergenic -36763 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr21-892 chr21 10726786 10726996 + 8.96 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 205377 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr1-8432 chr1 93811208 93811418 + 8.96 0.000 intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) -35519 NR_030621 100126348 NR_030621 ENSG00000211575 MIR760 MIRN760|hsa-mir-760|mir-760 microRNA 760 ncRNA chr19-4594 chr19 12691384 12691594 + 8.96 0.000 intron (NM_032301, intron 3 of 9) intron (NM_032301, intron 3 of 9) 3491 NM_001316692 105372280 Hs.535131 NM_001316692 ENSG00000283980 GNG14 - G protein subunit gamma 14 protein-coding chr4-8613 chr4 172166231 172166441 + 8.96 0.000 intron (NM_001034845, intron 2 of 12) AluSg|SINE|Alu -352729 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr3-3366 chr3 43632298 43632508 + 8.96 0.000 intron (NM_001346469, intron 1 of 11) LTR33|LTR|ERVL -10326 NM_001204831 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr11-10553 chr11 120951717 120951927 + 8.96 0.000 intron (NR_133004, intron 1 of 2) Charlie8|DNA|hAT-Charlie 6217 NR_133004 101929208 Hs.662310 NR_133004 LOC101929208 - uncharacterized LOC101929208 ncRNA chr8-2801 chr8 123496395 123496605 + 8.96 0.000 Intergenic MIR|SINE|MIR 35643 NM_148177 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr13-3103 chr13 53487008 53487218 + 8.96 0.000 Intergenic Intergenic -328306 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr10-4692 chr10 132713703 132713913 + 8.96 0.000 intron (NM_005539, intron 8 of 15) intron (NM_005539, intron 8 of 15) 32533 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr5-2618 chr5 146042662 146042872 + 8.96 0.000 intron (NM_152550, intron 5 of 9) intron (NM_152550, intron 5 of 9) 62810 NM_001029869 153770 Hs.162369 NM_001029869 ENSG00000173261 PLAC8L1 - PLAC8 like 1 protein-coding chr3-6515 chr3 114093731 114093941 + 8.96 0.000 Intergenic Intergenic 37099 NM_001256835 79691 Hs.477162 NM_024638 ENSG00000151576 QTRT2 QTRTD1 queuine tRNA-ribosyltransferase accessory subunit 2 protein-coding chr17-1489 chr17 8383454 8383664 + 8.96 0.000 promoter-TSS (NM_001315530) promoter-TSS (NM_001315530) -366 NM_001315531 6154 Hs.482144 NM_000987 ENSG00000161970 RPL26 DBA11|L26 ribosomal protein L26 protein-coding chr18-2070 chr18 48303939 48304149 + 8.96 0.000 intron (NM_001371290, intron 5 of 9) MIR|SINE|MIR 51743 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr9-5062 chr9 33333500 33333710 + 8.96 0.000 intron (NM_002504, intron 11 of 23) MLT1L|LTR|ERVL-MaLR 43089 NM_147134 4799 Hs.413074 NM_002504 ENSG00000086102 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding chr2-5429 chr2 117191111 117191321 + 8.96 0.000 Intergenic Intergenic -623475 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr16-2981 chr16 17556548 17556758 + 8.96 0.000 Intergenic MER5B|DNA|hAT-Charlie -85693 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr1-10622 chr1 179251813 179252023 + 8.96 0.000 Intergenic Intergenic -22234 NM_001136001 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr17-2729 chr17 75553064 75553274 + 8.96 0.000 intron (NM_001015002, intron 2 of 9) intron (NM_001015002, intron 2 of 9) 27467 NM_001015002 3993 Hs.514477 NM_004524 ENSG00000073350 LLGL2 HGL|Hugl-2|LGL2 LLGL scribble cell polarity complex component 2 protein-coding chr1-15139 chr1 103390459 103390669 + 8.96 0.000 Intergenic Intergenic 134947 NM_001286997 101928436 Hs.558999 NM_001286997 LOC101928436 - uncharacterized LOC101928436 protein-coding chr4-4524 chr4 67438046 67438256 + 8.96 0.000 Intergenic Intergenic -16151 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr3-11262 chr3 197996219 197996429 + 8.96 0.000 intron (NR_026786, intron 10 of 16) intron (NR_026786, intron 10 of 16) 36107 NR_026786 89782 Hs.518540 NM_033029 ENSG00000185621 LMLN GP63|INV|IX14|LMNL1|MSP leishmanolysin like peptidase protein-coding chr19-3602 chr19 50481868 50482078 + 8.96 0.000 intron (NM_175063, intron 7 of 7) intron (NM_175063, intron 7 of 7) -5125 NM_138411 112703 Hs.448941 NM_138411 ENSG00000142530 FAM71E1 - family with sequence similarity 71 member E1 protein-coding chrX-2430 chrX 77925331 77925541 + 8.96 0.000 intron (NM_001282224, intron 1 of 21) intron (NM_001282224, intron 1 of 21) 14743 NM_000052 538 Hs.496414 NM_000052 ENSG00000165240 ATP7A DSMAX|MK|MNK|SMAX3 ATPase copper transporting alpha protein-coding chr1-8616 chr1 195128080 195128290 + 8.96 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 960530 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr5-4934 chr5 74889275 74889485 + 8.96 0.000 Intergenic Intergenic -22414 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr5-6063 chr5 1297052 1297262 + 8.96 0.000 Intergenic AluSq2|SINE|Alu -2089 NR_149163 7015 Hs.492203 NM_198253 ENSG00000164362 TERT CMM9|DKCA2|DKCB4|EST2|PFBMFT1|TCS1|TP2|TRT|hEST2|hTRT telomerase reverse transcriptase protein-coding chr1-4046 chr1 203145209 203145419 + 8.96 0.000 intron (NM_001365066, intron 2 of 2) intron (NM_001365066, intron 2 of 2) 17588 NM_001365065 134 Hs.77867 NM_000674 ENSG00000163485 ADORA1 RDC7 adenosine A1 receptor protein-coding chr6-8026 chr6 118776642 118776852 + 8.96 0.000 Intergenic Intergenic -5961 NR_037662 100287632 Hs.334026 NR_037662 SELENOKP3 - selenoprotein K pseudogene 3 pseudo chr15-2927 chr15 45782330 45782540 + 8.96 0.000 intron (NR_135680, intron 1 of 4) LTR16E1|LTR|ERVL 77240 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr13-3662 chr13 33120024 33120234 + 8.96 0.000 intron (NM_178007, intron 7 of 13) intron (NM_178007, intron 7 of 13) 65962 NM_001243466 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr6-2480 chr6 53044107 53044317 + 8.96 0.000 intron (NM_014920, intron 1 of 13) MER1B|DNA|hAT-Charlie 17590 NM_016513 22858 Hs.417022 NM_014920 ENSG00000112144 ICK ECO|EJM10|LCK2|MRK intestinal cell kinase protein-coding chr8-3479 chr8 100564134 100564344 + 8.96 0.000 Intergenic Intergenic -4480 NM_001270377 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr4-4716 chr4 89341468 89341678 + 8.96 0.000 Intergenic Intergenic -33773 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr7-6997 chr7 117654476 117654686 + 8.96 0.000 intron (NM_000492, intron 24 of 26) THE1D|LTR|ERVL-MaLR -89905 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr7-4915 chr7 130698664 130698874 + 8.96 0.000 Intergenic Intergenic -11337 NM_001304968 114960 Hs.592266 NM_052933 ENSG00000213265 TSGA13 - testis specific 13 protein-coding chr3-8137 chr3 28146940 28147150 + 8.96 0.000 Intergenic MER3|DNA|hAT-Charlie -94574 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr20-1931 chr20 15377738 15377948 + 8.96 0.000 intron (NM_001351663, intron 6 of 17) intron (NM_001351663, intron 6 of 17) 181003 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr9-7648 chr9 63789320 63789530 + 8.96 0.000 Intergenic L1PA6|LINE|L1 -23516 NR_146625 203274 Hs.599821 NR_146625 LINC00537 - long intergenic non-protein coding RNA 537 ncRNA chr3-10618 chr3 145752986 145753196 + 8.96 0.000 Intergenic PABL_B-int|LTR|ERV1 316094 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr1-10374 chr1 155600150 155600360 + 8.96 0.000 Intergenic LTR5_Hs|LTR|ERVK -9915 NM_018116 55154 Hs.656547 NM_018116 ENSG00000125459 MSTO1 LST005|MMYAT|MST misato mitochondrial distribution and morphology regulator 1 protein-coding chr9-8367 chr9 117706655 117706865 + 8.96 0.000 intron (NM_138557, intron 1 of 1) L2c|LINE|L2 2357 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr6-2821 chr6 158226730 158226940 + 8.96 0.000 Intergenic L3|LINE|CR1 58488 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr11-4408 chr11 83447435 83447645 + 8.96 0.000 Intergenic HERVH-int|LTR|ERV1 -161133 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr2-3326 chr2 171160422 171160632 + 8.96 0.000 5' UTR (NM_012290, exon 1 of 21) 5' UTR (NM_012290, exon 1 of 21) 366 NM_012290 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr1-13345 chr1 246845656 246845866 + 8.96 0.000 intron (NM_015446, intron 33 of 35) intron (NM_015446, intron 33 of 35) 56144 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr18-2241 chr18 69723479 69723689 + 8.96 0.000 intron (NM_152721, intron 5 of 7) intron (NM_152721, intron 5 of 7) 224289 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr3-4359 chr3 185280824 185281034 + 8.96 0.000 Intergenic Intergenic -2012 NR_038322 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr9-5040 chr9 29986734 29986944 + 8.96 0.000 Intergenic MER101-int|LTR|ERV1 421615 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr16-6024 chr16 9076465 9076675 + 8.96 0.000 Intergenic AluJr|SINE|Alu -15074 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr22-1976 chr22 17486810 17487020 + 8.96 0.000 intron (NM_001290046, intron 2 of 18) MER5A|DNA|hAT-Charlie -76524 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr10-5305 chr10 70390011 70390221 + 8.96 0.000 Intergenic Intergenic -7466 NM_001278214 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 - leucine rich repeat containing 20 protein-coding chr14-4415 chr14 31165234 31165444 + 8.96 0.000 intron (NM_015382, intron 10 of 42) intron (NM_015382, intron 10 of 42) 42454 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr21-1099 chr21 34337613 34337823 + 8.96 0.000 Intergenic Intergenic -26306 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr2-4095 chr2 143840894 143841104 + 8.96 0.000 Intergenic Intergenic -96068 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr4-4353 chr4 38562528 38562738 + 8.96 0.000 Intergenic MamRTE1|LINE|RTE-BovB -1370 NR_146991 105374411 NR_146991 LINC02278 - long intergenic non-protein coding RNA 2278 ncRNA chr2-14454 chr2 223360083 223360293 + 8.96 0.000 Intergenic Intergenic 242173 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr7-7784 chr7 1973609 1973819 + 8.96 0.000 intron (NM_001013837, intron 15 of 18) intron (NM_001013837, intron 15 of 18) -33143 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr17-3347 chr17 77780208 77780418 + 8.96 0.000 Intergenic Intergenic -51754 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr15-1927 chr15 89315979 89316189 + 8.96 0.000 TTS (NM_002693) TTS (NM_002693) 10726 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr12-5285 chr12 110691797 110692007 + 8.96 0.000 Intergenic Intergenic -2125 NM_001040107 84329 Hs.211511 NM_032369 ENSG00000122986 HVCN1 HV1|VSOP hydrogen voltage gated channel 1 protein-coding chr16-6124 chr16 19327889 19328099 + 8.96 0.000 Intergenic L1M4|LINE|L1 42263 NM_001256720 728276 Hs.632180 NM_001256720 ENSG00000261210 CLEC19A - C-type lectin domain containing 19A protein-coding chr6-4783 chr6 75943436 75943646 + 8.96 0.000 intron (NM_001563, intron 14 of 16) MSTB1|LTR|ERVL-MaLR 129121 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr5-4558 chr5 20678447 20678657 + 8.96 0.000 intron (NR_149120, intron 3 of 11) intron (NR_149120, intron 3 of 11) -63017 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA chr4-8758 chr4 187082939 187083149 + 8.96 0.000 Intergenic Intergenic -118942 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr10-6686 chr10 114357483 114357693 + 8.96 0.000 intron (NM_001001936, intron 1 of 18) intron (NM_001001936, intron 1 of 18) 46914 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr14-1401 chr14 54798618 54798828 + 8.96 0.000 Intergenic MLT2C1|LTR|ERVL 43890 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr2-6979 chr2 133082367 133082577 + 8.96 0.000 intron (NM_207481, intron 6 of 17) intron (NM_207481, intron 6 of 17) 166915 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr2-12493 chr2 62660932 62661142 + 8.96 0.000 Intergenic Intergenic -12841 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr10-5069 chr10 43452974 43453184 + 8.96 0.000 intron (NM_001355444, intron 1 of 3) MER67B|LTR|ERV1 15968 NM_001355444 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding chr3-3815 chr3 18474606 18474816 + 8.96 0.000 intron (NR_125803, intron 4 of 6) L2c|LINE|L2 -29119 NM_001322872 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr3-2545 chr3 52420489 52420699 + 8.96 0.000 intron (NM_016483, intron 6 of 10) intron (NM_016483, intron 6 of 10) 9934 NM_001278221 51533 Hs.372719 NM_016483 ENSG00000010318 PHF7 HSPC045|HSPC226|NYD-SP6 PHD finger protein 7 protein-coding chr10-5286 chr10 69239785 69239995 + 8.96 0.000 intron (NM_025130, intron 5 of 17) FRAM|SINE|Alu -7400 NR_120648 101928994 Hs.562925 NR_120648 ENSG00000229261 LOC101928994 - uncharacterized LOC101928994 ncRNA chr9-5068 chr9 33518176 33518386 + 8.96 0.000 Intergenic L1PB4|LINE|L1 -5970 NM_001353432 441459 Hs.493710 NM_001013728 ENSG00000230453 ANKRD18B bA255A11.3|bA255A11.5 ankyrin repeat domain 18B protein-coding chr2-7883 chr2 53952741 53952951 + 8.96 0.000 intron (NM_014614, intron 1 of 46) MER1B|DNA|hAT-Charlie 18147 NM_014614 23198 Hs.413801 NM_014614 ENSG00000068878 PSME4 PA200 proteasome activator subunit 4 protein-coding chr20-2249 chr20 1920182 1920392 + 8.96 0.000 intron (NM_001040023, intron 2 of 7) intron (NM_001040023, intron 2 of 7) 24880 NM_001040023 140885 Hs.581021 NM_080792 ENSG00000198053 SIRPA BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP signal regulatory protein alpha protein-coding chr11-5132 chr11 260675 260885 + 8.96 0.000 Intergenic AluJr|SINE|Alu -17627 NM_001276700 171389 Hs.352611 NM_138329 ENSG00000174885 NLRP6 AVR|CLR11.4|NALP6|NAVR|NAVR/AVR|PAN3|PYPAF5 NLR family pyrin domain containing 6 protein-coding chr5-5350 chr5 131589696 131589906 + 8.96 0.000 intron (NM_016340, intron 4 of 27) intron (NM_016340, intron 4 of 27) 45428 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr5-7767 chr5 61697686 61697896 + 8.96 0.000 intron (NR_109910, intron 1 of 7) L2a|LINE|L2 641 NR_109910 101928651 Hs.662309 NR_109910 ENSG00000248529 LOC101928651 - uncharacterized LOC101928651 ncRNA chr16-4919 chr16 89541297 89541507 + 8.96 0.000 intron (NM_001363850, intron 9 of 17) L1MD2|LINE|L1 -19255 NM_000977 6137 Hs.410817 NM_000977 ENSG00000167526 RPL13 BBC1|D16S444E|D16S44E|L13 ribosomal protein L13 protein-coding chr5-7047 chr5 168754271 168754481 + 8.96 0.000 intron (NM_003062, intron 16 of 35) L1MA4|LINE|L1 13879 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr13-2431 chr13 46456078 46456288 + 8.96 0.000 intron (NR_120426, intron 5 of 5) LTR41B|LTR|ERVL 3002 NR_158370 112268117 Hs.539723 NR_158370 LOC112268117 - keratin associated protein 21-1 pseudogene pseudo chr11-3642 chr11 86291815 86292025 + 8.96 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -10320 NM_001322407 51501 Hs.283322 NM_016401 ENSG00000149196 HIKESHI C11orf73|HLD13|HSPC138|HSPC179|L7RN6|OPI10 heat shock protein nuclear import factor hikeshi protein-coding chr10-2663 chr10 95273547 95273757 + 8.96 0.000 intron (NM_020992, intron 1 of 6) L4_C_Mam|LINE|RTE-X 17351 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr7-4340 chr7 45241655 45241865 + 8.96 0.000 Intergenic Intergenic 83969 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr1-13866 chr1 21043299 21043509 + 8.96 0.000 intron (NM_003760, intron 2 of 31) intron (NM_003760, intron 2 of 31) -54972 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr4-3953 chr4 176111170 176111380 + 8.96 0.000 intron (NM_170710, intron 2 of 30) MER102b|DNA|hAT-Charlie 45434 NM_170710 116966 Hs.532056 NM_170710 ENSG00000150627 WDR17 - WD repeat domain 17 protein-coding chr14-3866 chr14 85933837 85934047 + 8.96 0.000 promoter-TSS (NR_110155) promoter-TSS (NR_110155) -736 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr20-4154 chr20 44157335 44157545 + 8.96 0.000 intron (NM_020433, intron 2 of 5) LTR16A|LTR|ERVL 29748 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr17-1852 chr17 19753139 19753349 + 8.96 0.000 Intergenic Intergenic -4946 NM_000691 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr10-5080 chr10 44558507 44558717 + 8.96 0.000 Intergenic Intergenic -173515 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr17-3837 chr17 43544611 43544821 + 8.96 0.000 TTS (NM_001322219) TTS (NM_001322219) 1183 NM_001369367 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr13-1183 chr13 44095008 44095218 + 8.96 0.000 Intergenic MER50B|LTR|ERV1 -15436 NR_104065 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr3-6502 chr3 112746687 112746897 + 8.96 0.000 intron (NR_110017, intron 1 of 4) LTR64|LTR|ERV1 2527 NR_110017 101929694 Hs.385630 NR_110017 ENSG00000240893 LINC02042 - long intergenic non-protein coding RNA 2042 ncRNA chr1-9655 chr1 47870019 47870229 + 8.96 0.000 intron (NM_001194986, intron 2 of 6) intron (NM_001194986, intron 2 of 6) 127261 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr12-5631 chr12 64258296 64258506 + 8.96 0.000 Intergenic AluJb|SINE|Alu -36105 NM_001300940 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr9-2307 chr9 136625145 136625355 + 8.96 0.000 Intergenic Intergenic -8069 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr1-10835 chr1 204048179 204048389 + 8.96 0.000 Intergenic L1ME1|LINE|L1 -7020 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr5-4233 chr5 133233975 133234185 + 8.96 0.000 intron (NM_015082, intron 7 of 15) MER58A|DNA|hAT-Charlie 182067 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr3-9813 chr3 73769501 73769711 + 8.96 0.000 Intergenic L1PA10|LINE|L1 -39638 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr5-8703 chr5 142400020 142400230 + 8.96 0.000 intron (NR_120664, intron 3 of 3) MLT1K|LTR|ERVL-MaLR 74832 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr7-5843 chr7 87312254 87312464 + 8.96 0.000 Intergenic Intergenic 33133 NR_015381 11257 Hs.274329 NM_007233 ENSG00000182165 TP53TG1 LINC00096|NCRNA00096|P53TG1|P53TG1-D|TP53AP1 TP53 target 1 ncRNA chr9-7041 chr9 123074064 123074274 + 8.96 0.000 intron (NM_012197, intron 16 of 25) intron (NM_012197, intron 16 of 25) 37474 NR_030331 693185 NR_030331 ENSG00000283941 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA chr18-2133 chr18 55090528 55090738 + 8.96 0.000 Intergenic Intergenic 33673 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr8-2864 chr8 137493033 137493243 + 8.96 0.000 Intergenic Intergenic -79550 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr1-15645 chr1 163588335 163588545 + 8.96 0.000 Intergenic L3|LINE|CR1 -165249 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr12-3006 chr12 124306474 124306684 + 8.96 0.000 intron (NM_001365156, intron 1 of 2) MIR|SINE|MIR 11486 NM_001365156 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr20-1312 chr20 62208635 62208845 + 8.96 0.000 Intergenic Intergenic 11538 NM_007232 11255 Hs.251399 NM_007232 ENSG00000101180 HRH3 GPCR97|HH3R histamine receptor H3 protein-coding chr19-5420 chr19 17796273 17796483 + 8.96 0.000 intron (NM_014256, intron 1 of 2) AluJr|SINE|Alu 1240 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr22-2811 chr22 43066302 43066512 + 8.96 0.000 intron (NR_027779, intron 6 of 11) intron (NR_027779, intron 6 of 11) 22984 NM_012263 25809 Hs.660298 NM_012263 ENSG00000100271 TTLL1 C22orf7|HS323M22B tubulin tyrosine ligase like 1 protein-coding chr10-6222 chr10 51919594 51919804 + 8.96 0.000 intron (NM_001098512, intron 5 of 17) intron (NM_001098512, intron 5 of 17) -220104 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr9-3931 chr9 135588407 135588617 + 8.96 0.000 Intergenic Intergenic 13587 NR_034017 100130954 Hs.550769 NR_034016 ENSG00000237339 LINC01502 - long intergenic non-protein coding RNA 1502 ncRNA chr1-14217 chr1 35488303 35488513 + 8.96 0.000 intron (NM_024874, intron 3 of 20) L2|LINE|L2 68995 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr1-6145 chr1 170896018 170896228 + 8.96 0.000 Intergenic Intergenic -39348 NM_001163629 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding chr1-6389 chr1 10308094 10308304 + 8.96 0.000 3' UTR (NM_183416, exon 21 of 21) 3' UTR (NM_183416, exon 21 of 21) 9233 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr1-8733 chr1 237360862 237361072 + 8.96 0.000 intron (NM_001035, intron 4 of 104) AluJo|SINE|Alu -110152 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr4-4543 chr4 70734041 70734251 + 8.96 0.000 promoter-TSS (NM_001291993) promoter-TSS (NM_001291993) -264 NM_001291993 22902 Hs.740904 NM_014961 ENSG00000018189 RUFY3 RIPX|SINGAR1|ZFYVE30 RUN and FYVE domain containing 3 protein-coding chr8-2806 chr8 124109690 124109900 + 8.96 0.000 intron (NM_001039112, intron 39 of 40) L2c|LINE|L2 61727 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr18-3517 chr18 74930863 74931073 + 8.96 0.000 intron (NM_017757, intron 7 of 7) L1MC4a|LINE|L1 274545 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr7-2913 chr7 133268165 133268375 + 8.96 0.000 intron (NM_021807, intron 1 of 17) MIRc|SINE|MIR 15192 NM_021807 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr1-8540 chr1 158455027 158455237 + 8.96 0.000 Intergenic Intergenic -10430 NM_001004473 391109 Hs.690410 NM_001004473 ENSG00000173285 OR10K1 OR1-6 olfactory receptor family 10 subfamily K member 1 protein-coding chr3-6686 chr3 131592694 131592904 + 8.96 0.000 intron (NM_130808, intron 7 of 15) intron (NM_130808, intron 7 of 15) -89828 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr6-581 chr6 117482805 117483015 + 8.96 0.000 intron (NM_173674, intron 1 of 14) CpG 236 NM_001366459 285761 Hs.658304 NM_173674 ENSG00000164465 DCBLD1 dJ94G16.1 discoidin, CUB and LCCL domain containing 1 protein-coding chr19-3165 chr19 39157678 39157888 + 8.96 0.000 intron (NM_001014834, intron 1 of 7) intron (NM_001014834, intron 1 of 7) 31997 NM_001014834 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr1-8777 chr1 1179103 1179313 + 8.96 0.000 promoter-TSS (NM_153254) promoter-TSS (NM_153254) -473 NM_153254 254173 Hs.454835 NM_153254 ENSG00000162571 TTLL10 TTLL5 tubulin tyrosine ligase like 10 protein-coding chr16-4550 chr16 66116265 66116475 + 8.96 0.000 Intergenic Intergenic -250321 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr7-8805 chr7 83005712 83005922 + 8.96 0.000 intron (NM_033026, intron 3 of 24) intron (NM_033026, intron 3 of 24) 157067 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr7-4393 chr7 90698672 90698882 + 8.96 0.000 intron (NM_001287135, intron 2 of 14) intron (NM_001287135, intron 2 of 14) -10621 NM_012395 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr11-5742 chr11 2535888 2536098 + 8.96 0.000 intron (NM_181798, intron 2 of 15) intron (NM_181798, intron 2 of 15) 74539 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr14-1724 chr14 41472945 41473155 + 8.96 0.000 Intergenic L1M1|LINE|L1 -133806 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr2-4313 chr2 236136503 236136713 + 8.96 0.000 Intergenic Intergenic 31778 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr16-1980 chr16 87227318 87227528 + 8.96 0.000 TTS (NR_110939) TTS (NR_110939) 15308 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr5-8687 chr5 141763218 141763428 + 8.96 0.000 Intergenic Intergenic -81093 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr8-7126 chr8 120504184 120504394 + 8.96 0.000 intron (NM_022045, intron 15 of 21) HAL1ME|LINE|L1 58870 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr1-7144 chr1 204985091 204985301 + 8.96 0.000 intron (NM_001160332, intron 21 of 27) intron (NM_001160332, intron 21 of 27) 40970 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr3-6465 chr3 107486219 107486429 + 8.96 0.000 Intergenic Intergenic -36638 NM_020235 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr1-5668 chr1 36856945 36857155 + 8.96 0.000 intron (NM_000831, intron 7 of 15) MIR|SINE|MIR 177465 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr4-5938 chr4 152907206 152907416 + 8.96 0.000 intron (NM_001025595, intron 8 of 8) intron (NM_001025595, intron 8 of 8) -29012 NM_001371116 chr11-5641 chr11 122284326 122284536 + 8.96 0.000 intron (NR_137180, intron 2 of 4) L1MA5|LINE|L1 25056 NR_137180 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr18-2964 chr18 22324546 22324756 + 8.96 0.000 Intergenic Intergenic 93264 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T cell lymphoma-associated antigen 1 protein-coding chr2-12488 chr2 62334734 62334944 + 8.96 0.000 Intergenic L2a|LINE|L2 119318 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr2-6191 chr2 10043287 10043497 + 8.96 0.000 promoter-TSS (NR_135558) promoter-TSS (NR_135558) 9 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr10-7328 chr10 411976 412186 + 8.96 0.000 intron (NM_014974, intron 8 of 36) intron (NM_014974, intron 8 of 36) -216483 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr10-6369 chr10 132650754 132650964 + 8.96 0.000 intron (NM_005539, intron 4 of 15) intron (NM_005539, intron 4 of 15) -30416 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr8-3535 chr8 120336600 120336810 + 8.96 0.000 intron (NM_021110, intron 42 of 47) intron (NM_021110, intron 42 of 47) 108445 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr6-8478 chr6 156496651 156496861 + 8.96 0.000 Intergenic AluY|SINE|Alu 118006 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr7-5609 chr7 51612472 51612682 + 8.96 0.000 Intergenic MER5A|DNA|hAT-Charlie -219321 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr5-6585 chr5 26442270 26442480 + 8.96 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 596211 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr2-6089 chr2 177784354 177784564 + 8.96 0.000 intron (NM_001077197, intron 10 of 20) MER41B|LTR|ERV1 104297 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr10-6675 chr10 108880669 108880879 + 8.96 0.000 Intergenic Intergenic -811481 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr11-2536 chr11 77560015 77560225 + 8.96 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 -10969 NR_130930 646029 Hs.609654 NM_001039908 LOC646029 - uncharacterized LOC646029 ncRNA chr14-2902 chr14 37899427 37899637 + 8.96 0.000 intron (NR_135286, intron 1 of 1) intron (NR_135286, intron 1 of 1) 2592 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr4-2539 chr4 70651988 70652198 + 8.96 0.000 Intergenic MIR|SINE|MIR 14382 NM_001368133 10117 Hs.667018 NM_031889 ENSG00000132464 ENAM ADAI|AI1C|AIH2 enamelin protein-coding chr11-6295 chr11 61524487 61524697 + 8.96 0.000 intron (NM_001370211, intron 5 of 7) intron (NM_001370211, intron 5 of 7) 15843 NM_001145077 390205 Hs.441122 NM_001145077 ENSG00000204950 LRRC10B - leucine rich repeat containing 10B protein-coding chr9-5730 chr9 126165134 126165344 + 8.96 0.000 Intergenic Intergenic 110676 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr12-7049 chr12 40286678 40286888 + 8.96 0.000 intron (NM_198578, intron 19 of 50) intron (NM_198578, intron 19 of 50) 61786 NM_198578 120892 Hs.187636 NM_198578 ENSG00000188906 LRRK2 AURA17|DARDARIN|PARK8|RIPK7|ROCO2 leucine rich repeat kinase 2 protein-coding chr9-5367 chr9 90925688 90925898 + 8.96 0.000 Intergenic L1ME3A|LINE|L1 98373 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr13-3694 chr13 36716478 36716688 + 8.96 0.000 Intergenic Intergenic 42563 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr3-9638 chr3 59952995 59953205 + 8.96 0.000 intron (NM_001320901, intron 5 of 6) intron (NM_001320901, intron 5 of 6) 127809 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr11-6184 chr11 45289464 45289674 + 8.96 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -3228 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr22-2341 chr22 42032317 42032527 + 8.96 0.000 Intergenic Intergenic 33634 NM_152613 164684 Hs.655541 NM_152613 ENSG00000183066 WBP2NL GRAMD7|PAWP WBP2 N-terminal like protein-coding chr6-3515 chr6 35476790 35477000 + 8.96 0.000 intron (NM_003214, intron 8 of 12) AluSq2|SINE|Alu 6387 NR_106961 102465668 NR_106961 ENSG00000276712 MIR7111 hsa-mir-7111 microRNA 7111 ncRNA chrX-2469 chrX 85018032 85018242 + 8.96 0.000 intron (NM_198450, intron 1 of 8) L1M3c|LINE|L1 14260 NM_198450 139322 Hs.512181 NM_198450 ENSG00000155008 APOOL CXorf33|FAM121A|MICOS27|Mic27|UNQ8193 apolipoprotein O like protein-coding chrX-5328 chrX 146214960 146215170 + 8.96 0.000 Intergenic LTR33B|LTR|ERVL -187193 NR_030581 100126341 NR_030581 ENSG00000216056 MIR891A MIRN891A microRNA 891a ncRNA chr2-8758 chr2 162495700 162495910 + 8.96 0.000 intron (NM_033272, intron 6 of 15) LTR25-int|LTR|ERV1 151437 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr4-8695 chr4 181445936 181446146 + 8.96 0.000 Intergenic L2a|LINE|L2 -181012 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr12-3991 chr12 22196639 22196849 + 8.96 0.000 3' UTR (NM_001304450, exon 4 of 4) 3' UTR (NM_001304450, exon 4 of 4) 137970 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr2-10982 chr2 97565719 97565929 + 8.96 0.000 intron (NM_025190, intron 6 of 43) L1P3|LINE|L1 24053 NM_001353337 57730 Hs.532921 NM_020970 ENSG00000196912 ANKRD36B KIAA1641 ankyrin repeat domain 36B protein-coding chr13-1578 chr13 37194342 37194552 + 8.96 0.000 Intergenic L1PA16|LINE|L1 -88783 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr12-2350 chr12 6783373 6783583 + 8.96 0.000 Intergenic Intergenic -6050 NM_001195017 920 Hs.631659 NM_000616 ENSG00000010610 CD4 CD4mut CD4 molecule protein-coding chr4-4755 chr4 97353419 97353629 + 8.96 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -13402 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr7-4283 chr7 14552881 14553091 + 8.96 0.000 intron (NM_001350717, intron 19 of 24) intron (NM_001350717, intron 19 of 24) 288464 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr1-6890 chr1 118869970 118870180 + 8.96 0.000 Intergenic Intergenic 118268 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr11-2863 chr11 12625865 12626075 + 8.96 0.000 Intergenic L1MB7|LINE|L1 -48451 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr3-7737 chr3 53304103 53304313 + 8.96 0.000 exon (NM_001290205, exon 7 of 11) exon (NM_001290205, exon 7 of 11) 28919 NR_145715 109617024 NR_145715 ENSG00000207109 SNORD38C - small nucleolar RNA, C/D box 38C snoRNA chr20-1155 chr20 51354542 51354752 + 8.96 0.000 Intergenic Intergenic 98330 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr15-2377 chr15 48823420 48823630 + 8.96 0.000 TTS (NM_203349) TTS (NM_203349) -12456 NM_014985 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr16-6975 chr16 86411726 86411936 + 8.96 0.000 Intergenic MIR|SINE|MIR -66152 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr4-8149 chr4 128601476 128601686 + 8.96 0.000 Intergenic MamRTE1|LINE|RTE-BovB 173565 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr17-5149 chr17 8346695 8346905 + 8.96 0.000 TTS (NM_001319953) TTS (NM_001319953) 6960 NM_153007 146852 Hs.186045 NM_153007 ENSG00000184650 ODF4 CT134|CT136|OPPO1 outer dense fiber of sperm tails 4 protein-coding chr14-2246 chr14 105370845 105371055 + 8.96 0.000 intron (NM_015197, intron 8 of 23) intron (NM_015197, intron 8 of 23) -27588 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding chr5-6700 chr5 65186016 65186226 + 8.96 0.000 intron (NR_135689, intron 23 of 25) intron (NR_135689, intron 23 of 25) 295799 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr8-4236 chr8 88901443 88901653 + 8.96 0.000 Intergenic L1PA6|LINE|L1 -574065 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr2-13480 chr2 147360379 147360589 + 8.96 0.000 Intergenic Intergenic -484033 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr5-2969 chr5 173311033 173311243 + 8.96 0.000 Intergenic Intergenic 7408 NR_162132 113219469 NR_162132 MIR12118 - microRNA 12118 ncRNA chr7-2962 chr7 158588384 158588594 + 8.96 0.000 promoter-TSS (NM_001308267) promoter-TSS (NM_001308267) -666 NM_130843 5799 Hs.490789 NM_002847 ENSG00000155093 PTPRN2 IA-2beta|IAR|ICAAR|PTPRP|R-PTP-N2 protein tyrosine phosphatase receptor type N2 protein-coding chr20-4053 chr20 37652290 37652500 + 8.96 0.000 Intergenic Intergenic -24515 NR_040021 100287792 Hs.517026 NM_001001690 ENSG00000204117 LOC100287792 - uncharacterized LOC100287792 ncRNA chr9-3426 chr9 135804387 135804597 + 8.96 0.000 Intergenic AluSx|SINE|Alu 102307 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr3-3012 chr3 106482536 106482746 + 8.96 0.000 Intergenic Intergenic -613240 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chrX-4072 chrX 21391051 21391261 + 8.96 0.000 intron (NM_001168648, intron 1 of 20) MSTA-int|LTR|ERVL-MaLR 16738 NM_001330771 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr19-4029 chr19 4807412 4807622 + 8.96 0.000 Intergenic Intergenic 15783 NM_018708 55527 Hs.515082 NM_018708 ENSG00000141965 FEM1A EPRAP fem-1 homolog A protein-coding chr5-4869 chr5 65525056 65525266 + 8.96 0.000 intron (NM_001349369, intron 9 of 10) AluSx|SINE|Alu 38007 NM_001349368 64105 Hs.529778 NM_022145 ENSG00000123219 CENPK AF5alpha|CENP-K|FKSG14|P33|Solt centromere protein K protein-coding chr5-7903 chr5 76226026 76226236 + 8.96 0.000 intron (NM_014979, intron 4 of 12) intron (NM_014979, intron 4 of 12) 142748 NM_014979 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr8-1669 chr8 37544050 37544260 + 8.96 0.000 Intergenic Intergenic -22769 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr11-6209 chr11 46260875 46261085 + 8.96 0.000 Intergenic Intergenic -16682 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr2-9168 chr2 213104762 213104972 + 8.96 0.000 intron (NM_001371277, intron 3 of 6) intron (NM_001371277, intron 3 of 6) 45570 NM_016260 22807 Hs.604950 NM_016260 ENSG00000030419 IKZF2 ANF1A2|HELIOS|ZNF1A2|ZNFN1A2 IKAROS family zinc finger 2 protein-coding chr4-7873 chr4 104417568 104417778 + 8.96 0.000 Intergenic MIR|SINE|MIR -73292 NR_125926 101929468 Hs.480435 NR_125926 ENSG00000245384 CXXC4-AS1 - CXXC4 antisense RNA 1 ncRNA chr1-11382 chr1 46529985 46530195 + 8.96 0.000 Intergenic Intergenic 5425 NM_001357063 105378696 NM_001357063 ENSG00000282881 TMEM275 - transmembrane protein 275 protein-coding chr3-10654 chr3 149115119 149115329 + 8.96 0.000 Intergenic MER1B|DNA|hAT-Charlie -14414 NM_032383 84343 Hs.558314 NM_032383 ENSG00000163755 HPS3 BLOC2S1|SUTAL HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 protein-coding chr17-4880 chr17 67779460 67779670 + 8.96 0.000 Intergenic Intergenic 38895 NR_003706 100124536 Hs.693446 NR_003706 ENSG00000200394 SNORA38B - small nucleolar RNA, H/ACA box 38B snoRNA chr2-8338 chr2 108807867 108808077 + 8.96 0.000 intron (NM_144978, intron 7 of 14) L1MA5|LINE|L1 21201 NR_147236 165055 Hs.362702 NM_144978 ENSG00000163006 CCDC138 - coiled-coil domain containing 138 protein-coding chr8-4460 chr8 116138478 116138688 + 8.96 0.000 intron (NR_046215, intron 4 of 13) intron (NR_046215, intron 4 of 13) 186476 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr2-14185 chr2 206717296 206717506 + 8.96 0.000 intron (NM_001093730, intron 1 of 11) MER5A|DNA|hAT-Charlie 995 NM_001093730 391475 Hs.640667 NM_001093730 ENSG00000232125 DYTN - dystrotelin protein-coding chrX-2110 chrX 25724901 25725111 + 8.96 0.000 Intergenic L1M1|LINE|L1 -413337 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr5-5620 chr5 154131901 154132111 + 8.96 0.000 Intergenic L1MEc|LINE|L1 -58727 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr6-3041 chr6 56764141 56764351 + 8.96 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 79419 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr2-9484 chr2 235978713 235978923 + 8.96 0.000 intron (NM_001037131, intron 13 of 17) intron (NM_001037131, intron 13 of 17) 189568 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr14-4594 chr14 51108326 51108536 + 8.96 0.000 Intergenic Intergenic -12727 NM_052978 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr6-6857 chr6 9503415 9503625 + 8.96 0.000 Intergenic Intergenic 851311 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr8-2359 chr8 28089170 28089380 + 8.96 0.000 promoter-TSS (NM_001284222) promoter-TSS (NM_001284222) -957 NM_001284222 55140 Hs.491336 NM_018091 ENSG00000134014 ELP3 KAT9 elongator acetyltransferase complex subunit 3 protein-coding chr11-10272 chr11 103090430 103090640 + 8.96 0.000 intron (NM_001318740, intron 1 of 6) intron (NM_001318740, intron 1 of 6) 1625 NM_001318741 84259 Hs.503716 NM_032299 ENSG00000137692 DCUN1D5 SCCRO5 defective in cullin neddylation 1 domain containing 5 protein-coding chr5-5781 chr5 174100847 174101057 + 8.96 0.000 intron (NM_015980, intron 3 of 4) intron (NM_015980, intron 3 of 4) 55246 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr11-4283 chr11 66668512 66668722 + 8.96 0.000 TTS (NM_001198844) TTS (NM_001198844) 9270 NM_031492 83759 Hs.618713 NM_031492 ENSG00000173914 RBM4B RBM30|RBM4L|ZCCHC15|ZCCHC21B|ZCRB3B RNA binding motif protein 4B protein-coding chr12-5359 chr12 118399036 118399246 + 8.96 0.000 intron (NM_022491, intron 6 of 11) intron (NM_022491, intron 6 of 11) 22586 NM_022491 64426 Hs.416630 NM_022491 ENSG00000111707 SUDS3 SAP45|SDS3 SDS3 homolog, SIN3A corepressor complex component protein-coding chr3-7735 chr3 52794709 52794919 + 8.96 0.000 promoter-TSS (NM_002217) promoter-TSS (NM_002217) 46 NM_002217 3699 Hs.76716 NM_002217 ENSG00000162267 ITIH3 H3P|ITI-HC3|SHAP inter-alpha-trypsin inhibitor heavy chain 3 protein-coding chr5-2297 chr5 54087294 54087504 + 8.96 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) -135800 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr3-6714 chr3 134752039 134752249 + 8.96 0.000 Intergenic Intergenic -43116 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr6-3317 chr6 166461137 166461347 + 8.96 0.000 intron (NR_046793, intron 3 of 3) intron (NR_046793, intron 3 of 3) 4141 NR_046793 100874353 Hs.675698 NR_046793 ENSG00000232082 RPS6KA2-IT1 - RPS6KA2 intronic transcript 1 ncRNA chr2-12005 chr2 28321405 28321615 + 8.96 0.000 intron (NR_137438, intron 12 of 12) intron (NR_137438, intron 12 of 12) -11051 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr16-6761 chr16 75480063 75480273 + 8.96 0.000 intron (NM_021615, intron 2 of 2) intron (NM_021615, intron 2 of 2) 15273 NM_021615 4166 Hs.655622 NM_021615 ENSG00000183196 CHST6 C-GlcNAc6ST|GST4-beta|MCDC1|glcNAc6ST-5|gn6st-5|hCGn6ST carbohydrate sulfotransferase 6 protein-coding chr13-1191 chr13 48094997 48095207 + 8.96 0.000 promoter-TSS (NM_001270629) promoter-TSS (NM_001270629) 2 NM_014166 29079 Hs.181112 NM_014166 ENSG00000136146 MED4 ARC36|DRIP36|HSPC126|TRAP36|VDRIP mediator complex subunit 4 protein-coding chr7-6307 chr7 140390795 140391005 + 8.96 0.000 intron (NM_032295, intron 1 of 11) L2a|LINE|L2 7630 NM_001363375 84255 Hs.446021 NM_032295 ENSG00000157800 SLC37A3 - solute carrier family 37 member 3 protein-coding chr12-7853 chr12 104101688 104101898 + 8.96 0.000 intron (NM_013320, intron 13 of 14) intron (NM_013320, intron 13 of 14) 36417 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr12-6047 chr12 112161123 112161333 + 8.96 0.000 3' UTR (NM_001109662, exon 76 of 76) 3' UTR (NM_001109662, exon 76 of 76) 2093 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr13-1296 chr13 44788798 44789008 + 8.96 0.000 Intergenic Intergenic 20727 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chrX-2716 chrX 121907880 121908090 + 8.96 0.000 Intergenic MER61-int|LTR|ERV1 537013 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr13-2911 chr13 113774032 113774242 + 8.96 0.000 intron (NM_182614, intron 3 of 8) L1MC5|LINE|L1 14894 NM_001348663 348013 Hs.280805 NM_182614 ENSG00000184497 TMEM255B FAM70B transmembrane protein 255B protein-coding chr22-2530 chr22 25089751 25089961 + 8.96 0.000 intron (NM_001145206, intron 4 of 10) L1ME3G|LINE|L1 22836 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr9-7546 chr9 34926544 34926754 + 8.96 0.000 Intergenic L1MA3|LINE|L1 -30838 NM_001304333 23349 Hs.7989 NM_015297 ENSG00000122733 PHF24 - PHD finger protein 24 protein-coding chr2-8520 chr2 129811369 129811579 + 8.96 0.000 Intergenic Intergenic 66017 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr10-4926 chr10 24174669 24174879 + 8.96 0.000 intron (NM_001098500, intron 2 of 18) L1PB1|LINE|L1 -34017 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr9-7262 chr9 5455336 5455546 + 8.96 0.000 intron (NR_052005, intron 1 of 7) intron (NR_052005, intron 1 of 7) 4899 NM_001314029 29126 Hs.521989 NM_014143 ENSG00000120217 CD274 B7-H|B7H1|PD-L1|PDCD1L1|PDCD1LG1|PDL1|hPD-L1 CD274 molecule protein-coding chr8-2837 chr8 130326835 130327045 + 8.96 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -30407 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr8-4982 chr8 134984097 134984307 + 8.96 0.000 Intergenic L1MEd|LINE|L1 134267 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr2-6332 chr2 74385304 74385514 + 8.96 0.000 promoter-TSS (NR_158172) promoter-TSS (NR_158172) -94 NR_158173 100189589 Hs.585961 NR_024463 ENSG00000237737 DCTN1-AS1 - DCTN1 antisense RNA 1 ncRNA chr5-2424 chr5 118440380 118440590 + 8.96 0.000 intron (NR_104610, intron 9 of 9) intron (NR_104610, intron 9 of 9) 121632 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chr16-5632 chr16 64100667 64100877 + 8.96 0.000 Intergenic AluSq|SINE|Alu 1021291 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr5-4239 chr5 134397407 134397617 + 8.96 0.000 Intergenic Intergenic 14369 NM_080656 91368 Hs.156506 NM_080656 ENSG00000237190 CDKN2AIPNL C2AIL CDKN2A interacting protein N-terminal like protein-coding chr6-6856 chr6 9334460 9334670 + 8.96 0.000 Intergenic Intergenic 682356 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr10-4874 chr10 17035845 17036055 + 8.96 0.000 intron (NM_001081, intron 27 of 66) L1PREC2|LINE|L1 93867 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr19-6586 chr19 23908145 23908355 + 8.96 0.000 Intergenic BSR/Beta|Satellite|Satellite -6636 NM_001348687 730087 Hs.655305 NM_001190829 ENSG00000213967 ZNF726 ZNF92P3 zinc finger protein 726 protein-coding chr10-2206 chr10 43217426 43217636 + 8.96 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) 12208 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr4-5378 chr4 188194286 188194496 + 8.96 0.000 Intergenic L1MA4A|LINE|L1 54950 NM_178556 339976 Hs.348618 NM_178556 ENSG00000184108 TRIML1 RNF209 tripartite motif family like 1 protein-coding chr12-3005 chr12 123779464 123779674 + 8.96 0.000 intron (NM_207437, intron 5 of 77) L1MC5|LINE|L1 17074 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr9-8317 chr9 114304393 114304603 + 8.96 0.000 intron (NM_032888, intron 56 of 60) intron (NM_032888, intron 56 of 60) -18525 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr16-5950 chr16 4089764 4089974 + 8.96 0.000 intron (NM_001116, intron 2 of 10) intron (NM_001116, intron 2 of 10) 26573 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr3-8098 chr3 14796154 14796364 + 8.96 0.000 Intergenic Intergenic 15155 NR_135245 152274 Hs.434128 NR_135245 ENSG00000260902 LINC02011 - long intergenic non-protein coding RNA 2011 ncRNA chr16-2751 chr16 2296679 2296889 + 8.96 0.000 intron (NM_001089, intron 17 of 32) MLT1J|LTR|ERVL-MaLR 22164 NR_039868 100616241 NR_039868 ENSG00000264004 MIR4717 - microRNA 4717 ncRNA chr2-12787 chr2 86505556 86505766 + 8.96 0.000 non-coding (NR_036454, exon 4 of 4) non-coding (NR_036454, exon 4 of 4) 57782 NM_001193517 51652 Hs.591582 NM_016079 ENSG00000115561 CHMP3 CGI-149|NEDF|VPS24 charged multivesicular body protein 3 protein-coding chr11-6091 chr11 34299388 34299598 + 8.96 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 58517 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr8-3176 chr8 100644299 100644509 + 8.96 0.000 intron (NM_152628, intron 2 of 13) intron (NM_152628, intron 2 of 13) 5261 NM_152628 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr5-5456 chr5 138527147 138527357 + 8.96 0.000 intron (NR_157090, intron 2 of 9) intron (NR_157090, intron 2 of 9) 14459 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr7-3946 chr7 130070990 130071200 + 8.96 0.000 intron (NM_014997, intron 1 of 9) intron (NM_014997, intron 1 of 9) 561 NM_014997 23008 Hs.520710 NM_014997 ENSG00000128607 KLHDC10 slim kelch domain containing 10 protein-coding chr17-5054 chr17 2631471 2631681 + 8.96 0.000 intron (NM_000430, intron 1 of 10) L1PBa1|LINE|L1 37922 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr2-4438 chr2 176931825 176932035 + 8.96 0.000 Intergenic (GTTTTG)n|Simple_repeat|Simple_repeat 280481 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr1-6993 chr1 167479071 167479281 + 8.96 0.000 intron (NM_000734, intron 1 of 7) intron (NM_000734, intron 1 of 7) 39353 NM_000734 919 Hs.156445 NM_000734 ENSG00000198821 CD247 CD3-ZETA|CD3H|CD3Q|CD3Z|IMD25|T3Z|TCRZ CD247 molecule protein-coding chr14-4984 chr14 75794028 75794238 + 8.96 0.000 intron (NM_015072, intron 27 of 31) intron (NM_015072, intron 27 of 31) 132887 NM_015072 23093 Hs.709609 NM_015072 ENSG00000119685 TTLL5 CORD19|KIAA0998|STAMP tubulin tyrosine ligase like 5 protein-coding chr1-11962 chr1 74956882 74957092 + 8.96 0.000 Intergenic LTR16B|LTR|ERVL -171447 NM_001001933 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr3-3628 chr3 107800689 107800899 + 8.96 0.000 intron (NM_001276286, intron 15 of 16) intron (NM_001276286, intron 15 of 16) 77274 NR_024276 151658 Hs.159043 NR_015414 ENSG00000241469 LINC00635 - long intergenic non-protein coding RNA 635 ncRNA chr13-2602 chr13 74439256 74439466 + 8.96 0.000 Intergenic Intergenic 20188 NR_047005 100874151 Hs.564552 NR_047005 ENSG00000226240 LINC00381 - long intergenic non-protein coding RNA 381 ncRNA chr1-12939 chr1 148150936 148151146 + 8.96 0.000 intron (NR_110864, intron 1 of 22) intron (NR_110864, intron 1 of 22) 1240 NM_183372 200030 Hs.721588 NM_183372 ENSG00000263956 NBPF11 NBPF24 NBPF member 11 protein-coding chr11-10025 chr11 82003884 82004094 + 8.96 0.000 intron (NR_120571, intron 6 of 7) LTR1D|LTR|ERV1 -113153 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr20-2245 chr20 1341983 1342193 + 8.96 0.000 intron (NR_040047, intron 1 of 2) intron (NR_040047, intron 1 of 2) -12949 NM_080489 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2|ST2 syndecan binding protein 2 protein-coding chr10-8932 chr10 116565842 116566052 + 8.96 0.000 intron (NM_000936, intron 12 of 12) AluSx|SINE|Alu 20016 NM_000936 5406 Hs.501135 NM_000936 ENSG00000175535 PNLIP PL|PNLIPD|PTL pancreatic lipase protein-coding chr22-1877 chr22 42925812 42926022 + 8.96 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 21124 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr16-6031 chr16 9669318 9669528 + 8.96 0.000 Intergenic Intergenic -213918 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr7-7454 chr7 87570430 87570640 + 8.96 0.000 intron (NM_001348944, intron 6 of 29) intron (NM_001348944, intron 6 of 29) 30349 NM_001348946 5243 Hs.489033 NM_000927 ENSG00000085563 ABCB1 ABC20|CD243|CLCS|GP170|MDR1|P-GP|PGY1 ATP binding cassette subfamily B member 1 protein-coding chr6-3006 chr6 44338541 44338751 + 8.96 0.000 Intergenic Intergenic -4014 NM_145026 221409 Hs.135283 NM_145026 ENSG00000249481 SPATS1 DDIP|SPATA8|SRSP1 spermatogenesis associated serine rich 1 protein-coding chr7-3362 chr7 99558906 99559116 + 8.96 0.000 5' UTR (NM_001009958, exon 1 of 3) 5' UTR (NM_001009958, exon 1 of 3) 177 NM_001363333 79027 Hs.599798 NM_024061 ENSG00000197343 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding chr5-6809 chr5 100840368 100840578 + 8.96 0.000 intron (NM_005668, intron 4 of 4) intron (NM_005668, intron 4 of 4) -23908 NR_031686 100302288 NR_031686 ENSG00000221263 MIR548P MIRN548P|hsa-mir-548p microRNA 548p ncRNA chr3-2645 chr3 13723341 13723551 + 8.96 0.000 intron (NR_027103, intron 4 of 5) L1M4b|LINE|L1 72725 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr12-3087 chr12 13739539 13739749 + 8.96 0.000 intron (NM_000834, intron 3 of 12) intron (NM_000834, intron 3 of 12) 240712 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr15-2831 chr15 40047324 40047534 + 8.96 0.000 intron (NR_040060, intron 2 of 2) intron (NR_040060, intron 2 of 2) 8118 NR_040062 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr6-1527 chr6 36724636 36724846 + 8.96 0.000 intron (NM_001257357, intron 9 of 13) intron (NM_001257357, intron 9 of 13) 26915 NM_001257357 401258 Hs.485258 NM_207498 ENSG00000255587 RAB44 RASD3|RASL13|dJ431A14.3 RAB44, member RAS oncogene family protein-coding chr11-10004 chr11 79635834 79636044 + 8.96 0.000 Intergenic MIRb|SINE|MIR -194909 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr17-3034 chr17 78456596 78456806 + 8.96 0.000 intron (NM_173628, intron 62 of 80) intron (NM_173628, intron 62 of 80) -28209 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr7-4615 chr7 23684909 23685119 + 8.96 0.000 intron (NM_199136, intron 2 of 6) AluSx3|SINE|Alu 4815 NM_199136 340277 Hs.592178 NM_199136 ENSG00000188732 FAM221A C7orf46 family with sequence similarity 221 member A protein-coding chr10-4212 chr10 118137004 118137214 + 8.96 0.000 intron (NR_026940, intron 3 of 3) L1ME3F|LINE|L1 -90168 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chrX-1914 chrX 148489488 148489698 + 8.96 0.000 Intergenic Intergenic -11024 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr2-6408 chr2 131391635 131391845 + 8.96 0.000 Intergenic Intergenic -11161 NR_036499 389043 Hs.586791 NR_036499 LINC01120 - long intergenic non-protein coding RNA 1120 ncRNA chr1-10227 chr1 115430060 115430270 + 8.96 0.000 Intergenic Intergenic -91929 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr11-5780 chr11 4872663 4872873 + 8.96 0.000 Intergenic Intergenic -8932 NM_001004759 401665 NM_001004759 ENSG00000176900 OR51T1 OR11-26 olfactory receptor family 51 subfamily T member 1 protein-coding chr1-7530 chr1 170611678 170611888 + 8.96 0.000 Intergenic L1PA7|LINE|L1 -52348 NM_022716 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr10-3386 chr10 27513528 27513738 + 8.96 0.000 intron (NR_046172, intron 2 of 5) L1M7|LINE|L1 9329 NM_021252 22931 Hs.406799 NM_021252 ENSG00000099246 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding chr1-9144 chr1 19283345 19283555 + 8.96 0.000 intron (NM_012067, intron 6 of 6) MIRb|SINE|MIR 5320 NM_012067 22977 Hs.6980 NM_012067 ENSG00000162482 AKR7A3 AFAR2 aldo-keto reductase family 7 member A3 protein-coding chr6-8040 chr6 119865796 119866006 + 8.96 0.000 Intergenic Intergenic -149278 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr17-4456 chr17 54379225 54379435 + 8.96 0.000 Intergenic Intergenic -521361 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr20-1749 chr20 48609156 48609366 + 8.96 0.000 Intergenic Intergenic 218738 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr1-11210 chr1 244569139 244569349 + 8.96 0.000 intron (NM_001130957, intron 10 of 21) L1PA7|LINE|L1 -83804 NR_123735 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr1-6445 chr1 16969346 16969556 + 8.96 0.000 intron (NM_014675, intron 32 of 36) intron (NM_014675, intron 32 of 36) 11169 NM_002403 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr12-3950 chr12 6114784 6114994 + 8.96 0.000 intron (NM_000552, intron 3 of 51) intron (NM_000552, intron 3 of 51) 9786 NM_000552 7450 Hs.440848 NM_000552 ENSG00000110799 VWF F8VWF|VWD von Willebrand factor protein-coding chr16-3918 chr16 83989768 83989978 + 8.96 0.000 intron (NM_019065, intron 5 of 12) intron (NM_019065, intron 5 of 12) 21225 NM_001329749 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr11-3541 chr11 17410171 17410381 + 8.96 0.000 intron (NR_147094, intron 22 of 37) intron (NR_147094, intron 22 of 37) -20930 NM_001166290 3767 Hs.248141 NM_000525 ENSG00000187486 KCNJ11 BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3 potassium voltage-gated channel subfamily J member 11 protein-coding chr6-3457 chr6 158376377 158376587 + 8.96 0.000 intron (NM_020245, intron 1 of 13) MLT1G3|LTR|ERVL-MaLR 53500 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr4-7652 chr4 84887074 84887284 + 8.96 0.000 intron (NM_014991, intron 3 of 67) intron (NM_014991, intron 3 of 67) -78437 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr18-1436 chr18 22897079 22897289 + 8.96 0.000 Intergenic Intergenic -36144 NM_002894 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr4-7239 chr4 45535365 45535575 + 8.96 0.000 Intergenic HERV9NC-int|LTR|ERV1 588584 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr6-3186 chr6 128806321 128806531 + 8.96 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -76712 NM_001079823 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr3-4956 chr3 10768789 10768999 + 8.96 0.000 Intergenic Intergenic -4685 NR_027102 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA chrX-2737 chrX 126439392 126439602 + 8.96 0.000 Intergenic MER103C|DNA|hAT-Charlie 113317 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr4-8444 chr4 154844349 154844559 + 8.96 0.000 Intergenic L1MC4|LINE|L1 62949 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr1-5656 chr1 28153193 28153403 + 8.96 0.000 intron (NM_001164722, intron 1 of 1) intron (NM_001164722, intron 1 of 1) 23392 NM_001164723 5724 Hs.77542 NM_000952 ENSG00000169403 PTAFR PAFR platelet activating factor receptor protein-coding chr9-5498 chr9 104003708 104003918 + 8.96 0.000 Intergenic Intergenic 4104 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr1-7571 chr1 206965688 206965898 + 8.96 0.000 exon (NM_032029, exon 4 of 7) exon (NM_032029, exon 4 of 7) 4667 NM_001122979 83953 Hs.145519 NM_032029 ENSG00000162897 FCAMR CD351|FCA/MR|FKSG87 Fc fragment of IgA and IgM receptor protein-coding chr5-8303 chr5 115042510 115042720 + 8.96 0.000 Intergenic L1PA7|LINE|L1 127293 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr2-8295 chr2 104519059 104519269 + 8.96 0.000 Intergenic Intergenic -8655 NR_110113 101927360 Hs.650324 NR_110113 ENSG00000234781 LINC01103 - long intergenic non-protein coding RNA 1103 ncRNA chr5-4329 chr5 157561245 157561455 + 8.96 0.000 intron (NM_033274, intron 3 of 22) intron (NM_033274, intron 3 of 22) 14425 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr5-4672 chr5 37888592 37888802 + 8.96 0.000 Intergenic Intergenic 48259 NR_103441 100861519 Hs.536820 NM_001278094 GDNF-AS1 GDNFOS GDNF antisense RNA 1 ncRNA chr1-9059 chr1 14925634 14925844 + 8.96 0.000 intron (NM_001370229, intron 1 of 7) intron (NM_001370229, intron 1 of 7) 1610 NM_001370229 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr1-3940 chr1 98702994 98703204 + 8.96 0.000 intron (NR_033716, intron 8 of 8) L2a|LINE|L2 41378 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr1-16387 chr1 222962677 222962887 + 8.96 0.000 intron (NM_001369594, intron 2 of 7) L1PA8A|LINE|L1 34358 NM_001369594 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr14-4250 chr14 102879075 102879285 + 8.96 0.000 intron (NM_001199427, intron 5 of 7) intron (NM_001199427, intron 5 of 7) -43476 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr16-6685 chr16 70105143 70105353 + 8.96 0.000 Intergenic AluSq2|SINE|Alu -8378 NM_001322118 55066 Hs.744043 NM_017990 ENSG00000090857 PDPR PDP3 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding chr16-4517 chr16 60265764 60265974 + 8.96 0.000 Intergenic L5|LINE|RTE-X 93924 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr3-4097 chr3 105745116 105745326 + 8.96 0.000 intron (NR_135809, intron 6 of 18) intron (NR_135809, intron 6 of 18) 122370 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr9-1994 chr9 126189573 126189783 + 8.96 0.000 Intergenic AluSz|SINE|Alu 86237 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr17-7954 chr17 47640906 47641116 + 8.96 0.000 Intergenic L1ME4c|LINE|L1 -8908 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr5-4290 chr5 149782072 149782282 + 8.96 0.000 intron (NM_001172699, intron 1 of 10) intron (NM_001172699, intron 1 of 10) 10237 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr8-5559 chr8 75503704 75503914 + 8.96 0.000 intron (NM_001330561, intron 3 of 11) Chap1_Mam|DNA|hAT-Charlie -36159 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr16-6805 chr16 79672227 79672437 + 8.96 0.000 Intergenic L2|LINE|L2 -71595 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr3-5950 chr3 45760140 45760350 + 8.96 0.000 intron (NM_022405, intron 8 of 9) intron (NM_022405, intron 8 of 9) 36291 NM_020208 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr2-11797 chr2 16551842 16552052 + 8.96 0.000 3' UTR (NM_030797, exon 12 of 12) 3' UTR (NM_030797, exon 12 of 12) 113887 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr3-10276 chr3 124761273 124761483 + 8.96 0.000 TTS (NM_001354765) TTS (NM_001354765) 28939 NR_036088 100422864 NR_036088 ENSG00000265981 MIR544B - microRNA 544b ncRNA chr6-4962 chr6 104585143 104585353 + 8.96 0.000 Intergenic L2a|LINE|L2 274298 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr17-3754 chr17 30366774 30366984 + 8.96 0.000 Intergenic Intergenic -12048 NM_001304 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr11-6324 chr11 62253940 62254150 + 8.96 0.000 Intergenic HERVK3-int|LTR|ERVK 11806 NM_006551 10647 Hs.204096 NM_006551 ENSG00000124935 SCGB1D2 LIPB|LPHB|LPNB secretoglobin family 1D member 2 protein-coding chr1-6922 chr1 151251743 151251953 + 8.96 0.000 Intergenic Intergenic -2886 NM_001330692 5710 Hs.505059 NM_002810 ENSG00000159352 PSMD4 AF|AF-1|ASF|MCB1|Rpn10|S5A|pUB-R5 proteasome 26S subunit, non-ATPase 4 protein-coding chr3-1555 chr3 8749291 8749501 + 8.96 0.000 Intergenic MER5A|DNA|hAT-Charlie 15594 NM_001234 859 Hs.98303 NM_001234 ENSG00000182533 CAV3 LGMD1C|LQT9|MPDT|RMD2|VIP-21|VIP21 caveolin 3 protein-coding chr2-9323 chr2 224820140 224820350 + 8.96 0.000 intron (NM_001290263, intron 28 of 55) intron (NM_001290263, intron 28 of 55) 126804 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr5-7718 chr5 58647118 58647328 + 8.96 0.000 intron (NM_138453, intron 2 of 4) THE1D|LTR|ERVL-MaLR 64148 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr13-2588 chr13 72903016 72903226 + 8.96 0.000 intron (NR_146206, intron 11 of 16) AluSz|SINE|Alu 120988 NR_146206 10464 Hs.441926 NM_006346 ENSG00000083535 PIBF1 C13orf24|CEP90|JBTS33|PIBF progesterone immunomodulatory binding factor 1 protein-coding chr11-6273 chr11 58960370 58960580 + 8.96 0.000 intron (NR_033853, intron 5 of 5) intron (NR_033853, intron 5 of 5) 17226 NM_080661 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr8-5662 chr8 113727256 113727466 + 8.96 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -290422 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr6-8361 chr6 148912798 148913008 + 8.96 0.000 intron (NM_005715, intron 2 of 7) intron (NM_005715, intron 2 of 7) 51781 NR_038408 100128176 Hs.557541 NR_038408 UST-AS1 - UST antisense RNA 1 ncRNA chr7-6537 chr7 45362006 45362216 + 8.96 0.000 Intergenic Intergenic 204320 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr6-8206 chr6 134995954 134996164 + 8.96 0.000 intron (NM_006620, intron 7 of 17) intron (NM_006620, intron 7 of 17) -16627 NR_037435 100500880 NR_037435 ENSG00000283409 MIR3662 mir-3662 microRNA 3662 ncRNA chr7-3622 chr7 37884580 37884790 + 8.96 0.000 intron (NM_016616, intron 13 of 17) intron (NM_016616, intron 13 of 17) 32132 NM_003014 6424 Hs.658169 NM_003014 ENSG00000106483 SFRP4 FRP-4|FRPHE|FRZB-2|PYL|sFRP-4 secreted frizzled related protein 4 protein-coding chr7-4001 chr7 140241896 140242106 + 8.96 0.000 Intergenic U1|snRNA|snRNA 64740 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr1-3539 chr1 214492876 214493086 + 8.96 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 58621 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr19-5536 chr19 50496737 50496947 + 8.96 0.000 Intergenic Intergenic 14349 NM_138334 126119 Hs.467151 NM_138334 ENSG00000161677 JOSD2 SBBI54 Josephin domain containing 2 protein-coding chr3-6436 chr3 102736414 102736624 + 8.96 0.000 Intergenic HERVL18-int|LTR|ERVL 301504 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr8-6176 chr8 33311129 33311339 + 8.96 0.000 Intergenic Intergenic 161912 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr14-1348 chr14 91946025 91946235 + 8.96 0.000 intron (NM_006329, intron 1 of 10) intron (NM_006329, intron 1 of 10) 1572 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr12-3132 chr12 39061694 39061904 + 8.96 0.000 Intergenic Intergenic -156208 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr4-3307 chr4 163342669 163342879 + 8.96 0.000 Intergenic Intergenic -1073 NM_001317092 4889 Hs.519058 NM_006174 ENSG00000164129 NPY5R NPY5-R|NPYR5|NPYY5-R neuropeptide Y receptor Y5 protein-coding chr1-7164 chr1 207245248 207245458 + 8.96 0.000 Intergenic Intergenic -76325 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chrX-5021 chrX 119400531 119400741 + 8.96 0.000 intron (NM_145305, intron 1 of 4) intron (NM_145305, intron 1 of 4) 1300 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr13-2532 chr13 61280079 61280289 + 8.96 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -80304 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr6-5146 chr6 124776065 124776275 + 8.96 0.000 intron (NM_001040214, intron 4 of 6) intron (NM_001040214, intron 4 of 6) -186375 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chrX-2954 chrX 154918269 154918479 + 8.96 0.000 intron (NM_000132, intron 14 of 25) L1MA4|LINE|L1 -30916 NR_036260 100422977 NR_036260 ENSG00000221603 MIR1184-3 - microRNA 1184-3 ncRNA chr1-15433 chr1 153313008 153313218 + 8.96 0.000 Intergenic Intergenic -2395 NM_052891 114771 Hs.348266 NM_052891 ENSG00000159527 PGLYRP3 PGLYRPIalpha|PGRP-Ialpha|PGRPIA peptidoglycan recognition protein 3 protein-coding chr7-3678 chr7 47659704 47659914 + 8.96 0.000 3' UTR (NM_001123065, exon 3 of 3) 3' UTR (NM_001123065, exon 3 of 3) 4565 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr6-5257 chr6 137148985 137149195 + 8.96 0.000 intron (NM_181309, intron 4 of 5) L2|LINE|L2 24554 NM_181310 116379 Hs.126891 NM_052962 ENSG00000164485 IL22RA2 CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16 interleukin 22 receptor subunit alpha 2 protein-coding chr17-6550 chr17 40587045 40587255 + 8.96 0.000 Intergenic L1PB1|LINE|L1 -21678 NM_001301714 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr6-5316 chr6 143495021 143495231 + 8.96 0.000 3' UTR (NM_032020, exon 7 of 7) 3' UTR (NM_032020, exon 7 of 7) 16594 NM_032020 2519 Hs.17680 NM_032020 ENSG00000001036 FUCA2 dJ20N2.5 alpha-L-fucosidase 2 protein-coding chr12-6962 chr12 27571595 27571805 + 8.96 0.000 intron (NM_003622, intron 1 of 29) intron (NM_003622, intron 1 of 29) 47494 NM_003622 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr2-6468 chr2 164606578 164606788 + 8.96 0.000 intron (NM_004490, intron 2 of 13) intron (NM_004490, intron 2 of 13) 14799 NM_004490 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr10-2525 chr10 47687454 47687664 + 8.96 0.000 Intergenic AluSx|SINE|Alu -2141 NR_027634 439965 Hs.283521 NR_027634 SHLD2P3 FAM35B2|FAM35DP shieldin complex subunit 2 pseudogene 3 pseudo chr20-3405 chr20 40451298 40451508 + 8.96 0.000 Intergenic Intergenic 237833 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr1-9844 chr1 63489103 63489313 + 8.96 0.000 intron (NM_001347145, intron 3 of 7) intron (NM_001347145, intron 3 of 7) 34065 NM_001347145 23421 Hs.166539 NM_014288 ENSG00000142856 ITGB3BP CENP-R|CENPR|HSU37139|NRIF3|TAP20 integrin subunit beta 3 binding protein protein-coding chr7-2519 chr7 45081731 45081941 + 8.96 0.000 exon (NM_001146334, exon 3 of 8) exon (NM_001146334, exon 3 of 8) 7133 NM_001146334 23148 Hs.96633 NM_001146334 ENSG00000136274 NACAD - NAC alpha domain containing protein-coding chr1-13295 chr1 232016811 232017021 + 8.96 0.000 intron (NM_001164537, intron 12 of 13) intron (NM_001164537, intron 12 of 13) 91082 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr11-6126 chr11 39028695 39028905 + 8.96 0.000 Intergenic Intergenic 379942 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr8-4330 chr8 99961593 99961803 + 8.96 0.000 intron (NM_015668, intron 27 of 27) intron (NM_015668, intron 27 of 27) -42884 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr10-7246 chr10 124771635 124771845 + 8.96 0.000 intron (NM_001304468, intron 4 of 5) AluY|SINE|Alu 20147 NM_001304468 399818 Hs.720819 NM_212554 ENSG00000203791 EEF1AKMT2 C10orf138|Efm4|METTL10 EEF1A lysine methyltransferase 2 protein-coding chr16-3234 chr16 85857241 85857451 + 8.96 0.000 Intergenic Intergenic -41816 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr8-3762 chr8 23479919 23480129 + 8.96 0.000 Intergenic Intergenic -22293 NM_001128930 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr1-3724 chr1 222488031 222488241 + 8.96 0.000 Intergenic SVA_D|Retroposon|SVA 59968 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr14-3506 chr14 103094123 103094333 + 8.96 0.000 Intergenic Intergenic -5916 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3 like 4 protein-coding chr16-4682 chr16 79517644 79517854 + 8.96 0.000 Intergenic AluSx1|SINE|Alu 82988 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr1-10753 chr1 200091804 200092014 + 8.96 0.000 intron (NM_205860, intron 5 of 7) intron (NM_205860, intron 5 of 7) 49084 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr8-3683 chr8 17419327 17419537 + 8.96 0.000 Intergenic ERVL-E-int|LTR|ERVL -6081 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr5-3992 chr5 16415076 16415286 + 8.96 0.000 intron (NR_104625, intron 7 of 8) MER90a|LTR|ERV1 25921 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA chr5-2966 chr5 170268778 170268988 + 8.96 0.000 intron (NM_005565, intron 7 of 20) (CA)n|Simple_repeat|Simple_repeat 28894 NM_005565 3937 Hs.304475 NM_005565 ENSG00000043462 LCP2 SLP-76|SLP76 lymphocyte cytosolic protein 2 protein-coding chr20-2772 chr20 52765816 52766026 + 8.96 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 145083 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA chr3-4438 chr3 26707535 26707745 + 8.96 0.000 intron (NM_001317811, intron 2 of 2) intron (NM_001317811, intron 2 of 2) 13083 NM_001317811 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr2-7411 chr2 9266814 9267024 + 8.96 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 60107 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr10-2556 chr10 68308503 68308713 + 8.96 0.000 intron (NM_001033083, intron 1 of 8) AluSz6|SINE|Alu -23085 NM_001322438 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding chr3-7516 chr3 172050100 172050310 + 8.96 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 9674 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr17-5586 chr17 47433010 47433220 + 8.96 0.000 intron (NM_152347, intron 24 of 24) L1MD3|LINE|L1 59505 NR_033934 653479 Hs.537279 NR_033934 MRPL45P2 - mitochondrial ribosomal protein L45 pseudogene 2 pseudo chr10-4438 chr10 70208834 70209044 + 8.96 0.000 intron (NM_021129, intron 8 of 10) AluJb|SINE|Alu 24490 NM_021129 5464 Hs.437403 NM_021129 ENSG00000180817 PPA1 HEL-S-66p|IOPPP|PP|PP1|SID6-8061 pyrophosphatase (inorganic) 1 protein-coding chr10-5586 chr10 91856719 91856929 + 8.96 0.000 intron (NM_025235, intron 23 of 26) intron (NM_025235, intron 23 of 26) 52662 NM_152429 143282 Hs.466120 NM_152429 ENSG00000174721 FGFBP3 C10orf13|FGF-BP3 fibroblast growth factor binding protein 3 protein-coding chr13-1263 chr13 109786408 109786618 + 8.96 0.000 promoter-TSS (NM_003749) promoter-TSS (NM_003749) 70 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr13-2039 chr13 47577927 47578137 + 8.96 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 354590 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr5-7587 chr5 42336441 42336651 + 8.96 0.000 Intergenic L1MA4A|LINE|L1 -86893 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr1-8886 chr1 5561573 5561783 + 8.96 0.000 Intergenic MSTA|LTR|ERVL-MaLR 301063 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr8-4606 chr8 130880718 130880928 + 8.96 0.000 intron (NM_001115, intron 8 of 17) MER94|DNA|hAT-Blackjack 160086 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr9-7324 chr9 12501236 12501446 + 8.96 0.000 Intergenic Intergenic -192044 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr7-3141 chr7 66183716 66183926 + 8.96 0.000 Intergenic Intergenic -21513 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr11-6019 chr11 24857393 24857603 + 8.96 0.000 intron (NM_001252010, intron 5 of 9) intron (NM_001252010, intron 5 of 9) 360445 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr6-4552 chr6 41088692 41088902 + 8.96 0.000 intron (NM_021705, intron 3 of 8) AluSg|SINE|Alu 8990 NM_001329690 221443 Hs.227457 NM_145063 ENSG00000124596 OARD1 C6orf130|TARG1|dJ34B21.3 O-acyl-ADP-ribose deacylase 1 protein-coding chr20-4094 chr20 40691321 40691531 + 8.96 0.000 Intergenic Intergenic -2190 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr7-7568 chr7 121041703 121041913 + 8.96 0.000 intron (NM_001105533, intron 2 of 17) intron (NM_001105533, intron 2 of 17) 52417 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr4-8236 chr4 138899659 138899869 + 8.96 0.000 intron (NR_133945, intron 2 of 2) MER5B|DNA|hAT-Charlie 112882 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr3-3048 chr3 125140552 125140762 + 8.96 0.000 intron (NM_001195483, intron 4 of 12) intron (NM_001195483, intron 4 of 12) 10895 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr1-11225 chr1 246295963 246296173 + 8.96 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 121344 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr2-12167 chr2 39191992 39192202 + 8.96 0.000 intron (NM_001009565, intron 4 of 7) intron (NM_001009565, intron 4 of 7) 37491 NM_001346911 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr14-3039 chr14 58488500 58488710 + 8.96 0.000 intron (NM_001329944, intron 23 of 31) intron (NM_001329944, intron 23 of 31) 48924 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr2-5679 chr2 202221980 202222190 + 8.96 0.000 intron (NR_163943, intron 1 of 5) intron (NR_163943, intron 1 of 5) 16512 NM_001371394 chr12-7717 chr12 91510681 91510891 + 8.96 0.000 Intergenic Intergenic -327969 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chrX-5286 chrX 140960744 140960954 + 8.96 0.000 Intergenic LTR16|LTR|ERVL -34618 NR_031725 100302169 NR_031725 ENSG00000221081 MIR320D2 MIR320D-2|MIRN320D2|hsa-mir-320d-2|mir-320d-2 microRNA 320d-2 ncRNA chr4-2589 chr4 113180084 113180294 + 8.96 0.000 intron (NM_001354275, intron 3 of 43) intron (NM_001354275, intron 3 of 43) 27907 NR_107049 102465878 NR_107049 ENSG00000275810 MIR8082 hsa-mir-8082 microRNA 8082 ncRNA chr7-6403 chr7 154359520 154359730 + 8.96 0.000 intron (NR_157196, intron 1 of 25) L2a|LINE|L2 54466 NM_001936 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr3-5535 chr3 1597950 1598160 + 8.96 0.000 Intergenic L1PA13|LINE|L1 -500748 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr2-8301 chr2 105195881 105196091 + 8.96 0.000 Intergenic Intergenic -45757 NM_007227 11250 Hs.590903 NM_007227 ENSG00000135973 GPR45 PSP24|PSP24(ALPHA)|PSP24A G protein-coupled receptor 45 protein-coding chr20-2477 chr20 32626684 32626894 + 8.96 0.000 Intergenic Intergenic 39310 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr19-3360 chr19 10896506 10896716 + 8.96 0.000 intron (NM_001370089, intron 1 of 14) intron (NM_001370089, intron 1 of 14) 24182 NM_001370089 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr5-5461 chr5 138757336 138757546 + 8.96 0.000 intron (NM_001323982, intron 2 of 18) AluJo|SINE|Alu -3517 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr16-3046 chr16 54812426 54812636 + 8.96 0.000 Intergenic Intergenic 35702 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr1-9258 chr1 24849913 24850123 + 8.96 0.000 Intergenic Intergenic 69398 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr1-6182 chr1 202354714 202354924 + 8.96 0.000 intron (NM_002481, intron 1 of 23) AluSx1|SINE|Alu 6117 NM_001167857 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr3-7767 chr3 68934889 68935099 + 8.96 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -2384 NM_001005527 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr11-5173 chr11 5527331 5527541 + 8.96 0.000 Intergenic Intergenic -5651 NR_133006 101927763 NR_133006 OLFM5P - olfactomedin family member 5, pseudogene pseudo chr2-12421 chr2 56681081 56681291 + 8.96 0.000 Intergenic MIR3|SINE|MIR -495416 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr6-1982 chr6 186769 186979 + 8.96 0.000 intron (NR_126020, intron 4 of 7) intron (NR_126020, intron 4 of 7) 18610 NR_126020 285766 Hs.657946 NR_126020 ENSG00000263667 LOC285766 - uncharacterized LOC285766 ncRNA chr17-6420 chr17 3762095 3762305 + 8.96 0.000 intron (NM_002208, intron 3 of 30) intron (NM_002208, intron 3 of 30) 38297 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr2-7482 chr2 17012279 17012489 + 8.96 0.000 Intergenic MIR3|SINE|MIR -346550 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr6-4891 chr6 91249183 91249393 + 8.96 0.000 Intergenic MER77|LTR|ERVL -272372 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr17-4034 chr17 76966654 76966864 + 8.96 0.000 intron (NR_136416, intron 1 of 2) L2c|LINE|L2 2440 NR_136416 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr6-1346 chr6 37742068 37742278 + 8.96 0.000 Intergenic Intergenic -44290 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr6-3343 chr6 20689107 20689317 + 8.96 0.000 intron (NM_017774, intron 5 of 15) L1MC1|LINE|L1 154755 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr2-6648 chr2 4632639 4632849 + 8.96 0.000 intron (NR_034134, intron 4 of 4) AluY|SINE|Alu 23478 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr15-2301 chr15 69785430 69785640 + 8.96 0.000 Intergenic MLT2A1|LTR|ERVL -49699 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr5-4009 chr5 29775488 29775698 + 8.96 0.000 Intergenic L1MCa|LINE|L1 -104967 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chr10-8526 chr10 92081731 92081941 + 8.96 0.000 intron (NM_001178137, intron 8 of 9) intron (NM_001178137, intron 8 of 9) 158066 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chrX-936 chrX 40096056 40096266 + 8.96 0.000 intron (NM_001123384, intron 1 of 13) CpG 1305 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr3-7937 chr3 155024018 155024228 + 8.96 0.000 promoter-TSS (NM_001354642) promoter-TSS (NM_001354642) -1 NM_001354642 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr8-7275 chr8 130424320 130424530 + 8.96 0.000 intron (NM_001362925, intron 1 of 29) intron (NM_001362925, intron 1 of 29) 19235 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr9-8237 chr9 110116015 110116225 + 8.96 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) -9381 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr4-5364 chr4 186516023 186516233 + 8.96 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -15070 NR_033900 285441 Hs.481369 NR_033900 ENSG00000251165 F11-AS1 - F11 antisense RNA 1 ncRNA chr7-8961 chr7 98820358 98820568 + 8.96 0.000 Intergenic LTR39|LTR|ERV1 49551 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr7-3666 chr7 45486919 45487129 + 8.96 0.000 Intergenic Intergenic -87116 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr1-13058 chr1 175769630 175769840 + 8.96 0.000 Intergenic AluJr|SINE|Alu -26140 NM_001328635 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr8-6405 chr8 56229951 56230161 + 8.96 0.000 Intergenic Intergenic 18267 NM_001011671 79145 Hs.436913 NM_024300 ENSG00000170791 CHCHD7 COX23 coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding chr12-4493 chr12 20726930 20727140 + 8.96 0.000 intron (NM_017435, intron 9 of 14) L1PA16|LINE|L1 31570 NM_017435 53919 Hs.47261 NM_017435 ENSG00000139155 SLCO1C1 OATP-F|OATP1|OATP14|OATP1C1|OATPF|OATPRP5|SLC21A14 solute carrier organic anion transporter family member 1C1 protein-coding chr8-4498 chr8 119452088 119452298 + 8.96 0.000 Intergenic Intergenic 35747 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr16-4740 chr16 84448260 84448470 + 8.96 0.000 intron (NM_001291454, intron 13 of 23) intron (NM_001291454, intron 13 of 23) 18996 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr4-2695 chr4 2689058 2689268 + 8.96 0.000 intron (NM_001256668, intron 11 of 19) intron (NM_001256668, intron 11 of 19) 63731 NM_003704 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr11-7961 chr11 6775436 6775646 + 8.96 0.000 Intergenic AluY|SINE|Alu -6584 NM_001004490 338755 Hs.534614 NM_001004490 ENSG00000188124 OR2AG2 OR11-76|OR2AG2P olfactory receptor family 2 subfamily AG member 2 protein-coding chr17-2918 chr17 44966353 44966563 + 8.96 0.000 intron (NM_006688, intron 1 of 1) intron (NM_006688, intron 1 of 1) 1845 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr9-7379 chr9 18003496 18003706 + 8.96 0.000 Intergenic Intergenic 424535 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr22-2266 chr22 31394386 31394596 + 8.96 0.000 Intergenic Intergenic -5113 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chr18-934 chr18 76521480 76521690 + 8.96 0.000 Intergenic Intergenic -7070 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chrX-2408 chrX 74349607 74349817 + 8.96 0.000 Intergenic LTR53-int|LTR|ERVL 45532 NM_203303 389874 Hs.157231 NM_203303 ENSG00000187969 ZCCHC13 CNBP2|ZNF9L zinc finger CCHC-type containing 13 protein-coding chr20-1059 chr20 17505294 17505504 + 8.96 0.000 intron (NM_001195, intron 5 of 7) MER5A|DNA|hAT-Charlie 25980 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr7-8850 chr7 88173797 88174007 + 8.96 0.000 intron (NM_001324421, intron 26 of 28) intron (NM_001324421, intron 26 of 28) -42758 NR_120517 102723885 Hs.489040 NR_120517 LOC102723885 - uncharacterized LOC102723885 ncRNA chr3-10270 chr3 124380691 124380901 + 8.96 0.000 intron (NM_001024660, intron 10 of 59) intron (NM_001024660, intron 10 of 59) 6464 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr7-5347 chr7 29373321 29373531 + 8.96 0.000 intron (NM_001293072, intron 3 of 12) AluSx|SINE|Alu -106286 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr2-13434 chr2 142991040 142991250 + 8.96 0.000 intron (NM_001199241, intron 11 of 14) intron (NM_001199241, intron 11 of 14) 113481 NM_003937 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr5-2882 chr5 96510070 96510280 + 8.96 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -76927 NM_000439 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr13-2006 chr13 35260497 35260707 + 8.96 0.000 intron (NM_015678, intron 34 of 57) L1ME1|LINE|L1 216087 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr15-3584 chr15 49015771 49015981 + 8.96 0.000 intron (NM_001193489, intron 11 of 17) L2a|LINE|L2 30570 NM_001193489 9728 Hs.9997 NM_014701 ENSG00000138593 SECISBP2L SBP2L|SLAN SECIS binding protein 2 like protein-coding chr20-3184 chr20 45974793 45975003 + 8.96 0.000 Intergenic AluJr|SINE|Alu -2695 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding chr2-14241 chr2 211688137 211688347 + 8.96 0.000 intron (NM_001042599, intron 12 of 26) L1MD1|LINE|L1 738118 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr12-4262 chr12 117085441 117085651 + 8.96 0.000 intron (NR_031766, intron 1 of 7) intron (NR_031766, intron 1 of 7) 13870 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr17-5778 chr17 62148937 62149147 + 8.96 0.000 Intergenic Intergenic -83764 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr8-2930 chr8 18720723 18720933 + 8.96 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 88039 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr15-2458 chr15 80634069 80634279 + 8.96 0.000 Intergenic LTR33A_|LTR|ERVL 53071 NR_049837 100847042 NR_049837 ENSG00000284059 MIR5572 - microRNA 5572 ncRNA chr14-2783 chr14 20512468 20512678 + 8.96 0.000 Intergenic Intergenic 2101 NM_001012975 338879 Hs.451057 NM_001012975 ENSG00000182545 RNASE10 RAH1|RNASE9 ribonuclease A family member 10 (inactive) protein-coding chr19-4531 chr19 8548212 8548422 + 8.96 0.000 exon (NM_001348355, exon 11 of 28) exon (NM_001348355, exon 11 of 28) 29125 NM_012335 4542 Hs.465818 NM_012335 ENSG00000142347 MYO1F - myosin IF protein-coding chr12-7537 chr12 70205584 70205794 + 8.96 0.000 Intergenic Intergenic -37341 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr20-3639 chr20 9203385 9203595 + 8.96 0.000 intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) -13900 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr8-4793 chr8 144623453 144623663 + 8.96 0.000 intron (NM_001308208, intron 1 of 10) intron (NM_001308208, intron 1 of 10) -10055 NM_001308207 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr1-7699 chr1 22902873 22903083 + 8.96 0.000 intron (NM_004442, intron 9 of 15) L2b|LINE|L2 -39752 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr11-3534 chr11 12771709 12771919 + 8.96 0.000 intron (NM_021961, intron 3 of 12) L4_A_Mam|LINE|RTE-X 97393 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr5-5037 chr5 87169088 87169298 + 8.96 0.000 intron (NR_105018, intron 2 of 3) intron (NR_105018, intron 2 of 3) 49045 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr11-3525 chr11 6992017 6992227 + 8.96 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 28224 NM_001354830 7761 Hs.445849 NM_013249 ENSG00000149050 ZNF214 BAZ-1|BAZ1 zinc finger protein 214 protein-coding chr14-3909 chr14 100608183 100608393 + 8.96 0.000 Intergenic L3|LINE|CR1 -38496 NM_020836 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr3-10232 chr3 122706497 122706707 + 8.96 0.000 intron (NM_017554, intron 8 of 16) MER102b|DNA|hAT-Charlie 25763 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr3-5503 chr3 194996112 194996322 + 8.96 0.000 Intergenic Intergenic -98371 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr5-5016 chr5 83924203 83924413 + 8.96 0.000 Intergenic Intergenic -203453 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr5-4060 chr5 54910504 54910714 + 8.96 0.000 Intergenic Intergenic 74984 NM_001135604 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr8-2327 chr8 3962269 3962479 + 8.96 0.000 intron (NM_033225, intron 5 of 69) intron (NM_033225, intron 5 of 69) 1032540 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr10-6125 chr10 132894947 132895157 + 8.96 0.000 intron (NM_001200049, intron 24 of 57) L1M4|LINE|L1 47518 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr6-4604 chr6 44333988 44334198 + 8.96 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -8567 NM_145026 221409 Hs.135283 NM_145026 ENSG00000249481 SPATS1 DDIP|SPATA8|SRSP1 spermatogenesis associated serine rich 1 protein-coding chr10-2353 chr10 85824611 85824821 + 8.96 0.000 intron (NM_017551, intron 8 of 15) L1PB3|LINE|L1 246985 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr5-2406 chr5 108561503 108561713 + 8.96 0.000 Intergenic Intergenic 166653 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr14-2651 chr14 69254226 69254436 + 8.96 0.000 Intergenic AluJr4|SINE|Alu -5827 NM_001168368 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr9-4086 chr9 126672001 126672211 + 8.96 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 57663 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr3-5028 chr3 31496034 31496244 + 8.96 0.000 Intergenic Intergenic -36786 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr8-4033 chr8 60525382 60525592 + 8.96 0.000 intron (NM_001242644, intron 1 of 6) intron (NM_001242644, intron 1 of 6) 8500 NM_002865 5862 Hs.369017 NM_002865 ENSG00000104388 RAB2A LHX|RAB2 RAB2A, member RAS oncogene family protein-coding chr3-9799 chr3 73024832 73025042 + 8.96 0.000 intron (NM_001318025, intron 2 of 7) intron (NM_001318025, intron 2 of 7) 28126 NM_001318027 151987 Hs.431092 NM_174907 ENSG00000163605 PPP4R2 PP4R2 protein phosphatase 4 regulatory subunit 2 protein-coding chr2-7538 chr2 22585988 22586198 + 8.96 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 49614 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr1-8255 chr1 33459903 33460113 + 8.96 0.000 Intergenic L2|LINE|L2 -12637 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr7-6867 chr7 50220712 50220922 + 8.96 0.000 Intergenic (CACTCC)n|Simple_repeat|Simple_repeat -83247 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr16-6407 chr16 55403648 55403858 + 8.96 0.000 Intergenic Intergenic 58544 NR_147198 107984884 Hs.666473 NR_147198 MMP2-AS1 - MMP2 antisense RNA 1 ncRNA chr1-13242 chr1 219342598 219342808 + 8.96 0.000 Intergenic Intergenic 167734 NM_001300772 127018 Hs.657617 NM_138794 ENSG00000143353 LYPLAL1 Q96AV0 lysophospholipase like 1 protein-coding chr4-6884 chr4 12892199 12892409 + 8.96 0.000 Intergenic Intergenic 592036 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr12-2260 chr12 93050336 93050546 + 8.96 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -121146 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr5-2746 chr5 138752583 138752793 + 8.96 0.000 promoter-TSS (NM_001290307) promoter-TSS (NM_001290307) 621 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr5-8056 chr5 92789556 92789766 + 8.96 0.000 Intergenic Intergenic 781682 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr17-8238 chr17 65306259 65306469 + 8.96 0.000 Intergenic Intergenic -151177 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr20-1246 chr20 36468479 36468689 + 8.96 0.000 intron (NM_183006, intron 1 of 6) intron (NM_183006, intron 1 of 6) 6789 NM_183006 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr22-2840 chr22 44173885 44174095 + 8.96 0.000 intron (NM_001137605, intron 1 of 13) intron (NM_001137605, intron 1 of 13) 1034 NM_001137605 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr22-2858 chr22 44805541 44805751 + 8.96 0.000 intron (NM_181335, intron 3 of 11) MER91B|DNA|hAT-Tip100 53088 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr16-3516 chr16 24024657 24024867 + 8.96 0.000 intron (NM_002738, intron 3 of 16) MLT1O|LTR|ERVL-MaLR -178354 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr6-7463 chr6 56657427 56657637 + 8.96 0.000 intron (NM_001144770, intron 7 of 94) intron (NM_001144770, intron 7 of 94) -14643 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr7-2674 chr7 10940207 10940417 + 8.96 0.000 promoter-TSS (NM_002489) promoter-TSS (NM_002489) -159 NM_002489 4697 Hs.50098 NM_002489 ENSG00000189043 NDUFA4 CI-9k|CI-MLRQ|COXFA4|MLRQ NDUFA4 mitochondrial complex associated protein-coding chr22-3191 chr22 35958281 35958491 + 8.96 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) 3244 NM_001349991 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr5-7304 chr5 14702421 14702631 + 8.96 0.000 Intergenic Intergenic -10168 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr2-12986 chr2 105675000 105675210 + 8.96 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 -64546 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chr10-3656 chr10 100506663 100506873 + 8.96 0.000 intron (NM_015490, intron 7 of 25) intron (NM_015490, intron 7 of 25) 13093 NM_015490 25956 Hs.18889 NM_015490 ENSG00000075826 SEC31B SEC31B-1|SEC31L2 SEC31 homolog B, COPII coat complex component protein-coding chr1-8710 chr1 228185685 228185895 + 8.96 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger 11220 NM_001310327 200205 Hs.237017 NM_001010867 ENSG00000181873 IBA57 C1orf69|MMDS3|SPG74 iron-sulfur cluster assembly factor IBA57 protein-coding chr2-7408 chr2 9085213 9085423 + 8.96 0.000 Intergenic AluJb|SINE|Alu -81634 NM_001321267 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr15-3924 chr15 37598963 37599173 + 8.96 0.000 Intergenic Intergenic -335539 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr1-12836 chr1 92520404 92520614 + 8.96 0.000 intron (NM_001350198, intron 19 of 19) HAL1|LINE|L1 -33584 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr17-5887 chr17 72172216 72172426 + 8.96 0.000 Intergenic Intergenic 51301 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box transcription factor 9 protein-coding chr6-5117 chr6 120575187 120575397 + 8.96 0.000 Intergenic AluY|SINE|Alu 560113 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr8-4139 chr8 74921310 74921520 + 8.96 0.000 Intergenic Intergenic -63090 NM_031461 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr3-7750 chr3 61602193 61602403 + 8.96 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 40727 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr8-1301 chr8 81591064 81591274 + 8.96 0.000 Intergenic Intergenic 40108 NR_146081 650747 NR_146081 IMPA1P1 IMPA1P inositol monophosphatase 1 pseudogene 1 pseudo chr4-1159 chr4 152269179 152269389 + 8.96 0.000 Intergenic AluJr|SINE|Alu -68371 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr11-3459 chr11 69322000 69322210 + 8.96 0.000 Intergenic Intergenic 27950 NM_001293294 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr11-5546 chr11 95863964 95864174 + 8.96 0.000 intron (NM_001243571, intron 6 of 17) L2|LINE|L2 60038 NM_201281 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr10-3538 chr10 74778490 74778700 + 8.96 0.000 Intergenic LTR18B|LTR|ERVL -46660 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr1-5399 chr1 9486712 9486922 + 8.96 0.000 Intergenic Intergenic -52648 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr20-2247 chr20 1440827 1441037 + 8.96 0.000 Intergenic Intergenic 26760 NR_038164 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding chr13-1019 chr13 40476704 40476914 + 8.96 0.000 intron (NR_024505, intron 1 of 6) MamTip2|DNA|hAT-Tip100 4197 NR_024506 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr15-3400 chr15 89171629 89171839 + 8.96 0.000 intron (NM_007011, intron 9 of 14) intron (NM_007011, intron 9 of 14) 49845 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chr1-8755 chr1 17395 17605 + 8.96 0.000 promoter-TSS (NR_106918) promoter-TSS (NR_106918) -64 NR_106918 102466751 NR_106918 ENSG00000278267 MIR6859-1 hsa-mir-6859-1 microRNA 6859-1 ncRNA chr3-4824 chr3 138609135 138609345 + 8.96 0.000 intron (NM_018147, intron 1 of 4) CpG 191 NM_018147 55179 Hs.173438 NM_018147 ENSG00000158234 FAIM FAIM1 Fas apoptotic inhibitory molecule protein-coding chr11-9881 chr11 74337259 74337469 + 8.96 0.000 intron (NM_173582, intron 13 of 13) MARNA|DNA|TcMar-Mariner -25724 NM_001288748 283208 Hs.660541 NM_182904 ENSG00000149380 P4HA3 - prolyl 4-hydroxylase subunit alpha 3 protein-coding chr10-5212 chr10 62067947 62068157 + 8.96 0.000 intron (NM_001244638, intron 4 of 6) intron (NM_001244638, intron 4 of 6) 18695 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr2-6414 chr2 138106448 138106658 + 8.96 0.000 TTS (NR_135526) TTS (NR_135526) 4669 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr12-2744 chr12 30762379 30762589 + 8.96 0.000 intron (NR_135046, intron 1 of 1) AluY|SINE|Alu 7410 NR_135046 645485 Hs.232332 NR_135046 ENSG00000246331 LOC645485 - uncharacterized LOC645485 ncRNA chr6-7053 chr6 26505226 26505436 + 8.96 0.000 intron (NM_001732, intron 4 of 7) intron (NM_001732, intron 4 of 7) 5028 NM_001732 696 Hs.153058 NM_001732 ENSG00000124557 BTN1A1 BT|BTN|BTN1 butyrophilin subfamily 1 member A1 protein-coding chr2-8914 chr2 181577448 181577658 + 8.96 0.000 intron (NR_027690, intron 2 of 11) L2c|LINE|L2 79552 NM_201548 375298 Hs.732358 NM_201548 ENSG00000188452 CERKL RP26 ceramide kinase like protein-coding chr1-15321 chr1 119370249 119370459 + 8.96 0.000 TTS (NR_046780) TTS (NR_046780) 1408 NR_046780 100874270 NR_046780 ENSG00000230921 HAO2-IT1 - HAO2 intronic transcript 1 ncRNA chr16-6960 chr16 86037775 86037985 + 8.96 0.000 Intergenic Intergenic 119533 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr13-2747 chr13 97878625 97878835 + 8.96 0.000 Intergenic Intergenic -74945 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr6-4758 chr6 71753117 71753327 + 8.96 0.000 Intergenic HERVH-int|LTR|ERV1 -133481 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr11-10727 chr11 131718258 131718468 + 8.96 0.000 intron (NM_001352006, intron 2 of 9) L1ME1|LINE|L1 -54807 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr12-3320 chr12 84937857 84938067 + 8.96 0.000 Intergenic L1MA2|LINE|L1 -25133 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr6-1502 chr6 145116468 145116678 + 8.96 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 570304 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr8-7356 chr8 135899706 135899916 + 8.96 0.000 Intergenic MER1B|DNA|hAT-Charlie 442355 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr13-2388 chr13 41780665 41780875 + 8.96 0.000 intron (NM_001009814, intron 19 of 25) L2|LINE|L2 180315 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr9-3743 chr9 121447216 121447426 + 8.96 0.000 Intergenic Intergenic 52706 NR_045211 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr5-5166 chr5 109533064 109533274 + 8.96 0.000 Intergenic Intergenic -123195 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr1-10160 chr1 109827880 109828090 + 8.96 0.000 Intergenic Intergenic -64062 NM_001319952 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr7-3542 chr7 11597369 11597579 + 8.96 0.000 intron (NM_015204, intron 2 of 26) HERVL-int|LTR|ERVL 234724 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr3-5172 chr3 63248193 63248403 + 8.96 0.000 Intergenic MIRb|SINE|MIR -30010 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr4-6380 chr4 110184110 110184320 + 8.96 0.000 intron (NM_001130721, intron 2 of 4) intron (NM_001130721, intron 2 of 4) 14400 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr4-4696 chr4 86977891 86978101 + 8.96 0.000 intron (NM_001166693, intron 2 of 20) intron (NM_001166693, intron 2 of 20) -28992 NM_001313960 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr16-4827 chr16 87355938 87356148 + 8.96 0.000 intron (NM_024735, intron 2 of 8) AluSx1|SINE|Alu 27733 NM_024735 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr1-6416 chr1 13751716 13751926 + 8.96 0.000 intron (NM_001135610, intron 6 of 7) intron (NM_001135610, intron 6 of 7) 2406 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr9-4699 chr9 126002479 126002689 + 8.96 0.000 Intergenic Intergenic 254401 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr16-4691 chr16 80586499 80586709 + 8.96 0.000 Intergenic MIRb|SINE|MIR -13796 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr3-2939 chr3 56335865 56336075 + 8.96 0.000 intron (NR_132749, intron 2 of 17) (TAAA)n|Simple_repeat|Simple_repeat 132497 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chrX-2839 chrX 138230879 138231089 + 8.96 0.000 Intergenic L1PA6|LINE|L1 436809 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr10-6049 chr10 127905423 127905633 + 8.96 0.000 Intergenic Intergenic -1575 NM_006504 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr13-1531 chr13 26185840 26186050 + 8.96 0.000 intron (NM_183045, intron 5 of 5) L2a|LINE|L2 35812 NM_183044 6049 Hs.136885 NM_005977 ENSG00000127870 RNF6 - ring finger protein 6 protein-coding chr18-2202 chr18 62282279 62282489 + 8.96 0.000 exon (NM_001346231, exon 25 of 29) exon (NM_001346231, exon 25 of 29) -42903 NM_001270950 8792 Hs.204044 NM_003839 ENSG00000141655 TNFRSF11A CD265|FEO|LOH18CR1|ODFR|OFE|OPTB7|OSTS|PDB2|RANK|TRANCER TNF receptor superfamily member 11a protein-coding chrX-957 chrX 98074488 98074698 + 8.96 0.000 Intergenic Intergenic -510058 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr10-5375 chr10 73953851 73954061 + 8.96 0.000 Intergenic Intergenic -31179 NR_160937 414236 Hs.585453 NM_001001791 ENSG00000222047 C10orf55 - chromosome 10 open reading frame 55 ncRNA chr1-11534 chr1 161792226 161792436 + 8.96 0.000 intron (NM_007348, intron 6 of 15) intron (NM_007348, intron 6 of 15) 26011 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chr15-1584 chr15 75721918 75722128 + 8.96 0.000 Intergenic Intergenic -2018 NM_175881 161753 Hs.144348 NM_175881 ENSG00000182950 ODF3L1 - outer dense fiber of sperm tails 3 like 1 protein-coding chr7-7368 chr7 57367556 57367766 + 8.96 0.000 Intergenic Intergenic -37106 NR_120505 100653233 Hs.127379 NR_120505 ENSG00000260653 LOC100653233 - uncharacterized LOC100653233 ncRNA chr3-6812 chr3 146045467 146045677 + 8.96 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 23613 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr17-2666 chr17 30341794 30342004 + 8.96 0.000 Intergenic MER63A|DNA|hAT-Blackjack -7842 NM_001319942 388364 Hs.371005 NM_206832 ENSG00000182271 TMIGD1 TMIGD|UNQ9372 transmembrane and immunoglobulin domain containing 1 protein-coding chr11-5913 chr11 14012865 14013075 + 8.96 0.000 intron (NM_006108, intron 2 of 15) intron (NM_006108, intron 2 of 15) 50247 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr13-3785 chr13 45079347 45079557 + 8.96 0.000 Intergenic Intergenic -26827 NR_120424 101929259 Hs.638490 NR_120424 LOC101929259 - uncharacterized LOC101929259 ncRNA chr1-11554 chr1 179116955 179117165 + 8.96 0.000 intron (NM_007314, intron 8 of 11) AluSz|SINE|Alu 26016 NM_001136000 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr9-3765 chr9 124742856 124743066 + 8.96 0.000 intron (NM_001278546, intron 1 of 9) intron (NM_001278546, intron 1 of 9) 28350 NM_001489 2649 Hs.20131 NM_001489 ENSG00000148200 NR6A1 CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR nuclear receptor subfamily 6 group A member 1 protein-coding chr3-5216 chr3 79881515 79881725 + 8.96 0.000 Intergenic Intergenic -113622 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr15-3841 chr15 81221606 81221816 + 8.96 0.000 intron (NM_001352686, intron 1 of 18) intron (NM_001352686, intron 1 of 18) 22235 NM_001352686 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding chr20-3263 chr20 3102914 3103124 + 8.96 0.000 Intergenic Intergenic -3892 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chr9-4963 chr9 17715892 17716102 + 8.96 0.000 intron (NM_003026, intron 1 of 8) MER47A|DNA|TcMar-Tigger 136931 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr2-5262 chr2 58620110 58620320 + 8.96 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 99462 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr6-5493 chr6 163355605 163355815 + 8.96 0.000 Intergenic Intergenic -8677 NR_033862 401282 Hs.444817 NR_033862 ENSG00000285564 DKFZp451B082 - uncharacterized LOC401282 ncRNA chr16-6523 chr16 62666053 62666263 + 8.96 0.000 Intergenic Intergenic -629720 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr9-3462 chr9 3660904 3661114 + 8.96 0.000 Intergenic Intergenic -7077 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chr5-5083 chr5 96514722 96514932 + 8.96 0.000 intron (NR_130776, intron 4 of 4) AluSz6|SINE|Alu -81579 NM_000439 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr9-4259 chr9 95039944 95040154 + 8.96 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -25301 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr2-5671 chr2 201258445 201258655 + 8.96 0.000 intron (NR_111983, intron 1 of 8) intron (NR_111983, intron 1 of 8) 515 NM_001080125 841 Hs.599762 NM_001228 ENSG00000064012 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8 protein-coding chr12-4995 chr12 79075688 79075898 + 8.96 0.000 intron (NM_005639, intron 3 of 10) intron (NM_005639, intron 3 of 10) 30101 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr16-3964 chr16 87869134 87869344 + 8.96 0.000 exon (NM_003486, exon 1 of 10) exon (NM_003486, exon 1 of 10) 268 NM_003486 8140 Hs.513797 NM_003486 ENSG00000103257 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16 solute carrier family 7 member 5 protein-coding chr2-11325 chr2 200337568 200337778 + 8.96 0.000 intron (NM_001282743, intron 2 of 11) intron (NM_001282743, intron 2 of 11) 28723 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr2-14592 chr2 232450101 232450311 + 8.84 0.000 Intergenic Intergenic -5947 NM_001631 248 Hs.37009 NM_001631 ENSG00000163295 ALPI IAP alkaline phosphatase, intestinal protein-coding chr8-1467 chr8 19792025 19792235 + 8.84 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -25019 NM_001353511 55174 Hs.512627 NM_018142 ENSG00000104613 INTS10 C8orf35|INT10 integrator complex subunit 10 protein-coding chr2-6975 chr2 130931484 130931694 + 8.84 0.000 intron (NM_001367493, intron 3 of 13) intron (NM_001367493, intron 3 of 13) 94675 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr15-2724 chr15 95300960 95301170 + 8.84 0.000 intron (NR_034095, intron 1 of 3) intron (NR_034095, intron 1 of 3) 26035 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr6-4059 chr6 136490781 136490991 + 8.84 0.000 intron (NM_001198617, intron 1 of 15) intron (NM_001198617, intron 1 of 15) -24011 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr1-9576 chr1 43011939 43012149 + 8.84 0.000 Intergenic MER39|LTR|ERV1 52995 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr13-3264 chr13 38763938 38764148 + 8.84 0.000 intron (NM_207361, intron 2 of 23) intron (NM_207361, intron 2 of 23) 63548 NR_146963 100874073 Hs.253994 NR_146963 FREM2-AS1 - FREM2 antisense RNA 1 ncRNA chr16-2440 chr16 82543990 82544200 + 8.84 0.000 Intergenic Intergenic -82874 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr16-5334 chr16 82248968 82249178 + 8.84 0.000 Intergenic Intergenic -78849 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr14-2694 chr14 80954923 80955133 + 8.84 0.000 promoter-TSS (NM_001018036) promoter-TSS (NM_001018036) -593 NM_001018036 7253 Hs.160411 NM_000369 ENSG00000165409 TSHR CHNG1|LGR3|hTSHR-I thyroid stimulating hormone receptor protein-coding chr17-4489 chr17 67304265 67304475 + 8.84 0.000 Intergenic Intergenic -59174 NM_001330447 9931 Hs.370140 NM_014877 ENSG00000198265 HELZ DHRC|DRHC|HUMORF5 helicase with zinc finger protein-coding chr7-8015 chr7 17677753 17677963 + 8.84 0.000 Intergenic L2c|LINE|L2 -118949 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr20-3973 chr20 35127189 35127399 + 8.84 0.000 intron (NM_001145025, intron 6 of 9) THE1B|LTR|ERVL-MaLR 20042 NM_018217 55741 Hs.720177 NM_018217 ENSG00000088298 EDEM2 C20orf31|C20orf49|bA4204.1 ER degradation enhancing alpha-mannosidase like protein 2 protein-coding chr12-6992 chr12 30538528 30538738 + 8.84 0.000 Intergenic AluSx3|SINE|Alu 138611 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr7-7058 chr7 148650958 148651168 + 8.84 0.000 Intergenic AluSg7|SINE|Alu -46693 NM_001370660 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr22-3209 chr22 38344182 38344392 + 8.84 0.000 TTS (NR_002821) TTS (NR_002821) -26203 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chrX-2921 chrX 152635964 152636174 + 8.84 0.000 Intergenic Intergenic -1826 NM_018558 55879 Hs.283081 NM_018558 ENSG00000268089 GABRQ THETA gamma-aminobutyric acid type A receptor theta subunit protein-coding chr1-15343 chr1 121463159 121463369 + 8.84 0.000 Intergenic THE1B|LTR|ERVL-MaLR -55848 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo chr5-3989 chr5 15959653 15959863 + 8.84 0.000 Intergenic UCON85|Unknown|Unknown 24576 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr6-2779 chr6 135088828 135089038 + 8.84 0.000 Intergenic MER63A|DNA|hAT-Blackjack -34111 NM_001145158 10767 Hs.378532 NM_006620 ENSG00000112339 HBS1L EF-1a|ERFS|HBS1|HSPC276|eRF3c HBS1 like translational GTPase protein-coding chr14-3725 chr14 27465176 27465386 + 8.84 0.000 intron (NR_148991, intron 2 of 2) MER110|LTR|ERV1 -147307 NR_039992 100505967 Hs.668484 NR_039992 ENSG00000258548 LINC00645 - long intergenic non-protein coding RNA 645 ncRNA chr11-9031 chr11 26542458 26542668 + 8.84 0.000 intron (NM_031418, intron 11 of 26) LTR33A|LTR|ERVL 29700 NM_145650 143662 Hs.407152 NM_145650 ENSG00000169550 MUC15 MUC-15|PAS3|PASIII mucin 15, cell surface associated protein-coding chr2-12388 chr2 54183991 54184201 + 8.84 0.000 intron (NM_138448, intron 3 of 3) Zaphod|DNA|hAT-Tip100 60813 NM_001320588 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr10-8968 chr10 119112235 119112445 + 8.84 0.000 intron (NM_001303113, intron 3 of 7) intron (NM_001303113, intron 3 of 7) 8227 NR_130122 404636 Hs.434241 NM_207009 ENSG00000119979 DENND10 FAM45A DENN domain containing 10 protein-coding chr3-5714 chr3 15639070 15639280 + 8.84 0.000 intron (NM_001281725, intron 2 of 3) intron (NM_001281725, intron 2 of 3) 37206 NM_001281725 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr18-2751 chr18 80161871 80162081 + 8.84 0.000 intron (NM_032510, intron 2 of 2) intron (NM_032510, intron 2 of 2) 14052 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr2-11585 chr2 1832734 1832944 + 8.84 0.000 intron (NM_015025, intron 21 of 24) intron (NM_015025, intron 21 of 24) -88324 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr9-3954 chr9 136605030 136605240 + 8.84 0.000 Intergenic Intergenic 12046 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr4-3020 chr4 128386918 128387128 + 8.84 0.000 Intergenic Intergenic -40993 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr13-3121 chr13 75062820 75063030 + 8.84 0.000 Intergenic AluSp|SINE|Alu 177456 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chrX-3783 chrX 133696884 133697094 + 8.84 0.000 intron (NM_001164619, intron 3 of 6) intron (NM_001164619, intron 3 of 6) -200454 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr1-5789 chr1 171805783 171805993 + 8.84 0.000 Intergenic Intergenic 24228 NM_015935 51603 Hs.494705 NM_014955 ENSG00000010165 EEF1AKNMT 5630401D24Rik|CGI-01|DFNB26|DFNB26M|KIAA0859|METTL13|feat eEF1A lysine and N-terminal methyltransferase protein-coding chr17-5025 chr17 1253700 1253910 + 8.84 0.000 Intergenic Intergenic -16759 NM_001164405 727857 Hs.723790 NM_001164405 ENSG00000205899 BHLHA9 BHLHF42|CCSPD basic helix-loop-helix family member a9 protein-coding chr1-4387 chr1 162789294 162789504 + 8.84 0.000 Intergenic PABL_A|LTR|ERV1 -1303 NM_001304512 51478 Hs.492925 NM_016371 ENSG00000132196 HSD17B7 PRAP|SDR37C1 hydroxysteroid 17-beta dehydrogenase 7 protein-coding chr14-3120 chr14 67352981 67353191 + 8.84 0.000 intron (NM_015994, intron 1 of 8) intron (NM_015994, intron 1 of 8) 6718 NM_015994 51382 Hs.272630 NM_015994 ENSG00000100554 ATP6V1D ATP6M|VATD|VMA8 ATPase H+ transporting V1 subunit D protein-coding chr6-8171 chr6 132547547 132547757 + 8.84 0.000 Intergenic AluSx1|SINE|Alu -5032 NM_053278 83551 Hs.350571 NM_053278 ENSG00000146385 TAAR8 GPR102|TA5|TAR5|TRAR5|TaR-5|TaR-8 trace amine associated receptor 8 protein-coding chr14-4257 chr14 103856394 103856604 + 8.84 0.000 non-coding (NR_038436, exon 3 of 3) non-coding (NR_038436, exon 3 of 3) 8778 NR_038436 145216 Hs.578091 NR_038436 ENSG00000258735 LINC00637 - long intergenic non-protein coding RNA 637 ncRNA chr11-4500 chr11 113729687 113729897 + 8.84 0.000 Intergenic L2a|LINE|L2 -23419 NM_001288751 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding chr13-1664 chr13 74257111 74257321 + 8.84 0.000 non-coding (NR_144451, exon 2 of 2) non-coding (NR_144451, exon 2 of 2) 25772 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr6-1986 chr6 3612743 3612953 + 8.84 0.000 Intergenic Intergenic 139164 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr16-3318 chr16 1223029 1223239 + 8.84 0.000 intron (NM_012467, intron 3 of 5) intron (NM_012467, intron 3 of 5) 2134 NM_012467 25823 Hs.592076 NM_012467 ENSG00000116176 TPSG1 PRSS31|TMT|trpA tryptase gamma 1 protein-coding chr3-5906 chr3 40299816 40300026 + 8.84 0.000 intron (NR_033965, intron 2 of 2) MSTD|LTR|ERVL-MaLR 9777 NR_033965 440952 Hs.660388 NR_033965 ENSG00000280739 EIF1B-AS1 - EIF1B antisense RNA 1 ncRNA chr10-4807 chr10 8390597 8390807 + 8.84 0.000 Intergenic (GGATTG)n|Simple_repeat|Simple_repeat -122397 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chrX-2974 chrX 24828930 24829140 + 8.84 0.000 intron (NM_016937, intron 32 of 36) intron (NM_016937, intron 32 of 36) 84594 NR_003007 677773 Hs.689695 NR_003007 ENSG00000251869 SCARNA23 ACA12 small Cajal body-specific RNA 23 ncRNA chr7-4317 chr7 32853948 32854158 + 8.84 0.000 Intergenic MIRb|SINE|MIR 27751 NR_132360 102724668 Hs.636806 NR_132360 DPY19L1P2 THC1072510 DPY19L1 pseudogene 2 pseudo chr6-5423 chr6 156871163 156871373 + 8.84 0.000 intron (NM_017519, intron 2 of 18) L2a|LINE|L2 -91537 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr12-4012 chr12 30366707 30366917 + 8.84 0.000 Intergenic L1P2|LINE|L1 310432 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr1-3977 chr1 154850242 154850452 + 8.84 0.000 intron (NM_001204087, intron 1 of 8) intron (NM_001204087, intron 1 of 8) 9529 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr5-8978 chr5 162076591 162076801 + 8.84 0.000 intron (NM_198904, intron 1 of 9) intron (NM_198904, intron 1 of 9) 9054 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding chr1-8016 chr1 225095260 225095470 + 8.84 0.000 intron (NM_001367479, intron 21 of 85) L1PA15|LINE|L1 165690 NM_001367481 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr11-3895 chr11 109971260 109971470 + 8.84 0.000 Intergenic Intergenic -122027 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr17-6202 chr17 3918949 3919159 + 8.84 0.000 Intergenic Intergenic -2589 NM_002558 5023 Hs.41735 NM_002558 ENSG00000108405 P2RX1 P2X1 purinergic receptor P2X 1 protein-coding chr20-2295 chr20 5056877 5057087 + 8.84 0.000 Intergenic LTR16A1|LTR|ERVL -46669 NM_203327 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr1-6711 chr1 57381567 57381777 + 8.84 0.000 intron (NM_001353980, intron 4 of 5) intron (NM_001353980, intron 4 of 5) 41440 NM_001365793 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr20-3809 chr20 23503705 23503915 + 8.84 0.000 Intergenic L2|LINE|L2 12693 NM_001281730 10047 Hs.121602 NM_005492 ENSG00000125815 CST8 CRES|CTES5 cystatin 8 protein-coding chr17-5694 chr17 51411458 51411668 + 8.84 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -23864 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr10-6150 chr10 133602285 133602495 + 8.84 0.000 Intergenic L1MDa|LINE|L1 24405 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family member B protein-coding chr13-1923 chr13 72585096 72585306 + 8.84 0.000 Intergenic Intergenic 142428 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr21-239 chr21 43865672 43865882 + 8.84 0.000 intron (NM_001369878, intron 1 of 8) CpG 554 NM_001369878 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr10-1843 chr10 47025223 47025433 + 8.84 0.000 Intergenic MIRb|SINE|MIR 113606 NM_001352533 26095 Hs.440733 NM_015605 ENSG00000204179 PTPN20 CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 protein tyrosine phosphatase non-receptor type 20 protein-coding chr16-3499 chr16 10140696 10140906 + 8.84 0.000 intron (NM_001134408, intron 2 of 13) MLT1K|LTR|ERVL-MaLR 41266 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr17-2632 chr17 4899126 4899336 + 8.84 0.000 promoter-TSS (NM_001145536) promoter-TSS (NM_001145536) -305 NM_001145536 100130311 Hs.579243 NM_001145536 ENSG00000205710 C17orf107 - chromosome 17 open reading frame 107 protein-coding chr4-8120 chr4 126661278 126661488 + 8.84 0.000 Intergenic MER44C|DNA|TcMar-Tigger -971574 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr1-15526 chr1 156931481 156931691 + 8.84 0.000 intron (NM_144702, intron 12 of 14) L2c|LINE|L2 4658 NR_030527 768220 NR_030527 ENSG00000211581 MIR765 MIRN765|hsa-mir-765|mir-765 microRNA 765 ncRNA chr3-6298 chr3 74624303 74624513 + 8.84 0.000 Intergenic MER45B|DNA|hAT-Tip100 -103268 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr19-4045 chr19 5927817 5928027 + 8.84 0.000 intron (NM_003624, intron 9 of 16) intron (NM_003624, intron 9 of 16) 13668 NM_004058 828 Hs.584744 NM_004058 ENSG00000105519 CAPS CAPS1 calcyphosine protein-coding chr2-5707 chr2 213151501 213151711 + 8.84 0.000 promoter-TSS (NM_001079526) promoter-TSS (NM_001079526) 6 NM_001371276 chr12-3648 chr12 104740738 104740948 + 8.84 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 149210 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr5-2438 chr5 127871790 127872000 + 8.84 0.000 intron (NM_001317938, intron 5 of 6) intron (NM_001317938, intron 5 of 6) 168506 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr11-3655 chr11 115682230 115682440 + 8.84 0.000 Intergenic Intergenic 52427 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr4-6264 chr4 76028278 76028488 + 8.84 0.000 intron (NM_001130017, intron 1 of 9) intron (NM_001130017, intron 1 of 9) -4886 NM_001565 3627 Hs.632586 NM_001565 ENSG00000169245 CXCL10 C7|IFI10|INP10|IP-10|SCYB10|crg-2|gIP-10|mob-1 C-X-C motif chemokine ligand 10 protein-coding chr17-2193 chr17 75508451 75508661 + 8.84 0.000 intron (NM_020753, intron 2 of 19) intron (NM_020753, intron 2 of 19) 1334 NM_001142643 57513 Hs.274408 NM_020753 ENSG00000177303 CASKIN2 ANKS5B CASK interacting protein 2 protein-coding chr6-7878 chr6 107317247 107317457 + 8.84 0.000 intron (NM_020381, intron 2 of 7) intron (NM_020381, intron 2 of 7) 142212 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr11-6748 chr11 83170959 83171169 + 8.84 0.000 intron (NM_001346413, intron 8 of 15) intron (NM_001346413, intron 8 of 15) 13933 NM_001346414 51585 Hs.128959 NM_015885 ENSG00000165494 PCF11 - PCF11 cleavage and polyadenylation factor subunit protein-coding chrX-3318 chrX 119406849 119407059 + 8.84 0.000 intron (NM_145305, intron 2 of 4) intron (NM_145305, intron 2 of 4) 7618 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr19-2978 chr19 19170247 19170457 + 8.84 0.000 promoter-TSS (NM_001145785) promoter-TSS (NM_001145785) -89 NM_001367282 100271849 Hs.153629 NM_001145785 ENSG00000213999 MEF2B RSRFR2 myocyte enhancer factor 2B protein-coding chr9-6940 chr9 97696112 97696322 + 8.84 0.000 5' UTR (NM_001354975, exon 1 of 6) 5' UTR (NM_001354975, exon 1 of 6) 1192 NM_001354975 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr12-2881 chr12 27619491 27619701 + 8.84 0.000 intron (NM_001198915, intron 2 of 26) intron (NM_001198915, intron 2 of 26) -76851 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr3-6533 chr3 117499659 117499869 + 8.84 0.000 Intergenic Intergenic 191161 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr9-6678 chr9 135887134 135887344 + 8.84 0.000 intron (NM_015447, intron 1 of 16) intron (NM_015447, intron 1 of 16) 20307 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr2-5400 chr2 108323729 108323939 + 8.84 0.000 intron (NR_037191, intron 1 of 3) L2|LINE|L2 1596 NR_037191 151234 Hs.447681 NR_037191 ENSG00000237223 SULT1C2P1 SULT1C1P sulfotransferase family 1C member 2 pseudogene 1 pseudo chr14-2859 chr14 30871227 30871437 + 8.84 0.000 Intergenic Intergenic -3203 NM_001347720 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr14-3733 chr14 34314362 34314572 + 8.84 0.000 Intergenic AluJb|SINE|Alu 147773 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr6-3350 chr6 25812002 25812212 + 8.84 0.000 intron (NM_005074, intron 8 of 12) intron (NM_005074, intron 8 of 12) 19945 NM_005074 6568 Hs.205816 NM_005074 ENSG00000124568 SLC17A1 NAPI-1|NPT-1|NPT1 solute carrier family 17 member 1 protein-coding chr5-7641 chr5 51761687 51761897 + 8.84 0.000 Intergenic Intergenic -246239 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr20-1002 chr20 63045557 63045767 + 8.84 0.000 intron (NR_033369, intron 1 of 5) intron (NR_033369, intron 1 of 5) 7651 NR_033369 100144597 Hs.636485 NR_033369 ENSG00000237119 LINC01056 - long intergenic non-protein coding RNA 1056 ncRNA chr18-724 chr18 37334583 37334793 + 8.84 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 60228 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr3-10244 chr3 123286640 123286850 + 8.84 0.000 exon (NM_001199642, exon 20 of 21) exon (NM_001199642, exon 20 of 21) 84802 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr8-6516 chr8 66517584 66517794 + 8.84 0.000 3' UTR (NM_152765, exon 6 of 6) 3' UTR (NM_152765, exon 6 of 6) 24123 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 VXN C8orf46 vexin protein-coding chr4-2590 chr4 113547707 113547917 + 8.84 0.000 intron (NM_001321568, intron 5 of 19) intron (NM_001321568, intron 5 of 19) 213926 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr10-8272 chr10 76021476 76021686 + 8.84 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 238820 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr15-846 chr15 63277122 63277332 + 8.84 0.000 promoter-TSS (NM_001145646) promoter-TSS (NM_001145646) -323 NM_001145646 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chr8-4932 chr8 103243282 103243492 + 8.84 0.000 TTS (NR_148213) TTS (NR_148213) -55107 NM_001164615 8323 Hs.591863 NM_003506 ENSG00000164930 FZD6 FZ-6|FZ6|HFZ6|NDNC10 frizzled class receptor 6 protein-coding chr3-8160 chr3 32975608 32975818 + 8.84 0.000 Intergenic L1MEi|LINE|L1 24069 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr1-8219 chr1 26142304 26142514 + 8.84 0.000 Intergenic AluSz|SINE|Alu -16670 NM_024869 79927 Hs.694119 NM_024869 ENSG00000197245 FAM110D GRRP1 family with sequence similarity 110 member D protein-coding chr11-5288 chr11 40127057 40127267 + 8.84 0.000 intron (NR_047674, intron 1 of 1) AluSc|SINE|Alu 165968 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr2-10759 chr2 37916870 37917080 + 8.84 0.000 Intergenic Intergenic -8312 NM_001170791 151393 Hs.591566 NM_144713 ENSG00000115841 RMDN2 BLOCK18|FAM82A|FAM82A1|PRO34163|PYST9371|RMD-2|RMD2|RMD4 regulator of microtubule dynamics 2 protein-coding chr9-8194 chr9 107908019 107908229 + 8.84 0.000 Intergenic L1ME4c|LINE|L1 -418355 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr10-4350 chr10 31865048 31865258 + 8.84 0.000 intron (NM_001270696, intron 3 of 17) intron (NM_001270696, intron 3 of 17) 43773 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr16-6231 chr16 29008062 29008272 + 8.84 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 23115 NM_001014987 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr7-3594 chr7 27641998 27642208 + 8.84 0.000 intron (NM_152740, intron 2 of 7) intron (NM_152740, intron 2 of 7) 20780 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding chr22-839 chr22 42283449 42283659 + 8.84 0.000 intron (NM_005650, intron 1 of 5) CpG 373 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr1-6408 chr1 11594259 11594469 + 8.84 0.000 Intergenic Intergenic -15167 NR_104624 101929181 Hs.568616 NR_104624 ENSG00000235643 LINC01647 - long intergenic non-protein coding RNA 1647 ncRNA chr9-3650 chr9 93963011 93963221 + 8.84 0.000 Intergenic Intergenic 7282 NR_144455 101928040 Hs.375820 NR_144455 ENSG00000235601 BARX1-DT BARX1-AS1 BARX1 divergent transcript ncRNA chr16-3380 chr16 66206145 66206355 + 8.84 0.000 Intergenic MIRb|SINE|MIR -160441 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr2-8328 chr2 107678766 107678976 + 8.84 0.000 Intergenic Intergenic -75241 NR_126370 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chr3-9352 chr3 46618320 46618530 + 8.84 0.000 intron (NM_001195442, intron 2 of 2) intron (NM_001195442, intron 2 of 2) 5900 NM_001195442 100132146 Hs.679623 NM_001195442 ENSG00000283473 FAM240A - family with sequence similarity 240 member A protein-coding chr8-1278 chr8 24439140 24439350 + 8.84 0.000 intron (NR_125808, intron 1 of 5) intron (NR_125808, intron 1 of 5) -1781 NM_003817 8756 Hs.116147 NM_003817 ENSG00000069206 ADAM7 ADAM 7|ADAM-7|EAPI|GP-83|GP83 ADAM metallopeptidase domain 7 protein-coding chr3-4098 chr3 105790992 105791202 + 8.84 0.000 intron (NR_135809, intron 3 of 18) intron (NR_135809, intron 3 of 18) 76494 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr2-3422 chr2 70861966 70862176 + 8.84 0.000 Intergenic Intergenic -25800 NR_126384 104355141 Hs.291539 NR_126384 ENSG00000237751 LINC01143 - long intergenic non-protein coding RNA 1143 ncRNA chr9-4101 chr9 130466153 130466363 + 8.84 0.000 intron (NM_054012, intron 5 of 14) intron (NM_054012, intron 5 of 14) 21297 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr5-3680 chr5 176532118 176532328 + 8.84 0.000 intron (NM_014901, intron 2 of 10) intron (NM_014901, intron 2 of 10) 5179 NM_014901 22838 Hs.434888 NM_014901 ENSG00000146083 RNF44 - ring finger protein 44 protein-coding chr3-6693 chr3 132194307 132194517 + 8.84 0.000 Intergenic Intergenic -122995 NM_001099 55 Hs.433060 NM_001099 ENSG00000014257 ACPP 5'-NT|ACP-3|ACP3 acid phosphatase, prostate protein-coding chr1-12570 chr1 30907424 30907634 + 8.84 0.000 intron (NM_014654, intron 1 of 4) intron (NM_014654, intron 1 of 4) 1229 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr2-11430 chr2 221931362 221931572 + 8.84 0.000 Intergenic Intergenic -357265 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr6-5410 chr6 155275929 155276139 + 8.84 0.000 exon (NM_001001346, exon 2 of 2) exon (NM_001001346, exon 2 of 2) 12021 NM_001001346 49861 Hs.567491 NM_001001346 ENSG00000171217 CLDN20 - claudin 20 protein-coding chr17-2798 chr17 7043845 7044055 + 8.84 0.000 promoter-TSS (NM_153357) promoter-TSS (NM_153357) -33 NM_153357 162515 Hs.336564 NM_153357 ENSG00000174326 SLC16A11 MCT 11|MCT11 solute carrier family 16 member 11 protein-coding chr19-6018 chr19 1712967 1713177 + 8.84 0.000 Intergenic Intergenic -40434 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr11-4116 chr11 36340844 36341054 + 8.84 0.000 intron (NM_001160167, intron 1 of 8) intron (NM_001160167, intron 1 of 8) -35036 NM_001160168 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr2-10430 chr2 201622095 201622305 + 8.84 0.000 3' UTR (NM_152388, exon 12 of 12) 3' UTR (NM_152388, exon 12 of 12) -3022 NM_001168216 151254 Hs.335788 NM_152525 ENSG00000155754 C2CD6 ALS2CR11 C2 calcium dependent domain containing 6 protein-coding chr16-2909 chr16 1276530 1276740 + 8.84 0.000 Intergenic Intergenic 20566 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr22-3729 chr22 25896946 25897156 + 8.84 0.000 intron (NM_001318245, intron 28 of 43) L2b|LINE|L2 154863 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr6-5637 chr6 69633320 69633530 + 8.84 0.000 Intergenic Intergenic 163041 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr2-14378 chr2 219416492 219416702 + 8.84 0.000 Intergenic Intergenic -1780 NM_001927 1674 Hs.594952 NM_001927 ENSG00000175084 DES CDCD3|CMD1F|CSM1|CSM2|LGMD1D|LGMD1E|LGMD2R desmin protein-coding chr8-1120 chr8 100145800 100146010 + 8.84 0.000 promoter-TSS (NM_001029860) promoter-TSS (NM_001029860) -88 NM_001029860 286151 Hs.339577 NM_001029860 ENSG00000156509 FBXO43 EMI2|ERP1|FBX43 F-box protein 43 protein-coding chr22-652 chr22 37227314 37227524 + 8.84 0.000 intron (NM_002872, intron 5 of 6) intron (NM_002872, intron 5 of 6) -14942 NM_001051 6753 Hs.225995 NM_001051 ENSG00000278195 SSTR3 SS-3-R|SS3-R|SS3R|SSR-28 somatostatin receptor 3 protein-coding chr10-5107 chr10 48848159 48848369 + 8.84 0.000 intron (NM_020945, intron 39 of 61) intron (NM_020945, intron 39 of 61) 65971 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr12-4326 chr12 225058 225268 + 8.84 0.000 intron (NM_001190997, intron 7 of 12) intron (NM_001190997, intron 7 of 12) -11006 NM_001122848 6539 Hs.437174 NM_003044 ENSG00000111181 SLC6A12 BGT-1|BGT1|GAT2 solute carrier family 6 member 12 protein-coding chr5-3719 chr5 18469570 18469780 + 8.84 0.000 Intergenic Intergenic 662401 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr16-5505 chr16 12742768 12742978 + 8.84 0.000 intron (NM_018340, intron 2 of 3) MER68|LTR|ERVL 22552 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chrX-3943 chrX 10450443 10450653 + 8.84 0.000 intron (NM_000381, intron 9 of 9) MIRb|SINE|MIR 117055 NM_001193279 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr11-4185 chr11 60937797 60938007 + 8.84 0.000 TTS (NM_017870) TTS (NM_017870) 13442 NM_017870 54972 Hs.118552 NM_017870 ENSG00000006118 TMEM132A GBP|HSPA5BP1 transmembrane protein 132A protein-coding chrX-4181 chrX 34087872 34088082 + 8.84 0.000 Intergenic MER52-int|LTR|ERV1 44353 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr12-3153 chr12 48283595 48283805 + 8.84 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -45280 NM_181788 341567 Hs.155833 NM_181788 ENSG00000187166 H1FNT H1.7|H1T2 H1 histone family member N, testis specific protein-coding chr11-4238 chr11 64817906 64818116 + 8.84 0.000 Intergenic L2a|LINE|L2 -6717 NM_130803 4221 Hs.423348 NM_000244 ENSG00000133895 MEN1 MEAI|SCG2 menin 1 protein-coding chr3-4014 chr3 61980154 61980364 + 8.84 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 338688 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr18-3443 chr18 66071714 66071924 + 8.84 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 320807 NM_001317214 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr17-8032 chr17 50250177 50250387 + 8.84 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -21124 NM_001168215 162461 Hs.224630 NM_153229 ENSG00000167105 TMEM92 - transmembrane protein 92 protein-coding chr2-9115 chr2 206898957 206899167 + 8.84 0.000 Intergenic L1PA7|LINE|L1 -40456 NM_173077 130749 Hs.684103 NM_173077 ENSG00000144410 CPO - carboxypeptidase O protein-coding chr4-6929 chr4 16355330 16355540 + 8.84 0.000 Intergenic Intergenic 128772 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr6-4208 chr6 3911840 3912050 + 8.84 0.000 Intergenic Intergenic 62572 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr2-2742 chr2 159616023 159616233 + 8.84 0.000 promoter-TSS (NM_001329858) promoter-TSS (NM_001329858) 420 NM_013450 29994 Hs.470369 NM_013450 ENSG00000123636 BAZ2B WALp4 bromodomain adjacent to zinc finger domain 2B protein-coding chr15-1749 chr15 53286005 53286215 + 8.84 0.000 Intergenic Intergenic 169745 NR_147181 105370822 Hs.527821 NR_147181 ENSG00000259237 LINC02490 - long intergenic non-protein coding RNA 2490 ncRNA chr4-4338 chr4 35975983 35976193 + 8.84 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 267851 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chrX-3173 chrX 34387750 34387960 + 8.84 0.000 Intergenic CpG -255525 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr9-4357 chr9 131073245 131073455 + 8.84 0.000 intron (NM_006059, intron 20 of 27) intron (NM_006059, intron 20 of 27) -23126 NR_033701 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr4-4656 chr4 82802119 82802329 + 8.84 0.000 Intergenic L1MB2|LINE|L1 -3367 NM_024906 79966 Hs.379191 NM_024906 ENSG00000145284 SCD5 ACOD4|FADS4|HSCD5|SCD2|SCD4 stearoyl-CoA desaturase 5 protein-coding chr20-1953 chr20 32847897 32848107 + 8.84 0.000 intron (NM_012325, intron 6 of 6) intron (NM_012325, intron 6 of 6) -10921 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr1-14801 chr1 71712260 71712470 + 8.84 0.000 intron (NM_173808, intron 3 of 6) intron (NM_173808, intron 3 of 6) 124647 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr2-13939 chr2 184692111 184692321 + 8.84 0.000 intron (NM_194250, intron 1 of 3) intron (NM_194250, intron 1 of 3) 93687 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr3-6186 chr3 60592856 60593066 + 8.84 0.000 intron (NM_001320900, intron 5 of 9) intron (NM_001320900, intron 5 of 9) 24909 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr18-1906 chr18 32254997 32255207 + 8.84 0.000 Intergenic Intergenic 65063 NM_005925 4225 Hs.194777 NM_005925 ENSG00000141434 MEP1B - meprin A subunit beta protein-coding chr16-2956 chr16 6104477 6104687 + 8.84 0.000 intron (NM_018723, intron 1 of 15) L1MB7|LINE|L1 84879 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr11-2999 chr11 119422870 119423080 + 8.84 0.000 promoter-TSS (NM_001311160) promoter-TSS (NM_001311160) -413 NM_001311160 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr10-4085 chr10 54621450 54621660 + 8.84 0.000 intron (NR_134503, intron 4 of 5) intron (NR_134503, intron 4 of 5) -13598 NR_031642 100302192 NR_031642 ENSG00000221594 MIR548F1 MIR548F-1|MIRN548F1|hsa-mir-548f-1 microRNA 548f-1 ncRNA chr17-5085 chr17 4427532 4427742 + 8.84 0.000 Intergenic Intergenic -6303 NM_001320449 201305 Hs.657543 NM_182538 ENSG00000182557 SPNS3 SLC62A3 sphingolipid transporter 3 (putative) protein-coding chr22-3420 chr22 37943748 37943958 + 8.84 0.000 3' UTR (NM_001207062, exon 6 of 6) 3' UTR (NM_001207062, exon 6 of 6) 9748 NM_032561 84645 Hs.517612 NM_032561 ENSG00000128346 C22orf23 EVG1|dJ1039K5.6 chromosome 22 open reading frame 23 protein-coding chr19-3097 chr19 6633295 6633505 + 8.84 0.000 Intergenic LTR13|LTR|ERVK 36758 NM_172014 8740 Hs.129708 NM_003807 ENSG00000125735 TNFSF14 CD258|HVEML|LIGHT|LTg TNF superfamily member 14 protein-coding chr5-4088 chr5 65394529 65394739 + 8.84 0.000 intron (NR_135689, intron 7 of 25) intron (NR_135689, intron 7 of 25) 87286 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr16-2935 chr16 3012776 3012986 + 8.84 0.000 promoter-TSS (NM_020982) promoter-TSS (NM_020982) -42 NM_020982 9080 Hs.296949 NM_020982 ENSG00000213937 CLDN9 - claudin 9 protein-coding chr15-2620 chr15 66617703 66617913 + 8.84 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) 35618 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr3-5671 chr3 12874946 12875156 + 8.84 0.000 Intergenic Intergenic 10160 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr3-6433 chr3 102423338 102423548 + 8.84 0.000 Intergenic Intergenic -11572 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr7-3895 chr7 112131360 112131570 + 8.84 0.000 intron (NM_001363540, intron 1 of 52) L2c|LINE|L2 74934 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr9-5014 chr9 26248522 26248732 + 8.84 0.000 Intergenic Intergenic 181952 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr1-11195 chr1 241998995 241999205 + 8.84 0.000 promoter-TSS (NM_001004343) promoter-TSS (NM_001004343) -2 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr12-7116 chr12 46215860 46216070 + 8.84 0.000 intron (NM_030674, intron 5 of 16) intron (NM_030674, intron 5 of 16) 50551 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr4-2159 chr4 87839403 87839613 + 8.84 0.000 intron (NM_020203, intron 3 of 3) intron (NM_020203, intron 3 of 3) 4805 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr18-1364 chr18 13513195 13513405 + 8.84 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) 53353 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr6-2755 chr6 116246155 116246365 + 8.84 0.000 3' UTR (NM_152729, exon 12 of 12) 3' UTR (NM_152729, exon 12 of 12) 7815 NM_021648 23270 Hs.284141 NM_021648 ENSG00000187189 TSPYL4 dJ486I3.2 TSPY like 4 protein-coding chrX-1212 chrX 72100051 72100261 + 8.84 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) 31759 NM_001024455 340526 Hs.512180 NM_001024455 ENSG00000242732 RTL5 6430402L03Rik|MAR5|MART5|RGAG4|SIRH8 retrotransposon Gag like 5 protein-coding chr14-1515 chr14 53392021 53392231 + 8.84 0.000 Intergenic LTR33A|LTR|ERVL 238772 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr8-2424 chr8 98164804 98165014 + 8.84 0.000 Intergenic LTR16E2|LTR|ERVL 47069 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr18-2046 chr18 46686164 46686374 + 8.84 0.000 exon (NM_001307986, exon 6 of 8) exon (NM_001307986, exon 6 of 8) -29236 NM_144612 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr17-6392 chr17 82623590 82623800 + 8.84 0.000 intron (NM_019613, intron 5 of 9) AluSg|SINE|Alu 24749 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr19-3780 chr19 2810830 2811040 + 8.84 0.000 intron (NM_003249, intron 11 of 12) intron (NM_003249, intron 11 of 12) -8933 NM_001102651 115196 Hs.307043 NM_152303 ENSG00000172006 ZNF554 - zinc finger protein 554 protein-coding chr2-4227 chr2 218081682 218081892 + 8.84 0.000 intron (NR_034176, intron 11 of 13) intron (NR_034176, intron 11 of 13) 12772 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr8-7055 chr8 114783995 114784205 + 8.84 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 883913 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr2-8393 chr2 113214027 113214237 + 8.84 0.000 Intergenic MIR3|SINE|MIR -21395 NR_047570 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr17-4704 chr17 29710433 29710643 + 8.84 0.000 intron (NM_033389, intron 2 of 14) intron (NM_033389, intron 2 of 14) 50894 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr2-10893 chr2 68193690 68193900 + 8.84 0.000 intron (NM_000945, intron 2 of 5) intron (NM_000945, intron 2 of 5) 35907 NM_020143 56902 Hs.262858 NM_020143 ENSG00000115946 PNO1 KHRBP1|RRP20 partner of NOB1 homolog protein-coding chr10-3991 chr10 127577459 127577669 + 8.84 0.000 Intergenic Intergenic 28215 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr1-5813 chr1 207140416 207140626 + 8.84 0.000 intron (NM_000715, intron 9 of 11) intron (NM_000715, intron 9 of 11) 36288 NM_000715 722 Hs.1012 NM_000715 ENSG00000123838 C4BPA C4BP|PRP complement component 4 binding protein alpha protein-coding chr18-2569 chr18 7547236 7547446 + 8.84 0.000 Intergenic L3|LINE|CR1 -19975 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr17-7101 chr17 72420810 72421020 + 8.84 0.000 non-coding (NR_152516, exon 3 of 4) non-coding (NR_152516, exon 3 of 4) 78104 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr6-5413 chr6 155624298 155624508 + 8.84 0.000 Intergenic MER4CL34|LTR|ERV1 109559 NR_134597 105378068 Hs.131541 NR_134596 LOC105378068 - uncharacterized LOC105378068 ncRNA chr5-2216 chr5 177134584 177134794 + 8.84 0.000 intron (NM_001365684, intron 1 of 23) intron (NM_001365684, intron 1 of 23) 460 NM_001365684 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr5-1307 chr5 62606955 62607165 + 8.84 0.000 intron (NM_016338, intron 29 of 29) intron (NM_016338, intron 29 of 29) 28241 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr4-6913 chr4 15705579 15705789 + 8.84 0.000 intron (NM_004334, intron 2 of 8) intron (NM_004334, intron 2 of 8) 2619 NM_004334 683 Hs.720344 NM_004334 ENSG00000109743 BST1 CD157 bone marrow stromal cell antigen 1 protein-coding chr10-5268 chr10 68065627 68065837 + 8.84 0.000 intron (NM_001278185, intron 3 of 23) AluJb|SINE|Alu 9551 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr2-13028 chr2 108259306 108259516 + 8.84 0.000 intron (NM_001320878, intron 7 of 7) MER5A|DNA|hAT-Charlie 19443 NM_001320878 442038 NM_001008743 ENSG00000196228 SULT1C3 ST1C3 sulfotransferase family 1C member 3 protein-coding chr13-2630 chr13 77780841 77781051 + 8.84 0.000 Intergenic Intergenic -37991 NR_103853 100505518 Hs.742215 NR_103853 EDNRB-AS1 - EDNRB antisense RNA 1 ncRNA chr7-8409 chr7 45694977 45695187 + 8.84 0.000 intron (NM_021116, intron 14 of 19) L1MEc|LINE|L1 73936 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr16-3238 chr16 86026237 86026447 + 8.84 0.000 Intergenic Intergenic 107995 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr15-2675 chr15 77903882 77904092 + 8.84 0.000 Intergenic CpG 22859 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr17-2471 chr17 52151975 52152185 + 8.84 0.000 intron (NM_001082533, intron 2 of 9) MIRb|SINE|MIR 6634 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr1-10656 chr1 182977607 182977817 + 8.84 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -24546 NM_030933 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr5-2512 chr5 155324077 155324287 + 8.84 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 310427 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr3-2373 chr3 171379450 171379660 + 8.84 0.000 intron (NM_001161563, intron 1 of 31) intron (NM_001161563, intron 1 of 31) 80850 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr10-8453 chr10 86699313 86699523 + 8.84 0.000 3' UTR (NM_001368068, exon 9 of 9) 3' UTR (NM_001368068, exon 9 of 9) 30854 NM_001080116 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr3-5674 chr3 13052115 13052325 + 8.84 0.000 intron (NM_001134382, intron 1 of 13) L1MD2|LINE|L1 21209 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding KI270927.1-2 KI270927.1 90189 90399 + 8.84 0.000 NA NA NA NA chr1-11217 chr1 244926815 244927025 + 8.84 0.000 Intergenic AluSg7|SINE|Alu -42949 NM_032328 84288 Hs.134857 NM_032328 ENSG00000203666 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding chr12-2784 chr12 62434898 62435108 + 8.84 0.000 Intergenic Intergenic -31823 NM_001278469 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr10-5736 chr10 101727392 101727602 + 8.84 0.000 Intergenic L2b|LINE|L2 -32202 NM_001323541 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr2-10767 chr2 40097690 40097900 + 8.84 0.000 3' UTR (NM_001112802, exon 8 of 8) 3' UTR (NM_001112802, exon 8 of 8) 180161 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA GL000220.1-1 GL000220.1 118742 118952 + 8.84 0.000 NA NA NA NA chrX-1987 chrX 12441860 12442070 + 8.84 0.000 intron (NM_001368402, intron 2 of 17) intron (NM_001368402, intron 2 of 17) -56715 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr13-860 chr13 111270055 111270265 + 8.84 0.000 intron (NM_001330597, intron 9 of 18) intron (NM_001330597, intron 9 of 18) 28986 NM_001354061 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr1-11979 chr1 85559680 85559890 + 8.84 0.000 intron (NM_001134445, intron 1 of 6) L1MEf|LINE|L1 18415 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr12-7232 chr12 51126546 51126756 + 8.84 0.000 intron (NM_005653, intron 1 of 14) intron (NM_005653, intron 1 of 14) -43055 NR_045072 81566 Hs.524425 NM_030809 ENSG00000110925 CSRNP2 C12orf2|C12orf22|FAM130A1|PPP1R72|TAIP-12 cysteine and serine rich nuclear protein 2 protein-coding chr8-2202 chr8 142774338 142774548 + 8.84 0.000 3' UTR (NM_177476, exon 4 of 4) 3' UTR (NM_177476, exon 4 of 4) 2088 NM_001356370 66004 Hs.158665 NM_177457 ENSG00000180155 LYNX1 - Ly6/neurotoxin 1 protein-coding chr17-2682 chr17 43114108 43114318 + 8.84 0.000 intron (NM_007297, intron 2 of 21) AluJo|SINE|Alu 9902 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr4-2266 chr4 176045284 176045494 + 8.84 0.000 Intergenic Intergenic -20452 NM_001350727 116966 Hs.532056 NM_170710 ENSG00000150627 WDR17 - WD repeat domain 17 protein-coding chr6-6151 chr6 1087131 1087341 + 8.84 0.000 intron (NR_027116, intron 1 of 3) intron (NR_027116, intron 1 of 3) 14096 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr2-10805 chr2 46592574 46592784 + 8.84 0.000 intron (NM_173074, intron 4 of 6) intron (NM_173074, intron 4 of 6) -12441 NR_104182 100506142 Hs.658541 NR_104182 ENSG00000250116 LOC100506142 - uncharacterized LOC100506142 ncRNA chr7-8578 chr7 65958109 65958319 + 8.84 0.000 3' UTR (NM_173517, exon 3 of 3) 3' UTR (NM_173517, exon 3 of 3) 23999 NM_001293104 2990 Hs.255230 NM_000181 ENSG00000169919 GUSB BG|MPS7 glucuronidase beta protein-coding chrX-4697 chrX 86400831 86401041 + 8.84 0.000 intron (NM_001139515, intron 2 of 11) L1PA4|LINE|L1 137968 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr7-3691 chr7 50473418 50473628 + 8.84 0.000 intron (NM_001242888, intron 9 of 12) intron (NM_001242888, intron 9 of 12) -23117 NM_001287493 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr4-726 chr4 182917374 182917584 + 8.84 0.000 promoter-TSS (NM_001351745) promoter-TSS (NM_001351745) -2 NM_001921 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr12-3352 chr12 92060038 92060248 + 8.84 0.000 intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 81570 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr22-4203 chr22 46173573 46173783 + 8.84 0.000 intron (NM_001001928, intron 2 of 7) L1MC4|LINE|L1 22883 NM_001362873 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr13-2897 chr13 113049363 113049573 + 8.84 0.000 intron (NM_001366646, intron 2 of 27) intron (NM_001366646, intron 2 of 27) 4822 NM_001366646 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr1-15847 chr1 181192417 181192627 + 8.84 0.000 Intergenic Intergenic 18038 NR_125966 101928973 Hs.637822 NR_125966 ENSG00000237292 LINC01732 - long intergenic non-protein coding RNA 1732 ncRNA chr1-3398 chr1 214447145 214447355 + 8.84 0.000 intron (NM_005401, intron 3 of 18) intron (NM_005401, intron 3 of 18) 104352 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr19-3471 chr19 34772504 34772714 + 8.84 0.000 intron (NM_001007248, intron 1 of 3) intron (NM_001007248, intron 1 of 3) 606 NM_001007248 148103 Hs.590961 NM_001007247 ENSG00000153896 ZNF599 - zinc finger protein 599 protein-coding chr11-4436 chr11 94835657 94835867 + 8.84 0.000 intron (NM_130847, intron 6 of 12) intron (NM_130847, intron 6 of 12) 67406 NM_001301007 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr11-5358 chr11 64469377 64469587 + 8.84 0.000 Intergenic Intergenic 20425 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr2-6342 chr2 85482269 85482479 + 8.84 0.000 Intergenic AluSc8|SINE|Alu 56512 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr13-827 chr13 45465355 45465565 + 8.84 0.000 intron (NM_031431, intron 1 of 22) CpG 521 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chr12-5161 chr12 102225862 102226072 + 8.84 0.000 Intergenic Intergenic -28134 NM_002674 5367 Hs.707990 NM_002674 ENSG00000183395 PMCH MCH|ppMCH pro-melanin concentrating hormone protein-coding chr18-2732 chr18 73563490 73563700 + 8.84 0.000 Intergenic Intergenic 238654 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr7-1891 chr7 140059299 140059509 + 8.84 0.000 intron (NR_130117, intron 1 of 10) intron (NR_130117, intron 1 of 10) 4317 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr15-2650 chr15 73769946 73770156 + 8.84 0.000 TTS (NR_120353) TTS (NR_120353) 1837 NR_120352 101929221 NR_120352 INSYN1-AS1 C15orf59-AS1 INSYN1 antisense RNA 1 ncRNA chr13-2910 chr13 113767509 113767719 + 8.84 0.000 intron (NM_182614, intron 2 of 8) intron (NM_182614, intron 2 of 8) 8371 NM_001348663 348013 Hs.280805 NM_182614 ENSG00000184497 TMEM255B FAM70B transmembrane protein 255B protein-coding chr11-4995 chr11 72807497 72807707 + 8.84 0.000 Intergenic AluSx|SINE|Alu -6809 NM_033388 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr10-6971 chr10 68345783 68345993 + 8.84 0.000 exon (NM_017987, exon 18 of 18) exon (NM_017987, exon 18 of 18) -12960 NM_001033083 64081 Hs.198158 NM_022129 ENSG00000108187 PBLD HEL-S-306|MAWBP|MAWDBP phenazine biosynthesis like protein domain containing protein-coding chr11-10687 chr11 128941469 128941679 + 8.84 0.000 intron (NM_022112, intron 1 of 3) LTR41|LTR|ERVL 1825 NM_001195195 63970 Hs.160953 NM_022112 ENSG00000120471 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding chr13-1461 chr13 78119702 78119912 + 8.84 0.000 intron (NR_047001, intron 1 of 5) intron (NR_047001, intron 1 of 5) 64952 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr1-14858 chr1 78687833 78688043 + 8.84 0.000 Intergenic Intergenic 38107 NM_006417 10561 Hs.82316 NM_006417 ENSG00000137965 IFI44 MTAP44|TLDC5|p44 interferon induced protein 44 protein-coding chr10-2563 chr10 69672775 69672985 + 8.84 0.000 Intergenic Intergenic 42633 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr16-3718 chr16 4216683 4216893 + 8.84 0.000 intron (NM_001323667, intron 1 of 6) intron (NM_001323667, intron 1 of 6) 25292 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr19-5033 chr19 48708502 48708712 + 8.84 0.000 Intergenic Intergenic -4759 NR_131188 105447645 Hs.655052 NR_131188 LOC105447645 - uncharacterized LOC105447645 ncRNA chr21-1286 chr21 40433329 40433539 + 8.84 0.000 intron (NR_073202, intron 3 of 32) intron (NR_073202, intron 3 of 32) 50350 NR_038899 100506492 Hs.667053 NR_038896 ENSG00000235123 DSCAM-AS1 M41 DSCAM antisense RNA 1 ncRNA chr10-3367 chr10 18683389 18683599 + 8.84 0.000 Intergenic Intergenic 24063 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding chr7-9136 chr7 110003888 110004098 + 8.84 0.000 Intergenic Intergenic -43780 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr2-6849 chr2 71935561 71935771 + 8.84 0.000 Intergenic Intergenic 212196 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr10-2957 chr10 44725395 44725605 + 8.84 0.000 Intergenic L1MB8|LINE|L1 -185816 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr9-3026 chr9 125494597 125494807 + 8.84 0.000 intron (NM_024117, intron 7 of 10) L2b|LINE|L2 212506 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr6-3314 chr6 165922322 165922532 + 8.84 0.000 Intergenic Intergenic -65124 NR_027284 441177 Hs.708964 NM_001013720 ENSG00000281832 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA chrX-1154 chrX 42746647 42746857 + 8.84 0.000 Intergenic Intergenic 31411 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr11-9077 chr11 30437579 30437789 + 8.84 0.000 intron (NM_001584, intron 3 of 5) intron (NM_001584, intron 3 of 5) 114580 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr9-8728 chr9 132320948 132321158 + 8.84 0.000 intron (NM_001351527, intron 10 of 25) HAL1|LINE|L1 33803 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr7-8210 chr7 32042896 32043106 + 8.84 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 27406 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr11-1823 chr11 61270619 61270829 + 8.84 0.000 intron (NM_152718, intron 14 of 19) intron (NM_152718, intron 14 of 19) 24592 NM_152718 220001 Hs.60640 NM_152718 ENSG00000167992 VWCE URG11|VWC1 von Willebrand factor C and EGF domains protein-coding chr17-3049 chr17 80133177 80133387 + 8.84 0.000 Intergenic Intergenic 13846 NM_014740 9775 Hs.389649 NM_014740 ENSG00000141543 EIF4A3 DDX48|Fal1|MUK34|NMP265|NUK34|RCPS|eIF-4A-III|eIF4A-III|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding chr5-3261 chr5 101690414 101690624 + 8.84 0.000 Intergenic MSTA|LTR|ERVL-MaLR 605765 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr17-5593 chr17 47812174 47812384 + 8.84 0.000 intron (NM_145798, intron 16 of 22) intron (NM_145798, intron 16 of 22) 9515 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding chr7-4987 chr7 155154667 155154877 + 8.84 0.000 Intergenic Intergenic -83215 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chr15-2898 chr15 42808103 42808313 + 8.84 0.000 intron (NM_173500, intron 9 of 14) intron (NM_173500, intron 9 of 14) -71080 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chrX-3452 chrX 24484249 24484459 + 8.84 0.000 intron (NM_001142386, intron 1 of 11) intron (NM_001142386, intron 1 of 11) 19068 NM_001142386 5165 Hs.296031 NM_005391 ENSG00000067992 PDK3 CMTX6|GS1-358P8.4 pyruvate dehydrogenase kinase 3 protein-coding chr2-6868 chr2 75862298 75862508 + 8.84 0.000 Intergenic Intergenic -151488 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr1-8028 chr1 229341541 229341751 + 8.84 0.000 intron (NM_145257, intron 2 of 3) intron (NM_145257, intron 2 of 3) 1401 NM_145257 126731 Hs.585011 NM_145257 ENSG00000154429 CCSAP C1orf96|CSAP centriole, cilia and spindle associated protein protein-coding chr12-6825 chr12 13220109 13220319 + 8.84 0.000 TTS (NM_001423) TTS (NM_001423) 23488 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr9-8484 chr9 124328803 124329013 + 8.84 0.000 intron (NM_001166169, intron 7 of 9) intron (NM_001166169, intron 7 of 9) -24565 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr10-1161 chr10 132752460 132752670 + 8.84 0.000 intron (NM_005539, intron 11 of 15) intron (NM_005539, intron 11 of 15) 33582 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr9-6712 chr9 4048458 4048668 + 8.84 0.000 intron (NM_001042413, intron 4 of 10) intron (NM_001042413, intron 4 of 10) 103620 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr8-7029 chr8 111348502 111348712 + 8.84 0.000 Intergenic Intergenic -28032 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chrX-1833 chrX 103538818 103539028 + 8.84 0.000 intron (NR_131236, intron 1 of 3) intron (NR_131236, intron 1 of 3) 16030 NR_131237 105373300 NR_131236 LINC02589 - long intergenic non-protein coding RNA 2589 ncRNA chr2-12186 chr2 41036010 41036220 + 8.84 0.000 Intergenic AluSq2|SINE|Alu -523680 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr2-7396 chr2 8389473 8389683 + 8.84 0.000 Intergenic LFSINE_Vert|SINE|tRNA -61159 NR_152741 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr2-11656 chr2 7022592 7022802 + 8.84 0.000 intron (NM_001349186, intron 5 of 7) MARNA|DNA|TcMar-Mariner 55183 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr6-5412 chr6 155587634 155587844 + 8.84 0.000 Intergenic Intergenic 72895 NR_134597 105378068 Hs.131541 NR_134596 LOC105378068 - uncharacterized LOC105378068 ncRNA chr8-4280 chr8 95306863 95307073 + 8.84 0.000 intron (NR_038208, intron 2 of 3) intron (NR_038208, intron 2 of 3) -37767 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr18-1087 chr18 48360027 48360237 + 8.84 0.000 intron (NM_001371290, intron 2 of 9) intron (NM_001371290, intron 2 of 9) 15495 NM_001371291 chrX-385 chrX 54663009 54663219 + 8.84 0.000 Intergenic AluSp|SINE|Alu 132895 NM_001184819 54552 Hs.654677 NM_019067 ENSG00000130119 GNL3L GNL3B G protein nucleolar 3 like protein-coding chr12-8173 chr12 121838116 121838326 + 8.84 0.000 Intergenic Intergenic 20638 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr5-9114 chr5 173892677 173892887 + 8.84 0.000 promoter-TSS (NM_001308193) promoter-TSS (NM_001308193) -269 NM_001308193 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr11-10639 chr11 126137001 126137211 + 8.84 0.000 Intergenic MIRb|SINE|MIR -73814 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr17-7464 chr17 14965533 14965743 + 8.84 0.000 Intergenic Intergenic -49167 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr4-2818 chr4 39873915 39874125 + 8.84 0.000 intron (NM_001100399, intron 20 of 32) AluJo|SINE|Alu 103891 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding KI270442.1-3 KI270442.1 220392 220602 + 8.84 0.000 NA NA NA NA chr19-3560 chr19 46371784 46371994 + 8.84 0.000 intron (NM_001204284, intron 2 of 11) intron (NM_001204284, intron 2 of 11) 24802 NM_006247 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr5-3613 chr5 130333148 130333358 + 8.84 0.000 Intergenic MER44C|DNA|TcMar-Tigger 428788 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr12-4339 chr12 852081 852291 + 8.84 0.000 intron (NM_001184985, intron 4 of 27) intron (NM_001184985, intron 4 of 27) 80890 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr5-3027 chr5 13253367 13253577 + 8.84 0.000 Intergenic Intergenic -220586 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr21-789 chr21 45534974 45535184 + 8.84 0.000 promoter-TSS (NM_001205207) promoter-TSS (NM_001205207) -323 NM_001205207 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr5-4339 chr5 161564864 161565074 + 8.84 0.000 Intergenic Intergenic -16565 NM_000813 2561 Hs.303527 NM_000813 ENSG00000145864 GABRB2 ICEE2 gamma-aminobutyric acid type A receptor beta2 subunit protein-coding chr10-4502 chr10 86331398 86331608 + 8.84 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 35292 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr16-1174 chr16 86223280 86223490 + 8.84 0.000 Intergenic Intergenic 27204 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr4-2634 chr4 153233694 153233904 + 8.84 0.000 intron (NM_001302693, intron 1 of 2) intron (NM_001302693, intron 1 of 2) -23560 NM_001302694 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chrX-4471 chrX 62547382 62547592 + 8.84 0.000 Intergenic ALR/Alpha|Satellite|centr 803845 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr5-1714 chr5 136193471 136193681 + 8.84 0.000 promoter-TSS (NM_001350994) promoter-TSS (NM_001350994) -414 NM_001350994 389332 Hs.127680 NM_001350994 ENSG00000271824 SMIM32 - small integral membrane protein 32 protein-coding chr2-13009 chr2 107337629 107337839 + 8.84 0.000 intron (NR_049853, intron 1 of 3) intron (NR_049853, intron 1 of 3) 11791 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr7-4405 chr7 98995873 98996083 + 8.84 0.000 intron (NM_003496, intron 65 of 70) intron (NM_003496, intron 65 of 70) -17187 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr2-6726 chr2 29277855 29278065 + 8.84 0.000 intron (NM_004304, intron 9 of 28) intron (NM_004304, intron 9 of 28) -54060 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr16-3114 chr16 69373587 69373797 + 8.84 0.000 intron (NM_005652, intron 3 of 9) AluJb|SINE|Alu 12315 NM_005652 7014 Hs.63335 NM_005652 ENSG00000132604 TERF2 TRBF2|TRF2 telomeric repeat binding factor 2 protein-coding chr2-14308 chr2 217247656 217247866 + 8.84 0.000 Intergenic Intergenic -34972 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2-7178 chr2 206853019 206853229 + 8.84 0.000 Intergenic L2c|LINE|L2 -69816 NR_036077 100422993 NR_036077 ENSG00000283469 MIR3130-1 MIR3130-3|mir-3130-1 microRNA 3130-1 ncRNA chr13-1639 chr13 59392857 59393067 + 8.84 0.000 Intergenic Intergenic -619756 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr3-8607 chr3 165430183 165430393 + 8.84 0.000 intron (NR_125764, intron 3 of 5) L1PB1|LINE|L1 223328 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr11-9793 chr11 69967570 69967780 + 8.84 0.000 Intergenic MIR|SINE|MIR 96249 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr8-4159 chr8 77905862 77906072 + 8.84 0.000 Intergenic Intergenic 455270 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chrX-682 chrX 20067944 20068154 + 8.84 0.000 intron (NM_152780, intron 1 of 15) MamTip3|DNA|hAT-Tip100 48591 NM_001168467 256714 Hs.127951 NM_152780 ENSG00000184368 MAP7D2 - MAP7 domain containing 2 protein-coding chr3-3565 chr3 51928422 51928632 + 8.84 0.000 Intergenic Intergenic 13377 NM_004704 9136 Hs.153768 NM_004704 ENSG00000114767 RRP9 RNU3IP2|U3-55K ribosomal RNA processing 9, U3 small nucleolar RNA binding protein protein-coding chr14-2325 chr14 100149061 100149271 + 8.84 0.000 exon (NM_206918, exon 2 of 3) exon (NM_206918, exon 2 of 3) 10479 NM_206918 123099 Hs.159643 NM_206918 ENSG00000168350 DEGS2 C14orf66|DES2|FADS8 delta 4-desaturase, sphingolipid 2 protein-coding chr8-3874 chr8 37890315 37890525 + 8.84 0.000 intron (NM_001002814, intron 1 of 5) intron (NM_001002814, intron 1 of 5) 9077 NM_001002814 80223 Hs.191179 NM_025151 ENSG00000156675 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 protein-coding chr3-9452 chr3 49433883 49434093 + 8.84 0.000 Intergenic AluSc|SINE|Alu -4664 NM_032316 84276 Hs.191460 NM_032316 ENSG00000145029 NICN1 - nicolin 1 protein-coding chr4-8045 chr4 120546919 120547129 + 8.84 0.000 Intergenic L2c|LINE|L2 375842 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr20-2430 chr20 23862030 23862240 + 8.84 0.000 Intergenic L1PA8|LINE|L1 17613 NM_001900 1473 Hs.121489 NM_001900 ENSG00000170367 CST5 - cystatin D protein-coding chr12-1999 chr12 1430183 1430393 + 8.84 0.000 intron (NR_027948, intron 18 of 19) MLT1F1|LTR|ERVL-MaLR -70203 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr11-9168 chr11 35109006 35109216 + 8.84 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 28921 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr19-4853 chr19 38530696 38530906 + 8.84 0.000 intron (NM_001042723, intron 75 of 104) AluSq2|SINE|Alu -65546 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr10-5824 chr10 110804036 110804246 + 8.84 0.000 intron (NM_001134363, intron 7 of 13) MLT1K|LTR|ERVL-MaLR 66763 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr2-6024 chr2 102039006 102039216 + 8.84 0.000 Intergenic AluYc|SINE|Alu -31279 NM_001320978 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr15-2275 chr15 55855610 55855820 + 8.84 0.000 intron (NM_198400, intron 5 of 21) intron (NM_198400, intron 5 of 21) 61416 NR_104302 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr5-3110 chr5 53423776 53423986 + 8.84 0.000 Intergenic Intergenic -56748 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr1-12479 chr1 18761435 18761645 + 8.84 0.000 Intergenic Intergenic 98121 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr2-13505 chr2 150133700 150133910 + 8.84 0.000 Intergenic Intergenic 123202 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr20-3203 chr20 50787963 50788173 + 8.84 0.000 Intergenic Intergenic -6826 NM_001010974 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr17-6331 chr17 65398333 65398543 + 8.84 0.000 Intergenic MER5C1|DNA|hAT-Charlie -59103 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr3-3505 chr3 13781701 13781911 + 8.84 0.000 Intergenic Intergenic 98265 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding chr17-6704 chr17 79157882 79158092 + 8.84 0.000 intron (NM_001350453, intron 3 of 13) MLT1B|LTR|ERVL-MaLR 83050 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr18-3015 chr18 25733984 25734194 + 8.84 0.000 Intergenic Intergenic 356524 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr11-6499 chr11 68550716 68550926 + 8.84 0.000 intron (NR_147971, intron 6 of 24) intron (NR_147971, intron 6 of 24) 90069 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr3-8843 chr3 9166902 9167112 + 8.84 0.000 intron (NM_014850, intron 1 of 21) L2|LINE|L2 -25486 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr1-15077 chr1 96944066 96944276 + 8.84 0.000 Intergenic Intergenic -151752 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr2-7071 chr2 168458142 168458352 + 8.84 0.000 intron (NM_001256126, intron 1 of 10) intron (NM_001256126, intron 1 of 10) 1975 NM_001256126 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr12-4513 chr12 23499029 23499239 + 8.84 0.000 Intergenic AluJr|SINE|Alu 85452 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr9-8228 chr9 109690432 109690642 + 8.84 0.000 intron (NM_001037293, intron 1 of 6) intron (NM_001037293, intron 1 of 6) 49749 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr16-6053 chr16 10849808 10850018 + 8.84 0.000 Intergenic Intergenic -27285 NM_000246 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding chr11-4725 chr11 72326373 72326583 + 8.84 0.000 intron (NM_030813, intron 7 of 16) intron (NM_030813, intron 7 of 16) -82302 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr9-2812 chr9 123543969 123544179 + 8.84 0.000 intron (NM_001352968, intron 12 of 18) intron (NM_001352968, intron 12 of 18) -58452 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr15-3086 chr15 63087207 63087417 + 8.84 0.000 Intergenic MIR3|SINE|MIR -34549 NM_032857 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr20-3759 chr20 19720309 19720519 + 8.84 0.000 intron (NM_020689, intron 16 of 16) L2b|LINE|L2 -166107 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr9-7372 chr9 17004608 17004818 + 8.84 0.000 Intergenic MIR3|SINE|MIR -130327 NM_001286984 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr5-7800 chr5 65134308 65134518 + 8.84 0.000 Intergenic Intergenic 347507 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr1-6017 chr1 58816255 58816465 + 8.84 0.000 intron (NR_108106, intron 1 of 1) CpG 31209 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr6-3361 chr6 35768391 35768601 + 8.84 0.000 Intergenic Intergenic -8098 NR_104469 389383 Hs.259563 NM_207409 ENSG00000196748 CLPSL2 AAAL3045|C6orf126|UNQ3045|dJ510O8.5 colipase like 2 protein-coding chr19-5478 chr19 41139145 41139355 + 8.84 0.000 Intergenic AluSz|SINE|Alu 24818 NR_135528 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr22-3180 chr22 32119488 32119698 + 8.84 0.000 Intergenic Intergenic -2384 NR_040114 23782 Hs.581098 NR_040114 ENSG00000234479 AP1B1P1 ADTB1L1|dJ127L4.2 AP1B1 pseudogene 1 pseudo chr13-1941 chr13 94751788 94751998 + 8.84 0.000 Intergenic FRAM|SINE|Alu -9048 NR_110754 101927284 Hs.551673 NR_110754 LOC101927284 - uncharacterized LOC101927284 ncRNA chr3-4207 chr3 132667534 132667744 + 8.84 0.000 intron (NM_198329, intron 3 of 11) intron (NM_198329, intron 3 of 11) 6942 NM_001320210 79876 Hs.170737 NM_024818 ENSG00000081307 UBA5 EIEE44|SCAR24|THIFP1|UBE1DC1 ubiquitin like modifier activating enzyme 5 protein-coding chr2-4503 chr2 22152247 22152457 + 8.84 0.000 Intergenic L1PB4|LINE|L1 -384127 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr9-7419 chr9 22237786 22237996 + 8.84 0.000 Intergenic Intergenic -208933 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr11-4673 chr11 62158345 62158555 + 8.84 0.000 Intergenic L1PA7|LINE|L1 -31766 NM_006552 10648 Hs.202686 NM_006552 ENSG00000168515 SCGB1D1 LIPA|LPHA|LPNA secretoglobin family 1D member 1 protein-coding chr5-5382 chr5 134157172 134157382 + 8.84 0.000 3' UTR (NM_170679, exon 6 of 6) 3' UTR (NM_170679, exon 6 of 6) 19673 NM_170679 6500 Hs.171626 NM_006930 ENSG00000113558 SKP1 EMC19|OCP-II|OCP2|SKP1A|TCEB1L|p19A S-phase kinase associated protein 1 protein-coding chr4-3879 chr4 140096203 140096413 + 8.84 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -31707 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr13-3474 chr13 113473696 113473906 + 8.84 0.000 intron (NM_001014283, intron 4 of 6) AluJo|SINE|Alu 16910 NM_001014283 55208 Hs.682987 NM_018185 ENSG00000150401 DCUN1D2 C13orf17 defective in cullin neddylation 1 domain containing 2 protein-coding chr17-8440 chr17 76879770 76879980 + 8.84 0.000 intron (NM_144677, intron 2 of 16) intron (NM_144677, intron 2 of 16) 7228 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B protein-coding chr5-6322 chr5 131018080 131018290 + 8.84 0.000 Intergenic L1PB1|LINE|L1 147071 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr20-3963 chr20 34580000 34580210 + 8.84 0.000 intron (NM_080476, intron 10 of 11) intron (NM_080476, intron 10 of 11) 21387 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr22-1868 chr22 40008806 40009016 + 8.84 0.000 intron (NM_138435, intron 1 of 4) intron (NM_138435, intron 1 of 4) 13957 NM_138435 113828 Hs.26192 NM_138435 ENSG00000133477 FAM83F - family with sequence similarity 83 member F protein-coding chr6-8297 chr6 143561854 143562064 + 8.84 0.000 promoter-TSS (NR_110149) promoter-TSS (NR_110149) 92 NR_110149 285740 Hs.432656 NR_027113 ENSG00000235740 PHACTR2-AS1 - PHACTR2 antisense RNA 1 ncRNA chr17-5668 chr17 50381992 50382202 + 8.84 0.000 TTS (NM_001166131) TTS (NM_001166131) 8868 NM_152463 146956 Hs.514330 NM_152463 ENSG00000154920 EME1 MMS4L|SLX2A essential meiotic structure-specific endonuclease 1 protein-coding chr1-12625 chr1 39076329 39076539 + 8.84 0.000 Intergenic Intergenic -7733 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr22-3190 chr22 35476427 35476637 + 8.84 0.000 Intergenic Intergenic -63962 NM_001366725 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr19-7063 chr19 53977558 53977768 + 8.84 0.000 intron (NM_031895, intron 1 of 3) intron (NM_031895, intron 1 of 3) -4644 NR_030632 100126325 NR_030632 ENSG00000284583 MIR935 MIRN935|hsa-mir-935|mir-935 microRNA 935 ncRNA chr1-10493 chr1 164892769 164892979 + 8.84 0.000 Intergenic Intergenic -118233 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr4-3847 chr4 126591801 126592011 + 8.84 0.000 Intergenic Intergenic -1041051 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr10-2605 chr10 77454204 77454414 + 8.84 0.000 intron (NM_001271519, intron 1 of 28) L3|LINE|CR1 103437 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr5-7796 chr5 64807421 64807631 + 8.84 0.000 intron (NM_005869, intron 10 of 13) intron (NM_005869, intron 10 of 13) 38596 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr11-6803 chr11 91883793 91884003 + 8.84 0.000 Intergenic L1MEd|LINE|L1 -341136 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr22-2522 chr22 24431372 24431582 + 8.84 0.000 promoter-TSS (NM_001278498) promoter-TSS (NM_001278498) -642 NM_001278497 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chr2-6182 chr2 2939076 2939286 + 8.84 0.000 intron (NR_110228, intron 5 of 6) intron (NR_110228, intron 5 of 6) 186845 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr4-4566 chr4 74614088 74614298 + 8.84 0.000 Intergenic L2a|LINE|L2 169057 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr8-7058 chr8 115405071 115405281 + 8.84 0.000 Intergenic L2a|LINE|L2 262837 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr12-6494 chr12 104317718 104317928 + 8.84 0.000 intron (NM_001093771, intron 7 of 16) AluJo|SINE|Alu 14084 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr2-7519 chr2 20860577 20860787 + 8.84 0.000 Intergenic Intergenic -37552 NM_001282719 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr9-5781 chr9 128078307 128078517 + 8.84 0.000 intron (NM_001006641, intron 1 of 9) intron (NM_001006641, intron 1 of 9) 10212 NM_001006641 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr1-7399 chr1 32588286 32588496 + 8.84 0.000 intron (NR_111980, intron 2 of 3) L2a|LINE|L2 48964 NR_111980 653121 Hs.546479 NM_144621 ENSG00000160062 ZBTB8A BOZF1|ZBTB8|ZNF916A zinc finger and BTB domain containing 8A protein-coding chr8-4028 chr8 59438730 59438940 + 8.84 0.000 Intergenic L1PA16|LINE|L1 319625 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr19-6693 chr19 35559106 35559316 + 8.84 0.000 intron (NM_000704, intron 7 of 21) intron (NM_000704, intron 7 of 21) 4447 NM_000704 495 Hs.36992 NM_000704 ENSG00000105675 ATP4A ATP6A ATPase H+/K+ transporting subunit alpha protein-coding chr19-3209 chr19 50520924 50521134 + 8.84 0.000 intron (NM_001080457, intron 2 of 2) L1ME2|LINE|L1 -6345 NM_001024656 554235 Hs.436338 NM_001024656 ENSG00000204653 ASPDH - aspartate dehydrogenase domain containing protein-coding chr9-4866 chr9 2838999 2839209 + 8.84 0.000 intron (NM_014878, intron 1 of 17) intron (NM_014878, intron 1 of 17) 4991 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chr20-1349 chr20 24406944 24407154 + 8.84 0.000 Intergenic Intergenic -62150 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr10-3904 chr10 68863857 68864067 + 8.84 0.000 intron (NM_152709, intron 1 of 3) AluYk2|SINE|Alu 36425 NM_001130160 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr22-1234 chr22 45240475 45240685 + 8.84 0.000 intron (NM_001009880, intron 1 of 9) CpG 189 NM_001009880 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr4-1842 chr4 126209249 126209459 + 8.84 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 702095 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr4-4952 chr4 128104398 128104608 + 8.84 0.000 intron (NR_146772, intron 8 of 19) AluSx1|SINE|Alu 43191 NR_146772 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr2-5061 chr2 7111867 7112077 + 8.84 0.000 Intergenic Intergenic -34092 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr12-4010 chr12 29350222 29350432 + 8.84 0.000 intron (NM_016570, intron 8 of 13) Cheshire|DNA|hAT-Charlie 30845 NM_016570 51290 Hs.339453 NM_016570 ENSG00000087502 ERGIC2 CDA14|Erv41|PTX1|cd002 ERGIC and golgi 2 protein-coding chr4-7008 chr4 24110011 24110221 + 8.84 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) -220069 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr5-4053 chr5 43802216 43802426 + 8.84 0.000 Intergenic Intergenic -199091 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr4-2517 chr4 38934240 38934450 + 8.84 0.000 intron (NM_001350633, intron 10 of 12) intron (NM_001350633, intron 10 of 12) 66313 NR_030300 693159 NR_030300 ENSG00000207944 MIR574 MIR574-3p|MIRN574|hsa-mir-574|mir-574 microRNA 574 ncRNA chr5-2858 chr5 76818782 76818992 + 8.84 0.000 promoter-TSS (NM_005242) promoter-TSS (NM_005242) -143 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr10-2367 chr10 96941237 96941447 + 8.84 0.000 intron (NM_001170766, intron 4 of 8) SVA_E|Retroposon|SVA 108397 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr4-6107 chr4 15777972 15778182 + 8.84 0.000 promoter-TSS (NM_001775) promoter-TSS (NM_001775) -251 NR_132660 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr16-6585 chr16 66899955 66900165 + 8.84 0.000 Intergenic Intergenic 18825 NM_001204745 1014 Hs.513660 NM_004062 ENSG00000166589 CDH16 - cadherin 16 protein-coding chr17-5202 chr17 15106515 15106725 + 8.84 0.000 promoter-TSS (NR_103559) promoter-TSS (NR_103559) -433 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr15-4220 chr15 26802918 26803128 + 8.84 0.000 Intergenic L1MEc|LINE|L1 -29260 NM_021912 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr4-899 chr4 53377769 53377979 + 8.84 0.000 exon (NM_030917, exon 1 of 18) exon (NM_030917, exon 1 of 18) 221 NM_001134938 81608 Hs.555109 NM_030917 ENSG00000145216 FIP1L1 FIP1|Rhe|hFip1 factor interacting with PAPOLA and CPSF1 protein-coding chr8-2932 chr8 22156110 22156320 + 8.84 0.000 intron (NM_139278, intron 1 of 7) intron (NM_139278, intron 1 of 7) 591 NM_139278 203190 Hs.33470 NM_139278 ENSG00000168481 LGI3 LGIL4 leucine rich repeat LGI family member 3 protein-coding chr9-8611 chr9 128529212 128529422 + 8.84 0.000 intron (NM_001499, intron 9 of 13) L2|LINE|L2 -23270 NM_001195532 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr2-10670 chr2 22533148 22533358 + 8.84 0.000 Intergenic Intergenic -3226 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr12-3664 chr12 120347643 120347853 + 8.84 0.000 intron (NM_002442, intron 11 of 14) intron (NM_002442, intron 11 of 14) -19969 NM_000928 5319 Hs.992 NM_000928 ENSG00000170890 PLA2G1B PLA2|PLA2A|PPLA2 phospholipase A2 group IB protein-coding chr3-9725 chr3 67248675 67248885 + 8.84 0.000 Intergenic Intergenic 23316 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr11-7493 chr11 2508013 2508223 + 8.84 0.000 intron (NM_181798, intron 1 of 15) intron (NM_181798, intron 1 of 15) 46664 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr5-3784 chr5 72246386 72246596 + 8.84 0.000 intron (NM_001286748, intron 4 of 11) intron (NM_001286748, intron 4 of 11) 66704 NM_001324255 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr22-2428 chr22 19613925 19614135 + 8.84 0.000 Intergenic Intergenic -47191 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr12-4282 chr12 122185032 122185242 + 8.84 0.000 intron (NM_152759, intron 2 of 11) intron (NM_152759, intron 2 of 11) 2014 NM_001098519 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr21-658 chr21 38807683 38807893 + 8.84 0.000 intron (NM_001256295, intron 2 of 10) intron (NM_001256295, intron 2 of 10) 1859 NM_005239 2114 Hs.644231 NM_005239 ENSG00000157557 ETS2 ETS2IT1 ETS proto-oncogene 2, transcription factor protein-coding chr5-5023 chr5 84502124 84502334 + 8.84 0.000 Intergenic LTR40b|LTR|ERVL -117349 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr6-3423 chr6 111605272 111605482 + 8.84 0.000 intron (NM_147200, intron 1 of 9) intron (NM_147200, intron 1 of 9) 501 NM_147686 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr16-2117 chr16 2250821 2251031 + 8.84 0.000 intron (NM_001178029, intron 2 of 6) AluSx|SINE|Alu 661 NM_001178029 1632 Hs.403436 NM_001919 ENSG00000167969 ECI1 DCI enoyl-CoA delta isomerase 1 protein-coding chr13-3962 chr13 61648361 61648571 + 8.84 0.000 Intergenic MER20B|DNA|hAT-Charlie -220520 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr4-7599 chr4 81574526 81574736 + 8.84 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -102724 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr2-3344 chr2 217848675 217848885 + 8.84 0.000 exon (NM_022648, exon 17 of 33) exon (NM_022648, exon 17 of 33) -15047 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr9-7287 chr9 8536996 8537206 + 8.84 0.000 intron (NM_130392, intron 3 of 30) intron (NM_130392, intron 3 of 30) 196845 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr11-5838 chr11 8766058 8766268 + 8.84 0.000 intron (NM_005418, intron 4 of 22) intron (NM_005418, intron 4 of 22) -2615 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr9-5721 chr9 125875899 125876109 + 8.84 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 127821 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr6-3174 chr6 125818252 125818462 + 8.84 0.000 intron (NM_001199621, intron 2 of 14) intron (NM_001199621, intron 2 of 14) 501 NR_126386 104355145 Hs.590370 NR_126386 ENSG00000232131 NCOA7-AS1 - NCOA7 antisense RNA 1 ncRNA chr16-6978 chr16 86682691 86682901 + 8.84 0.000 Intergenic Intergenic 39163 NR_135181 101928614 Hs.399823 NR_135181 ENSG00000260026 LINC02189 - long intergenic non-protein coding RNA 2189 ncRNA chr15-4299 chr15 38692660 38692870 + 8.84 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -3833 NR_160786 chr6-5818 chr6 17984873 17985083 + 8.84 0.000 intron (NM_001243423, intron 2 of 2) intron (NM_001243423, intron 2 of 2) 2657 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr2-10197 chr2 98513682 98513892 + 8.84 0.000 intron (NM_001351428, intron 1 of 24) intron (NM_001351428, intron 1 of 24) 67777 NM_001351428 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr7-7864 chr7 5471995 5472205 + 8.84 0.000 intron (NM_001363441, intron 4 of 4) intron (NM_001363441, intron 4 of 4) 23817 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr3-10035 chr3 103607987 103608197 + 8.84 0.000 Intergenic L1M2b|LINE|L1 -83976 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr7-6732 chr7 5279506 5279716 + 8.84 0.000 Intergenic AluSx1|SINE|Alu -3332 NM_153247 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr2-11223 chr2 162745176 162745386 + 8.84 0.000 intron (NM_033272, intron 2 of 15) intron (NM_033272, intron 2 of 15) -23655 NR_110258 101929570 Hs.470445 NR_110258 ENSG00000237750 LOC101929570 - uncharacterized LOC101929570 ncRNA chr3-10114 chr3 112651477 112651687 + 8.84 0.000 Intergenic Intergenic -10439 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr3-5387 chr3 155436007 155436217 + 8.84 0.000 Intergenic Intergenic -49691 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr9-4756 chr9 132433124 132433334 + 8.84 0.000 intron (NM_001282957, intron 1 of 5) MIRb|SINE|MIR 23018 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr3-3672 chr3 144636687 144636897 + 8.84 0.000 Intergenic Intergenic 663711 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr16-2378 chr16 66408373 66408583 + 8.84 0.000 promoter-TSS (NR_046242) promoter-TSS (NR_046242) -46 NR_046242 100505865 Hs.314372 NR_046242 LINC00920 - long intergenic non-protein coding RNA 920 ncRNA chr11-5152 chr11 2528680 2528890 + 8.84 0.000 intron (NM_181798, intron 2 of 15) intron (NM_181798, intron 2 of 15) 67331 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr1-8896 chr1 6000223 6000433 + 8.84 0.000 intron (NM_001199861, intron 1 of 15) intron (NM_001199861, intron 1 of 15) 7652 NM_001199861 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr8-6986 chr8 108067417 108067627 + 8.84 0.000 intron (NM_178565, intron 2 of 5) L1MC5a|LINE|L1 14417 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr10-2622 chr10 80466282 80466492 + 8.84 0.000 intron (NM_001351268, intron 2 of 9) AluJo|SINE|Alu -1876 NM_001351272 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr13-1544 chr13 29435137 29435347 + 8.84 0.000 intron (NM_015233, intron 1 of 8) intron (NM_015233, intron 1 of 8) 6582 NM_015233 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr2-5381 chr2 101152374 101152584 + 8.84 0.000 non-coding (NR_135594, exon 1 of 2) non-coding (NR_135594, exon 1 of 2) 819 NR_135594 100506286 Hs.679790 NR_135594 ENSG00000272902 TBC1D8-AS1 - TBC1 domain family member 8 antisense RNA 1 ncRNA chr14-2084 chr14 71439549 71439759 + 8.84 0.000 intron (NM_001284247, intron 1 of 23) intron (NM_001284247, intron 1 of 23) 715 NM_001284247 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr2-11184 chr2 153918932 153919142 + 8.84 0.000 intron (NM_052917, intron 2 of 12) L2|LINE|L2 -25357 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr9-6237 chr9 123371658 123371868 + 8.84 0.000 intron (NM_173689, intron 8 of 12) MIRb|SINE|MIR 2984 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr4-7438 chr4 67501277 67501487 + 8.84 0.000 intron (NR_155754, intron 12 of 18) L1MC4|LINE|L1 44121 NR_155754 1060 Hs.479867 NM_001812 ENSG00000145241 CENPC CENP-C|CENPC1|MIF2|hcp-4 centromere protein C protein-coding chr9-4560 chr9 87972396 87972606 + 8.84 0.000 intron (NM_001170639, intron 2 of 6) intron (NM_001170639, intron 2 of 6) 2032 NM_001170639 23552 Hs.522274 NM_012119 ENSG00000156345 CDK20 CCRK|CDCH|P42|PNQALRE cyclin dependent kinase 20 protein-coding chr9-6864 chr9 80312412 80312622 + 8.84 0.000 Intergenic L1M5|LINE|L1 337494 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr2-8807 chr2 168562944 168563154 + 8.84 0.000 intron (NM_001256126, intron 3 of 10) intron (NM_001256126, intron 3 of 10) -19894 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr8-2826 chr8 127993095 127993305 + 8.84 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) -15698 NR_031611 100302170 NR_031611 ENSG00000283200 MIR1206 MIRN1206|hsa-mir-1206 microRNA 1206 ncRNA chr2-7056 chr2 163732966 163733176 + 8.84 0.000 intron (NM_001321825, intron 1 of 1) intron (NM_001321825, intron 1 of 1) 2937 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr6-8200 chr6 134391263 134391473 + 8.84 0.000 Intergenic Intergenic -46348 NR_038217 154092 Hs.223718 NR_038216 LINC01010 - long intergenic non-protein coding RNA 1010 ncRNA chr16-5939 chr16 3701651 3701861 + 8.84 0.000 intron (NM_016292, intron 1 of 17) intron (NM_016292, intron 1 of 17) 15768 NM_016292 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr19-4415 chr19 3768365 3768575 + 8.84 0.000 TTS (NM_032753) TTS (NM_032753) 3758 NM_032753 84839 Hs.532691 NM_032753 ENSG00000173976 RAX2 ARMD6|CORD11|QRX|RAXL1 retina and anterior neural fold homeobox 2 protein-coding chr15-2768 chr15 32956166 32956376 + 8.84 0.000 intron (NM_001277313, intron 9 of 20) intron (NM_001277313, intron 9 of 20) 111903 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr16-3250 chr16 87566001 87566211 + 8.84 0.000 Intergenic MIRb|SINE|MIR -35729 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr1-13264 chr1 226021405 226021615 + 8.84 0.000 Intergenic Intergenic -22167 NM_152608 163859 Hs.520192 NM_152608 ENSG00000143751 SDE2 C1orf55|dJ671D7.1 SDE2 telomere maintenance homolog protein-coding chrX-3351 chrX 136639538 136639748 + 8.84 0.000 promoter-TSS (NR_038461) promoter-TSS (NR_038461) 100 NR_038462 100128420 Hs.152595 NR_038461 ENSG00000233093 LINC00892 - long intergenic non-protein coding RNA 892 ncRNA chr21-995 chr21 14005418 14005628 + 8.84 0.000 Intergenic Intergenic -25079 NR_027270 391267 Hs.364456 NM_153750 ENSG00000215559 ANKRD20A11P C21orf81 ankyrin repeat domain 20 family member A11, pseudogene pseudo chr3-5665 chr3 12590085 12590295 + 8.84 0.000 intron (NR_148942, intron 12 of 16) intron (NR_148942, intron 12 of 16) 33103 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr5-7257 chr5 11678751 11678961 + 8.84 0.000 intron (NM_001288717, intron 2 of 20) intron (NM_001288717, intron 2 of 20) -89790 NM_001364128 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chrX-2113 chrX 26679002 26679212 + 8.84 0.000 Intergenic L1ME1|LINE|L1 120770 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr1-4286 chr1 16009191 16009401 + 8.84 0.000 TTS (NM_178840) TTS (NM_178840) 5060 NM_178840 149563 Hs.29190 NM_178840 ENSG00000183888 SRARP C1orf64|ERRF steroid receptor associated and regulated protein protein-coding chr16-6664 chr16 69533100 69533310 + 8.84 0.000 Intergenic MER20|DNA|hAT-Charlie 32663 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr2-10556 chr2 238700945 238701155 + 8.84 0.000 Intergenic Intergenic -145551 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr2-11922 chr2 25066278 25066488 + 8.84 0.000 intron (NM_001319099, intron 1 of 22) L2c|LINE|L2 23920 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr10-4313 chr10 19904116 19904326 + 8.84 0.000 intron (NM_032812, intron 1 of 13) L1PB1|LINE|L1 87789 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr11-2198 chr11 43788524 43788734 + 8.84 0.000 intron (NM_016142, intron 3 of 10) intron (NM_016142, intron 3 of 10) -92202 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr6-7630 chr6 79510706 79510916 + 8.84 0.000 intron (NM_001122769, intron 3 of 7) L1MD2|LINE|L1 26619 NM_001122769 167691 Hs.21945 NM_181714 ENSG00000135338 LCA5 C6orf152 lebercilin LCA5 protein-coding chr1-7050 chr1 179402629 179402839 + 8.84 0.000 intron (NR_073544, intron 11 of 25) L2|LINE|L2 36690 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr14-4967 chr14 75210154 75210364 + 8.84 0.000 Intergenic L2c|LINE|L2 -33647 NM_006827 10972 Hs.74137 NM_006827 ENSG00000170348 TMED10 P24(DELTA)|S31I125|S31III125|TMP21|Tmp-21-I|p23|p24d1 transmembrane p24 trafficking protein 10 protein-coding chr6-978 chr6 119147294 119147504 + 8.84 0.000 intron (NM_001288576, intron 1 of 15) intron (NM_001288576, intron 1 of 15) 1794 NM_001100411 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr11-4562 chr11 123707618 123707828 + 8.84 0.000 Intergenic Intergenic 23262 NM_001301819 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding chr1-16103 chr1 203676488 203676698 + 8.84 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 48656 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr11-3601 chr11 66388980 66389190 + 8.84 0.000 Intergenic LTR41|LTR|ERVL -16609 NM_001300868 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr14-3094 chr14 64512339 64512549 + 8.84 0.000 intron (NM_001123329, intron 1 of 1) intron (NM_001123329, intron 1 of 1) -7231 NM_001304508 7597 Hs.654571 NM_006977 ENSG00000089775 ZBTB25 C14orf51|KUP|ZNF46 zinc finger and BTB domain containing 25 protein-coding chr14-2949 chr14 48973149 48973359 + 8.84 0.000 Intergenic L1MEf|LINE|L1 613126 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr8-3820 chr8 29036422 29036632 + 8.84 0.000 intron (NM_001324384, intron 6 of 10) intron (NM_001324384, intron 6 of 10) 145213 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr3-11217 chr3 194573545 194573755 + 8.84 0.000 Intergenic MamGypLTR3|LTR|Gypsy -10618 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr18-1055 chr18 21341219 21341429 + 8.84 0.000 intron (NM_001142966, intron 1 of 32) intron (NM_001142966, intron 1 of 32) 99082 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr3-4643 chr3 30586498 30586708 + 8.84 0.000 Intergenic MIRb|SINE|MIR -19899 NM_001024847 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr10-4348 chr10 31320922 31321132 + 8.84 0.000 promoter-TSS (NM_001323665) promoter-TSS (NM_001323665) -108 NM_001128128 6935 Hs.124503 NM_030751 ENSG00000148516 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding chr5-7360 chr5 18815334 18815544 + 8.84 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 1008165 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr10-6042 chr10 127333243 127333453 + 8.84 0.000 intron (NM_001290223, intron 29 of 51) intron (NM_001290223, intron 29 of 51) -136757 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr2-7218 chr2 218985941 218986151 + 8.84 0.000 promoter-TSS (NM_017521) promoter-TSS (NM_017521) -389 NM_017521 54738 Hs.234759 NM_017521 ENSG00000163497 FEV HSRNAFEV|PET-1 FEV transcription factor, ETS family member protein-coding chr7-4199 chr7 134398232 134398442 + 8.84 0.000 Intergenic Intergenic 60763 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr1-2483 chr1 118987612 118987822 + 8.84 0.000 exon (NM_001330677, exon 1 of 8) exon (NM_001330677, exon 1 of 8) 626 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr3-4679 chr3 46445586 46445796 + 8.84 0.000 intron (NM_001321122, intron 14 of 19) intron (NM_001321122, intron 14 of 19) 17963 NM_001199149 4057 Hs.529517 NM_002343 ENSG00000012223 LTF GIG12|HEL110|HLF2|LF lactotransferrin protein-coding chr20-710 chr20 43507865 43508075 + 8.84 0.000 intron (NM_032107, intron 1 of 21) CpG 273 NM_032107 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chr11-10014 chr11 80466682 80466892 + 8.84 0.000 Intergenic L1PREC2|LINE|L1 296016 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr10-7865 chr10 47351700 47351910 + 8.84 0.000 intron (NM_002900, intron 1 of 3) MADE1|DNA|TcMar-Mariner 3442 NM_002900 5949 Hs.591928 NM_002900 ENSG00000265203 RBP3 D10S64|D10S65|D10S66|IRBP|RBPI|RP66 retinol binding protein 3 protein-coding chr20-4516 chr20 63588888 63589098 + 8.84 0.000 3' UTR (NM_012384, exon 10 of 10) 3' UTR (NM_012384, exon 10 of 10) -14754 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr12-2102 chr12 51974750 51974960 + 8.84 0.000 intron (NM_020327, intron 1 of 8) L2c|LINE|L2 21475 NM_020327 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr2-13218 chr2 122893400 122893610 + 8.84 0.000 Intergenic L1MB7|LINE|L1 179976 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr12-4968 chr12 76093843 76094053 + 8.84 0.000 Intergenic L1MC3|LINE|L1 -9263 NM_001330231 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr5-5256 chr5 120437105 120437315 + 8.84 0.000 Intergenic Intergenic -27068 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr1-1808 chr1 183472438 183472648 + 8.84 0.000 promoter-TSS (NR_040063) promoter-TSS (NR_040063) 44 NM_201568 9887 Hs.591463 NM_014837 ENSG00000116698 SMG7 C1orf16|EST1C|SGA56M SMG7 nonsense mediated mRNA decay factor protein-coding chr4-6788 chr4 7293897 7294107 + 8.84 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -16448 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr12-2080 chr12 3077681 3077891 + 8.84 0.000 intron (NM_001168320, intron 1 of 7) CpG 407 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr1-11689 chr1 6096166 6096376 + 8.84 0.000 intron (NM_001199863, intron 11 of 13) intron (NM_001199863, intron 11 of 13) 50383 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr12-5457 chr12 123983018 123983228 + 8.84 0.000 intron (NM_001347902, intron 2 of 4) AluJr|SINE|Alu 9908 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr1-2453 chr1 40477302 40477512 + 8.84 0.000 5' UTR (NM_001320179, exon 1 of 6) 5' UTR (NM_001320179, exon 1 of 6) 117 NM_001320179 339559 Hs.434385 NM_198494 ENSG00000187815 ZFP69 ZFP69A|ZKSCAN23A|ZNF642|ZSCAN54A ZFP69 zinc finger protein protein-coding chr6-1570 chr6 3912554 3912764 + 8.84 0.000 Intergenic Intergenic 63286 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr14-4328 chr14 22657116 22657326 + 8.84 0.000 Intergenic Intergenic -22377 NM_001348233 79549 NM_001348233 ENSG00000255804 OR6J1 OR6J1P|OR6J2 olfactory receptor family 6 subfamily J member 1 (gene/pseudogene) protein-coding chrX-2230 chrX 44448358 44448568 + 8.84 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 94396 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr21-1738 chr21 34559711 34559921 + 8.84 0.000 intron (NM_004414, intron 1 of 3) MIRc|SINE|MIR -32806 NM_001331016 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr9-8169 chr9 105510071 105510281 + 8.84 0.000 intron (NM_001287191, intron 8 of 13) intron (NM_001287191, intron 8 of 13) -9648 NR_104269 26134 Hs.113150 NR_104269 ENSG00000229419 RALGAPA1P1 GARNL2|GARNL2P|RALGAPA1P|bA235C23.1 Ral GTPase activating protein catalytic alpha subunit 1 pseudogene 1 pseudo chr15-2213 chr15 91445875 91446085 + 8.84 0.000 Intergenic Intergenic -17359 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr8-2293 chr8 123392581 123392791 + 8.84 0.000 intron (NM_014109, intron 1 of 27) L2a|LINE|L2 3761 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr7-4954 chr7 141439291 141439501 + 8.84 0.000 intron (NM_001195278, intron 3 of 3) intron (NM_001195278, intron 3 of 3) -112014 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr1-9253 chr1 24264850 24265060 + 8.84 0.000 Intergenic MIR3|SINE|MIR -54402 NM_198174 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chrX-4367 chrX 49753411 49753621 + 8.84 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -57532 NM_003785 8712 Hs.128231 NM_003785 ENSG00000068985 PAGE1 AL5|CT16.3|GAGE-9|GAGEB1|PAGE-1 PAGE family member 1 protein-coding chr1-10988 chr1 216684657 216684867 + 8.84 0.000 intron (NM_001134285, intron 3 of 8) intron (NM_001134285, intron 3 of 8) 38667 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr20-1673 chr20 33925892 33926102 + 8.84 0.000 Intergenic Intergenic -67914 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr12-1611 chr12 63668588 63668798 + 8.84 0.000 promoter-TSS (NM_173812) promoter-TSS (NM_173812) -200 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding chr5-2556 chr5 177489547 177489757 + 8.84 0.000 TTS (NM_213636) TTS (NM_213636) 7952 NM_203352 9260 Hs.533040 NM_005451 ENSG00000196923 PDLIM7 LMP1|LMP3 PDZ and LIM domain 7 protein-coding chr2-10922 chr2 73343434 73343644 + 8.84 0.000 Intergenic L2|LINE|L2 -42219 NM_015120 7840 Hs.184720 NM_015120 ENSG00000116127 ALMS1 ALSS ALMS1 centrosome and basal body associated protein protein-coding chr5-1495 chr5 123513371 123513581 + 8.84 0.000 intron (NM_001364148, intron 1 of 8) intron (NM_001364148, intron 1 of 8) 1299 NM_001364147 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr10-3265 chr10 125343134 125343344 + 8.84 0.000 Intergenic L1MB2|LINE|L1 -182209 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr1-13564 chr1 7702517 7702727 + 8.84 0.000 intron (NM_001349613, intron 1 of 11) intron (NM_001349613, intron 1 of 11) -2114 NM_001349619 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr6-4105 chr6 151294723 151294933 + 8.84 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) -30703 NM_144497 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr6-1973 chr6 153090542 153090752 + 8.84 0.000 intron (NM_012419, intron 1 of 4) Tigger7|DNA|TcMar-Tigger 40635 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr2-4209 chr2 204687943 204688153 + 8.84 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 142573 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr3-6961 chr3 163556874 163557084 + 8.84 0.000 Intergenic Intergenic -253678 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr18-3513 chr18 74621743 74621953 + 8.84 0.000 Intergenic Intergenic -9115 NM_017757 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chrX-1325 chrX 132633427 132633637 + 8.84 0.000 intron (NM_147175, intron 3 of 3) intron (NM_147175, intron 3 of 3) -34110 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr5-4658 chr5 36524781 36524991 + 8.84 0.000 Intergenic Intergenic -81469 NM_001289939 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr1-13126 chr1 200048280 200048490 + 8.84 0.000 exon (NM_003822, exon 4 of 7) exon (NM_003822, exon 4 of 7) 5560 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chrX-2852 chrX 140314465 140314675 + 8.84 0.000 Intergenic L1M1|LINE|L1 190490 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chrX-644 chrX 41104983 41105193 + 8.84 0.000 intron (NM_001039591, intron 1 of 44) Tigger9a|DNA|TcMar-Tigger 19643 NM_001039591 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr4-8121 chr4 126710649 126710859 + 8.84 0.000 Intergenic Intergenic -922203 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr21-525 chr21 37553089 37553299 + 8.84 0.000 Intergenic Intergenic 132895 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr4-5983 chr4 182555967 182556177 + 8.84 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 312670 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr1-10276 chr1 147724068 147724278 + 8.84 0.000 Intergenic Intergenic 36429 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chr4-6152 chr4 34361921 34362131 + 8.84 0.000 Intergenic MER50-int|LTR|ERV1 -92279 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr12-6459 chr12 94304914 94305124 + 8.84 0.000 intron (NM_005761, intron 30 of 30) intron (NM_005761, intron 30 of 30) 42498 NR_037687 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr19-5415 chr19 16734187 16734397 + 8.84 0.000 intron (NM_001007525, intron 3 of 18) AluY|SINE|Alu 3100 NM_001347994 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr5-6324 chr5 131532870 131533080 + 8.84 0.000 intron (NM_016340, intron 6 of 27) intron (NM_016340, intron 6 of 27) 102254 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr17-5861 chr17 67891504 67891714 + 8.84 0.000 intron (NM_004459, intron 6 of 29) intron (NM_004459, intron 6 of 29) 66106 NM_004459 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr17-8131 chr17 58272748 58272958 + 8.84 0.000 exon (NM_000250, exon 10 of 12) exon (NM_000250, exon 10 of 12) 8082 NM_000250 4353 Hs.458272 NM_000250 ENSG00000005381 MPO - myeloperoxidase protein-coding chr16-3067 chr16 58134914 58135124 + 8.84 0.000 Intergenic AluSx|SINE|Alu -5594 NR_136632 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr10-2382 chr10 102775959 102776169 + 8.84 0.000 promoter-TSS (NM_017787) promoter-TSS (NM_017787) -157 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr1-3624 chr1 45080117 45080327 + 8.84 0.000 intron (NM_020883, intron 2 of 13) L1MA2|LINE|L1 67968 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr14-1415 chr14 67331619 67331829 + 8.84 0.000 intron (NM_001256550, intron 14 of 14) intron (NM_001256550, intron 14 of 14) 28080 NM_015994 51382 Hs.272630 NM_015994 ENSG00000100554 ATP6V1D ATP6M|VATD|VMA8 ATPase H+ transporting V1 subunit D protein-coding chr5-6655 chr5 54311780 54311990 + 8.84 0.000 Intergenic Tigger10|DNA|TcMar-Tigger -1312 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr21-1576 chr21 14909134 14909344 + 8.84 0.000 intron (NR_146322, intron 1 of 3) AluJb|SINE|Alu 9429 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr11-2007 chr11 57434573 57434783 + 8.84 0.000 Intergenic L1ME3|LINE|L1 -7098 NM_017611 29015 Hs.99962 NM_014096 ENSG00000134802 SLC43A3 EEG1|ENBT1|FOAP-13|PRO1659|SEEEG-1 solute carrier family 43 member 3 protein-coding chrX-1015 chrX 47482578 47482788 + 8.84 0.000 promoter-TSS (NR_126059) promoter-TSS (NR_126059) -33 NR_126059 203414 Hs.597617 NR_126059 LINC01560 CXorf24 long intergenic non-protein coding RNA 1560 ncRNA chr19-4707 chr19 18885797 18886007 + 8.84 0.000 intron (NM_021267, intron 2 of 7) intron (NM_021267, intron 2 of 7) 10256 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr1-7940 chr1 174074885 174075095 + 8.84 0.000 Intergenic Intergenic -81918 NM_172071 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding chr2-4944 chr2 174522690 174522900 + 8.84 0.000 Intergenic Intergenic 35277 NR_104080 101954271 NR_104080 ENSG00000207507 RNU6-9 U6-9 RNA, U6 small nuclear 9 snRNA chr16-4645 chr16 74361972 74362182 + 8.84 0.000 intron (NR_026950, intron 1 of 14) AluJb|SINE|Alu 6178 NR_026950 283922 Hs.558726 NR_026950 ENSG00000214331 LOC283922 - pyruvate dehydrogenase phosphatase regulatory subunit pseudogene pseudo chr1-7384 chr1 27617050 27617260 + 8.84 0.000 intron (NM_001042747, intron 6 of 12) intron (NM_001042747, intron 6 of 12) 9085 NM_001042747 2268 Hs.1422 NM_005248 ENSG00000000938 FGR SRC2|c-fgr|c-src2|p55-Fgr|p55c-fgr|p58-Fgr|p58c-fgr FGR proto-oncogene, Src family tyrosine kinase protein-coding chr9-6504 chr9 99856582 99856792 + 8.84 0.000 intron (NM_006981, intron 7 of 7) intron (NM_006981, intron 7 of 7) 34802 NM_173199 8013 Hs.279522 NM_006981 ENSG00000119508 NR4A3 CHN|CSMF|MINOR|NOR1|TEC nuclear receptor subfamily 4 group A member 3 protein-coding chr2-5005 chr2 219558647 219558857 + 8.84 0.000 intron (NM_001173431, intron 9 of 13) MIRb|SINE|MIR -9605 NR_036082 100423039 NR_036082 ENSG00000265252 MIR3132 - microRNA 3132 ncRNA chr6-6275 chr6 36232923 36233133 + 8.84 0.000 TTS (NM_015695) TTS (NM_015695) -10140 NM_173676 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr21-1063 chr21 29799464 29799674 + 8.84 0.000 intron (NM_000830, intron 1 of 16) AluSz|SINE|Alu 51394 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA chr15-3276 chr15 77228853 77229063 + 8.84 0.000 intron (NM_024776, intron 4 of 7) intron (NM_024776, intron 4 of 7) -3554 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr6-2026 chr6 46192231 46192441 + 8.84 0.000 Intergenic Intergenic -21326 NM_001290073 59084 Hs.35198 NM_021572 ENSG00000112796 ENPP5 NPP-5|NPP5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 protein-coding chr6-7003 chr6 21710610 21710820 + 8.84 0.000 intron (NR_015410, intron 2 of 11) intron (NR_015410, intron 2 of 11) 44302 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr4-2161 chr4 92232647 92232857 + 8.84 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 44550 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr4-6143 chr4 29656413 29656623 + 8.84 0.000 Intergenic Intergenic 442226 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr6-6099 chr6 150024657 150024867 + 8.84 0.000 intron (NM_130900, intron 1 of 4) intron (NM_130900, intron 1 of 4) 770 NM_130900 154064 Hs.558659 NM_130900 ENSG00000155918 RAET1L ULBP6 retinoic acid early transcript 1L protein-coding chr15-2071 chr15 62302417 62302627 + 8.84 0.000 Intergenic Intergenic 2212 NR_107034 102465869 NR_107034 ENSG00000277919 MIR8067 hsa-mir-8067 microRNA 8067 ncRNA chr5-5578 chr5 149886082 149886292 + 8.84 0.000 intron (NM_000440, intron 14 of 21) intron (NM_000440, intron 14 of 21) 46790 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr7-6551 chr7 50148224 50148434 + 8.84 0.000 intron (NM_001161834, intron 7 of 8) intron (NM_001161834, intron 7 of 8) 52243 NM_001161834 100130988 Hs.99248 NM_001161834 ENSG00000164500 SPATA48 C7orf72 spermatogenesis associated 48 protein-coding chr8-3879 chr8 38076524 38076734 + 8.84 0.000 Intergenic MER49|LTR|ERV1 -28864 NM_001282272 9070 Hs.521530 NM_004674 ENSG00000129691 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ASH2 like, histone lysine methyltransferase complex subunit protein-coding chr3-3009 chr3 104437120 104437330 + 8.84 0.000 Intergenic Intergenic -913109 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr6-2999 chr6 43945108 43945318 + 8.84 0.000 Intergenic L1ME5|LINE|L1 54185 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chrX-4081 chrX 22800343 22800553 + 8.84 0.000 intron (NR_073010, intron 3 of 11) MLT1H|LTR|ERVL-MaLR -199512 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr5-4665 chr5 37170183 37170393 + 8.84 0.000 exon (NM_023073, exon 33 of 52) exon (NM_023073, exon 33 of 52) -78758 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chr18-2507 chr18 61702702 61702912 + 8.84 0.000 Intergenic LTR26|LTR|ERV1 -45369 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr20-4420 chr20 59917999 59918209 + 8.84 0.000 intron (NM_014258, intron 7 of 44) Cheshire|DNA|hAT-Charlie 15533 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding chr11-7088 chr11 122159152 122159362 + 8.84 0.000 intron (NR_024430, intron 2 of 3) intron (NR_024430, intron 2 of 3) -2144 NR_137186 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr13-910 chr13 50893692 50893902 + 8.84 0.000 intron (NR_046552, intron 1 of 2) intron (NR_046552, intron 1 of 2) -15881 NM_001142279 79621 Hs.306291 NM_024570 ENSG00000136104 RNASEH2B AGS2|DLEU8 ribonuclease H2 subunit B protein-coding chr2-12785 chr2 86340241 86340451 + 8.84 0.000 Intergenic Intergenic -2263 NM_001164730 65055 Hs.368884 NM_022912 ENSG00000068615 REEP1 C2orf23|HMN5B|SPG31|Yip2a receptor accessory protein 1 protein-coding chr8-6349 chr8 52254896 52255106 + 8.84 0.000 promoter-TSS (NM_001352839) promoter-TSS (NM_001352839) -509 NM_001352845 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr11-10671 chr11 127737310 127737520 + 8.84 0.000 Intergenic Intergenic 466345 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr4-2413 chr4 98578036 98578246 + 8.84 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 80470 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr11-8931 chr11 17708829 17709039 + 8.84 0.000 Intergenic Intergenic -10637 NM_002478 4654 Hs.181768 NM_002478 ENSG00000129152 MYOD1 MYF3|MYOD|PUM|bHLHc1 myogenic differentiation 1 protein-coding chr19-3855 chr19 18400368 18400578 + 8.84 0.000 Intergenic AluSc5|SINE|Alu -2851 NM_145256 126364 Hs.332156 NM_145256 ENSG00000175489 LRRC25 MAPA leucine rich repeat containing 25 protein-coding chr21-293 chr21 9246125 9246335 + 8.84 0.000 Intergenic Intergenic -116469 NR_038328 100132288 Hs.487562 NM_174948 ENSG00000188681 TEKT4P2 MAFIPL|TEKT4P tektin 4 pseudogene 2 pseudo chr21-588 chr21 43034380 43034590 + 8.84 0.000 TTS (NM_001320694) TTS (NM_001320694) 33919 NM_001321072 875 Hs.533013 NM_000071 ENSG00000160200 CBS CBSL|HIP4 cystathionine-beta-synthase protein-coding chr1-6556 chr1 31127229 31127439 + 8.84 0.000 Intergenic L1ME3G|LINE|L1 -61617 NM_001020658 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr11-5291 chr11 41849003 41849213 + 8.84 0.000 Intergenic MER49|LTR|ERV1 134540 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA chr5-8636 chr5 139812405 139812615 + 8.84 0.000 intron (NM_032289, intron 2 of 14) intron (NM_032289, intron 2 of 14) 16702 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr3-6573 chr3 123604234 123604444 + 8.84 0.000 intron (NR_121654, intron 2 of 3) HAL1|LINE|L1 16209 NM_053032 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr18-1218 chr18 40450966 40451176 + 8.84 0.000 Intergenic L2|LINE|L2 384785 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr17-3863 chr17 47711802 47712012 + 8.84 0.000 3' UTR (NM_014726, exon 9 of 9) 3' UTR (NM_014726, exon 9 of 9) 16643 NM_014726 9755 Hs.94790 NM_014726 ENSG00000198933 TBKBP1 ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding chr2-14016 chr2 191386850 191387060 + 8.84 0.000 intron (NM_012223, intron 16 of 28) intron (NM_012223, intron 16 of 28) 141551 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr13-3980 chr13 64239412 64239622 + 8.84 0.000 Intergenic Intergenic -163506 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr10-3580 chr10 83907230 83907440 + 8.84 0.000 Intergenic LTR69|LTR|ERVL -230246 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr7-9331 chr7 128870820 128871030 + 8.84 0.000 3' UTR (NM_001195150, exon 2 of 2) 3' UTR (NM_001195150, exon 2 of 2) 4595 NM_001195150 100130705 Hs.641532 NM_001195150 ENSG00000272899 ATP6V1FNB - ATP6V1F neighbor protein-coding chr4-7788 chr4 96613926 96614136 + 8.84 0.000 intron (NR_147149, intron 3 of 3) ERVL-E-int|LTR|ERVL 303328 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr4-2581 chr4 104835030 104835240 + 8.84 0.000 Intergenic Intergenic -310740 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr2-12631 chr2 73062300 73062510 + 8.84 0.000 intron (NM_001330402, intron 1 of 12) intron (NM_001330402, intron 1 of 12) -3233 NM_001330410 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr11-9335 chr11 46339984 46340194 + 8.84 0.000 intron (NM_201532, intron 1 of 30) MIRb|SINE|MIR -5178 NM_201533 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr20-4417 chr20 59698911 59699121 + 8.84 0.000 intron (NM_001199506, intron 1 of 12) intron (NM_001199506, intron 1 of 12) -22194 NM_183246 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr2-5030 chr2 233935454 233935664 + 8.84 0.000 intron (NM_024080, intron 3 of 25) intron (NM_024080, intron 3 of 25) 18186 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|LTrpC-6|TRPP8|trp-p8 transient receptor potential cation channel subfamily M member 8 protein-coding chr1-6453 chr1 18642272 18642482 + 8.84 0.000 intron (NM_001135254, intron 4 of 8) intron (NM_001135254, intron 4 of 8) 11531 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr2-8542 chr2 132781110 132781320 + 8.84 0.000 exon (NM_207363, exon 15 of 20) exon (NM_207363, exon 15 of 20) -109689 NM_001077427 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr8-3554 chr8 126308843 126309053 + 8.84 0.000 Intergenic L2c|LINE|L2 -16547 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA chr13-815 chr13 26752557 26752767 + 8.84 0.000 Intergenic Intergenic 8124 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr3-9536 chr3 52525179 52525389 + 8.84 0.000 TTS (NM_015136) TTS (NM_015136) 8573 NM_001134231 64943 Hs.84753 NM_022908 ENSG00000168268 NT5DC2 - 5'-nucleotidase domain containing 2 protein-coding chr13-2598 chr13 73765716 73765926 + 8.84 0.000 intron (NM_007249, intron 5 of 7) intron (NM_007249, intron 5 of 7) 201577 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr20-2440 chr20 24467474 24467684 + 8.84 0.000 Intergenic Kanga11a|DNA|TcMar-Tc2 -1620 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr19-6625 chr19 31017092 31017302 + 8.84 0.000 Intergenic Intergenic -150313 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr15-2671 chr15 77660833 77661043 + 8.84 0.000 intron (NR_120361, intron 1 of 2) intron (NR_120361, intron 1 of 2) 887 NR_120361 101929478 Hs.569510 NR_120361 ENSG00000259281 LINGO1-AS2 - LINGO1 antisense RNA 2 ncRNA chr1-8662 chr1 206430394 206430604 + 8.84 0.000 intron (NM_015326, intron 13 of 21) intron (NM_015326, intron 13 of 21) -39977 NM_001193322 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of nuclear factor kappa B kinase subunit epsilon protein-coding chrX-3782 chrX 133593980 133594190 + 8.84 0.000 intron (NM_001164619, intron 6 of 6) AluSq|SINE|Alu -178596 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr6-2850 chr6 2426471 2426681 + 8.84 0.000 Intergenic L1MA5|LINE|L1 180823 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr11-7111 chr11 123451716 123451926 + 8.84 0.000 intron (NM_001367421, intron 2 of 20) intron (NM_001367421, intron 2 of 20) 21552 NM_001354837 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr12-2686 chr12 83512143 83512353 + 8.84 0.000 Intergenic Intergenic 825093 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr16-4146 chr16 4592271 4592481 + 8.84 0.000 intron (NM_001145011, intron 11 of 15) intron (NM_001145011, intron 11 of 15) 22512 NM_145253 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr3-2504 chr3 196969580 196969790 + 8.84 0.000 promoter-TSS (NM_025163) promoter-TSS (NM_025163) -852 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding chr4-6207 chr4 54568735 54568945 + 8.84 0.000 Intergenic MER20B|DNA|hAT-Charlie 38291 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr3-6335 chr3 80870335 80870545 + 8.84 0.000 Intergenic MER52A|LTR|ERV1 99736 NR_147145 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr11-3942 chr11 379142 379352 + 8.84 0.000 intron (NM_178537, intron 14 of 19) intron (NM_178537, intron 14 of 19) 9748 NM_178537 338707 Hs.148074 NM_178537 ENSG00000182272 B4GALNT4 - beta-1,4-N-acetyl-galactosaminyltransferase 4 protein-coding chr7-8469 chr7 48620921 48621131 + 8.84 0.000 intron (NM_152701, intron 59 of 61) intron (NM_152701, intron 59 of 61) -303521 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr15-3689 chr15 40972168 40972378 + 8.84 0.000 Intergenic MLT2B4|LTR|ERVL 18802 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr14-3593 chr14 36182505 36182715 + 8.84 0.000 Intergenic L1ME2z|LINE|L1 -5959 NR_049735 100886964 Hs.742592 NR_049735 PTCSC3 - papillary thyroid carcinoma susceptibility candidate 3 ncRNA chr3-8217 chr3 47057222 47057432 + 8.84 0.000 exon (NM_001349370, exon 14 of 20) exon (NM_001349370, exon 14 of 20) 45785 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr2-7639 chr2 27457941 27458151 + 8.84 0.000 intron (NM_015662, intron 27 of 47) intron (NM_015662, intron 27 of 47) 15665 NM_173853 200634 Hs.59509 NM_173853 ENSG00000157992 KRTCAP3 KCP3 keratinocyte associated protein 3 protein-coding chr16-4429 chr16 52708728 52708938 + 8.84 0.000 Intergenic Intergenic -101858 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr2-12860 chr2 96762645 96762855 + 8.84 0.000 intron (NM_020184, intron 1 of 6) intron (NM_020184, intron 1 of 6) 1848 NM_020184 26504 Hs.175043 NM_020184 ENSG00000158158 CNNM4 ACDP4 cyclin and CBS domain divalent metal cation transport mediator 4 protein-coding chr6-4577 chr6 43271058 43271268 + 8.84 0.000 intron (NM_032538, intron 13 of 14) intron (NM_032538, intron 13 of 14) -27097 NM_006672 10864 Hs.485438 NM_006672 ENSG00000137204 SLC22A7 NLT|OAT2|hOAT11 solute carrier family 22 member 7 protein-coding chr5-5643 chr5 156719844 156720054 + 8.84 0.000 intron (NM_001128209, intron 6 of 7) intron (NM_001128209, intron 6 of 7) -130346 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr3-8680 chr3 182794250 182794460 + 8.84 0.000 intron (NM_014616, intron 1 of 29) CpG 851 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr14-2872 chr14 33178679 33178889 + 8.84 0.000 intron (NM_001164749, intron 2 of 11) L1MB4|LINE|L1 239905 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr13-766 chr13 111371370 111371580 + 8.84 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 50833 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr10-2782 chr10 127792146 127792356 + 8.84 0.000 Intergenic Intergenic 55066 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr2-4694 chr2 219689208 219689418 + 8.84 0.000 Intergenic Intergenic 61683 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr7-7284 chr7 36906570 36906780 + 8.84 0.000 intron (NM_001206480, intron 16 of 21) FRAM|SINE|Alu 12757 NR_031604 100302113 NR_031604 ENSG00000221325 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA chrX-268 chrX 110795884 110796094 + 8.84 0.000 promoter-TSS (NM_001367204) promoter-TSS (NM_001367204) -172 NM_001367209 91851 Hs.496587 NM_145234 ENSG00000101938 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin like 1 protein-coding chr18-2846 chr18 7530078 7530288 + 8.84 0.000 Intergenic Intergenic -37133 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr4-3114 chr4 165760395 165760605 + 8.84 0.000 intron (NR_121676, intron 5 of 5) intron (NR_121676, intron 5 of 5) -17429 NR_121677 101928131 Hs.406479 NR_121677 LOC101928131 - uncharacterized LOC101928131 ncRNA chr8-4279 chr8 95298720 95298930 + 8.84 0.000 intron (NR_038206, intron 1 of 4) intron (NR_038206, intron 1 of 4) -29624 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr5-4298 chr5 150560920 150561130 + 8.84 0.000 Intergenic Intergenic -40051 NM_001166208 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr13-4042 chr13 74128119 74128329 + 8.84 0.000 intron (NM_007249, intron 1 of 7) MIR1_Amn|SINE|MIR 5705 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr9-5887 chr9 131887633 131887843 + 8.84 0.000 intron (NM_001253881, intron 4 of 6) intron (NM_001253881, intron 4 of 6) -147794 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr1-10217 chr1 114320666 114320876 + 8.84 0.000 Intergenic MER103C|DNA|hAT-Charlie -166902 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr4-3056 chr4 140737419 140737629 + 8.84 0.000 intron (NM_015130, intron 1 of 20) intron (NM_015130, intron 1 of 20) 18861 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr7-5894 chr7 94456729 94456939 + 8.84 0.000 Intergenic Intergenic -52975 NM_001363427 64921 Hs.260041 NM_022900 ENSG00000127995 CASD1 C7orf12|NBLA04196|SOAT CAS1 domain containing 1 protein-coding chr8-3119 chr8 56682294 56682504 + 8.84 0.000 Intergenic Intergenic -122576 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr13-2411 chr13 44059675 44059885 + 8.84 0.000 Intergenic Intergenic 37445 NR_026955 121838 Hs.201441 NR_026955 LINC00284 NCRNA00284 long intergenic non-protein coding RNA 284 ncRNA chr18-2686 chr18 58416299 58416509 + 8.84 0.000 Intergenic Intergenic -34670 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr1-11809 chr1 27445363 27445573 + 8.84 0.000 intron (NM_006990, intron 1 of 8) intron (NM_006990, intron 1 of 8) 44699 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr14-3008 chr14 54138435 54138645 + 8.84 0.000 Intergenic Intergenic -181649 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr16-3388 chr16 68019416 68019626 + 8.84 0.000 Intergenic AluJo|SINE|Alu -3610 NM_001282442 100131303 Hs.655900 NM_001282442 ENSG00000263201 DPEP2NB - DPEP2 neighbor protein-coding chrX-2968 chrX 18877446 18877656 + 8.84 0.000 Intergenic Intergenic -12745 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr9-4517 chr9 70485348 70485558 + 8.84 0.000 Intergenic Intergenic -70796 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr10-6436 chr10 22479916 22480126 + 8.84 0.000 Intergenic Intergenic -42092 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr2-5699 chr2 207143537 207143747 + 8.84 0.000 intron (NM_001270943, intron 1 of 3) intron (NM_001270943, intron 1 of 3) -9505 NM_001270944 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr16-6092 chr16 12132289 12132499 + 8.84 0.000 intron (NM_032167, intron 13 of 20) AluSx1|SINE|Alu 155660 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr11-4495 chr11 112654442 112654652 + 8.84 0.000 Intergenic LTR16A|LTR|ERVL -98745 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr12-3300 chr12 77152723 77152933 + 8.84 0.000 Intergenic Intergenic -87259 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr1-6894 chr1 119433155 119433365 + 8.84 0.000 Intergenic Intergenic 18110 NM_000198 3284 Hs.654399 NM_000198 ENSG00000203859 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding chrX-3724 chrX 118678864 118679074 + 8.84 0.000 intron (NM_144658, intron 48 of 52) AluJo|SINE|Alu -48637 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr10-2258 chr10 114374068 114374278 + 8.84 0.000 intron (NM_001351073, intron 1 of 19) intron (NM_001351073, intron 1 of 19) 30329 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr1-15845 chr1 180982160 180982370 + 8.84 0.000 intron (NM_005819, intron 7 of 7) intron (NM_005819, intron 7 of 7) -27378 NR_145481 103344928 Hs.665319 NR_145481 ENSG00000232586 KIAA1614-AS1 - KIAA1614 antisense RNA 1 ncRNA chr1-13779 chr1 17711221 17711431 + 8.84 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -44007 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr2-4696 chr2 220373908 220374118 + 8.84 0.000 Intergenic Intergenic -467448 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr7-5697 chr7 69569430 69569640 + 8.84 0.000 Intergenic Intergenic 28089 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr10-1780 chr10 72865643 72865853 + 8.84 0.000 intron (NM_001270679, intron 5 of 7) AluJb|SINE|Alu -27991 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr1-13854 chr1 20493964 20494174 + 8.84 0.000 Intergenic Intergenic -7859 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding chrX-4335 chrX 46667021 46667231 + 8.84 0.000 intron (NM_001257291, intron 5 of 16) MIRb|SINE|MIR 91992 NM_001257291 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr21-684 chr21 17427829 17428039 + 8.84 0.000 Intergenic L1MD2|LINE|L1 -10956 NR_037585 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chr14-4104 chr14 68469024 68469234 + 8.84 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 159658 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr8-5584 chr8 88508834 88509044 + 8.84 0.000 Intergenic L1MA9|LINE|L1 -181456 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr5-4351 chr5 168217186 168217396 + 8.84 0.000 intron (NM_001368145, intron 20 of 26) intron (NM_001368145, intron 20 of 26) 15081 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA chr14-3426 chr14 96995115 96995325 + 8.84 0.000 Intergenic Intergenic 51641 NR_104113 145249 Hs.592323 NR_104113 ENSG00000225163 LINC00618 C14orf63 long intergenic non-protein coding RNA 618 ncRNA chr7-5152 chr7 6150940 6151150 + 8.84 0.000 intron (NM_032172, intron 14 of 17) Tigger3b|DNA|TcMar-Tigger 21092 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr10-6797 chr10 8840607 8840817 + 8.84 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -57277 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LINC02676 - long intergenic non-protein coding RNA 2676 ncRNA chrX-1508 chrX 12909657 12909867 + 8.84 0.000 intron (NR_030727, intron 2 of 4) MIRb|SINE|MIR 3142 NM_016610 51311 Hs.660543 NM_016610 ENSG00000101916 TLR8 CD288 toll like receptor 8 protein-coding chr3-2024 chr3 57959374 57959584 + 8.84 0.000 Intergenic Intergenic -48943 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr8-5944 chr8 19678170 19678380 + 8.84 0.000 intron (NR_148898, intron 1 of 9) intron (NR_148898, intron 1 of 9) 4308 NM_018371 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr1-6090 chr1 113856059 113856269 + 8.84 0.000 promoter-TSS (NR_037864) promoter-TSS (NR_037864) -471 NR_037864 100287722 Hs.664669 NR_037864 ENSG00000226167 AP4B1-AS1 - AP4B1 antisense RNA 1 ncRNA chr18-1773 chr18 10626764 10626974 + 8.84 0.000 promoter-TSS (NR_146509) promoter-TSS (NR_146509) -449 NR_146509 102724470 NR_146509 LINC01887 - long intergenic non-protein coding RNA 1887 ncRNA chr9-3601 chr9 84076588 84076798 + 8.84 0.000 intron (NR_110995, intron 3 of 8) L1M1|LINE|L1 13250 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr11-6834 chr11 95576152 95576362 + 8.84 0.000 Intergenic MIRb|SINE|MIR 213525 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr6-5320 chr6 143738583 143738793 + 8.84 0.000 intron (NM_001100165, intron 2 of 11) AluJb|SINE|Alu 60723 NM_001100164 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr1-6296 chr1 1465591 1465801 + 8.84 0.000 intron (NM_001039211, intron 11 of 11) L1M3|LINE|L1 -6069 NM_031921 83858 Hs.729021 NM_031921 ENSG00000160072 ATAD3B AAA-TOB3|TOB3 ATPase family AAA domain containing 3B protein-coding chr1-15078 chr1 97102595 97102805 + 8.84 0.000 intron (NM_000110, intron 20 of 22) L2c|LINE|L2 6777 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr19-4946 chr19 44870563 44870773 + 8.84 0.000 intron (NM_001042724, intron 2 of 8) intron (NM_001042724, intron 2 of 8) -20552 NM_001128916 10452 Hs.655909 NM_006114 ENSG00000130204 TOMM40 C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 translocase of outer mitochondrial membrane 40 protein-coding chr2-7690 chr2 30846063 30846273 + 8.84 0.000 Intergenic Intergenic -38722 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr7-1929 chr7 38956831 38957041 + 8.84 0.000 Intergenic Intergenic -20973 NM_001370959 11281 Hs.137106 NM_007252 ENSG00000106536 POU6F2 RPF-1|WT5|WTSL POU class 6 homeobox 2 protein-coding chr10-3892 chr10 61760981 61761191 + 8.84 0.000 intron (NM_173554, intron 6 of 6) intron (NM_173554, intron 6 of 6) 98125 NM_173554 219621 Hs.673160 NM_173554 ENSG00000183346 CABCOCO1 C10orf107 ciliary associated calcium binding coiled-coil 1 protein-coding chr12-3275 chr12 68785479 68785689 + 8.84 0.000 Intergenic Intergenic 19910 NR_073494 100130075 Hs.744781 NR_073494 LOC100130075 - SUZ RNA binding domain containing 1 pseudogene pseudo chr4-6327 chr4 89837707 89837917 + 8.84 0.000 promoter-TSS (NM_007308) promoter-TSS (NM_007308) 492 NM_001146055 6622 Hs.21374 NM_000345 ENSG00000145335 SNCA NACP|PARK1|PARK4|PD1 synuclein alpha protein-coding chr2-2431 chr2 42794581 42794791 + 8.84 0.000 Intergenic Intergenic -2103 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr1-3612 chr1 35192340 35192550 + 8.84 0.000 non-coding (NR_136702, exon 1 of 12) non-coding (NR_136702, exon 1 of 12) 700 NR_136702 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr6-4778 chr6 74705413 74705623 + 8.84 0.000 Intergenic Intergenic 423264 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr15-1406 chr15 44009812 44010022 + 8.84 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) -131746 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chrX-1193 chrX 66479592 66479802 + 8.84 0.000 Intergenic L1MDa|LINE|L1 136333 NM_001242310 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chrX-1227 chrX 81120837 81121047 + 8.84 0.000 intron (NM_030763, intron 2 of 6) intron (NM_030763, intron 2 of 6) 80971 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr4-3179 chr4 3011165 3011375 + 8.84 0.000 intron (NM_001004056, intron 6 of 14) intron (NM_001004056, intron 6 of 14) 47699 NM_001004057 2868 Hs.32959 NM_005307 ENSG00000125388 GRK4 GPRK2L|GPRK4|GRK4a|IT11 G protein-coupled receptor kinase 4 protein-coding chr5-3660 chr5 155139732 155139942 + 8.84 0.000 Intergenic Intergenic 126082 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr7-9515 chr7 138952451 138952661 + 8.84 0.000 intron (NM_020910, intron 1 of 19) intron (NM_020910, intron 1 of 19) 28833 NM_001164665 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr4-7899 chr4 105921380 105921590 + 8.84 0.000 intron (NM_001184690, intron 3 of 12) intron (NM_001184690, intron 3 of 12) 26014 NM_001184692 255743 Hs.518921 NM_198278 ENSG00000168743 NPNT EGFL6L|POEM nephronectin protein-coding chr11-4085 chr11 29456750 29456960 + 8.84 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat -137558 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr7-4159 chr7 100472151 100472361 + 8.84 0.000 intron (NR_130119, intron 3 of 4) intron (NR_130119, intron 3 of 4) 6958 NM_030935 81628 Hs.469798 NM_030935 ENSG00000166925 TSC22D4 THG-1|THG1|TILZ2 TSC22 domain family member 4 protein-coding chr2-12366 chr2 51766785 51766995 + 8.84 0.000 intron (NR_135237, intron 6 of 10) L1MA8|LINE|L1 -603758 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr3-10095 chr3 110188778 110188988 + 8.84 0.000 Intergenic MSTA|LTR|ERVL-MaLR 586055 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr16-3023 chr16 31486174 31486384 + 8.84 0.000 intron (NM_003041, intron 5 of 13) intron (NM_003041, intron 5 of 13) 3156 NR_130783 6524 Hs.709195 NM_003041 ENSG00000140675 SLC5A2 SGLT2 solute carrier family 5 member 2 protein-coding chr2-8686 chr2 151043582 151043792 + 8.84 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 218176 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr13-3008 chr13 111322133 111322343 + 8.84 0.000 intron (NM_152324, intron 2 of 5) intron (NM_152324, intron 2 of 5) 1596 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr2-12701 chr2 77710201 77710411 + 8.84 0.000 Intergenic L2a|LINE|L2 -187873 NM_001282924 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr5-3857 chr5 132976552 132976762 + 8.84 0.000 Intergenic Cheshire|DNA|hAT-Charlie -13023 NM_014423 27125 Hs.519313 NM_014423 ENSG00000072364 AFF4 AF5Q31|CHOPS|MCEF AF4/FMR2 family member 4 protein-coding chr6-6010 chr6 108020633 108020843 + 8.84 0.000 Intergenic Intergenic 54003 NM_014028 28962 Hs.226780 NM_014028 ENSG00000081087 OSTM1 GIPN|GL|HSPC019|OPTB5 osteoclastogenesis associated transmembrane protein 1 protein-coding chr4-1527 chr4 128831204 128831414 + 8.84 0.000 intron (NM_001287443, intron 1 of 10) intron (NM_001287443, intron 1 of 10) 19465 NM_001287443 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr1-11995 chr1 91988196 91988406 + 8.84 0.000 intron (NM_001726, intron 12 of 18) intron (NM_001726, intron 12 of 18) 36149 NM_001726 676 Hs.482520 NM_001726 ENSG00000137948 BRDT BRD6|CT9|SPGF21 bromodomain testis associated protein-coding chr12-4804 chr12 55714010 55714220 + 8.84 0.000 Intergenic AluSx|SINE|Alu -1707 NM_001367993 3679 Hs.524484 NM_002206 ENSG00000135424 ITGA7 - integrin subunit alpha 7 protein-coding chr7-6366 chr7 150898535 150898745 + 8.84 0.000 Intergenic Intergenic 46123 NM_001272072 26 Hs.647097 NM_001091 ENSG00000002726 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase copper containing 1 protein-coding chr5-3687 chr5 181088396 181088606 + 8.84 0.000 Intergenic MER90|LTR|ERV1 36803 NM_001258283 26693 Hs.742585 NM_001258283 ENSG00000185372 OR2V1 OR2V1P|OST265 olfactory receptor family 2 subfamily V member 1 protein-coding chr2-6215 chr2 25951911 25952121 + 8.84 0.000 intron (NM_002254, intron 4 of 7) AluY|SINE|Alu 30481 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C - kinesin family member 3C protein-coding chr8-4316 chr8 98668087 98668297 + 8.84 0.000 intron (NM_001256313, intron 4 of 8) intron (NM_001256313, intron 4 of 8) 157479 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr22-1624 chr22 31474833 31475043 + 8.84 0.000 intron (NM_001164502, intron 2 of 16) intron (NM_001164502, intron 2 of 16) 14618 NM_001164501 56478 Hs.517559 NM_019843 ENSG00000184708 EIF4ENIF1 4E-T|Clast4 eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding chr13-2590 chr13 73335363 73335573 + 8.84 0.000 Intergenic Intergenic -228776 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr15-3701 chr15 42699039 42699249 + 8.84 0.000 intron (NM_020759, intron 26 of 32) L1MA6|LINE|L1 37984 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr10-6936 chr10 53676329 53676539 + 8.84 0.000 Intergenic Intergenic -809796 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr3-5668 chr3 12792583 12792793 + 8.84 0.000 Intergenic AluY|SINE|Alu -3992 NM_001162499 23066 Hs.343664 NM_012298 ENSG00000144712 CAND2 TIP120B|Tp120b cullin associated and neddylation dissociated 2 (putative) protein-coding KI270724.1-1 KI270724.1 2871 3081 + 8.84 0.000 NA NA NA NA chr9-4073 chr9 123343530 123343740 + 8.84 0.000 Intergenic Intergenic -12562 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr3-7378 chr3 68015089 68015299 + 8.84 0.000 intron (NM_001252216, intron 2 of 4) intron (NM_001252216, intron 2 of 4) 10947 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr2-8998 chr2 194409318 194409528 + 8.84 0.000 intron (NR_110222, intron 4 of 5) intron (NR_110222, intron 4 of 5) 65154 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr8-2872 chr8 139834409 139834619 + 8.84 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -131391 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr1-14922 chr1 85069273 85069483 + 8.84 0.000 intron (NM_001288563, intron 1 of 21) L2a|LINE|L2 7051 NM_145172 126820 Hs.97933 NM_145172 ENSG00000162643 WDR63 DIC3|NYD-SP29 WD repeat domain 63 protein-coding chr1-13248 chr1 219959466 219959676 + 8.84 0.000 Intergenic Intergenic -30920 NM_018713 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr14-2028 chr14 61033987 61034197 + 8.84 0.000 intron (NR_033344, intron 6 of 16) Plat_L3|LINE|CR1 -52402 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr12-6005 chr12 101961590 101961800 + 8.84 0.000 Intergenic Intergenic 84115 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr12-4222 chr12 105799237 105799447 + 8.84 0.000 Intergenic Intergenic 92568 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr1-15919 chr1 185763809 185764019 + 8.84 0.000 intron (NM_031935, intron 1 of 106) intron (NM_031935, intron 1 of 106) 29523 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr14-5411 chr14 104349610 104349820 + 8.84 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 126131 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr5-4945 chr5 76293782 76293992 + 8.84 0.000 intron (NM_014979, intron 8 of 12) MIRb|SINE|MIR -109398 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr19-4321 chr19 1540799 1541009 + 8.84 0.000 Intergenic AluSx|SINE|Alu 16827 NM_001243079 126520 Hs.195352 NM_001011716 ENSG00000185988 PLK5 PLK-5|PLK5P|SgK384ps polo like kinase 5 protein-coding chr8-5427 chr8 33691902 33692112 + 8.84 0.000 Intergenic MSTA|LTR|ERVL-MaLR -91901 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr17-8351 chr17 73873850 73874060 + 8.84 0.000 Intergenic THE1B|LTR|ERVL-MaLR -45418 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr12-5951 chr12 81257890 81258100 + 8.84 0.000 TTS (NM_001220480) TTS (NM_001220480) -21194 NR_120491 102724663 Hs.667264 NR_120491 ENSG00000257467 PPFIA2-AS1 - PPFIA2 antisense RNA 1 ncRNA chr10-2527 chr10 49397978 49398188 + 8.84 0.000 Intergenic CpG-2907 -1994 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding chr3-8054 chr3 4751656 4751866 + 8.84 0.000 promoter-TSS (NR_004428) promoter-TSS (NR_004428) -171 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr3-3266 chr3 63863046 63863256 + 8.84 0.000 intron (NM_025075, intron 1 of 7) intron (NM_025075, intron 1 of 7) 635 NM_001285404 80145 Hs.288151 NM_025075 ENSG00000163634 THOC7 NIF3L1BP1|fSAP24|hTREX30 THO complex 7 protein-coding chr21-585 chr21 35559202 35559412 + 8.84 0.000 intron (NR_073512, intron 1 of 2) intron (NR_073512, intron 1 of 2) 21457 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr5-2344 chr5 72507706 72507916 + 8.84 0.000 promoter-TSS (NM_152625) promoter-TSS (NM_152625) -401 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr14-3949 chr14 19171696 19171906 + 8.84 0.000 Intergenic L1MA3|LINE|L1 45271 NR_160525 114004396 Hs.650463 NR_160525 LNCRNA-ATB - long noncoding RNA activated by TGF-beta ncRNA chr3-3313 chr3 177571309 177571519 + 8.84 0.000 intron (NR_047568, intron 2 of 3) MSTC|LTR|ERVL-MaLR 129493 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr9-3730 chr9 115373586 115373796 + 8.84 0.000 intron (NR_163556, intron 4 of 7) intron (NR_163556, intron 4 of 7) 231873 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr1-14038 chr1 27496629 27496839 + 8.84 0.000 Intergenic Intergenic -6567 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr5-7150 chr5 2807291 2807501 + 8.84 0.000 Intergenic L1PA7|LINE|L1 55265 NM_001294337 153571 Hs.148486 NM_178569 ENSG00000186493 C5orf38 CEI|IRX2NB chromosome 5 open reading frame 38 protein-coding chr19-3063 chr19 2908985 2909195 + 8.84 0.000 intron (NM_001319083, intron 1 of 3) L1MB7|LINE|L1 1982 NM_001319083 126295 Hs.591378 NM_173480 ENSG00000171970 ZNF57 ZNF424 zinc finger protein 57 protein-coding chr2-11051 chr2 112664765 112664975 + 8.84 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger 18931 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding chr18-782 chr18 36296784 36296994 + 8.84 0.000 promoter-TSS (NM_025135) promoter-TSS (NM_025135) -824 NM_025135 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr9-8009 chr9 94292317 94292527 + 8.84 0.000 exon (NM_003448, exon 3 of 5) exon (NM_003448, exon 3 of 5) -33111 NR_160773 158257 Hs.652626 NR_046163 ENSG00000230262 LINC02603 MIRLET7DHG long intergenic non-protein coding RNA 2603 ncRNA chr4-4313 chr4 29784439 29784649 + 8.84 0.000 Intergenic MLT2A1|LTR|ERVL 570252 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr15-3958 chr15 42461231 42461441 + 8.84 0.000 intron (NM_001366845, intron 3 of 21) intron (NM_001366845, intron 3 of 21) -3769 NM_022473 64397 Hs.511143 NM_022473 ENSG00000103994 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding chr19-4944 chr19 44818409 44818619 + 8.84 0.000 intron (NM_001013257, intron 8 of 13) intron (NM_001013257, intron 8 of 13) 9455 NM_001013257 4059 Hs.625725 NM_005581 ENSG00000187244 BCAM AU|CD239|LU|MSK19 basal cell adhesion molecule (Lutheran blood group) protein-coding chr16-4589 chr16 67729260 67729470 + 8.84 0.000 exon (NM_001320239, exon 9 of 13) exon (NM_001320239, exon 9 of 13) -10049 NM_001243650 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr1-15450 chr1 154155472 154155682 + 8.84 0.000 promoter-TSS (NM_207308) promoter-TSS (NM_207308) -461 NM_207308 91181 Hs.67639 NM_207308 ENSG00000143552 NUP210L - nucleoporin 210 like protein-coding chr7-3632 chr7 42078267 42078477 + 8.84 0.000 intron (NM_000168, intron 3 of 14) intron (NM_000168, intron 3 of 14) 158837 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr4-7842 chr4 101898784 101898994 + 8.84 0.000 intron (NM_017935, intron 6 of 16) intron (NM_017935, intron 6 of 16) 85047 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr18-1633 chr18 52381530 52381740 + 8.84 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 41438 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr2-4103 chr2 149037957 149038167 + 8.84 0.000 promoter-TSS (NM_177964) promoter-TSS (NM_177964) -405 NM_001317006 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr13-2768 chr13 99265876 99266086 + 8.84 0.000 intron (NR_026644, intron 4 of 8) intron (NR_026644, intron 4 of 8) -7553 NM_001098200 2841 Hs.741589 NM_005292 ENSG00000125245 GPR18 - G protein-coupled receptor 18 protein-coding chr19-6423 chr19 15265519 15265729 + 8.84 0.000 exon (NM_014299, exon 5 of 12) exon (NM_014299, exon 5 of 12) 14827 NM_014299 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr5-7778 chr5 63046847 63047057 + 8.84 0.000 Intergenic MER6|DNA|TcMar-Tigger 468133 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr12-3578 chr12 32867139 32867349 + 8.84 0.000 intron (NM_001005242, intron 4 of 12) AluJo|SINE|Alu 29602 NM_004572 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr17-3123 chr17 29850077 29850287 + 8.84 0.000 intron (NM_001282129, intron 1 of 15) intron (NM_001282129, intron 1 of 15) -79721 NM_001145053 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr22-578 chr22 30387182 30387392 + 8.84 0.000 exon (NM_001017981, exon 1 of 9) exon (NM_001017981, exon 1 of 9) 124 NM_001017981 200312 Hs.592194 NM_001017981 ENSG00000099999 RNF215 - ring finger protein 215 protein-coding chr17-5830 chr17 65533042 65533252 + 8.84 0.000 intron (NM_001363813, intron 9 of 9) intron (NM_001363813, intron 9 of 9) 28501 NM_001363813 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr11-6326 chr11 62274931 62275141 + 8.84 0.000 Intergenic HERVH48-int|LTR|ERV1 4878 NM_002411 4250 Hs.46452 NM_002411 ENSG00000110484 SCGB2A2 MGB1|UGB2 secretoglobin family 2A member 2 protein-coding chr16-6197 chr16 27408101 27408311 + 8.84 0.000 intron (NM_181079, intron 2 of 9) L2b|LINE|L2 6032 NM_181078 50615 Hs.210546 NM_021798 ENSG00000103522 IL21R CD360|IMD56|NILR interleukin 21 receptor protein-coding chr20-3325 chr20 20491384 20491594 + 8.84 0.000 intron (NM_020343, intron 36 of 39) intron (NM_020343, intron 36 of 39) 123385 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr2-6769 chr2 44955701 44955911 + 8.84 0.000 Intergenic CpG -13928 NR_103786 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 SIX3OS SIX3 antisense RNA 1 ncRNA chr2-7470 chr2 15206025 15206235 + 8.84 0.000 intron (NR_052013, intron 47 of 50) THE1D-int|LTR|ERVL-MaLR 355204 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr6-7887 chr6 107776923 107777133 + 8.84 0.000 intron (NM_198081, intron 1 of 7) HAL1b|LINE|L1 -44878 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr4-7851 chr4 102531168 102531378 + 8.84 0.000 intron (NM_001165412, intron 3 of 23) intron (NM_001165412, intron 3 of 23) -28787 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chrX-963 chrX 103343330 103343540 + 8.84 0.000 Intergenic Intergenic -13071 NM_016303 51186 Hs.533287 NM_016303 ENSG00000185222 TCEAL9 WBP5|WEX6 transcription elongation factor A like 9 protein-coding chrX-4906 chrX 108072738 108072948 + 8.84 0.000 intron (NM_182607, intron 4 of 6) intron (NM_182607, intron 4 of 6) 18699 NM_002814 5716 Hs.522752 NM_002814 ENSG00000101843 PSMD10 dJ889N15.2|p28|p28(GANK) proteasome 26S subunit, non-ATPase 10 protein-coding chrX-3603 chrX 82494289 82494499 + 8.84 0.000 Intergenic MLT1B-int|LTR|ERVL-MaLR -1013896 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr20-3831 chr20 24413542 24413752 + 8.84 0.000 Intergenic MIRb|SINE|MIR -55552 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr3-2609 chr3 171863169 171863379 + 8.84 0.000 Intergenic Intergenic 19925 NM_001164436 389177 Hs.642307 NM_001164436 ENSG00000186329 TMEM212 - transmembrane protein 212 protein-coding chr4-4317 chr4 31167343 31167553 + 8.84 0.000 Intergenic MLT2A2|LTR|ERVL -3696 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA chr2-9335 chr2 225551834 225552044 + 8.84 0.000 intron (NM_001371273, intron 4 of 7) AluSq|SINE|Alu 151053 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr6-4098 chr6 150222245 150222455 + 8.84 0.000 intron (NM_030949, intron 3 of 3) L1MC1|LINE|L1 79306 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr7-4384 chr7 79176946 79177156 + 8.84 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) 168063 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr20-1232 chr20 32483861 32484071 + 8.84 0.000 promoter-TSS (NM_080616) promoter-TSS (NM_080616) -476 NM_001351680 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr1-16537 chr1 232413870 232414080 + 8.84 0.000 intron (NM_020808, intron 17 of 20) intron (NM_020808, intron 17 of 20) 101633 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr18-1299 chr18 66159824 66160034 + 8.84 0.000 Intergenic Intergenic 408917 NM_001317214 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr4-5024 chr4 140012769 140012979 + 8.84 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -115141 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr18-3256 chr18 49962863 49963073 + 8.84 0.000 exon (NM_001080467, exon 11 of 40) exon (NM_001080467, exon 11 of 40) 148945 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr3-5790 chr3 26487871 26488081 + 8.84 0.000 Intergenic L2|LINE|L2 -134830 NM_052953 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr18-1825 chr18 21484925 21485135 + 8.84 0.000 intron (NM_001142966, intron 17 of 32) Tigger15a|DNA|TcMar-Tigger 115674 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding chr3-3033 chr3 119782337 119782547 + 8.84 0.000 promoter-TSS (NM_022002) promoter-TSS (NM_022002) -268 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding chr8-1407 chr8 52146830 52147040 + 8.84 0.000 intron (NM_001352876, intron 14 of 23) intron (NM_001352876, intron 14 of 23) -47427 NR_134310 101929341 Hs.147170 NR_134310 ENSG00000253551 LOC101929341 - uncharacterized LOC101929341 ncRNA chr7-8463 chr7 48306456 48306666 + 8.84 0.000 intron (NM_152701, intron 23 of 61) intron (NM_152701, intron 23 of 61) 135103 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chrX-3548 chrX 64023223 64023433 + 8.84 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 182380 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding chr1-4370 chr1 151708300 151708510 + 8.84 0.000 intron (NM_007185, intron 5 of 12) intron (NM_007185, intron 5 of 12) 8398 NM_007185 11189 Hs.26047 NM_007185 ENSG00000159409 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP Elav-like family member 3 protein-coding chr6-1975 chr6 155883380 155883590 + 8.84 0.000 Intergenic Intergenic -63312 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr7-8287 chr7 39160949 39161159 + 8.84 0.000 intron (NM_001370959, intron 2 of 9) intron (NM_001370959, intron 2 of 9) -147487 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr14-1493 chr14 39374669 39374879 + 8.84 0.000 intron (NM_001354155, intron 22 of 22) L3|LINE|CR1 57726 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr5-7149 chr5 2675619 2675829 + 8.84 0.000 Intergenic Intergenic -36867 NR_145480 101234261 NR_145480 ENSG00000281560 LSINCT5 - long stress-induced non-coding transcript 5 ncRNA chr12-4297 chr12 124303186 124303396 + 8.84 0.000 intron (NM_001365156, intron 1 of 2) intron (NM_001365156, intron 1 of 2) 8198 NM_001365156 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr6-1914 chr6 35662928 35663138 + 8.84 0.000 intron (NM_001145775, intron 2 of 11) intron (NM_001145775, intron 2 of 11) 1756 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr8-1949 chr8 55528516 55528726 + 8.84 0.000 3' UTR (NM_052898, exon 3 of 3) 3' UTR (NM_052898, exon 3 of 3) -7643 NR_134323 105375843 Hs.662416 NR_134323 ENSG00000254357 LOC105375843 - uncharacterized LOC105375843 ncRNA chr4-2586 chr4 110854252 110854462 + 8.84 0.000 Intergenic Intergenic 6290 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr4-6993 chr4 22875619 22875829 + 8.84 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 161635 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr12-5597 chr12 48014931 48015141 + 8.84 0.000 Intergenic Intergenic -10560 NM_033150 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr12-4436 chr12 10043686 10043896 + 8.84 0.000 intron (NM_207345, intron 2 of 8) AluSc5|SINE|Alu 13109 NM_207345 283420 Hs.531189 NM_207345 ENSG00000197992 CLEC9A CD370|DNGR-1|DNGR1|UNQ9341 C-type lectin domain containing 9A protein-coding chr3-4572 chr3 173661049 173661259 + 8.84 0.000 intron (NM_001365928, intron 3 of 6) intron (NM_001365928, intron 3 of 6) 76720 NM_001365934 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr4-5440 chr4 20462569 20462779 + 8.84 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) -65601 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr16-4270 chr16 24363789 24363999 + 8.84 0.000 Intergenic Intergenic 108341 NM_006539 10368 Hs.7235 NM_006539 ENSG00000006116 CACNG3 - calcium voltage-gated channel auxiliary subunit gamma 3 protein-coding chrX-2754 chrX 129618668 129618878 + 8.84 0.000 Intergenic MIR|SINE|MIR 36183 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr13-2165 chr13 112725700 112725910 + 8.84 0.000 intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 28926 NR_046661 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr10-7786 chr10 36038549 36038759 + 8.84 0.000 Intergenic LTR33|LTR|ERVL 260352 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr8-5825 chr8 4730396 4730606 + 8.84 0.000 intron (NM_033225, intron 1 of 69) AluY|SINE|Alu 264413 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr19-3145 chr19 30683139 30683349 + 8.84 0.000 intron (NM_001352260, intron 5 of 5) intron (NM_001352260, intron 5 of 5) 310860 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr5-3316 chr5 126808726 126808936 + 8.84 0.000 intron (NR_134488, intron 3 of 11) intron (NR_134488, intron 3 of 11) 31695 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr18-2922 chr18 13090878 13091088 + 8.84 0.000 intron (NM_032142, intron 33 of 44) intron (NM_032142, intron 33 of 44) 99621 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr9-2801 chr9 120931826 120932036 + 8.84 0.000 Intergenic Intergenic -2758 NM_001190945 7185 Hs.531251 NM_005658 ENSG00000056558 TRAF1 EBI6|MGC:10353 TNF receptor associated factor 1 protein-coding chr7-9409 chr7 132156682 132156892 + 8.84 0.000 intron (NM_020911, intron 25 of 31) intron (NM_020911, intron 25 of 31) -104074 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr6-4923 chr6 97946578 97946788 + 8.84 0.000 Intergenic L2a|LINE|L2 -77848 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr17-5361 chr17 30576316 30576526 + 8.84 0.000 promoter-TSS (NR_015341) promoter-TSS (NR_015341) -44 NR_015341 107133515 Hs.568209 NR_015341 SMURF2P1-LRRC37BP1 - SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene pseudo chr12-6251 chr12 41780179 41780389 + 8.84 0.000 Intergenic Intergenic 16095 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr1-16371 chr1 220967053 220967263 + 8.84 0.000 Intergenic Intergenic -87018 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr11-7246 chr11 11233881 11234091 + 8.84 0.000 Intergenic Intergenic 119264 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr12-3573 chr12 28172484 28172694 + 8.84 0.000 Intergenic LFSINE_Vert|SINE|tRNA -17867 NM_001352083 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding chr4-6948 chr4 18192627 18192837 + 8.84 0.000 Intergenic Intergenic -170857 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr4-4570 chr4 74860146 74860356 + 8.84 0.000 Intergenic L1PA8|LINE|L1 -65728 NM_001316963 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr4-6647 chr4 2021985 2022195 + 8.84 0.000 Intergenic LTR5B|LTR|ERVK -13116 NM_005663 7469 Hs.21771 NM_005663 ENSG00000185049 NELFA NELF-A|P/OKcl.15|WHSC2 negative elongation factor complex member A protein-coding chr8-2513 chr8 21228508 21228718 + 8.84 0.000 Intergenic Intergenic -69626 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA chr4-7281 chr4 51921610 51921820 + 8.84 0.000 Intergenic Intergenic 78136 NM_001287755 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr20-4111 chr20 41352803 41353013 + 8.84 0.000 intron (NM_001301860, intron 11 of 19) intron (NM_001301860, intron 11 of 19) 12087 NM_001301860 64900 Hs.25897 NM_022896 ENSG00000132793 LPIN3 LIPN3L|SMP2 lipin 3 protein-coding chrX-3465 chrX 28871840 28872050 + 8.84 0.000 intron (NM_014271, intron 2 of 10) intron (NM_014271, intron 2 of 10) 284499 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr2-9803 chr2 130926181 130926391 + 8.84 0.000 intron (NM_001367493, intron 2 of 13) L1ME3B|LINE|L1 89372 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr17-4769 chr17 44375247 44375457 + 8.84 0.000 intron (NM_000419, intron 26 of 29) intron (NM_000419, intron 26 of 29) -11499 NM_198475 284069 Hs.154001 NM_198475 ENSG00000161682 FAM171A2 - family with sequence similarity 171 member A2 protein-coding chr17-7925 chr17 44640192 44640402 + 8.84 0.000 Intergenic AluSx1|SINE|Alu 10052 NR_110661 101927017 Hs.560554 NR_110661 ENSG00000266979 LINC01180 - long intergenic non-protein coding RNA 1180 ncRNA chr6-1930 chr6 52545039 52545249 + 8.84 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 31916 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr15-3845 chr15 83793212 83793422 + 8.84 0.000 intron (NM_207517, intron 4 of 29) L1MA8|LINE|L1 139194 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr12-7468 chr12 64438520 64438730 + 8.84 0.000 intron (NM_007235, intron 22 of 24) intron (NM_007235, intron 22 of 24) -13495 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr8-3502 chr8 108120299 108120509 + 8.84 0.000 Intergenic Intergenic -36784 NM_178565 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr15-4825 chr15 73506353 73506563 + 8.84 0.000 intron (NM_001348772, intron 2 of 4) intron (NM_001348772, intron 2 of 4) 63085 NR_103844 101241892 Hs.656678 NR_103844 ENSG00000281183 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1 ncRNA chr1-11597 chr1 212949327 212949537 + 8.84 0.000 Intergenic Intergenic -1109 NM_024749 79805 Hs.96885 NM_024749 ENSG00000143494 VASH2 - vasohibin 2 protein-coding chr2-9088 chr2 203809340 203809550 + 8.84 0.000 Intergenic L2a|LINE|L2 -58326 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr1-9165 chr1 20159148 20159358 + 8.84 0.000 Intergenic HERVE-int|LTR|ERV1 18186 NM_001367969 391013 Hs.512512 NM_001105572 ENSG00000187980 PLA2G2C - phospholipase A2 group IIC protein-coding chr18-3423 chr18 63648342 63648552 + 8.84 0.000 Intergenic LTR14C|LTR|ERVK -4191 NM_002974 6318 Hs.123035 NM_002974 ENSG00000206073 SERPINB4 LEUPIN|PI11|SCCA-2|SCCA1|SCCA2 serpin family B member 4 protein-coding chr3-7097 chr3 181043162 181043372 + 8.84 0.000 Intergenic L1PA5|LINE|L1 -13413 NR_075091 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr2-14187 chr2 206948111 206948321 + 8.84 0.000 intron (NM_173077, intron 1 of 8) L1MC1|LINE|L1 8698 NM_173077 130749 Hs.684103 NM_173077 ENSG00000144410 CPO - carboxypeptidase O protein-coding chr10-8924 chr10 115764032 115764242 + 8.84 0.000 intron (NM_207303, intron 27 of 28) intron (NM_207303, intron 27 of 28) 430652 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr11-8379 chr11 89375501 89375711 + 8.84 0.000 intron (NM_001143837, intron 14 of 20) AluSx|SINE|Alu 115154 NM_001291929 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr19-5900 chr19 47638582 47638792 + 8.84 0.000 intron (NM_015711, intron 1 of 14) AluSx1|SINE|Alu 30491 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr4-3149 chr4 181685984 181686194 + 8.84 0.000 Intergenic Intergenic 143884 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr22-2848 chr22 44664277 44664487 + 8.84 0.000 Intergenic Intergenic -4165 NM_001017529 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr1-8463 chr1 112375701 112375911 + 8.84 0.000 Intergenic L1MC5a|LINE|L1 -20408 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr2-9217 chr2 217793482 217793692 + 8.84 0.000 Intergenic L2b|LINE|L2 -36994 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr14-1835 chr14 55690517 55690727 + 8.84 0.000 Intergenic MSTB|LTR|ERVL-MaLR -75623 NR_004844 645683 Hs.663461 NR_004844 ENSG00000177350 RPL13AP3 RPL13A_11_1370 ribosomal protein L13a pseudogene 3 pseudo chr2-4844 chr2 79589120 79589330 + 8.84 0.000 intron (NM_001282598, intron 1 of 17) L4_B_Mam|LINE|RTE-X 60134 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA chr8-4521 chr8 122675540 122675750 + 8.84 0.000 intron (NR_126348, intron 2 of 3) intron (NR_126348, intron 2 of 3) 18461 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr7-7970 chr7 13257727 13257937 + 8.84 0.000 Intergenic Intergenic 570199 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr15-4385 chr15 42668110 42668320 + 8.84 0.000 intron (NM_020759, intron 15 of 32) intron (NM_020759, intron 15 of 32) 68913 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr2-5438 chr2 120765169 120765379 + 8.84 0.000 intron (NM_001371271, intron 1 of 13) intron (NM_001371271, intron 1 of 13) -27007 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr20-2402 chr20 19260797 19261007 + 8.84 0.000 intron (NR_024564, intron 5 of 7) intron (NR_024564, intron 5 of 7) 23694 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr5-4025 chr5 34959501 34959711 + 8.84 0.000 TTS (NM_001348420) TTS (NM_001348420) 30013 NM_194283 134218 Hs.131887 NM_194283 ENSG00000168724 DNAJC21 BMFS3|DNAJA5|GS3|JJJ1 DnaJ heat shock protein family (Hsp40) member C21 protein-coding chr17-1225 chr17 49361797 49362007 + 8.84 0.000 promoter-TSS (NR_110882) promoter-TSS (NR_110882) 348 NM_001145365 22834 Hs.463375 NM_014897 ENSG00000198740 ZNF652 - zinc finger protein 652 protein-coding chr4-7887 chr4 105196697 105196907 + 8.84 0.000 intron (NM_001127208, intron 2 of 10) L2c|LINE|L2 50117 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr7-3902 chr7 115712183 115712393 + 8.84 0.000 Intergenic Intergenic -130847 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr8-5923 chr8 18393283 18393493 + 8.84 0.000 intron (NM_000015, intron 1 of 1) LTR49-int|LTR|ERV1 2106 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr2-4563 chr2 70087675 70087885 + 8.84 0.000 promoter-TSS (NR_033872) promoter-TSS (NR_033872) 303 NM_006196 5093 Hs.2853 NM_006196 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding chr11-7596 chr11 42236820 42237030 + 8.84 0.000 intron (NR_038309, intron 4 of 5) L1MA6|LINE|L1 16765 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr1-12439 chr1 13792501 13792711 + 8.84 0.000 intron (NM_012231, intron 8 of 9) intron (NM_012231, intron 8 of 9) 43191 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr14-2907 chr14 38608466 38608676 + 8.84 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -274025 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr2-6063 chr2 143205393 143205603 + 8.84 0.000 intron (NM_018460, intron 3 of 13) L2a|LINE|L2 76079 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr3-4021 chr3 65619382 65619592 + 8.84 0.000 intron (NM_001365904, intron 2 of 24) intron (NM_001365904, intron 2 of 24) -274329 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr2-7573 chr2 25054211 25054421 + 8.84 0.000 intron (NM_001319099, intron 1 of 22) intron (NM_001319099, intron 1 of 22) 11853 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr15-2046 chr15 55883081 55883291 + 8.84 0.000 intron (NM_001329212, intron 5 of 28) L1MA3|LINE|L1 33945 NR_104302 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr10-5719 chr10 101081712 101081922 + 8.84 0.000 Intergenic Intergenic 15518 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr11-7267 chr11 22615874 22616084 + 8.84 0.000 Intergenic L1MA1|LINE|L1 9862 NM_022725 2188 Hs.632151 NM_022725 ENSG00000183161 FANCF FAF FA complementation group F protein-coding chr17-4276 chr17 68013781 68013991 + 8.84 0.000 Intergenic MLT2A1|LTR|ERVL -20280 NM_181656 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr4-8623 chr4 172873321 172873531 + 8.84 0.000 intron (NM_001034845, intron 7 of 12) MLT1G|LTR|ERVL-MaLR -146548 NR_125894 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr9-6452 chr9 84891721 84891931 + 8.84 0.000 intron (NM_001018064, intron 13 of 17) intron (NM_001018064, intron 13 of 17) 185925 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chrX-3830 chrX 150703338 150703548 + 8.84 0.000 intron (NR_148676, intron 2 of 16) intron (NR_148676, intron 2 of 16) -8312 NM_001353995 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr17-3408 chr17 5277658 5277868 + 8.84 0.000 Intergenic L3|LINE|CR1 -4521 NM_001291582 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr7-3979 chr7 134896565 134896775 + 8.84 0.000 intron (NM_033139, intron 1 of 12) intron (NM_033139, intron 1 of 12) 5212 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr1-13875 chr1 21543107 21543317 + 8.84 0.000 intron (NM_001177520, intron 1 of 9) intron (NM_001177520, intron 1 of 9) -8058 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr22-3099 chr22 48307909 48308119 + 8.84 0.000 Intergenic Intergenic 33650 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr11-7326 chr11 63002360 63002570 + 8.84 0.000 intron (NM_001184736, intron 1 of 9) L1MA7|LINE|L1 13376 NM_004254 9376 Hs.266223 NM_004254 ENSG00000149452 SLC22A8 OAT3 solute carrier family 22 member 8 protein-coding chr10-4199 chr10 103590382 103590592 + 8.84 0.000 3' UTR (NM_004210, exon 6 of 6) 3' UTR (NM_004210, exon 6 of 6) -73045 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr6-4338 chr6 17214517 17214727 + 8.84 0.000 Intergenic Intergenic -66739 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr1-6725 chr1 63202676 63202886 + 8.84 0.000 intron (NR_038252, intron 4 of 11) intron (NR_038252, intron 4 of 11) 114476 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr5-5330 chr5 129152772 129152982 + 8.84 0.000 Intergenic L1PA7|LINE|L1 55189 NR_039776 100616175 NR_039776 ENSG00000264563 MIR4633 - microRNA 4633 ncRNA chr11-4949 chr11 66455931 66456141 + 8.84 0.000 Intergenic L1M4b|LINE|L1 -10291 NM_001243135 246330 Hs.656875 NM_145065 ENSG00000174516 PELI3 - pellino E3 ubiquitin protein ligase family member 3 protein-coding chr6-6031 chr6 119448922 119449132 + 8.84 0.000 Intergenic L3|LINE|CR1 42275 NR_046100 285762 Hs.571063 NR_046100 LOC285762 - uncharacterized LOC285762 ncRNA chr19-6917 chr19 45975958 45976168 + 8.84 0.000 Intergenic Intergenic -2198 NM_002516 4858 Hs.375439 NM_002516 ENSG00000104967 NOVA2 ANOVA|NOVA3 NOVA alternative splicing regulator 2 protein-coding chrX-1319 chrX 130775183 130775393 + 8.84 0.000 intron (NM_182314, intron 3 of 15) AluJo|SINE|Alu -27348 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr3-8049 chr3 2526890 2527100 + 8.84 0.000 intron (NM_175607, intron 3 of 24) MIR3|SINE|MIR 288166 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr1-8928 chr1 7549398 7549608 + 8.84 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -120227 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr3-4727 chr3 63463491 63463701 + 8.84 0.000 intron (NR_046677, intron 1 of 4) intron (NR_046677, intron 1 of 4) 20284 NM_144642 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr12-7545 chr12 70971503 70971713 + 8.84 0.000 Intergenic Intergenic -50870 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr13-1727 chr13 99064077 99064287 + 8.84 0.000 intron (NM_015296, intron 1 of 55) intron (NM_015296, intron 1 of 55) 22512 NM_001318849 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr15-2359 chr15 40112973 40113183 + 8.84 0.000 Intergenic Intergenic -4199 NM_001003940 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr9-3679 chr9 99170147 99170357 + 8.84 0.000 Intergenic Intergenic 51690 NR_024532 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2 alpha-1,3/1,6-mannosyltransferase protein-coding chr7-3147 chr7 67538636 67538846 + 8.84 0.000 Intergenic MSTA|LTR|ERVL-MaLR 202765 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr12-2941 chr12 92304768 92304978 + 8.84 0.000 Intergenic Intergenic -116658 NR_027932 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 ncRNA chr15-1930 chr15 89758766 89758976 + 8.84 0.000 Intergenic Intergenic -7562 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr1-7363 chr1 19670788 19670998 + 8.84 0.000 intron (NM_000871, intron 1 of 2) intron (NM_000871, intron 1 of 2) 6018 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr9-2072 chr9 38663204 38663414 + 8.84 0.000 Intergenic Intergenic 42221 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr7-4677 chr7 39322301 39322511 + 8.84 0.000 intron (NM_001370959, intron 4 of 9) intron (NM_001370959, intron 4 of 9) 6728 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chrX-4287 chrX 42354922 42355132 + 8.84 0.000 Intergenic Intergenic 423136 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr12-6145 chr12 3036186 3036396 + 8.84 0.000 intron (NM_201443, intron 8 of 10) intron (NM_201443, intron 8 of 10) -41064 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr16-5251 chr16 49043878 49044088 + 8.84 0.000 Intergenic L1MB7|LINE|L1 237855 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding chrX-3930 chrX 9735918 9736128 + 8.84 0.000 intron (NM_000273, intron 8 of 8) intron (NM_000273, intron 8 of 8) 29824 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chrX-1488 chrX 141640198 141640408 + 8.84 0.000 intron (NR_037183, intron 3 of 3) MER4A1|LTR|ERV1 14439 NM_001318917 645188 Hs.679802 NM_001318917 LOC645188 SPANX-L uncharacterized LOC645188 protein-coding chr2-10886 chr2 66264530 66264740 + 8.84 0.000 Intergenic Intergenic 93693 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr7-8462 chr7 48250771 48250981 + 8.84 0.000 intron (NM_152701, intron 15 of 61) intron (NM_152701, intron 15 of 61) 79418 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr5-8380 chr5 123461657 123461867 + 8.84 0.000 Intergenic Intergenic -38170 NM_001166226 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr14-1176 chr14 55557285 55557495 + 8.84 0.000 Intergenic MamRTE1|LINE|RTE-BovB 22702 NR_027123 100129075 Hs.633724 NR_027123 ENSG00000186615 KTN1-AS1 C14orf33|MYCLo-3 KTN1 antisense RNA 1 ncRNA chr1-4531 chr1 45250953 45251163 + 8.84 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -44453 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr1-6705 chr1 55022111 55022321 + 8.84 0.000 Intergenic G-rich|Low_complexity|Low_complexity -17260 NM_174936 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr7-4723 chr7 51473844 51474054 + 8.84 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -80693 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr13-3027 chr13 22481647 22481857 + 8.84 0.000 Intergenic MSTA|LTR|ERVL-MaLR 271467 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA chr19-5554 chr19 56102658 56102868 + 8.84 0.000 3' UTR (NM_001351682, exon 2 of 2) 3' UTR (NM_001351682, exon 2 of 2) 18532 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr12-3050 chr12 4855429 4855639 + 8.84 0.000 Intergenic Intergenic 46358 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding chr7-4641 chr7 30465825 30466035 + 8.84 0.000 intron (NM_006092, intron 1 of 13) intron (NM_006092, intron 1 of 13) 12854 NM_006092 10392 Hs.405153 NM_006092 ENSG00000106100 NOD1 CARD4|CLR7.1|NLRC1 nucleotide binding oligomerization domain containing 1 protein-coding chr22-3610 chr22 20427192 20427402 + 8.84 0.000 intron (NM_182895, intron 10 of 10) intron (NM_182895, intron 10 of 10) 10528 NM_182895 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chr5-3393 chr5 142287972 142288182 + 8.84 0.000 Intergenic Intergenic 30245 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr10-3274 chr10 128721639 128721849 + 8.84 0.000 Intergenic Intergenic -191089 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chrX-1707 chrX 18886666 18886876 + 8.84 0.000 Intergenic L2a|LINE|L2 -3525 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr7-7496 chr7 100764992 100765202 + 8.84 0.000 intron (NR_111919, intron 22 of 46) intron (NR_111919, intron 22 of 46) 31502 NM_173059 7455 Hs.307004 NM_003386 ENSG00000146839 ZAN - zonadhesin (gene/pseudogene) protein-coding chr1-16317 chr1 216897923 216898133 + 8.84 0.000 intron (NM_001243507, intron 2 of 7) MIRb|SINE|MIR 41645 NM_001243512 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr9-2701 chr9 85414794 85415004 + 8.84 0.000 Intergenic Intergenic 327130 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr14-5058 chr14 82633913 82634123 + 8.84 0.000 Intergenic MER11C|LTR|ERVK -8614 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr17-3796 chr17 39750329 39750539 + 8.84 0.000 Intergenic Intergenic 10467 NM_001242443 2886 Hs.86859 NM_005310 ENSG00000141738 GRB7 - growth factor receptor bound protein 7 protein-coding chr22-1855 chr22 38473281 38473491 + 8.84 0.000 intron (NM_016657, intron 1 of 3) AluJo|SINE|Alu 5290 NM_006855 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr22-1461 chr22 50206581 50206791 + 8.84 0.000 intron (NM_031454, intron 2 of 8) intron (NM_031454, intron 2 of 8) 5675 NM_031454 83642 Hs.365405 NM_031454 ENSG00000073169 SELENOO SELO selenoprotein O protein-coding chrX-819 chrX 94198169 94198379 + 8.84 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 524068 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr5-3201 chr5 80694782 80694992 + 8.84 0.000 intron (NM_002439, intron 8 of 23) L1MDa|LINE|L1 -39904 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr19-6548 chr19 18958462 18958672 + 8.84 0.000 Intergenic AluSx|SINE|Alu -17350 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr9-3301 chr9 78439365 78439575 + 8.84 0.000 Intergenic Intergenic 142345 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr9-7758 chr9 76455245 76455455 + 8.84 0.000 intron (NM_001097634, intron 1 of 2) MER92B|LTR|ERV1 -3802 NM_001097633 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr11-5679 chr11 131590612 131590822 + 8.84 0.000 intron (NM_001352003, intron 1 of 8) MIRb|SINE|MIR -49850 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr22-2946 chr22 48269033 48269243 + 8.84 0.000 Intergenic Intergenic -5226 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr2-10218 chr2 105650569 105650779 + 8.84 0.000 Intergenic Intergenic -40115 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chr1-8351 chr1 58000101 58000311 + 8.84 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 139625 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr10-6057 chr10 128212800 128213010 + 8.84 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -73045 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr1-9885 chr1 67813315 67813525 + 8.84 0.000 intron (NM_018841, intron 1 of 3) L4_C_Mam|LINE|RTE-X -18868 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12, DIRAS3 and WLS antisense RNA 1 ncRNA chr22-1560 chr22 38349231 38349441 + 8.84 0.000 intron (NR_002821, intron 4 of 4) intron (NR_002821, intron 4 of 4) -31252 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr8-6707 chr8 84784065 84784275 + 8.84 0.000 intron (NM_001354322, intron 3 of 6) intron (NM_001354322, intron 3 of 6) 78243 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr7-3717 chr7 64992554 64992764 + 8.84 0.000 exon (NM_001007253, exon 2 of 2) exon (NM_001007253, exon 2 of 2) -1623 NM_015852 51351 Hs.250693 NM_015852 ENSG00000152926 ZNF117 H-plk|HPF9 zinc finger protein 117 protein-coding chr10-8304 chr10 78069734 78069944 + 8.84 0.000 Intergenic Intergenic 35976 NM_001142285 6229 Hs.280130 NM_001026 ENSG00000138326 RPS24 DBA3|S24|eS24 ribosomal protein S24 protein-coding chr17-5133 chr17 7785638 7785848 + 8.84 0.000 intron (NM_020877, intron 39 of 85) L2b|LINE|L2 31423 NR_002778 118432 Hs.658086 NR_002778 ENSG00000240480 RPL29P2 RPL29_10_1510 ribosomal protein L29 pseudogene 2 pseudo chr20-2601 chr20 38706753 38706963 + 8.84 0.000 Intergenic Intergenic -17628 NM_080552 140679 Hs.179080 NM_080552 ENSG00000101438 SLC32A1 VGAT|VIAAT solute carrier family 32 member 1 protein-coding chr3-9079 chr3 27450730 27450940 + 8.84 0.000 intron (NM_001258380, intron 2 of 23) intron (NM_001258380, intron 2 of 23) 5943 NM_003615 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr20-964 chr20 38165233 38165443 + 8.84 0.000 promoter-TSS (NM_001323318) promoter-TSS (NM_001323318) -68 NM_001323318 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr9-8327 chr9 115058139 115058349 + 8.84 0.000 intron (NM_002160, intron 14 of 27) intron (NM_002160, intron 14 of 27) 59913 NM_002160 3371 Hs.143250 NM_002160 ENSG00000041982 TNC 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C tenascin C protein-coding chrX-4969 chrX 113929078 113929288 + 8.84 0.000 intron (NR_131204, intron 1 of 2) L1MA4|LINE|L1 9035 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr3-2432 chr3 13077543 13077753 + 8.84 0.000 Intergenic Intergenic -4219 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr11-4770 chr11 118974670 118974880 + 8.84 0.000 intron (NM_181721, intron 1 of 5) L2a|LINE|L2 3014 NM_181721 283150 Hs.116679 NM_181721 ENSG00000176302 FOXR1 DLNB13|FOXN5 forkhead box R1 protein-coding chr1-8655 chr1 205636932 205637142 + 8.84 0.000 Intergenic Intergenic -4165 NM_001973 2005 Hs.497520 NM_001973 ENSG00000158711 ELK4 SAP1 ETS transcription factor ELK4 protein-coding chr17-4184 chr17 13395521 13395731 + 8.84 0.000 Intergenic Intergenic -88866 NR_146885 105371541 NR_146885 ENSG00000234634 LINC02093 - long intergenic non-protein coding RNA 2093 ncRNA chr2-8541 chr2 132669239 132669449 + 8.84 0.000 intron (NM_001077427, intron 1 of 2) CpG 861 NM_001321235 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr7-3590 chr7 25231367 25231577 + 8.84 0.000 Intergenic LTR41C|LTR|ERVL -2986 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr18-1910 chr18 33103393 33103603 + 8.84 0.000 intron (NM_001308126, intron 20 of 23) intron (NM_001308126, intron 20 of 23) -330475 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr20-1273 chr20 45685750 45685960 + 8.84 0.000 intron (NM_172131, intron 2 of 2) intron (NM_172131, intron 2 of 2) -15616 NM_147197 259239 Hs.374924 NM_147197 ENSG00000180083 WFDC11 WAP11 WAP four-disulfide core domain 11 protein-coding chr7-8280 chr7 38740871 38741081 + 8.84 0.000 intron (NM_014396, intron 25 of 28) intron (NM_014396, intron 25 of 28) -53887 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chr3-2498 chr3 174330357 174330567 + 8.84 0.000 Intergenic LTR16B2|LTR|ERVL -409666 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr2-7017 chr2 149799404 149799614 + 8.84 0.000 intron (NR_145421, intron 3 of 4) intron (NR_145421, intron 3 of 4) 59682 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr13-1040 chr13 76854782 76854992 + 8.84 0.000 Intergenic Intergenic 31518 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr3-5400 chr3 158555268 158555478 + 8.84 0.000 intron (NR_104147, intron 3 of 4) MLT1G|LTR|ERVL-MaLR 15693 NR_104147 100996447 Hs.369810 NR_104147 ENSG00000243150 LOC100996447 - uncharacterized LOC100996447 ncRNA chr19-5161 chr19 4803801 4804011 + 8.84 0.000 Intergenic Intergenic 12172 NM_018708 55527 Hs.515082 NM_018708 ENSG00000141965 FEM1A EPRAP fem-1 homolog A protein-coding chr11-7131 chr11 125653233 125653443 + 8.84 0.000 intron (NM_001244846, intron 11 of 11) AluJo|SINE|Alu 26982 NM_001274 1111 Hs.24529 NM_001274 ENSG00000149554 CHEK1 CHK1 checkpoint kinase 1 protein-coding chr9-6169 chr9 78292298 78292508 + 8.84 0.000 Intergenic Intergenic -4722 NM_021154 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr10-3891 chr10 61130568 61130778 + 8.84 0.000 Intergenic Intergenic 114398 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr6-4347 chr6 18087578 18087788 + 8.84 0.000 Intergenic LTR78|LTR|ERV1 34994 NM_198586 378884 Hs.348351 NM_198586 ENSG00000187566 NHLRC1 EPM2A|EPM2B|MALIN|bA204B7.2 NHL repeat containing E3 ubiquitin protein ligase 1 protein-coding chr11-2263 chr11 121655691 121655901 + 8.84 0.000 Intergenic Intergenic 203482 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr13-2585 chr13 72569351 72569561 + 8.84 0.000 Intergenic Intergenic 158173 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr8-5007 chr8 144268478 144268688 + 8.84 0.000 TTS (NM_001080514) TTS (NM_001080514) 2130 NM_001080514 642658 Hs.553250 NM_001008271 ENSG00000260428 SCX SCXA|SCXB|bHLHa48 scleraxis bHLH transcription factor protein-coding chr18-2581 chr18 11507009 11507219 + 8.84 0.000 TTS (NR_110779) TTS (NR_110779) 17066 NR_110778 101927433 Hs.331210 NR_110778 ENSG00000267252 LINC01255 - long intergenic non-protein coding RNA 1255 ncRNA chr1-7061 chr1 181245144 181245354 + 8.84 0.000 Intergenic Intergenic 8861 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr1-15467 chr1 154681402 154681612 + 8.84 0.000 Intergenic AluJb|SINE|Alu -53510 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr12-3052 chr12 5094718 5094928 + 8.84 0.000 Intergenic Intergenic 50944 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr16-3619 chr16 84758555 84758765 + 8.84 0.000 intron (NR_073578, intron 3 of 10) intron (NR_073578, intron 3 of 10) 58660 NR_073577 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr9-3478 chr9 12774900 12775110 + 8.84 0.000 promoter-TSS (NM_203403) promoter-TSS (NM_203403) -15 NM_203403 286343 Hs.445356 NM_203403 ENSG00000153714 LURAP1L C9orf150|HYST0841|LRAP35b|bA3L8.2 leucine rich adaptor protein 1 like protein-coding chr22-2249 chr22 28855295 28855505 + 8.84 0.000 Intergenic Intergenic -28172 NM_001206998 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr16-5752 chr16 86306033 86306243 + 8.84 0.000 Intergenic Intergenic 19707 NR_038438 146513 Hs.434338 NR_038438 ENSG00000268532 LINC02135 - long intergenic non-protein coding RNA 2135 ncRNA chr15-2803 chr15 37597488 37597698 + 8.84 0.000 Intergenic L3b|LINE|CR1 -337014 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr14-2004 chr14 54902218 54902428 + 8.84 0.000 exon (NM_001024070, exon 1 of 7) exon (NM_001024070, exon 1 of 7) 501 NM_001024024 2643 Hs.86724 NM_000161 ENSG00000131979 GCH1 DYT14|DYT5|DYT5a|GCH|GTP-CH-1|GTPCH1|HPABH4B GTP cyclohydrolase 1 protein-coding chr10-3642 chr10 98295558 98295768 + 8.84 0.000 Intergenic LTR50|LTR|ERVL -27469 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr14-4678 chr14 56272016 56272226 + 8.84 0.000 intron (NM_021255, intron 2 of 5) intron (NM_021255, intron 2 of 5) 153710 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr22-2327 chr22 39762386 39762596 + 8.84 0.000 intron (NM_152512, intron 6 of 6) AluJb|SINE|Alu 131269 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr13-1759 chr13 111416957 111417167 + 8.84 0.000 Intergenic MER115|DNA|hAT-Tip100 96420 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr17-1752 chr17 9714571 9714781 + 8.84 0.000 intron (NM_001267576, intron 14 of 14) AluSx3|SINE|Alu 69139 NM_001267576 124739 Hs.709621 NM_153210 ENSG00000154914 USP43 - ubiquitin specific peptidase 43 protein-coding chr3-8220 chr3 47296501 47296711 + 8.84 0.000 intron (NM_025010, intron 1 of 9) L2c|LINE|L2 13662 NM_025010 23276 Hs.517946 NM_025010 ENSG00000114648 KLHL18 - kelch like family member 18 protein-coding chr6-2830 chr6 161618734 161618944 + 8.84 0.000 intron (NM_004562, intron 7 of 11) intron (NM_004562, intron 7 of 11) 147862 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr2-6340 chr2 84716509 84716719 + 8.84 0.000 intron (NM_001370, intron 58 of 76) intron (NM_001370, intron 58 of 76) 164470 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr1-7728 chr1 29341105 29341315 + 8.84 0.000 intron (NR_110758, intron 1 of 2) AluSx|SINE|Alu 8904 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr11-5623 chr11 118691040 118691250 + 8.84 0.000 Intergenic L2a|LINE|L2 -11495 NM_007180 11181 Hs.129712 NM_007180 ENSG00000118094 TREH TRE|TREA|TREHD trehalase protein-coding chr4-6824 chr4 8113222 8113432 + 8.84 0.000 intron (NM_001130084, intron 1 of 19) AluJb|SINE|Alu -41339 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr8-3358 chr8 46237701 46237911 + 8.84 0.000 Intergenic GSAT|Satellite|centr 379837 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr1-6245 chr1 228010828 228011038 + 8.84 0.000 intron (NM_033131, intron 1 of 3) intron (NM_033131, intron 1 of 3) 3935 NM_033131 89780 Hs.336930 NM_033131 ENSG00000154342 WNT3A - Wnt family member 3A protein-coding chr6-5893 chr6 43621612 43621822 + 8.84 0.000 exon (NM_001286216, exon 12 of 12) exon (NM_001286216, exon 12 of 12) 5636 NM_001286216 54676 Hs.485449 NM_019096 ENSG00000172432 GTPBP2 JABELS GTP binding protein 2 protein-coding chr2-3067 chr2 101520592 101520802 + 8.84 0.000 Intergenic Intergenic -45585 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr6-4750 chr6 70125059 70125269 + 8.84 0.000 intron (NM_001858, intron 17 of 50) intron (NM_001858, intron 17 of 50) 158033 NM_078485 1297 Hs.590892 NM_001851 ENSG00000112280 COL9A1 DJ149L1.1.2|EDM6|MED|STL4 collagen type IX alpha 1 chain protein-coding chr2-14553 chr2 230872450 230872660 + 8.84 0.000 intron (NM_001012514, intron 1 of 4) intron (NM_001012514, intron 1 of 4) 7605 NM_001012516 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr6-7381 chr6 49640519 49640729 + 8.84 0.000 Intergenic Intergenic -3750 NM_000324 6005 Hs.120950 NM_000324 ENSG00000112077 RHAG CD241|OHS|OHST|RH2|RH50A|RHNR|Rh50|Rh50GP|SLC42A1 Rh associated glycoprotein protein-coding chr9-4335 chr9 128110888 128111098 + 8.84 0.000 TTS (NR_033374) TTS (NR_033374) 7741 NR_033374 100289019 Hs.693796 NR_033374 SLC25A25-AS1 - SLC25A25 antisense RNA 1 ncRNA chr3-4906 chr3 186783844 186784054 + 8.84 0.000 promoter-TSS (NR_002587) promoter-TSS (NR_002587) 372 NM_001967 1974 Hs.518475 NM_001967 ENSG00000156976 EIF4A2 BM-010|DDX2B|EIF4A|EIF4F|eIF-4A-II|eIF4A-II eukaryotic translation initiation factor 4A2 protein-coding chr18-1973 chr18 38735060 38735270 + 8.84 0.000 Intergenic Intergenic 887010 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr6-3185 chr6 128723768 128723978 + 8.84 0.000 Intergenic Intergenic -159265 NM_001079823 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr4-7838 chr4 101599691 101599901 + 8.84 0.000 Intergenic Intergenic -190811 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr6-4836 chr6 83822112 83822322 + 8.84 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -31049 NM_001009994 134701 Hs.149454 NM_001009994 ENSG00000203877 RIPPLY2 C6orf159|SCDO6|dJ237I15.1 ripply transcriptional repressor 2 protein-coding chr8-2985 chr8 97804864 97805074 + 8.84 0.000 intron (NM_018407, intron 1 of 6) intron (NM_018407, intron 1 of 6) 29181 NM_018407 55353 Hs.492314 NM_018407 ENSG00000104341 LAPTM4B LAPTM4beta|LC27 lysosomal protein transmembrane 4 beta protein-coding chr13-4294 chr13 99045535 99045745 + 8.84 0.000 intron (NM_015296, intron 1 of 55) L1MA8|LINE|L1 -29855 NM_001366677 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr1-7441 chr1 51214640 51214850 + 8.84 0.000 intron (NR_147076, intron 1 of 1) LTR49-int|LTR|ERV1 20351 NR_147076 105378716 NR_147076 ENSG00000203356 LINC01562 - long intergenic non-protein coding RNA 1562 ncRNA chr2-12364 chr2 51674512 51674722 + 8.84 0.000 intron (NR_135237, intron 5 of 10) intron (NR_135237, intron 5 of 10) 642016 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr4-3052 chr4 140635668 140635878 + 8.84 0.000 intron (NM_015130, intron 15 of 20) Tigger20a|DNA|TcMar-Tigger 7307 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr11-7928 chr11 2245530 2245740 + 8.84 0.000 Intergenic L1ME1|LINE|L1 25317 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr16-3188 chr16 84319313 84319523 + 8.84 0.000 intron (NM_001282467, intron 3 of 6) intron (NM_001282467, intron 3 of 6) 24540 NM_001282467 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr3-10707 chr3 152785403 152785613 + 8.84 0.000 Intergenic Intergenic -49623 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr11-9609 chr11 65629836 65630046 + 8.84 0.000 intron (NM_032223, intron 26 of 34) intron (NM_032223, intron 26 of 34) -6369 NR_039839 100616292 NR_039839 ENSG00000266041 MIR4690 - microRNA 4690 ncRNA chr16-4555 chr16 66379031 66379241 + 8.84 0.000 intron (NM_001795, intron 1 of 11) LTR22A|LTR|ERVK 12445 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr12-3865 chr12 109670902 109671112 + 8.84 0.000 Intergenic Intergenic -42818 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr1-14988 chr1 90546575 90546785 + 8.84 0.000 Intergenic L2c|LINE|L2 -111070 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr2-13574 chr2 156210589 156210799 + 8.84 0.000 intron (NR_110250, intron 1 of 3) L1PREC2|LINE|L1 44237 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr12-6426 chr12 81451173 81451383 + 8.84 0.000 intron (NM_001282536, intron 2 of 29) intron (NM_001282536, intron 2 of 29) 61113 NM_001282536 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr3-5785 chr3 25469681 25469891 + 8.84 0.000 intron (NR_110892, intron 2 of 6) L2a|LINE|L2 11476 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr22-1891 chr22 44837461 44837671 + 8.84 0.000 intron (NM_181335, intron 7 of 11) intron (NM_181335, intron 7 of 11) 85008 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr8-5207 chr8 113147566 113147776 + 8.84 0.000 intron (NM_001363185, intron 4 of 66) intron (NM_001363185, intron 4 of 66) 229481 NM_198124 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr1-5028 chr1 82069307 82069517 + 8.84 0.000 Intergenic HERVH-int|LTR|ERV1 266959 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr3-9870 chr3 81195510 81195720 + 8.84 0.000 Intergenic LTR26|LTR|ERV1 201747 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr9-2704 chr9 86722891 86723101 + 8.84 0.000 Intergenic Intergenic 224510 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr7-2542 chr7 76087554 76087764 + 8.84 0.000 Intergenic L1ME4c|LINE|L1 21103 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr16-6803 chr16 79559113 79559323 + 8.84 0.000 Intergenic Intergenic 41519 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr11-6123 chr11 38788518 38788728 + 8.84 0.000 Intergenic Intergenic 139765 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr12-2820 chr12 119895148 119895358 + 8.84 0.000 Intergenic L1MA9|LINE|L1 -17933 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr2-9904 chr2 231190989 231191199 + 8.84 0.000 Intergenic Intergenic -7537 NM_001271466 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr5-2814 chr5 23696976 23697186 + 8.84 0.000 Intergenic LTR22E|LTR|ERVK 189426 NM_001310214 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding chr5-2732 chr5 132386731 132386941 + 8.84 0.000 intron (NM_003060, intron 4 of 9) intron (NM_003060, intron 4 of 9) -16920 NR_110997 553103 Hs.570908 NR_110997 ENSG00000233006 MIR3936HG SLC22A5-AS1 MIR3936 host gene ncRNA chr15-2305 chr15 72918650 72918860 + 8.84 0.000 Intergenic LTR16C|LTR|ERVL -133708 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr11-8010 chr11 13831912 13832122 + 8.84 0.000 intron (NR_149108, intron 3 of 3) MLT1G|LTR|ERVL-MaLR 38599 NR_149109 105376561 Hs.512244 NR_149109 ENSG00000254930 LINC02545 - long intergenic non-protein coding RNA 2545 ncRNA chr10-5543 chr10 86532174 86532384 + 8.84 0.000 Intergenic AluSz|SINE|Alu -10487 NM_015045 23063 Hs.203099 NM_015045 ENSG00000062650 WAPL FOE|KIAA0261|WAPAL WAPL cohesin release factor protein-coding chr18-1275 chr18 58611994 58612204 + 8.84 0.000 intron (NM_052947, intron 1 of 12) MER20|DNA|hAT-Charlie 11479 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chrX-3341 chrX 132379416 132379626 + 8.84 0.000 3' UTR (NM_018388, exon 8 of 8) 3' UTR (NM_018388, exon 8 of 8) 34054 NM_001170702 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr5-3234 chr5 94309047 94309257 + 8.84 0.000 intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) -197453 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr10-5306 chr10 70396253 70396463 + 8.84 0.000 Intergenic Intergenic -7787 NM_004096 1979 Hs.621200 NM_004096 ENSG00000148730 EIF4EBP2 4EBP2|PHASII eukaryotic translation initiation factor 4E binding protein 2 protein-coding chr16-3090 chr16 67198277 67198487 + 8.84 0.000 promoter-TSS (NM_024712) promoter-TSS (NM_024712) -749 NM_024712 79767 Hs.377416 NM_024712 ENSG00000102890 ELMO3 CED-12|CED12|ELMO-3 engulfment and cell motility 3 protein-coding chr9-8232 chr9 110066226 110066436 + 8.84 0.000 intron (NM_001004065, intron 1 of 3) MIRb|SINE|MIR 17733 NM_001004065 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr1-3602 chr1 25107721 25107931 + 8.84 0.000 Intergenic Intergenic 84323 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr2-5871 chr2 240003831 240004041 + 8.84 0.000 intron (NR_136157, intron 6 of 7) intron (NR_136157, intron 6 of 7) 21406 NM_004544 4705 Hs.277677 NM_004544 ENSG00000130414 NDUFA10 CI-42KD|CI-42k|MC1DN22 NADH:ubiquinone oxidoreductase subunit A10 protein-coding chr19-5854 chr19 44003642 44003852 + 8.84 0.000 promoter-TSS (NR_110727) promoter-TSS (NR_110727) 790 NM_006300 7773 Hs.193583 NM_006300 ENSG00000159882 ZNF230 FDZF2 zinc finger protein 230 protein-coding chr5-3601 chr5 109619464 109619674 + 8.84 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -69797 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr2-5445 chr2 121597806 121598016 + 8.84 0.000 intron (NM_015282, intron 2 of 38) intron (NM_015282, intron 2 of 38) 51551 NM_001142274 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding chr6-6613 chr6 148760355 148760565 + 8.84 0.000 intron (NM_005715, intron 1 of 7) L3|LINE|CR1 13430 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr1-15319 chr1 119285364 119285574 + 8.84 0.000 Intergenic LTR26|LTR|ERV1 -42783 NR_146623 105378934 NR_146623 ENSG00000232650 LINC01780 - long intergenic non-protein coding RNA 1780 ncRNA chr14-4128 chr14 72936703 72936913 + 8.84 0.000 intron (NM_001352449, intron 2 of 14) L2c|LINE|L2 10344 NM_015604 26094 Hs.331491 NM_015604 ENSG00000119599 DCAF4 WDR21|WDR21A DDB1 and CUL4 associated factor 4 protein-coding chrX-1409 chrX 19344793 19345003 + 8.84 0.000 intron (NM_000284, intron 1 of 10) intron (NM_000284, intron 1 of 10) 971 NM_000284 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr11-6930 chr11 110629663 110629873 + 8.84 0.000 intron (NM_020809, intron 4 of 15) MLT1F2|LTR|ERVL-MaLR 82057 NM_001258415 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr1-6876 chr1 115469954 115470164 + 8.84 0.000 Intergenic L2a|LINE|L2 -131823 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr19-2765 chr19 42045932 42046142 + 8.84 0.000 intron (NM_002088, intron 10 of 18) intron (NM_002088, intron 10 of 18) 19768 NM_002088 2901 Hs.367799 NM_002088 ENSG00000105737 GRIK5 EAA2|GRIK2|GluK5|KA2 glutamate ionotropic receptor kainate type subunit 5 protein-coding chr11-8572 chr11 386474 386684 + 8.84 0.000 Intergenic MER52D|LTR|ERV1 -6017 NM_001303029 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr2-4832 chr2 68191063 68191273 + 8.84 0.000 intron (NM_000945, intron 2 of 5) Tigger3c|DNA|TcMar-Tigger 33280 NM_020143 56902 Hs.262858 NM_020143 ENSG00000115946 PNO1 KHRBP1|RRP20 partner of NOB1 homolog protein-coding chr1-6855 chr1 109309831 109310041 + 8.84 0.000 3' UTR (NM_002959, exon 20 of 20) 3' UTR (NM_002959, exon 20 of 20) -2925 NM_001010985 343263 Hs.443402 NM_001010985 ENSG00000221986 MYBPHL - myosin binding protein H like protein-coding chr20-2656 chr20 44411216 44411426 + 8.84 0.000 intron (NM_001287183, intron 4 of 10) intron (NM_001287183, intron 4 of 10) 3201 NR_037419 100500813 NR_037419 ENSG00000266151 MIR3646 - microRNA 3646 ncRNA chr10-4681 chr10 132269842 132270052 + 8.84 0.000 intron (NM_001318878, intron 1 of 11) intron (NM_001318878, intron 1 of 11) -20839 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr15-3575 chr15 43302204 43302414 + 8.84 0.000 promoter-TSS (NM_052955) promoter-TSS (NM_052955) -54 NM_052955 116179 Hs.164661 NM_052955 ENSG00000159495 TGM7 TGMZ transglutaminase 7 protein-coding chr1-5573 chr1 1421506 1421716 + 8.84 0.000 promoter-TSS (NM_001243535) promoter-TSS (NM_001243535) -167 NM_001145210 441869 Hs.381222 NM_001145210 ENSG00000235098 ANKRD65 - ankyrin repeat domain 65 protein-coding chr15-1103 chr15 74100105 74100315 + 8.84 0.000 promoter-TSS (NR_160652) promoter-TSS (NR_160652) -4 NR_160652 732265 NR_160652 LOC732265 - COMM domain containing 4 pseudogene pseudo chr8-4037 chr8 60861505 60861715 + 8.84 0.000 intron (NM_017780, intron 35 of 37) L3|LINE|CR1 106138 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr12-7354 chr12 56241643 56241853 + 8.84 0.000 3' UTR (NM_173595, exon 28 of 28) 3' UTR (NM_173595, exon 28 of 28) 11031 NM_001135195 283375 Hs.591018 NM_173596 ENSG00000139540 SLC39A5 LZT-Hs7|MYP24|ZIP5 solute carrier family 39 member 5 protein-coding chr5-9101 chr5 172920012 172920222 + 8.84 0.000 intron (NM_001031711, intron 5 of 9) intron (NM_001031711, intron 5 of 9) 5034 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr2-6618 chr2 238529162 238529372 + 8.84 0.000 intron (NR_037809, intron 2 of 2) intron (NR_037809, intron 2 of 2) 26232 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr1-5157 chr1 162004125 162004335 + 8.84 0.000 intron (NM_001347700, intron 4 of 7) intron (NM_001347700, intron 4 of 7) 20235 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr8-6367 chr8 53254320 53254530 + 8.84 0.000 Intergenic L2c|LINE|L2 -2728 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr21-1728 chr21 33321139 33321349 + 8.84 0.000 Intergenic AluSz|SINE|Alu -3726 NM_000629 3454 Hs.529400 NM_000629 ENSG00000142166 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon alpha and beta receptor subunit 1 protein-coding chr17-6131 chr17 81381833 81382043 + 8.84 0.000 intron (NM_001272086, intron 1 of 3) intron (NM_001272086, intron 1 of 3) 3187 NM_001347841 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr11-2106 chr11 122720446 122720656 + 8.84 0.000 intron (NM_001363365, intron 1 of 13) L2a|LINE|L2 64829 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr20-974 chr20 45799251 45799461 + 8.84 0.000 intron (NM_052951, intron 4 of 12) L2|LINE|L2 7402 NM_052951 116092 Hs.472852 NM_052951 ENSG00000101457 DNTTIP1 C20orf167|Tdif1|dJ447F3.4 deoxynucleotidyltransferase terminal interacting protein 1 protein-coding chr1-5864 chr1 1948448 1948658 + 8.84 0.000 intron (NM_001304360, intron 18 of 38) AluJr|SINE|Alu -29274 NM_178545 339456 Hs.123423 NM_178545 ENSG00000178821 TMEM52 - transmembrane protein 52 protein-coding chr2-11175 chr2 150663415 150663625 + 8.84 0.000 Intergenic Intergenic 34623 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr7-3715 chr7 64314882 64315092 + 8.84 0.000 intron (NM_001294255, intron 1 of 2) MSTA|LTR|ERVL-MaLR 1026 NM_001170905 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding chr10-5814 chr10 109962518 109962728 + 8.84 0.000 intron (NR_038943, intron 2 of 4) MIRb|SINE|MIR -33750 NM_001320591 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr6-2366 chr6 135812001 135812211 + 8.84 0.000 Intergenic Intergenic -39595 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr7-7253 chr7 28854172 28854382 + 8.84 0.000 Intergenic CpG 104053 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr3-1355 chr3 188154065 188154275 + 8.84 0.000 promoter-TSS (NR_036497) promoter-TSS (NR_036497) -82 NR_036497 339929 Hs.596639 NR_036497 ENSG00000270959 LPP-AS2 MYCLo-5|MYCLo-6 LPP antisense RNA 2 ncRNA chr5-6286 chr5 110160848 110161058 + 8.84 0.000 Intergenic Intergenic 277771 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr7-7531 chr7 107049172 107049382 + 8.84 0.000 intron (NM_002736, intron 1 of 10) intron (NM_002736, intron 1 of 10) 4572 NM_002736 5577 Hs.433068 NM_002736 ENSG00000005249 PRKAR2B PRKAR2|RII-BETA protein kinase cAMP-dependent type II regulatory subunit beta protein-coding chr5-6456 chr5 169594912 169595122 + 8.84 0.000 intron (NM_001329641, intron 7 of 11) intron (NM_001329641, intron 7 of 11) 10937 NM_001329640 54908 Hs.368710 NM_017785 ENSG00000040275 SPDL1 CCDC99 spindle apparatus coiled-coil protein 1 protein-coding chr7-7100 chr7 601702 601912 + 8.84 0.000 intron (NM_001164760, intron 6 of 10) intron (NM_001164760, intron 6 of 10) -1038 NR_110054 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr3-5493 chr3 193579808 193580018 + 8.84 0.000 Intergenic Intergenic -13231 NM_130833 4976 Hs.594504 NM_015560 ENSG00000198836 OPA1 BERHS|MGM1|MTDPS14|NPG|NTG|largeG OPA1 mitochondrial dynamin like GTPase protein-coding chr4-7674 chr4 87109119 87109329 + 8.84 0.000 intron (NM_005935, intron 10 of 19) intron (NM_005935, intron 10 of 19) 102223 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr2-14143 chr2 203402999 203403209 + 8.84 0.000 intron (NM_001282926, intron 8 of 9) intron (NM_001282926, intron 8 of 9) 36220 NM_001282927 10152 Hs.471156 NM_005759 ENSG00000138443 ABI2 ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB abl interactor 2 protein-coding chr1-7122 chr1 202178958 202179168 + 8.84 0.000 intron (NR_002930, intron 8 of 21) intron (NR_002930, intron 8 of 21) 11012 NR_002930 148713 Hs.523870 NR_002930 ENSG00000243323 PTPRVP ESP|OST-PTP|PTPRV protein tyrosine phosphatase receptor type V, pseudogene pseudo chr5-4490 chr5 10033902 10034112 + 8.84 0.000 Intergenic Intergenic -130183 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr4-6113 chr4 17674615 17674825 + 8.84 0.000 intron (NM_015688, intron 7 of 17) Tigger1|DNA|TcMar-Tigger 60079 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chr7-2717 chr7 32142644 32142854 + 8.84 0.000 intron (NM_001322059, intron 3 of 17) MLT1J2|LTR|ERVL-MaLR -71313 NM_001322057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr7-4671 chr7 38373294 38373504 + 8.84 0.000 intron (NR_040085, intron 3 of 3) intron (NR_040085, intron 3 of 3) 31822 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr1-5333 chr1 227953532 227953742 + 8.84 0.000 Intergenic Intergenic -5705 NM_003395 7483 Hs.149504 NM_003395 ENSG00000143816 WNT9A WNT14 Wnt family member 9A protein-coding chr12-3079 chr12 11652625 11652835 + 8.84 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 2876 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr6-7435 chr6 54096658 54096868 + 8.84 0.000 intron (NM_001281746, intron 1 of 11) LTR16A|LTR|ERVL -14680 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr7-5700 chr7 69871384 69871594 + 8.84 0.000 intron (NM_015570, intron 1 of 18) MER44B|DNA|TcMar-Tigger 273014 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr10-5159 chr10 55829516 55829726 + 8.84 0.000 Intergenic AluSq2|SINE|Alu -201679 NM_001354404 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding chr19-4960 chr19 45228200 45228410 + 8.84 0.000 intron (NM_138568, intron 2 of 9) intron (NM_138568, intron 2 of 9) 5906 NM_138568 90332 Hs.337557 NM_138568 ENSG00000283632 EXOC3L2 XTP7 exocyst complex component 3 like 2 protein-coding chr14-2313 chr14 76904800 76905010 + 8.84 0.000 Intergenic Intergenic -54733 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr1-6370 chr1 8918068 8918278 + 8.84 0.000 Intergenic AluSx|SINE|Alu -27695 NM_001270502 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr11-10446 chr11 117087419 117087629 + 8.84 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 10904 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr7-7083 chr7 152761394 152761604 + 8.84 0.000 intron (NM_001350942, intron 1 of 11) intron (NM_001350942, intron 1 of 11) 1747 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chrX-2439 chrX 79755598 79755808 + 8.84 0.000 Intergenic Intergenic -259050 NM_001109879 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr2-9473 chr2 235445360 235445570 + 8.84 0.000 Intergenic Intergenic -48578 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr10-2735 chr10 113645054 113645264 + 8.84 0.000 intron (NM_001322945, intron 11 of 40) intron (NM_001322945, intron 11 of 40) 18882 NM_198060 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr14-2238 chr14 104992713 104992923 + 8.84 0.000 intron (NM_001364170, intron 3 of 4) intron (NM_001364170, intron 3 of 4) 6539 NM_001364170 122616 Hs.27183 NM_174891 ENSG00000140104 CLBA1 C14orf79 clathrin binding box of aftiphilin containing 1 protein-coding chr7-8790 chr7 82050985 82051195 + 8.84 0.000 intron (NM_001302890, intron 10 of 10) intron (NM_001302890, intron 10 of 10) 41913 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr5-5935 chr5 74089989 74090199 + 8.84 0.000 Intergenic Intergenic 218231 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr1-13119 chr1 195739564 195739774 + 8.84 0.000 Intergenic Intergenic 349046 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr11-4758 chr11 114083478 114083688 + 8.84 0.000 intron (NM_006006, intron 2 of 6) intron (NM_006006, intron 2 of 6) 20372 NM_001354752 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr1-8521 chr1 155342009 155342219 + 8.84 0.000 intron (NM_018489, intron 24 of 27) intron (NM_018489, intron 24 of 27) 4331 NR_030282 693140 NR_030282 ENSG00000283701 MIR555 MIRN555|hsa-mir-555 microRNA 555 ncRNA chr12-3194 chr12 52822703 52822913 + 8.84 0.000 intron (NM_175834, intron 7 of 8) intron (NM_175834, intron 7 of 8) -8692 NM_002272 3851 Hs.654610 NM_002272 ENSG00000170477 KRT4 CK-4|CK4|CYK4|K4|WSN1 keratin 4 protein-coding chr22-2490 chr22 22038061 22038271 + 8.84 0.000 intron (NR_135291, intron 1 of 6) intron (NR_135291, intron 1 of 6) 5768 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr1-6956 chr1 156675601 156675811 + 8.84 0.000 intron (NM_006617, intron 1 of 3) intron (NM_006617, intron 1 of 3) 1701 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr5-7330 chr5 16452281 16452491 + 8.84 0.000 intron (NM_033414, intron 5 of 5) intron (NM_033414, intron 5 of 5) -11284 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA chr7-3027 chr7 90157552 90157762 + 8.84 0.000 intron (NM_012449, intron 1 of 4) MLT1K|LTR|ERVL-MaLR 3188 NM_012449 26872 Hs.61635 NM_012449 ENSG00000164647 STEAP1 PRSS24|STEAP STEAP family member 1 protein-coding chr7-2767 chr7 56281315 56281525 + 8.84 0.000 Intergenic L1MD2|LINE|L1 -165003 NM_001145712 389493 Hs.177948 NM_001145712 ENSG00000185290 NUPR2 NUPR1L nuclear protein 2, transcriptional regulator protein-coding chr11-6580 chr11 72294462 72294672 + 8.84 0.000 intron (NM_030813, intron 14 of 16) intron (NM_030813, intron 14 of 16) -50391 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr17-4424 chr17 41455236 41455446 + 8.84 0.000 Intergenic Intergenic 12045 NM_002278 3882 Hs.41752 NM_002278 ENSG00000108759 KRT32 HA2|HKA2|KRTHA2|hHa2 keratin 32 protein-coding chr4-3594 chr4 3976792 3977002 + 8.84 0.000 Intergenic MIRb|SINE|MIR -21469 NR_130740 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr11-10072 chr11 84984025 84984235 + 8.84 0.000 intron (NM_001351274, intron 5 of 26) L1PB1|LINE|L1 -60709 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr2-8955 chr2 189024679 189024889 + 8.84 0.000 Intergenic L2|LINE|L2 29154 NR_037401 100500837 NR_037401 ENSG00000284180 MIR3606 mir-3606 microRNA 3606 ncRNA chr7-9626 chr7 150406260 150406470 + 8.84 0.000 intron (NR_027237, intron 1 of 2) intron (NR_027237, intron 1 of 2) 613 NR_027237 728743 Hs.650365 NM_001080852 LOC728743 - zinc finger protein pseudogene pseudo chr6-1717 chr6 34060714 34060924 + 8.84 0.000 intron (NM_000841, intron 4 of 10) intron (NM_000841, intron 4 of 10) 45148 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr11-6709 chr11 79296461 79296671 + 8.84 0.000 intron (NM_001098816, intron 2 of 33) intron (NM_001098816, intron 2 of 33) 105543 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr8-6830 chr8 97698331 97698541 + 8.84 0.000 intron (NM_001363137, intron 7 of 12) Charlie4z|DNA|hAT-Charlie 54252 NM_001363136 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr1-9040 chr1 12205138 12205348 + 8.84 0.000 intron (NM_001066, intron 9 of 9) L2b|LINE|L2 13530 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr14-4557 chr14 45137742 45137952 + 8.84 0.000 intron (NM_001308133, intron 2 of 21) intron (NM_001308133, intron 2 of 21) 1908 NM_001308134 57697 Hs.509229 NM_020937 ENSG00000187790 FANCM FAAP250|KIAA1596|POF15|SPGF28 FA complementation group M protein-coding chr4-7040 chr4 27437503 27437713 + 8.84 0.000 Intergenic Intergenic 220129 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr2-8205 chr2 94967457 94967667 + 8.84 0.000 Intergenic L1M4b|LINE|L1 -20220 NR_037597 442028 Hs.611545 NR_037597 ENSG00000259848 LOC442028 - uncharacterized LOC442028 ncRNA chr10-9254 chr10 133512246 133512456 + 8.84 0.000 Intergenic Intergenic -15012 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr21-552 chr21 42940172 42940382 + 8.84 0.000 Intergenic Intergenic 10737 NR_049889 100847013 NR_049889 ENSG00000264580 MIR5692B - microRNA 5692b ncRNA chr2-9530 chr2 238613740 238613950 + 8.84 0.000 Intergenic Intergenic -58346 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr3-2692 chr3 52812457 52812667 + 8.84 0.000 TTS (NM_001166449) TTS (NM_001166449) -11373 NR_046615 100873993 Hs.602700 NR_046615 ENSG00000239799 ITIH4-AS1 - ITIH4 antisense RNA 1 ncRNA chr9-5065 chr9 33407644 33407854 + 8.84 0.000 Intergenic Intergenic -5067 NR_134513 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr10-8780 chr10 105284248 105284458 + 8.84 0.000 Intergenic Intergenic 535980 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr1-9842 chr1 63343343 63343553 + 8.84 0.000 Intergenic AluSz|SINE|Alu -16464 NR_106716 102464823 NR_106716 ENSG00000275836 MIR6068 hsa-mir-6068 microRNA 6068 ncRNA chr1-15798 chr1 176741842 176742052 + 8.84 0.000 intron (NM_020318, intron 14 of 22) L2b|LINE|L2 278772 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr1-14743 chr1 67283509 67283719 + 8.84 0.000 Intergenic MER34D|LTR|ERV1 -23750 NM_001258216 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr14-2385 chr14 45358750 45358960 + 8.84 0.000 Intergenic MER39|LTR|ERV1 -105653 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding chr3-7272 chr3 197111858 197112068 + 8.84 0.000 intron (NM_001366216, intron 12 of 23) L1ME2|LINE|L1 71909 NR_158767 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr10-6421 chr10 17062663 17062873 + 8.84 0.000 intron (NM_001081, intron 22 of 66) intron (NM_001081, intron 22 of 66) 67049 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr6-2647 chr6 169145364 169145574 + 8.84 0.000 Intergenic Intergenic 16832 NR_132622 101929484 Hs.364166 NR_132622 ENSG00000223485 LINC01615 - long intergenic non-protein coding RNA 1615 ncRNA chrX-604 chrX 136401751 136401961 + 8.84 0.000 intron (NM_153834, intron 21 of 25) LTR75|LTR|ERVL -86091 NM_001727 680 Hs.121484 NM_001727 ENSG00000102239 BRS3 BB3|BB3R|BBR3 bombesin receptor subtype 3 protein-coding chr18-3003 chr18 24745168 24745378 + 8.84 0.000 intron (NR_134604, intron 2 of 2) intron (NR_134604, intron 2 of 2) 19492 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chr1-3447 chr1 25799919 25800129 + 8.84 0.000 promoter-TSS (NM_206926) promoter-TSS (NM_206926) -169 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr15-1374 chr15 89217722 89217932 + 8.84 0.000 intron (NM_000326, intron 4 of 8) intron (NM_000326, intron 4 of 8) 3752 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chr8-3566 chr8 129477450 129477660 + 8.84 0.000 intron (NR_130920, intron 1 of 3) intron (NR_130920, intron 1 of 3) 6587 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA chr17-2845 chr17 20281346 20281556 + 8.84 0.000 intron (NM_001033553, intron 12 of 14) intron (NM_001033553, intron 12 of 14) -39723 NR_023380 348254 Hs.462475 NR_023380 CCDC144CP CCDC144C coiled-coil domain containing 144C, pseudogene pseudo chr12-1851 chr12 46524914 46525124 + 8.84 0.000 intron (NR_125380, intron 3 of 3) intron (NR_125380, intron 3 of 3) 140912 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr20-2595 chr20 38585118 38585328 + 8.84 0.000 intron (NR_130907, intron 1 of 2) intron (NR_130907, intron 1 of 2) 4026 NM_001018082 149685 Hs.368028 NM_174906 ENSG00000182035 ADIG SMAF1 adipogenin protein-coding chr18-3332 chr18 56869192 56869402 + 8.84 0.000 intron (NM_015285, intron 20 of 27) intron (NM_015285, intron 20 of 27) 202822 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr16-4446 chr16 53952494 53952704 + 8.84 0.000 intron (NM_001363894, intron 9 of 9) intron (NM_001363894, intron 9 of 9) -86794 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr1-12221 chr1 208513914 208514124 + 8.84 0.000 Intergenic MER63A|DNA|hAT-Blackjack -214669 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr1-10936 chr1 211515439 211515649 + 8.84 0.000 Intergenic CpG -22627 NM_183059 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr8-4979 chr8 134200229 134200439 + 8.84 0.000 Intergenic MIRb|SINE|MIR 313838 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr11-4517 chr11 117439469 117439679 + 8.84 0.000 intron (NM_020693, intron 22 of 32) intron (NM_020693, intron 22 of 32) 111720 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr6-5948 chr6 76057354 76057564 + 8.84 0.000 intron (NM_001563, intron 1 of 16) intron (NM_001563, intron 1 of 16) 15203 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr3-7653 chr3 33331529 33331739 + 8.84 0.000 intron (NR_146129, intron 4 of 15) L1MEd|LINE|L1 54192 NR_146123 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding chr1-4899 chr1 37554176 37554386 + 8.84 0.000 promoter-TSS (NM_024700) promoter-TSS (NM_024700) 12 NM_024700 79753 Hs.47232 NM_024700 ENSG00000163877 SNIP1 PML1|PMRED Smad nuclear interacting protein 1 protein-coding chr9-4926 chr9 12760006 12760216 + 8.84 0.000 intron (NR_125775, intron 2 of 3) intron (NR_125775, intron 2 of 3) -14909 NM_203403 286343 Hs.445356 NM_203403 ENSG00000153714 LURAP1L C9orf150|HYST0841|LRAP35b|bA3L8.2 leucine rich adaptor protein 1 like protein-coding chr6-7216 chr6 40144645 40144855 + 8.84 0.000 Intergenic ERVL-E-int|LTR|ERVL -210288 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chrX-1847 chrX 109934579 109934789 + 8.84 0.000 Intergenic Intergenic 64283 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr12-2632 chr12 131909008 131909218 + 8.84 0.000 intron (NM_003565, intron 7 of 27) CpG-6281 14491 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr11-5633 chr11 120603595 120603805 + 8.84 0.000 intron (NM_001282470, intron 1 of 19) intron (NM_001282470, intron 1 of 19) 39264 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr11-8902 chr11 16121344 16121554 + 8.84 0.000 intron (NM_033326, intron 6 of 15) L2a|LINE|L2 -151828 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr20-1669 chr20 33233196 33233406 + 8.84 0.000 Intergenic Intergenic -2695 NM_130852 51297 Hs.211092 NM_016583 ENSG00000198183 BPIFA1 LUNX|NASG|PLUNC|SPLUNC1|SPURT|bA49G10.5 BPI fold containing family A member 1 protein-coding chr11-8261 chr11 67744477 67744687 + 8.84 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger 60754 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chrX-3421 chrX 13573619 13573829 + 8.84 0.000 intron (NM_015507, intron 1 of 11) MIRb|SINE|MIR 4123 NM_001167890 25975 Hs.12844 NM_015507 ENSG00000198759 EGFL6 MAEG|W80 EGF like domain multiple 6 protein-coding chr12-2719 chr12 131861433 131861643 + 8.84 0.000 Intergenic AluJb|SINE|Alu -33084 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr10-7522 chr10 14043184 14043394 + 8.84 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -30995 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr2-6405 chr2 129860850 129861060 + 8.84 0.000 non-coding (NR_149127, exon 6 of 6) non-coding (NR_149127, exon 6 of 6) 16536 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr1-11393 chr1 50387204 50387414 + 8.84 0.000 Intergenic Intergenic 36134 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr20-3177 chr20 44452024 44452234 + 8.84 0.000 non-coding (NR_132343, exon 3 of 3) non-coding (NR_132343, exon 3 of 3) -1572 NR_109893 101927242 Hs.143307 NR_109893 ENSG00000168746 LINC01430 - long intergenic non-protein coding RNA 1430 ncRNA chr6-5143 chr6 124522125 124522335 + 8.84 0.000 intron (NM_001300738, intron 4 of 7) intron (NM_001300738, intron 4 of 7) 239225 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr1-14861 chr1 79190578 79190788 + 8.84 0.000 Intergenic LTR1F|LTR|ERV1 -183953 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr9-7782 chr9 78310932 78311142 + 8.84 0.000 intron (NM_021154, intron 6 of 7) intron (NM_021154, intron 6 of 7) 13912 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr9-3252 chr9 16032897 16033107 + 8.84 0.000 Intergenic Intergenic 220105 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr14-2796 chr14 21703753 21703963 + 8.84 0.000 Intergenic Intergenic -32841 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr2-8044 chr2 71736905 71737115 + 8.84 0.000 Intergenic Intergenic 270311 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr7-5112 chr7 4070463 4070673 + 8.84 0.000 intron (NM_152744, intron 20 of 44) intron (NM_152744, intron 20 of 44) -59117 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr12-6460 chr12 94838672 94838882 + 8.84 0.000 Intergenic L1MD3|LINE|L1 4323 NR_036685 160313 Hs.527883 NR_036685 ENSG00000216306 KRT19P2 KRT19P5 keratin 19 pseudogene 2 pseudo chr12-2583 chr12 116397194 116397404 + 8.84 0.000 Intergenic AluJb|SINE|Alu 31019 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr15-2951 chr15 48770979 48771189 + 8.84 0.000 intron (NM_014985, intron 13 of 25) intron (NM_014985, intron 13 of 25) 39985 NM_001194998 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr22-2994 chr22 50621533 50621743 + 8.84 0.000 Intergenic L2b|LINE|L2 6514 NM_000487 410 Hs.88251 NM_000487 ENSG00000100299 ARSA ASA|MLD arylsulfatase A protein-coding chr1-4168 chr1 24673339 24673549 + 8.84 0.000 TTS (NR_159380) TTS (NR_159380) 29865 NM_001366597 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr11-2989 chr11 110363240 110363450 + 8.84 0.000 intron (NR_135100, intron 1 of 3) HAL1ME|LINE|L1 8231 NR_135100 105369486 Hs.611557 NR_135100 LINC02732 - long intergenic non-protein coding RNA 2732 ncRNA chr3-8716 chr3 190291125 190291335 + 8.84 0.000 Intergenic L2a|LINE|L2 31216 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr3-9448 chr3 49248914 49249124 + 8.84 0.000 intron (NM_001135197, intron 6 of 7) intron (NM_001135197, intron 6 of 7) -25101 NR_036233 100422952 NR_036233 ENSG00000264633 MIR4271 - microRNA 4271 ncRNA chr12-4614 chr12 40492851 40493061 + 8.84 0.000 intron (NM_173600, intron 57 of 173) intron (NM_173600, intron 57 of 173) 99562 NM_173600 283463 Hs.632712 NM_173600 MUC19 MUC-19 mucin 19, oligomeric protein-coding chr10-4297 chr10 13640419 13640629 + 8.84 0.000 Intergenic Intergenic 53559 NM_003675 8559 Hs.660649 NM_003675 ENSG00000165630 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding chr11-9933 chr11 76084496 76084706 + 8.84 0.000 intron (NM_003369, intron 13 of 14) intron (NM_003369, intron 13 of 14) 121901 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr11-6752 chr11 83391827 83392037 + 8.84 0.000 Intergenic L1MB7|LINE|L1 -105525 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr8-1728 chr8 142474516 142474726 + 8.84 0.000 intron (NM_001702, intron 2 of 30) intron (NM_001702, intron 2 of 30) 24972 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr18-2865 chr18 9200556 9200766 + 8.84 0.000 intron (NM_001204056, intron 3 of 11) MIRb|SINE|MIR 63098 NM_001204056 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding chr11-4178 chr11 58075957 58076167 + 8.84 0.000 intron (NM_001005212, intron 2 of 2) MER58A|DNA|hAT-Charlie 43382 NM_001005211 219954 Hs.632122 NM_001005211 ENSG00000172377 OR9I1 OR11-228 olfactory receptor family 9 subfamily I member 1 protein-coding chr2-5834 chr2 235724884 235725094 + 8.84 0.000 intron (NM_001037131, intron 3 of 17) intron (NM_001037131, intron 3 of 17) -207068 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr21-1274 chr21 29174955 29175165 + 8.84 0.000 3' UTR (NM_001286624, exon 4 of 4) 3' UTR (NM_001286624, exon 4 of 4) -18434 NR_027072 193629 Hs.720711 NM_138968 ENSG00000215533 LINC00189 C21orf109|NCRNA00189 long intergenic non-protein coding RNA 189 ncRNA chr18-1573 chr18 34361528 34361738 + 8.84 0.000 Intergenic Intergenic -131657 NM_032975 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr11-4193 chr11 61683592 61683802 + 8.84 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 3306 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr1-4970 chr1 54653011 54653221 + 8.84 0.000 non-coding (NR_026782, exon 3 of 24) non-coding (NR_026782, exon 3 of 24) 11330 NM_001039464 374977 Hs.412482 NM_198547 ENSG00000184313 MROH7 C1orf175|HEATR8 maestro heat like repeat family member 7 protein-coding chr2-11841 chr2 19790545 19790755 + 8.84 0.000 Intergenic Intergenic -78204 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr9-4539 chr9 78051091 78051301 + 8.84 0.000 Intergenic Intergenic -19385 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chrX-1669 chrX 153692123 153692333 + 8.84 0.000 intron (NM_005629, intron 4 of 12) intron (NM_005629, intron 4 of 12) 2717 NM_001142806 6535 Hs.540696 NM_005629 ENSG00000130821 SLC6A8 CCDS1|CRT|CRTR|CT1|CTR5 solute carrier family 6 member 8 protein-coding chrX-2400 chrX 72648475 72648685 + 8.84 0.000 intron (NM_002637, intron 13 of 31) intron (NM_002637, intron 13 of 31) -40369 NR_110391 101928259 Hs.666679 NR_110391 ENSG00000231944 PHKA1-AS1 - PHKA1 antisense RNA 1 ncRNA chr11-2630 chr11 19742709 19742919 + 8.84 0.000 intron (NM_182964, intron 1 of 37) intron (NM_182964, intron 1 of 37) 17269 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr17-4081 chr17 79521170 79521380 + 8.84 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) -5127 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr2-8128 chr2 80497012 80497222 + 8.84 0.000 intron (NM_001282599, intron 3 of 11) intron (NM_001282599, intron 3 of 11) 183738 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr7-4590 chr7 14678816 14679026 + 8.84 0.000 intron (NM_001350717, intron 12 of 24) L2|LINE|L2 162529 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr7-9347 chr7 129185120 129185330 + 8.84 0.000 Intergenic MamRTE1|LINE|RTE-BovB -3408 NM_005631 6608 Hs.437846 NM_005631 ENSG00000128602 SMO CRJS|FZD11|Gx|SMOH smoothened, frizzled class receptor protein-coding chr21-897 chr21 17003221 17003431 + 8.84 0.000 Intergenic Intergenic 413089 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr9-7076 chr9 127015313 127015523 + 8.84 0.000 intron (NM_001190729, intron 4 of 17) MIRb|SINE|MIR 53193 NM_001190728 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr2-6128 chr2 221555773 221555983 + 8.84 0.000 intron (NM_001363748, intron 3 of 17) intron (NM_001363748, intron 3 of 17) 16426 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chrX-4862 chrX 104901598 104901808 + 8.84 0.000 intron (NM_017416, intron 2 of 10) MIRb|SINE|MIR 318990 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr4-2443 chr4 159438991 159439201 + 8.84 0.000 Intergenic Intergenic 171287 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr1-11978 chr1 85230637 85230847 + 8.84 0.000 Intergenic LTR16|LTR|ERVL 28920 NM_198077 148423 Hs.26226 NM_198077 ENSG00000162642 C1orf52 gm117 chromosome 1 open reading frame 52 protein-coding chr17-2724 chr17 72466398 72466608 + 8.84 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 123692 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr17-4689 chr17 28511456 28511666 + 8.84 0.000 intron (NM_001369369, intron 1 of 8) intron (NM_001369369, intron 1 of 8) 5213 NM_001369369 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chr3-8662 chr3 178755187 178755397 + 8.84 0.000 intron (NR_126561, intron 3 of 5) MamTip1|DNA|hAT-Tip100 105113 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA KI270442.1-16 KI270442.1 284434 284644 + 8.84 0.000 NA NA NA NA chr14-3956 chr14 21219667 21219877 + 8.84 0.000 intron (NM_031314, intron 5 of 8) L2a|LINE|L2 -12872 NR_038971 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA chr2-11513 chr2 237877562 237877772 + 8.84 0.000 intron (NM_001308353, intron 3 of 3) intron (NM_001308353, intron 3 of 3) 18044 NM_001308353 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr19-5264 chr19 48503455 48503665 + 8.84 0.000 intron (NM_001080434, intron 6 of 15) intron (NM_001080434, intron 6 of 15) 9629 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr10-3159 chr10 75971698 75971908 + 8.84 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 189042 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr6-3163 chr6 117531314 117531524 + 8.84 0.000 intron (NM_173674, intron 5 of 14) intron (NM_173674, intron 5 of 14) 48745 NM_001366459 285761 Hs.658304 NM_173674 ENSG00000164465 DCBLD1 dJ94G16.1 discoidin, CUB and LCCL domain containing 1 protein-coding chr9-6848 chr9 72051658 72051868 + 8.84 0.000 3' UTR (NM_001128618, exon 5 of 5) 3' UTR (NM_001128618, exon 5 of 5) 8842 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding chr2-5749 chr2 219243176 219243386 + 8.84 0.000 exon (NM_001286423, exon 3 of 17) exon (NM_001286423, exon 3 of 17) 350 NM_001286427 79411 Hs.181173 NM_024506 ENSG00000163521 GLB1L - galactosidase beta 1 like protein-coding chr1-7093 chr1 194189745 194189955 + 8.84 0.000 Intergenic Intergenic 885105 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr10-4242 chr10 131117480 131117690 + 8.84 0.000 intron (NM_174937, intron 8 of 11) intron (NM_174937, intron 8 of 11) 22367 NR_120623 101927489 Hs.659317 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA chr1-5624 chr1 20177341 20177551 + 8.84 0.000 promoter-TSS (NM_001367969) promoter-TSS (NM_001367969) -7 NM_001316722 391013 Hs.512512 NM_001105572 ENSG00000187980 PLA2G2C - phospholipase A2 group IIC protein-coding chr6-3708 chr6 168532544 168532754 + 8.84 0.000 intron (NM_001166412, intron 4 of 12) intron (NM_001166412, intron 4 of 12) 91465 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr16-6170 chr16 24517170 24517380 + 8.84 0.000 Intergenic L1M3|LINE|L1 -22291 NM_006910 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding chr12-2311 chr12 124288680 124288890 + 8.84 0.000 promoter-TSS (NM_181709) promoter-TSS (NM_181709) -379 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr13-4264 chr13 97575630 97575840 + 8.84 0.000 Intergenic MSTA|LTR|ERVL-MaLR 141566 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr14-4875 chr14 71355237 71355447 + 8.84 0.000 intron (NM_001354285, intron 2 of 24) intron (NM_001354285, intron 2 of 24) 34866 NM_001354285 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr15-2286 chr15 60350291 60350501 + 8.84 0.000 intron (NM_001002857, intron 12 of 13) intron (NM_001002857, intron 12 of 13) 47590 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr9-3102 chr9 37371323 37371533 + 8.84 0.000 Intergenic Intergenic -51268 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr19-3056 chr19 2345122 2345332 + 8.84 0.000 intron (NM_001077238, intron 12 of 14) intron (NM_001077238, intron 12 of 14) 16543 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr17-2795 chr17 6546373 6546583 + 8.84 0.000 intron (NM_031220, intron 1 of 19) intron (NM_031220, intron 1 of 19) 10077 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr7-3721 chr7 66366826 66367036 + 8.84 0.000 Intergenic Intergenic 33477 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr2-9294 chr2 222248377 222248587 + 8.84 0.000 intron (NM_181457, intron 4 of 7) intron (NM_181457, intron 4 of 7) -49665 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr5-5250 chr5 119597956 119598166 + 8.84 0.000 Intergenic MER57A1|LTR|ERV1 -31497 NM_001367956 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr2-13086 chr2 111478389 111478599 + 8.84 0.000 intron (NR_024373, intron 1 of 1) L1ME4a|LINE|L1 16667 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr8-4806 chr8 13357445 13357655 + 8.84 0.000 intron (NM_024767, intron 4 of 4) intron (NM_024767, intron 4 of 4) -80766 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr4-7855 chr4 102775749 102775959 + 8.84 0.000 Intergenic L1MC3|LINE|L1 -1183 NR_125932 102723704 Hs.638374 NR_125932 LOC102723704 - uncharacterized LOC102723704 ncRNA chr5-2145 chr5 88099654 88099864 + 8.84 0.000 Intergenic Intergenic 169086 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding chr5-8410 chr5 126939849 126940059 + 8.84 0.000 intron (NM_178450, intron 1 of 4) Tigger17a|DNA|TcMar-Tigger 90604 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr10-2059 chr10 97407353 97407563 + 8.84 0.000 Intergenic Intergenic -6088 NM_001145114 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr1-14177 chr1 33068226 33068436 + 8.84 0.000 Intergenic HERVK11-int|LTR|ERVK -12822 NM_001350400 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr7-4912 chr7 129877288 129877498 + 8.84 0.000 intron (NM_001202498, intron 3 of 6) intron (NM_001202498, intron 3 of 6) 75567 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr11-4523 chr11 117885941 117886151 + 8.84 0.000 Intergenic Intergenic -8616 NM_001164831 53826 Hs.744850 NM_022003 ENSG00000137726 FXYD6 - FXYD domain containing ion transport regulator 6 protein-coding chr8-4572 chr8 127760217 127760427 + 8.84 0.000 Intergenic MIRb|SINE|MIR 24091 NM_002467 4609 Hs.202453 NM_002467 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc MYC proto-oncogene, bHLH transcription factor protein-coding chr15-2244 chr15 101439084 101439294 + 8.84 0.000 intron (NM_138325, intron 2 of 13) intron (NM_138325, intron 2 of 13) 50518 NM_002570 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr17-6935 chr17 42401981 42402191 + 8.84 0.000 TTS (NM_012232) TTS (NM_012232) -13591 NM_139276 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr20-2353 chr20 15078969 15079179 + 8.84 0.000 intron (NM_001351663, intron 5 of 17) L2a|LINE|L2 -117766 NM_001351664 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr12-7031 chr12 38538454 38538664 + 8.84 0.000 Intergenic L2a|LINE|L2 221785 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr4-8385 chr4 150120159 150120369 + 8.84 0.000 intron (NM_001040260, intron 2 of 15) intron (NM_001040260, intron 2 of 15) 41819 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr13-1343 chr13 43848329 43848539 + 8.84 0.000 intron (NM_144974, intron 6 of 6) intron (NM_144974, intron 6 of 6) -30744 NM_001128303 144811 Hs.210586 NM_153218 ENSG00000179630 LACC1 C13orf31|FAMIN laccase domain containing 1 protein-coding chr14-3825 chr14 72904894 72905104 + 8.84 0.000 Intergenic Intergenic -10883 NM_001280543 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr5-5559 chr5 148573404 148573614 + 8.84 0.000 intron (NM_001040172, intron 1 of 5) MLT1I|LTR|ERVL-MaLR 63552 NM_001040169 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr1-9807 chr1 59026265 59026475 + 8.84 0.000 intron (NR_110626, intron 2 of 2) L2c|LINE|L2 5894 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr19-3836 chr19 13109031 13109241 + 8.84 0.000 intron (NM_001136035, intron 12 of 16) AluJr|SINE|Alu -6278 NM_005583 4066 Hs.46446 NM_005583 ENSG00000104903 LYL1 bHLHa18 LYL1 basic helix-loop-helix family member protein-coding chr14-2176 chr14 95432276 95432486 + 8.84 0.000 intron (NM_001363692, intron 15 of 16) intron (NM_001363692, intron 15 of 16) 43454 NM_152592 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|KASH3|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chr5-5051 chr5 91129832 91130042 + 8.84 0.000 intron (NR_003149, intron 87 of 89) intron (NR_003149, intron 87 of 89) 184465 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr16-6617 chr16 67708496 67708706 + 8.84 0.000 intron (NM_001243650, intron 1 of 1) intron (NM_001243650, intron 1 of 1) 10715 NM_030819 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr16-5671 chr16 70300768 70300978 + 8.84 0.000 intron (NM_001257175, intron 1 of 8) HAL1|LINE|L1 1820 NM_007242 11269 Hs.221761 NM_007242 ENSG00000157349 DDX19B DBP5|DDX19|RNAh DEAD-box helicase 19B protein-coding chr3-5161 chr3 59427275 59427485 + 8.84 0.000 Intergenic Intergenic 231117 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr5-8688 chr5 141774663 141774873 + 8.84 0.000 Intergenic Intergenic 91434 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr11-2268 chr11 130314440 130314650 + 8.84 0.000 promoter-TSS (NR_148980) promoter-TSS (NR_148980) 167 NM_014155 29068 Hs.721470 NM_014155 ENSG00000196323 ZBTB44 BTBD15|HSPC063|ZNF851 zinc finger and BTB domain containing 44 protein-coding chr3-8881 chr3 10710811 10711021 + 8.84 0.000 Intergenic Intergenic 53293 NR_152730 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA chr5-5235 chr5 117731509 117731719 + 8.84 0.000 intron (NR_104997, intron 1 of 2) intron (NR_104997, intron 1 of 2) 1253 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr4-4175 chr4 9960966 9961176 + 8.84 0.000 intron (NM_001001290, intron 6 of 12) MIRb|SINE|MIR 60426 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr1-16563 chr1 234485298 234485508 + 8.84 0.000 Intergenic Intergenic -6224 NM_005646 6894 Hs.498115 NM_005646 ENSG00000059588 TARBP1 TRM3|TRMT3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding chr8-6216 chr8 37561433 37561643 + 8.84 0.000 Intergenic Intergenic -40152 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr9-4131 chr9 135773028 135773238 + 8.84 0.000 intron (NM_001272003, intron 18 of 30) intron (NM_001272003, intron 18 of 30) 70948 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr6-6986 chr6 19905530 19905740 + 8.84 0.000 Intergenic Intergenic 68265 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr4-8533 chr4 163649326 163649536 + 8.84 0.000 intron (NM_001166373, intron 4 of 7) intron (NM_001166373, intron 4 of 7) -35897 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr17-5080 chr17 4088502 4088712 + 8.84 0.000 intron (NM_015113, intron 13 of 54) intron (NM_015113, intron 13 of 54) 54423 NM_015113 23140 Hs.277624 NM_015113 ENSG00000074755 ZZEF1 ZZZ4 zinc finger ZZ-type and EF-hand domain containing 1 protein-coding chr17-2842 chr17 19388011 19388221 + 8.84 0.000 promoter-TSS (NM_002404) promoter-TSS (NM_002404) -926 NM_001198695 4239 Hs.296049 NM_002404 ENSG00000166482 MFAP4 - microfibril associated protein 4 protein-coding chr2-6280 chr2 54513156 54513366 + 8.84 0.000 intron (NM_003128, intron 1 of 35) intron (NM_003128, intron 1 of 35) -15961 NR_002229 56969 Hs.657366 NM_020217 RPL23AP32 RPL23A_9_220 ribosomal protein L23a pseudogene 32 pseudo chr2-11391 chr2 216651608 216651818 + 8.84 0.000 intron (NM_000597, intron 1 of 3) intron (NM_000597, intron 1 of 3) -7854 NM_001313990 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr12-1187 chr12 94460334 94460544 + 8.84 0.000 promoter-TSS (NM_001346459) promoter-TSS (NM_001346459) 15 NM_001368039 51134 Hs.279209 NM_016122 ENSG00000173588 CEP83 CCDC41|NPHP18|NY-REN-58 centrosomal protein 83 protein-coding chr12-1590 chr12 6226136 6226346 + 8.84 0.000 intron (NM_001769, intron 2 of 7) intron (NM_001769, intron 2 of 7) 25841 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr6-8248 chr6 137611249 137611459 + 8.84 0.000 Intergenic LTR88b|LTR|Gypsy? -54292 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr3-3824 chr3 24242214 24242424 + 8.84 0.000 intron (NM_001354708, intron 2 of 9) L3b|LINE|CR1 90995 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chrX-2881 chrX 147744395 147744605 + 8.84 0.000 Intergenic Intergenic 167317 NR_024499 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr19-3144 chr19 29845611 29845821 + 8.84 0.000 Intergenic L2|LINE|L2 33725 NM_001322262 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr11-3894 chr11 109143178 109143388 + 8.84 0.000 Intergenic Intergenic -278907 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr2-8120 chr2 79776123 79776333 + 8.84 0.000 intron (NM_001282598, intron 3 of 17) intron (NM_001282598, intron 3 of 17) 90355 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr8-4318 chr8 98832536 98832746 + 8.84 0.000 intron (NM_001256312, intron 3 of 12) MER72|LTR|ERV1 -6953 NM_006281 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr19-2650 chr19 7600288 7600498 + 8.84 0.000 intron (NM_020902, intron 1 of 16) (CCAC)n|Simple_repeat|Simple_repeat 4530 NM_001080429 57662 Hs.17686 NM_020902 ENSG00000076826 CAMSAP3 KIAA1543|NEZHA|PPP1R80 calmodulin regulated spectrin associated protein family member 3 protein-coding chr9-4063 chr9 116937022 116937232 + 8.84 0.000 intron (NM_014010, intron 9 of 21) L2|LINE|L2 244074 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr17-6081 chr17 80316445 80316655 + 8.84 0.000 intron (NM_020954, intron 15 of 16) L1MC4|LINE|L1 55698 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr1-10685 chr1 186878546 186878756 + 8.84 0.000 intron (NM_024420, intron 3 of 17) intron (NM_024420, intron 3 of 17) 49702 NM_001311193 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr1-7038 chr1 176785808 176786018 + 8.84 0.000 intron (NM_020318, intron 17 of 22) intron (NM_020318, intron 17 of 22) 243532 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr8-4518 chr8 122339145 122339355 + 8.84 0.000 Intergenic Intergenic 229394 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr16-5036 chr16 57671405 57671615 + 8.84 0.000 intron (NM_001308360, intron 1 of 10) AluSx1|SINE|Alu 3204 NM_001308360 222487 Hs.383403 NM_170776 ENSG00000182885 ADGRG3 GPR97|PB99|PGR26 adhesion G protein-coupled receptor G3 protein-coding chr4-2217 chr4 139666139 139666349 + 8.84 0.000 intron (NM_001204367, intron 1 of 4) intron (NM_001204367, intron 1 of 4) 425 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr6-5944 chr6 74910535 74910745 + 8.84 0.000 Intergenic Intergenic 218142 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr14-1434 chr14 75515095 75515305 + 8.84 0.000 Intergenic Intergenic -7269 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr7-7304 chr7 42983043 42983253 + 8.84 0.000 Intergenic Intergenic 50772 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr6-3291 chr6 157841387 157841597 + 8.84 0.000 intron (NM_016224, intron 1 of 17) MER54A|LTR|ERVL 18246 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr10-5890 chr10 117720677 117720887 + 8.84 0.000 Intergenic Intergenic -175714 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chrX-694 chrX 53388938 53389148 + 8.84 0.000 intron (NM_001281463, intron 20 of 25) Charlie5|DNA|hAT-Charlie 16722 NR_106916 102465516 NR_106916 ENSG00000278204 MIR6857 hsa-mir-6857 microRNA 6857 ncRNA chr11-6266 chr11 57971101 57971311 + 8.84 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -52675 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr4-7081 chr4 32034558 32034768 + 8.84 0.000 intron (NR_125936, intron 1 of 2) intron (NR_125936, intron 1 of 2) -12241 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA chr13-1454 chr13 74050250 74050460 + 8.84 0.000 intron (NM_007249, intron 1 of 7) HAL1|LINE|L1 83574 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr1-6128 chr1 160218617 160218827 + 8.84 0.000 intron (NR_028104, intron 11 of 12) intron (NR_028104, intron 11 of 12) -9853 NR_123725 729867 Hs.674191 NR_123725 ENSG00000227741 LOC729867 - uncharacterized LOC729867 ncRNA chr3-9110 chr3 29283093 29283303 + 8.84 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 1886 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr17-7095 chr17 70786104 70786314 + 8.84 0.000 Intergenic Intergenic 415970 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr6-985 chr6 147508445 147508655 + 8.84 0.000 promoter-TSS (NM_001030060) promoter-TSS (NM_001030060) -140 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr3-4707 chr3 54304998 54305208 + 8.84 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 182551 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr2-14028 chr2 192487748 192487958 + 8.84 0.000 Intergenic LTR14C|LTR|ERVK -261992 NR_002769 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr3-8164 chr3 34644462 34644672 + 8.84 0.000 Intergenic MER2|DNA|TcMar-Tigger 749456 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr4-8319 chr4 144979429 144979639 + 8.84 0.000 Intergenic L1PA11|LINE|L1 117848 NM_001318367 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr3-10057 chr3 106144023 106144233 + 8.84 0.000 Intergenic Intergenic -274727 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr10-5725 chr10 101134026 101134236 + 8.84 0.000 intron (NM_005521, intron 1 of 2) CpG 2831 NM_005521 3195 Hs.89583 NM_005521 ENSG00000107807 TLX1 HOX11|TCL3 T cell leukemia homeobox 1 protein-coding chr22-748 chr22 20184226 20184436 + 8.84 0.000 Intergenic Intergenic 20587 NR_038460 284865 Hs.638498 NR_038460 ENSG00000249923 LOC284865 - uncharacterized LOC284865 ncRNA chr16-5059 chr16 69527232 69527442 + 8.84 0.000 Intergenic Intergenic 38531 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr2-7131 chr2 190978544 190978754 + 8.84 0.000 intron (NM_007315, intron 21 of 24) intron (NM_007315, intron 21 of 24) 35601 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chrX-395 chrX 16968752 16968962 + 8.84 0.000 intron (NM_001080975, intron 1 of 17) SVA_D|Retroposon|SVA 22199 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr8-4700 chr8 140529210 140529420 + 8.84 0.000 3' UTR (NM_012154, exon 19 of 19) 3' UTR (NM_012154, exon 19 of 19) 17319 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr19-3658 chr19 5155433 5155643 + 8.84 0.000 Intergenic Intergenic 185274 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr3-9496 chr3 50673806 50674016 + 8.84 0.000 Intergenic Intergenic -1016 NM_004947 1795 Hs.476284 NM_004947 ENSG00000088538 DOCK3 MOCA|NEDIDHA|PBP dedicator of cytokinesis 3 protein-coding chr15-2370 chr15 43243149 43243359 + 8.84 0.000 intron (NM_004245, intron 5 of 11) intron (NM_004245, intron 5 of 11) -22129 NM_001114134 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chr9-6390 chr9 33691732 33691942 + 8.84 0.000 Intergenic Intergenic -14417 NR_023917 11191 Hs.493716 NR_023917 ENSG00000237984 PTENP1 PTEN-rs|PTEN2|PTENpg1|PTH2|psiPTEN phosphatase and tensin homolog pseudogene 1 pseudo chr10-9079 chr10 125261941 125262151 + 8.84 0.000 Intergenic Intergenic -101016 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr17-4660 chr17 18128712 18128922 + 8.84 0.000 intron (NM_016239, intron 7 of 64) intron (NM_016239, intron 7 of 64) 20061 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr5-5154 chr5 108432126 108432336 + 8.84 0.000 Intergenic MER39|LTR|ERV1 -50133 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr15-3239 chr15 74809951 74810161 + 8.84 0.000 Intergenic Intergenic -2779 NM_021819 79748 Hs.620644 NM_021819 ENSG00000140506 LMAN1L ERGIC-53L|ERGL lectin, mannose binding 1 like protein-coding chr4-3572 chr4 1265022 1265232 + 8.84 0.000 Intergenic LTR54B|LTR|ERV1 15687 NR_033339 92070 Hs.561314 NM_052861 CTBP1-DT C4orf42|CTBP1-AS1|CTBP1-AS2 CTBP1 divergent transcript ncRNA chr2-14550 chr2 230751114 230751324 + 8.84 0.000 intron (NM_001130849, intron 1 of 8) intron (NM_001130849, intron 1 of 8) 37671 NM_001130849 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr12-3356 chr12 93061008 93061218 + 8.84 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -113253 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr17-6191 chr17 82903223 82903433 + 8.84 0.000 intron (NM_005993, intron 18 of 38) intron (NM_005993, intron 18 of 38) -63306 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr18-2030 chr18 45711971 45712181 + 8.84 0.000 Intergenic Intergenic -12105 NM_001146036 6563 Hs.101307 NM_015865 ENSG00000141469 SLC14A1 HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE solute carrier family 14 member 1 (Kidd blood group) protein-coding chr19-4333 chr19 1693408 1693618 + 8.84 0.000 Intergenic AluSx1|SINE|Alu -40898 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr3-6576 chr3 123699366 123699576 + 8.84 0.000 intron (NM_001321309, intron 17 of 32) intron (NM_001321309, intron 17 of 32) 9827 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr5-3432 chr5 153740712 153740922 + 8.84 0.000 intron (NM_000827, intron 11 of 15) MLT1I|LTR|ERVL-MaLR 158170 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr4-3187 chr4 7734157 7734367 + 8.84 0.000 intron (NM_020777, intron 24 of 26) intron (NM_020777, intron 24 of 26) -19828 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr1-8644 chr1 203773943 203774153 + 8.84 0.000 exon (NM_017773, exon 5 of 5) exon (NM_017773, exon 5 of 5) 4410 NM_001282878 54900 Hs.272794 NM_017773 ENSG00000122188 LAX1 LAX lymphocyte transmembrane adaptor 1 protein-coding chr14-1591 chr14 91019557 91019767 + 8.84 0.000 intron (NM_182398, intron 1 of 12) Tigger5b|DNA|TcMar-Tigger 40462 NM_001322237 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr8-4251 chr8 92061560 92061770 + 8.84 0.000 intron (NM_001198633, intron 1 of 10) intron (NM_001198633, intron 1 of 10) 969 NM_004349 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr22-928 chr22 38291482 38291692 + 8.84 0.000 3' UTR (NM_152221, exon 11 of 11) 3' UTR (NM_152221, exon 11 of 11) -18577 NM_001195072 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr1-6158 chr1 181139762 181139972 + 8.84 0.000 Intergenic Intergenic -34617 NR_125966 101928973 Hs.637822 NR_125966 ENSG00000237292 LINC01732 - long intergenic non-protein coding RNA 1732 ncRNA chr16-4604 chr16 68782084 68782294 + 8.84 0.000 intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) 44897 NM_004360 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr1-8316 chr1 48112458 48112668 + 8.84 0.000 intron (NR_026749, intron 9 of 9) L1ME1|LINE|L1 69865 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo chr6-3383 chr6 47905393 47905603 + 8.84 0.000 intron (NM_207499, intron 2 of 2) L2a|LINE|L2 118430 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr12-5013 chr12 82795995 82796205 + 8.84 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 108945 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-11484 chr2 233761856 233762066 + 8.84 0.000 intron (NM_000463, intron 1 of 4) intron (NM_000463, intron 1 of 4) 1688 NM_000463 54658 Hs.554822 NM_000463 ENSG00000241635 UGT1A1 BILIQTL1|GNT1|HUG-BR1|UDPGT|UDPGT 1-1|UGT1|UGT1A UDP glucuronosyltransferase family 1 member A1 protein-coding chr10-6482 chr10 43594589 43594799 + 8.84 0.000 Intergenic HERV3-int|LTR|ERV1 -11713 NM_001318142 220992 Hs.147440 NM_145312 ENSG00000198298 ZNF485 - zinc finger protein 485 protein-coding chr9-8527 chr9 126176065 126176275 + 8.84 0.000 Intergenic THE1B|LTR|ERVL-MaLR 99745 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr2-12032 chr2 29341113 29341323 + 8.84 0.000 intron (NM_004304, intron 5 of 28) intron (NM_004304, intron 5 of 28) -117318 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr11-7452 chr11 122197099 122197309 + 8.84 0.000 intron (NR_137180, intron 2 of 4) intron (NR_137180, intron 2 of 4) 5905 NR_024430 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr16-4153 chr16 4980076 4980286 + 8.84 0.000 intron (NM_014692, intron 2 of 15) MIR|SINE|MIR 21851 NM_014692 9717 Hs.512856 NM_014692 ENSG00000103184 SEC14L5 PRELID4B SEC14 like lipid binding 5 protein-coding chr12-6293 chr12 50421618 50421828 + 8.84 0.000 intron (NM_001352316, intron 2 of 15) intron (NM_001352316, intron 2 of 15) 20316 NM_001352314 113251 Hs.26613 NM_052879 ENSG00000161813 LARP4 PP13296 La ribonucleoprotein domain family member 4 protein-coding chr15-2358 chr15 39835683 39835893 + 8.84 0.000 intron (NM_001271854, intron 1 of 3) MLT1J|LTR|ERVL-MaLR -6512 NM_001271855 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr1-4607 chr1 152409887 152410097 + 8.84 0.000 exon (NM_016190, exon 3 of 3) exon (NM_016190, exon 3 of 3) 4271 NM_016190 49860 Hs.242057 NM_016190 ENSG00000143536 CRNN C1orf10|DRC1|PDRC1|SEP53 cornulin protein-coding chr9-4527 chr9 73291262 73291472 + 8.84 0.000 Intergenic Intergenic 139502 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr11-9355 chr11 47155174 47155384 + 8.84 0.000 intron (NM_001003677, intron 5 of 8) intron (NM_001003677, intron 5 of 8) 21600 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr6-1170 chr6 46491732 46491942 + 8.84 0.000 promoter-TSS (NM_001251974) promoter-TSS (NM_001251974) -215 NR_125837 101926898 Hs.639416 NR_125837 LOC101926898 - uncharacterized LOC101926898 ncRNA chr7-4900 chr7 127758199 127758409 + 8.84 0.000 intron (NM_014390, intron 10 of 23) intron (NM_014390, intron 10 of 23) 106110 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr11-3618 chr11 70215381 70215591 + 8.84 0.000 Intergenic HERVH-int|LTR|ERV1 12323 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr8-2241 chr8 33485186 33485396 + 8.84 0.000 intron (NM_032509, intron 1 of 9) CpG 109 NM_032509 84549 Hs.583805 NM_032509 ENSG00000198042 MAK16 MAK16L|RBM13 MAK16 homolog protein-coding chr15-2938 chr15 47661959 47662169 + 8.84 0.000 intron (NM_001198999, intron 4 of 19) intron (NM_001198999, intron 4 of 19) -55441 NM_001358352 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr3-7501 chr3 160692062 160692272 + 8.84 0.000 Intergenic Intergenic 15007 NM_025047 80117 Hs.287702 NM_025047 ENSG00000179674 ARL14 ARF7 ADP ribosylation factor like GTPase 14 protein-coding chr6-7958 chr6 112144931 112145141 + 8.84 0.000 intron (NM_001105206, intron 18 of 38) intron (NM_001105206, intron 18 of 38) 57445 NM_001033564 619208 Hs.591340 NM_001033564 ENSG00000203778 FAM229B C6orf225 family with sequence similarity 229 member B protein-coding chr4-2547 chr4 76967525 76967735 + 8.84 0.000 intron (NM_018243, intron 1 of 9) MER102a|DNA|hAT-Charlie 17878 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr3-4401 chr3 196741360 196741570 + 8.84 0.000 intron (NM_002577, intron 1 of 14) intron (NM_002577, intron 1 of 14) 1608 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr5-2179 chr5 132065428 132065638 + 8.84 0.000 Intergenic Intergenic 4878 NM_000588 3562 Hs.694 NM_000588 ENSG00000164399 IL3 IL-3|MCGF|MULTI-CSF interleukin 3 protein-coding chr6-2117 chr6 1662950 1663160 + 8.84 0.000 intron (NM_001253846, intron 9 of 10) intron (NM_001253846, intron 9 of 10) 53140 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr17-2989 chr17 69485319 69485529 + 8.84 0.000 non-coding (NR_145982, exon 1 of 2) non-coding (NR_145982, exon 1 of 2) 108 NR_145982 105371880 NR_145982 LOC105371880 - uncharacterized LOC105371880 ncRNA chr2-5126 chr2 21772781 21772991 + 8.84 0.000 Intergenic Intergenic -62234 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr2-2779 chr2 240500923 240501133 + 8.84 0.000 intron (NM_001282780, intron 9 of 13) intron (NM_001282780, intron 9 of 13) -44328 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr10-9137 chr10 127968237 127968447 + 8.84 0.000 intron (NM_001316676, intron 2 of 21) intron (NM_001316676, intron 2 of 21) -18938 NM_001316677 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr18-2713 chr18 63799248 63799458 + 8.84 0.000 intron (NM_001040147, intron 6 of 7) intron (NM_001040147, intron 6 of 7) 21576 NM_001261830 8710 Hs.138202 NM_003784 ENSG00000166396 SERPINB7 MEGSIN|PPKN|TP55 serpin family B member 7 protein-coding chr1-12244 chr1 216649485 216649695 + 8.84 0.000 intron (NM_001243505, intron 3 of 6) (ATATAC)n|Simple_repeat|Simple_repeat 73839 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr5-3804 chr5 82981270 82981480 + 8.84 0.000 Intergenic L1MA4|LINE|L1 82962 NR_003139 677765 Hs.693283 NR_003139 ENSG00000238835 SCARNA18 SCARNA18A|U109 small Cajal body-specific RNA 18 ncRNA chr3-10996 chr3 179470027 179470237 + 8.84 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -18662 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr12-7544 chr12 70942636 70942846 + 8.84 0.000 Intergenic SATR2|Satellite|Satellite -22003 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr3-3842 chr3 32332487 32332697 + 8.84 0.000 intron (NM_001320308, intron 1 of 2) intron (NM_001320308, intron 1 of 2) -59261 NM_138410 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr16-5546 chr16 28032041 28032251 + 8.84 0.000 intron (NM_001109763, intron 1 of 6) intron (NM_001109763, intron 1 of 6) 31568 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr8-4550 chr8 125173426 125173636 + 8.84 0.000 intron (NR_146191, intron 5 of 8) ERVL-E-int|LTR|ERVL 81671 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding chr5-4062 chr5 55742714 55742924 + 8.84 0.000 intron (NM_024415, intron 2 of 21) L2c|LINE|L2 4758 NM_024415 54514 Hs.223581 NM_019039 ENSG00000152670 DDX4 VASA DEAD-box helicase 4 protein-coding chr2-5928 chr2 25204445 25204655 + 8.84 0.000 intron (NR_132378, intron 1 of 1) CpG 237 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr1-6227 chr1 219905774 219905984 + 8.84 0.000 Intergenic Intergenic 22772 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr12-4249 chr12 113418017 113418227 + 8.84 0.000 Intergenic Intergenic -4258 NM_001304993 113675 Hs.337594 NM_138432 ENSG00000139410 SDSL SDH 2|SDS-RS1|TDH|cSDH serine dehydratase like protein-coding chr1-10098 chr1 96962935 96963145 + 8.84 0.000 Intergenic Intergenic -132883 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr2-8848 chr2 173888029 173888239 + 8.84 0.000 Intergenic MER91A|DNA|hAT-Tip100 75746 NM_001017371 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chrX-758 chrX 21839364 21839574 + 8.84 0.000 promoter-TSS (NM_015884) promoter-TSS (NM_015884) -148 NM_015884 51360 Hs.443490 NM_015884 ENSG00000012174 MBTPS2 BRESEK|IFAP|KFSD|KFSDX|OI19|OLMSX|S2P membrane bound transcription factor peptidase, site 2 protein-coding chr7-8324 chr7 42071965 42072175 + 8.84 0.000 intron (NM_000168, intron 4 of 14) intron (NM_000168, intron 4 of 14) 165139 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr9-5288 chr9 83649086 83649296 + 8.84 0.000 Intergenic MER20B|DNA|hAT-Charlie 26048 NR_046421 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding chr7-2573 chr7 127667831 127668041 + 8.84 0.000 intron (NM_014390, intron 1 of 23) intron (NM_014390, intron 1 of 23) 15742 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr1-3496 chr1 111619699 111619909 + 8.84 0.000 promoter-TSS (NM_001010935) promoter-TSS (NM_001010935) 21 NM_002884 5906 Hs.190334 NM_002884 ENSG00000116473 RAP1A C21KG|G-22K|KREV-1|KREV1|RAP1|SMGP21 RAP1A, member of RAS oncogene family protein-coding chr15-2158 chr15 77607216 77607426 + 8.84 0.000 Intergenic Intergenic 25591 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr18-582 chr18 12074748 12074958 + 8.84 0.000 Intergenic Intergenic -18990 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr6-8335 chr6 147209616 147209826 + 8.84 0.000 intron (NM_139244, intron 2 of 25) intron (NM_139244, intron 2 of 25) -5107 NR_034115 729178 Hs.557608 NR_034115 STXBP5-AS1 - STXBP5 antisense RNA 1 ncRNA chr17-8600 chr17 80742941 80743151 + 8.84 0.000 intron (NM_020761, intron 5 of 33) intron (NM_020761, intron 5 of 33) 62586 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr5-4961 chr5 78222180 78222390 + 8.84 0.000 intron (NM_003664, intron 6 of 26) intron (NM_003664, intron 6 of 26) 72413 NM_001271769 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding chr7-2521 chr7 46080705 46080915 + 8.84 0.000 Intergenic MIR|SINE|MIR -159538 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr1-13741 chr1 16041288 16041498 + 8.84 0.000 Intergenic Intergenic -2343 NM_000085 1188 Hs.352243 NM_000085 ENSG00000184908 CLCNKB CLCKB|ClC-K2|ClC-Kb chloride voltage-gated channel Kb protein-coding chr6-3325 chr6 169428090 169428300 + 8.84 0.000 Intergenic Intergenic -174081 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr13-3099 chr13 52078502 52078712 + 8.84 0.000 intron (NM_001365552, intron 17 of 23) intron (NM_001365552, intron 17 of 23) -50288 NR_110306 101929657 Hs.637461 NR_110306 ENSG00000273523 LOC101929657 - uncharacterized LOC101929657 ncRNA chr17-6757 chr17 827614 827824 + 8.84 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 36392 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr17-5806 chr17 64252894 64253104 + 8.84 0.000 intron (NM_018469, intron 1 of 11) L2a|LINE|L2 10261 NM_001288732 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr12-2992 chr12 120907222 120907432 + 8.84 0.000 intron (NR_131215, intron 1 of 1) intron (NR_131215, intron 1 of 1) 2632 NR_131215 105500240 Hs.742757 NR_131215 XLOC_009911 - uncharacterized LOC105500240 ncRNA chr3-10497 chr3 135857105 135857315 + 8.84 0.000 Intergenic Intergenic -108518 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr9-3600 chr9 83965802 83966012 + 8.84 0.000 Intergenic Intergenic 3950 NR_029605 407043 NR_029605 ENSG00000284179 MIR7-1 MIRN7-1|hsa-mir-7-1|mir-7-1 microRNA 7-1 ncRNA chr2-7421 chr2 9875514 9875724 + 8.84 0.000 intron (NM_001318977, intron 6 of 13) THE1B|LTR|ERVL-MaLR 32145 NM_005680 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr6-5983 chr6 91603623 91603833 + 8.84 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 82068 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr3-9876 chr3 81319574 81319784 + 8.84 0.000 Intergenic Intergenic 325811 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chrX-2403 chrX 73474407 73474617 + 8.84 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 27258 NM_005193 1046 Hs.553488 NM_005193 ENSG00000131264 CDX4 - caudal type homeobox 4 protein-coding chr13-2840 chr13 108552149 108552359 + 8.84 0.000 Intergenic LTR102_Mam|LTR|ERVL -43651 NM_015011 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr17-5636 chr17 49688211 49688421 + 8.84 0.000 Intergenic L2b|LINE|L2 -10153 NM_001007226 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding chr2-6054 chr2 128270462 128270672 + 8.84 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 48301 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr6-7857 chr6 105845579 105845789 + 8.84 0.000 Intergenic Intergenic -240652 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr15-1398 chr15 40844667 40844877 + 8.84 0.000 promoter-TSS (NR_146466) promoter-TSS (NR_146466) -248 NR_146468 102724362 Hs.569458 NR_146466 ENSG00000261183 SPINT1-AS1 - SPINT1 antisense RNA 1 ncRNA chr12-3661 chr12 117601534 117601744 + 8.84 0.000 intron (NM_173598, intron 5 of 19) MLT1C|LTR|ERVL-MaLR -239837 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr19-1326 chr19 791710 791920 + 8.84 0.000 Intergenic Intergenic -5637 NM_031990 5725 Hs.172550 NM_002819 ENSG00000011304 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding chr5-5109 chr5 100734944 100735154 + 8.84 0.000 Intergenic Intergenic 81516 NR_031686 100302288 NR_031686 ENSG00000221263 MIR548P MIRN548P|hsa-mir-548p microRNA 548p ncRNA chr4-5891 chr4 131239701 131239911 + 8.84 0.000 Intergenic THE1D|LTR|ERVL-MaLR -525032 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr9-5410 chr9 94818195 94818405 + 8.84 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 8338 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr14-2624 chr14 61807805 61808015 + 8.84 0.000 Intergenic L2|LINE|L2 -4252 NM_001367650 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr1-2745 chr1 32262899 32263109 + 8.84 0.000 intron (NM_005356, intron 1 of 12) intron (NM_005356, intron 1 of 12) -11107 NM_001042771 3932 Hs.470627 NM_005356 ENSG00000182866 LCK IMD22|LSK|YT16|p56lck|pp58lck LCK proto-oncogene, Src family tyrosine kinase protein-coding chr1-15625 chr1 162371687 162371897 + 8.84 0.000 Intergenic Intergenic 5062 NM_182581 284680 Hs.97784 NM_182581 ENSG00000171722 SPATA46 C1orf111|HSD20 spermatogenesis associated 46 protein-coding chr1-15972 chr1 193468860 193469070 + 8.84 0.000 Intergenic Intergenic 164220 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr2-5342 chr2 87593851 87594061 + 8.84 0.000 Intergenic Intergenic -35799 NR_039634 100616499 NR_039634 ENSG00000265507 MIR4435-1 mir-4435-1 microRNA 4435-1 ncRNA chr8-4034 chr8 60534271 60534481 + 8.84 0.000 intron (NM_001242644, intron 1 of 6) AluJo|SINE|Alu 17389 NM_002865 5862 Hs.369017 NM_002865 ENSG00000104388 RAB2A LHX|RAB2 RAB2A, member RAS oncogene family protein-coding chr2-5495 chr2 142349552 142349762 + 8.84 0.000 Intergenic LTR33A|LTR|ERVL -217956 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr1-9909 chr1 71821520 71821730 + 8.84 0.000 intron (NR_046218, intron 1 of 2) ERV3-16A3_I-int|LTR|ERVL 15387 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr7-4049 chr7 1176057 1176267 + 8.84 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 15377 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr22-1394 chr22 38122927 38123137 + 8.84 0.000 intron (NM_001199562, intron 10 of 15) intron (NM_001199562, intron 10 of 15) -12348 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr12-5741 chr12 125964228 125964438 + 8.84 0.000 intron (NR_034132, intron 3 of 5) L2c|LINE|L2 19041 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr17-5624 chr17 49279382 49279592 + 8.84 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 8967 NR_106745 102465137 NR_106745 ENSG00000273500 MIR6129 hsa-mir-6129 microRNA 6129 ncRNA chr1-13113 chr1 193513194 193513404 + 8.84 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 208554 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr4-3173 chr4 1899891 1900101 + 8.84 0.000 promoter-TSS (NM_133334) promoter-TSS (NM_133334) -630 NM_133334 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr8-1343 chr8 69834343 69834553 + 8.84 0.000 intron (NM_030958, intron 1 of 9) CpG 530 NM_030958 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr4-1429 chr4 65298428 65298638 + 8.84 0.000 Intergenic AluSx3|SINE|Alu -294033 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr19-2529 chr19 31076292 31076502 + 8.84 0.000 Intergenic Intergenic -91113 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr18-2267 chr18 74571336 74571546 + 8.84 0.000 intron (NM_032649, intron 7 of 11) intron (NM_032649, intron 7 of 11) 26394 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr4-5329 chr4 182604127 182604337 + 8.84 0.000 intron (NM_001080477, intron 4 of 27) intron (NM_001080477, intron 4 of 27) 313021 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr10-4776 chr10 5203978 5204188 + 8.84 0.000 intron (NM_001818, intron 2 of 8) intron (NM_001818, intron 2 of 8) 7246 NM_001818 1109 Hs.567245 NM_001818 ENSG00000198610 AKR1C4 3-alpha-HSD|C11|CDR|CHDR|DD-4|DD4|HAKRA aldo-keto reductase family 1 member C4 protein-coding chrX-3163 chrX 24834474 24834684 + 8.84 0.000 intron (NM_016937, intron 32 of 36) AluSx1|SINE|Alu 90138 NR_003007 677773 Hs.689695 NR_003007 ENSG00000251869 SCARNA23 ACA12 small Cajal body-specific RNA 23 ncRNA chr17-6621 chr17 63171572 63171782 + 8.84 0.000 intron (NM_025185, intron 4 of 25) intron (NM_025185, intron 4 of 25) 205442 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chrX-2684 chrX 118440538 118440748 + 8.84 0.000 intron (NM_001184966, intron 13 of 17) MER103C|DNA|hAT-Charlie 54249 NR_031685 100302214 NR_031685 ENSG00000221463 MIR1277 MIRN1277|hsa-mir-1277 microRNA 1277 ncRNA chr6-4511 chr6 37718814 37719024 + 8.84 0.000 Intergenic AluJb|SINE|Alu -21036 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr16-6973 chr16 86324201 86324411 + 8.84 0.000 Intergenic Intergenic 21373 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr13-1087 chr13 77072987 77073197 + 8.84 0.000 intron (NM_015057, intron 68 of 82) L1MB8|LINE|L1 -2422 NR_046716 100874212 Hs.569288 NR_046716 ENSG00000236051 MYCBP2-AS1 - MYCBP2 antisense RNA 1 ncRNA chr4-6322 chr4 89290058 89290268 + 8.84 0.000 intron (NM_198281, intron 1 of 1) AluJb|SINE|Alu 17637 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr11-6222 chr11 46864530 46864740 + 8.84 0.000 intron (NM_002334, intron 35 of 37) intron (NM_002334, intron 35 of 37) 18224 NR_038909 100507401 Hs.675301 NR_038909 ENSG00000247675 LRP4-AS1 - LRP4 antisense RNA 1 ncRNA chr14-2730 chr14 96762755 96762965 + 8.84 0.000 intron (NR_146552, intron 3 of 3) MLT1J|LTR|ERVL-MaLR 21669 NR_146552 105370646 NR_146552 ENSG00000258979 LINC02299 - long intergenic non-protein coding RNA 2299 ncRNA chr3-5558 chr3 4351024 4351234 + 8.84 0.000 Intergenic Intergenic 47825 NM_001320676 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr8-3362 chr8 47428809 47429019 + 8.84 0.000 intron (NM_001080394, intron 7 of 19) intron (NM_001080394, intron 7 of 19) 167976 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr14-1632 chr14 104015133 104015343 + 8.84 0.000 intron (NM_153046, intron 21 of 35) intron (NM_153046, intron 21 of 35) -70462 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr3-2860 chr3 38087053 38087263 + 8.84 0.000 intron (NM_007335, intron 9 of 36) intron (NM_007335, intron 9 of 36) 47950 NM_001321153 9940 Hs.714499 NM_007335 ENSG00000008226 DLEC1 CFAP81|DLC-1|DLC1|F56 DLEC1 cilia and flagella associated protein protein-coding chr2-6353 chr2 96134257 96134467 + 8.84 0.000 intron (NM_001002036, intron 3 of 8) intron (NM_001002036, intron 3 of 8) 4074 NM_001002036 431705 Hs.447993 NM_001002036 ENSG00000188886 ASTL SAS1B astacin like metalloendopeptidase protein-coding chr13-4326 chr13 101499525 101499735 + 8.84 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 9678 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr19-6207 chr19 5770571 5770781 + 8.84 0.000 intron (NM_152784, intron 18 of 21) AluJr|SINE|Alu 14070 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chr18-1173 chr18 21513484 21513694 + 8.84 0.000 intron (NM_001142966, intron 27 of 32) intron (NM_001142966, intron 27 of 32) 87115 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding chr1-14237 chr1 36492983 36493193 + 8.84 0.000 Intergenic Intergenic -9774 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr18-3121 chr18 37398349 37398559 + 8.84 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 68050 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr7-5321 chr7 26443349 26443559 + 8.84 0.000 intron (NR_148500, intron 2 of 5) intron (NR_148500, intron 2 of 5) -44036 NR_136272 105375304 Hs.735352 NR_136270 ENSG00000225792 LOC105375304 - uncharacterized LOC105375304 ncRNA chr3-8399 chr3 101454370 101454580 + 8.84 0.000 intron (NM_020654, intron 4 of 23) AluJb|SINE|Alu 58737 NM_001077203 57337 Hs.529551 NM_020654 ENSG00000138468 SENP7 - SUMO specific peptidase 7 protein-coding chr11-10099 chr11 86509292 86509502 + 8.84 0.000 intron (NM_001014811, intron 3 of 13) intron (NM_001014811, intron 3 of 13) 134510 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr1-5988 chr1 43390412 43390622 + 8.84 0.000 promoter-TSS (NM_201542) promoter-TSS (NM_201542) 618 NM_015284 23334 Hs.643560 NM_015284 ENSG00000198198 SZT2 C1orf84|EIEE18|KIAA0467|SZT2A|SZT2B SZT2 subunit of KICSTOR complex protein-coding chr2-9588 chr2 241110590 241110800 + 8.84 0.000 intron (NM_015148, intron 15 of 17) intron (NM_015148, intron 15 of 17) -8363 NR_028051 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr1-11921 chr1 56565106 56565316 + 8.84 0.000 intron (NM_003713, intron 1 of 5) intron (NM_003713, intron 1 of 5) 14352 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr2-11379 chr2 212667841 212668051 + 8.84 0.000 Intergenic Intergenic -127385 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr1-7991 chr1 206116503 206116713 + 8.84 0.000 exon (NM_000707, exon 1 of 2) exon (NM_000707, exon 1 of 2) 780 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr11-10711 chr11 130874461 130874671 + 8.84 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -4319 NR_125382 103611081 Hs.430300 NR_125382 ENSG00000255455 LOC103611081 - uncharacterized LOC103611081 ncRNA chr6-5484 chr6 162419682 162419892 + 8.84 0.000 intron (NM_004562, intron 2 of 11) (AGAGAC)n|Simple_repeat|Simple_repeat -307345 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr14-3379 chr14 92844778 92844988 + 8.84 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 50578 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr11-6327 chr11 62290219 62290429 + 8.84 0.000 Intergenic L1PA4|LINE|L1 8751 NM_206998 404552 Hs.473247 NM_206998 ENSG00000197745 SCGB1D4 IIS secretoglobin family 1D member 4 protein-coding chr21-1813 chr21 39476236 39476446 + 8.84 0.000 intron (NM_001317740, intron 3 of 5) L2-3_Crp|LINE|L2 24487 NM_007341 6450 Hs.473847 NM_007341 ENSG00000185437 SH3BGR 21-GARP SH3 domain binding glutamate rich protein protein-coding chr2-10745 chr2 34586936 34587146 + 8.84 0.000 Intergenic L2a|LINE|L2 -90516 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr1-9858 chr1 65067909 65068119 + 8.84 0.000 promoter-TSS (NM_001321852) promoter-TSS (NM_001321852) -268 NM_001321853 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr10-6923 chr10 50439712 50439922 + 8.84 0.000 intron (NM_147156, intron 5 of 10) intron (NM_147156, intron 5 of 10) 184139 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr7-3146 chr7 66903048 66903258 + 8.84 0.000 promoter-TSS (NR_136637) promoter-TSS (NR_136637) -967 NR_136637 644794 Hs.552124 NR_136637 LINC02604 lncHERG long intergenic non-protein coding RNA 2604 ncRNA chr1-8484 chr1 119204131 119204341 + 8.84 0.000 intron (NR_125975, intron 4 of 6) LTR104_Mam|LTR|Gypsy -63564 NM_015836 10352 Hs.523506 NM_015836 ENSG00000116874 WARS2 NEMMLAS|TrpRS|mtTrpRS tryptophanyl tRNA synthetase 2, mitochondrial protein-coding chr1-7377 chr1 24718987 24719197 + 8.84 0.000 Intergenic AluJr|SINE|Alu -26355 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr8-5051 chr8 27126844 27127054 + 8.84 0.000 Intergenic L1MC3|LINE|L1 -77986 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA chr22-3026 chr22 27041238 27041448 + 8.84 0.000 Intergenic AluY|SINE|Alu 19175 NM_001318329 284898 Hs.350813 NM_001318329 LOC284898 - uncharacterized LOC284898 protein-coding chr4-5290 chr4 176498085 176498295 + 8.84 0.000 Intergenic Intergenic 178224 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr13-1422 chr13 40402280 40402490 + 8.84 0.000 intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 78621 NR_024506 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr15-3959 chr15 42839734 42839944 + 8.84 0.000 intron (NM_173500, intron 4 of 14) MSTD|LTR|ERVL-MaLR 80939 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr1-2821 chr1 33309307 33309517 + 8.84 0.000 intron (NM_001080438, intron 4 of 4) SVA_A|Retroposon|SVA 11686 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding chr12-4888 chr12 64633895 64634105 + 8.84 0.000 intron (NR_040718, intron 1 of 3) AluJb|SINE|Alu -11395 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr8-3495 chr8 104856068 104856278 + 8.72 0.000 Intergenic (TTCC)n|Simple_repeat|Simple_repeat -267149 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr10-3676 chr10 102764257 102764467 + 8.72 0.000 intron (NM_001083913, intron 1 of 3) intron (NM_001083913, intron 1 of 3) -11859 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr3-2176 chr3 185912736 185912946 + 8.72 0.000 Intergenic AluSg|SINE|Alu 25173 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr8-4117 chr8 72517763 72517973 + 8.72 0.000 Intergenic (TTGT)n|Simple_repeat|Simple_repeat -19357 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr3-5740 chr3 19201528 19201738 + 8.72 0.000 intron (NM_144633, intron 1 of 15) intron (NM_144633, intron 1 of 15) 53123 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr6-3873 chr6 49202389 49202599 + 8.72 0.000 Intergenic L1MD2|LINE|L1 260759 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr12-3222 chr12 56528780 56528990 + 8.72 0.000 intron (NM_002898, intron 1 of 13) AluJb|SINE|Alu 7065 NM_002898 5939 Hs.505729 NM_002898 ENSG00000076067 RBMS2 SCR3 RNA binding motif single stranded interacting protein 2 protein-coding chr6-2151 chr6 14804932 14805142 + 8.72 0.000 Intergenic Intergenic -441032 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr5-3238 chr5 94973722 94973932 + 8.72 0.000 intron (NM_001297777, intron 2 of 19) MIR|SINE|MIR 108039 NM_001002796 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr2-8507 chr2 128585918 128586128 + 8.72 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -267155 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr10-1663 chr10 117374555 117374765 + 8.72 0.000 exon (NM_173791, exon 1 of 5) exon (NM_173791, exon 1 of 5) 780 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr1-6812 chr1 91894031 91894241 + 8.72 0.000 intron (NM_001195684, intron 2 of 17) L2a|LINE|L2 -7985 NM_003243 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr2-6745 chr2 37107735 37107945 + 8.72 0.000 intron (NM_002759, intron 15 of 16) intron (NM_002759, intron 15 of 16) 23389 NM_001278505 253635 Hs.595250 NM_174931 ENSG00000152133 GPATCH11 CCDC75|CENP-Y|CENPY G-patch domain containing 11 protein-coding chr4-4331 chr4 33936027 33936237 + 8.72 0.000 intron (NR_125902, intron 4 of 4) intron (NR_125902, intron 4 of 4) 103761 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr6-2622 chr6 143902222 143902432 + 8.72 0.000 intron (NM_001013623, intron 5 of 7) intron (NM_001013623, intron 5 of 7) 37853 NM_001013623 153918 Hs.121188 NM_001013623 ENSG00000118491 ZC2HC1B C6orf94|FAM164B|dJ468K18.5 zinc finger C2HC-type containing 1B protein-coding chr1-10683 chr1 186779106 186779316 + 8.72 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -49689 NM_024420 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr7-6034 chr7 108867068 108867278 + 8.72 0.000 Intergenic Intergenic 17414 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr1-11173 chr1 239728864 239729074 + 8.72 0.000 intron (NM_000740, intron 3 of 4) Charlie1a|DNA|hAT-Charlie -9850 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr6-6340 chr6 54102998 54103208 + 8.72 0.000 intron (NM_001281746, intron 1 of 11) L2a|LINE|L2 -8340 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr22-2625 chr22 32811177 32811387 + 8.72 0.000 intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 10466 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr11-3576 chr11 59823119 59823329 + 8.72 0.000 Intergenic Intergenic -12446 NM_017840 54948 Hs.530734 NM_017840 ENSG00000166902 MRPL16 L16mt|MRP-L16|PNAS-111 mitochondrial ribosomal protein L16 protein-coding chr14-4292 chr14 20663212 20663422 + 8.72 0.000 Intergenic Intergenic -20860 NM_001145 283 Hs.283749 NM_001145 ENSG00000214274 ANG ALS9|HEL168|RAA1|RNASE4|RNASE5 angiogenin protein-coding chr16-5992 chr16 6028480 6028690 + 8.72 0.000 intron (NM_018723, intron 1 of 15) AluJr|SINE|Alu 8882 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr4-3476 chr4 123505556 123505766 + 8.72 0.000 Intergenic (CGC)n|Simple_repeat|Simple_repeat 106121 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr10-7048 chr10 83290180 83290390 + 8.72 0.000 Intergenic Intergenic 386804 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr17-3979 chr17 65390102 65390312 + 8.72 0.000 Intergenic MER117|DNA|hAT-Charlie -67334 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr1-10825 chr1 203597489 203597699 + 8.72 0.000 Intergenic Intergenic -29193 NM_001001396 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chrX-1083 chrX 149762823 149763033 + 8.72 0.000 Intergenic Intergenic -11140 NM_016153 100506164 Hs.656936 NM_016153 ENSG00000171116 HSFX1 LW-1 heat shock transcription factor family, X-linked 1 protein-coding chr1-6709 chr1 56411567 56411777 + 8.72 0.000 Intergenic Intergenic -3291 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr6-8552 chr6 161930388 161930598 + 8.72 0.000 intron (NM_004562, intron 6 of 11) intron (NM_004562, intron 6 of 11) 459516 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr3-10551 chr3 140819935 140820145 + 8.72 0.000 Intergenic Intergenic -121796 NM_001104647 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr20-3254 chr20 956530 956740 + 8.72 0.000 Intergenic Intergenic -40301 NM_001322809 51378 Hs.278973 NM_015985 ENSG00000101280 ANGPT4 ANG3|ANG4 angiopoietin 4 protein-coding chr2-13254 chr2 126999479 126999689 + 8.72 0.000 Intergenic Intergenic 82481 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr3-8383 chr3 95809264 95809474 + 8.72 0.000 Intergenic Intergenic -126176 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr2-3919 chr2 53948615 53948825 + 8.72 0.000 intron (NM_014614, intron 2 of 46) intron (NM_014614, intron 2 of 46) 22273 NM_014614 23198 Hs.413801 NM_014614 ENSG00000068878 PSME4 PA200 proteasome activator subunit 4 protein-coding chr9-5274 chr9 82152309 82152519 + 8.72 0.000 Intergenic L1M4a2|LINE|L1 163642 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr2-13701 chr2 165952843 165953053 + 8.72 0.000 intron (NM_024753, intron 1 of 28) intron (NM_024753, intron 1 of 28) 828 NM_024753 79809 Hs.310672 NM_024753 ENSG00000123607 TTC21B ATD4|IFT139|IFT139B|JBTS11|NPHP12|Nbla10696|SRTD4|THM1 tetratricopeptide repeat domain 21B protein-coding chr3-5117 chr3 50374472 50374682 + 8.72 0.000 intron (NM_001174051, intron 22 of 38) intron (NM_001174051, intron 22 of 38) 9214 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr18-1013 chr18 54388930 54389140 + 8.72 0.000 Intergenic LTR41B|LTR|ERVL 31118 NR_110234 162681 Hs.208701 NM_173529 ENSG00000166845 C18orf54 LAS2 chromosome 18 open reading frame 54 protein-coding chr9-2456 chr9 21549305 21549515 + 8.72 0.000 intron (NR_152877, intron 1 of 3) intron (NR_152877, intron 1 of 3) 10388 NR_152877 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr17-3861 chr17 47057422 47057632 + 8.72 0.000 Intergenic LTR12C|LTR|ERV1 -78274 NM_203400 388394 Hs.367999 NM_203400 ENSG00000179673 RPRML - reprimo like protein-coding chr7-5723 chr7 71230624 71230834 + 8.72 0.000 intron (NM_022479, intron 1 of 10) intron (NM_022479, intron 1 of 10) -76945 NR_037479 100500920 NR_037479 ENSG00000283278 MIR3914-2 - microRNA 3914-2 ncRNA chr7-6762 chr7 13904253 13904463 + 8.72 0.000 intron (NM_001370555, intron 11 of 12) intron (NM_001370555, intron 11 of 12) 82156 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr17-3228 chr17 14201268 14201478 + 8.72 0.000 intron (NM_001303, intron 6 of 6) intron (NM_001303, intron 6 of 6) 35489 NM_001348781 146822 Hs.447556 NM_001007530 ENSG00000223510 CDRT15 - CMT1A duplicated region transcript 15 protein-coding chr2-12888 chr2 98589619 98589829 + 8.72 0.000 3' UTR (NM_004027, exon 26 of 26) 3' UTR (NM_004027, exon 26 of 26) 18788 NM_001008215 493753 Hs.596537 NM_001008215 ENSG00000183513 COA5 6330578E17Rik|C2orf64|CEMCOX3|Pet191 cytochrome c oxidase assembly factor 5 protein-coding chr4-6773 chr4 6625386 6625596 + 8.72 0.000 Intergenic Intergenic -14600 NM_001272053 93621 Hs.406590 NM_033296 ENSG00000179010 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding chrX-1153 chrX 41977318 41977528 + 8.72 0.000 Intergenic L2b|LINE|L2 -53869 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr4-3492 chr4 137203706 137203916 + 8.72 0.000 intron (NR_149105, intron 1 of 3) MLT1G3|LTR|ERVL-MaLR 8988 NR_149105 105377441 Hs.668386 NR_149105 LINC02511 - long intergenic non-protein coding RNA 2511 ncRNA chr14-3664 chr14 89767749 89767959 + 8.72 0.000 Intergenic Intergenic -148689 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr18-1985 chr18 39844476 39844686 + 8.72 0.000 intron (NR_151703, intron 1 of 8) MLT1A0|LTR|ERVL-MaLR 2872 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr14-2832 chr14 24992694 24992904 + 8.72 0.000 intron (NM_001351940, intron 1 of 6) intron (NM_001351940, intron 1 of 6) 56201 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr8-2762 chr8 116058351 116058561 + 8.72 0.000 intron (NR_046215, intron 7 of 13) intron (NR_046215, intron 7 of 13) 266603 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr11-6289 chr11 61010012 61010222 + 8.72 0.000 intron (NM_001254751, intron 5 of 10) intron (NM_001254751, intron 5 of 10) 38437 NM_001254751 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr6-6769 chr6 3566951 3567161 + 8.72 0.000 Intergenic MER77B|LTR|ERVL -110497 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr20-2166 chr20 44108638 44108848 + 8.72 0.000 Intergenic Intergenic 78445 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr7-6934 chr7 83123818 83124028 + 8.72 0.000 intron (NM_033026, intron 3 of 24) AluSx|SINE|Alu 38961 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr15-3411 chr15 89731220 89731430 + 8.72 0.000 intron (NM_001284395, intron 11 of 16) intron (NM_001284395, intron 11 of 16) 19984 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr15-4230 chr15 27421695 27421905 + 8.72 0.000 intron (NM_001270873, intron 5 of 5) intron (NM_001270873, intron 5 of 5) -260481 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr19-6271 chr19 7744513 7744723 + 8.72 0.000 intron (NR_026692, intron 4 of 5) MER63A|DNA|hAT-Blackjack 2916 NM_001144893 30835 Hs.278694 NM_021155 ENSG00000090659 CD209 CDSIGN|CLEC4L|DC-SIGN|DC-SIGN1 CD209 molecule protein-coding chr9-8100 chr9 98782768 98782978 + 8.72 0.000 intron (NM_173551, intron 4 of 14) AluJb|SINE|Alu 13682 NM_173551 203286 Hs.406890 NM_173551 ENSG00000165138 ANKS6 ANKRD14|NPHP16|PKDR1|SAMD6 ankyrin repeat and sterile alpha motif domain containing 6 protein-coding chr16-4925 chr16 89631713 89631923 + 8.72 0.000 intron (NM_004413, intron 2 of 10) AluSx3|SINE|Alu 11221 NM_004413 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr1-5031 chr1 84892748 84892958 + 8.72 0.000 intron (NM_012152, intron 1 of 2) CpG 353 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding chr14-2604 chr14 54471718 54471928 + 8.72 0.000 Intergenic Intergenic 17157 NM_004124 2764 Hs.151413 NM_004124 ENSG00000197045 GMFB GMF glia maturation factor beta protein-coding chr5-6049 chr5 176342984 176343194 + 8.72 0.000 intron (NM_001308200, intron 6 of 6) DNA1_Mam|DNA|TcMar 18675 NM_020444 57179 Hs.743257 NM_020444 ENSG00000122203 KIAA1191 p33MONOX|p60MONOX KIAA1191 protein-coding chr8-4075 chr8 66471371 66471581 + 8.72 0.000 Intergenic Intergenic -22090 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 VXN C8orf46 vexin protein-coding chr2-12223 chr2 43369662 43369872 + 8.72 0.000 intron (NM_001083953, intron 29 of 37) intron (NM_001083953, intron 29 of 37) 142556 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr1-16599 chr1 237057083 237057293 + 8.72 0.000 intron (NM_001035, intron 1 of 104) intron (NM_001035, intron 1 of 104) 15004 NM_001035 6262 Hs.109514 NM_001035 ENSG00000198626 RYR2 ARVC2|ARVD2|RYR-2|RyR|VTSIP ryanodine receptor 2 protein-coding chr17-4413 chr17 40199745 40199955 + 8.72 0.000 Intergenic AluJr|SINE|Alu 6253 NR_106927 102465523 NR_106927 ENSG00000274621 MIR6867 hsa-mir-6867 microRNA 6867 ncRNA chr20-2872 chr20 62698311 62698521 + 8.72 0.000 Intergenic Intergenic -10420 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr2-7104 chr2 177273841 177274051 + 8.72 0.000 Intergenic Intergenic -8815 NM_001313903 4780 Hs.744006 NM_006164 ENSG00000116044 NFE2L2 HEBP1|IMDDHH|NRF2 nuclear factor, erythroid 2 like 2 protein-coding chr3-9552 chr3 53384076 53384286 + 8.72 0.000 Intergenic MER46C|DNA|TcMar-Tigger -36638 NM_001290204 55802 Hs.476353 NM_018403 ENSG00000272886 DCP1A HSA275986|Nbla00360|SMAD4IP1|SMIF decapping mRNA 1A protein-coding chr3-6816 chr3 146159138 146159348 + 8.72 0.000 intron (NM_182943, intron 1 of 19) intron (NM_182943, intron 1 of 19) 1941 NM_182943 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr18-1325 chr18 75249592 75249802 + 8.72 0.000 intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 38168 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr2-9455 chr2 234581126 234581336 + 8.72 0.000 Intergenic Intergenic -84150 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr10-4135 chr10 77103690 77103900 + 8.72 0.000 intron (NM_001271519, intron 9 of 28) intron (NM_001271519, intron 9 of 28) -37036 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr7-5350 chr7 29480529 29480739 + 8.72 0.000 intron (NM_001293080, intron 1 of 5) intron (NM_001293080, intron 1 of 5) 922 NM_001293075 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr16-5663 chr16 68459811 68460021 + 8.72 0.000 Intergenic Intergenic -11408 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr3-10788 chr3 159082505 159082715 + 8.72 0.000 intron (NM_001197113, intron 1 of 10) intron (NM_001197113, intron 1 of 10) 13291 NM_001042706 654502 Hs.570685 NM_001042705 ENSG00000214216 IQCJ - IQ motif containing J protein-coding chr4-5346 chr4 184263000 184263210 + 8.72 0.000 Intergenic Intergenic -45232 NM_153343 133121 Hs.297814 NM_153343 ENSG00000164303 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding chr10-7552 chr10 15521398 15521608 + 8.72 0.000 intron (NM_001291494, intron 27 of 28) intron (NM_001291494, intron 27 of 28) -150214 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr18-1135 chr18 6384258 6384468 + 8.72 0.000 intron (NM_001365765, intron 1 of 18) L1ME4b|LINE|L1 -9938 NR_036205 100422840 NR_036205 ENSG00000283532 MIR4317 - microRNA 4317 ncRNA chr14-2917 chr14 39787040 39787250 + 8.72 0.000 Intergenic LTR16|LTR|ERVL -354645 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr14-2345 chr14 105420976 105421186 + 8.72 0.000 intron (NM_001203258, intron 1 of 20) intron (NM_001203258, intron 1 of 20) 1254 NM_001203258 9112 Hs.525629 NM_004689 ENSG00000182979 MTA1 - metastasis associated 1 protein-coding chr16-4929 chr16 89770673 89770883 + 8.72 0.000 intron (NM_000135, intron 23 of 42) intron (NM_000135, intron 23 of 42) 45869 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr2-5813 chr2 231632869 231633079 + 8.72 0.000 Intergenic Intergenic 40110 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr6-3696 chr6 164205209 164205419 + 8.72 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -533830 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr6-3430 chr6 124882853 124883063 + 8.72 0.000 Intergenic Intergenic -79587 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr9-3162 chr9 114283019 114283229 + 8.72 0.000 intron (NM_032888, intron 39 of 60) intron (NM_032888, intron 39 of 60) -39899 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr2-7479 chr2 16623720 16623930 + 8.72 0.000 intron (NM_030797, intron 2 of 11) intron (NM_030797, intron 2 of 11) 42009 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr2-9825 chr2 149422285 149422495 + 8.72 0.000 intron (NM_194317, intron 1 of 4) intron (NM_194317, intron 1 of 4) 91803 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr7-2416 chr7 80564172 80564382 + 8.72 0.000 Intergenic L1PA13|LINE|L1 -37930 NM_001371075 chr7-2518 chr7 44694069 44694279 + 8.72 0.000 intron (NM_002541, intron 11 of 22) intron (NM_002541, intron 11 of 22) -54392 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr3-7409 chr3 105411718 105411928 + 8.72 0.000 intron (NM_001243280, intron 1 of 14) intron (NM_001243280, intron 1 of 14) 44914 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr1-7030 chr1 173669583 173669793 + 8.72 0.000 intron (NM_198493, intron 1 of 5) CpG 163 NR_158771 339416 Hs.130054 NM_198493 ENSG00000183831 ANKRD45 CT117 ankyrin repeat domain 45 protein-coding chr9-6729 chr9 10029228 10029438 + 8.72 0.000 intron (NM_002839, intron 4 of 45) THE1B-int|LTR|ERVL-MaLR 229941 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr1-11986 chr1 88383773 88383983 + 8.72 0.000 Intergenic L1MEh|LINE|L1 -300266 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr2-8242 chr2 98123477 98123687 + 8.72 0.000 intron (NR_144298, intron 5 of 15) intron (NR_144298, intron 5 of 15) -25951 NM_001345864 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr5-5712 chr5 167798690 167798900 + 8.72 0.000 intron (NM_001080428, intron 1 of 24) intron (NM_001080428, intron 1 of 24) 43866 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr11-4465 chr11 103851429 103851639 + 8.72 0.000 Intergenic Intergenic 1628 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr9-6717 chr9 5784186 5784396 + 8.72 0.000 TTS (NM_024896) TTS (NM_024896) 48826 NM_024896 79956 Hs.591078 NM_024896 ENSG00000099219 ERMP1 FXNA|KIAA1815|bA207C16.3 endoplasmic reticulum metallopeptidase 1 protein-coding chr1-7409 chr1 37850651 37850861 + 8.72 0.000 intron (NM_005955, intron 2 of 10) intron (NM_005955, intron 2 of 10) 8836 NM_005955 4520 Hs.471991 NM_005955 ENSG00000188786 MTF1 MTF-1|ZRF metal regulatory transcription factor 1 protein-coding chr8-2600 chr8 54275430 54275640 + 8.72 0.000 Intergenic L1MC3|LINE|L1 -55151 NR_004385 26766 NR_004385 ENSG00000199212 RNU105C E1-5|E1-6 RNA, U105C small nucleolar snoRNA chr18-2205 chr18 63410899 63411109 + 8.72 0.000 intron (NM_004869, intron 2 of 10) intron (NM_004869, intron 2 of 10) 11472 NM_004869 9525 Hs.126550 NM_004869 ENSG00000119541 VPS4B MIG1|SKD1|SKD1B|VPS4-2 vacuolar protein sorting 4 homolog B protein-coding chr9-6144 chr9 35771114 35771324 + 8.72 0.000 Intergenic Intergenic -16943 NM_001044264 692094 Hs.571601 NM_001044264 ENSG00000215183 MSMP PSMP microseminoprotein, prostate associated protein-coding chr17-4817 chr17 52001002 52001212 + 8.72 0.000 intron (NM_001082533, intron 3 of 9) intron (NM_001082533, intron 3 of 9) 157607 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr17-6335 chr17 67246698 67246908 + 8.72 0.000 intron (NR_136398, intron 1 of 3) intron (NR_136398, intron 1 of 3) -1607 NM_001330447 9931 Hs.370140 NM_014877 ENSG00000198265 HELZ DHRC|DRHC|HUMORF5 helicase with zinc finger protein-coding chr22-3176 chr22 30741189 30741399 + 8.72 0.000 exon (NM_001282739, exon 2 of 14) exon (NM_001282739, exon 2 of 14) 9737 NR_036171 100422912 NR_036171 ENSG00000264661 MIR3200 mir-3200 microRNA 3200 ncRNA chr2-8488 chr2 127227094 127227304 + 8.72 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -6900 NM_001367501 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding KI270736.1-10 KI270736.1 156334 156544 + 8.72 0.000 NA NA NA NA chr11-5775 chr11 4519305 4519515 + 8.72 0.000 Intergenic Intergenic -25781 NM_001004137 119772 Hs.553567 NM_001004137 ENSG00000197790 OR52M1 OR11-11|OR52M1P|OR52M3P olfactory receptor family 52 subfamily M member 1 protein-coding chr4-4642 chr4 81212089 81212299 + 8.72 0.000 intron (NM_006259, intron 1 of 18) Helitron3Na_Mam|RC|Helitron 2923 NM_006259 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding chr5-3694 chr5 1763812 1764022 + 8.72 0.000 Intergenic Intergenic 35920 NM_032479 64979 Hs.719465 NM_032479 ENSG00000171421 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding chr10-7659 chr10 26805694 26805904 + 8.72 0.000 intron (NM_001012752, intron 2 of 9) intron (NM_001012752, intron 2 of 9) 55288 NM_001178124 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr5-9000 chr5 164984857 164985067 + 8.72 0.000 Intergenic MER5B|DNA|hAT-Charlie 514683 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr2-7664 chr2 28951727 28951937 + 8.72 0.000 Intergenic Intergenic 23849 NR_145755 109617012 NR_145755 ENSG00000265706 SNORD53B - small nucleolar RNA, C/D box 53B snoRNA chr10-4173 chr10 96397332 96397542 + 8.72 0.000 intron (NM_012465, intron 10 of 20) intron (NM_012465, intron 10 of 20) -38072 NM_001284322 93377 Hs.12449 NM_033207 ENSG00000197430 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding chr20-2832 chr20 59850061 59850271 + 8.72 0.000 Intergenic Intergenic 83471 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding chr11-10720 chr11 131233614 131233824 + 8.72 0.000 Intergenic Intergenic -136896 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr5-3196 chr5 79576835 79577045 + 8.72 0.000 Intergenic LTR23|LTR|ERV1 -35477 NM_001114394 167153 Hs.418198 NM_173797 ENSG00000164329 TENT2 APD4|GLD2|PAPD4|TUT2 terminal nucleotidyltransferase 2 protein-coding chr7-8149 chr7 28864079 28864289 + 8.72 0.000 Intergenic Intergenic 94146 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr8-4228 chr8 87695150 87695360 + 8.72 0.000 Intergenic Intergenic 178760 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr5-3456 chr5 160980800 160981010 + 8.72 0.000 Intergenic MER41-int|LTR|ERV1 -42279 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr6-2103 chr6 159074320 159074530 + 8.72 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -29273 NM_152133 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chr6-6679 chr6 166072589 166072799 + 8.72 0.000 Intergenic Intergenic -25026 NR_147704 729681 Hs.520550 NR_147704 LOC729681 - uncharacterized LOC729681 ncRNA chr13-3539 chr13 23911502 23911712 + 8.72 0.000 intron (NR_073430, intron 3 of 4) intron (NR_073430, intron 3 of 4) -14105 NR_104426 387911 Hs.740810 NM_001007537 ENSG00000205863 C1QTNF9B CTRP9B C1q and TNF related 9B protein-coding chr7-8408 chr7 45658553 45658763 + 8.72 0.000 intron (NM_001281768, intron 7 of 9) intron (NM_001281768, intron 7 of 9) 84290 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr10-3204 chr10 100529723 100529933 + 8.72 0.000 promoter-TSS (NM_001284367) promoter-TSS (NM_001284367) 43 NM_005004 4714 Hs.523215 NM_005004 ENSG00000166136 NDUFB8 ASHI|CI-ASHI|MC1DN32 NADH:ubiquinone oxidoreductase subunit B8 protein-coding chr9-7695 chr9 72069769 72069979 + 8.72 0.000 Intergenic AluSc|SINE|Alu -9269 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding chr7-6816 chr7 33763140 33763350 + 8.72 0.000 Intergenic Intergenic -141670 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr12-4709 chr12 49798421 49798631 + 8.72 0.000 intron (NM_001037806, intron 6 of 12) intron (NM_001037806, intron 6 of 12) 29887 NM_001368048 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L Cep169|FP1193|KIAA1602 NCK associated protein 5 like protein-coding chr20-2348 chr20 14218221 14218431 + 8.72 0.000 intron (NM_001351663, intron 3 of 17) L1PBa1|LINE|L1 119286 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chrX-1323 chrX 132120015 132120225 + 8.72 0.000 intron (NM_194277, intron 1 of 11) intron (NM_194277, intron 1 of 11) 7900 NM_001306193 90167 Hs.170776 NM_194277 ENSG00000165694 FRMD7 NYS|NYS1|XIPAN FERM domain containing 7 protein-coding chr15-4036 chr15 62559970 62560180 + 8.72 0.000 Intergenic Intergenic 85106 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr11-10236 chr11 100022193 100022403 + 8.72 0.000 intron (NM_001243270, intron 8 of 23) L1ME1|LINE|L1 466153 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr11-6894 chr11 104705545 104705755 + 8.72 0.000 Intergenic Intergenic -96348 NR_120585 102723895 Hs.48803 NR_120585 ENSG00000256422 LINC02552 - long intergenic non-protein coding RNA 2552 ncRNA chr10-5816 chr10 110159773 110159983 + 8.72 0.000 Intergenic L1MB8|LINE|L1 -47727 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr18-2008 chr18 42311543 42311753 + 8.72 0.000 intron (NR_046457, intron 4 of 6) AmnSINE1|SINE|5S-Deu-L2 124980 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr5-7497 chr5 35182989 35183199 + 8.72 0.000 intron (NM_000949, intron 1 of 9) L3|LINE|CR1 47393 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr2-9357 chr2 227473835 227474045 + 8.72 0.000 intron (NM_004504, intron 1 of 12) L2c|LINE|L2 1768 NM_004504 3267 Hs.352962 NM_004504 ENSG00000173744 AGFG1 HRB|RAB|RIP ArfGAP with FG repeats 1 protein-coding chr15-1961 chr15 38373109 38373319 + 8.72 0.000 Intergenic L2a|LINE|L2 -80913 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr8-2466 chr8 130591400 130591610 + 8.72 0.000 Intergenic L2c|LINE|L2 -147831 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr7-5624 chr7 53811956 53812166 + 8.72 0.000 promoter-TSS (NR_038371) promoter-TSS (NR_038371) -130 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr5-6263 chr5 96789851 96790061 + 8.72 0.000 intron (NM_001198541, intron 10 of 18) intron (NM_001198541, intron 10 of 18) 17989 NM_001040458 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr20-790 chr20 58981009 58981219 + 8.72 0.000 promoter-TSS (NM_198976) promoter-TSS (NM_198976) -142 NM_198976 51497 Hs.517148 NM_016397 ENSG00000101158 NELFCD HSPC130|NELF-C|NELF-D|TH1|TH1L negative elongation factor complex member C/D protein-coding chr2-11749 chr2 11357913 11358123 + 8.72 0.000 Intergenic Intergenic -12581 NM_001321643 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr1-8546 chr1 162276627 162276837 + 8.72 0.000 intron (NM_014697, intron 2 of 9) intron (NM_014697, intron 2 of 9) -65814 NR_030283 693141 NR_030283 ENSG00000207729 MIR556 MIRN556|hsa-mir-556|mir-556 microRNA 556 ncRNA chr12-5105 chr12 96234693 96234903 + 8.72 0.000 intron (NM_005230, intron 2 of 4) MIRb|SINE|MIR -20700 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr2-8358 chr2 109493844 109494054 + 8.72 0.000 intron (NM_001099289, intron 9 of 9) intron (NM_001099289, intron 9 of 9) 119718 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr2-9011 chr2 196233094 196233304 + 8.72 0.000 intron (NM_020760, intron 21 of 28) intron (NM_020760, intron 21 of 28) -26825 NR_110225 101927482 Hs.191841 NR_110225 HECW2-AS1 - HECW2 antisense RNA 1 ncRNA chr14-3807 chr14 67538212 67538422 + 8.72 0.000 intron (NM_020715, intron 1 of 28) MIRc|SINE|MIR -4467 NM_001348546 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr1-13995 chr1 25767254 25767464 + 8.72 0.000 intron (NM_020379, intron 7 of 11) (CA)n|Simple_repeat|Simple_repeat -32834 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr5-7729 chr5 59313249 59313459 + 8.72 0.000 intron (NM_001165899, intron 3 of 16) MER50-int|LTR|ERV1 -37239 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr6-1741 chr6 44010885 44011095 + 8.72 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) -7340 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr2-4674 chr2 207074419 207074629 + 8.72 0.000 non-coding (NR_073108, exon 5 of 5) non-coding (NR_073108, exon 5 of 5) 35549 NR_036227 100423036 NR_036227 ENSG00000253008 MIR2355 mir-2355 microRNA 2355 ncRNA chr12-1993 chr12 132417631 132417841 + 8.72 0.000 Intergenic (CCGCCTC)n|Simple_repeat|Simple_repeat -72415 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr3-10956 chr3 176802076 176802286 + 8.72 0.000 Intergenic L1PREC2|LINE|L1 14820 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr20-2861 chr20 62466868 62467078 + 8.72 0.000 intron (NM_080473, intron 3 of 6) intron (NM_080473, intron 3 of 6) 9022 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr14-4578 chr14 49381206 49381416 + 8.72 0.000 Intergenic Intergenic 205069 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr11-5805 chr11 6421949 6422159 + 8.72 0.000 Intergenic AluY|SINE|Alu -2601 NM_145689 322 Hs.372840 NM_001164 ENSG00000166313 APBB1 FE65|MGC:9072|RIR amyloid beta precursor protein binding family B member 1 protein-coding chr15-2547 chr15 46756167 46756377 + 8.72 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -427817 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr4-1178 chr4 3866054 3866264 + 8.72 0.000 Intergenic Intergenic 89269 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr13-1392 chr13 113114809 113115019 + 8.72 0.000 intron (NR_051961, intron 3 of 6) intron (NR_051961, intron 3 of 6) -7885 NM_001312674 2159 Hs.361463 NM_000504 ENSG00000126218 F10 FX|FXA coagulation factor X protein-coding chr13-2180 chr13 19088062 19088272 + 8.72 0.000 intron (NR_146902, intron 4 of 4) intron (NR_146902, intron 4 of 4) 30116 NR_146902 107984132 Hs.614937 NR_146902 LOC107984132 - uncharacterized LOC107984132 ncRNA chr3-10039 chr3 103989999 103990209 + 8.72 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -465988 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr1-16278 chr1 213252163 213252373 + 8.72 0.000 intron (NM_001136138, intron 11 of 13) intron (NM_001136138, intron 11 of 13) 201027 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr7-7276 chr7 33671531 33671741 + 8.72 0.000 Intergenic Intergenic -233279 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr18-3375 chr18 58955578 58955788 + 8.72 0.000 intron (NR_148459, intron 9 of 11) intron (NR_148459, intron 9 of 11) -79996 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr17-6853 chr17 20293745 20293955 + 8.72 0.000 intron (NM_001033553, intron 12 of 14) intron (NM_001033553, intron 12 of 14) -27324 NR_023380 348254 Hs.462475 NR_023380 CCDC144CP CCDC144C coiled-coil domain containing 144C, pseudogene pseudo chr1-8536 chr1 157732691 157732901 + 8.72 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -32027 NR_135214 115352 Hs.292449 NM_052939 ENSG00000160856 FCRL3 CD307c|FCRH3|IFGP3|IRTA3|SPAP2 Fc receptor like 3 protein-coding chr2-10085 chr2 47270891 47271101 + 8.72 0.000 intron (NR_110207, intron 1 of 2) AluSq|SINE|Alu -64319 NR_001568 618 NR_001568 ENSG00000236824 BCYRN1 BC200|BC200a|LINC00004|NCRNA00004 brain cytoplasmic RNA 1 ncRNA chr20-1636 chr20 18904560 18904770 + 8.72 0.000 Intergenic Intergenic -74462 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr6-4946 chr6 101645310 101645520 + 8.72 0.000 intron (NM_001166247, intron 3 of 16) intron (NM_001166247, intron 3 of 16) 246430 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr16-4351 chr16 31533015 31533225 + 8.72 0.000 Intergenic MER96|DNA|hAT-Tip100 5143 NM_001318222 51327 Hs.274309 NM_016633 ENSG00000169877 AHSP EDRF|ERAF alpha hemoglobin stabilizing protein protein-coding chr10-3679 chr10 103080141 103080351 + 8.72 0.000 3' UTR (NM_017649, exon 8 of 8) 3' UTR (NM_017649, exon 8 of 8) 73575 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr19-3340 chr19 7805589 7805799 + 8.72 0.000 Intergenic L1M4|LINE|L1 18210 NR_002931 440508 Hs.568222 NR_002931 CLEC4GP1 - C-type lectin domain family 4 member G pseudogene 1 pseudo chr12-5380 chr12 120195443 120195653 + 8.72 0.000 promoter-TSS (NM_006836) promoter-TSS (NM_006836) -833 NM_006836 10985 Hs.298716 NM_006836 ENSG00000089154 GCN1 GCN1L|GCN1L1|PRIC295 GCN1 activator of EIF2AK4 protein-coding chr2-9940 chr2 240664371 240664581 + 8.72 0.000 Intergenic L1MC3|LINE|L1 18409 NM_001102467 653437 Hs.437167 NM_001102467 ENSG00000185176 AQP12B INSSA3 aquaporin 12B protein-coding chr22-3750 chr22 26912117 26912327 + 8.72 0.000 intron (NR_110540, intron 2 of 2) MIRb|SINE|MIR 8930 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA chr2-6293 chr2 58287395 58287605 + 8.72 0.000 intron (NR_147010, intron 1 of 2) intron (NR_147010, intron 1 of 2) 11623 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA chr14-4348 chr14 23416502 23416712 + 8.72 0.000 intron (NM_000257, intron 33 of 39) intron (NM_000257, intron 33 of 39) 1157 NR_126491 104564225 NR_126491 MHRT Myheart myosin heavy chain associated RNA transcript ncRNA chr5-9127 chr5 174777689 174777899 + 8.72 0.000 Intergenic LTR37B|LTR|ERV1 26060 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr12-3885 chr12 117058366 117058576 + 8.72 0.000 intron (NR_031766, intron 2 of 7) L1MB8|LINE|L1 40945 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr4-7540 chr4 76733779 76733989 + 8.72 0.000 intron (NM_020859, intron 4 of 10) intron (NM_020859, intron 4 of 10) 158333 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr7-959 chr7 516951 517161 + 8.72 0.000 intron (NM_002607, intron 2 of 6) CpG 2788 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr14-4727 chr14 60303706 60303916 + 8.72 0.000 Intergenic Intergenic -19385 NR_146481 101927729 NR_146481 ENSG00000258556 LINC02322 - long intergenic non-protein coding RNA 2322 ncRNA chr8-5877 chr8 15235987 15236197 + 8.72 0.000 intron (NM_139167, intron 1 of 7) intron (NM_139167, intron 1 of 7) 2339 NM_001322880 137868 Hs.545526 NM_139167 ENSG00000185053 SGCZ ZSG1 sarcoglycan zeta protein-coding chr14-1715 chr14 22921856 22922066 + 8.72 0.000 intron (NR_120600, intron 1 of 1) L2b|LINE|L2 2505 NR_120600 100505758 Hs.655707 NR_120599 ENSG00000237054 PRMT5-AS1 - PRMT5 antisense RNA 1 ncRNA chrX-1979 chrX 11196552 11196762 + 8.72 0.000 intron (NM_001287242, intron 3 of 12) MamSINE1|SINE|tRNA-RTE 69335 NM_013423 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr9-3518 chr9 33457826 33458036 + 8.72 0.000 Intergenic AluSx1|SINE|Alu 10004 NR_106910 102465512 NR_106910 ENSG00000275651 MIR6851 hsa-mir-6851 microRNA 6851 ncRNA chr16-4854 chr16 88111476 88111686 + 8.72 0.000 Intergenic L1MA2|LINE|L1 -10596 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr1-13340 chr1 246094410 246094620 + 8.72 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 322897 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr11-7276 chr11 32829769 32829979 + 8.72 0.000 promoter-TSS (NM_024081) promoter-TSS (NM_024081) -53 NM_024081 79056 Hs.471695 NM_024081 ENSG00000135378 PRRG4 PRGP4|TMG4 proline rich and Gla domain 4 protein-coding chr3-10133 chr3 113773490 113773700 + 8.72 0.000 intron (NM_001690, intron 1 of 14) Charlie21a|DNA|hAT-Charlie 26560 NM_001690 523 Hs.477155 NM_001690 ENSG00000114573 ATP6V1A ARCL2D|ATP6A1|ATP6V1A1|HO68|IECEE3|VA68|VPP2|Vma1 ATPase H+ transporting V1 subunit A protein-coding chr11-2874 chr11 34274762 34274972 + 8.72 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 83143 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr6-5113 chr6 120229969 120230179 + 8.72 0.000 Intergenic L1M2|LINE|L1 214895 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr7-7196 chr7 13304420 13304630 + 8.72 0.000 Intergenic Intergenic 616892 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr3-8997 chr3 18003070 18003280 + 8.72 0.000 intron (NR_161333, intron 1 of 4) L1PA4|LINE|L1 40623 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr21-900 chr21 17905541 17905751 + 8.72 0.000 Intergenic Intergenic -11694 NM_001204178 140578 Hs.283725 NM_024944 ENSG00000154645 CHODL C21orf68|MT75|PRED12 chondrolectin protein-coding chr2-12616 chr2 71854059 71854269 + 8.72 0.000 Intergenic Intergenic 293698 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr19-4456 chr19 4947457 4947667 + 8.72 0.000 intron (NM_001290051, intron 11 of 16) AluSz6|SINE|Alu 14875 NR_039902 100616337 NR_039902 ENSG00000263409 MIR4747 mir-4747 microRNA 4747 ncRNA chr11-4842 chr11 16862071 16862281 + 8.72 0.000 intron (NM_001329630, intron 4 of 26) intron (NM_001329630, intron 4 of 26) 63846 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr2-13451 chr2 145007296 145007506 + 8.72 0.000 intron (NR_033870, intron 3 of 4) MER130|DNA|DNA 339434 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr3-6853 chr3 149717496 149717706 + 8.72 0.000 intron (NM_001348362, intron 2 of 9) intron (NM_001348362, intron 2 of 9) 7187 NM_001348362 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr9-6728 chr9 9625010 9625220 + 8.72 0.000 intron (NM_002839, intron 7 of 45) intron (NM_002839, intron 7 of 45) -174277 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr16-4529 chr16 63049248 63049458 + 8.72 0.000 Intergenic Intergenic -1012915 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr14-2715 chr14 90819865 90820075 + 8.72 0.000 Intergenic Intergenic -3540 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr5-5032 chr5 86674020 86674230 + 8.72 0.000 Intergenic L1MA3|LINE|L1 53619 NR_145802 109623460 NR_037402 SNORD138 MIR3607|mir-3607 small nucleolar RNA, C/D box 138 snoRNA chr17-7074 chr17 65985523 65985733 + 8.72 0.000 intron (NM_001353129, intron 17 of 26) Tigger10|DNA|TcMar-Tigger -159085 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr11-5094 chr11 117720126 117720336 + 8.72 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 76985 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr6-3667 chr6 148179864 148180074 + 8.72 0.000 Intergenic Intergenic -92359 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chrX-3752 chrX 127764589 127764799 + 8.72 0.000 Intergenic Intergenic 287709 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr5-5322 chr5 127916844 127917054 + 8.72 0.000 intron (NM_001317938, intron 6 of 6) Tigger1|DNA|TcMar-Tigger 166226 NR_152811 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA chr3-10065 chr3 107484670 107484880 + 8.72 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -38187 NM_020235 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr11-5162 chr11 3600091 3600301 + 8.72 0.000 Intergenic Intergenic -26264 NR_002720 7221 Hs.131910 NR_002720 ENSG00000182048 TRPC2 - transient receptor potential cation channel subfamily C member 2 (pseudogene) pseudo chr4-6919 chr4 16010526 16010736 + 8.72 0.000 intron (NM_001371408, intron 10 of 24) AluJb|SINE|Alu -47456 NM_031950 83888 Hs.98785 NM_031950 ENSG00000137441 FGFBP2 HBP17RP|KSP37 fibroblast growth factor binding protein 2 protein-coding chr2-4589 chr2 101719432 101719642 + 8.72 0.000 intron (NM_145686, intron 2 of 30) intron (NM_145686, intron 2 of 30) 21830 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr12-3520 chr12 131290556 131290766 + 8.72 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 7311 NR_135045 107161159 Hs.730119 NR_135045 ENSG00000248703 LINC02415 - long intergenic non-protein coding RNA 2415 ncRNA chr13-3953 chr13 61125220 61125430 + 8.72 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 74555 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr3-10350 chr3 127851094 127851304 + 8.72 0.000 Intergenic L1MC4|LINE|L1 -27949 NM_001003794 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr2-6197 chr2 15528654 15528864 + 8.72 0.000 intron (NR_052013, intron 9 of 50) AluSx1|SINE|Alu 32575 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr8-3429 chr8 76673529 76673739 + 8.72 0.000 intron (NR_024360, intron 1 of 3) intron (NR_024360, intron 1 of 3) -7613 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr1-9480 chr1 36589381 36589591 + 8.72 0.000 Intergenic MIR|SINE|MIR -106172 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr2-7457 chr2 14516883 14517093 + 8.72 0.000 Intergenic Intergenic -115729 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr15-5215 chr15 96333489 96333699 + 8.72 0.000 promoter-TSS (NM_001145157) promoter-TSS (NM_001145157) -171 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr6-1627 chr6 96837244 96837454 + 8.72 0.000 5' UTR (NM_001143957, exon 1 of 3) 5' UTR (NM_001143957, exon 1 of 3) 128 NM_001143957 81491 Hs.221364 NM_030784 ENSG00000112218 GPR63 PSP24(beta)|PSP24B G protein-coupled receptor 63 protein-coding chr12-4880 chr12 63917913 63918123 + 8.72 0.000 intron (NM_001346201, intron 1 of 21) MamGypsy2-I|LTR|Gypsy 73318 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr2-5641 chr2 191721527 191721737 + 8.72 0.000 Intergenic Intergenic 31451 NR_131917 105747689 Hs.104972 NR_131917 LOC105747689 - uncharacterized LOC105747689 ncRNA chr4-7147 chr4 38431327 38431537 + 8.72 0.000 intron (NR_110951, intron 6 of 7) intron (NR_110951, intron 6 of 7) 64518 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr19-4650 chr19 16238268 16238478 + 8.72 0.000 3' UTR (NM_001130524, exon 13 of 13) 3' UTR (NM_001130524, exon 13 of 13) 40462 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr2-9589 chr2 241112839 241113049 + 8.72 0.000 TTS (NM_001252124) TTS (NM_001252124) -10612 NR_028051 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr9-6993 chr9 112667987 112668197 + 8.72 0.000 3' UTR (NM_133465, exon 4 of 4) 3' UTR (NM_133465, exon 4 of 4) 50025 NR_138054 58493 Hs.658575 NM_021218 ENSG00000148153 INIP C9orf80|HSPC043|MISE|SOSSC|SSBIP1|hSSBIP1 INTS3 and NABP interacting protein protein-coding chr12-5914 chr12 64876212 64876422 + 8.72 0.000 3' UTR (NM_015279, exon 12 of 12) 3' UTR (NM_015279, exon 12 of 12) -7457 NR_033988 400046 Hs.591032 NR_033988 ENSG00000255693 LINC02389 - long intergenic non-protein coding RNA 2389 ncRNA chr17-8188 chr17 62304866 62305076 + 8.72 0.000 Intergenic L1MEh|LINE|L1 -29316 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr11-6374 chr11 64539191 64539401 + 8.72 0.000 Intergenic Intergenic -16645 NM_018484 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr10-1976 chr10 32923892 32924102 + 8.72 0.000 intron (NM_002211, intron 6 of 15) intron (NM_002211, intron 6 of 15) 11561 NM_033668 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chrX-4544 chrX 68925873 68926083 + 8.72 0.000 Intergenic MER20|DNA|hAT-Charlie 96981 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr20-1076 chr20 34561120 34561330 + 8.72 0.000 TTS (NM_032514) TTS (NM_032514) 2507 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr3-4653 chr3 36763992 36764202 + 8.72 0.000 Intergenic CpG -24236 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr12-5136 chr12 98858418 98858628 + 8.72 0.000 intron (NM_152788, intron 17 of 25) AluJb|SINE|Alu 36251 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr12-4963 chr12 75452944 75453154 + 8.72 0.000 Intergenic L1MC1|LINE|L1 -27706 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr6-6182 chr6 11224874 11225084 + 8.72 0.000 intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) 7689 NM_006403 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr10-3277 chr10 129653371 129653581 + 8.72 0.000 intron (NM_002412, intron 2 of 4) intron (NM_002412, intron 2 of 4) 186235 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr1-12784 chr1 79599645 79599855 + 8.72 0.000 Intergenic Intergenic -593020 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr16-4856 chr16 88205889 88206099 + 8.72 0.000 Intergenic Intergenic 11713 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr10-5166 chr10 57469775 57469985 + 8.72 0.000 Intergenic Intergenic -165321 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr17-7683 chr17 31048740 31048950 + 8.72 0.000 intron (NR_146737, intron 2 of 6) intron (NR_146737, intron 2 of 6) 10264 NR_146737 646030 NR_146737 LOC646030 - leucine rich repeat containing 37B pseudogene pseudo chr4-2684 chr4 2035032 2035242 + 8.72 0.000 Intergenic PRIMA41-int|LTR|ERV1 -6856 NM_001168243 401115 Hs.446474 NM_001141936 ENSG00000243449 C4orf48 CHR4_55 chromosome 4 open reading frame 48 protein-coding chr9-7479 chr9 28890195 28890405 + 8.72 0.000 intron (NM_001354574, intron 2 of 5) intron (NM_001354574, intron 2 of 5) -1345 NR_030618 100126316 NR_030618 ENSG00000215939 MIR873 MIRN873|hsa-mir-873|mir-873 microRNA 873 ncRNA chr7-5567 chr7 47337717 47337927 + 8.72 0.000 intron (NM_022748, intron 20 of 30) intron (NM_022748, intron 20 of 30) 126981 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr9-2685 chr9 72966297 72966507 + 8.72 0.000 Intergenic AluSx1|SINE|Alu -13349 NM_000689 216 Hs.76392 NM_000689 ENSG00000165092 ALDH1A1 ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 aldehyde dehydrogenase 1 family member A1 protein-coding chr3-6965 chr3 164402437 164402647 + 8.72 0.000 Intergenic L2b|LINE|L2 -230986 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr17-4443 chr17 48728099 48728309 + 8.72 0.000 exon (NM_006361, exon 1 of 2) exon (NM_006361, exon 1 of 2) 545 NM_006361 10481 Hs.66731 NM_006361 ENSG00000159184 HOXB13 HPC9|PSGD homeobox B13 protein-coding chr14-2387 chr14 48777346 48777556 + 8.72 0.000 Intergenic MSTA|LTR|ERVL-MaLR 808929 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr19-4221 chr19 47788850 47789060 + 8.72 0.000 Intergenic Intergenic 10252 NM_003009 6415 Hs.631549 NM_003009 ENSG00000178980 SELENOW SEPW1|selW selenoprotein W protein-coding chr8-3866 chr8 37293412 37293622 + 8.72 0.000 Intergenic Intergenic 200396 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr1-5479 chr1 112505499 112505709 + 8.72 0.000 intron (NM_004185, intron 2 of 5) intron (NM_004185, intron 2 of 5) -3361 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr10-5799 chr10 107186952 107187162 + 8.72 0.000 Intergenic L1MD1|LINE|L1 -22351 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr2-14050 chr2 195660380 195660590 + 8.72 0.000 intron (NM_020342, intron 1 of 9) intron (NM_020342, intron 1 of 9) 3259 NM_020342 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr1-10330 chr1 152847230 152847440 + 8.72 0.000 Intergenic Intergenic 4479 NM_001128600 448835 Hs.62927 NM_001128600 ENSG00000235942 LCE6A C1orf44 late cornified envelope 6A protein-coding chr13-1049 chr13 102394557 102394767 + 8.72 0.000 promoter-TSS (NR_036486) promoter-TSS (NR_036486) 84 NR_036487 283481 Hs.646604 NR_036487 ENSG00000272143 FGF14-AS2 - FGF14 antisense RNA 2 ncRNA chr2-4366 chr2 19369475 19369685 + 8.72 0.000 Intergenic Intergenic -10957 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr1-6052 chr1 86423538 86423748 + 8.72 0.000 promoter-TSS (NM_006536) promoter-TSS (NM_006536) -528 NM_006536 9635 Hs.241551 NM_006536 ENSG00000137975 CLCA2 CACC|CACC3|CLCRG2|CaCC-3 chloride channel accessory 2 protein-coding chr17-7882 chr17 43094510 43094720 + 8.72 0.000 exon (NM_007300, exon 10 of 24) exon (NM_007300, exon 10 of 24) 29500 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr18-3505 chr18 74125735 74125945 + 8.72 0.000 intron (NM_001142958, intron 6 of 9) intron (NM_001142958, intron 6 of 9) 21994 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr4-1761 chr4 162164016 162164226 + 8.72 0.000 promoter-TSS (NM_001128427) promoter-TSS (NM_001128427) -87 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chrX-4999 chrX 118258893 118259103 + 8.72 0.000 Intergenic Intergenic -87075 NM_001184966 54521 Hs.98510 NM_019045 ENSG00000131725 WDR44 RAB11BP|RPH11|SYM-4 WD repeat domain 44 protein-coding chr10-6077 chr10 130780520 130780730 + 8.72 0.000 Intergenic Intergenic 182043 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr13-1042 chr13 85659738 85659948 + 8.72 0.000 Intergenic L2a|LINE|L2 139576 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr11-5232 chr11 20125963 20126173 + 8.72 0.000 Intergenic LTR16C|LTR|ERVL 34407 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr6-1448 chr6 163444088 163444298 + 8.72 0.000 intron (NM_206853, intron 1 of 6) intron (NM_206853, intron 1 of 6) 29475 NM_006775 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr1-13658 chr1 10992726 10992936 + 8.72 0.000 Intergenic LTR84b|LTR|ERVL -10794 NM_001170754 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr8-5955 chr8 20378387 20378597 + 8.72 0.000 Intergenic THE1D|LTR|ERVL-MaLR -74529 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr5-4641 chr5 34996090 34996300 + 8.72 0.000 Intergenic MIRc|SINE|MIR 51754 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr7-9484 chr7 136091311 136091521 + 8.72 0.000 Intergenic Intergenic -114057 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr3-4427 chr3 12891916 12892126 + 8.72 0.000 Intergenic L1MC4|LINE|L1 -6810 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chrX-700 chrX 70664769 70664979 + 8.72 0.000 intron (NM_001003811, intron 17 of 30) intron (NM_001003811, intron 17 of 30) 181421 NR_145758 109617015 NR_145758 ENSG00000280704 SNORD3E - small nucleolar RNA, C/D box 3E snoRNA chr12-3542 chr12 132678519 132678729 + 8.72 0.000 intron (NM_006231, intron 6 of 48) intron (NM_006231, intron 6 of 48) 8900 NM_006231 5426 Hs.524871 NM_006231 ENSG00000177084 POLE CRCS12|FILS|IMAGEI|POLE1 DNA polymerase epsilon, catalytic subunit protein-coding chr1-6660 chr1 47865825 47866035 + 8.72 0.000 intron (NM_001194986, intron 2 of 6) MIRb|SINE|MIR 131455 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr15-2891 chr15 42388788 42388998 + 8.72 0.000 intron (NM_000070, intron 4 of 23) intron (NM_000070, intron 4 of 23) -13497 NM_173088 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr5-3588 chr5 88883613 88883823 + 8.72 0.000 promoter-TSS (NM_001364347) promoter-TSS (NM_001364347) 388 NR_109941 101929423 Hs.130138 NR_104031 ENSG00000248309 MEF2C-AS1 - MEF2C antisense RNA 1 ncRNA chr16-6728 chr16 73247579 73247789 + 8.72 0.000 Intergenic (TGTGTA)n|Simple_repeat|Simple_repeat -103237 NM_207385 388289 Hs.371893 NM_207385 C16orf47 - chromosome 16 open reading frame 47 protein-coding chr8-4212 chr8 85959732 85959942 + 8.72 0.000 Intergenic Intergenic 109831 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr14-1629 chr14 103731325 103731535 + 8.72 0.000 intron (NM_001198953, intron 6 of 7) AluSp|SINE|Alu 15686 NM_024071 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr6-7895 chr6 108129426 108129636 + 8.72 0.000 intron (NR_145458, intron 1 of 1) intron (NR_145458, intron 1 of 1) 5898 NR_145458 100287366 Hs.221513 NR_145458 ENSG00000225174 OSTM1-AS1 - OSTM1 antisense RNA 1 ncRNA chr8-4232 chr8 88553790 88554000 + 8.72 0.000 Intergenic (ATGCT)n|Simple_repeat|Simple_repeat -226412 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr17-5059 chr17 2916534 2916744 + 8.72 0.000 intron (NM_001330058, intron 3 of 24) MIRb|SINE|MIR 49256 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr5-2467 chr5 138603469 138603679 + 8.72 0.000 Intergenic Intergenic -28173 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr3-3344 chr3 13688059 13688269 + 8.72 0.000 non-coding (NR_027103, exon 2 of 6) non-coding (NR_027103, exon 2 of 6) 37443 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr7-4612 chr7 23396428 23396638 + 8.72 0.000 promoter-TSS (NR_145734) promoter-TSS (NR_145734) 87 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA chr20-2807 chr20 57144758 57144968 + 8.72 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -68833 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr4-3708 chr4 60962414 60962624 + 8.72 0.000 Intergenic Intergenic 39900 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr2-11194 chr2 157573900 157574110 + 8.72 0.000 intron (NM_001111031, intron 2 of 8) intron (NM_001111031, intron 2 of 8) 23555 NM_001111031 130399 Hs.562901 NM_145259 ENSG00000123612 ACVR1C ACVRLK7|ALK7 activin A receptor type 1C protein-coding chr5-3064 chr5 33593511 33593721 + 8.72 0.000 intron (NM_001324512, intron 15 of 21) L1PA8|LINE|L1 152840 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr1-10609 chr1 177972580 177972790 + 8.72 0.000 intron (NR_151492, intron 9 of 22) OldhAT1|DNA|hAT-Ac -2441 NM_001356499 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr13-1075 chr13 46764181 46764391 + 8.72 0.000 Intergenic Intergenic 32875 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr13-3126 chr13 78336292 78336502 + 8.72 0.000 intron (NR_047001, intron 3 of 5) intron (NR_047001, intron 3 of 5) -259725 NR_158457 780529 Hs.587755 NR_158457 LOC780529 - uncharacterized LOC780529 ncRNA chr11-8369 chr11 84297429 84297639 + 8.72 0.000 intron (NM_001142699, intron 7 of 27) L2a|LINE|L2 19805 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr19-4257 chr19 56090027 56090237 + 8.72 0.000 intron (NM_001002836, intron 2 of 2) intron (NM_001002836, intron 2 of 2) 23448 NR_110741 101928886 Hs.434652 NR_110741 ENSG00000267522 LINC01864 - long intergenic non-protein coding RNA 1864 ncRNA chr11-8421 chr11 103670430 103670640 + 8.72 0.000 Intergenic Intergenic -179371 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr11-4421 chr11 88535923 88536133 + 8.72 0.000 intron (NM_001143831, intron 7 of 8) intron (NM_001143831, intron 7 of 8) 31452 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr13-2249 chr13 26018283 26018493 + 8.72 0.000 intron (NM_016529, intron 36 of 36) intron (NM_016529, intron 36 of 36) 32672 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr3-6188 chr3 61058461 61058671 + 8.72 0.000 intron (NR_148922, intron 2 of 3) MSTA|LTR|ERVL-MaLR 192886 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr3-10431 chr3 131502391 131502601 + 8.72 0.000 intron (NM_007208, intron 1 of 9) intron (NM_007208, intron 1 of 9) 475 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr12-7501 chr12 67808228 67808438 + 8.72 0.000 Intergenic Intergenic -78858 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr2-14609 chr2 233701859 233702069 + 8.72 0.000 intron (NM_205862, intron 2 of 5) L1P1|LINE|L1 9074 NM_001072 54578 Hs.554822 NM_001072 ENSG00000167165 UGT1A6 GNT1|HLUGP|HLUGP1|UDPGT|UDPGT 1-6|UGT-1A|UGT-1C|UGT-1E|UGT1|UGT1-01|UGT1-03|UGT1-05|UGT1.1|UGT1.3|UGT1.5|UGT1A|UGT1A1|UGT1A3|UGT1A5|UGT1A6S|UGT1C|UGT1E|UGT1F|hUG-BR1 UDP glucuronosyltransferase family 1 member A6 protein-coding chr14-4547 chr14 43556630 43556840 + 8.72 0.000 Intergenic Intergenic 950548 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr3-6168 chr3 58532728 58532938 + 8.72 0.000 intron (NM_003500, intron 5 of 14) intron (NM_003500, intron 5 of 14) 4357 NM_003500 8309 Hs.444959 NM_003500 ENSG00000168306 ACOX2 BCOX|BRCACOX|BRCOX|CBAS6|THCCox acyl-CoA oxidase 2 protein-coding chr2-6287 chr2 55623827 55624037 + 8.72 0.000 Intergenic HAL1|LINE|L1 -6310 NM_020463 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding chr7-5693 chr7 68903123 68903333 + 8.72 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 694396 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr20-3722 chr20 17054990 17055200 + 8.72 0.000 Intergenic L1PA12|LINE|L1 -171012 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr17-3744 chr17 28525263 28525473 + 8.72 0.000 intron (NM_001369369, intron 3 of 8) Tigger19b|DNA|TcMar-Tigger 1427 NM_003593 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chr12-1684 chr12 107196724 107196934 + 8.72 0.000 Intergenic MIR|SINE|MIR -103280 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr19-2701 chr19 18795447 18795657 + 8.72 0.000 Intergenic Intergenic -4247 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr13-2358 chr13 37870477 37870687 + 8.72 0.000 promoter-TSS (NM_016179) promoter-TSS (NM_016179) -157 NM_001135957 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr5-5852 chr5 180795962 180796172 + 8.72 0.000 intron (NR_157150, intron 1 of 1) intron (NR_157150, intron 1 of 1) 6739 NM_001364392 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr1-9373 chr1 30140328 30140538 + 8.72 0.000 Intergenic Intergenic -102821 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr3-6030 chr3 49604682 49604892 + 8.72 0.000 intron (NM_003458, intron 1 of 11) intron (NM_003458, intron 1 of 11) 50310 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr7-5312 chr7 25715219 25715429 + 8.72 0.000 intron (NR_157808, intron 1 of 4) intron (NR_157808, intron 1 of 4) 35708 NR_157814 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr2-6360 chr2 103282404 103282614 + 8.72 0.000 Intergenic LTR41|LTR|ERVL -298080 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr3-6559 chr3 121603712 121603922 + 8.72 0.000 intron (NM_016298, intron 1 of 3) AluSc8|SINE|Alu 10438 NM_016298 51725 Hs.272564 NM_016298 ENSG00000163833 FBXO40 FBX40 F-box protein 40 protein-coding chr9-5215 chr9 75246969 75247179 + 8.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 158560 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr11-6726 chr11 80919441 80919651 + 8.72 0.000 Intergenic MIRb|SINE|MIR -156743 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr19-4688 chr19 18086695 18086905 + 8.72 0.000 exon (NM_001290023, exon 1 of 17) exon (NM_001290023, exon 1 of 17) 134 NM_153701 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr5-7980 chr5 83724229 83724439 + 8.72 0.000 Intergenic MER57B1|LTR|ERV1 -3479 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr3-3585 chr3 57796301 57796511 + 8.72 0.000 intron (NM_001304420, intron 1 of 21) MIR|SINE|MIR 39150 NM_007159 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr2-10778 chr2 43162958 43163168 + 8.72 0.000 Intergenic Intergenic -60618 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chr3-5877 chr3 36768594 36768804 + 8.72 0.000 Intergenic Intergenic -28838 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr5-2770 chr5 167428642 167428852 + 8.72 0.000 intron (NM_001122679, intron 3 of 29) intron (NM_001122679, intron 3 of 29) -144912 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr12-5003 chr12 80217867 80218077 + 8.72 0.000 intron (NM_001368062, intron 10 of 62) intron (NM_001368062, intron 10 of 62) 8519 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr9-8290 chr9 113603934 113604144 + 8.72 0.000 Intergenic L2a|LINE|L2 9910 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr11-3847 chr11 71639411 71639621 + 8.72 0.000 Intergenic CpG -56641 NM_001005405 440051 Hs.679617 NM_001005405 ENSG00000204571 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding chr1-10969 chr1 214234919 214235129 + 8.72 0.000 Intergenic L1MB1|LINE|L1 -46135 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr5-4503 chr5 11143057 11143267 + 8.72 0.000 intron (NM_001288715, intron 11 of 20) intron (NM_001288715, intron 11 of 20) -381928 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chrX-1445 chrX 70300106 70300316 + 8.72 0.000 intron (NM_012310, intron 5 of 30) intron (NM_012310, intron 5 of 30) 10107 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chrX-2642 chrX 111457077 111457287 + 8.72 0.000 Intergenic Intergenic -44990 NM_001195553 1641 Hs.34780 NM_000555 ENSG00000077279 DCX DBCN|DC|LISX|SCLH|XLIS doublecortin protein-coding chr19-6277 chr19 7875891 7876101 + 8.72 0.000 Intergenic AluYm1|SINE|Alu -1555 NR_104345 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chrX-2916 chrX 152203606 152203816 + 8.72 0.000 intron (NM_000808, intron 7 of 9) MLT1D|LTR|ERVL-MaLR -65133 NM_001011543 4109 Hs.18048 NM_021048 ENSG00000124260 MAGEA10 CT1.10|MAGE10 MAGE family member A10 protein-coding chr3-4570 chr3 169414507 169414717 + 8.72 0.000 intron (NM_001366473, intron 1 of 15) L1P3|LINE|L1 -33255 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr3-2751 chr3 138862953 138863163 + 8.72 0.000 Intergenic Intergenic -28130 NM_006219 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr1-13816 chr1 19354512 19354722 + 8.72 0.000 intron (NM_001206540, intron 6 of 9) intron (NM_001206540, intron 6 of 9) 42291 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr5-3454 chr5 160749153 160749363 + 8.72 0.000 intron (NM_001366652, intron 2 of 24) intron (NM_001366652, intron 2 of 24) -63867 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr11-10416 chr11 115243029 115243239 + 8.72 0.000 intron (NM_001098517, intron 1 of 8) intron (NM_001098517, intron 1 of 8) -90443 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr1-14587 chr1 53618463 53618673 + 8.72 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 115636 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr3-2460 chr3 100033286 100033496 + 8.72 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) -68993 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr3-5805 chr3 28590811 28591021 + 8.72 0.000 intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 15638 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr2-13332 chr2 133286392 133286602 + 8.72 0.000 intron (NM_207481, intron 4 of 17) intron (NM_207481, intron 4 of 17) 20302 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr5-7281 chr5 14234324 14234534 + 8.72 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 91087 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chrX-5333 chrX 146614635 146614845 + 8.72 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -195031 NM_001244892 100133053 NM_001244892 ENSG00000235699 CXorf51B CXorf51A chromosome X open reading frame 51B protein-coding chr22-1486 chr22 30541569 30541779 + 8.72 0.000 intron (NM_001193336, intron 1 of 11) AluSz6|SINE|Alu 980 NM_001353441 730005 Hs.505605 NM_001193336 ENSG00000214491 SEC14L6 - SEC14 like lipid binding 6 protein-coding chr4-7586 chr4 80565345 80565555 + 8.72 0.000 intron (NM_152770, intron 2 of 5) L1MC5|LINE|L1 229730 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr20-4150 chr20 44033968 44034178 + 8.72 0.000 intron (NM_001098797, intron 3 of 8) L2b|LINE|L2 88177 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr4-5046 chr4 141905959 141906169 + 8.72 0.000 Intergenic Intergenic 269481 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr2-11417 chr2 219506589 219506799 + 8.72 0.000 intron (NM_205847, intron 12 of 12) intron (NM_205847, intron 12 of 12) -7476 NM_018674 55515 Hs.87469 NM_018674 ENSG00000072182 ASIC4 ACCN4|BNAC4 acid sensing ion channel subunit family member 4 protein-coding chrX-592 chrX 118875589 118875799 + 8.72 0.000 intron (NR_110393, intron 6 of 6) MSTD-int|LTR|ERVL-MaLR 36138 NR_110393 101928287 Hs.496647 NR_110393 ENSG00000203650 LINC01285 - long intergenic non-protein coding RNA 1285 ncRNA chr7-6151 chr7 125048726 125048936 + 8.72 0.000 intron (NR_125718, intron 4 of 10) L1P3|LINE|L1 -118848 NR_003103 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr2-12359 chr2 51475484 51475694 + 8.72 0.000 intron (NR_135237, intron 4 of 10) intron (NR_135237, intron 4 of 10) 442988 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr15-4847 chr15 74702260 74702470 + 8.72 0.000 Intergenic L1ME1|LINE|L1 -6341 NM_001351378 80153 Hs.96852 NM_025083 ENSG00000179151 EDC3 LSM16|MRT50|YJDC|YJEFN2|hYjeF_N2-15q23 enhancer of mRNA decapping 3 protein-coding chr10-9155 chr10 128627866 128628076 + 8.72 0.000 Intergenic Intergenic -284862 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr6-7451 chr6 55651599 55651809 + 8.72 0.000 Intergenic L1MB1|LINE|L1 -72490 NM_001042406 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr20-1731 chr20 44153844 44154054 + 8.72 0.000 intron (NM_020433, intron 2 of 5) intron (NM_020433, intron 2 of 5) 33239 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr2-7136 chr2 191689439 191689649 + 8.72 0.000 promoter-TSS (NR_131917) promoter-TSS (NR_131917) -637 NR_131917 105747689 Hs.104972 NR_131917 LOC105747689 - uncharacterized LOC105747689 ncRNA chr2-8988 chr2 191866338 191866548 + 8.72 0.000 Intergenic Intergenic -19355 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr7-3642 chr7 43431243 43431453 + 8.72 0.000 intron (NM_001287059, intron 7 of 27) intron (NM_001287059, intron 7 of 27) 91194 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr5-5731 chr5 169207122 169207332 + 8.72 0.000 intron (NM_003062, intron 3 of 35) intron (NM_003062, intron 3 of 35) 56467 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr13-902 chr13 46587918 46588128 + 8.72 0.000 intron (NM_001164213, intron 1 of 18) intron (NM_001164213, intron 1 of 18) 34853 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr18-1406 chr18 265885 266095 + 8.72 0.000 intron (NM_005131, intron 1 of 20) intron (NM_005131, intron 1 of 20) 2057 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr8-6713 chr8 85463165 85463375 + 8.72 0.000 promoter-TSS (NM_001293675) promoter-TSS (NM_001293675) -216 NR_121632 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA chr5-4572 chr5 23807016 23807226 + 8.72 0.000 Intergenic HERVL-int|LTR|ERVL -144227 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA chr7-3886 chr7 109986729 109986939 + 8.72 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -26621 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr3-10660 chr3 149751489 149751699 + 8.72 0.000 intron (NR_135149, intron 2 of 4) intron (NR_135149, intron 2 of 4) 895 NM_016094 51122 Hs.432729 NM_016094 ENSG00000114744 COMMD2 HSPC042 COMM domain containing 2 protein-coding chr15-1045 chr15 41391954 41392164 + 8.72 0.000 intron (NM_016013, intron 3 of 4) L2a|LINE|L2 10437 NM_016013 51103 Hs.106529 NM_016013 ENSG00000137806 NDUFAF1 CGI-65|CGI65|CIA30|MC1DN11 NADH:ubiquinone oxidoreductase complex assembly factor 1 protein-coding chr10-5275 chr10 68261714 68261924 + 8.72 0.000 Intergenic L1ME3|LINE|L1 -29706 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding chr2-6933 chr2 111676449 111676659 + 8.72 0.000 Intergenic Intergenic 94580 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr18-2386 chr18 77542402 77542612 + 8.72 0.000 Intergenic Intergenic 292659 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr16-4749 chr16 84773355 84773565 + 8.72 0.000 intron (NR_073577, intron 10 of 11) intron (NR_073577, intron 10 of 11) -46525 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr1-16532 chr1 232177751 232177961 + 8.72 0.000 Intergenic Intergenic 252022 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr11-3586 chr11 64278799 64279009 + 8.72 0.000 intron (NM_004322, intron 1 of 2) intron (NM_004322, intron 1 of 2) -5435 NM_001170726 56834 Hs.523763 NM_020155 ENSG00000173264 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding chr12-3612 chr12 57871212 57871422 + 8.72 0.000 intron (NR_148947, intron 3 of 3) AluJb|SINE|Alu -24588 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr4-4141 chr4 7771990 7772200 + 8.72 0.000 intron (NM_198595, intron 15 of 16) intron (NM_198595, intron 15 of 16) 18005 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr4-5007 chr4 138775818 138776028 + 8.72 0.000 Intergenic Intergenic 236723 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr12-5341 chr12 116150057 116150267 + 8.72 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) -1508 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr1-10792 chr1 201934100 201934310 + 8.72 0.000 intron (NM_012134, intron 1 of 2) intron (NM_012134, intron 1 of 2) 12343 NM_012134 25802 Hs.519075 NM_012134 ENSG00000163431 LMOD1 1D|64kD|D1|SM-LMOD|SMLMOD leiomodin 1 protein-coding chr7-3061 chr7 140209186 140209396 + 8.72 0.000 Intergenic LTR16|LTR|ERVL 32030 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chrX-2111 chrX 25875026 25875236 + 8.72 0.000 Intergenic AluJo|SINE|Alu -263212 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr18-1858 chr18 24818632 24818842 + 8.72 0.000 Intergenic Intergenic 92956 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chr4-5421 chr4 8720547 8720757 + 8.72 0.000 Intergenic Intergenic 127887 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr5-3838 chr5 116511409 116511619 + 8.72 0.000 intron (NM_001300780, intron 1 of 19) intron (NM_001300780, intron 1 of 19) -62904 NR_147170 105379132 NR_147170 SEMA6A-AS2 - SEMA6A antisense RNA 2 ncRNA chr17-5787 chr17 62965499 62965709 + 8.72 0.000 promoter-TSS (NM_025185) promoter-TSS (NM_025185) -631 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr1-6563 chr1 32116144 32116354 + 8.72 0.000 intron (NM_012316, intron 1 of 13) AluYk3|SINE|Alu 8193 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr3-6086 chr3 52293579 52293789 + 8.72 0.000 TTS (NR_029677) TTS (NR_029677) 624 NR_029677 406925 NR_029677 ENSG00000207926 MIR135A1 MIRN135-1|MIRN135A1|mir-135a-1 microRNA 135a-1 ncRNA chr4-4871 chr4 114512870 114513080 + 8.72 0.000 Intergenic MamRTE1|LINE|RTE-BovB -85427 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr5-3761 chr5 59092858 59093068 + 8.72 0.000 intron (NM_001364603, intron 5 of 15) HAL1|LINE|L1 -53487 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr7-2694 chr7 23467535 23467745 + 8.72 0.000 intron (NM_006547, intron 2 of 14) intron (NM_006547, intron 2 of 14) 2851 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding chr13-1677 chr13 76180109 76180319 + 8.72 0.000 Intergenic MER66C|LTR|ERV1 -245082 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr2-7545 chr2 23376930 23377140 + 8.72 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -8144 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr6-7445 chr6 55023363 55023573 + 8.72 0.000 Intergenic L1MA9|LINE|L1 -82992 NM_001526 3062 Hs.151624 NM_001526 ENSG00000137252 HCRTR2 OX2R hypocretin receptor 2 protein-coding chr2-7839 chr2 47181342 47181552 + 8.72 0.000 Intergenic L2c|LINE|L2 -4511 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr6-8610 chr6 168731397 168731607 + 8.72 0.000 Intergenic L1MA2|LINE|L1 232880 NR_136249 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr2-10036 chr2 28487283 28487493 + 8.72 0.000 Intergenic Intergenic -8672 NM_153021 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr15-825 chr15 96330485 96330695 + 8.72 0.000 promoter-TSS (NM_021005) promoter-TSS (NM_021005) -110 NM_021005 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr2-3638 chr2 136143266 136143476 + 8.72 0.000 Intergenic Charlie25|DNA|hAT-Charlie -25216 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr19-6193 chr19 5327711 5327921 + 8.72 0.000 intron (NM_002850, intron 1 of 37) AluJr|SINE|Alu 12996 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr7-7821 chr7 3186380 3186590 + 8.72 0.000 Intergenic L1ME3G|LINE|L1 -27912 NR_126024 100129603 Hs.652997 NR_126024 LOC100129603 - uncharacterized LOC100129603 ncRNA chr12-7582 chr12 76275449 76275659 + 8.72 0.000 intron (NR_146531, intron 1 of 3) L2|LINE|L2 15671 NR_146531 105369848 NR_146531 LNCOG LINC02407|lncRNA-OG lncRNA osteogenesis associated ncRNA chr2-7799 chr2 43983089 43983299 + 8.72 0.000 intron (NM_133259, intron 1 of 37) intron (NM_133259, intron 1 of 37) 12795 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr11-4846 chr11 19769898 19770108 + 8.72 0.000 intron (NM_182964, intron 1 of 37) intron (NM_182964, intron 1 of 37) -9920 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr3-8673 chr3 180982301 180982511 + 8.72 0.000 3' UTR (NM_001013439, exon 18 of 18) 3' UTR (NM_001013439, exon 18 of 18) 7112 NM_001190233 131118 Hs.230601 NM_145261 ENSG00000205981 DNAJC19 PAM18|TIM14|TIMM14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding chr17-6035 chr17 78943372 78943582 + 8.72 0.000 Intergenic Intergenic -18090 NM_003255 7077 Hs.633514 NM_003255 ENSG00000035862 TIMP2 CSC-21K|DDC8 TIMP metallopeptidase inhibitor 2 protein-coding chr18-1923 chr18 34117475 34117685 + 8.72 0.000 intron (NM_001353232, intron 2 of 9) intron (NM_001353232, intron 2 of 9) -68968 NM_001198549 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr2-14479 chr2 225191606 225191816 + 8.72 0.000 Intergenic LTR37A|LTR|ERV1 -149243 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr17-5432 chr17 37813839 37814049 + 8.72 0.000 Intergenic Intergenic -68885 NM_001304286 6928 Hs.191144 NM_000458 ENSG00000275410 HNF1B FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1 HNF1 homeobox B protein-coding chr15-2451 chr15 78130393 78130603 + 8.72 0.000 intron (NR_125435, intron 1 of 4) intron (NR_125435, intron 1 of 4) 947 NM_001301224 10518 Hs.129867 NM_006383 ENSG00000136425 CIB2 DFNB48|KIP2|USH1J calcium and integrin binding family member 2 protein-coding chr10-7989 chr10 60396931 60397141 + 8.72 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -7161 NM_020987 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr3-3790 chr3 13785219 13785429 + 8.72 0.000 Intergenic L1ME4b|LINE|L1 94747 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding chrX-2216 chrX 41983025 41983235 + 8.72 0.000 Intergenic Intergenic -59576 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr7-3435 chr7 157276925 157277135 + 8.72 0.000 Intergenic Intergenic -59974 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr3-11146 chr3 188578476 188578686 + 8.72 0.000 intron (NM_001167672, intron 4 of 9) intron (NM_001167672, intron 4 of 9) -9915 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr17-6067 chr17 79678566 79678776 + 8.72 0.000 Intergenic Intergenic 28578 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr7-7387 chr7 68271741 68271951 + 8.72 0.000 Intergenic AluSq2|SINE|Alu 251593 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr2-11168 chr2 149467730 149467940 + 8.72 0.000 intron (NM_194317, intron 3 of 4) intron (NM_194317, intron 3 of 4) -119523 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr3-9595 chr3 56383279 56383489 + 8.72 0.000 intron (NR_132749, intron 2 of 17) L2a|LINE|L2 85083 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr10-2483 chr10 31005018 31005228 + 8.72 0.000 intron (NM_001143766, intron 1 of 7) L1MA9|LINE|L1 -5606 NM_001143769 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr5-4991 chr5 81019441 81019651 + 8.72 0.000 intron (NM_006909, intron 1 of 26) intron (NM_006909, intron 1 of 26) -58639 NR_105015 102524628 Hs.737159 NR_105015 ENSG00000251450 RASGRF2-AS1 - RASGRF2 antisense RNA 1 ncRNA chr11-5887 chr11 12279821 12280031 + 8.72 0.000 Intergenic Intergenic -6974 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr2-11628 chr2 4510059 4510269 + 8.72 0.000 Intergenic Charlie10b|DNA|hAT-Charlie 146058 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr3-7980 chr3 177361062 177361272 + 8.72 0.000 Intergenic Intergenic 66725 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr7-3945 chr7 129947171 129947381 + 8.72 0.000 intron (NM_001202498, intron 1 of 6) intron (NM_001202498, intron 1 of 6) 5684 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chrX-2372 chrX 68709937 68710147 + 8.72 0.000 intron (NM_001142504, intron 1 of 13) intron (NM_001142504, intron 1 of 13) 16403 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr1-10485 chr1 164482355 164482565 + 8.72 0.000 Intergenic LTR16|LTR|ERVL -76900 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr15-1872 chr15 63629678 63629888 + 8.72 0.000 intron (NM_003922, intron 69 of 77) intron (NM_003922, intron 69 of 77) -28956 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr15-3017 chr15 56743239 56743449 + 8.72 0.000 Intergenic LTR67B|LTR|ERVL -9258 NM_001288589 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding chr16-4131 chr16 3677568 3677778 + 8.72 0.000 intron (NM_001272049, intron 4 of 16) intron (NM_001272049, intron 4 of 16) 22969 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr12-4799 chr12 54681505 54681715 + 8.72 0.000 Intergenic Intergenic -33245 NM_053283 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr22-1072 chr22 22808928 22809138 + 8.72 0.000 Intergenic L1M4|LINE|L1 -13743 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr7-8037 chr7 20172792 20173002 + 8.72 0.000 intron (NM_182762, intron 1 of 6) intron (NM_182762, intron 1 of 6) 30981 NR_046756 100874041 Hs.145104 NR_046756 ENSG00000228598 MACC1-AS1 - MACC1 antisense RNA 1 ncRNA chr6-5064 chr6 114233954 114234164 + 8.72 0.000 intron (NR_125845, intron 8 of 9) intron (NR_125845, intron 8 of 9) -171182 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr2-14483 chr2 225718849 225719059 + 8.72 0.000 Intergenic Intergenic 318068 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr1-16160 chr1 205950347 205950557 + 8.72 0.000 intron (NR_110983, intron 2 of 3) intron (NR_110983, intron 2 of 3) -6992 NM_134325 115019 Hs.164073 NM_052934 ENSG00000174502 SLC26A9 - solute carrier family 26 member 9 protein-coding chr4-5544 chr4 125176658 125176868 + 8.72 0.000 Intergenic Intergenic -139649 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chrX-1997 chrX 13487429 13487639 + 8.72 0.000 Intergenic Intergenic -82067 NM_015507 25975 Hs.12844 NM_015507 ENSG00000198759 EGFL6 MAEG|W80 EGF like domain multiple 6 protein-coding chrX-3681 chrX 105783563 105783773 + 8.72 0.000 Intergenic L1MB5|LINE|L1 -38871 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chrX-4952 chrX 112642637 112642847 + 8.72 0.000 intron (NM_178175, intron 3 of 3) Charlie26a|DNA|hAT-Charlie 37196 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr15-5056 chr15 84949067 84949277 + 8.72 0.000 intron (NM_001321722, intron 18 of 18) intron (NM_001321722, intron 18 of 18) -31295 NM_001243137 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr7-3131 chr7 52045609 52045819 + 8.72 0.000 Intergenic L1ME3A|LINE|L1 -652458 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr5-4817 chr5 59863983 59864193 + 8.72 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 29638 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-2974 chr1 156476041 156476251 + 8.72 0.000 intron (NM_001271629, intron 7 of 10) intron (NM_001271629, intron 7 of 10) 14541 NM_001271629 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr12-2409 chr12 47686744 47686954 + 8.72 0.000 exon (NM_001146075, exon 9 of 16) exon (NM_001146075, exon 9 of 16) 19181 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr7-5565 chr7 47188233 47188443 + 8.72 0.000 Intergenic Intergenic 276465 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr18-1974 chr18 38774677 38774887 + 8.72 0.000 Intergenic Intergenic 847393 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr8-4385 chr8 102728412 102728622 + 8.72 0.000 Intergenic Intergenic 72269 NR_160673 101927245 NR_160672 LOC101927245 - uncharacterized LOC101927245 ncRNA chr5-9002 chr5 165061338 165061548 + 8.72 0.000 Intergenic LTR33|LTR|ERVL 591164 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr12-4479 chr12 18262481 18262691 + 8.72 0.000 intron (NM_001288774, intron 1 of 32) intron (NM_001288774, intron 1 of 32) 1046 NM_001288772 5288 Hs.22500 NM_004570 ENSG00000139144 PIK3C2G PI3K-C2-gamma|PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma protein-coding chr7-6560 chr7 56171222 56171432 + 8.72 0.000 Intergenic AluJr|SINE|Alu -54910 NM_001145712 389493 Hs.177948 NM_001145712 ENSG00000185290 NUPR2 NUPR1L nuclear protein 2, transcriptional regulator protein-coding chr1-9190 chr1 21567719 21567929 + 8.72 0.000 intron (NM_001177520, intron 4 of 9) intron (NM_001177520, intron 4 of 9) 16554 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr3-6586 chr3 124781752 124781962 + 8.72 0.000 intron (NM_001354766, intron 9 of 13) intron (NM_001354766, intron 9 of 13) 49418 NR_036088 100422864 NR_036088 ENSG00000265981 MIR544B - microRNA 544b ncRNA chr7-1997 chr7 10939534 10939744 + 8.72 0.000 intron (NM_002489, intron 1 of 3) intron (NM_002489, intron 1 of 3) 514 NM_002489 4697 Hs.50098 NM_002489 ENSG00000189043 NDUFA4 CI-9k|CI-MLRQ|COXFA4|MLRQ NDUFA4 mitochondrial complex associated protein-coding chr8-4174 chr8 80175038 80175248 + 8.72 0.000 Intergenic Intergenic -3579 NM_001025253 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr2-3298 chr2 96098777 96098987 + 8.72 0.000 Intergenic Intergenic 17689 NM_000682 151 Hs.247686 NM_000682 ENSG00000274286 ADRA2B ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR adrenoceptor alpha 2B protein-coding chr5-5197 chr5 112611566 112611776 + 8.72 0.000 Intergenic L1MC5a|LINE|L1 -16765 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr17-5942 chr17 75899792 75900002 + 8.72 0.000 intron (NM_032478, intron 6 of 8) intron (NM_032478, intron 6 of 8) -2946 NM_173547 201292 Hs.189823 NM_173547 ENSG00000141569 TRIM65 4732463G12Rik tripartite motif containing 65 protein-coding chr15-1153 chr15 67884933 67885143 + 8.72 0.000 Intergenic CpG -44993 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr7-1806 chr7 100602956 100603166 + 8.72 0.000 non-coding (NR_038910, exon 2 of 9) non-coding (NR_038910, exon 2 of 9) 698 NM_002593 5118 Hs.202097 NM_002593 ENSG00000106333 PCOLCE PCPE|PCPE-1|PCPE1 procollagen C-endopeptidase enhancer protein-coding chr15-3493 chr15 97877938 97878148 + 8.72 0.000 Intergenic Intergenic -3614 NR_024172 91948 Hs.130423 NR_024172 ENSG00000251209 LINC00923 - long intergenic non-protein coding RNA 923 ncRNA chrX-1888 chrX 132643025 132643235 + 8.72 0.000 intron (NM_147175, intron 3 of 3) intron (NM_147175, intron 3 of 3) -24512 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr8-7475 chr8 142424119 142424329 + 8.72 0.000 Intergenic Intergenic -21042 NM_001366902 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chrX-4304 chrX 43760025 43760235 + 8.72 0.000 Intergenic Intergenic 105223 NM_001270458 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr17-1213 chr17 82735504 82735714 + 8.72 0.000 promoter-TSS (NM_022158) promoter-TSS (NM_022158) -6 NM_022158 64122 Hs.151135 NM_022158 ENSG00000167363 FN3K - fructosamine 3 kinase protein-coding chr1-12495 chr1 20595279 20595489 + 8.72 0.000 intron (NM_001785, intron 1 of 3) intron (NM_001785, intron 1 of 3) 6287 NM_001785 978 Hs.466910 NM_001785 ENSG00000158825 CDA CDD cytidine deaminase protein-coding chrX-3103 chrX 149570760 149570970 + 8.72 0.000 Intergenic MER31-int|LTR|ERV1 16587 NM_005365 4108 Hs.460974 NM_005365 ENSG00000123584 MAGEA9 CT1.9|MAGE9 MAGE family member A9 protein-coding chr8-3834 chr8 30308034 30308244 + 8.72 0.000 Intergenic L1MC1|LINE|L1 -76362 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr7-8597 chr7 66894759 66894969 + 8.72 0.000 Intergenic L2a|LINE|L2 -9256 NR_136637 644794 Hs.552124 NR_136637 LINC02604 lncHERG long intergenic non-protein coding RNA 2604 ncRNA chr11-8302 chr11 73881602 73881812 + 8.72 0.000 intron (NM_025155, intron 2 of 11) AluSc8|SINE|Alu 4708 NM_025155 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr1-9364 chr1 29787093 29787303 + 8.72 0.000 Intergenic Intergenic 250414 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr7-7408 chr7 74001405 74001615 + 8.72 0.000 Intergenic AluSx1|SINE|Alu -26279 NM_001278918 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr15-4981 chr15 79943310 79943520 + 8.72 0.000 Intergenic AluJo|SINE|Alu -19661 NR_037653 400410 Hs.729127 NM_001100879 ENSG00000180953 ST20 HCCS-1 suppressor of tumorigenicity 20 protein-coding chr1-11016 chr1 220702085 220702295 + 8.72 0.000 Intergenic LTR64|LTR|ERV1 11827 NM_024709 79762 Hs.519839 NM_024709 ENSG00000162817 C1orf115 - chromosome 1 open reading frame 115 protein-coding chr6-5109 chr6 119985853 119986063 + 8.72 0.000 Intergenic L1MB8|LINE|L1 -29221 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr9-5426 chr9 96377907 96378117 + 8.72 0.000 intron (NR_104627, intron 1 of 12) L2|LINE|L2 5698 NR_104627 11046 Hs.494556 NM_007001 ENSG00000130958 SLC35D2 HFRC1|SQV7L|UGTrel8|hfrc solute carrier family 35 member D2 protein-coding chr16-5569 chr16 35783303 35783513 + 8.72 0.000 Intergenic ALR/Alpha|Satellite|centr 36856 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA chr16-4481 chr16 56881064 56881274 + 8.72 0.000 intron (NM_001126108, intron 12 of 25) intron (NM_001126108, intron 12 of 25) 15962 NM_000339 6559 Hs.669115 NM_000339 ENSG00000070915 SLC12A3 NCC|NCCT|TSC solute carrier family 12 member 3 protein-coding chr11-4943 chr11 66077523 66077733 + 8.72 0.000 intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 7356 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr5-4702 chr5 40477599 40477809 + 8.72 0.000 Intergenic Intergenic -202211 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr5-6976 chr5 147084661 147084871 + 8.72 0.000 Intergenic MIR3|SINE|MIR -3246 NM_001271899 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr7-5109 chr7 3808119 3808329 + 8.72 0.000 intron (NM_152744, intron 4 of 44) intron (NM_152744, intron 4 of 44) -321461 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr5-4066 chr5 56434667 56434877 + 8.72 0.000 Intergenic Intergenic 46997 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr8-7022 chr8 110516067 110516277 + 8.72 0.000 Intergenic L1PA8|LINE|L1 511261 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr13-2114 chr13 89982855 89983065 + 8.72 0.000 Intergenic LTR78|LTR|ERV1 136757 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr3-7198 chr3 190515261 190515471 + 8.72 0.000 intron (NM_001364879, intron 1 of 10) intron (NM_001364879, intron 1 of 10) 1281 NM_001167928 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr5-4151 chr5 92909843 92910053 + 8.72 0.000 Intergenic LTR104_Mam|LTR|Gypsy 661395 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr19-6088 chr19 3267457 3267667 + 8.72 0.000 intron (NR_033342, intron 2 of 12) intron (NR_033342, intron 2 of 12) 42284 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr10-4382 chr10 44753007 44753217 + 8.72 0.000 Intergenic Intergenic -158204 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr6-8317 chr6 145118396 145118606 + 8.72 0.000 Intergenic AluSz6|SINE|Alu 568376 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr7-5563 chr7 47144458 47144668 + 8.72 0.000 Intergenic L3|LINE|CR1 320240 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr2-12683 chr2 75870853 75871063 + 8.72 0.000 Intergenic L2a|LINE|L2 -160043 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr5-3558 chr5 55456938 55457148 + 8.72 0.000 intron (NR_103485, intron 4 of 6) AluSg|SINE|Alu 51883 NR_049869 100847019 NR_049869 ENSG00000265135 MIR5687 - microRNA 5687 ncRNA chr2-6079 chr2 160591531 160591741 + 8.72 0.000 Intergenic Intergenic -97829 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr8-3330 chr8 35890506 35890716 + 8.72 0.000 Intergenic Intergenic -180291 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr1-10873 chr1 205673475 205673685 + 8.72 0.000 intron (NM_033102, intron 1 of 4) intron (NM_033102, intron 1 of 4) 6929 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chr16-4281 chr16 26331762 26331972 + 8.72 0.000 Intergenic L1MC2|LINE|L1 306630 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr7-3292 chr7 32844896 32845106 + 8.72 0.000 Intergenic Intergenic 18699 NR_132360 102724668 Hs.636806 NR_132360 DPY19L1P2 THC1072510 DPY19L1 pseudogene 2 pseudo chr15-3732 chr15 57161327 57161537 + 8.72 0.000 intron (NM_207038, intron 5 of 19) intron (NM_207038, intron 5 of 19) -57998 NM_001306220 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding KI270733.1-18 KI270733.1 129971 130181 + 8.72 0.000 NA NA NA NA chr2-8029 chr2 70648005 70648215 + 8.72 0.000 Intergenic Intergenic -94284 NM_003236 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr5-3043 chr5 17295038 17295248 + 8.72 0.000 Intergenic Intergenic 77512 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr17-6569 chr17 45137536 45137746 + 8.72 0.000 intron (NM_001135707, intron 6 of 9) intron (NM_001135707, intron 6 of 9) 1954 NM_001135705 79777 Hs.110298 NM_024722 ENSG00000181513 ACBD4 HMFT0700 acyl-CoA binding domain containing 4 protein-coding chr3-5703 chr3 14833343 14833553 + 8.72 0.000 intron (NM_152536, intron 1 of 19) intron (NM_152536, intron 1 of 19) 14486 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr13-2359 chr13 37884267 37884477 + 8.72 0.000 Intergenic Intergenic -13947 NM_001135957 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr4-7867 chr4 103643807 103644017 + 8.72 0.000 intron (NM_001059, intron 3 of 4) intron (NM_001059, intron 3 of 4) 76073 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr9-3032 chr9 127844891 127845101 + 8.72 0.000 intron (NM_001114753, intron 1 of 14) intron (NM_001114753, intron 1 of 14) 2171 NM_001278138 2022 Hs.76753 NM_000118 ENSG00000106991 ENG END|HHT1|ORW1 endoglin protein-coding chr1-7633 chr1 3601181 3601391 + 8.72 0.000 intron (NM_001409, intron 2 of 36) intron (NM_001409, intron 2 of 36) 10222 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chr2-5055 chr2 1972712 1972922 + 8.72 0.000 intron (NM_015025, intron 8 of 24) intron (NM_015025, intron 8 of 24) -228302 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr14-4365 chr14 24994245 24994455 + 8.72 0.000 intron (NM_001351940, intron 1 of 6) intron (NM_001351940, intron 1 of 6) 54650 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr16-4291 chr16 27587101 27587311 + 8.72 0.000 intron (NM_015202, intron 2 of 27) MIR|SINE|MIR 37062 NM_015202 23247 Hs.460459 NM_015202 ENSG00000047578 KIAA0556 JBTS26 KIAA0556 protein-coding chr6-8036 chr6 119740047 119740257 + 8.72 0.000 intron (NR_134600, intron 2 of 3) intron (NR_134600, intron 2 of 3) 190344 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr16-4619 chr16 70602160 70602370 + 8.72 0.000 intron (NM_152456, intron 1 of 6) MIRc|SINE|MIR -21727 NM_001172772 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr20-3335 chr20 23882364 23882574 + 8.72 0.000 Intergenic Intergenic -2721 NM_001900 1473 Hs.121489 NM_001900 ENSG00000170367 CST5 - cystatin D protein-coding chr6-3920 chr6 74750036 74750246 + 8.72 0.000 Intergenic Intergenic 378641 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr7-9257 chr7 123452652 123452862 + 8.72 0.000 exon (NM_178827, exon 13 of 13) exon (NM_178827, exon 13 of 13) 80191 NM_001282855 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr1-8730 chr1 234075394 234075604 + 8.72 0.000 intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -138712 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr5-3848 chr5 123438925 123439135 + 8.72 0.000 Intergenic MER113|DNA|hAT-Charlie -15438 NM_001166226 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr7-9114 chr7 107634831 107635041 + 8.72 0.000 Intergenic HAL1|LINE|L1 -25892 NM_000441 5172 Hs.571246 NM_000441 ENSG00000091137 SLC26A4 DFNB4|EVA|PDS|TDH2B solute carrier family 26 member 4 protein-coding chr8-4342 chr8 100451284 100451494 + 8.72 0.000 Intergenic AluSx1|SINE|Alu 68626 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chrX-1040 chrX 101617798 101618008 + 8.72 0.000 promoter-TSS (NR_033669) promoter-TSS (NR_033669) 97 NM_019007 54470 Hs.83530 NM_019007 ENSG00000198960 ARMCX6 GASP10 armadillo repeat containing X-linked 6 protein-coding chr4-4322 chr4 32475102 32475312 + 8.72 0.000 Intergenic Intergenic 124169 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr13-3154 chr13 98947965 98948175 + 8.72 0.000 intron (NM_001366682, intron 2 of 53) intron (NM_001366682, intron 2 of 53) 29994 NM_001366679 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr11-7974 chr11 9260578 9260788 + 8.72 0.000 intron (NR_145966, intron 1 of 21) intron (NR_145966, intron 1 of 21) 4643 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding KI270819.1-4 KI270819.1 83402 83612 + 8.72 0.000 NA NA NA NA chr4-3774 chr4 95321459 95321669 + 8.72 0.000 intron (NM_003728, intron 2 of 15) intron (NM_003728, intron 2 of 15) 227409 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chrX-2580 chrX 104396956 104397166 + 8.72 0.000 Intergenic Intergenic -142128 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr20-1766 chr20 50996894 50997104 + 8.72 0.000 Intergenic Intergenic 26108 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr2-5867 chr2 239668785 239668995 + 8.72 0.000 Intergenic Intergenic -93970 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr6-4913 chr6 97109766 97109976 + 8.72 0.000 intron (NM_001323256, intron 7 of 7) intron (NM_001323256, intron 7 of 7) 99795 NM_001323261 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr5-3464 chr5 168535631 168535841 + 8.72 0.000 Intergenic Intergenic 6431 NM_001355274 345630 Hs.166262 NM_001355274 ENSG00000188573 FBLL1 - fibrillarin like 1 protein-coding chr2-11112 chr2 131335445 131335655 + 8.72 0.000 Intergenic Intergenic 28608 NM_001077637 150786 Hs.645670 NM_001077637 ENSG00000233087 RAB6D RAB6CL|WTH3DI RAB6D, member RAS oncogene family protein-coding chr5-5291 chr5 124649616 124649826 + 8.72 0.000 intron (NM_020747, intron 2 of 8) intron (NM_020747, intron 2 of 8) 95391 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr1-13286 chr1 229434040 229434250 + 8.72 0.000 promoter-TSS (NM_001100) promoter-TSS (NM_001100) -49 NM_001100 58 Hs.1288 NM_001100 ENSG00000143632 ACTA1 ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3|SHPM actin alpha 1, skeletal muscle protein-coding chr12-5313 chr12 112392179 112392389 + 8.72 0.000 Intergenic L1M2|LINE|L1 -9853 NM_001109662 283450 Hs.530943 NM_173813 ENSG00000173064 HECTD4 C12ord51|C12orf51|HEEL|POTAGE HECT domain E3 ubiquitin protein ligase 4 protein-coding chr7-9254 chr7 122695288 122695498 + 8.72 0.000 intron (NM_001167940, intron 2 of 29) intron (NM_001167940, intron 2 of 29) 3724 NM_139175 168433 Hs.126730 NM_139175 ENSG00000188050 RNF133 - ring finger protein 133 protein-coding chr3-6021 chr3 49279561 49279771 + 8.72 0.000 intron (NM_199443, intron 19 of 20) intron (NM_199443, intron 19 of 20) -2434 NM_198562 375341 Hs.403828 NM_198562 ENSG00000188315 C3orf62 - chromosome 3 open reading frame 62 protein-coding chr5-8622 chr5 139631511 139631721 + 8.72 0.000 Intergenic Intergenic -15683 NM_001317201 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr9-8547 chr9 126875692 126875902 + 8.72 0.000 intron (NM_001099270, intron 1 of 1) L1MD|LINE|L1 15158 NM_001099270 403341 Hs.177633 NM_203482 ENSG00000177125 ZBTB34 ZNF918 zinc finger and BTB domain containing 34 protein-coding chr5-6706 chr5 66640477 66640687 + 8.72 0.000 intron (NM_001290228, intron 1 of 4) AluY|SINE|Alu 44189 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr12-7034 chr12 38960369 38960579 + 8.72 0.000 Intergenic Intergenic -54883 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr14-3300 chr14 85085699 85085909 + 8.72 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -186128 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr3-4681 chr3 47554987 47555197 + 8.72 0.000 Intergenic L1MCc|LINE|L1 23773 NM_001206943 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr17-7836 chr17 41585871 41586081 + 8.72 0.000 intron (NM_000526, intron 1 of 7) MIR3|SINE|MIR 919 NM_000526 3861 Hs.654380 NM_000526 ENSG00000186847 KRT14 CK14|EBS3|EBS4|K14|NFJ keratin 14 protein-coding chr1-10831 chr1 203755693 203755903 + 8.72 0.000 Intergenic Intergenic -9385 NM_001136190 54900 Hs.272794 NM_017773 ENSG00000122188 LAX1 LAX lymphocyte transmembrane adaptor 1 protein-coding chr10-6985 chr10 69825324 69825534 + 8.72 0.000 intron (NM_001368898, intron 3 of 33) L2a|LINE|L2 23523 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr4-7273 chr4 48493241 48493451 + 8.72 0.000 intron (NM_175619, intron 3 of 3) intron (NM_175619, intron 3 of 3) 3094 NM_175619 326340 Hs.276457 NM_175619 ENSG00000182223 ZAR1 Z3CXXC6 zygote arrest 1 protein-coding chr1-7128 chr1 203152622 203152832 + 8.72 0.000 intron (NM_001365066, intron 2 of 2) intron (NM_001365066, intron 2 of 2) 23099 NM_004997 4608 Hs.927 NM_004997 ENSG00000133055 MYBPH - myosin binding protein H protein-coding chr5-6335 chr5 134279677 134279887 + 8.72 0.000 Intergenic AluSx1|SINE|Alu -53709 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr6-2920 chr6 20197348 20197558 + 8.72 0.000 intron (NM_001080480, intron 1 of 12) MER4A1_|LTR|ERV1 15016 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr10-5395 chr10 75136199 75136409 + 8.72 0.000 intron (NM_144660, intron 1 of 4) intron (NM_144660, intron 1 of 4) 24648 NM_001174156 142891 Hs.744986 NM_144660 ENSG00000156671 SAMD8 HEL-177|SMSr sterile alpha motif domain containing 8 protein-coding chr11-8988 chr11 22552003 22552213 + 8.72 0.000 Intergenic L2a|LINE|L2 -60089 NR_120583 102723378 Hs.374255 NR_120583 ENSG00000255323 LINC01495 - long intergenic non-protein coding RNA 1495 ncRNA chr13-2293 chr13 30187026 30187236 + 8.72 0.000 Intergenic Intergenic -34057 NR_138041 102157400 Hs.639879 NR_138041 LINC00384 - long intergenic non-protein coding RNA 384 ncRNA chrX-1035 chrX 90193460 90193670 + 8.72 0.000 Intergenic L1PA7|LINE|L1 271657 NM_138960 90316 Hs.592220 NM_138960 ENSG00000153779 TGIF2LX TGIFLX TGFB induced factor homeobox 2 like X-linked protein-coding chr5-5829 chr5 178076081 178076291 + 8.72 0.000 Intergenic Intergenic -37346 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr1-9995 chr1 84266962 84267172 + 8.72 0.000 Intergenic L2a|LINE|L2 -31471 NM_001010971 148418 Hs.591445 NM_001010971 ENSG00000203943 SAMD13 HSD-41|HSD-42 sterile alpha motif domain containing 13 protein-coding chr1-9338 chr1 28420522 28420732 + 8.72 0.000 intron (NM_001350160, intron 3 of 14) AluJb|SINE|Alu -17523 NM_023923 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr7-5661 chr7 57179846 57180056 + 8.72 0.000 non-coding (NR_030766, exon 1 of 4) non-coding (NR_030766, exon 1 of 4) 205 NR_030766 642006 Hs.562648 NR_030766 GUSBP10 - GUSB pseudogene 10 pseudo chr2-10546 chr2 236918987 236919197 + 8.72 0.000 Intergenic Intergenic 137075 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr2-7183 chr2 208491336 208491546 + 8.72 0.000 intron (NM_005048, intron 12 of 12) LTR19B|LTR|ERV1 -51201 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr22-3658 chr22 22772645 22772855 + 8.72 0.000 Intergenic Intergenic -50026 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr7-8017 chr7 18159470 18159680 + 8.72 0.000 intron (NM_001204144, intron 1 of 12) intron (NM_001204144, intron 1 of 12) -32266 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr16-4267 chr16 24141557 24141767 + 8.72 0.000 intron (NM_002738, intron 9 of 16) intron (NM_002738, intron 9 of 16) -61454 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr17-2400 chr17 80931872 80932082 + 8.72 0.000 intron (NM_020761, intron 24 of 33) L1MCc|LINE|L1 39236 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr11-9162 chr11 34863355 34863565 + 8.72 0.000 Intergenic Intergenic -52670 NM_001166158 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding chr16-6156 chr16 23366518 23366728 + 8.72 0.000 intron (NM_000336, intron 4 of 12) AluSx1|SINE|Alu 64321 NM_000336 6338 Hs.414614 NM_000336 ENSG00000168447 SCNN1B BESC1|ENaCb|ENaCbeta|LIDLS1|SCNEB sodium channel epithelial 1 beta subunit protein-coding chr8-4454 chr8 115467569 115467779 + 8.72 0.000 intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 200339 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr9-4436 chr9 16949746 16949956 + 8.72 0.000 Intergenic AluSq2|SINE|Alu -79181 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr2-13975 chr2 189318801 189319011 + 8.72 0.000 Intergenic Intergenic -122527 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr15-4441 chr15 45732257 45732467 + 8.72 0.000 intron (NR_135680, intron 1 of 4) MER45B|DNA|hAT-Tip100 27167 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr12-7973 chr12 110585232 110585442 + 8.72 0.000 Intergenic Intergenic -2019 NM_139283 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr7-5085 chr7 2483996 2484206 + 8.72 0.000 Intergenic Charlie5|DNA|hAT-Charlie -7718 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr7-5664 chr7 57256576 57256786 + 8.72 0.000 Intergenic CpG -34507 NR_136269 105375297 Hs.586309 NR_136269 ENSG00000234089 LOC105375297 - uncharacterized LOC105375297 ncRNA chr1-15380 chr1 150784886 150785096 + 8.72 0.000 Intergenic Intergenic -19213 NM_004079 1520 Hs.181301 NM_004079 ENSG00000163131 CTSS - cathepsin S protein-coding chr12-7429 chr12 60174625 60174835 + 8.72 0.000 Intergenic Intergenic 485360 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr11-8441 chr11 111967116 111967326 + 8.72 0.000 intron (NM_001278542, intron 3 of 5) L2a|LINE|L2 -10088 NM_033425 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr22-2852 chr22 44691447 44691657 + 8.72 0.000 intron (NM_001198721, intron 2 of 9) AluSx|SINE|Alu -10646 NM_181334 553158 Hs.102336 NM_181334 ENSG00000248405 PRR5-ARHGAP8 - PRR5-ARHGAP8 readthrough protein-coding chr18-2127 chr18 54607410 54607620 + 8.72 0.000 Intergenic L2b|LINE|L2 16356 NM_173629 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr17-6931 chr17 42131979 42132189 + 8.72 0.000 intron (NM_001252039, intron 1 of 6) intron (NM_001252039, intron 1 of 6) 9280 NM_033194 94086 Hs.620611 NM_033194 ENSG00000260325 HSPB9 CT51 heat shock protein family B (small) member 9 protein-coding chr2-9291 chr2 221938992 221939202 + 8.72 0.000 Intergenic Intergenic -359050 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr2-4906 chr2 144712607 144712817 + 8.72 0.000 intron (NR_033870, intron 1 of 4) Eulor4|Unknown|Unknown 44745 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr20-4222 chr20 47766098 47766308 + 8.72 0.000 intron (NM_198596, intron 1 of 20) intron (NM_198596, intron 1 of 20) 19861 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr22-1990 chr22 23009611 23009821 + 8.72 0.000 Intergenic PABL_A|LTR|ERV1 -60803 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr6-4613 chr6 45154662 45154872 + 8.72 0.000 intron (NM_001350325, intron 2 of 10) LTR48|LTR|ERV1 43003 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chrX-3699 chrX 111046347 111046557 + 8.72 0.000 intron (NM_001128166, intron 2 of 15) MIRc|SINE|MIR -49739 NM_001324326 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr1-10350 chr1 154355667 154355877 + 8.72 0.000 Intergenic Intergenic 26974 NM_001367934 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr11-3060 chr11 9972957 9973167 + 8.72 0.000 intron (NM_030962, intron 13 of 39) intron (NM_030962, intron 13 of 39) 133920 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr15-1562 chr15 69653959 69654169 + 8.72 0.000 intron (NR_126437, intron 3 of 5) intron (NR_126437, intron 3 of 5) 61864 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr10-5562 chr10 88767648 88767858 + 8.72 0.000 intron (NM_001102469, intron 4 of 8) intron (NM_001102469, intron 4 of 8) 6347 NM_001102469 643418 Hs.632091 NM_001102469 ENSG00000204020 LIPN ARCI8|LI4|LIPL4|bA186O14.3 lipase family member N protein-coding chr15-3113 chr15 65087595 65087805 + 8.72 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 10884 NM_001101362 390594 Hs.586890 NM_001101362 ENSG00000234438 KBTBD13 HCG1645727|NEM6 kelch repeat and BTB domain containing 13 protein-coding chr7-5084 chr7 2468509 2468719 + 8.72 0.000 Intergenic Intergenic 7769 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr4-7497 chr4 73637375 73637585 + 8.72 0.000 Intergenic L1PB3|LINE|L1 -16849 NM_001270392 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr16-2345 chr16 50272066 50272276 + 8.72 0.000 intron (NM_001114, intron 1 of 25) intron (NM_001114, intron 1 of 25) 5620 NM_001286057 113 Hs.513578 NM_001114 ENSG00000121281 ADCY7 AC7 adenylate cyclase 7 protein-coding chr1-2946 chr1 67801931 67802141 + 8.72 0.000 intron (NM_018841, intron 1 of 3) intron (NM_018841, intron 1 of 3) -30252 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12, DIRAS3 and WLS antisense RNA 1 ncRNA chr2-8662 chr2 148566472 148566682 + 8.72 0.000 Intergenic Intergenic -78174 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr14-2346 chr14 20302220 20302430 + 8.72 0.000 intron (NM_138376, intron 1 of 9) intron (NM_138376, intron 1 of 9) 3626 NM_138376 91875 Hs.98553 NM_138376 ENSG00000136319 TTC5 Strap tetratricopeptide repeat domain 5 protein-coding chr5-4739 chr5 45337593 45337803 + 8.72 0.000 intron (NM_021072, intron 5 of 7) L2c|LINE|L2 358682 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr4-5498 chr4 81136280 81136490 + 8.72 0.000 intron (NM_006259, intron 13 of 18) MER5B|DNA|hAT-Charlie 17772 NM_001282480 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding chr10-6036 chr10 126839971 126840181 + 8.72 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -65333 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr7-3486 chr7 2492096 2492306 + 8.72 0.000 Intergenic (CCAT)n|Simple_repeat|Simple_repeat -15818 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr3-2858 chr3 37561803 37562013 + 8.72 0.000 intron (NM_002207, intron 15 of 27) intron (NM_002207, intron 15 of 27) 109767 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr11-8027 chr11 16382441 16382651 + 8.72 0.000 intron (NM_001367872, intron 3 of 16) intron (NM_001367872, intron 3 of 16) 20317 NM_001145819 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr6-7319 chr6 44934464 44934674 + 8.72 0.000 intron (NM_181356, intron 11 of 12) MLT1A0|LTR|ERVL-MaLR 263201 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr5-6033 chr5 166511224 166511434 + 8.72 0.000 Intergenic Intergenic 415041 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr18-2491 chr18 51413312 51413522 + 8.72 0.000 intron (NR_040074, intron 1 of 2) intron (NR_040074, intron 1 of 2) 21375 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr7-4716 chr7 48995688 48995898 + 8.72 0.000 Intergenic MER89-int|LTR|ERV1 71246 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr10-7192 chr10 110764468 110764678 + 8.72 0.000 intron (NM_001134363, intron 1 of 13) intron (NM_001134363, intron 1 of 13) 106331 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr5-1960 chr5 81127909 81128119 + 8.72 0.000 intron (NM_006909, intron 17 of 26) L1MA7|LINE|L1 -105306 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr12-7046 chr12 39547978 39548188 + 8.72 0.000 Intergenic MER47B|DNA|TcMar-Tigger 71720 NM_005164 225 Hs.117852 NM_005164 ENSG00000173208 ABCD2 ABC39|ALDL1|ALDR|ALDRP|hALDR ATP binding cassette subfamily D member 2 protein-coding chr13-2094 chr13 77174382 77174592 + 8.72 0.000 exon (NM_015057, exon 37 of 83) exon (NM_015057, exon 37 of 83) 98973 NR_046716 100874212 Hs.569288 NR_046716 ENSG00000236051 MYCBP2-AS1 - MYCBP2 antisense RNA 1 ncRNA chr5-3873 chr5 139848927 139849137 + 8.72 0.000 intron (NM_013983, intron 10 of 10) intron (NM_013983, intron 10 of 10) 53224 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr20-1893 chr20 51469639 51469849 + 8.72 0.000 intron (NM_012340, intron 5 of 10) MLT1C|LTR|ERVL-MaLR -16767 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr16-2812 chr16 67514515 67514725 + 8.72 0.000 Intergenic Intergenic 14125 NR_104656 100505942 Hs.121233 NR_104656 LOC100505942 - uncharacterized LOC100505942 ncRNA chr1-8989 chr1 10384389 10384599 + 8.72 0.000 Intergenic L2a|LINE|L2 -14570 NM_001304451 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr10-4841 chr10 13885778 13885988 + 8.72 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 86013 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr16-6358 chr16 50718079 50718289 + 8.72 0.000 intron (NR_163434, intron 7 of 12) MER44D|DNA|TcMar-Tigger 18804 NM_001293557 64127 Hs.592072 NM_022162 ENSG00000167207 NOD2 ACUG|BLAU|BLAUS|CARD15|CD|CLR16.3|IBD1|NLRC2|NOD2B|PSORAS1|YAOS nucleotide binding oligomerization domain containing 2 protein-coding chr2-9496 chr2 236492162 236492372 + 8.72 0.000 intron (NR_073043, intron 3 of 19) L2c|LINE|L2 11430 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr9-8160 chr9 104719758 104719968 + 8.72 0.000 Intergenic L1PA4|LINE|L1 25441 NM_001004484 286365 Hs.553683 NM_001004484 ENSG00000179055 OR13D1 OR9-15 olfactory receptor family 13 subfamily D member 1 protein-coding chr1-10709 chr1 193283065 193283275 + 8.72 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -21575 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr6-1674 chr6 4369947 4370157 + 8.72 0.000 Intergenic Intergenic -118746 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr4-3051 chr4 140595170 140595380 + 8.72 0.000 Intergenic L1PA15-16|LINE|L1 -26314 NM_021833 7350 Hs.249211 NM_021833 ENSG00000109424 UCP1 SLC25A7|UCP uncoupling protein 1 protein-coding chr20-1169 chr20 63770357 63770567 + 8.72 0.000 intron (NM_001369741, intron 3 of 4) intron (NM_001369741, intron 3 of 4) 30686 NM_020062 56731 Hs.435126 NM_020062 ENSG00000125520 SLC2A4RG GEF|HDBP-1|HDBP1|Si-1-2|Si-1-2-19 SLC2A4 regulator protein-coding chr2-11260 chr2 175882080 175882290 + 8.72 0.000 Intergenic AluSz|SINE|Alu 120082 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr8-6909 chr8 102260038 102260248 + 8.72 0.000 intron (NM_001282873, intron 56 of 58) MER68B|LTR|ERVL 20692 NR_125415 101927221 Hs.492445 NR_125415 ENSG00000246263 UBR5-AS1 - UBR5 antisense RNA 1 ncRNA chr3-5871 chr3 35616578 35616788 + 8.72 0.000 Intergenic Zaphod|DNA|hAT-Tip100 -22842 NM_001267616 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr1-8396 chr1 79040853 79041063 + 8.72 0.000 Intergenic Intergenic -34228 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr8-4675 chr8 138814514 138814724 + 8.72 0.000 intron (NM_152888, intron 7 of 64) MLT1F2|LTR|ERVL-MaLR 99422 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr11-3050 chr11 8111089 8111299 + 8.72 0.000 intron (NM_001135109, intron 1 of 1) intron (NM_001135109, intron 1 of 1) 29832 NM_177972 7275 Hs.568986 NM_003320 ENSG00000166402 TUB RDOB|rd5 TUB bipartite transcription factor protein-coding GL000225.1-82 GL000225.1 2223 2433 + 8.72 0.000 NA NA NA NA chr22-2831 chr22 43679631 43679841 + 8.72 0.000 intron (NM_198856, intron 10 of 29) L1MB7|LINE|L1 132569 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr9-4022 chr9 73073699 73073909 + 8.72 0.000 Intergenic L1ME3A|LINE|L1 -78061 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr7-5820 chr7 83702187 83702397 + 8.72 0.000 Intergenic Intergenic -53153 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr2-6462 chr2 160916345 160916555 + 8.72 0.000 Intergenic Intergenic -220505 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr12-3342 chr12 90250100 90250310 + 8.72 0.000 Intergenic Intergenic -43113 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr17-3692 chr17 15645554 15645764 + 8.72 0.000 intron (NM_001348126, intron 4 of 8) intron (NM_001348126, intron 4 of 8) -25955 NM_001282540 374286 Hs.548021 NM_006382 ENSG00000241322 CDRT1 C170RF1|C17ORF1|C17ORF1A|FBXW10B|FBXW10P1|HREP|SM25H2 CMT1A duplicated region transcript 1 protein-coding chr6-7221 chr6 40290789 40290999 + 8.72 0.000 Intergenic Intergenic 65112 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr10-5457 chr10 79128673 79128883 + 8.72 0.000 intron (NM_020338, intron 2 of 24) intron (NM_020338, intron 2 of 24) 59812 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr2-9967 chr2 9469388 9469598 + 8.72 0.000 intron (NM_016207, intron 16 of 17) intron (NM_016207, intron 16 of 17) -5058 NM_001320859 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr3-6869 chr3 151869246 151869456 + 8.72 0.000 intron (NR_110203, intron 1 of 2) intron (NR_110203, intron 1 of 2) -4292 NM_033050 56670 Hs.133181 NM_033050 ENSG00000198829 SUCNR1 GPR91 succinate receptor 1 protein-coding chr17-7646 chr17 29329003 29329213 + 8.72 0.000 Intergenic AluJo|SINE|Alu -34960 NM_020772 57532 Hs.462598 NM_020772 ENSG00000108256 NUFIP2 182-FIP|82-FIP|FIP-82|PIG1 nuclear FMR1 interacting protein 2 protein-coding chr15-3197 chr15 71548329 71548539 + 8.72 0.000 intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 1198 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr5-4102 chr5 72657560 72657770 + 8.72 0.000 intron (NR_105007, intron 1 of 2) LTR16C|LTR|ERVL 3004 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr11-4233 chr11 64506663 64506873 + 8.72 0.000 Intergenic Intergenic -49173 NM_018484 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr17-5615 chr17 48928296 48928506 + 8.72 0.000 TTS (NM_001317192) TTS (NM_001317192) 16441 NM_001317192 11267 Hs.127249 NM_007241 ENSG00000159210 SNF8 Dot3|EAP30|VPS22 SNF8 subunit of ESCRT-II protein-coding chr19-4596 chr19 12755317 12755527 + 8.72 0.000 exon (NM_017682, exon 6 of 10) exon (NM_017682, exon 6 of 10) 3631 NM_017682 54831 Hs.435611 NM_017682 ENSG00000039987 BEST2 VMD2L1 bestrophin 2 protein-coding chrX-1880 chrX 129322059 129322269 + 8.72 0.000 Intergenic L1MA9|LINE|L1 201326 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr1-7576 chr1 211713310 211713520 + 8.72 0.000 Intergenic L1MB2|LINE|L1 37653 NR_148994 91548 Hs.367839 NR_148994 LOC91548 - uncharacterized LOC91548 ncRNA chr11-5258 chr11 31746428 31746638 + 8.72 0.000 intron (NM_001288726, intron 10 of 11) L1PA4|LINE|L1 54128 NM_001368930 5080 Hs.270303 NM_000280 ENSG00000007372 PAX6 AN|AN2|ASGD5|D11S812E|FVH1|MGDA|WAGR paired box 6 protein-coding chr3-7550 chr3 189458559 189458769 + 8.72 0.000 Intergenic Intergenic -138082 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr20-2964 chr20 34165007 34165217 + 8.72 0.000 Intergenic Intergenic -52869 NM_001316363 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr1-11913 chr1 54673546 54673756 + 8.72 0.000 intron (NM_001039464, intron 8 of 23) intron (NM_001039464, intron 8 of 23) 31865 NM_001039464 374977 Hs.412482 NM_198547 ENSG00000184313 MROH7 C1orf175|HEATR8 maestro heat like repeat family member 7 protein-coding chr15-836 chr15 41558917 41559127 + 8.72 0.000 promoter-TSS (NM_006293) promoter-TSS (NM_006293) -190 NM_006293 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr4-4767 chr4 99047728 99047938 + 8.72 0.000 intron (NM_015143, intron 8 of 10) intron (NM_015143, intron 8 of 10) 40955 NM_000671 128 Hs.78989 NM_000671 ENSG00000197894 ADH5 ADH-3|ADHX|FALDH|FDH|GSH-FDH|GSNOR|HEL-S-60p alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding chr11-4561 chr11 123690532 123690742 + 8.72 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -36030 NM_018400 55800 Hs.4865 NM_018400 ENSG00000166257 SCN3B ATFB16|BRGDA7|HSA243396|SCNB3 sodium voltage-gated channel beta subunit 3 protein-coding GL000194.1-4 GL000194.1 12675 12885 + 8.72 0.000 NA NA NA NA chr16-5578 chr16 47734706 47734916 + 8.72 0.000 Intergenic Intergenic -123770 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA chr2-5840 chr2 236695712 236695922 + 8.72 0.000 Intergenic Intergenic 125992 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr1-5900 chr1 9028039 9028249 + 8.72 0.000 Intergenic AluJb|SINE|Alu -1799 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr20-1978 chr20 43578289 43578499 + 8.72 0.000 intron (NM_170693, intron 11 of 12) AluSx1|SINE|Alu 12297 NM_016276 10110 Hs.300863 NM_016276 ENSG00000101049 SGK2 H-SGK2|dJ138B7.2 serum/glucocorticoid regulated kinase 2 protein-coding chr11-3048 chr11 7571825 7572035 + 8.72 0.000 intron (NM_003621, intron 3 of 23) intron (NM_003621, intron 3 of 23) -4837 NM_001351861 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr6-5744 chr6 152670980 152671190 + 8.72 0.000 Intergenic Intergenic -26810 NM_025107 80177 Hs.18160 NM_025107 ENSG00000120279 MYCT1 MTLC MYC target 1 protein-coding chr8-4299 chr8 97423196 97423406 + 8.72 0.000 intron (NR_125390, intron 1 of 2) intron (NR_125390, intron 1 of 2) 23196 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr1-10527 chr1 169418052 169418262 + 8.72 0.000 intron (NM_001300969, intron 4 of 5) L1ME4b|LINE|L1 9317 NM_021179 57821 Hs.567557 NM_021179 ENSG00000117477 CCDC181 C1orf114 coiled-coil domain containing 181 protein-coding chr17-5690 chr17 51086963 51087173 + 8.72 0.000 intron (NM_001130527, intron 1 of 29) intron (NM_001130527, intron 1 of 29) 33800 NM_001130528 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr9-1766 chr9 134299939 134300149 + 8.72 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -4647 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr1-11315 chr1 21488808 21489018 + 8.72 0.000 Intergenic Intergenic -20071 NM_001369805 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr17-6426 chr17 4919537 4919747 + 8.72 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -12635 NM_000173 2811 Hs.1472 NM_000173 ENSG00000185245 GP1BA BDPLT1|BDPLT3|BSS|CD42B|CD42b-alpha|DBPLT3|GP1B|GPIbA|GPIbalpha|VWDP glycoprotein Ib platelet subunit alpha protein-coding chr10-5786 chr10 105089301 105089511 + 8.72 0.000 intron (NM_014978, intron 5 of 26) intron (NM_014978, intron 5 of 26) -423190 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr8-3674 chr8 16182412 16182622 + 8.72 0.000 intron (NM_002445, intron 1 of 8) Tigger3b|DNA|TcMar-Tigger 3755 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr10-3515 chr10 71358514 71358724 + 8.72 0.000 intron (NM_001174098, intron 5 of 5) intron (NM_001174098, intron 5 of 5) -38301 NM_052836 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr8-1631 chr8 90701252 90701462 + 8.72 0.000 Intergenic MER58B|DNA|hAT-Charlie -55274 NM_001008495 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr10-1708 chr10 59709765 59709975 + 8.72 0.000 promoter-TSS (NM_001323978) promoter-TSS (NM_001323978) 21 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr1-15859 chr1 181667302 181667512 + 8.72 0.000 intron (NM_001205293, intron 7 of 47) intron (NM_001205293, intron 7 of 47) 183890 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr3-8551 chr3 148528729 148528939 + 8.72 0.000 Intergenic L2|LINE|L2 -169037 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr7-8544 chr7 55853852 55854062 + 8.72 0.000 intron (NM_207366, intron 2 of 9) AluJo|SINE|Alu 8795 NM_207366 346288 Hs.453629 NM_207366 ENSG00000154997 SEPTIN14 SEPT14 septin 14 protein-coding chr1-10545 chr1 171403518 171403728 + 8.72 0.000 Intergenic L1PB1|LINE|L1 64727 NR_002719 7151 Hs.661092 NR_002719 TOP1P1 - DNA topoisomerase I pseudogene 1 pseudo chr2-9561 chr2 240338273 240338483 + 8.72 0.000 Intergenic Intergenic -97285 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr16-2328 chr16 29854572 29854782 + 8.72 0.000 Intergenic AluJb|SINE|Alu 8549 NM_001286586 10423 Hs.121549 NM_006319 ENSG00000103502 CDIPT PIS|PIS1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase protein-coding chr2-10419 chr2 196166848 196167058 + 8.72 0.000 intron (NM_004226, intron 1 of 7) intron (NM_004226, intron 1 of 7) 4625 NM_004226 9262 Hs.88297 NM_004226 ENSG00000081320 STK17B DRAK2 serine/threonine kinase 17b protein-coding chr14-2993 chr14 52304682 52304892 + 8.72 0.000 Intergenic Intergenic -9525 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chr8-6387 chr8 54679056 54679266 + 8.72 0.000 Intergenic Intergenic 63065 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr12-5642 chr12 69063270 69063480 + 8.72 0.000 Intergenic L1ME4a|LINE|L1 -100135 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr3-6500 chr3 112605409 112605619 + 8.72 0.000 exon (NM_199511, exon 8 of 8) exon (NM_199511, exon 8 of 8) -3545 NR_109779 100506621 Hs.86538 NR_109779 LINC01279 - long intergenic non-protein coding RNA 1279 ncRNA chrX-2535 chrX 98715230 98715440 + 8.72 0.000 Intergenic L1PREC2|LINE|L1 -1150800 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr2-7068 chr2 167068672 167068882 + 8.72 0.000 intron (NM_152381, intron 2 of 10) MER30|DNA|hAT-Charlie 72178 NR_046665 100874011 NR_046665 XIRP2-AS1 - XIRP2 antisense RNA 1 ncRNA chr16-4107 chr16 2726908 2727118 + 8.72 0.000 Intergenic AluJo|SINE|Alu -6789 NM_031948 83886 Hs.332878 NM_031948 ENSG00000172382 PRSS27 CAPH2|MPN serine protease 27 protein-coding chr5-2889 chr5 100249909 100250119 + 8.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 138240 NR_027503 100133050 Hs.534796 NR_027503 LOC100133050 - glucuronidase beta pseudogene pseudo chr10-8939 chr10 116694441 116694651 + 8.72 0.000 intron (NM_001330164, intron 6 of 12) intron (NM_001330164, intron 6 of 12) -24264 NM_001330142 143379 Hs.121347 NM_144661 ENSG00000165863 C10orf82 - chromosome 10 open reading frame 82 protein-coding chr3-3504 chr3 13650479 13650689 + 8.72 0.000 promoter-TSS (NR_027103) promoter-TSS (NR_027103) -137 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr15-5082 chr15 86815535 86815745 + 8.72 0.000 intron (NM_152336, intron 23 of 24) intron (NM_152336, intron 23 of 24) -117240 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr5-4757 chr5 53023806 53024016 + 8.72 0.000 intron (NR_073107, intron 1 of 28) intron (NR_073107, intron 1 of 28) 34559 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr1-6130 chr1 161044757 161044967 + 8.72 0.000 intron (NM_007122, intron 1 of 10) intron (NM_007122, intron 1 of 10) 122 NM_001276373 7391 Hs.414880 NM_007122 ENSG00000158773 USF1 FCHL|FCHL1|HYPLIP1|MLTF|MLTFI|UEF|bHLHb11 upstream transcription factor 1 protein-coding chr9-8389 chr9 118809043 118809253 + 8.72 0.000 Intergenic LTR12C|LTR|ERV1 129477 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr10-4928 chr10 24263108 24263318 + 8.72 0.000 intron (NM_019590, intron 2 of 20) intron (NM_019590, intron 2 of 20) -12472 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr21-1239 chr21 45824761 45824971 + 8.72 0.000 intron (NM_001348243, intron 3 of 15) intron (NM_001348243, intron 3 of 15) 11553 NR_038876 100129027 Hs.689591 NR_038876 ENSG00000205424 LOC100129027 - uncharacterized LOC100129027 ncRNA chr12-1374 chr12 57591561 57591771 + 8.72 0.000 intron (NM_024779, intron 1 of 9) intron (NM_024779, intron 1 of 9) 474 NM_001146258 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr17-4053 chr17 78130513 78130723 + 8.72 0.000 promoter-TSS (NM_152468) promoter-TSS (NM_152468) -160 NM_152468 147138 Hs.592102 NM_152468 ENSG00000167895 TMC8 EV2|EVER2|EVIN2 transmembrane channel like 8 protein-coding chr20-3467 chr20 56012002 56012212 + 8.72 0.000 Intergenic Intergenic -6588 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr13-3817 chr13 46761116 46761326 + 8.72 0.000 Intergenic L2c|LINE|L2 35940 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr3-3190 chr3 187173781 187173991 + 8.72 0.000 Intergenic Intergenic -23600 NM_153708 132112 Hs.518480 NM_153708 ENSG00000175077 RTP1 Z3CXXC1 receptor transporter protein 1 protein-coding chr9-8676 chr9 130403618 130403828 + 8.72 0.000 intron (NM_001291815, intron 79 of 97) intron (NM_001291815, intron 79 of 97) -40984 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr11-4321 chr11 69982864 69983074 + 8.72 0.000 Intergenic Intergenic 80955 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr7-7985 chr7 15513633 15513843 + 8.72 0.000 intron (NM_001004320, intron 3 of 12) intron (NM_001004320, intron 3 of 12) 48277 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chr4-2252 chr4 161920910 161921120 + 8.72 0.000 intron (NM_001128428, intron 3 of 14) MIR|SINE|MIR -101718 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr8-4133 chr8 74281356 74281566 + 8.72 0.000 intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 39900 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr19-2209 chr19 38236250 38236460 + 8.72 0.000 Intergenic AluSz|SINE|Alu -6641 NM_001135156 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr20-1529 chr20 45946461 45946671 + 8.72 0.000 intron (NM_022104, intron 14 of 16) intron (NM_022104, intron 14 of 16) 11883 NM_022104 63935 Hs.472856 NM_022104 ENSG00000100982 PCIF1 C20orf67|CAPAM|PPP1R121|hCAPAM|hPCIF1 PDX1 C-terminal inhibiting factor 1 protein-coding chr1-15524 chr1 156866551 156866761 + 8.72 0.000 intron (NM_002529, intron 3 of 16) intron (NM_002529, intron 3 of 16) 5777 NM_002529 4914 Hs.406293 NM_002529 ENSG00000198400 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic receptor tyrosine kinase 1 protein-coding chr18-3462 chr18 69052947 69053157 + 8.72 0.000 intron (NM_001093729, intron 9 of 9) MER2|DNA|TcMar-Tigger 254972 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr4-4140 chr4 7764752 7764962 + 8.72 0.000 intron (NM_198595, intron 16 of 16) AluJr|SINE|Alu 10767 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr5-2434 chr5 125023803 125024013 + 8.72 0.000 Intergenic Intergenic -12923 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr3-3884 chr3 41525480 41525690 + 8.72 0.000 intron (NR_136342, intron 30 of 34) intron (NR_136342, intron 30 of 34) 326080 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr9-3774 chr9 125835789 125835999 + 8.72 0.000 intron (NR_024122, intron 2 of 7) L1MA4|LINE|L1 87711 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr11-10158 chr11 92967762 92967972 + 8.72 0.000 Intergenic L2|LINE|L2 -1756 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr20-3673 chr20 12293227 12293437 + 8.72 0.000 Intergenic Intergenic 375439 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chrX-1097 chrX 9892027 9892237 + 8.72 0.000 intron (NM_001649, intron 3 of 9) AluJo|SINE|Alu -20240 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr8-1702 chr8 108890561 108890771 + 8.72 0.000 Intergenic Intergenic -103072 NR_136411 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr11-4492 chr11 111851778 111851988 + 8.72 0.000 intron (NR_147984, intron 8 of 15) intron (NR_147984, intron 8 of 15) 19398 NM_001352419 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chr19-5336 chr19 3836960 3837170 + 8.72 0.000 intron (NM_015174, intron 1 of 18) intron (NM_015174, intron 1 of 18) 31973 NM_015174 23217 Hs.65750 NM_015174 ENSG00000105278 ZFR2 KIAA1086 zinc finger RNA binding protein 2 protein-coding chr4-5978 chr4 179849622 179849832 + 8.72 0.000 Intergenic Intergenic 1309422 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr9-4592 chr9 96555120 96555330 + 8.72 0.000 intron (NR_147239, intron 4 of 14) MLT1F|LTR|ERVL-MaLR 11606 NM_001351568 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr4-4971 chr4 131654150 131654360 + 8.72 0.000 Intergenic Intergenic -110583 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr6-4070 chr6 138697003 138697213 + 8.72 0.000 non-coding (NR_033896, exon 4 of 4) non-coding (NR_033896, exon 4 of 4) 5440 NR_033896 441172 Hs.92290 NR_033896 FLJ46906 - uncharacterized LOC441172 ncRNA chr20-3665 chr20 11592066 11592276 + 8.72 0.000 Intergenic L1M5|LINE|L1 278544 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr9-3648 chr9 93860840 93861050 + 8.72 0.000 Intergenic CpG 41588 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA chr6-8091 chr6 125594874 125595084 + 8.72 0.000 Intergenic Intergenic -79374 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr14-5127 chr14 89995331 89995541 + 8.72 0.000 intron (NM_001008744, intron 13 of 15) intron (NM_001008744, intron 13 of 15) 39509 NM_001330205 55775 Hs.209945 NM_018319 ENSG00000042088 TDP1 - tyrosyl-DNA phosphodiesterase 1 protein-coding chr11-7089 chr11 122159689 122159899 + 8.72 0.000 intron (NR_024430, intron 2 of 3) intron (NR_024430, intron 2 of 3) -2681 NR_137186 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr17-3935 chr17 59761832 59762042 + 8.72 0.000 intron (NM_001329401, intron 4 of 9) L1MEc|LINE|L1 54283 NM_001329399 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding chr1-6415 chr1 12636703 12636913 + 8.72 0.000 Intergenic Intergenic -7739 NM_001013630 343066 Hs.209954 NM_001013630 ENSG00000204518 AADACL4 - arylacetamide deacetylase like 4 protein-coding chr3-9606 chr3 56829304 56829514 + 8.72 0.000 intron (NM_001128615, intron 4 of 12) intron (NM_001128615, intron 4 of 12) -27460 NM_019555 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr2-14500 chr2 227360436 227360646 + 8.72 0.000 Intergenic Tigger4|DNA|TcMar-Tigger 18765 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr4-7311 chr4 54619986 54620196 + 8.72 0.000 Intergenic MER45B|DNA|hAT-Tip100 -12960 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr21-1003 chr21 15639218 15639428 + 8.72 0.000 Intergenic Intergenic -90611 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr9-5624 chr9 119030467 119030677 + 8.72 0.000 Intergenic Intergenic 338863 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr2-12442 chr2 58580627 58580837 + 8.72 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 59979 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr14-2919 chr14 40086025 40086235 + 8.72 0.000 Intergenic L1PA7|LINE|L1 -653630 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr2-8842 chr2 172984285 172984495 + 8.72 0.000 intron (NM_001282901, intron 5 of 24) intron (NM_001282901, intron 5 of 24) 56185 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr9-7084 chr9 127689067 127689277 + 8.72 0.000 intron (NM_003165, intron 19 of 19) intron (NM_003165, intron 19 of 19) 1623 NR_037473 100500872 NR_037473 ENSG00000283874 MIR3911 mir-3911 microRNA 3911 ncRNA chr16-3901 chr16 77368847 77369057 + 8.72 0.000 intron (NM_199355, intron 3 of 22) intron (NM_199355, intron 3 of 22) 66082 NM_199355 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr2-8521 chr2 129907038 129907248 + 8.72 0.000 Intergenic Intergenic -16034 NR_110285 101927924 Hs.570248 NR_110285 ENSG00000237574 LINC01856 - long intergenic non-protein coding RNA 1856 ncRNA chr12-3546 chr12 132954495 132954705 + 8.72 0.000 intron (NM_183238, intron 1 of 4) intron (NM_183238, intron 1 of 4) 1706 NM_183238 100289635 Hs.29698 NM_183238 ENSG00000196458 ZNF605 - zinc finger protein 605 protein-coding chr12-6393 chr12 71414414 71414624 + 8.72 0.000 Intergenic L1PB2|LINE|L1 -25279 NM_001277226 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding chr11-3357 chr11 122575382 122575592 + 8.72 0.000 Intergenic MER58B|DNA|hAT-Charlie -80235 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr15-4029 chr15 61014646 61014856 + 8.72 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 214551 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr9-4435 chr9 16515898 16516108 + 8.72 0.000 intron (NM_001317939, intron 4 of 6) intron (NM_001317939, intron 4 of 6) -210811 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr18-1679 chr18 74836257 74836467 + 8.72 0.000 intron (NM_017757, intron 3 of 7) intron (NM_017757, intron 3 of 7) 205399 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr12-8042 chr12 114392192 114392402 + 8.72 0.000 intron (NM_000192, intron 6 of 8) L1MA10|LINE|L1 13847 NM_181486 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box transcription factor 5 protein-coding chr10-2217 chr10 60943279 60943489 + 8.72 0.000 promoter-TSS (NR_160732) promoter-TSS (NR_160732) 801 NM_014836 9886 Hs.737374 NM_014836 ENSG00000072422 RHOBTB1 - Rho related BTB domain containing 1 protein-coding chr11-10012 chr11 80152984 80153194 + 8.72 0.000 Intergenic L3|LINE|CR1 609714 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr16-5517 chr16 20373335 20373545 + 8.72 0.000 intron (NM_174924, intron 5 of 11) LTR16B2|LTR|ERVL -20562 NM_003361 7369 Hs.654425 NM_003361 ENSG00000169344 UMOD ADMCKD2|FJHN|HNFJ|HNFJ1|MCKD2|THGP|THP uromodulin protein-coding chr9-3308 chr9 86072780 86072990 + 8.72 0.000 intron (NM_016548, intron 3 of 9) Tigger3a|DNA|TcMar-Tigger 26673 NM_016548 51280 Hs.494337 NM_016548 ENSG00000135052 GOLM1 C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 golgi membrane protein 1 protein-coding chr17-4447 chr17 49985553 49985763 + 8.72 0.000 Intergenic Intergenic 9566 NM_005220 1747 Hs.134194 NM_005220 ENSG00000064195 DLX3 AI4|TDO distal-less homeobox 3 protein-coding chr6-3585 chr6 73319249 73319459 + 8.72 0.000 Intergenic L1MC3|LINE|L1 -8989 NR_027005 80759 Hs.433062 NM_030568 ENSG00000135314 KHDC1 C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4 KH domain containing 1 protein-coding chr10-5315 chr10 70927514 70927724 + 8.72 0.000 Intergenic Intergenic -11434 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr2-12983 chr2 105374888 105375098 + 8.72 0.000 intron (NM_001450, intron 2 of 5) intron (NM_001450, intron 2 of 5) 24058 NM_001450 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr11-4553 chr11 122207882 122208092 + 8.72 0.000 intron (NR_137180, intron 2 of 4) intron (NR_137180, intron 2 of 4) -4878 NR_137182 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr13-2154 chr13 110029093 110029303 + 8.72 0.000 Intergenic L1ME4a|LINE|L1 -24087 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr15-3013 chr15 56320463 56320673 + 8.72 0.000 Intergenic Intergenic -44856 NM_198524 374618 Hs.511476 NM_198524 ENSG00000151575 TEX9 - testis expressed 9 protein-coding chr2-11632 chr2 5167320 5167530 + 8.72 0.000 Intergenic L1PA8|LINE|L1 -511203 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr1-7565 chr1 204150864 204151074 + 8.72 0.000 intron (NM_001297762, intron 1 of 6) intron (NM_001297762, intron 1 of 6) 1075 NM_001297761 55224 Hs.497469 NM_018208 ENSG00000143845 ETNK2 EKI2|HMFT1716 ethanolamine kinase 2 protein-coding chr2-9049 chr2 200082932 200083142 + 8.72 0.000 Intergenic MER91A|DNA|hAT-Tip100 -127546 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr18-3089 chr18 34090454 34090664 + 8.72 0.000 intron (NM_001353233, intron 5 of 11) L2|LINE|L2 -41947 NM_001198549 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr6-4259 chr6 9139880 9140090 + 8.72 0.000 Intergenic Intergenic 487776 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr10-4527 chr10 93409908 93410118 + 8.72 0.000 intron (NM_013451, intron 5 of 53) intron (NM_013451, intron 5 of 53) 72321 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chrX-1461 chrX 102769152 102769362 + 8.72 0.000 non-coding (NR_038988, exon 1 of 8) non-coding (NR_038988, exon 1 of 8) 104 NR_146592 100287765 Hs.556850 NR_038988 LINC00630 - long intergenic non-protein coding RNA 630 ncRNA chr1-10271 chr1 145714842 145715052 + 8.72 0.000 Intergenic Intergenic -4552 NM_007053 11126 Hs.488237 NM_007053 ENSG00000117281 CD160 BY55|NK1|NK28 CD160 molecule protein-coding chr20-3370 chr20 33312002 33312212 + 8.72 0.000 Intergenic Intergenic 28893 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr7-8397 chr7 45416988 45417198 + 8.72 0.000 Intergenic L1MB3|LINE|L1 -157047 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr5-1771 chr5 17317031 17317241 + 8.72 0.000 Intergenic Intergenic 70174 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LINC02111 - long intergenic non-protein coding RNA 2111 ncRNA chrX-4502 chrX 65422217 65422427 + 8.72 0.000 Intergenic ERVL-B4-int|LTR|ERVL -66413 NM_001010888 340554 Hs.21249 NM_001010888 ENSG00000102053 ZC3H12B CXorf32|MCPIP2 zinc finger CCCH-type containing 12B protein-coding chr6-5528 chr6 167327582 167327792 + 8.72 0.000 intron (NM_031949, intron 1 of 2) intron (NM_031949, intron 1 of 2) 2601 NM_031949 83887 Hs.520554 NM_031949 ENSG00000120440 TTLL2 C6orf104|NYD-TSPG|dJ366N23.3 tubulin tyrosine ligase like 2 protein-coding chr10-3338 chr10 12430272 12430482 + 8.72 0.000 intron (NM_001351032, intron 3 of 11) intron (NM_001351032, intron 3 of 11) 41395 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr3-8494 chr3 128944454 128944664 + 8.72 0.000 intron (NM_001348520, intron 9 of 14) intron (NM_001348520, intron 9 of 14) 47338 NM_001348523 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr2-12916 chr2 100626941 100627151 + 8.72 0.000 Intergenic Intergenic 23307 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr4-2918 chr4 88461775 88461985 + 8.72 0.000 intron (NM_016323, intron 3 of 22) intron (NM_016323, intron 3 of 22) 4761 NM_016323 51191 Hs.26663 NM_016323 ENSG00000138646 HERC5 CEB1|CEBP1 HECT and RLD domain containing E3 ubiquitin protein ligase 5 protein-coding chr2-9147 chr2 211236750 211236960 + 8.72 0.000 Intergenic Intergenic 619284 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr10-5300 chr10 69963787 69963997 + 8.72 0.000 Intergenic Intergenic -88954 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr13-3398 chr13 91666213 91666423 + 8.72 0.000 intron (NM_004466, intron 2 of 7) intron (NM_004466, intron 2 of 7) 267697 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr16-5493 chr16 9846030 9846240 + 8.72 0.000 intron (NM_001134408, intron 5 of 13) (AATCATG)n|Simple_repeat|Simple_repeat 335932 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr16-3664 chr16 88798930 88799140 + 8.72 0.000 Intergenic Intergenic -4754 NM_030928 81620 Hs.122908 NM_030928 ENSG00000167513 CDT1 DUP|RIS2 chromatin licensing and DNA replication factor 1 protein-coding chr4-4112 chr4 6579645 6579855 + 8.72 0.000 intron (NM_001292038, intron 3 of 18) (CCATCA)n|Simple_repeat|Simple_repeat 4561 NM_015274 23324 Hs.188464 NM_015274 ENSG00000013288 MAN2B2 - mannosidase alpha class 2B member 2 protein-coding chr4-7329 chr4 56443905 56444115 + 8.72 0.000 intron (NM_006452, intron 3 of 9) intron (NM_006452, intron 3 of 9) 7750 NM_001079525 10606 Hs.518774 NM_006452 ENSG00000128050 PAICS ADE2|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase protein-coding chr2-4341 chr2 240319576 240319786 + 8.72 0.000 Intergenic Intergenic -115982 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr11-10243 chr11 101061698 101061908 + 8.72 0.000 intron (NM_001271161, intron 3 of 6) intron (NM_001271161, intron 3 of 6) 67260 NM_001271161 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr3-11108 chr3 186069039 186069249 + 8.72 0.000 intron (NM_004454, intron 7 of 12) intron (NM_004454, intron 7 of 12) 39945 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr22-3115 chr22 19226510 19226720 + 8.72 0.000 intron (NM_007098, intron 11 of 32) intron (NM_007098, intron 11 of 32) -47752 NR_046298 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CMS23|CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr11-4858 chr11 30266717 30266927 + 8.72 0.000 Intergenic L1PA4|LINE|L1 35808 NM_001018080 2488 Hs.36975 NM_000510 ENSG00000131808 FSHB HH24 follicle stimulating hormone subunit beta protein-coding chr1-8556 chr1 165895836 165896046 + 8.72 0.000 intron (NM_012474, intron 3 of 6) intron (NM_012474, intron 3 of 6) -11980 NR_037431 100500832 NR_037431 ENSG00000283936 MIR3658 - microRNA 3658 ncRNA chr12-4501 chr12 22115682 22115892 + 8.72 0.000 Intergenic LTR1B|LTR|ERV1 69569 NM_018686 55907 Hs.311346 NM_018686 ENSG00000111726 CMAS CSS cytidine monophosphate N-acetylneuraminic acid synthetase protein-coding chr17-6295 chr17 45076414 45076624 + 8.72 0.000 intron (NM_021079, intron 1 of 11) AluSq2|SINE|Alu 15202 NM_021079 4836 Hs.532790 NM_021079 ENSG00000136448 NMT1 NMT N-myristoyltransferase 1 protein-coding chr3-8705 chr3 187319314 187319524 + 8.72 0.000 Intergenic Intergenic -27397 NM_001031849 5648 Hs.89983 NM_001879 ENSG00000127241 MASP1 3MC1|CRARF|CRARF1|MAP1|MASP|MASP3|MAp44|PRSS5|RaRF mannan binding lectin serine peptidase 1 protein-coding chr2-7952 chr2 62192438 62192648 + 8.72 0.000 Intergenic L2b|LINE|L2 -3572 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr9-8820 chr9 134954462 134954672 + 8.72 0.000 Intergenic L1MB8|LINE|L1 -36655 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr12-3819 chr12 74641660 74641870 + 8.72 0.000 Intergenic L1PA13|LINE|L1 103930 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr16-3596 chr16 74462386 74462596 + 8.72 0.000 exon (NM_012201, exon 21 of 27) exon (NM_012201, exon 21 of 27) -41021 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr5-8432 chr5 128257049 128257259 + 8.72 0.000 TTS (NM_001999) TTS (NM_001999) 173388 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr6-3641 chr6 132320113 132320323 + 8.72 0.000 intron (NM_015529, intron 9 of 11) L1ME3E|LINE|L1 81257 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr1-8955 chr1 9137384 9137594 + 8.72 0.000 Intergenic Intergenic -8387 NM_024980 80045 Hs.632367 NM_024980 ENSG00000180758 GPR157 - G protein-coupled receptor 157 protein-coding chr1-15789 chr1 175881806 175882016 + 8.72 0.000 Intergenic Intergenic 4568 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr9-5086 chr9 34503560 34503770 + 8.72 0.000 intron (NM_001281428, intron 12 of 19) intron (NM_001281428, intron 12 of 19) 19325 NM_198573 375704 Hs.522085 NM_198573 ENSG00000168913 ENHO C9orf165|UNQ470 energy homeostasis associated protein-coding chr3-5842 chr3 32621249 32621459 + 8.72 0.000 Intergenic Intergenic -50430 NM_001329135 51143 Hs.529495 NM_016141 ENSG00000144635 DYNC1LI1 DLC-A|DNCLI1|LIC1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding chr20-3732 chr20 17736591 17736801 + 8.72 0.000 TTS (NM_178477) TTS (NM_178477) 36748 NM_178477 140836 Hs.115366 NM_178477 ENSG00000125888 BANF2 BAF-L|BAF2|BAFL|C20orf179 barrier to autointegration factor 2 protein-coding chr3-4345 chr3 182692665 182692875 + 8.72 0.000 Intergenic MER65A|LTR|ERV1 -100734 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr8-6218 chr8 37710286 37710496 + 8.72 0.000 Intergenic Intergenic -7188 NR_125820 101929622 Hs.127775 NR_125820 LOC101929622 - uncharacterized LOC101929622 ncRNA chr10-4380 chr10 44564854 44565064 + 8.72 0.000 Intergenic Intergenic -179862 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr20-2710 chr20 47942873 47943083 + 8.72 0.000 Intergenic Intergenic -40248 NR_109942 101060004 Hs.129970 NR_109942 LINC01523 - long intergenic non-protein coding RNA 1523 ncRNA chr3-5256 chr3 108555058 108555268 + 8.72 0.000 intron (NM_020890, intron 17 of 20) intron (NM_020890, intron 17 of 20) -25841 NM_014981 22989 Hs.731060 NM_014981 ENSG00000144821 MYH15 - myosin heavy chain 15 protein-coding chr9-7096 chr9 128670026 128670236 + 8.72 0.000 Intergenic AluSz6|SINE|Alu -13281 NM_052844 89891 Hs.495240 NM_052844 ENSG00000119333 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding chr3-5900 chr3 39176080 39176290 + 8.72 0.000 Intergenic L2a|LINE|L2 16410 NM_194293 165904 Hs.447868 NM_194293 ENSG00000168334 XIRP1 CMYA1|Xin xin actin binding repeat containing 1 protein-coding chr9-5128 chr9 36464926 36465136 + 8.72 0.000 Intergenic L1MB7|LINE|L1 -63833 NM_194330 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr11-7371 chr11 73357386 73357596 + 8.72 0.000 intron (NM_014786, intron 9 of 20) intron (NM_014786, intron 9 of 20) -18908 NM_152222 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr1-14904 chr1 83526537 83526747 + 8.72 0.000 Intergenic Intergenic 80588 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr1-15592 chr1 160655304 160655514 + 8.72 0.000 Intergenic MLT2B1|LTR|ERVL -8098 NM_001330754 6504 Hs.523660 NM_003037 ENSG00000117090 SLAMF1 CD150|CDw150|SLAM signaling lymphocytic activation molecule family member 1 protein-coding chr8-7203 chr8 125753497 125753707 + 8.72 0.000 Intergenic L2a|LINE|L2 197595 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr8-4783 chr8 144047827 144048037 + 8.72 0.000 TTS (NM_001134374) TTS (NM_001134374) -1466 NR_158554 392275 NR_158554 SMPD5 MA-nSMase sphingomyelin phosphodiesterase 5 pseudo chr9-5424 chr9 96266714 96266924 + 8.72 0.000 intron (NM_000197, intron 2 of 10) intron (NM_000197, intron 2 of 10) 20356 NR_146524 105376162 Hs.662614 NR_146524 ENSG00000232283 HSD17B3-AS1 - HSD17B3 antisense RNA 1 ncRNA chr2-8036 chr2 71174531 71174741 + 8.72 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 44002 NM_005791 10199 Hs.656208 NM_005791 ENSG00000124383 MPHOSPH10 CT90|MPP10|MPP10P|PPP1R106 M-phase phosphoprotein 10 protein-coding chr5-7639 chr5 51688486 51688696 + 8.72 0.000 Intergenic Intergenic 305143 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding chr4-8566 chr4 166934384 166934594 + 8.72 0.000 intron (NM_001204355, intron 2 of 8) AluY|SINE|Alu 299937 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr6-2646 chr6 169023534 169023744 + 8.72 0.000 Intergenic Intergenic 12004 NR_134622 101929460 Hs.355225 NR_134622 ENSG00000229720 LOC101929460 - uncharacterized LOC101929460 ncRNA chr6-4424 chr6 33486684 33486894 + 8.72 0.000 Intergenic L1M4|LINE|L1 32213 NM_152735 221504 Hs.591805 NM_152735 ENSG00000213588 ZBTB9 ZNF919 zinc finger and BTB domain containing 9 protein-coding chr3-4041 chr3 72318871 72319081 + 8.72 0.000 Intergenic Intergenic 127647 NM_012234 23429 Hs.7910 NM_012234 ENSG00000163602 RYBP AAP1|APAP-1|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding chr10-6359 chr10 129119658 129119868 + 8.72 0.000 Intergenic Intergenic 206930 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr8-7110 chr8 119036916 119037126 + 8.72 0.000 intron (NM_001324095, intron 1 of 7) LTR33|LTR|ERVL -30226 NM_006438 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding chr13-2646 chr13 79482362 79482572 + 8.72 0.000 intron (NM_019080, intron 1 of 7) intron (NM_019080, intron 1 of 7) -1236 NR_046685 100874208 Hs.602801 NR_046685 ENSG00000232132 NDFIP2-AS1 - NDFIP2 antisense RNA 1 ncRNA chr17-8021 chr17 50079832 50080042 + 8.72 0.000 intron (NM_002204, intron 21 of 25) intron (NM_002204, intron 21 of 25) -14800 NM_001199898 5164 Hs.256667 NM_002611 ENSG00000005882 PDK2 PDHK2|PDKII pyruvate dehydrogenase kinase 2 protein-coding chr2-4814 chr2 52867174 52867384 + 8.72 0.000 Intergenic Intergenic -164664 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr2-5631 chr2 190122518 190122728 + 8.72 0.000 Intergenic Intergenic -15154 NM_001042521 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding chr8-4934 chr8 105117260 105117470 + 8.72 0.000 Intergenic Intergenic -201073 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr16-3832 chr16 58694509 58694719 + 8.72 0.000 Intergenic AluSz|SINE|Alu -9844 NM_018231 55238 Hs.10499 NM_018231 ENSG00000103042 SLC38A7 SNAT7 solute carrier family 38 member 7 protein-coding chr6-6747 chr6 2751330 2751540 + 8.72 0.000 promoter-TSS (NM_001012418) promoter-TSS (NM_001012418) -513 NM_001012418 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr4-8532 chr4 163599669 163599879 + 8.72 0.000 intron (NM_017923, intron 1 of 3) MER5A|DNA|hAT-Charlie 13760 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chrX-3222 chrX 53434254 53434464 + 8.72 0.000 promoter-TSS (NM_001037811) promoter-TSS (NM_001037811) 17 NM_001037811 3028 Hs.171280 NM_004493 ENSG00000072506 HSD17B10 17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|HSD10MD|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1 hydroxysteroid 17-beta dehydrogenase 10 protein-coding chrX-2605 chrX 107166435 107166645 + 8.72 0.000 intron (NM_017681, intron 4 of 8) L1MD1|LINE|L1 39893 NM_017681 54830 Hs.163629 NM_017681 ENSG00000198088 NUP62CL - nucleoporin 62 C-terminal like protein-coding chr5-6426 chr5 155053489 155053699 + 8.72 0.000 Intergenic Intergenic 39839 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding KI270730.1-5 KI270730.1 93252 93462 + 8.72 0.000 NA NA NA NA chr18-2105 chr18 51070748 51070958 + 8.72 0.000 intron (NM_005359, intron 10 of 11) MER44B|DNA|TcMar-Tigger 40640 NM_005359 4089 Hs.75862 NM_005359 ENSG00000141646 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding chr13-2849 chr13 109744007 109744217 + 8.72 0.000 Intergenic Intergenic 15838 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr8-2185 chr8 117923850 117924060 + 8.72 0.000 intron (NM_000127, intron 1 of 10) MER117|DNA|hAT-Charlie -3042 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr13-3036 chr13 26820187 26820397 + 8.72 0.000 Intergenic MSTD|LTR|ERVL-MaLR -59506 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr4-4979 chr4 133399411 133399621 + 8.72 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 250222 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr11-10392 chr11 113442517 113442727 + 8.72 0.000 intron (NM_016574, intron 1 of 6) intron (NM_016574, intron 1 of 6) 7466 NR_036183 100422855 NR_036183 ENSG00000265140 MIR4301 - microRNA 4301 ncRNA chr8-3736 chr8 22166085 22166295 + 8.72 0.000 intron (NR_033404, intron 1 of 15) intron (NR_033404, intron 1 of 15) 818 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr18-1778 chr18 10964624 10964834 + 8.72 0.000 intron (NM_022068, intron 3 of 51) L1MB5|LINE|L1 184033 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr12-4972 chr12 76866133 76866343 + 8.72 0.000 exon (NM_001300965, exon 2 of 6) exon (NM_001300965, exon 2 of 6) 12781 NM_001300965 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr3-5207 chr3 76144024 76144234 + 8.72 0.000 Intergenic MLT2B4|LTR|ERVL -358580 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chrX-3385 chrX 154951568 154951778 + 8.72 0.000 intron (NM_000132, intron 12 of 25) intron (NM_000132, intron 12 of 25) -64215 NR_036260 100422977 NR_036260 ENSG00000221603 MIR1184-3 - microRNA 1184-3 ncRNA chrX-1090 chrX 3609926 3610136 + 8.72 0.000 intron (NM_005044, intron 8 of 8) intron (NM_005044, intron 8 of 8) -49456 NR_046643 100873944 NR_046643 ENSG00000236188 PRKX-AS1 - PRKX antisense RNA 1 ncRNA chr10-5140 chr10 51767293 51767503 + 8.72 0.000 intron (NM_001098512, intron 3 of 17) intron (NM_001098512, intron 3 of 17) -67803 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr4-6112 chr4 17288222 17288432 + 8.72 0.000 Intergenic Intergenic 32555 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr20-1519 chr20 38109771 38109981 + 8.72 0.000 Intergenic Intergenic 55394 NM_198951 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr11-8791 chr11 10654873 10655083 + 8.72 0.000 intron (NM_130385, intron 1 of 20) intron (NM_130385, intron 1 of 20) -2677 NM_001098579 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr4-8013 chr4 117239922 117240132 + 8.72 0.000 Intergenic MER52C|LTR|ERV1 120612 NR_147151 105377389 Hs.129401 NR_147151 ENSG00000224932 LINC02262 - long intergenic non-protein coding RNA 2262 ncRNA chr1-13610 chr1 9462143 9462353 + 8.72 0.000 Intergenic L1ME1|LINE|L1 -33252 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr18-3072 chr18 32507326 32507536 + 8.72 0.000 Intergenic MER76|LTR|ERVL -4232 NR_003558 441818 Hs.549773 NR_003558 ENSG00000260389 WBP11P1 HsT3017 WW domain binding protein 11 pseudogene 1 pseudo chr1-14539 chr1 51699509 51699719 + 8.72 0.000 intron (NM_148906, intron 2 of 22) L1MC4|LINE|L1 -30236 NM_148904 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr1-9105 chr1 17017715 17017925 + 8.72 0.000 TTS (NM_003000) TTS (NM_003000) -5892 NM_001141973 23400 Hs.128866 NM_022089 ENSG00000159363 ATP13A2 CLN12|HSA9947|KRPPD|PARK9|SPG78 ATPase cation transporting 13A2 protein-coding chr5-8904 chr5 156801096 156801306 + 8.72 0.000 Intergenic MER4CL34|LTR|ERV1 -49094 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr17-2448 chr17 31011360 31011570 + 8.72 0.000 intron (NM_001350579, intron 1 of 3) (AC)n|Simple_repeat|Simple_repeat 3181 NM_001350579 107984974 Hs.558901 NM_001350575 LOC107984974 - uncharacterized LOC107984974 protein-coding chr3-6504 chr3 112959126 112959336 + 8.72 0.000 intron (NM_138806, intron 1 of 7) intron (NM_138806, intron 1 of 7) 15872 NM_138806 131450 Hs.309158 NM_138806 ENSG00000163606 CD200R1 CD200R|HCRTR2|MOX2R|OX2R CD200 receptor 1 protein-coding chr12-3453 chr12 116126510 116126720 + 8.72 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) 22039 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr7-8904 chr7 93669818 93670028 + 8.72 0.000 Intergenic Intergenic -47005 NR_039796 100616206 NR_039796 ENSG00000265423 MIR4652 - microRNA 4652 ncRNA chr2-13672 chr2 163289085 163289295 + 8.72 0.000 Intergenic L1MA2|LINE|L1 446818 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr11-9346 chr11 46837093 46837303 + 8.72 0.000 intron (NM_001008938, intron 1 of 43) L1MC3|LINE|L1 9082 NM_001008938 9793 Hs.201253 NM_014756 ENSG00000175216 CKAP5 CHTOG|MSPS|TOG|TOGp|ch-TOG cytoskeleton associated protein 5 protein-coding chr7-3109 chr7 30263495 30263705 + 8.72 0.000 intron (NR_136267, intron 2 of 3) intron (NR_136267, intron 2 of 3) -20997 NM_147128 223082 Hs.263912 NM_147128 ENSG00000180233 ZNRF2 RNF202 zinc and ring finger 2 protein-coding chr12-7700 chr12 90357121 90357331 + 8.72 0.000 Intergenic LTR47A|LTR|ERVL 63908 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr1-5512 chr1 181142685 181142895 + 8.72 0.000 Intergenic Intergenic -31694 NR_125966 101928973 Hs.637822 NR_125966 ENSG00000237292 LINC01732 - long intergenic non-protein coding RNA 1732 ncRNA chr1-5293 chr1 214445690 214445900 + 8.72 0.000 intron (NM_005401, intron 3 of 18) UCON78|DNA|DNA 105807 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr2-5421 chr2 112947563 112947773 + 8.72 0.000 Intergenic L2|LINE|L2 -30338 NM_019618 56300 Hs.211238 NM_019618 ENSG00000136688 IL36G IL-1F9|IL-1H1|IL-1RP2|IL1E|IL1F9|IL1H1|IL1RP2 interleukin 36 gamma protein-coding chr17-3832 chr17 42850063 42850273 + 8.72 0.000 exon (NM_001158, exon 4 of 4) exon (NM_001158, exon 4 of 4) -1016 NM_001277731 8639 Hs.198241 NM_003734 ENSG00000131471 AOC3 HPAO|SSAO|VAP-1|VAP1 amine oxidase copper containing 3 protein-coding chr8-6543 chr8 68980936 68981146 + 8.72 0.000 intron (NR_039986, intron 2 of 4) intron (NR_039986, intron 2 of 4) 123149 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr8-1859 chr8 13726350 13726560 + 8.72 0.000 Intergenic Intergenic 96765 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr20-2443 chr20 25065857 25066067 + 8.72 0.000 Intergenic Intergenic -7780 NM_001252677 84532 Hs.529353 NM_032501 ENSG00000154930 ACSS1 ACAS2L|ACECS1|AceCS2L acyl-CoA synthetase short chain family member 1 protein-coding chr3-10730 chr3 155185767 155185977 + 8.72 0.000 Intergenic Intergenic -55073 NR_125399 101928190 Hs.121410 NR_125399 ENSG00000241336 LINC01487 - long intergenic non-protein coding RNA 1487 ncRNA chrX-5236 chrX 136576975 136577185 + 8.72 0.000 Intergenic Intergenic 26202 NR_030631 100126324 NR_030631 ENSG00000216060 MIR934 MIRN934|hsa-mir-934|mir-934 microRNA 934 ncRNA chr7-9350 chr7 129239590 129239800 + 8.72 0.000 intron (NM_001130720, intron 1 of 16) intron (NM_001130720, intron 1 of 16) 14665 NM_015328 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr11-8993 chr11 22924049 22924259 + 8.72 0.000 Intergenic LTR88a|LTR|Gypsy? -63680 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding chr16-5230 chr16 29720763 29720973 + 8.72 0.000 Intergenic AluJo|SINE|Alu 25122 NM_175900 283897 Hs.331095 NM_175900 ENSG00000185905 C16orf54 - chromosome 16 open reading frame 54 protein-coding chr9-5457 chr9 98408299 98408509 + 8.72 0.000 intron (NM_005458, intron 7 of 18) intron (NM_005458, intron 7 of 18) -152755 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr15-4325 chr15 40132308 40132518 + 8.72 0.000 Intergenic SATR1|Satellite|Satellite -23534 NM_001003940 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr4-4900 chr4 121624234 121624444 + 8.72 0.000 Intergenic Intergenic 72641 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr1-15732 chr1 171040152 171040362 + 8.72 0.000 intron (NM_001163629, intron 20 of 21) L1MA9|LINE|L1 -50648 NM_001319173 2328 Hs.445350 NM_006894 ENSG00000007933 FMO3 FMOII|TMAU|dJ127D3.1 flavin containing dimethylaniline monoxygenase 3 protein-coding chr12-2482 chr12 68808809 68809019 + 8.72 0.000 promoter-TSS (NM_001278462) promoter-TSS (NM_001278462) -103 NM_001367990 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding chr6-3401 chr6 75055270 75055480 + 8.72 0.000 Intergenic LTR33|LTR|ERVL 73407 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr8-4509 chr8 120748079 120748289 + 8.72 0.000 intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) -13069 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr19-6513 chr19 18380387 18380597 + 8.72 0.000 Intergenic Intergenic -5666 NM_004864 9518 Hs.616962 NM_004864 ENSG00000130513 GDF15 GDF-15|MIC-1|MIC1|NAG-1|PDF|PLAB|PTGFB growth differentiation factor 15 protein-coding chr14-2823 chr14 23379145 23379355 + 8.72 0.000 intron (NM_001288746, intron 4 of 5) intron (NM_001288746, intron 4 of 5) 2204 NM_001288745 116173 Hs.99272 NM_138460 ENSG00000166091 CMTM5 CKLFSF5 CKLF like MARVEL transmembrane domain containing 5 protein-coding chr14-1736 chr14 59228504 59228714 + 8.72 0.000 intron (NM_001270520, intron 1 of 24) intron (NM_001270520, intron 1 of 24) -34832 NM_014992 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr17-5150 chr17 8420527 8420737 + 8.72 0.000 Intergenic Intergenic -15252 NM_001330129 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr7-7909 chr7 6957634 6957844 + 8.72 0.000 Intergenic HERVE-int|LTR|ERV1 109306 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr1-13060 chr1 176205354 176205564 + 8.72 0.000 intron (NM_022457, intron 1 of 19) intron (NM_022457, intron 1 of 19) 1785 NM_001286644 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr6-3418 chr6 108324241 108324451 + 8.72 0.000 intron (NM_145315, intron 2 of 12) LTR78B|LTR|ERV1 29292 NR_136553 246269 Hs.259666 NM_145315 ENSG00000135537 AFG1L AFG1|LACE1|c222389 AFG1 like ATPase protein-coding chr11-9906 chr11 75132601 75132811 + 8.72 0.000 Intergenic L3|LINE|CR1 -18401 NM_001145212 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr15-2750 chr15 24765040 24765250 + 8.72 0.000 Intergenic L1MB2|LINE|L1 -58463 NM_001349460 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr22-2792 chr22 42428401 42428611 + 8.72 0.000 intron (NM_001371362, intron 3 of 7) AluSx|SINE|Alu 3853 NM_001318323 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr10-8181 chr10 71456140 71456350 + 8.72 0.000 intron (NM_052836, intron 3 of 12) intron (NM_052836, intron 3 of 12) 55675 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr19-6855 chr19 43394395 43394605 + 8.72 0.000 intron (NM_031451, intron 1 of 8) AluSc8|SINE|Alu 5889 NM_031451 83639 Hs.97978 NM_031451 ENSG00000131126 TEX101 CT131|GTPR867|NYD-SP8|PRO1884|SGRG|SPATA44|TES101RP testis expressed 101 protein-coding chr6-3939 chr6 85268185 85268395 + 8.72 0.000 Intergenic Intergenic 121896 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr15-3009 chr15 55792378 55792588 + 8.72 0.000 Intergenic Intergenic -49331 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chr6-6579 chr6 138314019 138314229 + 8.72 0.000 intron (NM_020340, intron 26 of 33) MSTD|LTR|ERVL-MaLR -63519 NM_001368163 110806279 NM_001368163 ENSG00000262543 SMIM28 - small integral membrane protein 28 protein-coding chr1-10201 chr1 112866154 112866364 + 8.72 0.000 Intergenic MER39|LTR|ERV1 -15616 NR_103746 100996702 Hs.632431 NR_103746 ENSG00000215866 LINC01356 - long intergenic non-protein coding RNA 1356 ncRNA chr15-5209 chr15 95471718 95471928 + 8.72 0.000 intron (NR_027133, intron 3 of 5) intron (NR_027133, intron 3 of 5) 38730 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr6-7504 chr6 63706054 63706264 + 8.72 0.000 exon (NM_015153, exon 11 of 15) exon (NM_015153, exon 11 of 15) 59633 NM_015153 23469 Hs.348921 NM_015153 ENSG00000118482 PHF3 - PHD finger protein 3 protein-coding chr11-9460 chr11 61674346 61674556 + 8.72 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat -5940 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr1-14970 chr1 89176204 89176414 + 8.72 0.000 promoter-TSS (NM_207398) promoter-TSS (NM_207398) -306 NM_207398 388646 Hs.591450 NM_207398 ENSG00000213512 GBP7 GBP4L guanylate binding protein 7 protein-coding chr14-4324 chr14 22426040 22426250 + 8.72 0.000 intron (NR_148364, intron 1 of 1) MIRb|SINE|MIR 6608 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr20-1899 chr20 58209722 58209932 + 8.72 0.000 Intergenic Intergenic 18826 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr22-2361 chr22 43860375 43860585 + 8.72 0.000 intron (NM_014351, intron 1 of 6) MIRb|SINE|MIR 2033 NM_014351 25830 Hs.189810 NM_014351 ENSG00000130540 SULT4A1 BR-STL-1|BRSTL1|DJ388M5.3|NST|SULTX3|hBR-STL-1 sulfotransferase family 4A member 1 protein-coding chr6-4465 chr6 35740040 35740250 + 8.72 0.000 intron (NM_145028, intron 3 of 5) intron (NM_145028, intron 3 of 5) 3113 NM_145028 221481 Hs.533066 NM_145028 ENSG00000157343 ARMC12 C6orf81 armadillo repeat containing 12 protein-coding chr2-11497 chr2 235758893 235759103 + 8.72 0.000 intron (NM_001037131, intron 6 of 17) AluSz6|SINE|Alu -241077 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr17-8069 chr17 51639542 51639752 + 8.72 0.000 intron (NM_001082533, intron 7 of 9) intron (NM_001082533, intron 7 of 9) 204220 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr15-1781 chr15 76866821 76867031 + 8.72 0.000 intron (NR_148227, intron 2 of 32) intron (NR_148227, intron 2 of 32) -4982 NM_001145923 49855 Hs.458986 NM_020843 ENSG00000140386 SCAPER IDDRP|MSTP063|ZNF291|Zfp291 S-phase cyclin A associated protein in the ER protein-coding chr10-6592 chr10 82670847 82671057 + 8.72 0.000 intron (NR_163253, intron 3 of 10) Arthur1C|DNA|hAT-Tip100 -438032 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chrX-1978 chrX 11111831 11112041 + 8.72 0.000 intron (NM_005333, intron 1 of 6) intron (NM_005333, intron 1 of 6) 604 NM_005333 3052 Hs.211571 NM_005333 ENSG00000004961 HCCS CCHL|LSDMCA1|MCOPS7|MLS holocytochrome c synthase protein-coding chr10-9085 chr10 125497355 125497565 + 8.72 0.000 Intergenic Intergenic -76911 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr7-5314 chr7 26097735 26097945 + 8.72 0.000 Intergenic Intergenic -54358 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr11-6899 chr11 105861594 105861804 + 8.72 0.000 intron (NR_046356, intron 3 of 16) AmnSINE1|SINE|5S-Deu-L2 160541 NM_032424 84437 Hs.266782 NM_032424 ENSG00000170903 MSANTD4 KIAA1826 Myb/SANT DNA binding domain containing 4 with coiled-coils protein-coding chr13-4194 chr13 90621897 90622107 + 8.72 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 128714 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr8-4041 chr8 61428687 61428897 + 8.72 0.000 intron (NM_173519, intron 3 of 5) MER8|DNA|TcMar-Tigger 140822 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr16-4484 chr16 57055867 57056077 + 8.72 0.000 intron (NM_032206, intron 26 of 47) intron (NM_032206, intron 26 of 47) -36611 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr11-8411 chr11 101336911 101337121 + 8.72 0.000 Intergenic Intergenic 182889 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr2-8594 chr2 139191428 139191638 + 8.72 0.000 Intergenic L2a|LINE|L2 294209 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr2-3940 chr2 62423248 62423458 + 8.72 0.000 Intergenic Intergenic 82842 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr7-5442 chr7 38235532 38235742 + 8.72 0.000 Intergenic MER5B|DNA|hAT-Charlie 38010 NM_001003806 445347 Hs.534032 NM_001003799 TARP CD3G|TCRG|TCRGC1|TCRGC2|TCRGV TCR gamma alternate reading frame protein protein-coding chr3-3096 chr3 138234799 138235009 + 8.72 0.000 intron (NM_213654, intron 7 of 12) intron (NM_213654, intron 7 of 12) 47373 NM_001267042 25852 Hs.744868 NM_014154 ENSG00000114098 ARMC8 GID5|HSPC056|S863-2|VID28 armadillo repeat containing 8 protein-coding chr3-7528 chr3 178518180 178518390 + 8.72 0.000 Intergenic L2b|LINE|L2 -18151 NM_181361 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr17-7849 chr17 41935815 41936025 + 8.72 0.000 intron (NM_001350319, intron 3 of 10) intron (NM_001350319, intron 3 of 10) 5303 NR_146621 83538 Hs.201134 NM_031421 ENSG00000204815 TTC25 - tetratricopeptide repeat domain 25 protein-coding chr3-4294 chr3 157544726 157544936 + 8.72 0.000 intron (NM_001099777, intron 1 of 4) Charlie22a|DNA|hAT-Charlie 1487 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr4-5125 chr4 151744670 151744880 + 8.72 0.000 intron (NM_001363341, intron 2 of 11) intron (NM_001363341, intron 2 of 11) 16232 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr20-1026 chr20 31063037 31063247 + 8.72 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -194522 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr6-7645 chr6 81617688 81617898 + 8.72 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 134888 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr10-3963 chr10 110540440 110540650 + 8.72 0.000 Intergenic AluJr|SINE|Alu -27146 NM_005445 9126 Hs.24485 NM_005445 ENSG00000108055 SMC3 BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1 structural maintenance of chromosomes 3 protein-coding chr10-4900 chr10 20858429 20858639 + 8.72 0.000 intron (NM_006393, intron 8 of 27) intron (NM_006393, intron 8 of 27) 39068 NM_006393 10529 Hs.5025 NM_006393 ENSG00000078114 NEBL LASP2|LNEBL nebulette protein-coding chr11-2066 chr11 74721325 74721535 + 8.72 0.000 intron (NM_015424, intron 1 of 11) intron (NM_015424, intron 1 of 11) -1093 NR_039845 100616402 NR_039845 ENSG00000265902 MIR4696 - microRNA 4696 ncRNA chr9-2688 chr9 77092598 77092808 + 8.72 0.000 Intergenic MER63A|DNA|hAT-Blackjack 73048 NM_001013735 442425 Hs.553843 NM_001013735 ENSG00000204612 FOXB2 bA159H20.4 forkhead box B2 protein-coding chr6-7367 chr6 48513797 48514007 + 8.72 0.000 Intergenic L2a|LINE|L2 -445213 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr3-2135 chr3 112653937 112654147 + 8.72 0.000 Intergenic Intergenic -12899 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr18-1072 chr18 36381095 36381305 + 8.72 0.000 intron (NM_001281740, intron 3 of 28) intron (NM_001281740, intron 3 of 28) 83487 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chrX-1596 chrX 93591905 93592115 + 8.72 0.000 Intergenic MIRb|SINE|MIR 81568 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr6-4777 chr6 74554438 74554648 + 8.72 0.000 intron (NR_110856, intron 2 of 3) L1M1|LINE|L1 485092 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr2-3481 chr2 183900143 183900353 + 8.72 0.000 Intergenic LTR80A|LTR|ERVL -478727 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chrX-5213 chrX 135070759 135070969 + 8.72 0.000 Intergenic L1ME3B|LINE|L1 -18673 NM_001078172 26071 Hs.460924 NM_015582 ENSG00000203950 RTL8A CXX1b|FAM127B|MAR8A|SIRH6 retrotransposon Gag like 8A protein-coding chr15-4803 chr15 72384698 72384908 + 8.72 0.000 Intergenic Intergenic 8690 NR_027262 80072 Hs.591113 NM_025005 ENSG00000260339 HEXA-AS1 C15orf34 HEXA antisense RNA 1 ncRNA chr2-7720 chr2 34147310 34147520 + 8.72 0.000 intron (NR_126403, intron 4 of 5) MER52D|LTR|ERV1 80189 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr11-9977 chr11 77550514 77550724 + 8.72 0.000 Intergenic HERVH-int|LTR|ERV1 -20470 NR_130930 646029 Hs.609654 NM_001039908 LOC646029 - uncharacterized LOC646029 ncRNA chr15-2752 chr15 24990147 24990357 + 8.72 0.000 intron (NR_146177, intron 15 of 147) intron (NR_146177, intron 15 of 147) 3327 NR_001292 338427 NR_001292 ENSG00000239014 SNORD108 HBII-437 small nucleolar RNA, C/D box 108 snoRNA chr3-6620 chr3 126873004 126873214 + 8.72 0.000 intron (NM_032343, intron 5 of 7) intron (NM_032343, intron 5 of 7) -115485 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr11-4006 chr11 6069001 6069211 + 8.72 0.000 Intergenic Intergenic -38578 NM_001005181 196335 Hs.632154 NM_001005181 ENSG00000180919 OR56B4 OR11-67 olfactory receptor family 56 subfamily B member 4 protein-coding chr8-4575 chr8 127920188 127920398 + 8.72 0.000 intron (NR_003367, intron 2 of 8) Tigger13a|DNA|TcMar-Tigger 28430 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr10-4760 chr10 3463404 3463614 + 8.72 0.000 intron (NR_155743, intron 3 of 4) MER31B|LTR|ERV1 39329 NR_155745 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr12-2108 chr12 54018117 54018327 + 8.72 0.000 intron (NM_014620, intron 1 of 3) intron (NM_014620, intron 1 of 3) 1334 NM_014620 3221 Hs.549040 NM_014620 ENSG00000198353 HOXC4 HOX3|HOX3E|cp19 homeobox C4 protein-coding chr2-5374 chr2 98378881 98379091 + 8.72 0.000 intron (NM_001079878, intron 3 of 6) intron (NM_001079878, intron 3 of 6) 32530 NM_001079878 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr9-4183 chr9 28078731 28078941 + 8.72 0.000 intron (NM_152570, intron 5 of 6) AluSp|SINE|Alu -504970 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr6-7373 chr6 49037753 49037963 + 8.72 0.000 Intergenic Intergenic 425395 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr7-5616 chr7 52338178 52338388 + 8.72 0.000 Intergenic HERVH-int|LTR|ERV1 -697350 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr10-5930 chr10 120462339 120462549 + 8.72 0.000 intron (NR_134516, intron 2 of 4) intron (NR_134516, intron 2 of 4) 5490 NM_001030059 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr15-3001 chr15 55250506 55250716 + 8.72 0.000 intron (NM_183234, intron 1 of 6) Charlie15b|DNA|hAT-Charlie 19675 NM_183234 5873 Hs.654978 NM_004580 ENSG00000069974 RAB27A GS2|HsT18676|RAB27|RAM RAB27A, member RAS oncogene family protein-coding chr4-2901 chr4 82029387 82029597 + 8.72 0.000 Intergenic Intergenic 344499 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chrX-3851 chrX 153741471 153741681 + 8.72 0.000 intron (NM_000033, intron 7 of 9) intron (NM_000033, intron 7 of 9) 16720 NM_000033 215 Hs.159546 NM_000033 ENSG00000101986 ABCD1 ABC42|ALD|ALDP|AMN ATP binding cassette subfamily D member 1 protein-coding chrX-4317 chrX 44932827 44933037 + 8.72 0.000 intron (NR_111960, intron 2 of 27) AluSq2|SINE|Alu 59757 NM_001291417 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding chr16-6953 chr16 85916065 85916275 + 8.72 0.000 intron (NM_001363907, intron 6 of 8) MIR|SINE|MIR -2177 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr20-1411 chr20 32614427 32614637 + 8.72 0.000 Intergenic L2b|LINE|L2 27053 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr1-14528 chr1 51336569 51336779 + 8.72 0.000 intron (NM_001144832, intron 1 of 17) MIRc|SINE|MIR -6110 NM_001297663 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr8-6190 chr8 34599579 34599789 + 8.72 0.000 Intergenic Intergenic -184237 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr15-2886 chr15 42168023 42168233 + 8.72 0.000 intron (NM_015289, intron 12 of 24) L1ME2|LINE|L1 -11492 NM_213600 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr2-8834 chr2 172023455 172023665 + 8.72 0.000 intron (NM_001322279, intron 1 of 9) L1ME2z|LINE|L1 23607 NR_136276 254042 Hs.298250 NM_199227 ENSG00000172878 METAP1D MAP 1D|MAP1D|MetAP 1D|Metap1l methionyl aminopeptidase type 1D, mitochondrial protein-coding chr6-7547 chr6 70750665 70750875 + 8.72 0.000 intron (NM_001044305, intron 2 of 10) intron (NM_001044305, intron 2 of 10) 82240 NM_001281440 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr4-6912 chr4 15348411 15348621 + 8.72 0.000 intron (NM_001135170, intron 1 of 2) MER102b|DNA|hAT-Charlie 8528 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr1-11091 chr1 228871319 228871529 + 8.72 0.000 Intergenic Intergenic 135945 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr8-5314 chr8 144126418 144126628 + 8.72 0.000 Intergenic Intergenic -11251 NM_016458 51236 Hs.300224 NM_016458 ENSG00000235173 HGH1 BRP16|BRP16L|C8orf30A|C8orf30B|FAM203A|FAM203B HGH1 homolog protein-coding chr11-6906 chr11 107076096 107076306 + 8.72 0.000 Intergenic MER4E|LTR|ERV1 -57725 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr2-6318 chr2 69980628 69980838 + 8.72 0.000 intron (NR_033872, intron 9 of 10) L1MD3|LINE|L1 -18468 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase retroviral like 1 protein-coding chr4-7392 chr4 62109409 62109619 + 8.72 0.000 intron (NR_110595, intron 6 of 7) L1MB7|LINE|L1 52251 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr2-5539 chr2 160220696 160220906 + 8.72 0.000 Intergenic LTR50|LTR|ERVL -20488 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr14-2397 chr14 53850997 53851207 + 8.72 0.000 Intergenic L2b|LINE|L2 97382 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr4-8715 chr4 183163650 183163860 + 8.72 0.000 intron (NM_024949, intron 1 of 22) intron (NM_024949, intron 1 of 22) 64498 NM_024949 80014 Hs.333179 NM_024949 ENSG00000151718 WWC2 BOMB WW and C2 domain containing 2 protein-coding chr2-8016 chr2 69307966 69308176 + 8.72 0.000 Intergenic Intergenic 79156 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding KI270714.1-1 KI270714.1 11295 11505 + 8.72 0.000 NA NA NA NA chr3-5893 chr3 38412386 38412596 + 8.72 0.000 intron (NR_146068, intron 15 of 16) LTR87|LTR|ERVL? -41399 NM_001106 93 Hs.174273 NM_001106 ENSG00000114739 ACVR2B ACTRIIB|ActR-IIB|HTX4 activin A receptor type 2B protein-coding chr4-4287 chr4 26105831 26106041 + 8.72 0.000 Intergenic Intergenic 191744 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr6-4542 chr6 40638459 40638669 + 8.72 0.000 Intergenic Intergenic -51200 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr6-8105 chr6 126507145 126507355 + 8.72 0.000 Intergenic L1PA8|LINE|L1 22619 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr13-2857 chr13 110267377 110267587 + 8.72 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 39675 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr15-1448 chr15 78438571 78438781 + 8.72 0.000 5' UTR (NM_001320942, exon 1 of 22) 5' UTR (NM_001320942, exon 1 of 22) 255 NM_001320942 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr5-8186 chr5 105164359 105164569 + 8.72 0.000 Intergenic L1ME3A|LINE|L1 64990 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr3-11058 chr3 183898581 183898791 + 8.72 0.000 Intergenic Intergenic 11886 NR_039650 100616127 NR_039650 ENSG00000263932 MIR4448 - microRNA 4448 ncRNA chr2-11209 chr2 159867647 159867857 + 8.72 0.000 intron (NM_002349, intron 13 of 34) intron (NM_002349, intron 13 of 34) 37004 NM_002349 4065 Hs.153563 NM_002349 ENSG00000054219 LY75 CD205|CLEC13B|DEC-205|GP200-MR6|LY-75 lymphocyte antigen 75 protein-coding chr8-4754 chr8 142852477 142852687 + 8.72 0.000 Intergenic L1PA6|LINE|L1 17781 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr2-13142 chr2 118423824 118424034 + 8.72 0.000 Intergenic Intergenic 179037 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr1-5351 chr1 233292068 233292278 + 8.72 0.000 intron (NM_014801, intron 1 of 33) intron (NM_014801, intron 1 of 33) 3552 NM_001328607 80003 Hs.370605 NM_014801 ENSG00000135749 PCNX2 PCNXL2 pecanex 2 protein-coding chr14-4909 chr14 73093159 73093369 + 8.72 0.000 intron (NM_021239, intron 6 of 18) intron (NM_021239, intron 6 of 18) 34730 NM_021239 58517 Hs.531106 NM_021239 ENSG00000119707 RBM25 NET52|RED120|RNPC7|S164|Snu71|fSAP94 RNA binding motif protein 25 protein-coding chr1-10382 chr1 156172727 156172937 + 8.72 0.000 exon (NM_001193301, exon 11 of 15) exon (NM_001193301, exon 11 of 15) 18284 NM_001370567 64218 Hs.408846 NM_022367 ENSG00000196189 SEMA4A CORD10|RP35|SEMAB|SEMB semaphorin 4A protein-coding chr13-1088 chr13 78578423 78578633 + 8.72 0.000 intron (NR_047001, intron 3 of 5) intron (NR_047001, intron 3 of 5) -17594 NR_158457 780529 Hs.587755 NR_158457 LOC780529 - uncharacterized LOC780529 ncRNA chr7-6825 chr7 38548643 38548853 + 8.72 0.000 intron (NM_001635, intron 1 of 20) LTR9A1|LTR|ERV1 82625 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr2-4499 chr2 16490598 16490808 + 8.72 0.000 Intergenic HAL1ME|LINE|L1 175131 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr15-4831 chr15 73676153 73676363 + 8.72 0.000 Intergenic L2a|LINE|L2 -8023 NM_025240 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding chr11-6772 chr11 86747271 86747481 + 8.72 0.000 Intergenic Intergenic -43695 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr4-4778 chr4 100805577 100805787 + 8.72 0.000 Intergenic LTR1|LTR|ERV1 -130569 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr5-7772 chr5 62183777 62183987 + 8.72 0.000 Intergenic Intergenic -122280 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr1-15792 chr1 176241503 176241713 + 8.72 0.000 Intergenic MER44D|DNA|TcMar-Tigger -34322 NM_022457 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr14-4685 chr14 57009514 57009724 + 8.72 0.000 Intergenic Intergenic 196461 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA chr2-2771 chr2 232682984 232683194 + 8.72 0.000 TTS (NM_001243252) TTS (NM_001243252) -14242 NR_103493 26058 Hs.565319 NM_015575 ENSG00000204120 GIGYF2 GYF2|PARK11|PERQ2|PERQ3|TNRC15 GRB10 interacting GYF protein 2 protein-coding chr10-6247 chr10 71372403 71372613 + 8.72 0.000 Intergenic MER5A|DNA|hAT-Charlie -24412 NM_052836 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr16-6213 chr16 28029651 28029861 + 8.72 0.000 intron (NM_001109763, intron 1 of 6) (ATGG)n|Simple_repeat|Simple_repeat 33958 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr2-3983 chr2 81019613 81019823 + 8.72 0.000 Intergenic Intergenic 447228 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr3-10119 chr3 113033537 113033747 + 8.72 0.000 Intergenic MLT2C1|LTR|ERVL -13971 NM_001319109 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr2-6566 chr2 221391256 221391466 + 8.72 0.000 Intergenic Intergenic 180943 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-4721 chr3 62449885 62450095 + 8.72 0.000 intron (NM_003716, intron 26 of 29) MIR|SINE|MIR -76440 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr1-13961 chr1 24672053 24672263 + 8.72 0.000 intron (NM_001366594, intron 17 of 17) intron (NM_001366594, intron 17 of 17) 28579 NM_001366597 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr1-1364 chr1 31431841 31432051 + 8.72 0.000 intron (NM_178865, intron 8 of 9) (GATAGGGTG)n|Simple_repeat|Simple_repeat 18133 NM_018565 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr10-3273 chr10 128339158 128339368 + 8.72 0.000 Intergenic Intergenic 53313 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr2-11443 chr2 224963046 224963256 + 8.72 0.000 intron (NM_014689, intron 1 of 55) MER102b|DNA|hAT-Charlie -16102 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr15-2737 chr15 99243299 99243509 + 8.72 0.000 intron (NR_109947, intron 2 of 12) L1MA3|LINE|L1 6177 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding chr2-14622 chr2 234468681 234468891 + 8.72 0.000 Intergenic Intergenic -14191 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr17-8466 chr17 77771811 77772021 + 8.72 0.000 Intergenic MIR3|SINE|MIR -43357 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr4-3970 chr4 186248389 186248599 + 8.72 0.000 intron (NM_001318396, intron 6 of 14) L1MB7|LINE|L1 -17470 NM_000128 2160 Hs.1430 NM_000128 ENSG00000088926 F11 FXI|PTA coagulation factor XI protein-coding chr2-11242 chr2 169071417 169071627 + 8.72 0.000 intron (NM_199204, intron 2 of 5) intron (NM_199204, intron 2 of 5) -1053 NM_001142270 10170 Hs.179608 NM_005771 ENSG00000073737 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase 9 protein-coding chr10-4587 chr10 110651441 110651651 + 8.72 0.000 intron (NM_001134363, intron 1 of 13) intron (NM_001134363, intron 1 of 13) 7210 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr6-8492 chr6 157312689 157312899 + 8.72 0.000 intron (NM_018452, intron 3 of 3) intron (NM_018452, intron 3 of 3) 11465 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr6-4389 chr6 24695670 24695880 + 8.72 0.000 intron (NM_001160094, intron 2 of 3) intron (NM_001160094, intron 2 of 3) 23379 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding chr6-4413 chr6 27237993 27238203 + 8.72 0.000 Intergenic Intergenic -9603 NM_005865 10279 Hs.274407 NM_005865 ENSG00000112812 PRSS16 TSSP serine protease 16 protein-coding chr7-5213 chr7 13107991 13108201 + 8.72 0.000 Intergenic L2|LINE|L2 420463 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr4-6392 chr4 115106847 115107057 + 8.72 0.000 intron (NM_022569, intron 1 of 13) AluJr|SINE|Alu 6668 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr15-3131 chr15 66322730 66322940 + 8.72 0.000 exon (NM_001323945, exon 10 of 17) exon (NM_001323945, exon 10 of 17) 24507 NR_004388 692149 NR_004388 ENSG00000252712 SCARNA14 U100 small Cajal body-specific RNA 14 ncRNA chr12-2324 chr12 189216 189426 + 8.72 0.000 TTS (NM_001122847) TTS (NM_001122847) -14324 NR_120475 101929384 Hs.569138 NR_120475 ENSG00000256577 LOC101929384 - uncharacterized LOC101929384 ncRNA chr3-11121 chr3 186599773 186599983 + 8.72 0.000 Intergenic Intergenic -13182 NM_001354572 197 Hs.324746 NM_001622 ENSG00000145192 AHSG A2HS|AHS|APMR1|FETUA|HSGA alpha 2-HS glycoprotein protein-coding chr8-3581 chr8 133809785 133809995 + 8.72 0.000 Intergenic Intergenic -32538 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr2-7682 chr2 30178956 30179166 + 8.72 0.000 Intergenic Intergenic -8373 NR_145719 109616960 NR_145719 ENSG00000207187 SNORA10B - small nucleolar RNA, H/ACA box 10B snoRNA chr6-5760 chr6 159821045 159821255 + 8.72 0.000 TTS (NM_001271862) TTS (NM_001271862) 20874 NM_001271862 154197 Hs.349077 NM_173516 ENSG00000146453 PNLDC1 HsPNLDC1 PARN like, ribonuclease domain containing 1 protein-coding chr3-4024 chr3 66014745 66014955 + 8.72 0.000 intron (NM_001365904, intron 1 of 24) L2c|LINE|L2 24068 NM_001365904 9223 Hs.476636 NM_004742 ENSG00000151276 MAGI1 AIP-3|AIP3|BAIAP1|BAP-1|BAP1|MAGI-1|MAGI-1b|Magi1d|TNRC19|WWP3 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding chr8-2505 chr8 19608681 19608891 + 8.72 0.000 intron (NR_148898, intron 1 of 9) intron (NR_148898, intron 1 of 9) -6241 NM_001354491 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr8-6818 chr8 97123514 97123724 + 8.72 0.000 intron (NM_016134, intron 7 of 7) L1ME1|LINE|L1 154309 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr14-4512 chr14 38677235 38677445 + 8.72 0.000 Intergenic LTR66|LTR|ERVL -205256 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr10-8867 chr10 112370459 112370669 + 8.72 0.000 Intergenic LTR12C|LTR|ERV1 -3552 NM_203379 51703 Hs.11638 NM_016234 ENSG00000197142 ACSL5 ACS2|ACS5|FACL5 acyl-CoA synthetase long chain family member 5 protein-coding chr12-4587 chr12 31903529 31903739 + 8.72 0.000 Intergenic L1M5|LINE|L1 -16431 NR_135029 105369723 Hs.736954 NR_135029 ENSG00000255760 LINC02422 - long intergenic non-protein coding RNA 2422 ncRNA chr2-7109 chr2 179073896 179074106 + 8.72 0.000 Intergenic HERVL-int|LTR|ERVL -23864 NM_173648 285025 Hs.324341 NM_173648 ENSG00000163492 CCDC141 CAMDI coiled-coil domain containing 141 protein-coding chr1-5955 chr1 27719829 27720039 + 8.72 0.000 Intergenic FLAM_C|SINE|Alu -6027 NM_001143914 199870 Hs.469359 NM_152660 ENSG00000009780 FAM76A - family with sequence similarity 76 member A protein-coding chr1-13989 chr1 25670534 25670744 + 8.72 0.000 intron (NM_020379, intron 1 of 11) intron (NM_020379, intron 1 of 11) 53171 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr3-9686 chr3 64454196 64454406 + 8.72 0.000 Intergenic Intergenic -107045 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr8-3732 chr8 22095716 22095926 + 8.72 0.000 intron (NR_148728, intron 4 of 19) intron (NR_148728, intron 4 of 19) 6667 NR_148727 64760 Hs.491223 NM_022749 ENSG00000158863 FAM160B2 RAI16 family with sequence similarity 160 member B2 protein-coding chr8-1322 chr8 22109353 22109563 + 8.72 0.000 promoter-TSS (NM_024815) promoter-TSS (NM_024815) -39 NM_024815 79873 Hs.527101 NM_024815 ENSG00000275074 NUDT18 MTH3 nudix hydrolase 18 protein-coding chr5-3381 chr5 141330295 141330505 + 8.72 0.000 promoter-TSS (NM_018912) promoter-TSS (NM_018912) -285 NM_031993 56114 Hs.368160 NM_018912 ENSG00000204956 PCDHGA1 PCDH-GAMMA-A1 protocadherin gamma subfamily A, 1 protein-coding chr12-4543 chr12 26534172 26534382 + 8.72 0.000 intron (NM_002223, intron 37 of 56) intron (NM_002223, intron 37 of 56) 298917 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr2-3517 chr2 231554836 231555046 + 8.72 0.000 Intergenic Intergenic -24496 NM_006056 10316 Hs.471619 NM_006056 ENSG00000171596 NMUR1 (FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R neuromedin U receptor 1 protein-coding chr1-15245 chr1 112383360 112383570 + 8.72 0.000 Intergenic Intergenic -12749 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr7-6323 chr7 141918991 141919201 + 8.72 0.000 exon (NM_001001656, exon 1 of 1) exon (NM_001001656, exon 1 of 1) 220 NM_001001656 130075 Hs.690171 NM_001001656 ENSG00000258083 OR9A4 - olfactory receptor family 9 subfamily A member 4 protein-coding chr14-5272 chr14 100244721 100244931 + 8.72 0.000 intron (NM_003403, intron 1 of 4) AluJb|SINE|Alu 5682 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chrX-1344 chrX 136567032 136567242 + 8.72 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 16259 NR_030631 100126324 NR_030631 ENSG00000216060 MIR934 MIRN934|hsa-mir-934|mir-934 microRNA 934 ncRNA chr2-6365 chr2 105251416 105251626 + 8.72 0.000 intron (NM_001328646, intron 11 of 11) SVA_C|Retroposon|SVA 9778 NM_007227 11250 Hs.590903 NM_007227 ENSG00000135973 GPR45 PSP24|PSP24(ALPHA)|PSP24A G protein-coupled receptor 45 protein-coding chr9-8133 chr9 101438250 101438460 + 8.72 0.000 Intergenic Intergenic -2581 NM_000035 229 Hs.530274 NM_000035 ENSG00000136872 ALDOB ALDB|ALDO2 aldolase, fructose-bisphosphate B protein-coding chr11-8077 chr11 34787859 34788069 + 8.72 0.000 Intergenic Intergenic -128166 NM_001166158 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding chr1-8380 chr1 72623392 72623602 + 8.72 0.000 Intergenic LTR50|LTR|ERVL -340958 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr22-2470 chr22 20631380 20631590 + 8.72 0.000 Intergenic Intergenic -58070 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin like 4, pseudogene pseudo chr10-8284 chr10 77154861 77155071 + 8.72 0.000 intron (NM_001271519, intron 5 of 28) L2b|LINE|L2 14135 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr1-16717 chr1 247451633 247451843 + 8.72 0.000 exon (NM_001004492, exon 1 of 1) exon (NM_001004492, exon 1 of 1) 244 NM_001004492 127623 Hs.446999 NM_001004492 ENSG00000177535 OR2B11 - olfactory receptor family 2 subfamily B member 11 protein-coding chr10-6658 chr10 103441841 103442051 + 8.72 0.000 exon (NM_014976, exon 31 of 36) exon (NM_014976, exon 31 of 36) 10424 NR_046344 51063 Hs.241545 NM_015916 ENSG00000138172 CALHM2 FAM26B calcium homeostasis modulator family member 2 protein-coding chr2-5369 chr2 97195376 97195586 + 8.72 0.000 intron (NM_001354587, intron 40 of 75) intron (NM_001354587, intron 40 of 75) 82328 NM_001354587 375248 Hs.541894 NM_198555 ENSG00000135976 ANKRD36 UNQ2430 ankyrin repeat domain 36 protein-coding chr4-3297 chr4 146853943 146854153 + 8.72 0.000 intron (NR_133922, intron 8 of 13) LTR16C|LTR|ERVL 91816 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr19-6620 chr19 30274937 30275147 + 8.72 0.000 Intergenic Intergenic -97342 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr6-3575 chr6 68768775 68768985 + 8.72 0.000 intron (NM_001704, intron 3 of 31) L1PA7|LINE|L1 133598 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr22-2633 chr22 33449100 33449310 + 8.72 0.000 intron (NM_133642, intron 6 of 14) L2|LINE|L2 -12536 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr11-8998 chr11 23802160 23802370 + 8.72 0.000 Intergenic Intergenic -383075 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr17-5885 chr17 70817505 70817715 + 8.72 0.000 Intergenic Intergenic 384569 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr3-7091 chr3 179527053 179527263 + 8.72 0.000 Intergenic Intergenic -35722 NM_177989 86 Hs.435326 NM_004301 ENSG00000136518 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin like 6A protein-coding chr15-4749 chr15 69311579 69311789 + 8.72 0.000 intron (NM_017705, intron 1 of 8) MER74B|LTR|ERVL -2719 NM_001104554 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chr18-2058 chr18 47752956 47753166 + 8.72 0.000 Intergenic L2a|LINE|L2 177598 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr8-4615 chr8 132021304 132021514 + 8.72 0.000 Intergenic L2|LINE|L2 37973 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr1-6112 chr1 155007656 155007866 + 8.72 0.000 intron (NR_049765, intron 2 of 3) intron (NR_049765, intron 2 of 3) 5131 NR_046206 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr9-4913 chr9 9471000 9471210 + 8.72 0.000 intron (NM_002839, intron 8 of 45) intron (NM_002839, intron 8 of 45) -328287 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr18-2571 chr18 8340846 8341056 + 8.72 0.000 intron (NM_002845, intron 20 of 30) intron (NM_002845, intron 20 of 30) 26083 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr6-5803 chr6 12821717 12821927 + 8.72 0.000 intron (NM_001322308, intron 3 of 13) MIRb|SINE|MIR 103123 NM_001322310 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr4-3022 chr4 128832425 128832635 + 8.72 0.000 intron (NM_001287442, intron 2 of 10) intron (NM_001287442, intron 2 of 10) 20686 NM_001287443 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr8-4968 chr8 125825347 125825557 + 8.72 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 125745 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr22-913 chr22 31662275 31662485 + 8.72 0.000 promoter-TSS (NM_001326419) promoter-TSS (NM_001326419) -165 NM_001326417 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr7-1931 chr7 41700068 41700278 + 8.72 0.000 exon (NM_002192, exon 2 of 3) exon (NM_002192, exon 2 of 3) 2917 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr1-7116 chr1 201874511 201874721 + 8.72 0.000 intron (NM_018085, intron 21 of 23) intron (NM_018085, intron 21 of 23) 11243 NR_106797 102466724 NR_106797 ENSG00000277681 MIR6739 hsa-mir-6739 microRNA 6739 ncRNA chr19-3171 chr19 41016834 41017044 + 8.72 0.000 3' UTR (NM_000767, exon 9 of 9) 3' UTR (NM_000767, exon 9 of 9) 25657 NM_000767 1555 Hs.1360 NM_000767 ENSG00000197408 CYP2B6 CPB6|CYP2B|CYP2B7|CYP2B7P|CYPIIB6|EFVM|IIB1|P450 cytochrome P450 family 2 subfamily B member 6 protein-coding chr3-2297 chr3 111670083 111670293 + 8.72 0.000 Intergenic Intergenic -4488 NM_001185106 257068 Hs.477114 NM_153268 ENSG00000240891 PLCXD2 - phosphatidylinositol specific phospholipase C X domain containing 2 protein-coding chr5-5424 chr5 136690752 136690962 + 8.72 0.000 Intergenic L1PA15-16|LINE|L1 -325381 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr2-13808 chr2 174939288 174939498 + 8.72 0.000 intron (NM_001025201, intron 4 of 12) intron (NM_001025201, intron 4 of 12) 65860 NM_001822 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr3-2792 chr3 157321 157531 + 8.72 0.000 Intergenic AluJb|SINE|Alu -39170 NM_001253387 10752 Hs.148909 NM_006614 ENSG00000134121 CHL1 CALL|L1CAM2 cell adhesion molecule L1 like protein-coding chr8-3814 chr8 28530430 28530640 + 8.72 0.000 intron (NM_017412, intron 5 of 7) MIR|SINE|MIR -25353 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr13-3917 chr13 57135866 57136076 + 8.72 0.000 Intergenic Intergenic -4947 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr11-5983 chr11 19505428 19505638 + 8.72 0.000 non-coding (NR_049725, exon 1 of 3) non-coding (NR_049725, exon 1 of 3) 1696 NR_049725 100874012 Hs.434602 NR_049725 ENSG00000255043 NAV2-AS5 - NAV2 antisense RNA 5 ncRNA chrX-1971 chrX 10239699 10239909 + 8.72 0.000 Intergenic AluSz|SINE|Alu 82829 NM_001830 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chrX-3750 chrX 125684630 125684840 + 8.72 0.000 Intergenic MER4A|LTR|ERV1 364864 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr3-7905 chr3 135556173 135556383 + 8.72 0.000 Intergenic Intergenic -409450 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr8-2827 chr8 128042327 128042537 + 8.72 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) -6720 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr3-4634 chr3 19932258 19932468 + 8.72 0.000 intron (NM_001330688, intron 3 of 14) intron (NM_001330688, intron 3 of 14) 1854 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding chr8-5432 chr8 35401852 35402062 + 8.72 0.000 intron (NM_080872, intron 1 of 16) intron (NM_080872, intron 1 of 16) -142435 NM_001322818 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr12-6669 chr12 2924043 2924253 + 8.72 0.000 intron (NM_003324, intron 4 of 10) L2b|LINE|L2 33257 NM_001160408 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 TUB like protein 3 protein-coding chr2-13709 chr2 166624830 166625040 + 8.72 0.000 Intergenic L1PREC2|LINE|L1 -137964 NR_045628 6332 Hs.596087 NM_002976 ENSG00000136546 SCN7A NaG|Nav2.1|Nav2.2|SCN6A sodium voltage-gated channel alpha subunit 7 protein-coding chr14-3525 chr14 103925591 103925801 + 8.72 0.000 Intergenic AluSg|SINE|Alu -2760 NM_153046 122402 Hs.21454 NM_153046 ENSG00000156414 TDRD9 C14orf75|HIG-1|HLS|NET54|SPGF30|SPNE tudor domain containing 9 protein-coding chr11-6065 chr11 32073377 32073587 + 8.72 0.000 Intergenic Intergenic -17592 NM_002901 5954 Hs.97887 NM_002901 ENSG00000049449 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1 protein-coding chr10-7613 chr10 21510529 21510739 + 8.72 0.000 Intergenic Intergenic -13374 NR_160800 399726 Hs.315568 NM_001010911 ENSG00000204682 MIR1915HG C10orf114|CASC10|bA418C1.3 MIR1915 host gene ncRNA chr21-1904 chr21 44636518 44636728 + 8.72 0.000 promoter-TSS (NM_181688) promoter-TSS (NM_181688) -733 NM_181688 353333 Hs.474001 NM_181688 ENSG00000221859 KRTAP10-10 KAP10.10|KAP18.10|KRTAP18-10|KRTAP18.10 keratin associated protein 10-10 protein-coding chr8-3824 chr8 29350427 29350637 + 8.72 0.000 5' UTR (NM_001394, exon 1 of 4) 5' UTR (NM_001394, exon 1 of 4) 152 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr19-6882 chr19 45112471 45112681 + 8.72 0.000 intron (NM_019121, intron 1 of 12) L2b|LINE|L2 19397 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr2-7246 chr2 228079550 228079760 + 8.72 0.000 intron (NM_030623, intron 3 of 10) L1M3e|LINE|L1 101990 NM_030623 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr11-8726 chr11 7415103 7415313 + 8.72 0.000 intron (NM_175733, intron 3 of 6) intron (NM_175733, intron 3 of 6) 50627 NR_103855 100506258 Hs.661614 NR_103855 ENSG00000251364 LOC100506258 - uncharacterized LOC100506258 ncRNA chr19-1138 chr19 14561972 14562182 + 8.72 0.000 intron (NM_001321170, intron 2 of 13) intron (NM_001321170, intron 2 of 13) 9989 NM_004146 4713 Hs.532853 NM_004146 ENSG00000099795 NDUFB7 B18|CI-B18 NADH:ubiquinone oxidoreductase subunit B7 protein-coding chr4-6004 chr4 190107529 190107739 + 8.72 0.000 Intergenic HERVK-int|LTR|ERVK 42405 NM_001293798 100288687 Hs.728749 NM_001205218 ENSG00000260596 DUX4 DUX4L double homeobox 4 protein-coding chr22-2513 chr22 23595745 23595955 + 8.72 0.000 Intergenic Intergenic -15560 NM_152855 3543 Hs.348935 NM_020070 ENSG00000128322 IGLL1 14.1|AGM2|CD179b|IGL1|IGL5|IGLJ14.1|IGLL|IGO|IGVPB|VPREB2 immunoglobulin lambda like polypeptide 1 protein-coding chr2-4337 chr2 239411214 239411424 + 8.72 0.000 Intergenic Intergenic 9571 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr1-16068 chr1 202207391 202207601 + 8.72 0.000 intron (NM_021636, intron 1 of 17) intron (NM_021636, intron 1 of 17) 3784 NM_021636 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr13-2206 chr13 21625460 21625670 + 8.72 0.000 Intergenic Intergenic -21395 NM_152726 221154 Hs.412103 NM_152726 ENSG00000165487 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding chr3-9558 chr3 53596043 53596253 + 8.72 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 101537 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr6-6224 chr6 18508644 18508854 + 8.72 0.000 Intergenic Intergenic -13998 NR_149116 105374956 Hs.561599 NR_149116 MIR548A1HG - MIR548A1 host gene ncRNA chr6-3774 chr6 17332364 17332574 + 8.72 0.000 Intergenic L1ME3D|LINE|L1 49768 NM_153020 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr19-2728 chr19 34804002 34804212 + 8.72 0.000 Intergenic Intergenic 28762 NR_033982 400685 Hs.730118 NR_033982 ENSG00000267767 LINC01801 - long intergenic non-protein coding RNA 1801 ncRNA chr22-2124 chr22 34580783 34580993 + 8.72 0.000 Intergenic L1MC3|LINE|L1 417028 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr6-3083 chr6 79819479 79819689 + 8.72 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -7338 NR_131786 89758 Hs.288213 NM_001243308 LINC01621 C6orf7 long intergenic non-protein coding RNA 1621 ncRNA chr1-10607 chr1 177837433 177837643 + 8.72 0.000 Intergenic MIRb|SINE|MIR 132384 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr1-7982 chr1 204006354 204006564 + 8.72 0.000 Intergenic Intergenic 34805 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr21-810 chr21 17139922 17140132 + 8.72 0.000 Intergenic Intergenic -298863 NR_037585 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chr3-5019 chr3 28177870 28178080 + 8.72 0.000 Intergenic MSTA|LTR|ERVL-MaLR -63644 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr11-4812 chr11 8108651 8108861 + 8.72 0.000 non-coding (NR_144484, exon 5 of 5) non-coding (NR_144484, exon 5 of 5) 27394 NM_177972 7275 Hs.568986 NM_003320 ENSG00000166402 TUB RDOB|rd5 TUB bipartite transcription factor protein-coding chr14-2392 chr14 52187266 52187476 + 8.72 0.000 Intergenic Intergenic -80327 NM_000953 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr3-7123 chr3 183794246 183794456 + 8.72 0.000 TTS (NM_001351371) TTS (NM_001351371) 16100 NR_046727 100874113 NR_046727 YEATS2-AS1 - YEATS2 antisense RNA 1 ncRNA chr3-2884 chr3 47938921 47939131 + 8.72 0.000 intron (NM_002375, intron 3 of 18) intron (NM_002375, intron 3 of 18) 89471 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr1-6100 chr1 145281381 145281591 + 8.72 0.000 TTS (NR_104075) TTS (NR_104075) 370 NR_104075 101954266 NR_104075 ENSG00000207501 RNVU1-14 RNU1-37|vU1.14 RNA, variant U1 small nuclear 14 snRNA chr7-5604 chr7 50771735 50771945 + 8.72 0.000 intron (NM_001001555, intron 1 of 16) intron (NM_001001555, intron 1 of 16) 11056 NM_001350814 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr8-2382 chr8 48003657 48003867 + 8.72 0.000 Intergenic Intergenic -4669 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr2-6362 chr2 104236490 104236700 + 8.72 0.000 Intergenic Intergenic 171737 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr3-7992 chr3 183202404 183202614 + 8.72 0.000 intron (NM_015078, intron 25 of 29) L1MB7|LINE|L1 -39775 NM_014398 27074 Hs.518448 NM_014398 ENSG00000078081 LAMP3 CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403 lysosomal associated membrane protein 3 protein-coding chr6-2773 chr6 132133157 132133367 + 8.72 0.000 promoter-TSS (NR_146223) promoter-TSS (NR_146223) -716 NR_146223 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr2-5088 chr2 11535170 11535380 + 8.72 0.000 intron (NM_014668, intron 1 of 32) intron (NM_014668, intron 1 of 32) 1230 NM_014668 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr10-6950 chr10 64306817 64307027 + 8.72 0.000 Intergenic Intergenic -518606 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr8-6874 chr8 100677616 100677826 + 8.72 0.000 Intergenic AluJb|SINE|Alu 25303 NR_106992 102466854 NR_106992 ENSG00000284570 MIR7705 hsa-mir-7705 microRNA 7705 ncRNA chr20-1724 chr20 41172594 41172804 + 8.72 0.000 intron (NM_182811, intron 26 of 31) intron (NM_182811, intron 26 of 31) 3676 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr16-4644 chr16 74236212 74236422 + 8.72 0.000 Intergenic AluSq2|SINE|Alu -20796 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr17-5756 chr17 60161040 60161250 + 8.72 0.000 intron (NR_137422, intron 8 of 11) intron (NR_137422, intron 8 of 11) 11172 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr2-6395 chr2 124120098 124120308 + 8.72 0.000 intron (NM_130773, intron 1 of 23) intron (NM_130773, intron 1 of 23) 94916 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr13-3961 chr13 61617408 61617618 + 8.72 0.000 Intergenic Intergenic -189567 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr1-6972 chr1 161379146 161379356 + 8.72 0.000 Intergenic Intergenic -11368 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr17-4272 chr17 65557276 65557486 + 8.72 0.000 intron (NM_001363813, intron 2 of 9) intron (NM_001363813, intron 2 of 9) 4267 NM_001363813 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr20-4008 chr20 36324486 36324696 + 8.72 0.000 intron (NM_001365621, intron 1 of 12) L1ME3|LINE|L1 18252 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chrX-920 chrX 17014471 17014681 + 8.72 0.000 intron (NM_001080975, intron 2 of 17) intron (NM_001080975, intron 2 of 17) 67918 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr13-2593 chr13 73465229 73465439 + 8.72 0.000 Intergenic Intergenic -98910 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr16-4338 chr16 30992826 30993036 + 8.72 0.000 intron (NM_052874, intron 9 of 9) intron (NM_052874, intron 9 of 9) 7724 NM_001142778 80270 Hs.460618 NM_025193 ENSG00000099377 HSD3B7 CBAS1|PFIC4|SDR11E3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding chr12-8300 chr12 127849474 127849684 + 8.72 0.000 Intergenic L1PREC2|LINE|L1 -32038 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chr17-4049 chr17 77842632 77842842 + 8.72 0.000 Intergenic Intergenic 41350 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr2-8898 chr2 179252046 179252256 + 8.72 0.000 intron (NM_178123, intron 1 of 17) intron (NM_178123, intron 1 of 17) 12681 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chrX-2023 chrX 16114968 16115178 + 8.72 0.000 Intergenic Intergenic -8492 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr1-10646 chr1 181733480 181733690 + 8.72 0.000 exon (NM_001205294, exon 20 of 46) exon (NM_001205294, exon 20 of 46) 250068 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr10-4087 chr10 55088448 55088658 + 8.72 0.000 intron (NM_001354404, intron 3 of 34) AluSz|SINE|Alu -287262 NM_001142767 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding chr4-3622 chr4 9931148 9931358 + 8.72 0.000 intron (NM_001001290, intron 7 of 12) intron (NM_001001290, intron 7 of 12) 90244 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr11-3785 chr11 62479575 62479785 + 8.72 0.000 intron (NM_024060, intron 5 of 5) intron (NM_024060, intron 5 of 5) 60647 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr18-3376 chr18 59111296 59111506 + 8.72 0.000 Intergenic Intergenic -28483 NM_001307941 90701 Hs.45107 NM_033280 ENSG00000166562 SEC11C SEC11L3|SPC21|SPCS4C SEC11 homolog C, signal peptidase complex subunit protein-coding chr4-3677 chr4 42403589 42403799 + 8.72 0.000 Intergenic MER20B|DNA|hAT-Charlie 6206 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr18-1408 chr18 944964 945174 + 8.72 0.000 Intergenic MLT1E1|LTR|ERVL-MaLR -17076 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA chr9-5380 chr9 92010945 92011155 + 8.72 0.000 Intergenic Intergenic -60822 NM_001318204 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr4-7082 chr4 32048752 32048962 + 8.72 0.000 intron (NR_125936, intron 1 of 2) L1M1|LINE|L1 -26435 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA chr2-14036 chr2 194349017 194349227 + 8.72 0.000 intron (NR_110222, intron 1 of 5) intron (NR_110222, intron 1 of 5) 4853 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr22-3564 chr22 19043349 19043559 + 8.72 0.000 intron (NM_001184781, intron 7 of 9) intron (NM_001184781, intron 7 of 9) 4921 NR_024157 25786 Hs.720269 NR_024157 ENSG00000273311 DGCR11 DGS-D DiGeorge syndrome critical region gene 11 ncRNA chr6-5502 chr6 164072626 164072836 + 8.72 0.000 Intergenic THE1C|LTR|ERVL-MaLR -401247 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr2-7715 chr2 33719795 33720005 + 8.72 0.000 intron (NR_126403, intron 1 of 5) intron (NR_126403, intron 1 of 5) 8317 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr2-13950 chr2 186029078 186029288 + 8.72 0.000 Intergenic Intergenic 57134 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr8-1782 chr8 80203655 80203865 + 8.72 0.000 Intergenic Intergenic -32196 NM_001025253 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr13-3711 chr13 38969422 38969632 + 8.72 0.000 intron (NM_145286, intron 5 of 6) intron (NM_145286, intron 5 of 6) 21304 NM_145286 161003 Hs.327794 NM_145286 ENSG00000133115 STOML3 Epb7.2l|SRO stomatin like 3 protein-coding chr2-10344 chr2 161242049 161242259 + 8.72 0.000 intron (NR_110593, intron 3 of 3) intron (NR_110593, intron 3 of 3) -2585 NR_110164 100996579 Hs.660929 NR_110163 ENSG00000227403 LINC01806 - long intergenic non-protein coding RNA 1806 ncRNA chr14-2660 chr14 71139277 71139487 + 8.72 0.000 Intergenic Intergenic -181094 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr8-2696 chr8 94713479 94713689 + 8.72 0.000 Intergenic Intergenic -6316 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr2-7199 chr2 216066352 216066562 + 8.72 0.000 exon (NM_018441, exon 2 of 8) exon (NM_018441, exon 2 of 8) 15352 NM_018441 55825 Hs.281680 NM_018441 ENSG00000115425 PECR DCRRP|HPDHASE|HSA250303|PVIARL|SDR29C1|TERP peroxisomal trans-2-enoyl-CoA reductase protein-coding chr6-7308 chr6 44192886 44193096 + 8.72 0.000 Intergenic Intergenic -23935 NM_001315494 101929726 Hs.438979 NM_001315494 ENSG00000262179 MYMX MINION|hMINION myomixer, myoblast fusion factor protein-coding chr4-4792 chr4 103243410 103243620 + 8.72 0.000 Intergenic L1PA5|LINE|L1 -45172 NM_001286734 1062 Hs.75573 NM_001813 ENSG00000138778 CENPE CENP-E|KIF10|MCPH13|PPP1R61 centromere protein E protein-coding chr3-4895 chr3 183469396 183469606 + 8.72 0.000 Intergenic Intergenic 15687 NR_145763 109617007 NR_145763 ENSG00000199363 SNORA63E - small nucleolar RNA, H/ACA box 63E snoRNA chr17-4333 chr17 2440883 2441093 + 8.72 0.000 intron (NM_024086, intron 7 of 9) AluJo|SINE|Alu -25552 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chrX-4587 chrX 72019719 72019929 + 8.72 0.000 intron (NM_001013627, intron 1 of 7) MIR3|SINE|MIR -24585 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr8-3025 chr8 126614706 126614916 + 8.72 0.000 Intergenic Intergenic -56333 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr2-13910 chr2 182019660 182019870 + 8.72 0.000 intron (NM_001261425, intron 2 of 5) intron (NM_001261425, intron 2 of 5) 33912 NM_001261425 151242 Hs.10941 NM_001080545 ENSG00000150722 PPP1R1C IPP5 protein phosphatase 1 regulatory inhibitor subunit 1C protein-coding chr16-6771 chr16 77055542 77055752 + 8.72 0.000 Intergenic L1PA16|LINE|L1 -135543 NM_014940 22879 Hs.513743 NM_014940 ENSG00000103111 MON1B HSRG1|SAND2|SRG1 MON1 homolog B, secretory trafficking associated protein-coding chrX-1408 chrX 18616357 18616567 + 8.72 0.000 intron (NM_001037343, intron 16 of 21) AluSp|SINE|Alu 55641 NM_000330 6247 Hs.715725 NM_000330 ENSG00000102104 RS1 RS|XLRS1 retinoschisin 1 protein-coding chr17-2084 chr17 80495656 80495866 + 8.72 0.000 Intergenic L1MB3|LINE|L1 -19154 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr1-10805 chr1 202781060 202781270 + 8.72 0.000 intron (NM_001314042, intron 1 of 27) AluJr4|SINE|Alu 28305 NM_001314042 10765 Hs.18891 NM_006618 ENSG00000117139 KDM5B CT31|JARID1B|MRT65|PLU-1|PLU1|PPP1R98|PUT1|RBBP2H1A|RBP2-H1 lysine demethylase 5B protein-coding chr10-6916 chr10 48289844 48290054 + 8.72 0.000 Intergenic MSTA|LTR|ERVL-MaLR -15253 NM_001018071 143162 Hs.664786 NM_152428 ENSG00000170324 FRMPD2 PDZD5C|PDZK4|PDZK5C FERM and PDZ domain containing 2 protein-coding chr17-8527 chr17 79343867 79344077 + 8.72 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 172176 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-6588 chr1 36565476 36565686 + 8.72 0.000 Intergenic Intergenic -82267 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr12-6969 chr12 28694367 28694577 + 8.72 0.000 Intergenic Intergenic -454806 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr16-2843 chr16 84650856 84651066 + 8.72 0.000 intron (NM_001303451, intron 2 of 3) intron (NM_001303451, intron 2 of 3) 2450 NM_024731 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr2-5713 chr2 214934755 214934965 + 8.72 0.000 intron (NR_103740, intron 53 of 54) L2|LINE|L2 87913 NR_145773 109617008 NR_145773 ENSG00000207274 SNORA70I - small nucleolar RNA, H/ACA box 70I snoRNA chr21-853 chr21 30665101 30665311 + 8.72 0.000 Intergenic Intergenic 22342 NM_001128077 337985 Hs.580878 NM_001128077 ENSG00000206104 KRTAP20-3 KAP19D|KAP20.3|KRTAP19P4 keratin associated protein 20-3 protein-coding chr2-12923 chr2 101039323 101039533 + 8.72 0.000 intron (NM_001102426, intron 6 of 19) FLAM_C|SINE|Alu 37139 NM_000993 6160 Hs.469473 NM_000993 ENSG00000071082 RPL31 L31 ribosomal protein L31 protein-coding chr1-6507 chr1 25050914 25051124 + 8.72 0.000 Intergenic L2b|LINE|L2 27516 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr6-3391 chr6 56684003 56684213 + 8.72 0.000 intron (NM_001144770, intron 6 of 94) intron (NM_001144770, intron 6 of 94) -41219 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr19-3101 chr19 7597670 7597880 + 8.72 0.000 intron (NM_020902, intron 1 of 16) intron (NM_020902, intron 1 of 16) 1912 NM_001080429 57662 Hs.17686 NM_020902 ENSG00000076826 CAMSAP3 KIAA1543|NEZHA|PPP1R80 calmodulin regulated spectrin associated protein family member 3 protein-coding chr4-3039 chr4 137542501 137542711 + 8.72 0.000 Intergenic Intergenic -3125 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr2-8108 chr2 78013654 78013864 + 8.72 0.000 intron (NR_110288, intron 1 of 3) HAL1|LINE|L1 -58733 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA chr4-8692 chr4 181182858 181183068 + 8.72 0.000 Intergenic Intergenic -23814 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr7-4104 chr7 42832482 42832692 + 8.72 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 79256 NM_001363436 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr14-3648 chr14 76492924 76493134 + 8.72 0.000 intron (NM_004452, intron 8 of 10) MIRb|SINE|MIR 121682 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr12-4936 chr12 69415937 69416147 + 8.72 0.000 Intergenic Intergenic -54346 NM_001042555 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding chr12-5077 chr12 93358904 93359114 + 8.72 0.000 intron (NR_040096, intron 1 of 4) intron (NR_040096, intron 1 of 4) 18727 NR_040096 643339 Hs.741299 NR_040096 LOC643339 - uncharacterized LOC643339 ncRNA chr1-9127 chr1 18412440 18412650 + 8.72 0.000 Intergenic Intergenic -68385 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr3-3445 chr3 140885983 140886193 + 8.72 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -55748 NM_001104647 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr2-10644 chr2 16761713 16761923 + 8.72 0.000 Intergenic L1MA4A|LINE|L1 -95984 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr11-7847 chr11 116437867 116438077 + 8.72 0.000 Intergenic Intergenic -201450 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr4-7523 chr4 75322258 75322468 + 8.72 0.000 Intergenic AluSz|SINE|Alu -31713 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr1-10744 chr1 198744525 198744735 + 8.72 0.000 intron (NM_002838, intron 26 of 32) intron (NM_002838, intron 26 of 32) 105590 NR_052021 5788 Hs.654514 NM_002838 ENSG00000081237 PTPRC B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 protein tyrosine phosphatase receptor type C protein-coding chr1-9527 chr1 39269291 39269501 + 8.72 0.000 intron (NM_012090, intron 5 of 92) intron (NM_012090, intron 5 of 92) -139677 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr8-4382 chr8 102645713 102645923 + 8.72 0.000 Intergenic L2a|LINE|L2 8146 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr6-5536 chr6 168069039 168069249 + 8.72 0.000 intron (NR_110312, intron 3 of 15) MIRc|SINE|MIR 6691 NM_001122841 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr1-9234 chr1 23126917 23127127 + 8.72 0.000 intron (NM_033631, intron 1 of 4) intron (NM_033631, intron 1 of 4) 41834 NM_033631 7798 Hs.257900 NM_033631 ENSG00000169641 LUZP1 LUZP leucine zipper protein 1 protein-coding chr7-2403 chr7 56062582 56062792 + 8.72 0.000 exon (NM_001009186, exon 12 of 13) exon (NM_001009186, exon 12 of 13) -1599 NM_015411 25870 Hs.279696 NM_015411 ENSG00000129103 SUMF2 pFGE sulfatase modifying factor 2 protein-coding chr4-3459 chr4 105716981 105717191 + 8.72 0.000 intron (NM_001031720, intron 1 of 11) intron (NM_001031720, intron 1 of 11) 6273 NM_001031720 79807 Hs.161429 NM_024751 ENSG00000138780 GSTCD - glutathione S-transferase C-terminal domain containing protein-coding chr5-8158 chr5 102617336 102617546 + 8.72 0.000 non-coding (NR_047462, exon 2 of 2) non-coding (NR_047462, exon 2 of 2) 36073 NR_047462 100861468 Hs.519483 NR_047462 ENSG00000250958 LINC00492 - long intergenic non-protein coding RNA 492 ncRNA chr7-5498 chr7 43492046 43492256 + 8.72 0.000 exon (NM_015052, exon 18 of 30) exon (NM_015052, exon 18 of 30) 30391 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr5-4139 chr5 88418178 88418388 + 8.72 0.000 intron (NR_105020, intron 2 of 2) AluJr|SINE|Alu 20807 NR_105021 102546226 Hs.535810 NR_105021 ENSG00000250156 LINC02060 - long intergenic non-protein coding RNA 2060 ncRNA chr20-1022 chr20 25040300 25040510 + 8.72 0.000 intron (NM_032501, intron 2 of 13) intron (NM_032501, intron 2 of 13) -7699 NM_001252676 84532 Hs.529353 NM_032501 ENSG00000154930 ACSS1 ACAS2L|ACECS1|AceCS2L acyl-CoA synthetase short chain family member 1 protein-coding chr5-5786 chr5 174672992 174673202 + 8.72 0.000 Intergenic L1PB1|LINE|L1 -51485 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr12-2339 chr12 3294134 3294344 + 8.72 0.000 Intergenic Intergenic 71883 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr11-8172 chr11 61970271 61970481 + 8.72 0.000 Intergenic L1M5|LINE|L1 -2742 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr5-7190 chr5 6489415 6489625 + 8.72 0.000 intron (NM_001145161, intron 1 of 1) intron (NM_001145161, intron 1 of 1) 40661 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr22-3679 chr22 23583723 23583933 + 8.72 0.000 Intergenic Intergenic -3538 NM_152855 3543 Hs.348935 NM_020070 ENSG00000128322 IGLL1 14.1|AGM2|CD179b|IGL1|IGL5|IGLJ14.1|IGLL|IGO|IGVPB|VPREB2 immunoglobulin lambda like polypeptide 1 protein-coding chr8-3623 chr8 144231256 144231466 + 8.72 0.000 intron (NM_001288814, intron 13 of 41) SVA_D|Retroposon|SVA 31376 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr4-4775 chr4 100075155 100075365 + 8.72 0.000 Intergenic LTR78|LTR|ERV1 -114773 NR_125924 101929353 Hs.147584 NR_125924 ENSG00000249710 LOC101929353 - uncharacterized LOC101929353 ncRNA chr4-8146 chr4 128527617 128527827 + 8.72 0.000 Intergenic L1ME3A|LINE|L1 99706 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr5-7922 chr5 78492410 78492620 + 8.72 0.000 intron (NM_005779, intron 4 of 4) intron (NM_005779, intron 4 of 4) 131898 NM_001290229 9522 Hs.482587 NM_004866 ENSG00000085365 SCAMP1 SCAMP|SCAMP37 secretory carrier membrane protein 1 protein-coding chr12-4756 chr12 52436538 52436748 + 8.72 0.000 Intergenic Intergenic -2272 NM_004693 9119 Hs.697046 NM_004693 ENSG00000170454 KRT75 K6HF|KB18|PFB keratin 75 protein-coding chr2-6903 chr2 99442931 99443141 + 8.72 0.000 intron (NR_135652, intron 4 of 21) intron (NR_135652, intron 4 of 21) 46981 NM_001321455 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr15-4168 chr15 93078656 93078866 + 8.72 0.000 intron (NM_020211, intron 1 of 3) CR1_Mam|LINE|CR1 -4774 NM_001166283 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr12-7609 chr12 79114263 79114473 + 8.72 0.000 intron (NM_005639, intron 3 of 10) intron (NM_005639, intron 3 of 10) 68676 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr9-7526 chr9 33751784 33751994 + 8.72 0.000 intron (NM_001197098, intron 1 of 4) intron (NM_001197098, intron 1 of 4) 1068 NM_001197098 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr6-3373 chr6 40536177 40536387 + 8.72 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 51082 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr7-7370 chr7 57969736 57969946 + 8.72 0.000 Intergenic ALR/Alpha|Satellite|centr 519664 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr7-5952 chr7 100544381 100544591 + 8.72 0.000 intron (NM_006076, intron 1 of 11) intron (NM_006076, intron 1 of 11) 5283 NM_006076 3268 Hs.521083 NM_006076 ENSG00000106351 AGFG2 HRBL|RABR ArfGAP with FG repeats 2 protein-coding chr18-2516 chr18 68426916 68427126 + 8.72 0.000 Intergenic HERVL40-int|LTR|ERVL 288087 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr16-2801 chr16 58586837 58587047 + 8.72 0.000 intron (NM_206999, intron 6 of 30) L1MB2|LINE|L1 -27011 NR_002980 677830 Hs.677515 NR_002980 ENSG00000281910 SNORA50A ACA50|SNORA50|SNORA76A small nucleolar RNA, H/ACA box 50A snoRNA chr6-3257 chr6 149702060 149702270 + 8.72 0.000 non-coding (NR_073033, exon 2 of 9) non-coding (NR_073033, exon 2 of 9) 14260 NR_073033 9113 Hs.549084 NM_004690 ENSG00000131023 LATS1 WARTS|wts large tumor suppressor kinase 1 protein-coding chr16-3968 chr16 88221354 88221564 + 8.72 0.000 Intergenic Intergenic 27178 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr1-9438 chr1 34168433 34168643 + 8.72 0.000 intron (NM_032884, intron 1 of 6) MLT1B|LTR|ERVL-MaLR 1545 NM_032884 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr13-1515 chr13 21297058 21297268 + 8.72 0.000 promoter-TSS (NR_038939) promoter-TSS (NR_038939) 928 NM_001365454 101928764 NM_001365454 LOC101928764 - coiled-coil domain-containing protein 144B protein-coding chr6-7689 chr6 86033475 86033685 + 8.72 0.000 Intergenic L1PA7|LINE|L1 -354847 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr1-12600 chr1 35466972 35467182 + 8.72 0.000 intron (NM_024874, intron 6 of 20) A-rich|Low_complexity|Low_complexity 90326 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr8-5153 chr8 80965968 80966178 + 8.72 0.000 Intergenic Intergenic -91292 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr20-4297 chr20 50855341 50855551 + 8.72 0.000 intron (NM_198799, intron 4 of 4) intron (NM_198799, intron 4 of 4) 54345 NM_001282532 23394 Hs.293736 NM_015339 ENSG00000101126 ADNP ADNP1|HVDAS|MRD28 activity dependent neuroprotector homeobox protein-coding chr5-4583 chr5 26872956 26873166 + 8.72 0.000 Intergenic LTR52|LTR|ERVL 165525 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr22-1947 chr22 47575347 47575557 + 8.72 0.000 Intergenic L3|LINE|CR1 56117 NR_033377 400932 Hs.561058 NM_001001693 ENSG00000205634 LINC00898 - long intergenic non-protein coding RNA 898 ncRNA chr3-6635 chr3 127518222 127518432 + 8.72 0.000 intron (NR_125397, intron 5 of 6) intron (NR_125397, intron 5 of 6) 19453 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr1-9923 chr1 75442212 75442422 + 8.72 0.000 intron (NM_001320285, intron 2 of 25) MER31A|LTR|ERV1 168797 NM_001320287 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr11-3109 chr11 33533790 33534000 + 8.72 0.000 intron (NM_012194, intron 1 of 20) intron (NM_012194, intron 1 of 20) 157787 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr3-8360 chr3 81417230 81417440 + 8.72 0.000 Intergenic Intergenic 344310 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr8-6981 chr8 107826949 107827159 + 8.72 0.000 Intergenic Intergenic 254885 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr16-3693 chr16 1124430 1124640 + 8.72 0.000 Intergenic Intergenic -28291 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chrX-1878 chrX 126579279 126579489 + 8.72 0.000 Intergenic L1M4c|LINE|L1 -26570 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr1-14973 chr1 89286975 89287185 + 8.72 0.000 Intergenic Intergenic 3282 NR_077244 729930 Hs.745054 NR_077244 LOC729930 - chromosome 11 open reading frame 74 pseudogene pseudo chr5-5119 chr5 102442895 102443105 + 8.72 0.000 intron (NM_173488, intron 6 of 13) AluY|SINE|Alu 56001 NM_173488 133482 Hs.388874 NM_173488 ENSG00000205359 SLCO6A1 CT48|GST|OATP-I|OATP6A1|OATPY solute carrier organic anion transporter family member 6A1 protein-coding chr7-6647 chr7 129914760 129914970 + 8.72 0.000 intron (NM_001202498, intron 1 of 6) MIR|SINE|MIR 38095 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr12-5373 chr12 119882598 119882808 + 8.72 0.000 Intergenic L1MB7|LINE|L1 -5383 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr9-2378 chr9 124852985 124853195 + 8.72 0.000 promoter-TSS (NM_001276374) promoter-TSS (NM_001276374) -327 NM_001276376 401551 Hs.343383 NM_001045476 ENSG00000136918 WDR38 - WD repeat domain 38 protein-coding chr7-5663 chr7 57190947 57191157 + 8.72 0.000 Intergenic Intergenic -10896 NR_030766 642006 Hs.562648 NR_030766 GUSBP10 - GUSB pseudogene 10 pseudo chr13-2841 chr13 108791424 108791634 + 8.72 0.000 intron (NM_015011, intron 5 of 34) MIRb|SINE|MIR 161918 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr1-10627 chr1 179809969 179810179 + 8.72 0.000 TTS (NR_138089) TTS (NR_138089) 6150 NR_162130 113219451 NR_162130 MIR12116 - microRNA 12116 ncRNA chr14-1299 chr14 21218112 21218322 + 8.72 0.000 intron (NM_031314, intron 5 of 8) AluSz|SINE|Alu -11317 NR_038971 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA chr15-2989 chr15 53433132 53433342 + 8.72 0.000 Intergenic Intergenic 107615 NR_102336 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr15-1575 chr15 73309003 73309213 + 8.72 0.000 Intergenic Intergenic 9198 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr1-10844 chr1 204365924 204366134 + 8.72 0.000 Intergenic L2a|LINE|L2 3690 NR_027022 127841 Hs.213144 NR_027022 ENSG00000280924 LINC00628 - long intergenic non-protein coding RNA 628 ncRNA chr7-3752 chr7 75753314 75753524 + 8.72 0.000 Intergenic AluJo|SINE|Alu -14478 NM_001243198 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr2-13375 chr2 137521850 137522060 + 8.72 0.000 intron (NM_001316349, intron 15 of 27) intron (NM_001316349, intron 15 of 27) 405977 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr15-3332 chr15 80369172 80369382 + 8.72 0.000 Intergenic LTR8|LTR|ERV1 -27472 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA chr17-7727 chr17 33339083 33339293 + 8.72 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -46200 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr3-4363 chr3 185581197 185581407 + 8.72 0.000 Intergenic Intergenic -4993 NM_021627 59343 Hs.401388 NM_021627 ENSG00000163904 SENP2 AXAM2|SMT3IP2 SUMO specific peptidase 2 protein-coding chr17-3480 chr17 44382695 44382905 + 8.72 0.000 intron (NM_000419, intron 12 of 29) L2|LINE|L2 6849 NM_000419 3674 Hs.411312 NM_000419 ENSG00000005961 ITGA2B BDPLT16|BDPLT2|CD41|CD41B|GP2B|GPIIb|GT|GTA|HPA3|PPP1R93 integrin subunit alpha 2b protein-coding chr7-5137 chr7 5438337 5438547 + 8.72 0.000 Intergenic Intergenic -9515 NM_001354886 100129484 Hs.147507 NM_001354886 LOC100129484 - uncharacterized LOC100129484 protein-coding chr12-7997 chr12 111760306 111760516 + 8.72 0.000 Intergenic MER5A1|DNA|hAT-Charlie -6522 NM_000690 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr4-7759 chr4 94219493 94219703 + 8.72 0.000 intron (NR_045644, intron 3 of 24) intron (NR_045644, intron 3 of 24) 11514 NR_045644 56916 Hs.410406 NM_020159 ENSG00000163104 SMARCAD1 ADERM|BASNS|ETL1|HEL1|HRZ SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding chr1-9851 chr1 64388266 64388476 + 8.72 0.000 Intergenic Intergenic -81758 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr22-2751 chr22 39892801 39893011 + 8.72 0.000 intron (NM_152512, intron 1 of 6) intron (NM_152512, intron 1 of 6) 854 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr5-3658 chr5 152523981 152524191 + 8.72 0.000 Intergenic HAL1|LINE|L1 -118807 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr20-2507 chr20 34052484 34052694 + 8.72 0.000 intron (NM_007367, intron 2 of 8) intron (NM_007367, intron 2 of 8) 3470 NR_039911 100616434 NR_039911 ENSG00000264616 MIR4755 mir-4755 microRNA 4755 ncRNA chr10-4929 chr10 24412584 24412794 + 8.72 0.000 intron (NM_019590, intron 3 of 20) L2a|LINE|L2 -36725 NM_001282769 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr1-7461 chr1 71041810 71042020 + 8.72 0.000 intron (NM_198719, intron 1 of 3) intron (NM_198719, intron 1 of 3) -4591 NR_038420 100132618 Hs.720513 NR_038420 ZRANB2-AS1 - ZRANB2 antisense RNA 1 ncRNA chr7-2559 chr7 101817505 101817715 + 8.72 0.000 promoter-TSS (NM_181552) promoter-TSS (NM_181552) -16 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chrX-1804 chrX 87707082 87707292 + 8.72 0.000 Intergenic L1M2|LINE|L1 189385 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr9-6823 chr9 37174745 37174955 + 8.72 0.000 intron (NM_001289120, intron 2 of 8) intron (NM_001289120, intron 2 of 8) 54252 NM_001289121 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chrX-4879 chrX 106477931 106478141 + 8.72 0.000 Intergenic LTR73|LTR|ERV1 -133894 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr18-1513 chr18 5600486 5600696 + 8.72 0.000 intron (NM_001281535, intron 3 of 21) intron (NM_001281535, intron 3 of 21) 28400 NM_001281535 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr20-455 chr20 46709796 46710006 + 8.72 0.000 intron (NM_030777, intron 1 of 4) CpG 252 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATORS|ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr19-5049 chr19 49480179 49480389 + 8.72 0.000 intron (NM_001459, intron 6 of 8) intron (NM_001459, intron 6 of 8) 5698 NM_001204503 2323 Hs.428 NM_001459 ENSG00000090554 FLT3LG FL|FLG3L|FLT3L fms related tyrosine kinase 3 ligand protein-coding chr15-2646 chr15 72866654 72866864 + 8.72 0.000 Intergenic Intergenic -83001 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr16-2417 chr16 72876164 72876374 + 8.72 0.000 intron (NM_001164766, intron 3 of 8) intron (NM_001164766, intron 3 of 8) 171859 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr4-5276 chr4 174713126 174713336 + 8.72 0.000 intron (NM_006529, intron 5 of 9) intron (NM_006529, intron 5 of 9) 116016 NM_006529 8001 Hs.413099 NM_006529 ENSG00000145451 GLRA3 - glycine receptor alpha 3 protein-coding chr2-12376 chr2 52824994 52825204 + 8.72 0.000 Intergenic Intergenic -122484 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr3-3241 chr3 41711096 41711306 + 8.72 0.000 intron (NR_136342, intron 24 of 34) L2|LINE|L2 250902 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr6-5801 chr6 11865853 11866063 + 8.72 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger -86911 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chrX-2608 chrX 107233188 107233398 + 8.72 0.000 intron (NM_173494, intron 5 of 6) L1MA9|LINE|L1 26661 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr1-14068 chr1 29192269 29192479 + 8.72 0.000 TTS (NM_001024732) TTS (NM_001024732) -10474 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding chr20-1703 chr20 36641240 36641450 + 8.72 0.000 5' UTR (NM_032214, exon 2 of 8) 5' UTR (NM_032214, exon 2 of 8) 4851 NM_032214 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr5-4686 chr5 38806718 38806928 + 8.72 0.000 intron (NR_109951, intron 1 of 3) intron (NR_109951, intron 1 of 3) 39006 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA chr1-10695 chr1 190519830 190520040 + 8.72 0.000 Intergenic (AAACA)n|Simple_repeat|Simple_repeat 41384 NR_110717 101929120 Hs.602301 NR_110716 LINC01351 - long intergenic non-protein coding RNA 1351 ncRNA chr6-2120 chr6 2275138 2275348 + 8.72 0.000 intron (NR_046229, intron 3 of 6) intron (NR_046229, intron 3 of 6) 29490 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr9-5653 chr9 122206691 122206901 + 8.72 0.000 intron (NM_199160, intron 8 of 8) intron (NM_199160, intron 8 of 8) 14944 NM_001242335 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr2-10169 chr2 86786180 86786390 + 8.72 0.000 intron (NM_001145873, intron 8 of 8) MIRb|SINE|MIR 5429 NM_171827 925 Hs.85258 NM_001768 ENSG00000153563 CD8A CD8|Leu2|p32 CD8a molecule protein-coding chr7-4348 chr7 46703786 46703996 + 8.72 0.000 Intergenic MIR|SINE|MIR -6769 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr1-7226 chr1 224222916 224223126 + 8.72 0.000 intron (NR_110668, intron 1 of 2) intron (NR_110668, intron 1 of 2) 3408 NR_110668 101927164 Hs.710128 NR_110668 ENSG00000237101 LOC101927164 - uncharacterized LOC101927164 ncRNA chr1-9795 chr1 57971026 57971236 + 8.72 0.000 intron (NM_001353980, intron 1 of 5) MIRb|SINE|MIR 110550 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr2-9835 chr2 159072796 159073006 + 8.72 0.000 intron (NM_001350065, intron 4 of 27) intron (NM_001350065, intron 4 of 27) 104261 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr15-1409 chr15 45442947 45443157 + 8.72 0.000 Intergenic MER5A|DNA|hAT-Charlie 10002 NR_030599 100126311 NR_030599 ENSG00000284386 MIR147B MIRN147B|mir-147b microRNA 147b ncRNA chr22-1000 chr22 45955313 45955523 + 8.72 0.000 intron (NM_058238, intron 1 of 3) intron (NM_058238, intron 1 of 3) 21744 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr12-4624 chr12 41556106 41556316 + 8.72 0.000 intron (NM_001164595, intron 7 of 9) intron (NM_001164595, intron 7 of 9) 118472 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr5-4859 chr5 64441213 64441423 + 8.72 0.000 Intergenic HUERS-P1-int|LTR|ERV1 -64697 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr22-3164 chr22 29140589 29140799 + 8.72 0.000 intron (NM_001039570, intron 8 of 8) intron (NM_001039570, intron 8 of 8) -65202 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chrX-5150 chrX 131100735 131100945 + 8.72 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 18405 NM_001330651 158763 Hs.22905 NM_144967 ENSG00000147256 ARHGAP36 - Rho GTPase activating protein 36 protein-coding chr12-2277 chr12 108653217 108653427 + 8.72 0.000 intron (NM_001105237, intron 7 of 10) intron (NM_001105237, intron 7 of 10) 17512 NR_039717 100616240 NR_039717 ENSG00000284388 MIR4496 - microRNA 4496 ncRNA chr4-3155 chr4 182818948 182819158 + 8.72 0.000 Intergenic L2c|LINE|L2 98200 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr18-2172 chr18 59229958 59230168 + 8.72 0.000 intron (NM_001012512, intron 2 of 2) intron (NM_001012512, intron 2 of 2) 9905 NM_002091 2922 Hs.153444 NM_002091 ENSG00000134443 GRP BN|GRP-10|preproGRP|proGRP gastrin releasing peptide protein-coding chr9-5084 chr9 34484710 34484920 + 8.72 0.000 intron (NM_001281428, intron 2 of 19) intron (NM_001281428, intron 2 of 19) 26010 NM_012144 27019 Hs.112667 NM_012144 ENSG00000122735 DNAI1 CILD1|DIC1|ICS1|PCD dynein axonemal intermediate chain 1 protein-coding chr9-4679 chr9 123698517 123698727 + 8.72 0.000 intron (NM_001352968, intron 4 of 18) intron (NM_001352968, intron 4 of 18) -213000 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr11-10455 chr11 117462779 117462989 + 8.72 0.000 intron (NM_020693, intron 17 of 32) intron (NM_020693, intron 17 of 32) 135030 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chrX-2483 chrX 87462567 87462777 + 8.72 0.000 Intergenic L1M3c|LINE|L1 -55130 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chrX-5066 chrX 124342831 124343041 + 8.72 0.000 Intergenic L2c|LINE|L2 -3346 NM_001114937 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr9-4491 chr9 36390113 36390323 + 8.72 0.000 intron (NM_194332, intron 1 of 10) intron (NM_194332, intron 1 of 10) 10051 NM_194329 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr12-8032 chr12 113899940 113900150 + 8.72 0.000 intron (NM_001146698, intron 21 of 24) intron (NM_001146698, intron 21 of 24) 66280 NM_001146699 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr17-5311 chr17 27761606 27761816 + 8.72 0.000 intron (NM_000625, intron 22 of 26) intron (NM_000625, intron 22 of 26) 38818 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr6-2293 chr6 95334079 95334289 + 8.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 243267 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr2-14280 chr2 215936888 215937098 + 8.72 0.000 Intergenic AluY|SINE|Alu 76558 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr9-4013 chr9 36572862 36573072 + 8.72 0.000 promoter-TSS (NM_014791) promoter-TSS (NM_014791) 72 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr14-3078 chr14 62272441 62272651 + 8.72 0.000 Intergenic Intergenic -132573 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr14-1206 chr14 74573112 74573322 + 8.72 0.000 intron (NM_000428, intron 3 of 35) intron (NM_000428, intron 3 of 35) 39020 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr5-5788 chr5 174709775 174709985 + 8.72 0.000 Intergenic Intergenic -14702 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr7-8501 chr7 51971521 51971731 + 8.72 0.000 Intergenic LTR78|LTR|ERV1 -578370 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr5-5498 chr5 141711087 141711297 + 8.72 0.000 Intergenic MIRb|SINE|MIR -28962 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr21-517 chr21 35434432 35434642 + 8.72 0.000 intron (NR_073512, intron 2 of 2) MLT2A1|LTR|ERVL 146227 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr1-9107 chr1 17045525 17045735 + 8.72 0.000 intron (NM_003000, intron 1 of 7) intron (NM_003000, intron 1 of 7) 8540 NM_003000 6390 Hs.465924 NM_003000 ENSG00000117118 SDHB CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP succinate dehydrogenase complex iron sulfur subunit B protein-coding chr8-5327 chr8 501474 501684 + 8.72 0.000 intron (NM_001256113, intron 1 of 3) AluSz|SINE|Alu 14173 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chrX-5393 chrX 151586432 151586642 + 8.72 0.000 intron (NM_173493, intron 1 of 15) MIR|SINE|MIR 22862 NM_173493 139135 Hs.160594 NM_173493 ENSG00000166049 PASD1 CT63|CT64|OXTES1 PAS domain containing repressor 1 protein-coding chr12-6032 chr12 109659880 109660090 + 8.72 0.000 Intergenic Intergenic -53840 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr5-6516 chr5 3576447 3576657 + 8.72 0.000 Intergenic Intergenic -19280 NM_024337 79192 Hs.424156 NM_024337 ENSG00000170549 IRX1 IRX-5|IRXA1 iroquois homeobox 1 protein-coding chr4-7711 chr4 89344787 89344997 + 8.72 0.000 Intergenic L1M3f|LINE|L1 -37092 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr10-5631 chr10 96261938 96262148 + 8.72 0.000 intron (NM_013314, intron 1 of 16) intron (NM_013314, intron 1 of 16) 9473 NM_001258442 29760 Hs.665244 NM_013314 ENSG00000095585 BLNK AGM4|BASH|BLNK-S|LY57|SLP-65|SLP65|bca B cell linker protein-coding chr4-8451 chr4 155298311 155298521 + 8.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -55800 NR_125937 102724776 Hs.61271 NR_125937 ENSG00000250910 LOC102724776 - uncharacterized LOC102724776 ncRNA chr16-2725 chr16 89138337 89138547 + 8.72 0.000 intron (NR_045667, intron 1 of 4) intron (NR_045667, intron 1 of 4) 1894 NR_045667 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr10-2970 chr10 71058679 71058889 + 8.72 0.000 Intergenic L1ME4a|LINE|L1 119731 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr16-6164 chr16 23890170 23890380 + 8.72 0.000 intron (NM_002738, intron 2 of 16) intron (NM_002738, intron 2 of 16) 54292 NM_002738 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr5-8077 chr5 95287543 95287753 + 8.72 0.000 Intergenic Intergenic -3073 NM_024717 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr10-2777 chr10 125664576 125664786 + 8.72 0.000 intron (NM_001128202, intron 1 of 3) THE1D|LTR|ERVL-MaLR 18482 NM_001128202 387718 Hs.148259 NM_001128202 ENSG00000175018 TEX36 C10orf122|bA383C5.1 testis expressed 36 protein-coding chr8-3748 chr8 22753005 22753215 + 8.72 0.000 intron (NM_001363233, intron 4 of 6) L2a|LINE|L2 -59630 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr17-5527 chr17 43035504 43035714 + 8.72 0.000 Intergenic AluJr|SINE|Alu 10378 NM_005440 8153 Hs.603111 NM_005440 ENSG00000108830 RND2 ARHN|RHO7|RhoN Rho family GTPase 2 protein-coding chr9-8340 chr9 116144275 116144485 + 8.72 0.000 Intergenic Intergenic -9411 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr19-4799 chr19 34985604 34985814 + 8.72 0.000 Intergenic L1MEd|LINE|L1 -9018 NM_001320036 57655 Hs.515351 NM_020895 ENSG00000089351 GRAMD1A KIAA1533 GRAM domain containing 1A protein-coding chr9-4424 chr9 10593265 10593475 + 8.72 0.000 intron (NM_002839, intron 2 of 45) intron (NM_002839, intron 2 of 45) 19632 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr7-9163 chr7 113155684 113155894 + 8.72 0.000 Intergenic Intergenic -37207 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding chr1-13222 chr1 212561670 212561880 + 8.72 0.000 Intergenic Intergenic -3559 NM_001030287 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chr2-8975 chr2 190527911 190528121 + 8.72 0.000 intron (NR_136298, intron 1 of 8) intron (NR_136298, intron 1 of 8) 6706 NR_136298 100131211 Hs.659824 NM_001142645 ENSG00000189362 NEMP2 TMEM194B nuclear envelope integral membrane protein 2 protein-coding chr20-1613 chr20 10636918 10637128 + 8.72 0.000 TTS (NM_000214) TTS (NM_000214) 12672 NR_106930 102465525 NR_106930 ENSG00000273745 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA chrX-2729 chrX 124344322 124344532 + 8.72 0.000 Intergenic Intergenic -1855 NM_001114937 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr20-2498 chr20 33373917 33374127 + 8.72 0.000 intron (NM_001365728, intron 10 of 14) L2b|LINE|L2 27497 NM_016408 51654 Hs.435952 NM_016082 ENSG00000101391 CDK5RAP1 C20orf34|C42|CGI-05|HSPC167 CDK5 regulatory subunit associated protein 1 protein-coding chr18-2044 chr18 46558795 46559005 + 8.72 0.000 intron (NM_001145472, intron 1 of 23) intron (NM_001145472, intron 1 of 23) 412 NM_001145472 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr16-3808 chr16 50313682 50313892 + 8.72 0.000 intron (NM_001114, intron 22 of 25) intron (NM_001114, intron 22 of 25) 21171 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chr1-9162 chr1 19988123 19988333 + 8.72 0.000 Intergenic L2c|LINE|L2 -7794 NM_001161727 5320 Hs.466804 NM_000300 ENSG00000188257 PLA2G2A MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2 phospholipase A2 group IIA protein-coding chr18-2624 chr18 35171735 35171945 + 8.72 0.000 Intergenic Intergenic -69194 NM_032347 84307 Hs.591061 NM_032347 ENSG00000186812 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding chr3-6319 chr3 78050647 78050857 + 8.72 0.000 Intergenic Intergenic -1789 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chrX-3494 chrX 39196777 39196987 + 8.72 0.000 Intergenic Intergenic 130480 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr11-6973 chr11 115218634 115218844 + 8.72 0.000 intron (NM_001098517, intron 5 of 8) intron (NM_001098517, intron 5 of 8) -114838 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr14-2661 chr14 71651271 71651481 + 8.72 0.000 intron (NM_001354286, intron 9 of 24) intron (NM_001354286, intron 9 of 24) 65078 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr9-5930 chr9 133625745 133625955 + 8.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -10513 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr2-3869 chr2 37830083 37830293 + 8.72 0.000 promoter-TSS (NR_110011) promoter-TSS (NR_110011) -477 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr13-4207 chr13 92620848 92621058 + 8.72 0.000 intron (NM_004466, intron 7 of 7) intron (NM_004466, intron 7 of 7) 99002 NR_049776 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA chr19-4662 chr19 16618649 16618859 + 8.72 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) 9450 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr5-9218 chr5 181247797 181248007 + 8.72 0.000 intron (NR_109909, intron 2 of 2) intron (NR_109909, intron 2 of 2) 1361 NR_109909 101928649 Hs.723307 NR_109909 CTC-338M12.4 - uncharacterized LOC101928649 ncRNA chr7-4685 chr7 41188875 41189085 + 8.72 0.000 Intergenic Intergenic 87376 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr1-9290 chr1 25940295 25940505 + 8.72 0.000 Intergenic Intergenic -33523 NM_203399 3925 Hs.209983 NM_005563 ENSG00000117632 STMN1 C1orf215|LAP18|Lag|OP18|PP17|PP19|PR22|SMN stathmin 1 protein-coding chr18-3399 chr18 61337609 61337819 + 8.72 0.000 intron (NM_031891, intron 1 of 11) intron (NM_031891, intron 1 of 11) 4284 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr9-7477 chr9 28681847 28682057 + 8.72 0.000 intron (NM_001354574, intron 2 of 5) intron (NM_001354574, intron 2 of 5) 37353 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr2-11927 chr2 25130893 25131103 + 8.72 0.000 intron (NM_014971, intron 8 of 22) MER5C|DNA|hAT-Charlie 37582 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr5-8665 chr5 140391354 140391564 + 8.72 0.000 Intergenic Intergenic -10355 NM_020690 404734 Hs.594084 NM_020690 ENSG00000254996 ANKHD1-EIF4EBP3 MASK-BP3|MASK-BP3ARF ANKHD1-EIF4EBP3 readthrough protein-coding chr22-1577 chr22 45425184 45425394 + 8.72 0.000 intron (NM_015653, intron 4 of 6) intron (NM_015653, intron 4 of 6) 11596 NM_015653 26150 Hs.475110 NM_015653 ENSG00000128408 RIBC2 C22orf11|TRIB RIB43A domain with coiled-coils 2 protein-coding chr20-2681 chr20 45954120 45954330 + 8.72 0.000 intron (NM_022095, intron 17 of 27) MER20|DNA|hAT-Charlie 17978 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding chr1-16448 chr1 227299256 227299466 + 8.72 0.000 intron (NM_001366019, intron 1 of 36) intron (NM_001366019, intron 1 of 36) 19131 NM_001366010 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr10-2998 chr10 95136599 95136809 + 8.72 0.000 Intergenic L1PA7|LINE|L1 -57496 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr17-3201 chr17 1463354 1463564 + 8.72 0.000 TTS (NM_001363855) TTS (NM_001363855) -7227 NM_005206 1398 Hs.461896 NM_005206 ENSG00000167193 CRK CRKII|p38 CRK proto-oncogene, adaptor protein protein-coding chr15-889 chr15 98548754 98548964 + 8.72 0.000 Intergenic Intergenic -34523 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding chr11-8220 chr11 65684455 65684665 + 8.72 0.000 Intergenic AluSz6|SINE|Alu -21588 NM_001243985 5970 Hs.502875 NM_021975 ENSG00000173039 RELA CMCU|NFKB3|p65 RELA proto-oncogene, NF-kB subunit protein-coding chrX-1995 chrX 13124005 13124215 + 8.72 0.000 Intergenic Intergenic -79490 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chr11-5674 chr11 129493707 129493917 + 8.72 0.000 Intergenic L1PA6|LINE|L1 117964 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr20-4311 chr20 51501266 51501476 + 8.72 0.000 intron (NM_012340, intron 3 of 10) intron (NM_012340, intron 3 of 10) 41348 NM_012340 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr9-3801 chr9 128210060 128210270 + 8.72 0.000 intron (NM_001288739, intron 1 of 21) AluJb|SINE|Alu -5943 NM_001131015 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr9-6109 chr9 138069026 138069236 + 8.72 0.000 intron (NM_001243812, intron 31 of 45) intron (NM_001243812, intron 31 of 45) -24060 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chr6-3509 chr6 26394028 26394238 + 8.72 0.000 3' UTR (NM_001197239, exon 6 of 6) 3' UTR (NM_001197239, exon 6 of 6) -8142 NM_001145008 11119 Hs.191510 NM_007048 ENSG00000026950 BTN3A1 BT3.1|BTF5|BTN3.1|CD277 butyrophilin subfamily 3 member A1 protein-coding chr2-6892 chr2 95311069 95311279 + 8.72 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) 13827 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr7-4354 chr7 51236376 51236586 + 8.72 0.000 intron (NM_015198, intron 1 of 12) intron (NM_015198, intron 1 of 12) 80328 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr15-4032 chr15 61557555 61557765 + 8.72 0.000 Intergenic Intergenic -172258 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr17-4732 chr17 35726055 35726265 + 8.72 0.000 3' UTR (NM_001282, exon 21 of 21) 3' UTR (NM_001282, exon 21 of 21) -5479 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr18-1788 chr18 11675561 11675771 + 8.72 0.000 Intergenic AluSx1|SINE|Alu -13598 NM_182978 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr11-10296 chr11 106186815 106187025 + 8.72 0.000 Intergenic MER57-int|LTR|ERV1 -54804 NR_135099 105369473 Hs.524010 NR_135099 ENSG00000254580 LINC02719 - long intergenic non-protein coding RNA 2719 ncRNA chr12-5567 chr12 9219915 9220125 + 8.72 0.000 Intergenic L1PA15|LINE|L1 -11625 NM_002864 5858 Hs.707491 NM_002864 ENSG00000126838 PZP CPAMD6 PZP alpha-2-macroglobulin like protein-coding chr8-2757 chr8 114679089 114679299 + 8.72 0.000 Intergenic Intergenic 988819 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr13-1742 chr13 108539549 108539759 + 8.72 0.000 Intergenic Intergenic -56251 NM_015011 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr10-4830 chr10 12872936 12873146 + 8.72 0.000 Intergenic AluSx1|SINE|Alu 128672 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr3-8801 chr3 6107472 6107682 + 8.72 0.000 Intergenic L2a|LINE|L2 697872 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr7-3491 chr7 2680880 2681090 + 8.72 0.000 intron (NM_133463, intron 1 of 6) intron (NM_133463, intron 1 of 6) 1463 NM_133463 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr15-4316 chr15 39818983 39819193 + 8.72 0.000 intron (NM_001271854, intron 1 of 3) intron (NM_001271854, intron 1 of 3) 10188 NM_001271855 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr14-1028 chr14 60657042 60657252 + 8.72 0.000 Intergenic CpG -7670 NM_005982 6495 Hs.633506 NM_005982 ENSG00000126778 SIX1 BOS3|DFNA23|TIP39 SIX homeobox 1 protein-coding chrX-4840 chrX 103452855 103453065 + 8.72 0.000 Intergenic L1ME1|LINE|L1 66529 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chr2-3022 chr2 62409612 62409822 + 8.72 0.000 Intergenic MIR|SINE|MIR 96478 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr6-4945 chr6 101535215 101535425 + 8.72 0.000 intron (NM_001166247, intron 1 of 16) intron (NM_001166247, intron 1 of 16) 136335 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr6-3005 chr6 44302113 44302323 + 8.72 0.000 intron (NM_020745, intron 18 of 21) intron (NM_020745, intron 18 of 21) -4520 NM_182539 202500 Hs.189183 NM_182539 ENSG00000146221 TCTE1 D6S46|DRC5|FAP155 t-complex-associated-testis-expressed 1 protein-coding chr16-4198 chr16 11573225 11573435 + 8.72 0.000 intron (NR_024320, intron 1 of 3) intron (NR_024320, intron 1 of 3) 13043 NM_004862 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr13-3616 chr13 29939441 29939651 + 8.72 0.000 intron (NR_033889, intron 3 of 4) intron (NR_033889, intron 3 of 4) 3015 NR_033889 440131 Hs.132371 NM_001010918 LINC00544 - long intergenic non-protein coding RNA 544 ncRNA chr11-6501 chr11 68622734 68622944 + 8.72 0.000 Intergenic LTR7|LTR|ERV1 -61705 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr11-5751 chr11 2735536 2735746 + 8.72 0.000 intron (NM_181798, intron 11 of 15) MLT1B|LTR|ERVL-MaLR -35643 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr12-3105 chr12 24601005 24601215 + 8.72 0.000 Intergenic Intergenic -16942 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr3-10635 chr3 147492868 147493078 + 8.72 0.000 intron (NR_121655, intron 1 of 2) intron (NR_121655, intron 1 of 2) 71646 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr12-4474 chr12 16274706 16274916 + 8.72 0.000 intron (NM_001170798, intron 1 of 8) MER91B|DNA|hAT-Tip100 2874 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding chr16-5270 chr16 56627302 56627512 + 8.72 0.000 TTS (NM_001363555) TTS (NM_001363555) 1626 NM_001363555 4493 Hs.744893 NM_175617 ENSG00000169715 MT1E MT-1E|MT-IE|MT1|MTD metallothionein 1E protein-coding chr6-5905 chr6 45947259 45947469 + 8.72 0.000 intron (NM_001114086, intron 3 of 5) intron (NM_001114086, intron 3 of 5) -9767 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr22-2892 chr22 46269566 46269776 + 8.72 0.000 intron (NM_017931, intron 2 of 13) intron (NM_017931, intron 2 of 13) 1663 NM_017931 55020 Hs.435832 NM_017931 ENSG00000075234 TTC38 LL22NC03-5H6.5 tetratricopeptide repeat domain 38 protein-coding chr12-4943 chr12 69879313 69879523 + 8.72 0.000 exon (NM_182530, exon 4 of 25) exon (NM_182530, exon 4 of 25) 54191 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr19-6202 chr19 5637522 5637732 + 8.72 0.000 intron (NM_001320571, intron 2 of 18) AluJb|SINE|Alu 14544 NM_001201339 6294 Hs.728802 NM_002967 ENSG00000160633 SAFB HAP|HET|SAB-B1|SAF-B|SAF-B1|SAFB1 scaffold attachment factor B protein-coding chr3-11053 chr3 183513006 183513216 + 8.72 0.000 intron (NM_130446, intron 2 of 6) L1ME4a|LINE|L1 -35624 NR_046687 100874019 NR_046687 ENSG00000242522 KLHL6-AS1 - KLHL6 antisense RNA 1 ncRNA chr3-3071 chr3 129778991 129779201 + 8.72 0.000 intron (NM_001349271, intron 2 of 4) intron (NM_001349271, intron 2 of 4) 15516 NM_001349273 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr1-3796 chr1 11731668 11731878 + 8.72 0.000 Intergenic Intergenic -4312 NM_001040196 57085 Hs.464438 NM_020350 ENSG00000177674 AGTRAP ATRAP angiotensin II receptor associated protein protein-coding chr11-5502 chr11 82808176 82808386 + 8.72 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -74417 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr12-4490 chr12 19894002 19894212 + 8.72 0.000 Intergenic Intergenic -120578 NR_040098 100506393 Hs.658356 NR_040098 ENSG00000256287 LINC02398 - long intergenic non-protein coding RNA 2398 ncRNA chr3-5401 chr3 158631930 158632140 + 8.72 0.000 Intergenic MLT2A2|LTR|ERVL -12493 NM_001308166 85476 Hs.518355 NM_024996 ENSG00000168827 GFM1 COXPD1|EFG|EFG1|EFGM|EGF1|GFM|hEFG1|mtEF-G1 G elongation factor mitochondrial 1 protein-coding chr22-2447 chr22 20125884 20126094 + 8.72 0.000 promoter-TSS (NR_145765) promoter-TSS (NR_145765) -413 NR_145765 109617010 NR_145765 ENSG00000264346 SNORA77B - small nucleolar RNA, H/ACA box 77B snoRNA chr2-6410 chr2 135219333 135219543 + 8.72 0.000 intron (NM_001286569, intron 16 of 21) intron (NM_001286569, intron 16 of 21) 82810 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr7-6632 chr7 122250412 122250622 + 8.72 0.000 Intergenic Intergenic -53141 NR_036484 154860 Hs.664204 NR_036484 ENSG00000230316 FEZF1-AS1 - FEZF1 antisense RNA 1 ncRNA chr5-5314 chr5 127076398 127076608 + 8.72 0.000 Intergenic Intergenic -3011 NM_001164479 401207 Hs.49573 NM_001164478 ENSG00000164241 C5orf63 YDR286C chromosome 5 open reading frame 63 protein-coding chr1-10344 chr1 154017836 154018046 + 8.72 0.000 intron (NM_001159484, intron 33 of 37) L2|LINE|L2 27179 NM_001030 6232 Hs.546291 NM_001030 ENSG00000177954 RPS27 DBA17|MPS-1|MPS1|S27 ribosomal protein S27 protein-coding chr2-10431 chr2 202310197 202310407 + 8.72 0.000 Intergenic L1MC5a|LINE|L1 17251 NR_003031 692058 NR_003031 ENSG00000238317 SNORD11 HBII-95 small nucleolar RNA, C/D box 11 snoRNA chr2-2917 chr2 237885244 237885454 + 8.72 0.000 intron (NM_001308353, intron 3 of 3) (GCCCTG)n|Simple_repeat|Simple_repeat 25726 NM_001308353 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr7-4940 chr7 136664153 136664363 + 8.72 0.000 Intergenic AluJb|SINE|Alu -204394 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr6-8403 chr6 150613065 150613275 + 8.72 0.000 intron (NM_001329799, intron 1 of 15) L2a|LINE|L2 13285 NM_001329804 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr18-1009 chr18 46649502 46649712 + 8.72 0.000 intron (NM_144612, intron 1 of 39) intron (NM_144612, intron 1 of 39) 7426 NM_144612 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr5-3169 chr5 72849611 72849821 + 8.72 0.000 intron (NM_001364293, intron 2 of 24) intron (NM_001364293, intron 2 of 24) 1577 NM_153188 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chr11-6550 chr11 70179971 70180181 + 8.72 0.000 intron (NM_018043, intron 23 of 25) intron (NM_018043, intron 23 of 25) -23087 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr2-11173 chr2 150570770 150570980 + 8.72 0.000 non-coding (NR_110241, exon 3 of 6) non-coding (NR_110241, exon 3 of 6) 1346 NR_110241 101929260 Hs.732324 NR_110241 ENSG00000236049 LINC01920 - long intergenic non-protein coding RNA 1920 ncRNA chr4-7859 chr4 102935835 102936045 + 8.72 0.000 intron (NR_047515, intron 3 of 10) L1PA15|LINE|L1 66948 NM_001008388 493856 Hs.444955 NM_001008388 ENSG00000145354 CISD2 ERIS|Miner1|NAF-1|WFS2|ZCD2 CDGSH iron sulfur domain 2 protein-coding chr2-5154 chr2 27567335 27567545 + 8.72 0.000 Intergenic Intergenic -9082 NM_032266 84226 Hs.131021 NM_032266 ENSG00000221843 C2orf16 - chromosome 2 open reading frame 16 protein-coding chr12-6912 chr12 23852761 23852971 + 8.72 0.000 intron (NM_001330785, intron 2 of 14) MER5A|DNA|hAT-Charlie 96804 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr8-5278 chr8 139799209 139799419 + 8.72 0.000 intron (NM_001160372, intron 21 of 22) MLT1D|LTR|ERVL-MaLR -96191 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr1-15059 chr1 95119705 95119915 + 8.72 0.000 intron (NM_001199691, intron 1 of 7) intron (NM_001199691, intron 1 of 7) 1887 NM_001199691 100527978 Hs.483512 NM_001199691 ENSG00000271092 TLCD4-RWDD3 TMEM56-RWDD3 TLCD4-RWDD3 readthrough protein-coding chrX-2835 chrX 137409770 137409980 + 8.72 0.000 Intergenic L1ME4c|LINE|L1 -156252 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr5-5213 chr5 115020672 115020882 + 8.72 0.000 Intergenic AluSx1|SINE|Alu 149131 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr12-6755 chr12 6814902 6815112 + 8.72 0.000 intron (NM_000616, intron 5 of 9) intron (NM_000616, intron 5 of 9) -6814 NM_019858 27239 Hs.631654 NM_014449 ENSG00000250510 GPR162 A-2|GRCA G protein-coupled receptor 162 protein-coding chr1-15284 chr1 115764938 115765148 + 8.72 0.000 intron (NM_001232, intron 1 of 10) intron (NM_001232, intron 1 of 10) 3762 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr15-3301 chr15 78279732 78279942 + 8.72 0.000 intron (NM_018602, intron 6 of 7) (GAGCCA)n|Simple_repeat|Simple_repeat 13619 NM_001130183 55466 Hs.513053 NM_018602 ENSG00000140403 DNAJA4 MST104|MSTP104|PRO1472 DnaJ heat shock protein family (Hsp40) member A4 protein-coding chr9-5023 chr9 27281904 27282114 + 8.72 0.000 intron (NR_026679, intron 1 of 16) intron (NR_026679, intron 1 of 16) 784 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA chrX-563 chrX 41084576 41084786 + 8.72 0.000 promoter-TSS (NM_001039590) promoter-TSS (NM_001039590) -764 NM_001039590 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr1-5793 chr1 173959061 173959271 + 8.72 0.000 intron (NM_001300852, intron 12 of 18) L1M5|LINE|L1 33906 NM_001300851 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding chr12-8296 chr12 127458945 127459155 + 8.72 0.000 Intergenic L1ME1|LINE|L1 -118978 NR_110057 101927616 Hs.637827 NR_110057 ENSG00000256362 LINC02375 - long intergenic non-protein coding RNA 2375 ncRNA chr1-11007 chr1 219640189 219640399 + 8.72 0.000 Intergenic Intergenic -27149 NM_001355457 643136 Hs.647764 NM_001085394 ENSG00000215817 ZC3H11B ZC3HDC11B zinc finger CCCH-type containing 11B protein-coding chr4-875 chr4 145733035 145733245 + 8.72 0.000 TTS (NM_001080531) TTS (NM_001080531) 52936 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr8-4456 chr8 115745030 115745240 + 8.72 0.000 Intergenic Intergenic -76160 NM_014112 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr14-4769 chr14 63578356 63578566 + 8.72 0.000 Intergenic Intergenic -35066 NM_001354926 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr3-3350 chr3 19234527 19234737 + 8.72 0.000 intron (NM_144633, intron 1 of 15) LTR12D|LTR|ERV1 80299 NR_039954 100616291 NR_039954 ENSG00000271898 MIR4791 mir-4791 microRNA 4791 ncRNA chr18-2366 chr18 58753925 58754135 + 8.72 0.000 3' UTR (NM_173844, exon 16 of 16) 3' UTR (NM_173844, exon 16 of 16) -59850 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr5-1855 chr5 137040873 137041083 + 8.72 0.000 intron (NM_004598, intron 6 of 10) intron (NM_004598, intron 6 of 10) -87219 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr22-1772 chr22 28952137 28952347 + 8.72 0.000 intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 34853 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr20-3552 chr20 2677693 2677903 + 8.72 0.000 Intergenic HERVL40-int|LTR|ERVL -13575 NM_001258384 3420 Hs.436405 NM_006899 ENSG00000101365 IDH3B RP46 isocitrate dehydrogenase (NAD(+)) 3 beta protein-coding chr15-4273 chr15 35860780 35860990 + 8.72 0.000 Intergenic L1MC1|LINE|L1 -65971 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr10-4801 chr10 7951564 7951774 + 8.72 0.000 intron (NM_031923, intron 2 of 6) MLT1H2|LTR|ERVL-MaLR 100822 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 - GATA3 antisense RNA 1 ncRNA chr1-12670 chr1 46108298 46108508 + 8.72 0.000 intron (NM_001303427, intron 1 of 9) L2c|LINE|L2 22270 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr21-1722 chr21 32860348 32860558 + 8.72 0.000 Intergenic LTR28C|LTR|ERV1 -46750 NM_019596 56245 Hs.517235 NM_019596 ENSG00000205929 C21orf62 B37|C21orf120|PRED81 chromosome 21 open reading frame 62 protein-coding chr8-2645 chr8 69733383 69733593 + 8.72 0.000 intron (NM_001146009, intron 3 of 7) MIRc|SINE|MIR 99681 NM_001146009 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr8-3074 chr8 21782010 21782220 + 8.72 0.000 intron (NM_001165038, intron 1 of 7) intron (NM_001165038, intron 1 of 7) 6760 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr11-5812 chr11 7095051 7095261 + 8.72 0.000 Intergenic Intergenic 6158 NM_014469 27288 Hs.121605 NM_014469 ENSG00000170748 RBMXL2 HNRNPG-T|HNRNPGT|HNRPGT RBMX like 2 protein-coding chr16-2586 chr16 86033857 86034067 + 8.72 0.000 Intergenic Intergenic 115615 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr6-5019 chr6 110470389 110470599 + 8.72 0.000 intron (NM_033125, intron 1 of 7) intron (NM_033125, intron 1 of 7) 6119 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr7-3829 chr7 99244940 99245150 + 8.72 0.000 Intergenic Intergenic -28256 NR_002147 84176 Hs.621401 NR_002147 MYH16 MHC20|MYH16P|MYH5 myosin heavy chain 16 pseudogene pseudo chr4-8388 chr4 150782866 150783076 + 8.72 0.000 intron (NM_001367550, intron 34 of 56) intron (NM_001367550, intron 34 of 56) 200820 NM_006439 10586 Hs.584852 NM_006439 ENSG00000181541 MAB21L2 MCOPS14|MCSKS14 mab-21 like 2 protein-coding chr19-1946 chr19 39209047 39209257 + 8.72 0.000 Intergenic AluSq2|SINE|Alu -4886 NM_001080468 342898 Hs.124123 NM_001080468 ENSG00000179751 SYCN INSSA1|SYL syncollin protein-coding chr11-4782 chr11 131909960 131910170 + 8.72 0.000 promoter-TSS (NM_001144058) promoter-TSS (NM_001144058) 141 NR_147850 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr4-3383 chr4 24911655 24911865 + 8.72 0.000 intron (NM_001330644, intron 1 of 12) intron (NM_001330644, intron 1 of 12) 1218 NM_001130726 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr2-6120 chr2 218699947 218700157 + 8.72 0.000 intron (NM_001369423, intron 26 of 26) AluSp|SINE|Alu -10783 NM_014640 9654 Hs.471405 NM_014640 ENSG00000135912 TTLL4 - tubulin tyrosine ligase like 4 protein-coding chr6-2626 chr6 150495268 150495478 + 8.72 0.000 Intergenic MER5A|DNA|hAT-Charlie -104512 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr20-3785 chr20 21535205 21535415 + 8.72 0.000 Intergenic Intergenic -21246 NM_002509 4821 Hs.516922 NM_002509 ENSG00000125820 NKX2-2 NKX2.2|NKX2B NK2 homeobox 2 protein-coding chr2-6616 chr2 238276305 238276515 + 8.72 0.000 intron (NM_022817, intron 3 of 22) intron (NM_022817, intron 3 of 22) 12200 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr5-4999 chr5 81591930 81592140 + 8.72 0.000 intron (NM_012446, intron 4 of 16) L1PA4|LINE|L1 159218 NM_001256736 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr2-8335 chr2 108561149 108561359 + 8.72 0.000 intron (NM_001193483, intron 1 of 9) L1P4|LINE|L1 26899 NM_001193483 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr12-5503 chr12 127880148 127880358 + 8.72 0.000 Intergenic Intergenic -1364 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chr13-3714 chr13 39103637 39103847 + 8.72 0.000 Intergenic L2c|LINE|L2 65286 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr5-6568 chr5 18043381 18043591 + 8.72 0.000 Intergenic Intergenic 236212 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr8-3297 chr8 23437901 23438111 + 8.72 0.000 intron (NM_004901, intron 9 of 12) Tigger13a|DNA|TcMar-Tigger 19641 NM_004901 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr1-16396 chr1 223477069 223477279 + 8.72 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 83759 NM_152610 164127 Hs.192090 NM_152610 ENSG00000178395 CCDC185 C1orf65 coiled-coil domain containing 185 protein-coding chr12-4794 chr12 54412361 54412571 + 8.72 0.000 intron (NM_002205, intron 1 of 29) intron (NM_002205, intron 1 of 29) 6800 NM_002205 3678 Hs.505654 NM_002205 ENSG00000161638 ITGA5 CD49e|FNRA|VLA-5|VLA5A integrin subunit alpha 5 protein-coding chrX-366 chrX 23781463 23781673 + 8.72 0.000 Intergenic Intergenic -1590 NR_027783 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr2-14206 chr2 208459912 208460122 + 8.72 0.000 intron (NM_005048, intron 9 of 12) intron (NM_005048, intron 9 of 12) 53187 NM_005048 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr20-2644 chr20 43755579 43755789 + 8.72 0.000 Intergenic Tigger12|DNA|TcMar-Tigger -28682 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr17-3405 chr17 3796255 3796465 + 8.72 0.000 intron (NM_002208, intron 1 of 30) intron (NM_002208, intron 1 of 30) 4828 NM_002208 3682 Hs.513867 NM_002208 ENSG00000083457 ITGAE CD103|HUMINAE integrin subunit alpha E protein-coding chr17-5120 chr17 6901258 6901468 + 8.72 0.000 Intergenic Intergenic 7586 NR_120453 245 Hs.378695 NR_002710 ENSG00000262943 ALOX12P2 ALOX12E arachidonate 12-lipoxygenase pseudogene 2 pseudo chr3-4739 chr3 72908050 72908260 + 8.72 0.000 intron (NM_001080393, intron 1 of 6) intron (NM_001080393, intron 1 of 6) 20109 NM_001080393 727936 Hs.710275 NM_001080393 ENSG00000172986 GXYLT2 GLT8D4 glucoside xylosyltransferase 2 protein-coding chr13-2737 chr13 96196897 96197107 + 8.72 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 106163 NM_153456 266722 Hs.171001 NM_153456 ENSG00000185352 HS6ST3 HS6ST-3 heparan sulfate 6-O-sulfotransferase 3 protein-coding chr16-2789 chr16 48606938 48607148 + 8.72 0.000 intron (NM_153029, intron 1 of 6) intron (NM_153029, intron 1 of 6) 3137 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr7-5374 chr7 31605692 31605902 + 8.72 0.000 intron (NM_194300, intron 8 of 12) intron (NM_194300, intron 8 of 12) 52795 NM_194300 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr3-7889 chr3 129330560 129330770 + 8.72 0.000 Intergenic Intergenic -14379 NM_006026 8971 Hs.75307 NM_006026 ENSG00000184897 H1FX H1.10|H1X H1 histone family member X protein-coding chr18-1618 chr18 47263492 47263702 + 8.72 0.000 Intergenic CpG -11937 NM_001037802 652991 Hs.585834 NM_001037802 ENSG00000215474 SKOR2 CH18515|CORL2|FUSSEL18 SKI family transcriptional corepressor 2 protein-coding chr6-4649 chr6 49684030 49684240 + 8.72 0.000 Intergenic MIR|SINE|MIR 29408 NM_001142417 7180 Hs.2042 NM_003296 ENSG00000124490 CRISP2 CRISP-2|CT36|GAPDL5|TPX1|TSP1 cysteine rich secretory protein 2 protein-coding chr20-3427 chr20 45494184 45494394 + 8.72 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 21333 NM_006652 10816 Hs.370724 NM_006652 ENSG00000101446 SPINT3 HKIB9 serine peptidase inhibitor, Kunitz type 3 protein-coding chr2-9876 chr2 203834815 203835025 + 8.72 0.000 Intergenic L1PA11|LINE|L1 -32851 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr9-4940 chr9 14258289 14258499 + 8.72 0.000 intron (NR_161383, intron 1 of 7) intron (NR_161383, intron 1 of 7) 41870 NM_001369479 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr7-4769 chr7 75963008 75963218 + 8.72 0.000 intron (NM_000941, intron 2 of 15) intron (NM_000941, intron 2 of 15) 19330 NR_002955 677801 Hs.689708 NR_002955 ENSG00000201643 SNORA14A ACA14a small nucleolar RNA, H/ACA box 14A snoRNA chr14-1975 chr14 40618505 40618715 + 8.72 0.000 Intergenic Intergenic -336101 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr16-3765 chr16 27503836 27504046 + 8.72 0.000 intron (NM_001520, intron 10 of 36) intron (NM_001520, intron 10 of 36) 45972 NM_001520 2975 Hs.371718 NM_001520 ENSG00000077235 GTF3C1 TFIIIC|TFIIIC220|TFIIICalpha general transcription factor IIIC subunit 1 protein-coding chr8-6386 chr8 54675947 54676157 + 8.72 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 59956 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr3-6239 chr3 66966627 66966837 + 8.72 0.000 Intergenic Intergenic -31575 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr17-1990 chr17 61209021 61209231 + 8.72 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 158578 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr16-6513 chr16 61496654 61496864 + 8.72 0.000 Intergenic AluSc5|SINE|Alu -440993 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr11-7103 chr11 123145819 123146029 + 8.72 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 49324 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chrX-3758 chrX 129215013 129215223 + 8.72 0.000 Intergenic L1MD2|LINE|L1 308372 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr13-3852 chr13 50068017 50068227 + 8.72 0.000 non-coding (NR_152572, exon 3 of 6) non-coding (NR_152572, exon 3 of 6) 13919 NR_152571 8847 Hs.547964 NR_002612 ENSG00000231607 DLEU2 ALT1|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 ncRNA chr10-4110 chr10 69515498 69515708 + 8.72 0.000 Intergenic MIRc|SINE|MIR 57819 NM_020999 50674 Hs.532682 NM_020999 ENSG00000122859 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding chr8-4359 chr8 101395964 101396174 + 8.72 0.000 Intergenic L2b|LINE|L2 27176 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr9-7369 chr9 16797429 16797639 + 8.72 0.000 intron (NM_017637, intron 1 of 6) MER117|DNA|hAT-Charlie 70720 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr17-6305 chr17 50524536 50524746 + 8.72 0.000 intron (NM_001366294, intron 12 of 18) intron (NM_001366294, intron 12 of 18) -8094 NM_017957 55040 Hs.670090 NM_017957 ENSG00000049283 EPN3 - epsin 3 protein-coding chr12-4025 chr12 41894740 41894950 + 8.72 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 130656 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr17-3642 chr17 4454048 4454258 + 8.72 0.000 intron (NM_001320449, intron 7 of 10) intron (NM_001320449, intron 7 of 10) 20213 NM_182538 201305 Hs.657543 NM_182538 ENSG00000182557 SPNS3 SLC62A3 sphingolipid transporter 3 (putative) protein-coding chr17-2709 chr17 63369372 63369582 + 8.72 0.000 intron (NM_025185, intron 13 of 25) intron (NM_025185, intron 13 of 25) 70790 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr2-7117 chr2 182890964 182891174 + 8.72 0.000 Intergenic Intergenic -24432 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr10-3986 chr10 124872088 124872298 + 8.72 0.000 Intergenic L1ME2|LINE|L1 -69930 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr2-14467 chr2 224211112 224211322 + 8.72 0.000 Intergenic Intergenic -171898 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr4-7520 chr4 75161877 75162087 + 8.72 0.000 Intergenic Intergenic -77274 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA chr17-1969 chr17 24188162 24188372 + 8.72 0.000 Intergenic ALR/Alpha|Satellite|centr 1665156 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr1-5939 chr1 24862552 24862762 + 8.72 0.000 Intergenic Intergenic 56759 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr1-11579 chr1 202365089 202365299 + 8.72 0.000 intron (NM_002481, intron 1 of 23) AluJb|SINE|Alu 16492 NM_001167857 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr3-8155 chr3 32324438 32324648 + 8.72 0.000 intron (NM_001320308, intron 1 of 2) intron (NM_001320308, intron 1 of 2) -67310 NM_138410 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chrX-4784 chrX 97815094 97815304 + 8.72 0.000 Intergenic Intergenic -250664 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr7-3139 chr7 56074468 56074678 + 8.72 0.000 intron (NM_001366649, intron 4 of 7) intron (NM_001366649, intron 4 of 7) 10287 NM_001042469 25870 Hs.279696 NM_015411 ENSG00000129103 SUMF2 pFGE sulfatase modifying factor 2 protein-coding chr11-4873 chr11 36943906 36944116 + 8.72 0.000 Intergenic L2a|LINE|L2 -345732 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr17-6891 chr17 31962037 31962247 + 8.72 0.000 intron (NM_015355, intron 4 of 15) intron (NM_015355, intron 4 of 15) 25135 NM_015355 23512 Hs.462732 NM_015355 ENSG00000178691 SUZ12 CHET9|JJAZ1 SUZ12 polycomb repressive complex 2 subunit protein-coding chrX-1892 chrX 134243976 134244186 + 8.72 0.000 intron (NM_001353453, intron 2 of 2) intron (NM_001353453, intron 2 of 2) 6868 NM_001353453 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr19-5796 chr19 35104474 35104684 + 8.72 0.000 intron (NR_024562, intron 1 of 3) intron (NR_024562, intron 1 of 3) 1692 NR_024561 100128675 Hs.633989 NR_024561 ENSG00000227392 HPN-AS1 - HPN antisense RNA 1 ncRNA chr11-6887 chr11 103779137 103779347 + 8.72 0.000 Intergenic Intergenic -70664 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr7-3797 chr7 91913617 91913827 + 8.72 0.000 Intergenic Intergenic -27140 NM_147185 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr2-4967 chr2 191867366 191867576 + 8.72 0.000 Intergenic Intergenic -20383 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr12-5935 chr12 74930208 74930418 + 8.72 0.000 Intergenic Intergenic 279435 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding chr11-3254 chr11 73950956 73951166 + 8.72 0.000 5' UTR (NM_153614, exon 1 of 8) 5' UTR (NM_153614, exon 1 of 8) 742 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr7-4281 chr7 12409465 12409675 + 8.72 0.000 Intergenic L2a|LINE|L2 -5629 NM_001346973 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding chr11-4666 chr11 57833490 57833700 + 8.72 0.000 Intergenic Intergenic 71793 NM_001206887 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr16-2678 chr16 71746483 71746693 + 8.72 0.000 exon (NM_001030007, exon 18 of 24) exon (NM_001030007, exon 18 of 24) 11899 NR_003059 692111 NR_003059 ENSG00000223224 SNORD71 HBII-239|MIRN768|hsa-mir-768 small nucleolar RNA, C/D box 71 snoRNA chr3-3789 chr3 13544181 13544391 + 8.72 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -4839 NM_001998 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr19-6807 chr19 41836018 41836228 + 8.72 0.000 TTS (NM_001291419) TTS (NM_001291419) 7604 NM_001291419 147719 Hs.98660 NM_173506 ENSG00000273111 LYPD4 SMR LY6/PLAUR domain containing 4 protein-coding chr3-3772 chr3 11736405 11736615 + 8.72 0.000 Intergenic Intergenic -15971 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chrX-4910 chrX 108556861 108557071 + 8.72 0.000 intron (NM_033380, intron 2 of 50) intron (NM_033380, intron 2 of 50) 117128 NM_033380 1287 Hs.369089 NM_000495 ENSG00000188153 COL4A5 ASLN|ATS|ATS1|CA54 collagen type IV alpha 5 chain protein-coding chr18-2138 chr18 55451376 55451586 + 8.72 0.000 intron (NM_001348217, intron 4 of 18) intron (NM_001348217, intron 4 of 18) -1052 NR_132985 105372127 Hs.666721 NR_132985 ENSG00000267028 TCF4-AS1 MIR4529HG TCF4 antisense RNA 1 ncRNA chr10-1782 chr10 76330098 76330308 + 8.72 0.000 intron (NM_001305581, intron 6 of 6) MER39|LTR|ERV1 547442 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chrX-2014 chrX 15349148 15349358 + 8.72 0.000 intron (NR_037859, intron 13 of 14) L3|LINE|CR1 -13699 NR_033836 5277 Hs.137154 NM_002641 ENSG00000165195 PIGA GPI3|MCAHS2|PIG-A|PNH1 phosphatidylinositol glycan anchor biosynthesis class A protein-coding chr11-6443 chr11 66628482 66628692 + 8.72 0.000 3' UTR (NM_001198837, exon 2 of 2) 3' UTR (NM_001198837, exon 2 of 2) -10030 NM_001198843 5936 Hs.523822 NM_002896 ENSG00000173933 RBM4 LARK|RBM4A|ZCCHC21|ZCRB3A RNA binding motif protein 4 protein-coding chr10-5656 chr10 97578288 97578498 + 8.72 0.000 exon (NM_001291219, exon 3 of 8) exon (NM_001291219, exon 3 of 8) 5614 NM_001346793 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr4-7244 chr4 46204509 46204719 + 8.72 0.000 Intergenic Intergenic -80560 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr4-5251 chr4 169988824 169989034 + 8.72 0.000 3' UTR (NM_001301647, exon 2 of 2) 3' UTR (NM_001301647, exon 2 of 2) -13027 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr18-1407 chr18 792400 792610 + 8.72 0.000 intron (NM_005433, intron 1 of 11) AluJo|SINE|Alu 19737 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr21-416 chr21 45366971 45367181 + 8.72 0.000 Intergenic Intergenic -25086 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chr3-3995 chr3 57756980 57757190 + 8.72 0.000 promoter-TSS (NM_001304421) promoter-TSS (NM_001304421) -171 NM_001304420 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr7-2658 chr7 5170570 5170780 + 8.72 0.000 Intergenic AluSz|SINE|Alu -19558 NM_016003 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr15-2503 chr15 33201792 33202002 + 8.72 0.000 Intergenic Intergenic -7164 NM_001277313 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr3-6879 chr3 153414930 153415140 + 8.72 0.000 intron (NR_146713, intron 5 of 6) L1MEf|LINE|L1 -69460 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr11-5256 chr11 30741213 30741423 + 8.72 0.000 Intergenic Intergenic -154965 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr8-4062 chr8 64632394 64632604 + 8.72 0.000 intron (NM_004820, intron 1 of 5) L1MB1|LINE|L1 -50607 NR_152770 401463 Hs.651960 NR_015374 ENSG00000254102 LOC401463 - uncharacterized LOC401463 ncRNA chr20-3448 chr20 50379233 50379443 + 8.72 0.000 Intergenic Intergenic -57996 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr3-10561 chr3 141201045 141201255 + 8.72 0.000 Intergenic Intergenic -30675 NM_001282728 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr2-8937 chr2 186108588 186108798 + 8.72 0.000 Intergenic L1MA7|LINE|L1 -22376 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr14-4457 chr14 33861947 33862157 + 8.72 0.000 Intergenic Intergenic 89022 NM_001308103 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr8-6016 chr8 23126815 23127025 + 8.72 0.000 Intergenic MER4A|LTR|ERV1 24106 NM_003841 8794 Hs.655801 NM_003841 ENSG00000173535 TNFRSF10C CD263|DCR1|DCR1-TNFR|LIT|TRAIL-R3|TRAILR3|TRID TNF receptor superfamily member 10c protein-coding chr10-4493 chr10 84107895 84108105 + 8.72 0.000 Intergenic LTR49-int|LTR|ERV1 -31509 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr6-3310 chr6 163753027 163753237 + 8.72 0.000 Intergenic AluSx|SINE|Alu -81648 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr9-2767 chr9 107734727 107734937 + 8.72 0.000 Intergenic Intergenic -245063 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr17-5201 chr17 15085130 15085340 + 8.72 0.000 Intergenic Intergenic 20952 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr2-5711 chr2 213899194 213899404 + 8.72 0.000 intron (NR_047660, intron 10 of 14) L3|LINE|CR1 141232 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr12-5541 chr12 132615667 132615877 + 8.72 0.000 Intergenic Intergenic -3004 NM_170683 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr2-12907 chr2 99711360 99711570 + 8.72 0.000 intron (NM_001025108, intron 10 of 23) intron (NM_001025108, intron 10 of 23) -221448 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr9-4567 chr9 89218178 89218388 + 8.72 0.000 Intergenic Intergenic -39465 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr21-1420 chr21 14968866 14969076 + 8.72 0.000 intron (NM_003489, intron 3 of 3) intron (NM_003489, intron 3 of 3) -50303 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr1-10890 chr1 206699636 206699846 + 8.72 0.000 intron (NM_004759, intron 1 of 9) intron (NM_004759, intron 1 of 9) 14836 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr18-3239 chr18 48194112 48194322 + 8.72 0.000 promoter-TSS (NM_001371288) promoter-TSS (NM_001371288) -291 NM_001371288 chr16-5344 chr16 84029829 84030039 + 8.72 0.000 intron (NM_001080442, intron 4 of 9) intron (NM_001080442, intron 4 of 9) 12223 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr2-12678 chr2 75432988 75433198 + 8.72 0.000 Intergenic L1P3b|LINE|L1 -90975 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chrX-1565 chrX 51321642 51321852 + 8.72 0.000 Intergenic AluSp|SINE|Alu -10484 NM_153183 170685 Hs.375178 NM_153183 ENSG00000122824 NUDT10 APS2|DIPP3-alpha|DIPP3a nudix hydrolase 10 protein-coding chr13-3384 chr13 85318835 85319045 + 8.72 0.000 Intergenic Intergenic -44663 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr16-4285 chr16 26923899 26924109 + 8.72 0.000 Intergenic L1M4c|LINE|L1 -142923 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr2-7993 chr2 66557783 66557993 + 8.72 0.000 intron (NM_002398, intron 9 of 12) intron (NM_002398, intron 9 of 12) -16142 NR_110156 100507073 Hs.667940 NR_110156 ENSG00000232046 LINC01798 - long intergenic non-protein coding RNA 1798 ncRNA chr6-7719 chr6 89492040 89492250 + 8.72 0.000 intron (NM_001242809, intron 1 of 15) MER39|LTR|ERV1 58967 NM_014942 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr18-903 chr18 57881955 57882165 + 8.72 0.000 Intergenic Intergenic -78745 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr2-7776 chr2 41014742 41014952 + 8.72 0.000 Intergenic L2a|LINE|L2 -502412 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr11-3918 chr11 120986098 120986308 + 8.72 0.000 exon (NM_014619, exon 21 of 21) exon (NM_014619, exon 21 of 21) -28164 NR_133004 101929208 Hs.662310 NR_133004 LOC101929208 - uncharacterized LOC101929208 ncRNA chr4-3772 chr4 94604994 94605204 + 8.72 0.000 intron (NM_006457, intron 7 of 12) intron (NM_006457, intron 7 of 12) 152434 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr1-5324 chr1 225952690 225952900 + 8.72 0.000 Intergenic Intergenic -11303 NM_001172425 7044 Hs.520187 NM_003240 ENSG00000143768 LEFTY2 EBAF|LEFTA|LEFTYA|TGFB4 left-right determination factor 2 protein-coding chr2-5652 chr2 196125822 196126032 + 8.72 0.000 Intergenic LTR25-int|LTR|ERV1 45651 NM_004226 9262 Hs.88297 NM_004226 ENSG00000081320 STK17B DRAK2 serine/threonine kinase 17b protein-coding chr19-4809 chr19 35259738 35259948 + 8.72 0.000 intron (NM_205835, intron 3 of 7) intron (NM_205835, intron 3 of 7) -9119 NM_003367 7392 Hs.454534 NM_003367 ENSG00000105698 USF2 FIP|bHLHb12 upstream transcription factor 2, c-fos interacting protein-coding chr7-6011 chr7 105219486 105219696 + 8.72 0.000 intron (NM_182692, intron 2 of 15) intron (NM_182692, intron 2 of 15) 49486 NM_001350739 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr1-12649 chr1 43275888 43276098 + 8.72 0.000 Intergenic Intergenic 6010 NM_001320244 128218 Hs.104476 NM_144626 ENSG00000179178 TMEM125 - transmembrane protein 125 protein-coding chr12-6360 chr12 62268930 62269140 + 8.72 0.000 intron (NR_147080, intron 1 of 19) L1MB8|LINE|L1 8631 NM_001351161 9958 Hs.434951 NM_006313 ENSG00000135655 USP15 UNPH-2|UNPH4 ubiquitin specific peptidase 15 protein-coding chr3-6129 chr3 54897242 54897452 + 8.72 0.000 intron (NR_046666, intron 1 of 6) intron (NR_046666, intron 1 of 6) 3908 NR_046666 100874237 Hs.570583 NR_046666 ENSG00000243715 CACNA2D3-AS1 - CACNA2D3 antisense RNA 1 ncRNA chr14-5326 chr14 102226511 102226721 + 8.72 0.000 intron (NR_148556, intron 6 of 7) intron (NR_148556, intron 6 of 7) 8810 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr1-16642 chr1 240090377 240090587 + 8.72 0.000 Intergenic Intergenic -1401 NM_020066 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chrX-4459 chrX 56995447 56995657 + 8.72 0.000 promoter-TSS (NR_027139) promoter-TSS (NR_027139) -11 NM_001010862 169981 Hs.522672 NM_001010862 ENSG00000204271 SPIN3 SPIN-3|TDRD27|bA445O16.1 spindlin family member 3 protein-coding chr4-3002 chr4 123597761 123597971 + 8.72 0.000 Intergenic L2a|LINE|L2 -52125 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr17-5755 chr17 59951367 59951577 + 8.72 0.000 TTS (NM_003161) TTS (NM_003161) 13268 NM_016125 51136 Hs.531701 NM_016125 ENSG00000189050 RNFT1 PTD016 ring finger protein, transmembrane 1 protein-coding chrX-1368 chrX 150690254 150690464 + 8.72 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -2603 NM_001353994 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr5-2759 chr5 150241915 150242125 + 8.72 0.000 intron (NM_015981, intron 13 of 18) intron (NM_015981, intron 13 of 18) 47753 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chr9-3939 chr9 135803430 135803640 + 8.72 0.000 Intergenic MER104|DNA|TcMar-Tc2 101350 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr16-3732 chr16 9352082 9352292 + 8.72 0.000 Intergenic L1MA3|LINE|L1 -3401 NR_135195 101927009 Hs.537273 NR_135195 ENSG00000261617 LINC02177 - long intergenic non-protein coding RNA 2177 ncRNA chr17-5870 chr17 68328698 68328908 + 8.72 0.000 intron (NM_001352899, intron 2 of 12) intron (NM_001352899, intron 2 of 12) 36668 NM_001352901 22901 Hs.437249 NM_014960 ENSG00000141337 ARSG USH4 arylsulfatase G protein-coding chr20-2671 chr20 45157687 45157897 + 8.72 0.000 Intergenic L1M3de|LINE|L1 -17110 NM_002638 5266 Hs.112341 NM_002638 ENSG00000124102 PI3 ESI|SKALP|WAP3|WFDC14|cementoin peptidase inhibitor 3 protein-coding chr2-11079 chr2 122230976 122231186 + 8.72 0.000 Intergenic MIRc|SINE|MIR 475430 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr2-6275 chr2 48608330 48608540 + 8.72 0.000 intron (NM_172311, intron 3 of 10) AluSx1|SINE|Alu -9345 NM_001193487 11036 Hs.732016 NM_006872 ENSG00000242441 GTF2A1L ALF general transcription factor IIA subunit 1 like protein-coding chr3-2192 chr3 8607660 8607870 + 8.72 0.000 Intergenic Intergenic 35983 NR_024065 29931 Hs.433151 NM_013343 LINC00312 ERR-10|ERR10|LMCD1DN|LOH3CR2A|NAG-7|NAG7|NCRNA00312 long intergenic non-protein coding RNA 312 ncRNA chr10-6221 chr10 48729913 48730123 + 8.72 0.000 intron (NM_020945, intron 8 of 61) intron (NM_020945, intron 8 of 61) 44555 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr10-7681 chr10 28798060 28798270 + 8.72 0.000 intron (NR_120652, intron 2 of 3) intron (NR_120652, intron 2 of 3) -2115 NR_038374 100507605 Hs.119207 NR_038374 ENSG00000235824 LINC00837 - long intergenic non-protein coding RNA 837 ncRNA chr15-4845 chr15 74061029 74061239 + 8.72 0.000 Intergenic MER63B|DNA|hAT-Blackjack 21416 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr2-5247 chr2 51387333 51387543 + 8.72 0.000 intron (NR_135237, intron 4 of 10) L2a|LINE|L2 354837 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr3-2284 chr3 86344522 86344732 + 8.72 0.000 Intergenic AluSz|SINE|Alu -137316 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr7-1516 chr7 30348097 30348307 + 8.72 0.000 intron (NM_147128, intron 2 of 4) intron (NM_147128, intron 2 of 4) -21848 NR_002186 222161 Hs.112423 NR_002186 DKFZP586I1420 - uncharacterized protein DKFZp586I1420 pseudo chrX-1846 chrX 109740186 109740396 + 8.72 0.000 Intergenic Intergenic -6899 NM_022977 2182 Hs.268785 NM_004458 ENSG00000068366 ACSL4 ACS4|FACL4|LACS4|MRX63|MRX68 acyl-CoA synthetase long chain family member 4 protein-coding chr1-8964 chr1 9435129 9435339 + 8.72 0.000 Intergenic CR1-3_Croc|LINE|CR1 -6238 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr10-6912 chr10 47231689 47231899 + 8.72 0.000 Intergenic (ATT)n|Simple_repeat|Simple_repeat -68403 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr16-6546 chr16 64339125 64339335 + 8.72 0.000 Intergenic MER1A|DNA|hAT-Charlie 782833 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr9-7799 chr9 80232761 80232971 + 8.72 0.000 Intergenic L1PA16|LINE|L1 257843 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr17-6636 chr17 65179380 65179590 + 8.72 0.000 intron (NM_003835, intron 9 of 18) intron (NM_003835, intron 9 of 18) 42115 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr9-2044 chr9 4662233 4662443 + 8.72 0.000 promoter-TSS (NM_001353487) promoter-TSS (NM_001353487) 44 NM_203453 403313 Hs.107510 NM_203453 ENSG00000205808 PLPP6 PDP1|PPAPDC2|PSDP|bA6J24.6 phospholipid phosphatase 6 protein-coding chr3-5822 chr3 30845127 30845337 + 8.72 0.000 intron (NM_207359, intron 6 of 14) intron (NM_207359, intron 6 of 14) 49429 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr1-6733 chr1 65266108 65266318 + 8.72 0.000 intron (NM_014787, intron 1 of 18) intron (NM_014787, intron 1 of 18) 1464 NM_014787 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr1-6419 chr1 15304573 15304783 + 8.72 0.000 intron (NM_052929, intron 6 of 30) intron (NM_052929, intron 6 of 30) 39205 NR_148918 101927417 Hs.715313 NR_148918 ENSG00000233485 LOC101927417 - uncharacterized LOC101927417 ncRNA chr10-5284 chr10 69216995 69217205 + 8.72 0.000 intron (NR_120648, intron 4 of 4) intron (NR_120648, intron 4 of 4) -3232 NM_025130 80201 Hs.522988 NM_025130 ENSG00000156510 HKDC1 - hexokinase domain containing 1 protein-coding chr12-4433 chr12 9919030 9919240 + 8.72 0.000 intron (NM_207375, intron 3 of 4) L1PA12|LINE|L1 13235 NM_207375 387836 Hs.527665 NM_207375 ENSG00000188393 CLEC2A INPE5792|KACL|PILAR|UNQ5792 C-type lectin domain family 2 member A protein-coding chr7-5227 chr7 15561986 15562196 + 8.72 0.000 promoter-TSS (NM_001004320) promoter-TSS (NM_001004320) -76 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chrX-3801 chrX 139454735 139454945 + 8.72 0.000 Intergenic Intergenic 8021 NR_028597 6719 Hs.730315 NR_028597 SRD5A1P1 SRD5AP1 steroid 5 alpha-reductase 1 pseudogene 1 pseudo chr4-4511 chr4 62057025 62057235 + 8.72 0.000 intron (NM_001371343, intron 23 of 23) intron (NM_001371343, intron 23 of 23) 104635 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr11-3995 chr11 3393494 3393704 + 8.72 0.000 intron (NR_024248, intron 3 of 10) AluSx3|SINE|Alu -1684 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr15-1716 chr15 89530124 89530334 + 8.72 0.000 Intergenic Intergenic -6195 NR_027077 283761 Hs.459288 NR_027074 LINC00928 - long intergenic non-protein coding RNA 928 ncRNA chr18-2161 chr18 57861542 57861752 + 8.72 0.000 Intergenic AluSc8|SINE|Alu -58332 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr1-15731 chr1 170987754 170987964 + 8.72 0.000 intron (NM_001163629, intron 10 of 21) MER45B|DNA|hAT-Tip100 52325 NM_025063 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding chr14-4352 chr14 23572998 23573208 + 8.72 0.000 intron (NM_001146028, intron 3 of 5) intron (NM_001146028, intron 3 of 5) -5312 NM_001282475 8906 Hs.343244 NM_003917 ENSG00000213983 AP1G2 G2AD adaptor related protein complex 1 subunit gamma 2 protein-coding chr19-5104 chr19 55895781 55895991 + 8.72 0.000 TTS (NM_176810) TTS (NM_176810) 36450 NM_176810 126204 Hs.446924 NM_176810 ENSG00000173572 NLRP13 CLR19.7|NALP13|NOD14|PAN13 NLR family pyrin domain containing 13 protein-coding chr4-2192 chr4 121139496 121139706 + 8.72 0.000 intron (NM_024873, intron 9 of 10) intron (NM_024873, intron 9 of 10) 24720 NM_024873 79931 Hs.208206 NM_024873 ENSG00000050730 TNIP3 ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding chr15-1209 chr15 52291075 52291285 + 8.72 0.000 intron (NM_018728, intron 1 of 40) L3|LINE|CR1 4624 NM_018728 55930 Hs.487036 NM_018728 ENSG00000128833 MYO5C - myosin VC protein-coding chr7-4488 chr7 147868597 147868807 + 8.72 0.000 intron (NM_014141, intron 12 of 22) L1PA6|LINE|L1 197023 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr10-4814 chr10 10778933 10779143 + 8.72 0.000 intron (NM_001326317, intron 2 of 14) intron (NM_001326317, intron 2 of 14) 15876 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo chr6-2724 chr6 55883342 55883552 + 8.72 0.000 Intergenic L3|LINE|CR1 -7857 NM_021073 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr15-3934 chr15 38995901 38996111 + 8.72 0.000 Intergenic Intergenic -254663 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr6-6952 chr6 16949736 16949946 + 8.72 0.000 Intergenic Intergenic -152417 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr10-6647 chr10 101875129 101875339 + 8.72 0.000 intron (NM_024541, intron 24 of 25) intron (NM_024541, intron 24 of 25) -31314 NM_173192 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr6-3953 chr6 92157130 92157340 + 8.72 0.000 Intergenic Intergenic -466807 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr4-3639 chr4 16401321 16401531 + 8.72 0.000 Intergenic Intergenic 174763 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr10-7922 chr10 51075951 51076161 + 8.72 0.000 intron (NM_006258, intron 1 of 17) intron (NM_006258, intron 1 of 17) 1569 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr16-3240 chr16 86231277 86231487 + 8.72 0.000 intron (NR_104139, intron 3 of 5) L1ME3A|LINE|L1 35201 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chrX-2643 chrX 111508114 111508324 + 8.72 0.000 Intergenic L2c|LINE|L2 -3426 NM_001354473 401613 Hs.98581 NM_001354473 ENSG00000260802 SERTM2 DKFZp686D0853|LINC00890 serine rich and transmembrane domain containing 2 protein-coding chr15-4890 chr15 76340044 76340254 + 8.72 0.000 intron (NM_145805, intron 3 of 5) CpG-8458 3376 NM_145805 64843 Hs.444677 NM_145805 ENSG00000159556 ISL2 - ISL LIM homeobox 2 protein-coding chrX-2512 chrX 95155403 95155613 + 8.72 0.000 Intergenic L1PA13|LINE|L1 -92282 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr11-8152 chr11 59706201 59706411 + 8.72 0.000 Intergenic 7SK|RNA|RNA 7539 NM_001005324 390201 Hs.589001 NM_001005324 ENSG00000172289 OR10V1 OR11-256 olfactory receptor family 10 subfamily V member 1 protein-coding chr11-5725 chr11 2336521 2336731 + 8.72 0.000 intron (NR_108080, intron 1 of 2) HERVIP10FH-int|LTR|ERV1 -33486 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr2-7982 chr2 65539982 65540192 + 8.72 0.000 Intergenic Intergenic -107488 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr10-6047 chr10 127789335 127789545 + 8.72 0.000 Intergenic L1M5|LINE|L1 52255 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr10-5818 chr10 110369860 110370070 + 8.72 0.000 Intergenic Intergenic -65045 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr17-5006 chr17 82390382 82390592 + 8.72 0.000 non-coding (NR_033265, exon 10 of 10) non-coding (NR_033265, exon 10 of 10) 16210 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr8-3188 chr8 107857563 107857773 + 8.72 0.000 Intergenic Intergenic 224271 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr12-3829 chr12 82299608 82299818 + 8.72 0.000 Intergenic Intergenic 58674 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr15-1718 chr15 90451494 90451704 + 8.72 0.000 intron (NM_003870, intron 11 of 37) MSTB2|LTR|ERVL-MaLR 63357 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr8-6485 chr8 63147063 63147273 + 8.72 0.000 Intergenic MER48|LTR|ERV1 21274 NR_102684 101410533 Hs.163027 NR_102684 ENSG00000270673 YTHDF3-AS1 - YTHDF3 antisense RNA 1 (head to head) ncRNA chr3-2891 chr3 48679931 48680141 + 8.72 0.000 intron (NM_016453, intron 6 of 12) intron (NM_016453, intron 6 of 12) 5879 NM_016453 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr4-2018 chr4 2702470 2702680 + 8.72 0.000 intron (NM_001256668, intron 17 of 19) L1MC4|LINE|L1 53761 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr3-8367 chr3 84680093 84680303 + 8.72 0.000 intron (NR_033860, intron 16 of 20) MIR|SINE|MIR 189377 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr4-7414 chr4 65488030 65488240 + 8.72 0.000 intron (NM_001281767, intron 5 of 16) intron (NM_001281767, intron 5 of 16) 181353 NM_001318761 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr2-13236 chr2 124868772 124868982 + 8.72 0.000 intron (NM_130773, intron 20 of 23) intron (NM_130773, intron 20 of 23) 843590 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr18-3384 chr18 59546278 59546488 + 8.72 0.000 intron (NM_133459, intron 2 of 10) MLT1H2|LTR|ERVL-MaLR 151040 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr5-5247 chr5 119389399 119389609 + 8.72 0.000 intron (NM_014350, intron 1 of 1) L2a|LINE|L2 33485 NM_014350 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr8-5345 chr8 15984958 15985168 + 8.72 0.000 Intergenic Intergenic 201209 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr22-2521 chr22 24284799 24285009 + 8.72 0.000 intron (NM_015330, intron 2 of 16) intron (NM_015330, intron 2 of 16) 14073 NM_015330 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr3-4709 chr3 56328277 56328487 + 8.72 0.000 intron (NR_132749, intron 2 of 17) intron (NR_132749, intron 2 of 17) 140085 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr6-3652 chr6 138431692 138431902 + 8.72 0.000 exon (NM_001144060, exon 6 of 8) exon (NM_001144060, exon 6 of 8) 3497 NR_036099 100423001 NR_036099 ENSG00000266555 MIR3145 mir-3145 microRNA 3145 ncRNA chr1-13322 chr1 240947565 240947775 + 8.72 0.000 intron (NM_001350116, intron 4 of 16) L2a|LINE|L2 -184602 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr18-1844 chr18 23283908 23284118 + 8.72 0.000 Intergenic MER41B|LTR|ERV1 128188 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr1-6534 chr1 27856622 27856832 + 8.72 0.000 Intergenic Intergenic -15816 NM_004848 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1|ICB1 thymocyte selection associated family member 2 protein-coding chr7-1861 chr7 6405523 6405733 + 8.72 0.000 Intergenic HAL1|LINE|L1 31101 NM_006908 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|MRD48|Rac-1|TC-25|p21-Rac1 Rac family small GTPase 1 protein-coding chr1-9630 chr1 46409844 46410054 + 8.72 0.000 intron (NM_001441, intron 9 of 14) intron (NM_001441, intron 9 of 14) 15632 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr8-4758 chr8 143228235 143228445 + 8.72 0.000 Intergenic Intergenic 15122 NM_001301772 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr17-3778 chr17 35454232 35454442 + 8.72 0.000 Intergenic HERVL-int|LTR|ERVL -5571 NM_144682 146857 Hs.462833 NM_144682 ENSG00000154760 SLFN13 SLFN10|hSLFN13 schlafen family member 13 protein-coding chr3-8472 chr3 124932485 124932695 + 8.72 0.000 intron (NM_033049, intron 1 of 11) AluSq2|SINE|Alu 2161 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr10-3142 chr10 68052533 68052743 + 8.72 0.000 intron (NM_001278185, intron 3 of 23) Looper|DNA|PiggyBac 22645 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr7-5285 chr7 23107183 23107393 + 8.72 0.000 intron (NM_018846, intron 1 of 10) intron (NM_018846, intron 1 of 10) 627 NM_018846 55975 Hs.654817 NM_018846 ENSG00000122550 KLHL7 CISS3|KLHL6|SBBI26 kelch like family member 7 protein-coding chr4-4259 chr4 20272546 20272756 + 8.72 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 20746 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr8-3520 chr8 117906102 117906312 + 8.72 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 14706 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr11-10150 chr11 91919814 91920024 + 8.72 0.000 Intergenic L1MB7|LINE|L1 -305115 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr3-7860 chr3 125057526 125057736 + 8.72 0.000 Intergenic Intergenic -1634 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr5-4594 chr5 30176330 30176540 + 8.72 0.000 Intergenic Intergenic 295875 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chr11-6669 chr11 76262108 76262318 + 8.72 0.000 Intergenic HERVL74-int|LTR|ERVL -55711 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr2-10989 chr2 99621525 99621735 + 8.72 0.000 intron (NM_001025108, intron 12 of 23) intron (NM_001025108, intron 12 of 23) -131613 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr22-921 chr22 37375309 37375519 + 8.72 0.000 exon (NM_052906, exon 3 of 3) exon (NM_052906, exon 3 of 3) -20575 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr18-784 chr18 38712432 38712642 + 8.72 0.000 Intergenic Intergenic 909638 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr10-8507 chr10 90701613 90701823 + 8.72 0.000 Intergenic ERVL-B4-int|LTR|ERVL 156321 NM_019860 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr5-5640 chr5 156141254 156141464 + 8.72 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -185398 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr1-9532 chr1 39505173 39505383 + 8.72 0.000 intron (NM_181809, intron 1 of 6) LTR5B|LTR|ERVK -9588 NR_132962 192217 Hs.472491 NR_132962 ENSG00000237624 OXCT2P1 OXCT2P 3-oxoacid CoA-transferase 2 pseudogene 1 pseudo chr5-4726 chr5 43574182 43574392 + 8.72 0.000 non-coding (NR_073113, exon 3 of 3) non-coding (NR_073113, exon 3 of 3) -16868 NM_183323 10605 Hs.482038 NM_006451 ENSG00000172239 PAIP1 - poly(A) binding protein interacting protein 1 protein-coding chr4-1463 chr4 176792813 176793023 + 8.72 0.000 promoter-TSS (NM_005429) promoter-TSS (NM_005429) 4 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr7-5787 chr7 78437392 78437602 + 8.72 0.000 intron (NM_001301128, intron 6 of 20) intron (NM_001301128, intron 6 of 20) 90255 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr5-3786 chr5 74140945 74141155 + 8.72 0.000 Intergenic Intergenic 167275 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr3-9733 chr3 67812738 67812948 + 8.72 0.000 intron (NR_109992, intron 3 of 6) MER5A|DNA|hAT-Charlie 158146 NR_109993 101927111 Hs.518057 NR_109992 ENSG00000241316 SUCLG2-AS1 - SUCLG2 antisense RNA 1 (head to head) ncRNA chr18-2053 chr18 47529028 47529238 + 8.72 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 148637 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr10-3846 chr10 6062360 6062570 + 8.72 0.000 promoter-TSS (NM_001308242) promoter-TSS (NM_001308242) -95 NM_000417 3559 Hs.231367 NM_000417 ENSG00000134460 IL2RA CD25|IDDM10|IL2R|IMD41|TCGFR|p55 interleukin 2 receptor subunit alpha protein-coding chr6-2332 chr6 116925421 116925631 + 8.72 0.000 exon (NM_173560, exon 16 of 19) exon (NM_173560, exon 16 of 19) 48284 NM_173560 222546 Hs.352276 NM_173560 ENSG00000185002 RFX6 MTCHRS|MTFS|RFXDC1|dJ955L16.1 regulatory factor X6 protein-coding chr6-8356 chr6 148615787 148615997 + 8.72 0.000 Intergenic Intergenic 106741 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr2-6359 chr2 102623552 102623762 + 8.72 0.000 intron (NM_003048, intron 1 of 11) intron (NM_003048, intron 1 of 11) 4104 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr6-5187 chr6 130671317 130671527 + 8.72 0.000 Intergenic Intergenic -155983 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr7-3367 chr7 100679956 100680166 + 8.72 0.000 TTS (NM_005273) TTS (NM_005273) 6321 NM_005273 2783 Hs.185172 NM_005273 ENSG00000172354 GNB2 - G protein subunit beta 2 protein-coding chr12-8303 chr12 128154960 128155170 + 8.72 0.000 Intergenic LTR33|LTR|ERVL 36848 NR_104648 101927694 Hs.524849 NR_104648 ENSG00000256659 LINC02368 - long intergenic non-protein coding RNA 2368 ncRNA chr16-4274 chr16 25109763 25109973 + 8.72 0.000 intron (NR_120306, intron 1 of 2) intron (NR_120306, intron 1 of 2) 1687 NR_120306 102723510 Hs.569596 NR_120306 LCMT1-AS1 - LCMT1 antisense RNA 1 ncRNA chr8-4127 chr8 73778289 73778499 + 8.72 0.000 Intergenic Intergenic -30686 NM_001164384 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr17-5712 chr17 56787092 56787302 + 8.72 0.000 Intergenic MER44C|DNA|TcMar-Tigger 46723 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr9-5663 chr9 122930610 122930820 + 8.72 0.000 intron (NM_001304363, intron 1 of 1) intron (NM_001304363, intron 1 of 1) 550 NM_001304364 57684 Hs.5638 NM_020924 ENSG00000171448 ZBTB26 ZNF481|bioref zinc finger and BTB domain containing 26 protein-coding chr6-4970 chr6 106339529 106339739 + 8.72 0.000 Intergenic L2c|LINE|L2 -13814 NM_001286111 9474 Hs.486063 NM_004849 ENSG00000057663 ATG5 APG5|APG5-LIKE|APG5L|ASP|SCAR25|hAPG5 autophagy related 5 protein-coding chr5-6725 chr5 72759639 72759849 + 8.72 0.000 Intergenic LTR104_Mam|LTR|Gypsy -56847 NM_002270 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chrX-2515 chrX 95625206 95625416 + 8.72 0.000 Intergenic MER39B|LTR|ERV1 -562085 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr5-5443 chr5 138157993 138158203 + 8.72 0.000 intron (NM_001164326, intron 19 of 19) MIRc|SINE|MIR -18670 NM_003551 8382 Hs.730856 NM_003551 ENSG00000112981 NME5 NM23-H5|NM23H5|RSPH23 NME/NM23 family member 5 protein-coding chr12-4618 chr12 40834530 40834740 + 8.72 0.000 intron (NM_001256064, intron 1 of 15) intron (NM_001256064, intron 1 of 15) 6697 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr17-5374 chr17 31321546 31321756 + 8.72 0.000 promoter-TSS (NM_014210) promoter-TSS (NM_014210) -29 NM_014210 2123 Hs.591198 NM_014210 ENSG00000126860 EVI2A EVDA|EVI-2A|EVI2 ecotropic viral integration site 2A protein-coding chr2-11232 chr2 166091236 166091446 + 8.72 0.000 intron (NR_110260, intron 1 of 11) intron (NR_110260, intron 1 of 11) 9810 NR_110260 101929680 Hs.662210 NR_110260 ENSG00000236107 SCN1A-AS1 - SCN1A and SCN9A antisense RNA 1 ncRNA chr4-5219 chr4 167933141 167933351 + 8.72 0.000 Intergenic Intergenic -159291 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr20-1251 chr20 37514163 37514373 + 8.72 0.000 Intergenic Intergenic 6035 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr16-3521 chr16 27432584 27432794 + 8.72 0.000 intron (NM_181079, intron 3 of 9) intron (NM_181079, intron 3 of 9) 5418 NM_021798 50615 Hs.210546 NM_021798 ENSG00000103522 IL21R CD360|IMD56|NILR interleukin 21 receptor protein-coding chr1-10521 chr1 168757345 168757555 + 8.72 0.000 Intergenic Intergenic -28244 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr16-5551 chr16 28999498 28999708 + 8.72 0.000 Intergenic LTR16C|LTR|ERVL 14551 NM_001014987 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr3-9510 chr3 51442879 51443089 + 8.72 0.000 intron (NR_146065, intron 6 of 25) L1PA11|LINE|L1 51699 NM_013286 29890 Hs.118738 NM_013286 ENSG00000259956 RBM15B HUMAGCGB|HsOTT3|OTT3 RNA binding motif protein 15B protein-coding chr19-6727 chr19 38072771 38072981 + 8.72 0.000 intron (NM_015073, intron 2 of 21) intron (NM_015073, intron 2 of 21) -90220 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr6-2038 chr6 69027924 69028134 + 8.72 0.000 intron (NM_001704, intron 13 of 31) L3b|LINE|CR1 392747 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr11-5209 chr11 13646986 13647196 + 8.72 0.000 Intergenic MER4B-int|LTR|ERV1 -21577 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding chrX-3772 chrX 131389202 131389412 + 8.72 0.000 Intergenic MIRb|SINE|MIR -99878 NM_001170961 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr3-10604 chr3 144344591 144344801 + 8.72 0.000 Intergenic LTR78|LTR|ERV1 371615 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr10-5020 chr10 33656269 33656479 + 8.72 0.000 Intergenic Intergenic 116306 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr1-14783 chr1 70271350 70271560 + 8.72 0.000 intron (NM_030816, intron 11 of 12) L1M7|LINE|L1 50075 NM_001350614 9295 Hs.479693 NM_004768 ENSG00000116754 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine and arginine rich splicing factor 11 protein-coding chr22-1978 chr22 19352611 19352821 + 8.72 0.000 intron (NM_003325, intron 23 of 24) intron (NM_003325, intron 23 of 24) -60997 NM_007098 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr7-2661 chr7 5284618 5284828 + 8.72 0.000 intron (NM_153247, intron 1 of 10) intron (NM_153247, intron 1 of 10) 1780 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr7-2551 chr7 91837711 91837921 + 8.72 0.000 Intergenic LTR41B|LTR|ERVL 42886 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr15-3023 chr15 57596755 57596965 + 8.72 0.000 intron (NM_001018100, intron 1 of 12) L2c|LINE|L2 4956 NR_104371 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr5-8069 chr5 94492825 94493035 + 8.72 0.000 intron (NM_001145678, intron 5 of 20) intron (NM_001145678, intron 5 of 20) 125674 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr15-2761 chr15 27133329 27133539 + 8.72 0.000 intron (NM_001270873, intron 3 of 5) intron (NM_001270873, intron 3 of 5) 27885 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr12-5426 chr12 122383233 122383443 + 8.72 0.000 intron (NM_198240, intron 1 of 23) intron (NM_198240, intron 1 of 23) -12204 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chrX-1195 chrX 68659461 68659671 + 8.72 0.000 intron (NM_014725, intron 1 of 13) intron (NM_014725, intron 1 of 13) 11897 NM_014725 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chrX-5429 chrX 153623657 153623867 + 8.72 0.000 Intergenic Intergenic -18679 NM_001395 1852 Hs.144879 NM_001395 ENSG00000130829 DUSP9 MKP-4|MKP4 dual specificity phosphatase 9 protein-coding chr20-2712 chr20 48286882 48287092 + 8.72 0.000 Intergenic Intergenic -72924 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr12-3640 chr12 97318798 97319008 + 8.72 0.000 Intergenic Intergenic -143873 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr13-1982 chr13 22653790 22654000 + 8.72 0.000 Intergenic Intergenic 244286 NR_033774 646201 Hs.729338 NR_033774 BASP1P1 - BASP1 pseudogene 1 pseudo chr18-1375 chr18 43893436 43893646 + 8.72 0.000 Intergenic Intergenic -616051 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr15-1729 chr15 38687194 38687404 + 8.72 0.000 Intergenic MER34A1|LTR|ERV1 -9299 NR_160786 chr5-4186 chr5 110066218 110066428 + 8.72 0.000 Intergenic Intergenic 183141 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr2-7429 chr2 10510777 10510987 + 8.72 0.000 Intergenic L1MB7|LINE|L1 61154 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chrX-2128 chrX 30734301 30734511 + 8.72 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 81047 NM_203391 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr4-4843 chr4 109911033 109911243 + 8.72 0.000 Intergenic Intergenic -1745 NM_001963 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr21-1223 chr21 45407782 45407992 + 8.72 0.000 intron (NR_052004, intron 3 of 3) intron (NR_052004, intron 3 of 3) 2178 NR_052004 100874236 Hs.589901 NR_052004 ENSG00000224574 COL18A1-AS2 - COL18A1 antisense RNA 2 ncRNA chr6-4494 chr6 36949722 36949932 + 8.72 0.000 intron (NM_001199159, intron 1 of 7) L1MEd|LINE|L1 1564 NM_001199159 221476 Hs.25391 NM_153370 ENSG00000164530 PI16 CD364|CRISP9|MSMBBP|PSPBP peptidase inhibitor 16 protein-coding chr10-3360 chr10 15563277 15563487 + 8.72 0.000 intron (NM_001291494, intron 24 of 28) intron (NM_001291494, intron 24 of 28) 156540 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr5-6629 chr5 41921825 41922035 + 8.72 0.000 TTS (NM_175921) TTS (NM_175921) -3322 NM_001297437 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding chr10-2410 chr10 127745027 127745237 + 8.72 0.000 Intergenic Intergenic 7947 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr1-9662 chr1 48098473 48098683 + 8.72 0.000 Intergenic L2b|LINE|L2 83850 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo chr3-9500 chr3 50908111 50908321 + 8.72 0.000 intron (NM_004947, intron 4 of 52) L1PA11|LINE|L1 233136 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr11-5189 chr11 10292961 10293171 + 8.72 0.000 intron (NM_030962, intron 1 of 39) intron (NM_030962, intron 1 of 39) 1141 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr10-3776 chr10 125339942 125340152 + 8.72 0.000 Intergenic L1PB1|LINE|L1 -179017 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr17-6557 chr17 42224237 42224447 + 8.72 0.000 intron (NM_012448, intron 4 of 18) intron (NM_012448, intron 4 of 18) -29848 NM_032484 84514 Hs.38039 NM_032484 ENSG00000167925 GHDC D11LGP1|LGP1 GH3 domain containing protein-coding chr10-8095 chr10 68756408 68756618 + 8.72 0.000 intron (NM_018237, intron 14 of 24) intron (NM_018237, intron 14 of 24) 1341 NR_003076 692211 NR_003076 ENSG00000283551 SNORD98 HBII-419 small nucleolar RNA, C/D box 98 snoRNA chr19-2543 chr19 44072570 44072780 + 8.72 0.000 intron (NM_001037813, intron 1 of 4) intron (NM_001037813, intron 1 of 4) 516 NM_001037813 342909 Hs.445395 NM_001037813 ENSG00000186026 ZNF284 ZNF284L zinc finger protein 284 protein-coding chr20-2311 chr20 6873188 6873398 + 8.72 0.000 Intergenic Intergenic 105607 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr15-4301 chr15 38740351 38740561 + 8.72 0.000 Intergenic Intergenic 43858 NR_160786 chr7-8269 chr7 38032080 38032290 + 8.72 0.000 Intergenic Intergenic 110866 NM_001242948 54749 Hs.563491 NM_017549 ENSG00000086289 EPDR1 EPDR|MERP-1|MERP1|UCC1 ependymin related 1 protein-coding chr16-6390 chr16 53623257 53623467 + 8.72 0.000 intron (NM_001330538, intron 21 of 25) intron (NM_001330538, intron 21 of 25) 80497 NM_001328422 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding chr2-4779 chr2 32865637 32865847 + 8.72 0.000 intron (NR_027098, intron 2 of 5) intron (NR_027098, intron 2 of 5) 40309 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr2-7154 chr2 200377852 200378062 + 8.72 0.000 intron (NM_001282743, intron 2 of 11) intron (NM_001282743, intron 2 of 11) 69007 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr2-4451 chr2 212179166 212179376 + 8.72 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 247089 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr3-9637 chr3 59902995 59903205 + 8.72 0.000 intron (NR_135491, intron 5 of 6) L1MA9|LINE|L1 177809 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr8-3906 chr8 40692216 40692426 + 8.72 0.000 intron (NM_024645, intron 4 of 6) intron (NM_024645, intron 4 of 6) 205505 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr11-10457 chr11 117489575 117489785 + 8.72 0.000 intron (NM_020693, intron 11 of 32) intron (NM_020693, intron 11 of 32) 161826 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr20-2052 chr20 7928188 7928398 + 8.72 0.000 intron (NM_017545, intron 2 of 7) intron (NM_017545, intron 2 of 7) 12165 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr5-5138 chr5 104540696 104540906 + 8.72 0.000 Intergenic Intergenic -558673 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr1-14981 chr1 89855453 89855663 + 8.72 0.000 intron (NM_001134479, intron 2 of 2) intron (NM_001134479, intron 2 of 2) 33619 NM_018103 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 VRAC subunit D protein-coding chrX-5395 chrX 151977087 151977297 + 8.72 0.000 Intergenic Intergenic -2516 NM_004961 2564 Hs.22785 NM_004961 ENSG00000102287 GABRE - gamma-aminobutyric acid type A receptor epsilon subunit protein-coding chr14-3203 chr14 73270931 73271141 + 8.72 0.000 intron (NM_001365907, intron 25 of 25) MIR|SINE|MIR -25035 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr18-1040 chr18 3602813 3603023 + 8.72 0.000 promoter-TSS (NR_119377) promoter-TSS (NR_119377) -819 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr9-3165 chr9 116450588 116450798 + 8.72 0.000 intron (NM_014010, intron 19 of 21) intron (NM_014010, intron 19 of 21) -50087 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr7-7303 chr7 42947909 42948119 + 8.72 0.000 Intergenic LTR24C|LTR|ERV1 15638 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr8-3842 chr8 31130144 31130354 + 8.72 0.000 intron (NM_000553, intron 23 of 34) intron (NM_000553, intron 23 of 34) -96893 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr7-5596 chr7 50192394 50192604 + 8.72 0.000 Intergenic MamGypLTR3a|LTR|Gypsy 96413 NM_001161834 100130988 Hs.99248 NM_001161834 ENSG00000164500 SPATA48 C7orf72 spermatogenesis associated 48 protein-coding chr2-14059 chr2 196758862 196759072 + 8.72 0.000 Intergenic Intergenic 40716 NM_012086 9330 Hs.470996 NM_012086 ENSG00000119041 GTF3C3 TFIIIC102|TFIIICgamma|TFiiiC2-102 general transcription factor IIIC subunit 3 protein-coding chr11-5006 chr11 75174857 75175067 + 8.72 0.000 intron (NM_007256, intron 7 of 13) intron (NM_007256, intron 7 of 13) 15130 NM_001145211 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr9-4904 chr9 7320343 7320553 + 8.72 0.000 Intergenic Intergenic 479330 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr19-1610 chr19 40403507 40403717 + 8.72 0.000 intron (NM_020956, intron 5 of 5) CpG 9752 NM_020956 57716 Hs.205457 NM_020956 ENSG00000105227 PRX CMT4F periaxin protein-coding chr16-3886 chr16 74747557 74747767 + 8.72 0.000 intron (NM_024306, intron 1 of 6) MLT1C|LTR|ERVL-MaLR 27158 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr7-9151 chr7 111981956 111982166 + 8.72 0.000 intron (NM_001363540, intron 7 of 52) MLT1J|LTR|ERVL-MaLR 173556 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr20-3969 chr20 34761599 34761809 + 8.72 0.000 intron (NM_001242539, intron 3 of 11) AluSg|SINE|Alu 20700 NM_001242539 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding chr4-8038 chr4 119825455 119825665 + 8.72 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -21045 NR_110660 101927007 Hs.143958 NR_110660 ENSG00000250772 LINC01365 - long intergenic non-protein coding RNA 1365 ncRNA chr4-1902 chr4 24473435 24473645 + 8.72 0.000 promoter-TSS (NR_148981) promoter-TSS (NR_148981) -635 NM_001354826 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr7-5614 chr7 52277547 52277757 + 8.72 0.000 Intergenic Intergenic -757981 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr16-5064 chr16 72859006 72859216 + 8.72 0.000 intron (NM_001164766, intron 3 of 8) intron (NM_001164766, intron 3 of 8) 189017 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr3-5591 chr3 8087550 8087760 + 8.72 0.000 Intergenic Intergenic -71348 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr10-3888 chr10 59593739 59593949 + 8.72 0.000 Intergenic L1M2|LINE|L1 116047 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr12-7090 chr12 44265276 44265486 + 8.72 0.000 intron (NM_001286213, intron 4 of 6) L2|LINE|L2 429300 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr15-5081 chr15 86775272 86775482 + 8.72 0.000 intron (NM_152336, intron 23 of 24) intron (NM_152336, intron 23 of 24) -157503 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr12-7701 chr12 90515901 90516111 + 8.72 0.000 Intergenic Intergenic 222688 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr6-4204 chr6 3726093 3726303 + 8.72 0.000 intron (NM_183373, intron 4 of 4) intron (NM_183373, intron 4 of 4) 25814 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr3-8845 chr3 9211058 9211268 + 8.72 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -5732 NR_103443 100288831 Hs.694646 NR_103443 ENSG00000227929 SRGAP3-AS3 - SRGAP3 antisense RNA 3 ncRNA chr2-2980 chr2 36506140 36506350 + 8.72 0.000 intron (NM_016441, intron 8 of 16) MER6|DNA|TcMar-Tigger 91923 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr14-2512 chr14 104380082 104380292 + 8.72 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 156603 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chrX-2117 chrX 27369797 27370007 + 8.72 0.000 Intergenic L1PB3|LINE|L1 93439 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr22-1800 chr22 32454410 32454620 + 8.72 0.000 intron (NM_174932, intron 1 of 14) intron (NM_174932, intron 1 of 14) 2871 NM_174932 254240 Hs.372939 NM_174932 ENSG00000184459 BPIFC BPIL2 BPI fold containing family C protein-coding chrX-4683 chrX 84244234 84244444 + 8.72 0.000 Intergenic Intergenic -18511 NR_031690 100302191 NR_031690 ENSG00000221494 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA chr18-2783 chr18 2569562 2569772 + 8.72 0.000 intron (NM_022840, intron 1 of 8) intron (NM_022840, intron 1 of 8) 1838 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr5-4137 chr5 86626065 86626275 + 8.72 0.000 Intergenic Intergenic 5664 NR_145802 109623460 NR_037402 SNORD138 MIR3607|mir-3607 small nucleolar RNA, C/D box 138 snoRNA chr7-5424 chr7 35915607 35915817 + 8.72 0.000 Intergenic Intergenic 114493 NM_001363715 989 Hs.191346 NM_001788 ENSG00000122545 SEPTIN7 CDC10|CDC3|NBLA02942|SEPT7|SEPT7A septin 7 protein-coding chr11-6971 chr11 115060057 115060267 + 8.72 0.000 Intergenic Intergenic -273415 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chrX-1209 chrX 71873643 71873853 + 8.72 0.000 Intergenic Intergenic -37340 NM_001013627 340527 Hs.397836 NM_001013627 ENSG00000204131 NHSL2 - NHS like 2 protein-coding chr17-4282 chr17 70793024 70793234 + 8.72 0.000 Intergenic MER21C|LTR|ERVL 409050 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr11-5166 chr11 3782430 3782640 + 8.72 0.000 intron (NR_157590, intron 1 of 31) intron (NR_157590, intron 1 of 31) 15011 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chr6-2301 chr6 105373986 105374196 + 8.72 0.000 intron (NM_002726, intron 4 of 14) intron (NM_002726, intron 4 of 14) 28991 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr4-4945 chr4 126521151 126521361 + 8.72 0.000 Intergenic Intergenic 1013997 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr1-7376 chr1 23977074 23977284 + 8.72 0.000 intron (NM_054016, intron 2 of 5) intron (NM_054016, intron 2 of 5) 3148 NM_001191007 10772 Hs.3530 NM_006625 ENSG00000188529 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine and arginine rich splicing factor 10 protein-coding chr1-5767 chr1 154221528 154221738 + 8.72 0.000 promoter-TSS (NM_001297721) promoter-TSS (NM_001297721) 678 NM_014847 9898 Hs.490551 NM_014847 ENSG00000143569 UBAP2L NICE-4|NICE4 ubiquitin associated protein 2 like protein-coding chr7-4626 chr7 27721832 27722042 + 8.72 0.000 Intergenic Intergenic -17436 NM_001206901 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr17-3675 chr17 11932720 11932930 + 8.72 0.000 intron (NM_001372, intron 64 of 68) intron (NM_001372, intron 64 of 68) 49923 NM_004662 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr5-3458 chr5 163223856 163224066 + 8.72 0.000 Intergenic LTR43B|LTR|ERV1 -213610 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr2-8702 chr2 152694354 152694564 + 8.72 0.000 intron (NM_001365601, intron 3 of 24) intron (NM_001365601, intron 3 of 24) 23002 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chrX-1984 chrX 11892467 11892677 + 8.72 0.000 intron (NM_001368398, intron 3 of 18) intron (NM_001368398, intron 3 of 18) 70133 NM_001368398 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr3-6505 chr3 113057453 113057663 + 8.72 0.000 Intergenic Intergenic -37887 NM_001319109 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr13-2626 chr13 77546770 77546980 + 8.72 0.000 intron (NM_003843, intron 1 of 31) intron (NM_003843, intron 1 of 31) 11169 NM_144777 8796 Hs.534699 NM_003843 ENSG00000136155 SCEL - sciellin protein-coding chr2-9032 chr2 198142737 198142947 + 8.72 0.000 intron (NM_006226, intron 5 of 5) intron (NM_006226, intron 5 of 5) 232255 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr20-3558 chr20 2796377 2796587 + 8.72 0.000 intron (NM_001184699, intron 8 of 13) intron (NM_001184699, intron 8 of 13) 4145 NM_019609 56265 Hs.659346 NM_019609 ENSG00000088882 CPXM1 CPX1|CPXM carboxypeptidase X, M14 family member 1 protein-coding chr3-10081 chr3 108964101 108964311 + 8.72 0.000 intron (NM_014429, intron 26 of 27) intron (NM_014429, intron 26 of 27) -10327 NM_005459 9626 Hs.233363 NM_005459 ENSG00000138472 GUCA1C GCAP3 guanylate cyclase activator 1C protein-coding chr2-9362 chr2 227939691 227939901 + 8.72 0.000 Intergenic MER90a|LTR|ERV1 68165 NM_178821 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr7-6586 chr7 81725064 81725274 + 8.72 0.000 intron (NM_001010932, intron 9 of 17) L2a|LINE|L2 -33763 NR_126025 100128317 Hs.571267 NR_126025 ENSG00000233491 LOC100128317 - uncharacterized LOC100128317 ncRNA chr2-7361 chr2 1929357 1929567 + 8.72 0.000 intron (NM_015025, intron 9 of 24) intron (NM_015025, intron 9 of 24) -184947 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr14-4097 chr14 67414630 67414840 + 8.72 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -2570 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr4-4550 chr4 72207069 72207279 + 8.72 0.000 Intergenic Intergenic 168042 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr1-14268 chr1 37053335 37053545 + 8.72 0.000 Intergenic Intergenic -18925 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr15-3978 chr15 47313741 47313951 + 8.72 0.000 intron (NM_001198999, intron 1 of 19) AluJr4|SINE|Alu 129757 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr2-6082 chr2 165550038 165550248 + 8.72 0.000 intron (NM_001172173, intron 3 of 6) intron (NM_001172173, intron 3 of 6) -22193 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr12-1895 chr12 65500495 65500705 + 8.72 0.000 intron (NR_120431, intron 2 of 3) intron (NR_120431, intron 2 of 3) 56711 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr7-6127 chr7 122802927 122803137 + 8.72 0.000 intron (NM_001167940, intron 1 of 29) intron (NM_001167940, intron 1 of 29) 83428 NM_001363390 93664 Hs.649459 NM_017954 ENSG00000081803 CADPS2 CAPS2 calcium dependent secretion activator 2 protein-coding chr11-9417 chr11 58821558 58821768 + 8.72 0.000 Intergenic L1PA5|LINE|L1 23041 NM_145016 219970 Hs.254271 NM_145016 ENSG00000156689 GLYATL2 BXMAS2-10|GATF-B glycine-N-acyltransferase like 2 protein-coding chr1-12290 chr1 232869309 232869519 + 8.72 0.000 Intergenic Intergenic 64522 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr5-6918 chr5 135090809 135091019 + 8.72 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -50867 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr4-4630 chr4 80045810 80046020 + 8.72 0.000 intron (NM_001286781, intron 7 of 16) intron (NM_001286781, intron 7 of 16) 27314 NM_058172 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF ANTXR cell adhesion molecule 2 protein-coding chr10-3427 chr10 36109568 36109778 + 8.72 0.000 Intergenic Intergenic 331371 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr4-3556 chr4 184125384 184125594 + 8.72 0.000 intron (NM_153343, intron 2 of 7) intron (NM_153343, intron 2 of 7) 92384 NM_153343 133121 Hs.297814 NM_153343 ENSG00000164303 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding chr12-6013 chr12 106236570 106236780 + 8.72 0.000 Intergenic Intergenic 11345 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr11-6645 chr11 75392130 75392340 + 8.72 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -7256 NM_001260507 6188 Hs.546286 NM_001005 ENSG00000149273 RPS3 S3 ribosomal protein S3 protein-coding chr11-3281 chr11 81807264 81807474 + 8.72 0.000 Intergenic HERVH-int|LTR|ERV1 83467 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr3-5748 chr3 20734934 20735144 + 8.72 0.000 Intergenic L2a|LINE|L2 392571 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr4-4201 chr4 14043978 14044188 + 8.72 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -67885 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr14-1896 chr14 100566180 100566390 + 8.72 0.000 intron (NM_001159531, intron 1 of 5) intron (NM_001159531, intron 1 of 5) 1785 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr20-3549 chr20 2386636 2386846 + 8.72 0.000 intron (NM_198994, intron 1 of 12) intron (NM_198994, intron 1 of 12) 5840 NM_198994 343641 Hs.452039 NM_198994 ENSG00000166948 TGM6 SCA35|TG6|TGM3L|TGY|dJ734P14.3 transglutaminase 6 protein-coding chr4-4987 chr4 135066054 135066264 + 8.72 0.000 Intergenic Intergenic 57400 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr3-6850 chr3 149564274 149564484 + 8.72 0.000 intron (NM_001348362, intron 6 of 9) intron (NM_001348362, intron 6 of 9) 89682 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr7-6355 chr7 149799575 149799785 + 8.72 0.000 intron (NR_163594, intron 46 of 102) MIR3|SINE|MIR 23638 NR_163594 23145 Hs.632022 NR_163594 ENSG00000197558 SSPO - SCO-spondin pseudo chr20-2361 chr20 16202109 16202319 + 8.72 0.000 Intergenic Intergenic -216332 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr3-8642 chr3 174366091 174366301 + 8.72 0.000 Intergenic Intergenic -445400 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr3-9712 chr3 66499900 66500110 + 8.72 0.000 intron (NM_015541, intron 1 of 18) CpG 416 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr13-1609 chr13 46172707 46172917 + 8.72 0.000 intron (NM_002298, intron 1 of 15) intron (NM_002298, intron 1 of 15) 9365 NM_002298 3936 Hs.381099 NM_002298 ENSG00000136167 LCP1 CP64|HEL-S-37|L-PLASTIN|LC64P|LPL|PLS2 lymphocyte cytosolic protein 1 protein-coding chr6-4659 chr6 51438027 51438237 + 8.72 0.000 Intergenic Intergenic -183738 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr10-4167 chr10 92467459 92467669 + 8.72 0.000 intron (NR_136399, intron 20 of 25) intron (NR_136399, intron 20 of 25) 30197 NM_001165946 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr7-8640 chr7 70540451 70540661 + 8.72 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -591588 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr2-7627 chr2 27027605 27027815 + 8.72 0.000 TTS (NM_001303050) TTS (NM_001303050) -5255 NM_017727 54867 Hs.533934 NM_017727 ENSG00000119777 TMEM214 - transmembrane protein 214 protein-coding chrX-2481 chrX 87253661 87253871 + 8.72 0.000 Intergenic L1PA7|LINE|L1 -264036 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chrX-932 chrX 35059953 35060163 + 8.72 0.000 Intergenic Intergenic 117262 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr8-7502 chr8 143194022 143194232 + 8.72 0.000 Intergenic AluJr|SINE|Alu -19091 NM_178172 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr1-9229 chr1 22883540 22883750 + 8.72 0.000 intron (NM_004442, intron 6 of 15) intron (NM_004442, intron 6 of 15) -20419 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr3-5849 chr3 33006941 33007151 + 8.72 0.000 intron (NM_001079811, intron 15 of 15) intron (NM_001079811, intron 15 of 15) 55402 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr1-8518 chr1 155073093 155073303 + 8.72 0.000 Intergenic L2c|LINE|L2 -5639 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr10-5317 chr10 70962356 70962566 + 8.72 0.000 Intergenic Intergenic 23408 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr1-8479 chr1 118290288 118290498 + 8.72 0.000 Intergenic Intergenic -105165 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr2-6712 chr2 26887597 26887807 + 8.72 0.000 intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 39278 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr1-11731 chr1 14709985 14710195 + 8.72 0.000 intron (NM_201628, intron 1 of 14) L2a|LINE|L2 111373 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr4-4718 chr4 89465195 89465405 + 8.72 0.000 Intergenic AluSc8|SINE|Alu -157500 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr14-2923 chr14 41202036 41202246 + 8.72 0.000 Intergenic MER87|LTR|ERV1 247430 NR_109758 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr1-14257 chr1 36804294 36804504 + 8.72 0.000 intron (NM_000831, intron 15 of 15) MER5B|DNA|hAT-Charlie 230116 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr2-9500 chr2 236634511 236634721 + 8.72 0.000 Intergenic Intergenic 64791 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr22-4084 chr22 43121582 43121792 + 8.72 0.000 intron (NM_001197, intron 1 of 4) intron (NM_001197, intron 1 of 4) 10937 NM_001197 638 Hs.475055 NM_001197 ENSG00000100290 BIK BIP1|BP4|NBK BCL2 interacting killer protein-coding chr11-10606 chr11 124301482 124301692 + 8.72 0.000 Intergenic Intergenic 9179 NM_001002917 283159 Hs.504211 NM_001002917 ENSG00000196341 OR8D1 JCG9|OR8D3|OST004|PDJ9J14 olfactory receptor family 8 subfamily D member 1 protein-coding chr11-4578 chr11 128514410 128514620 + 8.72 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 7795 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr3-1946 chr3 197627888 197628098 + 8.72 0.000 promoter-TSS (NR_003266) promoter-TSS (NR_003266) -112 NR_003266 220729 Hs.478854 NR_003266 ENSG00000214135 LOC220729 - succinate dehydrogenase complex flavoprotein subunit A pseudogene pseudo chr3-3764 chr3 9568646 9568856 + 8.72 0.000 Intergenic L1ME1|LINE|L1 -14929 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr4-8041 chr4 120402181 120402391 + 8.72 0.000 Intergenic LTR101_Mam|LTR|ERVL -335438 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr6-1922 chr6 42226386 42226596 + 8.72 0.000 3' UTR (NM_033502, exon 18 of 18) 3' UTR (NM_033502, exon 18 of 18) -8630 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr1-8150 chr1 14004990 14005200 + 8.72 0.000 Intergenic MSTC|LTR|ERVL-MaLR 255680 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr14-2854 chr14 30387470 30387680 + 8.72 0.000 Intergenic L2b|LINE|L2 -171548 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr7-4119 chr7 47683833 47684043 + 8.72 0.000 Intergenic Intergenic 28694 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr7-4791 chr7 82995650 82995860 + 8.72 0.000 intron (NM_033026, intron 3 of 24) MIR|SINE|MIR 167129 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr10-7764 chr10 34203363 34203573 + 8.72 0.000 intron (NM_001184789, intron 20 of 22) MER2|DNA|TcMar-Tigger -430788 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr14-1623 chr14 102949914 102950124 + 8.72 0.000 intron (NM_006035, intron 25 of 36) intron (NM_006035, intron 25 of 36) 27363 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chrX-3433 chrX 19801305 19801515 + 8.72 0.000 intron (NM_031892, intron 2 of 17) MLT1L|LTR|ERVL-MaLR -1637 NM_001024666 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr14-3490 chr14 102659942 102660152 + 8.72 0.000 intron (NM_015156, intron 2 of 11) MIRb|SINE|MIR 67398 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr19-5100 chr19 55526454 55526664 + 8.72 0.000 Intergenic Intergenic 10574 NM_001370096 646643 Hs.532676 NM_001101401 ENSG00000187550 SBK2 SGK069 SH3 domain binding kinase family member 2 protein-coding chr19-6925 chr19 46289361 46289571 + 8.72 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -7576 NM_152795 64344 Hs.420830 NM_022462 ENSG00000124440 HIF3A HIF-3A|HIF3-alpha-1|IPAS|MOP7|PASD7|bHLHe17 hypoxia inducible factor 3 subunit alpha protein-coding chr12-5390 chr12 120850028 120850238 + 8.72 0.000 intron (NM_139015, intron 1 of 10) intron (NM_139015, intron 1 of 10) 54225 NM_139015 121665 Hs.507087 NM_139015 ENSG00000157837 SPPL3 IMP2|MDHV1887|PRO4332|PSH1|PSL4 signal peptide peptidase like 3 protein-coding chr8-5125 chr8 68506149 68506359 + 8.72 0.000 intron (NR_146187, intron 4 of 13) L1MEd|LINE|L1 -174763 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr5-4659 chr5 36584883 36585093 + 8.72 0.000 Intergenic Intergenic -21367 NM_001289939 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr17-6873 chr17 28969819 28970029 + 8.72 0.000 exon (NM_178860, exon 4 of 17) exon (NM_178860, exon 4 of 17) -18406 NM_001290131 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr17-6477 chr17 19985334 19985544 + 8.72 0.000 Intergenic MER77B|LTR|ERVL -7583 NM_001330152 11216 Hs.642676 NM_007202 ENSG00000108599 AKAP10 AKAP-10|D-AKAP-2|D-AKAP2|PRKA10 A-kinase anchoring protein 10 protein-coding chr3-5015 chr3 27802122 27802332 + 8.72 0.000 intron (NR_146630, intron 1 of 4) intron (NR_146630, intron 1 of 4) 4639 NR_146630 105377007 NR_146630 LINC01980 - long intergenic non-protein coding RNA 1980 ncRNA chr15-2433 chr15 73614226 73614436 + 8.72 0.000 intron (NM_012428, intron 1 of 8) intron (NM_012428, intron 1 of 8) 19058 NM_017455 27020 Hs.744867 NM_012428 ENSG00000156642 NPTN GP55|GP65|SDFR1|SDR1|np55|np65 neuroplastin protein-coding chr14-3365 chr14 92124497 92124707 + 8.72 0.000 intron (NM_001322272, intron 1 of 15) intron (NM_001322272, intron 1 of 15) 2633 NM_001322270 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr3-6390 chr3 96411484 96411694 + 8.72 0.000 Intergenic THE1D|LTR|ERVL-MaLR 51625 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chr14-2276 chr14 36689458 36689668 + 8.72 0.000 intron (NM_001171170, intron 7 of 10) intron (NM_001171170, intron 7 of 10) 31995 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr5-8908 chr5 156905706 156905916 + 8.72 0.000 Intergenic L1MD3|LINE|L1 55516 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr2-11419 chr2 219708389 219708599 + 8.72 0.000 Intergenic Intergenic 80864 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr2-7513 chr2 20330739 20330949 + 8.72 0.000 intron (NM_001352920, intron 1 of 19) MER21B|LTR|ERVL -3458 NM_001282791 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr4-2651 chr4 184450158 184450368 + 8.72 0.000 intron (NM_002199, intron 1 of 8) MER46C|DNA|TcMar-Tigger 24287 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr1-16531 chr1 232098085 232098295 + 8.72 0.000 Intergenic L1MC1|LINE|L1 172356 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr2-7398 chr2 8422972 8423182 + 8.72 0.000 Intergenic Intergenic -94658 NR_152741 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr7-4542 chr7 2220436 2220646 + 8.72 0.000 intron (NM_001013837, intron 5 of 18) intron (NM_001013837, intron 5 of 18) 12404 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr15-1573 chr15 72807023 72807233 + 8.72 0.000 Intergenic SVA_D|Retroposon|SVA -23370 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chrX-2052 chrX 18583627 18583837 + 8.72 0.000 intron (NM_001037343, intron 8 of 21) intron (NM_001037343, intron 8 of 21) 88371 NM_000330 6247 Hs.715725 NM_000330 ENSG00000102104 RS1 RS|XLRS1 retinoschisin 1 protein-coding chr13-2347 chr13 35346047 35346257 + 8.72 0.000 intron (NM_015678, intron 36 of 57) intron (NM_015678, intron 36 of 57) 130537 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr10-3155 chr10 73355062 73355272 + 8.72 0.000 intron (NM_001367801, intron 1 of 27) MER1A|DNA|hAT-Charlie 3587 NM_001350934 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding chr2-7494 chr2 18119826 18120036 + 8.72 0.000 Intergenic L2c|LINE|L2 241264 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr2-7623 chr2 26871531 26871741 + 8.72 0.000 intron (NM_001253724, intron 1 of 12) AluSz|SINE|Alu 23212 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr6-8004 chr6 116935956 116936166 + 8.72 0.000 Intergenic Intergenic 58819 NM_173560 222546 Hs.352276 NM_173560 ENSG00000185002 RFX6 MTCHRS|MTFS|RFXDC1|dJ955L16.1 regulatory factor X6 protein-coding chr8-4665 chr8 137139602 137139812 + 8.72 0.000 Intergenic Intergenic 273881 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr2-11961 chr2 26738928 26739138 + 8.72 0.000 Intergenic Intergenic -25251 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr4-5050 chr4 142249103 142249313 + 8.72 0.000 intron (NM_001331040, intron 11 of 25) intron (NM_001331040, intron 11 of 25) 597327 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr13-1887 chr13 35994756 35994966 + 8.72 0.000 intron (NM_001330071, intron 3 of 16) intron (NM_001330071, intron 3 of 16) 136521 NM_001330071 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr5-3802 chr5 82717834 82718044 + 8.72 0.000 Intergenic MSTA|LTR|ERVL-MaLR -122216 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr22-980 chr22 29330539 29330749 + 8.72 0.000 exon (NM_145730, exon 19 of 21) exon (NM_145730, exon 19 of 21) 2614 NR_003686 100113380 NR_003686 ENSG00000239127 SNORD125 - small nucleolar RNA, C/D box 125 snoRNA chr10-6305 chr10 102549552 102549762 + 8.72 0.000 intron (NM_001178133, intron 2 of 10) intron (NM_001178133, intron 2 of 10) 45685 NM_001178133 51684 Hs.404089 NM_016169 ENSG00000107882 SUFU JBTS32|PRO1280|SUFUH|SUFUXL SUFU negative regulator of hedgehog signaling protein-coding chr5-5465 chr5 139119710 139119920 + 8.72 0.000 intron (NM_022464, intron 3 of 9) intron (NM_022464, intron 3 of 9) 78553 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr1-15050 chr1 94613380 94613590 + 8.72 0.000 Intergenic MER41A|LTR|ERV1 69783 NR_162147 113219466 NR_162147 MIR12133 - microRNA 12133 ncRNA chr12-7225 chr12 50731452 50731662 + 8.72 0.000 intron (NM_173602, intron 31 of 37) intron (NM_173602, intron 31 of 37) -32544 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr1-7870 chr1 107594670 107594880 + 8.72 0.000 intron (NM_006113, intron 25 of 26) intron (NM_006113, intron 25 of 26) 93724 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr1-14845 chr1 76508208 76508418 + 8.72 0.000 intron (NM_001349109, intron 3 of 3) MER1B|DNA|hAT-Charlie 270954 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chrX-1809 chrX 94236530 94236740 + 8.72 0.000 Intergenic AluSz|SINE|Alu 562429 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr10-5154 chr10 53120028 53120238 + 8.72 0.000 Intergenic Intergenic -348433 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr14-2888 chr14 35708000 35708210 + 8.72 0.000 intron (NM_001346245, intron 16 of 41) L1MA3|LINE|L1 54826 NR_135620 107399303 Hs.742611 NR_135620 SNORA101B ZL4 small nucleolar RNA, H/ACA box 101B snoRNA chr7-9311 chr7 128167483 128167693 + 8.72 0.000 Intergenic CpG -40284 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr2-3955 chr2 67290078 67290288 + 8.72 0.000 TTS (NR_110564) TTS (NR_110564) -74864 NR_038844 644838 Hs.145561 NR_038844 ENSG00000236780 LINC01829 - long intergenic non-protein coding RNA 1829 ncRNA chr10-3447 chr10 47348273 47348483 + 8.72 0.000 promoter-TSS (NM_002900) promoter-TSS (NM_002900) 15 NM_002900 5949 Hs.591928 NM_002900 ENSG00000265203 RBP3 D10S64|D10S65|D10S66|IRBP|RBPI|RP66 retinol binding protein 3 protein-coding chr16-4729 chr16 84056448 84056658 + 8.72 0.000 intron (NM_003791, intron 21 of 22) intron (NM_003791, intron 21 of 22) -14396 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr4-5727 chr4 43368816 43369026 + 8.72 0.000 Intergenic Intergenic 123622 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr8-4579 chr8 128514811 128515021 + 8.72 0.000 intron (NR_121672, intron 2 of 7) intron (NR_121672, intron 2 of 7) 49763 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr16-3189 chr16 84357487 84357697 + 8.72 0.000 Intergenic L1MD2|LINE|L1 -10931 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr7-6328 chr7 143375404 143375614 + 8.72 0.000 intron (NM_001371250, intron 1 of 6) intron (NM_001371250, intron 1 of 6) 5516 NR_161353 100507507 Hs.131743 NR_161353 LOC100507507 - uncharacterized LOC100507507 ncRNA chr20-4146 chr20 43968761 43968971 + 8.72 0.000 intron (NM_032883, intron 2 of 9) intron (NM_032883, intron 2 of 9) 22970 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr3-10676 chr3 150581391 150581601 + 8.72 0.000 intron (NM_001319043, intron 10 of 12) intron (NM_001319043, intron 10 of 12) -21825 NM_016275 51714 Hs.369052 NM_016275 ENSG00000198843 SELENOT SELT selenoprotein T protein-coding chr1-16691 chr1 245153561 245153771 + 8.72 0.000 Intergenic CpG -1319 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr17-3737 chr17 27930030 27930240 + 8.72 0.000 non-coding (NR_146896, exon 5 of 5) non-coding (NR_146896, exon 5 of 5) -36770 NM_001076680 201229 Hs.687951 NM_001076680 ENSG00000232859 LYRM9 C17orf108|HSD24 LYR motif containing 9 protein-coding chr7-9420 chr7 132608784 132608994 + 8.72 0.000 intron (NM_181775, intron 2 of 4) intron (NM_181775, intron 2 of 4) -32325 NM_020911 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr12-5298 chr12 111323819 111324029 + 8.72 0.000 intron (NM_015267, intron 18 of 21) AluJr|SINE|Alu 19782 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr21-657 chr21 38807045 38807255 + 8.72 0.000 intron (NM_001256295, intron 2 of 10) intron (NM_001256295, intron 2 of 10) 1221 NM_005239 2114 Hs.644231 NM_005239 ENSG00000157557 ETS2 ETS2IT1 ETS proto-oncogene 2, transcription factor protein-coding chrX-4671 chrX 82581235 82581445 + 8.72 0.000 Intergenic L1P3|LINE|L1 -926950 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr11-7187 chr11 130763745 130763955 + 8.72 0.000 Intergenic Intergenic 90894 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding chr14-1687 chr14 88983710 88983920 + 8.72 0.000 Intergenic Intergenic 159164 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr15-3273 chr15 77019384 77019594 + 8.72 0.000 intron (NR_135552, intron 3 of 11) intron (NR_135552, intron 3 of 11) 24363 NM_001321136 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chr4-2374 chr4 8642231 8642441 + 8.72 0.000 Intergenic LTR40c|LTR|ERVL 49571 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr15-3306 chr15 78748989 78749199 + 8.72 0.000 Intergenic MER5A|DNA|hAT-Charlie -2943 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr7-2853 chr7 106369573 106369783 + 8.72 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -84695 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr1-11663 chr1 1996369 1996579 + 8.72 0.000 intron (NM_001304360, intron 1 of 38) intron (NM_001304360, intron 1 of 38) 7312 NM_001304360 85452 Hs.232092 NM_001003808 ENSG00000142609 CFAP74 C1orf222|KIAA1751 cilia and flagella associated protein 74 protein-coding chr4-4267 chr4 22737593 22737803 + 8.72 0.000 intron (NR_102356, intron 2 of 2) intron (NR_102356, intron 2 of 2) 23609 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr20-4281 chr20 50039969 50040179 + 8.72 0.000 TTS (NR_051976) TTS (NR_051976) 1555 NR_051976 100887755 Hs.195705 NR_051976 TRERNA1 LINC00651|treRNA translation regulatory long non-coding RNA 1 ncRNA chr12-2440 chr12 52097939 52098149 + 8.72 0.000 intron (NR_120440, intron 1 of 1) SATR1|Satellite|Satellite 4475 NR_120440 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr2-4800 chr2 43762318 43762528 + 8.72 0.000 intron (NM_172069, intron 28 of 29) intron (NM_172069, intron 28 of 29) -11616 NM_016008 51626 Hs.371597 NM_015522 ENSG00000138036 DYNC2LI1 CGI-60|D2LIC|LIC3 dynein cytoplasmic 2 light intermediate chain 1 protein-coding chr12-4421 chr12 8265290 8265500 + 8.72 0.000 Intergenic LTR5A|LTR|ERVK -22449 NR_024254 653113 Hs.661749 NR_024254 FAM86FP - family with sequence similarity 86, member A pseudogene pseudo chr6-4256 chr6 8392009 8392219 + 8.72 0.000 Intergenic Intergenic 43431 NM_001370478 51000 Hs.285847 NM_015948 ENSG00000124786 SLC35B3 C6orf196|CGI-19|PAPST2 solute carrier family 35 member B3 protein-coding chrX-1362 chrX 149205176 149205386 + 8.72 0.000 Intergenic Intergenic 300025 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr17-5880 chr17 69638634 69638844 + 8.72 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 44752 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr7-2364 chr7 18829821 18830031 + 8.72 0.000 intron (NM_058176, intron 18 of 22) intron (NM_058176, intron 18 of 22) 287710 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr6-7882 chr6 107642484 107642694 + 8.72 0.000 intron (NM_018013, intron 6 of 6) intron (NM_018013, intron 6 of 6) 89561 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr9-4403 chr9 137397353 137397563 + 8.72 0.000 intron (NM_001286823, intron 1 of 7) L1M4a1|LINE|L1 25704 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr11-8055 chr11 26034558 26034768 + 8.72 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -154460 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr6-3567 chr6 56890711 56890921 + 8.72 0.000 intron (NM_001144769, intron 3 of 96) intron (NM_001144769, intron 3 of 96) -38900 NM_001144770 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr15-4300 chr15 38707911 38708121 + 8.72 0.000 Intergenic Intergenic 11418 NR_160786 chr5-4480 chr5 8563346 8563556 + 8.72 0.000 Intergenic AluSx4|SINE|Alu 102526 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr6-2712 chr6 45116611 45116821 + 8.72 0.000 intron (NM_001350325, intron 2 of 10) L1MB7|LINE|L1 81054 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chrX-3769 chrX 130805576 130805786 + 8.72 0.000 intron (NR_135655, intron 2 of 2) intron (NR_135655, intron 2 of 2) 3045 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr6-1696 chr6 17213465 17213675 + 8.72 0.000 Intergenic AluY|SINE|Alu -67791 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr11-5718 chr11 2185513 2185723 + 8.72 0.000 Intergenic Intergenic 12555 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr18-2002 chr18 41933912 41934122 + 8.72 0.000 Intergenic Intergenic -21217 NM_001308020 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr10-9258 chr10 133572834 133573044 + 8.72 0.000 Intergenic L1M5|LINE|L1 -2981 NR_033789 399833 Hs.660426 NM_001001678 SPRNP1 - shadow of prion protein pseudogene 1 pseudo chr5-5810 chr5 177039335 177039545 + 8.72 0.000 intron (NM_001308213, intron 2 of 8) intron (NM_001308213, intron 2 of 8) 16744 NM_001308221 23567 Hs.484259 NM_012279 ENSG00000113761 ZNF346 JAZ|Zfp346 zinc finger protein 346 protein-coding chr12-2936 chr12 79737733 79737943 + 8.72 0.000 Intergenic Intergenic -46741 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chrX-1797 chrX 85527501 85527711 + 8.72 0.000 Intergenic L1MA3|LINE|L1 -147941 NM_001307940 79983 Hs.267038 NM_024921 ENSG00000124429 POF1B POF|POF2B POF1B actin binding protein protein-coding chr6-2260 chr6 57313739 57313949 + 8.72 0.000 promoter-TSS (NM_001282488) promoter-TSS (NM_001282488) -961 NM_001282488 5558 Hs.654580 NM_000947 ENSG00000146143 PRIM2 PRIM2A|p58 DNA primase subunit 2 protein-coding chr2-6482 chr2 172113740 172113950 + 8.72 0.000 Intergenic Intergenic 10839 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr8-1028 chr8 28072877 28073087 + 8.72 0.000 intron (NM_001010906, intron 2 of 18) MamGypLTR3|LTR|Gypsy 10954 NM_001010906 389643 Hs.370129 NM_001010906 ENSG00000189233 NUGGC C8orf80|HMFN0672|SLIP-GC nuclear GTPase, germinal center associated protein-coding chr11-9704 chr11 67746543 67746753 + 8.72 0.000 Intergenic Intergenic 58688 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr3-10914 chr3 172413850 172414060 + 8.72 0.000 Intergenic Intergenic 34501 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr11-7685 chr11 66950368 66950578 + 8.72 0.000 intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) 7910 NM_000920 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding chr9-4983 chr9 20297881 20298091 + 8.72 0.000 Intergenic Intergenic 113252 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr13-2276 chr13 28322595 28322805 + 8.72 0.000 intron (NM_002019, intron 21 of 29) intron (NM_002019, intron 21 of 29) 172428 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr2-12352 chr2 50459579 50459789 + 8.72 0.000 intron (NM_001330093, intron 17 of 22) L1PREC2|LINE|L1 -111928 NM_138735 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr12-1946 chr12 108245265 108245475 + 8.72 0.000 intron (NM_001304447, intron 9 of 9) MIRb|SINE|MIR 75292 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr11-4316 chr11 69576838 69577048 + 8.72 0.000 Intergenic L1MD3|LINE|L1 -64162 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr3-9924 chr3 87610968 87611178 + 8.72 0.000 Intergenic HERVIP10F-int|LTR|ERV1 -181633 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr17-5588 chr17 47604646 47604856 + 8.72 0.000 intron (NM_001330257, intron 17 of 23) intron (NM_001330257, intron 17 of 23) -45168 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr20-3813 chr20 23569302 23569512 + 8.72 0.000 promoter-TSS (NM_080610) promoter-TSS (NM_080610) -923 NM_080610 128821 Hs.121554 NM_080610 ENSG00000101435 CST9L CTES7B|bA218C14.1 cystatin 9 like protein-coding chr3-9324 chr3 45132557 45132767 + 8.72 0.000 intron (NM_178181, intron 1 of 3) MIRb|SINE|MIR 13716 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr2-12471 chr2 60901792 60902002 + 8.72 0.000 intron (NM_002908, intron 4 of 10) intron (NM_002908, intron 4 of 10) 20323 NM_001291746 5966 Hs.631886 NM_002908 ENSG00000162924 REL C-Rel REL proto-oncogene, NF-kB subunit protein-coding chr13-2616 chr13 75705110 75705320 + 8.72 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) -55105 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr3-5238 chr3 100760577 100760787 + 8.72 0.000 intron (NM_001349332, intron 31 of 35) intron (NM_001349332, intron 31 of 35) 51140 NM_001195478 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr11-5832 chr11 8481397 8481607 + 8.72 0.000 intron (NM_001352388, intron 1 of 14) intron (NM_001352388, intron 1 of 14) 112474 NM_001289061 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr10-4608 chr10 114868535 114868745 + 8.72 0.000 intron (NM_001135051, intron 16 of 16) intron (NM_001135051, intron 16 of 16) 46860 NM_020940 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding chr12-5549 chr12 220271 220481 + 8.72 0.000 TTS (NM_016615) TTS (NM_016615) -6219 NM_001122848 6539 Hs.437174 NM_003044 ENSG00000111181 SLC6A12 BGT-1|BGT1|GAT2 solute carrier family 6 member 12 protein-coding chr3-10598 chr3 143708739 143708949 + 8.72 0.000 intron (NM_173653, intron 4 of 15) intron (NM_173653, intron 4 of 15) 139624 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr7-2989 chr7 22006865 22007075 + 8.72 0.000 Intergenic AluSc|SINE|Alu -61071 NM_001127370 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr2-10889 chr2 67126277 67126487 + 8.72 0.000 non-coding (NR_038844, exon 7 of 8) non-coding (NR_038844, exon 7 of 8) 39936 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA chr2-3893 chr2 44246326 44246536 + 8.72 0.000 Intergenic L3|LINE|CR1 -29049 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding chr13-3156 chr13 99662457 99662667 + 8.72 0.000 intron (NR_104592, intron 1 of 9) intron (NR_104592, intron 1 of 9) 19503 NR_036191 100422861 NR_036191 ENSG00000263615 MIR4306 mir-4306 microRNA 4306 ncRNA chr9-4624 chr9 110596810 110597020 + 8.72 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -17174 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr20-1187 chr20 3923734 3923944 + 8.72 0.000 non-coding (NR_136715, exon 7 of 7) non-coding (NR_136715, exon 7 of 7) -6276 NR_031722 100302282 NR_031722 ENSG00000283320 MIR103B2 MIR103-2-AS|MIR103-2AS|MIRN103-2AS|hsa-mir-103-2-as microRNA 103b-2 ncRNA chr9-7757 chr9 76373544 76373754 + 8.72 0.000 Intergenic Intergenic 20777 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr1-15977 chr1 193905995 193906205 + 8.72 0.000 Intergenic LTR52|LTR|ERVL 601355 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr20-1681 chr20 34600963 34601173 + 8.72 0.000 intron (NM_080476, intron 7 of 11) intron (NM_080476, intron 7 of 11) 42350 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr7-4620 chr7 25093336 25093546 + 8.72 0.000 Intergenic Intergenic 31920 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr11-7202 chr11 132832754 132832964 + 8.72 0.000 intron (NM_001319104, intron 1 of 6) Tigger3b|DNA|TcMar-Tigger 110778 NM_002545 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr9-5571 chr9 112034079 112034289 + 8.72 0.000 Intergenic Intergenic 102084 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr1-9448 chr1 34654863 34655073 + 8.72 0.000 Intergenic Intergenic 14726 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr16-6199 chr16 27629422 27629632 + 8.72 0.000 intron (NM_015202, intron 4 of 27) intron (NM_015202, intron 4 of 27) 79383 NM_015202 23247 Hs.460459 NM_015202 ENSG00000047578 KIAA0556 JBTS26 KIAA0556 protein-coding chr14-4541 chr14 42489154 42489364 + 8.72 0.000 Intergenic Intergenic 882403 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr4-3902 chr4 147078372 147078582 + 8.72 0.000 Intergenic Intergenic -132591 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr8-4204 chr8 85077008 85077218 + 8.72 0.000 Intergenic Intergenic -30125 NM_033402 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chr4-3881 chr4 140907289 140907499 + 8.72 0.000 intron (NM_020724, intron 6 of 6) intron (NM_020724, intron 6 of 6) -151009 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chrX-1143 chrX 37816422 37816632 + 8.72 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 31044 NM_006520 6990 Hs.446392 NM_006520 ENSG00000165169 DYNLT3 RP3|TCTE1L|TCTEX1L dynein light chain Tctex-type 3 protein-coding chr17-4760 chr17 43559602 43559812 + 8.72 0.000 Intergenic Intergenic -13367 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr20-2817 chr20 58207201 58207411 + 8.72 0.000 Intergenic Intergenic 21347 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr17-4777 chr17 44837336 44837546 + 8.72 0.000 Intergenic LTR8|LTR|ERV1 -6630 NM_001080383 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr20-3658 chr20 10671515 10671725 + 8.72 0.000 intron (NM_000214, intron 2 of 25) intron (NM_000214, intron 2 of 25) 2379 NM_000214 182 Hs.224012 NM_000214 ENSG00000101384 JAG1 AGS|AGS1|AHD|AWS|CD339|DCHE|HJ1|JAGL1 jagged canonical Notch ligand 1 protein-coding chr10-6853 chr10 26786662 26786872 + 8.72 0.000 intron (NM_001012752, intron 2 of 9) intron (NM_001012752, intron 2 of 9) 74320 NM_001178124 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr5-4311 chr5 152057148 152057358 + 8.72 0.000 intron (NR_109876, intron 1 of 2) MER5A1|DNA|hAT-Charlie 98355 NR_109876 101927115 Hs.549665 NR_109876 ENSG00000254226 LINC01933 CTB-12O2.1 long intergenic non-protein coding RNA 1933 ncRNA chr4-7992 chr4 114707138 114707348 + 8.72 0.000 Intergenic L2a|LINE|L2 50484 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chr1-15835 chr1 180164838 180165048 + 8.72 0.000 intron (NM_002826, intron 1 of 11) MSTB|LTR|ERVL-MaLR 10074 NM_002826 5768 Hs.719176 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr16-2002 chr16 1158539 1158749 + 8.72 0.000 intron (NM_001005407, intron 2 of 33) intron (NM_001005407, intron 2 of 33) 5403 NM_001005407 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr5-2060 chr5 132497009 132497219 + 8.72 0.000 Intergenic CpG -6341 NR_149069 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr5-8795 chr5 149412882 149413092 + 8.72 0.000 intron (NR_105060, intron 1 of 4) intron (NR_105060, intron 1 of 4) 6142 NR_105060 728264 Hs.519666 NR_027180 CARMN CARMEN|MIR143HG cardiac mesoderm enhancer-associated non-coding RNA ncRNA chr2-11233 chr2 166111284 166111494 + 8.72 0.000 intron (NR_110260, intron 2 of 11) Tigger1|DNA|TcMar-Tigger 16631 NR_148667 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr10-6497 chr10 52988170 52988380 + 8.72 0.000 Intergenic AluJb|SINE|Alu -216575 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr5-2052 chr5 122078055 122078265 + 8.72 0.000 promoter-TSS (NM_002317) promoter-TSS (NM_002317) 99 NM_002317 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr11-6432 chr11 66219922 66220132 + 8.72 0.000 intron (NM_018026, intron 8 of 23) intron (NM_018026, intron 8 of 23) -37267 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr3-7686 chr3 42928557 42928767 + 8.72 0.000 Intergenic Intergenic -7680 NM_001205272 100506243 Hs.720172 NM_015673 ENSG00000240747 KRBOX1 - KRAB box domain containing 1 protein-coding chr6-5160 chr6 126952700 126952910 + 8.72 0.000 Intergenic Intergenic -165866 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr20-1940 chr20 23297579 23297789 + 8.72 0.000 Intergenic Intergenic -53107 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding chr13-2533 chr13 61397100 61397310 + 8.72 0.000 Intergenic Intergenic 18317 NM_022843 64881 Hs.391781 NM_022843 ENSG00000280165 PCDH20 PCDH13 protocadherin 20 protein-coding chr2-14222 chr2 209835724 209835934 + 8.72 0.000 intron (NM_032504, intron 18 of 63) intron (NM_032504, intron 18 of 63) 63836 NM_032504 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr6-3372 chr6 40104074 40104284 + 8.72 0.000 Intergenic Intergenic -169717 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr9-6803 chr9 35457240 35457450 + 8.72 0.000 intron (NR_003581, intron 11 of 17) HERVIP10FH-int|LTR|ERV1 -32766 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr3-8446 chr3 119728667 119728877 + 8.72 0.000 intron (NM_033364, intron 7 of 17) L2c|LINE|L2 25750 NM_001320318 89876 Hs.341906 NM_033364 ENSG00000183833 MAATS1 AAT1|AAT1alpha|C3orf15|CFAP91|CaM-IP2|SPATA26 MYCBP associated and testis expressed 1 protein-coding chr4-7007 chr4 24092447 24092657 + 8.72 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) -202505 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr1-12543 chr1 26909461 26909671 + 8.72 0.000 Intergenic Intergenic 4409 NM_021969 8431 Hs.427055 NM_021969 ENSG00000131910 NR0B2 SHP|SHP1 nuclear receptor subfamily 0 group B member 2 protein-coding chr12-8261 chr12 124847064 124847274 + 8.72 0.000 intron (NR_160424, intron 1 of 11) intron (NR_160424, intron 1 of 11) -7498 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr3-3840 chr3 32201057 32201267 + 8.72 0.000 Intergenic Intergenic -37517 NM_001320308 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr7-1524 chr7 73337101 73337311 + 8.72 0.000 intron (NM_001281304, intron 4 of 7) intron (NM_001281304, intron 4 of 7) 9045 NM_001281304 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr2-3773 chr2 10033351 10033561 + 8.72 0.000 Intergenic Intergenic 9945 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr1-4960 chr1 53496208 53496418 + 8.72 0.000 Intergenic Intergenic 36914 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chrX-1091 chrX 6311236 6311446 + 8.72 0.000 Intergenic LTR8|LTR|ERV1 72622 NR_039927 100616373 NR_039927 ENSG00000265284 MIR4770 - microRNA 4770 ncRNA chr3-7006 chr3 170746191 170746401 + 8.72 0.000 intron (NR_135556, intron 5 of 5) LOR1a|LTR|ERV1 123899 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr11-5024 chr11 79690361 79690571 + 8.72 0.000 Intergenic Intergenic -249436 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr8-5887 chr8 15893553 15893763 + 8.72 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 292614 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr10-7467 chr10 9063340 9063550 + 8.72 0.000 Intergenic AluSc|SINE|Alu 165456 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LINC02676 - long intergenic non-protein coding RNA 2676 ncRNA chr1-6485 chr1 21885414 21885624 + 8.72 0.000 intron (NM_005529, intron 9 of 96) intron (NM_005529, intron 9 of 96) 51791 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr7-3181 chr7 101506571 101506781 + 8.72 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 62330 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr7-4773 chr7 77649898 77650108 + 8.72 0.000 Intergenic Intergenic 46262 NR_134251 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr3-7405 chr3 100776452 100776662 + 8.72 0.000 intron (NM_001349332, intron 27 of 35) intron (NM_001349332, intron 27 of 35) 67015 NM_001195478 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr18-2279 chr18 76028128 76028338 + 8.72 0.000 Intergenic Intergenic -94765 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA chr21-1818 chr21 39764547 39764757 + 8.72 0.000 intron (NM_001080444, intron 2 of 8) intron (NM_001080444, intron 2 of 8) 19245 NM_001080444 150084 Hs.422120 NM_001080444 ENSG00000183067 IGSF5 GSF5|JAM4 immunoglobulin superfamily member 5 protein-coding chr7-3657 chr7 44337871 44338081 + 8.72 0.000 Intergenic L1MEf|LINE|L1 -12345 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr4-4947 chr4 127369867 127370077 + 8.72 0.000 Intergenic L3|LINE|CR1 -262985 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr3-6659 chr3 129116186 129116396 + 8.72 0.000 intron (NM_001204890, intron 11 of 12) intron (NM_001204890, intron 11 of 12) 5513 NM_001204887 339122 Hs.381132 NM_198490 ENSG00000172780 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding chr7-7683 chr7 154931916 154932126 + 8.72 0.000 intron (NR_024476, intron 2 of 7) L1M4|LINE|L1 3504 NR_024477 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr8-1861 chr8 15361239 15361449 + 8.72 0.000 Intergenic ERVL-E-int|LTR|ERVL -122913 NM_139167 137868 Hs.545526 NM_139167 ENSG00000185053 SGCZ ZSG1 sarcoglycan zeta protein-coding chr17-8308 chr17 70917152 70917362 + 8.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 284922 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr3-9509 chr3 51374091 51374301 + 8.72 0.000 intron (NM_004947, intron 49 of 52) intron (NM_004947, intron 49 of 52) -11095 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr15-3162 chr15 68222131 68222341 + 8.72 0.000 intron (NM_017882, intron 1 of 6) SVA_A|Retroposon|SVA 7492 NM_017882 54982 Hs.584921 NM_017882 ENSG00000128973 CLN6 CLN4A|HsT18960|nclf CLN6 transmembrane ER protein protein-coding chr8-2308 chr8 141059216 141059426 + 8.72 0.000 Intergenic Intergenic -57242 NM_001352699 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr9-5768 chr9 127691920 127692130 + 8.72 0.000 3' UTR (NM_003165, exon 20 of 20) 3' UTR (NM_003165, exon 20 of 20) -1230 NR_037473 100500872 NR_037473 ENSG00000283874 MIR3911 mir-3911 microRNA 3911 ncRNA chr3-5781 chr3 24948892 24949102 + 8.72 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 119674 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr5-8496 chr5 133384538 133384748 + 8.72 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 43063 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr4-6765 chr4 6515686 6515896 + 8.72 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) 39824 NM_001206995 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr10-5957 chr10 122856732 122856942 + 8.72 0.000 intron (NM_152644, intron 1 of 3) intron (NM_152644, intron 1 of 3) -10980 NR_037912 50624 Hs.647182 NM_022034 ENSG00000138161 CUZD1 ERG-1|ERG1|ITMAP1|UO-44 CUB and zona pellucida like domains 1 protein-coding chr11-5892 chr11 12681347 12681557 + 8.72 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 7031 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr4-4581 chr4 75808338 75808548 + 8.72 0.000 intron (NM_003715, intron 20 of 23) L1M6B|LINE|L1 83921 NM_003715 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr8-2247 chr8 43073602 43073812 + 8.72 0.000 intron (NR_033698, intron 4 of 7) MER20|DNA|hAT-Charlie 17384 NM_002027 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr6-3579 chr6 69827472 69827682 + 8.72 0.000 Intergenic MIR3|SINE|MIR -30567 NM_018368 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr1-10282 chr1 148917110 148917320 + 8.72 0.000 intron (NM_001198832, intron 4 of 45) intron (NM_001198832, intron 4 of 45) -11926 NR_037182 653513 Hs.632434 NR_037182 LOC653513 - phosphodiesterase 4D interacting protein-like pseudo chr4-3803 chr4 110371559 110371769 + 8.72 0.000 Intergenic Intergenic -104491 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr13-3433 chr13 102318193 102318403 + 8.72 0.000 promoter-TSS (NM_001321935) promoter-TSS (NM_001321935) -594 NM_001321936 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr1-13925 chr1 22734771 22734981 + 8.72 0.000 intron (NM_004442, intron 1 of 15) intron (NM_004442, intron 1 of 15) 15359 NR_039832 100616391 NR_039832 ENSG00000265422 MIR4684 - microRNA 4684 ncRNA chr10-7032 chr10 79312056 79312266 + 8.72 0.000 intron (NM_020338, intron 24 of 24) intron (NM_020338, intron 24 of 24) -35308 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr4-4782 chr4 101306011 101306221 + 8.72 0.000 intron (NM_001130691, intron 1 of 12) intron (NM_001130691, intron 1 of 12) 24298 NR_031656 100302193 NR_031656 ENSG00000221265 MIR1255A MIRN1255A|hsa-mir-1255a microRNA 1255a ncRNA chr10-6965 chr10 67799442 67799652 + 8.72 0.000 intron (NM_021800, intron 4 of 4) intron (NM_021800, intron 4 of 4) 38632 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr1-9866 chr1 65657076 65657286 + 8.72 0.000 Intergenic L1PA7|LINE|L1 131492 NM_001198689 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr4-7003 chr4 23809385 23809595 + 8.72 0.000 intron (NM_001330752, intron 11 of 13) L2c|LINE|L2 71802 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr4-2937 chr4 96162753 96162963 + 8.72 0.000 Intergenic Intergenic -147845 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr16-5749 chr16 86191562 86191772 + 8.72 0.000 Intergenic Intergenic -4514 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr7-8188 chr7 31218574 31218784 + 8.72 0.000 Intergenic Intergenic 122047 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr10-4913 chr10 21906654 21906864 + 8.72 0.000 intron (NM_022365, intron 6 of 11) MIR|SINE|MIR 96971 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr5-7634 chr5 51206884 51207094 + 8.72 0.000 Intergenic Intergenic 176343 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA chr11-1626 chr11 68003957 68004167 + 8.72 0.000 promoter-TSS (NM_030930) promoter-TSS (NM_030930) 35 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr20-1855 chr20 31963236 31963446 + 8.72 0.000 Intergenic MER102b|DNA|hAT-Charlie -4810 NM_001011718 343702 Hs.666444 NM_001011718 ENSG00000260903 XKR7 C20orf159|dJ310O13.4 XK related 7 protein-coding chr6-6987 chr6 19957576 19957786 + 8.72 0.000 Intergenic Intergenic 120311 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr1-11415 chr1 58180148 58180358 + 8.72 0.000 intron (NM_001353980, intron 1 of 5) L1MB7|LINE|L1 70250 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr8-948 chr8 71547788 71547998 + 8.72 0.000 promoter-TSS (NM_001370334) promoter-TSS (NM_001370334) -189 NM_001370334 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr5-8991 chr5 163945100 163945310 + 8.72 0.000 Intergenic Intergenic 439586 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr6-3993 chr6 114366327 114366537 + 8.72 0.000 Intergenic Intergenic -303555 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr2-6117 chr2 217837216 217837426 + 8.72 0.000 intron (NM_001308023, intron 16 of 29) intron (NM_001308023, intron 16 of 29) -3588 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr1-10434 chr1 159173076 159173286 + 8.72 0.000 intron (NM_001127173, intron 1 of 8) intron (NM_001127173, intron 1 of 8) 1566 NM_021189 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr4-5771 chr4 72794843 72795053 + 8.72 0.000 Intergenic L1PB1|LINE|L1 -225727 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr2-8442 chr2 120596113 120596323 + 8.72 0.000 Intergenic Intergenic -129869 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr19-6645 chr19 33222610 33222820 + 8.72 0.000 intron (NM_019849, intron 1 of 10) intron (NM_019849, intron 1 of 10) 3135 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr18-2222 chr18 66942936 66943146 + 8.72 0.000 Intergenic L2|LINE|L2 -138543 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr2-10894 chr2 68203633 68203843 + 8.72 0.000 intron (NM_000945, intron 2 of 5) intron (NM_000945, intron 2 of 5) 45850 NM_020143 56902 Hs.262858 NM_020143 ENSG00000115946 PNO1 KHRBP1|RRP20 partner of NOB1 homolog protein-coding chr17-5695 chr17 51461498 51461708 + 8.72 0.000 Intergenic LTR50|LTR|ERVL 26176 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr22-979 chr22 28791830 28792040 + 8.72 0.000 Intergenic AluSz|SINE|Alu 8637 NM_001079539 7494 Hs.437638 NM_005080 ENSG00000100219 XBP1 TREB-5|TREB5|XBP-1|XBP2 X-box binding protein 1 protein-coding chr2-3997 chr2 91571306 91571516 + 8.72 0.000 Intergenic TAR1|Satellite|telo 88538 NR_027238 654342 Hs.469287 NR_027238 LSP1P4 - LSP1 pseudogene 4 pseudo chr5-8573 chr5 137342640 137342850 + 8.72 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 156581 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr2-7889 chr2 54565449 54565659 + 8.72 0.000 intron (NM_178313, intron 1 of 30) intron (NM_178313, intron 1 of 30) 7160 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr7-5393 chr7 32979324 32979534 + 8.72 0.000 promoter-TSS (NM_001284343) promoter-TSS (NM_001284343) -45 NM_001284343 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr4-4127 chr4 7310433 7310643 + 8.72 0.000 promoter-TSS (NR_039961) promoter-TSS (NR_039961) 88 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chrX-4513 chrX 66057100 66057310 + 8.72 0.000 Intergenic THE1B|LTR|ERVL-MaLR -17080 NM_001184830 11326 Hs.8904 NM_007268 ENSG00000155659 VSIG4 CRIg|Z39IG V-set and immunoglobulin domain containing 4 protein-coding chr12-5292 chr12 111064911 111065121 + 8.72 0.000 intron (NM_015267, intron 1 of 21) L1MEd|LINE|L1 30851 NM_015267 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr3-3138 chr3 159787874 159788084 + 8.72 0.000 intron (NM_001197113, intron 5 of 10) intron (NM_001197113, intron 5 of 10) -19367 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr1-12030 chr1 109932888 109933098 + 8.72 0.000 Intergenic AluJb|SINE|Alu 22144 NM_172211 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr11-7201 chr11 132587123 132587333 + 8.72 0.000 intron (NM_002545, intron 2 of 6) ERV3-16A3_I-int|LTR|ERVL 302926 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr11-6897 chr11 105212171 105212381 + 8.72 0.000 Intergenic Intergenic -72507 NM_021571 59082 Hs.56279 NM_021571 ENSG00000255501 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family member 18 protein-coding chr2-8259 chr2 100267080 100267290 + 8.72 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 55548 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr8-5170 chr8 97348640 97348850 + 8.72 0.000 intron (NR_125390, intron 2 of 2) MER96|DNA|hAT-Tip100 -9520 NR_145760 109617016 NR_145760 ENSG00000207215 SNORD3H - small nucleolar RNA, C/D box 3H snoRNA chr5-4554 chr5 20197850 20198060 + 8.72 0.000 intron (NM_001291956, intron 2 of 14) THE1D|LTR|ERVL-MaLR -107596 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA chr8-5104 chr8 58876684 58876894 + 8.72 0.000 intron (NM_014729, intron 3 of 8) L2b|LINE|L2 -216936 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr2-7012 chr2 148842469 148842679 + 8.72 0.000 Intergenic L1PA16|LINE|L1 -32653 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr11-9447 chr11 61180907 61181117 + 8.72 0.000 Intergenic L1MC1|LINE|L1 -19586 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr15-1043 chr15 34946620 34946830 + 8.72 0.000 intron (NM_014691, intron 5 of 34) SVA_D|Retroposon|SVA 23017 NM_014691 9716 Hs.510958 NM_014691 ENSG00000021776 AQR IBP160|fSAP164 aquarius intron-binding spliceosomal factor protein-coding chr14-1882 chr14 90518311 90518521 + 8.72 0.000 Intergenic Intergenic -1207 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr3-9074 chr3 27120180 27120390 + 8.72 0.000 intron (NM_001304384, intron 13 of 16) intron (NM_001304384, intron 13 of 16) 96238 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr3-8993 chr3 17806606 17806816 + 8.72 0.000 Intergenic Intergenic 63767 NR_135536 105376975 Hs.543238 NR_135536 LOC105376975 - uncharacterized LOC105376975 ncRNA chr9-2729 chr9 94511358 94511568 + 8.72 0.000 Intergenic LTR87|LTR|ERVL? -43582 NR_121568 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr6-1540 chr6 65434251 65434461 + 8.72 0.000 intron (NM_198283, intron 4 of 9) AluY|SINE|Alu 132938 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr5-5893 chr5 31712922 31713132 + 8.72 0.000 intron (NM_178140, intron 1 of 24) MER117|DNA|hAT-Charlie 73896 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr9-3269 chr9 32855448 32855658 + 8.72 0.000 Intergenic Intergenic 72013 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr12-5993 chr12 97007009 97007219 + 8.72 0.000 Intergenic Intergenic 99648 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr17-4723 chr17 32990984 32991194 + 8.72 0.000 promoter-TSS (NM_001317226) promoter-TSS (NM_001317226) -758 NM_173847 124912 Hs.434112 NM_173847 ENSG00000141316 SPACA3 ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1 sperm acrosome associated 3 protein-coding chr11-7055 chr11 120141656 120141866 + 8.72 0.000 Intergenic Intergenic -3648 NM_012101 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chrX-5117 chrX 128762945 128763155 + 8.72 0.000 Intergenic Intergenic -710647 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr7-3450 chr7 1174217 1174427 + 8.72 0.000 Intergenic Intergenic 13537 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr10-1882 chr10 102660531 102660741 + 8.72 0.000 Intergenic Intergenic 16141 NR_144321 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr13-3840 chr13 48942178 48942388 + 8.72 0.000 Intergenic L1MC3|LINE|L1 -33629 NM_001079673 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr6-2165 chr6 22071817 22072027 + 8.72 0.000 intron (NR_015410, intron 8 of 11) intron (NR_015410, intron 8 of 11) 75271 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr10-4985 chr10 30937812 30938022 + 8.72 0.000 intron (NM_001143771, intron 2 of 7) intron (NM_001143771, intron 2 of 7) 61600 NM_001143769 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr10-8197 chr10 71952748 71952958 + 8.72 0.000 Intergenic HERVFH21-int|LTR|ERV1 -11542 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr17-7724 chr17 33203979 33204189 + 8.72 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 88904 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr8-4682 chr8 139207347 139207557 + 8.72 0.000 Intergenic Intergenic -293411 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr11-5494 chr11 79941729 79941939 + 8.72 0.000 Intergenic Intergenic -500804 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr10-2991 chr10 90147797 90148007 + 8.72 0.000 Intergenic Intergenic -190529 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr6-3469 chr6 2504207 2504417 + 8.72 0.000 Intergenic Intergenic -130188 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr17-3674 chr17 11718916 11719126 + 8.72 0.000 intron (NM_001372, intron 26 of 68) L2c|LINE|L2 120551 NM_001372 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr20-3160 chr20 39536201 39536411 + 8.72 0.000 Intergenic UCON74|DNA?|DNA? -311558 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr3-9687 chr3 64765050 64765260 + 8.72 0.000 intron (NR_038264, intron 1 of 5) intron (NR_038264, intron 1 of 5) -77155 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr5-8474 chr5 132232708 132232918 + 8.72 0.000 Intergenic L2b|LINE|L2 -4960 NM_001365677 8974 Hs.519568 NM_004199 ENSG00000072682 P4HA2 MYP25 prolyl 4-hydroxylase subunit alpha 2 protein-coding chr14-1960 chr14 33990303 33990513 + 8.72 0.000 Intergenic Intergenic -39334 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr10-6802 chr10 12326584 12326794 + 8.72 0.000 Intergenic AluSz|SINE|Alu -22858 NM_020397 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr15-912 chr15 58346435 58346645 + 8.72 0.000 Intergenic Intergenic -85451 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr12-5211 chr12 106291405 106291615 + 8.72 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -11223 NM_152772 255394 Hs.696047 NM_152772 ENSG00000166046 TCP11L2 - t-complex 11 like 2 protein-coding chr9-5719 chr9 125759189 125759399 + 8.72 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 11111 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr2-10220 chr2 107389686 107389896 + 8.72 0.000 Intergenic L1MC5a|LINE|L1 -40266 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr6-5092 chr6 118780863 118781073 + 8.72 0.000 Intergenic Intergenic -1740 NR_037662 100287632 Hs.334026 NR_037662 SELENOKP3 - selenoprotein K pseudogene 3 pseudo chr14-5176 chr14 92323140 92323350 + 8.72 0.000 promoter-TSS (NM_153646) promoter-TSS (NM_153646) 80 NM_153647 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr1-10050 chr1 90824440 90824650 + 8.72 0.000 intron (NR_135038, intron 1 of 2) intron (NR_135038, intron 1 of 2) 11616 NR_147932 105378853 Hs.546492 NR_135038 ENSG00000233593 LINC02609 - long intergenic non-protein coding RNA 2609 ncRNA chr4-4551 chr4 72270294 72270504 + 8.72 0.000 Intergenic L2|LINE|L2 231267 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chrX-2492 chrX 88726669 88726879 + 8.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -20451 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr22-1469 chr22 50544357 50544567 + 8.72 0.000 Intergenic CpG -1437 NM_138433 113730 Hs.137007 NM_138433 ENSG00000130487 KLHDC7B - kelch domain containing 7B protein-coding chr1-8735 chr1 238660827 238661037 + 8.72 0.000 Intergenic Intergenic -174915 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr8-3656 chr8 13274154 13274364 + 8.72 0.000 intron (NM_001348082, intron 5 of 16) intron (NM_001348082, intron 5 of 16) 2262 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr5-7463 chr5 32646650 32646860 + 8.72 0.000 Intergenic Intergenic -44117 NM_001364458 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr22-4162 chr22 45130552 45130762 + 8.72 0.000 Intergenic LTR7B|LTR|ERV1 21927 NR_038957 100506714 Hs.189902 NR_038956 NUP50-DT NUP50-AS1 NUP50 divergent transcript ncRNA chr17-6051 chr17 79369604 79369814 + 8.72 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 146439 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr8-4998 chr8 142939970 142940180 + 8.72 0.000 Intergenic Intergenic -22232 NM_000498 1585 Hs.632054 NM_000498 ENSG00000179142 CYP11B2 ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo cytochrome P450 family 11 subfamily B member 2 protein-coding chr4-2884 chr4 76963454 76963664 + 8.60 0.000 intron (NM_018243, intron 1 of 9) MER3|DNA|hAT-Charlie 13807 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr17-5592 chr17 47782329 47782539 + 8.60 0.000 Intergenic L1MD2|LINE|L1 39360 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding chr22-2913 chr22 46563547 46563757 + 8.60 0.000 Intergenic Intergenic -13436 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr19-6766 chr19 40407744 40407954 + 8.60 0.000 intron (NM_020956, intron 4 of 5) intron (NM_020956, intron 4 of 5) 5515 NM_020956 57716 Hs.205457 NM_020956 ENSG00000105227 PRX CMT4F periaxin protein-coding chr7-6112 chr7 121113370 121113580 + 8.60 0.000 intron (NM_001105533, intron 6 of 17) L2b|LINE|L2 124084 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr21-728 chr21 36740800 36741010 + 8.60 0.000 intron (NM_009586, intron 7 of 9) intron (NM_009586, intron 7 of 9) 41790 NM_005069 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 SIM bHLH transcription factor 2 protein-coding chr1-7272 chr1 234069942 234070152 + 8.60 0.000 intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -144164 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr5-7303 chr5 14673912 14674122 + 8.60 0.000 intron (NM_138348, intron 2 of 6) intron (NM_138348, intron 2 of 6) 9299 NM_138348 90268 Hs.406335 NM_138348 ENSG00000154124 OTULIN AIPDS|FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding chr22-3531 chr22 11329824 11330034 + 8.60 0.000 Intergenic CER|Satellite|Satellite -368400 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr7-9536 chr7 140074442 140074652 + 8.60 0.000 Intergenic LTR16A2|LTR|ERVL -10826 NM_022750 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr1-14540 chr1 51735623 51735833 + 8.60 0.000 intron (NM_148905, intron 1 of 18) intron (NM_148905, intron 1 of 18) 5878 NM_148905 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr3-6196 chr3 61519392 61519602 + 8.60 0.000 Intergenic Intergenic -42074 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr3-3996 chr3 57864882 57865092 + 8.60 0.000 intron (NM_001304420, intron 11 of 21) intron (NM_001304420, intron 11 of 21) -24927 NM_001311179 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr5-4232 chr5 133113746 133113956 + 8.60 0.000 Intergenic Intergenic 61838 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr6-4220 chr6 4543589 4543799 + 8.60 0.000 Intergenic L1MD3|LINE|L1 54896 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr1-13210 chr1 209366759 209366969 + 8.60 0.000 Intergenic MIR1_Amn|SINE|MIR -5191 NR_146491 101929476 Hs.568721 NR_146491 LINC01698 - long intergenic non-protein coding RNA 1698 ncRNA chr15-998 chr15 70375210 70375420 + 8.60 0.000 Intergenic Intergenic 130613 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr12-7189 chr12 49585870 49586080 + 8.60 0.000 intron (NR_027450, intron 6 of 6) intron (NR_027450, intron 6 of 6) -17830 NM_001278341 10445 Hs.25313 NM_006337 ENSG00000187778 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding chr10-6836 chr10 22335346 22335556 + 8.60 0.000 Intergenic CpG -9994 NM_001253855 9576 Hs.655170 NM_012443 ENSG00000077327 SPAG6 CT141|Repro-SA-1|pf16 sperm associated antigen 6 protein-coding chr2-10946 chr2 81859800 81860010 + 8.60 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -392959 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr6-3646 chr6 133646543 133646753 + 8.60 0.000 intron (NR_109982, intron 4 of 8) intron (NR_109982, intron 4 of 8) -174499 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr5-8777 chr5 148585658 148585868 + 8.60 0.000 intron (NM_001040172, intron 1 of 5) intron (NM_001040172, intron 1 of 5) 51298 NM_001040169 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr5-4010 chr5 30863623 30863833 + 8.60 0.000 Intergenic MIR|SINE|MIR -329958 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr13-2044 chr13 49113979 49114189 + 8.60 0.000 intron (NM_014923, intron 1 of 23) intron (NM_014923, intron 1 of 23) 3767 NM_014923 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr1-3344 chr1 44005948 44006158 + 8.60 0.000 intron (NR_048548, intron 4 of 12) intron (NR_048548, intron 4 of 12) 11110 NM_006934 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr1-8897 chr1 6026211 6026421 + 8.60 0.000 promoter-TSS (NM_003636) promoter-TSS (NM_003636) -17 NM_003636 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr3-6741 chr3 139466304 139466514 + 8.60 0.000 intron (NM_004164, intron 1 of 3) intron (NM_004164, intron 1 of 3) 10107 NM_004164 5948 Hs.655516 NM_004164 ENSG00000114113 RBP2 CRABP-II|CRBP2|CRBPII|RBPC2 retinol binding protein 2 protein-coding chr9-5907 chr9 132631374 132631584 + 8.60 0.000 intron (NM_001322341, intron 16 of 20) intron (NM_001322341, intron 16 of 20) 31847 NM_001322343 64794 Hs.660767 NM_022779 ENSG00000125485 DDX31 PPP1R25 DEAD-box helicase 31 protein-coding chr4-2703 chr4 3210501 3210711 + 8.60 0.000 intron (NM_002111, intron 47 of 66) intron (NM_002111, intron 47 of 66) -33763 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr11-2993 chr11 118157691 118157901 + 8.60 0.000 Intergenic Intergenic -4881 NM_174934 6330 Hs.65239 NM_174934 ENSG00000177098 SCN4B ATFB17|LQT10|Navbeta4 sodium voltage-gated channel beta subunit 4 protein-coding chr8-5146 chr8 78407206 78407416 + 8.60 0.000 Intergenic Intergenic -109029 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr17-8177 chr17 61843482 61843692 + 8.60 0.000 intron (NM_032043, intron 6 of 19) MSTB|LTR|ERVL-MaLR 19972 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding chr15-3752 chr15 62355304 62355514 + 8.60 0.000 Intergenic MIRc|SINE|MIR 12380 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr18-846 chr18 22958823 22959033 + 8.60 0.000 intron (NM_002894, intron 4 of 18) HAL1|LINE|L1 25052 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr7-3277 chr7 22732285 22732495 + 8.60 0.000 TTS (NM_001318095) TTS (NM_001318095) -4770 NR_131935 541472 Hs.512234 NR_131935 ENSG00000179428 LOC541472 - uncharacterized LOC541472 ncRNA chr14-4383 chr14 28217527 28217737 + 8.60 0.000 Intergenic L1MA2|LINE|L1 -544411 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chrX-1345 chrX 136609500 136609710 + 8.60 0.000 Intergenic Intergenic -29938 NR_038461 100128420 Hs.152595 NR_038461 ENSG00000233093 LINC00892 - long intergenic non-protein coding RNA 892 ncRNA chr16-4212 chr16 12507345 12507555 + 8.60 0.000 intron (NM_032167, intron 19 of 20) intron (NM_032167, intron 19 of 20) -212871 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr3-5604 chr3 9159239 9159449 + 8.60 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -33149 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr2-13554 chr2 153471963 153472173 + 8.60 0.000 Intergenic Intergenic 6694 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr12-2469 chr12 60192036 60192246 + 8.60 0.000 Intergenic Intergenic 502771 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr18-2364 chr18 57590161 57590371 + 8.60 0.000 Intergenic L2a|LINE|L2 -3564 NM_001371095 chr4-3380 chr4 22608707 22608917 + 8.60 0.000 Intergenic Intergenic -84102 NM_020973 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr2-10662 chr2 20157558 20157768 + 8.60 0.000 Intergenic Intergenic 67467 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr6-988 chr6 169618555 169618765 + 8.60 0.000 intron (NM_182552, intron 21 of 25) intron (NM_182552, intron 21 of 25) 83369 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr15-2312 chr15 75802261 75802471 + 8.60 0.000 Intergenic Intergenic -40051 NR_036198 100423035 NR_036198 ENSG00000284385 MIR4313 - microRNA 4313 ncRNA chr3-5030 chr3 31886413 31886623 + 8.60 0.000 intron (NM_001174060, intron 1 of 10) intron (NM_001174060, intron 1 of 10) -95232 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr2-4516 chr2 28521580 28521790 + 8.60 0.000 intron (NM_001170585, intron 4 of 56) intron (NM_001170585, intron 4 of 56) 25614 NM_001170585 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr1-16584 chr1 236118445 236118655 + 8.60 0.000 Intergenic Intergenic -23989 NM_003272 7107 Hs.498160 NM_003272 ENSG00000077585 GPR137B TM7SF1 G protein-coupled receptor 137B protein-coding chr7-3242 chr7 1905690 1905900 + 8.60 0.000 intron (NM_001013837, intron 17 of 18) AluSx|SINE|Alu 34776 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr9-6447 chr9 84028105 84028315 + 8.60 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -35233 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr9-7021 chr9 118676584 118676794 + 8.60 0.000 Intergenic Charlie8|DNA|hAT-Charlie -2982 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr5-6641 chr5 44436022 44436232 + 8.60 0.000 Intergenic L2|LINE|L2 -46707 NM_004465 2255 Hs.248049 NM_004465 ENSG00000070193 FGF10 - fibroblast growth factor 10 protein-coding chr4-6252 chr4 71664513 71664723 + 8.60 0.000 Intergenic MER39|LTR|ERV1 119461 NM_000583 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr3-8330 chr3 68746940 68747150 + 8.60 0.000 intron (NM_001005527, intron 4 of 5) MER20|DNA|hAT-Charlie 185502 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr6-5995 chr6 98839753 98839963 + 8.60 0.000 TTS (NM_005604) TTS (NM_005604) 5284 NM_005604 5454 Hs.182505 NM_005604 ENSG00000184486 POU3F2 BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7 POU class 3 homeobox 2 protein-coding chr20-1147 chr20 48658080 48658290 + 8.60 0.000 exon (NM_020820, exon 17 of 40) exon (NM_020820, exon 17 of 40) 169814 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr10-2852 chr10 65319861 65320071 + 8.60 0.000 Intergenic L2a|LINE|L2 -251459 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chrX-4928 chrX 110395918 110396128 + 8.60 0.000 intron (NM_001171689, intron 2 of 7) intron (NM_001171689, intron 2 of 7) -23034 NM_020769 57529 Hs.201071 NM_020769 ENSG00000243978 RTL9 MAR9|MART9|RGAG1|SIRH10 retrotransposon Gag like 9 protein-coding chr2-13361 chr2 136190655 136190865 + 8.60 0.000 Intergenic Intergenic -72605 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr7-3880 chr7 107711377 107711587 + 8.60 0.000 intron (NM_000441, intron 19 of 20) intron (NM_000441, intron 19 of 20) 32150 NR_144536 101927974 Hs.432792 NR_144536 ENSG00000241764 LOC101927974 - uncharacterized LOC101927974 ncRNA chrX-2926 chrX 153060064 153060274 + 8.60 0.000 3' UTR (NM_001282535, exon 3 of 3) 3' UTR (NM_001282535, exon 3 of 3) 3699 NM_001282535 29944 Hs.449627 NM_013364 ENSG00000183837 PNMA3 MA3|MA5 PNMA family member 3 protein-coding chr6-8446 chr6 153157778 153157988 + 8.60 0.000 Intergenic ERVL-E-int|LTR|ERVL -26601 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr2-4514 chr2 27683710 27683920 + 8.60 0.000 intron (NM_018158, intron 9 of 13) AluSx3|SINE|Alu -19975 NM_001282730 9913 Hs.6232 NM_014860 ENSG00000119760 SUPT7L SPT7L|STAF65|STAF65(gamma)|STAF65G|SUPT7H SPT7 like, STAGA complex gamma subunit protein-coding chr10-6563 chr10 75802990 75803200 + 8.60 0.000 intron (NM_032024, intron 1 of 5) MIRb|SINE|MIR 20334 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chrX-2478 chrX 87036047 87036257 + 8.60 0.000 Intergenic Intergenic -481650 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr7-8226 chr7 33667309 33667519 + 8.60 0.000 Intergenic L3b|LINE|CR1 -237501 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr8-4583 chr8 129291293 129291503 + 8.60 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -50158 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA chr4-5134 chr4 152595301 152595511 + 8.60 0.000 Intergenic Intergenic 58978 NR_039658 100616193 NR_039658 ENSG00000283792 MIR4453 - microRNA 4453 ncRNA chr19-4937 chr19 44581379 44581589 + 8.60 0.000 Intergenic L2a|LINE|L2 -24567 NR_027754 388550 Hs.446909 NR_027754 ENSG00000230666 CEACAM22P - carcinoembryonic antigen related cell adhesion molecule 22, pseudogene pseudo chr13-1813 chr13 47798984 47799194 + 8.60 0.000 Intergenic Intergenic 133533 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr10-7941 chr10 52776229 52776439 + 8.60 0.000 Intergenic MER90a|LTR|ERV1 -4634 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr10-5407 chr10 75679413 75679623 + 8.60 0.000 intron (NR_131178, intron 1 of 7) MIRb|SINE|MIR 32009 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr10-5408 chr10 75946400 75946610 + 8.60 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 163744 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr6-6844 chr6 8141416 8141626 + 8.60 0.000 Intergenic Intergenic -38926 NR_037618 100526837 Hs.719272 NR_037618 EEF1E1-BLOC1S5 EEF1E1-MUTED EEF1E1-BLOC1S5 readthrough (NMD candidate) ncRNA chr7-5665 chr7 63186324 63186534 + 8.60 0.000 Intergenic AluSc|SINE|Alu 117627 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr2-5769 chr2 222690736 222690946 + 8.60 0.000 intron (NM_058165, intron 3 of 5) intron (NM_058165, intron 3 of 5) 19183 NM_058165 116255 Hs.344090 NM_058165 ENSG00000124003 MOGAT1 DGAT2L|DGAT2L1|MGAT1 monoacylglycerol O-acyltransferase 1 protein-coding chr1-6885 chr1 117815277 117815487 + 8.60 0.000 Intergenic LTR18C|LTR|ERVL 114239 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr1-6646 chr1 45349434 45349644 + 8.60 0.000 intron (NM_007170, intron 5 of 10) intron (NM_007170, intron 5 of 10) -9069 NR_146882 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr6-1875 chr6 81172505 81172715 + 8.60 0.000 Intergenic Intergenic 580071 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr12-7793 chr12 97459929 97460139 + 8.60 0.000 Intergenic Intergenic -2742 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr1-10451 chr1 160638469 160638679 + 8.60 0.000 intron (NM_001330754, intron 1 of 7) L2-3_Crp|LINE|L2 8470 NR_104401 6504 Hs.523660 NM_003037 ENSG00000117090 SLAMF1 CD150|CDw150|SLAM signaling lymphocytic activation molecule family member 1 protein-coding chr2-14272 chr2 215387918 215388128 + 8.60 0.000 intron (NM_212482, intron 27 of 45) intron (NM_212482, intron 27 of 45) 48045 NM_001365519 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr14-3212 chr14 73936868 73937078 + 8.60 0.000 intron (NM_152445, intron 7 of 8) intron (NM_152445, intron 7 of 8) -12961 NM_182480 51004 Hs.131555 NM_182476 ENSG00000119723 COQ6 CGI-10|CGI10|COQ10D6 coenzyme Q6, monooxygenase protein-coding chr14-4881 chr14 71714371 71714581 + 8.60 0.000 intron (NM_001354286, intron 18 of 24) intron (NM_001354286, intron 18 of 24) 128178 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr12-7106 chr12 45548024 45548234 + 8.60 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 179792 NR_028408 400027 Hs.597122 NR_028408 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA chr8-7081 chr8 117576555 117576765 + 8.60 0.000 Intergenic Intergenic 55947 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr17-2108 chr17 2717227 2717437 + 8.60 0.000 Intergenic AluSz|SINE|Alu 5023 NR_136412 105371592 Hs.731739 NR_136412 ENSG00000262050 LOC105371592 - uncharacterized LOC105371592 ncRNA chr3-3431 chr3 125527438 125527648 + 8.60 0.000 Intergenic Intergenic -7341 NM_003794 8723 Hs.507243 NM_003794 ENSG00000114520 SNX4 ATG24B sorting nexin 4 protein-coding chr12-1893 chr12 64824794 64825004 + 8.60 0.000 exon (NM_015279, exon 1 of 12) exon (NM_015279, exon 1 of 12) 252 NM_001330186 23329 Hs.192492 NM_015279 ENSG00000111490 TBC1D30 - TBC1 domain family member 30 protein-coding chr8-5644 chr8 108966407 108966617 + 8.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR -120116 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr19-6578 chr19 21551298 21551508 + 8.60 0.000 Intergenic SVA_D|Retroposon|SVA 45801 NM_001346912 353088 Hs.572567 NM_001001415 ENSG00000197013 ZNF429 - zinc finger protein 429 protein-coding chr5-8965 chr5 160627448 160627658 + 8.60 0.000 intron (NM_001366652, intron 12 of 24) L1M5|LINE|L1 57838 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr19-2792 chr19 47097689 47097899 + 8.60 0.000 intron (NM_015168, intron 2 of 14) intron (NM_015168, intron 2 of 14) 15982 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chr1-14007 chr1 26051591 26051801 + 8.60 0.000 3' UTR (NM_032588, exon 9 of 9) 3' UTR (NM_032588, exon 9 of 9) -5578 NM_001004434 7780 Hs.143545 NM_032513 ENSG00000158014 SLC30A2 PP12488|TNZD|ZNT2|ZnT-2 solute carrier family 30 member 2 protein-coding chr7-5211 chr7 12454952 12455162 + 8.60 0.000 Intergenic Intergenic -41372 NR_136261 102725191 Hs.602382 NR_136261 ENSG00000226690 LOC102725191 - uncharacterized LOC102725191 ncRNA chr9-5491 chr9 101856545 101856755 + 8.60 0.000 Intergenic Charlie15a|DNA|hAT-Charlie -118070 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr15-3343 chr15 81556226 81556436 + 8.60 0.000 Intergenic Intergenic -182118 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr11-2895 chr11 59531003 59531213 + 8.60 0.000 Intergenic AluSz|SINE|Alu 16195 NM_001004711 390199 Hs.553757 NM_001004711 ENSG00000172742 OR4D9 OR11-253 olfactory receptor family 4 subfamily D member 9 protein-coding chr16-3949 chr16 86337339 86337549 + 8.60 0.000 non-coding (NR_024406, exon 4 of 7) non-coding (NR_024406, exon 4 of 7) 8235 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr1-6794 chr1 86436949 86437159 + 8.60 0.000 intron (NM_006536, intron 6 of 13) intron (NM_006536, intron 6 of 13) 12883 NM_006536 9635 Hs.241551 NM_006536 ENSG00000137975 CLCA2 CACC|CACC3|CLCRG2|CaCC-3 chloride channel accessory 2 protein-coding chr5-2392 chr5 96243248 96243458 + 8.60 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 164215 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr3-9225 chr3 38004519 38004729 + 8.60 0.000 intron (NM_015873, intron 15 of 18) intron (NM_015873, intron 15 of 18) 10486 NR_163267 50853 Hs.103665 NM_015873 ENSG00000136059 VILL - villin like protein-coding chrX-3359 chrX 140504024 140504234 + 8.60 0.000 exon (NM_005634, exon 1 of 1) exon (NM_005634, exon 1 of 1) 931 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr13-2391 chr13 41971128 41971338 + 8.60 0.000 intron (NR_039974, intron 2 of 3) MER21C|LTR|ERVL 10064 NR_039974 100507240 Hs.147766 NR_039974 ENSG00000278338 VWA8-AS1 - VWA8 antisense RNA 1 (head to head) ncRNA chr8-4648 chr8 134843710 134843920 + 8.60 0.000 Intergenic Intergenic 5746 NR_126028 552853 Hs.575612 NR_126028 ENSG00000253433 NCRNA00250 C8orf24 non-protein coding RNA 250 ncRNA chr1-15587 chr1 160390854 160391064 + 8.60 0.000 Intergenic L1PA6|LINE|L1 -9605 NM_020335 57216 Hs.99477 NM_020335 ENSG00000162738 VANGL2 LPP1|LTAP|STB1|STBM|STBM1 VANGL planar cell polarity protein 2 protein-coding chr2-5547 chr2 163970095 163970305 + 8.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -234192 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr18-1516 chr18 7158447 7158657 + 8.60 0.000 Intergenic Intergenic -40755 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr10-8477 chr10 88855578 88855788 + 8.60 0.000 Intergenic MER50|LTR|ERV1 -3839 NM_144590 118932 Hs.217484 NM_144590 ENSG00000152766 ANKRD22 - ankyrin repeat domain 22 protein-coding chr2-6656 chr2 8169570 8169780 + 8.60 0.000 intron (NR_034135, intron 7 of 8) MIR|SINE|MIR 158744 NR_034135 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr12-7830 chr12 100845871 100846081 + 8.60 0.000 intron (NM_001286615, intron 1 of 27) MIRb|SINE|MIR 51200 NM_178826 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr12-4572 chr12 30010227 30010437 + 8.60 0.000 Intergenic Intergenic -225573 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr16-4558 chr16 66678081 66678291 + 8.60 0.000 intron (NM_181521, intron 1 of 3) AluJo|SINE|Alu 18557 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr15-4492 chr15 51089376 51089586 + 8.60 0.000 intron (NM_001311175, intron 1 of 1) L2c|LINE|L2 5425 NM_001311175 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr4-5600 chr4 860071 860281 + 8.60 0.000 intron (NM_005255, intron 23 of 27) AluJr|SINE|Alu -34047 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr15-3410 chr15 89704772 89704982 + 8.60 0.000 TTS (NM_001284396) TTS (NM_001284396) 14066 NM_001284396 56964 Hs.177557 NM_020212 ENSG00000140527 WDR93 - WD repeat domain 93 protein-coding chr17-6483 chr17 21115370 21115580 + 8.60 0.000 Intergenic Intergenic -11453 NM_015510 25979 Hs.386989 NM_015510 ENSG00000109016 DHRS7B CGI-93|SDR32C1 dehydrogenase/reductase 7B protein-coding chr5-7823 chr5 66970040 66970250 + 8.60 0.000 intron (NM_001290226, intron 1 of 26) intron (NM_001290226, intron 1 of 26) 11072 NM_001290226 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr7-4850 chr7 104802885 104803095 + 8.60 0.000 intron (NR_034142, intron 1 of 2) L2|LINE|L2 1102 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr10-2589 chr10 73233046 73233256 + 8.60 0.000 exon (NM_173348, exon 10 of 14) exon (NM_173348, exon 10 of 14) 14104 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding chr2-10731 chr2 30515027 30515237 + 8.60 0.000 intron (NM_001304445, intron 3 of 7) L2c|LINE|L2 67886 NM_001304445 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr1-10672 chr1 184959745 184959955 + 8.60 0.000 intron (NM_052966, intron 1 of 13) L1MEc|LINE|L1 14658 NM_052966 116496 Hs.518662 NM_052966 ENSG00000135842 NIBAN1 C1orf24|FAM129A|GIG39|NIBAN niban apoptosis regulator 1 protein-coding chr6-3270 chr6 152111406 152111616 + 8.60 0.000 intron (NM_001328100, intron 6 of 6) intron (NM_001328100, intron 6 of 6) 56776 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr13-1551 chr13 30448713 30448923 + 8.60 0.000 Intergenic Intergenic 15509 NM_001313892 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr7-6316 chr7 140727909 140728119 + 8.60 0.000 intron (NM_001354609, intron 18 of 18) intron (NM_001354609, intron 18 of 18) -30937 NR_024454 100134713 Hs.534141 NR_024454 ENSG00000240889 NDUFB2-AS1 - NDUFB2 antisense RNA 1 ncRNA chr10-6952 chr10 64384318 64384528 + 8.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR -441105 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr19-6082 chr19 3165671 3165881 + 8.60 0.000 Intergenic L1MC4a|LINE|L1 -10601 NR_110670 100996351 NR_110670 ENSG00000267551 LOC100996351 - uncharacterized LOC100996351 ncRNA chr2-5327 chr2 82289878 82290088 + 8.60 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -566820 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo KI270736.1-6 KI270736.1 166143 166353 + 8.60 0.000 NA NA NA NA chr7-6336 chr7 147045839 147046049 + 8.60 0.000 intron (NM_014141, intron 3 of 22) intron (NM_014141, intron 3 of 22) 51665 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr11-5120 chr11 126140963 126141173 + 8.60 0.000 Intergenic Intergenic 70582 NM_032795 84881 Hs.150458 NM_032795 ENSG00000165526 RPUSD4 - RNA pseudouridine synthase D4 protein-coding chr9-3075 chr9 3828348 3828558 + 8.60 0.000 intron (NM_001042413, intron 10 of 10) intron (NM_001042413, intron 10 of 10) -70193 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr8-3110 chr8 40719809 40720019 + 8.60 0.000 intron (NM_024645, intron 3 of 6) intron (NM_024645, intron 3 of 6) 177912 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr8-3068 chr8 18120045 18120255 + 8.60 0.000 Intergenic Intergenic -35189 NM_001127505 427 Hs.527412 NM_004315 ENSG00000104763 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase 1 protein-coding chr3-4632 chr3 18265740 18265950 + 8.60 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 159494 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr5-6798 chr5 95802006 95802216 + 8.60 0.000 Intergenic Intergenic 20615 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr1-5452 chr1 51303528 51303738 + 8.60 0.000 intron (NM_001080494, intron 8 of 17) intron (NM_001080494, intron 8 of 17) -5672 NM_001297666 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr15-2481 chr15 92681374 92681584 + 8.60 0.000 Intergenic Intergenic -25704 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr11-9225 chr11 40744481 40744691 + 8.60 0.000 intron (NM_020929, intron 1 of 4) L2a|LINE|L2 -451456 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr7-4284 chr7 16952031 16952241 + 8.60 0.000 Intergenic Intergenic -70153 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr5-2996 chr5 1662478 1662688 + 8.60 0.000 Intergenic L3|LINE|CR1 -28578 NR_003713 728613 Hs.720393 NR_003713 LOC728613 - programmed cell death 6 pseudogene pseudo chr2-10259 chr2 120174677 120174887 + 8.60 0.000 intron (NM_001330310, intron 24 of 24) intron (NM_001330310, intron 24 of 24) 48618 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr12-6942 chr12 26128258 26128468 + 8.60 0.000 Intergenic Intergenic -3326 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr14-4637 chr14 54338662 54338872 + 8.60 0.000 Intergenic Intergenic -58101 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr2-7985 chr2 65874697 65874907 + 8.60 0.000 Intergenic Intergenic -442203 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr7-8758 chr7 78150498 78150708 + 8.60 0.000 intron (NM_001301128, intron 15 of 20) intron (NM_001301128, intron 15 of 20) -196639 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr4-6835 chr4 8334634 8334844 + 8.60 0.000 Intergenic Intergenic 14563 NR_149125 105374374 Hs.145224 NR_149125 ENSG00000249145 LINC02517 - long intergenic non-protein coding RNA 2517 ncRNA chr3-7157 chr3 186126791 186127001 + 8.60 0.000 Intergenic Intergenic -17807 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr19-2329 chr19 38181735 38181945 + 8.60 0.000 intron (NM_015073, intron 15 of 21) AluSx|SINE|Alu 18744 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr19-2954 chr19 8609322 8609532 + 8.60 0.000 intron (NM_030957, intron 1 of 25) intron (NM_030957, intron 1 of 25) 1288 NM_030957 81794 Hs.657508 NM_030957 ENSG00000142303 ADAMTS10 ADAM-TS10|ADAMTS-10|WMS|WMS1 ADAM metallopeptidase with thrombospondin type 1 motif 10 protein-coding chr2-7029 chr2 151931408 151931618 + 8.60 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) 40539 NM_001330118 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr9-5077 chr9 34129531 34129741 + 8.60 0.000 Intergenic AluSx|SINE|Alu -2938 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr16-4643 chr16 74107175 74107385 + 8.60 0.000 Intergenic AluSx3|SINE|Alu 108241 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr5-5650 chr5 157555050 157555260 + 8.60 0.000 intron (NM_033274, intron 3 of 22) MIRb|SINE|MIR 20620 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr1-5688 chr1 48595995 48596205 + 8.60 0.000 intron (NM_001323575, intron 9 of 12) MIRc|SINE|MIR -123892 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr5-8004 chr5 86842974 86843184 + 8.60 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 96261 NR_105017 100505878 Hs.246405 NR_105017 LINC02059 - long intergenic non-protein coding RNA 2059 ncRNA chr5-9115 chr5 173967198 173967408 + 8.60 0.000 Intergenic Intergenic -21867 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chr14-1964 chr14 35415121 35415331 + 8.60 0.000 Intergenic Intergenic -10472 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr11-7575 chr11 32154540 32154750 + 8.60 0.000 Intergenic MER20|DNA|hAT-Charlie -10733 NR_132770 106635521 NR_132770 SNORA88 - small nucleolar RNA, H/ACA box 88 snoRNA chr14-681 chr14 75069102 75069312 + 8.60 0.000 promoter-TSS (NM_001042430) promoter-TSS (NM_001042430) 283 NR_126394 97 Hs.18573 NM_001107 ENSG00000119640 ACYP1 ACYPE acylphosphatase 1 protein-coding chr6-1206 chr6 36875108 36875318 + 8.60 0.000 promoter-TSS (NM_016059) promoter-TSS (NM_016059) -410 NM_016059 51645 Hs.27693 NM_016059 ENSG00000137168 PPIL1 CGI-124|CYPL1|PPIase|hCyPX peptidylprolyl isomerase like 1 protein-coding chr6-2387 chr6 144346798 144347008 + 8.60 0.000 intron (NM_007124, intron 1 of 73) (CTAT)n|Simple_repeat|Simple_repeat 55166 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr4-3585 chr4 2169073 2169283 + 8.60 0.000 intron (NM_181808, intron 13 of 25) L2a|LINE|L2 72943 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr2-2189 chr2 38074950 38075160 + 8.60 0.000 exon (NM_000104, exon 2 of 3) exon (NM_000104, exon 2 of 3) 1126 NM_000104 1545 Hs.154654 NM_000104 ENSG00000138061 CYP1B1 ASGD6|CP1B|CYPIB1|GLC3A|P4501B1 cytochrome P450 family 1 subfamily B member 1 protein-coding chr8-6145 chr8 30564069 30564279 + 8.60 0.000 intron (NM_006867, intron 8 of 9) L2c|LINE|L2 -74406 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr22-3393 chr22 34493741 34493951 + 8.60 0.000 Intergenic Intergenic 504070 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr10-2301 chr10 30804550 30804760 + 8.60 0.000 Intergenic Intergenic 81436 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr9-8207 chr9 108887629 108887839 + 8.60 0.000 intron (NM_001330749, intron 27 of 34) MLT1F2|LTR|ERVL-MaLR 25468 NM_006687 10881 Hs.123530 NM_006687 ENSG00000187003 ACTL7A - actin like 7A protein-coding chr18-1236 chr18 48488564 48488774 + 8.60 0.000 Intergenic Intergenic -50362 NM_014772 9811 Hs.145230 NM_014772 ENSG00000134030 CTIF Gm672|KIAA0427 cap binding complex dependent translation initiation factor protein-coding chr3-4095 chr3 105141319 105141529 + 8.60 0.000 Intergenic Intergenic -225289 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr3-10683 chr3 150831278 150831488 + 8.60 0.000 Intergenic Intergenic -68214 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding chr4-2621 chr4 146371779 146371989 + 8.60 0.000 intron (NM_001317816, intron 4 of 10) intron (NM_001317816, intron 4 of 10) -36699 NR_107003 102465837 NR_107003 ENSG00000278438 MIR7849 hsa-mir-7849 microRNA 7849 ncRNA chr2-5793 chr2 228869618 228869828 + 8.60 0.000 Intergenic Intergenic -258328 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr8-4129 chr8 73887799 73888009 + 8.60 0.000 Intergenic L1MA5A|LINE|L1 8922 NR_147034 101926947 Hs.521636 NR_147034 LINC01617 C8orf23|NCRNA00249|XLOC_006844 long intergenic non-protein coding RNA 1617 ncRNA chrX-908 chrX 129635032 129635242 + 8.60 0.000 Intergenic (TTCA)n|Simple_repeat|Simple_repeat 19819 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr15-2532 chr15 42392293 42392503 + 8.60 0.000 intron (NM_000070, intron 6 of 23) intron (NM_000070, intron 6 of 23) -9992 NM_173088 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr3-2002 chr3 8320231 8320441 + 8.60 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 181322 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr1-6618 chr1 42479716 42479926 + 8.60 0.000 intron (NM_001355224, intron 2 of 22) LTR53B|LTR|ERVL 16535 NM_001355227 728621 Hs.729640 NM_001080850 ENSG00000186409 CCDC30 PFD6L|PFDN6L coiled-coil domain containing 30 protein-coding chr9-4504 chr9 38499650 38499860 + 8.60 0.000 Intergenic Intergenic 45617 NR_047651 100289137 Hs.644630 NR_047651 ENSG00000283486 FAM95C - family with sequence similarity 95 member C ncRNA chr10-1324 chr10 86748298 86748508 + 8.60 0.000 Intergenic Intergenic -8236 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr16-6234 chr16 29129606 29129816 + 8.60 0.000 Intergenic Intergenic 54869 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr9-3806 chr9 128494623 128494833 + 8.60 0.000 exon (NM_001242354, exon 16 of 16) exon (NM_001242354, exon 16 of 16) -9964 NM_001003722 2733 Hs.522418 NM_001499 ENSG00000119392 GLE1 CAAHC|CAAHD|GLE1L|LCCS|LCCS1|hGLE1 GLE1 RNA export mediator protein-coding chr18-860 chr18 32664291 32664501 + 8.60 0.000 Intergenic Intergenic 108627 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr14-3532 chr14 104034839 104035049 + 8.60 0.000 intron (NM_153046, intron 31 of 35) intron (NM_153046, intron 31 of 35) -50756 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chrX-2471 chrX 85784313 85784523 + 8.60 0.000 Intergenic AluY|SINE|Alu -51362 NR_031710 100302171 NR_031710 ENSG00000283435 MIR1321 MIRN1321|hsa-mir-1321 microRNA 1321 ncRNA chr1-8946 chr1 8702390 8702600 + 8.60 0.000 intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 115145 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr5-2836 chr5 56986790 56987000 + 8.60 0.000 Intergenic Intergenic -34765 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr8-4822 chr8 18250004 18250214 + 8.60 0.000 Intergenic Intergenic 28441 NM_001160174 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr14-2565 chr14 36297972 36298182 + 8.60 0.000 TTS (NM_016586) TTS (NM_016586) 22560 NM_001308110 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr5-8117 chr5 98389009 98389219 + 8.60 0.000 Intergenic Intergenic -227875 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr7-2454 chr7 150370756 150370966 + 8.60 0.000 5' UTR (NM_013400, exon 3 of 4) 5' UTR (NM_013400, exon 3 of 4) 2039 NM_001362745 29803 Hs.647086 NM_013400 ENSG00000214022 REPIN1 AP4|RIP60|ZNF464|Zfp464 replication initiator 1 protein-coding chr7-5977 chr7 101630719 101630929 + 8.60 0.000 Intergenic Intergenic -1528 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chrX-2858 chrX 141121395 141121605 + 8.60 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -3364 NR_104088 101954278 NR_104088 ENSG00000202337 RNU6-8 U6-8 RNA, U6 small nuclear 8 snRNA chr10-8499 chr10 89913547 89913757 + 8.60 0.000 intron (NR_149079, intron 1 of 1) intron (NR_149079, intron 1 of 1) 25518 NR_149079 105378425 Hs.559891 NR_149079 ENSG00000280560 LINC01374 TCONS_00018278 long intergenic non-protein coding RNA 1374 ncRNA chr22-3810 chr22 30466421 30466631 + 8.60 0.000 intron (NM_174975, intron 6 of 11) intron (NM_174975, intron 6 of 11) 5521 NM_001257382 266629 Hs.505601 NM_174975 ENSG00000100012 SEC14L3 TAP2 SEC14 like lipid binding 3 protein-coding chr15-1782 chr15 77107782 77107992 + 8.60 0.000 3' UTR (NM_024776, exon 8 of 8) 3' UTR (NM_024776, exon 8 of 8) -36778 NM_001168412 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr13-2017 chr13 38771114 38771324 + 8.60 0.000 intron (NM_207361, intron 4 of 23) intron (NM_207361, intron 4 of 23) 56372 NR_146963 100874073 Hs.253994 NR_146963 FREM2-AS1 - FREM2 antisense RNA 1 ncRNA chr5-3330 chr5 133278761 133278971 + 8.60 0.000 intron (NM_015082, intron 6 of 15) MIR3|SINE|MIR 148840 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr7-6788 chr7 25409725 25409935 + 8.60 0.000 Intergenic Intergenic -181344 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr1-7572 chr1 208189610 208189820 + 8.60 0.000 intron (NM_025179, intron 3 of 31) MIRb|SINE|MIR 54669 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr3-8047 chr3 198039632 198039842 + 8.60 0.000 promoter-TSS (NR_046669) promoter-TSS (NR_046669) -270 NR_046669 100873947 Hs.637166 NR_046669 ENSG00000232832 LMLN-AS1 - LMLN antisense RNA 1 ncRNA chr8-5549 chr8 72883589 72883799 + 8.60 0.000 intron (NM_004770, intron 2 of 2) L1ME3Cz|LINE|L1 -125170 NM_017489 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding chr5-3014 chr5 9251502 9251712 + 8.60 0.000 intron (NM_003966, intron 5 of 22) intron (NM_003966, intron 5 of 22) -197712 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr2-11742 chr2 11071771 11071981 + 8.60 0.000 Intergenic (ATAG)n|Simple_repeat|Simple_repeat 60300 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr18-1351 chr18 2239054 2239264 + 8.60 0.000 Intergenic Intergenic 332346 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr2-4555 chr2 54955864 54956074 + 8.60 0.000 intron (NM_001039753, intron 31 of 40) intron (NM_001039753, intron 31 of 40) 54303 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr6-7040 chr6 25843756 25843966 + 8.60 0.000 TTS (NM_001098486) TTS (NM_001098486) -11809 NM_005074 6568 Hs.205816 NM_005074 ENSG00000124568 SLC17A1 NAPI-1|NPT-1|NPT1 solute carrier family 17 member 1 protein-coding chr5-4243 chr5 135303937 135304147 + 8.60 0.000 intron (NR_161235, intron 3 of 5) intron (NR_161235, intron 3 of 5) -55865 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr11-1768 chr11 26332232 26332442 + 8.60 0.000 intron (NM_031418, intron 1 of 26) intron (NM_031418, intron 1 of 26) 207 NM_031418 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr6-1598 chr6 37473377 37473587 + 8.60 0.000 exon (NM_015050, exon 17 of 24) exon (NM_015050, exon 17 of 24) 26411 NM_138493 154467 Hs.284207 NM_138493 ENSG00000198937 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding chr13-1808 chr13 39210432 39210642 + 8.60 0.000 Intergenic L2c|LINE|L2 172081 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr1-15121 chr1 102077126 102077336 + 8.60 0.000 Intergenic Intergenic -79997 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr21-1474 chr21 36693742 36693952 + 8.60 0.000 Intergenic CpG -5268 NM_009586 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 SIM bHLH transcription factor 2 protein-coding chr14-2463 chr14 84175485 84175695 + 8.60 0.000 Intergenic Intergenic -1096342 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr15-4425 chr15 44969087 44969297 + 8.60 0.000 intron (NM_152448, intron 5 of 6) AluSz6|SINE|Alu 12505 NM_152448 145645 Hs.567701 NM_152448 ENSG00000167014 TERB2 C15orf43 telomere repeat binding bouquet formation protein 2 protein-coding chr11-3629 chr11 74074664 74074874 + 8.60 0.000 intron (NM_001286577, intron 23 of 32) intron (NM_001286577, intron 23 of 32) -65532 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr11-1899 chr11 46886058 46886268 + 8.60 0.000 exon (NM_002334, exon 18 of 38) exon (NM_002334, exon 18 of 38) 32387 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chr12-3226 chr12 57108730 57108940 + 8.60 0.000 intron (NR_033659, intron 1 of 20) intron (NR_033659, intron 1 of 20) 1454 NM_001178079 6778 Hs.524518 NM_003153 ENSG00000166888 STAT6 D12S1644|IL-4-STAT|STAT6B|STAT6C signal transducer and activator of transcription 6 protein-coding chr7-5892 chr7 94432228 94432438 + 8.60 0.000 Intergenic Intergenic 37772 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr11-4385 chr11 76736182 76736392 + 8.60 0.000 Intergenic Intergenic -14498 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr8-1967 chr8 67980025 67980235 + 8.60 0.000 intron (NM_024870, intron 1 of 39) L2c|LINE|L2 28084 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr10-5849 chr10 113855600 113855810 + 8.60 0.000 intron (NM_198514, intron 1 of 10) AluSz|SINE|Alu 1044 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding chr5-2579 chr5 61255253 61255463 + 8.60 0.000 intron (NR_146624, intron 1 of 2) intron (NR_146624, intron 1 of 2) 9571 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr1-15937 chr1 187731169 187731379 + 8.60 0.000 Intergenic L2a|LINE|L2 287646 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chrX-1196 chrX 68686402 68686612 + 8.60 0.000 intron (NM_014725, intron 2 of 13) CpG -7132 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr1-14510 chr1 50569492 50569702 + 8.60 0.000 intron (NM_007051, intron 12 of 18) intron (NM_007051, intron 12 of 18) -146154 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr7-8851 chr7 88343451 88343661 + 8.60 0.000 Intergenic Intergenic -36662 NM_024636 79689 Hs.521008 NM_024636 ENSG00000127954 STEAP4 STAMP2|SchLAH|TIARP|TNFAIP9 STEAP4 metalloreductase protein-coding chr2-5515 chr2 149193364 149193574 + 8.60 0.000 intron (NM_001317002, intron 4 of 7) intron (NM_001317002, intron 4 of 7) 75295 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr19-3166 chr19 39382329 39382539 + 8.60 0.000 intron (NM_018028, intron 14 of 15) intron (NM_018028, intron 14 of 15) 8672 NM_019088 54623 Hs.466714 NM_019088 ENSG00000006712 PAF1 F23149_1|PD2 PAF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr12-8055 chr12 115799780 115799990 + 8.60 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 348769 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr10-2250 chr10 101768971 101769181 + 8.60 0.000 Intergenic Intergenic 7038 NM_033163 2253 Hs.57710 NM_006119 ENSG00000107831 FGF8 AIGF|FGF-8|HBGF-8|HH6|KAL6 fibroblast growth factor 8 protein-coding chr22-3944 chr22 37228461 37228671 + 8.60 0.000 intron (NM_002872, intron 5 of 6) intron (NM_002872, intron 5 of 6) 15703 NM_002872 5880 Hs.517601 NM_002872 ENSG00000128340 RAC2 EN-7|Gx|HSPC022|p21-Rac2 Rac family small GTPase 2 protein-coding chr4-6266 chr4 76378285 76378495 + 8.60 0.000 intron (NM_001042784, intron 8 of 23) intron (NM_001042784, intron 8 of 23) 28915 NM_001042784 339965 Hs.529680 NM_178555 ENSG00000163749 CCDC158 - coiled-coil domain containing 158 protein-coding chr8-6826 chr8 97447661 97447871 + 8.60 0.000 Intergenic MamRep38|DNA|hAT -1269 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr2-11982 chr2 27267285 27267495 + 8.60 0.000 intron (NM_001318949, intron 1 of 8) L2a|LINE|L2 -4343 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr6-6376 chr6 71880745 71880955 + 8.60 0.000 Intergenic L2a|LINE|L2 -5853 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr6-7713 chr6 88599128 88599338 + 8.60 0.000 Intergenic Intergenic -59864 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr2-8265 chr2 100678051 100678261 + 8.60 0.000 Intergenic MIRb|SINE|MIR 74417 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr10-3882 chr10 50622073 50622283 + 8.60 0.000 intron (NM_147156, intron 1 of 10) AmnSINE1|SINE|5S-Deu-L2 1778 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr5-1380 chr5 100224143 100224353 + 8.60 0.000 Intergenic L2a|LINE|L2 164006 NR_027503 100133050 Hs.534796 NR_027503 LOC100133050 - glucuronidase beta pseudogene pseudo chrX-5369 chrX 150326328 150326538 + 8.60 0.000 Intergenic Intergenic -36884 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chrX-1560 chrX 50399152 50399362 + 8.60 0.000 intron (NM_001013742, intron 8 of 27) (TG)n|Simple_repeat|Simple_repeat 71568 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr4-5881 chr4 128053249 128053459 + 8.60 0.000 Intergenic MLT2A2|LTR|ERVL -7958 NM_178043 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr3-2509 chr3 4899032 4899242 + 8.60 0.000 intron (NR_037903, intron 2 of 2) intron (NR_037903, intron 2 of 2) 7364 NR_125914 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr2-14031 chr2 192982140 192982350 + 8.60 0.000 Intergenic Intergenic 232400 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr18-1600 chr18 41610276 41610486 + 8.60 0.000 Intergenic Intergenic -89704 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr5-4979 chr5 80220600 80220810 + 8.60 0.000 intron (NR_126061, intron 1 of 13) intron (NR_126061, intron 1 of 13) 35343 NM_178276 256987 Hs.288232 NM_178276 ENSG00000164300 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding chrX-4027 chrX 17339120 17339330 + 8.60 0.000 Intergenic Intergenic -35975 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr2-9640 chr2 18604418 18604628 + 8.60 0.000 Intergenic Intergenic -14943 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr7-9714 chr7 155941120 155941330 + 8.60 0.000 Intergenic Intergenic -19994 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr17-6204 chr17 4881440 4881650 + 8.60 0.000 intron (NM_015716, intron 4 of 30) intron (NM_015716, intron 4 of 30) -17991 NM_001145536 100130311 Hs.579243 NM_001145536 ENSG00000205710 C17orf107 - chromosome 17 open reading frame 107 protein-coding chr2-6037 chr2 114002829 114003039 + 8.60 0.000 intron (NR_148508, intron 1 of 1) MSTB1|LTR|ERVL-MaLR -22950 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr20-1997 chr20 49990491 49990701 + 8.60 0.000 Intergenic L2c|LINE|L2 7616 NM_005985 6615 Hs.48029 NM_005985 ENSG00000124216 SNAI1 SLUGH2|SNA|SNAH|SNAIL|SNAIL1|dJ710H13.1 snail family transcriptional repressor 1 protein-coding chr18-2440 chr18 27306102 27306312 + 8.60 0.000 Intergenic Intergenic 36449 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr12-8191 chr12 122788369 122788579 + 8.60 0.000 intron (NR_027918, intron 4 of 12) MIR|SINE|MIR 13902 NM_201435 84660 Hs.592008 NM_032573 ENSG00000130783 CCDC62 CT109|ERAP75|TSP-NY coiled-coil domain containing 62 protein-coding chr12-2889 chr12 43306108 43306318 + 8.60 0.000 Intergenic Intergenic 150898 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr22-2314 chr22 38333890 38334100 + 8.60 0.000 intron (NM_001289912, intron 5 of 14) intron (NM_001289912, intron 5 of 14) -15911 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr1-2876 chr1 211258380 211258590 + 8.60 0.000 promoter-TSS (NM_001136225) promoter-TSS (NM_001136225) -792 NM_001350069 55758 Hs.356399 NM_018254 ENSG00000117625 RCOR3 - REST corepressor 3 protein-coding chr8-5718 chr8 131845445 131845655 + 8.60 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -58543 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr14-4407 chr14 30779464 30779674 + 8.60 0.000 Intergenic Intergenic -94966 NM_001347720 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr2-14445 chr2 223009141 223009351 + 8.60 0.000 Intergenic Intergenic -42684 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr10-2936 chr10 17244830 17245040 + 8.60 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -14950 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr1-13249 chr1 220391817 220392027 + 8.60 0.000 Intergenic Intergenic -119469 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr20-3153 chr20 38810706 38810916 + 8.60 0.000 intron (NM_015568, intron 1 of 10) MIR|SINE|MIR 5114 NM_001172735 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr1-7816 chr1 57468819 57469029 + 8.60 0.000 intron (NM_001353980, intron 4 of 5) L2c|LINE|L2 -44003 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr2-7589 chr2 25481605 25481815 + 8.60 0.000 intron (NM_001351395, intron 10 of 20) intron (NM_001351395, intron 10 of 20) -139120 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chrX-5179 chrX 133309847 133310057 + 8.60 0.000 intron (NM_001448, intron 4 of 8) intron (NM_001448, intron 4 of 8) -91598 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr8-5485 chr8 51197385 51197595 + 8.60 0.000 Intergenic L1MC3|LINE|L1 611955 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr6-3730 chr6 4353164 4353374 + 8.60 0.000 Intergenic Intergenic -135529 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr17-5400 chr17 33460180 33460390 + 8.60 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 73475 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr18-1469 chr18 58045043 58045253 + 8.60 0.000 intron (NM_001243960, intron 1 of 28) CpG 922 NM_001144967 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr2-4802 chr2 45391994 45392204 + 8.60 0.000 intron (NM_018079, intron 20 of 20) intron (NM_018079, intron 20 of 20) -137158 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr14-4835 chr14 69300958 69301168 + 8.60 0.000 intron (NM_020692, intron 1 of 15) intron (NM_020692, intron 1 of 15) 40905 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr6-2035 chr6 56984483 56984693 + 8.60 0.000 intron (NM_001318539, intron 2 of 3) MLT1J-int|LTR|ERVL-MaLR 29481 NM_152731 221336 Hs.582993 NM_152731 ENSG00000151917 BEND6 C6orf65 BEN domain containing 6 protein-coding chr3-8196 chr3 42192854 42193064 + 8.60 0.000 intron (NM_001349247, intron 7 of 16) intron (NM_001349247, intron 7 of 16) 32766 NM_014965 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr1-16322 chr1 217130270 217130480 + 8.60 0.000 intron (NM_001134285, intron 1 of 8) AluJr|SINE|Alu 7327 NM_001243511 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr19-2750 chr19 40559476 40559686 + 8.60 0.000 intron (NM_025213, intron 9 of 9) AluJb|SINE|Alu -17292 NM_138392 92799 Hs.26506 NM_138392 ENSG00000160410 SHKBP1 PP203|Sb1 SH3KBP1 binding protein 1 protein-coding chr3-6877 chr3 152982769 152982979 + 8.60 0.000 Intergenic L1PA5|LINE|L1 147743 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr8-1915 chr8 37899183 37899393 + 8.60 0.000 exon (NM_025151, exon 1 of 5) exon (NM_025151, exon 1 of 5) 209 NM_001002814 80223 Hs.191179 NM_025151 ENSG00000156675 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 protein-coding chr6-2422 chr6 157815076 157815286 + 8.60 0.000 Intergenic Intergenic -8065 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr22-2656 chr22 36127127 36127337 + 8.60 0.000 Intergenic AluJb|SINE|Alu 33523 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr5-7624 chr5 45872888 45873098 + 8.60 0.000 Intergenic MER5A|DNA|hAT-Charlie -176613 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr1-15075 chr1 96519841 96520051 + 8.60 0.000 Intergenic Intergenic -145821 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr18-2722 chr18 69078587 69078797 + 8.60 0.000 Intergenic L1MC1|LINE|L1 280612 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr6-3990 chr6 113529182 113529392 + 8.60 0.000 Intergenic Intergenic -95840 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr9-8123 chr9 100197782 100197992 + 8.60 0.000 intron (NR_134606, intron 3 of 16) MER21A|LTR|ERVL 98644 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding chr6-3250 chr6 148107648 148107858 + 8.60 0.000 Intergenic Intergenic -164575 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr14-5404 chr14 104206267 104206477 + 8.60 0.000 Intergenic Intergenic -17212 NR_146613 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr12-3874 chr12 111823339 111823549 + 8.60 0.000 Intergenic HERVK3-int|LTR|ERVK 18486 NR_152608 51275 Hs.333120 NR_015404 ENSG00000234608 MAPKAPK5-AS1 C12orf47 MAPKAPK5 antisense RNA 1 ncRNA chr14-3619 chr14 56351828 56352038 + 8.60 0.000 Intergenic LTR67B|LTR|ERVL -162398 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr6-3942 chr6 86234808 86235018 + 8.60 0.000 Intergenic L1MA4A|LINE|L1 -556180 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr9-1592 chr9 96726526 96726736 + 8.60 0.000 non-coding (NR_026792, exon 1 of 1) non-coding (NR_026792, exon 1 of 1) 810 NR_026792 441455 Hs.229613 NR_026792 LOC441455 - makorin ring finger protein 1 pseudogene pseudo chr22-2511 chr22 23131088 23131298 + 8.60 0.000 intron (NM_014433, intron 4 of 6) L1ME3Cz|LINE|L1 10797 NM_014433 27156 Hs.526920 NM_014433 ENSG00000100218 RSPH14 RTDR1 radial spoke head 14 homolog protein-coding chr12-3313 chr12 80937863 80938073 + 8.60 0.000 promoter-TSS (NM_001324423) promoter-TSS (NM_001324423) -53 NM_004664 8825 Hs.144333 NM_004664 ENSG00000111052 LIN7A LIN-7A|LIN7|MALS-1|MALS1|TIP-33|VELI1 lin-7 homolog A, crumbs cell polarity complex component protein-coding chr11-6165 chr11 44404851 44405061 + 8.60 0.000 Intergenic L1ME3F|LINE|L1 -94817 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr17-7622 chr17 27965423 27965633 + 8.60 0.000 intron (NR_146896, intron 2 of 4) intron (NR_146896, intron 2 of 4) 26179 NR_146896 105371708 Hs.385535 NR_146896 LINC01992 - long intergenic non-protein coding RNA 1992 ncRNA chr9-4760 chr9 132666277 132666487 + 8.60 0.000 intron (NR_136309, intron 1 of 18) intron (NR_136309, intron 1 of 18) -2965 NM_001322342 64794 Hs.660767 NM_022779 ENSG00000125485 DDX31 PPP1R25 DEAD-box helicase 31 protein-coding chr2-13367 chr2 136396849 136397059 + 8.60 0.000 Intergenic MER5B|DNA|hAT-Charlie -278799 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr10-5321 chr10 71061882 71062092 + 8.60 0.000 Intergenic Intergenic 122934 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr3-7569 chr3 40430 40640 + 8.60 0.000 Intergenic MER34A1|LTR|ERV1 28784 NR_110824 102723448 Hs.543290 NR_110824 LINC01986 - long intergenic non-protein coding RNA 1986 ncRNA chr11-5541 chr11 94834988 94835198 + 8.60 0.000 intron (NM_130847, intron 6 of 12) intron (NM_130847, intron 6 of 12) 66737 NM_001301007 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr6-2202 chr6 39219561 39219771 + 8.60 0.000 intron (NM_003740, intron 1 of 4) intron (NM_003740, intron 1 of 4) 9809 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding chr21-1595 chr21 16079906 16080116 + 8.60 0.000 intron (NR_111005, intron 1 of 6) intron (NR_111005, intron 1 of 6) 8897 NR_111005 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr7-6361 chr7 150504901 150505111 + 8.60 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -9866 NM_153236 168537 Hs.647074 NM_153236 ENSG00000179144 GIMAP7 IAN7|hIAN7 GTPase, IMAP family member 7 protein-coding chr20-1876 chr20 44597963 44598173 + 8.60 0.000 intron (NM_007066, intron 2 of 3) MLT1F1|LTR|ERVL-MaLR 15489 NM_001281445 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr2-12680 chr2 75582817 75583027 + 8.60 0.000 Intergenic L1MA3|LINE|L1 -13203 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr3-3661 chr3 131503007 131503217 + 8.60 0.000 promoter-TSS (NM_007208) promoter-TSS (NM_007208) -141 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr21-1867 chr21 42423215 42423425 + 8.60 0.000 intron (NM_018961, intron 7 of 14) MIR3|SINE|MIR 19418 NM_001001895 53347 Hs.473912 NM_018961 ENSG00000160185 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding chr1-2481 chr1 103525359 103525569 + 8.60 0.000 promoter-TSS (NM_001286997) promoter-TSS (NM_001286997) 47 NM_001286997 101928436 Hs.558999 NM_001286997 LOC101928436 - uncharacterized LOC101928436 protein-coding chr3-4571 chr3 172418103 172418313 + 8.60 0.000 Intergenic AluYj4|SINE|Alu 30248 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr6-6395 chr6 80930254 80930464 + 8.60 0.000 Intergenic LTR40A1|LTR|ERVL 822322 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr16-3340 chr16 5237944 5238154 + 8.60 0.000 Intergenic ERVL-B4-int|LTR|ERVL -140229 NM_001289029 196483 Hs.406461 NM_201400 ENSG00000118894 EEF2KMT EFM3|FAM86A|SB153|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding chr2-6915 chr2 106074076 106074286 + 8.60 0.000 intron (NM_032411, intron 3 of 3) intron (NM_032411, intron 3 of 3) 8493 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding chr3-9992 chr3 99577157 99577367 + 8.60 0.000 Intergenic Intergenic -61332 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr9-4892 chr9 6187133 6187343 + 8.60 0.000 Intergenic MIRb|SINE|MIR -27911 NM_001314047 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr6-4731 chr6 65097318 65097528 + 8.60 0.000 intron (NM_001292009, intron 12 of 43) L1MB1|LINE|L1 -203995 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr14-3169 chr14 69804389 69804599 + 8.60 0.000 Intergenic AluSc|SINE|Alu -7253 NM_003049 6554 Hs.952 NM_003049 ENSG00000100652 SLC10A1 NTCP solute carrier family 10 member 1 protein-coding chr2-6983 chr2 134398326 134398536 + 8.60 0.000 intron (NM_001371457, intron 11 of 16) intron (NM_001371457, intron 11 of 16) 144359 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chrX-2222 chrX 43108734 43108944 + 8.60 0.000 Intergenic Intergenic -68155 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr13-3375 chr13 80688574 80688784 + 8.60 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -329712 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA chr16-4971 chr16 2704493 2704703 + 8.60 0.000 intron (NM_018992, intron 5 of 5) MER77B|LTR|ERVL 15626 NM_001318395 83886 Hs.332878 NM_031948 ENSG00000172382 PRSS27 CAPH2|MPN serine protease 27 protein-coding chr5-5984 chr5 127615806 127616016 + 8.60 0.000 Intergenic Intergenic -33110 NM_001048252 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding chr6-4193 chr6 3013688 3013898 + 8.60 0.000 intron (NM_001290222, intron 4 of 5) MLT1O|LTR|ERVL-MaLR 10097 NR_033884 401233 Hs.441039 NM_001013680 HTATSF1P2 - HIV-1 Tat specific factor 1 pseudogene 2 pseudo chr17-4206 chr17 31448456 31448666 + 8.60 0.000 intron (NM_032932, intron 3 of 14) intron (NM_032932, intron 3 of 14) -39547 NM_001346748 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr1-15065 chr1 95751096 95751306 + 8.60 0.000 Intergenic MSTB|LTR|ERVL-MaLR -240867 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr7-3941 chr7 129790176 129790386 + 8.60 0.000 Intergenic L1M5|LINE|L1 -15267 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr7-6379 chr7 151406370 151406580 + 8.60 0.000 intron (NM_001284261, intron 1 of 4) intron (NM_001284261, intron 1 of 4) -2686 NR_034013 100131176 Hs.659231 NR_034012 ENSG00000243836 WDR86-AS1 - WDR86 antisense RNA 1 ncRNA chr6-6536 chr6 131059699 131059909 + 8.60 0.000 intron (NM_001135554, intron 1 of 14) intron (NM_001135554, intron 1 of 14) 3441 NM_001431 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr11-6684 chr11 76919849 76920059 + 8.60 0.000 intron (NM_001300953, intron 1 of 9) LTR41|LTR|ERVL 59036 NM_001300954 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr5-2440 chr5 128174976 128175186 + 8.60 0.000 intron (NM_001256461, intron 20 of 25) intron (NM_001256461, intron 20 of 25) 91315 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr12-3974 chr12 15256824 15257034 + 8.60 0.000 Intergenic Intergenic -35512 NM_001190726 85004 Hs.199487 NM_032918 ENSG00000134533 RERG - RAS like estrogen regulated growth inhibitor protein-coding chr1-12922 chr1 117821370 117821580 + 8.60 0.000 Intergenic HERVL18-int|LTR|ERVL 108146 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr13-1930 chr13 79307317 79307527 + 8.60 0.000 Intergenic Intergenic 98799 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr12-7180 chr12 49338363 49338573 + 8.60 0.000 Intergenic Intergenic -1280 NM_001008223 338761 Hs.380386 NM_001008223 ENSG00000186897 C1QL4 C1QTNF11|CTRP11 complement C1q like 4 protein-coding chr17-4174 chr17 4587969 4588179 + 8.60 0.000 intron (NM_001114974, intron 1 of 7) intron (NM_001114974, intron 1 of 7) 3545 NM_001114974 342527 Hs.441709 NM_198501 ENSG00000188176 SMTNL2 - smoothelin like 2 protein-coding chr9-3536 chr9 35863917 35864127 + 8.60 0.000 3' UTR (NM_001042590, exon 13 of 13) 3' UTR (NM_001042590, exon 13 of 13) 6379 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chr11-8354 chr11 80419019 80419229 + 8.60 0.000 Intergenic Intergenic 343679 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr1-12559 chr1 29483767 29483977 + 8.60 0.000 Intergenic L3|LINE|CR1 -133758 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr6-5137 chr6 123644576 123644786 + 8.60 0.000 Intergenic MER117|DNA|hAT-Charlie -7588 NM_001256022 10345 Hs.144744 NM_006073 ENSG00000186439 TRDN CPVT5|TDN|TRISK triadin protein-coding chr7-7885 chr7 6193571 6193781 + 8.60 0.000 intron (NM_001367581, intron 1 of 13) HAL1|LINE|L1 -21539 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr5-5520 chr5 143792490 143792700 + 8.60 0.000 Intergenic Intergenic -19566 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr4-4158 chr4 8167435 8167645 + 8.60 0.000 Intergenic L2c|LINE|L2 -8727 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr19-3990 chr19 1707592 1707802 + 8.60 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -45809 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr12-3965 chr12 11885373 11885583 + 8.60 0.000 intron (NM_001987, intron 6 of 7) intron (NM_001987, intron 6 of 7) -164383 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr17-4866 chr17 64792137 64792347 + 8.60 0.000 intron (NR_024386, intron 8 of 10) (TGTGTA)n|Simple_repeat|Simple_repeat -10243 NR_026899 109286553 Hs.117853 NR_026899 ENSG00000215769 ARHGAP27P1-BPTFP1-KPNA2P3 - ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene pseudo chrX-4308 chrX 44334058 44334268 + 8.60 0.000 intron (NM_025184, intron 1 of 14) intron (NM_025184, intron 1 of 14) 9509 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr3-10608 chr3 145108538 145108748 + 8.60 0.000 Intergenic L1MC1|LINE|L1 960542 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr12-4195 chr12 96501665 96501875 + 8.60 0.000 intron (NM_001306084, intron 2 of 67) intron (NM_001306084, intron 2 of 67) 12193 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr8-2883 chr8 141582830 141583040 + 8.60 0.000 Intergenic MIR3|SINE|MIR -75705 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr1-11712 chr1 9510668 9510878 + 8.60 0.000 Intergenic AluJb|SINE|Alu -28692 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr20-2346 chr20 14081204 14081414 + 8.60 0.000 intron (NM_001351663, intron 2 of 17) MER31B|LTR|ERV1 85793 NM_001351661 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr8-2946 chr8 37516912 37517122 + 8.60 0.000 intron (NR_121621, intron 1 of 2) intron (NR_121621, intron 1 of 2) 4369 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr1-11323 chr1 22514309 22514519 + 8.60 0.000 intron (NM_001083621, intron 13 of 18) L2a|LINE|L2 -49075 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr2-5506 chr2 146982758 146982968 + 8.60 0.000 Intergenic AluJr|SINE|Alu 395806 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-5510 chr2 147596907 147597117 + 8.60 0.000 Intergenic Intergenic -247505 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr3-6320 chr3 78470581 78470791 + 8.60 0.000 Intergenic MER39|LTR|ERV1 -421723 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr18-1901 chr18 31529635 31529845 + 8.60 0.000 intron (NM_001943, intron 8 of 14) intron (NM_001943, intron 8 of 14) 27171 NR_045216 100652770 Hs.562766 NR_045216 ENSG00000264859 DSG2-AS1 - DSG2 antisense RNA 1 ncRNA chr5-5122 chr5 102715479 102715689 + 8.60 0.000 Intergenic Intergenic -39199 NM_001319943 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr3-7335 chr3 44288945 44289155 + 8.60 0.000 intron (NM_001145030, intron 11 of 19) intron (NM_001145030, intron 11 of 19) 47164 NM_001145030 375337 Hs.132125 NM_001145030 ENSG00000173769 TOPAZ1 C3orf77 testis and ovary specific PAZ domain containing 1 protein-coding chr15-2985 chr15 52349206 52349416 + 8.60 0.000 intron (NM_001142495, intron 28 of 39) intron (NM_001142495, intron 28 of 39) -53507 NM_018728 55930 Hs.487036 NM_018728 ENSG00000128833 MYO5C - myosin VC protein-coding chr17-4031 chr17 76687495 76687705 + 8.60 0.000 intron (NM_198530, intron 2 of 3) intron (NM_198530, intron 2 of 3) 1063 NM_001363769 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr3-7752 chr3 61874737 61874947 + 8.60 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 313271 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr3-3877 chr3 39278650 39278860 + 8.60 0.000 intron (NM_001171174, intron 1 of 1) intron (NM_001171174, intron 1 of 1) 1281 NM_001337 1524 Hs.78913 NM_001337 ENSG00000168329 CX3CR1 CCRL1|CMKBRL1|CMKDR1|GPR13|GPRV28|V28 C-X3-C motif chemokine receptor 1 protein-coding chr1-11848 chr1 36097086 36097296 + 8.60 0.000 3' UTR (NM_001294347, exon 4 of 4) 3' UTR (NM_001294347, exon 4 of 4) 8299 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr8-7166 chr8 123374924 123375134 + 8.60 0.000 intron (NM_014109, intron 2 of 27) intron (NM_014109, intron 2 of 27) 21418 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr16-2220 chr16 87658681 87658891 + 8.60 0.000 intron (NM_020655, intron 2 of 4) intron (NM_020655, intron 2 of 4) 56278 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr5-3834 chr5 112194337 112194547 + 8.60 0.000 intron (NM_001347887, intron 17 of 23) intron (NM_001347887, intron 17 of 23) 32957 NR_002922 654322 Hs.689709 NR_002922 ENSG00000238363 SNORA13 ACA13 small nucleolar RNA, H/ACA box 13 snoRNA chr19-3815 chr19 7727389 7727599 + 8.60 0.000 Intergenic THE1B|LTR|ERVL-MaLR 4677 NM_001244856 339390 Hs.220649 NM_198492 ENSG00000182566 CLEC4G DTTR431|LP2698|LSECtin|UNQ431 C-type lectin domain family 4 member G protein-coding chr11-8485 chr11 118666413 118666623 + 8.60 0.000 intron (NM_007180, intron 1 of 14) MER21-int|LTR|ERVL 13132 NM_001301065 11181 Hs.129712 NM_007180 ENSG00000118094 TREH TRE|TREA|TREHD trehalase protein-coding chr3-3576 chr3 53995819 53996029 + 8.60 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -104065 NM_021237 58515 Hs.58471 NM_021237 ENSG00000113811 SELENOK HSPC030|HSPC297|SELK selenoprotein K protein-coding chr13-1915 chr13 59745489 59745699 + 8.60 0.000 intron (NM_001258366, intron 26 of 26) intron (NM_001258366, intron 26 of 26) -267124 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr6-8229 chr6 136499349 136499559 + 8.60 0.000 intron (NM_001198617, intron 1 of 15) MIRb|SINE|MIR 26759 NM_001198609 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr2-7565 chr2 24432838 24433048 + 8.60 0.000 Intergenic MIRc|SINE|MIR -58311 NM_003743 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr1-6631 chr1 43936790 43937000 + 8.60 0.000 3' UTR (NM_057090, exon 5 of 5) 3' UTR (NM_057090, exon 5 of 5) 3094 NM_057091 9048 Hs.632404 NM_003976 ENSG00000117407 ARTN ART|ENOVIN|EVN|NBN artemin protein-coding chr5-5200 chr5 112872735 112872945 + 8.60 0.000 intron (NM_001204199, intron 4 of 4) HAL1|LINE|L1 11553 NM_001204199 6728 Hs.637001 NM_003135 ENSG00000153037 SRP19 - signal recognition particle 19 protein-coding chr7-8182 chr7 30977635 30977845 + 8.60 0.000 intron (NM_000823, intron 12 of 12) intron (NM_000823, intron 12 of 12) 13787 NM_000823 2692 Hs.767 NM_000823 ENSG00000106128 GHRHR GHRFR|GRFR|IGHD1B|IGHD4 growth hormone releasing hormone receptor protein-coding chr11-7526 chr11 10768489 10768699 + 8.60 0.000 intron (NM_014633, intron 16 of 24) intron (NM_014633, intron 16 of 24) 17348 NM_001346279 9646 Hs.725151 NM_014633 ENSG00000198730 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding chr8-1709 chr8 122727861 122728071 + 8.60 0.000 Intergenic Intergenic -33860 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr12-6983 chr12 29704852 29705062 + 8.60 0.000 intron (NM_001367875, intron 5 of 19) L3|LINE|CR1 78985 NM_001193451 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr2-7881 chr2 53880883 53881093 + 8.60 0.000 intron (NM_014614, intron 41 of 46) intron (NM_014614, intron 41 of 46) -20955 NM_001164165 100302652 Hs.40763 NM_001164165 ENSG00000270898 GPR75-ASB3 ASB-3|ASB3 GPR75-ASB3 readthrough protein-coding chr1-12045 chr1 113128764 113128974 + 8.60 0.000 3' UTR (NM_001312686, exon 19 of 19) 3' UTR (NM_001312686, exon 19 of 19) 55671 NM_001312686 9860 Hs.448972 NM_014813 ENSG00000198799 LRIG2 LIG-2|LIG2|UFS2 leucine rich repeats and immunoglobulin like domains 2 protein-coding chr2-4544 chr2 46098724 46098934 + 8.60 0.000 intron (NM_005400, intron 11 of 14) intron (NM_005400, intron 11 of 14) -198578 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chrX-696 chrX 63503609 63503819 + 8.60 0.000 intron (NR_152612, intron 1 of 2) MLT1D|LTR|ERVL-MaLR 57381 NR_015353 92249 Hs.31532 NR_015353 ENSG00000235437 LINC01278 - long intergenic non-protein coding RNA 1278 ncRNA chr14-1382 chr14 41323016 41323226 + 8.60 0.000 Intergenic MER21-int|LTR|ERVL -283735 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-5829 chr1 226549612 226549822 + 8.60 0.000 intron (NM_001003665, intron 1 of 3) intron (NM_001003665, intron 1 of 3) 953 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr13-1376 chr13 98751714 98751924 + 8.60 0.000 intron (NM_005073, intron 1 of 22) intron (NM_005073, intron 1 of 22) 853 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr1-4245 chr1 206746858 206747068 + 8.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -23810 NM_153758 29949 Hs.661017 NM_013371 ENSG00000142224 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding chr15-1394 chr15 40368192 40368402 + 8.60 0.000 exon (NM_033510, exon 8 of 8) exon (NM_033510, exon 8 of 8) 10078 NM_033510 85455 Hs.355645 NM_033510 ENSG00000140323 DISP2 C15orf36|DISPB|HsT16908|LINC00594 dispatched RND transporter family member 2 protein-coding chr1-7956 chr1 184889103 184889313 + 8.60 0.000 intron (NM_052966, intron 4 of 13) intron (NM_052966, intron 4 of 13) 85300 NM_052966 116496 Hs.518662 NM_052966 ENSG00000135842 NIBAN1 C1orf24|FAM129A|GIG39|NIBAN niban apoptosis regulator 1 protein-coding chr7-8173 chr7 30357344 30357554 + 8.60 0.000 intron (NM_147128, intron 3 of 4) L1M5|LINE|L1 -12601 NR_002186 222161 Hs.112423 NR_002186 DKFZP586I1420 - uncharacterized protein DKFZp586I1420 pseudo chr1-15948 chr1 189296661 189296871 + 8.60 0.000 Intergenic L2|LINE|L2 1179244 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr1-4807 chr1 20531011 20531221 + 8.60 0.000 Intergenic Intergenic -21457 NM_207334 163933 Hs.429179 NM_207334 ENSG00000183114 FAM43B - family with sequence similarity 43 member B protein-coding chr17-8060 chr17 51271331 51271541 + 8.60 0.000 intron (NM_016001, intron 4 of 13) AluJr|SINE|Alu 10890 NM_016001 51096 Hs.709327 NM_016001 ENSG00000011260 UTP18 CGI-48|WDR50 UTP18 small subunit processome component protein-coding chr12-4275 chr12 121254630 121254840 + 8.60 0.000 intron (NM_172226, intron 9 of 15) intron (NM_172226, intron 9 of 15) 19850 NM_001270486 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr10-2969 chr10 71042745 71042955 + 8.60 0.000 Intergenic Intergenic 103797 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr8-5975 chr8 21710311 21710521 + 8.60 0.000 intron (NM_001495, intron 4 of 8) intron (NM_001495, intron 4 of 8) 78459 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr1-14954 chr1 87985098 87985308 + 8.60 0.000 Intergenic Intergenic -613548 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr9-4135 chr9 136077464 136077674 + 8.60 0.000 intron (NM_144653, intron 1 of 5) L1M5|LINE|L1 17720 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr12-4663 chr12 47088256 47088466 + 8.60 0.000 intron (NM_138371, intron 1 of 3) intron (NM_138371, intron 1 of 3) -8402 NM_001370299 347902 Hs.121520 NM_181847 ENSG00000139211 AMIGO2 ALI1|AMIGO-2|DEGA adhesion molecule with Ig like domain 2 protein-coding chr16-6492 chr16 58688000 58688210 + 8.60 0.000 Intergenic LTR57|LTR|ERVL -3335 NM_018231 55238 Hs.10499 NM_018231 ENSG00000103042 SLC38A7 SNAT7 solute carrier family 38 member 7 protein-coding chr2-4235 chr2 219298927 219299137 + 8.60 0.000 intron (NM_001199764, intron 12 of 22) intron (NM_001199764, intron 12 of 22) -4832 NR_029688 406944 NR_029688 ENSG00000207647 MIR153-1 MIRN153-1|mir-153-1 microRNA 153-1 ncRNA chr9-7511 chr9 32846301 32846511 + 8.60 0.000 Intergenic Intergenic 62866 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chrX-5073 chrX 124782221 124782431 + 8.60 0.000 intron (NM_014253, intron 3 of 30) intron (NM_014253, intron 3 of 30) 181491 NM_001163279 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr16-4440 chr16 53341154 53341364 + 8.60 0.000 Intergenic HAL1|LINE|L1 29953 NM_001347693 643802 Hs.451336 NM_001207030 LOC643802 - u3 small nucleolar ribonucleoprotein protein MPP10-like protein-coding chr7-7219 chr7 21974992 21975202 + 8.60 0.000 Intergenic HAL1|LINE|L1 -29198 NM_001127370 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr2-6118 chr2 218012023 218012233 + 8.60 0.000 Intergenic Intergenic -22806 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr20-4519 chr20 63622172 63622382 + 8.60 0.000 intron (NM_012384, intron 1 of 9) intron (NM_012384, intron 1 of 9) 4824 NM_012384 26205 Hs.473286 NM_012384 ENSG00000101216 GMEB2 GMEB-2|P79PIF|PIF79 glucocorticoid modulatory element binding protein 2 protein-coding chr20-3111 chr20 31694446 31694656 + 8.60 0.000 intron (NR_134257, intron 1 of 2) intron (NR_134257, intron 1 of 2) -26956 NR_131907 103021294 NR_131907 ENSG00000281376 ABALON INXS apoptotic BCL2L1-antisense long non-coding RNA ncRNA chr12-4629 chr12 42315175 42315385 + 8.60 0.000 intron (NM_033114, intron 5 of 7) intron (NM_033114, intron 5 of 7) 8579 NR_107005 102467003 NR_107005 ENSG00000278520 MIR7851 hsa-mir-7851 microRNA 7851 ncRNA chr4-8172 chr4 130322586 130322796 + 8.60 0.000 Intergenic Intergenic -53670 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr4-2300 chr4 48269360 48269570 + 8.60 0.000 intron (NM_003215, intron 1 of 17) CpG 373 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr1-9355 chr1 28869058 28869268 + 8.60 0.000 3' UTR (NM_000911, exon 3 of 3) 3' UTR (NM_000911, exon 3 of 3) -17928 NM_203342 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chrX-1685 chrX 8176465 8176675 + 8.60 0.000 Intergenic MER84-int|LTR|ERV1 -5303 NM_016378 51480 Hs.279737 NM_016378 ENSG00000177504 VCX2 VCX-2r|VCX2R|VCXB variable charge X-linked 2 protein-coding chr16-5564 chr16 31008272 31008482 + 8.60 0.000 intron (NM_052874, intron 1 of 9) intron (NM_052874, intron 1 of 9) 2261 NM_052874 112755 Hs.542230 NM_052874 ENSG00000099365 STX1B GEFSP9|STX1B1|STX1B2 syntaxin 1B protein-coding chr6-4375 chr6 21797099 21797309 + 8.60 0.000 intron (NR_015410, intron 3 of 11) SVA_D|Retroposon|SVA 130791 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr5-8141 chr5 99845232 99845442 + 8.60 0.000 Intergenic Intergenic 311347 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr3-11181 chr3 192472535 192472745 + 8.60 0.000 intron (NM_004113, intron 2 of 5) intron (NM_004113, intron 2 of 5) -42382 NR_046598 100873987 Hs.628012 NR_046598 ENSG00000230126 FGF12-AS2 - FGF12 antisense RNA 2 ncRNA chr17-6282 chr17 42183985 42184195 + 8.60 0.000 TTS (NM_001524) TTS (NM_001524) 1362 NM_001524 3060 Hs.158348 NM_001524 ENSG00000161610 HCRT NRCLP1|OX|PPOX hypocretin neuropeptide precursor protein-coding chr7-7324 chr7 46185936 46186146 + 8.60 0.000 Intergenic Intergenic -264769 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr3-3637 chr3 114660180 114660390 + 8.60 0.000 intron (NM_001348803, intron 6 of 13) intron (NM_001348803, intron 6 of 13) -35340 NM_001164346 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr3-10272 chr3 124409429 124409639 + 8.60 0.000 intron (NM_001024660, intron 13 of 59) intron (NM_001024660, intron 13 of 59) 35202 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr17-3039 chr17 79351089 79351299 + 8.60 0.000 intron (NM_001082575, intron 2 of 14) L1MB5|LINE|L1 164954 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr3-11009 chr3 180241074 180241284 + 8.60 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -172994 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr3-4144 chr3 123008432 123008642 + 8.60 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) -15264 NM_001256346 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr12-4036 chr12 48548843 48549053 + 8.60 0.000 Intergenic L1PA4|LINE|L1 21098 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr13-2529 chr13 60644388 60644598 + 8.60 0.000 Intergenic Intergenic -28462 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr18-1253 chr18 55343639 55343849 + 8.60 0.000 intron (NM_001243228, intron 8 of 19) intron (NM_001243228, intron 8 of 19) -21903 NM_001243234 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr1-10731 chr1 196991537 196991747 + 8.60 0.000 intron (NM_030787, intron 3 of 9) L1PA6|LINE|L1 14105 NM_030787 81494 Hs.282594 NM_030787 ENSG00000134389 CFHR5 CFHL5|CFHR5D|FHR-5|FHR5 complement factor H related 5 protein-coding chr10-5398 chr10 75217676 75217886 + 8.60 0.000 intron (NM_001184783, intron 6 of 11) intron (NM_001184783, intron 6 of 11) 7627 NM_001324090 7417 Hs.355927 NM_003375 ENSG00000165637 VDAC2 POR voltage dependent anion channel 2 protein-coding chr2-5233 chr2 46779251 46779461 + 8.60 0.000 Intergenic Intergenic -37312 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chrX-1761 chrX 57421322 57421532 + 8.60 0.000 intron (NM_001353840, intron 7 of 9) MLT1B|LTR|ERVL-MaLR 134573 NR_148564 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding chr3-5359 chr3 144865939 144866149 + 8.60 0.000 Intergenic LTR16|LTR|ERVL 892963 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr6-5331 chr6 144951555 144951765 + 8.60 0.000 Intergenic MER4D|LTR|ERV1 546005 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chrX-3619 chrX 86249480 86249690 + 8.60 0.000 intron (NM_001139514, intron 1 of 11) L1PA15|LINE|L1 -13383 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr21-650 chr21 31667692 31667902 + 8.60 0.000 intron (NM_000454, intron 4 of 4) intron (NM_000454, intron 4 of 4) 8175 NM_000454 6647 Hs.443914 NM_000454 ENSG00000142168 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1 protein-coding chr1-15247 chr1 112492918 112493128 + 8.60 0.000 intron (NM_004185, intron 2 of 5) L1MCa|LINE|L1 -15942 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr2-5112 chr2 19510849 19511059 + 8.60 0.000 Intergenic Intergenic -152331 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr6-6366 chr6 66541037 66541247 + 8.60 0.000 Intergenic L1PA6|LINE|L1 753263 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chrX-3728 chrX 119274460 119274670 + 8.60 0.000 Intergenic Intergenic -16964 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr4-1811 chr4 55396300 55396510 + 8.60 0.000 intron (NM_018475, intron 1 of 5) G-rich|Low_complexity|Low_complexity 448 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr7-3970 chr7 134660385 134660595 + 8.60 0.000 intron (NM_199186, intron 2 of 3) intron (NM_199186, intron 2 of 3) 13637 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr1-12113 chr1 160947174 160947384 + 8.60 0.000 intron (NM_080878, intron 7 of 7) LTR5B|LTR|ERVK 7530 NM_080878 142683 Hs.385631 NM_080878 ENSG00000158764 ITLN2 HL-2|HL2 intelectin 2 protein-coding chr10-4989 chr10 31360049 31360259 + 8.60 0.000 intron (NM_001323658, intron 2 of 8) intron (NM_001323658, intron 2 of 8) 38494 NM_001323672 6935 Hs.124503 NM_030751 ENSG00000148516 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding chr9-5505 chr9 104697961 104698171 + 8.60 0.000 Intergenic Intergenic 3644 NM_001004484 286365 Hs.553683 NM_001004484 ENSG00000179055 OR13D1 OR9-15 olfactory receptor family 13 subfamily D member 1 protein-coding chr4-3046 chr4 139502404 139502614 + 8.60 0.000 intron (NM_001306199, intron 7 of 7) L2a|LINE|L2 48388 NM_031296 83452 Hs.591679 NM_031296 ENSG00000172007 RAB33B SMC2 RAB33B, member RAS oncogene family protein-coding chr2-7674 chr2 29575978 29576188 + 8.60 0.000 intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -100706 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr10-1958 chr10 23299872 23300082 + 8.60 0.000 intron (NM_001365862, intron 5 of 15) AluY|SINE|Alu -43980 NR_155752 105376453 NR_155752 LOC105376453 - uncharacterized LOC105376453 ncRNA chr7-2993 chr7 30663277 30663487 + 8.60 0.000 intron (NM_001202481, intron 7 of 13) intron (NM_001202481, intron 7 of 13) 19074 NM_001883 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr5-5232 chr5 117149643 117149853 + 8.60 0.000 Intergenic Intergenic -265764 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr11-8258 chr11 67677047 67677257 + 8.60 0.000 intron (NM_001031615, intron 1 of 9) L1PB1|LINE|L1 -2312 NM_001354345 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr10-4367 chr10 35195364 35195574 + 8.60 0.000 promoter-TSS (NM_001267570) promoter-TSS (NM_001267570) 336 NM_182717 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr6-1626 chr6 88983553 88983763 + 8.60 0.000 Intergenic MIR|SINE|MIR -20040 NM_001286426 8732 Hs.567378 NM_003800 ENSG00000111880 RNGTT CAP1A|HCE|HCE1|hCAP RNA guanylyltransferase and 5'-phosphatase protein-coding chr11-2958 chr11 76046209 76046419 + 8.60 0.000 intron (NM_003369, intron 12 of 14) HAL1|LINE|L1 160188 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr1-9810 chr1 59229310 59229520 + 8.60 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -67398 NM_001350796 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr8-5910 chr8 17662061 17662271 + 8.60 0.000 intron (NR_156437, intron 7 of 13) intron (NR_156437, intron 7 of 13) 14335 NM_001330470 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr1-9737 chr1 54118744 54118954 + 8.60 0.000 Intergenic Intergenic 34332 NM_001353655 200008 NM_201546 ENSG00000157211 CDCP2 - CUB domain containing protein 2 protein-coding chr3-10615 chr3 145552948 145553158 + 8.60 0.000 Intergenic HERVH-int|LTR|ERV1 516132 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr3-3338 chr3 9420943 9421153 + 8.60 0.000 intron (NM_001080517, intron 1 of 22) MIRc|SINE|MIR 23348 NM_001080517 55209 Hs.288164 NM_018187 ENSG00000168137 SETD5 - SET domain containing 5 protein-coding chr3-9170 chr3 34005983 34006193 + 8.60 0.000 Intergenic LTR78|LTR|ERV1 207458 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr5-2523 chr5 159773257 159773467 + 8.60 0.000 Intergenic CpG 98022 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr3-3687 chr3 158421089 158421299 + 8.60 0.000 intron (NM_001271838, intron 6 of 9) L2b|LINE|L2 -105514 NR_148407 110599565 NR_148407 UC.134 - long non-coding RNA uc.134 ncRNA chr1-8328 chr1 53267061 53267271 + 8.60 0.000 intron (NM_004631, intron 8 of 18) intron (NM_004631, intron 8 of 18) 28556 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 - uncharacterized LOC100507564 ncRNA chr16-3520 chr16 26160047 26160257 + 8.60 0.000 Intergenic MIR|SINE|MIR 134915 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr17-4918 chr17 75570476 75570686 + 8.60 0.000 intron (NM_004524, intron 16 of 24) intron (NM_004524, intron 16 of 24) -17477 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr2-13586 chr2 157016647 157016857 + 8.60 0.000 Intergenic L2c|LINE|L2 -240953 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr12-5510 chr12 129614687 129614897 + 8.60 0.000 intron (NM_133448, intron 2 of 8) MER102b|DNA|hAT-Charlie 289233 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr19-5345 chr19 4498435 4498645 + 8.60 0.000 intron (NM_001001520, intron 12 of 15) intron (NM_001001520, intron 12 of 15) 19946 NM_001367868 729359 Hs.591387 NM_001080400 ENSG00000167676 PLIN4 KIAA1881|S3-12 perilipin 4 protein-coding chr4-2294 chr4 25031352 25031562 + 8.60 0.000 promoter-TSS (NM_018176) promoter-TSS (NM_018176) -511 NM_018176 55203 Hs.12488 NM_018176 ENSG00000153012 LGI2 LGIL2 leucine rich repeat LGI family member 2 protein-coding chr12-1520 chr12 69239523 69239733 + 8.60 0.000 promoter-TSS (NM_001300947) promoter-TSS (NM_001300947) 59 NM_007007 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr17-3344 chr17 77117693 77117903 + 8.60 0.000 intron (NM_001204410, intron 2 of 17) intron (NM_001204410, intron 2 of 17) -23171 NM_003003 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr19-2682 chr19 16039170 16039380 + 8.60 0.000 intron (NR_110321, intron 4 of 4) intron (NR_110321, intron 4 of 4) 5155 NR_110321 148231 Hs.631621 NR_024335 ENSG00000167459 LINC00905 - long intergenic non-protein coding RNA 905 ncRNA chr9-4614 chr9 107795888 107796098 + 8.60 0.000 Intergenic THE1D|LTR|ERVL-MaLR -306224 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr12-5042 chr12 88202627 88202837 + 8.60 0.000 Intergenic Intergenic 60425 NR_159381 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding chr4-4802 chr4 104948387 104948597 + 8.60 0.000 Intergenic Intergenic -197383 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr7-8608 chr7 67477657 67477867 + 8.60 0.000 Intergenic L1PA13|LINE|L1 141786 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr2-6400 chr2 127683185 127683395 + 8.60 0.000 Intergenic AluJo|SINE|Alu -1504 NM_001161404 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr12-2461 chr12 56838904 56839114 + 8.60 0.000 Intergenic Intergenic 75685 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr19-6075 chr19 3009223 3009433 + 8.60 0.000 intron (NM_001300846, intron 13 of 19) L3|LINE|CR1 19952 NM_001300846 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr17-4820 chr17 55296058 55296268 + 8.60 0.000 intron (NM_001330375, intron 2 of 3) intron (NM_001330375, intron 2 of 3) 29941 NM_001330375 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr1-6233 chr1 222862355 222862565 + 8.60 0.000 intron (NM_032890, intron 1 of 9) L1MC4a|LINE|L1 47421 NM_032890 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr15-731 chr15 74782017 74782227 + 8.60 0.000 promoter-TSS (NM_001127190) promoter-TSS (NM_001127190) 38 NM_004383 1445 Hs.77793 NM_004383 ENSG00000103653 CSK - C-terminal Src kinase protein-coding chr12-2123 chr12 82295130 82295340 + 8.60 0.000 Intergenic AluSc|SINE|Alu 63152 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr13-3527 chr13 23045552 23045762 + 8.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR -129288 NR_138043 100996930 Hs.380803 NR_138043 LINC00621 - long intergenic non-protein coding RNA 621 ncRNA chr10-4620 chr10 118991942 118992152 + 8.60 0.000 Intergenic MER4A|LTR|ERV1 -37667 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr1-6878 chr1 116662894 116663104 + 8.60 0.000 intron (NM_001007237, intron 2 of 10) intron (NM_001007237, intron 2 of 10) 4734 NM_001007237 3321 Hs.171057 NM_001542 ENSG00000143061 IGSF3 EWI-3|LCDD|V8 immunoglobulin superfamily member 3 protein-coding chr18-2890 chr18 10791311 10791521 + 8.60 0.000 intron (NM_022068, intron 13 of 51) intron (NM_022068, intron 13 of 51) -31767 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr22-4250 chr22 47764960 47765170 + 8.60 0.000 intron (NR_122046, intron 8 of 8) (CA)n|Simple_repeat|Simple_repeat 133391 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA chr11-2950 chr11 74443165 74443375 + 8.60 0.000 Intergenic Intergenic 24285 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 BRGDA6|HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr4-2990 chr4 119490380 119490590 + 8.60 0.000 intron (NR_037630, intron 5 of 8) L2b|LINE|L2 35702 NR_037630 645513 Hs.677546 NR_037630 ENSG00000245958 LOC645513 - septin 7 pseudogene pseudo chr18-2492 chr18 51544041 51544251 + 8.60 0.000 intron (NR_040074, intron 1 of 2) LTR65|LTR|ERV1 152104 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr6-3931 chr6 82690576 82690786 + 8.60 0.000 Intergenic (AACAA)n|Simple_repeat|Simple_repeat 326437 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr17-8569 chr17 80090952 80091162 + 8.60 0.000 TTS (NM_001243342) TTS (NM_001243342) -7771 NR_039607 100616121 NR_039607 ENSG00000265561 MIR1268B - microRNA 1268b ncRNA chr1-10877 chr1 205962018 205962228 + 8.60 0.000 intron (NR_110983, intron 2 of 3) intron (NR_110983, intron 2 of 3) 4198 NR_110982 103021295 Hs.741319 NR_110982 LOC103021295 - uncharacterized LOC103021295 ncRNA chr3-3524 chr3 33912078 33912288 + 8.60 0.000 Intergenic Intergenic 113553 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr10-7747 chr10 32858192 32858402 + 8.60 0.000 intron (NM_001321115, intron 42 of 43) L1M2a|LINE|L1 43175 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr1-11219 chr1 245132182 245132392 + 8.60 0.000 Intergenic Intergenic -22698 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr15-2422 chr15 70099327 70099537 + 8.60 0.000 Intergenic CpG-8376 -1515 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chrX-1630 chrX 119692223 119692433 + 8.60 0.000 intron (NM_145799, intron 1 of 10) intron (NM_145799, intron 1 of 10) 840 NM_145802 23157 Hs.496666 NM_015129 ENSG00000125354 SEPTIN6 SEP2|SEPT2|SEPT6 septin 6 protein-coding chrX-1203 chrX 71155013 71155223 + 8.60 0.000 intron (NM_018977, intron 3 of 6) intron (NM_018977, intron 3 of 6) 10277 NM_001321276 54413 Hs.438877 NM_018977 ENSG00000196338 NLGN3 HNL3 neuroligin 3 protein-coding chr1-11010 chr1 220065904 220066114 + 8.60 0.000 intron (NM_001286150, intron 5 of 7) intron (NM_001286150, intron 5 of 7) -19504 NM_004446 2058 Hs.497788 NM_004446 ENSG00000136628 EPRS EARS|GLUPRORS|HLD15|PARS|PIG32|QARS|QPRS glutamyl-prolyl-tRNA synthetase protein-coding chr19-6736 chr19 38442959 38443169 + 8.60 0.000 intron (NM_001042723, intron 3 of 104) intron (NM_001042723, intron 3 of 104) 9364 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr19-3659 chr19 5162252 5162462 + 8.60 0.000 Intergenic HERV9-int|LTR|ERV1 178455 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr2-8512 chr2 129255406 129255616 + 8.60 0.000 intron (NR_122042, intron 1 of 3) intron (NR_122042, intron 1 of 3) 18380 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr14-4866 chr14 70501585 70501795 + 8.60 0.000 Intergenic L1PA5|LINE|L1 -17934 NR_037933 317760 Hs.188369 NR_037933 ENSG00000259158 ADAM20P1 C14orf55 ADAM metallopeptidase domain 20 pseudogene 1 pseudo chr1-5045 chr1 88883527 88883737 + 8.60 0.000 intron (NM_001514, intron 2 of 6) AluJr|SINE|Alu 7935 NM_001514 2959 Hs.481852 NM_001514 ENSG00000137947 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding chr1-6576 chr1 33918611 33918821 + 8.60 0.000 intron (NM_052896, intron 4 of 69) intron (NM_052896, intron 4 of 69) 49760 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr2-11049 chr2 112600601 112600811 + 8.60 0.000 Intergenic Intergenic 15852 NM_001304354 84269 Hs.375707 NM_032309 ENSG00000125611 CHCHD5 C2orf9|CHTM1|MIC14|MIX14 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding chr7-5818 chr7 83593531 83593741 + 8.60 0.000 intron (NM_012431, intron 1 of 16) L2|LINE|L2 47795 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr8-5052 chr8 27469530 27469740 + 8.60 0.000 intron (NM_001347705, intron 3 of 6) intron (NM_001347705, intron 3 of 6) 9626 NM_001347707 1135 Hs.57718 NM_000742 ENSG00000120903 CHRNA2 - cholinergic receptor nicotinic alpha 2 subunit protein-coding chr10-5075 chr10 43888695 43888905 + 8.60 0.000 intron (NR_038268, intron 4 of 4) intron (NR_038268, intron 4 of 4) -20496 NR_033846 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr6-6608 chr6 147801232 147801442 + 8.60 0.000 Intergenic L2b|LINE|L2 292647 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr3-2019 chr3 46089240 46089450 + 8.60 0.000 Intergenic Intergenic -61862 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr13-3218 chr13 25184247 25184457 + 8.60 0.000 intron (NR_120427, intron 1 of 2) AluJo|SINE|Alu 3020 NR_120427 102723318 Hs.549877 NR_120427 LINC01053 - long intergenic non-protein coding RNA 1053 ncRNA chr20-1819 chr20 63321321 63321531 + 8.60 0.000 intron (NM_020882, intron 26 of 35) intron (NM_020882, intron 26 of 35) 28240 NM_020882 57642 Hs.271285 NM_020882 ENSG00000101203 COL20A1 - collagen type XX alpha 1 chain protein-coding chr2-8310 chr2 105744095 105744305 + 8.60 0.000 promoter-TSS (NM_001004722) promoter-TSS (NM_001004722) -712 NM_003581 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr4-5376 chr4 187668956 187669166 + 8.60 0.000 intron (NR_110436, intron 1 of 2) intron (NR_110436, intron 1 of 2) 3580 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LINC02492 - long intergenic non-protein coding RNA 2492 ncRNA chr19-4975 chr19 45745099 45745309 + 8.60 0.000 exon (NM_001310124, exon 4 of 15) exon (NM_001310124, exon 4 of 15) 11953 NM_001310124 388553 Hs.721835 NM_001310124 ENSG00000237452 BHMG1 HMGDC basic helix-loop-helix and HMG-box containing 1 protein-coding chr16-5066 chr16 73183769 73183979 + 8.60 0.000 Intergenic Intergenic -39427 NM_207385 388289 Hs.371893 NM_207385 C16orf47 - chromosome 16 open reading frame 47 protein-coding chr6-2811 chr6 152402105 152402315 + 8.60 0.000 intron (NM_182961, intron 46 of 145) LTR78|LTR|ERV1 21680 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr13-4185 chr13 89931018 89931228 + 8.60 0.000 Intergenic L1M4b|LINE|L1 188594 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr1-4924 chr1 44002304 44002514 + 8.60 0.000 exon (NM_001261380, exon 7 of 13) exon (NM_001261380, exon 7 of 13) 10562 NM_001349129 149473 Hs.632394 NM_152499 ENSG00000159214 CCDC24 - coiled-coil domain containing 24 protein-coding chr2-3569 chr2 37829471 37829681 + 8.60 0.000 non-coding (NR_110011, exon 1 of 3) non-coding (NR_110011, exon 1 of 3) 135 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr13-3645 chr13 31487920 31488130 + 8.60 0.000 Intergenic L3|LINE|CR1 -251501 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chrX-1271 chrX 107777293 107777503 + 8.60 0.000 promoter-TSS (NM_001348372) promoter-TSS (NM_001348372) -335 NM_001348372 392517 Hs.522750 NM_001348372 ENSG00000170935 NCBP2L dJ820B18.1 nuclear cap binding protein subunit 2 like protein-coding chr14-2605 chr14 55754470 55754680 + 8.60 0.000 Intergenic MER5A|DNA|hAT-Charlie -11670 NR_004844 645683 Hs.663461 NR_004844 ENSG00000177350 RPL13AP3 RPL13A_11_1370 ribosomal protein L13a pseudogene 3 pseudo chr3-3869 chr3 38305988 38306198 + 8.60 0.000 exon (NM_001320033, exon 2 of 11) exon (NM_001320033, exon 2 of 11) 157 NM_004803 9389 Hs.165559 NM_004803 ENSG00000144671 SLC22A14 OCTL2|OCTL4|ORCTL4 solute carrier family 22 member 14 protein-coding chr7-4179 chr7 120675261 120675471 + 8.60 0.000 intron (NM_012281, intron 1 of 5) AluSz6|SINE|Alu 182778 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr8-4103 chr8 69637838 69638048 + 8.60 0.000 intron (NR_156414, intron 18 of 20) Charlie7|DNA|hAT-Charlie 45043 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr3-5926 chr3 43176978 43177188 + 8.60 0.000 Intergenic Intergenic -71004 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chr17-4692 chr17 28703130 28703340 + 8.60 0.000 TTS (NM_001304953) TTS (NM_001304953) 6869 NM_001366303 147011 Hs.207471 NM_152465 ENSG00000167525 PROCA1 - protein interacting with cyclin A1 protein-coding chr11-6611 chr11 73655682 73655892 + 8.60 0.000 intron (NM_001130036, intron 4 of 5) intron (NM_001130036, intron 4 of 5) 6874 NM_001130036 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr17-2943 chr17 57747547 57747757 + 8.60 0.000 Intergenic Intergenic -2353 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr8-2723 chr8 100930226 100930436 + 8.60 0.000 intron (NM_001135700, intron 2 of 5) AluSx4|SINE|Alu 20240 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr13-2439 chr13 47945729 47945939 + 8.60 0.000 intron (NM_003850, intron 10 of 10) MER44D|DNA|TcMar-Tigger -13212 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr8-5717 chr8 131179113 131179323 + 8.60 0.000 Intergenic Intergenic -138309 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr14-2968 chr14 50390699 50390909 + 8.60 0.000 intron (NM_001282236, intron 2 of 8) intron (NM_001282236, intron 2 of 8) 6077 NM_004196 8814 Hs.280881 NM_004196 ENSG00000100490 CDKL1 KKIALRE|P42 cyclin dependent kinase like 1 protein-coding chr4-4312 chr4 29152663 29152873 + 8.60 0.000 Intergenic Intergenic -61524 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr1-4915 chr1 41527113 41527323 + 8.60 0.000 intron (NM_024503, intron 5 of 8) (CACCCT)n|Simple_repeat|Simple_repeat -42535 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr5-6395 chr5 142883228 142883438 + 8.60 0.000 intron (NR_146198, intron 4 of 22) intron (NR_146198, intron 4 of 22) -14423 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chrX-1912 chrX 147960933 147961143 + 8.60 0.000 Intergenic L2c|LINE|L2 -20299 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr3-8083 chr3 12586719 12586929 + 8.60 0.000 intron (NR_148942, intron 13 of 16) intron (NR_148942, intron 13 of 16) 29737 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr2-12824 chr2 94988188 94988398 + 8.60 0.000 Intergenic Intergenic -37362 NM_022438 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr10-5699 chr10 100508874 100509084 + 8.60 0.000 intron (NM_015490, intron 5 of 25) intron (NM_015490, intron 5 of 25) 10882 NM_015490 25956 Hs.18889 NM_015490 ENSG00000075826 SEC31B SEC31B-1|SEC31L2 SEC31 homolog B, COPII coat complex component protein-coding chr12-4607 chr12 39662100 39662310 + 8.60 0.000 intron (NM_001031748, intron 7 of 12) L1MA4A|LINE|L1 36022 NR_135051 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding chr8-5135 chr8 72094244 72094454 + 8.60 0.000 Intergenic Intergenic -18765 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr15-1818 chr15 38129686 38129896 + 8.60 0.000 Intergenic Intergenic -56801 NR_147200 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr1-10489 chr1 164766512 164766722 + 8.60 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 8024 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr20-1865 chr20 35576663 35576873 + 8.60 0.000 intron (NR_119376, intron 32 of 42) intron (NR_119376, intron 32 of 42) 30794 NR_119376 80307 Hs.72222 NR_001442 ENSG00000088340 FER1L4 C20orf124 fer-1 like family member 4 (pseudogene) pseudo chr18-1477 chr18 60855224 60855434 + 8.60 0.000 Intergenic LTR53B|LTR|ERVL -478101 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr2-13594 chr2 157898566 157898776 + 8.60 0.000 Intergenic Intergenic -22341 NM_001111067 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr2-5322 chr2 75155019 75155229 + 8.60 0.000 intron (NM_015727, intron 1 of 3) intron (NM_015727, intron 1 of 3) 44396 NM_001058 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr3-4135 chr3 119715305 119715515 + 8.60 0.000 intron (NM_033364, intron 5 of 17) intron (NM_033364, intron 5 of 17) 12388 NM_001320318 89876 Hs.341906 NM_033364 ENSG00000183833 MAATS1 AAT1|AAT1alpha|C3orf15|CFAP91|CaM-IP2|SPATA26 MYCBP associated and testis expressed 1 protein-coding chr4-3756 chr4 85779353 85779563 + 8.60 0.000 intron (NM_001346093, intron 1 of 6) intron (NM_001346093, intron 1 of 6) 660 NM_001042669 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr19-5237 chr19 42039708 42039918 + 8.60 0.000 intron (NM_002088, intron 11 of 18) AluJo|SINE|Alu 25992 NM_002088 2901 Hs.367799 NM_002088 ENSG00000105737 GRIK5 EAA2|GRIK2|GluK5|KA2 glutamate ionotropic receptor kainate type subunit 5 protein-coding chr15-1963 chr15 38589496 38589706 + 8.60 0.000 Intergenic Intergenic -24787 NM_001128602 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr17-2194 chr17 75514776 75514986 + 8.60 0.000 intron (NM_020753, intron 1 of 19) intron (NM_020753, intron 1 of 19) 656 NM_020753 57513 Hs.274408 NM_020753 ENSG00000177303 CASKIN2 ANKS5B CASK interacting protein 2 protein-coding chr5-5525 chr5 144190269 144190479 + 8.60 0.000 intron (NM_020768, intron 2 of 3) MIR|SINE|MIR -15017 NM_001370487 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr3-10634 chr3 147428520 147428730 + 8.60 0.000 intron (NR_121655, intron 1 of 2) intron (NR_121655, intron 1 of 2) 7298 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr11-4189 chr11 61173703 61173913 + 8.60 0.000 Intergenic Intergenic -12382 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr21-1745 chr21 34743893 34744103 + 8.60 0.000 Intergenic Intergenic -1827 NR_038885 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA chr7-6798 chr7 28167200 28167410 + 8.60 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -13152 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr22-3721 chr22 25527124 25527334 + 8.60 0.000 Intergenic Intergenic -37446 NM_001362778 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr3-6227 chr3 65504454 65504664 + 8.60 0.000 intron (NM_001365904, intron 2 of 24) intron (NM_001365904, intron 2 of 24) -389257 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr1-13547 chr1 7009593 7009803 + 8.60 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 224244 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr11-6944 chr11 111841455 111841665 + 8.60 0.000 intron (NM_001352418, intron 8 of 13) intron (NM_001352418, intron 8 of 13) 29721 NM_001352419 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chr10-3430 chr10 38064081 38064291 + 8.60 0.000 non-coding (NR_136709, exon 6 of 6) non-coding (NR_136709, exon 6 of 6) -30150 NM_001007094 7587 Hs.292575 NM_003421 ENSG00000075407 ZNF37A KOX21|ZNF37 zinc finger protein 37A protein-coding chr7-9426 chr7 133396110 133396320 + 8.60 0.000 intron (NM_021807, intron 7 of 17) intron (NM_021807, intron 7 of 17) 105334 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chr1-5431 chr1 32335120 32335330 + 8.60 0.000 intron (NR_052852, intron 1 of 1) intron (NR_052852, intron 1 of 1) 1008 NM_023009 65108 Hs.75061 NM_023009 ENSG00000175130 MARCKSL1 F52|MACMARCKS|MLP|MLP1|MRP MARCKS like 1 protein-coding chr7-8258 chr7 36538977 36539187 + 8.60 0.000 intron (NM_001177507, intron 15 of 19) intron (NM_001177507, intron 15 of 19) 61038 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr1-3812 chr1 19071078 19071288 + 8.60 0.000 Intergenic L2a|LINE|L2 -114507 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr14-3072 chr14 61912685 61912895 + 8.60 0.000 intron (NM_001367661, intron 2 of 8) intron (NM_001367661, intron 2 of 8) -14905 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr19-7084 chr19 55673496 55673706 + 8.60 0.000 intron (NM_001012478, intron 11 of 11) intron (NM_001012478, intron 11 of 11) -1594 NM_013333 29924 Hs.279953 NM_013333 ENSG00000063245 EPN1 - epsin 1 protein-coding chr10-7934 chr10 52254678 52254888 + 8.60 0.000 intron (NM_001098512, intron 10 of 17) intron (NM_001098512, intron 10 of 17) 59345 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr2-6483 chr2 172397446 172397656 + 8.60 0.000 Intergenic Intergenic -29785 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr13-2119 chr13 90758650 90758860 + 8.60 0.000 Intergenic Intergenic 167842 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr4-8658 chr4 177860417 177860627 + 8.60 0.000 intron (NR_108092, intron 1 of 1) intron (NR_108092, intron 1 of 1) 47414 NR_108093 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr6-4323 chr6 16356093 16356303 + 8.60 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 117611 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr21-441 chr21 36528587 36528797 + 8.60 0.000 intron (NM_001146077, intron 1 of 2) intron (NM_001146077, intron 1 of 2) 14092 NM_001146078 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr2-14408 chr2 221151709 221151919 + 8.60 0.000 Intergenic Intergenic 420490 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr6-8427 chr6 151784664 151784874 + 8.60 0.000 intron (NM_001122742, intron 2 of 9) intron (NM_001122742, intron 2 of 9) -20904 NM_001122741 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr15-1772 chr15 70025489 70025699 + 8.60 0.000 Intergenic L2a|LINE|L2 53874 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr2-9021 chr2 197246400 197246610 + 8.60 0.000 intron (NM_153697, intron 1 of 9) intron (NM_153697, intron 1 of 9) 48514 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr14-1523 chr14 55955660 55955870 + 8.60 0.000 Intergenic Intergenic -159091 NR_026796 645687 Hs.569345 NR_026796 ENSG00000258791 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA chrX-3387 chrX 155029077 155029287 + 8.60 0.000 intron (NM_023934, intron 1 of 4) MLT1G3|LTR|ERVL-MaLR 2338 NM_023934 65991 Hs.356050 NM_023934 ENSG00000165775 FUNDC2 DC44|HCBP6|HCC3|PD03104 FUN14 domain containing 2 protein-coding chr5-6686 chr5 62776940 62777150 + 8.60 0.000 Intergenic Intergenic 198226 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr2-13863 chr2 178298651 178298861 + 8.60 0.000 intron (NM_001201480, intron 2 of 25) L1MB3|LINE|L1 -21486 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr6-1222 chr6 108713891 108714101 + 8.60 0.000 Intergenic Intergenic -37658 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr16-2828 chr16 73798941 73799151 + 8.60 0.000 Intergenic Intergenic 412241 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr11-2352 chr11 102268488 102268698 + 8.60 0.000 Intergenic Intergenic -48891 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr6-8262 chr6 138745487 138745697 + 8.60 0.000 intron (NR_161205, intron 2 of 2) AluJb|SINE|Alu -27928 NM_015439 25901 Hs.412019 NM_015439 ENSG00000024862 CCDC28A C6orf80|CCRL1AP coiled-coil domain containing 28A protein-coding chr3-7298 chr3 13648433 13648643 + 8.60 0.000 Intergenic Intergenic -2183 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr10-2313 chr10 44173518 44173728 + 8.60 0.000 Intergenic Intergenic -119127 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr15-3133 chr15 66561060 66561270 + 8.60 0.000 intron (NM_001278562, intron 4 of 11) intron (NM_001278562, intron 4 of 11) 4332 NM_207338 197021 Hs.680983 NM_207338 ENSG00000188501 LCTL KLG|KLPH lactase like protein-coding chr11-5758 chr11 3342525 3342735 + 8.60 0.000 Intergenic Intergenic 36516 NR_040083 7748 Hs.386294 NM_007152 ENSG00000005801 ZNF195 HRF1|ZNFP104 zinc finger protein 195 protein-coding chr10-6998 chr10 72374260 72374470 + 8.60 0.000 intron (NM_001195519, intron 6 of 6) AluJb|SINE|Alu -19446 NM_001002762 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr7-1064 chr7 4682147 4682357 + 8.60 0.000 promoter-TSS (NM_001037165) promoter-TSS (NM_001037165) -43 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr2-11347 chr2 203875724 203875934 + 8.60 0.000 Intergenic Intergenic 8058 NM_005214 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr10-4162 chr10 89767166 89767376 + 8.60 0.000 intron (NM_016195, intron 29 of 32) L1PA7|LINE|L1 -62222 NR_038382 643529 Hs.618956 NR_038382 ENSG00000232229 LINC00865 - long intergenic non-protein coding RNA 865 ncRNA chr6-4132 chr6 162678340 162678550 + 8.60 0.000 intron (NM_004562, intron 1 of 11) L1ME1|LINE|L1 -48687 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr2-14390 chr2 219664638 219664848 + 8.60 0.000 Intergenic AluSz|SINE|Alu 37113 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr6-1467 chr6 35384152 35384362 + 8.60 0.000 intron (NM_001171819, intron 2 of 6) SVA_D|Retroposon|SVA 41699 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr19-4833 chr19 36364344 36364554 + 8.60 0.000 intron (NM_001297619, intron 2 of 4) LTR53B|LTR|ERVL 14752 NM_001297619 57677 Hs.35524 NM_020917 ENSG00000142065 ZFP14 ZNF531 ZFP14 zinc finger protein protein-coding chr9-5340 chr9 89324313 89324523 + 8.60 0.000 intron (NM_001282689, intron 2 of 16) intron (NM_001282689, intron 2 of 16) 5567 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr9-2404 chr9 134204693 134204903 + 8.60 0.000 Intergenic L2b|LINE|L2 -40234 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr12-5484 chr12 125011493 125011703 + 8.60 0.000 intron (NM_080626, intron 1 of 2) intron (NM_080626, intron 1 of 2) 15825 NR_110375 102659353 Hs.596464 NR_110375 ENSG00000280634 THRIL BRI3BP-AS1|BRI3BPAS1|Linc1992|TCONS_00020260 TNF and HNRNPL related immunoregulatory long non-coding RNA ncRNA chr10-7899 chr10 50139952 50140162 + 8.60 0.000 Intergenic Intergenic 72103 NM_001330102 387680 Hs.365286 NM_018232 ENSG00000099290 WASHC2A FAM21A|FAM21B|bA56A21.1|bA98I6.1 WASH complex subunit 2A protein-coding chr12-7690 chr12 89664301 89664511 + 8.60 0.000 intron (NM_001001323, intron 1 of 21) intron (NM_001001323, intron 1 of 21) 44432 NM_001366532 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr1-6834 chr1 98157774 98157984 + 8.60 0.000 Intergenic Intergenic -52832 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr1-11439 chr1 71323501 71323711 + 8.60 0.000 Intergenic L1PA7|LINE|L1 242282 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr18-2855 chr18 8562288 8562498 + 8.60 0.000 Intergenic Intergenic -47052 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr8-6378 chr8 54011362 54011572 + 8.60 0.000 intron (NM_006756, intron 1 of 9) Kanga1b|DNA|TcMar-Tc2 10981 NM_201437 6917 Hs.491745 NM_006756 ENSG00000187735 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A1 protein-coding chr6-7978 chr6 114268027 114268237 + 8.60 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -205255 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr6-7635 chr6 79844385 79844595 + 8.60 0.000 Intergenic AluJb|SINE|Alu -32244 NR_131786 89758 Hs.288213 NM_001243308 LINC01621 C6orf7 long intergenic non-protein coding RNA 1621 ncRNA chr4-5201 chr4 161555671 161555881 + 8.60 0.000 intron (NM_001128428, intron 8 of 14) intron (NM_001128428, intron 8 of 14) -466957 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr12-3880 chr12 116773519 116773729 + 8.60 0.000 intron (NM_001109903, intron 6 of 11) intron (NM_001109903, intron 6 of 11) 35309 NM_032814 84900 Hs.437195 NM_032814 ENSG00000135119 RNFT2 TMEM118 ring finger protein, transmembrane 2 protein-coding chr2-6942 chr2 112956739 112956949 + 8.60 0.000 Intergenic Intergenic -21162 NM_019618 56300 Hs.211238 NM_019618 ENSG00000136688 IL36G IL-1F9|IL-1H1|IL-1RP2|IL1E|IL1F9|IL1H1|IL1RP2 interleukin 36 gamma protein-coding chr3-5660 chr3 12308550 12308760 + 8.60 0.000 intron (NM_001354667, intron 1 of 6) MER63B|DNA|hAT-Blackjack -3725 NM_001330615 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr4-2489 chr4 10346250 10346460 + 8.60 0.000 Intergenic Intergenic 111071 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr11-3855 chr11 73705071 73705281 + 8.60 0.000 intron (NM_001243718, intron 3 of 4) intron (NM_001243718, intron 3 of 4) 54917 NM_001243719 5870 Hs.503222 NM_002869 ENSG00000175582 RAB6A RAB6 RAB6A, member RAS oncogene family protein-coding chr1-3415 chr1 248863213 248863423 + 8.60 0.000 Intergenic MER52A|LTR|ERV1 -4233 NM_001350072 55657 Hs.377705 NM_017865 ENSG00000171163 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding chr7-3145 chr7 66883888 66884098 + 8.60 0.000 intron (NR_135738, intron 6 of 6) intron (NR_135738, intron 6 of 6) -20127 NR_136637 644794 Hs.552124 NR_136637 LINC02604 lncHERG long intergenic non-protein coding RNA 2604 ncRNA chr5-9029 chr5 168169199 168169409 + 8.60 0.000 intron (NM_001368145, intron 12 of 26) intron (NM_001368145, intron 12 of 26) 3459 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr16-3820 chr16 55314116 55314326 + 8.60 0.000 Intergenic L1PA10|LINE|L1 -10338 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr4-5097 chr4 147831099 147831309 + 8.60 0.000 intron (NM_024605, intron 3 of 22) intron (NM_024605, intron 3 of 22) 48609 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr12-5039 chr12 87771075 87771285 + 8.60 0.000 intron (NR_149056, intron 1 of 3) MLT1H2|LTR|ERVL-MaLR 2368 NR_149056 110806294 Hs.615803 NR_149056 LINC02258 - long intergenic non-protein coding RNA 2258 ncRNA chr19-1845 chr19 11538703 11538913 + 8.60 0.000 promoter-TSS (NM_001299) promoter-TSS (NM_001299) -43 NM_001308341 1264 Hs.465929 NM_001299 ENSG00000130176 CNN1 HEL-S-14|SMCC|Sm-Calp calponin 1 protein-coding chr11-6865 chr11 101414285 101414495 + 8.60 0.000 Intergenic LTR78B|LTR|ERV1 105515 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr1-13288 chr1 229832707 229832917 + 8.60 0.000 Intergenic MER101|LTR|ERV1 53006 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr8-5698 chr8 125809469 125809679 + 8.60 0.000 Intergenic MER57A1|LTR|ERV1 141623 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr3-9783 chr3 71703871 71704081 + 8.60 0.000 intron (NM_173359, intron 3 of 7) intron (NM_173359, intron 3 of 7) 21426 NM_001134651 317649 Hs.581355 NM_173359 ENSG00000163412 EIF4E3 eIF-4E3|eIF4E-3 eukaryotic translation initiation factor 4E family member 3 protein-coding chr2-8366 chr2 110723128 110723338 + 8.60 0.000 Intergenic Intergenic -9340 NM_001142807 55289 Hs.253320 NM_018308 ENSG00000153093 ACOXL - acyl-CoA oxidase like protein-coding chr1-13921 chr1 22614199 22614409 + 8.60 0.000 Intergenic Intergenic 19062 NR_106742 102466615 NR_106742 ENSG00000276835 MIR6127 hsa-mir-6127 microRNA 6127 ncRNA chr14-5378 chr14 103898832 103899042 + 8.60 0.000 Intergenic Intergenic 22592 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr10-6215 chr10 46046324 46046534 + 8.60 0.000 promoter-TSS (NM_002443) promoter-TSS (NM_002443) -160 NM_002443 4477 Hs.255462 NM_002443 ENSG00000263639 MSMB HPC13|IGBF|MSP|MSPB|PN44|PRPS|PSP|PSP-94|PSP57|PSP94 microseminoprotein beta protein-coding chr6-2467 chr6 36611327 36611537 + 8.60 0.000 Intergenic Intergenic 11080 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr6-6697 chr6 342089 342299 + 8.60 0.000 intron (NR_104474, intron 3 of 5) intron (NR_104474, intron 3 of 5) -49558 NR_046000 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr5-6110 chr5 25253256 25253466 + 8.60 0.000 intron (NR_136209, intron 1 of 3) L1PA13|LINE|L1 62408 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr1-12793 chr1 82469490 82469700 + 8.60 0.000 Intergenic Intergenic -433588 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr8-7370 chr8 137729560 137729770 + 8.60 0.000 Intergenic Intergenic -316077 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr21-861 chr21 34336678 34336888 + 8.60 0.000 Intergenic Intergenic -27241 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr7-6250 chr7 134593792 134594002 + 8.60 0.000 Intergenic Intergenic 44787 NR_160302 441282 Hs.729418 NM_001080538 ENSG00000227471 AKR1B15 AKR1B10L|AKR1B10L, AK1R1B7|AKR1R1B7 aldo-keto reductase family 1 member B15 protein-coding chr12-5598 chr12 48459351 48459561 + 8.60 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -13209 NM_012404 23519 Hs.532658 NM_012404 ENSG00000139223 ANP32D PP32R2 acidic nuclear phosphoprotein 32 family member D protein-coding chr11-3968 chr11 1409036 1409246 + 8.60 0.000 intron (NM_003957, intron 1 of 19) intron (NM_003957, intron 1 of 19) -1329 NM_001282218 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr14-2302 chr14 71726098 71726308 + 8.60 0.000 intron (NM_001354286, intron 20 of 24) intron (NM_001354286, intron 20 of 24) 139905 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr18-3454 chr18 67990265 67990475 + 8.60 0.000 Intergenic Intergenic -175548 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr5-8000 chr5 86145262 86145472 + 8.60 0.000 Intergenic L1PA12|LINE|L1 -137077 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr4-6563 chr4 184700085 184700295 + 8.60 0.000 intron (NR_104593, intron 10 of 11) intron (NR_104593, intron 10 of 11) 33906 NM_024629 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr17-6311 chr17 55452279 55452489 + 8.60 0.000 Intergenic Intergenic -30549 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr11-5317 chr11 48649062 48649272 + 8.60 0.000 Intergenic L1PA5|LINE|L1 160374 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding chr17-3461 chr17 41163795 41164005 + 8.60 0.000 intron (NM_001277332, intron 1 of 5) intron (NM_001277332, intron 1 of 5) -3152 NM_032524 84616 Hs.307022 NM_032524 ENSG00000171396 KRTAP4-4 KAP4.13|KAP4.4|KRTAP4-13|KRTAP4.13|KRTAP4.4 keratin associated protein 4-4 protein-coding chr22-1046 chr22 39968593 39968803 + 8.60 0.000 intron (NM_001291825, intron 5 of 6) intron (NM_001291825, intron 5 of 6) 21881 NM_001291825 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chr2-6953 chr2 120346861 120347071 + 8.60 0.000 intron (NM_002193, intron 1 of 1) intron (NM_002193, intron 1 of 1) 830 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr18-1547 chr18 23259703 23259913 + 8.60 0.000 non-coding (NR_023359, exon 7 of 7) non-coding (NR_023359, exon 7 of 7) 103983 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr17-7601 chr17 22051979 22052189 + 8.60 0.000 Intergenic L2a|LINE|L2 -150911 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr11-8438 chr11 111356139 111356349 + 8.60 0.000 intron (NM_006235, intron 4 of 4) intron (NM_006235, intron 4 of 4) 8487 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chrX-1759 chrX 55480331 55480541 + 8.60 0.000 Intergenic Intergenic 8762 NM_201286 158880 Hs.40061 NM_201286 ENSG00000247746 USP51 - ubiquitin specific peptidase 51 protein-coding chr2-5642 chr2 191866940 191867150 + 8.60 0.000 Intergenic Intergenic -19957 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr17-8163 chr17 60785523 60785733 + 8.60 0.000 intron (NM_001330413, intron 6 of 25) L1ME3G|LINE|L1 107777 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr12-5033 chr12 86543699 86543909 + 8.60 0.000 intron (NM_001351285, intron 2 of 8) MLT1H2|LTR|ERVL-MaLR 201345 NR_162123 113839519 NR_162123 MIR3059 - microRNA 3059 ncRNA chr22-3064 chr22 39942208 39942418 + 8.60 0.000 intron (NM_001291828, intron 1 of 4) intron (NM_001291828, intron 1 of 4) -4504 NM_001291825 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chrX-1732 chrX 37645156 37645366 + 8.60 0.000 intron (NM_198511, intron 1 of 5) intron (NM_198511, intron 1 of 5) -40530 NM_021083 7504 Hs.78919 NM_021083 ENSG00000047597 XK KX|NA|NAC|X1k|XKR1 X-linked Kx blood group protein-coding chr7-3948 chr7 130373393 130373603 + 8.60 0.000 Intergenic Intergenic -6371 NR_133928 105375504 Hs.436058 NR_133928 LOC105375504 - uncharacterized LOC105375504 ncRNA chrX-1334 chrX 134232152 134232362 + 8.60 0.000 Intergenic L2a|LINE|L2 -4956 NM_001101357 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr9-4355 chr9 130794997 130795207 + 8.60 0.000 intron (NM_007313, intron 1 of 10) intron (NM_007313, intron 1 of 10) -40152 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr17-7643 chr17 29243808 29244018 + 8.60 0.000 Intergenic Intergenic -2944 NM_005208 1411 Hs.46275 NM_005208 ENSG00000108255 CRYBA1 CRYB1|CTRCT10 crystallin beta A1 protein-coding chr7-3175 chr7 100015393 100015603 + 8.60 0.000 promoter-TSS (NM_001287055) promoter-TSS (NM_001287055) -54 NM_001287055 7586 Hs.615360 NM_003439 ENSG00000106261 ZKSCAN1 KOX18|PHZ-37|ZNF139|ZNF36|ZSCAN33 zinc finger with KRAB and SCAN domains 1 protein-coding chr1-5595 chr1 7934881 7935091 + 8.60 0.000 intron (NM_001561, intron 7 of 8) intron (NM_001561, intron 7 of 8) 8179 NM_001561 3604 Hs.86447 NM_001561 ENSG00000049249 TNFRSF9 4-1BB|CD137|CDw137|ILA TNF receptor superfamily member 9 protein-coding chr12-4139 chr12 74705254 74705464 + 8.60 0.000 Intergenic THE1D|LTR|ERVL-MaLR 167524 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr22-2381 chr22 47053069 47053279 + 8.60 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -137132 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr6-7805 chr6 99786983 99787193 + 8.60 0.000 Intergenic Intergenic 180314 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr12-3769 chr12 51932661 51932871 + 8.60 0.000 Intergenic Intergenic -18933 NM_004302 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr8-3539 chr8 120880261 120880471 + 8.60 0.000 Intergenic L2c|LINE|L2 -68320 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr3-9212 chr3 37608819 37609029 + 8.60 0.000 intron (NM_002207, intron 15 of 27) intron (NM_002207, intron 15 of 27) 156783 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr7-6996 chr7 117550929 117551139 + 8.60 0.000 intron (NM_000492, intron 10 of 26) L1ME4a|LINE|L1 13642 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr10-7783 chr10 35696964 35697174 + 8.60 0.000 Intergenic Intergenic -55635 NM_031866 8325 Hs.302634 NM_031866 ENSG00000177283 FZD8 FZ-8|hFZ8 frizzled class receptor 8 protein-coding chr12-1631 chr12 116202546 116202756 + 8.60 0.000 intron (NM_015335, intron 2 of 30) MIRb|SINE|MIR -53997 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr10-6832 chr10 22002438 22002648 + 8.60 0.000 intron (NM_022365, intron 1 of 11) intron (NM_022365, intron 1 of 11) 1187 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr2-14332 chr2 218110743 218110953 + 8.60 0.000 Intergenic HERV9-int|LTR|ERV1 -14446 NM_001168298 3579 Hs.846 NM_001557 ENSG00000180871 CXCR2 CD182|CDw128b|CMKAR2|IL8R2|IL8RA|IL8RB C-X-C motif chemokine receptor 2 protein-coding chr3-5551 chr3 4071671 4071881 + 8.60 0.000 Intergenic L1PA6|LINE|L1 -231528 NM_001320677 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr2-5743 chr2 218699027 218699237 + 8.60 0.000 exon (NM_001243313, exon 26 of 27) exon (NM_001243313, exon 26 of 27) -11703 NM_014640 9654 Hs.471405 NM_014640 ENSG00000135912 TTLL4 - tubulin tyrosine ligase like 4 protein-coding chr13-1207 chr13 51730052 51730262 + 8.60 0.000 intron (NM_052950, intron 6 of 11) L2|LINE|L2 74005 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr9-4637 chr9 112934562 112934772 + 8.60 0.000 Intergenic Intergenic -43791 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr9-7228 chr9 1403007 1403217 + 8.60 0.000 Intergenic MER45B|DNA|hAT-Tip100 351625 NR_163472 10655 Hs.59506 NM_006557 ENSG00000173253 DMRT2 - doublesex and mab-3 related transcription factor 2 protein-coding chr1-8095 chr1 6734767 6734977 + 8.60 0.000 Intergenic Intergenic 7345 NR_104621 100505887 Hs.250839 NR_104620 LINC01672 NMR long intergenic non-protein coding RNA 1672 ncRNA chr8-2793 chr8 121560245 121560455 + 8.60 0.000 Intergenic Intergenic -78996 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr11-6005 chr11 22213202 22213412 + 8.60 0.000 intron (NM_001142649, intron 3 of 21) L1MC3|LINE|L1 20131 NM_213599 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr3-8575 chr3 155565005 155565215 + 8.60 0.000 exon (NM_001349251, exon 8 of 23) exon (NM_001349251, exon 8 of 23) 79307 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr2-11993 chr2 27606816 27607026 + 8.60 0.000 intron (NM_001271289, intron 8 of 12) MLT1E2|LTR|ERVL-MaLR -21727 NM_001145047 11321 Hs.18259 NM_007266 ENSG00000198522 GPN1 ATPBD1A|MBDIN|NTPBP|RPAP4|XAB1 GPN-loop GTPase 1 protein-coding chr1-8376 chr1 69379378 69379588 + 8.60 0.000 Intergenic L1ME3Cz|LINE|L1 -53772 NR_147164 105378788 Hs.164441 NR_147164 ENSG00000229639 LINC01758 - long intergenic non-protein coding RNA 1758 ncRNA chr15-2378 chr15 50055118 50055328 + 8.60 0.000 intron (NR_073597, intron 3 of 26) MLT1K|LTR|ERVL-MaLR 58156 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr21-1732 chr21 33559719 33559929 + 8.60 0.000 TTS (NM_001291411) TTS (NM_001291411) 9162 NR_106756 102465248 NR_106756 ENSG00000284448 MIR6501 hsa-mir-6501|mir-6501 microRNA 6501 ncRNA chr7-3279 chr7 23288057 23288267 + 8.60 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -11177 NM_138446 115416 Hs.87385 NM_138446 ENSG00000156928 MALSU1 C7orf30|mtRsfA mitochondrial assembly of ribosomal large subunit 1 protein-coding chr6-4473 chr6 36133454 36133664 + 8.60 0.000 intron (NR_072996, intron 3 of 9) intron (NR_072996, intron 3 of 9) 3046 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr6-5913 chr6 53410722 53410932 + 8.60 0.000 Intergenic Tigger5|DNA|TcMar-Tigger -61648 NM_001242831 60481 Hs.520189 NM_021814 ENSG00000012660 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding chr9-3500 chr9 20214485 20214695 + 8.60 0.000 Intergenic AluY|SINE|Alu 196648 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr4-7175 chr4 40291129 40291339 + 8.60 0.000 Intergenic LTR8|LTR|ERV1 -15951 NR_121641 101060498 Hs.351492 NR_121640 ENSG00000249241 LINC02265 - long intergenic non-protein coding RNA 2265 ncRNA chr1-5460 chr1 60817656 60817866 + 8.60 0.000 intron (NR_110628, intron 1 of 5) LTR81AB|LTR|Gypsy 7823 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr11-4555 chr11 122628970 122629180 + 8.60 0.000 Intergenic Intergenic -26647 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr3-3593 chr3 64559978 64560188 + 8.60 0.000 intron (NM_001318781, intron 29 of 38) MIRb|SINE|MIR -1263 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr11-9037 chr11 26906411 26906621 + 8.60 0.000 Intergenic AluJo|SINE|Alu -87596 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr19-6723 chr19 37966256 37966466 + 8.60 0.000 intron (NM_015073, intron 1 of 21) intron (NM_015073, intron 1 of 21) 59153 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr18-2675 chr18 55268222 55268432 + 8.60 0.000 intron (NM_001348216, intron 4 of 12) intron (NM_001348216, intron 4 of 12) 34333 NM_001243236 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chrX-3597 chrX 80734270 80734480 + 8.60 0.000 intron (NM_153252, intron 10 of 40) intron (NM_153252, intron 10 of 40) 75502 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr2-11734 chr2 10731505 10731715 + 8.60 0.000 intron (NM_001039362, intron 3 of 13) intron (NM_001039362, intron 3 of 13) 9980 NM_001039362 245973 Hs.580464 NM_144583 ENSG00000143882 ATP6V1C2 ATP6C2|VMA5 ATPase H+ transporting V1 subunit C2 protein-coding chr3-9408 chr3 48370352 48370562 + 8.60 0.000 Intergenic Intergenic -1762 NM_001159929 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding chr9-6876 chr9 84908961 84909171 + 8.60 0.000 intron (NM_001018064, intron 13 of 17) L1MD1|LINE|L1 203165 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr17-4265 chr17 62876239 62876449 + 8.60 0.000 Intergenic Intergenic 67842 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 MARCH10-DT - MARCH10 divergent transcript ncRNA chr15-3846 chr15 84043025 84043235 + 8.60 0.000 Intergenic L1P1|LINE|L1 -37057 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr21-1681 chr21 27955639 27955849 + 8.60 0.000 Intergenic Intergenic -57619 NR_027246 246705 Hs.505079 NM_145180 ENSG00000178457 LINC00314 C21orf94|NCRNA00314 long intergenic non-protein coding RNA 314 ncRNA chr19-4762 chr19 30144880 30145090 + 8.60 0.000 Intergenic Intergenic 202746 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr4-7623 chr4 82705063 82705273 + 8.60 0.000 intron (NM_001037582, intron 2 of 4) intron (NM_001037582, intron 2 of 4) 48262 NR_030301 693160 NR_030301 ENSG00000207746 MIR575 MIRN575|hsa-mir-575 microRNA 575 ncRNA chr1-10371 chr1 155187017 155187227 + 8.60 0.000 intron (NM_001018017, intron 7 of 7) intron (NM_001018017, intron 7 of 7) 5787 NM_001204294 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr5-6889 chr5 129652864 129653074 + 8.60 0.000 intron (NM_133638, intron 13 of 22) intron (NM_133638, intron 13 of 22) -95125 NM_001257308 100127206 Hs.582534 NM_001257308 ENSG00000186367 MINAR2 KIAA1024L membrane integral NOTCH2 associated receptor 2 protein-coding chr16-4000 chr16 213899 214109 + 8.60 0.000 intron (NM_001330420, intron 3 of 9) AluSg4|SINE|Alu 15445 NM_018032 55692 Hs.16803 NM_018032 ENSG00000007392 LUC7L LUC7B1|Luc7|SR+89|hLuc7B1 LUC7 like protein-coding chr6-6754 chr6 2978242 2978452 + 8.60 0.000 Intergenic Intergenic -6182 NM_001271824 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr17-8156 chr17 60273208 60273418 + 8.60 0.000 intron (NM_032582, intron 5 of 33) L1MEc|LINE|L1 -41668 NR_002999 677681 NR_002999 ENSG00000252577 SCARNA20 ACA66 small Cajal body-specific RNA 20 ncRNA chr8-6890 chr8 101106267 101106477 + 8.60 0.000 Intergenic MER1B|DNA|hAT-Charlie 54318 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr21-428 chr21 34201887 34202097 + 8.60 0.000 Intergenic Intergenic 21315 NR_027266 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA chr12-2709 chr12 121318152 121318362 + 8.60 0.000 intron (NM_001137559, intron 15 of 16) intron (NM_001137559, intron 15 of 16) -19949 NM_006549 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr11-4451 chr11 97990441 97990651 + 8.60 0.000 Intergenic Intergenic -1030403 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr9-6432 chr9 74649371 74649581 + 8.60 0.000 intron (NM_006914, intron 4 of 9) intron (NM_006914, intron 4 of 9) 33942 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr15-3387 chr15 88174551 88174761 + 8.60 0.000 intron (NM_001007156, intron 5 of 15) intron (NM_001007156, intron 5 of 15) 31318 NM_001320135 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr4-4091 chr4 4887478 4887688 + 8.60 0.000 Intergenic HAL1|LINE|L1 27918 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr1-12413 chr1 10835253 10835463 + 8.60 0.000 Intergenic Intergenic -38712 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr5-2431 chr5 122301403 122301613 + 8.60 0.000 Intergenic Intergenic -10183 NR_131762 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr5-8971 chr5 161111122 161111332 + 8.60 0.000 Intergenic LTR16E2|LTR|ERVL -172601 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr9-5078 chr9 34252726 34252936 + 8.60 0.000 TTS (NM_001171204) TTS (NM_001171204) 73788 NM_016525 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr11-6689 chr11 77314012 77314222 + 8.60 0.000 Intergenic AluSx3|SINE|Alu -12451 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr15-2085 chr15 63678746 63678956 + 8.60 0.000 intron (NM_003922, intron 36 of 77) MIRb|SINE|MIR -78024 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr16-7014 chr16 87875796 87876006 + 8.60 0.000 Intergenic PRIMA4_LTR|LTR|ERV1 -6394 NM_003486 8140 Hs.513797 NM_003486 ENSG00000103257 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16 solute carrier family 7 member 5 protein-coding chr3-4603 chr3 196198388 196198598 + 8.60 0.000 non-coding (NR_135618, exon 7 of 8) non-coding (NR_135618, exon 7 of 8) 12907 NR_135617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr1-7598 chr1 235588869 235589079 + 8.60 0.000 intron (NM_004485, intron 1 of 2) intron (NM_004485, intron 1 of 2) 60810 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr5-7000 chr5 152376236 152376446 + 8.60 0.000 Intergenic L2a|LINE|L2 28938 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr12-4496 chr12 21057197 21057407 + 8.60 0.000 intron (NM_001009562, intron 10 of 12) L2a|LINE|L2 41606 NM_001009562 338821 Hs.729117 NM_001009562 ENSG00000205754 SLCO1B7 LST-3|LST-3TM12|LST3|SLC21A21 solute carrier organic anion transporter family member 1B7 (putative) protein-coding chr19-2941 chr19 4541587 4541797 + 8.60 0.000 TTS (NM_032108) TTS (NM_032108) -1656 NM_052972 116844 Hs.655559 NM_052972 ENSG00000171236 LRG1 HMFT1766|LRG leucine rich alpha-2-glycoprotein 1 protein-coding chr18-2650 chr18 46210512 46210722 + 8.60 0.000 intron (NM_001008239, intron 1 of 3) L2|LINE|L2 36583 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr8-3406 chr8 67912733 67912943 + 8.60 0.000 Intergenic Intergenic -39208 NM_024870 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr4-2106 chr4 53189155 53189365 + 8.60 0.000 intron (NM_152540, intron 4 of 8) MLT1K|LTR|ERVL-MaLR 176801 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr1-10023 chr1 87155119 87155329 + 8.60 0.000 intron (NR_026989, intron 2 of 2) intron (NR_026989, intron 2 of 2) 23298 NR_026986 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr10-3865 chr10 29806862 29807072 + 8.60 0.000 Intergenic Intergenic -70031 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr6-5348 chr6 148250047 148250257 + 8.60 0.000 Intergenic Intergenic -22176 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr18-2602 chr18 23114829 23115039 + 8.60 0.000 Intergenic Intergenic -19630 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr19-6851 chr19 43270671 43270881 + 8.60 0.000 Intergenic Intergenic -1246 NM_001301708 5678 Hs.502092 NM_002784 ENSG00000183668 PSG9 PS34|PSBG-11|PSBG-9|PSG11|PSGII pregnancy specific beta-1-glycoprotein 9 protein-coding chr9-6250 chr9 126686443 126686653 + 8.60 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 72105 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr6-7097 chr6 34193131 34193341 + 8.60 0.000 Intergenic AluSg|SINE|Alu -37614 NM_001256809 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr7-4014 chr7 148498112 148498322 + 8.60 0.000 Intergenic MER34A1|LTR|ERV1 -92549 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chrX-2067 chrX 19639612 19639822 + 8.60 0.000 intron (NM_001024666, intron 6 of 16) intron (NM_001024666, intron 6 of 16) 31282 NM_001353897 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr6-3593 chr6 84420482 84420692 + 8.60 0.000 TTS (NR_132100) TTS (NR_132100) 54342 NR_132100 105377880 Hs.171384 NR_132100 ENSG00000231776 LINC01611 TCONS_l2_00025430 long intergenic non-protein coding RNA 1611 ncRNA chr3-10333 chr3 127184874 127185084 + 8.60 0.000 Intergenic Intergenic -8152 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr14-3435 chr14 98404135 98404345 + 8.60 0.000 Intergenic Intergenic -307373 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr12-7433 chr12 61090825 61091035 + 8.60 0.000 Intergenic L1M1|LINE|L1 1101909 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr5-3242 chr5 95773486 95773696 + 8.60 0.000 intron (NM_014899, intron 8 of 11) MIRc|SINE|MIR -41489 NM_001349303 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr1-9034 chr1 12047478 12047688 + 8.60 0.000 Intergenic Intergenic -15720 NM_001243 943 Hs.1314 NM_001243 ENSG00000120949 TNFRSF8 CD30|D1S166E|Ki-1 TNF receptor superfamily member 8 protein-coding chr4-6218 chr4 56619974 56620184 + 8.60 0.000 Intergenic Intergenic 36443 NM_139211 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding chr19-3099 chr19 6753561 6753771 + 8.60 0.000 intron (NM_005490, intron 8 of 9) intron (NM_005490, intron 8 of 9) 13769 NM_005490 10045 Hs.439645 NM_005490 ENSG00000125731 SH2D3A NSP1 SH2 domain containing 3A protein-coding chr1-14931 chr1 85690563 85690773 + 8.60 0.000 intron (NM_017953, intron 5 of 9) intron (NM_017953, intron 5 of 9) 17765 NM_001170670 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr12-7813 chr12 99281499 99281709 + 8.60 0.000 intron (NM_152788, intron 12 of 25) intron (NM_152788, intron 12 of 25) -126514 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr10-2469 chr10 24686075 24686285 + 8.60 0.000 intron (NM_001367447, intron 2 of 24) AluJb|SINE|Alu 36568 NM_001367454 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr1-8018 chr1 225658201 225658411 + 8.60 0.000 Intergenic Intergenic -5183 NM_001008493 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr11-7148 chr11 126874403 126874613 + 8.60 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -66238 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr7-7990 chr7 15853349 15853559 + 8.60 0.000 Intergenic L2b|LINE|L2 165076 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr6-3410 chr6 90160201 90160411 + 8.60 0.000 intron (NM_021813, intron 4 of 8) intron (NM_021813, intron 4 of 8) 136537 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr1-5429 chr1 31876834 31877044 + 8.60 0.000 Intergenic AluSx1|SINE|Alu 60879 NM_001369858 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr1-5915 chr1 15975448 15975658 + 8.60 0.000 intron (NM_001287603, intron 1 of 15) CpG 579 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr12-3842 chr12 95860031 95860241 + 8.60 0.000 intron (NM_003095, intron 1 of 3) intron (NM_003095, intron 1 of 3) 1184 NM_003095 6636 Hs.105465 NM_003095 ENSG00000139343 SNRPF SMF|Sm-F|snRNP-F small nuclear ribonucleoprotein polypeptide F protein-coding chr1-16603 chr1 237892105 237892315 + 8.60 0.000 intron (NR_027247, intron 4 of 11) intron (NR_027247, intron 4 of 11) -1288 NM_021186 57829 Hs.136241 NM_021186 ENSG00000116996 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding chr11-9230 chr11 41218242 41218452 + 8.60 0.000 intron (NM_001258419, intron 1 of 6) Charlie17a|DNA|hAT-Charlie 241289 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr17-6545 chr17 40178857 40179067 + 8.60 0.000 intron (NM_016339, intron 1 of 14) intron (NM_016339, intron 1 of 14) 1492 NM_016339 51195 Hs.632254 NM_016339 ENSG00000108352 RAPGEFL1 Link-GEFII Rap guanine nucleotide exchange factor like 1 protein-coding chr7-3558 chr7 18161644 18161854 + 8.60 0.000 intron (NM_001204144, intron 1 of 12) intron (NM_001204144, intron 1 of 12) -34440 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr10-9160 chr10 128942129 128942339 + 8.60 0.000 Intergenic Intergenic 29401 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr3-8948 chr3 14620585 14620795 + 8.60 0.000 Intergenic Intergenic -31056 NR_135523 51244 Hs.517820 NM_016474 ENSG00000154781 CCDC174 C3orf19|HSPC212|IHPM|IHPMR coiled-coil domain containing 174 protein-coding chr12-2695 chr12 106288447 106288657 + 8.60 0.000 Intergenic MER44B|DNA|TcMar-Tigger -14181 NM_152772 255394 Hs.696047 NM_152772 ENSG00000166046 TCP11L2 - t-complex 11 like 2 protein-coding chr10-2294 chr10 21200210 21200420 + 8.60 0.000 Intergenic AluSx|SINE|Alu 26013 NR_046284 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA chr8-4121 chr8 73101963 73102173 + 8.60 0.000 Intergenic Intergenic -8896 NM_153225 157869 Hs.439040 NM_153225 ENSG00000164764 SBSPON C8orf84|RPESP somatomedin B and thrombospondin type 1 domain containing protein-coding chr7-8700 chr7 74269773 74269983 + 8.60 0.000 Intergenic Intergenic -15420 NM_001278791 5982 Hs.647062 NM_002914 ENSG00000049541 RFC2 RFC40 replication factor C subunit 2 protein-coding chr6-2735 chr6 77293269 77293479 + 8.60 0.000 Intergenic Intergenic 170648 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr17-4009 chr17 74619058 74619268 + 8.60 0.000 intron (NM_181449, intron 1 of 3) intron (NM_181449, intron 1 of 3) 4575 NM_181449 342510 Hs.158954 NM_181449 ENSG00000186407 CD300E CD300LE|CLM-2|CLM2|CMRF35-A5|IREM-2|IREM2|PIgR-2|PIgR2 CD300e molecule protein-coding chr10-7347 chr10 779291 779501 + 8.60 0.000 Intergenic Intergenic -89728 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr15-3548 chr15 101400860 101401070 + 8.60 0.000 intron (NM_138325, intron 6 of 13) intron (NM_138325, intron 6 of 13) 66528 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr4-5885 chr4 128718134 128718344 + 8.60 0.000 Intergenic AluSx|SINE|Alu -91461 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr6-6962 chr6 17724451 17724661 + 8.60 0.000 Intergenic Intergenic 17513 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr1-9375 chr1 30179976 30180186 + 8.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -142469 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr1-9578 chr1 43316339 43316549 + 8.60 0.000 intron (NM_001253357, intron 14 of 22) intron (NM_001253357, intron 14 of 22) 15462 NM_005424 7075 Hs.78824 NM_005424 ENSG00000066056 TIE1 JTK14|TIE tyrosine kinase with immunoglobulin like and EGF like domains 1 protein-coding chr16-2031 chr16 28514288 28514498 + 8.60 0.000 Intergenic Intergenic -7559 NM_145659 246778 Hs.528111 NM_145659 ENSG00000197272 IL27 IL-27|IL-27A|IL27A|IL27p28|IL30|p28 interleukin 27 protein-coding chr12-1868 chr12 52238058 52238268 + 8.60 0.000 intron (NM_005556, intron 3 of 8) intron (NM_005556, intron 3 of 8) 4920 NM_005556 3855 Hs.411501 NM_005556 ENSG00000135480 KRT7 CK7|K2C7|K7|SCL keratin 7 protein-coding chr3-11176 chr3 191978002 191978212 + 8.60 0.000 Intergenic L1PB1|LINE|L1 -260523 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr3-3887 chr3 41847012 41847222 + 8.60 0.000 intron (NR_136342, intron 16 of 34) intron (NR_136342, intron 16 of 34) 114986 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr6-4942 chr6 101234672 101234882 + 8.60 0.000 Intergenic Intergenic -164208 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr16-4723 chr16 83681709 83681919 + 8.60 0.000 intron (NM_001220489, intron 9 of 12) intron (NM_001220489, intron 9 of 12) 122162 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr1-6205 chr1 207938103 207938313 + 8.60 0.000 Intergenic MER57C2|LTR|ERV1 -27083 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr6-3750 chr6 11200341 11200551 + 8.60 0.000 3' UTR (NM_182966, exon 3 of 3) 3' UTR (NM_182966, exon 3 of 3) 32222 NM_006403 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr13-3397 chr13 91583773 91583983 + 8.60 0.000 intron (NM_004466, intron 2 of 7) intron (NM_004466, intron 2 of 7) 185257 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr17-5951 chr17 76306779 76306989 + 8.60 0.000 intron (NM_032134, intron 1 of 18) AluSz|SINE|Alu 796 NR_130649 84074 Hs.252739 NM_032134 ENSG00000129646 QRICH2 SPGF35 glutamine rich 2 protein-coding chr9-7874 chr9 87267666 87267876 + 8.60 0.000 Intergenic Intergenic 119127 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr17-3783 chr17 39089195 39089405 + 8.60 0.000 intron (NM_020405, intron 7 of 13) MLT1O|LTR|ERVL-MaLR 32281 NR_036551 100131347 Hs.676510 NR_036551 ENSG00000263818 RDM1P5 - RDM1 pseudogene 5 pseudo chr3-10491 chr3 135540129 135540339 + 8.60 0.000 Intergenic MIRb|SINE|MIR -425494 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr3-5160 chr3 59426596 59426806 + 8.60 0.000 Intergenic Intergenic 231796 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr6-5827 chr6 22043766 22043976 + 8.60 0.000 intron (NR_015410, intron 7 of 11) intron (NR_015410, intron 7 of 11) 103322 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr19-3572 chr19 47389401 47389611 + 8.60 0.000 Intergenic MIR|SINE|MIR 30021 NM_001009813 56917 Hs.380923 NM_020160 ENSG00000105419 MEIS3 MRG2 Meis homeobox 3 protein-coding chr1-9788 chr1 56955023 56955233 + 8.60 0.000 intron (NM_000066, intron 3 of 11) MIR|SINE|MIR 10887 NM_000066 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr2-12564 chr2 69450588 69450798 + 8.60 0.000 Intergenic ERV24B_Prim-int|LTR|ERV1 -13065 NM_001002756 27247 Hs.430439 NM_015700 ENSG00000169599 NFU1 CGI-33|HIRIP|HIRIP5|MMDS1|NIFUC|Nfu|NifU NFU1 iron-sulfur cluster scaffold protein-coding chr20-1875 chr20 44597365 44597575 + 8.60 0.000 intron (NM_007066, intron 2 of 3) L2b|LINE|L2 14891 NM_001281445 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr6-1589 chr6 26157686 26157896 + 8.60 0.000 promoter-TSS (NM_138720) promoter-TSS (NM_138720) -330 NM_021063 3017 Hs.591797 NM_021063 ENSG00000158373 HIST1H2BD H2B.1B|H2B/a|H2B/b|H2B/g|H2B/h|H2B/k|H2B/l|H2BFA|H2BFB|H2BFG|H2BFH|H2BFK|H2BFL|HIRIP2|HIST1H2BC|HIST1H2BE|HIST1H2BF|HIST1H2BG|HIST1H2BI|dJ221C16.6 histone cluster 1 H2B family member d protein-coding chr3-5209 chr3 76690014 76690224 + 8.60 0.000 Intergenic Intergenic -349980 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr11-8024 chr11 16287105 16287315 + 8.60 0.000 intron (NM_033326, intron 3 of 15) intron (NM_033326, intron 3 of 15) 69336 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chrX-941 chrX 46923803 46924013 + 8.60 0.000 intron (NM_014735, intron 1 of 10) L1MCa|LINE|L1 11487 NM_014735 9767 Hs.371977 NM_014735 ENSG00000102221 JADE3 JADE-3|PHF16 jade family PHD finger 3 protein-coding chr2-11659 chr2 7158221 7158431 + 8.60 0.000 Intergenic Intergenic -80446 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr3-8195 chr3 41637235 41637445 + 8.60 0.000 intron (NR_136342, intron 28 of 34) L1MA8|LINE|L1 324763 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr12-4037 chr12 48591322 48591532 + 8.60 0.000 Intergenic L1PA13|LINE|L1 -21381 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr5-4661 chr5 36630646 36630856 + 8.60 0.000 intron (NM_004172, intron 3 of 9) intron (NM_004172, intron 3 of 9) 24145 NM_001166695 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr11-10351 chr11 110952686 110952896 + 8.60 0.000 Intergenic Intergenic 144527 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr1-6620 chr1 42747319 42747529 + 8.60 0.000 intron (NM_001243246, intron 13 of 13) intron (NM_001243246, intron 13 of 13) -7170 NM_001185117 149461 Hs.496270 NM_148960 ENSG00000164007 CLDN19 HOMG5 claudin 19 protein-coding chr2-6845 chr2 70498320 70498530 + 8.60 0.000 intron (NM_003236, intron 2 of 5) intron (NM_003236, intron 2 of 5) -16785 NR_046798 100874273 Hs.682157 NR_046798 ENSG00000224606 TGFA-IT1 - TGFA intronic transcript 1 ncRNA chr1-16489 chr1 229349650 229349860 + 8.60 0.000 Intergenic Intergenic -6708 NM_145257 126731 Hs.585011 NM_145257 ENSG00000154429 CCSAP C1orf96|CSAP centriole, cilia and spindle associated protein protein-coding chr7-2249 chr7 151481934 151482144 + 8.60 0.000 intron (NM_005614, intron 3 of 7) intron (NM_005614, intron 3 of 7) 37856 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr6-2475 chr6 44179335 44179545 + 8.60 0.000 intron (NM_007058, intron 12 of 22) intron (NM_007058, intron 12 of 22) 20620 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr11-3545 chr11 18134867 18135077 + 8.60 0.000 intron (NM_054031, intron 2 of 2) intron (NM_054031, intron 2 of 2) 2401 NM_001370464 117195 Hs.380177 NM_054031 ENSG00000179826 MRGPRX3 GPCR|MRGX3|SNSR1|SNSR2 MAS related GPR family member X3 protein-coding chr10-4035 chr10 18169816 18170026 + 8.60 0.000 intron (NM_201593, intron 2 of 13) MLT1K|LTR|ERVL-MaLR 29497 NM_201572 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr6-3241 chr6 144722336 144722546 + 8.60 0.000 intron (NM_007124, intron 52 of 73) MLT1H|LTR|ERVL-MaLR 316786 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr7-8836 chr7 86399799 86400009 + 8.60 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR -244005 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chr22-3090 chr22 45078309 45078519 + 8.60 0.000 Intergenic Intergenic -68409 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr1-5918 chr1 16779652 16779862 + 8.60 0.000 Intergenic MIRc|SINE|MIR -15277 NM_001271733 11223 Hs.349110 NM_001271733 MST1L BRF-1|D1F15S1A|MSPL-7|MSPL7|MST1P9|MSTP7|MSTP9 macrophage stimulating 1 like protein-coding chr1-13176 chr1 205095335 205095545 + 8.60 0.000 intron (NM_001193273, intron 12 of 13) MER30|DNA|hAT-Charlie -10980 NM_203376 388730 Hs.146928 NM_203376 ENSG00000174529 TMEM81 HC3107|KVLA2788|UNQ2788 transmembrane protein 81 protein-coding chr2-7759 chr2 39160134 39160344 + 8.60 0.000 Intergenic MIRb|SINE|MIR -39776 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr11-10515 chr11 119403023 119403233 + 8.60 0.000 intron (NR_034160, intron 2 of 3) intron (NR_034160, intron 2 of 3) 19434 NM_001311160 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chrX-2990 chrX 42312898 42313108 + 8.60 0.000 Intergenic L1MA2|LINE|L1 -389449 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr6-8247 chr6 137573958 137574168 + 8.60 0.000 Intergenic L2c|LINE|L2 -79669 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr18-1389 chr18 57542186 57542396 + 8.60 0.000 Intergenic Intergenic 44411 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr22-1454 chr22 47068133 47068343 + 8.60 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -152196 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr13-2685 chr13 88397297 88397507 + 8.60 0.000 Intergenic L1PREC2|LINE|L1 -143427 NR_047021 100874168 Hs.126406 NR_047021 LINC00433 - long intergenic non-protein coding RNA 433 ncRNA chr22-1767 chr22 27879915 27880125 + 8.60 0.000 intron (NM_001284278, intron 7 of 11) intron (NM_001284278, intron 7 of 11) 39194 NM_001284278 23760 Hs.705323 NM_012399 ENSG00000180957 PITPNB PI-TP-beta|PtdInsTP|VIB1B phosphatidylinositol transfer protein beta protein-coding chr4-4364 chr4 39412343 39412553 + 8.60 0.000 TTS (NR_049857) TTS (NR_049857) 538 NR_049857 100847065 NR_049857 ENSG00000264621 MIR5591 - microRNA 5591 ncRNA chr10-3600 chr10 90179981 90180191 + 8.60 0.000 Intergenic Intergenic -222713 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chrX-86 chrX 1367438 1367648 + 8.60 0.000 intron (NM_002183, intron 9 of 11) CpG 24570 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chr18-1490 chr18 67670037 67670247 + 8.60 0.000 intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) 144680 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr2-8096 chr2 75607244 75607454 + 8.60 0.000 Intergenic Intergenic -37630 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr22-1941 chr22 47038380 47038590 + 8.60 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -122443 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr4-1816 chr4 74893210 74893420 + 8.60 0.000 Intergenic MER110|LTR|ERV1 -39801 NM_015393 25849 Hs.105460 NM_015393 ENSG00000169116 PARM1 Cipar1|DKFZP564O0823|PARM-1|WSC4 prostate androgen-regulated mucin-like protein 1 protein-coding chr12-2205 chr12 37423560 37423770 + 8.60 0.000 Intergenic SST1|Satellite|centr -893109 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr1-6131 chr1 162613386 162613596 + 8.60 0.000 Intergenic Intergenic -17372 NM_001354983 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr3-4067 chr3 86815208 86815418 + 8.60 0.000 Intergenic Intergenic 175836 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr3-5593 chr3 8176028 8176238 + 8.60 0.000 Intergenic Tigger18a|DNA|TcMar-Tigger -159826 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr16-2575 chr16 84909169 84909379 + 8.60 0.000 3' UTR (NM_031476, exon 15 of 15) 3' UTR (NM_031476, exon 15 of 15) 89289 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr8-5726 chr8 133911797 133912007 + 8.60 0.000 Intergenic Intergenic 25406 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr4-7627 chr4 82865768 82865978 + 8.60 0.000 intron (NM_016211, intron 10 of 24) L1MB2|LINE|L1 25280 NM_001077207 22872 Hs.370024 NM_014933 ENSG00000138674 SEC31A ABP125|ABP130|HSPC275|HSPC334|SEC31L1 SEC31 homolog A, COPII coat complex component protein-coding chr7-8317 chr7 41495047 41495257 + 8.60 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -198767 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr3-6472 chr3 108884100 108884310 + 8.60 0.000 Intergenic L2b|LINE|L2 61419 NM_001317747 50852 Hs.138701 NM_016388 ENSG00000163519 TRAT1 HSPC062|TCRIM|TRIM|pp29/30 T cell receptor associated transmembrane adaptor 1 protein-coding chr8-4407 chr8 106594983 106595193 + 8.60 0.000 intron (NM_018002, intron 3 of 15) Charlie8|DNA|hAT-Charlie -62720 NM_181354 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr11-10534 chr11 120108055 120108265 + 8.60 0.000 Intergenic Intergenic 20693 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr19-4612 chr19 13173109 13173319 + 8.60 0.000 Intergenic Intergenic 22803 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr22-3186 chr22 33926719 33926929 + 8.60 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -3936 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr1-5811 chr1 205328765 205328975 + 8.60 0.000 Intergenic Intergenic -7125 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr20-1547 chr20 58081912 58082122 + 8.60 0.000 Intergenic Charlie5|DNA|hAT-Charlie -68885 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr8-3053 chr8 355024 355234 + 8.60 0.000 Intergenic Intergenic 28045 NR_103537 157693 Hs.591390 NR_103537 ENSG00000182366 FAM87A - family with sequence similarity 87 member A ncRNA chr2-10423 chr2 198587680 198587890 + 8.60 0.000 Intergenic Intergenic -212688 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr10-1820 chr10 132764394 132764604 + 8.60 0.000 intron (NM_005539, intron 11 of 15) intron (NM_005539, intron 11 of 15) 21648 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr12-3652 chr12 109370205 109370415 + 8.60 0.000 Intergenic Intergenic -10822 NR_120462 101928138 Hs.143843 NR_120462 ENSG00000256560 LINC01486 - long intergenic non-protein coding RNA 1486 ncRNA chr9-3285 chr9 69650040 69650250 + 8.60 0.000 intron (NM_001163, intron 1 of 12) MIR|SINE|MIR 22226 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr11-7134 chr11 125777485 125777695 + 8.60 0.000 intron (NM_212555, intron 3 of 3) intron (NM_212555, intron 3 of 3) 1238 NM_212555 399967 Hs.369185 NM_212555 ENSG00000196844 PATE2 C11orf38|PATE-M|UNQ3112 prostate and testis expressed 2 protein-coding chr6-3340 chr6 16432228 16432438 + 8.60 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 193746 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chrX-2445 chrX 81165436 81165646 + 8.60 0.000 intron (NM_030763, intron 1 of 6) MamGyp-int|LTR|Gypsy 36372 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr1-8252 chr1 32767970 32768180 + 8.60 0.000 exon (NM_001198973, exon 3 of 5) exon (NM_001198973, exon 3 of 5) 2448 NM_001198972 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr9-6433 chr9 75378033 75378243 + 8.60 0.000 Intergenic Intergenic 289624 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr22-1367 chr22 30255947 30256157 + 8.60 0.000 Intergenic Intergenic -9293 NM_001257135 3976 Hs.2250 NM_002309 ENSG00000128342 LIF CDF|DIA|HILDA|MLPLI LIF interleukin 6 family cytokine protein-coding chr2-14024 chr2 192146346 192146556 + 8.60 0.000 intron (NM_001305134, intron 4 of 9) intron (NM_001305134, intron 4 of 9) 48482 NM_016192 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr11-8072 chr11 34085041 34085251 + 8.60 0.000 intron (NM_005898, intron 9 of 18) intron (NM_005898, intron 9 of 18) -20483 NM_024662 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr5-7769 chr5 61862180 61862390 + 8.60 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -126587 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr3-4231 chr3 138329256 138329466 + 8.60 0.000 5' UTR (NM_001349023, exon 1 of 9) 5' UTR (NM_001349023, exon 1 of 9) 490 NM_001349020 347736 Hs.660992 NM_178130 ENSG00000181322 NME9 NM23-H9|TXL-2|TXL2|TXNDC6 NME/NM23 family member 9 protein-coding chr2-12961 chr2 103328967 103329177 + 8.60 0.000 Intergenic L1MC3|LINE|L1 -344643 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr19-6589 chr19 24277597 24277807 + 8.60 0.000 Intergenic MER11C|LTR|ERVK -114255 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo chr19-3149 chr19 32634087 32634297 + 8.60 0.000 intron (NM_032139, intron 12 of 28) intron (NM_032139, intron 12 of 28) -25723 NR_145718 109616972 NR_145718 ENSG00000201388 SNORA68B - small nucleolar RNA, H/ACA box 68B snoRNA chr14-3433 chr14 98281279 98281489 + 8.60 0.000 Intergenic Intergenic -303260 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr19-4500 chr19 6176306 6176516 + 8.60 0.000 intron (NM_030924, intron 7 of 14) intron (NM_030924, intron 7 of 14) 40744 NM_001289178 81616 Hs.465720 NM_030924 ENSG00000130377 ACSBG2 BGR|BRGL|PRTD-NY3|PRTDNY3 acyl-CoA synthetase bubblegum family member 2 protein-coding chr5-3662 chr5 155391306 155391516 + 8.60 0.000 Intergenic Intergenic 377656 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr19-5123 chr19 415842 416052 + 8.60 0.000 TTS (NM_012435) TTS (NM_012435) -6800 NM_001136263 126567 Hs.223770 NM_001136263 ENSG00000183186 C2CD4C FAM148C|KIAA1957|NLF3 C2 calcium dependent domain containing 4C protein-coding chr1-16412 chr1 225477614 225477824 + 8.60 0.000 Intergenic Intergenic -48864 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr17-3739 chr17 28363931 28364141 + 8.60 0.000 TTS (NM_001080837) TTS (NM_001080837) 1115 NM_001080837 645832 NM_001080837 ENSG00000274529 SEBOX OG-9|OG9|OG9X SEBOX homeobox protein-coding chr3-6782 chr3 143072617 143072827 + 8.60 0.000 Intergenic LTR7|LTR|ERV1 -47049 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr14-1852 chr14 68895423 68895633 + 8.60 0.000 intron (NM_001102, intron 8 of 20) intron (NM_001102, intron 8 of 20) 83774 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr17-7439 chr17 11894035 11894245 + 8.60 0.000 intron (NM_001372, intron 58 of 68) intron (NM_001372, intron 58 of 68) 11238 NM_004662 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr3-10430 chr3 131475911 131476121 + 8.60 0.000 intron (NM_007208, intron 6 of 9) intron (NM_007208, intron 6 of 9) 3217 NR_002985 677836 Hs.735762 NR_002985 SNORA58 ACA58|SNORA58B small nucleolar RNA, H/ACA box 58 snoRNA chr9-7020 chr9 118609458 118609668 + 8.60 0.000 Intergenic Intergenic -70108 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr11-4327 chr11 70466684 70466894 + 8.60 0.000 Intergenic Intergenic 68260 NM_005231 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr21-981 chr21 9734465 9734675 + 8.60 0.000 Intergenic Intergenic 72381 NR_135513 105379514 Hs.543309 NR_135513 LOC105379514 - uncharacterized LOC105379514 ncRNA chr4-1118 chr4 84965969 84966179 + 8.60 0.000 promoter-TSS (NR_015359) promoter-TSS (NR_015359) 458 NR_152772 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr10-6822 chr10 18229953 18230163 + 8.60 0.000 intron (NM_201593, intron 2 of 13) intron (NM_201593, intron 2 of 13) -30664 NM_000724 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr19-4473 chr19 5444288 5444498 + 8.60 0.000 Intergenic L2a|LINE|L2 -11024 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr1-9859 chr1 65151713 65151923 + 8.60 0.000 intron (NM_001330616, intron 1 of 4) L3|LINE|CR1 2824 NM_001330616 205 Hs.10862 NM_013410 ENSG00000162433 AK4 AK 4|AK3|AK3L1|AK3L2 adenylate kinase 4 protein-coding chr10-1627 chr10 76838525 76838735 + 8.60 0.000 Intergenic AluY|SINE|Alu -49414 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr15-1896 chr15 75352293 75352503 + 8.60 0.000 intron (NM_001256552, intron 4 of 9) intron (NM_001256552, intron 4 of 9) 1287 NR_030360 693216 NR_030360 ENSG00000284343 MIR631 MIRN631|hsa-mir-631 microRNA 631 ncRNA chr6-3960 chr6 99871276 99871486 + 8.60 0.000 Intergenic Intergenic -122657 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr5-4367 chr5 171279243 171279453 + 8.60 0.000 intron (NM_022897, intron 25 of 27) MSTD|LTR|ERVL-MaLR -29900 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr7-4214 chr7 149794738 149794948 + 8.60 0.000 non-coding (NR_163594, exon 40 of 103) non-coding (NR_163594, exon 40 of 103) 18801 NR_163594 23145 Hs.632022 NR_163594 ENSG00000197558 SSPO - SCO-spondin pseudo chr6-3906 chr6 68846720 68846930 + 8.60 0.000 intron (NM_001704, intron 3 of 31) THE1A-int|LTR|ERVL-MaLR 211543 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr8-6481 chr8 62698563 62698773 + 8.60 0.000 intron (NM_001304533, intron 3 of 6) L3|LINE|CR1 -279193 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr22-1610 chr22 22903473 22903683 + 8.60 0.000 Intergenic Intergenic 15762 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr14-2170 chr14 92490057 92490267 + 8.60 0.000 intron (NM_153647, intron 15 of 17) intron (NM_153647, intron 15 of 17) -23619 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr1-15689 chr1 167777004 167777214 + 8.60 0.000 intron (NM_003953, intron 5 of 5) intron (NM_003953, intron 5 of 5) 55127 NM_001146191 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr11-8466 chr11 116901886 116902096 + 8.60 0.000 intron (NM_001366686, intron 4 of 24) intron (NM_001366686, intron 4 of 24) -64041 NM_000039 335 Hs.93194 NM_000039 ENSG00000118137 APOA1 apo(a) apolipoprotein A1 protein-coding chr13-1363 chr13 76879533 76879743 + 8.60 0.000 TTS (NM_138444) TTS (NM_138444) 6767 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr8-1743 chr8 23083933 23084143 + 8.60 0.000 promoter-TSS (NR_046173) promoter-TSS (NR_046173) -317 NR_046173 254896 Hs.735240 NR_046173 ENSG00000284948 LOC254896 - uncharacterized LOC254896 ncRNA chr3-2378 chr3 174440694 174440904 + 8.60 0.000 Intergenic Intergenic -418535 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr2-11195 chr2 157947351 157947561 + 8.60 0.000 Intergenic MLT2F|LTR|ERVL -47723 NM_001135098 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr6-5675 chr6 107005620 107005830 + 8.60 0.000 Intergenic Zaphod|DNA|hAT-Tip100 -22474 NM_016487 51250 Hs.486084 NM_016487 ENSG00000130349 C6orf203 HSPC230|PRED31 chromosome 6 open reading frame 203 protein-coding chr11-3425 chr11 45661663 45661873 + 8.60 0.000 intron (NM_003654, intron 1 of 3) intron (NM_003654, intron 1 of 3) 3854 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr16-2044 chr16 57906540 57906750 + 8.60 0.000 intron (NM_001297, intron 25 of 32) intron (NM_001297, intron 25 of 32) 64483 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr11-10383 chr11 112929189 112929399 + 8.60 0.000 Intergenic HERVK3-int|LTR|ERVK -32126 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr6-7550 chr6 70868594 70868804 + 8.60 0.000 intron (NM_080742, intron 2 of 3) intron (NM_080742, intron 2 of 3) 88361 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr13-1842 chr13 99304320 99304530 + 8.60 0.000 intron (NM_004951, intron 1 of 1) L2c|LINE|L2 2974 NM_004951 1880 Hs.784 NM_004951 ENSG00000169508 GPR183 EBI2|hEBI2 G protein-coupled receptor 183 protein-coding chr2-9737 chr2 71023198 71023408 + 8.60 0.000 promoter-TSS (NR_002185) promoter-TSS (NR_002185) -772 NR_002185 79315 Hs.327033 NR_002185 ENSG00000205847 OR7E91P - olfactory receptor family 7 subfamily E member 91 pseudogene pseudo chr17-6741 chr17 82073239 82073449 + 8.60 0.000 Intergenic AluJb|SINE|Alu -7540 NM_022156 64118 Hs.514599 NM_022156 ENSG00000169718 DUS1L DUS1|PP3111 dihydrouridine synthase 1 like protein-coding chr13-2320 chr13 32731690 32731900 + 8.60 0.000 intron (NM_015032, intron 19 of 34) intron (NM_015032, intron 19 of 34) 145343 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr10-6893 chr10 35460925 35461135 + 8.60 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 124156 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr7-8430 chr7 47038533 47038743 + 8.60 0.000 Intergenic Intergenic -341516 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr2-6135 chr2 225119819 225120029 + 8.60 0.000 Intergenic Intergenic -77456 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr17-4969 chr17 79829956 79830166 + 8.60 0.000 Intergenic Intergenic 6609 NR_146504 105371919 NR_146504 ENSG00000262772 LINC01977 - long intergenic non-protein coding RNA 1977 ncRNA chr4-2533 chr4 54252385 54252595 + 8.60 0.000 intron (NM_001347828, intron 2 of 23) intron (NM_001347828, intron 2 of 23) 18530 NM_001347830 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chr20-4528 chr20 63790874 63791084 + 8.60 0.000 intron (NM_001369741, intron 1 of 4) CpG-18126 14524 NM_025224 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr11-6018 chr11 24821465 24821675 + 8.60 0.000 intron (NM_001252010, intron 5 of 9) intron (NM_001252010, intron 5 of 9) 324517 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr10-3129 chr10 50622821 50623031 + 8.60 0.000 intron (NM_147156, intron 1 of 10) CpG 1030 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chrX-4176 chrX 33340840 33341050 + 8.60 0.000 Intergenic L2b|LINE|L2 -1557 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-7509 chr3 169508722 169508932 + 8.60 0.000 intron (NM_001366473, intron 1 of 15) intron (NM_001366473, intron 1 of 15) 60960 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr4-3967 chr4 185793638 185793848 + 8.60 0.000 intron (NM_021069, intron 1 of 20) MIRb|SINE|MIR 17151 NM_001145672 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr1-15353 chr1 147313704 147313914 + 8.60 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 70667 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr2-11569 chr2 720786 720996 + 8.60 0.000 Intergenic Intergenic -43485 NM_001352680 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr1-12054 chr1 116464141 116464351 + 8.60 0.000 intron (NR_125973, intron 2 of 3) AluJb|SINE|Alu 14580 NR_125972 101929023 Hs.668091 NR_125972 ENSG00000233154 LINC01762 - long intergenic non-protein coding RNA 1762 ncRNA chr11-9982 chr11 78050999 78051209 + 8.60 0.000 intron (NM_001203262, intron 1 of 2) MIR3|SINE|MIR -4913 NM_001282406 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr22-3691 chr22 24356110 24356320 + 8.60 0.000 intron (NM_015330, intron 11 of 16) L1MCc|LINE|L1 14107 NM_001254733 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr4-7685 chr4 87622401 87622611 + 8.60 0.000 Intergenic MER1B|DNA|hAT-Charlie 13977 NM_014208 1834 Hs.678914 NM_014208 ENSG00000152591 DSPP DFNA39|DGI1|DMP3|DPP|DSP dentin sialophosphoprotein protein-coding chr10-1852 chr10 69427268 69427478 + 8.60 0.000 Intergenic (TGA)n|Simple_repeat|Simple_repeat -10455 NM_001057 6865 Hs.88372 NM_001057 ENSG00000075073 TACR2 NK2R|NKNAR|SKR|TAC2R tachykinin receptor 2 protein-coding chr16-4489 chr16 57290048 57290258 + 8.60 0.000 Intergenic Intergenic -5481 NM_015993 51090 Hs.632215 NM_015993 ENSG00000102934 PLLP PMLP|TM4SF11 plasmolipin protein-coding chr8-5194 chr8 105717038 105717248 + 8.60 0.000 intron (NM_001362837, intron 5 of 7) intron (NM_001362837, intron 5 of 7) 343360 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr8-7236 chr8 127639409 127639619 + 8.60 0.000 Intergenic Intergenic 94453 NR_117102 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLO7|CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility 11 ncRNA chr11-9655 chr11 66875460 66875670 + 8.60 0.000 intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) 18501 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr1-3728 chr1 225653161 225653371 + 8.60 0.000 promoter-TSS (NM_018212) promoter-TSS (NM_018212) -143 NM_001008493 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr8-2758 chr8 115100793 115101003 + 8.60 0.000 Intergenic LTR91|LTR|ERVL 567115 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr2-11130 chr2 136361334 136361544 + 8.60 0.000 Intergenic Intergenic -243284 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr6-4486 chr6 36634148 36634358 + 8.60 0.000 Intergenic Intergenic -11741 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr7-2612 chr7 458506 458716 + 8.60 0.000 Intergenic Intergenic 61233 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr6-8421 chr6 151335880 151336090 + 8.60 0.000 intron (NM_144497, intron 1 of 2) L1PB4|LINE|L1 -5721 NM_001370346 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr14-2819 chr14 23223473 23223683 + 8.60 0.000 intron (NM_001370218, intron 2 of 15) AluY|SINE|Alu -14358 NM_001282322 100507650 NM_001282322 ENSG00000215277 RNF212B C14orf164 ring finger protein 212B protein-coding chr16-5936 chr16 3658004 3658214 + 8.60 0.000 TTS (NM_005223) TTS (NM_005223) 3405 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr7-2486 chr7 6534514 6534724 + 8.60 0.000 intron (NM_001145118, intron 2 of 21) MER3|DNA|hAT-Charlie 16817 NM_001145118 392862 Hs.512174 NM_001145118 ENSG00000215045 GRID2IP DELPHILIN Grid2 interacting protein protein-coding chr17-4334 chr17 2768164 2768374 + 8.60 0.000 Intergenic L1ME4b|LINE|L1 -8489 NM_001330058 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr8-4354 chr8 101101714 101101924 + 8.60 0.000 Intergenic AluSx3|SINE|Alu 49765 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr16-2847 chr16 85227218 85227428 + 8.60 0.000 Intergenic L2c|LINE|L2 19527 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr17-2359 chr17 68628292 68628502 + 8.60 0.000 intron (NR_110825, intron 1 of 4) HAL1|LINE|L1 243 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr11-5342 chr11 62516497 62516707 + 8.60 0.000 3' UTR (NM_001620, exon 5 of 5) 3' UTR (NM_001620, exon 5 of 5) 29062 NM_001346446 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding chr5-5126 chr5 103302990 103303200 + 8.60 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 43671 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr7-9378 chr7 130787292 130787502 + 8.60 0.000 Intergenic Intergenic -53364 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr3-10426 chr3 131388055 131388265 + 8.60 0.000 non-coding (NR_033268, exon 2 of 2) non-coding (NR_033268, exon 2 of 2) 6386 NM_152395 131870 Hs.282050 NM_152395 ENSG00000198585 NUDT16 - nudix hydrolase 16 protein-coding chr6-3616 chr6 109902229 109902439 + 8.60 0.000 Intergenic Intergenic -75922 NM_001286099 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr20-1568 chr20 911504 911714 + 8.60 0.000 intron (NM_015985, intron 1 of 8) (GAGACA)n|Simple_repeat|Simple_repeat 4725 NM_015985 51378 Hs.278973 NM_015985 ENSG00000101280 ANGPT4 ANG3|ANG4 angiopoietin 4 protein-coding chr12-4521 chr12 24499783 24499993 + 8.60 0.000 intron (NM_152989, intron 1 of 17) intron (NM_152989, intron 1 of 17) 62603 NM_001261414 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr5-4728 chr5 43638257 43638467 + 8.60 0.000 intron (NM_012343, intron 7 of 21) intron (NM_012343, intron 7 of 21) -35132 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr1-10752 chr1 199742666 199742876 + 8.60 0.000 Intergenic Intergenic -284939 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr20-3336 chr20 24212158 24212368 + 8.60 0.000 non-coding (NR_040102, exon 2 of 4) non-coding (NR_040102, exon 2 of 4) 12496 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr5-3388 chr5 141880137 141880347 + 8.60 0.000 Intergenic Intergenic -1832 NM_002587 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr5-762 chr5 178232189 178232399 + 8.60 0.000 non-coding (NR_103509, exon 1 of 10) non-coding (NR_103509, exon 1 of 10) 508 NM_153373 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding KZ208921.1-2 KZ208921.1 55678 55888 + 8.60 0.000 NA NA NA NA chrX-5084 chrX 126150878 126151088 + 8.60 0.000 Intergenic L1PA10|LINE|L1 15306 NM_001013628 340578 Hs.181867 NM_001013628 ENSG00000198354 DCAF12L2 WDR40C DDB1 and CUL4 associated factor 12 like 2 protein-coding chr3-4977 chr3 14730995 14731205 + 8.60 0.000 intron (NM_001184957, intron 12 of 16) L1ME1|LINE|L1 55959 NM_032137 84077 Hs.661452 NM_032137 ENSG00000131379 C3orf20 - chromosome 3 open reading frame 20 protein-coding chr8-3137 chr8 69631756 69631966 + 8.60 0.000 intron (NR_156414, intron 18 of 20) L2c|LINE|L2 38961 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr5-8354 chr5 120872234 120872444 + 8.60 0.000 Intergenic Intergenic 340875 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chrX-1905 chrX 138240443 138240653 + 8.60 0.000 Intergenic Intergenic 427245 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr10-2229 chr10 76991702 76991912 + 8.60 0.000 intron (NM_001322838, intron 19 of 29) intron (NM_001322838, intron 19 of 29) 103763 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr1-4678 chr1 220151596 220151806 + 8.60 0.000 exon (NM_012414, exon 34 of 35) exon (NM_012414, exon 34 of 35) -33460 NR_029711 406969 NR_029711 ENSG00000207624 MIR194-1 MIRN194-1|mir-194-1 microRNA 194-1 ncRNA chr20-1628 chr20 17349243 17349453 + 8.60 0.000 intron (NM_002594, intron 2 of 11) intron (NM_002594, intron 2 of 11) 122308 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr16-3583 chr16 69564246 69564456 + 8.60 0.000 Intergenic Intergenic 1517 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr15-4463 chr15 48414234 48414444 + 8.60 0.000 intron (NM_000138, intron 64 of 65) intron (NM_000138, intron 64 of 65) 82142 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr2-10398 chr2 183248900 183249110 + 8.60 0.000 Intergenic Intergenic 124562 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr3-9893 chr3 83282313 83282523 + 8.60 0.000 Intergenic L1MA4|LINE|L1 1296276 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr2-5121 chr2 20371667 20371877 + 8.60 0.000 Intergenic MSTB|LTR|ERVL-MaLR -19519 NM_001352925 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr15-2280 chr15 58078837 58079047 + 8.60 0.000 Intergenic Intergenic -13019 NM_001206897 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr3-5946 chr3 45410055 45410265 + 8.60 0.000 intron (NM_001368263, intron 3 of 20) intron (NM_001368263, intron 3 of 20) 21584 NM_015340 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr1-8486 chr1 121558583 121558793 + 8.60 0.000 intron (NR_003955, intron 3 of 7) intron (NR_003955, intron 3 of 7) 39576 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo chr19-4627 chr19 14507810 14508020 + 8.60 0.000 Intergenic Intergenic 9947 NM_001300914 3337 Hs.515210 NM_006145 ENSG00000132002 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ heat shock protein family (Hsp40) member B1 protein-coding chr5-4359 chr5 170027624 170027834 + 8.60 0.000 promoter-TSS (NR_039609) promoter-TSS (NR_039609) -759 NR_039609 100616498 NR_039609 ENSG00000263831 MIR378E mir-378e microRNA 378e ncRNA chr7-7170 chr7 5848992 5849202 + 8.60 0.000 non-coding (NR_023382, exon 6 of 7) non-coding (NR_023382, exon 6 of 7) 25937 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr14-3193 chr14 72433637 72433847 + 8.60 0.000 intron (NM_001370288, intron 3 of 16) MIR|SINE|MIR -83078 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr20-1616 chr20 12114026 12114236 + 8.60 0.000 Intergenic MER51A|LTR|ERV1 196238 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr6-3501 chr6 22877985 22878195 + 8.60 0.000 Intergenic Intergenic -160166 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr19-4630 chr19 14585244 14585454 + 8.60 0.000 intron (NM_207390, intron 2 of 12) intron (NM_207390, intron 2 of 12) 2265 NM_207390 388512 Hs.567933 NM_207390 ENSG00000187912 CLEC17A - C-type lectin domain containing 17A protein-coding chr5-7419 chr5 28244556 28244766 + 8.60 0.000 Intergenic Intergenic 43004 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chrX-1468 chrX 113785419 113785629 + 8.60 0.000 intron (NR_131204, intron 1 of 2) L1M5|LINE|L1 152694 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr4-2329 chr4 145557717 145557927 + 8.60 0.000 exon (NM_001003688, exon 7 of 7) exon (NM_001003688, exon 7 of 7) -40628 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA chr10-9013 chr10 122036951 122037161 + 8.60 0.000 intron (NM_206862, intron 2 of 22) L2a|LINE|L2 47893 NM_206862 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr6-2098 chr6 157593662 157593872 + 8.60 0.000 intron (NM_024630, intron 3 of 8) intron (NM_024630, intron 3 of 8) 64635 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr4-4535 chr4 69851888 69852098 + 8.60 0.000 intron (NM_005420, intron 4 of 7) L1PA5|LINE|L1 8152 NM_005420 6783 Hs.479898 NM_005420 ENSG00000109193 SULT1E1 EST|EST-1|ST1E1|STE sulfotransferase family 1E member 1 protein-coding chr12-6164 chr12 9245749 9245959 + 8.60 0.000 intron (NR_137432, intron 2 of 4) intron (NR_137432, intron 2 of 4) 5851 NR_137435 100499405 Hs.182314 NR_036466 ENSG00000237248 LINC00987 - long intergenic non-protein coding RNA 987 ncRNA chr13-3968 chr13 62880754 62880964 + 8.60 0.000 Intergenic L1PA16|LINE|L1 -73500 NR_120403 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr1-9210 chr1 22349096 22349306 + 8.60 0.000 Intergenic AluSz|SINE|Alu 82962 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr10-6201 chr10 32368201 32368411 + 8.60 0.000 intron (NR_104163, intron 1 of 1) intron (NR_104163, intron 1 of 1) 10463 NM_001282391 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr1-14463 chr1 47458983 47459193 + 8.60 0.000 Intergenic Intergenic -21771 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr22-3533 chr22 11577747 11577957 + 8.60 0.000 Intergenic L1ME4a|LINE|L1 -319554 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr18-2465 chr18 41164104 41164314 + 8.60 0.000 Intergenic L2c|LINE|L2 356468 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr20-4044 chr20 37226997 37227207 + 8.60 0.000 intron (NM_001135771, intron 10 of 16) intron (NM_001135771, intron 10 of 16) 29806 NM_021081 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chr1-8137 chr1 11205227 11205437 + 8.60 0.000 intron (NM_004958, intron 25 of 57) MIR|SINE|MIR 15977 NM_021146 10218 Hs.146559 NM_021146 ENSG00000171819 ANGPTL7 AngX|CDT6|dJ647M16.1 angiopoietin like 7 protein-coding chr3-3032 chr3 116339273 116339483 + 8.60 0.000 intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) -20646 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA chr3-4022 chr3 65729617 65729827 + 8.60 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -164094 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr9-4199 chr9 35826485 35826695 + 8.60 0.000 intron (NR_052026, intron 1 of 7) intron (NR_052026, intron 1 of 7) 2142 NM_001012446 392307 Hs.128075 NM_001012446 ENSG00000204930 FAM221B C9orf128 family with sequence similarity 221 member B protein-coding chrX-4104 chrX 24397115 24397325 + 8.60 0.000 Intergenic Intergenic 34537 NM_001136234 100130302 Hs.717243 NM_001136234 SUPT20HL1 FAM48B1|SPT20L SUPT20H like 1 protein-coding chr7-4355 chr7 52326182 52326392 + 8.60 0.000 Intergenic Intergenic -709346 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr8-7215 chr8 126556805 126557015 + 8.60 0.000 non-coding (NR_156466, exon 2 of 3) non-coding (NR_156466, exon 2 of 3) 1568 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr3-9356 chr3 46681039 46681249 + 8.60 0.000 intron (NR_135622, intron 13 of 24) intron (NR_135622, intron 13 of 24) 12535 NM_147129 259173 Hs.517937 NM_147129 ENSG00000178038 ALS2CL RN49018 ALS2 C-terminal like protein-coding chrX-3205 chrX 47697225 47697435 + 8.60 0.000 Intergenic MER89-int|LTR|ERV1 -9861 NR_033924 392459 Hs.562045 NR_033924 ENSG00000187893 CXXC1P1 CXorf25|NCRNA00236 CXXC finger protein 1 pseudogene 1 pseudo chr7-5107 chr7 3755170 3755380 + 8.60 0.000 intron (NM_152744, intron 4 of 44) MER89|LTR|ERV1 -374410 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr7-6605 chr7 99734096 99734306 + 8.60 0.000 intron (NM_000765, intron 1 of 12) intron (NM_000765, intron 1 of 12) 995 NM_000765 1551 Hs.111944 NM_000765 ENSG00000160870 CYP3A7 CP37|CYPIIIA7|P-450(HFL33)|P-450111A7|P450-HFLA cytochrome P450 family 3 subfamily A member 7 protein-coding chr7-9461 chr7 134850136 134850346 + 8.60 0.000 intron (NM_033157, intron 2 of 14) intron (NM_033157, intron 2 of 14) -41159 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr19-2572 chr19 918584 918794 + 8.60 0.000 intron (NM_032551, intron 2 of 4) CpG-12951 1356 NM_032551 84634 Hs.208229 NM_032551 ENSG00000116014 KISS1R AXOR12|CPPB1|GPR54|HH8|HOT7T175|KISS-1R KISS1 receptor protein-coding chr4-8656 chr4 177369621 177369831 + 8.60 0.000 Intergenic MIR|SINE|MIR 59852 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr1-16589 chr1 236379987 236380197 + 8.60 0.000 Intergenic Intergenic -14194 NM_145861 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr1-6101 chr1 145691206 145691416 + 8.60 0.000 intron (NM_001371361, intron 1 of 7) intron (NM_001371361, intron 1 of 7) 16057 NM_001201325 5174 Hs.444751 NM_002614 ENSG00000174827 PDZK1 CAP70|CLAMP|NHERF-3|NHERF3|PDZD1 PDZ domain containing 1 protein-coding chr12-4054 chr12 50592105 50592315 + 8.60 0.000 intron (NM_173602, intron 1 of 37) AluJo|SINE|Alu 87225 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr1-7974 chr1 201841466 201841676 + 8.60 0.000 intron (NM_018085, intron 1 of 23) L1MC4a|LINE|L1 -12012 NR_046696 100873949 Hs.604842 NR_046696 ENSG00000231871 IPO9-AS1 - IPO9 antisense RNA 1 ncRNA chr7-2857 chr7 110111624 110111834 + 8.60 0.000 Intergenic L1MB7|LINE|L1 -151516 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr8-4322 chr8 99481296 99481506 + 8.60 0.000 intron (NM_017890, intron 24 of 61) intron (NM_017890, intron 24 of 61) 55329 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA chr18-2832 chr18 6814997 6815207 + 8.60 0.000 intron (NM_001366230, intron 1 of 17) intron (NM_001366230, intron 1 of 17) -19383 NM_001010000 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr14-1985 chr14 50336120 50336330 + 8.60 0.000 intron (NM_001282236, intron 7 of 8) intron (NM_001282236, intron 7 of 8) 23901 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr14-1546 chr14 64824591 64824801 + 8.60 0.000 intron (NM_001355436, intron 1 of 35) (CA)n|Simple_repeat|Simple_repeat -1316 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr6-6138 chr6 166754074 166754284 + 8.60 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 108346 NM_001318937 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr3-4979 chr3 14914958 14915168 + 8.60 0.000 intron (NM_152536, intron 11 of 19) MER58A|DNA|hAT-Charlie 32442 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr1-4975 chr1 55277593 55277803 + 8.60 0.000 Intergenic Intergenic 52057 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr20-2925 chr20 64280438 64280648 + 8.60 0.000 Intergenic Intergenic -9842 NR_040415 140849 Hs.745565 NR_040415 LINC00266-1 C20orf69|NCRNA00266|NCRNA00266-1|bA476I15.3 long intergenic non-protein coding RNA 266-1 ncRNA chr4-4512 chr4 62057580 62057790 + 8.60 0.000 intron (NM_001371343, intron 23 of 23) AluSz|SINE|Alu 104080 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr4-3829 chr4 122039276 122039486 + 8.60 0.000 Intergenic Intergenic -87321 NM_001130698 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr10-4393 chr10 50941202 50941412 + 8.60 0.000 Intergenic L2b|LINE|L2 -49581 NM_001098512 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr14-4356 chr14 24401745 24401955 + 8.60 0.000 intron (NM_025081, intron 2 of 8) MIR3|SINE|MIR 2847 NM_025081 57523 Hs.288348 NM_025081 ENSG00000205978 NYNRIN CGIN1|KIAA1305 NYN domain and retroviral integrase containing protein-coding chr10-5097 chr10 47312193 47312403 + 8.60 0.000 intron (NM_004962, intron 2 of 2) intron (NM_004962, intron 2 of 2) -10156 NM_016204 2658 Hs.279463 NM_016204 ENSG00000263761 GDF2 BMP-9|BMP9|HHT5 growth differentiation factor 2 protein-coding chr12-5840 chr12 41774351 41774561 + 8.60 0.000 Intergenic Intergenic 10267 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr5-8448 chr5 129579438 129579648 + 8.60 0.000 intron (NM_133638, intron 7 of 22) L1PA7|LINE|L1 -118854 NR_125748 103689846 Hs.628635 NR_125748 ENSG00000249421 ADAMTS19-AS1 - ADAMTS19 antisense RNA 1 ncRNA chr14-1875 chr14 84958472 84958682 + 8.60 0.000 Intergenic Intergenic -313355 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr7-9058 chr7 103827805 103828015 + 8.60 0.000 intron (NM_005045, intron 3 of 64) intron (NM_005045, intron 3 of 64) 161606 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr15-2818 chr15 38721611 38721821 + 8.60 0.000 Intergenic CR1-16_AMi|LINE|CR1 25118 NR_160786 chr3-2341 chr3 141051219 141051429 + 8.60 0.000 promoter-TSS (NM_080862) promoter-TSS (NM_080862) -23 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr19-4541 chr19 9745987 9746197 + 8.60 0.000 Intergenic HERVH-int|LTR|ERV1 22646 NM_001077624 162993 Hs.665717 NM_001077624 ENSG00000196605 ZNF846 - zinc finger protein 846 protein-coding chr1-8302 chr1 44447179 44447389 + 8.60 0.000 intron (NM_001319957, intron 1 of 13) MIRb|SINE|MIR 23283 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr9-7036 chr9 122351149 122351359 + 8.60 0.000 Intergenic L2c|LINE|L2 -19279 NM_001271166 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr6-5063 chr6 114154135 114154345 + 8.60 0.000 intron (NR_125845, intron 6 of 9) intron (NR_125845, intron 6 of 9) -91363 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr9-2996 chr9 91824727 91824937 + 8.60 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 125396 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr3-6297 chr3 74196245 74196455 + 8.60 0.000 Intergenic L1PA4|LINE|L1 324790 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr7-8432 chr7 47191039 47191249 + 8.60 0.000 Intergenic Intergenic 273659 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr12-3759 chr12 49419645 49419855 + 8.60 0.000 intron (NM_001293285, intron 3 of 14) intron (NM_001293285, intron 3 of 14) 30576 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr18-1277 chr18 59202410 59202620 + 8.60 0.000 Intergenic Intergenic -17643 NM_001012513 2922 Hs.153444 NM_002091 ENSG00000134443 GRP BN|GRP-10|preproGRP|proGRP gastrin releasing peptide protein-coding chr6-4901 chr6 93795456 93795666 + 8.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR 77258 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr4-5588 chr4 180753062 180753272 + 8.60 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 405982 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr22-2357 chr22 43674183 43674393 + 8.60 0.000 intron (NM_198856, intron 11 of 29) L2a|LINE|L2 138017 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr3-6246 chr3 67992082 67992292 + 8.60 0.000 intron (NM_001252216, intron 1 of 4) MLT1I|LTR|ERVL-MaLR 595 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr3-3705 chr3 171704227 171704437 + 8.60 0.000 intron (NM_002662, intron 11 of 26) L1MD2|LINE|L1 106151 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr11-8530 chr11 126892150 126892360 + 8.60 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -48491 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr1-15002 chr1 91924291 91924501 + 8.60 0.000 Intergenic MER21-int|LTR|ERVL -18394 NM_001195684 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr10-3319 chr10 3890196 3890406 + 8.60 0.000 Intergenic Intergenic 56351 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr3-2077 chr3 191329232 191329442 + 8.60 0.000 promoter-TSS (NM_174908) promoter-TSS (NM_174908) -57 NM_178335 152137 Hs.478682 NM_174908 ENSG00000152492 CCDC50 C3orf6|DFNA44|YMER coiled-coil domain containing 50 protein-coding chr18-1642 chr18 56942130 56942340 + 8.60 0.000 intron (NM_015285, intron 25 of 27) LTR75_1|LTR|ERV1 129884 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr11-6874 chr11 102186697 102186907 + 8.60 0.000 intron (NM_001130145, intron 4 of 8) intron (NM_001130145, intron 4 of 8) 74354 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr8-4908 chr8 92133020 92133230 + 8.60 0.000 Intergenic Intergenic -29740 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr2-12978 chr2 105180629 105180839 + 8.60 0.000 Intergenic Intergenic 36621 NR_136172 105373984 Hs.570237 NR_136172 ENSG00000226508 LINC01918 - long intergenic non-protein coding RNA 1918 ncRNA chr8-7125 chr8 120379585 120379795 + 8.60 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 65460 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr15-2819 chr15 38895844 38896054 + 8.60 0.000 Intergenic Intergenic 199351 NR_160786 chr5-4688 chr5 38993174 38993384 + 8.60 0.000 intron (NM_001285439, intron 6 of 38) intron (NM_001285439, intron 6 of 38) 81120 NM_001285440 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr2-8460 chr2 122247876 122248086 + 8.60 0.000 Intergenic MIR|SINE|MIR 492330 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr9-4870 chr9 3121752 3121962 + 8.60 0.000 Intergenic Intergenic -59732 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr1-14203 chr1 34599373 34599583 + 8.60 0.000 Intergenic L2c|LINE|L2 70216 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chrX-3258 chrX 82335645 82335855 + 8.60 0.000 Intergenic MER67C|LTR|ERV1 1133648 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding KI270719.1-4 KI270719.1 163210 163420 + 8.60 0.000 NA NA NA NA chr10-4097 chr10 61397868 61398078 + 8.60 0.000 Intergenic Intergenic -54666 NR_120643 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr19-3236 chr19 964909 965119 + 8.60 0.000 exon (NM_005224, exon 6 of 9) exon (NM_005224, exon 6 of 9) -19314 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr5-3595 chr5 96572893 96573103 + 8.60 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -89039 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr3-8663 chr3 178955253 178955463 + 8.60 0.000 Intergenic Intergenic -94953 NR_126560 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chrX-5460 chrX 154778921 154779131 + 8.60 0.000 3' UTR (NM_002436, exon 12 of 12) 3' UTR (NM_002436, exon 12 of 12) 4028 NR_002984 677835 Hs.745526 NR_002984 ENSG00000206693 SNORA56 ACA56 small nucleolar RNA, H/ACA box 56 snoRNA chr7-1973 chr7 140267279 140267489 + 8.60 0.000 Intergenic AluSz|SINE|Alu 90123 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr22-3743 chr22 26549098 26549308 + 8.60 0.000 intron (NM_001362923, intron 1 of 7) MIRb|SINE|MIR 6120 NR_031615 100313914 NR_031615 ENSG00000221760 MIR548J MIRN548J|hsa-mir-548j microRNA 548j ncRNA chr2-11499 chr2 235900791 235901001 + 8.60 0.000 intron (NM_001037131, intron 10 of 17) intron (NM_001037131, intron 10 of 17) 267490 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr11-3981 chr11 2278132 2278342 + 8.60 0.000 Intergenic L1MEc|LINE|L1 -7285 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr4-5826 chr4 101475375 101475585 + 8.60 0.000 Intergenic HAL1|LINE|L1 127703 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr3-8765 chr3 2968358 2968568 + 8.60 0.000 intron (NM_175607, intron 13 of 24) intron (NM_175607, intron 13 of 24) 76248 NM_001206956 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr12-5835 chr12 40105255 40105465 + 8.60 0.000 exon (NM_052885, exon 1 of 10) exon (NM_052885, exon 1 of 10) 721 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr4-8229 chr4 138518169 138518379 + 8.60 0.000 Intergenic Intergenic 208563 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr11-7429 chr11 113913804 113914014 + 8.60 0.000 intron (NM_006028, intron 2 of 8) MSTC|LTR|ERVL-MaLR 5068 NM_001363563 9177 Hs.241377 NM_006028 ENSG00000149305 HTR3B 5-HT3B 5-hydroxytryptamine receptor 3B protein-coding chr11-6129 chr11 39735507 39735717 + 8.60 0.000 Intergenic HERVH-int|LTR|ERV1 557518 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr5-1972 chr5 127517531 127517741 + 8.60 0.000 promoter-TSS (NM_001286808) promoter-TSS (NM_001286808) -4 NM_001286808 133619 Hs.483259 NM_130809 ENSG00000164244 PRRC1 - proline rich coiled-coil 1 protein-coding chr16-6711 chr16 71882491 71882701 + 8.60 0.000 intron (NM_001318238, intron 2 of 7) intron (NM_001318238, intron 2 of 7) 945 NM_017530 55565 Hs.744055 NM_017530 ENSG00000102984 ZNF821 - zinc finger protein 821 protein-coding chr9-2105 chr9 91717486 91717696 + 8.60 0.000 Intergenic Intergenic -81246 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr5-1303 chr5 40679527 40679737 + 8.60 0.000 promoter-TSS (NM_000958) promoter-TSS (NM_000958) -283 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr3-6430 chr3 102269382 102269592 + 8.60 0.000 Intergenic Intergenic 105782 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr8-3660 chr8 13497567 13497777 + 8.60 0.000 intron (NM_024767, intron 2 of 4) intron (NM_024767, intron 2 of 4) 17179 NM_182643 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr7-6092 chr7 117619449 117619659 + 8.60 0.000 intron (NM_000492, intron 21 of 26) intron (NM_000492, intron 21 of 26) -54878 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr4-8246 chr4 139336832 139337042 + 8.60 0.000 exon (NM_057175, exon 3 of 20) exon (NM_057175, exon 3 of 20) -34386 NM_001184990 4717 Hs.84549 NM_002494 ENSG00000109390 NDUFC1 KFYI NADH:ubiquinone oxidoreductase subunit C1 protein-coding chrX-5078 chrX 125532445 125532655 + 8.60 0.000 Intergenic L1MA1|LINE|L1 212679 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr4-3080 chr4 149113528 149113738 + 8.60 0.000 Intergenic Intergenic -40662 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr6-5874 chr6 40521110 40521320 + 8.60 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 66149 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr8-3057 chr8 15537549 15537759 + 8.60 0.000 Intergenic Intergenic -2433 NM_178234 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr5-2991 chr5 933024 933234 + 8.60 0.000 Intergenic Intergenic 40245 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr16-4982 chr16 4748944 4749154 + 8.60 0.000 3' UTR (NM_021646, exon 6 of 6) 3' UTR (NM_021646, exon 6 of 6) 14512 NM_139170 146562 Hs.602738 NM_139170 ENSG00000166246 C16orf71 - chromosome 16 open reading frame 71 protein-coding chr7-4400 chr7 95373498 95373708 + 8.60 0.000 intron (NM_000940, intron 3 of 8) intron (NM_000940, intron 3 of 8) 22772 NM_000940 5446 Hs.440967 NM_000940 ENSG00000105852 PON3 - paraoxonase 3 protein-coding chrX-2680 chrX 118017405 118017615 + 8.60 0.000 intron (NM_001168303, intron 1 of 6) L2b|LINE|L2 -32097 NM_001168299 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr6-8061 chr6 122137616 122137826 + 8.60 0.000 Intergenic Intergenic -261830 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr14-3806 chr14 67421951 67422161 + 8.60 0.000 Intergenic MER74B|LTR|ERVL -9891 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr6-7759 chr6 93835071 93835281 + 8.60 0.000 Intergenic HERVH-int|LTR|ERV1 116873 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr13-1611 chr13 46553866 46554076 + 8.60 0.000 intron (NM_001164213, intron 1 of 18) CpG 801 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr8-2498 chr8 14733350 14733560 + 8.60 0.000 intron (NM_139167, intron 1 of 7) MER74A|LTR|ERVL 120055 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr21-963 chr21 44920629 44920839 + 8.60 0.000 promoter-TSS (NR_038314) promoter-TSS (NR_038314) 165 NM_001303238 3689 Hs.375957 NM_000211 ENSG00000160255 ITGB2 CD18|LAD|LCAMB|LFA-1|MAC-1|MF17|MFI7 integrin subunit beta 2 protein-coding chrX-1921 chrX 153162111 153162321 + 8.60 0.000 Intergenic Intergenic -17068 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chrX-1457 chrX 97355842 97356052 + 8.60 0.000 intron (NM_007309, intron 24 of 26) intron (NM_007309, intron 24 of 26) 208588 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr8-5542 chr8 70949971 70950181 + 8.60 0.000 Intergenic MIR|SINE|MIR 280737 NM_001287259 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr20-1371 chr20 48576507 48576717 + 8.60 0.000 Intergenic Intergenic 216701 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr1-2918 chr1 25128007 25128217 + 8.60 0.000 Intergenic Intergenic 104390 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr9-5613 chr9 117185205 117185415 + 8.60 0.000 intron (NM_001365068, intron 3 of 22) intron (NM_001365068, intron 3 of 22) -4109 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr9-5013 chr9 25651756 25651966 + 8.60 0.000 Intergenic Intergenic 26997 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr14-3119 chr14 66634954 66635164 + 8.60 0.000 intron (NM_001024218, intron 1 of 21) MLT1G1|LTR|ERVL-MaLR 127652 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr1-6547 chr1 30166440 30166650 + 8.60 0.000 Intergenic L1ME1|LINE|L1 -128933 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA KZ208915.1-3 KZ208915.1 1326561 1326771 + 8.60 0.000 NA NA NA NA chr9-7173 chr9 135241092 135241302 + 8.60 0.000 Intergenic Intergenic 59588 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chr5-7618 chr5 45122813 45123023 + 8.60 0.000 Intergenic Intergenic 313971 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr2-11011 chr2 103713537 103713747 + 8.60 0.000 Intergenic L1MA4A|LINE|L1 694690 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr19-2560 chr19 52008029 52008239 + 8.60 0.000 promoter-TSS (NM_001321317) promoter-TSS (NM_001321317) 77 NM_001199324 284370 Hs.368355 NM_198480 ENSG00000197619 ZNF615 - zinc finger protein 615 protein-coding chrX-1483 chrX 135915813 135916023 + 8.60 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 22202 NM_018666 55511 Hs.195292 NM_018666 ENSG00000181433 SAGE1 CT14|SAGE sarcoma antigen 1 protein-coding chr1-10687 chr1 187105787 187105997 + 8.60 0.000 intron (NR_126347, intron 1 of 3) L2c|LINE|L2 13050 NR_126347 104169671 NR_126347 ENSG00000230426 LINC01036 - long intergenic non-protein coding RNA 1036 ncRNA chr12-4191 chr12 95700351 95700561 + 8.60 0.000 intron (NM_001329701, intron 5 of 9) MER5A|DNA|hAT-Charlie 51201 NR_077225 100132594 Hs.676211 NR_077225 ENSG00000257150 PGAM1P5 - phosphoglycerate mutase 1 pseudogene 5 pseudo chr17-5436 chr17 39090480 39090690 + 8.60 0.000 intron (NM_020405, intron 7 of 13) MIRb|SINE|MIR 33566 NR_036551 100131347 Hs.676510 NR_036551 ENSG00000263818 RDM1P5 - RDM1 pseudogene 5 pseudo chr9-2650 chr9 34387318 34387528 + 8.60 0.000 intron (NM_032596, intron 1 of 6) intron (NM_032596, intron 1 of 6) -5834 NM_147169 84688 Hs.50334 NM_032596 ENSG00000164972 C9orf24 CBE1|NYD-SP22|SMRP1|bA573M23.4 chromosome 9 open reading frame 24 protein-coding chr1-12754 chr1 68529129 68529339 + 8.60 0.000 intron (NR_110671, intron 1 of 2) intron (NR_110671, intron 1 of 2) -32152 NM_017779 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding chr4-5861 chr4 121363283 121363493 + 8.60 0.000 intron (NM_198179, intron 1 of 5) intron (NM_198179, intron 1 of 5) 17630 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr8-6330 chr8 49439291 49439501 + 8.60 0.000 Intergenic LOR1-int|LTR|ERV1 72784 NR_134294 100507464 Hs.245745 NR_134294 ENSG00000253380 LOC100507464 - uncharacterized LOC100507464 ncRNA chr14-2830 chr14 24756647 24756857 + 8.60 0.000 Intergenic L1PA6|LINE|L1 -122562 NR_144343 3002 Hs.1051 NM_004131 ENSG00000100453 GZMB C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B protein-coding chrX-1741 chrX 41383126 41383336 + 8.60 0.000 Intergenic Intergenic 49065 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr17-4344 chr17 4592916 4593126 + 8.60 0.000 exon (NM_198501, exon 3 of 8) exon (NM_198501, exon 3 of 8) 8492 NM_001114974 342527 Hs.441709 NM_198501 ENSG00000188176 SMTNL2 - smoothelin like 2 protein-coding chr7-8276 chr7 38636760 38636970 + 8.60 0.000 Intergenic Intergenic -5298 NM_139316 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr18-1008 chr18 46260643 46260853 + 8.60 0.000 intron (NM_001008239, intron 3 of 3) intron (NM_001008239, intron 3 of 3) -73270 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr3-8297 chr3 59323585 59323795 + 8.60 0.000 Intergenic A-rich|Low_complexity|Low_complexity -273658 NM_001351534 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr7-9224 chr7 118935763 118935973 + 8.60 0.000 Intergenic Intergenic 711164 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr9-2985 chr9 74830668 74830878 + 8.60 0.000 intron (NM_017662, intron 6 of 38) (T)n|Simple_repeat|Simple_repeat 56574 NM_001177311 140803 Hs.272225 NM_017662 ENSG00000119121 TRPM6 CHAK2|HMGX|HOMG|HOMG1|HSH transient receptor potential cation channel subfamily M member 6 protein-coding chr15-2339 chr15 26135594 26135804 + 8.60 0.000 Intergenic Intergenic 19886 NR_038851 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr13-4477 chr13 113270502 113270712 + 8.60 0.000 Intergenic AluSx3|SINE|Alu 7687 NR_107042 102465874 NR_107042 ENSG00000277942 MIR8075 hsa-mir-8075 microRNA 8075 ncRNA chr3-3954 chr3 50989023 50989233 + 8.60 0.000 intron (NM_004947, intron 5 of 52) L1PA12|LINE|L1 314048 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr2-6282 chr2 55006340 55006550 + 8.60 0.000 intron (NM_153828, intron 1 of 6) intron (NM_153828, intron 1 of 6) 3827 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr7-4965 chr7 148739173 148739383 + 8.60 0.000 intron (NM_001370660, intron 2 of 21) L4_B_Mam|LINE|RTE-X 39568 NM_001370664 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr19-3397 chr19 15339643 15339853 + 8.60 0.000 Intergenic AluJb|SINE|Alu -7209 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr14-1190 chr14 68125212 68125422 + 8.60 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 301725 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chrX-4044 chrX 18072940 18073150 + 8.60 0.000 intron (NR_133641, intron 1 of 4) intron (NR_133641, intron 1 of 4) 31599 NR_133641 105373144 NR_133641 ENSG00000225882 LINC01456 - long intergenic non-protein coding RNA 1456 ncRNA chr16-5545 chr16 27941579 27941789 + 8.60 0.000 intron (NM_001109763, intron 2 of 6) L1MB3|LINE|L1 -53527 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr1-4849 chr1 27975299 27975509 + 8.60 0.000 intron (NM_001282562, intron 16 of 16) AluJo|SINE|Alu 15942 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr3-2237 chr3 45645038 45645248 + 8.60 0.000 intron (NM_014240, intron 2 of 7) intron (NM_014240, intron 2 of 7) 43739 NR_033947 644714 Hs.712889 NR_033947 LIMD1-AS1 - LIMD1 antisense RNA 1 ncRNA chr2-6590 chr2 234378141 234378351 + 8.60 0.000 Intergenic Intergenic 76349 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr2-13291 chr2 129193638 129193848 + 8.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 80148 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr18-871 chr18 38256675 38256885 + 8.60 0.000 Intergenic Intergenic 599645 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr13-4347 chr13 102898710 102898920 + 8.60 0.000 Intergenic Intergenic 18716 NR_026965 121952 Hs.660773 NR_026965 ENSG00000250878 METTL21EP METTL21CP1 methyltransferase like 21E, pseudogene pseudo chr3-5020 chr3 28505024 28505234 + 8.60 0.000 intron (NM_001040432, intron 6 of 9) intron (NM_001040432, intron 6 of 9) -70149 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr1-8671 chr1 211135406 211135616 + 8.60 0.000 Intergenic Intergenic -1363 NM_172362 3756 Hs.553187 NM_002238 ENSG00000143473 KCNH1 EAG|EAG1|Kv10.1|TMBTS|ZLS1|h-eag|hEAG1 potassium voltage-gated channel subfamily H member 1 protein-coding chr8-4660 chr8 136179260 136179470 + 8.60 0.000 Intergenic Intergenic -351433 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr13-1665 chr13 74562434 74562644 + 8.60 0.000 Intergenic Intergenic 9696 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr2-5562 chr2 168531078 168531288 + 8.60 0.000 intron (NM_001256126, intron 1 of 10) Plat_L3|LINE|CR1 -51760 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr17-4729 chr17 34768468 34768678 + 8.60 0.000 Intergenic L2a|LINE|L2 187824 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr15-3996 chr15 55176901 55177111 + 8.60 0.000 Intergenic MIRb|SINE|MIR 19935 NM_016304 51187 Hs.274772 NM_016304 ENSG00000137876 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding chr1-6083 chr1 109872519 109872729 + 8.60 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -38225 NM_172210 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr4-4170 chr4 8941644 8941854 + 8.60 0.000 Intergenic SATR1|Satellite|Satellite -69910 NM_001306142 3166 Hs.104134 NM_018942 ENSG00000215612 HMX1 H6|NKX5-3 H6 family homeobox 1 protein-coding chr20-3911 chr20 32378575 32378785 + 8.60 0.000 intron (NM_015338, intron 3 of 11) intron (NM_015338, intron 3 of 11) 19615 NM_001363734 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chr6-6389 chr6 77257982 77258192 + 8.60 0.000 Intergenic MLT1B-int|LTR|ERVL-MaLR 205935 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr13-2042 chr13 48526915 48527125 + 8.60 0.000 intron (NM_001352426, intron 1 of 12) intron (NM_001352426, intron 1 of 12) 6060 NR_147985 1102 Hs.652712 NM_001268 ENSG00000136161 RCBTB2 CHC1L|RLG RCC1 and BTB domain containing protein 2 protein-coding chr14-1808 chr14 35687496 35687706 + 8.60 0.000 intron (NM_014990, intron 17 of 40) intron (NM_014990, intron 17 of 40) 75330 NR_135620 107399303 Hs.742611 NR_135620 SNORA101B ZL4 small nucleolar RNA, H/ACA box 101B snoRNA chr8-7124 chr8 120033624 120033834 + 8.60 0.000 intron (NM_022783, intron 8 of 8) intron (NM_022783, intron 8 of 8) -91373 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr9-7721 chr9 73367906 73368116 + 8.60 0.000 Intergenic LTR33|LTR|ERVL 216146 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr5-6845 chr5 116271463 116271673 + 8.60 0.000 intron (NM_001308080, intron 5 of 6) intron (NM_001308080, intron 5 of 6) 15825 NR_162144 113219464 NR_162144 MIR12130 - microRNA 12130 ncRNA chr7-6887 chr7 68361640 68361850 + 8.60 0.000 Intergenic AluSx|SINE|Alu 341492 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr2-13590 chr2 157303896 157304106 + 8.60 0.000 intron (NM_001329868, intron 8 of 10) MER103C|DNA|hAT-Charlie 21823 NM_020711 57471 Hs.443894 NM_020711 ENSG00000136541 ERMN JN|KIAA1189 ermin protein-coding chr7-1448 chr7 68963589 68963799 + 8.60 0.000 Intergenic LTR26|LTR|ERV1 633930 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr1-6447 chr1 17102907 17103117 + 8.60 0.000 exon (NM_007365, exon 3 of 16) exon (NM_007365, exon 3 of 16) 16439 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr3-2600 chr3 156174382 156174592 + 8.60 0.000 intron (NM_003471, intron 1 of 13) intron (NM_003471, intron 1 of 13) 31525 NM_003471 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr2-7324 chr2 240906726 240906936 + 8.60 0.000 intron (NM_001351305, intron 1 of 31) intron (NM_001351305, intron 1 of 31) 495 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr5-6859 chr5 119650338 119650548 + 8.60 0.000 Intergenic Intergenic 20884 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr7-4655 chr7 32420840 32421050 + 8.60 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 7279 NM_001322059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr22-2170 chr22 44118352 44118562 + 8.60 0.000 intron (NM_001243386, intron 3 of 11) intron (NM_001243386, intron 3 of 11) 49340 NM_001243385 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr8-6595 chr8 72631675 72631885 + 8.60 0.000 intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) 94555 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr19-5802 chr19 36006426 36006636 + 8.60 0.000 exon (NM_001297735, exon 3 of 6) exon (NM_001297735, exon 3 of 6) 2282 NM_001039876 163183 Hs.436743 NM_153233 ENSG00000181392 SYNE4 C19orf46|DFNB76|KASH4|Nesp4 spectrin repeat containing nuclear envelope family member 4 protein-coding chr4-8295 chr4 143117673 143117883 + 8.60 0.000 Intergenic L2|LINE|L2 67083 NR_136203 105377623 NR_136203 ENSG00000250326 LOC105377623 - uncharacterized LOC105377623 ncRNA chr12-2652 chr12 6179419 6179629 + 8.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -20422 NM_001330312 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr2-6746 chr2 37211419 37211629 + 8.60 0.000 intron (NM_005760, intron 12 of 15) intron (NM_005760, intron 12 of 15) 15028 NM_001322375 100505876 Hs.666958 NM_001322373 ENSG00000218739 CEBPZOS CEBPZ-AS1 CEBPZ opposite strand protein-coding chr2-8905 chr2 180574035 180574245 + 8.60 0.000 Intergenic Intergenic -117964 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr2-11845 chr2 20159763 20159973 + 8.60 0.000 Intergenic L1MD1|LINE|L1 65262 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr13-4057 chr13 75639183 75639393 + 8.60 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 2958 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr15-1144 chr15 62617764 62617974 + 8.60 0.000 Intergenic Intergenic 27312 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr8-3206 chr8 123025129 123025339 + 8.60 0.000 intron (NM_001330601, intron 1 of 6) intron (NM_001330601, intron 1 of 6) 538 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr4-1594 chr4 24583599 24583809 + 8.60 0.000 intron (NM_001358, intron 1 of 13) intron (NM_001358, intron 1 of 13) 850 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr8-6431 chr8 59821766 59821976 + 8.60 0.000 Intergenic L1MC1|LINE|L1 459529 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr17-6944 chr17 42874057 42874267 + 8.60 0.000 TTS (NR_027254) TTS (NR_027254) 7017 NR_002773 90586 Hs.367781 NR_002773 ENSG00000260105 AOC4P AOC4|UPAT amine oxidase copper containing 4, pseudogene pseudo chr12-8127 chr12 120350043 120350253 + 8.60 0.000 intron (NM_002442, intron 11 of 14) AluJb|SINE|Alu 19016 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chr21-1217 chr21 45167742 45167952 + 8.60 0.000 intron (NM_001346687, intron 1 of 11) L1MD|LINE|L1 15317 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr1-9720 chr1 53254359 53254569 + 8.60 0.000 intron (NM_004631, intron 16 of 18) L2c|LINE|L2 15854 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 - uncharacterized LOC100507564 ncRNA chr1-10121 chr1 101002629 101002839 + 8.60 0.000 intron (NM_001077394, intron 4 of 7) MIR3|SINE|MIR 23050 NM_001077395 51611 Hs.440776 NM_015958 ENSG00000117543 DPH5 AD-018|CGI-30|HSPC143|NPD015 diphthamide biosynthesis 5 protein-coding chr12-6876 chr12 20342060 20342270 + 8.60 0.000 Intergenic L2c|LINE|L2 -27080 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr20-1123 chr20 32114721 32114931 + 8.60 0.000 intron (NM_001363731, intron 1 of 17) MIR3|SINE|MIR 5098 NM_001363731 9777 Hs.654665 NM_014742 ENSG00000101337 TM9SF4 dJ836N17.2 transmembrane 9 superfamily member 4 protein-coding chr5-1858 chr5 138096487 138096697 + 8.60 0.000 Intergenic Intergenic 12559 NM_001300939 7478 Hs.591274 NM_031933 ENSG00000061492 WNT8A WNT8D Wnt family member 8A protein-coding chr2-12748 chr2 84851015 84851225 + 8.60 0.000 intron (NM_001307978, intron 2 of 4) intron (NM_001307978, intron 2 of 4) 29964 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr2-11805 chr2 16880385 16880595 + 8.60 0.000 Intergenic Intergenic -214656 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr22-2036 chr22 41617106 41617316 + 8.60 0.000 intron (NM_015704, intron 1 of 5) MIR|SINE|MIR 3832 NM_015704 27351 Hs.570455 NM_015704 ENSG00000100418 DESI1 D15Wsu75e|DESI2|DJ347H13.4|DeSI-1|FAM152B|POST|PPPDE2 desumoylating isopeptidase 1 protein-coding chr18-2475 chr18 46603895 46604105 + 8.60 0.000 intron (NM_144612, intron 7 of 39) intron (NM_144612, intron 7 of 39) -44688 NM_001145472 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr5-7361 chr5 18988780 18988990 + 8.60 0.000 Intergenic Intergenic 897387 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr20-1757 chr20 49915650 49915860 + 8.60 0.000 promoter-TSS (NM_006038) promoter-TSS (NM_006038) -67 NR_134564 105372653 Hs.589895 NR_134564 LOC105372653 - uncharacterized LOC105372653 ncRNA chr20-3025 chr20 53483905 53484115 + 8.60 0.000 intron (NM_173485, intron 2 of 2) intron (NM_173485, intron 2 of 2) -68760 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr8-4944 chr8 110547059 110547269 + 8.60 0.000 Intergenic ERVL-E-int|LTR|ERVL 480269 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr11-9019 chr11 25672338 25672548 + 8.60 0.000 Intergenic Intergenic -516680 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr7-8061 chr7 23207004 23207214 + 8.60 0.000 Intergenic Intergenic 25061 NM_001370445 11097 Hs.408241 NM_007342 ENSG00000136243 NUP42 CG1|NLP-1|NLP_1|NUPL2|hCG1 nucleoporin 42 protein-coding chr4-4544 chr4 71209070 71209280 + 8.60 0.000 intron (NM_001098484, intron 1 of 25) intron (NM_001098484, intron 1 of 25) 21889 NM_001134742 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr3-6039 chr3 49842644 49842854 + 8.60 0.000 intron (NM_005879, intron 5 of 14) intron (NM_005879, intron 5 of 14) 13815 NM_005879 10293 Hs.517972 NM_005879 ENSG00000183763 TRAIP RNF206|SCKL9|TRIP TRAF interacting protein protein-coding chr19-1767 chr19 14363516 14363726 + 8.60 0.000 intron (NR_134908, intron 1 of 3) intron (NR_134908, intron 1 of 3) 369 NR_134908 105372288 Hs.628463 NR_134908 ENSG00000266913 LINC01841 - long intergenic non-protein coding RNA 1841 ncRNA chr8-3976 chr8 51858888 51859098 + 8.60 0.000 intron (NM_001286783, intron 1 of 5) intron (NM_001286783, intron 1 of 5) 40043 NM_052937 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr20-649 chr20 25468427 25468637 + 8.60 0.000 intron (NM_025176, intron 18 of 23) intron (NM_025176, intron 18 of 23) 60849 NR_134574 9837 Hs.658464 NM_021067 ENSG00000101003 GINS1 IMD55|PSF1 GINS complex subunit 1 protein-coding chr3-4478 chr3 51802376 51802586 + 8.60 0.000 Intergenic Intergenic -15122 NR_038214 100506840 Hs.254808 NR_038213 ENSG00000224792 IQCF4 - IQ motif containing F5 pseudogene pseudo chrX-5041 chrX 122284777 122284987 + 8.60 0.000 Intergenic MER21-int|LTR|ERVL -899361 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr3-3571 chr3 53046504 53046714 + 8.60 0.000 promoter-TSS (NM_016329) promoter-TSS (NM_016329) -536 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr20-2211 chr20 58801298 58801508 + 8.60 0.000 Intergenic AluSx|SINE|Alu 16291 NR_029844 407022 NR_029844 ENSG00000284040 MIR296 MIRN296|miRNA296|mir-296 microRNA 296 ncRNA chr15-4661 chr15 64688416 64688626 + 8.60 0.000 3' UTR (NM_002537, exon 5 of 5) 3' UTR (NM_002537, exon 5 of 5) 14760 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr4-6184 chr4 43553379 43553589 + 8.60 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -60941 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr4-8071 chr4 122549168 122549378 + 8.60 0.000 Intergenic MIR|SINE|MIR -69710 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr2-4508 chr2 23828889 23829099 + 8.60 0.000 intron (NR_125717, intron 14 of 28) intron (NR_125717, intron 14 of 28) 98129 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr19-2078 chr19 41180576 41180786 + 8.60 0.000 Intergenic SVA_D|Retroposon|SVA -12538 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr22-2826 chr22 43419664 43419874 + 8.60 0.000 intron (NM_001362786, intron 1 of 6) intron (NM_001362786, intron 1 of 6) 3217 NM_001362786 758 Hs.159538 NM_001044370 ENSG00000186732 MPPED1 239AB|C22orf1|FAM1A metallophosphoesterase domain containing 1 protein-coding chr6-3345 chr6 23446432 23446642 + 8.60 0.000 Intergenic Intergenic -679678 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr1-3482 chr1 61254863 61255073 + 8.60 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) -1450 NR_104180 645030 Hs.632410 NR_104180 ENSG00000237853 NFIA-AS1 - NFIA antisense RNA 1 ncRNA chr8-4890 chr8 73341175 73341385 + 8.60 0.000 non-coding (NR_125388, exon 3 of 6) non-coding (NR_125388, exon 3 of 6) 15181 NR_125388 101926926 Hs.640090 NR_125388 ENSG00000250295 RDH10-AS1 - RDH10 antisense RNA 1 ncRNA chr11-3713 chr11 11764114 11764324 + 8.60 0.000 Intergenic Intergenic 19003 NR_107037 102465870 NR_107037 ENSG00000278529 MIR8070 hsa-mir-8070 microRNA 8070 ncRNA chr15-3253 chr15 75583956 75584166 + 8.60 0.000 Intergenic Intergenic -4746 NM_002833 5780 Hs.445775 NM_002833 ENSG00000169410 PTPN9 MEG2|PTPMEG2 protein tyrosine phosphatase non-receptor type 9 protein-coding chr1-8297 chr1 43602858 43603068 + 8.60 0.000 intron (NM_001329137, intron 15 of 34) intron (NM_001329137, intron 15 of 34) -47186 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr11-3561 chr11 44918367 44918577 + 8.60 0.000 intron (NM_130783, intron 6 of 9) intron (NM_130783, intron 6 of 9) 31688 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chrX-3293 chrX 106499044 106499254 + 8.60 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -112781 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr4-3894 chr4 145230848 145231058 + 8.60 0.000 Intergenic Charlie24|DNA|hAT-Charlie -50364 NM_001366057 54726 Hs.270851 NM_017493 ENSG00000164164 OTUD4 DUBA6|HIN1|HSHIN1 OTU deubiquitinase 4 protein-coding chr8-2866 chr8 138399645 138399855 + 8.60 0.000 intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 97511 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr7-9099 chr7 106165516 106165726 + 8.60 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -53045 NM_006754 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr19-3014 chr19 47765949 47766159 + 8.60 0.000 intron (NR_132382, intron 2 of 2) intron (NR_132382, intron 2 of 2) 2786 NR_132382 106144593 Hs.421907 NR_132382 ENSG00000269656 NOP53-AS1 GLTSCR2-AS1 NOP53 antisense RNA 1 ncRNA chr10-4857 chr10 14733602 14733812 + 8.60 0.000 intron (NM_031453, intron 1 of 4) MIRb|SINE|MIR 41190 NM_001282695 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr20-3861 chr20 25760364 25760574 + 8.60 0.000 Intergenic Intergenic 9261 NR_135006 105372582 Hs.516951 NR_135006 LOC105372582 - uncharacterized LOC105372582 ncRNA chr5-7979 chr5 83623743 83623953 + 8.60 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -61534 NR_136215 105379054 Hs.643801 NR_136215 ENSG00000249835 VCAN-AS1 - VCAN antisense RNA 1 ncRNA chr7-3769 chr7 80425433 80425643 + 8.60 0.000 Intergenic Intergenic -51099 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chr2-11036 chr2 109707684 109707894 + 8.60 0.000 Intergenic Intergenic -84969 NM_032260 84220 Hs.469630 NM_005054 ENSG00000015568 RGPD5 BS-63|BS63|HEL161|RGP5 RANBP2 like and GRIP domain containing 5 protein-coding chr17-4790 chr17 47882403 47882613 + 8.60 0.000 Intergenic Intergenic 13308 NR_135480 102724532 Hs.729067 NR_135480 ENSG00000264920 LOC102724532 - uncharacterized LOC102724532 ncRNA chr6-8546 chr6 161476693 161476903 + 8.60 0.000 intron (NR_134595, intron 1 of 3) intron (NR_134595, intron 1 of 3) 5821 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr12-7519 chr12 69099002 69099212 + 8.60 0.000 Intergenic AluJr|SINE|Alu -135867 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr1-6297 chr1 1485121 1485331 + 8.60 0.000 intron (NM_031921, intron 8 of 15) CpG-107 7377 NM_001317238 83858 Hs.729021 NM_031921 ENSG00000160072 ATAD3B AAA-TOB3|TOB3 ATPase family AAA domain containing 3B protein-coding chr5-9116 chr5 174028102 174028312 + 8.60 0.000 Intergenic L1MEg|LINE|L1 -17499 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr5-3245 chr5 96757184 96757394 + 8.60 0.000 intron (NM_001042446, intron 17 of 26) intron (NM_001042446, intron 17 of 26) 13687 NR_104285 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr18-992 chr18 24422675 24422885 + 8.60 0.000 Intergenic LTR16B2|LTR|ERVL -3890 NM_018439 55364 Hs.515317 NM_018439 ENSG00000154059 IMPACT RWDD5 impact RWD domain protein protein-coding chr1-16416 chr1 225767904 225768114 + 8.60 0.000 Intergenic Intergenic -9804 NM_003133 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding chr9-4525 chr9 72887875 72888085 + 8.60 0.000 Intergenic LTR78|LTR|ERV1 -13871 NR_121181 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr19-6555 chr19 19242297 19242507 + 8.60 0.000 intron (NM_004386, intron 12 of 14) intron (NM_004386, intron 12 of 14) 20402 NM_023002 404037 Hs.367829 NM_023002 ENSG00000187664 HAPLN4 BRAL2 hyaluronan and proteoglycan link protein 4 protein-coding chr8-3908 chr8 40931082 40931292 + 8.60 0.000 Intergenic AluSc|SINE|Alu -33361 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr14-3296 chr14 84758739 84758949 + 8.60 0.000 Intergenic LTR16A1|LTR|ERVL -513088 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr2-8747 chr2 161208562 161208772 + 8.60 0.000 intron (NM_001199135, intron 4 of 7) MLT1F1|LTR|ERVL-MaLR -36072 NR_110164 100996579 Hs.660929 NR_110163 ENSG00000227403 LINC01806 - long intergenic non-protein coding RNA 1806 ncRNA chr2-10760 chr2 38056226 38056436 + 8.60 0.000 intron (NM_144713, intron 10 of 10) L2b|LINE|L2 19850 NM_000104 1545 Hs.154654 NM_000104 ENSG00000138061 CYP1B1 ASGD6|CP1B|CYPIB1|GLC3A|P4501B1 cytochrome P450 family 1 subfamily B member 1 protein-coding chr12-5311 chr12 112039871 112040081 + 8.60 0.000 intron (NM_024953, intron 21 of 23) intron (NM_024953, intron 21 of 23) -2261 NR_037430 100500889 NR_037430 ENSG00000266370 MIR3657 - microRNA 3657 ncRNA chr8-3345 chr8 40191461 40191671 + 8.60 0.000 Intergenic MIR|SINE|MIR 38084 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr7-8106 chr7 26038527 26038737 + 8.60 0.000 Intergenic Intergenic -88646 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr1-14352 chr1 41044358 41044568 + 8.60 0.000 TTS (NR_037868) TTS (NR_037868) -22708 NM_001168247 200172 Hs.194609 NM_144990 ENSG00000171790 SLFNL1 - schlafen like 1 protein-coding chr18-663 chr18 48974057 48974267 + 8.60 0.000 Intergenic Intergenic -23451 NM_001190821 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr2-10446 chr2 207398598 207398808 + 8.60 0.000 Intergenic Intergenic -129279 NR_031633 100302130 NR_031633 ENSG00000221628 MIR1302-4 MIRN1302-4|hsa-mir-1302-4 microRNA 1302-4 ncRNA chr9-7921 chr9 89458281 89458491 + 8.60 0.000 intron (NM_001371194, intron 1 of 15) intron (NM_001371194, intron 1 of 15) 21504 NR_163888 chr9-6177 chr9 84491646 84491856 + 8.60 0.000 Intergenic Intergenic -123024 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr1-11793 chr1 24835002 24835212 + 8.60 0.000 intron (NM_013943, intron 4 of 5) intron (NM_013943, intron 4 of 5) 84309 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr14-5325 chr14 102224926 102225136 + 8.60 0.000 intron (NR_148556, intron 7 of 7) intron (NR_148556, intron 7 of 7) 10395 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr22-1424 chr22 43821295 43821505 + 8.60 0.000 Intergenic Intergenic -9095 NM_198856 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr16-3528 chr16 30518662 30518872 + 8.60 0.000 intron (NM_002209, intron 29 of 30) intron (NM_002209, intron 29 of 30) 7799 NM_024671 79724 Hs.85658 NM_024671 ENSG00000169957 ZNF768 - zinc finger protein 768 protein-coding chr1-2583 chr1 41073991 41074201 + 8.60 0.000 intron (NM_001172218, intron 10 of 15) intron (NM_001172218, intron 10 of 15) -52341 NM_001168247 200172 Hs.194609 NM_144990 ENSG00000171790 SLFNL1 - schlafen like 1 protein-coding chr10-8957 chr10 118547888 118548098 + 8.60 0.000 Intergenic Intergenic 47655 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chr9-3535 chr9 35862271 35862481 + 8.60 0.000 3' UTR (NM_001042590, exon 13 of 13) 3' UTR (NM_001042590, exon 13 of 13) 8025 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chr5-7499 chr5 35324113 35324323 + 8.60 0.000 Intergenic L1PA13|LINE|L1 -93731 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr22-1327 chr22 17726304 17726514 + 8.60 0.000 intron (NM_001270733, intron 1 of 1) Tigger4b|DNA|TcMar-Tigger 19751 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr4-6686 chr4 2988534 2988744 + 8.60 0.000 intron (NM_001004057, intron 2 of 14) intron (NM_001004057, intron 2 of 14) 25068 NM_001004057 2868 Hs.32959 NM_005307 ENSG00000125388 GRK4 GPRK2L|GPRK4|GRK4a|IT11 G protein-coupled receptor kinase 4 protein-coding chr1-11030 chr1 222483955 222484165 + 8.60 0.000 Intergenic MER21C|LTR|ERVL 64044 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr19-2855 chr19 5710883 5711093 + 8.60 0.000 intron (NM_001276479, intron 5 of 18) AluSx|SINE|Alu 9158 NM_004793 9361 Hs.350265 NM_004793 ENSG00000196365 LONP1 CODASS|LON|LONP|LonHS|PIM1|PRSS15|hLON lon peptidase 1, mitochondrial protein-coding chr2-6041 chr2 119426358 119426568 + 8.60 0.000 Intergenic Intergenic -5391 NM_183240 140738 Hs.26216 NM_183240 ENSG00000171227 TMEM37 PR|PR1 transmembrane protein 37 protein-coding chr2-5942 chr2 31968243 31968453 + 8.60 0.000 intron (NR_126034, intron 1 of 6) intron (NR_126034, intron 1 of 6) 42316 NM_001137602 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding chr1-3824 chr1 22876530 22876740 + 8.60 0.000 intron (NM_004442, intron 5 of 15) intron (NM_004442, intron 5 of 15) -13409 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chrX-1664 chrX 151602199 151602409 + 8.60 0.000 intron (NM_173493, intron 2 of 15) L2b|LINE|L2 38629 NM_173493 139135 Hs.160594 NM_173493 ENSG00000166049 PASD1 CT63|CT64|OXTES1 PAS domain containing repressor 1 protein-coding chr1-9872 chr1 66264085 66264295 + 8.60 0.000 intron (NM_001037340, intron 4 of 14) intron (NM_001037340, intron 4 of 14) -67918 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr5-8710 chr5 142822070 142822280 + 8.60 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 46735 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr3-4922 chr3 195265466 195265676 + 8.60 0.000 intron (NM_152531, intron 1 of 3) intron (NM_152531, intron 1 of 3) 5588 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr1-3032 chr1 1479964 1480174 + 8.60 0.000 intron (NM_031921, intron 4 of 15) intron (NM_031921, intron 4 of 15) 2220 NM_001317238 83858 Hs.729021 NM_031921 ENSG00000160072 ATAD3B AAA-TOB3|TOB3 ATPase family AAA domain containing 3B protein-coding chr4-5862 chr4 121429782 121429992 + 8.60 0.000 Intergenic AluY|SINE|Alu -48869 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr10-5036 chr10 35153788 35153998 + 8.60 0.000 intron (NM_001352467, intron 2 of 3) intron (NM_001352467, intron 2 of 3) -13646 NM_001267565 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr3-2633 chr3 4575576 4575786 + 8.60 0.000 intron (NM_001168272, intron 4 of 60) intron (NM_001168272, intron 4 of 60) 82333 NM_002222 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr3-3875 chr3 39125475 39125685 + 8.60 0.000 intron (NR_159495, intron 11 of 27) intron (NR_159495, intron 11 of 27) -12626 NR_106880 102466743 NR_106880 ENSG00000284158 MIR6822 hsa-mir-6822 microRNA 6822 ncRNA chr13-2088 chr13 74286897 74287107 + 8.60 0.000 Intergenic Intergenic 55558 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr13-3395 chr13 91400841 91401051 + 8.60 0.000 intron (NM_004466, intron 1 of 7) intron (NM_004466, intron 1 of 7) 2325 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr1-11241 chr1 247965356 247965566 + 8.60 0.000 exon (NM_001004491, exon 1 of 1) exon (NM_001004491, exon 1 of 1) 129 NM_001004491 391191 Hs.690413 NM_001004491 ENSG00000187080 OR2AK2 OR1-47|OR2AK1P olfactory receptor family 2 subfamily AK member 2 protein-coding chr12-6153 chr12 5043249 5043459 + 8.60 0.000 promoter-TSS (NM_002234) promoter-TSS (NM_002234) -525 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr9-5231 chr9 76592197 76592407 + 8.60 0.000 Intergenic Intergenic 91669 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr10-8949 chr10 118020242 118020452 + 8.60 0.000 intron (NM_014904, intron 3 of 4) intron (NM_014904, intron 3 of 4) -26474 NR_026940 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA chr2-6937 chr2 112065920 112066130 + 8.60 0.000 intron (NM_001329914, intron 3 of 18) L1MC4|LINE|L1 10756 NM_032824 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr3-10738 chr3 155556901 155557111 + 8.60 0.000 intron (NM_001349252, intron 8 of 24) A-rich|Low_complexity|Low_complexity 71203 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr14-2317 chr14 89429511 89429721 + 8.60 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 12262 NR_036500 400236 Hs.585207 NR_036500 ENSG00000258920 FOXN3-AS1 - FOXN3 antisense RNA 1 ncRNA chr7-9120 chr7 107861405 107861615 + 8.60 0.000 Intergenic L4_C_Mam|LINE|RTE-X -29597 NM_001289752 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr14-3933 chr14 104200638 104200848 + 8.60 0.000 Intergenic Intergenic -22841 NR_146613 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr3-4044 chr3 74083290 74083500 + 8.60 0.000 Intergenic Intergenic 274151 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr2-12727 chr2 81305175 81305385 + 8.60 0.000 Intergenic Intergenic 161666 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr15-2872 chr15 41890107 41890317 + 8.60 0.000 intron (NM_016642, intron 3 of 67) intron (NM_016642, intron 3 of 67) -2565 NR_135681 105370792 Hs.627877 NR_135681 LOC105370792 - uncharacterized LOC105370792 ncRNA chr8-2275 chr8 98479661 98479871 + 8.60 0.000 intron (NM_006281, intron 10 of 10) L1MEf|LINE|L1 52808 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr2-9683 chr2 38748214 38748424 + 8.60 0.000 intron (NM_001031684, intron 4 of 7) AluJb|SINE|Alu 3042 NM_001031684 6432 Hs.309090 NM_006276 ENSG00000115875 SRSF7 9G8|AAG3|SFRS7 serine and arginine rich splicing factor 7 protein-coding chr5-4282 chr5 149003299 149003509 + 8.60 0.000 3' UTR (NM_024577, exon 17 of 17) 3' UTR (NM_024577, exon 17 of 17) 59005 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr11-9380 chr11 54565370 54565580 + 8.60 0.000 Intergenic L1PA4|LINE|L1 38523 NM_001004703 119749 Hs.553564 NM_001004703 ENSG00000185926 OR4C46 - olfactory receptor family 4 subfamily C member 46 protein-coding chr15-1981 chr15 41420475 41420685 + 8.60 0.000 intron (NM_015138, intron 1 of 17) intron (NM_015138, intron 1 of 17) 3476 NM_015138 23168 Hs.511096 NM_015138 ENSG00000137815 RTF1 GTL7|KIAA0252 RTF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr5-3491 chr5 172983637 172983847 + 8.60 0.000 promoter-TSS (NM_003945) promoter-TSS (NM_003945) -29 NM_003945 8992 Hs.484188 NM_003945 ENSG00000113732 ATP6V0E1 ATP6H|ATP6V0E|M9.2|Vma21|Vma21p ATPase H+ transporting V0 subunit e1 protein-coding chr17-7677 chr17 30721301 30721511 + 8.60 0.000 intron (NR_144394, intron 1 of 8) intron (NR_144394, intron 1 of 8) 11798 NR_144394 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr10-4942 chr10 26208786 26208996 + 8.60 0.000 intron (NM_017433, intron 34 of 34) L2a|LINE|L2 -7416 NM_000818 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chrX-3678 chrX 105013024 105013234 + 8.60 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 207564 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr17-7094 chr17 70722051 70722261 + 8.60 0.000 Intergenic Intergenic 480023 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr17-7227 chr17 1209674 1209884 + 8.60 0.000 intron (NM_001322841, intron 1 of 22) intron (NM_001322841, intron 1 of 22) 19943 NM_001322841 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr1-9693 chr1 51624923 51625133 + 8.60 0.000 intron (NM_148906, intron 1 of 22) intron (NM_148906, intron 1 of 22) 7936 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr5-4845 chr5 62762258 62762468 + 8.60 0.000 Intergenic Intergenic 183544 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr5-5230 chr5 116574764 116574974 + 8.60 0.000 promoter-TSS (NM_020796) promoter-TSS (NM_020796) -46 NM_020796 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding chr14-1610 chr14 101621629 101621839 + 8.60 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 60383 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr1-5430 chr1 31881329 31881539 + 8.60 0.000 Intergenic L1ME4b|LINE|L1 56384 NM_001369858 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase 4A2 protein-coding chr20-2022 chr20 62813913 62814123 + 8.60 0.000 TTS (NM_007346) TTS (NM_007346) -3032 NM_001853 1299 Hs.716639 NM_001853 ENSG00000092758 COL9A3 DJ885L7.4.1|EDM3|IDD|MED collagen type IX alpha 3 chain protein-coding chr12-3649 chr12 105962286 105962496 + 8.60 0.000 Intergenic Intergenic 177642 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr2-8769 chr2 164634331 164634541 + 8.60 0.000 Intergenic Intergenic -12954 NM_004490 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr14-2155 chr14 89332228 89332438 + 8.60 0.000 intron (NM_001085471, intron 3 of 6) L1MC1|LINE|L1 84900 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr11-8625 chr11 2440781 2440991 + 8.60 0.000 Intergenic Intergenic -4105 NM_000218 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr5-3610 chr5 123874794 123875004 + 8.60 0.000 Intergenic Intergenic 329482 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr11-3345 chr11 119600000 119600210 + 8.60 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 129095 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr11-4757 chr11 112087135 112087345 + 8.60 0.000 promoter-TSS (NR_028383) promoter-TSS (NR_028383) 367 NM_001276503 6392 Hs.356270 NM_003002 ENSG00000204370 SDHD CBT1|CII-4|CWS3|PGL|PGL1|QPs3|SDH4|cybS succinate dehydrogenase complex subunit D protein-coding chr22-2672 chr22 36538593 36538803 + 8.60 0.000 Intergenic Intergenic -9532 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr12-2466 chr12 57607373 57607583 + 8.60 0.000 exon (NM_178502, exon 5 of 7) exon (NM_178502, exon 5 of 7) -2638 NM_001111270 115557 Hs.61581 NM_133483 ENSG00000240771 ARHGEF25 GEFT|p63RhoGEF Rho guanine nucleotide exchange factor 25 protein-coding chr3-6897 chr3 156236564 156236774 + 8.60 0.000 intron (NM_003471, intron 1 of 13) intron (NM_003471, intron 1 of 13) -8786 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr14-1926 chr14 20799973 20800183 + 8.60 0.000 Intergenic AluSx3|SINE|Alu 2286 NM_198232 6035 Hs.78224 NM_002933 ENSG00000129538 RNASE1 RAC1|RIB1|RNS1 ribonuclease A family member 1, pancreatic protein-coding chr1-8922 chr1 7152090 7152300 + 8.60 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 237559 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr1-9219 chr1 22571663 22571873 + 8.60 0.000 intron (NM_020526, intron 2 of 16) intron (NM_020526, intron 2 of 16) 8279 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr1-12060 chr1 118791180 118791390 + 8.60 0.000 Intergenic L1PA10|LINE|L1 197058 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chrX-2522 chrX 96889873 96890083 + 8.60 0.000 intron (NM_007309, intron 5 of 26) L2a|LINE|L2 6070 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr4-6281 chr4 80779437 80779647 + 8.60 0.000 intron (NM_001206997, intron 4 of 6) intron (NM_001206997, intron 4 of 6) -251166 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chrX-2350 chrX 65218226 65218436 + 8.60 0.000 Intergenic L1PB1|LINE|L1 -183590 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chrX-2840 chrX 138756453 138756663 + 8.60 0.000 intron (NM_001139498, intron 2 of 5) intron (NM_001139498, intron 2 of 5) -17205 NM_033642 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr15-4262 chr15 34726534 34726744 + 8.60 0.000 Intergenic MER5B|DNA|hAT-Charlie 28359 NM_020660 57369 Hs.283816 NM_020660 ENSG00000159248 GJD2 CX36|GJA9 gap junction protein delta 2 protein-coding chr19-2214 chr19 39507404 39507614 + 8.60 0.000 exon (NM_203486, exon 7 of 9) exon (NM_203486, exon 7 of 9) -7604 NM_182704 348303 Hs.319284 NM_182704 ENSG00000186838 SELENOV SELV selenoprotein V protein-coding chr22-2658 chr22 36136539 36136749 + 8.60 0.000 Intergenic ERVL-int|LTR|ERVL 24111 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr12-6768 chr12 7676943 7677153 + 8.60 0.000 Intergenic AluJo|SINE|Alu -6449 NM_001304566 339 Hs.560 NM_001644 ENSG00000111701 APOBEC1 APOBEC-1|BEDP|CDAR1|HEPR apolipoprotein B mRNA editing enzyme catalytic subunit 1 protein-coding chr14-1306 chr14 38143218 38143428 + 8.60 0.000 Intergenic L2c|LINE|L2 -64581 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr12-2683 chr12 71440050 71440260 + 8.60 0.000 exon (NM_003667, exon 1 of 18) exon (NM_003667, exon 1 of 18) 357 NM_001277227 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding chr2-8344 chr2 108985195 108985405 + 8.60 0.000 intron (NM_022336, intron 1 of 11) intron (NM_022336, intron 1 of 11) 3920 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr8-6730 chr8 87210408 87210618 + 8.60 0.000 intron (NM_173538, intron 5 of 10) MSTA-int|LTR|ERVL-MaLR 344098 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr1-9262 chr1 24978976 24979186 + 8.60 0.000 Intergenic Intergenic -14071 NM_001031680 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr7-2024 chr7 66920922 66921132 + 8.60 0.000 promoter-TSS (NM_017994) promoter-TSS (NM_017994) -198 NM_017994 55069 Hs.488478 NM_017994 ENSG00000106609 TMEM248 C7orf42 transmembrane protein 248 protein-coding chr2-4520 chr2 33147680 33147890 + 8.60 0.000 intron (NM_206943, intron 5 of 33) intron (NM_206943, intron 5 of 33) 13188 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr2-4874 chr2 109679473 109679683 + 8.60 0.000 Intergenic Intergenic 65214 NM_023016 65124 Hs.355455 NM_023016 ENSG00000198142 SOWAHC ANKRD57|C2orf26 sosondowah ankyrin repeat domain family member C protein-coding chr19-5053 chr19 49724248 49724458 + 8.60 0.000 Intergenic MER41E|LTR|ERV1 33237 NR_108072 126129 Hs.112195 NM_152359 ENSG00000169169 CPT1C CATL1|CPT1-B|CPT1P|CPTI-B|CPTIC|SPG73 carnitine palmitoyltransferase 1C protein-coding chr9-8861 chr9 135930127 135930337 + 8.60 0.000 Intergenic Intergenic -22686 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr14-4012 chr14 42346541 42346751 + 8.60 0.000 Intergenic AluSx|SINE|Alu 739790 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-12791 chr1 82441477 82441687 + 8.60 0.000 Intergenic Intergenic -461601 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr1-11223 chr1 245875919 245876129 + 8.60 0.000 intron (NM_022743, intron 8 of 11) intron (NM_022743, intron 8 of 11) 541388 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-6938 chr1 155123999 155124209 + 8.60 0.000 Intergenic Intergenic -3772 NM_182685 1942 Hs.516664 NM_004428 ENSG00000169242 EFNA1 B61|ECKLG|EFL1|EPLG1|LERK-1|LERK1|TNFAIP4 ephrin A1 protein-coding chr1-6590 chr1 36691235 36691445 + 8.60 0.000 Intergenic L2|LINE|L2 -208026 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr3-6734 chr3 138517702 138517912 + 8.60 0.000 intron (NM_001320599, intron 11 of 17) L1PA4|LINE|L1 74149 NM_001320600 80321 Hs.531962 NM_024491 ENSG00000114107 CEP70 BITE centrosomal protein 70 protein-coding chr1-6491 chr1 22409445 22409655 + 8.60 0.000 Intergenic Intergenic -42301 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr2-9358 chr2 227605962 227606172 + 8.60 0.000 Intergenic Intergenic 12588 NR_149019 729968 Hs.689550 NR_149019 LOC729968 - spore coat protein SP96 ncRNA chr5-4263 chr5 139607462 139607672 + 8.60 0.000 intron (NM_181838, intron 3 of 7) intron (NM_181838, intron 3 of 7) -39732 NM_001317201 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chrX-5071 chrX 124541649 124541859 + 8.60 0.000 intron (NM_014253, intron 15 of 30) intron (NM_014253, intron 15 of 30) 195472 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr12-7461 chr12 63918784 63918994 + 8.60 0.000 intron (NM_001346201, intron 1 of 21) L2a|LINE|L2 74189 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr9-7543 chr9 34832420 34832630 + 8.60 0.000 non-coding (NR_024481, exon 4 of 4) non-coding (NR_024481, exon 4 of 4) 6061 NR_024481 389715 Hs.713965 NM_001126494 FAM205BP C9orf144|C9orf144A|FAM205B transmembrane protein C9orf144B pseudogene pseudo chr17-3841 chr17 43885639 43885849 + 8.60 0.000 intron (NM_001278372, intron 3 of 13) L1PB2|LINE|L1 14880 NM_001278376 4355 Hs.514208 NM_005374 ENSG00000108852 MPP2 DLG2 membrane palmitoylated protein 2 protein-coding chr15-3495 chr15 98063646 98063856 + 8.60 0.000 Intergenic Intergenic 25002 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chr20-3810 chr20 23504924 23505134 + 8.60 0.000 Intergenic Intergenic 13912 NM_001281730 10047 Hs.121602 NM_005492 ENSG00000125815 CST8 CRES|CTES5 cystatin 8 protein-coding chrX-2409 chrX 74351769 74351979 + 8.60 0.000 Intergenic Intergenic 47694 NM_203303 389874 Hs.157231 NM_203303 ENSG00000187969 ZCCHC13 CNBP2|ZNF9L zinc finger CCHC-type containing 13 protein-coding chr3-4825 chr3 139199522 139199732 + 8.60 0.000 Intergenic MER20|DNA|hAT-Charlie 33895 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 PISRT1 lncRNA ncRNA chr13-2968 chr13 60363385 60363595 + 8.60 0.000 Intergenic L2b|LINE|L2 -32967 NM_030794 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr2-12708 chr2 79503349 79503559 + 8.60 0.000 Intergenic ERVL-E-int|LTR|ERVL -2610 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA chrX-4612 chrX 74448948 74449158 + 8.60 0.000 intron (NM_006517, intron 1 of 5) intron (NM_006517, intron 1 of 5) 27560 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr22-1323 chr22 50277496 50277706 + 8.60 0.000 exon (NM_012401, exon 33 of 37) exon (NM_012401, exon 33 of 37) -7221 NM_002751 5600 Hs.57732 NM_002751 ENSG00000185386 MAPK11 P38B|P38BETA2|PRKM11|SAPK2|SAPK2B|p38-2|p38Beta mitogen-activated protein kinase 11 protein-coding KI270758.1-1 KI270758.1 71236 71446 + 8.60 0.000 NA NA NA NA chr10-5837 chr10 112896371 112896581 + 8.60 0.000 Intergenic MLT2B2|LTR|ERVL -53771 NM_001146283 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr9-7052 chr9 123938827 123939037 + 8.60 0.000 Intergenic L2b|LINE|L2 -8794 NM_001352964 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr20-3217 chr20 57896808 57897018 + 8.60 0.000 Intergenic Intergenic -106991 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr2-5571 chr2 170772975 170773185 + 8.60 0.000 intron (NR_110644, intron 1 of 4) LTR8|LTR|ERV1 -2314 NR_110185 101926913 Hs.301715 NR_110185 LOC101926913 - uncharacterized LOC101926913 ncRNA chr3-7821 chr3 103047278 103047488 + 8.60 0.000 Intergenic LTR40b|LTR|ERVL 476733 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr19-5322 chr19 3129795 3130005 + 8.60 0.000 Intergenic L1ME2|LINE|L1 -6133 NM_002068 2769 Hs.73797 NM_002068 ENSG00000060558 GNA15 GNA16 G protein subunit alpha 15 protein-coding chr22-2437 chr22 19735278 19735488 + 8.60 0.000 Intergenic Intergenic 11840 NM_000407 2812 Hs.283743 NM_000407 ENSG00000203618 GP1BB BDPLT1|BS|CD42C|GPIBB|GPIbbeta glycoprotein Ib platelet subunit beta protein-coding chr11-4487 chr11 111277853 111278063 + 8.60 0.000 intron (NM_198498, intron 2 of 4) intron (NM_198498, intron 2 of 4) -20588 NM_001271458 120376 Hs.31409 NM_001136105 ENSG00000214290 COLCA2 C11orf93|CASC13|LOH11CR1G colorectal cancer associated 2 protein-coding chr2-8724 chr2 158559161 158559371 + 8.60 0.000 intron (NM_001005476, intron 2 of 20) intron (NM_001005476, intron 2 of 20) 102314 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr18-949 chr18 11702429 11702639 + 8.60 0.000 intron (NM_182978, intron 1 of 11) intron (NM_182978, intron 1 of 11) 13270 NM_182978 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr2-7973 chr2 64400148 64400358 + 8.60 0.000 Intergenic Chap1_Mam|DNA|hAT-Charlie -53909 NM_014181 29094 Hs.372208 NM_014181 ENSG00000119862 LGALSL GRP|HSPC159 galectin like protein-coding chr9-7430 chr9 23667426 23667636 + 8.60 0.000 intron (NR_121602, intron 2 of 27) intron (NR_121602, intron 2 of 27) 4868 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr11-4865 chr11 34075633 34075843 + 8.60 0.000 intron (NM_005898, intron 4 of 18) intron (NM_005898, intron 4 of 18) 24007 NM_203364 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr4-1547 chr4 184474528 184474738 + 8.60 0.000 promoter-TSS (NM_002199) promoter-TSS (NM_002199) -83 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr10-6799 chr10 10102552 10102762 + 8.60 0.000 Intergenic LTR53-int|LTR|ERVL 43935 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA chr21-1896 chr21 44267763 44267973 + 8.60 0.000 Intergenic MER90|LTR|ERV1 -5652 NM_175867 29947 Hs.592165 NM_013369 ENSG00000142182 DNMT3L - DNA methyltransferase 3 like protein-coding chr2-6007 chr2 85395071 85395281 + 8.60 0.000 intron (NM_001320732, intron 9 of 9) intron (NM_001320732, intron 9 of 9) 14656 NM_001320732 822 Hs.516155 NM_001747 ENSG00000042493 CAPG AFCP|HEL-S-66|MCP capping actin protein, gelsolin like protein-coding chr14-1787 chr14 104216504 104216714 + 8.60 0.000 Intergenic Intergenic -6975 NR_146613 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr1-13255 chr1 221543638 221543848 + 8.60 0.000 Intergenic HAL1M8|LINE|L1 193157 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr2-13124 chr2 116291712 116291922 + 8.60 0.000 Intergenic L1MB1|LINE|L1 948002 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr1-11482 chr1 109910496 109910706 + 8.60 0.000 promoter-TSS (NM_172211) promoter-TSS (NM_172211) -248 NM_172210 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr16-2201 chr16 84116313 84116523 + 8.60 0.000 intron (NM_003791, intron 1 of 22) CpG 524 NM_003791 8720 Hs.75890 NM_003791 ENSG00000140943 MBTPS1 PCSK8|S1P|SEDKF|SKI-1 membrane bound transcription factor peptidase, site 1 protein-coding chr2-13199 chr2 121314268 121314478 + 8.60 0.000 Intergenic AluSx1|SINE|Alu -29171 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr19-3301 chr19 4359950 4360160 + 8.60 0.000 TTS (NM_001199944) TTS (NM_001199944) 16528 NM_001159846 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding chr11-7624 chr11 55276994 55277204 + 8.60 0.000 Intergenic SATR1|Satellite|Satellite 14944 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding chr7-6783 chr7 24597054 24597264 + 8.60 0.000 intron (NM_001303037, intron 1 of 11) L2|LINE|L2 23707 NM_016447 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr2-7731 chr2 36512643 36512853 + 8.60 0.000 intron (NM_016441, intron 10 of 16) intron (NM_016441, intron 10 of 16) 85420 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr10-7189 chr10 110143433 110143643 + 8.60 0.000 Intergenic Intergenic -64067 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr1-12708 chr1 53732929 53733139 + 8.60 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 1170 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr17-3317 chr17 64216489 64216699 + 8.60 0.000 intron (NM_018469, intron 1 of 11) intron (NM_018469, intron 1 of 11) 14140 NM_001288733 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr12-2809 chr12 112841821 112842031 + 8.60 0.000 intron (NR_145127, intron 4 of 22) (TC)n|Simple_repeat|Simple_repeat 50178 NR_145127 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr6-8435 chr6 152426236 152426446 + 8.60 0.000 intron (NM_182961, intron 38 of 145) intron (NM_182961, intron 38 of 145) 45811 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr5-5743 chr5 170533057 170533267 + 8.60 0.000 intron (NM_001278339, intron 1 of 7) intron (NM_001278339, intron 1 of 7) 29142 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr22-1900 chr22 45576411 45576621 + 8.60 0.000 intron (NM_006486, intron 15 of 16) intron (NM_006486, intron 15 of 16) 29131 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr18-2875 chr18 9781196 9781406 + 8.60 0.000 intron (NM_006868, intron 2 of 6) intron (NM_006868, intron 2 of 6) 73000 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr20-901 chr20 45324388 45324598 + 8.60 0.000 TTS (NM_002999) TTS (NM_002999) -15964 NM_003833 8785 Hs.278489 NM_003833 ENSG00000124159 MATN4 - matrilin 4 protein-coding chr2-11966 chr2 26875636 26875846 + 8.60 0.000 intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 27317 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr10-5409 chr10 76055558 76055768 + 8.60 0.000 intron (NM_001305581, intron 4 of 6) MER52A|LTR|ERV1 272902 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr8-7281 chr8 130710353 130710563 + 8.60 0.000 Intergenic LTR16E1|LTR|ERVL -266784 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr8-3764 chr8 23681809 23682019 + 8.60 0.000 intron (NM_001256339, intron 2 of 2) intron (NM_001256339, intron 2 of 2) 975 NM_001256339 4824 Hs.55999 NM_006167 ENSG00000167034 NKX3-1 BAPX2|NKX3|NKX3.1|NKX3A NK3 homeobox 1 protein-coding chr2-6098 chr2 196794638 196794848 + 8.60 0.000 intron (NM_012086, intron 2 of 17) AluSx|SINE|Alu 4940 NM_012086 9330 Hs.470996 NM_012086 ENSG00000119041 GTF3C3 TFIIIC102|TFIIICgamma|TFiiiC2-102 general transcription factor IIIC subunit 3 protein-coding chr1-14883 chr1 81471312 81471522 + 8.60 0.000 intron (NM_001366008, intron 2 of 26) intron (NM_001366008, intron 2 of 26) 86285 NR_125943 101927434 Hs.130394 NR_125943 ENSG00000234953 LOC101927434 - uncharacterized LOC101927434 ncRNA chr10-4190 chr10 101162136 101162346 + 8.60 0.000 Intergenic Intergenic -14081 NR_120620 101927396 Hs.551648 NR_120620 ENSG00000237579 LINC01514 - long intergenic non-protein coding RNA 1514 ncRNA chr2-8656 chr2 147721608 147721818 + 8.60 0.000 Intergenic Intergenic -122804 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr7-9688 chr7 153375335 153375545 + 8.60 0.000 Intergenic L2c|LINE|L2 36794 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr21-333 chr21 45416452 45416662 + 8.60 0.000 intron (NM_130445, intron 2 of 42) intron (NM_130445, intron 2 of 42) -6492 NR_052004 100874236 Hs.589901 NR_052004 ENSG00000224574 COL18A1-AS2 - COL18A1 antisense RNA 2 ncRNA chr17-2055 chr17 57954479 57954689 + 8.60 0.000 intron (NM_001271875, intron 1 of 10) CpG 828 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr20-3671 chr20 12198738 12198948 + 8.60 0.000 Intergenic Intergenic 280950 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr2-6691 chr2 21259591 21259801 + 8.60 0.000 Intergenic Intergenic 135710 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr9-3504 chr9 21974462 21974672 + 8.60 0.000 exon (NM_058197, exon 1 of 3) exon (NM_058197, exon 1 of 3) 260 NM_058197 1029 Hs.512599 NM_000077 ENSG00000147889 CDKN2A ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16 cyclin dependent kinase inhibitor 2A protein-coding chr19-6219 chr19 6060995 6061205 + 8.60 0.000 intron (NM_000635, intron 1 of 17) intron (NM_000635, intron 1 of 17) 49400 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr6-7866 chr6 106666952 106667162 + 8.60 0.000 3' UTR (NM_018292, exon 11 of 11) 3' UTR (NM_018292, exon 11 of 11) -28428 NR_149100 105377926 Hs.635821 NR_149100 ENSG00000229654 LINC02526 - long intergenic non-protein coding RNA 2526 ncRNA chrX-435 chrX 54494922 54495132 + 8.60 0.000 intron (NM_004463, intron 1 of 17) CpG 1207 NM_004463 2245 Hs.709201 NM_004463 ENSG00000102302 FGD1 AAS|FGDY|MRXS16|ZFYVE3 FYVE, RhoGEF and PH domain containing 1 protein-coding chr2-5964 chr2 48900265 48900475 + 8.60 0.000 Intergenic Intergenic -144646 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr20-2019 chr20 62416897 62417107 + 8.60 0.000 intron (NM_080833, intron 4 of 13) intron (NM_080833, intron 4 of 13) -9719 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding chr5-3400 chr5 143347970 143348180 + 8.60 0.000 intron (NR_157096, intron 1 of 7) intron (NR_157096, intron 1 of 7) 55208 NM_001364185 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chrX-1044 chrX 107000083 107000293 + 8.60 0.000 promoter-TSS (NM_024657) promoter-TSS (NM_024657) 24 NM_024657 79710 Hs.496544 NM_024657 ENSG00000133131 MORC4 ZCW4|ZCWCC2|dJ75H8.2 MORC family CW-type zinc finger 4 protein-coding chr22-3344 chr22 23219546 23219756 + 8.60 0.000 intron (NM_004327, intron 1 of 22) intron (NM_004327, intron 1 of 22) 39142 NM_021574 613 Hs.517461 NM_004327 ENSG00000186716 BCR ALL|BCR1|CML|D22S11|D22S662|PHL BCR activator of RhoGEF and GTPase protein-coding chr3-7207 chr3 191343308 191343518 + 8.60 0.000 intron (NM_178335, intron 1 of 11) intron (NM_178335, intron 1 of 11) -12877 NM_198152 257313 Hs.518492 NM_198152 ENSG00000188958 UTS2B U2B|URP|UTS2D urotensin 2B protein-coding chr7-3681 chr7 47763153 47763363 + 8.60 0.000 intron (NR_038407, intron 1 of 2) intron (NR_038407, intron 1 of 2) 1782 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr9-8534 chr9 126317422 126317632 + 8.60 0.000 Intergenic L1MC1|LINE|L1 -9302 NM_033446 89853 Hs.162659 NM_033446 ENSG00000196814 MVB12B C9orf28|FAM125B multivesicular body subunit 12B protein-coding chr6-4397 chr6 25945349 25945559 + 8.60 0.000 Intergenic LTR43B|LTR|ERV1 -14763 NM_005835 10246 Hs.591802 NM_005835 ENSG00000112337 SLC17A2 NPT3 solute carrier family 17 member 2 protein-coding chr1-8419 chr1 88150025 88150235 + 8.60 0.000 Intergenic Intergenic -534014 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr7-7311 chr7 44103518 44103728 + 8.60 0.000 promoter-TSS (NM_001129) promoter-TSS (NM_001129) -722 NM_001129 165 Hs.439463 NM_001129 ENSG00000106624 AEBP1 ACLP AE binding protein 1 protein-coding chr20-4279 chr20 49937345 49937555 + 8.60 0.000 intron (NM_018683, intron 1 of 5) intron (NM_018683, intron 1 of 5) 1053 NM_018683 55905 Hs.144949 NM_018683 ENSG00000124226 RNF114 PSORS12|ZNF313 ring finger protein 114 protein-coding chr9-4672 chr9 122810377 122810587 + 8.60 0.000 Intergenic Intergenic 10359 NM_080859 392392 Hs.632681 NM_080859 ENSG00000165204 OR1K1 hg99 olfactory receptor family 1 subfamily K member 1 protein-coding chr15-3730 chr15 56494931 56495141 + 8.60 0.000 Intergenic Intergenic -29899 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr8-4512 chr8 120971033 120971243 + 8.60 0.000 Intergenic Intergenic -159092 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr8-5946 chr8 19828350 19828560 + 8.60 0.000 intron (NR_148458, intron 9 of 18) intron (NR_148458, intron 9 of 18) 11039 NM_018142 55174 Hs.512627 NM_018142 ENSG00000104613 INTS10 C8orf35|INT10 integrator complex subunit 10 protein-coding chr5-2435 chr5 126281014 126281224 + 8.60 0.000 intron (NR_105039, intron 1 of 2) intron (NR_105039, intron 1 of 2) 4056 NR_105040 101927488 Hs.432319 NR_105039 LOC101927488 - uncharacterized LOC101927488 ncRNA chr6-7333 chr6 45965734 45965944 + 8.60 0.000 intron (NM_001370649, intron 1 of 5) intron (NM_001370649, intron 1 of 5) -28242 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr8-5515 chr8 62128432 62128642 + 8.60 0.000 Intergenic ERVL-B4-int|LTR|ERVL -120317 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr5-1965 chr5 111698050 111698260 + 8.60 0.000 intron (NR_040093, intron 2 of 6) intron (NR_040093, intron 2 of 6) 58096 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr6-5080 chr6 117384932 117385142 + 8.60 0.000 intron (NM_002944, intron 15 of 42) LTR33|LTR|ERVL 40818 NM_002944 6098 Hs.1041 NM_002944 ENSG00000047936 ROS1 MCF3|ROS|c-ros-1 ROS proto-oncogene 1, receptor tyrosine kinase protein-coding chr4-7206 chr4 41831800 41832010 + 8.60 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 50706 NR_104143 101927074 Hs.611425 NR_104143 ENSG00000245870 LINC00682 - long intergenic non-protein coding RNA 682 ncRNA chr7-5082 chr7 2373002 2373212 + 8.60 0.000 intron (NM_001037283, intron 12 of 18) intron (NM_001037283, intron 12 of 18) 18280 NM_003751 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr3-9588 chr3 55879813 55880023 + 8.60 0.000 intron (NR_132749, intron 13 of 17) L2a|LINE|L2 -27324 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr6-2936 chr6 26412301 26412511 + 8.60 0.000 intron (NM_007048, intron 9 of 9) LTR33|LTR|ERVL -8985 NR_027795 54718 Hs.729655 NM_024018 ENSG00000124549 BTN2A3P BTN2.3|BTN2A3 butyrophilin subfamily 2 member A3, pseudogene pseudo chr1-16250 chr1 211468144 211468354 + 8.60 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 24668 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr2-9180 chr2 214997251 214997461 + 8.60 0.000 intron (NR_103740, intron 25 of 54) intron (NR_103740, intron 25 of 54) 34730 NM_015657 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr17-5319 chr17 28248913 28249123 + 8.60 0.000 TTS (NR_002181) TTS (NR_002181) 1574 NR_002181 23614 Hs.744962 NR_002181 ENSG00000265060 PPY2P PPY2 pancreatic polypeptide 2, pseudogene pseudo chr6-1782 chr6 99425393 99425603 + 8.60 0.000 promoter-TSS (NM_032870) promoter-TSS (NM_032870) -153 NM_001322412 25957 Hs.520287 NM_015491 ENSG00000132424 PNISR C6orf111|HSPC306|SFRS18|SRrp130|bA98I9.2 PNN interacting serine and arginine rich protein protein-coding chr11-6249 chr11 55706165 55706375 + 8.60 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 41103 NM_001004704 219432 Hs.511921 NM_001004704 ENSG00000181903 OR4C6 OR11-138 olfactory receptor family 4 subfamily C member 6 protein-coding chr21-1465 chr21 34514789 34514999 + 8.60 0.000 Intergenic Intergenic -2684 NM_000219 3753 Hs.121495 NM_000219 ENSG00000180509 KCNE1 ISK|JLNS|JLNS2|LQT2/5|LQT5|MinK potassium voltage-gated channel subfamily E regulatory subunit 1 protein-coding chr9-6871 chr9 83293086 83293296 + 8.60 0.000 intron (NM_001244960, intron 12 of 13) (GGAG)n|Simple_repeat|Simple_repeat -25923 NM_001244962 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr14-3653 chr14 79823818 79824028 + 8.60 0.000 intron (NM_138970, intron 5 of 5) intron (NM_138970, intron 5 of 5) -387496 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chr16-4250 chr16 21097357 21097567 + 8.60 0.000 exon (NM_017539, exon 18 of 62) exon (NM_017539, exon 18 of 62) 53384 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr19-3728 chr19 43021751 43021961 + 8.60 0.000 intron (NM_203287, intron 1 of 4) intron (NM_203287, intron 1 of 4) 4613 NM_001113410 5680 Hs.741150 NM_002785 ENSG00000243130 PSG11 PSBG-11|PSBG-13|PSG13|PSG14 pregnancy specific beta-1-glycoprotein 11 protein-coding chr4-4185 chr4 10722284 10722494 + 8.60 0.000 Intergenic Intergenic -37621 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr8-1902 chr8 27634379 27634589 + 8.60 0.000 intron (NM_182826, intron 1 of 5) intron (NM_182826, intron 1 of 5) 424 NM_182826 51435 Hs.128856 NM_016240 ENSG00000168077 SCARA3 APC7|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A member 3 protein-coding chr4-4921 chr4 123786869 123787079 + 8.60 0.000 intron (NR_027106, intron 1 of 2) intron (NR_027106, intron 1 of 2) 12710 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr7-7622 chr7 134283395 134283605 + 8.60 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 33430 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr19-6953 chr19 47460071 47460281 + 8.60 0.000 intron (NM_015063, intron 2 of 9) intron (NM_015063, intron 2 of 9) 11717 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr3-8921 chr3 13132509 13132719 + 8.60 0.000 Intergenic L1ME1|LINE|L1 -59185 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr9-6934 chr9 96634888 96635098 + 8.60 0.000 Intergenic Intergenic -15150 NM_003671 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr18-1081 chr18 46152789 46152999 + 8.60 0.000 Intergenic Intergenic -21128 NM_001008239 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr15-1311 chr15 65399405 65399615 + 8.60 0.000 intron (NM_020962, intron 5 of 19) MER5A|DNA|hAT-Charlie -21508 NM_004884 9543 Hs.128292 NM_004884 ENSG00000174498 IGDCC3 HsT18880|PUNC immunoglobulin superfamily DCC subclass member 3 protein-coding chr1-9184 chr1 21317237 21317447 + 8.60 0.000 intron (NM_001113348, intron 1 of 18) MIRb|SINE|MIR 24052 NR_038404 100506801 Hs.663049 NR_038404 ENSG00000231105 LOC100506801 - uncharacterized LOC100506801 ncRNA chr5-9161 chr5 177259591 177259801 + 8.60 0.000 intron (NM_172349, intron 14 of 23) intron (NM_172349, intron 14 of 23) 44023 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr3-7202 chr3 190631298 190631508 + 8.60 0.000 intron (NM_001364881, intron 9 of 11) intron (NM_001364881, intron 9 of 11) 117318 NM_001167928 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr3-9310 chr3 43883083 43883293 + 8.60 0.000 Intergenic LTR16D|LTR|ERVL -191594 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr1-3227 chr1 183147859 183148069 + 8.60 0.000 Intergenic Intergenic -6694 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr8-3978 chr8 52323985 52324195 + 8.60 0.000 intron (NR_148195, intron 2 of 3) intron (NR_148195, intron 2 of 3) -69598 NM_001352845 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr3-11200 chr3 193826847 193827057 + 8.60 0.000 Intergenic Intergenic 17057 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr2-6801 chr2 53187684 53187894 + 8.60 0.000 Intergenic Intergenic -485174 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr1-4533 chr1 45928967 45929177 + 8.60 0.000 intron (NM_001324320, intron 4 of 29) L1MC5|LINE|L1 64724 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr19-3000 chr19 43701494 43701704 + 8.60 0.000 Intergenic L2a|LINE|L2 -14477 NM_019612 56269 Hs.515444 NM_019612 ENSG00000124449 IRGC CINEMA|IFGGE|IRGC1|Iigp5|R30953_1 immunity related GTPase cinema protein-coding chrX-2657 chrX 114382973 114383183 + 8.60 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -201000 NM_001256760 3358 Hs.149037 NM_000868 ENSG00000147246 HTR2C 5-HT1C|5-HT2C|5-HTR2C|5HTR2C|HTR1C 5-hydroxytryptamine receptor 2C protein-coding chr10-6711 chr10 124764060 124764270 + 8.60 0.000 intron (NM_001304467, intron 5 of 6) intron (NM_001304467, intron 5 of 6) -19787 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr3-10102 chr3 111669078 111669288 + 8.60 0.000 Intergenic Intergenic -5493 NM_001185106 257068 Hs.477114 NM_153268 ENSG00000240891 PLCXD2 - phosphatidylinositol specific phospholipase C X domain containing 2 protein-coding chr2-6822 chr2 61072143 61072353 + 8.60 0.000 intron (NM_001330432, intron 4 of 20) intron (NM_001330432, intron 4 of 20) 6039 NM_032506 84542 Hs.468653 NM_032506 ENSG00000162929 KIAA1841 - KIAA1841 protein-coding chr1-12499 chr1 21090699 21090909 + 8.60 0.000 intron (NM_001198802, intron 2 of 34) intron (NM_001198802, intron 2 of 34) 20579 NM_003760 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr5-5118 chr5 101722702 101722912 + 8.60 0.000 Intergenic Intergenic 573477 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr20-3873 chr20 29370182 29370392 + 8.60 0.000 Intergenic L1PA4|LINE|L1 46674 NR_037925 647476 Hs.274541 NR_037925 FRG2EP - FSHD region gene 2 family member E, pseudogene pseudo chr22-2870 chr22 45224501 45224711 + 8.60 0.000 intron (NM_001009880, intron 1 of 9) intron (NM_001009880, intron 1 of 9) -12140 NM_015264 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr11-7442 chr11 119197187 119197397 + 8.60 0.000 Intergenic Intergenic -1451 NM_001145018 283152 Hs.114777 NM_001033658 ENSG00000248712 CCDC153 - coiled-coil domain containing 153 protein-coding chr19-3708 chr19 36070760 36070970 + 8.60 0.000 intron (NM_001083961, intron 7 of 31) Kanga11a|DNA|TcMar-Tc2 15968 NM_173636 284403 Hs.116244 NM_173636 ENSG00000075702 WDR62 C19orf14|MCPH2 WD repeat domain 62 protein-coding chr17-1999 chr17 79611173 79611383 + 8.60 0.000 promoter-TSS (NM_001350453) promoter-TSS (NM_001350453) -227 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr10-8032 chr10 63410630 63410840 + 8.60 0.000 intron (NM_001322258, intron 1 of 24) intron (NM_001322258, intron 1 of 24) -19840 NR_134312 105378330 Hs.602852 NR_134312 LOC105378330 - uncharacterized LOC105378330 ncRNA chr16-4271 chr16 24576955 24577165 + 8.60 0.000 Intergenic Intergenic -33145 NM_001351850 27327 Hs.655057 NM_014494 ENSG00000090905 TNRC6A CAGH26|FAME6|GW1|GW182|TNRC6 trinucleotide repeat containing adaptor 6A protein-coding chr2-8004 chr2 68259022 68259232 + 8.48 0.000 Intergenic Intergenic -6595 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr4-6418 chr4 128553054 128553264 + 8.48 0.000 Intergenic Intergenic 125143 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr6-7840 chr6 104395618 104395828 + 8.48 0.000 Intergenic MLT2B3|LTR|ERVL 463823 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr5-3589 chr5 89677304 89677514 + 8.48 0.000 Intergenic L1MA1|LINE|L1 339311 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr19-6653 chr19 33417930 33418140 + 8.48 0.000 intron (NM_001166056, intron 7 of 12) intron (NM_001166056, intron 7 of 12) 43511 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr8-5873 chr8 14946132 14946342 + 8.48 0.000 intron (NM_139167, intron 1 of 7) intron (NM_139167, intron 1 of 7) -92727 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr17-8508 chr17 79056390 79056600 + 8.48 0.000 Intergenic MER31A|LTR|ERV1 -18442 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr5-8561 chr5 136194171 136194381 + 8.48 0.000 Intergenic Intergenic -1114 NM_001350994 389332 Hs.127680 NM_001350994 ENSG00000271824 SMIM32 - small integral membrane protein 32 protein-coding chrX-4849 chrX 103845119 103845329 + 8.48 0.000 Intergenic Intergenic -12942 NR_146560 51209 Hs.522736 NM_016370 ENSG00000123570 RAB9B RAB9L|Rab-9L RAB9B, member RAS oncogene family protein-coding chr9-4972 chr9 18297033 18297243 + 8.48 0.000 Intergenic Intergenic -177015 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr5-1701 chr5 108381238 108381448 + 8.48 0.000 exon (NM_001163315, exon 1 of 9) exon (NM_001163315, exon 1 of 9) 755 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr8-4569 chr8 127542243 127542453 + 8.48 0.000 Intergenic Intergenic -60209 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr9-3594 chr9 82148988 82149198 + 8.48 0.000 Intergenic Intergenic 160321 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr14-4162 chr14 77474029 77474239 + 8.48 0.000 TTS (NM_182509) TTS (NM_182509) 16041 NM_012111 10598 Hs.204041 NM_012111 ENSG00000100591 AHSA1 AHA1|C14orf3|hAha1|p38 activator of HSP90 ATPase activity 1 protein-coding chr12-4932 chr12 69042898 69043108 + 8.48 0.000 Intergenic LTR33|LTR|ERVL -79763 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr7-3271 chr7 16484921 16485131 + 8.48 0.000 Intergenic LTR16E2|LTR|ERVL -19288 NM_015464 25928 Hs.648106 NM_015464 ENSG00000171243 SOSTDC1 CDA019|DAND7|ECTODIN|USAG1 sclerostin domain containing 1 protein-coding chr14-911 chr14 72342620 72342830 + 8.48 0.000 intron (NM_001370288, intron 2 of 16) AluSx1|SINE|Alu -174095 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr9-7980 chr9 92681184 92681394 + 8.48 0.000 Intergenic L1ME3G|LINE|L1 -11158 NM_022755 64768 Hs.459896 NM_022755 ENSG00000127080 IPPK C9orf12|INSP5K2|IP5K|IPK1|bA476B13.1 inositol-pentakisphosphate 2-kinase protein-coding chr18-1706 chr18 2219182 2219392 + 8.48 0.000 Intergenic Intergenic 352218 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr17-5110 chr17 5234956 5235166 + 8.48 0.000 promoter-TSS (NM_207103) promoter-TSS (NM_207103) -201 NM_207103 388325 Hs.462080 NM_207103 ENSG00000161929 SCIMP C17orf87|UNQ5783 SLP adaptor and CSK interacting membrane protein protein-coding chr12-7412 chr12 57886637 57886847 + 8.48 0.000 intron (NR_148947, intron 1 of 3) intron (NR_148947, intron 1 of 3) 9740 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr2-12379 chr2 52962432 52962642 + 8.48 0.000 Intergenic L2c|LINE|L2 -259922 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr7-3812 chr7 94510362 94510572 + 8.48 0.000 intron (NM_001363428, intron 1 of 17) CpG 658 NM_001363426 64921 Hs.260041 NM_022900 ENSG00000127995 CASD1 C7orf12|NBLA04196|SOAT CAS1 domain containing 1 protein-coding chr1-9903 chr1 70444157 70444367 + 8.48 0.000 Intergenic LTR16A1|LTR|ERVL 32994 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr5-8867 chr5 153947847 153948057 + 8.48 0.000 Intergenic L1P1|LINE|L1 -48965 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chrX-3776 chrX 132498625 132498835 + 8.48 0.000 Intergenic Intergenic -8695 NM_001170704 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr2-8921 chr2 183035488 183035698 + 8.48 0.000 intron (NM_205842, intron 1 of 31) intron (NM_205842, intron 1 of 31) 2864 NM_013436 10787 Hs.603732 NM_013436 ENSG00000061676 NCKAP1 HEM2|NAP1|NAP125|p125Nap1 NCK associated protein 1 protein-coding chr8-2162 chr8 51461740 51461950 + 8.48 0.000 intron (NM_144651, intron 8 of 22) L1PA17|LINE|L1 347600 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chrX-2763 chrX 130101127 130101337 + 8.48 0.000 intron (NM_001127197, intron 1 of 8) CR1_Mam|LINE|CR1 9268 NM_001421 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr12-7247 chr12 51693901 51694111 + 8.48 0.000 intron (NM_001369788, intron 6 of 25) AluSq2|SINE|Alu 102770 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chrX-526 chrX 48498534 48498744 + 8.48 0.000 Intergenic Intergenic 10200 NR_135596 101927635 Hs.522635 NR_135596 ENSG00000224292 LOC101927635 - uncharacterized LOC101927635 ncRNA chr11-4399 chr11 78464361 78464571 + 8.48 0.000 intron (NM_024678, intron 11 of 13) LTR12C|LTR|ERV1 -34630 NR_120564 101928865 Hs.407574 NR_120564 ENSG00000251323 LINC02728 - long intergenic non-protein coding RNA 2728 ncRNA chr12-6198 chr12 21989963 21990173 + 8.48 0.000 Intergenic Intergenic -53374 NM_005691 10060 Hs.732701 NM_005691 ENSG00000069431 ABCC9 ABC37|ATFB12|CANTU|CMD1O|SUR2 ATP binding cassette subfamily C member 9 protein-coding chr1-9274 chr1 25494679 25494889 + 8.48 0.000 intron (NM_018202, intron 10 of 10) L2a|LINE|L2 -48801 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr2-7713 chr2 33555393 33555603 + 8.48 0.000 intron (NR_146505, intron 3 of 3) intron (NR_146505, intron 3 of 3) 13932 NR_146505 105374454 NR_146505 LOC105374454 - uncharacterized LOC105374454 ncRNA chr7-5995 chr7 103352682 103352892 + 8.48 0.000 TTS (NM_206884) TTS (NM_206884) 5144 NM_002803 5701 Hs.437366 NM_002803 ENSG00000161057 PSMC2 MSS1|Nbla10058|S7 proteasome 26S subunit, ATPase 2 protein-coding chr10-3422 chr10 35398006 35398216 + 8.48 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 61237 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr22-2561 chr22 27218192 27218402 + 8.48 0.000 Intergenic MIR3|SINE|MIR 6382 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr12-3565 chr12 16312135 16312345 + 8.48 0.000 Intergenic Intergenic -34555 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding chr2-8116 chr2 79299955 79300165 + 8.48 0.000 Intergenic L1MC2|LINE|L1 -140307 NM_138937 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding chr5-4453 chr5 5419548 5419758 + 8.48 0.000 Intergenic Intergenic -3024 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr5-6695 chr5 64076433 64076643 + 8.48 0.000 Intergenic Intergenic -89305 NM_178532 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr9-5913 chr9 132958786 132958996 + 8.48 0.000 intron (NM_004188, intron 1 of 10) intron (NM_004188, intron 1 of 10) 13184 NR_049862 100846992 NR_049862 ENSG00000263816 MIR548AW - microRNA 548aw ncRNA chr12-7425 chr12 59651540 59651750 + 8.48 0.000 intron (NM_001270623, intron 1 of 5) intron (NM_001270623, intron 1 of 5) -37725 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr6-7422 chr6 53204700 53204910 + 8.48 0.000 Intergenic AluYk2|SINE|Alu -55964 NM_003643 8521 Hs.23589 NM_003643 ENSG00000137270 GCM1 GCMA|hGCMa glial cells missing transcription factor 1 protein-coding chr8-5665 chr8 114992816 114993026 + 8.48 0.000 Intergenic Intergenic 675092 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr20-1528 chr20 45465239 45465449 + 8.48 0.000 Intergenic Intergenic -4409 NM_006103 10406 Hs.2719 NM_006103 ENSG00000101443 WFDC2 EDDM4|HE4|WAP5|dJ461P17.6 WAP four-disulfide core domain 2 protein-coding chr8-4446 chr8 113435143 113435353 + 8.48 0.000 intron (NM_001363185, intron 1 of 66) intron (NM_001363185, intron 1 of 66) 1691 NM_001363185 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr10-8054 chr10 65023933 65024143 + 8.48 0.000 Intergenic L1MC|LINE|L1 -99520 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA chrX-2710 chrX 121191139 121191349 + 8.48 0.000 Intergenic MER5B|DNA|hAT-Charlie 143634 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chr1-10428 chr1 158448042 158448252 + 8.48 0.000 Intergenic Intergenic -17415 NM_001004473 391109 Hs.690410 NM_001004473 ENSG00000173285 OR10K1 OR1-6 olfactory receptor family 10 subfamily K member 1 protein-coding chr2-12527 chr2 65775978 65776188 + 8.48 0.000 Intergenic Intergenic -343484 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr5-4931 chr5 74493617 74493827 + 8.48 0.000 intron (NR_126354, intron 1 of 2) MLT1K|LTR|ERVL-MaLR 43254 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA chr8-1963 chr8 61700199 61700409 + 8.48 0.000 intron (NM_001164755, intron 1 of 12) intron (NM_001164755, intron 1 of 12) -10493 NM_032468 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr3-7604 chr3 14826051 14826261 + 8.48 0.000 intron (NM_152536, intron 1 of 19) L1ME2z|LINE|L1 7194 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr21-1110 chr21 35159935 35160145 + 8.48 0.000 Intergenic L2c|LINE|L2 -110742 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr19-2591 chr19 1666947 1667157 + 8.48 0.000 Intergenic AluY|SINE|Alu -14437 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr1-13022 chr1 163787488 163787698 + 8.48 0.000 Intergenic L2c|LINE|L2 -364402 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr8-2821 chr8 127366044 127366254 + 8.48 0.000 intron (NR_117099, intron 3 of 3) intron (NR_117099, intron 3 of 3) -34250 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA chr15-2762 chr15 27461629 27461839 + 8.48 0.000 intron (NM_001270873, intron 5 of 5) LTR12_|LTR|ERV1 -300415 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr12-6210 chr12 24410090 24410300 + 8.48 0.000 intron (NM_152989, intron 1 of 17) AluJb|SINE|Alu 152296 NM_001261414 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr10-5893 chr10 118144976 118145186 + 8.48 0.000 intron (NR_026940, intron 3 of 3) intron (NR_026940, intron 3 of 3) -98140 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr4-3158 chr4 184961119 184961329 + 8.48 0.000 Intergenic Intergenic -22784 NR_039660 100616111 NR_039660 ENSG00000263458 MIR4455 - microRNA 4455 ncRNA chr10-4963 chr10 29080278 29080488 + 8.48 0.000 Intergenic Intergenic -208687 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr10-4987 chr10 31100991 31101201 + 8.48 0.000 Intergenic MIRc|SINE|MIR -69159 NM_001143768 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr13-4067 chr13 76087593 76087803 + 8.48 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -152566 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr4-6296 chr4 83722756 83722966 + 8.48 0.000 Intergenic Intergenic 186753 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr2-13036 chr2 108897872 108898082 + 8.48 0.000 intron (NM_022336, intron 11 of 11) L1MD1|LINE|L1 91243 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr3-9791 chr3 72129511 72129721 + 8.48 0.000 Intergenic Intergenic -21641 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr13-3224 chr13 26983073 26983283 + 8.48 0.000 Intergenic Intergenic -142355 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr6-4261 chr6 9647354 9647564 + 8.48 0.000 Intergenic Intergenic -757043 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr2-4941 chr2 173522067 173522277 + 8.48 0.000 Intergenic L2c|LINE|L2 167300 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr12-4316 chr12 132030476 132030686 + 8.48 0.000 promoter-TSS (NR_002979) promoter-TSS (NR_002979) -643 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr6-6072 chr6 141384447 141384657 + 8.48 0.000 Intergenic Intergenic 700738 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr1-10230 chr1 115705641 115705851 + 8.48 0.000 intron (NM_001232, intron 8 of 10) intron (NM_001232, intron 8 of 10) 63059 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr2-7174 chr2 204732292 204732502 + 8.48 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 186922 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr12-7008 chr12 31768467 31768677 + 8.48 0.000 Intergenic MER1A|DNA|hAT-Charlie 23726 NM_001013699 440093 Hs.448697 NM_001013699 ENSG00000188375 H3F3C H3.5 H3 histone family member 3C protein-coding chr14-3842 chr14 75306931 75307141 + 8.48 0.000 Intergenic ORSL|DNA|hAT-Tip100 12632 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr2-7684 chr2 30296653 30296863 + 8.48 0.000 Intergenic MIRb|SINE|MIR -49888 NR_122048 285043 Hs.429119 NR_122048 LINC01936 - long intergenic non-protein coding RNA 1936 ncRNA chr7-6166 chr7 128067910 128068120 + 8.48 0.000 intron (NM_014390, intron 16 of 23) intron (NM_014390, intron 16 of 23) -13846 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr20-2914 chr20 63916630 63916840 + 8.48 0.000 intron (NM_025219, intron 1 of 4) MER11A|LTR|ERVK -2714 NR_030637 100126329 NR_030637 ENSG00000283206 MIR941-1 MIRN941-1|mir-941-1 microRNA 941-1 ncRNA chr1-15370 chr1 150333081 150333291 + 8.48 0.000 non-coding (NR_146766, exon 6 of 16) non-coding (NR_146766, exon 6 of 16) 11653 NM_004698 9129 Hs.11776 NM_004698 ENSG00000117360 PRPF3 HPRP3|HPRP3P|PRP3|Prp3p|RP18|SNRNP90 pre-mRNA processing factor 3 protein-coding chr13-2015 chr13 38607004 38607214 + 8.48 0.000 intron (NR_126377, intron 2 of 2) intron (NR_126377, intron 2 of 2) 39385 NR_046999 100874147 Hs.555371 NR_046999 LINC00366 - long intergenic non-protein coding RNA 366 ncRNA chr11-8767 chr11 9372541 9372751 + 8.48 0.000 Intergenic Intergenic -12006 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chr16-5322 chr16 75789338 75789548 + 8.48 0.000 Intergenic Intergenic -62953 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr17-2041 chr17 43940621 43940831 + 8.48 0.000 TTS (NM_002722) TTS (NM_002722) 1548 NM_001319209 5539 Hs.558368 NM_002722 ENSG00000108849 PPY PNP|PP pancreatic polypeptide protein-coding chr15-2170 chr15 79472776 79472986 + 8.48 0.000 TTS (NM_015206) TTS (NM_015206) 40365 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr11-10673 chr11 128095540 128095750 + 8.48 0.000 Intergenic ERVL-B4-int|LTR|ERVL -113121 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr5-6212 chr5 72325985 72326195 + 8.48 0.000 intron (NM_001284403, intron 2 of 6) intron (NM_001284403, intron 2 of 6) 5717 NM_001284403 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr11-6656 chr11 75700048 75700258 + 8.48 0.000 Intergenic Intergenic -17685 NM_025098 80168 Hs.288568 NM_025098 ENSG00000166391 MOGAT2 DGAT2L5|DGAT2L5.|MGAT2|hDC5 monoacylglycerol O-acyltransferase 2 protein-coding chr8-7005 chr8 109134065 109134275 + 8.48 0.000 Intergenic Intergenic 47542 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr7-2637 chr7 1956024 1956234 + 8.48 0.000 intron (NM_001013837, intron 16 of 18) LTR71B|LTR|ERV1 -15558 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr4-4649 chr4 82274366 82274576 + 8.48 0.000 Intergenic L1PA7|LINE|L1 99520 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr14-3777 chr14 55483408 55483618 + 8.48 0.000 Intergenic Charlie25|DNA|hAT-Charlie -42968 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr1-15229 chr1 111882029 111882239 + 8.48 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) -25229 NR_046783 100874295 Hs.738190 NR_046783 ENSG00000232558 KCND3-IT1 - KCND3 intronic transcript 1 ncRNA chr20-1798 chr20 62309613 62309823 + 8.48 0.000 TTS (NM_175573) TTS (NM_175573) 6721 NM_007002 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr15-2374 chr15 44462522 44462732 + 8.48 0.000 intron (NM_016396, intron 2 of 12) MER1B|DNA|hAT-Charlie 34998 NM_016396 51496 Hs.497967 NM_016396 ENSG00000137770 CTDSPL2 HSPC058|HSPC129 CTD small phosphatase like 2 protein-coding chr15-4268 chr15 35359286 35359496 + 8.48 0.000 Intergenic L1PBa1|LINE|L1 12973 NR_037507 100500904 NR_037507 ENSG00000265102 MIR3942 - microRNA 3942 ncRNA chr9-5027 chr9 27486739 27486949 + 8.48 0.000 intron (NM_024761, intron 1 of 3) intron (NM_024761, intron 1 of 3) -37470 NM_020124 56832 Hs.591083 NM_020124 ENSG00000147896 IFNK IFNT1|INFE1 interferon kappa protein-coding chr19-5098 chr19 55400549 55400759 + 8.48 0.000 3' UTR (NM_014501, exon 4 of 4) 3' UTR (NM_014501, exon 4 of 4) 2003 NR_145781 109623451 NR_145781 SNORD157 - small nucleolar RNA, C/D box 157 snoRNA chr1-11895 chr1 49267919 49268129 + 8.48 0.000 intron (NR_125988, intron 2 of 3) intron (NR_125988, intron 2 of 3) 10613 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr5-2142 chr5 86642048 86642258 + 8.48 0.000 Intergenic L2b|LINE|L2 21647 NR_145802 109623460 NR_037402 SNORD138 MIR3607|mir-3607 small nucleolar RNA, C/D box 138 snoRNA chr3-6944 chr3 160400315 160400525 + 8.48 0.000 promoter-TSS (NM_005496) promoter-TSS (NM_005496) -139 NM_005496 10051 Hs.58992 NM_005496 ENSG00000113810 SMC4 CAP-C|CAPC|SMC-4|SMC4L1 structural maintenance of chromosomes 4 protein-coding chr9-5241 chr9 77901047 77901257 + 8.48 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 130659 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr1-8530 chr1 156879301 156879511 + 8.48 0.000 intron (NM_002529, intron 15 of 16) intron (NM_002529, intron 15 of 16) -14312 NM_001353682 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr5-3516 chr5 180362756 180362966 + 8.48 0.000 Intergenic Intergenic -9525 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr3-6325 chr3 79040768 79040978 + 8.48 0.000 intron (NM_002941, intron 3 of 30) intron (NM_002941, intron 3 of 30) -21414 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr12-4642 chr12 44529141 44529351 + 8.48 0.000 intron (NM_006159, intron 17 of 20) L2a|LINE|L2 346415 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr5-1966 chr5 113513676 113513886 + 8.48 0.000 promoter-TSS (NM_001345976) promoter-TSS (NM_001345976) 87 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr10-5556 chr10 88254754 88254964 + 8.48 0.000 Intergenic Intergenic 328459 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr1-7517 chr1 155183368 155183578 + 8.48 0.000 intron (NM_001256599, intron 9 of 9) intron (NM_001256599, intron 9 of 9) 8719 NM_001256601 80128 Hs.287735 NM_025058 ENSG00000163462 TRIM46 GENEY|TRIFIC tripartite motif containing 46 protein-coding chr9-3867 chr9 132960447 132960657 + 8.48 0.000 intron (NM_004188, intron 1 of 10) AluJr|SINE|Alu 14845 NR_049862 100846992 NR_049862 ENSG00000263816 MIR548AW - microRNA 548aw ncRNA chr17-5323 chr17 28397893 28398103 + 8.48 0.000 3' UTR (NM_080669, exon 5 of 5) 3' UTR (NM_080669, exon 5 of 5) 8214 NM_001242366 113235 Hs.446689 NM_080669 ENSG00000076351 SLC46A1 G21|HCP1|PCFT solute carrier family 46 member 1 protein-coding chr2-7505 chr2 20027695 20027905 + 8.48 0.000 Intergenic Intergenic -15132 NM_002381 4148 Hs.656199 NM_002381 ENSG00000132031 MATN3 DIPOA|EDM5|HOA|OADIP|OS2 matrilin 3 protein-coding chr8-2170 chr8 93592026 93592236 + 8.48 0.000 intron (NR_033858, intron 5 of 10) AluJr4|SINE|Alu 108302 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr8-3199 chr8 119053024 119053234 + 8.48 0.000 intron (NM_001324095, intron 3 of 7) LTR85c|LTR|Gypsy? -14118 NM_006438 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding chr19-4504 chr19 6362364 6362574 + 8.48 0.000 exon (NM_006012, exon 3 of 6) exon (NM_006012, exon 3 of 6) 938 NM_006012 8192 Hs.515092 NM_006012 ENSG00000125656 CLPP DFNB81|PRLTS3 caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding chr22-3550 chr22 17086937 17087147 + 8.48 0.000 intron (NM_014339, intron 1 of 12) (TC)n|Simple_repeat|Simple_repeat 2083 NM_001289905 23765 Hs.48353 NM_014339 ENSG00000177663 IL17RA CANDF5|CD217|CDw217|IL-17RA|IL17R|IMD51|hIL-17R interleukin 17 receptor A protein-coding chr3-4439 chr3 28802788 28802998 + 8.48 0.000 Intergenic Intergenic 227615 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr19-1748 chr19 2732574 2732784 + 8.48 0.000 3' UTR (NM_144564, exon 3 of 3) 3' UTR (NM_144564, exon 3 of 3) 7338 NM_144564 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr2-13662 chr2 162240948 162241158 + 8.48 0.000 intron (NM_004460, intron 2 of 25) intron (NM_004460, intron 2 of 25) 2392 NM_001291807 2191 Hs.654370 NM_004460 ENSG00000078098 FAP DPPIV|FAPA|FAPalpha|SIMP fibroblast activation protein alpha protein-coding chrX-2815 chrX 135081952 135082162 + 8.48 0.000 Intergenic HAL1|LINE|L1 16655 NM_001348255 644596 Hs.656427 NM_001348255 ENSG00000196972 SMIM10L2B LINC00086|LINC00087|NCRNA00086|NCRNA00087|SMIM10L2A small integral membrane protein 10 like 2B protein-coding chr4-7250 chr4 46836179 46836389 + 8.48 0.000 intron (NM_130902, intron 2 of 2) Tigger3b|DNA|TcMar-Tigger 72961 NM_130902 170712 Hs.479656 NM_130902 ENSG00000170516 COX7B2 - cytochrome c oxidase subunit 7B2 protein-coding chr9-5476 chr9 99651090 99651300 + 8.48 0.000 intron (NR_109802, intron 3 of 6) L1PREC2|LINE|L1 168694 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr5-5310 chr5 126845949 126846159 + 8.48 0.000 Intergenic Intergenic 68918 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr5-6339 chr5 134842497 134842707 + 8.48 0.000 Intergenic Intergenic -3078 NM_152409 134553 Hs.708536 NM_152409 ENSG00000181904 C5orf24 - chromosome 5 open reading frame 24 protein-coding chr7-2017 chr7 45173586 45173796 + 8.48 0.000 intron (NM_005856, intron 1 of 2) intron (NM_005856, intron 1 of 2) 15900 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr17-3259 chr17 31495226 31495436 + 8.48 0.000 intron (NM_001346748, intron 1 of 12) intron (NM_001346748, intron 1 of 12) 7223 NM_001303542 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr2-8516 chr2 129470933 129471143 + 8.48 0.000 Intergenic AluJb|SINE|Alu -197147 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr9-5708 chr9 124521001 124521211 + 8.48 0.000 3' UTR (NM_033334, exon 10 of 10) 3' UTR (NM_033334, exon 10 of 10) -13707 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr10-6029 chr10 126407919 126408129 + 8.48 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 13855 NR_073453 101101772 Hs.562258 NR_073453 ENSG00000235180 LINC00601 - long intergenic non-protein coding RNA 601 ncRNA chr8-6905 chr8 101852046 101852256 + 8.48 0.000 intron (NM_001040628, intron 4 of 7) MLT1A1|LTR|ERVL-MaLR -61182 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr6-2591 chr6 87251151 87251361 + 8.48 0.000 intron (NM_015021, intron 7 of 7) L2c|LINE|L2 -71332 NM_001287445 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr7-2883 chr7 127851208 127851418 + 8.48 0.000 intron (NM_014390, intron 12 of 23) intron (NM_014390, intron 12 of 23) -146196 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr1-3962 chr1 149812160 149812370 + 8.48 0.000 TTS (NM_001123375) TTS (NM_001123375) 108 NM_001024599 440689 Hs.632451 NM_001024599 ENSG00000203814 HIST2H2BF - histone cluster 2 H2B family member f protein-coding chr16-2180 chr16 69477153 69477363 + 8.48 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 52663 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr10-7845 chr10 45621951 45622161 + 8.48 0.000 intron (NM_174890, intron 8 of 9) intron (NM_174890, intron 8 of 9) -27150 NM_145021 220972 Hs.499489 NM_145021 ENSG00000165406 MARCH8 CMIR|MARCH-VIII|MIR|RNF178|c-MIR membrane associated ring-CH-type finger 8 protein-coding chr2-12914 chr2 100434500 100434710 + 8.48 0.000 Intergenic Intergenic -16937 NM_004854 9486 Hs.516370 NM_004854 ENSG00000115526 CHST10 HNK-1ST|HNK1ST carbohydrate sulfotransferase 10 protein-coding chr4-8261 chr4 140288485 140288695 + 8.48 0.000 intron (NR_033939, intron 4 of 4) (CACATA)n|Simple_repeat|Simple_repeat 31282 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr6-3215 chr6 136990113 136990323 + 8.48 0.000 non-coding (NR_027994, exon 2 of 3) non-coding (NR_027994, exon 2 of 3) 3013 NR_027994 100294720 Hs.520412 NR_027994 ENSG00000225391 NHEG1 - neuroblastoma highly expressed 1 ncRNA chr10-8889 chr10 113988163 113988373 + 8.48 0.000 Intergenic L2c|LINE|L2 -55598 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr22-2309 chr22 37998378 37998588 + 8.48 0.000 intron (NM_001301130, intron 5 of 5) intron (NM_001301130, intron 5 of 5) 9689 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr4-7760 chr4 94335142 94335352 + 8.48 0.000 intron (NM_014485, intron 1 of 5) intron (NM_014485, intron 1 of 5) 7589 NM_014485 27306 Hs.128433 NM_014485 ENSG00000163106 HPGDS GSTS|GSTS1|GSTS1-1|PGD2|PGDS hematopoietic prostaglandin D synthase protein-coding chr7-4032 chr7 156001461 156001671 + 8.48 0.000 Intergenic Intergenic 38934 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr10-2519 chr10 47025698 47025908 + 8.48 0.000 Intergenic Intergenic 114081 NM_001352533 26095 Hs.440733 NM_015605 ENSG00000204179 PTPN20 CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 protein tyrosine phosphatase non-receptor type 20 protein-coding chr2-12190 chr2 41647897 41648107 + 8.48 0.000 Intergenic Intergenic -229553 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr1-10287 chr1 150007675 150007885 + 8.48 0.000 intron (NM_020205, intron 1 of 11) intron (NM_020205, intron 1 of 11) 2946 NM_020205 56957 Hs.98322 NM_020205 ENSG00000264522 OTUD7B CEZANNE|ZA20D1 OTU deubiquitinase 7B protein-coding chr19-3870 chr19 19661939 19662149 + 8.48 0.000 intron (NM_020410, intron 1 of 25) intron (NM_020410, intron 1 of 25) 1632 NM_020410 57130 Hs.501794 NM_020410 ENSG00000105726 ATP13A1 ATP13A|CGI-152 ATPase 13A1 protein-coding chrX-3512 chrX 44675381 44675591 + 8.48 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -132627 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr18-2778 chr18 1669317 1669527 + 8.48 0.000 Intergenic L2c|LINE|L2 -309793 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr15-2348 chr15 35624891 35625101 + 8.48 0.000 intron (NR_038251, intron 1 of 2) intron (NR_038251, intron 1 of 2) 78801 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr4-4695 chr4 86922461 86922671 + 8.48 0.000 Intergenic LTR41C|LTR|ERVL 12284 NR_038841 100506746 Hs.657766 NR_038841 AFF1-AS1 - AFF1 antisense RNA 1 ncRNA chr16-4796 chr16 85844714 85844924 + 8.48 0.000 Intergenic Intergenic 45124 NM_001318802 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr1-8875 chr1 4420895 4421105 + 8.48 0.000 intron (NR_027088, intron 3 of 5) intron (NR_027088, intron 3 of 5) 8949 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr13-3442 chr13 104795560 104795770 + 8.48 0.000 Intergenic Intergenic -670202 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr8-3381 chr8 57692477 57692687 + 8.48 0.000 Intergenic L2c|LINE|L2 -53567 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr1-12015 chr1 98905949 98906159 + 8.48 0.000 intron (NM_001010861, intron 5 of 5) intron (NM_001010861, intron 5 of 5) -98222 NR_033940 100129620 Hs.588631 NR_033940 ENSG00000232825 LOC100129620 - uncharacterized LOC100129620 ncRNA chr18-990 chr18 23593872 23594082 + 8.48 0.000 Intergenic Intergenic -7471 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC|POGZ|SLC65A1 NPC intracellular cholesterol transporter 1 protein-coding chr9-4841 chr9 138139434 138139644 + 8.48 0.000 Intergenic Intergenic -10574 NR_027156 643224 Hs.551805 NR_027156 TUBBP5 - tubulin beta pseudogene 5 pseudo chrX-1486 chrX 139692435 139692645 + 8.48 0.000 intron (NM_001099855, intron 1 of 27) intron (NM_001099855, intron 1 of 27) 15627 NM_001171876 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr11-3454 chr11 67347332 67347542 + 8.48 0.000 intron (NR_024469, intron 2 of 3) AluJo|SINE|Alu 6109 NM_021173 57804 Hs.523829 NM_021173 ENSG00000175482 POLD4 POLDS|p12 DNA polymerase delta 4, accessory subunit protein-coding chr5-4856 chr5 64180919 64181129 + 8.48 0.000 intron (NM_001113561, intron 1 of 7) MLT2A2|LTR|ERVL 15181 NM_001113561 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr8-2978 chr8 88622957 88623167 + 8.48 0.000 Intergenic Intergenic -295579 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr9-3751 chr9 123114917 123115127 + 8.48 0.000 non-coding (NR_026677, exon 1 of 1) non-coding (NR_026677, exon 1 of 1) 455 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chr17-7744 chr17 34249554 34249764 + 8.48 0.000 Intergenic MIRc|SINE|MIR -5626 NM_002982 6347 Hs.303649 NM_002982 ENSG00000108691 CCL2 GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF C-C motif chemokine ligand 2 protein-coding chr8-7140 chr8 121375258 121375468 + 8.48 0.000 Intergenic Intergenic -263983 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr5-4959 chr5 77783339 77783549 + 8.48 0.000 Intergenic ERVL-E-int|LTR|ERVL -7083 NM_001297740 6902 Hs.291212 NM_004607 ENSG00000171530 TBCA - tubulin folding cofactor A protein-coding chrX-4096 chrX 23855018 23855228 + 8.48 0.000 intron (NM_024122, intron 7 of 8) AluJb|SINE|Alu 52815 NR_026545 79135 Hs.495851 NM_024122 ENSG00000184831 APOO FAM121B|MIC26|MICOS26|Mic23|My025 apolipoprotein O protein-coding chr7-7543 chr7 112599316 112599526 + 8.48 0.000 Intergenic AluSx3|SINE|Alu -18644 NR_110160 100996249 Hs.561749 NR_110159 LOC100996249 - uncharacterized LOC100996249 ncRNA chr4-4690 chr4 86443535 86443745 + 8.48 0.000 intron (NM_002753, intron 1 of 13) L1MCa|LINE|L1 9555 NM_002753 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr3-4200 chr3 131157799 131158009 + 8.48 0.000 intron (NM_001353043, intron 10 of 17) L1PA13|LINE|L1 130176 NM_001321223 79858 Hs.657336 NM_024800 ENSG00000114670 NEK11 - NIMA related kinase 11 protein-coding chr14-4233 chr14 99697088 99697298 + 8.48 0.000 intron (NM_006668, intron 3 of 14) L1MEc|LINE|L1 12895 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr22-3762 chr22 27714298 27714508 + 8.48 0.000 Intergenic Intergenic 87353 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr10-4876 chr10 17209432 17209642 + 8.48 0.000 Intergenic Intergenic -7466 NM_001351223 1787 Hs.351665 NM_004412 ENSG00000107614 TRDMT1 DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 tRNA aspartic acid methyltransferase 1 protein-coding chr19-2260 chr19 55179601 55179811 + 8.48 0.000 promoter-TSS (NM_001297774) promoter-TSS (NM_001297774) -358 NM_001297774 6861 Hs.631566 NM_003180 ENSG00000129990 SYT5 - synaptotagmin 5 protein-coding chr17-6667 chr17 75500548 75500758 + 8.48 0.000 TTS (NM_001351203) TTS (NM_001351203) 2105 NR_106843 102466911 NR_106843 ENSG00000284595 MIR6785 hsa-mir-6785 microRNA 6785 ncRNA chr3-5832 chr3 31493149 31493359 + 8.48 0.000 Intergenic MER5A|DNA|hAT-Charlie -39671 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr8-6258 chr8 41291543 41291753 + 8.48 0.000 intron (NM_003012, intron 2 of 2) intron (NM_003012, intron 2 of 2) 17825 NM_003012 6422 Hs.213424 NM_003012 ENSG00000104332 SFRP1 FRP|FRP-1|FRP1|FrzA|SARP2 secreted frizzled related protein 1 protein-coding chr1-11977 chr1 84824402 84824612 + 8.48 0.000 intron (NM_012152, intron 2 of 2) MIRb|SINE|MIR 68699 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding chr21-1937 chr21 45624588 45624798 + 8.48 0.000 Intergenic Intergenic -19032 NM_001348239 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr9-3781 chr9 126463836 126464046 + 8.48 0.000 intron (NM_033446, intron 7 of 9) intron (NM_033446, intron 7 of 9) -53437 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr21-544 chr21 42381345 42381555 + 8.48 0.000 TTS (NM_032405) TTS (NM_032405) 7699 NM_032404 64699 Hs.208600 NM_024022 ENSG00000160183 TMPRSS3 DFNB10|DFNB8|ECHOS1|TADG12 transmembrane serine protease 3 protein-coding chr2-4359 chr2 1275426 1275636 + 8.48 0.000 intron (NM_018968, intron 14 of 16) Tigger1|DNA|TcMar-Tigger -137930 NM_000547 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chr3-10007 chr3 100668502 100668712 + 8.48 0.000 intron (NM_001308362, intron 8 of 9) intron (NM_001308362, intron 8 of 9) 33069 NM_001308362 84873 Hs.334511 NM_032787 ENSG00000144820 ADGRG7 GPR128 adhesion G protein-coupled receptor G7 protein-coding chr3-7924 chr3 145601497 145601707 + 8.48 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 467583 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chrX-4171 chrX 32442894 32443104 + 8.48 0.000 intron (NM_000109, intron 27 of 78) L1ME3F|LINE|L1 -30771 NM_004012 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr2-3316 chr2 138313191 138313401 + 8.48 0.000 Intergenic Intergenic -188474 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr2-12437 chr2 57891248 57891458 + 8.48 0.000 Intergenic Intergenic -16298 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr13-3399 chr13 92096060 92096270 + 8.48 0.000 intron (NM_004466, intron 6 of 7) intron (NM_004466, intron 6 of 7) 256042 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr7-2977 chr7 2465147 2465357 + 8.48 0.000 Intergenic AluSz|SINE|Alu 11131 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr4-6366 chr4 106835885 106836095 + 8.48 0.000 Intergenic Intergenic 200323 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr4-6362 chr4 105894817 105895027 + 8.48 0.000 promoter-TSS (NM_001184691) promoter-TSS (NM_001184691) -549 NM_001033047 255743 Hs.518921 NM_198278 ENSG00000168743 NPNT EGFL6L|POEM nephronectin protein-coding chr15-5171 chr15 92665209 92665419 + 8.48 0.000 Intergenic Intergenic -9539 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr5-7021 chr5 158407292 158407502 + 8.48 0.000 intron (NR_109888, intron 1 of 6) L1ME2|LINE|L1 2376 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr6-4590 chr6 43724147 43724357 + 8.48 0.000 Intergenic Intergenic -36440 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr2-12479 chr2 61727807 61728017 + 8.48 0.000 Intergenic Intergenic 126148 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr8-5154 chr8 81394975 81395185 + 8.48 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 52359 NM_002677 5375 Hs.571512 NM_002677 ENSG00000147588 PMP2 CMT1G|FABP8|M-FABP|MP2|P2 peripheral myelin protein 2 protein-coding chr17-6786 chr17 3974005 3974215 + 8.48 0.000 Intergenic Intergenic -2993 NR_146884 105371496 Hs.579239 NR_146884 LINC01975 - long intergenic non-protein coding RNA 1975 ncRNA chr11-7587 chr11 36030644 36030854 + 8.48 0.000 intron (NM_001304264, intron 1 of 5) intron (NM_001304264, intron 1 of 5) 20651 NR_039769 100616311 NR_039769 ENSG00000263389 MIR3973 - microRNA 3973 ncRNA chrX-2045 chrX 17584081 17584291 + 8.48 0.000 intron (NR_135631, intron 1 of 1) intron (NR_135631, intron 1 of 1) -25059 NR_046632 100873920 Hs.584577 NR_046632 NHS-AS1 - NHS antisense RNA 1 ncRNA chr19-1847 chr19 11887547 11887757 + 8.48 0.000 promoter-TSS (NM_001364730) promoter-TSS (NM_001364730) -130 NM_021915 7620 Hs.565280 NM_021915 ENSG00000198429 ZNF69 Cos5|hZNF3 zinc finger protein 69 protein-coding chr1-14939 chr1 86258473 86258683 + 8.48 0.000 Intergenic Intergenic 99109 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr2-9039 chr2 198697290 198697500 + 8.48 0.000 Intergenic Intergenic -322298 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2-4269 chr2 229022916 229023126 + 8.48 0.000 TTS (NM_001100818) TTS (NM_001100818) 209071 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr20-3967 chr20 34722654 34722864 + 8.48 0.000 intron (NM_001242539, intron 11 of 11) AluSz|SINE|Alu 18040 NM_001329431 58476 Hs.516994 NM_021202 ENSG00000078804 TP53INP2 C20orf110|DOR|PIG-U|PIGU|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding chr9-2396 chr9 133752409 133752619 + 8.48 0.000 Intergenic LTR105_Mam|LTR|ERVL -12559 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-7990 chr1 206068953 206069163 + 8.48 0.000 intron (NM_001007544, intron 1 of 5) intron (NM_001007544, intron 1 of 5) -14537 NM_001369490 440712 Hs.662248 NM_001007544 ENSG00000263961 RHEX C1orf186 regulator of hemoglobinization and erythroid cell expansion protein-coding chr17-7360 chr17 6975195 6975405 + 8.48 0.000 Intergenic MSTB|LTR|ERVL-MaLR -20749 NM_000697 239 Hs.654431 NM_000697 ENSG00000108839 ALOX12 12-LOX|12S-LOX|LOG12 arachidonate 12-lipoxygenase, 12S type protein-coding chr16-3751 chr16 21083481 21083691 + 8.48 0.000 intron (NM_001347886, intron 19 of 61) intron (NM_001347886, intron 19 of 61) 67260 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr7-8128 chr7 27429672 27429882 + 8.48 0.000 Intergenic MER5A1|DNA|hAT-Charlie -182548 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr14-2720 chr14 91119737 91119947 + 8.48 0.000 intron (NM_001286471, intron 1 of 13) MLT2A2|LTR|ERVL 5142 NM_001286471 80017 Hs.309849 NM_024952 ENSG00000133943 DGLUCY C14orf159 D-glutamate cyclase protein-coding chr12-4965 chr12 75497861 75498071 + 8.48 0.000 3' UTR (NM_007043, exon 10 of 10) 3' UTR (NM_007043, exon 10 of 10) 13643 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr11-8814 chr11 11657677 11657887 + 8.48 0.000 Intergenic Intergenic -1060 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr2-5143 chr2 26316889 26317099 + 8.48 0.000 exon (NM_001145168, exon 4 of 13) exon (NM_001145168, exon 4 of 13) 2055 NM_001145168 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr10-4045 chr10 26610187 26610397 + 8.48 0.000 Intergenic MIRc|SINE|MIR 20427 NR_026793 645528 Hs.634511 NR_026793 ENSG00000233261 FAM238A C10orf50|LINC00264|NCRNA00264|bA128B16.2 family with sequence similarity 238 member A ncRNA chr22-1674 chr22 45287072 45287282 + 8.48 0.000 exon (NM_006953, exon 3 of 6) exon (NM_006953, exon 3 of 6) 2228 NM_001167574 7380 Hs.632787 NM_006953 ENSG00000100373 UPK3A UP3A|UPIII|UPIIIA|UPK3 uroplakin 3A protein-coding chr11-2621 chr11 8585082 8585292 + 8.48 0.000 intron (NM_001289058, intron 1 of 13) AluSx|SINE|Alu 8789 NM_001289061 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr1-9967 chr1 80349568 80349778 + 8.48 0.000 Intergenic Intergenic -186082 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr9-4918 chr9 10579317 10579527 + 8.48 0.000 intron (NM_002839, intron 2 of 45) L1PA16|LINE|L1 33580 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr11-10402 chr11 114115703 114115913 + 8.48 0.000 intron (NM_006006, intron 2 of 6) intron (NM_006006, intron 2 of 6) 52597 NM_001354752 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr4-3482 chr4 131439770 131439980 + 8.48 0.000 Intergenic L1PA11|LINE|L1 -324963 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr22-1247 chr22 17972777 17972987 + 8.48 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) 8079 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chr12-5988 chr12 95959295 95959505 + 8.48 0.000 intron (NM_152435, intron 4 of 8) intron (NM_152435, intron 4 of 8) 16069 NM_152435 144193 Hs.424907 NM_152435 ENSG00000139344 AMDHD1 HMFT1272 amidohydrolase domain containing 1 protein-coding chr18-843 chr18 21328279 21328489 + 8.48 0.000 intron (NM_001142966, intron 1 of 32) intron (NM_001142966, intron 1 of 32) 86142 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr12-7102 chr12 45076871 45077081 + 8.48 0.000 Intergenic Intergenic -11565 NR_026583 83956 Hs.650500 NM_032032 RACGAP1P FKSG42 Rac GTPase activating protein 1 pseudogene pseudo chr18-1117 chr18 77071863 77072073 + 8.48 0.000 intron (NM_001025100, intron 2 of 3) intron (NM_001025100, intron 2 of 3) -54913 NM_001025090 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr16-6320 chr16 48809671 48809881 + 8.48 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -199596 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr4-5267 chr4 173642901 173643111 + 8.48 0.000 Intergenic Eulor5A|DNA?|DNA? 112548 NR_003679 79804 Hs.61435 NR_003679 ENSG00000237125 HAND2-AS1 DEIN|NBLA00301|UPH HAND2 antisense RNA 1 ncRNA chr1-5942 chr1 25206874 25207084 + 8.48 0.000 Intergenic MIR|SINE|MIR 25523 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr15-2919 chr15 44370701 44370911 + 8.48 0.000 intron (NR_157849, intron 7 of 9) AluJo|SINE|Alu -56823 NM_016396 51496 Hs.497967 NM_016396 ENSG00000137770 CTDSPL2 HSPC058|HSPC129 CTD small phosphatase like 2 protein-coding chr8-2594 chr8 52695362 52695572 + 8.48 0.000 intron (NM_001083617, intron 1 of 23) MER77|LTR|ERVL 18968 NM_014781 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr9-4000 chr9 31026303 31026513 + 8.48 0.000 Intergenic AluJb|SINE|Alu 355082 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr10-8747 chr10 103713004 103713214 + 8.48 0.000 intron (NM_014631, intron 5 of 13) intron (NM_014631, intron 5 of 13) -33670 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr18-2162 chr18 57986993 57987203 + 8.48 0.000 Intergenic Intergenic -57128 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr13-4037 chr13 73549175 73549385 + 8.48 0.000 Intergenic Intergenic -14964 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr8-6380 chr8 54304590 54304800 + 8.48 0.000 Intergenic HAL1|LINE|L1 -25991 NR_004385 26766 NR_004385 ENSG00000199212 RNU105C E1-5|E1-6 RNA, U105C small nucleolar snoRNA chr18-2762 chr18 508680 508890 + 8.48 0.000 non-coding (NR_136505, exon 3 of 3) non-coding (NR_136505, exon 3 of 3) 6509 NR_136505 105376854 NR_136505 ENSG00000264265 LINC01925 - long intergenic non-protein coding RNA 1925 ncRNA chr10-3423 chr10 35493421 35493631 + 8.48 0.000 intron (NM_181698, intron 4 of 11) intron (NM_181698, intron 4 of 11) -111815 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding chrX-1440 chrX 64395228 64395438 + 8.48 0.000 intron (NM_017677, intron 1 of 13) CpG 119 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr8-4508 chr8 120543678 120543888 + 8.48 0.000 intron (NM_021021, intron 5 of 6) intron (NM_021021, intron 5 of 6) 98364 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr12-3237 chr12 57625650 57625860 + 8.48 0.000 3' UTR (NM_001276468, exon 10 of 10) 3' UTR (NM_001276468, exon 10 of 10) -3852 NR_120450 101927583 Hs.624788 NR_120450 LOC101927583 - uncharacterized LOC101927583 ncRNA chr18-1839 chr18 23051917 23052127 + 8.48 0.000 Intergenic Intergenic -82542 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr3-4210 chr3 133837744 133837954 + 8.48 0.000 intron (NM_001363953, intron 7 of 8) intron (NM_001363953, intron 7 of 8) 32034 NR_163491 58477 Hs.12152 NM_021203 ENSG00000144867 SRPRB APMCF1|SR-beta SRP receptor subunit beta protein-coding chr2-11046 chr2 112147899 112148109 + 8.48 0.000 intron (NM_001128165, intron 1 of 6) intron (NM_001128165, intron 1 of 6) 9619 NM_153214 129804 Hs.437696 NM_153214 ENSG00000144152 FBLN7 TM14 fibulin 7 protein-coding chr17-7175 chr17 79779940 79780150 + 8.48 0.000 intron (NM_032647, intron 3 of 3) intron (NM_032647, intron 3 of 3) 1867 NM_032647 84733 Hs.368410 NM_005189 ENSG00000173894 CBX2 CDCA6|M33|SRXY5 chromobox 2 protein-coding chr2-4189 chr2 193841246 193841456 + 8.48 0.000 Intergenic Intergenic -502918 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr13-3948 chr13 61029157 61029367 + 8.48 0.000 Intergenic Intergenic 170618 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr7-4491 chr7 149759974 149760184 + 8.48 0.000 Intergenic Intergenic 13509 NM_207336 168544 Hs.726477 NM_207336 ENSG00000181444 ZNF467 EZI|Zfp467 zinc finger protein 467 protein-coding chr12-6373 chr12 64744666 64744876 + 8.48 0.000 intron (NM_002076, intron 5 of 13) intron (NM_002076, intron 5 of 13) 14635 NM_002076 2799 Hs.334534 NM_002076 ENSG00000135677 GNS G6S glucosamine (N-acetyl)-6-sulfatase protein-coding chr1-8986 chr1 10320290 10320500 + 8.48 0.000 intron (NM_001365951, intron 23 of 48) intron (NM_001365951, intron 23 of 48) 21429 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr5-4054 chr5 44127116 44127326 + 8.48 0.000 Intergenic L1PB1|LINE|L1 -261511 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr3-2376 chr3 172138075 172138285 + 8.48 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 97649 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr13-3605 chr13 29090816 29091026 + 8.48 0.000 intron (NM_001366651, intron 4 of 14) L1PA15|LINE|L1 66464 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr5-4829 chr5 61394373 61394583 + 8.48 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 62220 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr13-2887 chr13 112673672 112673882 + 8.48 0.000 intron (NM_207440, intron 1 of 2) MLT1E1A|LTR|ERVL-MaLR -16552 NM_015205 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr14-2798 chr14 22019735 22019945 + 8.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR -348823 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr5-5977 chr5 122101741 122101951 + 8.48 0.000 Intergenic Intergenic -23587 NM_002317 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr3-8138 chr3 28171977 28172187 + 8.48 0.000 Intergenic Intergenic -69537 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr2-7618 chr2 26681803 26682013 + 8.48 0.000 Intergenic Intergenic -10814 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr7-5402 chr7 33935735 33935945 + 8.48 0.000 intron (NM_133468, intron 3 of 15) Charlie17a|DNA|hAT-Charlie 30301 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr15-2495 chr15 20331309 20331519 + 8.48 0.000 Intergenic Intergenic 48670 NR_038836 646096 Hs.448789 NR_038836 ENSG00000259156 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo chr22-1477 chr22 20635678 20635888 + 8.48 0.000 Intergenic Intergenic -53772 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin like 4, pseudogene pseudo chr18-3407 chr18 62599717 62599927 + 8.48 0.000 Intergenic L1MB2|LINE|L1 76797 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr16-6831 chr16 81680436 81680646 + 8.48 0.000 intron (NM_030629, intron 10 of 20) intron (NM_030629, intron 10 of 20) 15187 NR_045112 100129617 Hs.657151 NR_045112 LOC100129617 - uncharacterized LOC100129617 ncRNA chr8-2129 chr8 144023915 144024125 + 8.48 0.000 intron (NM_198572, intron 1 of 4) intron (NM_198572, intron 1 of 4) 11740 NM_001134374 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr7-2800 chr7 84981148 84981358 + 8.48 0.000 Intergenic L1PBa1|LINE|L1 140678 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chrX-1427 chrX 46588202 46588412 + 8.48 0.000 intron (NM_019886, intron 1 of 1) intron (NM_019886, intron 1 of 1) 14542 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chr9-2987 chr9 76987710 76987920 + 8.48 0.000 Intergenic Intergenic -31840 NM_001013735 442425 Hs.553843 NM_001013735 ENSG00000204612 FOXB2 bA159H20.4 forkhead box B2 protein-coding chr3-10466 chr3 133879611 133879821 + 8.48 0.000 intron (NM_016577, intron 1 of 7) intron (NM_016577, intron 1 of 7) 16131 NM_001363953 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr8-2830 chr8 129581821 129582031 + 8.48 0.000 intron (NR_130917, intron 1 of 3) intron (NR_130917, intron 1 of 3) -6908 NR_130918 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr4-5539 chr4 121709956 121710166 + 8.48 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -13081 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr8-6436 chr8 60244799 60245009 + 8.48 0.000 intron (NR_135821, intron 3 of 9) intron (NR_135821, intron 3 of 9) 36496 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr1-9604 chr1 45116591 45116801 + 8.48 0.000 intron (NM_020883, intron 1 of 13) intron (NM_020883, intron 1 of 13) 89909 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr9-5017 chr9 26554137 26554347 + 8.48 0.000 Intergenic Intergenic 338560 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr22-2981 chr22 50392398 50392608 + 8.48 0.000 intron (NM_001365836, intron 4 of 25) intron (NM_001365836, intron 4 of 25) -14939 NR_162128 113218480 NR_162128 MIR12114 - microRNA 12114 ncRNA chr13-4475 chr13 113248512 113248722 + 8.48 0.000 intron (NM_001008895, intron 15 of 19) MER2|DNA|TcMar-Tigger -14303 NR_107042 102465874 NR_107042 ENSG00000277942 MIR8075 hsa-mir-8075 microRNA 8075 ncRNA chr12-2476 chr12 64178180 64178390 + 8.48 0.000 Intergenic Intergenic 44011 NM_152440 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr2-10233 chr2 110995289 110995499 + 8.48 0.000 intron (NM_001371254, intron 14 of 18) AluSz|SINE|Alu 120194 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr10-4235 chr10 125729969 125730179 + 8.48 0.000 intron (NM_001202438, intron 8 of 24) intron (NM_001202438, intron 8 of 24) 10365 NR_110859 26098 Hs.468688 NM_015608 ENSG00000107938 EDRF1 C10orf137 erythroid differentiation regulatory factor 1 protein-coding chr12-8189 chr12 122633746 122633956 + 8.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR 62148 NR_162150 113218511 NR_162150 MIR9902-2 - microRNA 9902-2 ncRNA chr7-8518 chr7 54550134 54550344 + 8.48 0.000 exon (NM_001317843, exon 4 of 4) exon (NM_001317843, exon 4 of 4) 4075 NR_133927 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding chr16-4546 chr16 65319878 65320088 + 8.48 0.000 intron (NR_027755, intron 7 of 8) intron (NR_027755, intron 7 of 8) -143410 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr15-3602 chr15 61287826 61288036 + 8.48 0.000 Intergenic THE1B|LTR|ERVL-MaLR -58629 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr6-5615 chr6 44833516 44833726 + 8.48 0.000 intron (NM_181356, intron 12 of 12) intron (NM_181356, intron 12 of 12) -281740 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr11-5466 chr11 75223384 75223594 + 8.48 0.000 Intergenic Intergenic -17285 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr17-2543 chr17 39337877 39338087 + 8.48 0.000 intron (NM_001370209, intron 2 of 13) SVA_D|Retroposon|SVA 40582 NR_162098 113839521 NR_162098 MIR548BC - microRNA 548BC ncRNA chr6-3944 chr6 86589500 86589710 + 8.48 0.000 Intergenic MIRc|SINE|MIR -347923 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr10-8355 chr10 80265950 80266160 + 8.48 0.000 Intergenic Intergenic 18297 NR_136612 100130698 Hs.447456 NR_136612 LOC100130698 - uncharacterized LOC100130698 ncRNA chr4-7910 chr4 107149838 107150048 + 8.48 0.000 Intergenic Intergenic -113630 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr1-11865 chr1 38864161 38864371 + 8.48 0.000 non-coding (NR_037632, exon 4 of 4) non-coding (NR_037632, exon 4 of 4) -4494 NM_022157 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr4-8582 chr4 168840781 168840991 + 8.48 0.000 intron (NM_001367567, intron 1 of 11) AluSg|SINE|Alu 8791 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr7-7032 chr7 133945184 133945394 + 8.48 0.000 intron (NM_021807, intron 14 of 17) MER5B|DNA|hAT-Charlie -120401 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr12-5173 chr12 103738872 103739082 + 8.48 0.000 intron (NM_017564, intron 53 of 68) AluJr|SINE|Alu 102257 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr2-7112 chr2 179837426 179837636 + 8.48 0.000 intron (NM_001352808, intron 1 of 10) intron (NM_001352808, intron 1 of 10) 23377 NR_031659 100302172 NR_031659 ENSG00000221240 MIR1258 MIRN1258|hsa-mir-1258|mir-1258 microRNA 1258 ncRNA chr8-6545 chr8 69105712 69105922 + 8.48 0.000 Intergenic Intergenic -1627 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr19-4780 chr19 33220980 33221190 + 8.48 0.000 intron (NM_019849, intron 1 of 10) L2a|LINE|L2 4765 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr2-13878 chr2 179501597 179501807 + 8.48 0.000 intron (NR_148056, intron 5 of 9) L1MA1|LINE|L1 60886 NR_148055 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr18-1798 chr18 12305419 12305629 + 8.48 0.000 Intergenic MER115|DNA|hAT-Tip100 -2145 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr13-1332 chr13 30877465 30877675 + 8.48 0.000 Intergenic Intergenic -4992 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr4-5649 chr4 8443055 8443265 + 8.48 0.000 intron (NM_152544, intron 1 of 10) L2c|LINE|L2 2363 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr15-4474 chr15 50021480 50021690 + 8.48 0.000 intron (NR_073596, intron 6 of 27) L2a|LINE|L2 91794 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chrX-1228 chrX 81177612 81177822 + 8.48 0.000 intron (NM_030763, intron 1 of 6) L1PA6|LINE|L1 24196 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr4-7926 chr4 108198163 108198373 + 8.48 0.000 Intergenic MIRb|SINE|MIR 26148 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr20-2204 chr20 56787634 56787844 + 8.48 0.000 Intergenic Intergenic 158433 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr12-5939 chr12 75660872 75661082 + 8.48 0.000 Intergenic L2a|LINE|L2 -149368 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr6-4492 chr6 36746523 36746733 + 8.48 0.000 intron (NM_020939, intron 15 of 20) intron (NM_020939, intron 15 of 20) 10772 NM_001314020 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr4-8641 chr4 175308463 175308673 + 8.48 0.000 Intergenic Intergenic 390210 NM_001130704 11086 Hs.126838 NM_014269 ENSG00000168594 ADAM29 CT73|svph1 ADAM metallopeptidase domain 29 protein-coding chr16-4165 chr16 7583522 7583732 + 8.48 0.000 intron (NM_145893, intron 3 of 13) intron (NM_145893, intron 3 of 13) 250782 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr1-8244 chr1 31857104 31857314 + 8.48 0.000 Intergenic AluJr|SINE|Alu -41158 NM_144569 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chr19-6495 chr19 17931271 17931481 + 8.48 0.000 Intergenic AluSx|SINE|Alu -1639 NM_001136203 115098 Hs.100043 NM_138442 ENSG00000007080 CCDC124 - coiled-coil domain containing 124 protein-coding chr16-1121 chr16 11255950 11256160 + 8.48 0.000 intron (NM_003745, intron 1 of 1) CpG 127 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr4-2609 chr4 136864662 136864872 + 8.48 0.000 intron (NR_149105, intron 3 of 3) intron (NR_149105, intron 3 of 3) -328989 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr2-7446 chr2 12168717 12168927 + 8.48 0.000 intron (NR_110196, intron 3 of 5) MIRb|SINE|MIR -30308 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr2-2692 chr2 25301564 25301774 + 8.48 0.000 intron (NR_135490, intron 2 of 23) intron (NR_135490, intron 2 of 23) 27052 NR_031570 100302246 NR_031570 ENSG00000221445 MIR1301 MIRN1301|hsa-mir-1301|mir-1301 microRNA 1301 ncRNA chr20-4046 chr20 37264976 37265186 + 8.48 0.000 Intergenic MIRb|SINE|MIR -8173 NM_001184731 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chr3-10589 chr3 142929158 142929368 + 8.48 0.000 intron (NR_038455, intron 1 of 4) intron (NR_038455, intron 1 of 4) 2588 NR_038455 100507389 Hs.38715 NR_038455 ENSG00000243818 LOC100507389 - uncharacterized LOC100507389 ncRNA chr7-5799 chr7 80635689 80635899 + 8.48 0.000 intron (NM_001371077, intron 1 of 14) intron (NM_001371077, intron 1 of 14) -2722 NM_001001548 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr15-1205 chr15 44578491 44578701 + 8.48 0.000 intron (NM_025137, intron 30 of 39) L1MEf|LINE|L1 41449 NM_003758 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr18-1274 chr18 58584882 58585092 + 8.48 0.000 intron (NM_052947, intron 3 of 12) intron (NM_052947, intron 3 of 12) -15633 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr18-1430 chr18 13216178 13216388 + 8.48 0.000 Intergenic Intergenic -2477 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr15-1151 chr15 66654801 66655011 + 8.48 0.000 intron (NR_110372, intron 1 of 4) CpG -47330 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr3-2562 chr3 82761195 82761405 + 8.48 0.000 Intergenic HERVL-int|LTR|ERVL 775158 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr8-3609 chr8 142602730 142602940 + 8.48 0.000 Intergenic Intergenic 11644 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr2-12759 chr2 85233325 85233535 + 8.48 0.000 intron (NM_031283, intron 3 of 11) AluSc5|SINE|Alu 19778 NR_136323 102724579 Hs.669216 NR_136323 LOC102724579 - uncharacterized LOC102724579 ncRNA chr9-4031 chr9 88171810 88172020 + 8.48 0.000 Intergenic AluJo|SINE|Alu -33434 NM_001350978 645961 Hs.632070 NM_001166137 SPATA31C2 FAM75C2 SPATA31 subfamily C member 2 protein-coding chr19-7010 chr19 49568074 49568284 + 8.48 0.000 intron (NM_001270960, intron 1 of 8) Tigger9b|DNA|TcMar-Tigger 12377 NM_001363649 51070 Hs.7236 NM_015953 ENSG00000142546 NOSIP CGI-25 nitric oxide synthase interacting protein protein-coding chr11-4310 chr11 68626408 68626618 + 8.48 0.000 Intergenic HERVH-int|LTR|ERV1 -58031 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr7-8804 chr7 82998646 82998856 + 8.48 0.000 intron (NM_033026, intron 3 of 24) L1MCa|LINE|L1 164133 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr4-4537 chr4 70196036 70196246 + 8.48 0.000 promoter-TSS (NM_017855) promoter-TSS (NM_017855) -386 NM_017855 54959 Hs.143811 NM_017855 ENSG00000109205 ODAM APIN odontogenic, ameloblast associated protein-coding chr3-6224 chr3 65307316 65307526 + 8.48 0.000 Intergenic Intergenic -586395 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr2-11283 chr2 183550501 183550711 + 8.48 0.000 Intergenic L1PA7|LINE|L1 426163 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding GL000009.2-1 GL000009.2 95165 95375 + 8.48 0.000 NA NA NA NA chr9-8096 chr9 98643770 98643980 + 8.48 0.000 intron (NM_005458, intron 1 of 18) MLT1K|LTR|ERVL-MaLR 65060 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr1-8104 chr1 8923667 8923877 + 8.48 0.000 Intergenic HERVFH21-int|LTR|ERV1 -22096 NM_001270502 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr8-6988 chr8 108084593 108084803 + 8.48 0.000 Intergenic Intergenic -1078 NM_178565 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr4-5183 chr4 158399040 158399250 + 8.48 0.000 Intergenic L1MEc|LINE|L1 -122569 NM_001363776 59350 Hs.591686 NM_021634 ENSG00000171509 RXFP1 LGR7|RXFPR1 relaxin family peptide receptor 1 protein-coding chr17-5459 chr17 40026926 40027136 + 8.48 0.000 promoter-TSS (NR_106944) promoter-TSS (NR_106944) 614 NR_102369 101340251 NR_102369 ENSG00000238793 SNORD124 - small nucleolar RNA, C/D box 124 snoRNA chr4-8115 chr4 126445567 126445777 + 8.48 0.000 Intergenic Intergenic 938413 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr5-5879 chr5 10050028 10050238 + 8.48 0.000 Intergenic Intergenic -146309 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr5-8484 chr5 132844999 132845209 + 8.48 0.000 Intergenic Charlie13a|DNA|hAT-Charlie -14457 NM_001172700 134549 Hs.519574 NM_133456 ENSG00000164403 SHROOM1 APXL2 shroom family member 1 protein-coding chr16-4568 chr16 67026942 67027152 + 8.48 0.000 Intergenic Intergenic -2102 NM_001368709 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding chrX-1578 chrX 72052699 72052909 + 8.48 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) 8395 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr5-8885 chr5 155226414 155226624 + 8.48 0.000 Intergenic L1PA6|LINE|L1 212764 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr1-10721 chr1 195193122 195193332 + 8.48 0.000 Intergenic L2a|LINE|L2 895488 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chrX-1182 chrX 54807699 54807909 + 8.48 0.000 promoter-TSS (NM_177433) promoter-TSS (NM_177433) 59 NM_177433 10916 Hs.522665 NM_014599 ENSG00000102316 MAGED2 11B6|BARTS5|BCG-1|BCG1|HCA10|MAGE-D2 MAGE family member D2 protein-coding chr8-4045 chr8 61874476 61874686 + 8.48 0.000 Intergenic Intergenic -15258 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr6-4965 chr6 104908087 104908297 + 8.48 0.000 Intergenic L1MA3|LINE|L1 32335 NR_046407 100113403 Hs.649249 NR_046407 ENSG00000203809 LIN28B-AS1 C6orf220|LINC00577|dJ439I14.1 LIN28B antisense RNA 1 ncRNA chr8-6084 chr8 26827004 26827214 + 8.48 0.000 intron (NM_001322504, intron 1 of 1) MIR|SINE|MIR 38546 NR_136343 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr17-5106 chr17 5063721 5063931 + 8.48 0.000 Intergenic AluSx1|SINE|Alu -14641 NM_153018 124961 Hs.48832 NM_153018 ENSG00000180787 ZFP3 ZNF752 ZFP3 zinc finger protein protein-coding chr17-5864 chr17 67996766 67996976 + 8.48 0.000 Intergenic AluSz|SINE|Alu -3265 NM_181656 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr3-5485 chr3 189148899 189149109 + 8.48 0.000 Intergenic Intergenic -22967 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr14-2391 chr14 51622447 51622657 + 8.48 0.000 intron (NM_001042481, intron 2 of 14) intron (NM_001042481, intron 2 of 14) -22600 NR_051990 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr10-5677 chr10 99240501 99240711 + 8.48 0.000 Intergenic AluY|SINE|Alu -4731 NM_021828 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding chr11-7061 chr11 120540903 120541113 + 8.48 0.000 intron (NM_014619, intron 1 of 20) intron (NM_014619, intron 1 of 20) -23428 NM_001282470 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr9-6630 chr9 131157137 131157347 + 8.48 0.000 intron (NM_001318324, intron 17 of 35) AluJo|SINE|Alu 31656 NM_005085 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr1-8211 chr1 24820098 24820308 + 8.48 0.000 intron (NM_013943, intron 3 of 5) AluJo|SINE|Alu 74756 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr3-8106 chr3 16684199 16684409 + 8.48 0.000 Intergenic Intergenic -78881 NM_001351 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr1-10854 chr1 204629089 204629299 + 8.48 0.000 intron (NM_201630, intron 1 of 1) L2c|LINE|L2 56544 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr8-3808 chr8 28445753 28445963 + 8.48 0.000 intron (NM_001258211, intron 6 of 7) intron (NM_001258211, intron 6 of 7) 44371 NM_172366 157574 Hs.741522 NM_172366 ENSG00000214050 FBXO16 FBX16 F-box protein 16 protein-coding chr1-8881 chr1 4965349 4965559 + 8.48 0.000 Intergenic Intergenic 310845 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr15-3096 chr15 64145598 64145808 + 8.48 0.000 Intergenic Intergenic -6028 NM_024798 79856 Hs.744250 NM_024798 ENSG00000157734 SNX22 - sorting nexin 22 protein-coding chrX-2272 chrX 49166548 49166758 + 8.48 0.000 3' UTR (NM_024859, exon 6 of 6) 3' UTR (NM_024859, exon 6 of 6) 3810 NM_001099681 79917 Hs.193170 NM_024859 ENSG00000269313 MAGIX JM10|PDZX MAGI family member, X-linked protein-coding chr5-6590 chr5 28147538 28147748 + 8.48 0.000 Intergenic Intergenic 140022 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr22-2389 chr22 50008631 50008841 + 8.48 0.000 intron (NM_001371416, intron 1 of 14) intron (NM_001371416, intron 1 of 14) 4029 NM_001001694 400935 Hs.526712 NM_001001694 ENSG00000188263 IL17REL - interleukin 17 receptor E like protein-coding chr8-2718 chr8 100414676 100414886 + 8.48 0.000 Intergenic Intergenic 32018 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr19-2412 chr19 29766086 29766296 + 8.48 0.000 Intergenic Intergenic -45800 NM_001238 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr3-4561 chr3 154467285 154467495 + 8.48 0.000 Intergenic Intergenic -37200 NM_001038705 344758 Hs.376338 NM_001038705 ENSG00000174948 GPR149 IEDA|PGR10|R35 G protein-coupled receptor 149 protein-coding chr8-4658 chr8 135764031 135764241 + 8.48 0.000 Intergenic Intergenic 306680 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr10-5928 chr10 120303683 120303893 + 8.48 0.000 Intergenic L1MEc|LINE|L1 51435 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr8-4528 chr8 122990637 122990847 + 8.48 0.000 Intergenic LTR33|LTR|ERVL 35030 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr7-8199 chr7 31662678 31662888 + 8.48 0.000 Intergenic L2|LINE|L2 -24234 NM_001145123 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr12-5078 chr12 93407471 93407681 + 8.48 0.000 3' UTR (NM_001301023, exon 5 of 5) 3' UTR (NM_001301023, exon 5 of 5) 28998 NM_001301024 11163 Hs.506325 NM_019094 ENSG00000173598 NUDT4 DIPP-2B|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P|NUDT4B nudix hydrolase 4 protein-coding chr9-5558 chr9 110599542 110599752 + 8.48 0.000 Intergenic L1PA12|LINE|L1 -19906 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr12-4555 chr12 27682618 27682828 + 8.48 0.000 intron (NM_003622, intron 24 of 29) intron (NM_003622, intron 24 of 29) -13724 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr7-8052 chr7 22355375 22355585 + 8.48 0.000 intron (NM_012294, intron 1 of 25) intron (NM_012294, intron 1 of 25) 1674 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr6-2809 chr6 152090203 152090413 + 8.48 0.000 intron (NM_001328100, intron 6 of 6) intron (NM_001328100, intron 6 of 6) 77979 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr6-7148 chr6 36403091 36403301 + 8.48 0.000 intron (NM_152990, intron 3 of 4) MER5B|DNA|hAT-Charlie -15396 NM_001207037 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr13-4218 chr13 94063050 94063260 + 8.48 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) 124836 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr3-10918 chr3 172857339 172857549 + 8.48 0.000 Intergenic Intergenic 106442 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr12-8076 chr12 117046244 117046454 + 8.48 0.000 intron (NR_031766, intron 6 of 7) intron (NR_031766, intron 6 of 7) 53067 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr1-10638 chr1 181332944 181333154 + 8.48 0.000 Intergenic Intergenic 96661 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr8-5847 chr8 6477675 6477885 + 8.48 0.000 intron (NM_024596, intron 10 of 13) intron (NM_024596, intron 10 of 13) 70627 NM_001322045 79648 Hs.593807 NM_024596 ENSG00000147316 MCPH1 BRIT1|MCT microcephalin 1 protein-coding chr19-3736 chr19 45320300 45320510 + 8.48 0.000 intron (NM_001824, intron 1 of 7) intron (NM_001824, intron 1 of 7) 2470 NM_001824 1158 Hs.334347 NM_001824 ENSG00000104879 CKM CKMM|CPK-M|M-CK creatine kinase, M-type protein-coding chr9-5729 chr9 126155672 126155882 + 8.48 0.000 Intergenic Intergenic 120138 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr15-3573 chr15 42814356 42814566 + 8.48 0.000 intron (NM_173500, intron 7 of 14) AluJr4|SINE|Alu -77333 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr3-7508 chr3 168117296 168117506 + 8.48 0.000 Intergenic Intergenic -21477 NM_001308155 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr13-2753 chr13 98528338 98528548 + 8.48 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) -6318 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr7-5180 chr7 7793998 7794208 + 8.48 0.000 intron (NM_001302350, intron 3 of 4) MER103C|DNA|hAT-Charlie -75496 NM_002947 6119 Hs.487540 NM_002947 ENSG00000106399 RPA3 REPA3|RP-A p14 replication protein A3 protein-coding chr1-8477 chr1 117715206 117715416 + 8.48 0.000 Intergenic L1PBa|LINE|L1 109263 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr14-4549 chr14 43885112 43885322 + 8.48 0.000 Intergenic Intergenic 622066 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr2-10290 chr2 131031812 131032022 + 8.48 0.000 intron (NM_001367493, intron 5 of 13) intron (NM_001367493, intron 5 of 13) 61245 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr9-8388 chr9 118779205 118779415 + 8.48 0.000 Intergenic Intergenic 99639 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr1-13521 chr1 6042202 6042412 + 8.48 0.000 intron (NM_001199861, intron 3 of 15) intron (NM_001199861, intron 3 of 15) -3581 NM_001199862 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr12-5111 chr12 96541223 96541433 + 8.48 0.000 intron (NM_001306084, intron 14 of 67) AluSz|SINE|Alu 51751 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr14-2610 chr14 57964655 57964865 + 8.48 0.000 Intergenic Intergenic -98668 NM_001306087 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr3-5329 chr3 129371179 129371389 + 8.48 0.000 Intergenic Intergenic 26064 NR_002992 677797 Hs.711399 NR_002992 ENSG00000207088 SNORA7B ACA7B small nucleolar RNA, H/ACA box 7B snoRNA chr3-4789 chr3 122328463 122328673 + 8.48 0.000 intron (NM_005213, intron 1 of 2) MIRc|SINE|MIR 3320 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr5-4500 chr5 10937681 10937891 + 8.48 0.000 Intergenic L2a|LINE|L2 -176552 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr22-1551 chr22 36511641 36511851 + 8.48 0.000 exon (NM_003753, exon 14 of 15) exon (NM_003753, exon 14 of 15) -4706 NM_001363041 80020 Hs.387601 NM_024955 ENSG00000100350 FOXRED2 ERFAD FAD dependent oxidoreductase domain containing 2 protein-coding chr2-13846 chr2 177090908 177091118 + 8.48 0.000 Intergenic MIRc|SINE|MIR 121398 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr22-3148 chr22 25750331 25750541 + 8.48 0.000 intron (NM_001318245, intron 1 of 43) intron (NM_001318245, intron 1 of 43) 8248 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr3-5605 chr3 9165983 9166193 + 8.48 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -26405 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr6-6528 chr6 129985784 129985994 + 8.48 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -32480 NM_032438 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr2-13008 chr2 107188098 107188308 + 8.48 0.000 intron (NR_049853, intron 2 of 3) L1PA13|LINE|L1 161322 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr20-3567 chr20 3247675 3247885 + 8.48 0.000 Intergenic Intergenic -8590 NR_135000 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr6-3836 chr6 39909576 39909786 + 8.48 0.000 intron (NM_001358531, intron 8 of 9) intron (NM_001358531, intron 8 of 9) -12301 NR_125831 100505635 Hs.668513 NR_125831 ENSG00000235033 LOC100505635 - uncharacterized LOC100505635 ncRNA chr12-2023 chr12 48753492 48753702 + 8.48 0.000 intron (NM_001351125, intron 2 of 4) intron (NM_001351125, intron 2 of 4) 18440 NR_039850 100616262 NR_039850 ENSG00000264201 MIR4701 - microRNA 4701 ncRNA chr17-5551 chr17 44310987 44311197 + 8.48 0.000 intron (NM_001144825, intron 1 of 10) MIR|SINE|MIR 2491 NM_001144825 10900 Hs.500197 NM_006695 ENSG00000108309 RUNDC3A RAP2IP|RPIP-8|RPIP8 RUN domain containing 3A protein-coding chr11-7578 chr11 32817498 32817708 + 8.48 0.000 Intergenic Intergenic -12324 NM_024081 79056 Hs.471695 NM_024081 ENSG00000135378 PRRG4 PRGP4|TMG4 proline rich and Gla domain 4 protein-coding chr10-6194 chr10 27957075 27957285 + 8.48 0.000 intron (NM_001290021, intron 3 of 13) intron (NM_001290021, intron 3 of 13) 24691 NM_001290021 55130 Hs.127530 NM_018076 ENSG00000169126 ARMC4 CILD23 armadillo repeat containing 4 protein-coding chr10-7723 chr10 31126724 31126934 + 8.48 0.000 Intergenic LTR16A|LTR|ERVL -61054 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr12-7104 chr12 45126124 45126334 + 8.48 0.000 Intergenic Intergenic -60818 NR_026583 83956 Hs.650500 NM_032032 RACGAP1P FKSG42 Rac GTPase activating protein 1 pseudogene pseudo chr10-8521 chr10 91768069 91768279 + 8.48 0.000 Intergenic MLT2F|LTR|ERVL 30022 NR_108070 100507633 Hs.291528 NR_108070 ENSG00000228701 TNKS2-AS1 - TNKS2 antisense RNA 1 (head to head) ncRNA chr20-3982 chr20 35342173 35342383 + 8.48 0.000 intron (NM_001184977, intron 5 of 7) intron (NM_001184977, intron 5 of 7) -49853 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr1-16556 chr1 233946074 233946284 + 8.48 0.000 intron (NM_173508, intron 2 of 7) Charlie25|DNA|hAT-Charlie 41503 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr18-2152 chr18 57547814 57548024 + 8.48 0.000 3' UTR (NM_001012515, exon 11 of 11) 3' UTR (NM_001012515, exon 11 of 11) 38783 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr1-12082 chr1 154194727 154194937 + 8.48 0.000 Intergenic Intergenic -1089 NR_030600 100126346 NR_030600 ENSG00000215938 MIR190B MIRN190B|mir-190b microRNA 190b ncRNA chr13-3678 chr13 34581165 34581375 + 8.48 0.000 intron (NR_047036, intron 1 of 2) L3|LINE|CR1 59415 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr12-4081 chr12 54571753 54571963 + 8.48 0.000 intron (NM_001165975, intron 5 of 14) intron (NM_001165975, intron 5 of 14) 10393 NM_001315534 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding chr3-9133 chr3 31305831 31306041 + 8.48 0.000 Intergenic Intergenic -144149 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr1-13567 chr1 7872765 7872975 + 8.48 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -19379 NM_021995 10911 Hs.715862 NM_006786 ENSG00000049247 UTS2 PRO1068|U-II|UCN2|UII urotensin 2 protein-coding chr15-3636 chr15 79197994 79198204 + 8.48 0.000 intron (NR_038997, intron 1 of 1) intron (NR_038997, intron 1 of 1) -11689 NR_029705 406960 NR_029705 ENSG00000207695 MIR184 EDICT|MIRN184|miR-184 microRNA 184 ncRNA chr9-6586 chr9 125029522 125029732 + 8.48 0.000 intron (NM_173690, intron 5 of 18) intron (NM_173690, intron 5 of 18) -88544 NM_002077 2800 Hs.59504 NM_002077 ENSG00000136935 GOLGA1 golgin-97 golgin A1 protein-coding chr3-6785 chr3 143375949 143376159 + 8.48 0.000 intron (NM_173653, intron 13 of 15) intron (NM_173653, intron 13 of 15) 33808 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr2-14594 chr2 232533843 232534053 + 8.48 0.000 exon (NM_000751, exon 10 of 12) exon (NM_000751, exon 10 of 12) -5744 NM_005199 1146 Hs.248101 NM_005199 ENSG00000196811 CHRNG ACHRG cholinergic receptor nicotinic gamma subunit protein-coding chr19-6757 chr19 39440093 39440303 + 8.48 0.000 Intergenic Intergenic -4249 NM_001020 6217 Hs.397609 NM_001020 ENSG00000105193 RPS16 S16 ribosomal protein S16 protein-coding chr10-4794 chr10 7211232 7211442 + 8.48 0.000 intron (NM_001029880, intron 11 of 20) intron (NM_001029880, intron 11 of 20) -24553 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr3-8440 chr3 118226798 118227008 + 8.48 0.000 Intergenic Intergenic -414865 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr3-7217 chr3 193134902 193135112 + 8.48 0.000 Intergenic Intergenic -106215 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr13-2712 chr13 93376341 93376551 + 8.48 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 149639 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr16-4858 chr16 88267361 88267571 + 8.48 0.000 Intergenic Intergenic 73185 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr17-5961 chr17 76626284 76626494 + 8.48 0.000 exon (NM_018414, exon 6 of 9) exon (NM_018414, exon 6 of 9) 17368 NM_018414 55808 Hs.105352 NM_018414 ENSG00000070526 ST6GALNAC1 HSY11339|SIAT7A|ST6GalNAcI|STYI ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 protein-coding chrX-1803 chrX 87559740 87559950 + 8.48 0.000 intron (NM_057162, intron 1 of 10) intron (NM_057162, intron 1 of 10) 42043 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr16-4828 chr16 87407617 87407827 + 8.48 0.000 3' UTR (NM_015144, exon 13 of 13) 3' UTR (NM_015144, exon 13 of 13) 15386 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr5-5768 chr5 173252807 173253017 + 8.48 0.000 Intergenic THE1D|LTR|ERVL-MaLR -17706 NM_001166176 1482 Hs.54473 NM_004387 ENSG00000183072 NKX2-5 CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3 NK2 homeobox 5 protein-coding chr2-5518 chr2 150013072 150013282 + 8.48 0.000 Intergenic Intergenic -153986 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr8-5419 chr8 30858102 30858312 + 8.48 0.000 intron (NR_146525, intron 6 of 6) L1ME3D|LINE|L1 30499 NR_146525 56154 Hs.458316 NM_001350162 ENSG00000133863 TEX15 CT42|SPGF25 testis expressed 15, meiosis and synapsis associated protein-coding chr19-4806 chr19 35142368 35142578 + 8.48 0.000 promoter-TSS (NM_022006) promoter-TSS (NM_022006) -782 NM_022006 53822 Hs.134729 NM_022006 ENSG00000221946 FXYD7 - FXYD domain containing ion transport regulator 7 protein-coding chr14-4327 chr14 22613873 22614083 + 8.48 0.000 Intergenic MER5A|DNA|hAT-Charlie 15740 NM_022060 63874 Hs.445665 NM_022060 ENSG00000100439 ABHD4 ABH4 abhydrolase domain containing 4 protein-coding chr12-4540 chr12 26112823 26113033 + 8.48 0.000 Intergenic Intergenic 12109 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr7-4359 chr7 55037330 55037540 + 8.48 0.000 intron (NM_001346941, intron 1 of 21) L3|LINE|CR1 18403 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr5-3939 chr5 386613 386823 + 8.48 0.000 intron (NM_020731, intron 4 of 11) MLT1D|LTR|ERVL-MaLR 56442 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr4-2856 chr4 61921879 61922089 + 8.48 0.000 intron (NM_001322246, intron 12 of 25) L1MC4a|LINE|L1 239781 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr1-14664 chr1 59656257 59656467 + 8.48 0.000 intron (NM_001350790, intron 12 of 16) intron (NM_001350790, intron 12 of 16) 76934 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr17-4739 chr17 39831547 39831757 + 8.48 0.000 intron (NM_012481, intron 2 of 7) MER58C|DNA|hAT-Charlie 32536 NM_001284514 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr14-3844 chr14 75523844 75524054 + 8.48 0.000 intron (NM_006399, intron 1 of 2) intron (NM_006399, intron 1 of 2) 1480 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr5-7446 chr5 31630667 31630877 + 8.48 0.000 Intergenic L2b|LINE|L2 -8359 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr9-7865 chr9 86041472 86041682 + 8.48 0.000 intron (NM_016548, intron 5 of 9) MER21C|LTR|ERVL 57981 NM_016548 51280 Hs.494337 NM_016548 ENSG00000135052 GOLM1 C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 golgi membrane protein 1 protein-coding chr6-5453 chr6 158621457 158621667 + 8.48 0.000 intron (NM_020823, intron 10 of 16) intron (NM_020823, intron 10 of 16) 11855 NR_106981 102465694 NR_106981 ENSG00000278571 MIR7161 hsa-mir-7161 microRNA 7161 ncRNA chr22-885 chr22 48620611 48620821 + 8.48 0.000 intron (NM_015381, intron 1 of 3) (CATC)n|Simple_repeat|Simple_repeat 44376 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr5-6411 chr5 150719739 150719949 + 8.48 0.000 intron (NM_001135643, intron 10 of 13) intron (NM_001135643, intron 10 of 13) -18782 NM_018047 55696 Hs.713564 NM_018047 ENSG00000086589 RBM22 Cwc2|ZC3H16|fSAP47 RNA binding motif protein 22 protein-coding chr5-1598 chr5 32585903 32586113 + 8.48 0.000 intron (NM_006713, intron 1 of 4) CpG 451 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chrX-3721 chrX 118360710 118360920 + 8.48 0.000 intron (NM_001184966, intron 1 of 17) intron (NM_001184966, intron 1 of 17) 14709 NM_001184965 54521 Hs.98510 NM_019045 ENSG00000131725 WDR44 RAB11BP|RPH11|SYM-4 WD repeat domain 44 protein-coding chr3-2514 chr3 9704422 9704632 + 8.48 0.000 intron (NM_001308388, intron 1 of 19) CpG 694 NM_001308388 151835 Hs.121335 NM_153635 ENSG00000144550 CPNE9 - copine family member 9 protein-coding chr13-2559 chr13 66302166 66302376 + 8.48 0.000 TTS (NM_203487) TTS (NM_203487) 84021 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr12-6275 chr12 46770232 46770442 + 8.48 0.000 intron (NM_018018, intron 14 of 16) intron (NM_018018, intron 14 of 16) 55660 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr13-2462 chr13 49988288 49988498 + 8.48 0.000 intron (NR_152566, intron 13 of 13) intron (NR_152566, intron 13 of 13) 8108 NR_037407 100500908 NR_037407 ENSG00000264864 MIR3613 - microRNA 3613 ncRNA chr3-2615 chr3 177781838 177782048 + 8.48 0.000 Intergenic Intergenic -34922 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr1-12151 chr1 178383082 178383292 + 8.48 0.000 intron (NM_004841, intron 1 of 15) intron (NM_004841, intron 1 of 15) 41736 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr12-7444 chr12 62160066 62160276 + 8.48 0.000 intron (NM_178539, intron 1 of 4) intron (NM_178539, intron 1 of 4) 32668 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr15-5011 chr15 81609919 81610129 + 8.48 0.000 Intergenic Intergenic -235811 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr3-6284 chr3 72205635 72205845 + 8.48 0.000 Intergenic Intergenic 54483 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr6-7934 chr6 110664872 110665082 + 8.48 0.000 intron (NM_001300963, intron 5 of 13) L2c|LINE|L2 -149644 NM_001287215 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr4-6071 chr4 7864373 7864583 + 8.48 0.000 intron (NM_198595, intron 3 of 16) intron (NM_198595, intron 3 of 16) 7830 NM_001371090 chr22-1862 chr22 39647114 39647324 + 8.48 0.000 intron (NM_001003406, intron 8 of 35) intron (NM_001003406, intron 8 of 35) 76466 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr1-14116 chr1 31219415 31219625 + 8.48 0.000 intron (NM_024522, intron 1 of 6) MER115|DNA|hAT-Tip100 20367 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr7-5262 chr7 20117060 20117270 + 8.48 0.000 intron (NR_110114, intron 1 of 5) intron (NR_110114, intron 1 of 5) 23261 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr13-1620 chr13 50386458 50386668 + 8.48 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 140886 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr12-7456 chr12 63327575 63327785 + 8.48 0.000 Intergenic Intergenic -174870 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr6-7238 chr6 41369115 41369325 + 8.48 0.000 Intergenic Intergenic 33612 NM_004828 9436 Hs.194721 NM_004828 ENSG00000096264 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding chr11-6910 chr11 107689650 107689860 + 8.48 0.000 Intergenic Intergenic 22301 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr11-9221 chr11 39365953 39366163 + 8.48 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 717200 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr3-4083 chr3 101017058 101017268 + 8.48 0.000 Intergenic Intergenic -23673 NM_001349330 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr7-1532 chr7 100937528 100937738 + 8.48 0.000 Intergenic AluJr|SINE|Alu -11901 NM_005960 4584 Hs.703577 NM_005960 ENSG00000169894 MUC3A MUC-3A|MUC3 mucin 3A, cell surface associated protein-coding chr7-8498 chr7 51746886 51747096 + 8.48 0.000 Intergenic Intergenic -353735 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr10-8005 chr10 61249748 61249958 + 8.48 0.000 Intergenic Intergenic -202786 NR_120643 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr5-3904 chr5 159639827 159640037 + 8.48 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -173656 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr2-7309 chr2 240397515 240397725 + 8.48 0.000 Intergenic MIRb|SINE|MIR -38043 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr10-5051 chr10 36989023 36989233 + 8.48 0.000 Intergenic LTR12C|LTR|ERV1 -136729 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr11-4871 chr11 36538960 36539170 + 8.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -28793 NM_004620 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr2-6140 chr2 229822222 229822432 + 8.48 0.000 intron (NM_001348330, intron 8 of 41) L1MEg|LINE|L1 99352 NM_001348334 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr1-15650 chr1 164166548 164166758 + 8.48 0.000 Intergenic L1PA6|LINE|L1 -392707 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr13-2483 chr13 51796297 51796507 + 8.48 0.000 intron (NM_001031719, intron 2 of 7) intron (NM_001031719, intron 2 of 7) 7760 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr11-9494 chr11 62583309 62583519 + 8.48 0.000 intron (NM_022830, intron 2 of 8) AluSp|SINE|Alu 8109 NM_001367906 64852 Hs.728983 NM_022830 ENSG00000149016 TUT1 PAPD2|RBM21|STARPAP|TENT1|TUTase|URLC6 terminal uridylyl transferase 1, U6 snRNA-specific protein-coding chr7-8612 chr7 67786397 67786607 + 8.48 0.000 Intergenic Intergenic -233751 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr2-7192 chr2 212124666 212124876 + 8.48 0.000 exon (NM_005235, exon 2 of 28) exon (NM_005235, exon 2 of 28) 301589 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr20-3489 chr20 60921460 60921670 + 8.48 0.000 Intergenic Intergenic -157499 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LINC01718 - long intergenic non-protein coding RNA 1718 ncRNA chr4-6972 chr4 20840174 20840384 + 8.48 0.000 intron (NM_025221, intron 2 of 7) MER68|LTR|ERVL 10389 NM_147181 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr8-2401 chr8 65706032 65706242 + 8.48 0.000 intron (NM_001145839, intron 5 of 6) intron (NM_001145839, intron 5 of 6) 36264 NM_001145838 9650 Hs.584788 NM_014637 ENSG00000066855 MTFR1 CHPPR|FAM54A2 mitochondrial fission regulator 1 protein-coding chr9-4172 chr9 19084206 19084416 + 8.48 0.000 intron (NM_001270890, intron 7 of 16) L1ME3A|LINE|L1 18593 NM_001270890 54801 Hs.533468 NM_017645 ENSG00000147874 HAUS6 Dgt6|FAM29A HAUS augmin like complex subunit 6 protein-coding chr5-7393 chr5 23709779 23709989 + 8.48 0.000 Intergenic Intergenic 202229 NM_001310214 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding chr11-5190 chr11 10994896 10995106 + 8.48 0.000 Intergenic AluJb|SINE|Alu 136784 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr7-4006 chr7 141862469 141862679 + 8.48 0.000 Intergenic Intergenic -21089 NM_001370403 136242 Hs.98947 NM_001008270 ENSG00000165076 PRSS37 TRYX2 serine protease 37 protein-coding chr6-4545 chr6 40773718 40773928 + 8.48 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -186459 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr4-4348 chr4 38162386 38162596 + 8.48 0.000 Intergenic LTR78|LTR|ERV1 42537 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr2-13871 chr2 178869725 178869935 + 8.48 0.000 intron (NM_173648, intron 14 of 23) intron (NM_173648, intron 14 of 23) -62407 NM_001256850 7273 Hs.134602 NM_003319 ENSG00000155657 TTN CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|LGMDR10|MYLK5|SALMY|TMD titin protein-coding chr9-5640 chr9 121082377 121082587 + 8.48 0.000 intron (NM_001369895, intron 2 of 31) Tigger3b|DNA|TcMar-Tigger -5814 NM_007018 11064 Hs.653263 NM_007018 ENSG00000119397 CNTRL CEP1|CEP110|FAN|bA165P4.1 centriolin protein-coding chr18-3483 chr18 71565804 71566014 + 8.48 0.000 intron (NR_038326, intron 1 of 4) L2|LINE|L2 13047 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr3-6386 chr3 94499340 94499550 + 8.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR 436384 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr1-13031 chr1 164961693 164961903 + 8.48 0.000 Intergenic MIR3|SINE|MIR -187157 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr1-15984 chr1 195637701 195637911 + 8.48 0.000 Intergenic Intergenic 450909 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chrX-962 chrX 103063557 103063767 + 8.48 0.000 5' UTR (NM_018476, exon 2 of 3) 5' UTR (NM_018476, exon 2 of 3) 509 NM_018476 55859 Hs.334370 NM_018476 ENSG00000133169 BEX1 BEX2|HBEX2|HGR74-h brain expressed X-linked 1 protein-coding chr17-3894 chr17 50576092 50576302 + 8.48 0.000 exon (NM_001256328, exon 8 of 35) exon (NM_001256328, exon 8 of 35) -14089 NR_038439 253962 Hs.558704 NR_038439 ENSG00000250107 CACNA1G-AS1 CAS1 CACNA1G antisense RNA 1 ncRNA chrX-1259 chrX 103254150 103254360 + 8.48 0.000 intron (NM_001006684, intron 1 of 1) intron (NM_001006684, intron 1 of 1) 900 NM_153333 90843 Hs.389734 NM_153333 ENSG00000180964 TCEAL8 WEX3 transcription elongation factor A like 8 protein-coding chr6-4546 chr6 40807404 40807614 + 8.48 0.000 Intergenic MLT2A2|LTR|ERVL 215771 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr13-3283 chr13 44755946 44756156 + 8.48 0.000 Intergenic Intergenic 53579 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr21-986 chr21 10526780 10526990 + 8.48 0.000 intron (NM_199260, intron 2 of 21) MIR|SINE|MIR 5371 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr2-7488 chr2 17557157 17557367 + 8.48 0.000 intron (NM_001366806, intron 1 of 3) intron (NM_001366806, intron 1 of 3) 16566 NM_003385 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr17-4835 chr17 59264438 59264648 + 8.48 0.000 intron (NM_182569, intron 6 of 9) AluSx1|SINE|Alu 44032 NM_001165993 284161 Hs.631744 NM_182569 ENSG00000153982 GDPD1 GDE4 glycerophosphodiester phosphodiesterase domain containing 1 protein-coding chr20-3277 chr20 5732028 5732238 + 8.48 0.000 Intergenic Intergenic -18254 NM_001303477 149840 Hs.529340 NM_152504 ENSG00000171984 SHLD1 C20orf196|RINN3 shieldin complex subunit 1 protein-coding chrX-4337 chrX 46780139 46780349 + 8.48 0.000 Intergenic LTR16A|LTR|ERVL -21126 NM_032591 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr10-4939 chr10 25893013 25893223 + 8.48 0.000 Intergenic Intergenic 40592 NR_120650 101929073 Hs.409816 NR_120650 ENSG00000226304 LOC101929073 - uncharacterized LOC101929073 ncRNA chr7-8744 chr7 76906941 76907151 + 8.48 0.000 Intergenic PrimLTR79|LTR|ERV1 -73776 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr5-5372 chr5 133443544 133443754 + 8.48 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) -15943 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr1-12460 chr1 16193536 16193746 + 8.48 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 19011 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr10-5676 chr10 99047687 99047897 + 8.48 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) -123224 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr12-5607 chr12 50254134 50254344 + 8.48 0.000 intron (NM_016357, intron 1 of 10) intron (NM_016357, intron 1 of 10) -20027 NR_031625 100302220 NR_031625 ENSG00000221604 MIR1293 MIRN1293|hsa-mir-1293|mir-1293 microRNA 1293 ncRNA chr20-2130 chr20 35014700 35014910 + 8.48 0.000 intron (NM_199368, intron 10 of 18) intron (NM_199368, intron 10 of 18) -24333 NR_039912 100616134 NR_039912 ENSG00000283441 MIR499B MIR499A|hsa-mir-499b microRNA 499b ncRNA chr5-8541 chr5 135465204 135465414 + 8.48 0.000 Intergenic Intergenic -12958 NM_001099221 497189 Hs.552091 NM_001099221 ENSG00000255833 TIFAB - TIFA inhibitor protein-coding chr1-11197 chr1 242033464 242033674 + 8.48 0.000 Intergenic LTR85a|LTR|Gypsy? -34471 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr6-4759 chr6 71873023 71873233 + 8.48 0.000 Intergenic HERV16-int|LTR|ERVL -13575 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr22-4037 chr22 41340807 41341017 + 8.48 0.000 intron (NM_017590, intron 10 of 22) intron (NM_017590, intron 10 of 22) -26421 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr21-989 chr21 10629162 10629372 + 8.48 0.000 Intergenic L1MA5|LINE|L1 107753 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr21-1012 chr21 17881407 17881617 + 8.48 0.000 intron (NR_024354, intron 1 of 2) intron (NR_024354, intron 1 of 2) 4096 NR_024354 54075 Hs.404306 NR_024354 CHODL-AS1 C21orf39|NCRNA00157 CHODL antisense RNA 1 ncRNA chr1-9599 chr1 44738387 44738597 + 8.48 0.000 Intergenic SVA_B|Retroposon|SVA -1345 NM_001297655 11004 Hs.720061 NM_006845 ENSG00000142945 KIF2C CT139|KNSL6|MCAK kinesin family member 2C protein-coding chr14-3551 chr14 104899968 104900178 + 8.48 0.000 Intergenic L1ME3|LINE|L1 -24806 NM_138790 122618 Hs.407101 NM_138790 ENSG00000166428 PLD4 C14orf175 phospholipase D family member 4 protein-coding chr22-2311 chr22 38084941 38085151 + 8.48 0.000 3' UTR (NM_025045, exon 14 of 14) 3' UTR (NM_025045, exon 14 of 14) -1883 NM_013356 23539 Hs.745256 NM_013356 ENSG00000100156 SLC16A8 MCT3|REMP solute carrier family 16 member 8 protein-coding chr11-4502 chr11 115136050 115136260 + 8.48 0.000 Intergenic Intergenic -197422 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr8-3882 chr8 38173072 38173282 + 8.48 0.000 intron (NR_045493, intron 1 of 3) intron (NR_045493, intron 1 of 3) 3316 NM_014462 27257 Hs.425311 NM_014462 ENSG00000175324 LSM1 CASM|YJL124C LSM1 homolog, mRNA degradation associated protein-coding chr2-11022 chr2 106590038 106590248 + 8.48 0.000 Intergenic Intergenic 102779 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr12-7908 chr12 108263210 108263420 + 8.48 0.000 Intergenic Intergenic 57347 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding GL000218.1-9 GL000218.1 42452 42662 + 8.48 0.000 NA NA NA NA chr8-4759 chr8 143234628 143234838 + 8.48 0.000 Intergenic MIR|SINE|MIR -12206 NM_001271156 286128 Hs.668016 NM_173832 ENSG00000181638 ZFP41 ZNF753|zfp-41 ZFP41 zinc finger protein protein-coding chr17-5237 chr17 17520184 17520394 + 8.48 0.000 intron (NM_148173, intron 3 of 6) intron (NM_148173, intron 3 of 6) -23894 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr14-4806 chr14 67166457 67166667 + 8.48 0.000 intron (NM_001024218, intron 19 of 21) intron (NM_001024218, intron 19 of 21) -22878 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding chr7-8732 chr7 76084752 76084962 + 8.48 0.000 Intergenic Intergenic 23905 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr7-9291 chr7 126490781 126490991 + 8.48 0.000 intron (NM_001371085, intron 9 of 10) MIRb|SINE|MIR 567298 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr12-8271 chr12 125214626 125214836 + 8.48 0.000 intron (NM_001366854, intron 1 of 8) LTR33|LTR|ERVL 28345 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr16-3993 chr16 89755226 89755436 + 8.48 0.000 intron (NM_000135, intron 30 of 42) AluSx1|SINE|Alu 33794 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr17-2901 chr17 41638122 41638332 + 8.48 0.000 intron (NR_033415, intron 2 of 10) intron (NR_033415, intron 2 of 10) 1972 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo chrX-3311 chrX 117389166 117389376 + 8.48 0.000 Intergenic Intergenic -571411 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr13-3626 chr13 30510996 30511206 + 8.48 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) -45124 NM_001363661 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr10-4746 chr10 2052457 2052667 + 8.48 0.000 Intergenic Tigger12A|DNA|TcMar-Tigger 23527 NR_106720 102465944 NR_106720 ENSG00000278069 MIR6072 hsa-mir-6072 microRNA 6072 ncRNA chr5-6086 chr5 13350662 13350872 + 8.48 0.000 Intergenic L4_C_Mam|LINE|RTE-X -317881 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr9-8548 chr9 126884450 126884660 + 8.48 0.000 3' UTR (NM_001099270, exon 2 of 2) 3' UTR (NM_001099270, exon 2 of 2) 23916 NM_001099270 403341 Hs.177633 NM_203482 ENSG00000177125 ZBTB34 ZNF918 zinc finger and BTB domain containing 34 protein-coding chr8-5430 chr8 35097197 35097407 + 8.48 0.000 Intergenic Intergenic -138173 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr13-2750 chr13 98261729 98261939 + 8.48 0.000 intron (NM_005766, intron 2 of 26) MSTB|LTR|ERVL-MaLR 53310 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr4-4153 chr4 8110119 8110329 + 8.48 0.000 intron (NM_001130084, intron 1 of 19) MamRTE1|LINE|RTE-BovB -38236 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr14-4372 chr14 26820117 26820327 + 8.48 0.000 intron (NR_110556, intron 4 of 4) intron (NR_110556, intron 4 of 4) 1898 NR_110033 101927062 NR_110033 ENSG00000257845 LINC02294 - long intergenic non-protein coding RNA 2294 ncRNA chr7-5681 chr7 66450702 66450912 + 8.48 0.000 Intergenic AluSz6|SINE|Alu -42825 NR_134573 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr11-6958 chr11 113579994 113580204 + 8.48 0.000 Intergenic Intergenic -104701 NM_000795 1813 Hs.73893 NM_000795 ENSG00000149295 DRD2 D2DR|D2R dopamine receptor D2 protein-coding chr15-3068 chr15 62261651 62261861 + 8.48 0.000 Intergenic MIR3|SINE|MIR -12961 NR_136885 255180 Hs.370479 NM_173805 GOLGA2P11 - GOLGA2 pseudogene 11 pseudo chr9-8108 chr9 99140781 99140991 + 8.48 0.000 intron (NM_004612, intron 4 of 8) intron (NM_004612, intron 4 of 8) 35773 NM_001130916 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr1-8899 chr1 6093032 6093242 + 8.48 0.000 intron (NM_001199862, intron 10 of 15) intron (NM_001199862, intron 10 of 15) 47249 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr14-4632 chr14 53829261 53829471 + 8.48 0.000 Intergenic L1PBa|LINE|L1 119118 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr10-8302 chr10 77702683 77702893 + 8.48 0.000 Intergenic MIR3|SINE|MIR -64980 NM_001271522 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr8-7108 chr8 118999559 118999769 + 8.48 0.000 intron (NM_001324095, intron 1 of 7) L2|LINE|L2 47401 NM_001324095 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding chrX-2732 chrX 125194953 125195163 + 8.48 0.000 Intergenic Intergenic -124813 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr3-10053 chr3 105475188 105475398 + 8.48 0.000 intron (NM_001243280, intron 1 of 14) intron (NM_001243280, intron 1 of 14) 108384 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr11-7844 chr11 115475568 115475778 + 8.48 0.000 intron (NM_001098517, intron 1 of 8) L1ME1|LINE|L1 28742 NM_001301045 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr14-3804 chr14 66668228 66668438 + 8.48 0.000 intron (NM_001024218, intron 1 of 21) L1PA12|LINE|L1 160926 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr9-7499 chr9 31916612 31916822 + 8.48 0.000 Intergenic Intergenic -467886 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr8-3271 chr8 17698142 17698352 + 8.48 0.000 promoter-TSS (NM_020749) promoter-TSS (NM_020749) -510 NM_020749 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr2-7113 chr2 179981123 179981333 + 8.48 0.000 intron (NM_020943, intron 5 of 19) MER58A|DNA|hAT-Charlie 26069 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr13-2369 chr13 39245761 39245971 + 8.48 0.000 Intergenic Intergenic 207410 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr8-5445 chr8 39004794 39005004 + 8.48 0.000 intron (NR_027638, intron 1 of 20) MER41B|LTR|ERV1 7913 NR_027638 8754 Hs.591852 NM_003816 ENSG00000168615 ADAM9 CORD9|MCMP|MDC9|Mltng ADAM metallopeptidase domain 9 protein-coding chr2-3721 chr2 231855485 231855695 + 8.48 0.000 Intergenic Intergenic 36708 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr20-1459 chr20 63365703 63365913 + 8.48 0.000 intron (NR_110634, intron 3 of 4) intron (NR_110634, intron 3 of 4) -4412 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr7-6074 chr7 115007857 115008067 + 8.48 0.000 intron (NM_001166345, intron 4 of 4) AluJb|SINE|Alu -70996 NR_120521 102724386 Hs.352357 NR_120521 ENSG00000225535 LINC01393 - long intergenic non-protein coding RNA 1393 ncRNA chrX-1360 chrX 147912521 147912731 + 8.48 0.000 promoter-TSS (NR_024499) promoter-TSS (NR_024499) 675 NM_002024 2332 Hs.103183 NM_002024 ENSG00000102081 FMR1 FMRP|FRAXA|POF|POF1 fragile X mental retardation 1 protein-coding chr18-1559 chr18 26865400 26865610 + 8.48 0.000 intron (NR_026908, intron 1 of 7) intron (NR_026908, intron 1 of 7) 197 NR_026908 147429 Hs.559280 NM_153010 AQP4-AS1 C18orf16|CHST9-AS1 AQP4 antisense RNA 1 ncRNA chr1-15435 chr1 153394104 153394314 + 8.48 0.000 intron (NM_001319198, intron 1 of 2) intron (NM_001319198, intron 1 of 2) -3021 NM_001319196 6279 Hs.416073 NM_002964 ENSG00000143546 S100A8 60B8AG|CAGA|CFAG|CGLA|CP-10|L1Ag|MA387|MIF|MRP8|NIF|P8 S100 calcium binding protein A8 protein-coding chr8-5330 chr8 4308258 4308468 + 8.48 0.000 intron (NM_033225, intron 3 of 69) (TG)n|Simple_repeat|Simple_repeat 686551 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr10-8607 chr10 97149201 97149411 + 8.48 0.000 intron (NM_003061, intron 4 of 36) intron (NM_003061, intron 4 of 36) 36653 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr16-2286 chr16 4777452 4777662 + 8.48 0.000 TTS (NM_001154458) TTS (NM_001154458) -10395 NM_001303450 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr20-2005 chr20 51631188 51631398 + 8.48 0.000 intron (NM_006045, intron 15 of 27) intron (NM_006045, intron 15 of 27) -68454 NM_001136021 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr7-8668 chr7 72216584 72216794 + 8.48 0.000 intron (NM_001363460, intron 2 of 5) intron (NM_001363460, intron 2 of 5) 120702 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr7-9076 chr7 104815753 104815963 + 8.48 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) -11766 NR_034141 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr2-11305 chr2 191471549 191471759 + 8.48 0.000 Intergenic Intergenic -206418 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr5-2689 chr5 66242231 66242441 + 8.48 0.000 Intergenic Intergenic -32890 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA chr11-3643 chr11 86551471 86551681 + 8.48 0.000 intron (NM_001014811, intron 3 of 13) intron (NM_001014811, intron 3 of 13) 120622 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr3-4077 chr3 99859847 99860057 + 8.48 0.000 intron (NM_001042459, intron 4 of 4) intron (NM_001042459, intron 4 of 4) 16221 NM_001370247 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr2-5191 chr2 37417535 37417745 + 8.48 0.000 Intergenic Intergenic 73010 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr4-4374 chr4 40377831 40378041 + 8.48 0.000 Intergenic (ACAG)n|Simple_repeat|Simple_repeat 42603 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chr11-9903 chr11 74967754 74967964 + 8.48 0.000 intron (NM_014752, intron 3 of 4) AluJb|SINE|Alu 18593 NM_014752 9789 Hs.282700 NM_014752 ENSG00000118363 SPCS2 - signal peptidase complex subunit 2 protein-coding chr6-5044 chr6 112296195 112296405 + 8.48 0.000 intron (NR_121193, intron 2 of 2) L2a|LINE|L2 -41585 NM_001105208 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr7-6120 chr7 121964677 121964887 + 8.48 0.000 intron (NM_001206839, intron 2 of 28) L2a|LINE|L2 91621 NM_001369396 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr2-12429 chr2 57477768 57477978 + 8.48 0.000 Intergenic AluSz6|SINE|Alu -429778 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chrX-3620 chrX 86529084 86529294 + 8.48 0.000 intron (NM_001139515, intron 3 of 11) AluJr4|SINE|Alu 266221 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr15-4780 chr15 71034572 71034782 + 8.48 0.000 intron (NM_017691, intron 14 of 15) L1PA10|LINE|L1 -106772 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr10-5061 chr10 43095786 43095996 + 8.48 0.000 intron (NM_020630, intron 1 of 18) intron (NM_020630, intron 1 of 18) -8841 NM_001355216 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr2-12771 chr2 85636652 85636862 + 8.48 0.000 intron (NR_046347, intron 7 of 12) AluSx1|SINE|Alu 20571 NM_001256725 10713 Hs.654745 NM_006590 ENSG00000168883 USP39 65K|CGI-21|HSPC332|SAD1|SNRNP65 ubiquitin specific peptidase 39 protein-coding chr2-3873 chr2 38607891 38608101 + 8.48 0.000 Intergenic Intergenic -4960 NM_001142650 92906 Hs.445497 NM_138394 ENSG00000143889 HNRNPLL HNRPLL|SRRF heterogeneous nuclear ribonucleoprotein L like protein-coding chr2-2599 chr2 3182825 3183035 + 8.48 0.000 Intergenic (CCCA)n|Simple_repeat|Simple_repeat -56904 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr3-9555 chr3 53505853 53506063 + 8.48 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 11347 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr1-7715 chr1 26481140 26481350 + 8.48 0.000 Intergenic AluSx|SINE|Alu 8805 NM_005517 3151 Hs.181163 NM_005517 ENSG00000198830 HMGN2 HMG17 high mobility group nucleosomal binding domain 2 protein-coding chr6-4438 chr6 34021314 34021524 + 8.48 0.000 3' UTR (NM_001256812, exon 10 of 10) 3' UTR (NM_001256812, exon 10 of 10) -21368 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr2-8633 chr2 145007793 145008003 + 8.48 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 339931 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr3-5672 chr3 12923992 12924202 + 8.48 0.000 intron (NM_001330619, intron 4 of 12) intron (NM_001330619, intron 4 of 12) -38886 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr17-5931 chr17 75469007 75469217 + 8.48 0.000 intron (NM_014738, intron 1 of 31) intron (NM_014738, intron 1 of 31) -7425 NM_001321148 9772 Hs.514474 NM_014738 ENSG00000177728 TMEM94 IDDCDF|KIAA0195 transmembrane protein 94 protein-coding chr14-3058 chr14 61089902 61090112 + 8.48 0.000 Intergenic L1MCc|LINE|L1 -108317 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr17-8318 chr17 72209484 72209694 + 8.48 0.000 Intergenic Intergenic 88569 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box transcription factor 9 protein-coding chr11-3925 chr11 125315692 125315902 + 8.48 0.000 intron (NM_022062, intron 2 of 12) intron (NM_022062, intron 2 of 12) 151046 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr20-1892 chr20 51467830 51468040 + 8.48 0.000 intron (NM_012340, intron 5 of 10) L1ME2|LINE|L1 -14958 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr9-3039 chr9 129996156 129996366 + 8.48 0.000 intron (NM_001363755, intron 1 of 15) intron (NM_001363755, intron 1 of 15) 46928 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr3-7607 chr3 15320292 15320502 + 8.48 0.000 intron (NM_001018009, intron 2 of 8) intron (NM_001018009, intron 2 of 8) 12189 NM_004844 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr7-3775 chr7 83543549 83543759 + 8.48 0.000 intron (NM_012431, intron 1 of 16) intron (NM_012431, intron 1 of 16) 97777 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr14-3860 chr14 81269497 81269707 + 8.48 0.000 intron (NM_001366850, intron 7 of 7) intron (NM_001366850, intron 7 of 7) -48212 NM_201595 2957 Hs.592334 NM_015859 ENSG00000165417 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA subunit 1 protein-coding chr7-8839 chr7 86963795 86964005 + 8.48 0.000 intron (NM_001291990, intron 2 of 21) intron (NM_001291990, intron 2 of 21) 1999 NM_152748 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr16-4137 chr16 4177249 4177459 + 8.48 0.000 Intergenic Intergenic -60912 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr16-4138 chr16 4189817 4190027 + 8.48 0.000 3' UTR (NM_001323668, exon 7 of 7) 3' UTR (NM_001323668, exon 7 of 7) 52158 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr7-9616 chr7 149669249 149669459 + 8.48 0.000 Intergenic L1MEg|LINE|L1 -44564 NR_027789 79970 Hs.520785 NM_024910 ENSG00000133624 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo chr12-4653 chr12 45974022 45974232 + 8.48 0.000 intron (NM_004719, intron 1 of 14) Tigger1|DNA|TcMar-Tigger 16447 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr2-7901 chr2 55802532 55802742 + 8.48 0.000 Intergenic Intergenic -108793 NM_033109 87178 Hs.388733 NM_033109 ENSG00000138035 PNPT1 COXPD13|DFNB70|OLD35|PNPASE|old-35 polyribonucleotide nucleotidyltransferase 1 protein-coding chr3-6447 chr3 105092873 105093083 + 8.48 0.000 Intergenic L1PA12|LINE|L1 -273735 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr7-3320 chr7 66576341 66576551 + 8.48 0.000 intron (NR_111975, intron 1 of 3) MIRb|SINE|MIR 15961 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr20-843 chr20 35980467 35980677 + 8.48 0.000 exon (NM_001207076, exon 4 of 11) exon (NM_001207076, exon 4 of 11) 11982 NM_080834 140894 Hs.732697 NM_080834 ENSG00000149646 CNBD2 C20orf152|CNMPD1 cyclic nucleotide binding domain containing 2 protein-coding chr8-4109 chr8 70333588 70333798 + 8.48 0.000 intron (NM_001321703, intron 1 of 22) intron (NM_001321703, intron 1 of 22) 69697 NM_001321712 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr3-2769 chr3 157533698 157533908 + 8.48 0.000 Intergenic L2b|LINE|L2 -9509 NR_024016 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr17-5506 chr17 42094158 42094368 + 8.48 0.000 Intergenic AluSq2|SINE|Alu 18451 NM_024119 79132 Hs.55918 NM_024119 ENSG00000108771 DHX58 D11LGP2|D11lgp2e|LGP2|RLR-3 DExH-box helicase 58 protein-coding chr10-2191 chr10 24953240 24953450 + 8.48 0.000 promoter-TSS (NM_001282786) promoter-TSS (NM_001282786) -739 NM_020200 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr19-6982 chr19 48612564 48612774 + 8.48 0.000 intron (NM_017708, intron 1 of 4) AluSg|SINE|Alu 768 NM_017708 54854 Hs.165803 NM_017708 ENSG00000105523 FAM83E - family with sequence similarity 83 member E protein-coding chr3-6107 chr3 53092259 53092469 + 8.48 0.000 intron (NM_052859, intron 12 of 12) intron (NM_052859, intron 12 of 12) 38071 NM_052859 91869 Hs.631910 NM_052859 ENSG00000163933 RFT1 CDG1N RFT1 homolog protein-coding chr2-8539 chr2 132559794 132560004 + 8.48 0.000 intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 110306 NM_001321235 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr6-2614 chr6 129767450 129767660 + 8.48 0.000 Intergenic Intergenic -57378 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr2-14219 chr2 209730126 209730336 + 8.48 0.000 exon (NM_031847, exon 13 of 13) exon (NM_031847, exon 13 of 13) -41601 NM_182587 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr12-4259 chr12 115641072 115641282 + 8.48 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 507477 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr4-3047 chr4 139576708 139576918 + 8.48 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -20044 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr16-3807 chr16 49944414 49944624 + 8.48 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -80687 NR_104042 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding chr8-6456 chr8 61496043 61496253 + 8.48 0.000 intron (NM_173519, intron 5 of 5) L3|LINE|CR1 193663 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr4-3562 chr4 509070 509280 + 8.48 0.000 intron (NM_001345994, intron 5 of 13) intron (NM_001345994, intron 5 of 13) 9965 NM_001345989 54872 Hs.7099 NM_017733 ENSG00000174227 PIGG GPI7|LAS21|MRT53|PRO4405|RLGS1930 phosphatidylinositol glycan anchor biosynthesis class G protein-coding chr12-3628 chr12 84718944 84719154 + 8.48 0.000 Intergenic Intergenic 193750 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr2-6708 chr2 26631996 26632206 + 8.48 0.000 intron (NM_001029881, intron 2 of 6) MIRb|SINE|MIR 9265 NM_001029881 130106 Hs.591579 NM_001029881 ENSG00000157884 CIB4 KIP4 calcium and integrin binding family member 4 protein-coding chr9-3678 chr9 98959500 98959710 + 8.48 0.000 intron (NM_001855, intron 2 of 41) AluJb|SINE|Alu 15698 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr14-1752 chr14 73248606 73248816 + 8.48 0.000 intron (NM_001365907, intron 4 of 25) AluJb|SINE|Alu -2710 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr22-2800 chr22 42718888 42719098 + 8.48 0.000 intron (NR_146459, intron 1 of 1) intron (NR_146459, intron 1 of 1) 1877 NR_146459 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr9-7071 chr9 126604231 126604441 + 8.48 0.000 Intergenic Intergenic -10107 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr8-2753 chr8 109643954 109644164 + 8.48 0.000 promoter-TSS (NM_001099756) promoter-TSS (NM_001099756) -70 NR_161375 100132813 Hs.390738 NR_161375 LOC100132813 - uncharacterized LOC100132813 ncRNA chr4-8198 chr4 134301380 134301590 + 8.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -99696 NM_001114734 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr19-4934 chr19 44183164 44183374 + 8.48 0.000 Intergenic ERVL-E-int|LTR|ERVL 18105 NM_001032372 7769 Hs.145956 NM_015919 ENSG00000167380 ZNF226 - zinc finger protein 226 protein-coding chr10-4002 chr10 112869 113079 + 8.48 0.000 Intergenic Intergenic -17114 NM_001370103 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr16-4410 chr16 50819283 50819493 + 8.48 0.000 Intergenic MLT2B1|LTR|ERVL 12716 NR_146573 105371252 NR_146573 ENSG00000261703 LINC02168 - long intergenic non-protein coding RNA 2168 ncRNA chr12-8050 chr12 115497277 115497487 + 8.48 0.000 Intergenic Intergenic 651272 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr12-3460 chr12 117097476 117097686 + 8.48 0.000 intron (NR_031766, intron 1 of 7) intron (NR_031766, intron 1 of 7) 1835 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr6-1714 chr6 33668187 33668397 + 8.48 0.000 intron (NM_002224, intron 16 of 57) intron (NM_002224, intron 16 of 57) -29836 NR_037498 100500873 NR_037498 ENSG00000266509 MIR3934 - microRNA 3934 ncRNA chr9-2364 chr9 112563006 112563216 + 8.48 0.000 intron (NM_133465, intron 1 of 3) AluJb|SINE|Alu -75467 NM_001350649 100133204 Hs.662552 NM_001350649 C9orf147 - chromosome 9 open reading frame 147 protein-coding chr3-5787 chr3 25510481 25510691 + 8.48 0.000 intron (NR_110892, intron 3 of 6) AluSz|SINE|Alu 52276 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr2-8555 chr2 134039987 134040197 + 8.48 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -79843 NM_001371457 chr19-6762 chr19 40131507 40131717 + 8.48 0.000 Intergenic L1M4|LINE|L1 -40669 NM_001142579 284323 Hs.115140 NM_001010880 ENSG00000197782 ZNF780A ZNF780 zinc finger protein 780A protein-coding chr17-7843 chr17 41727592 41727802 + 8.48 0.000 intron (NM_001367460, intron 7 of 11) intron (NM_001367460, intron 7 of 11) 6946 NM_001367460 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding chr2-3971 chr2 71843430 71843640 + 8.48 0.000 Intergenic Intergenic 304327 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr17-5238 chr17 17561530 17561740 + 8.48 0.000 intron (NM_148173, intron 2 of 6) MIRb|SINE|MIR 15861 NM_148173 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr17-5147 chr17 8221483 8221693 + 8.48 0.000 intron (NR_026951, intron 2 of 2) CpG 2455 NR_026951 284029 Hs.121692 NM_173621 ENSG00000178977 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA chr5-5773 chr5 173714844 173715054 + 8.48 0.000 intron (NR_108027, intron 1 of 2) L2|LINE|L2 25490 NR_146727 105377736 Hs.582570 NR_146727 ENSG00000253428 LINC01942 - long intergenic non-protein coding RNA 1942 ncRNA chrX-2049 chrX 18168420 18168630 + 8.48 0.000 intron (NM_153346, intron 13 of 13) L3|LINE|CR1 52361 NM_153346 139105 Hs.403802 NM_153346 ENSG00000177324 BEND2 CXorf20 BEN domain containing 2 protein-coding chr6-7046 chr6 26204767 26204977 + 8.48 0.000 exon (NM_003545, exon 1 of 1) exon (NM_003545, exon 1 of 1) 227 NM_003545 8367 Hs.662174 NM_003545 ENSG00000276966 HIST1H4E H4/j|H4FJ histone cluster 1 H4 family member e protein-coding chr10-5482 chr10 80128008 80128218 + 8.48 0.000 Intergenic AluSz|SINE|Alu -3548 NR_138551 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr11-7365 chr11 69367793 69368003 + 8.48 0.000 Intergenic Intergenic -57757 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr18-1085 chr18 47743225 47743435 + 8.48 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 187329 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr17-5417 chr17 34773105 34773315 + 8.48 0.000 Intergenic Intergenic 188250 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr3-3315 chr3 179346845 179347055 + 8.48 0.000 promoter-TSS (NM_033540) promoter-TSS (NM_033540) -759 NM_033540 55669 Hs.478383 NM_017927 ENSG00000171109 MFN1 hfzo1|hfzo2 mitofusin 1 protein-coding chr12-3260 chr12 65243269 65243479 + 8.48 0.000 intron (NM_014319, intron 9 of 12) intron (NM_014319, intron 9 of 12) -35309 NM_001193460 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr2-13357 chr2 136047063 136047273 + 8.48 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -61484 NM_001293312 1615 Hs.503787 NM_001349 ENSG00000115866 DARS HBSL|aspRS aspartyl-tRNA synthetase protein-coding chr6-1678 chr6 7528494 7528704 + 8.48 0.000 Intergenic Intergenic -13072 NM_004415 1832 Hs.519873 NM_004415 ENSG00000096696 DSP DCWHKTA|DP desmoplakin protein-coding chr4-5946 chr4 156046755 156046965 + 8.48 0.000 Intergenic LTR16A1|LTR|ERVL -92994 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr9-3025 chr9 125165644 125165854 + 8.48 0.000 intron (NM_002721, intron 2 of 6) Charlie1a|DNA|hAT-Charlie -22221 NM_173690 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr2-11388 chr2 216265231 216265441 + 8.48 0.000 intron (NM_020814, intron 3 of 3) intron (NM_020814, intron 3 of 3) 48447 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA chr4-3727 chr4 74623227 74623437 + 8.48 0.000 Intergenic L2a|LINE|L2 171191 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr3-5744 chr3 20200329 20200539 + 8.48 0.000 Intergenic L2b|LINE|L2 -14201 NR_131180 151648 Hs.105153 NM_138484 ENSG00000129810 SGO1 CAID|NY-BR-85|SGO|SGOL1 shugoshin 1 protein-coding chr20-2210 chr20 58792405 58792615 + 8.48 0.000 Intergenic Intergenic 19085 NR_134566 105372695 Hs.128204 NR_134566 LOC105372695 - uncharacterized LOC105372695 ncRNA chr8-3766 chr8 23854032 23854242 + 8.48 0.000 intron (NM_003155, intron 1 of 3) intron (NM_003155, intron 1 of 3) 669 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr11-4849 chr11 22829977 22830187 + 8.48 0.000 promoter-TSS (NR_135213) promoter-TSS (NR_135213) -281 NM_148893 258010 Hs.349096 NM_148893 ENSG00000198168 SVIP - small VCP interacting protein protein-coding chr1-8664 chr1 207707340 207707550 + 8.48 0.000 intron (NM_175710, intron 9 of 11) AluSx|SINE|Alu -44593 NM_002389 4179 Hs.510402 NM_002389 ENSG00000117335 CD46 AHUS2|MCP|MIC10|TLX|TRA2.10 CD46 molecule protein-coding chr8-2385 chr8 48430401 48430611 + 8.48 0.000 Intergenic Intergenic -121061 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr4-3010 chr4 125657248 125657458 + 8.48 0.000 Intergenic MER67A|LTR|ERV1 150094 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr8-6425 chr8 58666401 58666611 + 8.48 0.000 Intergenic Intergenic -6653 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr3-2871 chr3 45818184 45818394 + 8.48 0.000 Intergenic Intergenic -21753 NM_022405 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr19-3278 chr19 3254748 3254958 + 8.48 0.000 intron (NR_033342, intron 2 of 12) (TCCA)n|Simple_repeat|Simple_repeat 29575 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chrX-5384 chrX 151097446 151097656 + 8.48 0.000 Intergenic L1M5|LINE|L1 -70671 NR_036256 100422930 NR_036256 ENSG00000265789 MIR4330 - microRNA 4330 ncRNA chr4-8289 chr4 142814944 142815154 + 8.48 0.000 intron (NM_001331040, intron 1 of 25) L1MC3|LINE|L1 31486 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr10-5137 chr10 51476796 51477006 + 8.48 0.000 intron (NM_001098512, intron 3 of 17) MIRb|SINE|MIR 177328 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr15-5175 chr15 93001900 93002110 + 8.48 0.000 intron (NM_001271, intron 32 of 38) MIRb|SINE|MIR 71151 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr8-4800 chr8 3762452 3762662 + 8.48 0.000 intron (NM_033225, intron 5 of 69) LTR18B|LTR|ERVL -1034106 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr17-3411 chr17 6576322 6576532 + 8.48 0.000 Intergenic Intergenic -19872 NM_031220 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr10-6225 chr10 58651336 58651546 + 8.48 0.000 intron (NM_001080512, intron 2 of 20) L4_A_Mam|LINE|RTE-X -63574 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr2-13630 chr2 159800363 159800573 + 8.48 0.000 intron (NM_001198760, intron 33 of 37) MIR3|SINE|MIR -2213 NM_001198763 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr3-6061 chr3 50733235 50733445 + 8.48 0.000 intron (NM_004947, intron 1 of 52) L1M4c|LINE|L1 58260 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr6-7786 chr6 97573250 97573460 + 8.48 0.000 intron (NR_110757, intron 1 of 4) L1PA8|LINE|L1 267769 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr13-2102 chr13 82567816 82568026 + 8.48 0.000 Intergenic MER61-int|LTR|ERV1 1314472 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr22-1863 chr22 39667553 39667763 + 8.48 0.000 intron (NM_001003406, intron 22 of 35) intron (NM_001003406, intron 22 of 35) 96905 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chrX-2766 chrX 130327788 130327998 + 8.48 0.000 Intergenic AluSz|SINE|Alu -11995 NM_001282197 9016 Hs.194686 NM_003951 ENSG00000102078 SLC25A14 BMCP1|UCP5 solute carrier family 25 member 14 protein-coding chr4-6983 chr4 21768557 21768767 + 8.48 0.000 intron (NM_147182, intron 1 of 8) intron (NM_147182, intron 1 of 8) -70967 NM_001035003 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr12-6388 chr12 69865335 69865545 + 8.48 0.000 intron (NM_182530, intron 2 of 24) MER39|LTR|ERV1 40213 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr11-7555 chr11 18176518 18176728 + 8.48 0.000 Intergenic Intergenic 3786 NM_054032 117196 Hs.632138 NM_054032 ENSG00000179817 MRGPRX4 GPCR|MRGX4|SNSR6 MAS related GPR family member X4 protein-coding chr3-8384 chr3 96135210 96135420 + 8.48 0.000 Intergenic Intergenic -224649 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chr6-2519 chr6 158701315 158701525 + 8.48 0.000 intron (NM_001242394, intron 6 of 17) intron (NM_001242394, intron 6 of 17) 38017 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr1-7212 chr1 220449133 220449343 + 8.48 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -78898 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr12-4913 chr12 67276741 67276951 + 8.48 0.000 intron (NM_001329674, intron 2 of 15) intron (NM_001329674, intron 2 of 15) 7488 NM_001329675 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr6-2027 chr6 50682571 50682781 + 8.48 0.000 Intergenic AluJr|SINE|Alu -30868 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr11-5766 chr11 3849320 3849530 + 8.48 0.000 Intergenic Intergenic -6239 NM_001277962 6786 Hs.501735 NM_003156 ENSG00000167323 STIM1 D11S4896E|GOK|IMD10|STRMK|TAM|TAM1 stromal interaction molecule 1 protein-coding chr7-4074 chr7 14098216 14098426 + 8.48 0.000 Intergenic L2|LINE|L2 -106896 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr11-8443 chr11 112426557 112426767 + 8.48 0.000 Intergenic L1PA8|LINE|L1 -55570 NR_120559 101928823 Hs.126118 NR_120559 ENSG00000254968 LINC02763 - long intergenic non-protein coding RNA 2763 ncRNA chr4-4699 chr4 87313814 87314024 + 8.48 0.000 exon (NM_001136230, exon 4 of 6) exon (NM_001136230, exon 4 of 6) 8963 NM_178135 345275 Hs.284414 NM_178135 ENSG00000170509 HSD17B13 HMFN0376|NIIL497|SCDR9|SDR16C3 hydroxysteroid 17-beta dehydrogenase 13 protein-coding chr8-4408 chr8 106754839 106755049 + 8.48 0.000 Intergenic L1PA14|LINE|L1 15300 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr12-2793 chr12 82799352 82799562 + 8.48 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 112302 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr5-5658 chr5 158634715 158634925 + 8.48 0.000 Intergenic Intergenic -225047 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr6-7166 chr6 37485446 37485656 + 8.48 0.000 intron (NM_138493, intron 1 of 3) intron (NM_138493, intron 1 of 3) 14342 NM_138493 154467 Hs.284207 NM_138493 ENSG00000198937 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding chr5-4705 chr5 40655821 40656031 + 8.48 0.000 Intergenic L1M2|LINE|L1 -23989 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr4-1952 chr4 124642112 124642322 + 8.48 0.000 Intergenic Intergenic 70515 NM_001167882 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr4-4920 chr4 123640290 123640500 + 8.48 0.000 Intergenic Intergenic -9596 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr10-5554 chr10 88080382 88080592 + 8.48 0.000 Intergenic Intergenic 216862 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr2-8584 chr2 137862863 137863073 + 8.48 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 64964 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr9-5573 chr9 112446629 112446839 + 8.48 0.000 intron (NR_036651, intron 7 of 9) L1M6|LINE|L1 -40093 NM_001287038 158405 Hs.656619 NM_133465 ENSG00000165185 KIAA1958 - KIAA1958 protein-coding chr17-7248 chr17 2189480 2189690 + 8.48 0.000 intron (NM_001256827, intron 3 of 11) intron (NM_001256827, intron 3 of 11) -43093 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr7-4813 chr7 96989022 96989232 + 8.48 0.000 intron (NR_015448, intron 1 of 2) intron (NR_015448, intron 1 of 2) -16426 NM_005222 1750 Hs.249196 NM_005222 ENSG00000006377 DLX6 - distal-less homeobox 6 protein-coding chr2-5839 chr2 236637807 236638017 + 8.48 0.000 Intergenic Intergenic 68087 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr4-4936 chr4 125186786 125186996 + 8.48 0.000 Intergenic L1MA5|LINE|L1 -129521 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr12-8085 chr12 117531382 117531592 + 8.48 0.000 intron (NM_173598, intron 11 of 19) intron (NM_173598, intron 11 of 19) -169685 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr1-7549 chr1 196653999 196654209 + 8.48 0.000 intron (NM_001014975, intron 1 of 9) intron (NM_001014975, intron 1 of 9) 2226 NM_000186 3075 Hs.363396 NM_000186 ENSG00000000971 CFH AHUS1|AMBP1|ARMD4|ARMS1|CFHL3|FH|FHL1|HF|HF1|HF2|HUS complement factor H protein-coding chr3-6066 chr3 51559646 51559856 + 8.48 0.000 intron (NM_001322253, intron 3 of 23) intron (NM_001322253, intron 3 of 23) 18162 NM_001322257 23132 Hs.105399 NM_015106 ENSG00000164080 RAD54L2 ARIP4|HSPC325|SRISNF2L RAD54 like 2 protein-coding chr16-4685 chr16 79731053 79731263 + 8.48 0.000 intron (NR_104663, intron 5 of 5) intron (NR_104663, intron 5 of 5) -39313 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr9-3846 chr9 130796174 130796384 + 8.48 0.000 intron (NM_007313, intron 1 of 10) AluSz6|SINE|Alu -38975 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr18-1731 chr18 5475456 5475666 + 8.48 0.000 intron (NM_001281535, intron 5 of 21) L3|LINE|CR1 64995 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr8-3830 chr8 29852010 29852220 + 8.48 0.000 Intergenic Intergenic -23611 NR_125817 101929470 Hs.204721 NR_125817 ENSG00000248964 LOC101929470 - uncharacterized LOC101929470 ncRNA chr1-14882 chr1 81414433 81414643 + 8.48 0.000 intron (NM_001366004, intron 2 of 27) AmnSINE1|SINE|5S-Deu-L2 108143 NM_001366008 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr7-5496 chr7 43372922 43373132 + 8.48 0.000 intron (NM_001287059, intron 5 of 27) intron (NM_001287059, intron 5 of 27) 149515 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr6-5655 chr6 87062512 87062722 + 8.48 0.000 Intergenic AluJb|SINE|Alu 32489 NM_000735 1081 Hs.119689 NM_000735 ENSG00000135346 CGA CG-ALPHA|FSHA|GPA1|GPHA1|GPHa|HCG|LHA|TSHA glycoprotein hormones, alpha polypeptide protein-coding chrX-2026 chrX 16321042 16321252 + 8.48 0.000 Intergenic L2c|LINE|L2 153666 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - MAGE family member B17 protein-coding chr9-2692 chr9 78811656 78811866 + 8.48 0.000 Intergenic Intergenic 333905 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr14-4800 chr14 66359383 66359593 + 8.48 0.000 Intergenic Intergenic -126883 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr20-2974 chr20 36276711 36276921 + 8.48 0.000 Intergenic Intergenic -29523 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr13-3687 chr13 35906635 35906845 + 8.48 0.000 intron (NM_001330071, intron 4 of 16) intron (NM_001330071, intron 4 of 16) -50879 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr6-7321 chr6 45580082 45580292 + 8.48 0.000 Intergenic AluJr|SINE|Alu 157912 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr21-1215 chr21 45055993 45056203 + 8.48 0.000 Intergenic Intergenic 17113 NR_027292 728039 Hs.309203 NM_032653 ENSG00000235374 SSR4P1 C21orf122|PRED57|PRED90 signal sequence receptor subunit 4 pseudogene 1 pseudo chr4-5318 chr4 181324169 181324379 + 8.48 0.000 Intergenic Intergenic -59245 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr4-5810 chr4 91256303 91256513 + 8.48 0.000 intron (NM_001145065, intron 10 of 10) MER11B|LTR|ERVK 1020894 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr13-2124 chr13 93398217 93398427 + 8.48 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 171515 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr15-2462 chr15 82679966 82680176 + 8.48 0.000 intron (NM_001278512, intron 9 of 26) intron (NM_001278512, intron 9 of 26) -17396 NM_001348441 8120 Hs.199593 NM_004644 ENSG00000103723 AP3B2 EIEE48|NAPTB adaptor related protein complex 3 subunit beta 2 protein-coding chr11-7999 chr11 12644122 12644332 + 8.48 0.000 Intergenic AluSz|SINE|Alu -30194 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr1-15938 chr1 187783181 187783391 + 8.48 0.000 Intergenic L2a|LINE|L2 339658 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr20-2715 chr20 48449199 48449409 + 8.48 0.000 Intergenic Intergenic 89393 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr11-6727 chr11 81358804 81359014 + 8.48 0.000 Intergenic Intergenic 531927 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr5-2559 chr5 180088126 180088336 + 8.48 0.000 Intergenic MER21B|LTR|ERVL -16472 NM_018434 55819 Hs.484363 NM_018434 ENSG00000113269 RNF130 G1RZFP|GOLIATH|GP ring finger protein 130 protein-coding chr6-3112 chr6 98769471 98769681 + 8.48 0.000 Intergenic Intergenic 62124 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr2-7469 chr2 15047185 15047395 + 8.48 0.000 Intergenic Intergenic 414573 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr15-1690 chr15 61518091 61518301 + 8.48 0.000 Intergenic Intergenic -211722 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr9-4027 chr9 84045141 84045351 + 8.48 0.000 Intergenic L1M2|LINE|L1 -18197 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr2-13306 chr2 129993521 129993731 + 8.48 0.000 Intergenic Intergenic -13154 NR_036537 100131320 Hs.535586 NR_036537 ENSG00000225449 RAB6C-AS1 - RAB6C antisense RNA 1 ncRNA chr12-2341 chr12 4379465 4379675 + 8.48 0.000 exon (NM_020638, exon 1 of 3) exon (NM_020638, exon 1 of 3) 142 NM_020638 8074 Hs.287370 NM_020638 ENSG00000118972 FGF23 ADHR|FGFN|HFTC2|HPDR2|HYPF|PHPTC fibroblast growth factor 23 protein-coding chr3-3435 chr3 127024442 127024652 + 8.48 0.000 intron (NM_032242, intron 22 of 30) intron (NM_032242, intron 22 of 30) 35953 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr7-3440 chr7 493794 494004 + 8.48 0.000 Intergenic CpG 25945 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr7-5404 chr7 34074488 34074698 + 8.48 0.000 intron (NM_133468, intron 12 of 15) intron (NM_133468, intron 12 of 15) 169054 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr21-1122 chr21 36902875 36903085 + 8.48 0.000 intron (NM_001352515, intron 5 of 10) intron (NM_001352515, intron 5 of 10) 59378 NM_001352518 3141 Hs.371350 NM_000411 ENSG00000159267 HLCS HCS holocarboxylase synthetase protein-coding chr5-6808 chr5 99725582 99725792 + 8.48 0.000 Intergenic L1M3|LINE|L1 191697 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr2-9226 chr2 218167661 218167871 + 8.48 0.000 promoter-TSS (NM_000634) promoter-TSS (NM_000634) -804 NM_000634 3577 Hs.194778 NM_000634 ENSG00000163464 CXCR1 C-C|C-C-CKR-1|CD128|CD181|CDw128a|CKR-1|CMKAR1|IL8R1|IL8RA|IL8RBA C-X-C motif chemokine receptor 1 protein-coding chr5-2471 chr5 139373678 139373888 + 8.48 0.000 intron (NM_005847, intron 13 of 14) intron (NM_005847, intron 13 of 14) 9514 NM_005847 9963 Hs.643467 NM_005847 ENSG00000170482 SLC23A1 SLC23A2|SVCT1|YSPL3 solute carrier family 23 member 1 protein-coding chr1-14864 chr1 79551085 79551295 + 8.48 0.000 Intergenic ERVL-B4-int|LTR|ERVL -544460 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr5-8370 chr5 122271232 122271442 + 8.48 0.000 Intergenic L1PB1|LINE|L1 -40354 NR_131762 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr6-6930 chr6 15194021 15194231 + 8.48 0.000 Intergenic Intergenic -51943 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr12-3653 chr12 110064029 110064239 + 8.48 0.000 intron (NR_148514, intron 1 of 3) Zaphod|DNA|hAT-Tip100 3561 NM_207435 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr14-3659 chr14 84457074 84457284 + 8.48 0.000 Intergenic Intergenic -814753 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr8-2719 chr8 100434935 100435145 + 8.48 0.000 Intergenic MER5A|DNA|hAT-Charlie 52277 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr2-8753 chr2 162092940 162093150 + 8.48 0.000 Intergenic Intergenic 18188 NR_147697 100131604 NR_147697 LOC100131604 - uncharacterized LOC100131604 ncRNA chr3-7968 chr3 171811567 171811777 + 8.48 0.000 Intergenic Intergenic -1189 NM_001130081 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr1-8387 chr1 75339586 75339796 + 8.48 0.000 intron (NM_001320283, intron 1 of 21) intron (NM_001320283, intron 1 of 21) 205303 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr21-948 chr21 42824309 42824519 + 8.48 0.000 Intergenic L1M1|LINE|L1 -44420 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr16-4563 chr16 66813097 66813307 + 8.48 0.000 intron (NM_001018159, intron 14 of 20) AluJo|SINE|Alu -11582 NM_001136505 283847 Hs.376505 NM_173616 ENSG00000249961 TERB1 CCDC79 telomere repeat binding bouquet formation protein 1 protein-coding chr12-4482 chr12 18595586 18595796 + 8.48 0.000 intron (NM_001288774, intron 30 of 32) MER45A|DNA|hAT-Tip100 141818 NM_001330769 89869 Hs.97542 NM_033123 ENSG00000139151 PLCZ1 NYD-SP27|PLC-zeta-1|PLCzeta|SPGF17 phospholipase C zeta 1 protein-coding chr8-3706 chr8 19224420 19224630 + 8.48 0.000 intron (NR_038919, intron 3 of 4) MIR3|SINE|MIR 20997 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr11-8859 chr11 13385003 13385213 + 8.48 0.000 intron (NR_147789, intron 19 of 20) intron (NR_147789, intron 19 of 20) 55171 NM_001297742 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr5-4777 chr5 55510455 55510665 + 8.48 0.000 intron (NR_103485, intron 1 of 6) intron (NR_103485, intron 1 of 6) -1634 NR_049869 100847019 NR_049869 ENSG00000265135 MIR5687 - microRNA 5687 ncRNA chr11-6068 chr11 32553280 32553490 + 8.48 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -30446 NM_001307929 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chrX-4866 chrX 105091394 105091604 + 8.48 0.000 intron (NM_017416, intron 2 of 10) MER81|DNA|hAT-Blackjack 129194 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr16-5326 chr16 78006788 78006998 + 8.48 0.000 Intergenic AluJr4|SINE|Alu -15655 NM_005752 10143 Hs.177936 NM_005752 ENSG00000166509 CLEC3A CLECSF1 C-type lectin domain family 3 member A protein-coding chr8-3712 chr8 20017127 20017337 + 8.48 0.000 Intergenic AluJo|SINE|Alu 77979 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr3-3786 chr3 13498971 13499181 + 8.48 0.000 intron (NM_001136041, intron 5 of 9) intron (NM_001136041, intron 5 of 9) 18770 NM_001136041 79885 Hs.744132 NM_024827 ENSG00000163517 HDAC11 HD11 histone deacetylase 11 protein-coding chr7-6110 chr7 121002042 121002252 + 8.48 0.000 intron (NM_001105533, intron 1 of 17) intron (NM_001105533, intron 1 of 17) 12756 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr9-5323 chr9 87382888 87383098 + 8.48 0.000 Intergenic MER44B|DNA|TcMar-Tigger -114235 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr2-9243 chr2 219000103 219000313 + 8.48 0.000 Intergenic Intergenic 1500 NR_029867 494324 NR_029867 ENSG00000198973 MIR375 MIRN375|hsa-mir-375|miRNA375|mir-375 microRNA 375 ncRNA chr19-4578 chr19 11306309 11306519 + 8.48 0.000 intron (NM_001282509, intron 4 of 6) L2a|LINE|L2 10254 NM_001282510 26526 Hs.579784 NM_012466 ENSG00000130167 TSPAN16 TM-8|TM4-B|TM4SF16 tetraspanin 16 protein-coding chr8-2556 chr8 32583906 32584116 + 8.48 0.000 intron (NM_013960, intron 1 of 12) intron (NM_013960, intron 1 of 12) -11815 NM_001159995 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr8-4090 chr8 68411772 68411982 + 8.48 0.000 intron (NR_146187, intron 1 of 13) MLT1A0|LTR|ERVL-MaLR -80386 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr22-2960 chr22 49997120 49997330 + 8.48 0.000 intron (NM_001371416, intron 13 of 14) intron (NM_001371416, intron 13 of 14) 15540 NM_001001694 400935 Hs.526712 NM_001001694 ENSG00000188263 IL17REL - interleukin 17 receptor E like protein-coding chr11-6703 chr11 78422801 78423011 + 8.48 0.000 Intergenic L1PA10|LINE|L1 -5086 NM_080491 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr14-4650 chr14 54756674 54756884 + 8.48 0.000 intron (NM_001161577, intron 1 of 8) intron (NM_001161577, intron 1 of 8) 1946 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr8-4761 chr8 143259099 143259309 + 8.48 0.000 intron (NM_173832, intron 2 of 2) L1ME3E|LINE|L1 -8241 NM_138465 2738 Hs.400533 NM_138465 ENSG00000250571 GLI4 HKR4|ZNF928 GLI family zinc finger 4 protein-coding chr12-6258 chr12 42873352 42873562 + 8.48 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 181241 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr5-2843 chr5 64347243 64347453 + 8.48 0.000 intron (NM_001113561, intron 7 of 7) intron (NM_001113561, intron 7 of 7) -158667 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr4-4992 chr4 136411429 136411639 + 8.48 0.000 Intergenic Intergenic -497854 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr15-5234 chr15 97047299 97047509 + 8.48 0.000 Intergenic Intergenic 263969 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr3-11123 chr3 186772755 186772965 + 8.48 0.000 Intergenic CpG -10717 NM_001967 1974 Hs.518475 NM_001967 ENSG00000156976 EIF4A2 BM-010|DDX2B|EIF4A|EIF4F|eIF-4A-II|eIF4A-II eukaryotic translation initiation factor 4A2 protein-coding chr20-4050 chr20 37429369 37429579 + 8.48 0.000 Intergenic L2a|LINE|L2 83346 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr5-5204 chr5 113612351 113612561 + 8.48 0.000 Intergenic Intergenic 98762 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr19-3922 chr19 46768936 46769146 + 8.48 0.000 Intergenic LTR5B|LTR|ERVK 15773 NM_001145145 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding chr22-2112 chr22 30453723 30453933 + 8.48 0.000 Intergenic Intergenic 18219 NM_001257382 266629 Hs.505601 NM_174975 ENSG00000100012 SEC14L3 TAP2 SEC14 like lipid binding 3 protein-coding chr10-5228 chr10 64039181 64039391 + 8.48 0.000 Intergenic Intergenic -517396 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr6-4129 chr6 161079820 161080030 + 8.48 0.000 intron (NM_005922, intron 5 of 26) intron (NM_005922, intron 5 of 26) 82057 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr1-9627 chr1 46329835 46330045 + 8.48 0.000 Intergenic LTR5_Hs|LTR|ERVK -10237 NR_045790 387338 Hs.163424 NM_199044 ENSG00000117481 NSUN4 SHTAP NOP2/Sun RNA methyltransferase 4 protein-coding chr8-6234 chr8 38676252 38676462 + 8.48 0.000 Intergenic HAL1|LINE|L1 -51829 NR_148048 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr15-4543 chr15 56489133 56489343 + 8.48 0.000 Intergenic Intergenic -24101 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr15-2383 chr15 51846962 51847172 + 8.48 0.000 intron (NM_014547, intron 1 of 9) intron (NM_014547, intron 1 of 9) 17414 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr2-5474 chr2 129941657 129941867 + 8.48 0.000 intron (NR_110285, intron 3 of 3) AluSz|SINE|Alu -7445 NR_026740 389033 Hs.380682 NR_026740 ENSG00000214100 PLAC9P1 - placenta associated 9 pseudogene 1 pseudo chr4-7712 chr4 89453343 89453553 + 8.48 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -145648 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr20-1282 chr20 48722248 48722458 + 8.48 0.000 intron (NM_020820, intron 5 of 39) L1MB8|LINE|L1 105646 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr2-14039 chr2 194610544 194610754 + 8.48 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 -119946 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr1-12761 chr1 70706787 70706997 + 8.48 0.000 intron (NR_125938, intron 1 of 6) LTR1B0|LTR|ERV1 439 NR_125938 101927244 Hs.568660 NR_125938 ENSG00000229051 LINC01788 - long intergenic non-protein coding RNA 1788 ncRNA chr8-3892 chr8 38514070 38514280 + 8.48 0.000 intron (NM_001369354, intron 1 of 1) intron (NM_001369354, intron 1 of 1) 14487 NM_207412 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr4-5124 chr4 151262026 151262236 + 8.48 0.000 Intergenic Intergenic -15042 NM_183375 345062 Hs.651266 NM_183375 ENSG00000189099 PRSS48 ESSPL serine protease 48 protein-coding chr10-3351 chr10 14386219 14386429 + 8.48 0.000 Intergenic MIR3|SINE|MIR -3047 NR_036181 100422843 NR_036181 ENSG00000266321 MIR4293 - microRNA 4293 ncRNA chr15-2513 chr15 39094267 39094477 + 8.48 0.000 Intergenic Intergenic -156297 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr13-3909 chr13 54947818 54948028 + 8.48 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -226531 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr20-3353 chr20 31813672 31813882 + 8.48 0.000 Intergenic MER5B|DNA|hAT-Charlie -5598 NM_033118 85366 Hs.86092 NM_033118 ENSG00000101306 MYLK2 KMLC|MLCK|MLCK2|skMLCK myosin light chain kinase 2 protein-coding chr11-7040 chr11 119551902 119552112 + 8.48 0.000 Intergenic Arthur1|DNA|hAT-Tip100 -127022 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr1-15415 chr1 152062990 152063200 + 8.48 0.000 Intergenic Intergenic 17829 NM_001310142 100131107 NM_001310142 LOC100131107 - putative UPF0607 protein ENSP00000383783 protein-coding chr20-1531 chr20 46348695 46348905 + 8.48 0.000 TTS (NM_001281458) TTS (NM_001281458) 15625 NM_015945 51006 Hs.593344 NM_015945 ENSG00000080189 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 member C2 protein-coding chr8-7430 chr8 140562521 140562731 + 8.48 0.000 exon (NM_012154, exon 4 of 19) exon (NM_012154, exon 4 of 19) 50630 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr2-7544 chr2 23124110 23124320 + 8.48 0.000 Intergenic LTR16A1|LTR|ERVL -260964 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr15-2313 chr15 76090472 76090682 + 8.48 0.000 intron (NM_152335, intron 1 of 10) L2c|LINE|L2 30592 NM_152335 123591 Hs.661411 NM_152335 ENSG00000169758 TMEM266 C15orf27|HVRP1|HsHVRP1|hTMEM266 transmembrane protein 266 protein-coding chr7-3540 chr7 11467226 11467436 + 8.48 0.000 intron (NM_015204, intron 9 of 26) intron (NM_015204, intron 9 of 26) 364867 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr8-4341 chr8 100438009 100438219 + 8.48 0.000 Intergenic Intergenic 55351 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr2-5680 chr2 202261625 202261835 + 8.48 0.000 Intergenic Intergenic -4033 NM_015934 51602 Hs.471104 NM_015934 ENSG00000055044 NOP58 HSPC120|NOP5|NOP5/NOP58 NOP58 ribonucleoprotein protein-coding chr11-6840 chr11 96228677 96228887 + 8.48 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -112656 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr20-1400 chr20 18261099 18261309 + 8.48 0.000 Intergenic AluSp|SINE|Alu -27024 NM_001282995 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr8-5594 chr8 93226994 93227204 + 8.48 0.000 Intergenic MER96B|DNA|hAT-Tip100 -60249 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr11-6697 chr11 78172095 78172305 + 8.48 0.000 3' UTR (NM_001029859, exon 2 of 2) 3' UTR (NM_001029859, exon 2 of 2) 16426 NM_001029859 283219 Hs.528439 NM_001029859 ENSG00000188997 KCTD21 KCASH2 potassium channel tetramerization domain containing 21 protein-coding chr1-12810 chr1 85302646 85302856 + 8.48 0.000 Intergenic Intergenic -26119 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr2-5599 chr2 177147139 177147349 + 8.48 0.000 Intergenic Intergenic 65167 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr6-6865 chr6 10276129 10276339 + 8.48 0.000 Intergenic L1MD1|LINE|L1 -128268 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr18-755 chr18 2979429 2979639 + 8.48 0.000 intron (NM_014646, intron 1 of 19) intron (NM_014646, intron 1 of 19) 32413 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr17-5194 chr17 13749998 13750208 + 8.48 0.000 Intergenic Intergenic -148174 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr4-3386 chr4 26345774 26345984 + 8.48 0.000 intron (NM_001363577, intron 1 of 10) intron (NM_001363577, intron 1 of 10) 24651 NM_001363577 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr2-7915 chr2 58242401 58242611 + 8.48 0.000 Intergenic MER39|LTR|ERV1 -1126 NM_001114636 55120 Hs.631890 NM_018062 ENSG00000115392 FANCL FAAP43|PHF9|POG FA complementation group L protein-coding chr9-3829 chr9 129879985 129880195 + 8.48 0.000 intron (NM_001008563, intron 24 of 25) intron (NM_001008563, intron 24 of 25) 10485 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr1-4897 chr1 37442316 37442526 + 8.48 0.000 Intergenic (CTCT)n|Simple_repeat|Simple_repeat 32022 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr3-5960 chr3 46509633 46509843 + 8.48 0.000 Intergenic MLT2B2|LTR|ERVL 11762 NM_031440 83597 Hs.196584 NM_031440 ENSG00000163825 RTP3 LTM1|TMEM7|Z3CXXC3 receptor transporter protein 3 protein-coding chr1-10337 chr1 153642247 153642457 + 8.48 0.000 exon (NM_001317077, exon 4 of 5) exon (NM_001317077, exon 4 of 5) -7991 NM_001024210 6284 Hs.516505 NM_005979 ENSG00000189171 S100A13 - S100 calcium binding protein A13 protein-coding chr14-4511 chr14 38420048 38420258 + 8.48 0.000 Intergenic Intergenic -164060 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr4-4876 chr4 115187361 115187571 + 8.48 0.000 Intergenic THE1C|LTR|ERVL-MaLR -73846 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr10-8380 chr10 81250819 81251029 + 8.48 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger 601127 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr4-4579 chr4 75682835 75683045 + 8.48 0.000 Intergenic AluSc5|SINE|Alu -9457 NM_203505 9908 Hs.303676 NM_012297 ENSG00000138757 G3BP2 - G3BP stress granule assembly factor 2 protein-coding chr20-834 chr20 18137281 18137491 + 8.48 0.000 promoter-TSS (NM_001164811) promoter-TSS (NM_001164811) -477 NM_001164811 100303755 Hs.488051 NM_001164811 ENSG00000232838 PET117 CSRP2BP PET117 cytochrome c oxidase chaperone protein-coding chr5-1133 chr5 96808339 96808549 + 8.48 0.000 promoter-TSS (NM_001040458) promoter-TSS (NM_001040458) -255 NM_001349244 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr13-2256 chr13 26900973 26901183 + 8.48 0.000 Intergenic Intergenic -140292 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr9-4177 chr9 21677931 21678141 + 8.48 0.000 Intergenic Intergenic -118238 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr8-1752 chr8 27669996 27670206 + 8.48 0.000 intron (NM_182826, intron 5 of 5) L2c|LINE|L2 -31576 NR_037417 100500858 NR_037417 ENSG00000284351 MIR3622A mir-3622a microRNA 3622a ncRNA chr6-1240 chr6 157414623 157414833 + 8.48 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 33538 NM_153746 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr9-5218 chr9 75559899 75560109 + 8.48 0.000 Intergenic L1PA15|LINE|L1 -330640 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr17-5123 chr17 7098009 7098219 + 8.48 0.000 Intergenic HAL1|LINE|L1 16196 NM_080914 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chr7-2032 chr7 77258059 77258269 + 8.48 0.000 intron (NM_020879, intron 6 of 18) LTR16A1|LTR|ERVL -58345 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding chr14-3498 chr14 102910028 102910238 + 8.48 0.000 3' UTR (NM_003300, exon 11 of 11) 3' UTR (NM_003300, exon 11 of 11) -12523 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr7-8480 chr7 50185607 50185817 + 8.48 0.000 Intergenic MIRb|SINE|MIR 89626 NM_001161834 100130988 Hs.99248 NM_001161834 ENSG00000164500 SPATA48 C7orf72 spermatogenesis associated 48 protein-coding chr4-7210 chr4 42085611 42085821 + 8.48 0.000 intron (NM_006345, intron 17 of 17) intron (NM_006345, intron 17 of 17) 66939 NM_001159547 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chrX-3898 chrX 7889178 7889388 + 8.48 0.000 Intergenic Intergenic 38130 NM_004650 8228 Hs.264 NM_004650 ENSG00000006757 PNPLA4 DXS1283E|GS2|iPLA2eta patatin like phospholipase domain containing 4 protein-coding chr18-2510 chr18 64063843 64064053 + 8.48 0.000 Intergenic Intergenic -40143 NR_033881 284294 Hs.385642 NR_033881 ENSG00000267134 LINC01924 - long intergenic non-protein coding RNA 1924 ncRNA chr11-8930 chr11 17621986 17622196 + 8.48 0.000 intron (NM_001277269, intron 38 of 54) MIR3|SINE|MIR 74718 NM_001277269 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding chr13-2029 chr13 45588597 45588807 + 8.48 0.000 intron (NM_182542, intron 4 of 14) intron (NM_182542, intron 4 of 14) 27037 NM_182542 220081 Hs.668747 NM_182542 ENSG00000165837 ERICH6B FAM194B glutamate rich 6B protein-coding chr21-1959 chr21 46083137 46083347 + 8.48 0.000 Intergenic Intergenic -14870 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr10-8841 chr10 110409439 110409649 + 8.48 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -88363 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr22-2797 chr22 42653087 42653297 + 8.48 0.000 Intergenic Intergenic -3800 NM_000398 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr10-5963 chr10 123440626 123440836 + 8.48 0.000 Intergenic Intergenic -225624 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr1-10878 chr1 205974174 205974384 + 8.48 0.000 intron (NR_110983, intron 3 of 3) (CA)n|Simple_repeat|Simple_repeat 16354 NR_110982 103021295 Hs.741319 NR_110982 LOC103021295 - uncharacterized LOC103021295 ncRNA chr5-6654 chr5 54229257 54229467 + 8.48 0.000 intron (NM_019087, intron 1 of 4) intron (NM_019087, intron 1 of 4) 81211 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr1-12297 chr1 236327720 236327930 + 8.48 0.000 Intergenic Intergenic -45867 NM_019891 56605 Hs.558519 NM_019891 ENSG00000086619 ERO1B ERO1LB|Ero1beta endoplasmic reticulum oxidoreductase 1 beta protein-coding chr11-4564 chr11 124086373 124086583 + 8.48 0.000 Intergenic Intergenic -28926 NM_198315 4013 Hs.152944 NM_014622 ENSG00000110002 VWA5A BCSC-1|BCSC1|LOH11CR2A von Willebrand factor A domain containing 5A protein-coding chr9-7438 chr9 25657889 25658099 + 8.48 0.000 Intergenic Intergenic 20864 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr1-10198 chr1 112631153 112631363 + 8.48 0.000 intron (NM_006135, intron 1 of 9) intron (NM_006135, intron 1 of 9) 11426 NM_006135 829 Hs.744974 NM_006135 ENSG00000116489 CAPZA1 CAPPA1|CAPZ|CAZ1 capping actin protein of muscle Z-line subunit alpha 1 protein-coding chr5-8075 chr5 95264852 95265062 + 8.48 0.000 intron (NM_024717, intron 1 of 22) MLT1K|LTR|ERVL-MaLR 19618 NM_024717 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr5-3062 chr5 33310267 33310477 + 8.48 0.000 Intergenic Intergenic 80637 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr20-3218 chr20 57940359 57940569 + 8.48 0.000 Intergenic Intergenic -63440 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr5-5782 chr5 174171879 174172089 + 8.48 0.000 Intergenic Intergenic 126278 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr12-4229 chr12 107610342 107610552 + 8.48 0.000 intron (NM_001018072, intron 5 of 16) intron (NM_001018072, intron 5 of 16) 29573 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr1-12957 chr1 152980042 152980252 + 8.48 0.000 Intergenic MIRb|SINE|MIR -3934 NM_005987 6698 Hs.46320 NM_005987 ENSG00000169474 SPRR1A SPRK small proline rich protein 1A protein-coding chr3-11187 chr3 193124393 193124603 + 8.48 0.000 Intergenic Intergenic -116724 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr5-5611 chr5 152557212 152557422 + 8.48 0.000 Intergenic Intergenic -152038 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr9-5043 chr9 31211528 31211738 + 8.48 0.000 Intergenic L1MB7|LINE|L1 169857 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr5-3018 chr5 9439686 9439896 + 8.48 0.000 intron (NM_003966, intron 1 of 22) intron (NM_003966, intron 1 of 22) -71542 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr18-3105 chr18 36091732 36091942 + 8.48 0.000 Intergenic Intergenic -24243 NM_001303413 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr14-3331 chr14 89095216 89095426 + 8.48 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 270670 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr3-4638 chr3 24943908 24944118 + 8.48 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 114690 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr3-2852 chr3 32827484 32827694 + 8.48 0.000 intron (NM_001039111, intron 1 of 3) intron (NM_001039111, intron 1 of 3) 9592 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr14-4390 chr14 29174675 29174885 + 8.48 0.000 Intergenic HERVL-int|LTR|ERVL -388993 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr11-5956 chr11 17473278 17473488 + 8.48 0.000 intron (NR_147094, intron 2 of 37) intron (NR_147094, intron 2 of 37) 3462 NR_147094 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr21-1520 chr21 44889948 44890158 + 8.48 0.000 exon (NM_000211, exon 12 of 16) exon (NM_000211, exon 12 of 16) -16150 NR_104597 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF PTTG1 interacting protein protein-coding chr9-7845 chr9 84450539 84450749 + 8.48 0.000 Intergenic LTR8|LTR|ERV1 -81917 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr17-5053 chr17 2610572 2610782 + 8.48 0.000 intron (NM_000430, intron 1 of 10) MER30|DNA|hAT-Charlie 17023 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr5-5264 chr5 121492353 121492563 + 8.48 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 169908 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr19-3597 chr19 50212779 50212989 + 8.48 0.000 intron (NM_024729, intron 2 of 40) intron (NM_024729, intron 2 of 40) 9256 NM_024729 79784 Hs.467142 NM_024729 ENSG00000105357 MYH14 DFNA4|DFNA4A|FP17425|MHC16|MYH17|NMHC II-C|NMHC-II-C|PNMHH|myosin myosin heavy chain 14 protein-coding chr10-4962 chr10 29054449 29054659 + 8.48 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 208146 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr6-4321 chr6 16302767 16302977 + 8.48 0.000 3' UTR (NM_001128164, exon 8 of 8) 3' UTR (NM_001128164, exon 8 of 8) 64285 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr11-6430 chr11 66194602 66194812 + 8.48 0.000 intron (NM_018026, intron 2 of 23) Tigger14a|DNA|TcMar-Tigger -62587 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr6-2230 chr6 44609759 44609969 + 8.48 0.000 Intergenic Intergenic -57983 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr8-7373 chr8 138184437 138184647 + 8.48 0.000 intron (NM_015912, intron 9 of 19) intron (NM_015912, intron 9 of 19) -100997 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chr11-4397 chr11 78040485 78040695 + 8.48 0.000 intron (NM_001203262, intron 1 of 2) intron (NM_001203262, intron 1 of 2) 5601 NM_001282406 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr6-5606 chr6 42961349 42961559 + 8.48 0.000 intron (NM_018960, intron 1 of 5) MIR|SINE|MIR 700 NM_018960 27232 Hs.144914 NM_018960 ENSG00000124713 GNMT HEL-S-182mP glycine N-methyltransferase protein-coding chr2-12930 chr2 101584071 101584281 + 8.48 0.000 Intergenic L1MA4|LINE|L1 -109064 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr17-5227 chr17 17188046 17188256 + 8.48 0.000 3' UTR (NM_015134, exon 23 of 23) 3' UTR (NM_015134, exon 23 of 23) 18182 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr11-5452 chr11 73176459 73176669 + 8.48 0.000 Intergenic L3b|LINE|CR1 -34246 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr1-13019 chr1 162276040 162276250 + 8.48 0.000 intron (NM_014697, intron 2 of 9) intron (NM_014697, intron 2 of 9) -66401 NR_030283 693141 NR_030283 ENSG00000207729 MIR556 MIRN556|hsa-mir-556|mir-556 microRNA 556 ncRNA chr19-5332 chr19 3684023 3684233 + 8.48 0.000 intron (NM_001195733, intron 1 of 16) intron (NM_001195733, intron 1 of 16) 16340 NM_012398 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr17-4178 chr17 5706965 5707175 + 8.48 0.000 Intergenic Intergenic -65164 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr4-4940 chr4 125714922 125715132 + 8.48 0.000 Intergenic Intergenic 207768 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr5-3174 chr5 73464405 73464615 + 8.48 0.000 intron (NR_126410, intron 3 of 4) intron (NR_126410, intron 3 of 4) 8456 NR_126410 104355294 Hs.127927 NR_126410 ENSG00000251324 LINC01386 - long intergenic non-protein coding RNA 1386 ncRNA chr3-6651 chr3 128499978 128500188 + 8.48 0.000 intron (NR_125398, intron 2 of 2) L2b|LINE|L2 -6896 NM_032638 2624 Hs.367725 NM_032638 ENSG00000179348 GATA2 DCML|IMD21|MONOMAC|NFE1B GATA binding protein 2 protein-coding chr19-4671 chr19 17240473 17240683 + 8.48 0.000 intron (NM_005234, intron 2 of 3) intron (NM_005234, intron 2 of 3) 4764 NM_005234 2063 Hs.466148 NM_005234 ENSG00000160113 NR2F6 EAR-2|EAR2|ERBAL2 nuclear receptor subfamily 2 group F member 6 protein-coding chr2-9028 chr2 197708476 197708686 + 8.48 0.000 TTS (NM_138395) TTS (NM_138395) 3212 NM_138395 92935 Hs.744330 NM_138395 ENSG00000247626 MARS2 COXPD25|MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding chr8-3686 chr8 17518303 17518513 + 8.48 0.000 intron (NM_001370338, intron 2 of 12) intron (NM_001370338, intron 2 of 12) -20369 NM_001164771 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr17-4270 chr17 64551373 64551583 + 8.48 0.000 intron (NM_022739, intron 16 of 18) intron (NM_022739, intron 16 of 18) 44501 NM_001316990 90799 Hs.569713 NM_138363 ENSG00000258890 CEP95 CCDC45 centrosomal protein 95 protein-coding chr20-4374 chr20 57050913 57051123 + 8.48 0.000 Intergenic Intergenic -162678 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr7-6577 chr7 76306587 76306797 + 8.48 0.000 Intergenic Intergenic 4019 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr4-8693 chr4 181380191 181380401 + 8.48 0.000 Intergenic MIR|SINE|MIR -115267 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr11-10183 chr11 94639039 94639249 + 8.48 0.000 intron (NR_135096, intron 4 of 6) intron (NR_135096, intron 4 of 6) 71776 NM_152431 143689 Hs.660188 NM_152431 ENSG00000134627 PIWIL4 HIWI2|MIWI2 piwi like RNA-mediated gene silencing 4 protein-coding chr2-8470 chr2 124485742 124485952 + 8.48 0.000 intron (NM_001367498, intron 7 of 23) LTR41C|LTR|ERVL 460560 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr12-4857 chr12 59509400 59509610 + 8.48 0.000 Intergenic L1MA3|LINE|L1 -86524 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr17-3224 chr17 7650209 7650419 + 8.48 0.000 promoter-TSS (NM_001678) promoter-TSS (NM_001678) -612 NM_001678 482 Hs.643540 NM_001678 ENSG00000129244 ATP1B2 AMOG ATPase Na+/K+ transporting subunit beta 2 protein-coding chr5-3791 chr5 77224891 77225101 + 8.48 0.000 intron (NM_001029853, intron 1 of 20) L1MC5|LINE|L1 14316 NM_001029853 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr10-3931 chr10 90666435 90666645 + 8.48 0.000 Intergenic THE1D|LTR|ERVL-MaLR -125735 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr9-7014 chr9 116633101 116633311 + 8.48 0.000 intron (NM_014010, intron 16 of 21) intron (NM_014010, intron 16 of 21) 54009 NM_198186 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chrX-2447 chrX 81202668 81202878 + 8.48 0.000 promoter-TSS (NM_030763) promoter-TSS (NM_030763) 671 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr8-2652 chr8 73504510 73504720 + 8.48 0.000 intron (NM_001164383, intron 8 of 9) intron (NM_001164383, intron 8 of 9) 84541 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA chr4-7578 chr4 79496430 79496640 + 8.48 0.000 intron (NR_038826, intron 2 of 3) MER2|DNA|TcMar-Tigger 3942 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr2-8993 chr2 192934499 192934709 + 8.48 0.000 Intergenic L1MA3|LINE|L1 184759 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chrX-4574 chrX 70730517 70730727 + 8.48 0.000 intron (NM_001003811, intron 12 of 30) L1PA4|LINE|L1 115673 NR_145758 109617015 NR_145758 ENSG00000280704 SNORD3E - small nucleolar RNA, C/D box 3E snoRNA chr10-6233 chr10 61048576 61048786 + 8.48 0.000 Intergenic LTR33|LTR|ERVL 32406 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr10-6839 chr10 22525111 22525321 + 8.48 0.000 Intergenic L1PA8|LINE|L1 -87287 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr9-3471 chr9 6319193 6319403 + 8.48 0.000 Intergenic L1PB1|LINE|L1 -9077 NM_001001875 89882 Hs.351815 NM_033516 ENSG00000170777 TPD52L3 D55|NYDSP25|hD55 TPD52 like 3 protein-coding chr7-6770 chr7 17406797 17407007 + 8.48 0.000 intron (NR_110015, intron 1 of 2) MLT2B3|LTR|ERVL 31985 NR_110015 102659288 Hs.559488 NR_110014 KCCAT333 - renal clear cell carcinoma-associated transcript 333 ncRNA chr9-7556 chr9 35395627 35395837 + 8.48 0.000 intron (NM_006377, intron 25 of 38) intron (NM_006377, intron 25 of 38) -11023 NR_110320 158381 Hs.575661 NR_003581 ENSG00000179766 ATP8B5P FetA ATPase phospholipid transporting 8B5, pseudogene pseudo chr3-7930 chr3 150412731 150412941 + 8.48 0.000 intron (NM_001303264, intron 1 of 2) intron (NM_001303264, intron 1 of 2) 4538 NM_001303264 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chrX-1883 chrX 130886063 130886273 + 8.48 0.000 intron (NM_006375, intron 2 of 14) intron (NM_006375, intron 2 of 14) 17149 NM_001281736 10495 Hs.171458 NM_006375 ENSG00000165675 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding chr3-7623 chr3 22560189 22560399 + 8.48 0.000 Intergenic Intergenic 603155 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr15-2964 chr15 50180156 50180366 + 8.48 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -1935 NM_001159629 11001 Hs.11729 NM_003645 ENSG00000140284 SLC27A2 ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1 solute carrier family 27 member 2 protein-coding chr17-7242 chr17 1919190 1919400 + 8.48 0.000 Intergenic Intergenic 89290 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr7-4328 chr7 41662012 41662222 + 8.48 0.000 Intergenic Intergenic -31802 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr3-5418 chr3 168713092 168713302 + 8.48 0.000 intron (NR_021485, intron 6 of 15) intron (NR_021485, intron 6 of 15) 161343 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr8-3093 chr8 28069886 28070096 + 8.48 0.000 intron (NM_001010906, intron 3 of 18) intron (NM_001010906, intron 3 of 18) 13945 NM_001010906 389643 Hs.370129 NM_001010906 ENSG00000189233 NUGGC C8orf80|HMFN0672|SLIP-GC nuclear GTPase, germinal center associated protein-coding chr12-3199 chr12 53614046 53614256 + 8.48 0.000 intron (NR_073163, intron 1 of 12) intron (NR_073163, intron 1 of 12) 11839 NM_001366556 11016 Hs.12286 NM_006856 ENSG00000170653 ATF7 ATFA activating transcription factor 7 protein-coding chr13-1199 chr13 49454627 49454837 + 8.48 0.000 intron (NM_001320727, intron 2 of 19) L1MC3|LINE|L1 10458 NM_001320699 83852 Hs.631789 NM_031915 ENSG00000136169 SETDB2 C13orf4|CLLD8|CLLL8|KMT1F SET domain bifurcated histone lysine methyltransferase 2 protein-coding chr7-9521 chr7 139471964 139472174 + 8.48 0.000 intron (NM_198508, intron 3 of 4) intron (NM_198508, intron 3 of 4) 11604 NM_198508 346689 Hs.17572 NM_198508 ENSG00000188883 KLRG2 CLEC15B killer cell lectin like receptor G2 protein-coding chr1-8604 chr1 186212818 186213028 + 8.48 0.000 Intergenic Intergenic -83350 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr2-8673 chr2 149542024 149542234 + 8.48 0.000 Intergenic MIR3|SINE|MIR -45229 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr3-6665 chr3 129546323 129546533 + 8.48 0.000 intron (NM_153833, intron 1 of 4) L1MC5|LINE|L1 -1957 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr5-5927 chr5 65987754 65987964 + 8.48 0.000 intron (NM_001253697, intron 1 of 25) AluSz|SINE|Alu -42286 NR_028474 100303749 Hs.608060 NR_028474 LOC100303749 - LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene pseudo chr18-1619 chr18 47712139 47712349 + 8.48 0.000 Intergenic Intergenic 218415 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr10-8324 chr10 78849595 78849805 + 8.48 0.000 Intergenic Intergenic 217748 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr5-3696 chr5 5306866 5307076 + 8.48 0.000 intron (NM_139056, intron 21 of 22) intron (NM_139056, intron 21 of 22) -115706 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr10-844 chr10 5577262 5577472 + 8.48 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 18751 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr17-5530 chr17 43401253 43401463 + 8.48 0.000 TTS (NM_001661) TTS (NM_001661) 2365 NM_001661 379 Hs.183153 NM_001661 ENSG00000175906 ARL4D ARF4L|ARL6 ADP ribosylation factor like GTPase 4D protein-coding chr5-2384 chr5 92230183 92230393 + 8.48 0.000 Intergenic MER94|DNA|hAT-Blackjack -846971 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr4-2484 chr4 8202697 8202907 + 8.48 0.000 intron (NM_018986, intron 1 of 17) intron (NM_018986, intron 1 of 17) 3512 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr2-8788 chr2 166827271 166827481 + 8.48 0.000 Intergenic L1MC3|LINE|L1 -61111 NM_152381 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr8-6079 chr8 26594417 26594627 + 8.48 0.000 intron (NM_001244604, intron 3 of 13) (ATCT)n|Simple_repeat|Simple_repeat 16117 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr10-1530 chr10 76786038 76786248 + 8.48 0.000 Intergenic Intergenic -101901 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr1-9847 chr1 64044097 64044307 + 8.48 0.000 intron (NM_005012, intron 2 of 8) intron (NM_005012, intron 2 of 8) 68003 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr6-8155 chr6 131040616 131040826 + 8.48 0.000 intron (NM_001135554, intron 1 of 14) L1MC5a|LINE|L1 22524 NM_001431 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr18-1216 chr18 37328281 37328491 + 8.48 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 53926 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chrX-2874 chrX 145037363 145037573 + 8.48 0.000 Intergenic L1M1|LINE|L1 -210035 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr1-12448 chr1 15500019 15500229 + 8.48 0.000 intron (NM_001278054, intron 2 of 4) intron (NM_001278054, intron 2 of 4) 24020 NM_015849 51032 Hs.631871 NM_015849 ENSG00000215704 CELA2B ELA2B chymotrypsin like elastase 2B protein-coding chr15-2357 chr15 39833686 39833896 + 8.48 0.000 intron (NM_001271854, intron 1 of 3) intron (NM_001271854, intron 1 of 3) -4515 NM_001271855 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr17-3816 chr17 41939084 41939294 + 8.48 0.000 intron (NR_146622, intron 7 of 11) intron (NR_146622, intron 7 of 11) 8572 NR_146621 83538 Hs.201134 NM_031421 ENSG00000204815 TTC25 - tetratricopeptide repeat domain 25 protein-coding chr17-4949 chr17 78267186 78267396 + 8.48 0.000 intron (NR_073178, intron 4 of 6) intron (NR_073178, intron 4 of 6) 11201 NR_073178 100996291 Hs.744493 NR_073178 ENSG00000204277 LINC01993 - long intergenic non-protein coding RNA 1993 ncRNA chr3-3134 chr3 157081676 157081886 + 8.48 0.000 promoter-TSS (NR_135546) promoter-TSS (NR_135546) -60 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA chr17-3818 chr17 42049769 42049979 + 8.48 0.000 intron (NM_001358661, intron 1 of 2) MER3|DNA|hAT-Charlie 727 NM_001358661 110806298 Hs.127116 NM_001358661 ENSG00000267221 C17orf113 - chromosome 17 open reading frame 113 protein-coding chr7-6733 chr7 5329216 5329426 + 8.48 0.000 intron (NM_001080495, intron 19 of 29) AluSx1|SINE|Alu 46378 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr5-7189 chr5 6481597 6481807 + 8.48 0.000 intron (NM_001145161, intron 1 of 1) intron (NM_001145161, intron 1 of 1) 32843 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr1-12852 chr1 99020421 99020631 + 8.48 0.000 intron (NR_033940, intron 1 of 2) L2b|LINE|L2 -15665 NM_001010861 163404 Hs.483948 NM_001010861 ENSG00000117598 PLPPR5 LPPR5|PAP2|PAP2D|PRG5 phospholipid phosphatase related 5 protein-coding chr14-1397 chr14 54085660 54085870 + 8.48 0.000 Intergenic Intergenic -128874 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr7-8871 chr7 90242134 90242344 + 8.48 0.000 Intergenic Intergenic -2935 NM_001160138 79846 Hs.521014 NM_024788 ENSG00000105792 CFAP69 C7orf63|FAP69|SPGF24 cilia and flagella associated protein 69 protein-coding chr12-8225 chr12 124054620 124054830 + 8.48 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 81510 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr15-1964 chr15 38626532 38626742 + 8.48 0.000 Intergenic Intergenic -61823 NM_001128602 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr13-2096 chr13 77387538 77387748 + 8.48 0.000 Intergenic Intergenic -60549 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr2-11877 chr2 23210691 23210901 + 8.48 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -174383 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr20-4493 chr20 63102799 63103009 + 8.48 0.000 promoter-TSS (NR_003245) promoter-TSS (NR_003245) -585 NR_003245 768097 Hs.635159 NR_003245 ENSG00000231133 HAR1B HAR1R|LINC00065|NCRNA00065 highly accelerated region 1B ncRNA chr3-9206 chr3 37114836 37115046 + 8.48 0.000 intron (NM_001348297, intron 6 of 23) intron (NM_001348297, intron 6 of 23) 59641 NM_006309 9209 Hs.740522 NM_006309 ENSG00000093167 LRRFIP2 HUFI-2 LRR binding FLII interacting protein 2 protein-coding chr5-6545 chr5 13242035 13242245 + 8.48 0.000 Intergenic Intergenic -209254 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chrX-2855 chrX 140798593 140798803 + 8.48 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -14140 NM_004065 1038 Hs.446675 NM_004065 ENSG00000184258 CDR1 CDR|CDR34|CDR62A cerebellar degeneration related protein 1 protein-coding chr2-6431 chr2 149797800 149798010 + 8.48 0.000 intron (NR_145421, intron 3 of 4) intron (NR_145421, intron 3 of 4) 61286 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr2-3929 chr2 57755737 57755947 + 8.48 0.000 Intergenic Intergenic -151809 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr10-8983 chr10 120051204 120051414 + 8.48 0.000 Intergenic Intergenic 92796 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr2-8974 chr2 190511193 190511403 + 8.48 0.000 intron (NR_136298, intron 7 of 8) intron (NR_136298, intron 7 of 8) 23424 NR_136298 100131211 Hs.659824 NM_001142645 ENSG00000189362 NEMP2 TMEM194B nuclear envelope integral membrane protein 2 protein-coding chr14-2292 chr14 59439265 59439475 + 8.48 0.000 Intergenic Intergenic 26010 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding chr5-1892 chr5 151671450 151671660 + 8.48 0.000 intron (NM_001309443, intron 5 of 9) intron (NM_001309443, intron 5 of 9) -5390 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr1-9400 chr1 31636582 31636792 + 8.48 0.000 intron (NM_012392, intron 1 of 4) MIRb|SINE|MIR 7930 NM_001359651 553115 Hs.470417 NM_012392 ENSG00000162517 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding chr5-8231 chr5 109586136 109586346 + 8.48 0.000 Intergenic Charlie1a|DNA|hAT-Charlie -103125 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr10-7073 chr10 88361395 88361605 + 8.48 0.000 intron (NM_018363, intron 5 of 6) intron (NM_018363, intron 5 of 6) 221818 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr5-5075 chr5 95726080 95726290 + 8.48 0.000 intron (NM_001349303, intron 1 of 8) Charlie7|DNA|hAT-Charlie -5151 NM_014899 22836 Hs.445030 NM_014899 ENSG00000164292 RHOBTB3 - Rho related BTB domain containing 3 protein-coding chr10-5558 chr10 88386669 88386879 + 8.48 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 196544 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr5-8085 chr5 95834325 95834535 + 8.48 0.000 promoter-TSS (NR_157807) promoter-TSS (NR_157807) -397 NR_157807 102724720 NR_157807 LOC102724720 - uncharacterized LOC102724720 ncRNA chr11-4807 chr11 4509416 4509626 + 8.48 0.000 Intergenic Intergenic 20642 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr5-8027 chr5 89282916 89283126 + 8.48 0.000 intron (NR_136219, intron 7 of 9) intron (NR_136219, intron 7 of 9) -378916 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chrX-1411 chrX 19640766 19640976 + 8.48 0.000 intron (NM_001024666, intron 6 of 16) MER51A|LTR|ERV1 30128 NM_001353897 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr8-5581 chr8 87146485 87146695 + 8.48 0.000 intron (NM_173538, intron 4 of 10) L2a|LINE|L2 280175 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr2-14400 chr2 220489150 220489360 + 8.48 0.000 Intergenic Intergenic -582690 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr8-4631 chr8 133272586 133272796 + 8.48 0.000 intron (NM_001258432, intron 1 of 13) intron (NM_001258432, intron 1 of 13) 24561 NM_001258432 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr12-6467 chr12 97193949 97194159 + 8.48 0.000 Intergenic LTR26C|LTR|ERV1 -268722 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr9-6911 chr9 91863677 91863887 + 8.48 0.000 intron (NM_001318204, intron 1 of 7) L1MB8|LINE|L1 86446 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr13-2454 chr13 49428155 49428365 + 8.48 0.000 intron (NM_001287337, intron 3 of 11) MLT1F|LTR|ERVL-MaLR -14509 NM_001287339 81617 Hs.87159 NM_030925 ENSG00000102547 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39 like protein-coding chr12-6018 chr12 108023284 108023494 + 8.48 0.000 Intergenic L2a|LINE|L2 -105899 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr5-4308 chr5 151581773 151581983 + 8.48 0.000 Intergenic Intergenic -12934 NM_001447 2196 Hs.591255 NM_001447 ENSG00000086570 FAT2 CDHF8|CDHR9|HFAT2|MEGF1|SCA45 FAT atypical cadherin 2 protein-coding chr5-7985 chr5 84249835 84250045 + 8.48 0.000 intron (NM_005711, intron 2 of 10) (TA)n|Simple_repeat|Simple_repeat 134927 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr7-4688 chr7 42691143 42691353 + 8.48 0.000 intron (NR_110833, intron 1 of 2) intron (NR_110833, intron 1 of 2) 15199 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr22-1039 chr22 38008847 38009057 + 8.48 0.000 intron (NM_001301130, intron 5 of 5) L2a|LINE|L2 20158 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr7-4423 chr7 106071586 106071796 + 8.48 0.000 Intergenic Intergenic 40621 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr10-5320 chr10 71007915 71008125 + 8.48 0.000 Intergenic L1ME1|LINE|L1 68967 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr17-7920 chr17 44417587 44417797 + 8.48 0.000 intron (NM_001002909, intron 6 of 7) intron (NM_001002909, intron 6 of 7) 19159 NM_001304943 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr20-3646 chr20 9514614 9514824 + 8.48 0.000 5' UTR (NM_012261, exon 1 of 6) 5' UTR (NM_012261, exon 1 of 6) 129 NM_012261 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chr15-2291 chr15 63564038 63564248 + 8.48 0.000 intron (NM_001256702, intron 7 of 13) intron (NM_001256702, intron 7 of 13) -33244 NM_001367807 283807 Hs.631163 NM_203373 ENSG00000197361 FBXL22 Fbl22 F-box and leucine rich repeat protein 22 protein-coding chr1-12310 chr1 245192757 245192967 + 8.48 0.000 intron (NM_018012, intron 2 of 14) L1PB4|LINE|L1 37877 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr5-5021 chr5 84290650 84290860 + 8.48 0.000 intron (NM_001278642, intron 1 of 9) MER34|LTR|ERV1 94112 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chrX-2885 chrX 148589402 148589612 + 8.48 0.000 intron (NM_001169124, intron 1 of 19) intron (NM_001169124, intron 1 of 19) 88890 NM_001169124 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr8-3167 chr8 95201068 95201278 + 8.48 0.000 Intergenic L2b|LINE|L2 15201 NR_046232 619344 Hs.741630 NR_046232 ENSG00000253351 LINC01298 C8orf69 long intergenic non-protein coding RNA 1298 ncRNA chr4-4733 chr4 93661819 93662029 + 8.48 0.000 intron (NM_001286838, intron 13 of 14) L2a|LINE|L2 -166829 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr8-6959 chr8 106165189 106165399 + 8.48 0.000 Intergenic Intergenic -104791 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr2-10851 chr2 60424065 60424275 + 8.48 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -32795 NR_132992 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr3-4697 chr3 50510514 50510724 + 8.48 0.000 Intergenic Intergenic -6375 NM_001291101 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr7-4732 chr7 55533512 55533722 + 8.48 0.000 intron (NM_030796, intron 1 of 4) intron (NM_030796, intron 1 of 4) 4077 NM_001321242 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr10-4301 chr10 14023214 14023424 + 8.48 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -14769 NM_001318336 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr19-5099 chr19 55481247 55481457 + 8.48 0.000 exon (NM_033113, exon 3 of 3) exon (NM_033113, exon 3 of 3) -3836 NM_020378 57106 Hs.31854 NM_020378 ENSG00000090971 NAT14 KLP1 N-acetyltransferase 14 (putative) protein-coding chr5-8634 chr5 139767410 139767620 + 8.48 0.000 Intergenic AluSz|SINE|Alu -21292 NR_105052 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr11-10745 chr11 133403129 133403339 + 8.48 0.000 intron (NM_001012393, intron 1 of 7) MIR|SINE|MIR 129267 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr10-2855 chr10 69438406 69438616 + 8.48 0.000 Intergenic MIRc|SINE|MIR -12954 NM_012339 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr21-383 chr21 32411674 32411884 + 8.48 0.000 promoter-TSS (NM_001320744) promoter-TSS (NM_001320744) 56 NM_001320745 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr8-2703 chr8 96337928 96338138 + 8.48 0.000 Intergenic Intergenic 48615 NR_125829 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr5-1567 chr5 129904228 129904438 + 8.48 0.000 promoter-TSS (NM_175856) promoter-TSS (NM_175856) -132 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr19-1146 chr19 45450664 45450874 + 8.48 0.000 promoter-TSS (NM_001369417) promoter-TSS (NM_001369417) -3 NM_001369414 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr2-6936 chr2 111966811 111967021 + 8.48 0.000 intron (NM_006343, intron 5 of 18) intron (NM_006343, intron 5 of 18) 68309 NM_006343 10461 Hs.306178 NM_006343 ENSG00000153208 MERTK MER|RP38|Tyro12|c-Eyk|c-mer MER proto-oncogene, tyrosine kinase protein-coding chr16-3348 chr16 26818165 26818375 + 8.48 0.000 Intergenic MER20|DNA|hAT-Charlie -248657 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr2-7251 chr2 229642666 229642876 + 8.48 0.000 intron (NM_139072, intron 1 of 12) L3b|LINE|CR1 71784 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr11-6244 chr11 49454793 49455003 + 8.48 0.000 Intergenic Intergenic -103630 NR_027044 440040 Hs.655746 NR_027044 ENSG00000205035 LOC440040 - glutamate metabotropic receptor 5 pseudogene pseudo chr5-2724 chr5 121010225 121010435 + 8.48 0.000 Intergenic Intergenic -312220 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr4-5760 chr4 62121272 62121482 + 8.48 0.000 intron (NR_110595, intron 4 of 7) MLT1G3|LTR|ERVL-MaLR 40388 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr17-4516 chr17 75340695 75340905 + 8.48 0.000 intron (NM_002086, intron 2 of 5) intron (NM_002086, intron 2 of 5) -51351 NM_001126122 60386 Hs.514470 NM_021734 ENSG00000125454 SLC25A19 DNC|MCPHA|MUP1|THMD3|THMD4|TPC solute carrier family 25 member 19 protein-coding chr4-5535 chr4 114132773 114132983 + 8.48 0.000 Intergenic L1PREC2|LINE|L1 -153231 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr3-3474 chr3 183933354 183933564 + 8.48 0.000 intron (NM_001320032, intron 26 of 29) intron (NM_001320032, intron 26 of 29) 46659 NR_039650 100616127 NR_039650 ENSG00000263932 MIR4448 - microRNA 4448 ncRNA chr5-9180 chr5 178507231 178507441 + 8.48 0.000 intron (NM_173465, intron 2 of 28) L1MC5a|LINE|L1 83057 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr20-2201 chr20 53828794 53829004 + 8.48 0.000 Intergenic Intergenic 46810 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr7-7571 chr7 122381837 122382047 + 8.48 0.000 intron (NM_001167940, intron 24 of 29) intron (NM_001167940, intron 24 of 29) -77192 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chr8-4830 chr8 23063494 23063704 + 8.48 0.000 intron (NM_147187, intron 1 of 9) intron (NM_147187, intron 1 of 9) -4630 NR_038873 286059 Hs.306673 NR_038873 ENSG00000246130 LOC286059 - TNF receptor superfamily member 10d pseudogene pseudo chr12-7662 chr12 83739169 83739379 + 8.48 0.000 Intergenic L1MEg|LINE|L1 1052119 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr10-6546 chr10 71618231 71618441 + 8.48 0.000 TTS (NM_001171932) TTS (NM_001171932) 101442 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr20-2584 chr20 38050149 38050359 + 8.48 0.000 intron (NM_021215, intron 3 of 6) intron (NM_021215, intron 3 of 6) 16508 NM_021215 58490 Hs.278839 NM_021215 ENSG00000101413 RPRD1B C20orf77|CREPT|K-H|Kub5-Hera|NET60|dJ1057B20.2 regulation of nuclear pre-mRNA domain containing 1B protein-coding chr7-6173 chr7 128396399 128396609 + 8.48 0.000 intron (NM_183243, intron 10 of 14) L2b|LINE|L2 9491 NM_001142573 3614 Hs.654401 NM_000883 ENSG00000106348 IMPDH1 IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608 inosine monophosphate dehydrogenase 1 protein-coding chr5-9041 chr5 169048521 169048731 + 8.48 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 35399 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr17-5407 chr17 34138727 34138937 + 8.48 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 17974 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr6-4317 chr6 16055191 16055401 + 8.48 0.000 Intergenic AluSx|SINE|Alu -73790 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr19-4373 chr19 2443199 2443409 + 8.48 0.000 intron (NM_032737, intron 2 of 11) intron (NM_032737, intron 2 of 11) -8304 NR_106958 102466806 NR_106958 ENSG00000283728 MIR7108 hsa-mir-7108 microRNA 7108 ncRNA chr12-8200 chr12 123035048 123035258 + 8.48 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) -24425 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chr7-2278 chr7 23893398 23893608 + 8.48 0.000 Intergenic Intergenic 183284 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr11-7159 chr11 128323391 128323601 + 8.48 0.000 Intergenic Intergenic 114730 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr5-6556 chr5 15304910 15305120 + 8.48 0.000 Intergenic L2b|LINE|L2 -38455 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr20-2389 chr20 18139498 18139708 + 8.48 0.000 intron (NM_001164811, intron 1 of 1) intron (NM_001164811, intron 1 of 1) 1740 NM_001164811 100303755 Hs.488051 NM_001164811 ENSG00000232838 PET117 CSRP2BP PET117 cytochrome c oxidase chaperone protein-coding chr19-5048 chr19 49408280 49408490 + 8.48 0.000 intron (NM_144688, intron 12 of 19) intron (NM_144688, intron 12 of 19) 15056 NM_178449 113091 Hs.339845 NM_178449 ENSG00000142538 PTH2 TIP39 parathyroid hormone 2 protein-coding chr17-6097 chr17 80969576 80969786 + 8.48 0.000 intron (NR_148968, intron 1 of 1) MLT1B|LTR|ERVL-MaLR 1532 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr5-2459 chr5 136133191 136133401 + 8.48 0.000 intron (NM_001001420, intron 1 of 6) CpG 451 NM_001001419 4090 Hs.167700 NM_005903 ENSG00000113658 SMAD5 DWFC|JV5-1|MADH5 SMAD family member 5 protein-coding chr22-2531 chr22 25156556 25156766 + 8.48 0.000 intron (NM_001145206, intron 4 of 10) (TG)n|Simple_repeat|Simple_repeat -43197 NM_004076 1417 Hs.533022 NM_004076 ENSG00000100053 CRYBB3 CATCN2|CRYB3|CTRCT22 crystallin beta B3 protein-coding chr14-4861 chr14 70151723 70151933 + 8.48 0.000 intron (NM_033262, intron 2 of 7) MLT1C|LTR|ERVL-MaLR -35280 NR_135825 646548 NR_135825 LOC646548 - ADAM metallopeptidase domain 20 pseudogene pseudo chr4-4411 chr4 44773403 44773613 + 8.48 0.000 Intergenic MER50-int|LTR|ERV1 -46874 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr1-7936 chr1 171582537 171582747 + 8.48 0.000 intron (NM_015172, intron 28 of 33) Tigger3b|DNA|TcMar-Tigger -37121 NM_001368164 110806290 NM_001368164 MYOCOS - myocilin opposite strand protein-coding chrX-4346 chrX 47749333 47749543 + 8.48 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 42247 NR_033924 392459 Hs.562045 NR_033924 ENSG00000187893 CXXC1P1 CXorf25|NCRNA00236 CXXC finger protein 1 pseudogene 1 pseudo chr10-5234 chr10 64431985 64432195 + 8.48 0.000 Intergenic L1MC4a|LINE|L1 -393438 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr7-3835 chr7 99788021 99788231 + 8.48 0.000 Intergenic L2a|LINE|L2 -3942 NM_017460 1576 Hs.728751 NM_017460 ENSG00000160868 CYP3A4 CP33|CP34|CYP3A|CYP3A3|CYPIIIA3|CYPIIIA4|HLP|NF-25|P450C3|P450PCN1 cytochrome P450 family 3 subfamily A member 4 protein-coding chr5-5959 chr5 109805382 109805592 + 8.48 0.000 intron (NM_002372, intron 12 of 21) intron (NM_002372, intron 12 of 21) -77695 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr3-6575 chr3 123686562 123686772 + 8.48 0.000 intron (NM_001321309, intron 18 of 32) MIRc|SINE|MIR -2977 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr1-6232 chr1 222167323 222167533 + 8.48 0.000 Intergenic Intergenic -188908 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr12-2984 chr12 116533932 116534142 + 8.48 0.000 non-coding (NR_027345, exon 2 of 2) non-coding (NR_027345, exon 2 of 2) 602 NR_027346 100287569 Hs.441601 NM_207436 ENSG00000196668 LINC00173 NCRNA00173 long intergenic non-protein coding RNA 173 ncRNA chr1-5436 chr1 39699268 39699478 + 8.48 0.000 Intergenic Intergenic -7888 NM_001282396 51440 Hs.743975 NM_016257 ENSG00000116983 HPCAL4 HLP4 hippocalcin like 4 protein-coding chr3-5662 chr3 12392103 12392313 + 8.48 0.000 intron (NM_001330615, intron 3 of 5) intron (NM_001330615, intron 3 of 5) 40706 NM_015869 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr4-8044 chr4 120524367 120524577 + 8.48 0.000 Intergenic Intergenic 398394 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr5-2945 chr5 149976247 149976457 + 8.48 0.000 intron (NM_000112, intron 1 of 2) L2c|LINE|L2 15615 NM_000112 1836 Hs.302738 NM_000112 ENSG00000155850 SLC26A2 D5S1708|DTD|DTDST|EDM4|MST153|MSTP157 solute carrier family 26 member 2 protein-coding chr5-9113 chr5 173787353 173787563 + 8.48 0.000 intron (NR_108028, intron 3 of 3) MLT1K|LTR|ERVL-MaLR 3484 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr3-9155 chr3 33021414 33021624 + 8.48 0.000 intron (NM_001079811, intron 12 of 15) intron (NM_001079811, intron 12 of 15) 69875 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr9-1624 chr9 130897174 130897384 + 8.48 0.000 promoter-TSS (NM_198180) promoter-TSS (NM_198180) -467 NM_198180 347148 Hs.660704 NM_198180 ENSG00000188710 QRFP 26RFa|P518 pyroglutamylated RFamide peptide protein-coding chr15-1875 chr15 64975505 64975715 + 8.48 0.000 intron (NM_001127890, intron 3 of 7) L1MB8|LINE|L1 13860 NM_001127889 51324 Hs.242458 NM_016630 ENSG00000090487 SPG21 ABHD21|ACP33|BM-019|GL010|MAST SPG21 abhydrolase domain containing, maspardin protein-coding chrX-1520 chrX 22164359 22164569 + 8.48 0.000 intron (NR_046639, intron 4 of 4) intron (NR_046639, intron 4 of 4) 8519 NR_046639 100873942 Hs.633194 NR_046639 ENSG00000224204 PHEX-AS1 - PHEX antisense RNA 1 ncRNA chr14-5102 chr14 88190931 88191141 + 8.48 0.000 intron (NM_138317, intron 5 of 6) AluJb|SINE|Alu 79875 NM_138318 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr8-2563 chr8 38434527 38434737 + 8.48 0.000 intron (NM_015850, intron 2 of 17) intron (NM_015850, intron 2 of 17) 33092 NM_001174066 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr7-4952 chr7 140605547 140605757 + 8.48 0.000 intron (NM_001318052, intron 1 of 18) intron (NM_001318052, intron 1 of 18) -3110 NR_134477 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding chr3-9064 chr3 25798313 25798523 + 8.48 0.000 Intergenic LTR16B|LTR|ERVL 8328 NM_017897 54995 Hs.55781 NM_017897 ENSG00000151093 OXSM CEM1|FASN2D|KASI|KS 3-oxoacyl-ACP synthase, mitochondrial protein-coding chr1-3588 chr1 10638578 10638788 + 8.48 0.000 3' UTR (NM_001079843, exon 21 of 21) 3' UTR (NM_001079843, exon 21 of 21) 157963 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr14-4063 chr14 59172302 59172512 + 8.48 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -16260 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr13-3573 chr13 26707653 26707863 + 8.48 0.000 Intergenic Intergenic 53028 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr13-2874 chr13 111064857 111065067 + 8.48 0.000 Intergenic Intergenic -30876 NR_120415 101927802 Hs.559193 NR_120415 LINC00368 - long intergenic non-protein coding RNA 368 ncRNA chr11-9667 chr11 67178324 67178534 + 8.48 0.000 intron (NR_027473, intron 2 of 20) L1MB7|LINE|L1 59166 NR_027473 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr1-15943 chr1 188055216 188055426 + 8.48 0.000 Intergenic Intergenic 611693 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chrX-3085 chrX 131007618 131007828 + 8.48 0.000 Intergenic MIRc|SINE|MIR 50423 NR_126350 104266960 Hs.573575 NR_126350 ENSG00000228659 LINC01201 TCONS_00017091 long intergenic non-protein coding RNA 1201 ncRNA chr10-4044 chr10 25814908 25815118 + 8.48 0.000 Intergenic L2c|LINE|L2 118697 NR_120650 101929073 Hs.409816 NR_120650 ENSG00000226304 LOC101929073 - uncharacterized LOC101929073 ncRNA chr15-3805 chr15 72809927 72810137 + 8.48 0.000 Intergenic Intergenic -26274 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr4-776 chr4 113761214 113761424 + 8.48 0.000 5' UTR (NM_001321585, exon 1 of 20) 5' UTR (NM_001321585, exon 1 of 20) 419 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chrX-5118 chrX 129004752 129004962 + 8.48 0.000 Intergenic Intergenic 518633 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr7-7692 chr7 156143553 156143763 + 8.48 0.000 Intergenic Intergenic 181026 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr4-3115 chr4 166227341 166227551 + 8.48 0.000 Intergenic MER52A|LTR|ERV1 354209 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr3-8805 chr3 6732083 6732293 + 8.48 0.000 intron (NR_110125, intron 3 of 3) intron (NR_110125, intron 3 of 3) 73261 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr13-3760 chr13 43348350 43348560 + 8.48 0.000 intron (NM_001347966, intron 9 of 17) Tigger7|DNA|TcMar-Tigger -100397 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr17-3046 chr17 79911850 79912060 + 8.48 0.000 Intergenic Intergenic -7402 NR_110851 101928738 Hs.399280 NR_110851 ENSG00000262188 LINC01978 - long intergenic non-protein coding RNA 1978 ncRNA chr15-4380 chr15 42373992 42374202 + 8.48 0.000 intron (NM_000070, intron 1 of 23) intron (NM_000070, intron 1 of 23) 14596 NM_000070 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr12-3831 chr12 83880337 83880547 + 8.48 0.000 Intergenic AluSx3|SINE|Alu 1032357 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr22-2857 chr22 44791109 44791319 + 8.48 0.000 intron (NM_181335, intron 2 of 11) intron (NM_181335, intron 2 of 11) 38656 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr15-3853 chr15 85923138 85923348 + 8.48 0.000 Intergenic Intergenic 97608 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr8-6057 chr8 25053749 25053959 + 8.48 0.000 Intergenic Intergenic -96985 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr19-3155 chr19 34722532 34722742 + 8.48 0.000 Intergenic HERVS71-int|LTR|ERV1 -11606 NM_001145665 339318 Hs.720472 NM_001029997 ENSG00000197841 ZNF181 HHZ181 zinc finger protein 181 protein-coding chr11-6702 chr11 78224555 78224765 + 8.48 0.000 intron (NM_012296, intron 5 of 9) intron (NM_012296, intron 5 of 9) 35741 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr1-8443 chr1 99963250 99963460 + 8.48 0.000 Intergenic MLT1I-int|LTR|ERVL-MaLR -6641 NM_001271684 23443 Hs.448979 NM_012243 ENSG00000117620 SLC35A3 AMRS solute carrier family 35 member A3 protein-coding chr3-8723 chr3 193693255 193693465 + 8.48 0.000 intron (NM_130831, intron 27 of 27) AluSz|SINE|Alu -66028 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA chr7-8567 chr7 62859607 62859817 + 8.48 0.000 Intergenic L1PA2|LINE|L1 444344 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr8-6793 chr8 95150819 95151029 + 8.48 0.000 intron (NM_024613, intron 1 of 1) MIR|SINE|MIR 17139 NM_024613 79666 Hs.29724 NM_024613 ENSG00000175895 PLEKHF2 EAPF|PHAFIN2|ZFYVE18 pleckstrin homology and FYVE domain containing 2 protein-coding chr3-6604 chr3 126256758 126256968 + 8.48 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -75677 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr8-6678 chr8 80865911 80866121 + 8.48 0.000 intron (NM_001033723, intron 1 of 8) intron (NM_001033723, intron 1 of 8) 8452 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr3-4843 chr3 150577695 150577905 + 8.48 0.000 intron (NM_001319043, intron 10 of 12) intron (NM_001319043, intron 10 of 12) -25521 NM_016275 51714 Hs.369052 NM_016275 ENSG00000198843 SELENOT SELT selenoprotein T protein-coding chr10-8289 chr10 77213877 77214087 + 8.48 0.000 intron (NM_001271519, intron 3 of 28) L2|LINE|L2 73151 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr7-6689 chr7 380036 380246 + 8.48 0.000 intron (NR_033960, intron 1 of 2) intron (NR_033960, intron 1 of 2) 716 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr2-8182 chr2 87852953 87853163 + 8.48 0.000 intron (NM_001024457, intron 1 of 22).2 intron (NM_001024457, intron 1 of 22).2 -27291 NM_001078170 729857 Hs.652430 NM_001078170 ENSG00000185304 RGPD2 NUP358|RANBP2L2|RGP2 RANBP2 like and GRIP domain containing 2 protein-coding chr19-1824 chr19 4236458 4236668 + 8.48 0.000 intron (NM_005755, intron 4 of 4) intron (NM_005755, intron 4 of 4) 7040 NM_005755 10148 Hs.501452 NM_005755 ENSG00000105246 EBI3 IL-27B|IL27B|IL35B Epstein-Barr virus induced 3 protein-coding chr11-10419 chr11 115555827 115556037 + 8.48 0.000 Intergenic Intergenic -51517 NM_014333 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr2-8416 chr2 118363965 118364175 + 8.48 0.000 Intergenic L1MB4|LINE|L1 -177684 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr17-3950 chr17 62572616 62572826 + 8.48 0.000 intron (NM_001284363, intron 9 of 19) intron (NM_001284363, intron 9 of 19) -54949 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr4-6309 chr4 86175328 86175538 + 8.48 0.000 intron (NM_001318069, intron 3 of 13) MSTA|LTR|ERVL-MaLR 55627 NR_110879 101929064 Hs.662221 NR_110879 ENSG00000250062 LOC101929064 - uncharacterized LOC101929064 ncRNA chr11-4056 chr11 15114848 15115058 + 8.48 0.000 promoter-TSS (NM_001042536) promoter-TSS (NM_001042536) 30 NM_001042536 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr2-12406 chr2 55309524 55309734 + 8.48 0.000 intron (NM_001254943, intron 23 of 33) intron (NM_001254943, intron 23 of 33) 27310 NR_027258 344405 Hs.445292 NM_001080459 ENSG00000162997 PRORSD1P NCRNA00117|PRDXDD1P|Prdxdd1|Ybakd1 prolyl-tRNA synthetase associated domain containing 1, pseudogene pseudo chrX-4190 chrX 34909207 34909417 + 8.48 0.000 Intergenic L1MA2|LINE|L1 -33484 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr10-5601 chr10 93554878 93555088 + 8.48 0.000 Intergenic Intergenic -11682 NM_001195755 338557 Hs.661022 NM_181745 ENSG00000186188 FFAR4 BMIQ10|GPR120|GPR129|GT01|O3FAR1|PGR4 free fatty acid receptor 4 protein-coding chr15-4633 chr15 63013488 63013698 + 8.48 0.000 Intergenic Intergenic -29154 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr16-4373 chr16 48393915 48394125 + 8.48 0.000 Intergenic Intergenic -8607 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr3-9104 chr3 28789903 28790113 + 8.48 0.000 Intergenic Intergenic 214730 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr22-2432 chr22 19709965 19710175 + 8.48 0.000 Intergenic Intergenic -4433 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding chr9-5269 chr9 80995853 80996063 + 8.48 0.000 Intergenic LTR3B_|LTR|ERVK 693577 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr5-2734 chr5 132936102 132936312 + 8.48 0.000 intron (NM_014423, intron 2 of 20) AluYm1|SINE|Alu 27427 NM_014423 27125 Hs.519313 NM_014423 ENSG00000072364 AFF4 AF5Q31|CHOPS|MCEF AF4/FMR2 family member 4 protein-coding chr3-6993 chr3 169807673 169807883 + 8.48 0.000 intron (NM_001172780, intron 2 of 8) intron (NM_001172780, intron 2 of 8) 5126 NM_001363888 151827 Hs.591289 NM_153353 ENSG00000171757 LRRC34 - leucine rich repeat containing 34 protein-coding chr19-3893 chr19 39493027 39493237 + 8.48 0.000 3' UTR (NM_001329559, exon 10 of 10) 3' UTR (NM_001329559, exon 10 of 10) -5815 NM_203486 10683 Hs.127792 NM_016941 ENSG00000090932 DLL3 SCDO1 delta like canonical Notch ligand 3 protein-coding chr9-3538 chr9 36559221 36559431 + 8.48 0.000 Intergenic MER41A|LTR|ERV1 -13536 NM_001256691 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr4-8661 chr4 178294445 178294655 + 8.48 0.000 Intergenic Intergenic -386614 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr15-3117 chr15 65222360 65222570 + 8.48 0.000 Intergenic Intergenic -10992 NM_003613 8483 Hs.442180 NM_003613 ENSG00000138615 CILP CILP-1|HsT18872 cartilage intermediate layer protein protein-coding chr1-11011 chr1 220485163 220485373 + 8.48 0.000 Intergenic Intergenic -42868 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr22-2653 chr22 35971050 35971260 + 8.48 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) -9525 NM_001349992 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr5-5156 chr5 108484610 108484820 + 8.48 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -102617 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr17-8513 chr17 79132749 79132959 + 8.48 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 57917 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr19-4815 chr19 35434401 35434611 + 8.48 0.000 Intergenic Intergenic -13751 NM_005306 2867 Hs.248056 NM_005306 ENSG00000126262 FFAR2 FFA2R|GPR43 free fatty acid receptor 2 protein-coding chr17-3047 chr17 79946660 79946870 + 8.48 0.000 intron (NM_001271846, intron 5 of 6) intron (NM_001271846, intron 5 of 6) 4088 NM_001271845 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chrX-2934 chrX 153540833 153541043 + 8.48 0.000 intron (NM_001001344, intron 1 of 19) intron (NM_001001344, intron 1 of 19) 4816 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr5-9095 chr5 172578085 172578295 + 8.48 0.000 Intergenic Intergenic -19176 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr17-6917 chr17 39727406 39727616 + 8.48 0.000 TTS (NM_032339) TTS (NM_032339) 1016 NR_039881 100616132 NR_039881 ENSG00000265178 MIR4728 - microRNA 4728 ncRNA chr6-3054 chr6 65159008 65159218 + 8.48 0.000 intron (NM_001292009, intron 12 of 43) HAL1|LINE|L1 -142305 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr10-5846 chr10 113561260 113561470 + 8.48 0.000 intron (NM_004132, intron 1 of 12) intron (NM_004132, intron 1 of 12) 8312 NM_004132 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr15-3191 chr15 70611146 70611356 + 8.48 0.000 Intergenic Intergenic -4296 NR_126481 104548972 NR_126481 ENSG00000281264 SALRNA3 SAL-RNA3|XLOC_025918 senescence associated long non-coding RNA 3 ncRNA chr12-3740 chr12 30807427 30807637 + 8.48 0.000 Intergenic L1M3f|LINE|L1 11851 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr19-4643 chr19 15400844 15401054 + 8.48 0.000 non-coding (NR_111971, exon 7 of 16) non-coding (NR_111971, exon 7 of 16) 18039 NR_111971 26993 Hs.399800 NM_014371 ENSG00000011243 AKAP8L HA95|HAP95|NAKAP|NAKAP95 A-kinase anchoring protein 8 like protein-coding chr8-2754 chr8 110344439 110344649 + 8.48 0.000 Intergenic Intergenic -368773 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr6-3283 chr6 156866224 156866434 + 8.48 0.000 intron (NM_017519, intron 2 of 18) HAL1|LINE|L1 -86598 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr9-8175 chr9 105992149 105992359 + 8.48 0.000 Intergenic Intergenic 297713 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr2-3410 chr2 46780924 46781134 + 8.48 0.000 Intergenic Intergenic -35639 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr3-4588 chr3 185540684 185540894 + 8.48 0.000 intron (NM_139248, intron 1 of 9) intron (NM_139248, intron 1 of 9) 11799 NM_139248 200879 Hs.68864 NM_139248 ENSG00000163898 LIPH AH|ARWH2|HYPT7|LAH2|LPDLR|PLA1B|mPA-PLA1 lipase H protein-coding chr2-13860 chr2 178092415 178092625 + 8.48 0.000 intron (NM_001077197, intron 2 of 20) intron (NM_001077197, intron 2 of 20) 15819 NM_001077197 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr2-7566 chr2 24439902 24440112 + 8.48 0.000 Intergenic L1MCb|LINE|L1 -51247 NM_003743 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr22-2286 chr22 35996709 35996919 + 8.48 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) 31723 NM_001082579 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr17-6878 chr17 29819171 29819381 + 8.48 0.000 intron (NM_033389, intron 1 of 14) intron (NM_033389, intron 1 of 14) -57844 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr18-2136 chr18 55339358 55339568 + 8.48 0.000 intron (NM_001243228, intron 8 of 19) intron (NM_001243228, intron 8 of 19) -17622 NM_001243234 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr11-4730 chr11 72883916 72884126 + 8.48 0.000 intron (NM_014824, intron 12 of 19) intron (NM_014824, intron 12 of 19) 69610 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr11-6029 chr11 26105766 26105976 + 8.48 0.000 Intergenic L1PA16|LINE|L1 -83252 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr11-6280 chr11 59669873 59670083 + 8.48 0.000 promoter-TSS (NM_152716) promoter-TSS (NM_152716) -941 NM_152716 219988 Hs.591960 NM_152716 ENSG00000166889 PATL1 Pat1b|hPat1b PAT1 homolog 1, processing body mRNA decay factor protein-coding chr11-9370 chr11 48350136 48350346 + 8.48 0.000 Intergenic L1PA4|LINE|L1 16247 NM_001348223 79346 NM_001348223 ENSG00000176540 OR4C5 OR4C5P|OR4C5Q olfactory receptor family 4 subfamily C member 5 (gene/pseudogene) protein-coding chr3-9372 chr3 47082108 47082318 + 8.48 0.000 intron (NR_146158, intron 12 of 21) intron (NR_146158, intron 12 of 21) 70671 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr21-1691 chr21 29464741 29464951 + 8.48 0.000 Intergenic Intergenic -31201 NR_146594 54147 Hs.124532 NR_146594 ENSG00000234293 BACH1-IT3 C21orf8|NCRNA00097 BACH1 intronic transcript 3 ncRNA chr22-2618 chr22 32584648 32584858 + 8.48 0.000 intron (NM_003490, intron 7 of 13) intron (NM_003490, intron 7 of 13) 109516 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr7-2949 chr7 151190848 151191058 + 8.48 0.000 TTS (NM_001304419) TTS (NM_001304419) -3161 NM_080871 136371 Hs.647081 NM_080871 ENSG00000146926 ASB10 GLC1F ankyrin repeat and SOCS box containing 10 protein-coding chr2-6436 chr2 150954102 150954312 + 8.48 0.000 Intergenic HERVH-int|LTR|ERV1 307656 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr11-4473 chr11 107041115 107041325 + 8.48 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger -22744 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr2-10459 chr2 215432109 215432319 + 8.48 0.000 intron (NM_212482, intron 3 of 45) intron (NM_212482, intron 3 of 45) 3854 NM_001365519 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr10-3210 chr10 101006948 101007158 + 8.48 0.000 TTS (NM_001195263) TTS (NM_001195263) 4556 NM_001318101 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr11-7825 chr11 110430796 110431006 + 8.48 0.000 intron (NM_004109, intron 1 of 3) MIR|SINE|MIR 953 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chr14-5047 chr14 81164163 81164373 + 8.48 0.000 Intergenic Intergenic 38566 NR_003021 677845 Hs.693251 NR_003021 ENSG00000221303 SNORA79 ACA65|SNORA79A small nucleolar RNA, H/ACA box 79 snoRNA chr4-3451 chr4 95528513 95528723 + 8.48 0.000 intron (NM_003728, intron 1 of 15) intron (NM_003728, intron 1 of 15) 20355 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr2-8018 chr2 69643215 69643425 + 8.48 0.000 promoter-TSS (NM_001320698) promoter-TSS (NM_001320698) 419 NM_014911 22848 Hs.468878 NM_014911 ENSG00000115977 AAK1 - AP2 associated kinase 1 protein-coding chr5-5556 chr5 148471341 148471551 + 8.48 0.000 intron (NM_199453, intron 5 of 6) intron (NM_199453, intron 5 of 6) 87488 NM_205836 81545 Hs.483772 NM_030793 ENSG00000145868 FBXO38 Fbx38|HMN2D|MOKA|SP329 F-box protein 38 protein-coding chr9-7007 chr9 114746818 114747028 + 8.48 0.000 Intergenic Intergenic 45607 NM_001204344 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr3-9040 chr3 22864045 22864255 + 8.48 0.000 Intergenic L2a|LINE|L2 338428 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr19-4973 chr19 45683311 45683521 + 8.48 0.000 3' UTR (NM_000164, exon 14 of 14) 3' UTR (NM_000164, exon 14 of 14) -8408 NR_037512 100500845 NR_037512 ENSG00000283212 MIR642B mir-642b microRNA 642b ncRNA chr10-8586 chr10 96262692 96262902 + 8.48 0.000 intron (NM_013314, intron 1 of 16) intron (NM_013314, intron 1 of 16) 8719 NM_001258442 29760 Hs.665244 NM_013314 ENSG00000095585 BLNK AGM4|BASH|BLNK-S|LY57|SLP-65|SLP65|bca B cell linker protein-coding chr7-2500 chr7 28179538 28179748 + 8.48 0.000 promoter-TSS (NR_034097) promoter-TSS (NR_034097) -814 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr9-3533 chr9 35757515 35757725 + 8.48 0.000 3' UTR (NM_001080496, exon 9 of 9) 3' UTR (NM_001080496, exon 9 of 9) -3344 NM_001044264 692094 Hs.571601 NM_001044264 ENSG00000215183 MSMP PSMP microseminoprotein, prostate associated protein-coding chr18-844 chr18 22267885 22268095 + 8.48 0.000 Intergenic Intergenic 98553 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr12-3658 chr12 114142026 114142236 + 8.48 0.000 Intergenic Intergenic 99639 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr6-4414 chr6 27478653 27478863 + 8.48 0.000 Intergenic Intergenic -5640 NM_007149 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding chr4-6644 chr4 1974703 1974913 + 8.48 0.000 TTS (NR_003004) TTS (NR_003004) 172 NR_003004 677770 Hs.676951 NR_003004 ENSG00000249784 SCARNA22 ACA11 small Cajal body-specific RNA 22 ncRNA chrX-3884 chrX 6013655 6013865 + 8.48 0.000 intron (NM_001282145, intron 4 of 6) AluJb|SINE|Alu -212598 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr9-5197 chr9 72439068 72439278 + 8.48 0.000 Intergenic Intergenic -73965 NM_001102420 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chrX-3555 chrX 67725483 67725693 + 8.48 0.000 3' UTR (NM_000044, exon 8 of 8) 3' UTR (NM_000044, exon 8 of 8) 180965 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr1-10568 chr1 174109792 174110002 + 8.48 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 49390 NR_121197 102724601 Hs.563791 NR_121197 ENSG00000227373 RABGAP1L-DT - RABGAP1L divergent transcript ncRNA chr4-8639 chr4 174723176 174723386 + 8.48 0.000 intron (NM_006529, intron 4 of 9) Charlie24|DNA|hAT-Charlie 105966 NM_006529 8001 Hs.413099 NM_006529 ENSG00000145451 GLRA3 - glycine receptor alpha 3 protein-coding chr6-5214 chr6 133945255 133945465 + 8.48 0.000 Intergenic LTR41|LTR|ERVL -6810 NM_001253676 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr15-2734 chr15 98788451 98788661 + 8.48 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 4130 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr12-2093 chr12 47726037 47726247 + 8.48 0.000 promoter-TSS (NM_001172439) promoter-TSS (NM_001172439) -652 NM_001172440 8909 Hs.997 NM_006025 ENSG00000111405 ENDOU P11|PP11|PRSS26 endonuclease, poly(U) specific protein-coding chr2-6672 chr2 14462297 14462507 + 8.48 0.000 Intergenic L1ME3|LINE|L1 -61444 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr3-10171 chr3 117184671 117184881 + 8.48 0.000 Intergenic Intergenic 263345 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr2-9391 chr2 231008897 231009107 + 8.48 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 12878 NM_139073 130560 Hs.745178 NM_139073 ENSG00000173699 SPATA3 TSARG1 spermatogenesis associated 3 protein-coding chr17-7356 chr17 6832604 6832814 + 8.48 0.000 promoter-TSS (NM_053285) promoter-TSS (NM_053285) -980 NM_053285 83659 Hs.462108 NM_053285 ENSG00000167858 TEKT1 - tektin 1 protein-coding chr14-3390 chr14 95015069 95015279 + 8.48 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 118329 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr13-2255 chr13 26508945 26509155 + 8.48 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -48633 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr3-5165 chr3 60948543 60948753 + 8.48 0.000 intron (NR_148922, intron 3 of 3) intron (NR_148922, intron 3 of 3) 302804 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr9-5347 chr9 89497623 89497833 + 8.48 0.000 intron (NM_001371194, intron 1 of 15) intron (NM_001371194, intron 1 of 15) 245 NM_001371194 chr5-6666 chr5 57069354 57069564 + 8.48 0.000 Intergenic LTR10A|LTR|ERV1 -104489 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr1-13001 chr1 158728926 158729136 + 8.48 0.000 Intergenic Intergenic -10916 NM_001005327 391114 Hs.554488 NM_001005327 ENSG00000203757 OR6K3 OR1-18 olfactory receptor family 6 subfamily K member 3 protein-coding chr10-7518 chr10 13560590 13560800 + 8.48 0.000 Intergenic Intergenic -26270 NM_003675 8559 Hs.660649 NM_003675 ENSG00000165630 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding chr14-2797 chr14 21738384 21738594 + 8.48 0.000 Intergenic Intergenic -67472 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr10-6338 chr10 122276889 122277099 + 8.48 0.000 intron (NM_001318189, intron 3 of 15) intron (NM_001318189, intron 3 of 15) 5698 NM_144587 118663 Hs.422466 NM_144587 ENSG00000138152 BTBD16 C10orf87 BTB domain containing 16 protein-coding chr8-6858 chr8 100027142 100027352 + 8.48 0.000 intron (NM_015668, intron 14 of 27) intron (NM_015668, intron 14 of 27) 22665 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr7-5921 chr7 98853071 98853281 + 8.48 0.000 intron (NM_152913, intron 5 of 7) intron (NM_152913, intron 5 of 7) 16838 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr5-9045 chr5 169757197 169757407 + 8.48 0.000 intron (NR_156756, intron 23 of 52) MER103C|DNA|hAT-Charlie 120027 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr2-10401 chr2 185736785 185736995 + 8.48 0.000 intron (NR_110214, intron 1 of 3) MLT1D|LTR|ERVL-MaLR 1829 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr1-4016 chr1 178126758 178126968 + 8.48 0.000 intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) 32759 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr17-5477 chr17 40665864 40666074 + 8.48 0.000 promoter-TSS (NM_152349) promoter-TSS (NM_152349) -792 NM_152349 125113 Hs.6920 NM_152349 ENSG00000213424 KRT222 KA21|KRT222P keratin 222 protein-coding chr18-2637 chr18 40473479 40473689 + 8.48 0.000 Intergenic Intergenic 407298 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr3-7377 chr3 66706178 66706388 + 8.48 0.000 Intergenic THE1B|LTR|ERVL-MaLR 32053 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr13-4305 chr13 99876982 99877192 + 8.48 0.000 intron (NR_104592, intron 7 of 9) intron (NR_104592, intron 7 of 9) 80078 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr20-3318 chr20 17599934 17600144 + 8.48 0.000 intron (NM_001011546, intron 2 of 4) intron (NM_001011546, intron 2 of 4) 29964 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr19-4781 chr19 33236625 33236835 + 8.48 0.000 Intergenic Intergenic -10880 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr3-4318 chr3 172103789 172103999 + 8.48 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 63363 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr21-1025 chr21 21309538 21309748 + 8.48 0.000 intron (NM_001352592, intron 6 of 18) L1ME1|LINE|L1 162481 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr5-4278 chr5 144627367 144627577 + 8.48 0.000 Intergenic L1PA4|LINE|L1 422081 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr12-5191 chr12 104951933 104952143 + 8.48 0.000 intron (NM_001352169, intron 1 of 11) intron (NM_001352169, intron 1 of 11) 6252 NM_001352172 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chrX-2473 chrX 86237506 86237716 + 8.48 0.000 intron (NM_001139514, intron 1 of 11) MER52A|LTR|ERV1 -25357 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chrX-3636 chrX 95926652 95926862 + 8.48 0.000 Intergenic L1PA7|LINE|L1 411145 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr2-10194 chr2 97092192 97092402 + 8.48 0.000 intron (NM_001320848, intron 1 of 8) intron (NM_001320848, intron 1 of 8) 2585 NM_001320848 151313 Hs.567723 NM_199336 ENSG00000144199 FAHD2B - fumarylacetoacetate hydrolase domain containing 2B protein-coding chr2-13046 chr2 109084561 109084771 + 8.48 0.000 Intergenic L3|LINE|CR1 -44539 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr18-3111 chr18 36467729 36467939 + 8.48 0.000 intron (NM_001281740, intron 3 of 28) intron (NM_001281740, intron 3 of 28) 170121 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr17-5737 chr17 58325525 58325735 + 8.48 0.000 exon (NM_001261835, exon 4 of 32) exon (NM_001261835, exon 4 of 32) 180 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr3-9166 chr3 33717558 33717768 + 8.48 0.000 intron (NM_001365634, intron 1 of 35) AluSg|SINE|Alu 591 NM_001365632 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr19-4273 chr19 456319 456529 + 8.48 0.000 intron (NM_012435, intron 1 of 12) intron (NM_012435, intron 1 of 12) 4572 NM_012435 25759 Hs.30965 NM_012435 ENSG00000129946 SHC2 SCK|SHCB|SLI SHC adaptor protein 2 protein-coding chr16-6288 chr16 31769543 31769753 + 8.48 0.000 Intergenic Intergenic 39205 NM_174980 317702 Hs.257746 NM_174980 VN1R3 FKSG46|V1RL3|V1RL3p vomeronasal 1 receptor 3 (gene/pseudogene) protein-coding chr13-1408 chr13 27740186 27740396 + 8.48 0.000 Intergenic MamGyp-int|LTR|Gypsy -52192 NM_145657 219409 Hs.351785 NM_145657 ENSG00000169840 GSX1 GSH1|Gsh-1 GS homeobox 1 protein-coding chr20-3607 chr20 5559956 5560166 + 8.48 0.000 exon (NM_019593, exon 17 of 20) exon (NM_019593, exon 17 of 20) -50059 NR_109860 101929207 Hs.516871 NR_109860 ENSG00000225640 LINC01729 - long intergenic non-protein coding RNA 1729 ncRNA chr13-2564 chr13 66695211 66695421 + 8.48 0.000 intron (NM_020403, intron 2 of 3) intron (NM_020403, intron 2 of 3) -129853 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr8-7344 chr8 134637190 134637400 + 8.48 0.000 intron (NM_020863, intron 3 of 15) intron (NM_020863, intron 3 of 15) 39224 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr5-3962 chr5 8392138 8392348 + 8.48 0.000 intron (NR_039984, intron 2 of 5) intron (NR_039984, intron 2 of 5) 65321 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr4-5177 chr4 157976017 157976227 + 8.48 0.000 Intergenic Intergenic -194630 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr22-1892 chr22 44892568 44892778 + 8.48 0.000 intron (NR_134535, intron 7 of 11) intron (NR_134535, intron 7 of 11) 110946 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr11-9854 chr11 72761042 72761252 + 8.48 0.000 intron (NM_006645, intron 2 of 6) L1MC5a|LINE|L1 -8758 NM_001040118 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr5-4608 chr5 31690434 31690644 + 8.48 0.000 intron (NM_178140, intron 1 of 24) MLT1D|LTR|ERVL-MaLR 51408 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr7-6020 chr7 106357205 106357415 + 8.48 0.000 Intergenic Intergenic -72327 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr5-2079 chr5 172695489 172695699 + 8.48 0.000 Intergenic Intergenic 33429 NR_049799 100847029 NR_049799 ENSG00000265160 MIR5003 - microRNA 5003 ncRNA chr6-6109 chr6 153142581 153142791 + 8.48 0.000 Intergenic Intergenic -11404 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr5-7226 chr5 9429540 9429750 + 8.48 0.000 intron (NM_003966, intron 2 of 22) L2a|LINE|L2 -81688 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr5-8970 chr5 161106160 161106370 + 8.48 0.000 Intergenic Intergenic -167639 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr22-2260 chr22 29907948 29908158 + 8.48 0.000 intron (NM_153051, intron 1 of 18) intron (NM_153051, intron 1 of 18) 24879 NM_153051 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding chr2-13100 chr2 112881544 112881754 + 8.48 0.000 Intergenic MIRb|SINE|MIR -31322 NM_014439 27178 Hs.166371 NM_014439 ENSG00000125571 IL37 FIL1|FIL1(ZETA)|FIL1Z|IL-1F7|IL-1H|IL-1H4|IL-1RP1|IL-37|IL1F7|IL1H4|IL1RP1 interleukin 37 protein-coding chr6-8398 chr6 150471023 150471233 + 8.48 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 102116 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr7-8170 chr7 30032755 30032965 + 8.48 0.000 intron (NM_001363473, intron 1 of 12) intron (NM_001363473, intron 1 of 12) 4448 NM_001363473 84725 Hs.233495 NM_032639 ENSG00000106086 PLEKHA8 FAPP2 pleckstrin homology domain containing A8 protein-coding chr9-3023 chr9 124770709 124770919 + 8.48 0.000 intron (NM_001278546, intron 1 of 9) CpG 497 NM_001489 2649 Hs.20131 NM_001489 ENSG00000148200 NR6A1 CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR nuclear receptor subfamily 6 group A member 1 protein-coding chr9-3639 chr9 92536049 92536259 + 8.48 0.000 promoter-TSS (NM_001393) promoter-TSS (NM_001393) -62 NM_001197295 1842 Hs.117060 NM_001393 ENSG00000106823 ECM2 - extracellular matrix protein 2 protein-coding chr8-6863 chr8 100273209 100273419 + 8.48 0.000 intron (NM_001353837, intron 3 of 9) MARNA|DNA|TcMar-Mariner 28879 NM_001353837 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr15-4468 chr15 48682974 48683184 + 8.48 0.000 Intergenic L1MA3|LINE|L1 -37291 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr6-6201 chr6 13844495 13844705 + 8.48 0.000 Intergenic Intergenic -30040 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr4-4536 chr4 69873060 69873270 + 8.48 0.000 Intergenic MER4A1|LTR|ERV1 -13020 NM_005420 6783 Hs.479898 NM_005420 ENSG00000109193 SULT1E1 EST|EST-1|ST1E1|STE sulfotransferase family 1E member 1 protein-coding chr6-5399 chr6 154932820 154933030 + 8.48 0.000 Intergenic Intergenic 79565 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C - microRNA 1273c ncRNA chr4-1930 chr4 85828464 85828674 + 8.48 0.000 intron (NM_001287805, intron 1 of 7) intron (NM_001287805, intron 1 of 7) 632 NM_001287805 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr5-6198 chr5 63207613 63207823 + 8.48 0.000 Intergenic L1MEa|LINE|L1 628899 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr11-7469 chr11 257204 257414 + 8.48 0.000 Intergenic Intergenic 20333 NM_002817 5719 Hs.134688 NM_002817 ENSG00000185627 PSMD13 HSPC027|Rpn9|S11|p40.5 proteasome 26S subunit, non-ATPase 13 protein-coding chr1-9672 chr1 48966308 48966518 + 8.48 0.000 intron (NM_001323575, intron 5 of 12) intron (NM_001323575, intron 5 of 12) -189444 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr15-4973 chr15 79332845 79333055 + 8.48 0.000 intron (NM_001330376, intron 2 of 2) L4_B_Mam|LINE|RTE-X 21838 NM_001301203 23423 Hs.71608 NM_007364 ENSG00000166557 TMED3 C15orf22|P24B|p24g4|p24gamma4|p26 transmembrane p24 trafficking protein 3 protein-coding chr3-6446 chr3 105034932 105035142 + 8.48 0.000 Intergenic MER50|LTR|ERV1 -331676 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr7-5260 chr7 19799162 19799372 + 8.48 0.000 Intergenic Intergenic -25650 NM_001366626 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding chr10-7101 chr10 96013128 96013338 + 8.48 0.000 intron (NM_001349008, intron 28 of 34) intron (NM_001349008, intron 28 of 34) 13142 NM_001001732 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr20-2431 chr20 23998749 23998959 + 8.48 0.000 Intergenic Intergenic -10075 NM_178311 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr5-3449 chr5 159553002 159553212 + 8.48 0.000 Intergenic Intergenic -86831 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr10-8349 chr10 80046893 80047103 + 8.48 0.000 non-coding (NR_027428, exon 6 of 6) non-coding (NR_027428, exon 6 of 6) -31648 NM_001270372 80195 Hs.169982 NM_025125 ENSG00000133678 TMEM254 C10orf57|bA369J21.6 transmembrane protein 254 protein-coding chr4-7106 chr4 34191905 34192115 + 8.48 0.000 intron (NR_147184, intron 2 of 3) MER70B|LTR|ERVL 77737 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chrX-2639 chrX 111129560 111129770 + 8.48 0.000 TTS (NR_136740) TTS (NR_136740) 6588 NM_001128172 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr1-8892 chr1 5909022 5909232 + 8.48 0.000 intron (NR_111987, intron 12 of 32) intron (NR_111987, intron 12 of 32) -46386 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr8-7039 chr8 112806867 112807077 + 8.48 0.000 intron (NM_001363185, intron 10 of 66) LTR35|LTR|ERV1 163479 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr4-7671 chr4 87045165 87045375 + 8.48 0.000 intron (NM_001313960, intron 1 of 17) intron (NM_001313960, intron 1 of 17) 38269 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr7-4004 chr7 140450841 140451051 + 8.48 0.000 Intergenic AluSc|SINE|Alu 28559 NM_013446 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chrX-3575 chrX 73729883 73730093 + 8.48 0.000 Intergenic Intergenic -62217 NR_003255 9383 Hs.529901 NR_003255 ENSG00000270641 TSIX LINC00013|NCRNA00013|XIST-AS|XIST-AS1|XISTAS TSIX transcript, XIST antisense RNA ncRNA chr2-9922 chr2 236520157 236520367 + 8.48 0.000 Intergenic L1ME3A|LINE|L1 -12727 NM_001270584 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr6-4765 chr6 73332547 73332757 + 8.48 0.000 Intergenic LTR78|LTR|ERV1 21624 NM_001025290 340168 Hs.125331 NM_001025290 ENSG00000203909 DPPA5 ESG1 developmental pluripotency associated 5 protein-coding chr3-9741 chr3 68751549 68751759 + 8.48 0.000 intron (NM_001005527, intron 4 of 5) MER46C|DNA|TcMar-Tigger 180893 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr11-5116 chr11 124402511 124402721 + 8.48 0.000 Intergenic Intergenic -5265 NM_001005467 390271 Hs.690456 NM_001005467 ENSG00000284609 OR8B3 OR11-311 olfactory receptor family 8 subfamily B member 3 protein-coding chr7-6376 chr7 151240665 151240875 + 8.48 0.000 intron (NM_001003801, intron 8 of 12) MIR|SINE|MIR 2349 NR_030407 768213 NR_030407 ENSG00000284191 MIR671 MIRN671|hsa-mir-671|mir-671 microRNA 671 ncRNA chr9-8954 chr9 137749604 137749814 + 8.48 0.000 intron (NM_001354263, intron 6 of 26) intron (NM_001354263, intron 6 of 26) 38697 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr6-3519 chr6 36510659 36510869 + 8.48 0.000 intron (NM_007271, intron 7 of 13) intron (NM_007271, intron 7 of 13) 36715 NM_001305102 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr1-8207 chr1 24498906 24499116 + 8.48 0.000 intron (NR_144360, intron 1 of 1) L2|LINE|L2 -3333 NM_001251979 11123 Hs.656799 NM_013441 ENSG00000117602 RCAN3 DSCR1L2|MCIP3|RCN3|hRCN3 RCAN family member 3 protein-coding chr10-6291 chr10 98474503 98474713 + 8.48 0.000 intron (NM_001166246, intron 11 of 12) intron (NM_001166246, intron 11 of 12) -27645 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr12-7791 chr12 97321821 97322031 + 8.48 0.000 Intergenic Intergenic -140850 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr9-4848 chr9 673615 673825 + 8.48 0.000 intron (NM_001256877, intron 2 of 12) intron (NM_001256877, intron 2 of 12) -13047 NM_001354335 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr3-10319 chr3 126906491 126906701 + 8.48 0.000 intron (NM_032343, intron 5 of 7) intron (NM_032343, intron 5 of 7) -81998 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr14-4531 chr14 40727347 40727557 + 8.48 0.000 Intergenic L1MA2|LINE|L1 -227259 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr19-4252 chr19 55361911 55362121 + 8.48 0.000 intron (NM_001145402, intron 3 of 10) MSR1|Satellite|Satellite 1244 NM_001145402 284418 Hs.528319 NM_001145402 ENSG00000180043 FAM71E2 C19orf16 family with sequence similarity 71 member E2 protein-coding chr6-2188 chr6 36095285 36095495 + 8.48 0.000 intron (NM_001315, intron 8 of 11) intron (NM_001315, intron 8 of 11) -35123 NM_002754 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr13-1636 chr13 57582351 57582561 + 8.48 0.000 Intergenic L1P4a|LINE|L1 -49288 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr5-5422 chr5 136630103 136630313 + 8.48 0.000 Intergenic Intergenic -264732 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr7-7993 chr7 16007089 16007299 + 8.48 0.000 Intergenic Intergenic -203292 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr7-9168 chr7 113979898 113980108 + 8.48 0.000 Intergenic Intergenic -60994 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr20-1652 chr20 25000800 25001010 + 8.48 0.000 Intergenic AluJb|SINE|Alu -8154 NM_020531 57136 Hs.472330 NM_020531 ENSG00000101474 APMAP BSCv|C20orf3 adipocyte plasma membrane associated protein protein-coding chr20-2890 chr20 63096943 63097153 + 8.48 0.000 intron (NR_152601, intron 1 of 2) intron (NR_152601, intron 1 of 2) -4244 NR_003244 768096 Hs.549606 NR_003244 HAR1A HAR1F|LINC00064|NCRNA00064 highly accelerated region 1A ncRNA chr17-6504 chr17 29211372 29211582 + 8.48 0.000 Intergenic Intergenic -31079 NM_001346765 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr13-3029 chr13 23467425 23467635 + 8.48 0.000 Intergenic Intergenic -1982 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr3-6311 chr3 76592854 76593064 + 8.48 0.000 Intergenic L2a|LINE|L2 -447140 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr18-3112 chr18 36544344 36544554 + 8.48 0.000 intron (NM_001281740, intron 5 of 28) intron (NM_001281740, intron 5 of 28) 118969 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr16-4640 chr16 74042970 74043180 + 8.48 0.000 Intergenic L1MEd|LINE|L1 172446 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr2-10110 chr2 59777096 59777306 + 8.48 0.000 Intergenic Intergenic 559493 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr12-4564 chr12 28860731 28860941 + 8.48 0.000 Intergenic Intergenic -288442 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chrX-1063 chrX 129593530 129593740 + 8.48 0.000 Intergenic MIR3|SINE|MIR 53376 NM_001318784 4952 Hs.126357 NM_000276 ENSG00000122126 OCRL INPP5F|LOCR|NPHL2|OCRL-1|OCRL1 OCRL inositol polyphosphate-5-phosphatase protein-coding chr9-5157 chr9 38674291 38674501 + 8.48 0.000 Intergenic Intergenic 53308 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr2-13759 chr2 170573197 170573407 + 8.48 0.000 intron (NM_001083615, intron 31 of 33) intron (NM_001083615, intron 31 of 33) 141265 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr20-1116 chr20 11890778 11890988 + 8.48 0.000 exon (NM_181443, exon 1 of 5) exon (NM_181443, exon 1 of 5) 160 NM_001282552 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr14-4587 chr14 50318088 50318298 + 8.48 0.000 intron (NM_001370605, intron 2 of 5) intron (NM_001370605, intron 2 of 5) 5869 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr19-3884 chr19 35420271 35420481 + 8.48 0.000 Intergenic Intergenic 14769 NR_040046 100128682 Hs.570008 NR_040046 ENSG00000205786 LINC01531 - long intergenic non-protein coding RNA 1531 ncRNA chr7-6411 chr7 155568184 155568394 + 8.48 0.000 intron (NM_001369813, intron 1 of 4) intron (NM_001369813, intron 1 of 4) 2457 NM_001369813 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr5-3496 chr5 173457655 173457865 + 8.48 0.000 Intergenic MIRb|SINE|MIR 110305 NR_107023 102465862 NR_107023 ENSG00000274994 MIR8056 hsa-mir-8056 microRNA 8056 ncRNA chr19-5911 chr19 48509080 48509290 + 8.48 0.000 intron (NM_001080434, intron 5 of 15) (GACG)n|Simple_repeat|Simple_repeat 4004 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr3-4637 chr3 24548434 24548644 + 8.48 0.000 Intergenic Intergenic -52831 NM_001354708 7068 Hs.187861 NM_000461 ENSG00000151090 THRB C-ERBA-2|C-ERBA-BETA|ERBA2|GRTH|NR1A2|PRTH|THR1|THRB1|THRB2 thyroid hormone receptor beta protein-coding chr7-5580 chr7 47842621 47842831 + 8.48 0.000 intron (NM_138295, intron 34 of 56) intron (NM_138295, intron 34 of 56) 47435 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr19-4850 chr19 38395095 38395305 + 8.48 0.000 intron (NM_001042522, intron 4 of 4) intron (NM_001042522, intron 4 of 4) 4908 NR_073032 399473 Hs.196011 NM_001039616 ENSG00000188766 SPRED3 Eve-3|spred-3 sprouty related EVH1 domain containing 3 protein-coding chr12-8000 chr12 111901100 111901310 + 8.48 0.000 non-coding (NR_036636, exon 1 of 1) non-coding (NR_036636, exon 1 of 1) 2142 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo chr1-5171 chr1 168203421 168203631 + 8.48 0.000 Intergenic L1MCc|LINE|L1 -22478 NM_199344 375035 Hs.645435 NM_199344 ENSG00000213064 SFT2D2 UNQ512|dJ747L4.C1.2 SFT2 domain containing 2 protein-coding chr7-6343 chr7 148921284 148921494 + 8.48 0.000 Intergenic Intergenic -20099 NR_001571 6090 NR_001571 RNY5 Y5|hY5 RNA, Ro60-associated Y5 ncRNA chr1-9335 chr1 28198420 28198630 + 8.48 0.000 Intergenic AluY|SINE|Alu -4589 NM_001164721 5724 Hs.77542 NM_000952 ENSG00000169403 PTAFR PAFR platelet activating factor receptor protein-coding chr1-15959 chr1 191706225 191706435 + 8.48 0.000 Intergenic Intergenic -452132 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr10-4185 chr10 100085534 100085744 + 8.48 0.000 Intergenic Intergenic -3770 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chr14-1615 chr14 102230423 102230633 + 8.48 0.000 intron (NR_148552, intron 8 of 9) MER58B|DNA|hAT-Charlie 4898 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr19-5433 chr19 19275196 19275406 + 8.48 0.000 TTS (NM_172231) TTS (NM_172231) -2000 NM_001001524 53345 Hs.531624 NM_203510 ENSG00000213996 TM6SF2 - transmembrane 6 superfamily member 2 protein-coding chr2-7326 chr2 240931939 240932149 + 8.48 0.000 intron (NM_001351305, intron 7 of 31) intron (NM_001351305, intron 7 of 31) 25708 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr20-2090 chr20 22342675 22342885 + 8.48 0.000 Intergenic Intergenic -59979 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chr9-4413 chr9 1957123 1957333 + 8.48 0.000 Intergenic Intergenic -58119 NM_001289397 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr17-4441 chr17 44921436 44921646 + 8.48 0.000 Intergenic Intergenic -5989 NM_001363846 2670 Hs.514227 NM_002055 ENSG00000131095 GFAP ALXDRD glial fibrillary acidic protein protein-coding chr10-7724 chr10 31129431 31129641 + 8.48 0.000 Intergenic Intergenic -58347 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr7-6287 chr7 138876458 138876668 + 8.48 0.000 intron (NM_020910, intron 12 of 19) intron (NM_020910, intron 12 of 19) -78367 NM_020632 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr5-2267 chr5 34410888 34411098 + 8.48 0.000 Intergenic Intergenic -166269 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr3-4051 chr3 75631907 75632117 + 8.48 0.000 Intergenic Intergenic 1249 NR_031714 100302212 NR_031714 ENSG00000283894 MIR1324 MIRN1324|hsa-mir-1324 microRNA 1324 ncRNA chr2-7920 chr2 58587178 58587388 + 8.48 0.000 intron (NR_033873, intron 1 of 13) L1PA5|LINE|L1 66530 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr13-3651 chr13 31963064 31963274 + 8.48 0.000 Intergenic Intergenic 68470 NR_103839 100507099 Hs.536364 NR_103839 FRY-AS1 - FRY antisense RNA 1 ncRNA chr17-2865 chr17 31491010 31491220 + 8.48 0.000 intron (NM_001346748, intron 1 of 12) intron (NM_001346748, intron 1 of 12) 3007 NM_001303542 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr7-1525 chr7 74023113 74023323 + 8.48 0.000 Intergenic Intergenic -4571 NM_001278918 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr4-5001 chr4 138037862 138038072 + 8.48 0.000 intron (NR_037866, intron 8 of 10) MLT2F|LTR|ERVL -51047 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr8-4465 chr8 116636031 116636241 + 8.48 0.000 Intergenic Intergenic -15964 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr11-3238 chr11 72013322 72013532 + 8.48 0.000 promoter-TSS (NR_104178) promoter-TSS (NR_104178) -864 NR_104178 100128494 Hs.713607 NR_104178 ENSG00000251143 LOC100128494 - uncharacterized LOC100128494 ncRNA chr1-3688 chr1 167666590 167666800 + 8.48 0.000 intron (NM_001322923, intron 1 of 5) intron (NM_001322923, intron 1 of 5) 36463 NM_001322924 92241 Hs.493867 NM_052862 ENSG00000198771 RCSD1 CAPZIP|MK2S4 RCSD domain containing 1 protein-coding chr5-5307 chr5 126642088 126642298 + 8.48 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 10488 NM_207408 389320 Hs.177983 NM_207408 ENSG00000196900 TEX43 C5orf48|Tseg7 testis expressed 43 protein-coding chr7-3064 chr7 151104893 151105103 + 8.48 0.000 intron (NM_001350103, intron 1 of 18) intron (NM_001350103, intron 1 of 18) -9640 NM_001308305 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr7-5438 chr7 37716990 37717200 + 8.48 0.000 intron (NM_001329994, intron 3 of 3) intron (NM_001329994, intron 3 of 3) 33329 NM_001329994 353345 Hs.563492 NM_181791 ENSG00000187037 GPR141 PGR13 G protein-coupled receptor 141 protein-coding chr2-12905 chr2 99680478 99680688 + 8.48 0.000 intron (NM_001025108, intron 10 of 23) intron (NM_001025108, intron 10 of 23) -190566 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr5-3320 chr5 128559682 128559892 + 8.48 0.000 Intergenic Intergenic -21542 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr3-7921 chr3 143777740 143777950 + 8.48 0.000 intron (NM_173653, intron 4 of 15) AluSg|SINE|Alu 70623 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr3-10347 chr3 127644454 127644664 + 8.48 0.000 intron (NM_015720, intron 2 of 7) intron (NM_015720, intron 2 of 7) 15374 NM_015720 50512 Hs.591290 NM_015720 ENSG00000114631 PODXL2 EG|PODLX2 podocalyxin like 2 protein-coding chr16-3015 chr16 30637960 30638170 + 8.48 0.000 Intergenic MER20|DNA|hAT-Charlie -12713 NM_001320464 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 - proline rich 14 protein-coding chr16-2329 chr16 30053262 30053472 + 8.48 0.000 5' UTR (NM_001365305, exon 1 of 12) 5' UTR (NM_001365305, exon 1 of 12) 277 NM_001365305 112694756 Hs.513490 NM_001365304 LOC112694756 ALDA|ALDOA uncharaterized LOC112694756 protein-coding chr11-6967 chr11 114551815 114552025 + 8.48 0.000 intron (NM_001367953, intron 2 of 7) intron (NM_001367953, intron 2 of 7) 7961 NM_001367953 120400 Hs.550126 NM_152315 ENSG00000095110 NXPE1 FAM55A neurexophilin and PC-esterase domain family member 1 protein-coding chr17-3428 chr17 17182325 17182535 + 8.48 0.000 intron (NM_201274, intron 23 of 23) intron (NM_201274, intron 23 of 23) 23903 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr5-6967 chr5 143472087 143472297 + 8.48 0.000 Intergenic Intergenic -36680 NM_001018077 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr7-6751 chr7 8090028 8090238 + 8.48 0.000 Intergenic Intergenic 121337 NM_138426 113263 Hs.131673 NM_138426 ENSG00000106415 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced 1 protein-coding chr2-5900 chr2 241755284 241755494 + 8.48 0.000 intron (NM_152783, intron 8 of 9) intron (NM_152783, intron 8 of 9) 20759 NR_109778 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr20-1823 chr20 63567715 63567925 + 8.48 0.000 promoter-TSS (NM_033405) promoter-TSS (NM_033405) -66 NM_033405 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr9-5093 chr9 34761500 34761710 + 8.48 0.000 Intergenic Intergenic -32117 NM_001141917 259308 Hs.522093 NM_001141917 ENSG00000205108 FAM205A C9orf144B family with sequence similarity 205 member A protein-coding chrX-3443 chrX 22021477 22021687 + 8.48 0.000 Intergenic Intergenic -10743 NM_001282754 5251 Hs.495834 NM_000444 ENSG00000102174 PHEX HPDR|HPDR1|HYP|HYP1|LXHR|PEX|XLH phosphate regulating endopeptidase homolog X-linked protein-coding chr13-1899 chr13 47672521 47672731 + 8.48 0.000 Intergenic Intergenic 259996 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr9-7687 chr9 71280825 71281035 + 8.48 0.000 intron (NM_001366143, intron 1 of 25) L2a|LINE|L2 -159309 NM_001366145 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr9-3291 chr9 72538063 72538273 + 8.48 0.000 intron (NM_138691, intron 1 of 23) AluJb|SINE|Alu 16367 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr14-4935 chr14 74226517 74226727 + 8.48 0.000 Intergenic L1ME4a|LINE|L1 -12827 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr7-3793 chr7 90918626 90918836 + 8.48 0.000 intron (NM_012395, intron 7 of 13) intron (NM_012395, intron 7 of 13) 208915 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chrX-4694 chrX 86240847 86241057 + 8.48 0.000 intron (NM_001139514, intron 1 of 11) MSTA|LTR|ERVL-MaLR -22016 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr10-6189 chr10 22846261 22846471 + 8.48 0.000 Intergenic Intergenic -81658 NM_001282747 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding chr7-7655 chr7 147546379 147546589 + 8.48 0.000 intron (NM_014141, intron 10 of 22) intron (NM_014141, intron 10 of 22) -125195 NR_133929 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr2-6471 chr2 165514058 165514268 + 8.48 0.000 intron (NM_001172173, intron 2 of 6) intron (NM_001172173, intron 2 of 6) 44465 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr15-5221 chr15 96463519 96463729 + 8.48 0.000 Intergenic Intergenic 129859 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr12-5320 chr12 113584305 113584515 + 8.48 0.000 Intergenic L2a|LINE|L2 112407 NR_126425 104355219 Hs.641707 NR_126425 LHX5-AS1 locus 4010|locus4010 LHX5 antisense RNA 1 ncRNA chr3-5825 chr3 30951789 30951999 + 8.48 0.000 Intergenic MIRb|SINE|MIR -57233 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr7-6273 chr7 136104269 136104479 + 8.48 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -127015 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr17-6261 chr17 33095914 33096124 + 8.48 0.000 intron (NM_183377, intron 2 of 9) intron (NM_183377, intron 2 of 9) 103168 NM_001317225 124912 Hs.434112 NM_173847 ENSG00000141316 SPACA3 ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1 sperm acrosome associated 3 protein-coding chr4-4826 chr4 108417097 108417307 + 8.48 0.000 Intergenic Intergenic -140031 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chr11-5552 chr11 98368031 98368241 + 8.48 0.000 Intergenic Intergenic -652813 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr21-1710 chr21 31834724 31834934 + 8.48 0.000 Intergenic Intergenic -38191 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr20-3462 chr20 53014909 53015119 + 8.48 0.000 intron (NM_173485, intron 1 of 2) L2b|LINE|L2 42656 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr11-10289 chr11 105406183 105406393 + 8.48 0.000 Intergenic L2a|LINE|L2 -203785 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr5-4839 chr5 61824875 61825085 + 8.48 0.000 Intergenic Intergenic -89282 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr6-3189 chr6 129563581 129563791 + 8.48 0.000 Intergenic L2|LINE|L2 146491 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr11-2177 chr11 2256694 2256904 + 8.48 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 14153 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr12-7593 chr12 77888145 77888355 + 8.48 0.000 intron (NM_001024383, intron 1 of 39) AluJb|SINE|Alu 57356 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr1-6180 chr1 202152654 202152864 + 8.48 0.000 intron (NM_001199797, intron 7 of 9) intron (NM_001199797, intron 7 of 9) 6695 NM_001364878 5778 Hs.402773 NM_002832 ENSG00000143851 PTPN7 BPTP-4|HEPTP|LC-PTP|LPTP|PTPNI protein tyrosine phosphatase non-receptor type 7 protein-coding chr2-8899 chr2 179263667 179263877 + 8.48 0.000 intron (NM_178123, intron 1 of 17) intron (NM_178123, intron 1 of 17) 1060 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chrX-1810 chrX 94278740 94278950 + 8.48 0.000 Intergenic Intergenic 604639 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr18-3299 chr18 54354972 54355182 + 8.48 0.000 promoter-TSS (NR_138549) promoter-TSS (NR_138549) -504 NR_138549 147323 Hs.438779 NM_139171 ENSG00000174448 STARD6 - StAR related lipid transfer domain containing 6 protein-coding chr10-4220 chr10 121761240 121761450 + 8.48 0.000 intron (NM_001001976, intron 11 of 11) Tigger1|DNA|TcMar-Tigger -162887 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr14-3263 chr14 78065358 78065568 + 8.48 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -104910 NR_073547 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr5-6883 chr5 128350038 128350248 + 8.48 0.000 intron (NM_001999, intron 21 of 64) intron (NM_001999, intron 21 of 64) 188102 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr15-2292 chr15 63830611 63830821 + 8.48 0.000 intron (NM_003922, intron 1 of 77) L1MC4a|LINE|L1 3232 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding chr4-3281 chr4 134906537 134906747 + 8.48 0.000 Intergenic Intergenic 216917 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr8-6194 chr8 35073476 35073686 + 8.48 0.000 Intergenic Intergenic -161894 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr11-6798 chr11 90486751 90486961 + 8.48 0.000 intron (NR_104190, intron 1 of 6) ERV3-16A3_I-int|LTR|ERVL 69001 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA chr2-14321 chr2 217771982 217772192 + 8.48 0.000 Intergenic LTR67B|LTR|ERVL -15494 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr3-8701 chr3 186651442 186651652 + 8.48 0.000 intron (NM_001308079, intron 4 of 4) intron (NM_001308079, intron 4 of 4) 11148 NM_001308077 26998 Hs.81073 NM_014375 ENSG00000090512 FETUB 16G2|Gugu|IRL685 fetuin B protein-coding chr19-4382 chr19 2775494 2775704 + 8.48 0.000 intron (NM_003021, intron 1 of 11) L1MB7|LINE|L1 7674 NM_003021 6449 Hs.203910 NM_003021 ENSG00000104969 SGTA SGT|alphaSGT|hSGT small glutamine rich tetratricopeptide repeat containing alpha protein-coding chr8-3999 chr8 55609791 55610001 + 8.48 0.000 Intergenic Intergenic -88918 NR_134323 105375843 Hs.662416 NR_134323 ENSG00000254357 LOC105375843 - uncharacterized LOC105375843 ncRNA chr4-6284 chr4 81714347 81714557 + 8.48 0.000 Intergenic Intergenic -242545 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr10-4448 chr10 71502851 71503061 + 8.48 0.000 intron (NM_052836, intron 3 of 12) intron (NM_052836, intron 3 of 12) 8964 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr9-5419 chr9 96099191 96099401 + 8.48 0.000 non-coding (NR_033838, exon 6 of 9) non-coding (NR_033838, exon 6 of 9) 17115 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr5-7305 chr5 14807358 14807568 + 8.48 0.000 intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 18549 NR_039780 100616271 NR_039780 ENSG00000264792 MIR4637 - microRNA 4637 ncRNA chr6-4989 chr6 107983053 107983263 + 8.48 0.000 Intergenic L2c|LINE|L2 -24950 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr7-6782 chr7 23387574 23387784 + 8.48 0.000 intron (NM_006547, intron 3 of 14) L1MB8|LINE|L1 -8767 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA chr12-4489 chr12 19846671 19846881 + 8.48 0.000 Intergenic Intergenic -167909 NR_040098 100506393 Hs.658356 NR_040098 ENSG00000256287 LINC02398 - long intergenic non-protein coding RNA 2398 ncRNA chr22-1537 chr22 28223127 28223337 + 8.48 0.000 intron (NM_001145418, intron 5 of 22) intron (NM_001145418, intron 5 of 22) -236637 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr1-15706 chr1 169334327 169334537 + 8.48 0.000 intron (NR_104229, intron 1 of 12) L1PA8A|LINE|L1 33365 NM_013330 29922 Hs.706952 NM_013330 ENSG00000143156 NME7 CFAP67|MN23H7|NDK 7|NDK7|nm23-H7 NME/NM23 family member 7 protein-coding chr10-5796 chr10 106783016 106783226 + 8.48 0.000 intron (NM_001206569, intron 3 of 25) MIRb|SINE|MIR 381585 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr2-8924 chr2 183436730 183436940 + 8.48 0.000 Intergenic L2a|LINE|L2 312392 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr18-2561 chr18 6461795 6462005 + 8.48 0.000 Intergenic L1MB5|LINE|L1 -46641 NM_001365765 91133 Hs.128279 NM_173464 ENSG00000154655 L3MBTL4 HsT1031 L3MBTL histone methyl-lysine binding protein 4 protein-coding chr4-8622 chr4 172850965 172851175 + 8.48 0.000 intron (NM_001034845, intron 7 of 12) MER21C|LTR|ERVL -124192 NR_125894 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr2-8605 chr2 140829478 140829688 + 8.48 0.000 intron (NM_018557, intron 31 of 90) L1MA4|LINE|L1 -242898 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr9-4678 chr9 123541583 123541793 + 8.48 0.000 intron (NM_001352968, intron 12 of 18) intron (NM_001352968, intron 12 of 18) -56066 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr6-5343 chr6 146652081 146652291 + 8.48 0.000 intron (NM_024694, intron 3 of 35) intron (NM_024694, intron 3 of 35) 53214 NM_024694 79747 Hs.720870 NM_024694 ENSG00000118492 ADGB C6orf103|CAPN16 androglobin protein-coding chr7-6356 chr7 149825474 149825684 + 8.48 0.000 intron (NR_163594, intron 92 of 102) intron (NR_163594, intron 92 of 102) -12796 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding chr15-1713 chr15 79439977 79440187 + 8.48 0.000 intron (NM_015206, intron 1 of 3) intron (NM_015206, intron 1 of 3) 7566 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr16-1172 chr16 85028041 85028251 + 8.48 0.000 intron (NM_001286566, intron 1 of 11) intron (NM_001286566, intron 1 of 11) 395 NM_014732 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chr15-4686 chr15 65538192 65538402 + 8.48 0.000 intron (NM_016395, intron 1 of 10) Tigger1|DNA|TcMar-Tigger 7834 NM_016395 51495 Hs.512973 NM_016395 ENSG00000074696 HACD3 B-IND1|BIND1|HSPC121|PTPLAD1 3-hydroxyacyl-CoA dehydratase 3 protein-coding chr2-4820 chr2 59114595 59114805 + 8.48 0.000 Intergenic THE1B|LTR|ERVL-MaLR -103008 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr1-10634 chr1 180382437 180382647 + 8.48 0.000 intron (NM_032360, intron 6 of 7) L1MA4A|LINE|L1 55848 NR_036067 100423032 NR_036067 ENSG00000265435 MIR3121 mir-3121 microRNA 3121 ncRNA chr2-8260 chr2 100366562 100366772 + 8.48 0.000 Intergenic AluSx1|SINE|Alu -43934 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr22-2427 chr22 19548129 19548339 + 8.48 0.000 Intergenic AluSx1|SINE|Alu 18605 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr7-5675 chr7 65440999 65441209 + 8.48 0.000 Intergenic Intergenic 67249 NM_001287533 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr9-4544 chr9 81759746 81759956 + 8.48 0.000 intron (NR_109772, intron 3 of 3) Charlie29a|DNA|hAT-Charlie 70138 NR_109772 101927502 Hs.528628 NR_109772 ENSG00000233926 LOC101927502 - uncharacterized LOC101927502 ncRNA chr8-3527 chr8 118943138 118943348 + 8.48 0.000 intron (NM_002546, intron 1 of 4) LTR16E2|LTR|ERVL 8642 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding chr5-2672 chr5 34487948 34488158 + 8.48 0.000 Intergenic L3|LINE|CR1 -168275 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr17-4007 chr17 74174681 74174891 + 8.48 0.000 Intergenic AluY|SINE|Alu -28892 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr7-3126 chr7 46990756 46990966 + 8.48 0.000 Intergenic Intergenic -293739 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr19-2803 chr19 48338568 48338778 + 8.48 0.000 intron (NM_001303538, intron 5 of 6) intron (NM_001303538, intron 5 of 6) 12674 NM_001313905 2014 Hs.9999 NM_001425 ENSG00000142227 EMP3 YMP epithelial membrane protein 3 protein-coding chr22-2438 chr22 19807659 19807869 + 8.48 0.000 intron (NM_053004, intron 5 of 7) intron (NM_053004, intron 5 of 7) 47110 NM_024627 79680 Hs.105642 NM_024627 ENSG00000215012 RTL10 BOP|C22orf29 retrotransposon Gag like 10 protein-coding chr6-6558 chr6 135084674 135084884 + 8.48 0.000 Intergenic Intergenic -29957 NM_001145158 10767 Hs.378532 NM_006620 ENSG00000112339 HBS1L EF-1a|ERFS|HBS1|HSPC276|eRF3c HBS1 like translational GTPase protein-coding chr20-3992 chr20 35671569 35671779 + 8.48 0.000 intron (NR_037570, intron 13 of 13) AluJb|SINE|Alu -6774 NM_001198863 8904 Hs.246413 NM_003915 ENSG00000214078 CPNE1 COPN1|CPN1 copine 1 protein-coding chr14-2121 chr14 75331003 75331213 + 8.48 0.000 Intergenic AluJr4|SINE|Alu 36704 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr5-3875 chr5 140020707 140020917 + 8.48 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 22487 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr4-4507 chr4 61468074 61468284 + 8.48 0.000 intron (NM_001371343, intron 2 of 23) intron (NM_001371343, intron 2 of 23) 266007 NM_001371342 chr13-4165 chr13 87380104 87380314 + 8.48 0.000 Intergenic Intergenic 238531 NR_039722 100616182 NR_039722 ENSG00000266052 MIR4500 - microRNA 4500 ncRNA chr13-3657 chr13 32625282 32625492 + 8.48 0.000 intron (NM_015032, intron 1 of 34) intron (NM_015032, intron 1 of 34) 38935 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr5-8550 chr5 135854965 135855175 + 8.48 0.000 intron (NM_145282, intron 4 of 4) Tigger1|DNA|TcMar-Tigger 20394 NM_145282 153328 Hs.412418 NM_145282 ENSG00000145832 SLC25A48 - solute carrier family 25 member 48 protein-coding chr2-8553 chr2 133942919 133943129 + 8.48 0.000 Intergenic Intergenic -176911 NM_001371457 chr14-5345 chr14 102956007 102956217 + 8.48 0.000 intron (NM_006035, intron 21 of 36) intron (NM_006035, intron 21 of 36) 33456 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr7-9146 chr7 111417358 111417568 + 8.48 0.000 intron (NM_001350961, intron 4 of 7) Arthur1B|DNA|hAT-Tip100 144828 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr18-3192 chr18 45753249 45753459 + 8.48 0.000 TTS (NM_001128588) TTS (NM_001128588) 26401 NM_001146037 6563 Hs.101307 NM_015865 ENSG00000141469 SLC14A1 HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE solute carrier family 14 member 1 (Kidd blood group) protein-coding chrX-637 chrX 139692879 139693089 + 8.48 0.000 intron (NM_001099855, intron 1 of 27) intron (NM_001099855, intron 1 of 27) 15183 NM_001171876 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr4-3547 chr4 176302240 176302450 + 8.48 0.000 Intergenic Intergenic -17621 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr2-13529 chr2 151671567 151671777 + 8.48 0.000 intron (NM_001271208, intron 37 of 182) intron (NM_001271208, intron 37 of 182) 62804 NM_001271208 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr10-3929 chr10 89047466 89047676 + 8.48 0.000 Intergenic LTR16D|LTR|ERVL -15765 NR_039826 100616128 NR_039826 ENSG00000283664 MIR4679-1 - microRNA 4679-1 ncRNA chr3-4609 chr3 1927969 1928179 + 8.48 0.000 Intergenic (ATATAT)n|Simple_repeat|Simple_repeat -170729 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr1-9296 chr1 26328823 26329033 + 8.48 0.000 intron (NM_001039775, intron 15 of 19) intron (NM_001039775, intron 15 of 19) -10663 NM_145345 91544 Hs.145061 NM_145345 ENSG00000158062 UBXN11 COA-1|PP2243|SOC|SOCI|UBXD5 UBX domain protein 11 protein-coding chr7-3384 chr7 116616670 116616880 + 8.48 0.000 Intergenic Intergenic -1955 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chrX-2062 chrX 19376687 19376897 + 8.48 0.000 intron (NM_001001671, intron 19 of 28) HY3|scRNA|scRNA 32865 NM_000284 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr3-6044 chr3 50132691 50132901 + 8.48 0.000 intron (NR_135301, intron 2 of 3) intron (NR_135301, intron 2 of 3) -22262 NM_001318798 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chrX-1183 chrX 54949780 54949990 + 8.48 0.000 intron (NR_073450, intron 7 of 12) intron (NR_073450, intron 7 of 12) 22580 NR_145717 109616961 NR_145717 ENSG00000221750 SNORA11G - small nucleolar RNA, H/ACA box 11G snoRNA chr4-5215 chr4 166012415 166012625 + 8.48 0.000 intron (NM_001204760, intron 7 of 9) intron (NM_001204760, intron 7 of 9) 139283 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr2-6345 chr2 85817521 85817731 + 8.48 0.000 intron (NR_038888, intron 1 of 2) intron (NR_038888, intron 1 of 2) 2496 NR_038888 284950 Hs.570227 NR_038888 LOC284950 - uncharacterized LOC284950 ncRNA chr7-6392 chr7 152394307 152394517 + 8.48 0.000 intron (NM_170606, intron 1 of 58) L2a|LINE|L2 41591 NM_170606 58508 Hs.647120 NM_021230 ENSG00000055609 KMT2C HALR|KLEFS2|MLL3 lysine methyltransferase 2C protein-coding chr11-8585 chr11 1214957 1215167 + 8.48 0.000 Intergenic L1MB3|LINE|L1 -8004 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr7-3330 chr7 73873673 73873883 + 8.48 0.000 Intergenic Intergenic 12619 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr5-2818 chr5 33479369 33479579 + 8.48 0.000 Intergenic Intergenic 38698 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr2-9297 chr2 222309483 222309693 + 8.48 0.000 Intergenic Intergenic -8883 NR_136638 440934 Hs.732732 NR_136638 ENSG00000237732 CT75 - cancer/testis associated transcript 75 ncRNA chr20-3449 chr20 50441420 50441630 + 8.48 0.000 Intergenic Intergenic -68796 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr5-6674 chr5 60489715 60489925 + 8.48 0.000 non-coding (NR_028508, exon 2 of 2) non-coding (NR_028508, exon 2 of 2) -1755 NM_001165899 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr8-2811 chr8 124451122 124451332 + 8.48 0.000 exon (NM_017956, exon 1 of 1) exon (NM_017956, exon 1 of 1) 407 NM_017956 55039 Hs.9925 NM_017956 ENSG00000183665 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog protein-coding chr12-7004 chr12 31497487 31497697 + 8.48 0.000 intron (NM_144973, intron 1 of 20) intron (NM_144973, intron 1 of 20) -92331 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr6-7828 chr6 103245560 103245770 + 8.48 0.000 Intergenic L1ME1|LINE|L1 1613881 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr7-5420 chr7 35457761 35457971 + 8.48 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 144011 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr1-7515 chr1 154818551 154818761 + 8.48 0.000 intron (NM_170782, intron 2 of 7) MLT1A0|LTR|ERVL-MaLR 41220 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr7-4662 chr7 34011764 34011974 + 8.48 0.000 intron (NM_133468, intron 7 of 15) intron (NM_133468, intron 7 of 15) 106330 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr17-2127 chr17 20997195 20997405 + 8.48 0.000 Intergenic Intergenic 45711 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding chr13-2726 chr13 94813068 94813278 + 8.48 0.000 intron (NR_110754, intron 2 of 4) intron (NR_110754, intron 2 of 4) 52232 NR_110754 101927284 Hs.551673 NR_110754 LOC101927284 - uncharacterized LOC101927284 ncRNA chr5-6900 chr5 132529959 132530169 + 8.48 0.000 Intergenic L1ME3D|LINE|L1 13458 NM_000879 3567 Hs.2247 NM_000879 ENSG00000113525 IL5 EDF|IL-5|TRF interleukin 5 protein-coding chr3-11035 chr3 182745719 182745929 + 8.48 0.000 Intergenic Intergenic -47680 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr19-2394 chr19 9406963 9407173 + 8.48 0.000 Intergenic CpG 28505 NM_001370381 10781 Hs.656185 NM_006631 ENSG00000174652 ZNF266 HZF1 zinc finger protein 266 protein-coding chr8-3402 chr8 66377662 66377872 + 8.48 0.000 Intergenic Intergenic 51210 NR_040434 100505676 Hs.121613 NM_001242759 ENSG00000246145 RRS1-AS1 - RRS1 antisense RNA 1 (head to head) ncRNA chr20-1709 chr20 37480030 37480240 + 8.48 0.000 Intergenic Intergenic 40168 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr18-2857 chr18 8564458 8564668 + 8.48 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -44882 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr6-7831 chr6 103443103 103443313 + 8.48 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 1416338 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr10-2764 chr10 123582321 123582531 + 8.48 0.000 Intergenic Intergenic -83929 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr2-5826 chr2 232948208 232948418 + 8.48 0.000 intron (NM_019850, intron 3 of 14) AluSx1|SINE|Alu -20162 NM_001114090 25791 Hs.97316 NM_019850 ENSG00000066248 NGEF ARHGEF27|EPHEXIN neuronal guanine nucleotide exchange factor protein-coding chr2-8740 chr2 160102326 160102536 + 8.48 0.000 intron (NM_001282390, intron 13 of 13) intron (NM_001282390, intron 13 of 13) -39816 NM_001195641 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr5-3006 chr5 5933698 5933908 + 8.48 0.000 Intergenic Intergenic 403489 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr2-12426 chr2 57347329 57347539 + 8.48 0.000 Intergenic L1MC4|LINE|L1 -560217 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr2-14460 chr2 223799384 223799594 + 8.48 0.000 intron (NR_110905, intron 1 of 5) MLT1C|LTR|ERVL-MaLR 38093 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr6-2234 chr6 45665668 45665878 + 8.48 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 243498 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chrX-1403 chrX 10766194 10766404 + 8.48 0.000 intron (NM_033290, intron 1 of 9) MER20|DNA|hAT-Charlie 67384 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr5-4876 chr5 66322744 66322954 + 8.48 0.000 Intergenic Intergenic -113403 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA chr17-5518 chr17 42692607 42692817 + 8.48 0.000 exon (NM_003632, exon 17 of 24) exon (NM_003632, exon 17 of 24) 10181 NM_003632 8506 Hs.408730 NM_003632 ENSG00000108797 CNTNAP1 CASPR|CHN3|CNTNAP|NRXN4|P190 contactin associated protein 1 protein-coding chr18-1615 chr18 46449669 46449879 + 8.48 0.000 intron (NM_152470, intron 4 of 7) THE1C|LTR|ERVL-MaLR 69312 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr1-14683 chr1 61962724 61962934 + 8.48 0.000 intron (NM_001350145, intron 27 of 43) MLT1J|LTR|ERVL-MaLR -115957 NR_036058 100422902 NR_036058 ENSG00000263908 MIR3116-1 - microRNA 3116-1 ncRNA chr2-13084 chr2 111416561 111416771 + 8.48 0.000 intron (NR_136164, intron 1 of 4) intron (NR_136164, intron 1 of 4) 78495 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr11-8683 chr11 4475771 4475981 + 8.48 0.000 Intergenic Intergenic -13003 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr1-12921 chr1 117734519 117734729 + 8.48 0.000 Intergenic Intergenic 128576 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr1-8029 chr1 229705751 229705961 + 8.48 0.000 Intergenic Intergenic 79609 NM_014777 9816 Hs.533628 NM_014777 ENSG00000135763 URB2 KIAA0133|NET10|NPA2 URB2 ribosome biogenesis homolog protein-coding chr15-3193 chr15 70940523 70940733 + 8.48 0.000 intron (NM_017691, intron 8 of 15) intron (NM_017691, intron 8 of 15) 48185 NM_001363732 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr1-8020 chr1 226602507 226602717 + 8.48 0.000 3' UTR (NM_001003665, exon 4 of 4) 3' UTR (NM_001003665, exon 4 of 4) 53848 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr15-3843 chr15 83672412 83672622 + 8.48 0.000 intron (NM_207517, intron 2 of 29) intron (NM_207517, intron 2 of 29) 18394 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr17-5584 chr17 47305486 47305696 + 8.48 0.000 intron (NR_110880, intron 2 of 2) intron (NR_110880, intron 2 of 2) 18022 NR_110881 102724508 Hs.661005 NR_110880 ENSG00000263293 THCAT158 - thyroid cancer-associated transcript 158 ncRNA chr4-7463 chr4 70280521 70280731 + 8.48 0.000 Intergenic L1M1|LINE|L1 38010 NM_005212 1448 Hs.54415 NM_005212 ENSG00000171209 CSN3 CNS10|CSN10|CSNK|KCA casein kappa protein-coding chr3-7334 chr3 43967457 43967667 + 8.48 0.000 Intergenic LTR16C|LTR|ERVL -146650 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr12-7121 chr12 46784806 46785016 + 8.48 0.000 intron (NM_018018, intron 6 of 16) intron (NM_018018, intron 6 of 16) 41086 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr7-5413 chr7 34985998 34986208 + 8.48 0.000 intron (NM_015283, intron 7 of 21) L1MA7|LINE|L1 -45269 NR_031666 100302152 NR_031666 ENSG00000221669 MIR548N MIRN548N|hsa-mir-548n microRNA 548n ncRNA chr1-13717 chr1 15252060 15252270 + 8.48 0.000 intron (NM_052929, intron 2 of 30) MER66B|LTR|ERV1 4940 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr5-9055 chr5 170388841 170389051 + 8.48 0.000 promoter-TSS (NR_109899) promoter-TSS (NR_109899) 421 NM_004137 3779 Hs.484099 NM_004137 ENSG00000145936 KCNMB1 BKbeta1|K(VCA)beta|SLO-BETA|hbeta1|hslo-beta|k(VCA)beta-1|slo-beta-1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 protein-coding chr6-8573 chr6 163747996 163748206 + 8.48 0.000 Intergenic Intergenic -76617 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr5-3858 chr5 133329055 133329265 + 8.48 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 98546 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr12-2981 chr12 114865190 114865400 + 8.48 0.000 Intergenic Intergenic -181120 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr21-913 chr21 29031162 29031372 + 8.48 0.000 intron (NM_001032410, intron 4 of 18) LTR16|LTR|ERVL 6599 NM_006447 10600 Hs.99819 NM_006447 ENSG00000156256 USP16 UBP-M|UBPM ubiquitin specific peptidase 16 protein-coding chr20-2831 chr20 59841979 59842189 + 8.48 0.000 intron (NM_080672, intron 11 of 12) intron (NM_080672, intron 11 of 12) 91553 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding chr8-2502 chr8 17349462 17349672 + 8.48 0.000 intron (NM_004686, intron 4 of 13) L2c|LINE|L2 63784 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chrX-4945 chrX 111746486 111746696 + 8.48 0.000 intron (NM_001099922, intron 24 of 26) L1ME2z|LINE|L1 64934 NM_001257239 79868 Hs.443061 NM_018466 ENSG00000101901 ALG13 CDG1S|CXorf45|EIEE36|GLT28D1|MDS031|TDRD13|YGL047W ALG13 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr15-1303 chr15 51737711 51737921 + 8.48 0.000 promoter-TSS (NM_153374) promoter-TSS (NM_153374) -161 NM_153374 256586 Hs.603629 NM_153374 ENSG00000140280 LYSMD2 - LysM domain containing 2 protein-coding chr11-8761 chr11 9176446 9176656 + 8.48 0.000 intron (NR_145966, intron 8 of 21) L2a|LINE|L2 82188 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr5-2094 chr5 13959423 13959633 + 8.48 0.000 Intergenic Intergenic -15048 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr10-5584 chr10 91683742 91683952 + 8.48 0.000 Intergenic Intergenic -50776 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chr1-8666 chr1 208437526 208437736 + 8.48 0.000 Intergenic Intergenic -193247 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chrX-4808 chrX 100673524 100673734 + 8.48 0.000 TTS (NM_001129896) TTS (NM_001129896) 29430 NM_014467 27286 Hs.306339 NM_014467 ENSG00000102359 SRPX2 BPP|CBPS|PMGX|RESDX|SRPUL sushi repeat containing protein X-linked 2 protein-coding chr2-9619 chr2 4208987 4209197 + 8.48 0.000 Intergenic Intergenic 234931 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr9-7538 chr9 34613626 34613836 + 8.48 0.000 3' UTR (NM_001281426, exon 7 of 7) 3' UTR (NM_001281426, exon 7 of 7) -1634 NM_148179 138716 Hs.15961 NM_148178 ENSG00000164967 RPP25L C9orf23|bA296L22.5 ribonuclease P/MRP subunit p25 like protein-coding chr15-4874 chr15 75687579 75687789 + 8.48 0.000 exon (NM_001897, exon 3 of 10) exon (NM_001897, exon 3 of 10) 25164 NM_001897 1464 Hs.513044 NM_001897 ENSG00000173546 CSPG4 HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2 chondroitin sulfate proteoglycan 4 protein-coding chr9-5709 chr9 124530501 124530711 + 8.48 0.000 intron (NM_001278546, intron 7 of 9) intron (NM_001278546, intron 7 of 9) -23207 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chrX-3354 chrX 137968031 137968241 + 8.48 0.000 Intergenic MER81|DNA|hAT-Blackjack 402009 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr17-3352 chr17 78232068 78232278 + 8.48 0.000 exon (NM_001204211, exon 2 of 5) exon (NM_001204211, exon 2 of 5) 863 NM_001204210 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr20-1397 chr20 5323635 5323845 + 8.48 0.000 Intergenic Intergenic -7008 NM_144773 128674 Hs.375029 NM_144773 ENSG00000101292 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding chr20-1951 chr20 32532500 32532710 + 8.48 0.000 intron (NM_001256798, intron 1 of 10) intron (NM_001256798, intron 1 of 10) 22646 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chrX-1499 chrX 3690498 3690708 + 8.48 0.000 intron (NM_005044, intron 1 of 8) AluJb|SINE|Alu 23046 NM_005044 5613 Hs.390788 NM_005044 ENSG00000183943 PRKX PKX1 protein kinase X-linked protein-coding chr2-12626 chr2 72657849 72658059 + 8.48 0.000 intron (NR_135774, intron 6 of 19) intron (NR_135774, intron 6 of 19) 168079 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr2-8572 chr2 136382341 136382551 + 8.48 0.000 Intergenic Intergenic -264291 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr14-3666 chr14 91357634 91357844 + 8.48 0.000 intron (NM_001080414, intron 4 of 29) intron (NM_001080414, intron 4 of 29) 60081 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr12-3581 chr12 46304116 46304326 + 8.48 0.000 Intergenic L1MB3|LINE|L1 -35178 NM_001278387 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr4-4168 chr4 8567059 8567269 + 8.48 0.000 Intergenic MER4-int|LTR|ERV1 -13073 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr8-6381 chr8 54470606 54470816 + 8.48 0.000 Intergenic Intergenic 12776 NM_022454 64321 Hs.98367 NM_022454 ENSG00000164736 SOX17 VUR3 SRY-box transcription factor 17 protein-coding chr9-2552 chr9 130650874 130651084 + 8.48 0.000 Intergenic L1MCb|LINE|L1 -13615 NM_021619 59335 Hs.495311 NM_021619 ENSG00000130711 PRDM12 HSAN8|PFM9 PR/SET domain 12 protein-coding chr3-7517 chr3 172065583 172065793 + 8.48 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 25157 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr8-5761 chr8 141619298 141619508 + 8.48 0.000 Intergenic Intergenic -112173 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chrX-3471 chrX 31572464 31572674 + 8.48 0.000 intron (NM_000109, intron 55 of 78) LTR16C|LTR|ERVL -64271 NM_004014 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr2-12804 chr2 88458196 88458406 + 8.48 0.000 Intergenic Intergenic -5608 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr7-3347 chr7 82313410 82313620 + 8.48 0.000 intron (NM_000722, intron 3 of 38) LTR49|LTR|ERV1 130262 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr7-5302 chr7 24898570 24898780 + 8.48 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) -6054 NR_104111 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr19-5015 chr19 47531192 47531402 + 8.48 0.000 intron (NM_001277075, intron 12 of 16) intron (NM_001277075, intron 12 of 16) -16234 NM_003827 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chr4-4768 chr4 99106924 99107134 + 8.48 0.000 intron (NR_037884, intron 1 of 9) HERV17-int|LTR|ERV1 18172 NR_037884 100507053 Hs.635084 NR_037884 ENSG00000246090 LOC100507053 - uncharacterized LOC100507053 ncRNA chr7-6529 chr7 38102852 38103062 + 8.48 0.000 Intergenic Intergenic -75288 NM_001363347 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr12-2961 chr12 108167775 108167985 + 8.48 0.000 intron (NM_001304447, intron 2 of 9) MLT1K|LTR|ERVL-MaLR 36094 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr4-1228 chr4 183553919 183554129 + 8.48 0.000 Intergenic (TGAGTG)n|Simple_repeat|Simple_repeat 47942 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr10-1669 chr10 122287012 122287222 + 8.48 0.000 intron (NM_001318189, intron 5 of 15) intron (NM_001318189, intron 5 of 15) 15821 NM_144587 118663 Hs.422466 NM_144587 ENSG00000138152 BTBD16 C10orf87 BTB domain containing 16 protein-coding chr7-4351 chr7 50090372 50090582 + 8.48 0.000 intron (NM_001159878, intron 1 of 7) intron (NM_001159878, intron 1 of 7) 2769 NM_001159878 11055 Hs.388841 NM_007009 ENSG00000042813 ZPBP ZPBP1 zona pellucida binding protein protein-coding chr4-6915 chr4 15828441 15828651 + 8.48 0.000 intron (NM_001775, intron 3 of 7) L1MA7|LINE|L1 50218 NM_001775 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr17-6454 chr17 14977926 14978136 + 8.48 0.000 Intergenic L1MC3|LINE|L1 -36774 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr8-3837 chr8 30500760 30500970 + 8.48 0.000 intron (NM_001008710, intron 4 of 8) intron (NM_001008710, intron 4 of 8) -115464 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr5-9050 chr5 170149109 170149319 + 8.48 0.000 Intergenic Intergenic 43317 NM_144769 2299 Hs.87236 NM_012188 ENSG00000168269 FOXI1 FKH10|FKHL10|FREAC-6|FREAC6|HFH-3|HFH3 forkhead box I1 protein-coding chr7-6201 chr7 130684092 130684302 + 8.48 0.000 intron (NM_052933, intron 2 of 7) intron (NM_052933, intron 2 of 7) 2348 NM_052933 114960 Hs.592266 NM_052933 ENSG00000213265 TSGA13 - testis specific 13 protein-coding chr3-11252 chr3 197187096 197187306 + 8.48 0.000 intron (NM_001290983, intron 5 of 25) intron (NM_001290983, intron 5 of 25) -3070 NM_001204388 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr14-4565 chr14 46686865 46687075 + 8.48 0.000 Intergenic L1MA4A|LINE|L1 -35189 NM_080746 140801 Hs.308332 NM_080746 ENSG00000165496 RPL10L RPL10_5_1358 ribosomal protein L10 like protein-coding chr22-2398 chr22 12699588 12699798 + 8.48 0.000 Intergenic L1PA4|LINE|L1 802287 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr10-8606 chr10 97141769 97141979 + 8.48 0.000 intron (NM_003061, intron 4 of 36) AluJo|SINE|Alu 39118 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr18-2540 chr18 79960457 79960667 + 8.48 0.000 Intergenic LTR5_Hs|LTR|ERVK -4081 NM_001136180 440498 Hs.191582 NM_001136180 ENSG00000226742 HSBP1L1 - heat shock factor binding protein 1 like 1 protein-coding chr3-9545 chr3 52876723 52876933 + 8.48 0.000 intron (NM_001198974, intron 1 of 9) Tigger2a|DNA|TcMar-Tigger 20720 NM_001198974 100526772 NM_001198974 ENSG00000248592 STIMATE-MUSTN1 TMEM110-MUSTN1 STIMATE-MUSTN1 readthrough protein-coding chr14-3923 chr14 102651541 102651751 + 8.48 0.000 intron (NM_015156, intron 2 of 11) (TTTAT)n|Simple_repeat|Simple_repeat 58997 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chrX-1252 chrX 100615062 100615272 + 8.48 0.000 Intergenic L1PA11|LINE|L1 21639 NM_001278740 7105 Hs.43233 NM_003270 ENSG00000000003 TSPAN6 T245|TM4SF6|TSPAN-6 tetraspanin 6 protein-coding chr4-6538 chr4 173218066 173218276 + 8.48 0.000 intron (NM_017423, intron 1 of 11) intron (NM_017423, intron 1 of 11) -48519 NR_134241 101930370 Hs.563191 NR_134241 ENSG00000245213 LOC101930370 - uncharacterized LOC101930370 ncRNA chr3-3224 chr3 9405932 9406142 + 8.48 0.000 intron (NM_001080517, intron 1 of 22) intron (NM_001080517, intron 1 of 22) 8337 NM_001080517 55209 Hs.288164 NM_018187 ENSG00000168137 SETD5 - SET domain containing 5 protein-coding chr9-5450 chr9 98025090 98025300 + 8.48 0.000 Intergenic L2c|LINE|L2 -31537 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr3-7028 chr3 172239096 172239306 + 8.48 0.000 intron (NM_001135095, intron 4 of 25) intron (NM_001135095, intron 4 of 25) 198670 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr6-4472 chr6 35962586 35962796 + 8.48 0.000 intron (NM_001193476, intron 11 of 19) intron (NM_001193476, intron 11 of 19) -41511 NR_034069 6732 Hs.443861 NM_003137 ENSG00000096063 SRPK1 SFRSK1 SRSF protein kinase 1 protein-coding chr4-8598 chr4 170220024 170220234 + 8.48 0.000 Intergenic L1MA4|LINE|L1 -6462 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chr12-4815 chr12 56387128 56387338 + 8.48 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -24376 NM_001638 319 Hs.534302 NM_001638 ENSG00000175336 APOF Apo-F|LTIP apolipoprotein F protein-coding chr16-3121 chr16 70680900 70681110 + 8.48 0.000 exon (NM_138383, exon 2 of 15) exon (NM_138383, exon 2 of 15) 5048 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr14-3971 chr14 30078075 30078285 + 8.48 0.000 Intergenic Intergenic -150333 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr7-5185 chr7 8418753 8418963 + 8.48 0.000 Intergenic Intergenic -14751 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr4-8584 chr4 168853432 168853642 + 8.48 0.000 intron (NM_001367567, intron 1 of 11) intron (NM_001367567, intron 1 of 11) 21442 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr10-3576 chr10 80506141 80506351 + 8.48 0.000 intron (NM_030927, intron 3 of 8) AluSz6|SINE|Alu 29696 NR_120661 101929574 Hs.593663 NR_120661 ENSG00000226659 LOC101929574 - uncharacterized LOC101929574 ncRNA chr17-5379 chr17 31694095 31694305 + 8.48 0.000 Intergenic L2-3_Crp|LINE|L2 118789 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr16-1176 chr16 88166339 88166549 + 8.48 0.000 Intergenic L1ME2z|LINE|L1 -27837 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr5-7898 chr5 75376250 75376460 + 8.48 0.000 intron (NM_031361, intron 16 of 16) intron (NM_031361, intron 16 of 16) 39135 NM_000859 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding chr4-6161 chr4 38368878 38369088 + 8.48 0.000 intron (NR_149123, intron 1 of 1) L2a|LINE|L2 2069 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr9-8138 chr9 101655748 101655958 + 8.48 0.000 intron (NM_133445, intron 3 of 8) intron (NM_133445, intron 3 of 8) -60884 NM_147180 5535 Hs.151167 NM_147180 ENSG00000188386 PPP3R2 PPP3RL protein phosphatase 3 regulatory subunit B, beta protein-coding chrX-2975 chrX 24957007 24957217 + 8.48 0.000 intron (NM_016937, intron 36 of 36) intron (NM_016937, intron 36 of 36) 58853 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr17-7171 chr17 79601533 79601743 + 8.48 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 9413 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr8-5816 chr8 3883423 3883633 + 8.48 0.000 intron (NM_033225, intron 5 of 69) intron (NM_033225, intron 5 of 69) 1111386 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr2-8721 chr2 158164343 158164553 + 8.48 0.000 Intergenic L1MB4|LINE|L1 -2202 NR_038850 554201 Hs.570262 NR_038850 ENSG00000227480 CCDC148-AS1 - CCDC148 antisense RNA 1 ncRNA chr2-6653 chr2 7613066 7613276 + 8.48 0.000 Intergenic Intergenic 191910 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr17-5999 chr17 77792644 77792854 + 8.48 0.000 Intergenic Intergenic -64190 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr17-3307 chr17 61997789 61997999 + 8.48 0.000 intron (NM_005121, intron 9 of 29) intron (NM_005121, intron 9 of 29) 67384 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr11-9562 chr11 64732103 64732313 + 8.48 0.000 intron (NM_001098671, intron 12 of 16) intron (NM_001098671, intron 12 of 16) -9011 NM_138732 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr5-5986 chr5 128237801 128238011 + 8.48 0.000 Intergenic Intergenic 154140 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr3-6664 chr3 129514707 129514917 + 8.48 0.000 intron (NM_052990, intron 22 of 26) intron (NM_052990, intron 22 of 26) -13827 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr12-4550 chr12 27505262 27505472 + 8.48 0.000 Intergenic Intergenic -18839 NM_001198916 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr2-4476 chr2 240444470 240444680 + 8.48 0.000 intron (NM_002081, intron 1 of 8) intron (NM_002081, intron 1 of 8) 8912 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr19-4044 chr19 5836686 5836896 + 8.48 0.000 intron (NM_001369502, intron 1 of 3) AluJo|SINE|Alu 2001 NM_001369505 2528 Hs.631846 NM_000150 ENSG00000156413 FUT6 FCT3A|FT1A|Fuc-TVI|FucT-VI fucosyltransferase 6 protein-coding chr14-3266 chr14 79033215 79033425 + 8.48 0.000 intron (NR_073547, intron 14 of 20) L2c|LINE|L2 -166662 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr9-5383 chr9 92187227 92187437 + 8.48 0.000 intron (NM_001350291, intron 3 of 3) MIR3|SINE|MIR 3824 NM_001350291 138652 Hs.742918 NM_001350291 PRSS47 - serine protease 47 protein-coding chr3-5170 chr3 61717982 61718192 + 8.48 0.000 intron (NM_002841, intron 1 of 29) AluSz|SINE|Alu 156516 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr14-2531 chr14 19876742 19876952 + 8.48 0.000 exon (NM_001005501, exon 1 of 1) exon (NM_001005501, exon 1 of 1) 579 NM_001005501 390431 Hs.551345 NM_001005501 ENSG00000165762 OR4K2 OR14-15 olfactory receptor family 4 subfamily K member 2 protein-coding chr1-7689 chr1 21663775 21663985 + 8.48 0.000 intron (NM_002885, intron 1 of 24) intron (NM_002885, intron 1 of 24) 5477 NM_001350525 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr17-3209 chr17 3677777 3677987 + 8.48 0.000 intron (NM_175080, intron 10 of 10) intron (NM_175080, intron 10 of 10) 9070 NM_031298 83460 Hs.30011 NM_031298 ENSG00000127774 EMC6 RAB5IFL|TMEM93 ER membrane protein complex subunit 6 protein-coding chr1-9959 chr1 79534050 79534260 + 8.48 0.000 Intergenic Intergenic -527425 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr15-2940 chr15 47999453 47999663 + 8.48 0.000 Intergenic Intergenic -121432 NM_205850 283652 Hs.710240 NM_205850 ENSG00000188467 SLC24A5 JSX|NCKX5|OCA6|SHEP4 solute carrier family 24 member 5 protein-coding chr1-16595 chr1 236704195 236704405 + 8.48 0.000 intron (NM_001278344, intron 1 of 22) MER21A|LTR|ERVL 17801 NM_001278343 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr19-4476 chr19 5560878 5561088 + 8.48 0.000 non-coding (NR_027064, exon 3 of 3) non-coding (NR_027064, exon 3 of 3) 7051 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr15-1586 chr15 75987779 75987989 + 8.48 0.000 intron (NM_138573, intron 3 of 5) intron (NM_138573, intron 3 of 5) 24540 NM_138573 145957 Hs.732438 NM_138573 ENSG00000169752 NRG4 HRG4 neuregulin 4 protein-coding chr1-4941 chr1 48596884 48597094 + 8.48 0.000 intron (NM_001323575, intron 9 of 12) L2b|LINE|L2 -124781 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr4-3304 chr4 153789936 153790146 + 8.48 0.000 promoter-TSS (NM_003013) promoter-TSS (NM_003013) -958 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr4-6825 chr4 8120088 8120298 + 8.48 0.000 intron (NM_001130084, intron 1 of 19) intron (NM_001130084, intron 1 of 19) 38620 NM_001130085 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chrX-1229 chrX 81868960 81869170 + 8.48 0.000 Intergenic Intergenic 666963 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr18-1877 chr18 27018931 27019141 + 8.48 0.000 intron (NM_031422, intron 4 of 5) intron (NM_031422, intron 4 of 5) -153233 NM_001317384 361 Hs.315369 NM_001650 ENSG00000171885 AQP4 MIWC|WCH4 aquaporin 4 protein-coding chr2-8389 chr2 112905579 112905789 + 8.48 0.000 Intergenic Intergenic -7287 NM_014439 27178 Hs.166371 NM_014439 ENSG00000125571 IL37 FIL1|FIL1(ZETA)|FIL1Z|IL-1F7|IL-1H|IL-1H4|IL-1RP1|IL-37|IL1F7|IL1H4|IL1RP1 interleukin 37 protein-coding chr6-8070 chr6 123055295 123055505 + 8.48 0.000 intron (NM_001010852, intron 4 of 5) intron (NM_001010852, intron 4 of 5) 59165 NM_001010852 134829 Hs.486361 NM_001010852 ENSG00000146352 CLVS2 C6orf212|C6orf213|RLBP1L2|bA160A10.4 clavesin 2 protein-coding chr2-12960 chr2 103148716 103148926 + 8.48 0.000 Intergenic Intergenic -164392 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr17-2174 chr17 55567547 55567757 + 8.48 0.000 Intergenic Intergenic -145817 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr2-5935 chr2 26892749 26892959 + 8.48 0.000 intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 44430 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr22-2849 chr22 44669574 44669784 + 8.48 0.000 intron (NM_001017529, intron 1 of 7) intron (NM_001017529, intron 1 of 7) 1132 NM_001017528 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr4-2854 chr4 60369747 60369957 + 8.48 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -552767 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr20-2342 chr20 11935614 11935824 + 8.48 0.000 Intergenic Intergenic 17826 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr9-3073 chr9 3497521 3497731 + 8.48 0.000 intron (NM_134428, intron 1 of 17) intron (NM_134428, intron 1 of 17) -8139 NM_001282117 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr11-5622 chr11 118402084 118402294 + 8.48 0.000 intron (NM_006476, intron 1 of 2) intron (NM_006476, intron 1 of 2) 583 NM_006476 10632 Hs.486360 NM_006476 ENSG00000167283 ATP5MG ATP5JG|ATP5L ATP synthase membrane subunit g protein-coding chrX-2127 chrX 30655179 30655389 + 8.48 0.000 intron (NM_001128127, intron 1 of 19) intron (NM_001128127, intron 1 of 19) 1925 NM_203391 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr4-4040 chr4 2891241 2891451 + 8.48 0.000 intron (NM_014190, intron 4 of 15) AluSz|SINE|Alu 42891 NM_001120 10227 Hs.632581 NM_001120 ENSG00000109736 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding chr6-6380 chr6 75025329 75025539 + 8.48 0.000 Intergenic Intergenic 103348 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr8-1539 chr8 99190952 99191162 + 8.48 0.000 intron (NM_017890, intron 16 of 61) L1MEc|LINE|L1 177791 NM_015243 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr5-9011 chr5 165649027 165649237 + 8.48 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu 1178853 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr1-5519 chr1 198272240 198272450 + 8.48 0.000 intron (NM_133494, intron 5 of 9) intron (NM_133494, intron 5 of 9) 115347 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr13-1404 chr13 24270973 24271183 + 8.48 0.000 intron (NM_001286795, intron 1 of 9) intron (NM_001286795, intron 1 of 9) 328 NM_001286795 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr2-12541 chr2 66872528 66872738 + 8.48 0.000 Intergenic Intergenic -31803 NR_110169 101060019 Hs.116425 NR_110169 ENSG00000230525 LINC01799 - long intergenic non-protein coding RNA 1799 ncRNA chr1-9228 chr1 22846381 22846591 + 8.48 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 16740 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chrX-4658 chrX 80993373 80993583 + 8.48 0.000 Intergenic (TCTA)n|Simple_repeat|Simple_repeat -183601 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr22-2324 chr22 39542045 39542255 + 8.48 0.000 Intergenic Intergenic -9402 NR_130151 91582 Hs.526933 NM_194326 ENSG00000187051 RPS19BP1 AROS|S19BP ribosomal protein S19 binding protein 1 protein-coding chr4-6493 chr4 153680018 153680228 + 8.48 0.000 non-coding (NR_134873, exon 3 of 3) non-coding (NR_134873, exon 3 of 3) -4157 NM_001318790 7097 Hs.519033 NM_003264 ENSG00000137462 TLR2 CD282|TIL4 toll like receptor 2 protein-coding chr2-14256 chr2 213490074 213490284 + 8.48 0.000 intron (NR_047660, intron 9 of 14) intron (NR_047660, intron 9 of 14) 205715 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr4-4247 chr4 18679438 18679648 + 8.48 0.000 Intergenic MIRb|SINE|MIR -657668 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr2-12926 chr2 101187312 101187522 + 8.48 0.000 Intergenic MER4D1|LTR|ERV1 35757 NR_135594 100506286 Hs.679790 NR_135594 ENSG00000272902 TBC1D8-AS1 - TBC1 domain family member 8 antisense RNA 1 ncRNA chr7-5728 chr7 72864034 72864244 + 8.48 0.000 non-coding (NR_003666, exon 4 of 6) non-coding (NR_003666, exon 4 of 6) 4952 NR_003666 441251 Hs.591819 NM_001034844 ENSG00000179994 SPDYE7P - speedy/RINGO cell cycle regulator family member E7, pseudogene pseudo chrX-3414 chrX 11914232 11914442 + 8.48 0.000 intron (NM_001368398, intron 3 of 18) intron (NM_001368398, intron 3 of 18) 91898 NM_001368398 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr19-5283 chr19 280706 280916 + 8.48 0.000 TTS (NM_177543) TTS (NM_177543) 10328 NM_177543 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr2-9314 chr2 224217809 224218019 + 8.48 0.000 Intergenic Intergenic -178595 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr2-10025 chr2 26832057 26832267 + 8.48 0.000 Intergenic Intergenic -15970 NM_020134 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr3-5491 chr3 193155556 193155766 + 8.48 0.000 Intergenic Intergenic -85561 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr6-4315 chr6 15904099 15904309 + 8.48 0.000 Intergenic Intergenic -224882 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr1-16487 chr1 229185958 229186168 + 8.48 0.000 Intergenic LTR45B|LTR|ERV1 -11262 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr2-8684 chr2 150787305 150787515 + 8.48 0.000 Intergenic MER70A|LTR|ERVL 158513 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr14-1743 chr14 65965221 65965431 + 8.48 0.000 Intergenic Intergenic 494224 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr6-6502 chr6 119044448 119044658 + 8.48 0.000 intron (NM_001288576, intron 1 of 15) AluJr4|SINE|Alu 24590 NR_030315 693128 NR_030315 ENSG00000207982 MIR548B MIRN548B microRNA 548b ncRNA chr17-3279 chr17 42535976 42536186 + 8.48 0.000 promoter-TSS (NM_000263) promoter-TSS (NM_000263) -160 NM_000263 4669 Hs.50727 NM_000263 ENSG00000108784 NAGLU CMT2V|MPS-IIIB|MPS3B|NAG|UFHSD N-acetyl-alpha-glucosaminidase protein-coding chr17-3020 chr17 76702622 76702832 + 8.48 0.000 intron (NM_198530, intron 1 of 3) AluSx1|SINE|Alu 6870 NR_130926 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr14-2717 chr14 90869792 90870002 + 8.48 0.000 3' UTR (NM_001322234, exon 17 of 17) 3' UTR (NM_001322234, exon 17 of 17) -53467 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr17-3336 chr17 75368427 75368637 + 8.48 0.000 intron (NM_002086, intron 2 of 5) AluJb|SINE|Alu 37146 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr20-3976 chr20 35223799 35224009 + 8.48 0.000 intron (NM_001355008, intron 3 of 14) intron (NM_001355008, intron 3 of 14) -2786 NM_006690 10893 Hs.715494 NM_006690 ENSG00000125966 MMP24 MMP-24|MMP25|MT-MMP 5|MT-MMP5|MT5-MMP|MT5MMP|MTMMP5 matrix metallopeptidase 24 protein-coding chr15-2755 chr15 25905169 25905379 + 8.48 0.000 intron (NR_040082, intron 1 of 4) intron (NR_040082, intron 1 of 4) 2914 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr10-5141 chr10 51786618 51786828 + 8.48 0.000 intron (NM_001098512, intron 3 of 17) L2c|LINE|L2 -87128 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr1-4105 chr1 233294958 233295168 + 8.48 0.000 intron (NM_001328607, intron 1 of 1) intron (NM_001328607, intron 1 of 1) 662 NM_001328607 80003 Hs.370605 NM_014801 ENSG00000135749 PCNX2 PCNXL2 pecanex 2 protein-coding chr13-1868 chr13 23843684 23843894 + 8.48 0.000 intron (NM_005932, intron 10 of 18) L2a|LINE|L2 -45079 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr1-14567 chr1 53263042 53263252 + 8.48 0.000 intron (NM_004631, intron 10 of 18) intron (NM_004631, intron 10 of 18) 24537 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 - uncharacterized LOC100507564 ncRNA chr1-6691 chr1 53590252 53590462 + 8.48 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 130958 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr10-5014 chr10 33227572 33227782 + 8.48 0.000 intron (NM_001244973, intron 6 of 16) intron (NM_001244973, intron 6 of 16) 106990 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr11-6467 chr11 67333676 67333886 + 8.48 0.000 intron (NR_024469, intron 2 of 3) MER1A|DNA|hAT-Charlie 15942 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 - uncharacterized LOC100130987 ncRNA chr10-8674 chr10 100805264 100805474 + 8.48 0.000 intron (NM_003990, intron 6 of 10) intron (NM_003990, intron 6 of 10) 59658 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr15-5224 chr15 96588708 96588918 + 8.48 0.000 Intergenic Intergenic 192841 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr9-8239 chr9 110283978 110284188 + 8.48 0.000 Intergenic Intergenic -27576 NM_003329 7295 Hs.435136 NM_003329 ENSG00000136810 TXN TRDX|TRX|TRX1 thioredoxin protein-coding chr1-15918 chr1 185694989 185695199 + 8.48 0.000 Intergenic Intergenic -39297 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr1-16530 chr1 231966606 231966816 + 8.48 0.000 intron (NM_001164538, intron 10 of 10) intron (NM_001164538, intron 10 of 10) 40877 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr7-9000 chr7 100629221 100629431 + 8.48 0.000 exon (NM_001206855, exon 7 of 15) exon (NM_001206855, exon 7 of 15) 4324 NM_001206855 7036 Hs.544932 NM_003227 ENSG00000106327 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding chr2-5637 chr2 191030680 191030890 + 8.48 0.000 intron (NM_003151, intron 23 of 23) intron (NM_003151, intron 23 of 23) 9259 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr5-3344 chr5 135696736 135696946 + 8.48 0.000 intron (NM_001349335, intron 3 of 10) intron (NM_001349335, intron 3 of 10) -42906 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr6-2840 chr6 341104 341314 + 8.48 0.000 intron (NR_104474, intron 3 of 5) intron (NR_104474, intron 3 of 5) 49152 NM_001286555 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr7-9252 chr7 122421770 122421980 + 8.48 0.000 intron (NM_001009571, intron 16 of 27) intron (NM_001009571, intron 16 of 27) -117125 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chr16-2987 chr16 21167294 21167504 + 8.48 0.000 intron (NR_125971, intron 3 of 6) intron (NR_125971, intron 3 of 6) -7958 NM_017539 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr2-7348 chr2 1041365 1041575 + 8.48 0.000 intron (NM_018968, intron 1 of 16) MSTB|LTR|ERVL-MaLR -90078 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr22-3237 chr22 42794177 42794387 + 8.48 0.000 Intergenic Intergenic 62991 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr11-1799 chr11 119312027 119312237 + 8.48 0.000 TTS (NR_106814) TTS (NR_106814) 880 NR_106814 102465453 NR_106814 ENSG00000284148 MIR6756 hsa-mir-6756 microRNA 6756 ncRNA chr5-2098 chr5 14687141 14687351 + 8.48 0.000 intron (NM_138348, intron 4 of 6) intron (NM_138348, intron 4 of 6) 22528 NM_138348 90268 Hs.406335 NM_138348 ENSG00000154124 OTULIN AIPDS|FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding chr4-3444 chr4 91633720 91633930 + 8.48 0.000 Intergenic Intergenic 643477 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr12-2593 chr12 120249966 120250176 + 8.48 0.000 promoter-TSS (NM_025157) promoter-TSS (NM_025157) 92 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr6-2932 chr6 24902948 24903158 + 8.48 0.000 intron (NM_001286446, intron 1 of 13) MLT1G1|LTR|ERVL-MaLR 7681 NM_001346032 9750 Hs.559459 NM_014722 ENSG00000111913 RIPOR2 C6orf32|DFNB104|DIFF40|DIFF48|FAM65B|MYONAP|PL48 RHO family interacting cell polarization regulator 2 protein-coding chr20-2231 chr20 64005347 64005557 + 8.48 0.000 intron (NM_012469, intron 9 of 20) intron (NM_012469, intron 9 of 20) 24320 NM_012469 24148 Hs.31334 NM_012469 ENSG00000101161 PRPF6 ANT-1|ANT1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|hPrp6 pre-mRNA processing factor 6 protein-coding chr12-3366 chr12 95782577 95782787 + 8.48 0.000 intron (NM_001329701, intron 2 of 9) intron (NM_001329701, intron 2 of 9) 7513 NM_001329702 59277 Hs.201034 NM_021229 ENSG00000074527 NTN4 PRO3091 netrin 4 protein-coding chr5-9001 chr5 165004631 165004841 + 8.48 0.000 Intergenic L1MA6|LINE|L1 534457 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr3-9540 chr3 52620239 52620449 + 8.48 0.000 intron (NM_001366074, intron 16 of 30) intron (NM_001366074, intron 16 of 30) 65255 NM_001350074 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding chr20-3570 chr20 3445244 3445454 + 8.48 0.000 Intergenic L1MEg|LINE|L1 -25669 NM_001207047 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr10-5029 chr10 34450816 34451026 + 8.48 0.000 intron (NM_001184789, intron 4 of 22) intron (NM_001184789, intron 4 of 22) 364375 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr12-8274 chr12 125338322 125338532 + 8.48 0.000 intron (NM_052907, intron 1 of 8) intron (NM_052907, intron 1 of 8) 11811 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr8-2747 chr8 106889333 106889543 + 8.48 0.000 Intergenic MLT2B4|LTR|ERVL -119194 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr1-14136 chr1 31860525 31860735 + 8.48 0.000 Intergenic Intergenic -44579 NM_144569 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chr11-4046 chr11 12418247 12418457 + 8.48 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 40781 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr2-10920 chr2 73254147 73254357 + 8.48 0.000 TTS (NM_001080410) TTS (NM_001080410) 19944 NM_006429 10574 Hs.368149 NM_006429 ENSG00000135624 CCT7 CCTETA|CCTH|NIP7-1|TCP1ETA chaperonin containing TCP1 subunit 7 protein-coding chr10-5251 chr10 67043676 67043886 + 8.48 0.000 intron (NR_111909, intron 2 of 2) intron (NR_111909, intron 2 of 2) 31515 NR_111909 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr1-15609 chr1 161722118 161722328 + 8.48 0.000 promoter-TSS (NM_001288830) promoter-TSS (NM_001288830) -34 NM_001320241 127943 Hs.517422 NM_001002901 ENSG00000162746 FCRLB FCRL2|FCRLM2|FCRLY|FREB-2|FREB2|FcRY Fc receptor like B protein-coding chr9-3677 chr9 98909213 98909423 + 8.48 0.000 Intergenic Intergenic -34589 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr9-7852 chr9 84648441 84648651 + 8.48 0.000 Intergenic L1MA8|LINE|L1 -19912 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr3-7641 chr3 28711345 28711555 + 8.48 0.000 intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 136172 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr18-2620 chr18 32786994 32787204 + 8.48 0.000 Intergenic Intergenic -14076 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr7-9095 chr7 105981273 105981483 + 8.48 0.000 intron (NM_152750, intron 3 of 18) intron (NM_152750, intron 3 of 18) 18114 NM_001301161 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr18-1664 chr18 63774837 63775047 + 8.48 0.000 promoter-TSS (NM_001261831) promoter-TSS (NM_001261831) -433 NM_001261831 8710 Hs.138202 NM_003784 ENSG00000166396 SERPINB7 MEGSIN|PPKN|TP55 serpin family B member 7 protein-coding chr4-6992 chr4 22854782 22854992 + 8.48 0.000 Intergenic L1PBa|LINE|L1 140798 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr11-7314 chr11 61195471 61195681 + 8.48 0.000 Intergenic Intergenic -7939 NM_001079807 643834 Hs.601055 NM_001079807 ENSG00000229859 PGA3 - pepsinogen 3, group I (pepsinogen A) protein-coding chr19-4328 chr19 1631765 1631975 + 8.48 0.000 intron (NM_001136139, intron 5 of 19) intron (NM_001136139, intron 5 of 19) 20745 NM_003200 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chrX-2005 chrX 14083958 14084168 + 8.48 0.000 Intergenic L1ME2|LINE|L1 -54171 NM_001042480 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chr4-4573 chr4 75168095 75168305 + 8.48 0.000 Intergenic Intergenic -83492 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA chr11-10721 chr11 131531886 131532096 + 8.48 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 8876 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr1-14870 chr1 80212067 80212277 + 8.48 0.000 Intergenic Intergenic -323583 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr5-3498 chr5 173984256 173984466 + 8.48 0.000 Intergenic L1M3f|LINE|L1 -4809 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chr6-8210 chr6 135165042 135165252 + 8.48 0.000 Intergenic Intergenic -16161 NR_134958 4602 Hs.606320 NM_005375 ENSG00000118513 MYB Cmyb|c-myb|c-myb_CDS|efg MYB proto-oncogene, transcription factor protein-coding chr8-4422 chr8 108576547 108576757 + 8.48 0.000 Intergenic Intergenic 133028 NM_014673 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr10-5109 chr10 48925073 48925283 + 8.48 0.000 intron (NM_020945, intron 47 of 61) intron (NM_020945, intron 47 of 61) -10943 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr11-6548 chr11 70123100 70123310 + 8.48 0.000 intron (NM_018043, intron 8 of 25) intron (NM_018043, intron 8 of 25) 37795 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr2-8493 chr2 127425013 127425223 + 8.48 0.000 intron (NM_000312, intron 6 of 8) intron (NM_000312, intron 6 of 8) -1500 NR_039944 100616187 NR_039944 ENSG00000264075 MIR4783 - microRNA 4783 ncRNA chrX-1690 chrX 9535643 9535853 + 8.48 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 70690 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr3-5393 chr3 156425008 156425218 + 8.48 0.000 intron (NM_172159, intron 2 of 13) intron (NM_172159, intron 2 of 13) 21823 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr13-1072 chr13 40896061 40896271 + 8.48 0.000 intron (NR_038259, intron 1 of 5) FRAM|SINE|Alu 25584 NR_038258 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo chr1-3284 chr1 232950296 232950506 + 8.48 0.000 promoter-TSS (NR_138027) promoter-TSS (NR_138027) -210 NR_138025 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chrX-3145 chrX 17771142 17771352 + 8.48 0.000 Intergenic Intergenic 33754 NM_001037536 6322 Hs.109655 NM_006746 ENSG00000047634 SCML1 - Scm polycomb group protein like 1 protein-coding chr9-5390 chr9 92886266 92886476 + 8.48 0.000 non-coding (NR_111003, exon 4 of 4) non-coding (NR_111003, exon 4 of 4) 3804 NR_111003 642943 Hs.643602 NR_111003 LOC642943 - SPATA31 subfamily A pseudogene pseudo chr15-4092 chr15 73385771 73385981 + 8.48 0.000 Intergenic (AGATACA)n|Simple_repeat|Simple_repeat -16918 NM_005477 10021 Hs.86941 NM_005477 ENSG00000138622 HCN4 SSS2 hyperpolarization activated cyclic nucleotide gated potassium channel 4 protein-coding chr15-3721 chr15 51328958 51329168 + 8.48 0.000 intron (NM_031226, intron 1 of 10) MLT2B4|LTR|ERVL -5139 NM_001347248 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr5-4002 chr5 23207310 23207520 + 8.48 0.000 Intergenic THE1D|LTR|ERVL-MaLR -300194 NM_020227 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding chr15-3425 chr15 90348906 90349116 + 8.48 0.000 non-coding (NR_028287, exon 1 of 2) non-coding (NR_028287, exon 1 of 2) 436 NR_028287 23766 Hs.592014 NR_028287 GABARAPL3 ATG8D GABA type A receptor associated protein like 3 pseudogene pseudo chr1-11331 chr1 25435884 25436094 + 8.48 0.000 intron (NM_018202, intron 1 of 10) intron (NM_018202, intron 1 of 10) 5092 NM_018202 55219 Hs.189782 NM_018202 ENSG00000204178 MACO1 MACOILIN|TMEM57 macoilin 1 protein-coding KI270875.1-1 KI270875.1 32192 32402 + 8.48 0.000 NA NA NA NA chr4-2641 chr4 168541643 168541853 + 8.48 0.000 intron (NM_001166108, intron 2 of 21) AluSz|SINE|Alu 44696 NM_016081 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr18-1814 chr18 13580533 13580743 + 8.48 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -30476 NR_039752 100616130 NR_039752 ENSG00000263527 MIR4526 mir-4526 microRNA 4526 ncRNA chr8-6887 chr8 100975488 100975698 + 8.48 0.000 Intergenic Intergenic -22211 NM_003406 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr10-6674 chr10 108532328 108532538 + 8.48 0.000 Intergenic Intergenic -463140 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr10-5031 chr10 34843861 34844071 + 8.48 0.000 Intergenic Intergenic 28198 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr11-10172 chr11 93869351 93869561 + 8.48 0.000 Intergenic HERVH48-int|LTR|ERV1 -18838 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr6-5943 chr6 74221069 74221279 + 8.48 0.000 intron (NR_110856, intron 1 of 3) L1PA6|LINE|L1 151723 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr14-3514 chr14 103302664 103302874 + 8.48 0.000 Intergenic AluSq|SINE|Alu -14515 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr18-1894 chr18 29804955 29805165 + 8.48 0.000 Intergenic L1MEf|LINE|L1 -493850 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr1-13447 chr1 3159806 3160016 + 8.48 0.000 intron (NM_022114, intron 1 of 16) MER53|DNA|hAT 31936 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr5-7864 chr5 72952208 72952418 + 8.48 0.000 Intergenic Intergenic -3728 NM_138782 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr5-2936 chr5 141857614 141857824 + 8.48 0.000 intron (NM_032420, intron 3 of 4) intron (NM_032420, intron 3 of 4) 8483 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr8-2802 chr8 123580125 123580335 + 8.48 0.000 Intergenic Intergenic -39024 NM_058229 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr17-7686 chr17 31254674 31254884 + 8.48 0.000 intron (NM_001042492, intron 31 of 57) intron (NM_001042492, intron 31 of 57) 42460 NM_002544 4974 Hs.113874 NM_002544 ENSG00000126861 OMG OMGP oligodendrocyte myelin glycoprotein protein-coding chr8-4107 chr8 70088497 70088707 + 8.48 0.000 Intergenic LTR41|LTR|ERVL -17350 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr15-5189 chr15 93723047 93723257 + 8.48 0.000 Intergenic Intergenic -133408 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr9-3818 chr9 129421751 129421961 + 8.48 0.000 Intergenic Intergenic -66804 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr11-3579 chr11 61643327 61643537 + 8.48 0.000 Intergenic AluJb|SINE|Alu 28396 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr14-2777 chr14 20358324 20358534 + 8.48 0.000 TTS (NM_005484) TTS (NM_005484) 14815 NM_005484 10038 Hs.409412 NM_005484 ENSG00000129484 PARP2 ADPRT2|ADPRTL2|ADPRTL3|ARTD2|PARP-2|pADPRT-2 poly(ADP-ribose) polymerase 2 protein-coding chr7-4889 chr7 121733968 121734178 + 8.48 0.000 Intergenic Intergenic -139088 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr2-3858 chr2 36468997 36469207 + 8.48 0.000 intron (NM_016441, intron 5 of 16) L4_B_Mam|LINE|RTE-X 113324 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr11-2205 chr11 47454277 47454487 + 8.48 0.000 Intergenic MIR|SINE|MIR -5246 NM_005055 5913 Hs.81218 NM_005055 ENSG00000165917 RAPSN CMS11|CMS4C|FADS|FADS2|RAPSYN|RNF205 receptor associated protein of the synapse protein-coding chr20-1739 chr20 45945773 45945983 + 8.48 0.000 exon (NM_022104, exon 12 of 17) exon (NM_022104, exon 12 of 17) 11195 NM_022104 63935 Hs.472856 NM_022104 ENSG00000100982 PCIF1 C20orf67|CAPAM|PPP1R121|hCAPAM|hPCIF1 PDX1 C-terminal inhibiting factor 1 protein-coding chr11-5191 chr11 11003839 11004049 + 8.48 0.000 Intergenic LTR33B|LTR|ERVL 145727 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr15-2295 chr15 66288954 66289164 + 8.48 0.000 Intergenic MamRTE1|LINE|RTE-BovB -4250 NM_001323936 115752 Hs.446251 NM_133375 ENSG00000166938 DIS3L DIS3L1 DIS3 like exosome 3'-5' exoribonuclease protein-coding chr8-2288 chr8 120811958 120812168 + 8.48 0.000 promoter-TSS (NM_021021) promoter-TSS (NM_021021) -17 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr20-3537 chr20 1195781 1195991 + 8.48 0.000 Intergenic Intergenic -7568 NM_001009612 400831 Hs.148503 NM_001009612 ENSG00000215595 C20orf202 - chromosome 20 open reading frame 202 protein-coding chr11-8927 chr11 17435845 17436055 + 8.48 0.000 intron (NR_147094, intron 10 of 37) intron (NR_147094, intron 10 of 37) 40895 NR_147094 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr19-3210 chr19 50565123 50565333 + 8.48 0.000 intron (NM_001080457, intron 1 of 2) intron (NM_001080457, intron 1 of 2) 3207 NM_001080457 94030 Hs.120873 NM_001080457 ENSG00000131409 LRRC4B HSM|LRIG4|NGL-3 leucine rich repeat containing 4B protein-coding chr2-8873 chr2 176787320 176787530 + 8.48 0.000 Intergenic Charlie17b|DNA|hAT-Charlie 149671 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr7-4927 chr7 134096606 134096816 + 8.48 0.000 Intergenic MLT2A2|LTR|ERVL -30629 NM_001365700 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr3-5458 chr3 183222575 183222785 + 8.48 0.000 intron (NM_015078, intron 20 of 29) intron (NM_015078, intron 20 of 29) -30573 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr2-9980 chr2 11403816 11404026 + 8.48 0.000 TTS (NR_047499) TTS (NR_047499) 9940 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA chr15-2627 chr15 68169828 68170038 + 8.48 0.000 intron (NM_016166, intron 8 of 13) MIR|SINE|MIR 36177 NM_001031733 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr17-5481 chr17 41132075 41132285 + 8.48 0.000 intron (NM_001277332, intron 3 of 5) intron (NM_001277332, intron 3 of 5) -7998 NM_031854 83755 Hs.572443 NM_031854 ENSG00000213416 KRTAP4-12 KAP4.12|KRTAP4.12 keratin associated protein 4-12 protein-coding chr7-6869 chr7 50860610 50860820 + 8.48 0.000 Intergenic Intergenic -67262 NM_001371008 chr2-5232 chr2 46690162 46690372 + 8.48 0.000 Intergenic L1ME4b|LINE|L1 -8693 NM_014011 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr4-8096 chr4 124789049 124789259 + 8.48 0.000 Intergenic Intergenic -76422 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr13-2078 chr13 66681697 66681907 + 8.48 0.000 intron (NM_020403, intron 2 of 3) L2b|LINE|L2 -143367 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr4-6328 chr4 89901889 89902099 + 8.48 0.000 intron (NM_001371403, intron 2 of 8) intron (NM_001371403, intron 2 of 8) 7140 NM_007351 22915 Hs.268107 NM_007351 ENSG00000138722 MMRN1 ECM|EMILIN4|GPIa*|MMRN multimerin 1 protein-coding chr1-16400 chr1 224133092 224133302 + 8.48 0.000 intron (NR_049764, intron 2 of 3) L1MB7|LINE|L1 19086 NR_049764 23219 Hs.64691 NM_015176 ENSG00000143756 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding chr1-7648 chr1 7511815 7512025 + 8.48 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -122166 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr20-1659 chr20 31873247 31873457 + 8.48 0.000 intron (NR_148013, intron 2 of 16) intron (NR_148013, intron 2 of 16) -2608 NM_080611 128853 Hs.434108 NM_080611 ENSG00000149599 DUSP15 C20orf57|VHY dual specificity phosphatase 15 protein-coding chr22-2343 chr22 42065334 42065544 + 8.48 0.000 intron (NM_000262, intron 6 of 8) intron (NM_000262, intron 6 of 8) 5373 NM_000262 4668 Hs.75372 NM_000262 ENSG00000198951 NAGA D22S674|GALB alpha-N-acetylgalactosaminidase protein-coding chr19-3241 chr19 1373396 1373606 + 8.48 0.000 intron (NR_024247, intron 14 of 14) intron (NR_024247, intron 14 of 14) -10406 NM_001363602 374291 Hs.211914 NM_024407 ENSG00000115286 NDUFS7 CI-20|CI-20KD|MC1DN3|MY017|PSST NADH:ubiquinone oxidoreductase core subunit S7 protein-coding chr16-1005 chr16 57802259 57802469 + 8.48 0.000 intron (NM_001318710, intron 1 of 19) CpG 127 NM_005550 3801 Hs.23131 NM_005550 ENSG00000140859 KIFC3 - kinesin family member C3 protein-coding chr16-4388 chr16 49836551 49836761 + 8.48 0.000 intron (NM_001271620, intron 1 of 7) MIR|SINE|MIR -13918 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr13-2081 chr13 67241862 67242072 + 8.48 0.000 Intergenic AluSq2|SINE|Alu -11631 NM_020403 5101 Hs.654709 NM_020403 ENSG00000184226 PCDH9 - protocadherin 9 protein-coding chr2-8517 chr2 129717188 129717398 + 8.48 0.000 Intergenic Intergenic 160198 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr14-4809 chr14 67636700 67636910 + 8.48 0.000 intron (NM_001172, intron 2 of 7) intron (NM_001172, intron 2 of 7) 16885 NM_001172 384 Hs.226007 NM_001172 ENSG00000081181 ARG2 - arginase 2 protein-coding chr2-7747 chr2 37882210 37882420 + 8.48 0.000 Intergenic Charlie10|DNA|hAT-Charlie -6452 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr10-5226 chr10 63975353 63975563 + 8.48 0.000 Intergenic Intergenic -453568 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr15-1187 chr15 39511439 39511649 + 8.48 0.000 Intergenic Intergenic -69535 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr8-2294 chr8 123768301 123768511 + 8.48 0.000 promoter-TSS (NM_001317917) promoter-TSS (NM_001317917) -33 NM_001317917 157769 Hs.459174 NM_144963 ENSG00000176853 FAM91A1 - family with sequence similarity 91 member A1 protein-coding chr2-9072 chr2 202084450 202084660 + 8.48 0.000 intron (NM_001277372, intron 2 of 23) intron (NM_001277372, intron 2 of 23) 11300 NM_001367720 100652824 Hs.686898 NM_001080445 ENSG00000182329 KIAA2012 - KIAA2012 protein-coding chr10-5187 chr10 59674323 59674533 + 8.48 0.000 intron (NM_194298, intron 2 of 5) intron (NM_194298, intron 2 of 5) 35463 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr9-5342 chr9 89349967 89350177 + 8.48 0.000 intron (NM_001282688, intron 13 of 16) intron (NM_001282688, intron 13 of 16) 31221 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr11-4336 chr11 72490971 72491181 + 8.48 0.000 Intergenic MLT2B4|LTR|ERVL -56392 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr17-8302 chr17 69764169 69764379 + 8.48 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 170287 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr6-8269 chr6 139249321 139249531 + 8.48 0.000 intron (NM_153235, intron 7 of 9) intron (NM_153235, intron 7 of 9) 42572 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding chr9-5545 chr9 109438451 109438661 + 8.48 0.000 intron (NM_001145368, intron 7 of 24) intron (NM_001145368, intron 7 of 24) -9584 NM_001145372 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chr16-5247 chr16 47053444 47053654 + 8.48 0.000 Intergenic MamRep605|LTR?|LTR? -79875 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr12-4289 chr12 123258336 123258546 + 8.48 0.000 TTS (NM_001194995) TTS (NM_001194995) 9813 NM_001270434 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr13-1110 chr13 19896774 19896984 + 8.48 0.000 Intergenic AluSx1|SINE|Alu -33230 NM_001142684 9205 Hs.530988 NM_014242 ENSG00000132950 ZMYM5 HSPC050|MYM|ZNF198L1|ZNF237 zinc finger MYM-type containing 5 protein-coding chr18-2262 chr18 73605084 73605294 + 8.48 0.000 Intergenic LTR105_Mam|LTR|ERVL 280248 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr11-6417 chr11 65734433 65734643 + 8.48 0.000 Intergenic L1MA8|LINE|L1 -13600 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr6-4158 chr6 530537 530747 + 8.48 0.000 intron (NM_018303, intron 23 of 27) intron (NM_018303, intron 23 of 27) 126322 NM_148959 135458 Hs.669039 NM_148959 ENSG00000188996 HUS1B - HUS1 checkpoint clamp component B protein-coding chr2-7782 chr2 41420302 41420512 + 8.48 0.000 Intergenic Intergenic -457148 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr11-4026 chr11 9160308 9160518 + 8.48 0.000 intron (NR_145966, intron 12 of 21) intron (NR_145966, intron 12 of 21) 66050 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr15-2506 chr15 36521806 36522016 + 8.48 0.000 Intergenic Intergenic -57715 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr7-3684 chr7 47874759 47874969 + 8.48 0.000 intron (NM_138295, intron 23 of 56) intron (NM_138295, intron 23 of 56) 73627 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr4-7482 chr4 71937755 71937965 + 8.48 0.000 Intergenic Intergenic -93944 NM_004885 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr10-5534 chr10 85659986 85660196 + 8.48 0.000 intron (NM_017551, intron 12 of 15) intron (NM_017551, intron 12 of 15) 82360 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr10-2823 chr10 19816028 19816238 + 8.48 0.000 promoter-TSS (NM_001282736) promoter-TSS (NM_001282736) -299 NM_032812 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr1-14051 chr1 28122192 28122402 + 8.48 0.000 Intergenic Intergenic -33660 NM_001282562 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr1-15074 chr1 96481934 96482144 + 8.48 0.000 Intergenic Intergenic -107914 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr1-4968 chr1 54603693 54603903 + 8.48 0.000 intron (NM_015547, intron 10 of 16) L2b|LINE|L2 19727 NM_176782 338094 Hs.234786 NM_176782 ENSG00000162391 FAM151A C1orf179 family with sequence similarity 151 member A protein-coding chr2-2966 chr2 30232647 30232857 + 8.48 0.000 intron (NM_030915, intron 1 of 2) CpG 1218 NM_030915 81606 Hs.567598 NM_030915 ENSG00000213626 LBH - LBH regulator of WNT signaling pathway protein-coding chr17-4407 chr17 35088450 35088660 + 8.48 0.000 intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) 671 NR_037713 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr10-3859 chr10 26174062 26174272 + 8.48 0.000 exon (NM_017433, exon 30 of 35) exon (NM_017433, exon 30 of 35) -42140 NM_000818 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr3-5306 chr3 126754226 126754436 + 8.48 0.000 intron (NM_032343, intron 4 of 7) MIRb|SINE|MIR 50091 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr6-7420 chr6 53136015 53136225 + 8.48 0.000 intron (NM_003643, intron 2 of 5) intron (NM_003643, intron 2 of 5) 12721 NM_003643 8521 Hs.23589 NM_003643 ENSG00000137270 GCM1 GCMA|hGCMa glial cells missing transcription factor 1 protein-coding chr7-6241 chr7 133649569 133649779 + 8.48 0.000 intron (NM_021807, intron 10 of 17) intron (NM_021807, intron 10 of 17) 175214 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr7-1683 chr7 130996719 130996929 + 8.48 0.000 intron (NR_109855, intron 2 of 4) Charlie15b|DNA|hAT-Charlie 83360 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr3-8499 chr3 129282776 129282986 + 8.48 0.000 intron (NM_001370345, intron 2 of 5) intron (NM_001370345, intron 2 of 5) 3887 NM_001370344 56941 Hs.458320 NM_020187 ENSG00000183624 HMCES C3orf37|DC12|SRAPD1 5-hydroxymethylcytosine binding, ES cell specific protein-coding chr16-2877 chr16 88895451 88895661 + 8.48 0.000 intron (NM_175931, intron 2 of 10) CpG 12041 NR_135194 101927793 Hs.690953 NR_135194 ENSG00000259881 LOC101927793 - uncharacterized LOC101927793 ncRNA chr6-3607 chr6 98728536 98728746 + 8.48 0.000 Intergenic Intergenic 103059 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr6-5061 chr6 114133641 114133851 + 8.48 0.000 intron (NR_125845, intron 6 of 9) L2c|LINE|L2 -70869 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr1-10592 chr1 176152072 176152282 + 8.48 0.000 intron (NM_001286644, intron 3 of 17) AluJb|SINE|Alu 55067 NM_001286644 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr7-9631 chr7 150911214 150911424 + 8.48 0.000 Intergenic Intergenic 44485 NM_001204798 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chr11-6710 chr11 79388221 79388431 + 8.48 0.000 intron (NM_001098816, intron 1 of 33) intron (NM_001098816, intron 1 of 33) 13783 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr3-9789 chr3 71928650 71928860 + 8.48 0.000 Intergenic Intergenic -143607 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr10-4663 chr10 126961229 126961439 + 8.48 0.000 intron (NM_001290223, intron 1 of 51) AluSz|SINE|Alu 55925 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr1-9744 chr1 54363745 54363955 + 8.48 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 42544 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr1-14804 chr1 71861175 71861385 + 8.48 0.000 intron (NM_173808, intron 2 of 6) MIR|SINE|MIR -24268 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr17-7011 chr17 53284615 53284825 + 8.48 0.000 Intergenic Intergenic 299215 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding chr6-4623 chr6 46599227 46599437 + 8.48 0.000 intron (NM_016593, intron 7 of 11) L2c|LINE|L2 53486 NM_016593 51302 Hs.387367 NM_016593 ENSG00000146233 CYP39A1 - cytochrome P450 family 39 subfamily A member 1 protein-coding chr4-3921 chr4 155993489 155993699 + 8.48 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -39728 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr1-8694 chr1 224592595 224592805 + 8.48 0.000 intron (NR_136294, intron 4 of 8) intron (NR_136294, intron 4 of 8) -23617 NR_136287 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr3-5461 chr3 184292604 184292814 + 8.48 0.000 3' UTR (NM_001100120, exon 19 of 19) 3' UTR (NM_001100120, exon 19 of 19) -6532 NM_002808 5708 Hs.518464 NM_002808 ENSG00000175166 PSMD2 P97|RPN1|S2|TRAP2 proteasome 26S subunit, non-ATPase 2 protein-coding chr4-1984 chr4 185470442 185470652 + 8.48 0.000 promoter-TSS (NR_133944) promoter-TSS (NR_133944) -884 NR_133944 105377590 Hs.563183 NR_133944 ENSG00000249679 LOC105377590 - uncharacterized LOC105377590 ncRNA chr16-5552 chr16 30144397 30144607 + 8.48 0.000 Intergenic AluSx1|SINE|Alu -21193 NM_001109891 5595 Hs.861 NM_002746 ENSG00000102882 MAPK3 ERK-1|ERK1|ERT2|HS44KDAP|HUMKER1A|P44ERK1|P44MAPK|PRKM3|p44-ERK1|p44-MAPK mitogen-activated protein kinase 3 protein-coding chr1-5094 chr1 113975179 113975389 + 8.48 0.000 3' UTR (NM_181358, exon 14 of 14) 3' UTR (NM_181358, exon 14 of 14) -4107 NM_001286353 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr16-4693 chr16 81220268 81220478 + 8.48 0.000 promoter-TSS (NR_126532) promoter-TSS (NR_126532) 21 NM_001076780 114780 Hs.413525 NM_052892 ENSG00000166473 PKD1L2 PC1L2 polycystin 1 like 2 (gene/pseudogene) protein-coding chr5-2962 chr5 168113072 168113282 + 8.48 0.000 intron (NM_001368145, intron 8 of 26) AluJb|SINE|Alu -52668 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr3-5726 chr3 16633347 16633557 + 8.48 0.000 Intergenic Intergenic -28029 NM_001351 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr4-2037 chr4 7375476 7375686 + 8.48 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 59349 NM_001085382 768239 Hs.662523 NM_001085382 ENSG00000178597 PSAPL1 - prosaposin like 1 (gene/pseudogene) protein-coding chr4-5049 chr4 142128521 142128731 + 8.48 0.000 intron (NM_001331040, intron 18 of 25) intron (NM_001331040, intron 18 of 25) 492043 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chrX-5441 chrX 154013821 154014031 + 8.48 0.000 intron (NM_001025243, intron 10 of 12) intron (NM_001025243, intron 10 of 12) 5976 NM_001569 3654 Hs.522819 NM_001569 ENSG00000184216 IRAK1 IRAK|pelle interleukin 1 receptor associated kinase 1 protein-coding chr14-3427 chr14 97351846 97352056 + 8.48 0.000 Intergenic L4_C_Mam|LINE|RTE-X -106865 NR_110165 101929241 Hs.650839 NR_110165 ENSG00000246084 LINC02325 - long intergenic non-protein coding RNA 2325 ncRNA chr2-9681 chr2 37926787 37926997 + 8.48 0.000 intron (NM_001322211, intron 1 of 10) AluJr4|SINE|Alu 1361 NM_001322211 151393 Hs.591566 NM_144713 ENSG00000115841 RMDN2 BLOCK18|FAM82A|FAM82A1|PRO34163|PYST9371|RMD-2|RMD2|RMD4 regulator of microtubule dynamics 2 protein-coding chr17-2866 chr17 31513059 31513269 + 8.48 0.000 intron (NM_001346748, intron 1 of 12) intron (NM_001346748, intron 1 of 12) -21719 NR_039877 100616248 NR_039877 ENSG00000284424 MIR4724 mir-4724 microRNA 4724 ncRNA chr3-6172 chr3 59634495 59634705 + 8.48 0.000 Intergenic Intergenic 23897 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr16-2654 chr16 35405791 35406001 + 8.48 0.000 Intergenic Intergenic 42365 NR_027079 283914 Hs.385772 NR_027079 ENSG00000259841 LINC01566 - long intergenic non-protein coding RNA 1566 ncRNA KN538372.1-1 KN538372.1 96977 97187 + 8.48 0.000 NA NA NA NA chr6-5567 chr6 7109794 7110004 + 8.48 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 1938 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr2-3798 chr2 19801494 19801704 + 8.48 0.000 Intergenic Intergenic -67255 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr2-4724 chr2 238313832 238314042 + 8.48 0.000 Intergenic Intergenic -6581 NM_015650 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding chr1-15551 chr1 158292568 158292778 + 8.48 0.000 exon (NM_001765, exon 4 of 6) exon (NM_001765, exon 4 of 6) 2750 NM_001765 911 Hs.132448 NM_001765 ENSG00000158481 CD1C BDCA1|CD1|CD1A|R7 CD1c molecule protein-coding chr11-4374 chr11 75313349 75313559 + 8.48 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 21732 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr9-7601 chr9 36909873 36910083 + 8.48 0.000 intron (NR_103999, intron 6 of 8) AluJb|SINE|Alu -16447 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr2-6039 chr2 118221996 118222206 + 8.48 0.000 Intergenic Intergenic -35715 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr2-14540 chr2 230138154 230138364 + 8.48 0.000 Intergenic Intergenic -69335 NM_152527 151473 Hs.504317 NM_152527 ENSG00000163053 SLC16A14 MCT14 solute carrier family 16 member 14 protein-coding chr22-3836 chr22 31974656 31974866 + 8.48 0.000 intron (NR_149128, intron 2 of 4) L2a|LINE|L2 3938 NR_149128 105372999 Hs.512525 NR_149128 LINC02558 - long intergenic non-protein coding RNA 2558 ncRNA chr10-7209 chr10 114408019 114408229 + 8.48 0.000 Intergenic Intergenic -3346 NM_001351069 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr9-8766 chr9 133641966 133642176 + 8.48 0.000 intron (NM_000787, intron 2 of 11) intron (NM_000787, intron 2 of 11) 5708 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr22-2723 chr22 38538756 38538966 + 8.48 0.000 intron (NM_001363017, intron 7 of 11) AluSz|SINE|Alu 29548 NM_001278208 11144 Hs.339396 NM_007068 ENSG00000100206 DMC1 DMC1H|LIM15|dJ199H16.1 DNA meiotic recombinase 1 protein-coding chr14-4019 chr14 45242364 45242574 + 8.48 0.000 exon (NM_018353, exon 4 of 17) exon (NM_018353, exon 4 of 17) 10733 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding chr3-8317 chr3 64720900 64721110 + 8.48 0.000 intron (NR_038264, intron 1 of 5) AluJb|SINE|Alu -33005 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr2-6104 chr2 200588549 200588759 + 8.48 0.000 intron (NM_001159, intron 1 of 34) intron (NM_001159, intron 1 of 34) 2640 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr1-14180 chr1 33237459 33237669 + 8.48 0.000 Intergenic MIRb|SINE|MIR -18928 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr11-4583 chr11 129710626 129710836 + 8.48 0.000 Intergenic Intergenic -93462 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr14-2932 chr14 44050454 44050664 + 8.48 0.000 Intergenic L2a|LINE|L2 456724 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr4-3015 chr4 127055494 127055704 + 8.48 0.000 Intergenic L1M1|LINE|L1 -577358 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr10-5709 chr10 100793877 100794087 + 8.48 0.000 intron (NM_003990, intron 6 of 10) intron (NM_003990, intron 6 of 10) 48271 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr6-2414 chr6 155142593 155142803 + 8.48 0.000 intron (NM_012454, intron 4 of 25) intron (NM_012454, intron 4 of 25) 52409 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr5-7214 chr5 8108234 8108444 + 8.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 239191 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr12-7860 chr12 104582722 104582932 + 8.48 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -8806 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr2-9813 chr2 139982890 139983100 + 8.48 0.000 Intergenic Intergenic 603690 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr1-4734 chr1 3714486 3714696 + 8.48 0.000 intron (NM_001204185, intron 4 of 12) intron (NM_001204185, intron 4 of 12) 16545 NM_001204192 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr22-1736 chr22 21689072 21689282 + 8.48 0.000 intron (NM_148175, intron 15 of 20) intron (NM_148175, intron 15 of 20) 23165 NM_148175 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr12-6605 chr12 126457475 126457685 + 8.48 0.000 intron (NR_130748, intron 4 of 11) intron (NR_130748, intron 4 of 11) -8253 NR_147498 283435 Hs.667334 NR_147498 LINC02825 - long intergenic non-protein coding RNA 2825 ncRNA chr10-8434 chr10 85988440 85988650 + 8.48 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 276243 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr6-4567 chr6 42711356 42711566 + 8.48 0.000 intron (NM_000322, intron 1 of 2) intron (NM_000322, intron 1 of 2) 11136 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr22-1954 chr22 48893105 48893315 + 8.48 0.000 intron (NR_038944, intron 4 of 6) intron (NR_038944, intron 4 of 6) 26440 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr1-15191 chr1 109732264 109732474 + 8.48 0.000 Intergenic L2c|LINE|L2 8669 NM_000849 2947 Hs.2006 NM_000849 ENSG00000134202 GSTM3 GST5|GSTB|GSTM3-3|GTM3 glutathione S-transferase mu 3 protein-coding chr1-6044 chr1 81707234 81707444 + 8.48 0.000 intron (NM_001297704, intron 1 of 20) intron (NM_001297704, intron 1 of 20) 7569 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr22-2542 chr22 25931466 25931676 + 8.48 0.000 intron (NM_001318245, intron 34 of 43) intron (NM_001318245, intron 34 of 43) 189383 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr20-4052 chr20 37617646 37617856 + 8.48 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 5368 NR_047461 100861522 Hs.580680 NR_047461 ENSG00000225759 LINC00489 - long intergenic non-protein coding RNA 489 ncRNA chr1-14464 chr1 47470517 47470727 + 8.48 0.000 Intergenic AluSx3|SINE|Alu -33305 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr19-3109 chr19 11208639 11208849 + 8.48 0.000 exon (NM_020812, exon 39 of 48) exon (NM_020812, exon 39 of 48) 5116 NR_134909 105372273 Hs.579864 NR_134909 ENSG00000267082 LOC105372273 - uncharacterized LOC105372273 ncRNA chrX-4603 chrX 73817247 73817457 + 8.48 0.000 non-coding (NR_003255, exon 1 of 1) non-coding (NR_003255, exon 1 of 1) 25147 NR_003255 9383 Hs.529901 NR_003255 ENSG00000270641 TSIX LINC00013|NCRNA00013|XIST-AS|XIST-AS1|XISTAS TSIX transcript, XIST antisense RNA ncRNA chr7-8931 chr7 95843368 95843578 + 8.48 0.000 intron (NM_004411, intron 5 of 16) L1MEc|LINE|L1 70967 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chrX-4155 chrX 30913158 30913368 + 8.48 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -24009 NM_152787 257397 Hs.188256 NM_152787 ENSG00000157625 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 protein-coding chr11-9981 chr11 78032998 78033208 + 8.48 0.000 intron (NM_001203261, intron 2 of 2) MIR3|SINE|MIR -9827 NM_023930 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr8-6196 chr8 35160397 35160607 + 8.48 0.000 Intergenic Intergenic -74973 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr12-6363 chr12 62567479 62567689 + 8.48 0.000 intron (NM_001278469, intron 29 of 35) L2|LINE|L2 35850 NR_121682 283416 Hs.375881 NM_175895 ENSG00000221949 LINC01465 C12orf61 long intergenic non-protein coding RNA 1465 ncRNA chr7-4924 chr7 132290015 132290225 + 8.48 0.000 intron (NM_020911, intron 4 of 31) intron (NM_020911, intron 4 of 31) 29259 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr6-5898 chr6 44150255 44150465 + 8.48 0.000 intron (NM_001318792, intron 17 of 23) intron (NM_001318792, intron 17 of 23) -8460 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr13-3522 chr13 22757139 22757349 + 8.48 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 140937 NR_033774 646201 Hs.729338 NR_033774 BASP1P1 - BASP1 pseudogene 1 pseudo chr12-4098 chr12 56932821 56933031 + 8.48 0.000 intron (NM_148897, intron 1 of 3) intron (NM_148897, intron 1 of 3) 1482 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chr10-5138 chr10 51682594 51682804 + 8.48 0.000 intron (NM_001098512, intron 3 of 17) MIRb|SINE|MIR 16896 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr4-3654 chr4 25703290 25703500 + 8.48 0.000 Intergenic AluSg|SINE|Alu 46931 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr5-3844 chr5 121787418 121787628 + 8.48 0.000 Intergenic Intergenic -64359 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr1-3777 chr1 6634685 6634895 + 8.48 0.000 3' UTR (NM_138350, exon 5 of 5) 3' UTR (NM_138350, exon 5 of 5) 9640 NM_001195752 90326 Hs.689006 NM_138350 ENSG00000041988 THAP3 - THAP domain containing 3 protein-coding chr8-2836 chr8 130201225 130201435 + 8.48 0.000 intron (NM_001362925, intron 5 of 29) intron (NM_001362925, intron 5 of 29) 95203 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr2-8637 chr2 145384018 145384228 + 8.48 0.000 Intergenic Intergenic 716156 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr3-9542 chr3 52707869 52708079 + 8.48 0.000 TTS (NM_001348414) TTS (NM_001348414) 1868 NM_014041 28972 Hs.11125 NM_014041 ENSG00000114902 SPCS1 HSPC033|SPC1|SPC12|YJR010C-A signal peptidase complex subunit 1 protein-coding chr1-16002 chr1 197693013 197693223 + 8.48 0.000 intron (NR_125340, intron 3 of 19) intron (NR_125340, intron 3 of 19) 82362 NM_001300858 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chrX-2348 chrX 64977739 64977949 + 8.48 0.000 intron (NM_001178032, intron 1 of 4) intron (NM_001178032, intron 1 of 4) -1311 NM_001178033 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr14-1951 chr14 30086831 30087041 + 8.48 0.000 Intergenic L1MA2|LINE|L1 -159089 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr7-8516 chr7 54426863 54427073 + 8.48 0.000 Intergenic Intergenic 96271 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr4-6946 chr4 18014040 18014250 + 8.48 0.000 intron (NR_158566, intron 1 of 5) intron (NR_158566, intron 1 of 5) 7610 NR_136669 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr6-6410 chr6 84936306 84936516 + 8.48 0.000 Intergenic L1PA6|LINE|L1 -171813 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box transcription factor 18 protein-coding chr3-7107 chr3 182216857 182217067 + 8.48 0.000 Intergenic Intergenic 264598 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr21-858 chr21 32888827 32889037 + 8.48 0.000 Intergenic L3|LINE|CR1 -69956 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA chr4-5412 chr4 7307835 7308045 + 8.48 0.000 intron (NM_020777, intron 1 of 26) (TG)n|Simple_repeat|Simple_repeat -2510 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr19-6473 chr19 17348925 17349135 + 8.48 0.000 Intergenic Intergenic 11477 NM_133644 84705 Hs.334885 NM_032620 ENSG00000130299 GTPBP3 COXPD23|GTPBG3|MSS1|MTGP1|THDF1 GTP binding protein 3, mitochondrial protein-coding chr4-6201 chr4 52298629 52298839 + 8.48 0.000 Intergenic Intergenic 247430 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr13-3432 chr13 101950465 101950675 + 8.48 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) 17176 NR_039603 100616110 NR_039603 ENSG00000265164 MIR2681 - microRNA 2681 ncRNA chr2-7447 chr2 12241270 12241480 + 8.48 0.000 intron (NR_110196, intron 3 of 5) Tigger2a|DNA|TcMar-Tigger 42245 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr10-6858 chr10 27797582 27797792 + 8.48 0.000 Intergenic Intergenic -51868 NM_001242702 283078 Hs.128193 NM_173576 ENSG00000150051 MKX C10orf48|IFRX|IRXL1 mohawk homeobox protein-coding chr8-6907 chr8 102245096 102245306 + 8.48 0.000 intron (NR_125415, intron 2 of 2) Tigger3b|DNA|TcMar-Tigger 5750 NR_125415 101927221 Hs.492445 NR_125415 ENSG00000246263 UBR5-AS1 - UBR5 antisense RNA 1 ncRNA chr10-4071 chr10 43190898 43191108 + 8.48 0.000 Intergenic L1ME3B|LINE|L1 36106 NM_001319656 55454 Hs.657569 NM_018590 ENSG00000169826 CSGALNACT2 CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding chr8-6755 chr8 90831842 90832052 + 8.48 0.000 intron (NM_022351, intron 3 of 12) intron (NM_022351, intron 3 of 12) 40172 NM_022351 64168 Hs.719466 NM_022351 ENSG00000123119 NECAB1 EFCBP1|STIP-1 N-terminal EF-hand calcium binding protein 1 protein-coding chr8-7003 chr8 108989305 108989515 + 8.48 0.000 Intergenic Intergenic -97218 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr3-6428 chr3 101942413 101942623 + 8.48 0.000 intron (NR_026934, intron 1 of 3) intron (NR_026934, intron 1 of 3) 1659 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr1-5363 chr1 239909961 239910171 + 8.48 0.000 3' UTR (NM_000740, exon 5 of 5) 3' UTR (NM_000740, exon 5 of 5) -10194 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr6-3477 chr6 5132685 5132895 + 8.48 0.000 intron (NR_104417, intron 2 of 3) intron (NR_104417, intron 2 of 3) 15532 NR_037462 100500900 NR_037462 ENSG00000265083 MIR3691 mir-3691 microRNA 3691 ncRNA chr20-3411 chr20 41363814 41364024 + 8.48 0.000 intron (NM_052846, intron 2 of 3) intron (NM_052846, intron 2 of 3) 2899 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr20-3877 chr20 30385290 30385500 + 8.48 0.000 intron (NR_145491, intron 2 of 7) intron (NR_145491, intron 2 of 7) 8231 NR_003579 284802 Hs.653099 NM_207350 FRG1BP C20orf80|FRG1B|bA348I14.2 FSHD region gene 1 family member B, pseudogene pseudo chr11-5629 chr11 120104627 120104837 + 8.48 0.000 Intergenic L2c|LINE|L2 24121 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr5-8506 chr5 133728068 133728278 + 8.48 0.000 Intergenic Intergenic -115632 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding KI270772.1-5 KI270772.1 44392 44602 + 8.48 0.000 NA NA NA NA chr2-6185 chr2 6544553 6544763 + 8.48 0.000 Intergenic AluY|SINE|Alu 89129 NR_110500 102800315 Hs.729713 NR_110498 ENSG00000236172 LINC01246 - long intergenic non-protein coding RNA 1246 ncRNA chr2-8809 chr2 168705635 168705845 + 8.48 0.000 intron (NM_001256126, intron 6 of 10) AmnSINE1|SINE|5S-Deu-L2 80689 NR_045786 100861402 Hs.506829 NR_045786 ENSG00000227617 CERS6-AS1 - CERS6 antisense RNA 1 ncRNA chr5-6200 chr5 65014774 65014984 + 8.48 0.000 intron (NM_005869, intron 13 of 13) intron (NM_005869, intron 13 of 13) 245949 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr9-4154 chr9 2565860 2566070 + 8.48 0.000 intron (NR_015375, intron 1 of 3) Charlie20a|DNA|hAT-Charlie -55822 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr2-2868 chr2 172428140 172428350 + 8.48 0.000 intron (NM_001365530, intron 1 of 25) CpG 659 NM_001365530 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr20-3571 chr20 3452730 3452940 + 8.48 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -18183 NM_001207047 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chrX-4911 chrX 108594041 108594251 + 8.48 0.000 intron (NM_033380, intron 21 of 50) L2a|LINE|L2 142231 NM_003604 8471 Hs.407141 NM_003604 ENSG00000133124 IRS4 IRS-4|PY160 insulin receptor substrate 4 protein-coding chr15-2073 chr15 62426477 62426687 + 8.48 0.000 Intergenic Intergenic 83553 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr5-2573 chr5 53161890 53162100 + 8.48 0.000 Intergenic MER20B|DNA|hAT-Charlie 52153 NR_104654 257396 Hs.12326 NR_034107 ENSG00000247796 LOC257396 - uncharacterized LOC257396 ncRNA chr6-4935 chr6 100235481 100235691 + 8.48 0.000 Intergenic MIRb|SINE|MIR 228089 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr7-5486 chr7 42630328 42630538 + 8.48 0.000 Intergenic L1ME3F|LINE|L1 76014 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr16-5704 chr16 80523470 80523680 + 8.48 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -17159 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr20-1735 chr20 45419375 45419585 + 8.48 0.000 non-coding (NR_047692, exon 4 of 11) non-coding (NR_047692, exon 4 of 11) 3339 NM_001184728 51604 Hs.437388 NM_015937 ENSG00000124155 PIGT CGI-06|MCAHS3|NDAP|PNH2 phosphatidylinositol glycan anchor biosynthesis class T protein-coding chr2-11113 chr2 131395271 131395481 + 8.48 0.000 Intergenic CpG -7525 NR_036499 389043 Hs.586791 NR_036499 LINC01120 - long intergenic non-protein coding RNA 1120 ncRNA chr6-1966 chr6 144912635 144912845 + 8.48 0.000 Intergenic Intergenic 507085 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr13-4313 chr13 100361715 100361925 + 8.48 0.000 intron (NR_148031, intron 18 of 22) L1ME2|LINE|L1 119195 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr2-9716 chr2 59946195 59946405 + 8.48 0.000 Intergenic Intergenic 436736 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr20-4092 chr20 40087536 40087746 + 8.48 0.000 Intergenic Intergenic 83180 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr4-7919 chr4 107463897 107464107 + 8.48 0.000 Intergenic Intergenic 256232 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr10-4796 chr10 7597237 7597447 + 8.48 0.000 intron (NM_001001851, intron 7 of 11) intron (NM_001001851, intron 7 of 11) 22331 NM_032817 80760 Hs.498586 NM_030569 ENSG00000123243 ITIH5 ITI-HC5|PP14776 inter-alpha-trypsin inhibitor heavy chain 5 protein-coding chrX-3614 chrX 85224428 85224638 + 8.48 0.000 intron (NM_001367858, intron 1 of 11) intron (NM_001367858, intron 1 of 11) 13827 NR_110651 101928128 Hs.636014 NR_110651 LOC101928128 - uncharacterized LOC101928128 ncRNA chr17-7621 chr17 27870305 27870515 + 8.48 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 22955 NM_001076680 201229 Hs.687951 NM_001076680 ENSG00000232859 LYRM9 C17orf108|HSD24 LYR motif containing 9 protein-coding chr5-7040 chr5 167756017 167756227 + 8.48 0.000 intron (NM_001080428, intron 1 of 24) MIRc|SINE|MIR 1193 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr18-2773 chr18 1452124 1452334 + 8.48 0.000 Intergenic L1MA2|LINE|L1 -92600 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr5-4467 chr5 7560298 7560508 + 8.48 0.000 intron (NM_020546, intron 3 of 24) intron (NM_020546, intron 3 of 24) 164265 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chr1-6366 chr1 8679234 8679444 + 8.48 0.000 intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 138301 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr13-2166 chr13 112925391 112925601 + 8.48 0.000 Intergenic L1ME3|LINE|L1 43142 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chrX-4523 chrX 67089408 67089618 + 8.48 0.000 Intergenic L1MA4A|LINE|L1 -450215 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr17-8160 chr17 60479791 60480001 + 8.48 0.000 intron (NM_006380, intron 3 of 12) MIR|SINE|MIR 46344 NM_001282476 10513 Hs.84084 NM_006380 ENSG00000062725 APPBP2 APP-BP2|HS.84084|PAT1 amyloid beta precursor protein binding protein 2 protein-coding chr5-1928 chr5 177509337 177509547 + 8.48 0.000 intron (NM_001308235, intron 2 of 5) intron (NM_001308235, intron 2 of 5) 415 NM_001308236 79930 Hs.720849 NM_024872 ENSG00000146094 DOK3 DOKL docking protein 3 protein-coding chr6-7995 chr6 116028163 116028373 + 8.48 0.000 intron (NM_002031, intron 1 of 7) intron (NM_002031, intron 1 of 7) -10463 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo chr13-2540 chr13 62689951 62690161 + 8.48 0.000 intron (NR_047029, intron 6 of 7) intron (NR_047029, intron 6 of 7) 106636 NR_047029 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr6-6898 chr6 12769920 12770130 + 8.48 0.000 intron (NM_001322308, intron 3 of 13) intron (NM_001322308, intron 3 of 13) 51326 NM_001322310 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr2-14670 chr2 236466273 236466483 + 8.48 0.000 intron (NR_073043, intron 5 of 19) L1MEi|LINE|L1 37319 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr8-4255 chr8 92458594 92458804 + 8.48 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 196795 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr5-3020 chr5 10107304 10107514 + 8.48 0.000 Intergenic Intergenic 142479 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr11-9476 chr11 61973569 61973779 + 8.48 0.000 Intergenic Intergenic -6040 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr21-1759 chr21 35532013 35532223 + 8.48 0.000 intron (NR_073512, intron 1 of 2) AluJo|SINE|Alu 48646 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA KI270732.1-1 KI270732.1 39328 39538 + 8.48 0.000 NA NA NA NA chr11-3639 chr11 78957437 78957647 + 8.48 0.000 intron (NM_001098816, intron 6 of 33) intron (NM_001098816, intron 6 of 33) -382678 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr3-8896 chr3 11672895 11673105 + 8.48 0.000 intron (NM_001284390, intron 2 of 6) HAL1|LINE|L1 -29085 NM_001128219 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr17-5600 chr17 48163464 48163674 + 8.48 0.000 intron (NM_003726, intron 10 of 12) intron (NM_003726, intron 10 of 12) -7058 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr2-3650 chr2 158686187 158686397 + 8.48 0.000 intron (NR_135242, intron 1 of 3) intron (NR_135242, intron 1 of 3) 48710 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr6-5163 chr6 127216441 127216651 + 8.48 0.000 Intergenic Intergenic -50136 NM_001242851 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr6-5098 chr6 119315882 119316092 + 8.48 0.000 intron (NM_005907, intron 2 of 12) intron (NM_005907, intron 2 of 12) 33774 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chr8-7136 chr8 121136580 121136790 + 8.48 0.000 Intergenic Intergenic -324639 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr9-6458 chr9 86500680 86500890 + 8.48 0.000 Intergenic L1MCa|LINE|L1 -146375 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr7-6209 chr7 130933158 130933368 + 8.48 0.000 Intergenic L2b|LINE|L2 19799 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr4-7953 chr4 110424358 110424568 + 8.48 0.000 Intergenic Intergenic -51692 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr17-4390 chr17 29032682 29032892 + 8.48 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -10354 NM_016518 51268 Hs.462585 NM_016518 ENSG00000179761 PIPOX LPIPOX pipecolic acid and sarcosine oxidase protein-coding chr16-5535 chr16 26517332 26517542 + 8.48 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 492200 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr22-2898 chr22 46344181 46344391 + 8.48 0.000 intron (NR_104240, intron 3 of 10) L3|LINE|CR1 8572 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr19-3907 chr19 42402864 42403074 + 8.48 0.000 exon (NM_005357, exon 9 of 10) exon (NM_005357, exon 9 of 10) 5821 NR_073180 100996307 Hs.466840 NR_073179 ENSG00000213904 LIPE-AS1 - LIPE antisense RNA 1 ncRNA chr11-4372 chr11 75058988 75059198 + 8.48 0.000 Intergenic Intergenic 37797 NM_001005285 341152 Hs.554515 NM_001005285 ENSG00000171561 OR2AT4 OR11-265 olfactory receptor family 2 subfamily AT member 4 protein-coding chr8-5973 chr8 21379802 21380012 + 8.48 0.000 Intergenic L1PA17|LINE|L1 81668 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA chr22-2379 chr22 46445261 46445471 + 8.48 0.000 intron (NM_014246, intron 2 of 34) AluSx|SINE|Alu 92254 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr15-2011 chr15 45715841 45716051 + 8.48 0.000 intron (NR_135680, intron 1 of 4) MSTC|LTR|ERVL-MaLR 10751 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr17-3655 chr17 7129149 7129359 + 8.48 0.000 Intergenic MamRep1151|LTR?|LTR? -14443 NM_001201352 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chr11-10046 chr11 83626576 83626786 + 8.48 0.000 intron (NM_001142699, intron 19 of 27) intron (NM_001142699, intron 19 of 27) 55744 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr2-6394 chr2 122561421 122561631 + 8.48 0.000 Intergenic L2a|LINE|L2 511955 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr2-6466 chr2 162528712 162528922 + 8.48 0.000 intron (NM_033272, intron 3 of 15) L2c|LINE|L2 184449 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr7-8374 chr7 44511994 44512204 + 8.48 0.000 TTS (NM_001101648) TTS (NM_001101648) -21441 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr5-5040 chr5 88785445 88785655 + 8.48 0.000 promoter-TSS (NM_001364353) promoter-TSS (NM_001364353) -39 NM_001364353 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr5-8845 chr5 151615612 151615822 + 8.48 0.000 Intergenic Intergenic -46773 NM_001447 2196 Hs.591255 NM_001447 ENSG00000086570 FAT2 CDHF8|CDHR9|HFAT2|MEGF1|SCA45 FAT atypical cadherin 2 protein-coding chrX-1699 chrX 15736478 15736688 + 8.48 0.000 intron (NR_160544, intron 4 of 11) L4_A_Mam|LINE|RTE-X -1687 NM_007220 11238 Hs.653287 NM_007220 ENSG00000169239 CA5B CA-VB|CAVB carbonic anhydrase 5B protein-coding chr21-878 chr21 43307174 43307384 + 8.48 0.000 Intergenic Intergenic 24760 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr8-7002 chr8 108882053 108882263 + 8.48 0.000 Intergenic LTR78|LTR|ERV1 -94564 NR_136411 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr14-2997 chr14 52931074 52931284 + 8.48 0.000 intron (NM_006832, intron 2 of 14) L2b|LINE|L2 19871 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr5-4710 chr5 40977424 40977634 + 8.48 0.000 intron (NM_000587, intron 16 of 17) LTR33|LTR|ERVL 68032 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 - complement C7 protein-coding chr11-9979 chr11 77873942 77874152 + 8.48 0.000 intron (NR_133637, intron 3 of 4) intron (NR_133637, intron 3 of 4) 32909 NM_001363564 28971 Hs.745040 NM_024684 ENSG00000087884 AAMDC C11orf67|CK067|PTD015 adipogenesis associated Mth938 domain containing protein-coding chr4-4684 chr4 85899658 85899868 + 8.48 0.000 intron (NM_001287805, intron 1 of 7) intron (NM_001287805, intron 1 of 7) -30253 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr4-3144 chr4 178137990 178138200 + 8.48 0.000 Intergenic HERVL18-int|LTR|ERVL -230159 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr1-13033 chr1 165248437 165248647 + 8.48 0.000 intron (NM_177398, intron 4 of 8) intron (NM_177398, intron 4 of 8) 107699 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr3-5732 chr3 18015327 18015537 + 8.48 0.000 intron (NR_161333, intron 2 of 4) intron (NR_161333, intron 2 of 4) 52880 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr2-4097 chr2 144377046 144377256 + 8.48 0.000 Intergenic L2|LINE|L2 -44082 NM_001354360 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr18-2409 chr18 8468900 8469110 + 8.48 0.000 Intergenic Intergenic -101971 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr20-2757 chr20 51017464 51017674 + 8.48 0.000 intron (NM_002237, intron 1 of 2) L1ME5|LINE|L1 5538 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr10-7905 chr10 50316825 50317035 + 8.48 0.000 intron (NM_147156, intron 8 of 10) intron (NM_147156, intron 8 of 10) -68320 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr11-7079 chr11 121364680 121364890 + 8.48 0.000 Intergenic MLT2A2|LTR|ERVL 71917 NM_001024956 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr8-4253 chr8 92114663 92114873 + 8.48 0.000 Intergenic L1MA4A|LINE|L1 -11383 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr4-8696 chr4 181464181 181464391 + 8.48 0.000 Intergenic L1MB7|LINE|L1 -199257 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr15-1290 chr15 25173288 25173498 + 8.48 0.000 TTS (NR_003294) TTS (NR_003294) 758 NR_003294 100033437 NR_003294 ENSG00000199712 SNORD115-2 HBII-52-2 small nucleolar RNA, C/D box 115-2 snoRNA chr18-2677 chr18 56539615 56539825 + 8.48 0.000 Intergenic Intergenic 98872 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr3-5619 chr3 9853573 9853783 + 8.48 0.000 Intergenic LTR5_Hs|LTR|ERVK -9619 NM_173659 285367 Hs.33719 NM_173659 ENSG00000156990 RPUSD3 - RNA pseudouridine synthase D3 protein-coding chr3-6359 chr3 86588887 86589097 + 8.48 0.000 Intergenic AluY|SINE|Alu 107049 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr4-6894 chr4 13990715 13990925 + 8.48 0.000 Intergenic Intergenic -121148 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr5-7931 chr5 79171578 79171788 + 8.48 0.000 Intergenic Intergenic 59874 NM_001713 635 Hs.80756 NM_001713 ENSG00000145692 BHMT BHMT1|HEL-S-61p betaine--homocysteine S-methyltransferase protein-coding chr20-1324 chr20 63312414 63312624 + 8.48 0.000 exon (NM_020882, exon 15 of 36) exon (NM_020882, exon 15 of 36) 19333 NM_020882 57642 Hs.271285 NM_020882 ENSG00000101203 COL20A1 - collagen type XX alpha 1 chain protein-coding chr10-4141 chr10 78903626 78903836 + 8.48 0.000 Intergenic Intergenic 163717 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr2-9353 chr2 227183654 227183864 + 8.48 0.000 intron (NM_000091, intron 1 of 51) intron (NM_000091, intron 1 of 51) 19194 NM_000091 1285 Hs.570065 NM_000091 ENSG00000169031 COL4A3 ATS2|ATS3 collagen type IV alpha 3 chain protein-coding chr2-4104 chr2 149617514 149617724 + 8.48 0.000 intron (NR_110240, intron 1 of 2) intron (NR_110240, intron 1 of 2) -29844 NM_015702 27249 Hs.5324 NM_015702 ENSG00000168288 MMADHC C2orf25|CL25022|cblD metabolism of cobalamin associated D protein-coding chrX-1491 chrX 147825864 147826074 + 8.48 0.000 Intergenic HAL1|LINE|L1 85848 NR_024499 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr9-4363 chr9 132842522 132842732 + 8.48 0.000 intron (NM_001317959, intron 6 of 14) MLT1E1A|LTR|ERVL-MaLR -35717 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr3-3951 chr3 50473914 50474124 + 8.48 0.000 intron (NM_001291101, intron 2 of 37) intron (NM_001291101, intron 2 of 37) 29615 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr6-2751 chr6 110944699 110944909 + 8.48 0.000 Intergenic Intergenic -13902 NM_138408 112495 Hs.418520 NM_138408 ENSG00000155115 GTF3C6 C6orf51|TFIIIC35|bA397G5.3 general transcription factor IIIC subunit 6 protein-coding chr21-1822 chr21 39950417 39950627 + 8.48 0.000 Intergenic HAL1|LINE|L1 83084 NM_006198 5121 Hs.80296 NM_006198 ENSG00000183036 PCP4 PEP-19 Purkinje cell protein 4 protein-coding chr12-4574 chr12 30165625 30165835 + 8.48 0.000 Intergenic Intergenic -380971 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr4-8450 chr4 155295182 155295392 + 8.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -58929 NR_125937 102724776 Hs.61271 NR_125937 ENSG00000250910 LOC102724776 - uncharacterized LOC102724776 ncRNA chr18-2425 chr18 22671146 22671356 + 8.48 0.000 Intergenic L1MCb|LINE|L1 115586 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr16-3880 chr16 72637245 72637455 + 8.48 0.000 intron (NR_159372, intron 1 of 7) LTR64|LTR|ERV1 27620 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr6-7558 chr6 71726124 71726334 + 8.48 0.000 Intergenic Intergenic -160474 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr1-16504 chr1 229957400 229957610 + 8.48 0.000 Intergenic L1PB1|LINE|L1 -45212 NR_135116 101927532 Hs.40183 NR_135116 ENSG00000228058 LINC01736 - long intergenic non-protein coding RNA 1736 ncRNA chr10-4494 chr10 84348912 84349122 + 8.48 0.000 intron (NM_018999, intron 1 of 10) L1MC4|LINE|L1 20428 NM_001284240 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr14-3556 chr14 104997011 104997221 + 8.48 0.000 Intergenic L1MEf|LINE|L1 10837 NM_001364170 122616 Hs.27183 NM_174891 ENSG00000140104 CLBA1 C14orf79 clathrin binding box of aftiphilin containing 1 protein-coding chr2-5767 chr2 222264860 222265070 + 8.48 0.000 intron (NM_181457, intron 4 of 7) L2c|LINE|L2 -33182 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr16-3550 chr16 51392913 51393123 + 8.48 0.000 intron (NR_039672, intron 6 of 6) intron (NR_039672, intron 6 of 6) -241746 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr6-7101 chr6 34425348 34425558 + 8.48 0.000 intron (NM_001202470, intron 1 of 8) intron (NM_001202470, intron 1 of 8) 616 NM_001014 6204 Hs.406620 NM_001014 ENSG00000124614 RPS10 DBA9|S10 ribosomal protein S10 protein-coding chr17-3628 chr17 2263900 2264110 + 8.48 0.000 intron (NM_017575, intron 8 of 18) intron (NM_017575, intron 8 of 18) 2180 NM_001256827 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr12-5843 chr12 44767575 44767785 + 8.48 0.000 intron (NM_006159, intron 10 of 20) L1MC4a|LINE|L1 107981 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr3-8120 chr3 21039314 21039524 + 8.48 0.000 Intergenic Intergenic -366307 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr1-14893 chr1 82249003 82249213 + 8.48 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 446655 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr3-4358 chr3 185178739 185178949 + 8.48 0.000 intron (NR_038990, intron 2 of 6) L2a|LINE|L2 15943 NR_038990 339926 Hs.567848 NR_038990 ENSG00000223358 EHHADH-AS1 - EHHADH antisense RNA 1 ncRNA chr13-2581 chr13 70814818 70815028 + 8.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR -200218 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr1-5550 chr1 228259627 228259837 + 8.48 0.000 exon (NM_001271223, exon 17 of 116) exon (NM_001271223, exon 17 of 116) -46068 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr8-5062 chr8 30169376 30169586 + 8.48 0.000 intron (NM_006571, intron 2 of 6) intron (NM_006571, intron 2 of 6) 13112 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr22-4219 chr22 46397260 46397470 + 8.48 0.000 intron (NM_014246, intron 12 of 34) AluSz|SINE|Alu 61651 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr13-2961 chr13 51425599 51425809 + 8.48 0.000 intron (NM_001306091, intron 4 of 19) MamRTE1|LINE|RTE-BovB 27332 NM_001039938 26512 Hs.439440 NM_012141 ENSG00000102786 INTS6 DBI-1|DDX26|DDX26A|DICE1|HDB|INT6|Notchl2 integrator complex subunit 6 protein-coding chr2-7303 chr2 239627862 239628072 + 8.48 0.000 Intergenic L2c|LINE|L2 -134893 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr2-11963 chr2 26792806 26793016 + 8.48 0.000 intron (NM_001809, intron 3 of 4) intron (NM_001809, intron 3 of 4) 6855 NM_001809 1058 Hs.1594 NM_001809 ENSG00000115163 CENPA CENP-A|CenH3 centromere protein A protein-coding chr1-4852 chr1 28437334 28437544 + 8.48 0.000 promoter-TSS (NM_023923) promoter-TSS (NM_023923) -711 NM_023923 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr6-7970 chr6 113362984 113363194 + 8.48 0.000 Intergenic Intergenic 70358 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr3-4297 chr3 159732797 159733007 + 8.48 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 35710 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr11-8478 chr11 118201735 118201945 + 8.48 0.000 intron (NM_001098526, intron 6 of 9) L2c|LINE|L2 11106 NM_153206 120425 Hs.16291 NM_153206 ENSG00000160593 JAML AMICA|AMICA1|CREA7-1|CREA7-4|Gm638 junction adhesion molecule like protein-coding chr16-4022 chr16 812015 812225 + 8.48 0.000 intron (NM_001013638, intron 2 of 2) intron (NM_001013638, intron 2 of 2) 6677 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr17-5265 chr17 19672467 19672677 + 8.48 0.000 intron (NM_001369138, intron 10 of 10) intron (NM_001369138, intron 10 of 10) 23821 NM_000382 224 Hs.499886 NM_000382 ENSG00000072210 ALDH3A2 ALDH10|FALDH|SLS aldehyde dehydrogenase 3 family member A2 protein-coding chr11-5606 chr11 116612248 116612458 + 8.48 0.000 Intergenic Intergenic -27069 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr15-4281 chr15 37129217 37129427 + 8.48 0.000 Intergenic L2c|LINE|L2 -28011 NM_001220482 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr10-8604 chr10 97029596 97029806 + 8.48 0.000 intron (NM_003061, intron 25 of 36) L1MB4|LINE|L1 -73055 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr1-4549 chr1 64329411 64329621 + 8.48 0.000 Intergenic MST-int|LTR|ERVL-MaLR 125893 NM_001366234 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding chr4-4498 chr4 59960797 59961007 + 8.48 0.000 Intergenic HERV16-int|LTR|ERVL 947329 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr10-2821 chr10 17453355 17453565 + 8.48 0.000 intron (NM_001004470, intron 2 of 7) CpG 1135 NM_001004470 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr9-4550 chr9 84925477 84925687 + 8.48 0.000 intron (NM_001018064, intron 13 of 17) intron (NM_001018064, intron 13 of 17) 219681 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr10-4064 chr10 36082006 36082216 + 8.48 0.000 Intergenic L1PA11|LINE|L1 303809 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr11-8914 chr11 16965306 16965516 + 8.48 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -39389 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr2-14582 chr2 231991753 231991963 + 8.48 0.000 intron (NR_046477, intron 1 of 18) L2b|LINE|L2 30145 NR_046476 129563 Hs.732236 NM_152383 ENSG00000144535 DIS3L2 FAM6A|PRLMNS|hDIS3L2 DIS3 like 3'-5' exoribonuclease 2 protein-coding chr11-5107 chr11 120033719 120033929 + 8.48 0.000 Intergenic Intergenic 95029 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr6-2393 chr6 146990368 146990578 + 8.48 0.000 intron (NR_034115, intron 6 of 10) intron (NR_034115, intron 6 of 10) -168452 NR_132442 106182249 Hs.575390 NR_132442 ENSG00000196634 LUADT1 - lung adenocarcinoma associated transcript 1 ncRNA chr8-3693 chr8 18262032 18262242 + 8.48 0.000 Intergenic LTR49-int|LTR|ERV1 40469 NM_001160174 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr6-3973 chr6 107723738 107723948 + 8.48 0.000 intron (NM_001286408, intron 4 of 6) L1MB8|LINE|L1 8307 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr20-1532 chr20 46558543 46558753 + 8.48 0.000 3' UTR (NM_022829, exon 13 of 13) 3' UTR (NM_022829, exon 13 of 13) -7994 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr5-578 chr5 1867217 1867427 + 8.48 0.000 Intergenic Intergenic -10754 NR_104602 101929034 Hs.128032 NR_104602 ENSG00000250417 LINC02116 - long intergenic non-protein coding RNA 2116 ncRNA chr1-16164 chr1 206065419 206065629 + 8.48 0.000 intron (NM_001007544, intron 1 of 5) intron (NM_001007544, intron 1 of 5) 12351 NM_001007544 440712 Hs.662248 NM_001007544 ENSG00000263961 RHEX C1orf186 regulator of hemoglobinization and erythroid cell expansion protein-coding chr11-3466 chr11 73625781 73625991 + 8.48 0.000 Intergenic Intergenic -20695 NM_001130033 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr4-4457 chr4 54358265 54358475 + 8.48 0.000 Intergenic Intergenic 25478 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr16-6880 chr16 84260692 84260902 + 8.48 0.000 Intergenic Intergenic -21047 NM_172347 93107 Hs.335877 NM_133490 ENSG00000168418 KCNG4 KV6.3|KV6.4 potassium voltage-gated channel modifier subfamily G member 4 protein-coding chr17-3313 chr17 63909772 63909982 + 8.48 0.000 exon (NM_001318, exon 4 of 4) exon (NM_001318, exon 4 of 4) 1381 NM_001321069 1444 Hs.654390 NM_001318 ENSG00000204414 CSHL1 CS-5|CSHP1|CSL|GHB4|hCS-L chorionic somatomammotropin hormone like 1 protein-coding chr12-2275 chr12 108525797 108526007 + 8.48 0.000 intron (NM_014706, intron 16 of 18) MIRb|SINE|MIR 10625 NM_007076 11153 Hs.661891 NM_007076 ENSG00000198855 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding chr6-3704 chr6 166769032 166769242 + 8.48 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 93388 NM_001318937 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr5-3478 chr5 171554812 171555022 + 8.48 0.000 Intergenic Intergenic 135270 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr4-3768 chr4 92514587 92514797 + 8.48 0.000 intron (NM_001286838, intron 1 of 14) MamRTE1|LINE|RTE-BovB 210293 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr5-6586 chr5 27143214 27143424 + 8.48 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -104733 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr5-2844 chr5 65723052 65723262 + 8.48 0.000 intron (NM_020726, intron 1 of 12) intron (NM_020726, intron 1 of 12) 952 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chr3-4383 chr3 192728632 192728842 + 8.48 0.000 Intergenic Tigger14a|DNA|TcMar-Tigger -1196 NM_004113 2257 Hs.390250 NM_004113 ENSG00000114279 FGF12 EIEE47|FGF12B|FHF1 fibroblast growth factor 12 protein-coding chr10-7901 chr10 50240831 50241041 + 8.48 0.000 intron (NM_001143974, intron 3 of 18) MLT1F1|LTR|ERVL-MaLR 7674 NM_019893 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr10-5330 chr10 71392259 71392469 + 8.48 0.000 Intergenic Intergenic -4556 NM_052836 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr18-1759 chr18 9174026 9174236 + 8.48 0.000 intron (NM_001204056, intron 1 of 11) L1PREC2|LINE|L1 36568 NM_001204056 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding chr4-4814 chr4 107430437 107430647 + 8.48 0.000 Intergenic L2a|LINE|L2 289692 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr6-7480 chr6 60641757 60641967 + 8.48 0.000 Intergenic Intergenic -932268 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr2-10417 chr2 194927165 194927375 + 8.48 0.000 Intergenic Intergenic 196675 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr22-2642 chr22 34382449 34382659 + 8.48 0.000 Intergenic Intergenic -459666 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr11-3407 chr11 3536854 3537064 + 8.48 0.000 intron (NR_126335, intron 1 of 2) THE1B-int|LTR|ERVL-MaLR 35028 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA chr1-2354 chr1 33307577 33307787 + 8.48 0.000 intron (NM_001080438, intron 4 of 4) (CCTCA)n|Simple_repeat|Simple_repeat 13416 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding chr7-5367 chr7 31171300 31171510 + 8.48 0.000 Intergenic MIR|SINE|MIR 118944 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr15-2247 chr15 27863228 27863438 + 8.48 0.000 intron (NM_001300984, intron 20 of 22) intron (NM_001300984, intron 20 of 22) 235982 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr12-4263 chr12 117087776 117087986 + 8.48 0.000 intron (NR_031766, intron 1 of 7) intron (NR_031766, intron 1 of 7) 11535 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr10-3287 chr10 73884 74094 + 8.48 0.000 Intergenic CpG -24751 NM_177987 347688 Hs.532659 NM_177987 ENSG00000261456 TUBB8 OOMD|OOMD2|bA631M21.2 tubulin beta 8 class VIII protein-coding chr4-4397 chr4 42323590 42323800 + 8.48 0.000 intron (NR_134668, intron 1 of 1) MLT1H2-int|LTR|ERVL-MaLR 67573 NR_134668 105374428 Hs.245131 NR_134668 ENSG00000250781 LOC105374428 - uncharacterized LOC105374428 ncRNA chr1-10947 chr1 212224314 212224524 + 8.48 0.000 TTS (NR_125983) TTS (NR_125983) 10317 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr11-10372 chr11 111834757 111834967 + 8.48 0.000 intron (NR_147984, intron 13 of 15) MamTip2|DNA|hAT-Tip100 36419 NM_001352419 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chr4-6907 chr4 14878470 14878680 + 8.48 0.000 intron (NR_126435, intron 1 of 6) intron (NR_126435, intron 1 of 6) 9594 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr15-4031 chr15 61295531 61295741 + 8.48 0.000 Intergenic Intergenic -66334 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr14-4731 chr14 60490699 60490909 + 8.48 0.000 Intergenic Intergenic -4741 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding chr18-2392 chr18 286710 286920 + 8.48 0.000 Intergenic Intergenic -18768 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr22-1289 chr22 38021708 38021918 + 8.48 0.000 intron (NM_001301130, intron 5 of 5) intron (NM_001301130, intron 5 of 5) 33019 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr7-7569 chr7 121437859 121438069 + 8.48 0.000 Intergenic Intergenic -41596 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr7-5459 chr7 40232137 40232347 + 8.48 0.000 intron (NM_024728, intron 6 of 14) intron (NM_024728, intron 6 of 14) 97266 NM_001193312 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding chr6-5690 chr6 114607226 114607436 + 8.48 0.000 Intergenic Intergenic -544454 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr5-6509 chr5 1224485 1224695 + 8.48 0.000 promoter-TSS (NM_182632) promoter-TSS (NM_182632) -791 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding chr17-5991 chr17 77610894 77611104 + 8.48 0.000 Intergenic Intergenic 64058 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr20-1974 chr20 39652222 39652432 + 8.48 0.000 Intergenic Intergenic -352134 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr4-2792 chr4 25705651 25705861 + 8.48 0.000 Intergenic Intergenic 49292 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr6-7057 chr6 27378588 27378798 + 8.48 0.000 intron (NM_001322288, intron 1 of 3) LTR7|LTR|ERV1 -3319 NR_024553 7754 Hs.8198 NR_002722 ZNF204P ZNF184-Lp|ZNF204|ZNF315P|b24o18.1 zinc finger protein 204, pseudogene pseudo chr2-8185 chr2 88054632 88054842 + 8.48 0.000 intron (NM_001304526, intron 1 of 3) MER67B|LTR|ERV1 1046 NM_001304526 51315 Hs.469254 NM_016618 ENSG00000172086 KRCC1 CHBP2 lysine rich coiled-coil 1 protein-coding chr10-8800 chr10 107567484 107567694 + 8.48 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -402883 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr2-12501 chr2 63451080 63451290 + 8.48 0.000 intron (NR_148704, intron 7 of 18) L1PA5|LINE|L1 -13178 NM_001042692 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr1-8982 chr1 10171426 10171636 + 8.48 0.000 intron (NM_006048, intron 24 of 26) AluJb|SINE|Alu -39039 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr10-5307 chr10 70397661 70397871 + 8.48 0.000 Intergenic MIRb|SINE|MIR -6379 NM_004096 1979 Hs.621200 NM_004096 ENSG00000148730 EIF4EBP2 4EBP2|PHASII eukaryotic translation initiation factor 4E binding protein 2 protein-coding chr8-7056 chr8 115121720 115121930 + 8.48 0.000 Intergenic Intergenic 546188 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8-3417 chr8 70603603 70603813 + 8.48 0.000 intron (NM_001317804, intron 2 of 11) AluSx1|SINE|Alu 3961 NM_001317805 23471 Hs.491988 NM_014294 ENSG00000067167 TRAM1 PNAS8|TRAM|TRAMP translocation associated membrane protein 1 protein-coding chr6-4280 chr6 12653437 12653647 + 8.48 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -63225 NM_001322308 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr4-5130 chr4 152344377 152344587 + 8.48 0.000 intron (NM_018315, intron 3 of 10) intron (NM_018315, intron 3 of 10) 6827 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr10-5707 chr10 100791269 100791479 + 8.48 0.000 intron (NM_003990, intron 6 of 10) (TGTGCA)n|Simple_repeat|Simple_repeat 45663 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr17-4327 chr17 82920775 82920985 + 8.48 0.000 intron (NM_005993, intron 24 of 38) intron (NM_005993, intron 24 of 38) -80858 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr3-9702 chr3 65704295 65704505 + 8.48 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -189416 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr12-2517 chr12 92505384 92505594 + 8.48 0.000 Intergenic Intergenic 38810 NR_144532 100507616 Hs.339918 NR_144532 LINC02397 - long intergenic non-protein coding RNA 2397 ncRNA chr8-3718 chr8 20731829 20732039 + 8.48 0.000 Intergenic Intergenic -117008 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr1-5895 chr1 8460242 8460452 + 8.48 0.000 intron (NM_001042681, intron 11 of 22) intron (NM_001042681, intron 11 of 22) 34566 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr13-1202 chr13 50419674 50419884 + 8.48 0.000 intron (NR_109974, intron 3 of 6) intron (NR_109974, intron 3 of 6) 107670 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr19-6859 chr19 43747283 43747493 + 8.48 0.000 intron (NM_019108, intron 5 of 13) intron (NM_019108, intron 5 of 13) 7574 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr1-10502 chr1 165726041 165726251 + 8.48 0.000 non-coding (NR_045818, exon 7 of 7) non-coding (NR_045818, exon 7 of 7) 27396 NR_036683 440700 Hs.568703 NR_036683 ENSG00000215838 LOC440700 - carbonic anhydrase 14 pseudogene pseudo chr14-3229 chr14 74912249 74912459 + 8.48 0.000 intron (NR_163406, intron 3 of 11) intron (NR_163406, intron 3 of 11) 10088 NM_031464 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding chr6-4691 chr6 54946953 54947163 + 8.48 0.000 Intergenic Intergenic 100287 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr10-5731 chr10 101295706 101295916 + 8.48 0.000 Intergenic Intergenic -32261 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr6-7187 chr6 38633252 38633462 + 8.48 0.000 intron (NM_052893, intron 1 of 11) MIRb|SINE|MIR 6572 NM_052893 114781 Hs.603858 NM_052893 ENSG00000183826 BTBD9 dJ322I12.1 BTB domain containing 9 protein-coding chr11-9218 chr11 38815856 38816066 + 8.48 0.000 Intergenic Intergenic 167103 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr10-1808 chr10 119640970 119641180 + 8.48 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -10295 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr7-7240 chr7 26391887 26392097 + 8.48 0.000 intron (NR_136272, intron 1 of 1) intron (NR_136272, intron 1 of 1) -6577 NR_148500 441204 Hs.587432 NR_015364 ENSG00000214870 LOC441204 - uncharacterized LOC441204 ncRNA chr4-7245 chr4 46376816 46377026 + 8.48 0.000 intron (NM_001114175, intron 2 of 8) SVA_D|Retroposon|SVA 12458 NM_001114175 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr11-5677 chr11 130366496 130366706 + 8.48 0.000 intron (NR_148980, intron 1 of 6) AluJr4|SINE|Alu 51608 NR_148980 646383 Hs.155288 NM_001039787 ENSG00000175773 ZBTB44-DT - ZBTB44 divergent transcript ncRNA chr2-9551 chr2 239655041 239655251 + 8.48 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -107714 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr20-4131 chr20 43182062 43182272 + 8.48 0.000 intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) 7739 NM_133170 11122 Hs.526879 NM_007050 ENSG00000196090 PTPRT RPTPrho protein tyrosine phosphatase receptor type T protein-coding chr11-10670 chr11 127708060 127708270 + 8.48 0.000 Intergenic HAL1|LINE|L1 437095 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr10-2314 chr10 44369676 44369886 + 8.48 0.000 TTS (NM_000609) TTS (NM_000609) 15316 NM_001033886 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr15-3619 chr15 71374661 71374871 + 8.48 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -172470 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr14-3620 chr14 58331130 58331340 + 8.48 0.000 intron (NM_002892, intron 11 of 23) intron (NM_002892, intron 11 of 23) 32680 NM_002892 5926 Hs.161000 NM_002892 ENSG00000032219 ARID4A RBBP-1|RBBP1|RBP-1|RBP1 AT-rich interaction domain 4A protein-coding chr6-7562 chr6 71933953 71934163 + 8.48 0.000 intron (NM_001350412, intron 1 of 2) intron (NM_001350412, intron 1 of 2) 47355 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr17-4010 chr17 74928855 74929065 + 8.48 0.000 intron (NM_178160, intron 5 of 6) intron (NM_178160, intron 5 of 6) 4685 NM_178160 92736 Hs.352515 NM_178160 ENSG00000183034 OTOP2 - otopetrin 2 protein-coding chr11-3912 chr11 119935212 119935422 + 8.48 0.000 Intergenic Intergenic 193536 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr15-2400 chr15 63288772 63288982 + 8.48 0.000 intron (NM_031301, intron 4 of 5) intron (NM_031301, intron 4 of 5) 11272 NM_031301 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chrX-3445 chrX 22837343 22837553 + 8.48 0.000 intron (NR_073010, intron 3 of 11) AluYa5|SINE|Alu -162512 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr3-6982 chr3 168061365 168061575 + 8.48 0.000 intron (NM_001308155, intron 1 of 14) L1ME3A|LINE|L1 34454 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr2-10654 chr2 18250957 18251167 + 8.48 0.000 Intergenic Intergenic 309591 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr2-10753 chr2 36780221 36780431 + 8.48 0.000 intron (NM_001177970, intron 9 of 13) intron (NM_001177970, intron 9 of 13) 83619 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr5-5236 chr5 117832603 117832813 + 8.48 0.000 intron (NR_104997, intron 1 of 2) MLT1F2|LTR|ERVL-MaLR 102347 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr4-2403 chr4 80793784 80793994 + 8.48 0.000 intron (NM_001206997, intron 4 of 6) ERVL-E-int|LTR|ERVL -236819 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr2-11261 chr2 176202923 176203133 + 8.48 0.000 Intergenic Intergenic -14070 NR_033979 401022 Hs.98661 NR_033979 ENSG00000224189 HAGLR HOXD-AS1|MIR7704HG|Mdgt HOXD antisense growth-associated long non-coding RNA ncRNA chr3-3207 chr3 194043737 194043947 + 8.48 0.000 intron (NR_136179, intron 1 of 2) intron (NR_136179, intron 1 of 2) 25687 NR_136181 285389 Hs.157102 NR_136179 ENSG00000230102 LINC02028 - long intergenic non-protein coding RNA 2028 ncRNA chr7-7039 chr7 135160132 135160342 + 8.48 0.000 intron (NM_018295, intron 1 of 1) L1ME4a|LINE|L1 9237 NM_001243755 78996 Hs.643113 NM_024033 ENSG00000122783 CYREN C7orf49|MRI|MRI-2 cell cycle regulator of NHEJ protein-coding chr1-6399 chr1 10820876 10821086 + 8.48 0.000 Intergenic AluSx1|SINE|Alu -24335 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr13-1627 chr13 51519676 51519886 + 8.48 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -32808 NR_039852 100616423 NR_039852 ENSG00000266611 MIR4703 - microRNA 4703 ncRNA chr5-1692 chr5 81838545 81838755 + 8.48 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -87397 NM_001256732 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr14-4088 chr14 65937504 65937714 + 8.48 0.000 Intergenic MER74A|LTR|ERVL 466507 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr6-2135 chr6 6781228 6781438 + 8.48 0.000 Intergenic Intergenic -158507 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr12-5752 chr12 133208772 133208982 + 8.48 0.000 3' UTR (NM_001165882, exon 6 of 6) 3' UTR (NM_001165882, exon 6 of 6) 26959 NM_001191054 647589 Hs.703008 NM_001191054 ENSG00000227059 ANHX - anomalous homeobox protein-coding chr2-8050 chr2 72095843 72096053 + 8.48 0.000 Intergenic Intergenic 51914 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr6-7665 chr6 84300617 84300827 + 8.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR -73079 NM_001286206 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding chr10-6500 chr10 55585392 55585602 + 8.48 0.000 intron (NM_001354404, intron 2 of 34) AluSx3|SINE|Alu -13545 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding chr9-5021 chr9 26790408 26790618 + 8.48 0.000 Intergenic Intergenic 102289 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr8-5172 chr8 98754122 98754332 + 8.48 0.000 intron (NM_006281, intron 3 of 10) intron (NM_006281, intron 3 of 10) 71444 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr3-10048 chr3 104826139 104826349 + 8.48 0.000 Intergenic Intergenic -540469 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr12-7216 chr12 50359781 50359991 + 8.48 0.000 intron (NM_001145475, intron 3 of 7) L1MB7|LINE|L1 36723 NM_001145475 121006 Hs.133187 NM_001145475 ENSG00000185958 FAM186A - family with sequence similarity 186 member A protein-coding chr9-6194 chr9 93205546 93205756 + 8.48 0.000 intron (NM_006648, intron 1 of 28) intron (NM_006648, intron 1 of 28) 20721 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr17-4176 chr17 4908289 4908499 + 8.48 0.000 Intergenic Intergenic -5296 NM_000080 1145 Hs.654535 NM_000080 ENSG00000108556 CHRNE ACHRE|CMS1D|CMS1E|CMS2A|CMS4A|CMS4B|CMS4C|FCCMS|SCCMS cholinergic receptor nicotinic epsilon subunit protein-coding chr3-6934 chr3 159278633 159278843 + 8.48 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) -3908 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr9-1155 chr9 18473812 18474022 + 8.48 0.000 promoter-TSS (NM_001040272) promoter-TSS (NM_001040272) -236 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr3-8352 chr3 76980114 76980324 + 8.48 0.000 Intergenic Intergenic -59880 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr1-10520 chr1 167896966 167897176 + 8.48 0.000 intron (NM_018417, intron 6 of 32) intron (NM_018417, intron 6 of 32) 17063 NM_018417 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr3-4748 chr3 89099060 89099270 + 8.48 0.000 Intergenic Intergenic -8456 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr1-3770 chr1 3685547 3685757 + 8.48 0.000 intron (NM_001204185, intron 3 of 12) intron (NM_001204185, intron 3 of 12) -5020 NM_001204190 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr22-1672 chr22 45204112 45204322 + 8.48 0.000 intron (NM_001009880, intron 5 of 9) intron (NM_001009880, intron 5 of 9) -3198 NR_031651 100302149 NR_031651 ENSG00000221598 MIR1249 MIRN1249|hsa-mir-1249 microRNA 1249 ncRNA chr18-3140 chr18 40475083 40475293 + 8.48 0.000 Intergenic L2a|LINE|L2 408902 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chrX-3226 chrX 56927406 56927616 + 8.48 0.000 Intergenic L1PREC2|LINE|L1 68030 NR_027139 169981 Hs.522672 NM_001010862 ENSG00000204271 SPIN3 SPIN-3|TDRD27|bA445O16.1 spindlin family member 3 protein-coding chr10-1647 chr10 101018973 101019183 + 8.48 0.000 exon (NM_001195263, exon 8 of 17) exon (NM_001195263, exon 8 of 17) 12051 NM_001195263 79955 Hs.438245 NM_024895 ENSG00000186862 PDZD7 DFNB57|PDZK7 PDZ domain containing 7 protein-coding chr2-9601 chr2 241475618 241475828 + 8.48 0.000 intron (NM_014808, intron 18 of 26) intron (NM_014808, intron 18 of 26) -2182 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr15-1660 chr15 101053396 101053606 + 8.48 0.000 intron (NM_024652, intron 26 of 33) CpG 134144 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr3-4808 chr3 129131822 129132032 + 8.48 0.000 intron (NM_001204890, intron 9 of 12) AluJo|SINE|Alu -9777 NM_001204883 339122 Hs.381132 NM_198490 ENSG00000172780 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding chrX-3531 chrX 53474225 53474435 + 8.48 0.000 Intergenic Intergenic -39954 NM_004493 3028 Hs.171280 NM_004493 ENSG00000072506 HSD17B10 17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|HSD10MD|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1 hydroxysteroid 17-beta dehydrogenase 10 protein-coding chr4-6387 chr4 112270752 112270962 + 8.48 0.000 non-coding (NR_136622, exon 10 of 10) non-coding (NR_136622, exon 10 of 10) 15047 NM_052864 92610 Hs.310640 NM_052864 ENSG00000145365 TIFA T2BP|T6BP|TIFAA TRAF interacting protein with forkhead associated domain protein-coding chr8-4296 chr8 96962466 96962676 + 8.48 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) 315357 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr2-5852 chr2 238117007 238117217 + 8.48 0.000 intron (NM_194312, intron 5 of 8) intron (NM_194312, intron 5 of 8) -10278 NM_001308370 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr13-1406 chr13 26941774 26941984 + 8.48 0.000 Intergenic ERVL-E-int|LTR|ERVL -181093 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr13-4091 chr13 77826087 77826297 + 8.48 0.000 intron (NR_103853, intron 1 of 6) MLT1N2|LTR|ERVL-MaLR 7255 NR_103853 100505518 Hs.742215 NR_103853 EDNRB-AS1 - EDNRB antisense RNA 1 ncRNA chr14-3480 chr14 102068907 102069117 + 8.48 0.000 Intergenic L1M4|LINE|L1 18032 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr3-10541 chr3 139872890 139873100 + 8.48 0.000 Intergenic Intergenic -62190 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chrX-2243 chrX 46378153 46378363 + 8.48 0.000 Intergenic AluSx|SINE|Alu -50584 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr11-4411 chr11 84495790 84496000 + 8.48 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) -178556 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr1-14601 chr1 54378835 54379045 + 8.48 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 27454 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr8-4852 chr8 38555053 38555263 + 8.48 0.000 Intergenic Intergenic -26496 NM_001303531 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr6-6524 chr6 129293679 129293889 + 8.48 0.000 intron (NM_000426, intron 20 of 64) (TAGAGAA)n|Simple_repeat|Simple_repeat 410643 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr3-3816 chr3 21271774 21271984 + 8.48 0.000 Intergenic LTR12C|LTR|ERV1 -133847 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr3-7136 chr3 184864259 184864469 + 8.48 0.000 intron (NM_001009921, intron 15 of 46) L1MEc|LINE|L1 51857 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr16-4244 chr16 20879701 20879911 + 8.48 0.000 intron (NM_173475, intron 1 of 2) intron (NM_173475, intron 1 of 2) -20076 NM_001369631 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chrX-3377 chrX 151267523 151267733 + 8.48 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -89792 NR_135300 100128688 Hs.460993 NR_135300 ENSG00000234696 GPR50-AS1 - GPR50 antisense RNA 1 ncRNA chr6-2593 chr6 96315370 96315580 + 8.48 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -206331 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr20-1346 chr20 17249448 17249658 + 8.48 0.000 intron (NM_001201529, intron 1 of 10) L1MB3|LINE|L1 22513 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr13-3317 chr13 54536312 54536522 + 8.48 0.000 Intergenic Intergenic -224369 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chrX-5279 chrX 140417263 140417473 + 8.48 0.000 Intergenic Intergenic 87692 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr9-7833 chr9 82986009 82986219 + 8.48 0.000 intron (NM_152573, intron 16 of 16) L2b|LINE|L2 77028 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr11-8542 chr11 131550117 131550327 + 8.48 0.000 intron (NM_001352003, intron 1 of 8) AluJr|SINE|Alu -9355 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr18-3264 chr18 50689984 50690194 + 8.48 0.000 intron (NM_002747, intron 2 of 5) intron (NM_002747, intron 2 of 5) 129927 NM_031939 83876 Hs.30495 NM_031939 ENSG00000134042 MRO B29|C18orf3 maestro protein-coding chr12-6039 chr12 111122115 111122325 + 8.48 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 22216 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr2-5459 chr2 127154101 127154311 + 8.48 0.000 Intergenic Intergenic -47052 NM_139345 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr9-4331 chr9 127629236 127629446 + 8.48 0.000 intron (NM_001032221, intron 1 of 18) L2a|LINE|L2 17064 NM_001032221 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr12-3778 chr12 52757826 52758036 + 8.48 0.000 Intergenic Intergenic 19414 NM_015848 51350 Hs.654392 NM_015848 ENSG00000185069 KRT76 HUMCYT2A|KRT2B|KRT2P keratin 76 protein-coding chr8-3364 chr8 48075231 48075441 + 8.48 0.000 Intergenic Intergenic 66905 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr1-16426 chr1 226335078 226335288 + 8.48 0.000 Intergenic Intergenic -25416 NM_001270410 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr10-6259 chr10 77585071 77585281 + 8.48 0.000 intron (NM_001271519, intron 1 of 28) L2c|LINE|L2 52632 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr15-2972 chr15 50908673 50908883 + 8.48 0.000 promoter-TSS (NM_007347) promoter-TSS (NM_007347) 95 NM_001252127 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr11-3043 chr11 3809350 3809560 + 8.48 0.000 intron (NR_144430, intron 1 of 3) intron (NR_144430, intron 1 of 3) 895 NR_144428 27315 Hs.133968 NM_014489 ENSG00000148985 PGAP2 CWH43-N|FRAG1|HPMRS3|MRT17|MRT21 post-GPI attachment to proteins 2 protein-coding chr7-2880 chr7 127392022 127392232 + 8.48 0.000 5' UTR (NM_176814, exon 1 of 6) 5' UTR (NM_176814, exon 1 of 6) 581 NM_176814 168850 Hs.159006 NM_176814 ENSG00000048405 ZNF800 - zinc finger protein 800 protein-coding chr2-9209 chr2 217360774 217360984 + 8.48 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 78146 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr13-3973 chr13 63632434 63632644 + 8.48 0.000 Intergenic ERVL-B4-int|LTR|ERVL -104896 NR_002171 283491 Hs.363054 NR_002171 OR7E156P - olfactory receptor family 7 subfamily E member 156 pseudogene pseudo chr8-4502 chr8 119769863 119770073 + 8.48 0.000 intron (NM_003184, intron 18 of 25) AluSc8|SINE|Alu 62873 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr20-2743 chr20 50511272 50511482 + 8.48 0.000 intron (NM_001278618, intron 1 of 8) L2a|LINE|L2 994 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr19-4720 chr19 19201512 19201722 + 8.48 0.000 3' UTR (NM_176880, exon 5 of 5) 3' UTR (NM_176880, exon 5 of 5) 1797 NM_001300945 126382 Hs.708153 NM_176880 ENSG00000184162 NR2C2AP TRA16 nuclear receptor 2C2 associated protein protein-coding chr9-6524 chr9 109911760 109911970 + 8.48 0.000 intron (NM_053016, intron 3 of 6) intron (NM_053016, intron 3 of 6) 131667 NM_053016 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr3-7803 chr3 89969051 89969261 + 8.48 0.000 Intergenic Intergenic 861535 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr11-3158 chr11 61345006 61345216 + 8.48 0.000 intron (NM_001351977, intron 13 of 17) intron (NM_001351977, intron 13 of 17) 11883 NM_015533 26007 Hs.6278 NM_015533 ENSG00000149476 TKFC DAK|NET45 triokinase and FMN cyclase protein-coding chrX-2277 chrX 50007938 50008148 + 8.48 0.000 promoter-TSS (NR_029850) promoter-TSS (NR_029850) -388 NR_030224 574502 NR_030224 ENSG00000207785 MIR500A MIR500|MIRN500|hsa-mir-500|hsa-mir-500a|mir-500a microRNA 500a ncRNA chr15-2696 chr15 84588713 84588923 + 8.48 0.000 Intergenic AluSx1|SINE|Alu -12191 NM_017894 54993 Hs.594023 NM_017894 ENSG00000176371 ZSCAN2 ZFP29|ZNF854 zinc finger and SCAN domain containing 2 protein-coding chr17-8348 chr17 73821273 73821483 + 8.48 0.000 intron (NR_027146, intron 2 of 3) intron (NR_027146, intron 2 of 3) 7159 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr7-5588 chr7 48504655 48504865 + 8.48 0.000 intron (NM_152701, intron 48 of 61) L3|LINE|CR1 333302 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr2-9308 chr2 223386476 223386686 + 8.48 0.000 Intergenic L2c|LINE|L2 215780 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr7-1341 chr7 30134785 30134995 + 8.48 0.000 promoter-TSS (NM_152793) promoter-TSS (NM_152793) -96 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr7-7685 chr7 155406750 155406960 + 8.48 0.000 Intergenic Intergenic 24779 NR_147174 100286906 Hs.568111 NR_147174 LOC100286906 - uncharacterized LOC100286906 ncRNA chr22-1600 chr22 19817553 19817763 + 8.48 0.000 intron (NM_053004, intron 4 of 7) L1ME3B|LINE|L1 37216 NM_024627 79680 Hs.105642 NM_024627 ENSG00000215012 RTL10 BOP|C22orf29 retrotransposon Gag like 10 protein-coding chr15-1984 chr15 41949351 41949561 + 8.48 0.000 intron (NM_139265, intron 2 of 5) intron (NM_139265, intron 2 of 5) 23101 NM_139265 30844 Hs.143703 NM_139265 ENSG00000103966 EHD4 PAST4 EH domain containing 4 protein-coding chr19-2392 chr19 7488864 7489074 + 8.48 0.000 promoter-TSS (NM_001270539) promoter-TSS (NM_001270539) 66 NM_080662 92960 Hs.515100 NM_080662 ENSG00000104883 PEX11G - peroxisomal biogenesis factor 11 gamma protein-coding chr11-7067 chr11 120827201 120827411 + 8.48 0.000 intron (NM_001282470, intron 5 of 19) intron (NM_001282470, intron 5 of 19) -8191 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr17-7722 chr17 33194764 33194974 + 8.48 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 98119 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr3-4085 chr3 101809332 101809542 + 8.48 0.000 intron (NM_001348997, intron 6 of 6) intron (NM_001348997, intron 6 of 6) -18553 NM_001005474 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr20-2551 chr20 36256382 36256592 + 8.48 0.000 3' UTR (NM_001271874, exon 4 of 4) 3' UTR (NM_001271874, exon 4 of 4) 20009 NM_001271874 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr20-1535 chr20 49283930 49284140 + 8.48 0.000 intron (NR_003604, intron 4 of 4) HERVIP10B3-int|LTR|ERV1 3352 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr6-8348 chr6 148080471 148080681 + 8.48 0.000 Intergenic Intergenic -191752 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chrX-2107 chrX 25592246 25592456 + 8.48 0.000 Intergenic Intergenic -545992 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr1-13914 chr1 22400115 22400325 + 8.48 0.000 Intergenic L2b|LINE|L2 -51631 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr2-8383 chr2 112183601 112183811 + 8.48 0.000 intron (NM_001128165, intron 5 of 6) MER117|DNA|hAT-Charlie 45321 NM_153214 129804 Hs.437696 NM_153214 ENSG00000144152 FBLN7 TM14 fibulin 7 protein-coding chr9-3508 chr9 26662628 26662838 + 8.48 0.000 Intergenic Intergenic 230069 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr17-4280 chr17 68763603 68763813 + 8.48 0.000 Intergenic Intergenic 135554 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr12-3876 chr12 112654969 112655179 + 8.48 0.000 intron (NM_001347952, intron 1 of 21) Tigger3|DNA|TcMar-Tigger 40102 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr9-5682 chr9 124034005 124034215 + 8.48 0.000 TTS (NM_004789) TTS (NM_004789) 22342 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr16-1668 chr16 69106040 69106250 + 8.48 0.000 promoter-TSS (NM_138612) promoter-TSS (NM_138612) -77 NM_138612 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr5-3717 chr5 16427212 16427422 + 8.48 0.000 intron (NR_104625, intron 7 of 8) FLAM_C|SINE|Alu 13785 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA chr9-6711 chr9 3637171 3637381 + 8.48 0.000 Intergenic L2c|LINE|L2 -30810 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chrX-1893 chrX 134282887 134283097 + 8.48 0.000 Intergenic MER1A|DNA|hAT-Charlie 45779 NM_001353453 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr1-10807 chr1 202825743 202825953 + 8.48 0.000 non-coding (NR_038135, exon 3 of 3) non-coding (NR_038135, exon 3 of 3) 5591 NR_038135 641515 Hs.23459 NR_038135 ENSG00000184774 MGAT4EP - MGAT4 family member E, pseudogene pseudo chr2-11230 chr2 164594025 164594235 + 8.48 0.000 intron (NM_004490, intron 2 of 13) intron (NM_004490, intron 2 of 13) -25635 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr9-5373 chr9 91615635 91615845 + 8.48 0.000 Intergenic L1MC4|LINE|L1 -20511 NR_037472 100500821 NR_037472 ENSG00000266855 MIR3910-1 mir-3910-1 microRNA 3910-1 ncRNA chr16-5821 chr16 616597 616807 + 8.48 0.000 intron (NM_021168, intron 1 of 5) intron (NM_021168, intron 1 of 5) -14283 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr21-1672 chr21 26924259 26924469 + 8.48 0.000 exon (NM_007038, exon 8 of 8) exon (NM_007038, exon 8 of 8) -29597 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 - microRNA 4759 ncRNA chr12-7068 chr12 41828071 41828281 + 8.48 0.000 Intergenic ERVL-E-int|LTR|ERVL 63987 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr10-6513 chr10 63367204 63367414 + 8.48 0.000 intron (NM_001322258, intron 2 of 24) AluSp|SINE|Alu 5739 NR_031566 100302150 NR_031566 ENSG00000221063 MIR1296 MIRN1296|hsa-mir-1296|mir-1296 microRNA 1296 ncRNA chr13-1384 chr13 108733216 108733426 + 8.48 0.000 intron (NM_015011, intron 4 of 34) MIR|SINE|MIR 103710 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr11-8978 chr11 21272051 21272261 + 8.48 0.000 intron (NM_201551, intron 14 of 18) L1PA4|LINE|L1 602570 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr4-4982 chr4 133594527 133594737 + 8.48 0.000 Intergenic Intergenic 445338 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr8-5260 chr8 134315672 134315882 + 8.48 0.000 Intergenic Intergenic -282294 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr22-2854 chr22 44760471 44760681 + 8.48 0.000 intron (NM_181335, intron 1 of 11) intron (NM_181335, intron 1 of 11) 8018 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr8-2479 chr8 138767764 138767974 + 8.48 0.000 intron (NM_152888, intron 16 of 64) intron (NM_152888, intron 16 of 64) 146172 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr22-3316 chr22 19544067 19544277 + 8.48 0.000 Intergenic Intergenic -18835 NM_001363067 7122 Hs.505337 NM_003277 ENSG00000184113 CLDN5 AWAL|BEC1|CPETRL1|TMDVCF|TMVCF claudin 5 protein-coding chr2-11114 chr2 132558602 132558812 + 8.48 0.000 intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 111498 NM_001321235 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr7-1932 chr7 43113902 43114112 + 8.48 0.000 intron (NM_001287059, intron 1 of 27) intron (NM_001287059, intron 1 of 27) 1360 NM_001287059 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr2-9177 chr2 214556978 214557188 + 8.48 0.000 intron (NR_159945, intron 4 of 4) MIR|SINE|MIR 46901 NR_047698 100885780 Hs.665982 NR_047698 ENSG00000224257 VWC2L-IT1 - VWC2L intronic transcript 1 ncRNA chr1-9141 chr1 19097620 19097830 + 8.48 0.000 intron (NM_020765, intron 90 of 105) intron (NM_020765, intron 90 of 105) 112541 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr3-6478 chr3 109894281 109894491 + 8.48 0.000 Intergenic Intergenic 291558 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr5-3611 chr5 124033902 124034112 + 8.37 0.000 Intergenic Intergenic 404513 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr17-7064 chr17 64712672 64712882 + 8.37 0.000 Intergenic Intergenic -50470 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr7-7063 chr7 149321921 149322131 + 8.37 0.000 Intergenic Intergenic 36745 NR_036573 155060 Hs.490512 NR_015357 ENSG00000244560 LOC155060 - AI894139 pseudogene pseudo chr1-5705 chr1 61711254 61711464 + 8.37 0.000 intron (NM_032027, intron 2 of 6) intron (NM_032027, intron 2 of 6) 13782 NM_032027 83941 Hs.656790 NM_032027 ENSG00000162604 TM2D1 BBP TM2 domain containing 1 protein-coding chr9-7959 chr9 91571063 91571273 + 8.37 0.000 Intergenic Intergenic -65083 NR_037472 100500821 NR_037472 ENSG00000266855 MIR3910-1 mir-3910-1 microRNA 3910-1 ncRNA chr2-4693 chr2 219522808 219523018 + 8.37 0.000 intron (NM_018674, intron 1 of 9) CpG 8743 NM_182847 55515 Hs.87469 NM_018674 ENSG00000072182 ASIC4 ACCN4|BNAC4 acid sensing ion channel subunit family member 4 protein-coding chr11-3869 chr11 78101272 78101482 + 8.37 0.000 intron (NM_024079, intron 12 of 12) AluSx|SINE|Alu -21515 NM_001203262 100532726 Hs.407860 NM_001203260 ENSG00000259112 NDUFC2-KCTD14 - NDUFC2-KCTD14 readthrough protein-coding chr11-6174 chr11 44760967 44761177 + 8.37 0.000 intron (NM_130783, intron 1 of 9) MIRb|SINE|MIR 34110 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr13-4234 chr13 95857860 95858070 + 8.37 0.000 intron (NM_020121, intron 33 of 38) intron (NM_020121, intron 33 of 38) 180826 NM_006260 5611 Hs.59214 NM_006260 ENSG00000102580 DNAJC3 ACPHD|ERdj6|HP58|P58|P58IPK|PRKRI DnaJ heat shock protein family (Hsp40) member C3 protein-coding chr2-6693 chr2 21792981 21793191 + 8.37 0.000 Intergenic Intergenic -82434 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr20-2062 chr20 10558980 10559190 + 8.37 0.000 intron (NM_001009608, intron 3 of 7) intron (NM_001009608, intron 3 of 7) 90610 NR_106930 102465525 NR_106930 ENSG00000273745 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA chr6-3164 chr6 118436038 118436248 + 8.37 0.000 Intergenic L1PA3|LINE|L1 -65230 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr14-5288 chr14 100724143 100724353 + 8.37 0.000 Intergenic Intergenic -2617 NM_003836 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chr3-3528 chr3 36827166 36827376 + 8.37 0.000 3' UTR (NM_014831, exon 23 of 23) 3' UTR (NM_014831, exon 23 of 23) -4771 NR_147141 105377031 Hs.333862 NR_147141 ENSG00000279727 LINC02033 - long intergenic non-protein coding RNA 2033 ncRNA chr2-10890 chr2 67145863 67146073 + 8.37 0.000 intron (NR_038844, intron 6 of 7) intron (NR_038844, intron 6 of 7) 59522 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA chr4-3197 chr4 16227558 16227768 + 8.37 0.000 intron (NR_027697, intron 1 of 2) intron (NR_027697, intron 1 of 2) 1000 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr2-10563 chr2 240112745 240112955 + 8.37 0.000 Intergenic Intergenic 23455 NM_001163424 150678 Hs.293884 NM_138336 ENSG00000172428 COPS9 CSNAP|MYEOV2 COP9 signalosome subunit 9 protein-coding chr12-2932 chr12 75585794 75586004 + 8.37 0.000 Intergenic MER44C|DNA|TcMar-Tigger -74290 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr11-5296 chr11 44715579 44715789 + 8.37 0.000 Intergenic Intergenic -11278 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr10-8602 chr10 96963923 96964133 + 8.37 0.000 3' UTR (NM_032440, exon 8 of 8) 3' UTR (NM_032440, exon 8 of 8) 131083 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr1-15197 chr1 110035639 110035849 + 8.37 0.000 intron (NR_073071, intron 1 of 21) intron (NR_073071, intron 1 of 21) 1120 NM_033088 85369 Hs.584996 NM_033088 ENSG00000143093 STRIP1 FAM40A|FAR11A striatin interacting protein 1 protein-coding chr16-2552 chr16 54511245 54511455 + 8.37 0.000 Intergenic Intergenic -140651 NR_134923 100996345 Hs.112680 NR_134922 ENSG00000261803 LINC02140 - long intergenic non-protein coding RNA 2140 ncRNA chr21-461 chr21 34782567 34782777 + 8.37 0.000 non-coding (NR_038885, exon 3 of 3) non-coding (NR_038885, exon 3 of 3) 36847 NR_038886 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA chr17-3118 chr17 28282589 28282799 + 8.37 0.000 intron (NR_028334, intron 2 of 2) AluSz6|SINE|Alu 24688 NR_028334 284085 Hs.371796 NM_173624 ENSG00000265480 KRT18P55 - keratin 18 pseudogene 55 pseudo chr19-2858 chr19 9621073 9621283 + 8.37 0.000 promoter-TSS (NM_152289) promoter-TSS (NM_152289) 54 NM_152289 93134 Hs.720081 NM_152289 ENSG00000171469 ZNF561 - zinc finger protein 561 protein-coding chr16-6497 chr16 59212829 59213039 + 8.37 0.000 Intergenic Intergenic -478618 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr8-6249 chr8 40777668 40777878 + 8.37 0.000 intron (NM_024645, intron 2 of 6) intron (NM_024645, intron 2 of 6) 120053 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr17-2218 chr17 81642266 81642476 + 8.37 0.000 promoter-TSS (NR_110866) promoter-TSS (NR_110866) 66 NR_110866 83882 Hs.208219 NM_031945 ENSG00000182612 TSPAN10 OCSP tetraspanin 10 protein-coding chr1-12952 chr1 151905929 151906139 + 8.37 0.000 intron (NM_053055, intron 1 of 5) LTR12C|LTR|ERV1 3477 NM_053055 117145 Hs.164070 NM_053055 ENSG00000159445 THEM4 CTMP thioesterase superfamily member 4 protein-coding chr15-3867 chr15 91135670 91135880 + 8.37 0.000 intron (NM_001323040, intron 2 of 12) MIRb|SINE|MIR 33979 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr1-16053 chr1 201780374 201780584 + 8.37 0.000 exon (NM_001167738, exon 2 of 27) exon (NM_001167738, exon 2 of 27) -28132 NR_031599 100302158 NR_031599 ENSG00000221028 MIR1231 MIRN1231|hsa-mir-1231 microRNA 1231 ncRNA chr3-2080 chr3 4831370 4831580 + 8.37 0.000 intron (NM_001168272, intron 59 of 60) intron (NM_001168272, intron 59 of 60) 75026 NR_125914 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr4-3706 chr4 59608407 59608617 + 8.37 0.000 Intergenic Intergenic 594939 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr12-7932 chr12 108847053 108847263 + 8.37 0.000 intron (NM_018984, intron 2 of 14) AluJo|SINE|Alu -10152 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA chr16-5177 chr16 5442925 5443135 + 8.37 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 173220 NR_110902 101926950 Hs.613285 NR_110902 ENSG00000260338 LINC01570 - long intergenic non-protein coding RNA 1570 ncRNA chr9-6782 chr9 27485748 27485958 + 8.37 0.000 intron (NM_024761, intron 1 of 3) intron (NM_024761, intron 1 of 3) -38461 NM_020124 56832 Hs.591083 NM_020124 ENSG00000147896 IFNK IFNT1|INFE1 interferon kappa protein-coding chr14-2751 chr14 101717645 101717855 + 8.37 0.000 Intergenic Intergenic -12687 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr9-3820 chr9 129509635 129509845 + 8.37 0.000 intron (NR_038955, intron 4 of 4) MLT1A0|LTR|ERVL-MaLR 21080 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr1-15641 chr1 163425062 163425272 + 8.37 0.000 Intergenic Intergenic -1976 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr3-8617 chr3 168908399 168908609 + 8.37 0.000 intron (NR_109989, intron 3 of 4) intron (NR_109989, intron 3 of 4) 6559 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr1-14776 chr1 69388993 69389203 + 8.37 0.000 Intergenic Intergenic -44157 NR_147164 105378788 Hs.164441 NR_147164 ENSG00000229639 LINC01758 - long intergenic non-protein coding RNA 1758 ncRNA chr21-743 chr21 41172470 41172680 + 8.37 0.000 intron (NM_138991, intron 1 of 7) MIRb|SINE|MIR 4415 NM_012105 25825 Hs.43047 NM_012105 ENSG00000182240 BACE2 AEPLC|ALP56|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-secretase 2 protein-coding chr4-2948 chr4 102585379 102585589 + 8.37 0.000 intron (NM_003998, intron 11 of 23) intron (NM_003998, intron 11 of 23) -82998 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chr15-4771 chr15 70340054 70340264 + 8.37 0.000 Intergenic Intergenic 165769 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr4-928 chr4 15654859 15655069 + 8.37 0.000 intron (NR_036464, intron 1 of 11) CpG 393 NM_012161 26234 Hs.643433 NM_012161 ENSG00000118564 FBXL5 FBL4|FBL5|FLR1 F-box and leucine rich repeat protein 5 protein-coding chr15-2986 chr15 52442042 52442252 + 8.37 0.000 intron (NM_001142495, intron 1 of 39) intron (NM_001142495, intron 1 of 39) 86733 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr2-11795 chr2 16324898 16325108 + 8.37 0.000 Intergenic Intergenic 274576 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA chr21-1766 chr21 36202311 36202521 + 8.37 0.000 intron (NM_005128, intron 4 of 36) intron (NM_005128, intron 4 of 36) 37875 NM_005128 9980 Hs.204575 NM_005128 ENSG00000142197 DOP1B 21orf5|C21orf5|DOPEY2 DOP1 leucine zipper like protein B protein-coding chr1-3464 chr1 41528125 41528335 + 8.37 0.000 intron (NM_024503, intron 5 of 8) (CACCCT)n|Simple_repeat|Simple_repeat -43547 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr5-8174 chr5 104545622 104545832 + 8.37 0.000 Intergenic Intergenic -553747 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr1-9945 chr1 78102239 78102449 + 8.37 0.000 intron (NM_001304725, intron 3 of 5) intron (NM_001304725, intron 3 of 5) 56378 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr6-8084 chr6 125101047 125101257 + 8.37 0.000 Intergenic MIR3|SINE|MIR -52621 NM_003287 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr4-3638 chr4 16031714 16031924 + 8.37 0.000 intron (NM_001371408, intron 4 of 24) intron (NM_001371408, intron 4 of 24) 44299 NM_001145851 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr20-3949 chr20 33953698 33953908 + 8.37 0.000 Intergenic MIRb|SINE|MIR -40108 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr20-3938 chr20 33246255 33246465 + 8.37 0.000 Intergenic Intergenic 10364 NM_001243193 51297 Hs.211092 NM_016583 ENSG00000198183 BPIFA1 LUNX|NASG|PLUNC|SPLUNC1|SPURT|bA49G10.5 BPI fold containing family A member 1 protein-coding chr2-5732 chr2 217616904 217617114 + 8.37 0.000 intron (NR_026597, intron 1 of 12) MSTD|LTR|ERVL-MaLR 139584 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr9-4429 chr9 13835180 13835390 + 8.37 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -92686 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr17-7647 chr17 29383773 29383983 + 8.37 0.000 Intergenic Intergenic -6784 NR_039749 100616122 NR_039749 ENSG00000284162 MIR4523 - microRNA 4523 ncRNA chr1-7064 chr1 182993742 182993952 + 8.37 0.000 Intergenic Intergenic -29573 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr8-3067 chr8 18109484 18109694 + 8.37 0.000 Intergenic THE1-int|LTR|ERVL-MaLR -24628 NM_001127505 427 Hs.527412 NM_004315 ENSG00000104763 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase 1 protein-coding chr14-1772 chr14 99731545 99731755 + 8.37 0.000 Intergenic Intergenic 47352 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr4-4248 chr4 18750483 18750693 + 8.37 0.000 Intergenic Intergenic -728713 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr3-5269 chr3 115479255 115479465 + 8.37 0.000 Intergenic MamRep434|DNA|TcMar-Tigger -144150 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr1-7667 chr1 15120567 15120777 + 8.37 0.000 intron (NR_027136, intron 3 of 4) MIRb|SINE|MIR 31792 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr13-1790 chr13 23320864 23321074 + 8.37 0.000 intron (NM_000231, intron 7 of 7) intron (NM_000231, intron 7 of 7) 54539 NM_001278055 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr11-7559 chr11 19190111 19190321 + 8.37 0.000 intron (NM_003476, intron 2 of 5) MIRc|SINE|MIR 11767 NM_001369404 8048 Hs.83577 NM_003476 ENSG00000129170 CSRP3 CLP|CMD1M|CMH12|CRP3|LMO4|MLP cysteine and glycine rich protein 3 protein-coding chr19-6318 chr19 10138616 10138826 + 8.37 0.000 intron (NM_001379, intron 33 of 39) intron (NM_001379, intron 33 of 39) -18822 NM_003755 8666 Hs.529059 NM_003755 ENSG00000130811 EIF3G EIF3-P42|EIF3S4|eIF3-delta|eIF3-p44 eukaryotic translation initiation factor 3 subunit G protein-coding chr15-4515 chr15 52875141 52875351 + 8.37 0.000 Intergenic Intergenic -84910 NM_004498 3175 Hs.555318 NM_004498 ENSG00000169856 ONECUT1 HNF-6|HNF6|HNF6A one cut homeobox 1 protein-coding chr1-12159 chr1 180131806 180132016 + 8.37 0.000 Intergenic L2a|LINE|L2 -22922 NM_001004128 5768 Hs.719176 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr12-3889 chr12 118833466 118833676 + 8.37 0.000 promoter-TSS (NR_134997) promoter-TSS (NR_134997) -35 NR_134997 105370016 Hs.550627 NR_134997 ENSG00000255814 LINC02439 - long intergenic non-protein coding RNA 2439 ncRNA chr12-6899 chr12 23084706 23084916 + 8.37 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -90825 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr11-10359 chr11 111333772 111333982 + 8.37 0.000 Intergenic MIR|SINE|MIR -13880 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chrX-1294 chrX 118520124 118520334 + 8.37 0.000 intron (NM_144658, intron 1 of 52) intron (NM_144658, intron 1 of 52) 24320 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr2-14529 chr2 229344195 229344405 + 8.37 0.000 Intergenic Intergenic -73013 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr17-4285 chr17 75054696 75054906 + 8.37 0.000 intron (NM_015353, intron 3 of 5) AluY|SINE|Alu 7576 NM_015353 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr2-14084 chr2 199339906 199340116 + 8.37 0.000 intron (NM_001172509, intron 7 of 10) intron (NM_001172509, intron 7 of 10) 117928 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr7-4827 chr7 101052445 101052655 + 8.37 0.000 intron (NM_001040105, intron 9 of 12) intron (NM_001040105, intron 9 of 12) 32469 NM_001040105 140453 Hs.271819 NM_001004430 ENSG00000169876 MUC17 MUC-17|MUC-3|MUC3 mucin 17, cell surface associated protein-coding chr8-5866 chr8 13752772 13752982 + 8.37 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 123187 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr4-8537 chr4 163898505 163898715 + 8.37 0.000 intron (NM_001166373, intron 2 of 7) L1PB4|LINE|L1 -285076 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr17-2968 chr17 64670914 64671124 + 8.37 0.000 Intergenic (CTCT)n|Simple_repeat|Simple_repeat -8712 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr16-4245 chr16 20958897 20959107 + 8.37 0.000 intron (NM_001347886, intron 54 of 61) AluSx|SINE|Alu 57740 NM_001369645 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chrX-1136 chrX 30975905 30976115 + 8.37 0.000 Intergenic Intergenic -86756 NM_152787 257397 Hs.188256 NM_152787 ENSG00000157625 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 protein-coding chr5-5056 chr5 92111195 92111405 + 8.37 0.000 Intergenic Intergenic -727983 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chrX-5062 chrX 123981746 123981956 + 8.37 0.000 intron (NM_006603, intron 1 of 32) L2b|LINE|L2 20145 NM_001042751 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr17-7372 chr17 7635249 7635459 + 8.37 0.000 Intergenic Intergenic 5219 NM_001040 6462 Hs.632235 NM_001040 ENSG00000129214 SHBG ABP|SBP|TEBG sex hormone binding globulin protein-coding chr1-14413 chr1 44768807 44769017 + 8.37 0.000 Intergenic FLAM_C|SINE|Alu -6628 NM_001012 6202 Hs.512675 NM_001012 ENSG00000142937 RPS8 S8 ribosomal protein S8 protein-coding chr1-4200 chr1 76868323 76868533 + 8.37 0.000 intron (NM_001320274, intron 1 of 2) CpG 948 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr15-5228 chr15 96765526 96765736 + 8.37 0.000 Intergenic Intergenic 16023 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr10-5515 chr10 83727268 83727478 + 8.37 0.000 Intergenic MSTB|LTR|ERVL-MaLR -50284 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr15-2195 chr15 89496433 89496643 + 8.37 0.000 promoter-TSS (NM_016321) promoter-TSS (NM_016321) 45 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr6-8008 chr6 117178583 117178793 + 8.37 0.000 Intergenic L1PA7|LINE|L1 -86870 NM_153453 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chrX-4281 chrX 41926466 41926676 + 8.37 0.000 Intergenic AluSx1|SINE|Alu -3017 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr5-7175 chr5 5492430 5492640 + 8.37 0.000 Intergenic Intergenic 69858 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr20-1343 chr20 11676464 11676674 + 8.37 0.000 Intergenic MIR3|SINE|MIR 194146 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr10-2766 chr10 123665869 123666079 + 8.37 0.000 promoter-TSS (NM_153442) promoter-TSS (NM_153442) -381 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr3-6489 chr3 111910800 111911010 + 8.37 0.000 intron (NM_001134437, intron 3 of 17) intron (NM_001134437, intron 3 of 17) 51078 NM_001134439 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr15-1675 chr15 44446599 44446809 + 8.37 0.000 intron (NM_016396, intron 1 of 12) A-rich|Low_complexity|Low_complexity 19075 NM_016396 51496 Hs.497967 NM_016396 ENSG00000137770 CTDSPL2 HSPC058|HSPC129 CTD small phosphatase like 2 protein-coding chrX-5226 chrX 136203143 136203353 + 8.37 0.000 intron (NM_001159699, intron 1 of 5) intron (NM_001159699, intron 1 of 5) -1654 NM_001369331 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr9-2537 chr9 127218253 127218463 + 8.37 0.000 TTS (NM_001322325) TTS (NM_001322325) -45304 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr1-15766 chr1 174407762 174407972 + 8.37 0.000 intron (NM_001366446, intron 13 of 25) Tigger2|DNA|TcMar-Tigger -40097 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr7-8288 chr7 39245650 39245860 + 8.37 0.000 intron (NM_001370959, intron 4 of 9) intron (NM_001370959, intron 4 of 9) 83379 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr10-4911 chr10 21793641 21793851 + 8.37 0.000 intron (NM_022365, intron 9 of 11) AluJb|SINE|Alu 209984 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr8-4586 chr8 129709194 129709404 + 8.37 0.000 Intergenic Intergenic -29060 NR_130917 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr12-4470 chr12 15898196 15898406 + 8.37 0.000 intron (NM_007178, intron 7 of 9) intron (NM_007178, intron 7 of 9) -13031 NM_015954 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr20-3838 chr20 24668651 24668861 + 8.37 0.000 Intergenic Intergenic 198795 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr6-4790 chr6 77039348 77039558 + 8.37 0.000 Intergenic Intergenic 424569 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr22-3433 chr22 39640546 39640756 + 8.37 0.000 intron (NM_001003406, intron 5 of 35) L2b|LINE|L2 69898 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr2-6032 chr2 109382806 109383016 + 8.37 0.000 intron (NM_001099289, intron 3 of 9) intron (NM_001099289, intron 3 of 9) -69286 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr16-4715 chr16 82358166 82358376 + 8.37 0.000 Intergenic Intergenic -188047 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr17-2841 chr17 19387057 19387267 + 8.37 0.000 promoter-TSS (NM_002404) promoter-TSS (NM_002404) 28 NM_002404 4239 Hs.296049 NM_002404 ENSG00000166482 MFAP4 - microfibril associated protein 4 protein-coding chr1-5190 chr1 173660758 173660968 + 8.37 0.000 intron (NM_198493, intron 1 of 5) MLT1F2|LTR|ERVL-MaLR 8988 NR_158771 339416 Hs.130054 NM_198493 ENSG00000183831 ANKRD45 CT117 ankyrin repeat domain 45 protein-coding chr19-4246 chr19 54008084 54008294 + 8.37 0.000 intron (NM_145814, intron 3 of 3) AluSx1|SINE|Alu 15901 NM_145814 59285 Hs.631560 NM_031897 ENSG00000130433 CACNG6 - calcium voltage-gated channel auxiliary subunit gamma 6 protein-coding chr11-1550 chr11 44095569 44095779 + 8.37 0.000 promoter-TSS (NM_001178083) promoter-TSS (NM_001178083) -4 NM_001178083 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr16-2648 chr16 29669997 29670207 + 8.37 0.000 3' UTR (NM_003123, exon 2 of 2) 3' UTR (NM_003123, exon 2 of 2) 6855 NM_003123 6693 Hs.632188 NM_003123 ENSG00000197471 SPN CD43|GALGP|GPL115|LSN sialophorin protein-coding chr3-7394 chr3 87294037 87294247 + 8.37 0.000 Intergenic Intergenic -17558 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr11-6666 chr11 76217732 76217942 + 8.37 0.000 Intergenic L2|LINE|L2 -11335 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr2-4376 chr2 28753592 28753802 + 8.37 0.000 intron (NM_206876, intron 2 of 8) intron (NM_206876, intron 2 of 8) 1867 NM_002709 5500 Hs.702907 NM_002709 ENSG00000213639 PPP1CB HEL-S-80p|NSLH2|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1 catalytic subunit beta protein-coding chr4-6720 chr4 3985704 3985914 + 8.37 0.000 Intergenic HERVK-int|LTR|ERVK -30381 NR_130740 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr1-12764 chr1 72927665 72927875 + 8.37 0.000 Intergenic L2a|LINE|L2 -378400 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chr2-12832 chr2 95530636 95530846 + 8.37 0.000 Intergenic Intergenic -46010 NM_001164464 653192 Hs.723811 NM_001164464 ENSG00000144010 TRIM43B - tripartite motif containing 43B protein-coding chr8-3576 chr8 132406728 132406938 + 8.37 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 40429 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr22-3426 chr22 38403083 38403293 + 8.37 0.000 Intergenic Intergenic -4262 NR_002821 400927 Hs.720223 NR_002821 TPTEP2 Z98749.2 TPTE pseudogene 2 pseudo chr22-3752 chr22 27095899 27096109 + 8.37 0.000 Intergenic Intergenic -35486 NM_001318329 284898 Hs.350813 NM_001318329 LOC284898 - uncharacterized LOC284898 protein-coding chr12-3467 chr12 120325504 120325714 + 8.37 0.000 intron (NM_000928, intron 2 of 3) intron (NM_000928, intron 2 of 3) 2170 NM_000928 5319 Hs.992 NM_000928 ENSG00000170890 PLA2G1B PLA2|PLA2A|PPLA2 phospholipase A2 group IB protein-coding chr10-3133 chr10 52782028 52782238 + 8.37 0.000 Intergenic MER68|LTR|ERVL -10433 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr4-8072 chr4 122577105 122577315 + 8.37 0.000 Intergenic Intergenic -41773 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr7-4007 chr7 142026016 142026226 + 8.37 0.000 intron (NM_004668, intron 8 of 47) intron (NM_004668, intron 8 of 47) 30242 NM_004668 8972 Hs.122785 NM_004668 ENSG00000257335 MGAM MG|MGA maltase-glucoamylase protein-coding chr1-10223 chr1 115185179 115185389 + 8.37 0.000 Intergenic Intergenic -95781 NM_005725 10100 Hs.310458 NM_005725 ENSG00000134198 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding chr12-7411 chr12 57847124 57847334 + 8.37 0.000 promoter-TSS (NM_005730) promoter-TSS (NM_005730) -500 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr13-1290 chr13 32330534 32330744 + 8.37 0.000 intron (NM_000059, intron 8 of 26) Tigger7|DNA|TcMar-Tigger 15159 NM_000059 675 Hs.34012 NM_000059 ENSG00000139618 BRCA2 BRCC2|BROVCA2|FACD|FAD|FAD1|FANCD|FANCD1|GLM3|PNCA2|XRCC11 BRCA2 DNA repair associated protein-coding chr5-6073 chr5 8533447 8533657 + 8.37 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 72627 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr3-3341 chr3 11755837 11756047 + 8.37 0.000 Intergenic Intergenic -35403 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr12-6986 chr12 30027016 30027226 + 8.37 0.000 Intergenic Intergenic -242362 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr13-2108 chr13 86762190 86762400 + 8.37 0.000 Intergenic HERVFH21-int|LTR|ERV1 -149625 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr5-5954 chr5 100506348 100506558 + 8.37 0.000 Intergenic L1MEf|LINE|L1 -28921 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr15-3986 chr15 49731608 49731818 + 8.37 0.000 Intergenic L1PA14|LINE|L1 110665 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr6-4995 chr6 108259390 108259600 + 8.37 0.000 intron (NM_001300929, intron 1 of 3) AluSp|SINE|Alu 1545 NM_003795 8724 Hs.12102 NM_003795 ENSG00000112335 SNX3 Grd19|MCOPS8|SDP3 sorting nexin 3 protein-coding chr10-6911 chr10 47149226 47149436 + 8.37 0.000 Intergenic L1MC3|LINE|L1 -150866 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr11-5144 chr11 2120826 2121036 + 8.37 0.000 Intergenic Intergenic 13278 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr12-4018 chr12 39491041 39491251 + 8.37 0.000 Intergenic Intergenic -48026 NM_001173465 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr18-3293 chr18 53772597 53772807 + 8.37 0.000 Intergenic Charlie1a|DNA|hAT-Charlie -191643 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr15-4546 chr15 56576481 56576691 + 8.37 0.000 Intergenic L1PB1|LINE|L1 -111449 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr1-5477 chr1 111508424 111508634 + 8.37 0.000 intron (NM_001081976, intron 1 of 5) intron (NM_001081976, intron 1 of 5) -4408 NM_000677 140 Hs.281342 NM_000677 ENSG00000282608 ADORA3 A3AR adenosine A3 receptor protein-coding chr18-1674 chr18 69840149 69840359 + 8.37 0.000 intron (NM_152721, intron 7 of 7) intron (NM_152721, intron 7 of 7) 107619 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr9-3011 chr9 109816440 109816650 + 8.37 0.000 intron (NM_053016, intron 1 of 6) L2|LINE|L2 36347 NM_053016 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr9-7669 chr9 69401834 69402044 + 8.37 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 72614 NM_004816 9413 Hs.118003 NM_004816 ENSG00000135063 FAM189A2 C9orf61|X123 family with sequence similarity 189 member A2 protein-coding chr11-4625 chr11 12389116 12389326 + 8.37 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 11650 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr16-2183 chr16 69900950 69901160 + 8.37 0.000 intron (NM_001270453, intron 5 of 20) intron (NM_001270453, intron 5 of 20) -23984 NM_199424 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr22-3853 chr22 32810552 32810762 + 8.37 0.000 intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 9841 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr3-8311 chr3 62782055 62782265 + 8.37 0.000 intron (NM_003716, intron 1 of 29) intron (NM_003716, intron 1 of 29) 93256 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr9-4176 chr9 21279568 21279778 + 8.37 0.000 Intergenic MER106B|DNA|hAT-Charlie -1110 NR_036676 3453 Hs.545842 NR_036676 IFNA22P IFNAP22 interferon alpha 22, pseudogene pseudo GL000218.1-5 GL000218.1 18427 18637 + 8.37 0.000 NA NA NA NA chr12-3184 chr12 51934732 51934942 + 8.37 0.000 Intergenic L2b|LINE|L2 -16862 NM_004302 91 Hs.438918 NM_004302 ENSG00000135503 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor type 1B protein-coding chr11-7979 chr11 9856046 9856256 + 8.37 0.000 intron (NM_030962, intron 19 of 39) intron (NM_030962, intron 19 of 39) 17009 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr4-6834 chr4 8329983 8330193 + 8.37 0.000 Intergenic Intergenic 9912 NR_149125 105374374 Hs.145224 NR_149125 ENSG00000249145 LINC02517 - long intergenic non-protein coding RNA 2517 ncRNA chr7-9538 chr7 140196870 140197080 + 8.37 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 19714 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr6-3082 chr6 79626677 79626887 + 8.37 0.000 Intergenic Intergenic -4547 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chr11-9338 chr11 46437426 46437636 + 8.37 0.000 intron (NM_001267782, intron 14 of 19) intron (NM_001267782, intron 14 of 19) -14276 NR_036118 100422825 NR_036118 ENSG00000283497 MIR3160-2 mir-3160-2 microRNA 3160-2 ncRNA chr17-4810 chr17 51112680 51112890 + 8.37 0.000 intron (NM_001130527, intron 1 of 29) AluJb|SINE|Alu 8083 NM_001130528 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr22-2533 chr22 25292894 25293104 + 8.37 0.000 Intergenic Intergenic -25258 NR_029395 91353 Hs.651077 NM_001013618 IGLL3P 16.1|IGLL3 immunoglobulin lambda like polypeptide 3, pseudogene pseudo chr9-6090 chr9 137527362 137527572 + 8.37 0.000 intron (NM_001098537, intron 8 of 34) L1MD3|LINE|L1 22935 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr1-9587 chr1 44214171 44214381 + 8.37 0.000 intron (NM_019100, intron 1 of 9) intron (NM_019100, intron 1 of 9) 805 NM_001034024 55929 Hs.8008 NM_019100 ENSG00000178028 DMAP1 DNMAP1|DNMTAP1|EAF2|MEAF2|SWC4 DNA methyltransferase 1 associated protein 1 protein-coding chr5-4504 chr5 11179938 11180148 + 8.37 0.000 intron (NM_001288715, intron 10 of 20) THE1D|LTR|ERVL-MaLR 408874 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr15-1663 chr15 36501161 36501371 + 8.37 0.000 Intergenic Intergenic -78360 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr13-3526 chr13 22975317 22975527 + 8.37 0.000 Intergenic MER83|LTR|ERV1 -59053 NR_138043 100996930 Hs.380803 NR_138043 LINC00621 - long intergenic non-protein coding RNA 621 ncRNA chr1-9436 chr1 34057652 34057862 + 8.37 0.000 intron (NM_052896, intron 2 of 69) intron (NM_052896, intron 2 of 69) 107517 NM_001281956 114784 Hs.656915 NM_052896 ENSG00000121904 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding chr2-5141 chr2 26139884 26140094 + 8.37 0.000 Intergenic HAL1M8|LINE|L1 -33099 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr18-969 chr18 61951857 61952067 + 8.37 0.000 Intergenic Intergenic -58955 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr4-7591 chr4 80921311 80921521 + 8.37 0.000 intron (NM_152770, intron 4 of 5) L2c|LINE|L2 -109292 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr1-12706 chr1 53670334 53670544 + 8.37 0.000 intron (NM_001367484, intron 2 of 10) L2c|LINE|L2 63765 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr11-8802 chr11 11282855 11283065 + 8.37 0.000 intron (NM_001363464, intron 9 of 9) L2a|LINE|L2 70290 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr10-7307 chr10 132711831 132712041 + 8.37 0.000 intron (NM_005539, intron 8 of 15) intron (NM_005539, intron 8 of 15) 30661 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr2-8796 chr2 167762258 167762468 + 8.37 0.000 Intergenic Intergenic -56309 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr5-2876 chr5 90879014 90879224 + 8.37 0.000 intron (NR_003149, intron 83 of 89) intron (NR_003149, intron 83 of 89) 320322 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr14-3967 chr14 24893313 24893523 + 8.37 0.000 intron (NM_001351943, intron 3 of 6) MIR|SINE|MIR 155582 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr6-7755 chr6 93325662 93325872 + 8.37 0.000 intron (NM_004440, intron 5 of 16) intron (NM_004440, intron 5 of 16) 93792 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr1-11487 chr1 112358880 112359090 + 8.37 0.000 Intergenic Intergenic -37229 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr5-2738 chr5 135245553 135245763 + 8.37 0.000 intron (NR_037895, intron 2 of 3) intron (NR_037895, intron 2 of 3) 2519 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr11-6884 chr11 103395681 103395891 + 8.37 0.000 intron (NM_001377, intron 83 of 88) MLT1K|LTR|ERVL-MaLR 286360 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr6-5906 chr6 47080329 47080539 + 8.37 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -38102 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr8-7173 chr8 123653856 123654066 + 8.37 0.000 promoter-TSS (NM_001081675) promoter-TSS (NM_001081675) -160 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr16-3109 chr16 68672768 68672978 + 8.37 0.000 intron (NM_001793, intron 2 of 15) L1ME3A|LINE|L1 27563 NM_001317195 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr8-2353 chr8 25060942 25061152 + 8.37 0.000 Intergenic Intergenic -104178 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr8-3739 chr8 22260494 22260704 + 8.37 0.000 intron (NR_134293, intron 1 of 1) L2a|LINE|L2 14563 NR_134293 100507071 Hs.458623 NR_134293 ENSG00000254064 LOC100507071 - uncharacterized LOC100507071 ncRNA chr19-6923 chr19 46256975 46257185 + 8.37 0.000 Intergenic L1MB5|LINE|L1 27338 NM_198541 374918 Hs.546554 NM_198541 ENSG00000188293 IGFL1 APRG644|UNQ644 IGF like family member 1 protein-coding chr14-3892 chr14 95615179 95615389 + 8.37 0.000 Intergenic Intergenic -36813 NR_152604 27004 Hs.510368 NM_012468 TCL6 TNG1|TNG2 T cell leukemia/lymphoma 6 ncRNA chr5-2700 chr5 79181704 79181914 + 8.37 0.000 Intergenic Intergenic -54322 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr12-2653 chr12 7839851 7840061 + 8.37 0.000 intron (NM_001286237, intron 1 of 9) AluJo|SINE|Alu 32959 NM_001286233 144195 Hs.655169 NM_153449 ENSG00000173262 SLC2A14 GLUT14|SLC2A3P3 solute carrier family 2 member 14 protein-coding chr2-3026 chr2 64263298 64263508 + 8.37 0.000 Intergenic MIRc|SINE|MIR 35002 NR_120420 100507006 Hs.442789 NR_120420 LOC100507006 - uncharacterized LOC100507006 ncRNA chr19-4570 chr19 11014624 11014834 + 8.37 0.000 intron (NM_001128845, intron 15 of 32) intron (NM_001128845, intron 15 of 32) 30577 NM_001128848 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr16-1718 chr16 29909494 29909704 + 8.37 0.000 intron (NM_178863, intron 5 of 5) intron (NM_178863, intron 5 of 5) 9111 NM_181718 253982 Hs.655761 NM_181718 ENSG00000174939 ASPHD1 - aspartate beta-hydroxylase domain containing 1 protein-coding chr7-7538 chr7 110521386 110521596 + 8.37 0.000 Intergenic Intergenic -561278 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr1-6960 chr1 159040315 159040525 + 8.37 0.000 intron (NM_005531, intron 7 of 10) intron (NM_005531, intron 7 of 10) 30513 NM_001206567 3428 Hs.380250 NM_005531 ENSG00000163565 IFI16 IFNGIP1|PYHIN2 interferon gamma inducible protein 16 protein-coding chr8-5472 chr8 46661706 46661916 + 8.37 0.000 Intergenic AluSx1|SINE|Alu -44168 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr9-4604 chr9 104604580 104604790 + 8.37 0.000 TTS (NM_001004481) TTS (NM_001004481) 942 NM_001004481 392376 Hs.553789 NM_001004481 ENSG00000276119 OR13C2 OR37K olfactory receptor family 13 subfamily C member 2 protein-coding chr4-7426 chr4 66637259 66637469 + 8.37 0.000 Intergenic Intergenic 360540 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr3-9057 chr3 24546024 24546234 + 8.37 0.000 Intergenic Intergenic -50421 NM_001354708 7068 Hs.187861 NM_000461 ENSG00000151090 THRB C-ERBA-2|C-ERBA-BETA|ERBA2|GRTH|NR1A2|PRTH|THR1|THRB1|THRB2 thyroid hormone receptor beta protein-coding chr10-7785 chr10 35926805 35927015 + 8.37 0.000 Intergenic Intergenic 148608 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr6-6432 chr6 97870573 97870783 + 8.37 0.000 Intergenic Intergenic -153853 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr1-11334 chr1 26477672 26477882 + 8.37 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 5337 NM_005517 3151 Hs.181163 NM_005517 ENSG00000198830 HMGN2 HMG17 high mobility group nucleosomal binding domain 2 protein-coding chr12-8077 chr12 117090579 117090789 + 8.37 0.000 intron (NR_031766, intron 1 of 7) intron (NR_031766, intron 1 of 7) 8732 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr15-4533 chr15 55564269 55564479 + 8.37 0.000 intron (NM_015617, intron 1 of 2) L1MB7|LINE|L1 23971 NM_001367806 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr4-2928 chr4 93869440 93869650 + 8.37 0.000 Intergenic Intergenic 40792 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr20-1384 chr20 63361578 63361788 + 8.37 0.000 promoter-TSS (NM_000744) promoter-TSS (NM_000744) -287 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chrX-3051 chrX 101948170 101948380 + 8.37 0.000 Intergenic Intergenic -16248 NM_001011657 84460 Hs.496512 NM_001011657 ENSG00000166432 ZMAT1 - zinc finger matrin-type 1 protein-coding chr2-5048 chr2 241592928 241593138 + 8.37 0.000 intron (NM_001164356, intron 4 of 4) AluSz|SINE|Alu 24468 NM_001164356 51078 Hs.435759 NM_015963 ENSG00000176946 THAP4 CGI-36|Nb(III)|PP238 THAP domain containing 4 protein-coding chr2-10281 chr2 128623942 128624152 + 8.37 0.000 Intergenic Intergenic -240553 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr6-6176 chr6 7217026 7217236 + 8.37 0.000 intron (NM_001003699, intron 8 of 12) intron (NM_001003699, intron 8 of 12) 96068 NM_003144 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr5-1786 chr5 42301406 42301616 + 8.37 0.000 Intergenic Intergenic -121928 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr7-6877 chr7 55506147 55506357 + 8.37 0.000 intron (NM_001321242, intron 2 of 4) intron (NM_001321242, intron 2 of 4) 20628 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr3-8975 chr3 16259232 16259442 + 8.37 0.000 3' UTR (NM_001047434, exon 2 of 2) 3' UTR (NM_001047434, exon 2 of 2) 5606 NM_206831 285381 Hs.388087 NM_206831 ENSG00000154813 DPH3 DELGIP|DELGIP1|DESR1|DPH3A|KTI11|ZCSL2 diphthamide biosynthesis 3 protein-coding chr2-8103 chr2 77327877 77328087 + 8.37 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) 194394 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr8-2335 chr8 17285013 17285223 + 8.37 0.000 intron (NM_001363167, intron 10 of 11) intron (NM_001363167, intron 10 of 11) 38160 NM_001363171 137492 Hs.343873 NM_152415 ENSG00000155975 VPS37A HCRP1|PQBP2|SPG53 VPS37A subunit of ESCRT-I protein-coding chr8-3915 chr8 41661266 41661476 + 8.37 0.000 promoter-TSS (NR_030161) promoter-TSS (NR_030161) -863 NR_030161 619554 NR_030161 ENSG00000274705 MIR486-1 MIR486|MIRN486|hsa-mir-486|hsa-mir-486-1|mir-486-1 microRNA 486-1 ncRNA chr10-4700 chr10 133165344 133165554 + 8.37 0.000 intron (NM_001347866, intron 1 of 3) CpG 5230 NM_152643 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr7-2308 chr7 99043238 99043448 + 8.37 0.000 intron (NM_020429, intron 12 of 18) intron (NM_020429, intron 12 of 18) 30178 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr18-1947 chr18 36186660 36186870 + 8.37 0.000 promoter-TSS (NM_017947) promoter-TSS (NM_017947) 670 NR_134605 101927809 Hs.600673 NR_134605 ENSG00000260552 LOC101927809 - uncharacterized LOC101927809 ncRNA chr7-4600 chr7 18902029 18902239 + 8.37 0.000 intron (NM_058176, intron 21 of 22) intron (NM_058176, intron 21 of 22) 215502 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr6-3952 chr6 90859621 90859831 + 8.37 0.000 Intergenic Intergenic -272654 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr6-5096 chr6 119027220 119027430 + 8.37 0.000 intron (NM_001288576, intron 1 of 15) MER4D0|LTR|ERV1 41818 NR_030315 693128 NR_030315 ENSG00000207982 MIR548B MIRN548B microRNA 548b ncRNA chr4-6337 chr4 94581500 94581710 + 8.37 0.000 intron (NM_001011516, intron 5 of 9) intron (NM_001011516, intron 5 of 9) 129663 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr7-5630 chr7 54462759 54462969 + 8.37 0.000 Intergenic Intergenic -79461 NM_001301009 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding chr2-8130 chr2 80614191 80614401 + 8.37 0.000 intron (NM_001282599, intron 11 of 11) MER2|DNA|TcMar-Tigger 300917 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr4-6321 chr4 88969818 88970028 + 8.37 0.000 intron (NM_014883, intron 4 of 23) intron (NM_014883, intron 4 of 23) 87262 NM_014883 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr15-2471 chr15 87208165 87208375 + 8.37 0.000 Intergenic Intergenic -219844 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA chrX-3481 chrX 36882025 36882235 + 8.37 0.000 Intergenic Intergenic -126229 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr1-10542 chr1 171221956 171222166 + 8.37 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -26410 NM_001282694 2326 Hs.1424 NM_002021 ENSG00000010932 FMO1 - flavin containing dimethylaniline monoxygenase 1 protein-coding chr4-5922 chr4 146790148 146790358 + 8.37 0.000 intron (NR_133922, intron 12 of 13) AluY|SINE|Alu 151360 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr1-9282 chr1 25641986 25642196 + 8.37 0.000 intron (NM_020379, intron 1 of 11) intron (NM_020379, intron 1 of 11) 24623 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr5-6646 chr5 51444932 51445142 + 8.37 0.000 Intergenic Intergenic 61589 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding chr21-1055 chr21 28729046 28729256 + 8.37 0.000 Intergenic Intergenic 156216 NM_013240 29104 Hs.163846 NM_013240 ENSG00000156239 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P N-6 adenine-specific DNA methyltransferase 1 protein-coding chr4-5791 chr4 80305635 80305845 + 8.37 0.000 Intergenic Intergenic -29980 NM_001206997 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr10-801 chr10 16841840 16842050 + 8.37 0.000 intron (NM_001081, intron 60 of 66) L2a|LINE|L2 -24491 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr18-1064 chr18 26004006 26004216 + 8.37 0.000 Intergenic Intergenic 86502 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr8-5413 chr8 29773185 29773395 + 8.37 0.000 intron (NR_125815, intron 1 of 3) intron (NR_125815, intron 1 of 3) 24981 NR_125814 101929450 Hs.512440 NR_125814 ENSG00000253490 LINC02099 - long intergenic non-protein coding RNA 2099 ncRNA chr7-9294 chr7 127085400 127085610 + 8.37 0.000 intron (NM_001371085, intron 3 of 10) L1PA6|LINE|L1 -27321 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr14-3086 chr14 64118232 64118442 + 8.37 0.000 intron (NM_015180, intron 66 of 114) intron (NM_015180, intron 66 of 114) -23212 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA chr16-3397 chr16 71762312 71762522 + 8.37 0.000 intron (NM_001128, intron 9 of 22) MER21B|LTR|ERVL -3930 NR_003059 692111 NR_003059 ENSG00000223224 SNORD71 HBII-239|MIRN768|hsa-mir-768 small nucleolar RNA, C/D box 71 snoRNA chr1-15696 chr1 168676175 168676385 + 8.37 0.000 Intergenic MIRc|SINE|MIR 52926 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr7-7054 chr7 146282841 146283051 + 8.37 0.000 Intergenic Intergenic -491325 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr4-3424 chr4 76682388 76682598 + 8.37 0.000 intron (NM_020859, intron 2 of 10) L2c|LINE|L2 106942 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr5-5535 chr5 145472315 145472525 + 8.37 0.000 Intergenic MIRc|SINE|MIR 362922 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr9-6669 chr9 135080416 135080626 + 8.37 0.000 intron (NM_014279, intron 1 of 5) intron (NM_014279, intron 1 of 5) 5016 NM_014279 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr2-10180 chr2 95318077 95318287 + 8.37 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) 20835 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr8-4144 chr8 75086279 75086489 + 8.37 0.000 Intergenic Intergenic 86229 NM_001286778 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr6-2727 chr6 71888907 71889117 + 8.37 0.000 intron (NM_001350412, intron 1 of 2) intron (NM_001350412, intron 1 of 2) 2309 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr22-3080 chr22 43240397 43240607 + 8.37 0.000 intron (NM_173050, intron 6 of 21) intron (NM_173050, intron 6 of 21) 27828 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr4-6237 chr4 63622892 63623102 + 8.37 0.000 Intergenic Intergenic 786453 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr11-8296 chr11 73206673 73206883 + 8.37 0.000 Intergenic L1MEd|LINE|L1 -11503 NM_002564 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chrX-1875 chrX 123869149 123869359 + 8.37 0.000 intron (NR_037916, intron 1 of 5) AluSz|SINE|Alu 9087 NM_001167 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr11-5060 chr11 107829240 107829450 + 8.37 0.000 intron (NM_017515, intron 1 of 7) AluSx1|SINE|Alu 29442 NM_017515 54733 Hs.524014 NM_017515 ENSG00000110660 SLC35F2 HSNOV1 solute carrier family 35 member F2 protein-coding chr20-824 chr20 2469981 2470191 + 8.37 0.000 intron (NM_003091, intron 1 of 6) intron (NM_003091, intron 1 of 6) 703 NM_003091 6628 Hs.83753 NM_003091 ENSG00000125835 SNRPB CCMS|COD|SNRPB1|Sm-B/B'|SmB/B'|SmB/SmB'|snRNP-B small nuclear ribonucleoprotein polypeptides B and B1 protein-coding chr2-2015 chr2 80080873 80081083 + 8.37 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -214395 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr17-4000 chr17 72370869 72371079 + 8.37 0.000 Intergenic Intergenic 28163 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr22-4277 chr22 49380633 49380843 + 8.37 0.000 Intergenic Intergenic 162728 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr18-2564 chr18 7116260 7116470 + 8.37 0.000 intron (NM_005559, intron 1 of 62) intron (NM_005559, intron 1 of 62) 1432 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr4-4662 chr4 83517435 83517645 + 8.37 0.000 Intergenic ERVL-B4-int|LTR|ERVL -18374 NM_001256422 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr10-3115 chr10 33008950 33009160 + 8.37 0.000 Intergenic Intergenic -50825 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr8-7319 chr8 133538855 133539065 + 8.37 0.000 intron (NM_003033, intron 2 of 8) MIR|SINE|MIR 32927 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr3-3507 chr3 14623347 14623557 + 8.37 0.000 Intergenic MIRb|SINE|MIR -28294 NR_135523 51244 Hs.517820 NM_016474 ENSG00000154781 CCDC174 C3orf19|HSPC212|IHPM|IHPMR coiled-coil domain containing 174 protein-coding chr17-3751 chr17 29614346 29614556 + 8.37 0.000 TTS (NM_032854) TTS (NM_032854) 3666 NM_001351301 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chrX-4956 chrX 112868537 112868747 + 8.37 0.000 Intergenic MIR|SINE|MIR -27811 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chr18-2647 chr18 45007799 45008009 + 8.37 0.000 intron (NM_015559, intron 4 of 5) intron (NM_015559, intron 4 of 5) -37738 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr16-3373 chr16 57039215 57039425 + 8.37 0.000 intron (NM_001330552, intron 15 of 47) intron (NM_001330552, intron 15 of 47) 22246 NM_032206 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chrX-1276 chrX 109840689 109840899 + 8.37 0.000 Intergenic Intergenic -29607 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr2-14427 chr2 222037421 222037631 + 8.37 0.000 Intergenic L2a|LINE|L2 -260621 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chrX-1198 chrX 69503727 69503937 + 8.37 0.000 Intergenic Intergenic -1403 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr20-763 chr20 36259874 36260084 + 8.37 0.000 Intergenic Intergenic 23501 NM_001271874 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr14-4266 chr14 104762069 104762279 + 8.37 0.000 Intergenic AluSz|SINE|Alu 9027 NM_006427 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr3-7754 chr3 62872581 62872791 + 8.37 0.000 intron (NM_003716, intron 1 of 29) intron (NM_003716, intron 1 of 29) 2730 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr22-1162 chr22 21468108 21468318 + 8.37 0.000 intron (NM_001207052, intron 3 of 8) CpG-18822 1043 NM_001207052 645426 Hs.376511 NM_001207052 ENSG00000206140 TMEM191C - transmembrane protein 191C protein-coding KI270519.1-4 KI270519.1 90831 91041 + 8.37 0.000 NA NA NA NA chr10-7153 chr10 101826977 101827187 + 8.37 0.000 TTS (NM_173197) TTS (NM_173197) 8014 NR_045118 100289509 Hs.568881 NR_045118 ENSG00000226009 KCNIP2-AS1 - KCNIP2 antisense RNA 1 ncRNA chr2-11743 chr2 11072881 11073091 + 8.37 0.000 Intergenic LTR8|LTR|ERV1 59190 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr14-5238 chr14 99064432 99064642 + 8.37 0.000 Intergenic Intergenic 207660 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr20-1789 chr20 58295026 58295236 + 8.37 0.000 intron (NR_003505, intron 2 of 16) L2a|LINE|L2 14308 NR_003505 55370 Hs.473179 NM_018498 PPP4R1L C20orf192|PPP4R1P1|PRO1085 protein phosphatase 4 regulatory subunit 1 like (pseudogene) pseudo chr21-1945 chr21 45760309 45760519 + 8.37 0.000 intron (NM_001348243, intron 3 of 15) L1MEd|LINE|L1 12400 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr16-6315 chr16 48441236 48441446 + 8.37 0.000 Intergenic Intergenic -55928 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr21-1723 chr21 32903452 32903662 + 8.37 0.000 Intergenic LTR33|LTR|ERVL -55331 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA chr11-9692 chr11 67577685 67577895 + 8.37 0.000 Intergenic Intergenic -5805 NM_000852 2950 Hs.523836 NM_000852 ENSG00000084207 GSTP1 DFN7|FAEES3|GST3|GSTP|HEL-S-22|PI glutathione S-transferase pi 1 protein-coding chr3-4198 chr3 131067998 131068208 + 8.37 0.000 intron (NM_001353038, intron 4 of 18) intron (NM_001353038, intron 4 of 18) 40375 NM_001321223 79858 Hs.657336 NM_024800 ENSG00000114670 NEK11 - NIMA related kinase 11 protein-coding chr11-2270 chr11 133326798 133327008 + 8.37 0.000 intron (NM_001012393, intron 1 of 7) (GT)n|Simple_repeat|Simple_repeat 205598 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr16-4899 chr16 89031198 89031408 + 8.37 0.000 Intergenic AluSx|SINE|Alu -54096 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr11-9112 chr11 32799527 32799737 + 8.37 0.000 Intergenic Intergenic -4974 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr1-6325 chr1 3225333 3225543 + 8.37 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 97463 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr10-7049 chr10 83630378 83630588 + 8.37 0.000 Intergenic Intergenic 46606 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr7-6538 chr7 45628666 45628876 + 8.37 0.000 intron (NM_001281768, intron 5 of 9) intron (NM_001281768, intron 5 of 9) 54403 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr3-8576 chr3 156012461 156012671 + 8.37 0.000 Intergenic Intergenic -107982 NM_001308217 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr3-3779 chr3 12846434 12846644 + 8.37 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -4957 NM_001007073 6161 Hs.265174 NM_000994 ENSG00000144713 RPL32 L32|PP9932 ribosomal protein L32 protein-coding chr5-1999 chr5 179130222 179130432 + 8.37 0.000 intron (NM_014244, intron 15 of 21) intron (NM_014244, intron 15 of 21) 69954 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr12-6997 chr12 30868690 30868900 + 8.37 0.000 Intergenic L1ME3G|LINE|L1 -57953 NM_001370302 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr3-8389 chr3 97293077 97293287 + 8.37 0.000 intron (NM_001080448, intron 5 of 17) MER52A|LTR|ERV1 -146425 NM_173655 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr17-5388 chr17 32161943 32162153 + 8.37 0.000 intron (NM_001288755, intron 1 of 18) MER21C|LTR|ERVL -10477 NR_002222 503640 Hs.631752 NR_002222 ARGFXP2 - arginine-fifty homeobox pseudogene 2 pseudo chr10-2288 chr10 15439296 15439506 + 8.37 0.000 Intergenic Intergenic -68112 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr22-2764 chr22 40876952 40877162 + 8.37 0.000 intron (NM_022098, intron 2 of 9) L1ME2|LINE|L1 -14944 NM_145174 150353 Hs.585042 NM_145174 ENSG00000172404 DNAJB7 DJ5|HSC3 DnaJ heat shock protein family (Hsp40) member B7 protein-coding chr12-6611 chr12 129536218 129536428 + 8.37 0.000 intron (NM_133448, intron 2 of 8) intron (NM_133448, intron 2 of 8) 327722 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chr8-6104 chr8 27577980 27578190 + 8.37 0.000 Intergenic L1ME3E|LINE|L1 32666 NR_106902 102465508 NR_106902 ENSG00000284280 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA chr18-2274 chr18 75503968 75504178 + 8.37 0.000 Intergenic Intergenic -76370 NM_001037331 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr2-11846 chr2 20244003 20244213 + 8.37 0.000 Intergenic AluJb|SINE|Alu -18675 NM_001006946 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr6-1491 chr6 89117508 89117718 + 8.37 0.000 intron (NM_080743, intron 1 of 4) CpG 458 NM_080743 135295 Hs.254414 NM_080743 ENSG00000154548 SRSF12 SFRS13B|SFRS19|SRrp35 serine and arginine rich splicing factor 12 protein-coding chr9-6274 chr9 131488078 131488288 + 8.37 0.000 intron (NM_013318, intron 27 of 30) intron (NM_013318, intron 27 of 30) -2303 NR_002914 26786 NR_002914 ENSG00000235284 SNORD62A RNU62|U62|U62A small nucleolar RNA, C/D box 62A snoRNA chr20-2454 chr20 31246579 31246789 + 8.37 0.000 Intergenic L1M2a|LINE|L1 -10980 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr8-4915 chr8 97454971 97455181 + 8.37 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -8579 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr6-2796 chr6 148464739 148464949 + 8.37 0.000 intron (NM_001346506, intron 5 of 20) intron (NM_001346506, intron 5 of 20) -43655 NM_001346507 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr4-8239 chr4 139029807 139030017 + 8.37 0.000 intron (NM_012118, intron 1 of 2) AluSx|SINE|Alu 14131 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr20-3459 chr20 52125510 52125720 + 8.37 0.000 intron (NM_199427, intron 5 of 8) intron (NM_199427, intron 5 of 8) -20131 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr12-5989 chr12 96240238 96240448 + 8.37 0.000 intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) -15155 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr10-5192 chr10 60041593 60041803 + 8.37 0.000 intron (NM_001204403, intron 43 of 43) intron (NM_001204403, intron 43 of 43) -80785 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr3-4722 chr3 62555986 62556196 + 8.37 0.000 intron (NM_003716, intron 10 of 29) intron (NM_003716, intron 10 of 29) -182541 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr9-8115 chr9 99602349 99602559 + 8.37 0.000 intron (NR_109802, intron 3 of 6) intron (NR_109802, intron 3 of 6) 217435 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr16-5497 chr16 11274110 11274320 + 8.37 0.000 promoter-TSS (NM_021247) promoter-TSS (NM_021247) -586 NM_021247 58531 Hs.259636 NM_021247 ENSG00000178257 PRM3 - protamine 3 protein-coding chr15-1328 chr15 85749773 85749983 + 8.37 0.000 TTS (NM_001270546) TTS (NM_001270546) 8847 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr4-4056 chr4 3312419 3312629 + 8.37 0.000 Intergenic Intergenic -1623 NM_198229 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr8-5523 chr8 65483926 65484136 + 8.37 0.000 Intergenic Intergenic 78635 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr1-14777 chr1 69453914 69454124 + 8.37 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 20764 NR_147164 105378788 Hs.164441 NR_147164 ENSG00000229639 LINC01758 - long intergenic non-protein coding RNA 1758 ncRNA chr18-2896 chr18 11453683 11453893 + 8.37 0.000 promoter-TSS (NR_146901) promoter-TSS (NR_146901) -690 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr12-6678 chr12 3076113 3076323 + 8.37 0.000 Intergenic AluJo|SINE|Alu -1137 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr1-10915 chr1 209100550 209100760 + 8.37 0.000 Intergenic Intergenic 128201 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr15-1403 chr15 42242310 42242520 + 8.37 0.000 intron (NM_015497, intron 7 of 19) intron (NM_015497, intron 7 of 19) 31018 NM_015497 25963 Hs.511138 NM_015497 ENSG00000103978 TMEM87A - transmembrane protein 87A protein-coding chr17-3319 chr17 65064585 65064795 + 8.37 0.000 Intergenic Intergenic -7950 NM_006572 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr15-2813 chr15 38524185 38524395 + 8.37 0.000 intron (NM_001306086, intron 3 of 14) L2|LINE|L2 40524 NM_001306086 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr1-3097 chr1 32870557 32870767 + 8.37 0.000 exon (NM_001171940, exon 1 of 6) exon (NM_001171940, exon 1 of 6) 151 NM_001171940 252995 Hs.524234 NM_153756 ENSG00000160097 FNDC5 FRCP2|irisin fibronectin type III domain containing 5 protein-coding chr14-2093 chr14 72613642 72613852 + 8.37 0.000 Intergenic Intergenic 96927 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chrX-3532 chrX 53538571 53538781 + 8.37 0.000 intron (NM_031407, intron 76 of 83) intron (NM_031407, intron 76 of 83) 17665 NR_029513 407054 NR_029513 ENSG00000271886 MIR98 MIRLET7L|MIRN98|hsa-mir-98|miR-98 microRNA 98 ncRNA chr16-2282 chr16 3494684 3494894 + 8.37 0.000 exon (NM_001353382, exon 2 of 3) exon (NM_001353382, exon 2 of 3) 700 NM_001080524 646174 Hs.632224 NM_001080524 ENSG00000215131 C16orf90 - chromosome 16 open reading frame 90 protein-coding chr3-2357 chr3 157573629 157573839 + 8.37 0.000 intron (NM_001130002, intron 4 of 4) intron (NM_001130002, intron 4 of 4) 30390 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr9-5293 chr9 84559730 84559940 + 8.37 0.000 Intergenic LTR78|LTR|ERV1 -108623 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr3-2151 chr3 127672915 127673125 + 8.37 0.000 promoter-TSS (NM_032548) promoter-TSS (NM_032548) 68 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr1-14305 chr1 39183753 39183963 + 8.37 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 99691 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr15-2722 chr15 95127453 95127663 + 8.37 0.000 Intergenic Intergenic 199542 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr16-6983 chr16 87148356 87148566 + 8.37 0.000 Intergenic L1M4a1|LINE|L1 -63654 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr20-2727 chr20 49268635 49268845 + 8.37 0.000 intron (NM_021035, intron 3 of 13) L1PA15|LINE|L1 9317 NM_021035 57169 Hs.371794 NM_021035 ENSG00000124201 ZNFX1 - zinc finger NFX1-type containing 1 protein-coding chr11-5213 chr11 14259643 14259853 + 8.37 0.000 intron (NM_006108, intron 13 of 15) intron (NM_006108, intron 13 of 15) 98737 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr2-12529 chr2 65794008 65794218 + 8.37 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -361514 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr15-2733 chr15 98723215 98723425 + 8.37 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) -61106 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr16-3810 chr16 50456430 50456640 + 8.37 0.000 Intergenic LTR16C|LTR|ERVL -61402 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA chr10-3944 chr10 98910470 98910680 + 8.37 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) 13993 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr7-7810 chr7 2439215 2439425 + 8.37 0.000 3' UTR (NM_018641, exon 2 of 2) 3' UTR (NM_018641, exon 2 of 2) 35709 NM_001243795 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr12-6903 chr12 23245935 23246145 + 8.37 0.000 Intergenic MSTD|LTR|ERVL-MaLR 70404 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr1-13228 chr1 215226815 215227025 + 8.37 0.000 intron (NM_001017424, intron 6 of 6) L3|LINE|CR1 144183 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr11-9305 chr11 45556203 45556413 + 8.37 0.000 Intergenic L2a|LINE|L2 109314 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr5-5381 chr5 134112375 134112585 + 8.37 0.000 Intergenic Intergenic -2201 NM_003202 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr2-8092 chr2 75392573 75392783 + 8.37 0.000 Intergenic MLT2A2|LTR|ERVL -131390 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr1-7979 chr1 203384254 203384464 + 8.37 0.000 Intergenic L1MC4|LINE|L1 -33237 NM_002023 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr1-5297 chr1 215636429 215636639 + 8.37 0.000 intron (NM_206933, intron 69 of 71) intron (NM_206933, intron 69 of 71) 69230 NM_001319294 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr10-3510 chr10 70946204 70946414 + 8.37 0.000 intron (NR_134313, intron 1 of 2) LTR16C|LTR|ERVL 7256 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr3-2507 chr3 197666329 197666539 + 8.37 0.000 Intergenic Intergenic 8142 NR_030627 100126321 NR_030627 ENSG00000284146 MIR922 MIRN922|hsa-mir-922 microRNA 922 ncRNA chr15-2267 chr15 49830554 49830764 + 8.37 0.000 Intergenic Intergenic 209611 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr15-1363 chr15 75228724 75228934 + 8.37 0.000 intron (NM_001321990, intron 3 of 4) intron (NM_001321990, intron 3 of 4) 861 NM_001321990 105376731 NM_001321990 LOC105376731 - taste receptor cell protein 1-like protein-coding chr7-7023 chr7 130855016 130855226 + 8.37 0.000 Intergenic Intergenic 21689 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr16-5164 chr16 2927078 2927288 + 8.37 0.000 intron (NM_020912, intron 2 of 8) HERVK-int|LTR|ERVK 15204 NM_020912 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr5-4136 chr5 86617892 86618102 + 8.37 0.000 promoter-TSS (NM_001867) promoter-TSS (NM_001867) 56 NM_001867 1350 Hs.430075 NM_001867 ENSG00000127184 COX7C - cytochrome c oxidase subunit 7C protein-coding chr5-3523 chr5 2773241 2773451 + 8.37 0.000 Intergenic Intergenic 21215 NM_001294337 153571 Hs.148486 NM_178569 ENSG00000186493 C5orf38 CEI|IRX2NB chromosome 5 open reading frame 38 protein-coding chr1-6708 chr1 56330526 56330736 + 8.37 0.000 Intergenic L2c|LINE|L2 -84332 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr16-3258 chr16 87936332 87936542 + 8.37 0.000 promoter-TSS (NR_159798) promoter-TSS (NR_159798) 92 NM_001367225 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr20-3187 chr20 46511267 46511477 + 8.37 0.000 intron (NM_001353826, intron 1 of 4) L2|LINE|L2 2200 NM_001270497 55713 Hs.147041 NM_018102 ENSG00000198185 ZNF334 - zinc finger protein 334 protein-coding chr6-4543 chr6 40667665 40667875 + 8.37 0.000 Intergenic Intergenic -80406 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr11-8237 chr11 66472553 66472763 + 8.37 0.000 TTS (NR_120586) TTS (NR_120586) 5753 NM_145065 246330 Hs.656875 NM_145065 ENSG00000174516 PELI3 - pellino E3 ubiquitin protein ligase family member 3 protein-coding chr14-3294 chr14 84672321 84672531 + 8.37 0.000 Intergenic Intergenic -599506 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr5-8014 chr5 87794143 87794353 + 8.37 0.000 Intergenic Intergenic 132206 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr1-12844 chr1 95358389 95358599 + 8.37 0.000 Intergenic MER97c|DNA|hAT-Tip100 -6387 NR_146486 101928169 NR_146486 LINC01650 - long intergenic non-protein coding RNA 1650 ncRNA chr2-6301 chr2 63736296 63736506 + 8.37 0.000 Intergenic Intergenic -104563 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr10-3836 chr10 830109 830319 + 8.37 0.000 intron (NM_001351277, intron 9 of 17) intron (NM_001351277, intron 9 of 17) 101491 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr5-6610 chr5 36788886 36789096 + 8.37 0.000 Intergenic MLT2F|LTR|ERVL 87703 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA chr1-8660 chr1 205933594 205933804 + 8.37 0.000 intron (NM_052934, intron 2 of 20) intron (NM_052934, intron 2 of 20) -1214 NR_110984 103021296 Hs.613648 NR_110983 SLC26A9-AS1 - SLC26A9 and RAB7B antisense RNA 1 ncRNA chr9-3305 chr9 82031685 82031895 + 8.37 0.000 Intergenic Intergenic 43018 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr6-5847 chr6 35317084 35317294 + 8.37 0.000 intron (NM_022047, intron 5 of 10) MIRb|SINE|MIR 19371 NM_022047 50619 Hs.15476 NM_022047 ENSG00000023892 DEF6 IBP|SLAT|SWAP70L DEF6 guanine nucleotide exchange factor protein-coding chr2-7464 chr2 14864805 14865015 + 8.37 0.000 Intergenic Intergenic 232193 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr16-4176 chr16 10668234 10668444 + 8.37 0.000 intron (NM_144674, intron 5 of 6) MER113|DNA|hAT-Charlie 26591 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr2-5049 chr2 241659480 241659690 + 8.37 0.000 intron (NM_013325, intron 7 of 12) intron (NM_013325, intron 7 of 12) 21892 NM_013325 23192 Hs.283610 NM_013325 ENSG00000168397 ATG4B APG4B|AUTL1 autophagy related 4B cysteine peptidase protein-coding chr7-5492 chr7 43153410 43153620 + 8.37 0.000 intron (NR_135295, intron 5 of 6) L1MD|LINE|L1 2620 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr1-5304 chr1 218772765 218772975 + 8.37 0.000 intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 145641 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chr6-7014 chr6 22535848 22536058 + 8.37 0.000 Intergenic Intergenic -33613 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr11-9155 chr11 34614251 34614461 + 8.37 0.000 Intergenic Intergenic -6737 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr13-4312 chr13 100334111 100334321 + 8.37 0.000 intron (NR_148031, intron 17 of 22) intron (NR_148031, intron 17 of 22) 146799 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr3-3596 chr3 69451356 69451566 + 8.37 0.000 Intergenic Intergenic -65373 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr5-8251 chr5 111504627 111504837 + 8.37 0.000 intron (NM_001308061, intron 2 of 4) intron (NM_001308061, intron 2 of 4) -7494 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr16-3656 chr16 88323750 88323960 + 8.37 0.000 Intergenic Intergenic -103616 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr6-6979 chr6 18689607 18689817 + 8.37 0.000 intron (NR_149116, intron 6 of 7) intron (NR_149116, intron 6 of 7) 117928 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr5-8675 chr5 141080791 141081001 + 8.37 0.000 Intergenic Intergenic -2865 NR_105056 101926905 Hs.570900 NR_105056 LOC101926905 - uncharacterized LOC101926905 ncRNA chr13-3376 chr13 80707951 80708161 + 8.37 0.000 Intergenic L1P1|LINE|L1 -310335 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA chr7-5908 chr7 96876294 96876504 + 8.37 0.000 Intergenic L1M1|LINE|L1 -129154 NM_005222 1750 Hs.249196 NM_005222 ENSG00000006377 DLX6 - distal-less homeobox 6 protein-coding chr17-8595 chr17 80615018 80615228 + 8.37 0.000 intron (NM_020761, intron 1 of 33) L2a|LINE|L2 70285 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr4-8035 chr4 119115752 119115962 + 8.37 0.000 Intergenic Intergenic -19927 NM_016599 51778 Hs.732122 NM_016599 ENSG00000172399 MYOZ2 C4orf5|CMH16|CS-1|FATZ-2 myozenin 2 protein-coding chr9-8211 chr9 109025863 109026073 + 8.37 0.000 intron (NM_032012, intron 17 of 17) intron (NM_032012, intron 17 of 17) -12469 NM_003798 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr2-12867 chr2 97012325 97012535 + 8.37 0.000 Intergenic Intergenic -25850 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr5-6735 chr5 76403394 76403604 + 8.37 0.000 5' UTR (NM_006633, exon 1 of 36) 5' UTR (NM_006633, exon 1 of 36) 214 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr15-3224 chr15 73570417 73570627 + 8.37 0.000 promoter-TSS (NR_103844) promoter-TSS (NR_103844) -979 NR_103844 101241892 Hs.656678 NR_103844 ENSG00000281183 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1 ncRNA chr10-2482 chr10 30537261 30537471 + 8.37 0.000 Intergenic AluJr|SINE|Alu 92387 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr4-3293 chr4 144948040 144948250 + 8.37 0.000 Intergenic Intergenic 149237 NM_001318367 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr12-2322 chr12 132838559 132838769 + 8.37 0.000 Intergenic Intergenic -9795 NM_001172557 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr7-2940 chr7 143352177 143352387 + 8.37 0.000 TTS (NM_000083) TTS (NM_000083) 9798 NM_014690 9715 Hs.648908 NM_014690 ENSG00000159784 FAM131B - family with sequence similarity 131 member B protein-coding chr2-12310 chr2 47169189 47169399 + 8.37 0.000 intron (NM_001305625, intron 2 of 5) intron (NM_001305625, intron 2 of 5) 4913 NM_001305626 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr11-8249 chr11 67434207 67434417 + 8.37 0.000 intron (NM_003952, intron 12 of 14) (CAGTGGC)n|Simple_repeat|Simple_repeat 3370 NM_005608 5790 Hs.155975 NM_005608 ENSG00000213402 PTPRCAP CD45-AP|LPAP protein tyrosine phosphatase receptor type C associated protein protein-coding chr1-6457 chr1 18948649 18948859 + 8.37 0.000 intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) 7922 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr1-15084 chr1 97678567 97678777 + 8.37 0.000 intron (NM_000110, intron 8 of 22) intron (NM_000110, intron 8 of 22) -118249 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr18-1412 chr18 2874905 2875115 + 8.37 0.000 intron (NM_032048, intron 2 of 7) intron (NM_032048, intron 2 of 7) 28004 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr12-3978 chr12 15915785 15915995 + 8.37 0.000 intron (NM_015954, intron 1 of 8) MIRb|SINE|MIR 4558 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr11-4394 chr11 77226371 77226581 + 8.37 0.000 intron (NM_182833, intron 16 of 16) MLT1B|LTR|ERVL-MaLR 75190 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr20-837 chr20 28889768 28889978 + 8.37 0.000 Intergenic Intergenic -190517 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr17-4457 chr17 55162162 55162372 + 8.37 0.000 3' UTR (NM_178509, exon 18 of 18) 3' UTR (NM_178509, exon 18 of 18) -102693 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr10-6792 chr10 6339032 6339242 + 8.37 0.000 Intergenic Intergenic -11179 NR_148966 399716 Hs.737229 NR_148966 LINC02656 - long intergenic non-protein coding RNA 2656 ncRNA chr7-9542 chr7 140402362 140402572 + 8.37 0.000 Intergenic Intergenic -1591 NM_001008749 401409 Hs.583545 NM_001008749 ENSG00000146955 RAB19 RAB19B RAB19, member RAS oncogene family protein-coding chr3-10056 chr3 106006062 106006272 + 8.37 0.000 Intergenic MER21C|LTR|ERVL -136766 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr22-1989 chr22 22949923 22950133 + 8.37 0.000 Intergenic Intergenic 62212 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr9-4109 chr9 131489885 131490095 + 8.37 0.000 promoter-TSS (NR_002914).2 promoter-TSS (NR_002914).2 -496 NR_002914 26786 NR_002914 ENSG00000235284 SNORD62A RNU62|U62|U62A small nucleolar RNA, C/D box 62A snoRNA chr5-4746 chr5 52257683 52257893 + 8.37 0.000 Intergenic MER45B|DNA|hAT-Tip100 249757 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr14-3188 chr14 71965592 71965802 + 8.37 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 32170 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr16-3907 chr16 80197579 80197789 + 8.37 0.000 intron (NR_120307, intron 2 of 5) MLT1I|LTR|ERVL-MaLR -343050 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr12-5057 chr12 90378746 90378956 + 8.37 0.000 Intergenic Intergenic 85533 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr4-3776 chr4 96253849 96254059 + 8.37 0.000 Intergenic Intergenic -56749 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr21-449 chr21 42534100 42534310 + 8.37 0.000 intron (NM_001320537, intron 3 of 19) L1ME3|LINE|L1 20353 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr7-7833 chr7 4260865 4261075 + 8.37 0.000 intron (NM_001079653, intron 18 of 19) intron (NM_001079653, intron 18 of 19) -126133 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr6-6357 chr6 58259812 58260022 + 8.37 0.000 Intergenic SATR1|Satellite|Satellite -298471 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr2-3622 chr2 112096132 112096342 + 8.37 0.000 intron (NM_001329914, intron 11 of 18) MER92B|LTR|ERV1 40968 NM_032824 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr10-5595 chr10 93113657 93113867 + 8.37 0.000 Intergenic Intergenic 39869 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr14-1618 chr14 102316724 102316934 + 8.37 0.000 promoter-TSS (NM_001267827) promoter-TSS (NM_001267827) -548 NM_001267827 55778 Hs.743359 NM_018335 ENSG00000022976 ZNF839 C14orf131 zinc finger protein 839 protein-coding chr2-12341 chr2 48982132 48982342 + 8.37 0.000 intron (NM_000145, intron 8 of 9) intron (NM_000145, intron 8 of 9) -77366 NR_107011 102465854 NR_107011 ENSG00000212036 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA chr19-7061 chr19 53915368 53915578 + 8.37 0.000 exon (NM_031896, exon 3 of 5) exon (NM_031896, exon 3 of 5) 2736 NM_031896 59284 Hs.631597 NM_031896 ENSG00000105605 CACNG7 - calcium voltage-gated channel auxiliary subunit gamma 7 protein-coding chr2-4879 chr2 113843549 113843759 + 8.37 0.000 intron (NR_110174, intron 2 of 4) intron (NR_110174, intron 2 of 4) -46280 NR_102318 10096 Hs.433512 NM_005721 ENSG00000115091 ACTR3 ARP3 actin related protein 3 protein-coding chr7-4345 chr7 45659153 45659363 + 8.37 0.000 intron (NM_001281768, intron 7 of 9) intron (NM_001281768, intron 7 of 9) 84890 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr1-14402 chr1 44480142 44480352 + 8.37 0.000 intron (NM_001319957, intron 1 of 13) AluJb|SINE|Alu 56246 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr5-2771 chr5 169971202 169971412 + 8.37 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 9188 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr10-8690 chr10 101367663 101367873 + 8.37 0.000 intron (NM_003939, intron 1 of 13) L1ME3A|LINE|L1 13603 NM_033637 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr14-1906 chr14 104099749 104099959 + 8.37 0.000 intron (NM_001080464, intron 6 of 15) intron (NM_001080464, intron 6 of 15) 14154 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr6-2786 chr6 142951780 142951990 + 8.37 0.000 Intergenic Intergenic -6709 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr21-814 chr21 32886826 32887036 + 8.37 0.000 Intergenic Intergenic -71957 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA chr12-6818 chr12 12909230 12909440 + 8.37 0.000 intron (NM_003979, intron 2 of 3) MIR3|SINE|MIR -6494 NR_030345 693199 NR_030345 ENSG00000283759 MIR614 MIRN614|hsa-mir-614 microRNA 614 ncRNA chr10-8053 chr10 64803600 64803810 + 8.37 0.000 Intergenic ERVL-B4-int|LTR|ERVL -21823 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr2-13976 chr2 189328192 189328402 + 8.37 0.000 Intergenic Intergenic -113136 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr9-6005 chr9 135241798 135242008 + 8.37 0.000 Intergenic Intergenic 60294 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chr20-1721 chr20 40395555 40395765 + 8.37 0.000 Intergenic LTR16B1|LTR|ERVL 293576 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr5-6037 chr5 170206175 170206385 + 8.37 0.000 Intergenic MIRb|SINE|MIR -7139 NR_108022 100507267 Hs.634846 NR_108022 LINC01187 CTB-27N1.1|KIDR long intergenic non-protein coding RNA 1187 ncRNA chr4-3844 chr4 125832217 125832427 + 8.37 0.000 Intergenic L1PA17|LINE|L1 325063 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chrX-2177 chrX 38919383 38919593 + 8.37 0.000 Intergenic Intergenic -115605 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr2-3417 chr2 60550281 60550491 + 8.37 0.000 intron (NM_138559, intron 1 of 4) CpG 3112 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr1-4631 chr1 168342698 168342908 + 8.37 0.000 Intergenic Intergenic -32721 NR_030284 693142 NR_030284 ENSG00000207974 MIR557 MIRN557|hsa-mir-557 microRNA 557 ncRNA chr12-6925 chr12 25090021 25090231 + 8.37 0.000 exon (NM_001204126, exon 12 of 20) exon (NM_001204126, exon 12 of 20) 37420 NM_001204126 4033 Hs.124922 NM_006152 ENSG00000118308 LRMP JAW1 lymphoid restricted membrane protein protein-coding chr3-8600 chr3 162125881 162126091 + 8.37 0.000 Intergenic MIR|SINE|MIR 629178 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr3-4521 chr3 115381524 115381734 + 8.37 0.000 Intergenic Intergenic -234341 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr13-3292 chr13 47699688 47699898 + 8.37 0.000 Intergenic Intergenic 232829 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr22-2004 chr22 29498260 29498470 + 8.37 0.000 Intergenic L1M5|LINE|L1 18147 NM_021076 4744 Hs.198760 NM_021076 ENSG00000100285 NEFH CMT2CC|NFH neurofilament heavy protein-coding chr10-5663 chr10 98008351 98008561 + 8.37 0.000 intron (NM_001206528, intron 2 of 14) intron (NM_001206528, intron 2 of 14) 22165 NM_018058 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr5-4172 chr5 103581036 103581246 + 8.37 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -18352 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr5-7255 chr5 11305667 11305877 + 8.37 0.000 intron (NM_001288715, intron 8 of 20) intron (NM_001288715, intron 8 of 20) 283145 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr10-5669 chr10 98380794 98381004 + 8.37 0.000 Intergenic Intergenic 14408 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr5-7821 chr5 66743369 66743579 + 8.37 0.000 intron (NM_001290228, intron 1 of 4) intron (NM_001290228, intron 1 of 4) -85299 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr3-4762 chr3 102550001 102550211 + 8.37 0.000 Intergenic Intergenic 115091 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr1-12227 chr1 212047646 212047856 + 8.37 0.000 intron (NM_001286229, intron 4 of 12) AluSx|SINE|Alu 4300 NR_026911 100131205 Hs.126774 NR_026911 ENSG00000220749 RPL21P28 RPL21_8_160 ribosomal protein L21 pseudogene 28 pseudo chr14-2539 chr14 21910423 21910633 + 8.37 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -239511 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr1-6572 chr1 33182686 33182896 + 8.37 0.000 promoter-TSS (NM_018207) promoter-TSS (NM_018207) -748 NM_018207 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr16-4403 chr16 50573057 50573267 + 8.37 0.000 intron (NM_033119, intron 3 of 9) intron (NM_033119, intron 3 of 9) 24766 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chrX-744 chrX 13419074 13419284 + 8.37 0.000 Intergenic Intergenic 83938 NR_045260 100133123 Hs.449499 NR_045260 ENSG00000226985 LINC01203 - long intergenic non-protein coding RNA 1203 ncRNA chrX-1881 chrX 129763316 129763526 + 8.37 0.000 intron (NM_003399, intron 19 of 20) AluJo|SINE|Alu -16528 NM_018990 54440 Hs.61469 NM_018990 ENSG00000122122 SASH3 753P9|CXorf9|HACS2|SH3D6C|SLY SAM and SH3 domain containing 3 protein-coding chr9-7047 chr9 123374961 123375171 + 8.37 0.000 intron (NM_173689, intron 11 of 12) intron (NM_173689, intron 11 of 12) 6287 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr4-6612 chr4 1068842 1069052 + 8.37 0.000 intron (NM_001366918, intron 9 of 10) AluSz6|SINE|Alu 44617 NM_194439 285498 Hs.248290 NM_194439 ENSG00000178222 RNF212 ZHP3 ring finger protein 212 protein-coding chr5-6363 chr5 138521125 138521335 + 8.37 0.000 intron (NR_157090, intron 2 of 9) L1MB2|LINE|L1 20481 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr5-8387 chr5 124395459 124395669 + 8.37 0.000 intron (NR_125774, intron 3 of 5) intron (NR_125774, intron 3 of 5) 42956 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr10-4914 chr10 22246669 22246879 + 8.37 0.000 Intergenic L2b|LINE|L2 -5298 NR_038921 100130992 Hs.48501 NR_038921 LOC100130992 - uncharacterized LOC100130992 ncRNA chr1-5867 chr1 2144038 2144248 + 8.37 0.000 intron (NR_146911, intron 2 of 15) intron (NR_146911, intron 2 of 15) 39427 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr5-3615 chr5 130871233 130871443 + 8.37 0.000 Intergenic L1M3d|LINE|L1 293918 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr18-1446 chr18 35732877 35733087 + 8.37 0.000 Intergenic Intergenic 78413 NM_020474 2589 Hs.514806 NM_020474 ENSG00000141429 GALNT1 GALNAC-T1 polypeptide N-acetylgalactosaminyltransferase 1 protein-coding chr3-8201 chr3 43996510 43996720 + 8.37 0.000 Intergenic CpG -117597 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr17-4490 chr17 67327288 67327498 + 8.37 0.000 Intergenic LTR5_Hs|LTR|ERVK 39184 NM_174871 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chrX-1047 chrX 110086865 110087075 + 8.37 0.000 intron (NM_001353850, intron 3 of 7) intron (NM_001353850, intron 3 of 7) 4852 NR_039774 100616491 NR_039774 ENSG00000265584 MIR3978 - microRNA 3978 ncRNA chr11-6933 chr11 110944072 110944282 + 8.37 0.000 Intergenic (ATTC)n|Simple_repeat|Simple_repeat 153141 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr10-8461 chr10 87374076 87374286 + 8.37 0.000 Intergenic Intergenic 16461 NM_001009610 728130 Hs.710565 NM_001009610 ENSG00000214562 NUTM2D FAM22D NUT family member 2D protein-coding chr20-4352 chr20 55447795 55448005 + 8.37 0.000 Intergenic HERV16-int|LTR|ERVL -20703 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA chr17-4261 chr17 60357686 60357896 + 8.37 0.000 intron (NM_032582, intron 1 of 33) AluSq2|SINE|Alu 34342 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr21-398 chr21 38755785 38755995 + 8.37 0.000 intron (NR_027065, intron 1 of 6) intron (NR_027065, intron 1 of 6) 13084 NR_027066 400866 Hs.278704 NM_001001789 ENSG00000223806 LINC00114 C21orf24|NCRNA00114 long intergenic non-protein coding RNA 114 ncRNA chr7-7959 chr7 11987034 11987244 + 8.37 0.000 Intergenic Intergenic -154941 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr10-782 chr10 48306520 48306730 + 8.37 0.000 promoter-TSS (NR_136585) promoter-TSS (NR_136585) -14 NM_001278547 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr6-4134 chr6 164147737 164147947 + 8.37 0.000 Intergenic THE1B|LTR|ERVL-MaLR -476358 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr14-3113 chr14 65605704 65605914 + 8.37 0.000 intron (NM_178156, intron 2 of 9) L1ME3Cz|LINE|L1 134707 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr1-4935 chr1 46396595 46396805 + 8.37 0.000 intron (NM_001441, intron 1 of 14) LTR5B|LTR|ERVK 2383 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chrX-2270 chrX 48704687 48704897 + 8.37 0.000 intron (NM_003173, intron 3 of 5) L2c|LINE|L2 8058 NM_003173 6839 Hs.522639 NM_003173 ENSG00000101945 SUV39H1 H3-K9-HMTase 1|KMT1A|MG44|SUV39H suppressor of variegation 3-9 homolog 1 protein-coding chr5-7960 chr5 81226502 81226712 + 8.37 0.000 3' UTR (NM_006909, exon 27 of 27) 3' UTR (NM_006909, exon 27 of 27) -6713 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr20-2120 chr20 33462970 33463180 + 8.37 0.000 Intergenic Intergenic -19183 NM_003098 6640 Hs.31121 NM_003098 ENSG00000101400 SNTA1 LQT12|SNT1|TACIP1|dJ1187J4.5 syntrophin alpha 1 protein-coding chr5-3607 chr5 115649373 115649583 + 8.37 0.000 intron (NR_104674, intron 3 of 4) L2c|LINE|L2 23174 NR_104674 102467217 Hs.147738 NR_104674 LOC102467217 - uncharacterized LOC102467217 ncRNA chr19-5087 chr19 55106316 55106526 + 8.37 0.000 intron (NM_001271618, intron 3 of 21) L1M5|LINE|L1 11216 NM_017607 54776 Hs.631579 NM_017607 ENSG00000125503 PPP1R12C AAVS1|LENG3|MBS85|p84|p85 protein phosphatase 1 regulatory subunit 12C protein-coding chr2-6700 chr2 25196490 25196700 + 8.37 0.000 Intergenic Intergenic -7718 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr11-4025 chr11 9093663 9093873 + 8.37 0.000 promoter-TSS (NR_027713) promoter-TSS (NR_027713) -595 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr2-13387 chr2 138617548 138617758 + 8.37 0.000 Intergenic Intergenic 115883 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr8-6747 chr8 90165056 90165266 + 8.37 0.000 Intergenic Intergenic -56327 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr3-8149 chr3 30541771 30541981 + 8.37 0.000 Intergenic L2|LINE|L2 23008 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr1-2983 chr1 172675022 172675232 + 8.37 0.000 Intergenic Intergenic 16024 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr2-8152 chr2 84178116 84178326 + 8.37 0.000 Intergenic Intergenic -112461 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr11-4889 chr11 47101474 47101684 + 8.37 0.000 intron (NM_001003677, intron 3 of 8) intron (NM_001003677, intron 3 of 8) 75300 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr6-4926 chr6 98497161 98497371 + 8.37 0.000 Intergenic AluSx1|SINE|Alu 334434 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr15-2860 chr15 41682651 41682861 + 8.37 0.000 intron (NM_001164273, intron 2 of 23) AluSz|SINE|Alu -8829 NR_030356 693211 NR_030356 ENSG00000207766 MIR626 MIRN626|hsa-mir-626 microRNA 626 ncRNA chr5-4253 chr5 137609198 137609408 + 8.37 0.000 Intergenic LTR16A|LTR|ERVL 38346 NR_030588 100126343 NR_030588 ENSG00000216009 MIR874 MIRN874|hsa-mir-874|mir-874 microRNA 874 ncRNA chr16-3885 chr16 74691611 74691821 + 8.37 0.000 intron (NM_152649, intron 3 of 10) intron (NM_152649, intron 3 of 10) 9146 NM_152649 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr17-5317 chr17 28046869 28047079 + 8.37 0.000 intron (NM_016231, intron 1 of 10) intron (NM_016231, intron 1 of 10) 4297 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr9-4252 chr9 93024390 93024600 + 8.37 0.000 intron (NM_001369952, intron 13 of 16) intron (NM_001369952, intron 13 of 16) -9551 NR_121565 101927954 Hs.673794 NR_121565 LOC101927954 - uncharacterized LOC101927954 ncRNA chr15-3909 chr15 27048892 27049102 + 8.37 0.000 intron (NM_001270873, intron 3 of 5) intron (NM_001270873, intron 3 of 5) 77816 NM_033223 2567 Hs.569475 NM_033223 ENSG00000182256 GABRG3 - gamma-aminobutyric acid type A receptor gamma3 subunit protein-coding chr5-4074 chr5 58851853 58852063 + 8.37 0.000 3' UTR (NM_001317915, exon 5 of 5) 3' UTR (NM_001317915, exon 5 of 5) 147940 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-8445 chr1 100597151 100597361 + 8.37 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 49748 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr3-4113 chr3 112589827 112590037 + 8.37 0.000 Intergenic L1M3|LINE|L1 12037 NR_109779 100506621 Hs.86538 NR_109779 LINC01279 - long intergenic non-protein coding RNA 1279 ncRNA chr5-3310 chr5 124453723 124453933 + 8.37 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -15308 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr1-11100 chr1 229852211 229852421 + 8.37 0.000 Intergenic Intergenic 33502 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr4-4255 chr4 19338148 19338358 + 8.37 0.000 Intergenic MER5A|DNA|hAT-Charlie -913652 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr8-6384 chr8 54560532 54560742 + 8.37 0.000 Intergenic Intergenic -55459 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chrX-1918 chrX 150665467 150665677 + 8.37 0.000 intron (NM_000252, intron 14 of 14) intron (NM_000252, intron 14 of 14) -27390 NM_001353994 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr2-11116 chr2 132592853 132593063 + 8.37 0.000 intron (NM_001508, intron 1 of 1) MER77B|LTR|ERVL 77247 NM_001321235 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr9-4089 chr9 127743863 127744073 + 8.37 0.000 intron (NM_001252334, intron 7 of 11) intron (NM_001252334, intron 7 of 11) -8674 NM_001134430 27433 Hs.444106 NM_130459 ENSG00000160404 TOR2A TORP1 torsin family 2 member A protein-coding chr3-8371 chr3 87505832 87506042 + 8.37 0.000 Intergenic Intergenic -229353 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr11-7007 chr11 117591064 117591274 + 8.37 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 206047 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr3-4508 chr3 97971926 97972136 + 8.37 0.000 5' UTR (NM_032778, exon 1 of 10) 5' UTR (NM_032778, exon 1 of 10) 400 NM_153182 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr7-2945 chr7 149813241 149813451 + 8.37 0.000 intron (NR_163594, intron 66 of 102) intron (NR_163594, intron 66 of 102) -25029 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding chr5-5099 chr5 99185835 99186045 + 8.37 0.000 Intergenic Intergenic -256226 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr10-6597 chr10 86393909 86394119 + 8.37 0.000 Intergenic L1ME3Cz|LINE|L1 -27219 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr2-1878 chr2 55223526 55223736 + 8.37 0.000 intron (NR_148543, intron 1 of 5) CpG -8272 NM_001135592 6233 Hs.311640 NM_002954 ENSG00000143947 RPS27A CEP80|HEL112|S27A|UBA80|UBC|UBCEP1|UBCEP80 ribosomal protein S27a protein-coding chr20-819 chr20 51345581 51345791 + 8.37 0.000 Intergenic Intergenic 107291 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr9-6922 chr9 93906998 93907208 + 8.37 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 48252 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr5-5969 chr5 118828260 118828470 + 8.37 0.000 Intergenic Intergenic -146221 NR_128710 103504734 NR_128710 ENSG00000283475 MIR1244-4 hsa-mir-1244-4 microRNA 1244-4 ncRNA chr20-2437 chr20 24260380 24260590 + 8.37 0.000 Intergenic Intergenic 60718 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr7-4468 chr7 135230995 135231205 + 8.37 0.000 promoter-TSS (NM_182489) promoter-TSS (NM_182489) -879 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr3-3646 chr3 124859013 124859223 + 8.37 0.000 intron (NM_001354766, intron 3 of 13) intron (NM_001354766, intron 3 of 13) 28247 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr2-5004 chr2 218957754 218957964 + 8.37 0.000 Intergenic Intergenic -1807 NM_003936 8941 Hs.158460 NM_003936 ENSG00000171450 CDK5R2 NCK5AI|P39|p39nck5ai cyclin dependent kinase 5 regulatory subunit 2 protein-coding chr1-14762 chr1 68120391 68120601 + 8.37 0.000 intron (NR_040077, intron 7 of 9) MIR1_Amn|SINE|MIR 63114 NR_031664 100302279 NR_031664 ENSG00000221203 MIR1262 MIRN1262|hsa-mir-1262|mir-1262 microRNA 1262 ncRNA chr5-7733 chr5 59511837 59512047 + 8.37 0.000 intron (NM_001349242, intron 1 of 16) intron (NM_001349242, intron 1 of 16) 74556 NM_001349242 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-8306 chr1 45569947 45570157 + 8.37 0.000 TTS (NM_001202413) TTS (NM_001202413) -13936 NM_001195193 4678 Hs.319334 NM_002482 ENSG00000132780 NASP FLB7527|HMDRA1|PRO1999 nuclear autoantigenic sperm protein protein-coding chr7-2776 chr7 73359265 73359475 + 8.37 0.000 TTS (NM_003602) TTS (NM_003602) 31209 NM_001281304 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr1-6004 chr1 52669721 52669931 + 8.37 0.000 TTS (NR_135157) TTS (NR_135157) 28521 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chr6-4540 chr6 40353288 40353498 + 8.37 0.000 intron (NR_038887, intron 1 of 2) intron (NR_038887, intron 1 of 2) 2613 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr1-12403 chr1 9865865 9866075 + 8.37 0.000 intron (NM_020248, intron 5 of 5) intron (NM_020248, intron 5 of 5) -41444 NM_001009566 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr22-2717 chr22 38401779 38401989 + 8.37 0.000 Intergenic Intergenic -2958 NR_002821 400927 Hs.720223 NR_002821 TPTEP2 Z98749.2 TPTE pseudogene 2 pseudo chr7-3577 chr7 22726911 22727121 + 8.37 0.000 promoter-TSS (NM_001318095) promoter-TSS (NM_001318095) -184 NM_001318095 3569 Hs.654458 NM_000600 ENSG00000136244 IL6 BSF-2|BSF2|CDF|HGF|HSF|IFN-beta-2|IFNB2|IL-6 interleukin 6 protein-coding chr16-3343 chr16 12095880 12096090 + 8.37 0.000 intron (NM_032167, intron 11 of 20) intron (NM_032167, intron 11 of 20) 119251 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr1-8475 chr1 116915409 116915619 + 8.37 0.000 intron (NM_020440, intron 1 of 8) intron (NM_020440, intron 1 of 8) 5598 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr8-6611 chr8 74522968 74523178 + 8.37 0.000 Intergenic L1MA3|LINE|L1 -25470 NR_049860 100847058 NR_049860 ENSG00000266502 MIR5681A - microRNA 5681a ncRNA chr1-6085 chr1 110188549 110188759 + 8.37 0.000 intron (NM_001010898, intron 6 of 11) L2c|LINE|L2 21333 NR_046546 100873974 Hs.130515 NR_046546 LINC02586 KCNC4-AS1 long intergenic non-protein coding RNA 2586 ncRNA chr15-3662 chr15 98983386 98983596 + 8.37 0.000 intron (NM_001167902, intron 2 of 4) intron (NM_001167902, intron 2 of 4) 22165 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr3-7129 chr3 184345777 184345987 + 8.37 0.000 TTS (NM_004366) TTS (NM_004366) 7049 NM_001366133 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr11-3706 chr11 9077236 9077446 + 8.37 0.000 intron (NM_001367977, intron 3 of 22) intron (NM_001367977, intron 3 of 22) 13038 NR_049874 100847015 NR_049874 ENSG00000264984 MIR5691 - microRNA 5691 ncRNA chr6-6448 chr6 101332799 101333009 + 8.37 0.000 Intergenic L1MEc|LINE|L1 -66081 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr12-3921 chr12 130880299 130880509 + 8.37 0.000 Intergenic Intergenic 8338 NM_006325 5901 Hs.10842 NM_006325 ENSG00000132341 RAN ARA24|Gsp1|TC4 RAN, member RAS oncogene family protein-coding chr11-5507 chr11 83501870 83502080 + 8.37 0.000 intron (NM_001142699, intron 21 of 27) intron (NM_001142699, intron 21 of 27) 180450 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr3-1810 chr3 48212181 48212391 + 8.37 0.000 Intergenic SVA_F|Retroposon|SVA -11209 NM_004345 820 Hs.51120 NM_004345 ENSG00000164047 CAMP CAP-18|CAP18|CRAMP|FALL-39|FALL39|HSD26|LL37 cathelicidin antimicrobial peptide protein-coding chr11-8821 chr11 11890751 11890961 + 8.37 0.000 intron (NM_001282659, intron 3 of 27) L1PA10|LINE|L1 49433 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr2-5581 chr2 172931374 172931584 + 8.37 0.000 intron (NM_001282901, intron 1 of 24) intron (NM_001282901, intron 1 of 24) 3274 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr2-5672 chr2 201550758 201550968 + 8.37 0.000 intron (NM_001168221, intron 9 of 15) intron (NM_001168221, intron 9 of 15) 68315 NM_001168217 151254 Hs.335788 NM_152525 ENSG00000155754 C2CD6 ALS2CR11 C2 calcium dependent domain containing 6 protein-coding chr18-1874 chr18 26756986 26757196 + 8.37 0.000 Intergenic Intergenic -53453 NR_024259 728606 Hs.170599 NR_024259 ENSG00000265369 PCAT18 LINC01092 prostate cancer associated transcript 18 ncRNA chr8-6474 chr8 62438859 62439069 + 8.37 0.000 intron (NM_001304533, intron 1 of 6) L2|LINE|L2 190110 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr5-3555 chr5 46207043 46207253 + 8.37 0.000 Intergenic ALR/Alpha|Satellite|centr -510768 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr7-7361 chr7 56036350 56036560 + 8.37 0.000 intron (NM_001370519, intron 1 of 8) A-rich|Low_complexity|Low_complexity 14989 NM_001370511 5723 Hs.512656 NM_004577 ENSG00000146733 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding chr12-6658 chr12 1197895 1198105 + 8.37 0.000 intron (NM_001301248, intron 11 of 18) AluJb|SINE|Alu 170252 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr3-6951 chr3 161914805 161915015 + 8.37 0.000 Intergenic Intergenic 418102 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr5-5787 chr5 174707160 174707370 + 8.37 0.000 Intergenic MER131|DNA?|DNA? -17317 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr16-4207 chr16 12150133 12150343 + 8.37 0.000 intron (NM_032167, intron 13 of 20) L2|LINE|L2 173504 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr18-1203 chr18 32328364 32328574 + 8.37 0.000 intron (NM_001242409, intron 2 of 5) intron (NM_001242409, intron 2 of 5) 138430 NM_005925 4225 Hs.194777 NM_005925 ENSG00000141434 MEP1B - meprin A subunit beta protein-coding chr12-7339 chr12 55626009 55626219 + 8.37 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -10778 NM_206899 121130 Hs.554551 NM_206899 ENSG00000175398 OR10P1 OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701 olfactory receptor family 10 subfamily P member 1 protein-coding chr2-12953 chr2 102639405 102639615 + 8.37 0.000 intron (NM_003048, intron 1 of 11) Tigger8|DNA|TcMar-Tigger 19957 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr2-8054 chr2 72638967 72639177 + 8.37 0.000 intron (NR_135774, intron 6 of 19) L1P2|LINE|L1 186961 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr10-2841 chr10 44581990 44582200 + 8.37 0.000 Intergenic Intergenic -196998 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr3-3604 chr3 77009951 77010161 + 8.37 0.000 Intergenic Intergenic -30043 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr19-3220 chr19 55614604 55614814 + 8.37 0.000 exon (NM_001195605, exon 1 of 1) exon (NM_001195605, exon 1 of 1) 1116 NM_001195605 100507290 Hs.729114 NM_001195605 ENSG00000261221 ZNF865 - zinc finger protein 865 protein-coding chr12-7052 chr12 40526052 40526262 + 8.37 0.000 intron (NM_173600, intron 108 of 173) intron (NM_173600, intron 108 of 173) 132763 NM_173600 283463 Hs.632712 NM_173600 MUC19 MUC-19 mucin 19, oligomeric protein-coding chr2-7887 chr2 54419378 54419588 + 8.37 0.000 Intergenic Intergenic -36844 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr3-7864 chr3 126113884 126114094 + 8.37 0.000 intron (NR_072979, intron 16 of 20) MIR|SINE|MIR 10349 NR_046602 100874204 Hs.742339 NR_046602 ENSG00000250218 ALDH1L1-AS1 - ALDH1L1 antisense RNA 1 ncRNA chr5-7422 chr5 28593843 28594053 + 8.37 0.000 Intergenic Intergenic -306283 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr2-11302 chr2 190726446 190726656 + 8.37 0.000 Intergenic Intergenic 67393 NM_001321314 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr2-11189 chr2 156448851 156449061 + 8.37 0.000 intron (NM_000408, intron 1 of 16) MLT1D|LTR|ERVL-MaLR 12577 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr11-2897 chr11 61490025 61490235 + 8.37 0.000 intron (NM_145017, intron 12 of 13) intron (NM_145017, intron 12 of 13) 9010 NM_145017 220004 Hs.729003 NM_145017 ENSG00000162148 PPP1R32 C11orf66|IIIG9 protein phosphatase 1 regulatory subunit 32 protein-coding chr9-8149 chr9 102915346 102915556 + 8.37 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -79882 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr1-13190 chr1 206943181 206943391 + 8.37 0.000 intron (NM_002644, intron 1 of 10) MIRb|SINE|MIR 3180 NM_002644 5284 Hs.497589 NM_002644 ENSG00000162896 PIGR - polymeric immunoglobulin receptor protein-coding chr19-5558 chr19 563259 563469 + 8.37 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -7919 NM_198591 682 Hs.501293 NM_001728 ENSG00000172270 BSG 5F7|CD147|EMMPRIN|EMPRIN|OK|SLC7A11|TCSF basigin (Ok blood group) protein-coding chr3-3940 chr3 50118527 50118737 + 8.37 0.000 non-coding (NR_036627, exon 24 of 24) non-coding (NR_036627, exon 24 of 24) -17644 NR_045388 100775107 Hs.439480 NR_045388 ENSG00000281691 RBM5-AS1 LUST RBM5 antisense RNA 1 ncRNA chr9-2660 chr9 36724208 36724418 + 8.37 0.000 Intergenic Intergenic 99286 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr4-4948 chr4 127453439 127453649 + 8.37 0.000 Intergenic L2c|LINE|L2 -179413 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr8-5828 chr8 5023054 5023264 + 8.37 0.000 Intergenic AluSx|SINE|Alu -28245 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr6-3502 chr6 23003821 23004031 + 8.37 0.000 Intergenic Intergenic -286002 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr4-2513 chr4 37293937 37294147 + 8.37 0.000 intron (NM_001144990, intron 1 of 6) intron (NM_001144990, intron 1 of 6) 49299 NM_001144990 57495 Hs.4280 NM_001144990 ENSG00000174145 NWD2 KIAA1239 NACHT and WD repeat domain containing 2 protein-coding chr14-4729 chr14 60446986 60447196 + 8.37 0.000 intron (NM_174978, intron 16 of 17) L1PA6|LINE|L1 38972 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding chr2-9014 chr2 196335408 196335618 + 8.37 0.000 intron (NM_020760, intron 3 of 28) intron (NM_020760, intron 3 of 28) 26664 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr6-8571 chr6 163695932 163696142 + 8.37 0.000 Intergenic MER44D|DNA|TcMar-Tigger -24553 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chrX-4034 chrX 17748045 17748255 + 8.37 0.000 intron (NM_001037540, intron 4 of 7) MER5A|DNA|hAT-Charlie 10657 NM_001037536 6322 Hs.109655 NM_006746 ENSG00000047634 SCML1 - Scm polycomb group protein like 1 protein-coding chr21-1503 chr21 42419963 42420173 + 8.37 0.000 intron (NM_018961, intron 7 of 14) MLT1E1A-int|LTR|ERVL-MaLR 16166 NM_001001895 53347 Hs.473912 NM_018961 ENSG00000160185 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding chr1-12394 chr1 9039160 9039370 + 8.37 0.000 TTS (NM_001135585) TTS (NM_001135585) -12920 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr9-3663 chr9 96216328 96216538 + 8.37 0.000 Intergenic Intergenic -30030 NR_146524 105376162 Hs.662614 NR_146524 ENSG00000232283 HSD17B3-AS1 - HSD17B3 antisense RNA 1 ncRNA chr15-2689 chr15 80531127 80531337 + 8.37 0.000 intron (NM_014862, intron 8 of 18) intron (NM_014862, intron 8 of 18) 31712 NR_120363 101929586 Hs.569426 NR_120363 ENSG00000259175 LOC101929586 - uncharacterized LOC101929586 ncRNA chr7-8351 chr7 43602381 43602591 + 8.37 0.000 intron (NM_004760, intron 2 of 6) intron (NM_004760, intron 2 of 6) 19378 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr4-1808 chr4 38807629 38807839 + 8.37 0.000 Intergenic SVA_D|Retroposon|SVA -2943 NM_003263 7096 Hs.621817 NM_003263 ENSG00000174125 TLR1 CD281|TIL|TIL. LPRS5|rsc786 toll like receptor 1 protein-coding chr4-6372 chr4 108340586 108340796 + 8.37 0.000 Intergenic Intergenic 168571 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr15-4985 chr15 80060191 80060401 + 8.37 0.000 intron (NM_001242914, intron 1 of 6) CpG 136 NM_001242914 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr20-2113 chr20 32574605 32574815 + 8.37 0.000 intron (NM_001256798, intron 1 of 10) intron (NM_001256798, intron 1 of 10) 10623 NM_001256798 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr17-3296 chr17 49529889 49530099 + 8.37 0.000 intron (NR_103773, intron 1 of 2) AluJr|SINE|Alu 19177 NR_106751 102465141 NR_106751 ENSG00000277478 MIR6165 hsa-mir-6165 microRNA 6165 ncRNA chr3-4958 chr3 10933611 10933821 + 8.37 0.000 intron (NM_014229, intron 11 of 13) intron (NM_014229, intron 11 of 13) -59018 NM_001348250 6529 Hs.443874 NM_003042 ENSG00000157103 SLC6A1 GABATHG|GABATR|GAT1|MAE solute carrier family 6 member 1 protein-coding chr1-6147 chr1 172136480 172136690 + 8.37 0.000 TTS (NR_038397) TTS (NR_038397) -2223 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA chr15-2226 chr15 96276842 96277052 + 8.37 0.000 intron (NR_102743, intron 5 of 7) intron (NR_102743, intron 5 of 7) -49099 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chrX-3764 chrX 130047778 130047988 + 8.37 0.000 intron (NM_021946, intron 9 of 11) intron (NM_021946, intron 9 of 11) 42695 NM_021946 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr13-1885 chr13 35929812 35930022 + 8.37 0.000 intron (NM_001330071, intron 4 of 16) intron (NM_001330071, intron 4 of 16) -74056 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr3-5241 chr3 101348971 101349181 + 8.37 0.000 intron (NM_020654, intron 12 of 23) MER5A1|DNA|hAT-Charlie -28501 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr14-4513 chr14 38804783 38804993 + 8.37 0.000 intron (NR_039982, intron 4 of 4) L1MA5|LINE|L1 -77708 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr10-6489 chr10 49114897 49115107 + 8.37 0.000 intron (NM_001031746, intron 1 of 7) intron (NM_001031746, intron 1 of 7) 520 NM_001031746 196740 Hs.522928 NM_144984 ENSG00000165633 VSTM4 C10orf72 V-set and transmembrane domain containing 4 protein-coding chr16-4402 chr16 50506015 50506225 + 8.37 0.000 Intergenic Intergenic -42276 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr20-2845 chr20 62260367 62260577 + 8.37 0.000 intron (NM_001363878, intron 3 of 14) intron (NM_001363878, intron 3 of 14) 21951 NM_001278649 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding chr10-5445 chr10 78588328 78588538 + 8.37 0.000 Intergenic Intergenic 321091 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr5-2166 chr5 112532317 112532527 + 8.37 0.000 Intergenic LTR2|LTR|ERV1 -96014 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr13-2534 chr13 61594484 61594694 + 8.37 0.000 Intergenic AluSq2|SINE|Alu -166643 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr3-9465 chr3 49896973 49897183 + 8.37 0.000 intron (NR_134919, intron 7 of 19) intron (NR_134919, intron 7 of 19) 6559 NM_001318913 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chrX-4473 chrX 62845183 62845393 + 8.37 0.000 Intergenic MIRc|SINE|MIR 506044 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr20-642 chr20 63375792 63376002 + 8.37 0.000 Intergenic Intergenic -14501 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr10-7775 chr10 34971656 34971866 + 8.37 0.000 Intergenic HERVE-int|LTR|ERV1 102522 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr17-3254 chr17 30550722 30550932 + 8.37 0.000 Intergenic Intergenic -25638 NR_015341 107133515 Hs.568209 NR_015341 SMURF2P1-LRRC37BP1 - SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene pseudo chr15-1700 chr15 67548746 67548956 + 8.37 0.000 promoter-TSS (NM_001206804) promoter-TSS (NM_001206804) -243 NM_001206804 5607 Hs.114198 NM_002757 ENSG00000137764 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding chr10-6823 chr10 18261421 18261631 + 8.37 0.000 intron (NM_000724, intron 1 of 12) intron (NM_000724, intron 1 of 12) 804 NM_001330060 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr20-1152 chr20 50439118 50439328 + 8.37 0.000 Intergenic Intergenic -71098 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr12-2969 chr12 110301425 110301635 + 8.37 0.000 intron (NM_170665, intron 5 of 19) L2|LINE|L2 20283 NM_170665 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr2-12741 chr2 84321882 84322092 + 8.37 0.000 Intergenic Intergenic 31305 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr20-1373 chr20 52048921 52049131 + 8.37 0.000 Intergenic Intergenic 56458 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr8-4298 chr8 97356266 97356476 + 8.37 0.000 intron (NR_125390, intron 2 of 2) L4_A_Mam|LINE|RTE-X -1894 NR_145760 109617016 NR_145760 ENSG00000207215 SNORD3H - small nucleolar RNA, C/D box 3H snoRNA chr20-1213 chr20 17558609 17558819 + 8.37 0.000 exon (NM_001278607, exon 1 of 8) exon (NM_001278607, exon 1 of 8) 119 NM_001278606 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr5-2350 chr5 75533883 75534093 + 8.37 0.000 intron (NM_001345921, intron 1 of 13) AluSz|SINE|Alu -22007 NM_001130105 10087 Hs.270437 NM_005713 ENSG00000113163 CERT1 CERT|CERTL|COL4A3BP|GPBP|MRD34|STARD11 ceramide transporter 1 protein-coding chr9-4831 chr9 137352530 137352740 + 8.37 0.000 exon (NM_017820, exon 11 of 22) exon (NM_017820, exon 11 of 22) -50364 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr2-4615 chr2 146387569 146387779 + 8.37 0.000 Intergenic Intergenic -199383 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-11796 chr2 16505925 16506135 + 8.37 0.000 Intergenic Intergenic 159804 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr11-6781 chr11 87430936 87431146 + 8.37 0.000 Intergenic L1MC4a|LINE|L1 288370 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr5-2845 chr5 66621189 66621399 + 8.37 0.000 intron (NM_001290228, intron 1 of 4) intron (NM_001290228, intron 1 of 4) 24901 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr19-4879 chr19 40322396 40322606 + 8.37 0.000 intron (NR_046202, intron 8 of 8) L2b|LINE|L2 25896 NR_046202 126526 Hs.631557 NM_178830 ENSG00000160392 C19orf47 - chromosome 19 open reading frame 47 protein-coding chr17-3180 chr17 79559451 79559661 + 8.37 0.000 intron (NM_001350451, intron 1 of 14) (ATGG)n|Simple_repeat|Simple_repeat -43408 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr18-2983 chr18 23579155 23579365 + 8.37 0.000 intron (NM_000271, intron 1 of 24) intron (NM_000271, intron 1 of 24) 7246 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC|POGZ|SLC65A1 NPC intracellular cholesterol transporter 1 protein-coding chr11-5535 chr11 93409973 93410183 + 8.37 0.000 intron (NM_181645, intron 12 of 13) intron (NM_181645, intron 12 of 13) 79361 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr10-9111 chr10 126836292 126836502 + 8.37 0.000 Intergenic Intergenic -69012 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr10-5540 chr10 86087146 86087356 + 8.37 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 177537 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr14-1472 chr14 21346941 21347151 + 8.37 0.000 intron (NM_020366, intron 22 of 23) intron (NM_020366, intron 22 of 23) 36973 NM_007192 11198 Hs.213724 NM_007192 ENSG00000092201 SUPT16H CDC68|FACTP140|SPT16|SPT16/CDC68 SPT16 homolog, facilitates chromatin remodeling subunit protein-coding chr22-1828 chr22 36745639 36745849 + 8.37 0.000 intron (NR_134623, intron 2 of 3) intron (NR_134623, intron 2 of 3) 30375 NM_006860 11020 Hs.415172 NM_006860 ENSG00000100360 IFT27 BBS19|RABL4|RAYL intraflagellar transport 27 protein-coding chr20-4434 chr20 61394759 61394969 + 8.37 0.000 intron (NM_001794, intron 2 of 15) intron (NM_001794, intron 2 of 15) -104557 NM_001252338 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr7-9296 chr7 127241210 127241420 + 8.37 0.000 intron (NR_163850, intron 1 of 9) intron (NR_163850, intron 1 of 9) 2200 NR_028041 2918 Hs.449625 NM_000845 ENSG00000179603 GRM8 GLUR8|GPRC1H|MGLUR8|mGlu8 glutamate metabotropic receptor 8 protein-coding chr14-4850 chr14 69773708 69773918 + 8.37 0.000 Intergenic Intergenic -6100 NR_029378 100289511 Hs.729250 NR_029378 LOC100289511 - uncharacterized LOC100289511 ncRNA chr3-4557 chr3 143086573 143086783 + 8.37 0.000 Intergenic SVA_D|Retroposon|SVA -33093 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr21-690 chr21 25638718 25638928 + 8.37 0.000 promoter-TSS (NM_021219) promoter-TSS (NM_021219) -435 NM_001270408 58494 Hs.517227 NM_021219 ENSG00000154721 JAM2 C21orf43|CD322|JAM-B|JAMB|PRO245|VE-JAM|VEJAM junctional adhesion molecule 2 protein-coding chr13-4241 chr13 96236181 96236391 + 8.37 0.000 intron (NM_153456, intron 1 of 1) MLT2B3|LTR|ERVL 145447 NM_153456 266722 Hs.171001 NM_153456 ENSG00000185352 HS6ST3 HS6ST-3 heparan sulfate 6-O-sulfotransferase 3 protein-coding chr4-4441 chr4 52890362 52890572 + 8.37 0.000 intron (NM_152540, intron 7 of 8) intron (NM_152540, intron 7 of 8) 28150 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr5-4588 chr5 27846342 27846552 + 8.37 0.000 Intergenic Intergenic 374155 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr11-3844 chr11 69533753 69533963 + 8.37 0.000 Intergenic Intergenic 48297 NR_120545 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr3-8818 chr3 7724860 7725070 + 8.37 0.000 intron (NM_181874, intron 10 of 10) AluJr|SINE|Alu -189681 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr16-2543 chr16 28258926 28259136 + 8.37 0.000 Intergenic Intergenic -33494 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr5-7546 chr5 38467601 38467811 + 8.37 0.000 Intergenic Intergenic 22160 NM_182801 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr16-3011 chr16 30358292 30358502 + 8.37 0.000 exon (NM_015527, exon 9 of 9) exon (NM_015527, exon 9 of 9) -3089 NM_006110 10421 Hs.202677 NM_006110 ENSG00000169217 CD2BP2 FWP010|LIN1|PPP1R59|Snu40|U5-52K CD2 cytoplasmic tail binding protein 2 protein-coding chr4-4017 chr4 1878436 1878646 + 8.37 0.000 intron (NM_001042424, intron 1 of 21) L2a|LINE|L2 7148 NM_001042424 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr20-2237 chr20 142610 142820 + 8.37 0.000 intron (NM_030931, intron 1 of 1) intron (NM_030931, intron 1 of 1) 125 NM_030931 81623 Hs.124211 NM_030931 ENSG00000125788 DEFB126 C20orf8|DEFB-26|DEFB26|HBD26|bA530N10.1|hBD-26 defensin beta 126 protein-coding chr5-4443 chr5 3036552 3036762 + 8.37 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 118803 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA chr16-2868 chr16 88073132 88073342 + 8.37 0.000 intron (NM_001173539, intron 12 of 12) CpG 27748 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr9-3326 chr9 93658549 93658759 + 8.37 0.000 intron (NM_005392, intron 10 of 21) intron (NM_005392, intron 10 of 21) 63813 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chrX-441 chrX 71341435 71341645 + 8.37 0.000 Intergenic SVA_D|Retroposon|SVA -24699 NM_138923 6872 Hs.158560 NM_004606 ENSG00000147133 TAF1 BA2R|CCG1|CCGS|DYT3|DYT3/TAF1|KAT4|MRXS33|N-TAF1|NSCL2|OF|P250|TAF(II)250|TAF2A|TAFII-250|TAFII250|XDP TATA-box binding protein associated factor 1 protein-coding chr8-2870 chr8 139610083 139610293 + 8.37 0.000 intron (NR_104210, intron 3 of 3) intron (NR_104210, intron 3 of 3) 92935 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr6-2484 chr6 73566011 73566221 + 8.37 0.000 Intergenic AluSx1|SINE|Alu -45084 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr4-3498 chr4 142405283 142405493 + 8.37 0.000 intron (NM_001331040, intron 5 of 25) intron (NM_001331040, intron 5 of 25) 441147 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr6-2317 chr6 111564769 111564979 + 8.37 0.000 intron (NM_147686, intron 7 of 8) intron (NM_147686, intron 7 of 8) 2405 NM_001164283 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr13-1431 chr13 45311471 45311681 + 8.37 0.000 Intergenic Intergenic 24871 NR_145985 109616966 NR_145726 ENSG00000253051 SNORA31B - small nucleolar RNA, H/ACA box 31B snoRNA chr1-3844 chr1 29921782 29921992 + 8.37 0.000 Intergenic Intergenic 115725 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr22-2629 chr22 33067330 33067540 + 8.37 0.000 Intergenic Intergenic -9054 NM_001369907 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr2-13233 chr2 124556013 124556223 + 8.37 0.000 intron (NM_130773, intron 10 of 23) intron (NM_130773, intron 10 of 23) 530831 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr5-7558 chr5 39355407 39355617 + 8.37 0.000 intron (NM_001737, intron 1 of 10) intron (NM_001737, intron 1 of 10) 8983 NM_001737 735 Hs.654443 NM_001737 ENSG00000113600 C9 ARMD15|C9D complement C9 protein-coding chr4-6425 chr4 131708194 131708404 + 8.37 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -56539 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr1-9683 chr1 51070684 51070894 + 8.37 0.000 Intergenic Intergenic 10771 NR_106754 102466656 NR_106754 ENSG00000275816 MIR6500 hsa-mir-6500 microRNA 6500 ncRNA chr1-9686 chr1 51321557 51321767 + 8.37 0.000 intron (NM_001080494, intron 2 of 17) intron (NM_001080494, intron 2 of 17) 606 NM_001080494 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr1-2380 chr1 113759236 113759446 + 8.37 0.000 promoter-TSS (NM_006608) promoter-TSS (NM_006608) 145 NM_001323053 10745 Hs.655824 NM_006608 ENSG00000116793 PHTF1 PHTF putative homeodomain transcription factor 1 protein-coding chr12-4340 chr12 890641 890851 + 8.37 0.000 intron (NM_001184985, intron 22 of 27) intron (NM_001184985, intron 22 of 27) 42330 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr17-5920 chr17 74826739 74826949 + 8.37 0.000 intron (NM_001321264, intron 9 of 9) intron (NM_001321264, intron 9 of 9) 33040 NR_103735 2905 Hs.436980 NM_000835 ENSG00000161509 GRIN2C GluN2C|NMDAR2C|NR2C glutamate ionotropic receptor NMDA type subunit 2C protein-coding chr12-6705 chr12 4756444 4756654 + 8.37 0.000 intron (NM_017417, intron 6 of 10) intron (NM_017417, intron 6 of 10) 36149 NM_017417 26290 Hs.511985 NM_017417 ENSG00000130035 GALNT8 GALNAC-T8 polypeptide N-acetylgalactosaminyltransferase 8 protein-coding chr10-6550 chr10 72487547 72487757 + 8.37 0.000 intron (NM_001195519, intron 1 of 6) HSMAR2|DNA|TcMar-Mariner 36334 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr17-7956 chr17 47686891 47687101 + 8.37 0.000 Intergenic L2a|LINE|L2 -8268 NM_014726 9755 Hs.94790 NM_014726 ENSG00000198933 TBKBP1 ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding chrX-2241 chrX 46044528 46044738 + 8.37 0.000 Intergenic Intergenic -193143 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr6-2220 chr6 43669699 43669909 + 8.37 0.000 intron (NM_001193341, intron 5 of 5) intron (NM_001193341, intron 5 of 5) 18008 NM_001193343 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr3-6118 chr3 53864458 53864668 + 8.37 0.000 intron (NM_018725, intron 10 of 10) intron (NM_018725, intron 10 of 10) 17589 NM_022899 93973 Hs.412186 NM_022899 ENSG00000113812 ACTR8 ARP8|INO80N|hArp8 actin related protein 8 protein-coding chr15-1792 chr15 80967540 80967750 + 8.37 0.000 intron (NR_126328, intron 1 of 2) intron (NR_126328, intron 1 of 2) 22174 NR_126327 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr6-3360 chr6 35668239 35668449 + 8.37 0.000 intron (NM_001145775, intron 2 of 11) MLT1K|LTR|ERVL-MaLR -3555 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr20-713 chr20 50762448 50762658 + 8.37 0.000 Intergenic AluJo|SINE|Alu 30973 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr17-5707 chr17 55668546 55668756 + 8.37 0.000 Intergenic Intergenic 54213 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr2-7010 chr2 146877358 146877568 + 8.37 0.000 Intergenic Intergenic 290406 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr17-6712 chr17 80084589 80084799 + 8.37 0.000 intron (NM_017950, intron 12 of 19) intron (NM_017950, intron 12 of 19) -14134 NR_039607 100616121 NR_039607 ENSG00000265561 MIR1268B - microRNA 1268b ncRNA chr17-2576 chr17 64840768 64840978 + 8.37 0.000 Intergenic AluSc|SINE|Alu -3689 NR_024386 440456 Hs.646585 NR_024386 PLEKHM1P1 PLEKHM1P pleckstrin homology and RUN domain containing M1 pseudogene 1 pseudo chr6-4146 chr6 169163034 169163244 + 8.37 0.000 promoter-TSS (NR_132622) promoter-TSS (NR_132622) -150 NR_132623 101929484 Hs.364166 NR_132622 ENSG00000223485 LINC01615 - long intergenic non-protein coding RNA 1615 ncRNA chr1-10533 chr1 170410494 170410704 + 8.37 0.000 Intergenic Intergenic -121523 NM_001146039 92344 Hs.183702 NM_152281 ENSG00000120370 GORAB GO|NTKLBP1|SCYL1BP1 golgin, RAB6 interacting protein-coding chr7-6202 chr7 130695034 130695244 + 8.37 0.000 Intergenic L2a|LINE|L2 -7707 NM_001304968 114960 Hs.592266 NM_052933 ENSG00000213265 TSGA13 - testis specific 13 protein-coding chr4-3212 chr4 37693537 37693747 + 8.37 0.000 Intergenic Intergenic -7266 NM_001085399 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr3-958 chr3 48734510 48734720 + 8.37 0.000 Intergenic SVA_D|Retroposon|SVA -17337 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr21-1165 chr21 42264422 42264632 + 8.37 0.000 intron (NM_207627, intron 3 of 15) intron (NM_207627, intron 3 of 15) 44629 NM_207174 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr16-3513 chr16 23603722 23603932 + 8.37 0.000 intron (NM_024675, intron 12 of 12) intron (NM_024675, intron 12 of 12) -7511 NM_005003 4706 Hs.189716 NM_005003 ENSG00000004779 NDUFAB1 ACP|ACP1|FASN2A|SDAP NADH:ubiquinone oxidoreductase subunit AB1 protein-coding chr19-3461 chr19 32943736 32943946 + 8.37 0.000 intron (NM_032816, intron 5 of 18) intron (NM_032816, intron 5 of 18) 28117 NM_032816 84902 Hs.599703 NM_032816 ENSG00000121289 CEP89 CCDC123|CEP123 centrosomal protein 89 protein-coding chr1-10997 chr1 217671321 217671531 + 8.37 0.000 intron (NM_138796, intron 4 of 10) MER92B|LTR|ERV1 40082 NM_138796 128153 Hs.171130 NM_138796 ENSG00000162814 SPATA17 IQCH|MSRG-11|MSRG11 spermatogenesis associated 17 protein-coding chr12-7499 chr12 67700133 67700343 + 8.37 0.000 Intergenic Intergenic 29237 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr1-11842 chr1 34834991 34835201 + 8.37 0.000 Intergenic AluJr|SINE|Alu 23949 NM_001164824 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding chrX-747 chrX 14592137 14592347 + 8.37 0.000 intron (NM_002063, intron 4 of 8) intron (NM_002063, intron 4 of 8) 62706 NM_001118886 2742 Hs.2700 NM_002063 ENSG00000101958 GLRA2 GLR glycine receptor alpha 2 protein-coding chr7-4220 chr7 152902231 152902441 + 8.37 0.000 Intergenic Intergenic 142584 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr3-3946 chr3 50281809 50282019 + 8.37 0.000 intron (NM_153215, intron 1 of 3) AluSx3|SINE|Alu 2827 NM_001304385 132228 Hs.315177 NM_153215 ENSG00000179564 LSMEM2 C3orf45 leucine rich single-pass membrane protein 2 protein-coding chr18-1934 chr18 35029975 35030185 + 8.37 0.000 intron (NM_001143827, intron 2 of 7) intron (NM_001143827, intron 2 of 7) -11333 NM_014268 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr14-3273 chr14 79673198 79673408 + 8.37 0.000 intron (NM_004796, intron 14 of 16) intron (NM_004796, intron 14 of 16) 393923 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr18-972 chr18 73962267 73962477 + 8.37 0.000 Intergenic Intergenic 185462 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chrX-3577 chrX 74232906 74233116 + 8.37 0.000 intron (NR_028379, intron 5 of 6) intron (NR_028379, intron 5 of 6) -14393 NR_030620 100126317 NR_030620 ENSG00000212027 MIR374B MIRN374B|mir-374b microRNA 374b ncRNA chr6-2498 chr6 117483343 117483553 + 8.37 0.000 intron (NM_173674, intron 1 of 14) CpG 774 NM_001366459 285761 Hs.658304 NM_173674 ENSG00000164465 DCBLD1 dJ94G16.1 discoidin, CUB and LCCL domain containing 1 protein-coding chr11-10444 chr11 117002661 117002871 + 8.37 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 95662 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr7-2285 chr7 38858376 38858586 + 8.37 0.000 intron (NM_014396, intron 4 of 28) MER4D1|LTR|ERV1 50710 NM_014396 27072 Hs.592184 NM_014396 ENSG00000006715 VPS41 HVPS41|HVSP41|hVps41p VPS41 subunit of HOPS complex protein-coding chr1-6190 chr1 204941739 204941949 + 8.37 0.000 intron (NM_001160332, intron 2 of 27) intron (NM_001160332, intron 2 of 27) -2382 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr14-1524 chr14 56011452 56011662 + 8.37 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -106854 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr12-7742 chr12 93767299 93767509 + 8.37 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -29581 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr12-1718 chr12 19030285 19030495 + 8.37 0.000 Intergenic LTR82A|LTR|ERVL -99343 NM_001143821 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr19-3196 chr19 47694701 47694911 + 8.37 0.000 intron (NM_015711, intron 8 of 14) intron (NM_015711, intron 8 of 14) -18616 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr7-5600 chr7 50313451 50313661 + 8.37 0.000 intron (NM_001291847, intron 1 of 4) intron (NM_001291847, intron 1 of 4) 4856 NM_001291837 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr6-7160 chr6 37038210 37038420 + 8.37 0.000 Intergenic Intergenic 32660 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr22-4195 chr22 45959797 45960007 + 8.37 0.000 intron (NM_058238, intron 1 of 3) intron (NM_058238, intron 1 of 3) 17260 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr2-4609 chr2 130796150 130796360 + 8.37 0.000 Intergenic Intergenic 39911 NM_001105195 205147 Hs.369289 NM_152698 ENSG00000178171 AMER3 FAM123C APC membrane recruitment protein 3 protein-coding chr1-5393 chr1 5960900 5961110 + 8.37 0.000 intron (NR_111987, intron 6 of 32) L1MB4|LINE|L1 31420 NM_001291593 261734 Hs.462348 NM_015102 ENSG00000131697 NPHP4 POC10|SLSN4 nephrocystin 4 protein-coding chr2-3383 chr2 20422236 20422446 + 8.37 0.000 Intergenic Intergenic -24733 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr4-4191 chr4 11342416 11342626 + 8.37 0.000 Intergenic Intergenic -26306 NR_030298 693157 NR_030298 ENSG00000207716 MIR572 MIRN572|hsa-mir-572 microRNA 572 ncRNA chr17-5257 chr17 18163310 18163520 + 8.37 0.000 intron (NM_016239, intron 58 of 64) intron (NM_016239, intron 58 of 64) -20413 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr9-6383 chr9 28694565 28694775 + 8.37 0.000 intron (NM_001354574, intron 2 of 5) MIR|SINE|MIR 24635 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr14-2120 chr14 74982068 74982278 + 8.37 0.000 Intergenic Intergenic -20748 NM_014239 8892 Hs.409137 NM_014239 ENSG00000119718 EIF2B2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B subunit beta protein-coding chr2-8226 chr2 96541508 96541718 + 8.37 0.000 intron (NM_001319092, intron 1 of 6) L1M5|LINE|L1 3734 NM_001319092 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr11-7704 chr11 69155288 69155498 + 8.37 0.000 promoter-TSS (NR_161183) promoter-TSS (NR_161183) -542 NM_001369201 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chrX-4805 chrX 100182458 100182668 + 8.37 0.000 Intergenic L1PB1|LINE|L1 227710 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-3533 chr8 119668679 119668889 + 8.37 0.000 intron (NM_001330600, intron 1 of 25) intron (NM_001330600, intron 1 of 25) 4606 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr6-4316 chr6 15939799 15940009 + 8.37 0.000 Intergenic Intergenic -189182 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr11-9387 chr11 55870823 55871033 + 8.37 0.000 Intergenic Intergenic -12369 NM_032681 84767 Hs.326734 NM_032681 ENSG00000124900 TRIM51 SPRYD5|TRIM51A tripartite motif-containing 51 protein-coding chr8-2393 chr8 54907427 54907637 + 8.37 0.000 Intergenic AluSq|SINE|Alu -194496 NM_052898 114786 Hs.130197 NM_052898 ENSG00000206579 XKR4 XRG4 XK related 4 protein-coding chr12-4061 chr12 52117006 52117216 + 8.37 0.000 Intergenic HERVE-int|LTR|ERV1 23542 NR_120440 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo KI270442.1-17 KI270442.1 110062 110272 + 8.37 0.000 NA NA NA NA chr15-2759 chr15 26993721 26993931 + 8.37 0.000 intron (NM_001270873, intron 2 of 5) L1MA2|LINE|L1 22645 NM_033223 2567 Hs.569475 NM_033223 ENSG00000182256 GABRG3 - gamma-aminobutyric acid type A receptor gamma3 subunit protein-coding chr22-3930 chr22 36913512 36913722 + 8.37 0.000 promoter-TSS (NM_000395) promoter-TSS (NM_000395) -11 NM_000395 1439 Hs.592192 NM_000395 ENSG00000100368 CSF2RB CD131|CDw131|IL3RB|IL5RB|SMDP5|betaGMR colony stimulating factor 2 receptor beta common subunit protein-coding chr17-6026 chr17 78564991 78565201 + 8.37 0.000 intron (NM_173628, intron 11 of 80) MER31A|LTR|ERV1 12298 NM_173628 8632 Hs.375975 NM_003727 ENSG00000187775 DNAH17 DNAHL1|DNEL2 dynein axonemal heavy chain 17 protein-coding chr1-8931 chr1 7726411 7726621 + 8.37 0.000 intron (NM_001349624, intron 1 of 11) intron (NM_001349624, intron 1 of 11) 21780 NM_001349616 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr20-1743 chr20 47304572 47304782 + 8.37 0.000 intron (NM_001281774, intron 4 of 23) intron (NM_001281774, intron 4 of 23) -13825 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr16-5565 chr16 31386651 31386861 + 8.37 0.000 Intergenic MER66D|LTR|ERV1 -6579 NM_001318185 3681 Hs.679163 NM_005353 ENSG00000156886 ITGAD ADB2|CD11D integrin subunit alpha D protein-coding chr3-5718 chr3 15933899 15934109 + 8.37 0.000 Intergenic MER5A|DNA|hAT-Charlie 60233 NR_030289 693148 NR_030289 ENSG00000207815 MIR563 MIRN563|hsa-mir-563 microRNA 563 ncRNA chr2-5858 chr2 238302098 238302308 + 8.37 0.000 Intergenic Intergenic -13593 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr15-2014 chr15 47750605 47750815 + 8.37 0.000 intron (NM_153618, intron 1 of 18) intron (NM_153618, intron 1 of 18) 32221 NM_153619 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr2-5669 chr2 201166142 201166352 + 8.37 0.000 non-coding (NR_147250, exon 9 of 9) non-coding (NR_147250, exon 9 of 9) -8455 NR_040030 65072 Hs.664613 NR_040030 ENSG00000226312 CFLAR-AS1 ALS2CR10 CFLAR antisense RNA 1 ncRNA chr7-4174 chr7 116211050 116211260 + 8.37 0.000 intron (NM_015641, intron 1 of 6) intron (NM_015641, intron 1 of 6) 616 NM_015641 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr6-8324 chr6 145416192 145416402 + 8.37 0.000 Intergenic Intergenic 270580 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr2-13170 chr2 120218134 120218344 + 8.37 0.000 3' UTR (NM_024121, exon 1 of 1) 3' UTR (NM_024121, exon 1 of 1) 5161 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr5-3991 chr5 16157793 16158003 + 8.37 0.000 intron (NM_001102562, intron 2 of 3) L1MA4|LINE|L1 21893 NM_001102562 441061 Hs.662216 NM_001102562 ENSG00000183654 MARCH11 MARCH-XI|RNF226 membrane associated ring-CH-type finger 11 protein-coding chr6-6590 chr6 141956350 141956560 + 8.37 0.000 Intergenic LTR38-int|LTR|ERV1 132344 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr1-13786 chr1 18003200 18003410 + 8.37 0.000 Intergenic Intergenic -62352 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr6-3948 chr6 87789846 87790056 + 8.37 0.000 intron (NR_110869, intron 2 of 4) intron (NR_110869, intron 2 of 4) 5091 NR_110869 101928911 Hs.571178 NR_110869 LOC101928911 - uncharacterized LOC101928911 ncRNA chr14-4750 chr14 61973977 61974187 + 8.37 0.000 intron (NM_001367657, intron 3 of 6) intron (NM_001367657, intron 3 of 6) 46387 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr11-3933 chr11 130451431 130451641 + 8.37 0.000 intron (NM_139055, intron 1 of 7) intron (NM_139055, intron 1 of 7) 2562 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr2-8190 chr2 88346509 88346719 + 8.37 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 106079 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr6-6032 chr6 119786466 119786676 + 8.37 0.000 intron (NR_134600, intron 2 of 3) intron (NR_134600, intron 2 of 3) -228608 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr20-692 chr20 1876974 1877184 + 8.37 0.000 Intergenic Intergenic -17088 NM_001330728 140885 Hs.581021 NM_080792 ENSG00000198053 SIRPA BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP signal regulatory protein alpha protein-coding chr7-6540 chr7 45959345 45959555 + 8.37 0.000 Intergenic L1MEf|LINE|L1 -38178 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chrX-3887 chrX 6339299 6339509 + 8.37 0.000 Intergenic Intergenic 44559 NR_039927 100616373 NR_039927 ENSG00000265284 MIR4770 - microRNA 4770 ncRNA chr1-9848 chr1 64075395 64075605 + 8.37 0.000 intron (NM_005012, intron 4 of 8) MIRb|SINE|MIR 36705 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr11-2224 chr11 65699499 65699709 + 8.37 0.000 Intergenic AluSx|SINE|Alu -12648 NM_006388 10524 Hs.397010 NM_006388 ENSG00000172977 KAT5 ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 lysine acetyltransferase 5 protein-coding chr10-5389 chr10 74542105 74542315 + 8.37 0.000 intron (NM_001369123, intron 7 of 9) MLT1F2|LTR|ERVL-MaLR -12886 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr1-8051 chr1 246798945 246799155 + 8.37 0.000 Intergenic Intergenic 9433 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr16-4533 chr16 63721955 63722165 + 8.37 0.000 Intergenic L1PA8A|LINE|L1 1400003 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr7-9540 chr7 140233284 140233494 + 8.37 0.000 Intergenic Tigger20a|DNA|TcMar-Tigger 56128 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr1-7008 chr1 169367599 169367809 + 8.37 0.000 promoter-TSS (NM_013330) promoter-TSS (NM_013330) 93 NM_013330 29922 Hs.706952 NM_013330 ENSG00000143156 NME7 CFAP67|MN23H7|NDK 7|NDK7|nm23-H7 NME/NM23 family member 7 protein-coding chr2-8760 chr2 162724587 162724797 + 8.37 0.000 intron (NM_033272, intron 2 of 15) MER44A|DNA|TcMar-Tigger -44244 NR_110258 101929570 Hs.470445 NR_110258 ENSG00000237750 LOC101929570 - uncharacterized LOC101929570 ncRNA chrX-2070 chrX 19856139 19856349 + 8.37 0.000 intron (NM_031892, intron 1 of 17) intron (NM_031892, intron 1 of 17) -23093 NM_001353893 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr7-9326 chr7 128694627 128694837 + 8.37 0.000 Intergenic Intergenic -14329 NR_104243 84691 Hs.732440 NM_032599 ENSG00000135248 FAM71F1 FAM137A|NYD-SP18 family with sequence similarity 71 member F1 protein-coding chrX-2287 chrX 51361886 51362096 + 8.37 0.000 Intergenic L1PA8A|LINE|L1 29169 NM_001304963 170685 Hs.375178 NM_153183 ENSG00000122824 NUDT10 APS2|DIPP3-alpha|DIPP3a nudix hydrolase 10 protein-coding chr19-6751 chr19 39264068 39264278 + 8.37 0.000 Intergenic Intergenic -4344 NM_172138 282616 Hs.567792 NM_172138 ENSG00000183709 IFNL2 IL-28A|IL28A interferon lambda 2 protein-coding chr4-5491 chr4 77413578 77413788 + 8.37 0.000 Intergenic Intergenic -98070 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr6-5477 chr6 161379662 161379872 + 8.37 0.000 intron (NM_004562, intron 10 of 11) LTR16|LTR|ERVL -91210 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr3-3833 chr3 29427802 29428012 + 8.37 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 146595 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr5-3017 chr5 9363502 9363712 + 8.37 0.000 intron (NM_003966, intron 3 of 22) intron (NM_003966, intron 3 of 22) -147726 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr11-5550 chr11 96827180 96827390 + 8.37 0.000 Intergenic Intergenic 318860 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr20-3261 chr20 2937121 2937331 + 8.37 0.000 intron (NM_080841, intron 1 of 22) AluSc|SINE|Alu 14019 NM_080841 5786 Hs.269577 NM_002836 ENSG00000132670 PTPRA HEPTP|HLPR|HPTPA|HPTPalpha|LRP|PTPA|PTPRL2|R-PTP-alpha|RPTPA protein tyrosine phosphatase receptor type A protein-coding chrX-2761 chrX 130033029 130033239 + 8.37 0.000 intron (NM_021946, intron 7 of 11) AluSx3|SINE|Alu 27946 NM_021946 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr14-1871 chr14 77281794 77282004 + 8.37 0.000 intron (NM_013382, intron 15 of 20) intron (NM_013382, intron 15 of 20) -10587 NM_021257 58157 Hs.274363 NM_021257 ENSG00000165553 NGB - neuroglobin protein-coding chr9-5771 chr9 127730071 127730281 + 8.37 0.000 intron (NM_144965, intron 13 of 13) intron (NM_144965, intron 13 of 13) 5118 NM_001085347 27433 Hs.444106 NM_130459 ENSG00000160404 TOR2A TORP1 torsin family 2 member A protein-coding chr15-1189 chr15 40421916 40422126 + 8.37 0.000 TTS (NM_002225) TTS (NM_002225) 16224 NR_148925 3712 Hs.513646 NM_002225 ENSG00000128928 IVD ACAD2 isovaleryl-CoA dehydrogenase protein-coding chr5-6506 chr5 683592 683802 + 8.37 0.000 intron (NM_007030, intron 1 of 3) intron (NM_007030, intron 1 of 3) 9655 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr13-3289 chr13 46272768 46272978 + 8.37 0.000 intron (NM_001282460, intron 9 of 9) intron (NM_001282460, intron 9 of 9) 24971 NR_047493 100861554 Hs.90866 NR_047493 ENSG00000261097 LINC00563 - long intergenic non-protein coding RNA 563 ncRNA chr1-5361 chr1 239689677 239689887 + 8.37 0.000 intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) 29337 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr20-4110 chr20 41327070 41327280 + 8.37 0.000 Intergenic Intergenic -13646 NR_126051 64900 Hs.25897 NM_022896 ENSG00000132793 LPIN3 LIPN3L|SMP2 lipin 3 protein-coding chr9-2503 chr9 98962137 98962347 + 8.37 0.000 intron (NM_001855, intron 2 of 41) intron (NM_001855, intron 2 of 41) 18335 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr3-2494 chr3 156291828 156292038 + 8.37 0.000 exon (NM_001308222, exon 1 of 13) exon (NM_001308222, exon 1 of 13) 896 NM_001308222 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr22-1955 chr22 48973354 48973564 + 8.37 0.000 Intergenic Intergenic 106689 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr8-5656 chr8 111708376 111708586 + 8.37 0.000 Intergenic Intergenic 331842 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr12-5705 chr12 112192023 112192233 + 8.37 0.000 intron (NM_001109662, intron 59 of 75) intron (NM_001109662, intron 59 of 75) -28807 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr4-5518 chr4 95816498 95816708 + 8.37 0.000 Intergenic Intergenic -23490 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding chr19-5766 chr19 23898179 23898389 + 8.37 0.000 Intergenic BSR/Beta|Satellite|Satellite -16602 NM_001348687 730087 Hs.655305 NM_001190829 ENSG00000213967 ZNF726 ZNF92P3 zinc finger protein 726 protein-coding chr8-6364 chr8 53171213 53171423 + 8.37 0.000 Intergenic Intergenic 80319 NM_000912 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr15-1415 chr15 52462760 52462970 + 8.37 0.000 intron (NM_001142495, intron 1 of 39) intron (NM_001142495, intron 1 of 39) 66015 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr8-7469 chr8 142284611 142284821 + 8.37 0.000 intron (NM_001366901, intron 10 of 13) MIR3|SINE|MIR 86360 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr7-6170 chr7 128307033 128307243 + 8.37 0.000 3' UTR (NM_001166135, exon 15 of 15) 3' UTR (NM_001166135, exon 15 of 15) 36770 NM_018077 55131 Hs.274263 NM_018077 ENSG00000106344 RBM28 ANES RNA binding motif protein 28 protein-coding chr4-7507 chr4 74493522 74493732 + 8.37 0.000 Intergenic Intergenic 48491 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr21-921 chr21 33059398 33059608 + 8.37 0.000 intron (NR_104056, intron 2 of 4) MIRc|SINE|MIR 1674 NR_104056 101930746 Hs.580934 NR_104056 ENSG00000232539 LINC00945 - long intergenic non-protein coding RNA 945 ncRNA chr19-2649 chr19 7508008 7508218 + 8.37 0.000 intron (NM_198534, intron 8 of 8) intron (NM_198534, intron 8 of 8) -7990 NM_018083 140467 Hs.133475 NM_018083 ENSG00000198816 ZNF358 ZFEND zinc finger protein 358 protein-coding chr19-6926 chr19 46319546 46319756 + 8.37 0.000 intron (NM_152796, intron 7 of 11) intron (NM_152796, intron 7 of 11) 16032 NM_152794 64344 Hs.420830 NM_022462 ENSG00000124440 HIF3A HIF-3A|HIF3-alpha-1|IPAS|MOP7|PASD7|bHLHe17 hypoxia inducible factor 3 subunit alpha protein-coding chr10-3911 chr10 71561706 71561916 + 8.37 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -49891 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr1-16294 chr1 214808266 214808476 + 8.37 0.000 Intergenic Intergenic -197171 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr4-5501 chr4 81882362 81882572 + 8.37 0.000 Intergenic Intergenic -410560 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chrX-3479 chrX 36255689 36255899 + 8.37 0.000 intron (NM_001304548, intron 49 of 63) intron (NM_001304548, intron 49 of 63) 184498 NR_110412 101928627 Hs.590831 NR_110412 ENSG00000226484 LOC101928627 - uncharacterized LOC101928627 ncRNA chr2-9676 chr2 32321106 32321316 + 8.37 0.000 Intergenic AluSz|SINE|Alu -35817 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr3-9678 chr3 63777364 63777574 + 8.37 0.000 Intergenic Intergenic -41830 NM_001355236 132200 Hs.506386 NM_001355236 ENSG00000163632 C3orf49 - chromosome 3 open reading frame 49 protein-coding chr17-4250 chr17 50762800 50763010 + 8.37 0.000 intron (NM_001358683, intron 3 of 3) AluSc|SINE|Alu 4613 NM_001358683 55018 Hs.389460 NM_017928 ENSG00000167117 ANKRD40CL C17orf73|LINC00483 ANKRD40 C-terminal like protein-coding chr5-8202 chr5 107062953 107063163 + 8.37 0.000 Intergenic MER39|LTR|ERV1 -52044 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr9-3196 chr9 130628118 130628328 + 8.37 0.000 intron (NM_003934, intron 12 of 18) intron (NM_003934, intron 12 of 18) 1926 NR_106915 102465515 NR_106915 ENSG00000277713 MIR6856 hsa-mir-6856 microRNA 6856 ncRNA chr2-3681 chr2 192201859 192202069 + 8.37 0.000 Intergenic Intergenic -7031 NM_001305134 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr7-3776 chr7 83669186 83669396 + 8.37 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -20152 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr12-3986 chr12 20105543 20105753 + 8.37 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 22253 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr16-5068 chr16 73545886 73546096 + 8.37 0.000 Intergenic Intergenic 159186 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr3-7439 chr3 123781960 123782170 + 8.37 0.000 intron (NM_053025, intron 4 of 33) MIR3|SINE|MIR 92421 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr17-7449 chr17 13087328 13087538 + 8.37 0.000 Intergenic Intergenic -69369 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr9-6195 chr9 93664008 93664218 + 8.37 0.000 intron (NM_005392, intron 14 of 21) intron (NM_005392, intron 14 of 21) 69272 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr2-8916 chr2 182672704 182672914 + 8.37 0.000 Intergenic Intergenic -43448 NM_018981 54431 Hs.516632 NM_018981 ENSG00000077232 DNAJC10 ERdj5|JPDI|MTHr|PDIA19 DnaJ heat shock protein family (Hsp40) member C10 protein-coding chr8-2814 chr8 124803129 124803339 + 8.37 0.000 Intergenic Intergenic -18751 NR_039806 100616221 NR_039806 ENSG00000283609 MIR4662A - microRNA 4662a ncRNA chr9-4267 chr9 98575635 98575845 + 8.37 0.000 intron (NM_005458, intron 2 of 18) intron (NM_005458, intron 2 of 18) 133195 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr8-2302 chr8 133206970 133207180 + 8.37 0.000 intron (NM_001204870, intron 1 of 1) intron (NM_001204870, intron 1 of 1) 16036 NM_001204869 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr6-3849 chr6 42694766 42694976 + 8.37 0.000 Intergenic L1ME1|LINE|L1 27726 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr12-8202 chr12 123164650 123164860 + 8.37 0.000 intron (NR_103517, intron 18 of 23) AluSx1|SINE|Alu -54266 NM_001300801 57605 Hs.272759 NM_020845 ENSG00000090975 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein membrane associated 2 protein-coding chr13-3284 chr13 45193609 45193819 + 8.37 0.000 3' UTR (NM_198404, exon 2 of 2) 3' UTR (NM_198404, exon 2 of 2) 7331 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr2-9677 chr2 33736939 33737149 + 8.37 0.000 intron (NR_126403, intron 1 of 5) Tigger4|DNA|TcMar-Tigger -8827 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr7-6650 chr7 130998981 130999191 + 8.37 0.000 intron (NR_109855, intron 2 of 4) MIR|SINE|MIR 85622 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr11-8364 chr11 82750896 82751106 + 8.37 0.000 Intergenic Intergenic -17137 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr22-1963 chr22 50227790 50228000 + 8.37 0.000 intron (NM_020461, intron 5 of 24) intron (NM_020461, intron 5 of 24) 17128 NM_020461 85378 Hs.336431 NM_020461 ENSG00000128159 TUBGCP6 GCP-6|GCP6|MCCRP|MCCRP1|MCPHCR tubulin gamma complex associated protein 6 protein-coding chr15-1538 chr15 64527682 64527892 + 8.37 0.000 intron (NM_015042, intron 1 of 8) L2a|LINE|L2 28367 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr6-1827 chr6 150397563 150397773 + 8.37 0.000 intron (NR_134655, intron 5 of 5) intron (NR_134655, intron 5 of 5) 28656 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chrX-1947 chrX 5967435 5967645 + 8.37 0.000 intron (NM_001282145, intron 4 of 6) intron (NM_001282145, intron 4 of 6) -258818 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr17-5132 chr17 7745962 7746172 + 8.37 0.000 intron (NM_020877, intron 12 of 85) intron (NM_020877, intron 12 of 85) -8253 NR_002778 118432 Hs.658086 NR_002778 ENSG00000240480 RPL29P2 RPL29_10_1510 ribosomal protein L29 pseudogene 2 pseudo chr1-2769 chr1 115679112 115679322 + 8.37 0.000 intron (NM_001172411, intron 4 of 7) intron (NM_001172411, intron 4 of 7) 36588 NM_001172412 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr10-5825 chr10 110932519 110932729 + 8.37 0.000 intron (NR_136749, intron 1 of 7) L2c|LINE|L2 4631 NR_026715 644511 Hs.632083 NR_026715 ENSG00000234118 RPL13AP6 RPL13A_7_1096|bA348N5.5 ribosomal protein L13a pseudogene 6 pseudo chr1-15764 chr1 174317630 174317840 + 8.37 0.000 intron (NM_001366445, intron 11 of 13) L1MA1|LINE|L1 42635 NM_001366449 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr15-4646 chr15 63973878 63974088 + 8.37 0.000 intron (NM_014326, intron 3 of 11) intron (NM_014326, intron 3 of 11) 45709 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr6-4558 chr6 41970586 41970796 + 8.37 0.000 intron (NM_001136017, intron 1 of 4) intron (NM_001136017, intron 1 of 4) -28843 NM_001136125 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr3-4241 chr3 141276013 141276223 + 8.37 0.000 intron (NM_001282728, intron 3 of 6) Tigger3a|DNA|TcMar-Tigger 44293 NM_001037172 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr2-11341 chr2 202687044 202687254 + 8.37 0.000 intron (NM_173511, intron 1 of 7) L1ME1|LINE|L1 52180 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr15-1814 chr15 33135411 33135621 + 8.37 0.000 intron (NM_001277313, intron 4 of 20) intron (NM_001277313, intron 4 of 20) 59198 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr7-9455 chr7 134761093 134761303 + 8.37 0.000 Intergenic Intergenic -18436 NM_033157 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr2-4489 chr2 3319971 3320181 + 8.37 0.000 intron (NM_001330530, intron 3 of 9) intron (NM_001330530, intron 3 of 9) 57742 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr15-4516 chr15 53127805 53128015 + 8.37 0.000 intron (NR_147181, intron 2 of 2) intron (NR_147181, intron 2 of 2) 11545 NR_147181 105370822 Hs.527821 NR_147181 ENSG00000259237 LINC02490 - long intergenic non-protein coding RNA 2490 ncRNA chr3-5115 chr3 50287178 50287388 + 8.37 0.000 TTS (NM_006764) TTS (NM_006764) 5312 NM_006764 7866 Hs.315177 NM_006764 ENSG00000214706 IFRD2 IFNRP|SKMc15|SM15 interferon related developmental regulator 2 protein-coding chr3-4178 chr3 127145149 127145359 + 8.37 0.000 Intergenic Intergenic -47877 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr1-6371 chr1 8933403 8933613 + 8.37 0.000 Intergenic L1ME3A|LINE|L1 -12360 NM_001270502 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr2-3347 chr2 218323807 218324017 + 8.37 0.000 intron (NM_022572, intron 1 of 8) intron (NM_022572, intron 1 of 8) 733 NM_022572 25953 Hs.98475 NM_015488 ENSG00000127838 PNKD BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR-1S|MR1|PDC|PKND1|PNKD1|TAHCCP2 PNKD metallo-beta-lactamase domain containing protein-coding chr11-5589 chr11 110713360 110713570 + 8.37 0.000 promoter-TSS (NM_001258417) promoter-TSS (NM_001258417) -276 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr5-4167 chr5 102165768 102165978 + 8.37 0.000 Intergenic L1PA4|LINE|L1 130411 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr10-3048 chr10 127408825 127409035 + 8.37 0.000 intron (NM_001290223, intron 40 of 51) intron (NM_001290223, intron 40 of 51) -140419 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chrX-1096 chrX 9534696 9534906 + 8.37 0.000 intron (NM_001139466, intron 2 of 17) L1MB1|LINE|L1 69743 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr2-7686 chr2 30684184 30684394 + 8.37 0.000 Intergenic Intergenic 123157 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr10-5025 chr10 34105098 34105308 + 8.37 0.000 Intergenic Intergenic -332523 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr17-1359 chr17 62478476 62478686 + 8.37 0.000 promoter-TSS (NM_001284333) promoter-TSS (NM_001284333) -537 NM_001330418 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr3-5007 chr3 23750515 23750725 + 8.37 0.000 Intergenic AluJr|SINE|Alu -55335 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr2-4751 chr2 11478091 11478301 + 8.37 0.000 Intergenic Intergenic -12019 NM_001278275 1876 Hs.603093 NM_198256 ENSG00000169016 E2F6 E2F-6 E2F transcription factor 6 protein-coding chr22-1308 chr22 44745979 44746189 + 8.37 0.000 intron (NM_181334, intron 4 of 14) MIR3|SINE|MIR -6474 NM_001017526 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr11-9386 chr11 55787261 55787471 + 8.37 0.000 Intergenic Intergenic -8190 NM_001004735 219436 Hs.553622 NM_001004735 ENSG00000186113 OR5D14 OR11-141|OR11-150 olfactory receptor family 5 subfamily D member 14 protein-coding chr6-4095 chr6 147698913 147699123 + 8.37 0.000 Intergenic L2b|LINE|L2 190328 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr10-5370 chr10 73655837 73656047 + 8.37 0.000 promoter-TSS (NM_001114133) promoter-TSS (NM_001114133) 87 NM_001114133 79933 Hs.645273 NM_024875 ENSG00000166317 SYNPO2L - synaptopodin 2 like protein-coding chr12-7678 chr12 87600727 87600937 + 8.37 0.000 Intergenic Intergenic -167980 NR_149056 110806294 Hs.615803 NR_149056 LINC02258 - long intergenic non-protein coding RNA 2258 ncRNA chr3-8329 chr3 68488763 68488973 + 8.37 0.000 intron (NM_001252216, intron 3 of 4) MIR|SINE|MIR -11769 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr16-2436 chr16 81941266 81941476 + 8.37 0.000 intron (NM_002661, intron 30 of 32) MER5A|DNA|hAT-Charlie 70099 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr2-11206 chr2 159638052 159638262 + 8.37 0.000 Intergenic L1M1|LINE|L1 -21556 NM_001289975 29994 Hs.470369 NM_013450 ENSG00000123636 BAZ2B WALp4 bromodomain adjacent to zinc finger domain 2B protein-coding chr20-2621 chr20 41359797 41360007 + 8.37 0.000 TTS (NM_052846) TTS (NM_052846) 6916 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr3-5921 chr3 42505635 42505845 + 8.37 0.000 intron (NM_001251884, intron 1 of 11) MIR3|SINE|MIR 3097 NM_004624 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr5-5919 chr5 59325594 59325804 + 8.37 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 31271 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr20-1971 chr20 37405148 37405358 + 8.37 0.000 3' UTR (NM_005417, exon 14 of 14) 3' UTR (NM_005417, exon 14 of 14) 59125 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr3-10072 chr3 108292938 108293148 + 8.37 0.000 Intergenic MIRc|SINE|MIR -3447 NM_001282556 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr3-2522 chr3 27633002 27633212 + 8.37 0.000 Intergenic CpG 89216 NM_001278182 8320 Hs.591663 NM_005442 ENSG00000163508 EOMES TBR2 eomesodermin protein-coding chr10-6696 chr10 120413350 120413560 + 8.37 0.000 Intergenic Intergenic -43499 NM_001318167 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chrX-1335 chrX 134256621 134256831 + 8.37 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 19513 NM_001353453 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr17-7001 chr17 51346261 51346471 + 8.37 0.000 Intergenic MIRb|SINE|MIR 9651 NR_122104 440446 Hs.626751 NR_122104 ENSG00000267452 LINC02072 - long intergenic non-protein coding RNA 2072 ncRNA chr10-7135 chr10 100635988 100636198 + 8.37 0.000 Intergenic Intergenic -99303 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr11-3007 chr11 128694903 128695113 + 8.37 0.000 intron (NM_002017, intron 1 of 8) CpG 936 NM_002017 2313 Hs.504281 NM_002017 ENSG00000151702 FLI1 BDPLT21|EWSR2|SIC-1 Fli-1 proto-oncogene, ETS transcription factor protein-coding chr17-7780 chr17 39251949 39252159 + 8.37 0.000 TTS (NM_032875) TTS (NM_032875) -26109 NM_198993 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr17-3294 chr17 48869380 48869590 + 8.37 0.000 Intergenic Intergenic -23302 NM_005175 516 Hs.80986 NM_005175 ENSG00000159199 ATP5MC1 ATP5A|ATP5G|ATP5G1 ATP synthase membrane subunit c locus 1 protein-coding chrX-2966 chrX 17200002 17200212 + 8.37 0.000 Intergenic L2b|LINE|L2 -175093 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr6-4950 chr6 102009476 102009686 + 8.37 0.000 intron (NM_001166247, intron 13 of 16) intron (NM_001166247, intron 13 of 16) 610596 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr20-3173 chr20 44067274 44067484 + 8.37 0.000 intron (NM_001098797, intron 8 of 8) LTR16A1|LTR|ERVL 119809 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr13-2760 chr13 98706695 98706905 + 8.37 0.000 intron (NM_005073, intron 15 of 22) THE1B|LTR|ERVL-MaLR 45872 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr1-15745 chr1 171833140 171833350 + 8.37 0.000 Intergenic Intergenic -8253 NM_001350206 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chr17-6152 chr17 81877780 81877990 + 8.37 0.000 Intergenic Intergenic -6548 NM_001301242 396 Hs.159161 NM_004309 ENSG00000141522 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor alpha protein-coding chr12-5711 chr12 113618321 113618531 + 8.37 0.000 Intergenic AluJb|SINE|Alu 146423 NR_126425 104355219 Hs.641707 NR_126425 LHX5-AS1 locus 4010|locus4010 LHX5 antisense RNA 1 ncRNA chr6-7474 chr6 57470232 57470442 + 8.37 0.000 intron (NM_000947, intron 7 of 13) intron (NM_000947, intron 7 of 13) 80205 NR_036097 100422884 NR_036097 ENSG00000212017 MIR548U - microRNA 548u ncRNA chr1-14183 chr1 33391341 33391551 + 8.37 0.000 Intergenic Intergenic -15853 NM_198040 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr3-3011 chr3 105747013 105747223 + 8.37 0.000 intron (NM_001321816, intron 4 of 15) intron (NM_001321816, intron 4 of 15) 120473 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr10-9228 chr10 132806490 132806700 + 8.37 0.000 Intergenic L1MD2|LINE|L1 -20448 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr18-2459 chr18 37332308 37332518 + 8.37 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 57953 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr16-6957 chr16 86023533 86023743 + 8.37 0.000 Intergenic MER113|DNA|hAT-Charlie 105291 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr12-6544 chr12 115871868 115872078 + 8.37 0.000 Intergenic Intergenic 276681 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr17-1748 chr17 3723491 3723701 + 8.37 0.000 promoter-TSS (NM_031965) promoter-TSS (NM_031965) -307 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chrY-2 chrY 1367432 1367642 + 8.37 0.000 intron (NM_002183, intron 9 of 11).2 CpG 24576 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chr22-1618 chr22 29154644 29154854 + 8.37 0.000 intron (NM_032045, intron 9 of 9) FLAM_A|SINE|Alu -51147 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr15-3299 chr15 78172285 78172495 + 8.37 0.000 TTS (NM_005530) TTS (NM_005530) 23028 NM_005530 3419 Hs.591110 NM_005530 ENSG00000166411 IDH3A - isocitrate dehydrogenase (NAD(+)) 3 alpha protein-coding chr1-4628 chr1 165827796 165828006 + 8.37 0.000 exon (NM_012474, exon 1 of 7) exon (NM_012474, exon 1 of 7) 287 NM_001363568 7371 Hs.458360 NM_012474 ENSG00000143179 UCK2 TSA903|UK|UMPK uridine-cytidine kinase 2 protein-coding chr6-2866 chr6 4672705 4672915 + 8.37 0.000 Intergenic Intergenic -33328 NM_001368125 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr7-3008 chr7 46486844 46487054 + 8.37 0.000 Intergenic Intergenic 210173 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr14-4340 chr14 23060688 23060898 + 8.37 0.000 intron (NM_001164816, intron 11 of 11) AluSq2|SINE|Alu -3255 NM_144985 64403 Hs.155912 NM_022478 ENSG00000139880 CDH24 CDH11L cadherin 24 protein-coding chr4-3666 chr4 29408204 29408414 + 8.37 0.000 Intergenic MSTB|LTR|ERVL-MaLR 194017 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chrX-2726 chrX 124174250 124174460 + 8.37 0.000 Intergenic Intergenic -158305 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr4-8205 chr4 134772469 134772679 + 8.37 0.000 Intergenic MSTA|LTR|ERVL-MaLR 348706 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr8-4130 chr8 74148450 74148660 + 8.37 0.000 Intergenic Intergenic 157163 NM_015364 23643 Hs.726603 NM_015364 ENSG00000154589 LY96 ESOP-1|MD-2|MD2|ly-96 lymphocyte antigen 96 protein-coding chr12-7808 chr12 98860449 98860659 + 8.37 0.000 intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) 34220 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr12-7587 chr12 76952536 76952746 + 8.37 0.000 Intergenic Intergenic -73622 NM_001321 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr1-10689 chr1 187826400 187826610 + 8.37 0.000 Intergenic L1PBa|LINE|L1 382877 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr12-5354 chr12 117603698 117603908 + 8.37 0.000 intron (NM_173598, intron 5 of 19) MER72|LTR|ERV1 -242001 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr15-4861 chr15 75214811 75215021 + 8.37 0.000 Intergenic Intergenic 13034 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr17-8405 chr17 75670174 75670384 + 8.37 0.000 intron (NM_001301839, intron 2 of 9) AluSc8|SINE|Alu 2941 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr4-4087 chr4 4393937 4394147 + 8.37 0.000 intron (NM_014392, intron 3 of 4) MIR|SINE|MIR 7079 NM_014392 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr17-4695 chr17 28860570 28860780 + 8.37 0.000 promoter-TSS (NR_039876) promoter-TSS (NR_039876) -696 NR_039876 100616273 NR_039876 ENSG00000283364 MIR451B - microRNA 451b ncRNA chr7-4028 chr7 152840289 152840499 + 8.37 0.000 intron (NM_001350946, intron 8 of 8) intron (NM_001350946, intron 8 of 8) 80642 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr1-14370 chr1 43338433 43338643 + 8.37 0.000 intron (NM_005373, intron 2 of 11) intron (NM_005373, intron 2 of 11) 734 NM_005373 4352 Hs.82906 NM_005373 ENSG00000117400 MPL C-MPL|CD110|MPLV|THCYT2|THPOR|TPOR MPL proto-oncogene, thrombopoietin receptor protein-coding chr2-12913 chr2 100433858 100434068 + 8.37 0.000 Intergenic Intergenic -16295 NM_004854 9486 Hs.516370 NM_004854 ENSG00000115526 CHST10 HNK-1ST|HNK1ST carbohydrate sulfotransferase 10 protein-coding chr17-7571 chr17 20085495 20085705 + 8.37 0.000 intron (NM_001243439, intron 1 of 14) intron (NM_001243439, intron 1 of 14) -1422 NM_001033553 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr4-5414 chr4 7477189 7477399 + 8.37 0.000 intron (NM_020777, intron 2 of 26) intron (NM_020777, intron 2 of 26) 17266 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr22-2654 chr22 36012096 36012306 + 8.37 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) 16336 NM_001082579 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr10-2034 chr10 78407211 78407421 + 8.37 0.000 Intergenic Intergenic 139974 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr9-2007 chr9 133783450 133783660 + 8.37 0.000 exon (NM_003371, exon 17 of 27) exon (NM_003371, exon 17 of 27) -43600 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr16-5033 chr16 56674030 56674240 + 8.37 0.000 Intergenic AluSx|SINE|Alu -1981 NR_003669 644314 Hs.434199 NM_175621 MT1IP MT1|MT1I|MTE metallothionein 1I, pseudogene pseudo chr6-7607 chr6 76584007 76584217 + 8.37 0.000 intron (NR_149101, intron 2 of 2) intron (NR_149101, intron 2 of 2) 9511 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr16-3840 chr16 64654122 64654332 + 8.37 0.000 Intergenic L1PA15|LINE|L1 467836 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr5-8139 chr5 99763241 99763451 + 8.37 0.000 Intergenic L1PA7|LINE|L1 229356 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr17-6811 chr17 8792083 8792293 + 8.37 0.000 Intergenic MER77B|LTR|ERVL 7177 NM_152599 162387 Hs.213603 NM_152599 ENSG00000185156 MFSD6L - major facilitator superfamily domain containing 6 like protein-coding chr17-5692 chr17 51289797 51290007 + 8.37 0.000 intron (NM_016001, intron 11 of 13) intron (NM_016001, intron 11 of 13) 29356 NM_016001 51096 Hs.709327 NM_016001 ENSG00000011260 UTP18 CGI-48|WDR50 UTP18 small subunit processome component protein-coding chr21-1682 chr21 28177256 28177466 + 8.37 0.000 intron (NR_126012, intron 3 of 5) intron (NR_126012, intron 3 of 5) 51306 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr18-2720 chr18 68890121 68890331 + 8.37 0.000 intron (NM_001093729, intron 7 of 9) AluJb|SINE|Alu 92146 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr12-4848 chr12 58172206 58172416 + 8.37 0.000 Intergenic Intergenic 84419 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chr8-3639 chr8 3905557 3905767 + 8.37 0.000 intron (NM_033225, intron 5 of 69) MER5A|DNA|hAT-Charlie 1089252 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr2-14305 chr2 217082204 217082414 + 8.37 0.000 Intergenic Intergenic -200424 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr17-3896 chr17 50629224 50629434 + 8.37 0.000 Intergenic Intergenic -5552 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr16-2946 chr16 4239359 4239569 + 8.37 0.000 intron (NM_001323667, intron 1 of 6) intron (NM_001323667, intron 1 of 6) 2616 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr5-2265 chr5 32275233 32275443 + 8.37 0.000 intron (NM_001294344, intron 2 of 13) intron (NM_001294344, intron 2 of 13) 37601 NM_001294343 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr9-4294 chr9 118226797 118227007 + 8.37 0.000 Intergenic LTR16|LTR|ERVL -452769 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr3-8687 chr3 184228885 184229095 + 8.37 0.000 Intergenic Intergenic -1363 NM_138345 90113 Hs.584997 NM_138345 ENSG00000145198 VWA5B2 - von Willebrand factor A domain containing 5B2 protein-coding chrX-4623 chrX 76828363 76828573 + 8.37 0.000 intron (NR_110405, intron 1 of 2) L1MB5|LINE|L1 90892 NR_029909 494333 NR_029909 ENSG00000283242 MIR384 MIRN384|hsa-mir-384 microRNA 384 ncRNA chr6-3933 chr6 83130735 83130945 + 8.37 0.000 intron (NM_015018, intron 17 of 38) AluSx|SINE|Alu 62425 NM_001199918 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr2-8373 chr2 111227297 111227507 + 8.37 0.000 intron (NR_015395, intron 5 of 6) intron (NR_015395, intron 5 of 6) 93684 NR_039636 100616341 NR_039636 ENSG00000266139 MIR4435-2 mir-4435-2 microRNA 4435-2 ncRNA chr8-5190 chr8 103982787 103982997 + 8.37 0.000 intron (NR_145711, intron 13 of 21) L1MA2|LINE|L1 163672 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr17-3857 chr17 46906773 46906983 + 8.37 0.000 Intergenic L2b|LINE|L2 -16239 NM_001353115 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr12-4374 chr12 4600394 4600604 + 8.37 0.000 intron (NM_001371301, intron 10 of 14) L2c|LINE|L2 -4364 NM_001282285 8798 Hs.439530 NM_003845 ENSG00000010219 DYRK4 - dual specificity tyrosine phosphorylation regulated kinase 4 protein-coding chr18-1109 chr18 70046389 70046599 + 8.37 0.000 intron (NM_001318520, intron 39 of 47) intron (NM_001318520, intron 39 of 47) -89695 NM_006566 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr11-10030 chr11 82379407 82379617 + 8.37 0.000 intron (NR_120571, intron 1 of 7) L1MA2|LINE|L1 24401 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr11-3748 chr11 36408992 36409202 + 8.37 0.000 intron (NM_001160167, intron 3 of 8) intron (NM_001160167, intron 3 of 8) 8100 NM_001160169 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr19-2676 chr19 13140046 13140256 + 8.37 0.000 3' UTR (NM_052876, exon 6 of 6) 3' UTR (NM_052876, exon 6 of 6) 10224 NM_001271610 8677 Hs.43812 NM_003765 ENSG00000104915 STX10 SYN10|hsyn10 syntaxin 10 protein-coding chr1-15340 chr1 119969365 119969575 + 8.37 0.000 intron (NM_001200001, intron 6 of 21) intron (NM_001200001, intron 6 of 21) -72955 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr1-3285 chr1 234980951 234981161 + 8.37 0.000 Intergenic Intergenic -17057 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr4-4958 chr4 129138413 129138623 + 8.37 0.000 Intergenic Intergenic 42366 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr2-6763 chr2 43714231 43714441 + 8.37 0.000 intron (NM_172069, intron 15 of 29) intron (NM_172069, intron 15 of 29) -37907 NM_001101330 728819 NM_001101330 ENSG00000223658 C1GALT1C1L - C1GALT1 specific chaperone 1 like protein-coding chr14-2944 chr14 47467453 47467663 + 8.37 0.000 intron (NM_001113498, intron 1 of 16) intron (NM_001113498, intron 1 of 16) -124312 NM_182830 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr11-7025 chr11 118188992 118189202 + 8.37 0.000 Intergenic L1PB1|LINE|L1 -12458 NM_004588 6327 Hs.129783 NM_004588 ENSG00000149575 SCN2B ATFB14 sodium voltage-gated channel beta subunit 2 protein-coding chr8-1950 chr8 55939567 55939777 + 8.37 0.000 intron (NM_002350, intron 1 of 12) intron (NM_002350, intron 1 of 12) -36817 NR_145767 109617001 NR_145767 ENSG00000199405 SNORA1B - small nucleolar RNA, H/ACA box 1B snoRNA chr7-8307 chr7 40695545 40695755 + 8.37 0.000 intron (NM_024728, intron 13 of 14) intron (NM_024728, intron 13 of 14) 284289 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr9-3337 chr9 98701682 98701892 + 8.37 0.000 intron (NM_005458, intron 1 of 18) intron (NM_005458, intron 1 of 18) 7148 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr19-2496 chr19 6103321 6103531 + 8.37 0.000 intron (NM_000635, intron 1 of 17) intron (NM_000635, intron 1 of 17) 7074 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr17-7080 chr17 66491960 66492170 + 8.37 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -75211 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr6-5039 chr6 111865130 111865340 + 8.37 0.000 intron (NM_153047, intron 1 of 13) intron (NM_153047, intron 1 of 13) 7836 NM_153047 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr20-1268 chr20 44721294 44721504 + 8.37 0.000 intron (NM_001323369, intron 2 of 2) AluJo|SINE|Alu 6555 NM_003881 8839 Hs.592145 NM_003881 ENSG00000064205 CCN5 CT58|CTGF-L|WISP2 cellular communication network factor 5 protein-coding chr3-4629 chr3 16211179 16211389 + 8.37 0.000 intron (NM_001319051, intron 5 of 9) intron (NM_001319051, intron 5 of 9) -5492 NM_001319052 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr1-8080 chr1 3077335 3077545 + 8.37 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 8237 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr12-3647 chr12 104565736 104565946 + 8.37 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -25792 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr17-5914 chr17 74651134 74651344 + 8.37 0.000 Intergenic Intergenic -19892 NM_175738 326624 Hs.351413 NM_175738 ENSG00000172794 RAB37 - RAB37, member RAS oncogene family protein-coding chr7-5934 chr7 99758022 99758232 + 8.37 0.000 3' UTR (NM_001202855, exon 13 of 13) 3' UTR (NM_001202855, exon 13 of 13) -22931 NM_001256497 100861540 NM_001256497 ENSG00000282301 CYP3A7-CYP3A51P CYP3A7|CYP3A7-3AP1|CYP3A7-CYP3AP1|CYP3A7.1L|CYPIIIA7 CYP3A7-CYP3A51P readthrough protein-coding chr8-2976 chr8 81272944 81273154 + 8.37 0.000 Intergenic Intergenic -7487 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding chr5-2999 chr5 3483959 3484169 + 8.37 0.000 intron (NR_033898, intron 2 of 4) (AC)n|Simple_repeat|Simple_repeat 19940 NR_104618 102467075 Hs.652949 NR_104618 ENSG00000250716 LINC01017 - long intergenic non-protein coding RNA 1017 ncRNA chr3-4389 chr3 194325699 194325909 + 8.37 0.000 Intergenic Intergenic -13000 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr10-4604 chr10 114600486 114600696 + 8.37 0.000 intron (NM_001352440, intron 2 of 20) intron (NM_001352440, intron 2 of 20) 13145 NM_001352442 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr4-3106 chr4 156298229 156298439 + 8.37 0.000 Intergenic Intergenic -344468 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr12-4376 chr12 4825948 4826158 + 8.37 0.000 intron (NM_002235, intron 1 of 1) intron (NM_002235, intron 1 of 1) 16877 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding chr9-7118 chr9 130953977 130954187 + 8.37 0.000 Intergenic AluSz|SINE|Alu -14835 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr15-4789 chr15 71561961 71562171 + 8.37 0.000 intron (NM_001286429, intron 1 of 11) MIR3|SINE|MIR 14830 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr12-4158 chr12 84564623 84564833 + 8.37 0.000 Intergenic Intergenic 348071 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr7-7700 chr7 157043879 157044089 + 8.37 0.000 Intergenic Intergenic 33127 NR_038835 645249 Hs.224879 NR_038835 ENSG00000243479 MNX1-AS1 CCAT5 MNX1 antisense RNA 1 (head to head) ncRNA chr22-1568 chr22 43148042 43148252 + 8.37 0.000 Intergenic HAL1|LINE|L1 -3412 NR_046308 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr17-8512 chr17 79120001 79120211 + 8.37 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 45169 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr3-3490 chr3 5122769 5122979 + 8.37 0.000 intron (NM_018184, intron 1 of 6) intron (NM_018184, intron 1 of 6) 582 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr1-8908 chr1 6416706 6416916 + 8.37 0.000 3' UTR (NM_019089, exon 4 of 4) 3' UTR (NM_019089, exon 4 of 4) 3108 NM_019089 54626 Hs.118727 NM_019089 ENSG00000069812 HES2 bHLHb40 hes family bHLH transcription factor 2 protein-coding chr7-8419 chr7 46174396 46174606 + 8.37 0.000 Intergenic Intergenic -253229 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr13-3862 chr13 51040875 51041085 + 8.37 0.000 intron (NR_003923, intron 3 of 16) intron (NR_003923, intron 3 of 16) 25177 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr12-5667 chr12 91833611 91833821 + 8.37 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 307997 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr9-2057 chr9 25678312 25678522 + 8.37 0.000 5' UTR (NM_001004125, exon 1 of 1) 5' UTR (NM_001004125, exon 1 of 1) 441 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr12-2452 chr12 53809799 53810009 + 8.37 0.000 Intergenic Intergenic -52870 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr11-9246 chr11 42422286 42422496 + 8.37 0.000 Intergenic Intergenic -168701 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr22-1762 chr22 26411830 26412040 + 8.37 0.000 Intergenic L2c|LINE|L2 -17325 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr22-3603 chr22 20218053 20218263 + 8.37 0.000 Intergenic Intergenic 11826 NR_026919 150197 Hs.635544 NM_152508 ENSG00000236499 LINC00896 - long intergenic non-protein coding RNA 896 ncRNA chr9-4671 chr9 122125303 122125513 + 8.37 0.000 Intergenic Intergenic -5241 NR_039690 100616312 NR_039690 ENSG00000266583 MIR4478 mir-4478 microRNA 4478 ncRNA chr1-10117 chr1 100499416 100499626 + 8.37 0.000 TTS (NM_033312) TTS (NM_033312) -38618 NM_022049 54112 Hs.170053 NM_022049 ENSG00000181656 GPR88 COCPMR|STRG G protein-coupled receptor 88 protein-coding chr3-7793 chr3 87308232 87308442 + 8.37 0.000 Intergenic L2a|LINE|L2 -31753 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr6-2701 chr6 39682141 39682351 + 8.37 0.000 intron (NM_001289020, intron 3 of 21) Tigger3a|DNA|TcMar-Tigger 43162 NM_001289020 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr4-6141 chr4 28557838 28558048 + 8.37 0.000 Intergenic Intergenic -261639 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr10-7848 chr10 46037243 46037453 + 8.37 0.000 intron (NM_138634, intron 2 of 2) intron (NM_138634, intron 2 of 2) -6634 NM_001145261 8031 Hs.643658 NM_005437 ENSG00000266412 NCOA4 ARA70|ELE1|PTC3|RFG nuclear receptor coactivator 4 protein-coding chr6-5649 chr6 77317342 77317552 + 8.37 0.000 Intergenic L1MC|LINE|L1 146575 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr10-8279 chr10 76671537 76671747 + 8.37 0.000 Intergenic Intergenic -216402 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr1-6140 chr1 168080301 168080511 + 8.37 0.000 3' UTR (NM_001349634, exon 8 of 8) 3' UTR (NM_001349634, exon 8 of 8) 56030 NM_001267612 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr18-1160 chr18 12301958 12302168 + 8.37 0.000 Intergenic L1MCc|LINE|L1 -5606 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr15-4955 chr15 78762043 78762253 + 8.37 0.000 intron (NM_014272, intron 23 of 23) intron (NM_014272, intron 23 of 23) 10111 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr7-7384 chr7 67707403 67707613 + 8.37 0.000 Intergenic L2b|LINE|L2 -312745 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr6-3144 chr6 110255468 110255678 + 8.37 0.000 intron (NM_001123364, intron 4 of 4) intron (NM_001123364, intron 4 of 4) 74485 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr7-7087 chr7 156427504 156427714 + 8.37 0.000 Intergenic Intergenic 17979 NR_038232 285889 Hs.407095 NR_038232 ENSG00000182648 LOC285889 - uncharacterized LOC285889 ncRNA chr17-3679 chr17 13086490 13086700 + 8.37 0.000 Intergenic Intergenic -68531 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr12-8298 chr12 127479203 127479413 + 8.37 0.000 Intergenic Intergenic -139236 NR_110057 101927616 Hs.637827 NR_110057 ENSG00000256362 LINC02375 - long intergenic non-protein coding RNA 2375 ncRNA chr20-3766 chr20 20209878 20210088 + 8.37 0.000 intron (NM_015585, intron 17 of 26) intron (NM_015585, intron 17 of 26) 153337 NM_001167816 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr4-3342 chr4 2823230 2823440 + 8.37 0.000 intron (NM_001145856, intron 3 of 12) intron (NM_001145856, intron 3 of 12) 4521 NM_003023 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr12-5581 chr12 27246722 27246932 + 8.37 0.000 intron (NM_015000, intron 1 of 13) intron (NM_015000, intron 1 of 13) 2541 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr10-2063 chr10 97778460 97778670 + 8.37 0.000 Intergenic Intergenic -6566 NM_003015 6425 Hs.279565 NM_003015 ENSG00000120057 SFRP5 SARP3 secreted frizzled related protein 5 protein-coding chr6-6732 chr6 2007725 2007935 + 8.37 0.000 intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 168161 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr17-8375 chr17 74775683 74775893 + 8.37 0.000 promoter-TSS (NM_001321264) promoter-TSS (NM_001321264) 557 NM_001305087 26151 Hs.144058 NM_015654 ENSG00000109065 NAT9 EBSP, hNATL N-acetyltransferase 9 (putative) protein-coding chr11-6274 chr11 59042610 59042820 + 8.37 0.000 intron (NR_033853, intron 3 of 5) intron (NR_033853, intron 3 of 5) 15737 NR_033853 283194 NR_033853 ENSG00000255240 LOC283194 - uncharacterized LOC283194 ncRNA chr10-7225 chr10 119514944 119515154 + 8.37 0.000 intron (NM_001005339, intron 4 of 4) Tigger15a|DNA|TcMar-Tigger 21484 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr3-10349 chr3 127788394 127788604 + 8.37 0.000 intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 34383 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr3-11155 chr3 189360964 189361174 + 8.37 0.000 Intergenic AluSq2|SINE|Alu -120475 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr19-2268 chr19 58320180 58320390 + 8.37 0.000 intron (NR_144444, intron 2 of 2) intron (NR_144444, intron 2 of 2) -6709 NM_001321117 342945 Hs.388162 NM_181846 ENSG00000182318 ZSCAN22 HKR2|ZNF50 zinc finger and SCAN domain containing 22 protein-coding chr4-5546 chr4 127609747 127609957 + 8.37 0.000 Intergenic LTR40a|LTR|ERVL -23105 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr7-7650 chr7 144826259 144826469 + 8.37 0.000 intron (NM_001350887, intron 1 of 6) intron (NM_001350887, intron 1 of 6) 9576 NR_146935 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr7-5998 chr7 103593782 103593992 + 8.37 0.000 intron (NM_005045, intron 26 of 64) intron (NM_005045, intron 26 of 64) -147680 NM_198999 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr11-5233 chr11 20264107 20264317 + 8.37 0.000 Intergenic LTR50|LTR|ERVL -99473 NM_006410 10553 Hs.90753 NM_006410 ENSG00000109854 HTATIP2 CC3|SDR44U1|TIP30 HIV-1 Tat interactive protein 2 protein-coding chr1-7815 chr1 56786053 56786263 + 8.37 0.000 intron (NM_001004303, intron 4 of 19) MLT1H|LTR|ERVL-MaLR 33246 NM_001004303 199920 Hs.437655 NM_001004303 ENSG00000187889 FYB2 ARAP|C1orf168 FYN binding protein 2 protein-coding chr16-4802 chr16 86000003 86000213 + 8.37 0.000 Intergenic Intergenic 81761 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr17-4783 chr17 46965373 46965583 + 8.37 0.000 intron (NR_148349, intron 7 of 7) intron (NR_148349, intron 7 of 7) -7539 NR_049812 100847067 NR_049812 ENSG00000264999 MIR5089 - microRNA 5089 ncRNA chr5-4574 chr5 23829271 23829481 + 8.37 0.000 Intergenic THE1B|LTR|ERVL-MaLR -121972 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA chr9-8428 chr9 121442437 121442647 + 8.37 0.000 Intergenic L2a|LINE|L2 57485 NR_045211 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr7-4708 chr7 47222307 47222517 + 8.37 0.000 Intergenic L1MB7|LINE|L1 242391 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr17-2047 chr17 49543373 49543583 + 8.37 0.000 intron (NR_103773, intron 1 of 2) L1MEc|LINE|L1 30586 NR_103773 100288866 Hs.720309 NR_103773 ENSG00000249906 LOC100288866 - uncharacterized LOC100288866 ncRNA chr16-4537 chr16 64428379 64428589 + 8.37 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 693579 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr2-7422 chr2 10109428 10109638 + 8.37 0.000 Intergenic L1MEi|LINE|L1 -13035 NM_001165931 6241 Hs.226390 NM_001034 ENSG00000171848 RRM2 R2|RR2|RR2M ribonucleotide reductase regulatory subunit M2 protein-coding chr8-5983 chr8 21987000 21987210 + 8.37 0.000 intron (NM_015024, intron 13 of 27) intron (NM_015024, intron 13 of 27) -37029 NM_001286680 10361 Hs.131055 NM_182795 ENSG00000158806 NPM2 - nucleophosmin/nucleoplasmin 2 protein-coding chr4-5637 chr4 7243581 7243791 + 8.37 0.000 intron (NM_020777, intron 1 of 26) MER68|LTR|ERVL 51148 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr1-14534 chr1 51628858 51629068 + 8.37 0.000 intron (NM_148906, intron 1 of 22) AluSz|SINE|Alu 11871 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr18-2763 chr18 524585 524795 + 8.37 0.000 Intergenic Intergenic -9396 NR_136505 105376854 NR_136505 ENSG00000264265 LINC01925 - long intergenic non-protein coding RNA 1925 ncRNA chr4-6302 chr4 84879688 84879898 + 8.37 0.000 intron (NM_014991, intron 3 of 67) L1M5|LINE|L1 -85823 NR_152773 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr1-6363 chr1 8027166 8027376 + 8.37 0.000 promoter-TSS (NM_018948) promoter-TSS (NM_018948) -962 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr3-7633 chr3 25941040 25941250 + 8.37 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -67450 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr1-12805 chr1 84996966 84997176 + 8.37 0.000 promoter-TSS (NM_001330647) promoter-TSS (NM_001330647) 42 NM_001330647 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr3-2803 chr3 8606788 8606998 + 8.37 0.000 Intergenic Intergenic 35111 NR_024065 29931 Hs.433151 NM_013343 LINC00312 ERR-10|ERR10|LMCD1DN|LOH3CR2A|NAG-7|NAG7|NCRNA00312 long intergenic non-protein coding RNA 312 ncRNA chr6-5694 chr6 121349325 121349535 + 8.37 0.000 Intergenic Intergenic -14701 NM_001367759 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr1-16522 chr1 231165490 231165700 + 8.37 0.000 intron (NM_001300889, intron 3 of 11) intron (NM_001300889, intron 3 of 11) 2667 NM_001300889 440730 Hs.655089 NM_001004342 ENSG00000119283 TRIM67 TNL tripartite motif containing 67 protein-coding chr19-2311 chr19 14450598 14450808 + 8.37 0.000 intron (NM_002741, intron 5 of 21) intron (NM_002741, intron 5 of 21) 10426 NM_213560 5585 Hs.466044 NM_002741 ENSG00000123143 PKN1 DBK|PAK-1|PAK1|PKN|PKN-ALPHA|PRK1|PRKCL1 protein kinase N1 protein-coding chr10-8806 chr10 107952459 107952669 + 8.37 0.000 intron (NR_125760, intron 4 of 4) intron (NR_125760, intron 4 of 4) 116729 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr11-3127 chr11 44136620 44136830 + 8.37 0.000 intron (NM_207122, intron 7 of 13) intron (NM_207122, intron 7 of 13) 40528 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr5-3236 chr5 94548785 94548995 + 8.37 0.000 intron (NM_001145678, intron 2 of 20) L1M1|LINE|L1 69714 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr7-9490 chr7 136511834 136512044 + 8.37 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -356713 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr2-4977 chr2 203253750 203253960 + 8.37 0.000 intron (NM_177538, intron 4 of 12) LTR61|LTR|ERV1 15414 NM_177538 57404 Hs.446065 NM_020674 ENSG00000119004 CYP20A1 CYP-M cytochrome P450 family 20 subfamily A member 1 protein-coding chr14-2492 chr14 101917303 101917513 + 8.37 0.000 intron (NM_001161726, intron 14 of 14) intron (NM_001161726, intron 14 of 14) -47165 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr9-3406 chr9 132807084 132807294 + 8.37 0.000 intron (NM_001317959, intron 12 of 14) intron (NM_001317959, intron 12 of 14) -71155 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr22-1309 chr22 45644067 45644277 + 8.37 0.000 Intergenic AluSx3|SINE|Alu -27626 NM_001167621 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr13-3528 chr13 23109961 23110171 + 8.37 0.000 Intergenic L1PB1|LINE|L1 -70855 NM_000231 6445 Hs.37167 NM_000231 ENSG00000102683 SGCG 35DAG|A4|DAGA4|DMDA|DMDA1|LGMD2C|LGMDR5|MAM|SCARMD2|SCG3|gamma-SG sarcoglycan gamma protein-coding chr8-5624 chr8 100585712 100585922 + 8.37 0.000 intron (NM_152628, intron 11 of 13) intron (NM_152628, intron 11 of 13) -26058 NM_001270377 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr19-4108 chr19 16987338 16987548 + 8.37 0.000 intron (NM_015692, intron 13 of 41) Tigger2a|DNA|TcMar-Tigger 39367 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr20-1435 chr20 44461837 44462047 + 8.37 0.000 non-coding (NR_132342, exon 2 of 2) non-coding (NR_132342, exon 2 of 2) 3402 NR_132343 140834 Hs.357589 NM_001287807 ENSG00000168746 LINC01620 C20orf62|dJ1013A22.3 long intergenic non-protein coding RNA 1620 ncRNA chr1-7891 chr1 120069154 120069364 + 8.37 0.000 intron (NM_001200001, intron 1 of 21) CpG 403 NM_024408 4853 Hs.487360 NM_024408 ENSG00000134250 NOTCH2 AGS2|HJCYS|hN2 notch receptor 2 protein-coding chr7-3520 chr7 5850285 5850495 + 8.37 0.000 intron (NR_023382, intron 6 of 6) AluSq|SINE|Alu 27230 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr17-2599 chr17 79269312 79269522 + 8.37 0.000 intron (NM_001082575, intron 3 of 14) intron (NM_001082575, intron 3 of 14) 194480 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr10-5718 chr10 101078962 101079172 + 8.37 0.000 Intergenic Intergenic 12768 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr4-8563 chr4 166160981 166161191 + 8.37 0.000 Intergenic Intergenic 287849 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr14-4783 chr14 64847934 64848144 + 8.37 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) -24659 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr13-1872 chr13 26457285 26457495 + 8.37 0.000 Intergenic L2b|LINE|L2 -100293 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr17-2596 chr17 78401983 78402193 + 8.37 0.000 intron (NR_110602, intron 5 of 8) intron (NR_110602, intron 5 of 8) 23439 NR_110601 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr3-6890 chr3 155646953 155647163 + 8.37 0.000 intron (NM_001349252, intron 2 of 24) intron (NM_001349252, intron 2 of 24) 29285 NM_001130960 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr12-2782 chr12 58764325 58764535 + 8.37 0.000 intron (NR_120452, intron 1 of 7) intron (NR_120452, intron 1 of 7) 17286 NR_120452 101927653 Hs.130744 NR_120452 ENSG00000257259 LINC02388 - long intergenic non-protein coding RNA 2388 ncRNA chr3-2663 chr3 37453935 37454145 + 8.37 0.000 intron (NM_002207, intron 1 of 27) intron (NM_002207, intron 1 of 27) 1899 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr5-7390 chr5 23227639 23227849 + 8.37 0.000 Intergenic Intergenic -279865 NM_020227 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding chr2-12531 chr2 65993614 65993824 + 8.37 0.000 Intergenic L2c|LINE|L2 364609 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr19-3828 chr19 10887707 10887917 + 8.37 0.000 intron (NM_001370089, intron 1 of 14) intron (NM_001370089, intron 1 of 14) 15383 NM_001370089 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr5-7011 chr5 155454372 155454582 + 8.37 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 440722 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr16-4725 chr16 83980709 83980919 + 8.37 0.000 intron (NM_001329749, intron 3 of 11) (TCTCTG)n|Simple_repeat|Simple_repeat 12166 NM_001329749 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr2-10956 chr2 85430541 85430751 + 8.37 0.000 5' UTR (NM_201594, exon 11 of 21) 5' UTR (NM_201594, exon 11 of 21) 11715 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr22-973 chr22 25759920 25760130 + 8.37 0.000 intron (NM_001318245, intron 1 of 43) intron (NM_001318245, intron 1 of 43) 17837 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr10-7856 chr10 47158399 47158609 + 8.37 0.000 Intergenic Intergenic -141693 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr15-2673 chr15 77798375 77798585 + 8.37 0.000 intron (NM_001301186, intron 1 of 5) intron (NM_001301186, intron 1 of 5) -11431 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr6-2679 chr6 16334862 16335072 + 8.37 0.000 intron (NM_000332, intron 7 of 8) L3|LINE|CR1 96380 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chrX-4617 chrX 75417143 75417353 + 8.37 0.000 intron (NM_001146256, intron 8 of 10) intron (NM_001146256, intron 8 of 10) 105789 NM_144969 158866 Hs.253211 NM_144969 ENSG00000102383 ZDHHC15 DHHC15|MRX91 zinc finger DHHC-type containing 15 protein-coding chr18-2528 chr18 75408650 75408860 + 8.37 0.000 TTS (NM_001037331) TTS (NM_001037331) 18948 NM_001303482 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr6-4502 chr6 37381806 37382016 + 8.37 0.000 intron (NR_046399, intron 7 of 7) intron (NR_046399, intron 7 of 7) 27928 NM_183078 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr14-3023 chr14 55262351 55262561 + 8.37 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -8965 NM_017943 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr4-8417 chr4 152622071 152622281 + 8.37 0.000 3' UTR (NM_152680, exon 7 of 7) 3' UTR (NM_152680, exon 7 of 7) 57821 NM_152680 201799 Hs.518900 NM_152680 ENSG00000170006 TMEM154 - transmembrane protein 154 protein-coding chr2-6028 chr2 107688058 107688268 + 8.37 0.000 Intergenic Intergenic -65949 NR_126370 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chr2-6796 chr2 50900194 50900404 + 8.37 0.000 intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) 131833 NM_001330078 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr18-3312 chr18 55323419 55323629 + 8.37 0.000 intron (NM_001243228, intron 8 of 19) intron (NM_001243228, intron 8 of 19) -1683 NM_001243234 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr6-7532 chr6 68825969 68826179 + 8.37 0.000 intron (NM_001704, intron 3 of 31) L2a|LINE|L2 190792 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr1-12868 chr1 107295876 107296086 + 8.37 0.000 intron (NM_001113226, intron 1 of 6) L2|LINE|L2 147912 NM_001113228 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr11-5476 chr11 76178712 76178922 + 8.37 0.000 Intergenic Intergenic 27685 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr13-2786 chr13 100572974 100573184 + 8.37 0.000 intron (NM_001195087, intron 2 of 2) intron (NM_001195087, intron 2 of 2) 15713 NM_001195087 87769 Hs.350868 NM_033110 ENSG00000134864 GGACT A2LD1 gamma-glutamylamine cyclotransferase protein-coding chr13-3686 chr13 35720952 35721162 + 8.37 0.000 Intergenic Intergenic 23330 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr9-8450 chr9 122559262 122559472 + 8.37 0.000 Intergenic L1PA8|LINE|L1 6255 NM_001004457 138882 Hs.632682 NM_001004457 ENSG00000171501 OR1N2 OR9-23 olfactory receptor family 1 subfamily N member 2 protein-coding chr12-4718 chr12 50206626 50206836 + 8.37 0.000 intron (NM_016357, intron 4 of 10) intron (NM_016357, intron 4 of 10) -5198 NM_001243775 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chrX-5316 chrX 144679847 144680057 + 8.37 0.000 Intergenic MER4B-int|LTR|ERV1 -567551 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr2-14175 chr2 205580584 205580794 + 8.37 0.000 intron (NM_205863, intron 21 of 21) intron (NM_205863, intron 21 of 21) -101811 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr20-2147 chr20 37184935 37185145 + 8.37 0.000 intron (NM_001324306, intron 2 of 15) intron (NM_001324306, intron 2 of 15) -5492 NM_152503 140699 Hs.349125 NM_152503 ENSG00000101353 MROH8 C20orf131|C20orf132 maestro heat like repeat family member 8 protein-coding chr20-1503 chr20 33085448 33085658 + 8.37 0.000 intron (NM_182519, intron 4 of 15) MIR|SINE|MIR 4041 NM_182519 149954 Hs.38961 NM_182519 ENSG00000186191 BPIFB4 C20orf186|LPLUNC4|RY2G5|dJ726C3.5 BPI fold containing family B member 4 protein-coding chr2-6225 chr2 27506173 27506383 + 8.37 0.000 intron (NM_001486, intron 10 of 18) intron (NM_001486, intron 10 of 18) 9439 NM_001486 2646 Hs.89771 NM_001486 ENSG00000084734 GCKR FGQTL5|GKRP glucokinase regulator protein-coding chr6-5661 chr6 93721448 93721658 + 8.37 0.000 intron (NR_152795, intron 2 of 6) LTR50|LTR|ERVL 3250 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr6-4038 chr6 130779316 130779526 + 8.37 0.000 Intergenic Intergenic -47984 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr3-8566 chr3 152761944 152762154 + 8.37 0.000 Intergenic Intergenic -73082 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr12-5082 chr12 93811262 93811472 + 8.37 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -73544 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr1-5472 chr1 96674577 96674787 + 8.37 0.000 Intergenic L1MA3|LINE|L1 -46923 NM_021190 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr2-10853 chr2 61307722 61307932 + 8.37 0.000 intron (NM_014709, intron 27 of 79) AluJb|SINE|Alu 109550 NR_003707 100124537 Hs.675825 NR_003707 ENSG00000206937 SNORA70B - small nucleolar RNA, H/ACA box 70B snoRNA chrX-1112 chrX 18533274 18533484 + 8.37 0.000 intron (NM_001037343, intron 4 of 21) intron (NM_001037343, intron 4 of 21) 91155 NM_001037343 6792 Hs.659851 NM_003159 ENSG00000008086 CDKL5 CFAP247|EIEE2|ISSX|STK9 cyclin dependent kinase like 5 protein-coding chr15-4615 chr15 61564279 61564489 + 8.37 0.000 Intergenic Intergenic -165534 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr2-2806 chr2 40348761 40348971 + 8.37 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 81438 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr20-3915 chr20 32526817 32527027 + 8.37 0.000 intron (NM_001256798, intron 2 of 10) intron (NM_001256798, intron 2 of 10) 16963 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr16-5999 chr16 7434292 7434502 + 8.37 0.000 intron (NM_145893, intron 1 of 13) AluYk3|SINE|Alu 101552 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr5-5549 chr5 147760973 147761183 + 8.37 0.000 intron (NM_001270934, intron 1 of 20) intron (NM_001270934, intron 1 of 20) 21650 NM_001282282 9832 Hs.740461 NM_014790 ENSG00000176049 JAKMIP2 JAMIP2|NECC1 janus kinase and microtubule interacting protein 2 protein-coding chrX-4196 chrX 35237614 35237824 + 8.37 0.000 Intergenic L1PREC2|LINE|L1 294923 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr1-11383 chr1 47156185 47156395 + 8.37 0.000 Intergenic L1PA8|LINE|L1 18849 NM_001010969 284541 Hs.726474 NM_001010969 ENSG00000162365 CYP4A22 - cytochrome P450 family 4 subfamily A member 22 protein-coding chr22-1850 chr22 38098697 38098907 + 8.37 0.000 intron (NM_025045, intron 4 of 13) intron (NM_025045, intron 4 of 13) 11882 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chrX-3475 chrX 34810430 34810640 + 8.37 0.000 Intergenic Intergenic -132261 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr13-479 chr13 51803749 51803959 + 8.37 0.000 intron (NM_001031719, intron 1 of 7) CpG 308 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr7-4836 chr7 101753128 101753338 + 8.37 0.000 Intergenic MIRc|SINE|MIR -62774 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr10-3450 chr10 48705023 48705233 + 8.37 0.000 intron (NM_020945, intron 1 of 61) intron (NM_020945, intron 1 of 61) 19665 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr9-8400 chr9 119642596 119642806 + 8.37 0.000 Intergenic L1PA4|LINE|L1 -273266 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr9-7651 chr9 68385459 68385669 + 8.37 0.000 intron (NM_021965, intron 3 of 10) intron (NM_021965, intron 3 of 10) -27698 NR_015423 572558 Hs.552819 NR_015423 ENSG00000224958 PGM5-AS1 FAM233A PGM5 antisense RNA 1 ncRNA chr11-5786 chr11 5384346 5384556 + 8.37 0.000 intron (NM_001005567, intron 1 of 4) intron (NM_001005567, intron 1 of 4) -4926 NM_001004756 390059 Hs.553731 NM_001004756 ENSG00000184698 OR51M1 HOR5'Beta7|OR11-40 olfactory receptor family 51 subfamily M member 1 protein-coding chr2-13232 chr2 124537225 124537435 + 8.37 0.000 intron (NM_130773, intron 10 of 23) intron (NM_130773, intron 10 of 23) 512043 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr22-2675 chr22 36658841 36659051 + 8.37 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 43912 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr2-6881 chr2 84451314 84451524 + 8.37 0.000 intron (NM_003849, intron 1 of 8) intron (NM_003849, intron 1 of 8) 7861 NM_003849 8802 Hs.270428 NM_003849 ENSG00000163541 SUCLG1 GALPHA|MTDPS9|SUCLA1 succinate-CoA ligase alpha subunit protein-coding chr19-4572 chr19 11056619 11056829 + 8.37 0.000 intron (NM_001128846, intron 28 of 32) intron (NM_001128846, intron 28 of 32) -32638 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr11-10374 chr11 111923446 111923656 + 8.37 0.000 intron (NM_080659, intron 1 of 3) intron (NM_080659, intron 1 of 3) 189 NM_001368245 1410 Hs.53454 NM_001885 ENSG00000109846 CRYAB CMD1II|CRYA2|CTPP2|CTRCT16|HEL-S-101|HSPB5|MFM2 crystallin alpha B protein-coding chr20-3903 chr20 32017900 32018110 + 8.37 0.000 exon (NM_001365692, exon 4 of 10) exon (NM_001365692, exon 4 of 10) 7567 NM_001365692 140706 Hs.382151 NM_080625 ENSG00000101331 CCM2L C20orf160|dJ310O13.5 CCM2 like scaffold protein protein-coding chr3-3517 chr3 29693945 29694155 + 8.37 0.000 intron (NM_001003792, intron 4 of 13) intron (NM_001003792, intron 4 of 13) 240106 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr10-3407 chr10 30970756 30970966 + 8.37 0.000 intron (NR_026560, intron 1 of 6) intron (NR_026560, intron 1 of 6) 28656 NM_001143769 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr1-6094 chr1 118689723 118689933 + 8.37 0.000 Intergenic MER50|LTR|ERV1 298515 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr4-6320 chr4 88758426 88758636 + 8.37 0.000 intron (NM_001015045, intron 8 of 17) intron (NM_001015045, intron 8 of 17) 48742 NR_002806 285512 Hs.744957 NR_002806 ENSG00000248019 FAM13A-AS1 FAM13A1OS|FAM13AOS|NCRNA00039 FAM13A antisense RNA 1 ncRNA chr17-5231 chr17 17337263 17337473 + 8.37 0.000 intron (NM_020201, intron 3 of 4) AluJr|SINE|Alu 33995 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chrX-1836 chrX 104335034 104335244 + 8.37 0.000 Intergenic L2a|LINE|L2 -80206 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr15-3369 chr15 85280988 85281198 + 8.37 0.000 Intergenic Intergenic 40742 NM_001310153 100133220 Hs.454625 NM_001310153 GOLGA6L3 - golgin A6 family like 3 protein-coding chr22-2258 chr22 29857843 29858053 + 8.37 0.000 Intergenic SVA_D|Retroposon|SVA -19674 NM_001369922 84164 Hs.731754 NM_032204 ENSG00000100325 ASCC2 ASC1p100|p100 activating signal cointegrator 1 complex subunit 2 protein-coding chr5-3593 chr5 95940122 95940332 + 8.37 0.000 intron (NM_012081, intron 2 of 11) intron (NM_012081, intron 2 of 11) 21624 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr14-2841 chr14 27911399 27911609 + 8.37 0.000 Intergenic MSTA|LTR|ERVL-MaLR -238283 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chr17-4930 chr17 76858145 76858355 + 8.37 0.000 intron (NR_135284, intron 1 of 1) MER4B|LTR|ERV1 2084 NR_135284 283994 Hs.645372 NR_135283 ENSG00000267535 LINC00868 C17orf52 long intergenic non-protein coding RNA 868 ncRNA chr4-1168 chr4 901270 901480 + 8.37 0.000 intron (NM_005255, intron 5 of 27) intron (NM_005255, intron 5 of 27) 30941 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr10-6430 chr10 20395627 20395837 + 8.37 0.000 Intergenic Intergenic -156238 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr9-3940 chr9 135864599 135864809 + 8.37 0.000 intron (NM_015447, intron 4 of 16) intron (NM_015447, intron 4 of 16) 42842 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr14-2947 chr14 48757794 48758004 + 8.37 0.000 Intergenic HERV16-int|LTR|ERVL 828481 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr8-2572 chr8 41701656 41701866 + 8.37 0.000 intron (NM_020475, intron 21 of 41) CpG -36487 NM_020480 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr9-6932 chr9 96031147 96031357 + 8.37 0.000 Intergenic L2a|LINE|L2 -9441 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092 long intergenic non-protein coding RNA 92 ncRNA chr4-4539 chr4 70335801 70336011 + 8.37 0.000 exon (NM_033122, exon 1 of 2) exon (NM_033122, exon 1 of 2) 925 NM_033122 85438 Hs.120316 NM_033122 ENSG00000145309 CABS1 C4orf35|CLPH|NYD-SP26 calcium binding protein, spermatid associated 1 protein-coding chr17-6732 chr17 81480538 81480748 + 8.37 0.000 Intergenic LTR33|LTR|ERVL -29455 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr10-4680 chr10 132234856 132235066 + 8.37 0.000 intron (NM_001318878, intron 2 of 11) intron (NM_001318878, intron 2 of 11) 14147 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr9-6262 chr9 129865202 129865412 + 8.37 0.000 exon (NM_001110303, exon 10 of 26) exon (NM_001110303, exon 10 of 26) -4298 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr9-4584 chr9 95006333 95006543 + 8.37 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -58912 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr22-3218 chr22 39575570 39575780 + 8.37 0.000 intron (NM_001003406, intron 1 of 35) intron (NM_001003406, intron 1 of 35) 4922 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr3-6064 chr3 51356008 51356218 + 8.37 0.000 exon (NM_004947, exon 42 of 53) exon (NM_004947, exon 42 of 53) -29178 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr18-3257 chr18 49967485 49967695 + 8.37 0.000 intron (NM_001080467, intron 10 of 39) intron (NM_001080467, intron 10 of 39) 153567 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr20-1293 chr20 52312322 52312532 + 8.37 0.000 Intergenic Intergenic -120442 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr5-7500 chr5 35356659 35356869 + 8.37 0.000 Intergenic Intergenic -126277 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr2-11779 chr2 13893931 13894141 + 8.37 0.000 Intergenic L1MA5|LINE|L1 506922 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr17-3463 chr17 41826242 41826452 + 8.37 0.000 intron (NR_033465, intron 7 of 7) AluJb|SINE|Alu -9338 NM_001329595 317719 Hs.127510 NM_152467 ENSG00000161594 KLHL10 SPGF11 kelch like family member 10 protein-coding chrX-1855 chrX 112165394 112165604 + 8.37 0.000 intron (NM_001004308, intron 2 of 2) intron (NM_001004308, intron 2 of 2) 82474 NM_001004308 340595 Hs.368140 NM_001004308 ENSG00000187823 RTL4 Mar4|Mart4|SIRH11|ZCCHC16 retrotransposon Gag like 4 protein-coding chr6-2987 chr6 41455409 41455619 + 8.37 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -46930 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr11-5627 chr11 119486944 119487154 + 8.37 0.000 intron (NR_034160, intron 3 of 3) intron (NR_034160, intron 3 of 3) -62064 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr5-8513 chr5 133866009 133866219 + 8.37 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -47563 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr17-7673 chr17 30549472 30549682 + 8.37 0.000 Intergenic MER1A|DNA|hAT-Charlie -26888 NR_015341 107133515 Hs.568209 NR_015341 SMURF2P1-LRRC37BP1 - SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene pseudo chr20-1490 chr20 19077660 19077870 + 8.37 0.000 Intergenic L2a|LINE|L2 -134877 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr2-10109 chr2 59769771 59769981 + 8.37 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 552168 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chrX-1652 chrX 136554917 136555127 + 8.37 0.000 intron (NM_016267, intron 4 of 4) L2-3_Crp|LINE|L2 4144 NR_030631 100126324 NR_030631 ENSG00000216060 MIR934 MIRN934|hsa-mir-934|mir-934 microRNA 934 ncRNA chrX-1020 chrX 53466087 53466297 + 8.37 0.000 Intergenic AluSx1|SINE|Alu -31816 NM_004493 3028 Hs.171280 NM_004493 ENSG00000072506 HSD17B10 17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|HSD10MD|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1 hydroxysteroid 17-beta dehydrogenase 10 protein-coding chr2-5933 chr2 26594421 26594631 + 8.37 0.000 intron (NM_001029881, intron 4 of 6) intron (NM_001029881, intron 4 of 6) 31939 NM_001322426 339778 Hs.407083 NM_001105519 ENSG00000173557 C2orf70 - chromosome 2 open reading frame 70 protein-coding chr1-6407 chr1 11540449 11540659 + 8.37 0.000 Intergenic Intergenic 61399 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr5-970 chr5 168746445 168746655 + 8.37 0.000 intron (NM_003062, intron 20 of 35) intron (NM_003062, intron 20 of 35) 21705 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr15-3534 chr15 101062942 101063152 + 8.37 0.000 intron (NM_024652, intron 31 of 33) intron (NM_024652, intron 31 of 33) 143690 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr11-1123 chr11 34174380 34174590 + 8.37 0.000 intron (NM_145804, intron 3 of 16) CpG 68856 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chrX-2037 chrX 17009232 17009442 + 8.37 0.000 intron (NM_001080975, intron 2 of 17) AluJb|SINE|Alu 62679 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr10-4354 chr10 32111654 32111864 + 8.37 0.000 Intergenic Intergenic -55334 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chrX-1123 chrX 23901914 23902124 + 8.37 0.000 intron (NM_024122, intron 1 of 8) L2c|LINE|L2 5919 NR_026545 79135 Hs.495851 NM_024122 ENSG00000184831 APOO FAM121B|MIC26|MICOS26|Mic23|My025 apolipoprotein O protein-coding chr14-2269 chr14 23695042 23695252 + 8.37 0.000 Intergenic HERV3-int|LTR|ERV1 58783 NM_005794 10202 Hs.272499 NM_005794 ENSG00000100867 DHRS2 HEP27|SDR25C1 dehydrogenase/reductase 2 protein-coding chr7-8968 chr7 99409446 99409656 + 8.37 0.000 promoter-TSS (NM_014891) promoter-TSS (NM_014891) 379 NR_162133 113219453 NR_162133 MIR12119 - microRNA 12119 ncRNA chr2-8479 chr2 126468988 126469198 + 8.37 0.000 Intergenic Intergenic -186842 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr8-3792 chr8 26531843 26532053 + 8.37 0.000 intron (NM_001197293, intron 1 of 13) intron (NM_001197293, intron 1 of 13) 17917 NM_001197293 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr4-2355 chr4 2714118 2714328 + 8.37 0.000 intron (NM_001256666, intron 18 of 19) intron (NM_001256666, intron 18 of 19) 42113 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr6-8447 chr6 153268926 153269136 + 8.37 0.000 Intergenic L1M2|LINE|L1 -137749 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr10-2504 chr10 43138819 43139029 + 8.37 0.000 intron (NM_018590, intron 1 of 7) intron (NM_018590, intron 1 of 7) 479 NR_135077 55454 Hs.657569 NM_018590 ENSG00000169826 CSGALNACT2 CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding chr10-8646 chr10 99605975 99606185 + 8.37 0.000 Intergenic Intergenic 14359 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding chr16-6054 chr16 10888978 10889188 + 8.37 0.000 intron (NR_104444, intron 1 of 17) intron (NR_104444, intron 1 of 17) 11881 NM_001286403 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding chr2-5356 chr2 96104292 96104502 + 8.37 0.000 Intergenic G-rich|Low_complexity|Low_complexity 12174 NM_000682 151 Hs.247686 NM_000682 ENSG00000274286 ADRA2B ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR adrenoceptor alpha 2B protein-coding chr11-5593 chr11 111455675 111455885 + 8.37 0.000 Intergenic Intergenic -37594 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr1-4770 chr1 10904783 10904993 + 8.37 0.000 Intergenic Intergenic 61799 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr1-5681 chr1 45375240 45375450 + 8.37 0.000 intron (NM_007170, intron 4 of 10) L2a|LINE|L2 -34875 NR_146882 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr8-2939 chr8 27268801 27269011 + 8.37 0.000 Intergenic Intergenic -10502 NM_001283055 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding chr16-3129 chr16 71901609 71901819 + 8.37 0.000 intron (NM_001270979, intron 1 of 5) intron (NM_001270979, intron 1 of 5) 6183 NM_014761 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr20-2809 chr20 57552270 57552480 + 8.37 0.000 Intergenic FLAM_C|SINE|Alu -8735 NM_002591 5105 Hs.1872 NM_002591 ENSG00000124253 PCK1 PCKDC|PEPCK-C|PEPCK1|PEPCKC phosphoenolpyruvate carboxykinase 1 protein-coding chr22-2226 chr22 22067343 22067553 + 8.37 0.000 Intergenic Intergenic -23514 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr3-10222 chr3 121997737 121997947 + 8.37 0.000 intron (NM_001199800, intron 3 of 5) Charlie20a|DNA|hAT-Charlie 24405 NM_001199800 286676 Hs.98484 NM_175924 ENSG00000145103 ILDR1 DFNB42|ILDR1alpha|ILDR1alpha'|ILDR1beta immunoglobulin like domain containing receptor 1 protein-coding chr11-9666 chr11 67158280 67158490 + 8.37 0.000 intron (NR_027473, intron 2 of 20) L1MC2|LINE|L1 39122 NR_027473 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr15-1791 chr15 80616165 80616375 + 8.37 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 35167 NR_049837 100847042 NR_049837 ENSG00000284059 MIR5572 - microRNA 5572 ncRNA chr1-3771 chr1 3720274 3720484 + 8.37 0.000 intron (NM_001204185, intron 4 of 12) intron (NM_001204185, intron 4 of 12) 22333 NM_001204192 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr6-2883 chr6 8280142 8280352 + 8.37 0.000 Intergenic Intergenic 155298 NM_001370478 51000 Hs.285847 NM_015948 ENSG00000124786 SLC35B3 C6orf196|CGI-19|PAPST2 solute carrier family 35 member B3 protein-coding chr9-7135 chr9 132136169 132136379 + 8.37 0.000 Intergenic Intergenic -25784 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr20-1715 chr20 38788095 38788305 + 8.37 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -17497 NM_015568 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr13-3467 chr13 112908212 112908422 + 8.37 0.000 Intergenic Intergenic 60321 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr2-14159 chr2 204001309 204001519 + 8.37 0.000 Intergenic LTR33|LTR|ERVL 64666 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr9-4950 chr9 15780940 15781150 + 8.37 0.000 intron (NM_001355547, intron 19 of 24) intron (NM_001355547, intron 19 of 24) 217067 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr16-6709 chr16 71856782 71856992 + 8.37 0.000 3' UTR (NM_001137675, exon 3 of 3) 3' UTR (NM_001137675, exon 3 of 3) 10911 NM_001137675 342371 Hs.743239 NM_001137675 ENSG00000224470 ATXN1L BOAT|BOAT1 ataxin 1 like protein-coding chr2-6995 chr2 138650573 138650783 + 8.37 0.000 Intergenic Intergenic 129712 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chr18-717 chr18 23541034 23541244 + 8.37 0.000 exon (NM_000271, exon 16 of 25) exon (NM_000271, exon 16 of 25) 37628 NM_013326 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr5-3119 chr5 54515005 54515215 + 8.37 0.000 Intergenic Intergenic -2649 NM_001145427 112574 Hs.432755 NM_052870 ENSG00000178996 SNX18 SH3PX2|SH3PXD3B|SNAG1 sorting nexin 18 protein-coding chr2-8952 chr2 188561909 188562119 + 8.37 0.000 intron (NM_016315, intron 7 of 11) intron (NM_016315, intron 7 of 11) 228109 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr22-3872 chr22 34191005 34191215 + 8.37 0.000 Intergenic L2a|LINE|L2 -268222 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr17-6831 chr17 15124722 15124932 + 8.37 0.000 Intergenic MER5A1|DNA|hAT-Charlie -18640 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr5-2892 chr5 111209418 111209628 + 8.37 0.000 Intergenic HERV16-int|LTR|ERVL -14060 NM_001323375 814 Hs.438801 NM_001744 ENSG00000152495 CAMK4 CaMK IV|CaMK-GR|CaMKIV|caMK calcium/calmodulin dependent protein kinase IV protein-coding chr5-3587 chr5 87781129 87781339 + 8.37 0.000 Intergenic Intergenic 119192 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr11-4808 chr11 6027152 6027362 + 8.37 0.000 exon (NM_001001917, exon 1 of 1) exon (NM_001001917, exon 1 of 1) 484 NM_001001917 120796 Hs.553543 NM_001001917 ENSG00000180934 OR56A1 OR11-75 olfactory receptor family 56 subfamily A member 1 protein-coding chr15-3660 chr15 98536180 98536390 + 8.37 0.000 Intergenic L1P4e|LINE|L1 -21949 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding chr1-16696 chr1 246005307 246005517 + 8.37 0.000 intron (NM_022743, intron 5 of 11) MIRc|SINE|MIR 412000 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr2-7135 chr2 191501664 191501874 + 8.37 0.000 Intergenic Intergenic -176303 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr3-3868 chr3 38069473 38069683 + 8.37 0.000 intron (NM_007335, intron 6 of 36) intron (NM_007335, intron 6 of 36) 30370 NM_001321153 9940 Hs.714499 NM_007335 ENSG00000008226 DLEC1 CFAP81|DLC-1|DLC1|F56 DLEC1 cilia and flagella associated protein protein-coding chr2-11156 chr2 146123698 146123908 + 8.37 0.000 Intergenic Intergenic -463254 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr13-1693 chr13 79692916 79693126 + 8.37 0.000 Intergenic MLT1J2-int|LTR|ERVL-MaLR -111365 NR_125785 102724076 Hs.208617 NR_125785 ENSG00000229011 LINC01038 - long intergenic non-protein coding RNA 1038 ncRNA chr1-11975 chr1 83559845 83560055 + 8.37 0.000 Intergenic Intergenic 113896 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr11-7125 chr11 125269767 125269977 + 8.37 0.000 intron (NM_022062, intron 2 of 12) intron (NM_022062, intron 2 of 12) 105121 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr8-4191 chr8 82103976 82104186 + 8.37 0.000 Intergenic Intergenic -261795 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chrX-2386 chrX 70846387 70846597 + 8.37 0.000 promoter-TSS (NR_145758) promoter-TSS (NR_145758) -197 NR_145758 109617015 NR_145758 ENSG00000280704 SNORD3E - small nucleolar RNA, C/D box 3E snoRNA chr10-8642 chr10 99345166 99345376 + 8.37 0.000 intron (NM_020348, intron 1 of 10) intron (NM_020348, intron 1 of 10) 15915 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr2-9809 chr2 135668677 135668887 + 8.37 0.000 intron (NM_001282798, intron 18 of 25) MamRTE1|LINE|RTE-BovB 3385 NR_029672 406915 NR_029672 ENSG00000207654 MIR128-1 MIR128A|MIRN128-1|MIRN128A|mir-128-1 microRNA 128-1 ncRNA chr17-6318 chr17 59746826 59747036 + 8.37 0.000 intron (NM_001329401, intron 4 of 9) intron (NM_001329401, intron 4 of 9) 39277 NM_001329399 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding chr2-3469 chr2 159798842 159799052 + 8.37 0.000 promoter-TSS (NM_001198763) promoter-TSS (NM_001198763) -692 NM_001198763 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr9-3953 chr9 136591657 136591867 + 8.37 0.000 Intergenic ERVL-E-int|LTR|ERVL 25419 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr6-7501 chr6 63586693 63586903 + 8.37 0.000 Intergenic L1PA10|LINE|L1 14786 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr13-3899 chr13 53764010 53764220 + 8.37 0.000 Intergenic L1PA13|LINE|L1 -51304 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr7-4304 chr7 29189787 29189997 + 8.37 0.000 5' UTR (NM_001371267, exon 1 of 17) 5' UTR (NM_001371267, exon 1 of 17) 165 NM_001371267 chr20-4317 chr20 51910645 51910855 + 8.37 0.000 Intergenic Intergenic -47837 NR_110016 101927678 Hs.683840 NR_110016 ENSG00000227964 LINC01429 - long intergenic non-protein coding RNA 1429 ncRNA chr17-4849 chr17 62059563 62059773 + 8.37 0.000 intron (NM_005121, intron 2 of 29) intron (NM_005121, intron 2 of 29) 5610 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr20-3758 chr20 19588953 19589163 + 8.37 0.000 intron (NM_020689, intron 6 of 16) intron (NM_020689, intron 6 of 16) -297463 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr2-5277 chr2 62641816 62642026 + 8.37 0.000 Intergenic Intergenic -31957 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr11-10251 chr11 101531691 101531901 + 8.37 0.000 intron (NM_004621, intron 1 of 12) intron (NM_004621, intron 1 of 12) -11891 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr2-9488 chr2 236167920 236168130 + 8.37 0.000 5' UTR (NM_001485, exon 1 of 2) 5' UTR (NM_001485, exon 1 of 2) 361 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr10-6216 chr10 47168366 47168576 + 8.37 0.000 Intergenic AluSg7|SINE|Alu -131726 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr6-8234 chr6 136839909 136840119 + 8.37 0.000 intron (NM_000288, intron 3 of 9) L2a|LINE|L2 17422 NM_000288 5191 Hs.280932 NM_000288 ENSG00000112357 PEX7 PBD9B|PTS2R|RCDP1|RD peroxisomal biogenesis factor 7 protein-coding chr5-6429 chr5 156907126 156907336 + 8.37 0.000 Intergenic Intergenic 55995 NM_001146726 91937 Hs.334907 NM_138379 ENSG00000145850 TIMD4 SMUCKLER|TIM4 T cell immunoglobulin and mucin domain containing 4 protein-coding chr20-1755 chr20 49729785 49729995 + 8.37 0.000 Intergenic Intergenic -16012 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr12-3845 chr12 98175734 98175944 + 8.37 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -180391 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr8-1502 chr8 58279002 58279212 + 8.37 0.000 Intergenic L2b|LINE|L2 -7006 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr7-9073 chr7 104569753 104569963 + 8.37 0.000 intron (NM_199000, intron 1 of 2) MIR|SINE|MIR 234234 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr9-7727 chr9 73863408 73863618 + 8.37 0.000 Intergenic L1ME3A|LINE|L1 -508018 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr12-8096 chr12 118620861 118621071 + 8.37 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 140713 NR_134998 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA chr8-2578 chr8 42688620 42688830 + 8.37 0.000 Intergenic Intergenic -8641 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr14-2126 chr14 76352753 76352963 + 8.37 0.000 Intergenic CpG -18489 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr12-3637 chr12 95319995 95320205 + 8.37 0.000 Intergenic Intergenic 10177 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr6-7990 chr6 115623512 115623722 + 8.37 0.000 Intergenic L1PB4|LINE|L1 20218 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chrX-5100 chrX 127858737 127858947 + 8.37 0.000 Intergenic L1PA16|LINE|L1 193561 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr16-6051 chr16 10711909 10712119 + 8.37 0.000 Intergenic SATR1|Satellite|Satellite -17084 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr1-14166 chr1 32720050 32720260 + 8.37 0.000 Intergenic Intergenic -17385 NM_001161708 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr17-3757 chr17 31067777 31067987 + 8.37 0.000 Intergenic Intergenic -8773 NR_146737 646030 NR_146737 LOC646030 - leucine rich repeat containing 37B pseudogene pseudo chrX-1896 chrX 134870337 134870547 + 8.37 0.000 Intergenic Intergenic 44815 NM_019556 56180 Hs.590789 NM_019556 ENSG00000101928 MOSPD1 DJ473B4 motile sperm domain containing 1 protein-coding chr4-7853 chr4 102569426 102569636 + 8.37 0.000 intron (NM_003998, intron 6 of 23) intron (NM_003998, intron 6 of 23) -67045 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chr16-3216 chr16 85477993 85478203 + 8.37 0.000 Intergenic L1MB7|LINE|L1 -133311 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chrX-1944 chrX 4343534 4343744 + 8.37 0.000 Intergenic Intergenic 289933 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr20-4404 chr20 58834215 58834425 + 8.37 0.000 intron (NR_002785, intron 4 of 4) intron (NR_002785, intron 4 of 4) -5428 NM_016592 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|PITA3|POH|SCG6|SgVI GNAS complex locus protein-coding chr7-6894 chr7 70685055 70685265 + 8.37 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -446984 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr12-4189 chr12 94544519 94544729 + 8.37 0.000 Intergenic L1MB3|LINE|L1 -17165 NR_049885 100847031 NR_049885 ENSG00000266099 MIR5700 - microRNA 5700 ncRNA chr2-5560 chr2 167693790 167694000 + 8.37 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -124777 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr5-8916 chr5 157326114 157326324 + 8.37 0.000 exon (NM_001291721, exon 17 of 30) exon (NM_001291721, exon 17 of 30) 19458 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr16-2805 chr16 66320210 66320420 + 8.37 0.000 Intergenic Intergenic -46376 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr13-1844 chr13 101487944 101488154 + 8.37 0.000 intron (NM_001271755, intron 2 of 9) intron (NM_001271755, intron 2 of 9) -1903 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr9-4930 chr9 13215897 13216107 + 8.37 0.000 intron (NM_003829, intron 10 of 45) intron (NM_003829, intron 10 of 45) 63562 NM_001261406 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr4-4080 chr4 3851494 3851704 + 8.37 0.000 Intergenic Intergenic 85214 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr11-4878 chr11 44011819 44012029 + 8.37 0.000 Intergenic Intergenic -36057 NM_001363113 390110 Hs.558851 NM_001031854 ENSG00000205126 ACCSL - 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like protein-coding chr9-8660 chr9 129988901 129989111 + 8.37 0.000 intron (NM_001363755, intron 2 of 15) intron (NM_001363755, intron 2 of 15) 54183 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr3-9726 chr3 67275542 67275752 + 8.37 0.000 Intergenic Intergenic 50183 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr4-4415 chr4 46556898 46557108 + 8.37 0.000 Intergenic HAL1|LINE|L1 -166875 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr18-1017 chr18 57775798 57776008 + 8.37 0.000 intron (NM_005603, intron 1 of 27) AluSp|SINE|Alu 27412 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr6-7575 chr6 73063979 73064189 + 8.37 0.000 intron (NM_001160132, intron 3 of 13) intron (NM_001160132, intron 3 of 13) 79430 NR_046621 100873997 Hs.741819 NR_046621 ENSG00000229154 KCNQ5-AS1 - KCNQ5 antisense RNA 1 ncRNA chr16-6780 chr16 77471667 77471877 + 8.37 0.000 Intergenic Intergenic -36738 NM_001326358 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr19-3661 chr19 5439135 5439345 + 8.37 0.000 Intergenic AluSx1|SINE|Alu -16177 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr20-2623 chr20 41703962 41704172 + 8.37 0.000 Intergenic Intergenic -85690 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr14-4767 chr14 63030000 63030210 + 8.37 0.000 intron (NM_139318, intron 1 of 10) intron (NM_139318, intron 1 of 10) 15353 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr16-2691 chr16 81486864 81487074 + 8.37 0.000 intron (NM_198390, intron 1 of 20) intron (NM_198390, intron 1 of 20) -8385 NM_030629 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding chr4-5258 chr4 171992422 171992632 + 8.37 0.000 intron (NM_001034845, intron 2 of 12) intron (NM_001034845, intron 2 of 12) -178920 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr11-8127 chr11 46250225 46250435 + 8.37 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -27332 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr10-5710 chr10 100813481 100813691 + 8.37 0.000 intron (NM_003988, intron 7 of 10) L1MEd|LINE|L1 67875 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr18-1885 chr18 28546057 28546267 + 8.37 0.000 Intergenic Intergenic -369032 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr14-3172 chr14 70087222 70087432 + 8.37 0.000 intron (NM_033262, intron 2 of 7) intron (NM_033262, intron 2 of 7) -7110 NM_001130417 6547 Hs.337696 NM_033262 ENSG00000100678 SLC8A3 NCX3 solute carrier family 8 member A3 protein-coding chr7-4106 chr7 43137965 43138175 + 8.37 0.000 intron (NR_135295, intron 3 of 6) intron (NR_135295, intron 3 of 6) -12825 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr1-15118 chr1 101819263 101819473 + 8.37 0.000 intron (NR_110211, intron 4 of 6) L2|LINE|L2 27712 NM_001288821 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr2-10841 chr2 58379978 58380188 + 8.37 0.000 Intergenic L2a|LINE|L2 104206 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA chr2-6448 chr2 157793088 157793298 + 8.37 0.000 intron (NM_001111067, intron 3 of 10) intron (NM_001111067, intron 3 of 10) 45437 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr3-9897 chr3 84031284 84031494 + 8.37 0.000 Intergenic L1PA13|LINE|L1 838186 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr7-8404 chr7 45593326 45593536 + 8.37 0.000 intron (NM_001281768, intron 3 of 9) intron (NM_001281768, intron 3 of 9) 19063 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr2-8608 chr2 141087804 141088014 + 8.37 0.000 intron (NM_018557, intron 7 of 90) MIRc|SINE|MIR -501224 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr10-1695 chr10 17403990 17404200 + 8.37 0.000 intron (NR_034129, intron 2 of 2) intron (NR_034129, intron 2 of 2) 17159 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr18-2876 chr18 9797723 9797933 + 8.37 0.000 intron (NM_006868, intron 3 of 6) intron (NM_006868, intron 3 of 6) -88145 NM_032243 84203 Hs.98712 NM_032243 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 protein-coding chr15-2386 chr15 57031313 57031523 + 8.37 0.000 intron (NM_001322164, intron 3 of 19) intron (NM_001322164, intron 3 of 19) 111973 NM_001322164 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr15-4439 chr15 45641346 45641556 + 8.37 0.000 intron (NM_021199, intron 1 of 9) intron (NM_021199, intron 1 of 9) 6422 NM_021199 58472 Hs.511251 NM_021199 ENSG00000137767 SQOR CGI-44|PRO1975|SQR|SQRDL sulfide quinone oxidoreductase protein-coding chr10-7966 chr10 58091047 58091257 + 8.37 0.000 Intergenic AluJb|SINE|Alu 176742 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr19-4238 chr19 50071590 50071800 + 8.37 0.000 intron (NR_138096, intron 3 of 4) MER68|LTR|ERVL 20914 NR_024228 100169958 Hs.723094 NR_024228 SNAR-A8 - small NF90 (ILF3) associated RNA A8 snRNA chr22-3784 chr22 29213745 29213955 + 8.37 0.000 intron (NM_001267895, intron 1 of 14) intron (NM_001267895, intron 1 of 14) 7954 NM_133455 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr8-5099 chr8 55747953 55748163 + 8.37 0.000 intron (NM_001286661, intron 3 of 4) intron (NM_001286661, intron 3 of 4) 25320 NM_001286661 137695 Hs.420076 NM_152417 ENSG00000167904 TMEM68 - transmembrane protein 68 protein-coding chr4-6734 chr4 4564412 4564622 + 8.37 0.000 intron (NR_037888, intron 2 of 5) MLT1J|LTR|ERVL-MaLR -22174 NM_001346282 53407 Hs.584913 NM_016930 ENSG00000168818 STX18 Ufe1 syntaxin 18 protein-coding chr12-3179 chr12 51421468 51421678 + 8.37 0.000 intron (NM_001258401, intron 1 of 24) intron (NM_001258401, intron 1 of 24) -3258 NM_001258402 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr3-5404 chr3 159192189 159192399 + 8.37 0.000 intron (NM_001197113, intron 1 of 10) intron (NM_001197113, intron 1 of 10) -80953 NM_001197107 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr5-6023 chr5 156287652 156287862 + 8.37 0.000 Intergenic AluJr|SINE|Alu -39000 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr9-3987 chr9 137802962 137803172 + 8.37 0.000 intron (NM_001354263, intron 18 of 26) intron (NM_001354263, intron 18 of 26) -14661 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr2-14706 chr2 238221175 238221385 + 8.37 0.000 Intergenic MER52C|LTR|ERV1 10397 NR_026926 151174 Hs.424165 NR_026925 ENSG00000186235 LINC02610 - long intergenic non-protein coding RNA 2610 ncRNA chr11-5671 chr11 128934342 128934552 + 8.37 0.000 TTS (NM_001195195) TTS (NM_001195195) 3387 NM_001195194 63970 Hs.160953 NM_022112 ENSG00000120471 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding chr12-5097 chr12 94897229 94897439 + 8.37 0.000 Intergenic Intergenic 62880 NR_036685 160313 Hs.527883 NR_036685 ENSG00000216306 KRT19P2 KRT19P5 keratin 19 pseudogene 2 pseudo chr7-8708 chr7 74515909 74516119 + 8.37 0.000 intron (NM_016328, intron 4 of 26) L2b|LINE|L2 62108 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr11-7884 chr11 123944139 123944349 + 8.37 0.000 promoter-TSS (NM_001005187) promoter-TSS (NM_001005187) -406 NM_001005187 219874 Hs.553638 NM_001005187 ENSG00000181499 OR6T1 OR11-277 olfactory receptor family 6 subfamily T member 1 protein-coding chr9-7349 chr9 15104781 15104991 + 8.37 0.000 Intergenic Intergenic 111559 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chrX-697 chrX 64550146 64550356 + 8.37 0.000 Intergenic AluJr|SINE|Alu -154799 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr2-9325 chr2 224887438 224887648 + 8.37 0.000 intron (NM_001290263, intron 4 of 55) intron (NM_001290263, intron 4 of 55) 59506 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr7-5297 chr7 24701772 24701982 + 8.37 0.000 intron (NM_004403, intron 9 of 9) intron (NM_004403, intron 9 of 9) 55587 NM_001127453 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr6-2775 chr6 132551309 132551519 + 8.37 0.000 Intergenic MER45C|DNA|hAT-Tip100 -1270 NM_053278 83551 Hs.350571 NM_053278 ENSG00000146385 TAAR8 GPR102|TA5|TAR5|TRAR5|TaR-5|TaR-8 trace amine associated receptor 8 protein-coding chr7-8509 chr7 53843487 53843697 + 8.37 0.000 Intergenic Intergenic -31661 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr9-4477 chr9 34147852 34148062 + 8.37 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -21259 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr14-2013 chr14 58258185 58258395 + 8.37 0.000 intron (NM_152132, intron 5 of 10) AluJr|SINE|Alu 13447 NM_002788 5684 Hs.558799 NM_002788 ENSG00000100567 PSMA3 HC8|PSC3 proteasome subunit alpha 3 protein-coding chr3-8882 chr3 10774107 10774317 + 8.37 0.000 Intergenic Intergenic -10003 NR_027102 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA chr1-7901 chr1 155105921 155106131 + 8.37 0.000 Intergenic Intergenic -21850 NM_182685 1942 Hs.516664 NM_004428 ENSG00000169242 EFNA1 B61|ECKLG|EFL1|EPLG1|LERK-1|LERK1|TNFAIP4 ephrin A1 protein-coding chr9-2681 chr9 70883092 70883302 + 8.37 0.000 intron (NM_001366143, intron 1 of 25) MLT1M|LTR|ERVL-MaLR -14145 NM_206944 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr17-4510 chr17 74854389 74854599 + 8.37 0.000 intron (NM_001278553, intron 2 of 11) intron (NM_001278553, intron 2 of 11) 5390 NR_103735 2905 Hs.436980 NM_000835 ENSG00000161509 GRIN2C GluN2C|NMDAR2C|NR2C glutamate ionotropic receptor NMDA type subunit 2C protein-coding chr10-2274 chr10 132978759 132978969 + 8.37 0.000 Intergenic MSTD|LTR|ERVL-MaLR 13330 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA chr19-2659 chr19 10452942 10453152 + 8.37 0.000 5' UTR (NM_006202, exon 1 of 10) 5' UTR (NM_006202, exon 1 of 10) 115 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr2-7590 chr2 25537597 25537807 + 8.37 0.000 intron (NM_033147, intron 8 of 19) intron (NM_033147, intron 8 of 19) 112520 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr1-8218 chr1 25810991 25811201 + 8.37 0.000 intron (NM_020451, intron 7 of 12) intron (NM_020451, intron 7 of 12) -8810 NM_001099627 56181 Hs.149305 NM_019557 ENSG00000117640 MTFR1L FAM54B|HYST1888|MST116|MSTP116 mitochondrial fission regulator 1 like protein-coding chr20-2718 chr20 48546454 48546664 + 8.37 0.000 Intergenic MIR|SINE|MIR 186648 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr11-4860 chr11 30917817 30918027 + 8.37 0.000 intron (NM_001367979, intron 25 of 38) intron (NM_001367979, intron 25 of 38) 74764 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr9-6521 chr9 109273741 109273951 + 8.37 0.000 intron (NM_019114, intron 2 of 25) intron (NM_019114, intron 2 of 25) 47118 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr6-3988 chr6 112694962 112695172 + 8.37 0.000 Intergenic Intergenic 347737 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr8-6957 chr8 106080916 106081126 + 8.37 0.000 Intergenic Intergenic -20518 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr12-4800 chr12 55361762 55361972 + 8.37 0.000 Intergenic L1MA5|LINE|L1 -3244 NM_001005497 390323 Hs.554554 NM_001005497 ENSG00000187857 OR6C75 - olfactory receptor family 6 subfamily C member 75 protein-coding chr5-4384 chr5 176557076 176557286 + 8.37 0.000 intron (NM_017675, intron 1 of 31) intron (NM_017675, intron 1 of 31) 7839 NM_017675 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding chr20-2544 chr20 35975936 35976146 + 8.37 0.000 intron (NM_001365709, intron 3 of 11) intron (NM_001365709, intron 3 of 11) 7451 NM_080834 140894 Hs.732697 NM_080834 ENSG00000149646 CNBD2 C20orf152|CNMPD1 cyclic nucleotide binding domain containing 2 protein-coding chr7-5838 chr7 87112973 87113183 + 8.37 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 39239 NR_136252 101927420 Hs.633960 NR_136252 ENSG00000224046 LOC101927420 - uncharacterized LOC101927420 ncRNA chr7-9609 chr7 149221713 149221923 + 8.37 0.000 intron (NM_001303481, intron 7 of 8) intron (NM_001303481, intron 7 of 8) -17833 NM_012256 7988 Hs.490510 NM_012256 ENSG00000170260 ZNF212 C2H2-150|ZNF182|ZNFC150 zinc finger protein 212 protein-coding chrX-3615 chrX 85240018 85240228 + 8.37 0.000 intron (NM_001367858, intron 1 of 11) L1MDa|LINE|L1 3656 NM_001367857 340562 Hs.640783 NM_001012980 ENSG00000184788 SATL1 - spermidine/spermine N1-acetyl transferase like 1 protein-coding chr7-8988 chr7 100419102 100419312 + 8.37 0.000 intron (NM_001258008, intron 4 of 15) intron (NM_001258008, intron 4 of 15) 9496 NM_001258008 55063 Hs.105191 NM_017984 ENSG00000078487 ZCWPW1 ZCW1 zinc finger CW-type and PWWP domain containing 1 protein-coding chrX-5075 chrX 125364203 125364413 + 8.37 0.000 Intergenic L1PA11|LINE|L1 44437 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr4-6420 chr4 128782177 128782387 + 8.37 0.000 Intergenic L2a|LINE|L2 -27418 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr1-10696 chr1 190625917 190626127 + 8.37 0.000 intron (NR_033922, intron 1 of 4) L1MC4|LINE|L1 1132 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA chr12-5130 chr12 98699661 98699871 + 8.37 0.000 intron (NM_001160, intron 17 of 25) intron (NM_001160, intron 17 of 25) 54466 NM_181869 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr2-7643 chr2 27723248 27723458 + 8.37 0.000 intron (NR_160725, intron 2 of 2) MIRc|SINE|MIR 7230 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr10-6123 chr10 132835671 132835881 + 8.37 0.000 intron (NM_001200049, intron 46 of 57) intron (NM_001200049, intron 46 of 57) -49629 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr3-4470 chr3 48856036 48856246 + 8.37 0.000 TTS (NM_000387) TTS (NM_000387) 8204 NR_109996 100506637 Hs.634259 NR_109996 ENSG00000224424 PRKAR2A-AS1 - PRKAR2A antisense RNA 1 ncRNA chr4-6763 chr4 6494034 6494244 + 8.37 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) -21525 NM_001363388 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr4-3357 chr4 6856376 6856586 + 8.37 0.000 intron (NM_001100590, intron 3 of 8) intron (NM_001100590, intron 3 of 8) -52963 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr22-2281 chr22 34866383 34866593 + 8.37 0.000 intron (NR_138042, intron 3 of 4) THE1C|LTR|ERVL-MaLR 131428 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr1-7283 chr1 240194323 240194533 + 8.37 0.000 intron (NM_001348094, intron 4 of 14) MER67A|LTR|ERV1 102545 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr9-5430 chr9 96514921 96515131 + 8.37 0.000 intron (NM_001351567, intron 13 of 13) intron (NM_001351567, intron 13 of 13) 51805 NM_001351568 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr10-5651 chr10 97222800 97223010 + 8.37 0.000 3' UTR (NM_001256423, exon 12 of 12) 3' UTR (NM_001256423, exon 12 of 12) -36946 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr7-5553 chr7 45990052 45990262 + 8.37 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -68885 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr12-4257 chr12 115341142 115341352 + 8.37 0.000 Intergenic Intergenic -657072 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr20-3354 chr20 32041280 32041490 + 8.37 0.000 Intergenic L2c|LINE|L2 -10857 NM_001172130 3055 Hs.655210 NM_002110 ENSG00000101336 HCK JTK9|p59Hck|p61Hck HCK proto-oncogene, Src family tyrosine kinase protein-coding chr8-3646 chr8 4990667 4990877 + 8.37 0.000 intron (NM_033225, intron 1 of 69) intron (NM_033225, intron 1 of 69) 4142 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr3-10631 chr3 147187167 147187377 + 8.37 0.000 Intergenic Intergenic 205158 NR_033119 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chrX-2733 chrX 125327616 125327826 + 8.37 0.000 Intergenic Intergenic 7850 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr1-6864 chr1 111721918 111722128 + 8.37 0.000 TTS (NM_198926) TTS (NM_198926) 17372 NM_019099 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr4-1421 chr4 39240145 39240355 + 8.37 0.000 intron (NM_025132, intron 20 of 36) A-rich|Low_complexity|Low_complexity 57721 NM_001317924 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr20-2097 chr20 24443224 24443434 + 8.37 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -25870 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr20-1623 chr20 15690553 15690763 + 8.37 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 232656 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr1-12104 chr1 157832303 157832513 + 8.37 0.000 intron (NM_005894, intron 5 of 5) intron (NM_005894, intron 5 of 5) 9400 NM_005894 922 Hs.134035 NM_005894 ENSG00000073754 CD5L AIM|API6|CT-2|PRO229|SP-ALPHA|Spalpha|hAIM CD5 molecule like protein-coding chr4-8307 chr4 144233250 144233460 + 8.37 0.000 Intergenic L1M1|LINE|L1 -92637 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr8-3192 chr8 110939904 110940114 + 8.37 0.000 intron (NR_125417, intron 5 of 5) intron (NR_125417, intron 5 of 5) 87424 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr20-1700 chr20 36304710 36304920 + 8.37 0.000 Intergenic L1ME3E|LINE|L1 -1524 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr14-1315 chr14 60249685 60249895 + 8.37 0.000 intron (NM_021003, intron 1 of 5) CpG 569 NM_021003 5494 Hs.130036 NM_021003 ENSG00000100614 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent 1A protein-coding chr17-3262 chr17 32870026 32870236 + 8.37 0.000 intron (NM_015194, intron 1 of 21) intron (NM_015194, intron 1 of 21) 6993 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chrX-3242 chrX 70307795 70308005 + 8.37 0.000 intron (NM_012310, intron 7 of 30) L1MB7|LINE|L1 17796 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chr15-3992 chr15 52235342 52235552 + 8.37 0.000 intron (NM_018728, intron 23 of 40) intron (NM_018728, intron 23 of 40) 41753 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr2-7193 chr2 212813849 212814059 + 8.37 0.000 intron (NR_131941, intron 2 of 4) intron (NR_131941, intron 2 of 4) 18623 NR_131942 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr14-4436 chr14 32976169 32976379 + 8.37 0.000 intron (NM_001165893, intron 1 of 10) intron (NM_001165893, intron 1 of 10) 37395 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr2-13225 chr2 124152590 124152800 + 8.37 0.000 intron (NM_130773, intron 1 of 23) intron (NM_130773, intron 1 of 23) 127408 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr3-2475 chr3 127971092 127971302 + 8.37 0.000 intron (NM_001370224, intron 5 of 6) intron (NM_001370224, intron 5 of 6) 55965 NM_207335 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr11-9011 chr11 24847988 24848198 + 8.37 0.000 intron (NM_001252010, intron 5 of 9) L1MC4|LINE|L1 351040 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr8-5348 chr8 16973847 16974057 + 8.37 0.000 Intergenic L1PA7|LINE|L1 28393 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr2-8644 chr2 146360163 146360373 + 8.37 0.000 Intergenic Intergenic -226789 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr8-5420 chr8 31034749 31034959 + 8.37 0.000 intron (NM_000553, intron 1 of 34) LTR56|LTR|ERV1 -1498 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr2-12215 chr2 43018309 43018519 + 8.37 0.000 Intergenic L2|LINE|L2 21129 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr1-2174 chr1 32753820 32754030 + 8.37 0.000 promoter-TSS (NM_001369553) promoter-TSS (NM_001369553) -74 NM_001369553 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr1-11228 chr1 246414335 246414545 + 8.37 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 2972 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr19-2939 chr19 4465035 4465245 + 8.37 0.000 Intergenic AluJo|SINE|Alu -7157 NM_001001520 84717 Hs.43071 NM_032631 ENSG00000167674 HDGFL2 HDGF-2|HDGF2|HDGFRP2|HRP-2|HRP2 HDGF like 2 protein-coding chr1-6487 chr1 22155217 22155427 + 8.37 0.000 Intergenic AluSg|SINE|Alu -12225 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr17-4870 chr17 65561522 65561732 + 8.37 0.000 promoter-TSS (NM_004655) promoter-TSS (NM_004655) 21 NM_001363813 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr11-2286 chr11 10394827 10395037 + 8.37 0.000 intron (NR_103765, intron 2 of 3) intron (NR_103765, intron 2 of 3) -55389 NM_001172431 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr7-8448 chr7 47802472 47802682 + 8.37 0.000 intron (NM_138295, intron 53 of 56) intron (NM_138295, intron 53 of 56) 7286 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr3-4997 chr3 22780694 22780904 + 8.37 0.000 Intergenic L1M4a2|LINE|L1 421779 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr11-5962 chr11 17686226 17686436 + 8.37 0.000 Intergenic Intergenic 10608 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chrX-3633 chrX 94237277 94237487 + 8.37 0.000 Intergenic L1PBa1|LINE|L1 563176 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr2-7896 chr2 54997935 54998145 + 8.37 0.000 intron (NM_153828, intron 1 of 6) L1MB7|LINE|L1 12232 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr2-10156 chr2 80061641 80061851 + 8.37 0.000 intron (NM_001282598, intron 7 of 17) L2c|LINE|L2 -195163 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr3-11150 chr3 188947437 188947647 + 8.37 0.000 promoter-TSS (NR_046873) promoter-TSS (NR_046873) 97 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr2-11089 chr2 126775404 126775614 + 8.37 0.000 Intergenic L2b|LINE|L2 119351 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr16-4541 chr16 64882664 64882874 + 8.37 0.000 Intergenic Intergenic 239294 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr4-5700 chr4 31085459 31085669 + 8.37 0.000 intron (NM_001173523, intron 2 of 2) LTR8|LTR|ERV1 -85580 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA chr3-9505 chr3 51144639 51144849 + 8.37 0.000 intron (NM_004947, intron 9 of 52) L2b|LINE|L2 -240547 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr15-2183 chr15 85588141 85588351 + 8.37 0.000 intron (NM_007200, intron 8 of 36) intron (NM_007200, intron 8 of 36) -31704 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr5-5010 chr5 83180071 83180281 + 8.37 0.000 intron (NM_001318012, intron 3 of 7) intron (NM_001318012, intron 3 of 7) 102629 NM_001318012 7518 Hs.567359 NM_003401 ENSG00000152422 XRCC4 SSMED X-ray repair cross complementing 4 protein-coding chr8-3756 chr8 23263654 23263864 + 8.37 0.000 Intergenic Intergenic 17118 NM_001363183 91782 Hs.5019 NM_152272 ENSG00000147457 CHMP7 - charged multivesicular body protein 7 protein-coding chr8-6155 chr8 31374091 31374301 + 8.37 0.000 Intergenic L1PA15|LINE|L1 -265556 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr6-8100 chr6 126337550 126337760 + 8.37 0.000 Intergenic L2a|LINE|L2 -2134 NM_001012507 387103 Hs.486401 NM_001012507 ENSG00000203760 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding chr7-4715 chr7 48627783 48627993 + 8.37 0.000 intron (NM_152701, intron 59 of 61) MSTB2|LTR|ERVL-MaLR -296659 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr9-8916 chr9 137017975 137018185 + 8.37 0.000 intron (NM_212533, intron 14 of 48) CpG-29179 -9384 NM_207511 401563 Hs.522509 NM_207511 C9orf139 - chromosome 9 open reading frame 139 protein-coding chr3-10934 chr3 174230009 174230219 + 8.37 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -309318 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr5-3197 chr5 79868557 79868767 + 8.37 0.000 Intergenic L2|LINE|L2 -67917 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr4-7922 chr4 107654588 107654798 + 8.37 0.000 intron (NM_005443, intron 8 of 11) intron (NM_005443, intron 8 of 11) 65541 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr18-1170 chr18 20995510 20995720 + 8.37 0.000 intron (NM_005406, intron 16 of 32) L1M1|LINE|L1 116198 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr8-3854 chr8 32589170 32589380 + 8.37 0.000 intron (NM_013960, intron 1 of 12) intron (NM_013960, intron 1 of 12) -6551 NM_001159995 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr6-2765 chr6 129867850 129868060 + 8.37 0.000 Intergenic Intergenic -6640 NM_001010876 253582 NM_001010876 ENSG00000203756 TMEM244 C6orf191|bA174C7.4 transmembrane protein 244 protein-coding chr11-9969 chr11 77180543 77180753 + 8.37 0.000 intron (NM_001127180, intron 22 of 48) intron (NM_001127180, intron 22 of 48) 52402 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr19-3547 chr19 45171595 45171805 + 8.37 0.000 intron (NM_001270891, intron 1 of 5) HAL1ME|LINE|L1 6537 NM_001270893 79090 Hs.466929 NM_024108 ENSG00000007255 TRAPPC6A TRS33 trafficking protein particle complex 6A protein-coding chr2-11362 chr2 208186454 208186664 + 8.37 0.000 intron (NM_001099334, intron 2 of 8) intron (NM_001099334, intron 2 of 8) 3471 NM_001099334 389073 Hs.198416 NM_001099334 ENSG00000188674 C2orf80 GONDA1 chromosome 2 open reading frame 80 protein-coding chr10-3574 chr10 80416478 80416688 + 8.37 0.000 intron (NM_001243782, intron 1 of 5) intron (NM_001243782, intron 1 of 5) 2750 NM_001243782 84293 Hs.500333 NM_032333 ENSG00000122378 PRXL2A Adrx|C10orf58|FAM213A|PAMM peroxiredoxin like 2A protein-coding chr5-7263 chr5 12564785 12564995 + 8.37 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -9967 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA chr3-6056 chr3 50542394 50542604 + 8.37 0.000 Intergenic Intergenic 25248 NM_016210 51161 Hs.517860 NM_016210 ENSG00000088543 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding chr6-5684 chr6 110391005 110391215 + 8.37 0.000 TTS (NM_001368170) TTS (NM_001368170) 24465 NM_004032 8528 Hs.591348 NM_003649 ENSG00000203797 DDO DASOX|DDO-1|DDO-2 D-aspartate oxidase protein-coding chr17-6970 chr17 47813260 47813470 + 8.37 0.000 exon (NM_145798, exon 16 of 23) exon (NM_145798, exon 16 of 23) 8429 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding chrX-2077 chrX 21142206 21142416 + 8.37 0.000 Intergenic L1M2b|LINE|L1 -232107 NM_001330770 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr2-5425 chr2 113843008 113843218 + 8.37 0.000 intron (NR_110174, intron 3 of 4) intron (NR_110174, intron 3 of 4) -46821 NR_102318 10096 Hs.433512 NM_005721 ENSG00000115091 ACTR3 ARP3 actin related protein 3 protein-coding chr2-12349 chr2 50058149 50058359 + 8.37 0.000 intron (NM_001330093, intron 19 of 22) intron (NM_001330093, intron 19 of 22) -84051 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr1-10649 chr1 182337858 182338068 + 8.37 0.000 Intergenic Intergenic -23902 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr11-8922 chr11 17293301 17293511 + 8.37 0.000 intron (NM_001352661, intron 4 of 15) L1MB7|LINE|L1 16436 NM_001352671 4925 Hs.654599 NM_005013 ENSG00000070081 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding chr14-4190 chr14 88479446 88479656 + 8.37 0.000 exon (NM_007039, exon 13 of 19) exon (NM_007039, exon 13 of 19) 75456 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr4-7271 chr4 48404716 48404926 + 8.37 0.000 intron (NM_020846, intron 6 of 7) intron (NM_020846, intron 6 of 7) 63292 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr5-6268 chr5 99879785 99879995 + 8.37 0.000 Intergenic L1PREC2|LINE|L1 345900 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr1-15653 chr1 164469355 164469565 + 8.37 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -89900 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr16-4423 chr16 52269935 52270145 + 8.37 0.000 intron (NR_135281, intron 1 of 2) MamTip2|DNA|hAT-Tip100 11476 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA chr17-5844 chr17 67129012 67129222 + 8.37 0.000 intron (NM_001330447, intron 23 of 32) intron (NM_001330447, intron 23 of 32) 84563 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr13-1811 chr13 45354886 45355096 + 8.37 0.000 intron (NR_024458, intron 3 of 10) AluSx|SINE|Alu 13646 NR_024458 100190939 Hs.375766 NR_024458 TPT1-AS1 - TPT1 antisense RNA 1 ncRNA chr4-5738 chr4 54391109 54391319 + 8.37 0.000 Intergenic Intergenic 58322 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr10-8562 chr10 95130396 95130606 + 8.37 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -61004 NM_001198853 1558 Hs.709188 NM_000770 ENSG00000138115 CYP2C8 CPC8|CYP2C8DM|CYPIIC8|MP-12/MP-20 cytochrome P450 family 2 subfamily C member 8 protein-coding chr2-9594 chr2 241196863 241197073 + 8.37 0.000 TTS (NM_001001666) TTS (NM_001001666) 8291 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr3-5010 chr3 24756138 24756348 + 8.37 0.000 Intergenic Intergenic -73080 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr19-5764 chr19 22072717 22072927 + 8.37 0.000 exon (NM_033468, exon 2 of 4) exon (NM_033468, exon 2 of 4) 20338 NM_001316996 113835 Hs.283900 NM_033468 ENSG00000197134 ZNF257 BMZF-4|BMZF4 zinc finger protein 257 protein-coding chr8-3891 chr8 38495722 38495932 + 8.37 0.000 Intergenic MIRc|SINE|MIR -26993 NM_023110 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr15-4504 chr15 51869078 51869288 + 8.37 0.000 intron (NM_014547, intron 2 of 9) intron (NM_014547, intron 2 of 9) 39530 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chrX-3820 chrX 148028070 148028280 + 8.37 0.000 Intergenic L2a|LINE|L2 46838 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr1-15891 chr1 183421212 183421422 + 8.37 0.000 Intergenic L2a|LINE|L2 -2937 NM_015039 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr5-3928 chr5 176669391 176669601 + 8.37 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger 22012 NM_001366492 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr3-6454 chr3 105965562 105965772 + 8.37 0.000 Intergenic Intergenic -96266 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr2-9615 chr2 2809655 2809865 + 8.37 0.000 Intergenic Intergenic 316266 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr9-2383 chr9 126724292 126724502 + 8.37 0.000 Intergenic (GGCA)n|Simple_repeat|Simple_repeat -80609 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr17-8395 chr17 75383098 75383308 + 8.37 0.000 intron (NM_002086, intron 2 of 5) L4_A_Mam|LINE|RTE-X 22475 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr7-3745 chr7 73603295 73603505 + 8.37 0.000 intron (NM_032951, intron 7 of 16) intron (NM_032951, intron 7 of 16) 21122 NM_032954 51085 Hs.647055 NM_032951 ENSG00000009950 MLXIPL CHREBP|MIO|MLX|MONDOB|WBSCR14|WS-bHLH|bHLHd14 MLX interacting protein like protein-coding chr5-5481 chr5 139895144 139895354 + 8.37 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 99441 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr12-3868 chr12 110379201 110379411 + 8.37 0.000 intron (NM_001137664, intron 8 of 9) intron (NM_001137664, intron 8 of 9) 24424 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr10-6569 chr10 78204146 78204356 + 8.37 0.000 Intergenic MIR|SINE|MIR -44374 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA chr18-1630 chr18 51541624 51541834 + 8.37 0.000 intron (NR_040074, intron 1 of 2) MLT1F1|LTR|ERVL-MaLR 149687 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chrX-1816 chrX 96685701 96685911 + 8.37 0.000 intron (NM_007309, intron 1 of 26) intron (NM_007309, intron 1 of 26) 964 NM_006729 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr4-2526 chr4 43331868 43332078 + 8.37 0.000 Intergenic L2|LINE|L2 160570 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr13-936 chr13 93603129 93603339 + 8.37 0.000 intron (NM_005708, intron 2 of 8) AluJr|SINE|Alu 255239 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr21-1522 chr21 45029454 45029664 + 8.37 0.000 Intergenic Intergenic -24832 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr6-7528 chr6 68411558 68411768 + 8.37 0.000 Intergenic ERVL-E-int|LTR|ERVL -81764 NR_125854 101928280 Hs.544560 NR_125854 ENSG00000226497 LINC02549 - long intergenic non-protein coding RNA 2549 ncRNA chr3-3888 chr3 41853469 41853679 + 8.37 0.000 intron (NR_136342, intron 16 of 34) MER49|LTR|ERV1 108529 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr6-4141 chr6 167184489 167184699 + 8.37 0.000 Intergenic MIR|SINE|MIR 13975 NM_001145121 401285 NM_001013683 ENSG00000166984 TCP10L2 - t-complex 10 like 2 protein-coding chr22-3773 chr22 28382016 28382226 + 8.37 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -77748 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr1-10602 chr1 177083295 177083505 + 8.37 0.000 intron (NM_207108, intron 1 of 21) intron (NM_207108, intron 1 of 21) -53955 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr16-5511 chr16 19292034 19292244 + 8.37 0.000 intron (NM_001256720, intron 1 of 4) intron (NM_001256720, intron 1 of 4) 6408 NM_001256720 728276 Hs.632180 NM_001256720 ENSG00000261210 CLEC19A - C-type lectin domain containing 19A protein-coding chr11-4447 chr11 96220119 96220329 + 8.37 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -121214 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr8-2364 chr8 30317766 30317976 + 8.37 0.000 Intergenic L1ME4c|LINE|L1 -66630 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr6-4366 chr6 20680883 20681093 + 8.37 0.000 intron (NM_017774, intron 5 of 15) intron (NM_017774, intron 5 of 15) 146531 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr2-5017 chr2 229084431 229084641 + 8.37 0.000 intron (NM_001330157, intron 1 of 1) intron (NM_001330157, intron 1 of 1) 147556 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr5-8436 chr5 128762192 128762402 + 8.37 0.000 Intergenic Intergenic -202830 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr1-6669 chr1 50265292 50265502 + 8.37 0.000 Intergenic Intergenic 155564 NM_001324217 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding chr5-4868 chr5 65440389 65440599 + 8.37 0.000 intron (NR_135689, intron 7 of 25) L1MEc|LINE|L1 41426 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr2-6139 chr2 229271048 229271258 + 8.37 0.000 5' UTR (NM_001100818, exon 1 of 3) 5' UTR (NM_001100818, exon 1 of 3) 134 NM_001330157 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr20-2304 chr20 6375527 6375737 + 8.37 0.000 Intergenic L1PA17|LINE|L1 -51100 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr18-2904 chr18 11759252 11759462 + 8.37 0.000 intron (NM_001369387, intron 4 of 11) intron (NM_001369387, intron 4 of 11) 7272 NM_001369387 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr10-4961 chr10 28991394 28991604 + 8.37 0.000 Intergenic Intergenic 145091 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr4-3861 chr4 132014742 132014952 + 8.37 0.000 Intergenic AluSx1|SINE|Alu 250009 NR_125884 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr12-2532 chr12 98594506 98594716 + 8.37 0.000 intron (NM_213611, intron 1 of 6) intron (NM_213611, intron 1 of 6) 925 NM_213611 5250 Hs.290404 NM_002635 ENSG00000075415 SLC25A3 OK/SW-cl.48|PHC|PTP solute carrier family 25 member 3 protein-coding chr19-3809 chr19 5921232 5921442 + 8.37 0.000 intron (NM_003624, intron 13 of 16) intron (NM_003624, intron 13 of 16) 7083 NM_004058 828 Hs.584744 NM_004058 ENSG00000105519 CAPS CAPS1 calcyphosine protein-coding chr17-3741 chr17 28398543 28398753 + 8.37 0.000 3' UTR (NM_080669, exon 5 of 5) 3' UTR (NM_080669, exon 5 of 5) 7564 NM_001242366 113235 Hs.446689 NM_080669 ENSG00000076351 SLC46A1 G21|HCP1|PCFT solute carrier family 46 member 1 protein-coding chr10-3939 chr10 96022989 96023199 + 8.37 0.000 intron (NR_134321, intron 2 of 2) intron (NR_134321, intron 2 of 2) -20489 NM_001134375 54619 Hs.596479 NM_019084 ENSG00000107443 CCNJ bA690P14.1 cyclin J protein-coding chr15-3423 chr15 90079390 90079600 + 8.37 0.000 intron (NR_146321, intron 1 of 1) intron (NR_146321, intron 1 of 1) 2712 NR_146321 109729181 Hs.655249 NR_146321 ENSG00000259291 ZNF710-AS1 - ZNF710 antisense RNA 1 ncRNA chr17-4054 chr17 78132663 78132873 + 8.37 0.000 promoter-TSS (NM_007267) promoter-TSS (NM_007267) -341 NM_007267 11322 Hs.632227 NM_007267 ENSG00000141524 TMC6 EV1|EVER1|EVIN1|LAK-4P transmembrane channel like 6 protein-coding chr6-3604 chr6 97124709 97124919 + 8.37 0.000 intron (NM_052904, intron 7 of 10) intron (NM_052904, intron 7 of 10) 114738 NM_001323261 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chrX-3263 chrX 86121781 86121991 + 8.37 0.000 Intergenic L1PBa|LINE|L1 -26565 NM_001139514 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr1-7478 chr1 92095009 92095219 + 8.37 0.000 intron (NM_183242, intron 2 of 8) MER74A|LTR|ERVL 14769 NM_183242 284697 Hs.676102 NM_183242 ENSG00000189195 BTBD8 - BTB domain containing 8 protein-coding chr9-8854 chr9 135762157 135762367 + 8.37 0.000 intron (NM_001272003, intron 10 of 30) AluJo|SINE|Alu 60077 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr12-4990 chr12 78530153 78530363 + 8.37 0.000 Intergenic Intergenic -170512 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr19-6190 chr19 5212988 5213198 + 8.37 0.000 intron (NM_002850, intron 30 of 37) L2a|LINE|L2 127719 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr5-7341 chr5 17187538 17187748 + 8.37 0.000 intron (NR_027253, intron 1 of 2) intron (NR_027253, intron 1 of 2) -29180 NM_001271606 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr12-6049 chr12 112370199 112370409 + 8.37 0.000 intron (NM_001109662, intron 1 of 75) MLT1D|LTR|ERVL-MaLR 12127 NM_001109662 283450 Hs.530943 NM_173813 ENSG00000173064 HECTD4 C12ord51|C12orf51|HEEL|POTAGE HECT domain E3 ubiquitin protein ligase 4 protein-coding chr19-2089 chr19 48415616 48415826 + 8.37 0.000 intron (NM_000836, intron 6 of 12) intron (NM_000836, intron 6 of 12) 20846 NM_000836 2906 Hs.445015 NM_000836 ENSG00000105464 GRIN2D EB11|EIEE46|GluN2D|NMDAR2D|NR2D glutamate ionotropic receptor NMDA type subunit 2D protein-coding chr9-4273 chr9 101514602 101514812 + 8.37 0.000 Intergenic Intergenic -19146 NM_019592 56254 Hs.729085 NM_019592 ENSG00000155827 RNF20 BRE1|BRE1A|hBRE1 ring finger protein 20 protein-coding chr7-7485 chr7 98731158 98731368 + 8.37 0.000 Intergenic AluJr|SINE|Alu 113978 NM_002523 4885 Hs.3281 NM_002523 ENSG00000106236 NPTX2 NARP|NP-II|NP2 neuronal pentraxin 2 protein-coding chr2-5283 chr2 64067613 64067823 + 8.37 0.000 Intergenic Intergenic -48290 NM_001005739 51542 Hs.48499 NM_016516 ENSG00000143952 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L VPS54 subunit of GARP complex protein-coding chr14-1450 chr14 99565490 99565700 + 8.37 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 38612 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr7-3394 chr7 128420886 128421096 + 8.37 0.000 Intergenic Intergenic -11009 NM_001142576 3614 Hs.654401 NM_000883 ENSG00000106348 IMPDH1 IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608 inosine monophosphate dehydrogenase 1 protein-coding chr4-7653 chr4 85156133 85156343 + 8.37 0.000 Intergenic LTR16B1|LTR|ERVL 188754 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr5-4630 chr5 33642113 33642323 + 8.37 0.000 intron (NM_001324512, intron 10 of 21) Charlie10a|DNA|hAT-Charlie 201442 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr9-7126 chr9 131336361 131336571 + 8.37 0.000 Intergenic Intergenic 46743 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr2-10094 chr2 54306583 54306793 + 8.37 0.000 Intergenic MamGypLTR1b|LTR|Gypsy -24196 NM_001369403 129852 Hs.732626 NM_173486 ENSG00000177994 C2orf73 - chromosome 2 open reading frame 73 protein-coding chr12-4309 chr12 125052964 125053174 + 8.37 0.000 Intergenic Intergenic -12366 NM_001319840 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr22-1597 chr22 19109534 19109744 + 8.37 0.000 intron (NM_001184781, intron 1 of 9) L1MB2|LINE|L1 12773 NM_005137 9993 Hs.517357 NM_005137 ENSG00000070413 DGCR2 DGS-C|IDD|LAN|SEZ-12 DiGeorge syndrome critical region gene 2 protein-coding chr1-16514 chr1 230375510 230375720 + 8.37 0.000 intron (NM_001258311, intron 1 of 6) intron (NM_001258311, intron 1 of 6) 50717 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr16-3874 chr16 70520699 70520909 + 8.37 0.000 intron (NM_015386, intron 1 of 18) MIRb|SINE|MIR 2750 NM_001365426 25839 Hs.208680 NM_015386 ENSG00000103051 COG4 CDG2J|COD1|SWILS component of oligomeric golgi complex 4 protein-coding chr1-10998 chr1 217928130 217928340 + 8.37 0.000 Intergenic Intergenic 35335 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chr7-8151 chr7 28957359 28957569 + 8.37 0.000 exon (NM_014817, exon 1 of 1) exon (NM_014817, exon 1 of 1) 866 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr9-3155 chr9 112032808 112033018 + 8.37 0.000 Intergenic Intergenic 100813 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr10-4288 chr10 11624486 11624696 + 8.37 0.000 Intergenic AluSz6|SINE|Alu -12802 NR_125732 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr2-3865 chr2 37473084 37473294 + 8.37 0.000 Intergenic Intergenic 128559 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr14-4228 chr14 99341707 99341917 + 8.37 0.000 Intergenic Intergenic -69615 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr1-8231 chr1 27954076 27954286 + 8.37 0.000 intron (NM_001009568, intron 4 of 6) MIR|SINE|MIR -5281 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr3-4734 chr3 71254711 71254921 + 8.37 0.000 intron (NR_146142, intron 5 of 19) intron (NR_146142, intron 5 of 19) -9739 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr4-6165 chr4 39438336 39438546 + 8.37 0.000 intron (NM_175737, intron 3 of 4) intron (NM_175737, intron 3 of 4) 20507 NM_001024921 6133 Hs.412370 NM_000661 ENSG00000163682 RPL9 L9|NPC-A-16 ribosomal protein L9 protein-coding chr5-4792 chr5 56809531 56809741 + 8.37 0.000 Intergenic Intergenic -5913 NM_005921 4214 Hs.653654 NM_005921 ENSG00000095015 MAP3K1 MAPKKK1|MEKK|MEKK 1|MEKK1|SRXY6 mitogen-activated protein kinase kinase kinase 1 protein-coding chr9-4752 chr9 131928922 131929132 + 8.37 0.000 intron (NM_004269, intron 4 of 7) L1MA2|LINE|L1 150840 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr14-4966 chr14 75125638 75125848 + 8.37 0.000 intron (NM_001329238, intron 1 of 21) intron (NM_001329238, intron 1 of 21) 1305 NM_001329237 91754 Hs.7200 NM_033116 ENSG00000119638 NEK9 APUG|LCCS10|NC|NERCC|NERCC1 NIMA related kinase 9 protein-coding chr11-6144 chr11 41666478 41666688 + 8.37 0.000 Intergenic Intergenic -47985 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA chr17-3115 chr17 21166627 21166837 + 8.37 0.000 intron (NM_001330159, intron 1 of 6) intron (NM_001330159, intron 1 of 6) 545 NM_001330159 25979 Hs.386989 NM_015510 ENSG00000109016 DHRS7B CGI-93|SDR32C1 dehydrogenase/reductase 7B protein-coding chr4-2574 chr4 96403463 96403673 + 8.37 0.000 intron (NR_147149, intron 1 of 3) MLT1F1|LTR|ERVL-MaLR 92865 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr14-2381 chr14 41526210 41526420 + 8.37 0.000 Intergenic AluY|SINE|Alu -80541 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-7462 chr1 71256911 71257121 + 8.37 0.000 Intergenic Intergenic 175692 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr3-8760 chr3 2704999 2705209 + 8.37 0.000 intron (NM_175607, intron 4 of 24) intron (NM_175607, intron 4 of 24) -187111 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr15-5022 chr15 82132005 82132215 + 8.37 0.000 intron (NM_001040610, intron 17 of 17) intron (NM_001040610, intron 17 of 17) 43516 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr14-5428 chr14 104912361 104912571 + 8.37 0.000 Intergenic AluSx|SINE|Alu -12413 NM_138790 122618 Hs.407101 NM_138790 ENSG00000166428 PLD4 C14orf175 phospholipase D family member 4 protein-coding chr6-3437 chr6 135212469 135212679 + 8.37 0.000 intron (NR_134962, intron 14 of 14) intron (NR_134962, intron 14 of 14) -26586 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr20-3924 chr20 32860974 32861184 + 8.37 0.000 intron (NM_001143967, intron 1 of 26) intron (NM_001143967, intron 1 of 26) 2156 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr8-4178 chr8 80558737 80558947 + 8.37 0.000 Intergenic Intergenic 72616 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr5-8255 chr5 111616732 111616942 + 8.37 0.000 intron (NR_040093, intron 1 of 6) intron (NR_040093, intron 1 of 6) -104240 NR_131752 134429 Hs.93842 NM_139164 ENSG00000164211 STARD4 - StAR related lipid transfer domain containing 4 protein-coding chr6-5091 chr6 118713081 118713291 + 8.37 0.000 Intergenic Intergenic -3111 NM_001178035 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr14-4246 chr14 102348108 102348318 + 8.37 0.000 TTS (NM_001320046) TTS (NM_001320046) 14677 NM_032630 51550 Hs.129634 NM_032630 ENSG00000100865 CINP - cyclin dependent kinase 2 interacting protein protein-coding chr5-2269 chr5 35028251 35028461 + 8.37 0.000 intron (NM_031900, intron 7 of 13) intron (NM_031900, intron 7 of 13) 19593 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr12-5326 chr12 114139836 114140046 + 8.37 0.000 Intergenic LTR33|LTR|ERVL 101829 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr14-1302 chr14 32702503 32702713 + 8.37 0.000 intron (NM_004274, intron 9 of 13) intron (NM_004274, intron 9 of 13) -236271 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr4-5285 chr4 175897133 175897343 + 8.37 0.000 intron (NR_048571, intron 1 of 5) LTR33A_|LTR|ERVL -84124 NM_201591 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr7-8970 chr7 99454694 99454904 + 8.37 0.000 intron (NM_001318162, intron 7 of 7) intron (NM_001318162, intron 7 of 7) 11368 NM_001198879 100526740 NM_001198879 ENSG00000248919 ATP5MF-PTCD1 ATP5J2-PTCD1 ATP5MF-PTCD1 readthrough protein-coding chr2-10850 chr2 60400691 60400901 + 8.37 0.000 Intergenic Intergenic -9421 NR_132992 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr22-2276 chr22 32920074 32920284 + 8.37 0.000 intron (NM_003490, intron 4 of 13) intron (NM_003490, intron 4 of 13) 86642 NM_133633 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr21-975 chr21 46239273 46239483 + 8.37 0.000 intron (NM_003906, intron 26 of 27) L2a|LINE|L2 10147 NR_110566 114044 Hs.655095 NR_002776 ENSG00000215424 MCM3AP-AS1 C21orf85|MCM3AP-AS|MCM3APAS|MCM3APASB|NCRNA00031 MCM3AP antisense RNA 1 ncRNA chr10-4463 chr10 75617588 75617798 + 8.37 0.000 intron (NM_001305581, intron 2 of 6) L2a|LINE|L2 -29816 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr1-10528 chr1 169476866 169477076 + 8.37 0.000 intron (NM_001319667, intron 1 of 4) intron (NM_001319667, intron 1 of 4) 8973 NM_006996 10560 Hs.30246 NM_006996 ENSG00000117479 SLC19A2 TC1|THMD1|THT1|THTR1|TRMA solute carrier family 19 member 2 protein-coding chr8-3266 chr8 14000611 14000821 + 8.37 0.000 Intergenic L1PA13|LINE|L1 371026 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr9-4043 chr9 94716366 94716576 + 8.37 0.000 Intergenic L2c|LINE|L2 -10198 NM_032823 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr3-7765 chr3 68906553 68906763 + 8.37 0.000 intron (NM_001005527, intron 1 of 5) intron (NM_001005527, intron 1 of 5) 25889 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr10-3978 chr10 121096976 121097186 + 8.37 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 245719 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr5-6589 chr5 28103315 28103525 + 8.37 0.000 Intergenic Intergenic 184245 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr2-5950 chr2 36822802 36823012 + 8.37 0.000 Intergenic Intergenic 126200 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr18-2548 chr18 2139890 2140100 + 8.37 0.000 Intergenic L4_A_Mam|LINE|RTE-X 431510 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr2-9472 chr2 235400107 235400317 + 8.37 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -93831 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr19-7018 chr19 49807655 49807865 + 8.37 0.000 TTS (NM_014203) TTS (NM_014203) 5532 NR_033269 80199 Hs.288800 NM_025129 ENSG00000010361 FUZ CPLANE3|FY|NTD fuzzy planar cell polarity protein protein-coding chr5-8134 chr5 99332833 99333043 + 8.37 0.000 Intergenic Intergenic -201052 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr3-4120 chr3 114435762 114435972 + 8.37 0.000 intron (NM_001348805, intron 7 of 10) intron (NM_001348805, intron 7 of 10) -17726 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr10-4409 chr10 60367155 60367365 + 8.37 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 22615 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr11-5849 chr11 9206714 9206924 + 8.37 0.000 intron (NM_001348749, intron 1 of 21) intron (NM_001348749, intron 1 of 21) 58507 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr3-4526 chr3 119629334 119629544 + 8.37 0.000 exon (NM_001206961, exon 10 of 10) exon (NM_001206961, exon 10 of 10) 29168 NM_001293225 51365 Hs.437451 NM_015900 ENSG00000144837 PLA1A PS-PLA1|PSPLA1 phospholipase A1 member A protein-coding chrX-3989 chrX 15075222 15075432 + 8.37 0.000 Intergenic Intergenic 190036 NM_001177475 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr5-8501 chr5 133557559 133557769 + 8.37 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) 54877 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr5-7755 chr5 61245578 61245788 + 8.37 0.000 Intergenic Intergenic 19246 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr20-1778 chr20 54887166 54887376 + 8.37 0.000 Intergenic Intergenic 411678 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr9-7251 chr9 4375464 4375674 + 8.37 0.000 Intergenic Intergenic -75501 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr17-3402 chr17 3013034 3013244 + 8.37 0.000 intron (NM_001330058, intron 17 of 24) intron (NM_001330058, intron 17 of 24) -47244 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr19-6076 chr19 3046081 3046291 + 8.37 0.000 intron (NM_001144761, intron 1 of 19) MIR3|SINE|MIR 1449 NM_001144761 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chrX-2395 chrX 72243589 72243799 + 8.37 0.000 intron (NM_001170747, intron 3 of 3) intron (NM_001170747, intron 3 of 3) -4667 NM_001009954 54821 Hs.47558 NM_017669 ENSG00000186871 ERCC6L PICH|RAD26L ERCC excision repair 6 like, spindle assembly checkpoint helicase protein-coding chr4-7757 chr4 94122171 94122381 + 8.37 0.000 intron (NR_125922, intron 7 of 8) AluSq2|SINE|Alu 85280 NR_125922 101929210 Hs.518877 NR_125922 ENSG00000246541 LOC101929210 - uncharacterized LOC101929210 ncRNA chr8-5547 chr8 72476230 72476440 + 8.37 0.000 Intergenic L1PA17|LINE|L1 -60890 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr13-2068 chr13 59335556 59335766 + 8.37 0.000 Intergenic Intergenic -677057 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr1-14614 chr1 55041301 55041511 + 8.37 0.000 intron (NR_110451, intron 1 of 9) L3|LINE|CR1 1184 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr9-6122 chr9 15652667 15652877 + 8.37 0.000 intron (NM_001355547, intron 6 of 24) L1MB7|LINE|L1 88794 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr3-3950 chr3 50453780 50453990 + 8.37 0.000 intron (NM_001291101, intron 2 of 37) intron (NM_001291101, intron 2 of 37) 49749 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr11-6512 chr11 68877132 68877342 + 8.37 0.000 Intergenic AluSx|SINE|Alu 26595 NM_181514 219927 Hs.503047 NM_181512 ENSG00000197345 MRPL21 L21mt|MRP-L21 mitochondrial ribosomal protein L21 protein-coding chr16-3904 chr16 78750044 78750254 + 8.37 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 650495 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr3-10817 chr3 162850507 162850717 + 8.37 0.000 Intergenic L2a|LINE|L2 452689 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr18-1867 chr18 25698362 25698572 + 8.37 0.000 Intergenic Intergenic -346301 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr7-8588 chr7 66642742 66642952 + 8.37 0.000 3' UTR (NM_153033, exon 4 of 4) 3' UTR (NM_153033, exon 4 of 4) -11672 NR_110037 100996437 Hs.667408 NR_110037 LOC100996437 - uncharacterized LOC100996437 ncRNA chr8-5382 chr8 23379704 23379914 + 8.37 0.000 intron (NM_002318, intron 1 of 13) L1PA5|LINE|L1 24311 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chrX-4097 chrX 24119559 24119769 + 8.37 0.000 Intergenic AluJo|SINE|Alu -29318 NM_001330327 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr5-2751 chr5 141878237 141878447 + 8.37 0.000 promoter-TSS (NM_032420) promoter-TSS (NM_032420) 68 NM_032420 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr3-9494 chr3 50599280 50599490 + 8.37 0.000 Intergenic Intergenic 12389 NM_013324 1154 Hs.655334 NM_013324 ENSG00000114737 CISH BACTS2|CIS|CIS-1|G18|SOCS cytokine inducible SH2 containing protein protein-coding chrX-1615 chrX 110284392 110284602 + 8.37 0.000 intron (NM_001171689, intron 3 of 7) intron (NM_001171689, intron 3 of 7) 33588 NM_001025580 9949 Hs.656243 NM_015365 ENSG00000101935 AMMECR1 AMMERC1|MFHIEN Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding chr10-4846 chr10 14219508 14219718 + 8.37 0.000 intron (NR_134578, intron 2 of 3) MIRb|SINE|MIR 111271 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr11-8890 chr11 15178330 15178540 + 8.37 0.000 exon (NM_001031853, exon 5 of 13) exon (NM_001031853, exon 5 of 13) 29333 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr11-5119 chr11 125947686 125947896 + 8.37 0.000 exon (NM_001365077, exon 2 of 12) exon (NM_001365077, exon 2 of 12) 1735 NM_001365077 338667 Hs.730137 NM_001365077 VSIG10L2 - V-set and immunoglobulin domain containing 10 like 2 protein-coding chr12-5414 chr12 121908559 121908769 + 8.37 0.000 intron (NR_048555, intron 3 of 4) L2b|LINE|L2 -9928 NM_144668 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chrX-4504 chrX 65533046 65533256 + 8.37 0.000 intron (NM_001170650, intron 1 of 11) intron (NM_001170650, intron 1 of 11) 1655 NM_001170650 81887 Hs.522675 NM_031206 ENSG00000001497 LAS1L Las1-like|WTS|dJ475B7.2 LAS1 like, ribosome biogenesis factor protein-coding chr19-5852 chr19 43637709 43637919 + 8.37 0.000 intron (NM_145296, intron 1 of 8) intron (NM_145296, intron 1 of 8) 2036 NM_145296 199731 Hs.370984 NM_145296 ENSG00000105767 CADM4 IGSF4C|NECL4|Necl-4|TSLL2|synCAM4 cell adhesion molecule 4 protein-coding chr11-3426 chr11 45869175 45869385 + 8.37 0.000 intron (NM_001127457, intron 6 of 11) intron (NM_001127457, intron 6 of 11) -16371 NM_005456 9479 Hs.234249 NM_005456 ENSG00000121653 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding chr2-7031 chr2 152824213 152824423 + 8.37 0.000 Intergenic LTR87|LTR|ERVL? 105681 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr21-706 chr21 32050266 32050476 + 8.37 0.000 Intergenic Intergenic 35924 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr2-8850 chr2 174026510 174026720 + 8.37 0.000 non-coding (NR_136175, exon 1 of 1) non-coding (NR_136175, exon 1 of 1) 1335 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr12-5294 chr12 111180536 111180746 + 8.37 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 80637 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr6-7881 chr6 107588048 107588258 + 8.37 0.000 intron (NM_018013, intron 5 of 6) intron (NM_018013, intron 5 of 6) 98036 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr8-7333 chr8 134273752 134273962 + 8.25 0.000 Intergenic L2c|LINE|L2 -324214 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr19-4790 chr19 34066161 34066371 + 8.25 0.000 Intergenic L2|LINE|L2 -106238 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr20-2866 chr20 62539124 62539334 + 8.25 0.000 Intergenic Intergenic -11224 NM_178463 128826 Hs.86507 NM_178463 MIR1-1HG C20orf166|MIR133A2HG MIR1-1 host gene protein-coding chr14-5046 chr14 81076057 81076267 + 8.25 0.000 intron (NM_001142626, intron 3 of 8) L2b|LINE|L2 120541 NM_001142626 7253 Hs.160411 NM_000369 ENSG00000165409 TSHR CHNG1|LGR3|hTSHR-I thyroid stimulating hormone receptor protein-coding chr8-2493 chr8 144551940 144552150 + 8.25 0.000 intron (NM_025251, intron 3 of 10) intron (NM_025251, intron 3 of 10) -22934 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr10-8582 chr10 95974806 95975016 + 8.25 0.000 intron (NM_001349008, intron 17 of 34) L1MC1|LINE|L1 -25180 NM_001159747 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr14-2620 chr14 61344926 61345136 + 8.25 0.000 intron (NM_006255, intron 1 of 13) intron (NM_006255, intron 1 of 13) 23588 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr8-3587 chr8 136810531 136810741 + 8.25 0.000 intron (NR_147196, intron 4 of 5) L2c|LINE|L2 279838 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr2-12703 chr2 77972036 77972246 + 8.25 0.000 intron (NR_110288, intron 1 of 3) MER51A|LTR|ERV1 -17115 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA chr9-4128 chr9 135304786 135304996 + 8.25 0.000 Intergenic Intergenic -38358 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr8-3922 chr8 41928158 41928368 + 8.25 0.000 Intergenic Intergenic -31522 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr1-11165 chr1 238434248 238434458 + 8.25 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 51664 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr9-5408 chr9 94734254 94734464 + 8.25 0.000 intron (NM_001193331, intron 1 of 7) intron (NM_001193331, intron 1 of 7) 7660 NM_001193331 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr18-1939 chr18 35458357 35458567 + 8.25 0.000 Intergenic Intergenic 39146 NM_001308064 125476 Hs.464903 NM_194281 ENSG00000153391 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding chr13-1356 chr13 71809928 71810138 + 8.25 0.000 intron (NM_080759, intron 1 of 10) intron (NM_080759, intron 1 of 10) 57159 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr11-5398 chr11 66878886 66879096 + 8.25 0.000 intron (NM_001040716, intron 3 of 22) MIRb|SINE|MIR 21927 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chrX-4516 chrX 66200447 66200657 + 8.25 0.000 exon (NM_001367236, exon 12 of 21) exon (NM_001367236, exon 12 of 21) 32802 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr9-4185 chr9 32765054 32765264 + 8.25 0.000 Intergenic LTR16C|LTR|ERVL -18381 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr4-7423 chr4 66448483 66448693 + 8.25 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 171764 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chrX-2454 chrX 81877298 81877508 + 8.25 0.000 Intergenic L1MA3|LINE|L1 675301 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr12-4590 chr12 32148582 32148792 + 8.25 0.000 intron (NR_148725, intron 1 of 9) intron (NR_148725, intron 1 of 9) 41840 NM_001354189 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr10-5221 chr10 62940210 62940420 + 8.25 0.000 Intergenic MER3|DNA|hAT-Charlie -121148 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chr6-3633 chr6 126253523 126253733 + 8.25 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -86161 NM_001012507 387103 Hs.486401 NM_001012507 ENSG00000203760 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding chr4-8744 chr4 185801208 185801418 + 8.25 0.000 intron (NM_021069, intron 1 of 20) L1MA9|LINE|L1 9581 NM_001145672 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr8-3344 chr8 40043548 40043758 + 8.25 0.000 Intergenic Intergenic 108698 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr8-7270 chr8 130246899 130247109 + 8.25 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 49529 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr17-5474 chr17 40576250 40576460 + 8.25 0.000 Intergenic LTR33A|LTR|ERVL -10883 NM_001301714 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr13-2297 chr13 31363989 31364199 + 8.25 0.000 Intergenic Intergenic 164119 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr19-4777 chr19 32896875 32897085 + 8.25 0.000 intron (NM_032816, intron 16 of 18) L1MA4A|LINE|L1 -27213 NM_014270 11136 Hs.743345 NM_014270 ENSG00000021488 SLC7A9 BAT1|CSNU3 solute carrier family 7 member 9 protein-coding chr4-8629 chr4 173936056 173936266 + 8.25 0.000 Intergenic Intergenic 38888 NR_146487 101928478 NR_146487 ENSG00000250708 LINC02269 - long intergenic non-protein coding RNA 2269 ncRNA chrX-3082 chrX 128144472 128144682 + 8.25 0.000 Intergenic L1PB3|LINE|L1 -92174 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr6-2975 chr6 39644859 39645069 + 8.25 0.000 intron (NM_001289020, intron 3 of 21) MamTip2|DNA|hAT-Tip100 80444 NM_001289020 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr5-7561 chr5 39396820 39397030 + 8.25 0.000 intron (NM_001343, intron 1 of 14) LTR50|LTR|ERVL 28055 NM_001343 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB adaptor protein 2 protein-coding chr20-2782 chr20 54059897 54060107 + 8.25 0.000 promoter-TSS (NM_001323347) promoter-TSS (NM_001323347) -982 NM_001323347 8537 Hs.400556 NM_003657 ENSG00000064787 BCAS1 AIBC1|NABC1 breast carcinoma amplified sequence 1 protein-coding chr5-7177 chr5 5574021 5574231 + 8.25 0.000 Intergenic Intergenic 151449 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr8-2153 chr8 37004279 37004489 + 8.25 0.000 Intergenic Intergenic 220010 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr19-3533 chr19 43560686 43560896 + 8.25 0.000 intron (NM_006297, intron 3 of 16) intron (NM_006297, intron 3 of 16) 14787 NM_006297 7515 Hs.98493 NM_006297 ENSG00000073050 XRCC1 RCC|SCAR26 X-ray repair cross complementing 1 protein-coding chr11-4407 chr11 83257666 83257876 + 8.25 0.000 Intergenic Intergenic 28636 NM_001286117 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chrX-2969 chrX 19429298 19429508 + 8.25 0.000 intron (NM_001001671, intron 7 of 28) intron (NM_001001671, intron 7 of 28) 85476 NM_000284 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr3-9477 chr3 50228245 50228455 + 8.25 0.000 TTS (NR_106714) TTS (NR_106714) 914 NR_106714 102464817 NR_106714 ENSG00000275334 MIR5787 hsa-mir-5787 microRNA 5787 ncRNA chr3-9730 chr3 67542925 67543135 + 8.25 0.000 intron (NM_001177599, intron 2 of 10) L1P2|LINE|L1 111584 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr3-5495 chr3 193775820 193776030 + 8.25 0.000 Intergenic Intergenic 68084 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr11-4003 chr11 5605134 5605344 + 8.25 0.000 intron (NM_001003818, intron 3 of 7) intron (NM_001003818, intron 3 of 7) 8602 NM_001198644 117854 Hs.729048 NM_058166 ENSG00000121236 TRIM6 RNF89 tripartite motif containing 6 protein-coding chr2-8199 chr2 89676708 89676918 + 8.25 0.000 Intergenic L1PA15|LINE|L1 -38906 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr1-9376 chr1 30248214 30248424 + 8.25 0.000 Intergenic Intergenic -210707 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr17-5876 chr17 69141733 69141943 + 8.25 0.000 promoter-TSS (NM_080284) promoter-TSS (NM_080284) 57 NM_080284 23460 Hs.709514 NM_080284 ENSG00000154262 ABCA6 EST155051 ATP binding cassette subfamily A member 6 protein-coding chr1-16495 chr1 229644332 229644542 + 8.25 0.000 intron (NM_014777, intron 5 of 9) L2b|LINE|L2 18190 NM_014777 9816 Hs.533628 NM_014777 ENSG00000135763 URB2 KIAA0133|NET10|NPA2 URB2 ribosome biogenesis homolog protein-coding chr18-1835 chr18 22286664 22286874 + 8.25 0.000 Intergenic Intergenic 117332 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr5-9015 chr5 166178637 166178847 + 8.25 0.000 Intergenic Intergenic 747628 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr2-13038 chr2 108943073 108943283 + 8.25 0.000 intron (NM_022336, intron 1 of 11) intron (NM_022336, intron 1 of 11) 46042 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr6-6362 chr6 64358635 64358845 + 8.25 0.000 intron (NM_001292009, intron 29 of 43) intron (NM_001292009, intron 29 of 43) 551904 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr12-5851 chr12 48456754 48456964 + 8.25 0.000 Intergenic Kanga11a|DNA|TcMar-Tc2 -15806 NM_012404 23519 Hs.532658 NM_012404 ENSG00000139223 ANP32D PP32R2 acidic nuclear phosphoprotein 32 family member D protein-coding chr1-8416 chr1 87866053 87866263 + 8.25 0.000 Intergenic MLT2B2|LTR|ERVL -494503 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr16-2753 chr16 2703216 2703426 + 8.25 0.000 intron (NM_018992, intron 5 of 5) intron (NM_018992, intron 5 of 5) 16903 NM_001318395 83886 Hs.332878 NM_031948 ENSG00000172382 PRSS27 CAPH2|MPN serine protease 27 protein-coding chr8-4379 chr8 102598848 102599058 + 8.25 0.000 Intergenic Charlie15b|DNA|hAT-Charlie 47364 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr21-945 chr21 42778329 42778539 + 8.25 0.000 intron (NR_135517, intron 1 of 2) intron (NR_135517, intron 1 of 2) 1560 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr1-7729 chr1 29631553 29631763 + 8.25 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -281544 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr17-3488 chr17 48004909 48005119 + 8.25 0.000 Intergenic Intergenic -27868 NR_162100 113218499 NR_162100 MIR10226 - microRNA 10226 ncRNA chr2-7935 chr2 60549510 60549720 + 8.25 0.000 intron (NM_138559, intron 1 of 4) CpG 3883 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr22-1608 chr22 21963794 21964004 + 8.25 0.000 intron (NR_146277, intron 12 of 17) intron (NR_146277, intron 12 of 17) -11051 NM_014634 9647 Hs.112728 NM_014634 ENSG00000100034 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F protein-coding chr22-2001 chr22 27779823 27780033 + 8.25 0.000 intron (NM_002430, intron 1 of 1) intron (NM_002430, intron 1 of 1) 21828 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr8-3974 chr8 51230899 51231109 + 8.25 0.000 Intergenic LTR12C|LTR|ERV1 578441 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr2-7790 chr2 42854345 42854555 + 8.25 0.000 Intergenic Intergenic -61867 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr16-5773 chr16 87914803 87915013 + 8.25 0.000 intron (NM_001739, intron 2 of 6) intron (NM_001739, intron 2 of 6) 21621 NM_001367225 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr12-7422 chr12 59530686 59530896 + 8.25 0.000 Intergenic SATR1|Satellite|Satellite -65238 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr2-8865 chr2 175872675 175872885 + 8.25 0.000 Intergenic Intergenic 129487 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr10-3706 chr10 110748269 110748479 + 8.25 0.000 intron (NM_001134363, intron 1 of 13) intron (NM_001134363, intron 1 of 13) 104038 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr5-3951 chr5 3484511 3484721 + 8.25 0.000 intron (NR_033898, intron 2 of 4) (AC)n|Simple_repeat|Simple_repeat 19388 NR_104618 102467075 Hs.652949 NR_104618 ENSG00000250716 LINC01017 - long intergenic non-protein coding RNA 1017 ncRNA chr5-3557 chr5 53438882 53439092 + 8.25 0.000 Intergenic Intergenic -41642 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chrX-888 chrX 34042298 34042508 + 8.25 0.000 Intergenic L1PB4|LINE|L1 89927 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr16-2174 chr16 67883819 67884029 + 8.25 0.000 promoter-TSS (NM_001348682) promoter-TSS (NM_001348682) -961 NM_001348682 123904 Hs.435464 NM_198443 ENSG00000188038 NRN1L MRCC2446|UNQ2446|cpg15-2 neuritin 1 like protein-coding chr4-7403 chr4 64142521 64142731 + 8.25 0.000 Intergenic HERVK11-int|LTR|ERVK 266824 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr10-3667 chr10 101736344 101736554 + 8.25 0.000 Intergenic AluJb|SINE|Alu 39665 NM_033163 2253 Hs.57710 NM_006119 ENSG00000107831 FGF8 AIGF|FGF-8|HBGF-8|HH6|KAL6 fibroblast growth factor 8 protein-coding chr1-10003 chr1 85149004 85149214 + 8.25 0.000 Intergenic Intergenic 15315 NR_039619 100616481 NR_039619 ENSG00000266110 MIR4423 mir-4423 microRNA 4423 ncRNA chr17-5124 chr17 7205034 7205244 + 8.25 0.000 promoter-TSS (NM_001321077) promoter-TSS (NM_001321077) 48 NM_001321077 1742 Hs.463928 NM_001365 ENSG00000132535 DLG4 PSD95|SAP-90|SAP90 discs large MAGUK scaffold protein 4 protein-coding chr3-7496 chr3 156760577 156760787 + 8.25 0.000 intron (NR_038387, intron 1 of 2) intron (NR_038387, intron 1 of 2) 51339 NR_003284 647033 Hs.745109 NR_003284 PA2G4P4 PA2G4L1 proliferation-associated 2G4 pseudogene 4 pseudo chr13-2437 chr13 47822619 47822829 + 8.25 0.000 Intergenic Intergenic 109898 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr5-8952 chr5 159651551 159651761 + 8.25 0.000 Intergenic L2c|LINE|L2 -185380 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr1-15414 chr1 152059042 152059252 + 8.25 0.000 Intergenic Intergenic 21777 NM_001310142 100131107 NM_001310142 LOC100131107 - putative UPF0607 protein ENSP00000383783 protein-coding chr8-1673 chr8 38770855 38771065 + 8.25 0.000 intron (NM_001352804, intron 1 of 10) intron (NM_001352804, intron 1 of 10) 13685 NM_001352797 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr3-9492 chr3 50540959 50541169 + 8.25 0.000 Intergenic Intergenic 26683 NM_016210 51161 Hs.517860 NM_016210 ENSG00000088543 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding chr19-4037 chr19 5371723 5371933 + 8.25 0.000 Intergenic Intergenic -31016 NM_130854 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr15-4915 chr15 77618287 77618497 + 8.25 0.000 intron (NM_001301195, intron 3 of 3) intron (NM_001301195, intron 3 of 3) 14520 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr4-6203 chr4 52951127 52951337 + 8.25 0.000 intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 88915 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr15-3751 chr15 62284804 62285014 + 8.25 0.000 Intergenic Intergenic 19825 NR_107034 102465869 NR_107034 ENSG00000277919 MIR8067 hsa-mir-8067 microRNA 8067 ncRNA chr7-2679 chr7 15158514 15158724 + 8.25 0.000 Intergenic Intergenic -183761 NM_001350717 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr5-8245 chr5 110917659 110917869 + 8.25 0.000 Intergenic Intergenic -152316 NR_045089 85480 Hs.389874 NM_033035 ENSG00000145777 TSLP - thymic stromal lymphopoietin protein-coding chr10-5235 chr10 64522643 64522853 + 8.25 0.000 Intergenic Intergenic -302780 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr6-6996 chr6 20505826 20506036 + 8.25 0.000 Intergenic Intergenic -28526 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr2-14095 chr2 200112616 200112826 + 8.25 0.000 Intergenic Intergenic -157230 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr17-6058 chr17 79510537 79510747 + 8.25 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 5506 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr11-6138 chr11 40865152 40865362 + 8.25 0.000 intron (NM_020929, intron 1 of 4) L1MA8|LINE|L1 -572127 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr3-10843 chr3 165977674 165977884 + 8.25 0.000 Intergenic MIRc|SINE|MIR -140356 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr4-3111 chr4 161950097 161950307 + 8.25 0.000 intron (NM_001128428, intron 3 of 14) intron (NM_001128428, intron 3 of 14) -72531 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr13-3463 chr13 111897291 111897501 + 8.25 0.000 intron (NR_120401, intron 1 of 3) intron (NR_120401, intron 1 of 3) 3900 NR_120401 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr5-6897 chr5 132147651 132147861 + 8.25 0.000 Intergenic Intergenic -37120 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA chr18-2518 chr18 69908471 69908681 + 8.25 0.000 intron (NM_001303619, intron 1 of 4) L2c|LINE|L2 39297 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr17-6642 chr17 66445329 66445539 + 8.25 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -28580 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr1-12851 chr1 98638217 98638427 + 8.25 0.000 Intergenic L1M1|LINE|L1 -23399 NR_033716 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr12-4389 chr12 5713604 5713814 + 8.25 0.000 intron (NM_001278596, intron 15 of 25) intron (NM_001278596, intron 15 of 25) 219577 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr15-2293 chr15 64172729 64172939 + 8.25 0.000 intron (NM_022048, intron 11 of 11) intron (NM_022048, intron 11 of 11) -9679 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding chr4-7654 chr4 85216990 85217200 + 8.25 0.000 Intergenic MER11A|LTR|ERVK 249611 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr15-4431 chr15 45115893 45116103 + 8.25 0.000 intron (NM_207581, intron 2 of 5) intron (NM_207581, intron 2 of 5) 1672 NM_207581 405753 Hs.497987 NM_207581 ENSG00000140274 DUOXA2 SIMNIPHOM|TDH5 dual oxidase maturation factor 2 protein-coding chr2-9216 chr2 217738332 217738542 + 8.25 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 18156 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr8-4939 chr8 108056579 108056789 + 8.25 0.000 intron (NM_178565, intron 2 of 5) L2b|LINE|L2 25255 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr4-5984 chr4 182738342 182738552 + 8.25 0.000 exon (NM_001080477, exon 18 of 28) exon (NM_001080477, exon 18 of 28) 178806 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr20-1284 chr20 49054944 49055154 + 8.25 0.000 intron (NM_001362762, intron 1 of 24) MER46C|DNA|TcMar-Tigger 8737 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr9-8469 chr9 123521004 123521214 + 8.25 0.000 intron (NM_001352968, intron 12 of 18) intron (NM_001352968, intron 12 of 18) -35487 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr3-6752 chr3 140850339 140850549 + 8.25 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -91392 NM_001104647 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr16-4255 chr16 22964615 22964825 + 8.25 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 150558 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr5-2293 chr5 53151727 53151937 + 8.25 0.000 Intergenic Intergenic 41990 NR_104654 257396 Hs.12326 NR_034107 ENSG00000247796 LOC257396 - uncharacterized LOC257396 ncRNA chr15-2146 chr15 75105912 75106122 + 8.25 0.000 Intergenic AluSz|SINE|Alu 62731 NM_001301104 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chr5-4560 chr5 20982613 20982823 + 8.25 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -367183 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA chr5-6592 chr5 28942393 28942603 + 8.25 0.000 Intergenic L1MA3|LINE|L1 15628 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo chr17-8547 chr17 79686674 79686884 + 8.25 0.000 Intergenic Intergenic 20470 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chrX-3900 chrX 8149880 8150090 + 8.25 0.000 Intergenic Intergenic 21282 NM_016378 51480 Hs.279737 NM_016378 ENSG00000177504 VCX2 VCX-2r|VCX2R|VCXB variable charge X-linked 2 protein-coding chr13-3022 chr13 20827212 20827422 + 8.25 0.000 intron (NM_022459, intron 6 of 22) intron (NM_022459, intron 6 of 22) -53356 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chrX-4457 chrX 56922148 56922358 + 8.25 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 73288 NR_027139 169981 Hs.522672 NM_001010862 ENSG00000204271 SPIN3 SPIN-3|TDRD27|bA445O16.1 spindlin family member 3 protein-coding chr8-5122 chr8 67344199 67344409 + 8.25 0.000 promoter-TSS (NM_006421) promoter-TSS (NM_006421) 470 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr16-6357 chr16 50657344 50657554 + 8.25 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -11406 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr6-8232 chr6 136701386 136701596 + 8.25 0.000 intron (NM_005923, intron 3 of 29) intron (NM_005923, intron 3 of 29) 72377 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr3-8310 chr3 62439545 62439755 + 8.25 0.000 intron (NM_003716, intron 27 of 29) intron (NM_003716, intron 27 of 29) -66100 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr8-3559 chr8 127574744 127574954 + 8.25 0.000 Intergenic LTR16A1|LTR|ERVL -92710 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr9-5858 chr9 130653205 130653415 + 8.25 0.000 Intergenic AluJr|SINE|Alu -11284 NM_021619 59335 Hs.495311 NM_021619 ENSG00000130711 PRDM12 HSAN8|PFM9 PR/SET domain 12 protein-coding chr22-2489 chr22 22032280 22032490 + 8.25 0.000 intron (NR_135291, intron 1 of 6) intron (NR_135291, intron 1 of 6) 11549 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr12-7523 chr12 69313719 69313929 + 8.25 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -34530 NM_000239 4069 Hs.524579 NM_000239 ENSG00000090382 LYZ LYZF1|LZM lysozyme protein-coding chr11-5165 chr11 3740303 3740513 + 8.25 0.000 intron (NM_001365129, intron 11 of 31) AluSz|SINE|Alu 57138 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chrX-3775 chrX 132355274 132355484 + 8.25 0.000 intron (NR_110410, intron 2 of 2) L1MEg|LINE|L1 58196 NM_001170702 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr8-6204 chr8 36576022 36576232 + 8.25 0.000 Intergenic Intergenic -208247 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr20-1262 chr20 42037865 42038075 + 8.25 0.000 Intergenic MIR|SINE|MIR -419593 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr8-4195 chr8 82979314 82979524 + 8.25 0.000 Intergenic Intergenic 67315 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr6-5131 chr6 122513325 122513535 + 8.25 0.000 intron (NM_001270393, intron 3 of 7) intron (NM_001270393, intron 3 of 7) 41513 NM_181794 5570 Hs.741340 NM_032471 ENSG00000135549 PKIB PRKACN2 cAMP-dependent protein kinase inhibitor beta protein-coding chr21-835 chr21 45091628 45091838 + 8.25 0.000 intron (NM_001346688, intron 1 of 11) intron (NM_001346688, intron 1 of 11) 16682 NM_001346688 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr5-9040 chr5 169021966 169022176 + 8.25 0.000 intron (NR_109897, intron 1 of 4) intron (NR_109897, intron 1 of 4) 8844 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr5-2955 chr5 157680514 157680724 + 8.25 0.000 TTS (NM_001145132) TTS (NM_001145132) 9086 NM_001145132 100190949 Hs.720862 NM_001145132 ENSG00000187658 C5orf52 - chromosome 5 open reading frame 52 protein-coding chr4-8401 chr4 151878694 151878904 + 8.25 0.000 Intergenic Intergenic -117776 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr4-8130 chr4 127073605 127073815 + 8.25 0.000 Intergenic Intergenic -559247 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr1-9121 chr1 18020990 18021200 + 8.25 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -44562 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr5-4577 chr5 24920303 24920513 + 8.25 0.000 Intergenic L1PA5|LINE|L1 -79825 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA chr18-1578 chr18 35887483 35887693 + 8.25 0.000 Intergenic LTR33|LTR|ERVL 17338 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr3-3527 chr3 36821996 36822206 + 8.25 0.000 intron (NR_147141, intron 1 of 1) intron (NR_147141, intron 1 of 1) 399 NR_147141 105377031 Hs.333862 NR_147141 ENSG00000279727 LINC02033 - long intergenic non-protein coding RNA 2033 ncRNA chr20-4440 chr20 61666814 61667024 + 8.25 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 52829 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr1-6587 chr1 36175472 36175682 + 8.25 0.000 intron (NM_018067, intron 6 of 16) intron (NM_018067, intron 6 of 16) 19417 NM_018067 55700 Hs.356096 NM_018067 ENSG00000116871 MAP7D1 PARCC1|RPRC1 MAP7 domain containing 1 protein-coding chr7-8984 chr7 100291690 100291900 + 8.25 0.000 Intergenic Intergenic -15907 NM_001004351 441272 Hs.703626 NM_001004351 ENSG00000214300 SPDYE3 SPDYB2 speedy/RINGO cell cycle regulator family member E3 protein-coding chr13-4154 chr13 85525351 85525561 + 8.25 0.000 intron (NR_046989, intron 1 of 3) intron (NR_046989, intron 1 of 3) 161853 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr10-4433 chr10 69613290 69613500 + 8.25 0.000 Intergenic MLT2F|LTR|ERVL -16852 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr14-3617 chr14 56052561 56052771 + 8.25 0.000 Intergenic Intergenic -65745 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr4-2157 chr4 87251360 87251570 + 8.25 0.000 Intergenic Intergenic -30847 NR_120447 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr9-2825 chr9 125464027 125464237 + 8.25 0.000 intron (NM_001006619, intron 9 of 10) FLAM_A|SINE|Alu 202306 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr7-8824 chr7 85030881 85031091 + 8.25 0.000 intron (NM_152754, intron 10 of 16) intron (NM_152754, intron 10 of 16) 90945 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr9-7256 chr9 5173937 5174147 + 8.25 0.000 intron (NM_007179, intron 1 of 1) L2a|LINE|L2 11597 NM_007179 11172 Hs.632648 NM_007179 ENSG00000120210 INSL6 RIF1 insulin like 6 protein-coding chr18-1114 chr18 76588885 76589095 + 8.25 0.000 Intergenic Intergenic -30787 NR_120419 400660 Hs.131718 NR_120419 ENSG00000266256 LINC00683 - long intergenic non-protein coding RNA 683 ncRNA chr3-7862 chr3 125646691 125646901 + 8.25 0.000 Intergenic MER83|LTR|ERV1 -51299 NM_022776 114885 Hs.477440 NM_022776 ENSG00000144909 OSBPL11 ORP-11|ORP11|OSBP12|TCCCIA00292 oxysterol binding protein like 11 protein-coding chr6-5962 chr6 82453499 82453709 + 8.25 0.000 Intergenic AluJb|SINE|Alu 89360 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr11-10708 chr11 130601165 130601375 + 8.25 0.000 Intergenic Intergenic -65465 NR_107019 102466873 NR_107019 ENSG00000274999 MIR8052 hsa-mir-8052 microRNA 8052 ncRNA chr2-10489 chr2 222014850 222015060 + 8.25 0.000 Intergenic Intergenic -283192 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr7-6196 chr7 129966940 129967150 + 8.25 0.000 Intergenic AluSx|SINE|Alu -14085 NM_001202498 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr11-2374 chr11 134207588 134207798 + 8.25 0.000 intron (NM_015261, intron 7 of 34) AluSc|SINE|Alu 16839 NM_015261 23310 Hs.438550 NM_015261 ENSG00000151503 NCAPD3 CAP-D3|CAPD3|MCPH22|hCAP-D3|hHCP-6|hcp-6 non-SMC condensin II complex subunit D3 protein-coding chr3-3472 chr3 183031250 183031460 + 8.25 0.000 intron (NR_120640, intron 13 of 18) intron (NR_120640, intron 13 of 18) -45437 NM_001308101 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr5-5320 chr5 127482403 127482613 + 8.25 0.000 Intergenic Intergenic -35132 NM_001286808 133619 Hs.483259 NM_130809 ENSG00000164244 PRRC1 - proline rich coiled-coil 1 protein-coding chr17-6011 chr17 78205051 78205261 + 8.25 0.000 exon (NM_001010982, exon 7 of 11) exon (NM_001010982, exon 7 of 11) -9097 NM_001168 332 Hs.744872 NM_001168 ENSG00000089685 BIRC5 API4|EPR-1 baculoviral IAP repeat containing 5 protein-coding chr16-5846 chr16 1031155 1031365 + 8.25 0.000 Intergenic Intergenic -41496 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr4-1894 chr4 13544979 13545189 + 8.25 0.000 promoter-TSS (NM_001189) promoter-TSS (NM_001189) -576 NM_001189 579 Hs.590927 NM_001189 ENSG00000109705 NKX3-2 BAPX1|NKX3.2|NKX3B|SMMD NK3 homeobox 2 protein-coding chr5-5035 chr5 86819505 86819715 + 8.25 0.000 Intergenic MIR|SINE|MIR 72792 NR_105017 100505878 Hs.246405 NR_105017 LINC02059 - long intergenic non-protein coding RNA 2059 ncRNA chr12-6809 chr12 11986571 11986781 + 8.25 0.000 Intergenic L1MA8|LINE|L1 -63185 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr12-5172 chr12 103595517 103595727 + 8.25 0.000 intron (NM_017564, intron 3 of 68) intron (NM_017564, intron 3 of 68) 8349 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chr3-5693 chr3 14096782 14096992 + 8.25 0.000 Intergenic Intergenic 27983 NM_001098502 131474 Hs.517815 NM_144636 ENSG00000163528 CHCHD4 MIA40|TIMM40 coiled-coil-helix-coiled-coil-helix domain containing 4 protein-coding chr7-6792 chr7 26073389 26073599 + 8.25 0.000 Intergenic Intergenic -78704 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr16-3946 chr16 85925133 85925343 + 8.25 0.000 Intergenic Intergenic 6891 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr9-4999 chr9 22465511 22465721 + 8.25 0.000 Intergenic THE1D|LTR|ERVL-MaLR 18792 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr1-9485 chr1 36797957 36798167 + 8.25 0.000 3' UTR (NM_000831, exon 16 of 16) 3' UTR (NM_000831, exon 16 of 16) 236453 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr1-6098 chr1 121097167 121097377 + 8.25 0.000 TTS (NR_045213) TTS (NR_045213) 993 NR_158169 100996318 NR_158169 LOC100996318 - uncharacterized LOC100996318 ncRNA chr1-5415 chr1 21723260 21723470 + 8.25 0.000 intron (NM_001350164, intron 11 of 25) AluSz|SINE|Alu -54008 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr9-8473 chr9 123851939 123852149 + 8.25 0.000 intron (NM_001352968, intron 2 of 18) MLT1F-int|LTR|ERVL-MaLR 78082 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr5-8961 chr5 160497996 160498206 + 8.25 0.000 Intergenic AluJb|SINE|Alu 12749 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr10-6312 chr10 104053568 104053778 + 8.25 0.000 intron (NM_000494, intron 22 of 55) L2a|LINE|L2 -5487 NR_030760 100126326 NR_030760 ENSG00000283788 MIR936 MIRN936|hsa-mir-936 microRNA 936 ncRNA chr16-4418 chr16 51637951 51638161 + 8.25 0.000 Intergenic Intergenic -124463 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr2-4065 chr2 120908528 120908738 + 8.25 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 116352 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr22-2404 chr22 17436804 17437014 + 8.25 0.000 intron (NM_001290047, intron 1 of 18) intron (NM_001290047, intron 1 of 18) 67449 NM_001290047 27443 Hs.231895 NM_031413 ENSG00000099954 CECR2 - CECR2 histone acetyl-lysine reader protein-coding chrX-2622 chrX 108726954 108727164 + 8.25 0.000 Intergenic Intergenic 9318 NM_003604 8471 Hs.407141 NM_003604 ENSG00000133124 IRS4 IRS-4|PY160 insulin receptor substrate 4 protein-coding chr4-6180 chr4 42140896 42141106 + 8.25 0.000 intron (NM_207406, intron 3 of 5) intron (NM_207406, intron 3 of 5) 11654 NM_001159547 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr7-3664 chr7 45145917 45146127 + 8.25 0.000 Intergenic Intergenic -11769 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr19-4542 chr19 9864772 9864982 + 8.25 0.000 intron (NM_058164, intron 1 of 5) AluJo|SINE|Alu -6702 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr17-6338 chr17 67633839 67634049 + 8.25 0.000 intron (NM_181671, intron 6 of 9) intron (NM_181671, intron 6 of 9) -83889 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr14-5364 chr14 103299510 103299720 + 8.25 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -17669 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr5-4905 chr5 69074209 69074419 + 8.25 0.000 Intergenic Intergenic -19700 NM_022902 64924 Hs.631975 NM_022902 ENSG00000145740 SLC30A5 ZNT5|ZNTL1|ZTL1|ZnT-5 solute carrier family 30 member 5 protein-coding chr17-7321 chr17 5135025 5135235 + 8.25 0.000 intron (NM_004505, intron 7 of 29) intron (NM_004505, intron 7 of 29) 6738 NM_004505 9098 Hs.448851 NM_004505 ENSG00000129204 USP6 HRP1|TRE17|TRE2|TRESMCR|Tre-2|USP6-short ubiquitin specific peptidase 6 protein-coding chr7-4990 chr7 155594072 155594282 + 8.25 0.000 Intergenic LTR88b|LTR|Gypsy? -23431 NM_001369813 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr6-2842 chr6 902205 902415 + 8.25 0.000 Intergenic Intergenic 33812 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr17-7545 chr17 18850299 18850509 + 8.25 0.000 Intergenic Intergenic -5895 NM_001243942 5636 Hs.632236 NM_002767 ENSG00000141127 PRPSAP2 PAP41 phosphoribosyl pyrophosphate synthetase associated protein 2 protein-coding chr17-5591 chr17 47742558 47742768 + 8.25 0.000 exon (NM_013351, exon 2 of 6) exon (NM_013351, exon 2 of 6) 9427 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr1-4810 chr1 20723805 20724015 + 8.25 0.000 intron (NM_001103161, intron 7 of 9) intron (NM_001103161, intron 7 of 9) -5903 NM_001122819 57576 Hs.130411 NM_020816 ENSG00000117245 KIF17 KIF17B|KIF3X|KLP-2|OSM-3 kinesin family member 17 protein-coding chr1-10547 chr1 171684165 171684375 + 8.25 0.000 Intergenic Intergenic -31582 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr19-4477 chr19 5569329 5569539 + 8.25 0.000 Intergenic AluSp|SINE|Alu -1400 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chrX-5292 chrX 141985010 141985220 + 8.25 0.000 Intergenic THE1D|LTR|ERVL-MaLR 81221 NM_005462 9947 Hs.132194 NM_005462 ENSG00000155495 MAGEC1 CT7|CT7.1 MAGE family member C1 protein-coding chr2-5257 chr2 57371155 57371365 + 8.25 0.000 Intergenic MER85|DNA|PiggyBac -536391 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr9-8384 chr9 118577172 118577382 + 8.25 0.000 Intergenic L1ME2|LINE|L1 -102394 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr10-3786 chr10 126781313 126781523 + 8.25 0.000 Intergenic Intergenic -110908 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr12-5279 chr12 110408299 110408509 + 8.25 0.000 Intergenic HERVH-int|LTR|ERV1 -4674 NM_016238 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr1-4275 chr1 9442335 9442545 + 8.25 0.000 Intergenic Intergenic -13444 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr10-2394 chr10 117511899 117512109 + 8.25 0.000 intron (NR_002791, intron 2 of 3) intron (NR_002791, intron 2 of 3) -30441 NM_001165924 2018 Hs.202095 NM_004098 ENSG00000170370 EMX2 - empty spiracles homeobox 2 protein-coding chr2-11185 chr2 154169221 154169431 + 8.25 0.000 intron (NM_052917, intron 4 of 12) intron (NM_052917, intron 4 of 12) 224932 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr3-5957 chr3 46390215 46390425 + 8.25 0.000 intron (NR_125406, intron 2 of 3) HERVH-int|LTR|ERV1 16739 NR_125406 102724297 Hs.622021 NR_125406 LOC102724297 - uncharacterized LOC102724297 ncRNA chr10-7626 chr10 22769198 22769408 + 8.25 0.000 Intergenic MSTC|LTR|ERVL-MaLR -54725 NM_005028 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr10-4211 chr10 116269190 116269400 + 8.25 0.000 intron (NM_005264, intron 4 of 10) intron (NM_005264, intron 4 of 10) 2930 NM_145793 2674 Hs.388347 NM_005264 ENSG00000151892 GFRA1 GDNFR|GDNFRA|GFR-ALPHA-1|RET1L|RETL1|TRNR1 GDNF family receptor alpha 1 protein-coding chr1-5686 chr1 46722145 46722355 + 8.25 0.000 Intergenic Intergenic -3136 NM_014774 9813 Hs.707688 NM_014774 ENSG00000159658 EFCAB14 KIAA0494 EF-hand calcium binding domain 14 protein-coding chr12-3109 chr12 26164041 26164251 + 8.25 0.000 Intergenic Intergenic -31190 NM_001135823 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr8-2995 chr8 102064305 102064515 + 8.25 0.000 intron (NM_001040624, intron 1 of 7) intron (NM_001040624, intron 1 of 7) 59924 NM_001040624 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr10-5616 chr10 94490881 94491091 + 8.25 0.000 intron (NM_015188, intron 3 of 12) L1MEc|LINE|L1 -54781 NM_001289070 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding chr1-8579 chr1 175782870 175783080 + 8.25 0.000 Intergenic Intergenic -39380 NM_001328635 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chrX-3482 chrX 37495909 37496119 + 8.25 0.000 Intergenic Intergenic -75647 NM_198511 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chrX-3879 chrX 5168933 5169143 + 8.25 0.000 Intergenic Intergenic -535466 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr2-8403 chr2 115154420 115154630 + 8.25 0.000 intron (NR_036580, intron 1 of 2) LTR89|LTR|ERVL? 6818 NR_036580 389023 Hs.97540 NR_036580 ENSG00000235026 DPP10-AS1 - DPP10 antisense RNA 1 ncRNA chr22-805 chr22 29183940 29184150 + 8.25 0.000 Intergenic AluJb|SINE|Alu -21851 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr4-5192 chr4 159721157 159721367 + 8.25 0.000 intron (NR_146278, intron 2 of 2) Tigger3b|DNA|TcMar-Tigger 56522 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr3-4851 chr3 156098771 156098981 + 8.25 0.000 Intergenic FordPrefect_a|DNA|hAT-Tip100 -21672 NM_001308217 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr20-2017 chr20 62017183 62017393 + 8.25 0.000 intron (NM_003185, intron 1 of 14) intron (NM_003185, intron 1 of 14) -47514 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr12-8064 chr12 116390052 116390262 + 8.25 0.000 Intergenic Intergenic 38161 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chrX-4873 chrX 106035708 106035918 + 8.25 0.000 intron (NM_000354, intron 2 of 4) intron (NM_000354, intron 2 of 4) 2914 NM_000354 6906 Hs.76838 NM_000354 ENSG00000123561 SERPINA7 TBG|TBGQTL serpin family A member 7 protein-coding chr2-8133 chr2 81032734 81032944 + 8.25 0.000 Intergenic L1M1|LINE|L1 434107 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr10-5227 chr10 64009334 64009544 + 8.25 0.000 Intergenic L2c|LINE|L2 -487549 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr6-4700 chr6 56348832 56349042 + 8.25 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) 45191 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr10-8799 chr10 107543056 107543266 + 8.25 0.000 Intergenic Intergenic -378455 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr2-8045 chr2 71743461 71743671 + 8.25 0.000 Intergenic Intergenic 276867 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr18-3583 chr18 80069683 80069893 + 8.25 0.000 intron (NR_103445, intron 1 of 3) intron (NR_103445, intron 1 of 3) 2532 NR_103445 100506070 Hs.593610 NR_103445 ENSG00000261126 RBFADN - RBFA downstream neighbor ncRNA chr3-4362 chr3 185488528 185488738 + 8.25 0.000 TTS (NM_080652) TTS (NM_080652) 10402 NM_080652 90407 Hs.677570 NM_080652 ENSG00000163900 TMEM41A 2900010K02Rik transmembrane protein 41A protein-coding chr11-6988 chr11 116647969 116648179 + 8.25 0.000 intron (NR_135069, intron 1 of 2) intron (NR_135069, intron 1 of 2) 8652 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr18-2296 chr18 78152785 78152995 + 8.25 0.000 Intergenic Intergenic -159163 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr2-12689 chr2 76316207 76316417 + 8.25 0.000 Intergenic Intergenic -605397 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr8-2587 chr8 47992931 47993141 + 8.25 0.000 Intergenic HERVFH21-int|LTR|ERV1 -15395 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr9-4292 chr9 116845055 116845265 + 8.25 0.000 intron (NM_014010, intron 10 of 21) AluY|SINE|Alu 157855 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr2-10949 chr2 82703669 82703879 + 8.25 0.000 Intergenic Intergenic -153029 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr2-11660 chr2 7188179 7188389 + 8.25 0.000 Intergenic Intergenic -110404 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr7-7041 chr7 137639828 137640038 + 8.25 0.000 intron (NM_001321710, intron 6 of 32) L1MA10|LINE|L1 206399 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr3-5381 chr3 151379391 151379601 + 8.25 0.000 intron (NM_053002, intron 29 of 42) intron (NM_053002, intron 29 of 42) 5316 NM_022788 64805 Hs.591281 NM_022788 ENSG00000169313 P2RY12 ADPG-R|BDPLT8|HORK3|P2T(AC)|P2Y(12)R|P2Y(AC)|P2Y(ADP)|P2Y(cyc)|P2Y12|SP1999 purinergic receptor P2Y12 protein-coding chr8-4118 chr8 72679234 72679444 + 8.25 0.000 intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) -52706 NR_110656 101926908 Hs.680588 NR_110656 ENSG00000253726 LOC101926908 - uncharacterized LOC101926908 ncRNA chr6-6834 chr6 7433560 7433770 + 8.25 0.000 Intergenic AluSx|SINE|Alu 43836 NM_001348194 83732 Hs.437474 NM_031480 ENSG00000124784 RIOK1 AD034|RIO1|RRP10|bA288G3.1 RIO kinase 1 protein-coding chr2-12026 chr2 29071924 29072134 + 8.25 0.000 exon (NM_001029883, exon 1 of 2) exon (NM_001029883, exon 1 of 2) 2494 NM_001029883 388939 Hs.354243 NM_001029883 ENSG00000179270 PCARE C2orf71|RP54 photoreceptor cilium actin regulator protein-coding chr4-7681 chr4 87520583 87520793 + 8.25 0.000 intron (NM_001128310, intron 1 of 11) LTR84a|LTR|ERVL 8815 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr11-3353 chr11 121716144 121716354 + 8.25 0.000 Intergenic Intergenic 263935 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr11-8384 chr11 92104792 92105002 + 8.25 0.000 Intergenic Intergenic -120137 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr20-2777 chr20 53236104 53236314 + 8.25 0.000 intron (NM_001193421, intron 1 of 2) intron (NM_001193421, intron 1 of 2) 50926 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr2-14606 chr2 233535282 233535492 + 8.25 0.000 intron (NM_001365479, intron 10 of 31) MER58C|DNA|hAT-Charlie 30186 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr16-3009 chr16 30005597 30005807 + 8.25 0.000 TTS (NR_134855) TTS (NR_134855) 5325 NR_104090 8448 Hs.355281 NM_003586 ENSG00000149927 DOC2A Doc2 double C2 domain alpha protein-coding chr5-9017 chr5 166759726 166759936 + 8.25 0.000 Intergenic (CTCT)n|Simple_repeat|Simple_repeat 166539 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr6-2171 chr6 27168637 27168847 + 8.25 0.000 Intergenic MSTB|LTR|ERVL-MaLR 21116 NR_036096 100422934 NR_036096 ENSG00000265565 MIR3143 mir-3143 microRNA 3143 ncRNA chr2-13452 chr2 145051375 145051585 + 8.25 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 383513 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr14-2133 chr14 77023489 77023699 + 8.25 0.000 TTS (NM_024496) TTS (NM_024496) 5114 NM_024496 64207 Hs.179260 NM_024496 ENSG00000119669 IRF2BPL C14orf4|EAP1|NEDAMSS interferon regulatory factor 2 binding protein like protein-coding chr17-5724 chr17 57653447 57653657 + 8.25 0.000 intron (NM_138962, intron 11 of 13) intron (NM_138962, intron 11 of 13) -45140 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA chr9-2629 chr9 21153824 21154034 + 8.25 0.000 Intergenic Intergenic -12028 NM_002177 3467 Hs.73010 NM_002177 ENSG00000177047 IFNW1 - interferon omega 1 protein-coding chr9-7730 chr9 74126128 74126338 + 8.25 0.000 Intergenic Intergenic -245298 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr5-4759 chr5 53028029 53028239 + 8.25 0.000 intron (NR_073106, intron 2 of 29) intron (NR_073106, intron 2 of 29) 38782 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr1-5949 chr1 27330455 27330665 + 8.25 0.000 intron (NM_032125, intron 1 of 5) L1ME3|LINE|L1 6686 NR_033926 644961 Hs.660887 NR_033926 ACTG1P20 - actin gamma 1 pseudogene 20 pseudo chr11-6581 chr11 72337871 72338081 + 8.25 0.000 intron (NM_030813, intron 6 of 16) intron (NM_030813, intron 6 of 16) -93800 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr21-828 chr21 42847504 42847714 + 8.25 0.000 intron (NM_033661, intron 11 of 11) MER58B|DNA|hAT-Charlie 31666 NM_001260477 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr2-9859 chr2 183032938 183033148 + 8.25 0.000 intron (NM_205842, intron 1 of 31) AluJb|SINE|Alu 5414 NM_013436 10787 Hs.603732 NM_013436 ENSG00000061676 NCKAP1 HEM2|NAP1|NAP125|p125Nap1 NCK associated protein 1 protein-coding chr1-11899 chr1 51139704 51139914 + 8.25 0.000 intron (NM_001136508, intron 3 of 4) MLT1I|LTR|ERVL-MaLR 37581 NM_001136508 284546 Hs.176177 NM_001136508 ENSG00000204006 C1orf185 - chromosome 1 open reading frame 185 protein-coding chrX-3028 chrX 74767046 74767256 + 8.25 0.000 intron (NM_001008537, intron 1 of 3) L1PREC2|LINE|L1 -152527 NM_183353 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr1-15779 chr1 175307289 175307499 + 8.25 0.000 Intergenic Intergenic -114407 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr20-1668 chr20 33090775 33090985 + 8.25 0.000 intron (NM_182519, intron 8 of 15) intron (NM_182519, intron 8 of 15) 9368 NM_182519 149954 Hs.38961 NM_182519 ENSG00000186191 BPIFB4 C20orf186|LPLUNC4|RY2G5|dJ726C3.5 BPI fold containing family B member 4 protein-coding chr10-5428 chr10 77562952 77563162 + 8.25 0.000 intron (NM_001271519, intron 1 of 28) MER131|DNA?|DNA? 74751 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr17-7834 chr17 41559572 41559782 + 8.25 0.000 Intergenic LTR67B|LTR|ERVL -5182 NR_038442 147093 Hs.680576 NR_038442 ENSG00000226629 LINC00974 - long intergenic non-protein coding RNA 974 ncRNA chr13-2103 chr13 83277140 83277350 + 8.25 0.000 Intergenic MADE1|DNA|TcMar-Mariner 605148 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr13-3355 chr13 75480477 75480687 + 8.25 0.000 intron (NM_001286658, intron 1 of 19) intron (NM_001286658, intron 1 of 19) 1586 NM_001286658 9882 Hs.210891 NM_014832 ENSG00000136111 TBC1D4 AS160|NIDDM5 TBC1 domain family member 4 protein-coding chr11-9325 chr11 46036944 46037154 + 8.25 0.000 intron (NR_147890, intron 5 of 18) L1M5|LINE|L1 83770 NM_001352029 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr4-2640 chr4 165505990 165506200 + 8.25 0.000 Intergenic Intergenic 119853 NR_030304 693163 NR_030304 ENSG00000207559 MIR578 MIRN578|hsa-mir-578 microRNA 578 ncRNA chr1-3887 chr1 54081729 54081939 + 8.25 0.000 intron (NM_153035, intron 3 of 4) intron (NM_153035, intron 3 of 4) 27755 NR_039942 100616315 NR_039942 ENSG00000283749 MIR4781 mir-4781 microRNA 4781 ncRNA chr14-3096 chr14 64639317 64639527 + 8.25 0.000 Intergenic MER41A|LTR|ERV1 -65002 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr13-2260 chr13 27014763 27014973 + 8.25 0.000 Intergenic Intergenic -110665 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr3-6404 chr3 99250274 99250484 + 8.25 0.000 Intergenic Intergenic -348684 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr17-3685 chr17 13996228 13996438 + 8.25 0.000 Intergenic Intergenic -28165 NR_003261 94158 Hs.633073 NR_003261 CDRT15P1 CDRT15P CMT1A duplicated region transcript 15 pseudogene 1 pseudo chr2-13268 chr2 127439508 127439718 + 8.25 0.000 Intergenic Intergenic -15995 NR_039944 100616187 NR_039944 ENSG00000264075 MIR4783 - microRNA 4783 ncRNA chr13-2499 chr13 52866704 52866914 + 8.25 0.000 Intergenic MIRb|SINE|MIR -18169 NM_002590 5100 Hs.19492 NM_002590 ENSG00000136099 PCDH8 ARCADLIN|PAPC protocadherin 8 protein-coding chrX-1393 chrX 154412687 154412897 + 8.25 0.000 promoter-TSS (NM_001009933) promoter-TSS (NM_001009933) -691 NM_001009933 1774 Hs.401929 NM_006730 ENSG00000013563 DNASE1L1 DNAS1L1|DNASEX|DNL1L|G4.8|XIB deoxyribonuclease 1 like 1 protein-coding chr3-4846 chr3 153956094 153956304 + 8.25 0.000 Intergenic Intergenic -164804 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr13-2982 chr13 85116167 85116377 + 8.25 0.000 intron (NR_126383, intron 1 of 5) intron (NR_126383, intron 1 of 5) 31785 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr8-5738 chr8 138579430 138579640 + 8.25 0.000 Intergenic AluJo|SINE|Alu -81805 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr7-8212 chr7 32161769 32161979 + 8.25 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -90438 NM_001322057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr1-8141 chr1 11885893 11886103 + 8.25 0.000 Intergenic Intergenic -22156 NR_002754 26829 NR_002754 ENSG00000199347 RNU5E-1 RNU5E|U5E RNA, U5E small nuclear 1 snRNA chr1-9954 chr1 78716255 78716465 + 8.25 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 66529 NM_006417 10561 Hs.82316 NM_006417 ENSG00000137965 IFI44 MTAP44|TLDC5|p44 interferon induced protein 44 protein-coding chr1-12865 chr1 103570814 103571024 + 8.25 0.000 non-coding (NR_024438, exon 1 of 1) non-coding (NR_024438, exon 1 of 1) 1515 NR_024438 648740 Hs.721681 NR_024438 ACTG1P4 ACTGP4 actin gamma 1 pseudogene 4 pseudo chr8-5392 chr8 25843219 25843429 + 8.25 0.000 3' UTR (NM_022659, exon 16 of 16) 3' UTR (NM_022659, exon 16 of 16) 202089 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr5-4917 chr5 73343162 73343372 + 8.25 0.000 Intergenic Intergenic 5361 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr10-8387 chr10 82067897 82068107 + 8.25 0.000 intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 164918 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr4-5807 chr4 85521246 85521456 + 8.25 0.000 intron (NM_001025616, intron 1 of 9) intron (NM_001025616, intron 1 of 9) 46201 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr4-3244 chr4 77819127 77819337 + 8.25 0.000 promoter-TSS (NM_001365007) promoter-TSS (NM_001365007) 136 NM_001286790 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr3-10027 chr3 102908823 102909033 + 8.25 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 473913 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr22-4317 chr22 50386211 50386421 + 8.25 0.000 intron (NM_001242899, intron 2 of 22) AluSx1|SINE|Alu -21126 NR_162128 113218480 NR_162128 MIR12114 - microRNA 12114 ncRNA chr9-8008 chr9 94256282 94256492 + 8.25 0.000 intron (NR_160773, intron 1 of 2) intron (NR_160773, intron 1 of 2) -2879 NM_003448 169841 Hs.387623 NM_003448 ENSG00000175787 ZNF169 - zinc finger protein 169 protein-coding chr4-4600 chr4 76802732 76802942 + 8.25 0.000 Intergenic Intergenic 95307 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr11-8348 chr11 78947311 78947521 + 8.25 0.000 intron (NM_001098816, intron 6 of 33) intron (NM_001098816, intron 6 of 33) -372552 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr1-9772 chr1 55867302 55867512 + 8.25 0.000 Intergenic Intergenic 77556 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr16-4967 chr16 2319464 2319674 + 8.25 0.000 intron (NM_001089, intron 8 of 32) intron (NM_001089, intron 8 of 32) 21159 NM_001089 21 Hs.26630 NM_001089 ENSG00000167972 ABCA3 ABC-C|ABC3|EST111653|LBM180|SMDP3 ATP binding cassette subfamily A member 3 protein-coding chr2-4232 chr2 219060842 219061052 + 8.25 0.000 promoter-TSS (NM_002181) promoter-TSS (NM_002181) -26 NM_002181 3549 Hs.654504 NM_002181 ENSG00000163501 IHH BDA1|HHG2 Indian hedgehog signaling molecule protein-coding chr14-2261 chr14 18694428 18694638 + 8.25 0.000 Intergenic AluJo|SINE|Alu -60899 NR_046104 642426 Hs.578301 NR_046104 ENSG00000257504 LINC02297 - long intergenic non-protein coding RNA 2297 ncRNA chr4-7421 chr4 66331750 66331960 + 8.25 0.000 Intergenic Charlie4a|DNA|hAT-Charlie 55031 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr11-9482 chr11 62177335 62177545 + 8.25 0.000 Intergenic L1MA6|LINE|L1 -12776 NM_006552 10648 Hs.202686 NM_006552 ENSG00000168515 SCGB1D1 LIPA|LPHA|LPNA secretoglobin family 1D member 1 protein-coding chr10-5120 chr10 50101296 50101506 + 8.25 0.000 intron (NM_001005751, intron 17 of 30) L2a|LINE|L2 33447 NM_001330102 387680 Hs.365286 NM_018232 ENSG00000099290 WASHC2A FAM21A|FAM21B|bA56A21.1|bA98I6.1 WASH complex subunit 2A protein-coding chr16-6037 chr16 10126791 10127001 + 8.25 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 55171 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr3-5058 chr3 41110960 41111170 + 8.25 0.000 Intergenic Intergenic -88440 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chrX-5211 chrX 135047289 135047499 + 8.25 0.000 Intergenic Intergenic 4741 NM_001134321 26071 Hs.460924 NM_015582 ENSG00000203950 RTL8A CXX1b|FAM127B|MAR8A|SIRH6 retrotransposon Gag like 8A protein-coding chr9-6223 chr9 114447740 114447950 + 8.25 0.000 intron (NM_001083885, intron 3 of 11) MSTC|LTR|ERVL-MaLR -21677 NM_001346890 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr12-3981 chr12 16348956 16349166 + 8.25 0.000 intron (NM_145791, intron 1 of 3) intron (NM_145791, intron 1 of 3) 1283 NR_048547 4257 Hs.389700 NM_020300 ENSG00000008394 MGST1 GST12|MGST|MGST-I microsomal glutathione S-transferase 1 protein-coding chr1-13711 chr1 15092514 15092724 + 8.25 0.000 intron (NM_201628, intron 8 of 14) AluSz|SINE|Alu 59845 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr17-1544 chr17 82051753 82051963 + 8.25 0.000 promoter-TSS (NM_001321093) promoter-TSS (NM_001321093) -40 NM_001321090 2873 Hs.268530 NM_004127 ENSG00000169727 GPS1 COPS1|CSN1|SGN1 G protein pathway suppressor 1 protein-coding chrX-4497 chrX 65007408 65007618 + 8.25 0.000 intron (NM_001178032, intron 1 of 4) L1M4c|LINE|L1 27228 NM_001243804 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr11-4892 chr11 56496963 56497173 + 8.25 0.000 Intergenic SVA_B|Retroposon|SVA -5698 NM_001005282 219484 Hs.554522 NM_001005282 ENSG00000181371 OR5M8 OR11-194 olfactory receptor family 5 subfamily M member 8 protein-coding chr3-4611 chr3 5075167 5075377 + 8.25 0.000 Intergenic LTR33|LTR|ERVL -47020 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr1-4478 chr1 14945251 14945461 + 8.25 0.000 promoter-TSS (NM_001017999) promoter-TSS (NM_001017999) -563 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr8-5950 chr8 20159686 20159896 + 8.25 0.000 intron (NM_001142324, intron 10 of 15) MIRb|SINE|MIR 23345 NM_003053 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr1-7284 chr1 240234930 240235140 + 8.25 0.000 intron (NM_020066, intron 6 of 17) intron (NM_020066, intron 6 of 17) 143152 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr22-2961 chr22 50004281 50004491 + 8.25 0.000 intron (NM_001371416, intron 2 of 14) L1M4|LINE|L1 8379 NM_001001694 400935 Hs.526712 NM_001001694 ENSG00000188263 IL17REL - interleukin 17 receptor E like protein-coding chr17-7433 chr17 10991386 10991596 + 8.25 0.000 Intergenic AluJr|SINE|Alu -153404 NM_001101387 644139 Hs.553909 NM_001101387 ENSG00000233670 PIRT - phosphoinositide interacting regulator of transient receptor potential channels protein-coding chrX-4967 chrX 113822669 113822879 + 8.25 0.000 intron (NR_131204, intron 1 of 2) L1PA7|LINE|L1 115444 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr18-3141 chr18 40503959 40504169 + 8.25 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 437778 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr14-4505 chr14 38125545 38125755 + 8.25 0.000 Intergenic Intergenic -82254 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr7-5631 chr7 54464146 54464356 + 8.25 0.000 Intergenic Intergenic -78074 NM_001301009 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding chr7-7684 chr7 155258278 155258488 + 8.25 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -39389 NM_001346590 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr1-15623 chr1 162306091 162306301 + 8.25 0.000 intron (NM_014697, intron 4 of 9) LTR33C|LTR|ERVL -36350 NR_030283 693141 NR_030283 ENSG00000207729 MIR556 MIRN556|hsa-mir-556|mir-556 microRNA 556 ncRNA chr16-4194 chr16 11450588 11450798 + 8.25 0.000 exon (NM_001370704, exon 29 of 67) exon (NM_001370704, exon 29 of 67) -14567 NR_110907 101927131 Hs.569654 NR_110907 ENSG00000262999 LOC101927131 - uncharacterized LOC101927131 ncRNA chr8-7021 chr8 110367126 110367336 + 8.25 0.000 Intergenic L1MA8|LINE|L1 -391460 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr1-15272 chr1 114808978 114809188 + 8.25 0.000 Intergenic AluSz6|SINE|Alu -28398 NR_049742 80143 Hs.709277 NM_025073 ENSG00000052723 SIKE1 SIKE suppressor of IKBKE 1 protein-coding chr21-990 chr21 10647467 10647677 + 8.25 0.000 Intergenic Intergenic 126058 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr7-4800 chr7 92790872 92791082 + 8.25 0.000 intron (NM_001259, intron 2 of 7) intron (NM_001259, intron 2 of 7) 42982 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr5-3876 chr5 142528031 142528241 + 8.25 0.000 Intergenic L1ME3B|LINE|L1 93198 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr11-6963 chr11 114056593 114056803 + 8.25 0.000 Intergenic MIR|SINE|MIR -3013 NM_006006 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr2-9379 chr2 230276295 230276505 + 8.25 0.000 intron (NM_001278453, intron 12 of 23) Tigger1|DNA|TcMar-Tigger 50664 NM_001005176 11262 Hs.632549 NM_007237 ENSG00000079263 SP140 LYSP100|LYSP100-A|LYSP100-B SP140 nuclear body protein protein-coding chr3-6867 chr3 151518244 151518454 + 8.25 0.000 Intergenic MER57B1|LTR|ERV1 47646 NR_049818 100847036 NR_049818 ENSG00000264330 MIR5186 - microRNA 5186 ncRNA chr7-9258 chr7 123552589 123552799 + 8.25 0.000 intron (NR_104168, intron 2 of 5) MER83|LTR|ERV1 5077 NM_001282420 4698 Hs.651219 NM_005000 ENSG00000128609 NDUFA5 B13|CI-13KD-B|CI-13kB|NUFM|UQOR13 NADH:ubiquinone oxidoreductase subunit A5 protein-coding chr13-4083 chr13 77320038 77320248 + 8.25 0.000 intron (NM_015057, intron 1 of 82) LTR16|LTR|ERVL 6951 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr21-1654 chr21 25646342 25646552 + 8.25 0.000 intron (NR_072999, intron 1 of 9) intron (NR_072999, intron 1 of 9) 7165 NM_001270407 58494 Hs.517227 NM_021219 ENSG00000154721 JAM2 C21orf43|CD322|JAM-B|JAMB|PRO245|VE-JAM|VEJAM junctional adhesion molecule 2 protein-coding chr20-3476 chr20 57299346 57299556 + 8.25 0.000 Intergenic L1PA11|LINE|L1 22140 NR_036219 100422883 NR_036219 ENSG00000266666 MIR4325 - microRNA 4325 ncRNA chr8-2922 chr8 144546134 144546344 + 8.25 0.000 intron (NM_025251, intron 4 of 10) intron (NM_025251, intron 4 of 10) -17128 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr1-10025 chr1 87459324 87459534 + 8.25 0.000 Intergenic MLT1D-int|LTR|ERVL-MaLR -87774 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr14-2435 chr14 72888685 72888895 + 8.25 0.000 intron (NM_001280543, intron 1 of 10) intron (NM_001280543, intron 1 of 10) 3859 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr1-12228 chr1 212123603 212123813 + 8.25 0.000 Intergenic AluSz|SINE|Alu 46095 NR_036068 100422947 NR_036068 ENSG00000264358 MIR3122 mir-3122 microRNA 3122 ncRNA chr9-3261 chr9 21195266 21195476 + 8.25 0.000 Intergenic Intergenic 6834 NM_021057 3444 Hs.282274 NM_021057 ENSG00000214042 IFNA7 IFN-alphaJ|IFNA-J interferon alpha 7 protein-coding chr4-1965 chr4 139497986 139498196 + 8.25 0.000 intron (NM_001306199, intron 7 of 7) L2|LINE|L2 43970 NM_031296 83452 Hs.591679 NM_031296 ENSG00000172007 RAB33B SMC2 RAB33B, member RAS oncogene family protein-coding chr1-13550 chr1 7123879 7124089 + 8.25 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 265770 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr1-15949 chr1 190366961 190367171 + 8.25 0.000 intron (NM_199051, intron 2 of 7) THE1C-int|LTR|ERVL-MaLR 108944 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr3-6419 chr3 100495920 100496130 + 8.25 0.000 intron (NM_018004, intron 1 of 5) intron (NM_018004, intron 1 of 5) 3406 NM_018004 55076 Hs.658956 NM_018004 ENSG00000181458 TMEM45A DERP7|DNAPTP4 transmembrane protein 45A protein-coding chr8-6861 chr8 100066472 100066682 + 8.25 0.000 intron (NM_001286693, intron 4 of 25) intron (NM_001286693, intron 4 of 25) 39049 NM_001286693 26166 Hs.120021 NM_015668 ENSG00000132554 RGS22 CT145|PRTD-NY2 regulator of G protein signaling 22 protein-coding chr18-1339 chr18 79353251 79353461 + 8.25 0.000 intron (NR_148360, intron 26 of 31) L1ME1|LINE|L1 -42574 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr2-8999 chr2 194639319 194639529 + 8.25 0.000 Intergenic L1PA6|LINE|L1 -91171 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr12-3390 chr12 103140618 103140828 + 8.25 0.000 Intergenic Intergenic -11119 NR_126333 101929058 Hs.171310 NR_126333 ENSG00000257860 LOC101929058 - uncharacterized LOC101929058 ncRNA chr9-8403 chr9 119879327 119879537 + 8.25 0.000 Intergenic Intergenic -55628 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr5-1732 chr5 150378149 150378359 + 8.25 0.000 intron (NM_001008657, intron 14 of 17) intron (NM_001008657, intron 14 of 17) 20557 NM_001135245 6949 Hs.519672 NM_000356 ENSG00000070814 TCOF1 MFD1|TCS|TCS1|treacle treacle ribosome biogenesis factor 1 protein-coding chr17-5198 chr17 14396614 14396824 + 8.25 0.000 Intergenic Charlie10a|DNA|hAT-Charlie 92979 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr15-1677 chr15 45588551 45588761 + 8.25 0.000 intron (NR_132359, intron 1 of 2) intron (NR_132359, intron 1 of 2) 884 NR_132357 26258 Hs.7037 NM_012388 ENSG00000104164 BLOC1S6 BLOS6|HPS9|PA|PALLID|PLDN biogenesis of lysosomal organelles complex 1 subunit 6 protein-coding chr1-12101 chr1 157241060 157241270 + 8.25 0.000 Intergenic Intergenic -102574 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr18-1466 chr18 55401052 55401262 + 8.25 0.000 intron (NM_001348217, intron 5 of 18) intron (NM_001348217, intron 5 of 18) 531 NM_001330605 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr12-4056 chr12 51487535 51487745 + 8.25 0.000 intron (NM_001039960, intron 17 of 24) intron (NM_001039960, intron 17 of 24) 62523 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr7-6646 chr7 129207630 129207840 + 8.25 0.000 intron (NM_005631, intron 6 of 11) AluJb|SINE|Alu -17295 NM_001130720 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr9-2245 chr9 37953930 37954140 + 8.25 0.000 intron (NM_003028, intron 4 of 5) intron (NM_003028, intron 4 of 5) -49682 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chrX-2396 chrX 72260533 72260743 + 8.25 0.000 intron (NM_001170747, intron 3 of 3) L2c|LINE|L2 16610 NM_001007 6191 Hs.118076 NM_001007 ENSG00000198034 RPS4X CCG2|DXS306|RPS4|S4|SCAR|SCR10 ribosomal protein S4 X-linked protein-coding chr20-2327 chr20 9826376 9826586 + 8.25 0.000 intron (NM_020341, intron 1 of 10) intron (NM_020341, intron 1 of 10) 12595 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr2-7509 chr2 20187547 20187757 + 8.25 0.000 Intergenic Intergenic 37478 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr3-11017 chr3 181282625 181282835 + 8.25 0.000 intron (NR_075091, intron 3 of 7) intron (NR_075091, intron 3 of 7) 50993 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr1-6438 chr1 16330730 16330940 + 8.25 0.000 intron (NM_018994, intron 1 of 9) AluSq2|SINE|Alu 21645 NM_018994 54455 Hs.522384 NM_018994 ENSG00000037637 FBXO42 Fbx42|JFK F-box protein 42 protein-coding chr4-1937 chr4 100367520 100367730 + 8.25 0.000 Intergenic (TCTGCT)n|Simple_repeat|Simple_repeat 27622 NR_135619 107399301 NR_135619 SNORA101A - small nucleolar RNA, H/ACA box 101A snoRNA chr9-7815 chr9 81408388 81408598 + 8.25 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 281042 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr5-7415 chr5 27533347 27533557 + 8.25 0.000 Intergenic L1MCb|LINE|L1 61160 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr5-5896 chr5 32281811 32282021 + 8.25 0.000 intron (NM_001294344, intron 1 of 13) intron (NM_001294344, intron 1 of 13) 31023 NM_001294343 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr4-8747 chr4 186005070 186005280 + 8.25 0.000 Intergenic AluSq|SINE|Alu -48803 NM_001270771 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr5-6022 chr5 155512969 155513179 + 8.25 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 499319 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr2-7515 chr2 20474987 20475197 + 8.25 0.000 Intergenic Intergenic 26432 NR_157978 107985856 NR_157978 LOC107985856 - uncharacterized LOC107985856 ncRNA chr15-2573 chr15 56760411 56760621 + 8.25 0.000 Intergenic Intergenic -26430 NM_001288589 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding chr6-7386 chr6 50198164 50198374 + 8.25 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -148340 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding chr15-1748 chr15 51942321 51942531 + 8.25 0.000 intron (NM_001323903, intron 11 of 12) intron (NM_001323903, intron 11 of 12) -18306 NR_109775 100422556 Hs.664788 NR_109775 LOC100422556 - LEO1 homolog, Paf1/RNA polymerase II complex component pseudogene pseudo chr18-1823 chr18 21097451 21097661 + 8.25 0.000 intron (NM_005406, intron 1 of 32) MIRb|SINE|MIR 14257 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr7-4899 chr7 125611604 125611814 + 8.25 0.000 Intergenic L1M1|LINE|L1 -347418 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr8-4061 chr8 63908997 63909207 + 8.25 0.000 intron (NR_125826, intron 4 of 4) THE1B-int|LTR|ERVL-MaLR 139672 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr2-8674 chr2 149544679 149544889 + 8.25 0.000 Intergenic Intergenic -42574 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr5-6882 chr5 127919706 127919916 + 8.25 0.000 intron (NM_001317938, intron 6 of 6) (TGTCCCTC)n|Simple_repeat|Simple_repeat 163364 NR_152811 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA chr2-6797 chr2 51375845 51376055 + 8.25 0.000 intron (NR_135237, intron 3 of 10) THE1C|LTR|ERVL-MaLR 343349 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr12-6602 chr12 125701945 125702155 + 8.25 0.000 Intergenic Intergenic 79598 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr13-3419 chr13 99281901 99282111 + 8.25 0.000 intron (NR_026644, intron 4 of 8) intron (NR_026644, intron 4 of 8) -23578 NM_001098200 2841 Hs.741589 NM_005292 ENSG00000125245 GPR18 - G protein-coupled receptor 18 protein-coding chr2-12122 chr2 36195666 36195876 + 8.25 0.000 Intergenic Intergenic 159799 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr5-1748 chr5 178258706 178258916 + 8.25 0.000 intron (NM_173465, intron 12 of 28) AluJr|SINE|Alu -25989 NM_001278346 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr2-8011 chr2 69044621 69044831 + 8.25 0.000 intron (NM_032208, intron 2 of 17) intron (NM_032208, intron 2 of 17) 31582 NM_053034 84168 Hs.165859 NM_018153 ENSG00000169604 ANTXR1 ATR|GAPO|TEM8 ANTXR cell adhesion molecule 1 protein-coding chr8-2449 chr8 119769168 119769378 + 8.25 0.000 intron (NM_003184, intron 18 of 25) L1PA15-16|LINE|L1 63568 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr2-10758 chr2 37641973 37642183 + 8.25 0.000 3' UTR (NM_001270437, exon 2 of 2) 3' UTR (NM_001270437, exon 2 of 2) 30121 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr3-5310 chr3 127309244 127309454 + 8.25 0.000 Intergenic SVA_B|Retroposon|SVA -21303 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr1-12880 chr1 109595688 109595898 + 8.25 0.000 3' UTR (NM_006496, exon 9 of 9) 3' UTR (NM_006496, exon 9 of 9) -3100 NR_029583 406974 NR_029583 ENSG00000284443 MIR197 MIRN197|miR-197|miRNA197 microRNA 197 ncRNA chr8-5460 chr8 42355388 42355598 + 8.25 0.000 intron (NM_002690, intron 6 of 13) intron (NM_002690, intron 6 of 13) 16999 NM_002690 5423 Hs.654484 NM_002690 ENSG00000070501 POLB - DNA polymerase beta protein-coding chr3-9114 chr3 29888205 29888415 + 8.25 0.000 intron (NM_001003792, intron 8 of 13) (TATCTCA)n|Simple_repeat|Simple_repeat 45846 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr20-3207 chr20 51546788 51546998 + 8.25 0.000 intron (NM_001258292, intron 1 of 9) L2b|LINE|L2 -4174 NM_001258296 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr7-3928 chr7 128783370 128783580 + 8.25 0.000 Intergenic tRNA-Pro-CCY|tRNA|tRNA -7685 NM_001708 611 Hs.656404 NM_001708 ENSG00000128617 OPN1SW BCP|BOP|CBT opsin 1, short wave sensitive protein-coding chr9-7306 chr9 10143559 10143769 + 8.25 0.000 intron (NM_002839, intron 3 of 45) L1PA16|LINE|L1 344272 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr4-6355 chr4 102007957 102008167 + 8.25 0.000 intron (NM_017935, intron 7 of 16) intron (NM_017935, intron 7 of 16) 194220 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr6-3946 chr6 87237956 87238166 + 8.25 0.000 intron (NM_015021, intron 5 of 7) intron (NM_015021, intron 5 of 7) 82496 NM_015021 23036 Hs.444800 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding chr12-8354 chr12 131993967 131994177 + 8.25 0.000 intron (NM_015409, intron 11 of 52) intron (NM_015409, intron 11 of 52) -37152 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr1-4885 chr1 34365949 34366159 + 8.25 0.000 Intergenic Intergenic 189147 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr13-2744 chr13 97361004 97361214 + 8.25 0.000 intron (NM_207304, intron 6 of 6) intron (NM_207304, intron 6 of 6) -73060 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr2-8060 chr2 73033955 73034165 + 8.25 0.000 intron (NR_138476, intron 3 of 14) L2a|LINE|L2 25112 NM_001330411 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr15-3141 chr15 66786984 66787194 + 8.25 0.000 Intergenic L2b|LINE|L2 84853 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr18-1360 chr18 11668899 11669109 + 8.25 0.000 Intergenic MER4CL34|LTR|ERV1 -14063 NR_106975 102465690 NR_106975 ENSG00000283492 MIR7153 hsa-mir-7153|mir-7153 microRNA 7153 ncRNA chr10-5290 chr10 69606943 69607153 + 8.25 0.000 Intergenic L1M2|LINE|L1 -23199 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr8-5696 chr8 125736971 125737181 + 8.25 0.000 Intergenic Intergenic 214121 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr1-14766 chr1 68305195 68305405 + 8.25 0.000 Intergenic L2a|LINE|L2 -72754 NM_001193334 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chr19-6583 chr19 22700417 22700627 + 8.25 0.000 Intergenic SVA_D|Retroposon|SVA 66198 NM_020855 57615 Hs.232108 NM_020855 ENSG00000229676 ZNF492 ZNF115 zinc finger protein 492 protein-coding chr19-6095 chr19 3413632 3413842 + 8.25 0.000 intron (NM_001245002, intron 2 of 10) AluSx|SINE|Alu 47154 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr10-8221 chr10 73275558 73275768 + 8.25 0.000 non-coding (NR_038373, exon 4 of 4) non-coding (NR_038373, exon 4 of 4) 22922 NR_134459 414245 Hs.568860 NR_038373 ENSG00000227540 DNAJC9-AS1 C10orf103|bA537A6.3 DNAJC9 antisense RNA 1 ncRNA chr2-11980 chr2 27209628 27209838 + 8.25 0.000 intron (NR_028323, intron 2 of 16) intron (NR_028323, intron 2 of 16) -2298 NM_080592 51374 Hs.9527 NM_016085 ENSG00000138085 ATRAID APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18 all-trans retinoic acid induced differentiation factor protein-coding chrX-269 chrX 115233859 115234069 + 8.25 0.000 exon (NM_020871, exon 1 of 21) exon (NM_020871, exon 1 of 21) 108 NM_001243963 57631 Hs.65366 NM_020871 ENSG00000130224 LRCH2 dA204F4.4 leucine rich repeats and calponin homology domain containing 2 protein-coding chr2-6254 chr2 42605790 42606000 + 8.25 0.000 intron (NM_001330443, intron 3 of 16) SVA_F|Retroposon|SVA 37263 NM_001330443 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr11-7511 chr11 6836410 6836620 + 8.25 0.000 Intergenic L1MB1|LINE|L1 -9168 NM_178168 144124 Hs.447478 NM_178168 ENSG00000166363 OR10A5 JCG6|OR10A1|OR11-403 olfactory receptor family 10 subfamily A member 5 protein-coding chr15-3913 chr15 33074152 33074362 + 8.25 0.000 intron (NM_001277313, intron 5 of 20) MIRc|SINE|MIR -6083 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr3-6242 chr3 67648628 67648838 + 8.25 0.000 intron (NM_001177599, intron 1 of 10) intron (NM_001177599, intron 1 of 10) 5881 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr3-7644 chr3 30232395 30232605 + 8.25 0.000 Intergenic THE1C|LTR|ERVL-MaLR -286368 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr8-5802 chr8 144883020 144883230 + 8.25 0.000 intron (NM_001363105, intron 4 of 4) intron (NM_001363105, intron 4 of 4) 17180 NM_001363103 58500 Hs.532277 NM_021061 ENSG00000196150 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding chr5-7365 chr5 19392418 19392628 + 8.25 0.000 Intergenic Intergenic 493749 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr6-3839 chr6 40230062 40230272 + 8.25 0.000 Intergenic LTR39|LTR|ERV1 125839 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr1-15302 chr1 117150427 117150637 + 8.25 0.000 intron (NM_024626, intron 4 of 5) intron (NM_024626, intron 4 of 5) -28783 NM_001145635 80263 Hs.301526 NM_025188 ENSG00000134253 TRIM45 RNF99 tripartite motif containing 45 protein-coding chr10-6171 chr10 11539199 11539409 + 8.25 0.000 intron (NM_014688, intron 2 of 14) intron (NM_014688, intron 2 of 14) -7024 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr3-6988 chr3 168983016 168983226 + 8.25 0.000 Intergenic Intergenic 81176 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr10-8205 chr10 72342352 72342562 + 8.25 0.000 intron (NR_157570, intron 3 of 8) intron (NR_157570, intron 3 of 8) 12462 NM_001365081 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr4-3280 chr4 133775828 133776038 + 8.25 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 425856 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr16-2750 chr16 1993215 1993425 + 8.25 0.000 3' UTR (NM_004209, exon 4 of 4) 3' UTR (NM_004209, exon 4 of 4) 3350 NM_004209 9143 Hs.435277 NM_004209 ENSG00000127561 SYNGR3 - synaptogyrin 3 protein-coding chr3-11230 chr3 195558591 195558801 + 8.25 0.000 Intergenic Intergenic -15371 NM_006241 5504 Hs.535731 NM_006241 ENSG00000184203 PPP1R2 IPP-2|IPP2|PPP1R2A protein phosphatase 1 regulatory inhibitor subunit 2 protein-coding chr1-6900 chr1 145873337 145873547 + 8.25 0.000 exon (NM_001280799, exon 8 of 12) exon (NM_001280799, exon 8 of 12) 12424 NM_001280799 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 - ankyrin repeat domain 35 protein-coding chr8-5322 chr8 144576525 144576735 + 8.25 0.000 intron (NM_025251, intron 2 of 10) intron (NM_025251, intron 2 of 10) 29065 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr8-2535 chr8 26438173 26438383 + 8.25 0.000 Intergenic L1MB3|LINE|L1 47865 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr3-7986 chr3 178571923 178572133 + 8.25 0.000 intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 13178 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr2-13891 chr2 180440155 180440365 + 8.25 0.000 Intergenic Intergenic -251844 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr11-3735 chr11 28244979 28245189 + 8.25 0.000 intron (NM_001113528, intron 4 of 6) intron (NM_001113528, intron 4 of 6) 136696 NM_001113528 196074 Hs.243326 NM_152636 ENSG00000169519 METTL15 METT5D1 methyltransferase like 15 protein-coding chr2-9207 chr2 217294399 217294609 + 8.25 0.000 intron (NR_026597, intron 12 of 12) intron (NR_026597, intron 12 of 12) 11771 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr1-16701 chr1 246462478 246462688 + 8.25 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 44696 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr5-7865 chr5 73022654 73022864 + 8.25 0.000 intron (NM_001146032, intron 7 of 24) MLT1K|LTR|ERVL-MaLR 66718 NM_001146032 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr21-1399 chr21 44514731 44514941 + 8.25 0.000 intron (NR_103707, intron 6 of 6) intron (NR_103707, intron 6 of 6) -2379 NR_026547 114043 Hs.592163 NM_153204 TSPEAR-AS2 C21orf90 TSPEAR antisense RNA 2 ncRNA chrX-729 chrX 153548314 153548524 + 8.25 0.000 intron (NM_001001344, intron 7 of 19) intron (NM_001001344, intron 7 of 19) 12297 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr19-5043 chr19 49162117 49162327 + 8.25 0.000 intron (NM_001321285, intron 2 of 19) L2|LINE|L2 4430 NM_001195227 54795 Hs.467101 NM_017636 ENSG00000130529 TRPM4 LTrpC4|PFHB1B|TRPM4B|hTRPM4 transient receptor potential cation channel subfamily M member 4 protein-coding chr4-4385 chr4 41142056 41142266 + 8.25 0.000 intron (NM_173075, intron 2 of 16) intron (NM_173075, intron 2 of 16) 72381 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr13-2691 chr13 89957424 89957634 + 8.25 0.000 Intergenic AluJo|SINE|Alu 162188 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr12-7096 chr12 44551972 44552182 + 8.25 0.000 intron (NM_006159, intron 16 of 20) intron (NM_006159, intron 16 of 20) 323584 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr5-6276 chr5 107381370 107381580 + 8.25 0.000 intron (NM_001962, intron 4 of 4) intron (NM_001962, intron 4 of 4) 289462 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr9-6382 chr9 28330285 28330495 + 8.25 0.000 intron (NM_001354574, intron 4 of 5) L1MC2|LINE|L1 388915 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr2-5545 chr2 162073235 162073445 + 8.25 0.000 intron (NM_001935, intron 2 of 25) intron (NM_001935, intron 2 of 25) 875 NM_001935 1803 Hs.368912 NM_001935 ENSG00000197635 DPP4 ADABP|ADCP2|CD26|DPPIV|TP103 dipeptidyl peptidase 4 protein-coding chr2-5406 chr2 109622490 109622700 + 8.25 0.000 Intergenic Intergenic 8231 NM_023016 65124 Hs.355455 NM_023016 ENSG00000198142 SOWAHC ANKRD57|C2orf26 sosondowah ankyrin repeat domain family member C protein-coding chr20-2802 chr20 56745965 56746175 + 8.25 0.000 Intergenic Intergenic 116764 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr5-6430 chr5 157244205 157244415 + 8.25 0.000 exon (NM_005546, exon 13 of 17) exon (NM_005546, exon 13 of 17) -21813 NM_001037333 26999 Hs.519702 NM_014376 ENSG00000055163 CYFIP2 EIEE65|PIR121 cytoplasmic FMR1 interacting protein 2 protein-coding chr12-3606 chr12 55833195 55833405 + 8.25 0.000 non-coding (NR_036476, exon 4 of 5) non-coding (NR_036476, exon 4 of 5) -3664 NM_032364 85406 Hs.709320 NM_032364 ENSG00000135392 DNAJC14 DNAJ|DRIP78|HDJ3|LIP6 DnaJ heat shock protein family (Hsp40) member C14 protein-coding chr6-2784 chr6 141103453 141103663 + 8.25 0.000 Intergenic Intergenic 419744 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr2-9277 chr2 221629537 221629747 + 8.25 0.000 Intergenic Intergenic -55440 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr11-4264 chr11 65726315 65726525 + 8.25 0.000 Intergenic MER66-int|LTR|ERV1 -5482 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr2-9051 chr2 200147796 200148006 + 8.25 0.000 Intergenic Intergenic -157978 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr19-3983 chr19 1372082 1372292 + 8.25 0.000 TTS (NM_001369791) TTS (NM_001369791) -11720 NM_001363602 374291 Hs.211914 NM_024407 ENSG00000115286 NDUFS7 CI-20|CI-20KD|MC1DN3|MY017|PSST NADH:ubiquinone oxidoreductase core subunit S7 protein-coding chr16-6886 chr16 84377602 84377812 + 8.25 0.000 intron (NM_014861, intron 1 of 26) MLT1B|LTR|ERVL-MaLR 9184 NM_014861 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr15-2727 chr15 96286860 96287070 + 8.25 0.000 intron (NR_102743, intron 3 of 7) MIRc|SINE|MIR -39081 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr11-8695 chr11 5354266 5354476 + 8.25 0.000 intron (NM_001005567, intron 1 of 4) intron (NM_001005567, intron 1 of 4) 2863 NM_001004750 390058 Hs.553730 NM_001004750 ENSG00000176239 OR51B6 HOR5'Beta6 olfactory receptor family 51 subfamily B member 6 protein-coding chr11-9511 chr11 63739586 63739796 + 8.25 0.000 intron (NM_001265589, intron 3 of 8) intron (NM_001265589, intron 3 of 8) 29084 NM_001144936 65998 Hs.191073 NM_001144936 ENSG00000188070 C11orf95 - chromosome 11 open reading frame 95 protein-coding chr13-2215 chr13 23488579 23488789 + 8.25 0.000 Intergenic Intergenic 19172 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr6-8547 chr6 161565186 161565396 + 8.25 0.000 intron (NM_004562, intron 8 of 11) L2a|LINE|L2 94314 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr13-4164 chr13 87168280 87168490 + 8.25 0.000 Intergenic MER52D|LTR|ERV1 256465 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr2-5426 chr2 114033296 114033506 + 8.25 0.000 Intergenic Intergenic -53417 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr4-3534 chr4 165060871 165061081 + 8.25 0.000 Intergenic Intergenic 28977 NM_001258025 166655 Hs.368004 NM_152620 ENSG00000176979 TRIM60 RNF129|RNF33 tripartite motif containing 60 protein-coding chr15-3488 chr15 96857925 96858135 + 8.25 0.000 Intergenic MIR|SINE|MIR 74595 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr22-1554 chr22 37827260 37827470 + 8.25 0.000 Intergenic Intergenic 3983 NM_003614 8484 Hs.158353 NM_003614 ENSG00000128310 GALR3 - galanin receptor 3 protein-coding chr4-7379 chr4 61058442 61058652 + 8.25 0.000 Intergenic Intergenic -85109 NR_147148 105377249 Hs.575120 NR_147148 ENSG00000240152 LINC02271 - long intergenic non-protein coding RNA 2271 ncRNA chr14-2876 chr14 34003711 34003921 + 8.25 0.000 Intergenic Intergenic -52742 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr5-9184 chr5 178946531 178946741 + 8.25 0.000 intron (NM_001323307, intron 3 of 4) intron (NM_001323307, intron 3 of 4) 5438 NM_001323308 285676 Hs.259441 NM_182594 ENSG00000178187 ZNF454 - zinc finger protein 454 protein-coding chr6-6805 chr6 5940781 5940991 + 8.25 0.000 Intergenic Intergenic 63158 NM_001278711 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding chr22-3924 chr22 36544609 36544819 + 8.25 0.000 Intergenic Intergenic -15548 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr2-6534 chr2 205751728 205751938 + 8.25 0.000 intron (NM_018534, intron 11 of 15) intron (NM_018534, intron 11 of 15) 69332 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr16-1636 chr16 3746127 3746337 + 8.25 0.000 intron (NM_004380, intron 21 of 30) intron (NM_004380, intron 21 of 30) -28708 NM_001272049 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr15-5283 chr15 100672010 100672220 + 8.25 0.000 Intergenic Intergenic 69526 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 - ankyrin repeat and SOCS box containing 7 protein-coding chr7-8831 chr7 85758536 85758746 + 8.25 0.000 Intergenic L1PA15|LINE|L1 337519 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr17-2524 chr17 16329453 16329663 + 8.25 0.000 Intergenic Intergenic 23911 NM_181716 201161 Hs.433422 NM_181716 ENSG00000166582 CENPV 3110013H01Rik|CENP-V|PRR6|p30 centromere protein V protein-coding chr3-9993 chr3 99651466 99651676 + 8.25 0.000 intron (NM_020351, intron 1 of 3) intron (NM_020351, intron 1 of 3) 12977 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr5-8590 chr5 138080674 138080884 + 8.25 0.000 Intergenic MIR3|SINE|MIR -3113 NM_058244 7478 Hs.591274 NM_031933 ENSG00000061492 WNT8A WNT8D Wnt family member 8A protein-coding chr1-14942 chr1 86588612 86588822 + 8.25 0.000 intron (NR_135837, intron 4 of 4) L2a|LINE|L2 41639 NR_024602 22802 Hs.567422 NM_012128 ENSG00000016602 CLCA4 CaCC|CaCC2 chloride channel accessory 4 protein-coding chr2-4837 chr2 71244055 71244265 + 8.25 0.000 Intergenic Intergenic -17057 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr2-10673 chr2 22920559 22920769 + 8.25 0.000 Intergenic L1PREC2|LINE|L1 384185 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr1-16352 chr1 219659616 219659826 + 8.25 0.000 Intergenic Intergenic -46576 NM_001355457 643136 Hs.647764 NM_001085394 ENSG00000215817 ZC3H11B ZC3HDC11B zinc finger CCCH-type containing 11B protein-coding chrX-3345 chrX 133021009 133021219 + 8.25 0.000 Intergenic LTR41B|LTR|ERVL 7158 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding chr8-5751 chr8 140175723 140175933 + 8.25 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -75293 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr6-3106 chr6 96908630 96908840 + 8.25 0.000 intron (NM_001323258, intron 2 of 7) intron (NM_001323258, intron 2 of 7) 10652 NM_001323258 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr10-6079 chr10 130901518 130901728 + 8.25 0.000 Intergenic Intergenic 61045 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr22-4020 chr22 40464848 40465058 + 8.25 0.000 intron (NM_020831, intron 3 of 14) intron (NM_020831, intron 3 of 14) -1513 NM_001282660 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr14-4397 chr14 29759472 29759682 + 8.25 0.000 intron (NM_001330069, intron 1 of 18) intron (NM_001330069, intron 1 of 18) 167519 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr2-5790 chr2 227953142 227953352 + 8.25 0.000 Intergenic THE1B|LTR|ERVL-MaLR 81616 NM_178821 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr2-3230 chr2 231702016 231702226 + 8.25 0.000 Intergenic Intergenic -6404 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr5-7644 chr5 51988644 51988854 + 8.25 0.000 Intergenic Intergenic -19282 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chrX-5008 chrX 118730981 118731191 + 8.25 0.000 intron (NM_001560, intron 1 of 10) intron (NM_001560, intron 1 of 10) 3480 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr15-1553 chr15 68484753 68484963 + 8.25 0.000 Intergenic Intergenic -33515 NM_001324014 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr14-5409 chr14 104328629 104328839 + 8.25 0.000 Intergenic Intergenic 105150 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr12-7067 chr12 41756465 41756675 + 8.25 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -7619 NR_135041 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr2-9148 chr2 211277543 211277753 + 8.25 0.000 Intergenic L2c|LINE|L2 660077 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr8-2791 chr8 121262797 121263007 + 8.25 0.000 Intergenic Intergenic -376444 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr1-5758 chr1 119160723 119160933 + 8.25 0.000 intron (NR_125975, intron 4 of 6) intron (NR_125975, intron 4 of 6) -20156 NM_015836 10352 Hs.523506 NM_015836 ENSG00000116874 WARS2 NEMMLAS|TrpRS|mtTrpRS tryptophanyl tRNA synthetase 2, mitochondrial protein-coding chr20-1394 chr20 3808072 3808282 + 8.25 0.000 promoter-TSS (NR_109859) promoter-TSS (NR_109859) -317 NR_109859 101929125 Hs.744106 NR_109859 ENSG00000275491 LINC01730 - long intergenic non-protein coding RNA 1730 ncRNA chr15-3361 chr15 84655872 84656082 + 8.25 0.000 intron (NM_021077, intron 2 of 2) L2c|LINE|L2 -1634 NR_130946 84942 Hs.745027 NM_032856 ENSG00000177082 WDR73 GAMOS|GAMOS1|HSPC264 WD repeat domain 73 protein-coding chr6-4909 chr6 96424014 96424224 + 8.25 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -97687 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr4-1837 chr4 118835622 118835832 + 8.25 0.000 intron (NM_014822, intron 1 of 22) intron (NM_014822, intron 1 of 22) 399 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr11-10266 chr11 102632141 102632351 + 8.25 0.000 Intergenic L1MA4|LINE|L1 -6914 NM_004771 9313 Hs.591946 NM_004771 ENSG00000137674 MMP20 AI2A2|MMP-20 matrix metallopeptidase 20 protein-coding chr14-4409 chr14 30840440 30840650 + 8.25 0.000 Intergenic LTR18B|LTR|ERVL -33990 NM_001347720 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr4-5882 chr4 128220829 128221039 + 8.25 0.000 intron (NR_146772, intron 19 of 19) MIR|SINE|MIR 66879 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chrX-3489 chrX 38400479 38400689 + 8.25 0.000 intron (NM_000531, intron 4 of 9) LTR16B1|LTR|ERVL 47980 NM_000531 5009 Hs.117050 NM_000531 ENSG00000036473 OTC OCTD ornithine carbamoyltransferase protein-coding chr7-7924 chr7 8207774 8207984 + 8.25 0.000 intron (NM_001350836, intron 7 of 14) intron (NM_001350836, intron 7 of 14) 54173 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr15-2905 chr15 43266491 43266701 + 8.25 0.000 intron (NM_004245, intron 1 of 11) intron (NM_004245, intron 1 of 11) 332 NM_201631 9333 Hs.129719 NM_004245 ENSG00000104055 TGM5 PSS2|TGASE5|TGASEX|TGM6|TGMX|TGX transglutaminase 5 protein-coding chr5-4579 chr5 25835499 25835709 + 8.25 0.000 Intergenic AluSz|SINE|Alu 644651 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr7-8785 chr7 81300074 81300284 + 8.25 0.000 Intergenic Intergenic 261640 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chr10-4755 chr10 3261751 3261961 + 8.25 0.000 Intergenic Intergenic -56839 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr20-2434 chr20 24117478 24117688 + 8.25 0.000 Intergenic Intergenic -82184 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr21-1415 chr21 10601238 10601448 + 8.25 0.000 intron (NM_199260, intron 19 of 21) AluSc|SINE|Alu 79829 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr16-2428 chr16 77411440 77411650 + 8.25 0.000 intron (NM_199355, intron 3 of 22) intron (NM_199355, intron 3 of 22) 23489 NM_199355 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr1-9868 chr1 65832537 65832747 + 8.25 0.000 intron (NM_002600, intron 1 of 16) L3|LINE|CR1 39747 NM_002600 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chrX-3176 chrX 36101038 36101248 + 8.25 0.000 intron (NM_001304548, intron 32 of 63) intron (NM_001304548, intron 32 of 63) 181409 NM_001304548 286464 Hs.376425 NM_152632 ENSG00000165164 CFAP47 CHDC2|CXorf22|CXorf30|CXorf59 cilia and flagella associated protein 47 protein-coding chr10-4816 chr10 10946991 10947201 + 8.25 0.000 intron (NR_024411, intron 1 of 3) intron (NR_024411, intron 1 of 3) 5067 NR_015413 254312 Hs.498620 NR_015413 ENSG00000229240 LINC00710 - long intergenic non-protein coding RNA 710 ncRNA chr9-5894 chr9 132367941 132368151 + 8.25 0.000 Intergenic PABL_B|LTR|ERV1 -13060 NM_015046 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr16-2006 chr16 1452183 1452393 + 8.25 0.000 intron (NM_001287, intron 15 of 24) L1MB5|LINE|L1 -7799 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr1-6982 chr1 163565168 163565378 + 8.25 0.000 Intergenic Intergenic -142082 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr14-2937 chr14 44784805 44785015 + 8.25 0.000 intron (NR_146457, intron 2 of 4) L2c|LINE|L2 14216 NR_146457 101927351 Hs.196842 NR_146457 LINC02302 - long intergenic non-protein coding RNA 2302 ncRNA chr8-6050 chr8 24745191 24745401 + 8.25 0.000 Intergenic Intergenic -168465 NM_005382 4741 Hs.458657 NM_005382 ENSG00000104722 NEFM NEF3|NF-M|NFM neurofilament medium protein-coding chr19-4458 chr19 4996192 4996402 + 8.25 0.000 intron (NM_001370094, intron 1 of 10) L1M5|LINE|L1 27184 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chrX-1885 chrX 131506959 131507169 + 8.25 0.000 Intergenic L1PA8A|LINE|L1 -37010 NM_001004486 347468 Hs.553711 NM_001004486 ENSG00000171054 OR13H1 ORX1 olfactory receptor family 13 subfamily H member 1 protein-coding chr14-3819 chr14 71194162 71194372 + 8.25 0.000 Intergenic Intergenic -126209 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr14-5057 chr14 82614551 82614761 + 8.25 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -27976 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr18-1964 chr18 37557074 37557284 + 8.25 0.000 intron (NM_001353701, intron 1 of 1) intron (NM_001353701, intron 1 of 1) 8619 NM_001353752 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr2-4267 chr2 228508192 228508402 + 8.25 0.000 intron (NR_151716, intron 1 of 3) MER45A|DNA|hAT-Tip100 103098 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr19-4826 chr19 35953973 35954183 + 8.25 0.000 intron (NR_136525, intron 1 of 4) intron (NR_136525, intron 1 of 4) 6963 NR_136525 105372383 Hs.641592 NR_136525 LOC105372383 - uncharacterized LOC105372383 ncRNA chr17-3194 chr17 82283430 82283640 + 8.25 0.000 Intergenic Intergenic 9279 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr12-3629 chr12 85036714 85036924 + 8.25 0.000 promoter-TSS (NM_001100917) promoter-TSS (NM_001100917) 468 NM_001079910 84125 Hs.402200 NM_032165 ENSG00000133640 LRRIQ1 - leucine rich repeats and IQ motif containing 1 protein-coding chr5-5807 chr5 176725851 176726061 + 8.25 0.000 Intergenic Intergenic -17249 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr14-3907 chr14 100486459 100486669 + 8.25 0.000 intron (NM_001350950, intron 3 of 5) intron (NM_001350950, intron 3 of 5) 81506 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr19-4169 chr19 39494773 39494983 + 8.25 0.000 Intergenic L2a|LINE|L2 -4069 NM_203486 10683 Hs.127792 NM_016941 ENSG00000090932 DLL3 SCDO1 delta like canonical Notch ligand 3 protein-coding chr1-6706 chr1 55129400 55129610 + 8.25 0.000 exon (NM_015306, exon 32 of 68) exon (NM_015306, exon 32 of 68) 85859 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding chr16-4975 chr16 3247005 3247215 + 8.25 0.000 exon (NM_000243, exon 5 of 10) exon (NM_000243, exon 5 of 10) 9517 NM_001198536 4210 Hs.632221 NM_000243 ENSG00000103313 MEFV FMF|MEF|TRIM20 MEFV innate immuity regulator, pyrin protein-coding chr3-6041 chr3 50004680 50004890 + 8.25 0.000 intron (NM_001349194, intron 3 of 17) AluJr|SINE|Alu 64635 NM_001349190 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr20-2438 chr20 24376649 24376859 + 8.25 0.000 Intergenic L1ME3|LINE|L1 -92445 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr16-1333 chr16 31169498 31169708 + 8.25 0.000 Intergenic SVA_A|Retroposon|SVA -10507 NM_004960 2521 Hs.46894 NM_004960 ENSG00000089280 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding chr20-1562 chr20 63962607 63962817 + 8.25 0.000 exon (NM_020713, exon 13 of 17) exon (NM_020713, exon 13 of 17) -6296 NR_148435 54963 Hs.504998 NM_017859 ENSG00000198276 UCKL1 UCK1L|URKL1 uridine-cytidine kinase 1 like 1 protein-coding chr4-3126 chr4 169208376 169208586 + 8.25 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 62475 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr16-4344 chr16 31248841 31249051 + 8.25 0.000 Intergenic Intergenic -11029 NM_001145808 3684 Hs.172631 NM_000632 ENSG00000169896 ITGAM CD11B|CR3A|MAC-1|MAC1A|MO1A|SLEB6 integrin subunit alpha M protein-coding chrX-944 chrX 50014925 50015135 + 8.25 0.000 TTS (NR_030226) TTS (NR_030226) 432 NR_030226 574504 NR_030226 ENSG00000272080 MIR502 MIRN502|hsa-mir-502|mir-502 microRNA 502 ncRNA chr22-834 chr22 38570245 38570455 + 8.25 0.000 promoter-TSS (NR_103474) promoter-TSS (NR_103474) -150 NR_134627 105373031 Hs.144041 NR_134627 LOC105373031 - uncharacterized LOC105373031 ncRNA chr3-9788 chr3 71894006 71894216 + 8.25 0.000 Intergenic LTR16C|LTR|ERVL -108963 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr18-1247 chr18 52846873 52847083 + 8.25 0.000 intron (NM_005215, intron 2 of 28) intron (NM_005215, intron 2 of 28) -390123 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr8-2641 chr8 69548963 69549173 + 8.25 0.000 intron (NR_156414, intron 2 of 20) MLT1H2|LTR|ERVL-MaLR -43832 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr7-9548 chr7 140719806 140720016 + 8.25 0.000 3' UTR (NM_001354609, exon 19 of 19) 3' UTR (NM_001354609, exon 19 of 19) -22834 NR_024454 100134713 Hs.534141 NR_024454 ENSG00000240889 NDUFB2-AS1 - NDUFB2 antisense RNA 1 ncRNA chr7-8565 chr7 61928340 61928550 + 8.25 0.000 Intergenic ALR/Alpha|Satellite|centr 1375611 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr1-10087 chr1 94713701 94713911 + 8.25 0.000 intron (NR_160784, intron 1 of 3) intron (NR_160784, intron 1 of 3) 32094 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chrX-1599 chrX 94789456 94789666 + 8.25 0.000 Intergenic Intergenic 273665 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr6-5192 chr6 131264716 131264926 + 8.25 0.000 intron (NM_138633, intron 2 of 2) MSTB|LTR|ERVL-MaLR 14417 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr19-4173 chr19 40493048 40493258 + 8.25 0.000 intron (NM_020971, intron 5 of 35) MER115|DNA|hAT-Tip100 26152 NM_020971 57731 Hs.32706 NM_020971 ENSG00000160460 SPTBN4 CMND|NEDHND|QV|SPNB4|SPTBN3 spectrin beta, non-erythrocytic 4 protein-coding chr2-4218 chr2 215654144 215654354 + 8.25 0.000 intron (NR_037195, intron 5 of 9) AmnSINE2|SINE|tRNA-Deu -63794 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr17-6818 chr17 10844771 10844981 + 8.25 0.000 Intergenic Intergenic -6789 NM_001101387 644139 Hs.553909 NM_001101387 ENSG00000233670 PIRT - phosphoinositide interacting regulator of transient receptor potential channels protein-coding chrX-2544 chrX 99834455 99834665 + 8.25 0.000 Intergenic L1PBa1|LINE|L1 575713 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr18-1022 chr18 59718627 59718837 + 8.25 0.000 Intergenic Intergenic -21309 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr10-2880 chr10 100100817 100101027 + 8.25 0.000 Intergenic Intergenic -19053 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chr10-4216 chr10 120942934 120943144 + 8.25 0.000 Intergenic Intergenic 91677 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr8-5929 chr8 18863607 18863817 + 8.25 0.000 intron (NM_015310, intron 4 of 15) intron (NM_015310, intron 4 of 15) 23345 NM_001362819 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chrX-4420 chrX 53708415 53708625 + 8.25 0.000 Intergenic Intergenic -21801 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr16-5489 chr16 8597349 8597559 + 8.25 0.000 Intergenic AluSz6|SINE|Alu -6943 NM_001290097 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr4-5428 chr4 14926795 14927005 + 8.25 0.000 intron (NR_038857, intron 7 of 7) L2a|LINE|L2 -38731 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr1-7140 chr1 204703438 204703648 + 8.25 0.000 Intergenic Intergenic -17805 NM_006338 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr11-3695 chr11 4480841 4481051 + 8.25 0.000 Intergenic L1MEg|LINE|L1 -7933 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr16-3386 chr16 67309172 67309382 + 8.25 0.000 intron (NM_001100915, intron 2 of 15) intron (NM_001100915, intron 2 of 15) 17464 NM_001100915 146212 Hs.299127 NM_001100915 ENSG00000168676 KCTD19 - potassium channel tetramerization domain containing 19 protein-coding chr4-6385 chr4 111814399 111814609 + 8.25 0.000 Intergenic Intergenic -330950 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr2-5243 chr2 48829097 48829307 + 8.25 0.000 Intergenic L1PA12|LINE|L1 -73478 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr17-3264 chr17 33943577 33943787 + 8.25 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 213124 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr12-8353 chr12 131965228 131965438 + 8.25 0.000 intron (NM_015409, intron 2 of 52) L1MC4|LINE|L1 15391 NM_015409 57634 Hs.723478 NM_015409 ENSG00000183495 EP400 CAGH32|P400|TNRC12 E1A binding protein p400 protein-coding chr11-5531 chr11 91117128 91117338 + 8.25 0.000 Intergenic Intergenic -248031 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr6-6467 chr6 109794896 109795106 + 8.25 0.000 intron (NM_014845, intron 21 of 22) intron (NM_014845, intron 21 of 22) 103780 NM_014845 9896 Hs.529959 NM_014845 ENSG00000112367 FIG4 ALS11|BTOP|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding chr3-4646 chr3 31222010 31222220 + 8.25 0.000 Intergenic Intergenic -60328 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr14-1569 chr14 73776048 73776258 + 8.25 0.000 intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) 11055 NM_001043318 91748 Hs.594157 NM_194278 ENSG00000156030 ELMSAN1 C14orf117|C14orf43|LSR68|MIDEAS|c14_5541 ELM2 and Myb/SANT domain containing 1 protein-coding chr16-3923 chr16 84428950 84429160 + 8.25 0.000 intron (NM_001291454, intron 8 of 23) intron (NM_001291454, intron 8 of 23) 22467 NM_001291454 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr1-14654 chr1 58608342 58608552 + 8.25 0.000 Intergenic AluJo|SINE|Alu -31195 NM_002353 4070 Hs.23582 NM_002353 ENSG00000184292 TACSTD2 EGP-1|EGP1|GA733-1|GA7331|GP50|M1S1|TROP2 tumor associated calcium signal transducer 2 protein-coding chr2-10608 chr2 5546834 5547044 + 8.25 0.000 Intergenic MER103C|DNA|hAT-Charlie 144179 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr19-3374 chr19 12672937 12673147 + 8.25 0.000 exon (NM_032332, exon 7 of 9) exon (NM_032332, exon 7 of 9) 3289 NM_032332 84292 Hs.657204 NM_032332 ENSG00000123154 WDR83 MORG1 WD repeat domain 83 protein-coding chr1-7796 chr1 50367396 50367606 + 8.25 0.000 Intergenic HAL1|LINE|L1 55942 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr10-5388 chr10 74439399 74439609 + 8.25 0.000 intron (NM_001369124, intron 6 of 9) intron (NM_001369124, intron 6 of 9) 89820 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr4-4344 chr4 37762447 37762657 + 8.25 0.000 Intergenic Intergenic -64134 NM_018290 55276 Hs.23363 NM_018290 ENSG00000169299 PGM2 MSTP006 phosphoglucomutase 2 protein-coding chr16-3000 chr16 28068110 28068320 + 8.25 0.000 Intergenic MER102b|DNA|hAT-Charlie -4501 NM_001323900 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr13-3820 chr13 46961812 46962022 + 8.25 0.000 Intergenic Intergenic -64841 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr7-8267 chr7 37901494 37901704 + 8.25 0.000 Intergenic Intergenic 15218 NM_003014 6424 Hs.658169 NM_003014 ENSG00000106483 SFRP4 FRP-4|FRPHE|FRZB-2|PYL|sFRP-4 secreted frizzled related protein 4 protein-coding chr22-3165 chr22 29216128 29216338 + 8.25 0.000 intron (NM_001267895, intron 3 of 14) intron (NM_001267895, intron 3 of 14) 10337 NM_133455 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr11-10726 chr11 131658125 131658335 + 8.25 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 5326 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr18-1207 chr18 35345676 35345886 + 8.25 0.000 Intergenic Intergenic -1361 NM_006965 7572 Hs.514802 NM_006965 ENSG00000172466 ZNF24 KOX17|RSG-A|ZNF191|ZSCAN3|Zfp191 zinc finger protein 24 protein-coding chr10-1351 chr10 113126745 113126955 + 8.25 0.000 5' UTR (NM_001349871, exon 1 of 12) 5' UTR (NM_001349871, exon 1 of 12) 217 NM_001349871 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr1-7467 chr1 83026477 83026687 + 8.25 0.000 intron (NR_147074, intron 5 of 10) intron (NR_147074, intron 5 of 10) -40374 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chrX-2597 chrX 105765900 105766110 + 8.25 0.000 intron (NM_017416, intron 10 of 10) intron (NM_017416, intron 10 of 10) -56534 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr2-14061 chr2 197073615 197073825 + 8.25 0.000 intron (NR_160034, intron 16 of 28) LTR78|LTR|ERV1 -124271 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr4-4878 chr4 115573547 115573757 + 8.25 0.000 Intergenic Intergenic -460032 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr3-5248 chr3 106681230 106681440 + 8.25 0.000 Intergenic L2a|LINE|L2 559303 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr2-13478 chr2 147182469 147182679 + 8.25 0.000 Intergenic L1PA7|LINE|L1 595517 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-10422 chr2 198100523 198100733 + 8.25 0.000 intron (NM_006226, intron 3 of 5) intron (NM_006226, intron 3 of 5) 274469 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr12-7483 chr12 65955615 65955825 + 8.25 0.000 intron (NM_003483, intron 4 of 4) intron (NM_003483, intron 4 of 4) 68006 NR_106722 102464827 NR_106722 ENSG00000276878 MIR6074 hsa-mir-6074 microRNA 6074 ncRNA chr11-6059 chr11 31487928 31488138 + 8.25 0.000 intron (NM_144981, intron 1 of 6) intron (NM_144981, intron 1 of 6) 21589 NM_001304274 196294 Hs.502223 NM_144981 ENSG00000148950 IMMP1L IMMP1|IMP1|IMP1-LIKE inner mitochondrial membrane peptidase subunit 1 protein-coding chr9-8595 chr9 128166019 128166229 + 8.25 0.000 TTS (NM_001131018) TTS (NM_001131018) 5859 NM_024112 79095 Hs.522412 NM_024112 ENSG00000171159 C9orf16 EST00098 chromosome 9 open reading frame 16 protein-coding chr1-13075 chr1 179507684 179507894 + 8.25 0.000 intron (NR_073544, intron 20 of 25) intron (NR_073544, intron 20 of 25) 68159 NM_001297575 7827 Hs.412710 NM_014625 ENSG00000116218 NPHS2 PDCN|SRN1 NPHS2 stomatin family member, podocin protein-coding chr13-982 chr13 43007033 43007243 + 8.25 0.000 Intergenic LTR29|LTR|ERV1 -14897 NM_001330543 94240 Hs.546467 NM_033255 ENSG00000133106 EPSTI1 BRESI1 epithelial stromal interaction 1 protein-coding chr6-4648 chr6 49607500 49607710 + 8.25 0.000 intron (NM_000324, intron 7 of 9) intron (NM_000324, intron 7 of 9) 29269 NM_000324 6005 Hs.120950 NM_000324 ENSG00000112077 RHAG CD241|OHS|OHST|RH2|RH50A|RHNR|Rh50|Rh50GP|SLC42A1 Rh associated glycoprotein protein-coding chr12-1574 chr12 121039080 121039290 + 8.25 0.000 promoter-TSS (NM_003733) promoter-TSS (NM_003733) 57 NM_003733 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr14-3713 chr14 19814762 19814972 + 8.25 0.000 intron (NM_001004723, intron 1 of 1) L1PA7|LINE|L1 11097 NM_001004723 390429 Hs.512490 NM_001004723 ENSG00000176294 OR4N2 OR14-13|OR14-8 olfactory receptor family 4 subfamily N member 2 protein-coding chr5-8480 chr5 132760482 132760692 + 8.25 0.000 intron (NM_001300799, intron 9 of 9) intron (NM_001300799, intron 9 of 9) 13142 NM_001287252 645121 Hs.522057 NM_001039780 ENSG00000205089 CCNI2 - cyclin I family member 2 protein-coding chr3-9419 chr3 48583819 48584029 + 8.25 0.000 exon (NM_000094, exon 38 of 118) exon (NM_000094, exon 38 of 118) -4947 NR_031756 100313843 NR_031756 ENSG00000284251 MIR711 hsa-mir-711 microRNA 711 ncRNA chr1-12611 chr1 36829108 36829318 + 8.25 0.000 intron (NM_000831, intron 10 of 15) intron (NM_000831, intron 10 of 15) 205302 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr20-2347 chr20 14122823 14123033 + 8.25 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) 127412 NM_001351661 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr17-5122 chr17 7096458 7096668 + 8.25 0.000 Intergenic L1MD2|LINE|L1 -16312 NM_006344 10462 Hs.54403 NM_006344 ENSG00000132514 CLEC10A CD301|CLECSF13|CLECSF14|HML|HML2|MGL C-type lectin domain containing 10A protein-coding chr14-2144 chr14 83288218 83288428 + 8.25 0.000 Intergenic L2a|LINE|L2 645691 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr2-7186 chr2 209579305 209579515 + 8.25 0.000 promoter-TSS (NM_031847) promoter-TSS (NM_031847) 74 NM_001363913 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr5-6667 chr5 58149492 58149702 + 8.25 0.000 Intergenic Intergenic -27256 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr10-8580 chr10 95936995 95937205 + 8.25 0.000 intron (NM_001349008, intron 6 of 34) intron (NM_001349008, intron 6 of 34) 29135 NM_001349008 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr17-7996 chr17 49288857 49289067 + 8.25 0.000 promoter-TSS (NR_106745) promoter-TSS (NR_106745) -508 NR_106745 102465137 NR_106745 ENSG00000273500 MIR6129 hsa-mir-6129 microRNA 6129 ncRNA chr10-7128 chr10 100261629 100261839 + 8.25 0.000 intron (NM_001303404, intron 2 of 12) intron (NM_001303404, intron 2 of 12) 5904 NM_018294 55280 Hs.215502 NM_018294 ENSG00000095485 CWF19L1 C19L1|SCAR17|hDrn1 CWF19 like cell cycle control factor 1 protein-coding chr3-5578 chr3 6555854 6556064 + 8.25 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 249490 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr4-6334 chr4 94192747 94192957 + 8.25 0.000 intron (NR_125922, intron 1 of 8) AluSx1|SINE|Alu 14704 NR_125922 101929210 Hs.518877 NR_125922 ENSG00000246541 LOC101929210 - uncharacterized LOC101929210 ncRNA chr6-4721 chr6 62900844 62901054 + 8.25 0.000 Intergenic Intergenic 419028 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr5-5227 chr5 116393996 116394206 + 8.25 0.000 Intergenic Intergenic -19531 NR_104675 101927190 Hs.639849 NR_104675 LOC101927190 - uncharacterized LOC101927190 ncRNA chr14-1799 chr14 24396222 24396432 + 8.25 0.000 Intergenic LTR88b|LTR|Gypsy? -2676 NM_025081 57523 Hs.288348 NM_025081 ENSG00000205978 NYNRIN CGIN1|KIAA1305 NYN domain and retroviral integrase containing protein-coding chr1-16093 chr1 203354714 203354924 + 8.25 0.000 Intergenic Intergenic -3697 NM_002023 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr12-4108 chr12 60101798 60102008 + 8.25 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 412533 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr11-5026 chr11 82642760 82642970 + 8.25 0.000 Intergenic Intergenic 90999 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr6-3088 chr6 83708145 83708355 + 8.25 0.000 intron (NM_001242794, intron 1 of 19) CpG 309 NM_001363677 9892 Hs.368046 NM_014841 ENSG00000065609 SNAP91 AP180|CALM synaptosome associated protein 91 protein-coding chr4-7330 chr4 56552490 56552700 + 8.25 0.000 exon (NM_001256475, exon 3 of 9) exon (NM_001256475, exon 3 of 9) 21989 NM_001256475 100506564 Hs.573073 NM_001256475 ENSG00000249693 THEGL - theg spermatid protein like protein-coding chr10-6730 chr10 127755349 127755559 + 8.25 0.000 Intergenic Intergenic 18269 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr9-8488 chr9 124377718 124377928 + 8.25 0.000 intron (NM_002799, intron 6 of 7) intron (NM_002799, intron 6 of 7) 24350 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chrX-4261 chrX 40316404 40316614 + 8.25 0.000 Intergenic MSTB|LTR|ERVL-MaLR 53592 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr17-5622 chr17 49277220 49277430 + 8.25 0.000 Intergenic AluSc8|SINE|Alu 11129 NR_106745 102465137 NR_106745 ENSG00000273500 MIR6129 hsa-mir-6129 microRNA 6129 ncRNA chr1-10975 chr1 215083721 215083931 + 8.25 0.000 intron (NM_001017425, intron 1 of 6) intron (NM_001017425, intron 1 of 6) 1089 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr13-1734 chr13 101545690 101545900 + 8.25 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 55843 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr1-14179 chr1 33145292 33145502 + 8.25 0.000 TTS (NM_001330483) TTS (NM_001330483) 31153 NM_001330483 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr10-5572 chr10 89915100 89915310 + 8.25 0.000 TTS (NR_149080) TTS (NR_149080) 27071 NR_149079 105378425 Hs.559891 NR_149079 ENSG00000280560 LINC01374 TCONS_00018278 long intergenic non-protein coding RNA 1374 ncRNA chr5-5542 chr5 147082736 147082946 + 8.25 0.000 Intergenic Intergenic -1321 NM_001271899 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr6-7629 chr6 79463530 79463740 + 8.25 0.000 Intergenic L3|LINE|CR1 73795 NM_001122769 167691 Hs.21945 NM_181714 ENSG00000135338 LCA5 C6orf152 lebercilin LCA5 protein-coding chr2-12813 chr2 90207406 90207616 + 8.25 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -569604 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr5-5172 chr5 110080747 110080957 + 8.25 0.000 Intergenic L1MC4|LINE|L1 197670 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr20-1754 chr20 49620227 49620437 + 8.25 0.000 Intergenic L2c|LINE|L2 -52195 NM_000961 5740 Hs.302085 NM_000961 ENSG00000124212 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 synthase protein-coding chr14-3297 chr14 84807131 84807341 + 8.25 0.000 Intergenic Intergenic -464696 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr20-2172 chr20 45247465 45247675 + 8.25 0.000 Intergenic Tigger4|DNA|TcMar-Tigger 6994 NM_003064 6590 Hs.517070 NM_003064 ENSG00000124107 SLPI ALK1|ALP|BLPI|HUSI|HUSI-I|MPI|WAP4|WFDC4 secretory leukocyte peptidase inhibitor protein-coding chr7-7880 chr7 5877401 5877611 + 8.25 0.000 Intergenic Intergenic -3292 NM_001097622 654231 Hs.571315 NM_001097622 ENSG00000122543 OCM OCM1|OM|ONCM oncomodulin protein-coding chr18-1987 chr18 40084607 40084817 + 8.25 0.000 intron (NR_110791, intron 3 of 3) MER21A|LTR|ERVL 18426 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr6-3233 chr6 143677960 143678170 + 8.25 0.000 promoter-TSS (NM_001100164) promoter-TSS (NM_001100164) 100 NM_001100164 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr2-12250 chr2 44658271 44658481 + 8.25 0.000 intron (NM_024766, intron 3 of 10) MER20B|DNA|hAT-Charlie 280512 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr1-9492 chr1 37152652 37152862 + 8.25 0.000 Intergenic Intergenic -8806 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr1-16345 chr1 218711105 218711315 + 8.25 0.000 intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 201115 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr4-5560 chr4 143352355 143352565 + 8.25 0.000 intron (NM_207123, intron 1 of 10) intron (NM_207123, intron 1 of 10) 9000 NR_036091 100423017 NR_036091 ENSG00000265623 MIR3139 - microRNA 3139 ncRNA chr20-1614 chr20 11035221 11035431 + 8.25 0.000 Intergenic Intergenic 8782 NR_146878 728434 Hs.570365 NR_146878 ENSG00000125899 C20orf187 - chromosome 20 open reading frame 187 (putative) ncRNA chr2-4565 chr2 71051481 71051691 + 8.25 0.000 Intergenic SATR1|Satellite|Satellite -16710 NM_001330426 55577 Hs.7036 NM_017567 ENSG00000124357 NAGK GNK|HSA242910 N-acetylglucosamine kinase protein-coding chr12-5713 chr12 115595577 115595787 + 8.25 0.000 Intergenic Intergenic 552972 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr7-7263 chr7 31191262 31191472 + 8.25 0.000 Intergenic MLT2B3|LTR|ERVL 138906 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr6-7740 chr6 90963501 90963711 + 8.25 0.000 Intergenic Intergenic -376534 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr12-4057 chr12 51593560 51593770 + 8.25 0.000 intron (NM_001369788, intron 1 of 25) intron (NM_001369788, intron 1 of 25) 2429 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr6-4427 chr6 33636414 33636624 + 8.25 0.000 intron (NM_002224, intron 1 of 57) L2a|LINE|L2 -2774 NR_134628 101929188 Hs.658327 NR_134628 LOC101929188 - uncharacterized LOC101929188 ncRNA chr8-3839 chr8 30698571 30698781 + 8.25 0.000 intron (NM_000637, intron 6 of 12) intron (NM_000637, intron 6 of 12) 29170 NM_000637 2936 Hs.271510 NM_000637 ENSG00000104687 GSR GR|HEL-75|HEL-S-122m glutathione-disulfide reductase protein-coding chr20-1600 chr20 5496247 5496457 + 8.25 0.000 non-coding (NR_015406, exon 2 of 2) non-coding (NR_015406, exon 2 of 2) 8244 NR_015406 149837 Hs.123609 NR_015406 ENSG00000205181 LINC00654 - long intergenic non-protein coding RNA 654 ncRNA chr1-16138 chr1 205334343 205334553 + 8.25 0.000 Intergenic Intergenic -12703 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr10-3993 chr10 131044649 131044859 + 8.25 0.000 Intergenic Intergenic -50464 NR_120623 101927489 Hs.659317 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA chrX-2616 chrX 107775678 107775888 + 8.25 0.000 promoter-TSS (NM_198057) promoter-TSS (NM_198057) 4 NM_198057 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr15-4693 chr15 66344001 66344211 + 8.25 0.000 intron (NM_001289986, intron 5 of 6) FRAM|SINE|Alu 3236 NR_004388 692149 NR_004388 ENSG00000252712 SCARNA14 U100 small Cajal body-specific RNA 14 ncRNA chr4-4015 chr4 1829478 1829688 + 8.25 0.000 intron (NM_012318, intron 6 of 13) AluJo|SINE|Alu 26573 NM_012318 3954 Hs.120165 NM_012318 ENSG00000168924 LETM1 SLC55A1 leucine zipper and EF-hand containing transmembrane protein 1 protein-coding chr22-3379 chr22 30986427 30986637 + 8.25 0.000 Intergenic AluSq10|SINE|Alu 17321 NR_152868 55000 Hs.554829 NR_002323 ENSG00000253352 TUG1 LINC00080|NCRNA00080|TI-227H taurine up-regulated 1 ncRNA chr3-5003 chr3 23356227 23356437 + 8.25 0.000 intron (NM_001370225, intron 3 of 5) intron (NM_001370225, intron 3 of 5) 153005 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr2-11101 chr2 128187024 128187234 + 8.25 0.000 intron (NR_027671, intron 39 of 40) intron (NR_027671, intron 39 of 40) 95929 NR_027671 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr21-775 chr21 44779751 44779961 + 8.25 0.000 intron (NM_001202489, intron 1 of 3) MIR3|SINE|MIR 21964 NM_001202489 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding GL000216.2-12 GL000216.2 126876 127086 + 8.25 0.000 NA NA NA NA chr14-4182 chr14 84289228 84289438 + 8.25 0.000 Intergenic Intergenic -982599 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr1-10257 chr1 118950060 118950270 + 8.25 0.000 intron (NM_152380, intron 1 of 7) intron (NM_152380, intron 1 of 7) 38178 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr3-5525 chr3 197808351 197808561 + 8.25 0.000 intron (NM_001365717, intron 1 of 19) L1MDa|LINE|L1 17202 NM_001365715 84859 Hs.518414 NM_032773 ENSG00000186001 LRCH3 - leucine rich repeats and calponin homology domain containing 3 protein-coding chr5-4252 chr5 136545291 136545501 + 8.25 0.000 Intergenic L1M2|LINE|L1 -179920 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr2-7651 chr2 28369128 28369338 + 8.25 0.000 Intergenic Intergenic -23625 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr1-12105 chr1 157928629 157928839 + 8.25 0.000 intron (NR_135760, intron 1 of 3) MLT1K|LTR|ERVL-MaLR 2767 NR_135760 105371458 Hs.591494 NR_135760 ENSG00000236957 LOC105371458 - uncharacterized LOC105371458 ncRNA chr9-7478 chr9 28755715 28755925 + 8.25 0.000 intron (NM_001354574, intron 2 of 5) intron (NM_001354574, intron 2 of 5) -36515 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr10-8132 chr10 70270199 70270409 + 8.25 0.000 intron (NM_022146, intron 1 of 3) intron (NM_022146, intron 1 of 3) 13700 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr15-4458 chr15 47922347 47922557 + 8.25 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -76216 NR_120336 101928442 Hs.242804 NR_120336 ENSG00000259572 LINC01491 - long intergenic non-protein coding RNA 1491 ncRNA chr10-3364 chr10 17233089 17233299 + 8.25 0.000 intron (NM_003380, intron 3 of 9) AluSz|SINE|Alu -3209 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr16-3289 chr16 88935254 88935464 + 8.25 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) -4678 NM_001290330 100129697 Hs.689377 NM_001290330 LOC100129697 - uncharacterized LOC100129697 protein-coding chr7-6720 chr7 3305721 3305931 + 8.25 0.000 intron (NM_152744, intron 1 of 44) MIR|SINE|MIR 4574 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr2-12162 chr2 38974837 38975047 + 8.25 0.000 3' UTR (NM_001367623, exon 17 of 17) 3' UTR (NM_001367623, exon 17 of 17) -14598 NR_028386 375196 Hs.659035 NR_028386 ENSG00000269210 LOC375196 - uncharacterized LOC375196 ncRNA chr6-4118 chr6 157375659 157375869 + 8.25 0.000 Intergenic MER1A|DNA|hAT-Charlie -5426 NM_024630 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr11-6255 chr11 57370985 57371195 + 8.25 0.000 3' UTR (NM_002559, exon 12 of 12) 3' UTR (NM_002559, exon 12 of 12) 10060 NM_006093 10394 Hs.251386 NM_006093 ENSG00000156575 PRG3 MBP2|MBPH proteoglycan 3, pro eosinophil major basic protein 2 protein-coding chr1-10515 chr1 167564834 167565044 + 8.25 0.000 Intergenic L2a|LINE|L2 -11177 NM_003851 8804 Hs.5710 NM_003851 ENSG00000143162 CREG1 CREG cellular repressor of E1A stimulated genes 1 protein-coding chr12-7807 chr12 98745635 98745845 + 8.25 0.000 exon (NM_001352222, exon 11 of 11) exon (NM_001352222, exon 11 of 11) 100440 NM_181869 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr4-5446 chr4 24889713 24889923 + 8.25 0.000 intron (NM_001130726, intron 1 of 11) intron (NM_001130726, intron 1 of 11) 23160 NM_001130726 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr9-5655 chr9 122261207 122261417 + 8.25 0.000 intron (NR_027126, intron 2 of 6) intron (NR_027126, intron 2 of 6) -3291 NM_001173512 92399 Hs.368011 NM_138777 ENSG00000148187 MRRF MRFF|MTRRF|RRF mitochondrial ribosome recycling factor protein-coding chr12-5251 chr12 109317011 109317221 + 8.25 0.000 Intergenic Intergenic -7832 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr12-3461 chr12 118059812 118060022 + 8.25 0.000 intron (NM_001278557, intron 1 of 8) intron (NM_001278557, intron 1 of 8) 1294 NM_001278558 55884 Hs.506985 NM_018639 ENSG00000176871 WSB2 SBA2 WD repeat and SOCS box containing 2 protein-coding chr16-6311 chr16 48107020 48107230 + 8.25 0.000 intron (NM_033226, intron 18 of 28) intron (NM_033226, intron 18 of 28) 39645 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr9-5526 chr9 107458995 107459205 + 8.25 0.000 intron (NR_121581, intron 1 of 7) intron (NR_121581, intron 1 of 7) 7485 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr13-4300 chr13 99705221 99705431 + 8.25 0.000 intron (NR_104592, intron 1 of 9) AluSx|SINE|Alu -14355 NR_046526 100874063 Hs.577064 NR_046526 ENSG00000227659 CLYBL-AS2 - CLYBL antisense RNA 2 ncRNA chr7-9523 chr7 139589030 139589240 + 8.25 0.000 intron (NM_001113239, intron 12 of 14) intron (NM_001113239, intron 12 of 14) 65450 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr7-9703 chr7 155409149 155409359 + 8.25 0.000 Intergenic Intergenic 27178 NR_147174 100286906 Hs.568111 NR_147174 LOC100286906 - uncharacterized LOC100286906 ncRNA chr2-10839 chr2 57554824 57555034 + 8.25 0.000 Intergenic Intergenic -352722 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr10-5634 chr10 96585831 96586041 + 8.25 0.000 intron (NM_020123, intron 1 of 14) intron (NM_020123, intron 1 of 14) 1076 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr16-2118 chr16 2286470 2286680 + 8.25 0.000 intron (NM_001089, intron 22 of 32) intron (NM_001089, intron 22 of 32) 11955 NR_039868 100616241 NR_039868 ENSG00000264004 MIR4717 - microRNA 4717 ncRNA chr19-6302 chr19 8564630 8564840 + 8.25 0.000 intron (NM_012335, intron 1 of 27) intron (NM_012335, intron 1 of 27) 12707 NM_012335 4542 Hs.465818 NM_012335 ENSG00000142347 MYO1F - myosin IF protein-coding chr16-6838 chr16 81908591 81908801 + 8.25 0.000 intron (NM_002661, intron 17 of 32) intron (NM_002661, intron 17 of 32) 102774 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr21-1000 chr21 15057635 15057845 + 8.25 0.000 intron (NM_003489, intron 1 of 3) MIRb|SINE|MIR 7260 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr17-5084 chr17 4426966 4427176 + 8.25 0.000 Intergenic MIR|SINE|MIR -6869 NM_001320449 201305 Hs.657543 NM_182538 ENSG00000182557 SPNS3 SLC62A3 sphingolipid transporter 3 (putative) protein-coding chr19-3714 chr19 39485956 39486166 + 8.25 0.000 intron (NM_001001563, intron 6 of 10) intron (NM_001001563, intron 6 of 10) 5223 NM_001329559 92609 Hs.590956 NM_001001563 ENSG00000105197 TIMM50 MGCA9|TIM50|TIM50L translocase of inner mitochondrial membrane 50 protein-coding chr22-1546 chr22 33043982 33044192 + 8.25 0.000 intron (NM_003490, intron 1 of 13) MIRb|SINE|MIR 8457 NM_001369908 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr7-4853 chr7 104893296 104893506 + 8.25 0.000 intron (NM_199000, intron 2 of 2) AluSz|SINE|Alu 33244 NR_027374 723809 Hs.124316 NR_027374 ENSG00000225329 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA chr7-6058 chr7 112930943 112931153 + 8.25 0.000 intron (NM_152556, intron 1 of 4) intron (NM_152556, intron 1 of 4) 8827 NM_152556 154743 Hs.489734 NM_152556 ENSG00000164603 BMT2 C7orf60|SAMTOR base methyltransferase of 25S rRNA 2 homolog protein-coding chr11-8945 chr11 18767572 18767782 + 8.25 0.000 intron (NM_001278238, intron 1 of 13) intron (NM_001278238, intron 1 of 13) 24121 NM_001039970 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr18-1189 chr18 26510526 26510736 + 8.25 0.000 intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) 37922 NM_001142730 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr2-7450 chr2 12702932 12703142 + 8.25 0.000 Intergenic Intergenic -13835 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr22-1779 chr22 29276397 29276607 + 8.25 0.000 intron (NM_013986, intron 5 of 17) intron (NM_013986, intron 5 of 17) 8234 NM_001163285 2130 Hs.374477 NM_005243 ENSG00000182944 EWSR1 EWS|EWS-FLI1|bK984G1.4 EWS RNA binding protein 1 protein-coding chr20-3477 chr20 57327686 57327896 + 8.25 0.000 Intergenic AluSq|SINE|Alu -2012 NM_012444 23626 Hs.159737 NM_012444 ENSG00000054796 SPO11 CT35|SPATA43|TOPVIA SPO11 initiator of meiotic double stranded breaks protein-coding chr4-8004 chr4 116375072 116375282 + 8.25 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR 75452 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr10-3306 chr10 1100729 1100939 + 8.25 0.000 intron (NM_014023, intron 9 of 13) intron (NM_014023, intron 9 of 13) -44130 NM_001317955 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr21-688 chr21 21678141 21678351 + 8.25 0.000 Intergenic L1PA8A|LINE|L1 59073 NR_038872 378828 Hs.551009 NR_038872 ENSG00000238265 LINC00317 C21orf117|NCRNA00317|PRED89 long intergenic non-protein coding RNA 317 ncRNA chr3-7800 chr3 88514352 88514562 + 8.25 0.000 Intergenic Intergenic 176001 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr1-16664 chr1 241986055 241986265 + 8.25 0.000 Intergenic Intergenic 12938 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr4-6893 chr4 13837473 13837683 + 8.25 0.000 intron (NR_121681, intron 3 of 3) MER54A|LTR|ERVL 182399 NR_121681 101929071 Hs.543714 NR_121681 ENSG00000250634 LINC01182 - long intergenic non-protein coding RNA 1182 ncRNA chr1-10963 chr1 213725162 213725372 + 8.25 0.000 Intergenic Intergenic -199482 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr3-5372 chr3 149099210 149099420 + 8.25 0.000 intron (NR_046648, intron 1 of 2) AluSx1|SINE|Alu -12761 NM_001318934 6596 Hs.3068 NM_003071 ENSG00000071794 HLTF HIP116|HIP116A|HLTF1|RNF80|SMARCA3|SNF2L3|ZBU1 helicase like transcription factor protein-coding chr1-9948 chr1 78236728 78236938 + 8.25 0.000 intron (NR_027310, intron 1 of 5) L2b|LINE|L2 7234 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr13-2656 chr13 80597564 80597774 + 8.25 0.000 Intergenic Intergenic -256543 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr14-3170 chr14 69880495 69880705 + 8.25 0.000 intron (NM_001034852, intron 1 of 11) intron (NM_001034852, intron 1 of 11) 1184 NM_001034852 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding chr5-5157 chr5 108554941 108555151 + 8.25 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -172948 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr8-5504 chr8 58910992 58911202 + 8.25 0.000 intron (NM_014729, intron 3 of 8) intron (NM_014729, intron 3 of 8) 208050 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr1-3951 chr1 111725077 111725287 + 8.25 0.000 3' UTR (NM_198926, exon 2 of 2) 3' UTR (NM_198926, exon 2 of 2) 14213 NM_019099 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr6-7849 chr6 105113322 105113532 + 8.25 0.000 intron (NM_147147, intron 7 of 7) intron (NM_147147, intron 7 of 7) 22919 NM_147147 11149 Hs.221660 NM_007073 ENSG00000112276 BVES CARICK|HBVES|LGMD2X|LGMDR25|POP1|POPDC1 blood vessel epicardial substance protein-coding chr12-6255 chr12 42400417 42400627 + 8.25 0.000 TTS (NM_001364833) TTS (NM_001364833) 68724 NM_001364834 51535 Hs.444157 NM_016488 ENSG00000134283 PPHLN1 CR|HSPC206|HSPC232 periphilin 1 protein-coding chr6-6615 chr6 149544649 149544859 + 8.25 0.000 intron (NM_139126, intron 1 of 12) L2c|LINE|L2 1289 NM_139126 85313 Hs.744238 NM_139126 ENSG00000131013 PPIL4 HDCME13P peptidylprolyl isomerase like 4 protein-coding chr11-9922 chr11 75591871 75592081 + 8.25 0.000 intron (NM_033063, intron 3 of 3) intron (NM_033063, intron 3 of 3) 8780 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr1-10411 chr1 157250308 157250518 + 8.25 0.000 Intergenic Intergenic -111822 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr11-8687 chr11 4674429 4674639 + 8.25 0.000 Intergenic L1MA10|LINE|L1 23319 NM_030774 81285 Hs.501758 NM_030774 ENSG00000167332 OR51E2 HPRAJ|OR51E3P|OR52A2|PSGR olfactory receptor family 51 subfamily E member 2 protein-coding chr4-3428 chr4 77587009 77587219 + 8.25 0.000 intron (NM_006419, intron 1 of 4) intron (NM_006419, intron 1 of 4) 75361 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr10-5244 chr10 66196302 66196512 + 8.25 0.000 intron (NM_001127384, intron 13 of 17) LTR16D|LTR|ERVL 624982 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chrX-1680 chrX 4392220 4392430 + 8.25 0.000 Intergenic AluJb|SINE|Alu 241247 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chrX-4192 chrX 35023207 35023417 + 8.25 0.000 Intergenic Intergenic 80516 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr5-5876 chr5 8409478 8409688 + 8.25 0.000 intron (NR_039984, intron 2 of 5) intron (NR_039984, intron 2 of 5) 47981 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr20-1506 chr20 35271848 35272058 + 8.25 0.000 intron (NM_006690, intron 8 of 8) intron (NM_006690, intron 8 of 8) 6169 NM_001355004 101410538 Hs.356273 NM_001355003 ENSG00000126005 MMP24OS MMP24-AS1 MMP24 opposite strand protein-coding chr14-5223 chr14 97181443 97181653 + 8.25 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 26691 NR_146554 105370648 NR_146554 ENSG00000259110 LINC02304 - long intergenic non-protein coding RNA 2304 ncRNA chr1-8176 chr1 18869099 18869309 + 8.25 0.000 Intergenic Intergenic -9543 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr16-2557 chr16 62079631 62079841 + 8.25 0.000 Intergenic AluJr4|SINE|Alu -43298 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr2-6731 chr2 31135184 31135394 + 8.25 0.000 intron (NM_001329096, intron 1 of 16) MER5A|DNA|hAT-Charlie 3151 NM_001253826 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr6-5866 chr6 37650053 37650263 + 8.25 0.000 exon (NM_153487, exon 8 of 17) exon (NM_153487, exon 8 of 17) 47725 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr1-14652 chr1 58402561 58402771 + 8.25 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 144060 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr10-6055 chr10 128074113 128074323 + 8.25 0.000 intron (NM_001323354, intron 16 of 19) L1MB7|LINE|L1 -11793 NR_136150 105378553 NR_136149 AS-PTPRE - lncRNA antisense to PTPRE protein-coding gene ncRNA chr5-2757 chr5 149442809 149443019 + 8.25 0.000 Intergenic Intergenic 12268 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr17-3795 chr17 39739398 39739608 + 8.25 0.000 promoter-TSS (NM_001242443) promoter-TSS (NM_001242443) -464 NM_001242443 2886 Hs.86859 NM_005310 ENSG00000141738 GRB7 - growth factor receptor bound protein 7 protein-coding chr22-3287 chr22 48426270 48426480 + 8.25 0.000 Intergenic Intergenic -63178 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr2-4436 chr2 173652742 173652952 + 8.25 0.000 Intergenic Intergenic 297975 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chrX-3315 chrX 119072446 119072656 + 8.25 0.000 Intergenic AluY|SINE|Alu 78028 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr1-4271 chr1 5505394 5505604 + 8.25 0.000 Intergenic Intergenic 357242 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr6-8493 chr6 157343936 157344146 + 8.25 0.000 Intergenic Intergenic -19782 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr19-3024 chr19 50051032 50051242 + 8.25 0.000 non-coding (NR_027257, exon 1 of 3) non-coding (NR_027257, exon 1 of 3) 548 NR_138096 400710 Hs.628968 NR_027257 ENSG00000204666 LOC400710 - uncharacterized LOC400710 ncRNA chr4-4761 chr4 98820909 98821119 + 8.25 0.000 Intergenic L2c|LINE|L2 108119 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr1-10927 chr1 210693916 210694126 + 8.25 0.000 intron (NM_002238, intron 10 of 10) intron (NM_002238, intron 10 of 10) 364655 NM_001170580 55733 Hs.58650 NM_018194 ENSG00000054392 HHAT MART2|SKI1|Skn hedgehog acyltransferase protein-coding chr17-4436 chr17 43892089 43892299 + 8.25 0.000 intron (NM_001278372, intron 3 of 13) intron (NM_001278372, intron 3 of 13) 8430 NM_001278376 4355 Hs.514208 NM_005374 ENSG00000108852 MPP2 DLG2 membrane palmitoylated protein 2 protein-coding chr6-5461 chr6 159097195 159097405 + 8.25 0.000 Intergenic AluJb|SINE|Alu -52148 NM_152133 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chr21-1282 chr21 34284598 34284808 + 8.25 0.000 Intergenic Intergenic -79321 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr2-13412 chr2 141557247 141557457 + 8.25 0.000 intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 574349 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr12-2174 chr12 132724508 132724718 + 8.25 0.000 TTS (NM_015114) TTS (NM_015114) 13771 NM_138575 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr1-7002 chr1 168978453 168978663 + 8.25 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 108447 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr17-4923 chr17 76029714 76029924 + 8.25 0.000 Intergenic Intergenic -2513 NM_001988 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr12-3703 chr12 3461626 3461836 + 8.25 0.000 intron (NM_001256536, intron 1 of 9) intron (NM_001256536, intron 1 of 9) -29472 NM_019854 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr11-8082 chr11 35412531 35412741 + 8.25 0.000 intron (NM_001252652, intron 1 of 11) intron (NM_001252652, intron 1 of 11) 6922 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr11-9097 chr11 31942956 31943166 + 8.25 0.000 Intergenic Intergenic 98257 NR_120527 100506675 Hs.446169 NR_120526 ENSG00000254584 LOC100506675 - uncharacterized LOC100506675 ncRNA chr8-3604 chr8 142257637 142257847 + 8.25 0.000 intron (NM_001366901, intron 12 of 13) intron (NM_001366901, intron 12 of 13) 59386 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr1-11049 chr1 223899830 223900040 + 8.25 0.000 Intergenic AluSq|SINE|Alu -53963 NM_005426 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr5-5714 chr5 167853583 167853793 + 8.25 0.000 intron (NM_001080428, intron 1 of 24) intron (NM_001080428, intron 1 of 24) 98759 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr19-4172 chr19 40169346 40169556 + 8.25 0.000 Intergenic LTR12C|LTR|ERV1 -21975 NM_002446 4294 Hs.466743 NM_002446 ENSG00000130758 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding chr1-10072 chr1 93218252 93218462 + 8.25 0.000 intron (NM_001306076, intron 14 of 28) Tigger7|DNA|TcMar-Tigger 37641 NM_206886 343099 Hs.482873 NM_206886 ENSG00000122483 CCDC18 NY-SAR-41 coiled-coil domain containing 18 protein-coding chr7-7702 chr7 157397066 157397276 + 8.25 0.000 intron (NM_058246, intron 8 of 9) intron (NM_058246, intron 8 of 9) 60167 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr13-1348 chr13 48653037 48653247 + 8.25 0.000 promoter-TSS (NM_001308476) promoter-TSS (NM_001308476) -787 NM_001308465 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr1-11468 chr1 94729361 94729571 + 8.25 0.000 intron (NR_160784, intron 1 of 3) intron (NR_160784, intron 1 of 3) 16434 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr5-8150 chr5 101406754 101406964 + 8.25 0.000 Intergenic L1PB2|LINE|L1 -503577 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr14-3613 chr14 54252118 54252328 + 8.25 0.000 Intergenic Intergenic -144645 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr16-4743 chr16 84559295 84559505 + 8.25 0.000 Intergenic Intergenic -54741 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr11-7204 chr11 133771377 133771587 + 8.25 0.000 Intergenic MSTA|LTR|ERVL-MaLR 38894 NR_120444 646522 Hs.560000 NR_120444 ENSG00000255258 LINC02743 - long intergenic non-protein coding RNA 2743 ncRNA chr16-3246 chr16 87195869 87196079 + 8.25 0.000 Intergenic Intergenic -16141 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr1-6723 chr1 62735836 62736046 + 8.25 0.000 Intergenic Intergenic -47555 NM_001272002 85440 Hs.744927 NM_033407 ENSG00000116641 DOCK7 EIEE23|ZIR2 dedicator of cytokinesis 7 protein-coding chr21-854 chr21 32263707 32263917 + 8.25 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 15237 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr13-3074 chr13 43028521 43028731 + 8.25 0.000 intron (NM_013238, intron 1 of 5) intron (NM_013238, intron 1 of 5) 5040 NM_013238 29103 Hs.438830 NM_013238 ENSG00000120675 DNAJC15 DNAJD1|HSD18|MCJ DnaJ heat shock protein family (Hsp40) member C15 protein-coding chr2-14591 chr2 232423048 232423258 + 8.25 0.000 Intergenic LTR5_Hs|LTR|ERVK 16309 NM_031313 251 Hs.333509 NM_031313 ENSG00000163286 ALPG ALPPL|ALPPL2|GCAP alkaline phosphatase, germ cell protein-coding chr9-5107 chr9 35620912 35621122 + 8.25 0.000 Intergenic LTR89|LTR|ERVL? -2604 NM_001782 971 Hs.116481 NM_001782 ENSG00000137101 CD72 CD72b|LYB2 CD72 molecule protein-coding chr20-2149 chr20 37357236 37357446 + 8.25 0.000 intron (NM_198291, intron 1 of 13) intron (NM_198291, intron 1 of 13) 11213 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chrX-2764 chrX 130153799 130154009 + 8.25 0.000 intron (NR_132647, intron 1 of 15) MLT1A|LTR|ERVL-MaLR 11937 NM_004208 9131 Hs.424932 NM_004208 ENSG00000156709 AIFM1 AIF|CMT2D|CMTX4|COWCK|COXPD6|DFNX5|NADMR|NAMSD|PDCD8 apoptosis inducing factor mitochondria associated 1 protein-coding chr4-7459 chr4 69881691 69881901 + 8.25 0.000 Intergenic Intergenic -21651 NM_005420 6783 Hs.479898 NM_005420 ENSG00000109193 SULT1E1 EST|EST-1|ST1E1|STE sulfotransferase family 1E member 1 protein-coding chr13-3505 chr13 21001262 21001472 + 8.25 0.000 intron (NM_014572, intron 2 of 7) MLT1H2|LTR|ERVL-MaLR -51939 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr3-6679 chr3 130821003 130821213 + 8.25 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -29487 NM_001199181 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr9-3747 chr9 122112578 122112788 + 8.25 0.000 Intergenic Intergenic 7484 NR_039690 100616312 NR_039690 ENSG00000266583 MIR4478 mir-4478 microRNA 4478 ncRNA chr17-4932 chr17 77083693 77083903 + 8.25 0.000 Intergenic Intergenic -4845 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr11-10332 chr11 109794820 109795030 + 8.25 0.000 Intergenic Intergenic -298467 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr20-2871 chr20 62695428 62695638 + 8.25 0.000 Intergenic MIRb|SINE|MIR -13303 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr7-9103 chr7 106367107 106367317 + 8.25 0.000 Intergenic Intergenic -82229 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr4-4143 chr4 7845012 7845222 + 8.25 0.000 intron (NM_198595, intron 4 of 16) intron (NM_198595, intron 4 of 16) 27191 NM_001371090 chr5-1548 chr5 54825170 54825380 + 8.25 0.000 Intergenic Intergenic -81017 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr9-6970 chr9 107097337 107097547 + 8.25 0.000 intron (NR_126029, intron 2 of 4) AluSz|SINE|Alu 5546 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr19-1543 chr19 35141294 35141504 + 8.25 0.000 intron (NM_001278718, intron 4 of 7) CpG 1765 NM_001278718 5348 Hs.442498 NM_005031 ENSG00000266964 FXYD1 PLM FXYD domain containing ion transport regulator 1 protein-coding chr5-4820 chr5 59938484 59938694 + 8.25 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) -44863 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chrX-2351 chrX 65419963 65420173 + 8.25 0.000 Intergenic L1M3e|LINE|L1 -68667 NM_001010888 340554 Hs.21249 NM_001010888 ENSG00000102053 ZC3H12B CXorf32|MCPIP2 zinc finger CCCH-type containing 12B protein-coding chr17-3325 chr17 68006753 68006963 + 8.25 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -13252 NM_181656 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr5-7392 chr5 23356617 23356827 + 8.25 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -150887 NM_020227 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding chr22-2817 chr22 43228734 43228944 + 8.25 0.000 intron (NM_173050, intron 9 of 21) intron (NM_173050, intron 9 of 21) 16165 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr5-4014 chr5 32195664 32195874 + 8.25 0.000 Intergenic AluSx|SINE|Alu -21450 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr16-5157 chr16 2508074 2508284 + 8.25 0.000 Intergenic L1MB5|LINE|L1 -5547 NM_001198569 527 Hs.389107 NM_001694 ENSG00000185883 ATP6V0C ATP6C|ATP6L|ATPL|VATL|VPPC|Vma3 ATPase H+ transporting V0 subunit c protein-coding chr2-8021 chr2 69770340 69770550 + 8.25 0.000 intron (NM_001365496, intron 2 of 13) intron (NM_001365496, intron 2 of 13) 28311 NM_001365496 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr14-3177 chr14 70464318 70464528 + 8.25 0.000 Intergenic MER34D|LTR|ERV1 12249 NM_003813 8747 Hs.178748 NM_003813 ENSG00000139985 ADAM21 ADAM 21|ADAM31 ADAM metallopeptidase domain 21 protein-coding chr1-16503 chr1 229894417 229894627 + 8.25 0.000 promoter-TSS (NR_146475) promoter-TSS (NR_146475) -614 NR_146475 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr12-4817 chr12 56423141 56423351 + 8.25 0.000 intron (NR_138471, intron 18 of 28) intron (NR_138471, intron 18 of 28) 26180 NM_001330295 8914 Hs.118631 NM_003920 ENSG00000111602 TIMELESS TIM|TIM1|hTIM timeless circadian regulator protein-coding chr5-6894 chr5 131515092 131515302 + 8.25 0.000 intron (NM_016340, intron 7 of 27) intron (NM_016340, intron 7 of 27) 120032 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr8-6348 chr8 52197553 52197763 + 8.25 0.000 intron (NR_134310, intron 1 of 1) GA-rich|Low_complexity|Low_complexity 3296 NR_134310 101929341 Hs.147170 NR_134310 ENSG00000253551 LOC101929341 - uncharacterized LOC101929341 ncRNA chr9-4449 chr9 21193183 21193393 + 8.25 0.000 Intergenic L1PREC2|LINE|L1 -5689 NM_021068 3441 Hs.1510 NM_021068 ENSG00000236637 IFNA4 IFN-alpha4a|INFA4 interferon alpha 4 protein-coding chr9-5357 chr9 90162868 90163078 + 8.25 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -121474 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr7-5344 chr7 29168514 29168724 + 8.25 0.000 intron (NM_001293069, intron 2 of 13) L1ME1|LINE|L1 21438 NM_001371267 chr12-4015 chr12 38215642 38215852 + 8.25 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -101027 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr2-8327 chr2 107584561 107584771 + 8.25 0.000 Intergenic Intergenic 55247 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA chr9-6438 chr9 78221676 78221886 + 8.25 0.000 Intergenic Intergenic -14294 NM_001330694 84131 Hs.187621 NM_032171 ENSG00000148019 CEP78 C9orf81|CRDHL|IP63 centrosomal protein 78 protein-coding chr9-4317 chr9 125683775 125683985 + 8.25 0.000 intron (NM_001006619, intron 1 of 10) intron (NM_001006619, intron 1 of 10) 23328 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr17-5259 chr17 18171217 18171427 + 8.25 0.000 intron (NM_016239, intron 61 of 64) intron (NM_016239, intron 61 of 64) -12506 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr17-8279 chr17 67813891 67814101 + 8.25 0.000 Intergenic Intergenic -11507 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr10-5952 chr10 122333096 122333306 + 8.25 0.000 intron (NM_001318189, intron 13 of 15) intron (NM_001318189, intron 13 of 15) -41507 NM_001330178 59338 Hs.643512 NM_021622 ENSG00000107679 PLEKHA1 TAPP1 pleckstrin homology domain containing A1 protein-coding chr8-3913 chr8 41552270 41552480 + 8.25 0.000 intron (NR_125824, intron 1 of 2) intron (NR_125824, intron 1 of 2) 23114 NM_032336 84296 Hs.656996 NM_032336 ENSG00000147536 GINS4 SLD5 GINS complex subunit 4 protein-coding chr19-4009 chr19 3241115 3241325 + 8.25 0.000 intron (NR_033342, intron 1 of 12) AluSc5|SINE|Alu 15942 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chrX-1215 chrX 73563578 73563788 + 8.25 0.000 promoter-TSS (NR_029423) promoter-TSS (NR_029423) 535 NM_001300884 53344 Hs.496323 NM_001039840 ENSG00000204116 CHIC1 BRX cysteine rich hydrophobic domain 1 protein-coding chr6-5593 chr6 36830409 36830619 + 8.25 0.000 intron (NM_020939, intron 1 of 20) MamTip2|DNA|hAT-Tip100 8930 NM_001314017 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding KI270857.1-1 KI270857.1 997456 997666 + 8.25 0.000 NA NA NA NA chr13-2925 chr13 114299545 114299755 + 8.25 0.000 intron (NM_080687, intron 7 of 8) intron (NM_080687, intron 7 of 8) -14853 NM_001164145 283489 Hs.7542 NM_032436 ENSG00000198824 CHAMP1 C13orf8|CAMP|CHAMP|MRD40|ZNF828 chromosome alignment maintaining phosphoprotein 1 protein-coding chr8-2768 chr8 117044742 117044952 + 8.25 0.000 intron (NM_001172815, intron 2 of 10) intron (NM_001172815, intron 2 of 10) -90148 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr14-2418 chr14 62758801 62759011 + 8.25 0.000 intron (NM_172375, intron 9 of 9) intron (NM_172375, intron 9 of 9) 286552 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr13-3254 chr13 34545827 34546037 + 8.25 0.000 intron (NR_047036, intron 1 of 2) intron (NR_047036, intron 1 of 2) 94753 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr12-8054 chr12 115771117 115771327 + 8.25 0.000 Intergenic LTR16E1|LTR|ERVL 377432 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr15-3464 chr15 93899915 93900125 + 8.25 0.000 promoter-TSS (NR_120322) promoter-TSS (NR_120322) 579 NR_138083 283682 Hs.134687 NR_138083 LINC01579 - long intergenic non-protein coding RNA 1579 ncRNA chr4-6193 chr4 48261361 48261571 + 8.25 0.000 intron (NM_003215, intron 1 of 17) intron (NM_003215, intron 1 of 17) 8372 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr5-4379 chr5 174300074 174300284 + 8.25 0.000 Intergenic LTR78|LTR|ERV1 -36175 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr15-2828 chr15 39920773 39920983 + 8.25 0.000 promoter-TSS (NM_007223) promoter-TSS (NM_007223) 14 NM_007223 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr16-2883 chr16 89791875 89792085 + 8.25 0.000 exon (NM_001286167, exon 13 of 43) exon (NM_001286167, exon 13 of 43) 24667 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr11-6060 chr11 31667048 31667258 + 8.25 0.000 intron (NM_019040, intron 9 of 9) intron (NM_019040, intron 9 of 9) 133508 NM_001368930 5080 Hs.270303 NM_000280 ENSG00000007372 PAX6 AN|AN2|ASGD5|D11S812E|FVH1|MGDA|WAGR paired box 6 protein-coding chr20-3624 chr20 7303896 7304106 + 8.25 0.000 intron (NR_135005, intron 1 of 1) intron (NR_135005, intron 1 of 1) 3431 NR_135005 101929288 Hs.738005 NR_135005 ENSG00000261249 LINC01751 - long intergenic non-protein coding RNA 1751 ncRNA chr16-5655 chr16 68035000 68035210 + 8.25 0.000 intron (NM_017803, intron 2 of 16) L2a|LINE|L2 -11238 NM_018380 55794 Hs.458313 NM_018380 ENSG00000182810 DDX28 MDDX28 DEAD-box helicase 28 protein-coding chr1-9801 chr1 58368942 58369152 + 8.25 0.000 Intergenic LTR16C|LTR|ERVL -118500 NM_001353980 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr5-3841 chr5 118899228 118899438 + 8.25 0.000 intron (NM_001308081, intron 4 of 5) Tigger17a|DNA|TcMar-Tigger -75253 NR_128710 103504734 NR_128710 ENSG00000283475 MIR1244-4 hsa-mir-1244-4 microRNA 1244-4 ncRNA chr11-6769 chr11 86460290 86460500 + 8.25 0.000 intron (NR_147830, intron 8 of 13) intron (NR_147830, intron 8 of 13) 85508 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr20-4019 chr20 36520033 36520243 + 8.25 0.000 intron (NR_109939, intron 2 of 4) L1M4|LINE|L1 -21381 NM_181526 10398 Hs.504687 NM_006097 ENSG00000101335 MYL9 LC20|MLC-2C|MLC2|MRLC1|MYRL2 myosin light chain 9 protein-coding chr3-8570 chr3 153574542 153574752 + 8.25 0.000 intron (NR_146713, intron 4 of 6) intron (NR_146713, intron 4 of 6) 90152 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr4-4005 chr4 1369547 1369757 + 8.25 0.000 intron (NM_020894, intron 8 of 13) intron (NM_020894, intron 8 of 13) 22096 NM_001317935 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chr2-6819 chr2 60708982 60709192 + 8.25 0.000 Intergenic Intergenic -47181 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr5-2762 chr5 150523793 150524003 + 8.25 0.000 intron (NM_001301063, intron 2 of 13) intron (NM_001301063, intron 2 of 13) 15767 NM_001543 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr4-8107 chr4 125567861 125568071 + 8.25 0.000 Intergenic L1M1|LINE|L1 60707 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr14-3352 chr14 90492099 90492309 + 8.25 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 25005 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr1-9013 chr1 11187544 11187754 + 8.25 0.000 intron (NM_004958, intron 28 of 57) intron (NM_004958, intron 28 of 57) -1706 NM_021146 10218 Hs.146559 NM_021146 ENSG00000171819 ANGPTL7 AngX|CDT6|dJ647M16.1 angiopoietin like 7 protein-coding chr11-2951 chr11 74635666 74635876 + 8.25 0.000 intron (NM_001363597, intron 10 of 11) L2c|LINE|L2 43189 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr21-1531 chr21 45727633 45727843 + 8.25 0.000 intron (NM_001348238, intron 2 of 16) MER74A|LTR|ERVL -20276 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr7-4672 chr7 38538812 38539022 + 8.25 0.000 intron (NM_001635, intron 1 of 20) L2|LINE|L2 92456 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr8-3863 chr8 36221539 36221749 + 8.25 0.000 Intergenic AluYm1|SINE|Alu -511324 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr1-8238 chr1 30193237 30193447 + 8.25 0.000 Intergenic Intergenic -155730 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr22-2181 chr22 45399714 45399924 + 8.25 0.000 intron (NM_148674, intron 5 of 24) L1MC3|LINE|L1 13780 NM_148674 27127 Hs.334176 NM_148674 ENSG00000077935 SMC1B SMC1BETA|SMC1L2 structural maintenance of chromosomes 1B protein-coding chr5-4595 chr5 30692237 30692447 + 8.25 0.000 Intergenic Intergenic -501344 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr5-2649 chr5 6745644 6745854 + 8.25 0.000 intron (NM_001171805, intron 6 of 12) intron (NM_001171805, intron 6 of 12) 32317 NM_001171805 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr5-1829 chr5 95936452 95936662 + 8.25 0.000 intron (NM_012081, intron 2 of 11) AluJo|SINE|Alu 25294 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr2-7089 chr2 172947533 172947743 + 8.25 0.000 intron (NM_001282901, intron 1 of 24) intron (NM_001282901, intron 1 of 24) 19433 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr13-3970 chr13 62980413 62980623 + 8.25 0.000 Intergenic LTR16B1|LTR|ERVL -173159 NR_120403 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chrX-2105 chrX 24944948 24945158 + 8.25 0.000 intron (NM_016937, intron 36 of 36) MIR|SINE|MIR 70912 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr11-5931 chr11 15195090 15195300 + 8.25 0.000 intron (NM_001278316, intron 5 of 10) intron (NM_001278316, intron 5 of 10) 46093 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr11-10235 chr11 99979616 99979826 + 8.25 0.000 intron (NM_001243270, intron 7 of 23) intron (NM_001243270, intron 7 of 23) 423576 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr9-2467 chr9 34591717 34591927 + 8.25 0.000 Intergenic CpG-28203 -1682 NM_001207011 1271 Hs.129966 NM_001842 ENSG00000122756 CNTFR - ciliary neurotrophic factor receptor protein-coding chr11-2160 chr11 76210498 76210708 + 8.25 0.000 Intergenic CpG-4722 -4101 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr3-6955 chr3 162236205 162236415 + 8.25 0.000 Intergenic Intergenic 739502 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr7-8355 chr7 43955841 43956051 + 8.25 0.000 3' UTR (NM_015983, exon 7 of 7) 3' UTR (NM_015983, exon 7 of 7) 29510 NM_015983 51619 Hs.19196 NM_015983 ENSG00000078967 UBE2D4 HBUCE1 ubiquitin conjugating enzyme E2 D4 (putative) protein-coding chr7-4137 chr7 73485556 73485766 + 8.25 0.000 intron (NM_001370402, intron 6 of 18) L1MC4|LINE|L1 36632 NM_001370402 9031 Hs.743372 NM_023005 ENSG00000009954 BAZ1B WBSCR10|WBSCR9|WSTF bromodomain adjacent to zinc finger domain 1B protein-coding chr3-10839 chr3 165231577 165231787 + 8.25 0.000 intron (NR_125764, intron 1 of 5) intron (NR_125764, intron 1 of 5) 24722 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr18-1400 chr18 73669423 73669633 + 8.25 0.000 Intergenic Intergenic 344587 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr8-7167 chr8 123391654 123391864 + 8.25 0.000 intron (NM_014109, intron 1 of 27) intron (NM_014109, intron 1 of 27) 4688 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr18-3000 chr18 24648056 24648266 + 8.25 0.000 intron (NR_040033, intron 1 of 2) intron (NR_040033, intron 1 of 2) 19979 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr2-3995 chr2 86805254 86805464 + 8.25 0.000 intron (NM_001145873, intron 2 of 8) L1ME3Cz|LINE|L1 3037 NM_001145873 925 Hs.85258 NM_001768 ENSG00000153563 CD8A CD8|Leu2|p32 CD8a molecule protein-coding chr8-4368 chr8 101925920 101926130 + 8.25 0.000 intron (NM_001040624, intron 3 of 7) intron (NM_001040624, intron 3 of 7) -58407 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr5-4912 chr5 72552055 72552265 + 8.25 0.000 Intergenic Intergenic -4917 NR_105008 102503427 Hs.429280 NR_105008 LOC102503427 - uncharacterized LOC102503427 ncRNA chr13-2226 chr13 24513068 24513278 + 8.25 0.000 promoter-TSS (NM_006437) promoter-TSS (NM_006437) -395 NM_006437 143 Hs.744855 NM_006437 ENSG00000102699 PARP4 ADPRTL1|ARTD4|PARP-4|PARPL|PH5P|VAULT3|VPARP|VWA5C|p193 poly(ADP-ribose) polymerase family member 4 protein-coding chr5-5044 chr5 90700918 90701128 + 8.25 0.000 intron (NR_003149, intron 34 of 89) intron (NR_003149, intron 34 of 89) 142226 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr10-7040 chr10 80336298 80336508 + 8.25 0.000 intron (NM_001370157, intron 5 of 5) L2b|LINE|L2 -8342 NR_070309 84332 Hs.741500 NM_032372 ENSG00000133665 DYDC2 - DPY30 domain containing 2 protein-coding chr19-6312 chr19 9906085 9906295 + 8.25 0.000 intron (NM_058164, intron 1 of 5) intron (NM_058164, intron 1 of 5) 7611 NM_001304347 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr3-5048 chr3 38662676 38662886 + 8.25 0.000 Intergenic L1MA4|LINE|L1 -13094 NM_001354701 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr6-2608 chr6 125014351 125014561 + 8.25 0.000 intron (NM_152553, intron 3 of 8) L4_C_Mam|LINE|RTE-X 31088 NM_152553 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr1-14048 chr1 27850116 27850326 + 8.25 0.000 exon (NM_014110, exon 7 of 7) exon (NM_014110, exon 7 of 7) 15820 NR_002997 677774 Hs.689694 NR_002997 ENSG00000252947 SCARNA1 ACA35 small Cajal body-specific RNA 1 ncRNA chr1-7810 chr1 54010883 54011093 + 8.25 0.000 intron (NM_001276394, intron 2 of 3) L3|LINE|CR1 7198 NM_001010978 388633 Hs.439583 NM_001010978 ENSG00000203985 LDLRAD1 - low density lipoprotein receptor class A domain containing 1 protein-coding chr5-4690 chr5 39216555 39216765 + 8.25 0.000 intron (NM_001349333, intron 1 of 19) intron (NM_001349333, intron 1 of 19) 2903 NM_001465 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr6-4724 chr6 63543960 63544170 + 8.25 0.000 Intergenic Intergenic -27947 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr6-7714 chr6 88640812 88641022 + 8.25 0.000 intron (NM_001286428, intron 12 of 13) intron (NM_001286428, intron 12 of 13) -101548 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr8-7184 chr8 124273563 124273773 + 8.25 0.000 Intergenic AluSx1|SINE|Alu -26270 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr3-6767 chr3 142039128 142039338 + 8.25 0.000 intron (NM_001178139, intron 3 of 12) L1ME3G|LINE|L1 -10607 NM_006286 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr1-7460 chr1 66533118 66533328 + 8.25 0.000 promoter-TSS (NM_001350217) promoter-TSS (NM_001350217) -370 NM_001308203 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr7-6681 chr7 153255669 153255879 + 8.25 0.000 Intergenic LTR27C|LTR|ERV1 156460 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr6-6899 chr6 12857652 12857862 + 8.25 0.000 intron (NM_001322308, intron 3 of 13) intron (NM_001322308, intron 3 of 13) -99599 NM_001322311 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr5-7035 chr5 166793743 166793953 + 8.25 0.000 Intergenic MER44B|DNA|TcMar-Tigger 132522 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr16-4716 chr16 82391668 82391878 + 8.25 0.000 Intergenic L2a|LINE|L2 -221549 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr8-5821 chr8 4517186 4517396 + 8.25 0.000 intron (NM_033225, intron 2 of 69) MIRb|SINE|MIR 477623 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr10-2739 chr10 114633170 114633380 + 8.25 0.000 promoter-TSS (NM_001352441) promoter-TSS (NM_001352441) -878 NM_001352440 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr9-2666 chr9 37429463 37429673 + 8.25 0.000 intron (NM_012203, intron 5 of 8) intron (NM_012203, intron 5 of 8) 6872 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr5-1866 chr5 140341753 140341963 + 8.25 0.000 intron (NM_001945, intron 3 of 5) intron (NM_001945, intron 3 of 5) 4745 NM_001945 1839 Hs.799 NM_001945 ENSG00000113070 HBEGF DTR|DTS|DTSF|HEGFL heparin binding EGF like growth factor protein-coding chr4-2150 chr4 82614195 82614405 + 8.25 0.000 intron (NR_024088, intron 2 of 3) intron (NR_024088, intron 2 of 3) 7137 NR_024087 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr10-5813 chr10 109943363 109943573 + 8.25 0.000 Intergenic Intergenic -19915 NM_001167604 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr2-8314 chr2 105991463 105991673 + 8.25 0.000 Intergenic HERVK14-int|LTR|ERVK -74120 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding chr3-9782 chr3 71566883 71567093 + 8.25 0.000 intron (NR_146142, intron 2 of 19) intron (NR_146142, intron 2 of 19) 16740 NM_001244808 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr7-7430 chr7 76373531 76373741 + 8.25 0.000 Intergenic Intergenic -14645 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|EIEE56|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding chr13-2662 chr13 82617528 82617738 + 8.25 0.000 Intergenic L1ME3A|LINE|L1 1264760 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr1-16644 chr1 240283176 240283386 + 8.25 0.000 intron (NM_020066, intron 7 of 17) intron (NM_020066, intron 7 of 17) 191398 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr17-8410 chr17 75730225 75730435 + 8.25 0.000 exon (NM_000213, exon 8 of 40) exon (NM_000213, exon 8 of 40) 5634 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr19-5821 chr19 40396178 40396388 + 8.25 0.000 exon (NM_181882, exon 7 of 7) exon (NM_181882, exon 7 of 7) -6102 NM_144685 147746 Hs.79363 NM_144685 ENSG00000160396 HIPK4 - homeodomain interacting protein kinase 4 protein-coding chr1-10336 chr1 153539617 153539827 + 8.25 0.000 intron (NM_002962, intron 3 of 3) intron (NM_002962, intron 3 of 3) 2043 NM_002962 6276 Hs.2960 NM_002962 ENSG00000196420 S100A5 S100D S100 calcium binding protein A5 protein-coding chr11-3181 chr11 63945802 63946012 + 8.25 0.000 exon (NM_001300800, exon 2 of 8) exon (NM_001300800, exon 2 of 8) 6576 NM_001300800 79829 Hs.523753 NM_024771 ENSG00000110583 NAA40 NAT11|NatD|PATT1|hNatD N(alpha)-acetyltransferase 40, NatD catalytic subunit protein-coding chr4-7748 chr4 93366378 93366588 + 8.25 0.000 intron (NM_001286838, intron 7 of 14) MER11C|LTR|ERVK -462270 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr7-3206 chr7 128891498 128891708 + 8.25 0.000 intron (NM_001366122, intron 17 of 39) intron (NM_001366122, intron 17 of 39) 19106 NM_199349 375616 Hs.371746 NM_199349 ENSG00000135253 KCP CRIM2|KCP1|NET67 kielin cysteine rich BMP regulator protein-coding chr12-5324 chr12 113985788 113985998 + 8.25 0.000 Intergenic Intergenic -19568 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr3-3500 chr3 12938977 12939187 + 8.25 0.000 intron (NM_001330619, intron 2 of 12) intron (NM_001330619, intron 2 of 12) 28648 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr6-6082 chr6 144957592 144957802 + 8.25 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 552042 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr15-2126 chr15 72187458 72187668 + 8.25 0.000 intron (NM_001012642, intron 1 of 11) AluSz6|SINE|Alu 10224 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr3-2236 chr3 45508163 45508373 + 8.25 0.000 intron (NR_048543, intron 1 of 3) intron (NR_048543, intron 1 of 3) 1277 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr2-5305 chr2 71787899 71788109 + 8.25 0.000 Intergenic Intergenic 321305 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr4-8316 chr4 144928128 144928338 + 8.25 0.000 Intergenic L1PA13|LINE|L1 169149 NM_001318367 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr1-10681 chr1 186593585 186593795 + 8.25 0.000 Intergenic L1PA14|LINE|L1 86733 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding chr1-14476 chr1 48025432 48025642 + 8.25 0.000 Intergenic MIRb|SINE|MIR -28152 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr3-3389 chr3 55265001 55265211 + 8.25 0.000 Intergenic Intergenic 86934 NR_147142 105377096 Hs.640507 NR_147142 ENSG00000243572 LINC02017 - long intergenic non-protein coding RNA 2017 ncRNA chr15-3020 chr15 57237344 57237554 + 8.25 0.000 intron (NM_207038, intron 12 of 19) intron (NM_207038, intron 12 of 19) 18019 NM_001306219 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr6-7013 chr6 22447108 22447318 + 8.25 0.000 Intergenic MIR1_Amn|SINE|MIR -122353 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr14-4721 chr14 59839937 59840147 + 8.25 0.000 intron (NM_021136, intron 1 of 8) intron (NM_021136, intron 1 of 8) 30734 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr2-11741 chr2 11054036 11054246 + 8.25 0.000 Intergenic Intergenic 78035 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr14-2988 chr14 51732138 51732348 + 8.25 0.000 Intergenic Intergenic 14960 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr13-3551 chr13 24537134 24537344 + 8.25 0.000 Intergenic L1M4|LINE|L1 4481 NR_158455 105370295 NR_158453 LOC105370295 - uncharacterized LOC105370295 ncRNA chr9-7302 chr9 9929878 9930088 + 8.25 0.000 intron (NM_002839, intron 5 of 45) intron (NM_002839, intron 5 of 45) 130591 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr4-2615 chr4 140150339 140150549 + 8.25 0.000 intron (NM_018717, intron 1 of 4) CpG 3740 NM_018717 55534 Hs.586165 NM_018717 ENSG00000196782 MAML3 CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3|mam-3 mastermind like transcriptional coactivator 3 protein-coding chr2-4893 chr2 127155188 127155398 + 8.25 0.000 Intergenic Intergenic -48139 NM_139345 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr20-3787 chr20 21724426 21724636 + 8.25 0.000 Intergenic Intergenic 18867 NM_006192 5075 Hs.122310 NM_006192 ENSG00000125813 PAX1 HUP48|OFC2 paired box 1 protein-coding chr7-5834 chr7 86131015 86131225 + 8.25 0.000 Intergenic LTR1D|LTR|ERV1 -512789 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chr2-6681 chr2 18499160 18499370 + 8.25 0.000 Intergenic L1PA13|LINE|L1 61388 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr8-4171 chr8 79879956 79880166 + 8.25 0.000 Intergenic L2b|LINE|L2 -8324 NR_110954 101927040 Hs.350876 NR_110954 ENSG00000249328 LOC101927040 - uncharacterized LOC101927040 ncRNA chr15-1866 chr15 62214090 62214300 + 8.25 0.000 Intergenic AluY|SINE|Alu -10877 NR_148210 107984784 Hs.591131 NR_148210 ENSG00000259697 LOC107984784 - uncharacterized LOC107984784 ncRNA chrX-3813 chrX 143069414 143069624 + 8.25 0.000 Intergenic Intergenic 43591 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr8-4221 chr8 86329230 86329440 + 8.25 0.000 Intergenic AluJr|SINE|Alu -13212 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr8-5596 chr8 93246223 93246433 + 8.25 0.000 Intergenic Intergenic -79478 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr2-7854 chr2 49041111 49041321 + 8.25 0.000 intron (NM_000145, intron 2 of 9) intron (NM_000145, intron 2 of 9) -18387 NR_107011 102465854 NR_107011 ENSG00000212036 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA chr10-6634 chr10 99029791 99030001 + 8.25 0.000 intron (NM_021828, intron 3 of 11) LTR13|LTR|ERVK -105328 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr1-16036 chr1 201047334 201047544 + 8.25 0.000 intron (NM_000069, intron 37 of 43) intron (NM_000069, intron 37 of 43) -23725 NM_001252100 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr4-5279 chr4 175075697 175075907 + 8.25 0.000 Intergenic MER105|DNA|hAT-Charlie 157444 NM_001130704 11086 Hs.126838 NM_014269 ENSG00000168594 ADAM29 CT73|svph1 ADAM metallopeptidase domain 29 protein-coding chr11-6199 chr11 45744228 45744438 + 8.25 0.000 Intergenic L2|LINE|L2 22025 NR_047569 100507384 Hs.259426 NR_047569 ENSG00000254519 LOC100507384 - uncharacterized LOC100507384 ncRNA chr17-1057 chr17 40062853 40063063 + 8.25 0.000 promoter-TSS (NM_001190918) promoter-TSS (NM_001190918) -7 NM_001190918 7067 Hs.724 NM_003250 ENSG00000126351 THRA AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1 thyroid hormone receptor alpha protein-coding chr2-8376 chr2 111743178 111743388 + 8.25 0.000 Intergenic (AAGA)n|Simple_repeat|Simple_repeat 27851 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr12-6272 chr12 45935579 45935789 + 8.25 0.000 intron (NM_004719, intron 6 of 14) intron (NM_004719, intron 6 of 14) 54890 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr6-7522 chr6 66978435 66978645 + 8.25 0.000 Intergenic ERVL-E-int|LTR|ERVL -1076811 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr1-11295 chr1 12206764 12206974 + 8.25 0.000 exon (NM_001066, exon 10 of 10) exon (NM_001066, exon 10 of 10) 15156 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr14-2632 chr14 64969666 64969876 + 8.25 0.000 intron (NM_001330182, intron 1 of 7) intron (NM_001330182, intron 1 of 7) 2565 NM_001308154 376267 Hs.512492 NM_198686 ENSG00000139998 RAB15 - RAB15, member RAS oncogene family protein-coding chrX-1781 chrX 76788189 76788399 + 8.25 0.000 intron (NR_110405, intron 1 of 2) L1PA15|LINE|L1 131066 NR_029909 494333 NR_029909 ENSG00000283242 MIR384 MIRN384|hsa-mir-384 microRNA 384 ncRNA chr11-6247 chr11 54910712 54910922 + 8.25 0.000 Intergenic ALR/Alpha|Satellite|centr 203985 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding chr2-5001 chr2 218856564 218856774 + 8.25 0.000 Intergenic Intergenic -3136 NM_006522 7475 Hs.29764 NM_006522 ENSG00000115596 WNT6 - Wnt family member 6 protein-coding chr20-3311 chr20 15549445 15549655 + 8.25 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 352710 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr22-2963 chr22 50045599 50045809 + 8.25 0.000 intron (NM_001350317, intron 7 of 13) intron (NM_001350317, intron 7 of 13) 12523 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr13-3797 chr13 45517536 45517746 + 8.25 0.000 intron (NM_031431, intron 17 of 22) intron (NM_031431, intron 17 of 22) 52702 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chr10-5197 chr10 60785966 60786176 + 8.25 0.000 3' UTR (NM_001170406, exon 4 of 4) 3' UTR (NM_001170406, exon 4 of 4) 7593 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr1-9947 chr1 78222754 78222964 + 8.25 0.000 Intergenic Intergenic -6740 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr1-12389 chr1 8410869 8411079 + 8.25 0.000 intron (NM_001042681, intron 12 of 22) intron (NM_001042681, intron 12 of 22) 12858 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr11-10038 chr11 82854713 82854923 + 8.25 0.000 intron (NM_001319214, intron 1 of 7) L1PA16|LINE|L1 45612 NM_005040 5547 Hs.523936 NM_005040 ENSG00000137509 PRCP HUMPCP|PCP prolylcarboxypeptidase protein-coding chr19-6598 chr19 28330906 28331116 + 8.25 0.000 Intergenic MIR3|SINE|MIR -275677 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr14-2755 chr14 102860836 102861046 + 8.25 0.000 intron (NM_145725, intron 2 of 11) MER41-int|LTR|ERV1 -61715 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr8-2210 chr8 10334755 10334965 + 8.25 0.000 intron (NM_001199729, intron 6 of 6) CpG -139705 NR_120604 101929191 Hs.595262 NR_120604 ENSG00000253641 LINCR-0001 - uncharacterized LINCR-0001 ncRNA chr16-5002 chr16 25808398 25808608 + 8.25 0.000 intron (NM_006040, intron 1 of 1) L1MD2|LINE|L1 116544 NM_006040 9951 Hs.655275 NM_006040 ENSG00000182601 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate-glucosamine 3-sulfotransferase 4 protein-coding chr18-1556 chr18 25996826 25997036 + 8.25 0.000 Intergenic Intergenic 93682 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chrX-2406 chrX 73874778 73874988 + 8.25 0.000 Intergenic L1PA15-16|LINE|L1 -22130 NR_001564 7503 Hs.529901 NR_001564 ENSG00000229807 XIST DXS1089|DXS399E|LINC00001|NCRNA00001|SXI1|swd66 X inactive specific transcript ncRNA chr1-14910 chr1 84029974 84030184 + 8.25 0.000 Intergenic ERVL-B4-int|LTR|ERVL -30947 NM_001350215 79739 Hs.445826 NM_024686 ENSG00000137941 TTLL7 - tubulin tyrosine ligase like 7 protein-coding chr7-3205 chr7 128848380 128848590 + 8.25 0.000 intron (NM_001127487, intron 26 of 46) intron (NM_001127487, intron 26 of 46) 14141 NR_149055 110806300 Hs.735929 NR_149055 ENSG00000242902 FLNC-AS1 - FLNC antisense RNA 1 ncRNA chr19-6474 chr19 17385429 17385639 + 8.25 0.000 Intergenic AluSx1|SINE|Alu -8192 NM_031310 83483 Hs.107125 NM_031310 ENSG00000130300 PLVAP DIAR10|FELS|PV-1|PV1|gp68 plasmalemma vesicle associated protein protein-coding chr4-8579 chr4 168569421 168569631 + 8.25 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) -62052 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr15-2681 chr15 78620303 78620513 + 8.25 0.000 intron (NR_046313, intron 1 of 7) CpG 588 NR_046313 1136 Hs.89605 NM_000743 ENSG00000080644 CHRNA3 LNCR2|NACHRA3|PAOD2 cholinergic receptor nicotinic alpha 3 subunit protein-coding chr9-5645 chr9 121473669 121473879 + 8.25 0.000 intron (NR_045211, intron 1 of 5) AluJb|SINE|Alu 26253 NR_045211 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr2-2099 chr2 240111918 240112128 + 8.25 0.000 Intergenic AluSc8|SINE|Alu 24282 NM_001163424 150678 Hs.293884 NM_138336 ENSG00000172428 COPS9 CSNAP|MYEOV2 COP9 signalosome subunit 9 protein-coding chr17-8273 chr17 67600058 67600268 + 8.25 0.000 intron (NM_181671, intron 5 of 9) intron (NM_181671, intron 5 of 9) -117670 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr1-7776 chr1 42484431 42484641 + 8.25 0.000 intron (NM_001355227, intron 3 of 18) intron (NM_001355227, intron 3 of 18) 21250 NM_001355227 728621 Hs.729640 NM_001080850 ENSG00000186409 CCDC30 PFD6L|PFDN6L coiled-coil domain containing 30 protein-coding chr1-4980 chr1 58932834 58933044 + 8.25 0.000 Intergenic Intergenic -87537 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr6-4080 chr6 141848608 141848818 + 8.25 0.000 Intergenic Intergenic 240086 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr11-4647 chr11 42020660 42020870 + 8.25 0.000 intron (NR_135065, intron 8 of 9) intron (NR_135065, intron 8 of 9) 64693 NR_135065 101928591 Hs.149771 NR_135065 LINC02745 - long intergenic non-protein coding RNA 2745 ncRNA chr6-3517 chr6 35534363 35534573 + 8.25 0.000 Intergenic Intergenic -21572 NM_003322 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr7-8174 chr7 30365453 30365663 + 8.25 0.000 intron (NM_147128, intron 4 of 4) intron (NM_147128, intron 4 of 4) -4492 NR_002186 222161 Hs.112423 NR_002186 DKFZP586I1420 - uncharacterized protein DKFZp586I1420 pseudo chr10-5509 chr10 82554686 82554896 + 8.25 0.000 intron (NR_163253, intron 3 of 10) intron (NR_163253, intron 3 of 10) -321871 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr19-2873 chr19 16206998 16207208 + 8.25 0.000 intron (NM_032493, intron 3 of 11) L2|LINE|L2 9192 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr16-4654 chr16 75312832 75313042 + 8.25 0.000 intron (NM_006324, intron 5 of 6) MamSINE1|SINE|tRNA-RTE -44930 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr16-2147 chr16 34064586 34064796 + 8.25 0.000 Intergenic Intergenic -98887 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA GL000009.2-4 GL000009.2 85930 86140 + 8.25 0.000 NA NA NA NA chr5-1695 chr5 91380835 91381045 + 8.25 0.000 promoter-TSS (NM_001329670) promoter-TSS (NM_001329670) 593 NR_027435 100129716 Hs.116364 NR_027435 ENSG00000281357 ARRDC3-AS1 - ARRDC3 antisense RNA 1 ncRNA chr10-6236 chr10 64273512 64273722 + 8.25 0.000 Intergenic AluSz6|SINE|Alu -551911 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr2-4238 chr2 219439431 219439641 + 8.25 0.000 intron (NM_005876, intron 1 of 40) intron (NM_005876, intron 1 of 40) 4693 NM_005876 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr4-7447 chr4 69046816 69047026 + 8.25 0.000 Intergenic L1PB2|LINE|L1 -4343 NM_001349568 7364 Hs.654424 NM_001074 ENSG00000171234 UGT2B7 UDPGT 2B7|UDPGT 2B9|UDPGT2B7|UDPGTH2|UDPGTh-2|UGT2B9 UDP glucuronosyltransferase family 2 member B7 protein-coding chr11-7273 chr11 31582761 31582971 + 8.25 0.000 intron (NM_001288725, intron 3 of 10) intron (NM_001288725, intron 3 of 10) 73099 NM_019040 26610 Hs.175534 NM_019040 ENSG00000109911 ELP4 AN|AN2|C11orf19|PAX6NEB|PAXNEB|dJ68P15A.1|hELP4 elongator acetyltransferase complex subunit 4 protein-coding chr10-6962 chr10 67312697 67312907 + 8.25 0.000 intron (NM_001127384, intron 5 of 17) intron (NM_001127384, intron 5 of 17) 90608 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr12-5259 chr12 109597847 109598057 + 8.25 0.000 3' UTR (NM_001114185, exon 11 of 11) 3' UTR (NM_001114185, exon 11 of 11) 24158 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr17-8270 chr17 67232127 67232337 + 8.25 0.000 intron (NM_001330447, intron 3 of 32) AluSg|SINE|Alu -12544 NR_136398 101928021 Hs.569824 NR_136398 LOC101928021 - uncharacterized LOC101928021 ncRNA chrX-1550 chrX 46443889 46444099 + 8.25 0.000 Intergenic Intergenic -3195 NM_001129900 55634 Hs.632800 NM_017776 ENSG00000147121 KRBOX4 ZNF673 KRAB box domain containing 4 protein-coding chr10-3674 chr10 102451503 102451713 + 8.25 0.000 promoter-TSS (NM_001363580) promoter-TSS (NM_001363580) -65 NM_001363580 79946 Hs.225084 NM_024886 C10orf95 - chromosome 10 open reading frame 95 protein-coding chr8-3975 chr8 51588805 51589015 + 8.25 0.000 intron (NM_144651, intron 3 of 22) MSTD|LTR|ERVL-MaLR 220535 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chrX-2142 chrX 34585582 34585792 + 8.25 0.000 Intergenic Intergenic 71598 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr7-7473 chr7 95209797 95210007 + 8.25 0.000 intron (NM_001166160, intron 7 of 19) intron (NM_001166160, intron 7 of 19) 114630 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr1-6920 chr1 150995855 150996065 + 8.25 0.000 TTS (NM_003568) TTS (NM_003568) 10837 NM_001163260 55793 Hs.743952 NM_018379 ENSG00000143409 MINDY1 FAM63A|MINDY-1 MINDY lysine 48 deubiquitinase 1 protein-coding chr7-6982 chr7 107786040 107786250 + 8.25 0.000 intron (NM_000111, intron 8 of 20) intron (NM_000111, intron 8 of 20) 17088 NM_000111 1811 Hs.1650 NM_000111 ENSG00000091138 SLC26A3 CLD|DRA solute carrier family 26 member 3 protein-coding chr6-3202 chr6 132558135 132558345 + 8.25 0.000 Intergenic L1MEg|LINE|L1 5556 NM_053278 83551 Hs.350571 NM_053278 ENSG00000146385 TAAR8 GPR102|TA5|TAR5|TRAR5|TaR-5|TaR-8 trace amine associated receptor 8 protein-coding chr18-1856 chr18 24603754 24603964 + 8.25 0.000 Intergenic AluSx1|SINE|Alu -24323 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr14-4195 chr14 90048388 90048598 + 8.25 0.000 Intergenic Intergenic -13501 NM_022054 56659 Hs.510191 NM_022054 ENSG00000152315 KCNK13 K2p13.1|THIK-1|THIK1 potassium two pore domain channel subfamily K member 13 protein-coding chr4-5400 chr4 3102847 3103057 + 8.25 0.000 intron (NM_002111, intron 3 of 66) intron (NM_002111, intron 3 of 66) 28271 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chrX-2095 chrX 23807676 23807886 + 8.25 0.000 Intergenic Intergenic 24623 NM_002970 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr9-6041 chr9 136391867 136392077 + 8.25 0.000 exon (NM_003086, exon 9 of 23) exon (NM_003086, exon 9 of 23) 6465 NM_003086 6621 Hs.113265 NM_003086 ENSG00000165684 SNAPC4 PTFalpha|SNAP190 small nuclear RNA activating complex polypeptide 4 protein-coding chr10-3992 chr10 128029826 128030036 + 8.25 0.000 intron (NM_001323354, intron 1 of 19) intron (NM_001323354, intron 1 of 19) -17681 NM_001323357 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chrX-2959 chrX 155655998 155656208 + 8.25 0.000 intron (NM_001304990, intron 1 of 2) L1P3|LINE|L1 -43151 NM_018196 55217 Hs.133321 NM_018196 ENSG00000185973 TMLHE AUTSX6|BBOX2|TMLD|TMLH|TMLHED|XAP130 trimethyllysine hydroxylase, epsilon protein-coding chr3-7918 chr3 142779694 142779904 + 8.25 0.000 intron (NM_001251845, intron 5 of 12) intron (NM_001251845, intron 5 of 12) 55375 NM_003304 7220 Hs.250687 NM_003304 ENSG00000144935 TRPC1 HTRP-1|TRP1 transient receptor potential cation channel subfamily C member 1 protein-coding chr14-2035 chr14 62778710 62778920 + 8.25 0.000 intron (NM_172375, intron 9 of 9) intron (NM_172375, intron 9 of 9) 266643 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr6-6651 chr6 158756780 158756990 + 8.25 0.000 intron (NM_001242394, intron 13 of 17) intron (NM_001242394, intron 13 of 17) 7868 NR_037482 100500851 NR_037482 ENSG00000265558 MIR3918 mir-3918 microRNA 3918 ncRNA chr2-3459 chr2 128418911 128419121 + 8.25 0.000 Intergenic SVA_F|Retroposon|SVA -100148 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr6-7490 chr6 62329244 62329454 + 8.25 0.000 Intergenic Intergenic -43122 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr21-697 chr21 28375800 28376010 + 8.25 0.000 Intergenic L1PB2|LINE|L1 -147238 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr1-7831 chr1 65747469 65747679 + 8.25 0.000 Intergenic L1MA4|LINE|L1 -44936 NM_001297440 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr21-711 chr21 33194855 33195065 + 8.25 0.000 Intergenic L2a|LINE|L2 -24724 NR_024102 728409 Hs.125234 NR_024102 ENSG00000229086 LINC01548 C21orf54 long intergenic non-protein coding RNA 1548 ncRNA chr19-4852 chr19 38506080 38506290 + 8.25 0.000 intron (NM_001042723, intron 54 of 104) intron (NM_001042723, intron 54 of 104) 72485 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr7-2868 chr7 115679992 115680202 + 8.25 0.000 Intergenic Intergenic -98656 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr9-6903 chr9 90872026 90872236 + 8.25 0.000 intron (NM_001174167, intron 7 of 13) intron (NM_001174167, intron 7 of 13) 44711 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr8-6114 chr8 28257717 28257927 + 8.25 0.000 Intergenic Intergenic -59446 NM_006228 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr6-6259 chr6 34383877 34384087 + 8.25 0.000 intron (NM_001202470, intron 5 of 8) intron (NM_001202470, intron 5 of 8) 8687 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr1-8371 chr1 67271636 67271846 + 8.25 0.000 Intergenic Intergenic -35623 NM_001258216 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr3-6216 chr3 64577659 64577869 + 8.25 0.000 intron (NM_001318781, intron 27 of 38) intron (NM_001318781, intron 27 of 38) 16418 NR_110150 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr12-5502 chr12 127778045 127778255 + 8.25 0.000 Intergenic Intergenic -103467 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chr10-4037 chr10 18918548 18918758 + 8.25 0.000 Intergenic MER5A1|DNA|hAT-Charlie -130148 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr1-13134 chr1 201096840 201097050 + 8.25 0.000 intron (NM_000069, intron 2 of 43) L2|LINE|L2 15481 NM_000069 779 Hs.1294 NM_000069 ENSG00000081248 CACNA1S CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP calcium voltage-gated channel subunit alpha1 S protein-coding chr7-7323 chr7 45990669 45990879 + 8.25 0.000 Intergenic Intergenic -69502 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr4-5723 chr4 41878276 41878486 + 8.25 0.000 Intergenic CpG 4230 NR_104143 101927074 Hs.611425 NR_104143 ENSG00000245870 LINC00682 - long intergenic non-protein coding RNA 682 ncRNA chr20-2175 chr20 45948969 45949179 + 8.25 0.000 exon (NM_022095, exon 28 of 28) exon (NM_022095, exon 28 of 28) 14391 NM_022104 63935 Hs.472856 NM_022104 ENSG00000100982 PCIF1 C20orf67|CAPAM|PPP1R121|hCAPAM|hPCIF1 PDX1 C-terminal inhibiting factor 1 protein-coding chr3-8904 chr3 12629544 12629754 + 8.25 0.000 intron (NM_001354691, intron 1 of 16) intron (NM_001354691, intron 1 of 16) 33859 NM_001354690 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr19-4629 chr19 14541016 14541226 + 8.25 0.000 intron (NM_138501, intron 1 of 12) AluSq|SINE|Alu 11527 NM_138501 9524 Hs.515642 NM_004868 ENSG00000099797 TECR GPSN2|MRT14|SC2|TER trans-2,3-enoyl-CoA reductase protein-coding chr20-4357 chr20 55942333 55942543 + 8.25 0.000 Intergenic L1PB1|LINE|L1 63081 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr7-3965 chr7 134039906 134040116 + 8.25 0.000 intron (NM_021807, intron 17 of 17) intron (NM_021807, intron 17 of 17) -87329 NM_001365700 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr10-5927 chr10 120278170 120278380 + 8.25 0.000 Intergenic Intergenic 76948 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr5-3101 chr5 44022955 44023165 + 8.25 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -365672 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chrX-3067 chrX 112295277 112295487 + 8.25 0.000 intron (NM_001004308, intron 2 of 2) intron (NM_001004308, intron 2 of 2) 212357 NM_001004308 340595 Hs.368140 NM_001004308 ENSG00000187823 RTL4 Mar4|Mart4|SIRH11|ZCCHC16 retrotransposon Gag like 4 protein-coding chr17-4643 chr17 15155734 15155944 + 8.25 0.000 Intergenic Intergenic -49652 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr9-5314 chr9 86604651 86604861 + 8.25 0.000 Intergenic Intergenic -250346 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr15-2193 chr15 88994122 88994332 + 8.25 0.000 Intergenic LTR12B|LTR|ERV1 -80848 NM_005928 4240 Hs.3745 NM_005928 ENSG00000140545 MFGE8 BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47 milk fat globule-EGF factor 8 protein protein-coding chr20-3496 chr20 62375115 62375325 + 8.25 0.000 Intergenic Intergenic -7908 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr19-3073 chr19 4186611 4186821 + 8.25 0.000 intron (NM_133475, intron 2 of 21) intron (NM_133475, intron 2 of 21) 3362 NM_133475 170961 Hs.197872 NM_133475 ENSG00000089847 ANKRD24 - ankyrin repeat domain 24 protein-coding chr17-5657 chr17 50125191 50125401 + 8.25 0.000 intron (NM_174920, intron 1 of 10) intron (NM_174920, intron 1 of 10) 4864 NM_174920 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr9-2288 chr9 130762828 130763038 + 8.25 0.000 intron (NM_007313, intron 1 of 10) AluY|SINE|Alu 49052 NM_007313 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr12-5448 chr12 123201556 123201766 + 8.25 0.000 intron (NR_103517, intron 11 of 23) AluJr|SINE|Alu 31480 NM_022782 10198 Hs.577404 NM_022782 ENSG00000051825 MPHOSPH9 MPP-9|MPP9 M-phase phosphoprotein 9 protein-coding chr11-7890 chr11 126188230 126188440 + 8.25 0.000 Intergenic Intergenic 23315 NM_032795 84881 Hs.150458 NM_032795 ENSG00000165526 RPUSD4 - RNA pseudouridine synthase D4 protein-coding chr7-9208 chr7 116896653 116896863 + 8.25 0.000 intron (NM_006136, intron 3 of 9) intron (NM_006136, intron 3 of 9) 34171 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr5-8728 chr5 144904981 144905191 + 8.25 0.000 Intergenic Intergenic 699695 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr22-3979 chr22 38297681 38297891 + 8.25 0.000 intron (NM_001894, intron 7 of 10) intron (NM_001894, intron 7 of 10) 19647 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr2-12544 chr2 67728571 67728781 + 8.25 0.000 Intergenic Intergenic 96886 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr16-3271 chr16 88604224 88604434 + 8.25 0.000 intron (NM_001294340, intron 7 of 18) AluSz6|SINE|Alu 33926 NM_001294340 124245 Hs.93670 NM_144604 ENSG00000158545 ZC3H18 NHN1 zinc finger CCCH-type containing 18 protein-coding chr10-8322 chr10 78830385 78830595 + 8.25 0.000 Intergenic Intergenic 236958 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr16-3823 chr16 56932677 56932887 + 8.25 0.000 intron (NM_001010989, intron 1 of 7) intron (NM_001010989, intron 1 of 7) 640 NM_014685 9709 Hs.146393 NM_014685 ENSG00000051108 HERPUD1 HERP|Mif1|SUP homocysteine inducible ER protein with ubiquitin like domain 1 protein-coding chr9-5096 chr9 34953258 34953468 + 8.25 0.000 Intergenic AluJr|SINE|Alu -4124 NM_001304333 23349 Hs.7989 NM_015297 ENSG00000122733 PHF24 - PHD finger protein 24 protein-coding chr19-3867 chr19 19507405 19507615 + 8.25 0.000 3' UTR (NM_001300946, exon 13 of 13) 3' UTR (NM_001300946, exon 13 of 13) 8038 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr2-11772 chr2 13162896 13163106 + 8.25 0.000 Intergenic (CAAAA)n|Simple_repeat|Simple_repeat -155988 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr5-8157 chr5 102451128 102451338 + 8.25 0.000 intron (NM_173488, intron 6 of 13) L1PA15|LINE|L1 47768 NM_173488 133482 Hs.388874 NM_173488 ENSG00000205359 SLCO6A1 CT48|GST|OATP-I|OATP6A1|OATPY solute carrier organic anion transporter family member 6A1 protein-coding chr6-6706 chr6 763664 763874 + 8.25 0.000 Intergenic Intergenic -70628 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr7-5506 chr7 43901652 43901862 + 8.25 0.000 intron (NM_001077664, intron 1 of 5) intron (NM_001077664, intron 1 of 5) 4839 NM_001204871 100534592 NM_001204871 ENSG00000270617 URGCP-MRPS24 - URGCP-MRPS24 readthrough protein-coding chr4-5898 chr4 134532691 134532901 + 8.25 0.000 intron (NR_147155, intron 3 of 3) MER57A-int|LTR|ERV1 108928 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr3-3122 chr3 149553666 149553876 + 8.25 0.000 intron (NM_001348362, intron 6 of 9) intron (NM_001348362, intron 6 of 9) 79074 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr17-8271 chr17 67412000 67412210 + 8.25 0.000 intron (NM_181671, intron 1 of 9) MIRb|SINE|MIR 34824 NM_181671 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein cytoplasmic 1 protein-coding chr9-6947 chr9 98290697 98290907 + 8.25 0.000 intron (NM_005458, intron 18 of 18) intron (NM_005458, intron 18 of 18) -35153 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr9-5016 chr9 26538706 26538916 + 8.25 0.000 Intergenic Intergenic 353991 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr5-3832 chr5 108476577 108476787 + 8.25 0.000 Intergenic AluJb|SINE|Alu -94584 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr8-5685 chr8 122846142 122846352 + 8.25 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 64592 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr17-6453 chr17 14954766 14954976 + 8.25 0.000 Intergenic Intergenic -59934 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr7-3019 chr7 73698885 73699095 + 8.25 0.000 TTS (NM_004603) TTS (NM_004603) -12327 NR_036247 100422948 NR_036247 ENSG00000265724 MIR4284 mir-4284 microRNA 4284 ncRNA chr19-4604 chr19 12912385 12912595 + 8.25 0.000 intron (NM_001105578, intron 2 of 5) intron (NM_001105578, intron 2 of 5) 6803 NM_001105578 256126 Hs.655173 NM_001105578 ENSG00000161860 SYCE2 CESC1 synaptonemal complex central element protein 2 protein-coding chr4-4283 chr4 25664575 25664785 + 8.25 0.000 intron (NM_001177999, intron 4 of 12) intron (NM_001177999, intron 4 of 12) 8216 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chrX-3808 chrX 140823610 140823820 + 8.25 0.000 Intergenic L1P4e|LINE|L1 -39157 NM_004065 1038 Hs.446675 NM_004065 ENSG00000184258 CDR1 CDR|CDR34|CDR62A cerebellar degeneration related protein 1 protein-coding chr8-6616 chr8 75470009 75470219 + 8.25 0.000 intron (NM_001330561, intron 1 of 11) intron (NM_001330561, intron 1 of 11) 62465 NM_001330561 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr11-7191 chr11 131201294 131201504 + 8.25 0.000 Intergenic MIRc|SINE|MIR -169216 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr10-8471 chr10 88456680 88456890 + 8.25 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 126533 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr4-2502 chr4 22542195 22542405 + 8.25 0.000 Intergenic Intergenic -26234 NM_145290 166647 Hs.99195 NM_145290 ENSG00000152990 ADGRA3 GPR125|PGR21|TEM5L adhesion G protein-coupled receptor A3 protein-coding chr19-5770 chr19 29829222 29829432 + 8.25 0.000 Intergenic Intergenic 17336 NM_001322262 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr3-10045 chr3 104410177 104410387 + 8.25 0.000 Intergenic Intergenic -886166 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr7-3680 chr7 47758724 47758934 + 8.25 0.000 Intergenic Intergenic -2647 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr19-4747 chr19 28754579 28754789 + 8.25 0.000 Intergenic L1PA13|LINE|L1 -26990 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr3-6922 chr3 157713465 157713675 + 8.25 0.000 Intergenic Intergenic 170226 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr6-4112 chr6 154197504 154197714 + 8.25 0.000 intron (NM_015553, intron 10 of 11) intron (NM_015553, intron 10 of 11) 107847 NM_001285528 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr18-3172 chr18 43309636 43309846 + 8.25 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -32251 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr10-8189 chr10 71647558 71647768 + 8.25 0.000 TTS (NM_052836) TTS (NM_052836) 72115 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr1-8868 chr1 3936060 3936270 + 8.25 0.000 Intergenic L1MD2|LINE|L1 -4447 NR_040065 728716 Hs.668359 NR_040065 LINC01346 - long intergenic non-protein coding RNA 1346 ncRNA chr3-8745 chr3 461266 461476 + 8.25 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -75576 NR_110739 101927193 Hs.677744 NR_110739 ENSG00000234661 CHL1-AS1 - CHL1 antisense RNA 1 ncRNA chr6-5548 chr6 169172619 169172829 + 8.25 0.000 Intergenic Intergenic -9735 NR_132623 101929484 Hs.364166 NR_132622 ENSG00000223485 LINC01615 - long intergenic non-protein coding RNA 1615 ncRNA chr20-1621 chr20 15475534 15475744 + 8.25 0.000 intron (NM_001351663, intron 7 of 17) intron (NM_001351663, intron 7 of 17) 278799 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr2-5260 chr2 58564569 58564779 + 8.25 0.000 intron (NR_033873, intron 1 of 13) MSTD|LTR|ERVL-MaLR 43921 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr1-6771 chr1 78114049 78114259 + 8.25 0.000 intron (NM_001304725, intron 3 of 5) intron (NM_001304725, intron 3 of 5) 68188 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr1-14986 chr1 90477110 90477320 + 8.25 0.000 Intergenic Intergenic -180535 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr9-8624 chr9 128940728 128940938 + 8.25 0.000 intron (NM_001100877, intron 8 of 9) intron (NM_001100877, intron 8 of 9) -6866 NM_015354 23511 Hs.308340 NM_015354 ENSG00000095319 NUP188 KIAA0169|hNup188 nucleoporin 188 protein-coding chr2-8670 chr2 149509760 149509970 + 8.25 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -77493 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr8-3224 chr8 135471543 135471753 + 8.25 0.000 intron (NM_006558, intron 1 of 8) intron (NM_006558, intron 1 of 8) 14192 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chrX-1078 chrX 137799411 137799621 + 8.25 0.000 Intergenic L1PA7|LINE|L1 233389 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr2-6789 chr2 47660035 47660245 + 8.25 0.000 Intergenic MER101-int|LTR|ERV1 -89809 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr20-2698 chr20 47317654 47317864 + 8.25 0.000 promoter-TSS (NR_024594) promoter-TSS (NR_024594) -743 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr7-8346 chr7 43278773 43278983 + 8.25 0.000 intron (NM_001287059, intron 2 of 27) L2a|LINE|L2 127983 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr10-3443 chr10 47013544 47013754 + 8.25 0.000 Intergenic Intergenic 101927 NM_001352533 26095 Hs.440733 NM_015605 ENSG00000204179 PTPN20 CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 protein tyrosine phosphatase non-receptor type 20 protein-coding chr22-2585 chr22 29446326 29446536 + 8.25 0.000 Intergenic AluSx1|SINE|Alu -4302 NR_002727 10740 Hs.167750 NR_002727 RFPL1S NCRNA00006|RFPL1-AS|RFPL1-AS1|RFPL1AS RFPL1 antisense RNA 1 ncRNA chr17-1680 chr17 1284415 1284625 + 8.25 0.000 intron (NM_172367, intron 1 of 2) (AGGCAAG)n|Simple_repeat|Simple_repeat 4858 NM_172367 286753 Hs.146059 NM_172367 ENSG00000184811 TRARG1 BEC-1|DSPB1|IFITMD3|LOST1|TUSC5 trafficking regulator of GLUT4 (SLC2A4) 1 protein-coding chr20-2783 chr20 54371031 54371241 + 8.25 0.000 Intergenic L1M2|LINE|L1 -104457 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr15-4959 chr15 78878408 78878618 + 8.25 0.000 intron (NM_006791, intron 2 of 11) intron (NM_006791, intron 2 of 11) 5524 NM_001265604 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chr8-7559 chr8 145031173 145031383 + 8.25 0.000 Intergenic HERVK14C-int|LTR|ERVK -21189 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding chr6-3684 chr6 156102045 156102255 + 8.25 0.000 Intergenic Intergenic 155353 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr14-3290 chr14 83957996 83958206 + 8.25 0.000 Intergenic AluSz|SINE|Alu -1313831 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr4-4501 chr4 60511899 60512109 + 8.25 0.000 Intergenic L1MA3|LINE|L1 -410615 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr11-7146 chr11 126733316 126733526 + 8.25 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) 77335 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr1-4450 chr1 2051303 2051513 + 8.25 0.000 intron (NM_002744, intron 1 of 17) CpG 997 NM_002744 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr15-2140 chr15 74025439 74025649 + 8.25 0.000 intron (NM_033247, intron 4 of 4) intron (NM_033247, intron 4 of 4) 30828 NM_033244 5371 Hs.526464 NM_002675 ENSG00000140464 PML MYL|PP8675|RNF71|TRIM19 promyelocytic leukemia protein-coding chr10-3890 chr10 60855757 60855967 + 8.25 0.000 Intergenic Intergenic 77384 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr17-8180 chr17 61981365 61981575 + 8.25 0.000 intron (NM_005121, intron 16 of 29) L2a|LINE|L2 -53488 NM_001351695 57508 Hs.279646 NM_020748 ENSG00000108506 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding chr1-5932 chr1 22957476 22957686 + 8.25 0.000 intron (NM_001289974, intron 6 of 7) L1ME4b|LINE|L1 15285 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr13-2586 chr13 72583815 72584025 + 8.25 0.000 Intergenic L2c|LINE|L2 143709 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chrX-1079 chrX 138255449 138255659 + 8.25 0.000 Intergenic MER39|LTR|ERV1 412239 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr5-3180 chr5 74895930 74896140 + 8.25 0.000 Intergenic Intergenic -29069 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr13-4320 chr13 101203029 101203239 + 8.25 0.000 intron (NM_001350749, intron 13 of 43) intron (NM_001350749, intron 13 of 43) 213374 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr4-5561 chr4 143700484 143700694 + 8.25 0.000 promoter-TSS (NM_001168235) promoter-TSS (NM_001168235) 86 NM_001168235 166752 Hs.252714 NM_001168235 ENSG00000183090 FREM3 - FRAS1 related extracellular matrix 3 protein-coding chr16-4813 chr16 86333616 86333826 + 8.25 0.000 non-coding (NR_024406, exon 5 of 7) non-coding (NR_024406, exon 5 of 7) 11958 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr6-5121 chr6 120872679 120872889 + 8.25 0.000 Intergenic MER52A|LTR|ERV1 461696 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr10-7412 chr10 4623842 4624052 + 8.25 0.000 Intergenic Intergenic -32209 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA chr8-4353 chr8 101071132 101071342 + 8.25 0.000 intron (NR_033962, intron 2 of 2) intron (NR_033962, intron 2 of 2) 19183 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr1-5876 chr1 3148073 3148283 + 8.25 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 20203 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr1-9394 chr1 31250571 31250781 + 8.25 0.000 Intergenic Intergenic -10789 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr6-3080 chr6 78881980 78882190 + 8.25 0.000 intron (NM_001010844, intron 1 of 3) L1MC3|LINE|L1 14534 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chrX-1546 chrX 45322454 45322664 + 8.25 0.000 Intergenic Intergenic -121683 NM_024689 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr9-6508 chr9 103018040 103018250 + 8.25 0.000 intron (NM_001340, intron 7 of 7) intron (NM_001340, intron 7 of 7) 22812 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr21-1646 chr21 24329766 24329976 + 8.25 0.000 Intergenic Intergenic -8494 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr3-6254 chr3 68931958 68932168 + 8.25 0.000 intron (NM_001005527, intron 1 of 5) CpG 484 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr17-5562 chr17 44790159 44790369 + 8.25 0.000 Intergenic AluSg|SINE|Alu 31276 NM_001318933 4185 Hs.6088 NM_002390 ENSG00000073670 ADAM11 MDC ADAM metallopeptidase domain 11 protein-coding chr2-11803 chr2 16841559 16841769 + 8.25 0.000 Intergenic Intergenic -175830 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr11-5945 chr11 16781235 16781445 + 8.25 0.000 intron (NM_001329630, intron 26 of 26) intron (NM_001329630, intron 26 of 26) 42693 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr7-5348 chr7 29388673 29388883 + 8.25 0.000 intron (NM_001293072, intron 3 of 12) intron (NM_001293072, intron 3 of 12) -90934 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr4-3975 chr4 624324 624534 + 8.25 0.000 Intergenic Intergenic -1145 NM_000283 5158 Hs.623810 NM_000283 ENSG00000133256 PDE6B CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1 phosphodiesterase 6B protein-coding chr2-8554 chr2 134018146 134018356 + 8.25 0.000 Intergenic Intergenic -101684 NM_001371457 chrX-2929 chrX 153421800 153422010 + 8.25 0.000 TTS (NM_001136273) TTS (NM_001136273) 3582 NM_001136273 139735 Hs.534554 NM_001136273 ENSG00000189420 ZFP92 ZNF897 ZFP92 zinc finger protein protein-coding chr9-5029 chr9 27850360 27850570 + 8.25 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -276599 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr7-9701 chr7 155282795 155283005 + 8.25 0.000 Intergenic Intergenic -14872 NM_001346590 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr12-2282 chr12 110297257 110297467 + 8.25 0.000 intron (NM_170665, intron 5 of 19) AluSc|SINE|Alu 16115 NM_170665 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr18-2643 chr18 43193595 43193805 + 8.25 0.000 Intergenic Intergenic -78008 NM_001272077 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chrX-3544 chrX 57220798 57221008 + 8.25 0.000 Intergenic HERVH48-int|LTR|ERV1 -65774 NM_174912 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding chr15-4596 chr15 60183284 60183494 + 8.25 0.000 Intergenic Intergenic 179078 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr10-5961 chr10 123262596 123262806 + 8.25 0.000 Intergenic MIR3|SINE|MIR 108299 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr3-5955 chr3 46331227 46331437 + 8.25 0.000 Intergenic HERVH-int|LTR|ERV1 -22412 NM_001123041 729230 Hs.511794 NM_001123041 ENSG00000121807 CCR2 CC-CKR-2|CCR-2|CCR2A|CCR2B|CD192|CKR2|CKR2A|CKR2B|CMKBR2|MCP-1-R C-C motif chemokine receptor 2 protein-coding chr12-4357 chr12 3309888 3310098 + 8.25 0.000 intron (NR_148995, intron 1 of 11) intron (NR_148995, intron 1 of 11) 56129 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr3-4847 chr3 154428799 154429009 + 8.25 0.000 exon (NM_001038705, exon 1 of 4) exon (NM_001038705, exon 1 of 4) 1286 NM_001038705 344758 Hs.376338 NM_001038705 ENSG00000174948 GPR149 IEDA|PGR10|R35 G protein-coupled receptor 149 protein-coding chr6-6641 chr6 156057931 156058141 + 8.25 0.000 Intergenic LTR16C|LTR|ERVL 111239 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr4-8457 chr4 155671190 155671400 + 8.25 0.000 intron (NM_000856, intron 3 of 10) intron (NM_000856, intron 3 of 10) 3633 NM_001130684 2982 Hs.24258 NM_000856 ENSG00000164116 GUCY1A1 GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6 guanylate cyclase 1 soluble subunit alpha 1 protein-coding chr16-4367 chr16 47412964 47413174 + 8.25 0.000 intron (NM_030790, intron 6 of 17) L1P4d|LINE|L1 47994 NM_030790 81533 Hs.42217 NM_030790 ENSG00000129636 ITFG1 2310047C21Rik|CDA08|LNKN-1|TIP integrin alpha FG-GAP repeat containing 1 protein-coding chr1-12948 chr1 151289079 151289289 + 8.25 0.000 exon (NM_001304763, exon 5 of 10) exon (NM_001304763, exon 5 of 10) 6885 NM_020832 57592 Hs.186756 NM_020832 ENSG00000143373 ZNF687 PDB6 zinc finger protein 687 protein-coding chr8-3858 chr8 33501234 33501444 + 8.25 0.000 TTS (NM_032509) TTS (NM_032509) 11796 NM_001330505 80185 Hs.77135 NM_025115 ENSG00000129696 TTI2 C8orf41|MRT39 TELO2 interacting protein 2 protein-coding chr1-10080 chr1 94247128 94247338 + 8.25 0.000 intron (NM_001328664, intron 1 of 22) intron (NM_001328664, intron 1 of 22) 513 NM_001328664 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr9-5586 chr9 113854394 113854604 + 8.25 0.000 Intergenic LTR33|LTR|ERVL -21783 NM_001318040 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr6-6438 chr6 98944762 98944972 + 8.25 0.000 intron (NM_001278716, intron 1 of 9) LTR40a|LTR|ERVL 3079 NR_103836 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr5-9021 chr5 167305882 167306092 + 8.25 0.000 intron (NM_001122679, intron 2 of 29) L2|LINE|L2 -137586 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr6-5136 chr6 123396237 123396447 + 8.25 0.000 intron (NM_001251987, intron 12 of 20) intron (NM_001251987, intron 12 of 20) -43262 NR_110844 101927990 Hs.660877 NR_110844 TRDN-AS1 HRAT13 TRDN antisense RNA 1 ncRNA chr2-7142 chr2 195962650 195962860 + 8.25 0.000 intron (NM_018897, intron 17 of 64) L1MA3|LINE|L1 106082 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr3-6226 chr3 65426058 65426268 + 8.25 0.000 intron (NM_001365904, intron 12 of 24) intron (NM_001365904, intron 12 of 24) -467653 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr4-1783 chr4 2436555 2436765 + 8.25 0.000 intron (NM_001193282, intron 2 of 15) intron (NM_001193282, intron 2 of 15) 17705 NM_001193282 402160 Hs.443116 NM_001193282 ENSG00000206113 CFAP99 - cilia and flagella associated protein 99 protein-coding chr11-8043 chr11 22039492 22039702 + 8.25 0.000 Intergenic MLT1I-int|LTR|ERVL-MaLR -153488 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr21-502 chr21 29305145 29305355 + 8.25 0.000 promoter-TSS (NR_027655) promoter-TSS (NR_027655) 46 NR_027655 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding chr2-14136 chr2 202734476 202734686 + 8.25 0.000 intron (NM_173511, intron 4 of 7) MIR|SINE|MIR 94653 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr3-5612 chr3 9574210 9574420 + 8.25 0.000 Intergenic LTR49-int|LTR|ERV1 -20493 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr17-8092 chr17 55584208 55584418 + 8.25 0.000 Intergenic MIR|SINE|MIR 138551 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr5-3354 chr5 137499093 137499303 + 8.25 0.000 5' UTR (NM_004598, exon 1 of 11) 5' UTR (NM_004598, exon 1 of 11) 128 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chrX-2611 chrX 107360453 107360663 + 8.25 0.000 Intergenic Intergenic 153926 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr19-3202 chr19 49398136 49398346 + 8.25 0.000 intron (NM_144688, intron 7 of 19) intron (NM_144688, intron 7 of 19) 9992 NM_144688 147872 Hs.662085 NM_144688 ENSG00000161609 CCDC155 KASH5 coiled-coil domain containing 155 protein-coding chr15-2706 chr15 89017492 89017702 + 8.25 0.000 Intergenic Intergenic -70859 NM_007011 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr22-1887 chr22 44643751 44643961 + 8.25 0.000 Intergenic Ricksha_0|DNA|MULE-MuDR -18437 NR_044991 414351 Hs.572878 NR_044991 LINC00229 C22orf10|NCRNA00229|dJ474I12.C22.2 long intergenic non-protein coding RNA 229 ncRNA chrX-4436 chrX 54737274 54737484 + 8.25 0.000 Intergenic SVA_B|Retroposon|SVA 60876 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr18-1832 chr18 22139434 22139644 + 8.25 0.000 Intergenic Intergenic 29429 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA chr14-2553 chr14 28026886 28027096 + 8.25 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -353770 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chr13-3640 chr13 31369312 31369522 + 8.25 0.000 Intergenic Intergenic 169442 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr7-5328 chr7 27091753 27091963 + 8.25 0.000 Intergenic Intergenic 4142 NM_153620 3198 Hs.67397 NM_005522 ENSG00000105991 HOXA1 BSAS|HOX1|HOX1F homeobox A1 protein-coding chr8-6736 chr8 88007795 88008005 + 8.25 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -133885 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr2-4137 chr2 169214769 169214979 + 8.25 0.000 intron (NM_004525, intron 35 of 78) intron (NM_004525, intron 35 of 78) 133767 NM_001142271 10170 Hs.179608 NM_005771 ENSG00000073737 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase 9 protein-coding chr14-4765 chr14 62934581 62934791 + 8.25 0.000 intron (NM_139318, intron 7 of 10) LTR81AB|LTR|Gypsy 110772 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr1-6644 chr1 45319867 45320077 + 8.25 0.000 Intergenic HERVH-int|LTR|ERV1 -6923 NM_032756 84842 Hs.162717 NM_032756 ENSG00000186603 HPDL 4-HPPD-L|GLOXD1 4-hydroxyphenylpyruvate dioxygenase like protein-coding chr15-3140 chr15 66767230 66767440 + 8.25 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 65099 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr6-6745 chr6 2650707 2650917 + 8.25 0.000 Intergenic L1ME1|LINE|L1 -16209 NR_131168 154386 Hs.680574 NM_152554 ENSG00000164385 LINC01600 C6orf195|bA145H9.2 long intergenic non-protein coding RNA 1600 ncRNA chr7-5660 chr7 57103307 57103517 + 8.25 0.000 Intergenic Intergenic 29024 NM_001370129 90827 Hs.616660 NM_033273 ENSG00000185177 ZNF479 HKr19|KR19 zinc finger protein 479 protein-coding chr14-3671 chr14 96052664 96052874 + 8.25 0.000 intron (NM_001282463, intron 2 of 2) intron (NM_001282463, intron 2 of 2) 13407 NM_001282463 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr18-1769 chr18 10058650 10058860 + 8.25 0.000 Intergenic L1PREC2|LINE|L1 144739 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr2-13133 chr2 117929626 117929836 + 8.25 0.000 intron (NM_019044, intron 23 of 23) intron (NM_019044, intron 23 of 23) 84339 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr1-12964 chr1 153928447 153928657 + 8.25 0.000 TTS (NM_001367466) TTS (NM_001367466) -5580 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr14-1727 chr14 51395629 51395839 + 8.25 0.000 intron (NR_146549, intron 1 of 3) intron (NR_146549, intron 1 of 3) 1401 NR_146549 105370496 Hs.578228 NR_146549 ENSG00000258808 LINC02310 - long intergenic non-protein coding RNA 2310 ncRNA chr10-7964 chr10 57888193 57888403 + 8.25 0.000 Intergenic Intergenic 379596 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr6-4475 chr6 36217449 36217659 + 8.25 0.000 intron (NM_015695, intron 8 of 12) intron (NM_015695, intron 8 of 12) 20810 NM_015695 27154 Hs.520096 NM_015695 ENSG00000096070 BRPF3 - bromodomain and PHD finger containing 3 protein-coding chr17-5363 chr17 30821657 30821867 + 8.25 0.000 intron (NM_015986, intron 1 of 7) L1MB7|LINE|L1 2930 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr7-6251 chr7 134625618 134625828 + 8.25 0.000 Intergenic Intergenic -21056 NM_199186 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chrX-2894 chrX 149060549 149060759 + 8.25 0.000 Intergenic MER45A|DNA|hAT-Tip100 341563 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr17-7955 chr17 47677987 47678197 + 8.25 0.000 exon (NM_001276453, exon 17 of 21) exon (NM_001276453, exon 17 of 21) -17172 NM_014726 9755 Hs.94790 NM_014726 ENSG00000198933 TBKBP1 ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding chr13-3629 chr13 30745163 30745373 + 8.25 0.000 intron (NM_001204406, intron 3 of 5) intron (NM_001204406, intron 3 of 5) 9760 NM_001629 241 Hs.507658 NM_001629 ENSG00000132965 ALOX5AP FLAP arachidonate 5-lipoxygenase activating protein protein-coding chr3-7987 chr3 179244873 179245083 + 8.25 0.000 intron (NM_171828, intron 2 of 3) MER5A|DNA|hAT-Charlie 6637 NM_014407 27094 Hs.591285 NM_014407 ENSG00000171121 KCNMB3 BKBETA3|HBETA3|K(VCA)BETA-3|KCNMB2|KCNMBL|SLO-BETA-3|SLOBETA3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 protein-coding chr22-3108 chr22 50597890 50598100 + 8.25 0.000 Intergenic AluJo|SINE|Alu -2798 NM_012324 23542 Hs.558180 NM_012324 ENSG00000008735 MAPK8IP2 IB-2|IB2|JIP2|PRKM8IPL mitogen-activated protein kinase 8 interacting protein 2 protein-coding chr5-2629 chr5 171770299 171770509 + 8.25 0.000 Intergenic L2b|LINE|L2 -15468 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr3-6437 chr3 102832660 102832870 + 8.25 0.000 Intergenic L1PA13|LINE|L1 397750 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr12-3360 chr12 94367816 94368026 + 8.25 0.000 TTS (NR_144441) TTS (NR_144441) 91946 NM_001346461 51134 Hs.279209 NM_016122 ENSG00000173588 CEP83 CCDC41|NPHP18|NY-REN-58 centrosomal protein 83 protein-coding chr10-6449 chr10 28401449 28401659 + 8.25 0.000 Intergenic Intergenic 94259 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chr16-1613 chr16 82638317 82638527 + 8.25 0.000 intron (NM_001220492, intron 1 of 5) MIRc|SINE|MIR 11453 NM_001220490 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr17-4465 chr17 57797768 57797978 + 8.25 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 52171 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr10-7198 chr10 111747367 111747577 + 8.25 0.000 Intergenic Intergenic 436293 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr5-5836 chr5 179121492 179121702 + 8.25 0.000 intron (NM_014244, intron 21 of 21) CpG 61224 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr3-5278 chr3 119810247 119810457 + 8.25 0.000 intron (NM_033013, intron 3 of 8) intron (NM_033013, intron 3 of 8) 27642 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding chr4-2473 chr4 3262810 3263020 + 8.25 0.000 Intergenic Intergenic 13756 NM_001042690 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr1-9361 chr1 29595841 29596051 + 8.25 0.000 Intergenic L1MDb|LINE|L1 -245832 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr4-6225 chr4 60260682 60260892 + 8.25 0.000 Intergenic Intergenic -661832 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr16-6165 chr16 24051370 24051580 + 8.25 0.000 intron (NM_002738, intron 5 of 16) MER74A|LTR|ERVL -151641 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr13-2455 chr13 49640270 49640480 + 8.25 0.000 Intergenic AluJo|SINE|Alu 11868 NM_138450 115761 Hs.558599 NM_138450 ENSG00000152213 ARL11 ARLTS1 ADP ribosylation factor like GTPase 11 protein-coding chr13-2703 chr13 91473120 91473330 + 8.25 0.000 intron (NM_004466, intron 2 of 7) THE1D|LTR|ERVL-MaLR 74604 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr12-2268 chr12 103745925 103746135 + 8.25 0.000 intron (NM_017564, intron 57 of 68) intron (NM_017564, intron 57 of 68) 95204 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr3-3631 chr3 111762983 111763193 + 8.25 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) 30592 NM_001134437 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr1-11298 chr1 15368403 15368613 + 8.25 0.000 intron (NM_052929, intron 24 of 30) intron (NM_052929, intron 24 of 30) -24625 NR_148919 101927417 Hs.715313 NR_148918 ENSG00000233485 LOC101927417 - uncharacterized LOC101927417 ncRNA chr2-11787 chr2 15363280 15363490 + 8.25 0.000 intron (NR_052013, intron 32 of 50) intron (NR_052013, intron 32 of 50) 197949 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr5-6191 chr5 61579584 61579794 + 8.25 0.000 Intergenic AluSx1|SINE|Alu -58071 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr14-2866 chr14 32458835 32459045 + 8.25 0.000 intron (NM_004274, intron 2 of 13) L1M8|LINE|L1 129642 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr12-3491 chr12 123264717 123264927 + 8.25 0.000 intron (NM_001270434, intron 3 of 3) intron (NM_001270434, intron 3 of 3) 3432 NM_001270434 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr2-11900 chr2 24105816 24106026 + 8.25 0.000 intron (NR_111929, intron 3 of 5) L1PREC2|LINE|L1 17413 NM_199346 375189 Hs.442718 NM_199346 ENSG00000176732 PFN4 - profilin family member 4 protein-coding chr14-5297 chr14 100931671 100931881 + 8.25 0.000 intron (NR_146000, intron 9 of 50) intron (NR_146000, intron 9 of 50) 1857 NR_003231 767563 NR_003231 ENSG00000201700 SNORD113-3 14q(I-3) small nucleolar RNA, C/D box 113-3 snoRNA chr12-3257 chr12 64941040 64941250 + 8.25 0.000 intron (NR_146276, intron 3 of 3) MER47A|DNA|TcMar-Tigger 51146 NR_146276 109729131 Hs.577553 NR_146276 ENSG00000248995 LINC02231 - long intergenic non-protein coding RNA 2231 ncRNA chr4-7374 chr4 60605923 60606133 + 8.25 0.000 Intergenic Intergenic -316591 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chrX-4978 chrX 116391812 116392022 + 8.25 0.000 Intergenic L1PA5|LINE|L1 -44689 NM_007231 11254 Hs.522109 NM_007231 ENSG00000268104 SLC6A14 BMIQ11 solute carrier family 6 member 14 protein-coding chr8-7252 chr8 128269545 128269755 + 8.25 0.000 Intergenic Intergenic 119534 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr4-3798 chr4 108456930 108457140 + 8.25 0.000 Intergenic Intergenic -100198 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chrX-4381 chrX 50639092 50639302 + 8.25 0.000 intron (NR_027121, intron 2 of 9) intron (NR_027121, intron 2 of 9) -168372 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr8-5909 chr8 17517169 17517379 + 8.25 0.000 intron (NM_001370338, intron 2 of 12) intron (NM_001370338, intron 2 of 12) 20186 NM_001008539 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr7-4497 chr7 155162020 155162230 + 8.25 0.000 Intergenic Intergenic -90568 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chr4-3952 chr4 173870120 173870330 + 8.25 0.000 Intergenic Intergenic -27048 NR_146487 101928478 NR_146487 ENSG00000250708 LINC02269 - long intergenic non-protein coding RNA 2269 ncRNA chr1-10722 chr1 195424753 195424963 + 8.25 0.000 Intergenic AluSz|SINE|Alu 663857 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr14-3536 chr14 104264938 104265148 + 8.25 0.000 intron (NR_146612, intron 1 of 2) intron (NR_146612, intron 1 of 2) 41459 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr10-4088 chr10 55320186 55320396 + 8.25 0.000 intron (NM_001354404, intron 2 of 34) L1PA15|LINE|L1 -278751 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding chr12-4925 chr12 68405606 68405816 + 8.25 0.000 Intergenic Intergenic 45773 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr14-3471 chr14 101533672 101533882 + 8.25 0.000 Intergenic Intergenic 26645 NR_152590 64150 Hs.525597 NR_002770 ENSG00000258498 DIO3OS C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041 DIO3 opposite strand upstream RNA ncRNA chr1-9554 chr1 40825430 40825640 + 8.25 0.000 intron (NM_004700, intron 9 of 13) intron (NM_004700, intron 9 of 13) 36828 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr11-5813 chr11 7117979 7118189 + 8.25 0.000 Intergenic Intergenic 29086 NM_014469 27288 Hs.121605 NM_014469 ENSG00000170748 RBMXL2 HNRNPG-T|HNRNPGT|HNRPGT RBMX like 2 protein-coding chr8-7009 chr8 109314134 109314344 + 8.25 0.000 intron (NM_032869, intron 2 of 9) intron (NM_032869, intron 2 of 9) 15694 NM_001128211 84955 Hs.380291 NM_032869 ENSG00000120526 NUDCD1 CML66|OVA66 NudC domain containing 1 protein-coding chr7-7916 chr7 7505246 7505456 + 8.25 0.000 intron (NM_001037763, intron 11 of 34) intron (NM_001037763, intron 11 of 34) 30522 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding chr1-15700 chr1 169055143 169055353 + 8.25 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 31757 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr13-1935 chr13 86595700 86595910 + 8.25 0.000 Intergenic L1PREC2|LINE|L1 -316115 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr13-2761 chr13 98757439 98757649 + 8.25 0.000 Intergenic Intergenic -4872 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr1-16608 chr1 238330066 238330276 + 8.25 0.000 Intergenic Intergenic 155846 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr8-4310 chr8 98256280 98256490 + 8.25 0.000 intron (NR_135747, intron 1 of 11) L1MB4|LINE|L1 37850 NM_024759 79815 Hs.309489 NM_024759 ENSG00000104361 NIPAL2 NPAL2 NIPA like domain containing 2 protein-coding chr5-8490 chr5 133247292 133247502 + 8.25 0.000 intron (NM_015082, intron 7 of 15) intron (NM_015082, intron 7 of 15) 180309 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr14-3997 chr14 36346141 36346351 + 8.25 0.000 Intergenic Intergenic -25570 NM_001144891 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr7-2376 chr7 30564344 30564554 + 8.25 0.000 intron (NR_038889, intron 3 of 6) intron (NR_038889, intron 3 of 6) 13330 NR_038889 401320 Hs.561708 NR_038889 GARS-DT - GARS divergent transcript ncRNA chr11-6954 chr11 113289569 113289779 + 8.25 0.000 Intergenic Intergenic -15773 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr7-9279 chr7 125077042 125077252 + 8.25 0.000 intron (NR_125718, intron 4 of 10) L2a|LINE|L2 -107422 NR_110188 101928283 Hs.566650 NR_110188 ENSG00000224897 LOC101928283 - uncharacterized LOC101928283 ncRNA chr4-3400 chr4 43341957 43342167 + 8.25 0.000 Intergenic LTR54|LTR|ERV1 150481 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr4-6672 chr4 2598700 2598910 + 8.25 0.000 intron (NM_001366316, intron 2 of 20) intron (NM_001366316, intron 2 of 20) -26627 NM_001256668 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr11-5549 chr11 96501344 96501554 + 8.25 0.000 intron (NR_047481, intron 1 of 4) LTR46-int|LTR|ERV1 5428 NR_047481 100874053 Hs.742044 NR_047481 JRKL-AS1 - JRKL antisense RNA 1 ncRNA chr1-11452 chr1 82162555 82162765 + 8.25 0.000 Intergenic Intergenic 360207 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr11-6869 chr11 101665805 101666015 + 8.25 0.000 Intergenic L1MA2|LINE|L1 -81903 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr8-7219 chr8 126720205 126720415 + 8.25 0.000 Intergenic MIRb|SINE|MIR -161832 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr7-6084 chr7 116610288 116610498 + 8.25 0.000 intron (NR_120506, intron 1 of 4) intron (NR_120506, intron 1 of 4) 4427 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr17-3776 chr17 35175702 35175912 + 8.25 0.000 intron (NM_001033576, intron 14 of 19) intron (NM_001033576, intron 14 of 19) 18586 NM_152462 146861 Hs.514814 NM_152462 ENSG00000164729 SLC35G3 AMAC1|TMEM21A solute carrier family 35 member G3 protein-coding chr4-7057 chr4 29714348 29714558 + 8.25 0.000 Intergenic AluY|SINE|Alu 500161 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr11-5897 chr11 12719225 12719435 + 8.25 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 44909 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr18-1169 chr18 14899493 14899703 + 8.25 0.000 Intergenic Charlie21a|DNA|hAT-Charlie -46669 NR_104164 400644 Hs.514732 NR_104164 ENSG00000266554 LINC01443 - long intergenic non-protein coding RNA 1443 ncRNA chr14-3473 chr14 101609821 101610031 + 8.25 0.000 Intergenic L1MA8|LINE|L1 48575 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr2-8855 chr2 174384894 174385104 + 8.25 0.000 intron (NM_004882, intron 2 of 9) AluJo|SINE|Alu 10713 NM_004882 9541 Hs.632531 NM_004882 ENSG00000138433 CIR1 CIR corepressor interacting with RBPJ, 1 protein-coding chr7-3588 chr7 25028627 25028837 + 8.25 0.000 Intergenic Intergenic -48554 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr1-15347 chr1 145905387 145905597 + 8.25 0.000 intron (NM_001303041, intron 1 of 25) AluY|SINE|Alu 4558 NM_001303040 8515 Hs.158237 NM_003637 ENSG00000143127 ITGA10 PRO827 integrin subunit alpha 10 protein-coding chr8-3738 chr8 22251399 22251609 + 8.25 0.000 3' UTR (NM_001722, exon 9 of 9) 3' UTR (NM_001722, exon 9 of 9) 6371 NM_001722 661 Hs.148342 NM_001722 ENSG00000168495 POLR3D BN51T|RPC4|RPC53|TSBN51 RNA polymerase III subunit D protein-coding chr17-5204 chr17 15220677 15220887 + 8.25 0.000 Intergenic L1MEg|LINE|L1 30914 NR_039884 100616125 NR_039884 ENSG00000265110 MIR4731 - microRNA 4731 ncRNA chr11-5870 chr11 10571080 10571290 + 8.25 0.000 intron (NR_034094, intron 1 of 2) MLT1E2-int|LTR|ERVL-MaLR -2520 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr2-11629 chr2 4572199 4572409 + 8.25 0.000 Intergenic L1MD3|LINE|L1 83918 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr3-8395 chr3 99808131 99808341 + 8.25 0.000 Intergenic Intergenic -9626 NM_032359 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr5-4058 chr5 52711299 52711509 + 8.25 0.000 Intergenic L3|LINE|CR1 -76512 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr19-3614 chr19 55357047 55357257 + 8.25 0.000 intron (NM_001145402, intron 9 of 10) L1MB5|LINE|L1 -2433 NM_144613 125965 Hs.550544 NM_144613 ENSG00000160471 COX6B2 COXVIB2|CT59 cytochrome c oxidase subunit 6B2 protein-coding chr1-4818 chr1 22296971 22297181 + 8.25 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 30837 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr2-6050 chr2 126635378 126635588 + 8.25 0.000 Intergenic Intergenic -20452 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr3-7098 chr3 181358143 181358353 + 8.25 0.000 intron (NR_075091, intron 3 of 7) intron (NR_075091, intron 3 of 7) 84238 NR_125407 102724604 Hs.570524 NR_125407 ENSG00000241231 LOC102724604 - uncharacterized LOC102724604 ncRNA chr3-2289 chr3 101686344 101686554 + 8.25 0.000 intron (NM_000986, intron 2 of 5) intron (NM_000986, intron 2 of 5) 269 NM_000986 6152 Hs.477028 NM_000986 ENSG00000114391 RPL24 HEL-S-310|L24 ribosomal protein L24 protein-coding chr10-5105 chr10 48454589 48454799 + 8.25 0.000 intron (NR_144642, intron 6 of 9) intron (NR_144642, intron 6 of 9) 38956 NM_001256026 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr11-9205 chr11 37641320 37641530 + 8.25 0.000 Intergenic AluJb|SINE|Alu -297176 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr17-3727 chr17 21191559 21191769 + 8.25 0.000 3' UTR (NM_001330159, exon 7 of 7) 3' UTR (NM_001330159, exon 7 of 7) 22931 NR_024547 8834 Hs.592945 NM_003876 ENSG00000178307 TMEM11 C17orf35|PM1|PMI transmembrane protein 11 protein-coding chr12-7902 chr12 107678609 107678819 + 8.25 0.000 Intergenic Intergenic -7018 NM_001317963 11137 Hs.506652 NM_007062 ENSG00000136045 PWP1 IEF-SSP-9502 PWP1 homolog, endonuclein protein-coding chr9-5711 chr9 124709022 124709232 + 8.25 0.000 intron (NM_033334, intron 2 of 9) intron (NM_033334, intron 2 of 9) 15417 NR_029782 406956 NR_029782 ENSG00000207737 MIR181B2 MIRN181B2|mir-181b-2 microRNA 181b-2 ncRNA chr9-4993 chr9 21582830 21583040 + 8.25 0.000 Intergenic Intergenic -23137 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr1-1742 chr1 153946038 153946248 + 8.25 0.000 promoter-TSS (NM_001367466) promoter-TSS (NM_001367466) 575 NM_014856 9909 Hs.744878 NM_014856 ENSG00000198837 DENND4B KIAA0476 DENN domain containing 4B protein-coding chr19-5851 chr19 43354268 43354478 + 8.25 0.000 exon (NM_020406, exon 3 of 9) exon (NM_020406, exon 3 of 9) 687 NM_020406 57126 Hs.232165 NM_020406 ENSG00000204936 CD177 HNA-2a|HNA2A|NB1|NB1 GP|PRV-1|PRV1 CD177 molecule protein-coding chr10-8247 chr10 74503234 74503444 + 8.25 0.000 intron (NM_001369124, intron 6 of 9) L2|LINE|L2 25985 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr11-4001 chr11 4832363 4832573 + 8.25 0.000 Intergenic Intergenic 11147 NM_001004753 119694 Hs.553562 NM_001004753 ENSG00000176925 OR51F2 OR11-23 olfactory receptor family 51 subfamily F member 2 protein-coding chrX-4715 chrX 88166649 88166859 + 8.25 0.000 Intergenic L1P4e|LINE|L1 -580471 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr11-8330 chr11 76707292 76707502 + 8.25 0.000 intron (NR_024042, intron 11 of 20) intron (NR_024042, intron 11 of 20) 14392 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr10-7935 chr10 52605017 52605227 + 8.25 0.000 intron (NR_155748, intron 1 of 2) L1PA5|LINE|L1 -134589 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LNCAROD A-ROD|LINC01468|lnc-MBL2-4 lncRNA activating regulator of DKK1 ncRNA chr18-1694 chr18 220089 220299 + 8.25 0.000 intron (NM_005131, intron 17 of 20) L1ME3Cz|LINE|L1 47853 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr10-5467 chr10 79289718 79289928 + 8.25 0.000 exon (NM_020338, exon 9 of 25) exon (NM_020338, exon 9 of 25) -57646 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr4-8543 chr4 164937717 164937927 + 8.25 0.000 Intergenic Intergenic -19126 NR_160935 152756 Hs.178648 NM_153027 ENSG00000250486 FAM218A C4orf39 family with sequence similarity 218 member A ncRNA chr2-6978 chr2 131520801 131521011 + 8.25 0.000 non-coding (NR_026922, exon 18 of 18) non-coding (NR_026922, exon 18 of 18) -6769 NM_001258305 90557 Hs.351461 NM_138770 ENSG00000163040 CCDC74A - coiled-coil domain containing 74A protein-coding chr11-5067 chr11 111350684 111350894 + 8.25 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger 3032 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chr5-3920 chr5 172381214 172381424 + 8.25 0.000 intron (NM_001017995, intron 5 of 12) intron (NM_001017995, intron 5 of 12) 73204 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr7-2830 chr7 100658415 100658625 + 8.25 0.000 intron (NR_133946, intron 1 of 2) AluSz|SINE|Alu 1959 NR_133946 105375429 Hs.489345 NR_133946 LOC105375429 - uncharacterized LOC105375429 ncRNA chr9-7456 chr9 27041904 27042114 + 8.25 0.000 intron (NM_025103, intron 13 of 19) intron (NM_025103, intron 13 of 19) -36337 NM_022901 64922 Hs.128071 NM_022901 ENSG00000184434 LRRC19 - leucine rich repeat containing 19 protein-coding chr2-6647 chr2 4447823 4448033 + 8.25 0.000 Intergenic MER49|LTR|ERV1 208294 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr12-6928 chr12 25418403 25418613 + 8.25 0.000 Intergenic L1ME1|LINE|L1 134775 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr7-5155 chr7 6211105 6211315 + 8.25 0.000 intron (NM_001367581, intron 1 of 13) L2a|LINE|L2 -39073 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr2-7527 chr2 21333148 21333358 + 8.25 0.000 Intergenic Intergenic 209267 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr2-10346 chr2 161623532 161623742 + 8.25 0.000 promoter-TSS (NM_001354441) promoter-TSS (NM_001354441) -698 NM_001178016 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr18-2878 chr18 9831013 9831223 + 8.25 0.000 intron (NM_006868, intron 5 of 6) intron (NM_006868, intron 5 of 6) -54855 NM_032243 84203 Hs.98712 NM_032243 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 protein-coding chr5-7648 chr5 52571137 52571347 + 8.25 0.000 Intergenic Intergenic -216674 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr2-12593 chr2 70817008 70817218 + 8.25 0.000 intron (NM_001321308, intron 3 of 6) intron (NM_001321308, intron 3 of 6) 3486 NM_173535 165530 Hs.681239 NM_173535 ENSG00000152672 CLEC4F CLECSF13|KCLR C-type lectin domain family 4 member F protein-coding chr19-6845 chr19 42593171 42593381 + 8.25 0.000 intron (NM_001816, intron 2 of 5) intron (NM_001816, intron 2 of 5) 1648 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr7-4956 chr7 141973168 141973378 + 8.25 0.000 exon (NM_176817, exon 1 of 1) exon (NM_176817, exon 1 of 1) 500 NM_176817 5726 Hs.647085 NM_176817 ENSG00000257138 TAS2R38 PTC|T2R38|T2R61|THIOT taste 2 receptor member 38 protein-coding chr14-1139 chr14 19174604 19174814 + 8.25 0.000 Intergenic Intergenic 48179 NR_160525 114004396 Hs.650463 NR_160525 LNCRNA-ATB - long noncoding RNA activated by TGF-beta ncRNA chrX-2032 chrX 16754149 16754359 + 8.25 0.000 intron (NR_033181, intron 5 of 8) intron (NR_033181, intron 5 of 8) -32178 NM_001168683 55787 Hs.555961 NM_018360 ENSG00000086712 TXLNG CXorf15|ELRG|FIAT|LSR5|TXLNGX taxilin gamma protein-coding chr3-7503 chr3 162104855 162105065 + 8.25 0.000 Intergenic MER34C2|LTR|ERV1 608152 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr11-3985 chr11 2367334 2367544 + 8.25 0.000 intron (NR_108080, intron 1 of 2) intron (NR_108080, intron 1 of 2) -8738 NM_001297649 975 Hs.54457 NM_004356 ENSG00000110651 CD81 CVID6|S5.7|TAPA1|TSPAN28 CD81 molecule protein-coding chr15-4347 chr15 40660637 40660847 + 8.25 0.000 intron (NM_144508, intron 25 of 25) AluSz|SINE|Alu 34363 NR_040058 100505648 Hs.586876 NR_040058 ENSG00000245849 RAD51-AS1 TODRA RAD51 antisense RNA 1 ncRNA chr10-7367 chr10 2004350 2004560 + 8.25 0.000 Intergenic LTR16|LTR|ERVL 9893 NR_040253 282980 Hs.576810 NR_040253 ENSG00000234962 LINC00700 - long intergenic non-protein coding RNA 700 ncRNA chr12-5086 chr12 94059494 94059704 + 8.25 0.000 Intergenic Intergenic -88978 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr12-4920 chr12 68102298 68102508 + 8.25 0.000 Intergenic L2a|LINE|L2 57337 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr5-4707 chr5 40874149 40874359 + 8.25 0.000 Intergenic L2|LINE|L2 32887 NM_032587 84674 Hs.200242 NM_032587 ENSG00000132357 CARD6 CINCIN1 caspase recruitment domain family member 6 protein-coding chr3-9096 chr3 28137625 28137835 + 8.25 0.000 Intergenic L2b|LINE|L2 -103889 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr12-7889 chr12 106666913 106667123 + 8.25 0.000 intron (NM_001206691, intron 4 of 17) L1MC1|LINE|L1 17682 NR_038912 100505978 Hs.662583 NR_038912 ENSG00000257711 LOC100505978 - uncharacterized LOC100505978 ncRNA chr1-13826 chr1 19529615 19529825 + 8.25 0.000 Intergenic Intergenic -44181 NM_001206540 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr1-14060 chr1 28686756 28686966 + 8.25 0.000 intron (NM_001319674, intron 2 of 9) L2c|LINE|L2 18077 NM_024482 10691 Hs.632373 NM_006582 ENSG00000162419 GMEB1 P96PIF|PIF96 glucocorticoid modulatory element binding protein 1 protein-coding chrX-2392 chrX 71866458 71866668 + 8.25 0.000 Intergenic Intergenic -44525 NM_001013627 340527 Hs.397836 NM_001013627 ENSG00000204131 NHSL2 - NHS like 2 protein-coding chr2-8665 chr2 149136213 149136423 + 8.25 0.000 intron (NM_001317004, intron 3 of 6) intron (NM_001317004, intron 3 of 6) 18144 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr2-12743 chr2 84580942 84581152 + 8.25 0.000 intron (NM_001370, intron 14 of 76) MLT1O|LTR|ERVL-MaLR 64592 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chrX-1774 chrX 69443502 69443712 + 8.25 0.000 Intergenic L1PA14|LINE|L1 -61628 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr5-4814 chr5 59188045 59188255 + 8.25 0.000 intron (NM_006203, intron 3 of 14) intron (NM_006203, intron 3 of 14) 87965 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr8-4900 chr8 81683695 81683905 + 8.25 0.000 intron (NM_005536, intron 1 of 8) intron (NM_005536, intron 1 of 8) 2525 NM_005536 3612 Hs.656694 NM_005536 ENSG00000133731 IMPA1 IMP|IMPA|MRT59 inositol monophosphatase 1 protein-coding chr1-10232 chr1 115781453 115781663 + 8.25 0.000 Intergenic Charlie21a|DNA|hAT-Charlie -12753 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr7-8555 chr7 57146950 57147160 + 8.25 0.000 Intergenic Intergenic -7191 NM_033273 90827 Hs.616660 NM_033273 ENSG00000185177 ZNF479 HKr19|KR19 zinc finger protein 479 protein-coding chr22-2540 chr22 25822599 25822809 + 8.25 0.000 intron (NM_001318245, intron 12 of 43) LTR2C|LTR|ERV1 80516 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr2-6319 chr2 70124729 70124939 + 8.25 0.000 intron (NR_024444, intron 1 of 1) AluYc|SINE|Alu 482 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr6-3860 chr6 43783982 43784192 + 8.25 0.000 intron (NM_001033756, intron 6 of 6) intron (NM_001033756, intron 6 of 6) 12119 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr17-7753 chr17 34620164 34620374 + 8.25 0.000 intron (NM_001304438, intron 1 of 8) intron (NM_001304438, intron 1 of 8) 39520 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chrX-3999 chrX 15826205 15826415 + 8.25 0.000 3' UTR (NM_001272071, exon 6 of 6) 3' UTR (NM_001272071, exon 6 of 6) 28503 NM_001368994 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr12-8339 chr12 131238325 131238535 + 8.25 0.000 Intergenic MIR|SINE|MIR 59542 NR_135045 107161159 Hs.730119 NR_135045 ENSG00000248703 LINC02415 - long intergenic non-protein coding RNA 2415 ncRNA chr22-2526 chr22 24789702 24789912 + 8.25 0.000 Intergenic MER77|LTR|ERVL -15087 NR_045649 440822 Hs.448343 NM_001008496 ENSG00000184571 PIWIL3 HIWI3 piwi like RNA-mediated gene silencing 3 protein-coding chr12-6665 chr12 2710866 2711076 + 8.25 0.000 Intergenic Intergenic -19814 NR_045725 100652846 Hs.683896 NR_045725 ENSG00000246627 CACNA1C-AS1 - CACNA1C antisense RNA 1 ncRNA chr6-4058 chr6 136423232 136423442 + 8.25 0.000 intron (NM_001198617, intron 1 of 15) MIRb|SINE|MIR 43538 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr1-15599 chr1 160816471 160816681 + 8.25 0.000 intron (NM_001261457, intron 4 of 8) intron (NM_001261457, intron 4 of 8) 20402 NM_001261456 4063 Hs.403857 NM_002348 ENSG00000122224 LY9 CD229|SLAMF3|hly9|mLY9 lymphocyte antigen 9 protein-coding chr1-12022 chr1 103085218 103085428 + 8.25 0.000 intron (NM_001854, intron 1 of 66) MER6|DNA|TcMar-Tigger 23173 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chrX-5154 chrX 131346812 131347022 + 8.25 0.000 Intergenic Intergenic -57488 NM_001170961 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr1-5240 chr1 201557198 201557408 + 8.25 0.000 Intergenic Intergenic 37399 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr19-4224 chr19 48140698 48140908 + 8.25 0.000 intron (NR_135500, intron 11 of 27) LTR8|LTR|ERV1 29541 NR_135499 3978 Hs.1770 NM_000234 ENSG00000105486 LIG1 - DNA ligase 1 protein-coding chr19-6413 chr19 14486249 14486459 + 8.25 0.000 intron (NM_202470, intron 1 of 6) MLT1I|LTR|ERVL-MaLR 9773 NM_005716 10755 Hs.655012 NM_005716 ENSG00000123159 GIPC1 C19orf3|GIPC|GLUT1CBP|Hs.6454|IIP-1|NIP|RGS19IP1|SEMCAP|SYNECTIIN|SYNECTIN|TIP-2 GIPC PDZ domain containing family member 1 protein-coding chr2-9856 chr2 180426939 180427149 + 8.25 0.000 Intergenic L1MA3|LINE|L1 -265060 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA KI270744.1-4 KI270744.1 69038 69248 + 8.25 0.000 NA NA NA NA chr22-2066 chr22 47195397 47195607 + 8.25 0.000 Intergenic Intergenic -150069 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr22-3156 chr22 27363229 27363439 + 8.25 0.000 Intergenic L1MC1|LINE|L1 52683 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr11-4087 chr11 30904599 30904809 + 8.25 0.000 intron (NM_001367979, intron 31 of 38) intron (NM_001367979, intron 31 of 38) 87982 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr12-4839 chr12 57572310 57572520 + 8.25 0.000 intron (NM_004984, intron 14 of 28) intron (NM_004984, intron 14 of 28) -18777 NM_001146260 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr12-4816 chr12 56397575 56397785 + 8.25 0.000 Intergenic MER52C|LTR|ERV1 -34823 NM_001638 319 Hs.534302 NM_001638 ENSG00000175336 APOF Apo-F|LTIP apolipoprotein F protein-coding chr4-3501 chr4 143087556 143087766 + 8.25 0.000 Intergenic L2a|LINE|L2 97200 NR_136203 105377623 NR_136203 ENSG00000250326 LOC105377623 - uncharacterized LOC105377623 ncRNA chr8-5046 chr8 24511592 24511802 + 8.25 0.000 non-coding (NR_125809, exon 3 of 5) non-coding (NR_125809, exon 3 of 5) 3171 NR_125809 101929315 Hs.125562 NR_125809 ENSG00000253643 LOC101929315 - uncharacterized LOC101929315 ncRNA chr7-9063 chr7 104054551 104054761 + 8.25 0.000 Intergenic AluJr4|SINE|Alu -64998 NM_005045 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr1-9472 chr1 36217581 36217791 + 8.25 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -6757 NM_001321473 9967 Hs.744057 NM_005119 ENSG00000054118 THRAP3 BCLAF2|TRAP150 thyroid hormone receptor associated protein 3 protein-coding chr3-3373 chr3 46863476 46863686 + 8.25 0.000 promoter-TSS (NM_000258) promoter-TSS (NM_000258) -98 NM_000258 4634 Hs.517939 NM_000258 ENSG00000160808 MYL3 CMH8|MLC-lV/sb|MLC1SB|MLC1V|VLC1|VLCl myosin light chain 3 protein-coding chr17-3888 chr17 50133910 50134120 + 8.25 0.000 3' UTR (NM_032595, exon 10 of 10) 3' UTR (NM_032595, exon 10 of 10) -3855 NM_001257359 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr1-9656 chr1 47897746 47897956 + 8.25 0.000 intron (NM_001194986, intron 2 of 6) MIRc|SINE|MIR 99534 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr13-2807 chr13 102277435 102277645 + 8.25 0.000 intron (NM_001321940, intron 1 of 5) intron (NM_001321940, intron 1 of 5) 33146 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr2-10149 chr2 76445177 76445387 + 8.25 0.000 Intergenic 7SK|RNA|RNA -540683 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr15-2056 chr15 58288765 58288975 + 8.25 0.000 Intergenic Intergenic -143121 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr12-3470 chr12 120669592 120669802 + 8.25 0.000 Intergenic AluSx|SINE|Alu -17452 NM_001303628 9761 Hs.744910 NM_014730 ENSG00000110917 MLEC KIAA0152 malectin protein-coding chr13-3660 chr13 32878289 32878499 + 8.25 0.000 intron (NR_047020, intron 3 of 4) ERVL-int|LTR|ERVL 33258 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr19-4270 chr19 345921 346131 + 8.25 0.000 Intergenic Intergenic -1185 NM_017550 54531 Hs.101891 NM_017550 ENSG00000105556 MIER2 KIAA1193|Mi-er2 MIER family member 2 protein-coding chr12-7763 chr12 95315868 95316078 + 8.25 0.000 Intergenic Intergenic 6050 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr2-8567 chr2 135969834 135970044 + 8.25 0.000 intron (NM_001293312, intron 2 of 14) Tigger17a|DNA|TcMar-Tigger -15237 NR_110199 101928243 Hs.602178 NR_110199 ENSG00000231890 DARS-AS1 - DARS antisense RNA 1 ncRNA chr14-2169 chr14 92456668 92456878 + 8.25 0.000 intron (NM_153647, intron 13 of 17) intron (NM_153647, intron 13 of 17) -57008 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr1-3883 chr1 53401043 53401253 + 8.25 0.000 Intergenic Intergenic 38872 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr8-6251 chr8 40816428 40816638 + 8.25 0.000 intron (NM_024645, intron 2 of 6) MLT1J1-int|LTR|ERVL-MaLR 81293 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr11-10477 chr11 117979851 117980061 + 8.25 0.000 Intergenic Intergenic -6435 NM_001558 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding chr2-10504 chr2 227094267 227094477 + 8.25 0.000 intron (NM_000092, intron 19 of 47) intron (NM_000092, intron 19 of 47) 70187 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chrX-5317 chrX 144755685 144755895 + 8.25 0.000 Intergenic AluY|SINE|Alu -491713 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr1-12660 chr1 44486727 44486937 + 8.25 0.000 intron (NM_001319957, intron 1 of 13) MIR|SINE|MIR -58661 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr1-11862 chr1 37813316 37813526 + 8.25 0.000 3' UTR (NM_005955, exon 11 of 11) 3' UTR (NM_005955, exon 11 of 11) -5213 NM_024640 79693 Hs.301564 NM_024640 ENSG00000196449 YRDC DRIP3|IRIP|SUA5 yrdC N6-threonylcarbamoyltransferase domain containing protein-coding chr4-7397 chr4 62957067 62957277 + 8.25 0.000 Intergenic L1PA10|LINE|L1 -795407 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr18-1796 chr18 12213503 12213713 + 8.25 0.000 intron (NR_049896, intron 3 of 4) intron (NR_049896, intron 3 of 4) 12829 NR_049896 497259 Hs.451609 NR_049896 C18orf61 - uncharacterized LOC497259 ncRNA chr17-1534 chr17 79777968 79778178 + 8.25 0.000 promoter-TSS (NM_005189) promoter-TSS (NM_005189) -75 NM_005189 84733 Hs.368410 NM_005189 ENSG00000173894 CBX2 CDCA6|M33|SRXY5 chromobox 2 protein-coding chr10-7927 chr10 51397781 51397991 + 8.25 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 98313 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr16-3286 chr16 88842633 88842843 + 8.25 0.000 exon (NM_000512, exon 2 of 14) exon (NM_000512, exon 2 of 14) -13482 NR_134671 51693 Hs.461722 NM_016209 ENSG00000167515 TRAPPC2L HSPC176|PERRB trafficking protein particle complex 2 like protein-coding chr6-8078 chr6 124695417 124695627 + 8.25 0.000 intron (NM_001040214, intron 4 of 6) intron (NM_001040214, intron 4 of 6) -267023 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr11-8118 chr11 45388743 45388953 + 8.25 0.000 TTS (NR_122071) TTS (NR_122071) 17451 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr14-3030 chr14 56550055 56550265 + 8.25 0.000 non-coding (NR_135241, exon 2 of 2) non-coding (NR_135241, exon 2 of 2) -29638 NM_017799 54916 Hs.497253 NM_017799 ENSG00000070269 TMEM260 C14orf101|SHDRA transmembrane protein 260 protein-coding chr6-3226 chr6 142232614 142232824 + 8.25 0.000 Intergenic L1P2|LINE|L1 -69200 NM_001032394 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr4-4970 chr4 131267645 131267855 + 8.25 0.000 Intergenic Intergenic -497088 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr9-4263 chr9 96777298 96777508 + 8.25 0.000 intron (NM_001314060, intron 1 of 4) MIRb|SINE|MIR 684 NM_001314059 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding chr3-5282 chr3 122307336 122307546 + 8.25 0.000 Intergenic Intergenic -17807 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr11-7177 chr11 129894811 129895021 + 8.25 0.000 intron (NM_001143835, intron 1 of 26) intron (NM_001143835, intron 1 of 26) 662 NM_001143835 4798 Hs.530539 NM_006165 ENSG00000170322 NFRKB INO80G nuclear factor related to kappaB binding protein protein-coding chr17-5859 chr17 67812039 67812249 + 8.25 0.000 Intergenic MIRb|SINE|MIR -13359 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr12-6920 chr12 24617701 24617911 + 8.25 0.000 Intergenic Intergenic -33638 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr7-5086 chr7 2492823 2493033 + 8.25 0.000 Intergenic Intergenic -16545 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr2-7814 chr2 45839735 45839945 + 8.25 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 188165 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr19-3574 chr19 47453403 47453613 + 8.25 0.000 intron (NM_015063, intron 3 of 9) intron (NM_015063, intron 3 of 9) 18385 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr9-7067 chr9 125831411 125831621 + 8.25 0.000 intron (NR_024122, intron 2 of 7) L1MC5a|LINE|L1 83333 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr1-4859 chr1 29652030 29652240 + 8.25 0.000 Intergenic Intergenic -302021 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr1-8862 chr1 3738131 3738341 + 8.25 0.000 non-coding (NR_033710, exon 6 of 6) non-coding (NR_033710, exon 6 of 6) 8535 NR_033712 57212 Hs.49658 NM_207306 ENSG00000227372 TP73-AS1 KIAA0495|PDAM TP73 antisense RNA 1 ncRNA chr7-5246 chr7 17741563 17741773 + 8.25 0.000 Intergenic L1P4b|LINE|L1 -182759 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr13-2098 chr13 78983592 78983802 + 8.25 0.000 Intergenic LTR90B|LTR|LTR -143647 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chrX-1494 chrX 153774639 153774849 + 8.25 0.000 exon (NM_005393, exon 23 of 36) exon (NM_005393, exon 23 of 36) -6257 NM_001170761 26576 Hs.104865 NM_014370 ENSG00000184343 SRPK3 MSSK-1|MSSK1|STK23 SRSF protein kinase 3 protein-coding chr2-8651 chr2 147131833 147132043 + 8.25 0.000 Intergenic MamGypLTR3a|LTR|Gypsy 544881 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chrX-2183 chrX 39427965 39428175 + 8.25 0.000 Intergenic Intergenic -36296 NR_110385 101927449 Hs.553988 NR_110385 ENSG00000236747 LINC01282 - long intergenic non-protein coding RNA 1282 ncRNA chr17-4530 chr17 76544296 76544506 + 8.25 0.000 non-coding (NR_033357, exon 5 of 5) non-coding (NR_033357, exon 5 of 5) 4357 NM_001077620 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 photoreceptor disc component protein-coding chr8-3242 chr8 142745607 142745817 + 8.25 0.000 Intergenic MIRb|SINE|MIR -3306 NM_020427 57152 Hs.103505 NM_020427 ENSG00000126233 SLURP1 ANUP|ARS|ArsB|LY6-MT|LY6LS|MDM secreted LY6/PLAUR domain containing 1 protein-coding chr5-7815 chr5 66495761 66495971 + 8.25 0.000 Intergenic Intergenic 15738 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr1-11201 chr1 242971182 242971392 + 8.25 0.000 Intergenic Intergenic 130457 NR_029401 731275 Hs.722350 NR_029401 ENSG00000214837 LINC01347 - long intergenic non-protein coding RNA 1347 ncRNA chr16-3722 chr16 4893747 4893957 + 8.25 0.000 intron (NM_002705, intron 12 of 21) intron (NM_002705, intron 12 of 21) 43296 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr1-4190 chr1 51972311 51972521 + 8.25 0.000 intron (NM_002867, intron 2 of 4) MLT1B|LTR|ERVL-MaLR 18284 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr11-3412 chr11 10505662 10505872 + 8.25 0.000 exon (NM_001172430, exon 15 of 15) exon (NM_001172430, exon 15 of 15) 2559 NR_039705 100616263 NR_039705 ENSG00000283813 MIR4485 mir-4485 microRNA 4485 ncRNA chr5-3225 chr5 91834162 91834372 + 8.25 0.000 Intergenic Intergenic -450950 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr2-7143 chr2 196101847 196102057 + 8.25 0.000 Intergenic Intergenic -33115 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr2-13572 chr2 156033895 156034105 + 8.25 0.000 intron (NR_110250, intron 1 of 3) intron (NR_110250, intron 1 of 3) 220931 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr11-5498 chr11 81166993 81167203 + 8.25 0.000 Intergenic (TACATT)n|Simple_repeat|Simple_repeat -404295 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr2-8849 chr2 173983722 173983932 + 8.25 0.000 Intergenic LTR88c|LTR|Gypsy? -18125 NM_001172712 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr7-5222 chr7 14633871 14634081 + 8.25 0.000 intron (NM_001350722, intron 13 of 25) intron (NM_001350722, intron 13 of 25) 207474 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr20-3410 chr20 41277268 41277478 + 8.25 0.000 intron (NM_015035, intron 1 of 3) intron (NM_015035, intron 1 of 3) 22747 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr19-5082 chr19 53016949 53017159 + 8.25 0.000 TTS (NM_152473) TTS (NM_152473) 2963 NM_152473 147664 Hs.44329 NM_152473 ENSG00000269526 ERVV-1 ENVV1|HERV-V1 endogenous retrovirus group V member 1, envelope protein-coding chr9-3685 chr9 100419394 100419604 + 8.25 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -7714 NM_001198807 91283 Hs.530272 NM_080655 ENSG00000066697 MSANTD3 C9orf30|L8 Myb/SANT DNA binding domain containing 3 protein-coding chr10-5450 chr10 78911373 78911583 + 8.25 0.000 Intergenic L2c|LINE|L2 155970 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr3-7301 chr3 14863954 14864164 + 8.25 0.000 intron (NM_152536, intron 1 of 19) intron (NM_152536, intron 1 of 19) 45097 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr12-4845 chr12 57868066 57868276 + 8.25 0.000 Intergenic LTR40b|LTR|ERVL -21442 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr3-5184 chr3 68743658 68743868 + 8.25 0.000 intron (NM_001005527, intron 4 of 5) MIRc|SINE|MIR 188784 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr7-7026 chr7 131006531 131006741 + 8.25 0.000 intron (NR_109850, intron 3 of 5) intron (NR_109850, intron 3 of 5) 93172 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr13-3967 chr13 62590065 62590275 + 8.25 0.000 Intergenic Intergenic 206522 NR_047029 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr6-3562 chr6 53697549 53697759 + 8.25 0.000 Intergenic Intergenic -31898 NM_001003760 401265 Hs.131064 NM_001003760 ENSG00000124743 KLHL31 BKLHD6|KBTBD1|KLHL|bA345L23.2 kelch like family member 31 protein-coding chr10-2582 chr10 72074261 72074471 + 8.25 0.000 intron (NM_014767, intron 2 of 11) intron (NM_014767, intron 2 of 11) 14185 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr6-5972 chr6 85449646 85449856 + 8.25 0.000 promoter-TSS (NM_002526) promoter-TSS (NM_002526) 167 NM_001204813 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr9-3014 chr9 117723912 117724122 + 8.25 0.000 3' UTR (NM_003266, exon 4 of 4) 3' UTR (NM_003266, exon 4 of 4) 19614 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr3-6550 chr3 120275034 120275244 + 8.25 0.000 Intergenic Intergenic -30844 NM_001168271 165829 Hs.333358 NM_153002 ENSG00000175697 GPR156 GABABL|PGR28 G protein-coupled receptor 156 protein-coding chr9-6371 chr9 21551508 21551718 + 8.25 0.000 intron (NR_152877, intron 1 of 3) intron (NR_152877, intron 1 of 3) 8185 NR_152877 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr17-2661 chr17 28973518 28973728 + 8.25 0.000 intron (NM_001290202, intron 3 of 16) intron (NM_001290202, intron 3 of 16) -22105 NM_001290131 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr3-8187 chr3 40372480 40372690 + 8.25 0.000 Intergenic L1MA6|LINE|L1 -14599 NM_001248 956 Hs.441145 NM_001248 ENSG00000168032 ENTPD3 CD39L3|HB6|NTPDase-3 ectonucleoside triphosphate diphosphohydrolase 3 protein-coding chr11-7214 chr11 134415722 134415932 + 8.25 0.000 Intergenic Intergenic -3585 NM_001367973 27087 Hs.381050 NM_018644 ENSG00000109956 B3GAT1 CD57|GLCATP|GLCUATP|HNK1|LEU7|NK-1|NK1 beta-1,3-glucuronyltransferase 1 protein-coding chr17-8582 chr17 80294740 80294950 + 8.25 0.000 exon (NM_001256071, exon 9 of 68) exon (NM_001256071, exon 9 of 68) 33993 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr6-5991 chr6 96926450 96926660 + 8.25 0.000 intron (NM_001323252, intron 2 of 11) MIRc|SINE|MIR 1827 NM_001323255 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr19-7001 chr19 49271029 49271239 + 8.25 0.000 Intergenic Intergenic 37734 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr2-9347 chr2 226782718 226782928 + 8.25 0.000 intron (NM_005544, intron 1 of 1) AluSz|SINE|Alu 15967 NM_005544 3667 Hs.471508 NM_005544 ENSG00000169047 IRS1 HIRS-1 insulin receptor substrate 1 protein-coding chr3-6248 chr3 68334186 68334396 + 8.25 0.000 intron (NM_001252216, intron 2 of 4) intron (NM_001252216, intron 2 of 4) -166346 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chrX-2288 chrX 51608256 51608466 + 8.25 0.000 Intergenic MIRb|SINE|MIR 10557 NM_001355276 347549 NM_001355276 ENSG00000224109 CENPVL3 CENPVP3 centromere protein V like 3 protein-coding chr1-10252 chr1 118255526 118255736 + 8.25 0.000 Intergenic L2b|LINE|L2 -70403 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr1-8265 chr1 35761716 35761926 + 8.25 0.000 intron (NM_001190481, intron 6 of 23) intron (NM_001190481, intron 6 of 23) 8157 NM_001330490 63967 Hs.175613 NM_022111 ENSG00000092853 CLSPN - claspin protein-coding chr11-7093 chr11 122445147 122445357 + 8.25 0.000 Intergenic L1PB1|LINE|L1 -22381 NR_137179 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr12-6298 chr12 51091175 51091385 + 8.25 0.000 Intergenic AluJo|SINE|Alu -7684 NR_045072 81566 Hs.524425 NM_030809 ENSG00000110925 CSRNP2 C12orf2|C12orf22|FAM130A1|PPP1R72|TAIP-12 cysteine and serine rich nuclear protein 2 protein-coding chr1-10108 chr1 99146176 99146386 + 8.25 0.000 intron (NR_033940, intron 2 of 2) MER52C|LTR|ERV1 -118011 NM_014839 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chr6-8455 chr6 154126316 154126526 + 8.25 0.000 non-coding (NR_104348, exon 5 of 5) non-coding (NR_104348, exon 5 of 5) 36659 NM_001285528 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr16-5703 chr16 80105090 80105300 + 8.25 0.000 Intergenic Intergenic 309946 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr10-8687 chr10 101323835 101324045 + 8.25 0.000 Intergenic L2b|LINE|L2 -30093 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr3-6628 chr3 127226176 127226386 + 8.25 0.000 Intergenic HAL1|LINE|L1 33150 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr7-6627 chr7 112553583 112553793 + 8.25 0.000 Intergenic L2c|LINE|L2 -64377 NR_110160 100996249 Hs.561749 NR_110159 LOC100996249 - uncharacterized LOC100996249 ncRNA chr19-4129 chr19 18718010 18718220 + 8.25 0.000 intron (NM_015321, intron 1 of 13) L1MB5|LINE|L1 34435 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr10-8987 chr10 120372297 120372507 + 8.25 0.000 Intergenic Intergenic -17179 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr14-5070 chr14 84111421 84111631 + 8.25 0.000 Intergenic Intergenic -1160406 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr11-5747 chr11 2682923 2683133 + 8.25 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 16970 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr1-9372 chr1 30123732 30123942 + 8.25 0.000 Intergenic Intergenic -86225 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr15-2772 chr15 33180481 33180691 + 8.25 0.000 intron (NM_001277313, intron 2 of 20) MER81|DNA|hAT-Blackjack 14128 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr11-10013 chr11 80257901 80258111 + 8.25 0.000 Intergenic LTR12C|LTR|ERV1 504797 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr10-3945 chr10 101116928 101117138 + 8.25 0.000 intron (NR_130724, intron 2 of 2) AluJb|SINE|Alu 14113 NR_130723 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr20-3299 chr20 10890894 10891104 + 8.25 0.000 intron (NR_109866, intron 5 of 6) AluSx|SINE|Alu 18273 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA chr10-3344 chr10 13503674 13503884 + 8.25 0.000 promoter-TSS (NM_152751) promoter-TSS (NM_152751) -803 NM_001100912 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr17-3177 chr17 78422080 78422290 + 8.25 0.000 intron (NR_110602, intron 8 of 8) intron (NR_110602, intron 8 of 8) 43536 NR_110601 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr19-3524 chr19 42154913 42155123 + 8.25 0.000 Intergenic Intergenic -21505 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr10-2286 chr10 15012898 15013108 + 8.25 0.000 Intergenic SATR2|Satellite|Satellite 22422 NR_144469 105376432 Hs.723069 NR_144469 DCLRE1CP1 - DNA cross-link repair 1C pseudogene 1 pseudo chr12-3964 chr12 11799003 11799213 + 8.25 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 149254 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr5-3922 chr5 172592851 172593061 + 8.25 0.000 Intergenic L2c|LINE|L2 -33942 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr17-7468 chr17 15033120 15033330 + 8.25 0.000 intron (NR_135638, intron 1 of 1) intron (NR_135638, intron 1 of 1) 2250 NR_033371 94150 Hs.147654 NR_033371 ENSG00000259944 CDRT7 LINC00025|NCRNA00025 CMT1A duplicated region transcript 7 ncRNA chr4-6160 chr4 38344278 38344488 + 8.25 0.000 Intergenic Intergenic -22531 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr2-13806 chr2 174797937 174798147 + 8.25 0.000 Intergenic Intergenic -33570 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr5-5318 chr5 127419697 127419907 + 8.25 0.000 intron (NM_001308121, intron 11 of 13) intron (NM_001308121, intron 11 of 13) -97838 NM_001286808 133619 Hs.483259 NM_130809 ENSG00000164244 PRRC1 - proline rich coiled-coil 1 protein-coding chr11-7422 chr11 108370553 108370763 + 8.25 0.000 intron (NR_147053, intron 10 of 12) L1M5|LINE|L1 96871 NM_001351110 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr6-3200 chr6 131844343 131844553 + 8.25 0.000 intron (NM_006208, intron 1 of 24) Tigger6a|DNA|TcMar-Tigger 36428 NM_006208 5167 Hs.527295 NM_006208 ENSG00000197594 ENPP1 ARHR2|COLED|M6S1|NPP1|NPPS|PC-1|PCA1|PDNP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding chr6-4234 chr6 5968752 5968962 + 8.25 0.000 Intergenic Intergenic 35187 NM_001278711 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding chr10-6438 chr10 24129406 24129616 + 8.25 0.000 intron (NM_001098500, intron 2 of 18) intron (NM_001098500, intron 2 of 18) -79280 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr1-16602 chr1 237640765 237640975 + 8.25 0.000 intron (NM_001035, intron 46 of 104) intron (NM_001035, intron 46 of 104) 169751 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr12-5265 chr12 109727721 109727931 + 8.25 0.000 intron (NM_032829, intron 1 of 2) intron (NM_032829, intron 1 of 2) 14001 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr13-4307 chr13 99905141 99905351 + 8.25 0.000 intron (NR_104592, intron 8 of 9) intron (NR_104592, intron 8 of 9) 51919 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr2-10239 chr2 112680807 112681017 + 8.25 0.000 Intergenic Intergenic 34973 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding chr2-6238 chr2 33437295 33437505 + 8.25 0.000 intron (NM_170672, intron 1 of 18) intron (NM_170672, intron 1 of 18) 1052 NM_001349975 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding chr2-7147 chr2 196529110 196529320 + 8.25 0.000 intron (NM_001348768, intron 1 of 28) intron (NM_001348768, intron 1 of 28) 63768 NM_020760 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr13-4463 chr13 113021870 113022080 + 8.25 0.000 intron (NM_001320815, intron 2 of 30) intron (NM_001320815, intron 2 of 30) 20261 NM_001320817 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr12-3332 chr12 89030009 89030219 + 8.25 0.000 Intergenic Intergenic -10422 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr15-4243 chr15 33304224 33304434 + 8.25 0.000 intron (NR_120327, intron 2 of 2) intron (NR_120327, intron 2 of 2) 5916 NR_120326 101928134 Hs.133851 NR_120326 ENSG00000259446 LOC101928134 - uncharacterized LOC101928134 ncRNA chr1-14066 chr1 29083786 29083996 + 8.25 0.000 intron (NM_001166007, intron 13 of 17) intron (NM_001166007, intron 13 of 17) 38610 NM_001171868 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chrX-3045 chrX 100926355 100926565 + 8.25 0.000 intron (NM_212559, intron 1 of 2) L1MA9|LINE|L1 2457 NM_212559 402415 Hs.364911 NM_212559 ENSG00000182489 XKRX XKR2|XPLAC|XRG2 XK related X-linked protein-coding chr2-14462 chr2 223859140 223859350 + 8.25 0.000 Intergenic AluJb|SINE|Alu -21663 NR_110906 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chrX-635 chrX 130111073 130111283 + 8.25 0.000 promoter-TSS (NM_001421) promoter-TSS (NM_001421) -287 NM_001127197 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr12-3258 chr12 64941697 64941907 + 8.25 0.000 intron (NR_146276, intron 3 of 3) MLT1D|LTR|ERVL-MaLR 50489 NR_146276 109729131 Hs.577553 NR_146276 ENSG00000248995 LINC02231 - long intergenic non-protein coding RNA 2231 ncRNA chr20-2045 chr20 4721855 4722065 + 8.25 0.000 promoter-TSS (NM_012409) promoter-TSS (NM_012409) 51 NM_012409 23627 Hs.406696 NM_012409 ENSG00000171864 PRND DOPPEL|DPL|PrPLP|dJ1068H6.4 prion like protein doppel protein-coding chr10-7890 chr10 49556663 49556873 + 8.25 0.000 Intergenic Intergenic -17230 NM_001277059 2074 Hs.49063 NM_000124 ENSG00000225830 ERCC6 ARMD5|CKN2|COFS|COFS1|CSB|CSB-PGBD3|POF11|RAD26|UVSS1 ERCC excision repair 6, chromatin remodeling factor protein-coding chr12-5375 chr12 119927299 119927509 + 8.25 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -50084 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr9-6587 chr9 125376204 125376414 + 8.25 0.000 Intergenic Intergenic 114483 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr11-9992 chr11 78753248 78753458 + 8.25 0.000 intron (NM_001098816, intron 19 of 33) MIRb|SINE|MIR -178489 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr8-4154 chr8 76893176 76893386 + 8.25 0.000 Intergenic Intergenic 73569 NR_130460 100422921 NR_130460 ENSG00000266712 MIR3149 - microRNA 3149 ncRNA chrX-906 chrX 119784752 119784962 + 8.25 0.000 Intergenic AluSx|SINE|Alu 2627 NR_002584 26779 Hs.675255 NR_002584 ENSG00000206622 SNORA69 RNU69|U69|U69A small nucleolar RNA, H/ACA box 69 snoRNA chr5-4747 chr5 52439920 52440130 + 8.25 0.000 Intergenic Intergenic -347891 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr8-3825 chr8 29418582 29418792 + 8.25 0.000 Intergenic Intergenic -68003 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr2-7951 chr2 61759121 61759331 + 8.25 0.000 Intergenic Intergenic 94834 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chrX-1048 chrX 115337901 115338111 + 8.25 0.000 Intergenic Intergenic 48291 NM_016383 51213 Hs.242183 NM_016383 ENSG00000102021 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding chr10-3083 chr10 11875461 11875671 + 8.25 0.000 intron (NR_038222, intron 2 of 5) intron (NR_038222, intron 2 of 5) 19144 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr8-4055 chr8 62975145 62975355 + 8.25 0.000 intron (NR_130764, intron 5 of 6) L1PA7|LINE|L1 -2611 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr20-2501 chr20 33478410 33478620 + 8.25 0.000 Intergenic AluJr|SINE|Alu -11581 NM_001032999 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr20-2732 chr20 49469216 49469426 + 8.25 0.000 intron (NM_004975, intron 1 of 1) L2a|LINE|L2 13347 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr7-8571 chr7 65238064 65238274 + 8.25 0.000 Intergenic Intergenic 97139 NR_146906 285905 Hs.567827 NM_182596 ENSG00000164669 INTS4P1 INTS4L1 integrator complex subunit 4 pseudogene 1 pseudo chr3-10479 chr3 134718590 134718800 + 8.25 0.000 Intergenic L3|LINE|CR1 -67673 NM_001350859 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr7-4286 chr7 17299452 17299662 + 8.25 0.000 intron (NM_001621, intron 1 of 10) intron (NM_001621, intron 1 of 10) 905 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr17-5805 chr17 64226308 64226518 + 8.25 0.000 intron (NM_018469, intron 1 of 11) intron (NM_018469, intron 1 of 11) 4321 NM_001288733 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr3-9735 chr3 67971972 67972182 + 8.25 0.000 Intergenic L1MA8|LINE|L1 -19515 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chrX-4343 chrX 47064592 47064802 + 8.25 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -13658 NM_004683 9104 Hs.77854 NM_004683 ENSG00000130988 RGN GNL|HEL-S-41|RC|SMP30 regucalcin protein-coding chr9-4164 chr9 12748067 12748277 + 8.25 0.000 intron (NR_125775, intron 3 of 3) intron (NR_125775, intron 3 of 3) -26848 NM_203403 286343 Hs.445356 NM_203403 ENSG00000153714 LURAP1L C9orf150|HYST0841|LRAP35b|bA3L8.2 leucine rich adaptor protein 1 like protein-coding chr11-4855 chr11 27972329 27972539 + 8.25 0.000 Intergenic Intergenic -84381 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr4-5910 chr4 140757791 140758001 + 8.25 0.000 Intergenic Intergenic -1511 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr5-6175 chr5 57779563 57779773 + 8.25 0.000 Intergenic Intergenic 119494 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr6-8131 chr6 129084801 129085011 + 8.25 0.000 intron (NM_000426, intron 3 of 64) intron (NM_000426, intron 3 of 64) 201765 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr11-8363 chr11 82559873 82560083 + 8.25 0.000 Intergenic Intergenic -156065 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr8-4856 chr8 40756358 40756568 + 8.25 0.000 intron (NM_024645, intron 3 of 6) L1ME4b|LINE|L1 141363 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr4-2660 chr4 744151 744361 + 8.25 0.000 intron (NM_001317836, intron 8 of 11) intron (NM_001317836, intron 8 of 11) 37592 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr17-4762 chr17 43631848 43632058 + 8.25 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 29610 NM_013999 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr16-4719 chr16 82456705 82456915 + 8.25 0.000 Intergenic Intergenic -170159 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr2-8129 chr2 80499269 80499479 + 8.25 0.000 intron (NM_001282599, intron 3 of 11) intron (NM_001282599, intron 3 of 11) 185995 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr5-4286 chr5 149532293 149532503 + 8.25 0.000 intron (NM_001271742, intron 1 of 9) AluYj4|SINE|Alu 17967 NM_001271742 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding chrX-2563 chrX 101415649 101415859 + 8.25 0.000 Intergenic Intergenic -2524 NR_028407 100131755 Hs.729062 NM_152583 ENSG00000196440 ARMCX4 CXorf35|GASP4 armadillo repeat containing X-linked 4 protein-coding chr9-4058 chr9 113213363 113213573 + 8.25 0.000 intron (NM_015258, intron 1 of 27) AluJr4|SINE|Alu 7809 NM_015258 23307 Hs.522351 NM_015258 ENSG00000119321 FKBP15 FKBP133|KIAA0674|PPP1R76 FKBP prolyl isomerase 15 protein-coding chr7-5788 chr7 78653425 78653635 + 8.25 0.000 intron (NM_001301128, intron 2 of 20) L1PA7|LINE|L1 306288 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr20-1275 chr20 46551839 46552049 + 8.25 0.000 Intergenic Intergenic -1290 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr11-6812 chr11 93236889 93237099 + 8.25 0.000 Intergenic Intergenic -39003 NM_152313 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr2-13419 chr2 142066399 142066609 + 8.25 0.000 intron (NM_018557, intron 1 of 90) MLT1D-int|LTR|ERVL-MaLR 65197 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr12-4597 chr12 33023365 33023575 + 8.25 0.000 Intergenic SVA_C|Retroposon|SVA -126624 NM_001005242 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr8-2700 chr8 96161016 96161226 + 8.25 0.000 promoter-TSS (NM_001001557) promoter-TSS (NM_001001557) -315 NM_001001557 392255 Hs.492277 NM_001001557 ENSG00000156466 GDF6 BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|SGM1|SYNS4 growth differentiation factor 6 protein-coding chr11-2640 chr11 46145481 46145691 + 8.25 0.000 Intergenic MER113A|DNA|hAT-Charlie -24601 NM_001352025 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr2-12833 chr2 95542471 95542681 + 8.25 0.000 Intergenic Intergenic -49425 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chr8-1933 chr8 42085774 42085984 + 8.25 0.000 intron (NR_136589, intron 1 of 1) intron (NR_136589, intron 1 of 1) -33892 NM_006766 7994 Hs.491577 NM_006766 ENSG00000083168 KAT6A MOZ|MRD32|MYST-3|MYST3|RUNXBP2|ZC2HC6A|ZNF220 lysine acetyltransferase 6A protein-coding chr1-10481 chr1 163407662 163407872 + 8.25 0.000 Intergenic L2b|LINE|L2 15424 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr19-6459 chr19 16951794 16952004 + 8.25 0.000 intron (NM_015692, intron 20 of 41) intron (NM_015692, intron 20 of 41) -54952 NR_147452 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr10-9024 chr10 122760267 122760477 + 8.25 0.000 intron (NR_003570, intron 3 of 27) MLT1E2|LTR|ERVL-MaLR 3678 NR_003570 375940 Hs.650695 NM_198577 ENSG00000176584 DMBT1P1 - deleted in malignant brain tumors 1 pseudogene 1 pseudo chr22-3972 chr22 38102182 38102392 + 8.25 0.000 intron (NM_025045, intron 4 of 13) HAL1M8|LINE|L1 8397 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr10-4690 chr10 132604041 132604251 + 8.25 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 66359 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chrX-2204 chrX 41190290 41190500 + 8.25 0.000 intron (NM_001039591, intron 26 of 44) intron (NM_001039591, intron 26 of 44) -85344 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr3-5408 chr3 160478452 160478662 + 8.25 0.000 intron (NR_148403, intron 1 of 20) L1PBa|LINE|L1 7190 NR_148403 100174949 NR_148401 ENSG00000248710 TRIM59-IFT80 IFT80-L TRIM59-IFT80 protein ncRNA chr11-2983 chr11 98393592 98393802 + 8.25 0.000 Intergenic L1PA8|LINE|L1 -627252 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr11-7083 chr11 121789964 121790174 + 8.25 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 309775 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr22-2828 chr22 43501619 43501829 + 8.25 0.000 intron (NM_001362786, intron 5 of 6) MIRb|SINE|MIR -14530 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr2-5376 chr2 98454637 98454847 + 8.25 0.000 intron (NM_001351428, intron 1 of 24) intron (NM_001351428, intron 1 of 24) 8732 NM_001351428 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr4-6104 chr4 15253386 15253596 + 8.25 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) -86497 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr6-8558 chr6 163084046 163084256 + 8.25 0.000 intron (NM_001080379, intron 3 of 4) intron (NM_001080379, intron 3 of 4) -29990 NR_110871 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr2-14440 chr2 222796810 222797020 + 8.25 0.000 Intergenic L2a|LINE|L2 -64121 NM_001354159 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr13-2346 chr13 35313412 35313622 + 8.25 0.000 intron (NM_015678, intron 36 of 57) intron (NM_015678, intron 36 of 57) 163172 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr18-2265 chr18 74432205 74432415 + 8.25 0.000 Intergenic MER1A|DNA|hAT-Charlie 22862 NR_131977 101927606 Hs.623809 NR_131977 ENSG00000259779 LINC01922 - long intergenic non-protein coding RNA 1922 ncRNA chr7-6315 chr7 140683704 140683914 + 8.25 0.000 intron (NM_052853, intron 4 of 7) MER20|DNA|hAT-Charlie 10864 NM_052853 90956 Hs.744886 NM_052853 ENSG00000133597 ADCK2 AARF aarF domain containing kinase 2 protein-coding chr15-3666 chr15 25718289 25718499 + 8.25 0.000 exon (NM_024490, exon 8 of 21) exon (NM_024490, exon 8 of 21) 130431 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr10-8864 chr10 112157208 112157418 + 8.25 0.000 exon (NM_020918, exon 19 of 22) exon (NM_020918, exon 19 of 22) 26452 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr2-7400 chr2 8516996 8517206 + 8.25 0.000 Intergenic Intergenic 66691 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr1-9641 chr1 47067238 47067448 + 8.25 0.000 5' UTR (NM_178134, exon 1 of 12) 5' UTR (NM_178134, exon 1 of 12) 112 NM_178134 199974 Hs.176588 NM_178134 ENSG00000186160 CYP4Z1 CYP4A20 cytochrome P450 family 4 subfamily Z member 1 protein-coding chr9-8048 chr9 96478865 96479075 + 8.25 0.000 intron (NM_014282, intron 5 of 7) L1ME1|LINE|L1 28801 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr13-4070 chr13 76206835 76207045 + 8.25 0.000 Intergenic Intergenic -271808 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr7-6992 chr7 112697695 112697905 + 8.25 0.000 intron (NR_110158, intron 5 of 7) SVA_C|Retroposon|SVA 75419 NR_110158 101928012 Hs.521131 NR_110158 ENSG00000223646 LOC101928012 - uncharacterized LOC101928012 ncRNA chr2-5263 chr2 58620976 58621186 + 8.25 0.000 intron (NR_033873, intron 1 of 13) L3|LINE|CR1 100328 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr16-5252 chr16 49458651 49458861 + 8.25 0.000 Intergenic Intergenic 59829 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr16-6573 chr16 66405076 66405286 + 8.25 0.000 TTS (NM_001795) TTS (NM_001795) -3343 NR_046242 100505865 Hs.314372 NR_046242 LINC00920 - long intergenic non-protein coding RNA 920 ncRNA chr9-5658 chr9 122555341 122555551 + 8.25 0.000 Intergenic Intergenic 2334 NM_001004457 138882 Hs.632682 NM_001004457 ENSG00000171501 OR1N2 OR9-23 olfactory receptor family 1 subfamily N member 2 protein-coding chr1-8684 chr1 216122701 216122911 + 8.25 0.000 intron (NM_206933, intron 21 of 71) intron (NM_206933, intron 21 of 71) 50341 NR_125992 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr12-4752 chr12 52306767 52306977 + 8.25 0.000 intron (NM_001320198, intron 9 of 10) intron (NM_001320198, intron 9 of 10) 14526 NM_002282 3889 Hs.720768 NM_002282 ENSG00000170523 KRT83 EKVP5|HB3|Hb-3|KRTHB3|MNLIX keratin 83 protein-coding chrX-4528 chrX 67575103 67575313 + 8.25 0.000 intron (NM_001011645, intron 2 of 8) intron (NM_001011645, intron 2 of 8) 30585 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr5-3050 chr5 22310344 22310554 + 8.25 0.000 intron (NM_001364104, intron 2 of 13) AluSx1|SINE|Alu -96599 NM_001364107 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr12-7160 chr12 48600974 48601184 + 8.25 0.000 Intergenic HERVIP10F-int|LTR|ERV1 -31033 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr10-4615 chr10 117363190 117363400 + 8.25 0.000 intron (NM_173791, intron 1 of 4) intron (NM_173791, intron 1 of 4) 12145 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr2-8181 chr2 87629589 87629799 + 8.25 0.000 promoter-TSS (NR_039634) promoter-TSS (NR_039634) -61 NR_039634 100616499 NR_039634 ENSG00000265507 MIR4435-1 mir-4435-1 microRNA 4435-1 ncRNA chr16-3187 chr16 84317289 84317499 + 8.25 0.000 intron (NM_001282467, intron 2 of 6) MER102b|DNA|hAT-Charlie 22516 NM_001282467 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr21-917 chr21 31294147 31294357 + 8.25 0.000 intron (NM_001353686, intron 2 of 27) intron (NM_001353686, intron 2 of 27) 50102 NM_001353694 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chrX-5253 chrX 138037165 138037375 + 8.25 0.000 Intergenic L1M1|LINE|L1 471143 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr19-6248 chr19 6860718 6860928 + 8.25 0.000 Intergenic AluSc5|SINE|Alu -26756 NM_001974 2015 Hs.2375 NM_001974 ENSG00000174837 ADGRE1 EMR1|TM7LN3 adhesion G protein-coupled receptor E1 protein-coding chr20-2587 chr20 38191035 38191245 + 8.25 0.000 Intergenic Intergenic -24632 NM_001323316 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr16-6146 chr16 22838720 22838930 + 8.25 0.000 intron (NM_006043, intron 1 of 1) intron (NM_006043, intron 1 of 1) 24663 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr12-6138 chr12 767578 767788 + 8.25 0.000 intron (NM_001184985, intron 1 of 27) intron (NM_001184985, intron 1 of 27) 14760 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr7-6114 chr7 121402135 121402345 + 8.25 0.000 Intergenic Intergenic -5872 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr7-6131 chr7 123001859 123002069 + 8.25 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -6264 NM_016945 50833 Hs.272395 NM_016945 ENSG00000128519 TAS2R16 BGLPT|T2R16 taste 2 receptor member 16 protein-coding chr7-3132 chr7 53871274 53871484 + 8.25 0.000 Intergenic L1PB2|LINE|L1 -59448 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr3-9843 chr3 78478577 78478787 + 8.25 0.000 Intergenic Intergenic -429719 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr2-7588 chr2 25449280 25449490 + 8.25 0.000 intron (NM_033147, intron 12 of 19) L1ME2|LINE|L1 -106795 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr6-3495 chr6 16565625 16565835 + 8.25 0.000 intron (NM_000332, intron 5 of 8) intron (NM_000332, intron 5 of 8) 194454 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr17-7887 chr17 43220891 43221101 + 8.25 0.000 TTS (NM_001291587) TTS (NM_001291587) 7600 NM_001363254 100874261 Hs.546898 NM_001363254 ENSG00000236383 CCDC200 LINC00854|TMEM106A-AS1 coiled-coil domain containing 200 protein-coding chr11-10325 chr11 109507377 109507587 + 8.25 0.000 Intergenic Intergenic 85292 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr10-7748 chr10 32901842 32902052 + 8.25 0.000 promoter-TSS (NR_132768) promoter-TSS (NR_132768) -475 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr20-963 chr20 37526837 37527047 + 8.25 0.000 intron (NM_001167820, intron 1 of 2) intron (NM_001167820, intron 1 of 2) 790 NM_001167822 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr18-2932 chr18 13444512 13444722 + 8.25 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -15330 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr9-5616 chr9 117489297 117489507 + 8.25 0.000 Intergenic AluSz|SINE|Alu -74345 NM_014010 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr12-6344 chr12 56931440 56931650 + 8.25 0.000 intron (NM_148897, intron 1 of 3) MIR3|SINE|MIR 2863 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chr1-5455 chr1 54386493 54386703 + 8.25 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 19796 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr4-5092 chr4 147546405 147546615 + 8.25 0.000 Intergenic (AAAT)n|Simple_repeat|Simple_repeat 65413 NR_148963 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr22-3307 chr22 17992004 17992214 + 8.25 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) -11148 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chr14-2219 chr14 103290644 103290854 + 8.25 0.000 Intergenic Intergenic -26535 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr11-7169 chr11 128942106 128942316 + 8.25 0.000 intron (NM_022112, intron 1 of 3) intron (NM_022112, intron 1 of 3) 1188 NM_001195195 63970 Hs.160953 NM_022112 ENSG00000120471 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding chr7-3720 chr7 66198319 66198529 + 8.25 0.000 Intergenic Intergenic -6910 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr17-3870 chr17 48618704 48618914 + 8.25 0.000 Intergenic Intergenic -3517 NM_024016 3218 Hs.514292 NM_024016 ENSG00000120068 HOXB8 HOX2|HOX2D|Hox-2.4 homeobox B8 protein-coding chr7-5494 chr7 43312199 43312409 + 8.25 0.000 intron (NM_001287059, intron 3 of 27) intron (NM_001287059, intron 3 of 27) 161409 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr19-5059 chr19 49903287 49903497 + 8.25 0.000 intron (NM_001258018, intron 3 of 9) intron (NM_001258018, intron 3 of 9) -6505 NM_152899 259307 Hs.574492 NM_152899 ENSG00000104951 IL4I1 FIG1|LAAO|LAO interleukin 4 induced 1 protein-coding chr15-2910 chr15 43489365 43489575 + 8.25 0.000 intron (NM_001355001, intron 4 of 28) MER102c|DNA|hAT-Charlie 3686 NM_001141979 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding chr7-5519 chr7 44523543 44523753 + 8.25 0.000 intron (NM_013389, intron 10 of 19) AluJo|SINE|Alu 17682 NM_001300967 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr10-4932 chr10 24467136 24467346 + 8.25 0.000 intron (NM_001282770, intron 1 of 11) intron (NM_001282770, intron 1 of 11) 710 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr3-5661 chr3 12388332 12388542 + 8.25 0.000 intron (NM_001330615, intron 3 of 5) intron (NM_001330615, intron 3 of 5) 36935 NM_015869 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr4-7046 chr4 28122838 28123048 + 8.25 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -696639 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr4-6486 chr4 152306755 152306965 + 8.25 0.000 Intergenic Intergenic -30795 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr22-2722 chr22 38529415 38529625 + 8.25 0.000 intron (NM_001363017, intron 10 of 11) intron (NM_001363017, intron 10 of 11) -23209 NM_001098504 10521 Hs.528305 NM_006386 ENSG00000100201 DDX17 P72|RH70 DEAD-box helicase 17 protein-coding chr2-10577 chr2 240811599 240811809 + 8.25 0.000 intron (NM_004321, intron 1 of 46) intron (NM_004321, intron 1 of 46) 8515 NM_001320705 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr9-8188 chr9 107336257 107336467 + 8.25 0.000 Intergenic L1MC4|LINE|L1 51593 NM_001244713 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chrX-2590 chrX 105045855 105046065 + 8.25 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 174733 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr6-3072 chr6 75012043 75012253 + 8.25 0.000 Intergenic Intergenic 116634 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chrX-3962 chrX 12356181 12356391 + 8.25 0.000 intron (NM_001368402, intron 2 of 17) LTR49|LTR|ERV1 -142394 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr3-6821 chr3 146687242 146687452 + 8.25 0.000 Intergenic Intergenic -81131 NM_001085420 389158 Hs.254692 NM_001085420 ENSG00000231213 PLSCR5 - phospholipid scramblase family member 5 protein-coding chrX-5306 chrX 143122858 143123068 + 8.25 0.000 Intergenic Intergenic 97035 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr3-3728 chr3 186931038 186931248 + 8.25 0.000 intron (NM_173216, intron 1 of 7) CpG 617 NM_173217 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr19-3948 chr19 52896967 52897177 + 8.25 0.000 intron (NM_001351775, intron 1 of 5) MER51C|LTR|ERV1 563 NM_001351775 162967 Hs.369632 NM_207333 ENSG00000182986 ZNF320 ZFPL zinc finger protein 320 protein-coding chr2-9346 chr2 226723675 226723885 + 8.25 0.000 Intergenic AluSx1|SINE|Alu -64987 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr9-8209 chr9 108972958 108973168 + 8.25 0.000 intron (NM_003798, intron 8 of 18) intron (NM_003798, intron 8 of 18) 38663 NM_017832 54942 Hs.29276 NM_017832 ENSG00000119328 ABITRAM C9orf6|CG-8|FAM206A|Simiate actin binding transcription modulator protein-coding chr10-6498 chr10 53291058 53291268 + 8.25 0.000 Intergenic Intergenic -519463 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr3-5982 chr3 47710120 47710330 + 8.25 0.000 intron (NM_003074, intron 9 of 27) AluSx1|SINE|Alu -48531 NR_145791 109623484 NR_145791 SNORD146 - small nucleolar RNA, C/D box 146 snoRNA chr3-5994 chr3 48321159 48321369 + 8.25 0.000 intron (NM_001080525, intron 1 of 4) intron (NM_001080525, intron 1 of 4) -4805 NR_031749 100313840 NR_031749 ENSG00000252466 MIR2115 - microRNA 2115 ncRNA chr2-4318 chr2 237290400 237290610 + 8.25 0.000 Intergenic Intergenic 123659 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr3-9731 chr3 67706964 67707174 + 8.25 0.000 intron (NR_109992, intron 3 of 6) intron (NR_109992, intron 3 of 6) 52372 NR_109993 101927111 Hs.518057 NR_109992 ENSG00000241316 SUCLG2-AS1 - SUCLG2 antisense RNA 1 (head to head) ncRNA chrX-2239 chrX 45921714 45921924 + 8.25 0.000 Intergenic L1ME1|LINE|L1 -70329 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr10-5745 chr10 102453069 102453279 + 8.25 0.000 intron (NR_038937, intron 4 of 4) intron (NR_038937, intron 4 of 4) -1631 NM_001363580 79946 Hs.225084 NM_024886 C10orf95 - chromosome 10 open reading frame 95 protein-coding chr2-3818 chr2 25739513 25739723 + 8.25 0.000 3' UTR (NM_018263, exon 12 of 12) 3' UTR (NM_018263, exon 12 of 12) 55073 NM_001369347 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr6-3377 chr6 42015208 42015418 + 8.25 0.000 intron (NM_001136017, intron 1 of 4) intron (NM_001136017, intron 1 of 4) 33581 NM_001136126 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr10-4213 chr10 119243440 119243650 + 8.25 0.000 intron (NM_005308, intron 1 of 15) MLT1K|LTR|ERVL-MaLR 35974 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chrX-5031 chrX 120557657 120557867 + 8.25 0.000 intron (NM_001369145, intron 2 of 19) intron (NM_001369145, intron 2 of 19) 2136 NM_001369145 8450 Hs.102914 NM_003588 ENSG00000158290 CUL4B CUL-4B|MRXHF2|MRXS15|MRXSC|SFM2 cullin 4B protein-coding chr17-7989 chr17 48816530 48816740 + 8.25 0.000 intron (NM_001130918, intron 1 of 15) intron (NM_001130918, intron 1 of 15) 455 NM_001366314 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr13-2187 chr13 19605206 19605416 + 8.25 0.000 Intergenic Intergenic 18193 NR_046988 100874136 NR_046988 LINC00350 - long intergenic non-protein coding RNA 350 ncRNA chr10-9121 chr10 127250678 127250888 + 8.25 0.000 intron (NM_001290223, intron 28 of 51) AluSx1|SINE|Alu -54192 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr19-4583 chr19 11478342 11478552 + 8.25 0.000 intron (NM_032281, intron 1 of 6) intron (NM_032281, intron 1 of 6) 2599 NM_001420 1995 Hs.1701 NM_001420 ENSG00000196361 ELAVL3 HUC|HUCL|PLE21 ELAV like RNA binding protein 3 protein-coding chr2-7235 chr2 223697468 223697678 + 8.25 0.000 Intergenic Intergenic -95212 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr19-4267 chr19 267088 267298 + 8.25 0.000 Intergenic CpG 23946 NM_177543 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr1-5502 chr1 161119786 161119996 + 8.25 0.000 exon (NM_001185093, exon 4 of 6) exon (NM_001185093, exon 4 of 6) 1773 NM_001185094 4817 Hs.146406 NM_005600 ENSG00000158793 NIT1 - nitrilase 1 protein-coding chr4-6492 chr4 153647144 153647354 + 8.25 0.000 intron (NR_134873, intron 2 of 2) MSTD|LTR|ERVL-MaLR 7081 NR_134873 100419170 Hs.382102 NR_134873 ENSG00000250771 LOC100419170 - toll like receptor 2 pseudogene pseudo chr11-9978 chr11 77759724 77759934 + 8.25 0.000 intron (NM_016578, intron 2 of 15) intron (NM_016578, intron 2 of 15) 61005 NM_016578 51773 Hs.420229 NM_016578 ENSG00000048649 RSF1 HBXAP|RSF-1|XAP8|p325 remodeling and spacing factor 1 protein-coding chr19-3402 chr19 15988142 15988352 + 8.25 0.000 Intergenic Intergenic -27387 NR_026828 126536 Hs.131824 NR_026828 ENSG00000205396 LINC00661 - long intergenic non-protein coding RNA 661 ncRNA chr1-11501 chr1 150844853 150845063 + 8.25 0.000 intron (NM_001286036, intron 4 of 21) AluSx1|SINE|Alu 31641 NM_178427 405 Hs.632446 NM_001668 ENSG00000143437 ARNT HIF-1-beta|HIF-1beta|HIF1-beta|HIF1B|HIF1BETA|TANGO|bHLHe2 aryl hydrocarbon receptor nuclear translocator protein-coding chr6-4900 chr6 93775076 93775286 + 8.25 0.000 intron (NR_015362, intron 8 of 9) intron (NR_015362, intron 8 of 9) 56878 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr11-9323 chr11 45960018 45960228 + 8.25 0.000 intron (NR_147890, intron 9 of 18) L1MB5|LINE|L1 37467 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr10-8019 chr10 62708548 62708758 + 8.25 0.000 Intergenic Intergenic -96067 NM_032804 84890 Hs.99821 NM_032804 ENSG00000181915 ADO C10orf22 2-aminoethanethiol dioxygenase protein-coding chr12-4781 chr12 53423747 53423957 + 8.25 0.000 promoter-TSS (NM_001164691) promoter-TSS (NM_001164691) -3 NM_001164691 269 Hs.659889 NM_020547 ENSG00000135409 AMHR2 AMHR|MISR2|MISRII|MRII anti-Mullerian hormone receptor type 2 protein-coding chr2-4447 chr2 203513836 203514046 + 8.25 0.000 intron (NM_001329728, intron 1 of 15) AluSz|SINE|Alu 21360 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr6-4656 chr6 50386782 50386992 + 8.25 0.000 Intergenic Intergenic -326657 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr14-3310 chr14 85830482 85830692 + 8.25 0.000 Intergenic SVA_D|Retroposon|SVA -104091 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr13-3313 chr13 53545396 53545606 + 8.25 0.000 Intergenic L1M3e|LINE|L1 -269918 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr9-8222 chr9 109561982 109562192 + 8.25 0.000 Intergenic Intergenic -50542 NR_037493 100500898 NR_037493 ENSG00000263861 MIR3927 - microRNA 3927 ncRNA chr8-1683 chr8 51534826 51535036 + 8.25 0.000 intron (NM_144651, intron 4 of 22) SVA_E|Retroposon|SVA 274514 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr1-11437 chr1 70462681 70462891 + 8.25 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 51518 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr2-3099 chr2 133568326 133568536 + 8.25 0.000 promoter-TSS (NM_207363) promoter-TSS (NM_207363) 32 NM_207363 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chrX-2444 chrX 80854968 80855178 + 8.25 0.000 Intergenic MER4-int|LTR|ERV1 -45196 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr6-5504 chr6 164255760 164255970 + 8.25 0.000 Intergenic Intergenic 566198 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr17-3104 chr17 8010142 8010352 + 8.25 0.000 intron (NM_000180, intron 8 of 19) intron (NM_000180, intron 8 of 19) 7577 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr12-5329 chr12 114425438 114425648 + 8.25 0.000 Intergenic Intergenic -17101 NM_000192 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box transcription factor 5 protein-coding chr1-9702 chr1 51976649 51976859 + 8.25 0.000 intron (NM_002867, intron 2 of 4) intron (NM_002867, intron 2 of 4) 13946 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr19-6171 chr19 4730338 4730548 + 8.25 0.000 Intergenic L2a|LINE|L2 -6601 NR_158699 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr21-693 chr21 26591708 26591918 + 8.25 0.000 Intergenic Intergenic -18527 NM_052954 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr7-2706 chr7 27520895 27521105 + 8.25 0.000 Intergenic L2c|LINE|L2 -94974 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr7-4263 chr7 2906298 2906508 + 8.25 0.000 3' UTR (NM_032415, exon 25 of 25) 3' UTR (NM_032415, exon 25 of 25) -62095 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr11-8352 chr11 79735500 79735710 + 8.25 0.000 Intergenic Intergenic -294575 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr5-3836 chr5 115246419 115246629 + 8.25 0.000 intron (NM_005023, intron 2 of 8) intron (NM_005023, intron 2 of 8) 16353 NM_005023 5229 Hs.254006 NM_005023 ENSG00000164219 PGGT1B BGGI|GGTI protein geranylgeranyltransferase type I subunit beta protein-coding chr17-3161 chr17 63856981 63857191 + 8.25 0.000 promoter-TSS (NR_002947) promoter-TSS (NR_002947) 70 NR_002947 146771 Hs.629177 NR_002947 ENSG00000240280 TCAM1P TCAM1 testicular cell adhesion molecule 1, pseudogene pseudo chr16-4141 chr16 4247249 4247459 + 8.25 0.000 intron (NR_039999, intron 2 of 2) intron (NR_039999, intron 2 of 2) -5274 NM_001323668 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr19-4656 chr19 16463922 16464132 + 8.25 0.000 intron (NM_021235, intron 1 of 22) intron (NM_021235, intron 1 of 22) 7943 NM_001258374 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr17-4763 chr17 43643339 43643549 + 8.25 0.000 intron (NM_013999, intron 1 of 1) G-rich|Low_complexity|Low_complexity 18119 NM_013999 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chrX-2232 chrX 45166676 45166886 + 8.25 0.000 intron (NM_024689, intron 2 of 2) intron (NM_024689, intron 2 of 2) 34095 NM_176819 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr20-1220 chr20 23225423 23225633 + 8.25 0.000 Intergenic Intergenic -92892 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr3-5041 chr3 37462692 37462902 + 8.25 0.000 intron (NM_002207, intron 1 of 27) intron (NM_002207, intron 1 of 27) 10656 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr11-5496 chr11 80283434 80283644 + 8.25 0.000 Intergenic Intergenic 479264 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr7-3923 chr7 128167977 128168187 + 8.25 0.000 Intergenic CpG -39790 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr14-4445 chr14 33320118 33320328 + 8.25 0.000 intron (NM_173159, intron 3 of 11) intron (NM_173159, intron 3 of 11) 381344 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr20-2651 chr20 43985578 43985788 + 8.25 0.000 intron (NM_001098797, intron 2 of 8) MIR|SINE|MIR 39787 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr19-6892 chr19 45336561 45336771 + 8.25 0.000 Intergenic Intergenic -4084 NM_177417 147700 Hs.298079 NM_145275 ENSG00000104892 KLC3 KLC2|KLC2L|KLCt|KNS2B kinesin light chain 3 protein-coding chr8-6013 chr8 23097881 23098091 + 8.25 0.000 intron (NR_046173, intron 2 of 3) MER21-int|LTR|ERVL -4828 NM_003841 8794 Hs.655801 NM_003841 ENSG00000173535 TNFRSF10C CD263|DCR1|DCR1-TNFR|LIT|TRAIL-R3|TRAILR3|TRID TNF receptor superfamily member 10c protein-coding chr1-6757 chr1 70167798 70168008 + 8.25 0.000 intron (NM_017768, intron 9 of 14) AluSz|SINE|Alu 37676 NM_017768 55631 Hs.147836 NM_017768 ENSG00000066557 LRRC40 dJ677H15.1 leucine rich repeat containing 40 protein-coding chr8-5492 chr8 53447049 53447259 + 8.25 0.000 Intergenic L1MB5|LINE|L1 76811 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr11-10489 chr11 118295744 118295954 + 8.25 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -8731 NM_000733 916 Hs.3003 NM_000733 ENSG00000198851 CD3E IMD18|T3E|TCRE CD3e molecule protein-coding chr2-12966 chr2 103983293 103983503 + 8.25 0.000 Intergenic Intergenic 424934 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr1-11365 chr1 38028033 38028243 + 8.25 0.000 Intergenic Intergenic 15404 NM_016037 51118 Hs.472038 NM_016037 ENSG00000183520 UTP11 CGI-94|CGI94|UTP11L UTP11 small subunit processome component protein-coding chr2-14419 chr2 221786905 221787115 + 8.25 0.000 Intergenic MIR3|SINE|MIR -212808 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-7533 chr3 182400430 182400640 + 8.25 0.000 Intergenic Intergenic 85827 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr5-7178 chr5 5644399 5644609 + 8.25 0.000 Intergenic Intergenic 221827 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr1-7671 chr1 16713561 16713771 + 8.25 0.000 intron (NR_026567, intron 1 of 10) L2a|LINE|L2 6491 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr3-6745 chr3 139721428 139721638 + 8.25 0.000 Intergenic Intergenic -43483 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr8-3083 chr8 23133710 23133920 + 8.25 0.000 Intergenic MER4A1|LTR|ERV1 30212 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr2-13416 chr2 141859634 141859844 + 8.25 0.000 intron (NM_018557, intron 1 of 90) L1MA6|LINE|L1 271962 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr4-8012 chr4 117127605 117127815 + 8.25 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -42134 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr17-2528 chr17 18794938 18795148 + 8.25 0.000 intron (NM_001316924, intron 3 of 5) AluSx|SINE|Alu 6008 NM_001316920 51030 Hs.87295 NM_016078 ENSG00000171928 TVP23B CGI-148|FAM18B|FAM18B1|NPD008|YDR084C trans-golgi network vesicle protein 23 homolog B protein-coding chr3-11128 chr3 187365506 187365716 + 8.25 0.000 Intergenic MIR3|SINE|MIR -2774 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding chr2-6904 chr2 99841742 99841952 + 8.25 0.000 intron (NM_001025108, intron 6 of 23) MIR3|SINE|MIR 263736 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr1-6853 chr1 109084804 109085014 + 8.25 0.000 Intergenic AluJb|SINE|Alu -5855 NR_136243 56900 Hs.82933 NM_020141 ENSG00000215717 TMEM167B AD-020|C1orf119 transmembrane protein 167B protein-coding chr21-1427 chr21 19011602 19011812 + 8.25 0.000 Intergenic Intergenic -251895 NR_109925 101927797 Hs.551743 NR_109925 MIR548XHG - MIR548X host gene ncRNA chr17-5606 chr17 48412040 48412250 + 8.25 0.000 intron (NM_001075099, intron 1 of 12) L1MC3|LINE|L1 18069 NM_003726 8631 Hs.316931 NM_003726 ENSG00000141293 SKAP1 HEL-S-81p|SCAP1|SKAP55 src kinase associated phosphoprotein 1 protein-coding chr13-3445 chr13 107189699 107189909 + 8.25 0.000 intron (NM_001080396, intron 2 of 2) intron (NM_001080396, intron 2 of 2) 131159 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chr6-6815 chr6 6841995 6842205 + 8.25 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -219274 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr5-2276 chr5 37738257 37738467 + 8.25 0.000 intron (NM_001345998, intron 17 of 17) intron (NM_001345998, intron 17 of 17) 96460 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr11-6738 chr11 82464464 82464674 + 8.25 0.000 Intergenic L1PA16|LINE|L1 -60656 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chrX-4680 chrX 83976896 83977106 + 8.25 0.000 Intergenic Intergenic 115855 NM_021118 1538 Hs.444230 NM_021118 ENSG00000183035 CYLC1 CYCL1 cylicin 1 protein-coding chrX-3967 chrX 12753944 12754154 + 8.25 0.000 Intergenic (ATAC)n|Simple_repeat|Simple_repeat -37306 NM_002765 5634 Hs.654581 NM_002765 ENSG00000101911 PRPS2 PRSII phosphoribosyl pyrophosphate synthetase 2 protein-coding chr13-2438 chr13 47927645 47927855 + 8.25 0.000 Intergenic L2c|LINE|L2 4872 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr17-3330 chr17 73286835 73287045 + 8.25 0.000 intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) -25060 NM_001129885 642843 Hs.534707 NM_001129885 ENSG00000187959 CPSF4L - cleavage and polyadenylation specific factor 4 like protein-coding chr9-8336 chr9 115591681 115591891 + 8.25 0.000 Intergenic Intergenic 152453 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr7-3621 chr7 36806358 36806568 + 8.25 0.000 Intergenic LTR16|LTR|ERVL -81914 NM_001177507 313 Hs.488007 NM_001637 ENSG00000136250 AOAH - acyloxyacyl hydrolase protein-coding chr15-3078 chr15 62699981 62700191 + 8.25 0.000 intron (NM_015059, intron 13 of 55) intron (NM_015059, intron 13 of 55) 52775 NM_015059 83660 Hs.569438 NM_015059 ENSG00000171914 TLN2 ILWEQ talin 2 protein-coding chr2-3840 chr2 28813125 28813335 + 8.25 0.000 intron (NM_001142634, intron 1 of 6) intron (NM_001142634, intron 1 of 6) 2396 NM_001142634 245711 Hs.511956 NM_182756 ENSG00000163806 SPDYA RINGO3|RINGOA|SPDY1|SPY1 speedy/RINGO cell cycle regulator family member A protein-coding chr2-11129 chr2 136308316 136308526 + 8.25 0.000 Intergenic Intergenic -190266 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr7-3174 chr7 99975507 99975717 + 8.25 0.000 intron (NM_001185, intron 1 of 3) intron (NM_001185, intron 1 of 3) 419 NM_001185 563 Hs.546239 NM_001185 ENSG00000160862 AZGP1 ZA2G|ZAG alpha-2-glycoprotein 1, zinc-binding protein-coding chr7-8789 chr7 81943284 81943494 + 8.25 0.000 Intergenic MSTB|LTR|ERVL-MaLR -65788 NR_110077 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr2-12457 chr2 59833639 59833849 + 8.25 0.000 Intergenic MamTip2|DNA|hAT-Tip100 549292 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr7-8223 chr7 33374717 33374927 + 8.25 0.000 intron (NM_198428, intron 17 of 22) AluSp|SINE|Alu 245258 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr3-7554 chr3 194396896 194397106 + 8.25 0.000 exon (NM_004488, exon 2 of 2) exon (NM_004488, exon 2 of 2) 2265 NM_004488 2814 Hs.73734 NM_004488 ENSG00000178732 GP5 CD42d|GPV glycoprotein V platelet protein-coding chr13-3584 chr13 27368521 27368731 + 8.25 0.000 Intergenic Intergenic -55993 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr3-4663 chr3 40335555 40335765 + 8.25 0.000 Intergenic L1ME4a|LINE|L1 25953 NM_005875 10289 Hs.315230 NM_005875 ENSG00000114784 EIF1B GC20 eukaryotic translation initiation factor 1B protein-coding chr11-4665 chr11 57478357 57478567 + 8.25 0.000 TTS (NM_178570) TTS (NM_178570) 17934 NM_178570 349667 Hs.502618 NM_178570 ENSG00000186907 RTN4RL2 NGRH1|NgR2 reticulon 4 receptor like 2 protein-coding chr8-7251 chr8 128267522 128267732 + 8.25 0.000 Intergenic Intergenic 117511 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr7-7501 chr7 101169715 101169925 + 8.25 0.000 TTS (NM_198571) TTS (NM_198571) -4251 NM_003378 7425 Hs.587325 NM_003378 ENSG00000128564 VGF SCG7|SgVII VGF nerve growth factor inducible protein-coding chrX-1476 chrX 119906212 119906422 + 8.25 0.000 intron (NM_001008534, intron 4 of 5) AluSc8|SINE|Alu 10344 NM_001008534 158798 Hs.592245 NM_178813 ENSG00000186471 AKAP14 AKAP28|PRKA14 A-kinase anchoring protein 14 protein-coding chr1-8276 chr1 38672794 38673004 + 8.25 0.000 Intergenic Intergenic 186873 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr9-3543 chr9 36995934 36996144 + 8.25 0.000 intron (NM_001280554, intron 4 of 8) intron (NM_001280554, intron 4 of 8) 38229 NM_016734 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr18-1969 chr18 38026806 38027016 + 8.25 0.000 Intergenic Intergenic 369776 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr2-5465 chr2 127696576 127696786 + 8.25 0.000 Intergenic LTR45|LTR|ERV1 -4816 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding chr4-4354 chr4 38674872 38675082 + 8.25 0.000 intron (NM_016531, intron 1 of 5) intron (NM_016531, intron 1 of 5) -10349 NR_026804 79667 Hs.29725 NM_024614 ENSG00000231160 KLF3-AS1 - KLF3 antisense RNA 1 ncRNA chr12-5449 chr12 123214494 123214704 + 8.25 0.000 intron (NR_103517, intron 8 of 23) intron (NR_103517, intron 8 of 23) 18542 NM_022782 10198 Hs.577404 NM_022782 ENSG00000051825 MPHOSPH9 MPP-9|MPP9 M-phase phosphoprotein 9 protein-coding chr11-7885 chr11 124639223 124639433 + 8.25 0.000 intron (NM_001199922, intron 10 of 11) MLT1I|LTR|ERVL-MaLR 16464 NM_032811 84897 Hs.436410 NM_032811 ENSG00000154144 TBRG1 NIAM|TB-5 transforming growth factor beta regulator 1 protein-coding chr6-6565 chr6 136417431 136417641 + 8.25 0.000 intron (NM_001198611, intron 2 of 16) MIRc|SINE|MIR 49339 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr14-2446 chr14 75867970 75868180 + 8.25 0.000 intron (NM_015072, intron 29 of 31) intron (NM_015072, intron 29 of 31) 113920 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr4-4335 chr4 35584616 35584826 + 8.25 0.000 Intergenic Intergenic 659218 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr17-4398 chr17 29959889 29960099 + 8.25 0.000 intron (NR_026738, intron 3 of 15) L1M1|LINE|L1 18360 NM_198529 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr11-8940 chr11 18168697 18168907 + 8.25 0.000 Intergenic Intergenic -4035 NM_054032 117196 Hs.632138 NM_054032 ENSG00000179817 MRGPRX4 GPCR|MRGX4|SNSR6 MAS related GPR family member X4 protein-coding chr16-6673 chr16 69772855 69773065 + 8.25 0.000 intron (NM_001270455, intron 1 of 8) HAL1|LINE|L1 10628 NM_007014 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr10-7425 chr10 5582478 5582688 + 8.25 0.000 Intergenic MER5A|DNA|hAT-Charlie 13535 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr3-10455 chr3 133388104 133388314 + 8.25 0.000 intron (NM_023943, intron 4 of 5) intron (NM_023943, intron 4 of 5) -11847 NM_003571 8419 Hs.659862 NM_003571 ENSG00000170819 BFSP2 CP47|CP49|CTRCT12|LIFL-L|PHAKOSIN beaded filament structural protein 2 protein-coding chr12-3017 chr12 131619976 131620186 + 8.25 0.000 Intergenic Intergenic 28040 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr1-12592 chr1 33656374 33656584 + 8.25 0.000 intron (NM_052896, intron 27 of 69) intron (NM_052896, intron 27 of 69) 183834 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr5-9030 chr5 168204227 168204437 + 8.25 0.000 intron (NM_001368145, intron 17 of 26) intron (NM_001368145, intron 17 of 26) 28040 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA chr12-5934 chr12 74925124 74925334 + 8.25 0.000 Intergenic L1MA8|LINE|L1 284519 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding chr1-16087 chr1 203215467 203215677 + 8.25 0.000 TTS (NR_045785) TTS (NR_045785) 14101 NR_045785 1118 Hs.201688 NM_003465 ENSG00000133063 CHIT1 CHI3|CHIT|CHITD chitinase 1 protein-coding chr9-7039 chr9 122716049 122716259 + 8.25 0.000 Intergenic Intergenic -7836 NM_001005235 254973 Hs.626838 NM_001005235 ENSG00000136939 OR1L4 OR1L5|OR9-29|OR9-E|OST046 olfactory receptor family 1 subfamily L member 4 protein-coding chr7-9518 chr7 139185800 139186010 + 8.25 0.000 intron (NM_001144920, intron 16 of 16) intron (NM_001144920, intron 16 of 16) -45332 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr7-6592 chr7 87060752 87060962 + 8.25 0.000 Intergenic L1ME4a|LINE|L1 -1203 NM_001142749 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr12-7765 chr12 95413077 95413287 + 8.25 0.000 Intergenic Intergenic -60970 NM_001317183 10988 Hs.444986 NM_006838 ENSG00000111142 METAP2 MAP2|MNPEP|p67eIF2 methionyl aminopeptidase 2 protein-coding chr1-13777 chr1 17631875 17632085 + 8.25 0.000 intron (NR_137287, intron 15 of 29) MIRb|SINE|MIR 13667 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr22-3306 chr22 17896559 17896769 + 8.25 0.000 intron (NM_001122731, intron 7 of 19) intron (NM_001122731, intron 7 of 19) 10222 NM_001136004 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr8-4365 chr8 101820617 101820827 + 8.25 0.000 intron (NM_001040628, intron 4 of 7) intron (NM_001040628, intron 4 of 7) -29753 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr22-1494 chr22 36271387 36271597 + 8.25 0.000 Intergenic L1P3|LINE|L1 15415 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr12-8163 chr12 121484187 121484397 + 8.25 0.000 intron (NM_001005366, intron 12 of 22) intron (NM_001005366, intron 12 of 22) -39940 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr5-8305 chr5 115422235 115422445 + 8.25 0.000 Intergenic L2|LINE|L2 122435 NM_020177 56929 Hs.47367 NM_020177 ENSG00000145780 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog C protein-coding chr5-6306 chr5 123324875 123325085 + 8.25 0.000 Intergenic L1PB2|LINE|L1 98612 NM_153223 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr15-1839 chr15 48385111 48385321 + 8.25 0.000 Intergenic Intergenic 53019 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr9-5012 chr9 25557691 25557901 + 8.25 0.000 Intergenic MIR|SINE|MIR 121062 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr11-9184 chr11 36122322 36122532 + 8.25 0.000 intron (NM_001304263, intron 3 of 4) MIRb|SINE|MIR -44526 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr21-880 chr21 43992128 43992338 + 8.25 0.000 Intergenic Intergenic -20076 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr10-8308 chr10 78173018 78173228 + 8.25 0.000 Intergenic LTR16C|LTR|ERVL -75502 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA chr5-4645 chr5 35376152 35376362 + 8.25 0.000 Intergenic L3|LINE|CR1 -145770 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr5-3748 chr5 43674595 43674805 + 8.25 0.000 intron (NM_012343, intron 17 of 21) intron (NM_012343, intron 17 of 21) -71470 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr1-15239 chr1 112108950 112109160 + 8.25 0.000 Intergenic L1M3f|LINE|L1 118519 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr1-10506 chr1 166480655 166480865 + 8.25 0.000 intron (NR_146890, intron 1 of 2) intron (NR_146890, intron 1 of 2) 9279 NR_146890 105371590 Hs.575926 NR_146890 ENSG00000234142 LINC01675 - long intergenic non-protein coding RNA 1675 ncRNA chr5-6210 chr5 71780274 71780484 + 8.25 0.000 Intergenic Intergenic 61104 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr13-2461 chr13 49955038 49955248 + 8.25 0.000 Intergenic MER21-int|LTR|ERVL -18642 NM_001127482 57213 Hs.44235 NM_020456 ENSG00000123178 SPRYD7 C13orf1|CLLD6 SPRY domain containing 7 protein-coding chr1-8738 chr1 239844340 239844550 + 8.25 0.000 intron (NM_001347716, intron 7 of 7) L3b|LINE|CR1 55427 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr16-2470 chr16 87556959 87557169 + 8.25 0.000 Intergenic Intergenic -44771 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr6-5287 chr6 139820227 139820437 + 8.25 0.000 intron (NR_038399, intron 1 of 2) intron (NR_038399, intron 1 of 2) -34518 NR_138541 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr6-6514 chr6 123580665 123580875 + 8.25 0.000 intron (NM_001256020, intron 1 of 8) LTR24B|LTR|ERV1 56180 NM_006073 10345 Hs.144744 NM_006073 ENSG00000186439 TRDN CPVT5|TDN|TRISK triadin protein-coding chr8-5084 chr8 42622451 42622661 + 8.25 0.000 Intergenic AluSq|SINE|Alu -74810 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr2-12819 chr2 91972299 91972509 + 8.25 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 31271 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo chr11-9079 chr11 30591323 30591533 + 8.25 0.000 Intergenic L2a|LINE|L2 -5075 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr1-6184 chr1 203336309 203336519 + 8.25 0.000 Intergenic Intergenic 14708 NR_103757 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr2-14496 chr2 227129057 227129267 + 8.25 0.000 intron (NM_000092, intron 4 of 47) MIRc|SINE|MIR 35397 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding KI270442.1-10 KI270442.1 233064 233274 + 8.25 0.000 NA NA NA NA chr17-4214 chr17 34844375 34844585 + 8.25 0.000 Intergenic L2c|LINE|L2 116980 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr3-4058 chr3 78604576 78604786 + 8.25 0.000 intron (NM_002941, intron 29 of 30) MamSINE1|SINE|tRNA-RTE 414778 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr11-2956 chr11 75410118 75410328 + 8.25 0.000 intron (NM_001256802, intron 6 of 6) SVA_E|Retroposon|SVA 5802 NR_000025 114599 Hs.689080 NR_000025 ENSG00000207445 SNORD15B RNU15B|U15B small nucleolar RNA, C/D box 15B snoRNA chr16-3194 chr16 84672481 84672691 + 8.25 0.000 Intergenic MER5A|DNA|hAT-Charlie 24075 NM_024731 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr18-1602 chr18 42526733 42526943 + 8.25 0.000 intron (NR_046454, intron 6 of 6) intron (NR_046454, intron 6 of 6) 340170 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr12-6051 chr12 112601799 112602009 + 8.25 0.000 intron (NM_001347952, intron 1 of 21) AluJb|SINE|Alu 26668 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr7-4417 chr7 102276761 102276971 + 8.25 0.000 intron (NM_001913, intron 17 of 22) L1MB7|LINE|L1 -8275 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr11-6348 chr11 63466186 63466396 + 8.25 0.000 exon (NM_001146728, exon 5 of 6) exon (NM_001146728, exon 5 of 6) 24876 NM_001146729 117245 Hs.410316 NM_054108 ENSG00000168004 PLAAT5 HRASLS5|HRLP5|HRSL5|PLAAT-5|RLP1|iNAT phospholipase A and acyltransferase 5 protein-coding chr15-3981 chr15 48554232 48554442 + 8.25 0.000 intron (NM_000138, intron 6 of 65) intron (NM_000138, intron 6 of 65) 91451 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr7-5796 chr7 79981778 79981988 + 8.25 0.000 Intergenic Intergenic -152948 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr10-2515 chr10 44993948 44994158 + 8.25 0.000 non-coding (NR_126421, exon 4 of 4) non-coding (NR_126421, exon 4 of 4) 6857 NM_001039380 220979 Hs.707791 NM_001039380 C10orf25 - chromosome 10 open reading frame 25 protein-coding chr10-8513 chr10 90917820 90918030 + 8.25 0.000 intron (NM_014391, intron 4 of 8) intron (NM_014391, intron 4 of 8) 3350 NM_014391 27063 Hs.448589 NM_014391 ENSG00000148677 ANKRD1 ALRP|C-193|CARP|CVARP|MCARP|bA320F15.2 ankyrin repeat domain 1 protein-coding chr1-5340 chr1 228978533 228978743 + 8.25 0.000 Intergenic Intergenic 196163 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr8-3590 chr8 137738818 137739028 + 8.25 0.000 Intergenic L1PA7|LINE|L1 -325335 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr3-9759 chr3 69633878 69634088 + 8.25 0.000 Intergenic L1PA6|LINE|L1 -105481 NM_001354606 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr5-5340 chr5 130758447 130758657 + 8.25 0.000 Intergenic Intergenic 406704 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr18-2005 chr18 42114421 42114631 + 8.25 0.000 Intergenic Intergenic -72142 NR_046174 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr8-4888 chr8 72005144 72005354 + 8.25 0.000 intron (NR_033652, intron 4 of 4) CpG 70335 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr13-4172 chr13 88487779 88487989 + 8.25 0.000 Intergenic Intergenic -52945 NR_047021 100874168 Hs.126406 NR_047021 LINC00433 - long intergenic non-protein coding RNA 433 ncRNA chr8-6803 chr8 95873684 95873894 + 8.25 0.000 Intergenic L1PA13|LINE|L1 74559 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr18-551 chr18 55983468 55983678 + 8.25 0.000 Intergenic LTR85c|LTR|Gypsy? -58705 NR_146511 102724698 NR_146510 ENSG00000267057 LINC01905 - long intergenic non-protein coding RNA 1905 ncRNA chr20-2998 chr20 44738876 44739086 + 8.25 0.000 intron (NR_132377, intron 1 of 4) MLT1J2|LTR|ERVL-MaLR -6884 NM_022358 60598 Hs.528664 NM_022358 ENSG00000124249 KCNK15 K2p15.1|KCNK11|KCNK14|KT3.3|TASK-5|TASK5|dJ781B1.1 potassium two pore domain channel subfamily K member 15 protein-coding chr11-6886 chr11 103682991 103683201 + 8.25 0.000 Intergenic Intergenic -166810 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr2-7585 chr2 25347465 25347675 + 8.25 0.000 Intergenic Intergenic -4980 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr1-14156 chr1 32459049 32459259 + 8.25 0.000 Intergenic MER11A|LTR|ERVK -5918 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr1-15401 chr1 151710688 151710898 + 8.25 0.000 intron (NM_007185, intron 2 of 12) L3b|LINE|CR1 6010 NM_007185 11189 Hs.26047 NM_007185 ENSG00000159409 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP Elav-like family member 3 protein-coding chr20-1662 chr20 32092007 32092217 + 8.25 0.000 intron (NM_001172131, intron 10 of 12) intron (NM_001172131, intron 10 of 12) -17602 NM_014742 9777 Hs.654665 NM_014742 ENSG00000101337 TM9SF4 dJ836N17.2 transmembrane 9 superfamily member 4 protein-coding chr14-3307 chr14 85617779 85617989 + 8.25 0.000 intron (NM_001346143, intron 1 of 1) intron (NM_001346143, intron 1 of 1) 84535 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr9-3822 chr9 129609857 129610067 + 8.25 0.000 intron (NM_001286796, intron 1 of 3) intron (NM_001286796, intron 1 of 3) 1078 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr6-7037 chr6 25100134 25100344 + 8.25 0.000 intron (NR_002174, intron 7 of 12) intron (NR_002174, intron 7 of 12) 37584 NR_002174 8418 Hs.484918 NR_002174 ENSG00000168405 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo chr14-3346 chr14 90096042 90096252 + 8.25 0.000 intron (NM_022054, intron 1 of 1) MER21B|LTR|ERVL 34153 NM_022054 56659 Hs.510191 NM_022054 ENSG00000152315 KCNK13 K2p13.1|THIK-1|THIK1 potassium two pore domain channel subfamily K member 13 protein-coding chr3-5873 chr3 35737852 35738062 + 8.25 0.000 intron (NM_016300, intron 16 of 19) intron (NM_016300, intron 16 of 19) -6519 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr8-6314 chr8 46277837 46278047 + 8.25 0.000 Intergenic GSAT|Satellite|centr 339701 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr2-11534 chr2 240246162 240246372 + 8.25 0.000 Intergenic Intergenic -105609 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr6-6212 chr6 16171711 16171921 + 8.25 0.000 Intergenic Intergenic 30260 NR_039782 100616269 NR_039782 ENSG00000263712 MIR4639 - microRNA 4639 ncRNA chr7-2999 chr7 39110188 39110398 + 8.25 0.000 intron (NM_001370959, intron 2 of 9) MER63C|DNA|hAT-Blackjack -96726 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chrX-2391 chrX 71534310 71534520 + 8.25 0.000 intron (NM_181673, intron 1 of 21) intron (NM_181673, intron 1 of 21) 1311 NM_181672 8473 Hs.405410 NM_003605 ENSG00000147162 OGT HINCUT-1|HRNT1|MRX106|O-GLCNAC|OGT1 O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding chr1-12575 chr1 31243758 31243968 + 8.25 0.000 Intergenic Intergenic -3976 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr14-3157 chr14 69255796 69256006 + 8.25 0.000 Intergenic Intergenic -4257 NM_001168368 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr8-4060 chr8 63818977 63819187 + 8.25 0.000 Intergenic LTR8|LTR|ERV1 49652 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr18-2807 chr18 3860495 3860705 + 8.25 0.000 intron (NM_001242761, intron 4 of 11) intron (NM_001242761, intron 4 of 11) 13702 NM_001308390 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr7-9713 chr7 155858347 155858557 + 8.25 0.000 Intergenic (GTGTGT)n|Simple_repeat|Simple_repeat -45989 NM_000193 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr10-3972 chr10 117735855 117736065 + 8.25 0.000 Intergenic L2a|LINE|L2 -190892 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr2-12522 chr2 65259087 65259297 + 8.25 0.000 intron (NM_001005386, intron 7 of 9) AluJo|SINE|Alu 31497 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr2-4439 chr2 180180889 180181099 + 8.25 0.000 Intergenic Intergenic -173697 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr1-13696 chr1 13951328 13951538 + 8.25 0.000 Intergenic MER94|DNA|hAT-Blackjack 202018 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr14-4690 chr14 57246218 57246428 + 8.25 0.000 intron (NM_006544, intron 3 of 17) intron (NM_006544, intron 3 of 17) 22582 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding chr10-4703 chr10 133529141 133529351 + 8.25 0.000 intron (NM_000773, intron 2 of 8) intron (NM_000773, intron 2 of 8) 1883 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr12-2942 chr12 93192181 93192391 + 8.25 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) 17920 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr15-4630 chr15 62875306 62875516 + 8.25 0.000 Intergenic Intergenic 51454 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr17-4221 chr17 40005060 40005270 + 8.25 0.000 Intergenic MLT2A2|LTR|ERVL -10275 NR_033662 1440 Hs.2233 NM_000759 ENSG00000108342 CSF3 C17orf33|CSF3OS|GCSF colony stimulating factor 3 protein-coding chr3-4222 chr3 134726562 134726772 + 8.25 0.000 Intergenic Intergenic -68593 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr1-9288 chr1 25862426 25862636 + 8.25 0.000 3' UTR (NM_178422, exon 2 of 2) 3' UTR (NM_178422, exon 2 of 2) -3073 NM_001287490 79000 Hs.149305 NM_024037 ENSG00000127423 AUNIP AIBP|C1orf135 aurora kinase A and ninein interacting protein protein-coding chr1-12019 chr1 100631476 100631686 + 8.25 0.000 intron (NR_038914, intron 3 of 4) intron (NR_038914, intron 3 of 4) 15423 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr11-9394 chr11 57128605 57128815 + 8.25 0.000 Intergenic Intergenic -53243 NM_001005210 219527 Hs.199853 NM_001005210 ENSG00000183908 LRRC55 - leucine rich repeat containing 55 protein-coding chr15-1597 chr15 77732660 77732870 + 8.25 0.000 intron (NM_001301192, intron 2 of 4) intron (NM_001301192, intron 2 of 4) -12014 NM_001301197 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr9-5356 chr9 90109851 90110061 + 8.25 0.000 Intergenic LTR16C|LTR|ERVL -68457 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr17-7630 chr17 28470784 28470994 + 8.25 0.000 Intergenic Intergenic -2755 NM_001145975 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr17-3614 chr17 1463950 1464160 + 8.25 0.000 TTS (NM_001363855) TTS (NM_001363855) -7823 NM_005206 1398 Hs.461896 NM_005206 ENSG00000167193 CRK CRKII|p38 CRK proto-oncogene, adaptor protein protein-coding chr8-7477 chr8 142462801 142463011 + 8.25 0.000 intron (NM_001702, intron 1 of 30) MIR3|SINE|MIR 13257 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr12-7028 chr12 34214070 34214280 + 8.25 0.000 Intergenic Intergenic 191679 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr1-9649 chr1 47490050 47490260 + 8.25 0.000 Intergenic L2c|LINE|L2 -52838 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr18-2387 chr18 77691471 77691681 + 8.25 0.000 Intergenic Intergenic 302151 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr2-14762 chr2 240253733 240253943 + 8.25 0.000 Intergenic Intergenic -113180 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chrX-2612 chrX 107467413 107467623 + 8.25 0.000 Intergenic L1MCa|LINE|L1 -54932 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr14-2617 chr14 60594436 60594646 + 8.25 0.000 Intergenic Intergenic -44675 NR_126480 104548971 NR_126480 SALRNA1 SAL-RNA1|XLOC_023166 senescence associated long non-coding RNA 1 ncRNA chr7-1069 chr7 43113163 43113373 + 8.25 0.000 intron (NM_001287059, intron 1 of 27) CpG 621 NM_001287059 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chrX-3483 chrX 37528585 37528795 + 8.25 0.000 Intergenic L1P3|LINE|L1 -42971 NM_198511 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chr13-2250 chr13 26202567 26202777 + 8.25 0.000 intron (NM_183045, intron 5 of 5) intron (NM_183045, intron 5 of 5) 19085 NM_183044 6049 Hs.136885 NM_005977 ENSG00000127870 RNF6 - ring finger protein 6 protein-coding chr13-3057 chr13 33611607 33611817 + 8.25 0.000 intron (NM_001243476, intron 3 of 17) intron (NM_001243476, intron 3 of 17) 65082 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr12-4751 chr12 52286723 52286933 + 8.25 0.000 intron (NM_002281, intron 7 of 8) intron (NM_002281, intron 7 of 8) 4706 NM_002281 3887 Hs.658118 NM_002281 ENSG00000205426 KRT81 HB1|Hb-1|KRTHB1|MLN137|ghHkb1|hHAKB2-1 keratin 81 protein-coding chr3-8122 chr3 21705788 21705998 + 8.25 0.000 intron (NM_024697, intron 1 of 7) intron (NM_024697, intron 1 of 7) 45317 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr12-4886 chr12 64458792 64459002 + 8.25 0.000 intron (NM_013254, intron 2 of 20) intron (NM_013254, intron 2 of 20) 6777 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr1-9918 chr1 74561750 74561960 + 8.25 0.000 Intergenic Intergenic -15575 NR_121671 101927320 Hs.662589 NR_121670 ENSG00000234497 ERICH3-AS1 - ERICH3 antisense RNA 1 ncRNA chr14-3127 chr14 67588039 67588249 + 8.25 0.000 3' UTR (NM_020715, exon 29 of 29) 3' UTR (NM_020715, exon 29 of 29) 12124 NM_004569 5283 Hs.553497 NM_004569 ENSG00000100564 PIGH GPI-H phosphatidylinositol glycan anchor biosynthesis class H protein-coding chr9-4667 chr9 120935530 120935740 + 8.25 0.000 Intergenic Intergenic -6462 NM_001190945 7185 Hs.531251 NM_005658 ENSG00000056558 TRAF1 EBI6|MGC:10353 TNF receptor associated factor 1 protein-coding chr15-1114 chr15 88740084 88740294 + 8.25 0.000 Intergenic Intergenic -63247 NM_001369268 176 Hs.2159 NM_001135 ENSG00000157766 ACAN AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD aggrecan protein-coding chr4-6329 chr4 90944496 90944706 + 8.25 0.000 intron (NM_001145065, intron 9 of 10) LTR80A|LTR|ERVL 709570 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr9-8143 chr9 102183756 102183966 + 8.25 0.000 Intergenic Intergenic -335776 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA chr4-8047 chr4 120631601 120631811 + 8.25 0.000 Intergenic Intergenic 291160 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr2-6434 chr2 150143094 150143304 + 8.25 0.000 Intergenic Intergenic 113808 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr16-3592 chr16 73387052 73387262 + 8.25 0.000 non-coding (NR_038234, exon 1 of 3) non-coding (NR_038234, exon 1 of 3) 352 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr2-8767 chr2 164318628 164318838 + 8.25 0.000 Intergenic L1MC3|LINE|L1 249762 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr16-2988 chr16 23304391 23304601 + 8.25 0.000 intron (NM_000336, intron 1 of 12) intron (NM_000336, intron 1 of 12) 2194 NM_000336 6338 Hs.414614 NM_000336 ENSG00000168447 SCNN1B BESC1|ENaCb|ENaCbeta|LIDLS1|SCNEB sodium channel epithelial 1 beta subunit protein-coding chr10-5501 chr10 82185653 82185863 + 8.25 0.000 intron (NM_001165973, intron 2 of 10) intron (NM_001165973, intron 2 of 10) 47162 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr7-5382 chr7 32268007 32268217 + 8.25 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 31216 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr11-2467 chr11 61472315 61472525 + 8.25 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR -8700 NM_001170753 220004 Hs.729003 NM_145017 ENSG00000162148 PPP1R32 C11orf66|IIIG9 protein phosphatase 1 regulatory subunit 32 protein-coding chr1-15001 chr1 91872649 91872859 + 8.25 0.000 intron (NM_001195684, intron 2 of 17) intron (NM_001195684, intron 2 of 17) 13397 NR_036634 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr9-5445 chr9 97616438 97616648 + 8.25 0.000 intron (NM_139246, intron 4 of 9) L2c|LINE|L2 16825 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr1-15686 chr1 167567134 167567344 + 8.25 0.000 Intergenic Intergenic -13477 NM_003851 8804 Hs.5710 NM_003851 ENSG00000143162 CREG1 CREG cellular repressor of E1A stimulated genes 1 protein-coding chr3-5895 chr3 38633467 38633677 + 8.25 0.000 intron (NM_198056, intron 1 of 27) intron (NM_198056, intron 1 of 27) 16100 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr7-5810 chr7 82230866 82231076 + 8.25 0.000 intron (NM_000722, intron 3 of 38) L2c|LINE|L2 212806 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr3-7106 chr3 182210973 182211183 + 8.25 0.000 Intergenic LTR33|LTR|ERVL 258714 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr12-7045 chr12 39547120 39547330 + 8.25 0.000 Intergenic L1MB2|LINE|L1 72578 NM_005164 225 Hs.117852 NM_005164 ENSG00000173208 ABCD2 ABC39|ALDL1|ALDR|ALDRP|hALDR ATP binding cassette subfamily D member 2 protein-coding chr14-1847 chr14 66545787 66545997 + 8.25 0.000 intron (NM_001024218, intron 1 of 21) SVA_D|Retroposon|SVA 38485 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr1-11969 chr1 81531678 81531888 + 8.25 0.000 intron (NR_125943, intron 1 of 3) intron (NR_125943, intron 1 of 3) 25919 NR_125943 101927434 Hs.130394 NR_125943 ENSG00000234953 LOC101927434 - uncharacterized LOC101927434 ncRNA chr2-8085 chr2 74745355 74745565 + 8.25 0.000 Intergenic MIRc|SINE|MIR -87195 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr17-5215 chr17 16477957 16478167 + 8.25 0.000 intron (NM_207387, intron 1 of 2) intron (NM_207387, intron 1 of 2) 14131 NM_001113567 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr4-5282 chr4 175470308 175470518 + 8.25 0.000 Intergenic Intergenic 317263 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr8-3701 chr8 18731451 18731661 + 8.25 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 77311 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr8-4186 chr8 81454173 81454383 + 8.25 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -6839 NM_001348381 5375 Hs.571512 NM_002677 ENSG00000147588 PMP2 CMT1G|FABP8|M-FABP|MP2|P2 peripheral myelin protein 2 protein-coding chr11-4089 chr11 31404271 31404481 + 8.25 0.000 intron (NM_181706, intron 2 of 4) LTR39|LTR|ERV1 34516 NM_181706 120526 Hs.187269 NM_181706 ENSG00000170946 DNAJC24 DPH4|JJJ3|ZCSL3 DnaJ heat shock protein family (Hsp40) member C24 protein-coding chr7-6590 chr7 84697716 84697926 + 8.25 0.000 Intergenic LTR37-int|LTR|ERV1 165345 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr1-11513 chr1 155590994 155591204 + 8.25 0.000 Intergenic Intergenic -19071 NM_018116 55154 Hs.656547 NM_018116 ENSG00000125459 MSTO1 LST005|MMYAT|MST misato mitochondrial distribution and morphology regulator 1 protein-coding chr6-5576 chr6 21463014 21463224 + 8.25 0.000 Intergenic AluSc8|SINE|Alu 48773 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr4-4885 chr4 117135679 117135889 + 8.25 0.000 Intergenic L1M1|LINE|L1 -50208 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr7-7337 chr7 48245051 48245261 + 8.25 0.000 intron (NM_152701, intron 11 of 61) intron (NM_152701, intron 11 of 61) 73698 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr10-5252 chr10 67321652 67321862 + 8.25 0.000 intron (NM_001127384, intron 5 of 17) L2|LINE|L2 81653 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr18-2043 chr18 46552528 46552738 + 8.25 0.000 intron (NM_001145472, intron 3 of 23) intron (NM_001145472, intron 3 of 23) 4136 NM_001308013 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr16-3585 chr16 70364753 70364963 + 8.25 0.000 intron (NM_018332, intron 6 of 11) intron (NM_018332, intron 6 of 11) 17955 NM_018332 55308 Hs.656037 NM_018332 ENSG00000168872 DDX19A DDX19-DDX19L|DDX19L DEAD-box helicase 19A protein-coding chr3-5171 chr3 62415419 62415629 + 8.25 0.000 intron (NM_003716, intron 28 of 29) intron (NM_003716, intron 28 of 29) -41974 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr17-5667 chr17 50313393 50313603 + 8.25 0.000 Intergenic L1ME5|LINE|L1 -25643 NR_125805 103752589 Hs.612913 NR_125805 ENSG00000251179 TMEM92-AS1 TCONS_00025237|lncRNA-508851 TMEM92 antisense RNA 1 ncRNA chr1-10876 chr1 205951070 205951280 + 8.25 0.000 intron (NR_110983, intron 2 of 3) intron (NR_110983, intron 2 of 3) -6750 NR_110982 103021295 Hs.741319 NR_110982 LOC103021295 - uncharacterized LOC103021295 ncRNA chrX-4524 chrX 67241256 67241466 + 8.25 0.000 Intergenic L1MA1|LINE|L1 -302660 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr18-1313 chr18 73172877 73173087 + 8.25 0.000 intron (NR_034133, intron 3 of 5) L2a|LINE|L2 91516 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA chrX-3378 chrX 151381462 151381672 + 8.25 0.000 Intergenic AluY|SINE|Alu -15028 NM_001363810 203547 Hs.58633 NM_001017980 ENSG00000160131 VMA21 MEAX|XMEA vacuolar ATPase assembly factor VMA21 protein-coding chr13-2741 chr13 97031838 97032048 + 8.25 0.000 Intergenic Intergenic -37213 NM_001346195 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding chr10-8082 chr10 67842026 67842236 + 8.25 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -3943 NM_021800 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr15-4069 chr15 69691092 69691302 + 8.25 0.000 intron (NR_126437, intron 5 of 5) MER46C|DNA|TcMar-Tigger 98997 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr6-2178 chr6 34069425 34069635 + 8.25 0.000 intron (NM_001282847, intron 2 of 9) intron (NM_001282847, intron 2 of 9) 36437 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr12-5023 chr12 84508096 84508306 + 8.25 0.000 Intergenic MER50-int|LTR|ERV1 404598 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr1-5995 chr1 46256330 46256540 + 8.25 0.000 intron (NM_001142548, intron 4 of 18) intron (NM_001142548, intron 4 of 18) 8672 NM_003579 8438 Hs.642042 NM_003579 ENSG00000085999 RAD54L HR54|RAD54A|hHR54|hRAD54 RAD54 like protein-coding chrX-2109 chrX 25607173 25607383 + 8.25 0.000 Intergenic L1PA16|LINE|L1 -531065 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr8-4866 chr8 48921760 48921970 + 8.25 0.000 promoter-TSS (NM_003068) promoter-TSS (NM_003068) -436 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr11-10308 chr11 108025682 108025892 + 8.25 0.000 intron (NM_003478, intron 1 of 18) L1MEc|LINE|L1 16889 NM_003478 8065 Hs.440320 NM_003478 ENSG00000166266 CUL5 CUL-5|VACM-1|VACM1 cullin 5 protein-coding chr17-8498 chr17 78833159 78833369 + 8.25 0.000 intron (NM_001321291, intron 4 of 20) intron (NM_001321291, intron 4 of 20) 7263 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr21-771 chr21 44259048 44259258 + 8.25 0.000 intron (NM_175867, intron 5 of 11) intron (NM_175867, intron 5 of 11) 2744 NM_013369 29947 Hs.592165 NM_013369 ENSG00000142182 DNMT3L - DNA methyltransferase 3 like protein-coding chr7-9193 chr7 116009268 116009478 + 8.25 0.000 intron (NM_012252, intron 1 of 7) intron (NM_012252, intron 1 of 7) 21390 NM_012252 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr17-8415 chr17 75911373 75911583 + 8.25 0.000 intron (NM_001319193, intron 28 of 28) AluJb|SINE|Alu -6378 NM_032478 64978 Hs.442609 NM_032478 ENSG00000204316 MRPL38 HSPC262|L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding chr15-2083 chr15 63291647 63291857 + 8.25 0.000 intron (NM_031301, intron 4 of 5) MLT1H2|LTR|ERVL-MaLR 14147 NM_031301 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chr22-4261 chr22 48545300 48545510 + 8.25 0.000 intron (NR_038917, intron 3 of 4) L2b|LINE|L2 1982 NR_038917 284933 Hs.159057 NR_038917 ENSG00000281732 LOC284933 - uncharacterized LOC284933 ncRNA chr4-5133 chr4 152592340 152592550 + 8.25 0.000 Intergenic SATR2|Satellite|Satellite 56017 NR_039658 100616193 NR_039658 ENSG00000283792 MIR4453 - microRNA 4453 ncRNA chr12-4897 chr12 65673986 65674196 + 8.25 0.000 Intergenic Intergenic -31719 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr5-9140 chr5 176547414 176547624 + 8.25 0.000 intron (NM_001171976, intron 1 of 31) 7SLRNA|srpRNA|srpRNA -1823 NM_017675 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding chr2-7484 chr2 17317811 17318021 + 8.25 0.000 Intergenic Intergenic 200524 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr9-7246 chr9 4038340 4038550 + 8.25 0.000 intron (NM_001042413, intron 4 of 10) intron (NM_001042413, intron 4 of 10) 113738 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr4-6240 chr4 65268529 65268739 + 8.25 0.000 Intergenic Intergenic -264134 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr6-4566 chr6 42696701 42696911 + 8.25 0.000 3' UTR (NM_000322, exon 3 of 3) 3' UTR (NM_000322, exon 3 of 3) 25791 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr17-5239 chr17 17620069 17620279 + 8.25 0.000 Intergenic L1MCa|LINE|L1 -28466 NM_001267551 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr8-5108 chr8 61490227 61490437 + 8.25 0.000 intron (NM_173519, intron 5 of 5) AluSq|SINE|Alu 199479 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chrX-3814 chrX 143552459 143552669 + 8.25 0.000 Intergenic MSTA|LTR|ERVL-MaLR -35089 NM_001009609 139067 Hs.447320 NM_001009609 ENSG00000189252 SPANXN3 CT11.8|SPANX-N3 SPANX family member N3 protein-coding chr2-6328 chr2 73293699 73293909 + 8.25 0.000 promoter-TSS (NM_001965) promoter-TSS (NM_001965) -256 NM_001965 1961 Hs.3052 NM_001965 ENSG00000135625 EGR4 AT133|NGFI-C|NGFIC|PAT133 early growth response 4 protein-coding chr5-6621 chr5 39805954 39806164 + 8.25 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -246232 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr19-4141 chr19 28632034 28632244 + 8.25 0.000 intron (NR_110759, intron 5 of 9) L1PA15-16|LINE|L1 25451 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr9-8178 chr9 106280177 106280387 + 8.25 0.000 Intergenic L1M3|LINE|L1 -320646 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr4-8029 chr4 118826851 118827061 + 8.25 0.000 intron (NM_014822, intron 2 of 22) L2c|LINE|L2 9170 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr16-6008 chr16 8604065 8604275 + 8.25 0.000 Intergenic L1ME4a|LINE|L1 -13659 NM_001290097 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr6-2714 chr6 48142993 48143203 + 8.25 0.000 Intergenic AluJr|SINE|Alu -74409 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr20-1291 chr20 51306947 51307157 + 8.25 0.000 Intergenic Intergenic 145925 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr9-8193 chr9 107611254 107611464 + 8.25 0.000 Intergenic L2b|LINE|L2 -121590 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr8-3785 chr8 25766352 25766562 + 8.25 0.000 Intergenic FRAM|SINE|Alu 278956 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr2-13160 chr2 119673317 119673527 + 8.25 0.000 Intergenic L2a|LINE|L2 -5745 NM_001105198 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr3-2696 chr3 55481200 55481410 + 8.25 0.000 promoter-TSS (NM_001256105) promoter-TSS (NM_001256105) 93 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr6-7599 chr6 76262609 76262819 + 8.25 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -190036 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr2-13533 chr2 151758115 151758325 + 8.25 0.000 Intergenic Intergenic -23733 NM_001164508 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr21-847 chr21 27105583 27105793 + 8.25 0.000 Intergenic LTR40a|LTR|ERVL -138600 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr3-11156 chr3 189363994 189364204 + 8.25 0.000 Intergenic MLT2B4|LTR|ERVL -123505 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr7-4010 chr7 145093860 145094070 + 8.25 0.000 Intergenic Intergenic -257912 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr2-12686 chr2 75983705 75983915 + 8.25 0.000 Intergenic Intergenic -272895 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr14-3311 chr14 85878579 85878789 + 8.25 0.000 Intergenic Intergenic -55994 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr11-10368 chr11 111582048 111582258 + 8.25 0.000 Intergenic Intergenic -20296 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr22-2902 chr22 46383656 46383866 + 8.25 0.000 intron (NM_014246, intron 20 of 34) AluJb|SINE|Alu 48047 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr9-6825 chr9 37456601 37456811 + 8.25 0.000 intron (NM_014872, intron 1 of 1) L2c|LINE|L2 8744 NM_014872 9925 Hs.161276 NM_014872 ENSG00000168795 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding chr20-3968 chr20 34740439 34740649 + 8.25 0.000 exon (NM_014071, exon 11 of 15) exon (NM_014071, exon 11 of 15) 35825 NM_001329431 58476 Hs.516994 NM_021202 ENSG00000078804 TP53INP2 C20orf110|DOR|PIG-U|PIGU|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding chr9-2067 chr9 36876069 36876279 + 8.25 0.000 intron (NM_001280549, intron 6 of 7) intron (NM_001280549, intron 6 of 7) -11866 NR_039766 100616278 NR_039766 ENSG00000264922 MIR4540 - microRNA 4540 ncRNA chr8-6872 chr8 100590237 100590447 + 8.25 0.000 intron (NM_152628, intron 10 of 13) FLAM_C|SINE|Alu 28063 NM_001363720 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr17-5736 chr17 58315169 58315379 + 8.25 0.000 intron (NM_024418, intron 15 of 30) intron (NM_024418, intron 15 of 30) -10176 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr2-9422 chr2 232424129 232424339 + 8.25 0.000 Intergenic AluSz|SINE|Alu 17390 NM_031313 251 Hs.333509 NM_031313 ENSG00000163286 ALPG ALPPL|ALPPL2|GCAP alkaline phosphatase, germ cell protein-coding chrX-1257 chrX 102765519 102765729 + 8.25 0.000 intron (NR_146584, intron 8 of 18) MamGypLTR1a|LTR|Gypsy -3529 NR_038988 100287765 Hs.556850 NR_038988 LINC00630 - long intergenic non-protein coding RNA 630 ncRNA chr12-6980 chr12 29432859 29433069 + 8.25 0.000 intron (NR_073172, intron 1 of 1) L2a|LINE|L2 43670 NR_073172 101055625 Hs.569158 NR_073170 ENSG00000257599 OVCH1-AS1 - OVCH1 antisense RNA 1 ncRNA chr16-4061 chr16 1565811 1566021 + 8.25 0.000 intron (NM_014714, intron 16 of 30) intron (NM_014714, intron 16 of 30) -14611 NR_135176 105371046 Hs.663325 NR_135176 ENSG00000260989 LOC105371046 - uncharacterized LOC105371046 ncRNA chr8-2661 chr8 80485312 80485522 + 8.25 0.000 promoter-TSS (NM_023929) promoter-TSS (NM_023929) -176 NM_001277145 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr4-7494 chr4 73349751 73349961 + 8.25 0.000 Intergenic Intergenic -54431 NM_000477 213 Hs.418167 NM_000477 ENSG00000163631 ALB HSA|PRO0883|PRO0903|PRO1341 albumin protein-coding chr9-2571 chr9 134868526 134868736 + 8.25 0.000 intron (NR_103451, intron 1 of 1) intron (NR_103451, intron 1 of 1) 3987 NR_103451 101448202 Hs.679677 NR_103451 LOC101448202 - uncharacterized LOC101448202 ncRNA chr6-5811 chr6 15962506 15962716 + 8.25 0.000 Intergenic Intergenic -166475 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr22-2785 chr22 41782800 41783010 + 8.25 0.000 intron (NM_152513, intron 24 of 30) intron (NM_152513, intron 24 of 30) -17717 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr16-6297 chr16 46822394 46822604 + 8.25 0.000 intron (NM_001001436, intron 2 of 3) MER5B|DNA|hAT-Charlie 8549 NR_145837 388272 Hs.406551 NM_001001436 ENSG00000155330 C16orf87 - chromosome 16 open reading frame 87 protein-coding chrX-4174 chrX 32986885 32987095 + 8.25 0.000 intron (NM_000109, intron 2 of 78) intron (NM_000109, intron 2 of 78) 141437 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr6-3981 chr6 109420782 109420992 + 8.25 0.000 intron (NR_104429, intron 5 of 8) intron (NR_104429, intron 5 of 8) -19837 NM_003080 6610 Hs.55235 NM_003080 ENSG00000135587 SMPD2 ISC1|NSMASE|NSMASE1 sphingomyelin phosphodiesterase 2 protein-coding chr1-9950 chr1 78551937 78552147 + 8.25 0.000 Intergenic L1PA15-16|LINE|L1 61068 NM_000959 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr2-7197 chr2 215609277 215609487 + 8.25 0.000 Intergenic Intergenic -108661 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr16-2232 chr16 88948648 88948858 + 8.25 0.000 intron (NM_001290330, intron 1 of 1) MIRc|SINE|MIR -7403 NM_175931 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr1-7079 chr1 185775731 185775941 + 8.25 0.000 intron (NM_031935, intron 1 of 106) intron (NM_031935, intron 1 of 106) 41445 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr8-2267 chr8 88716287 88716497 + 8.25 0.000 Intergenic Intergenic -388909 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr18-2728 chr18 72566586 72566796 + 8.25 0.000 Intergenic L1MA6|LINE|L1 -22349 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr21-967 chr21 45333821 45334031 + 8.25 0.000 Intergenic L2a|LINE|L2 8064 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chrX-1469 chrX 117555194 117555404 + 8.25 0.000 Intergenic L1PA4|LINE|L1 418439 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr15-2402 chr15 63634372 63634582 + 8.25 0.000 intron (NM_003922, intron 66 of 77) intron (NM_003922, intron 66 of 77) -33650 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr2-12518 chr2 65026653 65026863 + 8.25 0.000 Intergenic Intergenic -29658 NR_134966 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr3-8419 chr3 108724265 108724475 + 8.25 0.000 Intergenic MSTA|LTR|ERVL-MaLR 32913 NM_032579 84666 Hs.307047 NM_032579 ENSG00000163515 RETNLB FIZZ1|FIZZ2|HXCP2|RELM-beta|RELMb|RELMbeta|XCP2 resistin like beta protein-coding chr18-2945 chr18 14260361 14260571 + 8.25 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -76957 NR_026756 284233 Hs.607579 NR_026756 ENSG00000265787 CYP4F35P - cytochrome P450 family 4 subfamily F member 35, pseudogene pseudo chr11-4318 chr11 69601004 69601214 + 8.25 0.000 Intergenic Intergenic -39996 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr7-6969 chr7 101641458 101641668 + 8.25 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -12267 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr9-7353 chr9 15439277 15439487 + 8.25 0.000 intron (NR_161450, intron 3 of 7) intron (NR_161450, intron 3 of 7) 16506 NR_161450 6619 Hs.546299 NM_003084 ENSG00000164975 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex polypeptide 3 protein-coding chr11-5161 chr11 3246686 3246896 + 8.25 0.000 Intergenic MER4D1|LTR|ERV1 -14374 NM_001039165 116534 Hs.745512 NM_001039165 ENSG00000184350 MRGPRE GPR167|MGRF|MRGE MAS related GPR family member E protein-coding chr22-2120 chr22 32258647 32258857 + 8.25 0.000 intron (NR_149072, intron 2 of 3) L1MB1|LINE|L1 -3405 NM_014227 6527 Hs.130101 NM_014227 ENSG00000100191 SLC5A4 DJ90G24.4|SAAT1|SGLT3 solute carrier family 5 member 4 protein-coding chrX-1042 chrX 103918433 103918643 + 8.25 0.000 promoter-TSS (NM_001350211) promoter-TSS (NM_001350211) -358 NM_001350211 286527 Hs.675540 NM_194324 ENSG00000158427 TMSB15B TMSB15A|TMSL8|TMSNB|Tbeta15b thymosin beta 15B protein-coding chr5-7711 chr5 58156924 58157134 + 8.25 0.000 Intergenic Intergenic -34688 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr22-1654 chr22 38725030 38725240 + 8.25 0.000 intron (NM_004286, intron 6 of 11) intron (NM_004286, intron 6 of 11) 19191 NM_004286 9567 Hs.276925 NM_004286 ENSG00000100226 GTPBP1 GP-1|GP1|HSPC018 GTP binding protein 1 protein-coding chr9-7834 chr9 83117203 83117413 + 8.25 0.000 Intergenic Intergenic -54166 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr3-5840 chr3 32492785 32492995 + 8.25 0.000 intron (NM_017801, intron 1 of 3) Tigger13a|DNA|TcMar-Tigger 9962 NM_017801 54918 Hs.380627 NM_017801 ENSG00000091317 CMTM6 CKLFSF6|PRO2219 CKLF like MARVEL transmembrane domain containing 6 protein-coding chr3-9698 chr3 65417930 65418140 + 8.25 0.000 intron (NM_001365904, intron 12 of 24) MER20|DNA|hAT-Charlie -475781 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr9-6749 chr9 17319947 17320157 + 8.25 0.000 intron (NM_001365029, intron 8 of 25) intron (NM_001365029, intron 8 of 25) 185012 NM_017738 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr8-4662 chr8 136894650 136894860 + 8.25 0.000 intron (NR_147196, intron 4 of 5) L2b|LINE|L2 363957 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr2-12738 chr2 84165110 84165320 + 8.25 0.000 Intergenic Charlie20a|DNA|hAT-Charlie -125467 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chrX-2217 chrX 42045091 42045301 + 8.25 0.000 Intergenic Intergenic -121642 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr12-6238 chr12 32660754 32660964 + 8.25 0.000 Intergenic Intergenic -18341 NM_001278465 10059 Hs.556296 NM_005690 ENSG00000087470 DNM1L DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5 dynamin 1 like protein-coding chr14-3115 chr14 66105840 66106050 + 8.25 0.000 Intergenic Intergenic -380426 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chrX-5194 chrX 134240059 134240269 + 8.25 0.000 intron (NM_001353453, intron 2 of 2) intron (NM_001353453, intron 2 of 2) 2951 NM_001353453 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr11-7775 chr11 87468279 87468489 + 8.25 0.000 Intergenic Intergenic 251027 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr10-9132 chr10 127827464 127827674 + 8.25 0.000 Intergenic Intergenic 65372 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chr3-6597 chr3 125431500 125431710 + 8.25 0.000 Intergenic Intergenic -56251 NM_001348428 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr13-3125 chr13 78216190 78216400 + 8.25 0.000 intron (NR_047001, intron 2 of 5) intron (NR_047001, intron 2 of 5) 161440 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr3-3668 chr3 141366848 141367058 + 8.25 0.000 intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) -19472 NM_001350099 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr11-5997 chr11 21167397 21167607 + 8.25 0.000 intron (NM_201551, intron 13 of 18) intron (NM_201551, intron 13 of 18) 497916 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr19-2014 chr19 47212452 47212662 + 8.25 0.000 Intergenic Intergenic -14385 NR_036158 100422899 NR_036158 ENSG00000265134 MIR3190 mir-3190 microRNA 3190 ncRNA chr19-4667 chr19 16943906 16944116 + 8.25 0.000 intron (NM_015692, intron 22 of 41) intron (NM_015692, intron 22 of 41) -47064 NR_147452 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr9-2700 chr9 85404960 85405170 + 8.25 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 336964 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr11-10525 chr11 119776028 119776238 + 8.25 0.000 Intergenic Intergenic 46550 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chrX-2501 chrX 93874445 93874655 + 8.25 0.000 Intergenic LTR25-int|LTR|ERV1 200344 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr19-3909 chr19 42594060 42594270 + 8.25 0.000 intron (NM_001816, intron 1 of 5) L2a|LINE|L2 759 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chrX-3726 chrX 119078523 119078733 + 8.25 0.000 TTS (NM_020721) TTS (NM_020721) 71951 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr12-3854 chr12 105201825 105202035 + 8.25 0.000 intron (NM_001251904, intron 9 of 20) intron (NM_001251904, intron 9 of 20) 31475 NM_001251905 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr16-4404 chr16 50597293 50597503 + 8.25 0.000 intron (NM_033119, intron 3 of 9) intron (NM_033119, intron 3 of 9) 49002 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr9-7913 chr9 89079457 89079667 + 8.25 0.000 intron (NM_016848, intron 2 of 11) intron (NM_016848, intron 2 of 11) 88094 NM_005226 1903 Hs.585118 NM_005226 ENSG00000213694 S1PR3 EDG-3|EDG3|LPB3|S1P3 sphingosine-1-phosphate receptor 3 protein-coding chr2-13205 chr2 122011540 122011750 + 8.25 0.000 Intergenic Intergenic 255994 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr12-4557 chr12 27777206 27777416 + 8.25 0.000 Intergenic Intergenic -2922 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr12-2722 chr12 132787161 132787371 + 8.25 0.000 intron (NM_001172557, intron 13 of 15) intron (NM_001172557, intron 13 of 15) -25434 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr3-2805 chr3 9173025 9173235 + 8.25 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -19363 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr1-9993 chr1 83996575 83996785 + 8.25 0.000 intron (NM_001350214, intron 1 of 21) intron (NM_001350214, intron 1 of 21) 2452 NM_024686 79739 Hs.445826 NM_024686 ENSG00000137941 TTLL7 - tubulin tyrosine ligase like 7 protein-coding chr1-14010 chr1 26294150 26294360 + 8.25 0.000 exon (NM_145345, exon 8 of 15) exon (NM_145345, exon 8 of 15) 12449 NM_001077262 91544 Hs.145061 NM_145345 ENSG00000158062 UBXN11 COA-1|PP2243|SOC|SOCI|UBXD5 UBX domain protein 11 protein-coding chr1-13661 chr1 11209395 11209605 + 8.25 0.000 intron (NM_004958, intron 24 of 57) intron (NM_004958, intron 24 of 57) 20145 NM_021146 10218 Hs.146559 NM_021146 ENSG00000171819 ANGPTL7 AngX|CDT6|dJ647M16.1 angiopoietin like 7 protein-coding chr5-4549 chr5 18311501 18311711 + 8.25 0.000 Intergenic Intergenic 504332 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr5-3859 chr5 133672724 133672934 + 8.25 0.000 Intergenic MER4A1|LTR|ERV1 -60288 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr2-3546 chr2 15577284 15577494 + 8.25 0.000 Intergenic MER5A1|DNA|hAT-Charlie -14479 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr3-6941 chr3 160126233 160126443 + 8.25 0.000 intron (NR_108088, intron 3 of 9) MER39|LTR|ERV1 80754 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr10-8065 chr10 65934275 65934485 + 8.25 0.000 intron (NM_001127384, intron 17 of 17) intron (NM_001127384, intron 17 of 17) 362955 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr8-7499 chr8 142889029 142889239 + 8.25 0.000 Intergenic THE1C|LTR|ERVL-MaLR -9314 NM_000497 1584 Hs.184927 NM_000497 ENSG00000160882 CYP11B1 CPN1|CYP11B|FHI|P450C11 cytochrome P450 family 11 subfamily B member 1 protein-coding chr1-6875 chr1 115300711 115300921 + 8.25 0.000 intron (NM_002506, intron 1 of 2) intron (NM_002506, intron 1 of 2) 17782 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr3-7115 chr3 183306729 183306939 + 8.25 0.000 intron (NM_015078, intron 10 of 29) intron (NM_015078, intron 10 of 29) 53581 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr2-11425 chr2 221707884 221708094 + 8.25 0.000 Intergenic Intergenic -133787 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr14-3152 chr14 69025498 69025708 + 8.25 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 45921 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr3-8998 chr3 18036306 18036516 + 8.25 0.000 intron (NR_161333, intron 3 of 4) intron (NR_161333, intron 3 of 4) 73859 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr11-6953 chr11 113113735 113113945 + 8.25 0.000 intron (NM_181351, intron 1 of 18) intron (NM_181351, intron 1 of 18) -150380 NR_120563 101928847 Hs.711235 NR_120563 ENSG00000247416 LOC101928847 - uncharacterized LOC101928847 ncRNA chr5-4181 chr5 108769415 108769625 + 8.25 0.000 intron (NM_005246, intron 2 of 19) L2a|LINE|L2 20572 NR_146155 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chrX-3149 chrX 20092372 20092582 + 8.25 0.000 intron (NM_152780, intron 1 of 15) LTR29|LTR|ERV1 24163 NM_001168467 256714 Hs.127951 NM_152780 ENSG00000184368 MAP7D2 - MAP7 domain containing 2 protein-coding chr3-7124 chr3 183895254 183895464 + 8.25 0.000 Intergenic Intergenic 8559 NR_039650 100616127 NR_039650 ENSG00000263932 MIR4448 - microRNA 4448 ncRNA chr8-7084 chr8 117833698 117833908 + 8.25 0.000 intron (NM_000127, intron 3 of 10) intron (NM_000127, intron 3 of 10) 87110 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr15-3151 chr15 67368300 67368510 + 8.25 0.000 intron (NM_001031715, intron 8 of 20) intron (NM_001031715, intron 8 of 20) -113207 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding chr11-7449 chr11 122071090 122071300 + 8.25 0.000 intron (NR_137178, intron 1 of 4) MIRb|SINE|MIR 28649 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr4-7512 chr4 74755657 74755867 + 8.25 0.000 intron (NM_001729, intron 3 of 5) intron (NM_001729, intron 3 of 5) 38761 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr11-4877 chr11 41192186 41192396 + 8.25 0.000 intron (NM_001258419, intron 1 of 6) L2a|LINE|L2 267345 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr20-1973 chr20 38329437 38329647 + 8.25 0.000 intron (NM_001725, intron 11 of 14) intron (NM_001725, intron 11 of 14) -16940 NM_004139 3929 Hs.154078 NM_004139 ENSG00000129988 LBP BPIFD2 lipopolysaccharide binding protein protein-coding chr1-7752 chr1 34472371 34472581 + 8.25 0.000 Intergenic Intergenic 197218 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr2-12598 chr2 70920040 70920250 + 8.25 0.000 intron (NM_012476, intron 1 of 2) Charlie20a|DNA|hAT-Charlie -15755 NM_001692 525 Hs.64173 NM_001692 ENSG00000116039 ATP6V1B1 ATP6B1|RTA1B|VATB|VMA2|VPP3 ATPase H+ transporting V1 subunit B1 protein-coding chr12-7318 chr12 54302281 54302491 + 8.25 0.000 Intergenic MamRep38|DNA|hAT -1349 NM_001261461 4778 Hs.75643 NM_006163 ENSG00000123405 NFE2 NF-E2|p45 nuclear factor, erythroid 2 protein-coding chr2-5054 chr2 1626375 1626585 + 8.25 0.000 Intergenic Intergenic 118035 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr3-6068 chr3 51657603 51657813 + 8.25 0.000 intron (NM_001322253, intron 22 of 23) intron (NM_001322253, intron 22 of 23) -13467 NR_024012 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr7-7174 chr7 6351480 6351690 + 8.25 0.000 Intergenic Intergenic -2618 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chr7-8909 chr7 93979789 93979999 + 8.25 0.000 intron (NR_133909, intron 3 of 4) L1M3d|LINE|L1 24461 NM_001317739 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding KI270754.1-2 KI270754.1 36344 36554 + 8.25 0.000 NA NA NA NA chr1-16330 chr1 217764292 217764502 + 8.25 0.000 intron (NM_138796, intron 6 of 10) L1MC1|LINE|L1 20723 NR_125784 103752555 Hs.602803 NR_125784 ENSG00000234070 SPATA17-AS1 - SPATA17 antisense RNA 1 ncRNA chr17-1795 chr17 80024329 80024539 + 8.25 0.000 intron (NM_019020, intron 1 of 11) (CA)n|Simple_repeat|Simple_repeat 11438 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr6-6280 chr6 36487958 36488168 + 8.25 0.000 non-coding (NR_104481, exon 4 of 4) non-coding (NR_104481, exon 4 of 4) 45063 NM_001286579 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr8-5165 chr8 92855179 92855389 + 8.25 0.000 Intergenic L3|LINE|CR1 -69224 NR_046114 441369 Hs.521683 NR_046114 ENSG00000248858 FLJ46284 - uncharacterized LOC441369 ncRNA chr4-4739 chr4 94369348 94369558 + 8.25 0.000 Intergenic Intergenic -26617 NM_014485 27306 Hs.128433 NM_014485 ENSG00000163106 HPGDS GSTS|GSTS1|GSTS1-1|PGD2|PGDS hematopoietic prostaglandin D synthase protein-coding chr18-610 chr18 634778 634988 + 8.25 0.000 intron (NM_199167, intron 6 of 8) intron (NM_199167, intron 6 of 8) 18183 NM_199167 27098 Hs.732341 NM_014410 ENSG00000079101 CLUL1 RA337M clusterin like 1 protein-coding chr1-11027 chr1 222241074 222241284 + 8.25 0.000 Intergenic LTR22B|LTR|ERVK -262659 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr5-5397 chr5 135137367 135137577 + 8.25 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -97425 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr17-6814 chr17 9022922 9023132 + 8.25 0.000 exon (NM_004822, exon 2 of 7) exon (NM_004822, exon 2 of 7) 1517 NM_004822 9423 Hs.660885 NM_004822 ENSG00000065320 NTN1 MRMV4|NTN1L netrin 1 protein-coding chr16-2157 chr16 56764934 56765144 + 8.25 0.000 intron (NM_014669, intron 3 of 21) intron (NM_014669, intron 3 of 21) -16790 NM_001242795 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr10-9109 chr10 126800150 126800360 + 8.25 0.000 Intergenic Intergenic -105154 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr2-5623 chr2 188659747 188659957 + 8.25 0.000 Intergenic Intergenic 130271 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr1-12850 chr1 98031142 98031352 + 8.25 0.000 intron (NR_046105, intron 3 of 4) intron (NR_046105, intron 3 of 4) 14104 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr10-7178 chr10 105816834 105817044 + 8.25 0.000 intron (NR_120625, intron 3 of 3) intron (NR_120625, intron 3 of 3) 3394 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr3-8830 chr3 8658556 8658766 + 8.25 0.000 Intergenic Intergenic -6577 NM_001256749 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr2-13703 chr2 166116108 166116318 + 8.25 0.000 intron (NR_110260, intron 2 of 11) intron (NR_110260, intron 2 of 11) 11807 NR_148667 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr1-4100 chr1 230270426 230270636 + 8.25 0.000 intron (NM_004481, intron 14 of 15) MER3|DNA|hAT-Charlie 155801 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr17-1687 chr17 10198325 10198535 + 8.25 0.000 5' UTR (NM_201433, exon 1 of 14) 5' UTR (NM_201433, exon 1 of 14) 176 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr11-9145 chr11 34126479 34126689 + 8.25 0.000 intron (NM_001144030, intron 9 of 26) L1ME3Cz|LINE|L1 20955 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr10-6729 chr10 127277469 127277679 + 8.25 0.000 intron (NM_001290223, intron 29 of 51) AluSx1|SINE|Alu -80983 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr16-2814 chr16 67749409 67749619 + 8.25 0.000 intron (NM_001320238, intron 2 of 12) intron (NM_001320238, intron 2 of 12) -30198 NM_001243650 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr11-9523 chr11 64051447 64051657 + 8.25 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -52338 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chrX-3613 chrX 85162189 85162399 + 8.25 0.000 intron (NM_001367858, intron 2 of 11) L1PA13|LINE|L1 -48412 NR_110651 101928128 Hs.636014 NR_110651 LOC101928128 - uncharacterized LOC101928128 ncRNA chr13-4403 chr13 109910168 109910378 + 8.25 0.000 Intergenic Intergenic -123690 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr1-8359 chr1 60825719 60825929 + 8.25 0.000 promoter-TSS (NR_110628) promoter-TSS (NR_110628) -240 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr10-5064 chr10 43287921 43288131 + 8.25 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -20961 NM_145313 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chrX-1769 chrX 67941250 67941460 + 8.25 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 396732 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr3-2762 chr3 150449288 150449498 + 8.25 0.000 intron (NR_130136, intron 3 of 4) L1MC4a|LINE|L1 41095 NM_001303264 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr6-4547 chr6 40852957 40853167 + 8.25 0.000 Intergenic Intergenic 170218 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr3-7226 chr3 194386005 194386215 + 8.25 0.000 Intergenic Intergenic 13156 NM_004488 2814 Hs.73734 NM_004488 ENSG00000178732 GP5 CD42d|GPV glycoprotein V platelet protein-coding chr1-7783 chr1 44039191 44039401 + 8.25 0.000 Intergenic AluJo|SINE|Alu -7834 NM_001024845 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr9-7475 chr9 28389961 28390171 + 8.25 0.000 intron (NM_152570, intron 3 of 6) MIRb|SINE|MIR 329239 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr17-4854 chr17 62619264 62619474 + 8.25 0.000 Intergenic Intergenic -8301 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr2-13899 chr2 181188881 181189091 + 8.25 0.000 intron (NR_130784, intron 1 of 4) intron (NR_130784, intron 1 of 4) 65149 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA chrX-4764 chrX 95488338 95488548 + 8.25 0.000 Intergenic LTR16|LTR|ERVL -425217 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr10-3672 chr10 102267839 102268049 + 8.25 0.000 intron (NM_001199378, intron 3 of 39) intron (NM_001199378, intron 3 of 39) 22412 NM_001199379 8729 Hs.290243 NM_004193 ENSG00000107862 GBF1 ARF1GEF golgi brefeldin A resistant guanine nucleotide exchange factor 1 protein-coding chrX-2818 chrX 135423381 135423591 + 8.25 0.000 intron (NM_203306, intron 1 of 1) intron (NM_203306, intron 1 of 1) 1542 NM_203306 399668 Hs.374414 NM_203306 ENSG00000178947 SMIM10L2A LED|LINC00086|LINC00087|LINC0086|NCRNA00086|NCRNA00087|SMIM10L2B small integral membrane protein 10 like 2A protein-coding chr14-1817 chr14 43503912 43504122 + 8.25 0.000 Intergenic Intergenic 1003266 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr1-11270 chr1 4636148 4636358 + 8.25 0.000 Intergenic Intergenic -18356 NM_001042478 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr2-9310 chr2 223798245 223798455 + 8.25 0.000 intron (NR_110905, intron 1 of 5) intron (NR_110905, intron 1 of 5) 39232 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr7-3488 chr7 2619280 2619490 + 8.25 0.000 Intergenic Kanga2_a|DNA|TcMar-Tc2 -12601 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr19-4842 chr19 37998372 37998582 + 8.25 0.000 intron (NM_015073, intron 1 of 21) L1MC5a|LINE|L1 91269 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr4-8339 chr4 146736259 146736469 + 8.25 0.000 intron (NR_133922, intron 12 of 13) MER4B-int|LTR|ERV1 97471 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr14-1680 chr14 75968554 75968764 + 8.25 0.000 intron (NM_001329938, intron 3 of 4) intron (NM_001329938, intron 3 of 4) 13336 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr22-3024 chr22 26392388 26392598 + 8.25 0.000 Intergenic Intergenic -36767 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr4-4612 chr4 77704098 77704308 + 8.25 0.000 Intergenic Intergenic 114861 NM_001365007 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr1-5253 chr1 202946608 202946818 + 8.25 0.000 intron (NM_001290553, intron 3 of 7) intron (NM_001290553, intron 3 of 7) 11271 NM_001290553 51094 Hs.5298 NM_015999 ENSG00000159346 ADIPOR1 ACDCR1|CGI-45|CGI45|PAQR1|TESBP1A adiponectin receptor 1 protein-coding chr21-271 chr21 29298856 29299066 + 8.25 0.000 promoter-TSS (NM_001186) promoter-TSS (NM_001186) 39 NM_001186 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding chr11-7308 chr11 48417723 48417933 + 8.25 0.000 Intergenic Intergenic -51340 NM_001348223 79346 NM_001348223 ENSG00000176540 OR4C5 OR4C5P|OR4C5Q olfactory receptor family 4 subfamily C member 5 (gene/pseudogene) protein-coding chr2-7953 chr2 62332448 62332658 + 8.25 0.000 Intergenic Intergenic 117032 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr17-5973 chr17 77186006 77186216 + 8.25 0.000 intron (NM_001144001, intron 1 of 14) intron (NM_001144001, intron 1 of 14) 898 NM_001144001 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr21-1100 chr21 34506269 34506479 + 8.25 0.000 intron (NM_000219, intron 2 of 3) intron (NM_000219, intron 2 of 3) 4941 NM_001270403 3753 Hs.121495 NM_000219 ENSG00000180509 KCNE1 ISK|JLNS|JLNS2|LQT2/5|LQT5|MinK potassium voltage-gated channel subfamily E regulatory subunit 1 protein-coding chr6-7620 chr6 78088897 78089107 + 8.25 0.000 Intergenic Intergenic 435963 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr11-3167 chr11 61916602 61916812 + 8.25 0.000 intron (NM_001271686, intron 1 of 8) intron (NM_001271686, intron 1 of 8) 859 NM_013401 5866 Hs.13759 NM_013401 ENSG00000167994 RAB3IL1 GRAB RAB3A interacting protein like 1 protein-coding chr13-3438 chr13 103533757 103533967 + 8.25 0.000 Intergenic LTR16A1|LTR|ERVL 108662 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr1-15788 chr1 175880626 175880836 + 8.25 0.000 TTS (NR_125964) TTS (NR_125964) 3388 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr13-1995 chr13 30415584 30415794 + 8.25 0.000 Intergenic L1PA16|LINE|L1 6555 NR_125771 103724387 NR_125771 ENSG00000225039 LINC01058 - long intergenic non-protein coding RNA 1058 ncRNA chr17-5570 chr17 45036119 45036329 + 8.25 0.000 intron (NM_001288654, intron 1 of 4) MIR3|SINE|MIR 15408 NM_001288655 79877 Hs.463148 NM_024819 ENSG00000172992 DCAKD - dephospho-CoA kinase domain containing protein-coding chr14-3676 chr14 99034493 99034703 + 8.25 0.000 Intergenic L2|LINE|L2 237599 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr22-1532 chr22 22683478 22683688 + 8.25 0.000 Intergenic Intergenic 37271 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr4-4955 chr4 128982062 128982272 + 8.25 0.000 intron (NM_144643, intron 9 of 20) L2a|LINE|L2 111372 NM_001300898 132320 Hs.654690 NM_144643 ENSG00000151466 SCLT1 CAP-1A|CAP1A sodium channel and clathrin linker 1 protein-coding chr3-6448 chr3 105111182 105111392 + 8.25 0.000 Intergenic L1P3|LINE|L1 -255426 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr1-6742 chr1 67052891 67053101 + 8.25 0.000 intron (NM_015139, intron 1 of 11) intron (NM_015139, intron 1 of 11) 1152 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr3-9621 chr3 58199079 58199289 + 8.25 0.000 intron (NM_004944, intron 5 of 7) intron (NM_004944, intron 5 of 7) 11788 NM_004944 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding chr2-9440 chr2 233742103 233742313 + 8.25 0.000 TTS (NM_001001394) TTS (NM_001001394) 1790 NM_001001394 414061 Hs.725533 NM_001001394 DNAJB3 HCG3 DnaJ heat shock protein family (Hsp40) member B3 protein-coding chr6-1672 chr6 3825163 3825373 + 8.25 0.000 Intergenic L2c|LINE|L2 -24105 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr13-3946 chr13 60627514 60627724 + 8.25 0.000 Intergenic Intergenic -45336 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr2-8529 chr2 130959912 130960122 + 8.25 0.000 intron (NM_001367493, intron 4 of 13) intron (NM_001367493, intron 4 of 13) 123103 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr15-3018 chr15 56832296 56832506 + 8.25 0.000 Intergenic Intergenic -85689 NM_001322151 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr3-3028 chr3 114216825 114217035 + 8.25 0.000 Intergenic L2|LINE|L2 -17523 NM_001282563 1814 Hs.121478 NM_000796 ENSG00000151577 DRD3 D3DR|ETM1|FET1 dopamine receptor D3 protein-coding chr2-11055 chr2 113794967 113795177 + 8.25 0.000 Intergenic Intergenic -38430 NM_001330316 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr7-3679 chr7 47686227 47686437 + 8.25 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 31088 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr6-5210 chr6 133067954 133068164 + 8.25 0.000 Intergenic L2a|LINE|L2 -20021 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr10-5342 chr10 71680352 71680562 + 8.25 0.000 intron (NM_022124, intron 16 of 67) intron (NM_022124, intron 16 of 67) 39321 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr6-8132 chr6 129092787 129092997 + 8.25 0.000 intron (NM_000426, intron 3 of 64) intron (NM_000426, intron 3 of 64) 209751 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr6-1549 chr6 89146051 89146261 + 8.25 0.000 exon (NM_001010853, exon 1 of 7) exon (NM_001010853, exon 1 of 7) 101 NM_001010853 135293 Hs.356247 NM_001010853 ENSG00000146281 PM20D2 ACY1L2 peptidase M20 domain containing 2 protein-coding chr12-2884 chr12 32559169 32559379 + 8.25 0.000 intron (NM_001304480, intron 1 of 16) intron (NM_001304480, intron 1 of 16) 24981 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr13-2389 chr13 41866980 41867190 + 8.25 0.000 intron (NM_001009814, intron 10 of 25) intron (NM_001009814, intron 10 of 25) 94000 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr9-5042 chr9 31137302 31137512 + 8.25 0.000 Intergenic Intergenic 244083 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr10-8689 chr10 101343071 101343281 + 8.25 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -10857 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr11-6739 chr11 82601374 82601584 + 8.25 0.000 Intergenic Intergenic 132385 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr5-4679 chr5 38169095 38169305 + 8.25 0.000 intron (NR_147009, intron 2 of 2) L2a|LINE|L2 20720 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA chr8-4565 chr8 127223038 127223248 + 8.25 0.000 Intergenic Intergenic -3875 NR_108049 100507056 Hs.343864 NR_108049 CCAT1 CARLO5|CARLo-5|onco-lncRNA-40 colon cancer associated transcript 1 ncRNA chr8-2636 chr8 68967903 68968113 + 8.25 0.000 intron (NR_039986, intron 2 of 4) intron (NR_039986, intron 2 of 4) 136182 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr3-8157 chr3 32845238 32845448 + 8.25 0.000 intron (NM_001039111, intron 1 of 3) intron (NM_001039111, intron 1 of 3) 27346 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr13-1436 chr13 50799029 50799239 + 8.25 0.000 intron (NM_198989, intron 1 of 1) intron (NM_198989, intron 1 of 1) -8721 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr9-5124 chr9 36132215 36132425 + 8.25 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -4216 NR_104641 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr4-4925 chr4 124330479 124330689 + 8.25 0.000 Intergenic Intergenic 227850 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chrX-2902 chrX 150316921 150317131 + 8.25 0.000 Intergenic MIRb|SINE|MIR -46291 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr8-3114 chr8 49215808 49216018 + 8.25 0.000 Intergenic L1MA4|LINE|L1 143569 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr3-9526 chr3 52320115 52320325 + 8.25 0.000 intron (NM_015512, intron 1 of 77) intron (NM_015512, intron 1 of 77) 3901 NM_015512 25981 Hs.655469 NM_015512 ENSG00000114841 DNAH1 CILD37|DNAHC1|HDHC7|HL-11|HL11|HSRF-1|SPGF18|XLHSRF-1 dynein axonemal heavy chain 1 protein-coding chr20-4359 chr20 56168088 56168298 + 8.25 0.000 Intergenic Intergenic -80539 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr14-5193 chr14 94931047 94931257 + 8.25 0.000 Intergenic Intergenic 160510 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr18-3014 chr18 25687075 25687285 + 8.25 0.000 Intergenic Intergenic -335014 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr16-4144 chr16 4555930 4556140 + 8.25 0.000 promoter-TSS (NM_001145011) promoter-TSS (NM_001145011) -455 NM_001145011 342346 Hs.684212 NM_001145011 ENSG00000205832 C16orf96 - chromosome 16 open reading frame 96 protein-coding chr3-7972 chr3 172222714 172222924 + 8.25 0.000 intron (NM_001135095, intron 3 of 25) MER1B|DNA|hAT-Charlie 182288 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr12-5433 chr12 122849214 122849424 + 8.25 0.000 intron (NM_003959, intron 4 of 31) intron (NM_003959, intron 4 of 31) 13862 NM_001303097 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr19-6149 chr19 4268699 4268909 + 8.25 0.000 3' UTR (NM_018074, exon 8 of 8) 3' UTR (NM_018074, exon 8 of 8) -9797 NM_020209 56961 Hs.7423 NM_020209 ENSG00000105251 SHD - Src homology 2 domain containing transforming protein D protein-coding chr12-7312 chr12 54169195 54169405 + 8.25 0.000 Intergenic L2b|LINE|L2 19657 NM_001351247 23583 Hs.632721 NM_014311 ENSG00000123415 SMUG1 FDG|HMUDG|UNG3 single-strand-selective monofunctional uracil-DNA glycosylase 1 protein-coding chr1-7195 chr1 213651222 213651432 + 8.25 0.000 Intergenic Intergenic -273422 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr5-5374 chr5 133553765 133553975 + 8.25 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) 58671 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr1-7153 chr1 205522756 205522966 + 8.25 0.000 intron (NM_002596, intron 1 of 15) intron (NM_002596, intron 1 of 15) 18192 NM_002596 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr1-13642 chr1 10748147 10748357 + 8.25 0.000 intron (NM_001079843, intron 2 of 20) intron (NM_001079843, intron 2 of 20) 48394 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr5-4447 chr5 4870568 4870778 + 8.25 0.000 Intergenic THE1D|LTR|ERVL-MaLR 97192 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA chr12-3840 chr12 95649322 95649532 + 8.25 0.000 intron (NR_077225, intron 1 of 4) intron (NR_077225, intron 1 of 4) 172 NR_077225 100132594 Hs.676211 NR_077225 ENSG00000257150 PGAM1P5 - phosphoglycerate mutase 1 pseudogene 5 pseudo chrX-3917 chrX 9394172 9394382 + 8.25 0.000 Intergenic Intergenic -69018 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr22-3133 chr22 22046154 22046364 + 8.25 0.000 Intergenic Intergenic -2325 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr12-4422 chr12 8391967 8392177 + 8.25 0.000 Intergenic Intergenic -1320 NR_024420 389634 Hs.434403 NM_001012988 ENSG00000226091 LINC00937 - long intergenic non-protein coding RNA 937 ncRNA chr19-2243 chr19 48511634 48511844 + 8.25 0.000 intron (NM_001080434, intron 1 of 15) intron (NM_001080434, intron 1 of 15) 1450 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr3-7894 chr3 130091724 130091934 + 8.25 0.000 non-coding (NR_146710, exon 2 of 5) non-coding (NR_146710, exon 2 of 5) 2475 NR_146710 105374105 Hs.665070 NR_146710 LINC02014 - long intergenic non-protein coding RNA 2014 ncRNA chr1-9978 chr1 81368684 81368894 + 8.25 0.000 intron (NM_001366003, intron 2 of 27) intron (NM_001366003, intron 2 of 27) 62394 NM_001366008 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chrX-3109 chrX 153773686 153773896 + 8.25 0.000 intron (NM_001163257, intron 20 of 36) intron (NM_001163257, intron 20 of 36) -7210 NM_001170761 26576 Hs.104865 NM_014370 ENSG00000184343 SRPK3 MSSK-1|MSSK1|STK23 SRSF protein kinase 3 protein-coding chr2-6125 chr2 219037759 219037969 + 8.25 0.000 intron (NM_152389, intron 3 of 3) intron (NM_152389, intron 3 of 3) 3652 NM_152389 255101 Hs.147762 NM_152389 ENSG00000181378 CFAP65 CCDC108 cilia and flagella associated protein 65 protein-coding chr13-3545 chr13 24220280 24220490 + 8.25 0.000 intron (NM_153023, intron 1 of 11) intron (NM_153023, intron 1 of 11) 34054 NR_046531 100874231 Hs.577998 NR_046531 ENSG00000227213 SPATA13-AS1 - SPATA13 antisense RNA 1 ncRNA chr20-3826 chr20 24144380 24144590 + 8.25 0.000 Intergenic LTR16C|LTR|ERVL -55282 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr4-7207 chr4 41832500 41832710 + 8.25 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 50006 NR_104143 101927074 Hs.611425 NR_104143 ENSG00000245870 LINC00682 - long intergenic non-protein coding RNA 682 ncRNA chr3-6354 chr3 84414672 84414882 + 8.25 0.000 Intergenic MER57A1|LTR|ERV1 454798 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr20-3539 chr20 1233207 1233417 + 8.25 0.000 intron (NM_001136566, intron 4 of 13) L2a|LINE|L2 7192 NM_001136566 642636 Hs.713451 NM_001136566 ENSG00000244588 RAD21L1 RAD21L|dJ545L17.2 RAD21 cohesin complex component like 1 protein-coding chr1-9070 chr1 15386911 15387121 + 8.25 0.000 intron (NM_052929, intron 30 of 30) AluSx1|SINE|Alu -22872 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr5-6937 chr5 138691702 138691912 + 8.25 0.000 Intergenic THE1D|LTR|ERVL-MaLR 61502 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chrX-1502 chrX 7448111 7448321 + 8.25 0.000 Intergenic MER45B|DNA|hAT-Tip100 195743 NM_001320754 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr1-15566 chr1 159136324 159136534 + 8.25 0.000 Intergenic MIRb|SINE|MIR -35186 NM_001346510 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr12-4011 chr12 29472185 29472395 + 8.25 0.000 intron (NM_001353179, intron 15 of 25) L2a|LINE|L2 27403 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding chrX-1089 chrX 3230048 3230258 + 8.25 0.000 Intergenic Intergenic -41667 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 LINC01546 CXorf28 long intergenic non-protein coding RNA 1546 ncRNA chrX-1351 chrX 139392225 139392435 + 8.25 0.000 Intergenic Intergenic -54489 NR_028597 6719 Hs.730315 NR_028597 SRD5A1P1 SRD5AP1 steroid 5 alpha-reductase 1 pseudogene 1 pseudo chr16-4616 chr16 70096176 70096386 + 8.25 0.000 Intergenic Intergenic -17345 NM_001322118 55066 Hs.744043 NM_017990 ENSG00000090857 PDPR PDP3 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding chr2-8378 chr2 111928563 111928773 + 8.25 0.000 intron (NM_006343, intron 1 of 18) AluSx|SINE|Alu 30061 NM_006343 10461 Hs.306178 NM_006343 ENSG00000153208 MERTK MER|RP38|Tyro12|c-Eyk|c-mer MER proto-oncogene, tyrosine kinase protein-coding chr15-5009 chr15 81144759 81144969 + 8.25 0.000 intron (NM_173528, intron 5 of 6) intron (NM_173528, intron 5 of 6) 10594 NM_001353365 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr15-3956 chr15 42092241 42092451 + 8.25 0.000 intron (NM_178034, intron 1 of 19) intron (NM_178034, intron 1 of 19) 2216 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr12-7366 chr12 56602121 56602331 + 8.25 0.000 intron (NM_001351156, intron 21 of 30) intron (NM_001351156, intron 21 of 30) 28100 NM_001300905 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr6-8074 chr6 124301817 124302027 + 8.25 0.000 intron (NM_001040214, intron 2 of 6) THE1B-int|LTR|ERVL-MaLR 18917 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr8-3801 chr8 28014033 28014243 + 8.25 0.000 Intergenic Intergenic -21465 NM_173833 286133 Hs.591833 NM_173833 ENSG00000168079 SCARA5 NET33|Tesr scavenger receptor class A member 5 protein-coding chr12-5065 chr12 91182764 91182974 + 8.25 0.000 promoter-TSS (NM_001920) promoter-TSS (NM_001920) -52 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr12-3026 chr12 132652221 132652431 + 8.25 0.000 intron (NM_006231, intron 29 of 48) AluJb|SINE|Alu 33550 NM_174872 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr19-2135 chr19 3297447 3297657 + 8.25 0.000 TTS (NM_001172673) TTS (NM_001172673) -62078 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr4-3597 chr4 6353949 6354159 + 8.25 0.000 intron (NM_001206994, intron 6 of 9) intron (NM_001206994, intron 6 of 9) 27814 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr8-3966 chr8 49258200 49258410 + 8.25 0.000 Intergenic MIRb|SINE|MIR 185961 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr1-12590 chr1 33289290 33289500 + 8.25 0.000 intron (NM_001370212, intron 5 of 7) intron (NM_001370212, intron 5 of 7) 19702 NM_001370212 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr11-3658 chr11 117415659 117415869 + 8.25 0.000 Intergenic Intergenic 87910 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr8-4182 chr8 81063124 81063334 + 8.25 0.000 intron (NM_018440, intron 2 of 8) intron (NM_018440, intron 2 of 8) 48839 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr6-6042 chr6 125229411 125229621 + 8.25 0.000 intron (NM_003287, intron 3 of 6) intron (NM_003287, intron 3 of 6) 25805 NM_001318907 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr10-7508 chr10 12988540 12988750 + 8.25 0.000 intron (NM_001282658, intron 6 of 6) L2a|LINE|L2 13068 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr2-13004 chr2 106636488 106636698 + 8.25 0.000 Intergenic LTR82A|LTR|ERVL 149229 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr14-1761 chr14 77269043 77269253 + 8.25 0.000 intron (NM_021257, intron 2 of 3) intron (NM_021257, intron 2 of 3) 2164 NM_021257 58157 Hs.274363 NM_021257 ENSG00000165553 NGB - neuroglobin protein-coding chr17-3591 chr17 82044309 82044519 + 8.25 0.000 Intergenic AluSx|SINE|Alu 6496 NR_159948 113523640 Hs.562696 NR_159947 DCXR-DT - DCXR divergent transcript ncRNA chr9-5488 chr9 101445722 101445932 + 8.25 0.000 Intergenic Intergenic -10053 NM_000035 229 Hs.530274 NM_000035 ENSG00000136872 ALDOB ALDB|ALDO2 aldolase, fructose-bisphosphate B protein-coding chr3-9302 chr3 43210742 43210952 + 8.25 0.000 Intergenic MER53|DNA|hAT -75665 NM_001100594 54861 Hs.476052 NM_017719 ENSG00000163788 SNRK HSNFRK SNF related kinase protein-coding chr2-8550 chr2 133717612 133717822 + 8.25 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -149254 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr5-6039 chr5 171345295 171345505 + 8.25 0.000 Intergenic Intergenic -20718 NR_145720 109616973 NR_145720 ENSG00000206909 SNORA70J - small nucleolar RNA, H/ACA box 70J snoRNA chr10-8595 chr10 96533424 96533634 + 8.25 0.000 intron (NM_020123, intron 9 of 14) intron (NM_020123, intron 9 of 14) -19603 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr6-4035 chr6 129652780 129652990 + 8.25 0.000 intron (NM_033515, intron 1 of 14) intron (NM_033515, intron 1 of 14) 57292 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr15-1389 chr15 35751611 35751821 + 8.25 0.000 intron (NR_038251, intron 2 of 2) intron (NR_038251, intron 2 of 2) -175140 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr9-6119 chr9 9173764 9173974 + 8.25 0.000 intron (NM_002839, intron 10 of 45) intron (NM_002839, intron 10 of 45) 315851 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr16-2841 chr16 84538481 84538691 + 8.25 0.000 Intergenic L1ME3A|LINE|L1 -33927 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr15-3435 chr15 90808266 90808476 + 8.25 0.000 intron (NM_001287246, intron 20 of 22) L2|LINE|L2 -60217 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr14-2206 chr14 101728747 101728957 + 8.25 0.000 Intergenic AluSx1|SINE|Alu -1585 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr19-6703 chr19 35860099 35860309 + 8.25 0.000 intron (NM_032123, intron 5 of 15) MSR1|Satellite|Satellite 3293 NM_199179 84063 Hs.145729 NM_032123 ENSG00000126259 KIRREL2 FILTRIN|NEPH3|NLG1 kirre like nephrin family adhesion molecule 2 protein-coding chr14-2067 chr14 68781034 68781244 + 8.25 0.000 Intergenic Intergenic 12775 NM_004926 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr2-5464 chr2 127681645 127681855 + 8.25 0.000 promoter-TSS (NM_001161404) promoter-TSS (NM_001161404) 36 NM_001161404 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr12-5412 chr12 121810397 121810607 + 8.25 0.000 exon (NM_001353345, exon 5 of 16) exon (NM_001353345, exon 5 of 16) 5778 NM_001353345 23067 Hs.507122 NM_015048 ENSG00000139718 SETD1B KMT2G|Set1B SET domain containing 1B, histone lysine methyltransferase protein-coding chr11-6153 chr11 43513988 43514198 + 8.25 0.000 Intergenic AluSx3|SINE|Alu -45563 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA chr22-1366 chr22 30089166 30089376 + 8.25 0.000 intron (NM_001329457, intron 2 of 11) intron (NM_001329457, intron 2 of 11) 8807 NM_001329457 150280 Hs.120391 NM_152510 ENSG00000176635 HORMAD2 CT46.2 HORMA domain containing 2 protein-coding chr2-5534 chr2 158860244 158860454 + 8.25 0.000 Intergenic Intergenic 65032 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr20-4419 chr20 59880139 59880349 + 8.25 0.000 intron (NM_014258, intron 31 of 44) intron (NM_014258, intron 31 of 44) 53393 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding chr11-8154 chr11 60358274 60358484 + 8.25 0.000 Intergenic MER4B|LTR|ERV1 -20106 NM_206938 58475 Hs.530735 NM_021201 ENSG00000166927 MS4A7 4SPAN2|CD20L4|CFFM4|MS4A8 membrane spanning 4-domains A7 protein-coding chr19-4877 chr19 40278519 40278729 + 8.25 0.000 intron (NM_001626, intron 1 of 13) intron (NM_001626, intron 1 of 13) 4017 NR_030371 693226 NR_030371 ENSG00000207631 MIR641 MIRN641|hsa-mir-641|mir-641 microRNA 641 ncRNA chr10-5331 chr10 71426223 71426433 + 8.25 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 29394 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr20-2756 chr20 51002280 51002490 + 8.25 0.000 Intergenic AluJb|SINE|Alu 20722 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr3-4790 chr3 122422206 122422416 + 8.25 0.000 non-coding (NR_026698, exon 15 of 15) non-coding (NR_026698, exon 15 of 15) 6105 NR_125405 102723582 Hs.675056 NR_125405 ENSG00000272758 LOC102723582 - uncharacterized LOC102723582 ncRNA ML143364.1-7 ML143364.1 116860 117070 + 8.25 0.000 NA NA NA NA chr7-8962 chr7 98855499 98855709 + 8.25 0.000 intron (NM_152913, intron 4 of 7) intron (NM_152913, intron 4 of 7) 14410 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr17-6767 chr17 2017874 2018084 + 8.25 0.000 non-coding (NR_135642, exon 1 of 2) non-coding (NR_135642, exon 1 of 2) 263 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr2-14005 chr2 191046104 191046314 + 8.25 0.000 intron (NM_003151, intron 14 of 23) MER115|DNA|hAT-Tip100 24683 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr5-4871 chr5 65976148 65976358 + 8.25 0.000 intron (NM_001253697, intron 1 of 25) AluSz|SINE|Alu -30680 NR_028474 100303749 Hs.608060 NR_028474 LOC100303749 - LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene pseudo chr14-1256 chr14 18669479 18669689 + 8.25 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -35950 NR_046104 642426 Hs.578301 NR_046104 ENSG00000257504 LINC02297 - long intergenic non-protein coding RNA 2297 ncRNA chr2-9816 chr2 145669678 145669888 + 8.25 0.000 Intergenic Intergenic -917274 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr6-6559 chr6 135458168 135458378 + 8.25 0.000 intron (NM_017651, intron 7 of 27) L1ME3A|LINE|L1 39467 NM_001134831 54806 Hs.386684 NM_017651 ENSG00000135541 AHI1 AHI-1|JBTS3|ORF1|dJ71N10.1 Abelson helper integration site 1 protein-coding chr10-4391 chr10 49626137 49626347 + 8.25 0.000 intron (NM_001142929, intron 6 of 14) intron (NM_001142929, intron 6 of 14) 12205 NM_001142929 1103 Hs.302002 NM_020549 ENSG00000070748 CHAT CHOACTASE|CMS1A|CMS1A2|CMS6 choline O-acetyltransferase protein-coding chr16-3031 chr16 48499112 48499322 + 8.25 0.000 Intergenic Intergenic 110963 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr1-5643 chr1 25198524 25198734 + 8.25 0.000 Intergenic Intergenic 33873 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr10-4806 chr10 8336024 8336234 + 8.25 0.000 Intergenic Intergenic -67824 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chr5-4559 chr5 20685750 20685960 + 8.25 0.000 intron (NR_149120, intron 3 of 11) L1PA13|LINE|L1 -70320 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA chr10-3227 chr10 103302412 103302622 + 8.25 0.000 TTS (NM_032154) TTS (NM_032154) 25379 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr19-2334 chr19 42168194 42168404 + 8.25 0.000 Intergenic Intergenic -34786 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr14-4523 chr14 39772093 39772303 + 8.25 0.000 Intergenic Intergenic -339698 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr5-3762 chr5 59463840 59464050 + 8.25 0.000 intron (NM_001349242, intron 1 of 16) LTR5_Hs|LTR|ERVK -106975 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr19-3869 chr19 19627115 19627325 + 8.25 0.000 exon (NM_004720, exon 2 of 3) exon (NM_004720, exon 2 of 3) 1000 NM_004720 9170 Hs.122575 NM_004720 ENSG00000064547 LPAR2 EDG-4|EDG4|LPA-2|LPA2 lysophosphatidic acid receptor 2 protein-coding chr17-4687 chr17 28382405 28382615 + 8.25 0.000 intron (NM_015077, intron 2 of 8) intron (NM_015077, intron 2 of 8) 10816 NM_015077 23098 Hs.743510 NM_015077 ENSG00000004139 SARM1 MyD88-5|SAMD2|SARM sterile alpha and TIR motif containing 1 protein-coding chr3-8790 chr3 5338152 5338362 + 8.25 0.000 Intergenic Intergenic -88002 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr3-5803 chr3 28317428 28317638 + 8.25 0.000 intron (NR_138585, intron 3 of 3) intron (NR_138585, intron 3 of 3) -31188 NM_001040432 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding chr6-7810 chr6 100019569 100019779 + 8.25 0.000 intron (NR_038384, intron 2 of 2) L1MA3|LINE|L1 -25436 NM_032503 84539 Hs.591342 NM_032503 ENSG00000152034 MCHR2 GPR145|GPRv17|MCH-2R|MCH-R2|MCH2|MCH2R|MCHR-2|SLT melanin concentrating hormone receptor 2 protein-coding chr20-1028 chr20 31874231 31874441 + 8.25 0.000 intron (NR_148013, intron 2 of 16) MLT1D|LTR|ERVL-MaLR -3592 NM_080611 128853 Hs.434108 NM_080611 ENSG00000149599 DUSP15 C20orf57|VHY dual specificity phosphatase 15 protein-coding chr3-10758 chr3 156497360 156497570 + 8.25 0.000 intron (NM_172159, intron 8 of 13) intron (NM_172159, intron 8 of 13) -50529 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr18-2746 chr18 79437301 79437511 + 8.25 0.000 intron (NM_001278672, intron 3 of 8) intron (NM_001278672, intron 3 of 8) 37107 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr8-6379 chr8 54242681 54242891 + 8.25 0.000 Intergenic Intergenic -87900 NR_004385 26766 NR_004385 ENSG00000199212 RNU105C E1-5|E1-6 RNA, U105C small nucleolar snoRNA chr15-4333 chr15 40308806 40309016 + 8.25 0.000 promoter-TSS (NM_001284297) promoter-TSS (NM_001284297) -976 NM_004573 5330 Hs.355888 NM_004573 ENSG00000137841 PLCB2 PLC-beta-2 phospholipase C beta 2 protein-coding chr16-5544 chr16 27920344 27920554 + 8.25 0.000 intron (NM_001109763, intron 2 of 6) intron (NM_001109763, intron 2 of 6) -32292 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr10-7993 chr10 60600045 60600255 + 8.25 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -27194 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr1-10560 chr1 172976458 172976668 + 8.25 0.000 Intergenic Intergenic 74400 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr13-3519 chr13 22210671 22210881 + 8.25 0.000 intron (NR_103810, intron 1 of 1) intron (NR_103810, intron 1 of 1) 491 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA chrX-1965 chrX 9621675 9621885 + 8.25 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 144067 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr22-1880 chr22 43279804 43280014 + 8.25 0.000 intron (NR_134582, intron 1 of 1) intron (NR_134582, intron 1 of 1) 3967 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr17-3311 chr17 63446392 63446602 + 8.25 0.000 promoter-TSS (NM_001915) promoter-TSS (NM_001915) -191 NM_001915 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr6-8560 chr6 163324614 163324824 + 8.25 0.000 promoter-TSS (NR_028390) promoter-TSS (NR_028390) -246 NR_028390 285796 Hs.668693 NR_028390 ENSG00000281692 PACRG-AS1 - PACRG antisense RNA 1 ncRNA chr11-9229 chr11 41211315 41211525 + 8.25 0.000 intron (NM_001258419, intron 1 of 6) L1PA5|LINE|L1 248216 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr2-12725 chr2 81197111 81197321 + 8.25 0.000 Intergenic Intergenic 269730 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr1-14613 chr1 55019595 55019805 + 8.25 0.000 Intergenic Intergenic -19776 NM_174936 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr1-9502 chr1 37682335 37682545 + 8.25 0.000 3' UTR (NM_001350755, exon 5 of 5) 3' UTR (NM_001350755, exon 5 of 5) 8089 NM_001350756 54955 Hs.272673 NM_017850 ENSG00000116922 C1orf109 - chromosome 1 open reading frame 109 protein-coding chr13-3834 chr13 48481824 48482034 + 8.25 0.000 TTS (NM_000321) TTS (NM_000321) -37260 NM_005767 10161 Hs.123464 NM_005767 ENSG00000139679 LPAR6 ARWH1|HYPT8|LAH3|P2RY5|P2Y5 lysophosphatidic acid receptor 6 protein-coding chr1-14162 chr1 32639715 32639925 + 8.25 0.000 intron (NM_001366257, intron 1 of 6) Charlie1a|DNA|hAT-Charlie 10730 NM_001366278 339487 Hs.655921 NM_178547 ENSG00000176261 ZBTB8OS ARCH|ARCH2 zinc finger and BTB domain containing 8 opposite strand protein-coding chr5-7664 chr5 53817015 53817225 + 8.25 0.000 intron (NR_147167, intron 1 of 5) intron (NR_147167, intron 1 of 5) 2562 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr10-3333 chr10 11587947 11588157 + 8.25 0.000 intron (NR_125732, intron 2 of 2) intron (NR_125732, intron 2 of 2) -23249 NR_160647 107984208 Hs.590986 NR_160647 LOC107984208 - uncharacterized LOC107984208 ncRNA chr20-2548 chr20 36112635 36112845 + 8.25 0.000 intron (NM_177996, intron 2 of 19) intron (NM_177996, intron 2 of 19) 20030 NM_001258329 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr16-5043 chr16 60237759 60237969 + 8.25 0.000 Intergenic Intergenic 121929 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr18-1448 chr18 40673654 40673864 + 8.25 0.000 Intergenic L3|LINE|CR1 607473 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr1-9420 chr1 32606390 32606600 + 8.25 0.000 TTS (NM_001291496) TTS (NM_001291496) 44055 NM_001366278 339487 Hs.655921 NM_178547 ENSG00000176261 ZBTB8OS ARCH|ARCH2 zinc finger and BTB domain containing 8 opposite strand protein-coding chr20-1851 chr20 22217773 22217983 + 8.25 0.000 Intergenic Intergenic 64923 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chr16-4268 chr16 24179194 24179404 + 8.25 0.000 intron (NM_002738, intron 12 of 16) MLT1K|LTR|ERVL-MaLR -23817 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr17-2058 chr17 59521570 59521780 + 8.25 0.000 intron (NR_110813, intron 1 of 2) intron (NR_110813, intron 1 of 2) 5182 NR_110813 101927728 Hs.569720 NR_110813 ENSG00000265313 LINC01476 - long intergenic non-protein coding RNA 1476 ncRNA chr18-2257 chr18 72859741 72859951 + 8.25 0.000 intron (NR_148694, intron 3 of 11) intron (NR_148694, intron 3 of 11) 5840 NM_138999 81832 Hs.465407 NM_138966 ENSG00000166342 NETO1 BCTL1|BTCL1 neuropilin and tolloid like 1 protein-coding chr13-3108 chr13 60613156 60613366 + 8.25 0.000 Intergenic Intergenic -59694 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr19-4404 chr19 3515698 3515908 + 8.25 0.000 intron (NM_016263, intron 1 of 13) intron (NM_016263, intron 1 of 13) -7153 NM_001136197 51343 Hs.413133 NM_016263 ENSG00000105325 FZR1 CDC20C|CDH1|FZR|FZR2|HCDH|HCDH1 fizzy and cell division cycle 20 related 1 protein-coding chr16-1540 chr16 66837986 66838196 + 8.25 0.000 Intergenic AluSx|SINE|Alu -6323 NM_005182 766 Hs.37014 NM_005182 ENSG00000168748 CA7 CA-VII|CAVII carbonic anhydrase 7 protein-coding chr4-5415 chr4 7711748 7711958 + 8.25 0.000 intron (NM_020777, intron 14 of 26) intron (NM_020777, intron 14 of 26) -42237 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr9-4811 chr9 136160254 136160464 + 8.25 0.000 Intergenic Intergenic 41315 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr5-4476 chr5 8303843 8304053 + 8.25 0.000 Intergenic MER5A|DNA|hAT-Charlie 153616 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr11-9740 chr11 68717445 68717655 + 8.25 0.000 intron (NM_004923, intron 6 of 9) intron (NM_004923, intron 6 of 9) 33006 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr1-10346 chr1 154104655 154104865 + 8.25 0.000 promoter-TSS (NR_049883) promoter-TSS (NR_049883) -168 NR_049883 100847024 NR_049883 ENSG00000263987 MIR5698 - microRNA 5698 ncRNA chr14-3052 chr14 59897757 59897967 + 8.25 0.000 Intergenic AluJo|SINE|Alu -21851 NR_075071 341883 Hs.666245 NM_198499 ENSG00000131951 LRRC9 - leucine rich repeat containing 9 protein-coding chr20-4456 chr20 62276604 62276814 + 8.25 0.000 intron (NM_001363878, intron 7 of 14) intron (NM_001363878, intron 7 of 14) -26187 NM_001281438 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr11-7278 chr11 33754703 33754913 + 8.25 0.000 intron (NM_012175, intron 5 of 10) intron (NM_012175, intron 5 of 10) -18329 NM_000611 966 Hs.278573 NM_000611 ENSG00000085063 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule (CD59 blood group) protein-coding chr1-13927 chr1 22785000 22785210 + 8.25 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 65588 NR_039832 100616391 NR_039832 ENSG00000265422 MIR4684 - microRNA 4684 ncRNA chr2-7997 chr2 67045339 67045549 + 8.25 0.000 Intergenic Intergenic -41002 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA chr4-2288 chr4 3776546 3776756 + 8.25 0.000 Intergenic Intergenic 10266 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr1-13007 chr1 160712261 160712471 + 8.25 0.000 promoter-TSS (NM_001256030) promoter-TSS (NM_001256030) -515 NM_001256030 962 Hs.243564 NM_001778 ENSG00000117091 CD48 BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48 CD48 molecule protein-coding chr16-2362 chr16 57059302 57059512 + 8.25 0.000 intron (NM_001330552, intron 28 of 47) intron (NM_001330552, intron 28 of 47) -33176 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr1-11221 chr1 245246653 245246863 + 8.25 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) -12241 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr12-3739 chr12 29550857 29551067 + 8.25 0.000 intron (NM_001367875, intron 12 of 19) Alu|SINE|Alu -51269 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding chr4-3279 chr4 133279546 133279756 + 8.25 0.000 Intergenic Intergenic 130357 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr12-4461 chr12 14896892 14897102 + 8.25 0.000 Intergenic Intergenic -11143 NM_001190839 4256 Hs.365706 NM_000900 ENSG00000111341 MGP GIG36|MGLAP|NTI matrix Gla protein protein-coding chr1-8030 chr1 229780914 229781124 + 8.25 0.000 Intergenic Intergenic 104799 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr12-4382 chr12 5424463 5424673 + 8.25 0.000 Intergenic MIR|SINE|MIR -7540 NM_001102654 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr7-4187 chr7 128674865 128675075 + 8.25 0.000 intron (NM_001290255, intron 2 of 5) MamGypLTR1b|LTR|Gypsy 2678 NM_001290255 346653 Hs.445236 NM_001012454 ENSG00000205085 FAM71F2 FAM137B family with sequence similarity 71 member F2 protein-coding chr7-6350 chr7 149723907 149724117 + 8.25 0.000 intron (NM_032534, intron 8 of 16) intron (NM_032534, intron 8 of 16) 9001 NM_032534 84626 Hs.299560 NM_032534 ENSG00000133619 KRBA1 - KRAB-A domain containing 1 protein-coding chr5-2835 chr5 56335528 56335738 + 8.25 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -102303 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr4-8487 chr4 159516927 159517137 + 8.25 0.000 Intergenic Intergenic 249223 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr1-3738 chr1 240126837 240127047 + 8.25 0.000 intron (NM_020066, intron 2 of 17) intron (NM_020066, intron 2 of 17) 35059 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr17-5495 chr17 41831865 41832075 + 8.25 0.000 intron (NR_033465, intron 4 of 7) AluJb|SINE|Alu -3715 NM_001329595 317719 Hs.127510 NM_152467 ENSG00000161594 KLHL10 SPGF11 kelch like family member 10 protein-coding chr16-3541 chr16 46758804 46759014 + 8.25 0.000 intron (NM_001308301, intron 1 of 11) intron (NM_001308301, intron 1 of 11) 4337 NM_001308301 91807 Hs.130465 NM_182493 ENSG00000140795 MYLK3 MLCK|MLCK2|caMLCK myosin light chain kinase 3 protein-coding chr9-5151 chr9 37999751 37999961 + 8.25 0.000 intron (NM_003028, intron 2 of 5) MIR3|SINE|MIR 69371 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr1-15419 chr1 152459754 152459964 + 8.13 0.000 Intergenic MIRb|SINE|MIR -45596 NM_016190 49860 Hs.242057 NM_016190 ENSG00000143536 CRNN C1orf10|DRC1|PDRC1|SEP53 cornulin protein-coding chr6-5436 chr6 157850938 157851148 + 8.13 0.000 intron (NM_016224, intron 1 of 17) AluSz|SINE|Alu 27797 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr6-2732 chr6 74010475 74010685 + 8.13 0.000 Intergenic L1PA4|LINE|L1 -58871 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr1-15541 chr1 157510079 157510289 + 8.13 0.000 Intergenic Intergenic 42331 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr7-8664 chr7 71954228 71954438 + 8.13 0.000 intron (NM_001363460, intron 4 of 5) AluSx|SINE|Alu 383058 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr2-14144 chr2 203461854 203462064 + 8.13 0.000 intron (NM_213589, intron 4 of 13) intron (NM_213589, intron 4 of 13) 73342 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chrX-2542 chrX 99329110 99329320 + 8.13 0.000 Intergenic MER4-int|LTR|ERV1 1081058 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr21-1132 chr21 37968697 37968907 + 8.13 0.000 Intergenic Intergenic -52345 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr3-4969 chr3 13085471 13085681 + 8.13 0.000 Intergenic Intergenic -12147 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr1-12361 chr1 3263376 3263586 + 8.13 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 135506 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr4-8281 chr4 141970462 141970672 + 8.13 0.000 Intergenic L1PA6|LINE|L1 333984 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr13-4056 chr13 75629280 75629490 + 8.13 0.000 intron (NM_005358, intron 2 of 29) L2c|LINE|L2 6609 NR_120412 101927155 Hs.564550 NR_120410 ENSG00000261105 LMO7-AS1 UCHL3-AS1 LMO7 antisense RNA 1 ncRNA chr8-3911 chr8 41441105 41441315 + 8.13 0.000 Intergenic Intergenic 14555 NR_145746 109616980 NR_145746 ENSG00000238936 SNORD65B - small nucleolar RNA, C/D box 65B snoRNA chr4-8070 chr4 122503343 122503553 + 8.13 0.000 Intergenic L4_C_Mam|LINE|RTE-X -46953 NM_000586 3558 Hs.89679 NM_000586 ENSG00000109471 IL2 IL-2|TCGF|lymphokine interleukin 2 protein-coding chr3-4799 chr3 125949160 125949370 + 8.13 0.000 Intergenic Intergenic -12221 NM_001015050 200810 Hs.591299 NM_001015050 ENSG00000189366 ALG1L ALG1L1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like protein-coding chr10-6469 chr10 35413301 35413511 + 8.13 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 76532 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr12-7428 chr12 59820763 59820973 + 8.13 0.000 Intergenic Intergenic 131498 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr2-6033 chr2 109507232 109507442 + 8.13 0.000 Intergenic Intergenic 106330 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr21-608 chr21 27424155 27424365 + 8.13 0.000 Intergenic LTR35A|LTR|ERV1 -298119 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr9-5665 chr9 123191804 123192014 + 8.13 0.000 intron (NR_033234, intron 1 of 18) L2a|LINE|L2 -76432 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chr12-4188 chr12 94495488 94495698 + 8.13 0.000 Intergenic MER41B|LTR|ERV1 -35139 NM_001368038 51134 Hs.279209 NM_016122 ENSG00000173588 CEP83 CCDC41|NPHP18|NY-REN-58 centrosomal protein 83 protein-coding chr3-10928 chr3 173690678 173690888 + 8.13 0.000 intron (NM_001365928, intron 3 of 6) intron (NM_001365928, intron 3 of 6) 106349 NM_001365934 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr8-4543 chr8 124233716 124233926 + 8.13 0.000 intron (NR_125420, intron 1 of 2) intron (NR_125420, intron 1 of 2) 13577 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr9-3093 chr9 34574814 34575024 + 8.13 0.000 intron (NM_001842, intron 1 of 8) intron (NM_001842, intron 1 of 8) 6907 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr2-11328 chr2 200845835 200846045 + 8.13 0.000 Intergenic Intergenic 18621 NM_001162407 1195 Hs.433732 NM_004071 ENSG00000013441 CLK1 CLK|CLK/STY|STY CDC like kinase 1 protein-coding chr3-7189 chr3 189137965 189138175 + 8.13 0.000 Intergenic L2b|LINE|L2 -33901 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr12-4070 chr12 53473454 53473664 + 8.13 0.000 intron (NM_001128912, intron 14 of 14) intron (NM_001128912, intron 14 of 14) 9091 NR_109828 102157401 NR_109828 ENSG00000282977 PCBP2-OT1 TUC.338|TUC338|uc.338 PCBP2 overlapping transcript 1 ncRNA chr11-7530 chr11 11450915 11451125 + 8.13 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) -97770 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr8-6903 chr8 101742747 101742957 + 8.13 0.000 intron (NM_001040625, intron 4 of 6) L1PA10|LINE|L1 48117 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr5-7886 chr5 75061487 75061697 + 8.13 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -9034 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding chr1-5501 chr1 157251302 157251512 + 8.13 0.000 Intergenic MLT2D|LTR|ERVL -112816 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr5-4557 chr5 20647005 20647215 + 8.13 0.000 intron (NR_149120, intron 1 of 11) L1PA8A|LINE|L1 -31575 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA chr17-7639 chr17 29064609 29064819 + 8.13 0.000 Intergenic Intergenic 10895 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr2-8097 chr2 75993732 75993942 + 8.13 0.000 Intergenic L1M2|LINE|L1 -282922 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr20-3062 chr20 6272346 6272556 + 8.13 0.000 Intergenic Intergenic -148907 NM_017671 55612 Hs.472054 NM_017671 ENSG00000101311 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding chr12-3224 chr12 56926311 56926521 + 8.13 0.000 intron (NM_148897, intron 3 of 3) intron (NM_148897, intron 3 of 3) 7992 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chrX-3693 chrX 109575077 109575287 + 8.13 0.000 Intergenic MSTA1-int|LTR|ERVL-MaLR 37977 NM_001242618 55916 Hs.25010 NM_018698 ENSG00000101888 NXT2 P15-2 nuclear transport factor 2 like export factor 2 protein-coding chr4-4305 chr4 28355322 28355532 + 8.13 0.000 Intergenic Intergenic -464155 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr13-3066 chr13 37835708 37835918 + 8.13 0.000 intron (NM_003306, intron 1 of 10) intron (NM_003306, intron 1 of 10) 34612 NM_001135955 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr19-5038 chr19 48799282 48799492 + 8.13 0.000 intron (NM_001164773, intron 4 of 8) intron (NM_001164773, intron 4 of 8) 11642 NM_001164773 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr11-6010 chr11 23491011 23491221 + 8.13 0.000 Intergenic MER4D1|LTR|ERV1 -71926 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr5-2235 chr5 8103845 8104055 + 8.13 0.000 Intergenic AluSg|SINE|Alu 234802 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr12-4608 chr12 39805836 39806046 + 8.13 0.000 intron (NR_135051, intron 18 of 18) intron (NR_135051, intron 18 of 18) 179758 NR_135051 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding chr12-2059 chr12 109477683 109477893 + 8.13 0.000 promoter-TSS (NM_001317399) promoter-TSS (NM_001317399) 154 NM_130466 89910 Hs.374067 NM_130466 ENSG00000151148 UBE3B BPIDS|KOS ubiquitin protein ligase E3B protein-coding chr6-6629 chr6 151414804 151415014 + 8.13 0.000 intron (NM_001271937, intron 9 of 10) L1MD2|LINE|L1 -23350 NM_020861 57621 Hs.520073 NM_020861 ENSG00000181472 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding chr12-7515 chr12 68728995 68729205 + 8.13 0.000 intron (NM_020401, intron 20 of 27) Tigger2b_Pri|DNA|TcMar-Tigger -17076 NR_149144 55508 Hs.506011 NM_018656 ENSG00000175782 SLC35E3 BLOV1 solute carrier family 35 member E3 protein-coding chr1-16366 chr1 220772408 220772618 + 8.13 0.000 intron (NM_001331042, intron 4 of 4) intron (NM_001331042, intron 4 of 4) -14400 NM_022746 64757 Hs.497816 NM_022746 ENSG00000186205 MARC1 MOSC1 mitochondrial amidoxime reducing component 1 protein-coding chr8-4971 chr8 129460351 129460561 + 8.13 0.000 intron (NR_130920, intron 1 of 3) intron (NR_130920, intron 1 of 3) 23686 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA chr1-3784 chr1 8360811 8361021 + 8.13 0.000 exon (NM_012102, exon 19 of 24) exon (NM_012102, exon 19 of 24) 42831 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr10-8636 chr10 98957701 98957911 + 8.13 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) -33238 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr20-1358 chr20 36843289 36843499 + 8.13 0.000 intron (NM_080627, intron 1 of 14) intron (NM_080627, intron 1 of 14) 16479 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr2-5943 chr2 32697682 32697892 + 8.13 0.000 intron (NM_017735, intron 9 of 19) AluSz|SINE|Alu 62532 NR_039922 100616219 NR_039922 ENSG00000265057 MIR4765 - microRNA 4765 ncRNA chr16-6969 chr16 86184624 86184834 + 8.13 0.000 Intergenic L1ME3G|LINE|L1 -11452 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr17-2157 chr17 44820663 44820873 + 8.13 0.000 intron (NM_001080383, intron 1 of 2) intron (NM_001080383, intron 1 of 2) 9519 NM_005497 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr5-6648 chr5 52616748 52616958 + 8.13 0.000 Intergenic L1PA8|LINE|L1 -171063 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr1-7618 chr1 2113783 2113993 + 8.13 0.000 intron (NM_001033582, intron 1 of 14) intron (NM_001033582, intron 1 of 14) 9172 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr1-6256 chr1 234624728 234624938 + 8.13 0.000 Intergenic Intergenic -4478 NR_033927 100302691 Hs.209162 NR_033927 ENSG00000224939 LINC00184 HANC|NCRNA00184 long intergenic non-protein coding RNA 184 ncRNA chr22-1562 chr22 39214917 39215127 + 8.13 0.000 Intergenic ERVL-E-int|LTR|ERVL 25887 NM_033016 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr17-7341 chr17 6223208 6223418 + 8.13 0.000 Intergenic L1MD2|LINE|L1 152699 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr8-6704 chr8 84626218 84626428 + 8.13 0.000 intron (NM_001354308, intron 3 of 9) intron (NM_001354308, intron 3 of 9) -79604 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr4-5781 chr4 77735102 77735312 + 8.13 0.000 intron (NM_001365006, intron 8 of 11) LTR16A|LTR|ERVL 83857 NM_001365007 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr22-1594 chr22 17180500 17180710 + 8.13 0.000 3' UTR (NM_001282228, exon 10 of 10) 3' UTR (NM_001282228, exon 10 of 10) -15318 NM_017829 27440 Hs.26890 NM_017829 ENSG00000069998 HDHD5 CECR5 haloacid dehalogenase like hydrolase domain containing 5 protein-coding chr5-5485 chr5 140342879 140343089 + 8.13 0.000 intron (NM_001945, intron 2 of 5) intron (NM_001945, intron 2 of 5) 3619 NM_001945 1839 Hs.799 NM_001945 ENSG00000113070 HBEGF DTR|DTS|DTSF|HEGFL heparin binding EGF like growth factor protein-coding chr18-1143 chr18 8889518 8889728 + 8.13 0.000 Intergenic Intergenic 172242 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr10-6573 chr10 78689197 78689407 + 8.13 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 378146 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr11-7805 chr11 102307415 102307625 + 8.13 0.000 Intergenic Intergenic -9964 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr2-8250 chr2 99102276 99102486 + 8.13 0.000 intron (NR_146001, intron 9 of 18) intron (NR_146001, intron 9 of 18) 38799 NR_146001 80705 Hs.120267 NM_025244 ENSG00000135951 TSGA10 CEP4L|CT79|SPGF26 testis specific 10 protein-coding chr5-6127 chr5 32078661 32078871 + 8.13 0.000 intron (NM_178140, intron 19 of 24) AluJo|SINE|Alu 95553 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr4-3641 chr4 17220952 17221162 + 8.13 0.000 Intergenic Intergenic -35000 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr1-5462 chr1 65506073 65506283 + 8.13 0.000 intron (NM_001003679, intron 2 of 19) intron (NM_001003679, intron 2 of 19) -19473 NM_001198687 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr14-2037 chr14 63155500 63155710 + 8.13 0.000 Intergenic Intergenic -48838 NM_020663 57381 Hs.656339 NM_020663 ENSG00000126785 RHOJ ARHJ|RASL7B|TC10B|TCL ras homolog family member J protein-coding chr6-3890 chr6 62889597 62889807 + 8.13 0.000 Intergenic Intergenic 430275 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr16-6511 chr16 61264229 61264439 + 8.13 0.000 Intergenic Intergenic -208568 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr8-4198 chr8 83705900 83706110 + 8.13 0.000 Intergenic Intergenic 302247 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr20-3660 chr20 11094835 11095045 + 8.13 0.000 Intergenic Intergenic 68396 NR_146878 728434 Hs.570365 NR_146878 ENSG00000125899 C20orf187 - chromosome 20 open reading frame 187 (putative) ncRNA chr16-4777 chr16 85422514 85422724 + 8.13 0.000 Intergenic Intergenic -116294 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr5-7481 chr5 34386106 34386316 + 8.13 0.000 Intergenic L1P3|LINE|L1 -141487 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr19-6605 chr19 28842269 28842479 + 8.13 0.000 Intergenic AluSc|SINE|Alu -114680 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr5-4156 chr5 95387331 95387541 + 8.13 0.000 Intergenic L1MA5|LINE|L1 -3930 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr1-11017 chr1 220747477 220747687 + 8.13 0.000 promoter-TSS (NM_001331042) promoter-TSS (NM_001331042) -740 NM_001331042 54996 Hs.369042 NM_017898 ENSG00000117791 MARC2 MOSC2 mitochondrial amidoxime reducing component 2 protein-coding chr7-3075 chr7 1388692 1388902 + 8.13 0.000 Intergenic Intergenic 70673 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr6-4147 chr6 169424802 169425012 + 8.13 0.000 Intergenic Intergenic -170793 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr1-14005 chr1 26031689 26031899 + 8.13 0.000 intron (NM_004455, intron 6 of 10) intron (NM_004455, intron 6 of 10) 10019 NM_004455 2134 Hs.150956 NM_004455 ENSG00000158008 EXTL1 EXTL exostosin like glycosyltransferase 1 protein-coding chr2-4082 chr2 131681785 131681995 + 8.13 0.000 promoter-TSS (NM_001354871) promoter-TSS (NM_001354871) -609 NM_001354872 29798 Hs.635289 NM_013310 C2orf27A C2orf27|C2orf27B chromosome 2 open reading frame 27A protein-coding chr1-8332 chr1 53411647 53411857 + 8.13 0.000 Intergenic Intergenic 28268 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr17-3654 chr17 7023597 7023807 + 8.13 0.000 exon (NM_181844, exon 2 of 9) exon (NM_181844, exon 2 of 9) 652 NM_181844 255877 Hs.22575 NM_181844 ENSG00000161940 BCL6B BAZF|ZBTB28|ZNF62 BCL6B transcription repressor protein-coding chr11-3143 chr11 46617871 46618081 + 8.13 0.000 promoter-TSS (NM_173811) promoter-TSS (NM_173811) 700 NM_001346336 9776 Hs.127403 NM_014741 ENSG00000175224 ATG13 KIAA0652|PARATARG8 autophagy related 13 protein-coding chr10-8950 chr10 118146150 118146360 + 8.13 0.000 intron (NR_026940, intron 3 of 3) intron (NR_026940, intron 3 of 3) -99314 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr16-6544 chr16 64184471 64184681 + 8.13 0.000 Intergenic Intergenic 937487 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr4-7816 chr4 99201583 99201793 + 8.13 0.000 TTS (NM_000672) TTS (NM_000672) 17558 NM_000672 130 Hs.586161 NM_000672 ENSG00000172955 ADH6 ADH-5 alcohol dehydrogenase 6 (class V) protein-coding chr7-7980 chr7 14821776 14821986 + 8.13 0.000 intron (NM_001350717, intron 2 of 24) L2a|LINE|L2 19569 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr20-1664 chr20 32727588 32727798 + 8.13 0.000 intron (NM_001099339, intron 3 of 8) intron (NM_001099339, intron 3 of 8) 16315 NM_001099339 149951 Hs.408427 NM_053041 ENSG00000149600 COMMD7 C20orf92|dJ1085F17.3 COMM domain containing 7 protein-coding chr12-6310 chr12 52667688 52667898 + 8.13 0.000 Intergenic Intergenic 12614 NM_006121 3848 Hs.80828 NM_006121 ENSG00000167768 KRT1 CK1|EHK|EHK1|EPPK|K1|KRT1A|NEPPK keratin 1 protein-coding chr14-983 chr14 76901117 76901327 + 8.13 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -58416 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr19-3448 chr19 29378137 29378347 + 8.13 0.000 intron (NR_040029, intron 9 of 9) intron (NR_040029, intron 9 of 9) 147510 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr11-7043 chr11 119652208 119652418 + 8.13 0.000 intron (NM_203285, intron 5 of 7) intron (NM_203285, intron 5 of 7) 76887 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr4-4717 chr4 89414791 89415001 + 8.13 0.000 Intergenic Intergenic -107096 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr7-6115 chr7 121480030 121480240 + 8.13 0.000 Intergenic Intergenic -83767 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr21-1187 chr21 43712585 43712795 + 8.13 0.000 Intergenic LTR35A|LTR|ERV1 -6439 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr17-6220 chr17 13970338 13970548 + 8.13 0.000 Intergenic MER51A|LTR|ERV1 -54055 NR_003261 94158 Hs.633073 NR_003261 CDRT15P1 CDRT15P CMT1A duplicated region transcript 15 pseudogene 1 pseudo chr22-1642 chr22 37057361 37057571 + 8.13 0.000 exon (NM_001282684, exon 4 of 9) exon (NM_001282684, exon 4 of 9) 5730 NM_001282684 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr20-1347 chr20 18751390 18751600 + 8.13 0.000 intron (NM_080820, intron 5 of 5) AluSz6|SINE|Alu 42487 NR_026884 29075 Hs.584899 NM_014162 LINC00652 HSPC072 long intergenic non-protein coding RNA 652 ncRNA chr6-4246 chr6 6995745 6995955 + 8.13 0.000 Intergenic AluJb|SINE|Alu -111893 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr20-3251 chr20 466993 467203 + 8.13 0.000 Intergenic AluY|SINE|Alu -4565 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding chr4-8761 chr4 187158492 187158702 + 8.13 0.000 Intergenic Intergenic -43389 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr14-4915 chr14 73497251 73497461 + 8.13 0.000 intron (NM_001220484, intron 14 of 17) intron (NM_001220484, intron 14 of 17) 6423 NM_024644 79697 Hs.509916 NM_024644 ENSG00000170468 RIOX1 C14orf169|JMJD9|MAPJD|NO66|ROX|URLC2|hsNO66 ribosomal oxygenase 1 protein-coding chr11-5826 chr11 8192543 8192753 + 8.13 0.000 Intergenic Intergenic -23623 NM_001346694 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr7-8082 chr7 25098441 25098651 + 8.13 0.000 Intergenic Intergenic 26815 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr4-6470 chr4 146693509 146693719 + 8.13 0.000 Intergenic L1MB7|LINE|L1 54721 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr17-8312 chr17 71427842 71428052 + 8.13 0.000 Intergenic Intergenic -225768 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr4-6311 chr4 87192867 87193077 + 8.13 0.000 intron (NM_020803, intron 2 of 9) Tigger3b|DNA|TcMar-Tigger 27296 NM_001292003 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr11-7395 chr11 83012201 83012411 + 8.13 0.000 intron (NM_001286060, intron 1 of 4) intron (NM_001286060, intron 1 of 4) 21968 NM_001286059 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr3-9386 chr3 47669040 47669250 + 8.13 0.000 intron (NM_003074, intron 19 of 27) intron (NM_003074, intron 19 of 27) -7451 NR_145791 109623484 NR_145791 SNORD146 - small nucleolar RNA, C/D box 146 snoRNA chr4-5407 chr4 6378166 6378376 + 8.13 0.000 intron (NM_001206994, intron 4 of 9) intron (NM_001206994, intron 4 of 9) 3597 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr1-12380 chr1 6354876 6355086 + 8.13 0.000 intron (NM_007274, intron 1 of 8) intron (NM_007274, intron 1 of 8) 3948 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr8-2199 chr8 141329302 141329512 + 8.13 0.000 Intergenic Intergenic -11142 NR_024441 731779 Hs.586414 NR_024441 ENSG00000253595 LINC01300 - long intergenic non-protein coding RNA 1300 ncRNA chr1-2654 chr1 177926508 177926718 + 8.13 0.000 Intergenic LTR81C|LTR|Gypsy 43309 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr6-7495 chr6 63101921 63102131 + 8.13 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 217951 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr22-2031 chr22 39729824 39730034 + 8.13 0.000 Intergenic Intergenic 159176 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr4-7837 chr4 101515992 101516202 + 8.13 0.000 Intergenic Intergenic 168320 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr7-3047 chr7 123322140 123322350 + 8.13 0.000 Intergenic MER54B|LTR|ERVL -122274 NM_001324400 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr2-8862 chr2 175381275 175381485 + 8.13 0.000 Intergenic Intergenic -199670 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr9-7783 chr9 78366287 78366497 + 8.13 0.000 Intergenic Intergenic 69267 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr4-6687 chr4 3023995 3024205 + 8.13 0.000 intron (NM_001004056, intron 9 of 14) intron (NM_001004056, intron 9 of 14) 50414 NR_045414 100750326 Hs.575112 NR_045414 HTT-AS HTT-AS1|HTTAS HTT antisense RNA ncRNA chr3-10897 chr3 171069497 171069707 + 8.13 0.000 intron (NM_001161563, intron 28 of 31) intron (NM_001161563, intron 28 of 31) 37157 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr13-3426 chr13 100188713 100188923 + 8.13 0.000 intron (NR_148031, intron 6 of 22) L1PB1|LINE|L1 99725 NM_001352606 5095 Hs.80741 NM_000282 ENSG00000175198 PCCA - propionyl-CoA carboxylase subunit alpha protein-coding chr6-6375 chr6 71795842 71796052 + 8.13 0.000 Intergenic Intergenic -90756 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr11-7802 chr11 99571022 99571232 + 8.13 0.000 intron (NM_175566, intron 1 of 21) L2a|LINE|L2 14982 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr17-5824 chr17 65281694 65281904 + 8.13 0.000 Intergenic Intergenic 144429 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr17-7423 chr17 10286325 10286535 + 8.13 0.000 Intergenic Intergenic 86576 NM_003802 8735 Hs.711142 NM_003802 ENSG00000006788 MYH13 MyHC-IIL|MyHC-eo myosin heavy chain 13 protein-coding chr17-6278 chr17 41708296 41708506 + 8.13 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -3930 NM_000805 2520 Hs.2681 NM_000805 ENSG00000184502 GAST GAS gastrin protein-coding chr19-5859 chr19 44839391 44839601 + 8.13 0.000 Intergenic Intergenic -6801 NM_001042724 5819 Hs.655455 NM_002856 ENSG00000130202 NECTIN2 CD112|HVEB|PRR2|PVRL2|PVRR2 nectin cell adhesion molecule 2 protein-coding chr19-4171 chr19 40139107 40139317 + 8.13 0.000 Intergenic AluJr4|SINE|Alu -48269 NM_001142579 284323 Hs.115140 NM_001010880 ENSG00000197782 ZNF780A ZNF780 zinc finger protein 780A protein-coding chr12-3157 chr12 48570873 48571083 + 8.13 0.000 promoter-TSS (NM_002289) promoter-TSS (NM_002289) -932 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr1-5836 chr1 230697229 230697439 + 8.13 0.000 Intergenic Intergenic 16788 NM_000029 183 Hs.19383 NM_000029 ENSG00000135744 AGT ANHU|SERPINA8|hFLT1 angiotensinogen protein-coding chr2-9646 chr2 21637646 21637856 + 8.13 0.000 Intergenic L2a|LINE|L2 72901 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr1-16626 chr1 239414412 239414622 + 8.13 0.000 intron (NM_001347716, intron 1 of 7) intron (NM_001347716, intron 1 of 7) 27949 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr8-2775 chr8 118074256 118074466 + 8.13 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 37458 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr13-3717 chr13 39200500 39200710 + 8.13 0.000 Intergenic LTR101_Mam|LTR|ERVL 162149 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr12-4276 chr12 121440857 121441067 + 8.13 0.000 exon (NM_032590, exon 21 of 23) exon (NM_032590, exon 21 of 23) 3390 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chrX-4881 chrX 106512399 106512609 + 8.13 0.000 Intergenic Intergenic -99426 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr21-1133 chr21 38159510 38159720 + 8.13 0.000 Intergenic Intergenic 38164 NR_026839 84677 Hs.733345 NM_032589 ENSG00000198054 DSCR8 C21orf65|CT25.1a|CT25.1b|MMA-1|MMA-1a|MMA-1b|MMA1|MTAG2 Down syndrome critical region 8 ncRNA chr3-4444 chr3 31466562 31466772 + 8.13 0.000 Intergenic MER21C|LTR|ERVL -66258 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr12-7725 chr12 91729738 91729948 + 8.13 0.000 Intergenic ERVL-int|LTR|ERVL 411870 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr17-5996 chr17 77724222 77724432 + 8.13 0.000 non-coding (NR_104134, exon 2 of 2) non-coding (NR_104134, exon 2 of 2) 4232 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr18-439 chr18 109783 109993 + 8.13 0.000 intron (NR_033770, intron 1 of 4) BSR/Beta|Satellite|Satellite 823 NR_033770 727758 Hs.585843 NR_033770 ENSG00000263006 ROCK1P1 ROCK1P Rho associated coiled-coil containing protein kinase 1 pseudogene 1 pseudo chrX-684 chrX 24298296 24298506 + 8.13 0.000 Intergenic Intergenic 14992 NM_001136233 170067 Hs.716893 NM_001136233 SUPT20HL2 FAM48B1|FAM48B2 SUPT20H like 2 protein-coding chr6-2553 chr6 36840538 36840748 + 8.13 0.000 Intergenic CpG-23559 -1199 NM_020939 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr18-2524 chr18 74894766 74894976 + 8.13 0.000 intron (NM_017757, intron 6 of 7) intron (NM_017757, intron 6 of 7) 263908 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr3-2622 chr3 187946222 187946432 + 8.13 0.000 Intergenic Intergenic 30080 NR_135537 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr2-9384 chr2 230617449 230617659 + 8.13 0.000 Intergenic AluSx|SINE|Alu 82975 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr15-4035 chr15 62503487 62503697 + 8.13 0.000 Intergenic Intergenic 141589 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr5-6513 chr5 1871605 1871815 + 8.13 0.000 Intergenic Intergenic 11215 NM_016358 50805 Hs.196927 NM_016358 ENSG00000113430 IRX4 IRXA3 iroquois homeobox 4 protein-coding chr5-6031 chr5 163569372 163569582 + 8.13 0.000 Intergenic Intergenic 63858 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr5-6596 chr5 31825450 31825660 + 8.13 0.000 intron (NM_178140, intron 2 of 24) intron (NM_178140, intron 2 of 24) 110604 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr5-8980 chr5 162319122 162319332 + 8.13 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 251585 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding chr2-13054 chr2 109399094 109399304 + 8.13 0.000 intron (NM_001099289, intron 4 of 9) MER113|DNA|hAT-Charlie -85574 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr1-11584 chr1 204027398 204027608 + 8.13 0.000 Intergenic Intergenic 13761 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr16-3321 chr16 1486273 1486483 + 8.13 0.000 exon (NM_001328608, exon 3 of 3) exon (NM_001328608, exon 3 of 3) 2089 NM_001013658 390667 Hs.553770 NM_001013658 ENSG00000251692 PTX4 C16orf38 pentraxin 4 protein-coding chr13-4144 chr13 84645149 84645359 + 8.13 0.000 Intergenic Intergenic -138400 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr15-4495 chr15 51168682 51168892 + 8.13 0.000 intron (NR_146310, intron 1 of 2) L1MD3|LINE|L1 -63511 NM_207381 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr7-5254 chr7 18900439 18900649 + 8.13 0.000 intron (NM_058176, intron 21 of 22) intron (NM_058176, intron 21 of 22) 217092 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr13-1958 chr13 107461721 107461931 + 8.13 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 69422 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA chrX-1657 chrX 145190551 145190761 + 8.13 0.000 Intergenic Intergenic -56847 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr17-6675 chr17 76179974 76180184 + 8.13 0.000 intron (NM_052916, intron 2 of 18) intron (NM_052916, intron 2 of 18) -38834 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr2-9934 chr2 240141580 240141790 + 8.13 0.000 Intergenic MER68|LTR|ERVL -1027 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr4-1723 chr4 616907 617117 + 8.13 0.000 Intergenic Intergenic -8562 NM_000283 5158 Hs.623810 NM_000283 ENSG00000133256 PDE6B CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1 phosphodiesterase 6B protein-coding chr13-2315 chr13 32426260 32426470 + 8.13 0.000 intron (NM_001353637, intron 1 of 1) intron (NM_001353637, intron 1 of 1) 1765 NM_001353633 90634 Hs.732118 NM_052818 ENSG00000139597 N4BP2L1 CG018 NEDD4 binding protein 2 like 1 protein-coding chr16-6713 chr16 72054000 72054210 + 8.13 0.000 promoter-TSS (NM_001126102) promoter-TSS (NM_001126102) -400 NM_001318138 3240 Hs.513711 NM_005143 ENSG00000257017 HP BP|HP2ALPHA2|HPA1S haptoglobin protein-coding chr1-8980 chr1 10055936 10056146 + 8.13 0.000 intron (NM_006048, intron 1 of 26) intron (NM_006048, intron 1 of 26) 23083 NM_006048 10277 Hs.593974 NM_006048 ENSG00000130939 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding chr8-6726 chr8 87110125 87110335 + 8.13 0.000 intron (NM_173538, intron 4 of 10) ERV3-16A3_I-int|LTR|ERVL 243815 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chrX-1307 chrX 123547952 123548162 + 8.13 0.000 Intergenic HERVL-int|LTR|ERVL 184995 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr9-7939 chr9 90718001 90718211 + 8.13 0.000 Intergenic Intergenic -75282 NM_017594 54769 Hs.165636 NM_017594 ENSG00000165023 DIRAS2 Di-Ras2 DIRAS family GTPase 2 protein-coding chr3-4644 chr3 30888504 30888714 + 8.13 0.000 intron (NM_207359, intron 1 of 14) intron (NM_207359, intron 1 of 14) 6052 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr15-4936 chr15 78031982 78032192 + 8.13 0.000 intron (NM_144572, intron 3 of 12) L1MEc|LINE|L1 -37862 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr1-10636 chr1 180515761 180515971 + 8.13 0.000 Intergenic Intergenic -13289 NM_032360 84320 Hs.200051 NM_032360 ENSG00000230124 ACBD6 - acyl-CoA binding domain containing 6 protein-coding chr16-6487 chr16 58479667 58479877 + 8.13 0.000 intron (NM_022910, intron 1 of 15) L2a|LINE|L2 14950 NM_022910 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr7-3286 chr7 27346894 27347104 + 8.13 0.000 Intergenic Intergenic -99770 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr4-7880 chr4 104742485 104742695 + 8.13 0.000 Intergenic Intergenic -247696 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr1-12920 chr1 117696177 117696387 + 8.13 0.000 Intergenic Intergenic 90234 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr20-1406 chr20 26164007 26164217 + 8.13 0.000 Intergenic Intergenic 44166 NR_030386 724033 NR_030386 ENSG00000284419 MIR663A MIR663|MIRN663|hsa-mir-663|hsa-mir-663a|mir-663a microRNA 663a ncRNA chr19-4147 chr19 32557970 32558180 + 8.13 0.000 Intergenic Intergenic -23115 NM_004708 9141 Hs.443831 NM_004708 ENSG00000105185 PDCD5 TFAR19 programmed cell death 5 protein-coding chr7-3852 chr7 101637382 101637592 + 8.13 0.000 Intergenic MER91C|DNA|hAT-Tip100 -8191 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr9-3512 chr9 29363472 29363682 + 8.13 0.000 Intergenic Intergenic -149976 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr11-2142 chr11 45352792 45353002 + 8.13 0.000 Intergenic AluSz|SINE|Alu -2474 NR_120558 101928812 Hs.444059 NR_120557 ENSG00000254427 LINC02696 - long intergenic non-protein coding RNA 2696 ncRNA chr19-2710 chr19 24188264 24188474 + 8.13 0.000 Intergenic BSR/Beta|Satellite|Satellite -24922 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo chr8-6222 chr8 37927944 37928154 + 8.13 0.000 Intergenic SVA_D|Retroposon|SVA 12075 NM_152413 137362 Hs.380740 NM_152413 ENSG00000169154 GOT1L1 - glutamic-oxaloacetic transaminase 1 like 1 protein-coding chr16-1633 chr16 1512257 1512467 + 8.13 0.000 intron (NM_014714, intron 30 of 30) intron (NM_014714, intron 30 of 30) -16316 NM_001256541 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr7-4011 chr7 146151048 146151258 + 8.13 0.000 Intergenic THE1D|LTR|ERVL-MaLR -623118 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr2-10884 chr2 65914198 65914408 + 8.13 0.000 Intergenic Intergenic 444025 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr5-8804 chr5 149646411 149646621 + 8.13 0.000 Intergenic Intergenic 65018 NM_001001669 389337 Hs.256206 NM_001001669 ENSG00000183111 ARHGEF37 - Rho guanine nucleotide exchange factor 37 protein-coding chr2-11669 chr2 7311538 7311748 + 8.13 0.000 Intergenic Intergenic -109618 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr1-14460 chr1 47239619 47239829 + 8.13 0.000 Intergenic Intergenic -7389 NM_003189 6886 Hs.705618 NM_003189 ENSG00000162367 TAL1 SCL|TCL5|bHLHa17|tal-1 TAL bHLH transcription factor 1, erythroid differentiation factor protein-coding chr2-8587 chr2 138105345 138105555 + 8.13 0.000 intron (NR_135526, intron 2 of 2) Charlie1a|DNA|hAT-Charlie 3566 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr11-2636 chr11 33774495 33774705 + 8.13 0.000 promoter-TSS (NM_033406) promoter-TSS (NM_033406) -80 NM_033406 26273 Hs.406787 NM_012175 ENSG00000110429 FBXO3 FBA|FBX3 F-box protein 3 protein-coding chr8-7517 chr8 143834953 143835163 + 8.13 0.000 3' UTR (NM_178564, exon 18 of 18) 3' UTR (NM_178564, exon 18 of 18) 2758 NR_106904 102466748 NR_106904 ENSG00000284142 MIR6845 hsa-mir-6845 microRNA 6845 ncRNA chr12-5814 chr12 25123475 25123685 + 8.13 0.000 intron (NR_147910, intron 7 of 11) intron (NR_147910, intron 7 of 11) 70874 NM_001204126 4033 Hs.124922 NM_006152 ENSG00000118308 LRMP JAW1 lymphoid restricted membrane protein protein-coding chr5-3533 chr5 15690705 15690915 + 8.13 0.000 intron (NM_001278317, intron 2 of 3) L1MA6|LINE|L1 -75808 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr5-4256 chr5 138410418 138410628 + 8.13 0.000 intron (NM_016604, intron 11 of 23) LTR13|LTR|ERVK -28534 NM_016606 51308 Hs.416090 NM_016606 ENSG00000132563 REEP2 C5orf19|SGC32445|SPG72|Yip2d receptor accessory protein 2 protein-coding chr9-8433 chr9 121655840 121656050 + 8.13 0.000 intron (NM_032552, intron 1 of 16) intron (NM_032552, intron 1 of 16) -86840 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr21-1615 chr21 19385795 19386005 + 8.13 0.000 Intergenic L2a|LINE|L2 513855 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr10-6115 chr10 132710314 132710524 + 8.13 0.000 exon (NM_001321042, exon 5 of 13) exon (NM_001321042, exon 5 of 13) 29144 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr16-3319 chr16 1288600 1288810 + 8.13 0.000 Intergenic Intergenic -20447 NM_194261 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr22-3454 chr22 41725028 41725238 + 8.13 0.000 intron (NM_152513, intron 7 of 30) AluSx3|SINE|Alu 25630 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr9-4704 chr9 126472406 126472616 + 8.13 0.000 intron (NM_033446, intron 7 of 9) intron (NM_033446, intron 7 of 9) -62007 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr15-4287 chr15 37993860 37994070 + 8.13 0.000 intron (NM_001370737, intron 13 of 13) L1MB3|LINE|L1 -46428 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LINC02345 - long intergenic non-protein coding RNA 2345 ncRNA chr5-4643 chr5 35130080 35130290 + 8.13 0.000 intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) -12063 NM_001204314 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr13-974 chr13 25975497 25975707 + 8.13 0.000 intron (NM_016529, intron 35 of 36) L1MC5a|LINE|L1 75458 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr2-11422 chr2 220641164 220641374 + 8.13 0.000 Intergenic L1MEc|LINE|L1 -734704 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr1-5974 chr1 36593674 36593884 + 8.13 0.000 Intergenic Intergenic -110465 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr3-6800 chr3 144719773 144719983 + 8.13 0.000 Intergenic Intergenic 746797 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr1-15152 chr1 105986121 105986331 + 8.13 0.000 intron (NR_146609, intron 5 of 5) intron (NR_146609, intron 5 of 5) 42027 NR_146609 105378884 Hs.568533 NR_146609 LINC01677 - long intergenic non-protein coding RNA 1677 ncRNA chr5-5460 chr5 138748704 138748914 + 8.13 0.000 intron (NR_134244, intron 1 of 1) intron (NR_134244, intron 1 of 1) 4500 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr7-6920 chr7 78030921 78031131 + 8.13 0.000 intron (NM_001301128, intron 20 of 20) L1ME1|LINE|L1 190896 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr5-4940 chr5 75861734 75861944 + 8.13 0.000 Intergenic L1PA16|LINE|L1 -144402 NM_001099271 134359 Hs.432726 NM_152408 ENSG00000152359 POC5 C5orf37 POC5 centriolar protein protein-coding chr8-2947 chr8 37822174 37822384 + 8.13 0.000 intron (NM_032777, intron 2 of 18) intron (NM_032777, intron 2 of 18) 25396 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr3-9265 chr3 40211341 40211551 + 8.13 0.000 intron (NM_001284424, intron 11 of 15) intron (NM_001284424, intron 11 of 15) 98252 NR_033965 440952 Hs.660388 NR_033965 ENSG00000280739 EIF1B-AS1 - EIF1B antisense RNA 1 ncRNA chrX-2073 chrX 20263450 20263660 + 8.13 0.000 intron (NM_004586, intron 1 of 21) intron (NM_004586, intron 1 of 21) 3354 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr2-11489 chr2 234519218 234519428 + 8.13 0.000 Intergenic Intergenic -22242 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr20-3124 chr20 34086870 34087080 + 8.13 0.000 Intergenic L2a|LINE|L2 25268 NM_001316364 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr6-3945 chr6 86943318 86943528 + 8.13 0.000 intron (NM_000865, intron 1 of 1) MIRc|SINE|MIR 5895 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr11-4396 chr11 77875837 77876047 + 8.13 0.000 intron (NR_133637, intron 3 of 4) L2c|LINE|L2 34804 NM_001363564 28971 Hs.745040 NM_024684 ENSG00000087884 AAMDC C11orf67|CK067|PTD015 adipogenesis associated Mth938 domain containing protein-coding chr7-4309 chr7 30595890 30596100 + 8.13 0.000 intron (NM_002047, intron 1 of 16) intron (NM_002047, intron 1 of 16) 1117 NM_002047 2617 Hs.404321 NM_002047 ENSG00000106105 GARS CMT2D|DSMAV|GlyRS|HMN5|SMAD1 glycyl-tRNA synthetase protein-coding chr8-3924 chr8 42090307 42090517 + 8.13 0.000 intron (NR_136589, intron 1 of 1) L1MC1|LINE|L1 -38425 NM_006766 7994 Hs.491577 NM_006766 ENSG00000083168 KAT6A MOZ|MRD32|MYST-3|MYST3|RUNXBP2|ZC2HC6A|ZNF220 lysine acetyltransferase 6A protein-coding chr2-10997 chr2 100353850 100354060 + 8.13 0.000 Intergenic Intergenic -31222 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr3-11197 chr3 193754140 193754350 + 8.13 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 89764 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr1-7583 chr1 222618802 222619012 + 8.13 0.000 intron (NM_198551, intron 1 of 27) intron (NM_198551, intron 1 of 27) 805 NM_001324062 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 MIA SH3 domain ER export factor 3 protein-coding chr7-8718 chr7 75630221 75630431 + 8.13 0.000 intron (NM_005338, intron 1 of 30) AluJb|SINE|Alu -102203 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr5-1954 chr5 59275699 59275909 + 8.13 0.000 5' UTR (NM_001197220, exon 1 of 15) 5' UTR (NM_001197220, exon 1 of 15) 311 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr13-3326 chr13 61053215 61053425 + 8.13 0.000 Intergenic AluJr|SINE|Alu 146560 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chrX-1482 chrX 135059453 135059663 + 8.13 0.000 Intergenic MER66-int|LTR|ERV1 -7367 NM_001078172 26071 Hs.460924 NM_015582 ENSG00000203950 RTL8A CXX1b|FAM127B|MAR8A|SIRH6 retrotransposon Gag like 8A protein-coding chr2-6088 chr2 174547019 174547229 + 8.13 0.000 Intergenic LTR78|LTR|ERV1 10948 NR_104080 101954271 NR_104080 ENSG00000207507 RNU6-9 U6-9 RNA, U6 small nuclear 9 snRNA chr22-3314 chr22 19395184 19395394 + 8.13 0.000 intron (NM_003325, intron 7 of 24) intron (NM_003325, intron 7 of 24) 36444 NM_003325 7290 Hs.474206 NM_003325 ENSG00000100084 HIRA DGCR1|TUP1|TUPLE1 histone cell cycle regulator protein-coding chr22-2527 chr22 24814739 24814949 + 8.13 0.000 intron (NM_001098498, intron 2 of 23) intron (NM_001098498, intron 2 of 23) 8623 NM_133454 129049 Hs.474397 NM_133454 ENSG00000167037 SGSM1 RUTBC2 small G protein signaling modulator 1 protein-coding chr15-3873 chr15 92511191 92511401 + 8.13 0.000 Intergenic Intergenic 39619 NR_161370 145858 Hs.367879 NM_153040 C15orf32 - chromosome 15 open reading frame 32 ncRNA chr2-8417 chr2 118403627 118403837 + 8.13 0.000 Intergenic Intergenic 199234 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr4-1150 chr4 77076116 77076326 + 8.13 0.000 promoter-TSS (NM_001348132) promoter-TSS (NM_001348132) -232 NM_006835 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr9-4715 chr9 127486026 127486236 + 8.13 0.000 intron (NM_001190723, intron 17 of 24) MIRb|SINE|MIR 33876 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr2-6438 chr2 154191788 154191998 + 8.13 0.000 intron (NM_052917, intron 4 of 12) LTR1|LTR|ERV1 247499 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr10-4481 chr10 80146385 80146595 + 8.13 0.000 Intergenic MER44B|DNA|TcMar-Tigger 13760 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr1-10623 chr1 179369779 179369989 + 8.13 0.000 intron (NR_073544, intron 3 of 25) intron (NR_073544, intron 3 of 25) 3840 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr11-9971 chr11 77271003 77271213 + 8.13 0.000 intron (NM_182833, intron 7 of 16) intron (NM_182833, intron 7 of 16) 30558 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr7-7804 chr7 2258615 2258825 + 8.13 0.000 intron (NM_013321, intron 7 of 10) intron (NM_013321, intron 7 of 10) -1143 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr2-9692 chr2 45028260 45028470 + 8.13 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -18913 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr13-2213 chr13 23349159 23349369 + 8.13 0.000 intron (NM_014363, intron 9 of 9) intron (NM_014363, intron 9 of 9) 26244 NM_001278055 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr17-7718 chr17 32936340 32936550 + 8.13 0.000 exon (NM_001033504, exon 5 of 7) exon (NM_001033504, exon 5 of 7) 8292 NM_015544 26022 Hs.3447 NM_015544 ENSG00000006042 TMEM98 TADA1 transmembrane protein 98 protein-coding chr4-7180 chr4 40565193 40565403 + 8.13 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) -49313 NM_019027 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr10-9018 chr10 122338261 122338471 + 8.13 0.000 TTS (NM_144587) TTS (NM_144587) -36342 NM_001330178 59338 Hs.643512 NM_021622 ENSG00000107679 PLEKHA1 TAPP1 pleckstrin homology domain containing A1 protein-coding chr14-3381 chr14 92876147 92876357 + 8.13 0.000 Intergenic L1ME4a|LINE|L1 31230 NR_135253 101929002 Hs.639356 NR_135253 ENSG00000258499 LINC02287 - long intergenic non-protein coding RNA 2287 ncRNA chr13-916 chr13 52450410 52450620 + 8.13 0.000 promoter-TSS (NM_001282169) promoter-TSS (NM_001282169) 119 NM_016075 51028 Hs.109520 NM_016075 ENSG00000136100 VPS36 C13orf9|CGI-145|EAP45 vacuolar protein sorting 36 homolog protein-coding chr15-4260 chr15 34653854 34654064 + 8.13 0.000 intron (NR_146869, intron 2 of 3) intron (NR_146869, intron 2 of 3) 1805 NR_146869 105370762 Hs.569462 NR_146869 ENSG00000261304 LINC02252 - long intergenic non-protein coding RNA 2252 ncRNA chr21-672 chr21 45913515 45913725 + 8.13 0.000 intron (NM_001130141, intron 7 of 12) intron (NM_001130141, intron 7 of 12) -59350 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr4-8405 chr4 152038362 152038572 + 8.13 0.000 Intergenic Intergenic -62286 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr7-6641 chr7 128839795 128840005 + 8.13 0.000 intron (NM_001127487, intron 8 of 46) intron (NM_001127487, intron 8 of 46) 9471 NM_001458 2318 Hs.58414 NM_001458 ENSG00000128591 FLNC ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5 filamin C protein-coding chr3-5932 chr3 43953912 43954122 + 8.13 0.000 Intergenic Intergenic -160195 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr6-3794 chr6 25343136 25343346 + 8.13 0.000 intron (NM_001173977, intron 2 of 36) intron (NM_001173977, intron 2 of 36) 63867 NM_001173977 55604 Hs.649550 NM_017640 ENSG00000079691 CARMIL1 CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5 capping protein regulator and myosin 1 linker 1 protein-coding chr17-7933 chr17 44827907 44828117 + 8.13 0.000 intron (NM_001080383, intron 1 of 2) intron (NM_001080383, intron 1 of 2) 2275 NM_005497 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr11-7085 chr11 121936210 121936420 + 8.13 0.000 Intergenic Intergenic 163529 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr1-9317 chr1 27137259 27137469 + 8.13 0.000 intron (NM_003047, intron 1 of 11) MIR3|SINE|MIR 17761 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr4-3074 chr4 147138383 147138593 + 8.13 0.000 Intergenic Intergenic -192602 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr1-11565 chr1 199926339 199926549 + 8.13 0.000 Intergenic Intergenic -101266 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr14-4009 chr14 41063676 41063886 + 8.13 0.000 intron (NR_109758, intron 3 of 3) MSTA|LTR|ERVL-MaLR 109070 NR_109758 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr3-5559 chr3 4504433 4504643 + 8.13 0.000 intron (NM_001168272, intron 2 of 60) intron (NM_001168272, intron 2 of 60) 11190 NM_002222 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr19-6946 chr19 47210258 47210468 + 8.13 0.000 non-coding (NR_027280, exon 9 of 9) non-coding (NR_027280, exon 9 of 9) -16579 NR_036158 100422899 NR_036158 ENSG00000265134 MIR3190 mir-3190 microRNA 3190 ncRNA chr2-10360 chr2 169117009 169117219 + 8.13 0.000 Intergenic (CTCCTCT)n|Simple_repeat|Simple_repeat 36007 NM_001142271 10170 Hs.179608 NM_005771 ENSG00000073737 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase 9 protein-coding chr9-3779 chr9 126420293 126420503 + 8.13 0.000 intron (NM_033446, intron 6 of 9) intron (NM_033446, intron 6 of 9) -9894 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr11-9382 chr11 55071315 55071525 + 8.13 0.000 Intergenic ALR/Alpha|Satellite|centr -190735 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding chr6-4866 chr6 88108815 88109025 + 8.13 0.000 Intergenic LTR16C|LTR|ERVL 36417 NM_033181 1268 Hs.75110 NM_016083 ENSG00000118432 CNR1 CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR cannabinoid receptor 1 protein-coding chr6-6943 chr6 16285277 16285487 + 8.13 0.000 intron (NM_006877, intron 6 of 8) intron (NM_006877, intron 6 of 8) 46795 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr5-3624 chr5 135670231 135670441 + 8.13 0.000 intron (NM_001349335, intron 3 of 10) intron (NM_001349335, intron 3 of 10) -16401 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr5-8352 chr5 120405967 120406177 + 8.13 0.000 Intergenic THE1B|LTR|ERVL-MaLR -58206 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr2-7679 chr2 30152588 30152798 + 8.13 0.000 intron (NM_001127400, intron 2 of 3) MIRb|SINE|MIR 5686 NM_001127399 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr1-7915 chr1 156859471 156859681 + 8.13 0.000 promoter-TSS (NM_014215) promoter-TSS (NM_014215) -459 NM_014215 3645 Hs.248138 NM_014215 ENSG00000027644 INSRR IRR insulin receptor related receptor protein-coding chr2-10004 chr2 22475583 22475793 + 8.13 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -60791 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr14-4974 chr14 75360738 75360948 + 8.13 0.000 Intergenic MamRep137|DNA|TcMar? 66439 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr12-7430 chr12 60410679 60410889 + 8.13 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 721414 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr5-7385 chr5 22418488 22418698 + 8.13 0.000 intron (NM_004061, intron 2 of 14) L1P3|LINE|L1 -204743 NM_001364107 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr2-4855 chr2 96509528 96509738 + 8.13 0.000 Intergenic Intergenic -1524 NR_104346 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr15-3824 chr15 77035263 77035473 + 8.13 0.000 intron (NM_001321137, intron 13 of 15) intron (NM_001321137, intron 13 of 15) 35741 NM_198902 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr7-6503 chr7 18109275 18109485 + 8.13 0.000 intron (NM_001204144, intron 1 of 12) intron (NM_001204144, intron 1 of 12) 17929 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr3-5315 chr3 127467083 127467293 + 8.13 0.000 Intergenic Intergenic 70592 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr12-3996 chr12 24055188 24055398 + 8.13 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -104261 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr10-3187 chr10 89603456 89603666 + 8.13 0.000 intron (NM_148977, intron 2 of 6) MIRc|SINE|MIR -10734 NR_029524 406901 NR_029524 ENSG00000198997 MIR107 MIRN107|miR-107 microRNA 107 ncRNA chr16-4912 chr16 89312496 89312706 + 8.13 0.000 intron (NM_001256182, intron 4 of 13) intron (NM_001256182, intron 4 of 13) -8532 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr19-2530 chr19 33904880 33905090 + 8.13 0.000 Intergenic Intergenic 108115 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr6-8114 chr6 126811425 126811635 + 8.13 0.000 Intergenic Intergenic -307141 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr8-6549 chr8 69397108 69397318 + 8.13 0.000 Intergenic Intergenic 51031 NR_110433 100505739 Hs.127115 NR_110433 LINC01603 - long intergenic non-protein coding RNA 1603 ncRNA chr2-10531 chr2 233442801 233443011 + 8.13 0.000 intron (NM_152879, intron 10 of 29) intron (NM_152879, intron 10 of 29) 54752 NM_003648 8527 Hs.471675 NM_003648 ENSG00000077044 DGKD DGKdelta|dgkd-2 diacylglycerol kinase delta protein-coding chr16-6382 chr16 52903262 52903472 + 8.13 0.000 Intergenic L1ME4b|LINE|L1 149506 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr6-6059 chr6 135300806 135301016 + 8.13 0.000 intron (NM_017651, intron 25 of 27) intron (NM_017651, intron 25 of 27) 61751 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr8-2863 chr8 135510960 135511170 + 8.13 0.000 intron (NM_006558, intron 1 of 8) intron (NM_006558, intron 1 of 8) 53609 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr10-4593 chr10 112307844 112308054 + 8.13 0.000 TTS (NR_028134) TTS (NR_028134) -8261 NR_106772 102465427 NR_106772 ENSG00000283688 MIR6715B hsa-mir-6715b microRNA 6715b ncRNA chr15-4897 chr15 76965046 76965256 + 8.13 0.000 Intergenic L3|LINE|CR1 -29529 NM_001321137 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chr21-1289 chr21 42188366 42188576 + 8.13 0.000 Intergenic Intergenic -11218 NM_207627 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr3-1925 chr3 185045712 185045922 + 8.13 0.000 intron (NM_001009921, intron 45 of 46) intron (NM_001009921, intron 45 of 46) 107243 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr10-8618 chr10 97897593 97897803 + 8.13 0.000 intron (NM_001206528, intron 8 of 14) intron (NM_001206528, intron 8 of 14) -21801 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr10-4738 chr10 1021252 1021462 + 8.13 0.000 intron (NM_033261, intron 3 of 4) intron (NM_033261, intron 3 of 4) -1280 NR_027709 55853 Hs.728538 NM_018470 ENSG00000232656 IDI2-AS1 C10orf110|HT009|IDI2-AS IDI2 antisense RNA 1 ncRNA chr2-8647 chr2 146762288 146762498 + 8.13 0.000 Intergenic Intergenic 175336 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr12-6558 chr12 119374617 119374827 + 8.13 0.000 intron (NM_178499, intron 1 of 13) MER41B|LTR|ERV1 39993 NM_178499 160777 Hs.98188 NM_178499 ENSG00000183273 CCDC60 - coiled-coil domain containing 60 protein-coding chr2-9067 chr2 201807824 201808034 + 8.13 0.000 exon (NM_001261436, exon 3 of 13) exon (NM_001261436, exon 3 of 13) 1350 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr4-1657 chr4 119627685 119627895 + 8.13 0.000 promoter-TSS (NM_033430) promoter-TSS (NM_033430) -53 NM_033430 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr1-8381 chr1 72754650 72754860 + 8.13 0.000 Intergenic L1MD1|LINE|L1 -472216 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr2-13509 chr2 150533070 150533280 + 8.13 0.000 Intergenic Intergenic 39046 NR_110241 101929260 Hs.732324 NR_110241 ENSG00000236049 LINC01920 - long intergenic non-protein coding RNA 1920 ncRNA chr4-4794 chr4 103298078 103298288 + 8.13 0.000 Intergenic L1PA13|LINE|L1 -99840 NM_001286734 1062 Hs.75573 NM_001813 ENSG00000138778 CENPE CENP-E|KIF10|MCPH13|PPP1R61 centromere protein E protein-coding chr22-1632 chr22 36277718 36277928 + 8.13 0.000 Intergenic Intergenic 9084 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr5-2698 chr5 78311680 78311890 + 8.13 0.000 Intergenic L1MCa|LINE|L1 -17030 NM_003664 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding chr14-3913 chr14 100878609 100878819 + 8.13 0.000 Intergenic Intergenic -2293 NR_029965 574038 NR_029965 ENSG00000208001 MIR431 MIRN431|hsa-mir-431|miRNA431|mir-431 microRNA 431 ncRNA chr17-3765 chr17 32277339 32277549 + 8.13 0.000 intron (NM_001363836, intron 2 of 8) intron (NM_001363836, intron 2 of 8) 11268 NM_001363834 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr7-9276 chr7 124819604 124819814 + 8.13 0.000 Intergenic Intergenic -28899 NM_001024603 154872 Hs.444163 NM_001024603 ENSG00000275356 C7orf77 - chromosome 7 open reading frame 77 protein-coding chr1-10760 chr1 200642397 200642607 + 8.13 0.000 intron (NM_001320181, intron 7 of 7) Charlie18a|DNA|hAT-Charlie -21751 NM_014875 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding chr2-7615 chr2 26611089 26611299 + 8.13 0.000 intron (NM_001029881, intron 3 of 6) intron (NM_001029881, intron 3 of 6) 30172 NM_001029881 130106 Hs.591579 NM_001029881 ENSG00000157884 CIB4 KIP4 calcium and integrin binding family member 4 protein-coding chr11-8961 chr11 20108492 20108702 + 8.13 0.000 intron (NM_182964, intron 36 of 37) AluSz6|SINE|Alu 51878 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr4-6323 chr4 89391078 89391288 + 8.13 0.000 Intergenic L1PA5|LINE|L1 -83383 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr10-6629 chr10 98320686 98320896 + 8.13 0.000 Intergenic Intergenic -52597 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr2-9687 chr2 42385356 42385566 + 8.13 0.000 Intergenic Intergenic -16504 NM_001319037 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr10-6282 chr10 91272206 91272416 + 8.13 0.000 intron (NM_001256549, intron 9 of 9) intron (NM_001256549, intron 9 of 9) 51648 NM_032373 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr16-4294 chr16 27721706 27721916 + 8.13 0.000 intron (NM_015202, intron 14 of 27) intron (NM_015202, intron 14 of 27) -2782 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr3-7033 chr3 172659010 172659220 + 8.13 0.000 intron (NM_001146276, intron 1 of 4) MIR|SINE|MIR 51952 NM_001146276 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr7-7372 chr7 64270856 64271066 + 8.13 0.000 Intergenic THE1D|LTR|ERVL-MaLR 42487 NM_153363 168417 Hs.520884 NM_153363 ENSG00000197123 ZNF679 - zinc finger protein 679 protein-coding chr7-5278 chr7 22572369 22572579 + 8.13 0.000 non-coding (NR_038393, exon 4 of 4) non-coding (NR_038393, exon 4 of 4) 9137 NR_038393 100506178 Hs.668122 NR_038393 ENSG00000232759 LOC100506178 - uncharacterized LOC100506178 ncRNA chr1-8439 chr1 96510499 96510709 + 8.13 0.000 Intergenic Intergenic -136479 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr2-9270 chr2 221347565 221347775 + 8.13 0.000 Intergenic MIRb|SINE|MIR 224634 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr1-8485 chr1 119907365 119907575 + 8.13 0.000 Intergenic L1M2|LINE|L1 -10955 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr17-4705 chr17 29989701 29989911 + 8.13 0.000 intron (NR_026738, intron 4 of 15) HERVK9-int|LTR|ERVK 48172 NM_198529 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr8-3388 chr8 60277495 60277705 + 8.13 0.000 intron (NR_135821, intron 2 of 9) AluSq2|SINE|Alu 3800 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr5-6217 chr5 74861562 74861772 + 8.13 0.000 intron (NM_015566, intron 1 of 12) AluSx1|SINE|Alu -4226 NR_134288 441086 Hs.653007 NR_134288 LOC441086 - uncharacterized LOC441086 ncRNA chr12-6598 chr12 125274796 125275006 + 8.13 0.000 intron (NM_001366854, intron 1 of 8) AluJr|SINE|Alu -51715 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr5-8365 chr5 121842012 121842222 + 8.13 0.000 Intergenic MER45B|DNA|hAT-Tip100 -9765 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr1-9495 chr1 37252198 37252408 + 8.13 0.000 Intergenic MIRc|SINE|MIR 90740 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr8-6856 chr8 99992732 99992942 + 8.13 0.000 intron (NM_015668, intron 20 of 27) L1PA6|LINE|L1 -11745 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr9-3459 chr9 3215781 3215991 + 8.13 0.000 Intergenic Intergenic 34297 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr7-5611 chr7 51856427 51856637 + 8.13 0.000 Intergenic Intergenic -463276 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chrX-4706 chrX 87379022 87379232 + 8.13 0.000 Intergenic L1M1|LINE|L1 -138675 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr1-15203 chr1 110214249 110214459 + 8.13 0.000 intron (NM_004978, intron 1 of 3) intron (NM_004978, intron 1 of 3) 4040 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr9-4705 chr9 126499407 126499617 + 8.13 0.000 intron (NM_033446, intron 9 of 9) intron (NM_033446, intron 9 of 9) -89008 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr3-4787 chr3 120815794 120816004 + 8.13 0.000 intron (NR_135570, intron 1 of 1) intron (NR_135570, intron 1 of 1) 20458 NR_135570 101926983 Hs.553055 NR_135570 ENSG00000243593 LINC02049 - long intergenic non-protein coding RNA 2049 ncRNA chr5-3220 chr5 90510825 90511035 + 8.13 0.000 intron (NM_001370351, intron 7 of 7) intron (NM_001370351, intron 7 of 7) 18654 NM_198273 116068 Hs.136235 NM_198273 ENSG00000176018 LYSMD3 - LysM domain containing 3 protein-coding chr14-1406 chr14 59004041 59004251 + 8.13 0.000 intron (NR_110547, intron 4 of 5) MER21C|LTR|ERVL 175858 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr7-7688 chr7 155693836 155694046 + 8.13 0.000 intron (NM_053043, intron 5 of 17) intron (NM_053043, intron 5 of 17) 49280 NM_053043 155435 Hs.591815 NM_053043 ENSG00000184863 RBM33 PRR8 RNA binding motif protein 33 protein-coding chr3-9708 chr3 65836071 65836281 + 8.13 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -57640 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr20-2505 chr20 33956448 33956658 + 8.13 0.000 Intergenic FRAM|SINE|Alu -37358 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr10-4891 chr10 18687727 18687937 + 8.13 0.000 Intergenic L1ME3A|LINE|L1 28401 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding chr6-8369 chr6 149234200 149234410 + 8.13 0.000 intron (NM_001292035, intron 2 of 6) intron (NM_001292035, intron 2 of 6) 16379 NM_001292035 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr3-8007 chr3 186502498 186502708 + 8.13 0.000 Intergenic Intergenic -8942 NR_033844 253573 Hs.97386 NR_033844 ENSG00000224406 LINC02052 - long intergenic non-protein coding RNA 2052 ncRNA chr1-9473 chr1 36240082 36240292 + 8.13 0.000 intron (NM_001321471, intron 2 of 12) MLT2B3|LTR|ERVL 15744 NM_001321471 9967 Hs.744057 NM_005119 ENSG00000054118 THRAP3 BCLAF2|TRAP150 thyroid hormone receptor associated protein 3 protein-coding chr11-7950 chr11 5123027 5123237 + 8.13 0.000 Intergenic Intergenic 9510 NM_001005160 390054 Hs.546593 NM_001005160 ENSG00000171944 OR52A5 OR11-33 olfactory receptor family 52 subfamily A member 5 protein-coding chrX-5198 chrX 134400777 134400987 + 8.13 0.000 intron (NM_032458, intron 5 of 9) L2c|LINE|L2 27570 NM_032458 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr9-8860 chr9 135836074 135836284 + 8.13 0.000 intron (NM_015447, intron 7 of 16) intron (NM_015447, intron 7 of 16) 71367 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr17-5559 chr17 44733963 44734173 + 8.13 0.000 intron (NM_145663, intron 6 of 13) LFSINE_Vert|SINE|tRNA -24920 NM_002390 4185 Hs.6088 NM_002390 ENSG00000073670 ADAM11 MDC ADAM metallopeptidase domain 11 protein-coding chr2-13731 chr2 168177887 168178097 + 8.13 0.000 intron (NM_013233, intron 2 of 17) intron (NM_013233, intron 2 of 17) 69603 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr2-6171 chr2 240946251 240946461 + 8.13 0.000 intron (NM_001351305, intron 15 of 31) intron (NM_001351305, intron 15 of 31) 21095 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr3-6260 chr3 70395667 70395877 + 8.13 0.000 Intergenic Intergenic -83134 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr18-2349 chr18 32478949 32479159 + 8.13 0.000 Intergenic Intergenic -8172 NM_022751 64762 Hs.444314 NM_022751 ENSG00000141441 GAREM1 C18orf11|FAM59A|GAREM|Gm944 GRB2 associated regulator of MAPK1 subtype 1 protein-coding chr6-4591 chr6 43789601 43789811 + 8.13 0.000 Intergenic Intergenic 17738 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr4-7834 chr4 101230796 101231006 + 8.13 0.000 intron (NM_001130691, intron 1 of 12) intron (NM_001130691, intron 1 of 12) 9971 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr22-1687 chr22 46169915 46170125 + 8.13 0.000 intron (NM_001001928, intron 2 of 7) intron (NM_001001928, intron 2 of 7) 19225 NM_001362873 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr4-4085 chr4 4339939 4340149 + 8.13 0.000 Intergenic Intergenic -46212 NM_001287763 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr12-8110 chr12 119466079 119466289 + 8.13 0.000 intron (NM_178499, intron 2 of 13) L2a|LINE|L2 -127590 NM_001136534 387890 Hs.530965 NM_001136534 ENSG00000224982 TMEM233 DSPB2|IFITMD2 transmembrane protein 233 protein-coding chr22-2136 chr22 38097382 38097592 + 8.13 0.000 intron (NM_025045, intron 6 of 13) intron (NM_025045, intron 6 of 13) 13197 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr19-4513 chr19 7679518 7679728 + 8.13 0.000 3' UTR (NM_174918, exon 7 of 7) 3' UTR (NM_174918, exon 7 of 7) -1210 NM_001042462 126003 Hs.432413 NM_174894 ENSG00000181029 TRAPPC5 TRS31 trafficking protein particle complex 5 protein-coding chr11-5479 chr11 76690582 76690792 + 8.13 0.000 intron (NR_024042, intron 18 of 20) intron (NR_024042, intron 18 of 20) -19940 NM_001370187 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr22-2747 chr22 39738758 39738968 + 8.13 0.000 Intergenic Intergenic 154897 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr13-2551 chr13 65497394 65497604 + 8.13 0.000 Intergenic Intergenic -368548 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr9-3317 chr9 90938732 90938942 + 8.13 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 111417 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr12-7681 chr12 88238568 88238778 + 8.13 0.000 Intergenic L1M1|LINE|L1 96366 NR_159381 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding chr1-12062 chr1 119451734 119451944 + 8.13 0.000 Intergenic Intergenic 36689 NM_000198 3284 Hs.654399 NM_000198 ENSG00000203859 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding chr21-1488 chr21 38800861 38801071 + 8.13 0.000 Intergenic Intergenic -4217 NM_001256295 2114 Hs.644231 NM_005239 ENSG00000157557 ETS2 ETS2IT1 ETS proto-oncogene 2, transcription factor protein-coding chr4-8633 chr4 174244409 174244619 + 8.13 0.000 intron (NM_012180, intron 3 of 5) intron (NM_012180, intron 3 of 5) -24116 NR_125896 101928509 Hs.147719 NR_125896 ENSG00000248174 LINC02268 - long intergenic non-protein coding RNA 2268 ncRNA chr17-3774 chr17 34826331 34826541 + 8.13 0.000 Intergenic Intergenic 135024 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chrX-4756 chrX 94976923 94977133 + 8.13 0.000 Intergenic L1PA13|LINE|L1 86198 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr22-3063 chr22 39718172 39718382 + 8.13 0.000 Intergenic AluSq2|SINE|Alu 147524 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr2-14065 chr2 197642416 197642626 + 8.13 0.000 intron (NM_144629, intron 3 of 8) intron (NM_144629, intron 3 of 8) 33066 NM_144629 130132 Hs.591615 NM_144629 ENSG00000162944 RFTN2 C2orf11|Raftlin-2 raftlin family member 2 protein-coding chr2-10829 chr2 54572784 54572994 + 8.13 0.000 intron (NM_178313, intron 1 of 30) intron (NM_178313, intron 1 of 30) 14495 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr17-8242 chr17 65656738 65656948 + 8.13 0.000 intron (NM_001353129, intron 24 of 26) intron (NM_001353129, intron 24 of 26) -95195 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr2-4183 chr2 190353197 190353407 + 8.13 0.000 intron (NM_001128928, intron 2 of 6) intron (NM_001128928, intron 2 of 6) 9713 NM_001128928 3628 Hs.32309 NM_002194 ENSG00000151689 INPP1 - inositol polyphosphate-1-phosphatase protein-coding chr3-8822 chr3 8123655 8123865 + 8.13 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -107453 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr8-7424 chr8 140445511 140445721 + 8.13 0.000 intron (NM_001160372, intron 2 of 22) intron (NM_001160372, intron 2 of 22) 12128 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr9-8636 chr9 129240753 129240963 + 8.13 0.000 Intergenic L2c|LINE|L2 -41558 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr10-4281 chr10 7200649 7200859 + 8.13 0.000 intron (NM_001029880, intron 13 of 20) intron (NM_001029880, intron 13 of 20) -13970 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr5-7113 chr5 154885 155095 + 8.13 0.000 exon (NM_052909, exon 8 of 20) exon (NM_052909, exon 8 of 20) -36505 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr8-7116 chr8 119673753 119673963 + 8.13 0.000 promoter-TSS (NM_001330600) promoter-TSS (NM_001330600) -468 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr20-4237 chr20 48395189 48395399 + 8.13 0.000 Intergenic Intergenic 35383 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr7-8741 chr7 76798740 76798950 + 8.13 0.000 Intergenic L2c|LINE|L2 -171542 NM_152992 22932 Hs.488877 NM_012230 ENSG00000146707 POMZP3 POM-ZP3|POM121 POM121 and ZP3 fusion protein-coding chr10-6458 chr10 31402539 31402749 + 8.13 0.000 intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) -2889 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr5-5287 chr5 124162731 124162941 + 8.13 0.000 intron (NR_125774, intron 4 of 5) GA-rich|Low_complexity|Low_complexity 275684 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr11-4035 chr11 10658158 10658368 + 8.13 0.000 intron (NM_130385, intron 1 of 20) intron (NM_130385, intron 1 of 20) -5962 NM_001098579 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr3-6408 chr3 99505996 99506206 + 8.13 0.000 Intergenic Intergenic -132493 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr4-2676 chr4 1411519 1411729 + 8.13 0.000 Intergenic Intergenic -5182 NM_001290079 54729 Hs.526396 NM_001290079 ENSG00000235608 NKX1-1 HSPX153|NKX-1.1|SAX2 NK1 homeobox 1 protein-coding chr3-10168 chr3 116965616 116965826 + 8.13 0.000 Intergenic Intergenic 44290 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr10-4486 chr10 80567390 80567600 + 8.13 0.000 intron (NM_001145719, intron 1 of 6) MLT1J2-int|LTR|ERVL-MaLR 26676 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr5-3336 chr5 133680739 133680949 + 8.13 0.000 Intergenic Intergenic -68303 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr4-5338 chr4 183639182 183639392 + 8.13 0.000 TTS (NM_001307922) TTS (NM_001307922) 19898 NM_001307922 201965 Hs.133337 NM_152682 ENSG00000182552 RWDD4 FAM28A|RWDD4A RWD domain containing 4 protein-coding chr10-9039 chr10 123766860 123767070 + 8.13 0.000 intron (NM_198148, intron 10 of 13) intron (NM_198148, intron 10 of 13) 100610 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr9-3999 chr9 22580924 22581134 + 8.13 0.000 Intergenic L1PA15|LINE|L1 -65171 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr1-7916 chr1 157193783 157193993 + 8.13 0.000 Intergenic Intergenic -55297 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr18-3519 chr18 75106462 75106672 + 8.13 0.000 Intergenic Intergenic 98946 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr7-5873 chr7 92098474 92098684 + 8.13 0.000 intron (NM_147185, intron 43 of 49) L2c|LINE|L2 35898 NM_000786 1595 Hs.417077 NM_000786 ENSG00000001630 CYP51A1 CP51|CYP51|CYPL1|LDM|P450-14DM|P450L1 cytochrome P450 family 51 subfamily A member 1 protein-coding chr10-5042 chr10 35958372 35958582 + 8.13 0.000 Intergenic MamTip2|DNA|hAT-Tip100 180175 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr7-5882 chr7 93191638 93191848 + 8.13 0.000 intron (NM_001346642, intron 9 of 9) intron (NM_001346642, intron 9 of 9) 27828 NM_198151 253012 Hs.443169 NM_198151 ENSG00000188175 HEPACAM2 MIKI HEPACAM family member 2 protein-coding chr10-4449 chr10 71514384 71514594 + 8.13 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -2569 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr4-1874 chr4 845311 845521 + 8.13 0.000 Intergenic Intergenic -19287 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr13-1907 chr13 50341291 50341501 + 8.13 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 169378 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr5-8565 chr5 136395198 136395408 + 8.13 0.000 Intergenic L1ME1|LINE|L1 -29827 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr4-8272 chr4 141229526 141229736 + 8.13 0.000 exon (NM_001292002, exon 5 of 9) exon (NM_001292002, exon 5 of 9) 8736 NM_014487 27309 Hs.120766 NM_014487 ENSG00000109445 ZNF330 HSA6591|NOA36 zinc finger protein 330 protein-coding chr1-7247 chr1 227764197 227764407 + 8.13 0.000 intron (NR_136657, intron 2 of 3) intron (NR_136657, intron 2 of 3) 28607 NM_001323934 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr10-4922 chr10 23414934 23415144 + 8.13 0.000 Intergenic L1MB8|LINE|L1 -24230 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr9-3625 chr9 90910278 90910488 + 8.13 0.000 Intergenic Intergenic 82963 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr14-2591 chr14 51139132 51139342 + 8.13 0.000 Intergenic Intergenic -43533 NM_052978 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr10-2200 chr10 32446759 32446969 + 8.13 0.000 promoter-TSS (NR_120660) promoter-TSS (NR_120660) 724 NR_109826 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding chrX-4339 chrX 46879898 46880108 + 8.13 0.000 3' UTR (NM_006915, exon 5 of 5) 3' UTR (NM_006915, exon 5 of 5) 19701 NR_046101 724087 Hs.679235 NR_046101 ENSG00000204904 LINC01545 CXorf31 long intergenic non-protein coding RNA 1545 ncRNA chr13-2125 chr13 94136834 94137044 + 8.13 0.000 intron (NM_005708, intron 4 of 8) L2b|LINE|L2 51052 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr6-8050 chr6 120933201 120933411 + 8.13 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 401174 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr11-9068 chr11 29963697 29963907 + 8.13 0.000 Intergenic LTR33|LTR|ERVL 18591 NR_132652 106456574 Hs.128812 NR_132652 ENSG00000261340 LINC01616 n341006 long intergenic non-protein coding RNA 1616 ncRNA chr22-2262 chr22 30282576 30282786 + 8.13 0.000 Intergenic Intergenic 6946 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 CASTOR1 GATSL3 cytosolic arginine sensor for mTORC1 subunit 1 protein-coding chr1-13868 chr1 21232882 21233092 + 8.13 0.000 intron (NM_001113347, intron 12 of 16) MER5B|DNA|hAT-Charlie 46628 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr9-4975 chr9 18720689 18720899 + 8.13 0.000 intron (NM_001040272, intron 14 of 28) AluSz|SINE|Alu 147488 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr4-2345 chr4 185497756 185497966 + 8.13 0.000 Intergenic AluSq2|SINE|Alu -26128 NM_001145411 256309 Hs.41101 NM_152775 ENSG00000168491 CCDC110 CT52|KM-HN-1|KMHN1 coiled-coil domain containing 110 protein-coding chr3-7833 chr3 107999313 107999523 + 8.13 0.000 Intergenic LTR39|LTR|ERV1 91670 NM_198793 961 Hs.446414 NM_001777 ENSG00000196776 CD47 IAP|MER6|OA3 CD47 molecule protein-coding chr7-5395 chr7 33594110 33594320 + 8.13 0.000 intron (NR_145411, intron 22 of 23) intron (NR_145411, intron 22 of 23) -310700 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr3-8747 chr3 1051175 1051385 + 8.13 0.000 Intergenic Intergenic -41744 NM_001349354 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr2-3214 chr2 221573674 221573884 + 8.13 0.000 intron (NM_001304536, intron 1 of 18) CpG-17047 423 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr1-7243 chr1 226437217 226437427 + 8.13 0.000 Intergenic Intergenic -29229 NM_001618 142 Hs.177766 NM_001618 ENSG00000143799 PARP1 ADPRT|ADPRT 1|ADPRT1|ARTD1|PARP|PARP-1|PPOL|pADPRT-1 poly(ADP-ribose) polymerase 1 protein-coding chr10-4658 chr10 126504656 126504866 + 8.13 0.000 non-coding (NR_146939, exon 4 of 12) non-coding (NR_146939, exon 4 of 12) 16732 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr7-7992 chr7 15922064 15922274 + 8.13 0.000 Intergenic Intergenic 233791 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr13-2055 chr13 51643234 51643444 + 8.13 0.000 intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 58877 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr20-4231 chr20 48159756 48159966 + 8.13 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -169744 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA chr1-14101 chr1 30840300 30840510 + 8.13 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 15753 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr7-9438 chr7 134235104 134235314 + 8.13 0.000 intron (NM_144648, intron 16 of 19) L2a|LINE|L2 81721 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr11-6259 chr11 57566122 57566332 + 8.13 0.000 intron (NM_198183, intron 1 of 3) intron (NM_198183, intron 1 of 3) 1445 NM_004223 9246 Hs.425777 NM_004223 ENSG00000156587 UBE2L6 RIG-B|UBCH8 ubiquitin conjugating enzyme E2 L6 protein-coding chr16-5085 chr16 84460886 84461096 + 8.13 0.000 intron (NR_146503, intron 2 of 2) L2b|LINE|L2 6370 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr8-5568 chr8 79907921 79908131 + 8.13 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -36289 NR_110954 101927040 Hs.350876 NR_110954 ENSG00000249328 LOC101927040 - uncharacterized LOC101927040 ncRNA chr5-9039 chr5 168917142 168917352 + 8.13 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) -95980 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr2-6465 chr2 162416825 162417035 + 8.13 0.000 intron (NM_033272, intron 9 of 15) intron (NM_033272, intron 9 of 15) 72562 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr4-5160 chr4 155570226 155570436 + 8.13 0.000 Intergenic Intergenic -96379 NM_001130687 2982 Hs.24258 NM_000856 ENSG00000164116 GUCY1A1 GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6 guanylate cyclase 1 soluble subunit alpha 1 protein-coding chr20-3257 chr20 1739152 1739362 + 8.13 0.000 Intergenic Intergenic 40489 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr2-9805 chr2 131659256 131659466 + 8.13 0.000 Intergenic Intergenic 22336 NR_108087 101927994 Hs.635757 NR_108087 ENSG00000224559 LINC01087 - long intergenic non-protein coding RNA 1087 ncRNA chr8-3214 chr8 127209358 127209568 + 8.13 0.000 non-coding (NR_108049, exon 2 of 2) non-coding (NR_108049, exon 2 of 2) 9805 NR_108049 100507056 Hs.343864 NR_108049 CCAT1 CARLO5|CARLo-5|onco-lncRNA-40 colon cancer associated transcript 1 ncRNA chr7-6585 chr7 81151143 81151353 + 8.13 0.000 Intergenic Intergenic -228859 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr1-14466 chr1 47563033 47563243 + 8.13 0.000 Intergenic Intergenic -125821 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr3-2935 chr3 55462016 55462226 + 8.13 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 19277 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr11-10161 chr11 93132717 93132927 + 8.13 0.000 Intergenic Charlie25|DNA|hAT-Charlie 64604 NM_001286139 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr20-2490 chr20 33080343 33080553 + 8.13 0.000 Intergenic Intergenic -1064 NM_182519 149954 Hs.38961 NM_182519 ENSG00000186191 BPIFB4 C20orf186|LPLUNC4|RY2G5|dJ726C3.5 BPI fold containing family B member 4 protein-coding chr1-5695 chr1 53519560 53519770 + 8.13 0.000 intron (NM_147193, intron 6 of 9) intron (NM_147193, intron 6 of 9) 60266 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr3-5794 chr3 27590475 27590685 + 8.13 0.000 Intergenic Intergenic -106196 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chrX-2063 chrX 19378299 19378509 + 8.13 0.000 intron (NM_001001671, intron 19 of 28) THE1C|LTR|ERVL-MaLR 34477 NM_000284 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr17-5410 chr17 34434702 34434912 + 8.13 0.000 Intergenic Intergenic -71574 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr6-4213 chr6 4235096 4235306 + 8.13 0.000 Intergenic LTR76|LTR|ERV1 -45172 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr11-9412 chr11 58388315 58388525 + 8.13 0.000 Intergenic Intergenic 14989 NM_001005469 441608 Hs.553826 NM_001005469 ENSG00000172769 OR5B3 OR11-239|OR5B13|OST129 olfactory receptor family 5 subfamily B member 3 protein-coding chr16-6441 chr16 56867316 56867526 + 8.13 0.000 intron (NM_001126108, intron 2 of 25) intron (NM_001126108, intron 2 of 25) 2214 NM_000339 6559 Hs.669115 NM_000339 ENSG00000070915 SLC12A3 NCC|NCCT|TSC solute carrier family 12 member 3 protein-coding chr1-4610 chr1 154699909 154700119 + 8.13 0.000 3' UTR (NM_001365837, exon 9 of 9) 3' UTR (NM_001365837, exon 9 of 9) -72017 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr1-6187 chr1 204574927 204575137 + 8.13 0.000 Intergenic MIR|SINE|MIR 58626 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr14-5224 chr14 97395125 97395335 + 8.13 0.000 Intergenic Intergenic -63586 NR_110165 101929241 Hs.650839 NR_110165 ENSG00000246084 LINC02325 - long intergenic non-protein coding RNA 2325 ncRNA chr7-4645 chr7 30677102 30677312 + 8.13 0.000 intron (NM_001202481, intron 4 of 13) intron (NM_001202481, intron 4 of 13) 5249 NM_001883 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr11-5881 chr11 11673644 11673854 + 8.13 0.000 Intergenic L2c|LINE|L2 -17027 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr14-4209 chr14 94768619 94768829 + 8.13 0.000 intron (NM_173849, intron 2 of 2) CpG 1438 NM_173849 145258 Hs.440438 NM_173849 ENSG00000133937 GSC SAMS goosecoid homeobox protein-coding chr11-9111 chr11 32797208 32797418 + 8.13 0.000 Intergenic AluJo|SINE|Alu -2655 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr10-8991 chr10 120760079 120760289 + 8.13 0.000 Intergenic MIRc|SINE|MIR 90995 NR_033850 283089 Hs.568750 NR_033850 ENSG00000227165 WDR11-AS1 - WDR11 antisense RNA 1 ncRNA chr2-7115 chr2 181304375 181304585 + 8.13 0.000 intron (NR_130784, intron 3 of 4) intron (NR_130784, intron 3 of 4) 1172 NR_039637 100616213 NR_039637 ENSG00000266705 MIR4437 mir-4437 microRNA 4437 ncRNA chr10-9037 chr10 123608179 123608389 + 8.13 0.000 Intergenic L2|LINE|L2 -58071 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr6-5620 chr6 48736653 48736863 + 8.13 0.000 Intergenic (AAGAC)n|Simple_repeat|Simple_repeat -668069 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr11-3528 chr11 9110223 9110433 + 8.13 0.000 Intergenic MIRb|SINE|MIR 15965 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr4-6164 chr4 39357359 39357569 + 8.13 0.000 intron (NM_001204747, intron 1 of 24) intron (NM_001204747, intron 1 of 24) 8898 NM_001204747 5981 Hs.507475 NM_002913 ENSG00000035928 RFC1 A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C subunit 1 protein-coding chr10-6774 chr10 1212158 1212368 + 8.13 0.000 intron (NM_018702, intron 7 of 9) intron (NM_018702, intron 7 of 9) 52495 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr11-10723 chr11 131583110 131583320 + 8.13 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) -42348 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr11-6484 chr11 68054493 68054703 + 8.13 0.000 intron (NM_001277, intron 11 of 11) intron (NM_001277, intron 11 of 11) 9804 NR_106811 102465451 NR_106811 ENSG00000275022 MIR6753 hsa-mir-6753 microRNA 6753 ncRNA chr10-3243 chr10 117581698 117581908 + 8.13 0.000 Intergenic L3|LINE|CR1 -36735 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr11-9139 chr11 33977229 33977439 + 8.13 0.000 Intergenic Intergenic -74397 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr13-3755 chr13 42794952 42795162 + 8.13 0.000 Intergenic Intergenic 13473 NM_001318932 144809 Hs.16970 NM_182508 ENSG00000179813 FAM216B C13orf30 family with sequence similarity 216 member B protein-coding chr1-12249 chr1 218659790 218660000 + 8.13 0.000 intron (NR_031644, intron 3 of 6) intron (NR_031644, intron 3 of 6) 149800 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr11-6806 chr11 92225964 92226174 + 8.13 0.000 intron (NM_001367949, intron 1 of 27) CpG 1035 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr20-1691 chr20 35326092 35326302 + 8.13 0.000 intron (NM_001184977, intron 5 of 7) L2c|LINE|L2 -33772 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr7-5918 chr7 98297235 98297445 + 8.13 0.000 intron (NM_018842, intron 12 of 13) intron (NM_018842, intron 12 of 13) 15654 NM_001159491 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr1-15116 chr1 101588747 101588957 + 8.13 0.000 Intergenic LTR53|LTR|ERVL 258228 NM_001288821 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr2-7795 chr2 43675663 43675873 + 8.13 0.000 exon (NM_001101330, exon 1 of 1) exon (NM_001101330, exon 1 of 1) 661 NM_001101330 728819 NM_001101330 ENSG00000223658 C1GALT1C1L - C1GALT1 specific chaperone 1 like protein-coding chr7-4408 chr7 100238962 100239172 + 8.13 0.000 intron (NR_028038, intron 1 of 6) AluSq|SINE|Alu 19819 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr1-14181 chr1 33258160 33258370 + 8.13 0.000 intron (NM_152493, intron 1 of 8) intron (NM_152493, intron 1 of 8) 1773 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr11-10151 chr11 92011419 92011629 + 8.13 0.000 Intergenic L1PA6|LINE|L1 -213510 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr12-2859 chr12 6639784 6639994 + 8.13 0.000 intron (NM_032489, intron 8 of 9) intron (NM_032489, intron 8 of 9) -3930 NM_020400 57121 Hs.155538 NM_020400 ENSG00000184574 LPAR5 GPR92|GPR93|KPG_010|LPA5 lysophosphatidic acid receptor 5 protein-coding chr6-7369 chr6 48566928 48567138 + 8.13 0.000 Intergenic MIRc|SINE|MIR -498344 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr12-7750 chr12 94614456 94614666 + 8.13 0.000 intron (NM_020698, intron 1 of 3) intron (NM_020698, intron 1 of 3) 1440 NM_001301036 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr3-10940 chr3 175526177 175526387 + 8.13 0.000 intron (NM_207015, intron 9 of 13) intron (NM_207015, intron 9 of 13) 156742 NR_039952 100616395 NR_039952 ENSG00000264974 MIR4789 - microRNA 4789 ncRNA chr15-2395 chr15 61747988 61748198 + 8.13 0.000 Intergenic AluSx|SINE|Alu 18175 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr13-2664 chr13 83215620 83215830 + 8.13 0.000 Intergenic Intergenic 666668 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr6-4373 chr6 21474485 21474695 + 8.13 0.000 Intergenic MER45B|DNA|hAT-Tip100 37302 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr17-7505 chr17 17095629 17095839 + 8.13 0.000 intron (NM_201274, intron 3 of 23) HAL1|LINE|L1 52974 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chrX-1923 chrX 153221912 153222122 + 8.13 0.000 Intergenic MIRb|SINE|MIR 42733 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chrX-1940 chrX 3081202 3081412 + 8.13 0.000 intron (NM_004042, intron 5 of 10) AluJr|SINE|Alu 14508 NM_004042 416 Hs.101674 NM_004042 ENSG00000062096 ARSF ASF arylsulfatase F protein-coding chr8-4814 chr8 15921166 15921376 + 8.13 0.000 Intergenic MLT2B3|LTR|ERVL 265001 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr2-7082 chr2 170677870 170678080 + 8.13 0.000 Intergenic Intergenic 36592 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr1-7379 chr1 25759109 25759319 + 8.13 0.000 intron (NM_020379, intron 6 of 11) intron (NM_020379, intron 6 of 11) -40979 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr4-4540 chr4 70338745 70338955 + 8.13 0.000 Intergenic Intergenic 3869 NM_033122 85438 Hs.120316 NM_033122 ENSG00000145309 CABS1 C4orf35|CLPH|NYD-SP26 calcium binding protein, spermatid associated 1 protein-coding chr2-3780 chr2 10573915 10574125 + 8.13 0.000 intron (NR_048552, intron 19 of 19) intron (NR_048552, intron 19 of 19) 115955 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr5-3012 chr5 8923492 8923702 + 8.13 0.000 Intergenic L1MA2|LINE|L1 83865 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr8-6503 chr8 65423424 65423634 + 8.13 0.000 Intergenic Intergenic 139137 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr2-8469 chr2 124316179 124316389 + 8.13 0.000 intron (NM_130773, intron 3 of 23) MIRc|SINE|MIR 290997 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr4-4849 chr4 110867902 110868112 + 8.13 0.000 Intergenic Intergenic -7360 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr10-4296 chr10 13637643 13637853 + 8.13 0.000 Intergenic Intergenic 50783 NM_003675 8559 Hs.660649 NM_003675 ENSG00000165630 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding chr2-10349 chr2 163862338 163862548 + 8.13 0.000 Intergenic Intergenic -126435 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr1-11902 chr1 51463476 51463686 + 8.13 0.000 intron (NM_001981, intron 7 of 24) intron (NM_001981, intron 7 of 24) -41486 NM_001159969 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding chr1-5922 chr1 19071663 19071873 + 8.13 0.000 Intergenic L2a|LINE|L2 -115092 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr8-2848 chr8 132395838 132396048 + 8.13 0.000 intron (NM_004519, intron 1 of 14) MIRb|SINE|MIR 51319 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr13-4084 chr13 77339208 77339418 + 8.13 0.000 Intergenic LTR16|LTR|ERVL -12219 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr1-16224 chr1 209185820 209186030 + 8.13 0.000 Intergenic Intergenic -139531 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr12-4665 chr12 47267571 47267781 + 8.13 0.000 Intergenic LTR79|LTR|ERVL 39723 NR_135024 105369747 Hs.88617 NR_135024 LOC105369747 - uncharacterized LOC105369747 ncRNA chr16-3514 chr16 23839187 23839397 + 8.13 0.000 intron (NM_002738, intron 2 of 16) AluJr|SINE|Alu 3309 NM_002738 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr3-6010 chr3 49001252 49001462 + 8.13 0.000 intron (NM_177939, intron 2 of 8) intron (NM_177939, intron 2 of 8) -6034 NM_018031 11180 Hs.654815 NM_018031 ENSG00000178252 WDR6 - WD repeat domain 6 protein-coding chr6-4451 chr6 34874970 34875180 + 8.13 0.000 3' UTR (NM_017754, exon 21 of 21) 3' UTR (NM_017754, exon 21 of 21) 12967 NM_005643 6882 Hs.112444 NM_005643 ENSG00000064995 TAF11 MGC:15243|PRO2134|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding chr9-7854 chr9 84933219 84933429 + 8.13 0.000 intron (NM_001018064, intron 13 of 17) intron (NM_001018064, intron 13 of 17) 227423 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr3-2624 chr3 189305177 189305387 + 8.13 0.000 intron (NM_198485, intron 4 of 5) intron (NM_198485, intron 4 of 5) -64688 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr5-5627 chr5 154740988 154741198 + 8.13 0.000 intron (NM_001367717, intron 1 of 18) intron (NM_001367717, intron 1 of 18) -14284 NM_033551 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr9-7010 chr9 115691245 115691455 + 8.13 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 52889 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr13-4065 chr13 75870678 75870888 + 8.13 0.000 promoter-TSS (NM_001257995) promoter-TSS (NM_001257995) -255 NM_001257995 729420 Hs.586820 NM_001257995 LMO7DN C13orf45 LMO7 downstream neighbor protein-coding chr6-1716 chr6 33750458 33750668 + 8.13 0.000 Intergenic L2b|LINE|L2 -3578 NM_001142883 117283 Hs.17253 NM_054111 ENSG00000161896 IP6K3 IHPK3|INSP6K3 inositol hexakisphosphate kinase 3 protein-coding chr16-2724 chr16 89101368 89101578 + 8.13 0.000 intron (NR_104293, intron 3 of 10) CpG 7621 NR_147929 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr20-2979 chr20 36592297 36592507 + 8.13 0.000 3' UTR (NM_001199515, exon 3 of 3) 3' UTR (NM_001199515, exon 3 of 3) -13377 NR_026562 55969 Hs.584985 NM_018840 ENSG00000101084 RAB5IF C20orf24|PNAS-11|RIP5 RAB5 interacting factor protein-coding chr6-3322 chr6 167893464 167893674 + 8.13 0.000 intron (NM_001207008, intron 8 of 31) intron (NM_001207008, intron 8 of 31) 65934 NM_001291964 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding chr9-8346 chr9 116415436 116415646 + 8.13 0.000 Intergenic Intergenic -14935 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr10-2467 chr10 23208902 23209112 + 8.13 0.000 intron (NM_001365862, intron 15 of 15) intron (NM_001365862, intron 15 of 15) 16695 NM_178161 256297 Hs.351503 NM_178161 ENSG00000168267 PTF1A PACA|PAGEN2|PTF1-p48|bHLHa29|p48 pancreas associated transcription factor 1a protein-coding chr5-4463 chr5 6840373 6840583 + 8.13 0.000 Intergenic Intergenic -12557 NR_036242 100422999 NR_036242 ENSG00000283420 MIR4278 - microRNA 4278 ncRNA chr19-2746 chr19 40213703 40213913 + 8.13 0.000 exon (NM_002446, exon 9 of 10) exon (NM_002446, exon 9 of 10) 4591 NM_152479 148014 Hs.631572 NM_152479 ENSG00000174521 TTC9B - tetratricopeptide repeat domain 9B protein-coding chr14-5435 chr14 105123374 105123584 + 8.13 0.000 Intergenic L1MB7|LINE|L1 27385 NR_106823 102465458 NR_106823 ENSG00000273778 MIR6765 hsa-mir-6765 microRNA 6765 ncRNA chr14-3158 chr14 69273214 69273424 + 8.13 0.000 intron (NM_020692, intron 1 of 15) intron (NM_020692, intron 1 of 15) 13161 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chrX-5168 chrX 132677518 132677728 + 8.13 0.000 intron (NM_001077188, intron 4 of 5) intron (NM_001077188, intron 4 of 5) 9981 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr2-6993 chr2 138421890 138422100 + 8.13 0.000 Intergenic Intergenic -79775 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr10-3314 chr10 3142448 3142658 + 8.13 0.000 intron (NR_038284, intron 1 of 3) intron (NR_038284, intron 1 of 3) 952 NR_038284 100507034 Hs.665365 NR_038284 ENSG00000237399 PITRM1-AS1 - PITRM1 antisense RNA 1 ncRNA chr17-4035 chr17 77047495 77047705 + 8.13 0.000 Intergenic AluJo|SINE|Alu -41043 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr8-5938 chr8 19209513 19209723 + 8.13 0.000 intron (NR_038919, intron 3 of 4) intron (NR_038919, intron 3 of 4) 35904 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr13-1977 chr13 19556953 19557163 + 8.13 0.000 intron (NR_073485, intron 2 of 23) L2c|LINE|L2 4516 NR_073485 93492 Hs.377488 NM_130785 ENSG00000132958 TPTE2 TPIP transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 protein-coding chr6-4947 chr6 101806815 101807025 + 8.13 0.000 intron (NM_001166247, intron 8 of 16) L2b|LINE|L2 407935 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr18-1940 chr18 35474981 35475191 + 8.13 0.000 intron (NM_194281, intron 4 of 4) L1MCa|LINE|L1 22522 NM_001308064 125476 Hs.464903 NM_194281 ENSG00000153391 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding chr3-7276 chr3 197607931 197608141 + 8.13 0.000 Intergenic Intergenic 19845 NR_003266 220729 Hs.478854 NR_003266 ENSG00000214135 LOC220729 - succinate dehydrogenase complex flavoprotein subunit A pseudogene pseudo chr5-6529 chr5 6569316 6569526 + 8.13 0.000 Intergenic L1MC5a|LINE|L1 -12715 NR_024423 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 SRHC long intergenic non-protein coding RNA 1018 ncRNA chr2-3814 chr2 25139003 25139213 + 8.13 0.000 exon (NM_001319099, exon 16 of 23) exon (NM_001319099, exon 16 of 23) 29472 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr2-3642 chr2 144517532 144517742 + 8.13 0.000 intron (NR_033258, intron 1 of 2) CpG-16650 -1977 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chr1-9334 chr1 28136940 28137150 + 8.13 0.000 Intergenic LTR8|LTR|ERV1 39645 NM_001164723 5724 Hs.77542 NM_000952 ENSG00000169403 PTAFR PAFR platelet activating factor receptor protein-coding chr6-7799 chr6 98354990 98355200 + 8.13 0.000 Intergenic Intergenic 330564 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr10-3260 chr10 124978033 124978243 + 8.13 0.000 intron (NM_017580, intron 5 of 8) intron (NM_017580, intron 5 of 8) 27880 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr20-1991 chr20 48167181 48167391 + 8.13 0.000 Intergenic L1ME3B|LINE|L1 -177169 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA chr16-3177 chr16 82435084 82435294 + 8.13 0.000 Intergenic Intergenic -191780 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chrX-4216 chrX 37564877 37565087 + 8.13 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -6679 NM_198511 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chr12-2920 chr12 58488024 58488234 + 8.13 0.000 Intergenic Intergenic -103573 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr9-7506 chr9 32402661 32402871 + 8.13 0.000 intron (NM_001278352, intron 2 of 21) intron (NM_001278352, intron 2 of 21) 18123 NM_001362840 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr6-6522 chr6 127205034 127205244 + 8.13 0.000 Intergenic Intergenic -61543 NM_001242851 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr12-7642 chr12 81990373 81990583 + 8.13 0.000 intron (NR_110089, intron 2 of 2) L1MC4a|LINE|L1 36759 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LINC02426 - long intergenic non-protein coding RNA 2426 ncRNA chr2-7624 chr2 26885730 26885940 + 8.13 0.000 intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 37411 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr5-5080 chr5 95946284 95946494 + 8.13 0.000 intron (NM_012081, intron 1 of 11) intron (NM_012081, intron 1 of 11) 15462 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr9-3358 chr9 115198085 115198295 + 8.13 0.000 intron (NR_163556, intron 1 of 7) intron (NR_163556, intron 1 of 7) 56372 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr6-6329 chr6 49978541 49978751 + 8.13 0.000 Intergenic Intergenic -9021 NM_001037729 245927 Hs.582789 NM_001037729 ENSG00000214642 DEFB113 DEFB-13 defensin beta 113 protein-coding chr5-5020 chr5 84233977 84234187 + 8.13 0.000 intron (NM_005711, intron 2 of 10) intron (NM_005711, intron 2 of 10) 150785 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr20-3442 chr20 49452208 49452418 + 8.13 0.000 intron (NM_004975, intron 1 of 1) intron (NM_004975, intron 1 of 1) 30355 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr14-4638 chr14 54364246 54364456 + 8.13 0.000 Intergenic Intergenic -32517 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chrX-1828 chrX 102044302 102044512 + 8.13 0.000 Intergenic L1PREC2|LINE|L1 -81272 NM_080390 140597 Hs.401835 NM_080390 ENSG00000184905 TCEAL2 MY0876G05|WEX1|my048 transcription elongation factor A like 2 protein-coding chr5-4750 chr5 52743918 52744128 + 8.13 0.000 Intergenic Intergenic -43893 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr8-2822 chr8 127499939 127500149 + 8.13 0.000 Intergenic Intergenic -17905 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr15-2691 chr15 81595394 81595604 + 8.13 0.000 Intergenic AluJb|SINE|Alu -221286 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr2-2757 chr2 203949238 203949448 + 8.13 0.000 intron (NM_012092, intron 1 of 4) intron (NM_012092, intron 1 of 4) 12595 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chrX-4763 chrX 95417430 95417640 + 8.13 0.000 Intergenic L2c|LINE|L2 -354309 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr15-3594 chr15 57218052 57218262 + 8.13 0.000 intron (NM_207038, intron 8 of 19) intron (NM_207038, intron 8 of 19) -1273 NM_001306220 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr11-5603 chr11 113534104 113534314 + 8.13 0.000 Intergenic MIR|SINE|MIR -58811 NM_000795 1813 Hs.73893 NM_000795 ENSG00000149295 DRD2 D2DR|D2R dopamine receptor D2 protein-coding chr4-5783 chr4 78218374 78218584 + 8.13 0.000 intron (NM_001166133, intron 2 of 41) intron (NM_001166133, intron 2 of 41) -70506 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr12-6779 chr12 8984492 8984702 + 8.13 0.000 intron (NR_137427, intron 1 of 2) L1MEf|LINE|L1 -4949 NM_005810 10219 Hs.558446 NM_005810 ENSG00000139187 KLRG1 2F1|CLEC15A|MAFA|MAFA-2F1|MAFA-L|MAFA-LIKE killer cell lectin like receptor G1 protein-coding chr14-3984 chr14 33915377 33915587 + 8.13 0.000 Intergenic Charlie2b|DNA|hAT-Charlie 35592 NM_001308103 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr15-2355 chr15 39335480 39335690 + 8.13 0.000 Intergenic Intergenic 84916 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr19-5794 chr19 34721118 34721328 + 8.13 0.000 Intergenic L1ME1|LINE|L1 -13020 NM_001145665 339318 Hs.720472 NM_001029997 ENSG00000197841 ZNF181 HHZ181 zinc finger protein 181 protein-coding chr14-2557 chr14 30437663 30437873 + 8.13 0.000 TTS (NR_151720) TTS (NR_151720) -121355 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr21-1561 chr21 10522508 10522718 + 8.13 0.000 intron (NM_199260, intron 1 of 21) L1MD|LINE|L1 1099 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr13-2615 chr13 75700674 75700884 + 8.13 0.000 intron (NM_001306080, intron 1 of 30) MER44C|DNA|TcMar-Tigger -59541 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr3-3798 chr3 14673751 14673961 + 8.13 0.000 Intergenic Intergenic -1285 NM_001184958 84077 Hs.661452 NM_032137 ENSG00000131379 C3orf20 - chromosome 3 open reading frame 20 protein-coding chr13-1769 chr13 113314277 113314487 + 8.13 0.000 intron (NM_005561, intron 4 of 8) intron (NM_005561, intron 4 of 8) 17143 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chrX-1945 chrX 4368052 4368262 + 8.13 0.000 Intergenic LTR1E|LTR|ERV1 265415 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr12-4495 chr12 21001681 21001891 + 8.13 0.000 intron (NM_001371097, intron 13 of 15) L1PBb|LINE|L1 -13910 NM_001009562 338821 Hs.729117 NM_001009562 ENSG00000205754 SLCO1B7 LST-3|LST-3TM12|LST3|SLC21A21 solute carrier organic anion transporter family member 1B7 (putative) protein-coding chr16-4600 chr16 68618079 68618289 + 8.13 0.000 Intergenic AluSx|SINE|Alu -27126 NM_001793 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr8-2208 chr8 6547936 6548146 + 8.13 0.000 intron (NM_001147, intron 1 of 8) intron (NM_001147, intron 1 of 8) 15204 NM_001147 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr15-4023 chr15 59816017 59816227 + 8.13 0.000 Intergenic Intergenic -126802 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr10-3419 chr10 34878593 34878803 + 8.13 0.000 Intergenic L1MC1|LINE|L1 62930 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr11-4784 chr11 330459 330669 + 8.13 0.000 Intergenic Intergenic -9704 NR_049759 10410 Hs.374650 NM_021034 ENSG00000142089 IFITM3 1-8U|DSPA2b|IP15 interferon induced transmembrane protein 3 protein-coding chr11-6661 chr11 76008944 76009154 + 8.13 0.000 intron (NM_003369, intron 11 of 14) intron (NM_003369, intron 11 of 14) 193839 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr6-4187 chr6 2634493 2634703 + 8.13 0.000 promoter-TSS (NR_131168) promoter-TSS (NR_131168) 5 NR_131168 154386 Hs.680574 NM_152554 ENSG00000164385 LINC01600 C6orf195|bA145H9.2 long intergenic non-protein coding RNA 1600 ncRNA chr10-3280 chr10 132883310 132883520 + 8.13 0.000 intron (NM_001200049, intron 27 of 57) L1PA17|LINE|L1 59155 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr20-3761 chr20 19880573 19880783 + 8.13 0.000 Intergenic Intergenic -5843 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr2-3785 chr2 12347174 12347384 + 8.13 0.000 intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) 148149 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr9-5204 chr9 73173017 73173227 + 8.13 0.000 Intergenic Intergenic 21257 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr10-5652 chr10 97253726 97253936 + 8.13 0.000 intron (NM_001204300, intron 5 of 10) Tigger7|DNA|TcMar-Tigger 16826 NM_001256423 84986 Hs.80305 NM_032900 ENSG00000213390 ARHGAP19 - Rho GTPase activating protein 19 protein-coding chr3-10745 chr3 155985786 155985996 + 8.13 0.000 Intergenic Intergenic 115241 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr14-2320 chr14 95446405 95446615 + 8.13 0.000 intron (NM_001363692, intron 7 of 16) intron (NM_001363692, intron 7 of 16) 29325 NM_152592 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|KASH3|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chr22-4108 chr22 43693166 43693376 + 8.13 0.000 intron (NM_198856, intron 8 of 29) L1MC3|LINE|L1 119034 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr2-7448 chr2 12494215 12494425 + 8.13 0.000 intron (NR_110196, intron 4 of 5) MLT2B4|LTR|ERVL -222552 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr14-5444 chr14 105337947 105338157 + 8.13 0.000 intron (NM_015197, intron 1 of 23) intron (NM_015197, intron 1 of 23) -22475 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr17-7666 chr17 30197765 30197975 + 8.13 0.000 3' UTR (NM_001045, exon 15 of 15) 3' UTR (NM_001045, exon 15 of 15) 37827 NM_001045 6532 Hs.29792 NM_001045 ENSG00000108576 SLC6A4 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT solute carrier family 6 member 4 protein-coding chr9-7940 chr9 90779564 90779774 + 8.13 0.000 Intergenic MER4B|LTR|ERV1 -21931 NM_001174168 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr6-2981 chr6 40775664 40775874 + 8.13 0.000 Intergenic Intergenic -188405 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr3-9017 chr3 20718957 20719167 + 8.13 0.000 Intergenic MER5A1|DNA|hAT-Charlie 376594 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr1-12247 chr1 218430951 218431161 + 8.13 0.000 intron (NR_138148, intron 2 of 6) intron (NR_138148, intron 2 of 6) -6577 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr8-3961 chr8 48536042 48536252 + 8.13 0.000 Intergenic Intergenic -15420 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chrX-3511 chrX 44668209 44668419 + 8.13 0.000 Intergenic Intergenic -125455 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr2-1620 chr2 231583272 231583482 + 8.13 0.000 Intergenic Intergenic -9487 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr1-7496 chr1 116067255 116067465 + 8.13 0.000 3' UTR (NM_018420, exon 12 of 12) 3' UTR (NM_018420, exon 12 of 12) -44395 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr7-7216 chr7 21250640 21250850 + 8.13 0.000 Intergenic Intergenic -177338 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr2-8341 chr2 108936996 108937206 + 8.13 0.000 intron (NM_022336, intron 1 of 11) intron (NM_022336, intron 1 of 11) 52119 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr8-3705 chr8 19170919 19171129 + 8.13 0.000 Intergenic Intergenic 74498 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr17-4904 chr17 73600269 73600479 + 8.13 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 44071 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chr10-5857 chr10 114252193 114252403 + 8.13 0.000 intron (NM_001272046, intron 2 of 13) intron (NM_001272046, intron 2 of 13) 12684 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr2-5976 chr2 60624451 60624661 + 8.13 0.000 Intergenic Intergenic -70902 NM_022893 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr7-8652 chr7 71302464 71302674 + 8.13 0.000 intron (NM_022479, intron 1 of 10) intron (NM_022479, intron 1 of 10) -5105 NR_037479 100500920 NR_037479 ENSG00000283278 MIR3914-2 - microRNA 3914-2 ncRNA chr17-5222 chr17 17098593 17098803 + 8.13 0.000 intron (NM_201274, intron 3 of 23) intron (NM_201274, intron 3 of 23) 55938 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr12-2670 chr12 51814742 51814952 + 8.13 0.000 Intergenic CpG 17070 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chr16-4906 chr16 89269234 89269444 + 8.13 0.000 intron (NM_001256182, intron 13 of 13) AluJb|SINE|Alu -26789 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr3-5720 chr3 16113180 16113390 + 8.13 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -61395 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr4-2827 chr4 42095727 42095937 + 8.13 0.000 Intergenic Intergenic 56823 NM_001159547 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr15-1587 chr15 76160656 76160866 + 8.13 0.000 intron (NM_152335, intron 5 of 10) intron (NM_152335, intron 5 of 10) 20725 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr12-3936 chr12 1418282 1418492 + 8.13 0.000 intron (NR_027948, intron 18 of 19) MER21A|LTR|ERVL -82104 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr12-4735 chr12 51759301 51759511 + 8.13 0.000 intron (NM_001369788, intron 14 of 25) MER44B|DNA|TcMar-Tigger 72511 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chr3-2925 chr3 53236108 53236318 + 8.13 0.000 intron (NM_001135055, intron 4 of 14) intron (NM_001135055, intron 4 of 14) 19809 NM_001064 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr12-4375 chr12 4822804 4823014 + 8.13 0.000 intron (NM_002235, intron 1 of 1) intron (NM_002235, intron 1 of 1) 13733 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding chr14-1842 chr14 64554370 64554580 + 8.13 0.000 intron (NM_172365, intron 3 of 11) intron (NM_172365, intron 3 of 11) 4514 NM_172365 145376 Hs.144696 NM_172365 ENSG00000165807 PPP1R36 C14orf50 protein phosphatase 1 regulatory subunit 36 protein-coding chr16-3078 chr16 64413490 64413700 + 8.13 0.000 Intergenic Intergenic 708468 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr3-10621 chr3 146190240 146190450 + 8.13 0.000 Intergenic Intergenic -28850 NM_000935 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr14-3044 chr14 59438245 59438455 + 8.13 0.000 Intergenic L1MB7|LINE|L1 27030 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding chr5-8331 chr5 118069464 118069674 + 8.13 0.000 intron (NR_104997, intron 2 of 2) intron (NR_104997, intron 2 of 2) -213005 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr4-5914 chr4 142696499 142696709 + 8.13 0.000 intron (NM_003866, intron 2 of 26) intron (NM_003866, intron 2 of 26) 149931 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr8-5779 chr8 142579199 142579409 + 8.13 0.000 Intergenic Intergenic 35175 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chrX-3899 chrX 8145607 8145817 + 8.13 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 18747 NR_030380 723779 NR_030380 ENSG00000207628 MIR651 MIRN651|hsa-mir-651|mir-651 microRNA 651 ncRNA chr16-4312 chr16 28993167 28993377 + 8.13 0.000 Intergenic AluSx1|SINE|Alu 8220 NM_001014987 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr17-2250 chr17 9021658 9021868 + 8.13 0.000 intron (NM_004822, intron 1 of 6) CpG 253 NM_004822 9423 Hs.660885 NM_004822 ENSG00000065320 NTN1 MRMV4|NTN1L netrin 1 protein-coding chr10-6011 chr10 125297034 125297244 + 8.13 0.000 Intergenic MIRb|SINE|MIR -136109 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr18-2967 chr18 22604518 22604728 + 8.13 0.000 Intergenic Intergenic 182214 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr4-4514 chr4 62560879 62561089 + 8.13 0.000 Intergenic MER20|DNA|hAT-Charlie -399219 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr13-3065 chr13 36979686 36979896 + 8.13 0.000 intron (NM_013338, intron 6 of 9) AluSz|SINE|Alu 19549 NM_013338 29880 Hs.507769 NM_013338 ENSG00000120697 ALG5 bA421P11.2 ALG5 dolichyl-phosphate beta-glucosyltransferase protein-coding chr18-3569 chr18 79200042 79200252 + 8.13 0.000 intron (NR_148360, intron 9 of 31) Tigger3b|DNA|TcMar-Tigger 130753 NM_198531 374868 Hs.465475 NM_198531 ENSG00000166377 ATP9B ATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1 ATPase phospholipid transporting 9B (putative) protein-coding chr2-7712 chr2 33475904 33476114 + 8.13 0.000 promoter-TSS (NM_001139488) promoter-TSS (NM_001139488) -640 NM_001349977 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding chr16-6102 chr16 12942055 12942265 + 8.13 0.000 intron (NM_001145204, intron 2 of 4) intron (NM_001145204, intron 2 of 4) 40562 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr16-4411 chr16 50857960 50858170 + 8.13 0.000 Intergenic Intergenic -20708 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chr19-5249 chr19 45143129 45143339 + 8.13 0.000 intron (NM_019121, intron 7 of 12) L2a|LINE|L2 16916 NM_198478 284353 Hs.299256 NM_198478 NKPD1 - NTPase KAP family P-loop domain containing 1 protein-coding chr5-4439 chr5 2584763 2584973 + 8.13 0.000 Intergenic (ATGG)n|Simple_repeat|Simple_repeat -127723 NR_145480 101234261 NR_145480 ENSG00000281560 LSINCT5 - long stress-induced non-coding transcript 5 ncRNA chr4-7117 chr4 35690068 35690278 + 8.13 0.000 Intergenic Intergenic 553766 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr4-8643 chr4 175641835 175642045 + 8.13 0.000 intron (NM_201592, intron 4 of 6) AluSx1|SINE|Alu 145736 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr8-3967 chr8 49634116 49634326 + 8.13 0.000 Intergenic Intergenic -122041 NR_134294 100507464 Hs.245745 NR_134294 ENSG00000253380 LOC100507464 - uncharacterized LOC100507464 ncRNA chr17-3304 chr17 61284273 61284483 + 8.13 0.000 intron (NM_001330413, intron 23 of 25) LTR12_|LTR|ERV1 83326 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr10-7591 chr10 19655589 19655799 + 8.13 0.000 intron (NM_001142308, intron 36 of 39) intron (NM_001142308, intron 36 of 39) 72856 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr2-10514 chr2 230141922 230142132 + 8.13 0.000 Intergenic MSTA|LTR|ERVL-MaLR -73103 NM_152527 151473 Hs.504317 NM_152527 ENSG00000163053 SLC16A14 MCT14 solute carrier family 16 member 14 protein-coding chr7-3661 chr7 44871611 44871821 + 8.13 0.000 Intergenic SVA_A|Retroposon|SVA 10084 NR_039801 100616393 NR_039801 ENSG00000284261 MIR4657 mir-4657 microRNA 4657 ncRNA chr5-7087 chr5 176683737 176683947 + 8.13 0.000 Intergenic L1MEf|LINE|L1 36358 NM_001366492 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr18-441 chr18 8609699 8609909 + 8.13 0.000 exon (NM_001025300, exon 1 of 6) exon (NM_001025300, exon 1 of 6) 359 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr17-8200 chr17 63407101 63407311 + 8.13 0.000 intron (NM_025185, intron 20 of 25) intron (NM_025185, intron 20 of 25) 33061 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr5-3202 chr5 80846357 80846567 + 8.13 0.000 intron (NM_002439, intron 20 of 23) L1PA5|LINE|L1 -113901 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding chr12-7881 chr12 106058138 106058348 + 8.13 0.000 Intergenic Intergenic 81790 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr4-3447 chr4 94523568 94523778 + 8.13 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 71731 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr9-3160 chr9 113682502 113682712 + 8.13 0.000 Intergenic Intergenic 88478 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr19-1870 chr19 18941104 18941314 + 8.13 0.000 promoter-TSS (NM_001145722) promoter-TSS (NM_001145722) 8 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr1-13403 chr1 1962139 1962349 + 8.13 0.000 intron (NM_001304360, intron 14 of 38) AluSq|SINE|Alu 41542 NM_001304360 85452 Hs.232092 NM_001003808 ENSG00000142609 CFAP74 C1orf222|KIAA1751 cilia and flagella associated protein 74 protein-coding chrX-1109 chrX 15782510 15782720 + 8.13 0.000 exon (NM_007220, exon 8 of 8) exon (NM_007220, exon 8 of 8) 4974 NR_002725 8551 Hs.653287 NR_002725 ENSG00000281371 INE2 NCRNA00011 inactivation escape 2 ncRNA chr16-2281 chr16 3158457 3158667 + 8.13 0.000 Intergenic CpG 14271 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chr3-4996 chr3 21672428 21672638 + 8.13 0.000 intron (NM_024697, intron 1 of 7) MamSINE1|SINE|tRNA-RTE 78677 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr5-2454 chr5 135066339 135066549 + 8.13 0.000 intron (NR_161235, intron 2 of 5) MIR|SINE|MIR -26397 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr16-5866 chr16 1656977 1657187 + 8.13 0.000 intron (NM_020825, intron 9 of 19) intron (NM_020825, intron 9 of 19) -21197 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 JPT2 C16orf34|HN1L|L11 Jupiter microtubule associated homolog 2 protein-coding chr4-7548 chr4 77247853 77248063 + 8.13 0.000 Intergenic Intergenic 90751 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr11-2906 chr11 64063602 64063812 + 8.13 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -40183 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr1-13834 chr1 19760799 19761009 + 8.13 0.000 intron (NM_001349112, intron 5 of 14) intron (NM_001349112, intron 5 of 14) 38445 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr11-4852 chr11 26486217 26486427 + 8.13 0.000 intron (NM_001313727, intron 1 of 23) AluSx4|SINE|Alu 12420 NM_001313727 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chrX-3352 chrX 136968691 136968901 + 8.13 0.000 Intergenic L1ME1|LINE|L1 62878 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr15-4184 chr15 98841736 98841946 + 8.13 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 57415 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr10-7567 chr10 17301499 17301709 + 8.13 0.000 Intergenic Intergenic -71619 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr1-13951 chr1 24220438 24220648 + 8.13 0.000 Intergenic L2a|LINE|L2 20303 NR_027087 284632 Hs.638906 NR_027087 ENSG00000230023 LINC02800 - long intergenic non-protein coding RNA 2800 ncRNA chr2-14698 chr2 237965756 237965966 + 8.13 0.000 Intergenic Intergenic -1084 NM_001278307 140739 Hs.471785 NM_080678 ENSG00000184182 UBE2F NCE2 ubiquitin conjugating enzyme E2 F (putative) protein-coding chr2-7321 chr2 240805158 240805368 + 8.13 0.000 intron (NM_004321, intron 1 of 46) L1MEd|LINE|L1 14956 NM_001320705 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr14-3908 chr14 100536512 100536722 + 8.13 0.000 TTS (NM_020836) TTS (NM_020836) 31453 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr2-8223 chr2 96458001 96458211 + 8.13 0.000 Intergenic L1PA8|LINE|L1 47251 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr4-3204 chr4 26020269 26020479 + 8.13 0.000 Intergenic MER41B|LTR|ERV1 106182 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr2-7474 chr2 15744840 15745050 + 8.13 0.000 Intergenic Intergenic 54163 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr1-9863 chr1 65280502 65280712 + 8.13 0.000 intron (NM_014787, intron 1 of 18) intron (NM_014787, intron 1 of 18) 15858 NM_014787 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr5-2070 chr5 139715382 139715592 + 8.13 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 30736 NR_105053 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr7-6425 chr7 157352131 157352341 + 8.13 0.000 intron (NM_005494, intron 1 of 7) AluSc5|SINE|Alu 15232 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr1-7802 chr1 52669081 52669291 + 8.13 0.000 TTS (NR_135157) TTS (NR_135157) 29161 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chrX-1455 chrX 93363899 93364109 + 8.13 0.000 Intergenic Intergenic 309574 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr8-2980 chr8 93262631 93262841 + 8.13 0.000 Intergenic Intergenic -95886 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr12-5254 chr12 109538372 109538582 + 8.13 0.000 Intergenic MIRb|SINE|MIR 35027 NR_038118 326625 Hs.12106 NM_052845 ENSG00000139428 MMAB ATR|CFAP23|cblB|cob metabolism of cobalamin associated B protein-coding chr20-1424 chr20 37274669 37274879 + 8.13 0.000 Intergenic L1MC5|LINE|L1 -14881 NM_001003897 63905 Hs.6126 NM_022077 ENSG00000101363 MANBAL - mannosidase beta like protein-coding chr8-7154 chr8 122525699 122525909 + 8.13 0.000 intron (NR_131202, intron 2 of 3) L2a|LINE|L2 42840 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr12-3235 chr12 57586392 57586602 + 8.13 0.000 3' UTR (NM_001354705, exon 26 of 26) 3' UTR (NM_001354705, exon 26 of 26) -4695 NM_001146260 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr14-2164 chr14 90781355 90781565 + 8.13 0.000 intron (NM_001010854, intron 2 of 19) L1MB8|LINE|L1 34957 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr7-9375 chr7 130688920 130689130 + 8.13 0.000 Intergenic L2c|LINE|L2 -1593 NM_001304968 114960 Hs.592266 NM_052933 ENSG00000213265 TSGA13 - testis specific 13 protein-coding chr6-7761 chr6 93991352 93991562 + 8.13 0.000 Intergenic L1MA5|LINE|L1 273154 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr16-3311 chr16 107328 107538 + 8.13 0.000 intron (NM_001039476, intron 4 of 10) AluSx4|SINE|Alu 29208 NM_001015052 4350 Hs.459596 NM_002434 ENSG00000103152 MPG AAG|ADPG|APNG|CRA36.1|MDG|Mid1|PIG11|PIG16|anpg N-methylpurine DNA glycosylase protein-coding chr17-4797 chr17 49549605 49549815 + 8.13 0.000 intron (NR_103773, intron 1 of 2) intron (NR_103773, intron 1 of 2) 24354 NR_103773 100288866 Hs.720309 NR_103773 ENSG00000249906 LOC100288866 - uncharacterized LOC100288866 ncRNA chr15-4117 chr15 78890612 78890822 + 8.13 0.000 intron (NM_006791, intron 5 of 11) AluJb|SINE|Alu 17728 NM_001265604 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chr9-6732 chr9 12565310 12565520 + 8.13 0.000 Intergenic BLACKJACK|DNA|hAT-Blackjack -127970 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr6-5514 chr6 166136533 166136743 + 8.13 0.000 Intergenic L1PBa|LINE|L1 31213 NM_001366285 6862 Hs.389457 NM_003181 ENSG00000164458 TBXT SAVA|T|TFT T-box transcription factor T protein-coding chr11-10125 chr11 88480651 88480861 + 8.13 0.000 Intergenic Intergenic -23820 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr13-3250 chr13 33386414 33386624 + 8.13 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -51253 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr15-1522 chr15 59879645 59879855 + 8.13 0.000 Intergenic Intergenic -124561 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr8-4145 chr8 75401373 75401583 + 8.13 0.000 Intergenic AluJb|SINE|Alu -6171 NM_001330561 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr12-5215 chr12 106629890 106630100 + 8.13 0.000 intron (NM_001206691, intron 2 of 17) L1MC5|LINE|L1 28847 NM_001206691 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr16-3877 chr16 71426513 71426723 + 8.13 0.000 promoter-TSS (NR_146574) promoter-TSS (NR_146574) -154 NR_146574 105371333 Hs.578738 NR_146574 ENSG00000261348 LINC02136 - long intergenic non-protein coding RNA 2136 ncRNA chr7-9032 chr7 101625870 101626080 + 8.13 0.000 intron (NM_138403, intron 1 of 7) intron (NM_138403, intron 1 of 7) 3321 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr1-9774 chr1 56068988 56069198 + 8.13 0.000 Intergenic Intergenic 124006 NR_147161 105378738 Hs.121473 NR_147161 ENSG00000233079 LINC01755 - long intergenic non-protein coding RNA 1755 ncRNA chr22-4126 chr22 44385321 44385531 + 8.13 0.000 Intergenic Intergenic -57901 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 - long intergenic non-protein coding RNA 1656 ncRNA chr8-5704 chr8 126571071 126571281 + 8.13 0.000 Intergenic Intergenic -12698 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr1-11759 chr1 20413049 20413259 + 8.13 0.000 intron (NR_033887, intron 1 of 11) MIR3|SINE|MIR 15640 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr1-15936 chr1 186985846 186986056 + 8.13 0.000 intron (NM_024420, intron 17 of 17) intron (NM_024420, intron 17 of 17) -106891 NR_126347 104169671 NR_126347 ENSG00000230426 LINC01036 - long intergenic non-protein coding RNA 1036 ncRNA chr2-10336 chr2 158394496 158394706 + 8.13 0.000 intron (NM_138803, intron 1 of 13) intron (NM_138803, intron 1 of 13) 62152 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr5-9100 chr5 172795632 172795842 + 8.13 0.000 Intergenic MIRb|SINE|MIR -24542 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr15-4567 chr15 58476411 58476621 + 8.13 0.000 intron (NR_120338, intron 2 of 2) intron (NR_120338, intron 2 of 2) 22219 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr2-12845 chr2 96325295 96325505 + 8.13 0.000 promoter-TSS (NM_178495) promoter-TSS (NM_178495) 69 NM_001163523 150771 Hs.65009 NM_178495 ENSG00000198885 ITPRIPL1 KIAA1754L ITPRIP like 1 protein-coding chr5-5904 chr5 38402051 38402261 + 8.13 0.000 intron (NR_102749, intron 1 of 1) intron (NR_102749, intron 1 of 1) 1315 NR_102749 100506475 Hs.662304 NR_102749 ENSG00000248572 EGFLAM-AS2 - EGFLAM antisense RNA 2 ncRNA chr7-9605 chr7 149053822 149054032 + 8.13 0.000 Intergenic Intergenic -25422 NR_163907 chr1-6609 chr1 39525680 39525890 + 8.13 0.000 exon (NM_181809, exon 7 of 7) exon (NM_181809, exon 7 of 7) 10919 NR_132962 192217 Hs.472491 NR_132962 ENSG00000237624 OXCT2P1 OXCT2P 3-oxoacid CoA-transferase 2 pseudogene 1 pseudo chr5-5722 chr5 168757005 168757215 + 8.13 0.000 intron (NM_003062, intron 16 of 35) intron (NM_003062, intron 16 of 35) 11145 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr9-8092 chr9 98521061 98521271 + 8.13 0.000 intron (NM_005458, intron 3 of 18) L1MB7|LINE|L1 187769 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr1-8456 chr1 109891067 109891277 + 8.13 0.000 Intergenic L2c|LINE|L2 -19677 NM_172210 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr4-5357 chr4 185283583 185283793 + 8.13 0.000 intron (NM_001317781, intron 5 of 18) MIRb|SINE|MIR 79451 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr2-12392 chr2 54382698 54382908 + 8.13 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 51919 NM_001369401 129852 Hs.732626 NM_173486 ENSG00000177994 C2orf73 - chromosome 2 open reading frame 73 protein-coding chr6-6545 chr6 132116921 132117131 + 8.13 0.000 Intergenic Intergenic -1763 NR_039673 100616191 NR_039673 ENSG00000265669 MIR548AJ1 - microRNA 548aj-1 ncRNA chr4-3504 chr4 144137472 144137682 + 8.13 0.000 intron (NM_001308187, intron 1 of 5) intron (NM_001308187, intron 1 of 5) 3141 NM_002099 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr11-9053 chr11 28736323 28736533 + 8.13 0.000 Intergenic Intergenic -258880 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr5-4100 chr5 72244963 72245173 + 8.13 0.000 intron (NM_001286748, intron 4 of 11) intron (NM_001286748, intron 4 of 11) 65281 NM_001324255 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr5-3617 chr5 132464699 132464909 + 8.13 0.000 intron (NR_161242, intron 3 of 3) intron (NR_161242, intron 3 of 3) 25969 NR_149068 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr8-5893 chr8 16701440 16701650 + 8.13 0.000 Intergenic Intergenic 300800 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr8-6402 chr8 56006591 56006801 + 8.13 0.000 intron (NM_002350, intron 12 of 12) L2b|LINE|L2 67205 NR_002437 26795 NR_002437 ENSG00000238650 SNORD54 RNU54|U54 small nucleolar RNA, C/D box 54 snoRNA chr8-5827 chr8 4999710 4999920 + 8.13 0.000 Intergenic Intergenic -4901 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr2-6827 chr2 63326773 63326983 + 8.13 0.000 intron (NR_148704, intron 13 of 18) HERV9N-int|LTR|ERV1 111129 NR_122106 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr2-4434 chr2 168246583 168246793 + 8.13 0.000 intron (NM_013233, intron 1 of 17) CpG 907 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr3-5956 chr3 46384755 46384965 + 8.13 0.000 intron (NR_125406, intron 2 of 3) (AGAT)n|Simple_repeat|Simple_repeat 14718 NM_001100168 1234 Hs.450802 NM_000579 ENSG00000160791 CCR5 CC-CKR-5|CCCKR5|CCR-5|CD195|CKR-5|CKR5|CMKBR5|IDDM22 C-C motif chemokine receptor 5 (gene/pseudogene) protein-coding chr3-6427 chr3 101634825 101635035 + 8.13 0.000 Intergenic HERVS71-int|LTR|ERV1 -41500 NR_024407 100009676 Hs.743292 NR_024407 ENSG00000256628 ZBTB11-AS1 - ZBTB11 antisense RNA 1 ncRNA chr16-6338 chr16 49873203 49873413 + 8.13 0.000 Intergenic L1ME3G|LINE|L1 -15389 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr22-4148 chr22 44819897 44820107 + 8.13 0.000 intron (NM_181335, intron 5 of 11) MIR3|SINE|MIR 67444 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr13-2882 chr13 111661422 111661632 + 8.13 0.000 Intergenic Intergenic 65518 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr4-2716 chr4 3861500 3861710 + 8.13 0.000 Intergenic L2|LINE|L2 93823 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr18-2112 chr18 51480251 51480461 + 8.13 0.000 intron (NR_040074, intron 1 of 2) intron (NR_040074, intron 1 of 2) 88314 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr12-6085 chr12 121455750 121455960 + 8.13 0.000 intron (NM_001005366, intron 12 of 22) intron (NM_001005366, intron 12 of 22) -11503 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr2-5776 chr2 224302915 224303125 + 8.13 0.000 Intergenic MER70A|LTR|ERVL 98974 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr6-5660 chr6 92610425 92610635 + 8.13 0.000 Intergenic L1MC|LINE|L1 809029 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr1-7302 chr1 244840517 244840727 + 8.13 0.000 intron (NM_001312872, intron 2 of 4) intron (NM_001312872, intron 2 of 4) 4964 NM_198076 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr21-1471 chr21 35292236 35292446 + 8.13 0.000 Intergenic L1MC3|LINE|L1 -243043 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr6-6907 chr6 13565282 13565492 + 8.13 0.000 Intergenic L1ME1|LINE|L1 -9142 NM_001242827 23408 Hs.567431 NM_012241 ENSG00000124523 SIRT5 SIR2L5 sirtuin 5 protein-coding chr3-5817 chr3 30426388 30426598 + 8.13 0.000 Intergenic L1MB8|LINE|L1 -92375 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chrX-2221 chrX 42703463 42703673 + 8.13 0.000 Intergenic AluJb|SINE|Alu 74595 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr13-2264 chr13 27329625 27329835 + 8.13 0.000 Intergenic Intergenic 58553 NM_001331126 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr8-3314 chr8 30170328 30170538 + 8.13 0.000 intron (NM_006571, intron 2 of 6) intron (NM_006571, intron 2 of 6) 14064 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr2-5172 chr2 30231229 30231439 + 8.13 0.000 promoter-TSS (NM_030915) promoter-TSS (NM_030915) -200 NM_030915 81606 Hs.567598 NM_030915 ENSG00000213626 LBH - LBH regulator of WNT signaling pathway protein-coding chr14-2709 chr14 90168371 90168581 + 8.13 0.000 intron (NM_022054, intron 1 of 1) intron (NM_022054, intron 1 of 1) -88077 NM_002802 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr4-2617 chr4 143241012 143241222 + 8.13 0.000 Intergenic Intergenic 56200 NM_032557 84640 Hs.480848 NM_032557 ENSG00000170185 USP38 HP43.8KD ubiquitin specific peptidase 38 protein-coding chr17-4894 chr17 70954862 70955072 + 8.13 0.000 Intergenic Intergenic 247212 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr5-2699 chr5 78964991 78965201 + 8.13 0.000 intron (NM_198709, intron 3 of 7) intron (NM_198709, intron 3 of 7) 20214 NM_000046 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr2-6561 chr2 218959499 218959709 + 8.13 0.000 promoter-TSS (NM_003936) promoter-TSS (NM_003936) -62 NM_003936 8941 Hs.158460 NM_003936 ENSG00000171450 CDK5R2 NCK5AI|P39|p39nck5ai cyclin dependent kinase 5 regulatory subunit 2 protein-coding chr3-6401 chr3 98891565 98891775 + 8.13 0.000 intron (NM_080927, intron 1 of 15) L2c|LINE|L2 10025 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr6-6520 chr6 125984268 125984478 + 8.13 0.000 Intergenic Intergenic -2057 NM_001350587 60487 Hs.404186 NM_021820 ENSG00000066651 TRMT11 C6orf75|MDS024|TRM11|TRMT11-1 tRNA methyltransferase 11 homolog protein-coding chr2-7073 chr2 169364064 169364274 + 8.13 0.000 Intergenic Intergenic -1635 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr2-14697 chr2 237797620 237797830 + 8.13 0.000 Intergenic MER96B|DNA|hAT-Tip100 -1020 NM_001080504 375316 Hs.607265 NM_198852 ENSG00000177483 RBM44 - RNA binding motif protein 44 protein-coding chr3-8483 chr3 126621317 126621527 + 8.13 0.000 intron (NM_052883, intron 12 of 15) intron (NM_052883, intron 12 of 15) 33702 NM_052883 114112 Hs.477475 NM_052883 ENSG00000197763 TXNRD3 TGR|TR2|TR2IT1|TRXR3|TXNRD3IT1|TXNRD3NB|TXNRD3NT1 thioredoxin reductase 3 protein-coding chr9-8095 chr9 98598270 98598480 + 8.13 0.000 intron (NM_005458, intron 1 of 18) intron (NM_005458, intron 1 of 18) 110560 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr20-2236 chr20 116372 116582 + 8.13 0.000 Intergenic L1PA15-16|LINE|L1 -26113 NM_030931 81623 Hs.124211 NM_030931 ENSG00000125788 DEFB126 C20orf8|DEFB-26|DEFB26|HBD26|bA530N10.1|hBD-26 defensin beta 126 protein-coding chr4-4171 chr4 9420685 9420895 + 8.13 0.000 Intergenic Intergenic -23744 NM_001040448 644414 Hs.590200 NM_001040448 ENSG00000186146 DEFB131A DEFB-31|DEFB131 defensin beta 131A protein-coding chr16-3233 chr16 85842798 85843008 + 8.13 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 43208 NM_001318802 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr11-6705 chr11 78660231 78660441 + 8.13 0.000 intron (NM_001098816, intron 33 of 33) L2c|LINE|L2 -85472 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr2-8297 chr2 104934951 104935161 + 8.13 0.000 Intergenic Intergenic -62461 NR_110373 102682016 Hs.638438 NR_110373 ENSG00000229743 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA chr11-9055 chr11 28834992 28835202 + 8.13 0.000 Intergenic Intergenic -357549 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr12-3909 chr12 126446136 126446346 + 8.13 0.000 intron (NR_147498, intron 1 of 3) intron (NR_147498, intron 1 of 3) 3086 NR_147498 283435 Hs.667334 NR_147498 LINC02825 - long intergenic non-protein coding RNA 2825 ncRNA chr18-1429 chr18 12470262 12470472 + 8.13 0.000 intron (NM_020148, intron 9 of 15) intron (NM_020148, intron 9 of 15) 37593 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chr2-14546 chr2 230579180 230579390 + 8.13 0.000 Intergenic Intergenic 121244 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr8-2975 chr8 81026491 81026701 + 8.13 0.000 intron (NM_018440, intron 3 of 8) intron (NM_018440, intron 3 of 8) 85472 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr1-7010 chr1 169511606 169511816 + 8.13 0.000 TTS (NM_000130) TTS (NM_000130) -25741 NM_001319667 10560 Hs.30246 NM_006996 ENSG00000117479 SLC19A2 TC1|THMD1|THT1|THTR1|TRMA solute carrier family 19 member 2 protein-coding chr4-5467 chr4 54100017 54100227 + 8.13 0.000 promoter-TSS (NM_133267) promoter-TSS (NM_133267) -41 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr12-3312 chr12 80676096 80676306 + 8.13 0.000 intron (NM_001145026, intron 43 of 44) intron (NM_001145026, intron 43 of 44) -31433 NM_002469 4618 Hs.35937 NM_002469 ENSG00000111046 MYF6 CNM3|MRF4|bHLHc4|myf-6 myogenic factor 6 protein-coding chr16-4318 chr16 29665919 29666129 + 8.13 0.000 3' UTR (NM_003123, exon 2 of 2) 3' UTR (NM_003123, exon 2 of 2) 2777 NM_003123 6693 Hs.632188 NM_003123 ENSG00000197471 SPN CD43|GALGP|GPL115|LSN sialophorin protein-coding chr1-7364 chr1 20148537 20148747 + 8.13 0.000 3' UTR (NM_001360869, exon 5 of 5) 3' UTR (NM_001360869, exon 5 of 5) 9319 NM_022819 64600 Hs.302034 NM_022819 ENSG00000158786 PLA2G2F GIIFsPLA2|sPLA2-IIF phospholipase A2 group IIF protein-coding chr10-6815 chr10 16308924 16309134 + 8.13 0.000 Intergenic Intergenic -127914 NM_001261836 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr7-9128 chr7 108186969 108187179 + 8.13 0.000 intron (NR_163870, intron 18 of 27) MER119|DNA|hAT-Charlie 56311 NM_001371182 chr20-3101 chr20 25756907 25757117 + 8.13 0.000 TTS (NR_135006) TTS (NR_135006) 5804 NR_135006 105372582 Hs.516951 NR_135006 LOC105372582 - uncharacterized LOC105372582 ncRNA chr6-6723 chr6 1535457 1535667 + 8.13 0.000 Intergenic Intergenic -69969 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript ncRNA chr11-10050 chr11 83813495 83813705 + 8.13 0.000 intron (NM_001142699, intron 17 of 27) MIRb|SINE|MIR -131175 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr16-5810 chr16 212365 212575 + 8.13 0.000 intron (NM_001330420, intron 3 of 9) MIR|SINE|MIR 16979 NM_018032 55692 Hs.16803 NM_018032 ENSG00000007392 LUC7L LUC7B1|Luc7|SR+89|hLuc7B1 LUC7 like protein-coding chr3-11030 chr3 182496363 182496573 + 8.13 0.000 Intergenic Intergenic -10106 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr3-8537 chr3 143097608 143097818 + 8.13 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -22058 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr12-5727 chr12 123265436 123265646 + 8.13 0.000 intron (NM_001270434, intron 2 of 3) intron (NM_001270434, intron 2 of 3) 2713 NM_001270434 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr7-5309 chr7 25482360 25482570 + 8.13 0.000 Intergenic MLT2B2|LTR|ERVL 180675 NR_157828 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr22-2936 chr22 47389036 47389246 + 8.13 0.000 Intergenic Intergenic 43570 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chrX-1733 chrX 38005689 38005899 + 8.13 0.000 promoter-TSS (NM_138780) promoter-TSS (NM_138780) -759 NM_001163335 94122 Hs.662334 NM_138780 ENSG00000147041 SYTL5 slp5 synaptotagmin like 5 protein-coding chr6-7129 chr6 35723895 35724105 + 8.13 0.000 intron (NM_001145775, intron 1 of 11) MIR|SINE|MIR 4583 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr13-2019 chr13 39461820 39462030 + 8.13 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 141268 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr10-2822 chr10 18610620 18610830 + 8.13 0.000 intron (NM_182543, intron 5 of 10) intron (NM_182543, intron 5 of 10) 40862 NM_182543 221078 Hs.396175 NM_182543 ENSG00000241058 NSUN6 4933414E04Rik|ARL5B-AS1|NOPD1 NOP2/Sun RNA methyltransferase 6 protein-coding chr3-6910 chr3 157135938 157136148 + 8.13 0.000 Intergenic Intergenic -13041 NR_034007 339894 Hs.478050 NR_034007 ENSG00000243629 LINC00880 - long intergenic non-protein coding RNA 880 ncRNA chr9-5421 chr9 96173791 96174001 + 8.13 0.000 Intergenic Intergenic -57485 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr2-5082 chr2 10599207 10599417 + 8.13 0.000 intron (NR_048552, intron 16 of 19) Tigger19a|DNA|TcMar-Tigger 90663 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr1-10964 chr1 213855539 213855749 + 8.13 0.000 intron (NR_037850, intron 4 of 5) intron (NR_037850, intron 4 of 5) -69105 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr3-5078 chr3 45218856 45219066 + 8.13 0.000 Intergenic Intergenic 7326 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr12-5369 chr12 119536085 119536295 + 8.13 0.000 intron (NM_178499, intron 13 of 13) L1PA7|LINE|L1 -57584 NM_001136534 387890 Hs.530965 NM_001136534 ENSG00000224982 TMEM233 DSPB2|IFITMD2 transmembrane protein 233 protein-coding chr20-4544 chr20 64071867 64072077 + 8.13 0.000 intron (NM_198723, intron 10 of 10) intron (NM_198723, intron 10 of 10) 5038 NR_106871 102466741 NR_106871 ENSG00000274034 MIR6813 hsa-mir-6813 microRNA 6813 ncRNA chr2-11599 chr2 2338565 2338775 + 8.13 0.000 Intergenic Intergenic -7395 NM_001329851 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr12-5816 chr12 25387502 25387712 + 8.13 0.000 Intergenic Intergenic -136678 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr15-3605 chr15 64067438 64067648 + 8.13 0.000 Intergenic Intergenic -21058 NM_014326 23604 Hs.237886 NM_014326 ENSG00000035664 DAPK2 DRP-1|DRP1 death associated protein kinase 2 protein-coding chr20-4396 chr20 58393383 58393593 + 8.13 0.000 intron (NR_036633, intron 1 of 3) intron (NR_036633, intron 1 of 3) 4259 NM_001195677 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr5-5949 chr5 91541010 91541220 + 8.13 0.000 Intergenic Intergenic -157798 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr13-2071 chr13 63110566 63110776 + 8.13 0.000 Intergenic Intergenic 217423 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr11-5032 chr11 85158698 85158908 + 8.13 0.000 intron (NM_001142699, intron 4 of 27) HERVL-int|LTR|ERVL -235382 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr17-5028 chr17 1507748 1507958 + 8.13 0.000 intron (NM_001135642, intron 8 of 13) intron (NM_001135642, intron 8 of 13) 8759 NM_001135642 51763 Hs.632238 NM_016532 ENSG00000132376 INPP5K MDCCAID|PPS|SKIP inositol polyphosphate-5-phosphatase K protein-coding chr14-4414 chr14 31131419 31131629 + 8.13 0.000 intron (NM_015382, intron 24 of 42) intron (NM_015382, intron 24 of 42) 76269 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr3-7895 chr3 130146280 130146490 + 8.13 0.000 Intergenic HERVE-int|LTR|ERV1 33835 NR_146654 105374104 Hs.587226 NR_146653 ENSG00000249846 LINC02021 - long intergenic non-protein coding RNA 2021 ncRNA chr16-5507 chr16 14399966 14400176 + 8.13 0.000 Intergenic Intergenic -29805 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr5-7278 chr5 14097894 14098104 + 8.13 0.000 Intergenic L1MB7|LINE|L1 -45343 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr15-5284 chr15 100682361 100682571 + 8.13 0.000 Intergenic Intergenic 79877 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 - ankyrin repeat and SOCS box containing 7 protein-coding chr14-4466 chr14 34483340 34483550 + 8.13 0.000 Intergenic Intergenic -21205 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr13-1053 chr13 113298081 113298291 + 8.13 0.000 intron (NM_005561, intron 1 of 8) intron (NM_005561, intron 1 of 8) 947 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr2-8968 chr2 190010091 190010301 + 8.13 0.000 Intergenic L2a|LINE|L2 52533 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr7-5425 chr7 36033825 36034035 + 8.13 0.000 Intergenic Intergenic -61380 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr7-8794 chr7 82247898 82248108 + 8.13 0.000 intron (NM_000722, intron 3 of 38) intron (NM_000722, intron 3 of 38) 195774 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr1-9130 chr1 18595388 18595598 + 8.13 0.000 Intergenic Intergenic -35353 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr22-1450 chr22 46661685 46661895 + 8.13 0.000 intron (NM_015124, intron 5 of 18) intron (NM_015124, intron 5 of 18) 41404 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr1-8159 chr1 16139212 16139422 + 8.13 0.000 intron (NM_004431, intron 3 of 16) intron (NM_004431, intron 3 of 16) 16752 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr13-2240 chr13 25155976 25156186 + 8.13 0.000 Intergenic Charlie17b|DNA|hAT-Charlie 16086 NM_199138 219287 Hs.528335 NM_152704 ENSG00000165566 AMER2 FAM123A APC membrane recruitment protein 2 protein-coding chr19-4253 chr19 55473660 55473870 + 8.13 0.000 Intergenic Intergenic -2852 NM_033113 89887 Hs.525209 NM_033113 ENSG00000197483 ZNF628 ZEC|Zfp628 zinc finger protein 628 protein-coding chrX-2211 chrX 41593902 41594112 + 8.13 0.000 intron (NM_003688, intron 12 of 26) intron (NM_003688, intron 12 of 26) -94966 NM_005300 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr3-9754 chr3 69501906 69502116 + 8.13 0.000 Intergenic L1PA5|LINE|L1 -115923 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr12-7514 chr12 68696400 68696610 + 8.13 0.000 intron (NM_020401, intron 5 of 27) AluSq2|SINE|Alu 9527 NM_020401 57122 Hs.524574 NM_020401 ENSG00000111581 NUP107 NPHS11|NUP84|ODG6|ODG6; GAMOS7 nucleoporin 107 protein-coding chr19-4953 chr19 45064151 45064361 + 8.13 0.000 intron (NR_103529, intron 12 of 20) CpG-14671 -11371 NM_001319055 79760 Hs.466919 NM_024707 ENSG00000142252 GEMIN7 SIP3 gem nuclear organelle associated protein 7 protein-coding chr11-7657 chr11 64568560 64568770 + 8.13 0.000 intron (NM_018484, intron 7 of 9) intron (NM_018484, intron 7 of 9) 12724 NM_001307985 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr4-4350 chr4 38331496 38331706 + 8.13 0.000 Intergenic Intergenic -35313 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr1-12425 chr1 11474378 11474588 + 8.13 0.000 Intergenic MIRb|SINE|MIR -4672 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr10-9145 chr10 128069749 128069959 + 8.13 0.000 intron (NM_001323354, intron 12 of 19) intron (NM_001323354, intron 12 of 19) -7429 NR_136150 105378553 NR_136149 AS-PTPRE - lncRNA antisense to PTPRE protein-coding gene ncRNA chr2-12885 chr2 98484217 98484427 + 8.13 0.000 intron (NM_001351428, intron 1 of 24) intron (NM_001351428, intron 1 of 24) 38312 NM_001351428 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr3-4235 chr3 140073254 140073464 + 8.13 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 138174 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr2-13206 chr2 122041750 122041960 + 8.13 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 286204 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr13-4435 chr13 111408299 111408509 + 8.13 0.000 Intergenic AluSz|SINE|Alu 87762 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr4-4460 chr4 54585796 54586006 + 8.13 0.000 Intergenic MIRb|SINE|MIR 21230 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr19-1839 chr19 8364095 8364305 + 8.13 0.000 promoter-TSS (NM_001039667) promoter-TSS (NM_001039667) 45 NM_139314 51129 Hs.9613 NM_016109 ENSG00000167772 ANGPTL4 ARP4|FIAF|HARP|HFARP|NL2|PGAR|TGQTL|UNQ171|pp1158 angiopoietin like 4 protein-coding chr13-2220 chr13 24169178 24169388 + 8.13 0.000 intron (NM_153023, intron 1 of 11) intron (NM_153023, intron 1 of 11) 6867 NR_031753 100313842 NR_031753 ENSG00000252695 MIR2276 - microRNA 2276 ncRNA chr1-5930 chr1 22232857 22233067 + 8.13 0.000 Intergenic Intergenic -33277 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr13-2516 chr13 59843551 59843761 + 8.13 0.000 intron (NM_001258369, intron 22 of 26) intron (NM_001258369, intron 22 of 26) -169062 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr7-6727 chr7 4917636 4917846 + 8.13 0.000 intron (NR_072989, intron 3 of 8) intron (NR_072989, intron 3 of 8) -34025 NM_018059 55698 Hs.667336 NM_018059 ENSG00000157927 RADIL RASIP2 Rap associating with DIL domain protein-coding chr6-8281 chr6 142375161 142375371 + 8.13 0.000 intron (NM_198569, intron 4 of 24) intron (NM_198569, intron 4 of 24) 73259 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr8-4352 chr8 100986601 100986811 + 8.13 0.000 Intergenic Intergenic -33324 NM_003406 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr2-6729 chr2 30864767 30864977 + 8.13 0.000 Intergenic MER3|DNA|hAT-Charlie -57426 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr15-2571 chr15 56448065 56448275 + 8.13 0.000 intron (NM_018365, intron 3 of 9) L1ME1|LINE|L1 16967 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr7-3522 chr7 6097001 6097211 + 8.13 0.000 Intergenic HERV16-int|LTR|ERVL -7843 NM_032172 84132 Hs.31856 NM_032172 ENSG00000106346 USP42 - ubiquitin specific peptidase 42 protein-coding chr1-10678 chr1 186065845 186066055 + 8.13 0.000 intron (NM_031935, intron 49 of 106) intron (NM_031935, intron 49 of 106) -230323 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr12-2182 chr12 3252335 3252545 + 8.13 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 113682 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr1-11917 chr1 54774809 54775019 + 8.13 0.000 Intergenic LTR16C|LTR|ERVL -10391 NM_152268 25973 Hs.380169 NM_152268 ENSG00000162396 PARS2 EIEE75|MT-PRORS|proRS prolyl-tRNA synthetase 2, mitochondrial protein-coding chr1-8842 chr1 3251546 3251756 + 8.13 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 123676 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr10-4308 chr10 15047002 15047212 + 8.13 0.000 intron (NM_018324, intron 1 of 8) (TTCTCC)n|Simple_repeat|Simple_repeat 3164 NM_018324 55301 Hs.24309 NM_018324 ENSG00000152463 OLAH AURA1|SAST|TE2|THEDC1 oleoyl-ACP hydrolase protein-coding chr5-4700 chr5 40096300 40096510 + 8.13 0.000 Intergenic Intergenic 44114 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr14-4920 chr14 73728686 73728896 + 8.13 0.000 intron (NM_001367710, intron 4 of 12) intron (NM_001367710, intron 4 of 12) -14407 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding chr18-861 chr18 33491977 33492187 + 8.13 0.000 Intergenic Intergenic -51042 NM_001371120 chr5-1738 chr5 168269309 168269519 + 8.13 0.000 Intergenic Intergenic -22231 NM_015238 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr1-5920 chr1 17145646 17145856 + 8.13 0.000 Intergenic L2a|LINE|L2 -26300 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr22-3151 chr22 26235512 26235722 + 8.13 0.000 intron (NM_001184776, intron 1 of 14) L2b|LINE|L2 66143 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr20-1799 chr20 62325657 62325867 + 8.13 0.000 intron (NM_005560, intron 40 of 79) L1M5|LINE|L1 6795 NR_039915 100616340 NR_039915 ENSG00000284074 MIR4758 - microRNA 4758 ncRNA chr1-16442 chr1 226880517 226880727 + 8.13 0.000 intron (NM_000447, intron 3 of 12) intron (NM_000447, intron 3 of 12) 10006 NM_000447 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr14-5163 chr14 91386658 91386868 + 8.13 0.000 intron (NM_001080414, intron 3 of 29) intron (NM_001080414, intron 3 of 29) 31057 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr9-5607 chr9 116166612 116166822 + 8.13 0.000 intron (NM_002581, intron 1 of 21) intron (NM_002581, intron 1 of 21) 12926 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr9-7487 chr9 29543251 29543461 + 8.13 0.000 Intergenic L1MC2|LINE|L1 -329755 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr5-5421 chr5 136511797 136512007 + 8.13 0.000 Intergenic Intergenic -146426 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr16-6808 chr16 80052488 80052698 + 8.13 0.000 Intergenic L1PB1|LINE|L1 257344 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr2-9092 chr2 204089537 204089747 + 8.13 0.000 Intergenic MIR3|SINE|MIR 152894 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr3-7472 chr3 139295488 139295698 + 8.13 0.000 Intergenic Intergenic -48401 NM_020191 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr2-9331 chr2 225251649 225251859 + 8.13 0.000 Intergenic ERVL-E-int|LTR|ERVL -147956 NM_001371273 chr14-1865 chr14 74374581 74374791 + 8.13 0.000 Intergenic Tigger3|DNA|TcMar-Tigger 26215 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr17-4767 chr17 44178429 44178639 + 8.13 0.000 3' UTR (NM_080863, exon 5 of 5) 3' UTR (NM_080863, exon 5 of 5) 7830 NM_080863 92591 Hs.534517 NM_080863 ENSG00000161664 ASB16 - ankyrin repeat and SOCS box containing 16 protein-coding chr15-3152 chr15 67406276 67406486 + 8.13 0.000 non-coding (NR_040051, exon 6 of 6) non-coding (NR_040051, exon 6 of 6) 114592 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr1-9654 chr1 47785984 47786194 + 8.13 0.000 intron (NM_001194986, intron 4 of 6) intron (NM_001194986, intron 4 of 6) 211296 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr2-11372 chr2 210104882 210105092 + 8.13 0.000 intron (NM_001307976, intron 3 of 13) intron (NM_001307976, intron 3 of 13) 66422 NM_001307976 151050 Hs.282260 NM_152519 ENSG00000144445 KANSL1L C2orf67|MSL1v2 KAT8 regulatory NSL complex subunit 1 like protein-coding chr1-15539 chr1 157486897 157487107 + 8.13 0.000 Intergenic MamRep137|DNA|TcMar-Tigger 65513 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr3-10494 chr3 135648368 135648578 + 8.13 0.000 Intergenic L1PA13|LINE|L1 -317255 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chrX-3313 chrX 118589845 118590055 + 8.13 0.000 intron (NM_144658, intron 18 of 52) intron (NM_144658, intron 18 of 52) 94041 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chrX-1718 chrX 23717511 23717721 + 8.13 0.000 intron (NM_001037171, intron 8 of 15) intron (NM_001037171, intron 8 of 15) 25660 NM_001330259 23597 Hs.298885 NM_001033583 ENSG00000123130 ACOT9 ACATE2|CGI-16|MT-ACT48|MTACT48 acyl-CoA thioesterase 9 protein-coding chr20-4413 chr20 59525636 59525846 + 8.13 0.000 Intergenic Intergenic -51768 NM_001199505 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr4-4841 chr4 109730501 109730711 + 8.13 0.000 promoter-TSS (NM_030821) promoter-TSS (NM_030821) -536 NM_030821 81579 Hs.389452 NM_030821 ENSG00000123739 PLA2G12A GXII|PLA2G12|ROSSY phospholipase A2 group XIIA protein-coding chr15-2041 chr15 52699641 52699851 + 8.13 0.000 Intergenic Intergenic -21112 NR_104457 56204 Hs.152385 NM_019600 ENSG00000047346 FAM214A KIAA1370 family with sequence similarity 214 member A protein-coding chr3-8588 chr3 158300734 158300944 + 8.13 0.000 intron (NM_001271838, intron 5 of 9) intron (NM_001271838, intron 5 of 9) 190750 NM_001271838 51319 Hs.591283 NM_016625 ENSG00000174891 RSRC1 BM-011|MRT70|SFRS21|SRrp53 arginine and serine rich coiled-coil 1 protein-coding chr7-8830 chr7 85733276 85733486 + 8.13 0.000 Intergenic Intergenic 312259 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr19-6143 chr19 4176457 4176667 + 8.13 0.000 intron (NM_001321060, intron 4 of 7) AluSx4|SINE|Alu 5744 NM_001321064 51548 Hs.423756 NM_016539 ENSG00000077463 SIRT6 SIR2L6 sirtuin 6 protein-coding chr3-4447 chr3 32976463 32976673 + 8.13 0.000 Intergenic Intergenic 24924 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr14-3084 chr14 63854213 63854423 + 8.13 0.000 intron (NM_015180, intron 1 of 114) intron (NM_015180, intron 1 of 114) 1314 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr1-11503 chr1 151114429 151114639 + 8.13 0.000 intron (NM_001323912, intron 6 of 7) AluSc|SINE|Alu 32097 NM_001178062 10500 Hs.516316 NM_030913 ENSG00000143434 SEMA6C SEMAY|m-SemaY|m-SemaY2 semaphorin 6C protein-coding chr10-5779 chr10 104395982 104396192 + 8.13 0.000 intron (NM_001008723, intron 11 of 17) intron (NM_001008723, intron 11 of 17) 42254 NM_001008723 159686 Hs.253576 NM_001008723 ENSG00000120051 CFAP58 C10orf80|CCDC147|bA127L20.4|bA127L20.5|bA554P13.1 cilia and flagella associated protein 58 protein-coding chr11-10497 chr11 118668013 118668223 + 8.13 0.000 intron (NM_007180, intron 1 of 14) AluSx|SINE|Alu 11532 NM_001301065 11181 Hs.129712 NM_007180 ENSG00000118094 TREH TRE|TREA|TREHD trehalase protein-coding chr4-2398 chr4 75916630 75916840 + 8.13 0.000 3' UTR (NM_001363719, exon 9 of 9) 3' UTR (NM_001363719, exon 9 of 9) -14283 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr10-3699 chr10 107007951 107008161 + 8.13 0.000 intron (NM_001206569, intron 1 of 25) intron (NM_001206569, intron 1 of 25) 156650 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr10-8124 chr10 69761675 69761885 + 8.13 0.000 Intergenic MIRc|SINE|MIR -40126 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr7-9346 chr7 129165087 129165297 + 8.13 0.000 intron (NM_178562, intron 5 of 7) L1MB4|LINE|L1 20485 NM_178562 340348 Hs.27267 NM_178562 ENSG00000158457 TSPAN33 PEN|PEN.|TSPAN-33 tetraspanin 33 protein-coding chr1-7860 chr1 94079082 94079292 + 8.13 0.000 intron (NM_000350, intron 9 of 49) intron (NM_000350, intron 9 of 49) 41961 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr1-11403 chr1 53195889 53196099 + 8.13 0.000 promoter-TSS (NM_001330589) promoter-TSS (NM_001330589) -830 NM_000098 1376 Hs.713535 NM_000098 ENSG00000157184 CPT2 CPT1|CPTASE|IIAE4 carnitine palmitoyltransferase 2 protein-coding chr11-5473 chr11 75797883 75798093 + 8.13 0.000 intron (NM_032564, intron 6 of 7) intron (NM_032564, intron 6 of 7) 16809 NR_144531 100506113 Hs.720913 NR_144531 ENSG00000255507 UVRAG-DT - UVRAG divergent transcript ncRNA chr6-6070 chr6 139841993 139842203 + 8.13 0.000 intron (NR_038399, intron 1 of 2) MIR|SINE|MIR -12752 NR_138541 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr14-3673 chr14 96661417 96661627 + 8.13 0.000 Intergenic Intergenic -79669 NR_146552 105370646 NR_146552 ENSG00000258979 LINC02299 - long intergenic non-protein coding RNA 2299 ncRNA chr10-8826 chr10 109701387 109701597 + 8.13 0.000 Intergenic Intergenic 221754 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr6-3015 chr6 46808848 46809058 + 8.13 0.000 intron (NM_005588, intron 5 of 13) MamGypLTR1c|LTR|Gypsy 15564 NM_005588 4224 Hs.179704 NM_005588 ENSG00000112818 MEP1A PPHA meprin A subunit alpha protein-coding chr20-3158 chr20 39419815 39420025 + 8.13 0.000 Intergenic L2|LINE|L2 -195172 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr16-4939 chr16 137970 138180 + 8.13 0.000 intron (NM_001039476, intron 1 of 10) CpG 598 NM_001077350 8131 Hs.19699 NM_012075 ENSG00000103148 NPRL3 C16orf35|CGTHBA|FFEVF3|HS-40|MARE|NPR3|RMD11 NPR3 like, GATOR1 complex subunit protein-coding chr5-6841 chr5 115690473 115690683 + 8.13 0.000 Intergenic SVA_D|Retroposon|SVA -17926 NR_104674 102467217 Hs.147738 NR_104674 LOC102467217 - uncharacterized LOC102467217 ncRNA chr12-5997 chr12 99266979 99267189 + 8.13 0.000 intron (NM_152788, intron 12 of 25) intron (NM_152788, intron 12 of 25) -111994 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr10-8402 chr10 84057553 84057763 + 8.13 0.000 Intergenic Intergenic -81851 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr10-4370 chr10 35425640 35425850 + 8.13 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 88871 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr11-5827 chr11 8233927 8234137 + 8.13 0.000 intron (NM_001270428, intron 1 of 3) intron (NM_001270428, intron 1 of 3) 29846 NR_073006 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr17-3033 chr17 78390444 78390654 + 8.13 0.000 intron (NR_111989, intron 1 of 8) intron (NR_111989, intron 1 of 8) 11900 NR_110601 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr10-5104 chr10 48435742 48435952 + 8.13 0.000 non-coding (NR_136585, exon 12 of 12) non-coding (NR_136585, exon 12 of 12) 34235 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr16-3709 chr16 2649660 2649870 + 8.13 0.000 Intergenic Intergenic 10783 NR_024492 645644 Hs.597810 NR_024492 FLJ42627 - uncharacterized LOC645644 ncRNA chr10-3019 chr10 102668537 102668747 + 8.13 0.000 Intergenic Intergenic 24147 NR_144321 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr17-4511 chr17 74893034 74893244 + 8.13 0.000 intron (NM_178128, intron 1 of 5) intron (NM_178128, intron 1 of 5) 494 NM_178128 283985 Hs.448845 NM_178128 ENSG00000172782 FADS6 FP18279 fatty acid desaturase 6 protein-coding chr10-3211 chr10 101337098 101337308 + 8.13 0.000 Intergenic AluSx1|SINE|Alu -16830 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr2-13604 chr2 158742280 158742490 + 8.13 0.000 Intergenic AluSx1|SINE|Alu -7383 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr22-2626 chr22 32817133 32817343 + 8.13 0.000 intron (NM_000362, intron 1 of 4) MER103C|DNA|hAT-Charlie 16422 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr5-8472 chr5 132203450 132203660 + 8.13 0.000 intron (NM_001365681, intron 9 of 13) L2b|LINE|L2 14363 NR_106888 102465498 NR_106888 ENSG00000283678 MIR6830 hsa-mir-6830 microRNA 6830 ncRNA chrX-1477 chrX 122851127 122851337 + 8.13 0.000 Intergenic MER76|LTR|ERVL -333011 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr6-3228 chr6 142413630 142413840 + 8.13 0.000 intron (NM_198569, intron 18 of 24) intron (NM_198569, intron 18 of 24) 111728 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr4-7580 chr4 79859463 79859673 + 8.13 0.000 intron (NR_026555, intron 1 of 1) L2a|LINE|L2 32097 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr15-5066 chr15 85707158 85707368 + 8.13 0.000 intron (NM_007200, intron 17 of 36) intron (NM_007200, intron 17 of 36) 51462 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr3-10601 chr3 143973678 143973888 + 8.13 0.000 intron (NM_001134470, intron 1 of 2) intron (NM_001134470, intron 1 of 2) 702 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr2-5619 chr2 188345418 188345628 + 8.13 0.000 intron (NR_045563, intron 2 of 12) L2|LINE|L2 48031 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr12-3466 chr12 120206953 120207163 + 8.13 0.000 intron (NR_038924, intron 2 of 3) AluSx1|SINE|Alu 5767 NR_038924 100506649 Hs.569205 NR_038924 ENSG00000255857 PXN-AS1 EyeLinc4 PXN antisense RNA 1 ncRNA chr5-2878 chr5 92560692 92560902 + 8.13 0.000 Intergenic Intergenic 1010546 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr4-8342 chr4 146985054 146985264 + 8.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -39273 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr5-3899 chr5 153355086 153355296 + 8.13 0.000 Intergenic Intergenic -135333 NM_001258020 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chrX-1739 chrX 40801337 40801547 + 8.13 0.000 Intergenic MER52-int|LTR|ERV1 31754 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo chr4-8302 chr4 143570221 143570431 + 8.13 0.000 Intergenic Intergenic 10854 NR_003675 441046 Hs.135705 NM_001011539 ENSG00000236296 GUSBP5 GYPELOC441046 GUSB pseudogene 5 pseudo chr16-5994 chr16 6154285 6154495 + 8.13 0.000 intron (NM_018723, intron 1 of 15) intron (NM_018723, intron 1 of 15) 134687 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr12-2748 chr12 42588717 42588927 + 8.13 0.000 intron (NM_153026, intron 1 of 7) intron (NM_153026, intron 1 of 7) 924 NM_153026 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr4-1906 chr4 34108545 34108755 + 8.13 0.000 Intergenic MamRTE1|LINE|RTE-BovB -68757 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr17-4186 chr17 13587739 13587949 + 8.13 0.000 intron (NM_006042, intron 1 of 1) intron (NM_006042, intron 1 of 1) 14085 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr2-7269 chr2 234323808 234324018 + 8.13 0.000 Intergenic Intergenic 130682 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr12-7492 chr12 67123163 67123373 + 8.13 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -26984 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr15-2304 chr15 72302041 72302251 + 8.13 0.000 intron (NM_052840, intron 3 of 12) intron (NM_052840, intron 3 of 12) 4169 NM_001172685 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr16-4669 chr16 77443763 77443973 + 8.13 0.000 Intergenic Intergenic -8834 NM_001326358 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr14-2393 chr14 52283200 52283410 + 8.13 0.000 Intergenic PRIMA4-int|LTR|ERV1 15607 NM_001281469 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chrX-1528 chrX 27680738 27680948 + 8.13 0.000 intron (NM_001353450, intron 3 of 4) intron (NM_001353450, intron 3 of 4) 90499 NR_148432 347442 Hs.720885 NM_001136533 ENSG00000189186 DCAF8L2 WDR42C DDB1 and CUL4 associated factor 8 like 2 protein-coding chr8-6608 chr8 74055895 74056105 + 8.13 0.000 Intergenic Intergenic 64608 NM_015364 23643 Hs.726603 NM_015364 ENSG00000154589 LY96 ESOP-1|MD-2|MD2|ly-96 lymphocyte antigen 96 protein-coding chr5-4950 chr5 76607784 76607994 + 8.13 0.000 non-coding (NR_134278, exon 2 of 2) non-coding (NR_134278, exon 2 of 2) 1080 NR_134278 101929109 Hs.665172 NR_134278 ENSG00000249713 LOC101929109 - uncharacterized LOC101929109 ncRNA chr12-8030 chr12 113737807 113738017 + 8.13 0.000 Intergenic Intergenic 35771 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr11-6281 chr11 59754151 59754361 + 8.13 0.000 Intergenic Intergenic -1120 NM_004177 6809 Hs.180711 NM_004177 ENSG00000166900 STX3 STX3A syntaxin 3 protein-coding chr4-5239 chr4 169315561 169315771 + 8.13 0.000 Intergenic Intergenic -44710 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr12-2383 chr12 26126003 26126213 + 8.13 0.000 Intergenic CpG -1071 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr2-8695 chr2 151991684 151991894 + 8.13 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) -17811 NM_001330117 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr2-9834 chr2 157612433 157612643 + 8.13 0.000 intron (NM_145259, intron 1 of 8) L1MA4A|LINE|L1 -14978 NM_001111031 130399 Hs.562901 NM_145259 ENSG00000123612 ACVR1C ACVRLK7|ALK7 activin A receptor type 1C protein-coding chr3-9851 chr3 79534919 79535129 + 8.13 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) 27137 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA chr10-6882 chr10 32805627 32805837 + 8.13 0.000 intron (NM_001321115, intron 31 of 43) L1M4b|LINE|L1 95740 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr18-1298 chr18 64019411 64019621 + 8.13 0.000 3' UTR (NM_001348367, exon 8 of 8) 3' UTR (NM_001348367, exon 8 of 8) 49435 NM_001031848 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr6-8511 chr6 158995469 158995679 + 8.13 0.000 intron (NM_001346418, intron 1 of 5) MLT1D|LTR|ERVL-MaLR 4613 NR_144434 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke head 3 protein-coding chr3-10899 chr3 171212748 171212958 + 8.13 0.000 intron (NM_001161563, intron 3 of 31) intron (NM_001161563, intron 3 of 31) -106094 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr12-8038 chr12 114087482 114087692 + 8.13 0.000 Intergenic Intergenic -121262 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr4-3614 chr4 8002180 8002390 + 8.13 0.000 intron (NM_001130084, intron 15 of 19) intron (NM_001130084, intron 15 of 19) 3096 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr17-7981 chr17 48384605 48384815 + 8.13 0.000 intron (NM_001075099, intron 2 of 12) intron (NM_001075099, intron 2 of 12) 45504 NM_003726 8631 Hs.316931 NM_003726 ENSG00000141293 SKAP1 HEL-S-81p|SCAP1|SKAP55 src kinase associated phosphoprotein 1 protein-coding chr6-6033 chr6 119846477 119846687 + 8.13 0.000 Intergenic Intergenic -168597 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr2-8649 chr2 146898102 146898312 + 8.13 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 311150 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr8-4853 chr8 39483811 39484021 + 8.13 0.000 intron (NR_073423, intron 12 of 21) PRIMA4-int|LTR|ERV1 39073 NR_024106 1587 Hs.98848 NR_001569 ENSG00000197475 ADAM3A ADAM3|CYRN1|tMDCI ADAM metallopeptidase domain 3A (pseudogene) pseudo chr15-5140 chr15 90603990 90604200 + 8.13 0.000 intron (NM_001042574, intron 4 of 14) intron (NM_001042574, intron 4 of 14) -56139 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr4-8073 chr4 122673687 122673897 + 8.13 0.000 intron (NR_104126, intron 10 of 10) intron (NR_104126, intron 10 of 10) -52726 NM_021803 59067 Hs.567559 NM_021803 ENSG00000138684 IL21 CVID11|IL-21|Za11 interleukin 21 protein-coding chr6-6625 chr6 151106776 151106986 + 8.13 0.000 Intergenic Intergenic 4206 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr1-15030 chr1 93576027 93576237 + 8.13 0.000 intron (NM_001308251, intron 3 of 7) intron (NM_001308251, intron 3 of 7) 9030 NM_001308251 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr14-3066 chr14 61706738 61706948 + 8.13 0.000 intron (NM_001243084, intron 1 of 14) intron (NM_001243084, intron 1 of 14) 9221 NM_001243084 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr2-13833 chr2 176405655 176405865 + 8.13 0.000 Intergenic Intergenic 136318 NM_001006635 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr8-3269 chr8 16605735 16605945 + 8.13 0.000 Intergenic MLT2B1|LTR|ERVL 396505 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr11-4431 chr11 94315809 94316019 + 8.13 0.000 Intergenic Intergenic 10277 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr7-8813 chr7 83411061 83411271 + 8.13 0.000 intron (NM_001178129, intron 5 of 16) intron (NM_001178129, intron 5 of 16) 230265 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr20-4498 chr20 63207059 63207269 + 8.13 0.000 intron (NM_017798, intron 3 of 4) intron (NM_017798, intron 3 of 4) 8967 NM_017798 54915 Hs.744852 NM_017798 ENSG00000149658 YTHDF1 C20orf21 YTH N6-methyladenosine RNA binding protein 1 protein-coding chr15-3650 chr15 89794984 89795194 + 8.13 0.000 intron (NM_001150, intron 15 of 20) HAL1|LINE|L1 18757 NM_001039958 145873 Hs.37311 NM_001039958 ENSG00000188095 MESP2 SCDO2|bHLHc6 mesoderm posterior bHLH transcription factor 2 protein-coding chr11-7531 chr11 11758870 11759080 + 8.13 0.000 Intergenic Intergenic 24247 NR_107037 102465870 NR_107037 ENSG00000278529 MIR8070 hsa-mir-8070 microRNA 8070 ncRNA chr17-8115 chr17 57526393 57526603 + 8.13 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) -2901 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr5-8253 chr5 111537196 111537406 + 8.13 0.000 intron (NR_040093, intron 1 of 6) intron (NR_040093, intron 1 of 6) -24704 NR_131752 134429 Hs.93842 NM_139164 ENSG00000164211 STARD4 - StAR related lipid transfer domain containing 4 protein-coding chr11-5168 chr11 3951372 3951582 + 8.13 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 95415 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr15-2687 chr15 79849907 79850117 + 8.13 0.000 intron (NR_037654, intron 2 of 2) MIR|SINE|MIR 46985 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr7-7588 chr7 127886063 127886273 + 8.13 0.000 intron (NM_014390, intron 12 of 23) intron (NM_014390, intron 12 of 23) -111341 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr15-2554 chr15 50388216 50388426 + 8.13 0.000 Intergenic AluJb|SINE|Alu 27992 NR_039862 100616396 NR_039862 ENSG00000284284 MIR4712 - microRNA 4712 ncRNA chr9-8094 chr9 98538841 98539051 + 8.13 0.000 intron (NM_005458, intron 3 of 18) intron (NM_005458, intron 3 of 18) 169989 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr3-7820 chr3 102325244 102325454 + 8.13 0.000 Intergenic MER5A|DNA|hAT-Charlie -109666 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr7-3836 chr7 99927304 99927514 + 8.13 0.000 intron (NM_181538, intron 1 of 1) intron (NM_181538, intron 1 of 1) 2211 NM_181538 349149 Hs.647524 NM_181538 ENSG00000176402 GJC3 CX29|CX30.2|CX31.3|GJE1 gap junction protein gamma 3 protein-coding KQ458385.1-1 KQ458385.1 167496 167706 + 8.13 0.000 NA NA NA NA chr12-7222 chr12 50619430 50619640 + 8.13 0.000 intron (NM_173602, intron 1 of 37) L2b|LINE|L2 114550 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr6-6537 chr6 131269997 131270207 + 8.13 0.000 intron (NM_138633, intron 2 of 2) L1ME1|LINE|L1 19698 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr2-3998 chr2 95276818 95277028 + 8.13 0.000 intron (NM_144707, intron 5 of 23) intron (NM_144707, intron 5 of 23) 2474 NM_001165978 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding chr4-6291 chr4 82653727 82653937 + 8.13 0.000 intron (NM_001037582, intron 3 of 4) intron (NM_001037582, intron 3 of 4) -32395 NR_024088 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr10-5254 chr10 67397872 67398082 + 8.13 0.000 intron (NM_001127384, intron 5 of 17) THE1C-int|LTR|ERVL-MaLR 5433 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr13-2345 chr13 35251668 35251878 + 8.13 0.000 intron (NM_015678, intron 34 of 57) intron (NM_015678, intron 34 of 57) 224916 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr9-5032 chr9 28296423 28296633 + 8.13 0.000 intron (NM_001354574, intron 4 of 5) intron (NM_001354574, intron 4 of 5) 422777 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr3-8448 chr3 120216333 120216543 + 8.13 0.000 intron (NM_001168271, intron 2 of 8) intron (NM_001168271, intron 2 of 8) 27857 NM_153002 165829 Hs.333358 NM_153002 ENSG00000175697 GPR156 GABABL|PGR28 G protein-coupled receptor 156 protein-coding chr4-6167 chr4 39794721 39794931 + 8.13 0.000 Intergenic AluY|SINE|Alu 96690 NM_001312647 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr9-3514 chr9 32527497 32527707 + 8.13 0.000 Intergenic AluJr|SINE|Alu -1406 NM_014314 23586 Hs.190622 NM_014314 ENSG00000107201 DDX58 RIG-I|RIG1|RIGI|RLR-1|SGMRT2 DExD/H-box helicase 58 protein-coding chr8-2356 chr8 27378746 27378956 + 8.13 0.000 intron (NM_173175, intron 1 of 29) intron (NM_173175, intron 1 of 29) 53287 NM_173175 2185 Hs.491322 NM_004103 ENSG00000120899 PTK2B CADTK|CAKB|FADK2|FAK2|PKB|PTK|PYK2|RAFTK protein tyrosine kinase 2 beta protein-coding chr3-3106 chr3 142557654 142557864 + 8.13 0.000 intron (NM_001354579, intron 7 of 45) AluSz6|SINE|Alu 20974 NM_001354579 545 Hs.271791 NM_001184 ENSG00000175054 ATR FCTCS|FRP1|MEC1|SCKL|SCKL1 ATR serine/threonine kinase protein-coding chr7-3626 chr7 39683338 39683548 + 8.13 0.000 intron (NM_005402, intron 1 of 4) L2a|LINE|L2 -50125 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr5-2677 chr5 37870952 37871162 + 8.13 0.000 intron (NR_103441, intron 1 of 3) intron (NR_103441, intron 1 of 3) 30619 NR_103441 100861519 Hs.536820 NM_001278094 GDNF-AS1 GDNFOS GDNF antisense RNA 1 ncRNA chrX-5358 chrX 149704527 149704737 + 8.13 0.000 intron (NM_001011544, intron 2 of 4) intron (NM_001011544, intron 2 of 4) -7428 NM_005366 4110 Hs.670252 NM_005366 ENSG00000185247 MAGEA11 CT1.11|MAGE-11|MAGE11|MAGEA-11 MAGE family member A11 protein-coding chr7-6362 chr7 150533937 150534147 + 8.13 0.000 Intergenic L1PA14|LINE|L1 19170 NM_153236 168537 Hs.647074 NM_153236 ENSG00000179144 GIMAP7 IAN7|hIAN7 GTPase, IMAP family member 7 protein-coding chr5-6370 chr5 139288541 139288751 + 8.13 0.000 intron (NM_001282278, intron 4 of 16) intron (NM_001282278, intron 4 of 16) -5094 NM_018834 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding chr12-7752 chr12 94653132 94653342 + 8.13 0.000 Intergenic AluSp|SINE|Alu -2680 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr3-5438 chr3 174310217 174310427 + 8.13 0.000 Intergenic Intergenic -389526 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr6-7560 chr6 71804845 71805055 + 8.13 0.000 Intergenic THE1B|LTR|ERVL-MaLR -81753 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chrX-4814 chrX 101482366 101482576 + 8.13 0.000 intron (NR_028407, intron 4 of 15) AluJr4|SINE|Alu -2985 NR_045864 100131755 Hs.729062 NM_152583 ENSG00000196440 ARMCX4 CXorf35|GASP4 armadillo repeat containing X-linked 4 protein-coding chr3-10470 chr3 134018323 134018533 + 8.13 0.000 intron (NM_005630, intron 1 of 13) intron (NM_005630, intron 1 of 13) 11497 NM_005630 6578 Hs.518270 NM_005630 ENSG00000174640 SLCO2A1 MATR1|OATP2A1|PGT|PHOAR2|SLC21A2 solute carrier organic anion transporter family member 2A1 protein-coding chr2-8137 chr2 81965745 81965955 + 8.13 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -498904 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr11-10283 chr11 104238723 104238933 + 8.13 0.000 Intergenic AluJb|SINE|Alu -74681 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr12-3753 chr12 46904631 46904841 + 8.13 0.000 Intergenic Intergenic -78739 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr2-4153 chr2 176473243 176473453 + 8.13 0.000 Intergenic Intergenic 127704 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr18-1150 chr18 11096204 11096414 + 8.13 0.000 intron (NM_022068, intron 1 of 51) intron (NM_022068, intron 1 of 51) 52453 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr9-3862 chr9 132242385 132242595 + 8.13 0.000 3' UTR (NM_032536, exon 8 of 8) 3' UTR (NM_032536, exon 8 of 8) 80432 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr6-6317 chr6 44532851 44533061 + 8.13 0.000 Intergenic Intergenic 18925 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr19-3566 chr19 46942877 46943087 + 8.13 0.000 intron (NM_004491, intron 3 of 6) L1MC4|LINE|L1 -76855 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr2-5806 chr2 231383246 231383456 + 8.13 0.000 Intergenic Intergenic -12359 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr22-2623 chr22 32754767 32754977 + 8.13 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -45944 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr19-2413 chr19 29949018 29949228 + 8.13 0.000 intron (NR_045557, intron 1 of 9) SVA_C|Retroposon|SVA 6884 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr4-4521 chr4 66597440 66597650 + 8.13 0.000 Intergenic L1MA5|LINE|L1 320721 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr2-11400 chr2 217980309 217980519 + 8.13 0.000 intron (NR_135524, intron 1 of 3) intron (NR_135524, intron 1 of 3) 1707 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr19-3751 chr19 49799957 49800167 + 8.13 0.000 exon (NM_014203, exon 11 of 24) exon (NM_014203, exon 11 of 24) 8196 NR_106857 102465479 NR_106857 ENSG00000276270 MIR6799 hsa-mir-6799 microRNA 6799 ncRNA chrX-1942 chrX 3388182 3388392 + 8.13 0.000 Intergenic Intergenic -41635 NM_015419 25878 Hs.369422 NM_015419 ENSG00000101825 MXRA5 - matrix remodeling associated 5 protein-coding chr7-5625 chr7 54081280 54081490 + 8.13 0.000 Intergenic MLT2F|LTR|ERVL -249312 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr21-824 chr21 38805182 38805392 + 8.13 0.000 promoter-TSS (NM_005239) promoter-TSS (NM_005239) 104 NM_001256295 2114 Hs.644231 NM_005239 ENSG00000157557 ETS2 ETS2IT1 ETS proto-oncogene 2, transcription factor protein-coding chr1-4309 chr1 33256399 33256609 + 8.13 0.000 promoter-TSS (NM_152493) promoter-TSS (NM_152493) 12 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr19-4397 chr19 3335691 3335901 + 8.13 0.000 Intergenic Intergenic -23834 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr14-2674 chr14 74280966 74281176 + 8.13 0.000 Intergenic Intergenic 21863 NM_001353603 5826 Hs.94395 NM_005050 ENSG00000119688 ABCD4 ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L ATP binding cassette subfamily D member 4 protein-coding chr1-16144 chr1 205417397 205417607 + 8.13 0.000 intron (NM_001199051, intron 2 of 4) intron (NM_001199051, intron 2 of 4) 4554 NR_037583 93273 Hs.655520 NM_001001552 ENSG00000186007 LEMD1 CT50|LEMP-1 LEM domain containing 1 protein-coding chr3-10802 chr3 160240651 160240861 + 8.13 0.000 intron (NR_148401, intron 18 of 18) LTR10F|LTR|ERV1 15120 NM_001168214 401097 Hs.729755 NM_001168214 ENSG00000180044 C3orf80 - chromosome 3 open reading frame 80 protein-coding chr5-6522 chr5 5246778 5246988 + 8.13 0.000 intron (NM_139056, intron 17 of 22) intron (NM_139056, intron 17 of 22) 106553 NM_139056 170690 Hs.661915 NM_139056 ENSG00000145536 ADAMTS16 ADAMTS16s ADAM metallopeptidase with thrombospondin type 1 motif 16 protein-coding chr9-4895 chr9 6323482 6323692 + 8.13 0.000 Intergenic MSTD|LTR|ERVL-MaLR -4788 NM_001001875 89882 Hs.351815 NM_033516 ENSG00000170777 TPD52L3 D55|NYDSP25|hD55 TPD52 like 3 protein-coding chr1-16654 chr1 241289894 241290104 + 8.13 0.000 intron (NM_001282778, intron 2 of 16) intron (NM_001282778, intron 2 of 16) 65827 NM_001350116 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr4-3754 chr4 84465346 84465556 + 8.13 0.000 Intergenic AluSp|SINE|Alu 32783 NM_006168 4825 Hs.546270 NM_006168 ENSG00000163623 NKX6-1 NKX6.1|NKX6A NK6 homeobox 1 protein-coding chr17-7885 chr17 43143807 43144017 + 8.13 0.000 intron (NR_138145, intron 7 of 7) intron (NR_138145, intron 7 of 7) 18355 NR_138145 10230 Hs.373818 NM_005821 ENSG00000198496 NBR2 NCRNA00192 neighbor of BRCA1 lncRNA 2 ncRNA chr2-8733 chr2 159682589 159682799 + 8.13 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 29748 NR_110586 29994 Hs.470369 NM_013450 ENSG00000123636 BAZ2B WALp4 bromodomain adjacent to zinc finger domain 2B protein-coding chr9-4782 chr9 134074831 134075041 + 8.13 0.000 Intergenic L1MB5|LINE|L1 -6910 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr20-1649 chr20 23879396 23879606 + 8.13 0.000 exon (NM_001900, exon 1 of 3) exon (NM_001900, exon 1 of 3) 247 NM_001900 1473 Hs.121489 NM_001900 ENSG00000170367 CST5 - cystatin D protein-coding chr7-5898 chr7 95285327 95285537 + 8.13 0.000 intron (NM_001166160, intron 17 of 19) intron (NM_001166160, intron 17 of 19) 39100 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr15-4342 chr15 40526455 40526665 + 8.13 0.000 Intergenic L1ME4b|LINE|L1 5990 NR_002208 359821 Hs.678598 NR_002208 MRPL42P5 - mitochondrial ribosomal protein L42 pseudogene 5 pseudo chr10-3393 chr10 29141113 29141323 + 8.13 0.000 Intergenic Intergenic -147852 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr13-2415 chr13 44506787 44506997 + 8.13 0.000 intron (NM_183422, intron 1 of 2) intron (NM_183422, intron 1 of 2) -32591 NM_001243798 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chrX-4122 chrX 26286904 26287114 + 8.13 0.000 Intergenic L1PA6|LINE|L1 70840 NM_001271752 347541 Hs.224079 NM_001271752 ENSG00000188408 MAGEB5 CT3.3|MAGE-B5 MAGE family member B5 protein-coding chrX-2247 chrX 46714299 46714509 + 8.13 0.000 intron (NM_001257291, intron 1 of 16) intron (NM_001257291, intron 1 of 16) 44714 NM_001257291 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr1-11375 chr1 42863519 42863729 + 8.13 0.000 intron (NR_104171, intron 1 of 3) L1M2|LINE|L1 6002 NR_104171 339539 Hs.434301 NR_104171 LOC339539 - uncharacterized LOC339539 ncRNA chr2-9757 chr2 85412977 85413187 + 8.13 0.000 intron (NM_001256139, intron 1 of 9) intron (NM_001256139, intron 1 of 9) 992 NM_001256139 822 Hs.516155 NM_001747 ENSG00000042493 CAPG AFCP|HEL-S-66|MCP capping actin protein, gelsolin like protein-coding chr9-6771 chr9 25589316 25589526 + 8.13 0.000 Intergenic AluSx1|SINE|Alu 89437 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr19-5372 chr19 8167394 8167604 + 8.13 0.000 Intergenic Intergenic -17907 NM_032447 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr11-3834 chr11 68619477 68619687 + 8.13 0.000 Intergenic AluJb|SINE|Alu -64962 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr2-14081 chr2 199018890 199019100 + 8.13 0.000 Intergenic Tigger9b|DNA|TcMar-Tigger 438944 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr8-5119 chr8 66092145 66092355 + 8.13 0.000 intron (NM_001349432, intron 5 of 5) intron (NM_001349432, intron 5 of 5) -34879 NM_184087 84675 Hs.85524 NM_033058 ENSG00000147573 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding chr8-6245 chr8 40328026 40328236 + 8.13 0.000 Intergenic L1MA5|LINE|L1 15232 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr7-4093 chr7 31332686 31332896 + 8.13 0.000 Intergenic MIRb|SINE|MIR 7935 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr3-4424 chr3 11671663 11671873 + 8.13 0.000 intron (NM_001284390, intron 2 of 6) intron (NM_001284390, intron 2 of 6) -27853 NM_001128219 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr14-4575 chr14 48990549 48990759 + 8.13 0.000 Intergenic Intergenic 595726 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr11-4623 chr11 12066892 12067102 + 8.13 0.000 Intergenic Intergenic 36122 NR_135109 105376554 Hs.523483 NR_135109 ENSG00000254486 LINC02547 - long intergenic non-protein coding RNA 2547 ncRNA chr8-2649 chr8 71929672 71929882 + 8.13 0.000 intron (NR_033651, intron 1 of 2) intron (NR_033651, intron 1 of 2) -85281 NM_005098 9242 Hs.442619 NM_005098 ENSG00000178860 MSC ABF-1|ABF1|MYOR|bHLHa22 musculin protein-coding chr17-6750 chr17 82774766 82774976 + 8.13 0.000 intron (NM_005993, intron 6 of 38) intron (NM_005993, intron 6 of 38) 22806 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr1-15034 chr1 93670387 93670597 + 8.13 0.000 intron (NM_001261409, intron 2 of 11) intron (NM_001261409, intron 2 of 11) 10878 NM_001261409 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr5-3728 chr5 31016566 31016776 + 8.13 0.000 Intergenic L2b|LINE|L2 -177015 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr1-15066 chr1 95767697 95767907 + 8.13 0.000 Intergenic L2a|LINE|L2 -224266 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr2-5139 chr2 25912928 25913138 + 8.13 0.000 Intergenic Intergenic -34546 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr4-5762 chr4 63465026 63465236 + 8.13 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 944319 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr12-5409 chr12 121664047 121664257 + 8.13 0.000 intron (NM_173855, intron 1 of 5) MLT1K|LTR|ERVL-MaLR 5502 NM_173855 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 - MORN repeat containing 3 protein-coding chr11-10634 chr11 125844800 125845010 + 8.13 0.000 Intergenic L1PA10|LINE|L1 11589 NM_001144874 399968 Hs.436215 NM_001144874 ENSG00000237353 PATE4 PATE-B prostate and testis expressed 4 protein-coding chr13-862 chr13 113903477 113903687 + 8.13 0.000 intron (NM_001278674, intron 3 of 7) intron (NM_001278674, intron 3 of 7) 8479 NM_001278674 643365 Hs.127655 NM_001039767 LINC00452 LINC00453 long intergenic non-protein coding RNA 452 protein-coding chr11-10217 chr11 97772650 97772860 + 8.13 0.000 Intergenic Intergenic -1248194 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr8-2334 chr8 16526320 16526530 + 8.13 0.000 Intergenic Intergenic -333634 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr1-16657 chr1 241422447 241422657 + 8.13 0.000 Intergenic Intergenic -65322 NM_001282773 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr13-1402 chr13 21558082 21558292 + 8.13 0.000 intron (NM_152726, intron 2 of 11) L1M4b|LINE|L1 45983 NM_152726 221154 Hs.412103 NM_152726 ENSG00000165487 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding chr1-14793 chr1 71097014 71097224 + 8.13 0.000 intron (NR_046217, intron 2 of 3) L2c|LINE|L2 15795 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr18-1416 chr18 7348074 7348284 + 8.13 0.000 Intergenic L1ME1|LINE|L1 112827 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chrX-4972 chrX 115518751 115518961 + 8.13 0.000 non-coding (NR_110383, exon 5 of 5) non-coding (NR_110383, exon 5 of 5) -42318 NM_001282337 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr4-8156 chr4 129111523 129111733 + 8.13 0.000 intron (NM_001099783, intron 5 of 5) intron (NM_001099783, intron 5 of 5) 15476 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr1-15083 chr1 97526904 97527114 + 8.13 0.000 intron (NM_000110, intron 12 of 22) MIRc|SINE|MIR -269912 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chrX-3689 chrX 109009261 109009471 + 8.13 0.000 Intergenic L1MC1|LINE|L1 272826 NR_110652 101928358 Hs.722300 NR_110652 ENSG00000237863 LOC101928358 - uncharacterized LOC101928358 ncRNA chr12-5120 chr12 97264747 97264957 + 8.13 0.000 Intergenic AluSz|SINE|Alu -197924 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr11-4681 chr11 63993345 63993555 + 8.13 0.000 intron (NR_003089, intron 3 of 5) AluSz|SINE|Alu 7597 NM_017670 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr3-4299 chr3 160131143 160131353 + 8.13 0.000 intron (NR_108088, intron 3 of 9) intron (NR_108088, intron 3 of 9) 75844 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr3-3334 chr3 4895951 4896161 + 8.13 0.000 TTS (NR_125914) TTS (NR_125914) 10445 NR_125914 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr10-8129 chr10 70136245 70136455 + 8.13 0.000 Intergenic Intergenic -3416 NM_001198696 84883 Hs.650680 NM_032797 ENSG00000042286 AIFM2 AMID|PRG3 apoptosis inducing factor mitochondria associated 2 protein-coding chr12-5155 chr12 101695831 101696041 + 8.13 0.000 Intergenic Intergenic -1704 NM_020244 56994 Hs.293077 NM_020244 ENSG00000111666 CHPT1 CPT|CPT1 choline phosphotransferase 1 protein-coding chr10-7995 chr10 60678969 60679179 + 8.13 0.000 intron (NM_001204403, intron 1 of 43) intron (NM_001204403, intron 1 of 43) 54454 NM_001204403 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr15-5173 chr15 92741223 92741433 + 8.13 0.000 Intergenic L1MC3|LINE|L1 -54156 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr2-4332 chr2 238566508 238566718 + 8.13 0.000 Intergenic LTR78B|LTR|ERV1 -11114 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr2-12776 chr2 85764060 85764270 + 8.13 0.000 exon (NM_032827, exon 2 of 3) exon (NM_032827, exon 2 of 3) 10174 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr14-3811 chr14 68854053 68854263 + 8.13 0.000 Intergenic Intergenic -57915 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr12-4020 chr12 39824815 39825025 + 8.13 0.000 intron (NR_135051, intron 18 of 18) L2c|LINE|L2 198737 NR_135051 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding chr1-5537 chr1 213414713 213414923 + 8.13 0.000 Intergenic Intergenic 363577 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr20-3204 chr20 51000721 51000931 + 8.13 0.000 Intergenic MER96B|DNA|hAT-Tip100 22281 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr11-4059 chr11 17221967 17222177 + 8.13 0.000 Intergenic Intergenic -14086 NM_002645 5286 Hs.175343 NM_002645 ENSG00000011405 PIK3C2A CPK|OCSKD|PI3-K-C2(ALPHA)|PI3-K-C2A|PI3K-C2-alpha|PI3K-C2alpha phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding chr10-2818 chr10 14831385 14831595 + 8.13 0.000 intron (NM_001029954, intron 1 of 3) (AT)n|Simple_repeat|Simple_repeat 6547 NM_001029954 441549 Hs.559067 NM_001029954 ENSG00000185267 CDNF ARMETL1 cerebral dopamine neurotrophic factor protein-coding chr17-3479 chr17 44324372 44324582 + 8.13 0.000 intron (NM_001321241, intron 1 of 11) CpG 346 NR_159404 51629 Hs.744880 NM_016016 ENSG00000013306 SLC25A39 CGI-69|CGI69 solute carrier family 25 member 39 protein-coding chr9-8401 chr9 119787038 119787248 + 8.13 0.000 Intergenic Intergenic -147917 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr1-6192 chr1 205048917 205049127 + 8.13 0.000 intron (NR_144350, intron 1 of 22) intron (NR_144350, intron 1 of 22) 5810 NR_144350 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr15-3139 chr15 66719547 66719757 + 8.13 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 17416 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr19-4325 chr19 1559073 1559283 + 8.13 0.000 intron (NM_203304, intron 1 of 1) AluSq|SINE|Alu 8880 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr7-7729 chr7 632664 632874 + 8.13 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 29371 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr10-2347 chr10 77405851 77406061 + 8.13 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 55084 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr5-8560 chr5 136121361 136121571 + 8.13 0.000 Intergenic Intergenic -11379 NM_001001420 4090 Hs.167700 NM_005903 ENSG00000113658 SMAD5 DWFC|JV5-1|MADH5 SMAD family member 5 protein-coding chr3-2407 chr3 190232072 190232282 + 8.13 0.000 Intergenic MamGypsy2-I|LTR|Gypsy 90269 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr12-4065 chr12 53120973 53121183 + 8.13 0.000 intron (NM_003578, intron 11 of 14) intron (NM_003578, intron 11 of 14) 17592 NM_003578 8435 Hs.656544 NM_003578 ENSG00000167780 SOAT2 ACACT2|ACAT2|ARGP2 sterol O-acyltransferase 2 protein-coding chr20-2191 chr20 50661273 50661483 + 8.13 0.000 intron (NM_001290268, intron 1 of 21) intron (NM_001290268, intron 1 of 21) 15907 NR_111906 100506175 Hs.658270 NR_111906 ENSG00000234693 LOC100506175 - uncharacterized LOC100506175 ncRNA chr2-3878 chr2 39772502 39772712 + 8.13 0.000 intron (NR_135664, intron 1 of 11) intron (NR_135664, intron 1 of 11) 6651 NM_025264 80745 Hs.468254 NM_025264 ENSG00000138050 THUMPD2 C2orf8 THUMP domain containing 2 protein-coding chr5-4565 chr5 22132772 22132982 + 8.13 0.000 intron (NM_004061, intron 4 of 14) intron (NM_004061, intron 4 of 14) -9475 NR_003921 5369 Hs.247975 NM_031887 ENSG00000168967 PMCHL1 - pro-melanin concentrating hormone like 1 (pseudogene) pseudo chr14-2415 chr14 61749949 61750159 + 8.13 0.000 promoter-TSS (NR_045406) promoter-TSS (NR_045406) -965 NR_045406 100750247 Hs.597216 NR_045406 HIF1A-AS2 3'aHIF-1A|aHIF HIF1A antisense RNA 2 ncRNA chr22-3637 chr22 21921895 21922105 + 8.13 0.000 3' UTR (NM_014634, exon 8 of 8) 3' UTR (NM_014634, exon 8 of 8) -16237 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr3-7209 chr3 191473563 191473773 + 8.13 0.000 intron (NR_120606, intron 1 of 6) MIRc|SINE|MIR 12505 NM_001083308 152138 Hs.690618 NM_001083308 ENSG00000253548 PYDC2 POP2|cPOP2 pyrin domain containing 2 protein-coding chr6-5817 chr6 17636478 17636688 + 8.13 0.000 intron (NM_005124, intron 16 of 21) intron (NM_005124, intron 16 of 21) 36281 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr9-4205 chr9 36849760 36849970 + 8.13 0.000 intron (NM_001280549, intron 6 of 7) intron (NM_001280549, intron 6 of 7) 14443 NR_039766 100616278 NR_039766 ENSG00000264922 MIR4540 - microRNA 4540 ncRNA chrX-4555 chrX 69492494 69492704 + 8.13 0.000 Intergenic Intergenic -12636 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr4-5913 chr4 141416921 141417131 + 8.13 0.000 Intergenic MER30|DNA|hAT-Charlie -84409 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr5-6840 chr5 115414404 115414614 + 8.13 0.000 Intergenic Intergenic -117855 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr7-5122 chr7 4833104 4833314 + 8.13 0.000 intron (NM_018059, intron 4 of 14) MIRb|SINE|MIR 4241 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr1-10259 chr1 119593871 119594081 + 8.13 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 5315 NR_036540 644242 Hs.515383 NR_036540 ENSG00000260941 LINC00622 - long intergenic non-protein coding RNA 622 ncRNA chr13-2877 chr13 111323685 111323895 + 8.13 0.000 intron (NM_152324, intron 2 of 5) intron (NM_152324, intron 2 of 5) 3148 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr1-4763 chr1 9439097 9439307 + 8.13 0.000 Intergenic Intergenic -10206 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr4-3690 chr4 53906049 53906259 + 8.13 0.000 Intergenic Intergenic 81128 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr10-3855 chr10 17206277 17206487 + 8.13 0.000 Intergenic MIR|SINE|MIR -4311 NM_001351223 1787 Hs.351665 NM_004412 ENSG00000107614 TRDMT1 DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 tRNA aspartic acid methyltransferase 1 protein-coding chr7-5320 chr7 26333158 26333368 + 8.13 0.000 intron (NM_001318199, intron 1 of 6) L1MB8|LINE|L1 -27621 NM_001199837 29887 Hs.741316 NM_013322 ENSG00000086300 SNX10 OPTB8 sorting nexin 10 protein-coding chr18-3045 chr18 28250243 28250453 + 8.13 0.000 Intergenic LTR33|LTR|ERVL -73218 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chrX-4531 chrX 67707120 67707330 + 8.13 0.000 intron (NM_001011645, intron 4 of 8) L1PA5|LINE|L1 162602 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr7-3983 chr7 136165261 136165471 + 8.13 0.000 Intergenic Intergenic -188007 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr19-5781 chr19 32537828 32538038 + 8.13 0.000 Intergenic Intergenic -43257 NM_004708 9141 Hs.443831 NM_004708 ENSG00000105185 PDCD5 TFAR19 programmed cell death 5 protein-coding chr4-6487 chr4 152456772 152456982 + 8.13 0.000 intron (NM_001349798, intron 2 of 13) L1ME1|LINE|L1 32539 NR_036092 100422896 NR_036092 ENSG00000264678 MIR3140 mir-3140 microRNA 3140 ncRNA chr8-6550 chr8 69410352 69410562 + 8.13 0.000 Intergenic Intergenic 37787 NR_110433 100505739 Hs.127115 NR_110433 LINC01603 - long intergenic non-protein coding RNA 1603 ncRNA chr11-5816 chr11 7215023 7215233 + 8.13 0.000 Intergenic L1ME4a|LINE|L1 -19638 NR_031683 100313774 NR_031683 ENSG00000221703 MIR302E MIRN302E microRNA 302e ncRNA chr10-7016 chr10 75987990 75988200 + 8.13 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 205334 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr7-8763 chr7 78689698 78689908 + 8.13 0.000 intron (NM_001301128, intron 2 of 20) L1ME2|LINE|L1 -319185 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr5-2180 chr5 133236693 133236903 + 8.13 0.000 intron (NM_015082, intron 7 of 15) L2a|LINE|L2 184785 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr1-8339 chr1 54188378 54188588 + 8.13 0.000 intron (NM_001353354, intron 3 of 6) L3|LINE|CR1 11547 NM_001353354 606495 Hs.591426 NM_001031672 ENSG00000215883 CYB5RL - cytochrome b5 reductase like protein-coding chr3-8520 chr3 137843058 137843268 + 8.13 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 71252 NR_109987 100507274 Hs.360349 NR_109987 ENSG00000239513 LINC01210 - long intergenic non-protein coding RNA 1210 ncRNA chr12-6531 chr12 111310028 111310238 + 8.13 0.000 exon (NM_001370598, exon 15 of 22) exon (NM_001370598, exon 15 of 22) 5991 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr5-3487 chr5 172703144 172703354 + 8.13 0.000 Intergenic L2c|LINE|L2 41084 NR_049799 100847029 NR_049799 ENSG00000265160 MIR5003 - microRNA 5003 ncRNA chr22-2243 chr22 26442472 26442682 + 8.13 0.000 TTS (NM_001349904) TTS (NM_001349904) 13317 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr14-5210 chr14 96025387 96025597 + 8.13 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -13832 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr11-3992 chr11 3103162 3103372 + 8.13 0.000 exon (NM_145638, exon 10 of 21) exon (NM_145638, exon 10 of 21) -45844 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr9-8603 chr9 128353564 128353774 + 8.13 0.000 intron (NM_005094, intron 9 of 12) intron (NM_005094, intron 9 of 12) 1622 NR_031672 100302233 NR_031672 ENSG00000221641 MIR1268A MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a microRNA 1268a ncRNA chr14-3022 chr14 55208335 55208545 + 8.13 0.000 Intergenic HAL1ME|LINE|L1 -16855 NM_014750 9787 Hs.77695 NM_014750 ENSG00000126787 DLGAP5 DLG7|HURP DLG associated protein 5 protein-coding chr3-8731 chr3 194598974 194599184 + 8.13 0.000 intron (NM_138399, intron 9 of 10) intron (NM_138399, intron 9 of 10) 14811 NR_047574 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr1-12634 chr1 40607066 40607276 + 8.13 0.000 Intergenic Intergenic 58511 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr3-1969 chr3 117035892 117036102 + 8.13 0.000 Intergenic Intergenic 114566 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr7-4679 chr7 39918070 39918280 + 8.13 0.000 Intergenic AluSz6|SINE|Alu 31244 NR_158201 112267983 Hs.587424 NR_158201 LOC112267983 - uncharacterized LOC112267983 ncRNA chr3-8184 chr3 39407343 39407553 + 8.13 0.000 promoter-TSS (NR_002325) promoter-TSS (NR_002325) 728 NM_001304288 3921 Hs.449909 NM_002295 ENSG00000168028 RPSA 37LRP|67LR|ICAS|LAMBR|LAMR1|LBP|LBP/p40|LRP|LRP/LR|NEM/1CHD4|SA|lamR|p40 ribosomal protein SA protein-coding chr21-1002 chr21 15381203 15381413 + 8.13 0.000 Intergenic LTR1B|LTR|ERV1 -316308 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr1-7514 chr1 154776218 154776428 + 8.13 0.000 intron (NM_170782, intron 2 of 7) MIRc|SINE|MIR 83553 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr2-5873 chr2 240391425 240391635 + 8.13 0.000 Intergenic Intergenic -44133 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr5-6749 chr5 79519724 79519934 + 8.13 0.000 Intergenic MLT2B2|LTR|ERVL -5695 NM_004272 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr16-6962 chr16 86053839 86054049 + 8.13 0.000 Intergenic Charlie4a|DNA|hAT-Charlie 135597 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr11-7492 chr11 2465773 2465983 + 8.13 0.000 intron (NM_181798, intron 1 of 15) intron (NM_181798, intron 1 of 15) 4424 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr1-10981 chr1 216071107 216071317 + 8.13 0.000 intron (NM_206933, intron 29 of 71) intron (NM_206933, intron 29 of 71) -1253 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr2-13151 chr2 119054181 119054391 + 8.13 0.000 Intergenic Intergenic 104465 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr4-4341 chr4 37561171 37561381 + 8.13 0.000 intron (NM_001104629, intron 2 of 3) intron (NM_001104629, intron 2 of 3) -22957 NM_018302 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr13-856 chr13 101520755 101520965 + 8.13 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 30908 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr9-8619 chr9 128713814 128714024 + 8.13 0.000 intron (NM_013355, intron 9 of 21) MIR3|SINE|MIR 10208 NM_001318016 84885 Hs.133122 NM_032799 ENSG00000160446 ZDHHC12 DHHC-12|ZNF400 zinc finger DHHC-type containing 12 protein-coding chr8-2590 chr8 48860541 48860751 + 8.13 0.000 Intergenic Intergenic 60783 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chrX-5060 chrX 123974250 123974460 + 8.13 0.000 intron (NM_006603, intron 1 of 32) AluSx1|SINE|Alu 12649 NM_001042751 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr8-3396 chr8 62979831 62980041 + 8.13 0.000 non-coding (NR_027378, exon 1 of 1) non-coding (NR_027378, exon 1 of 1) 2075 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr20-4212 chr20 47320838 47321048 + 8.13 0.000 TTS (NR_024594) TTS (NR_024594) 2441 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr4-8590 chr4 169345394 169345604 + 8.13 0.000 Intergenic Intergenic -74543 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr22-2406 chr22 17676928 17677138 + 8.13 0.000 intron (NR_073068, intron 2 of 4) intron (NR_073068, intron 2 of 4) 21371 NR_073068 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr20-1492 chr20 22234996 22235206 + 8.13 0.000 Intergenic Intergenic 47700 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chr11-6304 chr11 61633130 61633340 + 8.13 0.000 intron (NR_002775, intron 3 of 4) MER1A|DNA|hAT-Charlie 18199 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr12-8086 chr12 117644389 117644599 + 8.13 0.000 intron (NM_173598, intron 5 of 19) MER5B|DNA|hAT-Charlie -282692 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr12-2254 chr12 88580442 88580652 + 8.13 0.000 promoter-TSS (NM_003994) promoter-TSS (NM_003994) -74 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr13-1819 chr13 59746545 59746755 + 8.13 0.000 intron (NM_001258366, intron 26 of 26) intron (NM_001258366, intron 26 of 26) -266068 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chrX-5170 chrX 132850866 132851076 + 8.13 0.000 intron (NM_001077188, intron 3 of 5) intron (NM_001077188, intron 3 of 5) 110399 NM_147175 90161 Hs.385956 NM_147175 ENSG00000171004 HS6ST2 MRXSPM heparan sulfate 6-O-sulfotransferase 2 protein-coding chr2-5717 chr2 215813129 215813339 + 8.13 0.000 intron (NR_037195, intron 1 of 9) ERV24_Prim-int|LTR|ERV1 30302 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr4-3523 chr4 155267955 155268165 + 8.13 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 59424 NM_001370180 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr16-6378 chr16 52732732 52732942 + 8.13 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -125862 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr12-5423 chr12 122305136 122305346 + 8.13 0.000 intron (NM_198240, intron 18 of 23) intron (NM_198240, intron 18 of 23) -38747 NM_001351021 65082 Hs.487883 NM_022916 ENSG00000139719 VPS33A MPSPS VPS33A core subunit of CORVET and HOPS complexes protein-coding chr8-1240 chr8 123541140 123541350 + 8.13 0.000 promoter-TSS (NM_001242463) promoter-TSS (NM_001242463) -39 NM_058229 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr1-13194 chr1 207609324 207609534 + 8.13 0.000 exon (NM_000651, exon 37 of 47) exon (NM_000651, exon 37 of 47) -35704 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr2-13495 chr2 149110033 149110243 + 8.13 0.000 intron (NM_001317004, intron 1 of 6) L1ME1|LINE|L1 -8036 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr20-2206 chr20 57514216 57514426 + 8.13 0.000 intron (NR_072975, intron 6 of 10) intron (NR_072975, intron 6 of 10) 10546 NR_072975 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr5-8570 chr5 137009541 137009751 + 8.13 0.000 intron (NM_004598, intron 6 of 10) intron (NM_004598, intron 6 of 10) -118551 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr12-7246 chr12 51687958 51688168 + 8.13 0.000 intron (NM_001369788, intron 5 of 25) intron (NM_001369788, intron 5 of 25) 96827 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr7-8483 chr7 50416730 50416940 + 8.13 0.000 Intergenic Intergenic 33515 NM_001346560 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr21-1596 chr21 16216523 16216733 + 8.13 0.000 intron (NR_136543, intron 1 of 4) intron (NR_136543, intron 1 of 4) 22249 NR_136543 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr18-2627 chr18 35752703 35752913 + 8.13 0.000 Intergenic Intergenic 98239 NM_020474 2589 Hs.514806 NM_020474 ENSG00000141429 GALNT1 GALNAC-T1 polypeptide N-acetylgalactosaminyltransferase 1 protein-coding chr13-1937 chr13 93505385 93505595 + 8.13 0.000 intron (NM_005708, intron 1 of 8) Tigger17c|DNA|TcMar-Tigger 278683 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr19-6777 chr19 40848516 40848726 + 8.13 0.000 exon (NM_000762, exon 3 of 9) exon (NM_000762, exon 3 of 9) 1826 NM_000762 1548 Hs.250615 NM_000762 ENSG00000255974 CYP2A6 CPA6|CYP2A|CYP2A3|CYPIIA6|P450C2A|P450PB cytochrome P450 family 2 subfamily A member 6 protein-coding chr11-4828 chr11 12687079 12687289 + 8.13 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 12763 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr2-13951 chr2 186088529 186088739 + 8.13 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -2317 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr11-8484 chr11 118586854 118587064 + 8.13 0.000 intron (NM_001655, intron 5 of 9) intron (NM_001655, intron 5 of 9) 14550 NM_001655 372 Hs.33642 NM_001655 ENSG00000095139 ARCN1 COPD|SRMMD archain 1 protein-coding chr8-3511 chr8 114592874 114593084 + 8.13 0.000 Intergenic Intergenic 1075034 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr12-5385 chr12 120591769 120591979 + 8.13 0.000 Intergenic L2b|LINE|L2 -10472 NM_015918 51367 Hs.279913 NM_015918 ENSG00000167272 POP5 HSPC004|RPP2|RPP20|hPop5 POP5 homolog, ribonuclease P/MRP subunit protein-coding chr15-4761 chr15 69681183 69681393 + 8.13 0.000 intron (NR_126438, intron 3 of 3) intron (NR_126438, intron 3 of 3) 89088 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr2-11806 chr2 16896863 16897073 + 8.13 0.000 Intergenic MER45B|DNA|hAT-Tip100 -231134 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr18-1162 chr18 12543735 12543945 + 8.13 0.000 intron (NM_020148, intron 3 of 15) intron (NM_020148, intron 3 of 15) 111066 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chr16-5670 chr16 69861175 69861385 + 8.13 0.000 intron (NM_001270453, intron 3 of 20) intron (NM_001270453, intron 3 of 20) 22543 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr6-6983 chr6 19365704 19365914 + 8.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -84012 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA chr1-6102 chr1 145884679 145884889 + 8.13 0.000 intron (NM_144698, intron 1 of 13) intron (NM_144698, intron 1 of 13) 1082 NM_001280799 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 - ankyrin repeat domain 35 protein-coding chr22-3678 chr22 23543107 23543317 + 8.13 0.000 intron (NR_109832, intron 2 of 3) HERVK-int|LTR|ERVK 5110 NR_109832 101978785 Hs.575107 NR_109832 PCAT14 - prostate cancer associated transcript 14 ncRNA chr15-4057 chr15 67701747 67701957 + 8.13 0.000 intron (NM_001206804, intron 15 of 21) intron (NM_001206804, intron 15 of 21) -123657 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr2-9675 chr2 32263684 32263894 + 8.13 0.000 intron (NM_001199139, intron 1 of 8) MLT1B|LTR|ERVL-MaLR 1097 NM_001199138 58484 Hs.574741 NM_021209 ENSG00000091106 NLRC4 AIFEC|CARD12|CLAN|CLAN1|CLANA|CLANB|CLANC|CLAND|CLR2.1|FCAS4|IPAF NLR family CARD domain containing 4 protein-coding chr2-4087 chr2 135283551 135283761 + 8.13 0.000 intron (NM_001286569, intron 8 of 21) intron (NM_001286569, intron 8 of 21) 147028 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr5-8256 chr5 111629027 111629237 + 8.13 0.000 intron (NR_040093, intron 1 of 6) L1ME2|LINE|L1 -116535 NR_131752 134429 Hs.93842 NM_139164 ENSG00000164211 STARD4 - StAR related lipid transfer domain containing 4 protein-coding chr19-6728 chr19 38095623 38095833 + 8.13 0.000 intron (NM_015073, intron 4 of 21) intron (NM_015073, intron 4 of 21) -67368 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr19-5805 chr19 36107448 36107658 + 8.13 0.000 Intergenic Intergenic -3650 NM_001302757 728361 Hs.143920 NM_001270948 ENSG00000105261 OVOL3 HOVO3 ovo like zinc finger 3 protein-coding chr5-4098 chr5 68240274 68240484 + 8.13 0.000 intron (NM_181523, intron 2 of 15) intron (NM_181523, intron 2 of 15) 24623 NM_181523 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr1-12692 chr1 51339626 51339836 + 8.13 0.000 intron (NM_001144832, intron 1 of 17) AluJb|SINE|Alu 5385 NM_001144832 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr1-9099 chr1 16889430 16889640 + 8.13 0.000 promoter-TSS (NR_135056) promoter-TSS (NR_135056) -57 NR_135056 105376805 Hs.465405 NR_135056 ENSG00000238142 LOC105376805 - uncharacterized LOC105376805 ncRNA chr5-4802 chr5 57650268 57650478 + 8.13 0.000 promoter-TSS (NR_104668) promoter-TSS (NR_104668) -287 NR_104668 101928505 Hs.119998 NR_104668 LOC101928505 - uncharacterized LOC101928505 ncRNA chr12-7380 chr12 56979617 56979827 + 8.13 0.000 Intergenic L1M1|LINE|L1 -14770 NM_007264 11318 Hs.483909 NM_007264 ENSG00000166856 GPR182 7TMR|ADMR|AM-R|AMR|G10D|L1-R|gamrh|hrhAMR G protein-coupled receptor 182 protein-coding chr17-3412 chr17 6940434 6940644 + 8.13 0.000 Intergenic MER51A|LTR|ERV1 46762 NR_120453 245 Hs.378695 NR_002710 ENSG00000262943 ALOX12P2 ALOX12E arachidonate 12-lipoxygenase pseudogene 2 pseudo chr3-6901 chr3 156442251 156442461 + 8.13 0.000 intron (NR_046618, intron 2 of 2) intron (NR_046618, intron 2 of 2) 4580 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr10-5271 chr10 68153543 68153753 + 8.13 0.000 intron (NR_045663, intron 6 of 17) intron (NR_045663, intron 6 of 17) 44160 NR_045663 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr12-6741 chr12 6345511 6345721 + 8.13 0.000 Intergenic Intergenic -3499 NM_001065 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr10-6339 chr10 122660907 122661117 + 8.13 0.000 Intergenic MIR|SINE|MIR -11870 NM_001364461 112577516 NM_001364461 LOC112577516 - carbohydrate-binding protein AQN-1-like protein-coding chr11-7383 chr11 75593424 75593634 + 8.13 0.000 intron (NM_033063, intron 3 of 3) intron (NM_033063, intron 3 of 3) 10333 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr6-7524 chr6 67797830 67798040 + 8.13 0.000 Intergenic L1MA3|LINE|L1 -257416 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr7-8716 chr7 75535066 75535276 + 8.13 0.000 3' UTR (NM_001243198, exon 29 of 29) 3' UTR (NM_001243198, exon 29 of 29) -7048 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr10-4006 chr10 344030 344240 + 8.13 0.000 intron (NM_014974, intron 28 of 36) intron (NM_014974, intron 28 of 36) 164141 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr6-6110 chr6 153281199 153281409 + 8.13 0.000 Intergenic Intergenic -150022 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chrX-3543 chrX 56324938 56325148 + 8.13 0.000 Intergenic L1PA3|LINE|L1 91885 NM_001324099 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr5-4126 chr5 81383994 81384204 + 8.13 0.000 intron (NM_130767, intron 2 of 14) Tigger3b|DNA|TcMar-Tigger 10035 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr1-8592 chr1 181571621 181571831 + 8.13 0.000 intron (NM_001205293, intron 3 of 47) intron (NM_001205293, intron 3 of 47) 88209 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr15-3487 chr15 96551983 96552193 + 8.13 0.000 Intergenic Intergenic 218323 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr17-7236 chr17 1509434 1509644 + 8.13 0.000 intron (NM_001135642, intron 6 of 13) intron (NM_001135642, intron 6 of 13) 7073 NM_001135642 51763 Hs.632238 NM_016532 ENSG00000132376 INPP5K MDCCAID|PPS|SKIP inositol polyphosphate-5-phosphatase K protein-coding chr10-3482 chr10 66637259 66637469 + 8.13 0.000 intron (NM_001127384, intron 9 of 17) intron (NM_001127384, intron 9 of 17) -288672 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr2-11916 chr2 24818850 24819060 + 8.13 0.000 TTS (NM_004036) TTS (NM_004036) 25530 NR_136183 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr4-7762 chr4 94385402 94385612 + 8.13 0.000 Intergenic HERVH-int|LTR|ERV1 -42671 NM_014485 27306 Hs.128433 NM_014485 ENSG00000163106 HPGDS GSTS|GSTS1|GSTS1-1|PGD2|PGDS hematopoietic prostaglandin D synthase protein-coding chr13-1043 chr13 90415249 90415459 + 8.13 0.000 Intergenic Intergenic -77934 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr3-8411 chr3 106375800 106376010 + 8.13 0.000 Intergenic Intergenic -506504 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr2-5603 chr2 178066854 178067064 + 8.13 0.000 intron (NM_001077197, intron 2 of 20) MER45R|DNA|hAT-Tip100 5818 NM_016953 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr1-14905 chr1 83659476 83659686 + 8.13 0.000 intron (NR_119375, intron 2 of 2) MLT1D|LTR|ERVL-MaLR 200965 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr17-7603 chr17 22374779 22374989 + 8.13 0.000 Intergenic SST1|Satellite|centr -31135 NR_027084 284124 Hs.310247 NR_027084 ENSG00000276399 FLJ36000 - uncharacterized FLJ36000 ncRNA chr2-4486 chr2 1864252 1864462 + 8.13 0.000 intron (NM_015025, intron 18 of 24) intron (NM_015025, intron 18 of 24) -119842 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr8-4104 chr8 69841647 69841857 + 8.13 0.000 Intergenic LTR67B|LTR|ERVL -6774 NM_030958 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr13-4280 chr13 98315583 98315793 + 8.13 0.000 intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 107164 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr11-3638 chr11 77053651 77053861 + 8.13 0.000 Intergenic MER83|LTR|ERV1 -13215 NM_004055 726 Hs.248153 NM_004055 ENSG00000149260 CAPN5 ADNIV|HTRA3|VRNI|nCL-3 calpain 5 protein-coding chr12-1654 chr12 48968160 48968370 + 8.13 0.000 exon (NM_003394, exon 4 of 5) exon (NM_003394, exon 4 of 5) 3470 NM_003394 7480 Hs.91985 NM_003394 ENSG00000169884 WNT10B SHFM6|STHAG8|WNT-12 Wnt family member 10B protein-coding chr2-11548 chr2 241097176 241097386 + 8.13 0.000 non-coding (NR_138463, exon 3 of 7) non-coding (NR_138463, exon 3 of 7) 5006 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr5-2205 chr5 167597317 167597527 + 8.13 0.000 intron (NM_001368145, intron 1 of 26) AluSx3|SINE|Alu 23763 NM_001368146 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr10-8277 chr10 76550861 76551071 + 8.13 0.000 intron (NM_001305581, intron 6 of 6) intron (NM_001305581, intron 6 of 6) -337078 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr17-8095 chr17 55795330 55795540 + 8.13 0.000 intron (NM_001330378, intron 5 of 5) intron (NM_001330378, intron 5 of 5) 44330 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr4-3233 chr4 55155026 55155236 + 8.13 0.000 Intergenic Intergenic -29536 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr17-7294 chr17 3966580 3966790 + 8.13 0.000 Intergenic L3b|LINE|CR1 -2221 NM_174956 489 Hs.513870 NM_005173 ENSG00000074370 ATP2A3 SERCA3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 protein-coding chr2-3646 chr2 150553320 150553530 + 8.13 0.000 intron (NR_110241, intron 5 of 5) intron (NR_110241, intron 5 of 5) 18796 NR_110241 101929260 Hs.732324 NR_110241 ENSG00000236049 LINC01920 - long intergenic non-protein coding RNA 1920 ncRNA chr9-7519 chr9 33377900 33378110 + 8.13 0.000 Intergenic Intergenic 24563 NM_001170 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr8-3773 chr8 24771219 24771429 + 8.13 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -142437 NM_005382 4741 Hs.458657 NM_005382 ENSG00000104722 NEFM NEF3|NF-M|NFM neurofilament medium protein-coding chr19-2440 chr19 49006902 49007112 + 8.13 0.000 intron (NM_006666, intron 4 of 14) intron (NM_006666, intron 4 of 14) -2899 NR_106856 102466738 NR_106856 ENSG00000273898 MIR6798 hsa-mir-6798 microRNA 6798 ncRNA GL383555.2-2 GL383555.2 200036 200246 + 8.13 0.000 NA NA NA NA chr14-1527 chr14 57871608 57871818 + 8.13 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -5621 NM_001306087 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr4-6828 chr4 8124621 8124831 + 8.13 0.000 intron (NM_001130084, intron 1 of 19) L1MB8|LINE|L1 34087 NM_001130085 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chrX-2031 chrX 16725526 16725736 + 8.13 0.000 intron (NR_033181, intron 1 of 8) intron (NR_033181, intron 1 of 8) 6019 NR_033181 94056 Hs.744256 NM_032796 ENSG00000169895 SYAP1 BSTA|PRO3113 synapse associated protein 1 protein-coding chr1-7211 chr1 220353734 220353944 + 8.13 0.000 Intergenic LTR1|LTR|ERV1 -81386 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr6-2564 chr6 43076405 43076615 + 8.13 0.000 promoter-TSS (NM_001270398) promoter-TSS (NM_001270398) 196 NM_002821 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr4-2035 chr4 4860148 4860358 + 8.13 0.000 exon (NM_002448, exon 1 of 2) exon (NM_002448, exon 1 of 2) 588 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr19-5797 chr19 35487047 35487257 + 8.13 0.000 TTS (NM_001244847) TTS (NM_001244847) 3312 NM_001244847 388533 Hs.112457 NM_207392 ENSG00000188508 KRTDAP KDAP|UNQ467 keratinocyte differentiation associated protein protein-coding chr2-5258 chr2 57959592 57959802 + 8.13 0.000 intron (NM_001288838, intron 1 of 15) intron (NM_001288838, intron 1 of 15) 52046 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr6-8237 chr6 137084029 137084239 + 8.13 0.000 Intergenic MER103C|DNA|hAT-Charlie -38954 NM_001278723 53832 Hs.445868 NM_014432 ENSG00000016402 IL20RA CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA interleukin 20 receptor subunit alpha protein-coding chr14-1725 chr14 50804356 50804566 + 8.13 0.000 intron (NM_016350, intron 4 of 28) intron (NM_016350, intron 4 of 28) -17336 NR_135258 105370489 Hs.569387 NR_135258 ENSG00000258843 LOC105370489 - uncharacterized LOC105370489 ncRNA chr7-3370 chr7 101162921 101163131 + 8.13 0.000 exon (NM_003378, exon 2 of 2) exon (NM_003378, exon 2 of 2) 2543 NM_003378 7425 Hs.587325 NM_003378 ENSG00000128564 VGF SCG7|SgVII VGF nerve growth factor inducible protein-coding chr8-2979 chr8 92734676 92734886 + 8.13 0.000 intron (NR_046114, intron 1 of 2) intron (NR_046114, intron 1 of 2) 51279 NR_046114 441369 Hs.521683 NR_046114 ENSG00000248858 FLJ46284 - uncharacterized LOC441369 ncRNA chr13-2891 chr13 112877022 112877232 + 8.13 0.000 intron (NM_032189, intron 28 of 28) intron (NM_032189, intron 28 of 28) 91511 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chrX-2323 chrX 56038720 56038930 + 8.13 0.000 intron (NM_001324104, intron 2 of 6) L1PA11|LINE|L1 130540 NM_001324104 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr16-4695 chr16 81423868 81424078 + 8.13 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -21197 NM_198390 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding chr17-7488 chr17 16189948 16190158 + 8.13 0.000 intron (NM_001190440, intron 1 of 44) AluJr|SINE|Alu 4586 NM_001190438 9611 Hs.462323 NM_006311 ENSG00000141027 NCOR1 N-CoR|N-CoR1|PPP1R109|TRAC1|hN-CoR nuclear receptor corepressor 1 protein-coding chr13-4236 chr13 96020711 96020921 + 8.13 0.000 intron (NM_020121, intron 4 of 38) intron (NM_020121, intron 4 of 38) 32585 NM_020121 55757 Hs.193226 NM_020121 ENSG00000102595 UGGT2 HUGT2|UGCGL2|UGT2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding chr9-4958 chr9 16526483 16526693 + 8.13 0.000 intron (NM_001317939, intron 4 of 6) intron (NM_001317939, intron 4 of 6) -200226 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr7-5412 chr7 34811603 34811813 + 8.13 0.000 intron (NM_207172, intron 3 of 8) intron (NM_207172, intron 3 of 8) 22623 NR_015356 404744 Hs.487951 NM_207283 ENSG00000197085 NPSR1-AS1 AAA1 NPSR1 antisense RNA 1 ncRNA chr7-9119 chr7 107838691 107838901 + 8.13 0.000 Intergenic MER30|DNA|hAT-Charlie -35563 NM_000111 1811 Hs.1650 NM_000111 ENSG00000091138 SLC26A3 CLD|DRA solute carrier family 26 member 3 protein-coding chr20-1907 chr20 63044749 63044959 + 8.13 0.000 intron (NR_033369, intron 1 of 5) intron (NR_033369, intron 1 of 5) 6843 NR_033369 100144597 Hs.636485 NR_033369 ENSG00000237119 LINC01056 - long intergenic non-protein coding RNA 1056 ncRNA chr3-5286 chr3 123037537 123037747 + 8.13 0.000 Intergenic X7C_LINE|LINE|CR1 -9037 NR_046079 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr21-1108 chr21 35016549 35016759 + 8.13 0.000 intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) 22772 NR_026812 80215 Hs.672131 NM_025143 RUNX1-IT1 C21orf96 RUNX1 intronic transcript 1 ncRNA chr9-6535 chr9 112510213 112510423 + 8.13 0.000 intron (NM_133465, intron 1 of 3) MIRb|SINE|MIR -22674 NM_001350649 100133204 Hs.662552 NM_001350649 C9orf147 - chromosome 9 open reading frame 147 protein-coding chr9-2523 chr9 120016159 120016369 + 8.13 0.000 Intergenic MSTA|LTR|ERVL-MaLR 81204 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr2-6366 chr2 105652631 105652841 + 8.13 0.000 Intergenic Intergenic -42177 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chr19-4121 chr19 18102716 18102926 + 8.13 0.000 intron (NM_015016, intron 1 of 26) AluSz|SINE|Alu -4005 NM_001290024 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr6-4980 chr6 107205458 107205668 + 8.13 0.000 intron (NM_020381, intron 6 of 7) intron (NM_020381, intron 6 of 7) -90048 NM_001367314 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr1-7249 chr1 227910387 227910597 + 8.13 0.000 Intergenic Intergenic 31191 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr8-2601 chr8 54510716 54510926 + 8.13 0.000 Intergenic Intergenic 52886 NM_022454 64321 Hs.98367 NM_022454 ENSG00000164736 SOX17 VUR3 SRY-box transcription factor 17 protein-coding chr10-3745 chr10 119786241 119786451 + 8.13 0.000 intron (NM_014937, intron 3 of 19) intron (NM_014937, intron 3 of 19) -32911 NM_001243194 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr2-4582 chr2 95316780 95316990 + 8.13 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) 19538 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr5-3968 chr5 9603337 9603547 + 8.13 0.000 Intergenic Intergenic 26909 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr1-11311 chr1 20263853 20264063 + 8.13 0.000 Intergenic Intergenic 20863 NR_147205 105376827 Hs.559701 NR_147205 ENSG00000228105 LINC01757 - long intergenic non-protein coding RNA 1757 ncRNA chr5-6537 chr5 10366737 10366947 + 8.13 0.000 intron (NM_001270661, intron 1 of 22) LTR3B_|LTR|ERVK 13147 NM_005885 10299 Hs.432862 NM_005885 ENSG00000145495 MARCH6 DOA10|MARCH-VI|RNF176|TEB4 membrane associated ring-CH-type finger 6 protein-coding chr10-8649 chr10 99674600 99674810 + 8.13 0.000 intron (NM_001349962, intron 4 of 13) L1MB2|LINE|L1 15076 NM_001349963 57089 Hs.28326 NM_020354 ENSG00000198018 ENTPD7 LALP1 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding chr10-4309 chr10 15973298 15973508 + 8.13 0.000 Intergenic MIRb|SINE|MIR -112870 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chr2-13848 chr2 177224043 177224253 + 8.13 0.000 TTS (NM_001330248) TTS (NM_001330248) 11354 NR_138470 220988 Hs.516539 NM_194247 ENSG00000170144 HNRNPA3 2610510D13Rik|D10S102|FBRNP|HNRPA3 heterogeneous nuclear ribonucleoprotein A3 protein-coding chr2-10256 chr2 119574157 119574367 + 8.13 0.000 intron (NR_073132, intron 6 of 24) intron (NR_073132, intron 6 of 24) 29813 NM_001271049 200373 Hs.496753 NM_001029996 ENSG00000163075 CFAP221 FAP221|PCDP1 cilia and flagella associated protein 221 protein-coding chr14-3081 chr14 63223259 63223469 + 8.13 0.000 intron (NM_020663, intron 1 of 4) intron (NM_020663, intron 1 of 4) 18921 NM_020663 57381 Hs.656339 NM_020663 ENSG00000126785 RHOJ ARHJ|RASL7B|TC10B|TCL ras homolog family member J protein-coding chr17-4551 chr17 79224537 79224747 + 8.13 0.000 intron (NM_001350453, intron 3 of 13) L3b|LINE|CR1 149705 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr12-3555 chr12 3475782 3475992 + 8.13 0.000 intron (NM_001256536, intron 1 of 9) intron (NM_001256536, intron 1 of 9) -15316 NM_019854 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr17-2180 chr17 62913312 62913522 + 8.13 0.000 Intergenic AluSx3|SINE|Alu -30798 NR_030363 693218 NR_030363 ENSG00000207552 MIR633 MIRN633|hsa-mir-633 microRNA 633 ncRNA chr15-2112 chr15 69332404 69332614 + 8.13 0.000 intron (NM_001104554, intron 1 of 8) HUERS-P1-int|LTR|ERV1 18106 NM_001104554 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chr5-6802 chr5 96839713 96839923 + 8.13 0.000 Intergenic L2c|LINE|L2 -25673 NM_001198541 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr2-13356 chr2 135913944 135914154 + 8.13 0.000 intron (NM_001293312, intron 11 of 14) intron (NM_001293312, intron 11 of 14) -37606 NM_005915 4175 Hs.444118 NM_005915 ENSG00000076003 MCM6 MCG40308|Mis5|P105MCM minichromosome maintenance complex component 6 protein-coding chr3-8142 chr3 29081317 29081527 + 8.13 0.000 Intergenic Intergenic 199517 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr2-8636 chr2 145230849 145231059 + 8.13 0.000 Intergenic Intergenic 562987 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chrX-2332 chrX 57245241 57245451 + 8.13 0.000 Intergenic L1P3|LINE|L1 -41331 NM_174912 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding chr6-7355 chr6 47743793 47744003 + 8.13 0.000 Intergenic L1ME4a|LINE|L1 -38141 NM_181744 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chrX-4291 chrX 42402299 42402509 + 8.13 0.000 Intergenic Intergenic 375759 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr18-1833 chr18 22197604 22197814 + 8.13 0.000 intron (NM_005257, intron 6 of 6) intron (NM_005257, intron 6 of 6) 28272 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr12-7576 chr12 76010783 76010993 + 8.13 0.000 Intergenic Intergenic 20888 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr20-3463 chr20 54615144 54615354 + 8.13 0.000 intron (NM_018431, intron 6 of 7) intron (NM_018431, intron 6 of 7) 139656 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr10-4504 chr10 86940789 86940999 + 8.13 0.000 intron (NM_024756, intron 6 of 6) intron (NM_024756, intron 6 of 6) -14865 NM_001330120 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chr4-6458 chr4 141807325 141807535 + 8.13 0.000 Intergenic Intergenic 170847 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr8-2604 chr8 55946006 55946216 + 8.13 0.000 intron (NM_002350, intron 2 of 12) intron (NM_002350, intron 2 of 12) -43256 NR_145767 109617001 NR_145767 ENSG00000199405 SNORA1B - small nucleolar RNA, H/ACA box 1B snoRNA chr17-7099 chr17 71557273 71557483 + 8.13 0.000 Intergenic L2a|LINE|L2 -355199 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr22-1671 chr22 43848691 43848901 + 8.13 0.000 intron (NM_014351, intron 1 of 6) intron (NM_014351, intron 1 of 6) 13717 NM_014351 25830 Hs.189810 NM_014351 ENSG00000130540 SULT4A1 BR-STL-1|BRSTL1|DJ388M5.3|NST|SULTX3|hBR-STL-1 sulfotransferase family 4A member 1 protein-coding chr7-4735 chr7 56472325 56472535 + 8.13 0.000 Intergenic Intergenic 10889 NR_108095 100240728 Hs.292105 NR_108095 ENSG00000225488 LOC100240728 - uncharacterized LOC100240728 ncRNA chr3-11061 chr3 184058158 184058368 + 8.13 0.000 intron (NM_130770, intron 5 of 8) Charlie13b|DNA|hAT-Charlie 5216 NM_130770 170572 Hs.632579 NM_130770 ENSG00000178084 HTR3C - 5-hydroxytryptamine receptor 3C protein-coding chr13-3931 chr13 59434965 59435175 + 8.13 0.000 Intergenic L1PB1|LINE|L1 -577648 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr14-2714 chr14 90498686 90498896 + 8.13 0.000 Intergenic L2a|LINE|L2 18418 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr7-7181 chr7 7803246 7803456 + 8.13 0.000 intron (NM_001302350, intron 4 of 4) AluJr|SINE|Alu -84744 NM_002947 6119 Hs.487540 NM_002947 ENSG00000106399 RPA3 REPA3|RP-A p14 replication protein A3 protein-coding chr15-3816 chr15 75315151 75315361 + 8.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -20807 NM_001321847 54939 Hs.351327 NM_017828 ENSG00000140365 COMMD4 - COMM domain containing 4 protein-coding chr2-6503 chr2 185898647 185898857 + 8.13 0.000 Intergenic Intergenic -98601 NR_144454 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA chr6-4794 chr6 77644372 77644582 + 8.13 0.000 Intergenic Intergenic -5797 NM_001282136 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr2-6879 chr2 83812864 83813074 + 8.13 0.000 Intergenic Intergenic 290155 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr19-5825 chr19 40741459 40741669 + 8.13 0.000 TTS (NM_025194) TTS (NM_025194) 8913 NM_001353806 284325 Hs.585105 NM_198476 ENSG00000188493 C19orf54 - chromosome 19 open reading frame 54 protein-coding chr2-9136 chr2 209697260 209697470 + 8.13 0.000 intron (NM_001363910, intron 10 of 15) intron (NM_001363910, intron 10 of 15) -74467 NM_182587 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr6-1994 chr6 14713037 14713247 + 8.13 0.000 Intergenic Intergenic -427688 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr18-1391 chr18 58247553 58247763 + 8.13 0.000 intron (NM_001144965, intron 3 of 30) intron (NM_001144965, intron 3 of 30) 26087 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr11-3152 chr11 58627771 58627981 + 8.13 0.000 Intergenic Intergenic 5211 NM_000614 1270 Hs.524920 NM_000614 ENSG00000242689 CNTF HCNTF ciliary neurotrophic factor protein-coding chr3-3654 chr3 127246621 127246831 + 8.13 0.000 Intergenic PRIMA41-int|LTR|ERV1 41320 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr1-11448 chr1 79917654 79917864 + 8.13 0.000 Intergenic AluSc|SINE|Alu -617996 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr13-1492 chr13 111266700 111266910 + 8.13 0.000 intron (NM_001354061, intron 4 of 14) intron (NM_001354061, intron 4 of 14) 25631 NM_001354061 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr10-4751 chr10 2928277 2928487 + 8.13 0.000 Intergenic Intergenic 138551 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr1-7150 chr1 205292309 205292519 + 8.13 0.000 Intergenic FLAM_C|SINE|Alu 29331 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr19-2171 chr19 12717103 12717313 + 8.13 0.000 intron (NM_013433, intron 4 of 24) MIR|SINE|MIR 5051 NM_013433 30000 Hs.416049 NM_013433 ENSG00000105576 TNPO2 IPO3|KPNB2B|TRN2 transportin 2 protein-coding chr3-7846 chr3 114650914 114651124 + 8.13 0.000 intron (NM_001348803, intron 6 of 13) intron (NM_001348803, intron 6 of 13) -26074 NM_001164346 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr14-1974 chr14 39499520 39499730 + 8.13 0.000 Intergenic Intergenic -67125 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr16-6653 chr16 68757090 68757300 + 8.13 0.000 intron (NM_001317185, intron 2 of 15) AluSz|SINE|Alu 19903 NM_004360 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr5-6168 chr5 54458396 54458606 + 8.13 0.000 Intergenic LTR33|LTR|ERVL 2802 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr5-7580 chr5 41705367 41705577 + 8.13 0.000 Intergenic L1PA7|LINE|L1 138185 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr4-7398 chr4 63082811 63083021 + 8.13 0.000 Intergenic MLT2B3|LTR|ERVL -921151 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr7-4864 chr7 106346641 106346851 + 8.13 0.000 Intergenic Charlie6|DNA|hAT-Charlie -61763 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr15-2290 chr15 63039023 63039233 + 8.13 0.000 Intergenic Intergenic -3619 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr8-5712 chr8 130141143 130141353 + 8.13 0.000 intron (NM_001362925, intron 14 of 29) intron (NM_001362925, intron 14 of 29) -56480 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr9-2460 chr9 29257557 29257767 + 8.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -44061 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr19-3455 chr19 30392073 30392283 + 8.13 0.000 intron (NM_014717, intron 1 of 4) intron (NM_014717, intron 1 of 4) 19794 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr4-4403 chr4 43636460 43636670 + 8.13 0.000 Intergenic Intergenic -144022 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr10-6739 chr10 131125784 131125994 + 8.13 0.000 intron (NM_174937, intron 8 of 11) intron (NM_174937, intron 8 of 11) 30671 NR_120623 101927489 Hs.659317 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA chr1-15593 chr1 160657635 160657845 + 8.13 0.000 Intergenic Intergenic -10429 NM_001330754 6504 Hs.523660 NM_003037 ENSG00000117090 SLAMF1 CD150|CDw150|SLAM signaling lymphocytic activation molecule family member 1 protein-coding chr1-15194 chr1 109762907 109763117 + 8.13 0.000 intron (NM_133181, intron 1 of 18) intron (NM_133181, intron 1 of 18) 911 NM_133181 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr3-8766 chr3 3184959 3185169 + 8.13 0.000 Intergenic Intergenic -5347 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr19-6715 chr19 37796474 37796684 + 8.13 0.000 Intergenic SST1|Satellite|centr -16989 NM_152360 126231 Hs.531262 NM_152360 ENSG00000189144 ZNF573 - zinc finger protein 573 protein-coding chr22-1666 chr22 42554492 42554702 + 8.13 0.000 intron (NM_001284334, intron 1 of 9) MIRc|SINE|MIR 641 NM_014509 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr3-8127 chr3 24123601 24123811 + 8.13 0.000 intron (NM_001354708, intron 9 of 9) LTR85b|LTR|Gypsy? -20459 NR_026834 152024 Hs.385606 NR_026834 ENSG00000224074 LINC00691 - long intergenic non-protein coding RNA 691 ncRNA chr1-9806 chr1 59020413 59020623 + 8.13 0.000 promoter-TSS (NR_110626) promoter-TSS (NR_110626) 42 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr6-6291 chr6 39228829 39229039 + 8.13 0.000 exon (NM_003740, exon 1 of 5) exon (NM_003740, exon 1 of 5) 541 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding chr2-6548 chr2 216210497 216210707 + 8.13 0.000 Intergenic Intergenic -6287 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA chr3-9298 chr3 42976366 42976576 + 8.13 0.000 Intergenic Intergenic -2840 NM_001129908 729085 Hs.729533 NM_001129908 ENSG00000144649 GASK1A C3orf41|FAM198A golgi associated kinase 1A protein-coding chr3-5713 chr3 15458927 15459137 + 8.13 0.000 intron (NM_080539, intron 11 of 15) AluSz|SINE|Alu 31434 NM_033083 85403 Hs.716733 NM_033083 ENSG00000144597 EAF1 - ELL associated factor 1 protein-coding chr2-3654 chr2 162197300 162197510 + 8.13 0.000 intron (NM_004460, intron 16 of 25) intron (NM_004460, intron 16 of 25) -45158 NM_002054 2641 Hs.516494 NM_002054 ENSG00000115263 GCG GLP-1|GLP1|GLP2|GRPP glucagon protein-coding chr14-3728 chr14 30130046 30130256 + 8.13 0.000 Intergenic LTR33B|LTR|ERVL -202304 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr12-7590 chr12 77218334 77218544 + 8.13 0.000 Intergenic Intergenic -152870 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr17-3530 chr17 71985166 71985376 + 8.13 0.000 Intergenic Intergenic 40708 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA chr10-6429 chr10 20114847 20115057 + 8.13 0.000 intron (NM_032812, intron 4 of 13) L2c|LINE|L2 298520 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr13-2141 chr13 102569813 102570023 + 8.13 0.000 Intergenic Intergenic -27068 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr8-5899 chr8 16958170 16958380 + 8.13 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 44070 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr12-7122 chr12 46840916 46841126 + 8.13 0.000 Intergenic Intergenic -15024 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr21-1379 chr21 42527812 42528022 + 8.13 0.000 intron (NM_001320537, intron 3 of 19) intron (NM_001320537, intron 3 of 19) 14065 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr1-3295 chr1 247448171 247448381 + 8.13 0.000 intron (NM_001127462, intron 7 of 7) (T)n|Simple_repeat|Simple_repeat 3706 NM_001004492 127623 Hs.446999 NM_001004492 ENSG00000177535 OR2B11 - olfactory receptor family 2 subfamily B member 11 protein-coding GL383557.1-1 GL383557.1 38224 38396 + 8.13 0.000 NA NA NA NA chr14-4197 chr14 90546018 90546228 + 8.13 0.000 intron (NM_001320421, intron 20 of 20) intron (NM_001320421, intron 20 of 20) -28914 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr11-8696 chr11 5380843 5381053 + 8.13 0.000 intron (NM_001005567, intron 1 of 4) intron (NM_001005567, intron 1 of 4) -8429 NM_001004756 390059 Hs.553731 NM_001004756 ENSG00000184698 OR51M1 HOR5'Beta7|OR11-40 olfactory receptor family 51 subfamily M member 1 protein-coding chr2-4983 chr2 204145372 204145582 + 8.13 0.000 Intergenic Intergenic 208729 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr9-3253 chr9 16041073 16041283 + 8.13 0.000 Intergenic Intergenic 211929 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr2-10665 chr2 20903403 20903613 + 8.13 0.000 Intergenic Intergenic -80378 NM_001282719 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr21-1350 chr21 33871139 33871349 + 8.13 0.000 intron (NM_001331010, intron 32 of 38) L1ME4b|LINE|L1 44560 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr1-7681 chr1 20217934 20218144 + 8.13 0.000 Intergenic Intergenic -25056 NR_147205 105376827 Hs.559701 NR_147205 ENSG00000228105 LINC01757 - long intergenic non-protein coding RNA 1757 ncRNA chr12-7420 chr12 58919495 58919705 + 8.13 0.000 promoter-TSS (NM_001136051) promoter-TSS (NM_001136051) -54 NM_001136051 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr13-2378 chr13 40500180 40500390 + 8.13 0.000 Intergenic Intergenic -19279 NR_024505 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr10-6943 chr10 61190733 61190943 + 8.13 0.000 Intergenic MIR|SINE|MIR 174563 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr1-14517 chr1 50975665 50975875 + 8.13 0.000 Intergenic Intergenic 5525 NM_078626 1031 Hs.525324 NM_001262 ENSG00000123080 CDKN2C INK4C|p18|p18-INK4C cyclin dependent kinase inhibitor 2C protein-coding chr9-6956 chr9 101514137 101514347 + 8.13 0.000 Intergenic Intergenic -19611 NM_019592 56254 Hs.729085 NM_019592 ENSG00000155827 RNF20 BRE1|BRE1A|hBRE1 ring finger protein 20 protein-coding chr9-3645 chr9 93160092 93160302 + 8.13 0.000 Intergenic Intergenic -24733 NM_001282394 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr12-8016 chr12 112936561 112936771 + 8.13 0.000 Intergenic Intergenic -1808 NM_006187 4940 Hs.528634 NM_006187 ENSG00000111331 OAS3 p100|p100OAS 2'-5'-oligoadenylate synthetase 3 protein-coding chr10-9233 chr10 133008709 133008919 + 8.13 0.000 Intergenic Intergenic 43280 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA chr15-5306 chr15 101733412 101733622 + 8.13 0.000 Intergenic Intergenic -9044 NM_152334 123283 Hs.657163 NM_152334 ENSG00000185418 TARSL2 - threonyl-tRNA synthetase like 2 protein-coding chr17-4525 chr17 76141950 76142160 + 8.13 0.000 promoter-TSS (NM_001454) promoter-TSS (NM_001454) -810 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr22-4077 chr22 42894339 42894549 + 8.13 0.000 intron (NM_001349974, intron 1 of 9) AluSc|SINE|Alu -37171 NM_001142293 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr2-12163 chr2 39097451 39097661 + 8.13 0.000 intron (NM_005633, intron 1 of 22) AluSz|SINE|Alu 22907 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr10-4903 chr10 21399729 21399939 + 8.13 0.000 Intergenic Intergenic -26884 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr1-8673 chr1 212042291 212042501 + 8.13 0.000 intron (NM_001286229, intron 1 of 12) intron (NM_001286229, intron 1 of 12) 6648 NM_016448 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr2-13348 chr2 134983782 134983992 + 8.13 0.000 intron (NM_001018047, intron 6 of 8) intron (NM_001018047, intron 6 of 8) 39762 NM_001321177 80122 Hs.659395 NM_025052 ENSG00000176601 MAP3K19 RCK|YSK4 mitogen-activated protein kinase kinase kinase 19 protein-coding chr19-5878 chr19 45961907 45962117 + 8.13 0.000 intron (NM_002516, intron 1 of 3) L2a|LINE|L2 11853 NM_002516 4858 Hs.375439 NM_002516 ENSG00000104967 NOVA2 ANOVA|NOVA3 NOVA alternative splicing regulator 2 protein-coding chr4-4671 chr4 85191520 85191730 + 8.13 0.000 Intergenic L1PA6|LINE|L1 224141 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr17-1643 chr17 35089317 35089527 + 8.13 0.000 promoter-TSS (NR_037713) promoter-TSS (NR_037713) -196 NR_037713 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr3-7330 chr3 42667076 42667286 + 8.13 0.000 3' UTR (NM_145166, exon 6 of 6) 3' UTR (NM_145166, exon 6 of 6) -12793 NR_125400 101928323 NR_125400 LOC101928323 - uncharacterized LOC101928323 ncRNA chr19-5054 chr19 49836798 49837008 + 8.13 0.000 TTS (NM_030973) TTS (NM_030973) 4885 NR_106858 102465480 NR_106858 ENSG00000284114 MIR6800 hsa-mir-6800 microRNA 6800 ncRNA chr5-8357 chr5 120988987 120989197 + 8.13 0.000 Intergenic MER5A|DNA|hAT-Charlie -333458 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr4-6798 chr4 7658563 7658773 + 8.13 0.000 intron (NM_020777, intron 5 of 26) intron (NM_020777, intron 5 of 26) -95422 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr3-7870 chr3 127019583 127019793 + 8.13 0.000 intron (NM_032242, intron 19 of 30) intron (NM_032242, intron 19 of 30) 31094 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr15-2799 chr15 37101494 37101704 + 8.13 0.000 promoter-TSS (NM_001220482) promoter-TSS (NM_001220482) -288 NM_001220482 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr14-1235 chr14 102020212 102020422 + 8.13 0.000 intron (NM_001376, intron 42 of 77) intron (NM_001376, intron 42 of 77) 55744 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr2-9732 chr2 68831755 68831965 + 8.13 0.000 Intergenic Intergenic 39537 NM_014482 27302 Hs.158317 NM_014482 ENSG00000163217 BMP10 - bone morphogenetic protein 10 protein-coding chr2-9082 chr2 202746684 202746894 + 8.13 0.000 intron (NM_173511, intron 4 of 7) L1M2|LINE|L1 82445 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr11-5184 chr11 9594244 9594454 + 8.13 0.000 Intergenic MER1A|DNA|hAT-Charlie 19662 NM_001143976 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr6-6577 chr6 137968335 137968545 + 8.13 0.000 Intergenic Intergenic -22640 NR_149097 105378020 Hs.520420 NR_149097 ENSG00000226004 LINC02528 - long intergenic non-protein coding RNA 2528 ncRNA chr8-2911 chr8 143921438 143921648 + 8.13 0.000 exon (NM_201380, exon 32 of 32) exon (NM_201380, exon 32 of 32) 18054 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr10-6383 chr10 1120525 1120735 + 8.13 0.000 intron (NM_014023, intron 11 of 13) intron (NM_014023, intron 11 of 13) -39138 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr9-6294 chr9 135086207 135086417 + 8.13 0.000 promoter-TSS (NM_001282612) promoter-TSS (NM_001282612) -948 NM_001282612 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr9-6479 chr9 93294625 93294835 + 8.13 0.000 intron (NM_006648, intron 22 of 28) intron (NM_006648, intron 22 of 28) 51573 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr12-7610 chr12 79296933 79297143 + 8.13 0.000 intron (NM_001291901, intron 6 of 9) intron (NM_001291901, intron 6 of 9) -122219 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr8-6461 chr8 61652756 61652966 + 8.13 0.000 intron (NM_032468, intron 5 of 14) intron (NM_032468, intron 5 of 14) 36950 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr8-4266 chr8 93896481 93896691 + 8.13 0.000 Intergenic LTR88c|LTR|Gypsy? 19533 NR_039602 100616169 NR_039602 ENSG00000284288 MIR378D2 mir-378d-2 microRNA 378d-2 ncRNA chr5-3472 chr5 170534697 170534907 + 8.13 0.000 intron (NM_001278339, intron 1 of 7) AluJo|SINE|Alu 30782 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chrX-2827 chrX 136651982 136652192 + 8.13 0.000 intron (NM_000074, intron 2 of 4) intron (NM_000074, intron 2 of 4) 3910 NM_000074 959 Hs.592244 NM_000074 ENSG00000102245 CD40LG CD154|CD40L|HIGM1|IGM|IMD3|T-BAM|TNFSF5|TRAP|gp39|hCD40L CD40 ligand protein-coding chr2-6385 chr2 113772317 113772527 + 8.13 0.000 Intergenic AluYj4|SINE|Alu -15780 NM_001330316 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr4-5427 chr4 13833351 13833561 + 8.13 0.000 intron (NR_121681, intron 3 of 3) L3|LINE|CR1 178277 NR_121681 101929071 Hs.543714 NR_121681 ENSG00000250634 LINC01182 - long intergenic non-protein coding RNA 1182 ncRNA chr14-2293 chr14 60092505 60092715 + 8.13 0.000 intron (NM_022495, intron 1 of 9) intron (NM_022495, intron 1 of 9) 687 NM_001330177 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chrX-505 chrX 86653455 86653665 + 8.13 0.000 intron (NM_001139515, intron 4 of 11) L1PREC2|LINE|L1 390592 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr5-5007 chr5 82787446 82787656 + 8.13 0.000 Intergenic MLT2B1|LTR|ERVL -52604 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr20-1024 chr20 30405651 30405861 + 8.13 0.000 intron (NR_145491, intron 7 of 7) SVA_D|Retroposon|SVA -2294 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 MLLT10 pseudogene 1 pseudo chr20-2804 chr20 57040444 57040654 + 8.13 0.000 Intergenic MER5A|DNA|hAT-Charlie -173147 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr20-3647 chr20 9521191 9521401 + 8.13 0.000 intron (NM_001199897, intron 4 of 4) LTR55|LTR|ERVL? -6298 NR_109957 101929329 Hs.589878 NR_109957 ENSG00000225988 LAMP5-AS1 - LAMP5 antisense RNA 1 ncRNA chr6-7641 chr6 80931127 80931337 + 8.13 0.000 Intergenic Intergenic 821449 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr13-3633 chr13 30917180 30917390 + 8.13 0.000 intron (NM_032849, intron 1 of 4) intron (NM_032849, intron 1 of 4) 11014 NM_032849 84935 Hs.147880 NM_032849 ENSG00000102802 MEDAG AWMS3|C13orf33|MEDA-4|MEDA4|hAWMS3 mesenteric estrogen dependent adipogenesis protein-coding chr1-8226 chr1 27287743 27287953 + 8.13 0.000 exon (NM_015023, exon 6 of 16) exon (NM_015023, exon 6 of 16) -34297 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding chrX-3321 chrX 120377813 120378023 + 8.13 0.000 intron (NM_012069, intron 6 of 7) MER124|DNA?|DNA? 15829 NM_001142447 23439 Hs.292599 NM_012069 ENSG00000101892 ATP1B4 - ATPase Na+/K+ transporting family member beta 4 protein-coding chr8-2675 chr8 88147473 88147683 + 8.13 0.000 intron (NM_005941, intron 4 of 9) L1MEd|LINE|L1 179905 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr19-5540 chr19 51986309 51986519 + 8.13 0.000 intron (NM_021632, intron 1 of 4) intron (NM_021632, intron 1 of 4) 426 NM_021632 59348 Hs.407694 NM_021632 ENSG00000256683 ZNF350 ZBRK1|ZFQR zinc finger protein 350 protein-coding chr9-8819 chr9 134934688 134934898 + 8.13 0.000 Intergenic Intergenic -16881 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr7-3106 chr7 26195029 26195239 + 8.13 0.000 intron (NM_002137, intron 7 of 10) AluSg|SINE|Alu 5612 NM_031243 3181 Hs.487774 NM_002137 ENSG00000122566 HNRNPA2B1 HNRNPA2|HNRNPB1|HNRPA2|HNRPA2B1|HNRPB1|IBMPFD2|RNPA2|SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding chr4-3580 chr4 1949690 1949900 + 8.13 0.000 TTS (NM_133334) TTS (NM_133334) -24841 NR_003004 677770 Hs.676951 NR_003004 ENSG00000249784 SCARNA22 ACA11 small Cajal body-specific RNA 22 ncRNA chr11-6979 chr11 116181139 116181349 + 8.13 0.000 Intergenic Intergenic -421044 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr12-6435 chr12 87161195 87161405 + 8.13 0.000 Intergenic A-rich|Low_complexity|Low_complexity -169439 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chrX-4405 chrX 53114877 53115087 + 8.13 0.000 intron (NR_145974, intron 2 of 2) L1M3e|LINE|L1 20825 NR_145980 102723508 Hs.633244 NR_110456 KANTR LINC01155|Spasm KDM5C adjacent transcript ncRNA chr11-8620 chr11 2325823 2326033 + 8.13 0.000 Intergenic ERVL-B4-int|LTR|ERVL -22788 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr7-8939 chr7 96654666 96654876 + 8.13 0.000 intron (NR_038948, intron 2 of 4) MER47B|DNA|TcMar-Tigger 9567 NR_038948 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr3-5104 chr3 49387330 49387540 + 8.13 0.000 intron (NM_001664, intron 1 of 4) AluSc8|SINE|Alu 24541 NM_001313946 387 Hs.247077 NM_001664 ENSG00000067560 RHOA ARH12|ARHA|RHO12|RHOH12 ras homolog family member A protein-coding chr12-6902 chr12 23224459 23224669 + 8.13 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 48928 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr2-7936 chr2 60554062 60554272 + 8.13 0.000 promoter-TSS (NM_018014) promoter-TSS (NM_018014) -513 NM_022893 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr12-5024 chr12 84638955 84639165 + 8.13 0.000 Intergenic MIR|SINE|MIR 273739 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr19-5029 chr19 48558159 48558369 + 8.13 0.000 intron (NM_177973, intron 1 of 6) intron (NM_177973, intron 1 of 6) 6092 NM_177973 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr1-4196 chr1 65309718 65309928 + 8.13 0.000 exon (NM_001256864, exon 1 of 19) exon (NM_001256864, exon 1 of 19) 280 NM_001256864 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr1-16527 chr1 231484523 231484733 + 8.13 0.000 Intergenic MIR|SINE|MIR -8103 NR_033826 645339 Hs.382049 NR_033826 SNRPD2P2 - small nuclear ribonucleoprotein D2 pseudogene 2 pseudo chr12-5623 chr12 56396592 56396802 + 8.13 0.000 Intergenic MER52C|LTR|ERV1 -33840 NM_001638 319 Hs.534302 NM_001638 ENSG00000175336 APOF Apo-F|LTIP apolipoprotein F protein-coding chr15-4313 chr15 39629275 39629485 + 8.13 0.000 intron (NM_152597, intron 10 of 11) intron (NM_152597, intron 10 of 11) 48301 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr15-4832 chr15 73677276 73677486 + 8.13 0.000 Intergenic Intergenic -6900 NM_025240 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding chr1-4353 chr1 87335365 87335575 + 8.13 0.000 intron (NM_006769, intron 2 of 4) CpG 3726 NM_001369491 8543 Hs.436792 NM_006769 ENSG00000143013 LMO4 - LIM domain only 4 protein-coding chr1-4808 chr1 20535017 20535227 + 8.13 0.000 Intergenic L2a|LINE|L2 -17451 NM_207334 163933 Hs.429179 NM_207334 ENSG00000183114 FAM43B - family with sequence similarity 43 member B protein-coding chr3-9521 chr3 52137790 52138000 + 8.13 0.000 intron (NM_015426, intron 7 of 10) intron (NM_015426, intron 7 of 10) 16528 NM_001161580 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr6-3126 chr6 106039903 106040113 + 8.13 0.000 Intergenic Intergenic -46328 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr3-6309 chr3 76256458 76256668 + 8.13 0.000 Intergenic AluJb|SINE|Alu -471014 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr6-6383 chr6 75791711 75791921 + 8.13 0.000 intron (NM_001368139, intron 2 of 9) intron (NM_001368139, intron 2 of 9) 42577 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr15-2276 chr15 55917926 55918136 + 8.13 0.000 promoter-TSS (NM_001284338) promoter-TSS (NM_001284338) -900 NM_198400 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr3-3283 chr3 126390918 126391128 + 8.13 0.000 Intergenic Intergenic 3775 NR_103789 100506907 Hs.369473 NR_103787 ENSG00000249833 CCDC37-DT CCDC37-AS1 CCDC37 divergent transcript ncRNA chr8-5810 chr8 2855641 2855851 + 8.13 0.000 Intergenic (ATAT)n|Simple_repeat|Simple_repeat -127295 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr13-3950 chr13 61042345 61042555 + 8.13 0.000 Intergenic Intergenic 157430 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr18-2269 chr18 74789175 74789385 + 8.13 0.000 intron (NM_017757, intron 3 of 7) intron (NM_017757, intron 3 of 7) 158317 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr6-7085 chr6 33976892 33977102 + 8.13 0.000 Intergenic L2a|LINE|L2 23054 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr17-6036 chr17 78973217 78973427 + 8.13 0.000 intron (NM_005567, intron 4 of 5) intron (NM_005567, intron 4 of 5) 6601 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr6-6419 chr6 88114225 88114435 + 8.13 0.000 Intergenic Intergenic 31007 NM_033181 1268 Hs.75110 NM_016083 ENSG00000118432 CNR1 CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR cannabinoid receptor 1 protein-coding chr14-4090 chr14 66075102 66075312 + 8.13 0.000 Intergenic Intergenic -411164 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr2-8956 chr2 189093035 189093245 + 8.13 0.000 intron (NM_000393, intron 6 of 53) intron (NM_000393, intron 6 of 53) 39971 NR_036076 100422908 NR_036076 ENSG00000264725 MIR3129 mir-3129 microRNA 3129 ncRNA chr9-4229 chr9 77374386 77374596 + 8.13 0.000 intron (NM_001018038, intron 67 of 68) MER44B|DNA|TcMar-Tigger -73158 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr8-7102 chr8 118614471 118614681 + 8.13 0.000 intron (NR_109794, intron 1 of 4) intron (NR_109794, intron 1 of 4) -6425 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr6-7676 chr6 85421984 85422194 + 8.13 0.000 Intergenic Intergenic -17287 NR_134633 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr15-1672 chr15 41621237 41621447 + 8.13 0.000 Intergenic CpG -39070 NM_001164273 23269 Hs.187569 NM_001080541 ENSG00000174197 MGA MAD5|MXD5 MAX dimerization protein MGA protein-coding chr6-4318 chr6 16079368 16079578 + 8.13 0.000 Intergenic L1PA16|LINE|L1 -49613 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chrX-4238 chrX 38854338 38854548 + 8.13 0.000 Intergenic AluJb|SINE|Alu -50560 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr15-2633 chr15 69398524 69398734 + 8.13 0.000 intron (NR_132971, intron 1 of 1) intron (NR_132971, intron 1 of 1) -15720 NM_138555 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr16-4738 chr16 84444875 84445085 + 8.13 0.000 intron (NM_001291454, intron 12 of 23) MLT1C|LTR|ERVL-MaLR 22381 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr15-4573 chr15 59158889 59159099 + 8.13 0.000 intron (NM_004998, intron 24 of 27) intron (NM_004998, intron 24 of 27) 12268 NR_031750 100313886 NR_031750 ENSG00000253030 MIR2116 mir-2116 microRNA 2116 ncRNA chr15-5003 chr15 80918900 80919110 + 8.13 0.000 intron (NM_001293304, intron 14 of 29) MIR3|SINE|MIR 70814 NR_126327 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr2-14111 chr2 200993020 200993230 + 8.13 0.000 intron (NM_001321619, intron 8 of 11) L2a|LINE|L2 -29465 NR_033915 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr20-4334 chr20 53558426 53558636 + 8.13 0.000 intron (NR_110051, intron 2 of 5) AluJr4|SINE|Alu 5761 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr2-14552 chr2 230840727 230840937 + 8.13 0.000 Intergenic AluJo|SINE|Alu -23353 NM_001287241 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr1-9183 chr1 21315929 21316139 + 8.13 0.000 intron (NM_001113348, intron 1 of 18) MIRb|SINE|MIR 22744 NR_038404 100506801 Hs.663049 NR_038404 ENSG00000231105 LOC100506801 - uncharacterized LOC100506801 ncRNA chr9-5549 chr9 109698101 109698311 + 8.13 0.000 intron (NM_001037293, intron 1 of 6) intron (NM_001037293, intron 1 of 6) 57418 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr3-6540 chr3 118987902 118988112 + 8.13 0.000 intron (NM_001353319, intron 1 of 7) intron (NM_001353319, intron 1 of 7) 44931 NR_046230 100506765 Hs.660823 NR_046230 ENSG00000239877 IGSF11-AS1 - IGSF11 antisense RNA 1 ncRNA chr7-8087 chr7 25255883 25256093 + 8.13 0.000 Intergenic Intergenic -27502 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr14-4888 chr14 72117709 72117919 + 8.13 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 184287 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr9-4670 chr9 121794473 121794683 + 8.13 0.000 Intergenic HERVH-int|LTR|ERV1 51793 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr17-7273 chr17 3384122 3384332 + 8.13 0.000 Intergenic Intergenic 14183 NM_003553 8387 NM_003553 ENSG00000180016 OR1E1 HGM071|OR13-66|OR17-2|OR17-32|OR1E5|OR1E6|OR1E8P|OR1E9P|OST547 olfactory receptor family 1 subfamily E member 1 protein-coding chr11-5297 chr11 44880594 44880804 + 8.13 0.000 intron (NM_130783, intron 3 of 9) intron (NM_130783, intron 3 of 9) 69461 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr13-2060 chr13 52069586 52069796 + 8.13 0.000 intron (NM_199289, intron 21 of 21) L2c|LINE|L2 45000 NM_021645 9724 Hs.512963 NM_021645 ENSG00000253797 UTP14C 2700066J21Rik|KIAA0266|UTP14B UTP14C small subunit processome component protein-coding chr12-2796 chr12 88639411 88639621 + 8.13 0.000 Intergenic Intergenic -59043 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr4-1493 chr4 40721395 40721605 + 8.13 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -28455 NM_001330648 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr5-8017 chr5 87967326 87967536 + 8.13 0.000 Intergenic L1PB1|LINE|L1 301414 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding chr17-4376 chr17 19417783 19417993 + 8.13 0.000 TTS (NM_007148) TTS (NM_007148) 6656 NM_007148 7732 Hs.189482 NM_007148 ENSG00000128482 RNF112 BFP|ZNF179 ring finger protein 112 protein-coding chr1-15914 chr1 185496010 185496220 + 8.13 0.000 Intergenic Intergenic 132373 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr15-3545 chr15 101330332 101330542 + 8.13 0.000 intron (NM_138319, intron 14 of 20) intron (NM_138319, intron 14 of 20) -4000 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr19-4653 chr19 16309592 16309802 + 8.13 0.000 Intergenic Intergenic -15129 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr1-11790 chr1 24312845 24313055 + 8.13 0.000 Intergenic Intergenic -6407 NM_198174 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr2-6327 chr2 73291090 73291300 + 8.13 0.000 3' UTR (NM_001965, exon 2 of 2) 3' UTR (NM_001965, exon 2 of 2) 2353 NM_001965 1961 Hs.3052 NM_001965 ENSG00000135625 EGR4 AT133|NGFI-C|NGFIC|PAT133 early growth response 4 protein-coding chrX-3411 chrX 10757712 10757922 + 8.13 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) 75866 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr9-4531 chr9 74581860 74582070 + 8.13 0.000 intron (NM_006914, intron 1 of 9) intron (NM_006914, intron 1 of 9) -33569 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr3-9141 chr3 31945594 31945804 + 8.13 0.000 intron (NM_001174060, intron 1 of 10) intron (NM_001174060, intron 1 of 10) -36051 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr20-2043 chr20 3103485 3103695 + 8.13 0.000 Intergenic Intergenic -3321 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chr2-5000 chr2 218423844 218424054 + 8.13 0.000 intron (NM_007127, intron 2 of 19) intron (NM_007127, intron 2 of 19) 4826 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding chr7-7334 chr7 47748279 47748489 + 8.13 0.000 Intergenic Intergenic -13092 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr11-9255 chr11 43282824 43283034 + 8.13 0.000 Intergenic MIRb|SINE|MIR -13560 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo chr15-2952 chr15 48797331 48797541 + 8.13 0.000 exon (NM_001194998, exon 5 of 27) exon (NM_001194998, exon 5 of 27) 13633 NM_001194998 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr13-2943 chr13 38721358 38721568 + 8.13 0.000 intron (NM_207361, intron 2 of 23) intron (NM_207361, intron 2 of 23) 34386 NM_207361 341640 Hs.253994 NM_207361 ENSG00000150893 FREM2 CRYPTOP|FRASRS2 FRAS1 related extracellular matrix 2 protein-coding chr7-9606 chr7 149125326 149125536 + 8.13 0.000 promoter-TSS (NM_020781) promoter-TSS (NM_020781) 893 NM_001001661 155054 Hs.31743 NM_001001661 ENSG00000204947 ZNF425 - zinc finger protein 425 protein-coding chr15-3770 chr15 64927186 64927396 + 8.13 0.000 intron (NM_182703, intron 6 of 14) intron (NM_182703, intron 6 of 14) 15389 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr2-10811 chr2 47881294 47881504 + 8.13 0.000 intron (NM_001190274, intron 1 of 22) L1M7|LINE|L1 7320 NM_025133 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr10-4575 chr10 107741211 107741421 + 8.13 0.000 Intergenic Intergenic 327977 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr8-3949 chr8 47478488 47478698 + 8.13 0.000 intron (NM_001080394, intron 8 of 19) intron (NM_001080394, intron 8 of 19) -175495 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr3-6289 chr3 73114626 73114836 + 8.13 0.000 Intergenic Intergenic 53072 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr17-6602 chr17 57163951 57164161 + 8.13 0.000 Intergenic Intergenic 68567 NM_001370427 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr8-2982 chr8 94387976 94388186 + 8.13 0.000 intron (NM_012415, intron 10 of 14) intron (NM_012415, intron 10 of 14) 48863 NM_001256141 100861412 Hs.30561 NM_001256141 ENSG00000265817 FSBP - fibrinogen silencer binding protein protein-coding chr10-4155 chr10 86314983 86315193 + 8.13 0.000 intron (NM_017551, intron 2 of 15) MIRb|SINE|MIR -50300 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chrX-1010 chrX 44775799 44776009 + 8.13 0.000 Intergenic Intergenic -68117 NM_022076 63904 Hs.534478 NM_022076 ENSG00000189037 DUSP21 LMWDSP21 dual specificity phosphatase 21 protein-coding chr5-6085 chr5 11927531 11927741 + 8.13 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -23190 NM_001332 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr21-896 chr21 16534351 16534561 + 8.13 0.000 intron (NR_136546, intron 2 of 2) intron (NR_136546, intron 2 of 2) -1116 NR_136547 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr11-6679 chr11 76735373 76735583 + 8.13 0.000 Intergenic Intergenic -13689 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr3-4760 chr3 102158370 102158580 + 8.13 0.000 Intergenic MIR|SINE|MIR -5230 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr7-3503 chr7 5113094 5113304 + 8.13 0.000 Intergenic Intergenic 31347 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr8-2395 chr8 56559259 56559469 + 8.13 0.000 intron (NR_038236, intron 1 of 2) MIR|SINE|MIR 459 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr4-2237 chr4 149415402 149415612 + 8.13 0.000 intron (NM_001363507, intron 13 of 13) intron (NM_001363507, intron 13 of 13) 261212 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr5-3251 chr5 98414898 98415108 + 8.13 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -253764 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr18-1201 chr18 31611092 31611302 + 8.13 0.000 Intergenic Intergenic 19430 NM_000371 7276 Hs.427202 NM_000371 ENSG00000118271 TTR ATTR|CTS|CTS1|HEL111|HsT2651|PALB|TBPA transthyretin protein-coding chr16-2626 chr16 3876782 3876992 + 8.13 0.000 intron (NM_004380, intron 1 of 30) intron (NM_004380, intron 1 of 30) 3233 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr5-2167 chr5 112958577 112958787 + 8.13 0.000 Intergenic Intergenic -18116 NR_038352 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr6-6780 chr6 3843955 3844165 + 8.13 0.000 Intergenic Intergenic -5313 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr8-2254 chr8 67902161 67902371 + 8.13 0.000 Intergenic LTR33|LTR|ERVL -49780 NM_024870 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr7-8913 chr7 94421622 94421832 + 8.13 0.000 intron (NM_000089, intron 38 of 51) intron (NM_000089, intron 38 of 51) 27166 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr21-1422 chr21 16195617 16195827 + 8.13 0.000 intron (NR_136543, intron 1 of 4) intron (NR_136543, intron 1 of 4) 1343 NR_136543 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr14-2366 chr14 32525859 32526069 + 8.13 0.000 intron (NM_004274, intron 2 of 13) intron (NM_004274, intron 2 of 13) 196666 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr10-4878 chr10 17294347 17294557 + 8.13 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR -64467 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr11-10514 chr11 119377767 119377977 + 8.13 0.000 intron (NM_004205, intron 1 of 12) intron (NM_004205, intron 1 of 12) 3818 NM_004205 9099 Hs.524085 NM_004205 ENSG00000036672 USP2 UBP41|USP9 ubiquitin specific peptidase 2 protein-coding chr1-11410 chr1 54697430 54697640 + 8.13 0.000 intron (NM_001039464, intron 17 of 23) intron (NM_001039464, intron 17 of 23) -18287 NM_001291333 7268 Hs.412482 NM_004623 ENSG00000243725 TTC4 CNS1 tetratricopeptide repeat domain 4 protein-coding chr5-6690 chr5 63177940 63178150 + 8.13 0.000 Intergenic Intergenic 599226 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr7-4577 chr7 7861308 7861518 + 8.13 0.000 intron (NM_001302350, intron 4 of 4) intron (NM_001302350, intron 4 of 4) 107339 NR_110018 100505921 Hs.634989 NR_110018 LOC100505921 - uncharacterized LOC100505921 ncRNA chr15-4931 chr15 77914465 77914675 + 8.13 0.000 non-coding (NR_027024, exon 18 of 18) non-coding (NR_027024, exon 18 of 18) 12276 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr13-2576 chr13 69474331 69474541 + 8.13 0.000 Intergenic Intergenic 252090 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr7-9081 chr7 105245485 105245695 + 8.13 0.000 intron (NM_182692, intron 2 of 15) intron (NM_182692, intron 2 of 15) 23487 NM_001350739 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr2-7220 chr2 219358194 219358404 + 8.13 0.000 Intergenic CpG -25122 NM_001007089 389075 Hs.290551 NM_001007089 ENSG00000182698 RESP18 - regulated endocrine specific protein 18 protein-coding chr11-9421 chr11 59438345 59438555 + 8.13 0.000 Intergenic Intergenic -4719 NM_001004728 219982 Hs.553649 NM_001004728 ENSG00000172320 OR5A1 OR11-249|OR5A1P|OST181 olfactory receptor family 5 subfamily A member 1 protein-coding chr7-7223 chr7 22289768 22289978 + 8.13 0.000 intron (NM_012294, intron 6 of 25) THE1D|LTR|ERVL-MaLR 67281 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding KI270725.1-1 KI270725.1 86467 86677 + 8.13 0.000 NA NA NA NA chr10-6535 chr10 69683315 69683525 + 8.13 0.000 Intergenic L2b|LINE|L2 53173 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr12-3201 chr12 53867566 53867776 + 8.13 0.000 Intergenic Intergenic -71160 NM_017410 3229 Hs.118608 NM_017410 ENSG00000123364 HOXC13 ECTD9|HOX3|HOX3G homeobox C13 protein-coding chr6-8126 chr6 128705696 128705906 + 8.13 0.000 Intergenic Intergenic -177337 NM_001079823 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr11-10230 chr11 99205182 99205392 + 8.13 0.000 intron (NM_001243270, intron 1 of 23) intron (NM_001243270, intron 1 of 23) 184338 NM_001243270 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr3-6519 chr3 114223262 114223472 + 8.13 0.000 Intergenic Intergenic 14211 NM_007136 7634 Hs.271079 NM_007136 ENSG00000174255 ZNF80 pT17 zinc finger protein 80 protein-coding chr6-7111 chr6 34858612 34858822 + 8.13 0.000 exon (NM_017754, exon 14 of 21) exon (NM_017754, exon 14 of 21) 29325 NM_005643 6882 Hs.112444 NM_005643 ENSG00000064995 TAF11 MGC:15243|PRO2134|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding chr11-6602 chr11 73226832 73227042 + 8.13 0.000 intron (NM_176071, intron 1 of 2) L1PA7|LINE|L1 8375 NM_176071 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr15-4817 chr15 73279750 73279960 + 8.13 0.000 intron (NM_002499, intron 22 of 28) intron (NM_002499, intron 22 of 28) -20055 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr15-3222 chr15 73472896 73473106 + 8.13 0.000 intron (NM_001042367, intron 1 of 5) L3|LINE|CR1 29837 NM_001348772 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chr22-1741 chr22 22086388 22086598 + 8.13 0.000 Intergenic Intergenic -42559 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr4-4430 chr4 51980077 51980287 + 8.13 0.000 Intergenic Intergenic 40181 NM_001024611 339977 Hs.661450 NM_001024611 ENSG00000188993 LRRC66 - leucine rich repeat containing 66 protein-coding chr18-3090 chr18 34377179 34377389 + 8.13 0.000 Intergenic Intergenic -116006 NM_032975 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr7-7628 chr7 135390128 135390338 + 8.13 0.000 intron (NM_001190848, intron 10 of 10) MIR3|SINE|MIR 119869 NM_013316 4850 Hs.490224 NM_013316 ENSG00000080802 CNOT4 CLONE243|NOT4|NOT4H CCR4-NOT transcription complex subunit 4 protein-coding chrX-3679 chrX 105137239 105137449 + 8.13 0.000 intron (NM_017416, intron 2 of 10) MER3|DNA|hAT-Charlie 83349 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chrX-5330 chrX 146282032 146282242 + 8.13 0.000 Intergenic Intergenic -254265 NR_030581 100126341 NR_030581 ENSG00000216056 MIR891A MIRN891A microRNA 891a ncRNA chr3-8770 chr3 3742264 3742474 + 8.13 0.000 intron (NR_149025, intron 5 of 5) LTR16C|LTR|ERVL -57062 NM_001324189 57633 Hs.163244 NM_020873 ENSG00000175928 LRRN1 FIGLER3|NLRR-1 leucine rich repeat neuronal 1 protein-coding chr15-4944 chr15 78247090 78247300 + 8.13 0.000 Intergenic Intergenic -12630 NM_001199377 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr6-5407 chr6 155199977 155200187 + 8.13 0.000 intron (NM_012454, intron 13 of 25) intron (NM_012454, intron 13 of 25) -16884 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr10-6703 chr10 122540539 122540749 + 8.13 0.000 Intergenic L2c|LINE|L2 -20021 NM_004406 1755 Hs.279611 NM_004406 ENSG00000187908 DMBT1 GP340|SAG|SALSA|muclin deleted in malignant brain tumors 1 protein-coding chr14-1380 chr14 34436738 34436948 + 8.13 0.000 intron (NM_138288, intron 1 of 1) intron (NM_138288, intron 1 of 1) 25397 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr16-6426 chr16 56347873 56348083 + 8.13 0.000 3' UTR (NM_138736, exon 8 of 8) 3' UTR (NM_138736, exon 8 of 8) 77011 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr21-1103 chr21 34756440 34756650 + 8.13 0.000 intron (NR_038885, intron 1 of 2) intron (NR_038885, intron 1 of 2) 10720 NR_038886 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA chr8-1658 chr8 20186922 20187132 + 8.13 0.000 Intergenic Intergenic -3821 NM_001135691 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr12-5395 chr12 121036936 121037146 + 8.13 0.000 intron (NM_198213, intron 1 of 4) intron (NM_198213, intron 1 of 4) 2201 NM_003733 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr19-4136 chr19 19552917 19553127 + 8.13 0.000 Intergenic Intergenic 14757 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr9-7567 chr9 35738270 35738480 + 8.13 0.000 intron (NM_020944, intron 13 of 16) intron (NM_020944, intron 13 of 16) 5453 NR_106912 102466201 NR_106912 ENSG00000273945 MIR6853 hsa-mir-6853 microRNA 6853 ncRNA chr1-10976 chr1 215528866 215529076 + 8.13 0.000 Intergenic Intergenic -38333 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr10-6784 chr10 3125522 3125732 + 8.13 0.000 intron (NM_001242339, intron 18 of 23) intron (NM_001242339, intron 18 of 23) -8477 NR_132758 106633806 NR_132758 SNORD142 SNORA85|SNORD174|ZL68 small nucleolar RNA, C/D box 142 snoRNA chr18-1617 chr18 46860358 46860568 + 8.13 0.000 intron (NR_148699, intron 2 of 11) L1MC4a|LINE|L1 57044 NM_001324057 9063 Hs.57769 NM_004671 ENSG00000078043 PIAS2 ARIP3|DIP|MIZ1|PIASX|SIZ2|ZMIZ4 protein inhibitor of activated STAT 2 protein-coding chr1-15701 chr1 169086596 169086806 + 8.13 0.000 intron (NR_104091, intron 1 of 4) intron (NR_104091, intron 1 of 4) 304 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr9-7958 chr9 91440455 91440665 + 8.13 0.000 Intergenic L1MA9|LINE|L1 -15934 NM_001290000 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr3-5865 chr3 34986846 34987056 + 8.13 0.000 intron (NR_110817, intron 2 of 3) (AT)n|Simple_repeat|Simple_repeat 407072 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr7-4482 chr7 140348451 140348661 + 8.13 0.000 intron (NM_001287498, intron 10 of 13) intron (NM_001287498, intron 10 of 13) 49974 NM_001363375 84255 Hs.446021 NM_032295 ENSG00000157800 SLC37A3 - solute carrier family 37 member 3 protein-coding chr3-10348 chr3 127660215 127660425 + 8.13 0.000 intron (NM_015720, intron 2 of 7) intron (NM_015720, intron 2 of 7) -12618 NR_033429 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr12-7432 chr12 60939671 60939881 + 8.13 0.000 Intergenic Intergenic 1250406 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr10-6983 chr10 69639974 69640184 + 8.13 0.000 Intergenic Intergenic 9832 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr4-4146 chr4 7878435 7878645 + 8.13 0.000 intron (NM_198595, intron 1 of 16) intron (NM_198595, intron 1 of 16) -6232 NM_001371090 chr4-3303 chr4 153788543 153788753 + 8.13 0.000 exon (NM_003013, exon 1 of 3) exon (NM_003013, exon 1 of 3) 435 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr9-4709 chr9 126724827 126725037 + 8.13 0.000 Intergenic Intergenic -80074 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr10-4781 chr10 5632834 5633044 + 8.13 0.000 Intergenic Intergenic 33656 NR_037164 79754 Hs.445899 NM_024701 ENSG00000196372 ASB13 - ankyrin repeat and SOCS box containing 13 protein-coding chr7-8383 chr7 44920827 44921037 + 8.13 0.000 Intergenic AluSz|SINE|Alu -35402 NM_033224 5814 Hs.349150 NM_033224 ENSG00000146676 PURB PURBETA purine rich element binding protein B protein-coding chr3-2893 chr3 48782294 48782504 + 8.13 0.000 intron (NM_001321982, intron 5 of 11) intron (NM_001321982, intron 5 of 11) -65121 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr2-10633 chr2 12787945 12788155 + 8.13 0.000 Intergenic Intergenic 50683 NR_036072 100422986 NR_036072 ENSG00000264370 MIR3125 mir-3125 microRNA 3125 ncRNA chr10-4599 chr10 113651132 113651342 + 8.13 0.000 intron (NM_001322945, intron 7 of 40) intron (NM_001322945, intron 7 of 40) 12804 NM_198060 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr15-4532 chr15 55533753 55533963 + 8.13 0.000 Intergenic L1MCc|LINE|L1 -25624 NM_001033560 161582 Hs.126403 NM_130810 ENSG00000256061 DNAAF4 CILD25|DYX1|DYX1C1|DYXC1|EKN1|RD dynein axonemal assembly factor 4 protein-coding chr8-4694 chr8 140036697 140036907 + 8.13 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 63733 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr18-1297 chr18 63676662 63676872 + 8.13 0.000 Intergenic Intergenic -14874 NM_006919 6317 Hs.227948 NM_006919 ENSG00000057149 SERPINB3 HsT1196|SCC|SCCA-1|SCCA-PD|SCCA1|SSCA1|T4-A serpin family B member 3 protein-coding chr8-1688 chr8 70784650 70784860 + 8.13 0.000 Intergenic L1MA7|LINE|L1 115416 NM_001287259 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr9-5330 chr9 87850568 87850778 + 8.13 0.000 Intergenic Intergenic 5928 NR_033405 1518 Hs.726015 NR_033405 CTSLP8 CTSL1P8 cathepsin L pseudogene 8 pseudo chr4-3630 chr4 13483725 13483935 + 8.13 0.000 intron (NM_001017979, intron 1 of 6) intron (NM_001017979, intron 1 of 6) 510 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr10-3383 chr10 26303432 26303642 + 8.13 0.000 3' UTR (NM_001134366, exon 16 of 16) 3' UTR (NM_001134366, exon 16 of 16) 86763 NM_001134366 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr9-7274 chr9 6568299 6568509 + 8.13 0.000 intron (NM_000170, intron 15 of 24) intron (NM_000170, intron 15 of 24) 77288 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr19-1833 chr19 5775391 5775601 + 8.13 0.000 intron (NM_152784, intron 20 of 21) AluY|SINE|Alu 9250 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chr14-2263 chr14 21002963 21003173 + 8.13 0.000 Intergenic PABL_A|LTR|ERV1 3775 NM_001256588 29986 Hs.175783 NM_014579 ENSG00000165794 SLC39A2 6A1|ETI-1|ZIP-2|ZIP2 solute carrier family 39 member 2 protein-coding chr10-4577 chr10 108360504 108360714 + 8.13 0.000 Intergenic Intergenic -291316 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr1-9201 chr1 22212175 22212385 + 8.13 0.000 Intergenic L2b|LINE|L2 -53959 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr3-4484 chr3 53056674 53056884 + 8.13 0.000 Intergenic Intergenic -10706 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr7-6578 chr7 77415854 77416064 + 8.13 0.000 intron (NR_110073, intron 1 of 4) CpG 390 NM_001350899 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr2-13840 chr2 176806335 176806545 + 8.13 0.000 Intergenic Intergenic 168686 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr8-3841 chr8 30969548 30969758 + 8.01 0.000 Intergenic AluJr4|SINE|Alu -56645 NM_001350162 56154 Hs.458316 NM_001350162 ENSG00000133863 TEX15 CT42|SPGF25 testis expressed 15, meiosis and synapsis associated protein-coding chr8-3117 chr8 54632902 54633112 + 8.01 0.000 Intergenic Intergenic 16911 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr1-16306 chr1 215892729 215892939 + 8.01 0.000 intron (NM_206933, intron 40 of 71) intron (NM_206933, intron 40 of 71) -179631 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr4-8454 chr4 155402574 155402784 + 8.01 0.000 Intergenic Intergenic -25714 NM_001039580 79884 Hs.61271 NM_001039580 ENSG00000164114 MAP9 ASAP microtubule associated protein 9 protein-coding chr7-8740 chr7 76754381 76754591 + 8.01 0.000 Intergenic MIRb|SINE|MIR -127183 NM_152992 22932 Hs.488877 NM_012230 ENSG00000146707 POMZP3 POM-ZP3|POM121 POM121 and ZP3 fusion protein-coding chr1-11183 chr1 240957961 240958171 + 8.01 0.000 intron (NM_001350116, intron 4 of 16) intron (NM_001350116, intron 4 of 16) -174206 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr20-2510 chr20 34142866 34143076 + 8.01 0.000 Intergenic L1P4a|LINE|L1 -30728 NM_001316363 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr19-5381 chr19 10151839 10152049 + 8.01 0.000 intron (NM_001379, intron 21 of 39) AluSq2|SINE|Alu -32045 NM_003755 8666 Hs.529059 NM_003755 ENSG00000130811 EIF3G EIF3-P42|EIF3S4|eIF3-delta|eIF3-p44 eukaryotic translation initiation factor 3 subunit G protein-coding chr10-4968 chr10 29377425 29377635 + 8.01 0.000 Intergenic Intergenic -32004 NR_110926 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr2-12533 chr2 66004768 66004978 + 8.01 0.000 Intergenic Intergenic 353455 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chrX-5433 chrX 153744472 153744682 + 8.01 0.000 3' UTR (NM_000033, exon 10 of 10) 3' UTR (NM_000033, exon 10 of 10) -19619 NM_001163257 5365 Hs.632833 NM_005393 ENSG00000198753 PLXNB3 PLEXB3|PLEXR|PLXN6 plexin B3 protein-coding chr16-6298 chr16 46876499 46876709 + 8.01 0.000 Intergenic Intergenic -7758 NM_133443 84706 Hs.460693 NM_133443 ENSG00000166123 GPT2 ALT2|GPT 2|MRT49 glutamic--pyruvic transaminase 2 protein-coding chr17-6080 chr17 80315899 80316109 + 8.01 0.000 intron (NM_020954, intron 15 of 16) intron (NM_020954, intron 15 of 16) 55152 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr12-8047 chr12 114798932 114799142 + 8.01 0.000 Intergenic AluSx|SINE|Alu -114862 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr15-4369 chr15 41917238 41917448 + 8.01 0.000 intron (NM_139265, intron 4 of 5) AluSg|SINE|Alu -4074 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr12-5655 chr12 82775302 82775512 + 8.01 0.000 intron (NM_001320321, intron 1 of 10) AluJo|SINE|Alu 88252 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-9476 chr2 235563623 235563833 + 8.01 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -45807 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chrX-4426 chrX 54181234 54181444 + 8.01 0.000 intron (NM_198456, intron 1 of 1) intron (NM_198456, intron 1 of 1) 1915 NM_017848 54954 Hs.86045 NM_017848 ENSG00000184083 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding chr12-6079 chr12 120925735 120925945 + 8.01 0.000 Intergenic Intergenic 21145 NR_131215 105500240 Hs.742757 NR_131215 XLOC_009911 - uncharacterized LOC105500240 ncRNA chr18-1851 chr18 24149966 24150176 + 8.01 0.000 intron (NM_012189, intron 3 of 5) LTR12C|LTR|ERV1 10587 NM_138644 26256 Hs.511983 NM_012189 ENSG00000154040 CABYR CABYRa|CABYRc|CABYRc/d|CABYRe|CBP86|CT88|FSP-2|FSP2 calcium binding tyrosine phosphorylation regulated protein-coding chr3-8529 chr3 140797109 140797319 + 8.01 0.000 Intergenic AluSx|SINE|Alu 119150 NM_152616 287015 Hs.343487 NM_152616 ENSG00000155890 TRIM42 PPP1R40|T4A1 tripartite motif containing 42 protein-coding chr15-4272 chr15 35840211 35840421 + 8.01 0.000 intron (NR_038251, intron 2 of 2) intron (NR_038251, intron 2 of 2) -86540 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr6-3977 chr6 108797835 108798045 + 8.01 0.000 Intergenic Intergenic 46286 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr4-4472 chr4 55508986 55509196 + 8.01 0.000 intron (NM_004898, intron 2 of 22) Tigger3a|DNA|TcMar-Tigger 36841 NM_001267843 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr20-1906 chr20 62668562 62668772 + 8.01 0.000 intron (NM_016354, intron 10 of 11) intron (NM_016354, intron 10 of 11) -2046 NR_024470 100127888 Hs.671273 NR_024470 ENSG00000232803 SLCO4A1-AS1 - SLCO4A1 antisense RNA 1 ncRNA chrX-5339 chrX 147894499 147894709 + 8.01 0.000 Intergenic Intergenic 17213 NR_024499 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr16-6308 chr16 48087329 48087539 + 8.01 0.000 intron (NM_033226, intron 25 of 28) intron (NM_033226, intron 25 of 28) 59336 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr3-5017 chr3 28071756 28071966 + 8.01 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -169758 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr15-3838 chr15 79172156 79172366 + 8.01 0.000 Intergenic MIR1_Amn|SINE|MIR -37527 NR_029705 406960 NR_029705 ENSG00000207695 MIR184 EDICT|MIRN184|miR-184 microRNA 184 ncRNA chr12-5107 chr12 96352409 96352619 + 8.01 0.000 intron (NM_002595, intron 1 of 16) intron (NM_002595, intron 1 of 16) 47925 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr16-4689 chr16 80466362 80466572 + 8.01 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -74267 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr5-1782 chr5 39074673 39074883 + 8.01 0.000 promoter-TSS (NM_152756) promoter-TSS (NM_152756) -379 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr10-3818 chr10 132911737 132911947 + 8.01 0.000 intron (NM_001200049, intron 19 of 57) intron (NM_001200049, intron 19 of 57) 30728 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr19-4094 chr19 15277152 15277362 + 8.01 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) 3194 NM_014299 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr1-10538 chr1 170748052 170748262 + 8.01 0.000 Intergenic (CTTC)n|Simple_repeat|Simple_repeat 84026 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr7-8257 chr7 36348364 36348574 + 8.01 0.000 intron (NM_001300956, intron 1 of 5) MER102b|DNA|hAT-Charlie 18771 NM_001199707 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr7-8695 chr7 74190598 74190808 + 8.01 0.000 promoter-TSS (NR_030321) promoter-TSS (NR_030321) -495 NR_030321 693175 NR_030321 ENSG00000207741 MIR590 MIRN590|hsa-mir-590|mir-590 microRNA 590 ncRNA chr7-5252 chr7 18323462 18323672 + 8.01 0.000 intron (NM_001321896, intron 1 of 12) MER5B|DNA|hAT-Charlie 33475 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr12-3621 chr12 77563110 77563320 + 8.01 0.000 Intergenic L1ME3|LINE|L1 -267679 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr2-3779 chr2 10546988 10547198 + 8.01 0.000 Intergenic Intergenic 97365 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr10-7110 chr10 97372761 97372971 + 8.01 0.000 intron (NM_001145114, intron 16 of 31) intron (NM_001145114, intron 16 of 31) 28474 NM_015179 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chrX-5160 chrX 132151350 132151560 + 8.01 0.000 Intergenic L1ME2|LINE|L1 -23433 NM_194277 90167 Hs.170776 NM_194277 ENSG00000165694 FRMD7 NYS|NYS1|XIPAN FERM domain containing 7 protein-coding chr1-11313 chr1 20748430 20748640 + 8.01 0.000 intron (NM_016287, intron 10 of 12) AluY|SINE|Alu -15832 NM_001103160 400745 Hs.591522 NM_001103160 ENSG00000189410 SH2D5 - SH2 domain containing 5 protein-coding chr4-4491 chr4 57641792 57642002 + 8.01 0.000 Intergenic Intergenic 216025 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr9-5485 chr9 100634230 100634440 + 8.01 0.000 Intergenic AluSx|SINE|Alu 56256 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr11-9503 chr11 63001358 63001568 + 8.01 0.000 intron (NM_001184736, intron 1 of 9) L2|LINE|L2 14378 NM_004254 9376 Hs.266223 NM_004254 ENSG00000149452 SLC22A8 OAT3 solute carrier family 22 member 8 protein-coding chrX-1534 chrX 35284465 35284675 + 8.01 0.000 Intergenic L1MA8|LINE|L1 341774 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr10-7559 chr10 15821345 15821555 + 8.01 0.000 intron (NM_024948, intron 9 of 14) intron (NM_024948, intron 9 of 14) 39057 NM_024948 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chrX-4364 chrX 49122910 49123120 + 8.01 0.000 intron (NM_015698, intron 1 of 10) intron (NM_015698, intron 1 of 10) 720 NM_015698 27238 Hs.503666 NM_015698 ENSG00000068394 GPKOW GPATC5|GPATCH5|Spp2|T54 G-patch domain and KOW motifs protein-coding chr18-2324 chr18 5411666 5411876 + 8.01 0.000 intron (NM_001281535, intron 14 of 21) intron (NM_001281535, intron 14 of 21) -114718 NM_001243704 7541 Hs.592340 NM_003409 ENSG00000198081 ZBTB14 ZF5|ZFP-161|ZFP-5|ZFP161|ZNF478 zinc finger and BTB domain containing 14 protein-coding chr16-2846 chr16 85067173 85067383 + 8.01 0.000 exon (NM_001297766, exon 2 of 8) exon (NM_001297766, exon 2 of 8) 4066 NM_001286565 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chrX-995 chrX 19150833 19151043 + 8.01 0.000 Intergenic MER106A|DNA|hAT-Charlie -28301 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr6-2863 chr6 3926062 3926272 + 8.01 0.000 Intergenic Intergenic 76794 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr5-4923 chr5 73634484 73634694 + 8.01 0.000 intron (NM_001177693, intron 1 of 35) L3|LINE|CR1 8431 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr9-7359 chr9 16138216 16138426 + 8.01 0.000 Intergenic Intergenic 114786 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr21-776 chr21 44835412 44835622 + 8.01 0.000 Intergenic Intergenic -17388 NM_001286416 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr1-14569 chr1 53311162 53311372 + 8.01 0.000 intron (NM_004631, intron 2 of 18) intron (NM_004631, intron 2 of 18) 16803 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr1-9108 chr1 17100206 17100416 + 8.01 0.000 intron (NM_007365, intron 3 of 15) AluSx1|SINE|Alu 19140 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr1-9012 chr1 11145012 11145222 + 8.01 0.000 intron (NM_004958, intron 32 of 57) intron (NM_004958, intron 32 of 57) 1219 NR_046600 100873935 Hs.679133 NR_046600 ENSG00000225602 MTOR-AS1 - MTOR antisense RNA 1 ncRNA chr5-5297 chr5 126165527 126165737 + 8.01 0.000 Intergenic Intergenic -13945 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr19-4350 chr19 2035163 2035373 + 8.01 0.000 Intergenic Intergenic 15976 NM_017572 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAPK interacting serine/threonine kinase 2 protein-coding chr2-13585 chr2 157005556 157005766 + 8.01 0.000 Intergenic Intergenic -252044 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr6-4285 chr6 13364763 13364973 + 8.01 0.000 exon (NM_001242630, exon 2 of 2) exon (NM_001242630, exon 2 of 2) -36285 NM_001318809 107080638 Hs.484678 NM_001318809 ENSG00000145979 TBC1D7-LOC100130357 - TBC1D7-LOC100130357 readthrough protein-coding chr8-3399 chr8 65568385 65568595 + 8.01 0.000 Intergenic Intergenic -5824 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chrX-4578 chrX 71269788 71269998 + 8.01 0.000 Intergenic SVA_E|Retroposon|SVA -13299 NM_001145410 4841 Hs.533282 NM_007363 ENSG00000147140 NONO MRXS34|NMT55|NRB54|P54|P54NRB|PPP1R114 non-POU domain containing octamer binding protein-coding chr18-1320 chr18 74547029 74547239 + 8.01 0.000 intron (NM_032649, intron 1 of 11) intron (NM_032649, intron 1 of 11) 12634 NM_032649 84735 Hs.400613 NM_032649 ENSG00000150656 CNDP1 CN1|CPGL2|HsT2308 carnosine dipeptidase 1 protein-coding chr4-4406 chr4 43827384 43827594 + 8.01 0.000 Intergenic L1MC1|LINE|L1 -189372 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr1-16555 chr1 233859763 233859973 + 8.01 0.000 Intergenic Intergenic -44808 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr19-5095 chr19 55363593 55363803 + 8.01 0.000 promoter-TSS (NM_001145402) promoter-TSS (NM_001145402) -438 NM_001145402 284418 Hs.528319 NM_001145402 ENSG00000180043 FAM71E2 C19orf16 family with sequence similarity 71 member E2 protein-coding chr3-6025 chr3 49476615 49476825 + 8.01 0.000 intron (NM_001177634, intron 2 of 5) intron (NM_001177634, intron 2 of 5) 6588 NM_001177640 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr22-1905 chr22 45789621 45789831 + 8.01 0.000 intron (NM_013236, intron 9 of 11) intron (NM_013236, intron 9 of 11) 29202 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr3-9887 chr3 82452756 82452966 + 8.01 0.000 intron (NR_147146, intron 4 of 8) MSTA-int|LTR|ERVL-MaLR 466719 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr11-9723 chr11 68367478 68367688 + 8.01 0.000 intron (NM_002335, intron 5 of 22) intron (NM_002335, intron 5 of 22) 54992 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr13-1876 chr13 29369038 29369248 + 8.01 0.000 intron (NM_001033602, intron 6 of 13) intron (NM_001033602, intron 6 of 13) -59517 NM_015233 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr1-10273 chr1 145936299 145936509 + 8.01 0.000 exon (NM_153713, exon 6 of 6) exon (NM_153713, exon 6 of 6) -8868 NM_005105 9939 Hs.591455 NM_005105 ENSG00000265241 RBM8A BOV-1A|BOV-1B|BOV-1C|C1DELq21.1|DEL1q21.1|MDS014|RBM8|RBM8B|TAR|Y14|ZNRP|ZRNP1 RNA binding motif protein 8A protein-coding chr19-3376 chr19 12697836 12698046 + 8.01 0.000 Intergenic AluSq2|SINE|Alu -1310 NM_032301 84261 Hs.515154 NM_032301 ENSG00000132004 FBXW9 Fbw9|MEC-15 F-box and WD repeat domain containing 9 protein-coding chr3-7805 chr3 96203717 96203927 + 8.01 0.000 Intergenic L1PA15|LINE|L1 -156142 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chr2-7203 chr2 216706392 216706602 + 8.01 0.000 Intergenic Intergenic -10948 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr10-4586 chr10 110542215 110542425 + 8.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR -25371 NM_005445 9126 Hs.24485 NM_005445 ENSG00000108055 SMC3 BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1 structural maintenance of chromosomes 3 protein-coding chr3-10961 chr3 176967481 176967691 + 8.01 0.000 Intergenic LTR32|LTR|ERVL -150585 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr12-5520 chr12 131858759 131858969 + 8.01 0.000 Intergenic Intergenic 30471 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr1-15091 chr1 98803239 98803449 + 8.01 0.000 Intergenic HERVH-int|LTR|ERV1 141623 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr5-7334 chr5 16735945 16736155 + 8.01 0.000 intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -118992 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr1-5839 chr1 232393000 232393210 + 8.01 0.000 Intergenic Intergenic 122503 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr10-4953 chr10 28021005 28021215 + 8.01 0.000 Intergenic LTR33A_|LTR|ERVL -22031 NM_018076 55130 Hs.127530 NM_018076 ENSG00000169126 ARMC4 CILD23 armadillo repeat containing 4 protein-coding chr22-2387 chr22 49790842 49791052 + 8.01 0.000 intron (NM_001349942, intron 7 of 12) intron (NM_001349942, intron 7 of 12) 33384 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr2-12419 chr2 56615746 56615956 + 8.01 0.000 Intergenic Intergenic -430081 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr11-4373 chr11 75181586 75181796 + 8.01 0.000 intron (NM_007256, intron 7 of 13) intron (NM_007256, intron 7 of 13) 21859 NM_001145211 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr17-4446 chr17 49548603 49548813 + 8.01 0.000 intron (NR_103773, intron 1 of 2) intron (NR_103773, intron 1 of 2) 25356 NR_103773 100288866 Hs.720309 NR_103773 ENSG00000249906 LOC100288866 - uncharacterized LOC100288866 ncRNA chr4-8493 chr4 159911425 159911635 + 8.01 0.000 Intergenic MIRb|SINE|MIR -133746 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr3-4023 chr3 65756659 65756869 + 8.01 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -137052 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr10-2333 chr10 67263005 67263215 + 8.01 0.000 intron (NM_001127384, intron 5 of 17) intron (NM_001127384, intron 5 of 17) 140300 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr17-5312 chr17 27768012 27768222 + 8.01 0.000 intron (NM_000625, intron 17 of 26) AluJo|SINE|Alu 32412 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr16-6860 chr16 83390628 83390838 + 8.01 0.000 intron (NM_001220489, intron 5 of 12) intron (NM_001220489, intron 5 of 12) -117613 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr15-2086 chr15 63685522 63685732 + 8.01 0.000 intron (NM_003922, intron 34 of 77) MER68-int|LTR|ERVL -84800 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr15-2942 chr15 48241457 48241667 + 8.01 0.000 exon (NM_000338, exon 10 of 27) exon (NM_000338, exon 10 of 27) 35260 NM_001184832 6557 Hs.123116 NM_000338 ENSG00000074803 SLC12A1 BSC1|NKCC2 solute carrier family 12 member 1 protein-coding chr7-8975 chr7 99726158 99726368 + 8.01 0.000 intron (NM_000765, intron 2 of 12) HERVH-int|LTR|ERV1 8933 NM_000765 1551 Hs.111944 NM_000765 ENSG00000160870 CYP3A7 CP37|CYPIIIA7|P-450(HFL33)|P-450111A7|P450-HFLA cytochrome P450 family 3 subfamily A member 7 protein-coding chr8-5763 chr8 141642540 141642750 + 8.01 0.000 Intergenic Intergenic -135415 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr1-13817 chr1 19358870 19359080 + 8.01 0.000 intron (NM_001206540, intron 4 of 9) intron (NM_001206540, intron 4 of 9) 46649 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr16-4425 chr16 52433357 52433567 + 8.01 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 113681 NM_001080430 27324 Hs.132574 NM_001080430 ENSG00000103460 TOX3 CAGF9|TNRC9 TOX high mobility group box family member 3 protein-coding chr17-4356 chr17 8376014 8376224 + 8.01 0.000 5' UTR (NM_001304947, exon 1 of 2) 5' UTR (NM_001304947, exon 1 of 2) 585 NM_001304947 124751 Hs.304604 NM_213597 ENSG00000184619 KRBA2 - KRAB-A domain containing 2 protein-coding chr15-4253 chr15 33769102 33769312 + 8.01 0.000 intron (NM_001243996, intron 62 of 102) intron (NM_001243996, intron 62 of 102) -199290 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr6-4748 chr6 69571212 69571422 + 8.01 0.000 Intergenic MLT2A2|LTR|ERVL 225149 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr4-7123 chr4 36168489 36168699 + 8.01 0.000 intron (NR_146894, intron 9 of 32) intron (NR_146894, intron 9 of 32) 75345 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr19-4620 chr19 13498401 13498611 + 8.01 0.000 intron (NM_023035, intron 1 of 46) intron (NM_023035, intron 1 of 46) 7954 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr2-6640 chr2 1560972 1561182 + 8.01 0.000 Intergenic LTR5B|LTR|ERVK 146669 NM_175722 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chr1-5461 chr1 63797310 63797520 + 8.01 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 23398 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr10-2865 chr10 77953640 77953850 + 8.01 0.000 Intergenic Intergenic 26933 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr18-1104 chr18 64184539 64184749 + 8.01 0.000 intron (NR_033881, intron 2 of 9) MLT1A|LTR|ERVL-MaLR -35618 NR_027245 221241 Hs.567778 NM_152728 ENSG00000179676 LINC00305 C18orf20|HsT1235|NCRNA00305 long intergenic non-protein coding RNA 305 ncRNA chr13-2117 chr13 90303260 90303470 + 8.01 0.000 Intergenic L1PA8|LINE|L1 72183 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr12-4378 chr12 5033678 5033888 + 8.01 0.000 Intergenic Intergenic -10096 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chrX-1172 chrX 49766533 49766743 + 8.01 0.000 Intergenic Intergenic -62622 NM_001318877 9506 Hs.441038 NM_007003 ENSG00000101951 PAGE4 CT16.7|GAGE-9|GAGEC1|JM-27|JM27|PAGE-1|PAGE-4 PAGE family member 4 protein-coding chr8-6450 chr8 61321433 61321643 + 8.01 0.000 intron (NM_173519, intron 2 of 5) intron (NM_173519, intron 2 of 5) 33568 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr6-5310 chr6 143135027 143135237 + 8.01 0.000 intron (NM_001366358, intron 1 of 5) L1M5|LINE|L1 8993 NM_001366358 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr6-4370 chr6 20920043 20920253 + 8.01 0.000 intron (NM_017774, intron 9 of 15) MLT1N2|LTR|ERVL-MaLR 385691 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr16-6036 chr16 10028369 10028579 + 8.01 0.000 intron (NM_001134408, intron 2 of 13) MLT1J2|LTR|ERVL-MaLR 153593 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr15-3484 chr15 96190857 96191067 + 8.01 0.000 intron (NR_125738, intron 3 of 4) FLAM_C|SINE|Alu -63121 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr11-8536 chr11 128741439 128741649 + 8.01 0.000 intron (NM_002017, intron 1 of 8) intron (NM_002017, intron 1 of 8) -45521 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr3-3715 chr3 179015669 179015879 + 8.01 0.000 Intergenic Intergenic 56035 NM_152240 64393 Hs.371609 NM_022470 ENSG00000172667 ZMAT3 PAG608|WIG-1|WIG1 zinc finger matrin-type 3 protein-coding chr10-8213 chr10 72885017 72885227 + 8.01 0.000 intron (NM_138357, intron 7 of 7) intron (NM_138357, intron 7 of 7) -8617 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr11-5484 chr11 78119487 78119697 + 8.01 0.000 intron (NM_001007027, intron 4 of 13) AluSx3|SINE|Alu 20034 NM_024079 79053 Hs.503368 NM_024079 ENSG00000159063 ALG8 CDG1H|PCLD3 ALG8 alpha-1,3-glucosyltransferase protein-coding chr1-15557 chr1 158805296 158805506 + 8.01 0.000 Intergenic Charlie17a|DNA|hAT-Charlie -25950 NM_002432 4332 Hs.153837 NM_002432 ENSG00000163563 MNDA PYHIN3 myeloid cell nuclear differentiation antigen protein-coding chr1-5808 chr1 203537574 203537784 + 8.01 0.000 Intergenic Intergenic 43526 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr19-4982 chr19 46199335 46199545 + 8.01 0.000 intron (NR_135234, intron 1 of 2) intron (NR_135234, intron 1 of 2) 3622 NR_135234 645553 Hs.613068 NR_135234 IGFL2-AS1 - IGFL2 antisense RNA 1 ncRNA chr4-6862 chr4 10053329 10053539 + 8.01 0.000 Intergenic AluJr|SINE|Alu -13186 NM_001001290 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr16-2531 chr16 3091859 3092069 + 8.01 0.000 intron (NM_001365273, intron 1 of 3) intron (NM_001365273, intron 1 of 3) 7330 NM_001365272 84891 Hs.334515 NM_032805 ENSG00000130182 ZSCAN10 ZFP206|ZNF206 zinc finger and SCAN domain containing 10 protein-coding chr20-2912 chr20 63756795 63757005 + 8.01 0.000 intron (NM_001369741, intron 3 of 4) L1ME3|LINE|L1 17124 NM_020062 56731 Hs.435126 NM_020062 ENSG00000125520 SLC2A4RG GEF|HDBP-1|HDBP1|Si-1-2|Si-1-2-19 SLC2A4 regulator protein-coding chr7-4227 chr7 795120 795330 + 8.01 0.000 Intergenic Intergenic -20332 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr11-8633 chr11 2524726 2524936 + 8.01 0.000 intron (NM_181798, intron 1 of 15) intron (NM_181798, intron 1 of 15) 63377 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr6-6803 chr6 5499367 5499577 + 8.01 0.000 intron (NM_006567, intron 4 of 6) MIR3|SINE|MIR -41397 NR_125847 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA chr11-9391 chr11 57021566 57021776 + 8.01 0.000 Intergenic L1PA16|LINE|L1 -15863 NR_036445 219525 Hs.554519 NR_036445 ENSG00000283307 OR5AK4P PJCG3 olfactory receptor family 5 subfamily AK member 4 pseudogene pseudo chr10-3379 chr10 24465422 24465632 + 8.01 0.000 intron (NM_001321681, intron 1 of 13) intron (NM_001321681, intron 1 of 13) -1004 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr11-6773 chr11 86790487 86790697 + 8.01 0.000 promoter-TSS (NM_001293180) promoter-TSS (NM_001293180) -479 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr3-10666 chr3 150083326 150083536 + 8.01 0.000 Intergenic Intergenic -13012 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr2-12065 chr2 31632395 31632605 + 8.01 0.000 Intergenic HERV17-int|LTR|ERV1 -51562 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr1-12731 chr1 58592701 58592911 + 8.01 0.000 Intergenic Intergenic -15554 NM_002353 4070 Hs.23582 NM_002353 ENSG00000184292 TACSTD2 EGP-1|EGP1|GA733-1|GA7331|GP50|M1S1|TROP2 tumor associated calcium signal transducer 2 protein-coding chr11-9445 chr11 61169999 61170209 + 8.01 0.000 Intergenic LTR16A2|LTR|ERVL -8678 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr2-8693 chr2 151947361 151947571 + 8.01 0.000 intron (NM_000726, intron 2 of 13) MER5A|DNA|hAT-Charlie 24586 NM_001330118 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr22-3908 chr22 36222667 36222877 + 8.01 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 16755 NM_030882 23780 Hs.474740 NM_030882 ENSG00000128335 APOL2 APOL-II|APOL3 apolipoprotein L2 protein-coding chr7-1157 chr7 127347779 127347989 + 8.01 0.000 Intergenic CpG 44824 NM_176814 168850 Hs.159006 NM_176814 ENSG00000048405 ZNF800 - zinc finger protein 800 protein-coding chr4-5948 chr4 156949595 156949805 + 8.01 0.000 intron (NR_036641, intron 1 of 6) intron (NR_036641, intron 1 of 6) 22099 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr10-6788 chr10 4576002 4576212 + 8.01 0.000 Intergenic L1ME1|LINE|L1 -80049 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA chr7-9505 chr7 138079241 138079451 + 8.01 0.000 intron (NM_001190907, intron 1 of 7) intron (NM_001190907, intron 1 of 7) 2887 NM_001190907 6718 Hs.201667 NM_005989 ENSG00000122787 AKR1D1 3o5bred|CBAS2|SRD5B1 aldo-keto reductase family 1 member D1 protein-coding chr10-8969 chr10 119148092 119148302 + 8.01 0.000 intron (NM_213649, intron 11 of 13) intron (NM_213649, intron 11 of 13) 17495 NR_110305 119559 Hs.655168 NM_178867 ENSG00000183605 SFXN4 BCRM1|COXPD18|SLC56A4 sideroflexin 4 protein-coding chr2-11491 chr2 234670158 234670368 + 8.01 0.000 Intergenic Intergenic -12405 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr18-3049 chr18 28450350 28450560 + 8.01 0.000 Intergenic MIR|SINE|MIR -273325 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr15-4279 chr15 37014945 37015155 + 8.01 0.000 intron (NM_172316, intron 8 of 12) intron (NM_172316, intron 8 of 12) -42149 NR_107030 102466875 NR_107030 ENSG00000277202 MIR8063 hsa-mir-8063 microRNA 8063 ncRNA chrX-5464 chrX 155053748 155053958 + 8.01 0.000 intron (NM_023934, intron 4 of 4) L2|LINE|L2 17283 NM_001018024 100272147 Hs.6917 NM_001018024 ENSG00000182712 CMC4 C6.1B|MTCP1|MTCP1B|MTCP1NB|p8|p8MTCP1 C-X9-C motif containing 4 protein-coding chr1-4958 chr1 53393500 53393710 + 8.01 0.000 Intergenic Intergenic 46415 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr17-5086 chr17 4446362 4446572 + 8.01 0.000 intron (NM_001320449, intron 3 of 10) intron (NM_001320449, intron 3 of 10) 12527 NM_182538 201305 Hs.657543 NM_182538 ENSG00000182557 SPNS3 SLC62A3 sphingolipid transporter 3 (putative) protein-coding chr13-3448 chr13 109382029 109382239 + 8.01 0.000 Intergenic Intergenic -18562 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr2-6525 chr2 201309896 201310106 + 8.01 0.000 intron (NM_139163, intron 9 of 14) intron (NM_139163, intron 9 of 14) 47344 NM_001289993 130540 Hs.107944 NM_139163 ENSG00000155749 FLACC1 ALS2CR12 flagellum associated containing coiled-coil domains 1 protein-coding chr18-3393 chr18 60883346 60883556 + 8.01 0.000 Intergenic (GTTTTT)n|Simple_repeat|Simple_repeat -449979 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr2-7412 chr2 9301447 9301657 + 8.01 0.000 intron (NM_003887, intron 3 of 27) intron (NM_003887, intron 3 of 27) 94740 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr17-3100 chr17 3474408 3474618 + 8.01 0.000 intron (NM_001128085, intron 1 of 6) intron (NM_001128085, intron 1 of 6) 403 NM_001128085 443 Hs.171142 NM_000049 ENSG00000108381 ASPA ACY2|ASP aspartoacylase protein-coding chr18-2514 chr18 66770161 66770371 + 8.01 0.000 Intergenic Intergenic -166176 NR_073130 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr18-2200 chr18 61948692 61948902 + 8.01 0.000 Intergenic Intergenic -55790 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr17-5347 chr17 29257991 29258201 + 8.01 0.000 3' UTR (NM_020772, exon 4 of 4) 3' UTR (NM_020772, exon 4 of 4) 11239 NM_005208 1411 Hs.46275 NM_005208 ENSG00000108255 CRYBA1 CRYB1|CTRCT10 crystallin beta A1 protein-coding chrX-4349 chrX 48112990 48113200 + 8.01 0.000 intron (NR_028366, intron 4 of 7) intron (NR_028366, intron 4 of 7) 5113 NR_028366 280657 Hs.511998 NM_173357 SSX6P SSX6|SSXP2|dJ54B20.1|psiSSX2 SSX family member 6, pseudogene pseudo chr6-4219 chr6 4513016 4513226 + 8.01 0.000 Intergenic L2a|LINE|L2 24323 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr16-5935 chr16 3598902 3599112 + 8.01 0.000 intron (NM_032444, intron 5 of 14) intron (NM_032444, intron 5 of 14) 12599 NM_032444 84464 Hs.143681 NM_032444 ENSG00000188827 SLX4 BTBD12|FANCP|MUS312 SLX4 structure-specific endonuclease subunit protein-coding chr3-1286 chr3 69080010 69080220 + 8.01 0.000 exon (NM_003968, exon 2 of 18) exon (NM_003968, exon 2 of 18) 250 NM_198195 9039 Hs.154320 NM_003968 ENSG00000144744 UBA3 NAE2|UBE1C|hUBA3 ubiquitin like modifier activating enzyme 3 protein-coding chr10-2528 chr10 49407705 49407915 + 8.01 0.000 Intergenic Intergenic -11721 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding chr15-4034 chr15 62252787 62252997 + 8.01 0.000 Intergenic Intergenic -4097 NR_136885 255180 Hs.370479 NM_173805 GOLGA2P11 - GOLGA2 pseudogene 11 pseudo chr18-1589 chr18 38357770 38357980 + 8.01 0.000 Intergenic Intergenic 700740 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr15-3312 chr15 79122882 79123092 + 8.01 0.000 Intergenic Intergenic -32207 NM_001145648 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr5-2693 chr5 73513251 73513461 + 8.01 0.000 Intergenic L2c|LINE|L2 14931 NM_001037637 689 Hs.591768 NM_001207 ENSG00000145741 BTF3 BETA-NAC|BTF3a|BTF3b|NACB basic transcription factor 3 protein-coding chr19-4775 chr19 32799169 32799379 + 8.01 0.000 intron (NM_001366102, intron 16 of 32) MIRc|SINE|MIR 70493 NM_001126335 11136 Hs.743345 NM_014270 ENSG00000021488 SLC7A9 BAT1|CSNU3 solute carrier family 7 member 9 protein-coding chr6-7498 chr6 63398845 63399055 + 8.01 0.000 Intergenic AluJo|SINE|Alu -78967 NM_016571 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr20-4432 chr20 61254721 61254931 + 8.01 0.000 exon (NM_001794, exon 2 of 16) exon (NM_001794, exon 2 of 16) 2565 NM_001794 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr19-4870 chr19 39515021 39515231 + 8.01 0.000 promoter-TSS (NM_182704) promoter-TSS (NM_182704) 13 NM_001350809 348303 Hs.319284 NM_182704 ENSG00000186838 SELENOV SELV selenoprotein V protein-coding chr22-3463 chr22 42736626 42736836 + 8.01 0.000 Intergenic LTR38B|LTR|ERV1 -15430 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr3-7437 chr3 123301551 123301761 + 8.01 0.000 intron (NM_183357, intron 14 of 20) intron (NM_183357, intron 14 of 20) 99713 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr8-3439 chr8 81957362 81957572 + 8.01 0.000 Intergenic L2a|LINE|L2 -115181 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr2-12823 chr2 94890667 94890877 + 8.01 0.000 intron (NR_037597, intron 6 of 9) intron (NR_037597, intron 6 of 9) 19342 NM_001286559 150483 Hs.631517 NM_144705 ENSG00000163060 TEKT4 - tektin 4 protein-coding chr19-7092 chr19 56111940 56112150 + 8.01 0.000 intron (NM_001002836, intron 1 of 2) intron (NM_001002836, intron 1 of 2) 9250 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr16-6865 chr16 83992345 83992555 + 8.01 0.000 intron (NM_019065, intron 6 of 12) intron (NM_019065, intron 6 of 12) 23802 NM_001329749 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr2-5077 chr2 10408499 10408709 + 8.01 0.000 5' UTR (NM_134421, exon 3 of 6) 5' UTR (NM_134421, exon 3 of 6) 38245 NR_028374 100302743 Hs.730525 NR_028374 ENSG00000206633 SNORA80B ACA67B small nucleolar RNA, H/ACA box 80B snoRNA chr1-13169 chr1 203788799 203789009 + 8.01 0.000 Intergenic AluSx1|SINE|Alu -6633 NM_014827 9877 Hs.532399 NM_014827 ENSG00000058673 ZC3H11A ZC3HDC11A zinc finger CCCH-type containing 11A protein-coding chr2-3291 chr2 74391394 74391604 + 8.01 0.000 non-coding (NR_158172, exon 3 of 4) non-coding (NR_158172, exon 3 of 4) 588 NM_001190836 1639 Hs.516111 NM_004082 ENSG00000204843 DCTN1 DAP-150|DP-150|P135 dynactin subunit 1 protein-coding chr12-4246 chr12 112592116 112592326 + 8.01 0.000 intron (NM_001347952, intron 1 of 21) AluSz6|SINE|Alu 16985 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr8-6628 chr8 77340447 77340657 + 8.01 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -110145 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr3-6759 chr3 141243862 141244072 + 8.01 0.000 intron (NM_152282, intron 3 of 7) L1ME4a|LINE|L1 12142 NM_001037172 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chrX-4796 chrX 99610227 99610437 + 8.01 0.000 Intergenic MER49|LTR|ERV1 799941 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr7-5778 chr7 76928629 76928839 + 8.01 0.000 Intergenic Intergenic -52088 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr1-5266 chr1 205075487 205075697 + 8.01 0.000 non-coding (NR_144350, exon 23 of 23) non-coding (NR_144350, exon 23 of 23) 8868 NM_203376 388730 Hs.146928 NM_203376 ENSG00000174529 TMEM81 HC3107|KVLA2788|UNQ2788 transmembrane protein 81 protein-coding chr2-4614 chr2 145277808 145278018 + 8.01 0.000 Intergenic Intergenic 609946 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr17-2810 chr17 10298772 10298982 + 8.01 0.000 Intergenic Intergenic 74129 NM_003802 8735 Hs.711142 NM_003802 ENSG00000006788 MYH13 MyHC-IIL|MyHC-eo myosin heavy chain 13 protein-coding chr21-1392 chr21 44026009 44026219 + 8.01 0.000 intron (NM_003274, intron 1 of 22) intron (NM_003274, intron 1 of 22) 13805 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr22-2539 chr22 25742610 25742820 + 8.01 0.000 intron (NM_001318245, intron 1 of 43) intron (NM_001318245, intron 1 of 43) 527 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr5-5835 chr5 178977871 178978081 + 8.01 0.000 TTS (NM_000843) TTS (NM_000843) 17344 NM_000843 2916 Hs.248131 NM_000843 ENSG00000113262 GRM6 CSNB1B|GPRC1F|MGLUR6|mGlu6 glutamate metabotropic receptor 6 protein-coding chr10-4713 chr10 464609 464819 + 8.01 0.000 intron (NM_014974, intron 3 of 36) L1PA7|LINE|L1 -163850 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr22-2949 chr22 48565218 48565428 + 8.01 0.000 intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) -11017 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr16-5733 chr16 85017353 85017563 + 8.01 0.000 Intergenic L1ME3A|LINE|L1 -5923 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr15-3831 chr15 77811276 77811486 + 8.01 0.000 intron (NM_001301186, intron 1 of 5) intron (NM_001301186, intron 1 of 5) 8071 NM_001301194 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr4-5645 chr4 8166380 8166590 + 8.01 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat -7672 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr12-4639 chr12 44448563 44448773 + 8.01 0.000 Intergenic Intergenic 426993 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr6-6367 chr6 68658374 68658584 + 8.01 0.000 intron (NM_001704, intron 3 of 31) intron (NM_001704, intron 3 of 31) 23197 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr20-4258 chr20 49372211 49372421 + 8.01 0.000 3' UTR (NM_004975, exon 2 of 2) 3' UTR (NM_004975, exon 2 of 2) 91633 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr3-9149 chr3 32531060 32531270 + 8.01 0.000 intron (NM_016141, intron 8 of 12) L2|LINE|L2 -24776 NR_106753 102465247 NR_106753 ENSG00000276147 MIR548AY hsa-mir-548ay microRNA 548ay ncRNA chrX-3416 chrX 12286809 12287019 + 8.01 0.000 intron (NM_001368396, intron 1 of 16) intron (NM_001368396, intron 1 of 16) 148441 NM_001368401 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr22-2207 chr22 17542708 17542918 + 8.01 0.000 exon (NM_001290047, exon 16 of 19) exon (NM_001290047, exon 16 of 19) -20626 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr15-3671 chr15 33453299 33453509 + 8.01 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 142437 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chrX-2256 chrX 47483154 47483364 + 8.01 0.000 promoter-TSS (NM_007130) promoter-TSS (NM_007130) 10 NM_001324151 7592 Hs.496074 NM_007130 ENSG00000147124 ZNF41 MRX89 zinc finger protein 41 protein-coding chr8-6422 chr8 58485563 58485773 + 8.01 0.000 Intergenic Intergenic 14495 NM_000780 1581 Hs.1644 NM_000780 ENSG00000167910 CYP7A1 CP7A|CYP7|CYPVII cytochrome P450 family 7 subfamily A member 1 protein-coding chr13-2251 chr13 26381102 26381312 + 8.01 0.000 intron (NM_001346501, intron 4 of 11) intron (NM_001346501, intron 4 of 11) 127078 NM_001346501 1024 Hs.382306 NM_001260 ENSG00000132964 CDK8 K35 cyclin dependent kinase 8 protein-coding chrX-5340 chrX 148059227 148059437 + 8.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR 77995 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr1-15821 chr1 179022597 179022807 + 8.01 0.000 Intergenic Intergenic -3102 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr10-5511 chr10 83228868 83229078 + 8.01 0.000 Intergenic MIRb|SINE|MIR 448116 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chrX-1622 chrX 114866986 114867196 + 8.01 0.000 intron (NM_001256760, intron 6 of 6) L1MA1|LINE|L1 43637 NR_029955 554212 NR_029955 ENSG00000199001 MIR448 MIRN448|hsa-mir-448|miRNA448 microRNA 448 ncRNA chr12-4822 chr12 57016225 57016435 + 8.01 0.000 intron (NR_135166, intron 1 of 6) intron (NR_135166, intron 1 of 6) 199 NM_001178054 6866 Hs.9730 NM_013251 ENSG00000166863 TAC3 HH10|NKB|NKNB|PRO1155|ZNEUROK1 tachykinin 3 protein-coding chr5-1611 chr5 57138269 57138479 + 8.01 0.000 Intergenic Intergenic -35574 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr4-7790 chr4 96753357 96753567 + 8.01 0.000 intron (NR_147149, intron 3 of 3) L2a|LINE|L2 442759 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr11-9820 chr11 71568891 71569101 + 8.01 0.000 Intergenic Intergenic 3433 NM_001012710 387273 Hs.661887 NM_001012710 ENSG00000204572 KRTAP5-10 KRTAP5.10 keratin associated protein 5-10 protein-coding chr19-5326 chr19 3441694 3441904 + 8.01 0.000 intron (NM_001245002, intron 6 of 10) intron (NM_001245002, intron 6 of 10) 38726 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr5-8362 chr5 121725982 121726192 + 8.01 0.000 Intergenic L1PA8|LINE|L1 -125795 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr7-5154 chr7 6186587 6186797 + 8.01 0.000 intron (NM_001367581, intron 4 of 13) intron (NM_001367581, intron 4 of 13) -14555 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr2-11655 chr2 6859496 6859706 + 8.01 0.000 intron (NR_046236, intron 3 of 4) THE1B-int|LTR|ERVL-MaLR 6218 NM_001256477 129607 Hs.7155 NM_207315 ENSG00000134326 CMPK2 NDK|TMPK2|TYKi|UMP-CMPK2 cytidine/uridine monophosphate kinase 2 protein-coding chrX-1081 chrX 139642560 139642770 + 8.01 0.000 5' UTR (NM_005369, exon 1 of 25) 5' UTR (NM_005369, exon 1 of 25) 176 NM_001171879 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr17-6059 chr17 79532634 79532844 + 8.01 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) -16591 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr7-4886 chr7 117480818 117481028 + 8.01 0.000 intron (NM_000492, intron 1 of 26) intron (NM_000492, intron 1 of 26) 960 NM_000492 1080 Hs.489786 NM_000492 ENSG00000001626 CFTR ABC35|ABCC7|CF|CFTR/MRP|MRP7|TNR-CFTR|dJ760C5.1 CF transmembrane conductance regulator protein-coding chr6-2450 chr6 11043557 11043767 + 8.01 0.000 promoter-TSS (NR_038963) promoter-TSS (NR_038963) -96 NR_038963 100506409 Hs.43818 NR_038962 ELOVL2-AS1 - ELOVL2 antisense RNA 1 ncRNA chr8-3546 chr8 123687413 123687623 + 8.01 0.000 intron (NM_001003954, intron 10 of 11) intron (NM_001003954, intron 10 of 11) -33717 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr11-10120 chr11 87832909 87833119 + 8.01 0.000 Intergenic L2|LINE|L2 -113603 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chrX-3770 chrX 131176880 131177090 + 8.01 0.000 Intergenic L2a|LINE|L2 94550 NM_001330651 158763 Hs.22905 NM_144967 ENSG00000147256 ARHGAP36 - Rho GTPase activating protein 36 protein-coding chr10-6114 chr10 132700614 132700824 + 8.01 0.000 intron (NM_005539, intron 6 of 15) intron (NM_005539, intron 6 of 15) 19444 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr10-2588 chr10 73200938 73201148 + 8.01 0.000 intron (NM_173348, intron 5 of 13) intron (NM_173348, intron 5 of 13) 32924 NM_173348 317662 Hs.408577 NM_173348 ENSG00000138286 FAM149B1 KIAA0974 family with sequence similarity 149 member B1 protein-coding chr8-5553 chr8 73124887 73125097 + 8.01 0.000 Intergenic Intergenic -31820 NM_153225 157869 Hs.439040 NM_153225 ENSG00000164764 SBSPON C8orf84|RPESP somatomedin B and thrombospondin type 1 domain containing protein-coding chr7-9268 chr7 124316633 124316843 + 8.01 0.000 Intergenic L1M5|LINE|L1 35358 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr19-5356 chr19 5565666 5565876 + 8.01 0.000 intron (NR_027064, intron 1 of 2) intron (NR_027064, intron 1 of 2) 2263 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr9-7405 chr9 20603725 20603935 + 8.01 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) 18108 NM_001286691 4300 Hs.317248 NM_004529 ENSG00000171843 MLLT3 AF9|YEATS3 MLLT3 super elongation complex subunit protein-coding chr16-6702 chr16 70865703 70865913 + 8.01 0.000 intron (NM_001270974, intron 67 of 85) LTR87|LTR|ERVL? -64650 NM_018052 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|TAX1BP2|TRX VAC14 component of PIKFYVE complex protein-coding chr2-9641 chr2 18720534 18720744 + 8.01 0.000 Intergenic Intergenic -131059 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr16-4628 chr16 72050796 72051006 + 8.01 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -3604 NM_001318138 3240 Hs.513711 NM_005143 ENSG00000257017 HP BP|HP2ALPHA2|HPA1S haptoglobin protein-coding chr13-1340 chr13 40212976 40213186 + 8.01 0.000 intron (NR_033877, intron 1 of 5) MLT1J1|LTR|ERVL-MaLR 7421 NR_033877 400123 Hs.577960 NR_033877 ENSG00000215483 LINC00548 - long intergenic non-protein coding RNA 548 ncRNA chr1-5648 chr1 26346014 26346224 + 8.01 0.000 exon (NM_001039775, exon 2 of 20) exon (NM_001039775, exon 2 of 20) 8011 NM_001039775 55057 Hs.128738 NM_017977 ENSG00000176092 CRYBG2 AIM1L crystallin beta-gamma domain containing 2 protein-coding chr1-12591 chr1 33319362 33319572 + 8.01 0.000 intron (NM_001080438, intron 1 of 4) intron (NM_001080438, intron 1 of 4) 1631 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding chr15-2130 chr15 73004664 73004874 + 8.01 0.000 Intergenic Intergenic -47694 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr18-1598 chr18 40871672 40871882 + 8.01 0.000 Intergenic Intergenic 648900 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr3-6831 chr3 148134687 148134897 + 8.01 0.000 Intergenic HERVL-int|LTR|ERVL 56633 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr16-5991 chr16 6001068 6001278 + 8.01 0.000 Intergenic Intergenic -17851 NM_001142333 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr12-5945 chr12 77925517 77925727 + 8.01 0.000 intron (NM_001024383, intron 1 of 39) intron (NM_001024383, intron 1 of 39) 94728 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr2-9432 chr2 232887363 232887573 + 8.01 0.000 intron (NM_001114090, intron 7 of 12) intron (NM_001114090, intron 7 of 12) 11636 NR_144372 389084 Hs.657509 NM_206895 ENSG00000182600 SNORC ASCL830|C2orf82|UNQ830 secondary ossification center associated regulator of chondrocyte maturation protein-coding chr2-13774 chr2 171738531 171738741 + 8.01 0.000 intron (NM_001271787, intron 13 of 15) intron (NM_001271787, intron 13 of 15) 50881 NM_001271785 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr2-8047 chr2 71964352 71964562 + 8.01 0.000 Intergenic LTR33C|LTR|ERVL 183405 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr2-14262 chr2 214425669 214425879 + 8.01 0.000 intron (NM_001345929, intron 2 of 2) intron (NM_001345929, intron 2 of 2) 14720 NM_001345929 402117 Hs.534834 NM_001080500 ENSG00000174453 VWC2L - von Willebrand factor C domain containing 2 like protein-coding chr1-10787 chr1 201659959 201660169 + 8.01 0.000 intron (NM_020443, intron 1 of 29) intron (NM_020443, intron 1 of 29) 11742 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr16-3040 chr16 51128949 51129159 + 8.01 0.000 intron (NR_039672, intron 2 of 6) intron (NR_039672, intron 2 of 6) 21543 NM_001127892 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr12-7916 chr12 108434142 108434352 + 8.01 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 39442 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr10-3927 chr10 84347503 84347713 + 8.01 0.000 intron (NM_018999, intron 1 of 10) SVA_C|Retroposon|SVA 19019 NM_001284240 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr21-1129 chr21 37712210 37712420 + 8.01 0.000 intron (NM_002240, intron 3 of 3) intron (NM_002240, intron 3 of 3) 204142 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr7-6432 chr7 158636199 158636409 + 8.01 0.000 intron (NM_001281932, intron 28 of 28) intron (NM_001281932, intron 28 of 28) 44688 NR_049893 100847032 NR_049893 ENSG00000265598 MIR5707 - microRNA 5707 ncRNA chr12-3202 chr12 54021104 54021314 + 8.01 0.000 intron (NM_014620, intron 1 of 3) intron (NM_014620, intron 1 of 3) 4321 NM_014620 3221 Hs.549040 NM_014620 ENSG00000198353 HOXC4 HOX3|HOX3E|cp19 homeobox C4 protein-coding chr7-3820 chr7 97963942 97964152 + 8.01 0.000 TTS (NR_049875) TTS (NR_049875) 384 NR_049876 100847038 NR_049876 ENSG00000264512 MIR5692A2 - microRNA 5692a-2 ncRNA chr3-8655 chr3 177584712 177584922 + 8.01 0.000 intron (NR_047568, intron 2 of 3) MLT1B|LTR|ERVL-MaLR 142896 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chrX-5178 chrX 133254848 133255058 + 8.01 0.000 Intergenic Intergenic -36599 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr6-4409 chr6 26971840 26972050 + 8.01 0.000 intron (NR_026775, intron 2 of 2) intron (NR_026775, intron 2 of 2) 14952 NR_026775 100133205 Hs.526951 NR_026775 ENSG00000224843 LINC00240 C6orf41|NCRNA00240|bA373D17.1 long intergenic non-protein coding RNA 240 ncRNA chr7-3981 chr7 135772275 135772485 + 8.01 0.000 Intergenic MER45A|DNA|hAT-Tip100 -23567 NM_001369697 389558 Hs.55200 NM_205855 ENSG00000189320 FAM180A UNQ1940 family with sequence similarity 180 member A protein-coding chr10-8013 chr10 62039040 62039250 + 8.01 0.000 intron (NM_032199, intron 4 of 9) intron (NM_032199, intron 4 of 9) -10212 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr1-4576 chr1 93076942 93077152 + 8.01 0.000 Intergenic Intergenic -2188 NM_001164393 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr9-7659 chr9 68907797 68908007 + 8.01 0.000 intron (NM_003558, intron 8 of 15) intron (NM_003558, intron 8 of 15) 67939 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chr1-15546 chr1 157921389 157921599 + 8.01 0.000 Intergenic Intergenic -4473 NR_135760 105371458 Hs.591494 NR_135760 ENSG00000236957 LOC105371458 - uncharacterized LOC105371458 ncRNA chr14-4973 chr14 75360043 75360253 + 8.01 0.000 Intergenic AluSz|SINE|Alu 65744 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr15-4443 chr15 45939540 45939750 + 8.01 0.000 Intergenic Intergenic 234450 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr18-2692 chr18 59516395 59516605 + 8.01 0.000 intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) -157235 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr18-2608 chr18 24397248 24397458 + 8.01 0.000 intron (NM_080597, intron 1 of 27) CpG 471 NM_080597 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr5-8259 chr5 111721921 111722131 + 8.01 0.000 intron (NR_040093, intron 2 of 6) intron (NR_040093, intron 2 of 6) 34225 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr17-5839 chr17 66889925 66890135 + 8.01 0.000 3' UTR (NM_145811, exon 6 of 6) 3' UTR (NM_145811, exon 6 of 6) 54913 NM_145811 27091 Hs.278907 NM_014404 ENSG00000075429 CACNG5 - calcium voltage-gated channel auxiliary subunit gamma 5 protein-coding chr1-9559 chr1 41507583 41507793 + 8.01 0.000 3' UTR (NM_001127714, exon 8 of 8) 3' UTR (NM_001127714, exon 8 of 8) -23005 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr1-10438 chr1 159556878 159557088 + 8.01 0.000 Intergenic Intergenic -20976 NM_001004469 127385 Hs.553587 NM_001004469 ENSG00000184155 OR10J5 OR1-28 olfactory receptor family 10 subfamily J member 5 protein-coding chr9-7339 chr9 14766503 14766713 + 8.01 0.000 intron (NR_163242, intron 3 of 11) intron (NR_163242, intron 3 of 11) 12925 NM_001177704 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr4-2387 chr4 47907302 47907512 + 8.01 0.000 intron (NR_103795, intron 3 of 23) intron (NR_103795, intron 3 of 23) -6820 NR_125879 101927157 Hs.134190 NR_125879 LOC101927157 - uncharacterized LOC101927157 ncRNA chr2-3615 chr2 105391081 105391291 + 8.01 0.000 intron (NM_201555, intron 2 of 7) L2c|LINE|L2 7865 NM_001450 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr6-5194 chr6 131372636 131372846 + 8.01 0.000 Intergenic Intergenic 122337 NM_138633 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr10-7402 chr10 3720592 3720802 + 8.01 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 64512 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr12-6229 chr12 28563960 28564170 + 8.01 0.000 Intergenic Intergenic -373327 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr5-5100 chr5 99193232 99193442 + 8.01 0.000 Intergenic SATR1|Satellite|Satellite -263623 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr2-7578 chr2 25187759 25187969 + 8.01 0.000 Intergenic Intergenic -16449 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr10-7469 chr10 9151527 9151737 + 8.01 0.000 Intergenic Intergenic -123981 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr9-4320 chr9 126225914 126226124 + 8.01 0.000 Intergenic THE1C|LTR|ERVL-MaLR 49896 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr18-2824 chr18 6147780 6147990 + 8.01 0.000 intron (NM_001365769, intron 13 of 16) intron (NM_001365769, intron 13 of 16) -108859 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA chr2-6759 chr2 41025642 41025852 + 8.01 0.000 Intergenic L1MA5A|LINE|L1 -513312 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr6-4708 chr6 56771895 56772105 + 8.01 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 71665 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr1-10735 chr1 197944715 197944925 + 8.01 0.000 Intergenic LTR88a|LTR|Gypsy? 27448 NM_001370213 56956 Hs.442578 NM_020204 ENSG00000143355 LHX9 - LIM homeobox 9 protein-coding chr6-8581 chr6 165309295 165309505 + 8.01 0.000 intron (NM_144980, intron 1 of 8) intron (NM_144980, intron 1 of 8) 205 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr5-4210 chr5 122255715 122255925 + 8.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR -55871 NR_131762 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr19-3333 chr19 6744554 6744764 + 8.01 0.000 exon (NM_004240, exon 8 of 14) exon (NM_004240, exon 8 of 14) 4979 NR_110231 9322 Hs.515094 NM_004240 ENSG00000125733 TRIP10 CIP4|HSTP|STOT|STP|TRIP-10 thyroid hormone receptor interactor 10 protein-coding chr7-7038 chr7 134937303 134937513 + 8.01 0.000 intron (NM_033139, intron 4 of 12) intron (NM_033139, intron 4 of 12) 45950 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr7-5750 chr7 74373716 74373926 + 8.01 0.000 intron (NM_003388, intron 9 of 16) intron (NM_003388, intron 9 of 16) -80085 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr19-6367 chr19 12081839 12082049 + 8.01 0.000 TTS (NM_001136501) TTS (NM_001136501) -10353 NM_001348165 388507 Hs.127473 NM_001004314 ZNF788P ZNF788 zinc finger family member 788, pseudogene protein-coding chr2-8645 chr2 146579331 146579541 + 8.01 0.000 Intergenic Intergenic -7621 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr15-2760 chr15 27121093 27121303 + 8.01 0.000 intron (NM_001270873, intron 3 of 5) intron (NM_001270873, intron 3 of 5) 40121 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr3-4314 chr3 169414022 169414232 + 8.01 0.000 intron (NM_001366473, intron 1 of 15) L1P3|LINE|L1 -33740 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr16-3869 chr16 69756619 69756829 + 8.01 0.000 Intergenic Intergenic -1756 NR_074074 28987 Hs.271695 NM_014062 ENSG00000141101 NOB1 ART-4|MST158|MSTP158|NOB1P|PSMD8BP1 NIN1 (RPN12) binding protein 1 homolog protein-coding chr3-5377 chr3 150371838 150372048 + 8.01 0.000 Intergenic Intergenic -36355 NM_014779 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr18-1735 chr18 6156678 6156888 + 8.01 0.000 intron (NM_001365769, intron 13 of 16) intron (NM_001365769, intron 13 of 16) -99961 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA chr11-6172 chr11 44735910 44736120 + 8.01 0.000 intron (NM_130783, intron 1 of 9) MIR|SINE|MIR 9053 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr19-3289 chr19 3814926 3815136 + 8.01 0.000 intron (NM_015174, intron 13 of 18) intron (NM_015174, intron 13 of 18) -13232 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr7-9531 chr7 139842534 139842744 + 8.01 0.000 intron (NM_001366537, intron 1 of 11) intron (NM_001366537, intron 1 of 11) 13375 NM_001166253 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr5-8644 chr5 139901170 139901380 + 8.01 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 105467 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr5-3094 chr5 40109213 40109423 + 8.01 0.000 Intergenic HERVK11-int|LTR|ERVK 57027 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr3-10385 chr3 128993030 128993240 + 8.01 0.000 exon (NM_020741, exon 2 of 8) exon (NM_020741, exon 2 of 8) 941 NM_020741 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr2-4900 chr2 134868266 134868476 + 8.01 0.000 intron (NR_036549, intron 4 of 4) intron (NR_036549, intron 4 of 4) 10551 NR_049856 100847069 NR_049856 ENSG00000263783 MIR5590 - microRNA 5590 ncRNA chr7-7928 chr7 8613122 8613332 + 8.01 0.000 intron (NM_152745, intron 2 of 2) intron (NM_152745, intron 2 of 2) 179618 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr5-8656 chr5 140238615 140238825 + 8.01 0.000 intron (NM_032412, intron 2 of 2) intron (NM_032412, intron 2 of 2) 63532 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr10-5402 chr10 75373164 75373374 + 8.01 0.000 intron (NR_120651, intron 1 of 3) LTR16|LTR|ERVL -28259 NR_024421 100131213 Hs.534598 NR_024421 ENSG00000237149 ZNF503-AS2 C10orf41|NCRNA00245 ZNF503 antisense RNA 2 ncRNA chr3-4819 chr3 132756304 132756514 + 8.01 0.000 intron (NR_002811, intron 3 of 10) L2b|LINE|L2 -33950 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr1-12814 chr1 85756552 85756762 + 8.01 0.000 intron (NR_146345, intron 55 of 59) L1MB3|LINE|L1 -48224 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr7-9434 chr7 133990743 133990953 + 8.01 0.000 intron (NM_021807, intron 14 of 17) L1MA4|LINE|L1 -136492 NM_001365700 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr17-6336 chr17 67577248 67577458 + 8.01 0.000 intron (NM_181671, intron 4 of 9) AluSz|SINE|Alu -105768 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr2-4727 chr2 239428076 239428286 + 8.01 0.000 Intergenic Intergenic 26433 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr15-3064 chr15 61820131 61820341 + 8.01 0.000 Intergenic Intergenic 90318 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr4-3773 chr4 95023875 95024085 + 8.01 0.000 intron (NM_001256792, intron 1 of 10) intron (NM_001256792, intron 1 of 10) -27697 NM_001256793 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr6-2137 chr6 7809512 7809722 + 8.01 0.000 intron (NM_001718, intron 1 of 6) intron (NM_001718, intron 1 of 6) 83518 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr3-5399 chr3 158161097 158161307 + 8.01 0.000 intron (NM_001271834, intron 3 of 8) MLT1I|LTR|ERVL-MaLR 51113 NM_001271838 51319 Hs.591283 NM_016625 ENSG00000174891 RSRC1 BM-011|MRT70|SFRS21|SRrp53 arginine and serine rich coiled-coil 1 protein-coding chr6-7396 chr6 50845474 50845684 + 8.01 0.000 3' UTR (NM_003221, exon 7 of 7) 3' UTR (NM_003221, exon 7 of 7) 26708 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chrX-5238 chrX 136664838 136665048 + 8.01 0.000 TTS (NM_004840) TTS (NM_004840) 16766 NM_000074 959 Hs.592244 NM_000074 ENSG00000102245 CD40LG CD154|CD40L|HIGM1|IGM|IMD3|T-BAM|TNFSF5|TRAP|gp39|hCD40L CD40 ligand protein-coding chr2-6992 chr2 138327859 138328069 + 8.01 0.000 Intergenic L1MC1|LINE|L1 -173806 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr8-4132 chr8 74213103 74213313 + 8.01 0.000 Intergenic (AAGCTTATAT)n|Simple_repeat|Simple_repeat 108153 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr10-8081 chr10 67829052 67829262 + 8.01 0.000 intron (NM_021800, intron 1 of 4) LTR19B|LTR|ERV1 9022 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr1-13227 chr1 215052241 215052451 + 8.01 0.000 intron (NM_001017424, intron 1 of 6) L2a|LINE|L2 -30391 NM_014217 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr8-3935 chr8 42789600 42789810 + 8.01 0.000 Intergenic LOR1b|LTR|ERV1 -20919 NM_001199279 8973 Hs.103128 NM_004198 ENSG00000147434 CHRNA6 CHNRA6 cholinergic receptor nicotinic alpha 6 subunit protein-coding chrX-5290 chrX 141908903 141909113 + 8.01 0.000 3' UTR (NM_005462, exon 4 of 4) 3' UTR (NM_005462, exon 4 of 4) 5114 NM_005462 9947 Hs.132194 NM_005462 ENSG00000155495 MAGEC1 CT7|CT7.1 MAGE family member C1 protein-coding chr2-14345 chr2 218275800 218276010 + 8.01 0.000 intron (NM_001321428, intron 11 of 11) intron (NM_001321428, intron 11 of 11) 4283 NR_106768 102465256 NR_106768 ENSG00000284173 MIR6513 hsa-mir-6513|mir-6513 microRNA 6513 ncRNA chr12-2170 chr12 132411175 132411385 + 8.01 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -78871 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr1-9862 chr1 65276830 65277040 + 8.01 0.000 intron (NM_014787, intron 1 of 18) L1MEg|LINE|L1 12186 NM_014787 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr21-763 chr21 43699861 43700071 + 8.01 0.000 Intergenic Intergenic -19163 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr2-5031 chr2 234304933 234305143 + 8.01 0.000 Intergenic Intergenic 149557 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr2-8508 chr2 128646892 128647102 + 8.01 0.000 Intergenic L2b|LINE|L2 -217603 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr2-5846 chr2 237766231 237766441 + 8.01 0.000 TTS (NM_001137552) TTS (NM_001137552) -32409 NM_001080504 375316 Hs.607265 NM_198852 ENSG00000177483 RBM44 - RNA binding motif protein 44 protein-coding chr6-5604 chr6 41425806 41426016 + 8.01 0.000 Intergenic L2a|LINE|L2 -76533 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr14-1551 chr14 67487907 67488117 + 8.01 0.000 intron (NM_001348546, intron 1 of 2) intron (NM_001348546, intron 1 of 2) 709 NM_001348542 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chrX-4001 chrX 15977922 15978132 + 8.01 0.000 Intergenic Intergenic -123214 NM_001272071 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr6-2463 chr6 36028492 36028702 + 8.01 0.000 intron (NM_139012, intron 1 of 11) intron (NM_139012, intron 1 of 11) 789 NM_139013 1432 Hs.485233 NM_001315 ENSG00000112062 MAPK14 CSBP|CSBP1|CSBP2|CSPB1|EXIP|Mxi2|PRKM14|PRKM15|RK|SAPK2A|p38|p38ALPHA mitogen-activated protein kinase 14 protein-coding chr11-7625 chr11 56666141 56666351 + 8.01 0.000 Intergenic Intergenic 2560 NM_001004730 219493 Hs.553633 NM_001004730 ENSG00000172459 OR5AR1 OR11-209 olfactory receptor family 5 subfamily AR member 1 (gene/pseudogene) protein-coding chr12-5027 chr12 85029355 85029565 + 8.01 0.000 intron (NM_001100917, intron 3 of 8) L1MA5A|LINE|L1 6817 NM_001100917 144448 Hs.156962 NM_001100917 ENSG00000231738 TSPAN19 - tetraspanin 19 protein-coding chrX-2193 chrX 40204009 40204219 + 8.01 0.000 Intergenic Intergenic -26785 NM_001123383 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr2-14163 chr2 204169918 204170128 + 8.01 0.000 Intergenic MER103C|DNA|hAT-Charlie 233275 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr1-10239 chr1 116510471 116510681 + 8.01 0.000 Intergenic Intergenic -31750 NR_125973 101929023 Hs.668091 NR_125972 ENSG00000233154 LINC01762 - long intergenic non-protein coding RNA 1762 ncRNA chr5-4001 chr5 22694637 22694847 + 8.01 0.000 intron (NM_004061, intron 1 of 14) intron (NM_004061, intron 1 of 14) 158602 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr6-5733 chr6 150294194 150294404 + 8.01 0.000 Intergenic Intergenic -74713 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr17-7899 chr17 43791530 43791740 + 8.01 0.000 Intergenic Intergenic 11200 NM_001136483 284067 Hs.252707 NM_001136483 ENSG00000231256 CFAP97D1 C17orf105 CFAP97 domain containing 1 protein-coding chr14-2100 chr14 73235443 73235653 + 8.01 0.000 Intergenic Intergenic -1958 NR_158677 89932 Hs.509909 NM_173462 ENSG00000100767 PAPLN PPN papilin, proteoglycan like sulfated glycoprotein protein-coding chr4-5319 chr4 181377016 181377226 + 8.01 0.000 Intergenic Intergenic -112092 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr2-9016 chr2 196696221 196696431 + 8.01 0.000 intron (NM_001080539, intron 14 of 27) intron (NM_001080539, intron 14 of 27) 16686 NR_034036 100130452 Hs.591625 NR_034036 LOC100130452 - uncharacterized LOC100130452 ncRNA chr2-8013 chr2 69095346 69095556 + 8.01 0.000 intron (NM_032208, intron 9 of 17) L2c|LINE|L2 -8231 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr6-5762 chr6 160455632 160455842 + 8.01 0.000 Intergenic Intergenic 55387 NR_028093 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr3-4815 chr3 131526854 131527064 + 8.01 0.000 Intergenic CpG -23988 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr3-8950 chr3 14736575 14736785 + 8.01 0.000 intron (NM_001184957, intron 12 of 16) AluSz|SINE|Alu 61539 NM_032137 84077 Hs.661452 NM_032137 ENSG00000131379 C3orf20 - chromosome 3 open reading frame 20 protein-coding chr12-5089 chr12 94475081 94475291 + 8.01 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -14732 NM_001368038 51134 Hs.279209 NM_016122 ENSG00000173588 CEP83 CCDC41|NPHP18|NY-REN-58 centrosomal protein 83 protein-coding chr8-4420 chr8 108408011 108408221 + 8.01 0.000 Intergenic Intergenic -35467 NM_001329494 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr10-5267 chr10 68052024 68052234 + 8.01 0.000 intron (NM_001278185, intron 3 of 23) intron (NM_001278185, intron 3 of 23) 23154 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr1-8883 chr1 5250227 5250437 + 8.01 0.000 Intergenic LTR33A_|LTR|ERVL 595723 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr18-1295 chr18 63201810 63202020 + 8.01 0.000 intron (NM_000633, intron 2 of 2) L1PA7|LINE|L1 117465 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr4-6691 chr4 3219223 3219433 + 8.01 0.000 intron (NM_002111, intron 52 of 66) intron (NM_002111, intron 52 of 66) -25041 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr22-1502 chr22 38440948 38441158 + 8.01 0.000 intron (NM_152868, intron 1 of 1) intron (NM_152868, intron 1 of 1) 2975 NM_004981 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr4-3024 chr4 129245844 129246054 + 8.01 0.000 Intergenic Intergenic 149797 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chrX-2161 chrX 37677179 37677389 + 8.01 0.000 3' UTR (NM_001170331, exon 5 of 5) 3' UTR (NM_001170331, exon 5 of 5) -8507 NM_021083 7504 Hs.78919 NM_021083 ENSG00000047597 XK KX|NA|NAC|X1k|XKR1 X-linked Kx blood group protein-coding chr10-7410 chr10 4162852 4163062 + 8.01 0.000 Intergenic Intergenic 80955 NR_108040 100652988 Hs.433011 NR_108040 LINC00702 - long intergenic non-protein coding RNA 702 ncRNA chr5-7638 chr5 51567107 51567317 + 8.01 0.000 Intergenic Intergenic 183764 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding chr13-4472 chr13 113179876 113180086 + 8.01 0.000 exon (NM_001320656, exon 12 of 15) exon (NM_001320656, exon 12 of 15) 21327 NM_001256134 8858 Hs.1011 NM_003891 ENSG00000126231 PROZ PZ protein Z, vitamin K dependent plasma glycoprotein protein-coding chr1-14153 chr1 32378687 32378897 + 8.01 0.000 non-coding (NR_125352, exon 6 of 12) non-coding (NR_125352, exon 6 of 12) 15649 NM_001300958 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 - BSD domain containing 1 protein-coding chr16-3647 chr16 86334558 86334768 + 8.01 0.000 intron (NR_024406, intron 4 of 6) intron (NR_024406, intron 4 of 6) 11016 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr8-7350 chr8 135074956 135075166 + 8.01 0.000 Intergenic MER5A|DNA|hAT-Charlie -159070 NR_120396 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA chr16-4831 chr16 87539629 87539839 + 8.01 0.000 Intergenic Intergenic 45547 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr1-11128 chr1 233509551 233509761 + 8.01 0.000 Intergenic Intergenic -104450 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr2-10780 chr2 43301027 43301237 + 8.01 0.000 intron (NM_001083953, intron 31 of 37) MER5B|DNA|hAT-Charlie 73921 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr5-3349 chr5 136728935 136729145 + 8.01 0.000 Intergenic Intergenic -363564 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr6-4180 chr6 2182045 2182255 + 8.01 0.000 intron (NM_001500, intron 1 of 10) Tigger1|DNA|TcMar-Tigger -6159 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr6-4224 chr6 4914586 4914796 + 8.01 0.000 intron (NM_001368126, intron 2 of 6) intron (NM_001368126, intron 2 of 6) 24651 NM_001143971 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr6-7358 chr6 47859194 47859404 + 8.01 0.000 Intergenic Intergenic 72231 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr21-1054 chr21 28636931 28637141 + 8.01 0.000 Intergenic Intergenic 97718 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr18-2220 chr18 66581640 66581850 + 8.01 0.000 intron (NM_001271028, intron 1 of 9) MLT2A2|LTR|ERVL 22345 NM_001271028 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr22-3703 chr22 24795953 24796163 + 8.01 0.000 Intergenic L1MB5|LINE|L1 -10153 NM_001039948 129049 Hs.474397 NM_133454 ENSG00000167037 SGSM1 RUTBC2 small G protein signaling modulator 1 protein-coding chr4-3016 chr4 127624933 127625143 + 8.01 0.000 Intergenic Intergenic -7919 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr11-10331 chr11 109742505 109742715 + 8.01 0.000 Intergenic L2a|LINE|L2 320420 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr20-1431 chr20 42204854 42205064 + 8.01 0.000 intron (NM_133170, intron 16 of 31) L3|LINE|CR1 -480524 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr1-13852 chr1 20389676 20389886 + 8.01 0.000 intron (NR_033887, intron 6 of 11) intron (NR_033887, intron 6 of 11) 39013 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr5-3340 chr5 134209935 134210145 + 8.01 0.000 intron (NM_002715, intron 1 of 6) AluJr|SINE|Alu 15514 NR_149151 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr18-1646 chr18 57877323 57877533 + 8.01 0.000 Intergenic L2|LINE|L2 -74113 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr11-7423 chr11 108399604 108399814 + 8.01 0.000 intron (NM_001330368, intron 4 of 6) ERVL-E-int|LTR|ERVL 67820 NM_001351110 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr3-5436 chr3 173151081 173151291 + 8.01 0.000 Intergenic L1MA1|LINE|L1 -9951 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr8-6911 chr8 102374717 102374927 + 8.01 0.000 intron (NM_001282873, intron 1 of 58) L2c|LINE|L2 37867 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr9-6637 chr9 132806337 132806547 + 8.01 0.000 intron (NM_001317959, intron 12 of 14) intron (NM_001317959, intron 12 of 14) -71902 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr2-7507 chr2 20125876 20126086 + 8.01 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -74353 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr17-7296 chr17 3990210 3990420 + 8.01 0.000 Intergenic AluSg4|SINE|Alu 13212 NR_146884 105371496 Hs.579239 NR_146884 LINC01975 - long intergenic non-protein coding RNA 1975 ncRNA chr13-4393 chr13 109446778 109446988 + 8.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR 46187 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr5-2254 chr5 16620688 16620898 + 8.01 0.000 intron (NR_109946, intron 1 of 3) intron (NR_109946, intron 1 of 3) -3735 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr11-3654 chr11 115147601 115147811 + 8.01 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -185871 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr3-9988 chr3 99413386 99413596 + 8.01 0.000 Intergenic Intergenic -225103 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr7-5555 chr7 46211129 46211339 + 8.01 0.000 Intergenic Intergenic -289962 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr4-3515 chr4 151068148 151068358 + 8.01 0.000 Intergenic L1MB7|LINE|L1 -31320 NM_001267699 6189 Hs.356572 NM_001006 ENSG00000145425 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding chr13-3322 chr13 59449814 59450024 + 8.01 0.000 Intergenic Intergenic -562799 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr22-2689 chr22 37224630 37224840 + 8.01 0.000 TTS (NM_002872) TTS (NM_002872) -12258 NM_001051 6753 Hs.225995 NM_001051 ENSG00000278195 SSTR3 SS-3-R|SS3-R|SS3R|SSR-28 somatostatin receptor 3 protein-coding chr15-4223 chr15 26985633 26985843 + 8.01 0.000 intron (NM_001270873, intron 2 of 5) intron (NM_001270873, intron 2 of 5) 14557 NM_033223 2567 Hs.569475 NM_033223 ENSG00000182256 GABRG3 - gamma-aminobutyric acid type A receptor gamma3 subunit protein-coding chr6-7915 chr6 109350238 109350448 + 8.01 0.000 intron (NR_152435, intron 44 of 45) intron (NR_152435, intron 44 of 45) 31396 NM_001346500 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr1-6229 chr1 220274847 220275057 + 8.01 0.000 Intergenic MIRb|SINE|MIR -2499 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr15-3372 chr15 85614152 85614362 + 8.01 0.000 intron (NM_007200, intron 8 of 36) L3|LINE|CR1 -5693 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr13-2711 chr13 93327283 93327493 + 8.01 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 100581 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr10-2147 chr10 72260195 72260405 + 8.01 0.000 Intergenic Intergenic -13624 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr6-6197 chr6 13568528 13568738 + 8.01 0.000 Intergenic HAL1|LINE|L1 -5896 NM_001242827 23408 Hs.567431 NM_012241 ENSG00000124523 SIRT5 SIR2L5 sirtuin 5 protein-coding chr18-1523 chr18 8437581 8437791 + 8.01 0.000 Intergenic Intergenic -70652 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr13-4374 chr13 107941428 107941638 + 8.01 0.000 Intergenic L1PA15-16|LINE|L1 -74037 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding chr10-6397 chr10 5259799 5260009 + 8.01 0.000 Intergenic Intergenic 11332 NR_149060 110806285 NR_149060 ENSG00000224034 LINC02561 - long intergenic non-protein coding RNA 2561 ncRNA chr3-5931 chr3 43759990 43760200 + 8.01 0.000 Intergenic Intergenic -68501 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr15-2906 chr15 43276955 43277165 + 8.01 0.000 intron (NM_052955, intron 11 of 12) intron (NM_052955, intron 11 of 12) -10132 NM_004245 9333 Hs.129719 NM_004245 ENSG00000104055 TGM5 PSS2|TGASE5|TGASEX|TGM6|TGMX|TGX transglutaminase 5 protein-coding chr2-8789 chr2 167062453 167062663 + 8.01 0.000 intron (NM_152381, intron 2 of 10) L1MEc|LINE|L1 78397 NR_046665 100874011 NR_046665 XIRP2-AS1 - XIRP2 antisense RNA 1 ncRNA chr2-9078 chr2 202584988 202585198 + 8.01 0.000 Intergenic SATR2|Satellite|Satellite -49876 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr3-10271 chr3 124381236 124381446 + 8.01 0.000 intron (NM_001024660, intron 10 of 59) L2c|LINE|L2 7009 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr11-5990 chr11 20219639 20219849 + 8.01 0.000 Intergenic (CATAC)n|Simple_repeat|Simple_repeat -59269 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chrX-4452 chrX 56260207 56260417 + 8.01 0.000 intron (NM_001324100, intron 2 of 3) MLT1C|LTR|ERVL-MaLR 27154 NM_001324099 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr18-1912 chr18 33228682 33228892 + 8.01 0.000 intron (NM_001308126, intron 15 of 23) intron (NM_001308126, intron 15 of 23) 211784 NM_001371121 chr7-8827 chr7 85380122 85380332 + 8.01 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -40895 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr1-13320 chr1 240555588 240555798 + 8.01 0.000 intron (NM_022469, intron 1 of 1) (AGAGATA)n|Simple_repeat|Simple_repeat 56462 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr1-11159 chr1 237420892 237421102 + 8.01 0.000 intron (NM_001035, intron 11 of 104) AluSc8|SINE|Alu -50122 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr1-7145 chr1 204993719 204993929 + 8.01 0.000 intron (NM_001160332, intron 25 of 27) intron (NM_001160332, intron 25 of 27) -49125 NM_001346083 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr2-4533 chr2 39530693 39530903 + 8.01 0.000 intron (NR_037875, intron 5 of 5) intron (NR_037875, intron 5 of 5) 93382 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr7-4500 chr7 156469784 156469994 + 8.01 0.000 Intergenic Intergenic -24301 NR_038232 285889 Hs.407095 NR_038232 ENSG00000182648 LOC285889 - uncharacterized LOC285889 ncRNA chr14-3176 chr14 70434321 70434531 + 8.01 0.000 Intergenic HERVL-int|LTR|ERVL -17336 NM_001202548 100529257 Hs.443661 NM_001202547 ENSG00000258644 SYNJ2BP-COX16 - SYNJ2BP-COX16 readthrough protein-coding chr14-3808 chr14 67726330 67726540 + 8.01 0.000 intron (NM_152443, intron 6 of 8) intron (NM_152443, intron 6 of 8) 24549 NM_152443 145226 Hs.415322 NM_152443 ENSG00000139988 RDH12 LCA13|RP53|SDR7C2 retinol dehydrogenase 12 protein-coding chr7-4169 chr7 106239166 106239376 + 8.01 0.000 Intergenic Intergenic 45712 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr20-2241 chr20 473659 473869 + 8.01 0.000 3' UTR (NM_001895, exon 13 of 13) 3' UTR (NM_001895, exon 13 of 13) -11231 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding chrX-2264 chrX 48251903 48252113 + 8.01 0.000 Intergenic MLT1D-int|LTR|ERVL-MaLR -3384 NM_005635 6756 Hs.434142 NM_005635 ENSG00000126752 SSX1 CT5.1|SSRC SSX family member 1 protein-coding chr7-6523 chr7 32385549 32385759 + 8.01 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 42570 NM_001322059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr11-9309 chr11 45749531 45749741 + 8.01 0.000 Intergenic HAL1|LINE|L1 -21796 NR_027134 374387 Hs.632142 NM_199137 ENSG00000205106 LINC02716 DKFZp779M0652 long intergenic non-protein coding RNA 2716 ncRNA chr7-3603 chr7 31055873 31056083 + 8.01 0.000 intron (NM_001199637, intron 1 of 13) intron (NM_001199637, intron 1 of 13) 3517 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr8-5920 chr8 18257748 18257958 + 8.01 0.000 Intergenic L1MCc|LINE|L1 36185 NM_001160174 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr10-4898 chr10 20510923 20511133 + 8.01 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -40942 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr3-11227 chr3 195292742 195292952 + 8.01 0.000 intron (NM_012287, intron 18 of 22) AluSx1|SINE|Alu -21688 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr3-5260 chr3 109532375 109532585 + 8.01 0.000 Intergenic L1M1|LINE|L1 -70348 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr8-6912 chr8 102382948 102383158 + 8.01 0.000 intron (NM_001282873, intron 1 of 58) HAL1|LINE|L1 29636 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr8-4613 chr8 131905173 131905383 + 8.01 0.000 5' UTR (NM_001323554, exon 1 of 23) 5' UTR (NM_001323554, exon 1 of 23) 1185 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr5-6128 chr5 32151915 32152125 + 8.01 0.000 intron (NM_022130, intron 1 of 3) L1MB3|LINE|L1 22299 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr7-8923 chr7 95320862 95321072 + 8.01 0.000 intron (NM_000446, intron 1 of 8) MSTB1|LTR|ERVL-MaLR 3565 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr11-10659 chr11 127283262 127283472 + 8.01 0.000 intron (NR_120580, intron 1 of 2) intron (NR_120580, intron 1 of 2) 12297 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr18-1656 chr18 60751596 60751806 + 8.01 0.000 Intergenic L1MDb|LINE|L1 -378926 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr6-4131 chr6 161906947 161907157 + 8.01 0.000 intron (NM_004562, intron 6 of 11) MLT2A2|LTR|ERVL 436075 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr22-4135 chr22 44605739 44605949 + 8.01 0.000 TTS (NR_044991) TTS (NR_044991) 19575 NR_044991 414351 Hs.572878 NR_044991 LINC00229 C22orf10|NCRNA00229|dJ474I12.C22.2 long intergenic non-protein coding RNA 229 ncRNA chr16-3502 chr16 11824683 11824893 + 8.01 0.000 intron (NR_024049, intron 1 of 3) intron (NR_024049, intron 1 of 3) 4044 NR_131222 400500 Hs.24611 NR_024049 ENSG00000262117 BCAR4 - breast cancer anti-estrogen resistance 4 ncRNA chr4-3338 chr4 2441765 2441975 + 8.01 0.000 intron (NM_001193282, intron 4 of 15) intron (NM_001193282, intron 4 of 15) 22915 NM_001193282 402160 Hs.443116 NM_001193282 ENSG00000206113 CFAP99 - cilia and flagella associated protein 99 protein-coding chr1-12870 chr1 107743927 107744137 + 8.01 0.000 intron (NM_006113, intron 15 of 26) intron (NM_006113, intron 15 of 26) -55533 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr12-7183 chr12 49429588 49429798 + 8.01 0.000 intron (NM_001293285, intron 3 of 14) AluSz|SINE|Alu 40519 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr1-14706 chr1 64240362 64240572 + 8.01 0.000 intron (NR_158768, intron 8 of 9) L3|LINE|CR1 36844 NM_001366234 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding chr9-3729 chr9 115297036 115297246 + 8.01 0.000 intron (NR_163556, intron 3 of 7) intron (NR_163556, intron 3 of 7) 155323 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chrX-5414 chrX 153240709 153240919 + 8.01 0.000 Intergenic AluSc|SINE|Alu 61530 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chr3-4127 chr3 115648851 115649061 + 8.01 0.000 intron (NM_002045, intron 1 of 2) L2|LINE|L2 25446 NM_001130064 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr16-6507 chr16 60206818 60207028 + 8.01 0.000 Intergenic Intergenic 152870 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr10-7151 chr10 101650346 101650556 + 8.01 0.000 intron (NR_136613, intron 4 of 7) intron (NR_136613, intron 4 of 7) 44719 NM_022039 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr12-2285 chr12 111562633 111562843 + 8.01 0.000 intron (NM_001310121, intron 1 of 25) AluSp|SINE|Alu 36577 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr15-5143 chr15 90738314 90738524 + 8.01 0.000 intron (NM_001287246, intron 2 of 22) AluJb|SINE|Alu 21073 NM_001287248 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|MGRISCE1|RECQ2|RECQL2|RECQL3 BLM RecQ like helicase protein-coding chr5-7084 chr5 176565840 176566050 + 8.01 0.000 intron (NM_017675, intron 3 of 31) intron (NM_017675, intron 3 of 31) 16603 NM_017675 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding chr19-4184 chr19 42155830 42156040 + 8.01 0.000 Intergenic (AAAGG)n|Simple_repeat|Simple_repeat -22422 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr8-3972 chr8 50950194 50950404 + 8.01 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 786168 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr5-5239 chr5 118363444 118363654 + 8.01 0.000 intron (NR_104610, intron 9 of 9) intron (NR_104610, intron 9 of 9) 80975 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr6-5261 chr6 137342838 137343048 + 8.01 0.000 Intergenic Intergenic -123513 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr2-7188 chr2 210177918 210178128 + 8.01 0.000 Intergenic LTR75|LTR|ERVL -6614 NM_152519 151050 Hs.282260 NM_152519 ENSG00000144445 KANSL1L C2orf67|MSL1v2 KAT8 regulatory NSL complex subunit 1 like protein-coding chr15-4448 chr15 46988756 46988966 + 8.01 0.000 Intergenic MLT2A2|LTR|ERVL -195228 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr20-3843 chr20 24782402 24782612 + 8.01 0.000 Intergenic Intergenic -166762 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr11-4833 chr11 13848087 13848297 + 8.01 0.000 TTS (NR_149108) TTS (NR_149108) 22424 NR_149109 105376561 Hs.512244 NR_149109 ENSG00000254930 LINC02545 - long intergenic non-protein coding RNA 2545 ncRNA chr1-12056 chr1 116820614 116820824 + 8.01 0.000 Intergenic Intergenic 66289 NM_001328609 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding chr5-1472 chr5 80346785 80346995 + 8.01 0.000 Intergenic AluSx1|SINE|Alu 5076 NR_003665 441089 Hs.568291 NR_003665 CRSP8P - mediator complex subunit 27 pseudogene pseudo chr4-5156 chr4 154919267 154919477 + 8.01 0.000 Intergenic HERVH-int|LTR|ERV1 137867 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr17-3806 chr17 40549748 40549958 + 8.01 0.000 Intergenic Intergenic 10541 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr6-7430 chr6 53623484 53623694 + 8.01 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -4791 NR_125841 101927171 Hs.334005 NR_125841 ENSG00000235899 LINC01564 TCONS_00011314|XLOC_005327 long intergenic non-protein coding RNA 1564 ncRNA chrX-1908 chrX 140627260 140627470 + 8.01 0.000 Intergenic Intergenic -82394 NR_028344 286411 Hs.317627 NR_028344 ENSG00000203930 LINC00632 ASINC long intergenic non-protein coding RNA 632 ncRNA chr22-1056 chr22 50032920 50033130 + 8.01 0.000 intron (NM_001350317, intron 11 of 13) intron (NM_001350317, intron 11 of 13) -20260 NM_001371417 chrX-1401 chrX 10633748 10633958 + 8.01 0.000 intron (NM_033290, intron 1 of 9) MER34A|LTR|ERV1 -13268 NM_033289 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr1-13146 chr1 201773727 201773937 + 8.01 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 33932 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr10-3615 chr10 93806935 93807145 + 8.01 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 49104 NM_005097 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr5-7790 chr5 64459909 64460119 + 8.01 0.000 Intergenic L1M2|LINE|L1 -46001 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr15-3669 chr15 27861264 27861474 + 8.01 0.000 intron (NM_001300984, intron 20 of 22) intron (NM_001300984, intron 20 of 22) 237946 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr3-3191 chr3 187717663 187717873 + 8.01 0.000 intron (NR_034062, intron 2 of 2) intron (NR_034062, intron 2 of 2) -15211 NM_001004312 344892 Hs.567872 NM_001004312 ENSG00000198471 RTP2 Z3CXXC2 receptor transporter protein 2 protein-coding chrX-2756 chrX 129676600 129676810 + 8.01 0.000 Intergenic Intergenic -21749 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr11-10451 chr11 117273765 117273975 + 8.01 0.000 intron (NM_001077239, intron 6 of 14) LTR26|LTR|ERV1 -17476 NR_037803 100379571 Hs.736305 NR_037803 BACE1-AS BACE1-AS1|BACE1AS|NCRNA00177 BACE1 antisense RNA ncRNA chr2-6897 chr2 96146325 96146535 + 8.01 0.000 promoter-TSS (NM_004418) promoter-TSS (NM_004418) -990 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr1-16028 chr1 200864506 200864716 + 8.01 0.000 Intergenic Intergenic -8370 NM_005298 2848 Hs.534316 NM_005298 ENSG00000170128 GPR25 - G protein-coupled receptor 25 protein-coding chr16-6429 chr16 56370315 56370525 + 8.01 0.000 intron (NM_001144, intron 10 of 13) L1ME1|LINE|L1 54569 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr5-7271 chr5 13525507 13525717 + 8.01 0.000 Intergenic Intergenic 418868 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr12-5784 chr12 7303817 7304027 + 8.01 0.000 promoter-TSS (NM_001080454) promoter-TSS (NM_001080454) -410 NM_001080454 341392 Hs.450804 NM_001080454 ENSG00000215009 ACSM4 - acyl-CoA synthetase medium chain family member 4 protein-coding chr11-10388 chr11 113366354 113366564 + 8.01 0.000 TTS (NM_017868) TTS (NM_017868) -21320 NM_178510 255239 Hs.448473 NM_178510 ENSG00000170209 ANKK1 PKK2|sgK288 ankyrin repeat and kinase domain containing 1 protein-coding chr4-7767 chr4 94503858 94504068 + 8.01 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 52021 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr6-5145 chr6 124626370 124626580 + 8.01 0.000 intron (NM_001300738, intron 4 of 7) intron (NM_001300738, intron 4 of 7) -336070 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr10-8893 chr10 114120619 114120829 + 8.01 0.000 TTS (NR_135815) TTS (NR_135815) 53455 NR_031747 100302224 NR_031747 ENSG00000284442 MIR2110 hsa-mir-2110|mir-2110 microRNA 2110 ncRNA chr11-4288 chr11 66880883 66881093 + 8.01 0.000 intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) 23924 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr1-6776 chr1 79404856 79405066 + 8.01 0.000 Intergenic Intergenic -398231 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr7-5353 chr7 30177559 30177769 + 8.01 0.000 Intergenic Intergenic 42678 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr6-2140 chr6 10259778 10259988 + 8.01 0.000 Intergenic Intergenic -144619 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr7-6133 chr7 123438903 123439113 + 8.01 0.000 Intergenic ERVL-E-int|LTR|ERVL 93940 NM_001282855 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr9-8804 chr9 134463928 134464138 + 8.01 0.000 Intergenic Intergenic 57473 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr12-7498 chr12 67645573 67645783 + 8.01 0.000 Intergenic AluSq|SINE|Alu -3067 NM_006482 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr12-8343 chr12 131659654 131659864 + 8.01 0.000 Intergenic Intergenic -11638 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr6-4157 chr6 516774 516984 + 8.01 0.000 intron (NM_018303, intron 23 of 27) intron (NM_018303, intron 23 of 27) 125127 NM_001195286 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr6-4594 chr6 43924366 43924576 + 8.01 0.000 intron (NR_024478, intron 1 of 1) MamRTE1|LINE|RTE-BovB 33443 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr11-4145 chr11 46397587 46397797 + 8.01 0.000 exon (NM_017749, exon 19 of 19) exon (NM_017749, exon 19 of 19) -6024 NM_001366692 1132 Hs.248100 NM_000741 ENSG00000180720 CHRM4 HM4|M4R cholinergic receptor muscarinic 4 protein-coding chr19-4831 chr19 36184346 36184556 + 8.01 0.000 intron (NM_001366188, intron 4 of 4) AluSz|SINE|Alu 29128 NM_001366189 147929 Hs.596338 NM_152477 ENSG00000196357 ZNF565 - zinc finger protein 565 protein-coding chr6-2634 chr6 158019319 158019529 + 8.01 0.000 intron (NM_003898, intron 2 of 26) intron (NM_003898, intron 2 of 26) 2331 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr21-1182 chr21 42829260 42829470 + 8.01 0.000 Intergenic L1MA2|LINE|L1 -49371 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr7-2494 chr7 18873776 18873986 + 8.01 0.000 intron (NM_058176, intron 20 of 22) intron (NM_058176, intron 20 of 22) 243755 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr17-5040 chr17 2107894 2108104 + 8.01 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -19238 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr6-7909 chr6 109139149 109139359 + 8.01 0.000 intron (NM_173830, intron 1 of 10) Tigger7|DNA|TcMar-Tigger 9950 NM_173830 285753 Hs.632616 NM_173830 ENSG00000183137 CEP57L1 C6orf182|bA487F23.2|cep57R centrosomal protein 57 like 1 protein-coding chr5-7468 chr5 32995265 32995475 + 8.01 0.000 Intergenic Intergenic 47927 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr16-2672 chr16 68091689 68091899 + 8.01 0.000 intron (NM_004555, intron 1 of 10) intron (NM_004555, intron 1 of 10) 6424 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr10-9041 chr10 123858536 123858746 + 8.01 0.000 intron (NM_198148, intron 3 of 13) MIR|SINE|MIR 33166 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr4-4363 chr4 39370215 39370425 + 8.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR -3958 NM_002913 5981 Hs.507475 NM_002913 ENSG00000035928 RFC1 A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C subunit 1 protein-coding chr15-4783 chr15 71109224 71109434 + 8.01 0.000 Intergenic Intergenic -32120 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr2-5889 chr2 241039587 241039797 + 8.01 0.000 intron (NM_001080437, intron 6 of 31) intron (NM_001080437, intron 6 of 31) 41074 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr11-5880 chr11 11636211 11636421 + 8.01 0.000 Intergenic Intergenic -14311 NM_001363464 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr2-7360 chr2 1886519 1886729 + 8.01 0.000 intron (NM_015025, intron 17 of 24) intron (NM_015025, intron 17 of 24) -142109 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr6-6604 chr6 146722317 146722527 + 8.01 0.000 intron (NM_024694, intron 17 of 35) L2a|LINE|L2 81402 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr18-1023 chr18 62030625 62030835 + 8.01 0.000 Intergenic Intergenic -137723 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr12-7936 chr12 108899403 108899613 + 8.01 0.000 intron (NM_001917, intron 10 of 10) intron (NM_001917, intron 10 of 10) 19416 NM_001917 1610 Hs.113227 NM_001917 ENSG00000110887 DAO DAAO|DAMOX|OXDA D-amino acid oxidase protein-coding chr18-1920 chr18 33756021 33756231 + 8.01 0.000 Intergenic Intergenic 177907 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr18-1781 chr18 11243632 11243842 + 8.01 0.000 Intergenic L2b|LINE|L2 -94975 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr17-4756 chr17 42939348 42939558 + 8.01 0.000 Intergenic AluSc|SINE|Alu 25001 NM_001261434 80755 Hs.317403 NM_001261434 ENSG00000266967 AARSD1 - alanyl-tRNA synthetase domain containing 1 protein-coding chr6-7685 chr6 85834843 85835053 + 8.01 0.000 Intergenic L1PA4|LINE|L1 -156215 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr9-8373 chr9 117945230 117945440 + 8.01 0.000 Intergenic L2c|LINE|L2 240932 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr11-9502 chr11 62991383 62991593 + 8.01 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -6521 NM_153278 9356 Hs.369252 NM_004790 ENSG00000197901 SLC22A6 HOAT1|OAT1|PAHT|ROAT1 solute carrier family 22 member 6 protein-coding chr1-11959 chr1 73626648 73626858 + 8.01 0.000 Intergenic L1M1|LINE|L1 -47926 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA chrX-3041 chrX 97677586 97677796 + 8.01 0.000 Intergenic AluJr|SINE|Alu -113156 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr10-8245 chr10 74302428 74302638 + 8.01 0.000 intron (NM_001369124, intron 3 of 9) AluJb|SINE|Alu 125770 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr5-7836 chr5 68502748 68502958 + 8.01 0.000 Intergenic LTR33|LTR|ERVL 210276 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr11-5564 chr11 102172975 102173185 + 8.01 0.000 intron (NM_001282097, intron 3 of 7) L2a|LINE|L2 60632 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr4-5788 chr4 79464948 79465158 + 8.01 0.000 Intergenic Intergenic -27540 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr1-10845 chr1 204398472 204398682 + 8.01 0.000 Intergenic Intergenic 13240 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr1-9435 chr1 33945406 33945616 + 8.01 0.000 intron (NM_052896, intron 3 of 69) intron (NM_052896, intron 3 of 69) 76555 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr12-7558 chr12 72375559 72375769 + 8.01 0.000 intron (NM_013381, intron 2 of 18) intron (NM_013381, intron 2 of 18) -102155 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr10-6073 chr10 130426513 130426723 + 8.01 0.000 Intergenic Intergenic 290209 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr13-3658 chr13 32733343 32733553 + 8.01 0.000 intron (NM_015032, intron 20 of 34) intron (NM_015032, intron 20 of 34) 146996 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr4-6973 chr4 21326995 21327205 + 8.01 0.000 intron (NM_147182, intron 2 of 8) L1MA3|LINE|L1 -23194 NM_147183 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr1-15156 chr1 106651559 106651769 + 8.01 0.000 Intergenic HAL1M8|LINE|L1 -166575 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr5-1407 chr5 150589729 150589939 + 8.01 0.000 Intergenic Intergenic -11242 NM_001166208 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr20-3523 chr20 191649 191859 + 8.01 0.000 Intergenic HERV17-int|LTR|ERV1 -2043 NM_001037732 245939 Hs.516818 NM_001037732 ENSG00000185982 DEFB128 DEFB-28|DEFB28|hBD-28 defensin beta 128 protein-coding chr11-4393 chr11 77202850 77203060 + 8.01 0.000 intron (NM_001127180, intron 37 of 48) intron (NM_001127180, intron 37 of 48) 74709 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr5-8192 chr5 105808552 105808762 + 8.01 0.000 Intergenic Intergenic 709183 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr22-3008 chr22 21660404 21660614 + 8.01 0.000 Intergenic Intergenic -5475 NM_001317996 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr3-5378 chr3 150911691 150911901 + 8.01 0.000 Intergenic Intergenic -6357 NM_001351281 646951 Hs.380222 NM_001351281 MINDY4B C3orf76|FAM188B2 MINDY family member 4B protein-coding chr17-7326 chr17 5398413 5398623 + 8.01 0.000 intron (NM_002532, intron 8 of 16) AluSx|SINE|Alu -21123 NM_001160244 84268 Hs.462086 NM_032308 ENSG00000129197 RPAIN HRIP|RIP RPA interacting protein protein-coding chr8-1098 chr8 32766257 32766467 + 8.01 0.000 3' UTR (NM_001159995, exon 11 of 11) 3' UTR (NM_001159995, exon 11 of 11) 44527 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr12-5960 chr12 84728169 84728379 + 8.01 0.000 Intergenic Intergenic 184525 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr9-3280 chr9 37084788 37084998 + 8.01 0.000 intron (NR_036592, intron 1 of 1) MER58A|DNA|hAT-Charlie 4997 NR_036592 100506710 Hs.446271 NR_036592 ENSG00000281649 EBLN3P EBLN3 endogenous Bornavirus like nucleoprotein 3, pseudogene pseudo chr3-10923 chr3 173113767 173113977 + 8.01 0.000 intron (NM_031955, intron 2 of 10) intron (NM_031955, intron 2 of 10) 27363 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr4-8148 chr4 128600365 128600575 + 8.01 0.000 Intergenic Intergenic 172454 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr11-3364 chr11 124030260 124030470 + 8.01 0.000 exon (NM_001004464, exon 1 of 1) exon (NM_001004464, exon 1 of 1) 742 NM_001004464 219869 Hs.553635 NM_001004464 ENSG00000234560 OR10G8 OR11-274|OR11-282 olfactory receptor family 10 subfamily G member 8 protein-coding chr12-8149 chr12 120989925 120990135 + 8.01 0.000 intron (NM_001306179, intron 2 of 9) intron (NM_001306179, intron 2 of 9) 11462 NM_000545 6927 Hs.654455 NM_000545 ENSG00000135100 HNF1A HNF-1A|HNF1|HNF4A|IDDM20|LFB1|MODY3|TCF-1|TCF1 HNF1 homeobox A protein-coding chr10-3177 chr10 86672591 86672801 + 8.01 0.000 intron (NM_001368066, intron 2 of 14) intron (NM_001368066, intron 2 of 14) 4132 NM_001080116 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr11-6805 chr11 92155966 92156176 + 8.01 0.000 Intergenic Intergenic -68963 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr7-5911 chr7 97541260 97541470 + 8.01 0.000 Intergenic LTR12C|LTR|ERV1 -190721 NM_013997 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding chr3-5164 chr3 60550824 60551034 + 8.01 0.000 intron (NM_001320900, intron 5 of 9) L2a|LINE|L2 66941 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chrX-4865 chrX 105072194 105072404 + 8.01 0.000 intron (NM_017416, intron 2 of 10) THE1C|LTR|ERVL-MaLR 148394 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr14-2092 chr14 72497997 72498207 + 8.01 0.000 intron (NM_001370280, intron 13 of 17) intron (NM_001370280, intron 13 of 17) -18718 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr5-4224 chr5 128578925 128579135 + 8.01 0.000 Intergenic Intergenic -40785 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr4-3417 chr4 61595554 61595764 + 8.01 0.000 intron (NM_001371343, intron 5 of 23) L1M1|LINE|L1 393487 NM_001371342 chr3-4232 chr3 139430630 139430840 + 8.01 0.000 intron (NR_121609, intron 3 of 4) intron (NR_121609, intron 3 of 4) 40932 NR_121609 100507291 Hs.97661 NR_121608 ENSG00000248932 LOC100507291 - uncharacterized LOC100507291 ncRNA chr2-7579 chr2 25221727 25221937 + 8.01 0.000 Intergenic L2a|LINE|L2 17519 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr7-4267 chr7 5114835 5115045 + 8.01 0.000 Intergenic AluJo|SINE|Alu 29606 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr6-6161 chr6 3538027 3538237 + 8.01 0.000 Intergenic Intergenic -81573 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr15-2769 chr15 33059156 33059366 + 8.01 0.000 intron (NM_001277313, intron 6 of 20) L1MA7|LINE|L1 8913 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr1-9992 chr1 83690439 83690649 + 8.01 0.000 intron (NR_119375, intron 2 of 2) MSTA|LTR|ERVL-MaLR 170002 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr1-10065 chr1 92819859 92820069 + 8.01 0.000 Intergenic L2a|LINE|L2 -12022 NR_146333 6125 Hs.532359 NM_000969 ENSG00000122406 RPL5 L5|MSTP030|PPP1R135|uL18 ribosomal protein L5 protein-coding chr6-5341 chr6 146415180 146415390 + 8.01 0.000 intron (NM_001278067, intron 7 of 7) MLT1A0|LTR|ERVL-MaLR -128548 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr22-2454 chr22 20249305 20249515 + 8.01 0.000 promoter-TSS (NR_031618) promoter-TSS (NR_031618) -199 NR_031618 100302118 NR_031618 ENSG00000221039 MIR1286 MIRN1286|hsa-mir-1286|mir-1286 microRNA 1286 ncRNA chr18-2246 chr18 69932364 69932574 + 8.01 0.000 intron (NM_001303619, intron 1 of 4) intron (NM_001303619, intron 1 of 4) 15404 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr1-11875 chr1 41521446 41521656 + 8.01 0.000 intron (NM_024503, intron 6 of 8) MIR3|SINE|MIR -36868 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr1-10495 chr1 164929442 164929652 + 8.01 0.000 Intergenic Intergenic -154906 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr16-5026 chr16 53055725 53055935 + 8.01 0.000 intron (NM_025134, intron 1 of 38) intron (NM_025134, intron 1 of 38) 839 NM_025134 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr14-5180 chr14 92451290 92451500 + 8.01 0.000 intron (NM_153646, intron 10 of 16) intron (NM_153646, intron 10 of 16) -62386 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr12-7933 chr12 108874348 108874558 + 8.01 0.000 Intergenic AluJb|SINE|Alu -5639 NM_001917 1610 Hs.113227 NM_001917 ENSG00000110887 DAO DAAO|DAMOX|OXDA D-amino acid oxidase protein-coding chrX-4938 chrX 111095152 111095362 + 8.01 0.000 promoter-TSS (NR_136740) promoter-TSS (NR_136740) -934 NM_001324326 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr3-5681 chr3 13452750 13452960 + 8.01 0.000 Intergenic L1ME2|LINE|L1 27198 NR_046690 100874101 Hs.535701 NR_046690 ENSG00000244502 HDAC11-AS1 - HDAC11 antisense RNA 1 ncRNA chr4-6509 chr4 160622616 160622826 + 8.01 0.000 Intergenic L1M5|LINE|L1 -844937 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chrX-5092 chrX 127080380 127080590 + 8.01 0.000 Intergenic L2a|LINE|L2 260756 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr5-5061 chr5 93073132 93073342 + 8.01 0.000 Intergenic Intergenic 498106 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr6-5645 chr6 75378259 75378469 + 8.01 0.000 intron (NM_001300866, intron 2 of 6) Tigger17a|DNA|TcMar-Tigger -4822 NR_125859 101928540 Hs.526972 NR_125859 LOC101928540 - uncharacterized LOC101928540 ncRNA chr13-1932 chr13 82740589 82740799 + 8.01 0.000 Intergenic L1PA16|LINE|L1 1141699 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr9-8146 chr9 102725190 102725400 + 8.01 0.000 Intergenic L1PA16|LINE|L1 205658 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA chr21-1060 chr21 29686695 29686905 + 8.01 0.000 intron (NM_001320621, intron 1 of 13) intron (NM_001320621, intron 1 of 13) -61375 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA chr13-3861 chr13 51006303 51006513 + 8.01 0.000 intron (NR_003923, intron 15 of 16) intron (NR_003923, intron 15 of 16) 59749 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr22-2257 chr22 29742452 29742662 + 8.01 0.000 intron (NM_001318129, intron 2 of 5) intron (NM_001318129, intron 2 of 5) 22554 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr4-7232 chr4 43713863 43714073 + 8.01 0.000 Intergenic L1MC5|LINE|L1 -221425 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr11-2618 chr11 6740663 6740873 + 8.01 0.000 Intergenic AluSx1|SINE|Alu -18889 NR_003945 387751 Hs.494757 NR_003945 ENSG00000254838 GVINP1 GVIN1|GVIN1P|VLIG-1|VLIG1 GTPase, very large interferon inducible pseudogene 1 pseudo chr13-1836 chr13 84921712 84921922 + 8.01 0.000 Intergenic L1M5|LINE|L1 138163 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr12-7848 chr12 103630731 103630941 + 8.01 0.000 intron (NM_017564, intron 5 of 68) MLT1D|LTR|ERVL-MaLR 43563 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chr3-6744 chr3 139692189 139692399 + 8.01 0.000 Intergenic L2c|LINE|L2 -14244 NM_001320511 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr17-6449 chr17 13922960 13923170 + 8.01 0.000 Intergenic MER52-int|LTR|ERV1 -101433 NR_003261 94158 Hs.633073 NR_003261 CDRT15P1 CDRT15P CMT1A duplicated region transcript 15 pseudogene 1 pseudo chr17-8475 chr17 78054133 78054343 + 8.01 0.000 intron (NM_018996, intron 4 of 20) Tigger3c|DNA|TcMar-Tigger 50001 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chrX-1929 chrX 153954115 153954325 + 8.01 0.000 exon (NM_005334, exon 17 of 26) exon (NM_005334, exon 17 of 26) -9577 NM_002910 5973 Hs.158331 NM_002910 ENSG00000102032 RENBP RBP|RNBP renin binding protein protein-coding chr15-4879 chr15 75867942 75868152 + 8.01 0.000 intron (NM_001145335, intron 3 of 12) intron (NM_001145335, intron 3 of 12) 24003 NM_001145335 92912 Hs.23033 NM_173469 ENSG00000140367 UBE2Q2 - ubiquitin conjugating enzyme E2 Q2 protein-coding chr4-3435 chr4 83867327 83867537 + 8.01 0.000 Intergenic Intergenic 331324 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr8-3682 chr8 17312370 17312580 + 8.01 0.000 intron (NM_004686, intron 8 of 13) AluSx|SINE|Alu 65517 NM_001363171 137492 Hs.343873 NM_152415 ENSG00000155975 VPS37A HCRP1|PQBP2|SPG53 VPS37A subunit of ESCRT-I protein-coding chr13-2316 chr13 32471741 32471951 + 8.01 0.000 intron (NM_001320836, intron 6 of 9) LTR18B|LTR|ERVL 26646 NR_051980 100462953 Hs.687692 NR_051980 MICOS10P1 CG012|MINOS1P1|N4BP2L2-IT|N4BP2L2-IT1|N4BP2L2IT1 MICOS10 pseudogene 1 pseudo chr5-4988 chr5 80646400 80646610 + 8.01 0.000 intron (NM_000791, intron 3 of 5) L1MB7|LINE|L1 4503 NM_001190470 100462981 NM_001190470 MTRNR2L2 HN2 MT-RNR2 like 2 protein-coding chr8-2798 chr8 122818418 122818628 + 8.01 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 36868 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chrX-1661 chrX 149356645 149356855 + 8.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR 148556 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr11-9958 chr11 76850980 76851190 + 8.01 0.000 Intergenic MIR|SINE|MIR -9833 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr12-3663 chr12 120344605 120344815 + 8.01 0.000 intron (NM_002442, intron 14 of 14) AluJr|SINE|Alu -16931 NM_000928 5319 Hs.992 NM_000928 ENSG00000170890 PLA2G1B PLA2|PLA2A|PPLA2 phospholipase A2 group IB protein-coding chr2-8412 chr2 118013216 118013426 + 8.01 0.000 intron (NM_019044, intron 1 of 23) CpG 749 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr22-2929 chr22 47126732 47126942 + 8.01 0.000 intron (NM_001284305, intron 12 of 12) intron (NM_001284305, intron 12 of 12) -210795 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr9-7257 chr9 5191828 5192038 + 8.01 0.000 Intergenic MamGypLTR1a|LTR|Gypsy -6294 NM_007179 11172 Hs.632648 NM_007179 ENSG00000120210 INSL6 RIF1 insulin like 6 protein-coding chr5-2644 chr5 682886 683096 + 8.01 0.000 intron (NM_007030, intron 1 of 3) intron (NM_007030, intron 1 of 3) 10361 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr13-2011 chr13 36918322 36918532 + 8.01 0.000 intron (NM_001127217, intron 1 of 6) intron (NM_001127217, intron 1 of 6) 1811 NM_005905 4093 Hs.123119 NM_005905 ENSG00000120693 SMAD9 MADH6|MADH9|PPH2|SMAD8|SMAD8/9|SMAD8A|SMAD8B SMAD family member 9 protein-coding chr1-12156 chr1 178970061 178970271 + 8.01 0.000 Intergenic Intergenic -55638 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr8-4391 chr8 103913683 103913893 + 8.01 0.000 intron (NR_145711, intron 4 of 21) MSTA|LTR|ERVL-MaLR 94568 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr2-5300 chr2 70413248 70413458 + 8.01 0.000 Intergenic Intergenic 68287 NR_046798 100874273 Hs.682157 NR_046798 ENSG00000224606 TGFA-IT1 - TGFA intronic transcript 1 ncRNA chr2-13123 chr2 116092324 116092534 + 8.01 0.000 Intergenic L1MA4A|LINE|L1 748614 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr2-7957 chr2 62895562 62895772 + 8.01 0.000 intron (NM_001142615, intron 10 of 22) L2c|LINE|L2 152044 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr8-4962 chr8 122789649 122789859 + 8.01 0.000 intron (NM_001362797, intron 1 of 4) Tigger19b|DNA|TcMar-Tigger 8099 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr11-9425 chr11 59847388 59847598 + 8.01 0.000 Intergenic Intergenic -1994 NM_005142 2694 Hs.110014 NM_005142 ENSG00000134812 CBLIF GIF|IF|IFMH|INF|TCN3 cobalamin binding intrinsic factor protein-coding chr1-10606 chr1 177680994 177681204 + 8.01 0.000 Intergenic Intergenic -19425 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr13-4190 chr13 90201375 90201585 + 8.01 0.000 Intergenic L1MEf|LINE|L1 -29702 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr1-8597 chr1 183032020 183032230 + 8.01 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 8705 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr14-3895 chr14 97105768 97105978 + 8.01 0.000 Intergenic Intergenic -48984 NR_146554 105370648 NR_146554 ENSG00000259110 LINC02304 - long intergenic non-protein coding RNA 2304 ncRNA chr6-5391 chr6 152830126 152830336 + 8.01 0.000 Intergenic L1MC4|LINE|L1 79434 NM_194435 7432 Hs.53973 NM_003381 ENSG00000146469 VIP PHM27 vasoactive intestinal peptide protein-coding chr13-2556 chr13 65867289 65867499 + 8.01 0.000 intron (NR_132362, intron 1 of 2) L2a|LINE|L2 1347 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr10-4091 chr10 58513099 58513309 + 8.01 0.000 exon (NM_001080512, exon 1 of 21) exon (NM_001080512, exon 1 of 21) 332 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr16-5618 chr16 58488626 58488836 + 8.01 0.000 intron (NM_020465, intron 2 of 15) intron (NM_020465, intron 2 of 15) -11412 NR_040072 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr10-4359 chr10 33604247 33604457 + 8.01 0.000 Intergenic L1MA10|LINE|L1 168328 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr9-7843 chr9 84300279 84300489 + 8.01 0.000 intron (NM_022127, intron 6 of 18) intron (NM_022127, intron 6 of 18) 40374 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr1-8102 chr1 7716933 7717143 + 8.01 0.000 intron (NM_001349624, intron 1 of 11) L1MA8|LINE|L1 12302 NM_001349616 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr15-2880 chr15 42069506 42069716 + 8.01 0.000 intron (NM_178034, intron 19 of 19) intron (NM_178034, intron 19 of 19) -18908 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chr6-2481 chr6 72622246 72622456 + 8.01 0.000 exon (NM_001160133, exon 1 of 15) exon (NM_001160133, exon 1 of 15) 508 NM_001160134 56479 Hs.445324 NM_019842 ENSG00000185760 KCNQ5 Kv7.5|MRD46 potassium voltage-gated channel subfamily Q member 5 protein-coding chr2-8524 chr2 130150817 130151027 + 8.01 0.000 TTS (NM_001171083) TTS (NM_001171083) -5788 NM_207310 91409 Hs.29383 NM_207310 ENSG00000152076 CCDC74B - coiled-coil domain containing 74B protein-coding chr17-7745 chr17 34343976 34344186 + 8.01 0.000 Intergenic L1PB3|LINE|L1 -12399 NM_005408 6357 Hs.414629 NM_005408 ENSG00000181374 CCL13 CKb10|MCP-4|NCC-1|NCC1|SCYA13|SCYL1 C-C motif chemokine ligand 13 protein-coding chr2-4199 chr2 200509415 200509625 + 8.01 0.000 intron (NM_001321547, intron 1 of 6) intron (NM_001321547, intron 1 of 6) 548 NM_001321547 130535 Hs.605775 NM_152387 ENSG00000155729 KCTD18 6530404F10Rik potassium channel tetramerization domain containing 18 protein-coding chr9-7731 chr9 74205461 74205671 + 8.01 0.000 Intergenic Intergenic -165965 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr10-4394 chr10 50983244 50983454 + 8.01 0.000 Intergenic Intergenic -7539 NM_001098512 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr14-2684 chr14 76848316 76848526 + 8.01 0.000 intron (NM_194287, intron 7 of 13) AluJo|SINE|Alu 22013 NM_194287 145497 Hs.147276 NM_194287 ENSG00000100565 LRRC74A C14orf166B|LRRC74 leucine rich repeat containing 74A protein-coding chr2-12684 chr2 75876775 75876985 + 8.01 0.000 Intergenic HERV17-int|LTR|ERV1 -165965 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr4-2976 chr4 114875977 114876187 + 8.01 0.000 intron (NM_022569, intron 6 of 13) intron (NM_022569, intron 6 of 13) 219323 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chr13-1481 chr13 102399840 102400050 + 8.01 0.000 intron (NM_001321942, intron 1 of 5) intron (NM_001321942, intron 1 of 5) 1829 NM_175929 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr10-7053 chr10 84739565 84739775 + 8.01 0.000 Intergenic L1MCc|LINE|L1 314501 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr13-2048 chr13 50379548 50379758 + 8.01 0.000 intron (NR_109974, intron 2 of 6) MER77B|LTR|ERVL 147796 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr22-3797 chr22 29849748 29849958 + 8.01 0.000 Intergenic L2b|LINE|L2 -11579 NM_001369922 84164 Hs.731754 NM_032204 ENSG00000100325 ASCC2 ASC1p100|p100 activating signal cointegrator 1 complex subunit 2 protein-coding chrX-2226 chrX 43883951 43884161 + 8.01 0.000 Intergenic MSTD|LTR|ERVL-MaLR -1606 NM_000898 4129 Hs.654473 NM_000898 ENSG00000069535 MAOB - monoamine oxidase B protein-coding chr3-6028 chr3 49570906 49571116 + 8.01 0.000 intron (NM_003458, intron 1 of 11) intron (NM_003458, intron 1 of 11) 16534 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr3-9852 chr3 79572978 79573188 + 8.01 0.000 intron (NM_002941, intron 2 of 30) AluJo|SINE|Alu 65196 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA chr5-8584 chr5 137814120 137814330 + 8.01 0.000 Intergenic L1MA8|LINE|L1 13032 NR_002713 4888 Hs.643466 NR_002713 ENSG00000226306 NPY6R NPY1RL|NPY6RP|PP2|Y2B neuropeptide Y receptor Y6 (pseudogene) pseudo chr19-3129 chr19 17292137 17292347 + 8.01 0.000 3' UTR (NM_024527, exon 5 of 5) 3' UTR (NM_024527, exon 5 of 5) 10341 NR_103530 126549 Hs.721610 NM_152363 ENSG00000160117 ANKLE1 ANKRD41|LEM3|LEMD6 ankyrin repeat and LEM domain containing 1 protein-coding chr6-7721 chr6 89674976 89675186 + 8.01 0.000 intron (NM_014611, intron 78 of 101) intron (NM_014611, intron 78 of 101) -36334 NM_020466 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chr2-6612 chr2 237311479 237311689 + 8.01 0.000 Intergenic AluSx1|SINE|Alu 102580 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chrX-922 chrX 21626179 21626389 + 8.01 0.000 intron (NM_001168647, intron 19 of 20) L2c|LINE|L2 32046 NM_153270 257240 Hs.448572 NM_153270 ENSG00000185915 KLHL34 - kelch like family member 34 protein-coding chr16-6474 chr16 57779835 57780045 + 8.01 0.000 non-coding (NR_134678, exon 2 of 19) non-coding (NR_134678, exon 2 of 19) 2429 NR_134678 3801 Hs.23131 NM_005550 ENSG00000140859 KIFC3 - kinesin family member C3 protein-coding chr14-2370 chr14 34361825 34362035 + 8.01 0.000 Intergenic Intergenic 100310 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chrX-1710 chrX 19555128 19555338 + 8.01 0.000 intron (NM_001024666, intron 12 of 16) intron (NM_001024666, intron 12 of 16) -39972 NM_001001671 389840 Hs.713701 NM_001001671 ENSG00000180815 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding chr4-6423 chr4 130776990 130777200 + 8.01 0.000 Intergenic L1P3|LINE|L1 400734 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr1-15032 chr1 93615180 93615390 + 8.01 0.000 intron (NM_001261409, intron 3 of 11) intron (NM_001261409, intron 3 of 11) -1188 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr18-1893 chr18 29678284 29678494 + 8.01 0.000 Intergenic THE1A|LTR|ERVL-MaLR -620521 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr19-2648 chr19 6863576 6863786 + 8.01 0.000 Intergenic Intergenic -23898 NM_001974 2015 Hs.2375 NM_001974 ENSG00000174837 ADGRE1 EMR1|TM7LN3 adhesion G protein-coupled receptor E1 protein-coding chr12-5451 chr12 123290615 123290825 + 8.01 0.000 3' UTR (NM_001167856, exon 32 of 32) 3' UTR (NM_001167856, exon 32 of 32) -18480 NR_073007 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr5-6628 chr5 41789188 41789398 + 8.01 0.000 intron (NR_157114, intron 12 of 15) MER58A|DNA|hAT-Charlie 54364 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr2-10047 chr2 32925801 32926011 + 8.01 0.000 non-coding (NR_027098, exon 5 of 6) non-coding (NR_027098, exon 5 of 6) -1221 NR_027097 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr7-7466 chr7 92359931 92360141 + 8.01 0.000 intron (NM_019004, intron 9 of 19) intron (NM_019004, intron 9 of 19) 77278 NR_145992 105375396 NM_001317905 ENSG00000230927 TMBIM7P - transmembrane BAX inhibitor motif containing 7, pseudogene pseudo chr10-4100 chr10 67120012 67120222 + 8.01 0.000 intron (NM_001127384, intron 7 of 17) intron (NM_001127384, intron 7 of 17) 107851 NR_111909 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr10-7859 chr10 47221671 47221881 + 8.01 0.000 Intergenic Intergenic -78421 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr13-3769 chr13 43865960 43866170 + 8.01 0.000 intron (NM_001350617, intron 2 of 4) Tigger7|DNA|TcMar-Tigger -13113 NM_001128303 144811 Hs.210586 NM_153218 ENSG00000179630 LACC1 C13orf31|FAMIN laccase domain containing 1 protein-coding chr4-8202 chr4 134606084 134606294 + 8.01 0.000 Intergenic L1MEg|LINE|L1 182321 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr17-3324 chr17 67469274 67469484 + 8.01 0.000 intron (NM_181671, intron 1 of 9) MER5A1|DNA|hAT-Charlie -2110 NR_037517 100500895 NR_037517 ENSG00000207688 MIR548AA2 - microRNA 548aa-2 ncRNA chr12-3947 chr12 5916991 5917201 + 8.01 0.000 intron (NM_001278596, intron 3 of 25) intron (NM_001278596, intron 3 of 25) 28163 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr1-15351 chr1 147072604 147072814 + 8.01 0.000 Intergenic CpG 12047 NR_121645 101447996 NR_121645 ENSG00000286172 RNVU1-8 RNU1-145|vU1.8 RNA, variant U1 small nuclear 8 snRNA chr2-6639 chr2 1541206 1541416 + 8.01 0.000 intron (NM_175722, intron 14 of 14) L1MA7|LINE|L1 126903 NM_175722 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chr19-6379 chr19 12871405 12871615 + 8.01 0.000 intron (NM_014975, intron 24 of 25) AluSx4|SINE|Alu 9939 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr11-7023 chr11 118148864 118149074 + 8.01 0.000 intron (NM_174934, intron 1 of 4) intron (NM_174934, intron 1 of 4) -3536 NR_024527 6330 Hs.65239 NM_174934 ENSG00000177098 SCN4B ATFB17|LQT10|Navbeta4 sodium voltage-gated channel beta subunit 4 protein-coding chrX-5329 chrX 146264567 146264777 + 8.01 0.000 Intergenic Intergenic -236800 NR_030581 100126341 NR_030581 ENSG00000216056 MIR891A MIRN891A microRNA 891a ncRNA chr2-3491 chr2 200148555 200148765 + 8.01 0.000 Intergenic Intergenic -157219 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr5-5522 chr5 144088585 144088795 + 8.01 0.000 Intergenic Intergenic 81969 NM_001271732 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding chr7-6227 chr7 131764699 131764909 + 8.01 0.000 Intergenic Intergenic -145416 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr1-12709 chr1 53771739 53771949 + 8.01 0.000 intron (NR_033142, intron 16 of 16) intron (NR_033142, intron 16 of 16) -32680 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr4-7687 chr4 87657351 87657561 + 8.01 0.000 intron (NM_004407, intron 3 of 5) intron (NM_004407, intron 3 of 5) 7176 NM_004407 1758 Hs.652366 NM_004407 ENSG00000152592 DMP1 ARHP|ARHR|DMP-1 dentin matrix acidic phosphoprotein 1 protein-coding chr5-7249 chr5 11041726 11041936 + 8.01 0.000 intron (NM_001288715, intron 15 of 20) intron (NM_001288715, intron 15 of 20) -280597 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr18-1982 chr18 39793649 39793859 + 8.01 0.000 Intergenic Intergenic -41759 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 MIR924HG LINC00669 MIR924 host gene ncRNA chrX-1817 chrX 97680258 97680468 + 8.01 0.000 Intergenic L1MB5|LINE|L1 -115828 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr6-6472 chr6 110433501 110433711 + 8.01 0.000 intron (NM_033125, intron 6 of 7) intron (NM_033125, intron 6 of 7) -18031 NM_001368172 8528 Hs.591348 NM_003649 ENSG00000203797 DDO DASOX|DDO-1|DDO-2 D-aspartate oxidase protein-coding chr11-9296 chr11 45251529 45251739 + 8.01 0.000 intron (NM_020826, intron 4 of 5) intron (NM_020826, intron 4 of 5) 34707 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chrX-2863 chrX 142302308 142302518 + 8.01 0.000 Intergenic MSTB2-int|LTR|ERVL-MaLR -97123 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr8-7301 chr8 132308512 132308722 + 8.01 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 138645 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr2-14802 chr2 240858403 240858613 + 8.01 0.000 Intergenic MER84|LTR|ERV1 -10316 NM_000030 189 Hs.144567 NM_000030 ENSG00000172482 AGXT AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6 alanine--glyoxylate and serine--pyruvate aminotransferase protein-coding chr10-3768 chr10 124403501 124403711 + 8.01 0.000 intron (NM_001322969, intron 7 of 10) intron (NM_001322969, intron 7 of 10) 15317 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr10-5008 chr10 32844664 32844874 + 8.01 0.000 intron (NM_001321115, intron 34 of 43) intron (NM_001321115, intron 34 of 43) 56703 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr13-2544 chr13 63900460 63900670 + 8.01 0.000 Intergenic Intergenic -56440 NR_130763 102723968 Hs.551671 NR_130763 ENSG00000219926 LOC102723968 - uncharacterized LOC102723968 ncRNA chr3-3381 chr3 49647822 49648032 + 8.01 0.000 intron (NM_003458, intron 3 of 11) intron (NM_003458, intron 3 of 11) -26424 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr1-13038 chr1 168734384 168734594 + 8.01 0.000 Intergenic Intergenic -5283 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr17-7068 chr17 65183666 65183876 + 8.01 0.000 intron (NM_003835, intron 9 of 18) intron (NM_003835, intron 9 of 18) 46401 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr13-3035 chr13 26695171 26695381 + 8.01 0.000 Intergenic Intergenic 65510 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr16-1835 chr16 60245871 60246081 + 8.01 0.000 Intergenic Intergenic 113817 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr21-979 chr21 9013320 9013530 + 8.01 0.000 Intergenic MER4CL34|LTR|ERV1 25808 NR_162105 113218501 NR_162105 MIR10396A - microRNA 10396a ncRNA chr16-6495 chr16 58719084 58719294 + 8.01 0.000 intron (NM_001286220, intron 3 of 8) intron (NM_001286220, intron 3 of 8) 15127 NM_002080 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr13-3233 chr13 28655414 28655624 + 8.01 0.000 Intergenic Intergenic -3611 NM_015932 51371 Hs.268742 NM_015932 ENSG00000132963 POMP C13orf12|HSPC014|PNAS-110|PRAAS2|UMP1 proteasome maturation protein protein-coding chr11-8178 chr11 62937010 62937220 + 8.01 0.000 Intergenic Intergenic -15752 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr1-8919 chr1 7002099 7002309 + 8.01 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 216750 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr16-6091 chr16 12088181 12088391 + 8.01 0.000 intron (NM_032167, intron 11 of 20) intron (NM_032167, intron 11 of 20) 111552 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr11-6235 chr11 47998924 47999134 + 8.01 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) 18470 NM_001098503 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr3-9794 chr3 72778101 72778311 + 8.01 0.000 intron (NM_018130, intron 10 of 10) AluJo|SINE|Alu 70239 NM_018130 55164 Hs.606584 NM_018130 ENSG00000144736 SHQ1 GRIM-1|Shq1p SHQ1, H/ACA ribonucleoprotein assembly factor protein-coding chr19-5252 chr19 47080503 47080713 + 8.01 0.000 intron (NM_015168, intron 11 of 14) AluJb|SINE|Alu -31984 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chr1-5759 chr1 119833938 119834148 + 8.01 0.000 TTS (NM_001047980) TTS (NM_001047980) 10837 NM_001047980 343505 NM_001047980 NBPF7 - NBPF member 7 protein-coding chr1-8389 chr1 76374685 76374895 + 8.01 0.000 intron (NM_001349111, intron 3 of 5) intron (NM_001349111, intron 3 of 5) 300044 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr1-10416 chr1 157618787 157618997 + 8.01 0.000 Intergenic Intergenic -20807 NM_031282 83417 Hs.120260 NM_031282 ENSG00000163518 FCRL4 CD307d|FCRH4|IGFP2|IRTA1 Fc receptor like 4 protein-coding chr4-7372 chr4 60381783 60381993 + 8.01 0.000 Intergenic Intergenic -540731 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr1-13230 chr1 215696538 215696748 + 8.01 0.000 intron (NM_206933, intron 61 of 71) intron (NM_206933, intron 61 of 71) 129339 NM_001319294 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr21-596 chr21 45800376 45800586 + 8.01 0.000 intron (NM_001348243, intron 3 of 15) intron (NM_001348243, intron 3 of 15) 35938 NR_038876 100129027 Hs.689591 NR_038876 ENSG00000205424 LOC100129027 - uncharacterized LOC100129027 ncRNA chr12-4931 chr12 68856807 68857017 + 8.01 0.000 intron (NM_001874, intron 8 of 8) intron (NM_001874, intron 8 of 8) 47888 NM_001145337 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding chr4-5172 chr4 157497971 157498181 + 8.01 0.000 Intergenic L1MC3|LINE|L1 -74414 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr20-2636 chr20 42928378 42928588 + 8.01 0.000 intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) -40260 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA chrX-3822 chrX 148436720 148436930 + 8.01 0.000 Intergenic MIR|SINE|MIR -63792 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr4-3891 chr4 144659001 144659211 + 8.01 0.000 intron (NM_022475, intron 3 of 12) intron (NM_022475, intron 3 of 12) 12950 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr7-3504 chr7 5275636 5275846 + 8.01 0.000 Intergenic MIR3|SINE|MIR -7202 NM_153247 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr9-5631 chr9 120009179 120009389 + 8.01 0.000 Intergenic Intergenic 74224 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr4-7736 chr4 91663761 91663971 + 8.01 0.000 Intergenic L1PB4|LINE|L1 613436 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr17-4784 chr17 46977025 46977235 + 8.01 0.000 Intergenic Intergenic 2123 NM_203400 388394 Hs.367999 NM_203400 ENSG00000179673 RPRML - reprimo like protein-coding chr2-10030 chr2 27282518 27282728 + 8.01 0.000 5' UTR (NM_032546, exon 1 of 10) 5' UTR (NM_032546, exon 1 of 10) 194 NM_187841 57159 Hs.516036 NM_032546 ENSG00000138100 TRIM54 MURF|MURF-3|RNF30|muRF3 tripartite motif containing 54 protein-coding chr4-2714 chr4 3658279 3658489 + 8.01 0.000 Intergenic Intergenic 19471 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr2-11549 chr2 241136678 241136888 + 8.01 0.000 intron (NM_015148, intron 7 of 17) intron (NM_015148, intron 7 of 17) 12689 NM_015148 23178 Hs.397891 NM_015148 ENSG00000115687 PASK PASKIN|STK37 PAS domain containing serine/threonine kinase protein-coding chr1-12747 chr1 64706734 64706944 + 8.01 0.000 Intergenic AluSz6|SINE|Alu -38134 NM_001366165 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr16-3393 chr16 69610853 69611063 + 8.01 0.000 intron (NM_138714, intron 2 of 15) L2a|LINE|L2 44992 NM_173214 10725 Hs.371987 NM_006599 ENSG00000102908 NFAT5 NF-AT5|NFATL1|NFATZ|OREBP|TONEBP nuclear factor of activated T cells 5 protein-coding chr1-14079 chr1 29739562 29739772 + 8.01 0.000 Intergenic Intergenic 297945 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr9-7492 chr9 30679480 30679690 + 8.01 0.000 Intergenic Intergenic -271131 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr9-7337 chr9 14523160 14523370 + 8.01 0.000 intron (NM_001369458, intron 1 of 11) intron (NM_001369458, intron 1 of 11) 8812 NM_001369458 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr2-12532 chr2 66002850 66003060 + 8.01 0.000 Intergenic MLT2B2|LTR|ERVL 355373 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr7-9206 chr7 116710846 116711056 + 8.01 0.000 intron (NM_000245, intron 2 of 20) intron (NM_000245, intron 2 of 20) 38755 NM_001324401 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr10-8672 chr10 100780142 100780352 + 8.01 0.000 intron (NM_003988, intron 4 of 10) intron (NM_003988, intron 4 of 10) 34536 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr2-7894 chr2 54941578 54941788 + 8.01 0.000 intron (NM_001039753, intron 27 of 40) intron (NM_001039753, intron 27 of 40) 68589 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr15-2990 chr15 53660837 53661047 + 8.01 0.000 intron (NM_182758, intron 14 of 19) intron (NM_182758, intron 14 of 19) 98721 NM_182758 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr5-1830 chr5 96721363 96721573 + 8.01 0.000 intron (NM_001042446, intron 1 of 26) intron (NM_001042446, intron 1 of 26) 18808 NM_001330633 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr1-7953 chr1 182653638 182653848 + 8.01 0.000 intron (NM_001102450, intron 5 of 6) L2c|LINE|L2 18181 NM_001369564 85397 Hs.20982 NM_033345 ENSG00000135824 RGS8 - regulator of G protein signaling 8 protein-coding chr12-4027 chr12 42144019 42144229 + 8.01 0.000 intron (NM_173601, intron 1 of 7) intron (NM_173601, intron 1 of 7) 750 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr3-8976 chr3 16469309 16469519 + 8.01 0.000 intron (NM_015150, intron 2 of 9) intron (NM_015150, intron 2 of 9) 44285 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr11-3380 chr11 127890261 127890471 + 8.01 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -318400 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr1-10362 chr1 154898189 154898399 + 8.01 0.000 Intergenic L2a|LINE|L2 -28013 NM_002249 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr13-1232 chr13 85236505 85236715 + 8.01 0.000 Intergenic MLT2B4|LTR|ERVL -88553 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr4-5740 chr4 55090722 55090932 + 8.01 0.000 intron (NM_002253, intron 22 of 29) intron (NM_002253, intron 22 of 29) 34768 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr22-2019 chr22 36938085 36938295 + 8.01 0.000 exon (NM_000395, exon 14 of 14) exon (NM_000395, exon 14 of 14) 24562 NM_000395 1439 Hs.592192 NM_000395 ENSG00000100368 CSF2RB CD131|CDw131|IL3RB|IL5RB|SMDP5|betaGMR colony stimulating factor 2 receptor beta common subunit protein-coding chr20-2238 chr20 259080 259290 + 8.01 0.000 exon (NM_207469, exon 2 of 2) exon (NM_207469, exon 2 of 2) 1461 NM_207469 400830 Hs.516819 NM_207469 ENSG00000186458 DEFB132 BD-32|DEFB-32|DEFB32|HEL-75|KFLL827|UNQ827 defensin beta 132 protein-coding chr15-2556 chr15 50463860 50464070 + 8.01 0.000 intron (NM_001128610, intron 6 of 19) intron (NM_001128610, intron 6 of 19) 39560 NM_005154 9101 Hs.443731 NM_005154 ENSG00000138592 USP8 HumORF8|PITA4|SPG59|UBPY ubiquitin specific peptidase 8 protein-coding chr10-9045 chr10 124196361 124196571 + 8.01 0.000 Intergenic L2b|LINE|L2 -102868 NM_001270764 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr19-6296 chr19 8398152 8398362 + 8.01 0.000 intron (NM_004218, intron 1 of 4) intron (NM_004218, intron 1 of 4) -7566 NR_038237 100507567 Hs.637720 NR_038237 ENSG00000269386 RAB11B-AS1 MIR4999HG RAB11B antisense RNA 1 ncRNA chr13-3335 chr13 68981188 68981398 + 8.01 0.000 Intergenic L1MD3|LINE|L1 -95968 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr2-6378 chr2 110852906 110853116 + 8.01 0.000 intron (NM_001371254, intron 10 of 18) intron (NM_001371254, intron 10 of 18) 120438 NM_001371254 chr11-6006 chr11 22356050 22356260 + 8.01 0.000 intron (NM_020346, intron 3 of 11) MIR|SINE|MIR 17774 NM_020346 57084 Hs.242821 NM_020346 ENSG00000091664 SLC17A6 DNPI|VGLUT2 solute carrier family 17 member 6 protein-coding chr5-5137 chr5 104321825 104322035 + 8.01 0.000 Intergenic Intergenic -759141 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr14-5173 chr14 92171059 92171269 + 8.01 0.000 3' UTR (NM_017437, exon 16 of 16) 3' UTR (NM_017437, exon 16 of 16) 49195 NM_001322270 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr3-8121 chr3 21195589 21195799 + 8.01 0.000 Intergenic Intergenic -210032 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr12-7992 chr12 111562184 111562394 + 8.01 0.000 intron (NM_001310121, intron 1 of 25) AluJr|SINE|Alu 37026 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr11-4864 chr11 33904330 33904540 + 8.01 0.000 Intergenic Intergenic -12359 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr11-4017 chr11 7773227 7773437 + 8.01 0.000 Intergenic Intergenic 23610 NM_153444 120065 Hs.351824 NM_153444 ENSG00000183303 OR5P2 JCG3|JCG4 olfactory receptor family 5 subfamily P member 2 protein-coding chr18-3208 chr18 46476649 46476859 + 8.01 0.000 TTS (NM_001173129) TTS (NM_001173129) 42332 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr17-6209 chr17 6977761 6977971 + 8.01 0.000 Intergenic AluJo|SINE|Alu -18183 NM_000697 239 Hs.654431 NM_000697 ENSG00000108839 ALOX12 12-LOX|12S-LOX|LOG12 arachidonate 12-lipoxygenase, 12S type protein-coding chr11-10306 chr11 107735505 107735715 + 8.01 0.000 Intergenic L1PA16|LINE|L1 -23554 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr18-2453 chr18 35071797 35072007 + 8.01 0.000 intron (NM_001143827, intron 3 of 7) intron (NM_001143827, intron 3 of 7) 30489 NR_046177 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr7-8543 chr7 55844375 55844585 + 8.01 0.000 intron (NM_207366, intron 4 of 9) intron (NM_207366, intron 4 of 9) 18272 NM_207366 346288 Hs.453629 NM_207366 ENSG00000154997 SEPTIN14 SEPT14 septin 14 protein-coding chr13-2056 chr13 51679715 51679925 + 8.01 0.000 intron (NM_052950, intron 3 of 11) MLT1C|LTR|ERVL-MaLR 95358 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr18-2505 chr18 60668137 60668347 + 8.01 0.000 Intergenic Intergenic -295467 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr20-1807 chr20 62484287 62484497 + 8.01 0.000 Intergenic Intergenic -8397 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr6-7767 chr6 95344342 95344552 + 8.01 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 233004 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr3-9098 chr3 28326843 28327053 + 8.01 0.000 exon (NM_001271650, exon 8 of 9) exon (NM_001271650, exon 8 of 9) -21773 NM_001040432 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding chrX-4788 chrX 98267276 98267486 + 8.01 0.000 Intergenic L1MA4A|LINE|L1 -702846 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr10-8918 chr10 115512793 115513003 + 8.01 0.000 intron (NM_207303, intron 24 of 28) intron (NM_207303, intron 24 of 28) 419533 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr16-5039 chr16 58603386 58603596 + 8.01 0.000 intron (NM_206999, intron 1 of 30) L2a|LINE|L2 26335 NR_049763 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr7-4493 chr7 149821280 149821490 + 8.01 0.000 intron (NR_163594, intron 82 of 102) intron (NR_163594, intron 82 of 102) -16990 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding chr22-3700 chr22 24729080 24729290 + 8.01 0.000 intron (NM_001008496, intron 14 of 20) MER61F|LTR|ERV1 -35316 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo chr2-10359 chr2 168248134 168248344 + 8.01 0.000 promoter-TSS (NM_013233) promoter-TSS (NM_013233) -644 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr4-7228 chr4 43594297 43594507 + 8.01 0.000 Intergenic Intergenic -101859 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr3-10942 chr3 175712934 175713144 + 8.01 0.000 intron (NM_207015, intron 11 of 13) intron (NM_207015, intron 11 of 13) 63294 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr1-10548 chr1 171730411 171730621 + 8.01 0.000 intron (NM_001185127, intron 2 of 7) L1MEj|LINE|L1 11549 NM_001185127 8674 Hs.6651 NM_003762 ENSG00000117533 VAMP4 VAMP-4|VAMP24 vesicle associated membrane protein 4 protein-coding chr1-9790 chr1 57222291 57222501 + 8.01 0.000 intron (NM_001353980, intron 5 of 5) intron (NM_001353980, intron 5 of 5) 200716 NM_001365793 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr22-2935 chr22 47380751 47380961 + 8.01 0.000 Intergenic Intergenic 35285 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr9-2838 chr9 127199143 127199353 + 8.01 0.000 intron (NM_014636, intron 14 of 18) intron (NM_014636, intron 14 of 18) -64414 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr4-5011 chr4 138978665 138978875 + 8.01 0.000 intron (NR_133945, intron 2 of 2) MER41C|LTR|ERV1 33876 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr1-15761 chr1 173356114 173356324 + 8.01 0.000 intron (NR_037845, intron 2 of 2) intron (NR_037845, intron 2 of 2) 105143 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr5-1808 chr5 73565217 73565427 + 8.01 0.000 promoter-TSS (NM_032175) promoter-TSS (NM_032175) 317 NM_023039 57763 Hs.239154 NM_023039 ENSG00000164331 ANKRA2 ANKRA ankyrin repeat family A member 2 protein-coding chr5-6440 chr5 161004784 161004994 + 8.01 0.000 Intergenic L1M2|LINE|L1 -66263 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr2-6281 chr2 54980637 54980847 + 8.01 0.000 intron (NM_020532, intron 5 of 8) intron (NM_020532, intron 5 of 8) 29530 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chrX-5231 chrX 136509782 136509992 + 8.01 0.000 intron (NM_014500, intron 7 of 8) intron (NM_014500, intron 7 of 8) 12295 NM_014500 27336 Hs.204475 NM_014500 ENSG00000102241 HTATSF1 TAT-SF1|TATSF1|dJ196E23.2 HIV-1 Tat specific factor 1 protein-coding chr4-4387 chr4 41178443 41178653 + 8.01 0.000 intron (NM_173075, intron 1 of 16) L2a|LINE|L2 35994 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr6-8534 chr6 160462166 160462376 + 8.01 0.000 Intergenic Intergenic 48853 NR_028093 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr3-4559 chr3 146153055 146153265 + 8.01 0.000 intron (NM_182943, intron 1 of 19) intron (NM_182943, intron 1 of 19) 8024 NM_182943 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr1-15829 chr1 179451811 179452021 + 8.01 0.000 intron (NM_144696, intron 16 of 25) THE1B-int|LTR|ERVL-MaLR 85872 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr19-4587 chr19 11612141 11612351 + 8.01 0.000 intron (NM_001290083, intron 2 of 4) AluY|SINE|Alu 14763 NM_001290085 199692 Hs.526665 NM_145295 ENSG00000198551 ZNF627 - zinc finger protein 627 protein-coding chr2-8135 chr2 81198142 81198352 + 8.01 0.000 Intergenic Intergenic 268699 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr12-3316 chr12 81284105 81284315 + 8.01 0.000 intron (NM_001220475, intron 23 of 30) intron (NM_001220475, intron 23 of 30) 5021 NR_120491 102724663 Hs.667264 NR_120491 ENSG00000257467 PPFIA2-AS1 - PPFIA2 antisense RNA 1 ncRNA chr16-6799 chr16 79266066 79266276 + 8.01 0.000 Intergenic FLAM_C|SINE|Alu 334566 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr21-866 chr21 37868716 37868926 + 8.01 0.000 intron (NM_002240, intron 1 of 3) intron (NM_002240, intron 1 of 3) 47636 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr6-3757 chr6 13399858 13400068 + 8.01 0.000 intron (NM_018988, intron 1 of 1) intron (NM_018988, intron 1 of 1) 8174 NM_001242630 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr1-15506 chr1 156175635 156175845 + 8.01 0.000 intron (NM_001370567, intron 13 of 13) intron (NM_001370567, intron 13 of 13) -18192 NR_104412 9673 Hs.532375 NM_014655 ENSG00000160785 SLC25A44 - solute carrier family 25 member 44 protein-coding chr2-6356 chr2 99881964 99882174 + 8.01 0.000 intron (NM_001025108, intron 6 of 23) (TC)n|Simple_repeat|Simple_repeat 223514 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr9-6571 chr9 123153015 123153225 + 8.01 0.000 intron (NR_033234, intron 11 of 18) L2a|LINE|L2 -37643 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chrX-1887 chrX 131572548 131572758 + 8.01 0.000 Intergenic L1MB7|LINE|L1 28579 NM_001004486 347468 Hs.553711 NM_001004486 ENSG00000171054 OR13H1 ORX1 olfactory receptor family 13 subfamily H member 1 protein-coding chr3-6799 chr3 144522783 144522993 + 8.01 0.000 Intergenic L2a|LINE|L2 549807 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr15-2353 chr15 38041956 38042166 + 8.01 0.000 intron (NR_120330, intron 1 of 3) intron (NR_120330, intron 1 of 3) 1668 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LINC02345 - long intergenic non-protein coding RNA 2345 ncRNA chr2-13612 chr2 159028342 159028552 + 8.01 0.000 intron (NM_001350063, intron 2 of 24) intron (NM_001350063, intron 2 of 24) 59807 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr8-5514 chr8 61668303 61668513 + 8.01 0.000 intron (NM_020164, intron 4 of 5) intron (NM_020164, intron 4 of 5) 21403 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr6-5275 chr6 138711249 138711459 + 8.01 0.000 Intergenic L1PA6|LINE|L1 19686 NR_033896 441172 Hs.92290 NR_033896 FLJ46906 - uncharacterized LOC441172 ncRNA chr7-3204 chr7 128724304 128724514 + 8.01 0.000 intron (NM_001282789, intron 5 of 7) intron (NM_001282789, intron 5 of 7) 9018 NM_001282788 84691 Hs.732440 NM_032599 ENSG00000135248 FAM71F1 FAM137A|NYD-SP18 family with sequence similarity 71 member F1 protein-coding chr10-5225 chr10 63866748 63866958 + 8.01 0.000 Intergenic Intergenic -344963 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr1-16320 chr1 217048895 217049105 + 8.01 0.000 intron (NM_001243509, intron 1 of 8) L2a|LINE|L2 27992 NM_001243509 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr4-7435 chr4 67256657 67256867 + 8.01 0.000 Intergenic MER66C|LTR|ERV1 165238 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr3-3052 chr3 126216715 126216925 + 8.01 0.000 Intergenic Intergenic -35634 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr2-6884 chr2 85410520 85410730 + 8.01 0.000 promoter-TSS (NM_001256140) promoter-TSS (NM_001256140) 72 NM_001320734 822 Hs.516155 NM_001747 ENSG00000042493 CAPG AFCP|HEL-S-66|MCP capping actin protein, gelsolin like protein-coding chr12-5224 chr12 107385642 107385852 + 8.01 0.000 intron (NM_001347944, intron 1 of 14) intron (NM_001347944, intron 1 of 14) 65159 NM_001347944 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr17-7012 chr17 54207302 54207512 + 8.01 0.000 Intergenic L1PA14|LINE|L1 384480 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr19-3377 chr19 12784489 12784699 + 8.01 0.000 Intergenic Intergenic -2534 NR_049864 100847071 NR_049864 ENSG00000263800 MIR5684 - microRNA 5684 ncRNA chr6-8593 chr6 166708980 166709190 + 8.01 0.000 intron (NM_001006932, intron 2 of 21) MIRc|SINE|MIR -81834 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr11-7558 chr11 18958913 18959123 + 8.01 0.000 Intergenic MIRc|SINE|MIR -24016 NM_147199 259249 Hs.711459 NM_147199 ENSG00000170255 MRGPRX1 GPCR|MGRG2|MRGX1|SNSR4 MAS related GPR family member X1 protein-coding chr19-4527 chr19 8148858 8149068 + 8.01 0.000 promoter-TSS (NM_001321431) promoter-TSS (NM_001321431) -94 NM_001321431 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr18-2959 chr18 22138577 22138787 + 8.01 0.000 Intergenic Intergenic 30286 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA chr11-3810 chr11 66365775 66365985 + 8.01 0.000 intron (NM_001532, intron 10 of 11) intron (NM_001532, intron 10 of 11) 5880 NM_001532 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr16-5519 chr16 23211483 23211693 + 8.01 0.000 intron (NM_001039, intron 7 of 12) AluSz|SINE|Alu 28843 NM_001039 6340 Hs.371727 NM_001039 ENSG00000166828 SCNN1G BESC3|ENaCg|ENaCgamma|LDLS2|PHA1|SCNEG sodium channel epithelial 1 gamma subunit protein-coding chrX-1532 chrX 30918515 30918725 + 8.01 0.000 Intergenic Intergenic -29366 NM_152787 257397 Hs.188256 NM_152787 ENSG00000157625 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 protein-coding chr3-6347 chr3 82640595 82640805 + 8.01 0.000 Intergenic MER52C|LTR|ERV1 654558 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr10-5349 chr10 72070295 72070505 + 8.01 0.000 exon (NM_001244950, exon 5 of 11) exon (NM_001244950, exon 5 of 11) 18151 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr3-4110 chr3 111417275 111417485 + 8.01 0.000 Intergenic Intergenic -124817 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chrX-5377 chrX 150554736 150554946 + 8.01 0.000 Intergenic L1MA8|LINE|L1 -13756 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr5-8068 chr5 94421253 94421463 + 8.01 0.000 intron (NM_001145678, intron 14 of 20) intron (NM_001145678, intron 14 of 20) 197246 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr15-2329 chr15 92694031 92694241 + 8.01 0.000 Intergenic Intergenic -38361 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr18-719 chr18 28284390 28284600 + 8.01 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -107365 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr11-5643 chr11 122570872 122571082 + 8.01 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -84745 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr2-8777 chr2 165424471 165424681 + 8.01 0.000 Intergenic Intergenic -45122 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr15-5183 chr15 93192524 93192734 + 8.01 0.000 Intergenic AluY|SINE|Alu -13437 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr12-8178 chr12 122173033 122173243 + 8.01 0.000 intron (NM_001014336, intron 2 of 2) intron (NM_001014336, intron 2 of 2) 1083 NM_001014336 386653 Hs.569071 NM_001014336 ENSG00000204671 IL31 IL-31 interleukin 31 protein-coding chr14-2773 chr14 19374628 19374838 + 8.01 0.000 Intergenic Intergenic -37059 NR_110526 503639 Hs.659013 NM_001013701 DUXAP10 - double homeobox A pseudogene 10 pseudo chr6-4981 chr6 107362093 107362303 + 8.01 0.000 intron (NM_020381, intron 1 of 7) L1M4a2|LINE|L1 97366 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr3-5287 chr3 123284558 123284768 + 8.01 0.000 exon (NM_001199642, exon 21 of 21) exon (NM_001199642, exon 21 of 21) 82720 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr7-3552 chr7 14126045 14126255 + 8.01 0.000 Intergenic Intergenic -134725 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr4-7453 chr4 69242971 69243181 + 8.01 0.000 Intergenic Intergenic -28328 NM_001073 10720 Hs.339811 NM_001073 ENSG00000213759 UGT2B11 - UDP glucuronosyltransferase family 2 member B11 protein-coding chr6-8367 chr6 149146113 149146323 + 8.01 0.000 Intergenic L1PA7|LINE|L1 -71706 NR_125861 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr8-5727 chr8 134223920 134224130 + 8.01 0.000 Intergenic Intergenic 337529 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr13-3164 chr13 103925286 103925496 + 8.01 0.000 Intergenic Intergenic 500191 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr14-4778 chr14 64400997 64401207 + 8.01 0.000 intron (NM_005956, intron 2 of 27) intron (NM_005956, intron 2 of 27) 12749 NM_005956 4522 Hs.652308 NM_005956 ENSG00000100714 MTHFD1 CIMAH|MTHFC|MTHFD methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 protein-coding chr8-5359 chr8 20198513 20198723 + 8.01 0.000 intron (NM_001693, intron 1 of 13) intron (NM_001693, intron 1 of 13) 1237 NM_001693 526 Hs.295917 NM_001693 ENSG00000147416 ATP6V1B2 ATP6B1B2|ATP6B2|DOOD|HO57|VATB|VPP3|Vma2|ZLS2 ATPase H+ transporting V1 subunit B2 protein-coding chr7-7629 chr7 135653258 135653468 + 8.01 0.000 Intergenic Intergenic -9151 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr3-3808 chr3 16033947 16034157 + 8.01 0.000 Intergenic Kanga1b|DNA|TcMar-Tc2 -140628 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr4-4622 chr4 79347412 79347622 + 8.01 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -21456 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr3-8348 chr3 76254639 76254849 + 8.01 0.000 Intergenic L1MD2|LINE|L1 -469195 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr11-3998 chr11 3624493 3624703 + 8.01 0.000 Intergenic L2c|LINE|L2 -1862 NR_002720 7221 Hs.131910 NR_002720 ENSG00000182048 TRPC2 - transient receptor potential cation channel subfamily C member 2 (pseudogene) pseudo chr22-4217 chr22 46375073 46375283 + 8.01 0.000 intron (NM_014246, intron 24 of 34) intron (NM_014246, intron 24 of 34) 39464 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr7-7358 chr7 55487089 55487299 + 8.01 0.000 intron (NM_001321243, intron 4 of 5) intron (NM_001321243, intron 4 of 5) 39686 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr2-8909 chr2 180948476 180948686 + 8.01 0.000 Intergenic Intergenic -31804 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr8-6497 chr8 64687989 64688199 + 8.01 0.000 intron (NM_004820, intron 1 of 5) intron (NM_004820, intron 1 of 5) -106202 NR_152770 401463 Hs.651960 NR_015374 ENSG00000254102 LOC401463 - uncharacterized LOC401463 ncRNA chr5-6041 chr5 171840159 171840369 + 8.01 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 54392 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr14-4607 chr14 52131844 52132054 + 8.01 0.000 Intergenic Intergenic -62890 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr20-1986 chr20 46309781 46309991 + 8.01 0.000 Intergenic Intergenic -1388 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr14-4635 chr14 54178327 54178537 + 8.01 0.000 Intergenic Intergenic -218436 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr4-7047 chr4 28249955 28250165 + 8.01 0.000 Intergenic Intergenic -569522 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr12-2343 chr12 5333299 5333509 + 8.01 0.000 Intergenic Intergenic -90253 NR_120477 101929584 Hs.436529 NR_120476 ENSG00000256115 LINC02443 - long intergenic non-protein coding RNA 2443 ncRNA chr6-4841 chr6 85419167 85419377 + 8.01 0.000 Intergenic Intergenic -14470 NR_134633 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr13-3171 chr13 108386676 108386886 + 8.01 0.000 Intergenic MER117|DNA|hAT-Charlie 117152 NM_001145645 10673 Hs.525157 NM_006573 ENSG00000102524 TNFSF13B BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4 TNF superfamily member 13b protein-coding chr7-5329 chr7 27200825 27201035 + 8.01 0.000 promoter-TSS (NM_000522) promoter-TSS (NM_000522) 509 NR_037843 100316868 Hs.199486 NR_037843 HOTTIP HOXA-AS6|HOXA13-AS1|NCRNA00213 HOXA distal transcript antisense RNA ncRNA chr20-4121 chr20 42154325 42154535 + 8.01 0.000 intron (NM_133170, intron 18 of 31) intron (NM_133170, intron 18 of 31) -531053 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr10-8314 chr10 78415301 78415511 + 8.01 0.000 Intergenic Intergenic 148064 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr18-2496 chr18 54496627 54496837 + 8.01 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -91027 NM_001307955 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr7-5036 chr7 1308655 1308865 + 8.01 0.000 Intergenic MIRb|SINE|MIR 75888 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr10-5325 chr10 71173955 71174165 + 8.01 0.000 Intergenic L1MCa|LINE|L1 -38510 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chrX-3742 chrX 123489571 123489781 + 8.01 0.000 3' UTR (NM_000828, exon 16 of 16) 3' UTR (NM_000828, exon 16 of 16) 243376 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr6-8304 chr6 143959821 143960031 + 8.01 0.000 intron (NM_001289047, intron 2 of 3) intron (NM_001289047, intron 2 of 3) 1484 NM_001317157 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr13-3548 chr13 24350954 24351164 + 8.01 0.000 Intergenic ERVL-B4-int|LTR|ERVL 19609 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr13-4412 chr13 110296005 110296215 + 8.01 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 11047 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr4-4835 chr4 109121831 109122041 + 8.01 0.000 intron (NM_198721, intron 3 of 36) L1MC1|LINE|L1 180722 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr1-3319 chr1 16359935 16360145 + 8.01 0.000 Intergenic AluSg|SINE|Alu -7202 NR_073500 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr7-6492 chr7 7389475 7389685 + 8.01 0.000 intron (NM_001037763, intron 27 of 34) L1PA7|LINE|L1 134426 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr17-4809 chr17 50664960 50665170 + 8.01 0.000 intron (NM_003786, intron 10 of 30) intron (NM_003786, intron 10 of 30) 30184 NM_001144070 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr3-10310 chr3 126528389 126528599 + 8.01 0.000 intron (NR_130715, intron 5 of 5) intron (NR_130715, intron 5 of 5) 4339 NM_152889 166012 Hs.292375 NM_152889 ENSG00000180767 CHST13 C4ST3 carbohydrate sulfotransferase 13 protein-coding chr3-5948 chr3 45465422 45465632 + 8.01 0.000 intron (NM_001368263, intron 7 of 20) intron (NM_001368263, intron 7 of 20) 44018 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr16-3126 chr16 70805766 70805976 + 8.01 0.000 3' UTR (NM_001270974, exon 86 of 86) 3' UTR (NM_001270974, exon 86 of 86) -4713 NM_018052 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|TAX1BP2|TRX VAC14 component of PIKFYVE complex protein-coding chrX-4753 chrX 94829279 94829489 + 8.01 0.000 Intergenic MER21B|LTR|ERVL 233842 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr4-8678 chr4 180335249 180335459 + 8.01 0.000 Intergenic Intergenic 823795 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr1-9256 chr1 24622291 24622501 + 8.01 0.000 Intergenic L2a|LINE|L2 -20906 NM_001366588 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr15-3422 chr15 90035043 90035253 + 8.01 0.000 intron (NM_198526, intron 1 of 4) intron (NM_198526, intron 1 of 4) 28393 NR_036135 100422841 NR_036135 ENSG00000265871 MIR3174 - microRNA 3174 ncRNA chr7-3659 chr7 44678188 44678398 + 8.01 0.000 intron (NM_002541, intron 9 of 22) intron (NM_002541, intron 9 of 22) -70273 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr8-3005 chr8 115668916 115669126 + 8.01 0.000 promoter-TSS (NM_001282903) promoter-TSS (NM_001282903) -46 NM_014112 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr3-7424 chr3 116002194 116002404 + 8.01 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) -97173 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr10-7752 chr10 33090703 33090913 + 8.01 0.000 intron (NR_160030, intron 1 of 2) L2c|LINE|L2 25999 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr13-4210 chr13 93080732 93080942 + 8.01 0.000 Intergenic Intergenic 35496 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA chr12-7732 chr12 92561617 92561827 + 8.01 0.000 Intergenic Intergenic 95043 NR_144532 100507616 Hs.339918 NR_144532 LINC02397 - long intergenic non-protein coding RNA 2397 ncRNA chr3-5061 chr3 42063943 42064153 + 8.01 0.000 Intergenic Intergenic -23152 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr15-859 chr15 93073197 93073407 + 8.01 0.000 promoter-TSS (NM_001166286) promoter-TSS (NM_001166286) -146 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chrX-2676 chrX 117383493 117383703 + 8.01 0.000 Intergenic MIRb|SINE|MIR -565738 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr10-5122 chr10 50231384 50231594 + 8.01 0.000 intron (NM_001143974, intron 6 of 18) L2c|LINE|L2 17121 NM_019893 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr10-6587 chr10 80528346 80528556 + 8.01 0.000 3' UTR (NM_001351267, exon 11 of 11) 3' UTR (NM_001351267, exon 11 of 11) 7491 NR_120661 101929574 Hs.593663 NR_120661 ENSG00000226659 LOC101929574 - uncharacterized LOC101929574 ncRNA chr16-5908 chr16 2735740 2735950 + 8.01 0.000 Intergenic AluSx3|SINE|Alu 8952 NR_027274 100128788 Hs.311208 NR_027274 ENSG00000205913 SRRM2-AS1 - SRRM2 antisense RNA 1 ncRNA chrX-1617 chrX 111885137 111885347 + 8.01 0.000 intron (NM_001195577, intron 1 of 3) intron (NM_001195577, intron 1 of 3) 3345 NM_001195577 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr9-8724 chr9 132048521 132048731 + 8.01 0.000 intron (NM_001253881, intron 2 of 6) intron (NM_001253881, intron 2 of 6) 31241 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr20-2153 chr20 37644515 37644725 + 8.01 0.000 Intergenic L2b|LINE|L2 -21501 NR_047461 100861522 Hs.580680 NR_047461 ENSG00000225759 LINC00489 - long intergenic non-protein coding RNA 489 ncRNA chr20-883 chr20 25195631 25195841 + 8.01 0.000 promoter-TSS (NM_001114089) promoter-TSS (NM_001114089) 24 NM_001247 955 Hs.500375 NM_001247 ENSG00000197586 ENTPD6 CD39L2|IL-6SAG|IL6ST2|NTPDase-6|dJ738P15.3 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding chrX-4588 chrX 72245547 72245757 + 8.01 0.000 intron (NM_001170747, intron 3 of 3) intron (NM_001170747, intron 3 of 3) -6625 NM_001009954 54821 Hs.47558 NM_017669 ENSG00000186871 ERCC6L PICH|RAD26L ERCC excision repair 6 like, spindle assembly checkpoint helicase protein-coding chr16-2862 chr16 87095716 87095926 + 8.01 0.000 Intergenic L1MC4|LINE|L1 38037 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chrX-3644 chrX 99112439 99112649 + 8.01 0.000 Intergenic Intergenic 1297729 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr14-4927 chr14 73997949 73998159 + 8.01 0.000 intron (NM_001330189, intron 3 of 16) LTR3B|LTR|ERVK 21234 NM_001321988 957 Hs.655070 NM_001249 ENSG00000187097 ENTPD5 CD39L4|NTPDase-5|PCPH ectonucleoside triphosphate diphosphohydrolase 5 (inactive) protein-coding chr9-5165 chr9 62870002 62870212 + 8.01 0.000 intron (NR_122076, intron 1 of 5) L1MD2|LINE|L1 -27269 NR_126047 728673 Hs.380240 NR_126047 ENSG00000170161 LOC728673 - uncharacterized LOC728673 ncRNA chr19-4936 chr19 44522774 44522984 + 8.01 0.000 exon (NM_001102598, exon 4 of 10) exon (NM_001102598, exon 4 of 10) 6796 NM_001102597 125931 Hs.689632 NM_198444 ENSG00000273777 CEACAM20 UNQ9366 carcinoembryonic antigen related cell adhesion molecule 20 protein-coding chr10-6809 chr10 14673465 14673675 + 8.01 0.000 intron (NM_031453, intron 1 of 4) L1MA5|LINE|L1 -69169 NM_001282697 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr6-7792 chr6 97788031 97788241 + 8.01 0.000 Intergenic L1MC1|LINE|L1 -236395 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr1-7264 chr1 231596063 231596273 + 8.01 0.000 intron (NR_034037, intron 1 of 1) LTR78|LTR|ERV1 15922 NR_034037 100287814 Hs.25555 NR_034037 ENSG00000229228 LINC00582 - long intergenic non-protein coding RNA 582 ncRNA chr6-3084 chr6 81552573 81552783 + 8.01 0.000 Intergenic Intergenic 200003 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr15-3447 chr15 91743010 91743220 + 8.01 0.000 Intergenic Intergenic -110593 NM_013272 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr11-6475 chr11 67696958 67697168 + 8.01 0.000 Intergenic Intergenic -15839 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr3-3860 chr3 37440410 37440620 + 8.01 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -11626 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr7-5606 chr7 50962994 50963204 + 8.01 0.000 Intergenic Intergenic -169646 NM_001371008 chr4-5312 chr4 180807923 180808133 + 8.01 0.000 Intergenic Intergenic 351121 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr10-6862 chr10 28436382 28436592 + 8.01 0.000 intron (NR_134496, intron 1 of 2) intron (NR_134496, intron 1 of 2) 59326 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chr5-5630 chr5 154788221 154788431 + 8.01 0.000 intron (NM_001367719, intron 1 of 18) intron (NM_001367719, intron 1 of 18) 31172 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr2-13760 chr2 170598476 170598686 + 8.01 0.000 intron (NM_001083615, intron 31 of 33) intron (NM_001083615, intron 31 of 33) 115986 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr2-13721 chr2 167701402 167701612 + 8.01 0.000 Intergenic Intergenic -117165 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr7-3341 chr7 75876480 75876690 + 8.01 0.000 Intergenic AluSg7|SINE|Alu -2407 NR_144391 57414 Hs.488827 NM_020684 ENSG00000005486 RHBDD2 NPD007|RHBDL7 rhomboid domain containing 2 protein-coding chr10-2454 chr10 16756942 16757152 + 8.01 0.000 intron (NM_152724, intron 3 of 7) (TG)n|Simple_repeat|Simple_repeat 60377 NM_012425 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr17-8187 chr17 62276928 62277138 + 8.01 0.000 Intergenic Intergenic -1378 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr15-4943 chr15 78202792 78203002 + 8.01 0.000 intron (NM_015162, intron 2 of 13) L1ME4a|LINE|L1 31668 NM_015162 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr2-14037 chr2 194350775 194350985 + 8.01 0.000 intron (NR_110222, intron 1 of 5) MLT2A1|LTR|ERVL 6611 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr9-5515 chr9 106010416 106010626 + 8.01 0.000 Intergenic Intergenic 315980 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr8-7262 chr8 129631543 129631753 + 8.01 0.000 intron (NR_130917, intron 1 of 3) intron (NR_130917, intron 1 of 3) 48591 NR_130917 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr11-6928 chr11 110508766 110508976 + 8.01 0.000 Intergenic Intergenic 78923 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chrX-1022 chrX 65133489 65133699 + 8.01 0.000 Intergenic HERVH-int|LTR|ERV1 -98853 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr13-1453 chr13 73913062 73913272 + 8.01 0.000 intron (NM_007249, intron 3 of 7) L2b|LINE|L2 220762 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr3-4243 chr3 141321253 141321463 + 8.01 0.000 Intergenic Intergenic -2828 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr10-5160 chr10 55894595 55894805 + 8.01 0.000 Intergenic Intergenic -266758 NM_001354404 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding chr5-8532 chr5 134742606 134742816 + 8.01 0.000 intron (NM_001745, intron 2 of 3) intron (NM_001745, intron 2 of 3) 4163 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr14-3278 chr14 81444726 81444936 + 8.01 0.000 intron (NR_109999, intron 1 of 2) L2c|LINE|L2 5326 NR_109999 100506700 Hs.116304 NR_109999 ENSG00000258675 LINC02308 - long intergenic non-protein coding RNA 2308 ncRNA chr2-8359 chr2 109521465 109521675 + 8.01 0.000 Intergenic Intergenic 92097 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr8-5666 chr8 115344184 115344394 + 8.01 0.000 Intergenic Intergenic 323724 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr6-6829 chr6 7202049 7202259 + 8.01 0.000 intron (NM_001003699, intron 6 of 12) intron (NM_001003699, intron 6 of 12) 94193 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr2-12900 chr2 99398453 99398663 + 8.01 0.000 intron (NM_015904, intron 22 of 23) intron (NM_015904, intron 22 of 23) 61169 NM_015904 9669 Hs.158688 NM_015904 ENSG00000158417 EIF5B IF2 eukaryotic translation initiation factor 5B protein-coding chr2-11298 chr2 189702096 189702306 + 8.01 0.000 intron (NM_144708, intron 7 of 22) L1MCa|LINE|L1 26216 NM_144708 150709 Hs.60772 NM_144708 ENSG00000151687 ANKAR - ankyrin and armadillo repeat containing protein-coding chr12-4997 chr12 79214752 79214962 + 8.01 0.000 intron (NM_005639, intron 3 of 10) intron (NM_005639, intron 3 of 10) 169165 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr19-3282 chr19 3336922 3337132 + 8.01 0.000 Intergenic Intergenic -22603 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr4-3602 chr4 7112038 7112248 + 8.01 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -8767 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr7-6210 chr7 130945615 130945825 + 8.01 0.000 non-coding (NR_015431, exon 5 of 5) non-coding (NR_015431, exon 5 of 5) 32256 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr9-5661 chr9 122797995 122798205 + 8.01 0.000 Intergenic Intergenic -2023 NM_080859 392392 Hs.632681 NM_080859 ENSG00000165204 OR1K1 hg99 olfactory receptor family 1 subfamily K member 1 protein-coding chr10-2959 chr10 50875717 50875927 + 8.01 0.000 intron (NM_001198818, intron 1 of 13) intron (NM_001198818, intron 1 of 13) 9805 NM_001370130 29974 Hs.282795 NM_014576 ENSG00000148584 A1CF ACF|ACF64|ACF65|APOBEC1CF|ASP APOBEC1 complementation factor protein-coding chr1-9523 chr1 38945594 38945804 + 8.01 0.000 Intergenic AluSp|SINE|Alu -3869 NM_017821 54933 Hs.524626 NM_017821 ENSG00000158315 RHBDL2 RRP2 rhomboid like 2 protein-coding chr11-10327 chr11 109596585 109596795 + 8.01 0.000 Intergenic AluSx1|SINE|Alu 174500 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr18-2319 chr18 591826 592036 + 8.01 0.000 Intergenic L1MDa|LINE|L1 -5067 NM_001289036 27098 Hs.732341 NM_014410 ENSG00000079101 CLUL1 RA337M clusterin like 1 protein-coding ML143372.1-1 ML143372.1 322153 322363 + 8.01 0.000 NA NA NA NA chr1-7502 chr1 150528401 150528611 + 8.01 0.000 Intergenic L2a|LINE|L2 12749 NR_051960 100874054 Hs.576460 NR_051960 ENSG00000228126 FALEC FAL1|LINC00568|ncRNA-a1 focally amplified long non-coding RNA in epithelial cancer ncRNA chrX-4611 chrX 74447656 74447866 + 8.01 0.000 intron (NM_006517, intron 1 of 5) AluSz6|SINE|Alu 26268 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr2-11454 chr2 227901823 227902033 + 8.01 0.000 intron (NM_178821, intron 6 of 12) intron (NM_178821, intron 6 of 12) 30297 NM_178821 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chrX-1405 chrX 14343851 14344061 + 8.01 0.000 Intergenic Kanga11a|DNA|TcMar-Tc2 99691 NR_110506 286480 Hs.567831 NR_110506 UBE2E4P UbcM2 ubiquitin conjugating enzyme E2 E4 pseudogene pseudo chr1-15763 chr1 174123251 174123461 + 8.01 0.000 intron (NR_121197, intron 3 of 3) MSTA|LTR|ERVL-MaLR 35931 NR_121197 102724601 Hs.563791 NR_121197 ENSG00000227373 RABGAP1L-DT - RABGAP1L divergent transcript ncRNA chr1-8335 chr1 53809807 53810017 + 8.01 0.000 intron (NR_033142, intron 5 of 16) Tigger6b|DNA|TcMar-Tigger 28384 NM_001168551 55706 Hs.476525 NM_018087 ENSG00000058804 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding chr1-13953 chr1 24347507 24347717 + 8.01 0.000 intron (NM_198174, intron 14 of 15) intron (NM_198174, intron 14 of 15) 24572 NM_021180 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr1-6466 chr1 19676545 19676755 + 8.01 0.000 intron (NM_000871, intron 1 of 2) intron (NM_000871, intron 1 of 2) 11775 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr16-7035 chr16 88294548 88294758 + 8.01 0.000 Intergenic Intergenic 100372 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr16-6522 chr16 62647714 62647924 + 8.01 0.000 Intergenic MER52-int|LTR|ERV1 -611381 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr12-1786 chr12 117687131 117687341 + 8.01 0.000 intron (NM_173598, intron 4 of 19) intron (NM_173598, intron 4 of 19) 281754 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr7-5380 chr7 32061474 32061684 + 8.01 0.000 intron (NM_001191059, intron 2 of 18) intron (NM_001191059, intron 2 of 18) 8828 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr20-3827 chr20 24266504 24266714 + 8.01 0.000 Intergenic MIR|SINE|MIR 66842 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr3-11139 chr3 188062237 188062447 + 8.01 0.000 Intergenic Intergenic -85935 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr8-5709 chr8 128030486 128030696 + 8.01 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) -18561 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr12-2033 chr12 56188863 56189073 + 8.01 0.000 intron (NM_001330288, intron 1 of 28) CpG 515 NM_001330288 6601 Hs.236030 NM_003075 ENSG00000139613 SMARCC2 BAF170|CRACC2|CSS8|Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 protein-coding chr11-4901 chr11 61031499 61031709 + 8.01 0.000 Intergenic L1MC3|LINE|L1 59924 NM_001254751 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr12-1699 chr12 132457756 132457966 + 8.01 0.000 Intergenic Intergenic -32290 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr5-8627 chr5 139708278 139708488 + 8.01 0.000 Intergenic L2a|LINE|L2 32940 NM_001317211 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr1-14006 chr1 26044812 26045022 + 8.01 0.000 intron (NM_001004434, intron 2 of 7) MIR|SINE|MIR 1201 NM_032513 7780 Hs.143545 NM_032513 ENSG00000158014 SLC30A2 PP12488|TNZD|ZNT2|ZnT-2 solute carrier family 30 member 2 protein-coding chr1-10539 chr1 170776008 170776218 + 8.01 0.000 Intergenic L2c|LINE|L2 111982 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr2-12489 chr2 62341446 62341656 + 8.01 0.000 Intergenic Intergenic 126030 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr8-6648 chr8 78918090 78918300 + 8.01 0.000 Intergenic L1MA2|LINE|L1 80666 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA chr10-2793 chr10 132554613 132554823 + 8.01 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 16931 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr11-6995 chr11 117073910 117074120 + 8.01 0.000 intron (NM_001366687, intron 1 of 4) AluJo|SINE|Alu 24413 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr3-7400 chr3 95874898 95875108 + 8.01 0.000 Intergenic L1PA7|LINE|L1 -191810 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr17-3571 chr17 80104353 80104563 + 8.01 0.000 intron (NM_000152, intron 1 of 19) intron (NM_000152, intron 1 of 19) 2877 NM_001079803 2548 Hs.1437 NM_000152 ENSG00000171298 GAA LYAG glucosidase alpha, acid protein-coding chrX-1571 chrX 63809265 63809475 + 8.01 0.000 Intergenic Intergenic -23283 NR_031567 100302115 NR_031567 ENSG00000222532 MIR1468 MIRN1468|hsa-mir-1468|mir-1468 microRNA 1468 ncRNA chr16-4936 chr16 90048558 90048768 + 8.01 0.000 promoter-TSS (NR_027336) promoter-TSS (NR_027336) -880 NR_027336 100130015 Hs.431792 NR_027335 ENSG00000222019 URAHP URAH urate (hydroxyiso-) hydrolase, pseudogene pseudo chr13-4426 chr13 110626694 110626904 + 8.01 0.000 intron (NM_001242882, intron 4 of 9) L2|LINE|L2 11215 NM_001242881 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr3-10714 chr3 153772965 153773175 + 8.01 0.000 Intergenic L1PA15-16|LINE|L1 -10544 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr7-6511 chr7 22948572 22948782 + 8.01 0.000 intron (NM_001363467, intron 10 of 11) intron (NM_001363467, intron 10 of 11) 65453 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr17-7348 chr17 6476275 6476485 + 8.01 0.000 intron (NM_031220, intron 9 of 19) intron (NM_031220, intron 9 of 19) 31925 NM_001195228 54478 Hs.592116 NM_019013 ENSG00000129195 PIMREG CATS|FAM64A|RCS1 PICALM interacting mitotic regulator protein-coding chr4-2404 chr4 82055120 82055330 + 8.01 0.000 Intergenic L2c|LINE|L2 318766 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr1-9371 chr1 30011963 30012173 + 8.01 0.000 Intergenic Intergenic 25544 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr16-3029 chr16 48059264 48059474 + 8.01 0.000 Intergenic SVA_A|Retroposon|SVA 87401 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr10-3810 chr10 132643703 132643913 + 8.01 0.000 intron (NM_005539, intron 2 of 15) intron (NM_005539, intron 2 of 15) -37467 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr4-5291 chr4 176628104 176628314 + 8.01 0.000 Intergenic Intergenic 164713 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr8-5308 chr8 143226113 143226323 + 8.01 0.000 Intergenic Intergenic 13000 NM_001301772 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr10-4119 chr10 71639706 71639916 + 8.01 0.000 intron (NM_052836, intron 11 of 12) intron (NM_052836, intron 11 of 12) 79967 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr17-6340 chr17 67692835 67693045 + 8.01 0.000 3' UTR (NM_012417, exon 9 of 9) 3' UTR (NM_012417, exon 9 of 9) -24893 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr14-2077 chr14 69567830 69568040 + 8.01 0.000 Intergenic Intergenic 6936 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr17-6779 chr17 3136201 3136411 + 8.01 0.000 intron (NR_147912, intron 3 of 3) intron (NR_147912, intron 3 of 3) -8755 NM_003555 8390 Hs.248183 NM_003555 ENSG00000183024 OR1G1 OR17-130|OR17-209|OR1G2 olfactory receptor family 1 subfamily G member 1 protein-coding chr4-4769 chr4 99395146 99395356 + 8.01 0.000 Intergenic Intergenic 39883 NM_001166504 131 Hs.389 NM_000673 ENSG00000196344 ADH7 ADH4 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding chr5-8263 chr5 112120361 112120571 + 8.01 0.000 Intergenic Intergenic -40060 NR_015370 114915 Hs.12082 NM_053000 EPB41L4A-AS1 C5orf26|NCRNA00219|TIGA1 EPB41L4A antisense RNA 1 ncRNA chr19-6289 chr19 8202511 8202721 + 8.01 0.000 Intergenic AluSp|SINE|Alu -6754 NM_024552 79603 Hs.515111 NM_024552 ENSG00000090661 CERS4 LASS4|Trh1 ceramide synthase 4 protein-coding chr6-8280 chr6 141799296 141799506 + 8.01 0.000 Intergenic L1MC1|LINE|L1 289398 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr1-7033 chr1 174883425 174883635 + 8.01 0.000 intron (NM_001366451, intron 5 of 12) intron (NM_001366451, intron 5 of 12) 8012 NM_001035230 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr10-5841 chr10 113199622 113199832 + 8.01 0.000 Intergenic L1M3c|LINE|L1 70456 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr3-8545 chr3 144900464 144900674 + 8.01 0.000 Intergenic Intergenic 927488 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr7-6840 chr7 44532018 44532228 + 8.01 0.000 exon (NM_001101648, exon 9 of 19) exon (NM_001101648, exon 9 of 19) 9207 NM_001300967 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr9-8355 chr9 116948062 116948272 + 8.01 0.000 intron (NM_014010, intron 9 of 21) L1MC4|LINE|L1 233034 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr1-14342 chr1 40649803 40650013 + 8.01 0.000 intron (NM_014747, intron 1 of 7) intron (NM_014747, intron 1 of 7) 15774 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr2-11631 chr2 5069828 5070038 + 8.01 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -413711 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr4-7993 chr4 114768186 114768396 + 8.01 0.000 Intergenic L2c|LINE|L2 111532 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chr17-5746 chr17 59214384 59214594 + 8.01 0.000 intron (NM_018149, intron 3 of 3) AluSx3|SINE|Alu 4479 NM_018149 55181 Hs.7296 NM_018149 ENSG00000167447 SMG8 C17orf71 SMG8 nonsense mediated mRNA decay factor protein-coding chr8-7328 chr8 133794483 133794693 + 8.01 0.000 Intergenic MIR|SINE|MIR -17236 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr1-16473 chr1 228286937 228287147 + 8.01 0.000 intron (NM_052843, intron 35 of 80) intron (NM_052843, intron 35 of 80) -73378 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr11-3835 chr11 68634411 68634621 + 8.01 0.000 Intergenic HERVH-int|LTR|ERV1 -50028 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr7-5671 chr7 65235984 65236194 + 8.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR 95059 NR_146906 285905 Hs.567827 NM_182596 ENSG00000164669 INTS4P1 INTS4L1 integrator complex subunit 4 pseudogene 1 pseudo chr6-5450 chr6 158474364 158474574 + 8.01 0.000 intron (NM_020245, intron 6 of 13) intron (NM_020245, intron 6 of 13) -61967 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr2-12486 chr2 62148082 62148292 + 8.01 0.000 Intergenic L1ME3Cz|LINE|L1 -47928 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr9-4632 chr9 111899996 111900206 + 8.01 0.000 intron (NM_003358, intron 1 of 8) intron (NM_003358, intron 1 of 8) 3287 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr11-10219 chr11 98153226 98153436 + 8.01 0.000 Intergenic LTR82A|LTR|ERVL -867618 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr15-1278 chr15 94501000 94501210 + 8.01 0.000 Intergenic L1MA9|LINE|L1 145175 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr22-2278 chr22 33302853 33303063 + 8.01 0.000 intron (NM_133642, intron 12 of 14) MIRb|SINE|MIR 133711 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr9-2521 chr9 116166168 116166378 + 8.01 0.000 intron (NM_002581, intron 1 of 21) intron (NM_002581, intron 1 of 21) 12482 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr4-8321 chr4 145299593 145299803 + 8.01 0.000 Intergenic Intergenic 40721 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr15-2647 chr15 73722385 73722595 + 8.01 0.000 Intergenic Intergenic 28985 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr5-4725 chr5 43401893 43402103 + 8.01 0.000 intron (NM_001301874, intron 1 of 3) LTR41|LTR|ERVL -4861 NM_001301875 56477 Hs.656904 NM_019846 ENSG00000151882 CCL28 CCK1|MEC|SCYA28 C-C motif chemokine ligand 28 protein-coding chr1-13198 chr1 207912581 207912791 + 8.01 0.000 Intergenic Intergenic -1561 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr11-5920 chr11 14345723 14345933 + 8.01 0.000 intron (NM_001177314, intron 1 of 5) intron (NM_001177314, intron 1 of 5) 12657 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr7-8434 chr7 47268757 47268967 + 8.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 195941 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr1-9344 chr1 28718835 28719045 + 8.01 0.000 3' UTR (NM_006582, exon 10 of 10) 3' UTR (NM_006582, exon 10 of 10) -17681 NM_001173128 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr22-2267 chr22 31539700 31539910 + 8.01 0.000 intron (NM_001007467, intron 4 of 32) AluSx|SINE|Alu 43269 NM_001258326 9814 Hs.62209 NM_014775 ENSG00000198089 SFI1 PISD|PPP1R139|hSfi1p SFI1 centrin binding protein protein-coding chr9-7129 chr9 131522430 131522640 + 8.01 0.000 intron (NR_148397, intron 18 of 18) intron (NR_148397, intron 18 of 18) 8728 NM_031432 83549 Hs.9597 NM_031432 ENSG00000130717 UCK1 URK1 uridine-cytidine kinase 1 protein-coding chr9-4451 chr9 21586448 21586658 + 8.01 0.000 Intergenic Intergenic -26755 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr12-7415 chr12 58234268 58234478 + 8.01 0.000 Intergenic Intergenic 146481 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chr12-7047 chr12 39964532 39964742 + 8.01 0.000 intron (NM_052885, intron 3 of 9) intron (NM_052885, intron 3 of 9) 141444 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chrX-4275 chrX 41429924 41430134 + 8.01 0.000 Intergenic Intergenic -17431 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr11-10019 chr11 81146039 81146249 + 8.01 0.000 Intergenic Intergenic -383341 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr17-1701 chr17 40177409 40177619 + 8.01 0.000 promoter-TSS (NM_016339) promoter-TSS (NM_016339) 44 NM_016339 51195 Hs.632254 NM_016339 ENSG00000108352 RAPGEFL1 Link-GEFII Rap guanine nucleotide exchange factor like 1 protein-coding chr1-14052 chr1 28195981 28196191 + 8.01 0.000 Intergenic Intergenic -2150 NM_001164721 5724 Hs.77542 NM_000952 ENSG00000169403 PTAFR PAFR platelet activating factor receptor protein-coding chr6-5380 chr6 151519370 151519580 + 8.01 0.000 intron (NM_025059, intron 1 of 10) MER11A|LTR|ERVK 25458 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chrX-3632 chrX 93657118 93657328 + 8.01 0.000 Intergenic Intergenic 16355 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr11-7300 chr11 46490733 46490943 + 8.01 0.000 intron (NM_001267782, intron 13 of 19) L2a|LINE|L2 -38949 NR_036117 100422827 NR_036117 ENSG00000265014 MIR3160-1 mir-3160-1 microRNA 3160-1 ncRNA chr13-4235 chr13 95871472 95871682 + 8.01 0.000 intron (NM_020121, intron 29 of 38) LTR78|LTR|ERV1 181824 NM_020121 55757 Hs.193226 NM_020121 ENSG00000102595 UGGT2 HUGT2|UGCGL2|UGT2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding chr2-9486 chr2 236036606 236036816 + 8.01 0.000 exon (NM_014914, exon 13 of 17) exon (NM_014914, exon 13 of 17) 131675 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr10-3252 chr10 124035051 124035261 + 8.01 0.000 intron (NM_014863, intron 5 of 5) intron (NM_014863, intron 5 of 5) 57250 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr6-6812 chr6 6739074 6739284 + 8.01 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -116353 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr18-3205 chr18 46439401 46439611 + 8.01 0.000 intron (NM_152470, intron 3 of 7) intron (NM_152470, intron 3 of 7) 79580 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr4-2019 chr4 2743130 2743340 + 8.01 0.000 intron (NM_001292016, intron 4 of 4) intron (NM_001292016, intron 4 of 4) 13101 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr9-7542 chr9 34807115 34807325 + 8.01 0.000 Intergenic L1MB8|LINE|L1 31366 NR_024481 389715 Hs.713965 NM_001126494 FAM205BP C9orf144|C9orf144A|FAM205B transmembrane protein C9orf144B pseudogene pseudo chr2-14753 chr2 239993632 239993842 + 8.01 0.000 intron (NR_136157, intron 6 of 7) intron (NR_136157, intron 6 of 7) 31605 NM_004544 4705 Hs.277677 NM_004544 ENSG00000130414 NDUFA10 CI-42KD|CI-42k|MC1DN22 NADH:ubiquinone oxidoreductase subunit A10 protein-coding chr1-11118 chr1 231465309 231465519 + 8.01 0.000 Intergenic L1MB2|LINE|L1 11111 NR_033826 645339 Hs.382049 NR_033826 SNRPD2P2 - small nuclear ribonucleoprotein D2 pseudogene 2 pseudo chr16-6792 chr16 78344618 78344828 + 8.01 0.000 intron (NM_001291997, intron 4 of 7) intron (NM_001291997, intron 4 of 7) 245069 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr1-13795 chr1 18570541 18570751 + 8.01 0.000 Intergenic AluJb|SINE|Alu -60200 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr4-5253 chr4 171355140 171355350 + 8.01 0.000 Intergenic L1P3|LINE|L1 169061 NR_106730 102466953 NR_106730 ENSG00000278502 MIR6082 hsa-mir-6082 microRNA 6082 ncRNA chrX-4729 chrX 91273924 91274134 + 8.01 0.000 Intergenic HERVL40-int|LTR|ERVL -160810 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chrX-5043 chrX 122866626 122866836 + 8.01 0.000 Intergenic Intergenic -317512 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr12-7710 chr12 91067283 91067493 + 8.01 0.000 Intergenic Intergenic -9034 NM_007035 11081 Hs.125750 NM_007035 ENSG00000139330 KERA CNA2|KTN|SLRR2B keratocan protein-coding chr12-7124 chr12 47231503 47231713 + 8.01 0.000 intron (NM_138371, intron 3 of 3) MER34D|LTR|ERV1 -15165 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA chr13-1904 chr13 49497964 49498174 + 8.01 0.000 intron (NM_001040444, intron 1 of 9) L2a|LINE|L2 1013 NM_001040444 51131 Hs.369039 NM_001040443 ENSG00000136147 PHF11 APY|BCAP|IGEL|IGER|IGHER|NY-REN-34|NYREN34 PHD finger protein 11 protein-coding chr15-5184 chr15 93205270 93205480 + 8.01 0.000 promoter-TSS (NM_001365393) promoter-TSS (NM_001365393) -691 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr11-4586 chr11 130677456 130677666 + 8.01 0.000 intron (NM_001271983, intron 1 of 2) intron (NM_001271983, intron 1 of 2) 4605 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding chr10-7994 chr10 60649443 60649653 + 8.01 0.000 intron (NM_001204403, intron 1 of 43) intron (NM_001204403, intron 1 of 43) -76592 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chrX-3552 chrX 65708113 65708323 + 8.01 0.000 intron (NM_002444, intron 1 of 12) L1MA5A|LINE|L1 40564 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr7-5230 chr7 15977744 15977954 + 8.01 0.000 Intergenic L2b|LINE|L2 -232637 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr11-8851 chr11 13002984 13003194 + 8.01 0.000 Intergenic Intergenic -6227 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr19-6558 chr19 19264260 19264470 + 8.01 0.000 TTS (NM_001001524) TTS (NM_001001524) -1561 NM_023002 404037 Hs.367829 NM_023002 ENSG00000187664 HAPLN4 BRAL2 hyaluronan and proteoglycan link protein 4 protein-coding chr15-2729 chr15 96625393 96625603 + 8.01 0.000 Intergenic Intergenic 156156 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr7-7237 chr7 25432596 25432806 + 8.01 0.000 Intergenic MIRb|SINE|MIR -204215 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr16-3906 chr16 80101415 80101625 + 8.01 0.000 Intergenic Intergenic 306271 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr11-6934 chr11 110984238 110984448 + 8.01 0.000 Intergenic Intergenic 112975 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr19-3610 chr19 55095118 55095328 + 8.01 0.000 intron (NM_001271618, intron 11 of 21) intron (NM_001271618, intron 11 of 21) 14831 NM_017729 54869 Hs.438862 NM_017729 ENSG00000131037 EPS8L1 DRC3|EPS8R1|PP10566 EPS8 like 1 protein-coding chr4-7151 chr4 38575450 38575660 + 8.01 0.000 Intergenic AluSx1|SINE|Alu 11552 NR_146991 105374411 NR_146991 LINC02278 - long intergenic non-protein coding RNA 2278 ncRNA chr1-13298 chr1 233368404 233368614 + 8.01 0.000 intron (NM_032435, intron 5 of 9) AluJb|SINE|Alu 40785 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chrX-4573 chrX 70663872 70664082 + 8.01 0.000 intron (NM_001003811, intron 17 of 30) MER2|DNA|TcMar-Tigger 182318 NR_145758 109617015 NR_145758 ENSG00000280704 SNORD3E - small nucleolar RNA, C/D box 3E snoRNA chr19-6117 chr19 3810741 3810951 + 8.01 0.000 intron (NM_015174, intron 15 of 18) CpG -9047 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr20-2069 chr20 15090038 15090248 + 8.01 0.000 intron (NM_001351663, intron 5 of 17) intron (NM_001351663, intron 5 of 17) -106697 NM_001351664 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr20-2959 chr20 33062965 33063175 + 8.01 0.000 intron (NM_182658, intron 5 of 14) intron (NM_182658, intron 5 of 14) 7739 NM_182658 359710 Hs.472442 NM_182658 ENSG00000186190 BPIFB3 C20orf185|LPLUNC3|RYA3 BPI fold containing family B member 3 protein-coding chr5-5299 chr5 126217571 126217781 + 8.01 0.000 Intergenic L1MC5a|LINE|L1 38099 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr9-8851 chr9 135709913 135710123 + 8.01 0.000 intron (NM_001272003, intron 1 of 30) intron (NM_001272003, intron 1 of 30) 7833 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr2-8272 chr2 101540590 101540800 + 8.01 0.000 Intergenic MER65C|LTR|ERV1 -65583 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr13-4212 chr13 93086418 93086628 + 8.01 0.000 Intergenic L1MB2|LINE|L1 41182 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA chr6-2728 chr6 72954681 72954891 + 8.01 0.000 intron (NM_001160132, intron 1 of 13) intron (NM_001160132, intron 1 of 13) 12967 NR_036244 100423005 NR_036244 ENSG00000266180 MIR4282 - microRNA 4282 ncRNA chr17-5994 chr17 77648631 77648841 + 8.01 0.000 Intergenic AluSz6|SINE|Alu 79823 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr16-5528 chr16 24669798 24670008 + 8.01 0.000 intron (NR_122072, intron 1 of 2) MIR|SINE|MIR 1159 NR_122072 400511 Hs.592028 NR_122072 ENSG00000224310 LINC01567 LOCCS long intergenic non-protein coding RNA 1567 ncRNA chr6-4138 chr6 166572583 166572793 + 8.01 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -27998 NM_001318938 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr1-9500 chr1 37576668 37576878 + 8.01 0.000 intron (NM_013285, intron 8 of 15) intron (NM_013285, intron 8 of 15) 19164 NM_013285 29889 Hs.75528 NM_013285 ENSG00000134697 GNL2 HUMAUANTIG|NGP1|Ngp-1|Nog2|Nug2 G protein nucleolar 2 protein-coding chr1-11461 chr1 90284464 90284674 + 8.01 0.000 Intergenic Intergenic 289459 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr8-6788 chr8 94947521 94947731 + 8.01 0.000 intron (NR_148906, intron 2 of 5) intron (NR_148906, intron 2 of 5) 1752 NM_001135733 94241 Hs.492261 NM_033285 ENSG00000164938 TP53INP1 SIP|TP53DINP1|TP53INP1A|TP53INP1B|Teap|p53DINP1 tumor protein p53 inducible nuclear protein 1 protein-coding chr2-7022 chr2 150358199 150358409 + 8.01 0.000 Intergenic MIR|SINE|MIR -101297 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr14-4560 chr14 45673095 45673305 + 8.01 0.000 Intergenic L1MA4|LINE|L1 42402 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr9-4171 chr9 17732384 17732594 + 8.01 0.000 intron (NM_003026, intron 1 of 8) L2c|LINE|L2 153423 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr1-12845 chr1 95512288 95512498 + 8.01 0.000 intron (NR_110622, intron 1 of 1) intron (NR_110622, intron 1 of 1) 2277 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA chr8-5507 chr8 59888638 59888848 + 8.01 0.000 Intergenic Intergenic 392657 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr4-3442 chr4 86904049 86904259 + 8.01 0.000 Intergenic LTR12D|LTR|ERV1 -11732 NM_144645 132989 Hs.339646 NM_144645 ENSG00000163633 C4orf36 - chromosome 4 open reading frame 36 protein-coding chr4-7941 chr4 109374292 109374502 + 8.01 0.000 Intergenic AluJr|SINE|Alu -59318 NM_001318085 10427 Hs.292472 NM_006323 ENSG00000138802 SEC24B SEC24 SEC24 homolog B, COPII coat complex component protein-coding chr1-9834 chr1 62337176 62337386 + 8.01 0.000 Intergenic Intergenic -17847 NM_001320269 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chrX-5387 chrX 151244761 151244971 + 8.01 0.000 Intergenic L1MA3|LINE|L1 -67030 NR_135300 100128688 Hs.460993 NR_135300 ENSG00000234696 GPR50-AS1 - GPR50 antisense RNA 1 ncRNA chr5-3281 chr5 113147279 113147489 + 8.01 0.000 intron (NM_001085377, intron 4 of 18) intron (NM_001085377, intron 4 of 18) 147554 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr14-4360 chr14 24818035 24818245 + 8.01 0.000 intron (NM_001351943, intron 6 of 6) intron (NM_001351943, intron 6 of 6) -183950 NR_144343 3002 Hs.1051 NM_004131 ENSG00000100453 GZMB C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B protein-coding chr8-3947 chr8 47051602 47051812 + 8.01 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -137600 NR_037168 100287846 Hs.21550 NR_037168 LOC100287846 - uncharacterized LOC100287846 ncRNA chr7-5916 chr7 98214355 98214565 + 8.01 0.000 TTS (NM_015395) TTS (NM_015395) 2206 NM_177455 168620 Hs.511979 NM_177455 ENSG00000180535 BHLHA15 BHLHB8|MIST1 basic helix-loop-helix family member a15 protein-coding chr10-5076 chr10 43977536 43977746 + 8.01 0.000 intron (NR_136147, intron 4 of 4) intron (NR_136147, intron 4 of 4) 65239 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr17-6463 chr17 16472624 16472834 + 8.01 0.000 intron (NM_207387, intron 1 of 2) MamRep1151|LTR?|LTR? 19464 NM_001113567 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr9-5341 chr9 89327635 89327845 + 8.01 0.000 intron (NM_001282688, intron 4 of 16) Tigger3b|DNA|TcMar-Tigger 8889 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr8-4561 chr8 126533192 126533402 + 8.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 25181 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chrX-2251 chrX 47179289 47179499 + 8.01 0.000 exon (NM_001204467, exon 9 of 24) exon (NM_001204467, exon 9 of 24) -11453 NM_153280 7317 Hs.533273 NM_003334 ENSG00000130985 UBA1 A1S9|A1S9T|A1ST|AMCX1|CFAP124|GXP1|POC20|SMAX2|UBA1A|UBE1|UBE1X ubiquitin like modifier activating enzyme 1 protein-coding chr1-13478 chr1 3616823 3617033 + 8.01 0.000 Intergenic Intergenic -5420 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chr1-16405 chr1 224640571 224640781 + 8.01 0.000 intron (NM_152495, intron 1 of 5) intron (NM_152495, intron 1 of 5) 24359 NM_152495 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr6-5378 chr6 151438030 151438240 + 8.01 0.000 intron (NM_001271937, intron 1 of 10) intron (NM_001271937, intron 1 of 10) 13991 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr5-6369 chr5 139167967 139168177 + 8.01 0.000 intron (NM_022464, intron 1 of 9) Tigger3c|DNA|TcMar-Tigger 30296 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr11-7960 chr11 6757417 6757627 + 8.01 0.000 Intergenic LTR81B|LTR|Gypsy 11435 NM_001004490 338755 Hs.534614 NM_001004490 ENSG00000188124 OR2AG2 OR11-76|OR2AG2P olfactory receptor family 2 subfamily AG member 2 protein-coding chr3-8134 chr3 27142372 27142582 + 8.01 0.000 intron (NM_001031741, intron 10 of 15) intron (NM_001031741, intron 10 of 15) 74046 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr5-5666 chr5 159239203 159239413 + 8.01 0.000 intron (NR_134261, intron 2 of 2) AluJr|SINE|Alu 11593 NR_134261 105377682 NR_134261 ENSG00000253315 LINC01932 - long intergenic non-protein coding RNA 1932 ncRNA chr10-5954 chr10 122526440 122526650 + 8.01 0.000 Intergenic Intergenic -34120 NM_004406 1755 Hs.279611 NM_004406 ENSG00000187908 DMBT1 GP340|SAG|SALSA|muclin deleted in malignant brain tumors 1 protein-coding chr10-9036 chr10 123477183 123477393 + 8.01 0.000 Intergenic Intergenic -189067 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr12-8171 chr12 121830827 121831037 + 8.01 0.000 3' UTR (NM_001353345, exon 16 of 16) 3' UTR (NM_001353345, exon 16 of 16) 26208 NM_001353345 23067 Hs.507122 NM_015048 ENSG00000139718 SETD1B KMT2G|Set1B SET domain containing 1B, histone lysine methyltransferase protein-coding chr1-13546 chr1 7008903 7009113 + 8.01 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 223554 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr5-3278 chr5 112862157 112862367 + 8.01 0.000 intron (NM_001204196, intron 1 of 3) MER51A|LTR|ERV1 975 NM_001204199 6728 Hs.637001 NM_003135 ENSG00000153037 SRP19 - signal recognition particle 19 protein-coding chr2-13286 chr2 128651035 128651245 + 8.01 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -213460 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr9-2832 chr9 126268889 126269099 + 8.01 0.000 Intergenic Intergenic 6921 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr8-3635 chr8 665800 666010 + 8.01 0.000 intron (NR_156467, intron 5 of 5) intron (NR_156467, intron 5 of 5) 65319 NM_207332 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chr5-8906 chr5 156882851 156883061 + 8.01 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 32661 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr12-7578 chr12 76115510 76115720 + 8.01 0.000 Intergenic FLAM_C|SINE|Alu -30930 NM_001330231 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr12-7268 chr12 52366224 52366434 + 8.01 0.000 intron (NM_002283, intron 1 of 8) MIR|SINE|MIR 1152 NM_002283 3891 Hs.182507 NM_002283 ENSG00000135443 KRT85 ECTD4|HB5|Hb-5|K85|KRTHB5|hHb5 keratin 85 protein-coding chr8-7438 chr8 140770528 140770738 + 8.01 0.000 intron (NR_148037, intron 15 of 34) intron (NR_148037, intron 15 of 34) -37980 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr12-3061 chr12 6570768 6570978 + 8.01 0.000 exon (NM_001363606, exon 39 of 40) exon (NM_001363606, exon 39 of 40) -2582 NM_001258309 4839 Hs.534334 NM_006170 ENSG00000111641 NOP2 NOL1|NOP120|NSUN1|p120 NOP2 nucleolar protein protein-coding chr5-5529 chr5 144600581 144600791 + 8.01 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 395295 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr1-14800 chr1 71674358 71674568 + 8.01 0.000 intron (NM_173808, intron 4 of 6) intron (NM_173808, intron 4 of 6) 162549 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr8-7283 chr8 130989408 130989618 + 8.01 0.000 intron (NM_001115, intron 2 of 17) intron (NM_001115, intron 2 of 17) 51396 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr5-3633 chr5 138549295 138549505 + 8.01 0.000 Intergenic AluJr4|SINE|Alu -6164 NM_001364160 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr6-4869 chr6 88464862 88465072 + 8.01 0.000 Intergenic Intergenic 74402 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr6-8355 chr6 148571454 148571664 + 8.01 0.000 Intergenic MER54A|LTR|ERVL 62408 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr4-8492 chr4 159680750 159680960 + 8.01 0.000 intron (NR_146278, intron 2 of 2) L1MC2|LINE|L1 96929 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr14-3430 chr14 98204391 98204601 + 8.01 0.000 Intergenic Intergenic -226372 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr7-6035 chr7 109039981 109040191 + 8.01 0.000 Intergenic Intergenic -155499 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr3-3090 chr3 136678907 136679117 + 8.01 0.000 intron (NM_005862, intron 1 of 33) L1ME4b|LINE|L1 73366 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr10-6022 chr10 125783473 125783683 + 8.01 0.000 Intergenic Intergenic -7757 NM_147191 118856 Hs.314141 NM_147191 ENSG00000154485 MMP21 HTX7|MMP-21 matrix metallopeptidase 21 protein-coding chr4-6346 chr4 97496541 97496751 + 8.01 0.000 Intergenic Intergenic 129720 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr6-2575 chr6 53251092 53251302 + 8.01 0.000 Intergenic Intergenic -25796 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr20-1170 chr20 63997239 63997449 + 8.01 0.000 intron (NM_012469, intron 6 of 20) AluSx3|SINE|Alu 16212 NM_012469 24148 Hs.31334 NM_012469 ENSG00000101161 PRPF6 ANT-1|ANT1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|hPrp6 pre-mRNA processing factor 6 protein-coding chr2-5357 chr2 96110355 96110565 + 8.01 0.000 Intergenic Intergenic 6111 NM_000682 151 Hs.247686 NM_000682 ENSG00000274286 ADRA2B ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR adrenoceptor alpha 2B protein-coding chrX-2223 chrX 43169655 43169865 + 8.01 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -7234 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr7-4067 chr7 5140257 5140467 + 8.01 0.000 intron (NR_034163, intron 1 of 5) AluSx1|SINE|Alu 4184 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr16-6450 chr16 56995772 56995982 + 8.01 0.000 intron (NM_001330552, intron 1 of 47) MER113|DNA|hAT-Charlie 6320 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr10-5973 chr10 123848869 123849079 + 8.01 0.000 intron (NM_198148, intron 3 of 13) intron (NM_198148, intron 3 of 13) 42833 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr10-6682 chr10 111648072 111648282 + 8.01 0.000 Intergenic Intergenic 533886 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr3-9109 chr3 28994793 28995003 + 8.01 0.000 Intergenic L1MEg|LINE|L1 286041 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr15-1976 chr15 40825945 40826155 + 8.01 0.000 intron (NM_001130143, intron 1 of 4) intron (NM_001130143, intron 1 of 4) 2658 NM_001130143 54866 Hs.192927 NM_017726 ENSG00000166143 PPP1R14D CPI17-like|GBPI-1|GBPI1 protein phosphatase 1 regulatory inhibitor subunit 14D protein-coding chr6-3644 chr6 133428106 133428316 + 8.01 0.000 intron (NM_172103, intron 3 of 18) L2|LINE|L2 186712 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr7-8922 chr7 95246924 95247134 + 8.01 0.000 intron (NM_017650, intron 7 of 15) intron (NM_017650, intron 7 of 15) 77503 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr7-8515 chr7 54363740 54363950 + 8.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 33148 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr5-3608 chr5 116242286 116242496 + 8.01 0.000 intron (NM_001308080, intron 5 of 6) MIRb|SINE|MIR -13352 NR_162144 113219464 NR_162144 MIR12130 - microRNA 12130 ncRNA chr4-4271 chr4 23789866 23790076 + 8.01 0.000 Intergenic Intergenic 91321 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr12-4268 chr12 119989254 119989464 + 8.01 0.000 promoter-TSS (NM_207311) promoter-TSS (NM_207311) 123 NM_001367886 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chr14-3042 chr14 59215422 59215632 + 8.01 0.000 intron (NM_001270520, intron 1 of 24) intron (NM_001270520, intron 1 of 24) 26860 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr20-2948 chr20 20441479 20441689 + 8.01 0.000 intron (NM_020343, intron 37 of 39) intron (NM_020343, intron 37 of 39) 73480 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr2-4796 chr2 42398955 42399165 + 8.01 0.000 Intergenic AluJb|SINE|Alu -30103 NM_001319037 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr19-5106 chr19 56103543 56103753 + 8.01 0.000 intron (NM_001002836, intron 1 of 2) intron (NM_001002836, intron 1 of 2) 17647 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr12-5034 chr12 87270870 87271080 + 8.01 0.000 Intergenic Intergenic -59764 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr12-5401 chr12 121249097 121249307 + 8.01 0.000 intron (NM_172226, intron 13 of 15) intron (NM_172226, intron 13 of 15) 25383 NM_001270486 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr20-4027 chr20 36785883 36786093 + 8.01 0.000 3' UTR (NM_080627, exon 15 of 15) 3' UTR (NM_080627, exon 15 of 15) -12225 NM_001145318 79980 Hs.632268 NM_024918 ENSG00000149636 DSN1 C20orf172|KNL3|MIS13|dJ469A13.2|hKNL-3 DSN1 component of MIS12 kinetochore complex protein-coding chr10-8779 chr10 105262556 105262766 + 8.01 0.000 intron (NM_014978, intron 26 of 26) intron (NM_014978, intron 26 of 26) 557672 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr11-5082 chr11 114348394 114348604 + 8.01 0.000 Intergenic HERV17-int|LTR|ERV1 31540 NR_120567 101928940 Hs.409846 NR_120567 ENSG00000256195 LOC101928940 - uncharacterized LOC101928940 ncRNA chr2-8339 chr2 108905808 108906018 + 8.01 0.000 intron (NM_022336, intron 11 of 11) intron (NM_022336, intron 11 of 11) 83307 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr12-3755 chr12 47727308 47727518 + 8.01 0.000 Intergenic Intergenic -1923 NM_001172440 8909 Hs.997 NM_006025 ENSG00000111405 ENDOU P11|PP11|PRSS26 endonuclease, poly(U) specific protein-coding chr11-7215 chr11 134584233 134584443 + 8.01 0.000 Intergenic Intergenic 147856 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA chr10-3952 chr10 103290043 103290253 + 8.01 0.000 3' UTR (NM_032727, exon 3 of 3) 3' UTR (NM_032727, exon 3 of 3) 13010 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr19-6943 chr19 46985138 46985348 + 8.01 0.000 intron (NM_004491, intron 3 of 6) intron (NM_004491, intron 3 of 6) -34594 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr5-3205 chr5 81195108 81195318 + 8.01 0.000 intron (NM_006909, intron 18 of 26) intron (NM_006909, intron 18 of 26) -38107 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr11-9381 chr11 55015235 55015445 + 8.01 0.000 Intergenic ALR/Alpha|Satellite|centr -246815 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding chr4-7292 chr4 53055178 53055388 + 8.01 0.000 intron (NM_152540, intron 5 of 8) MIRb|SINE|MIR 192966 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr20-3725 chr20 17188065 17188275 + 8.01 0.000 Intergenic Intergenic -37937 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr3-9925 chr3 87696436 87696646 + 8.01 0.000 Intergenic LTR18B|LTR|ERVL -96165 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr6-7011 chr6 22298625 22298835 + 8.01 0.000 intron (NM_001163558, intron 1 of 5) intron (NM_001163558, intron 1 of 5) -1694 NM_000948 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr2-8400 chr2 114689148 114689358 + 8.01 0.000 intron (NM_001321908, intron 2 of 25) L1PA11|LINE|L1 144295 NR_132105 101927591 Hs.553019 NR_132105 ENSG00000231538 DPP10-AS3 - DPP10 antisense RNA 3 ncRNA chrX-2025 chrX 16300777 16300987 + 8.01 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger 133401 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - MAGE family member B17 protein-coding chr13-3558 chr13 24816986 24817196 + 8.01 0.000 intron (NM_031277, intron 15 of 35) L1MB4|LINE|L1 52922 NM_001184993 56163 Hs.97464 NM_031277 ENSG00000132972 RNF17 Mmip-2|SPATA23|TDRD4 ring finger protein 17 protein-coding chr14-3975 chr14 30875537 30875747 + 8.01 0.000 TTS (NR_038356) TTS (NR_038356) 1083 NM_004086 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr2-8052 chr2 72196959 72197169 + 8.01 0.000 intron (NR_135773, intron 19 of 21) intron (NR_135773, intron 19 of 21) -49202 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr3-4101 chr3 107001814 107002024 + 8.01 0.000 Intergenic (GA)n|Simple_repeat|Simple_repeat 238719 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr14-4743 chr14 61651239 61651449 + 8.01 0.000 intron (NR_039985, intron 2 of 2) LTR79|LTR|ERVL -44169 NM_001530 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr1-9189 chr1 21557886 21558096 + 8.01 0.000 intron (NM_001369804, intron 2 of 11) L1ME3|LINE|L1 6721 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr6-7123 chr6 35454081 35454291 + 8.01 0.000 intron (NM_021922, intron 1 of 9) AluSx4|SINE|Alu 1825 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr19-6298 chr19 8462925 8463135 + 8.01 0.000 intron (NM_005968, intron 3 of 15) intron (NM_005968, intron 3 of 15) 18055 NM_001297418 4670 Hs.465808 NM_005968 ENSG00000099783 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding chr10-9046 chr10 124307092 124307302 + 8.01 0.000 Intergenic MER45B|DNA|hAT-Tip100 111726 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr9-5911 chr9 132847327 132847537 + 8.01 0.000 intron (NM_001317959, intron 6 of 14) intron (NM_001317959, intron 6 of 14) -30912 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr12-4762 chr12 52612367 52612577 + 8.01 0.000 non-coding (NR_126005, exon 2 of 3) non-coding (NR_126005, exon 2 of 3) 2621 NR_126005 100127967 Hs.689466 NR_126005 ENSG00000257495 KRT73-AS1 - KRT73 antisense RNA 1 ncRNA chr2-13769 chr2 171240818 171241028 + 8.01 0.000 Intergenic L3|LINE|CR1 -9630 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr11-10543 chr11 120514267 120514477 + 8.01 0.000 intron (NM_014619, intron 1 of 20) MIRc|SINE|MIR 2626 NM_014619 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr3-9975 chr3 97848981 97849191 + 8.01 0.000 intron (NM_153605, intron 2 of 21) MIRb|SINE|MIR 27075 NM_153605 131544 Hs.733378 NM_153605 ENSG00000080200 CRYBG3 DKFZp667G2110|vlAKAP crystallin beta-gamma domain containing 3 protein-coding chr11-6687 chr11 77195848 77196058 + 8.01 0.000 intron (NM_001127180, intron 32 of 48) MLT1B|LTR|ERVL-MaLR 67707 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr2-13582 chr2 156803853 156804063 + 8.01 0.000 Intergenic Intergenic 367579 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chrX-1819 chrX 98506900 98507110 + 8.01 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -942470 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr8-5495 chr8 54747812 54748022 + 8.01 0.000 Intergenic Intergenic 131821 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr8-4725 chr8 141686141 141686351 + 8.01 0.000 Intergenic MIRc|SINE|MIR 100067 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr16-3549 chr16 49776441 49776651 + 8.01 0.000 intron (NM_001271620, intron 2 of 7) intron (NM_001271620, intron 2 of 7) 46192 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr11-6851 chr11 98184303 98184513 + 8.01 0.000 Intergenic Intergenic -836541 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr22-2999 chr22 19749331 19749541 + 8.01 0.000 Intergenic Intergenic -7267 NM_080647 6899 Hs.173984 NM_005992 ENSG00000184058 TBX1 CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS T-box transcription factor 1 protein-coding chr12-4565 chr12 29133512 29133722 + 8.01 0.000 Intergenic MER61D|LTR|ERV1 -15661 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr7-3988 chr7 137987866 137988076 + 8.01 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 14115 NM_194071 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr2-8861 chr2 175259304 175259514 + 8.01 0.000 Intergenic MIRb|SINE|MIR -77699 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr1-13847 chr1 20288323 20288533 + 8.01 0.000 Intergenic Intergenic -2447 NM_001039500 127731 Hs.205178 NM_144623 ENSG00000158816 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding chr3-8773 chr3 4088983 4089193 + 8.01 0.000 Intergenic Intergenic -214216 NM_001320677 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr8-4160 chr8 78063607 78063817 + 8.01 0.000 Intergenic MER1A|DNA|hAT-Charlie -452628 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr3-6266 chr3 70970939 70971149 + 8.01 0.000 intron (NR_146142, intron 17 of 19) intron (NR_146142, intron 17 of 19) 93880 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr3-3516 chr3 27661777 27661987 + 8.01 0.000 Intergenic THE1C|LTR|ERVL-MaLR 60441 NM_001278182 8320 Hs.591663 NM_005442 ENSG00000163508 EOMES TBR2 eomesodermin protein-coding chr12-6218 chr12 26967678 26967888 + 8.01 0.000 Intergenic Intergenic 29313 NM_015633 26127 Hs.591162 NM_015633 ENSG00000111790 FGFR1OP2 HSPC123-like|WIT3.0 FGFR1 oncogene partner 2 protein-coding chrX-4942 chrX 111390659 111390869 + 8.01 0.000 intron (NM_178152, intron 3 of 6) AluJb|SINE|Alu 20382 NM_000555 1641 Hs.34780 NM_000555 ENSG00000077279 DCX DBCN|DC|LISX|SCLH|XLIS doublecortin protein-coding chr3-5083 chr3 45886498 45886708 + 8.01 0.000 promoter-TSS (NM_001256369) promoter-TSS (NM_001256369) 60 NM_006641 10803 Hs.225946 NM_006641 ENSG00000173585 CCR9 CC-CKR-9|CDw199|GPR-9-6|GPR28 C-C motif chemokine receptor 9 protein-coding chr9-7559 chr9 35518116 35518326 + 8.01 0.000 intron (NM_001330740, intron 1 of 10) intron (NM_001330740, intron 1 of 10) -20411 NM_001135999 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr8-5407 chr8 27902462 27902672 + 8.01 0.000 intron (NM_173833, intron 7 of 8) intron (NM_173833, intron 7 of 8) -16451 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr5-6692 chr5 63250107 63250317 + 8.01 0.000 Intergenic Intergenic 671393 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr5-3318 chr5 128201362 128201572 + 8.01 0.000 Intergenic Intergenic 117701 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr1-13366 chr1 1222701 1222911 + 8.01 0.000 intron (NM_016176, intron 4 of 6) intron (NM_016176, intron 4 of 6) -8653 NM_003327 7293 Hs.129780 NM_003327 ENSG00000186827 TNFRSF4 ACT35|CD134|IMD16|OX40|TXGP1L TNF receptor superfamily member 4 protein-coding chr18-2623 chr18 34276944 34277154 + 8.01 0.000 Intergenic L1MA1|LINE|L1 -53498 NM_001353237 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr16-3793 chr16 31959953 31960163 + 8.01 0.000 Intergenic Intergenic 86251 NM_003414 10308 Hs.460645 NM_003414 ENSG00000185947 ZNF267 HZF2 zinc finger protein 267 protein-coding chr4-5590 chr4 182231279 182231489 + 8.01 0.000 Intergenic Intergenic -12018 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr12-7859 chr12 104521762 104521972 + 8.01 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) 64919 NM_001173982 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr10-7609 chr10 21402822 21403032 + 8.01 0.000 Intergenic Intergenic -29977 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr14-2852 chr14 30355626 30355836 + 8.01 0.000 Intergenic Intergenic -203392 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr4-5436 chr4 17856124 17856334 + 8.01 0.000 intron (NM_001365665, intron 4 of 4) MLT1B|LTR|ERVL-MaLR 45250 NR_073124 64151 Hs.567567 NM_022346 ENSG00000109805 NCAPG CAPG|CHCG|NY-MEL-3|YCG1 non-SMC condensin I complex subunit G protein-coding chr16-2990 chr16 24544605 24544815 + 8.01 0.000 intron (NM_018703, intron 1 of 16) intron (NM_018703, intron 1 of 16) 5123 NM_032626 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding chr9-7460 chr9 27398440 27398650 + 8.01 0.000 intron (NM_024761, intron 2 of 3) MIRb|SINE|MIR -101395 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chr4-1928 chr4 85084674 85084884 + 8.01 0.000 Intergenic Intergenic 117295 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr13-2595 chr13 73586811 73587021 + 8.01 0.000 intron (NR_047009, intron 1 of 2) AluSx|SINE|Alu 22672 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr15-3099 chr15 64286031 64286241 + 8.01 0.000 intron (NM_001329607, intron 2 of 11) intron (NM_001329607, intron 2 of 11) 70037 NM_001329607 53944 Hs.646508 NM_022048 ENSG00000169118 CSNK1G1 CK1gamma1 casein kinase 1 gamma 1 protein-coding chr9-6388 chr9 33427508 33427718 + 8.01 0.000 Intergenic L2c|LINE|L2 19980 NM_004925 360 Hs.234642 NM_004925 ENSG00000165272 AQP3 AQP-3|GIL aquaporin 3 (Gill blood group) protein-coding chrX-3952 chrX 11386454 11386664 + 8.01 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) 41259 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr6-6423 chr6 90869937 90870147 + 8.01 0.000 Intergenic L1ME4c|LINE|L1 -282970 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr12-3345 chr12 91099057 91099267 + 8.01 0.000 Intergenic Intergenic 12332 NM_002345 4060 Hs.406475 NM_002345 ENSG00000139329 LUM LDC|SLRR2D lumican protein-coding chr20-2887 chr20 62969035 62969245 + 8.01 0.000 3' UTR (NM_022082, exon 13 of 13) 3' UTR (NM_022082, exon 13 of 13) 16431 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr5-8548 chr5 135786397 135786607 + 8.01 0.000 intron (NM_001349335, intron 3 of 10) SATR2|Satellite|Satellite 16573 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr22-1490 chr22 33838636 33838846 + 8.01 0.000 intron (NM_001362953, intron 1 of 14) L3|LINE|CR1 81687 NM_004737 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr9-6768 chr9 24422014 24422224 + 8.01 0.000 Intergenic Intergenic 123557 NM_001271706 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr3-4467 chr3 47684270 47684480 + 8.01 0.000 intron (NM_003074, intron 14 of 27) intron (NM_003074, intron 14 of 27) -22681 NR_145791 109623484 NR_145791 SNORD146 - small nucleolar RNA, C/D box 146 snoRNA chr17-3903 chr17 50971959 50972169 + 8.01 0.000 intron (NM_001130527, intron 28 of 29) AluSq2|SINE|Alu 74814 NM_001251971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr3-4539 chr3 127443790 127444000 + 8.01 0.000 Intergenic Intergenic -53225 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr19-4082 chr19 13436478 13436688 + 8.01 0.000 intron (NM_023035, intron 3 of 46) (ATTC)n|Simple_repeat|Simple_repeat 69877 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr5-3721 chr5 20103655 20103865 + 8.01 0.000 intron (NM_001291956, intron 2 of 14) (AT)n|Simple_repeat|Simple_repeat -115560 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr5-3725 chr5 24872373 24872583 + 8.01 0.000 Intergenic MLT2B3|LTR|ERVL -31895 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA chr13-2093 chr13 75876351 75876561 + 8.01 0.000 promoter-TSS (NR_126373) promoter-TSS (NR_126373) -430 NR_126373 104326189 Hs.671216 NR_126373 ENSG00000223458 LMO7DN-IT1 C13orf45-IT1|TCONS_00021569 LMO7DN intronic transcript 1 ncRNA chr7-4100 chr7 38777226 38777436 + 8.01 0.000 intron (NM_014396, intron 10 of 28) intron (NM_014396, intron 10 of 28) -90242 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chr9-6906 chr9 91590039 91590249 + 8.01 0.000 Intergenic Intergenic -46107 NR_037472 100500821 NR_037472 ENSG00000266855 MIR3910-1 mir-3910-1 microRNA 3910-1 ncRNA chr4-4572 chr4 74993206 74993416 + 8.01 0.000 intron (NM_015393, intron 1 of 3) MLT1F2|LTR|ERVL-MaLR -22949 NR_121617 100507388 Hs.570765 NR_121617 ENSG00000249717 LOC100507388 - uncharacterized LOC100507388 ncRNA chr20-3022 chr20 51563713 51563923 + 8.01 0.000 promoter-TSS (NM_001136021) promoter-TSS (NM_001136021) -979 NM_001136021 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr8-3994 chr8 53652061 53652271 + 8.01 0.000 Intergenic LTR102_Mam|LTR|ERVL -128201 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr10-4427 chr10 68796305 68796515 + 8.01 0.000 Intergenic AluJb|SINE|Alu -31121 NM_001130161 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr6-1185 chr6 142926584 142926794 + 8.01 0.000 intron (NM_006734, intron 1 of 9) CpG 18487 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr8-2180 chr8 105485217 105485427 + 8.01 0.000 intron (NM_001362837, intron 3 of 7) intron (NM_001362837, intron 3 of 7) 165779 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr2-6840 chr2 70029710 70029920 + 8.01 0.000 intron (NR_033872, intron 7 of 10) intron (NR_033872, intron 7 of 10) 57200 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA chr19-6791 chr19 41302139 41302349 + 8.01 0.000 intron (NM_144732, intron 11 of 14) AluSx1|SINE|Alu -7928 NM_052848 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr17-4914 chr17 75266714 75266924 + 8.01 0.000 TTS (NM_015971) TTS (NM_015971) 3426 NM_001242501 57409 Hs.325631 NM_020679 ENSG00000125457 MIF4GD AD023|MIFD|SLIP1 MIF4G domain containing protein-coding chr1-6404 chr1 11052797 11053007 + 8.01 0.000 Intergenic Intergenic -5663 NM_006610 10747 Hs.655645 NM_006610 ENSG00000009724 MASP2 MAP19|MASP-2|MASP1P1|sMAP mannan binding lectin serine peptidase 2 protein-coding chr20-2614 chr20 40666384 40666594 + 8.01 0.000 Intergenic Intergenic 22747 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr5-5701 chr5 165232428 165232638 + 8.01 0.000 Intergenic Intergenic 762254 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr14-4330 chr14 22814828 22815038 + 8.01 0.000 intron (NM_001126105, intron 2 of 10) intron (NM_001126105, intron 2 of 10) 502 NR_040448 9056 Hs.513147 NM_003982 ENSG00000155465 SLC7A7 LAT3|LPI|MOP-2|Y+LAT1|y+LAT-1 solute carrier family 7 member 7 protein-coding chr8-4563 chr8 127168860 127169070 + 8.01 0.000 Intergenic L1MC1|LINE|L1 28662 NR_120364 103021165 Hs.573407 NR_120364 CASC19 CARLO6|CARLo-6|LINC01245 cancer susceptibility 19 ncRNA chr14-2217 chr14 103104357 103104567 + 8.01 0.000 intron (NM_001077594, intron 4 of 10) CpG-7692 4318 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3 like 4 protein-coding chr2-8654 chr2 147251406 147251616 + 8.01 0.000 Intergenic Intergenic -593006 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr13-2824 chr13 104713526 104713736 + 8.01 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -752236 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr5-5776 chr5 173954801 173955011 + 8.01 0.000 intron (NM_001308192, intron 8 of 8) intron (NM_001308192, intron 8 of 8) -34264 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chr19-3537 chr19 44648764 44648974 + 8.01 0.000 intron (NM_001135770, intron 2 of 5) MER113B|DNA|hAT-Charlie 4863 NR_039756 100616355 NR_039756 ENSG00000283673 MIR4531 - microRNA 4531 ncRNA chr14-4176 chr14 81084596 81084806 + 8.01 0.000 intron (NM_001142626, intron 3 of 8) intron (NM_001142626, intron 3 of 8) 118133 NR_003021 677845 Hs.693251 NR_003021 ENSG00000221303 SNORA79 ACA65|SNORA79A small nucleolar RNA, H/ACA box 79 snoRNA chr6-4718 chr6 62746859 62747069 + 8.01 0.000 Intergenic L1MCc|LINE|L1 -460737 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr18-776 chr18 24426865 24427075 + 8.01 0.000 intron (NM_018439, intron 1 of 10) CpG 300 NM_018439 55364 Hs.515317 NM_018439 ENSG00000154059 IMPACT RWDD5 impact RWD domain protein protein-coding chr1-8288 chr1 40841095 40841305 + 8.01 0.000 TTS (NM_172163) TTS (NM_172163) 21163 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr14-3793 chr14 61528666 61528876 + 8.01 0.000 intron (NM_006255, intron 10 of 13) intron (NM_006255, intron 10 of 13) 41423 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr11-6555 chr11 70580190 70580400 + 8.01 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) -50799 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA chr17-7325 chr17 5392634 5392844 + 8.01 0.000 intron (NM_002532, intron 9 of 16) L1ME3B|LINE|L1 -26902 NM_001160244 84268 Hs.462086 NM_032308 ENSG00000129197 RPAIN HRIP|RIP RPA interacting protein protein-coding chr11-4449 chr11 96876032 96876242 + 8.01 0.000 Intergenic Intergenic 367712 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chrX-2022 chrX 16082670 16082880 + 8.01 0.000 Intergenic Intergenic -40790 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr2-6417 chr2 140743868 140744078 + 8.01 0.000 intron (NM_018557, intron 35 of 90) AluSx3|SINE|Alu -157288 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr10-4885 chr10 18216617 18216827 + 8.01 0.000 intron (NM_201593, intron 2 of 13) intron (NM_201593, intron 2 of 13) -44000 NM_000724 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr13-1736 chr13 104609286 104609496 + 8.01 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -856476 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chrX-2844 chrX 139202504 139202714 + 8.01 0.000 intron (NM_001139501, intron 2 of 7) intron (NM_001139501, intron 2 of 7) 2414 NM_001139501 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr3-5342 chr3 135505168 135505378 + 8.01 0.000 Intergenic Intergenic -460455 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr1-6777 chr1 79407746 79407956 + 8.01 0.000 Intergenic AluSz6|SINE|Alu -401121 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr3-5727 chr3 17109111 17109321 + 8.01 0.000 Intergenic L2a|LINE|L2 176020 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr3-9468 chr3 50105531 50105741 + 8.01 0.000 non-coding (NR_036627, exon 9 of 24) non-coding (NR_036627, exon 9 of 24) -4648 NR_045388 100775107 Hs.439480 NR_045388 ENSG00000281691 RBM5-AS1 LUST RBM5 antisense RNA 1 ncRNA chr11-5834 chr11 8608739 8608949 + 8.01 0.000 Intergenic AluJo|SINE|Alu -14616 NM_001352392 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr10-6541 chr10 71079037 71079247 + 8.01 0.000 Intergenic L2|LINE|L2 -133428 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr1-9447 chr1 34519819 34520029 + 8.01 0.000 Intergenic Intergenic 149770 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr4-4846 chr4 110384894 110385104 + 8.01 0.000 Intergenic Intergenic -91156 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr7-3864 chr7 104106092 104106302 + 8.01 0.000 Intergenic Intergenic 101816 NM_002553 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chrX-2604 chrX 106895189 106895399 + 8.01 0.000 Intergenic Intergenic -4870 NM_001171092 9075 Hs.522746 NM_020384 ENSG00000165376 CLDN2 - claudin 2 protein-coding chr17-4825 chr17 57288612 57288822 + 8.01 0.000 intron (NM_001322250, intron 5 of 13) intron (NM_001322250, intron 5 of 13) 31698 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr17-6990 chr17 50353440 50353650 + 8.01 0.000 intron (NR_110010, intron 1 of 9) intron (NR_110010, intron 1 of 9) 7419 NR_110010 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr2-8455 chr2 121472923 121473133 + 8.01 0.000 intron (NM_015282, intron 8 of 38) L1MEc|LINE|L1 -57852 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr20-2100 chr20 24952966 24953176 + 8.01 0.000 intron (NM_003650, intron 1 of 3) intron (NM_003650, intron 1 of 3) 3802 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr10-600 chr10 30349189 30349399 + 8.01 0.000 promoter-TSS (NM_018109) promoter-TSS (NM_018109) 44 NM_018109 55149 Hs.173946 NM_018109 ENSG00000107951 MTPAP PAPD1|SPAX4|TENT6 mitochondrial poly(A) polymerase protein-coding chr12-4121 chr12 65882391 65882601 + 8.01 0.000 promoter-TSS (NR_158985) promoter-TSS (NR_158985) -171 NR_158985 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr2-14234 chr2 211275746 211275956 + 8.01 0.000 Intergenic Intergenic 658280 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr1-14173 chr1 32795919 32796129 + 8.01 0.000 intron (NM_003680, intron 5 of 12) AluSx1|SINE|Alu -21418 NM_001256121 64766 Hs.440880 NM_022753 ENSG00000116497 S100PBP S100PBPR S100P binding protein protein-coding chr13-2505 chr13 54150870 54151080 + 8.01 0.000 Intergenic Intergenic -18104 NR_108062 100507428 Hs.351262 NR_108062 ENSG00000234787 LINC00458 LncRNA-ES3 long intergenic non-protein coding RNA 458 ncRNA chr14-5177 chr14 92345399 92345609 + 8.01 0.000 intron (NM_153647, intron 3 of 17) AluSz|SINE|Alu 21696 NM_153646 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr10-5620 chr10 94965592 94965802 + 8.01 0.000 intron (NM_000771, intron 5 of 8) L1MB3|LINE|L1 27039 NM_000771 1559 Hs.282624 NM_000771 ENSG00000138109 CYP2C9 CPC9|CYP2C|CYP2C10|CYPIIC9|P450IIC9 cytochrome P450 family 2 subfamily C member 9 protein-coding chr2-13834 chr2 176406296 176406506 + 8.01 0.000 Intergenic Intergenic 136959 NM_001006635 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr7-4640 chr7 30116951 30117161 + 8.01 0.000 intron (NM_001350973, intron 13 of 13) intron (NM_001350973, intron 13 of 13) -17930 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr8-4437 chr8 111419985 111420195 + 8.01 0.000 intron (NR_146282, intron 2 of 3) L1M2|LINE|L1 43451 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr12-7091 chr12 44301190 44301400 + 8.01 0.000 intron (NM_001286211, intron 6 of 6) intron (NM_001286211, intron 6 of 6) 465214 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr1-11550 chr1 174143801 174144011 + 8.01 0.000 intron (NR_121197, intron 3 of 3) L1PA7|LINE|L1 15381 NR_121197 102724601 Hs.563791 NR_121197 ENSG00000227373 RABGAP1L-DT - RABGAP1L divergent transcript ncRNA chr10-8266 chr10 75836391 75836601 + 8.01 0.000 intron (NM_032024, intron 1 of 5) intron (NM_032024, intron 1 of 5) 53735 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr16-4742 chr16 84483949 84484159 + 8.01 0.000 intron (NM_020947, intron 5 of 7) intron (NM_020947, intron 5 of 7) -16693 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr1-6843 chr1 101176022 101176232 + 8.01 0.000 Intergenic Intergenic 60401 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr17-8522 chr17 79303235 79303445 + 8.01 0.000 intron (NM_001082575, intron 3 of 14) intron (NM_001082575, intron 3 of 14) 212808 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-12519 chr1 23102136 23102346 + 8.01 0.000 intron (NM_001142546, intron 2 of 3) intron (NM_001142546, intron 2 of 3) 57936 NR_036057 100422866 NR_036057 ENSG00000263793 MIR3115 mir-3115 microRNA 3115 ncRNA chr4-3403 chr4 48162083 48162293 + 8.01 0.000 intron (NM_003215, intron 8 of 17) intron (NM_003215, intron 8 of 17) -27938 NM_003328 7294 Hs.479669 NM_003328 ENSG00000074966 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding chrX-4844 chrX 103526080 103526290 + 8.01 0.000 Intergenic Intergenic -6696 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chr1-14189 chr1 33708830 33709040 + 8.01 0.000 intron (NM_052896, intron 22 of 69) intron (NM_052896, intron 22 of 69) -151540 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding chr16-5983 chr16 5058720 5058930 + 8.01 0.000 intron (NM_001098514, intron 3 of 7) intron (NM_001098514, intron 3 of 7) 7320 NM_001098514 146556 Hs.11782 NM_152459 ENSG00000153446 C16orf89 - chromosome 16 open reading frame 89 protein-coding chr20-1930 chr20 14477277 14477487 + 8.01 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) -77002 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA chrX-2792 chrX 133318395 133318605 + 8.01 0.000 intron (NM_001448, intron 3 of 8) intron (NM_001448, intron 3 of 8) 96989 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr1-12063 chr1 119482684 119482894 + 8.01 0.000 Intergenic Intergenic -24414 NM_001328615 3283 Hs.364941 NM_000862 ENSG00000203857 HSD3B1 3BETAHSD|HSD3B|HSDB3|HSDB3A|SDR11E1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 protein-coding chr7-8246 chr7 35572895 35573105 + 8.01 0.000 Intergenic Intergenic 122135 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding chr9-4849 chr9 685708 685918 + 8.01 0.000 promoter-TSS (NM_001354336) promoter-TSS (NM_001354336) -954 NM_001354335 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr1-7696 chr1 22659167 22659377 + 8.01 0.000 intron (NM_001371184, intron 2 of 3) (GGAT)n|Simple_repeat|Simple_repeat 6036 NM_000491 713 Hs.8986 NM_000491 ENSG00000173369 C1QB - complement C1q B chain protein-coding chr1-9443 chr1 34411386 34411596 + 8.01 0.000 Intergenic AluJo|SINE|Alu 234584 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chrX-1990 chrX 12814608 12814818 + 8.01 0.000 intron (NM_001039091, intron 4 of 6) intron (NM_001039091, intron 4 of 6) 23358 NM_001039091 5634 Hs.654581 NM_002765 ENSG00000101911 PRPS2 PRSII phosphoribosyl pyrophosphate synthetase 2 protein-coding chr2-4739 chr2 3144996 3145206 + 8.01 0.000 Intergenic Intergenic -19075 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr13-2363 chr13 38692325 38692535 + 8.01 0.000 exon (NM_207361, exon 1 of 24) exon (NM_207361, exon 1 of 24) 5353 NM_207361 341640 Hs.253994 NM_207361 ENSG00000150893 FREM2 CRYPTOP|FRASRS2 FRAS1 related extracellular matrix 2 protein-coding chr10-9173 chr10 129945145 129945355 + 8.01 0.000 intron (NM_001005463, intron 6 of 15) intron (NM_001005463, intron 6 of 15) 19024 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr16-4200 chr16 11718559 11718769 + 8.01 0.000 intron (NM_001303447, intron 5 of 12) intron (NM_001303447, intron 5 of 12) 24193 NM_001324022 51061 Hs.313847 NM_015914 ENSG00000153066 TXNDC11 EFP1 thioredoxin domain containing 11 protein-coding chr8-3508 chr8 110928771 110928981 + 8.01 0.000 Intergenic LTR22C0|LTR|ERVK 98557 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr12-7792 chr12 97408009 97408219 + 8.01 0.000 Intergenic Intergenic -54662 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr17-7173 chr17 79722417 79722627 + 8.01 0.000 Intergenic Intergenic -8421 NM_178543 339221 Hs.114084 NM_178543 ENSG00000182156 ENPP7 ALK-SMase|E-NPP 7|NPP-7|NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 protein-coding chr11-5969 chr11 18178675 18178885 + 8.01 0.000 Intergenic Intergenic 5943 NM_054032 117196 Hs.632138 NM_054032 ENSG00000179817 MRGPRX4 GPCR|MRGX4|SNSR6 MAS related GPR family member X4 protein-coding chr2-14482 chr2 225622153 225622363 + 8.01 0.000 intron (NM_001371273, intron 5 of 7) AluJb|SINE|Alu 221372 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr1-2866 chr1 183149294 183149504 + 8.01 0.000 Intergenic Intergenic -8129 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr11-9782 chr11 69715531 69715741 + 8.01 0.000 Intergenic MIRc|SINE|MIR -11614 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr7-6941 chr7 91428784 91428994 + 8.01 0.000 Intergenic L1ME3A|LINE|L1 164456 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr15-3779 chr15 67745328 67745538 + 8.01 0.000 intron (NM_001206804, intron 17 of 21) intron (NM_001206804, intron 17 of 21) -80076 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr15-1400 chr15 41572182 41572392 + 8.01 0.000 intron (NM_001330264, intron 14 of 18) intron (NM_001330264, intron 14 of 18) 12315 NM_001330264 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr1-6514 chr1 25809669 25809879 + 8.01 0.000 exon (NM_206926, exon 6 of 12) exon (NM_206926, exon 6 of 12) 9581 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr12-3672 chr12 123765317 123765527 + 8.01 0.000 intron (NM_207437, intron 1 of 77) L1ME3G|LINE|L1 2927 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr10-8204 chr10 72335121 72335331 + 8.01 0.000 3' UTR (NM_001002762, exon 8 of 8) 3' UTR (NM_001002762, exon 8 of 8) 19693 NM_001365081 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr9-4981 chr9 19769948 19770158 + 8.01 0.000 intron (NM_020344, intron 1 of 9) intron (NM_020344, intron 1 of 9) 16966 NM_001193288 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr6-7624 chr6 78601443 78601653 + 8.01 0.000 Intergenic Intergenic -62239 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr3-9949 chr3 93956591 93956801 + 8.01 0.000 intron (NM_001314077, intron 1 of 15) intron (NM_001314077, intron 1 of 15) 17385 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr6-2523 chr6 2498013 2498223 + 8.01 0.000 Intergenic Intergenic -136382 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr12-6422 chr12 80707975 80708185 + 8.01 0.000 exon (NM_002469, exon 1 of 3) exon (NM_002469, exon 1 of 3) 446 NM_002469 4618 Hs.35937 NM_002469 ENSG00000111046 MYF6 CNM3|MRF4|bHLHc4|myf-6 myogenic factor 6 protein-coding chr9-8926 chr9 137155047 137155257 + 8.01 0.000 intron (NM_001185091, intron 5 of 19) intron (NM_001185091, intron 5 of 19) 14118 NR_037416 100500811 NR_037416 ENSG00000263697 MIR3621 - microRNA 3621 ncRNA chr16-5311 chr16 71991350 71991560 + 8.01 0.000 intron (NM_181536, intron 3 of 29) L1M6|LINE|L1 8523 NM_181536 342372 Hs.675286 NM_181536 ENSG00000277481 PKD1L3 - polycystin 1 like 3, transient receptor potential channel interacting protein-coding chr1-16407 chr1 225100417 225100627 + 8.01 0.000 intron (NM_001367479, intron 22 of 85) intron (NM_001367479, intron 22 of 85) 170847 NM_001367481 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chrX-5278 chrX 140232497 140232707 + 8.01 0.000 Intergenic L1MA3|LINE|L1 140935 NM_001271560 389895 Hs.127679 NM_001271560 LOC389895 - chromosome 16 open reading frame 72-like protein-coding chr10-7529 chr10 14501999 14502209 + 8.01 0.000 Intergenic Intergenic 30610 NM_001320741 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr2-5393 chr2 104805679 104805889 + 8.01 0.000 non-coding (NR_037883, exon 4 of 4) non-coding (NR_037883, exon 4 of 4) 45692 NR_037883 100506421 Hs.437281 NR_037883 ENSG00000233639 PANTR1 LINC01158|linc-Brn1a|linc-POU3F3 POU3F3 adjacent non-coding transcript 1 ncRNA chr19-5111 chr19 56946512 56946722 + 8.01 0.000 Intergenic L1ME1|LINE|L1 105715 NR_024059 100073347 Hs.467337 NR_024059 ENSG00000268654 MIMT1 LINC00067|MIM1|NCRNA00067 MER1 repeat containing imprinted transcript 1 ncRNA chr19-4668 chr19 16985480 16985690 + 8.01 0.000 intron (NM_015692, intron 13 of 41) (GATG)n|Simple_repeat|Simple_repeat 41225 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr10-5448 chr10 78687634 78687844 + 8.01 0.000 Intergenic Intergenic 379709 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr17-5596 chr17 47987426 47987636 + 8.01 0.000 Intergenic Intergenic 16418 NM_176096 80279 Hs.20157 NM_025197 ENSG00000108465 CDK5RAP3 C53|HSF-27|IC53|LZAP|MST016|OK/SW-cl.114|PP1553 CDK5 regulatory subunit associated protein 3 protein-coding chr17-7386 chr17 7952923 7953133 + 8.01 0.000 Intergenic Intergenic 20822 NM_001353205 116840 Hs.348012 NM_053051 ENSG00000170037 CNTROB LIP8|PP1221 centrobin, centriole duplication and spindle assembly protein protein-coding chr9-5451 chr9 98069683 98069893 + 8.01 0.000 intron (NM_018946, intron 2 of 5) L1MD2|LINE|L1 13056 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr2-12904 chr2 99560602 99560812 + 8.01 0.000 intron (NM_001025108, intron 19 of 23) intron (NM_001025108, intron 19 of 23) -70690 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chrX-3713 chrX 116016928 116017138 + 8.01 0.000 Intergenic Intergenic -47922 NR_130730 642776 Hs.634316 NR_130730 ENSG00000235244 DANT2 - DXZ4 associated non-coding transcript 2, distal ncRNA chr6-6188 chr6 12020240 12020450 + 8.01 0.000 intron (NM_002114, intron 2 of 8) intron (NM_002114, intron 2 of 8) 8033 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr5-7107 chr5 181234022 181234232 + 8.01 0.000 intron (NM_201627, intron 5 of 7) intron (NM_201627, intron 5 of 7) 7762 NR_002592 619571 NR_002592 ENSG00000272296 SNORD96A U96A small nucleolar RNA, C/D box 96A snoRNA chr18-2951 chr18 21706956 21707166 + 8.01 0.000 Intergenic LTR12C|LTR|ERV1 -2287 NM_138340 171586 Hs.397978 NM_138340 ENSG00000158201 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding chr3-2126 chr3 71432228 71432438 + 8.01 0.000 intron (NR_146142, intron 3 of 19) intron (NR_146142, intron 3 of 19) 109756 NR_031697 100302112 NR_031697 ENSG00000221264 MIR1284 MIRN1284|hsa-mir-1284|mir-1284 microRNA 1284 ncRNA chr3-6547 chr3 119704945 119705155 + 8.01 0.000 intron (NM_001320316, intron 1 of 17) Tigger3a|DNA|TcMar-Tigger 2028 NM_001320318 89876 Hs.341906 NM_033364 ENSG00000183833 MAATS1 AAT1|AAT1alpha|C3orf15|CFAP91|CaM-IP2|SPATA26 MYCBP associated and testis expressed 1 protein-coding chr21-1694 chr21 29531448 29531658 + 8.01 0.000 Intergenic Intergenic 35506 NR_146594 54147 Hs.124532 NR_146594 ENSG00000234293 BACH1-IT3 C21orf8|NCRNA00097 BACH1 intronic transcript 3 ncRNA chr3-6672 chr3 130405290 130405500 + 8.01 0.000 intron (NM_001278298, intron 13 of 40) intron (NM_001278298, intron 13 of 40) 59879 NR_022012 256076 Hs.205403 NM_153264 ENSG00000172752 COL6A5 COL29A1|VWA4 collagen type VI alpha 5 chain protein-coding chr16-2639 chr16 23504572 23504782 + 8.01 0.000 intron (NM_015044, intron 1 of 16) intron (NM_015044, intron 1 of 16) 5817 NM_015044 23062 Hs.460336 NM_015044 ENSG00000103365 GGA2 VEAR golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding chr9-7685 chr9 71110346 71110556 + 8.01 0.000 intron (NM_001366143, intron 1 of 25) MER58B|DNA|hAT-Charlie 11170 NM_001366148 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr3-6555 chr3 121077869 121078079 + 8.01 0.000 intron (NR_145517, intron 5 of 8) LTR12C|LTR|ERV1 28334 NR_049861 100847043 NR_049861 ENSG00000264477 MIR5682 - microRNA 5682 ncRNA chr7-6897 chr7 72262234 72262444 + 8.01 0.000 intron (NM_001363460, intron 2 of 5) intron (NM_001363460, intron 2 of 5) 75052 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr2-7417 chr2 9694797 9695007 + 8.01 0.000 Intergenic Intergenic -63905 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr12-6441 chr12 89274654 89274864 + 8.01 0.000 Intergenic MIRc|SINE|MIR 77742 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr5-7491 chr5 34857079 34857289 + 8.01 0.000 intron (NM_001317949, intron 4 of 10) intron (NM_001317949, intron 4 of 10) 17803 NM_001317949 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding chr1-11784 chr1 23674250 23674460 + 8.01 0.000 Intergenic Intergenic -17424 NM_001199802 6135 Hs.719951 NM_000975 ENSG00000142676 RPL11 DBA7|GIG34|L11|uL5 ribosomal protein L11 protein-coding chr3-7393 chr3 86938785 86938995 + 8.01 0.000 3' UTR (NM_016206, exon 4 of 4) 3' UTR (NM_016206, exon 4 of 4) 52259 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr17-5419 chr17 34790400 34790610 + 8.01 0.000 Intergenic MER20B|DNA|hAT-Charlie 170955 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr17-5074 chr17 3970657 3970867 + 8.01 0.000 Intergenic L2c|LINE|L2 -6298 NM_174956 489 Hs.513870 NM_005173 ENSG00000074370 ATP2A3 SERCA3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 protein-coding chr6-3813 chr6 34174594 34174804 + 8.01 0.000 Intergenic L1M1|LINE|L1 -19077 NM_001256809 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr8-5705 chr8 126782847 126783057 + 8.01 0.000 Intergenic Intergenic -224474 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chrX-1029 chrX 73214027 73214237 + 8.01 0.000 exon (NM_021963, exon 1 of 1) exon (NM_021963, exon 1 of 1) 719 NM_021963 4674 Hs.66180 NM_021963 ENSG00000186462 NAP1L2 BPX nucleosome assembly protein 1 like 2 protein-coding chr2-8910 chr2 180969340 180969550 + 8.01 0.000 Intergenic Intergenic -10940 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr7-4767 chr7 75847805 75848015 + 8.01 0.000 Intergenic Intergenic -24538 NM_001371193 chr6-3622 chr6 113049298 113049508 + 8.01 0.000 Intergenic Intergenic 384044 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr2-11170 chr2 149792216 149792426 + 8.01 0.000 intron (NR_145421, intron 3 of 4) L1PA5|LINE|L1 66870 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr8-5251 chr8 132054135 132054345 + 8.01 0.000 intron (NM_001080399, intron 2 of 13) LTR16B2|LTR|ERVL 5142 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr8-5133 chr8 70916357 70916567 + 8.01 0.000 Intergenic L1ME3A|LINE|L1 247123 NM_001287259 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr7-5590 chr7 48758413 48758623 + 8.01 0.000 Intergenic Intergenic -166029 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr6-2394 chr6 147431217 147431427 + 8.01 0.000 Intergenic MER5B|DNA|hAT-Charlie -77368 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr17-3522 chr17 65531734 65531944 + 8.01 0.000 intron (NM_001363813, intron 9 of 9) intron (NM_001363813, intron 9 of 9) 29809 NM_001363813 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr8-7310 chr8 132865477 132865687 + 8.01 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -1376 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr1-14656 chr1 58927172 58927382 + 8.01 0.000 Intergenic Intergenic -93199 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr16-3610 chr16 81837853 81838063 + 8.01 0.000 intron (NM_002661, intron 2 of 32) L1MD2|LINE|L1 58667 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr6-2571 chr6 47134730 47134940 + 8.01 0.000 Intergenic Intergenic -92503 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr2-11311 chr2 197086649 197086859 + 8.01 0.000 intron (NM_001367496, intron 12 of 27) intron (NM_001367496, intron 12 of 27) -111237 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr8-5741 chr8 139614272 139614482 + 8.01 0.000 intron (NR_104210, intron 2 of 3) intron (NR_104210, intron 2 of 3) 88746 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr9-7410 chr9 21246614 21246824 + 8.01 0.000 Intergenic L1MA5A|LINE|L1 -6714 NM_002172 3448 Hs.93907 NM_002172 ENSG00000228083 IFNA14 IFN-alphaH|LEIF2H interferon alpha 14 protein-coding chr8-4218 chr8 86176067 86176277 + 8.01 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 54209 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr10-936 chr10 13100184 13100394 + 8.01 0.000 promoter-TSS (NM_001282658) promoter-TSS (NM_001282658) 126 NM_001008212 10133 Hs.332706 NM_021980 ENSG00000123240 OPTN ALS12|FIP2|GLC1E|HIP7|HYPL|NRP|TFIIIA-INTP optineurin protein-coding chr1-13331 chr1 244113247 244113457 + 8.01 0.000 Intergenic AluSx1|SINE|Alu 60147 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chrX-4282 chrX 42028372 42028582 + 8.01 0.000 Intergenic Intergenic -104923 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr15-3442 chr15 91085748 91085958 + 8.01 0.000 Intergenic MIR3|SINE|MIR -13735 NM_001323031 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr7-4721 chr7 50667865 50668075 + 8.01 0.000 intron (NM_001350816, intron 6 of 17) intron (NM_001350816, intron 6 of 17) 37331 NM_001001550 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr13-1432 chr13 45482605 45482815 + 8.01 0.000 intron (NM_031431, intron 6 of 22) intron (NM_031431, intron 6 of 22) 17771 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chr8-6845 chr8 98705601 98705811 + 8.01 0.000 intron (NM_001256313, intron 4 of 8) intron (NM_001256313, intron 4 of 8) 119965 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr22-2246 chr22 27686741 27686951 + 8.01 0.000 Intergenic MIRb|SINE|MIR 114910 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr10-8794 chr10 107041276 107041486 + 8.01 0.000 intron (NM_001206569, intron 1 of 25) intron (NM_001206569, intron 1 of 25) 123325 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr5-5348 chr5 131475734 131475944 + 8.01 0.000 intron (NM_016340, intron 16 of 27) intron (NM_016340, intron 16 of 27) 159390 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr19-3682 chr19 16161988 16162198 + 8.01 0.000 intron (NM_054113, intron 5 of 5) L1MA5A|LINE|L1 11432 NM_001300922 117286 Hs.255432 NM_054113 ENSG00000141977 CIB3 KIP3 calcium and integrin binding family member 3 protein-coding chr9-3170 chr9 121320203 121320413 + 8.01 0.000 intron (NM_000177, intron 9 of 16) intron (NM_000177, intron 9 of 16) 20477 NM_000177 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr18-2060 chr18 47788218 47788428 + 8.01 0.000 Intergenic MER113|DNA|hAT-Charlie 142336 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr7-8399 chr7 45455536 45455746 + 8.01 0.000 Intergenic MER115|DNA|hAT-Tip100 -118499 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr13-1857 chr13 113418763 113418973 + 8.01 0.000 Intergenic Intergenic -4475 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr14-4815 chr14 68016421 68016631 + 8.01 0.000 intron (NM_133509, intron 7 of 10) MER63B|DNA|hAT-Blackjack 192934 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr13-1557 chr13 32206129 32206339 + 8.01 0.000 intron (NM_023037, intron 31 of 60) L2c|LINE|L2 105720 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr21-691 chr21 26513240 26513450 + 8.01 0.000 intron (NR_135516, intron 3 of 3) intron (NR_135516, intron 3 of 3) 59941 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr15-4400 chr15 43353642 43353852 + 8.01 0.000 3' UTR (NM_001159280, exon 12 of 12) 3' UTR (NM_001159280, exon 12 of 12) 16313 NM_152455 146050 Hs.418287 NM_152455 ENSG00000140265 ZSCAN29 ZNF690|Zfp690 zinc finger and SCAN domain containing 29 protein-coding chr21-1158 chr21 41491064 41491274 + 8.01 0.000 intron (NM_001135099, intron 3 of 13) AluJb|SINE|Alu 16896 NM_001135099 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr7-5866 chr7 91079607 91079817 + 8.01 0.000 intron (NM_012395, intron 11 of 13) intron (NM_012395, intron 11 of 13) -184721 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr12-7273 chr12 52502383 52502593 + 8.01 0.000 Intergenic L1MC1|LINE|L1 -9231 NM_005554 3853 Hs.700779 NM_005554 ENSG00000205420 KRT6A CK-6C|CK-6E|CK6A|CK6C|CK6D|K6A|K6C|K6D|KRT6C|KRT6D|PC3 keratin 6A protein-coding chr2-9059 chr2 200908454 200908664 + 8.01 0.000 TTS (NM_006190) TTS (NM_006190) 16641 NM_001142356 60491 Hs.145284 NM_021824 ENSG00000196290 NIF3L1 ALS2CR1|CALS-7|MDS015 NGG1 interacting factor 3 like 1 protein-coding chr10-4525 chr10 92727462 92727672 + 8.01 0.000 Intergenic Intergenic 37612 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr2-14421 chr2 221824390 221824600 + 8.01 0.000 Intergenic Intergenic -250293 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr6-2562 chr6 42048742 42048952 + 8.01 0.000 promoter-TSS (NM_001136017) promoter-TSS (NM_001136017) 47 NM_001136126 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr3-4278 chr3 152578744 152578954 + 8.01 0.000 Intergenic Intergenic -237859 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chrX-1671 chrX 153772188 153772398 + 8.01 0.000 intron (NM_001163257, intron 17 of 36) intron (NM_001163257, intron 17 of 36) 8044 NM_005393 5365 Hs.632833 NM_005393 ENSG00000198753 PLXNB3 PLEXB3|PLEXR|PLXN6 plexin B3 protein-coding chr2-13743 chr2 168950133 168950343 + 8.01 0.000 intron (NM_003742, intron 19 of 27) MLT2A1|LTR|ERVL 48947 NM_021176 57818 Hs.283963 NM_021176 ENSG00000152254 G6PC2 IGRP glucose-6-phosphatase catalytic subunit 2 protein-coding chr15-3290 chr15 77792114 77792324 + 8.01 0.000 intron (NM_001301186, intron 2 of 5) L2a|LINE|L2 -5170 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr11-9935 chr11 76175942 76176152 + 8.01 0.000 Intergenic Intergenic 30455 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr2-10579 chr2 240846998 240847208 + 8.01 0.000 Intergenic LTR49|LTR|ERV1 -21721 NM_000030 189 Hs.144567 NM_000030 ENSG00000172482 AGXT AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6 alanine--glyoxylate and serine--pyruvate aminotransferase protein-coding chr2-12958 chr2 102754856 102755066 + 8.01 0.000 intron (NM_001321346, intron 1 of 3) intron (NM_001321346, intron 1 of 3) -7070 NM_144632 130827 Hs.436203 NM_144632 ENSG00000170417 TMEM182 - transmembrane protein 182 protein-coding chr22-2028 chr22 39119770 39119980 + 8.01 0.000 Intergenic (CTTT)n|Simple_repeat|Simple_repeat 22631 NM_001166002 164668 Hs.440515 NM_181773 ENSG00000100298 APOBEC3H A3H|ARP-10|ARP10 apolipoprotein B mRNA editing enzyme catalytic subunit 3H protein-coding chr11-9577 chr11 64980700 64980910 + 8.01 0.000 Intergenic L2a|LINE|L2 -8697 NM_001037225 283129 Hs.567793 NM_001037225 ENSG00000168070 MAJIN C11orf85 membrane anchored junction protein protein-coding chr1-11038 chr1 223175125 223175335 + 8.01 0.000 Intergenic MER77|LTR|ERVL -31982 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr3-10559 chr3 141108852 141109062 + 8.01 0.000 intron (NM_080862, intron 2 of 2) L2c|LINE|L2 57610 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chrX-4161 chrX 31499166 31499376 + 8.01 0.000 intron (NM_000109, intron 56 of 78) intron (NM_000109, intron 56 of 78) 9027 NM_004014 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-7038 chr3 172931765 172931975 + 8.01 0.000 intron (NM_031955, intron 6 of 10) intron (NM_031955, intron 6 of 10) 180868 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr3-4271 chr3 152120668 152120878 + 8.01 0.000 Intergenic Intergenic 84656 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr11-6500 chr11 68560501 68560711 + 8.01 0.000 intron (NR_147971, intron 9 of 24) L1MC|LINE|L1 99854 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr20-1927 chr20 12381733 12381943 + 8.01 0.000 Intergenic Intergenic 463945 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr18-2852 chr18 8415620 8415830 + 8.01 0.000 Intergenic Intergenic -48691 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr7-4978 chr7 151797680 151797890 + 8.01 0.000 intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -8553 NM_001354885 644090 Hs.647065 NM_001354885 LOC644090 - uncharacterized LOC644090 protein-coding chr19-6512 chr19 18334091 18334301 + 8.01 0.000 Intergenic MER1B|DNA|hAT-Charlie -6402 NM_001329476 54858 Hs.131776 NM_017712 ENSG00000130517 PGPEP1 PAP-I|PGI|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding chr11-6996 chr11 117094831 117095041 + 8.01 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 3492 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr9-6505 chr9 100184283 100184493 + 8.01 0.000 intron (NR_134606, intron 3 of 16) intron (NR_134606, intron 3 of 16) 85145 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding chr10-5608 chr10 93808591 93808801 + 8.01 0.000 Intergenic Intergenic 50760 NM_005097 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chrX-3897 chrX 7840496 7840706 + 8.01 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -1661 NM_013452 26609 Hs.278906 NM_013452 ENSG00000182583 VCX VCX-10r|VCX-B1|VCX1|VCX10R|VCXB1 variable charge X-linked protein-coding chr3-5864 chr3 34299459 34299669 + 8.01 0.000 Intergenic Intergenic 500934 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr14-3376 chr14 92776973 92777183 + 8.01 0.000 Intergenic LTR16A1|LTR|ERVL -17227 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr12-6848 chr12 15226953 15227163 + 8.01 0.000 Intergenic L1MEg|LINE|L1 -5641 NM_001190726 85004 Hs.199487 NM_032918 ENSG00000134533 RERG - RAS like estrogen regulated growth inhibitor protein-coding chr16-6874 chr16 84138641 84138851 + 8.01 0.000 intron (NM_031463, intron 1 of 5) intron (NM_031463, intron 1 of 5) 6431 NM_031463 83693 Hs.555992 NM_031463 ENSG00000103160 HSDL1 SDR12C3 hydroxysteroid dehydrogenase like 1 protein-coding chr20-4339 chr20 53926632 53926842 + 8.01 0.000 Intergenic Intergenic -51028 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr4-8234 chr4 138844978 138845188 + 8.01 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 167563 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr5-4318 chr5 154181611 154181821 + 8.01 0.000 Intergenic Intergenic -9017 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr22-2480 chr22 21052023 21052233 + 8.01 0.000 intron (NR_027006, intron 4 of 10) L2b|LINE|L2 6182 NR_110991 400891 Hs.291198 NM_001013675 ENSG00000187905 LRRC74B - leucine rich repeat containing 74B protein-coding chr3-8615 chr3 168484548 168484758 + 8.01 0.000 intron (NR_021485, intron 3 of 15) intron (NR_021485, intron 3 of 15) -67201 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr3-3399 chr3 68007898 68008108 + 8.01 0.000 intron (NM_001252216, intron 2 of 4) CpG 3756 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr12-6200 chr12 22255185 22255395 + 8.01 0.000 exon (NM_003034, exon 3 of 5) exon (NM_003034, exon 3 of 5) 79424 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr4-3500 chr4 142815823 142816033 + 8.01 0.000 intron (NM_001331040, intron 1 of 25) intron (NM_001331040, intron 1 of 25) 30607 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr20-4161 chr20 44363559 44363769 + 8.01 0.000 intron (NM_175914, intron 1 of 9) MIRc|SINE|MIR 7863 NM_175914 3172 Hs.116462 NM_000457 ENSG00000101076 HNF4A FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14 hepatocyte nuclear factor 4 alpha protein-coding chr16-6192 chr16 26902808 26903018 + 8.01 0.000 Intergenic Intergenic -164014 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr9-5811 chr9 129194548 129194758 + 8.01 0.000 Intergenic Intergenic -16392 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr10-4163 chr10 90675052 90675262 + 8.01 0.000 Intergenic Intergenic -134352 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr17-5700 chr17 54049504 54049714 + 8.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR 226682 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr7-6930 chr7 82249055 82249265 + 8.01 0.000 intron (NM_000722, intron 3 of 38) intron (NM_000722, intron 3 of 38) 194617 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr4-5632 chr4 6381216 6381426 + 8.01 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) 547 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr5-7878 chr5 73437511 73437721 + 8.01 0.000 Intergenic CpG 11161 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr19-6722 chr19 37948291 37948501 + 8.01 0.000 intron (NM_015073, intron 1 of 21) AluJb|SINE|Alu 41188 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr13-2730 chr13 95298431 95298641 + 8.01 0.000 intron (NM_001105515, intron 1 of 20) MER5A|DNA|hAT-Charlie 2910 NM_005845 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr10-6684 chr10 113920974 113921184 + 8.01 0.000 Intergenic Intergenic 66418 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding chr7-5702 chr7 69932082 69932292 + 8.01 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 333712 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr3-6169 chr3 58979017 58979227 + 8.01 0.000 intron (NR_110820, intron 2 of 2) intron (NR_110820, intron 2 of 2) 70903 NM_198463 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr4-4298 chr4 27009624 27009834 + 8.01 0.000 intron (NM_001169118, intron 11 of 12) intron (NM_001169118, intron 11 of 12) 148888 NM_001169118 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chr2-10178 chr2 91979193 91979403 + 8.01 0.000 Intergenic L1M1|LINE|L1 38165 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo chr1-4091 chr1 226122513 226122723 + 8.01 0.000 Intergenic CpG -25385 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr4-4399 chr4 42481373 42481583 + 8.01 0.000 intron (NM_001105529, intron 24 of 35) MIR3|SINE|MIR 83990 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr3-7638 chr3 27895984 27896194 + 8.01 0.000 Intergenic L1MB5|LINE|L1 -61953 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr22-2687 chr22 37205345 37205555 + 8.01 0.000 3' UTR (NM_001278687, exon 2 of 2) 3' UTR (NM_001278687, exon 2 of 2) 5239 NM_001278687 6753 Hs.225995 NM_001051 ENSG00000278195 SSTR3 SS-3-R|SS3-R|SS3R|SSR-28 somatostatin receptor 3 protein-coding chr1-14071 chr1 29265076 29265286 + 8.01 0.000 intron (NM_133177, intron 7 of 30) L1MD2|LINE|L1 28659 NM_133178 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr6-5101 chr6 119676838 119677048 + 8.01 0.000 intron (NR_134600, intron 2 of 3) intron (NR_134600, intron 2 of 3) 127135 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr1-15495 chr1 155840304 155840514 + 8.01 0.000 intron (NM_032292, intron 2 of 20) MER66-int|LTR|ERV1 16805 NM_032292 54856 Hs.656361 NM_032292 ENSG00000116580 GON4L GON-4|GON4|YARP gon-4 like protein-coding chrX-4067 chrX 20372690 20372900 + 8.01 0.000 Intergenic LTR50|LTR|ERVL -105886 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr3-5448 chr3 178867389 178867599 + 8.01 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -7089 NR_126560 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr3-10535 chr3 139479439 139479649 + 8.01 0.000 intron (NR_121609, intron 3 of 4) intron (NR_121609, intron 3 of 4) -3028 NM_004164 5948 Hs.655516 NM_004164 ENSG00000114113 RBP2 CRABP-II|CRBP2|CRBPII|RBPC2 retinol binding protein 2 protein-coding chr9-5715 chr9 125374279 125374489 + 8.01 0.000 Intergenic Intergenic 112558 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr1-10361 chr1 154897653 154897863 + 8.01 0.000 Intergenic Intergenic -27477 NM_002249 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr12-7529 chr12 69503232 69503442 + 8.01 0.000 intron (NM_001278354, intron 2 of 9) MLT1E3|LTR|ERVL-MaLR -12103 NR_145803 109623461 NR_145803 SNORA113 - small nucleolar RNA, H/ACA box 113 snoRNA chr2-12967 chr2 104171924 104172134 + 8.01 0.000 Intergenic MLT2A2|LTR|ERVL 236303 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr2-14444 chr2 222900394 222900604 + 8.01 0.000 intron (NM_203372, intron 2 of 15) intron (NM_203372, intron 2 of 15) 39463 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chrX-1900 chrX 136636815 136637025 + 8.01 0.000 Intergenic Intergenic -2623 NR_038461 100128420 Hs.152595 NR_038461 ENSG00000233093 LINC00892 - long intergenic non-protein coding RNA 892 ncRNA chr1-12681 chr1 47887727 47887937 + 8.01 0.000 intron (NM_001194986, intron 2 of 6) intron (NM_001194986, intron 2 of 6) 109553 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr2-10374 chr2 172764425 172764635 + 8.01 0.000 intron (NM_007023, intron 1 of 30) intron (NM_007023, intron 1 of 30) -28324 NR_026995 91149 Hs.711021 NR_026995 ENSG00000228016 RAPGEF4-AS1 - RAPGEF4 antisense RNA 1 ncRNA chr19-6465 chr19 17119965 17120175 + 8.01 0.000 intron (NM_001130065, intron 2 of 39) AluJb|SINE|Alu 27835 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chr22-2559 chr22 26975292 26975502 + 8.01 0.000 Intergenic Intergenic 72105 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA chr22-2296 chr22 36977178 36977388 + 8.01 0.000 Intergenic LTR78B|LTR|ERV1 12035 NR_038954 100506241 Hs.640023 NR_038954 ENSG00000215403 LL22NC01-81G9.3 - uncharacterized protein FLJ39582-like ncRNA chr20-1401 chr20 19784713 19784923 + 8.01 0.000 Intergenic Intergenic -101703 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr12-7566 chr12 74478992 74479202 + 8.01 0.000 Intergenic L2a|LINE|L2 -58738 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr1-12301 chr1 239769061 239769271 + 8.01 0.000 intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) -50047 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr3-3355 chr3 27195032 27195242 + 8.01 0.000 intron (NM_001304384, intron 4 of 16) intron (NM_001304384, intron 4 of 16) 21386 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr11-7026 chr11 118418054 118418264 + 8.01 0.000 intron (NR_046370, intron 2 of 3) intron (NR_046370, intron 2 of 3) 656 NR_046370 100131626 Hs.721614 NR_046369 LOC100131626 - uncharacterized LOC100131626 ncRNA chr6-8257 chr6 138545567 138545777 + 8.01 0.000 intron (NM_020464, intron 1 of 6) intron (NM_020464, intron 1 of 6) 26897 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr4-8336 chr4 146370906 146371116 + 8.01 0.000 intron (NM_001317816, intron 4 of 10) L2c|LINE|L2 -37572 NR_107003 102465837 NR_107003 ENSG00000278438 MIR7849 hsa-mir-7849 microRNA 7849 ncRNA chr10-5165 chr10 57188361 57188571 + 8.01 0.000 Intergenic L1MC4|LINE|L1 116093 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr8-4429 chr8 109840625 109840835 + 8.01 0.000 Intergenic Intergenic 135041 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr1-13501 chr1 4637152 4637362 + 8.01 0.000 Intergenic Intergenic -17352 NM_001042478 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr10-6375 chr10 634115 634325 + 8.01 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) 5656 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr17-7354 chr17 6778361 6778571 + 8.01 0.000 intron (NM_153230, intron 1 of 3) MIR3|SINE|MIR 2251 NM_153230 162517 Hs.368364 NM_153230 ENSG00000177294 FBXO39 CT144|Fbx39 F-box protein 39 protein-coding chr13-1873 chr13 27348352 27348562 + 8.01 0.000 Intergenic L2|LINE|L2 -76162 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr11-10005 chr11 79667606 79667816 + 8.01 0.000 Intergenic Intergenic -226681 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr7-9127 chr7 108129021 108129231 + 8.01 0.000 intron (NM_007356, intron 1 of 33) intron (NM_007356, intron 1 of 33) 1235 NM_001318047 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr11-9307 chr11 45667514 45667724 + 8.01 0.000 Intergenic Intergenic -1997 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr2-5962 chr2 45674343 45674553 + 8.01 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 22773 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr22-2084 chr22 19232166 19232376 + 8.01 0.000 intron (NM_007098, intron 10 of 32) intron (NM_007098, intron 10 of 32) -53408 NR_046298 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CMS23|CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr11-6743 chr11 82736750 82736960 + 8.01 0.000 Intergenic MIRb|SINE|MIR -2991 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr2-4026 chr2 104758349 104758559 + 8.01 0.000 promoter-TSS (NR_038231) promoter-TSS (NR_038231) -735 NR_038231 284998 Hs.410180 NR_038231 ENSG00000234177 LINC01114 PANCAT long intergenic non-protein coding RNA 1114 ncRNA chr6-7688 chr6 85917474 85917684 + 8.01 0.000 Intergenic ERVL-E-int|LTR|ERVL -238846 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr22-4083 chr22 43118637 43118847 + 8.01 0.000 intron (NM_001197, intron 1 of 4) intron (NM_001197, intron 1 of 4) 7992 NM_001197 638 Hs.475055 NM_001197 ENSG00000100290 BIK BIP1|BP4|NBK BCL2 interacting killer protein-coding chr12-8266 chr12 124985955 124986165 + 8.01 0.000 intron (NM_032656, intron 2 of 26) intron (NM_032656, intron 2 of 26) 3071 NM_032656 57647 Hs.107382 NM_032656 ENSG00000150990 DHX37 DDX37|Dhr1 DEAH-box helicase 37 protein-coding chr7-5817 chr7 83382039 83382249 + 8.01 0.000 intron (NM_001178129, intron 16 of 16) intron (NM_001178129, intron 16 of 16) -219260 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr6-6015 chr6 110345611 110345821 + 8.01 0.000 intron (NM_001123364, intron 1 of 4) L1PREC2|LINE|L1 12556 NM_001354594 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr4-3145 chr4 178767678 178767888 + 8.01 0.000 Intergenic MER9a1|LTR|ERVK -859847 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr2-6792 chr2 47958585 47958795 + 8.01 0.000 Intergenic L1MA1|LINE|L1 -52897 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr4-2857 chr4 64171466 64171676 + 8.01 0.000 Intergenic Intergenic 237879 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chrX-4092 chrX 23524395 23524605 + 8.01 0.000 Intergenic L1MA2|LINE|L1 -142993 NM_006406 10549 Hs.83383 NM_006406 ENSG00000123131 PRDX4 AOE37-2|AOE372|HEL-S-97n|PRX-4 peroxiredoxin 4 protein-coding chr2-5428 chr2 117020386 117020596 + 8.01 0.000 Intergenic Intergenic -794200 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr15-1846 chr15 50817887 50818097 + 8.01 0.000 Intergenic HAL1b|LINE|L1 -52286 NM_032802 84888 Hs.401537 NM_032802 ENSG00000138600 SPPL2A IMP3|PSL2 signal peptide peptidase like 2A protein-coding chr4-2950 chr4 103032579 103032789 + 8.01 0.000 intron (NM_001370207, intron 9 of 10) LTR41|LTR|ERVL -12979 NM_139173 150159 Hs.666728 NM_139173 ENSG00000164037 SLC9B1 NHA1|NHEDC1 solute carrier family 9 member B1 protein-coding chr8-1345 chr8 90082774 90082984 + 8.01 0.000 promoter-TSS (NM_004929) promoter-TSS (NM_004929) 0 NM_004929 793 Hs.65425 NM_004929 ENSG00000104327 CALB1 CALB|D-28K calbindin 1 protein-coding chr4-3595 chr4 4159438 4159648 + 8.01 0.000 Intergenic SATR1|Satellite|Satellite 67351 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr1-9896 chr1 69552085 69552295 + 8.01 0.000 Intergenic Intergenic -15144 NM_001366839 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr3-5236 chr3 99708531 99708741 + 8.01 0.000 intron (NM_001850, intron 2 of 4) intron (NM_001850, intron 2 of 4) 70042 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr22-2476 chr22 20867878 20868088 + 8.01 0.000 intron (NM_004782, intron 1 of 4) intron (NM_004782, intron 1 of 4) 8976 NM_004782 9342 Hs.108002 NM_004782 ENSG00000099940 SNAP29 CEDNIK|SNAP-29 synaptosome associated protein 29 protein-coding chr3-4943 chr3 8631492 8631702 + 8.01 0.000 intron (NR_046358, intron 6 of 12) L2c|LINE|L2 13201 NR_046358 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr8-2593 chr8 51962948 51963158 + 8.01 0.000 Intergenic L2a|LINE|L2 -63867 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr3-7435 chr3 123099033 123099243 + 8.01 0.000 intron (NM_006810, intron 3 of 16) intron (NM_006810, intron 3 of 16) 32113 NM_006810 10954 Hs.477352 NM_006810 ENSG00000065485 PDIA5 PDIR protein disulfide isomerase family A member 5 protein-coding chr1-15039 chr1 93802417 93802627 + 8.01 0.000 intron (NM_001261408, intron 2 of 13) ERV24B_Prim-int|LTR|ERV1 -27139 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr3-8373 chr3 87833132 87833342 + 8.01 0.000 intron (NM_001322210, intron 2 of 2) intron (NM_001322210, intron 2 of 2) 40531 NM_001322209 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr4-2584 chr4 107068103 107068313 + 8.01 0.000 Intergenic Intergenic -31895 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr1-6299 chr1 1586342 1586552 + 8.01 0.000 Intergenic MER52C|LTR|ERV1 -11584 NM_014188 29101 Hs.30026 NM_014188 ENSG00000160075 SSU72 HSPC182|PNAS-120 SSU72 homolog, RNA polymerase II CTD phosphatase protein-coding chr6-4997 chr6 108493071 108493281 + 8.01 0.000 intron (NM_001323005, intron 10 of 11) L4_A_Mam|LINE|RTE-X -66649 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr1-10278 chr1 147913743 147913953 + 8.01 0.000 Intergenic Intergenic 11053 NM_005267 2703 Hs.632441 NM_005267 ENSG00000121634 GJA8 CAE|CAE1|CTRCT1|CX50|CZP1|MP70 gap junction protein alpha 8 protein-coding chr4-4789 chr4 102552234 102552444 + 8.01 0.000 intron (NM_003998, intron 5 of 23) CR1-3_Croc|LINE|CR1 -49853 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chrX-1920 chrX 152736791 152737001 + 8.01 0.000 exon (NM_001166387, exon 3 of 3) exon (NM_001166387, exon 3 of 3) 3034 NM_001166386 4111 Hs.169246 NM_005367 ENSG00000213401 MAGEA12 CT1.12|MAGE12 MAGE family member A12 protein-coding chr5-2918 chr5 134140665 134140875 + 8.01 0.000 intron (NR_033449, intron 3 of 7) intron (NR_033449, intron 3 of 7) 17152 NM_001366502 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr10-4445 chr10 71270361 71270571 + 8.01 0.000 intron (NM_001244889, intron 1 of 15) L2a|LINE|L2 -48787 NM_001363518 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr10-4336 chr10 28408146 28408356 + 8.01 0.000 Intergenic U3|snRNA|snRNA 87562 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chr6-6406 chr6 83715284 83715494 + 8.01 0.000 intron (NR_136251, intron 1 of 2) MIRc|SINE|MIR 5947 NR_136251 105377879 Hs.736886 NR_136251 LOC105377879 - uncharacterized LOC105377879 ncRNA chr2-10657 chr2 18899719 18899929 + 8.01 0.000 Intergenic Intergenic 127147 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr13-2221 chr13 24359064 24359274 + 8.01 0.000 Intergenic Intergenic 27719 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr5-5966 chr5 116358434 116358644 + 8.01 0.000 Intergenic Intergenic 16031 NR_104675 101927190 Hs.639849 NR_104675 LOC101927190 - uncharacterized LOC101927190 ncRNA chr14-3338 chr14 89365233 89365443 + 8.01 0.000 intron (NM_001085471, intron 2 of 6) intron (NM_001085471, intron 2 of 6) 51895 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr4-4787 chr4 102500669 102500879 + 8.01 0.000 promoter-TSS (NM_001165412) promoter-TSS (NM_001165412) -585 NM_003998 4790 Hs.618430 NM_003998 ENSG00000109320 NFKB1 CVID12|EBP-1|KBF1|NF-kB1|NF-kappa-B1|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor kappa B subunit 1 protein-coding chr5-8154 chr5 102302761 102302971 + 8.01 0.000 Intergenic Intergenic -6582 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr7-8856 chr7 89005328 89005538 + 8.01 0.000 intron (NM_181646, intron 1 of 3) intron (NM_181646, intron 1 of 3) -209696 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr8-6412 chr8 57502729 57502939 + 8.01 0.000 Intergenic Intergenic 159047 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr7-9275 chr7 124809994 124810204 + 8.01 0.000 Intergenic L2|LINE|L2 -19289 NM_001024603 154872 Hs.444163 NM_001024603 ENSG00000275356 C7orf77 - chromosome 7 open reading frame 77 protein-coding chr1-16533 chr1 232196998 232197208 + 8.01 0.000 Intergenic HERVL-int|LTR|ERVL 271269 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr22-2567 chr22 27785229 27785439 + 8.01 0.000 intron (NM_002430, intron 1 of 1) intron (NM_002430, intron 1 of 1) 16422 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr5-3896 chr5 151637768 151637978 + 8.01 0.000 Intergenic Intergenic -39072 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr2-9340 chr2 226040099 226040309 + 8.01 0.000 Intergenic Intergenic -102590 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr12-8021 chr12 113094586 113094796 + 8.01 0.000 intron (NM_004416, intron 5 of 8) intron (NM_004416, intron 5 of 8) 36834 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 RNF140|hDx-1 deltex E3 ubiquitin ligase 1 protein-coding chr10-7046 chr10 81913333 81913543 + 8.01 0.000 intron (NR_163253, intron 2 of 10) AluSx|SINE|Alu 35751 NR_163253 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chrX-4815 chrX 101488177 101488387 + 8.01 0.000 intron (NR_045862, intron 5 of 12) intron (NR_045862, intron 5 of 12) 238 NM_001256155 100131755 Hs.729062 NM_152583 ENSG00000196440 ARMCX4 CXorf35|GASP4 armadillo repeat containing X-linked 4 protein-coding chr18-2782 chr18 2510388 2510598 + 8.01 0.000 Intergenic Intergenic 61012 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr11-6778 chr11 87161776 87161986 + 8.01 0.000 intron (NR_033149, intron 4 of 13) L2a|LINE|L2 123947 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr5-6816 chr5 103459662 103459872 + 8.01 0.000 Intergenic Intergenic 82218 NR_104670 102467212 Hs.641885 NR_104670 ENSG00000248757 LINC02115 - long intergenic non-protein coding RNA 2115 ncRNA chrX-774 chrX 41442197 41442407 + 8.01 0.000 Intergenic CpG -5158 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr19-3030 chr19 55223618 55223828 + 8.01 0.000 Intergenic Intergenic 5541 NM_173804 255043 Hs.135215 NM_173804 ENSG00000180089 TMEM86B - transmembrane protein 86B protein-coding chr7-3972 chr7 134730055 134730265 + 8.01 0.000 Intergenic Intergenic -49474 NM_033157 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr2-7611 chr2 26518509 26518719 + 8.01 0.000 intron (NM_194248, intron 4 of 46) intron (NM_194248, intron 4 of 46) 40142 NM_001287489 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr14-3463 chr14 101131054 101131264 + 8.01 0.000 Intergenic L2a|LINE|L2 10303 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr11-7129 chr11 125534384 125534594 + 8.01 0.000 Intergenic L1MB7|LINE|L1 -34988 NM_001290135 9538 Hs.643514 NM_004879 ENSG00000149547 EI24 EPG4|PIG8|TP53I8 EI24 autophagy associated transmembrane protein protein-coding chr18-2806 chr18 3850923 3851133 + 8.01 0.000 intron (NM_001242761, intron 4 of 11) intron (NM_001242761, intron 4 of 11) -5670 NM_001242766 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr11-3750 chr11 40186867 40187077 + 8.01 0.000 intron (NM_020929, intron 3 of 4) intron (NM_020929, intron 3 of 4) 106158 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr1-5654 chr1 27637073 27637283 + 8.01 0.000 Intergenic L2c|LINE|L2 -1993 NM_005248 2268 Hs.1422 NM_005248 ENSG00000000938 FGR SRC2|c-fgr|c-src2|p55-Fgr|p55c-fgr|p58-Fgr|p58c-fgr FGR proto-oncogene, Src family tyrosine kinase protein-coding chr15-2243 chr15 101379105 101379315 + 8.01 0.000 intron (NM_001291309, intron 9 of 19) intron (NM_001291309, intron 9 of 19) 44773 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr15-4228 chr15 27290727 27290937 + 8.01 0.000 intron (NM_001270873, intron 3 of 5) L1MC3|LINE|L1 -129513 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr1-4216 chr1 148951957 148952167 + 8.01 0.000 promoter-TSS (NM_001350520) promoter-TSS (NM_001350520) -62 NM_001002811 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding chr19-5244 chr19 43780781 43780991 + 8.01 0.000 promoter-TSS (NM_002250) promoter-TSS (NM_002250) 87 NM_002250 3783 Hs.10082 NM_002250 ENSG00000104783 KCNN4 DHS2|IK|IK1|IKCA1|KCA4|KCa3.1|SK4|hIKCa1|hKCa4|hSK4 potassium calcium-activated channel subfamily N member 4 protein-coding chr7-6777 chr7 22363633 22363843 + 8.01 0.000 Intergenic Intergenic -6584 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr13-3983 chr13 64584908 64585118 + 8.01 0.000 Intergenic Intergenic -509002 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr3-5737 chr3 18824045 18824255 + 8.01 0.000 Intergenic MLT1B-int|LTR|ERVL-MaLR -324360 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr20-2047 chr20 4871199 4871409 + 8.01 0.000 intron (NM_005116, intron 11 of 16) intron (NM_005116, intron 11 of 16) -47696 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr3-6409 chr3 99544958 99545168 + 8.01 0.000 Intergenic Intergenic -93531 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr19-5181 chr19 11005727 11005937 + 8.01 0.000 intron (NM_001128845, intron 12 of 32) L1M4a1|LINE|L1 21680 NM_001128848 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr2-5039 chr2 238299863 238300073 + 8.01 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -11358 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr12-8316 chr12 129475778 129475988 + 8.01 0.000 intron (NM_133448, intron 3 of 8) MER20B|DNA|hAT-Charlie 267282 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chr1-11729 chr1 11751437 11751647 + 8.01 0.000 TTS (NM_001040196) TTS (NM_001040196) -10651 NM_001010881 284498 Hs.585415 NM_001010881 C1orf167 - chromosome 1 open reading frame 167 protein-coding chr3-10245 chr3 123314581 123314791 + 8.01 0.000 intron (NM_183357, intron 11 of 20) intron (NM_183357, intron 11 of 20) 101656 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr2-9076 chr2 202491048 202491258 + 8.01 0.000 intron (NM_001204, intron 3 of 12) AluSz6|SINE|Alu 114826 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr20-2527 chr20 35156602 35156812 + 8.01 0.000 intron (NM_001355008, intron 5 of 14) LTR37B|LTR|ERV1 -9371 NR_026728 55741 Hs.720177 NM_018217 ENSG00000088298 EDEM2 C20orf31|C20orf49|bA4204.1 ER degradation enhancing alpha-mannosidase like protein 2 protein-coding chr11-9248 chr11 42481622 42481832 + 8.01 0.000 Intergenic Intergenic -228037 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr9-3510 chr9 27333166 27333376 + 8.01 0.000 intron (NM_024761, intron 3 of 3) intron (NM_024761, intron 3 of 3) -36121 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chr3-6082 chr3 52196761 52196971 + 8.01 0.000 Intergenic Intergenic -1217 NM_199166 211 Hs.476308 NM_000688 ENSG00000023330 ALAS1 ALAS|ALAS-H|ALAS3|ALASH|MIG4 5'-aminolevulinate synthase 1 protein-coding chr14-2182 chr14 98527302 98527512 + 8.01 0.000 Intergenic Intergenic -184206 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chrX-4316 chrX 44884112 44884322 + 8.01 0.000 intron (NR_111960, intron 2 of 27) intron (NR_111960, intron 2 of 27) 11042 NM_001291417 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding chr7-6022 chr7 106931661 106931871 + 8.01 0.000 Intergenic Tigger12c|DNA|TcMar-Tigger 66287 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr18-2132 chr18 54918651 54918861 + 8.01 0.000 intron (NM_001143829, intron 9 of 11) intron (NM_001143829, intron 9 of 11) 39292 NM_001143829 80323 Hs.120790 NM_025214 ENSG00000166510 CCDC68 SE57-1 coiled-coil domain containing 68 protein-coding chr13-1990 chr13 27670642 27670852 + 8.01 0.000 Intergenic L4_C_Mam|LINE|RTE-X 48855 NM_152705 51082 Hs.507584 NM_015972 ENSG00000186184 POLR1D AC19|POLR1C|RPA16|RPA9|RPAC2|RPC16|RPO1-3|TCS2 RNA polymerase I and III subunit D protein-coding chr12-5184 chr12 104561231 104561441 + 8.01 0.000 intron (NM_018413, intron 1 of 2) MLT1J|LTR|ERVL-MaLR -30297 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr15-4248 chr15 33596860 33597070 + 8.01 0.000 intron (NM_001243996, intron 16 of 102) LTR8|LTR|ERV1 285998 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr1-6153 chr1 178684748 178684958 + 8.01 0.000 Intergenic Intergenic 7104 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chr15-4914 chr15 77603640 77603850 + 8.01 0.000 Intergenic MIRb|SINE|MIR 29167 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr11-10220 chr11 98175686 98175896 + 8.01 0.000 Intergenic L1PA15|LINE|L1 -845158 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr17-8603 chr17 80813440 80813650 + 8.01 0.000 intron (NM_020761, intron 7 of 33) intron (NM_020761, intron 7 of 33) -7913 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr14-3130 chr14 67747075 67747285 + 8.01 0.000 3' UTR (NM_015346, exon 42 of 42) 3' UTR (NM_015346, exon 42 of 42) 45294 NM_152443 145226 Hs.415322 NM_152443 ENSG00000139988 RDH12 LCA13|RP53|SDR7C2 retinol dehydrogenase 12 protein-coding chr20-2450 chr20 25859925 25860135 + 8.01 0.000 Intergenic SST1|Satellite|centr -6009 NR_110001 101926935 Hs.737440 NR_110001 LOC101926935 - uncharacterized LOC101926935 ncRNA chr1-16209 chr1 208386198 208386408 + 8.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR -141919 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr1-13474 chr1 3581544 3581754 + 8.01 0.000 intron (NM_001409, intron 3 of 36) intron (NM_001409, intron 3 of 36) -20859 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr18-1710 chr18 2516290 2516500 + 8.01 0.000 Intergenic Intergenic 55110 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr18-2504 chr18 60619618 60619828 + 8.01 0.000 Intergenic Intergenic -246948 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr5-3360 chr5 138011994 138012204 + 8.01 0.000 intron (NM_001101801, intron 3 of 21) intron (NM_001101801, intron 3 of 21) -20675 NR_037900 100130172 Hs.616629 NR_037900 LOC100130172 - uncharacterized LOC100130172 ncRNA chr2-6487 chr2 172707077 172707287 + 8.01 0.000 Intergenic L1MDa|LINE|L1 -28663 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr4-7864 chr4 103205713 103205923 + 8.01 0.000 Intergenic L2|LINE|L2 -7475 NM_001286734 1062 Hs.75573 NM_001813 ENSG00000138778 CENPE CENP-E|KIF10|MCPH13|PPP1R61 centromere protein E protein-coding chr7-9600 chr7 148707836 148708046 + 8.01 0.000 intron (NM_001370664, intron 1 of 21) intron (NM_001370664, intron 1 of 21) 8231 NM_001370664 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr12-2003 chr12 6341837 6342047 + 8.01 0.000 non-coding (NR_144351, exon 1 of 9) non-coding (NR_144351, exon 1 of 9) 134 NM_001346091 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr12-4985 chr12 77941607 77941817 + 8.01 0.000 intron (NM_001024383, intron 3 of 39) intron (NM_001024383, intron 3 of 39) 110818 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr1-10978 chr1 215719027 215719237 + 8.01 0.000 intron (NM_206933, intron 61 of 71) intron (NM_206933, intron 61 of 71) 151828 NM_001319294 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr3-10510 chr3 136984943 136985153 + 8.01 0.000 intron (NM_144717, intron 3 of 6) intron (NM_144717, intron 3 of 6) 27065 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr10-5413 chr10 76811993 76812203 + 8.01 0.000 Intergenic Intergenic -75946 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr22-845 chr22 45890838 45891048 + 8.01 0.000 Intergenic CpG 86219 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr17-3927 chr17 58255801 58256011 + 8.01 0.000 intron (NR_027647, intron 8 of 11) L1MD2|LINE|L1 17322 NM_006151 4025 Hs.234742 NM_006151 ENSG00000167419 LPO SPO lactoperoxidase protein-coding chr15-5151 chr15 91151544 91151754 + 8.01 0.000 intron (NM_001323040, intron 2 of 12) LTR65|LTR|ERV1 49853 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr14-2440 chr14 74350025 74350235 + 8.01 0.000 intron (NM_018228, intron 1 of 1) intron (NM_018228, intron 1 of 1) 1659 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr9-5650 chr9 121922004 121922214 + 8.01 0.000 intron (NM_001139442, intron 6 of 8) intron (NM_001139442, intron 6 of 8) 171497 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr2-11487 chr2 234008105 234008315 + 8.01 0.000 intron (NM_024080, intron 24 of 25) intron (NM_024080, intron 24 of 25) -42492 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr22-2813 chr22 43092240 43092450 + 8.01 0.000 Intergenic Intergenic -2917 NR_027779 25809 Hs.660298 NM_012263 ENSG00000100271 TTLL1 C22orf7|HS323M22B tubulin tyrosine ligase like 1 protein-coding chr2-12688 chr2 76148899 76149109 + 8.01 0.000 Intergenic Intergenic -438089 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr4-8101 chr4 125125272 125125482 + 8.01 0.000 Intergenic Intergenic -191035 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr8-7558 chr8 144970246 144970456 + 8.01 0.000 Intergenic Intergenic -19471 NM_006958 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding chr13-3771 chr13 43953537 43953747 + 8.01 0.000 Intergenic HAL1|LINE|L1 -68693 NR_026955 121838 Hs.201441 NR_026955 LINC00284 NCRNA00284 long intergenic non-protein coding RNA 284 ncRNA chr4-4352 chr4 38469527 38469737 + 8.01 0.000 intron (NR_110951, intron 2 of 7) (CCAGCC)n|Simple_repeat|Simple_repeat -40135 NR_149076 106144599 Hs.582017 NR_149076 ENSG00000249667 LINC01259 TCONS_00007515 long intergenic non-protein coding RNA 1259 ncRNA chr13-2993 chr13 98144995 98145205 + 8.01 0.000 intron (NM_005766, intron 1 of 26) intron (NM_005766, intron 1 of 26) 2006 NM_005766 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, ARH/RhoGEF and pleckstrin domain protein 1 protein-coding chr5-3852 chr5 126901142 126901352 + 8.01 0.000 intron (NM_178450, intron 3 of 4) intron (NM_178450, intron 3 of 4) 124111 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr13-3452 chr13 110196223 110196433 + 8.01 0.000 intron (NM_001845, intron 21 of 51) intron (NM_001845, intron 21 of 51) 74626 NR_148221 105370361 Hs.134728 NR_148221 LOC105370361 - uncharacterized LOC105370361 ncRNA chr19-6542 chr19 18863101 18863311 + 8.01 0.000 intron (NM_002911, intron 18 of 23) intron (NM_002911, intron 18 of 23) 31247 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr9-5761 chr9 127478645 127478855 + 8.01 0.000 intron (NM_001190723, intron 11 of 24) MER5B|DNA|hAT-Charlie 26495 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr13-1493 chr13 112712552 112712762 + 8.01 0.000 intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 22328 NM_032189 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr15-4165 chr15 92340220 92340430 + 8.01 0.000 Intergenic MER115|DNA|hAT-Tip100 -53556 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr22-1047 chr22 40204312 40204522 + 8.01 0.000 intron (NM_015088, intron 1 of 20) intron (NM_015088, intron 1 of 20) 26492 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr15-4476 chr15 50349512 50349722 + 8.01 0.000 non-coding (NR_026891, exon 1 of 1) non-coding (NR_026891, exon 1 of 1) -4557 NR_024490 100129387 Hs.659360 NR_024490 GABPB1-AS1 - GABPB1 antisense RNA 1 ncRNA chr6-7485 chr6 61041664 61041874 + 8.01 0.000 Intergenic SATR1|Satellite|Satellite -532361 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr3-8888 chr3 11291207 11291417 + 8.01 0.000 intron (NM_001349234, intron 2 of 19) intron (NM_001349234, intron 2 of 19) 18915 NM_001349232 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr1-9426 chr1 33153428 33153638 + 8.01 0.000 intron (NM_018207, intron 4 of 4) MER20|DNA|hAT-Charlie 23017 NM_001330483 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr19-4718 chr19 19145298 19145508 + 8.01 0.000 TTS (NM_005919) TTS (NM_005919) -6925 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr11-2901 chr11 62806529 62806739 + 8.01 0.000 TTS (NM_001244666) TTS (NM_001244666) -1194 NM_006362 10482 Hs.523739 NM_006362 ENSG00000162231 NXF1 MEX67|TAP nuclear RNA export factor 1 protein-coding chr22-2232 chr22 24617415 24617625 + 8.01 0.000 intron (NM_013430, intron 7 of 15) L2|LINE|L2 14327 NM_001288833 2678 Hs.595809 NM_005265 ENSG00000100031 GGT1 CD224|D22S672|D22S732|GGT|GGT 1|GGTD|GTG gamma-glutamyltransferase 1 protein-coding chr4-4918 chr4 123555997 123556207 + 8.01 0.000 Intergenic Intergenic -93889 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr17-3686 chr17 14394771 14394981 + 8.01 0.000 Intergenic MIRb|SINE|MIR 91136 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr13-3958 chr13 61500265 61500475 + 8.01 0.000 Intergenic Intergenic -72424 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr20-3009 chr20 47756525 47756735 + 8.01 0.000 intron (NM_198596, intron 2 of 20) intron (NM_198596, intron 2 of 20) 29434 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr11-6122 chr11 38652028 38652238 + 8.01 0.000 intron (NR_120553, intron 1 of 2) intron (NR_120553, intron 1 of 2) 3275 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr15-1807 chr15 99442359 99442569 + 8.01 0.000 Intergenic Intergenic -122953 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr9-8022 chr9 94951271 94951481 + 8.01 0.000 intron (NM_001193329, intron 6 of 15) MIRb|SINE|MIR -5822 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr7-6063 chr7 113958501 113958711 + 8.01 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -39597 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr1-12544 chr1 27383745 27383955 + 8.01 0.000 promoter-TSS (NM_001330448) promoter-TSS (NM_001330448) -517 NM_207397 388611 Hs.664836 NM_207397 ENSG00000174950 CD164L2 EAPG6122|UNQ6122 CD164 molecule like 2 protein-coding chr1-7697 chr1 22674481 22674691 + 8.01 0.000 Intergenic MIR|SINE|MIR 21350 NM_000491 713 Hs.8986 NM_000491 ENSG00000173369 C1QB - complement C1q B chain protein-coding chr10-5654 chr10 97460698 97460908 + 8.01 0.000 intron (NM_001289403, intron 23 of 29) intron (NM_001289403, intron 23 of 29) 14628 NM_198046 84287 Hs.76662 NM_032327 ENSG00000171307 ZDHHC16 APH2|DHHC-16 zinc finger DHHC-type containing 16 protein-coding chr3-10055 chr3 105606117 105606327 + 8.01 0.000 Intergenic HERVL-int|LTR|ERVL 239313 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr7-5104 chr7 3431503 3431713 + 8.01 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 130356 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr20-3918 chr20 32569476 32569686 + 8.01 0.000 intron (NM_001256798, intron 1 of 10) intron (NM_001256798, intron 1 of 10) 15752 NM_001256798 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr14-4808 chr14 67411226 67411436 + 8.01 0.000 intron (NM_016445, intron 1 of 8) MIRb|SINE|MIR 834 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr11-10648 chr11 126526353 126526563 + 8.01 0.000 intron (NM_001301097, intron 3 of 15) intron (NM_001301097, intron 3 of 15) 120371 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr17-7993 chr17 49246847 49247057 + 8.01 0.000 Intergenic Intergenic -1291 NR_034161 124871 Hs.446890 NM_001007529 ENSG00000177369 FLJ40194 - uncharacterized FLJ40194 ncRNA chr7-9671 chr7 152552773 152552983 + 8.01 0.000 Intergenic Intergenic 88754 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA chr11-6654 chr11 75540022 75540232 + 8.01 0.000 Intergenic Intergenic -14186 NM_030792 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr2-12695 chr2 76927166 76927376 + 8.01 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) -58694 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr6-3504 chr6 23940308 23940518 + 8.01 0.000 Intergenic L1PREC2|LINE|L1 -185802 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr16-6639 chr16 68231847 68232057 + 8.01 0.000 exon (NM_001365265, exon 10 of 14) exon (NM_001365265, exon 10 of 14) 1547 NR_106831 102466194 NR_106831 ENSG00000284259 MIR6773 hsa-mir-6773 microRNA 6773 ncRNA chr2-14614 chr2 234076832 234077042 + 8.01 0.000 3' UTR (NM_006944, exon 8 of 8) 3' UTR (NM_006944, exon 8 of 8) 26235 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr3-8023 chr3 192394961 192395171 + 8.01 0.000 intron (NM_004113, intron 2 of 5) intron (NM_004113, intron 2 of 5) 13983 NM_021032 2257 Hs.390250 NM_004113 ENSG00000114279 FGF12 EIEE47|FGF12B|FHF1 fibroblast growth factor 12 protein-coding chr10-3597 chr10 89206660 89206870 + 8.01 0.000 exon (NM_003956, exon 1 of 1) exon (NM_003956, exon 1 of 1) 552 NM_003956 9023 Hs.47357 NM_003956 ENSG00000138135 CH25H C25H cholesterol 25-hydroxylase protein-coding chr4-4109 chr4 6470646 6470856 + 8.01 0.000 intron (NM_001206994, intron 2 of 9) CpG 1863 NM_020416 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr10-3490 chr10 68625698 68625908 + 8.01 0.000 intron (NM_030625, intron 3 of 11) intron (NM_030625, intron 3 of 11) 65466 NM_030625 80312 Hs.258855 NM_030625 ENSG00000138336 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding chr3-4352 chr3 184373501 184373711 + 8.01 0.000 intron (NM_001290028, intron 4 of 5) intron (NM_001290028, intron 4 of 5) 4601 NM_000460 7066 Hs.1166 NM_000460 ENSG00000090534 THPO MGDF|MKCSF|ML|MPLLG|THCYT1|TPO thrombopoietin protein-coding chr11-5745 chr11 2565746 2565956 + 8.01 0.000 intron (NM_181798, intron 2 of 15) intron (NM_181798, intron 2 of 15) 104397 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr15-2801 chr15 37484671 37484881 + 8.01 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -383465 NM_001220482 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr1-12039 chr1 112258263 112258473 + 8.01 0.000 Intergenic Intergenic -137846 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr3-10224 chr3 122245898 122246108 + 8.01 0.000 intron (NM_001178065, intron 1 of 6) intron (NM_001178065, intron 1 of 6) 61676 NM_001178065 846 Hs.435615 NM_000388 ENSG00000036828 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1|hCasR calcium sensing receptor protein-coding chr12-2977 chr12 112154292 112154502 + 8.01 0.000 TTS (NM_001143906) TTS (NM_001143906) 8924 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr7-4579 chr7 10737190 10737400 + 8.01 0.000 intron (NR_147499, intron 1 of 2) intron (NR_147499, intron 1 of 2) 34619 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr6-4556 chr6 41642912 41643122 + 8.01 0.000 intron (NM_001300805, intron 2 of 3) intron (NM_001300805, intron 2 of 3) 4549 NM_001300806 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding chr11-6922 chr11 109235504 109235714 + 8.01 0.000 Intergenic AluJo|SINE|Alu -186581 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr12-6957 chr12 27260919 27261129 + 8.01 0.000 intron (NM_015000, intron 1 of 13) L3b|LINE|CR1 16738 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr15-2351 chr15 35930169 35930379 + 8.01 0.000 Intergenic Intergenic 3418 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr8-6337 chr8 51161248 51161458 + 8.01 0.000 Intergenic Intergenic 648092 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr18-1834 chr18 22265160 22265370 + 8.01 0.000 Intergenic L2a|LINE|L2 95828 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr4-6757 chr4 6333070 6333280 + 8.01 0.000 intron (NM_001206994, intron 8 of 9) intron (NM_001206994, intron 8 of 9) 48693 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr1-13592 chr1 9090544 9090754 + 8.01 0.000 Intergenic HERVFH19-int|LTR|ERV1 -18390 NM_001328619 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr2-8168 chr2 85771703 85771913 + 8.01 0.000 intron (NM_032827, intron 2 of 2) MIRb|SINE|MIR 11869 NR_106719 102466516 NR_106719 ENSG00000278783 MIR6071 hsa-mir-6071 microRNA 6071 ncRNA chr19-6718 chr19 37823848 37824058 + 8.01 0.000 non-coding (NR_040015, exon 6 of 6) non-coding (NR_040015, exon 6 of 6) 6542 NR_040013 644554 Hs.683930 NR_040013 LOC644554 - uncharacterized LOC644554 ncRNA chr17-4125 chr17 81644722 81644932 + 8.01 0.000 intron (NM_031945, intron 1 of 2) intron (NM_031945, intron 1 of 2) 2522 NR_110866 83882 Hs.208219 NM_031945 ENSG00000182612 TSPAN10 OCSP tetraspanin 10 protein-coding chr1-9123 chr1 18078772 18078982 + 8.01 0.000 Intergenic Intergenic 13220 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr2-9418 chr2 232215339 232215549 + 8.01 0.000 intron (NR_046477, intron 9 of 18) intron (NR_046477, intron 9 of 18) 42791 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chrX-3098 chrX 140146523 140146733 + 8.01 0.000 Intergenic Intergenic 54961 NM_001271560 389895 Hs.127679 NM_001271560 LOC389895 - chromosome 16 open reading frame 72-like protein-coding chr17-5296 chr17 21713121 21713331 + 8.01 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 20703 NM_001194958 100134444 Hs.200629 NM_001194958 ENSG00000260458 KCNJ18 KIR2.6|TTPP2 potassium voltage-gated channel subfamily J member 18 protein-coding chr7-3569 chr7 20715688 20715898 + 8.01 0.000 intron (NM_178559, intron 11 of 18) AluSx1|SINE|Alu 68463 NM_178559 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding chr6-8275 chr6 140853917 140854127 + 8.01 0.000 Intergenic Intergenic 170208 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr7-8040 chr7 20598561 20598771 + 8.01 0.000 Intergenic Intergenic -17001 NM_001163941 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding chr1-15105 chr1 100383509 100383719 + 8.01 0.000 intron (NM_001319212, intron 3 of 13) intron (NM_001319212, intron 3 of 13) 31108 NM_001319210 8556 Hs.127411 NM_003672 ENSG00000079335 CDC14A DFNB105|DFNB32|DFNB35|cdc14|hCDC14 cell division cycle 14A protein-coding chr12-4090 chr12 56047232 56047442 + 8.01 0.000 Intergenic MIRb|SINE|MIR 5419 NM_001029 6231 Hs.447562 NM_001029 ENSG00000197728 RPS26 DBA10|S26|eS26 ribosomal protein S26 protein-coding chr8-7450 chr8 141220971 141221181 + 8.01 0.000 intron (NM_001286646, intron 2 of 7) intron (NM_001286646, intron 2 of 7) 7498 NM_001286648 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr7-5503 chr7 43813882 43814092 + 8.01 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 55307 NM_000712 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chr5-3075 chr5 35679382 35679592 + 8.01 0.000 intron (NM_024867, intron 10 of 36) intron (NM_024867, intron 10 of 36) 61624 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr11-10226 chr11 98986592 98986802 + 8.01 0.000 Intergenic L1MA1|LINE|L1 -34252 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr20-2414 chr20 21361570 21361780 + 8.01 0.000 intron (NM_001317960, intron 24 of 29) intron (NM_001317960, intron 24 of 29) 35851 NM_033176 644524 NM_033176 ENSG00000125816 NKX2-4 NKX2.4|NKX2D NK2 homeobox 4 protein-coding chr9-7732 chr9 74242014 74242224 + 8.01 0.000 Intergenic L1MA9|LINE|L1 -129412 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr6-2532 chr6 11532120 11532330 + 8.01 0.000 Intergenic MLT2B4|LTR|ERVL -5524 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr10-4460 chr10 74776130 74776340 + 8.01 0.000 Intergenic MER41C|LTR|ERV1 -49020 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr5-7764 chr5 61601946 61602156 + 8.01 0.000 Intergenic LTR16C|LTR|ERVL -35709 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr8-4001 chr8 55982463 55982673 + 8.01 0.000 intron (NM_002350, intron 10 of 12) intron (NM_002350, intron 10 of 12) -79713 NR_145767 109617001 NR_145767 ENSG00000199405 SNORA1B - small nucleolar RNA, H/ACA box 1B snoRNA chr6-6069 chr6 139637505 139637715 + 8.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR -133463 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr11-8790 chr11 10601341 10601551 + 8.01 0.000 intron (NM_001100163, intron 14 of 20) intron (NM_001100163, intron 14 of 20) -32781 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr16-7013 chr16 87861886 87862096 + 8.01 0.000 intron (NM_003486, intron 1 of 9) intron (NM_003486, intron 1 of 9) 7516 NM_003486 8140 Hs.513797 NM_003486 ENSG00000103257 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16 solute carrier family 7 member 5 protein-coding chr7-7142 chr7 2812849 2813059 + 8.01 0.000 intron (NM_001293092, intron 1 of 2) AluJr|SINE|Alu 2276 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr6-5315 chr6 143434451 143434661 + 8.01 0.000 intron (NM_001286259, intron 2 of 5) intron (NM_001286259, intron 2 of 5) 8121 NM_001286259 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase tRNA specific 2 protein-coding chr6-4079 chr6 141588243 141588453 + 8.01 0.000 Intergenic MER1B|DNA|hAT-Charlie 500451 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr5-6402 chr5 147366539 147366749 + 8.01 0.000 intron (NM_001112724, intron 8 of 12) intron (NM_001112724, intron 8 of 12) 87048 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chrX-2056 chrX 18649503 18649713 + 8.01 0.000 intron (NM_000330, intron 3 of 5) intron (NM_000330, intron 3 of 5) 22495 NM_000330 6247 Hs.715725 NM_000330 ENSG00000102104 RS1 RS|XLRS1 retinoschisin 1 protein-coding chr10-3933 chr10 91247788 91247998 + 8.01 0.000 intron (NM_001256549, intron 3 of 9) MLT1H|LTR|ERVL-MaLR 27230 NM_032373 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr3-5483 chr3 188385693 188385903 + 8.01 0.000 intron (NM_001167671, intron 2 of 10) L2c|LINE|L2 160393 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr1-9786 chr1 56934581 56934791 + 8.01 0.000 intron (NM_000066, intron 9 of 11) intron (NM_000066, intron 9 of 11) 31329 NM_000066 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr12-6959 chr12 27427512 27427722 + 8.01 0.000 intron (NR_109975, intron 1 of 3) intron (NR_109975, intron 1 of 3) 19017 NR_109975 101928646 Hs.434269 NR_109975 ENSG00000245311 ARNTL2-AS1 - ARNTL2 antisense RNA 1 ncRNA chrX-5249 chrX 137446912 137447122 + 8.01 0.000 Intergenic Intergenic -119110 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr12-5576 chr12 21463741 21463951 + 8.01 0.000 intron (NM_001350913, intron 9 of 10) intron (NM_001350913, intron 9 of 10) 25931 NM_001350912 79912 Hs.709545 NM_024854 ENSG00000121350 PYROXD1 MFM8 pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding chr5-2002 chr5 788809 789019 + 8.01 0.000 Intergenic Intergenic -4185 NR_147096 653082 NM_001351303 ENSG00000206077 ZDHHC11B DHHC-11B zinc finger DHHC-type containing 11B protein-coding chr7-4845 chr7 103081326 103081536 + 8.01 0.000 intron (NM_031905, intron 2 of 6) AluSx1|SINE|Alu 6291 NM_031905 83787 Hs.287412 NM_031905 ENSG00000170632 ARMC10 PNAS-112|PNAS112|PSEC0198|SVH armadillo repeat containing 10 protein-coding chr12-2501 chr12 80994622 80994832 + 8.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR -56812 NM_004664 8825 Hs.144333 NM_004664 ENSG00000111052 LIN7A LIN-7A|LIN7|MALS-1|MALS1|TIP-33|VELI1 lin-7 homolog A, crumbs cell polarity complex component protein-coding chr12-3980 chr12 16323425 16323635 + 8.01 0.000 Intergenic Intergenic -23612 NM_145792 4257 Hs.389700 NM_020300 ENSG00000008394 MGST1 GST12|MGST|MGST-I microsomal glutathione S-transferase 1 protein-coding chr17-7510 chr17 17199395 17199605 + 8.01 0.000 Intergenic Intergenic 6833 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr11-8192 chr11 64480243 64480453 + 8.01 0.000 Intergenic L1ME1|LINE|L1 31291 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr8-3334 chr8 37888640 37888850 + 8.01 0.000 intron (NM_001002814, intron 1 of 5) AluJb|SINE|Alu 10752 NM_001002814 80223 Hs.191179 NM_025151 ENSG00000156675 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 protein-coding chr8-2469 chr8 131730065 131730275 + 8.01 0.000 Intergenic L1MCa|LINE|L1 -173923 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr3-5446 chr3 178533110 178533320 + 8.01 0.000 intron (NR_126561, intron 5 of 5) intron (NR_126561, intron 5 of 5) -3221 NM_181361 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr2-12513 chr2 64380192 64380402 + 8.01 0.000 Intergenic LTR16C|LTR|ERVL -39449 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr4-3104 chr4 155604745 155604955 + 8.01 0.000 Intergenic Intergenic -61860 NM_001130687 2982 Hs.24258 NM_000856 ENSG00000164116 GUCY1A1 GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6 guanylate cyclase 1 soluble subunit alpha 1 protein-coding chr2-5949 chr2 36556412 36556622 + 8.01 0.000 intron (NM_005102, intron 6 of 7) intron (NM_005102, intron 6 of 7) 41651 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr2-5577 chr2 172148102 172148312 + 8.01 0.000 Intergenic Intergenic 45201 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr16-3559 chr16 57319300 57319510 + 8.01 0.000 Intergenic L1PA8|LINE|L1 -34733 NM_015993 51090 Hs.632215 NM_015993 ENSG00000102934 PLLP PMLP|TM4SF11 plasmolipin protein-coding chr21-1241 chr21 45865121 45865331 + 8.01 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 15265 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr15-3130 chr15 66312206 66312416 + 8.01 0.000 intron (NM_001323944, intron 5 of 16) intron (NM_001323944, intron 5 of 16) 18496 NM_001323946 115752 Hs.446251 NM_133375 ENSG00000166938 DIS3L DIS3L1 DIS3 like exosome 3'-5' exoribonuclease protein-coding chr7-5692 chr7 68721424 68721634 + 8.01 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 701276 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr1-14494 chr1 49229943 49230153 + 8.01 0.000 intron (NM_001323575, intron 4 of 12) MIRb|SINE|MIR -27363 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr12-7087 chr12 43742361 43742571 + 8.01 0.000 exon (NM_001098614, exon 5 of 9) exon (NM_001098614, exon 5 of 9) 16324 NM_001098614 83448 Hs.23554 NM_031292 ENSG00000129317 PUS7L - pseudouridine synthase 7 like protein-coding chr3-6610 chr3 126408758 126408968 + 8.01 0.000 intron (NM_182628, intron 3 of 16) AluJb|SINE|Alu 13954 NM_182628 348807 Hs.591305 NM_182628 ENSG00000163885 CFAP100 CCDC37|MIA1 cilia and flagella associated protein 100 protein-coding chrX-834 chrX 111102801 111103011 + 8.01 0.000 promoter-TSS (NR_136748) promoter-TSS (NR_136748) -253 NR_136748 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr3-3693 chr3 161038528 161038738 + 8.01 0.000 intron (NR_134243, intron 4 of 5) intron (NR_134243, intron 4 of 5) 66099 NM_001349161 8706 Hs.418062 NM_003781 ENSG00000169255 B3GALNT1 B3GALT3|GLCT3|GLOB|Gb4Cer|P|P1|beta3Gal-T3|galT3 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) protein-coding chr14-2802 chr14 22201066 22201276 + 8.01 0.000 Intergenic Intergenic 231582 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr22-3707 chr22 25024038 25024248 + 8.01 0.000 Intergenic Intergenic -3831 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding chr3-6667 chr3 129942328 129942538 + 8.01 0.000 Intergenic Intergenic -32287 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr1-10443 chr1 159989854 159990064 + 8.01 0.000 Intergenic Intergenic 28735 NR_038849 100505633 Hs.445045 NR_038849 ENSG00000224259 LINC01133 - long intergenic non-protein coding RNA 1133 ncRNA chr16-5708 chr16 81297666 81297876 + 8.01 0.000 Intergenic L1MB7|LINE|L1 -17195 NM_022041 8139 Hs.112569 NM_022041 ENSG00000261609 GAN GAN1|KLHL16 gigaxonin protein-coding chr1-12932 chr1 145792475 145792685 + 8.01 0.000 intron (NM_014455, intron 1 of 8) intron (NM_014455, intron 1 of 8) 31515 NM_014455 27246 Hs.523550 NM_014455 ENSG00000265491 RNF115 BCA2|ZNF364 ring finger protein 115 protein-coding chr6-6654 chr6 158854530 158854740 + 8.01 0.000 intron (NR_028496, intron 2 of 2) MER4C|LTR|ERV1 2997 NR_028496 202459 Hs.487035 NM_145303 ENSG00000243775 OSTCP1 DC2L|OSTCL oligosaccharyltransferase complex subunit pseudogene 1 pseudo chr4-2568 chr4 93772305 93772515 + 8.01 0.000 exon (NM_001510, exon 16 of 16) exon (NM_001510, exon 16 of 16) -56343 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chrX-3550 chrX 64642984 64643194 + 8.01 0.000 Intergenic L1PB4|LINE|L1 -247637 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr12-6777 chr12 8649850 8650060 + 8.01 0.000 intron (NR_123734, intron 7 of 9) L1PB2|LINE|L1 12871 NR_123733 8076 Hs.512842 NM_003480 ENSG00000197614 MFAP5 AAT9|MAGP-2|MAGP2|MFAP-5|MP25 microfibril associated protein 5 protein-coding chr3-7612 chr3 16104152 16104362 + 8.01 0.000 Intergenic Intergenic -70423 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr8-3125 chr8 60926399 60926609 + 8.01 0.000 Intergenic Intergenic 41244 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr1-8132 chr1 10815244 10815454 + 8.01 0.000 Intergenic Intergenic -18703 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr18-2196 chr18 61608799 61609009 + 8.01 0.000 Intergenic L2c|LINE|L2 -139272 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr17-5485 chr17 41581108 41581318 + 8.01 0.000 Intergenic Intergenic 5682 NM_000526 3861 Hs.654380 NM_000526 ENSG00000186847 KRT14 CK14|EBS3|EBS4|K14|NFJ keratin 14 protein-coding chr11-10767 chr11 135002878 135003088 + 8.01 0.000 Intergenic L1MB1|LINE|L1 17631 NR_135050 100507548 Hs.639995 NR_135050 LOC100507548 - uncharacterized LOC100507548 ncRNA chr8-5305 chr8 142795859 142796069 + 8.01 0.000 Intergenic Intergenic -9425 NM_003695 8581 Hs.415762 NM_003695 ENSG00000167656 LY6D E48|Ly-6D lymphocyte antigen 6 family member D protein-coding chr15-3774 chr15 65862724 65862934 + 8.01 0.000 Intergenic Intergenic -6662 NM_004663 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr1-6921 chr1 151135090 151135300 + 8.01 0.000 exon (NM_001178062, exon 14 of 19) exon (NM_001178062, exon 14 of 19) 11436 NM_001178062 10500 Hs.516316 NM_030913 ENSG00000143434 SEMA6C SEMAY|m-SemaY|m-SemaY2 semaphorin 6C protein-coding chr5-3162 chr5 72108025 72108235 + 8.01 0.000 intron (NM_005909, intron 1 of 6) CpG 655 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr6-5082 chr6 117523104 117523314 + 8.01 0.000 intron (NR_158983, intron 4 of 13) intron (NR_158983, intron 4 of 13) 40535 NM_001366459 285761 Hs.658304 NM_173674 ENSG00000164465 DCBLD1 dJ94G16.1 discoidin, CUB and LCCL domain containing 1 protein-coding chr2-13920 chr2 183020115 183020325 + 8.01 0.000 intron (NM_013436, intron 2 of 30) AluJo|SINE|Alu 18237 NM_013436 10787 Hs.603732 NM_013436 ENSG00000061676 NCKAP1 HEM2|NAP1|NAP125|p125Nap1 NCK associated protein 1 protein-coding chr11-10343 chr11 110381111 110381321 + 8.01 0.000 intron (NR_135100, intron 2 of 3) L1M5|LINE|L1 26102 NR_135100 105369486 Hs.611557 NR_135100 LINC02732 - long intergenic non-protein coding RNA 2732 ncRNA chr15-3213 chr15 73273361 73273571 + 8.01 0.000 intron (NM_002499, intron 19 of 28) intron (NM_002499, intron 19 of 28) -26444 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr9-7476 chr9 28542703 28542913 + 8.01 0.000 intron (NM_152570, intron 2 of 6) MER5A|DNA|hAT-Charlie 176497 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr9-5192 chr9 71994540 71994750 + 8.01 0.000 Intergenic AluSc8|SINE|Alu 65960 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding chr9-5423 chr9 96228548 96228758 + 8.01 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -17810 NR_146524 105376162 Hs.662614 NR_146524 ENSG00000232283 HSD17B3-AS1 - HSD17B3 antisense RNA 1 ncRNA chr11-8407 chr11 98095626 98095836 + 8.01 0.000 Intergenic Intergenic -925218 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr14-4086 chr14 65357185 65357395 + 8.01 0.000 Intergenic Intergenic -22107 NR_039857 100616176 NR_039857 ENSG00000266740 MIR4708 mir-4708 microRNA 4708 ncRNA chr22-4025 chr22 40764465 40764675 + 8.01 0.000 Intergenic AluJb|SINE|Alu 49388 NR_039923 100616283 NR_039923 ENSG00000266594 MIR4766 mir-4766 microRNA 4766 ncRNA chrX-728 chrX 153537087 153537297 + 8.01 0.000 intron (NM_001001344, intron 1 of 19) intron (NM_001001344, intron 1 of 19) 1070 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr6-5860 chr6 36479277 36479487 + 8.01 0.000 intron (NR_104480, intron 3 of 5) intron (NR_104480, intron 3 of 5) 36382 NM_001286579 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr5-7172 chr5 5159326 5159536 + 8.01 0.000 intron (NM_139056, intron 3 of 22) MIRb|SINE|MIR 19101 NM_139056 170690 Hs.661915 NM_139056 ENSG00000145536 ADAMTS16 ADAMTS16s ADAM metallopeptidase with thrombospondin type 1 motif 16 protein-coding chr14-4627 chr14 53475071 53475281 + 8.01 0.000 Intergenic L2c|LINE|L2 321822 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr3-10757 chr3 156439497 156439707 + 8.01 0.000 intron (NM_172159, intron 2 of 13) intron (NM_172159, intron 2 of 13) 7334 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr10-1767 chr10 46524787 46524997 + 8.01 0.000 Intergenic Intergenic 31179 NM_014696 9721 Hs.523375 NM_014696 ENSG00000204175 GPRIN2 GRIN2|KIAA0514 G protein regulated inducer of neurite outgrowth 2 protein-coding chr1-14739 chr1 67175360 67175570 + 8.01 0.000 intron (NM_144701, intron 3 of 10) L1MB3|LINE|L1 9011 NM_144701 149233 Hs.677426 NM_144701 ENSG00000162594 IL23R - interleukin 23 receptor protein-coding chr8-2699 chr8 95978707 95978917 + 8.01 0.000 Intergenic L2c|LINE|L2 -30464 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr5-7942 chr5 79855732 79855942 + 8.01 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -80742 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr16-5562 chr16 30911083 30911293 + 8.01 0.000 Intergenic Intergenic -11867 NM_001282351 54620 Hs.152149 NM_019085 ENSG00000099364 FBXL19 CXXC11|Fbl19|JHDM1C F-box and leucine rich repeat protein 19 protein-coding chr9-7495 chr9 31289722 31289932 + 8.01 0.000 Intergenic Intergenic 91663 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr13-4283 chr13 98440692 98440902 + 8.01 0.000 exon (NM_001286839, exon 25 of 28) exon (NM_001286839, exon 25 of 28) 81328 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr22-4168 chr22 45371890 45372100 + 8.01 0.000 intron (NM_148674, intron 13 of 24) AluSx|SINE|Alu 41604 NM_148674 27127 Hs.334176 NM_148674 ENSG00000077935 SMC1B SMC1BETA|SMC1L2 structural maintenance of chromosomes 1B protein-coding chr10-6179 chr10 15718454 15718664 + 8.01 0.000 intron (NM_001291494, intron 2 of 28) intron (NM_001291494, intron 2 of 28) 1363 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr3-4195 chr3 129614912 129615122 + 8.01 0.000 Intergenic L2b|LINE|L2 -8278 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr15-2132 chr15 73320587 73320797 + 8.01 0.000 3' UTR (NM_005477, exon 8 of 8) 3' UTR (NM_005477, exon 8 of 8) 20782 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr5-5851 chr5 180609992 180610202 + 8.01 0.000 intron (NM_002020, intron 27 of 29) intron (NM_002020, intron 27 of 29) -18598 NM_052863 92304 Hs.62492 NM_052863 ENSG00000161055 SCGB3A1 HIN-1|HIN1|LU105|PnSP-2|UGRP2 secretoglobin family 3A member 1 protein-coding chr6-7483 chr6 61004525 61004735 + 8.01 0.000 Intergenic SATR1|Satellite|Satellite -569500 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr18-2687 chr18 58661560 58661770 + 8.01 0.000 Intergenic Intergenic -9800 NM_006785 10892 Hs.601217 NM_006785 ENSG00000172175 MALT1 IMD12|MLT|MLT1|PCASP1 MALT1 paracaspase protein-coding chr15-1865 chr15 61715027 61715237 + 8.01 0.000 Intergenic Intergenic -14786 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr4-7411 chr4 65226776 65226986 + 8.01 0.000 Intergenic Intergenic -222381 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chrX-1389 chrX 154352410 154352620 + 8.01 0.000 intron (NM_001110556, intron 40 of 47) intron (NM_001110556, intron 40 of 47) 22119 NM_001110556 2316 Hs.195464 NM_001456 ENSG00000196924 FLNA ABP-280|ABPX|CSBS|CVD1|FGS2|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD filamin A protein-coding chr14-5107 chr14 88834132 88834342 + 8.01 0.000 intron (NM_144596, intron 3 of 15) intron (NM_144596, intron 3 of 15) 9586 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr20-3434 chr20 46204427 46204637 + 8.01 0.000 intron (NM_021248, intron 7 of 11) intron (NM_021248, intron 7 of 11) 86218 NM_001362758 958 Hs.472860 NM_001250 ENSG00000101017 CD40 Bp50|CDW40|TNFRSF5|p50 CD40 molecule protein-coding chr11-5888 chr11 12387027 12387237 + 8.01 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 9561 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr3-8985 chr3 17376110 17376320 + 8.01 0.000 intron (NM_014744, intron 10 of 21) intron (NM_014744, intron 10 of 21) 323805 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr1-9515 chr1 38527149 38527359 + 8.01 0.000 Intergenic Intergenic 52058 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr11-3383 chr11 128905234 128905444 + 8.01 0.000 intron (NR_045767, intron 1 of 3) intron (NR_045767, intron 1 of 3) 358 NM_145013 219833 Hs.689860 NM_145013 ENSG00000174370 C11orf45 - chromosome 11 open reading frame 45 protein-coding chr12-3560 chr12 6792548 6792758 + 8.01 0.000 intron (NM_001195016, intron 1 of 7) intron (NM_001195016, intron 1 of 7) 3125 NM_001195015 920 Hs.631659 NM_000616 ENSG00000010610 CD4 CD4mut CD4 molecule protein-coding chr3-9970 chr3 96276826 96277036 + 8.01 0.000 Intergenic Intergenic -83033 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chr22-2731 chr22 39134189 39134399 + 8.01 0.000 intron (NM_001346744, intron 5 of 5) intron (NM_001346744, intron 5 of 5) 18386 NM_001346743 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr12-4772 chr12 53068339 53068549 + 8.01 0.000 intron (NM_032840, intron 6 of 10) intron (NM_032840, intron 6 of 10) 10946 NM_032840 84926 Hs.343334 NM_032840 ENSG00000167778 SPRYD3 - SPRY domain containing 3 protein-coding chr8-4423 chr8 108595901 108596111 + 8.01 0.000 Intergenic L1PA8|LINE|L1 152382 NM_014673 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr17-8168 chr17 61215614 61215824 + 8.01 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 151985 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr8-4664 chr8 137106255 137106465 + 8.01 0.000 Intergenic Intergenic 307228 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr2-12491 chr2 62493210 62493420 + 8.01 0.000 Intergenic AluJo|SINE|Alu 12880 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr9-6892 chr9 89205615 89205825 + 8.01 0.000 Intergenic Intergenic -26902 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chrX-1783 chrX 78525717 78525927 + 8.01 0.000 Intergenic L1PA14|LINE|L1 133506 NM_152694 203430 Hs.134873 NM_152694 ENSG00000179300 RTL3 Mar3|Mart3|SIRH9|ZCCHC5|ZHC5 retrotransposon Gag like 3 protein-coding chr9-2835 chr9 126786617 126786827 + 8.01 0.000 Intergenic L2b|LINE|L2 -18284 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr18-2272 chr18 75178235 75178445 + 8.01 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger 27173 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr12-6269 chr12 45026357 45026567 + 8.01 0.000 intron (NM_001004329, intron 2 of 3) MIR|SINE|MIR 24637 NM_001004329 440097 Hs.302764 NM_001004329 ENSG00000185610 DBX2 - developing brain homeobox 2 protein-coding chr18-1777 chr18 10892598 10892808 + 8.01 0.000 intron (NM_022068, intron 4 of 51) intron (NM_022068, intron 4 of 51) -133054 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chrX-2878 chrX 146378269 146378479 + 8.01 0.000 Intergenic Intergenic -350502 NR_030581 100126341 NR_030581 ENSG00000216056 MIR891A MIRN891A microRNA 891a ncRNA chr5-5202 chr5 113190920 113191130 + 8.01 0.000 intron (NM_001085377, intron 3 of 18) intron (NM_001085377, intron 3 of 18) 103913 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr11-6807 chr11 92494392 92494602 + 8.01 0.000 intron (NM_001008781, intron 1 of 24) intron (NM_001008781, intron 1 of 24) 142401 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr15-2939 chr15 47962078 47962288 + 8.01 0.000 Intergenic Intergenic -115947 NR_120336 101928442 Hs.242804 NR_120336 ENSG00000259572 LINC01491 - long intergenic non-protein coding RNA 1491 ncRNA chr16-5259 chr16 50615787 50615997 + 8.01 0.000 intron (NM_033119, intron 4 of 9) intron (NM_033119, intron 4 of 9) -52963 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr21-1306 chr21 44900688 44900898 + 8.01 0.000 intron (NM_001303238, intron 6 of 15) intron (NM_001303238, intron 6 of 15) 20106 NM_001303238 3689 Hs.375957 NM_000211 ENSG00000160255 ITGB2 CD18|LAD|LCAMB|LFA-1|MAC-1|MF17|MFI7 integrin subunit beta 2 protein-coding chr16-2894 chr16 617319 617529 + 8.01 0.000 intron (NM_021168, intron 2 of 5) intron (NM_021168, intron 2 of 5) -13561 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr2-14410 chr2 221228656 221228866 + 8.01 0.000 Intergenic Intergenic 343543 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr8-6821 chr8 97237884 97238094 + 8.01 0.000 intron (NR_125390, intron 2 of 2) MLT1H1|LTR|ERVL-MaLR 39939 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr3-8605 chr3 164965794 164966004 + 8.01 0.000 Intergenic Intergenic 112597 NM_001041 6476 Hs.429596 NM_001041 ENSG00000090402 SI - sucrase-isomaltase protein-coding chr15-3497 chr15 98433955 98434165 + 8.01 0.000 Intergenic Intergenic -13062 NR_146567 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chr14-4492 chr14 36859095 36859305 + 8.01 0.000 intron (NM_001171170, intron 2 of 10) intron (NM_001171170, intron 2 of 10) 93191 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr3-7932 chr3 152213459 152213669 + 8.01 0.000 Intergenic Intergenic -8135 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr10-4224 chr10 123312210 123312420 + 8.01 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 157913 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr2-6677 chr2 15765783 15765993 + 8.01 0.000 Intergenic Intergenic 75106 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr18-3096 chr18 35178198 35178408 + 8.01 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -62731 NM_032347 84307 Hs.591061 NM_032347 ENSG00000186812 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding chr5-8385 chr5 124181300 124181510 + 8.01 0.000 intron (NR_125774, intron 4 of 5) MER103C|DNA|hAT-Charlie 257115 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr11-4766 chr11 118058851 118059061 + 8.01 0.000 intron (NM_001354434, intron 2 of 5) intron (NM_001354434, intron 2 of 5) -18056 NR_110734 56649 Hs.161985 NM_019894 ENSG00000137648 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane serine protease 4 protein-coding chr1-5069 chr1 101262554 101262764 + 8.01 0.000 Intergenic Intergenic 25910 NM_001400 1901 Hs.154210 NM_001400 ENSG00000170989 S1PR1 CD363|CHEDG1|D1S3362|ECGF1|EDG-1|EDG1|S1P1 sphingosine-1-phosphate receptor 1 protein-coding chr10-4403 chr10 58512355 58512565 + 8.01 0.000 promoter-TSS (NM_001080512) promoter-TSS (NM_001080512) -412 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr8-3105 chr8 31307155 31307365 + 8.01 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -273904 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr11-6864 chr11 101400437 101400647 + 8.01 0.000 Intergenic Intergenic 119363 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr17-8099 chr17 56080589 56080799 + 8.01 0.000 Intergenic MIR|SINE|MIR -72781 NM_001370326 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr9-4701 chr9 126150623 126150833 + 8.01 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 125187 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr11-5264 chr11 33597954 33598164 + 8.01 0.000 intron (NM_012194, intron 12 of 20) intron (NM_012194, intron 12 of 20) 102681 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr7-3381 chr7 113796644 113796854 + 8.01 0.000 Intergenic Intergenic 122260 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr2-10160 chr2 83597260 83597470 + 8.01 0.000 Intergenic Intergenic 74551 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr3-8927 chr3 13380158 13380368 + 8.01 0.000 intron (NM_024923, intron 6 of 39) intron (NM_024923, intron 6 of 39) 40059 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr1-10620 chr1 179209322 179209532 + 8.01 0.000 intron (NM_007314, intron 1 of 11) MER39|LTR|ERV1 20250 NM_001168237 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr19-2498 chr19 8342453 8342663 + 8.01 0.000 intron (NM_198471, intron 1 of 10) intron (NM_198471, intron 1 of 10) 704 NM_198471 256949 Hs.745036 NM_198471 ENSG00000186994 KANK3 ANKRD47 KN motif and ankyrin repeat domains 3 protein-coding chr11-9728 chr11 68422424 68422634 + 8.01 0.000 intron (NM_002335, intron 13 of 22) intron (NM_002335, intron 13 of 22) -38223 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr1-15094 chr1 99305864 99306074 + 8.01 0.000 exon (NM_001166252, exon 6 of 6) exon (NM_001166252, exon 6 of 6) 41677 NM_001166252 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chr9-4937 chr9 14119869 14120079 + 8.01 0.000 intron (NM_001282787, intron 7 of 10) intron (NM_001282787, intron 7 of 10) 60828 NM_001282787 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr17-8236 chr17 65280962 65281172 + 8.01 0.000 Intergenic L1MB3|LINE|L1 143697 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr12-6358 chr12 60539670 60539880 + 8.01 0.000 Intergenic MER57C2|LTR|ERV1 850405 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr7-3898 chr7 112789612 112789822 + 8.01 0.000 intron (NM_001287497, intron 1 of 5) intron (NM_001287497, intron 1 of 5) 676 NM_022484 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding chr3-2370 chr3 170741320 170741530 + 8.01 0.000 intron (NR_135556, intron 5 of 5) L2b|LINE|L2 128770 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr14-3684 chr14 100589843 100590053 + 8.01 0.000 Intergenic Intergenic -20156 NM_020836 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr1-8152 chr1 14895157 14895367 + 8.01 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) -28867 NM_001018000 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr15-4760 chr15 69661979 69662189 + 8.01 0.000 intron (NR_126437, intron 3 of 5) L2|LINE|L2 69884 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr8-5545 chr8 72368821 72369031 + 8.01 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -117292 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo chr6-6461 chr6 107712895 107713105 + 8.01 0.000 intron (NM_001286408, intron 5 of 6) intron (NM_001286408, intron 5 of 6) 19150 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr17-6566 chr17 44795943 44796153 + 8.01 0.000 Intergenic LTR1A2|LTR|ERV1 34239 NM_005497 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr10-4098 chr10 64355542 64355752 + 8.01 0.000 Intergenic Intergenic -469881 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr2-6611 chr2 237208268 237208478 + 8.01 0.000 Intergenic Intergenic 122484 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr4-8560 chr4 166071158 166071368 + 8.01 0.000 intron (NM_012464, intron 16 of 20) intron (NM_012464, intron 16 of 20) 198026 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr1-16363 chr1 220492106 220492316 + 8.01 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -35925 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr19-3366 chr19 11278041 11278251 + 8.01 0.000 Intergenic Intergenic -15622 NM_001367830 57572 Hs.591002 NM_020812 ENSG00000130158 DOCK6 AOS2|ZIR1 dedicator of cytokinesis 6 protein-coding chr12-1876 chr12 53676804 53677014 + 8.01 0.000 promoter-TSS (NM_001369757) promoter-TSS (NM_001369757) -579 NM_001002031 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr10-4004 chr10 201126 201336 + 8.01 0.000 intron (NM_001370123, intron 3 of 12) Charlie29a|DNA|hAT-Charlie 21237 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr12-6114 chr12 126016264 126016474 + 8.01 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -32995 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr11-10406 chr11 114236899 114237109 + 8.01 0.000 intron (NM_006006, intron 4 of 6) intron (NM_006006, intron 4 of 6) -58809 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr2-8786 chr2 166573646 166573856 + 8.01 0.000 Intergenic Intergenic -86780 NR_045628 6332 Hs.596087 NM_002976 ENSG00000136546 SCN7A NaG|Nav2.1|Nav2.2|SCN6A sodium voltage-gated channel alpha subunit 7 protein-coding chr4-4869 chr4 114238334 114238544 + 8.01 0.000 Intergenic Intergenic -258792 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr2-12574 chr2 69970227 69970437 + 8.01 0.000 intron (NR_033872, intron 9 of 10) L2c|LINE|L2 -8067 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase retroviral like 1 protein-coding chr5-6760 chr5 82164004 82164214 + 8.01 0.000 intron (NM_031482, intron 3 of 7) intron (NM_031482, intron 3 of 7) 114245 NM_001025 6228 Hs.527193 NM_001025 ENSG00000186468 RPS23 BTDD|MABAS|MCINS|PAMAS|S23|uS12 ribosomal protein S23 protein-coding chr19-2696 chr19 18473365 18473575 + 8.01 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) -35337 NM_001170938 51477 Hs.405873 NM_016368 ENSG00000105655 ISYNA1 INO1|INOS|IPS|IPS 1|IPS-1 inositol-3-phosphate synthase 1 protein-coding chr11-3452 chr11 67002507 67002717 + 8.01 0.000 Intergenic Intergenic -20181 NM_001318773 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr5-8261 chr5 111849295 111849505 + 8.01 0.000 intron (NM_001142474, intron 2 of 3) L2c|LINE|L2 -63108 NR_046678 100873948 Hs.147716 NR_046678 ENSG00000250095 NREP-AS1 - NREP antisense RNA 1 ncRNA chr2-5502 chr2 144520946 144521156 + 8.01 0.000 promoter-TSS (NM_014795) promoter-TSS (NM_014795) -817 NR_110570 101928455 Hs.333693 NR_110570 LINC01412 - long intergenic non-protein coding RNA 1412 ncRNA chrX-3517 chrX 47326023 47326233 + 8.01 0.000 Intergenic AluSq2|SINE|Alu -44472 NM_003446 7712 Hs.89897 NM_003446 ENSG00000147117 ZNF157 HZF22 zinc finger protein 157 protein-coding chr14-3241 chr14 76086550 76086760 + 8.01 0.000 Intergenic Intergenic -65230 NM_001322029 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr6-4885 chr6 90562274 90562484 + 8.01 0.000 intron (NM_145331, intron 3 of 16) L1PA5|LINE|L1 24693 NM_145332 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr1-6513 chr1 25765542 25765752 + 8.01 0.000 intron (NM_020379, intron 7 of 11) L3|LINE|CR1 -34546 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr1-11523 chr1 156847817 156848027 + 8.01 0.000 intron (NM_014215, intron 7 of 21) MER91B|DNA|hAT-Tip100 11195 NM_014215 3645 Hs.248138 NM_014215 ENSG00000027644 INSRR IRR insulin receptor related receptor protein-coding chr1-11640 chr1 246156045 246156255 + 8.01 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 261262 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr10-3620 chr10 94570906 94571116 + 8.01 0.000 intron (NM_001289075, intron 6 of 20) MER58A|DNA|hAT-Charlie 25223 NM_001289075 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding chr9-2395 chr9 133617281 133617491 + 8.01 0.000 Intergenic Intergenic -18977 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr17-3501 chr17 50686685 50686895 + 8.01 0.000 intron (NM_003786, intron 29 of 30) intron (NM_003786, intron 29 of 30) 21124 NM_052855 91369 Hs.463426 NM_052855 ENSG00000154945 ANKRD40 - ankyrin repeat domain 40 protein-coding chr16-3563 chr16 58047605 58047815 + 8.01 0.000 TTS (NM_002428) TTS (NM_002428) 21956 NM_002428 4324 Hs.80343 NM_002428 ENSG00000102996 MMP15 MMP-15|MT2-MMP|MT2MMP|MTMMP2|SMCP-2 matrix metallopeptidase 15 protein-coding chr1-6884 chr1 117794232 117794442 + 8.01 0.000 Intergenic MamRep605|LTR?|LTR? 135284 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr1-9648 chr1 47484562 47484772 + 8.01 0.000 Intergenic Intergenic -47350 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr4-4049 chr4 3193832 3194042 + 8.01 0.000 intron (NM_002111, intron 40 of 66) intron (NM_002111, intron 40 of 66) -50432 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr3-6115 chr3 53694965 53695175 + 8.01 0.000 intron (NM_000720, intron 8 of 48) intron (NM_000720, intron 8 of 48) 151349 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr8-3952 chr8 47841493 47841703 + 8.01 0.000 intron (NM_001081640, intron 54 of 84) L1PA16|LINE|L1 -103434 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr3-5201 chr3 73605454 73605664 + 8.01 0.000 intron (NM_015009, intron 2 of 9) intron (NM_015009, intron 2 of 9) -18009 NR_046681 101927249 Hs.733334 NR_046681 PDZRN3-AS1 - PDZRN3 antisense RNA 1 ncRNA chr14-1880 chr14 89535341 89535551 + 8.01 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) -40770 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA chr6-2358 chr6 133764528 133764738 + 8.01 0.000 intron (NR_109982, intron 3 of 8) GA-rich|Low_complexity|Low_complexity -56514 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr7-7343 chr7 50524505 50524715 + 8.01 0.000 intron (NM_001242889, intron 4 of 12) L1MD2|LINE|L1 -7149 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr3-10833 chr3 164515443 164515653 + 8.01 0.000 Intergenic MER52A|LTR|ERV1 315932 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr1-6858 chr1 109797021 109797231 + 8.01 0.000 Intergenic L2b|LINE|L2 -33203 NM_001319952 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr19-7100 chr19 57225696 57225906 + 8.01 0.000 Intergenic Intergenic -5222 NM_001015878 6795 Hs.98338 NM_003160 ENSG00000105146 AURKC AIE2|AIK3|ARK3|AurC|HEL-S-90|SPGF5|STK13|aurora-C aurora kinase C protein-coding chr6-4231 chr6 5704416 5704626 + 8.01 0.000 intron (NM_006567, intron 6 of 6) Charlie25|DNA|hAT-Charlie -9249 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr10-2990 chr10 89032006 89032216 + 8.01 0.000 Intergenic Intergenic -31225 NR_039826 100616128 NR_039826 ENSG00000283664 MIR4679-1 - microRNA 4679-1 ncRNA chr1-9170 chr1 20414945 20415155 + 8.01 0.000 intron (NR_033887, intron 1 of 11) L2a|LINE|L2 13744 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr5-8124 chr5 98826609 98826819 + 8.01 0.000 Intergenic MLT2A2|LTR|ERVL 53051 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr14-5382 chr14 103958741 103958951 + 8.01 0.000 intron (NM_153046, intron 2 of 35) MLT1D|LTR|ERVL-MaLR -16317 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr17-3851 chr17 44351423 44351633 + 8.01 0.000 intron (NM_002087, intron 9 of 12) intron (NM_002087, intron 9 of 12) 6442 NM_002087 2896 Hs.514220 NM_002087 ENSG00000030582 GRN CLN11|GEP|GP88|PCDGF|PEPI|PGRN granulin precursor protein-coding chr17-3287 chr17 45022103 45022313 + 8.01 0.000 Intergenic Intergenic 29424 NM_001288655 79877 Hs.463148 NM_024819 ENSG00000172992 DCAKD - dephospho-CoA kinase domain containing protein-coding chr3-10005 chr3 100614192 100614402 + 8.01 0.000 intron (NM_032787, intron 1 of 15) intron (NM_032787, intron 1 of 15) 4696 NM_032787 84873 Hs.334511 NM_032787 ENSG00000144820 ADGRG7 GPR128 adhesion G protein-coupled receptor G7 protein-coding chr17-4951 chr17 78567797 78568007 + 8.01 0.000 intron (NM_173628, intron 9 of 80) intron (NM_173628, intron 9 of 80) 9492 NM_173628 8632 Hs.375975 NM_003727 ENSG00000187775 DNAH17 DNAHL1|DNEL2 dynein axonemal heavy chain 17 protein-coding chr3-5480 chr3 188185126 188185336 + 8.01 0.000 intron (NM_001167672, intron 1 of 9) MIRb|SINE|MIR 6688 NR_024413 401105 Hs.679026 NM_207488 ENSG00000279891 FLJ42393 AVPC1948 uncharacterized LOC401105 ncRNA chr20-3205 chr20 51359481 51359691 + 8.01 0.000 Intergenic Intergenic 93391 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr7-4002 chr7 140269699 140269909 + 8.01 0.000 Intergenic Intergenic 92543 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr5-7235 chr5 9649279 9649489 + 8.01 0.000 intron (NR_027112, intron 11 of 12) intron (NR_027112, intron 11 of 12) -19033 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr2-13089 chr2 111717072 111717282 + 8.01 0.000 Intergenic Intergenic 53957 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr7-8642 chr7 70574706 70574916 + 8.01 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -557333 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr6-7105 chr6 34555208 34555418 + 8.01 0.000 intron (NM_012391, intron 1 of 5) intron (NM_012391, intron 1 of 5) 1016 NM_012391 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr3-5004 chr3 23368821 23369031 + 8.01 0.000 intron (NM_001370225, intron 3 of 5) intron (NM_001370225, intron 3 of 5) 165599 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr2-12248 chr2 44439585 44439795 + 8.01 0.000 intron (NM_024766, intron 3 of 10) AluY|SINE|Alu 77743 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr16-2998 chr16 27572396 27572606 + 8.01 0.000 intron (NM_015202, intron 1 of 27) intron (NM_015202, intron 1 of 27) 22357 NM_015202 23247 Hs.460459 NM_015202 ENSG00000047578 KIAA0556 JBTS26 KIAA0556 protein-coding chr2-5011 chr2 224678544 224678754 + 8.01 0.000 Intergenic Intergenic -93252 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chrX-2601 chrX 106436477 106436687 + 8.01 0.000 Intergenic Intergenic -175348 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr14-2954 chr14 49662191 49662401 + 8.01 0.000 intron (NM_001348385, intron 10 of 18) intron (NM_001348385, intron 10 of 18) 25918 NM_001197331 5427 Hs.162777 NM_002692 ENSG00000100479 POLE2 DPE2 DNA polymerase epsilon 2, accessory subunit protein-coding chr2-10497 chr2 224438064 224438274 + 8.01 0.000 Intergenic MLT2B1|LTR|ERVL -36062 NM_001122779 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr7-6752 chr7 8125883 8126093 + 8.01 0.000 intron (NR_146928, intron 13 of 14) intron (NR_146928, intron 13 of 14) 136064 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr10-7380 chr10 2899528 2899738 + 8.01 0.000 Intergenic Intergenic 167300 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr4-4861 chr4 113061846 113062056 + 8.01 0.000 intron (NM_001354232, intron 1 of 46) L1MA2|LINE|L1 12298 NM_001148 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr13-4016 chr13 71626728 71626938 + 8.01 0.000 intron (NM_001366712, intron 3 of 11) intron (NM_001366712, intron 3 of 11) 240359 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chrX-5051 chrX 123551316 123551526 + 8.01 0.000 Intergenic A-rich|Low_complexity|Low_complexity 181631 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr6-6796 chr6 4907890 4908100 + 8.01 0.000 intron (NM_001368126, intron 2 of 6) intron (NM_001368126, intron 2 of 6) 17955 NM_001143971 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr3-9204 chr3 37053854 37054064 + 8.01 0.000 exon (NM_001348304, exon 16 of 16) exon (NM_001348304, exon 16 of 16) 60609 NM_001354626 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding chr7-8215 chr7 32383917 32384127 + 8.01 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 44202 NM_001322059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr9-5180 chr9 70291350 70291560 + 8.01 0.000 intron (NM_015110, intron 8 of 24) L1M4|LINE|L1 32477 NM_015110 23137 Hs.534189 NM_015110 ENSG00000198887 SMC5 SMC5L1 structural maintenance of chromosomes 5 protein-coding chr8-3729 chr8 21810906 21811116 + 8.01 0.000 Intergenic Intergenic -22136 NM_001165039 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr20-1466 chr20 420791 421001 + 8.01 0.000 exon (NM_031229, exon 7 of 12) exon (NM_031229, exon 7 of 12) 12597 NR_136659 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr17-5177 chr17 11284846 11285056 + 8.01 0.000 intron (NM_001173461, intron 2 of 3) intron (NM_001173461, intron 2 of 3) 43528 NM_001173461 388336 Hs.592124 NM_175903 ENSG00000188803 SHISA6 - shisa family member 6 protein-coding chr2-7391 chr2 7737054 7737264 + 8.01 0.000 Intergenic Intergenic 162496 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr11-8092 chr11 39073907 39074117 + 8.01 0.000 Intergenic L1M4|LINE|L1 425154 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr6-2924 chr6 22231720 22231930 + 8.01 0.000 Intergenic LTR16A1|LTR|ERVL 65211 NM_000948 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chrX-955 chrX 91117957 91118167 + 8.01 0.000 Intergenic AluSx3|SINE|Alu -316777 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr10-2829 chr10 27743273 27743483 + 8.01 0.000 exon (NM_173576, exon 2 of 7) exon (NM_173576, exon 2 of 7) -1237 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr2-5241 chr2 47617592 47617802 + 8.01 0.000 Intergenic Intergenic -47366 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr2-10923 chr2 73686388 73686598 + 8.01 0.000 TTS (NR_003683) TTS (NR_003683) 14847 NM_016347 51471 Hs.278983 NM_016347 ENSG00000204872 NAT8B CML2|Hcml2|NAT8BP N-acetyltransferase 8B (putative, gene/pseudogene) protein-coding chr7-5718 chr7 71002055 71002265 + 8.01 0.000 Intergenic MLT2A2|LTR|ERVL -129984 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chrX-1583 chrX 75407377 75407587 + 8.01 0.000 intron (NM_001146256, intron 9 of 10) SVA_B|Retroposon|SVA 115555 NM_144969 158866 Hs.253211 NM_144969 ENSG00000102383 ZDHHC15 DHHC15|MRX91 zinc finger DHHC-type containing 15 protein-coding chr1-13144 chr1 201546165 201546375 + 8.01 0.000 Intergenic Intergenic 26366 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr5-9185 chr5 179037624 179037834 + 8.01 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 13925 NM_001136116 345462 Hs.445740 NM_001136116 ENSG00000234284 ZNF879 DKFZp686E2433 zinc finger protein 879 protein-coding chr11-8682 chr11 4466428 4466638 + 8.01 0.000 Intergenic MSTC-int|LTR|ERVL-MaLR 17238 NM_001005172 119774 Hs.553568 NM_001005172 ENSG00000181963 OR52K2 OR11-7 olfactory receptor family 52 subfamily K member 2 protein-coding chr9-2715 chr9 89533558 89533768 + 8.01 0.000 Intergenic Intergenic -35690 NM_001371194 chr2-11188 chr2 155795372 155795582 + 8.01 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 459454 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr1-9163 chr1 20127399 20127609 + 8.01 0.000 Intergenic Intergenic -7938 NM_001271814 26279 Hs.189507 NM_012400 ENSG00000117215 PLA2G2D PLA2IID|SPLASH|sPLA2-IID|sPLA2S phospholipase A2 group IID protein-coding chr12-4506 chr12 22969729 22969939 + 8.01 0.000 Intergenic Intergenic -205802 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr7-3584 chr7 24507018 24507228 + 8.01 0.000 Intergenic L2c|LINE|L2 -66329 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr2-13930 chr2 183664245 183664455 + 8.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR 539907 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr1-8884 chr1 5344756 5344966 + 8.01 0.000 Intergenic MER91A|DNA|hAT-Tip100 517880 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr14-4425 chr14 32163485 32163695 + 8.01 0.000 Intergenic Intergenic -38455 NR_104088 101954278 NR_104088 ENSG00000202337 RNU6-8 U6-8 RNA, U6 small nuclear 8 snRNA chr8-3426 chr8 75315293 75315503 + 8.01 0.000 Intergenic Intergenic -36509 NR_103849 101805492 Hs.571424 NR_103848 CASC9 ESCCAL-1|ESSCAL1|LINC00981|linc-JPH1 cancer susceptibility 9 ncRNA chr2-12409 chr2 55501819 55502029 + 8.01 0.000 Intergenic Intergenic -17671 NM_001282761 112942 Hs.264208 NM_080667 ENSG00000163001 CFAP36 BARTL1|CCDC104 cilia and flagella associated protein 36 protein-coding chr9-3710 chr9 110819223 110819433 + 8.01 0.000 Intergenic MamGypLTR3a|LTR|Gypsy 91066 NM_001369398 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr2-2833 chr2 109279555 109279765 + 8.01 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 33965 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr3-8061 chr3 8121071 8121281 + 8.01 0.000 Intergenic LTR16A1|LTR|ERVL -104869 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr8-2884 chr8 141651475 141651685 + 8.01 0.000 Intergenic Intergenic 134733 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr19-6634 chr19 31850125 31850335 + 8.01 0.000 Intergenic L1MC3|LINE|L1 -175632 NR_110674 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA chr14-3861 chr14 84699089 84699299 + 8.01 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -572738 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr1-11078 chr1 227913909 227914119 + 8.01 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 27669 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr9-5228 chr9 76322932 76323142 + 8.01 0.000 intron (NM_001190482, intron 30 of 36) intron (NM_001190482, intron 30 of 36) 71389 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr15-4346 chr15 40648381 40648591 + 8.01 0.000 intron (NM_144508, intron 17 of 25) intron (NM_144508, intron 17 of 25) 46619 NR_040058 100505648 Hs.586876 NR_040058 ENSG00000245849 RAD51-AS1 TODRA RAD51 antisense RNA 1 ncRNA chr7-5878 chr7 92843183 92843393 + 8.01 0.000 intron (NR_110088, intron 1 of 1) intron (NR_110088, intron 1 of 1) -6661 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr6-6456 chr6 105091642 105091852 + 8.01 0.000 Intergenic Intergenic 44599 NM_147147 11149 Hs.221660 NM_007073 ENSG00000112276 BVES CARICK|HBVES|LGMD2X|LGMDR25|POP1|POPDC1 blood vessel epicardial substance protein-coding chr20-3738 chr20 18360454 18360664 + 8.01 0.000 Intergenic L2|LINE|L2 -18490 NR_034167 440757 Hs.120399 NM_001004344 ENSG00000237282 LINC00851 DZANK1-AS1 long intergenic non-protein coding RNA 851 ncRNA chr4-2723 chr4 5021548 5021758 + 8.01 0.000 Intergenic Intergenic -2195 NM_018659 54360 Hs.13872 NM_018659 ENSG00000170891 CYTL1 C17|C4orf4 cytokine like 1 protein-coding chr11-9708 chr11 67873183 67873393 + 8.01 0.000 Intergenic Intergenic -67952 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr16-3562 chr16 57808180 57808390 + 8.01 0.000 Intergenic Intergenic -2352 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding chr2-11886 chr2 23607031 23607241 + 8.01 0.000 intron (NM_052920, intron 3 of 13) MLT1A0|LTR|ERVL-MaLR 221957 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr10-9193 chr10 132110240 132110450 + 8.01 0.000 intron (NM_001323086, intron 2 of 23) intron (NM_001323086, intron 2 of 23) 44399 NM_001323087 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr2-12694 chr2 76912868 76913078 + 8.01 0.000 intron (NR_146416, intron 1 of 1) MSTA|LTR|ERVL-MaLR -72992 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr16-6861 chr16 83706483 83706693 + 8.01 0.000 intron (NM_001220489, intron 9 of 12) MIR3|SINE|MIR 97388 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr20-2234 chr20 74784 74994 + 8.01 0.000 Intergenic Intergenic -12783 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr2-10787 chr2 44021686 44021896 + 8.01 0.000 Intergenic HERVH-int|LTR|ERV1 -25802 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr14-4775 chr14 64213183 64213393 + 8.01 0.000 promoter-TSS (NM_182913) promoter-TSS (NM_182913) -856 NM_182913 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr5-7809 chr5 66147241 66147451 + 8.01 0.000 intron (NM_139168, intron 1 of 12) intron (NM_139168, intron 1 of 12) 2511 NM_139168 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding chr1-8144 chr1 12434388 12434598 + 8.01 0.000 intron (NM_015378, intron 65 of 69) intron (NM_015378, intron 65 of 69) -72753 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr10-5798 chr10 107161425 107161635 + 8.01 0.000 intron (NM_001206569, intron 1 of 25) intron (NM_001206569, intron 1 of 25) 3176 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr3-7427 chr3 118618154 118618364 + 8.01 0.000 intron (NR_135547, intron 2 of 3) intron (NR_135547, intron 2 of 3) -23509 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr10-2433 chr10 3138494 3138704 + 8.01 0.000 intron (NR_144639, intron 25 of 26) intron (NR_144639, intron 25 of 26) -3002 NR_038284 100507034 Hs.665365 NR_038284 ENSG00000237399 PITRM1-AS1 - PITRM1 antisense RNA 1 ncRNA chr12-1524 chr12 74147107 74147317 + 8.01 0.000 intron (NR_038300, intron 6 of 6) L1M8|LINE|L1 145419 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr1-12888 chr1 110525897 110526107 + 8.01 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -6827 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr4-3017 chr4 127782956 127783166 + 8.01 0.000 promoter-TSS (NM_001317382) promoter-TSS (NM_001317382) -462 NM_001317382 22824 Hs.135554 NM_014278 ENSG00000164070 HSPA4L APG-1|HSPH3|Osp94 heat shock protein family A (Hsp70) member 4 like protein-coding chr15-1710 chr15 77966842 77967052 + 8.01 0.000 Intergenic Intergenic -22386 NR_157580 440292 NR_157580 LOC440292 - COMM domain containing 4 pseudogene pseudo chr7-5140 chr7 5469760 5469970 + 8.01 0.000 intron (NM_001363441, intron 4 of 4) intron (NM_001363441, intron 4 of 4) 26052 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr12-4364 chr12 3730822 3731032 + 8.01 0.000 intron (NM_001144958, intron 2 of 19) L1ME4b|LINE|L1 22182 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr2-7892 chr2 54811151 54811361 + 8.01 0.000 intron (NM_001039753, intron 1 of 40) intron (NM_001039753, intron 1 of 40) 86244 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr2-4897 chr2 131641517 131641727 + 8.01 0.000 intron (NR_108087, intron 1 of 1) L1MCc|LINE|L1 4597 NR_108087 101927994 Hs.635757 NR_108087 ENSG00000224559 LINC01087 - long intergenic non-protein coding RNA 1087 ncRNA chr2-7884 chr2 54053134 54053344 + 8.01 0.000 intron (NM_001320586, intron 3 of 6) intron (NM_001320586, intron 3 of 6) -62376 NM_001320589 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr9-3617 chr9 87872118 87872328 + 8.01 0.000 intron (NR_149022, intron 3 of 3) intron (NR_149022, intron 3 of 3) -10654 NM_178828 286234 Hs.130672 NM_178828 ENSG00000177992 SPATA31E1 C9orf79|FAM75E1 SPATA31 subfamily E member 1 protein-coding chr15-3263 chr15 76164755 76164965 + 8.01 0.000 intron (NM_152335, intron 5 of 10) intron (NM_152335, intron 5 of 10) 16626 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr13-4149 chr13 85081439 85081649 + 8.01 0.000 intron (NR_126383, intron 1 of 5) intron (NR_126383, intron 1 of 5) 66513 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr11-6322 chr11 62151615 62151825 + 8.01 0.000 intron (NM_001040694, intron 18 of 18) intron (NM_001040694, intron 18 of 18) 27709 NM_001040694 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr12-6503 chr12 106604023 106604233 + 8.01 0.000 intron (NM_001206691, intron 1 of 17) AluSx|SINE|Alu 2980 NM_001206691 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr18-2270 chr18 74981324 74981534 + 8.01 0.000 intron (NM_017757, intron 7 of 7) intron (NM_017757, intron 7 of 7) 224084 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr3-8263 chr3 52183627 52183837 + 8.01 0.000 Intergenic Intergenic -14351 NM_199166 211 Hs.476308 NM_000688 ENSG00000023330 ALAS1 ALAS|ALAS-H|ALAS3|ALASH|MIG4 5'-aminolevulinate synthase 1 protein-coding chr2-9343 chr2 226185801 226186011 + 8.01 0.000 Intergenic Intergenic 43112 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr2-12302 chr2 46893467 46893677 + 8.01 0.000 Intergenic L1MD1|LINE|L1 22234 NM_001171509 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr17-7800 chr17 39944264 39944474 + 8.01 0.000 exon (NM_001195545, exon 2 of 2) exon (NM_001195545, exon 2 of 2) 2895 NM_001195545 100505591 Hs.145136 NM_001195545 ENSG00000204913 LRRC3C - leucine rich repeat containing 3C protein-coding chr7-7840 chr7 4627281 4627491 + 8.01 0.000 Intergenic L3b|LINE|CR1 -54909 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr13-3312 chr13 53442593 53442803 + 8.01 0.000 Intergenic AluSx1|SINE|Alu -290798 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr1-14399 chr1 44310473 44310683 + 8.01 0.000 intron (NM_001301698, intron 4 of 7) intron (NM_001301698, intron 4 of 7) 44679 NM_024066 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding chrX-2592 chrX 105154200 105154410 + 8.01 0.000 intron (NM_017416, intron 2 of 10) MER4D0|LTR|ERV1 66388 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr20-2652 chr20 43993087 43993297 + 8.01 0.000 intron (NM_001098797, intron 2 of 8) L2a|LINE|L2 47296 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr3-10687 chr3 150910309 150910519 + 8.01 0.000 Intergenic MLT1E1|LTR|ERVL-MaLR -4975 NM_001351281 646951 Hs.380222 NM_001351281 MINDY4B C3orf76|FAM188B2 MINDY family member 4B protein-coding chr17-6334 chr17 66459110 66459320 + 8.01 0.000 intron (NM_002737, intron 2 of 16) AluJb|SINE|Alu -42361 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr5-6796 chr5 95632014 95632224 + 8.01 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 12032 NM_199243 285601 Hs.143315 NM_199243 ENSG00000178015 GPR150 PGR11 G protein-coupled receptor 150 protein-coding chr13-1880 chr13 31708606 31708816 + 8.01 0.000 Intergenic Intergenic -30815 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr6-4799 chr6 78727686 78727896 + 8.01 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -139760 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chr10-9062 chr10 124837819 124838029 + 8.01 0.000 Intergenic Intergenic 36105 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr10-4120 chr10 71797096 71797306 + 8.01 0.000 exon (NM_001171933, exon 2 of 23) exon (NM_001171933, exon 2 of 23) 1430 NM_001171933 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr9-8825 chr9 135108563 135108773 + 8.01 0.000 intron (NM_001282611, intron 5 of 5) MIR|SINE|MIR 21000 NM_001282611 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr9-8058 chr9 97518878 97519088 + 8.01 0.000 intron (NM_003275, intron 1 of 9) intron (NM_003275, intron 1 of 9) 17317 NM_003275 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr20-3716 chr20 16734788 16734998 + 8.01 0.000 intron (NM_198220, intron 3 of 6) intron (NM_198220, intron 3 of 6) 4867 NM_198220 6629 Hs.280378 NM_003092 ENSG00000125870 SNRPB2 Msl1|U2B'' small nuclear ribonucleoprotein polypeptide B2 protein-coding chrX-4486 chrX 64184534 64184744 + 8.01 0.000 TTS (NM_152424) TTS (NM_152424) 21069 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding chr7-4161 chr7 101108261 101108471 + 8.01 0.000 Intergenic Intergenic -18723 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr9-8658 chr9 129963076 129963286 + 8.01 0.000 intron (NM_001363755, intron 4 of 15) intron (NM_001363755, intron 4 of 15) 80008 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr20-1740 chr20 46045647 46045857 + 8.01 0.000 intron (NM_020708, intron 12 of 25) intron (NM_020708, intron 12 of 25) 16537 NM_020708 57468 Hs.21413 NM_020708 ENSG00000124140 SLC12A5 EIEE34|EIG14|KCC2|hKCC2 solute carrier family 12 member 5 protein-coding chr9-8151 chr9 103261240 103261450 + 8.01 0.000 intron (NR_121578, intron 6 of 9) AluSx|SINE|Alu 63688 NR_121578 101928496 Hs.410860 NR_121578 ENSG00000225564 LINC01492 - long intergenic non-protein coding RNA 1492 ncRNA chr1-15729 chr1 170772968 170773178 + 8.01 0.000 Intergenic L2a|LINE|L2 108942 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr21-1820 chr21 39918983 39919193 + 8.01 0.000 intron (NM_006198, intron 2 of 2) intron (NM_006198, intron 2 of 2) 51650 NM_006198 5121 Hs.80296 NM_006198 ENSG00000183036 PCP4 PEP-19 Purkinje cell protein 4 protein-coding chr7-9448 chr7 134562038 134562248 + 8.01 0.000 intron (NM_001080538, intron 2 of 11) AluSx|SINE|Alu 13033 NR_160302 441282 Hs.729418 NM_001080538 ENSG00000227471 AKR1B15 AKR1B10L|AKR1B10L, AK1R1B7|AKR1R1B7 aldo-keto reductase family 1 member B15 protein-coding chr2-3519 chr2 232520638 232520848 + 8.01 0.000 intron (NM_001369848, intron 1 of 12) intron (NM_001369848, intron 1 of 12) 280 NM_001369848 646960 Hs.570310 NM_001195129 ENSG00000237412 PRSS56 MCOP6 serine protease 56 protein-coding chr13-459 chr13 28494975 28495185 + 8.01 0.000 promoter-TSS (NM_001159920) promoter-TSS (NM_001159920) 48 NM_001160030 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr21-812 chr21 29670615 29670825 + 8.01 0.000 intron (NM_000830, intron 4 of 16) intron (NM_000830, intron 4 of 16) 74680 NR_033368 100379661 Hs.659368 NR_033368 ENSG00000156273 GRIK1-AS2 C21orf41|NCRNA00258 GRIK1 antisense RNA 2 ncRNA chr2-13235 chr2 124866534 124866744 + 8.01 0.000 intron (NM_130773, intron 20 of 23) L2b|LINE|L2 841352 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr10-7142 chr10 101165365 101165575 + 8.01 0.000 Intergenic L1MB4|LINE|L1 -10852 NR_120620 101927396 Hs.551648 NR_120620 ENSG00000237579 LINC01514 - long intergenic non-protein coding RNA 1514 ncRNA chr20-4045 chr20 37237326 37237536 + 8.01 0.000 intron (NM_001324303, intron 16 of 16) intron (NM_001324303, intron 16 of 16) 19477 NM_021081 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chrX-1628 chrX 118968492 118968702 + 8.01 0.000 Intergenic Intergenic -6017 NR_110311 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr5-2632 chr5 172631342 172631552 + 8.01 0.000 Intergenic Intergenic -9816 NM_001308177 54492 Hs.91521 NM_001142651 ENSG00000214357 NEURL1B NEURL3|RNF67B|hNeur2|neur2 neuralized E3 ubiquitin protein ligase 1B protein-coding chr6-4785 chr6 76574915 76575125 + 8.01 0.000 intron (NR_149101, intron 2 of 2) intron (NR_149101, intron 2 of 2) 18603 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr2-10219 chr2 107211152 107211362 + 8.01 0.000 intron (NR_049853, intron 2 of 3) LTR49-int|LTR|ERV1 138268 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr1-8277 chr1 38740362 38740572 + 8.01 0.000 Intergenic Intergenic 119305 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr9-3624 chr9 90139731 90139941 + 8.01 0.000 Intergenic AluSp|SINE|Alu -98337 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chrX-4905 chrX 108070740 108070950 + 8.01 0.000 intron (NM_182607, intron 3 of 6) intron (NM_182607, intron 3 of 6) 20697 NM_002814 5716 Hs.522752 NM_002814 ENSG00000101843 PSMD10 dJ889N15.2|p28|p28(GANK) proteasome 26S subunit, non-ATPase 10 protein-coding chr10-7117 chr10 98038513 98038723 + 8.01 0.000 Intergenic Intergenic -7790 NM_001206528 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr8-3487 chr8 101159592 101159802 + 8.01 0.000 Intergenic Intergenic 45976 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr6-4929 chr6 98947003 98947213 + 8.01 0.000 intron (NM_001278716, intron 1 of 9) intron (NM_001278716, intron 1 of 9) 838 NR_103836 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr16-6716 chr16 72194723 72194933 + 8.01 0.000 Intergenic Intergenic -22378 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr22-2598 chr22 30882264 30882474 + 8.01 0.000 intron (NM_001282742, intron 1 of 11) intron (NM_001282742, intron 1 of 11) 688 NM_001282742 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr21-435 chr21 32495289 32495499 + 8.01 0.000 intron (NR_104472, intron 4 of 6) intron (NR_104472, intron 4 of 6) 82688 NM_001320744 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr13-1575 chr13 36778223 36778433 + 8.01 0.000 Intergenic L1PREC2|LINE|L1 -40874 NM_000538 5994 Hs.24422 NM_000538 ENSG00000133111 RFXAP - regulatory factor X associated protein protein-coding chr7-3662 chr7 44972257 44972467 + 8.01 0.000 intron (NM_033054, intron 5 of 21) intron (NM_033054, intron 5 of 21) 6653 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr13-4378 chr13 108335855 108336065 + 8.01 0.000 Intergenic Intergenic 66331 NM_001145645 10673 Hs.525157 NM_006573 ENSG00000102524 TNFSF13B BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4 TNF superfamily member 13b protein-coding chr1-6988 chr1 165601711 165601921 + 8.01 0.000 Intergenic Intergenic -19661 NR_026744 400794 Hs.374847 NR_026744 ENSG00000237463 LRRC52-AS1 - LRRC52 antisense RNA 1 ncRNA chr9-4257 chr9 94568610 94568820 + 8.01 0.000 TTS (NR_121566) TTS (NR_121566) 13670 NR_121566 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr3-5611 chr3 9565980 9566190 + 8.01 0.000 Intergenic AluY|SINE|Alu -12263 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr7-9708 chr7 155715085 155715295 + 8.01 0.000 intron (NM_053043, intron 8 of 17) intron (NM_053043, intron 8 of 17) 70529 NM_053043 155435 Hs.591815 NM_053043 ENSG00000184863 RBM33 PRR8 RNA binding motif protein 33 protein-coding chr6-5820 chr6 19175184 19175394 + 8.01 0.000 intron (NR_110860, intron 3 of 10) intron (NR_110860, intron 3 of 10) 5191 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr8-2715 chr8 99088336 99088546 + 8.01 0.000 intron (NR_047582, intron 4 of 8) intron (NR_047582, intron 4 of 8) 75175 NM_015243 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr5-4715 chr5 41759619 41759829 + 8.01 0.000 intron (NM_001364302, intron 13 of 15) intron (NM_001364302, intron 13 of 15) 83933 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr7-4381 chr7 76905877 76906087 + 8.01 0.000 Intergenic Eulor11|DNA|DNA -74840 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr10-2625 chr10 84552449 84552659 + 8.01 0.000 Intergenic Intergenic 127385 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr21-1816 chr21 39709623 39709833 + 8.01 0.000 Intergenic MER41A|LTR|ERV1 -35679 NM_001080444 150084 Hs.422120 NM_001080444 ENSG00000183067 IGSF5 GSF5|JAM4 immunoglobulin superfamily member 5 protein-coding chr7-5770 chr7 76108136 76108346 + 8.01 0.000 non-coding (NR_135079, exon 2 of 6) non-coding (NR_135079, exon 2 of 6) 521 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr19-4534 chr19 8935338 8935548 + 8.01 0.000 exon (NM_024690, exon 5 of 84) exon (NM_024690, exon 5 of 84) 45899 NM_024690 94025 Hs.432676 NM_024690 ENSG00000181143 MUC16 CA125 mucin 16, cell surface associated protein-coding chr10-5536 chr10 85910926 85911136 + 8.01 0.000 intron (NM_017551, intron 5 of 15) intron (NM_017551, intron 5 of 15) 333300 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr19-4741 chr19 27813327 27813537 + 8.01 0.000 intron (NR_146736, intron 2 of 2) intron (NR_146736, intron 2 of 2) -19492 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr4-3883 chr4 142044418 142044628 + 8.01 0.000 intron (NM_001331040, intron 25 of 25) intron (NM_001331040, intron 25 of 25) 407940 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr1-13200 chr1 208137089 208137299 + 8.01 0.000 intron (NM_025179, intron 4 of 31) intron (NM_025179, intron 4 of 31) 107190 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr7-6126 chr7 122595804 122596014 + 8.01 0.000 intron (NM_001167940, intron 6 of 29) intron (NM_001167940, intron 6 of 29) 103208 NM_139175 168433 Hs.126730 NM_139175 ENSG00000188050 RNF133 - ring finger protein 133 protein-coding chr8-4656 chr8 135667789 135667999 + 8.01 0.000 Intergenic Intergenic 210438 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr3-8668 chr3 180420216 180420426 + 8.01 0.000 intron (NR_132416, intron 1 of 1) L1M5|LINE|L1 6148 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr7-9283 chr7 125424713 125424923 + 8.01 0.000 Intergenic Intergenic -160527 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr2-12585 chr2 70558573 70558783 + 8.01 0.000 Intergenic Intergenic -4852 NM_003236 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr12-4878 chr12 63365588 63365798 + 8.01 0.000 Intergenic MLT1-int|LTR|ERVL-MaLR -212883 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr10-3614 chr10 93749097 93749307 + 8.01 0.000 Intergenic Intergenic -8607 NR_131777 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr4-3260 chr4 94788789 94788999 + 8.01 0.000 intron (NM_001203, intron 1 of 12) intron (NM_001203, intron 1 of 12) 30939 NM_001203 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr9-8786 chr9 134043569 134043779 + 8.01 0.000 intron (NM_007371, intron 7 of 11) intron (NM_007371, intron 7 of 11) -10616 NR_135126 100130548 Hs.671096 NR_135126 ENSG00000235138 LOC100130548 - uncharacterized LOC100130548 ncRNA chr9-3833 chr9 130168454 130168664 + 8.01 0.000 Intergenic Intergenic -3845 NM_014286 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr14-4307 chr14 21336406 21336616 + 8.01 0.000 intron (NM_020366, intron 20 of 23) AluJr|SINE|Alu 47508 NM_007192 11198 Hs.213724 NM_007192 ENSG00000092201 SUPT16H CDC68|FACTP140|SPT16|SPT16/CDC68 SPT16 homolog, facilitates chromatin remodeling subunit protein-coding chr15-4225 chr15 27075816 27076026 + 8.01 0.000 intron (NM_001270873, intron 3 of 5) intron (NM_001270873, intron 3 of 5) 85398 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr1-12314 chr1 246231624 246231834 + 8.01 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 185683 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr3-5034 chr3 32910987 32911197 + 8.01 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -40552 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr14-5204 chr14 95575973 95576183 + 8.01 0.000 intron (NR_146450, intron 1 of 2) intron (NR_146450, intron 1 of 2) 2516 NR_146449 100506999 Hs.112858 NR_146449 ENSG00000258390 LINC02318 - long intergenic non-protein coding RNA 2318 ncRNA chr5-7458 chr5 32276435 32276645 + 8.01 0.000 intron (NM_001294344, intron 2 of 13) intron (NM_001294344, intron 2 of 13) 36399 NM_001294343 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr6-2979 chr6 40475686 40475896 + 8.01 0.000 intron (NM_020737, intron 1 of 2) MIRb|SINE|MIR 97454 NR_160958 732253 Hs.180197 NM_001359094 TDRG1 LINC00532|lincRNA-NR_024015 testis development related 1 ncRNA chr7-7345 chr7 50971374 50971584 + 8.01 0.000 Intergenic Intergenic -178026 NM_001371008 chr7-4023 chr7 151428707 151428917 + 8.01 0.000 TTS (NM_144727) TTS (NM_144727) 4827 NR_037468 100500835 NR_037468 ENSG00000265810 MIR3907 - microRNA 3907 ncRNA chr7-5967 chr7 101156313 101156523 + 8.01 0.000 intron (NM_001283, intron 1 of 4) MIRb|SINE|MIR 1942 NM_001283 1174 Hs.489365 NM_001283 ENSG00000106367 AP1S1 AP19|CLAPS1|EKV3|MEDNIK|SIGMA1A adaptor related protein complex 1 subunit sigma 1 protein-coding chr7-7595 chr7 129429022 129429232 + 8.01 0.000 3' UTR (NM_015328, exon 17 of 17) 3' UTR (NM_015328, exon 17 of 17) -5305 NM_001134336 57464 Hs.489988 NM_020704 ENSG00000128578 STRIP2 FAM40B|FAR11B striatin interacting protein 2 protein-coding chr20-4367 chr20 56630704 56630914 + 8.01 0.000 intron (NM_003222, intron 1 of 6) CpG-17886 1503 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr16-3905 chr16 79954449 79954659 + 8.01 0.000 Intergenic L2c|LINE|L2 159305 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr11-5282 chr11 36447689 36447899 + 8.01 0.000 intron (NM_001160169, intron 6 of 6) intron (NM_001160169, intron 6 of 6) 46797 NM_001160169 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr12-6636 chr12 466420 466630 + 8.01 0.000 intron (NM_173593, intron 1 of 19) intron (NM_173593, intron 1 of 19) 6586 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr2-12456 chr2 59782770 59782980 + 8.01 0.000 Intergenic Intergenic 565167 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr9-4254 chr9 93239451 93239661 + 8.01 0.000 intron (NM_006648, intron 5 of 28) intron (NM_006648, intron 5 of 28) 54626 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr2-9423 chr2 232480099 232480309 + 8.01 0.000 exon (NM_001290787, exon 18 of 18) exon (NM_001290787, exon 18 of 18) 7630 NM_004826 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr15-4462 chr15 48395649 48395859 + 8.01 0.000 Intergenic Intergenic 63557 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr6-3881 chr6 55535588 55535798 + 8.01 0.000 intron (NM_001287746, intron 4 of 9) intron (NM_001287746, intron 4 of 9) 43521 NR_109867 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr5-8142 chr5 99934708 99934918 + 8.01 0.000 Intergenic Intergenic 400823 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr1-13555 chr1 7347789 7347999 + 8.01 0.000 intron (NM_001349608, intron 4 of 21) MLT1C|LTR|ERVL-MaLR 41860 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr7-5574 chr7 47483446 47483656 + 8.01 0.000 intron (NM_022748, intron 3 of 30) intron (NM_022748, intron 3 of 30) -18748 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr7-3222 chr7 151875620 151875830 + 8.01 0.000 intron (NM_016203, intron 1 of 15) CpG -1317 NR_038926 100505483 Hs.649054 NR_038926 PRKAG2-AS1 - PRKAG2 antisense RNA 1 ncRNA chr14-5424 chr14 104844889 104845099 + 8.01 0.000 Intergenic Intergenic -20274 NM_015005 283638 Hs.533721 NM_015005 ENSG00000099814 CEP170B CEP170R|FAM68C|KIAA0284 centrosomal protein 170B protein-coding chr17-5112 chr17 5638671 5638881 + 8.01 0.000 Intergenic Intergenic -54267 NM_033004 22861 Hs.652273 NM_014922 ENSG00000091592 NLRP1 AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family pyrin domain containing 1 protein-coding chr10-6415 chr10 13689350 13689560 + 8.01 0.000 intron (NM_001318336, intron 14 of 23) intron (NM_001318336, intron 14 of 23) 18112 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr6-5332 chr6 144969819 144970029 + 8.01 0.000 Intergenic Intergenic 564269 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr5-6154 chr5 41796041 41796251 + 8.01 0.000 intron (NM_001364299, intron 12 of 17) intron (NM_001364299, intron 12 of 17) 47511 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr21-888 chr21 46297827 46298037 + 8.01 0.000 TTS (NM_001314022) TTS (NM_001314022) 11590 NM_058181 54059 Hs.474066 NM_058181 ENSG00000182362 YBEY C21orf57 ybeY metalloendoribonuclease protein-coding chr1-7888 chr1 119802686 119802896 + 8.01 0.000 3' UTR (NM_001159353, exon 3 of 3) 3' UTR (NM_001159353, exon 3 of 3) 8669 NM_001159353 83998 Hs.660883 NM_032044 ENSG00000134193 REG4 GISP|REG-IV|RELP regenerating family member 4 protein-coding chr6-4460 chr6 35402408 35402618 + 8.01 0.000 intron (NM_001171818, intron 3 of 8) intron (NM_001171818, intron 3 of 8) -49848 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr2-4411 chr2 98092730 98092940 + 8.01 0.000 intron (NR_144297, intron 1 of 18) (TA)n|Simple_repeat|Simple_repeat 5668 NR_144296 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chrX-679 chrX 16996119 16996329 + 8.01 0.000 intron (NM_001080975, intron 1 of 17) intron (NM_001080975, intron 1 of 17) 49566 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr3-10046 chr3 104456947 104457157 + 8.01 0.000 Intergenic L1MB1|LINE|L1 -909661 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr2-8906 chr2 180583351 180583561 + 8.01 0.000 Intergenic MIR|SINE|MIR -108648 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr8-2742 chr8 103191097 103191307 + 8.01 0.000 intron (NM_001024372, intron 1 of 1) AluSx|SINE|Alu -19062 NR_109954 100499183 Hs.654812 NR_034092 ENSG00000247081 BAALC-AS1 FZD6-DT|lncFZD6 BAALC antisense RNA 1 ncRNA chr4-4329 chr4 33423764 33423974 + 8.01 0.000 Intergenic Charlie10a|DNA|hAT-Charlie 616024 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr1-15993 chr1 196739697 196739907 + 8.01 0.000 intron (NM_000186, intron 17 of 21) THE1C-int|LTR|ERVL-MaLR -34998 NM_021023 10878 Hs.709217 NM_021023 ENSG00000116785 CFHR3 CFHL3|DOWN16|FHR-3|FHR3|HLF4 complement factor H related 3 protein-coding chr15-4292 chr15 38214174 38214384 + 8.01 0.000 Intergenic Intergenic -38557 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr9-2455 chr9 19769193 19769403 + 8.01 0.000 intron (NM_020344, intron 1 of 9) L2|LINE|L2 17721 NM_001193288 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr1-3026 chr1 1133337 1133547 + 8.01 0.000 Intergenic Intergenic -3575 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA chr3-10909 chr3 171943834 171944044 + 8.01 0.000 Intergenic MIRb|SINE|MIR -43199 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA chr9-7837 chr9 83424951 83425161 + 8.01 0.000 intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 42686 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr12-6454 chr12 92377560 92377770 + 8.01 0.000 Intergenic Intergenic -43866 NR_027932 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 ncRNA chr2-9099 chr2 204791262 204791472 + 8.01 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 245892 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chrX-3641 chrX 98439718 98439928 + 8.01 0.000 Intergenic L1PB1|LINE|L1 -875288 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr2-6805 chr2 54052686 54052896 + 8.01 0.000 intron (NM_001320586, intron 3 of 6) intron (NM_001320586, intron 3 of 6) -62824 NM_001320589 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr22-2458 chr22 20276118 20276328 + 8.01 0.000 Intergenic Intergenic -7905 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chr21-1905 chr21 44688431 44688641 + 8.01 0.000 intron (NM_144991, intron 1 of 11) AluY|SINE|Alu -6373 NM_181686 353332 Hs.688628 NM_181686 ENSG00000187175 KRTAP12-1 KAP12.1|KRTAP12.1 keratin associated protein 12-1 protein-coding chr8-4923 chr8 100737268 100737478 + 8.01 0.000 Intergenic AluJb|SINE|Alu -15285 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr5-2306 chr5 56161042 56161252 + 8.01 0.000 intron (NM_024669, intron 5 of 11) MER5A|DNA|hAT-Charlie 72183 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr4-4786 chr4 102439931 102440141 + 8.01 0.000 intron (NR_136202, intron 2 of 4) intron (NR_136202, intron 2 of 4) -61323 NM_003998 4790 Hs.618430 NM_003998 ENSG00000109320 NFKB1 CVID12|EBP-1|KBF1|NF-kB1|NF-kappa-B1|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor kappa B subunit 1 protein-coding chr15-1266 chr15 84672327 84672537 + 8.01 0.000 intron (NM_001271919, intron 3 of 4) SVA_D|Retroposon|SVA -14233 NM_021077 4828 Hs.386470 NM_021077 ENSG00000197696 NMB - neuromedin B protein-coding chr2-9223 chr2 218102365 218102575 + 8.01 0.000 Intergenic Intergenic -22824 NM_001168298 3579 Hs.846 NM_001557 ENSG00000180871 CXCR2 CD182|CDw128b|CMKAR2|IL8R2|IL8RA|IL8RB C-X-C motif chemokine receptor 2 protein-coding chr18-1010 chr18 47818193 47818403 + 8.01 0.000 3' UTR (NM_005901, exon 11 of 11) 3' UTR (NM_005901, exon 11 of 11) 112361 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr20-2798 chr20 56531140 56531350 + 8.01 0.000 Intergenic L2c|LINE|L2 -2001 NM_001013646 388799 Hs.287759 NM_001013646 ENSG00000213714 FAM209B C20orf107|dJ1153D9.4 family with sequence similarity 209 member B protein-coding chr8-1299 chr8 79767963 79768173 + 8.01 0.000 promoter-TSS (NM_012258) promoter-TSS (NM_012258) -74 NR_125410 101927067 Hs.144030 NR_125410 ENSG00000272138 LINC01607 - long intergenic non-protein coding RNA 1607 ncRNA chr14-4582 chr14 49805082 49805292 + 8.01 0.000 intron (NM_001301732, intron 18 of 31) intron (NM_001301732, intron 18 of 31) 37034 NM_014315 23588 Hs.509264 NM_014315 ENSG00000165516 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding chr6-3878 chr6 53919917 53920127 + 8.01 0.000 intron (NM_018214, intron 12 of 13) intron (NM_018214, intron 12 of 13) -9960 NR_125842 101927189 Hs.453592 NR_125842 ENSG00000236740 LOC101927189 - uncharacterized LOC101927189 ncRNA chr11-2754 chr11 62012767 62012977 + 8.01 0.000 Intergenic Intergenic -45238 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr3-6887 chr3 154549343 154549553 + 8.01 0.000 Intergenic Intergenic -119258 NM_001038705 344758 Hs.376338 NM_001038705 ENSG00000174948 GPR149 IEDA|PGR10|R35 G protein-coupled receptor 149 protein-coding chr8-2187 chr8 119886284 119886494 + 8.01 0.000 intron (NM_001283012, intron 1 of 6) intron (NM_001283012, intron 1 of 6) 12667 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr3-10153 chr3 115246752 115246962 + 8.01 0.000 Intergenic Intergenic -99569 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chrX-5251 chrX 137962127 137962337 + 8.01 0.000 Intergenic L1PA6|LINE|L1 396105 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr4-6512 chr4 161656813 161657023 + 8.01 0.000 intron (NM_001128428, intron 6 of 14) intron (NM_001128428, intron 6 of 14) -365815 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr6-4515 chr6 37868378 37868588 + 8.01 0.000 intron (NM_021943, intron 1 of 5) intron (NM_021943, intron 1 of 5) 48756 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr19-5815 chr19 39208545 39208755 + 8.01 0.000 Intergenic Intergenic -4384 NM_001080468 342898 Hs.124123 NM_001080468 ENSG00000179751 SYCN INSSA1|SYL syncollin protein-coding chr1-14606 chr1 54557516 54557726 + 8.01 0.000 intron (NM_015547, intron 1 of 16) L1MA8|LINE|L1 9393 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr1-3999 chr1 162635480 162635690 + 8.01 0.000 intron (NM_006182, intron 1 of 17) intron (NM_006182, intron 1 of 17) 3121 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr3-2938 chr3 56132139 56132349 + 8.01 0.000 intron (NR_132749, intron 6 of 17) intron (NR_132749, intron 6 of 17) -279650 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr12-2993 chr12 120920785 120920995 + 8.01 0.000 Intergenic AluJr|SINE|Alu 16195 NR_131215 105500240 Hs.742757 NR_131215 XLOC_009911 - uncharacterized LOC105500240 ncRNA chr12-5243 chr12 108811261 108811471 + 8.01 0.000 intron (NM_018984, intron 5 of 14) intron (NM_018984, intron 5 of 14) 16185 NM_001161331 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr1-10624 chr1 179398353 179398563 + 8.01 0.000 intron (NR_073544, intron 11 of 25) L1PA13|LINE|L1 32414 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr3-6387 chr3 95048733 95048943 + 8.01 0.000 Intergenic Intergenic 110575 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr6-5585 chr6 35121360 35121570 + 8.01 0.000 intron (NM_001366331, intron 5 of 10) intron (NM_001366331, intron 5 of 10) 19874 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr1-6189 chr1 204885313 204885523 + 8.01 0.000 intron (NM_001160332, intron 1 of 27) intron (NM_001160332, intron 1 of 27) 56764 NM_001005388 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr19-4636 chr19 15198271 15198481 + 8.01 0.000 intron (NM_000435, intron 1 of 32) intron (NM_000435, intron 1 of 32) 2619 NM_000435 4854 Hs.8546 NM_000435 ENSG00000074181 NOTCH3 CADASIL|CADASIL1|CASIL|IMF2|LMNS notch receptor 3 protein-coding chr6-3466 chr6 1578166 1578376 + 8.01 0.000 Intergenic Intergenic -27260 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript ncRNA chr2-2627 chr2 74472697 74472907 + 8.01 0.000 promoter-TSS (NM_053050) promoter-TSS (NM_053050) -122 NM_053050 116540 Hs.534527 NM_053050 ENSG00000204822 MRPL53 L53MT mitochondrial ribosomal protein L53 protein-coding chr11-10190 chr11 95539011 95539221 + 8.01 0.000 Intergenic Intergenic 250666 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr3-6817 chr3 146506734 146506944 + 8.01 0.000 Intergenic LTR54|LTR|ERV1 -10848 NM_020359 57047 Hs.744414 NM_020359 ENSG00000163746 PLSCR2 - phospholipid scramblase 2 protein-coding chr10-5900 chr10 118742800 118743010 + 8.01 0.000 intron (NM_153810, intron 1 of 8) ERVL-E-int|LTR|ERVL 12065 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr1-9551 chr1 40600160 40600370 + 8.01 0.000 Intergenic L1MB3|LINE|L1 65417 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr6-3037 chr6 56101072 56101282 + 8.01 0.000 intron (NM_030820, intron 17 of 29) intron (NM_030820, intron 17 of 29) -9515 NM_001318754 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr2-13633 chr2 159832111 159832321 + 8.01 0.000 intron (NM_002349, intron 27 of 34) MER1B|DNA|hAT-Charlie -33961 NM_001198763 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chrX-2139 chrX 33416397 33416607 + 8.01 0.000 Intergenic L1PB4|LINE|L1 -77114 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr9-5995 chr9 134820977 134821187 + 8.01 0.000 intron (NM_001278074, intron 58 of 65) intron (NM_001278074, intron 58 of 65) 28287 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr1-10692 chr1 188963315 188963525 + 8.01 0.000 Intergenic Intergenic 1512590 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr1-11176 chr1 239881913 239882123 + 8.01 0.000 intron (NM_001347716, intron 7 of 7) AluSq2|SINE|Alu 17854 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr12-7263 chr12 52176077 52176287 + 8.01 0.000 intron (NM_182507, intron 4 of 8) MamGypsy2-I|LTR|Gypsy 15832 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr1-15109 chr1 100671774 100671984 + 8.01 0.000 Intergenic HAL1|LINE|L1 -24875 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr1-8282 chr1 39653832 39654042 + 8.01 0.000 Intergenic MER117|DNA|hAT-Charlie -14294 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr18-1233 chr18 47313981 47314191 + 8.01 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 28362 NR_147192 110175910 Hs.639112 NR_147192 ENSG00000267761 MIR4527HG - MIR4527 host gene ncRNA chr12-4595 chr12 32857114 32857324 + 8.01 0.000 intron (NM_001005242, intron 4 of 12) AluJo|SINE|Alu 39627 NM_004572 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr9-8679 chr9 130491525 130491735 + 8.01 0.000 intron (NM_054012, intron 12 of 14) intron (NM_054012, intron 12 of 14) 46669 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr16-6169 chr16 24425698 24425908 + 8.01 0.000 Intergenic L1MB3|LINE|L1 -113763 NM_006910 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding chr11-5609 chr11 117256457 117256667 + 8.01 0.000 intron (NM_001077239, intron 6 of 14) MLT1H1|LTR|ERVL-MaLR 23826 NM_001278249 257160 Hs.591934 NM_207343 ENSG00000167257 RNF214 - ring finger protein 214 protein-coding chr4-7661 chr4 85772707 85772917 + 8.01 0.000 intron (NM_001025616, intron 3 of 9) intron (NM_001025616, intron 3 of 9) -5986 NM_001346093 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr16-1950 chr16 30053715 30053925 + 8.01 0.000 intron (NM_001365305, intron 1 of 11) L2b|LINE|L2 730 NM_001365305 112694756 Hs.513490 NM_001365304 LOC112694756 ALDA|ALDOA uncharaterized LOC112694756 protein-coding chr6-5106 chr6 119880817 119881027 + 8.01 0.000 Intergenic Intergenic -134257 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr17-4839 chr17 60043444 60043654 + 8.01 0.000 promoter-TSS (NR_039890) promoter-TSS (NR_039890) -444 NR_039890 100616210 NR_039890 ENSG00000264049 MIR4737 - microRNA 4737 ncRNA chr11-6070 chr11 32754093 32754303 + 8.01 0.000 intron (NM_001008391, intron 2 of 17) L1MEd|LINE|L1 40460 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr7-4463 chr7 134063133 134063343 + 8.01 0.000 intron (NM_021807, intron 17 of 17) L2c|LINE|L2 -64102 NM_001365700 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr14-4052 chr14 56401636 56401846 + 8.01 0.000 Intergenic Intergenic -112590 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr16-4560 chr16 66728298 66728508 + 8.01 0.000 intron (NM_006141, intron 9 of 12) intron (NM_006141, intron 9 of 12) 23206 NM_006141 1783 Hs.369068 NM_006141 ENSG00000135720 DYNC1LI2 DNCLI2|LIC2 dynein cytoplasmic 1 light intermediate chain 2 protein-coding chr17-5892 chr17 72590601 72590811 + 8.01 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 2098 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr17-3470 chr17 42763401 42763611 + 8.01 0.000 TTS (NM_005854) TTS (NM_005854) -2249 NR_024462 100190938 Hs.655265 NR_024461 ENSG00000197291 RAMP2-AS1 - RAMP2 antisense RNA 1 ncRNA chr6-8601 chr6 167682091 167682301 + 8.01 0.000 intron (NR_117092, intron 3 of 3) intron (NR_117092, intron 3 of 3) 1591 NR_117092 441178 Hs.628956 NM_001025489 ENSG00000203688 LINC02487 - long intergenic non-protein coding RNA 2487 ncRNA chr10-8767 chr10 104466557 104466767 + 8.01 0.000 Intergenic HERVL-int|LTR|ERVL 13613 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr8-5621 chr8 100086423 100086633 + 8.01 0.000 intron (NM_015668, intron 3 of 27) L1PA16|LINE|L1 19098 NM_001286693 26166 Hs.120021 NM_015668 ENSG00000132554 RGS22 CT145|PRTD-NY2 regulator of G protein signaling 22 protein-coding chr9-4170 chr9 16591086 16591296 + 8.01 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -135623 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr14-2860 chr14 30890584 30890794 + 8.01 0.000 promoter-TSS (NR_038356) promoter-TSS (NR_038356) -881 NR_038356 100506071 Hs.729195 NR_038356 ENSG00000258525 LOC100506071 - uncharacterized LOC100506071 ncRNA chr1-9880 chr1 67273267 67273477 + 8.01 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -33992 NM_001258216 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr5-5756 chr5 172506941 172507151 + 8.01 0.000 Intergenic L2b|LINE|L2 51968 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr8-3667 chr8 14461121 14461331 + 8.01 0.000 intron (NM_001322881, intron 2 of 6) intron (NM_001322881, intron 2 of 6) 392284 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr3-9304 chr3 43367190 43367400 + 8.01 0.000 intron (NM_001346463, intron 12 of 12) MIRb|SINE|MIR -15333 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chrX-4480 chrX 63712843 63713053 + 8.01 0.000 intron (NM_001173479, intron 1 of 8) intron (NM_001173479, intron 1 of 8) -41446 NR_138419 100874355 Hs.671524 NR_138419 ENSG00000231729 ARHGEF9-IT1 - ARHGEF9 intronic transcript 1 ncRNA chr14-4167 chr14 78282119 78282329 + 8.01 0.000 intron (NM_001366425, intron 3 of 19) intron (NM_001366425, intron 3 of 19) 111851 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr4-7768 chr4 94634194 94634404 + 8.01 0.000 intron (NM_006457, intron 8 of 12) L2a|LINE|L2 123234 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr7-9243 chr7 121681820 121682030 + 8.01 0.000 Intergenic L2b|LINE|L2 -191236 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr20-2337 chr20 11539234 11539444 + 8.01 0.000 Intergenic MamGypLTR3a|LTR|Gypsy -265956 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr8-4234 chr8 88654939 88655149 + 8.01 0.000 Intergenic AluJr|SINE|Alu -327561 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr1-4889 chr1 35452282 35452492 + 8.01 0.000 intron (NM_024874, intron 12 of 20) intron (NM_024874, intron 12 of 20) -86310 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr16-6772 chr16 77137084 77137294 + 8.01 0.000 Intergenic Intergenic -54001 NM_014940 22879 Hs.513743 NM_014940 ENSG00000103111 MON1B HSRG1|SAND2|SRG1 MON1 homolog B, secretory trafficking associated protein-coding chr8-3737 chr8 22233372 22233582 + 8.01 0.000 Intergenic Intergenic -1125 NM_001363312 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr10-5905 chr10 118968248 118968458 + 8.01 0.000 Intergenic Intergenic -61361 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr6-7439 chr6 54587393 54587603 + 8.01 0.000 Intergenic Intergenic -259273 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr19-3695 chr19 19340989 19341199 + 8.01 0.000 intron (NM_015329, intron 6 of 18) intron (NM_015329, intron 6 of 18) 20265 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chr8-6353 chr8 52559672 52559882 + 8.01 0.000 intron (NM_207413, intron 1 of 4) intron (NM_207413, intron 1 of 4) 5653 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr20-1090 chr20 62459537 62459747 + 8.01 0.000 Intergenic (CCTC)n|Simple_repeat|Simple_repeat 16353 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr1-8322 chr1 51297035 51297245 + 8.01 0.000 intron (NM_001080494, intron 12 of 17) intron (NM_001080494, intron 12 of 17) 821 NM_001297667 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr7-9498 chr7 137757316 137757526 + 8.01 0.000 intron (NM_001321708, intron 1 of 32) L2|LINE|L2 88911 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr4-4100 chr4 5874928 5875138 + 8.01 0.000 intron (NM_001014809, intron 1 of 13) intron (NM_001014809, intron 1 of 13) 12780 NM_001288662 1400 Hs.135270 NM_001313 ENSG00000072832 CRMP1 CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 collapsin response mediator protein 1 protein-coding chr17-5425 chr17 35131121 35131331 + 8.01 0.000 TTS (NM_001014445) TTS (NM_001014445) 9611 NM_017559 54752 Hs.120369 NM_017559 ENSG00000073598 FNDC8 - fibronectin type III domain containing 8 protein-coding chr6-4695 chr6 55471862 55472072 + 8.01 0.000 intron (NR_109869, intron 3 of 4) L1ME3A|LINE|L1 107247 NR_109867 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr20-3030 chr20 60530014 60530224 + 8.01 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -34443 NR_039653 100616440 NR_039653 ENSG00000265617 MIR548AG2 - microRNA 548ag-2 ncRNA chr4-3606 chr4 7667353 7667563 + 8.01 0.000 intron (NM_020777, intron 8 of 26) L2b|LINE|L2 -86632 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr17-3647 chr17 5249532 5249742 + 8.01 0.000 Intergenic Intergenic -14777 NM_207103 388325 Hs.462080 NM_207103 ENSG00000161929 SCIMP C17orf87|UNQ5783 SLP adaptor and CSK interacting membrane protein protein-coding chr16-4593 chr16 67861042 67861252 + 8.01 0.000 intron (NM_001322038, intron 2 of 5) MIRb|SINE|MIR -11905 NM_014329 23644 Hs.75682 NM_014329 ENSG00000038358 EDC4 GE1|Ge-1|HEDL5|HEDLS|RCD-8|RCD8 enhancer of mRNA decapping 4 protein-coding chr3-8326 chr3 67172363 67172573 + 8.01 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -52996 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr8-4519 chr8 122447436 122447646 + 8.01 0.000 intron (NR_131202, intron 2 of 3) intron (NR_131202, intron 2 of 3) 121103 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr1-11613 chr1 230774382 230774592 + 8.01 0.000 intron (NM_016452, intron 7 of 18) intron (NM_016452, intron 7 of 18) 27099 NM_006615 10753 Hs.498021 NM_006615 ENSG00000135773 CAPN9 GC36|nCL-4 calpain 9 protein-coding chr3-7153 chr3 185914514 185914724 + 8.01 0.000 TTS (NM_001243879) TTS (NM_001243879) 23395 NM_004593 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr15-2929 chr15 46390486 46390696 + 8.01 0.000 Intergenic Intergenic 685396 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr13-1745 chr13 109645796 109646006 + 8.01 0.000 Intergenic Intergenic -82373 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr15-4446 chr15 46554309 46554519 + 8.01 0.000 Intergenic L1MC4|LINE|L1 -629675 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr6-6318 chr6 44956679 44956889 + 8.01 0.000 intron (NM_181356, intron 9 of 12) intron (NM_181356, intron 9 of 12) 240986 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr15-3804 chr15 72390256 72390466 + 8.01 0.000 Intergenic Intergenic -7944 NR_148418 338949 Hs.446069 NM_001080462 ENSG00000187806 TMEM202 - transmembrane protein 202 protein-coding chr15-4218 chr15 26705186 26705396 + 8.01 0.000 intron (NM_001278631, intron 3 of 9) MLT1A1|LTR|ERVL-MaLR 11474 NM_001191320 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr22-2020 chr22 37108133 37108343 + 8.01 0.000 intron (NM_001289000, intron 1 of 18) L2b|LINE|L2 1199 NM_001289001 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr10-8978 chr10 119492608 119492818 + 8.01 0.000 Intergenic MIRb|SINE|MIR 43820 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr2-14748 chr2 239593878 239594088 + 8.01 0.000 Intergenic Intergenic -168877 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr10-8139 chr10 70474531 70474741 + 8.01 0.000 Intergenic MER112|DNA|hAT-Charlie -4131 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr1-10409 chr1 157157814 157158024 + 8.01 0.000 Intergenic Intergenic -19328 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr6-7099 chr6 34340920 34341130 + 8.01 0.000 intron (NM_001202470, intron 6 of 8) intron (NM_001202470, intron 6 of 8) 51644 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr7-5282 chr7 22972534 22972744 + 8.01 0.000 intron (NM_032581, intron 7 of 10) intron (NM_032581, intron 7 of 10) 41491 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr2-9943 chr2 240955294 240955504 + 8.01 0.000 non-coding (NR_033841, exon 9 of 9) non-coding (NR_033841, exon 9 of 9) 12052 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr12-1928 chr12 98769127 98769337 + 8.01 0.000 intron (NM_001352221, intron 8 of 9) intron (NM_001352221, intron 8 of 9) 123932 NM_181869 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr20-2720 chr20 48632019 48632229 + 8.01 0.000 intron (NM_020820, intron 35 of 39) MIRb|SINE|MIR 195875 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr7-3602 chr7 30914954 30915164 + 8.01 0.000 intron (NM_198098, intron 1 of 3) MIRc|SINE|MIR 3206 NM_001329872 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr13-4159 chr13 86112313 86112523 + 8.01 0.000 Intergenic MER67D|LTR|ERV1 -312999 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr1-8516 chr1 155008215 155008425 + 8.01 0.000 intron (NR_049765, intron 2 of 3) intron (NR_049765, intron 2 of 3) 5690 NR_046206 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr1-16636 chr1 239961916 239962126 + 8.01 0.000 Intergenic MIR|SINE|MIR -45503 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chr2-14002 chr2 191013014 191013224 + 8.01 0.000 intron (NM_007315, intron 2 of 24) L2a|LINE|L2 1131 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr4-5328 chr4 182400902 182401112 + 8.01 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 157605 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr21-873 chr21 42147650 42147860 + 8.01 0.000 Intergenic Intergenic -39221 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr12-6612 chr12 129738373 129738583 + 8.01 0.000 intron (NM_133448, intron 1 of 8) intron (NM_133448, intron 1 of 8) 165547 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr8-2672 chr8 86188387 86188597 + 8.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 41889 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr3-7608 chr3 15367051 15367261 + 8.01 0.000 Intergenic Intergenic -25776 NM_001018009 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr6-7404 chr6 52025417 52025627 + 8.01 0.000 exon (NM_170724, exon 32 of 61) exon (NM_170724, exon 32 of 61) 62091 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding chr17-5503 chr17 42023537 42023747 + 8.01 0.000 intron (NM_001144927, intron 3 of 3) intron (NM_001144927, intron 3 of 3) 3552 NM_017595 28511 Hs.632252 NM_017595 ENSG00000168256 NKIRAS2 KBRAS2|kappaB-Ras2 NFKB inhibitor interacting Ras like 2 protein-coding chr3-10335 chr3 127222947 127223157 + 8.01 0.000 Intergenic Intergenic 29921 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr20-2526 chr20 35090895 35091105 + 8.01 0.000 intron (NM_199368, intron 1 of 18) intron (NM_199368, intron 1 of 18) 1807 NM_015638 26133 Hs.168073 NM_015638 ENSG00000100991 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel subfamily C member 4 associated protein protein-coding chr9-8464 chr9 123422143 123422353 + 8.01 0.000 intron (NM_001352968, intron 18 of 18) intron (NM_001352968, intron 18 of 18) -19645 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr2-9293 chr2 222038417 222038627 + 8.01 0.000 Intergenic Intergenic -259625 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr12-4100 chr12 57491495 57491705 + 8.01 0.000 intron (NM_004990, intron 7 of 20) L2b|LINE|L2 -2776 NM_001319850 64333 Hs.437126 NM_032496 ENSG00000123329 ARHGAP9 10C|RGL1 Rho GTPase activating protein 9 protein-coding chr5-5516 chr5 143577563 143577773 + 8.01 0.000 Intergenic Intergenic -102192 NR_049829 100846991 NR_049829 ENSG00000266478 MIR5197 - microRNA 5197 ncRNA chr2-4925 chr2 160242103 160242313 + 8.01 0.000 Intergenic L2a|LINE|L2 29687 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chr10-7635 chr10 24195538 24195748 + 8.01 0.000 intron (NM_001098500, intron 2 of 18) intron (NM_001098500, intron 2 of 18) -13148 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr6-6670 chr6 163903744 163903954 + 8.01 0.000 Intergenic Intergenic -232365 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr6-4286 chr6 13404322 13404532 + 8.01 0.000 intron (NM_018988, intron 1 of 1) MIRc|SINE|MIR 3710 NM_001242630 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr2-10391 chr2 179432304 179432514 + 8.01 0.000 Intergenic Intergenic 130179 NR_148055 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr5-3993 chr5 16521392 16521602 + 8.01 0.000 intron (NM_001034850, intron 3 of 8) intron (NM_001034850, intron 3 of 8) -12499 NM_019000 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr2-8890 chr2 178070777 178070987 + 8.01 0.000 intron (NM_001077197, intron 2 of 20) intron (NM_001077197, intron 2 of 20) 1895 NM_016953 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr17-8221 chr17 64349839 64350049 + 8.01 0.000 intron (NM_000442, intron 12 of 15) intron (NM_000442, intron 12 of 15) 40916 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr4-6033 chr4 2125612 2125822 + 8.01 0.000 intron (NM_181808, intron 19 of 25) intron (NM_181808, intron 19 of 25) 66390 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chrX-4389 chrX 51420314 51420524 + 8.01 0.000 Intergenic MER101-int|LTR|ERV1 13471 NM_203407 340602 Hs.97053 NM_203407 ENSG00000187690 EZHIP CXorf67 EZH inhibitory protein protein-coding chr17-8053 chr17 51109951 51110161 + 8.01 0.000 intron (NM_001130527, intron 1 of 29) L1MC4|LINE|L1 10812 NM_001130528 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr16-4570 chr16 67192857 67193067 + 8.01 0.000 intron (NM_001950, intron 2 of 9) intron (NM_001950, intron 2 of 9) 807 NM_001950 1874 Hs.108371 NM_001950 ENSG00000205250 E2F4 E2F-4 E2F transcription factor 4 protein-coding chr10-8057 chr10 65429385 65429595 + 8.01 0.000 Intergenic LTR12C|LTR|ERV1 -141935 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr21-486 chr21 7953171 7953381 + 8.01 0.000 Intergenic (CATTC)n|Satellite|Satellite -123644 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chr4-6842 chr4 8618438 8618648 + 8.01 0.000 intron (NM_001014447, intron 10 of 10) intron (NM_001014447, intron 10 of 10) 25778 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr19-4708 chr19 18888529 18888739 + 8.01 0.000 intron (NM_021267, intron 2 of 7) AluSp|SINE|Alu 7524 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr19-3002 chr19 45396715 45396925 + 8.01 0.000 exon (NM_001142502, exon 4 of 13) exon (NM_001142502, exon 4 of 13) 8249 NM_006663 10848 Hs.466937 NM_006663 ENSG00000104881 PPP1R13L IASPP|NKIP1|RAI|RAI4 protein phosphatase 1 regulatory subunit 13 like protein-coding chr6-7042 chr6 26021485 26021695 + 8.01 0.000 promoter-TSS (NM_003538) promoter-TSS (NM_003538) -89 NM_003538 8359 Hs.248178 NM_003538 ENSG00000278637 HIST1H4A H4FA histone cluster 1 H4 family member a protein-coding chr8-3229 chr8 139024789 139024999 + 8.01 0.000 Intergenic Intergenic -110853 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr1-5743 chr1 101514898 101515108 + 8.01 0.000 Intergenic L1MA4|LINE|L1 191166 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr1-8173 chr1 18627581 18627791 + 8.01 0.000 Intergenic Intergenic -3160 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr10-8593 chr10 96462683 96462893 + 8.01 0.000 intron (NM_012465, intron 2 of 20) Tigger17a|DNA|TcMar-Tigger 51138 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr5-5637 chr5 155520743 155520953 + 8.01 0.000 Intergenic L1MA3|LINE|L1 507093 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr2-5380 chr2 100242894 100243104 + 8.01 0.000 intron (NR_103730, intron 1 of 2) OldhAT1|DNA|hAT-Ac 34745 NR_103730 150577 Hs.434127 NM_001102655 ENSG00000232084 LINC01104 - long intergenic non-protein coding RNA 1104 ncRNA chr4-4728 chr4 91834530 91834740 + 8.01 0.000 Intergenic Intergenic 442667 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr11-5329 chr11 59505079 59505289 + 8.01 0.000 TTS (NM_001004706) TTS (NM_001004706) 1608 NM_001004706 219986 Hs.553651 NM_001004706 ENSG00000176200 OR4D11 OR4D11P olfactory receptor family 4 subfamily D member 11 protein-coding chr16-4855 chr16 88142297 88142507 + 8.01 0.000 Intergenic Intergenic -41417 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr4-7858 chr4 102888942 102889152 + 8.01 0.000 3' UTR (NM_001008388, exon 3 of 3) 3' UTR (NM_001008388, exon 3 of 3) 20055 NM_001008388 493856 Hs.444955 NM_001008388 ENSG00000145354 CISD2 ERIS|Miner1|NAF-1|WFS2|ZCD2 CDGSH iron sulfur domain 2 protein-coding chr10-3268 chr10 126671535 126671745 + 8.01 0.000 Intergenic Intergenic -1130 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr1-9631 chr1 46433093 46433303 + 8.01 0.000 promoter-TSS (NR_045483) promoter-TSS (NR_045483) -629 NR_045483 729041 Hs.170205 NR_045483 FAAHP1 FAAH-OUT|FAAHOUT|LINC00505 fatty acid amide hydrolase pseudogene 1 pseudo chr16-6743 chr16 74917183 74917393 + 8.01 0.000 intron (NM_001324172, intron 11 of 13) intron (NM_001324172, intron 11 of 13) 67835 NM_030581 79726 Hs.280951 NM_030581 ENSG00000103091 WDR59 CDW12|FP977|p90-120 WD repeat domain 59 protein-coding chr8-4395 chr8 104518073 104518283 + 8.01 0.000 intron (NM_001135703, intron 1 of 5) intron (NM_001135703, intron 1 of 5) -33713 NR_030330 693127 NR_030330 ENSG00000208032 MIR548A3 MIRN548A3 microRNA 548a-3 ncRNA chr10-4511 chr10 89744101 89744311 + 8.01 0.000 intron (NM_016195, intron 22 of 32) L1MD3|LINE|L1 42616 NM_016195 9585 Hs.240 NM_016195 ENSG00000138182 KIF20B CT90|KRMP1|MPHOSPH1|MPP-1|MPP1 kinesin family member 20B protein-coding chr1-10688 chr1 187390986 187391196 + 8.01 0.000 Intergenic Intergenic -52537 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chrX-5357 chrX 149626958 149627168 + 8.01 0.000 intron (NM_032508, intron 1 of 6) LTR5B|LTR|ERVK 4729 NM_032508 84548 Hs.522172 NM_032508 ENSG00000269556 TMEM185A CXorf13|FAM11A|FRAXF|ee3 transmembrane protein 185A protein-coding chr5-5224 chr5 115831229 115831439 + 8.01 0.000 non-coding (NR_033363, exon 5 of 5) non-coding (NR_033363, exon 5 of 5) 10231 NM_001277783 9140 Hs.264482 NM_004707 ENSG00000145782 ATG12 APG12|APG12L|FBR93|HAPG12 autophagy related 12 protein-coding chr9-8666 chr9 130193026 130193236 + 7.89 0.000 intron (NM_014286, intron 1 of 7) intron (NM_014286, intron 1 of 7) -7269 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chrX-4700 chrX 86611457 86611667 + 7.89 0.000 intron (NM_001139515, intron 3 of 11) L1M1|LINE|L1 348594 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr1-14691 chr1 62682648 62682858 + 7.89 0.000 intron (NM_001367561, intron 1 of 49) intron (NM_001367561, intron 1 of 49) 5615 NM_001272001 85440 Hs.744927 NM_033407 ENSG00000116641 DOCK7 EIEE23|ZIR2 dedicator of cytokinesis 7 protein-coding chr22-2254 chr22 29504171 29504381 + 7.89 0.000 Intergenic Intergenic 24058 NM_021076 4744 Hs.198760 NM_021076 ENSG00000100285 NEFH CMT2CC|NFH neurofilament heavy protein-coding chr4-8448 chr4 155056235 155056445 + 7.89 0.000 Intergenic Intergenic -152296 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr12-2637 chr12 132414136 132414346 + 7.89 0.000 Intergenic CpG -75910 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr6-8510 chr6 158979461 158979671 + 7.89 0.000 intron (NM_001346418, intron 4 of 5) MIRc|SINE|MIR 20621 NR_144434 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke head 3 protein-coding chr4-5114 chr4 149581698 149581908 + 7.89 0.000 intron (NM_001363507, intron 9 of 13) intron (NM_001363507, intron 9 of 13) 234040 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr12-3968 chr12 12734047 12734257 + 7.89 0.000 intron (NM_001130415, intron 1 of 1) intron (NM_001130415, intron 1 of 1) 8235 NM_001130415 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chr10-8463 chr10 87594693 87594903 + 7.89 0.000 Intergenic Intergenic -65080 NM_004670 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr4-6810 chr4 7833311 7833521 + 7.89 0.000 intron (NM_198595, intron 6 of 16) L1PB1|LINE|L1 38892 NM_001371090 chr8-6486 chr8 63288374 63288584 + 7.89 0.000 Intergenic Intergenic 119476 NM_001277818 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 - YTH N6-methyladenosine RNA binding protein 3 protein-coding chr2-7146 chr2 196355772 196355982 + 7.89 0.000 intron (NM_020760, intron 2 of 28) L2a|LINE|L2 6300 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr2-11636 chr2 5386648 5386858 + 7.89 0.000 Intergenic Intergenic 304365 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr21-649 chr21 30132580 30132790 + 7.89 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 34120 NM_012131 26285 Hs.258589 NM_012131 ENSG00000156282 CLDN17 - claudin 17 protein-coding chr9-7961 chr9 91647324 91647534 + 7.89 0.000 Intergenic L1MEf|LINE|L1 -11084 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr3-8511 chr3 133943883 133944093 + 7.89 0.000 intron (NM_005630, intron 10 of 13) (GCCT)n|Simple_repeat|Simple_repeat -14176 NR_161373 80111 Hs.287691 NM_025041 ENSG00000174640 C3orf36 - chromosome 3 open reading frame 36 ncRNA chr9-5469 chr9 99228151 99228361 + 7.89 0.000 intron (NM_006808, intron 3 of 3) intron (NM_006808, intron 3 of 3) 5974 NM_006808 10952 Hs.191887 NM_006808 ENSG00000106803 SEC61B - SEC61 translocon beta subunit protein-coding chr6-7741 chr6 91017187 91017397 + 7.89 0.000 Intergenic MSTD|LTR|ERVL-MaLR -430220 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr7-9556 chr7 141475799 141476009 + 7.89 0.000 3' UTR (NM_001195278, exon 4 of 4) 3' UTR (NM_001195278, exon 4 of 4) -75506 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr10-5638 chr10 96752760 96752970 + 7.89 0.000 Intergenic MER20B|DNA|hAT-Charlie 2599 NR_026712 728658 Hs.645344 NR_026712 ENSG00000236552 RPL13AP5 RPL13A_8_1086|bA196N24.2 ribosomal protein L13a pseudogene 5 pseudo chr19-2118 chr19 1789619 1789829 + 7.89 0.000 exon (NM_138813, exon 23 of 29) exon (NM_138813, exon 23 of 29) 22552 NM_001178002 148229 Hs.306212 NM_138813 ENSG00000130270 ATP8B3 ATPIK ATPase phospholipid transporting 8B3 protein-coding chr7-8930 chr7 95809299 95809509 + 7.89 0.000 intron (NM_004411, intron 2 of 16) intron (NM_004411, intron 2 of 16) 36898 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr4-2073 chr4 20254796 20255006 + 7.89 0.000 intron (NM_001289135, intron 1 of 35) CpG 2996 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr22-2234 chr22 24749981 24750191 + 7.89 0.000 intron (NM_001008496, intron 9 of 20) intron (NM_001008496, intron 9 of 20) -14415 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo chr1-7397 chr1 31744184 31744394 + 7.89 0.000 exon (NM_001364857, exon 6 of 33) exon (NM_001364857, exon 6 of 33) 14446 NR_036216 100423028 NR_036216 ENSG00000266580 MIR4254 - microRNA 4254 ncRNA chr17-8360 chr17 74199871 74200081 + 7.89 0.000 Intergenic Intergenic -3702 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr10-7645 chr10 24992580 24992790 + 7.89 0.000 intron (NR_072993, intron 1 of 2) MLT1I|LTR|ERVL-MaLR 23473 NR_072993 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr2-8902 chr2 179991471 179991681 + 7.89 0.000 intron (NM_020943, intron 2 of 19) intron (NM_020943, intron 2 of 19) 15721 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr2-8672 chr2 149529096 149529306 + 7.89 0.000 Intergenic Intergenic -58157 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr4-4851 chr4 110993980 110994190 + 7.89 0.000 Intergenic Intergenic -133438 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr2-10023 chr2 26463979 26464189 + 7.89 0.000 exon (NM_001287489, exon 40 of 46) exon (NM_001287489, exon 40 of 46) 14040 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr2-8075 chr2 74206482 74206692 + 7.89 0.000 intron (NM_006636, intron 2 of 7) intron (NM_006636, intron 2 of 7) 7972 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr5-8138 chr5 99727345 99727555 + 7.89 0.000 Intergenic L1MA9|LINE|L1 193460 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr11-4040 chr11 11727353 11727563 + 7.89 0.000 Intergenic Intergenic 55764 NR_107037 102465870 NR_107037 ENSG00000278529 MIR8070 hsa-mir-8070 microRNA 8070 ncRNA chr22-2651 chr22 35663377 35663587 + 7.89 0.000 3' UTR (NM_030641, exon 3 of 3) 3' UTR (NM_030641, exon 3 of 3) 15036 NM_030641 80830 Hs.257352 NM_030641 ENSG00000221963 APOL6 APOL-VI|APOLVI apolipoprotein L6 protein-coding chr11-4186 chr11 60973905 60974115 + 7.89 0.000 intron (NM_001254751, intron 1 of 10) intron (NM_001254751, intron 1 of 10) 2330 NM_001254751 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr2-9055 chr2 200557414 200557624 + 7.89 0.000 intron (NM_001160046, intron 5 of 8) MER41B|LTR|ERV1 -28495 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr6-5798 chr6 11195049 11195259 + 7.89 0.000 intron (NM_001271033, intron 1 of 5) intron (NM_001271033, intron 1 of 5) 37514 NM_006403 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr12-4868 chr12 62042638 62042848 + 7.89 0.000 intron (NM_178539, intron 1 of 4) intron (NM_178539, intron 1 of 4) 150096 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr6-7868 chr6 106731370 106731580 + 7.89 0.000 intron (NR_033557, intron 4 of 6) intron (NR_033557, intron 4 of 6) 35990 NR_149100 105377926 Hs.635821 NR_149100 ENSG00000229654 LINC02526 - long intergenic non-protein coding RNA 2526 ncRNA chr6-8118 chr6 127278210 127278420 + 7.89 0.000 intron (NM_001242852, intron 1 of 4) L1MB4|LINE|L1 11477 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr3-7170 chr3 186854556 186854766 + 7.89 0.000 exon (NM_004797, exon 3 of 3) exon (NM_004797, exon 3 of 3) 6707 NR_046662 100874095 Hs.638968 NR_046662 ENSG00000226482 ADIPOQ-AS1 - ADIPOQ antisense RNA 1 ncRNA chr12-7711 chr12 91127927 91128137 + 7.89 0.000 Intergenic L2a|LINE|L2 -16538 NM_002345 4060 Hs.406475 NM_002345 ENSG00000139329 LUM LDC|SLRR2D lumican protein-coding chr16-5480 chr16 4748480 4748690 + 7.89 0.000 3' UTR (NM_021646, exon 6 of 6) 3' UTR (NM_021646, exon 6 of 6) 14048 NM_139170 146562 Hs.602738 NM_139170 ENSG00000166246 C16orf71 - chromosome 16 open reading frame 71 protein-coding chr16-4443 chr16 53527823 53528033 + 7.89 0.000 Intergenic AluSx|SINE|Alu -24624 NM_001012398 64400 Hs.380897 NM_022476 ENSG00000166971 AKTIP FT1|FTS AKT interacting protein protein-coding chr3-10093 chr3 109961092 109961302 + 7.89 0.000 Intergenic Intergenic 358369 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr14-4103 chr14 68286837 68287047 + 7.89 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 341845 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chrX-3608 chrX 84250364 84250574 + 7.89 0.000 Intergenic (ACA)n|Simple_repeat|Simple_repeat -24641 NR_031690 100302191 NR_031690 ENSG00000221494 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA chr11-6905 chr11 106986358 106986568 + 7.89 0.000 intron (NM_001256424, intron 1 of 8) intron (NM_001256424, intron 1 of 8) 32013 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chrX-2136 chrX 33045029 33045239 + 7.89 0.000 intron (NM_000109, intron 1 of 78) MIRb|SINE|MIR 83293 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr19-4111 chr19 17543212 17543422 + 7.89 0.000 exon (NM_001321827, exon 11 of 15) exon (NM_001321827, exon 11 of 15) -12332 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr4-7980 chr4 113740532 113740742 + 7.89 0.000 intron (NM_001321585, intron 2 of 19) intron (NM_001321585, intron 2 of 19) 21101 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr13-2609 chr13 75521667 75521877 + 7.89 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 16100 NM_203497 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding chr13-4095 chr13 78096248 78096458 + 7.89 0.000 intron (NR_047001, intron 1 of 5) MLT2B2|LTR|ERVL 41498 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr14-3421 chr14 96473734 96473944 + 7.89 0.000 intron (NM_001350891, intron 13 of 16) intron (NM_001350891, intron 13 of 16) 28487 NR_122121 730202 Hs.647565 NR_122121 LOC730202 - uncharacterized LOC730202 ncRNA chr3-3046 chr3 125039275 125039485 + 7.89 0.000 intron (NM_020733, intron 1 of 16) intron (NM_020733, intron 1 of 16) 16617 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr10-7068 chr10 87340320 87340530 + 7.89 0.000 intron (NR_024397, intron 1 of 5) L1ME1|LINE|L1 -1986 NR_029408 439994 Hs.651188 NR_029408 ENSG00000224914 LINC00863 - long intergenic non-protein coding RNA 863 ncRNA chr1-9346 chr1 28768485 28768695 + 7.89 0.000 intron (NM_001173128, intron 5 of 5) intron (NM_001173128, intron 5 of 5) 31650 NM_001172828 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr1-14171 chr1 32774255 32774465 + 7.89 0.000 TTS (NM_003680) TTS (NM_003680) 8733 NM_001198972 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr1-14255 chr1 36775048 36775258 + 7.89 0.000 Intergenic Intergenic 259362 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr4-5335 chr4 183310510 183310720 + 7.89 0.000 intron (NM_024949, intron 21 of 22) AluJr|SINE|Alu 10159 NM_001111319 53842 Hs.333179 NM_001111319 ENSG00000177300 CLDN22 CLDN21 claudin 22 protein-coding chr16-6347 chr16 50395844 50396054 + 7.89 0.000 promoter-TSS (NR_146572) promoter-TSS (NR_146572) -816 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA chr7-4087 chr7 26302260 26302470 + 7.89 0.000 intron (NM_001318199, intron 1 of 6) intron (NM_001318199, intron 1 of 6) 9334 NM_001318199 29887 Hs.741316 NM_013322 ENSG00000086300 SNX10 OPTB8 sorting nexin 10 protein-coding chr15-2259 chr15 42045010 42045220 + 7.89 0.000 intron (NM_001206670, intron 1 of 19) intron (NM_001206670, intron 1 of 19) 5588 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chr7-8400 chr7 45515356 45515566 + 7.89 0.000 Intergenic Intergenic -58679 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chrX-2271 chrX 49034671 49034881 + 7.89 0.000 intron (NM_001282142, intron 5 of 9) intron (NM_001282142, intron 5 of 9) 8581 NM_001282142 7030 Hs.730740 NM_006521 ENSG00000068323 TFE3 RCCP2|RCCX1|TFEA|bHLHe33 transcription factor binding to IGHM enhancer 3 protein-coding chr7-7925 chr7 8237655 8237865 + 7.89 0.000 intron (NM_001350826, intron 1 of 14) L1MB1|LINE|L1 24292 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr3-9244 chr3 38718784 38718994 + 7.89 0.000 intron (NM_006514, intron 19 of 26) intron (NM_006514, intron 19 of 26) -69202 NM_001354701 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr2-4721 chr2 237132038 237132248 + 7.89 0.000 Intergenic Intergenic 46254 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr12-5117 chr12 96930664 96930874 + 7.89 0.000 intron (NM_001135177, intron 4 of 13) MER68|LTR|ERVL 23303 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr10-3300 chr10 777283 777493 + 7.89 0.000 Intergenic Intergenic -87720 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr15-3626 chr15 77648552 77648762 + 7.89 0.000 non-coding (NR_045123, exon 3 of 3) non-coding (NR_045123, exon 3 of 3) 6893 NR_045123 253044 Hs.667685 NM_001242772 ENSG00000259666 LINGO1-AS1 - LINGO1 antisense RNA 1 ncRNA chr19-4901 chr19 41763248 41763458 + 7.89 0.000 intron (NM_002483, intron 4 of 5) intron (NM_002483, intron 4 of 5) 7823 NM_002483 4680 Hs.466814 NM_002483 ENSG00000086548 CEACAM6 CD66c|CEAL|NCA carcinoembryonic antigen related cell adhesion molecule 6 protein-coding chr4-4155 chr4 8117371 8117581 + 7.89 0.000 intron (NM_001130084, intron 1 of 19) intron (NM_001130084, intron 1 of 19) 41337 NM_001130085 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr22-2043 chr22 42743513 42743723 + 7.89 0.000 Intergenic Intergenic -22317 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr13-3743 chr13 41917685 41917895 + 7.89 0.000 intron (NM_001009814, intron 2 of 25) intron (NM_001009814, intron 2 of 25) 43295 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr4-8052 chr4 121015616 121015826 + 7.89 0.000 Intergenic Intergenic 56814 NM_024574 79625 Hs.709520 NM_024574 ENSG00000173376 NDNF C4orf31|NORD neuron derived neurotrophic factor protein-coding chr20-1130 chr20 35017998 35018208 + 7.89 0.000 intron (NM_199368, intron 9 of 18) MIR3|SINE|MIR -27631 NR_039912 100616134 NR_039912 ENSG00000283441 MIR499B MIR499A|hsa-mir-499b microRNA 499b ncRNA chr12-4034 chr12 47591142 47591352 + 7.89 0.000 Intergenic Intergenic 114783 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr17-8494 chr17 78725666 78725876 + 7.89 0.000 intron (NM_004762, intron 1 of 12) intron (NM_004762, intron 1 of 12) -2021 NM_001292018 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr9-4630 chr9 111520881 111521091 + 7.89 0.000 Intergenic L2|LINE|L2 -4193 NM_001007169 158399 Hs.584864 NM_133464 ENSG00000173258 ZNF483 ZKSCAN16|ZSCAN48 zinc finger protein 483 protein-coding chr20-3822 chr20 23964015 23964225 + 7.89 0.000 Intergenic LOR1-int|LTR|ERV1 22755 NM_178312 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr2-10387 chr2 177222662 177222872 + 7.89 0.000 non-coding (NR_138470, exon 12 of 12) non-coding (NR_138470, exon 12 of 12) 9973 NR_138470 220988 Hs.516539 NM_194247 ENSG00000170144 HNRNPA3 2610510D13Rik|D10S102|FBRNP|HNRPA3 heterogeneous nuclear ribonucleoprotein A3 protein-coding chr12-4173 chr12 90361213 90361423 + 7.89 0.000 Intergenic Intergenic 68000 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr7-8494 chr7 51320592 51320802 + 7.89 0.000 Intergenic Intergenic -3836 NM_001287436 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr5-6398 chr5 145362910 145363120 + 7.89 0.000 Intergenic Intergenic 472327 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr17-7565 chr17 19741518 19741728 + 7.89 0.000 intron (NM_000691, intron 5 of 10) intron (NM_000691, intron 5 of 10) 3836 NM_001135168 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr4-2743 chr4 7784506 7784716 + 7.89 0.000 intron (NM_001134647, intron 12 of 17) intron (NM_001134647, intron 12 of 17) 30521 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr11-9384 chr11 55401021 55401231 + 7.89 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 33242 NM_001005275 81328 Hs.554529 NM_001005275 ENSG00000181958 OR4A15 OR11-118 olfactory receptor family 4 subfamily A member 15 protein-coding chr13-2086 chr13 73048203 73048413 + 7.89 0.000 Intergenic AluSx1|SINE|Alu -6668 NM_001286818 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr1-10494 chr1 164926402 164926612 + 7.89 0.000 Intergenic Intergenic -151866 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr5-6188 chr5 60747021 60747231 + 7.89 0.000 Intergenic L2a|LINE|L2 -46960 NM_001145208 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr12-4106 chr12 58443511 58443721 + 7.89 0.000 Intergenic MER58A|DNA|hAT-Charlie -148086 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr18-1441 chr18 27366474 27366684 + 7.89 0.000 Intergenic Intergenic -23923 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr15-5185 chr15 93241068 93241278 + 7.89 0.000 Intergenic Intergenic 35107 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr11-9826 chr11 71946260 71946470 + 7.89 0.000 intron (NM_001300926, intron 1 of 6) L1MB8|LINE|L1 17319 NM_018320 55298 Hs.368554 NM_018320 ENSG00000137522 RNF121 - ring finger protein 121 protein-coding chr5-8984 chr5 163312763 163312973 + 7.89 0.000 Intergenic Intergenic -124703 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr8-2295 chr8 124809754 124809964 + 7.89 0.000 Intergenic Intergenic -12126 NR_039806 100616221 NR_039806 ENSG00000283609 MIR4662A - microRNA 4662a ncRNA chr12-5964 chr12 86590799 86591009 + 7.89 0.000 intron (NM_001351285, intron 2 of 8) intron (NM_001351285, intron 2 of 8) 154245 NR_162123 113839519 NR_162123 MIR3059 - microRNA 3059 ncRNA chr15-3445 chr15 91407296 91407506 + 7.89 0.000 Intergenic LTR16A1|LTR|ERVL -55938 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr6-6426 chr6 94302368 94302578 + 7.89 0.000 Intergenic L1PA16|LINE|L1 584170 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr17-5048 chr17 2462954 2463164 + 7.89 0.000 intron (NM_024086, intron 6 of 9) intron (NM_024086, intron 6 of 9) -47623 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr5-5094 chr5 98341109 98341319 + 7.89 0.000 Intergenic Intergenic -179975 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr13-3557 chr13 24752103 24752313 + 7.89 0.000 Intergenic Intergenic -11961 NM_031277 56163 Hs.97464 NM_031277 ENSG00000132972 RNF17 Mmip-2|SPATA23|TDRD4 ring finger protein 17 protein-coding chr5-2655 chr5 10611430 10611640 + 7.89 0.000 intron (NM_001164440, intron 1 of 3) intron (NM_001164440, intron 1 of 3) 47465 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr2-12118 chr2 35596285 35596495 + 7.89 0.000 Intergenic Intergenic 124985 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr2-5954 chr2 38338043 38338253 + 7.89 0.000 intron (NM_001330461, intron 1 of 12) L1PA16|LINE|L1 38382 NM_001330459 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr8-2688 chr8 92587493 92587703 + 7.89 0.000 intron (NR_125827, intron 3 of 4) intron (NR_125827, intron 3 of 4) 67896 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr15-4884 chr15 76105684 76105894 + 7.89 0.000 intron (NM_152335, intron 1 of 10) L2b|LINE|L2 45804 NM_152335 123591 Hs.661411 NM_152335 ENSG00000169758 TMEM266 C15orf27|HVRP1|HsHVRP1|hTMEM266 transmembrane protein 266 protein-coding chr2-10356 chr2 166465617 166465827 + 7.89 0.000 intron (NR_045628, intron 7 of 25) intron (NR_045628, intron 7 of 25) 21249 NM_002976 6332 Hs.596087 NM_002976 ENSG00000136546 SCN7A NaG|Nav2.1|Nav2.2|SCN6A sodium voltage-gated channel alpha subunit 7 protein-coding chr22-1207 chr22 27475656 27475866 + 7.89 0.000 Intergenic Intergenic 165110 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr2-13351 chr2 135195367 135195577 + 7.89 0.000 Intergenic Intergenic 58844 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr5-3596 chr5 97090979 97091189 + 7.89 0.000 TTS (NM_153234) TTS (NM_153234) 51527 NM_153234 167410 Hs.656702 NM_153234 ENSG00000145721 LIX1 C5orf11|Lft limb and CNS expressed 1 protein-coding chr12-6932 chr12 25570023 25570233 + 7.89 0.000 intron (NM_001352234, intron 1 of 8) intron (NM_001352234, intron 1 of 8) -16845 NM_152590 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr17-1163 chr17 28224332 28224542 + 7.89 0.000 Intergenic SVA_F|Retroposon|SVA -2126 NR_003064 23615 Hs.157195 NM_021093 ENSG00000237575 PYY2 - peptide YY 2 (pseudogene) pseudo chr4-2458 chr4 184433323 184433533 + 7.89 0.000 intron (NM_002199, intron 1 of 8) intron (NM_002199, intron 1 of 8) 41122 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr9-4706 chr9 126586754 126586964 + 7.89 0.000 Intergenic Intergenic -27584 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr15-5242 chr15 97885643 97885853 + 7.89 0.000 Intergenic Intergenic -11319 NR_024172 91948 Hs.130423 NR_024172 ENSG00000251209 LINC00923 - long intergenic non-protein coding RNA 923 ncRNA chr12-3121 chr12 31002650 31002860 + 7.89 0.000 Intergenic Intergenic 71092 NR_038927 100506660 Hs.586774 NR_038927 ENSG00000245614 DDX11-AS1 CONCR|SCAT4 DDX11 antisense RNA 1 ncRNA chr11-7495 chr11 2538182 2538392 + 7.89 0.000 intron (NM_181798, intron 2 of 15) intron (NM_181798, intron 2 of 15) 76833 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr13-2057 chr13 51781390 51781600 + 7.89 0.000 intron (NM_001031719, intron 4 of 7) L2a|LINE|L2 22667 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr4-7830 chr4 101074289 101074499 + 7.89 0.000 intron (NM_001130691, intron 8 of 12) LTR86A1|LTR|ERVL 166478 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr17-5182 chr17 12389496 12389706 + 7.89 0.000 Intergenic LTR16|LTR|ERVL -160367 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chr6-3429 chr6 121520672 121520882 + 7.89 0.000 Intergenic Intergenic 85131 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding ML143364.1-2 ML143364.1 96171 96381 + 7.89 0.000 NA NA NA NA chr6-3566 chr6 56842777 56842987 + 7.89 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 783 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr13-1948 chr13 98399750 98399960 + 7.89 0.000 intron (NM_005766, intron 13 of 26) intron (NM_005766, intron 13 of 26) 122270 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chrX-2233 chrX 45348177 45348387 + 7.89 0.000 Intergenic L2b|LINE|L2 -147406 NM_024689 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr2-3368 chr2 2865030 2865240 + 7.89 0.000 Intergenic Intergenic 260891 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr17-6874 chr17 29089651 29089861 + 7.89 0.000 intron (NM_001346767, intron 36 of 39) intron (NM_001346767, intron 36 of 39) -14147 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr3-9856 chr3 79800473 79800683 + 7.89 0.000 Intergenic L1MC4|LINE|L1 -32580 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr10-7686 chr10 29142011 29142221 + 7.89 0.000 Intergenic Intergenic -146954 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr1-8488 chr1 147722949 147723159 + 7.89 0.000 Intergenic MIR|SINE|MIR 37548 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chrX-2175 chrX 38837965 38838175 + 7.89 0.000 Intergenic Intergenic -34187 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr4-8007 chr4 116520594 116520804 + 7.89 0.000 Intergenic MER50|LTR|ERV1 220974 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr6-8207 chr6 135048365 135048575 + 7.89 0.000 intron (NM_006620, intron 2 of 17) LTR50|LTR|ERVL 6352 NM_006620 10767 Hs.378532 NM_006620 ENSG00000112339 HBS1L EF-1a|ERFS|HBS1|HSPC276|eRF3c HBS1 like translational GTPase protein-coding chrX-5042 chrX 122703740 122703950 + 7.89 0.000 Intergenic L1MA5A|LINE|L1 -480398 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr7-5375 chr7 31644878 31645088 + 7.89 0.000 intron (NM_194300, intron 10 of 12) intron (NM_194300, intron 10 of 12) -42034 NM_001145123 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr18-2575 chr18 9927421 9927631 + 7.89 0.000 intron (NM_194434, intron 1 of 5) intron (NM_194434, intron 1 of 5) 13510 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr21-516 chr21 35256571 35256781 + 7.89 0.000 Intergenic Intergenic -207378 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr5-6913 chr5 133897678 133897888 + 7.89 0.000 Intergenic Intergenic -15894 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr4-3974 chr4 526243 526453 + 7.89 0.000 intron (NM_001345994, intron 10 of 13) intron (NM_001345994, intron 10 of 13) 27138 NM_001345989 54872 Hs.7099 NM_017733 ENSG00000174227 PIGG GPI7|LAS21|MRT53|PRO4405|RLGS1930 phosphatidylinositol glycan anchor biosynthesis class G protein-coding chr8-3437 chr8 81783844 81784054 + 7.89 0.000 Intergenic Intergenic 51501 NM_152284 92421 Hs.183861 NM_152284 ENSG00000164695 CHMP4C SNF7-3|Shax3|VPS32C charged multivesicular body protein 4C protein-coding chr3-7935 chr3 152814414 152814624 + 7.89 0.000 Intergenic Intergenic -20612 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr10-5237 chr10 64650434 64650644 + 7.89 0.000 Intergenic Intergenic -174989 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr12-6245 chr12 40827003 40827213 + 7.89 0.000 promoter-TSS (NM_001256064) promoter-TSS (NM_001256064) -830 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr4-6123 chr4 21451164 21451374 + 7.89 0.000 intron (NM_147182, intron 2 of 8) MamGypsy2-I|LTR|Gypsy 13489 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr11-10404 chr11 114224598 114224808 + 7.89 0.000 intron (NM_006006, intron 4 of 6) L2c|LINE|L2 -71110 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr1-10516 chr1 167662929 167663139 + 7.89 0.000 intron (NM_001322923, intron 1 of 5) intron (NM_001322923, intron 1 of 5) 32802 NM_001322924 92241 Hs.493867 NM_052862 ENSG00000198771 RCSD1 CAPZIP|MK2S4 RCSD domain containing 1 protein-coding chr11-5938 chr11 16198997 16199207 + 7.89 0.000 intron (NM_033326, intron 4 of 15) intron (NM_033326, intron 4 of 15) 157444 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr17-5151 chr17 8441278 8441488 + 7.89 0.000 intron (NM_030808, intron 1 of 8) CR1_Mam|LINE|CR1 5499 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr11-7764 chr11 82433007 82433217 + 7.89 0.000 Intergenic L2c|LINE|L2 -29199 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr15-3120 chr15 65293475 65293685 + 7.89 0.000 Intergenic AluSz|SINE|Alu -2471 NR_002756 26831 NR_002756 ENSG00000199568 RNU5A-1 RNU5|RNU5A|RNU5C|U5A|U5B1 RNA, U5A small nuclear 1 snRNA chr4-5303 chr4 178415902 178416112 + 7.89 0.000 Intergenic MER52A|LTR|ERV1 -508071 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr8-3129 chr8 63186977 63187187 + 7.89 0.000 exon (NM_001277815, exon 5 of 6) exon (NM_001277815, exon 5 of 6) 18079 NM_001277818 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 - YTH N6-methyladenosine RNA binding protein 3 protein-coding chr8-5435 chr8 36064629 36064839 + 7.89 0.000 Intergenic L2a|LINE|L2 -354414 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr6-8526 chr6 159985262 159985472 + 7.89 0.000 intron (NM_000876, intron 1 of 47) intron (NM_000876, intron 1 of 47) 16268 NM_000876 3482 Hs.487062 NM_000876 ENSG00000197081 IGF2R CD222|CI-M6PR|CIMPR|M6P-R|M6P/IGF2R|MPR 300|MPR1|MPR300|MPRI insulin like growth factor 2 receptor protein-coding chr15-3218 chr15 73326888 73327098 + 7.89 0.000 intron (NM_005477, intron 4 of 7) AluJb|SINE|Alu 27083 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr10-8633 chr10 98283902 98284112 + 7.89 0.000 Intergenic HERV16-int|LTR|ERVL -15813 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr10-4384 chr10 45095944 45096154 + 7.89 0.000 Intergenic Intergenic 58547 NR_024472 100133308 Hs.434365 NR_024472 RSU1P2 - Ras suppressor protein 1 pseudogene 2 pseudo chr18-2898 chr18 11561257 11561467 + 7.89 0.000 Intergenic MIR3|SINE|MIR -48196 NM_001282300 646000 NM_001282300 ENSG00000236396 SLC35G4 AMAC1L1|SLC35G4P solute carrier family 35 member G4 protein-coding chr20-3474 chr20 57272390 57272600 + 7.89 0.000 Intergenic Charlie8|DNA|hAT-Charlie -5854 NM_001719 655 Hs.473163 NM_001719 ENSG00000101144 BMP7 OP-1 bone morphogenetic protein 7 protein-coding chr1-13623 chr1 9807068 9807278 + 7.89 0.000 intron (NM_001009566, intron 1 of 18) MER103C|DNA|hAT-Charlie 17353 NM_014944 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr10-1206 chr10 744028 744238 + 7.89 0.000 Intergenic Intergenic -54465 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr18-3406 chr18 62399947 62400157 + 7.89 0.000 Intergenic Intergenic 74742 NM_003839 8792 Hs.204044 NM_003839 ENSG00000141655 TNFRSF11A CD265|FEO|LOH18CR1|ODFR|OFE|OPTB7|OSTS|PDB2|RANK|TRANCER TNF receptor superfamily member 11a protein-coding chr13-1815 chr13 51956225 51956435 + 7.89 0.000 intron (NM_001005918, intron 6 of 16) intron (NM_001005918, intron 6 of 16) 55120 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chr7-5111 chr7 4022120 4022330 + 7.89 0.000 intron (NM_152744, intron 17 of 44) intron (NM_152744, intron 17 of 44) -107460 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr16-4349 chr16 31464816 31465026 + 7.89 0.000 exon (NM_024742, exon 4 of 4) exon (NM_024742, exon 4 of 4) 5925 NM_024742 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding chr13-2425 chr13 45773453 45773663 + 7.89 0.000 Intergenic LTR75B|LTR|ERVL 71089 NM_001286342 220082 Hs.186363 NM_152719 ENSG00000174015 SPERT CBY2|NURIT spermatid associated protein-coding chr2-14683 chr2 237397987 237398197 + 7.89 0.000 intron (NM_057165, intron 1 of 7) intron (NM_057165, intron 1 of 7) 16072 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr3-6475 chr3 109569406 109569616 + 7.89 0.000 Intergenic HAL1|LINE|L1 -33317 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr9-5633 chr9 120255683 120255893 + 7.89 0.000 Intergenic LTR16|LTR|ERVL -10738 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr2-5963 chr2 45812173 45812383 + 7.89 0.000 intron (NM_005400, intron 1 of 14) MIRc|SINE|MIR 160603 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr21-846 chr21 25313860 25314070 + 7.89 0.000 Intergenic Intergenic 117736 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA chr2-2922 chr2 240507325 240507535 + 7.89 0.000 intron (NM_001282780, intron 9 of 13) intron (NM_001282780, intron 9 of 13) 50558 NM_016552 51281 Hs.656615 NM_016552 ENSG00000144504 ANKMY1 ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding chr7-8366 chr7 44252232 44252442 + 7.89 0.000 intron (NM_172081, intron 5 of 18) intron (NM_172081, intron 5 of 18) 51359 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr8-3237 chr8 140669717 140669927 + 7.89 0.000 intron (NR_148037, intron 31 of 34) intron (NR_148037, intron 31 of 34) -34189 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr5-4545 chr5 18054732 18054942 + 7.89 0.000 Intergenic Intergenic 247563 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr3-4429 chr3 14138595 14138805 + 7.89 0.000 intron (NM_024334, intron 10 of 11) intron (NM_024334, intron 10 of 11) 13760 NM_024334 79188 Hs.517817 NM_024334 ENSG00000170876 TMEM43 ARVC5|ARVD5|EDMD7|LUMA transmembrane protein 43 protein-coding chr9-4044 chr9 94921054 94921264 + 7.89 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 24395 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr2-5768 chr2 222294417 222294627 + 7.89 0.000 intron (NM_181457, intron 3 of 7) intron (NM_181457, intron 3 of 7) -3625 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr11-2990 chr11 111298410 111298620 + 7.89 0.000 promoter-TSS (NM_001271457) promoter-TSS (NM_001271457) -31 NM_001271458 120376 Hs.31409 NM_001136105 ENSG00000214290 COLCA2 C11orf93|CASC13|LOH11CR1G colorectal cancer associated 2 protein-coding chr5-7223 chr5 9069804 9070014 + 7.89 0.000 intron (NM_003966, intron 16 of 22) intron (NM_003966, intron 16 of 22) -16014 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr20-3053 chr20 3117037 3117247 + 7.89 0.000 intron (NM_001267584, intron 3 of 4) intron (NM_001267584, intron 3 of 4) 10231 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chr8-4388 chr8 103101902 103102112 + 7.89 0.000 Intergenic Intergenic -19025 NR_145429 379034 Hs.591862 NR_145429 LINC01181 - long intergenic non-protein coding RNA 1181 ncRNA chr8-6530 chr8 67534120 67534330 + 7.89 0.000 intron (NM_020361, intron 2 of 10) intron (NM_020361, intron 2 of 10) 190391 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr12-6041 chr12 111256777 111256987 + 7.89 0.000 intron (NM_015267, intron 3 of 21) intron (NM_015267, intron 3 of 21) -47260 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr2-10944 chr2 81026289 81026499 + 7.89 0.000 Intergenic L1PB2|LINE|L1 440552 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr2-10772 chr2 42102863 42103073 + 7.89 0.000 Intergenic Intergenic 54947 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr18-1807 chr18 13257729 13257939 + 7.89 0.000 intron (NM_181482, intron 1 of 5) MER20|DNA|hAT-Charlie 18291 NR_146617 147276 Hs.675872 NR_146617 ENSG00000279020 C18orf15 HsT3231 chromosome 18 open reading frame 15 (putative) ncRNA chr22-3259 chr22 45470501 45470711 + 7.89 0.000 Intergenic Intergenic -32277 NM_006486 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr12-7037 chr12 39106103 39106313 + 7.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR -200617 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr2-10363 chr2 169664824 169665034 + 7.89 0.000 intron (NM_001085447, intron 4 of 8) LTR52|LTR|ERVL 29476 NM_001085447 129881 Hs.370111 NM_001085447 ENSG00000154479 CCDC173 C2orf77 coiled-coil domain containing 173 protein-coding chr16-2761 chr16 3754283 3754493 + 7.89 0.000 intron (NM_004380, intron 19 of 30) intron (NM_004380, intron 19 of 30) -36864 NM_001272049 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr7-7584 chr7 125230414 125230624 + 7.89 0.000 non-coding (NR_110182, exon 5 of 5) non-coding (NR_110182, exon 5 of 5) 33772 NR_110183 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr17-5715 chr17 57040774 57040984 + 7.89 0.000 Intergenic Intergenic -4599 NR_002818 376412 Hs.132299 NR_002818 ENSG00000261192 RNF126P1 - ring finger protein 126 pseudogene 1 pseudo chr14-4620 chr14 53064792 53065002 + 7.89 0.000 intron (NM_030637, intron 6 of 11) intron (NM_030637, intron 6 of 11) 88426 NM_001160147 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding chr1-16546 chr1 233470207 233470417 + 7.89 0.000 Intergenic L1PB4|LINE|L1 142588 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr19-3456 chr19 31105960 31106170 + 7.89 0.000 Intergenic Intergenic -61445 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr17-6531 chr17 35026490 35026700 + 7.89 0.000 intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) 37112 NM_001017368 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr12-6831 chr12 13558828 13559038 + 7.89 0.000 3' UTR (NM_000834, exon 13 of 13) 3' UTR (NM_000834, exon 13 of 13) -182188 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr4-8463 chr4 156517029 156517239 + 7.89 0.000 Intergenic Intergenic 454665 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr11-8679 chr11 4385381 4385591 + 7.89 0.000 exon (NM_003141, exon 7 of 7) exon (NM_003141, exon 7 of 7) 8216 NM_003141 6737 Hs.532357 NM_003141 ENSG00000132109 TRIM21 RNF81|RO52|Ro/SSA|SSA|SSA1 tripartite motif containing 21 protein-coding chr16-2019 chr16 4585490 4585700 + 7.89 0.000 intron (NM_001145011, intron 7 of 15) MIR|SINE|MIR 29105 NM_001145011 342346 Hs.684212 NM_001145011 ENSG00000205832 C16orf96 - chromosome 16 open reading frame 96 protein-coding chr18-2110 chr18 51379429 51379639 + 7.89 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -12508 NR_040075 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr9-5267 chr9 80315815 80316025 + 7.89 0.000 Intergenic Intergenic 340897 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr20-2891 chr20 63151711 63151921 + 7.89 0.000 Intergenic Intergenic -26684 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA chrX-2905 chrX 150509117 150509327 + 7.89 0.000 intron (NM_005491, intron 5 of 6) intron (NM_005491, intron 5 of 6) -59375 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr4-7471 chr4 71081324 71081534 + 7.89 0.000 Intergenic Intergenic 87780 NM_000788 1633 Hs.709 NM_000788 ENSG00000156136 DCK - deoxycytidine kinase protein-coding chr15-3745 chr15 59873374 59873584 + 7.89 0.000 Intergenic Intergenic -130832 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr12-4278 chr12 121764997 121765207 + 7.89 0.000 intron (NM_001080825, intron 6 of 11) intron (NM_001080825, intron 6 of 11) 28586 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr19-6287 chr19 8079736 8079946 + 7.89 0.000 intron (NM_032447, intron 59 of 63) AluSz6|SINE|Alu 27079 NM_005624 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr4-8642 chr4 175346548 175346758 + 7.89 0.000 Intergenic Intergenic 428295 NM_001130704 11086 Hs.126838 NM_014269 ENSG00000168594 ADAM29 CT73|svph1 ADAM metallopeptidase domain 29 protein-coding chr7-8007 chr7 17062456 17062666 + 7.89 0.000 Intergenic Intergenic -180578 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr8-3536 chr8 120569860 120570070 + 7.89 0.000 intron (NM_021021, intron 4 of 6) LTR16A2|LTR|ERVL 124546 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr10-4607 chr10 114825927 114826137 + 7.89 0.000 intron (NM_001135051, intron 1 of 16) intron (NM_001135051, intron 1 of 16) 4252 NM_020940 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding chr6-2937 chr6 27592486 27592696 + 7.89 0.000 Intergenic Intergenic -101444 NR_038293 100507173 Hs.635987 NR_038292 ENSG00000281706 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA chr6-4873 chr6 89494509 89494719 + 7.89 0.000 intron (NM_001242809, intron 1 of 15) intron (NM_001242809, intron 1 of 15) 61436 NM_014942 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr8-2555 chr8 32554648 32554858 + 7.89 0.000 intron (NM_013960, intron 1 of 12) intron (NM_013960, intron 1 of 12) 6442 NM_004495 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr6-5729 chr6 148497315 148497525 + 7.89 0.000 intron (NM_001346506, intron 9 of 20) intron (NM_001346506, intron 9 of 20) -11079 NM_001346507 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr11-5952 chr11 17036724 17036934 + 7.89 0.000 Intergenic L1M1|LINE|L1 -15057 NR_045002 10819 Hs.523504 NR_045002 ENSG00000184669 OR7E14P OR11-5|OR7E151P olfactory receptor family 7 subfamily E member 14 pseudogene pseudo chr3-10729 chr3 155165677 155165887 + 7.89 0.000 intron (NM_000902, intron 17 of 22) L2|LINE|L2 -75163 NR_125399 101928190 Hs.121410 NR_125399 ENSG00000241336 LINC01487 - long intergenic non-protein coding RNA 1487 ncRNA chr2-12667 chr2 74568699 74568909 + 7.89 0.000 intron (NM_001321739, intron 7 of 10) L1MEg1|LINE|L1 14644 NM_001381 1796 Hs.103854 NM_001381 ENSG00000115325 DOK1 P62DOK|pp62 docking protein 1 protein-coding chr10-6517 chr10 64384763 64384973 + 7.89 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -440660 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr13-2169 chr13 113102124 113102334 + 7.89 0.000 Intergenic Intergenic -3559 NM_000131 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr2-6721 chr2 28489246 28489456 + 7.89 0.000 Intergenic MIRc|SINE|MIR -6709 NM_153021 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2-4581 chr2 86622536 86622746 + 7.89 0.000 intron (NM_001198954, intron 2 of 7) intron (NM_001198954, intron 2 of 7) 1224 NM_005667 7844 Hs.469199 NM_005667 ENSG00000239305 RNF103 HKF-1|KF-1|KF1|ZFP-103|ZFP103 ring finger protein 103 protein-coding chr17-7691 chr17 31481059 31481269 + 7.89 0.000 intron (NM_032932, intron 3 of 14) intron (NM_032932, intron 3 of 14) -6944 NM_001346748 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr7-6559 chr7 56026441 56026651 + 7.89 0.000 intron (NM_001370522, intron 4 of 8) AluSz|SINE|Alu 24898 NM_001370511 5723 Hs.512656 NM_004577 ENSG00000146733 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding chr12-7005 chr12 31506797 31507007 + 7.89 0.000 intron (NM_001308339, intron 1 of 22) MER21C|LTR|ERVL -83021 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr12-7458 chr12 63585267 63585477 + 7.89 0.000 intron (NM_173812, intron 16 of 21) intron (NM_173812, intron 16 of 21) 83121 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding chr1-2683 chr1 202625551 202625761 + 7.89 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) 17797 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr16-5341 chr16 82656761 82656971 + 7.89 0.000 intron (NM_001220488, intron 2 of 14) L1MC1|LINE|L1 29897 NM_001220490 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr4-4708 chr4 88143488 88143698 + 7.89 0.000 intron (NM_001257386, intron 1 of 15) intron (NM_001257386, intron 1 of 15) 15046 NM_004827 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr7-7190 chr7 10490690 10490900 + 7.89 0.000 intron (NR_147499, intron 2 of 2) intron (NR_147499, intron 2 of 2) -211881 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr9-8021 chr9 94935694 94935904 + 7.89 0.000 intron (NR_147613, intron 1 of 2) L2c|LINE|L2 9755 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr16-6496 chr16 59016511 59016721 + 7.89 0.000 Intergenic L1MEc|LINE|L1 -282300 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr1-14971 chr1 89271578 89271788 + 7.89 0.000 intron (NM_052942, intron 1 of 11) intron (NM_052942, intron 1 of 11) 1177 NM_001134486 115362 Hs.513726 NM_052942 ENSG00000154451 GBP5 GBP-5 guanylate binding protein 5 protein-coding chr2-8231 chr2 96843579 96843789 + 7.89 0.000 intron (NM_144994, intron 1 of 8) intron (NM_144994, intron 1 of 8) 337 NM_144994 200539 Hs.643430 NM_144994 ENSG00000163126 ANKRD23 DARP|MARP3 ankyrin repeat domain 23 protein-coding chr5-8340 chr5 119149797 119150007 + 7.89 0.000 exon (NM_001290322, exon 18 of 43) exon (NM_001290322, exon 18 of 43) -4735 NR_049892 100847085 NR_049892 ENSG00000264536 MIR5706 - microRNA 5706 ncRNA chr2-7977 chr2 64898169 64898379 + 7.89 0.000 Intergenic HERVE-int|LTR|ERV1 34173 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr4-5091 chr4 147513401 147513611 + 7.89 0.000 intron (NM_001166055, intron 2 of 5) intron (NM_001166055, intron 2 of 5) 32409 NR_148963 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr12-7840 chr12 101994215 101994425 + 7.89 0.000 Intergenic L1MA3|LINE|L1 67671 NM_016053 51019 Hs.405692 NM_016053 ENSG00000120860 WASHC3 CCDC53|CGI-116 WASH complex subunit 3 protein-coding chr6-6497 chr6 117728820 117729030 + 7.89 0.000 Intergenic Intergenic 53456 NM_138459 116150 Hs.289008 NM_138459 ENSG00000153989 NUS1 C6orf68|CDG1AA|MGC:7199|MRD55|NgBR|TANGO14 NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding chr3-11185 chr3 193067373 193067583 + 7.89 0.000 Intergenic Intergenic -149622 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr20-4063 chr20 38204102 38204312 + 7.89 0.000 Intergenic LTR16A2|LTR|ERVL -37699 NM_001323316 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr7-9376 chr7 130717656 130717866 + 7.89 0.000 Intergenic Intergenic 16272 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr7-4650 chr7 31431304 31431514 + 7.89 0.000 Intergenic Intergenic -82662 NM_001257967 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr7-8279 chr7 38714871 38715081 + 7.89 0.000 Intergenic Intergenic -27887 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chr13-1142 chr13 30395353 30395563 + 7.89 0.000 Intergenic Intergenic -21544 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr1-9706 chr1 52018992 52019202 + 7.89 0.000 Intergenic MIR|SINE|MIR 14713 NM_138417 112970 Hs.476033 NM_138417 ENSG00000198841 KTI12 SBBI81|TOT4 KTI12 chromatin associated homolog protein-coding chr13-1568 chr13 33917828 33918038 + 7.89 0.000 intron (NM_181558, intron 8 of 8) intron (NM_181558, intron 8 of 8) 99784 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr17-7584 chr17 20987313 20987523 + 7.89 0.000 Intergenic Intergenic 48852 NR_160718 339260 Hs.661076 NR_123730 ENSG00000233098 LOC339260 - uncharacterized LOC339260 ncRNA chr15-3590 chr15 54300570 54300780 + 7.89 0.000 intron (NM_001329919, intron 12 of 31) MER5A|DNA|hAT-Charlie 288027 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr6-7354 chr6 47414492 47414702 + 7.89 0.000 Intergenic Intergenic -63192 NM_012120 23607 Hs.485518 NM_012120 ENSG00000198087 CD2AP CMS CD2 associated protein protein-coding chr14-5055 chr14 82253855 82254065 + 7.89 0.000 Intergenic AluSx1|SINE|Alu -388672 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr14-1818 chr14 47538749 47538959 + 7.89 0.000 intron (NM_001113498, intron 1 of 16) intron (NM_001113498, intron 1 of 16) 136100 NM_001113498 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr4-3311 chr4 168003253 168003463 + 7.89 0.000 Intergenic AluJb|SINE|Alu -89179 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr8-5611 chr8 96354063 96354273 + 7.89 0.000 Intergenic MER121|DNA|hAT? 32480 NR_125829 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr3-6662 chr3 129265618 129265828 + 7.89 0.000 exon (NM_016128, exon 14 of 24) exon (NM_016128, exon 14 of 24) -6423 NR_106884 102465496 NR_106884 ENSG00000278658 MIR6826 hsa-mir-6826 microRNA 6826 ncRNA chr4-8431 chr4 153710934 153711144 + 7.89 0.000 intron (NM_173662, intron 8 of 8) L4_C_Mam|LINE|RTE-X 26759 NM_001318791 7097 Hs.519033 NM_003264 ENSG00000137462 TLR2 CD282|TIL4 toll like receptor 2 protein-coding chr11-6939 chr11 111203580 111203790 + 7.89 0.000 Intergenic L1MEd|LINE|L1 -42040 NM_198498 341032 Hs.298685 NM_198498 ENSG00000150750 C11orf53 - chromosome 11 open reading frame 53 protein-coding chr3-8700 chr3 186540813 186541023 + 7.89 0.000 intron (NM_017541, intron 1 of 2) L2b|LINE|L2 3462 NM_017541 1427 Hs.376209 NM_017541 ENSG00000213139 CRYGS CRYG8|CTRCT20 crystallin gamma S protein-coding chr7-8200 chr7 31693350 31693560 + 7.89 0.000 intron (NM_001145123, intron 2 of 3) intron (NM_001145123, intron 2 of 3) 6240 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr14-4834 chr14 69257091 69257301 + 7.89 0.000 Intergenic MIRb|SINE|MIR -2962 NM_001168368 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr4-2463 chr4 822020 822230 + 7.89 0.000 intron (NM_006651, intron 2 of 3) (TCTCTC)n|Simple_repeat|Simple_repeat 4004 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr3-8749 chr3 1457006 1457216 + 7.89 0.000 Intergenic LFSINE_Vert|SINE|tRNA 364087 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr10-3365 chr10 17290303 17290513 + 7.89 0.000 Intergenic LFSINE_Vert|SINE|tRNA -60423 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr3-9652 chr3 60742489 60742699 + 7.89 0.000 intron (NR_148921, intron 4 of 4) intron (NR_148921, intron 4 of 4) -124724 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr3-2516 chr3 10469536 10469746 + 7.89 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) 35943 NM_001363862 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr9-3933 chr9 135734040 135734250 + 7.89 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 31960 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr1-15453 chr1 154321422 154321632 + 7.89 0.000 intron (NM_080429, intron 1 of 5) MER41-int|LTR|ERV1 434 NM_080429 89872 Hs.259048 NM_080429 ENSG00000143595 AQP10 AQPA_HUMAN aquaporin 10 protein-coding chr13-2146 chr13 106182716 106182926 + 7.89 0.000 Intergenic Intergenic -193743 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr16-1940 chr16 3058372 3058582 + 7.89 0.000 exon (NM_022468, exon 9 of 10) exon (NM_022468, exon 9 of 10) 893 NR_123723 100507419 Hs.312579 NR_123723 MMP25-AS1 - MMP25 antisense RNA 1 ncRNA chr7-7271 chr7 32227105 32227315 + 7.89 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 72118 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chrX-4710 chrX 87616652 87616862 + 7.89 0.000 intron (NM_057162, intron 3 of 10) intron (NM_057162, intron 3 of 10) 98955 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr5-4499 chr5 10918228 10918438 + 7.89 0.000 Intergenic Intergenic -157099 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr10-4040 chr10 21944772 21944982 + 7.89 0.000 intron (NM_022365, intron 1 of 11) L2|LINE|L2 58853 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr20-719 chr20 62581389 62581599 + 7.89 0.000 Intergenic (CCCCA)n|Simple_repeat|Simple_repeat 16582 NR_029676 406923 NR_029676 ENSG00000284508 MIR133A2 MIRN133A2|mir-133a-2 microRNA 133a-2 ncRNA chr13-2749 chr13 97982039 97982249 + 7.89 0.000 intron (NM_002271, intron 4 of 28) intron (NM_002271, intron 4 of 28) 28469 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr20-3972 chr20 35120367 35120577 + 7.89 0.000 intron (NM_001145025, intron 8 of 9) intron (NM_001145025, intron 8 of 9) 26864 NM_018217 55741 Hs.720177 NM_018217 ENSG00000088298 EDEM2 C20orf31|C20orf49|bA4204.1 ER degradation enhancing alpha-mannosidase like protein 2 protein-coding chr2-9823 chr2 149157779 149157989 + 7.89 0.000 intron (NM_001317004, intron 3 of 6) intron (NM_001317004, intron 3 of 6) 39710 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr7-8230 chr7 34080545 34080755 + 7.89 0.000 intron (NM_133468, intron 13 of 15) intron (NM_133468, intron 13 of 15) 175111 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr4-2060 chr4 13362709 13362919 + 7.89 0.000 Intergenic Intergenic 121526 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr2-13213 chr2 122343516 122343726 + 7.89 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 587970 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr1-12601 chr1 35673481 35673691 + 7.89 0.000 Intergenic AluSx1|SINE|Alu -32060 NM_001199779 5690 Hs.471441 NM_002794 ENSG00000126067 PSMB2 HC7-I proteasome subunit beta 2 protein-coding chr9-7445 chr9 26485054 26485264 + 7.89 0.000 Intergenic L1MA1|LINE|L1 407643 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding KQ759759.1-3 KQ759759.1 81467 81677 + 7.89 0.000 NA NA NA NA chr13-4462 chr13 113016878 113017088 + 7.89 0.000 intron (NM_001320815, intron 2 of 30) intron (NM_001320815, intron 2 of 30) 15269 NM_001320817 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr3-6609 chr3 126373931 126374141 + 7.89 0.000 Intergenic Intergenic -16628 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr22-2474 chr22 20794432 20794642 + 7.89 0.000 intron (NM_058004, intron 18 of 54) intron (NM_058004, intron 18 of 54) 20424 NM_000185 3053 Hs.474270 NM_000185 ENSG00000099937 SERPIND1 D22S673|HC2|HCF2|HCII|HLS2|LS2|THPH10 serpin family D member 1 protein-coding chr2-8304 chr2 105322667 105322877 + 7.89 0.000 intron (NR_137328, intron 1 of 12) Tigger3b|DNA|TcMar-Tigger 6884 NR_137328 9392 Hs.446350 NM_004257 ENSG00000135966 TGFBRAP1 TRAP-1|TRAP1|VPS3 transforming growth factor beta receptor associated protein 1 protein-coding chr1-13640 chr1 10737663 10737873 + 7.89 0.000 intron (NM_001079843, intron 2 of 20) intron (NM_001079843, intron 2 of 20) 58878 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr17-5738 chr17 58335455 58335665 + 7.89 0.000 TTS (NR_039889) TTS (NR_039889) 462 NR_039889 100616220 NR_039889 ENSG00000264399 MIR4736 - microRNA 4736 ncRNA chr2-13696 chr2 165403330 165403540 + 7.89 0.000 Intergenic Intergenic -66263 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr3-8467 chr3 124484190 124484400 + 7.89 0.000 intron (NM_001024660, intron 28 of 59) intron (NM_001024660, intron 28 of 59) -100363 NM_001322995 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr3-6234 chr3 66473755 66473965 + 7.89 0.000 intron (NM_015541, intron 1 of 18) intron (NM_015541, intron 1 of 18) 26561 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr12-4391 chr12 5831543 5831753 + 7.89 0.000 intron (NM_001278596, intron 5 of 25) intron (NM_001278596, intron 5 of 25) 113611 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr1-11953 chr1 68994736 68994946 + 7.89 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -61057 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr17-4929 chr17 76558597 76558807 + 7.89 0.000 promoter-TSS (NR_004397) promoter-TSS (NR_004397) -88 NR_004397 677850 NR_004397 ENSG00000274091 SNORD1C R38C|snR38C small nucleolar RNA, C/D box 1C snoRNA chrX-1261 chrX 103356413 103356623 + 7.89 0.000 promoter-TSS (NM_016303) promoter-TSS (NM_016303) 12 NM_001006614 51186 Hs.533287 NM_016303 ENSG00000185222 TCEAL9 WBP5|WEX6 transcription elongation factor A like 9 protein-coding chr2-6217 chr2 26542564 26542774 + 7.89 0.000 intron (NM_194248, intron 1 of 46) intron (NM_194248, intron 1 of 46) 16087 NM_001287489 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr10-9100 chr10 126639841 126640051 + 7.89 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) 30564 NM_001350922 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr4-8514 chr4 162227911 162228121 + 7.89 0.000 Intergenic Intergenic -63982 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr4-4578 chr4 75636540 75636750 + 7.89 0.000 Intergenic Intergenic -6117 NM_003948 8999 Hs.591698 NM_003948 ENSG00000138769 CDKL2 KKIAMRE|P56 cyclin dependent kinase like 2 protein-coding chr2-12521 chr2 65092761 65092971 + 7.89 0.000 intron (NM_004161, intron 3 of 5) THE1C|LTR|ERVL-MaLR 36450 NM_015147 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr9-7335 chr9 14250902 14251112 + 7.89 0.000 intron (NR_161383, intron 1 of 7) intron (NR_161383, intron 1 of 7) 49257 NM_001369479 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr9-8744 chr9 132792829 132793039 + 7.89 0.000 intron (NM_001317959, intron 12 of 14) intron (NM_001317959, intron 12 of 14) -85410 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr2-4667 chr2 202370789 202370999 + 7.89 0.000 Intergenic LTR16|LTR|ERVL -5433 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chrX-3155 chrX 21740384 21740594 + 7.89 0.000 intron (NR_045617, intron 3 of 5) intron (NR_045617, intron 3 of 5) 17627 NR_045617 23676 Hs.86492 NM_014332 ENSG00000091482 SMPX DFN6|DFNX4 small muscle protein X-linked protein-coding chr2-4758 chr2 17757453 17757663 + 7.89 0.000 intron (NM_001130009, intron 1 of 13) intron (NM_001130009, intron 1 of 13) 3420 NM_001130009 348654 Hs.467793 NM_182625 ENSG00000178295 GEN1 Gen GEN1 Holliday junction 5' flap endonuclease protein-coding chr7-7009 chr7 126151929 126152139 + 7.89 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -887743 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr2-12746 chr2 84820746 84820956 + 7.89 0.000 TTS (NM_001277053) TTS (NM_001277053) 60233 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr16-4040 chr16 1164296 1164506 + 7.89 0.000 intron (NM_001005407, intron 2 of 33) AluJb|SINE|Alu 11160 NM_001005407 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr10-4205 chr10 110474483 110474693 + 7.89 0.000 Intergenic L2b|LINE|L2 -23319 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr5-3382 chr5 141412866 141413076 + 7.89 0.000 promoter-TSS (NM_018913) promoter-TSS (NM_018913) -205 NM_032090 56106 Hs.368160 NM_018913 ENSG00000253846 PCDHGA10 PCDH-GAMMA-A10 protocadherin gamma subfamily A, 10 protein-coding chr1-9796 chr1 58035605 58035815 + 7.89 0.000 intron (NM_001353980, intron 1 of 5) MER91C|DNA|hAT-Tip100 175129 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr10-3857 chr10 21550211 21550421 + 7.89 0.000 intron (NM_001195626, intron 3 of 22) intron (NM_001195626, intron 3 of 22) 16144 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr1-8405 chr1 83791872 83792082 + 7.89 0.000 intron (NR_119375, intron 1 of 2) intron (NR_119375, intron 1 of 2) 68569 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr2-8276 chr2 101743772 101743982 + 7.89 0.000 intron (NM_145686, intron 2 of 30) AluSx|SINE|Alu 46170 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr3-5405 chr3 159319356 159319566 + 7.89 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 36815 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr15-2998 chr15 54641332 54641542 + 7.89 0.000 Intergenic Intergenic -415310 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr1-5969 chr1 33317458 33317668 + 7.89 0.000 intron (NM_001080438, intron 1 of 4) intron (NM_001080438, intron 1 of 4) 3535 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding chr2-3186 chr2 213469537 213469747 + 7.89 0.000 intron (NR_047660, intron 8 of 14) HERVL-int|LTR|ERVL 185178 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr1-7294 chr1 241707099 241707309 + 7.89 0.000 intron (NM_001367482, intron 8 of 27) L2a|LINE|L2 54923 NM_001367482 128025 Hs.97527 NM_144625 ENSG00000162843 WDR64 - WD repeat domain 64 protein-coding chr1-7518 chr1 156443512 156443722 + 7.89 0.000 Intergenic Intergenic -14069 NR_135262 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr12-2053 chr12 102551086 102551296 + 7.89 0.000 Intergenic Intergenic -70628 NM_000618 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr19-2059 chr19 8406889 8407099 + 7.89 0.000 Intergenic AluSc8|SINE|Alu -6309 NM_001005415 51257 Hs.631861 NM_016496 ENSG00000099785 MARCH2 HSPC240|MARCH-II|RNF172 membrane associated ring-CH-type finger 2 protein-coding chr13-1791 chr13 23510227 23510437 + 7.89 0.000 Intergenic Intergenic 40820 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr22-2752 chr22 39919964 39920174 + 7.89 0.000 intron (NM_004810, intron 1 of 7) intron (NM_004810, intron 1 of 7) -6535 NM_001291824 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chr9-4153 chr9 351380 351590 + 7.89 0.000 intron (NM_001193536, intron 13 of 46) intron (NM_001193536, intron 13 of 46) 78437 NM_001193536 81704 Hs.132599 NM_203447 ENSG00000107099 DOCK8 HEL-205|MRD2|ZIR8 dedicator of cytokinesis 8 protein-coding chr5-5173 chr5 110112066 110112276 + 7.89 0.000 Intergenic Intergenic 228989 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr8-3037 chr8 140167166 140167376 + 7.89 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -66736 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr22-3767 chr22 28021244 28021454 + 7.89 0.000 intron (NM_001145418, intron 13 of 22) intron (NM_001145418, intron 13 of 22) -100737 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr12-3709 chr12 5911999 5912209 + 7.89 0.000 intron (NM_001278596, intron 3 of 25) intron (NM_001278596, intron 3 of 25) 33155 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr3-3885 chr3 41540242 41540452 + 7.89 0.000 intron (NR_136342, intron 30 of 34) L1PA7|LINE|L1 340842 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr1-15782 chr1 175465988 175466198 + 7.89 0.000 intron (NM_003285, intron 2 of 22) MIRb|SINE|MIR -273106 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr17-4878 chr17 67056784 67056994 + 7.89 0.000 TTS (NM_000727) TTS (NM_000727) 12335 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chrX-916 chrX 9850703 9850913 + 7.89 0.000 intron (NM_001649, intron 1 of 9) AluJb|SINE|Alu -61564 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr8-7120 chr8 119874542 119874752 + 7.89 0.000 intron (NM_001283012, intron 1 of 6) intron (NM_001283012, intron 1 of 6) 925 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr4-6348 chr4 99051761 99051971 + 7.89 0.000 intron (NM_015143, intron 9 of 10) intron (NM_015143, intron 9 of 10) 36922 NM_000671 128 Hs.78989 NM_000671 ENSG00000197894 ADH5 ADH-3|ADHX|FALDH|FDH|GSH-FDH|GSNOR|HEL-S-60p alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding chr9-6890 chr9 88759090 88759300 + 7.89 0.000 Intergenic Intergenic -13290 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr20-2725 chr20 49116995 49117205 + 7.89 0.000 intron (NM_004602, intron 12 of 13) intron (NM_004602, intron 12 of 13) 70788 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr2-13031 chr2 108604365 108604575 + 7.89 0.000 intron (NM_001193488, intron 1 of 9) intron (NM_001193488, intron 1 of 9) -2677 NM_001193482 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr8-4331 chr8 99972997 99973207 + 7.89 0.000 intron (NM_015668, intron 23 of 27) L1PA8|LINE|L1 -31480 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr2-12293 chr2 46575827 46576037 + 7.89 0.000 intron (NR_104182, intron 1 of 1) intron (NR_104182, intron 1 of 1) 4306 NR_104182 100506142 Hs.658541 NR_104182 ENSG00000250116 LOC100506142 - uncharacterized LOC100506142 ncRNA chr7-4158 chr7 100391084 100391294 + 7.89 0.000 intron (NM_013439, intron 3 of 6) AluJr|SINE|Alu 17702 NM_178273 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr17-6832 chr17 15157256 15157466 + 7.89 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -51174 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr4-3896 chr4 145570447 145570657 + 7.89 0.000 Intergenic L1PREC2|LINE|L1 -48833 NM_172250 166785 Hs.452864 NM_172250 ENSG00000151611 MMAA cblA metabolism of cobalamin associated A protein-coding chr6-6148 chr6 361844 362054 + 7.89 0.000 Intergenic Intergenic -29803 NR_046000 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr1-11130 chr1 233575821 233576031 + 7.89 0.000 Intergenic MLT1D-int|LTR|ERVL-MaLR -38180 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr11-5195 chr11 11910190 11910400 + 7.89 0.000 intron (NM_001282659, intron 8 of 27) L1MD2|LINE|L1 68872 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr9-8278 chr9 112834771 112834981 + 7.89 0.000 intron (NM_001012994, intron 4 of 8) (AC)n|Simple_repeat|Simple_repeat 56000 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr6-7081 chr6 33924703 33924913 + 7.89 0.000 Intergenic Intergenic 25673 NR_106982 102466816 NR_106982 ENSG00000276824 MIR7159 hsa-mir-7159 microRNA 7159 ncRNA chr1-5206 chr1 179867774 179867984 + 7.89 0.000 intron (NM_001349934, intron 1 of 6) L2|LINE|L2 961 NM_001349933 163590 Hs.571797 NM_022347 ENSG00000169905 TOR1AIP2 IFRG15|LULL1|NET9 torsin 1A interacting protein 2 protein-coding chr8-4621 chr8 132442104 132442314 + 7.89 0.000 intron (NM_004519, intron 1 of 14) L1PA13|LINE|L1 5053 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr6-2655 chr6 1477599 1477809 + 7.89 0.000 Intergenic Intergenic -87293 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr8-4183 chr8 81117461 81117671 + 7.89 0.000 Intergenic Intergenic -5498 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr7-9411 chr7 132204000 132204210 + 7.89 0.000 intron (NM_020911, intron 10 of 31) intron (NM_020911, intron 10 of 31) -56756 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr12-5595 chr12 44583214 44583424 + 7.89 0.000 intron (NM_006159, intron 16 of 20) L2a|LINE|L2 292342 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr1-15198 chr1 110065167 110065377 + 7.89 0.000 intron (NM_006492, intron 1 of 3) intron (NM_006492, intron 1 of 3) 5400 NM_006492 257 Hs.669953 NM_006492 ENSG00000156150 ALX3 FND|FND1 ALX homeobox 3 protein-coding chr2-3796 chr2 19608351 19608561 + 7.89 0.000 Intergenic Intergenic -249833 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr11-9452 chr11 61341569 61341779 + 7.89 0.000 intron (NM_001351977, intron 6 of 17) intron (NM_001351977, intron 6 of 17) 8446 NM_015533 26007 Hs.6278 NM_015533 ENSG00000149476 TKFC DAK|NET45 triokinase and FMN cyclase protein-coding chrX-5360 chrX 149721938 149722148 + 7.89 0.000 Intergenic HERVK22-int|LTR|ERVK 9983 NM_005366 4110 Hs.670252 NM_005366 ENSG00000185247 MAGEA11 CT1.11|MAGE-11|MAGE11|MAGEA-11 MAGE family member A11 protein-coding chr8-6558 chr8 69628125 69628335 + 7.89 0.000 exon (NM_001128204, exon 17 of 22) exon (NM_001128204, exon 17 of 22) 35330 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr19-3847 chr19 17125068 17125278 + 7.89 0.000 intron (NM_001130065, intron 2 of 39) AluSz|SINE|Alu 32938 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chr11-5563 chr11 101583588 101583798 + 7.89 0.000 5' UTR (NM_004621, exon 1 of 13) 5' UTR (NM_004621, exon 1 of 13) 314 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr3-9576 chr3 54452712 54452922 + 7.89 0.000 intron (NM_018398, intron 4 of 37) MLT1C|LTR|ERVL-MaLR 187040 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr16-5627 chr16 62200026 62200236 + 7.89 0.000 Intergenic Intergenic -163693 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr15-2644 chr15 72047086 72047296 + 7.89 0.000 intron (NM_006901, intron 1 of 41) intron (NM_006901, intron 1 of 41) -67067 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr9-3236 chr9 137263078 137263288 + 7.89 0.000 exon (NM_015456, exon 5 of 13) exon (NM_015456, exon 5 of 13) 7856 NM_015456 25920 Hs.521809 NM_015456 ENSG00000188986 NELFB COBRA1|NELF-B negative elongation factor complex member B protein-coding chr8-4164 chr8 78437514 78437724 + 7.89 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -78721 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr14-5181 chr14 92662790 92663000 + 7.89 0.000 intron (NM_024832, intron 7 of 9) FRAM|SINE|Alu 85732 NM_005606 5641 Hs.18069 NM_005606 ENSG00000100600 LGMN AEP|LGMN1|PRSC1 legumain protein-coding chr10-5833 chr10 112349604 112349814 + 7.89 0.000 intron (NR_028134, intron 3 of 18) LTR12E|LTR|ERV1 6886 NR_028134 390003 Hs.534691 NR_028134 ENSG00000243316 GUCY2GP GUCY2G guanylate cyclase 2G, pseudogene pseudo chr6-7277 chr6 43291237 43291447 + 7.89 0.000 Intergenic Intergenic -6918 NM_006672 10864 Hs.485438 NM_006672 ENSG00000137204 SLC22A7 NLT|OAT2|hOAT11 solute carrier family 22 member 7 protein-coding chr2-11118 chr2 133118110 133118320 + 7.89 0.000 intron (NM_207481, intron 6 of 17) L2b|LINE|L2 -147980 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chrX-1060 chrX 124931813 124932023 + 7.89 0.000 intron (NM_014253, intron 1 of 30) intron (NM_014253, intron 1 of 30) 31899 NM_001163279 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr6-4069 chr6 138590882 138591092 + 7.89 0.000 Intergenic MIRb|SINE|MIR -18418 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr4-6851 chr4 9674215 9674425 + 7.89 0.000 Intergenic Intergenic -107314 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chrX-2631 chrX 109980288 109980498 + 7.89 0.000 Intergenic L2-3_Crp|LINE|L2 -22242 NM_001353851 84187 Hs.496572 NM_017698 ENSG00000157600 TMEM164 bB360B22.3 transmembrane protein 164 protein-coding chr11-7832 chr11 112789634 112789844 + 7.89 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -171681 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr12-3252 chr12 64526452 64526662 + 7.89 0.000 Intergenic AluJr|SINE|Alu 74437 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr9-7244 chr9 3536224 3536434 + 7.89 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -10328 NM_134428 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr8-3463 chr8 95800783 95800993 + 7.89 0.000 intron (NR_038204, intron 3 of 3) intron (NR_038204, intron 3 of 3) 147460 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr3-5249 chr3 106982507 106982717 + 7.89 0.000 Intergenic Intergenic 258026 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr18-2996 chr18 24487726 24487936 + 7.89 0.000 Intergenic Intergenic 27194 NM_021624 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr5-3267 chr5 108590833 108591043 + 7.89 0.000 Intergenic Intergenic 137323 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr1-9100 chr1 16946920 16947130 + 7.89 0.000 intron (NM_014675, intron 17 of 36) intron (NM_014675, intron 17 of 36) 25094 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr11-3915 chr11 120555055 120555265 + 7.89 0.000 intron (NM_014619, intron 1 of 20) intron (NM_014619, intron 1 of 20) -9276 NM_001282470 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr1-10388 chr1 156367320 156367530 + 7.89 0.000 Intergenic Intergenic -1786 NM_001256395 57127 Hs.131835 NM_020407 ENSG00000132677 RHBG SLC42A2 Rh family B glycoprotein (gene/pseudogene) protein-coding chr16-7083 chr16 89051384 89051594 + 7.89 0.000 Intergenic Intergenic -42320 NM_001243279 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr16-6629 chr16 67976302 67976512 + 7.89 0.000 intron (NM_001370198, intron 8 of 9) intron (NM_001370198, intron 8 of 9) 4092 NM_001129758 64180 Hs.302028 NM_022357 ENSG00000141096 DPEP3 MBD3 dipeptidase 3 protein-coding chr22-3161 chr22 27794017 27794227 + 7.89 0.000 intron (NM_002430, intron 1 of 1) intron (NM_002430, intron 1 of 1) 7634 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr9-4859 chr9 2193495 2193705 + 7.89 0.000 TTS (NM_001289399) TTS (NM_001289399) 35144 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr2-13601 chr2 158633625 158633835 + 7.89 0.000 intron (NM_001304970, intron 8 of 21) intron (NM_001304970, intron 8 of 21) 101272 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr9-4431 chr9 14839802 14840012 + 7.89 0.000 intron (NR_163238, intron 11 of 30) intron (NR_163238, intron 11 of 30) -59476 NM_001370061 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr22-2990 chr22 50600082 50600292 + 7.89 0.000 promoter-TSS (NM_012324) promoter-TSS (NM_012324) -606 NM_012324 23542 Hs.558180 NM_012324 ENSG00000008735 MAPK8IP2 IB-2|IB2|JIP2|PRKM8IPL mitogen-activated protein kinase 8 interacting protein 2 protein-coding chr4-2613 chr4 139840874 139841084 + 7.89 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 175160 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr1-10932 chr1 211455923 211456133 + 7.89 0.000 Intergenic L1PA5|LINE|L1 36889 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr1-11092 chr1 229052773 229052983 + 7.89 0.000 Intergenic Intergenic 121923 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr19-2556 chr19 49824546 49824756 + 7.89 0.000 intron (NM_030973, intron 3 of 17) intron (NM_030973, intron 3 of 17) 6372 NM_030973 81857 Hs.656639 NM_030973 ENSG00000104973 MED25 ACID1|ARC92|BVSYS|CMT2B2|P78|PTOV2|TCBAP0758 mediator complex subunit 25 protein-coding chr11-5949 chr11 16946126 16946336 + 7.89 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -20209 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr1-7251 chr1 227918463 227918673 + 7.89 0.000 TTS (NM_003395) TTS (NM_003395) 23115 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr22-2282 chr22 34905347 34905557 + 7.89 0.000 intron (NR_138042, intron 1 of 4) MER21A|LTR|ERVL 92464 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chrX-4434 chrX 54570265 54570475 + 7.89 0.000 Intergenic L1MEc|LINE|L1 40151 NM_001184819 54552 Hs.654677 NM_019067 ENSG00000130119 GNL3L GNL3B G protein nucleolar 3 like protein-coding chr4-8116 chr4 126516944 126517154 + 7.89 0.000 Intergenic L1MEc|LINE|L1 1009790 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr10-7273 chr10 129055354 129055564 + 7.89 0.000 Intergenic Intergenic 142626 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr13-2282 chr13 28741076 28741286 + 7.89 0.000 Intergenic MIRc|SINE|MIR -22168 NM_001347960 283537 Hs.117167 NM_181785 ENSG00000139508 SLC46A3 FKSG16 solute carrier family 46 member 3 protein-coding chr4-5137 chr4 152690673 152690883 + 7.89 0.000 Intergenic LTR51|LTR|ERV1 -10781 NM_152680 201799 Hs.518900 NM_152680 ENSG00000170006 TMEM154 - transmembrane protein 154 protein-coding chr19-4126 chr19 18514703 18514913 + 7.89 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 7262 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr12-3080 chr12 11705295 11705505 + 7.89 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 55546 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr3-9169 chr3 33873765 33873975 + 7.89 0.000 Intergenic L1MC2|LINE|L1 75240 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chrX-3267 chrX 91371687 91371897 + 7.89 0.000 Intergenic L1PREC2|LINE|L1 -63047 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr4-8126 chr4 126839373 126839583 + 7.89 0.000 Intergenic Intergenic -793479 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr19-5954 chr19 58315732 58315942 + 7.89 0.000 TTS (NR_144447) TTS (NR_144447) 10463 NR_144445 105372481 Hs.435404 NR_144445 ENSG00000142396 ERVK3-1 - endogenous retrovirus group K3 member 1 ncRNA chr12-5473 chr12 124611568 124611778 + 7.89 0.000 Intergenic Intergenic -44061 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr5-4486 chr5 9543907 9544117 + 7.89 0.000 intron (NM_003966, intron 1 of 22) intron (NM_003966, intron 1 of 22) 2063 NM_003966 9037 Hs.27621 NM_003966 ENSG00000112902 SEMA5A SEMAF|semF semaphorin 5A protein-coding chr5-6397 chr5 144924788 144924998 + 7.89 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 719502 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr5-4866 chr5 64908548 64908758 + 7.89 0.000 intron (NM_005869, intron 11 of 13) L1PA6|LINE|L1 139723 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr12-3130 chr12 33912584 33912794 + 7.89 0.000 Intergenic L1PA6|LINE|L1 -109807 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chrX-3121 chrX 8504559 8504769 + 7.89 0.000 Intergenic Intergenic 39834 NM_001001888 425054 Hs.279737 NM_001001888 ENSG00000205642 VCX3B VCX-C|VCXC variable charge X-linked 3B protein-coding chr18-3134 chr18 38883364 38883574 + 7.89 0.000 Intergenic Intergenic 738706 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr9-8393 chr9 118969409 118969619 + 7.89 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 289843 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr5-5801 chr5 176492420 176492630 + 7.89 0.000 intron (NM_014613, intron 5 of 10) intron (NM_014613, intron 5 of 10) 44140 NM_014613 23197 Hs.484242 NM_014613 ENSG00000113194 FAF2 ETEA|UBXD8|UBXN3B Fas associated factor family member 2 protein-coding chr2-4808 chr2 48849302 48849512 + 7.89 0.000 Intergenic AluSx|SINE|Alu -93683 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr19-4916 chr19 42524630 42524840 + 7.89 0.000 intron (NM_001184813, intron 2 of 7) intron (NM_001184813, intron 2 of 7) 3746 NM_001184813 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr15-3071 chr15 62337742 62337952 + 7.89 0.000 Intergenic AluJr|SINE|Alu -5182 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr16-3870 chr16 69779795 69780005 + 7.89 0.000 intron (NM_007014, intron 2 of 24) L1ME3Cz|LINE|L1 17568 NM_007014 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr22-3383 chr22 31501601 31501811 + 7.89 0.000 intron (NM_001258326, intron 1 of 30) MIRb|SINE|MIR 5170 NM_001258326 9814 Hs.62209 NM_014775 ENSG00000198089 SFI1 PISD|PPP1R139|hSfi1p SFI1 centrin binding protein protein-coding chr3-6452 chr3 105691093 105691303 + 7.89 0.000 intron (NR_135809, intron 14 of 18) intron (NR_135809, intron 14 of 18) 176393 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr8-6913 chr8 102429768 102429978 + 7.89 0.000 Intergenic L2b|LINE|L2 -17173 NM_015902 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr13-3782 chr13 44878846 44879056 + 7.89 0.000 Intergenic LTR16E2|LTR|ERVL -69321 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr19-4447 chr19 4657262 4657472 + 7.89 0.000 TTS (NM_019107) TTS (NM_019107) 13036 NM_019107 56005 Hs.465645 NM_019107 ENSG00000074842 MYDGF C19orf10|EUROIMAGE1875335|IL25|IL27|IL27w|R33729_1|SF20 myeloid derived growth factor protein-coding chr5-8552 chr5 135872067 135872277 + 7.89 0.000 intron (NR_146141, intron 5 of 8) MIRb|SINE|MIR 23669 NM_000590 3578 Hs.960 NM_000590 ENSG00000145839 IL9 HP40|IL-9|P40 interleukin 9 protein-coding chr10-9015 chr10 122139041 122139251 + 7.89 0.000 intron (NM_001291876, intron 6 of 19) Tigger19a|DNA|TcMar-Tigger -24484 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr2-6735 chr2 32900222 32900432 + 7.89 0.000 intron (NR_027099, intron 9 of 10) intron (NR_027099, intron 9 of 10) -26800 NR_027097 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr15-3608 chr15 65653425 65653635 + 7.89 0.000 intron (NM_001301033, intron 10 of 11) intron (NM_001301033, intron 10 of 11) 10651 NM_001254740 9187 Hs.173092 NM_004727 ENSG00000074621 SLC24A1 CSNB1D|HsT17412|NCKX|NCKX1|RODX solute carrier family 24 member 1 protein-coding chr10-8976 chr10 119390859 119391069 + 7.89 0.000 intron (NM_005308, intron 3 of 15) intron (NM_005308, intron 3 of 15) 12992 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr11-7400 chr11 86117186 86117396 + 7.89 0.000 Intergenic MIRc|SINE|MIR -47431 NM_001206947 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr12-6553 chr12 118222518 118222728 + 7.89 0.000 intron (NM_001346490, intron 10 of 21) L1PB3|LINE|L1 -32088 NM_001346495 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr19-5898 chr19 47465666 47465876 + 7.89 0.000 exon (NM_015063, exon 2 of 10) exon (NM_015063, exon 2 of 10) 6122 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr10-9005 chr10 121747443 121747653 + 7.89 0.000 intron (NM_001001976, intron 11 of 11) LTR33A_|LTR|ERVL -149090 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr1-10450 chr1 160320749 160320959 + 7.89 0.000 intron (NM_001098398, intron 8 of 32) L1MA4|LINE|L1 3589 NR_002190 474338 Hs.621179 NR_002190 SUMO1P3 - SUMO1 pseudogene 3 pseudo chr1-13114 chr1 193602141 193602351 + 7.89 0.000 Intergenic Intergenic 297501 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr21-1720 chr21 32647385 32647595 + 7.89 0.000 intron (NM_203446, intron 23 of 32) L2b|LINE|L2 -34619 NM_001350335 56683 Hs.5811 NM_017835 ENSG00000159079 CFAP298 C21orf48|C21orf59|CILD26|FBB18|Kur cilia and flagella associated protein 298 protein-coding chr9-5539 chr9 108740524 108740734 + 7.89 0.000 Intergenic L1ME2|LINE|L1 115357 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr5-6560 chr5 16234735 16234945 + 7.89 0.000 Intergenic Intergenic 54599 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA chr12-5971 chr12 89815846 89816056 + 7.89 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -106585 NM_001366526 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr4-6881 chr4 12570265 12570475 + 7.89 0.000 Intergenic Intergenic 346919 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr4-6343 chr4 95304920 95305130 + 7.89 0.000 intron (NM_003728, intron 2 of 15) intron (NM_003728, intron 2 of 15) 213534 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr20-3829 chr20 24296179 24296389 + 7.89 0.000 Intergenic Intergenic 96517 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr1-8553 chr1 165328445 165328655 + 7.89 0.000 intron (NM_177398, intron 3 of 8) intron (NM_177398, intron 3 of 8) 27691 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr12-8164 chr12 121505858 121506068 + 7.89 0.000 intron (NM_001005366, intron 11 of 22) intron (NM_001005366, intron 11 of 22) -61611 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr7-8507 chr7 53300406 53300616 + 7.89 0.000 Intergenic Intergenic 264878 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr5-8420 chr5 127627592 127627802 + 7.89 0.000 Intergenic Intergenic -21324 NM_001048252 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding chr13-3255 chr13 34727702 34727912 + 7.89 0.000 Intergenic L1MEc|LINE|L1 -87122 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr15-1127 chr15 42121795 42122005 + 7.89 0.000 Intergenic Intergenic -27338 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr10-7489 chr10 11515736 11515946 + 7.89 0.000 intron (NM_014688, intron 5 of 14) intron (NM_014688, intron 5 of 14) 16439 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr18-1809 chr18 13316471 13316681 + 7.89 0.000 intron (NM_181482, intron 2 of 5) L1MEg|LINE|L1 38471 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr6-7754 chr6 93075592 93075802 + 7.89 0.000 Intergenic MER34A|LTR|ERV1 343862 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr2-3960 chr2 69013293 69013503 + 7.89 0.000 5' UTR (NM_053034, exon 1 of 15) 5' UTR (NM_053034, exon 1 of 15) 254 NM_053034 84168 Hs.165859 NM_018153 ENSG00000169604 ANTXR1 ATR|GAPO|TEM8 ANTXR cell adhesion molecule 1 protein-coding chr5-7665 chr5 53894369 53894579 + 7.89 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) 57125 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr1-15276 chr1 115282810 115283020 + 7.89 0.000 promoter-TSS (NR_157569) promoter-TSS (NR_157569) -119 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr9-3816 chr9 129140821 129141031 + 7.89 0.000 intron (NM_178001, intron 9 of 10) intron (NM_178001, intron 9 of 10) 29238 NM_001193397 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr3-4266 chr3 150503744 150503954 + 7.89 0.000 Intergenic L1M2a|LINE|L1 42647 NM_014445 27230 Hs.518326 NM_014445 ENSG00000120742 SERP1 RAMP4 stress associated endoplasmic reticulum protein 1 protein-coding chr11-3913 chr11 120146565 120146775 + 7.89 0.000 Intergenic MIR|SINE|MIR -8557 NM_012101 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr1-7539 chr1 178288436 178288646 + 7.89 0.000 intron (NM_170692, intron 2 of 17) L2a|LINE|L2 -52910 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr7-4477 chr7 137074486 137074696 + 7.89 0.000 intron (NR_046103, intron 1 of 3) intron (NR_046103, intron 1 of 3) 89750 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA chr2-6567 chr2 221647469 221647679 + 7.89 0.000 Intergenic Intergenic -73372 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr1-6871 chr1 114130737 114130947 + 7.89 0.000 intron (NM_001366223, intron 3 of 7) intron (NM_001366223, intron 3 of 7) 21598 NM_205848 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr20-1078 chr20 35467607 35467817 + 7.89 0.000 intron (NM_007186, intron 9 of 34) intron (NM_007186, intron 9 of 34) 7729 NM_001318219 11190 Hs.443976 NM_007186 ENSG00000126001 CEP250 C-NAP1|CEP2|CNAP1|CRDHL2 centrosomal protein 250 protein-coding chr6-3252 chr6 148611366 148611576 + 7.89 0.000 Intergenic Intergenic 102320 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr7-6464 chr7 2538803 2539013 + 7.89 0.000 exon (NM_001350626, exon 14 of 14) exon (NM_001350626, exon 14 of 14) 11834 NR_039791 100616116 NR_039791 ENSG00000264357 MIR4648 - microRNA 4648 ncRNA chrX-2068 chrX 19657661 19657871 + 7.89 0.000 intron (NM_001024666, intron 5 of 16) L1MB3|LINE|L1 13233 NM_001353897 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr3-7635 chr3 27083133 27083343 + 7.89 0.000 Intergenic L2a|LINE|L2 133285 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr1-8641 chr1 203271125 203271335 + 7.89 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -15922 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr10-4795 chr10 7415418 7415628 + 7.89 0.000 Intergenic Intergenic -4037 NM_001029880 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr14-4144 chr14 74414743 74414953 + 7.89 0.000 intron (NM_001105579, intron 1 of 3) intron (NM_001105579, intron 1 of 3) 11362 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr4-4210 chr4 15376701 15376911 + 7.89 0.000 intron (NM_001135171, intron 1 of 2) MIRb|SINE|MIR 2255 NM_001135171 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr20-3689 chr20 14260330 14260540 + 7.89 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) 77177 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr1-13725 chr1 15549217 15549427 + 7.89 0.000 intron (NR_109898, intron 7 of 14) L2|LINE|L2 7156 NR_135613 107397391 NR_135613 ENSG00000251866 SCARNA21B - small Cajal body-specific RNA 21B ncRNA chr7-6308 chr7 140418539 140418749 + 7.89 0.000 intron (NM_001008749, intron 3 of 3) AluJr|SINE|Alu 14586 NM_001008749 401409 Hs.583545 NM_001008749 ENSG00000146955 RAB19 RAB19B RAB19, member RAS oncogene family protein-coding chr4-3247 chr4 82721899 82722109 + 7.89 0.000 intron (NM_001037582, intron 1 of 4) intron (NM_001037582, intron 1 of 4) 31426 NR_030301 693160 NR_030301 ENSG00000207746 MIR575 MIRN575|hsa-mir-575 microRNA 575 ncRNA chr16-4422 chr16 52217819 52218029 + 7.89 0.000 Intergenic Intergenic -40640 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA chr11-4661 chr11 47358822 47359032 + 7.89 0.000 exon (NM_003120, exon 4 of 5) exon (NM_003120, exon 4 of 5) -6225 NM_000256 4607 Hs.524906 NM_000256 ENSG00000134571 MYBPC3 CMD1MM|CMH4|FHC|LVNC10|MYBP-C myosin binding protein C, cardiac protein-coding chr8-5486 chr8 51387321 51387531 + 7.89 0.000 intron (NM_144651, intron 17 of 22) intron (NM_144651, intron 17 of 22) 422019 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr13-3777 chr13 44132846 44133056 + 7.89 0.000 intron (NR_104065, intron 1 of 4) intron (NR_104065, intron 1 of 4) -9377 NR_104064 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr4-2328 chr4 145404855 145405065 + 7.89 0.000 Intergenic Intergenic -64541 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr1-11599 chr1 215376568 215376778 + 7.89 0.000 Intergenic Intergenic -190631 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr21-932 chr21 39467812 39468022 + 7.89 0.000 intron (NM_001317740, intron 2 of 5) intron (NM_001317740, intron 2 of 5) 16063 NM_007341 6450 Hs.473847 NM_007341 ENSG00000185437 SH3BGR 21-GARP SH3 domain binding glutamate rich protein protein-coding chr18-2573 chr18 8433371 8433581 + 7.89 0.000 Intergenic Intergenic -66442 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr21-1056 chr21 29018157 29018367 + 7.89 0.000 intron (NM_001320724, intron 1 of 5) L2a|LINE|L2 1087 NM_016940 10069 Hs.713123 NM_016940 ENSG00000156253 RWDD2B C21orf6|GL011 RWD domain containing 2B protein-coding chr5-2545 chr5 173498071 173498281 + 7.89 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -81458 NR_027109 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr17-1757 chr17 16991206 16991416 + 7.89 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 2982 NR_146886 105371562 Hs.579259 NR_146886 ENSG00000230969 LINC02090 - long intergenic non-protein coding RNA 2090 ncRNA chr22-4282 chr22 49589928 49590138 + 7.89 0.000 intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) -46567 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr10-3102 chr10 24891959 24892169 + 7.89 0.000 intron (NM_020200, intron 3 of 8) L1MA6|LINE|L1 60542 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr9-8466 chr9 123438307 123438517 + 7.89 0.000 intron (NM_001352968, intron 18 of 18) intron (NM_001352968, intron 18 of 18) -35809 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr2-4901 chr2 136530165 136530375 + 7.89 0.000 Intergenic Intergenic -235275 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr16-3239 chr16 86193529 86193739 + 7.89 0.000 Intergenic Intergenic -2547 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr1-14990 chr1 90570702 90570912 + 7.89 0.000 Intergenic L2|LINE|L2 -86943 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr6-1911 chr6 34046545 34046755 + 7.89 0.000 intron (NM_001256809, intron 4 of 8) LTR16E1|LTR|ERVL -46599 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chrX-2255 chrX 47371860 47372070 + 7.89 0.000 intron (NM_003446, intron 1 of 3) L1MD1|LINE|L1 1365 NM_003446 7712 Hs.89897 NM_003446 ENSG00000147117 ZNF157 HZF22 zinc finger protein 157 protein-coding chr6-6631 chr6 152205162 152205372 + 7.89 0.000 intron (NM_182961, intron 126 of 145) intron (NM_182961, intron 126 of 145) -19889 NM_001347701 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr3-6522 chr3 114879362 114879572 + 7.89 0.000 intron (NM_001164343, intron 3 of 11) intron (NM_001164343, intron 3 of 11) 6434 NR_126422 104413890 Hs.612732 NR_126422 ENSG00000239946 ZBTB20-AS3 - ZBTB20 antisense RNA 3 ncRNA chr9-5337 chr9 88523412 88523622 + 7.89 0.000 Intergenic Intergenic -11584 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr15-1936 chr15 92571141 92571351 + 7.89 0.000 non-coding (NR_021493, exon 1 of 4) non-coding (NR_021493, exon 1 of 4) 1017 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 - long intergenic non-protein coding RNA 930 ncRNA chr6-3790 chr6 23990733 23990943 + 7.89 0.000 Intergenic L1PA4|LINE|L1 -135377 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr11-7313 chr11 60232587 60232797 + 7.89 0.000 intron (NM_001351235, intron 1 of 5) L1M2a|LINE|L1 10445 NM_001351235 643680 Hs.559934 NM_001351235 MS4A4E - membrane spanning 4-domains A4E protein-coding chr15-4363 chr15 41582604 41582814 + 7.89 0.000 3' UTR (NM_006293, exon 19 of 19) 3' UTR (NM_006293, exon 19 of 19) 22737 NM_001330264 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chrX-3954 chrX 11435665 11435875 + 7.89 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) -7952 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr2-7284 chr2 235906824 235907034 + 7.89 0.000 intron (NM_001037131, intron 10 of 17) AluSx|SINE|Alu 261457 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr1-14550 chr1 52328815 52329025 + 7.89 0.000 intron (NM_007324, intron 12 of 17) intron (NM_007324, intron 12 of 17) 37285 NM_001330585 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr7-7346 chr7 51045657 51045867 + 7.89 0.000 intron (NM_015198, intron 7 of 12) intron (NM_015198, intron 7 of 12) -252309 NM_001371008 chr14-3879 chr14 90933025 90933235 + 7.89 0.000 intron (NM_001322234, intron 5 of 16) L2-3_Crp|LINE|L2 -116700 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr12-6339 chr12 56480547 56480757 + 7.89 0.000 TTS (NM_207344) TTS (NM_207344) 7509 NM_001280796 27165 Hs.212606 NM_013267 ENSG00000135423 GLS2 GA|GLS|LGA|hLGA glutaminase 2 protein-coding chr6-5823 chr6 20342319 20342529 + 7.89 0.000 Intergenic AluSc8|SINE|Alu -59455 NM_001949 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chr14-2504 chr14 103296056 103296266 + 7.89 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -21123 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr14-4673 chr14 55847291 55847501 + 7.89 0.000 Intergenic Intergenic -50722 NR_026796 645687 Hs.569345 NR_026796 ENSG00000258791 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA chr3-8387 chr3 96872104 96872314 + 7.89 0.000 intron (NM_001080448, intron 2 of 17) intron (NM_001080448, intron 2 of 17) 57615 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr2-11147 chr2 142877334 142877544 + 7.89 0.000 promoter-TSS (NM_003937) promoter-TSS (NM_003937) -225 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr6-7245 chr6 41609942 41610152 + 7.89 0.000 Intergenic L2c|LINE|L2 11324 NR_039784 100616178 NR_039784 ENSG00000266494 MIR4641 - microRNA 4641 ncRNA chr1-7943 chr1 174497218 174497428 + 7.89 0.000 intron (NM_001366446, intron 13 of 25) intron (NM_001366446, intron 13 of 25) 49359 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr1-5828 chr1 226209366 226209576 + 7.89 0.000 Intergenic Intergenic -14193 NM_031944 83881 Hs.282079 NM_031944 ENSG00000185155 MIXL1 MILD1|MIX|MIXL Mix paired-like homeobox protein-coding chr16-2123 chr16 3189243 3189453 + 7.89 0.000 intron (NM_012360, intron 1 of 2) CpG 226 NM_012360 4992 Hs.664502 NM_012360 ENSG00000168124 OR1F1 OLFMF|OR16-36|OR16-37|OR16-88|OR16-89|OR16-90|OR1F10|OR1F13P|OR1F4|OR1F5|OR1F6|OR1F7|OR1F8|OR1F9|OR3-145|ORL1023 olfactory receptor family 1 subfamily F member 1 protein-coding chr6-7021 chr6 23583925 23584135 + 7.89 0.000 Intergenic Intergenic -542185 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr1-12199 chr1 202196059 202196269 + 7.89 0.000 intron (NM_001017403, intron 1 of 17) intron (NM_001017403, intron 1 of 17) 2174 NM_001017403 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr10-1704 chr10 46106327 46106537 + 7.89 0.000 Intergenic CpG -3063 NR_126580 653268 Hs.447454 NM_001077685 AGAP7P AGAP-7|AGAP7|CTGLF4|bA109G10.1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene pseudo chr19-3748 chr19 49468350 49468560 + 7.89 0.000 exon (NM_153329, exon 15 of 17) exon (NM_153329, exon 15 of 17) -5760 NM_001278637 2323 Hs.428 NM_001459 ENSG00000090554 FLT3LG FL|FLG3L|FLT3L fms related tyrosine kinase 3 ligand protein-coding chr8-1735 chr8 15985535 15985745 + 7.89 0.000 Intergenic AluSg|SINE|Alu 200632 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr5-8903 chr5 156734683 156734893 + 7.89 0.000 intron (NM_001128209, intron 6 of 7) L1PA13|LINE|L1 -115507 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr11-7292 chr11 44761614 44761824 + 7.89 0.000 intron (NM_130783, intron 1 of 9) intron (NM_130783, intron 1 of 9) 34757 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr16-3162 chr16 79363910 79364120 + 7.89 0.000 Intergenic Intergenic 236722 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr1-13750 chr1 16176182 16176392 + 7.89 0.000 Intergenic Intergenic -20218 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr7-2669 chr7 6419367 6419577 + 7.89 0.000 intron (NM_001142936, intron 7 of 12) intron (NM_001142936, intron 7 of 12) 28482 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr8-4267 chr8 93904458 93904668 + 7.89 0.000 Intergenic Intergenic 11556 NR_039602 100616169 NR_039602 ENSG00000284288 MIR378D2 mir-378d-2 microRNA 378d-2 ncRNA chr3-11077 chr3 184867666 184867876 + 7.89 0.000 intron (NM_001009921, intron 16 of 46) AluSz6|SINE|Alu 55264 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr8-3561 chr8 127886982 127887192 + 7.89 0.000 intron (NR_003367, intron 1 of 8) L1MEb|LINE|L1 61636 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr16-2251 chr16 774362 774572 + 7.89 0.000 Intergenic Intergenic 4284 NR_030384 724032 NR_030384 ENSG00000207579 MIR662 MIRN662|hsa-mir-662 microRNA 662 ncRNA chr3-8963 chr3 15174350 15174560 + 7.89 0.000 intron (NR_027927, intron 3 of 4) MIRb|SINE|MIR 31504 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen type VI alpha 4 pseudogene 1 pseudo chr6-6854 chr6 8847822 8848032 + 7.89 0.000 Intergenic Intergenic 195718 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr1-16318 chr1 217015219 217015429 + 7.89 0.000 intron (NM_001243509, intron 1 of 8) intron (NM_001243509, intron 1 of 8) 61668 NM_001243509 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr10-7663 chr10 26941685 26941895 + 7.89 0.000 non-coding (NR_026795, exon 1 of 5) non-coding (NR_026795, exon 1 of 5) 211 NR_026795 387644 Hs.529965 NR_026795 ENSG00000283709 FAM238C C10orf51|LINC00202|LINC00202-1|NCRNA00202|bB27G4.1 family with sequence similarity 238 member C ncRNA chr16-6132 chr16 19903117 19903327 + 7.89 0.000 Intergenic AluSz|SINE|Alu -17588 NM_001304771 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chr1-14396 chr1 44212434 44212644 + 7.89 0.000 promoter-TSS (NM_001034024) promoter-TSS (NM_001034024) -932 NM_019100 55929 Hs.8008 NM_019100 ENSG00000178028 DMAP1 DNMAP1|DNMTAP1|EAF2|MEAF2|SWC4 DNA methyltransferase 1 associated protein 1 protein-coding chr15-1891 chr15 72338943 72339153 + 7.89 0.000 Intergenic L2|LINE|L2 -18891 NM_052840 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr19-5108 chr19 56159898 56160108 + 7.89 0.000 exon (NM_001253792, exon 5 of 5) exon (NM_001253792, exon 5 of 5) -16005 NM_033106 85569 Hs.283915 NM_033106 ENSG00000197487 GALP - galanin like peptide protein-coding chr12-3632 chr12 89970940 89971150 + 7.89 0.000 Intergenic Intergenic 23352 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA chr18-1967 chr18 37879137 37879347 + 7.89 0.000 Intergenic HERVL-int|LTR|ERVL 222107 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr11-4117 chr11 36577772 36577982 + 7.89 0.000 3' UTR (NM_000448, exon 2 of 2) 3' UTR (NM_000448, exon 2 of 2) 9864 NM_000448 5896 Hs.73958 NM_000448 ENSG00000166349 RAG1 RAG-1|RNF74 recombination activating 1 protein-coding chr7-4379 chr7 75934507 75934717 + 7.89 0.000 intron (NM_001367562, intron 2 of 16) MST-int|LTR|ERVL-MaLR -9171 NR_002955 677801 Hs.689708 NR_002955 ENSG00000201643 SNORA14A ACA14a small nucleolar RNA, H/ACA box 14A snoRNA chr1-9671 chr1 48819669 48819879 + 7.89 0.000 intron (NR_136623, intron 5 of 12) intron (NR_136623, intron 5 of 12) -42805 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr19-3319 chr19 5207755 5207965 + 7.89 0.000 intron (NM_002850, intron 37 of 37) MIRc|SINE|MIR 132952 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr21-425 chr21 29196274 29196484 + 7.89 0.000 intron (NR_027072, intron 1 of 1) intron (NR_027072, intron 1 of 1) 2885 NR_027072 193629 Hs.720711 NM_138968 ENSG00000215533 LINC00189 C21orf109|NCRNA00189 long intergenic non-protein coding RNA 189 ncRNA chr6-5985 chr6 91860812 91861022 + 7.89 0.000 Intergenic LTR33A|LTR|ERVL -170489 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr10-4381 chr10 44628839 44629049 + 7.89 0.000 Intergenic Intergenic -243847 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr3-4090 chr3 103793508 103793718 + 7.89 0.000 Intergenic L1MEg|LINE|L1 -269497 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr20-1252 chr20 37879051 37879261 + 7.89 0.000 Intergenic Intergenic -23971 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr22-2397 chr22 12623315 12623525 + 7.89 0.000 Intergenic Intergenic 726014 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr11-5986 chr11 20013842 20014052 + 7.89 0.000 intron (NM_182964, intron 11 of 37) MIR3|SINE|MIR -8609 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr6-7798 chr6 98203543 98203753 + 7.89 0.000 Intergenic Intergenic 179117 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr12-2600 chr12 121244283 121244493 + 7.89 0.000 intron (NM_172215, intron 15 of 15) intron (NM_172215, intron 15 of 15) 30197 NM_001270486 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr3-4573 chr3 175002719 175002929 + 7.89 0.000 intron (NM_207015, intron 1 of 13) Tigger4|DNA|TcMar-Tigger 112418 NR_046390 100862679 Hs.148810 NR_046390 ENSG00000230292 NAALADL2-AS3 - NAALADL2 antisense RNA 3 ncRNA chr5-7028 chr5 159518511 159518721 + 7.89 0.000 Intergenic Intergenic -52340 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr2-6066 chr2 145023063 145023273 + 7.89 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 355201 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr5-6368 chr5 139065503 139065713 + 7.89 0.000 intron (NM_022464, intron 3 of 9) intron (NM_022464, intron 3 of 9) 132760 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr9-3117 chr9 77134139 77134349 + 7.89 0.000 Intergenic MSTC|LTR|ERVL-MaLR -43201 NM_001018038 23230 Hs.459790 NM_015186 ENSG00000197969 VPS13A CHAC|CHOREIN vacuolar protein sorting 13 homolog A protein-coding chr8-3163 chr8 92102886 92103096 + 7.89 0.000 5' UTR (NM_175634, exon 1 of 12) 5' UTR (NM_175634, exon 1 of 12) 235 NM_001198633 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr13-3592 chr13 28041404 28041614 + 7.89 0.000 intron (NM_004119, intron 9 of 23) intron (NM_004119, intron 9 of 23) -52872 NM_001105577 646625 Hs.705356 NM_001105577 ENSG00000183463 URAD PRHOXNB ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase protein-coding chr15-2833 chr15 40305136 40305346 + 7.89 0.000 intron (NM_001284298, intron 1 of 30) L1PA8|LINE|L1 2694 NM_001284298 5330 Hs.355888 NM_004573 ENSG00000137841 PLCB2 PLC-beta-2 phospholipase C beta 2 protein-coding chr21-1426 chr21 18641987 18642197 + 7.89 0.000 intron (NR_109925, intron 2 of 3) MER47B|DNA|TcMar-Tigger 44072 NR_036166 100422920 NR_036166 ENSG00000265841 MIR548X - microRNA 548x ncRNA chr2-10591 chr2 241753994 241754204 + 7.89 0.000 intron (NM_152783, intron 8 of 9) L2b|LINE|L2 19469 NR_109778 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr18-1772 chr18 10514236 10514446 + 7.89 0.000 Intergenic L2b|LINE|L2 -11686 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr17-6262 chr17 33454279 33454489 + 7.89 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 79376 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr13-1721 chr13 96992936 96993146 + 7.89 0.000 intron (NM_001346197, intron 1 of 3) intron (NM_001346197, intron 1 of 3) 1435 NM_080818 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding chr7-8341 chr7 43042873 43043083 + 7.89 0.000 Intergenic Intergenic -69669 NM_015052 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr11-8994 chr11 23113750 23113960 + 7.89 0.000 Intergenic Intergenic -253381 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding chr2-10426 chr2 199670676 199670886 + 7.89 0.000 Intergenic Intergenic 62713 NR_110270 101927641 Hs.549598 NR_110270 ENSG00000238217 LINC01877 - long intergenic non-protein coding RNA 1877 ncRNA chr15-4351 chr15 40841813 40842023 + 7.89 0.000 intron (NR_146467, intron 1 of 1) MIR|SINE|MIR -2130 NM_003710 6692 Hs.233950 NM_003710 ENSG00000166145 SPINT1 HAI|HAI1|MANSC2 serine peptidase inhibitor, Kunitz type 1 protein-coding chrX-3197 chrX 45759095 45759305 + 7.89 0.000 Intergenic Intergenic -12076 NR_029636 407007 NR_029636 ENSG00000207725 MIR222 MIRN222|miRNA222|mir-222 microRNA 222 ncRNA chr12-8383 chr12 132728611 132728821 + 7.89 0.000 intron (NM_015114, intron 11 of 12) intron (NM_015114, intron 11 of 12) 17874 NM_138575 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr19-6090 chr19 3292133 3292343 + 7.89 0.000 intron (NR_033342, intron 11 of 12) AluSq2|SINE|Alu 66960 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr3-10031 chr3 103415442 103415652 + 7.89 0.000 Intergenic LTR33A_|LTR|ERVL 108569 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr15-3357 chr15 83642497 83642707 + 7.89 0.000 Intergenic L1MA8|LINE|L1 -11521 NM_001301110 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr6-8380 chr6 149884460 149884670 + 7.89 0.000 intron (NM_001243328, intron 4 of 4) intron (NM_001243328, intron 4 of 4) -5538 NR_045127 100652739 Hs.642734 NR_045126 ENSG00000223701 RAET1E-AS1 RAET1G-AS1 RAET1E antisense RNA 1 ncRNA chr19-6669 chr19 34082891 34083101 + 7.89 0.000 Intergenic Intergenic -89508 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr11-5087 chr11 116632178 116632388 + 7.89 0.000 Intergenic LTR16B|LTR|ERVL -7139 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr1-7170 chr1 208005012 208005222 + 7.89 0.000 Intergenic Intergenic -93992 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr13-844 chr13 86199667 86199877 + 7.89 0.000 Intergenic AluSg|SINE|Alu -400353 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr7-9501 chr7 137903615 137903825 + 7.89 0.000 intron (NM_001318246, intron 7 of 11) intron (NM_001318246, intron 7 of 11) 29268 NM_001318246 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr10-2942 chr10 28548891 28549101 + 7.89 0.000 intron (NM_100486, intron 3 of 12) AluJb|SINE|Alu 15878 NM_100486 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr12-7888 chr12 106657697 106657907 + 7.89 0.000 intron (NM_001206691, intron 4 of 17) L2a|LINE|L2 26898 NR_038912 100505978 Hs.662583 NR_038912 ENSG00000257711 LOC100505978 - uncharacterized LOC100505978 ncRNA chr8-7433 chr8 140605594 140605804 + 7.89 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 29934 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chrX-4071 chrX 20950970 20951180 + 7.89 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -423343 NM_001330770 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr6-4555 chr6 41469268 41469478 + 7.89 0.000 Intergenic Intergenic -33071 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr9-4925 chr9 12698373 12698583 + 7.89 0.000 exon (NM_000550, exon 4 of 8) exon (NM_000550, exon 4 of 8) 5093 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr4-6957 chr4 19448669 19448879 + 7.89 0.000 Intergenic Intergenic -803131 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr6-3348 chr6 25714709 25714919 + 7.89 0.000 Intergenic Intergenic 11748 NM_170745 221613 Hs.406739 NM_170745 ENSG00000164508 HIST1H2AA H2AA|H2AFR|TH2A|bA317E16.2 histone cluster 1 H2A family member a protein-coding chr3-8260 chr3 50958399 50958609 + 7.89 0.000 intron (NM_004947, intron 5 of 52) MIRc|SINE|MIR 283424 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr2-3578 chr2 46855432 46855642 + 7.89 0.000 intron (NR_024452, intron 1 of 2) intron (NR_024452, intron 1 of 2) 27673 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA chr17-2654 chr17 21070127 21070337 + 7.89 0.000 Intergenic MIR3|SINE|MIR -5324 NR_110896 101060544 Hs.585812 NR_110895 ENSG00000236819 LINC01563 HP08942 long intergenic non-protein coding RNA 1563 ncRNA chr20-2082 chr20 18791567 18791777 + 7.89 0.000 intron (NR_026883, intron 2 of 3) intron (NR_026883, intron 2 of 3) 2310 NR_026884 29075 Hs.584899 NM_014162 LINC00652 HSPC072 long intergenic non-protein coding RNA 652 ncRNA chrX-1213 chrX 72269893 72270103 + 7.89 0.000 Intergenic AluJb|SINE|Alu 7250 NM_001007 6191 Hs.118076 NM_001007 ENSG00000198034 RPS4X CCG2|DXS306|RPS4|S4|SCAR|SCR10 ribosomal protein S4 X-linked protein-coding chr21-563 chr21 44463027 44463237 + 7.89 0.000 TTS (NM_030891) TTS (NM_030891) 7622 NM_030891 81543 Hs.326579 NM_030891 ENSG00000160233 LRRC3 C21orf102|C21orf30|LRRC3DN leucine rich repeat containing 3 protein-coding chr10-7071 chr10 88149957 88150167 + 7.89 0.000 Intergenic Intergenic 286437 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr1-15244 chr1 112334189 112334399 + 7.89 0.000 Intergenic Intergenic -61920 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr2-13230 chr2 124532229 124532439 + 7.89 0.000 intron (NM_130773, intron 10 of 23) intron (NM_130773, intron 10 of 23) 507047 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr10-8766 chr10 104452722 104452932 + 7.89 0.000 intron (NM_001008723, intron 17 of 17) intron (NM_001008723, intron 17 of 17) 27448 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr14-5115 chr14 89230136 89230346 + 7.89 0.000 intron (NM_001085471, intron 4 of 6) L2a|LINE|L2 186992 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr12-8025 chr12 113444019 113444229 + 7.89 0.000 Intergenic AluSz6|SINE|Alu 21734 NM_138432 113675 Hs.337594 NM_138432 ENSG00000139410 SDSL SDH 2|SDS-RS1|TDH|cSDH serine dehydratase like protein-coding chr13-3611 chr13 29526641 29526851 + 7.89 0.000 intron (NM_003045, intron 5 of 12) intron (NM_003045, intron 5 of 12) -38996 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr1-8589 chr1 180250204 180250414 + 7.89 0.000 intron (NM_033343, intron 2 of 5) intron (NM_033343, intron 2 of 5) 20045 NM_033343 89884 Hs.658487 NM_033343 ENSG00000121454 LHX4 CPHD4 LIM homeobox 4 protein-coding chr2-6107 chr2 201056799 201057009 + 7.89 0.000 intron (NM_001321629, intron 1 of 12) MER20|DNA|hAT-Charlie 14767 NM_001321621 285172 Hs.24701 NM_173822 ENSG00000155744 FAM126B HYCC2 family with sequence similarity 126 member B protein-coding chr4-7565 chr4 78679896 78680106 + 7.89 0.000 intron (NR_038303, intron 4 of 4) intron (NR_038303, intron 4 of 4) 34007 NR_038303 100505702 Hs.235795 NR_038303 LINC01094 - long intergenic non-protein coding RNA 1094 ncRNA chr4-2515 chr4 37891665 37891875 + 7.89 0.000 intron (NM_001253912, intron 1 of 20) intron (NM_001253912, intron 1 of 20) 686 NM_015173 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr12-5518 chr12 131623454 131623664 + 7.89 0.000 Intergenic Intergenic 24562 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr12-6987 chr12 30145577 30145787 + 7.89 0.000 Intergenic Intergenic -360923 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr4-3368 chr4 8084286 8084496 + 7.89 0.000 intron (NM_001130084, intron 4 of 19) intron (NM_001130084, intron 4 of 19) -12403 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr20-2541 chr20 35819273 35819483 + 7.89 0.000 intron (NM_016436, intron 2 of 17) L3|LINE|CR1 47363 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding chr11-10586 chr11 123023287 123023497 + 7.89 0.000 Intergenic Intergenic 5826 NR_027288 341056 Hs.620309 NR_027288 LOC341056 - SUMO1 activating enzyme subunit 1 pseudogene pseudo chr18-2655 chr18 48106914 48107124 + 7.89 0.000 intron (NM_001371291, intron 4 of 6) intron (NM_001371291, intron 4 of 6) 30129 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr12-4204 chr12 99661587 99661797 + 7.89 0.000 intron (NM_152788, intron 8 of 25) MLT1J|LTR|ERVL-MaLR 13939 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr6-5009 chr6 109120203 109120413 + 7.89 0.000 intron (NM_001083535, intron 3 of 12) intron (NM_001083535, intron 3 of 12) -8996 NM_173830 285753 Hs.632616 NM_173830 ENSG00000183137 CEP57L1 C6orf182|bA487F23.2|cep57R centrosomal protein 57 like 1 protein-coding chr6-2281 chr6 79032313 79032523 + 7.89 0.000 intron (NM_017934, intron 7 of 39) Tigger1|DNA|TcMar-Tigger 45836 NM_017934 55023 Hs.511817 NM_017934 ENSG00000146247 PHIP BRWD2|DCAF14|DIDOD|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding chr4-8063 chr4 121923098 121923308 + 7.89 0.000 intron (NM_001130698, intron 3 of 11) intron (NM_001130698, intron 3 of 11) 9910 NM_003305 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr9-5326 chr9 87610803 87611013 + 7.89 0.000 intron (NM_004938, intron 3 of 25) intron (NM_004938, intron 3 of 25) 57454 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr1-7854 chr1 87712653 87712863 + 7.89 0.000 Intergenic Intergenic -341103 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr14-2476 chr14 95296479 95296689 + 7.89 0.000 intron (NM_024734, intron 1 of 12) MLT1J|LTR|ERVL-MaLR 23324 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr16-6204 chr16 27802106 27802316 + 7.89 0.000 intron (NM_001109763, intron 6 of 6) L2c|LINE|L2 -83182 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr10-4075 chr10 44651215 44651425 + 7.89 0.000 Intergenic Intergenic -259996 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr20-3781 chr20 21257322 21257532 + 7.89 0.000 Intergenic L1M5|LINE|L1 -39138 NR_109956 101929591 Hs.656066 NR_109956 ENSG00000232712 KIZ-AS1 - KIZ antisense RNA 1 ncRNA chr3-4908 chr3 188217038 188217248 + 7.89 0.000 intron (NM_005578, intron 1 of 10) L2b|LINE|L2 4210 NM_005578 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chrX-4554 chrX 69219883 69220093 + 7.89 0.000 Intergenic Charlie7a|DNA|hAT-Charlie 40431 NR_103715 100996279 NR_103715 ENSG00000215162 LINC00269 CXorf62|NCRNA00269 long intergenic non-protein coding RNA 269 ncRNA chr16-3155 chr16 75566112 75566322 + 7.89 0.000 promoter-TSS (NM_007285) promoter-TSS (NM_007285) -162 NM_007285 11345 Hs.461379 NM_007285 ENSG00000034713 GABARAPL2 ATG8|ATG8C|GATE-16|GATE16|GEF-2|GEF2 GABA type A receptor associated protein like 2 protein-coding chr9-3599 chr9 83656891 83657101 + 7.89 0.000 Intergenic L2a|LINE|L2 33853 NR_046421 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding chr2-10301 chr2 136441666 136441876 + 7.89 0.000 Intergenic L2c|LINE|L2 -323616 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr6-5368 chr6 150610928 150611138 + 7.89 0.000 intron (NM_001329799, intron 1 of 15) intron (NM_001329799, intron 1 of 15) 11148 NM_001329804 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr20-3447 chr20 50284863 50285073 + 7.89 0.000 Intergenic Intergenic -7752 NR_034124 284751 Hs.282325 NM_001025463 ENSG00000203999 LINC01270 - long intergenic non-protein coding RNA 1270 ncRNA chr14-4597 chr14 51554356 51554566 + 7.89 0.000 intron (NR_047477, intron 2 of 3) L1MC3|LINE|L1 45491 NR_047477 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr12-6248 chr12 41207829 41208039 + 7.89 0.000 intron (NM_001164595, intron 3 of 9) intron (NM_001164595, intron 3 of 9) 19614 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr12-5689 chr12 107248268 107248478 + 7.89 0.000 Intergenic L2-3_Crp|LINE|L2 -70061 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr2-5606 chr2 180913703 180913913 + 7.89 0.000 intron (NR_104323, intron 5 of 5) L1PA13|LINE|L1 -66577 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr8-4297 chr8 97232337 97232547 + 7.89 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) 45486 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr7-3849 chr7 101280339 101280549 + 7.89 0.000 Intergenic AluJb|SINE|Alu -19169 NR_146480 101927721 Hs.148659 NR_146480 ENSG00000232301 LNCPRESS1 - lncRNA p53 regulated and ESC associated 1 ncRNA chr22-1242 chr22 46814286 46814496 + 7.89 0.000 intron (NM_001284305, intron 4 of 12) MIRb|SINE|MIR 40464 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr13-2001 chr13 32235510 32235720 + 7.89 0.000 intron (NM_023037, intron 42 of 60) AluSz|SINE|Alu 76339 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr1-15895 chr1 183597854 183598064 + 7.89 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -7045 NM_001127651 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr6-3359 chr6 34696174 34696384 + 7.89 0.000 promoter-TSS (NR_134626) promoter-TSS (NR_134626) 125 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr12-3847 chr12 98962366 98962576 + 7.89 0.000 intron (NM_152788, intron 17 of 25) L1MA3|LINE|L1 -67180 NM_001352208 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr3-9363 chr3 46913782 46913992 + 7.89 0.000 Intergenic Intergenic 31638 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr19-2991 chr19 39568651 39568861 + 7.89 0.000 Intergenic Intergenic -28595 NM_153232 163126 Hs.18949 NM_153232 ENSG00000176396 EID2 CRI2|EID-2 EP300 interacting inhibitor of differentiation 2 protein-coding chr13-2022 chr13 41614007 41614217 + 7.89 0.000 intron (NM_015058, intron 38 of 44) intron (NM_015058, intron 38 of 44) -45717 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr22-2492 chr22 22098720 22098930 + 7.89 0.000 Intergenic Intergenic -54891 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr10-3983 chr10 124593426 124593636 + 7.89 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) -110497 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr2-10668 chr2 21557510 21557720 + 7.89 0.000 Intergenic Intergenic 153037 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr16-5643 chr16 66784452 66784662 + 7.89 0.000 intron (NM_001136505, intron 9 of 18) AluSz|SINE|Alu 17063 NM_001136505 283847 Hs.376505 NM_173616 ENSG00000249961 TERB1 CCDC79 telomere repeat binding bouquet formation protein 1 protein-coding chr18-2372 chr18 61116074 61116284 + 7.89 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -217251 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr5-7323 chr5 16074814 16075024 + 7.89 0.000 intron (NM_001102562, intron 3 of 3) intron (NM_001102562, intron 3 of 3) 104872 NM_001102562 441061 Hs.662216 NM_001102562 ENSG00000183654 MARCH11 MARCH-XI|RNF226 membrane associated ring-CH-type finger 11 protein-coding chr6-1809 chr6 136715925 136716135 + 7.89 0.000 intron (NM_005923, intron 2 of 29) AluSx1|SINE|Alu -68017 NR_134635 101928429 Hs.672896 NR_134635 LOC101928429 - uncharacterized LOC101928429 ncRNA chr15-1484 chr15 39783370 39783580 + 7.89 0.000 promoter-TSS (NM_001324338) promoter-TSS (NM_001324338) 569 NR_135665 105370941 Hs.587843 NR_135665 ENSG00000261136 LOC105370941 - uncharacterized LOC105370941 ncRNA chr16-4548 chr16 65884332 65884542 + 7.89 0.000 Intergenic L2c|LINE|L2 -308137 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr7-8906 chr7 93746446 93746656 + 7.89 0.000 Intergenic Intergenic 29623 NR_039796 100616206 NR_039796 ENSG00000265423 MIR4652 - microRNA 4652 ncRNA chr1-4948 chr1 52102120 52102330 + 7.89 0.000 Intergenic AluJb|SINE|Alu -39864 NM_007324 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr3-5416 chr3 168558941 168559151 + 7.89 0.000 intron (NR_021485, intron 4 of 15) intron (NR_021485, intron 4 of 15) 7192 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr9-4235 chr9 79884508 79884718 + 7.89 0.000 intron (NR_121213, intron 1 of 2) intron (NR_121213, intron 1 of 2) 60083 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr7-7674 chr7 151895914 151896124 + 7.89 0.000 Intergenic Intergenic -18904 NM_016203 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr17-8689 chr17 83183954 83184164 + 7.89 0.000 Intergenic Intergenic -42838 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chrX-4613 chrX 74473236 74473446 + 7.89 0.000 intron (NM_006517, intron 1 of 5) intron (NM_006517, intron 1 of 5) 51848 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr4-8462 chr4 156493935 156494145 + 7.89 0.000 Intergenic Intergenic 477759 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr3-4018 chr3 64996011 64996221 + 7.89 0.000 intron (NR_038264, intron 4 of 5) intron (NR_038264, intron 4 of 5) -308116 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr11-5556 chr11 100161908 100162118 + 7.89 0.000 intron (NM_001243270, intron 12 of 23) intron (NM_001243270, intron 12 of 23) -525275 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr16-4311 chr16 28904389 28904599 + 7.89 0.000 TTS (NM_001286075) TTS (NM_001286075) 20744 NM_024816 79874 Hs.555978 NM_024816 ENSG00000177548 RABEP2 FRA rabaptin, RAB GTPase binding effector protein 2 protein-coding chr6-5539 chr6 168116205 168116415 + 7.89 0.000 Intergenic Intergenic -34753 NR_110312 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr19-3100 chr19 6802862 6803072 + 7.89 0.000 intron (NM_001258206, intron 1 of 25) L1MC1|LINE|L1 30259 NM_001258206 7409 Hs.116237 NM_005428 ENSG00000141968 VAV1 VAV vav guanine nucleotide exchange factor 1 protein-coding chr2-4149 chr2 174032840 174033050 + 7.89 0.000 Intergenic Intergenic 7665 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr5-2793 chr5 208578 208788 + 7.89 0.000 intron (NM_145265, intron 2 of 2) L1MDa|LINE|L1 9470 NM_145265 133957 Hs.294145 NM_145265 ENSG00000164366 CCDC127 - coiled-coil domain containing 127 protein-coding chr1-11370 chr1 39850373 39850583 + 7.89 0.000 intron (NR_132410, intron 1 of 6) FLAM_C|SINE|Alu 33026 NM_017646 54802 Hs.356554 NM_017646 ENSG00000043514 TRIT1 COXPD35|GRO1|IPPT|IPT|IPTase|MOD5|hGRO1 tRNA isopentenyltransferase 1 protein-coding chr20-1886 chr20 49450224 49450434 + 7.89 0.000 intron (NM_004975, intron 1 of 1) intron (NM_004975, intron 1 of 1) 32339 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr10-7562 chr10 16717659 16717869 + 7.89 0.000 intron (NM_152724, intron 6 of 7) intron (NM_152724, intron 6 of 7) 99660 NM_012425 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr8-4439 chr8 111586543 111586753 + 7.89 0.000 Intergenic Intergenic 210009 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr12-8226 chr12 124063588 124063798 + 7.89 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 90478 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr9-6985 chr9 110486553 110486763 + 7.89 0.000 intron (NM_153366, intron 9 of 47) AluSx|SINE|Alu 93083 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr14-4770 chr14 63654405 63654615 + 7.89 0.000 Intergenic Intergenic -12639 NM_080666 112840 Hs.655666 NM_080666 ENSG00000140006 WDR89 C14orf150|MSTP050 WD repeat domain 89 protein-coding chr4-5419 chr4 8443922 8444132 + 7.89 0.000 intron (NM_152544, intron 1 of 10) MIR|SINE|MIR 3230 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr5-2705 chr5 95620456 95620666 + 7.89 0.000 exon (NM_199243, exon 1 of 1) exon (NM_199243, exon 1 of 1) 474 NM_199243 285601 Hs.143315 NM_199243 ENSG00000178015 GPR150 PGR11 G protein-coupled receptor 150 protein-coding chr12-4686 chr12 48578654 48578864 + 7.89 0.000 Intergenic Intergenic -8713 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr5-6275 chr5 104235978 104236188 + 7.89 0.000 Intergenic L2|LINE|L2 -673294 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr4-8280 chr4 141921907 141922117 + 7.89 0.000 Intergenic Intergenic 285429 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr2-7942 chr2 61141315 61141525 + 7.89 0.000 TTS (NR_036496) TTS (NR_036496) 3555 NR_036496 339803 Hs.252433 NR_036496 ENSG00000212978 LOC339803 - uncharacterized LOC339803 ncRNA chr5-8603 chr5 138518958 138519168 + 7.89 0.000 intron (NR_157090, intron 2 of 9) intron (NR_157090, intron 2 of 9) 22648 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr16-6854 chr16 82935155 82935365 + 7.89 0.000 intron (NM_001220490, intron 2 of 12) THE1C|LTR|ERVL-MaLR 55038 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr22-2047 chr22 43274023 43274233 + 7.89 0.000 intron (NM_173050, intron 4 of 21) intron (NM_173050, intron 4 of 21) -1814 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr19-4961 chr19 45306310 45306520 + 7.89 0.000 TTS (NM_001824) TTS (NM_001824) 16460 NM_001824 1158 Hs.334347 NM_001824 ENSG00000104879 CKM CKMM|CPK-M|M-CK creatine kinase, M-type protein-coding chr15-5192 chr15 93934816 93935026 + 7.89 0.000 intron (NR_120320, intron 8 of 8) MIRc|SINE|MIR 34220 NR_120323 101927129 Hs.652658 NR_120322 ENSG00000258785 LINC01580 - long intergenic non-protein coding RNA 1580 ncRNA chr18-1083 chr18 47226843 47227053 + 7.89 0.000 intron (NM_001278063, intron 6 of 8) intron (NM_001278063, intron 6 of 8) 24712 NM_001278063 652991 Hs.585834 NM_001037802 ENSG00000215474 SKOR2 CH18515|CORL2|FUSSEL18 SKI family transcriptional corepressor 2 protein-coding chr21-1711 chr21 31916905 31917115 + 7.89 0.000 intron (NM_014586, intron 1 of 10) intron (NM_014586, intron 1 of 10) 43990 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr1-14677 chr1 61132081 61132291 + 7.89 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 49625 NM_005595 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr14-3441 chr14 99277567 99277777 + 7.89 0.000 Intergenic Intergenic -5475 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chrX-738 chrX 9614018 9614228 + 7.89 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 149065 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr8-5079 chr8 40970165 40970375 + 7.89 0.000 Intergenic L1ME5|LINE|L1 -72444 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr2-14447 chr2 223034697 223034907 + 7.89 0.000 Intergenic L1PA16|LINE|L1 -17128 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr3-4084 chr3 101077536 101077746 + 7.89 0.000 Intergenic Intergenic -84151 NM_001349330 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr1-6857 chr1 109560396 109560606 + 7.89 0.000 intron (NM_006496, intron 1 of 8) AluJb|SINE|Alu 11886 NM_006496 2773 Hs.73799 NM_006496 ENSG00000065135 GNAI3 87U6|ARCND1 G protein subunit alpha i3 protein-coding chr1-10031 chr1 88303087 88303297 + 7.89 0.000 Intergenic Intergenic -380952 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1-14753 chr1 67723098 67723308 + 7.89 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 38002 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr7-6108 chr7 120677197 120677407 + 7.89 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 180842 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr1-10730 chr1 196822537 196822747 + 7.89 0.000 intron (NM_002113, intron 1 of 5) Tigger3b|DNA|TcMar-Tigger 2911 NM_002113 3078 Hs.575869 NM_002113 ENSG00000244414 CFHR1 CFHL|CFHL1|CFHL1P|CFHR1P|FHR1|H36-1|H36-2|HFL1|HFL2 complement factor H related 1 protein-coding chr10-6849 chr10 25930700 25930910 + 7.89 0.000 intron (NR_120650, intron 2 of 3) intron (NR_120650, intron 2 of 3) 2905 NR_120650 101929073 Hs.409816 NR_120650 ENSG00000226304 LOC101929073 - uncharacterized LOC101929073 ncRNA chr2-9228 chr2 218357752 218357962 + 7.89 0.000 intron (NM_001320865, intron 3 of 9) intron (NM_001320865, intron 3 of 9) 109 NR_125777 103689911 NR_125777 CATIP-AS2 - CATIP antisense RNA 2 ncRNA chr18-2194 chr18 61129983 61130193 + 7.89 0.000 Intergenic L1PA5|LINE|L1 -203342 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr11-10314 chr11 108647642 108647852 + 7.89 0.000 Intergenic L1M1|LINE|L1 -17322 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr17-5701 chr17 54362665 54362875 + 7.89 0.000 Intergenic Intergenic -537921 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr5-5889 chr5 18048645 18048855 + 7.89 0.000 Intergenic Intergenic 241476 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr2-12577 chr2 70090033 70090243 + 7.89 0.000 TTS (NM_006196) TTS (NM_006196) 2661 NM_006196 5093 Hs.2853 NM_006196 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding chr15-1277 chr15 94322197 94322407 + 7.89 0.000 intron (NM_018349, intron 3 of 21) intron (NM_018349, intron 3 of 21) 24101 NM_001159643 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr2-5478 chr2 133324035 133324245 + 7.89 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 57945 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr1-6806 chr1 89812955 89813165 + 7.89 0.000 Intergenic Intergenic -7972 NM_001134479 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 VRAC subunit D protein-coding chr1-7433 chr1 45545129 45545339 + 7.89 0.000 Intergenic Intergenic -5549 NM_001202413 10327 Hs.474584 NM_006066 ENSG00000117448 AKR1A1 ALDR1|ALR|ARM|DD3|HEL-S-6 aldo-keto reductase family 1 member A1 protein-coding chr5-2877 chr5 92134195 92134405 + 7.89 0.000 Intergenic L1PA13|LINE|L1 -750983 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr3-7665 chr3 37623364 37623574 + 7.89 0.000 intron (NM_002207, intron 15 of 27) L1MEg|LINE|L1 171328 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chrX-3493 chrX 39166605 39166815 + 7.89 0.000 Intergenic Intergenic 160652 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr12-4150 chr12 81387281 81387491 + 7.89 0.000 intron (NM_001282536, intron 5 of 29) Tigger9b|DNA|TcMar-Tigger -17972 NM_001220480 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chrX-4411 chrX 53263577 53263787 + 7.89 0.000 intron (NM_001111125, intron 2 of 14) intron (NM_001111125, intron 2 of 14) 17902 NM_001243197 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr13-3833 chr13 48412883 48413093 + 7.89 0.000 5' UTR (NM_001162498, exon 1 of 1) 5' UTR (NM_001162498, exon 1 of 1) 125 NM_001162498 10161 Hs.123464 NM_005767 ENSG00000139679 LPAR6 ARWH1|HYPT8|LAH3|P2RY5|P2Y5 lysophosphatidic acid receptor 6 protein-coding chr4-8760 chr4 187141644 187141854 + 7.89 0.000 Intergenic Intergenic -60237 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr9-3235 chr9 137118787 137118997 + 7.89 0.000 Intergenic LTR13|LTR|ERVK -4159 NM_013379 29952 Hs.37916 NM_013379 ENSG00000176978 DPP7 DPP2|DPPII|QPP dipeptidyl peptidase 7 protein-coding chr16-2380 chr16 66690330 66690540 + 7.89 0.000 intron (NM_181521, intron 1 of 3) intron (NM_181521, intron 1 of 3) 6308 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr8-3348 chr8 41262071 41262281 + 7.89 0.000 3' UTR (NM_003012, exon 3 of 3) 3' UTR (NM_003012, exon 3 of 3) 8967 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr2-14094 chr2 200081964 200082174 + 7.89 0.000 Intergenic Intergenic -126578 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr8-6167 chr8 32509786 32509996 + 7.89 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -38319 NM_013958 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr6-6773 chr6 3681913 3682123 + 7.89 0.000 Intergenic L1MB7|LINE|L1 69994 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr17-7484 chr17 16043427 16043637 + 7.89 0.000 intron (NM_001190440, intron 41 of 44) intron (NM_001190440, intron 41 of 44) 43708 NM_001271420 54902 Hs.462316 NM_017775 ENSG00000011295 TTC19 2010204O13Rik|MC3DN2 tetratricopeptide repeat domain 19 protein-coding chr3-10266 chr3 124209550 124209760 + 7.89 0.000 intron (NM_001024660, intron 1 of 59) L3|LINE|CR1 76726 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr20-3632 chr20 8454398 8454608 + 7.89 0.000 intron (NM_182734, intron 3 of 32) L2a|LINE|L2 205799 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr10-7722 chr10 31121283 31121493 + 7.89 0.000 Intergenic Intergenic -66495 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr5-3107 chr5 53042879 53043089 + 7.89 0.000 intron (NR_073106, intron 3 of 29) L2a|LINE|L2 53632 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr16-5021 chr16 49480465 49480675 + 7.89 0.000 Intergenic AluSx|SINE|Alu 38015 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr13-1640 chr13 59406660 59406870 + 7.89 0.000 Intergenic Intergenic -605953 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr1-8166 chr1 17479881 17480091 + 7.89 0.000 Intergenic AluJb|SINE|Alu -40309 NM_018715 55920 Hs.380857 NM_018715 ENSG00000179051 RCC2 TD-60 regulator of chromosome condensation 2 protein-coding chr17-7410 chr17 9136598 9136808 + 7.89 0.000 intron (NM_004822, intron 2 of 6) intron (NM_004822, intron 2 of 6) 42415 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr3-9368 chr3 46994311 46994521 + 7.89 0.000 intron (NM_001365116, intron 10 of 52) intron (NM_001365116, intron 10 of 52) 6426 NM_001365116 23218 Hs.437043 NM_015175 ENSG00000160796 NBEAL2 BDPLT4|GPS neurobeachin like 2 protein-coding chr5-5028 chr5 85107288 85107498 + 7.89 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -722513 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr13-1654 chr13 69344900 69345110 + 7.89 0.000 Intergenic L1M1|LINE|L1 122659 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr9-6560 chr9 120131274 120131484 + 7.89 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 113671 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr3-10695 chr3 151931197 151931407 + 7.89 0.000 Intergenic Intergenic -3127 NR_110202 101928142 Hs.680207 NR_110202 AADACL2-AS1 - AADACL2 antisense RNA 1 ncRNA chr3-8841 chr3 9137899 9138109 + 7.89 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -54489 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr4-3791 chr4 103380161 103380371 + 7.89 0.000 Intergenic L1M1|LINE|L1 -44776 NR_125925 101929448 Hs.570839 NR_125925 ENSG00000248740 LINC02428 - long intergenic non-protein coding RNA 2428 ncRNA chr8-7380 chr8 138664010 138664220 + 7.89 0.000 intron (NM_152888, intron 41 of 64) intron (NM_152888, intron 41 of 64) -166385 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr1-7963 chr1 191298166 191298376 + 7.89 0.000 Intergenic L1M2|LINE|L1 -69773 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr5-5370 chr5 133340009 133340219 + 7.89 0.000 intron (NM_015082, intron 4 of 15) MIRc|SINE|MIR 87592 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr2-11234 chr2 166130621 166130831 + 7.89 0.000 intron (NR_110260, intron 2 of 11) intron (NR_110260, intron 2 of 11) -2706 NM_001353961 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr3-5478 chr3 187619551 187619761 + 7.89 0.000 Intergenic L2c|LINE|L2 50738 NM_001048 6750 Hs.12409 NM_001048 ENSG00000157005 SST SMST somatostatin protein-coding chr17-6783 chr17 3852877 3853087 + 7.89 0.000 Intergenic L2b|LINE|L2 -6736 NM_001114118 55421 Hs.120963 NM_018553 ENSG00000074356 NCBP3 C17orf85|ELG|HSA277841 nuclear cap binding subunit 3 protein-coding chr6-6202 chr6 14385685 14385895 + 7.89 0.000 Intergenic MER34A|LTR|ERV1 -100336 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr1-11645 chr1 858200 858410 + 7.89 0.000 non-coding (NR_047519, exon 6 of 6) non-coding (NR_047519, exon 6 of 6) 18497 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr1-9778 chr1 56548122 56548332 + 7.89 0.000 intron (NM_003713, intron 1 of 5) intron (NM_003713, intron 1 of 5) 31336 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chrX-5407 chrX 152936553 152936763 + 7.89 0.000 intron (NM_001178107, intron 14 of 22) intron (NM_001178107, intron 14 of 22) -5013 NM_001178115 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr16-6137 chr16 20379559 20379769 + 7.89 0.000 intron (NM_174924, intron 3 of 11) L1ME3A|LINE|L1 25073 NM_174924 204474 Hs.376025 NM_174924 ENSG00000169340 PDILT PDIA7 protein disulfide isomerase like, testis expressed protein-coding chr2-4935 chr2 171550924 171551134 + 7.89 0.000 intron (NM_001256909, intron 2 of 3) AluJb|SINE|Alu 28555 NM_001127383 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr1-8338 chr1 54024376 54024586 + 7.89 0.000 Intergenic Intergenic -6295 NM_001276394 388633 Hs.439583 NM_001010978 ENSG00000203985 LDLRAD1 - low density lipoprotein receptor class A domain containing 1 protein-coding chr7-5406 chr7 34489376 34489586 + 7.89 0.000 intron (NR_033665, intron 2 of 3) intron (NR_033665, intron 2 of 3) -168737 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr3-7110 chr3 182609396 182609606 + 7.89 0.000 Intergenic Intergenic -102377 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr11-5850 chr11 9302635 9302845 + 7.89 0.000 intron (NR_028491, intron 1 of 7) MER5A1|DNA|hAT-Charlie 11853 NM_001165030 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B - transmembrane protein 41B protein-coding chr11-9132 chr11 33841144 33841354 + 7.89 0.000 Intergenic Intergenic 28629 NM_001142316 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr11-9084 chr11 30911113 30911323 + 7.89 0.000 intron (NM_001367979, intron 28 of 38) intron (NM_001367979, intron 28 of 38) 81468 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr12-4226 chr12 106577276 106577486 + 7.89 0.000 intron (NR_040246, intron 1 of 3) MER5A|DNA|hAT-Charlie -5526 NM_213594 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr3-3242 chr3 42608610 42608820 + 7.89 0.000 intron (NM_001349126, intron 2 of 18) MER21C|LTR|ERVL -7637 NM_001201572 9117 Hs.445892 NM_004206 ENSG00000093183 SEC22C SEC22L3 SEC22 homolog C, vesicle trafficking protein protein-coding chr9-4190 chr9 33610900 33611110 + 7.89 0.000 Intergenic Intergenic -13220 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr7-3765 chr7 79307195 79307405 + 7.89 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) -145657 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr3-6529 chr3 116886201 116886411 + 7.89 0.000 Intergenic Intergenic -35125 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr13-2858 chr13 110274353 110274563 + 7.89 0.000 intron (NM_001845, intron 1 of 51) MIRb|SINE|MIR 32699 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr2-11351 chr2 204520266 204520476 + 7.89 0.000 Intergenic Intergenic -25104 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding KI270728.1-1 KI270728.1 1288503 1288713 + 7.89 0.000 NA NA NA NA chr10-3350 chr10 14296214 14296424 + 7.89 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 34565 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr9-6488 chr9 95586513 95586723 + 7.89 0.000 Intergenic Intergenic -69561 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr1-11157 chr1 237151184 237151394 + 7.89 0.000 intron (NM_001035, intron 1 of 104) intron (NM_001035, intron 1 of 104) 109105 NM_001035 6262 Hs.109514 NM_001035 ENSG00000198626 RYR2 ARVC2|ARVD2|RYR-2|RyR|VTSIP ryanodine receptor 2 protein-coding chr2-14319 chr2 217732799 217733009 + 7.89 0.000 intron (NR_026597, intron 1 of 12) LTR33A|LTR|ERVL 23689 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chrX-1988 chrX 12769153 12769363 + 7.89 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -22097 NM_002765 5634 Hs.654581 NM_002765 ENSG00000101911 PRPS2 PRSII phosphoribosyl pyrophosphate synthetase 2 protein-coding chr2-5868 chr2 239942628 239942838 + 7.89 0.000 TTS (NR_039949) TTS (NR_039949) 361 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr9-8544 chr9 126670202 126670412 + 7.89 0.000 intron (NM_001174146, intron 2 of 7) (TGTGCA)n|Simple_repeat|Simple_repeat 55864 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr6-6922 chr6 14467716 14467926 + 7.89 0.000 Intergenic Intergenic -182367 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr8-5641 chr8 107505549 107505759 + 7.89 0.000 Intergenic Intergenic -7736 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr2-13130 chr2 117517320 117517530 + 7.89 0.000 Intergenic Intergenic -297266 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr10-4766 chr10 3902910 3903120 + 7.89 0.000 Intergenic Intergenic 69065 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr7-5129 chr7 5174594 5174804 + 7.89 0.000 Intergenic Intergenic -15534 NM_016003 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr22-2349 chr22 43110337 43110547 + 7.89 0.000 promoter-TSS (NM_001197) promoter-TSS (NM_001197) -308 NM_001197 638 Hs.475055 NM_001197 ENSG00000100290 BIK BIP1|BP4|NBK BCL2 interacting killer protein-coding chr12-7342 chr12 55744814 55745024 + 7.89 0.000 intron (NM_005811, intron 1 of 2) intron (NM_005811, intron 1 of 2) 1797 NM_005811 10220 Hs.600883 NM_005811 ENSG00000135414 GDF11 BMP-11|BMP11 growth differentiation factor 11 protein-coding chr1-8847 chr1 3319996 3320206 + 7.89 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -134564 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr1-3726 chr1 224322212 224322422 + 7.89 0.000 intron (NM_206840, intron 1 of 21) AluJr|SINE|Alu 7855 NM_002533 4931 Hs.497867 NM_002533 ENSG00000143748 NVL NVL2 nuclear VCP like protein-coding chr13-3304 chr13 51128745 51128955 + 7.89 0.000 intron (NR_102431, intron 1 of 4) LTR22|LTR|ERVK -17622 NM_001351589 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr15-2557 chr15 50538949 50539159 + 7.89 0.000 intron (NM_203494, intron 4 of 6) intron (NM_203494, intron 4 of 6) 7612 NM_203494 373509 Hs.677758 NM_203494 ENSG00000170236 USP50 - ubiquitin specific peptidase 50 protein-coding chr17-3637 chr17 3741740 3741950 + 7.89 0.000 intron (NM_002208, intron 19 of 30) AluSq2|SINE|Alu 17942 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr11-3485 chr11 96056190 96056400 + 7.89 0.000 intron (NM_032427, intron 2 of 4) intron (NM_032427, intron 2 of 4) -132088 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr17-7742 chr17 34159144 34159354 + 7.89 0.000 Intergenic Intergenic -2443 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr9-7555 chr9 35339045 35339255 + 7.89 0.000 intron (NM_006377, intron 10 of 38) intron (NM_006377, intron 10 of 38) -2746 NM_001371187 chr11-5326 chr11 58361176 58361386 + 7.89 0.000 Intergenic MIRb|SINE|MIR -2212 NM_001005489 219965 NM_001005489 ENSG00000197786 OR5B17 OR11-237|OR5B20P olfactory receptor family 5 subfamily B member 17 protein-coding chr5-8722 chr5 144283817 144284027 + 7.89 0.000 intron (NM_001370487, intron 2 of 2) MLT1K|LTR|ERVL-MaLR 78531 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr10-8113 chr10 69539017 69539227 + 7.89 0.000 Intergenic Intergenic 34300 NM_020999 50674 Hs.532682 NM_020999 ENSG00000122859 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding chr14-1305 chr14 35890136 35890346 + 7.89 0.000 Intergenic AluJo|SINE|Alu 63903 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr10-4488 chr10 80648277 80648487 + 7.89 0.000 Intergenic Intergenic -1415 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr2-10510 chr2 229921268 229921478 + 7.89 0.000 5' UTR (NM_001348329, exon 1 of 42) 5' UTR (NM_001348329, exon 1 of 42) 306 NM_001348334 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr22-3963 chr22 37916167 37916377 + 7.89 0.000 intron (NM_033386, intron 3 of 15) MER83B|LTR|ERV1 9975 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr2-11788 chr2 15468132 15468342 + 7.89 0.000 intron (NR_052013, intron 17 of 50) intron (NR_052013, intron 17 of 50) 93097 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr10-8614 chr10 97593561 97593771 + 7.89 0.000 intron (NM_001134670, intron 1 of 2) intron (NM_001134670, intron 1 of 2) 3945 NM_001009997 414157 Hs.662302 NM_001009997 ENSG00000203942 C10orf62 bA548K23.1 chromosome 10 open reading frame 62 protein-coding chr3-4445 chr3 32017369 32017579 + 7.89 0.000 Intergenic MIR|SINE|MIR -35624 NM_017784 114884 Hs.150122 NM_017784 ENSG00000144645 OSBPL10 ORP10|OSBP9 oxysterol binding protein like 10 protein-coding chr3-2533 chr3 45226309 45226519 + 7.89 0.000 promoter-TSS (NM_015444) promoter-TSS (NM_015444) -127 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr4-7746 chr4 93110382 93110592 + 7.89 0.000 intron (NM_001510, intron 3 of 15) intron (NM_001510, intron 3 of 15) -718266 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr5-7810 chr5 66149374 66149584 + 7.89 0.000 intron (NM_139168, intron 1 of 12) intron (NM_139168, intron 1 of 12) 4644 NM_139168 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding chr6-8204 chr6 134911665 134911875 + 7.89 0.000 Intergenic Intergenic 38331 NM_170771 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding chr12-5036 chr12 87661350 87661560 + 7.89 0.000 Intergenic Intergenic -107357 NR_149056 110806294 Hs.615803 NR_149056 LINC02258 - long intergenic non-protein coding RNA 2258 ncRNA chr11-5218 chr11 16285718 16285928 + 7.89 0.000 intron (NM_033326, intron 3 of 15) intron (NM_033326, intron 3 of 15) 70723 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr15-1589 chr15 76217418 76217628 + 7.89 0.000 intron (NM_000126, intron 11 of 11) intron (NM_000126, intron 11 of 11) -36037 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr3-5101 chr3 48982933 48983143 + 7.89 0.000 intron (NM_001349209, intron 15 of 15) intron (NM_001349209, intron 15 of 15) -6870 NM_177938 54681 Hs.654944 NM_017732 ENSG00000178467 P4HTM EGLN4|HIFPH4|P4H-TM|PH-4|PH4|PHD4 prolyl 4-hydroxylase, transmembrane protein-coding chr19-2088 chr19 46638592 46638802 + 7.89 0.000 Intergenic CpG -4015 NM_033258 94235 Hs.283961 NM_033258 ENSG00000167414 GNG8 - G protein subunit gamma 8 protein-coding chr11-7047 chr11 119877922 119878132 + 7.89 0.000 Intergenic Intergenic 148444 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr2-11008 chr2 102787635 102787845 + 7.89 0.000 intron (NM_001321346, intron 3 of 3) intron (NM_001321346, intron 3 of 3) 25709 NM_144632 130827 Hs.436203 NM_144632 ENSG00000170417 TMEM182 - transmembrane protein 182 protein-coding chr10-8068 chr10 66461039 66461249 + 7.89 0.000 intron (NM_001127384, intron 11 of 17) intron (NM_001127384, intron 11 of 17) -464892 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr5-7804 chr5 65927745 65927955 + 7.89 0.000 intron (NM_001253697, intron 1 of 25) intron (NM_001253697, intron 1 of 25) 1275 NM_018695 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr9-6733 chr9 13336593 13336803 + 7.89 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -56985 NM_001330637 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr10-8637 chr10 98963788 98963998 + 7.89 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) -39325 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr15-2628 chr15 68415772 68415982 + 7.89 0.000 intron (NM_001004439, intron 1 of 29) intron (NM_001004439, intron 1 of 29) 16286 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr11-3453 chr11 67023883 67024093 + 7.89 0.000 intron (NM_001318775, intron 1 of 6) intron (NM_001318775, intron 1 of 6) 854 NM_177963 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr5-7984 chr5 83991952 83992162 + 7.89 0.000 intron (NM_001278642, intron 8 of 9) intron (NM_001278642, intron 8 of 9) -271202 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr17-7483 chr17 16027026 16027236 + 7.89 0.000 intron (NM_017775, intron 9 of 9) intron (NM_017775, intron 9 of 9) 27307 NM_001271420 54902 Hs.462316 NM_017775 ENSG00000011295 TTC19 2010204O13Rik|MC3DN2 tetratricopeptide repeat domain 19 protein-coding chr8-7218 chr8 126708837 126709047 + 7.89 0.000 Intergenic LTR78|LTR|ERV1 -150464 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr5-8898 chr5 156007614 156007824 + 7.89 0.000 Intergenic Intergenic -319038 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr1-10125 chr1 101360710 101360920 + 7.89 0.000 intron (NR_126402, intron 4 of 4) HERVL-int|LTR|ERVL 36978 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr5-7747 chr5 60494082 60494292 + 7.89 0.000 intron (NR_024617, intron 1 of 3) intron (NR_024617, intron 1 of 3) 2099 NM_001364599 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-11020 chr2 106554173 106554383 + 7.89 0.000 Intergenic MER20|DNA|hAT-Charlie 66914 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr15-3042 chr15 59777601 59777811 + 7.89 0.000 Intergenic Intergenic -88386 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr2-10939 chr2 78132284 78132494 + 7.89 0.000 intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) 43659 NR_110287 101927948 Hs.639404 NR_110287 ENSG00000229494 LOC101927948 - uncharacterized LOC101927948 ncRNA chr14-3082 chr14 63564259 63564469 + 7.89 0.000 Intergenic L1M4|LINE|L1 -20969 NM_001354926 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr3-3546 chr3 47856526 47856736 + 7.89 0.000 intron (NM_002375, intron 16 of 18) AluSz|SINE|Alu 7076 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr2-12317 chr2 47544360 47544570 + 7.89 0.000 intron (NM_022055, intron 1 of 1) intron (NM_022055, intron 1 of 1) 16928 NR_120602 644093 Hs.734158 NR_120602 ENSG00000235760 HCG2040054 - uncharacterized LOC644093 ncRNA chr1-7374 chr1 23718669 23718879 + 7.89 0.000 Intergenic Intergenic -24592 NM_003198 6924 Hs.15535 NM_003198 ENSG00000011007 ELOA SIII|SIII p110|TCEB3|TCEB3A elongin A protein-coding chr2-14652 chr2 235667446 235667656 + 7.89 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -149630 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr5-8705 chr5 142486659 142486869 + 7.89 0.000 Intergenic Intergenic 134570 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr8-7387 chr8 139021893 139022103 + 7.89 0.000 Intergenic Intergenic -107957 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr17-6612 chr17 60971776 60971986 + 7.89 0.000 intron (NM_001330413, intron 14 of 25) HERVL40-int|LTR|ERVL 294030 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr17-2875 chr17 33929825 33930035 + 7.89 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 226876 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chrX-1696 chrX 14967709 14967919 + 7.89 0.000 Intergenic L1PA7|LINE|L1 82523 NM_001177475 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr13-2371 chr13 39831528 39831738 + 7.89 0.000 Intergenic Intergenic -167498 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr17-5812 chr17 64604554 64604764 + 7.89 0.000 intron (NM_022739, intron 2 of 18) intron (NM_022739, intron 2 of 18) 57648 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr5-2660 chr5 14678541 14678751 + 7.89 0.000 intron (NM_138348, intron 2 of 6) intron (NM_138348, intron 2 of 6) 13928 NM_138348 90268 Hs.406335 NM_138348 ENSG00000154124 OTULIN AIPDS|FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding chr10-4797 chr10 7696393 7696603 + 7.89 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -6818 NM_002216 3698 Hs.75285 NM_002216 ENSG00000151655 ITIH2 H2P|SHAP inter-alpha-trypsin inhibitor heavy chain 2 protein-coding chrX-4372 chrX 50143095 50143305 + 7.89 0.000 Intergenic L2a|LINE|L2 57172 NM_139289 8852 Hs.97633 NM_003886 ENSG00000147081 AKAP4 AKAP 82|AKAP-4|AKAP82|CT99|FSC1|HI|PRKA4|hAKAP82|p82 A-kinase anchoring protein 4 protein-coding chrX-1327 chrX 132809121 132809331 + 7.89 0.000 intron (NM_001077188, intron 3 of 5) AluSx|SINE|Alu 141584 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr1-12728 chr1 57735407 57735617 + 7.89 0.000 intron (NM_001353980, intron 3 of 5) L2b|LINE|L2 -125069 NR_104362 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr10-6695 chr10 120079393 120079603 + 7.89 0.000 Intergenic LTR101_Mam|LTR|ERVL 120985 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr13-2170 chr13 113335544 113335754 + 7.89 0.000 intron (NM_024719, intron 5 of 7) L1MA4|LINE|L1 -16024 NR_046541 100874068 Hs.661837 NR_046541 GRTP1-AS1 - GRTP1 antisense RNA 1 ncRNA chr4-4497 chr4 59569537 59569747 + 7.89 0.000 Intergenic L1PA7|LINE|L1 556069 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr11-8897 chr11 15826932 15827142 + 7.89 0.000 Intergenic Intergenic 142584 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr5-3407 chr5 146108025 146108235 + 7.89 0.000 Intergenic AluJb|SINE|Alu -2553 NM_001029869 153770 Hs.162369 NM_001029869 ENSG00000173261 PLAC8L1 - PLAC8 like 1 protein-coding chr14-3689 chr14 102342380 102342590 + 7.89 0.000 3' UTR (NM_018335, exon 8 of 8) 3' UTR (NM_018335, exon 8 of 8) 20405 NM_032630 51550 Hs.129634 NM_032630 ENSG00000100865 CINP - cyclin dependent kinase 2 interacting protein protein-coding chr15-1595 chr15 77683599 77683809 + 7.89 0.000 intron (NM_001301194, intron 2 of 3) L1ME3G|LINE|L1 12444 NM_001301200 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr16-4369 chr16 47917592 47917802 + 7.89 0.000 Intergenic Intergenic -30567 NR_110649 100507534 Hs.407601 NR_110649 ENSG00000261325 LINC02192 - long intergenic non-protein coding RNA 2192 ncRNA chr12-1679 chr12 100200018 100200228 + 7.89 0.000 promoter-TSS (NM_022496) promoter-TSS (NM_022496) 36 NM_022496 64431 Hs.115088 NM_022496 ENSG00000075089 ACTR6 ARP6|CDA12|HSPC281|MSTP136|hARP6|hARPX actin related protein 6 protein-coding chr7-5147 chr7 5883037 5883247 + 7.89 0.000 intron (NM_001097622, intron 2 of 3) intron (NM_001097622, intron 2 of 3) 2344 NM_001097622 654231 Hs.571315 NM_001097622 ENSG00000122543 OCM OCM1|OM|ONCM oncomodulin protein-coding chr19-1317 chr19 42553434 42553644 + 7.89 0.000 intron (NR_073180, intron 2 of 2) intron (NR_073180, intron 2 of 2) -25058 NM_001184816 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr15-2379 chr15 50390782 50390992 + 7.89 0.000 Intergenic MER21-int|LTR|ERVL 30558 NR_039862 100616396 NR_039862 ENSG00000284284 MIR4712 - microRNA 4712 ncRNA chr2-12768 chr2 85445557 85445767 + 7.89 0.000 Intergenic AluJr|SINE|Alu 26731 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr4-1810 chr4 52864965 52865175 + 7.89 0.000 intron (NM_023940, intron 3 of 3) intron (NM_023940, intron 3 of 3) 2753 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr12-6112 chr12 125191729 125191939 + 7.89 0.000 intron (NM_001366854, intron 1 of 8) MIRc|SINE|MIR 5448 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr18-1899 chr18 30757133 30757343 + 7.89 0.000 Intergenic L1MA4|LINE|L1 285504 NM_001941 1825 Hs.41690 NM_001941 ENSG00000134762 DSC3 CDHF3|DSC|DSC1|DSC2|DSC4|HT-CP desmocollin 3 protein-coding chr6-4921 chr6 97835155 97835365 + 7.89 0.000 Intergenic Intergenic -189271 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr5-8329 chr5 117966389 117966599 + 7.89 0.000 intron (NR_104997, intron 2 of 2) intron (NR_104997, intron 2 of 2) 236133 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr1-12441 chr1 14559214 14559424 + 7.89 0.000 Intergenic Intergenic -39366 NM_201628 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr16-4435 chr16 53170644 53170854 + 7.89 0.000 intron (NM_001352127, intron 2 of 38) intron (NM_001352127, intron 2 of 38) 14823 NM_001308319 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr4-5038 chr4 141066056 141066266 + 7.89 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 67308 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr9-3654 chr9 94897706 94897916 + 7.89 0.000 intron (NM_032823, intron 5 of 14) L1ME4b|LINE|L1 47743 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr8-2596 chr8 53868182 53868392 + 7.89 0.000 intron (NM_001286674, intron 1 of 2) intron (NM_001286674, intron 1 of 2) -12585 NR_104578 8601 Hs.368733 NM_003702 ENSG00000147509 RGS20 RGSZ1|ZGAP1|g(z)GAP|gz-GAP regulator of G protein signaling 20 protein-coding chr7-4815 chr7 97776791 97777001 + 7.89 0.000 Intergenic LTR16C|LTR|ERVL 44810 NM_013996 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding KI270590.1-2 KI270590.1 2380 2590 + 7.89 0.000 NA NA NA NA chr16-6551 chr16 64778008 64778218 + 7.89 0.000 Intergenic Intergenic 343950 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr5-6074 chr5 8566617 8566827 + 7.89 0.000 Intergenic Intergenic 105797 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr14-2414 chr14 61620507 61620717 + 7.89 0.000 intron (NR_039985, intron 1 of 2) intron (NR_039985, intron 1 of 2) -49959 NR_110416 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr4-2111 chr4 56311318 56311528 + 7.89 0.000 intron (NM_020722, intron 6 of 10) intron (NM_020722, intron 6 of 10) 76068 NM_001286668 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr12-7847 chr12 103606476 103606686 + 7.89 0.000 intron (NM_017564, intron 3 of 68) L1ME1|LINE|L1 19308 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chr4-3893 chr4 145102778 145102988 + 7.89 0.000 intron (NM_001040876, intron 1 of 17) L2a|LINE|L2 -4342 NM_001256708 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr11-5280 chr11 35794420 35794630 + 7.89 0.000 intron (NM_017583, intron 4 of 4) intron (NM_017583, intron 4 of 4) 131750 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr8-4002 chr8 56113419 56113629 + 7.89 0.000 exon (NM_005372, exon 1 of 1) exon (NM_005372, exon 1 of 1) 458 NM_005372 4342 Hs.533432 NM_005372 ENSG00000172680 MOS MSV MOS proto-oncogene, serine/threonine kinase protein-coding chr19-3874 chr19 31348618 31348828 + 7.89 0.000 intron (NR_138034, intron 1 of 1) intron (NR_138034, intron 1 of 1) 713 NR_138036 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr20-3364 chr20 32857041 32857251 + 7.89 0.000 Intergenic Intergenic -1777 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr17-5113 chr17 5640803 5641013 + 7.89 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -56399 NM_033004 22861 Hs.652273 NM_014922 ENSG00000091592 NLRP1 AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family pyrin domain containing 1 protein-coding chr6-6350 chr6 57130867 57131077 + 7.89 0.000 intron (NM_015555, intron 5 of 13) intron (NM_015555, intron 5 of 13) 40784 NM_001031623 26036 Hs.485628 NM_015555 ENSG00000112200 ZNF451 COASTER|dJ417I1.1 zinc finger protein 451 protein-coding chr7-9113 chr7 107115738 107115948 + 7.89 0.000 intron (NM_002736, intron 2 of 10) MLT1I|LTR|ERVL-MaLR -53118 NM_001244262 26959 Hs.162032 NM_012257 ENSG00000105856 HBP1 - HMG-box transcription factor 1 protein-coding chr9-3145 chr9 101486318 101486528 + 7.89 0.000 promoter-TSS (NM_001371233) promoter-TSS (NM_001371233) 45 NM_001371233 chr3-6214 chr3 64427852 64428062 + 7.89 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -133389 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr11-8012 chr11 13952258 13952468 + 7.89 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -10360 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr4-5672 chr4 18241031 18241241 + 7.89 0.000 Intergenic Intergenic -219261 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr2-8282 chr2 101995911 101996121 + 7.89 0.000 intron (NM_004633, intron 1 of 8) intron (NM_004633, intron 1 of 8) -2945 NR_048564 7850 Hs.25333 NM_004633 ENSG00000115590 IL1R2 CD121b|CDw121b|IL-1R-2|IL-1RT-2|IL-1RT2|IL1R2c|IL1RB interleukin 1 receptor type 2 protein-coding chr6-8450 chr6 153766439 153766649 + 7.89 0.000 Intergenic Intergenic -243952 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr7-5319 chr7 26304446 26304656 + 7.89 0.000 intron (NM_001318199, intron 1 of 6) intron (NM_001318199, intron 1 of 6) 11520 NM_001318199 29887 Hs.741316 NM_013322 ENSG00000086300 SNX10 OPTB8 sorting nexin 10 protein-coding chr7-7755 chr7 1341691 1341901 + 7.89 0.000 Intergenic Intergenic 108924 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr7-8547 chr7 55912878 55913088 + 7.89 0.000 intron (NM_182633, intron 4 of 6) intron (NM_182633, intron 4 of 6) 25527 NM_182633 349075 Hs.660834 NM_182633 ENSG00000178665 ZNF713 - zinc finger protein 713 protein-coding chr12-7937 chr12 109005795 109006005 + 7.89 0.000 intron (NM_018711, intron 1 of 15) L2c|LINE|L2 15168 NM_018711 55530 Hs.4221 NM_018711 ENSG00000166111 SVOP - SV2 related protein protein-coding chr22-3272 chr22 46674412 46674622 + 7.89 0.000 intron (NM_015124, intron 15 of 18) intron (NM_015124, intron 15 of 18) 54131 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr11-8181 chr11 63467973 63468183 + 7.89 0.000 intron (NM_054108, intron 4 of 5) intron (NM_054108, intron 4 of 5) 23089 NM_001146729 117245 Hs.410316 NM_054108 ENSG00000168004 PLAAT5 HRASLS5|HRLP5|HRSL5|PLAAT-5|RLP1|iNAT phospholipase A and acyltransferase 5 protein-coding chr15-1693 chr15 62453250 62453460 + 7.89 0.000 Intergenic Intergenic 110326 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr15-3029 chr15 58432595 58432805 + 7.89 0.000 intron (NM_000236, intron 1 of 8) intron (NM_000236, intron 1 of 8) 709 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr20-3953 chr20 34099652 34099862 + 7.89 0.000 intron (NM_003908, intron 3 of 8) MER21C|LTR|ERVL 12486 NM_001316364 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr10-9164 chr10 129315075 129315285 + 7.89 0.000 Intergenic L3|LINE|CR1 -152061 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr3-7853 chr3 122925934 122926144 + 7.89 0.000 intron (NR_046079, intron 9 of 22) L3|LINE|CR1 39526 NR_024618 100129550 Hs.61558 NR_024618 ENSG00000273033 LINC02035 - long intergenic non-protein coding RNA 2035 ncRNA chr7-7710 chr7 315216 315426 + 7.89 0.000 Intergenic L1MEc|LINE|L1 -64104 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr10-7312 chr10 132818038 132818248 + 7.89 0.000 intron (NM_001200049, intron 50 of 57) intron (NM_001200049, intron 50 of 57) -31996 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr12-4553 chr12 27573817 27574027 + 7.89 0.000 intron (NM_003622, intron 1 of 29) AluJo|SINE|Alu 49716 NM_003622 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr5-3606 chr5 115262210 115262420 + 7.89 0.000 intron (NM_005023, intron 1 of 8) intron (NM_005023, intron 1 of 8) 562 NM_005023 5229 Hs.254006 NM_005023 ENSG00000164219 PGGT1B BGGI|GGTI protein geranylgeranyltransferase type I subunit beta protein-coding chr1-9117 chr1 17875878 17876088 + 7.89 0.000 Intergenic Intergenic 120650 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr6-8027 chr6 118832944 118833154 + 7.89 0.000 intron (NM_017696, intron 7 of 11) MLT1J2|LTR|ERVL-MaLR 50341 NR_037662 100287632 Hs.334026 NR_037662 SELENOKP3 - selenoprotein K pseudogene 3 pseudo chr14-4581 chr14 49798998 49799208 + 7.89 0.000 intron (NM_001301732, intron 24 of 31) AluJb|SINE|Alu 30950 NM_014315 23588 Hs.509264 NM_014315 ENSG00000165516 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding chr2-13231 chr2 124533909 124534119 + 7.89 0.000 intron (NM_130773, intron 10 of 23) intron (NM_130773, intron 10 of 23) 508727 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr6-6088 chr6 146997101 146997311 + 7.89 0.000 intron (NR_034115, intron 6 of 10) MER57E1|LTR|ERV1 -161719 NR_132442 106182249 Hs.575390 NR_132442 ENSG00000196634 LUADT1 - lung adenocarcinoma associated transcript 1 ncRNA chr2-10338 chr2 159150676 159150886 + 7.89 0.000 intron (NM_001350063, intron 6 of 24) intron (NM_001350063, intron 6 of 24) -36054 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr19-4064 chr19 10131712 10131922 + 7.89 0.000 Intergenic AluSx1|SINE|Alu -11918 NM_003755 8666 Hs.529059 NM_003755 ENSG00000130811 EIF3G EIF3-P42|EIF3S4|eIF3-delta|eIF3-p44 eukaryotic translation initiation factor 3 subunit G protein-coding chr1-12973 chr1 154792913 154793123 + 7.89 0.000 intron (NM_170782, intron 2 of 7) intron (NM_170782, intron 2 of 7) 66858 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr13-4365 chr13 106630010 106630220 + 7.89 0.000 intron (NR_051977, intron 3 of 3) G-rich|Low_complexity|Low_complexity 12305 NR_051977 283483 Hs.651365 NR_051977 ENSG00000272274 LINC00551 - long intergenic non-protein coding RNA 551 ncRNA chr4-3123 chr4 168856311 168856521 + 7.89 0.000 intron (NM_001367567, intron 1 of 11) L1PA16|LINE|L1 24321 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chrX-5094 chrX 127491328 127491538 + 7.89 0.000 Intergenic L1M1|LINE|L1 560970 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr20-4320 chr20 52386990 52387200 + 7.89 0.000 Intergenic L4_B_Mam|LINE|RTE-X -195110 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr4-4922 chr4 123857090 123857300 + 7.89 0.000 intron (NR_027105, intron 4 of 5) intron (NR_027105, intron 4 of 5) 82931 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr22-2472 chr22 20647811 20648021 + 7.89 0.000 Intergenic Intergenic -41639 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin like 4, pseudogene pseudo chr12-7995 chr12 111685301 111685511 + 7.89 0.000 promoter-TSS (NM_001136538) promoter-TSS (NM_001136538) 550 NM_006768 8315 Hs.530940 NM_006768 ENSG00000089234 BRAP BRAP2|IMP|RNF52 BRCA1 associated protein protein-coding chr8-7192 chr8 124740819 124741029 + 7.89 0.000 Intergenic Intergenic -12417 NM_014751 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr6-2989 chr6 41823674 41823884 + 7.89 0.000 intron (NM_001286554, intron 1 of 5) intron (NM_001286554, intron 1 of 5) 36336 NM_001134493 100188893 Hs.731633 NM_001134493 ENSG00000214736 TOMM6 OBTP|TOM6 translocase of outer mitochondrial membrane 6 protein-coding chr2-11108 chr2 130019748 130019958 + 7.89 0.000 Intergenic Intergenic 31278 NR_026758 440905 Hs.469918 NM_001013711 ENSG00000286058 FAR2P1 HEL-182 fatty acyl-CoA reductase 2 pseudogene 1 pseudo chr4-6227 chr4 60851983 60852193 + 7.89 0.000 Intergenic L1PA7|LINE|L1 -70531 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr17-5418 chr17 34781623 34781833 + 7.89 0.000 Intergenic Intergenic 179732 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr12-2381 chr12 26043130 26043340 + 7.89 0.000 intron (NM_001164747, intron 2 of 5) intron (NM_001164747, intron 2 of 5) -9329 NM_001164746 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr15-3476 chr15 95016719 95016929 + 7.89 0.000 Intergenic Intergenic 161461 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr14-1357 chr14 103023896 103024106 + 7.89 0.000 intron (NM_006035, intron 1 of 36) intron (NM_006035, intron 1 of 36) 33548 NM_006035 9578 Hs.654634 NM_006035 ENSG00000198752 CDC42BPB MRCKB CDC42 binding protein kinase beta protein-coding chr14-3926 chr14 103130028 103130238 + 7.89 0.000 intron (NM_001371220, intron 5 of 12) intron (NM_001371220, intron 5 of 12) 3827 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr6-3236 chr6 143921187 143921397 + 7.89 0.000 intron (NM_001013623, intron 6 of 7) L2a|LINE|L2 40118 NM_001317157 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr1-14098 chr1 30604605 30604815 + 7.89 0.000 Intergenic MIR|SINE|MIR -114062 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr3-5080 chr3 45321634 45321844 + 7.89 0.000 Intergenic Intergenic -66837 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr12-3706 chr12 4565493 4565703 + 7.89 0.000 intron (NM_001371301, intron 1 of 14) intron (NM_001371301, intron 1 of 14) 3390 NM_001371301 chr2-6114 chr2 214856277 214856487 + 7.89 0.000 intron (NR_110292, intron 2 of 3) intron (NR_110292, intron 2 of 3) 9435 NR_145773 109617008 NR_145773 ENSG00000207274 SNORA70I - small nucleolar RNA, H/ACA box 70I snoRNA chr9-7026 chr9 120456906 120457116 + 7.89 0.000 intron (NR_073558, intron 20 of 37) intron (NR_073558, intron 20 of 37) 123156 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr1-12300 chr1 239568529 239568739 + 7.89 0.000 intron (NM_001347716, intron 3 of 7) intron (NM_001347716, intron 3 of 7) -60439 NM_000740 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr15-5223 chr15 96539589 96539799 + 7.89 0.000 Intergenic Intergenic 205929 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr12-6964 chr12 27813176 27813386 + 7.89 0.000 Intergenic AluSz|SINE|Alu 33048 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr20-4261 chr20 49395317 49395527 + 7.89 0.000 intron (NM_004975, intron 1 of 1) intron (NM_004975, intron 1 of 1) 87246 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr9-7615 chr9 37575177 37575387 + 7.89 0.000 intron (NM_012166, intron 1 of 10) intron (NM_012166, intron 1 of 10) 1098 NM_012166 26267 Hs.709527 NM_012166 ENSG00000147912 FBXO10 FBX10|PRMT11 F-box protein 10 protein-coding chr3-7532 chr3 179534555 179534765 + 7.89 0.000 Intergenic LTR33|LTR|ERVL -28220 NM_177989 86 Hs.435326 NM_004301 ENSG00000136518 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin like 6A protein-coding chr15-4758 chr15 69508401 69508611 + 7.89 0.000 Intergenic Intergenic -53214 NR_026979 145837 Hs.410126 NR_026979 DRAIC - downregulated RNA in cancer, inhibitor of cell invasion and migration ncRNA chr11-8277 chr11 69525604 69525814 + 7.89 0.000 Intergenic L2a|LINE|L2 40148 NR_120545 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr12-1649 chr12 26151022 26151232 + 7.89 0.000 Intergenic Intergenic -26090 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr7-7793 chr7 2065606 2065816 + 7.89 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 23341 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr16-4507 chr16 58154474 58154684 + 7.89 0.000 Intergenic Intergenic -25154 NR_136632 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr4-6570 chr4 186724704 186724914 + 7.89 0.000 promoter-TSS (NM_005245) promoter-TSS (NM_005245) -953 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr7-5732 chr7 73421967 73422177 + 7.89 0.000 Intergenic Intergenic -11706 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr6-8209 chr6 135156244 135156454 + 7.89 0.000 Intergenic L1PA7|LINE|L1 -24959 NR_134958 4602 Hs.606320 NM_005375 ENSG00000118513 MYB Cmyb|c-myb|c-myb_CDS|efg MYB proto-oncogene, transcription factor protein-coding chr7-5432 chr7 36910723 36910933 + 7.89 0.000 intron (NM_001206480, intron 16 of 21) intron (NM_001206480, intron 16 of 21) 8604 NR_031604 100302113 NR_031604 ENSG00000221325 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA chr1-11615 chr1 232362779 232362989 + 7.89 0.000 Intergenic Intergenic 152724 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chrX-713 chrX 107716111 107716321 + 7.89 0.000 intron (NM_198057, intron 1 of 2) CpG 292 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr2-9511 chr2 237366622 237366832 + 7.89 0.000 exon (NM_057167, exon 10 of 43) exon (NM_057167, exon 10 of 43) 47437 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr8-3497 chr8 106704981 106705191 + 7.89 0.000 intron (NM_181354, intron 6 of 13) intron (NM_181354, intron 6 of 13) -21021 NM_001198534 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr19-4293 chr19 776687 776897 + 7.89 0.000 Intergenic Intergenic -20660 NM_031990 5725 Hs.172550 NM_002819 ENSG00000011304 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding chr14-2885 chr14 35365075 35365285 + 7.89 0.000 Intergenic Intergenic 39574 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr20-4439 chr20 61666345 61666555 + 7.89 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 53298 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr1-10858 chr1 205003762 205003972 + 7.89 0.000 intron (NM_001005388, intron 27 of 29) intron (NM_001005388, intron 27 of 29) -39082 NM_001346083 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr1-15793 chr1 176349619 176349829 + 7.89 0.000 Intergenic LTR12C|LTR|ERV1 -113451 NM_020318 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr9-7281 chr9 7634964 7635174 + 7.89 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 164709 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr6-5752 chr6 157063488 157063698 + 7.89 0.000 intron (NM_001363725, intron 2 of 17) intron (NM_001363725, intron 2 of 17) 27166 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr1-8348 chr1 57489815 57490025 + 7.89 0.000 intron (NM_001353980, intron 4 of 5) MLT1A0|LTR|ERVL-MaLR -64999 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr12-4759 chr12 52555476 52555686 + 7.89 0.000 Intergenic L1PA8A|LINE|L1 -2436 NM_033448 112802 Hs.660007 NM_033448 ENSG00000139648 KRT71 HYPT13|K6IRS1|KRT6IRS|KRT6IRS1 keratin 71 protein-coding chr8-6203 chr8 35961749 35961959 + 7.89 0.000 Intergenic L1PA16|LINE|L1 -251534 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr5-4680 chr5 38202903 38203113 + 7.89 0.000 Intergenic Intergenic 54528 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA chr11-3294 chr11 86519736 86519946 + 7.89 0.000 intron (NM_001014811, intron 3 of 13) intron (NM_001014811, intron 3 of 13) 144954 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr9-4618 chr9 109331416 109331626 + 7.89 0.000 Intergenic Intergenic -10557 NM_019114 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr7-6141 chr7 124330298 124330508 + 7.89 0.000 Intergenic Intergenic 21693 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr2-9682 chr2 38274640 38274850 + 7.89 0.000 Intergenic Intergenic 101785 NM_001330459 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr5-8028 chr5 89457754 89457964 + 7.89 0.000 intron (NR_136221, intron 5 of 6) intron (NR_136221, intron 5 of 6) -553754 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr7-6900 chr7 73319171 73319381 + 7.89 0.000 intron (NM_178125, intron 3 of 6) intron (NM_178125, intron 3 of 6) 6299 NM_001281451 135892 Hs.647053 NM_178125 ENSG00000146755 TRIM50 TRIM50A tripartite motif containing 50 protein-coding chr6-6458 chr6 106200147 106200357 + 7.89 0.000 intron (NR_104402, intron 5 of 5) intron (NR_104402, intron 5 of 5) 101311 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr2-9445 chr2 233926941 233927151 + 7.89 0.000 intron (NM_024080, intron 2 of 25) intron (NM_024080, intron 2 of 25) 9673 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|LTrpC-6|TRPP8|trp-p8 transient receptor potential cation channel subfamily M member 8 protein-coding chr6-7580 chr6 73685873 73686083 + 7.89 0.000 Intergenic L1MA9|LINE|L1 -10107 NM_001159587 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr4-7801 chr4 98141309 98141519 + 7.89 0.000 intron (NM_174952, intron 1 of 10) MER4E|LTR|ERV1 2062 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr7-6373 chr7 151162974 151163184 + 7.89 0.000 intron (NM_001098834, intron 1 of 1) AluSp|SINE|Alu 4469 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr18-2706 chr18 62877630 62877840 + 7.89 0.000 intron (NM_194449, intron 4 of 16) intron (NM_194449, intron 4 of 16) 162194 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr6-7448 chr6 55523126 55523336 + 7.89 0.000 intron (NM_001287746, intron 4 of 9) intron (NM_001287746, intron 4 of 9) 55983 NR_109867 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr12-1997 chr12 132784625 132784835 + 7.89 0.000 intron (NM_001172557, intron 15 of 15) (CA)n|Simple_repeat|Simple_repeat -22898 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr1-13432 chr1 2930571 2930781 + 7.89 0.000 Intergenic CpG -90791 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr19-4681 chr19 17790941 17791151 + 7.89 0.000 Intergenic AluSx1|SINE|Alu -4092 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr2-12568 chr2 69566055 69566265 + 7.89 0.000 intron (NM_014911, intron 2 of 21) intron (NM_014911, intron 2 of 21) -45989 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chrX-5108 chrX 128326760 128326970 + 7.89 0.000 Intergenic Intergenic -274462 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr7-8575 chr7 65610108 65610318 + 7.89 0.000 Intergenic LTR16A|LTR|ERVL -37641 NR_027392 644619 Hs.676517 NR_027392 ENSG00000273024 INTS4P2 INTS4L2 integrator complex subunit 4 pseudogene 2 pseudo chr14-1363 chr14 103808520 103808730 + 7.89 0.000 intron (NM_015316, intron 1 of 16) intron (NM_015316, intron 1 of 16) 38950 NM_015316 23368 Hs.709297 NM_015316 ENSG00000088808 PPP1R13B ASPP1|p53BP2-like|p85 protein phosphatase 1 regulatory subunit 13B protein-coding chr18-1636 chr18 55101270 55101480 + 7.89 0.000 Intergenic MER5B|DNA|hAT-Charlie 22931 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr14-2079 chr14 70206031 70206241 + 7.89 0.000 intron (NR_135825, intron 2 of 3) intron (NR_135825, intron 2 of 3) -17066 NM_033262 6547 Hs.337696 NM_033262 ENSG00000100678 SLC8A3 NCX3 solute carrier family 8 member A3 protein-coding chr4-5214 chr4 165802581 165802791 + 7.89 0.000 Intergenic Intergenic -59615 NR_121677 101928131 Hs.406479 NR_121677 LOC101928131 - uncharacterized LOC101928131 ncRNA chr6-2976 chr6 39804758 39804968 + 7.89 0.000 intron (NM_015345, intron 1 of 24) intron (NM_015345, intron 1 of 24) 11866 NM_015345 23500 Hs.357128 NM_015345 ENSG00000146122 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding chr15-4946 chr15 78308475 78308685 + 7.89 0.000 Intergenic Intergenic -8971 NM_001303247 80349 Hs.513055 NM_025234 ENSG00000140395 WDR61 REC14|SKI8 WD repeat domain 61 protein-coding chr13-3864 chr13 51069998 51070208 + 7.89 0.000 Intergenic Intergenic -3946 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr12-7453 chr12 63028150 63028360 + 7.89 0.000 Intergenic Intergenic -93105 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr5-8554 chr5 135881186 135881396 + 7.89 0.000 intron (NR_146141, intron 8 of 8) intron (NR_146141, intron 8 of 8) 14550 NM_000590 3578 Hs.960 NM_000590 ENSG00000145839 IL9 HP40|IL-9|P40 interleukin 9 protein-coding chr12-4511 chr12 23245237 23245447 + 7.89 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 69706 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr5-8510 chr5 133844842 133845052 + 7.89 0.000 Intergenic Intergenic -68730 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr7-9581 chr7 147265489 147265699 + 7.89 0.000 intron (NM_014141, intron 7 of 22) L1PA10|LINE|L1 112527 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr2-9817 chr2 146318138 146318348 + 7.89 0.000 Intergenic Intergenic -268814 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr11-7763 chr11 82300695 82300905 + 7.89 0.000 intron (NR_120571, intron 3 of 7) MER3|DNA|hAT-Charlie 103113 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr19-5465 chr19 35562681 35562891 + 7.89 0.000 intron (NM_000704, intron 3 of 21) (TCTC)n|Simple_repeat|Simple_repeat 872 NM_000704 495 Hs.36992 NM_000704 ENSG00000105675 ATP4A ATP6A ATPase H+/K+ transporting subunit alpha protein-coding chr11-4301 chr11 68196116 68196326 + 7.89 0.000 intron (NR_161380, intron 1 of 10) L2c|LINE|L2 17075 NM_001369424 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr1-10490 chr1 164789586 164789796 + 7.89 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) -15050 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr10-4479 chr10 79557295 79557505 + 7.89 0.000 exon (NM_001320813, exon 6 of 6) exon (NM_001320813, exon 6 of 6) 2471 NM_001320814 729238 Hs.523084 NM_001098668 ENSG00000185303 SFTPA2 COLEC5|PSAP|PSP-A|PSPA|SFTP1|SFTPA2B|SP-2A|SP-A|SPA2|SPAII surfactant protein A2 protein-coding chr2-12129 chr2 36672311 36672521 + 7.89 0.000 Intergenic Intergenic -24274 NM_001177969 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr9-4228 chr9 76875772 76875982 + 7.89 0.000 intron (NM_001308048, intron 1 of 17) MER5A|DNA|hAT-Charlie 30210 NR_131751 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr5-7710 chr5 58133898 58134108 + 7.89 0.000 Intergenic Intergenic -11662 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr13-2578 chr13 69834034 69834244 + 7.89 0.000 intron (NM_001286725, intron 5 of 9) L1PB1|LINE|L1 -273074 NR_002717 6315 Hs.676453 NR_002717 ATXN8OS KLHL1AS|NCRNA00003|SCA8 ATXN8 opposite strand lncRNA ncRNA chr5-4613 chr5 32048779 32048989 + 7.89 0.000 intron (NM_178140, intron 8 of 24) intron (NM_178140, intron 8 of 24) -112725 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr3-10919 chr3 172858276 172858486 + 7.89 0.000 Intergenic MamRep4096|DNA|hAT-Tip100 107379 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr16-2265 chr16 1993793 1994003 + 7.89 0.000 3' UTR (NM_004209, exon 4 of 4) 3' UTR (NM_004209, exon 4 of 4) 3928 NM_004209 9143 Hs.435277 NM_004209 ENSG00000127561 SYNGR3 - synaptogyrin 3 protein-coding chr5-6571 chr5 18258372 18258582 + 7.89 0.000 Intergenic Intergenic 451203 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr4-8186 chr4 132188890 132189100 + 7.89 0.000 Intergenic Intergenic -402094 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr4-5005 chr4 138706188 138706398 + 7.89 0.000 Intergenic Intergenic 306353 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr12-6958 chr12 27303408 27303618 + 7.89 0.000 intron (NM_015000, intron 3 of 13) L2b|LINE|L2 -29323 NM_001248003 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr2-11755 chr2 11579125 11579335 + 7.89 0.000 intron (NM_014668, intron 6 of 32) intron (NM_014668, intron 6 of 32) 36544 NM_033090 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr1-10661 chr1 183312331 183312541 + 7.89 0.000 intron (NM_015039, intron 1 of 10) L1MC4|LINE|L1 -7562 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding GL000218.1-2 GL000218.1 57644 57854 + 7.89 0.000 NA NA NA NA chr6-8152 chr6 130796214 130796424 + 7.89 0.000 Intergenic Intergenic -31086 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr3-5481 chr3 188259491 188259701 + 7.89 0.000 intron (NM_005578, intron 2 of 10) L2c|LINE|L2 34191 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chrX-2130 chrX 31739681 31739891 + 7.89 0.000 intron (NM_000109, intron 51 of 78) L1PA8|LINE|L1 -231488 NM_004014 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr4-3290 chr4 142773640 142773850 + 7.89 0.000 intron (NM_001331040, intron 1 of 25) intron (NM_001331040, intron 1 of 25) 72790 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr3-10630 chr3 147113555 147113765 + 7.89 0.000 Intergenic Intergenic 191737 NR_135560 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr8-6888 chr8 100995600 100995810 + 7.89 0.000 Intergenic Intergenic -42323 NM_003406 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr8-2575 chr8 42222215 42222425 + 7.89 0.000 Intergenic Intergenic -14755 NM_033011 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr15-2499 chr15 26032887 26033097 + 7.89 0.000 intron (NR_040082, intron 2 of 4) intron (NR_040082, intron 2 of 4) -82821 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr1-5059 chr1 95885668 95885878 + 7.89 0.000 Intergenic L1MD3|LINE|L1 -106295 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr8-4467 chr8 116926760 116926970 + 7.89 0.000 Intergenic Intergenic -11342 NM_001025357 441376 Hs.437551 NM_001025357 ENSG00000205002 AARD C8orf85 alanine and arginine rich domain containing protein protein-coding chr17-6405 chr17 1920122 1920332 + 7.89 0.000 Intergenic Intergenic 90222 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr8-7311 chr8 133086053 133086263 + 7.89 0.000 intron (NM_001045556, intron 1 of 8) L1MB7|LINE|L1 16444 NM_001282965 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr19-6350 chr19 11247097 11247307 + 7.89 0.000 intron (NM_001367830, intron 7 of 48) AluSx1|SINE|Alu 7583 NM_018687 55908 Hs.534467 NM_018687 ENSG00000130173 ANGPTL8 C19orf80|PRO1185|PVPA599|RIFL|TD26 angiopoietin like 8 protein-coding chr17-7900 chr17 43844643 43844853 + 7.89 0.000 Intergenic Intergenic -2428 NM_001168324 146894 Hs.147313 NM_145273 ENSG00000161649 CD300LG CLM-9|CLM9|NEPMUCIN|TREM-4|TREM4 CD300 molecule like family member g protein-coding chr10-6978 chr10 69303805 69304015 + 7.89 0.000 intron (NM_033500, intron 5 of 21) LTR8|LTR|ERV1 -11944 NM_033496 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr6-3865 chr6 44247514 44247724 + 7.89 0.000 promoter-TSS (NM_001371238) promoter-TSS (NM_001371238) -324 NM_001371238 chr19-3365 chr19 11062380 11062590 + 7.89 0.000 TTS (NM_001128844) TTS (NM_001128844) -26877 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr7-8379 chr7 44596289 44596499 + 7.89 0.000 Intergenic MER70B|LTR|ERVL -10233 NM_002541 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr11-2571 chr11 115148680 115148890 + 7.89 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -184792 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr12-4561 chr12 28507667 28507877 + 7.89 0.000 intron (NM_001352082, intron 13 of 13) LTR16|LTR|ERVL -317034 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr3-11014 chr3 181135124 181135334 + 7.89 0.000 intron (NR_075091, intron 2 of 7) intron (NR_075091, intron 2 of 7) -39915 NR_075093 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr2-8640 chr2 146034070 146034280 + 7.89 0.000 Intergenic L1ME3D|LINE|L1 -552882 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr4-6528 chr4 169432934 169433144 + 7.89 0.000 intron (NM_001199400, intron 26 of 32) AluSx1|SINE|Alu -162083 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr9-6464 chr9 89443084 89443294 + 7.89 0.000 intron (NM_001371200, intron 2 of 20) intron (NM_001371200, intron 2 of 20) 36701 NR_163888 chrX-1687 chrX 8907266 8907476 + 7.89 0.000 Intergenic Intergenic -105988 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr1-6024 chr1 62852500 62852710 + 7.89 0.000 intron (NM_178221, intron 10 of 10) HAL1|LINE|L1 68473 NM_032852 84938 Hs.7353 NM_032852 ENSG00000125703 ATG4C APG4-C|APG4C|AUTL1|AUTL3 autophagy related 4C cysteine peptidase protein-coding chr6-7631 chr6 79619874 79620084 + 7.89 0.000 Intergenic Intergenic -11350 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chr2-7019 chr2 149983528 149983738 + 7.89 0.000 Intergenic L1PA7|LINE|L1 -124442 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr1-6591 chr1 36733201 36733411 + 7.89 0.000 Intergenic MIRc|SINE|MIR -249992 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr12-8176 chr12 121950079 121950289 + 7.89 0.000 intron (NM_001178003, intron 8 of 17) L1MB5|LINE|L1 31592 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr17-7616 chr17 27632466 27632676 + 7.89 0.000 intron (NR_024043, intron 1 of 9) intron (NR_024043, intron 1 of 9) 1383 NM_002308 3965 Hs.81337 NM_002308 ENSG00000168961 LGALS9 HUAT|LGALS9A galectin 9 protein-coding chr20-1313 chr20 62254410 62254620 + 7.89 0.000 intron (NM_001363878, intron 1 of 14) intron (NM_001363878, intron 1 of 14) 15994 NM_001278649 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding chr2-8703 chr2 152891880 152892090 + 7.89 0.000 Intergenic L1ME3|LINE|L1 173348 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chrX-5237 chrX 136607933 136608143 + 7.89 0.000 Intergenic MER4E1|LTR|ERV1 -31505 NR_038461 100128420 Hs.152595 NR_038461 ENSG00000233093 LINC00892 - long intergenic non-protein coding RNA 892 ncRNA chr4-8468 chr4 156974278 156974488 + 7.89 0.000 Intergenic Intergenic -2584 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr15-5006 chr15 80983357 80983567 + 7.89 0.000 intron (NR_126327, intron 1 of 4) L1MC4a|LINE|L1 6357 NR_126327 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr6-7149 chr6 36427832 36428042 + 7.89 0.000 intron (NM_152990, intron 2 of 4) intron (NM_152990, intron 2 of 4) -14830 NM_001286580 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr5-3756 chr5 55172190 55172400 + 7.89 0.000 promoter-TSS (NR_031572) promoter-TSS (NR_031572) 58 NR_031572 100313923 NR_031572 ENSG00000251856 MIR449C mir-449c microRNA 449c ncRNA chr1-10240 chr1 116538844 116539054 + 7.89 0.000 intron (NM_001779, intron 2 of 5) MIR|SINE|MIR 21162 NR_039621 100616384 NR_039621 ENSG00000264419 MIR548AC - microRNA 548ac ncRNA chr10-3339 chr10 12907837 12908047 + 7.89 0.000 intron (NM_001282658, intron 6 of 6) intron (NM_001282658, intron 6 of 6) 93771 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr10-8144 chr10 70576903 70577113 + 7.89 0.000 Intergenic Intergenic 25733 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr8-4917 chr8 97915224 97915434 + 7.89 0.000 intron (NM_002380, intron 2 of 18) L2b|LINE|L2 46265 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr10-7270 chr10 128088880 128089090 + 7.89 0.000 Intergenic MIRb|SINE|MIR -26560 NR_136150 105378553 NR_136149 AS-PTPRE - lncRNA antisense to PTPRE protein-coding gene ncRNA chr5-1390 chr5 128083716 128083926 + 7.89 0.000 promoter-TSS (NR_046207) promoter-TSS (NR_046207) 55 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr4-7137 chr4 37462921 37463131 + 7.89 0.000 intron (NM_001104629, intron 1 of 3) MIR3|SINE|MIR 9101 NM_001104629 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr15-3748 chr15 60617967 60618177 + 7.89 0.000 intron (NM_002943, intron 1 of 10) intron (NM_002943, intron 1 of 10) 9458 NM_134260 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr18-2432 chr18 24737675 24737885 + 7.89 0.000 intron (NR_134604, intron 2 of 2) intron (NR_134604, intron 2 of 2) 11999 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chr1-14617 chr1 55369782 55369992 + 7.89 0.000 Intergenic Intergenic 144246 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr2-6109 chr2 203960876 203961086 + 7.89 0.000 3' UTR (NM_012092, exon 5 of 5) 3' UTR (NM_012092, exon 5 of 5) 24233 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr10-4314 chr10 19931489 19931699 + 7.89 0.000 intron (NM_032812, intron 1 of 13) intron (NM_032812, intron 1 of 13) 115162 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr4-2516 chr4 38319868 38320078 + 7.89 0.000 Intergenic Intergenic -46941 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr17-7392 chr17 8267132 8267342 + 7.89 0.000 intron (NM_012393, intron 24 of 27) intron (NM_012393, intron 24 of 27) 17948 NM_012393 5198 Hs.573976 NM_012393 ENSG00000178921 PFAS FGAMS|FGAR-AT|FGARAT|GATD8|PURL phosphoribosylformylglycinamidine synthase protein-coding chr5-5141 chr5 105414216 105414426 + 7.89 0.000 Intergenic L1PB1|LINE|L1 314847 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr14-2348 chr14 21317112 21317322 + 7.89 0.000 intron (NM_020366, intron 9 of 23) intron (NM_020366, intron 9 of 23) 29240 NM_020366 57096 Hs.126035 NM_020366 ENSG00000092200 RPGRIP1 CORD13|LCA6|RGI1|RGRIP|RPGRIP|RPGRIP1d RPGR interacting protein 1 protein-coding chr11-4837 chr11 14723521 14723731 + 7.89 0.000 intron (NM_000922, intron 1 of 15) AluJr4|SINE|Alu 79822 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr3-7772 chr3 71629173 71629383 + 7.89 0.000 Intergenic Intergenic -45289 NM_001244810 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr17-6631 chr17 64519326 64519536 + 7.89 0.000 non-coding (NR_133644, exon 6 of 20) non-coding (NR_133644, exon 6 of 20) 12454 NM_001316990 90799 Hs.569713 NM_138363 ENSG00000258890 CEP95 CCDC45 centrosomal protein 95 protein-coding chr13-4116 chr13 80420602 80420812 + 7.89 0.000 Intergenic Intergenic -79581 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr20-2482 chr20 32868715 32868925 + 7.89 0.000 intron (NM_001143967, intron 3 of 26) AluSz|SINE|Alu 9897 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr16-6878 chr16 84217317 84217527 + 7.89 0.000 Intergenic MIR3|SINE|MIR -20369 NR_147175 654780 Hs.8977 NM_001039504 ENSG00000250685 LOC654780 SFPQ splicing factor proline/glutamine-rich ncRNA chr10-6434 chr10 21754540 21754750 + 7.89 0.000 Intergenic Intergenic 220473 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr18-1431 chr18 13218928 13219138 + 7.89 0.000 intron (NM_181482, intron 1 of 5) CpG-12390 273 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chrX-708 chrX 97416643 97416853 + 7.89 0.000 intron (NM_007309, intron 25 of 26) intron (NM_007309, intron 25 of 26) 147787 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr14-4381 chr14 28134398 28134608 + 7.89 0.000 Intergenic L1PA13|LINE|L1 -461282 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chr4-8124 chr4 126777775 126777985 + 7.89 0.000 Intergenic Intergenic -855077 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr3-10744 chr3 155890910 155891120 + 7.89 0.000 intron (NM_003875, intron 1 of 15) Tigger6a|DNA|TcMar-Tigger 20365 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr14-1717 chr14 23381159 23381369 + 7.89 0.000 TTS (NM_002471) TTS (NM_002471) 4218 NM_001288745 116173 Hs.99272 NM_138460 ENSG00000166091 CMTM5 CKLFSF5 CKLF like MARVEL transmembrane domain containing 5 protein-coding chr6-3443 chr6 145067434 145067644 + 7.89 0.000 Intergenic Intergenic 619338 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr10-7852 chr10 46540144 46540354 + 7.89 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 15822 NM_014696 9721 Hs.523375 NM_014696 ENSG00000204175 GPRIN2 GRIN2|KIAA0514 G protein regulated inducer of neurite outgrowth 2 protein-coding chr7-9696 chr7 154987031 154987241 + 7.89 0.000 intron (NM_007349, intron 4 of 20) intron (NM_007349, intron 4 of 20) 15988 NM_007349 22976 Hs.443881 NM_007349 ENSG00000157212 PAXIP1 CAGF28|CAGF29|PACIP1|PAXIP1L|PTIP|TNRC2 PAX interacting protein 1 protein-coding chr15-1816 chr15 33600002 33600212 + 7.89 0.000 intron (NM_001243996, intron 16 of 102) intron (NM_001243996, intron 16 of 102) 289140 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr3-10503 chr3 136473842 136474052 + 7.89 0.000 intron (NM_005862, intron 10 of 33) intron (NM_005862, intron 10 of 33) 223607 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr9-3195 chr9 130452550 130452760 + 7.89 0.000 intron (NM_054012, intron 2 of 14) intron (NM_054012, intron 2 of 14) 7694 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr6-2492 chr6 99768569 99768779 + 7.89 0.000 Intergenic L1ME1|LINE|L1 161900 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr22-3396 chr22 35342003 35342213 + 7.89 0.000 intron (NR_156428, intron 11 of 13) FRAM|SINE|Alu -5309 NR_106717 102464824 NR_106717 ENSG00000274280 MIR6069 hsa-mir-6069 microRNA 6069 ncRNA chr8-5614 chr8 96578752 96578962 + 7.89 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -66385 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr8-2437 chr8 106206313 106206523 + 7.89 0.000 Intergenic Intergenic -63760 NM_001198533 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr18-2995 chr18 24481255 24481465 + 7.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR 20723 NM_021624 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr16-4678 chr16 79051292 79051502 + 7.89 0.000 intron (NM_001291997, intron 7 of 7) MLT1J1|LTR|ERVL-MaLR 549340 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr2-8679 chr2 149850292 149850502 + 7.89 0.000 intron (NR_145421, intron 2 of 4) intron (NR_145421, intron 2 of 4) 8794 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr13-3920 chr13 57604031 57604241 + 7.89 0.000 Intergenic MIR|SINE|MIR -27608 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr7-4090 chr7 30888713 30888923 + 7.89 0.000 intron (NR_037598, intron 19 of 19) intron (NR_037598, intron 19 of 19) -22876 NM_198098 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr12-1659 chr12 51394167 51394377 + 7.89 0.000 intron (NM_001258401, intron 1 of 24) intron (NM_001258401, intron 1 of 24) -2866 NM_007210 11226 Hs.505575 NM_007210 ENSG00000139629 GALNT6 GALNAC-T6|GalNAcT6 polypeptide N-acetylgalactosaminyltransferase 6 protein-coding chr17-5384 chr17 31842739 31842949 + 7.89 0.000 Intergenic Intergenic 16118 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr13-2932 chr13 23619811 23620021 + 7.89 0.000 intron (NM_001354985, intron 4 of 8) intron (NM_001354985, intron 4 of 8) 40556 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr2-6056 chr2 131156834 131157044 + 7.89 0.000 Intergenic Intergenic 52092 NM_001267064 55041 Hs.469944 NM_017958 ENSG00000115762 PLEKHB2 EVT2 pleckstrin homology domain containing B2 protein-coding chrX-5063 chrX 124001393 124001603 + 7.89 0.000 intron (NM_006603, intron 1 of 32) Tigger3b|DNA|TcMar-Tigger 39792 NM_001042751 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr9-6230 chr9 120617228 120617438 + 7.89 0.000 intron (NM_001080497, intron 3 of 5) intron (NM_001080497, intron 3 of 5) -37163 NM_001272039 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr3-7928 chr3 148433630 148433840 + 7.89 0.000 Intergenic Intergenic 152844 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr9-3831 chr9 129965099 129965309 + 7.89 0.000 intron (NM_001363755, intron 4 of 15) intron (NM_001363755, intron 4 of 15) 77985 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr5-7148 chr5 2662009 2662219 + 7.89 0.000 Intergenic Intergenic -50477 NR_145480 101234261 NR_145480 ENSG00000281560 LSINCT5 - long stress-induced non-coding transcript 5 ncRNA chr20-2986 chr20 38452258 38452468 + 7.89 0.000 Intergenic Intergenic 2994 NR_002986 677837 Hs.16936 NR_002986 ENSG00000199266 SNORA60 ACA60 small nucleolar RNA, H/ACA box 60 snoRNA chr12-3762 chr12 49951569 49951779 + 7.89 0.000 TTS (NR_110590) TTS (NR_110590) 933 NM_000486 359 Hs.130730 NM_000486 ENSG00000167580 AQP2 AQP-CD|WCH-CD aquaporin 2 protein-coding chr3-6508 chr3 113291826 113292036 + 7.89 0.000 intron (NM_001164496, intron 34 of 34) MamTip2|DNA|hAT-Tip100 79815 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr6-5240 chr6 136201074 136201284 + 7.89 0.000 Intergenic AluSz|SINE|Alu 49132 NM_001099286 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr9-4298 chr9 121489392 121489602 + 7.89 0.000 intron (NR_003191, intron 1 of 6) MER63B|DNA|hAT-Blackjack 10530 NR_045211 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr7-5161 chr7 6364976 6365186 + 7.89 0.000 Intergenic AluY|SINE|Alu -9446 NM_018890 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|MRD48|Rac-1|TC-25|p21-Rac1 Rac family small GTPase 1 protein-coding chr18-1687 chr18 78792160 78792370 + 7.89 0.000 Intergenic Intergenic -188010 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr18-2843 chr18 7465402 7465612 + 7.89 0.000 Intergenic MER1B|DNA|hAT-Charlie -4501 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr20-2222 chr20 62565649 62565859 + 7.89 0.000 TTS (NR_029676) TTS (NR_029676) 842 NR_029676 406923 NR_029676 ENSG00000284508 MIR133A2 MIRN133A2|mir-133a-2 microRNA 133a-2 ncRNA chr17-3310 chr17 63358094 63358304 + 7.89 0.000 intron (NM_025185, intron 13 of 25) intron (NM_025185, intron 13 of 25) 82068 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr9-7978 chr9 92645589 92645799 + 7.89 0.000 intron (NM_022755, intron 6 of 12) L1M4|LINE|L1 24437 NM_022755 64768 Hs.459896 NM_022755 ENSG00000127080 IPPK C9orf12|INSP5K2|IP5K|IPK1|bA476B13.1 inositol-pentakisphosphate 2-kinase protein-coding chr9-8349 chr9 116693472 116693682 + 7.89 0.000 intron (NM_001099679, intron 1 of 1) intron (NM_001099679, intron 1 of 1) 6272 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr5-4127 chr5 82061734 82061944 + 7.89 0.000 intron (NM_031482, intron 3 of 7) AluJr|SINE|Alu 89816 NM_031482 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding chr2-5072 chr2 9985086 9985296 + 7.89 0.000 intron (NM_198182, intron 8 of 15) intron (NM_198182, intron 8 of 15) 33498 NM_198182 29841 Hs.418493 NM_198182 ENSG00000134317 GRHL1 LBP32|MGR|NH32|TFCP2L2 grainyhead like transcription factor 1 protein-coding chr1-9231 chr1 22919405 22919615 + 7.89 0.000 3' UTR (NM_001309193, exon 17 of 17) 3' UTR (NM_001309193, exon 17 of 17) 53356 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr5-4790 chr5 56639224 56639434 + 7.89 0.000 Intergenic L2a|LINE|L2 -33073 NR_161255 101928448 Hs.208052 NM_001287053 ENSG00000225940 C5orf67 - chromosome 5 open reading frame 67 ncRNA chr11-6538 chr11 69804271 69804481 + 7.89 0.000 Intergenic Intergenic 15040 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr1-11312 chr1 20616648 20616858 + 7.89 0.000 intron (NM_001785, intron 3 of 3) intron (NM_001785, intron 3 of 3) -16705 NM_032409 65018 Hs.389171 NM_032409 ENSG00000158828 PINK1 BRPK|PARK6 PTEN induced kinase 1 protein-coding chrX-5288 chrX 141646729 141646939 + 7.89 0.000 intron (NR_037183, intron 3 of 3) intron (NR_037183, intron 3 of 3) 20970 NM_001318917 645188 Hs.679802 NM_001318917 LOC645188 SPANX-L uncharacterized LOC645188 protein-coding chr21-1632 chr21 21936088 21936298 + 7.89 0.000 Intergenic L1PB4|LINE|L1 162266 NR_109959 101927843 Hs.652879 NR_109959 ENSG00000233215 LINC01687 - long intergenic non-protein coding RNA 1687 ncRNA chr6-2380 chr6 141608085 141608295 + 7.89 0.000 Intergenic L1PBa|LINE|L1 480609 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chrX-2138 chrX 33158288 33158498 + 7.89 0.000 intron (NM_000109, intron 1 of 78) intron (NM_000109, intron 1 of 78) -29965 NM_004009 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr6-6144 chr6 168093827 168094037 + 7.89 0.000 Intergenic Intergenic -12375 NR_110312 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr1-15896 chr1 183674364 183674574 + 7.89 0.000 intron (NM_001297670, intron 1 of 17) intron (NM_001297670, intron 1 of 17) -21153 NM_203454 403314 Hs.97335 NM_203454 ENSG00000173627 APOBEC4 C1orf169 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 protein-coding chr12-2785 chr12 63064242 63064452 + 7.89 0.000 Intergenic Intergenic 88463 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr16-5776 chr16 88010191 88010401 + 7.89 0.000 intron (NM_001173539, intron 6 of 12) intron (NM_001173539, intron 6 of 12) 40278 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr9-6152 chr9 38672018 38672228 + 7.89 0.000 Intergenic Intergenic 51035 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr3-2793 chr3 3120320 3120530 + 7.89 0.000 Intergenic Intergenic -6515 NR_159938 51095 Hs.732725 NM_016000 ENSG00000072756 TRNT1 CCA1|CGI-47|MtCCA|RPEM|SIFD tRNA nucleotidyl transferase 1 protein-coding chrX-2155 chrX 35811737 35811947 + 7.89 0.000 Intergenic Intergenic 13088 NM_001370159 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr19-5493 chr19 43745416 43745626 + 7.89 0.000 intron (NM_019108, intron 5 of 13) intron (NM_019108, intron 5 of 13) 9441 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr14-2454 chr14 78029919 78030129 + 7.89 0.000 Intergenic Intergenic -140349 NR_073547 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr7-3038 chr7 101757045 101757255 + 7.89 0.000 Intergenic AluJr|SINE|Alu -58857 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr6-5219 chr6 134109151 134109361 + 7.89 0.000 Intergenic Intergenic 8424 NR_037938 387065 Hs.571061 NR_037938 HMGA1P7 HMGA1L7 high mobility group AT-hook 1 pseudogene 7 pseudo chr17-3761 chr17 31497426 31497636 + 7.89 0.000 intron (NM_001346748, intron 1 of 12) intron (NM_001346748, intron 1 of 12) 9423 NM_001303542 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr3-10814 chr3 162142730 162142940 + 7.89 0.000 Intergenic Intergenic 646027 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr2-10682 chr2 24509566 24509776 + 7.89 0.000 intron (NM_001362952, intron 1 of 23) intron (NM_001362952, intron 1 of 23) 17794 NM_001362952 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr2-8876 chr2 176901104 176901314 + 7.89 0.000 Intergenic MER20B|DNA|hAT-Charlie 263455 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr8-2457 chr8 126628628 126628838 + 7.89 0.000 Intergenic Intergenic -70255 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr15-3318 chr15 79452678 79452888 + 7.89 0.000 intron (NM_015206, intron 1 of 3) (TGTGTG)n|Simple_repeat|Simple_repeat 20267 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr7-3502 chr7 4964919 4965129 + 7.89 0.000 Intergenic AluSz|SINE|Alu -5837 NR_072989 221938 Hs.558694 NM_198403 ENSG00000136297 MMD2 PAQR10 monocyte to macrophage differentiation associated 2 protein-coding chr7-5151 chr7 6128259 6128469 + 7.89 0.000 intron (NM_032172, intron 3 of 17) FRAM|SINE|Alu 23415 NM_001365764 84132 Hs.31856 NM_032172 ENSG00000106346 USP42 - ubiquitin specific peptidase 42 protein-coding chr11-4974 chr11 69353016 69353226 + 7.89 0.000 Intergenic Intergenic 58966 NM_001293294 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr11-10122 chr11 88353986 88354196 + 7.89 0.000 Intergenic Intergenic -16355 NM_148170 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding chr5-3755 chr5 54226142 54226352 + 7.89 0.000 intron (NM_019087, intron 1 of 4) intron (NM_019087, intron 1 of 4) 84326 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr1-16596 chr1 236734333 236734543 + 7.89 0.000 exon (NM_001278343, exon 8 of 21) exon (NM_001278343, exon 8 of 21) 47939 NM_001278343 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr11-8772 chr11 9600544 9600754 + 7.89 0.000 Intergenic L2c|LINE|L2 25962 NM_001143976 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr5-8723 chr5 144357157 144357367 + 7.89 0.000 intron (NM_001370487, intron 2 of 2) MER91A|DNA|hAT-Tip100 151871 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr12-5991 chr12 96655218 96655428 + 7.89 0.000 intron (NM_001306084, intron 36 of 67) intron (NM_001306084, intron 36 of 67) 165746 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr8-3465 chr8 96766779 96766989 + 7.89 0.000 intron (NM_016134, intron 1 of 7) intron (NM_016134, intron 1 of 7) 121642 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr17-5926 chr17 75114236 75114446 + 7.89 0.000 3' UTR (NM_001304273, exon 3 of 3) 3' UTR (NM_001304273, exon 3 of 3) 4372 NM_001304272 79637 Hs.413047 NM_024585 ENSG00000125449 ARMC7 - armadillo repeat containing 7 protein-coding chr14-4742 chr14 61552866 61553076 + 7.89 0.000 Intergenic Intergenic 17223 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr4-7676 chr4 87279310 87279520 + 7.89 0.000 Intergenic Intergenic 21168 NR_049891 100847027 NR_049891 ENSG00000263981 MIR5705 - microRNA 5705 ncRNA chr15-3588 chr15 53836655 53836865 + 7.89 0.000 Intergenic LTR54|LTR|ERV1 -73882 NR_102334 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding GL000256.2-1 GL000256.2 4468150 4468360 + 7.89 0.000 NA NA NA NA chr11-2875 chr11 34633804 34634014 + 7.89 0.000 intron (NM_001206616, intron 1 of 8) intron (NM_001206616, intron 1 of 8) 1343 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr2-8738 chr2 159989357 159989567 + 7.89 0.000 intron (NM_001007267, intron 11 of 26) intron (NM_001007267, intron 11 of 26) 73153 NM_001007267 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr6-5031 chr6 111293294 111293504 + 7.89 0.000 Intergenic Intergenic 34060 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr7-4984 chr7 153667084 153667294 + 7.89 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -80944 NM_001364499 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr8-3203 chr8 120818864 120819074 + 7.89 0.000 Intergenic Intergenic -6923 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr17-2820 chr17 15946937 15947147 + 7.89 0.000 intron (NM_000676, intron 1 of 1) intron (NM_000676, intron 1 of 1) 2125 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr9-5144 chr9 37683096 37683306 + 7.89 0.000 intron (NM_001371223, intron 1 of 15) L1MB7|LINE|L1 15192 NM_001371223 chr6-5731 chr6 149545137 149545347 + 7.89 0.000 intron (NM_139126, intron 1 of 12) intron (NM_139126, intron 1 of 12) 801 NM_139126 85313 Hs.744238 NM_139126 ENSG00000131013 PPIL4 HDCME13P peptidylprolyl isomerase like 4 protein-coding chr1-13668 chr1 11444317 11444527 + 7.89 0.000 Intergenic Intergenic -34733 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr5-2869 chr5 82274310 82274520 + 7.89 0.000 3' UTR (NM_001025, exon 4 of 4) 3' UTR (NM_001025, exon 4 of 4) 3939 NM_001025 6228 Hs.527193 NM_001025 ENSG00000186468 RPS23 BTDD|MABAS|MCINS|PAMAS|S23|uS12 ribosomal protein S23 protein-coding chr2-12052 chr2 30632306 30632516 + 7.89 0.000 intron (NM_182551, intron 6 of 6) intron (NM_182551, intron 6 of 6) 175035 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr5-8779 chr5 148663356 148663566 + 7.89 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -8934 NR_104445 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr14-844 chr14 100214470 100214680 + 7.89 0.000 Intergenic CpG -24569 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr7-6061 chr7 113222219 113222429 + 7.89 0.000 Intergenic Intergenic -103742 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding chr1-16046 chr1 201404284 201404494 + 7.89 0.000 3' UTR (NM_003281, exon 8 of 8) 3' UTR (NM_003281, exon 8 of 8) -5065 NM_005558 3898 Hs.519035 NM_005558 ENSG00000159166 LAD1 LadA ladinin 1 protein-coding chr8-5147 chr8 78751669 78751879 + 7.89 0.000 intron (NM_001199886, intron 2 of 4) L1MA5|LINE|L1 -27400 NR_077236 101241902 Hs.388511 NR_077236 LOC101241902 - chromosome 4 open reading frame 46 pseudogene pseudo chr13-2890 chr13 112859859 112860069 + 7.89 0.000 intron (NM_032189, intron 23 of 28) intron (NM_032189, intron 23 of 28) -105233 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr15-5262 chr15 98878372 98878582 + 7.89 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 94051 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr21-1648 chr21 24941720 24941930 + 7.89 0.000 intron (NR_046198, intron 2 of 3) MER74A|LTR|ERVL 101275 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LINC01692 - long intergenic non-protein coding RNA 1692 ncRNA chr1-6125 chr1 158720480 158720690 + 7.89 0.000 Intergenic Intergenic -2470 NM_001005327 391114 Hs.554488 NM_001005327 ENSG00000203757 OR6K3 OR1-18 olfactory receptor family 6 subfamily K member 3 protein-coding chr6-2334 chr6 119348795 119349005 + 7.89 0.000 exon (NM_005907, exon 2 of 13) exon (NM_005907, exon 2 of 13) 861 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chrX-1267 chrX 106999020 106999230 + 7.89 0.000 intron (NM_001085354, intron 2 of 16) intron (NM_001085354, intron 2 of 16) 1087 NM_024657 79710 Hs.496544 NM_024657 ENSG00000133131 MORC4 ZCW4|ZCWCC2|dJ75H8.2 MORC family CW-type zinc finger 4 protein-coding chr9-4984 chr9 20568440 20568650 + 7.89 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) 53393 NM_001286691 4300 Hs.317248 NM_004529 ENSG00000171843 MLLT3 AF9|YEATS3 MLLT3 super elongation complex subunit protein-coding chr5-8534 chr5 134833352 134833562 + 7.89 0.000 Intergenic Intergenic -12223 NM_152409 134553 Hs.708536 NM_152409 ENSG00000181904 C5orf24 - chromosome 5 open reading frame 24 protein-coding chr10-7424 chr10 5558788 5558998 + 7.89 0.000 Intergenic Intergenic -32647 NR_120496 100132159 Hs.239600 NR_120496 CALML3-AS1 - CALML3 antisense RNA 1 ncRNA chr14-4387 chr14 28901673 28901883 + 7.89 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -115991 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr7-2344 chr7 1618460 1618670 + 7.89 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 4095 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr7-7203 chr7 15755331 15755541 + 7.89 0.000 Intergenic Intergenic 67058 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr3-8005 chr3 185378626 185378836 + 7.89 0.000 intron (NM_004721, intron 1 of 13) HERVH-int|LTR|ERV1 15595 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr2-5424 chr2 113747410 113747620 + 7.89 0.000 intron (NM_001330315, intron 4 of 16) L1M5|LINE|L1 9127 NM_001330317 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr7-5301 chr7 24854933 24855143 + 7.89 0.000 intron (NR_104111, intron 9 of 21) intron (NR_104111, intron 9 of 21) 37583 NM_145320 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr19-4103 chr19 16536209 16536419 + 7.89 0.000 intron (NM_006387, intron 2 of 16) intron (NM_006387, intron 2 of 16) 6123 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr6-4637 chr6 47669585 47669795 + 7.89 0.000 intron (NM_153839, intron 2 of 10) intron (NM_153839, intron 2 of 10) 13218 NM_153839 222611 Hs.724860 NM_153839 ENSG00000164393 ADGRF2 GPR111|PGR20|hGPCR35 adhesion G protein-coupled receptor F2 protein-coding chr15-3613 chr15 68212187 68212397 + 7.89 0.000 intron (NM_017882, intron 3 of 6) intron (NM_017882, intron 3 of 6) -6182 NR_104583 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr8-6175 chr8 33294482 33294692 + 7.89 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR 178559 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr11-5141 chr11 1363339 1363549 + 7.89 0.000 Intergenic ERVL-E-int|LTR|ERVL -26490 NR_046331 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr3-9877 chr3 81362693 81362903 + 7.89 0.000 Intergenic Intergenic 368930 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr14-4916 chr14 73504668 73504878 + 7.89 0.000 intron (NM_001220484, intron 10 of 17) intron (NM_001220484, intron 10 of 17) 13840 NM_024644 79697 Hs.509916 NM_024644 ENSG00000170468 RIOX1 C14orf169|JMJD9|MAPJD|NO66|ROX|URLC2|hsNO66 ribosomal oxygenase 1 protein-coding chr9-2019 chr9 135741081 135741291 + 7.89 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 39001 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr12-5101 chr12 96073447 96073657 + 7.89 0.000 Intergenic Intergenic -30032 NM_001256643 4048 Hs.524648 NM_000895 ENSG00000111144 LTA4H - leukotriene A4 hydrolase protein-coding chr5-3943 chr5 1213081 1213291 + 7.89 0.000 intron (NM_001003841, intron 4 of 11) intron (NM_001003841, intron 4 of 11) 11591 NM_001003841 340024 Hs.481478 NM_001003841 ENSG00000174358 SLC6A19 B0AT1|HND solute carrier family 6 member 19 protein-coding chr8-2988 chr8 100243393 100243603 + 7.89 0.000 Intergenic L2b|LINE|L2 58695 NM_001353837 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr10-4714 chr10 470670 470880 + 7.89 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -157789 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr10-5566 chr10 88993286 88993496 + 7.89 0.000 promoter-TSS (NR_028371) promoter-TSS (NR_028371) -416 NR_028371 100302740 Hs.244139 NR_028371 FAS-AS1 FAS-AS|FASAS|SAF FAS antisense RNA 1 ncRNA chr12-5681 chr12 100351061 100351271 + 7.89 0.000 Intergenic Intergenic -5908 NM_139319 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr1-15849 chr1 181208862 181209072 + 7.89 0.000 Intergenic Intergenic -27421 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr14-2979 chr14 51315650 51315860 + 7.89 0.000 intron (NR_145423, intron 1 of 1) intron (NR_145423, intron 1 of 1) 12630 NR_145423 161342 NR_145423 ENSG00000258955 LINC00519 C14orf30|c14_5317 long intergenic non-protein coding RNA 519 ncRNA chr8-4966 chr8 124039014 124039224 + 7.89 0.000 intron (NM_001039112, intron 19 of 40) intron (NM_001039112, intron 19 of 40) 1663 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr5-3333 chr5 133383466 133383676 + 7.89 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 44135 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr6-6399 chr6 82440610 82440820 + 7.89 0.000 Intergenic MER41B|LTR|ERV1 76471 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr8-7138 chr8 121314723 121314933 + 7.89 0.000 Intergenic Intergenic -324518 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr15-3717 chr15 50628480 50628690 + 7.89 0.000 intron (NR_149154, intron 10 of 37) AluJr|SINE|Alu 58212 NM_001301212 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr17-7010 chr17 52998397 52998607 + 7.89 0.000 Intergenic L1M1|LINE|L1 12997 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding chr9-8716 chr9 131704714 131704924 + 7.89 0.000 intron (NM_001304275, intron 1 of 23) (TGCC)n|Simple_repeat|Simple_repeat 5023 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr7-9280 chr7 125129184 125129394 + 7.89 0.000 intron (NR_125719, intron 6 of 7) L1MD1|LINE|L1 -55280 NR_110188 101928283 Hs.566650 NR_110188 ENSG00000224897 LOC101928283 - uncharacterized LOC101928283 ncRNA chr17-4364 chr17 17205419 17205629 + 7.89 0.000 intron (NM_178836, intron 1 of 1) CpG 809 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr4-4610 chr4 77433488 77433698 + 7.89 0.000 Intergenic Intergenic -78160 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr5-4827 chr5 61167539 61167749 + 7.89 0.000 intron (NR_109908, intron 1 of 3) intron (NR_109908, intron 1 of 3) -5176 NM_001048249 643155 Hs.508479 NM_001048249 ENSG00000188725 SMIM15 C5orf43 small integral membrane protein 15 protein-coding chr9-7636 chr9 40189602 40189812 + 7.89 0.000 Intergenic L1MC4a|LINE|L1 -33578 NM_001012421 441430 Hs.632663 NM_001012421 ENSG00000183148 ANKRD20A2 - ankyrin repeat domain 20 family member A2 protein-coding chr22-2917 chr22 46584770 46584980 + 7.89 0.000 intron (NM_001366660, intron 1 of 17) intron (NM_001366660, intron 1 of 17) 7787 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr9-6380 chr9 27470607 27470817 + 7.89 0.000 intron (NM_024761, intron 1 of 3) intron (NM_024761, intron 1 of 3) -53602 NM_020124 56832 Hs.591083 NM_020124 ENSG00000147896 IFNK IFNT1|INFE1 interferon kappa protein-coding chr6-5828 chr6 22737519 22737729 + 7.89 0.000 Intergenic Intergenic -19700 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chrX-1915 chrX 148682984 148683194 + 7.89 0.000 intron (NM_001169124, intron 3 of 19) intron (NM_001169124, intron 3 of 19) -36002 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr5-9043 chr5 169182154 169182364 + 7.89 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 81435 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr2-9731 chr2 68449059 68449269 + 7.89 0.000 Intergenic Intergenic 18130 NM_001024680 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding chr1-15950 chr1 190478416 190478626 + 7.89 0.000 promoter-TSS (NR_110717) promoter-TSS (NR_110717) -30 NR_110717 101929120 Hs.602301 NR_110716 LINC01351 - long intergenic non-protein coding RNA 1351 ncRNA chrX-702 chrX 74055763 74055973 + 7.89 0.000 intron (NR_028379, intron 5 of 6) intron (NR_028379, intron 5 of 6) 111544 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator ncRNA chr5-6638 chr5 43873182 43873392 + 7.89 0.000 Intergenic MER103C|DNA|hAT-Charlie -270057 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chrX-1767 chrX 65736681 65736891 + 7.89 0.000 intron (NM_002444, intron 8 of 12) intron (NM_002444, intron 8 of 12) 69132 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chrX-4217 chrX 37596311 37596521 + 7.89 0.000 intron (NM_198511, intron 1 of 5) intron (NM_198511, intron 1 of 5) 24755 NM_001170331 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chr12-4976 chr12 77270189 77270399 + 7.89 0.000 Intergenic Intergenic -204725 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr13-2524 chr13 60229974 60230184 + 7.89 0.000 intron (NR_047022, intron 1 of 2) intron (NR_047022, intron 1 of 2) 38025 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr12-4955 chr12 72272978 72273188 + 7.89 0.000 exon (NM_013381, exon 1 of 19) exon (NM_013381, exon 1 of 19) 334 NM_013381 29953 Hs.199814 NM_013381 ENSG00000072657 TRHDE PAP-II|PGPEP2|TRH-DE thyrotropin releasing hormone degrading enzyme protein-coding chr2-11247 chr2 171544416 171544626 + 7.89 0.000 intron (NM_001256909, intron 2 of 3) intron (NM_001256909, intron 2 of 3) 22047 NM_001127383 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr18-2443 chr18 30344610 30344820 + 7.89 0.000 Intergenic LTR16A2|LTR|ERVL 45805 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr11-5530 chr11 90806902 90807112 + 7.89 0.000 intron (NR_104190, intron 4 of 6) MSTA|LTR|ERVL-MaLR 62195 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr16-5030 chr16 55173895 55174105 + 7.89 0.000 Intergenic Intergenic -150559 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr22-4176 chr22 45476621 45476831 + 7.89 0.000 Intergenic AluJb|SINE|Alu -26157 NM_006486 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr19-6272 chr19 7751256 7751466 + 7.89 0.000 Intergenic THE1A|LTR|ERVL-MaLR -3827 NM_021155 30835 Hs.278694 NM_021155 ENSG00000090659 CD209 CDSIGN|CLEC4L|DC-SIGN|DC-SIGN1 CD209 molecule protein-coding chr7-7532 chr7 107109032 107109242 + 7.89 0.000 intron (NM_002736, intron 2 of 10) MER66D|LTR|ERV1 -59824 NM_001244262 26959 Hs.162032 NM_012257 ENSG00000105856 HBP1 - HMG-box transcription factor 1 protein-coding chr3-816 chr3 98837756 98837966 + 7.89 0.000 intron (NM_080927, intron 3 of 15) SVA_F|Retroposon|SVA 63834 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr3-6374 chr3 88654645 88654855 + 7.89 0.000 Intergenic L1PA3|LINE|L1 316294 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr17-5902 chr17 73582689 73582899 + 7.89 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 61651 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chr17-4764 chr17 43740121 43740331 + 7.89 0.000 Intergenic Intergenic 18565 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr9-7338 chr9 14596416 14596626 + 7.89 0.000 Intergenic Intergenic -64444 NM_001369468 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr11-3577 chr11 60193756 60193966 + 7.89 0.000 Intergenic Intergenic -9195 NM_001247999 64231 Hs.523702 NM_022349 ENSG00000110077 MS4A6A 4SPAN3|4SPAN3.2|CD20L3|CDA01|MS4A6|MST090|MSTP090 membrane spanning 4-domains A6A protein-coding chr7-3406 chr7 132738234 132738444 + 7.89 0.000 Intergenic Intergenic -20631 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr5-4260 chr5 138851013 138851223 + 7.89 0.000 intron (NM_001323985, intron 7 of 17) intron (NM_001323985, intron 7 of 17) -24112 NM_001324000 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr12-4078 chr12 54337854 54338064 + 7.89 0.000 TTS (NR_029894) TTS (NR_029894) 743 NR_029894 442892 NR_029894 ENSG00000199122 MIR148B MIRN148B|mir-148b microRNA 148b ncRNA chr11-5049 chr11 101824040 101824250 + 7.89 0.000 Intergenic Intergenic -90865 NM_001363543 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr19-6195 chr19 5481456 5481666 + 7.89 0.000 Intergenic Intergenic 26144 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr7-3140 chr7 65240020 65240230 + 7.89 0.000 Intergenic CpG 99095 NR_146906 285905 Hs.567827 NM_182596 ENSG00000164669 INTS4P1 INTS4L1 integrator complex subunit 4 pseudogene 1 pseudo chrX-1472 chrX 119565364 119565574 + 7.89 0.000 promoter-TSS (NM_001170569) promoter-TSS (NM_001170569) -60 NM_022101 63932 Hs.248572 NM_022101 ENSG00000018610 CXorf56 MRX107 chromosome X open reading frame 56 protein-coding chr1-12963 chr1 153699400 153699610 + 7.89 0.000 Intergenic MIR|SINE|MIR -9712 NR_107050 102466879 NR_107050 ENSG00000274940 MIR8083 hsa-mir-8083 microRNA 8083 ncRNA chr5-7833 chr5 68268715 68268925 + 7.89 0.000 intron (NM_181523, intron 2 of 15) intron (NM_181523, intron 2 of 15) -19699 NM_181524 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr4-5246 chr4 169758329 169758539 + 7.89 0.000 promoter-TSS (NM_017867) promoter-TSS (NM_017867) -490 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr5-3143 chr5 62166761 62166971 + 7.89 0.000 Intergenic Intergenic -139296 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr12-3380 chr12 100567978 100568188 + 7.89 0.000 Intergenic LTR33A_|LTR|ERVL -5601 NM_001363672 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr22-3131 chr22 21678411 21678621 + 7.89 0.000 intron (NM_148175, intron 6 of 20) AluJb|SINE|Alu 12504 NM_148175 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr5-3937 chr5 354360 354570 + 7.89 0.000 intron (NM_020731, intron 3 of 11) intron (NM_020731, intron 3 of 11) 50289 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chrX-4650 chrX 80118936 80119146 + 7.89 0.000 Intergenic Intergenic 95981 NM_001303475 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr7-3939 chr7 129524521 129524731 + 7.89 0.000 Intergenic AluJb|SINE|Alu 22095 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr2-10042 chr2 31126321 31126531 + 7.89 0.000 intron (NM_001329096, intron 1 of 16) MIRb|SINE|MIR 3214 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr11-7889 chr11 126102750 126102960 + 7.89 0.000 Intergenic L2b|LINE|L2 -39563 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr1-16714 chr1 247275272 247275482 + 7.89 0.000 Intergenic AluSz|SINE|Alu 19305 NM_173858 317705 Hs.553686 NM_173858 ENSG00000197617 VN1R5 V1RL5 vomeronasal 1 receptor 5 (gene/pseudogene) protein-coding chr7-8927 chr7 95472106 95472316 + 7.89 0.000 Intergenic Intergenic -13690 NM_145872 51666 Hs.602765 NM_016116 ENSG00000005981 ASB4 ASB-4 ankyrin repeat and SOCS box containing 4 protein-coding chr5-8445 chr5 129436503 129436713 + 7.89 0.000 Intergenic Intergenic -23690 NM_133638 171019 Hs.23751 NM_133638 ENSG00000145808 ADAMTS19 - ADAM metallopeptidase with thrombospondin type 1 motif 19 protein-coding chr4-8490 chr4 159615198 159615408 + 7.89 0.000 Intergenic L1PA5|LINE|L1 162481 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr16-3406 chr16 83805737 83805947 + 7.89 0.000 Intergenic Intergenic -1866 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr11-7610 chr11 45756552 45756762 + 7.89 0.000 Intergenic Intergenic -14775 NR_027134 374387 Hs.632142 NM_199137 ENSG00000205106 LINC02716 DKFZp779M0652 long intergenic non-protein coding RNA 2716 ncRNA chr1-14558 chr1 52741261 52741471 + 7.89 0.000 intron (NM_024646, intron 1 of 13) intron (NM_024646, intron 1 of 13) 14913 NM_024646 79699 Hs.476280 NM_024646 ENSG00000162378 ZYG11B ZYG11 zyg-11 family member B, cell cycle regulator protein-coding chr12-7655 chr12 83261952 83262162 + 7.89 0.000 Intergenic Intergenic 574902 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr1-15796 chr1 176616295 176616505 + 7.89 0.000 intron (NM_021936, intron 3 of 4) intron (NM_021936, intron 3 of 4) 153225 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr2-3629 chr2 127175066 127175276 + 7.89 0.000 Intergenic Intergenic 30596 NM_001001665 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr5-1743 chr5 176597331 176597541 + 7.89 0.000 exon (NM_052899, exon 2 of 2) exon (NM_052899, exon 2 of 2) 12720 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr2-7756 chr2 38919604 38919814 + 7.89 0.000 intron (NM_001145451, intron 1 of 15) intron (NM_001145451, intron 1 of 15) 346 NM_001145451 100271715 Hs.99841 NM_001145451 ENSG00000214694 ARHGEF33 - Rho guanine nucleotide exchange factor 33 protein-coding chr3-10870 chr3 169287879 169288089 + 7.89 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -140513 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr1-12012 chr1 97758928 97759138 + 7.89 0.000 intron (NM_000110, intron 3 of 22) intron (NM_000110, intron 3 of 22) -37888 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr3-7278 chr3 197795231 197795441 + 7.89 0.000 intron (NM_001365717, intron 1 of 19) MLT1K|LTR|ERVL-MaLR 4082 NM_001365715 84859 Hs.518414 NM_032773 ENSG00000186001 LRCH3 - leucine rich repeats and calponin homology domain containing 3 protein-coding chr3-8221 chr3 47323310 47323520 + 7.89 0.000 intron (NM_025010, intron 3 of 9) intron (NM_025010, intron 3 of 9) 40471 NM_025010 23276 Hs.517946 NM_025010 ENSG00000114648 KLHL18 - kelch like family member 18 protein-coding chr1-9673 chr1 48977402 48977612 + 7.89 0.000 intron (NM_001323575, intron 5 of 12) ERVL-E-int|LTR|ERVL -200538 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr4-7803 chr4 98377701 98377911 + 7.89 0.000 intron (NM_001100430, intron 4 of 12) intron (NM_001100430, intron 4 of 12) 116422 NM_001100426 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding chr3-3933 chr3 49708060 49708270 + 7.89 0.000 intron (NM_022064, intron 26 of 38) AluSx|SINE|Alu 11519 NM_198722 386724 Hs.567903 NM_198722 ENSG00000176020 AMIGO3 ALI3|AMIGO-3 adhesion molecule with Ig like domain 3 protein-coding chr20-3784 chr20 21465861 21466071 + 7.89 0.000 Intergenic Intergenic 48098 NM_002509 4821 Hs.516922 NM_002509 ENSG00000125820 NKX2-2 NKX2.2|NKX2B NK2 homeobox 2 protein-coding chr10-6268 chr10 80031479 80031689 + 7.89 0.000 Intergenic Intergenic -47062 NM_001270372 80195 Hs.169982 NM_025125 ENSG00000133678 TMEM254 C10orf57|bA369J21.6 transmembrane protein 254 protein-coding chr8-3512 chr8 114601713 114601923 + 7.89 0.000 Intergenic L1MD2|LINE|L1 1066195 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr3-8908 chr3 12798422 12798632 + 7.89 0.000 intron (NM_001162499, intron 1 of 14) MIRb|SINE|MIR 1847 NM_012298 23066 Hs.343664 NM_012298 ENSG00000144712 CAND2 TIP120B|Tp120b cullin associated and neddylation dissociated 2 (putative) protein-coding chr5-2173 chr5 126869378 126869588 + 7.89 0.000 3' UTR (NM_178450, exon 5 of 5) 3' UTR (NM_178450, exon 5 of 5) 92347 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr6-2505 chr6 137237454 137237664 + 7.89 0.000 Intergenic Intergenic -18129 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr15-3101 chr15 64401273 64401483 + 7.89 0.000 intron (NM_001321924, intron 5 of 12) AluSc8|SINE|Alu 13542 NM_001321924 9325 Hs.500340 NM_016213 ENSG00000103671 TRIP4 ASC-1|ASC1|HsT17391|MDCDC|SMABF1|ZC2HC5 thyroid hormone receptor interactor 4 protein-coding chr10-2268 chr10 129568943 129569153 + 7.89 0.000 intron (NM_002412, intron 2 of 4) intron (NM_002412, intron 2 of 4) 101807 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr8-4340 chr8 100397994 100398204 + 7.89 0.000 Intergenic Intergenic 15336 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr2-11211 chr2 160014200 160014410 + 7.89 0.000 intron (NM_001007267, intron 9 of 26) intron (NM_001007267, intron 9 of 26) 48310 NM_001007267 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chrX-1758 chrX 54183396 54183606 + 7.89 0.000 promoter-TSS (NM_017848) promoter-TSS (NM_017848) -247 NM_001300788 54954 Hs.86045 NM_017848 ENSG00000184083 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding chr19-2410 chr19 19341810 19342020 + 7.89 0.000 intron (NM_015329, intron 7 of 18) intron (NM_015329, intron 7 of 18) 21086 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chr19-4223 chr19 47875845 47876055 + 7.89 0.000 intron (NM_003167, intron 4 of 5) intron (NM_003167, intron 4 of 5) 10365 NM_003167 6822 Hs.515835 NM_003167 ENSG00000105398 SULT2A1 DHEA-ST|DHEAS|HST|ST2|ST2A1|ST2A3|STD|hSTa sulfotransferase family 2A member 1 protein-coding chr3-7756 chr3 64144063 64144273 + 7.89 0.000 intron (NM_001370528, intron 7 of 7) MER102c|DNA|hAT-Charlie 40698 NR_046701 100874242 Hs.668874 NR_046701 PRICKLE2-AS2 - PRICKLE2 antisense RNA 2 ncRNA chr12-3670 chr12 121711819 121712029 + 7.89 0.000 promoter-TSS (NM_001080825) promoter-TSS (NM_001080825) -828 NM_001080825 144404 Hs.644504 NM_001080825 ENSG00000188735 TMEM120B - transmembrane protein 120B protein-coding chr14-2728 chr14 95828873 95829083 + 7.89 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -47414 NR_132399 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr16-3153 chr16 75415376 75415586 + 7.89 0.000 intron (NM_006324, intron 1 of 6) L1ME3A|LINE|L1 18022 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr9-7656 chr9 68825602 68825812 + 7.89 0.000 intron (NM_003558, intron 4 of 15) intron (NM_003558, intron 4 of 15) 45642 NM_138333 116224 Hs.655572 NM_138333 ENSG00000187866 FAM122A C9orf42 family with sequence similarity 122A protein-coding chr8-3741 chr8 22298582 22298792 + 7.89 0.000 intron (NM_001330480, intron 10 of 21) intron (NM_001330480, intron 10 of 21) 23120 NM_001135721 55124 Hs.614809 NM_018068 ENSG00000197181 PIWIL2 CT80|HILI|PIWIL1L|mili piwi like RNA-mediated gene silencing 2 protein-coding chr17-5619 chr17 49039751 49039961 + 7.89 0.000 intron (NM_006546, intron 6 of 14) intron (NM_006546, intron 6 of 14) 42471 NM_001160423 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chr17-8097 chr17 55939646 55939856 + 7.89 0.000 Intergenic L1PA8|LINE|L1 188646 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr1-10159 chr1 109816404 109816614 + 7.89 0.000 Intergenic Intergenic -52586 NM_001319952 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr18-3267 chr18 50908410 50908620 + 7.89 0.000 intron (NM_002396, intron 3 of 15) L2c|LINE|L2 29397 NM_001168335 4200 Hs.233119 NM_002396 ENSG00000082212 ME2 ODS1 malic enzyme 2 protein-coding chr7-8254 chr7 36119497 36119707 + 7.89 0.000 Intergenic L1ME3A|LINE|L1 24292 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr18-1413 chr18 2908626 2908836 + 7.89 0.000 intron (NM_032048, intron 5 of 7) intron (NM_032048, intron 5 of 7) 37892 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo chr1-12237 chr1 214898875 214899085 + 7.89 0.000 Intergenic Intergenic -106562 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr13-3363 chr13 77751152 77751362 + 7.89 0.000 intron (NM_001242868, intron 4 of 6) MER106B|DNA|hAT-Charlie 10038 NM_001366666 122060 Hs.349955 NM_144595 ENSG00000139737 SLAIN1 C13orf32 SLAIN motif family member 1 protein-coding chr3-7574 chr3 4515244 4515454 + 7.89 0.000 intron (NM_001168272, intron 2 of 60) intron (NM_001168272, intron 2 of 60) 22001 NM_002222 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr7-6139 chr7 123905919 123906129 + 7.89 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -19217 NM_003117 6677 Hs.121494 NM_003117 ENSG00000106304 SPAM1 HEL-S-96n|HYA1|HYAL1|HYAL3|HYAL5|PH-20|PH20|SPAG15 sperm adhesion molecule 1 protein-coding chr14-3518 chr14 103450594 103450804 + 7.89 0.000 intron (NM_001128920, intron 4 of 15) intron (NM_001128920, intron 4 of 15) 65284 NM_001128918 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr16-3581 chr16 69100736 69100946 + 7.89 0.000 Intergenic Intergenic -4812 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr20-2158 chr20 40120770 40120980 + 7.89 0.000 Intergenic Intergenic 116414 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr9-7412 chr9 21473682 21473892 + 7.89 0.000 intron (NR_152878, intron 2 of 2) intron (NR_152878, intron 2 of 2) 8526 NM_176891 338376 Hs.682604 NM_176891 ENSG00000184995 IFNE IFN-E|IFNE1|IFNT1|INFE1|PRO655 interferon epsilon protein-coding chr2-5527 chr2 152926030 152926240 + 7.89 0.000 Intergenic LTR50|LTR|ERVL 207498 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr2-12395 chr2 54528856 54529066 + 7.89 0.000 promoter-TSS (NR_002229) promoter-TSS (NR_002229) -261 NR_002229 56969 Hs.657366 NM_020217 RPL23AP32 RPL23A_9_220 ribosomal protein L23a pseudogene 32 pseudo chr16-4976 chr16 3374591 3374801 + 7.89 0.000 Intergenic Intergenic -2028 NM_001190476 100463285 NM_001190476 ENSG00000232196 MTRNR2L4 HN4 MT-RNR2 like 4 protein-coding chr20-2913 chr20 63767743 63767953 + 7.89 0.000 intron (NM_001369741, intron 3 of 4) intron (NM_001369741, intron 3 of 4) 28072 NM_020062 56731 Hs.435126 NM_020062 ENSG00000125520 SLC2A4RG GEF|HDBP-1|HDBP1|Si-1-2|Si-1-2-19 SLC2A4 regulator protein-coding chr1-7975 chr1 202058301 202058511 + 7.89 0.000 Intergenic L3|LINE|CR1 47819 NM_001114309 1999 Hs.603657 NM_004433 ENSG00000163435 ELF3 EPR-1|ERT|ESE-1|ESX E74 like ETS transcription factor 3 protein-coding chr5-5337 chr5 130515004 130515214 + 7.89 0.000 Intergenic L1P4a|LINE|L1 610644 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr8-2521 chr8 22548090 22548300 + 7.89 0.000 Intergenic Intergenic -3732 NM_005775 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr3-10797 chr3 160027703 160027913 + 7.89 0.000 intron (NR_104132, intron 2 of 2) AluJb|SINE|Alu 7159 NR_104132 730109 Hs.99333 NR_104132 LINC01100 - long intergenic non-protein coding RNA 1100 ncRNA chr12-1422 chr12 53252250 53252460 + 7.89 0.000 intron (NM_032889, intron 1 of 1) intron (NM_032889, intron 1 of 1) 260 NM_032889 84975 Hs.654660 NM_032889 ENSG00000182544 MFSD5 hsMOT2 major facilitator superfamily domain containing 5 protein-coding chr11-2485 chr11 65234527 65234737 + 7.89 0.000 intron (NR_033396, intron 7 of 9) AluSz|SINE|Alu 20792 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr16-2682 chr16 74521657 74521867 + 7.89 0.000 intron (NM_001145666, intron 1 of 25) LTR87|LTR|ERVL? 85352 NM_012201 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr19-3451 chr19 29740918 29741128 + 7.89 0.000 Intergenic L2|LINE|L2 -25234 NM_001256047 83636 Hs.529094 NM_031448 ENSG00000131943 C19orf12 MPAN|NBIA3|NBIA4|SPG43 chromosome 19 open reading frame 12 protein-coding chr2-9886 chr2 215737103 215737313 + 7.89 0.000 intron (NR_037195, intron 5 of 9) intron (NR_037195, intron 5 of 9) 19165 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr9-6149 chr9 37949603 37949813 + 7.89 0.000 intron (NM_003028, intron 4 of 5) intron (NM_003028, intron 4 of 5) -45355 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr1-8882 chr1 5114866 5115076 + 7.89 0.000 Intergenic HERVH-int|LTR|ERV1 460362 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr15-1487 chr15 40316069 40316279 + 7.89 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -7518 NM_001301268 100505573 Hs.530791 NM_001301268 ENSG00000259330 INAFM2 LINC00984|OGU1 InaF motif containing 2 protein-coding chr16-3044 chr16 54701974 54702184 + 7.89 0.000 Intergenic Intergenic 146154 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr8-4438 chr8 111559903 111560113 + 7.89 0.000 Intergenic Intergenic 183369 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr1-10554 chr1 172048769 172048979 + 7.89 0.000 intron (NM_001278252, intron 10 of 14) intron (NM_001278252, intron 10 of 14) -89934 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA chr3-7236 chr3 194986216 194986426 + 7.89 0.000 Intergenic Intergenic -108267 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr15-3266 chr15 76507683 76507893 + 7.89 0.000 intron (NR_148227, intron 23 of 32) intron (NR_148227, intron 23 of 32) -78859 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr3-6957 chr3 162605839 162606049 + 7.89 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 697357 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr12-6076 chr12 120602860 120603070 + 7.89 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -21563 NM_015918 51367 Hs.279913 NM_015918 ENSG00000167272 POP5 HSPC004|RPP2|RPP20|hPop5 POP5 homolog, ribonuclease P/MRP subunit protein-coding chr18-3274 chr18 51526484 51526694 + 7.89 0.000 intron (NR_040074, intron 1 of 2) intron (NR_040074, intron 1 of 2) 134547 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr20-1608 chr20 9127783 9127993 + 7.89 0.000 intron (NM_001172646, intron 1 of 37) AluSx1|SINE|Alu 58834 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr4-2226 chr4 145265482 145265692 + 7.89 0.000 Intergenic Intergenic 74832 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr6-4855 chr6 87002569 87002779 + 7.89 0.000 intron (NM_000865, intron 1 of 1) LTR12|LTR|ERV1 65146 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chrX-2303 chrX 53648893 53649103 + 7.89 0.000 intron (NM_031407, intron 4 of 83) A-rich|Low_complexity|Low_complexity 37721 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr2-10729 chr2 30437238 30437448 + 7.89 0.000 Intergenic Intergenic -9903 NM_001002257 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr3-4879 chr3 172552298 172552508 + 7.89 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -28973 NM_001190943 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL TNF superfamily member 10 protein-coding chr3-9512 chr3 51581999 51582209 + 7.89 0.000 intron (NM_001322253, intron 3 of 23) AluJr4|SINE|Alu 40515 NM_001322257 23132 Hs.105399 NM_015106 ENSG00000164080 RAD54L2 ARIP4|HSPC325|SRISNF2L RAD54 like 2 protein-coding chr4-4779 chr4 100823189 100823399 + 7.89 0.000 Intergenic Intergenic -148181 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr4-7635 chr4 83454730 83454940 + 7.89 0.000 intron (NM_001297758, intron 1 of 1) intron (NM_001297758, intron 1 of 1) 988 NM_133636 113510 Hs.480101 NM_133636 ENSG00000163312 HELQ HEL308 helicase, POLQ like protein-coding chr4-5377 chr4 187945812 187946022 + 7.89 0.000 Intergenic Intergenic -49854 NM_174900 132625 Hs.335787 NM_174900 ENSG00000179059 ZFP42 REX-1|REX1|ZNF754|zfp-42 ZFP42 zinc finger protein protein-coding chrX-4797 chrX 99748022 99748232 + 7.89 0.000 Intergenic L3|LINE|CR1 662146 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr2-4765 chr2 26454878 26455088 + 7.89 0.000 intron (NM_145038, intron 15 of 16) intron (NM_145038, intron 15 of 16) 23141 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr14-1890 chr14 96206022 96206232 + 7.89 0.000 intron (NM_000623, intron 1 of 2) intron (NM_000623, intron 1 of 2) 1329 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr1-11169 chr1 239649180 239649390 + 7.89 0.000 intron (NM_001347716, intron 4 of 7) MLT1A0|LTR|ERVL-MaLR 20212 NM_000740 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr20-2484 chr20 32889430 32889640 + 7.89 0.000 intron (NM_001143967, intron 7 of 26) intron (NM_001143967, intron 7 of 26) 30612 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr16-4509 chr16 58205726 58205936 + 7.89 0.000 Intergenic Intergenic -7725 NM_001896 1459 Hs.82201 NM_001896 ENSG00000070770 CSNK2A2 CK2A2|CK2alpha'|CSNK2A1 casein kinase 2 alpha 2 protein-coding chr19-6691 chr19 35554839 35555049 + 7.89 0.000 exon (NM_000704, exon 16 of 22) exon (NM_000704, exon 16 of 22) 8714 NM_000704 495 Hs.36992 NM_000704 ENSG00000105675 ATP4A ATP6A ATPase H+/K+ transporting subunit alpha protein-coding chr16-758 chr16 58198061 58198271 + 7.89 0.000 promoter-TSS (NM_001896) promoter-TSS (NM_001896) -60 NM_001896 1459 Hs.82201 NM_001896 ENSG00000070770 CSNK2A2 CK2A2|CK2alpha'|CSNK2A1 casein kinase 2 alpha 2 protein-coding chr4-5554 chr4 137771494 137771704 + 7.89 0.000 Intergenic Intergenic 225868 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr13-2412 chr13 44068182 44068392 + 7.89 0.000 Intergenic MIR|SINE|MIR -42262 NR_104065 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr9-7535 chr9 34587761 34587971 + 7.89 0.000 intron (NM_001207011, intron 1 of 9) intron (NM_001207011, intron 1 of 9) 1858 NM_001842 1271 Hs.129966 NM_001842 ENSG00000122756 CNTFR - ciliary neurotrophic factor receptor protein-coding chrX-2121 chrX 28235340 28235550 + 7.89 0.000 Intergenic LTR33A|LTR|ERVL -253996 NM_001017930 139425 Hs.447365 NM_001017930 ENSG00000226372 DCAF8L1 WDR42B DDB1 and CUL4 associated factor 8 like 1 protein-coding chr1-9753 chr1 54608948 54609158 + 7.89 0.000 TTS (NM_176782) TTS (NM_176782) 14472 NM_176782 338094 Hs.234786 NM_176782 ENSG00000162391 FAM151A C1orf179 family with sequence similarity 151 member A protein-coding chr12-7677 chr12 87596752 87596962 + 7.89 0.000 Intergenic Intergenic -171955 NR_149056 110806294 Hs.615803 NR_149056 LINC02258 - long intergenic non-protein coding RNA 2258 ncRNA chr20-3126 chr20 34252338 34252548 + 7.89 0.000 Intergenic LTR5B|LTR|ERVK -7922 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chrX-2942 chrX 153922097 153922307 + 7.89 0.000 intron (NM_001666, intron 1 of 21) intron (NM_001666, intron 1 of 21) 4062 NM_001666 393 Hs.701324 NM_001666 ENSG00000089820 ARHGAP4 C1|RGC1|RhoGAP4|SrGAP4|p115 Rho GTPase activating protein 4 protein-coding chr18-3545 chr18 76564111 76564321 + 7.89 0.000 Intergenic Intergenic 35561 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chr13-2689 chr13 89806835 89807045 + 7.89 0.000 Intergenic L1PA10|LINE|L1 -242527 NR_046991 100874139 Hs.742173 NR_046991 LINC00353 - long intergenic non-protein coding RNA 353 ncRNA chr14-5301 chr14 101136826 101137036 + 7.89 0.000 Intergenic MER89|LTR|ERV1 16075 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr6-3046 chr6 58249289 58249499 + 7.89 0.000 Intergenic SATR1|Satellite|Satellite -287948 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr6-7492 chr6 62868236 62868446 + 7.89 0.000 Intergenic SATR1|Satellite|Satellite 451636 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr10-4592 chr10 112190876 112191086 + 7.89 0.000 Intergenic Intergenic -7216 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr1-7295 chr1 241891124 241891334 + 7.89 0.000 Intergenic HAL1M8|LINE|L1 42498 NM_006027 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr10-7598 chr10 19922333 19922543 + 7.89 0.000 intron (NM_032812, intron 1 of 13) intron (NM_032812, intron 1 of 13) 106006 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr9-4689 chr9 124621141 124621351 + 7.89 0.000 intron (NM_033334, intron 2 of 9) intron (NM_033334, intron 2 of 9) -37190 NR_038975 100379345 Hs.660412 NR_038975 ENSG00000224020 MIR181A2HG - MIR181A2 host gene ncRNA chr4-4988 chr4 135274449 135274659 + 7.89 0.000 Intergenic Intergenic -150995 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr15-3737 chr15 58243358 58243568 + 7.89 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 105082 NM_001320635 366 Hs.104624 NM_020980 ENSG00000103569 AQP9 AQP-9|HsT17287|SSC1|T17287 aquaporin 9 protein-coding chr11-3194 chr11 65241522 65241732 + 7.89 0.000 intron (NR_033396, intron 9 of 9) intron (NR_033396, intron 9 of 9) -20335 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr8-6865 chr8 100384489 100384699 + 7.89 0.000 Intergenic Intergenic 1831 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr20-4399 chr20 58507057 58507267 + 7.89 0.000 intron (NR_130908, intron 1 of 1) THE1B|LTR|ERVL-MaLR 7776 NR_130908 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding chr1-13656 chr1 10955283 10955493 + 7.89 0.000 intron (NM_001366227, intron 6 of 10) intron (NM_001366227, intron 6 of 10) 11299 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr8-3592 chr8 138724982 138725192 + 7.89 0.000 intron (NM_152888, intron 24 of 64) intron (NM_152888, intron 24 of 64) 188954 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chrX-3458 chrX 25811722 25811932 + 7.89 0.000 Intergenic L2c|LINE|L2 -326516 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr16-2904 chr16 1026681 1026891 + 7.89 0.000 Intergenic Intergenic 45016 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr17-4295 chr17 77675593 77675803 + 7.89 0.000 Intergenic Intergenic 52861 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr7-3172 chr7 99424176 99424386 + 7.89 0.000 intron (NM_001198879, intron 7 of 8) intron (NM_001198879, intron 7 of 8) 14517 NM_015545 26024 Hs.632313 NM_015545 ENSG00000106246 PTCD1 - pentatricopeptide repeat domain 1 protein-coding chr17-1295 chr17 40818790 40819000 + 7.89 0.000 promoter-TSS (NR_160888) promoter-TSS (NR_160888) -250 NR_160887 147184 Hs.353163 NM_145274 ENSG00000167920 TMEM99 - transmembrane protein 99 (putative) ncRNA chr4-6575 chr4 188223993 188224203 + 7.89 0.000 Intergenic BLACKJACK|DNA|hAT-Blackjack 84657 NM_178556 339976 Hs.348618 NM_178556 ENSG00000184108 TRIML1 RNF209 tripartite motif family like 1 protein-coding chr7-8615 chr7 68359056 68359266 + 7.89 0.000 Intergenic AluSz|SINE|Alu 338908 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr8-5678 chr8 119947823 119948033 + 7.89 0.000 intron (NM_022783, intron 3 of 8) intron (NM_022783, intron 3 of 8) 74206 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr11-10035 chr11 82681317 82681527 + 7.89 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 52442 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr5-7417 chr5 27806153 27806363 + 7.89 0.000 Intergenic L1MCb|LINE|L1 333966 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr16-2025 chr16 12703418 12703628 + 7.89 0.000 intron (NM_001099455, intron 2 of 2) AluSz|SINE|Alu -16798 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr5-2441 chr5 129426768 129426978 + 7.89 0.000 Intergenic Intergenic -29726 NR_039665 100616325 NR_039665 ENSG00000265691 MIR4460 - microRNA 4460 ncRNA chr1-14379 chr1 43525248 43525458 + 7.89 0.000 promoter-TSS (NM_001329138) promoter-TSS (NM_001329138) -684 NM_001329138 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr21-705 chr21 31872937 31873147 + 7.89 0.000 promoter-TSS (NM_014586) promoter-TSS (NM_014586) 22 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr5-6195 chr5 62178348 62178558 + 7.89 0.000 Intergenic AluJb|SINE|Alu -127709 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr11-5301 chr11 45584316 45584526 + 7.89 0.000 Intergenic Intergenic 81201 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr15-1322 chr15 78492781 78492991 + 7.89 0.000 intron (NM_001354994, intron 18 of 21) L1MC5|LINE|L1 -14678 NM_001083612 123688 Hs.307962 NM_001013619 ENSG00000188266 HYKK AGPHD1 hydroxylysine kinase protein-coding chr17-7168 chr17 79322690 79322900 + 7.89 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 193353 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr15-3881 chr15 93486526 93486736 + 7.89 0.000 Intergenic Intergenic 280565 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr1-4514 chr1 32241022 32241232 + 7.89 0.000 intron (NR_026850, intron 1 of 6) CpG 583 NR_026850 339483 Hs.471067 NR_026850 MTMR9LP MTMR9L myotubularin related protein 9 like, pseudogene pseudo chr18-2900 chr18 11711211 11711421 + 7.89 0.000 intron (NM_182978, intron 1 of 11) L1MA10|LINE|L1 22052 NM_182978 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr6-6488 chr6 114295458 114295668 + 7.89 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -232686 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr3-4793 chr3 122965544 122965754 + 7.89 0.000 intron (NR_046079, intron 1 of 22) MLT1J|LTR|ERVL-MaLR 10485 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr11-7051 chr11 119977606 119977816 + 7.89 0.000 Intergenic Intergenic 151142 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr7-6024 chr7 106966389 106966599 + 7.89 0.000 Intergenic LTR1B1|LTR|ERV1 -78211 NM_002736 5577 Hs.433068 NM_002736 ENSG00000005249 PRKAR2B PRKAR2|RII-BETA protein kinase cAMP-dependent type II regulatory subunit beta protein-coding chr1-14653 chr1 58607446 58607656 + 7.89 0.000 Intergenic L1PB2|LINE|L1 -30299 NM_002353 4070 Hs.23582 NM_002353 ENSG00000184292 TACSTD2 EGP-1|EGP1|GA733-1|GA7331|GP50|M1S1|TROP2 tumor associated calcium signal transducer 2 protein-coding chr9-2952 chr9 136709655 136709865 + 7.89 0.000 Intergenic Intergenic -2812 NM_152421 138311 Hs.741305 NM_152421 ENSG00000165716 DIPK1B C9orf136|FAM69B|pp6977 divergent protein kinase domain 1B protein-coding chr2-10222 chr2 107824704 107824914 + 7.89 0.000 intron (NR_024439, intron 2 of 2) intron (NR_024439, intron 2 of 2) 1960 NR_024439 729121 Hs.386155 NR_024439 ENSG00000230651 RGPD4-AS1 - RGPD4 antisense RNA 1 (head to head) ncRNA chr4-7813 chr4 99030431 99030641 + 7.89 0.000 intron (NM_015143, intron 2 of 10) intron (NM_015143, intron 2 of 10) 33149 NR_037455 100500867 NR_037455 ENSG00000265213 MIR3684 - microRNA 3684 ncRNA chr11-6759 chr11 84390685 84390895 + 7.89 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) -73451 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr11-6334 chr11 62769751 62769961 + 7.89 0.000 Intergenic Intergenic -1540 NM_006473 10629 Hs.714400 NM_006473 ENSG00000162227 TAF6L PAF65A TATA-box binding protein associated factor 6 like protein-coding chr19-4569 chr19 10976243 10976453 + 7.89 0.000 intron (NM_003072, intron 1 of 34) intron (NM_003072, intron 1 of 34) -7804 NM_001128845 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr20-3363 chr20 32770528 32770738 + 7.89 0.000 intron (NM_175848, intron 1 of 21) AluSp|SINE|Alu 8248 NM_006892 1789 Hs.643024 NM_006892 ENSG00000088305 DNMT3B ICF|ICF1|M.HsaIIIB DNA methyltransferase 3 beta protein-coding chr17-5260 chr17 18239132 18239342 + 7.89 0.000 intron (NM_004140, intron 16 of 22) intron (NM_004140, intron 16 of 22) 13602 NM_004140 3996 Hs.513983 NM_004140 ENSG00000131899 LLGL1 DLG4|HUGL|HUGL-1|HUGL1|LLGL|Lgl1|Mgl1 LLGL scribble cell polarity complex component 1 protein-coding chr6-8609 chr6 168558637 168558847 + 7.89 0.000 intron (NM_001166412, intron 7 of 12) intron (NM_001166412, intron 7 of 12) 117558 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr1-13102 chr1 185404323 185404533 + 7.89 0.000 Intergenic LTR1A2|LTR|ERV1 -69389 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr9-5069 chr9 33641051 33641261 + 7.89 0.000 Intergenic L1MEc|LINE|L1 16931 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr10-7185 chr10 108591537 108591747 + 7.89 0.000 Intergenic Intergenic -522349 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr16-2943 chr16 3731119 3731329 + 7.89 0.000 exon (NM_001079846, exon 29 of 30) exon (NM_001079846, exon 29 of 30) -13700 NM_001272049 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr18-3280 chr18 52318928 52319138 + 7.89 0.000 Intergenic Intergenic -21164 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr12-2272 chr12 106108391 106108601 + 7.89 0.000 intron (NM_014840, intron 1 of 6) intron (NM_014840, intron 1 of 6) 31537 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr6-7452 chr6 55704481 55704691 + 7.89 0.000 Intergenic MER21C|LTR|ERVL -125372 NM_001042406 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr2-7423 chr2 10133514 10133724 + 7.89 0.000 Intergenic Intergenic -7763 NR_161344 348738 Hs.454981 NR_161344 ENSG00000171848 C2orf48 - chromosome 2 open reading frame 48 ncRNA chr8-5778 chr8 142536265 142536475 + 7.89 0.000 intron (NM_001702, intron 25 of 30) intron (NM_001702, intron 25 of 30) 78109 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr12-4862 chr12 60162977 60163187 + 7.89 0.000 Intergenic MER66D|LTR|ERV1 473712 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr6-8146 chr6 129908711 129908921 + 7.89 0.000 Intergenic Intergenic -47501 NM_001010876 253582 NM_001010876 ENSG00000203756 TMEM244 C6orf191|bA174C7.4 transmembrane protein 244 protein-coding chr10-2748 chr10 119341593 119341803 + 7.89 0.000 intron (NM_005308, intron 2 of 15) L2b|LINE|L2 -36274 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr6-7616 chr6 77570197 77570407 + 7.89 0.000 Intergenic MER47A|DNA|TcMar-Tigger -79972 NM_001282136 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr5-3288 chr5 117474923 117475133 + 7.89 0.000 intron (NR_046089, intron 3 of 5) intron (NR_046089, intron 3 of 5) 59516 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr15-3635 chr15 79160410 79160620 + 7.89 0.000 Intergenic MIRb|SINE|MIR -49273 NR_029705 406960 NR_029705 ENSG00000207695 MIR184 EDICT|MIRN184|miR-184 microRNA 184 ncRNA chr6-1683 chr6 11044242 11044452 + 7.89 0.000 promoter-TSS (NM_017770) promoter-TSS (NM_017770) -42 NM_017770 54898 Hs.656436 NM_017770 ENSG00000197977 ELOVL2 SSC2 ELOVL fatty acid elongase 2 protein-coding chr4-5699 chr4 30755463 30755673 + 7.89 0.000 intron (NM_032457, intron 1 of 2) MIR|SINE|MIR 35199 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr3-6317 chr3 77370363 77370573 + 7.89 0.000 intron (NM_001290039, intron 2 of 26) intron (NM_001290039, intron 2 of 26) 272456 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr20-2293 chr20 4985669 4985879 + 7.89 0.000 intron (NM_203327, intron 1 of 16) L1MB7|LINE|L1 15736 NM_005116 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr13-4226 chr13 94865287 94865497 + 7.89 0.000 intron (NR_110754, intron 2 of 4) intron (NR_110754, intron 2 of 4) -94649 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr1-6677 chr1 51711245 51711455 + 7.89 0.000 intron (NM_148906, intron 2 of 22) SVA_F|Retroposon|SVA -18500 NM_148904 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr3-10886 chr3 170426056 170426266 + 7.89 0.000 intron (NM_001185056, intron 2 of 2) intron (NM_001185056, intron 2 of 2) 3058 NR_106886 102465497 NR_106886 ENSG00000283474 MIR6828 hsa-mir-6828 microRNA 6828 ncRNA chr11-8039 chr11 20098099 20098309 + 7.89 0.000 intron (NM_182964, intron 31 of 37) intron (NM_182964, intron 31 of 37) -48901 NR_046672 100874014 Hs.557916 NR_046672 ENSG00000254453 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA chr2-13569 chr2 155625022 155625232 + 7.89 0.000 Intergenic MER5A1|DNA|hAT-Charlie 629804 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr3-5859 chr3 34119510 34119720 + 7.89 0.000 Intergenic L1PA6|LINE|L1 320985 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr2-9804 chr2 130986482 130986692 + 7.89 0.000 intron (NM_001367493, intron 4 of 13) intron (NM_001367493, intron 4 of 13) 106575 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr8-5979 chr8 21894663 21894873 + 7.89 0.000 Intergenic Intergenic 18922 NM_003974 9046 Hs.71215 NM_003974 ENSG00000147443 DOK2 p56DOK|p56dok-2 docking protein 2 protein-coding chr1-10263 chr1 119802021 119802231 + 7.89 0.000 3' UTR (NM_001159353, exon 3 of 3) 3' UTR (NM_001159353, exon 3 of 3) 9334 NM_001159353 83998 Hs.660883 NM_032044 ENSG00000134193 REG4 GISP|REG-IV|RELP regenerating family member 4 protein-coding chr17-3130 chr17 38885494 38885704 + 7.89 0.000 intron (NM_001271608, intron 2 of 5) intron (NM_001271608, intron 2 of 5) 15541 NM_006148 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr20-2133 chr20 35804071 35804281 + 7.89 0.000 intron (NM_016436, intron 2 of 17) AluSx1|SINE|Alu 32161 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding chr7-3560 chr7 18927172 18927382 + 7.89 0.000 intron (NM_058176, intron 21 of 22) intron (NM_058176, intron 21 of 22) 190359 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr12-5383 chr12 120535087 120535297 + 7.89 0.000 intron (NM_014868, intron 1 of 16) MIR|SINE|MIR 836 NM_001330474 9921 Hs.442798 NM_014868 ENSG00000022840 RNF10 RIE2 ring finger protein 10 protein-coding chr10-7120 chr10 99041557 99041767 + 7.89 0.000 intron (NM_021828, intron 3 of 11) L1PA16|LINE|L1 -117094 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr3-5033 chr3 32370970 32371180 + 7.89 0.000 TTS (NM_001320308) TTS (NM_001320308) -20778 NM_138410 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr16-3028 chr16 47984372 47984582 + 7.89 0.000 Intergenic MIRb|SINE|MIR 18788 NR_146502 105371238 Hs.743032 NR_146502 LINC02134 - long intergenic non-protein coding RNA 2134 ncRNA chr20-3820 chr20 23791838 23792048 + 7.89 0.000 Intergenic L1PA4|LINE|L1 34786 NM_001322 1470 Hs.669305 NM_001322 ENSG00000170369 CST2 - cystatin SA protein-coding chrX-4361 chrX 48967736 48967946 + 7.89 0.000 intron (NM_004979, intron 1 of 5) intron (NM_004979, intron 1 of 5) 4003 NM_004979 3750 Hs.55276 NM_004979 ENSG00000102057 KCND1 KV4.1 potassium voltage-gated channel subfamily D member 1 protein-coding chr12-5825 chr12 32037598 32037808 + 7.89 0.000 Intergenic Intergenic -69104 NM_001363603 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chrX-1380 chrX 153531018 153531228 + 7.89 0.000 Intergenic G-rich|Low_complexity|Low_complexity -4999 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr20-1552 chr20 62376574 62376784 + 7.89 0.000 Intergenic Intergenic -9367 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr4-2667 chr4 906434 906644 + 7.89 0.000 intron (NM_001318134, intron 1 of 24) intron (NM_001318134, intron 1 of 24) 25777 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr12-3754 chr12 47542119 47542329 + 7.89 0.000 Intergenic Intergenic 127216 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr22-1140 chr22 44957044 44957254 + 7.89 0.000 intron (NM_001284296, intron 2 of 13) intron (NM_001284296, intron 2 of 13) 46470 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr17-8083 chr17 55134713 55134923 + 7.89 0.000 intron (NM_178509, intron 16 of 17) intron (NM_178509, intron 16 of 17) -130142 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr4-4531 chr4 67976543 67976753 + 7.89 0.000 Intergenic L1PA11|LINE|L1 -13155 NM_001114387 339967 Hs.450110 NM_182606 ENSG00000187054 TMPRSS11A ECRG1 transmembrane serine protease 11A protein-coding chr6-6933 chr6 15486064 15486274 + 7.89 0.000 intron (NM_004973, intron 5 of 17) intron (NM_004973, intron 5 of 17) 176859 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr6-4616 chr6 46011175 46011385 + 7.89 0.000 intron (NM_001370649, intron 1 of 5) intron (NM_001370649, intron 1 of 5) 4580 NM_016929 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr18-2914 chr18 12237236 12237446 + 7.89 0.000 Intergenic Intergenic -17020 NR_134607 1149 Hs.249129 NM_001279 ENSG00000176194 CIDEA CIDE-A cell death inducing DFFA like effector a protein-coding chr14-3954 chr14 20953171 20953381 + 7.89 0.000 Intergenic AluSq|SINE|Alu -2211 NM_002934 6036 Hs.728 NM_002934 ENSG00000169385 RNASE2 EDN|RAF3|RNS2 ribonuclease A family member 2 protein-coding chr2-3547 chr2 15611955 15612165 + 7.89 0.000 intron (NM_004939, intron 13 of 25) SVA_D|Retroposon|SVA 20192 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr2-8938 chr2 186158942 186159152 + 7.89 0.000 Intergenic L1PA14|LINE|L1 -72730 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr10-8873 chr10 112708172 112708382 + 7.89 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) 74107 NR_036177 100422909 NR_036177 ENSG00000264763 MIR4295 - microRNA 4295 ncRNA chr11-6831 chr11 95322456 95322666 + 7.89 0.000 Intergenic Intergenic -90086 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr1-14125 chr1 31564321 31564531 + 7.89 0.000 Intergenic Intergenic -12059 NM_001204414 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr16-1677 chr16 86989139 86989349 + 7.89 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -68540 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr1-10092 chr1 95522882 95523092 + 7.89 0.000 Intergenic THE1B|LTR|ERVL-MaLR 12871 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA chr18-1492 chr18 74596951 74597161 + 7.89 0.000 non-coding (NR_024484, exon 1 of 2) non-coding (NR_024484, exon 1 of 2) 779 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr17-6091 chr17 80508465 80508675 + 7.89 0.000 Intergenic AluSx1|SINE|Alu -31963 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr4-5937 chr4 152592942 152593152 + 7.89 0.000 Intergenic SATR2|Satellite|Satellite 56619 NR_039658 100616193 NR_039658 ENSG00000283792 MIR4453 - microRNA 4453 ncRNA chr10-5791 chr10 105745140 105745350 + 7.89 0.000 intron (NR_120625, intron 3 of 3) intron (NR_120625, intron 3 of 3) 75088 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr3-5636 chr3 10900286 10900496 + 7.89 0.000 intron (NM_014229, intron 6 of 13) L2a|LINE|L2 84163 NM_001317406 6538 Hs.655078 NM_014229 ENSG00000132164 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 member 11 protein-coding chr17-7397 chr17 8377184 8377394 + 7.89 0.000 promoter-TSS (NM_001304947) promoter-TSS (NM_001304947) -585 NM_001304947 124751 Hs.304604 NM_213597 ENSG00000184619 KRBA2 - KRAB-A domain containing 2 protein-coding chr11-5467 chr11 75293736 75293946 + 7.89 0.000 intron (NM_004041, intron 1 of 15) MLT1O|LTR|ERVL-MaLR 41345 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr8-3540 chr8 121672975 121673185 + 7.89 0.000 Intergenic Intergenic -31640 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr1-11981 chr1 86370902 86371112 + 7.89 0.000 intron (NM_001007022, intron 10 of 17) intron (NM_001007022, intron 10 of 17) -13320 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr11-5435 chr11 69875050 69875260 + 7.89 0.000 Intergenic Intergenic -55739 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chrX-1073 chrX 134396355 134396565 + 7.89 0.000 intron (NM_032458, intron 5 of 9) intron (NM_032458, intron 5 of 9) 23148 NM_032458 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr1-7458 chr1 64101711 64101921 + 7.89 0.000 intron (NR_110666, intron 5 of 5) L2a|LINE|L2 10389 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr3-7467 chr3 136136249 136136459 + 7.89 0.000 intron (NM_181897, intron 12 of 12) intron (NM_181897, intron 12 of 12) 58114 NM_001145417 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr7-9629 chr7 150836191 150836401 + 7.89 0.000 Intergenic Intergenic -16221 NM_001091 26 Hs.647097 NM_001091 ENSG00000002726 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase copper containing 1 protein-coding chr12-3505 chr12 124814731 124814941 + 7.89 0.000 intron (NR_160424, intron 3 of 11) intron (NR_160424, intron 3 of 11) 24835 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr2-4706 chr2 229714937 229715147 + 7.89 0.000 promoter-TSS (NM_139072) promoter-TSS (NM_139072) -487 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr5-2266 chr5 33321069 33321279 + 7.89 0.000 Intergenic Intergenic 91439 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr5-9060 chr5 170701671 170701881 + 7.89 0.000 intron (NM_001278340, intron 2 of 8) MIRb|SINE|MIR -20306 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr5-4067 chr5 56581004 56581214 + 7.89 0.000 intron (NR_161255, intron 1 of 5) intron (NR_161255, intron 1 of 5) 25147 NR_161255 101928448 Hs.208052 NM_001287053 ENSG00000225940 C5orf67 - chromosome 5 open reading frame 67 ncRNA chr13-2253 chr13 26431026 26431236 + 7.89 0.000 Intergenic Intergenic -126552 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr20-2157 chr20 39854223 39854433 + 7.89 0.000 Intergenic MIR|SINE|MIR -150133 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr10-6508 chr10 60542214 60542424 + 7.89 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 30637 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chrX-3878 chrX 4853004 4853214 + 7.89 0.000 Intergenic Intergenic -219537 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr7-9569 chr7 144895523 144895733 + 7.89 0.000 Intergenic L2b|LINE|L2 -59575 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr6-8251 chr6 137765294 137765504 + 7.89 0.000 Intergenic Intergenic -26362 NR_121618 100507406 Hs.556703 NR_121618 ENSG00000234956 LINC02539 - long intergenic non-protein coding RNA 2539 ncRNA chr8-6164 chr8 32236811 32237021 + 7.89 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -203830 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr11-5583 chr11 107928353 107928563 + 7.89 0.000 promoter-TSS (NM_017516) promoter-TSS (NM_017516) 10 NM_017516 54734 Hs.354906 NM_017516 ENSG00000179331 RAB39A RAB39 RAB39A, member RAS oncogene family protein-coding chr20-2714 chr20 48403204 48403414 + 7.89 0.000 Intergenic Intergenic 43398 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr1-5349 chr1 232704730 232704940 + 7.89 0.000 Intergenic Intergenic -13236 NR_146922 105373199 Hs.254475 NR_146922 ENSG00000225919 LINC01745 - long intergenic non-protein coding RNA 1745 ncRNA chr19-5305 chr19 1559670 1559880 + 7.89 0.000 intron (NM_203304, intron 1 of 1) FordPrefect|DNA|hAT-Tip100 8283 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr8-4937 chr8 107104849 107105059 + 7.89 0.000 Intergenic MamRTE1|LINE|RTE-BovB 231561 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr1-7205 chr1 216310898 216311108 + 7.89 0.000 intron (NM_206933, intron 9 of 71) L1M3f|LINE|L1 112393 NM_007123 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr1-9538 chr1 39680100 39680310 + 7.89 0.000 3' UTR (NM_001282396, exon 5 of 5) 3' UTR (NM_001282396, exon 5 of 5) -8167 NM_032526 84618 Hs.307006 NM_032526 ENSG00000116981 NT5C1A CN-I|CN-IA|CN1|CN1A|CNI 5'-nucleotidase, cytosolic IA protein-coding chr19-4834 chr19 36424241 36424451 + 7.89 0.000 Intergenic MER51A|LTR|ERV1 3172 NR_033748 644189 Hs.608412 NR_033748 LOC644189 - acyl-CoA thioesterase 4 pseudogene pseudo chr12-3093 chr12 17544897 17545107 + 7.89 0.000 Intergenic L1MA4A|LINE|L1 44076 NR_146522 105369678 NR_146522 LINC02378 - long intergenic non-protein coding RNA 2378 ncRNA chr2-11940 chr2 25557270 25557480 + 7.89 0.000 TTS (NM_001320937) TTS (NM_001320937) 92847 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr13-3935 chr13 59501382 59501592 + 7.89 0.000 Intergenic Intergenic -511231 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr3-8093 chr3 13746654 13746864 + 7.89 0.000 TTS (NR_027103) TTS (NR_027103) 96038 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr12-2678 chr12 59534577 59534787 + 7.89 0.000 Intergenic SATR1|Satellite|Satellite -61347 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr5-4165 chr5 98976313 98976523 + 7.89 0.000 intron (NR_151718, intron 1 of 3) intron (NR_151718, intron 1 of 3) -46704 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr5-4720 chr5 42699776 42699986 + 7.89 0.000 exon (NM_000163, exon 6 of 10) exon (NM_000163, exon 6 of 10) -56937 NM_001134848 100129792 Hs.745017 NM_001134848 ENSG00000198865 CCDC152 CH5400 coiled-coil domain containing 152 protein-coding chr8-2609 chr8 58513364 58513574 + 7.89 0.000 Intergenic Intergenic -13306 NM_000780 1581 Hs.1644 NM_000780 ENSG00000167910 CYP7A1 CP7A|CYP7|CYPVII cytochrome P450 family 7 subfamily A member 1 protein-coding chr2-3581 chr2 48714377 48714587 + 7.89 0.000 intron (NM_000233, intron 6 of 10) LTR86A2|LTR|ERVL 41242 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr19-6673 chr19 34509927 34510137 + 7.89 0.000 3' UTR (NM_001080436, exon 8 of 8) 3' UTR (NM_001080436, exon 8 of 8) 28274 NM_001080436 126374 Hs.585010 NM_001080436 ENSG00000142279 WTIP - WT1 interacting protein protein-coding chr4-3833 chr4 122905507 122905717 + 7.89 0.000 intron (NM_198041, intron 3 of 4) intron (NM_198041, intron 3 of 4) 16985 NM_007083 11162 Hs.558459 NM_007083 ENSG00000170917 NUDT6 ASFGF2|FGF-AS|FGF2AS|GFG-1|GFG1 nudix hydrolase 6 protein-coding chr17-4422 chr17 40605400 40605610 + 7.89 0.000 Intergenic Intergenic -40033 NM_001301714 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr5-7043 chr5 168232462 168232672 + 7.89 0.000 promoter-TSS (NR_109894) promoter-TSS (NR_109894) -195 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA chr4-2268 chr4 176065772 176065982 + 7.89 0.000 promoter-TSS (NM_001350727) promoter-TSS (NM_001350727) 36 NM_170710 116966 Hs.532056 NM_170710 ENSG00000150627 WDR17 - WD repeat domain 17 protein-coding chr8-3276 chr8 19579976 19580186 + 7.89 0.000 intron (NM_001354495, intron 2 of 9) intron (NM_001354495, intron 2 of 9) 22464 NM_001354494 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr17-4348 chr17 5120169 5120379 + 7.89 0.000 intron (NM_001304284, intron 2 of 37) intron (NM_001304284, intron 2 of 37) 2768 NM_001320953 7775 Hs.279914 NM_014519 ENSG00000167840 ZNF232 ZSCAN11 zinc finger protein 232 protein-coding chr11-7977 chr11 9588526 9588736 + 7.89 0.000 3' UTR (NM_001143976, exon 11 of 11) 3' UTR (NM_001143976, exon 11 of 11) 13944 NM_001143976 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr10-8909 chr10 115101191 115101401 + 7.89 0.000 intron (NR_074088, intron 2 of 9) L1ME1|LINE|L1 7931 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr4-4375 chr4 40379873 40380083 + 7.89 0.000 Intergenic L1M1|LINE|L1 44645 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chrX-1925 chrX 153354099 153354309 + 7.89 0.000 intron (NR_135656, intron 1 of 2) intron (NR_135656, intron 1 of 2) 2175 NR_135656 105373378 Hs.719349 NR_135656 ENSG00000063587 LOC105373378 - uncharacterized LOC105373378 ncRNA chr9-3542 chr9 36982468 36982678 + 7.89 0.000 intron (NM_001280554, intron 4 of 8) L2c|LINE|L2 51695 NM_016734 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr7-5544 chr7 45613727 45613937 + 7.89 0.000 intron (NM_001281768, intron 4 of 9) L1M4c|LINE|L1 39464 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr2-5433 chr2 119823726 119823936 + 7.89 0.000 intron (NM_002830, intron 2 of 26) MLT1G|LTR|ERVL-MaLR 63909 NM_002830 5775 Hs.469809 NM_002830 ENSG00000088179 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase non-receptor type 4 protein-coding chr11-6682 chr11 76838750 76838960 + 7.89 0.000 Intergenic Intergenic -22063 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr8-3731 chr8 22021571 22021781 + 7.89 0.000 Intergenic AluSc|SINE|Alu -2458 NM_001286680 10361 Hs.131055 NM_182795 ENSG00000158806 NPM2 - nucleophosmin/nucleoplasmin 2 protein-coding chr5-3809 chr5 91126562 91126772 + 7.89 0.000 intron (NR_003149, intron 87 of 89) intron (NR_003149, intron 87 of 89) 187735 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr15-3444 chr15 91099603 91099813 + 7.89 0.000 promoter-TSS (NM_001323032) promoter-TSS (NM_001323032) 120 NM_001323031 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chrX-2577 chrX 103684864 103685074 + 7.89 0.000 intron (NM_001142424, intron 2 of 4) intron (NM_001142424, intron 2 of 4) 1730 NM_012286 9643 Hs.326387 NM_012286 ENSG00000123562 MORF4L2 MORFL2|MRGX mortality factor 4 like 2 protein-coding chr7-6183 chr7 128960051 128960261 + 7.89 0.000 intron (NM_001191028, intron 20 of 21) Tigger3b|DNA|TcMar-Tigger 18888 NM_001364314 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr6-7774 chr6 96576491 96576701 + 7.89 0.000 intron (NM_020482, intron 2 of 6) intron (NM_020482, intron 2 of 6) 13471 NM_001322467 9457 Hs.632608 NM_020482 ENSG00000112214 FHL5 1700027G07Rik|ACT|FHL-5|dJ393D12.2 four and a half LIM domains 5 protein-coding chr6-1366 chr6 68634677 68634887 + 7.89 0.000 promoter-TSS (NR_125872) promoter-TSS (NR_125872) -458 NR_125872 101928307 Hs.535825 NR_125872 ENSG00000230910 LOC101928307 - uncharacterized LOC101928307 ncRNA chr13-3235 chr13 29163619 29163829 + 7.89 0.000 intron (NM_001033602, intron 3 of 13) intron (NM_001033602, intron 3 of 13) 139267 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr2-12587 chr2 70612714 70612924 + 7.89 0.000 Intergenic Intergenic -58993 NM_003236 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr18-2727 chr18 71447508 71447718 + 7.89 0.000 Intergenic L1PA10|LINE|L1 131343 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr3-6191 chr3 61273142 61273352 + 7.89 0.000 Intergenic L1MA1|LINE|L1 -21786 NR_148921 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr3-10834 chr3 164742533 164742743 + 7.89 0.000 intron (NR_126405, intron 1 of 3) intron (NR_126405, intron 1 of 3) 88842 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr8-7379 chr8 138491708 138491918 + 7.89 0.000 intron (NM_001362965, intron 1 of 19) L2a|LINE|L2 5448 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr8-6393 chr8 55367174 55367384 + 7.89 0.000 intron (NM_052898, intron 2 of 2) L1ME3|LINE|L1 88042 NR_027765 100133234 Hs.729852 NR_027765 ENSG00000248522 SBF1P1 - SET binding factor 1 pseudogene 1 pseudo chr11-7972 chr11 8699817 8700027 + 7.89 0.000 intron (NM_005418, intron 17 of 22) intron (NM_005418, intron 17 of 22) 14483 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr12-7625 chr12 79886450 79886660 + 7.89 0.000 intron (NM_001244990, intron 2 of 24) intron (NM_001244990, intron 2 of 24) 27356 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr22-3089 chr22 45004610 45004820 + 7.89 0.000 intron (NM_001284296, intron 2 of 13) intron (NM_001284296, intron 2 of 13) -1096 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr8-6630 chr8 77426255 77426465 + 7.89 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -24337 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr10-4293 chr10 12995426 12995636 + 7.89 0.000 intron (NM_001282658, intron 6 of 6) AluSz|SINE|Alu 6182 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr2-14518 chr2 228763443 228763653 + 7.89 0.000 Intergenic Intergenic -152153 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr5-5759 chr5 172831067 172831277 + 7.89 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -3079 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr12-5938 chr12 75658895 75659105 + 7.89 0.000 Intergenic Intergenic -147391 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr6-3972 chr6 107627195 107627405 + 7.89 0.000 intron (NM_018013, intron 5 of 6) intron (NM_018013, intron 5 of 6) 104850 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr20-4444 chr20 61821550 61821760 + 7.89 0.000 intron (NM_001252339, intron 3 of 14) intron (NM_001252339, intron 3 of 14) -101907 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr12-3613 chr12 65657036 65657246 + 7.89 0.000 Intergenic Intergenic -14769 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr11-6288 chr11 60974971 60975181 + 7.89 0.000 intron (NM_001254751, intron 1 of 10) MamRep1151|LTR?|LTR? 3396 NM_001254751 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr5-7725 chr5 58883143 58883353 + 7.89 0.000 Intergenic L1MA6|LINE|L1 116650 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr13-2284 chr13 28964823 28965033 + 7.89 0.000 intron (NM_001366651, intron 2 of 14) intron (NM_001366651, intron 2 of 14) -59529 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr9-5468 chr9 99181428 99181638 + 7.89 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 40409 NR_024532 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2 alpha-1,3/1,6-mannosyltransferase protein-coding chr12-7056 chr12 40785991 40786201 + 7.89 0.000 intron (NM_001256063, intron 1 of 15) MSTB|LTR|ERVL-MaLR -41842 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr16-6574 chr16 66455126 66455336 + 7.89 0.000 intron (NM_001178020, intron 2 of 4) intron (NM_001178020, intron 2 of 4) 21171 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr7-5434 chr7 37095068 37095278 + 7.89 0.000 intron (NM_001206480, intron 15 of 21) intron (NM_001206480, intron 15 of 21) 97377 NR_104120 100861514 Hs.627775 NR_104120 ENSG00000224101 ELMO1-AS1 - ELMO1 antisense RNA 1 ncRNA chr14-5103 chr14 88201232 88201442 + 7.89 0.000 intron (NM_138317, intron 4 of 6) intron (NM_138317, intron 4 of 6) 69574 NM_138318 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr2-5064 chr2 7993070 7993280 + 7.89 0.000 Intergenic Intergenic -16361 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr3-5031 chr3 32067992 32068202 + 7.89 0.000 Intergenic HERVH-int|LTR|ERV1 -38414 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chr10-4810 chr10 10398640 10398850 + 7.89 0.000 Intergenic Intergenic 63604 NR_120637 101928322 Hs.576789 NR_120637 ENSG00000270111 CELF2-DT - CELF2 divergent transript ncRNA chr6-3079 chr6 77572876 77573086 + 7.89 0.000 Intergenic AluSx|SINE|Alu -77293 NM_001282136 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr2-9840 chr2 164355448 164355658 + 7.89 0.000 Intergenic AluSx3|SINE|Alu 212942 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr2-8421 chr2 118855517 118855727 + 7.89 0.000 Intergenic CpG -7439 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr1-8533 chr1 157139011 157139221 + 7.89 0.000 promoter-TSS (NM_001145312) promoter-TSS (NM_001145312) -525 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr4-8424 chr4 153207514 153207724 + 7.89 0.000 intron (NM_001302693, intron 1 of 2) intron (NM_001302693, intron 1 of 2) 3176 NM_001351057 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr11-10403 chr11 114198252 114198462 + 7.89 0.000 intron (NM_006006, intron 4 of 6) intron (NM_006006, intron 4 of 6) -97456 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr3-8299 chr3 59989590 59989800 + 7.89 0.000 intron (NM_001320901, intron 5 of 6) intron (NM_001320901, intron 5 of 6) 91214 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr16-5298 chr16 68056446 68056656 + 7.89 0.000 intron (NM_017803, intron 7 of 16) L1MC4|LINE|L1 -28819 NM_004555 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr10-5831 chr10 112208294 112208504 + 7.89 0.000 Intergenic Intergenic -24634 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr3-3021 chr3 111247112 111247322 + 7.89 0.000 Intergenic Intergenic 175401 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr7-8491 chr7 51121563 51121773 + 7.89 0.000 intron (NM_015198, intron 6 of 12) intron (NM_015198, intron 6 of 12) 195141 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr21-1713 chr21 32029362 32029572 + 7.89 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger 56828 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr2-2701 chr2 36707268 36707478 + 7.89 0.000 intron (NM_001177969, intron 1 of 14) intron (NM_001177969, intron 1 of 14) 10666 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr10-4070 chr10 43086358 43086568 + 7.89 0.000 intron (NM_020630, intron 1 of 18) intron (NM_020630, intron 1 of 18) 9394 NM_020975 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr2-11081 chr2 122413894 122414104 + 7.89 0.000 Intergenic Intergenic 658348 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr2-10954 chr2 84927012 84927222 + 7.89 0.000 Intergenic Intergenic 21461 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr1-6126 chr1 159931619 159931829 + 7.89 0.000 intron (NM_020789, intron 11 of 20) intron (NM_020789, intron 11 of 20) -6217 NM_003564 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr18-2988 chr18 24161630 24161840 + 7.89 0.000 TTS (NM_018030) TTS (NM_018030) 22251 NM_138644 26256 Hs.511983 NM_012189 ENSG00000154040 CABYR CABYRa|CABYRc|CABYRc/d|CABYRe|CBP86|CT88|FSP-2|FSP2 calcium binding tyrosine phosphorylation regulated protein-coding chr11-4990 chr11 72534859 72535069 + 7.89 0.000 Intergenic Intergenic -35692 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr2-14004 chr2 191032661 191032871 + 7.89 0.000 TTS (NR_136318) TTS (NR_136318) 11240 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr20-3584 chr20 3875287 3875497 + 7.89 0.000 non-coding (NR_037921, exon 6 of 6) non-coding (NR_037921, exon 6 of 6) -13389 NM_024960 80025 Hs.114180 NM_024960 ENSG00000125779 PANK2 C20orf48|HARP|HSS|NBIA1|PKAN pantothenate kinase 2 protein-coding chr9-5190 chr9 71647181 71647391 + 7.89 0.000 Intergenic Intergenic 121227 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr17-4278 chr17 68259067 68259277 + 7.89 0.000 promoter-TSS (NM_014960) promoter-TSS (NM_014960) 2 NM_001352903 22901 Hs.437249 NM_014960 ENSG00000141337 ARSG USH4 arylsulfatase G protein-coding chr5-9122 chr5 174315484 174315694 + 7.89 0.000 Intergenic L2a|LINE|L2 -20765 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr10-6502 chr10 59450637 59450847 + 7.89 0.000 Intergenic AluY|SINE|Alu -87561 NM_001347840 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr11-2269 chr11 131688095 131688305 + 7.89 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -24644 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr2-12704 chr2 78011408 78011618 + 7.89 0.000 intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) -56487 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA chr1-4772 chr1 11650475 11650685 + 7.89 0.000 exon (NM_012168, exon 2 of 6) exon (NM_012168, exon 2 of 6) -3827 NM_183412 93611 Hs.556006 NM_033182 ENSG00000132879 FBXO44 FBG3|FBX30|FBX6A|Fbx44|Fbxo6a F-box protein 44 protein-coding chr17-4491 chr17 67441129 67441339 + 7.89 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -30255 NR_037517 100500895 NR_037517 ENSG00000207688 MIR548AA2 - microRNA 548aa-2 ncRNA chr8-7378 chr8 138465473 138465683 + 7.89 0.000 intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 31683 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr16-3723 chr16 5033330 5033540 + 7.89 0.000 promoter-TSS (NR_038913) promoter-TSS (NR_038913) -267 NR_038913 100507589 Hs.729936 NR_038913 NAGPA-AS1 - NAGPA antisense RNA 1 ncRNA chr15-2829 chr15 40016615 40016825 + 7.89 0.000 intron (NM_001013703, intron 28 of 38) intron (NM_001013703, intron 28 of 38) 22461 NM_003134 6727 Hs.533732 NM_003134 ENSG00000140319 SRP14 ALURBP signal recognition particle 14 protein-coding chr4-3670 chr4 37450367 37450577 + 7.89 0.000 Intergenic Intergenic -3453 NM_001104629 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr1-12406 chr1 9918266 9918476 + 7.89 0.000 Intergenic L2c|LINE|L2 -8102 NM_020248 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr19-3228 chr19 494270 494480 + 7.89 0.000 Intergenic Intergenic -2111 NM_130760 8174 Hs.102598 NM_130760 ENSG00000099866 MADCAM1 MACAM1 mucosal vascular addressin cell adhesion molecule 1 protein-coding chr12-6862 chr12 18422727 18422937 + 7.89 0.000 intron (NM_001288774, intron 17 of 32) intron (NM_001288774, intron 17 of 32) 161292 NM_001288772 5288 Hs.22500 NM_004570 ENSG00000139144 PIK3C2G PI3K-C2-gamma|PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma protein-coding chr6-3458 chr6 161827517 161827727 + 7.89 0.000 intron (NM_004562, intron 6 of 11) AluSx|SINE|Alu 356645 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr3-10123 chr3 113163328 113163538 + 7.89 0.000 intron (NR_110823, intron 2 of 3) intron (NR_110823, intron 2 of 3) 4298 NR_110823 101929717 Hs.638426 NR_110823 ENSG00000243795 LINC02044 - long intergenic non-protein coding RNA 2044 ncRNA chr10-5585 chr10 91781214 91781424 + 7.78 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 16877 NR_108070 100507633 Hs.291528 NR_108070 ENSG00000228701 TNKS2-AS1 - TNKS2 antisense RNA 1 (head to head) ncRNA chr1-16393 chr1 223208164 223208374 + 7.78 0.000 Intergenic HERVP71A-int|LTR|ERV1 -65021 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr6-8133 chr6 129105163 129105373 + 7.78 0.000 intron (NM_000426, intron 4 of 64) intron (NM_000426, intron 4 of 64) 222127 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr2-5948 chr2 36528894 36529104 + 7.78 0.000 intron (NM_016441, intron 13 of 16) intron (NM_016441, intron 13 of 16) 69169 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr14-2363 chr14 30739221 30739431 + 7.78 0.000 Intergenic MER21C|LTR|ERVL 117007 NM_001257376 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr5-8522 chr5 134183620 134183830 + 7.78 0.000 Intergenic Intergenic -6692 NM_006930 6500 Hs.171626 NM_006930 ENSG00000113558 SKP1 EMC19|OCP-II|OCP2|SKP1A|TCEB1L|p19A S-phase kinase associated protein 1 protein-coding chr3-9355 chr3 46660899 46661109 + 7.78 0.000 Intergenic Intergenic 32675 NM_147129 259173 Hs.517937 NM_147129 ENSG00000178038 ALS2CL RN49018 ALS2 C-terminal like protein-coding chr16-2193 chr16 74748880 74749090 + 7.78 0.000 intron (NM_024306, intron 1 of 6) intron (NM_024306, intron 1 of 6) 25835 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr16-4667 chr16 76933037 76933247 + 7.78 0.000 Intergenic L2b|LINE|L2 64206 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr16-3536 chr16 31513131 31513341 + 7.78 0.000 Intergenic LTR3B_|LTR|ERVK -4845 NM_022744 64755 Hs.9003 NM_022744 ENSG00000140688 C16orf58 RUS chromosome 16 open reading frame 58 protein-coding chr20-2103 chr20 25398050 25398260 + 7.78 0.000 Intergenic HERVK3-int|LTR|ERVK -7320 NM_015600 26090 Hs.441550 NM_015600 ENSG00000100997 ABHD12 ABHD12A|BEM46L2|C20orf22|PHARC|dJ965G21.2|hABHD12 abhydrolase domain containing 12 protein-coding chr6-7663 chr6 84126662 84126872 + 7.78 0.000 intron (NM_001286206, intron 25 of 26) intron (NM_001286206, intron 25 of 26) 92648 NM_001346544 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr22-1746 chr22 24053752 24053962 + 7.78 0.000 intron (NM_012295, intron 8 of 36) L2b|LINE|L2 42487 NM_001199281 23523 Hs.517478 NM_012295 ENSG00000099991 CABIN1 CAIN|KB-318B8.7|PPP3IN calcineurin binding protein 1 protein-coding chr6-4455 chr6 35219753 35219963 + 7.78 0.000 intron (NM_001303136, intron 1 of 21) intron (NM_001303136, intron 1 of 21) 5902 NM_001303136 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding chr14-1897 chr14 101622185 101622395 + 7.78 0.000 Intergenic AluJb|SINE|Alu 60939 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr15-2667 chr15 76991715 76991925 + 7.78 0.000 Intergenic Intergenic -2860 NM_001321137 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chr4-6133 chr4 26206289 26206499 + 7.78 0.000 Intergenic Intergenic -113316 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr13-3486 chr13 20099409 20099619 + 7.78 0.000 Intergenic LTR41C|LTR|ERVL -3187 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr1-12799 chr1 83891690 83891900 + 7.78 0.000 intron (NM_001350215, intron 17 of 19) L1ME3F|LINE|L1 -30799 NR_119375 101927587 Hs.621230 NR_119375 ENSG00000233008 LINC01725 - long intergenic non-protein coding RNA 1725 ncRNA chr10-6635 chr10 99513175 99513385 + 7.78 0.000 Intergenic MIRb|SINE|MIR 17897 NR_120618 101927324 Hs.642588 NR_120618 ENSG00000257582 LINC01475 - long intergenic non-protein coding RNA 1475 ncRNA chr6-6077 chr6 142891735 142891945 + 7.78 0.000 intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 53336 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr4-4676 chr4 85333051 85333261 + 7.78 0.000 Intergenic L1PBa|LINE|L1 -141994 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr22-2726 chr22 38601087 38601297 + 7.78 0.000 intron (NM_001013647, intron 13 of 16) L2a|LINE|L2 30692 NR_134627 105373031 Hs.144041 NR_134627 LOC105373031 - uncharacterized LOC105373031 ncRNA chr15-4284 chr15 37853563 37853773 + 7.78 0.000 Intergenic Intergenic -80939 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr11-6395 chr11 65251592 65251802 + 7.78 0.000 Intergenic Intergenic -10265 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr7-6319 chr7 140811090 140811300 + 7.78 0.000 intron (NR_148928, intron 3 of 17) Tigger17a|DNA|TcMar-Tigger 113734 NM_001354609 673 Hs.324250 NM_004333 ENSG00000157764 BRAF B-RAF1|B-raf|BRAF1|NS7|RAFB1 B-Raf proto-oncogene, serine/threonine kinase protein-coding chr4-5615 chr4 2734379 2734589 + 7.78 0.000 Intergenic L1M4b|LINE|L1 21852 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr12-5573 chr12 15981958 15982168 + 7.78 0.000 intron (NM_001300779, intron 5 of 7) intron (NM_001300779, intron 5 of 7) 70731 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr16-4163 chr16 6406111 6406321 + 7.78 0.000 intron (NM_018723, intron 2 of 15) intron (NM_018723, intron 2 of 15) -367593 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr3-5513 chr3 196026869 196027079 + 7.78 0.000 Intergenic Intergenic -36695 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr11-5182 chr11 9329175 9329385 + 7.78 0.000 Intergenic Intergenic -14687 NM_015012 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B - transmembrane protein 41B protein-coding chr22-3499 chr22 46456388 46456598 + 7.78 0.000 intron (NM_014246, intron 2 of 34) AluY|SINE|Alu 81127 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr17-8183 chr17 62085875 62086085 + 7.78 0.000 Intergenic Intergenic -20702 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr12-4585 chr12 31837753 31837963 + 7.78 0.000 Intergenic Intergenic -45560 NM_001013699 440093 Hs.448697 NM_001013699 ENSG00000188375 H3F3C H3.5 H3 histone family member 3C protein-coding chr1-16022 chr1 200105301 200105511 + 7.78 0.000 intron (NM_205860, intron 5 of 7) L2b|LINE|L2 62581 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr17-5888 chr17 72292655 72292865 + 7.78 0.000 Intergenic L2c|LINE|L2 -50051 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr3-5875 chr3 36147589 36147799 + 7.78 0.000 Intergenic Intergenic -232793 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr1-12820 chr1 87320008 87320218 + 7.78 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -8767 NM_006769 8543 Hs.436792 NM_006769 ENSG00000143013 LMO4 - LIM domain only 4 protein-coding chr1-6455 chr1 18863746 18863956 + 7.78 0.000 Intergenic Intergenic -4190 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr19-6670 chr19 34408706 34408916 + 7.78 0.000 intron (NM_001353433, intron 3 of 6) LTR67B|LTR|ERVL 4412 NM_032346 84306 Hs.515344 NM_032346 ENSG00000126249 PDCD2L - programmed cell death 2 like protein-coding chr7-5546 chr7 45662846 45663056 + 7.78 0.000 intron (NM_021116, intron 8 of 19) intron (NM_021116, intron 8 of 19) 88583 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr5-3437 chr5 155607802 155608012 + 7.78 0.000 Intergenic L2b|LINE|L2 594152 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chrX-3238 chrX 68846670 68846880 + 7.78 0.000 Intergenic Intergenic 17778 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr4-2043 chr4 7785084 7785294 + 7.78 0.000 intron (NM_001134647, intron 12 of 17) intron (NM_001134647, intron 12 of 17) 31099 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr1-13692 chr1 12684117 12684327 + 7.78 0.000 Intergenic MIRb|SINE|MIR -31888 NM_001103170 126767 Hs.464705 NM_001103169 ENSG00000188984 AADACL3 - arylacetamide deacetylase like 3 protein-coding chr17-6404 chr17 1531512 1531722 + 7.78 0.000 intron (NM_006224, intron 10 of 11) FRAM|SINE|Alu 14698 NR_028514 100306951 Hs.633815 NR_028514 ENSG00000236618 PITPNA-AS1 - PITPNA antisense RNA 1 ncRNA chr5-3098 chr5 42945064 42945274 + 7.78 0.000 Intergenic Intergenic 48164 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr22-2491 chr22 22080104 22080314 + 7.78 0.000 Intergenic Intergenic -36275 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr10-7051 chr10 84616971 84617181 + 7.78 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR 191907 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr1-14892 chr1 82212122 82212332 + 7.78 0.000 Intergenic Intergenic 409774 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr17-6820 chr17 11581844 11582054 + 7.78 0.000 Intergenic ERVL-B4-int|LTR|ERVL -16521 NM_001372 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr6-7075 chr6 33709005 33709215 + 7.78 0.000 intron (NM_032340, intron 1 of 3) intron (NM_032340, intron 1 of 3) 2590 NM_032340 84300 Hs.732448 NM_032340 ENSG00000137288 UQCC2 C6orf125|C6orf126|Cbp6|M19|MC3DN7|MNF1|bA6B20.2 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding chr3-6121 chr3 54172667 54172877 + 7.78 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 50220 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr1-7334 chr1 4592219 4592429 + 7.78 0.000 Intergenic Intergenic 20837 NR_147025 105376679 NR_147025 ENSG00000232596 LINC01646 - long intergenic non-protein coding RNA 1646 ncRNA chr5-8684 chr5 141690553 141690763 + 7.78 0.000 Intergenic ERVL-E-int|LTR|ERVL -8428 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr8-3920 chr8 41865135 41865345 + 7.78 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 31501 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr1-15906 chr1 184555387 184555597 + 7.78 0.000 intron (NM_030806, intron 3 of 5) intron (NM_030806, intron 3 of 5) 168463 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr4-5930 chr4 151113376 151113586 + 7.78 0.000 Intergenic Intergenic 9654 NR_000007 8944 NR_000007 ENSG00000208797 SNORD73A RNU73|RNU73A|U73|U73a small nucleolar RNA, C/D box 73A snoRNA chr6-6569 chr6 137119243 137119453 + 7.78 0.000 Intergenic LTR76|LTR|ERV1 54296 NM_181310 116379 Hs.126891 NM_052962 ENSG00000164485 IL22RA2 CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16 interleukin 22 receptor subunit alpha 2 protein-coding chr19-4993 chr19 46913225 46913435 + 7.78 0.000 intron (NM_004491, intron 1 of 6) intron (NM_004491, intron 1 of 6) 52333 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr1-12418 chr1 10898180 10898390 + 7.78 0.000 Intergenic Intergenic 68402 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr13-3396 chr13 91408174 91408384 + 7.78 0.000 intron (NM_004466, intron 1 of 7) L1MA8|LINE|L1 9658 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr22-2354 chr22 43365418 43365628 + 7.78 0.000 Intergenic AluSp|SINE|Alu -22151 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr17-4354 chr17 7637264 7637474 + 7.78 0.000 Intergenic AluSx|SINE|Alu 7234 NM_001040 6462 Hs.632235 NM_001040 ENSG00000129214 SHBG ABP|SBP|TEBG sex hormone binding globulin protein-coding chr12-4760 chr12 52572415 52572625 + 7.78 0.000 exon (NM_175053, exon 2 of 9) exon (NM_175053, exon 2 of 9) 1323 NM_175053 121391 Hs.660125 NM_175053 ENSG00000170484 KRT74 ADWH|HTSS2|HYPT3|K6IRS4|KRT5C|KRT6IRS4 keratin 74 protein-coding chr1-4596 chr1 120415798 120416008 + 7.78 0.000 intron (NM_001037501, intron 1 of 22) intron (NM_001037501, intron 1 of 22) 876 NR_102404 728841 Hs.445080 NM_001037501 NBPF8 NBPF8P NBPF member 8 protein-coding chr16-4357 chr16 46620565 46620775 + 7.78 0.000 intron (NM_001324318, intron 1 of 12) intron (NM_001324318, intron 1 of 12) 709 NR_136738 79801 Hs.123253 NM_024745 ENSG00000171241 SHCBP1 PAL SHC binding and spindle associated 1 protein-coding chr7-9249 chr7 122189928 122190138 + 7.78 0.000 Intergenic Intergenic -45784 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr12-7549 chr12 71448334 71448544 + 7.78 0.000 intron (NR_110596, intron 1 of 19) intron (NR_110596, intron 1 of 19) 8641 NM_001277227 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding chrX-5191 chrX 134042520 134042730 + 7.78 0.000 Intergenic AluJb|SINE|Alu -56979 NM_004484 2719 Hs.644108 NM_004484 ENSG00000147257 GPC3 DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1 glypican 3 protein-coding chr1-4363 chr1 119713781 119713991 + 7.78 0.000 intron (NM_006623, intron 1 of 11) intron (NM_006623, intron 1 of 11) 1952 NM_006623 26227 Hs.487296 NM_006623 ENSG00000092621 PHGDH 3-PGDH|3PGDH|HEL-S-113|NLS|NLS1|PDG|PGAD|PGD|PGDH|PHGDHD|SERA phosphoglycerate dehydrogenase protein-coding chr22-2524 chr22 24746210 24746420 + 7.78 0.000 intron (NM_001008496, intron 12 of 20) L1MA2|LINE|L1 -18186 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo chr7-6513 chr7 25885495 25885705 + 7.78 0.000 Intergenic Intergenic 64386 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr1-9032 chr1 11985937 11986147 + 7.78 0.000 intron (NM_014874, intron 2 of 18) intron (NM_014874, intron 2 of 18) 5861 NM_001127660 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr16-4857 chr16 88266096 88266306 + 7.78 0.000 Intergenic Intergenic 71920 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr12-7649 chr12 82794403 82794613 + 7.78 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 107353 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr9-8039 chr9 95737413 95737623 + 7.78 0.000 Intergenic Intergenic -138173 NM_020207 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr12-8328 chr12 130160894 130161104 + 7.78 0.000 non-coding (NR_033834, exon 1 of 4) non-coding (NR_033834, exon 1 of 4) 679 NR_033834 440119 Hs.288262 NR_033834 ENSG00000250208 FZD10-AS1 FZD10-DT FZD10 antisense divergent transcript ncRNA chr7-6321 chr7 141094073 141094283 + 7.78 0.000 intron (NM_001195278, intron 1 of 3) intron (NM_001195278, intron 1 of 3) 20114 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr4-4648 chr4 81995284 81995494 + 7.78 0.000 Intergenic Intergenic 378602 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr20-1745 chr20 47401741 47401951 + 7.78 0.000 intron (NR_146496, intron 1 of 2) AluJo|SINE|Alu 9548 NR_146495 102723442 NR_146494 LINC01754 - long intergenic non-protein coding RNA 1754 ncRNA chr20-4441 chr20 61680396 61680606 + 7.78 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 39247 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr1-10086 chr1 94705314 94705524 + 7.78 0.000 intron (NR_160779, intron 2 of 5) intron (NR_160779, intron 2 of 5) 40481 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr4-3129 chr4 170192607 170192817 + 7.78 0.000 Intergenic HERV17-int|LTR|ERV1 -33879 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chr1-9395 chr1 31304958 31305168 + 7.78 0.000 intron (NM_001282566, intron 1 of 6) intron (NM_001282566, intron 1 of 6) 8081 NM_001282574 51538 Hs.524094 NM_016505 ENSG00000121766 ZCCHC17 HSPC251|PS1D|pNO40 zinc finger CCHC-type containing 17 protein-coding chr2-3369 chr2 2865974 2866184 + 7.78 0.000 Intergenic Intergenic 259947 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr15-5241 chr15 97865368 97865578 + 7.78 0.000 intron (NR_024172, intron 1 of 2) intron (NR_024172, intron 1 of 2) 8956 NR_024173 91948 Hs.130423 NR_024172 ENSG00000251209 LINC00923 - long intergenic non-protein coding RNA 923 ncRNA chr19-6416 chr19 14895640 14895850 + 7.78 0.000 Intergenic Intergenic -14390 NM_030901 26333 Hs.247717 NM_030901 ENSG00000185385 OR7A17 BC85395_4|HTPCRX19 olfactory receptor family 7 subfamily A member 17 protein-coding chr6-8249 chr6 137652000 137652210 + 7.78 0.000 Intergenic Intergenic -13541 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr2-3110 chr2 151111669 151111879 + 7.78 0.000 Intergenic MER4D|LTR|ERV1 150089 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr8-4079 chr8 67237711 67237921 + 7.78 0.000 intron (NM_006421, intron 22 of 38) intron (NM_006421, intron 22 of 38) 105965 NM_006421 10565 Hs.656902 NM_006421 ENSG00000066777 ARFGEF1 ARFGEP1|BIG1|P200 ADP ribosylation factor guanine nucleotide exchange factor 1 protein-coding chr10-7075 chr10 89615774 89615984 + 7.78 0.000 intron (NM_148977, intron 1 of 6) intron (NM_148977, intron 1 of 6) -23052 NR_029524 406901 NR_029524 ENSG00000198997 MIR107 MIRN107|miR-107 microRNA 107 ncRNA chr16-5452 chr16 1936048 1936258 + 7.78 0.000 Intergenic AluSx|SINE|Alu 7173 NM_016332 51734 Hs.655346 NM_016332 ENSG00000198736 MSRB1 HSPC270|SELR|SELX|SEPX1|SepR methionine sulfoxide reductase B1 protein-coding chr2-4379 chr2 32047860 32048070 + 7.78 0.000 Intergenic AluSz|SINE|Alu -8130 NM_032574 84661 Hs.531788 NM_032574 ENSG00000162961 DPY30 Cps25|HDPY-30|Saf19 dpy-30 histone methyltransferase complex regulatory subunit protein-coding chr14-892 chr14 22872399 22872609 + 7.78 0.000 intron (NM_001329226, intron 1 of 7) intron (NM_001329226, intron 1 of 7) 764 NM_001329226 26020 Hs.525232 NM_014045 ENSG00000197324 LRP10 LRP-10|LRP9|MST087|MSTP087 LDL receptor related protein 10 protein-coding chr17-6007 chr17 78155056 78155266 + 7.78 0.000 intron (NM_001163075, intron 2 of 4) MER20|DNA|hAT-Charlie 8776 NM_001163075 100141515 Hs.633034 NM_001163075 ENSG00000187997 C17orf99 IL-40|UNQ464 chromosome 17 open reading frame 99 protein-coding chr7-8811 chr7 83327001 83327211 + 7.78 0.000 Intergenic LTR33|LTR|ERVL -164222 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr10-7695 chr10 29732024 29732234 + 7.78 0.000 intron (NM_001323599, intron 1 of 38) intron (NM_001323599, intron 1 of 38) 3672 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chrX-5067 chrX 124377395 124377605 + 7.78 0.000 3' UTR (NM_001163279, exon 32 of 32) 3' UTR (NM_001163279, exon 32 of 32) 31218 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr9-6429 chr9 73767339 73767549 + 7.78 0.000 Intergenic Intergenic -604087 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr4-4562 chr4 74159164 74159374 + 7.78 0.000 intron (NM_001144978, intron 1 of 7) intron (NM_001144978, intron 1 of 7) 1151 NR_147097 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr8-6806 chr8 96104856 96105066 + 7.78 0.000 Intergenic Intergenic 55845 NM_001001557 392255 Hs.492277 NM_001001557 ENSG00000156466 GDF6 BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|SGM1|SYNS4 growth differentiation factor 6 protein-coding chr11-4767 chr11 118425345 118425555 + 7.78 0.000 Intergenic AluSz|SINE|Alu -6635 NR_046369 100131626 Hs.721614 NR_046369 LOC100131626 - uncharacterized LOC100131626 ncRNA chr22-3774 chr22 28440790 28441000 + 7.78 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -18974 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr3-6336 chr3 80979808 80980018 + 7.78 0.000 Intergenic Intergenic -13955 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr11-7796 chr11 98374404 98374614 + 7.78 0.000 Intergenic Intergenic -646440 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr14-3138 chr14 68261167 68261377 + 7.78 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 367515 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr8-4927 chr8 101470436 101470646 + 7.78 0.000 Intergenic Intergenic -21898 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr6-3482 chr6 7542517 7542727 + 7.78 0.000 intron (NM_001008844, intron 1 of 23) CpG 951 NM_001008844 1832 Hs.519873 NM_004415 ENSG00000096696 DSP DCWHKTA|DP desmoplakin protein-coding chr9-5118 chr9 35923724 35923934 + 7.78 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 14339 NM_001348107 158376 Hs.302677 NM_001348107 ENSG00000235387 SPAAR LINC00961|SPAR small regulatory polypeptide of amino acid response protein-coding chr2-10675 chr2 23850587 23850797 + 7.78 0.000 intron (NR_125717, intron 13 of 28) L1MC2|LINE|L1 76431 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr2-5564 chr2 169095733 169095943 + 7.78 0.000 3' UTR (NM_001289763, exon 5 of 5) 3' UTR (NM_001289763, exon 5 of 5) 14731 NM_001142271 10170 Hs.179608 NM_005771 ENSG00000073737 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase 9 protein-coding chr1-7267 chr1 232477808 232478018 + 7.78 0.000 intron (NM_020808, intron 5 of 20) intron (NM_020808, intron 5 of 20) 37695 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr2-7536 chr2 22349574 22349784 + 7.78 0.000 Intergenic Intergenic -186800 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr2-12449 chr2 59024268 59024478 + 7.78 0.000 intron (NR_033873, intron 10 of 13) intron (NR_033873, intron 10 of 13) -193335 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr22-3544 chr22 16636955 16637165 + 7.78 0.000 non-coding (NR_001591, exon 5 of 9) non-coding (NR_001591, exon 5 of 9) 35149 NR_001591 387590 Hs.474116 NR_001591 ENSG00000100181 TPTEP1 psiTPTE22 TPTE pseudogene 1 pseudo chr7-9731 chr7 157291732 157291942 + 7.78 0.000 Intergenic Intergenic -45167 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr5-8199 chr5 106812222 106812432 + 7.78 0.000 Intergenic L1PA5|LINE|L1 198687 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr20-1604 chr20 7195843 7196053 + 7.78 0.000 intron (NR_110609, intron 3 of 7) intron (NR_110609, intron 3 of 7) 58254 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA chr1-13703 chr1 14538214 14538424 + 7.78 0.000 Intergenic Intergenic -60366 NM_201628 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr21-1006 chr21 16398772 16398982 + 7.78 0.000 intron (NR_136543, intron 3 of 4) intron (NR_136543, intron 3 of 4) -20326 NR_136546 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr1-15838 chr1 180255836 180256046 + 7.78 0.000 intron (NM_033343, intron 2 of 5) intron (NM_033343, intron 2 of 5) 18740 NR_037642 100527964 Hs.496545 NR_037642 ENSG00000230124 LHX4-AS1 - LHX4 antisense RNA 1 ncRNA chrX-3796 chrX 138801663 138801873 + 7.78 0.000 intron (NM_001139498, intron 2 of 5) L1PA8|LINE|L1 -62415 NM_033642 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr5-4623 chr5 32928903 32929113 + 7.78 0.000 Intergenic LTR104_Mam|LTR|Gypsy -18435 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr22-2679 chr22 37034882 37035092 + 7.78 0.000 Intergenic Intergenic -14804 NM_001270483 7263 Hs.474783 NM_003312 ENSG00000128311 TST RDS thiosulfate sulfurtransferase protein-coding chrX-4821 chrX 101927002 101927212 + 7.78 0.000 intron (NM_001011657, intron 1 of 6) intron (NM_001011657, intron 1 of 6) 4920 NM_001282400 84460 Hs.496512 NM_001011657 ENSG00000166432 ZMAT1 - zinc finger matrin-type 1 protein-coding chr1-6395 chr1 10707585 10707795 + 7.78 0.000 intron (NM_001079843, intron 2 of 20) intron (NM_001079843, intron 2 of 20) 88956 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr5-4358 chr5 168866265 168866475 + 7.78 0.000 intron (NM_003062, intron 5 of 35) intron (NM_003062, intron 5 of 35) -98115 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr4-4048 chr4 3192924 3193134 + 7.78 0.000 intron (NM_002111, intron 40 of 66) intron (NM_002111, intron 40 of 66) -51340 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chrX-4395 chrX 51951205 51951415 + 7.78 0.000 Intergenic L1MCa|LINE|L1 57687 NM_006986 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr1-8707 chr1 227947826 227948036 + 7.78 0.000 promoter-TSS (NM_003395) promoter-TSS (NM_003395) 1 NM_003395 7483 Hs.149504 NM_003395 ENSG00000143816 WNT9A WNT14 Wnt family member 9A protein-coding chr17-7327 chr17 5406235 5406445 + 7.78 0.000 intron (NM_002532, intron 5 of 16) intron (NM_002532, intron 5 of 16) -13301 NM_001160244 84268 Hs.462086 NM_032308 ENSG00000129197 RPAIN HRIP|RIP RPA interacting protein protein-coding chr8-2149 chr8 31208454 31208664 + 7.78 0.000 Intergenic AluSx|SINE|Alu -175203 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr5-7798 chr5 64874754 64874964 + 7.78 0.000 intron (NM_005869, intron 10 of 13) L1MEd|LINE|L1 105929 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr6-7415 chr6 52558141 52558351 + 7.78 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 18814 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr3-9774 chr3 70902128 70902338 + 7.78 0.000 Intergenic L1MD2|LINE|L1 162691 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr4-8714 chr4 183158185 183158395 + 7.78 0.000 intron (NM_024949, intron 1 of 22) MLT1B|LTR|ERVL-MaLR 59033 NM_024949 80014 Hs.333179 NM_024949 ENSG00000151718 WWC2 BOMB WW and C2 domain containing 2 protein-coding chr3-10084 chr3 109297615 109297825 + 7.78 0.000 intron (NM_138815, intron 8 of 8) L1MC2|LINE|L1 18797 NM_138815 151871 Hs.351113 NM_138815 ENSG00000163530 DPPA2 CT100|ECAT15-2|PESCRG1 developmental pluripotency associated 2 protein-coding chr7-1673 chr7 109139570 109139780 + 7.78 0.000 Intergenic AluY|SINE|Alu -255088 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr3-4096 chr3 105579494 105579704 + 7.78 0.000 Intergenic Intergenic 212690 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr10-9128 chr10 127741767 127741977 + 7.78 0.000 TTS (NM_207426) TTS (NM_207426) 4687 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr5-6778 chr5 89499007 89499217 + 7.78 0.000 Intergenic Intergenic 517608 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr16-5024 chr16 50385092 50385302 + 7.78 0.000 Intergenic MER96|DNA|hAT-Tip100 9936 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA chr16-6870 chr16 84058521 84058731 + 7.78 0.000 intron (NM_003791, intron 21 of 22) intron (NM_003791, intron 21 of 22) -16469 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr16-2538 chr16 12160170 12160380 + 7.78 0.000 intron (NM_032167, intron 13 of 20) intron (NM_032167, intron 13 of 20) 183541 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr2-7290 chr2 236354838 236355048 + 7.78 0.000 intron (NR_073043, intron 15 of 19) intron (NR_073043, intron 15 of 19) -90598 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr3-3627 chr3 106628828 106629038 + 7.78 0.000 Intergenic MER70A|LTR|ERVL 611705 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr17-5823 chr17 65225043 65225253 + 7.78 0.000 exon (NM_001081955, exon 18 of 19) exon (NM_001081955, exon 18 of 19) 87778 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr15-4637 chr15 63242733 63242943 + 7.78 0.000 intron (NM_016530, intron 1 of 7) MER1A|DNA|hAT-Charlie -34712 NM_001145646 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chr12-6253 chr12 42168706 42168916 + 7.78 0.000 intron (NM_001190977, intron 1 of 2) intron (NM_001190977, intron 1 of 2) -23937 NM_173601 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr2-13125 chr2 116481399 116481609 + 7.78 0.000 Intergenic Intergenic 1137689 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr17-5833 chr17 66643765 66643975 + 7.78 0.000 intron (NM_002737, intron 4 of 16) intron (NM_002737, intron 4 of 16) -143202 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr10-7389 chr10 3157582 3157792 + 7.78 0.000 intron (NM_001347728, intron 11 of 26) AluJr|SINE|Alu 15029 NM_001347729 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding chr3-10882 chr3 170004507 170004717 + 7.78 0.000 Intergenic L1PA6|LINE|L1 -33383 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr10-5101 chr10 47455409 47455619 + 7.78 0.000 Intergenic Intergenic 28601 NM_001040084 653145 Hs.535306 NM_001040084 ENSG00000265190 ANXA8 ANX8|CH17-360D5.2 annexin A8 protein-coding chr12-3688 chr12 133235859 133236069 + 7.78 0.000 promoter-TSS (NM_001191054) promoter-TSS (NM_001191054) -128 NM_001191054 647589 Hs.703008 NM_001191054 ENSG00000227059 ANHX - anomalous homeobox protein-coding chr6-2303 chr6 107179115 107179325 + 7.78 0.000 intron (NM_020381, intron 7 of 7) intron (NM_020381, intron 7 of 7) -63705 NM_001367314 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chrX-4803 chrX 100103935 100104145 + 7.78 0.000 Intergenic Intergenic 306233 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr9-2533 chr9 125298336 125298546 + 7.78 0.000 intron (NM_001354299, intron 4 of 28) intron (NM_001354299, intron 4 of 28) 36615 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr10-7506 chr10 12845174 12845384 + 7.78 0.000 Intergenic Intergenic -119926 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr16-5255 chr16 50111169 50111379 + 7.78 0.000 Intergenic AluJo|SINE|Alu -41637 NM_001040285 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr10-5951 chr10 122148695 122148905 + 7.78 0.000 intron (NM_206862, intron 7 of 22) intron (NM_206862, intron 7 of 22) -14830 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr3-11255 chr3 197343645 197343855 + 7.78 0.000 Intergenic Intergenic -44429 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr17-7060 chr17 64079539 64079749 + 7.78 0.000 intron (NM_001433, intron 4 of 21) intron (NM_001433, intron 4 of 21) 50500 NM_001433 2081 Hs.133982 NM_001433 ENSG00000178607 ERN1 IRE1|IRE1P|IRE1a|hIRE1p endoplasmic reticulum to nucleus signaling 1 protein-coding chr7-6400 chr7 153917061 153917271 + 7.78 0.000 intron (NR_157195, intron 1 of 24) intron (NR_157195, intron 1 of 24) 29832 NM_001039350 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr22-2118 chr22 31272823 31273033 + 7.78 0.000 intron (NM_001031801, intron 12 of 14) intron (NM_001031801, intron 12 of 14) 19560 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr12-2207 chr12 42147525 42147735 + 7.78 0.000 Intergenic AluSc8|SINE|Alu -2756 NM_173601 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr17-7599 chr17 21686992 21687202 + 7.78 0.000 Intergenic Intergenic -5426 NM_001194958 100134444 Hs.200629 NM_001194958 ENSG00000260458 KCNJ18 KIR2.6|TTPP2 potassium voltage-gated channel subfamily J member 18 protein-coding chrX-4653 chrX 80181574 80181784 + 7.78 0.000 Intergenic MER66-int|LTR|ERV1 153639 NR_110646 101060146 Hs.546064 NR_110646 ENSG00000278530 CHMP1B2P - charged multivesicular body protein 1B2, pseudogene pseudo chrX-3335 chrX 130495592 130495802 + 7.78 0.000 non-coding (NR_027141, exon 1 of 1) non-coding (NR_027141, exon 1 of 1) 756 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr2-12298 chr2 46739720 46739930 + 7.78 0.000 intron (NM_144949, intron 1 of 1) L1ME3B|LINE|L1 40530 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr5-3104 chr5 45639811 45640021 + 7.78 0.000 intron (NM_021072, intron 2 of 7) intron (NM_021072, intron 2 of 7) 56464 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr15-2062 chr15 59791801 59792011 + 7.78 0.000 Intergenic MER52A|LTR|ERV1 -102586 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr2-7899 chr2 55409395 55409605 + 7.78 0.000 intron (NM_001254943, intron 2 of 33) L2c|LINE|L2 10356 NM_018084 55704 Hs.292925 NM_018084 ENSG00000115355 CCDC88A APE|GIRDIN|GIV|GRDN|HkRP1|KIAA1212|PEHO|PEHOL coiled-coil domain containing 88A protein-coding chr4-7785 chr4 96417900 96418110 + 7.78 0.000 intron (NR_147149, intron 1 of 3) intron (NR_147149, intron 1 of 3) 107302 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr8-4425 chr8 109540696 109540906 + 7.78 0.000 intron (NM_001278938, intron 1 of 6) intron (NM_001278938, intron 1 of 6) 175 NM_001278938 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding chr10-4983 chr10 30786195 30786405 + 7.78 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 63081 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr8-6569 chr8 69800926 69801136 + 7.78 0.000 intron (NM_001146009, intron 1 of 7) intron (NM_001146009, intron 1 of 7) 32138 NM_001146009 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr6-6479 chr6 111576522 111576732 + 7.78 0.000 non-coding (NR_034110, exon 3 of 3) non-coding (NR_034110, exon 3 of 3) -9348 NM_001164283 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr5-7389 chr5 22950990 22951200 + 7.78 0.000 Intergenic AluY|SINE|Alu -97751 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr22-2787 chr22 41894752 41894962 + 7.78 0.000 exon (NM_004599, exon 13 of 19) exon (NM_004599, exon 13 of 19) -6087 NR_029507 407039 NR_029507 ENSG00000207932 MIR33A MIR33|MIRN33|MIRN33A|hsa-mir-33|hsa-mir-33a|miR-33|miRNA33A|mir-33a microRNA 33a ncRNA chr20-3010 chr20 48245757 48245967 + 7.78 0.000 Intergenic L2|LINE|L2 -114049 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr3-6671 chr3 130293384 130293594 + 7.78 0.000 Intergenic Intergenic -52027 NM_001278298 256076 Hs.205403 NM_153264 ENSG00000172752 COL6A5 COL29A1|VWA4 collagen type VI alpha 5 chain protein-coding chr9-6423 chr9 70531411 70531621 + 7.78 0.000 3' UTR (NM_024971, exon 26 of 26) 3' UTR (NM_024971, exon 26 of 26) -116859 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr11-5417 chr11 68452196 68452406 + 7.78 0.000 Intergenic AluSx1|SINE|Alu -8451 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr12-4656 chr12 46160691 46160901 + 7.78 0.000 Intergenic Intergenic 105720 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr3-7770 chr3 70592161 70592371 + 7.78 0.000 Intergenic Intergenic -279628 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chrX-2147 chrX 34918226 34918436 + 7.78 0.000 Intergenic L3|LINE|CR1 -24465 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr16-6893 chr16 84660297 84660507 + 7.78 0.000 intron (NM_024731, intron 4 of 4) intron (NM_024731, intron 4 of 4) 11891 NM_024731 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr6-4365 chr6 20540810 20541020 + 7.78 0.000 intron (NM_017774, intron 2 of 15) L2a|LINE|L2 6458 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr9-5146 chr9 37763835 37764045 + 7.78 0.000 intron (NR_104612, intron 4 of 8) intron (NR_104612, intron 4 of 8) 10135 NM_001286954 158234 Hs.655614 NM_144964 ENSG00000165275 TRMT10B RG9MTD3|bA3J10.9 tRNA methyltransferase 10B protein-coding chr13-2805 chr13 102137489 102137699 + 7.78 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) -91590 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr10-3960 chr10 108582574 108582784 + 7.78 0.000 Intergenic MIR|SINE|MIR -513386 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr1-13945 chr1 24103031 24103241 + 7.78 0.000 intron (NM_152372, intron 5 of 36) intron (NM_152372, intron 5 of 36) 8999 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr3-5305 chr3 126526761 126526971 + 7.78 0.000 TTS (NR_130715) TTS (NR_130715) 2711 NM_152889 166012 Hs.292375 NM_152889 ENSG00000180767 CHST13 C4ST3 carbohydrate sulfotransferase 13 protein-coding chr3-8733 chr3 195924656 195924866 + 7.78 0.000 Intergenic L1ME1|LINE|L1 -15752 NM_005781 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr1-15294 chr1 116679599 116679809 + 7.78 0.000 Intergenic Intergenic 7958 NR_031564 100302117 NR_031564 ENSG00000211543 MIR320B1 MIR320B-1|MIRN320B1|hsa-mir-320b-1|mir-320b-1 microRNA 320b-1 ncRNA chrX-4187 chrX 34721511 34721721 + 7.78 0.000 Intergenic L1PB1|LINE|L1 -64331 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr10-8896 chr10 114314235 114314445 + 7.78 0.000 intron (NM_001001936, intron 6 of 18) intron (NM_001001936, intron 6 of 18) 74726 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr10-4817 chr10 11173958 11174168 + 7.78 0.000 intron (NM_001326339, intron 2 of 11) intron (NM_001326339, intron 2 of 11) 9033 NM_001025076 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr3-5647 chr3 11478511 11478721 + 7.78 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 90182 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr22-2739 chr22 39557360 39557570 + 7.78 0.000 Intergenic CpG -13288 NM_021096 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr3-6898 chr3 156244286 156244496 + 7.78 0.000 intron (NM_003471, intron 1 of 13) MLT1D|LTR|ERVL-MaLR -16508 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr1-13229 chr1 215570964 215571174 + 7.78 0.000 intron (NM_001319294, intron 1 of 17) intron (NM_001319294, intron 1 of 17) 3765 NM_001319294 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr13-3501 chr13 20699869 20700079 + 7.78 0.000 Intergenic AluSx|SINE|Alu -3369 NM_138284 53342 Hs.655142 NM_138284 ENSG00000172458 IL17D IL-17D interleukin 17D protein-coding chr8-3861 chr8 35341724 35341934 + 7.78 0.000 intron (NM_080872, intron 1 of 16) intron (NM_080872, intron 1 of 16) 106354 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chrX-4342 chrX 47054398 47054608 + 7.78 0.000 exon (NM_014735, exon 9 of 11) exon (NM_014735, exon 9 of 11) -23852 NM_004683 9104 Hs.77854 NM_004683 ENSG00000130988 RGN GNL|HEL-S-41|RC|SMP30 regucalcin protein-coding chr6-7727 chr6 90044990 90045200 + 7.78 0.000 intron (NM_021813, intron 5 of 8) intron (NM_021813, intron 5 of 8) 150626 NM_032602 84694 Hs.334499 NM_032602 ENSG00000135355 GJA10 CX62 gap junction protein alpha 10 protein-coding chr18-3123 chr18 37550607 37550817 + 7.78 0.000 intron (NM_001353701, intron 1 of 1) intron (NM_001353701, intron 1 of 1) 15086 NM_001353752 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr2-5568 chr2 170098807 170099017 + 7.78 0.000 Intergenic L1MC4a|LINE|L1 -79235 NR_045684 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr7-5458 chr7 39923025 39923235 + 7.78 0.000 Intergenic Intergenic 26289 NR_158201 112267983 Hs.587424 NR_158201 LOC112267983 - uncharacterized LOC112267983 ncRNA chr22-1859 chr22 38831235 38831445 + 7.78 0.000 intron (NM_014293, intron 1 of 4) AluJb|SINE|Alu 12688 NM_014293 23467 Hs.91622 NM_014293 ENSG00000221890 NPTXR NPR neuronal pentraxin receptor protein-coding chr12-7322 chr12 54591053 54591263 + 7.78 0.000 Intergenic Intergenic -2499 NM_006741 5502 Hs.505662 NM_006741 ENSG00000135447 PPP1R1A I1|IPP1 protein phosphatase 1 regulatory inhibitor subunit 1A protein-coding GL000194.1-7 GL000194.1 83777 83987 + 7.78 0.000 NA NA NA NA chr16-3951 chr16 86356414 86356624 + 7.78 0.000 Intergenic Intergenic -10840 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr3-10617 chr3 145727740 145727950 + 7.78 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 341340 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr11-9266 chr11 44268811 44269021 + 7.78 0.000 intron (NM_021926, intron 2 of 3) intron (NM_021926, intron 2 of 3) 41223 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr11-4138 chr11 45045956 45046166 + 7.78 0.000 Intergenic Intergenic -47952 NM_001359633 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr4-8565 chr4 166743872 166744082 + 7.78 0.000 intron (NM_001040159, intron 8 of 10) L1PA5|LINE|L1 490449 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr17-4095 chr17 80632159 80632369 + 7.78 0.000 intron (NM_020761, intron 2 of 33) intron (NM_020761, intron 2 of 33) 87426 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr18-1698 chr18 525299 525509 + 7.78 0.000 Intergenic Intergenic -10110 NR_136505 105376854 NR_136505 ENSG00000264265 LINC01925 - long intergenic non-protein coding RNA 1925 ncRNA chrX-1919 chrX 150923291 150923501 + 7.78 0.000 Intergenic AluJo|SINE|Alu -24580 NM_001242614 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr13-2101 chr13 80452663 80452873 + 7.78 0.000 Intergenic L1MA5|LINE|L1 -111642 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr9-4874 chr9 3650043 3650253 + 7.78 0.000 Intergenic MER5A|DNA|hAT-Charlie -17938 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chr9-4846 chr9 558330 558540 + 7.78 0.000 intron (NM_001256877, intron 2 of 12) Tigger17a|DNA|TcMar-Tigger 53880 NM_001354331 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr1-15747 chr1 171873155 171873365 + 7.78 0.000 intron (NM_001278252, intron 1 of 14) MIRb|SINE|MIR 9068 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 - DNM3 intronic transcript 1 ncRNA chr16-6557 chr16 65283591 65283801 + 7.78 0.000 TTS (NR_027755) TTS (NR_027755) -107123 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr9-7368 chr9 16720453 16720663 + 7.78 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -6256 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr3-10983 chr3 178527783 178527993 + 7.78 0.000 intron (NR_126561, intron 5 of 5) intron (NR_126561, intron 5 of 5) -8548 NM_181361 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr20-1356 chr20 34791286 34791496 + 7.78 0.000 intron (NM_001318240, intron 3 of 15) intron (NM_001318240, intron 3 of 15) -8987 NM_001242539 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding chr3-9574 chr3 54296655 54296865 + 7.78 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 174208 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr4-3135 chr4 173633486 173633696 + 7.78 0.000 Intergenic Intergenic 103133 NR_003679 79804 Hs.61435 NR_003679 ENSG00000237125 HAND2-AS1 DEIN|NBLA00301|UPH HAND2 antisense RNA 1 ncRNA chr1-16004 chr1 197891184 197891394 + 7.78 0.000 Intergenic L1ME3E|LINE|L1 -11341 NM_001024594 388722 Hs.61329 NM_001024594 ENSG00000203724 C1orf53 - chromosome 1 open reading frame 53 protein-coding chr9-6276 chr9 132227481 132227691 + 7.78 0.000 intron (NM_032536, intron 4 of 7) intron (NM_032536, intron 4 of 7) 65528 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr7-8564 chr7 61091020 61091230 + 7.78 0.000 Intergenic Intergenic 2212931 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr20-2666 chr20 44911640 44911850 + 7.78 0.000 intron (NM_001124756, intron 1 of 14) intron (NM_001124756, intron 1 of 14) 1685 NM_001124756 80336 Hs.641481 NM_001124756 ENSG00000101104 PABPC1L C20orf119|EPAB|PABPC1L1|dJ1069P2.3 poly(A) binding protein cytoplasmic 1 like protein-coding chr2-9283 chr2 221774779 221774989 + 7.78 0.000 Intergenic Intergenic -200682 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr5-8872 chr5 154591031 154591241 + 7.78 0.000 Intergenic Intergenic 4936 NR_036094 100422950 NR_036094 ENSG00000264760 MIR3141 mir-3141 microRNA 3141 ncRNA chr13-2317 chr13 32528538 32528748 + 7.78 0.000 intron (NM_001278432, intron 2 of 9) intron (NM_001278432, intron 2 of 9) 10152 NM_001320836 10443 Hs.507680 NM_014887 ENSG00000244754 N4BP2L2 92M18.3|CG005|CG016|PFAAP5 NEDD4 binding protein 2 like 2 protein-coding chr13-2666 chr13 83368822 83369032 + 7.78 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 513466 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr19-3026 chr19 51988608 51988818 + 7.78 0.000 Intergenic Intergenic -1873 NM_021632 59348 Hs.407694 NM_021632 ENSG00000256683 ZNF350 ZBRK1|ZFQR zinc finger protein 350 protein-coding chr4-5275 chr4 174593001 174593211 + 7.78 0.000 Intergenic Intergenic -70208 NM_001145816 3248 Hs.596913 NM_000860 ENSG00000164120 HPGD 15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1 15-hydroxyprostaglandin dehydrogenase protein-coding chrX-1980 chrX 11285482 11285692 + 7.78 0.000 intron (NM_006125, intron 1 of 10) intron (NM_006125, intron 1 of 10) -7826 NM_001142 265 Hs.654436 NM_001142 ENSG00000125363 AMELX AI1E|AIH1|ALGN|AMG|AMGL|AMGX amelogenin X-linked protein-coding chr8-4931 chr8 103104348 103104558 + 7.78 0.000 Intergenic Intergenic -16579 NR_145429 379034 Hs.591862 NR_145429 LINC01181 - long intergenic non-protein coding RNA 1181 ncRNA chr4-8494 chr4 159942310 159942520 + 7.78 0.000 Intergenic Intergenic -164631 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr19-4605 chr19 12921172 12921382 + 7.78 0.000 TTS (NR_049880) TTS (NR_049880) 957 NR_049880 100847016 NR_049880 ENSG00000266721 MIR5695 - microRNA 5695 ncRNA chr14-5043 chr14 80847973 80848183 + 7.78 0.000 intron (NM_152446, intron 9 of 24) L2a|LINE|L2 93660 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr6-3934 chr6 83868731 83868941 + 7.78 0.000 intron (NM_016230, intron 2 of 15) intron (NM_016230, intron 2 of 15) 9147 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding chr9-3636 chr9 92138133 92138343 + 7.78 0.000 intron (NR_015444, intron 12 of 12) intron (NR_015444, intron 12 of 12) -3229 NR_027341 158314 Hs.149940 NR_027341 LINC00475 C9orf44 long intergenic non-protein coding RNA 475 ncRNA chr15-3365 chr15 84858301 84858511 + 7.78 0.000 exon (NM_020778, exon 6 of 14) exon (NM_020778, exon 6 of 14) -26255 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr8-2583 chr8 47524397 47524607 + 7.78 0.000 intron (NM_001352958, intron 10 of 21) intron (NM_001352958, intron 10 of 21) -129586 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr2-4116 chr2 152647706 152647916 + 7.78 0.000 exon (NM_052905, exon 26 of 26) exon (NM_052905, exon 26 of 26) 69650 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr10-4863 chr10 15334082 15334292 + 7.78 0.000 intron (NM_001010924, intron 1 of 7) intron (NM_001010924, intron 1 of 7) 37102 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr14-5074 chr14 84409614 84409824 + 7.78 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -862213 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr6-7946 chr6 111294379 111294589 + 7.78 0.000 Intergenic L2b|LINE|L2 35145 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr3-5333 chr3 131610068 131610278 + 7.78 0.000 intron (NM_130808, intron 7 of 15) L2b|LINE|L2 -107202 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr1-8167 chr1 17564049 17564259 + 7.78 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) -16399 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chrX-2299 chrX 53265873 53266083 + 7.78 0.000 TTS (NM_001243197) TTS (NM_001243197) 15606 NM_001243197 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr8-5066 chr8 32578260 32578470 + 7.78 0.000 intron (NM_013960, intron 1 of 12) Tigger9a|DNA|TcMar-Tigger -17461 NM_001159995 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr20-2478 chr20 32640939 32641149 + 7.78 0.000 intron (NM_182584, intron 4 of 5) AluJr|SINE|Alu 32897 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr16-4354 chr16 35348415 35348625 + 7.78 0.000 Intergenic Intergenic -14896 NR_027080 283914 Hs.385772 NR_027079 ENSG00000259841 LINC01566 - long intergenic non-protein coding RNA 1566 ncRNA chr10-3373 chr10 21989461 21989671 + 7.78 0.000 intron (NM_022365, intron 1 of 11) L1MEi|LINE|L1 14164 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr5-2287 chr5 42909044 42909254 + 7.78 0.000 Intergenic MER1B|DNA|hAT-Charlie 84184 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr11-10268 chr11 102791188 102791398 + 7.78 0.000 intron (NM_001145938, intron 8 of 9) intron (NM_001145938, intron 8 of 9) 6867 NM_001145938 4312 Hs.83169 NM_002421 ENSG00000196611 MMP1 CLG|CLGN matrix metallopeptidase 1 protein-coding chr6-6853 chr6 8789255 8789465 + 7.78 0.000 Intergenic Intergenic 137151 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr22-2702 chr22 37710700 37710910 + 7.78 0.000 intron (NM_001039141, intron 4 of 23) intron (NM_001039141, intron 4 of 23) 13757 NM_001039141 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr1-9889 chr1 68778639 68778849 + 7.78 0.000 Intergenic Intergenic -277154 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr4-7172 chr4 39971003 39971213 + 7.78 0.000 intron (NM_001100399, intron 2 of 32) intron (NM_001100399, intron 2 of 32) 6803 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr14-4913 chr14 73472059 73472269 + 7.78 0.000 Intergenic MIRb|SINE|MIR -8522 NR_135251 101928143 Hs.654609 NR_135251 ENSG00000284930 LOC101928143 - uncharacterized LOC101928143 ncRNA chr13-2731 chr13 95304616 95304826 + 7.78 0.000 Intergenic Intergenic -3270 NM_001105515 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr1-16562 chr1 234343142 234343352 + 7.78 0.000 Intergenic Intergenic 30156 NR_125962 101927765 Hs.596703 NR_125961 ENSG00000231663 COA6-AS1 - COA6 antisense RNA 1 ncRNA chr2-6292 chr2 57808219 57808429 + 7.78 0.000 Intergenic Intergenic -99327 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr5-4323 chr5 155554596 155554806 + 7.78 0.000 Intergenic MLT1E1|LTR|ERVL-MaLR 540946 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr10-4509 chr10 89333491 89333701 + 7.78 0.000 intron (NM_001031683, intron 1 of 1) AluJo|SINE|Alu 1067 NM_001289759 3437 Hs.47338 NM_001549 ENSG00000119917 IFIT3 CIG-49|GARG-49|IFI60|IFIT4|IRG2|ISG60|P60|RIG-G|cig41 interferon induced protein with tetratricopeptide repeats 3 protein-coding chr5-2894 chr5 114299798 114300008 + 7.78 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -62167 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr11-5096 chr11 118639770 118639980 + 7.78 0.000 intron (NM_001144759, intron 12 of 20) intron (NM_001144759, intron 12 of 20) -4125 NR_106773 102466719 NR_106773 ENSG00000284246 MIR6716 hsa-mir-6716 microRNA 6716 ncRNA chr7-3891 chr7 111833509 111833719 + 7.78 0.000 intron (NM_001363540, intron 26 of 52) intron (NM_001363540, intron 26 of 52) 25109 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr11-2637 chr11 34512981 34513191 + 7.78 0.000 intron (NM_001422, intron 1 of 6) intron (NM_001422, intron 1 of 6) 708 NM_001422 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr15-3278 chr15 77419336 77419546 + 7.78 0.000 intron (NM_024776, intron 1 of 7) CpG 663 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding chr13-2095 chr13 77291173 77291383 + 7.78 0.000 intron (NM_015057, intron 2 of 82) L1ME2|LINE|L1 35816 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr1-12299 chr1 237376393 237376603 + 7.78 0.000 intron (NM_001035, intron 7 of 104) L2a|LINE|L2 -94621 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr4-4226 chr4 16247776 16247986 + 7.78 0.000 intron (NR_027697, intron 2 of 2) intron (NR_027697, intron 2 of 2) 21218 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr2-5344 chr2 88575446 88575656 + 7.78 0.000 TTS (NR_110236) TTS (NR_110236) 36831 NR_110236 101928371 Hs.738045 NR_110236 ENSG00000225420 LOC101928371 - uncharacterized LOC101928371 ncRNA chr15-3753 chr15 62572140 62572350 + 7.78 0.000 Intergenic AluJo|SINE|Alu 72936 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr5-4742 chr5 50495270 50495480 + 7.78 0.000 Intergenic L1P1|LINE|L1 -54087 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr7-6314 chr7 140673656 140673866 + 7.78 0.000 exon (NM_052853, exon 1 of 8) exon (NM_052853, exon 1 of 8) 816 NM_052853 90956 Hs.744886 NM_052853 ENSG00000133597 ADCK2 AARF aarF domain containing kinase 2 protein-coding chr3-5667 chr3 12621346 12621556 + 7.78 0.000 intron (NR_148942, intron 1 of 16) intron (NR_148942, intron 1 of 16) 42057 NM_001354690 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr2-5959 chr2 42975256 42975466 + 7.78 0.000 Intergenic Intergenic 64182 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr1-12898 chr1 112762902 112763112 + 7.78 0.000 Intergenic Intergenic 42440 NM_182759 284467 Hs.439116 NM_182759 ENSG00000184599 TAFA3 FAM19A3|TAFA-3 TAFA chemokine like family member 3 protein-coding chr9-4739 chr9 130110712 130110922 + 7.78 0.000 intron (NM_001136558, intron 15 of 18) intron (NM_001136558, intron 15 of 18) 33402 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr19-4248 chr19 54137571 54137781 + 7.78 0.000 promoter-TSS (NM_014516).2 promoter-TSS (NM_014516).2 -86 NM_014516 4849 Hs.343571 NM_014516 ENSG00000088038 CNOT3 LENG2|NOT3|NOT3H CCR4-NOT transcription complex subunit 3 protein-coding KI270519.1-5 KI270519.1 114274 114484 + 7.78 0.000 NA NA NA NA chr20-2640 chr20 43506623 43506833 + 7.78 0.000 promoter-TSS (NM_032107) promoter-TSS (NM_032107) -969 NM_032107 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chr7-3994 chr7 138980509 138980719 + 7.78 0.000 intron (NM_020910, intron 1 of 19) intron (NM_020910, intron 1 of 19) 775 NM_001164665 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr16-6005 chr16 8155003 8155213 + 7.78 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 434730 NM_001290095 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr22-3659 chr22 22785883 22786093 + 7.78 0.000 Intergenic Intergenic -36788 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr6-4842 chr6 85421406 85421616 + 7.78 0.000 Intergenic Intergenic -16709 NR_134633 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr11-8044 chr11 22641199 22641409 + 7.78 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -15463 NM_022725 2188 Hs.632151 NM_022725 ENSG00000183161 FANCF FAF FA complementation group F protein-coding chr3-5943 chr3 45297852 45298062 + 7.78 0.000 Intergenic Intergenic -71670 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr12-2347 chr12 6605720 6605930 + 7.78 0.000 intron (NM_001273, intron 2 of 39) intron (NM_001273, intron 2 of 39) 626 NM_001297553 1108 Hs.162233 NM_001273 ENSG00000111642 CHD4 CHD-4|Mi-2b|Mi2-BETA|SIHIWES chromodomain helicase DNA binding protein 4 protein-coding chr10-7911 chr10 50612687 50612897 + 7.78 0.000 intron (NM_147156, intron 1 of 10) AluSx|SINE|Alu 11164 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chrX-1773 chrX 69165479 69165689 + 7.78 0.000 promoter-TSS (NM_001032396) promoter-TSS (NM_001032396) -131 NM_001032396 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr15-3210 chr15 72913166 72913376 + 7.78 0.000 Intergenic L1ME4a|LINE|L1 -129513 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr19-2955 chr19 8651995 8652205 + 7.78 0.000 Intergenic MER97b|DNA|hAT-Tip100 -41385 NM_030957 81794 Hs.657508 NM_030957 ENSG00000142303 ADAMTS10 ADAM-TS10|ADAMTS-10|WMS|WMS1 ADAM metallopeptidase with thrombospondin type 1 motif 10 protein-coding chr10-7134 chr10 100618889 100619099 + 7.78 0.000 Intergenic Intergenic 83051 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr11-4061 chr11 17396731 17396941 + 7.78 0.000 intron (NR_147094, intron 32 of 37) intron (NR_147094, intron 32 of 37) -7490 NM_001166290 3767 Hs.248141 NM_000525 ENSG00000187486 KCNJ11 BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3 potassium voltage-gated channel subfamily J member 11 protein-coding chr2-13983 chr2 190019826 190020036 + 7.78 0.000 Intergenic L1MA7|LINE|L1 42798 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr4-7361 chr4 58606678 58606888 + 7.78 0.000 Intergenic Intergenic -70455 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr1-14226 chr1 35956827 35957037 + 7.78 0.000 intron (NM_177422, intron 2 of 16) AluSx|SINE|Alu 25827 NM_177422 192669 Hs.657659 NM_024852 ENSG00000126070 AGO3 EIF2C3 argonaute RISC catalytic component 3 protein-coding chr14-5084 chr14 86355404 86355614 + 7.78 0.000 Intergenic Intergenic 420831 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr1-16516 chr1 230572602 230572812 + 7.78 0.000 Intergenic MER4D|LTR|ERV1 22876 NR_146479 101927553 Hs.680219 NR_146479 ENSG00000232964 LINC01737 - long intergenic non-protein coding RNA 1737 ncRNA chr10-3236 chr10 110644287 110644497 + 7.78 0.000 promoter-TSS (NM_001134363) promoter-TSS (NM_001134363) 56 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr17-7355 chr17 6789842 6790052 + 7.78 0.000 Intergenic Intergenic 13732 NM_153230 162517 Hs.368364 NM_153230 ENSG00000177294 FBXO39 CT144|Fbx39 F-box protein 39 protein-coding chrX-1542 chrX 42077771 42077981 + 7.78 0.000 Intergenic MST-int|LTR|ERVL-MaLR -154322 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr7-9031 chr7 101571687 101571897 + 7.78 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -2786 NR_103749 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr5-4248 chr5 135964855 135965065 + 7.78 0.000 Intergenic Intergenic -9977 NM_002302 3950 Hs.512580 NM_002302 ENSG00000145826 LECT2 chm-II|chm2 leukocyte cell derived chemotaxin 2 protein-coding chr10-5695 chr10 100118772 100118982 + 7.78 0.000 Intergenic Intergenic -37008 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chr15-5110 chr15 89308368 89308578 + 7.78 0.000 intron (NM_001113378, intron 34 of 37) intron (NM_001113378, intron 34 of 37) 18337 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr18-3391 chr18 60553163 60553373 + 7.78 0.000 Intergenic MER52C|LTR|ERV1 -180493 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr9-6724 chr9 7844306 7844516 + 7.78 0.000 Intergenic MER102b|DNA|hAT-Charlie -44633 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr11-4036 chr11 11027217 11027427 + 7.78 0.000 Intergenic Intergenic 169105 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr16-5201 chr16 12472877 12473087 + 7.78 0.000 intron (NM_032167, intron 18 of 20) intron (NM_032167, intron 18 of 20) -247339 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr6-4133 chr6 163793644 163793854 + 7.78 0.000 Intergenic MER110-int|LTR|ERV1 -122265 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr22-3091 chr22 45500026 45500236 + 7.78 0.000 Intergenic L2b|LINE|L2 -2752 NM_006486 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr18-2758 chr18 318885 319095 + 7.78 0.000 3' UTR (NM_130386, exon 10 of 10) 3' UTR (NM_130386, exon 10 of 10) -50943 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chrX-1475 chrX 119788542 119788752 + 7.78 0.000 intron (NM_001000, intron 2 of 2) AluJb|SINE|Alu -1163 NR_002584 26779 Hs.675255 NR_002584 ENSG00000206622 SNORA69 RNU69|U69|U69A small nucleolar RNA, H/ACA box 69 snoRNA chr5-9156 chr5 176940320 176940530 + 7.78 0.000 intron (NR_146149, intron 10 of 15) LFSINE_Vert|SINE|tRNA -41079 NM_002115 3101 Hs.411695 NM_002115 ENSG00000160883 HK3 HKIII|HXK3 hexokinase 3 protein-coding chr5-4327 chr5 157210043 157210253 + 7.78 0.000 intron (NM_005546, intron 2 of 16) AluSg|SINE|Alu 29252 NM_005546 3702 Hs.558348 NM_005546 ENSG00000113263 ITK EMT|LPFS1|LYK|PSCTK2 IL2 inducible T cell kinase protein-coding chr4-3363 chr4 7737442 7737652 + 7.78 0.000 intron (NM_020777, intron 26 of 26) intron (NM_020777, intron 26 of 26) -16543 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr9-8276 chr9 112780559 112780769 + 7.78 0.000 intron (NM_001012994, intron 1 of 8) intron (NM_001012994, intron 1 of 8) 29904 NM_001012994 401548 Hs.522350 NM_001012994 ENSG00000148158 SNX30 ATG24A sorting nexin family member 30 protein-coding chr17-3925 chr17 58061938 58062148 + 7.78 0.000 Intergenic Intergenic 21161 NR_110809 101927666 Hs.552237 NR_110809 ENSG00000266290 LOC101927666 - uncharacterized LOC101927666 ncRNA chr1-11353 chr1 32161044 32161254 + 7.78 0.000 intron (NM_012316, intron 7 of 13) AluJb|SINE|Alu -18526 NM_175852 200081 Hs.17987 NM_175852 ENSG00000084652 TXLNA IL14|TXLN taxilin alpha protein-coding chr21-1001 chr21 15080492 15080702 + 7.78 0.000 Intergenic Intergenic -15597 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr2-12348 chr2 50016464 50016674 + 7.78 0.000 intron (NM_001330093, intron 21 of 22) THE1D|LTR|ERVL-MaLR -42366 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr1-14326 chr1 39818427 39818637 + 7.78 0.000 Intergenic Intergenic 29556 NR_135805 101929536 Hs.552820 NR_135805 ENSG00000261798 LOC101929536 - uncharacterized LOC101929536 ncRNA chr2-8061 chr2 73053782 73053992 + 7.78 0.000 intron (NM_001330406, intron 2 of 14) intron (NM_001330406, intron 2 of 14) 5285 NM_001330411 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr1-4981 chr1 58968642 58968852 + 7.78 0.000 Intergenic Intergenic -51729 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr13-4047 chr13 74556154 74556364 + 7.78 0.000 non-coding (NR_034024, exon 3 of 3) non-coding (NR_034024, exon 3 of 3) 3416 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr1-6552 chr1 30877567 30877777 + 7.78 0.000 intron (NM_014654, intron 2 of 4) intron (NM_014654, intron 2 of 4) 31086 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr11-10567 chr11 122193831 122194041 + 7.78 0.000 intron (NR_137180, intron 2 of 4) intron (NR_137180, intron 2 of 4) 9173 NR_024430 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr9-5886 chr9 131886890 131887100 + 7.78 0.000 intron (NM_001253881, intron 4 of 6) intron (NM_001253881, intron 4 of 6) -147051 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr10-4311 chr10 17516440 17516650 + 7.78 0.000 Intergenic Intergenic -61950 NM_001345961 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr10-4421 chr10 67222752 67222962 + 7.78 0.000 intron (NM_001127384, intron 5 of 17) intron (NM_001127384, intron 5 of 17) 180553 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr8-2545 chr8 28308426 28308636 + 7.78 0.000 Intergenic Intergenic -8737 NM_006228 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr13-2397 chr13 42480111 42480321 + 7.78 0.000 intron (NR_135319, intron 3 of 3) intron (NR_135319, intron 3 of 3) 55324 NR_135319 105370177 NR_135319 ENSG00000283554 LINC02341 - long intergenic non-protein coding RNA 2341 ncRNA chr11-8141 chr11 56393729 56393939 + 7.78 0.000 Intergenic Intergenic 18210 NM_001013356 504189 NM_001013356 OR8U8 - olfactory receptor family 8 subfamily U member 8 protein-coding chr6-2567 chr6 43798754 43798964 + 7.78 0.000 Intergenic Intergenic 26891 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr2-8249 chr2 98867164 98867374 + 7.78 0.000 intron (NM_207362, intron 1 of 9) intron (NM_207362, intron 1 of 9) 68956 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr3-8140 chr3 28753950 28754160 + 7.78 0.000 intron (NR_038840, intron 2 of 4) L1PA11|LINE|L1 178777 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr20-2080 chr20 18372071 18372281 + 7.78 0.000 Intergenic AluSx|SINE|Alu -6873 NR_034167 440757 Hs.120399 NM_001004344 ENSG00000237282 LINC00851 DZANK1-AS1 long intergenic non-protein coding RNA 851 ncRNA chr15-4811 chr15 72954075 72954285 + 7.78 0.000 Intergenic L2b|LINE|L2 -98283 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr2-10743 chr2 34017679 34017889 + 7.78 0.000 intron (NR_126403, intron 4 of 5) intron (NR_126403, intron 4 of 5) -49442 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr7-6886 chr7 68250310 68250520 + 7.78 0.000 Intergenic Intergenic 230162 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr15-3135 chr15 66600281 66600491 + 7.78 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) 18196 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr2-9303 chr2 223052845 223053055 + 7.78 0.000 exon (NM_080671, exon 2 of 2) exon (NM_080671, exon 2 of 2) 1020 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr2-7196 chr2 214504842 214505052 + 7.78 0.000 intron (NM_001080500, intron 3 of 3) intron (NM_001080500, intron 3 of 3) -5235 NR_047698 100885780 Hs.665982 NR_047698 ENSG00000224257 VWC2L-IT1 - VWC2L intronic transcript 1 ncRNA chr1-8555 chr1 165580947 165581157 + 7.78 0.000 intron (NR_026744, intron 1 of 6) intron (NR_026744, intron 1 of 6) 1103 NR_026744 400794 Hs.374847 NR_026744 ENSG00000237463 LRRC52-AS1 - LRRC52 antisense RNA 1 ncRNA chr10-3880 chr10 46018543 46018753 + 7.78 0.000 intron (NM_001145263, intron 1 of 9) Plat_L3|LINE|CR1 889 NM_001145262 8031 Hs.643658 NM_005437 ENSG00000266412 NCOA4 ARA70|ELE1|PTC3|RFG nuclear receptor coactivator 4 protein-coding chr19-3554 chr19 45659079 45659289 + 7.78 0.000 Intergenic Intergenic -9037 NM_000164 2696 Hs.251412 NM_000164 ENSG00000010310 GIPR PGQTL2 gastric inhibitory polypeptide receptor protein-coding chrX-527 chrX 52920712 52920922 + 7.78 0.000 Intergenic CpG 21758 NM_001099684 727866 Hs.6451 NM_001099684 ENSG00000179304 FAM156B TMEM29B family with sequence similarity 156 member B protein-coding chr4-4884 chr4 117078915 117079125 + 7.78 0.000 Intergenic L1MC1|LINE|L1 6556 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr11-4910 chr11 62900270 62900480 + 7.78 0.000 Intergenic Intergenic 18676 NR_037193 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr8-5824 chr8 4692857 4693067 + 7.78 0.000 intron (NM_033225, intron 1 of 69) intron (NM_033225, intron 1 of 69) 301952 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr15-2442 chr15 75214297 75214507 + 7.78 0.000 Intergenic Intergenic 12520 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr3-6477 chr3 109855523 109855733 + 7.78 0.000 Intergenic MSTC-int|LTR|ERVL-MaLR 252800 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr5-4019 chr5 33462493 33462703 + 7.78 0.000 intron (NR_047677, intron 15 of 17) intron (NR_047677, intron 15 of 17) 21822 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr1-7439 chr1 48931647 48931857 + 7.78 0.000 intron (NM_001323575, intron 5 of 12) AluJb|SINE|Alu -154783 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr2-11466 chr2 231501912 231502122 + 7.78 0.000 Intergenic AluSc8|SINE|Alu 12322 NR_024079 151477 Hs.375211 NM_173513 ENSG00000181798 LINC00471 C2orf52 long intergenic non-protein coding RNA 471 ncRNA chr11-9962 chr11 76911889 76912099 + 7.78 0.000 intron (NM_001300953, intron 1 of 9) intron (NM_001300953, intron 1 of 9) 51076 NM_001300954 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr5-7206 chr5 7733556 7733766 + 7.78 0.000 intron (NM_020546, intron 14 of 24) L2|LINE|L2 117472 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding chr13-1655 chr13 70306004 70306214 + 7.78 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -197616 NM_001286725 57626 Hs.508201 NM_020866 ENSG00000150361 KLHL1 MRP2 kelch like family member 1 protein-coding chr9-7045 chr9 123314874 123315084 + 7.78 0.000 Intergenic Intergenic -41218 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr16-5156 chr16 2494363 2494573 + 7.78 0.000 intron (NM_020705, intron 1 of 6) intron (NM_020705, intron 1 of 6) -19258 NM_001198569 527 Hs.389107 NM_001694 ENSG00000185883 ATP6V0C ATP6C|ATP6L|ATPL|VATL|VPPC|Vma3 ATPase H+ transporting V0 subunit c protein-coding chr12-2523 chr12 95072956 95073166 + 7.78 0.000 intron (NM_001127362, intron 1 of 11) CpG 557 NM_003297 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding chr22-935 chr22 42971798 42972008 + 7.78 0.000 intron (NM_001184970, intron 1 of 10) SVA_B|Retroposon|SVA -11567 NM_001349970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr1-14598 chr1 54122658 54122868 + 7.78 0.000 Intergenic MIRc|SINE|MIR 30418 NM_001353655 200008 NM_201546 ENSG00000157211 CDCP2 - CUB domain containing protein 2 protein-coding chr22-3304 chr22 17555567 17555777 + 7.78 0.000 3' UTR (NM_001290047, exon 19 of 19) 3' UTR (NM_001290047, exon 19 of 19) -7767 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr12-5399 chr12 121197714 121197924 + 7.78 0.000 Intergenic Intergenic -12310 NM_001261397 5025 Hs.321709 NM_002560 ENSG00000135124 P2RX4 P2X4|P2X4R purinergic receptor P2X 4 protein-coding chr4-4834 chr4 109077535 109077745 + 7.78 0.000 intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 225018 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr21-1485 chr21 38439487 38439697 + 7.78 0.000 intron (NM_001243429, intron 2 of 8) intron (NM_001243429, intron 2 of 8) 58885 NM_182918 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr11-7133 chr11 125743823 125744033 + 7.78 0.000 Intergenic Intergenic -2351 NM_138294 160065 Hs.148565 NM_138294 ENSG00000171053 PATE1 PATE prostate and testis expressed 1 protein-coding chr9-7744 chr9 75455288 75455498 + 7.78 0.000 Intergenic Intergenic 366879 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr2-6720 chr2 28082030 28082240 + 7.78 0.000 intron (NM_199193, intron 7 of 13) intron (NM_199193, intron 7 of 13) 85768 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA chr16-6624 chr16 67927232 67927442 + 7.78 0.000 exon (NM_006742, exon 3 of 3) exon (NM_006742, exon 3 of 3) 4525 NM_001907 1506 Hs.654546 NM_001907 ENSG00000141086 CTRL CTRL1 chymotrypsin like protein-coding chr17-7038 chr17 60902457 60902667 + 7.78 0.000 intron (NM_001330413, intron 10 of 25) intron (NM_001330413, intron 10 of 25) 224711 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr18-2500 chr18 57523817 57524027 + 7.78 0.000 Intergenic L2a|LINE|L2 62780 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr18-3232 chr18 48009780 48009990 + 7.78 0.000 Intergenic MER115|DNA|hAT-Tip100 -78739 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr4-7383 chr4 61315091 61315301 + 7.78 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 113024 NM_001371342 chr6-5709 chr6 136377956 136378166 + 7.78 0.000 intron (NM_001198611, intron 5 of 16) intron (NM_001198611, intron 5 of 16) -88210 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr7-6391 chr7 152234468 152234678 + 7.78 0.000 intron (NM_170606, intron 16 of 58) L1ME1|LINE|L1 159536 NM_001371474 chr21-1645 chr21 24279452 24279662 + 7.78 0.000 Intergenic L1PA11|LINE|L1 41820 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr3-6808 chr3 145678473 145678683 + 7.78 0.000 Intergenic LTR33|LTR|ERVL 390607 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr10-8727 chr10 103290960 103291170 + 7.78 0.000 TTS (NM_032727) TTS (NM_032727) 13927 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr13-3084 chr13 45826878 45827088 + 7.78 0.000 intron (NM_198849, intron 1 of 1) intron (NM_198849, intron 1 of 1) 24770 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr5-5541 chr5 146922219 146922429 + 7.78 0.000 intron (NM_001271900, intron 2 of 10) intron (NM_001271900, intron 2 of 10) -2818 NR_047115 100874361 Hs.193825 NR_047115 ENSG00000249553 PPP2R2B-IT1 - PPP2R2B intronic transcript 1 ncRNA chr10-6454 chr10 30063246 30063456 + 7.78 0.000 intron (NM_001350021, intron 1 of 4) intron (NM_001350021, intron 1 of 4) -3765 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr9-5877 chr9 131379037 131379247 + 7.78 0.000 Intergenic L1MB7|LINE|L1 -50948 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr21-960 chr21 44739696 44739906 + 7.78 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -28229 NM_001272037 54084 Hs.660703 NM_144991 ENSG00000175894 TSPEAR C21orf29|DFNB98|ECTD14|TSP-EAR thrombospondin type laminin G domain and EAR repeats protein-coding chr6-6398 chr6 82080556 82080766 + 7.78 0.000 intron (NR_149135, intron 1 of 3) L1PA16|LINE|L1 21104 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr19-3454 chr19 30375521 30375731 + 7.78 0.000 intron (NM_014717, intron 1 of 4) intron (NM_014717, intron 1 of 4) 3242 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr3-9334 chr3 45885498 45885708 + 7.78 0.000 promoter-TSS (NM_001256369) promoter-TSS (NM_001256369) -901 NM_001256369 10803 Hs.225946 NM_006641 ENSG00000173585 CCR9 CC-CKR-9|CDw199|GPR-9-6|GPR28 C-C motif chemokine receptor 9 protein-coding chr11-9901 chr11 74875783 74875993 + 7.78 0.000 intron (NM_001270381, intron 8 of 15) HUERS-P3-int|LTR|ERV1 73203 NM_001270380 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr10-2594 chr10 74055663 74055873 + 7.78 0.000 intron (NM_014000, intron 2 of 21) intron (NM_014000, intron 2 of 21) 57652 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chrX-1904 chrX 137776290 137776500 + 7.78 0.000 Intergenic L3|LINE|CR1 210268 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr2-9274 chr2 221501538 221501748 + 7.78 0.000 intron (NM_001363748, intron 3 of 17) MIRb|SINE|MIR 70661 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr11-5882 chr11 11846339 11846549 + 7.78 0.000 intron (NM_017944, intron 1 of 26) intron (NM_017944, intron 1 of 26) 5021 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr1-5751 chr1 113188071 113188281 + 7.78 0.000 Intergenic MER70A|LTR|ERVL 18077 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr3-3236 chr3 33231711 33231921 + 7.78 0.000 Intergenic Intergenic -13006 NM_015551 26032 Hs.196647 NM_015551 ENSG00000173705 SUSD5 - sushi domain containing 5 protein-coding chr10-5437 chr10 78188600 78188810 + 7.78 0.000 Intergenic Intergenic -59920 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA chr6-7975 chr6 114064609 114064819 + 7.78 0.000 intron (NR_125845, intron 4 of 9) L2b|LINE|L2 -1837 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chrX-4536 chrX 68239163 68239373 + 7.78 0.000 intron (NM_002547, intron 5 of 24) LTR1A1|LTR|ERV1 194227 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chrX-2119 chrX 27754287 27754497 + 7.78 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -53598 NM_182506 139422 Hs.447363 NM_182506 ENSG00000177689 MAGEB10 - MAGE family member B10 protein-coding chr3-9043 chr3 23446851 23447061 + 7.78 0.000 intron (NM_001370225, intron 3 of 5) ERVL-E-int|LTR|ERVL 243629 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr10-5972 chr10 123798129 123798339 + 7.78 0.000 intron (NM_198148, intron 5 of 13) L2c|LINE|L2 93573 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr10-1489 chr10 338816 339026 + 7.78 0.000 intron (NM_014974, intron 29 of 36) (CCTGCAC)n|Simple_repeat|Simple_repeat 158927 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr16-6868 chr16 84020746 84020956 + 7.78 0.000 intron (NM_001080442, intron 6 of 9) MSTC-int|LTR|ERVL-MaLR 21306 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr12-3510 chr12 125296846 125297056 + 7.78 0.000 intron (NM_001366854, intron 1 of 8) intron (NM_001366854, intron 1 of 8) -29665 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr6-3312 chr6 165702518 165702728 + 7.78 0.000 Intergenic Intergenic -40343 NM_006661 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chrX-2069 chrX 19665533 19665743 + 7.78 0.000 intron (NM_001024666, intron 5 of 16) intron (NM_001024666, intron 5 of 16) 5361 NM_001353897 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr6-8524 chr6 159973496 159973706 + 7.78 0.000 intron (NM_000876, intron 1 of 47) intron (NM_000876, intron 1 of 47) 4502 NM_000876 3482 Hs.487062 NM_000876 ENSG00000197081 IGF2R CD222|CI-M6PR|CIMPR|M6P-R|M6P/IGF2R|MPR 300|MPR1|MPR300|MPRI insulin like growth factor 2 receptor protein-coding chr16-4223 chr16 14049564 14049774 + 7.78 0.000 Intergenic L1MC4|LINE|L1 -21393 NM_001365420 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr1-7652 chr1 9179607 9179817 + 7.78 0.000 intron (NR_132742, intron 1 of 1) intron (NR_132742, intron 1 of 1) -2492 NR_132738 102724571 Hs.599298 NR_132738 ENSG00000234546 LNCTAM34A GUARDIN|LINC01759 long non coding transcriptional activator of miR34a ncRNA chr12-7568 chr12 74669860 74670070 + 7.78 0.000 Intergenic Intergenic 132130 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr6-7055 chr6 27332810 27333020 + 7.78 0.000 Intergenic Intergenic 8154 NR_045612 387316 Hs.326753 NM_032030 VN1R10P FKSG83|VNR6I1P|b24o18.2|hs6V1-1p vomeronasal 1 receptor 10 pseudogene pseudo chr11-10476 chr11 117970594 117970804 + 7.78 0.000 Intergenic L2b|LINE|L2 -15692 NM_001558 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding chr6-8350 chr6 148274062 148274272 + 7.78 0.000 intron (NM_001346505, intron 1 of 19) intron (NM_001346505, intron 1 of 19) 1839 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr10-3433 chr10 42079692 42079902 + 7.78 0.000 Intergenic Intergenic 288248 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr22-3579 chr22 19658266 19658476 + 7.78 0.000 Intergenic Intergenic -56132 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding chr5-6021 chr5 154102741 154102951 + 7.78 0.000 Intergenic Intergenic 63879 NM_005927 4238 Hs.432818 NM_005927 ENSG00000037749 MFAP3 - microfibril associated protein 3 protein-coding chr14-4517 chr14 39016086 39016296 + 7.78 0.000 Intergenic Intergenic -86949 NR_146545 105370458 NR_146545 ENSG00000258651 SEC23A-AS1 - SEC23A antisense RNA 1 ncRNA chr2-14162 chr2 204134504 204134714 + 7.78 0.000 Intergenic Intergenic 197861 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr2-5815 chr2 231673065 231673275 + 7.78 0.000 Intergenic Intergenic -35355 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr4-6155 chr4 34993614 34993824 + 7.78 0.000 Intergenic Intergenic -723972 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr10-4544 chr10 98679149 98679359 + 7.78 0.000 intron (NM_021828, intron 6 of 11) Charlie1|DNA|hAT-Charlie -232291 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr6-2535 chr6 13775324 13775534 + 7.78 0.000 Intergenic AluSx3|SINE|Alu 39131 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr3-5572 chr3 5984698 5984908 + 7.78 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -734548 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr15-4549 chr15 57033278 57033488 + 7.78 0.000 intron (NM_001322164, intron 3 of 19) intron (NM_001322164, intron 3 of 19) 113938 NM_001322164 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr5-6463 chr5 171743460 171743670 + 7.78 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -42307 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr22-3736 chr22 26152238 26152448 + 7.78 0.000 Intergenic Intergenic -17119 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr2-8280 chr2 101956095 101956305 + 7.78 0.000 Intergenic MER115|DNA|hAT-Tip100 -27265 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr12-2067 chr12 121784569 121784779 + 7.78 0.000 intron (NM_019034, intron 2 of 4) MIRc|SINE|MIR 9014 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr20-2672 chr20 45209211 45209421 + 7.78 0.000 intron (NM_003007, intron 2 of 2) intron (NM_003007, intron 2 of 2) 2283 NM_003007 6406 Hs.1968 NM_003007 ENSG00000124233 SEMG1 CT103|SEMG|SGI|dJ172H20.2 semenogelin 1 protein-coding chr18-2784 chr18 2638568 2638778 + 7.78 0.000 Intergenic L1MC1|LINE|L1 16722 NR_033754 645158 Hs.712861 NR_033754 ENSG00000266405 CBX3P2 - chromobox 3 pseudogene 2 pseudo chr18-2124 chr18 53935227 53935437 + 7.78 0.000 Intergenic Intergenic 287080 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr5-5558 chr5 148543843 148544053 + 7.78 0.000 intron (NM_001040172, intron 3 of 5) intron (NM_001040172, intron 3 of 5) 93113 NM_001040169 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr20-2254 chr20 2684885 2685095 + 7.78 0.000 Intergenic Intergenic -7790 NR_138537 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr2-11366 chr2 208957482 208957692 + 7.78 0.000 Intergenic THE1D|LTR|ERVL-MaLR 414945 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chrX-4882 chrX 106584154 106584364 + 7.78 0.000 Intergenic Intergenic -27671 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr2-3888 chr2 42569177 42569387 + 7.78 0.000 intron (NM_001330443, intron 1 of 16) intron (NM_001330443, intron 1 of 16) 650 NM_001330443 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr12-3515 chr12 128303388 128303598 + 7.78 0.000 intron (NM_001136103, intron 1 of 8) MamRep1527|LTR|LTR 9401 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr3-9499 chr3 50862620 50862830 + 7.78 0.000 intron (NM_004947, intron 3 of 52) L1PA17|LINE|L1 187645 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr9-8363 chr9 117422529 117422739 + 7.78 0.000 Intergenic Intergenic -7577 NM_014010 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr5-5400 chr5 135355018 135355228 + 7.78 0.000 intron (NM_138610, intron 5 of 8) intron (NM_138610, intron 5 of 8) 44115 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr13-3240 chr13 30585706 30585916 + 7.78 0.000 intron (NM_001370340, intron 1 of 4) L2|LINE|L2 31776 NM_001370340 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr1-15345 chr1 143217421 143217631 + 7.78 0.000 Intergenic Intergenic 205066 NR_027354 645166 Hs.744183 NR_027354 LSP1P5 - LSP1 pseudogene 5 pseudo chr2-8927 chr2 184183957 184184167 + 7.78 0.000 Intergenic MLT2A2|LTR|ERVL -194913 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr2-11335 chr2 201887983 201888193 + 7.78 0.000 intron (NM_001261435, intron 12 of 13) intron (NM_001261435, intron 12 of 13) 81509 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr2-12982 chr2 105358649 105358859 + 7.78 0.000 3' UTR (NM_001318899, exon 8 of 8) 3' UTR (NM_001318899, exon 8 of 8) 21214 NM_024093 79074 Hs.549577 NM_024093 ENSG00000135974 C2orf49 asw chromosome 2 open reading frame 49 protein-coding chr8-2444 chr8 115450182 115450392 + 7.78 0.000 intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 217726 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr15-1999 chr15 43352908 43353118 + 7.78 0.000 3' UTR (NM_001159280, exon 12 of 12) 3' UTR (NM_001159280, exon 12 of 12) 17047 NM_152455 146050 Hs.418287 NM_152455 ENSG00000140265 ZSCAN29 ZNF690|Zfp690 zinc finger and SCAN domain containing 29 protein-coding chr1-10690 chr1 187903509 187903719 + 7.78 0.000 Intergenic Intergenic 459986 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr10-8748 chr10 103723903 103724113 + 7.78 0.000 intron (NM_014631, intron 5 of 13) MIRc|SINE|MIR -22771 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr5-6971 chr5 144960205 144960415 + 7.78 0.000 Intergenic Intergenic 754919 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr19-5643 chr19 5227273 5227483 + 7.78 0.000 intron (NM_130854, intron 12 of 32) intron (NM_130854, intron 12 of 32) 113434 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr4-4306 chr4 28468716 28468926 + 7.78 0.000 Intergenic Intergenic -350761 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr6-3736 chr6 6710414 6710624 + 7.78 0.000 Intergenic Intergenic -87693 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr6-3449 chr6 150418989 150419199 + 7.78 0.000 Intergenic Intergenic 50082 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr10-5433 chr10 77955740 77955950 + 7.78 0.000 Intergenic AluSz6|SINE|Alu 29033 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr10-2243 chr10 92848550 92848760 + 7.78 0.000 intron (NM_001319195, intron 1 of 21) CpG 135 NM_019053 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr15-3298 chr15 78044546 78044756 + 7.78 0.000 intron (NM_144572, intron 3 of 12) MIRb|SINE|MIR 33001 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr15-2721 chr15 93833406 93833616 + 7.78 0.000 Intergenic L1MEd|LINE|L1 -23049 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr20-3357 chr20 32602735 32602945 + 7.78 0.000 intron (NR_034152, intron 2 of 2) L2a|LINE|L2 15361 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr9-5462 chr9 98679678 98679888 + 7.78 0.000 intron (NM_005458, intron 1 of 18) MER39|LTR|ERV1 29152 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr19-6783 chr19 41115298 41115508 + 7.78 0.000 intron (NR_135528, intron 1 of 9) (CT)n|Simple_repeat|Simple_repeat 971 NR_135528 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr12-2429 chr12 50505022 50505232 + 7.78 0.000 5' UTR (NM_173602, exon 1 of 38) 5' UTR (NM_173602, exon 1 of 38) 142 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr12-7272 chr12 52470852 52471062 + 7.78 0.000 intron (NM_173086, intron 5 of 8) intron (NM_173086, intron 5 of 8) 2848 NM_173086 286887 Hs.709234 NM_173086 ENSG00000170465 KRT6C K6E|KRT6E|PPKNEFD keratin 6C protein-coding chr15-3806 chr15 72939689 72939899 + 7.78 0.000 Intergenic Intergenic -112669 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr5-7845 chr5 71744123 71744333 + 7.78 0.000 Intergenic MER50|LTR|ERV1 24953 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr18-2347 chr18 29164223 29164433 + 7.78 0.000 Intergenic Intergenic -987198 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr16-3105 chr16 68163366 68163576 + 7.78 0.000 intron (NM_004555, intron 4 of 10) SVA_D|Retroposon|SVA 70028 NR_106831 102466194 NR_106831 ENSG00000284259 MIR6773 hsa-mir-6773 microRNA 6773 ncRNA chr8-7187 chr8 124568809 124569019 + 7.78 0.000 intron (NM_001363294, intron 6 of 13) intron (NM_001363294, intron 6 of 13) 29791 NM_005005 4715 Hs.15977 NM_005005 ENSG00000147684 NDUFB9 B22|CI-B22|LYRM3|MC1DN24|UQOR22 NADH:ubiquinone oxidoreductase subunit B9 protein-coding chr17-6521 chr17 31654020 31654230 + 7.78 0.000 Intergenic Intergenic 78714 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr2-9182 chr2 215164147 215164357 + 7.78 0.000 Intergenic SVA_B|Retroposon|SVA -25626 NR_103740 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr22-4171 chr22 45404099 45404309 + 7.78 0.000 intron (NM_148674, intron 4 of 24) AluSz|SINE|Alu 9395 NM_148674 27127 Hs.334176 NM_148674 ENSG00000077935 SMC1B SMC1BETA|SMC1L2 structural maintenance of chromosomes 1B protein-coding chr1-15448 chr1 154037330 154037540 + 7.78 0.000 intron (NM_001159484, intron 27 of 37) L1MA3|LINE|L1 46673 NM_001030 6232 Hs.546291 NM_001030 ENSG00000177954 RPS27 DBA17|MPS-1|MPS1|S27 ribosomal protein S27 protein-coding chr9-8432 chr9 121636490 121636700 + 7.78 0.000 intron (NM_032552, intron 1 of 16) intron (NM_032552, intron 1 of 16) 69493 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr14-2447 chr14 75960591 75960801 + 7.78 0.000 intron (NM_001329939, intron 7 of 7) AmnSINE1|SINE|5S-Deu-L2 21299 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr9-6196 chr9 93865176 93865386 + 7.78 0.000 Intergenic Intergenic 45924 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA chr9-4882 chr9 4661213 4661423 + 7.78 0.000 promoter-TSS (NM_203453) promoter-TSS (NM_203453) 905 NR_148447 55064 Hs.179615 NM_017985 ENSG00000106686 SPATA6L C9orf68|bA6J24.2 spermatogenesis associated 6 like protein-coding chr4-7683 chr4 87617702 87617912 + 7.78 0.000 TTS (NM_014208) TTS (NM_014208) 9278 NM_014208 1834 Hs.678914 NM_014208 ENSG00000152591 DSPP DFNA39|DGI1|DMP3|DPP|DSP dentin sialophosphoprotein protein-coding chr6-3523 chr6 36760586 36760796 + 7.78 0.000 intron (NM_020939, intron 12 of 20) L2a|LINE|L2 -3282 NM_001314018 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr19-3549 chr19 45377098 45377308 + 7.78 0.000 Intergenic AluSg7|SINE|Alu -6616 NM_001130867 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2, TFIIH core complex helicase subunit protein-coding chr9-1423 chr9 129315657 129315867 + 7.78 0.000 Intergenic Intergenic -5254 NR_149714 414318 Hs.449434 NR_149714 C9orf106 - chromosome 9 open reading frame 106 (putative) ncRNA chr21-1112 chr21 35528741 35528951 + 7.78 0.000 intron (NR_073512, intron 1 of 2) intron (NR_073512, intron 1 of 2) 51918 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr5-4723 chr5 42825893 42826103 + 7.78 0.000 Intergenic LTR1F|LTR|ERV1 -13922 NM_001093726 6414 Hs.275775 NM_005410 ENSG00000250722 SELENOP SELP|SEPP|SEPP1|SeP selenoprotein P protein-coding chr19-5899 chr19 47539988 47540198 + 7.78 0.000 intron (NM_001277075, intron 7 of 16) intron (NM_001277075, intron 7 of 16) -25030 NM_003827 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chr9-5250 chr9 78619738 78619948 + 7.78 0.000 Intergenic Intergenic 322718 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr17-3343 chr17 76935382 76935592 + 7.78 0.000 intron (NM_144677, intron 11 of 16) L1MEg|LINE|L1 33712 NR_136416 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr15-2322 chr15 81133990 81134200 + 7.78 0.000 promoter-TSS (NM_001353365) promoter-TSS (NM_001353365) -175 NM_173528 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr14-2630 chr14 64598570 64598780 + 7.78 0.000 Intergenic Intergenic 48714 NM_172365 145376 Hs.144696 NM_172365 ENSG00000165807 PPP1R36 C14orf50 protein phosphatase 1 regulatory subunit 36 protein-coding chr14-3970 chr14 29637457 29637667 + 7.78 0.000 intron (NM_001330069, intron 7 of 18) intron (NM_001330069, intron 7 of 18) 289534 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr17-3256 chr17 30812718 30812928 + 7.78 0.000 intron (NM_015986, intron 1 of 7) intron (NM_015986, intron 1 of 7) 11869 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr6-3951 chr6 90131752 90131962 + 7.78 0.000 intron (NM_021813, intron 4 of 8) intron (NM_021813, intron 4 of 8) 164986 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr9-7884 chr9 87869882 87870092 + 7.78 0.000 intron (NR_149022, intron 3 of 3) (CA)n|Simple_repeat|Simple_repeat -10931 NR_040117 392364 Hs.689633 NR_040117 LOC392364 - nuclear pore associated protein 1 pseudogene pseudo chr4-3081 chr4 149145894 149146104 + 7.78 0.000 Intergenic Intergenic -8296 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr14-3465 chr14 101227649 101227859 + 7.78 0.000 Intergenic Intergenic 106898 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr3-10098 chr3 110941336 110941546 + 7.78 0.000 Intergenic Intergenic 128518 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr14-5130 chr14 90123752 90123962 + 7.78 0.000 intron (NM_022054, intron 1 of 1) intron (NM_022054, intron 1 of 1) 61863 NM_022054 56659 Hs.510191 NM_022054 ENSG00000152315 KCNK13 K2p13.1|THIK-1|THIK1 potassium two pore domain channel subfamily K member 13 protein-coding chr5-5004 chr5 82335011 82335221 + 7.78 0.000 Intergenic Intergenic 55654 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr1-4206 chr1 100687380 100687590 + 7.78 0.000 Intergenic L1PB1|LINE|L1 -32155 NM_001199834 7412 Hs.109225 NM_001078 ENSG00000162692 VCAM1 CD106|INCAM-100 vascular cell adhesion molecule 1 protein-coding chr1-8786 chr1 1452991 1453201 + 7.78 0.000 intron (NM_001039211, intron 3 of 11) intron (NM_001039211, intron 3 of 11) 3407 NM_001039211 219293 Hs.724767 NM_001039211 ENSG00000215915 ATAD3C - ATPase family AAA domain containing 3C protein-coding chr15-4166 chr15 92467727 92467937 + 7.78 0.000 3' UTR (NM_006011, exon 6 of 6) 3' UTR (NM_006011, exon 6 of 6) 3714 NR_126501 104613533 Hs.97584 NR_126501 ENSG00000259170 LOC104613533 - uncharacterized LOC104613533 ncRNA chr19-5938 chr19 52591543 52591753 + 7.78 0.000 Intergenic AluSx|SINE|Alu -5036 NR_023311 7696 Hs.373648 NM_003438 ZNF137P ZNF137|pHZ-30 zinc finger protein 137, pseudogene pseudo chr14-4625 chr14 53442996 53443206 + 7.78 0.000 Intergenic Intergenic 289747 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr15-3202 chr15 72249433 72249643 + 7.78 0.000 intron (NM_001323524, intron 19 of 23) intron (NM_001323524, intron 19 of 23) -17914 NM_182470 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr5-6373 chr5 139379724 139379934 + 7.78 0.000 exon (NM_152685, exon 8 of 15) exon (NM_152685, exon 8 of 15) 3468 NM_005847 9963 Hs.643467 NM_005847 ENSG00000170482 SLC23A1 SLC23A2|SVCT1|YSPL3 solute carrier family 23 member 1 protein-coding chrX-2108 chrX 25600878 25601088 + 7.78 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -537360 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr6-8311 chr6 144605358 144605568 + 7.78 0.000 intron (NM_007124, intron 50 of 73) intron (NM_007124, intron 50 of 73) 199808 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr1-8830 chr1 2865746 2865956 + 7.78 0.000 Intergenic Intergenic -64983 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr11-2842 chr11 2150240 2150450 + 7.78 0.000 promoter-TSS (NM_001007139) promoter-TSS (NM_001007139) -742 NM_001007139 3481 Hs.272259 NM_000612 ENSG00000167244 IGF2 C11orf43|GRDF|IGF-II|PP9974 insulin like growth factor 2 protein-coding chr16-3754 chr16 23183145 23183355 + 7.78 0.000 intron (NM_001039, intron 1 of 12) CpG 505 NM_001039 6340 Hs.371727 NM_001039 ENSG00000166828 SCNN1G BESC3|ENaCg|ENaCgamma|LDLS2|PHA1|SCNEG sodium channel epithelial 1 gamma subunit protein-coding chr17-5748 chr17 59332998 59333208 + 7.78 0.000 intron (NM_001005404, intron 1 of 4) intron (NM_001005404, intron 1 of 4) 1448 NM_001005404 388403 Hs.463613 NM_001005404 ENSG00000175155 YPEL2 FKSG4 yippee like 2 protein-coding chr1-8249 chr1 32291127 32291337 + 7.78 0.000 promoter-TSS (NM_004964) promoter-TSS (NM_004964) -851 NM_004964 3065 Hs.88556 NM_004964 ENSG00000116478 HDAC1 GON-10|HD1|KDAC1|RPD3|RPD3L1 histone deacetylase 1 protein-coding chr5-8821 chr5 150272501 150272711 + 7.78 0.000 intron (NM_001369025, intron 2 of 17) L2b|LINE|L2 17167 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chr15-3970 chr15 45123421 45123631 + 7.78 0.000 promoter-TSS (NM_001276266) promoter-TSS (NM_001276266) -483 NM_001276265 90527 Hs.356664 NM_144565 ENSG00000140254 DUOXA1 NIP|NUMBIP|mol dual oxidase maturation factor 1 protein-coding chr2-10921 chr2 73315831 73316041 + 7.78 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -22388 NM_001965 1961 Hs.3052 NM_001965 ENSG00000135625 EGR4 AT133|NGFI-C|NGFIC|PAT133 early growth response 4 protein-coding chr20-2939 chr20 9273390 9273600 + 7.78 0.000 intron (NM_182797, intron 1 of 35) L2b|LINE|L2 -34305 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr13-3745 chr13 41983550 41983760 + 7.78 0.000 Intergenic Intergenic 22486 NR_039974 100507240 Hs.147766 NR_039974 ENSG00000278338 VWA8-AS1 - VWA8 antisense RNA 1 (head to head) ncRNA chr3-10219 chr3 121820299 121820509 + 7.78 0.000 intron (NM_001023571, intron 5 of 11) intron (NM_001023571, intron 5 of 11) 14656 NM_001023570 9657 Hs.604110 NM_001023570 ENSG00000173226 IQCB1 NPHP5|PIQ|SLSN5 IQ motif containing B1 protein-coding chr1-15594 chr1 160709596 160709806 + 7.78 0.000 intron (NM_001778, intron 1 of 3) Charlie16a|DNA|hAT-Charlie 2121 NM_001778 962 Hs.243564 NM_001778 ENSG00000117091 CD48 BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48 CD48 molecule protein-coding chr14-1097 chr14 68762915 68763125 + 7.78 0.000 Intergenic Intergenic 30894 NM_004926 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr6-5507 chr6 165034388 165034598 + 7.78 0.000 Intergenic HAL1|LINE|L1 -212430 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr1-14169 chr1 32757099 32757309 + 7.78 0.000 intron (NM_001369553, intron 1 of 6) intron (NM_001369553, intron 1 of 6) 3205 NM_001369553 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr3-6215 chr3 64445381 64445591 + 7.78 0.000 Intergenic CpG -115860 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr2-9797 chr2 121885532 121885742 + 7.78 0.000 Intergenic Intergenic 129986 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr14-3283 chr14 83227510 83227720 + 7.78 0.000 Intergenic Intergenic 584983 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chrX-2266 chrX 48345098 48345308 + 7.78 0.000 Intergenic MIRc|SINE|MIR 11500 NM_021014 10214 Hs.558445 NM_021014 ENSG00000165584 SSX3 CT5.3 SSX family member 3 protein-coding chr15-4541 chr15 56306995 56307205 + 7.78 0.000 Intergenic Intergenic -58324 NM_198524 374618 Hs.511476 NM_198524 ENSG00000151575 TEX9 - testis expressed 9 protein-coding chr10-8669 chr10 100686374 100686584 + 7.78 0.000 Intergenic Intergenic -48917 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr5-3741 chr5 37975704 37975914 + 7.78 0.000 Intergenic Intergenic 27318 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA chr2-4835 chr2 69306539 69306749 + 7.78 0.000 Intergenic CpG 80583 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr1-12612 chr1 37005009 37005219 + 7.78 0.000 intron (NM_000831, intron 1 of 15) intron (NM_000831, intron 1 of 15) 29401 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chrX-5366 chrX 150213410 150213620 + 7.78 0.000 Intergenic Intergenic -14489 NR_031748 100313839 NR_031748 ENSG00000252454 MIR2114 - microRNA 2114 ncRNA chr4-3371 chr4 9897065 9897275 + 7.78 0.000 intron (NM_001001290, intron 9 of 12) MIR|SINE|MIR 115536 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr8-3742 chr8 22450280 22450490 + 7.78 0.000 intron (NM_005605, intron 1 of 13) L2b|LINE|L2 9415 NM_001243975 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr1-4418 chr1 209937587 209937797 + 7.78 0.000 promoter-TSS (NR_027459) promoter-TSS (NR_027459) -482 NR_027459 255928 Hs.658866 NM_153262 ENSG00000143469 SYT14 SCAR11|sytXIV synaptotagmin 14 protein-coding chr2-10796 chr2 45763354 45763564 + 7.78 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 111784 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr14-4001 chr14 37122332 37122542 + 7.78 0.000 intron (NM_001171170, intron 1 of 10) L2b|LINE|L2 -49589 NR_033240 100129794 Hs.601579 NR_033240 ENSG00000258708 SLC25A21-AS1 - SLC25A21 antisense RNA 1 ncRNA chr12-3701 chr12 3432346 3432556 + 7.78 0.000 intron (NM_001256536, intron 1 of 9) intron (NM_001256536, intron 1 of 9) 51102 NM_001256536 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr6-6408 chr6 84449568 84449778 + 7.78 0.000 intron (NR_132100, intron 3 of 4) intron (NR_132100, intron 3 of 4) 25256 NR_132100 105377880 Hs.171384 NR_132100 ENSG00000231776 LINC01611 TCONS_l2_00025430 long intergenic non-protein coding RNA 1611 ncRNA chr11-6481 chr11 67903338 67903548 + 7.78 0.000 Intergenic AluY|SINE|Alu -98107 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr5-8751 chr5 146887848 146888058 + 7.78 0.000 intron (NM_001271900, intron 2 of 10) intron (NM_001271900, intron 2 of 10) -9026 NR_073527 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr10-8017 chr10 62375196 62375406 + 7.78 0.000 promoter-TSS (NR_104162) promoter-TSS (NR_104162) -174 NR_104162 283045 NR_104162 LOC283045 - uncharacterized LOC283045 ncRNA chr13-2059 chr13 51825229 51825439 + 7.78 0.000 intron (NM_001351003, intron 3 of 4) intron (NM_001351003, intron 3 of 4) 19843 NM_001351003 283521 Hs.649896 NM_178515 ENSG00000281106 TMEM272 LINC00282|NCRNA00282 transmembrane protein 272 protein-coding chr17-3964 chr17 63941239 63941449 + 7.78 0.000 exon (NM_000334, exon 24 of 24) exon (NM_000334, exon 24 of 24) -9013 NM_000626 974 Hs.89575 NM_000626 ENSG00000007312 CD79B AGM6|B29|IGB CD79b molecule protein-coding chr11-9552 chr11 64584359 64584569 + 7.78 0.000 Intergenic L2a|LINE|L2 -6346 NM_001276327 116085 Hs.174424 NM_144585 ENSG00000197891 SLC22A12 OAT4L|RST|URAT1 solute carrier family 22 member 12 protein-coding chr13-3168 chr13 105466421 105466631 + 7.78 0.000 intron (NR_040247, intron 4 of 6) MLT1G|LTR|ERVL-MaLR 310 NM_001161812 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr1-6599 chr1 38354843 38355053 + 7.78 0.000 Intergenic Intergenic -120248 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr14-4384 chr14 28293910 28294120 + 7.78 0.000 Intergenic L1PREC2|LINE|L1 471304 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr3-9337 chr3 46141522 46141732 + 7.78 0.000 Intergenic Intergenic 66686 NM_001295 1230 Hs.301921 NM_001295 ENSG00000163823 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 C-C motif chemokine receptor 1 protein-coding chr5-5601 chr5 151311550 151311760 + 7.78 0.000 Intergenic L1M1|LINE|L1 -7889 NM_181774 285641 Hs.720893 NM_181774 ENSG00000186334 SLC36A3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 member 3 protein-coding chr11-7260 chr11 16632392 16632602 + 7.78 0.000 intron (NM_001367872, intron 2 of 16) L1PA16|LINE|L1 105980 NM_001367872 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr18-872 chr18 39622382 39622592 + 7.78 0.000 promoter-TSS (NR_030628) promoter-TSS (NR_030628) -312 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr10-4798 chr10 7734072 7734282 + 7.78 0.000 intron (NM_002216, intron 14 of 20) L1MC1|LINE|L1 30861 NM_002216 3698 Hs.75285 NM_002216 ENSG00000151655 ITIH2 H2P|SHAP inter-alpha-trypsin inhibitor heavy chain 2 protein-coding chr12-4129 chr12 68144529 68144739 + 7.78 0.000 Intergenic Intergenic 15106 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr6-5911 chr6 52697289 52697499 + 7.78 0.000 Intergenic Intergenic 26281 NM_014051 28978 Hs.94896 NM_014051 ENSG00000096092 TMEM14A C6orf73|PTD011 transmembrane protein 14A protein-coding chr3-8771 chr3 3839226 3839436 + 7.78 0.000 intron (NM_001324188, intron 2 of 2) L1MB2|LINE|L1 -38456 NR_149025 100130207 Hs.587205 NR_149025 ENSG00000144455 LOC100130207 - uncharacterized LOC100130207 ncRNA chr16-4531 chr16 63558698 63558908 + 7.78 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -1522365 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chrX-3367 chrX 145613991 145614201 + 7.78 0.000 Intergenic Intergenic -203733 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr1-7892 chr1 145009488 145009698 + 7.78 0.000 intron (NM_001366280, intron 1 of 8) AluYa5|SINE|Alu 83850 NM_001330684 647135 Hs.497575 NM_001271870 ENSG00000196369 SRGAP2B SRGAP2L|SRGAP2P2 SLIT-ROBO Rho GTPase activating protein 2B protein-coding chr17-3056 chr17 80850813 80851023 + 7.78 0.000 intron (NM_020761, intron 11 of 33) intron (NM_020761, intron 11 of 33) -45286 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr11-7815 chr11 107141907 107142117 + 7.78 0.000 Intergenic Intergenic -123536 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr2-8208 chr2 95269336 95269546 + 7.78 0.000 Intergenic Intergenic -5008 NM_001165977 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding chr11-6111 chr11 36801024 36801234 + 7.78 0.000 Intergenic Intergenic -202850 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr6-6592 chr6 142292108 142292318 + 7.78 0.000 Intergenic HAL1|LINE|L1 -9706 NM_001032394 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr4-6533 chr4 170710888 170711098 + 7.78 0.000 Intergenic Intergenic 32742 NR_134683 100506107 Hs.380602 NR_134683 ENSG00000250968 LINC02382 - long intergenic non-protein coding RNA 2382 ncRNA chr1-7106 chr1 200908373 200908583 + 7.78 0.000 intron (NM_001367290, intron 6 of 9) intron (NM_001367290, intron 6 of 9) 13578 NM_001367290 55765 Hs.518997 NM_018265 ENSG00000163362 INAVA C1orf106 innate immunity activator protein-coding chr20-2742 chr20 50427190 50427400 + 7.78 0.000 Intergenic HAL1|LINE|L1 -83026 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr16-6774 chr16 77208103 77208313 + 7.78 0.000 intron (NM_001129979, intron 2 of 10) intron (NM_001129979, intron 2 of 10) 8800 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding chr19-2926 chr19 3054482 3054692 + 7.78 0.000 intron (NM_198969, intron 5 of 6) MER91C|DNA|hAT-Tip100 -6952 NM_001144761 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr20-2631 chr20 42458268 42458478 + 7.78 0.000 intron (NM_133170, intron 8 of 31) MIR|SINE|MIR -227110 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr5-4958 chr5 77659811 77660021 + 7.78 0.000 Intergenic L1M1|LINE|L1 -21219 NM_032109 23440 Hs.202247 NM_032109 ENSG00000171540 OTP - orthopedia homeobox protein-coding chr2-9431 chr2 232808278 232808488 + 7.78 0.000 intron (NM_015575, intron 17 of 30) intron (NM_015575, intron 17 of 30) -31818 NM_001172416 3769 Hs.467338 NM_002242 ENSG00000115474 KCNJ13 KIR1.4|KIR7.1|LCA16|SVD potassium voltage-gated channel subfamily J member 13 protein-coding chr16-3854 chr16 68015871 68016081 + 7.78 0.000 promoter-TSS (NM_001282442) promoter-TSS (NM_001282442) -65 NM_001282442 100131303 Hs.655900 NM_001282442 ENSG00000263201 DPEP2NB - DPEP2 neighbor protein-coding chr12-4099 chr12 56985934 56986144 + 7.78 0.000 Intergenic Intergenic -8453 NM_007264 11318 Hs.483909 NM_007264 ENSG00000166856 GPR182 7TMR|ADMR|AM-R|AMR|G10D|L1-R|gamrh|hrhAMR G protein-coupled receptor 182 protein-coding chr22-2095 chr22 22746213 22746423 + 7.78 0.000 Intergenic Intergenic -76458 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr17-6968 chr17 47724745 47724955 + 7.78 0.000 Intergenic Intergenic -8386 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr6-4355 chr6 19267402 19267612 + 7.78 0.000 Intergenic Intergenic -87027 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr13-3075 chr13 43113548 43113758 + 7.78 0.000 3' UTR (NM_013238, exon 6 of 6) 3' UTR (NM_013238, exon 6 of 6) 488 NR_047013 100874159 Hs.633241 NR_047013 LINC00400 - long intergenic non-protein coding RNA 400 ncRNA chr1-15535 chr1 157313210 157313420 + 7.78 0.000 Intergenic L1M3a|LINE|L1 -174724 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr3-9778 chr3 71202136 71202346 + 7.78 0.000 intron (NR_146142, intron 5 of 19) MER130|DNA|DNA 42836 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr11-5540 chr11 94792803 94793013 + 7.78 0.000 intron (NM_001301007, intron 1 of 11) intron (NM_001301007, intron 1 of 11) 24552 NM_001301007 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr3-3766 chr3 10758620 10758830 + 7.78 0.000 TTS (NR_027102) TTS (NR_027102) 5484 NR_152730 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA chr2-13991 chr2 190429245 190429455 + 7.78 0.000 intron (NM_017694, intron 2 of 7) AluSx1|SINE|Alu 20995 NM_017694 54842 Hs.418581 NM_017694 ENSG00000151690 MFSD6 MMR2|hMMR2 major facilitator superfamily domain containing 6 protein-coding chr1-13836 chr1 19782692 19782902 + 7.78 0.000 intron (NM_001349112, intron 2 of 14) MIR|SINE|MIR 16552 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr18-2103 chr18 50819902 50820112 + 7.78 0.000 promoter-TSS (NM_001127175) promoter-TSS (NM_001127175) 9 NM_031939 83876 Hs.30495 NM_031939 ENSG00000134042 MRO B29|C18orf3 maestro protein-coding chr12-7215 chr12 50343018 50343228 + 7.78 0.000 intron (NM_001145475, intron 4 of 7) AluJb|SINE|Alu 53486 NM_001145475 121006 Hs.133187 NM_001145475 ENSG00000185958 FAM186A - family with sequence similarity 186 member A protein-coding chr2-9111 chr2 206580458 206580668 + 7.78 0.000 intron (NM_003812, intron 18 of 25) L1PB1|LINE|L1 -63664 NM_001102659 200726 NM_001102659 ENSG00000235118 FAM237A - family with sequence similarity 237 member A protein-coding chr4-7360 chr4 58566160 58566370 + 7.78 0.000 Intergenic MIR|SINE|MIR -29937 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr15-4014 chr15 58510641 58510851 + 7.78 0.000 intron (NM_000236, intron 1 of 8) Kanga1c|DNA|TcMar-Tc2 -12011 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr2-6781 chr2 46363604 46363814 + 7.78 0.000 intron (NM_001430, intron 6 of 15) intron (NM_001430, intron 6 of 15) 30458 NR_146999 105374582 Hs.570163 NR_146999 ENSG00000228100 LINC01820 - long intergenic non-protein coding RNA 1820 ncRNA chr10-4131 chr10 76001823 76002033 + 7.78 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 219167 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr11-3185 chr11 64378550 64378760 + 7.78 0.000 Intergenic Intergenic 10053 NR_031602 100302280 NR_031602 ENSG00000221273 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA chr1-5812 chr1 206840079 206840289 + 7.78 0.000 intron (NM_013371, intron 5 of 6) intron (NM_013371, intron 5 of 6) 5835 NM_001369605 29949 Hs.661017 NM_013371 ENSG00000142224 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding chr12-1901 chr12 69759641 69759851 + 7.78 0.000 intron (NR_103519, intron 3 of 8) SVA_C|Retroposon|SVA -19206 NM_001278402 117177 Hs.258209 NM_022456 ENSG00000127328 RAB3IP RABIN3|RABIN8 RAB3A interacting protein protein-coding chr6-2501 chr6 127566881 127567091 + 7.78 0.000 Intergenic L1MEg|LINE|L1 -10188 NM_001010905 352999 Hs.226268 NM_001010905 ENSG00000184530 C6orf58 LEG1 chromosome 6 open reading frame 58 protein-coding chrX-1530 chrX 29331121 29331331 + 7.78 0.000 intron (NM_014271, intron 3 of 10) MER94|DNA|hAT-Blackjack -243052 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr9-3148 chr9 105138508 105138718 + 7.78 0.000 Intergenic Intergenic -105992 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr6-2632 chr6 155418456 155418666 + 7.78 0.000 intron (NM_015718, intron 10 of 13) intron (NM_015718, intron 10 of 13) 37278 NM_015718 50508 Hs.247776 NM_015718 ENSG00000074771 NOX3 GP91-3|MOX-2 NADPH oxidase 3 protein-coding chr6-5511 chr6 165763048 165763258 + 7.78 0.000 Intergenic Intergenic -100873 NM_006661 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr18-3088 chr18 34077659 34077869 + 7.78 0.000 intron (NM_001353233, intron 5 of 11) intron (NM_001353233, intron 5 of 11) -29152 NM_001198549 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr10-8567 chr10 95278126 95278336 + 7.78 0.000 intron (NM_020992, intron 1 of 6) MIR|SINE|MIR 12772 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr7-7364 chr7 57128180 57128390 + 7.78 0.000 intron (NM_001370129, intron 1 of 3) intron (NM_001370129, intron 1 of 3) 4151 NM_001370129 90827 Hs.616660 NM_033273 ENSG00000185177 ZNF479 HKr19|KR19 zinc finger protein 479 protein-coding chr8-5231 chr8 122896145 122896355 + 7.78 0.000 intron (NM_001362797, intron 3 of 4) intron (NM_001362797, intron 3 of 4) 114595 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr1-15883 chr1 183101812 183102022 + 7.78 0.000 intron (NM_002293, intron 1 of 27) LTR79|LTR|ERVL 39353 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr1-15261 chr1 113928202 113928412 + 7.78 0.000 non-coding (NR_110725, exon 2 of 5) non-coding (NR_110725, exon 2 of 5) 951 NR_110725 101928846 Hs.232534 NR_110725 ENSG00000235527 HIPK1-AS1 - HIPK1 antisense RNA 1 ncRNA chr3-6324 chr3 79005134 79005344 + 7.78 0.000 intron (NM_002941, intron 3 of 30) intron (NM_002941, intron 3 of 30) 14220 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr10-5062 chr10 43210948 43211158 + 7.78 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) 18686 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr5-7978 chr5 83600243 83600453 + 7.78 0.000 Intergenic AluSx1|SINE|Alu -38034 NR_136215 105379054 Hs.643801 NR_136215 ENSG00000249835 VCAN-AS1 - VCAN antisense RNA 1 ncRNA chr10-3980 chr10 123027072 123027282 + 7.78 0.000 intron (NM_001609, intron 1 of 10) intron (NM_001609, intron 1 of 10) 18171 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chr5-4682 chr5 38321169 38321379 + 7.78 0.000 intron (NM_152403, intron 1 of 21) MER1A|DNA|hAT-Charlie -30288 NR_046219 100852408 Hs.570954 NR_046219 ENSG00000248730 EGFLAM-AS4 - EGFLAM antisense RNA 4 ncRNA chr3-5598 chr3 8686707 8686917 + 7.78 0.000 Intergenic SATR2|Satellite|Satellite -34728 NM_001256749 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr22-3559 chr22 17753375 17753585 + 7.78 0.000 intron (NM_001244567, intron 1 of 5) intron (NM_001244567, intron 1 of 5) 10779 NR_036168 100423025 NR_036168 ENSG00000264757 MIR3198-1 MIR3198|mir-3198-1 microRNA 3198-1 ncRNA chr4-4334 chr4 34332263 34332473 + 7.78 0.000 Intergenic MLT2B3|LTR|ERVL -62621 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr19-4203 chr19 45959680 45959890 + 7.78 0.000 intron (NM_002516, intron 2 of 3) GA-rich|Low_complexity|Low_complexity 14080 NM_002516 4858 Hs.375439 NM_002516 ENSG00000104967 NOVA2 ANOVA|NOVA3 NOVA alternative splicing regulator 2 protein-coding chr3-7422 chr3 115484615 115484825 + 7.78 0.000 Intergenic Intergenic -138790 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr2-6950 chr2 118059881 118060091 + 7.78 0.000 Intergenic Intergenic -28432 NM_001321330 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding chr4-6540 chr4 173403092 173403302 + 7.78 0.000 intron (NM_001329597, intron 2 of 3) intron (NM_001329597, intron 2 of 3) -4081 NM_007281 11341 Hs.7122 NM_007281 ENSG00000164106 SCRG1 SCRG-1 stimulator of chondrogenesis 1 protein-coding chr8-5875 chr8 14973965 14974175 + 7.78 0.000 intron (NM_139167, intron 1 of 7) intron (NM_139167, intron 1 of 7) -120560 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr1-6159 chr1 181797287 181797497 + 7.78 0.000 intron (NM_001205293, intron 47 of 47) intron (NM_001205293, intron 47 of 47) 264320 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr5-5552 chr5 148165795 148166005 + 7.78 0.000 Intergenic Intergenic -2646 NM_001001325 408187 Hs.553815 NM_001001325 ENSG00000196800 SPINK14 SPINK5L2 serine peptidase inhibitor, Kazal type 14 (putative) protein-coding chr10-8545 chr10 93423977 93424187 + 7.78 0.000 intron (NM_013451, intron 5 of 53) MLT1C|LTR|ERVL-MaLR 58252 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr12-2557 chr12 109271271 109271481 + 7.78 0.000 Intergenic Intergenic 37908 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr16-3517 chr16 24395080 24395290 + 7.78 0.000 Intergenic Intergenic 139632 NM_006539 10368 Hs.7235 NM_006539 ENSG00000006116 CACNG3 - calcium voltage-gated channel auxiliary subunit gamma 3 protein-coding chrX-5314 chrX 144516071 144516281 + 7.78 0.000 Intergenic Intergenic 632105 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr22-4256 chr22 48296684 48296894 + 7.78 0.000 Intergenic L1MCa|LINE|L1 22425 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr14-3588 chr14 32244507 32244717 + 7.78 0.000 Intergenic MER50-int|LTR|ERV1 -41343 NR_004394 26827 NR_004394 ENSG00000206625 RNU6-1 RNU6|RNU6A|U6|U6-1 RNA, U6 small nuclear 1 snRNA chr2-8683 chr2 150596281 150596491 + 7.78 0.000 Intergenic Intergenic -24165 NR_110241 101929260 Hs.732324 NR_110241 ENSG00000236049 LINC01920 - long intergenic non-protein coding RNA 1920 ncRNA chr2-12734 chr2 82789187 82789397 + 7.78 0.000 Intergenic Intergenic -67511 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr15-3265 chr15 76261522 76261732 + 7.78 0.000 intron (NM_000126, intron 9 of 11) (AGC)n|Simple_repeat|Simple_repeat -1475 NR_028510 7302 Hs.684881 NR_002721 TYRO3P - TYRO3P protein tyrosine kinase pseudogene pseudo chr18-832 chr18 10562617 10562827 + 7.78 0.000 Intergenic MER103C|DNA|hAT-Charlie 36695 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr1-8078 chr1 2426909 2427119 + 7.78 0.000 Intergenic (TGGCAGAG)n|Simple_repeat|Simple_repeat -14443 NM_153818 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr1-10756 chr1 200269311 200269521 + 7.78 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 104376 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr10-8916 chr10 115387347 115387557 + 7.78 0.000 intron (NM_207303, intron 19 of 28) intron (NM_207303, intron 19 of 28) 294087 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr1-6775 chr1 79097701 79097911 + 7.78 0.000 Intergenic Intergenic -91076 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr3-6719 chr3 135239480 135239690 + 7.78 0.000 intron (NM_004441, intron 12 of 15) intron (NM_004441, intron 12 of 15) 444325 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr2-3668 chr2 176088302 176088512 + 7.78 0.000 Intergenic CpG -4314 NM_000523 3239 Hs.152414 NM_000523 ENSG00000128714 HOXD13 BDE|BDSD|HOX4I|SPD|SPD1 homeobox D13 protein-coding chr6-3168 chr6 119881472 119881682 + 7.78 0.000 Intergenic Intergenic -133602 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr13-1987 chr13 25253755 25253965 + 7.78 0.000 exon (NM_004685, exon 11 of 14) exon (NM_004685, exon 11 of 14) 33628 NM_004685 9107 Hs.643702 NM_004685 ENSG00000139505 MTMR6 - myotubularin related protein 6 protein-coding chr2-2811 chr2 47858893 47859103 + 7.78 0.000 intron (NM_001190274, intron 1 of 22) AluSg|SINE|Alu 29721 NM_025133 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr17-4596 chr17 3493875 3494085 + 7.78 0.000 intron (NM_001128085, intron 5 of 6) (TTG)n|Simple_repeat|Simple_repeat 17983 NM_000049 443 Hs.171142 NM_000049 ENSG00000108381 ASPA ACY2|ASP aspartoacylase protein-coding chr10-3312 chr10 3124222 3124432 + 7.78 0.000 intron (NM_001242339, intron 18 of 23) intron (NM_001242339, intron 18 of 23) -9777 NR_132758 106633806 NR_132758 SNORD142 SNORA85|SNORD174|ZL68 small nucleolar RNA, C/D box 142 snoRNA chrX-2805 chrX 134642627 134642837 + 7.78 0.000 intron (NM_001316887, intron 2 of 3) intron (NM_001316887, intron 2 of 3) 15739 NM_021796 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr17-5412 chr17 34596909 34597119 + 7.78 0.000 intron (NM_001304438, intron 1 of 8) intron (NM_001304438, intron 1 of 8) 16265 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding KI270719.1-2 KI270719.1 154938 155148 + 7.78 0.000 NA NA NA NA chr1-8138 chr1 11362200 11362410 + 7.78 0.000 Intergenic AluSx|SINE|Alu 89107 NM_013319 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr4-3471 chr4 120850300 120850510 + 7.78 0.000 intron (NM_001300824, intron 3 of 13) intron (NM_001300824, intron 3 of 13) 72461 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr16-5624 chr16 61091323 61091533 + 7.78 0.000 Intergenic L1PA7|LINE|L1 -35662 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr6-4352 chr6 18961350 18961560 + 7.78 0.000 Intergenic L2a|LINE|L2 219025 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr2-9020 chr2 197188160 197188370 + 7.78 0.000 intron (NM_153697, intron 1 of 9) intron (NM_153697, intron 1 of 9) -9726 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr8-5634 chr8 103910106 103910316 + 7.78 0.000 intron (NR_145711, intron 3 of 21) intron (NR_145711, intron 3 of 21) 90991 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr12-2939 chr12 89770502 89770712 + 7.78 0.000 Intergenic ERVL-B4-int|LTR|ERVL -61241 NM_001366526 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr9-7633 chr9 38687487 38687697 + 7.78 0.000 Intergenic Intergenic 66504 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr10-4389 chr10 48841883 48842093 + 7.78 0.000 intron (NM_020945, intron 39 of 61) intron (NM_020945, intron 39 of 61) 72247 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr10-8360 chr10 80336894 80337104 + 7.78 0.000 intron (NM_001370157, intron 5 of 5) L2b|LINE|L2 -7746 NR_070309 84332 Hs.741500 NM_032372 ENSG00000133665 DYDC2 - DPY30 domain containing 2 protein-coding chr13-3915 chr13 56099898 56100108 + 7.78 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 925549 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr10-6025 chr10 125789579 125789789 + 7.78 0.000 intron (NR_136676, intron 9 of 10) intron (NR_136676, intron 9 of 10) -13863 NM_147191 118856 Hs.314141 NM_147191 ENSG00000154485 MMP21 HTX7|MMP-21 matrix metallopeptidase 21 protein-coding chr12-2438 chr12 51995008 51995218 + 7.78 0.000 3' UTR (NM_020327, exon 9 of 9) 3' UTR (NM_020327, exon 9 of 9) -11833 NM_181711 160622 Hs.407202 NM_181711 ENSG00000161835 GRASP TAMALIN general receptor for phosphoinositides 1 associated scaffold protein protein-coding chr6-6550 chr6 133060071 133060281 + 7.78 0.000 Intergenic Intergenic -27904 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr11-9923 chr11 75594166 75594376 + 7.78 0.000 non-coding (NR_145823, exon 2 of 2) non-coding (NR_145823, exon 2 of 2) 11075 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr1-4832 chr1 25096511 25096721 + 7.78 0.000 Intergenic MER20|DNA|hAT-Charlie 73113 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr2-11012 chr2 103831247 103831457 + 7.78 0.000 Intergenic L1PA16|LINE|L1 576980 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr18-1470 chr18 58336610 58336820 + 7.78 0.000 intron (NM_001144965, intron 13 of 30) intron (NM_001144965, intron 13 of 30) -114359 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr2-6728 chr2 30427333 30427543 + 7.78 0.000 Intergenic Intergenic -19808 NM_001002257 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr1-7678 chr1 19408801 19409011 + 7.78 0.000 intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 75389 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr14-1263 chr14 38042580 38042790 + 7.78 0.000 Intergenic Intergenic -140561 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr1-4956 chr1 53122930 53123140 + 7.78 0.000 intron (NR_109858, intron 2 of 10) intron (NR_109858, intron 2 of 10) 19603 NM_006671 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr1-11363 chr1 37755156 37755366 + 7.78 0.000 intron (NM_001099439, intron 3 of 16) intron (NM_001099439, intron 3 of 16) 9859 NM_001099439 284656 Hs.129435 NM_173641 ENSG00000183317 EPHA10 - EPH receptor A10 protein-coding chr8-3745 chr8 22591789 22591999 + 7.78 0.000 intron (NM_021630, intron 9 of 9) intron (NM_021630, intron 9 of 9) -7705 NM_173686 541565 Hs.743508 NM_173686 ENSG00000241852 C8orf58 - chromosome 8 open reading frame 58 protein-coding chr1-11989 chr1 89041082 89041292 + 7.78 0.000 Intergenic Intergenic -18321 NM_018284 2635 Hs.720167 NM_018284 ENSG00000117226 GBP3 - guanylate binding protein 3 protein-coding chr20-2839 chr20 60948429 60948639 + 7.78 0.000 Intergenic MIRb|SINE|MIR -130530 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LINC01718 - long intergenic non-protein coding RNA 1718 ncRNA chr11-5438 chr11 70883604 70883814 + 7.78 0.000 intron (NM_012309, intron 10 of 24) intron (NM_012309, intron 10 of 24) -11341 NR_037437 100500844 NR_037437 ENSG00000263744 MIR3664 mir-3664 microRNA 3664 ncRNA chr20-4294 chr20 50707761 50707971 + 7.78 0.000 Intergenic L2c|LINE|L2 -16324 NR_110890 140876 Hs.372578 NM_080829 ENSG00000042062 RIPOR3 C20orf175|C20orf176|FAM65C RIPOR family member 3 protein-coding chr12-6033 chr12 110367338 110367548 + 7.78 0.000 Intergenic Intergenic 36287 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr18-3143 chr18 40532586 40532796 + 7.78 0.000 Intergenic L1MD2|LINE|L1 466405 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr13-3316 chr13 54318991 54319201 + 7.78 0.000 Intergenic Intergenic -7048 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chrX-3997 chrX 15683615 15683825 + 7.78 0.000 intron (NR_160544, intron 1 of 11) AluSc8|SINE|Alu 8262 NR_160543 340591 Hs.732244 NR_026551 ENSG00000186312 CA5BP1 CA5BL|CA5BP|PRO2325 carbonic anhydrase 5B pseudogene 1 pseudo chr22-3475 chr22 43726589 43726799 + 7.78 0.000 intron (NM_198856, intron 6 of 29) L1MEb|LINE|L1 85611 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr17-3612 chr17 1226717 1226927 + 7.78 0.000 3' UTR (NM_001322842, exon 2 of 2) 3' UTR (NM_001322842, exon 2 of 2) 2900 NM_001322841 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr3-6029 chr3 49603213 49603423 + 7.78 0.000 intron (NM_003458, intron 1 of 11) intron (NM_003458, intron 1 of 11) 48841 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr17-5623 chr17 49278108 49278318 + 7.78 0.000 Intergenic LTR41|LTR|ERVL 10241 NR_106745 102465137 NR_106745 ENSG00000273500 MIR6129 hsa-mir-6129 microRNA 6129 ncRNA chr1-15460 chr1 154454765 154454975 + 7.78 0.000 intron (NM_000565, intron 9 of 9) intron (NM_000565, intron 9 of 9) -47349 NM_182499 126668 Hs.387671 NM_182499 ENSG00000163239 TDRD10 - tudor domain containing 10 protein-coding chr13-3906 chr13 54775514 54775724 + 7.78 0.000 Intergenic MER52A|LTR|ERV1 -398835 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr7-3420 chr7 143361565 143361775 + 7.78 0.000 intron (NM_001371250, intron 1 of 6) intron (NM_001371250, intron 1 of 6) 410 NM_014690 9715 Hs.648908 NM_014690 ENSG00000159784 FAM131B - family with sequence similarity 131 member B protein-coding chr13-1921 chr13 66047558 66047768 + 7.78 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -81234 NR_039692 100616302 NR_039692 ENSG00000263581 MIR548X2 - microRNA 548x-2 ncRNA chr22-3794 chr22 29724068 29724278 + 7.78 0.000 intron (NM_182527, intron 1 of 4) intron (NM_182527, intron 1 of 4) 4170 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr14-4432 chr14 32693353 32693563 + 7.78 0.000 intron (NM_004274, intron 8 of 13) intron (NM_004274, intron 8 of 13) -245421 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr4-7205 chr4 41771610 41771820 + 7.78 0.000 Intergenic Intergenic -22745 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding chr1-8858 chr1 3562555 3562765 + 7.78 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) -1870 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr7-5411 chr7 34774216 34774426 + 7.78 0.000 intron (NR_015356, intron 1 of 4) ERV3-16A3_I-int|LTR|ERVL -16049 NR_033665 404744 Hs.487951 NM_207283 ENSG00000197085 NPSR1-AS1 AAA1 NPSR1 antisense RNA 1 ncRNA chr17-7467 chr17 15007280 15007490 + 7.78 0.000 Intergenic Intergenic -7420 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr6-7675 chr6 85283450 85283660 + 7.78 0.000 Intergenic L1MC1|LINE|L1 106631 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr15-4594 chr15 60138850 60139060 + 7.78 0.000 Intergenic Intergenic 134644 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr3-7176 chr3 187720509 187720719 + 7.78 0.000 TTS (NM_001134738) TTS (NM_001134738) 14293 NM_001134738 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chrX-2782 chrX 131273768 131273978 + 7.78 0.000 exon (NM_001555, exon 20 of 20) exon (NM_001555, exon 20 of 20) 15188 NM_001170963 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr6-4359 chr6 20060185 20060395 + 7.78 0.000 Intergenic Intergenic 152179 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr1-16586 chr1 236256028 236256238 + 7.78 0.000 intron (NM_019891, intron 2 of 15) L1M3de|LINE|L1 25825 NM_019891 56605 Hs.558519 NM_019891 ENSG00000086619 ERO1B ERO1LB|Ero1beta endoplasmic reticulum oxidoreductase 1 beta protein-coding chr10-8044 chr10 63889057 63889267 + 7.78 0.000 Intergenic MER20|DNA|hAT-Charlie -367272 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding KQ458384.1-1 KQ458384.1 51841 52051 + 7.78 0.000 NA NA NA NA chr2-5265 chr2 61210392 61210602 + 7.78 0.000 intron (NM_014709, intron 69 of 79) Tigger3b|DNA|TcMar-Tigger 33079 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr19-3889 chr19 37134601 37134811 + 7.78 0.000 Intergenic SST1|Satellite|centr 37730 NM_199126 199704 Hs.659236 NM_152655 ENSG00000196967 ZNF585A - zinc finger protein 585A protein-coding chr13-1468 chr13 87569290 87569500 + 7.78 0.000 intron (NR_033829, intron 1 of 5) intron (NR_033829, intron 1 of 5) 49345 NR_039722 100616182 NR_039722 ENSG00000266052 MIR4500 - microRNA 4500 ncRNA chr3-8601 chr3 162255723 162255933 + 7.78 0.000 Intergenic Intergenic 759020 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr12-5750 chr12 132730242 132730452 + 7.78 0.000 intron (NM_015114, intron 10 of 12) intron (NM_015114, intron 10 of 12) 19505 NM_138575 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr17-6827 chr17 14393361 14393571 + 7.78 0.000 Intergenic L1MA5|LINE|L1 89726 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr6-7102 chr6 34491215 34491425 + 7.78 0.000 intron (NM_020804, intron 1 of 9) HERV16-int|LTR|ERVL -23552 NM_001199583 29993 Hs.520087 NM_020804 ENSG00000124507 PACSIN1 SDPI protein kinase C and casein kinase substrate in neurons 1 protein-coding chr10-2216 chr10 60448882 60449092 + 7.78 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -59112 NM_020987 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr3-4754 chr3 98531474 98531684 + 7.78 0.000 promoter-TSS (NM_005290) promoter-TSS (NM_005290) -399 NM_005290 2838 Hs.162987 NM_005290 ENSG00000154165 GPR15 BOB G protein-coupled receptor 15 protein-coding chr5-3386 chr5 141795833 141796043 + 7.78 0.000 Intergenic Intergenic 70264 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr13-4291 chr13 98784468 98784678 + 7.78 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -31901 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr17-8562 chr17 79917854 79918064 + 7.78 0.000 non-coding (NR_110850, exon 5 of 6) non-coding (NR_110850, exon 5 of 6) -1398 NR_110851 101928738 Hs.399280 NR_110851 ENSG00000262188 LINC01978 - long intergenic non-protein coding RNA 1978 ncRNA chr14-2789 chr14 20801669 20801879 + 7.78 0.000 exon (NM_002933, exon 2 of 2) exon (NM_002933, exon 2 of 2) 590 NM_198232 6035 Hs.78224 NM_002933 ENSG00000129538 RNASE1 RAC1|RIB1|RNS1 ribonuclease A family member 1, pancreatic protein-coding chr9-5166 chr9 62881287 62881497 + 7.78 0.000 intron (NR_122076, intron 1 of 5) L1MD3|LINE|L1 -15984 NR_126047 728673 Hs.380240 NR_126047 ENSG00000170161 LOC728673 - uncharacterized LOC728673 ncRNA chr19-4793 chr19 34398186 34398396 + 7.78 0.000 intron (NM_001329911, intron 14 of 17) intron (NM_001329911, intron 14 of 17) -6107 NM_001353433 84306 Hs.515344 NM_032346 ENSG00000126249 PDCD2L - programmed cell death 2 like protein-coding chr9-8754 chr9 133107610 133107820 + 7.78 0.000 intron (NM_001271775, intron 6 of 17) intron (NM_001271775, intron 6 of 17) 13525 NM_001271776 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr10-8385 chr10 81891223 81891433 + 7.78 0.000 intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 13641 NR_163253 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr2-13541 chr2 152416201 152416411 + 7.78 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 81132 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr5-2888 chr5 98797346 98797556 + 7.78 0.000 TTS (NM_001366509) TTS (NM_001366509) 23788 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr17-6618 chr17 62079300 62079510 + 7.78 0.000 Intergenic Intergenic -14127 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr2-11930 chr2 25177146 25177356 + 7.78 0.000 Intergenic Intergenic -8400 NM_001035256 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr20-1610 chr20 10030492 10030702 + 7.78 0.000 intron (NR_040710, intron 3 of 4) intron (NR_040710, intron 3 of 4) -4390 NM_198798 63926 Hs.70903 NM_022096 ENSG00000132623 ANKEF1 ANKRD5 ankyrin repeat and EF-hand domain containing 1 protein-coding chr1-15780 chr1 175405436 175405646 + 7.78 0.000 intron (NM_003285, intron 3 of 22) intron (NM_003285, intron 3 of 22) -212554 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr4-6175 chr4 41148350 41148560 + 7.78 0.000 intron (NM_173075, intron 1 of 16) MIRc|SINE|MIR 66087 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr18-2055 chr18 47692692 47692902 + 7.78 0.000 Intergenic L2|LINE|L2 237862 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr1-6769 chr1 77394970 77395180 + 7.78 0.000 intron (NM_012093, intron 6 of 13) intron (NM_012093, intron 6 of 13) 111988 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr2-12640 chr2 73588064 73588274 + 7.78 0.000 intron (NM_015120, intron 16 of 22) L1PB2|LINE|L1 54253 NM_003960 9027 Hs.14637 NM_003960 ENSG00000144035 NAT8 ATase2|CCNAT|CML1|GLA|Hcml1|TSC501|TSC510 N-acetyltransferase 8 (putative) protein-coding chrX-3388 chrX 155099019 155099229 + 7.78 0.000 intron (NM_001018055, intron 7 of 10) MLT1J|LTR|ERVL-MaLR 27704 NM_001018055 79184 Hs.558537 NM_024332 ENSG00000185515 BRCC3 BRCC36|C6.1A|CXorf53 BRCA1/BRCA2-containing complex subunit 3 protein-coding chr11-3154 chr11 58830819 58831029 + 7.78 0.000 Intergenic MER52A|LTR|ERV1 13780 NM_145016 219970 Hs.254271 NM_145016 ENSG00000156689 GLYATL2 BXMAS2-10|GATF-B glycine-N-acyltransferase like 2 protein-coding chr3-7892 chr3 129893267 129893477 + 7.78 0.000 promoter-TSS (NR_037893) promoter-TSS (NR_037893) 204 NM_001128224 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr1-14482 chr1 48207680 48207890 + 7.78 0.000 Intergenic Intergenic -14931 NM_001011547 200010 Hs.37890 NM_001011547 ENSG00000117834 SLC5A9 SGLT4 solute carrier family 5 member 9 protein-coding chrX-2831 chrX 137047716 137047926 + 7.78 0.000 Intergenic Intergenic -16147 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr1-11362 chr1 37487307 37487517 + 7.78 0.000 Intergenic Intergenic 7182 NR_106790 102465438 NR_106790 ENSG00000283724 MIR6732 hsa-mir-6732 microRNA 6732 ncRNA chr19-6415 chr19 14756114 14756324 + 7.78 0.000 intron (NM_013447, intron 12 of 20) intron (NM_013447, intron 12 of 20) 20708 NM_001271052 30817 Hs.531619 NM_013447 ENSG00000127507 ADGRE2 CD312|CD97|EMR2|VBU adhesion G protein-coupled receptor E2 protein-coding chr8-2150 chr8 32262995 32263205 + 7.78 0.000 intron (NM_013962, intron 1 of 4) L2a|LINE|L2 -177646 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr3-6328 chr3 79419414 79419624 + 7.78 0.000 intron (NR_110133, intron 1 of 2) LTR107_Mam|LTR|LTR 7792 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr1-11063 chr1 225596127 225596337 + 7.78 0.000 intron (NM_001008493, intron 1 of 14) intron (NM_001008493, intron 1 of 14) 56891 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr1-7653 chr1 9488391 9488601 + 7.78 0.000 Intergenic L2|LINE|L2 -50969 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr6-5150 chr6 125348504 125348714 + 7.78 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -46642 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chr1-4817 chr1 22155746 22155956 + 7.78 0.000 Intergenic MIRc|SINE|MIR -12754 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr10-8384 chr10 81732981 81733191 + 7.78 0.000 Intergenic LTR1A2|LTR|ERV1 -142108 NM_001370083 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr1-10711 chr1 193543371 193543581 + 7.78 0.000 Intergenic Intergenic 238731 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr12-3820 chr12 75722832 75723042 + 7.78 0.000 Intergenic Intergenic -211328 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr7-5504 chr7 43824764 43824974 + 7.78 0.000 Intergenic LTR2|LTR|ERV1 44648 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr7-9315 chr7 128340479 128340689 + 7.78 0.000 intron (NM_018077, intron 1 of 18) MSTC|LTR|ERVL-MaLR 3324 NM_018077 55131 Hs.274263 NM_018077 ENSG00000106344 RBM28 ANES RNA binding motif protein 28 protein-coding chr2-11687 chr2 8864825 8865035 + 7.78 0.000 intron (NR_135604, intron 9 of 12) intron (NR_135604, intron 9 of 12) -27317 NM_001348731 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr20-1839 chr20 4160805 4161015 + 7.78 0.000 intron (NM_001270691, intron 1 of 7) intron (NM_001270691, intron 1 of 7) 12082 NM_175840 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr13-2847 chr13 109369129 109369339 + 7.78 0.000 Intergenic Intergenic -31462 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr4-4372 chr4 40198689 40198899 + 7.78 0.000 intron (NM_001278363, intron 1 of 2) intron (NM_001278363, intron 1 of 2) 1763 NM_004310 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chr13-3199 chr13 113289877 113290087 + 7.78 0.000 Intergenic MSTB|LTR|ERVL-MaLR -7257 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr1-8619 chr1 197615140 197615350 + 7.78 0.000 intron (NR_125340, intron 10 of 19) L2c|LINE|L2 160235 NM_001300858 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr15-5298 chr15 101307493 101307703 + 7.78 0.000 non-coding (NR_045387, exon 1 of 1) non-coding (NR_045387, exon 1 of 1) 1706 NR_045387 100507472 Hs.498494 NR_045387 LOC100507472 - uncharacterized LOC100507472 ncRNA chr17-3500 chr17 50621507 50621717 + 7.78 0.000 intron (NM_198385, intron 34 of 36) intron (NM_198385, intron 34 of 36) -13269 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr8-5232 chr8 123018939 123019149 + 7.78 0.000 intron (NM_024295, intron 7 of 7) intron (NM_024295, intron 7 of 7) 6728 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr14-2697 chr14 83852774 83852984 + 7.78 0.000 Intergenic AluY|SINE|Alu 1210247 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr15-3868 chr15 91282575 91282785 + 7.78 0.000 intron (NM_001323034, intron 10 of 11) MIRb|SINE|MIR -180659 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr9-3281 chr9 38017185 38017395 + 7.78 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 51937 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr4-4944 chr4 126375602 126375812 + 7.78 0.000 Intergenic Intergenic 868448 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr11-9414 chr11 58525489 58525699 + 7.78 0.000 Intergenic Intergenic -17489 NM_001005218 219968 Hs.553647 NM_001005218 ENSG00000198283 OR5B21 - olfactory receptor family 5 subfamily B member 21 protein-coding chr10-8278 chr10 76620671 76620881 + 7.78 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -267268 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr3-9847 chr3 78977964 78978174 + 7.78 0.000 intron (NM_002941, intron 3 of 30) intron (NM_002941, intron 3 of 30) 41390 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr13-2931 chr13 23608930 23609140 + 7.78 0.000 intron (NM_001354985, intron 3 of 8) intron (NM_001354985, intron 3 of 8) 29675 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr18-2748 chr18 80097577 80097787 + 7.78 0.000 Intergenic MER89-int|LTR|ERV1 -11580 NM_014913 22850 Hs.131915 NM_014913 ENSG00000101544 ADNP2 ZNF508 ADNP homeobox 2 protein-coding chr16-3748 chr16 19440120 19440330 + 7.78 0.000 exon (NM_001308161, exon 3 of 21) exon (NM_001308161, exon 3 of 21) -16236 NM_024780 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr6-6639 chr6 155352827 155353037 + 7.78 0.000 Intergenic L1M3a|LINE|L1 -38448 NM_016020 51106 Hs.279908 NM_016020 ENSG00000029639 TFB1M CGI-75|CGI75|mtTFB|mtTFB1 transcription factor B1, mitochondrial protein-coding chr3-7925 chr3 145683408 145683618 + 7.78 0.000 Intergenic Intergenic 385672 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr1-12783 chr1 79304190 79304400 + 7.78 0.000 Intergenic MIRc|SINE|MIR -297565 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr10-3868 chr10 35453915 35454125 + 7.78 0.000 intron (NM_001282853, intron 2 of 10) MER112|DNA|hAT-Charlie 117146 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr19-3761 chr19 55530154 55530364 + 7.78 0.000 exon (NM_001370096, exon 4 of 4) exon (NM_001370096, exon 4 of 4) 6874 NM_001370096 646643 Hs.532676 NM_001101401 ENSG00000187550 SBK2 SGK069 SH3 domain binding kinase family member 2 protein-coding chr1-12788 chr1 81521757 81521967 + 7.78 0.000 intron (NR_125943, intron 1 of 3) intron (NR_125943, intron 1 of 3) 35840 NR_125943 101927434 Hs.130394 NR_125943 ENSG00000234953 LOC101927434 - uncharacterized LOC101927434 ncRNA chr4-5965 chr4 169485805 169486015 + 7.78 0.000 intron (NM_001199400, intron 20 of 32) AluJb|SINE|Alu 126673 NM_001199398 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr2-9583 chr2 240964650 240964860 + 7.78 0.000 intron (NM_001351305, intron 22 of 31) intron (NM_001351305, intron 22 of 31) 2696 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr8-6186 chr8 34242020 34242230 + 7.78 0.000 Intergenic Intergenic -541796 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr2-6832 chr2 66028911 66029121 + 7.78 0.000 Intergenic AluYb8|SINE|Alu 329312 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr14-1777 chr14 101480690 101480900 + 7.78 0.000 Intergenic Intergenic 38719 NR_135240 100507277 Hs.123543 NR_135240 ENSG00000259082 LINC02314 - long intergenic non-protein coding RNA 2314 ncRNA chr16-3128 chr16 71462042 71462252 + 7.78 0.000 promoter-TSS (NM_001304494) promoter-TSS (NM_001304494) 100 NM_145911 7571 Hs.656643 NM_145911 ENSG00000167377 ZNF23 KOX16|ZNF359|ZNF612|Zfp612 zinc finger protein 23 protein-coding chr14-3447 chr14 99745447 99745657 + 7.78 0.000 Intergenic Intergenic -47861 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr3-3848 chr3 33145484 33145694 + 7.78 0.000 3' UTR (NM_006371, exon 7 of 7) 3' UTR (NM_006371, exon 7 of 7) 31631 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr6-8062 chr6 122553908 122554118 + 7.78 0.000 intron (NM_001270393, intron 3 of 7) intron (NM_001270393, intron 3 of 7) -56219 NM_032471 5570 Hs.741340 NM_032471 ENSG00000135549 PKIB PRKACN2 cAMP-dependent protein kinase inhibitor beta protein-coding chr2-8089 chr2 74945931 74946141 + 7.78 0.000 Intergenic L1MB7|LINE|L1 -12607 NM_019896 56655 Hs.469060 NM_019896 ENSG00000115350 POLE4 YHHQ1|p12 DNA polymerase epsilon 4, accessory subunit protein-coding chr6-4736 chr6 67449800 67450010 + 7.78 0.000 Intergenic L2c|LINE|L2 -605446 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr6-8037 chr6 119796321 119796531 + 7.78 0.000 intron (NR_134600, intron 2 of 3) L1PA17|LINE|L1 -218753 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr4-6059 chr4 6489161 6489371 + 7.78 0.000 intron (NM_001206994, intron 2 of 9) L1MEc|LINE|L1 -16652 NM_001363388 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr1-16574 chr1 235133273 235133483 + 7.78 0.000 intron (NR_144492, intron 8 of 8) L1ME4c|LINE|L1 -4541 NM_014765 9804 Hs.533192 NM_014765 ENSG00000173726 TOMM20 MAS20|MOM19|TOM20 translocase of outer mitochondrial membrane 20 protein-coding chr3-5702 chr3 14753772 14753982 + 7.78 0.000 intron (NM_001184957, intron 12 of 16) (AAAACA)n|Simple_repeat|Simple_repeat 57537 NR_135245 152274 Hs.434128 NR_135245 ENSG00000260902 LINC02011 - long intergenic non-protein coding RNA 2011 ncRNA chr7-6786 chr7 25383601 25383811 + 7.78 0.000 Intergenic Intergenic -155220 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr2-12728 chr2 81339553 81339763 + 7.78 0.000 Intergenic L1MB4|LINE|L1 127288 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr7-6725 chr7 4783735 4783945 + 7.78 0.000 intron (NR_157345, intron 5 of 16) intron (NR_157345, intron 5 of 16) 4799 NR_039800 100616465 NR_039800 ENSG00000264474 MIR4656 - microRNA 4656 ncRNA chr16-4337 chr16 30797978 30798188 + 7.78 0.000 Intergenic Intergenic -10878 NM_001345970 23361 Hs.301094 NM_001080417 ENSG00000102870 ZNF629 ZNF|ZNF65 zinc finger protein 629 protein-coding chr8-7497 chr8 142835351 142835561 + 7.78 0.000 intron (NM_002066, intron 1 of 3) L1MEg|LINE|L1 655 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr6-5099 chr6 119515615 119515825 + 7.78 0.000 Intergenic Intergenic -24418 NR_046100 285762 Hs.571063 NR_046100 LOC285762 - uncharacterized LOC285762 ncRNA chr10-8937 chr10 116632336 116632546 + 7.78 0.000 intron (NR_103727, intron 8 of 12) L2b|LINE|L2 11488 NR_103727 5408 Hs.423598 NM_005396 ENSG00000266200 PNLIPRP2 PLRP2 pancreatic lipase related protein 2 (gene/pseudogene) protein-coding chr9-6487 chr9 95570078 95570288 + 7.78 0.000 Intergenic Intergenic -53126 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr6-4367 chr6 20711952 20712162 + 7.78 0.000 intron (NM_017774, intron 5 of 15) MLT1L|LTR|ERVL-MaLR 177600 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr14-3779 chr14 56628746 56628956 + 7.78 0.000 intron (NM_017799, intron 12 of 15) L1MD2|LINE|L1 49053 NM_017799 54916 Hs.497253 NM_017799 ENSG00000070269 TMEM260 C14orf101|SHDRA transmembrane protein 260 protein-coding chr12-7762 chr12 95304917 95305127 + 7.78 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -3398 NR_029895 442903 NR_029895 ENSG00000199172 MIR331 MIRN331|hsa-mir-331|mir-331 microRNA 331 ncRNA chr8-2530 chr8 25232482 25232692 + 7.78 0.000 intron (NM_024940, intron 1 of 51) MLT1A0|LTR|ERVL-MaLR 47898 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr3-4639 chr3 25022013 25022223 + 7.78 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 192795 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr7-7888 chr7 6350596 6350806 + 7.78 0.000 Intergenic Intergenic -1734 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chrX-3468 chrX 31010743 31010953 + 7.78 0.000 Intergenic MER51B|LTR|ERV1 61193 NM_031894 53940 Hs.333125 NM_031894 ENSG00000132446 FTHL17 CT38 ferritin heavy chain like 17 protein-coding chr3-3893 chr3 43162310 43162520 + 7.78 0.000 Intergenic MER131|DNA?|DNA? -56336 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chr9-5807 chr9 129071807 129072017 + 7.78 0.000 non-coding (NR_138425, exon 16 of 16) non-coding (NR_138425, exon 16 of 16) -9199 NM_001135917 57171 Hs.21701 NM_020438 ENSG00000167130 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding chr12-2422 chr12 49297260 49297470 + 7.78 0.000 non-coding (NR_120449, exon 5 of 8) non-coding (NR_120449, exon 5 of 8) 2218 NM_006262 5630 Hs.37044 NM_006262 ENSG00000135406 PRPH NEF4|PRPH1 peripherin protein-coding chr12-4085 chr12 55271293 55271503 + 7.78 0.000 Intergenic L1MA9|LINE|L1 23834 NM_001005493 283365 Hs.554555 NM_001005493 ENSG00000188324 OR6C6 - olfactory receptor family 6 subfamily C member 6 protein-coding chr5-8155 chr5 102315224 102315434 + 7.78 0.000 Intergenic Intergenic -19045 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr1-7832 chr1 66085046 66085256 + 7.78 0.000 intron (NM_001037340, intron 1 of 14) MER5A|DNA|hAT-Charlie -34433 NR_123718 101927139 Hs.127908 NR_123718 ENSG00000227466 LOC101927139 - uncharacterized LOC101927139 ncRNA chr3-8226 chr3 48196433 48196643 + 7.78 0.000 promoter-TSS (NR_039645) promoter-TSS (NR_039645) -26 NR_039645 100616407 NR_039645 ENSG00000265483 MIR4443 mir-4443 microRNA 4443 ncRNA chr7-7997 chr7 16296975 16297185 + 7.78 0.000 intron (NR_160656, intron 3 of 7) intron (NR_160656, intron 3 of 7) 86594 NR_038947 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr1-8107 chr1 9043299 9043509 + 7.78 0.000 intron (NM_001328621, intron 1 of 8) intron (NM_001328621, intron 1 of 8) -17059 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr12-6163 chr12 8870133 8870343 + 7.78 0.000 intron (NM_001282424, intron 22 of 24) intron (NM_001282424, intron 22 of 24) 25234 NM_001282424 144568 Hs.620532 NM_144670 ENSG00000166535 A2ML1 CPAMD9|OMS|p170 alpha-2-macroglobulin like 1 protein-coding chr1-11492 chr1 116282916 116283126 + 7.78 0.000 Intergenic L1M1|LINE|L1 -90223 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr20-1440 chr20 46051479 46051689 + 7.78 0.000 intron (NM_020708, intron 17 of 25) intron (NM_020708, intron 17 of 25) 22369 NM_020708 57468 Hs.21413 NM_020708 ENSG00000124140 SLC12A5 EIEE34|EIG14|KCC2|hKCC2 solute carrier family 12 member 5 protein-coding chr20-3604 chr20 5282500 5282710 + 7.78 0.000 Intergenic L1PB1|LINE|L1 34127 NM_144773 128674 Hs.375029 NM_144773 ENSG00000101292 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding chr6-6135 chr6 164521775 164521985 + 7.78 0.000 Intergenic L1PA10|LINE|L1 300183 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr2-7323 chr2 240894933 240895143 + 7.78 0.000 intron (NM_001085437, intron 1 of 4) intron (NM_001085437, intron 1 of 4) 1118 NM_001085437 79919 Hs.193745 NM_024861 ENSG00000172478 MAB21L4 C2orf54 mab-21 like 4 protein-coding chr6-2855 chr6 2970163 2970373 + 7.78 0.000 intron (NM_001195291, intron 1 of 7) intron (NM_001195291, intron 1 of 7) 780 NM_001271823 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr17-5256 chr17 18148603 18148813 + 7.78 0.000 intron (NM_016239, intron 31 of 64) intron (NM_016239, intron 31 of 64) -35120 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr4-7468 chr4 70761411 70761621 + 7.78 0.000 intron (NM_001291994, intron 2 of 13) MIRc|SINE|MIR 27106 NM_001345840 22902 Hs.740904 NM_014961 ENSG00000018189 RUFY3 RIPX|SINGAR1|ZFYVE30 RUN and FYVE domain containing 3 protein-coding chr12-7076 chr12 42704978 42705188 + 7.78 0.000 intron (NR_135028, intron 2 of 3) LTR33A|LTR|ERVL 12867 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr2-7397 chr2 8403451 8403661 + 7.78 0.000 Intergenic Intergenic -75137 NR_152741 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr9-5899 chr9 132437108 132437318 + 7.78 0.000 intron (NM_001282957, intron 1 of 5) intron (NM_001282957, intron 1 of 5) 27002 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr5-5104 chr5 99352877 99353087 + 7.78 0.000 Intergenic MER52A|LTR|ERV1 -181008 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr12-3518 chr12 130425909 130426119 + 7.78 0.000 intron (NM_001351226, intron 15 of 21) intron (NM_001351226, intron 15 of 21) 88127 NM_004764 9271 Hs.405659 NM_004764 ENSG00000125207 PIWIL1 CT80.1|HIWI|MIWI|PIWI piwi like RNA-mediated gene silencing 1 protein-coding chr2-6031 chr2 109277838 109278048 + 7.78 0.000 intron (NM_001099289, intron 1 of 9) AluJr|SINE|Alu 35682 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr16-6807 chr16 79789697 79789907 + 7.78 0.000 intron (NR_104660, intron 1 of 3) intron (NR_104660, intron 1 of 3) -5447 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr1-11987 chr1 88486766 88486976 + 7.78 0.000 Intergenic Intergenic -197273 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr12-5025 chr12 84922723 84922933 + 7.78 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -9999 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr5-3044 chr5 18477890 18478100 + 7.78 0.000 Intergenic Intergenic 670721 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr19-3531 chr19 43363709 43363919 + 7.78 0.000 TTS (NM_020406) TTS (NM_020406) 10128 NM_020406 57126 Hs.232165 NM_020406 ENSG00000204936 CD177 HNA-2a|HNA2A|NB1|NB1 GP|PRV-1|PRV1 CD177 molecule protein-coding chr3-5807 chr3 28612992 28613202 + 7.78 0.000 intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 37819 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr8-2348 chr8 23747926 23748136 + 7.78 0.000 Intergenic Intergenic -41433 NM_001136271 137814 Hs.532654 NM_001136271 ENSG00000180053 NKX2-6 CSX2|CTHM|NKX2F|NKX4-2 NK2 homeobox 6 protein-coding chr10-2536 chr10 58240643 58240853 + 7.78 0.000 intron (NM_152230, intron 1 of 5) L1MCc|LINE|L1 27146 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr15-4547 chr15 56582651 56582861 + 7.78 0.000 Intergenic MER65-int|LTR|ERV1 -117619 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr6-7591 chr6 75065964 75066174 + 7.78 0.000 Intergenic Intergenic 62713 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr7-5490 chr7 43019699 43019909 + 7.78 0.000 Intergenic LTR39|LTR|ERV1 87428 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr20-2026 chr20 63261265 63261475 + 7.78 0.000 non-coding (NR_024389, exon 1 of 1) non-coding (NR_024389, exon 1 of 1) -6907 NM_152864 128414 Hs.46627 NM_152864 ENSG00000101198 NKAIN4 C20orf58|FAM77A|bA261N11.2 sodium/potassium transporting ATPase interacting 4 protein-coding chr1-13051 chr1 173183177 173183387 + 7.78 0.000 TTS (NM_003326) TTS (NM_003326) 22250 NM_001297562 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding KI270760.1-1 KI270760.1 56988 57198 + 7.78 0.000 NA NA NA NA chr7-5927 chr7 99006545 99006755 + 7.78 0.000 intron (NM_003496, intron 67 of 70) intron (NM_003496, intron 67 of 70) -6515 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr2-7543 chr2 23061357 23061567 + 7.78 0.000 Intergenic Intergenic -323717 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr3-6133 chr3 55360849 55361059 + 7.78 0.000 Intergenic Intergenic 120444 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr7-5267 chr7 21266871 21267081 + 7.78 0.000 Intergenic Intergenic -161107 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr4-6414 chr4 126029012 126029222 + 7.78 0.000 Intergenic Intergenic 521858 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr5-3821 chr5 98528275 98528485 + 7.78 0.000 Intergenic Intergenic -240252 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr2-9750 chr2 80372235 80372445 + 7.78 0.000 intron (NM_001282599, intron 1 of 11) intron (NM_001282599, intron 1 of 11) 58961 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr6-4890 chr6 91147116 91147326 + 7.78 0.000 Intergenic Intergenic -374439 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr13-3521 chr13 22453775 22453985 + 7.78 0.000 Intergenic L1MC3|LINE|L1 243595 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA chr13-4201 chr13 91659195 91659405 + 7.78 0.000 intron (NM_004466, intron 2 of 7) intron (NM_004466, intron 2 of 7) 260679 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr17-6124 chr17 81272298 81272508 + 7.78 0.000 intron (NM_001037984, intron 9 of 15) intron (NM_001037984, intron 9 of 15) 22904 NM_138570 124565 Hs.352240 NM_138570 ENSG00000157637 SLC38A10 PP1744 solute carrier family 38 member 10 protein-coding chr4-4401 chr4 42744594 42744804 + 7.78 0.000 Intergenic Intergenic -87594 NM_001105529 10396 Hs.435052 NM_006095 ENSG00000124406 ATP8A1 ATPASEII|ATPIA|ATPP2 ATPase phospholipid transporting 8A1 protein-coding chr18-2661 chr18 49618420 49618630 + 7.78 0.000 Intergenic AluSg7|SINE|Alu 56468 NM_001308006 9388 Hs.465102 NM_006033 ENSG00000101670 LIPG EDL|EL|PRO719 lipase G, endothelial type protein-coding chr16-3758 chr16 26185529 26185739 + 7.78 0.000 Intergenic Intergenic 160397 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr10-7834 chr10 44428017 44428227 + 7.78 0.000 Intergenic MIRc|SINE|MIR -43025 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr3-4768 chr3 107660381 107660591 + 7.78 0.000 intron (NM_001276286, intron 3 of 16) intron (NM_001276286, intron 3 of 16) 137524 NM_001142568 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr6-3845 chr6 42003947 42004157 + 7.78 0.000 intron (NM_001136017, intron 1 of 4) intron (NM_001136017, intron 1 of 4) 44842 NM_001136126 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr8-5617 chr8 98867668 98867878 + 7.78 0.000 intron (NM_001256312, intron 3 of 12) MIR|SINE|MIR -42085 NM_006281 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr14-2843 chr14 28333378 28333588 + 7.78 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 431836 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr1-7444 chr1 54485865 54486075 + 7.78 0.000 Intergenic AluYh9|SINE|Alu -62258 NM_015547 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr2-11681 chr2 7918393 7918603 + 7.78 0.000 Intergenic L2|LINE|L2 -18843 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr11-6613 chr11 73717230 73717440 + 7.78 0.000 intron (NM_002869, intron 4 of 7) intron (NM_002869, intron 4 of 7) 42758 NM_001243719 5870 Hs.503222 NM_002869 ENSG00000175582 RAB6A RAB6 RAB6A, member RAS oncogene family protein-coding chr12-7565 chr12 74453265 74453475 + 7.78 0.000 Intergenic LTR69|LTR|ERVL -84465 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr4-7215 chr4 42235134 42235344 + 7.78 0.000 Intergenic Intergenic -82584 NM_207406 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr2-13304 chr2 129907918 129908128 + 7.78 0.000 Intergenic Intergenic -15154 NR_110285 101927924 Hs.570248 NR_110285 ENSG00000237574 LINC01856 - long intergenic non-protein coding RNA 1856 ncRNA chr10-5635 chr10 96678949 96679159 + 7.78 0.000 intron (NM_152309, intron 2 of 16) intron (NM_152309, intron 2 of 16) 41460 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr4-4019 chr4 1968086 1968296 + 7.78 0.000 intron (NM_001042424, intron 18 of 21) L1MEd|LINE|L1 -6445 NR_003004 677770 Hs.676951 NR_003004 ENSG00000249784 SCARNA22 ACA11 small Cajal body-specific RNA 22 ncRNA chr7-4639 chr7 29932272 29932482 + 7.78 0.000 intron (NM_001145514, intron 6 of 7) intron (NM_001145514, intron 6 of 7) 57424 NM_014766 9805 Hs.520740 NM_014766 ENSG00000136193 SCRN1 SES1 secernin 1 protein-coding chr8-2280 chr8 101006227 101006437 + 7.78 0.000 Intergenic Intergenic -45722 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr5-7288 chr5 14292760 14292970 + 7.78 0.000 intron (NM_007118, intron 5 of 56) intron (NM_007118, intron 5 of 56) 149523 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr14-1259 chr14 23141920 23142130 + 7.78 0.000 intron (NM_001267036, intron 2 of 8) intron (NM_001267036, intron 2 of 8) 12368 NM_182728 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr22-3722 chr22 25634852 25635062 + 7.78 0.000 intron (NM_001362778, intron 2 of 19) L1MC4|LINE|L1 70282 NM_005160 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr5-7850 chr5 72072779 72072989 + 7.78 0.000 Intergenic Intergenic -34591 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr20-1881 chr20 46297192 46297402 + 7.78 0.000 intron (NM_021248, intron 1 of 11) intron (NM_021248, intron 1 of 11) 11201 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr10-3958 chr10 107184767 107184977 + 7.78 0.000 Intergenic L1PREC2|LINE|L1 -20166 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr18-1044 chr18 7741021 7741231 + 7.78 0.000 intron (NM_002845, intron 1 of 30) MIRb|SINE|MIR 173810 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr21-400 chr21 38913019 38913229 + 7.78 0.000 intron (NR_120405, intron 2 of 3) intron (NR_120405, intron 2 of 3) 25305 NR_120405 400867 Hs.689509 NR_120405 LOC400867 - uncharacterized LOC400867 ncRNA chr18-3060 chr18 30862530 30862740 + 7.78 0.000 Intergenic Intergenic 180107 NM_001941 1825 Hs.41690 NM_001941 ENSG00000134762 DSC3 CDHF3|DSC|DSC1|DSC2|DSC4|HT-CP desmocollin 3 protein-coding chr14-4404 chr14 30457456 30457666 + 7.78 0.000 intron (NR_151720, intron 3 of 3) THE1C|LTR|ERVL-MaLR -101562 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr2-1774 chr2 202635797 202636007 + 7.78 0.000 intron (NM_173511, intron 1 of 7) G-rich|Low_complexity|Low_complexity 933 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr1-14398 chr1 44277337 44277547 + 7.78 0.000 intron (NM_001301698, intron 6 of 7) L2b|LINE|L2 -24883 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr5-4097 chr5 67910930 67911140 + 7.78 0.000 Intergenic MIR|SINE|MIR 117822 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA GL000214.1-3 GL000214.1 113133 113343 + 7.78 0.000 NA NA NA NA chr20-2950 chr20 23441733 23441943 + 7.78 0.000 intron (NM_138283, intron 2 of 3) intron (NM_138283, intron 2 of 3) 2153 NM_138283 128817 Hs.352134 NM_138283 ENSG00000125823 CSTL1 CTES1|RCET11|dJ322G13.4 cystatin like 1 protein-coding chr15-4073 chr15 69951781 69951991 + 7.78 0.000 Intergenic L1ME4b|LINE|L1 116652 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr4-2313 chr4 85953535 85953745 + 7.78 0.000 intron (NM_031305, intron 2 of 6) MER5B|DNA|hAT-Charlie 23624 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr9-6448 chr9 84413281 84413491 + 7.78 0.000 Intergenic HAL1b|LINE|L1 -44659 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr8-5196 chr8 106636100 106636310 + 7.78 0.000 intron (NM_018002, intron 3 of 15) intron (NM_018002, intron 3 of 15) -21603 NM_181354 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr5-2072 chr5 142433748 142433958 + 7.78 0.000 intron (NR_120664, intron 3 of 3) intron (NR_120664, intron 3 of 3) 108560 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr20-2529 chr20 35315848 35316058 + 7.78 0.000 intron (NM_001184977, intron 5 of 7) intron (NM_001184977, intron 5 of 7) -23528 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr20-3439 chr20 48561968 48562178 + 7.78 0.000 Intergenic Intergenic 202162 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr2-8051 chr2 72156044 72156254 + 7.78 0.000 Intergenic Intergenic -8287 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr1-10412 chr1 157302173 157302383 + 7.78 0.000 Intergenic MER61F|LTR|ERV1 -163687 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr1-12758 chr1 70515968 70516178 + 7.78 0.000 Intergenic L2|LINE|L2 104805 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr7-3335 chr7 74219315 74219525 + 7.78 0.000 intron (NM_032463, intron 4 of 13) intron (NM_032463, intron 4 of 13) 9414 NM_032463 7462 Hs.741249 NM_014146 ENSG00000086730 LAT2 HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 linker for activation of T cells family member 2 protein-coding chr2-13390 chr2 138763845 138764055 + 7.78 0.000 intron (NM_007226, intron 1 of 1) L2c|LINE|L2 16440 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chr19-3103 chr19 9883229 9883439 + 7.78 0.000 intron (NM_058164, intron 1 of 5) intron (NM_058164, intron 1 of 5) -25159 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr13-2349 chr13 35723283 35723493 + 7.78 0.000 Intergenic Intergenic 25661 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr2-8692 chr2 151879210 151879420 + 7.78 0.000 intron (NM_000726, intron 4 of 13) MER135|DNA|DNA -50894 NM_177985 26225 Hs.470233 NM_012097 ENSG00000162980 ARL5A ARFLP5|ARL5 ADP ribosylation factor like GTPase 5A protein-coding chr8-4899 chr8 81463039 81463249 + 7.78 0.000 Intergenic L1PA10|LINE|L1 -1621 NM_001080526 646480 Hs.653176 NM_001080526 ENSG00000205186 FABP9 PERF|PERF15|T-FABP|TLBP fatty acid binding protein 9 protein-coding chr9-8753 chr9 133023343 133023553 + 7.78 0.000 Intergenic Intergenic 3018 NR_132981 106635684 NR_132981 SNORD141B - small nucleolar RNA, C/D box 141B snoRNA chr5-3549 chr5 39476127 39476337 + 7.78 0.000 Intergenic Intergenic -44199 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr17-3909 chr17 55511098 55511308 + 7.78 0.000 Intergenic Intergenic -89368 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr5-8549 chr5 135804016 135804226 + 7.78 0.000 intron (NM_001349335, intron 3 of 10) SATR1|Satellite|Satellite -1046 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr17-5556 chr17 44555986 44556196 + 7.78 0.000 Intergenic Intergenic -1393 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr2-14750 chr2 239943972 239944182 + 7.78 0.000 promoter-TSS (NR_039949) promoter-TSS (NR_039949) -983 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr14-3175 chr14 70185764 70185974 + 7.78 0.000 intron (NM_033262, intron 1 of 7) L2a|LINE|L2 -1239 NR_135825 646548 NR_135825 LOC646548 - ADAM metallopeptidase domain 20 pseudogene pseudo chr10-2539 chr10 60351235 60351445 + 7.78 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 38535 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr11-10316 chr11 108733515 108733725 + 7.78 0.000 intron (NM_004398, intron 13 of 17) MIRc|SINE|MIR 68551 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr14-3958 chr14 21680962 21681172 + 7.78 0.000 Intergenic MER57-int|LTR|ERV1 -10050 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr19-4181 chr19 42013988 42014198 + 7.78 0.000 intron (NM_002088, intron 14 of 18) intron (NM_002088, intron 14 of 18) -19863 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr7-6670 chr7 145441730 145441940 + 7.78 0.000 Intergenic Intergenic -605782 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr5-8211 chr5 107914538 107914748 + 7.78 0.000 intron (NM_001163315, intron 7 of 8) MLT1K|LTR|ERVL-MaLR -243706 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr4-5042 chr4 141702901 141703111 + 7.78 0.000 intron (NM_172175, intron 3 of 9) L1PBa|LINE|L1 66423 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr6-7453 chr6 55820062 55820272 + 7.78 0.000 intron (NM_001329754, intron 1 of 5) intron (NM_001329754, intron 1 of 5) 55423 NM_001329756 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr7-9102 chr7 106358147 106358357 + 7.78 0.000 Intergenic ERVL-E-int|LTR|ERVL -73269 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr4-8381 chr4 149798042 149798252 + 7.78 0.000 intron (NM_001363507, intron 2 of 13) L1MA2|LINE|L1 17696 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr16-6302 chr16 47113148 47113358 + 7.78 0.000 intron (NM_001201477, intron 6 of 8) intron (NM_001201477, intron 6 of 8) 30692 NM_001201477 81831 Hs.645802 NM_018092 ENSG00000171208 NETO2 BTCL2|NEOT2 neuropilin and tolloid like 2 protein-coding chr1-15688 chr1 167649270 167649480 + 7.78 0.000 intron (NM_001322923, intron 1 of 5) MamRep1879|DNA|hAT-Tip100? 19143 NM_001322924 92241 Hs.493867 NM_052862 ENSG00000198771 RCSD1 CAPZIP|MK2S4 RCSD domain containing 1 protein-coding chr3-9573 chr3 54274240 54274450 + 7.78 0.000 intron (NM_018398, intron 2 of 37) (TTTC)n|Simple_repeat|Simple_repeat 151793 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr2-9480 chr2 235827559 235827769 + 7.78 0.000 intron (NM_001037131, intron 9 of 17) intron (NM_001037131, intron 9 of 17) -309743 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr8-2729 chr8 101600530 101600740 + 7.78 0.000 intron (NM_024915, intron 8 of 15) MIR1_Amn|SINE|MIR 108196 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr7-5261 chr7 19899476 19899686 + 7.78 0.000 Intergenic Intergenic -125964 NM_001366626 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding chr2-4435 chr2 172146844 172147054 + 7.78 0.000 Intergenic Intergenic 43943 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr1-16481 chr1 228966032 228966242 + 7.78 0.000 Intergenic Intergenic 208664 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr5-4301 chr5 151051840 151052050 + 7.78 0.000 intron (NM_001258454, intron 7 of 17) intron (NM_001258454, intron 7 of 17) 13186 NM_001258455 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr8-6743 chr8 88982331 88982541 + 7.78 0.000 Intergenic MER5B|DNA|hAT-Charlie -654953 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr9-6837 chr9 68730813 68731023 + 7.78 0.000 intron (NM_001278253, intron 1 of 13) intron (NM_001278253, intron 1 of 13) 25504 NM_001278253 8395 Hs.534371 NM_003558 ENSG00000107242 PIP5K1B MSS4|STM7 phosphatidylinositol-4-phosphate 5-kinase type 1 beta protein-coding chr7-3113 chr7 34332001 34332211 + 7.78 0.000 Intergenic Intergenic -326112 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr1-9275 chr1 25513825 25514035 + 7.78 0.000 Intergenic Intergenic -29655 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr22-3833 chr22 31650353 31650563 + 7.78 0.000 intron (NM_001326415, intron 1 of 8) AluSz6|SINE|Alu 11757 NM_001326419 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr13-646 chr13 28532208 28532418 + 7.78 0.000 Intergenic CpG -37185 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr9-4734 chr9 129341282 129341492 + 7.78 0.000 intron (NR_120686, intron 2 of 3) intron (NR_120686, intron 2 of 3) 4464 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr9-7315 chr9 11148747 11148957 + 7.78 0.000 Intergenic L1ME3D|LINE|L1 535646 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr5-5539 chr5 146515649 146515859 + 7.78 0.000 exon (NM_194251, exon 1 of 1) exon (NM_194251, exon 1 of 1) 359 NM_194251 134391 Hs.483732 NM_194251 ENSG00000173250 GPR151 GALR4|GALRL|GPCR|GPCR-2037|PGR7 G protein-coupled receptor 151 protein-coding chr6-3970 chr6 107569843 107570053 + 7.78 0.000 intron (NM_018013, intron 4 of 6) intron (NM_018013, intron 4 of 6) 79831 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr19-3880 chr19 34399030 34399240 + 7.78 0.000 intron (NM_001329911, intron 14 of 17) intron (NM_001329911, intron 14 of 17) -5263 NM_001353433 84306 Hs.515344 NM_032346 ENSG00000126249 PDCD2L - programmed cell death 2 like protein-coding chr14-2761 chr14 103968048 103968258 + 7.78 0.000 intron (NM_153046, intron 5 of 35) intron (NM_153046, intron 5 of 35) -25624 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr3-4441 chr3 29759143 29759353 + 7.78 0.000 intron (NM_001003792, intron 5 of 13) intron (NM_001003792, intron 5 of 13) 174908 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr8-3312 chr8 29887358 29887568 + 7.78 0.000 Intergenic Intergenic -34050 NR_024473 286135 Hs.376840 NR_024473 ENSG00000253279 LINC02209 FAM183CP long intergenic non-protein coding RNA 2209 ncRNA chr2-9449 chr2 234071565 234071775 + 7.78 0.000 intron (NM_006944, intron 7 of 7) L2b|LINE|L2 20968 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr15-891 chr15 99104823 99105033 + 7.78 0.000 promoter-TSS (NM_015286) promoter-TSS (NM_015286) -152 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr10-4053 chr10 31103241 31103451 + 7.78 0.000 Intergenic L2a|LINE|L2 -71409 NM_001143768 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chrX-4960 chrX 113103661 113103871 + 7.78 0.000 intron (NR_110399, intron 2 of 3) intron (NR_110399, intron 2 of 3) 61039 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr1-14847 chr1 76713094 76713304 + 7.78 0.000 Intergenic Kanga1c|DNA|TcMar-Tc2 66068 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chrX-3683 chrX 107278353 107278563 + 7.78 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 71826 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr10-5889 chr10 117714154 117714364 + 7.78 0.000 Intergenic Intergenic -169191 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr6-4028 chr6 125914012 125914222 + 7.78 0.000 intron (NM_001199621, intron 9 of 14) L1ME4c|LINE|L1 -5138 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr2-12074 chr2 32331581 32331791 + 7.78 0.000 Intergenic LTR67B|LTR|ERVL -25342 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr2-9154 chr2 211693892 211694102 + 7.78 0.000 intron (NM_001042599, intron 12 of 26) MLT1C|LTR|ERVL-MaLR 732363 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr11-10555 chr11 121406822 121407032 + 7.78 0.000 Intergenic LTR49-int|LTR|ERV1 -45387 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr6-5618 chr6 46263761 46263971 + 7.78 0.000 intron (NM_001251973, intron 2 of 4) intron (NM_001251973, intron 2 of 4) -12458 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 - uncharacterized LOC101926915 ncRNA chrX-3927 chrX 9707695 9707905 + 7.78 0.000 intron (NM_001139466, intron 13 of 17) intron (NM_001139466, intron 13 of 17) 58047 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr21-839 chr21 45951289 45951499 + 7.78 0.000 Intergenic Intergenic -21576 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr4-6861 chr4 10052504 10052714 + 7.78 0.000 Intergenic L2a|LINE|L2 -12361 NM_001001290 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr4-4196 chr4 12763838 12764048 + 7.78 0.000 Intergenic AluJb|SINE|Alu 540492 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr11-7269 chr11 23377342 23377552 + 7.78 0.000 Intergenic Intergenic 41743 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr7-4883 chr7 115734455 115734665 + 7.78 0.000 Intergenic Intergenic -153119 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr12-7699 chr12 90321349 90321559 + 7.78 0.000 Intergenic LTR49|LTR|ERV1 28136 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr2-10897 chr2 69851599 69851809 + 7.78 0.000 intron (NM_178439, intron 8 of 13) AluJr|SINE|Alu 22044 NM_178439 64395 Hs.293971 NM_178439 ENSG00000087338 GMCL1 BTBD13|GCL|GCL1|SPATA29 germ cell-less 1, spermatogenesis associated protein-coding chr21-1529 chr21 45705508 45705718 + 7.78 0.000 intron (NM_001348238, intron 2 of 16) intron (NM_001348238, intron 2 of 16) 36739 NM_001348242 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr11-7946 chr11 3696846 3697056 + 7.78 0.000 intron (NR_157590, intron 24 of 31) intron (NR_157590, intron 24 of 31) -25567 NM_020402 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr14-3314 chr14 86357289 86357499 + 7.78 0.000 Intergenic MER44B|DNA|TcMar-Tigger 422716 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr1-16228 chr1 209238845 209239055 + 7.78 0.000 Intergenic Intergenic -86506 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr22-3769 chr22 28075274 28075484 + 7.78 0.000 intron (NM_001145418, intron 12 of 22) intron (NM_001145418, intron 12 of 22) -154767 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr21-1268 chr21 24427724 24427934 + 7.78 0.000 promoter-TSS (NR_135521) promoter-TSS (NR_135521) -911 NR_135521 105372751 Hs.652040 NR_135519 ENSG00000237484 LINC01684 lnc-JAM2-6 long intergenic non-protein coding RNA 1684 ncRNA chr5-8220 chr5 108786120 108786330 + 7.78 0.000 intron (NM_001308038, intron 3 of 7) HAL1b|LINE|L1 37277 NR_146155 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr18-2163 chr18 58097396 58097606 + 7.78 0.000 intron (NM_001144964, intron 1 of 30) intron (NM_001144964, intron 1 of 30) 50275 NM_001144964 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr2-7598 chr2 25923092 25923302 + 7.78 0.000 Intergenic Intergenic -44710 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr3-11006 chr3 180030293 180030503 + 7.78 0.000 intron (NM_016559, intron 1 of 14) intron (NM_016559, intron 1 of 14) 6539 NM_001256753 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr13-2014 chr13 38196756 38196966 + 7.78 0.000 Intergenic Intergenic -53629 NR_047500 100874188 Hs.569249 NR_047500 ENSG00000223685 LINC00571 - long intergenic non-protein coding RNA 571 ncRNA chr1-3063 chr1 16049021 16049231 + 7.78 0.000 exon (NM_001165945, exon 1 of 13) exon (NM_001165945, exon 1 of 13) 364 NM_001165945 1188 Hs.352243 NM_000085 ENSG00000184908 CLCNKB CLCKB|ClC-K2|ClC-Kb chloride voltage-gated channel Kb protein-coding chr2-9100 chr2 204888955 204889165 + 7.78 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 343585 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr7-3909 chr7 120502741 120502951 + 7.78 0.000 intron (NM_012281, intron 1 of 5) LTR78|LTR|ERV1 229671 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr1-12635 chr1 40711634 40711844 + 7.78 0.000 intron (NM_001308115, intron 1 of 9) intron (NM_001308115, intron 1 of 9) 2373 NM_001308115 4802 Hs.713051 NM_014223 ENSG00000066136 NFYC CBF-C|CBFC|H1TF2A|HAP5|HSM|NF-YC nuclear transcription factor Y subunit gamma protein-coding chr10-9187 chr10 131780153 131780363 + 7.78 0.000 intron (NR_038365, intron 2 of 4) intron (NR_038365, intron 2 of 4) 9941 NR_038365 399827 Hs.523353 NM_001001677 ENSG00000189275 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA chr4-4412 chr4 45412651 45412861 + 7.78 0.000 Intergenic ERVL-B4-int|LTR|ERVL -686122 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr22-3652 chr22 22248958 22249168 + 7.78 0.000 Intergenic L2c|LINE|L2 4277 NM_007128 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr16-4475 chr16 56655547 56655757 + 7.78 0.000 Intergenic Intergenic -2291 NM_001301272 4494 Hs.513626 NM_005949 ENSG00000198417 MT1F MT1 metallothionein 1F protein-coding chr3-9165 chr3 33716055 33716265 + 7.78 0.000 intron (NM_001365634, intron 1 of 35) L2|LINE|L2 2094 NM_001365632 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr6-6746 chr6 2663197 2663407 + 7.78 0.000 TTS (NM_001347872) TTS (NM_001347872) -28699 NR_131168 154386 Hs.680574 NM_152554 ENSG00000164385 LINC01600 C6orf195|bA145H9.2 long intergenic non-protein coding RNA 1600 ncRNA chr3-10111 chr3 112452102 112452312 + 7.78 0.000 Intergenic Intergenic 47265 NM_181780 151888 Hs.445162 NM_181780 ENSG00000186265 BTLA BTLA1|CD272 B and T lymphocyte associated protein-coding chr22-2927 chr22 47056687 47056897 + 7.78 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -140750 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr22-3442 chr22 40764942 40765152 + 7.78 0.000 Intergenic L2c|LINE|L2 48911 NR_039923 100616283 NR_039923 ENSG00000266594 MIR4766 mir-4766 microRNA 4766 ncRNA chr1-6464 chr1 19635988 19636198 + 7.78 0.000 intron (NM_001204088, intron 2 of 4) intron (NM_001204088, intron 2 of 4) -7136 NM_182744 4681 Hs.654502 NM_005380 ENSG00000158747 NBL1 D1S1733E|DAN|DAND1|NB|NO3 NBL1, DAN family BMP antagonist protein-coding chr15-4247 chr15 33563067 33563277 + 7.78 0.000 intron (NM_001243996, intron 11 of 102) intron (NM_001243996, intron 11 of 102) 252205 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr7-5980 chr7 101795694 101795904 + 7.78 0.000 Intergenic Intergenic -20208 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr5-9071 chr5 171274936 171275146 + 7.78 0.000 intron (NM_022897, intron 25 of 27) intron (NM_022897, intron 25 of 27) -34207 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chrX-2427 chrX 77825293 77825503 + 7.78 0.000 TTS (NM_001367916) TTS (NM_001367916) -39182 NM_138270 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr9-5602 chr9 114928167 114928377 + 7.78 0.000 intron (NM_001252290, intron 1 of 4) intron (NM_001252290, intron 1 of 4) 2323 NM_001252290 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr19-3328 chr19 5897788 5897998 + 7.78 0.000 intron (NM_175614, intron 1 of 3) intron (NM_175614, intron 1 of 3) 5897 NM_175614 126328 Hs.406062 NM_175614 ENSG00000174886 NDUFA11 B14.7|CI-B14.7|MC1DN14 NADH:ubiquinone oxidoreductase subunit A11 protein-coding chr2-11799 chr2 16620808 16621018 + 7.78 0.000 intron (NM_030797, intron 2 of 11) L2c|LINE|L2 44921 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr18-736 chr18 49095483 49095693 + 7.78 0.000 intron (NM_001353210, intron 16 of 16) MamSINE1|SINE|tRNA-RTE -45820 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr8-3813 chr8 28500667 28500877 + 7.78 0.000 intron (NM_017412, intron 2 of 7) AluSx3|SINE|Alu 4410 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr9-4246 chr9 90088471 90088681 + 7.78 0.000 Intergenic Intergenic -47077 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr9-4236 chr9 79902922 79903132 + 7.78 0.000 intron (NR_121213, intron 1 of 2) intron (NR_121213, intron 1 of 2) -71996 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr9-4060 chr9 114246693 114246903 + 7.78 0.000 intron (NM_032888, intron 24 of 60) intron (NM_032888, intron 24 of 60) 37364 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr3-7989 chr3 179924037 179924247 + 7.78 0.000 intron (NM_001349396, intron 1 of 13) intron (NM_001349396, intron 1 of 13) 24605 NR_110061 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr2-7052 chr2 160871924 160872134 + 7.78 0.000 Intergenic L2a|LINE|L2 -264926 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr19-3591 chr19 49064166 49064376 + 7.78 0.000 promoter-TSS (NM_006179) promoter-TSS (NM_006179) -404 NM_006179 4909 Hs.266902 NM_006179 ENSG00000225950 NTF4 GLC10|GLC1O|NT-4|NT-4/5|NT-5|NT4|NT5|NTF5 neurotrophin 4 protein-coding chr3-3459 chr3 160921114 160921324 + 7.78 0.000 intron (NR_134243, intron 2 of 5) intron (NR_134243, intron 2 of 5) 50621 NR_134243 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr5-8563 chr5 136282727 136282937 + 7.78 0.000 intron (NM_001167577, intron 2 of 10) L2b|LINE|L2 19024 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr3-6171 chr3 59608190 59608400 + 7.78 0.000 Intergenic Intergenic 50202 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr9-6908 chr9 91685199 91685409 + 7.78 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR -48959 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr3-4283 chr3 153784558 153784768 + 7.78 0.000 Intergenic MLT2F|LTR|ERVL -22137 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr22-2576 chr22 29028879 29029089 + 7.78 0.000 intron (NR_046851, intron 2 of 2) intron (NR_046851, intron 2 of 2) 2492 NR_046851 100874123 Hs.674708 NR_046851 ENSG00000177993 ZNRF3-AS1 - ZNRF3 antisense RNA 1 ncRNA chr7-5595 chr7 50070256 50070466 + 7.78 0.000 intron (NM_007009, intron 3 of 7) HERV15-int|LTR|ERV1 22885 NM_001159878 11055 Hs.388841 NM_007009 ENSG00000042813 ZPBP ZPBP1 zona pellucida binding protein protein-coding chr20-3543 chr20 1497442 1497652 + 7.78 0.000 Intergenic Alu|SINE|Alu -6127 NM_001134836 284759 Hs.721685 NM_001122962 ENSG00000196209 SIRPB2 PTPN1L|PTPNS1L3|dJ776F14.2 signal regulatory protein beta 2 protein-coding chr2-9777 chr2 109042148 109042358 + 7.78 0.000 Intergenic L1MEg|LINE|L1 -53033 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr8-3873 chr8 37842844 37843054 + 7.78 0.000 TTS (NM_018310) TTS (NM_018310) 6912 NM_018310 55290 Hs.709301 NM_018310 ENSG00000104221 BRF2 BRFU|TFIIIB50 BRF2 RNA polymerase III transcription initiation factor subunit protein-coding chr8-3664 chr8 13924292 13924502 + 7.78 0.000 Intergenic AluSx|SINE|Alu 294707 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr4-5193 chr4 160011958 160012168 + 7.78 0.000 Intergenic L1MA3|LINE|L1 -234279 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr3-7071 chr3 177002414 177002624 + 7.78 0.000 Intergenic L1ME1|LINE|L1 -185518 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr3-6412 chr3 99967943 99968153 + 7.78 0.000 intron (NM_001042459, intron 1 of 4) L2b|LINE|L2 -3650 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr10-5507 chr10 82470547 82470757 + 7.78 0.000 intron (NR_163253, intron 3 of 10) intron (NR_163253, intron 3 of 10) -237732 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr2-3667 chr2 176038598 176038808 + 7.78 0.000 Intergenic L2c|LINE|L2 -35883 NR_130941 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr20-3954 chr20 34155271 34155481 + 7.78 0.000 Intergenic HERV9N-int|LTR|ERV1 -43133 NM_001316363 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr5-4471 chr5 7993291 7993501 + 7.78 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 124248 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr10-6717 chr10 125581970 125582180 + 7.78 0.000 intron (NM_001318133, intron 3 of 3) intron (NM_001318133, intron 3 of 3) 7704 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr15-3288 chr15 77690661 77690871 + 7.78 0.000 5' UTR (NM_001301195, exon 3 of 4) 5' UTR (NM_001301195, exon 3 of 4) 5382 NM_001301200 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr17-6222 chr17 15786501 15786711 + 7.78 0.000 promoter-TSS (NR_002211) promoter-TSS (NR_002211) -244 NR_002211 4213 Hs.356135 NR_002211 MEIS3P1 MEIS3|MEIS4|MRG2 Meis homeobox 3 pseudogene 1 pseudo chr8-6850 chr8 99352945 99353155 + 7.78 0.000 intron (NM_017890, intron 19 of 61) AluSz6|SINE|Alu 183680 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA chr1-15944 chr1 188359134 188359344 + 7.78 0.000 Intergenic MSTA|LTR|ERVL-MaLR 915611 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr4-8023 chr4 118363568 118363778 + 7.78 0.000 Intergenic Intergenic -10670 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr4-3485 chr4 134216498 134216708 + 7.78 0.000 Intergenic Intergenic -14814 NM_001114734 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr11-10241 chr11 100929500 100929710 + 7.78 0.000 intron (NM_001367945, intron 8 of 25) L1MB7|LINE|L1 -4669 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr3-9329 chr3 45607430 45607640 + 7.78 0.000 intron (NM_014240, intron 1 of 7) intron (NM_014240, intron 1 of 7) 12784 NM_014240 8994 Hs.193370 NM_014240 ENSG00000144791 LIMD1 - LIM domains containing 1 protein-coding chr11-8916 chr11 16982850 16983060 + 7.78 0.000 intron (NM_001329630, intron 3 of 26) L2c|LINE|L2 31459 NM_001329630 144100 Hs.12332 NM_175058 ENSG00000166689 PLEKHA7 - pleckstrin homology domain containing A7 protein-coding chr1-12168 chr1 183842592 183842802 + 7.78 0.000 intron (NM_001297671, intron 2 of 17) intron (NM_001297671, intron 2 of 17) 37577 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr18-2482 chr18 48441521 48441731 + 7.78 0.000 Intergenic Intergenic -29041 NM_001371287 chr7-9385 chr7 130952450 130952660 + 7.78 0.000 intron (NR_024153, intron 3 of 4) MIR|SINE|MIR 39091 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr11-2186 chr11 10302720 10302930 + 7.78 0.000 Intergenic CpG -2248 NM_001124 133 Hs.441047 NM_001124 ENSG00000148926 ADM AM|PAMP adrenomedullin protein-coding chr4-8323 chr4 145320562 145320772 + 7.78 0.000 Intergenic Intergenic 19752 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr12-4559 chr12 27867339 27867549 + 7.78 0.000 Intergenic Intergenic 87211 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr5-6458 chr5 170697180 170697390 + 7.78 0.000 intron (NM_001278340, intron 2 of 8) L2b|LINE|L2 -15815 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr3-6128 chr3 54771507 54771717 + 7.78 0.000 intron (NM_018398, intron 13 of 37) MLT1E1A|LTR|ERVL-MaLR 129643 NR_046666 100874237 Hs.570583 NR_046666 ENSG00000243715 CACNA2D3-AS1 - CACNA2D3 antisense RNA 1 ncRNA chr7-5103 chr7 2906753 2906963 + 7.78 0.000 intron (NM_001324281, intron 25 of 25) intron (NM_001324281, intron 25 of 25) -62550 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr14-2935 chr14 44626789 44626999 + 7.78 0.000 Intergenic LTR18B|LTR|ERVL 119485 NR_135257 105370473 Hs.180134 NR_135257 ENSG00000258747 LOC105370473 - uncharacterized LOC105370473 ncRNA chr3-11081 chr3 184943158 184943368 + 7.78 0.000 intron (NM_001009921, intron 35 of 46) intron (NM_001009921, intron 35 of 46) 130756 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr20-879 chr20 19757458 19757668 + 7.78 0.000 Intergenic CpG -128958 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr10-4279 chr10 6739766 6739976 + 7.78 0.000 TTS (NR_138480) TTS (NR_138480) 2489 NR_138480 108570035 Hs.568834 NR_138480 LINP1 - lncRNA in non-homologous end joining pathway 1 ncRNA chr11-7010 chr11 117654321 117654531 + 7.78 0.000 intron (NM_020693, intron 3 of 32) MIR1_Amn|SINE|MIR 142790 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr18-686 chr18 76822038 76822248 + 7.78 0.000 promoter-TSS (NM_001306089) promoter-TSS (NM_001306089) 152 NR_040024 100131655 Hs.385806 NR_040024 ENSG00000264278 ZNF236-DT - ZNF236 divergent transcript ncRNA chr3-8058 chr3 7718622 7718832 + 7.78 0.000 intron (NM_181874, intron 10 of 10) intron (NM_181874, intron 10 of 10) -183443 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr12-7531 chr12 69827262 69827472 + 7.78 0.000 intron (NM_182530, intron 1 of 24) intron (NM_182530, intron 1 of 24) 2140 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr8-3577 chr8 132481544 132481754 + 7.78 0.000 promoter-TSS (NM_004519) promoter-TSS (NM_004519) -554 NM_004519 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr4-5405 chr4 5114136 5114346 + 7.78 0.000 intron (NM_001306082, intron 1 of 12) L2b|LINE|L2 62761 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr13-3102 chr13 53216992 53217202 + 7.78 0.000 Intergenic Intergenic -65197 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr4-7340 chr4 57012655 57012865 + 7.78 0.000 intron (NM_001303269, intron 14 of 25) AluSz6|SINE|Alu 33864 NM_000938 5431 Hs.602757 NM_000938 ENSG00000047315 POLR2B POL2RB|RPB2|hRPB140 RNA polymerase II subunit B protein-coding chr7-3026 chr7 87785345 87785555 + 7.78 0.000 intron (NM_001134406, intron 8 of 9) L1PA16|LINE|L1 -72127 NM_001348945 5243 Hs.489033 NM_000927 ENSG00000085563 ABCB1 ABC20|CD243|CLCS|GP170|MDR1|P-GP|PGY1 ATP binding cassette subfamily B member 1 protein-coding chr22-4033 chr22 41225576 41225786 + 7.78 0.000 intron (NM_031488, intron 11 of 16) intron (NM_031488, intron 11 of 16) -8054 NR_148200 100506544 Hs.627409 NR_148200 ENSG00000235513 LOC100506544 - uncharacterized LOC100506544 ncRNA chr2-12291 chr2 46528969 46529179 + 7.78 0.000 intron (NM_001371282, intron 3 of 4) intron (NM_001371282, intron 3 of 4) -13416 NM_012249 23433 Hs.709193 NM_012249 ENSG00000119729 RHOQ ARHQ|HEL-S-42|RASL7A|TC10|TC10A ras homolog family member Q protein-coding chr5-7557 chr5 39351390 39351600 + 7.78 0.000 intron (NM_001737, intron 1 of 10) MSTA-int|LTR|ERVL-MaLR 13000 NM_001737 735 Hs.654443 NM_001737 ENSG00000113600 C9 ARMD15|C9D complement C9 protein-coding chr3-9501 chr3 50943880 50944090 + 7.78 0.000 intron (NM_004947, intron 5 of 52) intron (NM_004947, intron 5 of 52) 268905 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr3-4385 chr3 193213062 193213272 + 7.78 0.000 Intergenic Intergenic -28055 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr6-4441 chr6 34100820 34101030 + 7.78 0.000 intron (NM_001256809, intron 1 of 8) MLT1I|LTR|ERVL-MaLR 5042 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr17-8355 chr17 74043543 74043753 + 7.78 0.000 Intergenic Intergenic -160030 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chrX-4620 chrX 75963028 75963238 + 7.78 0.000 Intergenic Intergenic -177879 NM_138703 139599 Hs.356869 NM_138703 ENSG00000186675 MAGEE2 HCA3 MAGE family member E2 protein-coding chr9-4145 chr9 136776635 136776845 + 7.78 0.000 Intergenic AluSx3|SINE|Alu -12222 NM_203347 389812 Hs.413902 NM_203347 ENSG00000177984 LCN15 PRO6093|UNQ2541 lipocalin 15 protein-coding chr13-4361 chr13 106043258 106043468 + 7.78 0.000 Intergenic Intergenic -333201 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr3-9303 chr3 43366224 43366434 + 7.78 0.000 TTS (NM_001346468) TTS (NM_001346468) -14367 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chr20-1452 chr20 59007224 59007434 + 7.78 0.000 promoter-TSS (NM_001336) promoter-TSS (NM_001336) -75 NM_001336 1522 Hs.252549 NM_001336 ENSG00000101160 CTSZ CTSX cathepsin Z protein-coding chr9-5266 chr9 79927580 79927790 + 7.78 0.000 intron (NR_121213, intron 1 of 2) AluSx|SINE|Alu -47338 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr1-9247 chr1 24070876 24071086 + 7.78 0.000 intron (NM_152372, intron 25 of 36) intron (NM_152372, intron 25 of 36) 41154 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr3-4158 chr3 124851563 124851773 + 7.78 0.000 intron (NM_001354766, intron 3 of 13) intron (NM_001354766, intron 3 of 13) 35697 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr5-3204 chr5 80995480 80995690 + 7.78 0.000 intron (NM_006909, intron 1 of 26) HAL1ME|LINE|L1 -34678 NR_105015 102524628 Hs.737159 NR_105015 ENSG00000251450 RASGRF2-AS1 - RASGRF2 antisense RNA 1 ncRNA chr6-5492 chr6 163039925 163040135 + 7.78 0.000 intron (NM_001080379, intron 2 of 4) THE1D-int|LTR|ERVL-MaLR 14131 NR_110872 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr3-5247 chr3 106467139 106467349 + 7.78 0.000 Intergenic L1MA2|LINE|L1 -597843 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr7-8392 chr7 45215099 45215309 + 7.78 0.000 Intergenic L1M5|LINE|L1 57413 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr4-3929 chr4 162195587 162195797 + 7.78 0.000 Intergenic L1PB1|LINE|L1 -31658 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr3-9360 chr3 46842859 46843069 + 7.78 0.000 Intergenic L1M4a2|LINE|L1 -8869 NR_160554 339906 Hs.585127 NM_182702 ENSG00000178055 PRSS42P PRSS42|TESSP2 serine protease 42, pseudogene pseudo chr6-4743 chr6 69179851 69180061 + 7.78 0.000 intron (NM_001704, intron 17 of 31) L1PA16|LINE|L1 544674 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr21-1627 chr21 21140917 21141127 + 7.78 0.000 intron (NM_001352595, intron 1 of 14) intron (NM_001352595, intron 1 of 14) -6140 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr12-4064 chr12 52990085 52990295 + 7.78 0.000 Intergenic Intergenic -16266 NM_001330654 1975 Hs.648394 NM_001417 ENSG00000063046 EIF4B EIF-4B|PRO1843 eukaryotic translation initiation factor 4B protein-coding chr8-1798 chr8 100527585 100527795 + 7.78 0.000 intron (NM_001270377, intron 4 of 4) intron (NM_001270377, intron 4 of 4) 32069 NM_001270378 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr1-13316 chr1 239865713 239865923 + 7.78 0.000 intron (NM_001347716, intron 7 of 7) intron (NM_001347716, intron 7 of 7) 34054 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr18-3503 chr18 74035836 74036046 + 7.78 0.000 Intergenic Intergenic 111893 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr1-14690 chr1 62406754 62406964 + 7.78 0.000 Intergenic Intergenic -29445 NM_001017416 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr1-6817 chr1 94330155 94330365 + 7.78 0.000 Intergenic Intergenic -82514 NM_001328665 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr7-8118 chr7 26690361 26690571 + 7.78 0.000 intron (NM_003930, intron 9 of 12) intron (NM_003930, intron 9 of 12) 52595 NR_161201 285941 Hs.413394 NR_161201 C7orf71 - chromosome 7 open reading frame 71 ncRNA chr17-3984 chr17 66676516 66676726 + 7.78 0.000 intron (NM_002737, intron 5 of 16) intron (NM_002737, intron 5 of 16) -110451 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr5-1534 chr5 171336868 171337078 + 7.78 0.000 Intergenic Intergenic 27725 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr5-6367 chr5 139058375 139058585 + 7.78 0.000 intron (NM_022464, intron 3 of 9) L1MC4a|LINE|L1 139888 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr1-8562 chr1 169958140 169958350 + 7.78 0.000 intron (NM_014970, intron 18 of 19) 7SLRNA|srpRNA|srpRNA -64286 NM_181093 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr5-4627 chr5 33509020 33509230 + 7.78 0.000 Intergenic MER92-int|LTR|ERV1 68349 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr15-4950 chr15 78396193 78396403 + 7.78 0.000 Intergenic AluSz|SINE|Alu -41133 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr18-2393 chr18 1017521 1017731 + 7.78 0.000 Intergenic Intergenic -89633 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA chr3-6701 chr3 133105288 133105498 + 7.78 0.000 intron (NM_001136469, intron 2 of 5) MLT1E2|LTR|ERVL-MaLR -19428 NM_001282865 66000 Hs.191616 NM_023943 ENSG00000144868 TMEM108 CT124|RTLN transmembrane protein 108 protein-coding chr2-11250 chr2 172470904 172471114 + 7.78 0.000 exon (NM_001365529, exon 5 of 25) exon (NM_001365529, exon 5 of 25) -4987 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr17-7204 chr17 82576815 82577025 + 7.78 0.000 intron (NM_004514, intron 4 of 8) AluSp|SINE|Alu 57188 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr22-4234 chr22 46891324 46891534 + 7.78 0.000 intron (NM_001284305, intron 6 of 12) intron (NM_001284305, intron 6 of 12) 24613 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr2-7426 chr2 10413994 10414204 + 7.78 0.000 intron (NM_134421, intron 3 of 5) intron (NM_134421, intron 3 of 5) 32750 NR_028374 100302743 Hs.730525 NR_028374 ENSG00000206633 SNORA80B ACA67B small nucleolar RNA, H/ACA box 80B snoRNA chr9-7264 chr9 5578116 5578326 + 7.78 0.000 Intergenic ERVL-E-int|LTR|ERVL -50886 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr1-16534 chr1 232212776 232212986 + 7.78 0.000 Intergenic Intergenic 287047 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr8-5487 chr8 51503086 51503296 + 7.78 0.000 intron (NM_144651, intron 4 of 22) intron (NM_144651, intron 4 of 22) 306254 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chrX-2227 chrX 43967618 43967828 + 7.78 0.000 intron (NR_046631, intron 4 of 5) intron (NR_046631, intron 4 of 5) 5667 NM_000266 4693 Hs.522615 NM_000266 ENSG00000124479 NDP EVR2|FEVR|ND norrin cystine knot growth factor NDP protein-coding chr7-5548 chr7 45690333 45690543 + 7.78 0.000 intron (NM_021116, intron 14 of 19) LTR33|LTR|ERVL 78580 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr4-3846 chr4 126487047 126487257 + 7.78 0.000 Intergenic Intergenic 979893 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr6-3989 chr6 113155178 113155388 + 7.78 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 278164 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr18-3320 chr18 56062772 56062982 + 7.78 0.000 intron (NR_148972, intron 3 of 8) MIRb|SINE|MIR 20599 NR_146510 102724698 NR_146510 ENSG00000267057 LINC01905 - long intergenic non-protein coding RNA 1905 ncRNA chr15-3368 chr15 85045730 85045940 + 7.78 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 63861 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr17-7298 chr17 4110150 4110360 + 7.78 0.000 intron (NM_015113, intron 5 of 54) intron (NM_015113, intron 5 of 54) 32775 NM_015113 23140 Hs.277624 NM_015113 ENSG00000074755 ZZEF1 ZZZ4 zinc finger ZZ-type and EF-hand domain containing 1 protein-coding chr17-3645 chr17 4849218 4849428 + 7.78 0.000 intron (NM_015716, intron 1 of 30) intron (NM_015716, intron 1 of 30) 15983 NM_170663 50488 Hs.443417 NM_015716 ENSG00000141503 MINK1 B55|MAP4K6|MINK|YSK2|ZC3 misshapen like kinase 1 protein-coding chr22-2823 chr22 43310344 43310554 + 7.78 0.000 intron (NM_173050, intron 3 of 21) MLT1G3|LTR|ERVL-MaLR 32923 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr20-1790 chr20 58414246 58414456 + 7.78 0.000 intron (NR_036633, intron 1 of 3) SVA_F|Retroposon|SVA 25122 NM_001195677 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr9-5170 chr9 68420167 68420377 + 7.78 0.000 intron (NM_021965, intron 6 of 10) intron (NM_021965, intron 6 of 10) -62406 NR_015423 572558 Hs.552819 NR_015423 ENSG00000224958 PGM5-AS1 FAM233A PGM5 antisense RNA 1 ncRNA chrX-5389 chrX 151345455 151345665 + 7.78 0.000 Intergenic Intergenic -51035 NM_001363810 203547 Hs.58633 NM_001017980 ENSG00000160131 VMA21 MEAX|XMEA vacuolar ATPase assembly factor VMA21 protein-coding chrX-3944 chrX 10622349 10622559 + 7.78 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) -1869 NM_033289 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr16-5015 chr16 35107702 35107912 + 7.78 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 62584 NR_002837 606551 Hs.646441 NR_002837 UBE2MP1 - ubiquitin conjugating enzyme E2 M pseudogene 1 pseudo chr9-7277 chr9 6732136 6732346 + 7.78 0.000 intron (NM_001146696, intron 1 of 17) AluSc8|SINE|Alu 11378 NM_001146696 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr10-8701 chr10 101797482 101797692 + 7.78 0.000 intron (NM_012215, intron 10 of 15) intron (NM_012215, intron 10 of 15) -14174 NM_006993 10360 Hs.90691 NM_006993 ENSG00000107833 NPM3 PORMIN|TMEM123 nucleophosmin/nucleoplasmin 3 protein-coding chr6-5037 chr6 111691887 111692097 + 7.78 0.000 intron (NM_153047, intron 12 of 13) intron (NM_153047, intron 12 of 13) 67139 NM_153048 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr2-12581 chr2 70345918 70346128 + 7.78 0.000 Intergenic LTR33|LTR|ERVL -43956 NM_001329753 84908 Hs.516077 NM_032822 ENSG00000035141 FAM136A - family with sequence similarity 136 member A protein-coding chr5-5139 chr5 104866199 104866409 + 7.78 0.000 Intergenic HERVL-int|LTR|ERVL -233170 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr12-5542 chr12 132659289 132659499 + 7.78 0.000 exon (NM_006231, exon 26 of 49) exon (NM_006231, exon 26 of 49) 28130 NM_006231 5426 Hs.524871 NM_006231 ENSG00000177084 POLE CRCS12|FILS|IMAGEI|POLE1 DNA polymerase epsilon, catalytic subunit protein-coding chr7-8531 chr7 55224822 55225032 + 7.78 0.000 Intergenic L3|LINE|CR1 30708 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr10-5531 chr10 85229639 85229849 + 7.78 0.000 Intergenic MIR|SINE|MIR -30806 NR_120667 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr9-4238 chr9 82993445 82993655 + 7.78 0.000 intron (NM_152573, intron 14 of 16) intron (NM_152573, intron 14 of 16) 69592 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr6-4012 chr6 121174545 121174755 + 7.78 0.000 intron (NM_001367759, intron 23 of 33) intron (NM_001367759, intron 23 of 33) 159830 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr10-6798 chr10 10032540 10032750 + 7.78 0.000 Intergenic Intergenic -26077 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA chr20-1350 chr20 24445918 24446128 + 7.78 0.000 Intergenic Intergenic -23176 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr19-6887 chr19 45200929 45201139 + 7.78 0.000 Intergenic AluSx1|SINE|Alu 22289 NM_212550 388552 Hs.103902 NM_212550 ENSG00000189114 BLOC1S3 BLOS3|HPS8|RP biogenesis of lysosomal organelles complex 1 subunit 3 protein-coding chrX-2115 chrX 26853929 26854139 + 7.78 0.000 Intergenic LTR33|LTR|ERVL 295697 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr2-11939 chr2 25455823 25456033 + 7.78 0.000 intron (NM_033147, intron 10 of 19) intron (NM_033147, intron 10 of 19) -113338 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr5-4207 chr5 119746083 119746293 + 7.78 0.000 Intergenic Intergenic 116629 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr6-8386 chr6 150126920 150127130 + 7.78 0.000 Intergenic L2a|LINE|L2 -16019 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr3-7184 chr3 188862223 188862433 + 7.78 0.000 intron (NM_001167672, intron 7 of 9) L2c|LINE|L2 85311 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr6-8377 chr6 149709089 149709299 + 7.78 0.000 intron (NM_001350340, intron 1 of 8) MER4D1|LTR|ERV1 7231 NR_073033 9113 Hs.549084 NM_004690 ENSG00000131023 LATS1 WARTS|wts large tumor suppressor kinase 1 protein-coding chr1-13225 chr1 213867159 213867369 + 7.78 0.000 intron (NR_037850, intron 4 of 5) intron (NR_037850, intron 4 of 5) -57485 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr1-10658 chr1 183060299 183060509 + 7.78 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 36984 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr12-7224 chr12 50707551 50707761 + 7.78 0.000 intron (NM_173602, intron 21 of 37) L2a|LINE|L2 -56445 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr5-2911 chr5 132002093 132002303 + 7.78 0.000 intron (NM_001205250, intron 1 of 20) intron (NM_001205250, intron 1 of 20) 9460 NM_001009185 23305 Hs.14945 NM_015256 ENSG00000164398 ACSL6 ACS2|FACL6|LACS 6|LACS2|LACS5 acyl-CoA synthetase long chain family member 6 protein-coding chr7-5557 chr7 46433022 46433232 + 7.78 0.000 Intergenic Intergenic 263995 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr16-4389 chr16 49858382 49858592 + 7.78 0.000 promoter-TSS (NM_001271620) promoter-TSS (NM_001271620) -568 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr11-4483 chr11 109381712 109381922 + 7.78 0.000 Intergenic THE1D|LTR|ERVL-MaLR -40373 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr16-6483 chr16 58348999 58349209 + 7.78 0.000 Intergenic MER20|DNA|hAT-Charlie -43367 NM_022770 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr7-5499 chr7 43558140 43558350 + 7.78 0.000 intron (NM_001287059, intron 27 of 27) intron (NM_001287059, intron 27 of 27) -24863 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr7-9509 chr7 138351494 138351704 + 7.78 0.000 Intergenic AluSz|SINE|Alu -108660 NM_015905 8805 Hs.490287 NM_003852 ENSG00000122779 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding chr9-5503 chr9 104635778 104635988 + 7.78 0.000 Intergenic Intergenic -17679 NM_001001956 286362 Hs.553682 NM_001001956 ENSG00000136839 OR13C9 OR37L|OR9-13 olfactory receptor family 13 subfamily C member 9 protein-coding chr18-3177 chr18 43926408 43926618 + 7.78 0.000 Intergenic Intergenic 605184 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr14-4371 chr14 26411763 26411973 + 7.78 0.000 Intergenic MIR|SINE|MIR 141562 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr16-1369 chr16 26170529 26170739 + 7.78 0.000 Intergenic MSTB|LTR|ERVL-MaLR 145397 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr5-8996 chr5 164596152 164596362 + 7.78 0.000 Intergenic L2c|LINE|L2 125978 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr7-6797 chr7 28030165 28030375 + 7.78 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -150187 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr4-8150 chr4 128606190 128606400 + 7.78 0.000 Intergenic Intergenic 178279 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr14-3681 chr14 100235023 100235233 + 7.78 0.000 Intergenic Intergenic -4016 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr12-3657 chr12 112471315 112471525 + 7.78 0.000 intron (NM_001330437, intron 6 of 15) AluJo|SINE|Alu 52473 NM_080601 5781 Hs.506852 NM_002834 ENSG00000179295 PTPN11 BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase non-receptor type 11 protein-coding chr10-6691 chr10 119161945 119162155 + 7.78 0.000 intron (NM_213649, intron 3 of 13) intron (NM_213649, intron 3 of 13) 3642 NR_110305 119559 Hs.655168 NM_178867 ENSG00000183605 SFXN4 BCRM1|COXPD18|SLC56A4 sideroflexin 4 protein-coding chr3-9736 chr3 68029095 68029305 + 7.78 0.000 intron (NM_001252216, intron 2 of 4) MLT1D|LTR|ERVL-MaLR 24953 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr4-7916 chr4 107343588 107343798 + 7.78 0.000 Intergenic L1MA4|LINE|L1 -307380 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr10-5136 chr10 51390014 51390224 + 7.78 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 90546 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr12-4977 chr12 77341070 77341280 + 7.78 0.000 Intergenic Intergenic -275606 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr19-2445 chr19 52296589 52296799 + 7.78 0.000 promoter-TSS (NM_001297624) promoter-TSS (NM_001297624) -475 NM_144684 147657 Hs.729317 NM_144684 ENSG00000198464 ZNF480 - zinc finger protein 480 protein-coding chr1-9729 chr1 53558917 53559127 + 7.78 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 99623 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr8-2531 chr8 25943477 25943687 + 7.78 0.000 intron (NM_022659, intron 6 of 15) MIRc|SINE|MIR 101831 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr2-7984 chr2 65749913 65750123 + 7.78 0.000 Intergenic MER58A|DNA|hAT-Charlie -317419 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr6-6284 chr6 37071742 37071952 + 7.78 0.000 Intergenic Intergenic 66192 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr18-3440 chr18 65406908 65407118 + 7.78 0.000 Intergenic Intergenic -343239 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr10-1558 chr10 123551890 123552100 + 7.78 0.000 Intergenic MIRb|SINE|MIR -114360 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr6-8030 chr6 119310546 119310756 + 7.78 0.000 intron (NM_005907, intron 2 of 12) intron (NM_005907, intron 2 of 12) 39110 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chr11-9385 chr11 55475308 55475518 + 7.78 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -78856 NM_001001920 81309 NM_001001920 ENSG00000181939 OR4C15 OR11-127|OR11-134 olfactory receptor family 4 subfamily C member 15 protein-coding chr15-5055 chr15 84945225 84945435 + 7.78 0.000 3' UTR (NM_004213, exon 19 of 19) 3' UTR (NM_004213, exon 19 of 19) -35137 NM_001243137 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr2-7122 chr2 185763227 185763437 + 7.78 0.000 intron (NM_173651, intron 12 of 22) intron (NM_173651, intron 12 of 22) -22855 NR_110217 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr6-5390 chr6 152491326 152491536 + 7.78 0.000 intron (NM_182961, intron 11 of 145) HERVH-int|LTR|ERV1 110901 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr7-5523 chr7 44809117 44809327 + 7.78 0.000 Intergenic FRAM|SINE|Alu 12541 NM_001300981 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr1-13110 chr1 190911786 190911996 + 7.78 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 287001 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA chr1-7098 chr1 196897352 196897562 + 7.78 0.000 intron (NM_001201551, intron 1 of 9) LTR1B1|LTR|ERV1 9405 NM_006684 10877 Hs.710100 NM_006684 ENSG00000134365 CFHR4 CFHL4|FHR-4|FHR4 complement factor H related 4 protein-coding chr16-6028 chr16 9259837 9260047 + 7.78 0.000 Intergenic Intergenic -95646 NR_135195 101927009 Hs.537273 NR_135195 ENSG00000261617 LINC02177 - long intergenic non-protein coding RNA 2177 ncRNA chr10-6738 chr10 130374256 130374466 + 7.78 0.000 Intergenic Intergenic 237952 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chrX-1714 chrX 21519247 21519457 + 7.78 0.000 intron (NM_001168648, intron 9 of 20) intron (NM_001168648, intron 9 of 20) 138978 NM_153270 257240 Hs.448572 NM_153270 ENSG00000185915 KLHL34 - kelch like family member 34 protein-coding chr22-3839 chr22 32242362 32242572 + 7.78 0.000 intron (NM_014227, intron 5 of 14) AluSx3|SINE|Alu 12880 NM_014227 6527 Hs.130101 NM_014227 ENSG00000100191 SLC5A4 DJ90G24.4|SAAT1|SGLT3 solute carrier family 5 member 4 protein-coding chr3-9859 chr3 80060751 80060961 + 7.78 0.000 Intergenic Intergenic -292858 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr12-6069 chr12 118052566 118052776 + 7.78 0.000 intron (NM_001278557, intron 1 of 8) intron (NM_001278557, intron 1 of 8) 8540 NM_001278558 55884 Hs.506985 NM_018639 ENSG00000176871 WSB2 SBA2 WD repeat and SOCS box containing 2 protein-coding chr11-10610 chr11 124586324 124586534 + 7.78 0.000 Intergenic Intergenic 16432 NM_001005194 390275 Hs.632104 NM_001005194 ENSG00000196119 OR8A1 OR11-318|OST025 olfactory receptor family 8 subfamily A member 1 protein-coding chr14-3204 chr14 73284084 73284294 + 7.78 0.000 exon (NM_001320114, exon 10 of 12) exon (NM_001320114, exon 10 of 12) -38188 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr10-2024 chr10 71217463 71217673 + 7.78 0.000 non-coding (NR_038453, exon 2 of 2) non-coding (NR_038453, exon 2 of 2) 660 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr6-2800 chr6 149670053 149670263 + 7.78 0.000 intron (NM_001350339, intron 8 of 9) AluSx1|SINE|Alu -21354 NM_001204076 11104 Hs.450175 NM_007044 ENSG00000186625 KATNA1 - katanin catalytic subunit A1 protein-coding chr12-4082 chr12 54659537 54659747 + 7.78 0.000 Intergenic Intergenic -11277 NM_053283 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr10-4416 chr10 62560084 62560294 + 7.78 0.000 intron (NM_199452, intron 1 of 6) Charlie4z|DNA|hAT-Charlie 39741 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr21-1721 chr21 32726915 32727125 + 7.78 0.000 intron (NM_203446, intron 1 of 32) intron (NM_203446, intron 1 of 32) 901 NM_001160306 8867 Hs.473632 NM_003895 ENSG00000159082 SYNJ1 EIEE53|INPP5G|PARK20 synaptojanin 1 protein-coding chr10-4849 chr10 14316649 14316859 + 7.78 0.000 intron (NR_134578, intron 2 of 3) MLT1L|LTR|ERVL-MaLR 14130 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chrX-1824 chrX 101684804 101685014 + 7.78 0.000 Intergenic Intergenic -25059 NM_177949 9823 Hs.48924 NM_014782 ENSG00000184867 ARMCX2 ALEX2|GASP9 armadillo repeat containing X-linked 2 protein-coding chr6-4673 chr6 53065973 53066183 + 7.78 0.000 intron (NM_033480, intron 1 of 12) intron (NM_033480, intron 1 of 12) 674 NM_033480 26268 Hs.216653 NM_012347 ENSG00000112146 FBXO9 FBX9|NY-REN-57|VCIA1|dJ341E18.2 F-box protein 9 protein-coding chr1-11773 chr1 22204587 22204797 + 7.78 0.000 Intergenic Intergenic -61547 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr15-3729 chr15 55187606 55187816 + 7.78 0.000 intron (NM_016304, intron 3 of 5) L1PB3|LINE|L1 9230 NM_016304 51187 Hs.274772 NM_016304 ENSG00000137876 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding chr17-7743 chr17 34226099 34226309 + 7.78 0.000 Intergenic Intergenic -29081 NM_002982 6347 Hs.303649 NM_002982 ENSG00000108691 CCL2 GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF C-C motif chemokine ligand 2 protein-coding chr7-2334 chr7 149459874 149460084 + 7.78 0.000 intron (NM_015694, intron 1 of 5) CpG 1083 NM_015694 27153 Hs.38512 NM_015694 ENSG00000196453 ZNF777 - zinc finger protein 777 protein-coding chr3-11001 chr3 179831588 179831798 + 7.78 0.000 intron (NM_001349408, intron 8 of 14) L2c|LINE|L2 -66501 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr20-4206 chr20 46695937 46696147 + 7.78 0.000 Intergenic Intergenic -6598 NM_033550 112858 Hs.440263 NM_033550 ENSG00000172315 TP53RK BUD32|C20orf64|GAMOS4|Nori-2|Nori-2p|PRPK|dJ101A2 TP53 regulating kinase protein-coding chr7-5325 chr7 26906366 26906576 + 7.78 0.000 Intergenic Intergenic -41881 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr22-2295 chr22 36936846 36937056 + 7.78 0.000 intron (NM_000395, intron 13 of 13) intron (NM_000395, intron 13 of 13) 23323 NM_000395 1439 Hs.592192 NM_000395 ENSG00000100368 CSF2RB CD131|CDw131|IL3RB|IL5RB|SMDP5|betaGMR colony stimulating factor 2 receptor beta common subunit protein-coding chr14-4605 chr14 51984938 51985148 + 7.78 0.000 Intergenic Intergenic -4503 NM_016039 51637 Hs.534457 NM_016039 ENSG00000087302 RTRAF C14orf166|CGI-99|CGI99|CLE|CLE7|LCRP369|RLLM1|hCLE|hCLE1 RNA transcription, translation and transport factor protein-coding chr3-5327 chr3 128840641 128840851 + 7.78 0.000 Intergenic HERVH-int|LTR|ERV1 -6062 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr7-9152 chr7 112019102 112019312 + 7.78 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 187192 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr2-6279 chr2 49620647 49620857 + 7.78 0.000 Intergenic MIRc|SINE|MIR 353451 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr7-3125 chr7 46886729 46886939 + 7.78 0.000 Intergenic Intergenic -189712 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7-5740 chr7 73650932 73651142 + 7.78 0.000 Intergenic MER53|DNA|hAT -16794 NM_001077621 155382 Hs.647037 NM_152560 ENSG00000176428 VPS37D WBSCR24 VPS37D subunit of ESCRT-I protein-coding chr7-6352 chr7 149733827 149734037 + 7.78 0.000 exon (NM_001290187, exon 17 of 17) exon (NM_001290187, exon 17 of 17) 18921 NM_032534 84626 Hs.299560 NM_032534 ENSG00000133619 KRBA1 - KRAB-A domain containing 1 protein-coding chr1-10597 chr1 176660550 176660760 + 7.78 0.000 intron (NM_021936, intron 3 of 4) L3|LINE|CR1 197480 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr17-4023 chr17 75820414 75820624 + 7.78 0.000 intron (NM_001080419, intron 13 of 15) intron (NM_001080419, intron 13 of 15) 24198 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr8-4453 chr8 115274112 115274322 + 7.78 0.000 Intergenic MIRc|SINE|MIR 393796 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr17-6745 chr17 82472850 82473060 + 7.78 0.000 intron (NM_001038618, intron 5 of 10) AluSx|SINE|Alu 14214 NM_012336 26502 Hs.256526 NM_012336 ENSG00000141562 NARF IOP2 nuclear prelamin A recognition factor protein-coding chr1-5937 chr1 24585508 24585718 + 7.78 0.000 intron (NM_001010980, intron 1 of 3) MIR3|SINE|MIR 29526 NM_001010980 400746 Hs.200253 NM_001010980 ENSG00000184454 NCMAP C1orf130|MP11 non-compact myelin associated protein protein-coding chr4-5474 chr4 63689069 63689279 + 7.78 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 720276 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr17-6194 chr17 1502289 1502499 + 7.78 0.000 intron (NM_001135642, intron 9 of 13) intron (NM_001135642, intron 9 of 13) -9708 NM_001080779 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr11-10039 chr11 82885675 82885885 + 7.78 0.000 intron (NM_199418, intron 1 of 9) intron (NM_199418, intron 1 of 9) 14650 NM_005040 5547 Hs.523936 NM_005040 ENSG00000137509 PRCP HUMPCP|PCP prolylcarboxypeptidase protein-coding chr5-7658 chr5 52984525 52984735 + 7.78 0.000 Intergenic MADE1|DNA|TcMar-Mariner -4722 NR_073105 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr4-6292 chr4 82660750 82660960 + 7.78 0.000 3' UTR (NM_024906, exon 4 of 4) 3' UTR (NM_024906, exon 4 of 4) -39418 NR_024088 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr9-8843 chr9 135554297 135554507 + 7.78 0.000 Intergenic L1MB5|LINE|L1 -7354 NM_001018049 5047 Hs.532325 NM_002571 ENSG00000122133 PAEP GD|GdA|GdF|GdS|PAEG|PEP|PP14|ZIF-1 progestagen associated endometrial protein protein-coding chrX-5139 chrX 130287682 130287892 + 7.78 0.000 Intergenic MER51A|LTR|ERV1 -18888 NM_017666 55609 Hs.308418 NM_017666 ENSG00000056277 ZNF280C SUHW3|ZNF633|ZPET zinc finger protein 280C protein-coding chr7-4501 chr7 157039980 157040190 + 7.78 0.000 Intergenic CpG 29228 NR_038835 645249 Hs.224879 NR_038835 ENSG00000243479 MNX1-AS1 CCAT5 MNX1 antisense RNA 1 (head to head) ncRNA chr5-4767 chr5 53891917 53892127 + 7.78 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) 59577 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr7-4499 chr7 155439308 155439518 + 7.78 0.000 Intergenic Intergenic -18716 NM_001427 2020 Hs.134989 NM_001427 ENSG00000164778 EN2 - engrailed homeobox 2 protein-coding chr9-5378 chr9 91802404 91802614 + 7.78 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 147719 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr10-4273 chr10 3783414 3783624 + 7.78 0.000 intron (NR_027653, intron 1 of 3) intron (NR_027653, intron 1 of 3) 1690 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr20-3650 chr20 9738114 9738324 + 7.78 0.000 intron (NM_177990, intron 1 of 9) L1ME1|LINE|L1 100857 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr1-6412 chr1 11893868 11894078 + 7.78 0.000 Intergenic Intergenic -14181 NR_002754 26829 NR_002754 ENSG00000199347 RNU5E-1 RNU5E|U5E RNA, U5E small nuclear 1 snRNA chr3-6914 chr3 157360147 157360357 + 7.78 0.000 intron (NM_024621, intron 9 of 13) intron (NM_024621, intron 9 of 13) -76598 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr11-10145 chr11 90891998 90892208 + 7.78 0.000 intron (NR_104190, intron 6 of 6) intron (NR_104190, intron 6 of 6) -22901 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr10-4086 chr10 54682403 54682613 + 7.78 0.000 intron (NM_001354404, intron 4 of 34) intron (NM_001354404, intron 4 of 34) -74551 NR_031642 100302192 NR_031642 ENSG00000221594 MIR548F1 MIR548F-1|MIRN548F1|hsa-mir-548f-1 microRNA 548f-1 ncRNA chr5-8249 chr5 111383299 111383509 + 7.78 0.000 intron (NM_001744, intron 4 of 10) LTR40c|LTR|ERVL -128822 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr10-3543 chr10 75875171 75875381 + 7.78 0.000 intron (NM_032024, intron 1 of 5) intron (NM_032024, intron 1 of 5) 92515 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr3-6958 chr3 162931882 162932092 + 7.78 0.000 Intergenic LTR40a|LTR|ERVL 371314 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr5-4838 chr5 61816057 61816267 + 7.78 0.000 Intergenic Intergenic -80464 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr17-5553 chr17 44374510 44374720 + 7.78 0.000 intron (NM_000419, intron 28 of 29) intron (NM_000419, intron 28 of 29) -10762 NM_198475 284069 Hs.154001 NM_198475 ENSG00000161682 FAM171A2 - family with sequence similarity 171 member A2 protein-coding chr1-9818 chr1 60169284 60169494 + 7.78 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -95619 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr9-7873 chr9 87206483 87206693 + 7.78 0.000 Intergenic MIRc|SINE|MIR 57944 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr18-2903 chr18 11746314 11746524 + 7.78 0.000 intron (NM_182978, intron 1 of 11) AluJr|SINE|Alu -5053 NM_001142339 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr14-5381 chr14 103929605 103929815 + 7.78 0.000 intron (NM_153046, intron 1 of 35) AluSx|SINE|Alu 1254 NM_153046 122402 Hs.21454 NM_153046 ENSG00000156414 TDRD9 C14orf75|HIG-1|HLS|NET54|SPGF30|SPNE tudor domain containing 9 protein-coding chr4-4959 chr4 129213848 129214058 + 7.78 0.000 Intergenic Intergenic 117801 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr7-6351 chr7 149726825 149727035 + 7.78 0.000 intron (NM_032534, intron 11 of 16) intron (NM_032534, intron 11 of 16) 11919 NM_032534 84626 Hs.299560 NM_032534 ENSG00000133619 KRBA1 - KRAB-A domain containing 1 protein-coding chr7-8038 chr7 20183124 20183334 + 7.78 0.000 intron (NM_182762, intron 1 of 6) MLT1E3|LTR|ERVL-MaLR 34155 NM_182762 346389 Hs.598388 NM_182762 ENSG00000183742 MACC1 7A5|SH3BP4L MET transcriptional regulator MACC1 protein-coding chr1-8984 chr1 10230733 10230943 + 7.78 0.000 promoter-TSS (NM_001365953) promoter-TSS (NM_001365953) 74 NM_001365953 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr17-4212 chr17 34621719 34621929 + 7.78 0.000 intron (NM_001304438, intron 1 of 8) (TG)n|Simple_repeat|Simple_repeat 41075 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr7-8826 chr7 85228819 85229029 + 7.78 0.000 Intergenic Intergenic -106993 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr7-5946 chr7 100353533 100353743 + 7.78 0.000 non-coding (NR_036569, exon 12 of 18) non-coding (NR_036569, exon 12 of 18) 1320 NR_103728 101752334 Hs.521075 NR_103728 PVRIG2P - poliovirus receptor related immunoglobulin domain containing 2, pseudogene pseudo chr5-6872 chr5 122533776 122533986 + 7.78 0.000 Intergenic Intergenic 50719 NR_134281 101927357 Hs.639856 NR_134281 LOC101927357 - uncharacterized LOC101927357 ncRNA chr1-7861 chr1 94553384 94553594 + 7.78 0.000 Intergenic Intergenic 9787 NR_162147 113219466 NR_162147 MIR12133 - microRNA 12133 ncRNA chr3-2427 chr3 9109589 9109799 + 7.78 0.000 intron (NM_014850, intron 2 of 21) L2c|LINE|L2 -82799 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr15-2094 chr15 66594859 66595069 + 7.78 0.000 intron (NR_110372, intron 1 of 4) L2|LINE|L2 12774 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr12-5849 chr12 48241143 48241353 + 7.78 0.000 Intergenic Intergenic -37956 NM_001004134 121275 Hs.446790 NM_001004134 ENSG00000172640 OR10AD1 OR10AD1P|OR12-1 olfactory receptor family 10 subfamily AD member 1 protein-coding chr5-8962 chr5 160539924 160540134 + 7.78 0.000 Intergenic L2|LINE|L2 54677 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr18-3063 chr18 31463872 31464082 + 7.78 0.000 intron (NM_001944, intron 8 of 15) intron (NM_001944, intron 8 of 15) 16236 NM_001944 1830 Hs.1925 NM_001944 ENSG00000134757 DSG3 CDHF6|PVA desmoglein 3 protein-coding chrX-2382 chrX 69605959 69606169 + 7.78 0.000 Intergenic Intergenic -10049 NM_001005609 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chrX-4204 chrX 36584595 36584805 + 7.78 0.000 Intergenic LTR82B|LTR|ERVL -144408 NR_110412 101928627 Hs.590831 NR_110412 ENSG00000226484 LOC101928627 - uncharacterized LOC101928627 ncRNA chr20-2393 chr20 18479941 18480151 + 7.78 0.000 exon (NM_006466, exon 6 of 9) exon (NM_006466, exon 6 of 9) 9431 NR_036160 100422875 NR_036160 ENSG00000265137 MIR3192 mir-3192 microRNA 3192 ncRNA chr6-3915 chr6 73210688 73210898 + 7.78 0.000 Intergenic Intergenic 14703 NM_001126063 100129128 Hs.663639 NM_001126063 ENSG00000256980 KHDC1L - KH domain containing 1 like protein-coding chr7-3128 chr7 49503853 49504063 + 7.78 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -269680 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr10-4341 chr10 29614126 29614336 + 7.78 0.000 intron (NM_001323599, intron 3 of 38) intron (NM_001323599, intron 3 of 38) -11885 NR_030634 100126327 NR_030634 ENSG00000216035 MIR938 MIRN938|hsa-mir-938 microRNA 938 ncRNA chr4-6969 chr4 20745574 20745784 + 7.78 0.000 intron (NM_025221, intron 4 of 7) intron (NM_025221, intron 4 of 7) 45221 NM_001330747 133015 Hs.479298 NM_145048 ENSG00000163138 PACRGL C4orf28 parkin coregulated like protein-coding chr11-3901 chr11 111819842 111820052 + 7.78 0.000 intron (NR_147984, intron 13 of 15) intron (NR_147984, intron 13 of 15) 51334 NM_001352419 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chr11-7508 chr11 5900450 5900660 + 7.78 0.000 promoter-TSS (NM_001005166) promoter-TSS (NM_001005166) -210 NM_001005166 390082 NM_001005166 ENSG00000277932 OR52E5 OR11-56 olfactory receptor family 52 subfamily E member 5 protein-coding chr12-4206 chr12 100508878 100509088 + 7.78 0.000 intron (NM_001206992, intron 1 of 8) MER46C|DNA|TcMar-Tigger 5623 NM_001206992 9971 Hs.282735 NM_005123 ENSG00000012504 NR1H4 BAR|FXR|HRR-1|HRR1|PFIC5|RIP14 nuclear receptor subfamily 1 group H member 4 protein-coding chr12-3144 chr12 43577096 43577306 + 7.78 0.000 Intergenic Intergenic -24998 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr6-4004 chr6 117550836 117551046 + 7.78 0.000 intron (NM_173674, intron 14 of 14) intron (NM_173674, intron 14 of 14) 51570 NM_001017408 57120 Hs.191539 NM_020399 ENSG00000047932 GOPC CAL|FIG|GOPC1|PIST|dJ94G16.2 golgi associated PDZ and coiled-coil motif containing protein-coding chr1-5909 chr1 10933250 10933460 + 7.78 0.000 Intergenic MER30|DNA|hAT-Charlie 33332 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr7-8322 chr7 41977281 41977491 + 7.78 0.000 intron (NM_000168, intron 12 of 14) intron (NM_000168, intron 12 of 14) 259823 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr2-3543 chr2 11899478 11899688 + 7.78 0.000 Intergenic Intergenic -62597 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA chr12-2692 chr12 100151566 100151776 + 7.78 0.000 Intergenic LTR24C|LTR|ERV1 -8797 NM_001006947 23074 Hs.572154 NM_015054 ENSG00000111647 UHRF1BP1L SHIP164 UHRF1 binding protein 1 like protein-coding chr1-15010 chr1 92538975 92539185 + 7.78 0.000 intron (NM_001350198, intron 19 of 19) intron (NM_001350198, intron 19 of 19) -52155 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr1-4625 chr1 159945608 159945818 + 7.78 0.000 promoter-TSS (NM_001135050) promoter-TSS (NM_001135050) -100 NM_020789 57549 Hs.591472 NM_020789 ENSG00000085552 IGSF9 FP18798|IGSF9A|Nrt1 immunoglobulin superfamily member 9 protein-coding chr1-10758 chr1 200415925 200416135 + 7.78 0.000 Intergenic Intergenic -5994 NM_001281294 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr13-4099 chr13 78487878 78488088 + 7.78 0.000 intron (NR_047001, intron 3 of 5) (AT)n|Simple_repeat|Simple_repeat -108139 NR_158457 780529 Hs.587755 NR_158457 LOC780529 - uncharacterized LOC780529 ncRNA chr4-2867 chr4 73726033 73726243 + 7.78 0.000 Intergenic Intergenic -14431 NM_001354840 3576 Hs.624 NM_000584 ENSG00000169429 CXCL8 GCP-1|GCP1|IL8|LECT|LUCT|LYNAP|MDNCF|MONAP|NAF|NAP-1|NAP1 C-X-C motif chemokine ligand 8 protein-coding chr18-1774 chr18 10677184 10677394 + 7.78 0.000 intron (NM_022068, intron 49 of 51) AluSx|SINE|Alu 15356 NR_110777 101927410 Hs.436902 NR_110777 ENSG00000260779 LOC101927410 - uncharacterized LOC101927410 ncRNA chr5-2101 chr5 32142442 32142652 + 7.78 0.000 intron (NM_022130, intron 2 of 3) SVA_D|Retroposon|SVA 31772 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr7-7965 chr7 12532742 12532952 + 7.78 0.000 intron (NR_136263, intron 3 of 3) intron (NR_136263, intron 3 of 3) 28450 NR_136263 102725191 Hs.602382 NR_136261 ENSG00000226690 LOC102725191 - uncharacterized LOC102725191 ncRNA chr4-8147 chr4 128588593 128588803 + 7.78 0.000 Intergenic L1MA9|LINE|L1 160682 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr9-4305 chr9 122036949 122037159 + 7.78 0.000 intron (NM_194252, intron 2 of 3) intron (NM_194252, intron 2 of 3) 56552 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr8-3027 chr8 127846279 127846489 + 7.78 0.000 intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 50422 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr3-6590 chr3 125014936 125015146 + 7.78 0.000 intron (NM_020733, intron 5 of 16) intron (NM_020733, intron 5 of 16) 40956 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr5-6624 chr5 41042094 41042304 + 7.78 0.000 exon (NM_173489, exon 19 of 42) exon (NM_173489, exon 19 of 42) 29143 NM_173489 133558 Hs.97714 NM_173489 ENSG00000171495 MROH2B HEATR7B2|SPIF maestro heat like repeat family member 2B protein-coding chr2-13688 chr2 164482431 164482641 + 7.78 0.000 Intergenic L2c|LINE|L2 85959 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr10-8049 chr10 64324454 64324664 + 7.78 0.000 Intergenic L1MA9|LINE|L1 -500969 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr9-5225 chr9 76287015 76287225 + 7.78 0.000 intron (NM_001190482, intron 24 of 36) intron (NM_001190482, intron 24 of 36) 107306 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr7-6839 chr7 44523041 44523251 + 7.78 0.000 intron (NM_013389, intron 10 of 19) AluSz|SINE|Alu 18184 NM_001300967 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chrX-3464 chrX 28823760 28823970 + 7.78 0.000 intron (NM_014271, intron 2 of 10) MLT1D|LTR|ERVL-MaLR 236419 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr4-8653 chr4 176745789 176745999 + 7.78 0.000 intron (NM_005429, intron 1 of 6) L3|LINE|CR1 47028 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr1-7080 chr1 185847377 185847587 + 7.78 0.000 intron (NM_031935, intron 2 of 106) L2b|LINE|L2 113091 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr3-4010 chr3 61715027 61715237 + 7.78 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 153561 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr12-5206 chr12 105570686 105570896 + 7.78 0.000 Intergenic Intergenic -133412 NR_110108 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr2-10715 chr2 28539856 28540066 + 7.78 0.000 intron (NM_001170585, intron 11 of 56) intron (NM_001170585, intron 11 of 56) -26396 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr11-8976 chr11 21173842 21174052 + 7.78 0.000 intron (NM_201551, intron 13 of 18) MIR|SINE|MIR 504361 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr9-7718 chr9 73219816 73220026 + 7.78 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 68056 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr10-7871 chr10 48360041 48360251 + 7.78 0.000 intron (NM_001323302, intron 3 of 13) AluSz6|SINE|Alu -41466 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr12-4807 chr12 55936163 55936373 + 7.78 0.000 intron (NM_001351037, intron 1 of 23) intron (NM_001351037, intron 1 of 23) 260 NM_001351037 1606 Hs.524488 NM_001345 ENSG00000065357 DGKA DAGK|DAGK1|DGK-alpha diacylglycerol kinase alpha protein-coding chr10-7551 chr10 15518281 15518491 + 7.78 0.000 intron (NM_001291494, intron 28 of 28) intron (NM_001291494, intron 28 of 28) -147097 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr14-3765 chr14 51766917 51767127 + 7.78 0.000 Intergenic Intergenic 49739 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr3-6031 chr3 49630881 49631091 + 7.78 0.000 intron (NM_003458, intron 2 of 11) intron (NM_003458, intron 2 of 11) -43365 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr3-6456 chr3 106060237 106060447 + 7.78 0.000 Intergenic Intergenic -190941 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr8-7507 chr8 143318478 143318688 + 7.78 0.000 intron (NM_052963, intron 8 of 13) (CCTGCA)n|Simple_repeat|Simple_repeat 16297 NM_052963 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr4-8757 chr4 187065428 187065638 + 7.78 0.000 Intergenic L3b|LINE|CR1 -136453 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr2-3561 chr2 27735629 27735839 + 7.78 0.000 intron (NR_160725, intron 2 of 2) CpG 19611 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr1-9577 chr1 43034515 43034725 + 7.78 0.000 Intergenic MIR|SINE|MIR 75571 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr6-3840 chr6 40570494 40570704 + 7.78 0.000 intron (NM_020737, intron 1 of 2) L2b|LINE|L2 16765 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr22-2655 chr22 36039930 36040140 + 7.78 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -11211 NM_001082578 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr4-5715 chr4 39892595 39892805 + 7.78 0.000 intron (NM_001100399, intron 16 of 32) intron (NM_001100399, intron 16 of 32) 85211 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr5-8716 chr5 143235506 143235716 + 7.78 0.000 Intergenic Intergenic 43111 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr19-6344 chr19 11021236 11021446 + 7.78 0.000 intron (NM_001128845, intron 17 of 32) intron (NM_001128845, intron 17 of 32) 37189 NM_001128848 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr5-4949 chr5 76483331 76483541 + 7.78 0.000 intron (NM_006633, intron 2 of 35) intron (NM_006633, intron 2 of 35) -63973 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr3-10689 chr3 151196218 151196428 + 7.78 0.000 intron (NM_053002, intron 14 of 42) intron (NM_053002, intron 14 of 42) 6893 NM_013308 29909 Hs.549152 NM_013308 ENSG00000174946 GPR171 H963 G protein-coupled receptor 171 protein-coding chr10-3116 chr10 33032616 33032826 + 7.78 0.000 Intergenic Intergenic -74491 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr14-1803 chr14 31505570 31505780 + 7.78 0.000 Intergenic Intergenic -17636 NM_001197184 2856 Hs.727479 NM_001197184 ENSG00000214943 GPR33 - G protein-coupled receptor 33 (gene/pseudogene) protein-coding chr16-6158 chr16 23541169 23541379 + 7.78 0.000 intron (NM_001083614, intron 3 of 8) AluSx1|SINE|Alu 16076 NM_001083614 124454 Hs.620541 NM_001083614 ENSG00000103356 EARS2 COXPD12|MSE1|gluRS|mtGlnRS glutamyl-tRNA synthetase 2, mitochondrial protein-coding chr1-13333 chr1 244641086 244641296 + 7.78 0.000 TTS (NM_001242340) TTS (NM_001242340) -11857 NR_123735 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr2-6017 chr2 98026327 98026537 + 7.78 0.000 Intergenic 7SLRNA|srpRNA|srpRNA -30484 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr12-6756 chr12 6818221 6818431 + 7.78 0.000 intron (NM_000616, intron 7 of 9) intron (NM_000616, intron 7 of 9) -3495 NM_019858 27239 Hs.631654 NM_014449 ENSG00000250510 GPR162 A-2|GRCA G protein-coupled receptor 162 protein-coding chr1-7468 chr1 84429873 84430083 + 7.78 0.000 Intergenic Intergenic 21627 NM_058248 58511 Hs.129142 NM_021233 ENSG00000137976 DNASE2B DLAD deoxyribonuclease 2 beta protein-coding chr1-15293 chr1 116654220 116654430 + 7.78 0.000 intron (NM_001007237, intron 2 of 10) intron (NM_001007237, intron 2 of 10) 13408 NM_001007237 3321 Hs.171057 NM_001542 ENSG00000143061 IGSF3 EWI-3|LCDD|V8 immunoglobulin superfamily member 3 protein-coding chr1-6160 chr1 181806755 181806965 + 7.78 0.000 3' UTR (NM_001205294, exon 46 of 46) 3' UTR (NM_001205294, exon 46 of 46) 254852 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr14-3527 chr14 103939154 103939364 + 7.78 0.000 intron (NM_153046, intron 1 of 35) intron (NM_153046, intron 1 of 35) 3270 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr1-12152 chr1 178639333 178639543 + 7.78 0.000 Intergenic L1MB8|LINE|L1 -38311 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chr11-5063 chr11 108182965 108183175 + 7.78 0.000 intron (NM_001321307, intron 10 of 17) AluJo|SINE|Alu 39568 NM_002519 4863 Hs.171061 NM_002519 ENSG00000149308 NPAT E14|E14/NPAT|p220 nuclear protein, coactivator of histone transcription protein-coding chr4-3855 chr4 127997703 127997913 + 7.78 0.000 intron (NM_001039717, intron 4 of 10) (TCT)n|Simple_repeat|Simple_repeat -31845 NM_152778 256471 Hs.480701 NM_152778 ENSG00000164073 MFSD8 CCMD|CLN7 major facilitator superfamily domain containing 8 protein-coding chr4-6489 chr4 152866598 152866808 + 7.78 0.000 intron (NM_014447, intron 3 of 7) SVA_D|Retroposon|SVA -69620 NM_001371116 chr17-6803 chr17 7179561 7179771 + 7.78 0.000 promoter-TSS (NM_001197216) promoter-TSS (NM_001197216) -102 NM_001197216 432 Hs.12056 NM_001671 ENSG00000141505 ASGR1 ASGPR|ASGPR1|CLEC4H1|HL-1 asialoglycoprotein receptor 1 protein-coding chr8-5360 chr8 20516731 20516941 + 7.78 0.000 Intergenic Intergenic 98090 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr4-4655 chr4 82682594 82682804 + 7.78 0.000 intron (NM_001037582, intron 2 of 4) AluJr|SINE|Alu -61262 NR_024088 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr12-6914 chr12 23897850 23898060 + 7.78 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) 51715 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr2-6508 chr2 189487079 189487289 + 7.78 0.000 Intergenic AluJb|SINE|Alu 45710 NM_032168 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr2-8256 chr2 99984820 99985030 + 7.78 0.000 intron (NM_001025108, intron 6 of 23) intron (NM_001025108, intron 6 of 23) 120658 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr22-2030 chr22 39433201 39433411 + 7.78 0.000 intron (NR_040535, intron 2 of 2) AluYm1|SINE|Alu 1146 NR_040535 100506472 Hs.729080 NR_040535 LOC100506472 - uncharacterized LOC100506472 ncRNA chr3-3981 chr3 54094994 54095204 + 7.78 0.000 Intergenic Intergenic -27453 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr13-3010 chr13 113307627 113307837 + 7.78 0.000 intron (NM_005561, intron 2 of 8) intron (NM_005561, intron 2 of 8) 10493 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr1-8403 chr1 81701492 81701702 + 7.78 0.000 intron (NM_001297704, intron 1 of 20) intron (NM_001297704, intron 1 of 20) 1827 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr8-3990 chr8 53460399 53460609 + 7.78 0.000 Intergenic HERV9-int|LTR|ERV1 63461 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr2-10826 chr2 54417746 54417956 + 7.78 0.000 Intergenic Intergenic -38476 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr13-3096 chr13 51925192 51925402 + 7.78 0.000 Intergenic Intergenic 63328 NM_001346075 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr18-664 chr18 49161850 49162060 + 7.78 0.000 intron (NM_001353210, intron 14 of 16) intron (NM_001353210, intron 14 of 16) -112187 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr2-14085 chr2 199439141 199439351 + 7.78 0.000 intron (NM_001172509, intron 2 of 10) intron (NM_001172509, intron 2 of 10) 18693 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr5-8417 chr5 127563975 127564185 + 7.78 0.000 Intergenic Intergenic 46440 NM_130809 133619 Hs.483259 NM_130809 ENSG00000164244 PRRC1 - proline rich coiled-coil 1 protein-coding chr14-2635 chr14 65790286 65790496 + 7.78 0.000 Intergenic Intergenic 319289 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr2-7481 chr2 16905200 16905410 + 7.78 0.000 Intergenic L1PA5|LINE|L1 -239471 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr14-4454 chr14 33802745 33802955 + 7.78 0.000 3' UTR (NM_173159, exon 12 of 12) 3' UTR (NM_173159, exon 12 of 12) 93913 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr12-7683 chr12 88434265 88434475 + 7.78 0.000 Intergenic ORSL|DNA|hAT-Tip100 146101 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr7-4945 chr7 138087169 138087379 + 7.78 0.000 intron (NM_001190907, intron 1 of 7) MLT1A1|LTR|ERVL-MaLR 10815 NM_001190907 6718 Hs.201667 NM_005989 ENSG00000122787 AKR1D1 3o5bred|CBAS2|SRD5B1 aldo-keto reductase family 1 member D1 protein-coding chr7-6298 chr7 139537635 139537845 + 7.78 0.000 intron (NM_001080511, intron 2 of 4) MER34A|LTR|ERV1 14055 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr7-9261 chr7 123887583 123887793 + 7.78 0.000 Intergenic MER61C|LTR|ERV1 -37553 NM_003117 6677 Hs.121494 NM_003117 ENSG00000106304 SPAM1 HEL-S-96n|HYA1|HYAL1|HYAL3|HYAL5|PH-20|PH20|SPAG15 sperm adhesion molecule 1 protein-coding chr1-6355 chr1 7586777 7586987 + 7.78 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -82848 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr8-6598 chr8 73234572 73234782 + 7.78 0.000 Intergenic LTR79|LTR|ERVL 24825 NM_001243237 100130301 Hs.202296 NM_001243237 ENSG00000274443 C8orf89 - chromosome 8 open reading frame 89 protein-coding chr15-1709 chr15 77559088 77559298 + 7.78 0.000 Intergenic SATR1|Satellite|Satellite 33598 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr10-5611 chr10 93954685 93954895 + 7.78 0.000 Intergenic Tigger3|DNA|TcMar-Tigger 7125 NR_002319 266971 Hs.149255 NR_002319 ENSG00000180764 PIPSL PIP5K1L1|PIP5K1P3|PSMD4P2|bA429H9.1 PIP5K1A and PSMD4 like (pseudogene) pseudo chr3-6630 chr3 127276025 127276235 + 7.78 0.000 Intergenic MER52-int|LTR|ERV1 11916 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr13-3437 chr13 103212770 103212980 + 7.78 0.000 Intergenic Intergenic -146458 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr1-8334 chr1 53725105 53725315 + 7.78 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 8994 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr4-6046 chr4 3711367 3711577 + 7.78 0.000 Intergenic Intergenic -33617 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr3-7981 chr3 177564306 177564516 + 7.78 0.000 intron (NR_047568, intron 2 of 3) AluSz|SINE|Alu 122490 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr8-5811 chr8 2871793 2872003 + 7.78 0.000 Intergenic L1ME3|LINE|L1 -143447 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr6-3198 chr6 131460025 131460235 + 7.78 0.000 Intergenic Intergenic -113096 NM_001244438 383 Hs.440934 NM_000045 ENSG00000118520 ARG1 - arginase 1 protein-coding chr12-7237 chr12 51463596 51463806 + 7.78 0.000 exon (NM_001267615, exon 11 of 15) exon (NM_001267615, exon 11 of 15) 38584 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr8-4305 chr8 97955709 97955919 + 7.78 0.000 intron (NM_002380, intron 4 of 18) L2a|LINE|L2 86403 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr7-6548 chr7 47888469 47888679 + 7.78 0.000 intron (NM_138295, intron 16 of 56) intron (NM_138295, intron 16 of 56) 59917 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chrX-5247 chrX 137434106 137434316 + 7.78 0.000 Intergenic L1PA7|LINE|L1 -131916 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr2-2558 chr2 218648635 218648845 + 7.78 0.000 exon (NM_001366291, exon 5 of 9) exon (NM_001366291, exon 5 of 9) 10883 NM_001105537 7701 Hs.657969 NM_001105537 ENSG00000115568 ZNF142 HA4654|NEDISHM|pHZ-49 zinc finger protein 142 protein-coding chr7-5824 chr7 83869218 83869428 + 7.78 0.000 Intergenic Intergenic -220184 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr17-2689 chr17 50102242 50102452 + 7.78 0.000 intron (NM_002611, intron 2 of 10) intron (NM_002611, intron 2 of 10) 6652 NM_001199899 5164 Hs.256667 NM_002611 ENSG00000005882 PDK2 PDHK2|PDKII pyruvate dehydrogenase kinase 2 protein-coding chr9-7592 chr9 36609870 36610080 + 7.78 0.000 intron (NM_001256691, intron 6 of 15) L2c|LINE|L2 37080 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr4-4510 chr4 61997964 61998174 + 7.78 0.000 intron (NM_001371343, intron 19 of 23) intron (NM_001371343, intron 19 of 23) 163696 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr12-5807 chr12 24045759 24045969 + 7.78 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -94832 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr12-3828 chr12 81354386 81354596 + 7.78 0.000 intron (NM_001282536, intron 13 of 29) Tigger1|DNA|TcMar-Tigger 14878 NM_001220479 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr22-2041 chr22 42298992 42299202 + 7.78 0.000 Intergenic Intergenic -15170 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr11-4765 chr11 117799369 117799579 + 7.78 0.000 intron (NM_001367905, intron 1 of 6) intron (NM_001367905, intron 1 of 6) -2258 NM_001367904 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr2-12515 chr2 64618345 64618555 + 7.78 0.000 Intergenic Intergenic 11138 NR_034023 339807 Hs.434736 NR_034023 ENSG00000233694 LINC02579 - long intergenic non-protein coding RNA 2579 ncRNA chrX-2490 chrX 88603397 88603607 + 7.78 0.000 Intergenic L1PBa|LINE|L1 -143723 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr2-13173 chr2 120397141 120397351 + 7.78 0.000 Intergenic Intergenic 51110 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr4-5970 chr4 173948269 173948479 + 7.78 0.000 Intergenic Intergenic 51101 NR_146487 101928478 NR_146487 ENSG00000250708 LINC02269 - long intergenic non-protein coding RNA 2269 ncRNA chr16-4728 chr16 84047321 84047531 + 7.78 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -5269 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr10-5308 chr10 70446430 70446640 + 7.78 0.000 intron (NM_001329906, intron 1 of 2) (CATT)n|Simple_repeat|Simple_repeat 1413 NM_001329906 4838 Hs.370414 NM_018055 ENSG00000156574 NODAL HTX5 nodal growth differentiation factor protein-coding chr21-1342 chr21 32113031 32113241 + 7.78 0.000 Intergenic Intergenic -26841 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr1-8448 chr1 105059207 105059417 + 7.78 0.000 Intergenic Intergenic 559623 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr3-5801 chr3 28233719 28233929 + 7.78 0.000 Intergenic Intergenic -7795 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr7-4578 chr7 9513535 9513745 + 7.78 0.000 Intergenic L1MC1|LINE|L1 -120630 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr3-2103 chr3 45178267 45178477 + 7.78 0.000 Intergenic Intergenic -31950 NM_178181 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr5-4048 chr5 42529858 42530068 + 7.78 0.000 intron (NM_001242400, intron 2 of 10) intron (NM_001242400, intron 2 of 10) -18080 NM_001242402 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr6-4653 chr6 50002313 50002523 + 7.78 0.000 Intergenic MER67D|LTR|ERV1 19563 NM_001037728 245913 Hs.571093 NM_001037497 ENSG00000203970 DEFB110 DEFB-10|DEFB-11|DEFB111 defensin beta 110 protein-coding chr11-10089 chr11 85844257 85844467 + 7.78 0.000 Intergenic Intergenic -10739 NM_001286159 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr1-14665 chr1 60022067 60022277 + 7.78 0.000 intron (NM_152377, intron 8 of 11) L2a|LINE|L2 51598 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr2-10348 chr2 163456884 163457094 + 7.78 0.000 Intergenic Intergenic 279019 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr21-1309 chr21 45349713 45349923 + 7.78 0.000 Intergenic Intergenic -7828 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chr10-3127 chr10 44390921 44391131 + 7.78 0.000 Intergenic Intergenic -5929 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr13-4253 chr13 97163937 97164147 + 7.78 0.000 Intergenic AluJb|SINE|Alu 15580 NR_125725 103625683 Hs.679591 NR_125725 ENSG00000233124 LINC00456 - long intergenic non-protein coding RNA 456 ncRNA chr5-7900 chr5 75894789 75894999 + 7.78 0.000 Intergenic L1M4|LINE|L1 -177457 NM_001099271 134359 Hs.432726 NM_152408 ENSG00000152359 POC5 C5orf37 POC5 centriolar protein protein-coding chr18-1954 chr18 37152875 37153085 + 7.78 0.000 intron (NR_136303, intron 8 of 13) LTR9D|LTR|ERV1 -121480 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr10-8151 chr10 70832441 70832651 + 7.78 0.000 intron (NM_003901, intron 2 of 14) intron (NM_003901, intron 2 of 14) 16598 NM_003901 8879 Hs.499984 NM_003901 ENSG00000166224 SGPL1 NPHS14|S1PL|SPL sphingosine-1-phosphate lyase 1 protein-coding chr1-10267 chr1 144002547 144002757 + 7.78 0.000 intron (NR_120535, intron 2 of 7) intron (NR_120535, intron 2 of 7) -29133 NM_001346067 554282 NM_001287385 ENSG00000263513 FAM72C - family with sequence similarity 72 member C protein-coding chrX-3214 chrX 51903137 51903347 + 7.78 0.000 TTS (NM_001005332) TTS (NM_001005332) 9619 NM_006986 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr3-8624 chr3 170007073 170007283 + 7.78 0.000 Intergenic L2|LINE|L2 -30817 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr12-5108 chr12 96370693 96370903 + 7.78 0.000 intron (NM_002595, intron 1 of 16) Charlie1b|DNA|hAT-Charlie 29641 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr11-7456 chr11 124408659 124408869 + 7.78 0.000 Intergenic MER66A|LTR|ERV1 -11413 NM_001005467 390271 Hs.690456 NM_001005467 ENSG00000284609 OR8B3 OR11-311 olfactory receptor family 8 subfamily B member 3 protein-coding chr15-5294 chr15 101213974 101214184 + 7.78 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 37969 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr12-5309 chr12 111911194 111911404 + 7.78 0.000 Intergenic L1MA2|LINE|L1 12236 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo chr5-7992 chr5 84771475 84771685 + 7.78 0.000 Intergenic L1M4|LINE|L1 -386700 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr8-3205 chr8 122180986 122181196 + 7.78 0.000 Intergenic Intergenic 387553 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr3-1524 chr3 165863340 165863550 + 7.78 0.000 Intergenic Intergenic -26022 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr22-1068 chr22 20268338 20268548 + 7.78 0.000 promoter-TSS (NM_023004) promoter-TSS (NM_023004) -125 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chr9-8112 chr9 99269333 99269543 + 7.78 0.000 Intergenic Intergenic 47156 NM_006808 10952 Hs.191887 NM_006808 ENSG00000106803 SEC61B - SEC61 translocon beta subunit protein-coding chr4-4152 chr4 8041473 8041683 + 7.78 0.000 intron (NM_001130084, intron 9 of 19) intron (NM_001130084, intron 9 of 19) 30410 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr16-3876 chr16 70789370 70789580 + 7.78 0.000 intron (NM_018052, intron 1 of 18) intron (NM_018052, intron 1 of 18) 11683 NM_001351157 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|TAX1BP2|TRX VAC14 component of PIKFYVE complex protein-coding chr10-8892 chr10 114115352 114115562 + 7.78 0.000 Intergenic Intergenic 58722 NR_031747 100302224 NR_031747 ENSG00000284442 MIR2110 hsa-mir-2110|mir-2110 microRNA 2110 ncRNA chr14-1966 chr14 36636194 36636404 + 7.78 0.000 Intergenic AluJb|SINE|Alu -21269 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr9-7024 chr9 119915723 119915933 + 7.78 0.000 Intergenic L2a|LINE|L2 -19232 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr6-6790 chr6 4467242 4467452 + 7.78 0.000 Intergenic Intergenic -21451 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr3-8967 chr3 15470109 15470319 + 7.78 0.000 intron (NM_080539, intron 10 of 15) intron (NM_080539, intron 10 of 15) 26094 NR_036232 100422868 NR_036232 ENSG00000263573 MIR4270 - microRNA 4270 ncRNA chr17-7721 chr17 33169979 33170189 + 7.78 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 122904 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr5-4709 chr5 40963481 40963691 + 7.78 0.000 intron (NM_000587, intron 13 of 17) intron (NM_000587, intron 13 of 17) 54089 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 - complement C7 protein-coding chr15-5159 chr15 92037787 92037997 + 7.78 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 183588 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr11-3569 chr11 47165265 47165475 + 7.78 0.000 TTS (NM_001003678) TTS (NM_001003678) 11509 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chrX-3441 chrX 21474386 21474596 + 7.78 0.000 intron (NM_001168648, intron 5 of 20) LTR16E2|LTR|ERVL 100073 NM_001330771 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr17-5801 chr17 63964250 63964460 + 7.78 0.000 intron (NM_000334, intron 9 of 23) intron (NM_000334, intron 9 of 23) 8563 NM_000334 6329 Hs.46038 NM_000334 ENSG00000007314 SCN4A CMS16|HOKPP2|HYKPP|HYPP|NAC1A|Na(V)1.4|Nav1.4|SkM1 sodium voltage-gated channel alpha subunit 4 protein-coding chr19-4565 chr19 10744203 10744413 + 7.78 0.000 intron (NM_001005362, intron 1 of 19) intron (NM_001005362, intron 1 of 19) 25904 NR_030368 693223 NR_030368 ENSG00000207972 MIR638 MIRN638|hsa-mir-638 microRNA 638 ncRNA chr6-8006 chr6 117007149 117007359 + 7.78 0.000 Intergenic HAL1|LINE|L1 130012 NM_173560 222546 Hs.352276 NM_173560 ENSG00000185002 RFX6 MTCHRS|MTFS|RFXDC1|dJ955L16.1 regulatory factor X6 protein-coding chr15-2516 chr15 39878273 39878483 + 7.78 0.000 intron (NM_001271854, intron 1 of 3) L1MA9|LINE|L1 42514 NM_007223 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr1-9450 chr1 34735154 34735364 + 7.78 0.000 Intergenic MIRb|SINE|MIR -19788 NM_005268 2709 Hs.198249 NM_005268 ENSG00000189280 GJB5 CX31.1 gap junction protein beta 5 protein-coding chr2-2652 chr2 186473205 186473415 + 7.78 0.000 Intergenic SVA_D|Retroposon|SVA -12950 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding chr13-2191 chr13 20495713 20495923 + 7.78 0.000 intron (NM_001363647, intron 2 of 6) L1MB2|LINE|L1 30039 NM_015974 51084 Hs.370703 NM_015974 ENSG00000165475 CRYL1 GDH|HEL30|gul3DH|lambda-CRY crystallin lambda 1 protein-coding chr20-3179 chr20 44735009 44735219 + 7.78 0.000 intron (NR_132377, intron 3 of 4) MER41A|LTR|ERV1 -10751 NM_022358 60598 Hs.528664 NM_022358 ENSG00000124249 KCNK15 K2p15.1|KCNK11|KCNK14|KT3.3|TASK-5|TASK5|dJ781B1.1 potassium two pore domain channel subfamily K member 15 protein-coding chr2-7495 chr2 18311704 18311914 + 7.78 0.000 Intergenic Intergenic 248844 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr10-6092 chr10 132140747 132140957 + 7.78 0.000 intron (NM_001323086, intron 10 of 23) intron (NM_001323086, intron 10 of 23) -46096 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr9-6385 chr9 31071940 31072150 + 7.78 0.000 Intergenic MER52C|LTR|ERV1 309445 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr2-3986 chr2 83360388 83360598 + 7.78 0.000 Intergenic AluY|SINE|Alu -162321 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr9-5393 chr9 92976376 92976586 + 7.78 0.000 exon (NM_033086, exon 3 of 18) exon (NM_033086, exon 3 of 18) 2012 NM_001369952 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr16-1943 chr16 4915235 4915445 + 7.78 0.000 intron (NM_002705, intron 1 of 21) MIRb|SINE|MIR 21808 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr6-3140 chr6 109381643 109381853 + 7.78 0.000 promoter-TSS (NM_001346500) promoter-TSS (NM_001346500) -9 NM_001346500 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr6-2833 chr6 165818106 165818316 + 7.78 0.000 Intergenic (CCATCT)n|Simple_repeat|Simple_repeat -155931 NM_006661 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr5-4875 chr5 66317057 66317267 + 7.78 0.000 Intergenic L1PA16|LINE|L1 -107716 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA chr3-3792 chr3 14297986 14298196 + 7.78 0.000 Intergenic Intergenic 54477 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA chr20-3484 chr20 58994573 58994783 + 7.78 0.000 TTS (NM_001336) TTS (NM_001336) 12576 NM_001336 1522 Hs.252549 NM_001336 ENSG00000101160 CTSZ CTSX cathepsin Z protein-coding chr2-11163 chr2 148666746 148666956 + 7.78 0.000 intron (NM_015630, intron 1 of 13) intron (NM_015630, intron 1 of 13) 22100 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr20-4363 chr20 56309982 56310192 + 7.78 0.000 Intergenic MIR1_Amn|SINE|MIR -48887 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding chr7-4192 chr7 130242641 130242851 + 7.78 0.000 Intergenic Intergenic -24117 NM_001869 1358 Hs.490038 NM_001869 ENSG00000158516 CPA2 - carboxypeptidase A2 protein-coding chr6-5282 chr6 139172374 139172584 + 7.78 0.000 intron (NM_016217, intron 2 of 3) intron (NM_016217, intron 2 of 3) 37399 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding chr8-4415 chr8 107302418 107302628 + 7.78 0.000 intron (NM_001199859, intron 5 of 8) intron (NM_001199859, intron 5 of 8) 33992 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr8-4611 chr8 131461426 131461636 + 7.78 0.000 Intergenic ERVL-E-int|LTR|ERVL -420622 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr4-8231 chr4 138707857 138708067 + 7.78 0.000 Intergenic Intergenic 304684 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr5-8465 chr5 132001267 132001477 + 7.78 0.000 intron (NM_001205250, intron 1 of 20) intron (NM_001205250, intron 1 of 20) 10286 NM_001009185 23305 Hs.14945 NM_015256 ENSG00000164398 ACSL6 ACS2|FACL6|LACS 6|LACS2|LACS5 acyl-CoA synthetase long chain family member 6 protein-coding chr2-6497 chr2 177983267 177983477 + 7.78 0.000 intron (NM_001077197, intron 3 of 20) intron (NM_001077197, intron 3 of 20) -60535 NM_001077358 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr22-2270 chr22 31681322 31681532 + 7.78 0.000 TTS (NM_173566) TTS (NM_173566) -18863 NM_001326411 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr11-7181 chr11 130269616 130269826 + 7.78 0.000 intron (NR_163265, intron 1 of 7) MIRb|SINE|MIR 44991 NM_014155 29068 Hs.721470 NM_014155 ENSG00000196323 ZBTB44 BTBD15|HSPC063|ZNF851 zinc finger and BTB domain containing 44 protein-coding chr21-934 chr21 39597447 39597657 + 7.78 0.000 non-coding (NR_026542, exon 3 of 3) non-coding (NR_026542, exon 3 of 3) 15270 NR_026543 114041 Hs.375120 NM_153754 ENSG00000184809 B3GALT5-AS1 C21orf88 B3GALT5 antisense RNA 1 ncRNA chr7-9596 chr7 148579050 148579260 + 7.78 0.000 Intergenic HERVL-int|LTR|ERVL -11611 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr11-7116 chr11 123737852 123738062 + 7.78 0.000 intron (NM_001301780, intron 1 of 6) intron (NM_001301780, intron 1 of 6) 3703 NM_003455 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding chr9-4625 chr9 110626038 110626248 + 7.78 0.000 Intergenic Intergenic -42648 NM_001166281 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr2-9915 chr2 234286306 234286516 + 7.78 0.000 Intergenic Intergenic 168184 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr3-7927 chr3 146625286 146625496 + 7.78 0.000 Intergenic Intergenic -19175 NM_001085420 389158 Hs.254692 NM_001085420 ENSG00000231213 PLSCR5 - phospholipid scramblase family member 5 protein-coding chr7-4724 chr7 52072899 52073109 + 7.78 0.000 Intergenic Intergenic -679748 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr1-7219 chr1 223081374 223081584 + 7.78 0.000 Intergenic CpG 61769 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr11-6578 chr11 72257655 72257865 + 7.78 0.000 Intergenic ERVL-E-int|LTR|ERVL -13584 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr5-8957 chr5 160068959 160069169 + 7.78 0.000 Intergenic AluJb|SINE|Alu 50386 NR_146217 114825 Hs.744960 NM_052927 ENSG00000170234 PWWP2A MST101 PWWP domain containing 2A protein-coding chr6-6379 chr6 74227646 74227856 + 7.78 0.000 intron (NR_110856, intron 1 of 3) AluSz6|SINE|Alu 158300 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr9-5074 chr9 33968196 33968406 + 7.78 0.000 intron (NR_163243, intron 5 of 24) intron (NR_163243, intron 5 of 24) -15447 NR_003685 100113379 NR_003685 ENSG00000238886 SNORD121A - small nucleolar RNA, C/D box 121A snoRNA chr13-3340 chr13 71159776 71159986 + 7.78 0.000 intron (NR_047699, intron 2 of 3) intron (NR_047699, intron 2 of 3) 144740 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr6-7993 chr6 115940672 115940882 + 7.78 0.000 3' UTR (NM_002031, exon 8 of 8) 3' UTR (NM_002031, exon 8 of 8) -97954 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo chr5-6256 chr5 95753014 95753224 + 7.78 0.000 intron (NM_014899, intron 5 of 11) AluYf1|SINE|Alu -21017 NM_001349303 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr6-4068 chr6 138405189 138405399 + 7.78 0.000 intron (NM_014320, intron 2 of 3) intron (NM_014320, intron 2 of 3) 1071 NM_014320 23593 Hs.486589 NM_014320 ENSG00000051620 HEBP2 C6ORF34B|C6orf34|PP23|SOUL heme binding protein 2 protein-coding chr2-8446 chr2 121019095 121019305 + 7.78 0.000 Intergenic Intergenic 226919 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr5-4487 chr5 9644700 9644910 + 7.78 0.000 intron (NR_027112, intron 11 of 12) intron (NR_027112, intron 11 of 12) -14454 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr1-11843 chr1 35170157 35170367 + 7.78 0.000 Intergenic Intergenic 22883 NR_136702 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr12-7825 chr12 100250659 100250869 + 7.78 0.000 intron (NM_001319311, intron 8 of 10) intron (NM_001319311, intron 8 of 10) 16315 NM_001319311 120863 Hs.653118 NM_152317 ENSG00000166153 DEPDC4 DEP.4 DEP domain containing 4 protein-coding chr15-2887 chr15 42179734 42179944 + 7.78 0.000 intron (NM_015289, intron 8 of 24) MSTD|LTR|ERVL-MaLR 19827 NR_030357 693212 NR_030357 ENSG00000207712 MIR627 MIRN627|hsa-mir-627|mir-627 microRNA 627 ncRNA KI270749.1-1 KI270749.1 76090 76300 + 7.78 0.000 NA NA NA NA chr1-10368 chr1 155079818 155080028 + 7.78 0.000 intron (NM_004952, intron 1 of 4) CpG 1086 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr19-6007 chr19 1521942 1522152 + 7.78 0.000 Intergenic MIRb|SINE|MIR -2030 NM_001243079 126520 Hs.195352 NM_001011716 ENSG00000185988 PLK5 PLK-5|PLK5P|SgK384ps polo like kinase 5 protein-coding chr7-5808 chr7 81960996 81961206 + 7.78 0.000 intron (NM_000722, intron 36 of 38) intron (NM_000722, intron 36 of 38) -48076 NR_110077 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr2-4592 chr2 106764147 106764357 + 7.78 0.000 Intergenic AluY|SINE|Alu 121776 NR_136313 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr4-4494 chr4 57934149 57934359 + 7.78 0.000 Intergenic Intergenic 508382 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr13-2460 chr13 49838164 49838374 + 7.78 0.000 Intergenic AluSc8|SINE|Alu -45587 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr6-4760 chr6 72083586 72083796 + 7.78 0.000 intron (NM_001350411, intron 2 of 3) MIRb|SINE|MIR -129202 NM_001350441 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr3-8400 chr3 101607681 101607891 + 7.78 0.000 Intergenic L1M4b|LINE|L1 33606 NM_020357 57092 Hs.732633 NM_020357 ENSG00000081154 PCNP - PEST proteolytic signal containing nuclear protein protein-coding chr6-2841 chr6 692463 692673 + 7.78 0.000 intron (NR_073064, intron 1 of 29) CpG 571 NM_018303 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr19-3192 chr19 47173972 47174182 + 7.78 0.000 intron (NM_001145713, intron 6 of 6) AluY|SINE|Alu 43242 NM_005500 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr2-14407 chr2 221150161 221150371 + 7.78 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 422038 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-8189 chr3 40612339 40612549 + 7.78 0.000 Intergenic Intergenic 87484 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr7-5463 chr7 40866715 40866925 + 7.78 0.000 Intergenic Intergenic 113119 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr14-4069 chr14 61703455 61703665 + 7.78 0.000 intron (NM_001243084, intron 1 of 14) intron (NM_001243084, intron 1 of 14) 5938 NM_001243084 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr14-4244 chr14 101505496 101505706 + 7.78 0.000 Intergenic Intergenic 54821 NR_152590 64150 Hs.525597 NR_002770 ENSG00000258498 DIO3OS C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041 DIO3 opposite strand upstream RNA ncRNA chr12-2753 chr12 45771361 45771571 + 7.78 0.000 intron (NM_152641, intron 3 of 20) AluJr|SINE|Alu 41757 NM_001347839 196528 Hs.317304 NM_152641 ENSG00000189079 ARID2 BAF200|CSS6|p200 AT-rich interaction domain 2 protein-coding chr3-6070 chr3 51705870 51706080 + 7.78 0.000 Intergenic Intergenic -1093 NM_001349117 2912 Hs.121510 NM_000839 ENSG00000164082 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate metabotropic receptor 2 protein-coding chr6-8264 chr6 138827336 138827546 + 7.78 0.000 intron (NM_001077706, intron 4 of 21) L1MC5|LINE|L1 31330 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr9-4700 chr9 126024962 126025172 + 7.78 0.000 Intergenic Intergenic 250848 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr11-8037 chr11 18949665 18949875 + 7.78 0.000 Intergenic L1MD2|LINE|L1 -14768 NM_147199 259249 Hs.711459 NM_147199 ENSG00000170255 MRGPRX1 GPCR|MGRG2|MRGX1|SNSR4 MAS related GPR family member X1 protein-coding chr5-4398 chr5 178112123 178112333 + 7.78 0.000 Intergenic L1MB5|LINE|L1 -1304 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr19-2744 chr19 39385196 39385406 + 7.78 0.000 TTS (NM_001303614) TTS (NM_001303614) 5805 NM_019088 54623 Hs.466714 NM_019088 ENSG00000006712 PAF1 F23149_1|PD2 PAF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr3-5444 chr3 177881358 177881568 + 7.78 0.000 intron (NR_110826, intron 1 of 2) intron (NR_110826, intron 1 of 2) 64598 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr8-1762 chr8 47223595 47223805 + 7.78 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 34393 NR_037168 100287846 Hs.21550 NR_037168 LOC100287846 - uncharacterized LOC100287846 ncRNA chr15-3062 chr15 61394149 61394359 + 7.78 0.000 Intergenic Intergenic -164952 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr20-1929 chr20 13412772 13412982 + 7.78 0.000 intron (NM_017714, intron 13 of 13) intron (NM_017714, intron 13 of 13) -173190 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr8-5155 chr8 81549685 81549895 + 7.78 0.000 Intergenic Intergenic -18400 NR_144370 646486 Hs.586370 NM_001105281 ENSG00000197416 FABP12 - fatty acid binding protein 12 protein-coding chr3-8188 chr3 40464904 40465114 + 7.78 0.000 3' UTR (NM_001034996, exon 6 of 6) 3' UTR (NM_001034996, exon 6 of 6) 7670 NM_003973 9045 Hs.446522 NM_003973 ENSG00000188846 RPL14 CAG-ISL-7|CTG-B33|L14|RL14|hRL14 ribosomal protein L14 protein-coding chr9-3671 chr9 97766034 97766244 + 7.78 0.000 intron (NR_147055, intron 5 of 10) intron (NR_147055, intron 5 of 10) -68730 NM_000380 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr11-4854 chr11 27429843 27430053 + 7.78 0.000 intron (NM_018490, intron 1 of 17) intron (NM_018490, intron 1 of 17) -41783 NR_131169 105376671 Hs.568999 NR_131169 ENSG00000254862 LOC105376671 lnc-BBOX1-1 uncharacterized LOC105376671 ncRNA chr3-5343 chr3 135638141 135638351 + 7.78 0.000 Intergenic Intergenic -327482 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr15-3740 chr15 58951827 58952037 + 7.78 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -18253 NM_024755 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr14-2102 chr14 73253198 73253408 + 7.78 0.000 intron (NM_001365907, intron 10 of 25) intron (NM_001365907, intron 10 of 25) -7302 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr3-6208 chr3 63504813 63505023 + 7.78 0.000 intron (NM_001130003, intron 3 of 5) Tigger16a|DNA|TcMar-Tigger 45133 NR_046677 100874016 Hs.441275 NR_046677 ENSG00000241359 SYNPR-AS1 - SYNPR antisense RNA 1 ncRNA chr6-5717 chr6 139587742 139587952 + 7.78 0.000 Intergenic Intergenic -113251 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr10-7196 chr10 111393150 111393360 + 7.78 0.000 Intergenic Intergenic 278964 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr13-2707 chr13 93066213 93066423 + 7.78 0.000 Intergenic LTR26|LTR|ERV1 20977 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA chr7-4292 chr7 22296457 22296667 + 7.78 0.000 intron (NM_012294, intron 5 of 25) MER74A|LTR|ERVL 60592 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr9-5851 chr9 130383452 130383662 + 7.78 0.000 exon (NM_001291815, exon 57 of 98) exon (NM_001291815, exon 57 of 98) -61150 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr17-2547 chr17 41637022 41637232 + 7.78 0.000 intron (NR_033415, intron 2 of 10) intron (NR_033415, intron 2 of 10) 3072 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo chr20-1390 chr20 3451916 3452126 + 7.78 0.000 Intergenic AluJb|SINE|Alu -18997 NM_001207047 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr1-10849 chr1 204565918 204566128 + 7.78 0.000 Intergenic Intergenic 49617 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr4-2970 chr4 113411642 113411852 + 7.78 0.000 Intergenic L2c|LINE|L2 118908 NM_001354279 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr5-5824 chr5 177545490 177545700 + 7.78 0.000 intron (NM_001190946, intron 1 of 8) AluSx3|SINE|Alu 8500 NM_001366499 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr7-4186 chr7 128000937 128001147 + 7.78 0.000 TTS (NR_027330) TTS (NR_027330) 3533 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr11-10305 chr11 107733419 107733629 + 7.78 0.000 Intergenic L1PA16|LINE|L1 -21468 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr17-5282 chr17 20982535 20982745 + 7.78 0.000 TTS (NR_123730) TTS (NR_123730) 44074 NR_160718 339260 Hs.661076 NR_123730 ENSG00000233098 LOC339260 - uncharacterized LOC339260 ncRNA chr20-3171 chr20 42687535 42687745 + 7.78 0.000 non-coding (NR_110004, exon 4 of 4) non-coding (NR_110004, exon 4 of 4) 2157 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr1-13956 chr1 24485654 24485864 + 7.78 0.000 Intergenic Intergenic -16585 NM_001251979 11123 Hs.656799 NM_013441 ENSG00000117602 RCAN3 DSCR1L2|MCIP3|RCN3|hRCN3 RCAN family member 3 protein-coding chr1-8674 chr1 212170262 212170472 + 7.78 0.000 Intergenic MSTC|LTR|ERVL-MaLR 64369 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr11-9806 chr11 70533948 70534158 + 7.78 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) -97041 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA chr3-7391 chr3 86228514 86228724 + 7.78 0.000 Intergenic Intergenic -253324 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr6-6293 chr6 40211282 40211492 + 7.78 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 144619 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr7-8883 chr7 91565027 91565237 + 7.78 0.000 Intergenic Charlie4a|DNA|hAT-Charlie 300699 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr17-1339 chr17 39461909 39462119 + 7.78 0.000 5' UTR (NM_016507, exon 1 of 14) 5' UTR (NM_016507, exon 1 of 14) 528 NM_015083 51755 Hs.345028 NM_015083 ENSG00000167258 CDK12 CRK7|CRKR|CRKRS cyclin dependent kinase 12 protein-coding chr10-6443 chr10 26884136 26884346 + 7.78 0.000 Intergenic Intergenic -23154 NM_001178120 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr1-7938 chr1 173405911 173406121 + 7.78 0.000 intron (NR_037845, intron 2 of 2) intron (NR_037845, intron 2 of 2) 55346 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr3-5355 chr3 140378758 140378968 + 7.78 0.000 intron (NM_022131, intron 2 of 16) MIRb|SINE|MIR 129926 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr16-5594 chr16 52188721 52188931 + 7.78 0.000 Intergenic Intergenic -69738 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA chr1-10791 chr1 201778689 201778899 + 7.78 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) -29817 NR_031599 100302158 NR_031599 ENSG00000221028 MIR1231 MIRN1231|hsa-mir-1231 microRNA 1231 ncRNA chr17-3458 chr17 39596709 39596919 + 7.78 0.000 Intergenic CpG 11106 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr14-4536 chr14 41419018 41419228 + 7.78 0.000 Intergenic Tigger12|DNA|TcMar-Tigger -187733 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr6-5476 chr6 161279744 161279954 + 7.78 0.000 Intergenic MIRc|SINE|MIR -5788 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr13-3867 chr13 51101776 51101986 + 7.78 0.000 intron (NR_102432, intron 1 of 3) L2c|LINE|L2 9347 NM_001351589 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr7-5005 chr7 613826 614036 + 7.78 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 10533 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr3-3909 chr3 47342206 47342416 + 7.78 0.000 intron (NM_025010, intron 8 of 9) intron (NM_025010, intron 8 of 9) -38710 NM_015466 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr9-6179 chr9 85427543 85427753 + 7.78 0.000 Intergenic Intergenic 314381 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr12-5195 chr12 105093838 105094048 + 7.78 0.000 Intergenic L1ME1|LINE|L1 -9485 NM_001034173 160428 Hs.42572 NM_001034173 ENSG00000136010 ALDH1L2 mtFDH aldehyde dehydrogenase 1 family member L2 protein-coding chr12-5437 chr12 122894358 122894568 + 7.78 0.000 intron (NM_024667, intron 1 of 3) intron (NM_024667, intron 1 of 3) 1661 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr3-5528 chr3 443695 443905 + 7.78 0.000 Intergenic HERVL-int|LTR|ERVL -58005 NR_110739 101927193 Hs.677744 NR_110739 ENSG00000234661 CHL1-AS1 - CHL1 antisense RNA 1 ncRNA chr5-7872 chr5 73177706 73177916 + 7.78 0.000 Intergenic Intergenic 4618 NM_153217 134288 Hs.508588 NM_153217 ENSG00000164325 TMEM174 - transmembrane protein 174 protein-coding chr8-3467 chr8 96927778 96927988 + 7.78 0.000 intron (NM_016134, intron 4 of 7) intron (NM_016134, intron 4 of 7) 282641 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr1-6430 chr1 15848443 15848653 + 7.78 0.000 promoter-TSS (NR_024279) promoter-TSS (NR_024279) -401 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr5-5289 chr5 124475508 124475718 + 7.78 0.000 Intergenic Intergenic -37093 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr10-7149 chr10 101550978 101551188 + 7.78 0.000 intron (NM_001256856, intron 13 of 13) intron (NM_001256856, intron 13 of 13) 37174 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr1-14449 chr1 46431413 46431623 + 7.78 0.000 Intergenic Intergenic -2309 NR_045483 729041 Hs.170205 NR_045483 FAAHP1 FAAH-OUT|FAAHOUT|LINC00505 fatty acid amide hydrolase pseudogene 1 pseudo chr7-6349 chr7 149535070 149535280 + 7.78 0.000 Intergenic MER61F|LTR|ERV1 -37366 NM_152557 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr19-6479 chr19 17532207 17532417 + 7.78 0.000 exon (NM_001321827, exon 3 of 15) exon (NM_001321827, exon 3 of 15) 5043 NM_001321828 199786 Hs.434133 NM_173544 ENSG00000167483 NIBAN3 BCNP1|FAM129C niban apoptosis regulator 3 protein-coding chr15-4809 chr15 72860499 72860709 + 7.78 0.000 Intergenic MER47C|DNA|TcMar-Tigger -76846 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr3-5348 chr3 136609792 136610002 + 7.78 0.000 intron (NM_005862, intron 3 of 33) intron (NM_005862, intron 3 of 33) 142481 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr1-8217 chr1 25727324 25727534 + 7.78 0.000 intron (NM_020379, intron 2 of 11) intron (NM_020379, intron 2 of 11) -72764 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr14-2733 chr14 98470911 98471121 + 7.78 0.000 Intergenic LTR16A|LTR|ERVL -240597 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr3-11116 chr3 186259674 186259884 + 7.78 0.000 intron (NM_001080744, intron 15 of 23) intron (NM_001080744, intron 15 of 23) 102455 NM_001346 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr20-3464 chr20 55239532 55239742 + 7.78 0.000 Intergenic (TTTTAT)n|Simple_repeat|Simple_repeat -183406 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA chr6-8098 chr6 126188454 126188664 + 7.78 0.000 Intergenic Intergenic -151230 NM_001012507 387103 Hs.486401 NM_001012507 ENSG00000203760 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding chr9-8411 chr9 120285209 120285419 + 7.78 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -40264 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr15-1447 chr15 78113360 78113570 + 7.78 0.000 intron (NM_001271888, intron 1 of 4) MamRep564|Unknown|Unknown 17980 NM_001301224 10518 Hs.129867 NM_006383 ENSG00000136425 CIB2 DFNB48|KIP2|USH1J calcium and integrin binding family member 2 protein-coding chr14-2585 chr14 50044513 50044723 + 7.78 0.000 intron (NR_131171, intron 4 of 8) intron (NR_131171, intron 4 of 8) -37098 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr2-13119 chr2 114551479 114551689 + 7.78 0.000 intron (NM_001321908, intron 2 of 25) intron (NM_001321908, intron 2 of 25) 90007 NM_001321908 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr14-4022 chr14 47535899 47536109 + 7.78 0.000 intron (NM_001113498, intron 1 of 16) MLT1H|LTR|ERVL-MaLR 138950 NM_001113498 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr11-6634 chr11 74648529 74648739 + 7.78 0.000 Intergenic L2c|LINE|L2 56052 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr11-6766 chr11 85647274 85647484 + 7.78 0.000 promoter-TSS (NM_032273) promoter-TSS (NM_032273) -540 NM_001244735 84233 Hs.533725 NM_032273 ENSG00000171202 TMEM126A OPA7 transmembrane protein 126A protein-coding chr12-2959 chr12 106840307 106840517 + 7.78 0.000 intron (NR_147137, intron 4 of 10) intron (NR_147137, intron 4 of 10) -65581 NR_040246 100287944 Hs.742087 NR_040246 ENSG00000257545 LOC100287944 - uncharacterized LOC100287944 ncRNA chr12-7003 chr12 31457166 31457376 + 7.78 0.000 intron (NM_144973, intron 4 of 20) intron (NM_144973, intron 4 of 20) -87970 NR_146469 101929027 Hs.266041 NR_146469 ENSG00000256232 LINC02387 - long intergenic non-protein coding RNA 2387 ncRNA chr17-7303 chr17 4420728 4420938 + 7.78 0.000 Intergenic Intergenic -13107 NM_001320449 201305 Hs.657543 NM_182538 ENSG00000182557 SPNS3 SLC62A3 sphingolipid transporter 3 (putative) protein-coding chr6-4784 chr6 75956873 75957083 + 7.78 0.000 intron (NM_001563, intron 12 of 16) AluSg7|SINE|Alu 115684 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr14-4500 chr14 37649374 37649584 + 7.78 0.000 intron (NM_001310135, intron 3 of 32) intron (NM_001310135, intron 3 of 32) 53850 NM_001310135 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr7-4630 chr7 28615226 28615436 + 7.78 0.000 intron (NM_182899, intron 4 of 9) intron (NM_182899, intron 4 of 9) -70802 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chrX-2786 chrX 132126695 132126905 + 7.78 0.000 intron (NM_194277, intron 1 of 11) intron (NM_194277, intron 1 of 11) 1220 NM_001306193 90167 Hs.170776 NM_194277 ENSG00000165694 FRMD7 NYS|NYS1|XIPAN FERM domain containing 7 protein-coding chr3-8211 chr3 46542681 46542891 + 7.78 0.000 intron (NM_024512, intron 3 of 8) intron (NM_024512, intron 3 of 8) -14612 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr15-2544 chr15 44642825 44643035 + 7.78 0.000 intron (NM_025137, intron 7 of 39) L1ME3D|LINE|L1 20732 NM_001160227 80208 Hs.656271 NM_025137 ENSG00000104133 SPG11 ALS5|CMT2X|KIAA1840 SPG11 vesicle trafficking associated, spatacsin protein-coding chr14-4749 chr14 61902861 61903071 + 7.78 0.000 intron (NM_001367661, intron 2 of 8) THE1B|LTR|ERVL-MaLR -24729 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr15-3925 chr15 37646871 37647081 + 7.78 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -287631 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr1-8583 chr1 179094509 179094719 + 7.78 0.000 intron (NM_022371, intron 5 of 5) AluJb|SINE|Alu 12544 NM_022371 64222 Hs.584957 NM_022371 ENSG00000186283 TOR3A ADIR|ADIR2 torsin family 3 member A protein-coding chr7-8568 chr7 63207765 63207975 + 7.78 0.000 Intergenic L2a|LINE|L2 96186 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr12-3490 chr12 123180250 123180460 + 7.78 0.000 intron (NR_103517, intron 14 of 23) intron (NR_103517, intron 14 of 23) 52786 NM_022782 10198 Hs.577404 NM_022782 ENSG00000051825 MPHOSPH9 MPP-9|MPP9 M-phase phosphoprotein 9 protein-coding chr2-11039 chr2 110797852 110798062 + 7.78 0.000 intron (NM_001371254, intron 5 of 18) intron (NM_001371254, intron 5 of 18) 65384 NM_001371254 chr4-8768 chr4 187808180 187808390 + 7.78 0.000 Intergenic Intergenic -135644 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LINC02492 - long intergenic non-protein coding RNA 2492 ncRNA chr5-3579 chr5 78799450 78799660 + 7.78 0.000 intron (NM_000046, intron 6 of 7) intron (NM_000046, intron 6 of 7) -150783 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr14-2154 chr14 89029798 89030008 + 7.78 0.000 Intergenic Intergenic 205252 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr3-9432 chr3 48892192 48892402 + 7.78 0.000 intron (NM_000387, intron 1 of 8) L1MB7|LINE|L1 6585 NM_000387 788 Hs.13845 NM_000387 ENSG00000178537 SLC25A20 CAC|CACT solute carrier family 25 member 20 protein-coding chr17-8381 chr17 74918468 74918678 + 7.78 0.000 intron (NM_173477, intron 2 of 2) AluSz|SINE|Alu 4682 NM_001282489 124590 Hs.376688 NM_173477 ENSG00000182040 USH1G ANKS4A|SANS USH1 protein network component sans protein-coding chr7-8291 chr7 39321295 39321505 + 7.78 0.000 intron (NM_001370959, intron 4 of 9) intron (NM_001370959, intron 4 of 9) 7734 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr1-15843 chr1 180901390 180901600 + 7.78 0.000 Intergenic Intergenic -11402 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding KI270438.1-10 KI270438.1 14110 14320 + 7.78 0.000 NA NA NA NA chr8-4292 chr8 96765037 96765247 + 7.78 0.000 intron (NM_016134, intron 1 of 7) intron (NM_016134, intron 1 of 7) 119900 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr4-6844 chr4 8669611 8669821 + 7.78 0.000 Intergenic L1MEd|LINE|L1 76951 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr11-5078 chr11 113884547 113884757 + 7.78 0.000 Intergenic MER57B2|LTR|ERV1 -9080 NM_001346258 57646 Hs.503891 NM_020886 ENSG00000048028 USP28 - ubiquitin specific peptidase 28 protein-coding chr8-3636 chr8 708842 709052 + 7.78 0.000 intron (NR_156467, intron 2 of 5) AluJb|SINE|Alu 22277 NM_207332 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chr9-8706 chr9 131261625 131261835 + 7.78 0.000 intron (NM_033387, intron 1 of 1) intron (NM_033387, intron 1 of 1) 14780 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr2-13066 chr2 110125962 110126172 + 7.78 0.000 intron (NM_207181, intron 18 of 19) intron (NM_207181, intron 18 of 19) -9501 NM_005434 7851 Hs.185055 NM_005434 ENSG00000144063 MALL BENE mal, T cell differentiation protein like protein-coding chr12-5874 chr12 51883410 51883620 + 7.78 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -4588 NM_001304459 341405 Hs.433492 NM_182608 ENSG00000167612 ANKRD33 C12orf7|PANKY ankyrin repeat domain 33 protein-coding chr10-9162 chr10 129171025 129171235 + 7.78 0.000 Intergenic L1ME4b|LINE|L1 258297 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr11-7956 chr11 6289308 6289518 + 7.78 0.000 Intergenic Intergenic 29575 NM_001318029 887 Hs.203 NM_176875 ENSG00000110148 CCKBR CCK-B|CCK2R|GASR cholecystokinin B receptor protein-coding chr2-8309 chr2 105606704 105606914 + 7.78 0.000 intron (NR_038891, intron 1 of 3) L1ME3Cz|LINE|L1 3750 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chr11-4429 chr11 94044168 94044378 + 7.78 0.000 intron (NM_001098672, intron 1 of 19) intron (NM_001098672, intron 1 of 19) 22919 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chrX-3202 chrX 47016159 47016369 + 7.78 0.000 intron (NM_001077445, intron 4 of 10) MLT1J2|LTR|ERVL-MaLR -62091 NM_004683 9104 Hs.77854 NM_004683 ENSG00000130988 RGN GNL|HEL-S-41|RC|SMP30 regucalcin protein-coding chr12-7920 chr12 108511968 108512178 + 7.78 0.000 Intergenic Intergenic -3204 NM_007076 11153 Hs.661891 NM_007076 ENSG00000198855 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding chr3-8536 chr3 142965698 142965908 + 7.78 0.000 intron (NR_125393, intron 2 of 4) intron (NR_125393, intron 2 of 4) 1745 NR_125393 101927832 Hs.710007 NR_125393 ENSG00000241570 PAQR9-AS1 - PAQR9 antisense RNA 1 ncRNA chr11-9050 chr11 28014333 28014543 + 7.78 0.000 Intergenic Intergenic -42377 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr14-4674 chr14 55893914 55894124 + 7.78 0.000 Intergenic Intergenic -97345 NR_026796 645687 Hs.569345 NR_026796 ENSG00000258791 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA chr9-7728 chr9 73920205 73920415 + 7.78 0.000 Intergenic Intergenic -451221 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr10-6741 chr10 131878114 131878324 + 7.78 0.000 Intergenic L1MC|LINE|L1 -22789 NM_018461 55844 Hs.380372 NM_018461 ENSG00000175470 PPP2R2D B55D|B55delta|MDS026 protein phosphatase 2 regulatory subunit Bdelta protein-coding chr22-2359 chr22 43761137 43761347 + 7.78 0.000 intron (NM_198856, intron 3 of 29) MSTD|LTR|ERVL-MaLR 51063 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr3-4624 chr3 14841395 14841605 + 7.78 0.000 intron (NM_152536, intron 1 of 19) intron (NM_152536, intron 1 of 19) 22538 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr3-6479 chr3 110208235 110208445 + 7.78 0.000 Intergenic Intergenic 605512 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr10-8887 chr10 113744624 113744834 + 7.78 0.000 Intergenic LTR33|LTR|ERVL -6953 NM_001193435 79949 Hs.228320 NM_024889 ENSG00000148735 PLEKHS1 C10orf81|HEL185 pleckstrin homology domain containing S1 protein-coding chr22-1627 chr22 32082174 32082384 + 7.78 0.000 intron (NM_000343, intron 6 of 14) intron (NM_000343, intron 6 of 14) 23109 NM_001256314 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr17-7333 chr17 5804246 5804456 + 7.78 0.000 intron (NR_040000, intron 1 of 3) MLT1C|LTR|ERVL-MaLR 32117 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr12-6671 chr12 3012765 3012975 + 7.78 0.000 intron (NM_201441, intron 5 of 11) intron (NM_201441, intron 5 of 11) 52935 NM_201443 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr3-8114 chr3 19167882 19168092 + 7.78 0.000 intron (NM_144633, intron 1 of 15) L1MD2|LINE|L1 19477 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr6-2226 chr6 44161756 44161966 + 7.78 0.000 intron (NM_007058, intron 1 of 22) intron (NM_007058, intron 1 of 22) 3041 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr11-6802 chr11 91751521 91751731 + 7.78 0.000 Intergenic MSTA|LTR|ERVL-MaLR -473408 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr1-16544 chr1 233341241 233341451 + 7.78 0.000 intron (NM_032435, intron 1 of 9) intron (NM_032435, intron 1 of 9) 13622 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr8-2111 chr8 142353214 142353424 + 7.78 0.000 intron (NM_001366903, intron 2 of 9) L2c|LINE|L2 49863 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr8-3210 chr8 124491237 124491447 + 7.78 0.000 intron (NM_001146160, intron 9 of 9) L2a|LINE|L2 16575 NM_007218 11236 Hs.744151 NM_007218 ENSG00000170881 RNF139 HRCA1|RCA1|TRC8 ring finger protein 139 protein-coding chrX-745 chrX 13937932 13938142 + 7.78 0.000 intron (NM_001318729, intron 1 of 6) intron (NM_001318729, intron 1 of 6) 601 NM_001001994 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr16-5905 chr16 2656841 2657051 + 7.78 0.000 Intergenic Intergenic 16493 NR_040023 100507321 Hs.406976 NM_001012731 ERVK13-1 - endogenous retrovirus group K13 member 1 ncRNA chr1-10767 chr1 200951195 200951405 + 7.78 0.000 intron (NR_147176, intron 8 of 15) intron (NR_147176, intron 8 of 15) 22356 NR_147176 647215 Hs.576504 NR_147176 ENSG00000233217 MROH3P C1orf81 maestro heat like repeat family member 3, pseudogene pseudo chr5-6687 chr5 63025616 63025826 + 7.78 0.000 Intergenic Intergenic 446902 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr13-3796 chr13 45456669 45456879 + 7.78 0.000 Intergenic LTR33|LTR|ERVL -8165 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chr7-4664 chr7 35278810 35279020 + 7.78 0.000 Intergenic LTR82B|LTR|ERVL -24815 NM_001077653 57057 Hs.404167 NM_020417 ENSG00000164532 TBX20 ASD4 T-box transcription factor 20 protein-coding chr6-4383 chr6 22958898 22959108 + 7.78 0.000 Intergenic L2c|LINE|L2 -241079 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr10-5962 chr10 123346474 123346684 + 7.78 0.000 Intergenic Intergenic 192177 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr15-4394 chr15 43135978 43136188 + 7.78 0.000 intron (NM_001347033, intron 3 of 11) L1ME1|LINE|L1 2497 NM_024956 80021 Hs.511175 NM_024956 ENSG00000137842 TMEM62 - transmembrane protein 62 protein-coding chr18-837 chr18 13136753 13136963 + 7.78 0.000 Intergenic CpG -81902 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr12-6565 chr12 120855971 120856181 + 7.78 0.000 intron (NM_139015, intron 1 of 10) MER3|DNA|hAT-Charlie 48282 NM_139015 121665 Hs.507087 NM_139015 ENSG00000157837 SPPL3 IMP2|MDHV1887|PRO4332|PSH1|PSL4 signal peptide peptidase like 3 protein-coding chr20-3683 chr20 13676614 13676824 + 7.78 0.000 Intergenic MER103C|DNA|hAT-Charlie -37783 NR_136631 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr11-8898 chr11 15841154 15841364 + 7.78 0.000 Intergenic Intergenic 128362 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr13-1204 chr13 51016795 51017005 + 7.78 0.000 intron (NR_003923, intron 11 of 16) intron (NR_003923, intron 11 of 16) 49257 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr4-2836 chr4 45953291 45953501 + 7.78 0.000 Intergenic AluJr|SINE|Alu 170658 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr19-6639 chr19 32733786 32733996 + 7.78 0.000 intron (NM_001366102, intron 2 of 32) intron (NM_001366102, intron 2 of 32) 14124 NM_001366102 91646 Hs.646351 NM_001015890 ENSG00000173809 TDRD12 ECAT8 tudor domain containing 12 protein-coding chr13-2016 chr13 38725510 38725720 + 7.78 0.000 intron (NM_207361, intron 2 of 23) L2a|LINE|L2 38538 NM_207361 341640 Hs.253994 NM_207361 ENSG00000150893 FREM2 CRYPTOP|FRASRS2 FRAS1 related extracellular matrix 2 protein-coding chr16-3355 chr16 35316024 35316234 + 7.78 0.000 Intergenic Intergenic -47287 NR_027080 283914 Hs.385772 NR_027079 ENSG00000259841 LINC01566 - long intergenic non-protein coding RNA 1566 ncRNA chr10-9032 chr10 123319824 123320034 + 7.78 0.000 Intergenic Intergenic 165527 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr5-2204 chr5 164027832 164028042 + 7.78 0.000 Intergenic Intergenic 439465 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr3-9119 chr3 30673201 30673411 + 7.78 0.000 intron (NM_001024847, intron 5 of 7) intron (NM_001024847, intron 5 of 7) 66705 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr16-6894 chr16 84667724 84667934 + 7.78 0.000 TTS (NM_024731) TTS (NM_024731) 19318 NM_024731 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr18-1363 chr18 12295322 12295532 + 7.78 0.000 Intergenic AluSx1|SINE|Alu -12242 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chrX-3467 chrX 29880772 29880982 + 7.78 0.000 intron (NM_014271, intron 6 of 10) intron (NM_014271, intron 6 of 10) 306599 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr3-7367 chr3 53500358 53500568 + 7.78 0.000 intron (NM_001128840, intron 2 of 47) intron (NM_001128840, intron 2 of 47) 5852 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr5-5282 chr5 123487095 123487305 + 7.78 0.000 Intergenic Intergenic -24899 NM_001031812 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr6-7150 chr6 36526743 36526953 + 7.78 0.000 intron (NM_007271, intron 2 of 13) AluSz|SINE|Alu 20631 NM_001305102 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr5-5963 chr5 111016838 111017048 + 7.78 0.000 Intergenic Intergenic -53137 NR_045089 85480 Hs.389874 NM_033035 ENSG00000145777 TSLP - thymic stromal lymphopoietin protein-coding chr4-2543 chr4 72817102 72817312 + 7.78 0.000 Intergenic Intergenic -247986 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr16-2694 chr16 83539945 83540155 + 7.78 0.000 intron (NM_001220489, intron 6 of 12) intron (NM_001220489, intron 6 of 12) 31704 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr3-7381 chr3 69488708 69488918 + 7.78 0.000 Intergenic AluSg4|SINE|Alu -102725 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr7-4905 chr7 128876409 128876619 + 7.78 0.000 TTS (NM_001366122) TTS (NM_001366122) 10184 NM_001195150 100130705 Hs.641532 NM_001195150 ENSG00000272899 ATP6V1FNB - ATP6V1F neighbor protein-coding chr22-2208 chr22 18057706 18057916 + 7.78 0.000 Intergenic Intergenic -20109 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr1-8995 chr1 10476207 10476417 + 7.78 0.000 intron (NM_004565, intron 1 of 8) intron (NM_004565, intron 1 of 8) 1362 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr7-4170 chr7 107771484 107771694 + 7.78 0.000 intron (NM_000111, intron 18 of 20) L2c|LINE|L2 -27008 NR_144537 101927974 Hs.432792 NR_144536 ENSG00000241764 LOC101927974 - uncharacterized LOC101927974 ncRNA chr19-2162 chr19 11072102 11072312 + 7.78 0.000 Intergenic AluSz|SINE|Alu -17155 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr2-10799 chr2 45983232 45983442 + 7.78 0.000 intron (NM_005400, intron 5 of 14) intron (NM_005400, intron 5 of 14) -314070 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr2-8819 chr2 169507879 169508089 + 7.78 0.000 Intergenic Intergenic -1718 NM_006063 10324 Hs.50550 NM_006063 ENSG00000239474 KLHL41 KBTBD10|Krp1|SARCOSIN kelch like family member 41 protein-coding chr14-712 chr14 99792991 99793201 + 7.78 0.000 promoter-TSS (NM_001008707) promoter-TSS (NM_001008707) -317 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr7-5128 chr7 5171551 5171761 + 7.78 0.000 Intergenic AluJo|SINE|Alu -18577 NM_016003 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr6-2605 chr6 123585377 123585587 + 7.78 0.000 intron (NM_001256020, intron 1 of 8) HERVH-int|LTR|ERV1 51468 NM_006073 10345 Hs.144744 NM_006073 ENSG00000186439 TRDN CPVT5|TDN|TRISK triadin protein-coding chr14-3252 chr14 77211880 77212090 + 7.78 0.000 intron (NM_020431, intron 1 of 23) intron (NM_020431, intron 1 of 23) 30187 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding chr2-9453 chr2 234366790 234367000 + 7.78 0.000 Intergenic Intergenic 87700 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr7-6269 chr7 135829146 135829356 + 7.78 0.000 Intergenic MamRTE1|LINE|RTE-BovB -80438 NM_001369697 389558 Hs.55200 NM_205855 ENSG00000189320 FAM180A UNQ1940 family with sequence similarity 180 member A protein-coding chr19-5881 chr19 46265272 46265482 + 7.78 0.000 Intergenic Intergenic -31665 NM_152795 64344 Hs.420830 NM_022462 ENSG00000124440 HIF3A HIF-3A|HIF3-alpha-1|IPAS|MOP7|PASD7|bHLHe17 hypoxia inducible factor 3 subunit alpha protein-coding chr3-4209 chr3 133712015 133712225 + 7.78 0.000 intron (NM_001354703, intron 5 of 22) L2b|LINE|L2 -34273 NM_001354704 7018 Hs.518267 NM_001063 ENSG00000091513 TF HEL-S-71p|PRO1557|PRO2086|TFQTL1 transferrin protein-coding chr1-14571 chr1 53315090 53315300 + 7.78 0.000 intron (NM_004631, intron 2 of 18) intron (NM_004631, intron 2 of 18) 12875 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr22-3989 chr22 38739753 38739963 + 7.78 0.000 exon (NM_001199580, exon 14 of 19) exon (NM_001199580, exon 14 of 19) 15608 NM_001199580 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr9-3966 chr9 137008814 137009024 + 7.78 0.000 intron (NM_212533, intron 46 of 48) intron (NM_212533, intron 46 of 48) -12351 NM_004669 9022 Hs.64746 NM_004669 ENSG00000169583 CLIC3 - chloride intracellular channel 3 protein-coding chrX-5250 chrX 137705266 137705476 + 7.78 0.000 Intergenic L1MB8|LINE|L1 139244 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr16-3764 chr16 27315804 27316014 + 7.78 0.000 intron (NM_001257997, intron 1 of 9) intron (NM_001257997, intron 1 of 9) 1935 NM_001257997 3566 Hs.513457 NM_000418 ENSG00000077238 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding chr10-7693 chr10 29598123 29598333 + 7.78 0.000 intron (NM_001323599, intron 3 of 38) L1MB3|LINE|L1 4118 NR_030634 100126327 NR_030634 ENSG00000216035 MIR938 MIRN938|hsa-mir-938 microRNA 938 ncRNA chr10-8729 chr10 103339168 103339378 + 7.78 0.000 intron (NM_032154, intron 3 of 6) AluJb|SINE|Alu 11867 NM_032154 84108 Hs.335808 NM_032154 ENSG00000156374 PCGF6 MBLR|RNF134 polycomb group ring finger 6 protein-coding chr6-5213 chr6 133719625 133719835 + 7.78 0.000 intron (NR_109982, intron 4 of 8) L2a|LINE|L2 -101417 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr19-4274 chr19 495465 495675 + 7.78 0.000 promoter-TSS (NM_130762) promoter-TSS (NM_130762) -916 NM_130760 8174 Hs.102598 NM_130760 ENSG00000099866 MADCAM1 MACAM1 mucosal vascular addressin cell adhesion molecule 1 protein-coding chr19-3938 chr19 49409274 49409484 + 7.78 0.000 intron (NM_144688, intron 14 of 19) intron (NM_144688, intron 14 of 19) 14062 NM_178449 113091 Hs.339845 NM_178449 ENSG00000142538 PTH2 TIP39 parathyroid hormone 2 protein-coding chr11-4126 chr11 40814006 40814216 + 7.78 0.000 intron (NM_020929, intron 1 of 4) THE1B-int|LTR|ERVL-MaLR -520981 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr3-8042 chr3 196891475 196891685 + 7.78 0.000 intron (NM_152699, intron 2 of 9) AluJr|SINE|Alu 23660 NM_152699 205564 Hs.240770 NM_152699 ENSG00000119231 SENP5 - SUMO specific peptidase 5 protein-coding chr7-5910 chr7 97201067 97201277 + 7.78 0.000 Intergenic Intergenic 84579 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr1-4312 chr1 37634608 37634818 + 7.78 0.000 5' UTR (NM_001242909, exon 1 of 7) 5' UTR (NM_001242909, exon 1 of 7) 179 NM_001038633 284654 Hs.135015 NM_173640 ENSG00000169218 RSPO1 CRISTIN3|RSPO R-spondin 1 protein-coding chr3-3238 chr3 39138565 39138775 + 7.78 0.000 TTS (NR_106880) TTS (NR_106880) 464 NR_106880 102466743 NR_106880 ENSG00000284158 MIR6822 hsa-mir-6822 microRNA 6822 ncRNA chr10-5681 chr10 99525988 99526198 + 7.78 0.000 TTS (NR_120618) TTS (NR_120618) 5084 NR_120618 101927324 Hs.642588 NR_120618 ENSG00000257582 LINC01475 - long intergenic non-protein coding RNA 1475 ncRNA chr19-3338 chr19 7641435 7641645 + 7.78 0.000 intron (NR_073560, intron 6 of 18) LTR16C|LTR|ERVL 4430 NM_001272034 6813 Hs.515104 NM_006949 ENSG00000076944 STXBP2 FHL5|Hunc18b|MUNC18-2|UNC18-2|UNC18B|pp10122 syntaxin binding protein 2 protein-coding chr1-14744 chr1 67286549 67286759 + 7.78 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -20710 NM_001258216 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr12-2935 chr12 77687127 77687337 + 7.78 0.000 Intergenic Intergenic -143662 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr10-7665 chr10 27553486 27553696 + 7.78 0.000 Intergenic Intergenic 49287 NM_021252 22931 Hs.406799 NM_021252 ENSG00000099246 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding chr6-5952 chr6 78615097 78615307 + 7.78 0.000 Intergenic Intergenic -75893 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr16-4181 chr16 10776765 10776975 + 7.78 0.000 intron (NM_001318873, intron 2 of 7) MER41A|LTR|ERV1 33001 NM_001323597 4682 Hs.81469 NM_002484 ENSG00000103274 NUBP1 CIAO5|NBP|NBP1|NBP35 nucleotide binding protein 1 protein-coding chr8-6596 chr8 72816620 72816830 + 7.78 0.000 intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) 84680 NR_110656 101926908 Hs.680588 NR_110656 ENSG00000253726 LOC101926908 - uncharacterized LOC101926908 ncRNA chr2-8765 chr2 164261366 164261576 + 7.78 0.000 Intergenic L1PA4|LINE|L1 307024 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr18-1365 chr18 22965436 22965646 + 7.78 0.000 intron (NM_002894, intron 4 of 18) HAL1|LINE|L1 31665 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr8-3353 chr8 42338552 42338762 + 7.78 0.000 exon (NM_002690, exon 1 of 14) exon (NM_002690, exon 1 of 14) 163 NM_002690 5423 Hs.654484 NM_002690 ENSG00000070501 POLB - DNA polymerase beta protein-coding chr5-7131 chr5 934662 934872 + 7.78 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 41883 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr5-6501 chr5 285136 285346 + 7.78 0.000 intron (NM_001267557, intron 2 of 3) MLT2B4|LTR|ERVL 13595 NM_001267559 10016 Hs.50823 NM_013232 ENSG00000249915 PDCD6 ALG-2|ALG2|PEF1B programmed cell death 6 protein-coding chr9-7345 chr9 14851249 14851459 + 7.78 0.000 exon (NM_144966, exon 7 of 38) exon (NM_144966, exon 7 of 38) 59074 NM_001370063 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr3-6245 chr3 67937690 67937900 + 7.78 0.000 intron (NR_109992, intron 6 of 6) intron (NR_109992, intron 6 of 6) -53797 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr7-9687 chr7 153340004 153340214 + 7.78 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 72125 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr1-14492 chr1 48970738 48970948 + 7.78 0.000 intron (NM_001323575, intron 5 of 12) intron (NM_001323575, intron 5 of 12) -193874 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr4-4105 chr4 6191236 6191446 + 7.78 0.000 intron (NM_144720, intron 1 of 12) intron (NM_144720, intron 1 of 12) 3278 NM_001306134 152789 Hs.479066 NM_144720 ENSG00000152969 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding chr15-5308 chr15 101801048 101801258 + 7.78 0.000 Intergenic Intergenic -4567 NM_001005326 390648 Hs.553399 NM_001005326 ENSG00000184140 OR4F6 OR15-15|OR4F12 olfactory receptor family 4 subfamily F member 6 protein-coding chr2-7130 chr2 190928416 190928626 + 7.78 0.000 intron (NM_014905, intron 12 of 17) AluSq|SINE|Alu 47700 NM_001256310 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr2-7419 chr2 9799786 9799996 + 7.78 0.000 Intergenic Intergenic -43551 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr3-7658 chr3 35829838 35830048 + 7.78 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 85467 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr15-3910 chr15 27589836 27590046 + 7.78 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -428622 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr8-2860 chr8 134444560 134444770 + 7.78 0.000 Intergenic Intergenic -153406 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr17-5971 chr17 76998164 76998374 + 7.78 0.000 Intergenic Intergenic -29070 NR_136417 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr8-4230 chr8 88249276 88249486 + 7.78 0.000 intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 78102 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr17-8155 chr17 59988628 59988838 + 7.78 0.000 intron (NR_002924, intron 9 of 13) L2a|LINE|L2 23637 NR_110816 101927755 Hs.733307 NR_110815 ENSG00000267302 RNFT1-DT - RNFT1 divergent transcript ncRNA chr10-8568 chr10 95279479 95279689 + 7.78 0.000 intron (NM_020992, intron 1 of 6) intron (NM_020992, intron 1 of 6) 11419 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr9-7796 chr9 79945022 79945232 + 7.78 0.000 intron (NR_121213, intron 1 of 2) MER91B|DNA|hAT-Tip100 -29896 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr1-8545 chr1 161185449 161185659 + 7.78 0.000 3' UTR (NM_005099, exon 9 of 9) 3' UTR (NM_005099, exon 9 of 9) -7586 NM_001199873 8703 Hs.321231 NM_003779 ENSG00000158850 B4GALT3 beta4Gal-T3 beta-1,4-galactosyltransferase 3 protein-coding chr4-5834 chr4 104310326 104310536 + 7.78 0.000 Intergenic L1MB4|LINE|L1 -180534 NR_125926 101929468 Hs.480435 NR_125926 ENSG00000245384 CXXC4-AS1 - CXXC4 antisense RNA 1 ncRNA chr20-2063 chr20 10596644 10596854 + 7.78 0.000 intron (NM_001009608, intron 4 of 7) intron (NM_001009608, intron 4 of 7) 52946 NR_106930 102465525 NR_106930 ENSG00000273745 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA chr2-9642 chr2 19474345 19474555 + 7.78 0.000 Intergenic Intergenic -115827 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr2-14435 chr2 222485146 222485356 + 7.78 0.000 intron (NM_152386, intron 2 of 4) intron (NM_152386, intron 2 of 4) 60708 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr17-4485 chr17 66646226 66646436 + 7.78 0.000 intron (NM_002737, intron 5 of 16) MamRep605|LTR?|LTR? -140741 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr2-3248 chr2 238104986 238105196 + 7.78 0.000 intron (NM_194312, intron 3 of 8) intron (NM_194312, intron 3 of 8) 4751 NM_194312 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr14-4299 chr14 20893852 20894062 + 7.78 0.000 Intergenic Intergenic 2554 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding chr6-7997 chr6 116204879 116205089 + 7.78 0.000 intron (NM_152729, intron 6 of 11) intron (NM_152729, intron 6 of 11) 49091 NM_021648 23270 Hs.284141 NM_021648 ENSG00000187189 TSPYL4 dJ486I3.2 TSPY like 4 protein-coding chr7-3906 chr7 119390824 119391034 + 7.78 0.000 Intergenic MSTC|LTR|ERVL-MaLR 516446 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr11-9439 chr11 61037774 61037984 + 7.78 0.000 Intergenic Intergenic -56084 NM_001346456 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr17-2928 chr17 49567999 49568209 + 7.78 0.000 intron (NR_103773, intron 1 of 2) CpG 5960 NR_103773 100288866 Hs.720309 NR_103773 ENSG00000249906 LOC100288866 - uncharacterized LOC100288866 ncRNA chr5-5605 chr5 151636218 151636428 + 7.78 0.000 Intergenic Intergenic -40622 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr1-7904 chr1 156069826 156070036 + 7.78 0.000 intron (NR_133653, intron 3 of 3) intron (NR_133653, intron 3 of 3) 8771 NR_133653 57111 Hs.632469 NM_020387 ENSG00000132698 RAB25 CATX-8|RAB11C RAB25, member RAS oncogene family protein-coding chr1-15589 chr1 160563797 160564007 + 7.78 0.000 intron (NM_001184882, intron 1 of 5) MER33|DNA|hAT-Charlie 15594 NM_001330742 8832 Hs.398093 NM_003874 ENSG00000066294 CD84 LY9B|SLAMF5|hCD84|mCD84 CD84 molecule protein-coding chr1-12359 chr1 3084813 3085023 + 7.78 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 15715 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr10-6127 chr10 132976941 132977151 + 7.78 0.000 TTS (NR_046231) TTS (NR_046231) 11512 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA chr7-8660 chr7 71594794 71595004 + 7.78 0.000 intron (NM_022479, intron 6 of 10) MLT1C|LTR|ERVL-MaLR -287129 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr1-7392 chr1 30653058 30653268 + 7.78 0.000 Intergenic MIR|SINE|MIR -65609 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr19-5109 chr19 56257142 56257352 + 7.78 0.000 intron (NM_001322061, intron 2 of 6) intron (NM_001322061, intron 2 of 6) -15501 NM_001354658 100506374 Hs.631532 NM_001354658 ENSG00000267710 EDDM13 - epididymal protein 13 protein-coding chr3-7105 chr3 182208360 182208570 + 7.78 0.000 Intergenic Intergenic 256101 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr1-10154 chr1 109167318 109167528 + 7.78 0.000 intron (NM_001284352, intron 2 of 20) intron (NM_001284352, intron 2 of 20) -19126 NM_001284353 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding chr4-4164 chr4 8335093 8335303 + 7.78 0.000 Intergenic Intergenic 15022 NR_149125 105374374 Hs.145224 NR_149125 ENSG00000249145 LINC02517 - long intergenic non-protein coding RNA 2517 ncRNA chr15-4399 chr15 43338589 43338799 + 7.78 0.000 intron (NM_001324368, intron 6 of 10) intron (NM_001324368, intron 6 of 10) 8022 NM_001159280 161823 Hs.533913 NM_001012969 ENSG00000168803 ADAL - adenosine deaminase like protein-coding chr22-801 chr22 21038809 21039019 + 7.78 0.000 Intergenic MER34-int|LTR|ERV1 -4642 NR_030379 693234 NR_030379 ENSG00000207575 MIR649 MIRN649|hsa-mir-649 microRNA 649 ncRNA chr7-8637 chr7 70426945 70427155 + 7.78 0.000 intron (NM_015570, intron 4 of 18) intron (NM_015570, intron 4 of 18) -705094 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr11-4383 chr11 76288543 76288753 + 7.78 0.000 Intergenic Intergenic -82146 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr4-4873 chr4 114577251 114577461 + 7.78 0.000 Intergenic L1PREC2|LINE|L1 -21046 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr22-2711 chr22 38050530 38050740 + 7.78 0.000 Intergenic Intergenic -6620 NM_001039583 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr9-7493 chr9 30972954 30973164 + 7.78 0.000 Intergenic Intergenic 408431 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr2-2686 chr2 8679128 8679338 + 7.78 0.000 TTS (NR_110153) TTS (NR_110153) 2628 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr19-5644 chr19 5419120 5419330 + 7.78 0.000 Intergenic L2a|LINE|L2 -36192 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr2-10671 chr2 22798654 22798864 + 7.78 0.000 Intergenic Intergenic 262280 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr11-6920 chr11 109062410 109062620 + 7.78 0.000 Intergenic Intergenic -359675 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr7-3110 chr7 30520608 30520818 + 7.78 0.000 Intergenic Intergenic -15872 NM_001199816 79017 Hs.530024 NM_024051 ENSG00000006625 GGCT C7orf24|CRF21|GCTG|GGC gamma-glutamylcyclotransferase protein-coding chr11-10529 chr11 119993764 119993974 + 7.78 0.000 Intergenic Intergenic 134984 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr12-4941 chr12 69783571 69783781 + 7.78 0.000 intron (NM_001024647, intron 1 of 8) intron (NM_001024647, intron 1 of 8) 4724 NM_001024647 117177 Hs.258209 NM_022456 ENSG00000127328 RAB3IP RABIN3|RABIN8 RAB3A interacting protein protein-coding chr11-5194 chr11 11852673 11852883 + 7.78 0.000 intron (NM_017944, intron 1 of 26) HAL1|LINE|L1 11355 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr17-4482 chr17 65348265 65348475 + 7.78 0.000 Intergenic Intergenic -109171 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr8-5557 chr8 73961407 73961617 + 7.78 0.000 intron (NM_001204857, intron 1 of 3) intron (NM_001204857, intron 1 of 3) 10396 NM_001204862 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding chr18-3329 chr18 56471184 56471394 + 7.78 0.000 Intergenic Intergenic 167303 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr4-4824 chr4 108243832 108244042 + 7.78 0.000 Intergenic MIRb|SINE|MIR 71817 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr1-12273 chr1 227387771 227387981 + 7.78 0.000 Intergenic AluSx1|SINE|Alu -69384 NM_001366011 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr13-3018 chr13 19627138 19627348 + 7.78 0.000 Intergenic HERVK9-int|LTR|ERVK -6416 NM_017520 54737 Hs.269654 NM_017520 ENSG00000196199 MPHOSPH8 HSMPP8|TWA3|mpp8 M-phase phosphoprotein 8 protein-coding chr11-9504 chr11 63052062 63052272 + 7.78 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -36322 NM_001184733 9376 Hs.266223 NM_004254 ENSG00000149452 SLC22A8 OAT3 solute carrier family 22 member 8 protein-coding chr11-6750 chr11 83332770 83332980 + 7.78 0.000 Intergenic MER46C|DNA|TcMar-Tigger -46468 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr4-7795 chr4 97647657 97647867 + 7.78 0.000 intron (NM_174952, intron 10 of 10) intron (NM_174952, intron 10 of 10) 280836 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr3-4720 chr3 61617461 61617671 + 7.78 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 55995 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr16-4576 chr16 67368515 67368725 + 7.78 0.000 intron (NM_018296, intron 8 of 13) L2a|LINE|L2 21265 NM_001161575 55282 Hs.125139 NM_018296 ENSG00000159708 LRRC36 RORBP70|XLHSRF2 leucine rich repeat containing 36 protein-coding chr18-2473 chr18 45611648 45611858 + 7.78 0.000 intron (NM_001371319, intron 5 of 23) MIRc|SINE|MIR -3723 NM_007163 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr5-8240 chr5 110366726 110366936 + 7.78 0.000 Intergenic Intergenic 147084 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr14-4311 chr14 21776080 21776290 + 7.78 0.000 Intergenic Intergenic -105168 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr2-5795 chr2 229066922 229067132 + 7.78 0.000 intron (NM_001330157, intron 1 of 1) THE1C|LTR|ERVL-MaLR 165065 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr2-8543 chr2 132791819 132792029 + 7.78 0.000 intron (NM_207481, intron 12 of 17) intron (NM_207481, intron 12 of 17) -120398 NM_001077427 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr5-8868 chr5 154168558 154168768 + 7.78 0.000 Intergenic Intergenic -22070 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr3-11169 chr3 190761208 190761418 + 7.78 0.000 Intergenic L1MA9|LINE|L1 101381 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr19-5044 chr19 49244790 49245000 + 7.78 0.000 Intergenic AluSx3|SINE|Alu 63973 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr7-9558 chr7 141534724 141534934 + 7.78 0.000 Intergenic Intergenic -16581 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr2-12576 chr2 70088617 70088827 + 7.78 0.000 exon (NM_006196, exon 1 of 1) exon (NM_006196, exon 1 of 1) 1245 NM_006196 5093 Hs.2853 NM_006196 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding chr4-5209 chr4 164900841 164901051 + 7.78 0.000 Intergenic Intergenic 23768 NM_001297550 100506013 Hs.105196 NM_001297550 ENSG00000248329 APELA ELA|Ende|tdl apelin receptor early endogenous ligand protein-coding chr7-4742 chr7 66614533 66614743 + 7.78 0.000 Intergenic SVA_C|Retroposon|SVA -14243 NM_001167961 154881 Hs.546627 NM_153033 ENSG00000243335 KCTD7 CLN14|EPM3 potassium channel tetramerization domain containing 7 protein-coding chr6-8556 chr6 162474928 162475138 + 7.78 0.000 intron (NM_004562, intron 1 of 11) intron (NM_004562, intron 1 of 11) -252099 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr10-8410 chr10 84252395 84252605 + 7.78 0.000 intron (NM_001012720, intron 3 of 6) MIRb|SINE|MIR 7447 NM_001012720 5995 Hs.1544 NM_002921 ENSG00000148604 RGR RP44 retinal G protein coupled receptor protein-coding chr22-2685 chr22 37149795 37150005 + 7.78 0.000 promoter-TSS (NM_000878) promoter-TSS (NM_000878) 16 NM_000878 3560 Hs.474787 NM_000878 ENSG00000100385 IL2RB CD122|IL15RB|P70-75 interleukin 2 receptor subunit beta protein-coding chr2-12347 chr2 49937478 49937688 + 7.78 0.000 intron (NM_001330097, intron 5 of 5) intron (NM_001330097, intron 5 of 5) 36620 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr10-5348 chr10 72059863 72060073 + 7.78 0.000 3' UTR (NM_001244950, exon 11 of 11) 3' UTR (NM_001244950, exon 11 of 11) 28583 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr3-4562 chr3 156208423 156208633 + 7.78 0.000 intron (NM_003471, intron 1 of 13) intron (NM_003471, intron 1 of 13) 19355 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr12-4949 chr12 71601621 71601831 + 7.78 0.000 Intergenic Intergenic 62122 NM_144982 196441 Hs.245798 NM_144982 ENSG00000133858 ZFC3H1 CCDC131|CSRC2|PSRC2 zinc finger C3H1-type containing protein-coding chr12-6028 chr12 109163544 109163754 + 7.78 0.000 intron (NM_001093, intron 2 of 52) AluSz|SINE|Alu 47062 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr22-3650 chr22 22219248 22219458 + 7.78 0.000 Intergenic Intergenic -25433 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr8-3912 chr8 41455472 41455682 + 7.78 0.000 Intergenic A-rich|Low_complexity|Low_complexity 28922 NR_145746 109616980 NR_145746 ENSG00000238936 SNORD65B - small nucleolar RNA, C/D box 65B snoRNA chr1-9172 chr1 20556614 20556824 + 7.78 0.000 Intergenic Intergenic 4146 NM_207334 163933 Hs.429179 NM_207334 ENSG00000183114 FAM43B - family with sequence similarity 43 member B protein-coding chr18-3527 chr18 75595739 75595949 + 7.78 0.000 Intergenic Intergenic 116559 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chr1-8221 chr1 26358916 26359126 + 7.78 0.000 Intergenic MIR|SINE|MIR -4891 NM_001039775 55057 Hs.128738 NM_017977 ENSG00000176092 CRYBG2 AIM1L crystallin beta-gamma domain containing 2 protein-coding chr18-2412 chr18 9160257 9160467 + 7.78 0.000 intron (NM_001204056, intron 1 of 11) AluJb|SINE|Alu 22799 NM_001204056 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding chr16-6417 chr16 56057401 56057611 + 7.78 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -101475 NM_001190158 221223 Hs.350800 NM_145024 ENSG00000159398 CES5A CAUXIN|CES4C1|CES5|CES7|HEL126 carboxylesterase 5A protein-coding chr7-9615 chr7 149656542 149656752 + 7.78 0.000 Intergenic AluSx4|SINE|Alu -31857 NR_027789 79970 Hs.520785 NM_024910 ENSG00000133624 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo chr3-6731 chr3 137975400 137975610 + 7.78 0.000 Intergenic L2c|LINE|L2 -23311 NM_001002026 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr7-9169 chr7 114008120 114008330 + 7.78 0.000 Intergenic AluSx|SINE|Alu -78102 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr3-5081 chr3 45438526 45438736 + 7.78 0.000 intron (NM_001368263, intron 5 of 20) AluSx1|SINE|Alu 50055 NM_015340 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr8-4150 chr8 76408113 76408323 + 7.78 0.000 intron (NR_105006, intron 1 of 5) intron (NR_105006, intron 1 of 5) 1564 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr4-4028 chr4 2130435 2130645 + 7.78 0.000 intron (NM_181808, intron 17 of 25) intron (NM_181808, intron 17 of 25) 71213 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr20-4229 chr20 48063405 48063615 + 7.78 0.000 Intergenic L2a|LINE|L2 -73393 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA chrX-3768 chrX 130601545 130601755 + 7.78 0.000 Intergenic MLT1G1-int|LTR|ERVL-MaLR 106709 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr2-13789 chr2 172806438 172806648 + 7.78 0.000 intron (NM_007023, intron 3 of 30) intron (NM_007023, intron 3 of 30) -15044 NM_001100397 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr7-7648 chr7 141396188 141396398 + 7.78 0.000 intron (NM_001195278, intron 2 of 3) intron (NM_001195278, intron 2 of 3) -155117 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr10-5784 chr10 104520812 104521022 + 7.78 0.000 Intergenic MIRb|SINE|MIR -40642 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr2-7709 chr2 33153020 33153230 + 7.78 0.000 intron (NM_206943, intron 5 of 33) intron (NM_206943, intron 5 of 33) 18528 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr20-4210 chr20 47024103 47024313 + 7.78 0.000 intron (NM_172110, intron 5 of 13) L1MEc|LINE|L1 129365 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr13-2665 chr13 83312068 83312278 + 7.78 0.000 Intergenic Intergenic 570220 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr3-9903 chr3 85120471 85120681 + 7.78 0.000 intron (NM_001167674, intron 1 of 9) L1PA7|LINE|L1 -58312 NR_132777 106635529 NR_132777 SNORA95 - small nucleolar RNA, H/ACA box 95 snoRNA chr19-4902 chr19 41792728 41792938 + 7.78 0.000 Intergenic MER20|DNA|hAT-Charlie -3754 NM_001815 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr4-2384 chr4 47246032 47246242 + 7.78 0.000 intron (NM_000812, intron 4 of 8) L1PB1|LINE|L1 214570 NM_000812 2560 Hs.27283 NM_000812 ENSG00000163288 GABRB1 EIEE45 gamma-aminobutyric acid type A receptor beta1 subunit protein-coding chr20-2753 chr20 50930571 50930781 + 7.78 0.000 promoter-TSS (NR_110007) promoter-TSS (NR_110007) -308 NR_110008 101927631 Hs.301898 NR_110007 ENSG00000259456 ADNP-AS1 - ADNP antisense RNA 1 ncRNA chr11-7098 chr11 122741778 122741988 + 7.78 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 86161 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chrX-5028 chrX 119685612 119685822 + 7.78 0.000 intron (NM_145799, intron 1 of 10) intron (NM_145799, intron 1 of 10) 7451 NM_145802 23157 Hs.496666 NM_015129 ENSG00000125354 SEPTIN6 SEP2|SEPT2|SEPT6 septin 6 protein-coding chr3-9105 chr3 28797039 28797249 + 7.78 0.000 Intergenic Intergenic 221866 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr12-5207 chr12 105597141 105597351 + 7.78 0.000 Intergenic L1PREC2|LINE|L1 -106957 NR_110108 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr2-6265 chr2 46164262 46164472 + 7.78 0.000 intron (NM_005400, intron 14 of 14) intron (NM_005400, intron 14 of 14) -133040 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr2-6770 chr2 44978186 44978396 + 7.78 0.000 Intergenic Intergenic 31161 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr8-3776 chr8 25031093 25031303 + 7.78 0.000 Intergenic Intergenic -74329 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr17-7761 chr17 34876637 34876847 + 7.78 0.000 Intergenic Intergenic 84718 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr3-9911 chr3 86237403 86237613 + 7.78 0.000 Intergenic Intergenic -244435 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr1-8836 chr1 3139775 3139985 + 7.78 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 11905 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr13-4239 chr13 96158349 96158559 + 7.78 0.000 intron (NM_153456, intron 1 of 1) AluSx3|SINE|Alu 67615 NM_153456 266722 Hs.171001 NM_153456 ENSG00000185352 HS6ST3 HS6ST-3 heparan sulfate 6-O-sulfotransferase 3 protein-coding chr11-5465 chr11 75183634 75183844 + 7.78 0.000 intron (NM_007256, intron 7 of 13) AluJr|SINE|Alu 23907 NM_001145211 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr5-5245 chr5 119149354 119149564 + 7.78 0.000 exon (NM_001290322, exon 18 of 43) exon (NM_001290322, exon 18 of 43) -5178 NR_049892 100847085 NR_049892 ENSG00000264536 MIR5706 - microRNA 5706 ncRNA chr8-6999 chr8 108744499 108744709 + 7.78 0.000 intron (NR_136411, intron 1 of 3) LTR34|LTR|ERV1 42990 NM_153015 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr10-3222 chr10 102776459 102776669 + 7.78 0.000 intron (NM_017787, intron 1 of 3) intron (NM_017787, intron 1 of 3) 343 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr1-6877 chr1 116318563 116318773 + 7.78 0.000 Intergenic Intergenic -54576 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr1-9731 chr1 53639573 53639783 + 7.78 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 94526 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr17-8334 chr17 73430391 73430601 + 7.78 0.000 intron (NM_001144952, intron 12 of 44) intron (NM_001144952, intron 12 of 44) -83187 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr20-4497 chr20 63171345 63171555 + 7.78 0.000 Intergenic Intergenic -7050 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA chr8-3304 chr8 26402172 26402382 + 7.78 0.000 intron (NM_004331, intron 3 of 5) intron (NM_004331, intron 3 of 5) 11864 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr2-11658 chr2 7139831 7140041 + 7.78 0.000 Intergenic L1MCa|LINE|L1 -62056 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr3-7104 chr3 182072425 182072635 + 7.78 0.000 Intergenic L1MA4|LINE|L1 120166 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr1-16169 chr1 206444351 206444561 + 7.78 0.000 intron (NM_015326, intron 16 of 21) intron (NM_015326, intron 16 of 21) -26020 NM_001193322 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of nuclear factor kappa B kinase subunit epsilon protein-coding chr5-5306 chr5 126576999 126577209 + 7.78 0.000 exon (NM_001182, exon 6 of 18) exon (NM_001182, exon 6 of 18) 18115 NM_001202404 501 Hs.483239 NM_001182 ENSG00000164904 ALDH7A1 ATQ1|EPD|PDE aldehyde dehydrogenase 7 family member A1 protein-coding chr12-4902 chr12 66626973 66627183 + 7.78 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) 51998 NM_001366722 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr5-4508 chr5 12574720 12574930 + 7.78 0.000 promoter-TSS (NR_033383) promoter-TSS (NR_033383) -32 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA chr4-7766 chr4 94472164 94472374 + 7.78 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 20327 NM_001256428 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr16-3742 chr16 12118863 12119073 + 7.78 0.000 intron (NM_032167, intron 11 of 20) intron (NM_032167, intron 11 of 20) 142234 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr17-5138 chr17 7961588 7961798 + 7.78 0.000 Intergenic Intergenic 29487 NM_001353205 116840 Hs.348012 NM_053051 ENSG00000170037 CNTROB LIP8|PP1221 centrobin, centriole duplication and spindle assembly protein protein-coding chr8-3024 chr8 124613699 124613909 + 7.78 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 74681 NM_005005 4715 Hs.15977 NM_005005 ENSG00000147684 NDUFB9 B22|CI-B22|LYRM3|MC1DN24|UQOR22 NADH:ubiquinone oxidoreductase subunit B9 protein-coding chr10-7601 chr10 20185345 20185555 + 7.78 0.000 intron (NM_032812, intron 9 of 13) intron (NM_032812, intron 9 of 13) -366520 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr1-8442 chr1 99360788 99360998 + 7.78 0.000 Intergenic LTR16C|LTR|ERVL 96601 NM_001166252 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chr9-6964 chr9 105314264 105314474 + 7.78 0.000 intron (NM_001330731, intron 3 of 15) intron (NM_001330731, intron 3 of 15) 69718 NM_001286730 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr9-7284 chr9 7784041 7784251 + 7.78 0.000 Intergenic Intergenic 15632 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr17-3769 chr17 33399682 33399892 + 7.78 0.000 intron (NM_001094, intron 1 of 9) (GT)n|Simple_repeat|Simple_repeat -106799 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr8-3962 chr8 48660501 48660711 + 7.78 0.000 intron (NR_105002, intron 2 of 3) L1MC3|LINE|L1 40203 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA chr22-2611 chr22 32098172 32098382 + 7.78 0.000 intron (NM_000343, intron 11 of 14) intron (NM_000343, intron 11 of 14) -23700 NR_040114 23782 Hs.581098 NR_040114 ENSG00000234479 AP1B1P1 ADTB1L1|dJ127L4.2 AP1B1 pseudogene 1 pseudo chr15-5160 chr15 92166501 92166711 + 7.78 0.000 TTS (NM_013272) TTS (NM_013272) -227275 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr13-4332 chr13 102033567 102033777 + 7.78 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) 12332 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr2-10634 chr2 13130328 13130538 + 7.78 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -123420 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr2-5905 chr2 5933674 5933884 + 7.78 0.000 intron (NR_026832, intron 1 of 1) intron (NR_026832, intron 1 of 1) 1092 NR_026832 150622 Hs.560891 NR_026832 SILC1 LINC01105 sciatic injury induced lincRNA upregulator of SOX11 ncRNA chr2-12782 chr2 86216953 86217163 + 7.78 0.000 exon (NM_001371280, exon 6 of 6) exon (NM_001371280, exon 6 of 6) 17601 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr1-13290 chr1 230083711 230083921 + 7.78 0.000 intron (NM_004481, intron 1 of 15) intron (NM_004481, intron 1 of 15) 16578 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr22-2952 chr22 49044332 49044542 + 7.78 0.000 Intergenic Intergenic 177667 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr12-5093 chr12 94615800 94616010 + 7.78 0.000 promoter-TSS (NM_001301036) promoter-TSS (NM_001301036) 96 NM_001301036 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr1-9773 chr1 56043203 56043413 + 7.78 0.000 Intergenic Intergenic 98221 NR_147161 105378738 Hs.121473 NR_147161 ENSG00000233079 LINC01755 - long intergenic non-protein coding RNA 1755 ncRNA chr5-6314 chr5 127580441 127580651 + 7.78 0.000 Intergenic L1MA9|LINE|L1 62906 NM_130809 133619 Hs.483259 NM_130809 ENSG00000164244 PRRC1 - proline rich coiled-coil 1 protein-coding chr10-2945 chr10 31261597 31261807 + 7.78 0.000 TTS (NR_134478) TTS (NR_134478) -56715 NM_001323638 6935 Hs.124503 NM_030751 ENSG00000148516 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding chr2-5698 chr2 206869915 206870125 + 7.78 0.000 Intergenic MIRb|SINE|MIR -69498 NM_173077 130749 Hs.684103 NM_173077 ENSG00000144410 CPO - carboxypeptidase O protein-coding chr1-13895 chr1 21884482 21884692 + 7.78 0.000 exon (NM_001291860, exon 13 of 97) exon (NM_001291860, exon 13 of 97) 52723 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr22-3907 chr22 36200523 36200733 + 7.78 0.000 intron (NM_145660, intron 2 of 4) L1M5|LINE|L1 4205 NM_145660 80832 Hs.115099 NM_030643 ENSG00000100336 APOL4 APOL-IV|APOLIV apolipoprotein L4 protein-coding chr7-5243 chr7 17198931 17199141 + 7.78 0.000 Intergenic MIR3|SINE|MIR -99616 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr19-4117 chr19 17974430 17974640 + 7.78 0.000 intron (NM_002248, intron 3 of 10) intron (NM_002248, intron 3 of 10) 23233 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr13-2018 chr13 39038801 39039011 + 7.78 0.000 promoter-TSS (NM_025138) promoter-TSS (NM_025138) 450 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr7-9472 chr7 135039609 135039819 + 7.78 0.000 intron (NR_160300, intron 8 of 16) AluSz|SINE|Alu 53206 NM_001367814 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr18-2818 chr18 5614039 5614249 + 7.78 0.000 intron (NM_001281535, intron 2 of 21) intron (NM_001281535, intron 2 of 21) 14847 NM_001281535 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr5-8334 chr5 118279506 118279716 + 7.78 0.000 Intergenic Intergenic -2963 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr2-6967 chr2 126955156 126955366 + 7.78 0.000 Intergenic L1MB4|LINE|L1 56371 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr1-11702 chr1 8220866 8221076 + 7.78 0.000 Intergenic Intergenic 12299 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr5-5308 chr5 126729978 126730188 + 7.78 0.000 Intergenic MER5A|DNA|hAT-Charlie 46403 NR_134485 102723557 Hs.582207 NR_134485 ENSG00000251072 LMNB1-DT - LMNB1 divergent transcript ncRNA chr18-2289 chr18 76988527 76988737 + 7.78 0.000 intron (NM_001025081, intron 4 of 6) intron (NM_001025081, intron 4 of 6) 28423 NM_001025081 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr7-5173 chr7 6959894 6960104 + 7.78 0.000 Intergenic HERVH-int|LTR|ERV1 107046 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr7-9388 chr7 131046793 131047003 + 7.78 0.000 intron (NR_109850, intron 3 of 5) L1M4a1|LINE|L1 60132 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr6-4236 chr6 6112887 6113097 + 7.78 0.000 Intergenic L1ME2|LINE|L1 -56342 NR_049863 100847034 NR_049863 ENSG00000283616 MIR5683 - microRNA 5683 ncRNA chr10-5510 chr10 83003791 83004001 + 7.78 0.000 Intergenic L2a|LINE|L2 673193 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr2-9400 chr2 231521046 231521256 + 7.78 0.000 Intergenic AluJo|SINE|Alu -6812 NR_024079 151477 Hs.375211 NM_173513 ENSG00000181798 LINC00471 C2orf52 long intergenic non-protein coding RNA 471 ncRNA chr19-6606 chr19 28879300 28879510 + 7.78 0.000 Intergenic Intergenic -85726 NR_027318 148145 Hs.112651 NR_027318 ENSG00000267339 LINC00906 - long intergenic non-protein coding RNA 906 ncRNA chr14-5287 chr14 100665017 100665227 + 7.78 0.000 intron (NR_024096, intron 1 of 1) intron (NR_024096, intron 1 of 1) 7854 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chr9-6366 chr9 19918347 19918557 + 7.78 0.000 Intergenic Intergenic -131433 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr7-1920 chr7 4785137 4785347 + 7.78 0.000 intron (NR_157345, intron 7 of 16) intron (NR_157345, intron 7 of 16) 3397 NR_039800 100616465 NR_039800 ENSG00000264474 MIR4656 - microRNA 4656 ncRNA chr8-2445 chr8 118025064 118025274 + 7.78 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 86650 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr22-2401 chr22 16908131 16908341 + 7.78 0.000 Intergenic Intergenic 80762 NR_003607 27437 Hs.143955 NR_003607 ENSG00000229027 HSFY1P1 CECR8|HSFYL1|HSFYP1|NCRNA00016 HSFY1 pseudogene 1 pseudo chr17-8315 chr17 72047417 72047627 + 7.78 0.000 intron (NR_110877, intron 1 of 2) intron (NR_110877, intron 1 of 2) 10212 NR_110877 102723517 Hs.600042 NR_110877 ENSG00000234899 LOC102723517 - uncharacterized LOC102723517 ncRNA chr22-1343 chr22 21917265 21917475 + 7.78 0.000 Intergenic Intergenic -20867 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr11-10665 chr11 127499543 127499753 + 7.78 0.000 Intergenic MER5B|DNA|hAT-Charlie 228578 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr1-16385 chr1 222815522 222815732 + 7.78 0.000 intron (NM_032890, intron 1 of 9) intron (NM_032890, intron 1 of 9) 588 NM_032890 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr10-3850 chr10 13249014 13249224 + 7.78 0.000 Intergenic Intergenic -14745 NM_001303118 221044 Hs.112998 NM_145314 ENSG00000165623 UCMA C10orf49|GRP|GRP/UCMA upper zone of growth plate and cartilage matrix associated protein-coding chr7-8594 chr7 66825685 66825895 + 7.78 0.000 intron (NR_003934, intron 7 of 10) intron (NR_003934, intron 7 of 10) 19036 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseudogene 1 pseudo chr1-12177 chr1 191440145 191440355 + 7.78 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -211752 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr22-2423 chr22 19051779 19051989 + 7.78 0.000 intron (NM_001184781, intron 6 of 9) L1MD1|LINE|L1 -3509 NR_024157 25786 Hs.720269 NR_024157 ENSG00000273311 DGCR11 DGS-D DiGeorge syndrome critical region gene 11 ncRNA chr9-8084 chr9 98416168 98416378 + 7.78 0.000 intron (NM_005458, intron 7 of 18) intron (NM_005458, intron 7 of 18) -160624 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr1-6210 chr1 209645679 209645889 + 7.78 0.000 intron (NM_001017402, intron 2 of 21) intron (NM_001017402, intron 2 of 21) 5550 NM_001017402 3914 Hs.497636 NM_000228 ENSG00000196878 LAMB3 AI1A|BM600-125KDA|LAM5|LAMNB1 laminin subunit beta 3 protein-coding chr1-16560 chr1 234114627 234114837 + 7.78 0.000 intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -99479 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr11-5122 chr11 127072008 127072218 + 7.78 0.000 intron (NR_120578, intron 1 of 2) intron (NR_120578, intron 1 of 2) 5111 NR_120578 101929473 Hs.737523 NR_120578 ENSG00000255087 LOC101929473 - uncharacterized LOC101929473 ncRNA chr10-7605 chr10 20338467 20338677 + 7.78 0.000 Intergenic L1P1|LINE|L1 -213398 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr16-5451 chr16 1820382 1820592 + 7.78 0.000 intron (NM_005326, intron 3 of 8) intron (NM_005326, intron 3 of 8) 6338 NM_005326 3029 Hs.157394 NM_005326 ENSG00000063854 HAGH GLO2|GLX2|GLXII|HAGH1 hydroxyacylglutathione hydrolase protein-coding chr4-4793 chr4 103293912 103294122 + 7.78 0.000 Intergenic Intergenic -95674 NM_001286734 1062 Hs.75573 NM_001813 ENSG00000138778 CENPE CENP-E|KIF10|MCPH13|PPP1R61 centromere protein E protein-coding chr1-13326 chr1 242506254 242506464 + 7.78 0.000 intron (NM_001320272, intron 2 of 10) intron (NM_001320272, intron 2 of 10) 18337 NM_152666 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr16-6742 chr16 74864698 74864908 + 7.78 0.000 Intergenic AluSx1|SINE|Alu -89983 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr8-3401 chr8 66317549 66317759 + 7.78 0.000 Intergenic AluSq2|SINE|Alu 111323 NR_040434 100505676 Hs.121613 NM_001242759 ENSG00000246145 RRS1-AS1 - RRS1 antisense RNA 1 (head to head) ncRNA chr2-13168 chr2 120167497 120167707 + 7.78 0.000 intron (NM_001184937, intron 23 of 23) intron (NM_001184937, intron 23 of 23) 55798 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr16-5333 chr16 82092903 82093113 + 7.78 0.000 intron (NM_002153, intron 4 of 4) intron (NM_002153, intron 4 of 4) 57755 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chr18-3292 chr18 53728868 53729078 + 7.78 0.000 Intergenic Intergenic -147914 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr16-3894 chr16 75586591 75586801 + 7.78 0.000 Intergenic Intergenic 20317 NM_007285 11345 Hs.461379 NM_007285 ENSG00000034713 GABARAPL2 ATG8|ATG8C|GATE-16|GATE16|GEF-2|GEF2 GABA type A receptor associated protein like 2 protein-coding chr9-2329 chr9 19010323 19010533 + 7.78 0.000 intron (NM_001287049, intron 1 of 3) intron (NM_001287049, intron 1 of 3) 22781 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr13-3281 chr13 44199225 44199435 + 7.78 0.000 Intergenic Intergenic -3130 NR_107046 102465876 NR_107046 ENSG00000276319 MIR8079 hsa-mir-8079 microRNA 8079 ncRNA chr16-3152 chr16 75356850 75357060 + 7.78 0.000 intron (NM_006324, intron 5 of 6) AluSz6|SINE|Alu 76548 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr12-5261 chr12 109653519 109653729 + 7.78 0.000 Intergenic LTR26D|LTR|ERV1 -60201 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr2-5206 chr2 42765906 42766116 + 7.78 0.000 Intergenic Intergenic -1750 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr6-4395 chr6 25745458 25745668 + 7.78 0.000 Intergenic Intergenic -9136 NM_001286121 10050 Hs.282931 NM_005495 ENSG00000146039 SLC17A4 KAIA2138 solute carrier family 17 member 4 protein-coding chr2-10498 chr2 224449269 224449479 + 7.78 0.000 Intergenic L1MEi|LINE|L1 -47267 NM_001122779 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr9-5303 chr9 85748575 85748785 + 7.78 0.000 Intergenic L2|LINE|L2 -6651 NM_001286715 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr3-7567 chr3 197983883 197984093 + 7.78 0.000 non-coding (NR_026787, exon 7 of 16) non-coding (NR_026787, exon 7 of 16) 23771 NR_026786 89782 Hs.518540 NM_033029 ENSG00000185621 LMLN GP63|INV|IX14|LMNL1|MSP leishmanolysin like peptidase protein-coding chr14-3033 chr14 56980123 56980333 + 7.78 0.000 Intergenic Intergenic 167070 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA chr10-9103 chr10 126708583 126708793 + 7.78 0.000 Intergenic MER4A1|LTR|ERV1 -38178 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr12-2106 chr12 53259154 53259364 + 7.78 0.000 Intergenic Intergenic 7164 NM_032889 84975 Hs.654660 NM_032889 ENSG00000182544 MFSD5 hsMOT2 major facilitator superfamily domain containing 5 protein-coding chr3-5903 chr3 39680855 39681065 + 7.78 0.000 Intergenic L1PA11|LINE|L1 -127954 NM_001284423 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr8-3828 chr8 29607156 29607366 + 7.78 0.000 Intergenic Intergenic 140848 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA chr4-4260 chr4 20697554 20697764 + 7.78 0.000 intron (NR_133933, intron 1 of 9) MLT1A0|LTR|ERVL-MaLR 1377 NR_133933 133015 Hs.479298 NM_145048 ENSG00000163138 PACRGL C4orf28 parkin coregulated like protein-coding chrX-3648 chrX 99309792 99310002 + 7.78 0.000 Intergenic AluY|SINE|Alu 1100376 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr12-5990 chr12 96284807 96285017 + 7.78 0.000 intron (NM_002595, intron 13 of 16) intron (NM_002595, intron 13 of 16) 29414 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr5-3753 chr5 53044272 53044482 + 7.78 0.000 intron (NR_073106, intron 3 of 29) intron (NR_073106, intron 3 of 29) 55025 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr1-9930 chr1 76274463 76274673 + 7.78 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 199822 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr15-1460 chr15 91800113 91800323 + 7.78 0.000 Intergenic L1PA7|LINE|L1 -53490 NM_013272 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr12-6476 chr12 101044801 101045011 + 7.78 0.000 intron (NM_001286616, intron 12 of 26) intron (NM_001286616, intron 12 of 26) -93652 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr6-6387 chr6 75952249 75952459 + 7.78 0.000 intron (NM_001563, intron 12 of 16) intron (NM_001563, intron 12 of 16) 120308 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr3-8432 chr3 113656381 113656591 + 7.78 0.000 exon (NM_001009899, exon 7 of 7) exon (NM_001009899, exon 7 of 7) 40156 NM_001009899 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr17-7883 chr17 43105122 43105332 + 7.78 0.000 intron (NR_027676, intron 4 of 22) intron (NR_027676, intron 4 of 22) 18888 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr1-13217 chr1 211929211 211929421 + 7.78 0.000 Intergenic L2b|LINE|L2 98355 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr2-8291 chr2 103270208 103270418 + 7.78 0.000 Intergenic L2c|LINE|L2 -285884 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr20-1263 chr20 43023065 43023275 + 7.78 0.000 intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) 54427 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA chr2-11384 chr2 213577171 213577381 + 7.78 0.000 intron (NR_047660, intron 9 of 14) intron (NR_047660, intron 9 of 14) -180791 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr3-8412 chr3 106428880 106429090 + 7.78 0.000 Intergenic L2a|LINE|L2 -559584 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr15-3291 chr15 77832424 77832634 + 7.78 0.000 Intergenic Intergenic -11629 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr20-3294 chr20 9830708 9830918 + 7.78 0.000 intron (NM_020341, intron 1 of 10) intron (NM_020341, intron 1 of 10) 8263 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr4-7686 chr4 87639099 87639309 + 7.78 0.000 Intergenic L1PA8|LINE|L1 -11076 NM_001079911 1758 Hs.652366 NM_004407 ENSG00000152592 DMP1 ARHP|ARHR|DMP-1 dentin matrix acidic phosphoprotein 1 protein-coding chr11-7614 chr11 46972373 46972583 + 7.78 0.000 intron (NM_001278222, intron 1 of 7) intron (NM_001278222, intron 1 of 7) 35717 NM_001003677 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chrX-3745 chrX 123908715 123908925 + 7.78 0.000 non-coding (NR_037916, exon 6 of 6) non-coding (NR_037916, exon 6 of 6) 48653 NM_001167 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr3-10283 chr3 125072801 125073011 + 7.78 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -16909 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr19-1696 chr19 17245921 17246131 + 7.78 0.000 promoter-TSS (NM_005234) promoter-TSS (NM_005234) -684 NM_005234 2063 Hs.466148 NM_005234 ENSG00000160113 NR2F6 EAR-2|EAR2|ERBAL2 nuclear receptor subfamily 2 group F member 6 protein-coding chr8-7094 chr8 118120634 118120844 + 7.78 0.000 Intergenic Intergenic -8920 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr19-4981 chr19 46138878 46139088 + 7.78 0.000 Intergenic L1P4e|LINE|L1 -8799 NM_001002915 147920 Hs.99376 NM_001002915 ENSG00000204866 IGFL2 UNQ645|VPRI645 IGF like family member 2 protein-coding chr13-2501 chr13 52968099 52968309 + 7.78 0.000 Intergenic Intergenic -60609 NM_006418 10562 Hs.508113 NM_006418 ENSG00000102837 OLFM4 GC1|GW112|OLM4|OlfD|UNQ362|bA209J19.1|hGC-1|hOLfD olfactomedin 4 protein-coding chr2-8386 chr2 112658392 112658602 + 7.78 0.000 intron (NM_005415, intron 6 of 10) intron (NM_005415, intron 6 of 10) 12558 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding chr11-5982 chr11 19500151 19500361 + 7.78 0.000 intron (NM_001111018, intron 1 of 37) MLT1H|LTR|ERVL-MaLR 6973 NR_049725 100874012 Hs.434602 NR_049725 ENSG00000255043 NAV2-AS5 - NAV2 antisense RNA 5 ncRNA chr8-5274 chr8 139550572 139550782 + 7.78 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 152446 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr9-3837 chr9 130287028 130287238 + 7.78 0.000 intron (NM_001291815, intron 4 of 97) MER63A|DNA|hAT-Blackjack 21373 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr11-4803 chr11 3920042 3920252 + 7.78 0.000 intron (NM_001277962, intron 1 of 12) FLAM_C|SINE|Alu 64085 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr12-3414 chr12 107990463 107990673 + 7.78 0.000 Intergenic Intergenic -86797 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr4-5496 chr4 78936610 78936820 + 7.78 0.000 intron (NR_146465, intron 1 of 6) intron (NR_146465, intron 1 of 6) 2723 NM_001040202 152559 Hs.657312 NM_177453 ENSG00000163291 PAQR3 RKTG progestin and adipoQ receptor family member 3 protein-coding chr2-5582 chr2 173019291 173019501 + 7.78 0.000 intron (NM_001282901, intron 16 of 24) L2c|LINE|L2 -56450 NM_133646 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr1-4303 chr1 27100048 27100258 + 7.78 0.000 non-coding (NR_046474, exon 11 of 11) non-coding (NR_046474, exon 11 of 11) 54972 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr22-3358 chr22 26438983 26439193 + 7.78 0.000 intron (NM_020437, intron 2 of 3) intron (NM_020437, intron 2 of 3) 9828 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr10-4257 chr10 133615991 133616201 + 7.78 0.000 Intergenic Intergenic 10699 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family member B protein-coding chr20-3709 chr20 16189590 16189800 + 7.78 0.000 Intergenic Intergenic -203813 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr1-16221 chr1 209110260 209110470 + 7.78 0.000 Intergenic MER21B|LTR|ERVL 137911 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr11-9512 chr11 63757522 63757732 + 7.78 0.000 intron (NR_049750, intron 5 of 5) AluJr|SINE|Alu 11148 NM_001144936 65998 Hs.191073 NM_001144936 ENSG00000188070 C11orf95 - chromosome 11 open reading frame 95 protein-coding chr3-9277 chr3 41802893 41803103 + 7.78 0.000 intron (NR_136342, intron 18 of 34) AluSg|SINE|Alu 159105 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr3-6931 chr3 159170080 159170290 + 7.78 0.000 intron (NM_001197113, intron 1 of 10) Charlie4z|DNA|hAT-Charlie 100866 NM_001042706 654502 Hs.570685 NM_001042705 ENSG00000214216 IQCJ - IQ motif containing J protein-coding chr3-5389 chr3 156123480 156123690 + 7.78 0.000 intron (NM_172160, intron 1 of 13) intron (NM_172160, intron 1 of 13) 3037 NM_172160 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr1-9751 chr1 54559872 54560082 + 7.78 0.000 intron (NM_015547, intron 1 of 16) intron (NM_015547, intron 1 of 16) 11749 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chrX-2734 chrX 125533147 125533357 + 7.78 0.000 Intergenic L1MA1|LINE|L1 213381 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr10-4955 chr10 28331851 28332061 + 7.78 0.000 Intergenic Intergenic -28892 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr10-7697 chr10 29765555 29765765 + 7.78 0.000 Intergenic Intergenic -28724 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr1-11506 chr1 152013752 152013962 + 7.78 0.000 Intergenic MIR3|SINE|MIR -4421 NR_103561 441908 Hs.656557 NR_103561 NBPF18P - NBPF member 18, pseudogene pseudo chr3-7205 chr3 191085150 191085360 + 7.78 0.000 Intergenic Intergenic -113986 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding chr18-1739 chr18 6509555 6509765 + 7.78 0.000 Intergenic Intergenic -1756 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA chr16-3077 chr16 64049343 64049553 + 7.78 0.000 Intergenic Intergenic 1072615 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr16-6936 chr16 85472662 85472872 + 7.78 0.000 Intergenic Intergenic -138642 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr4-8257 chr4 139970877 139971087 + 7.78 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -157033 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr9-4710 chr9 126933601 126933811 + 7.78 0.000 intron (NM_001366400, intron 1 of 18) intron (NM_001366400, intron 1 of 18) 18267 NM_001366400 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr1-11490 chr1 115333358 115333568 + 7.78 0.000 intron (NM_002506, intron 1 of 2) intron (NM_002506, intron 1 of 2) 4773 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr2-11088 chr2 126706814 126707024 + 7.78 0.000 Intergenic Intergenic 50761 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr6-4952 chr6 102328541 102328751 + 7.78 0.000 Intergenic MSTA|LTR|ERVL-MaLR 929661 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr19-2571 chr19 917537 917747 + 7.78 0.000 exon (NM_032551, exon 1 of 5) exon (NM_032551, exon 1 of 5) 309 NM_032551 84634 Hs.208229 NM_032551 ENSG00000116014 KISS1R AXOR12|CPPB1|GPR54|HH8|HOT7T175|KISS-1R KISS1 receptor protein-coding chr17-6533 chr17 35605878 35606088 + 7.78 0.000 intron (NM_001030006, intron 4 of 21) intron (NM_001030006, intron 4 of 21) 18661 NM_001282 163 Hs.514819 NM_001282 ENSG00000006125 AP2B1 ADTB2|AP105B|AP2-BETA|CLAPB1 adaptor related protein complex 2 subunit beta 1 protein-coding chr17-4680 chr17 27446665 27446875 + 7.78 0.000 Intergenic MamTip1|DNA|hAT-Tip100 -9678 NM_001367810 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr17-6493 chr17 27832154 27832364 + 7.78 0.000 Intergenic MER57A-int|LTR|ERV1 -31730 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr18-2830 chr18 6554831 6555041 + 7.78 0.000 intron (NR_120518, intron 2 of 5) L1MB5|LINE|L1 43520 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA chr21-1634 chr21 21993719 21993929 + 7.78 0.000 Intergenic Intergenic 104635 NR_109959 101927843 Hs.652879 NR_109959 ENSG00000233215 LINC01687 - long intergenic non-protein coding RNA 1687 ncRNA chr20-4318 chr20 52056593 52056803 + 7.78 0.000 Intergenic Intergenic 48786 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr7-8553 chr7 56617839 56618049 + 7.78 0.000 Intergenic BSR/Beta|Satellite|Satellite -79814 NR_108099 101928401 Hs.385614 NR_108099 ENSG00000233288 LOC101928401 - uncharacterized LOC101928401 ncRNA chr11-6970 chr11 114918699 114918909 + 7.78 0.000 Intergenic Intergenic 240277 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr12-7491 chr12 66873203 66873413 + 7.78 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -69039 NM_001366724 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr19-5113 chr19 57338834 57339044 + 7.78 0.000 Intergenic Intergenic -12335 NM_001329456 57343 Hs.287374 NM_020657 ENSG00000131845 ZNF304 - zinc finger protein 304 protein-coding chr6-7637 chr6 80173250 80173460 + 7.78 0.000 intron (NR_134945, intron 7 of 10) intron (NR_134945, intron 7 of 10) 66684 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr13-3930 chr13 58988925 58989135 + 7.78 0.000 Intergenic Intergenic -755913 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr6-3414 chr6 104880826 104881036 + 7.78 0.000 Intergenic L1MEb|LINE|L1 -21012 NR_146788 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr1-16646 chr1 240345100 240345310 + 7.78 0.000 intron (NM_001348094, intron 11 of 14) intron (NM_001348094, intron 11 of 14) 253322 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr7-4777 chr7 78663065 78663275 + 7.78 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) 315928 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr18-2963 chr18 22314508 22314718 + 7.78 0.000 Intergenic Intergenic 103302 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T cell lymphoma-associated antigen 1 protein-coding chr3-2744 chr3 134483468 134483678 + 7.78 0.000 intron (NM_015391, intron 1 of 2) intron (NM_015391, intron 1 of 2) -2151 NM_001042383 80254 Hs.443301 NM_025180 ENSG00000182923 CEP63 SCKL6 centrosomal protein 63 protein-coding chr2-13510 chr2 150607542 150607752 + 7.78 0.000 Intergenic MamGypLTR3|LTR|Gypsy -21250 NR_110245 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr5-7621 chr5 45575709 45575919 + 7.78 0.000 intron (NM_021072, intron 2 of 7) Tigger1|DNA|TcMar-Tigger 120566 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr13-2794 chr13 101382589 101382799 + 7.78 0.000 intron (NM_001350749, intron 3 of 43) intron (NM_001350749, intron 3 of 43) 33814 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chrX-2869 chrX 143716517 143716727 + 7.78 0.000 intron (NM_001009615, intron 1 of 1) LTR46-int|LTR|ERV1 4046 NM_001009615 494119 NM_001009615 ENSG00000268988 SPANXN2 CT11.7|SPANX-N2 SPANX family member N2 protein-coding chr5-7982 chr5 83899869 83900079 + 7.78 0.000 Intergenic Intergenic -179119 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr14-4435 chr14 32785471 32785681 + 7.78 0.000 intron (NM_004274, intron 12 of 13) intron (NM_004274, intron 12 of 13) -153303 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr3-5640 chr3 10973266 10973476 + 7.78 0.000 Intergenic Intergenic -19363 NM_001348250 6529 Hs.443874 NM_003042 ENSG00000157103 SLC6A1 GABATHG|GABATR|GAT1|MAE solute carrier family 6 member 1 protein-coding chr2-4960 chr2 187266260 187266470 + 7.78 0.000 Intergenic L1MB3|LINE|L1 181887 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr15-3453 chr15 92385289 92385499 + 7.78 0.000 Intergenic Intergenic -8487 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr9-4232 chr9 78409860 78410070 + 7.78 0.000 Intergenic LTR12C|LTR|ERV1 112840 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr1-12563 chr1 29731220 29731430 + 7.78 0.000 Intergenic Intergenic 306287 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr2-11271 chr2 179340738 179340948 + 7.78 0.000 Intergenic MER5A1|DNA|hAT-Charlie -76011 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr18-1983 chr18 39794165 39794375 + 7.78 0.000 Intergenic Intergenic -42275 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 MIR924HG LINC00669 MIR924 host gene ncRNA chr12-8342 chr12 131634261 131634471 + 7.78 0.000 Intergenic Intergenic 13755 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr4-7071 chr4 31043676 31043886 + 7.78 0.000 intron (NM_001173523, intron 2 of 2) L1P3|LINE|L1 -127363 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA chr22-3554 chr22 17379170 17379380 + 7.78 0.000 intron (NM_001290047, intron 1 of 18) intron (NM_001290047, intron 1 of 18) 9815 NM_001290047 27443 Hs.231895 NM_031413 ENSG00000099954 CECR2 - CECR2 histone acetyl-lysine reader protein-coding chr20-897 chr20 40926365 40926575 + 7.78 0.000 Intergenic Intergenic -54243 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr4-2982 chr4 118396006 118396216 + 7.78 0.000 Intergenic MIR|SINE|MIR -43108 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr7-9612 chr7 149321254 149321464 + 7.78 0.000 Intergenic Intergenic 36078 NR_036573 155060 Hs.490512 NR_015357 ENSG00000244560 LOC155060 - AI894139 pseudogene pseudo chr3-11153 chr3 189221592 189221802 + 7.78 0.000 intron (NM_198485, intron 3 of 5) intron (NM_198485, intron 3 of 5) 18897 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr12-4724 chr12 51000332 51000542 + 7.78 0.000 intron (NR_033422, intron 5 of 17) intron (NR_033422, intron 5 of 17) 8778 NM_001174130 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr2-13520 chr2 151244434 151244644 + 7.78 0.000 Intergenic Intergenic 17324 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr5-4449 chr5 5071336 5071546 + 7.78 0.000 intron (NR_134266, intron 1 of 1) LTR16D2|LTR|ERVL 6870 NR_134266 105374631 Hs.570964 NR_134266 ENSG00000250529 LINC02121 - long intergenic non-protein coding RNA 2121 ncRNA chr12-3097 chr12 19841526 19841736 + 7.78 0.000 Intergenic L2c|LINE|L2 -173054 NR_040098 100506393 Hs.658356 NR_040098 ENSG00000256287 LINC02398 - long intergenic non-protein coding RNA 2398 ncRNA chr4-4104 chr4 6184236 6184446 + 7.78 0.000 intron (NM_144720, intron 1 of 12) intron (NM_144720, intron 1 of 12) 10278 NM_001306134 152789 Hs.479066 NM_144720 ENSG00000152969 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding chr2-9124 chr2 207655151 207655361 + 7.78 0.000 Intergenic Intergenic -7128 NR_135566 102724714 Hs.443475 NR_135566 ENSG00000224137 LINC01857 - long intergenic non-protein coding RNA 1857 ncRNA chr8-3287 chr8 22732997 22733207 + 7.78 0.000 intron (NM_001363233, intron 4 of 6) intron (NM_001363233, intron 4 of 6) -39622 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr4-5825 chr4 101009732 101009942 + 7.78 0.000 Intergenic LTR16E1|LTR|ERVL 231035 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr2-9467 chr2 235133143 235133353 + 7.78 0.000 Intergenic AluJb|SINE|Alu 105513 NM_001371306 chr4-8136 chr4 127404284 127404494 + 7.78 0.000 Intergenic LTR33|LTR|ERVL -228568 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr15-3614 chr15 68258708 68258918 + 7.78 0.000 Intergenic L2|LINE|L2 -18932 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr21-1347 chr21 33139844 33140054 + 7.78 0.000 Intergenic Intergenic -16249 NR_109961 101928107 Hs.382669 NR_109961 ENSG00000226527 LOC101928107 - uncharacterized LOC101928107 ncRNA chr10-6406 chr10 7769642 7769852 + 7.78 0.000 intron (NM_012311, intron 7 of 12) MIRb|SINE|MIR 18246 NM_012311 22944 Hs.397918 NM_012311 ENSG00000151657 KIN BTCD|KIN17|Rts2 Kin17 DNA and RNA binding protein protein-coding chr3-7916 chr3 140816659 140816869 + 7.78 0.000 Intergenic MER66B|LTR|ERV1 -125072 NM_001104647 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr8-2507 chr8 19665306 19665516 + 7.78 0.000 intron (NR_148898, intron 1 of 9) intron (NR_148898, intron 1 of 9) 17172 NM_018371 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr7-5290 chr7 24102744 24102954 + 7.78 0.000 Intergenic Intergenic -181341 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr4-8602 chr4 170534846 170535056 + 7.78 0.000 Intergenic L2a|LINE|L2 208784 NR_134683 100506107 Hs.380602 NR_134683 ENSG00000250968 LINC02382 - long intergenic non-protein coding RNA 2382 ncRNA chr16-6207 chr16 27853051 27853261 + 7.78 0.000 intron (NM_001323901, intron 2 of 5) intron (NM_001323901, intron 2 of 5) 35001 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr4-3865 chr4 133916058 133916268 + 7.78 0.000 Intergenic L1PA8|LINE|L1 285626 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr12-6657 chr12 1170612 1170822 + 7.78 0.000 intron (NR_027948, intron 7 of 19) intron (NR_027948, intron 7 of 19) 142969 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr10-8120 chr10 69703414 69703624 + 7.78 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 73272 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr5-8704 chr5 142431511 142431721 + 7.78 0.000 intron (NR_120664, intron 3 of 3) AluSc|SINE|Alu 106323 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr9-6674 chr9 135729460 135729670 + 7.78 0.000 intron (NM_020822, intron 2 of 30) MLT1E2|LTR|ERVL-MaLR 27380 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr7-9245 chr7 121873727 121873937 + 7.78 0.000 intron (NM_001206839, intron 1 of 28) intron (NM_001206839, intron 1 of 28) 671 NM_001369396 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr12-3232 chr12 57381793 57382003 + 7.78 0.000 intron (NM_001351217, intron 1 of 21) AluJb|SINE|Alu -39442 NM_001351214 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr2-12021 chr2 28759060 28759270 + 7.78 0.000 intron (NM_206876, intron 2 of 8) Tigger3b|DNA|TcMar-Tigger 7335 NM_002709 5500 Hs.702907 NM_002709 ENSG00000213639 PPP1CB HEL-S-80p|NSLH2|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1 catalytic subunit beta protein-coding chr9-5050 chr9 32003842 32004052 + 7.78 0.000 Intergenic Helitron1Na_Mam|RC|Helitron -380656 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr20-4372 chr20 56921751 56921961 + 7.78 0.000 Intergenic MIR|SINE|MIR -291840 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr1-13700 chr1 14215424 14215634 + 7.78 0.000 Intergenic Intergenic 204444 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr8-2772 chr8 117988765 117988975 + 7.78 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -67957 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr7-9723 chr7 156903666 156903876 + 7.78 0.000 Intergenic Intergenic -10563 NR_146959 64327 Hs.209989 NM_022458 ENSG00000105983 LMBR1 ACHP|C7orf2|DIF14|LSS|PPD2|THYP|TPT|ZRS limb development membrane protein 1 protein-coding chr4-4701 chr4 87575366 87575576 + 7.78 0.000 Intergenic Intergenic -33058 NM_014208 1834 Hs.678914 NM_014208 ENSG00000152591 DSPP DFNA39|DGI1|DMP3|DPP|DSP dentin sialophosphoprotein protein-coding chr6-7259 chr6 42418836 42419046 + 7.78 0.000 intron (NM_001297573, intron 2 of 17) intron (NM_001297573, intron 2 of 17) 33110 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr9-5853 chr9 130418778 130418988 + 7.78 0.000 exon (NM_001291815, exon 86 of 98) exon (NM_001291815, exon 86 of 98) -25824 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr1-9362 chr1 29654087 29654297 + 7.78 0.000 Intergenic LTR33|LTR|ERVL -304078 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr8-4042 chr8 61467545 61467755 + 7.78 0.000 intron (NM_173519, intron 5 of 5) intron (NM_173519, intron 5 of 5) 179680 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr3-6691 chr3 131962266 131962476 + 7.78 0.000 intron (NM_001289112, intron 1 of 15) intron (NM_001289112, intron 1 of 15) 23560 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr2-6012 chr2 86386802 86387012 + 7.78 0.000 Intergenic L1MC1|LINE|L1 -48824 NM_001164730 65055 Hs.368884 NM_022912 ENSG00000068615 REEP1 C2orf23|HMN5B|SPG31|Yip2a receptor accessory protein 1 protein-coding chr13-4082 chr13 77310913 77311123 + 7.78 0.000 intron (NM_015057, intron 1 of 82) L1MEf|LINE|L1 16076 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr1-13772 chr1 17091902 17092112 + 7.78 0.000 intron (NM_007365, intron 6 of 15) intron (NM_007365, intron 6 of 15) 27444 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr13-1674 chr13 75871365 75871575 + 7.78 0.000 intron (NM_001257995, intron 1 of 3) L2a|LINE|L2 432 NM_001257995 729420 Hs.586820 NM_001257995 LMO7DN C13orf45 LMO7 downstream neighbor protein-coding chr2-6852 chr2 72676586 72676796 + 7.78 0.000 intron (NR_135774, intron 6 of 19) intron (NR_135774, intron 6 of 19) 149342 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr18-1640 chr18 56066544 56066754 + 7.78 0.000 intron (NR_148972, intron 3 of 8) intron (NR_148972, intron 3 of 8) 24371 NR_146510 102724698 NR_146510 ENSG00000267057 LINC01905 - long intergenic non-protein coding RNA 1905 ncRNA chr7-9603 chr7 148897392 148897602 + 7.78 0.000 Intergenic Intergenic -13148 NM_004456 2146 Hs.444082 NM_004456 ENSG00000106462 EZH2 ENX-1|ENX1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding chr4-7095 chr4 33134139 33134349 + 7.78 0.000 Intergenic MLT2D|LTR|ERVL 783206 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr5-1706 chr5 115170119 115170329 + 7.78 0.000 promoter-TSS (NM_001300759) promoter-TSS (NM_001300759) -316 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr22-1622 chr22 30488016 30488226 + 7.78 0.000 TTS (NM_174977) TTS (NM_174977) -6365 NR_001580 376844 Hs.534651 NR_001580 SDC4P - syndecan 4 pseudogene pseudo chr8-2885 chr8 142074504 142074714 + 7.78 0.000 Intergenic Intergenic -101730 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr7-9487 chr7 136288253 136288463 + 7.78 0.000 Intergenic Intergenic -310999 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr3-11134 chr3 187666192 187666402 + 7.78 0.000 Intergenic Intergenic 4097 NM_001048 6750 Hs.12409 NM_001048 ENSG00000157005 SST SMST somatostatin protein-coding chr3-6685 chr3 131557804 131558014 + 7.78 0.000 intron (NM_130808, intron 11 of 15) intron (NM_130808, intron 11 of 15) -54938 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr20-509 chr20 63496802 63497012 + 7.78 0.000 intron (NM_001958, intron 2 of 7) intron (NM_001958, intron 2 of 7) 2176 NM_001958 1917 Hs.433839 NM_001958 ENSG00000101210 EEF1A2 EEF1AL|EF-1-alpha-2|EF1A|EIEE33|HS1|MRD38|STN|STNL eukaryotic translation elongation factor 1 alpha 2 protein-coding chr12-2783 chr12 59937305 59937515 + 7.78 0.000 Intergenic Intergenic 248040 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr19-4050 chr19 6498093 6498303 + 7.78 0.000 intron (NM_006087, intron 3 of 3) AluY|SINE|Alu 4111 NM_006087 10382 Hs.110837 NM_006087 ENSG00000104833 TUBB4A DYT4|TUBB4|beta-5 tubulin beta 4A class IVa protein-coding chr4-8591 chr4 169765883 169766093 + 7.78 0.000 Intergenic Intergenic -8044 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr1-8895 chr1 5983501 5983711 + 7.78 0.000 intron (NR_111987, intron 2 of 32) MER68|LTR|ERVL 8819 NM_001291593 261734 Hs.462348 NM_015102 ENSG00000131697 NPHP4 POC10|SLSN4 nephrocystin 4 protein-coding chr5-7784 chr5 63653761 63653971 + 7.78 0.000 Intergenic Intergenic 308426 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr4-2996 chr4 121574059 121574269 + 7.78 0.000 Intergenic Intergenic 122816 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr3-7372 chr3 60780323 60780533 + 7.78 0.000 intron (NR_148921, intron 4 of 4) MER61-int|LTR|ERV1 -162558 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr3-8107 chr3 17138926 17139136 + 7.78 0.000 Intergenic LTR16C|LTR|ERVL 205835 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr5-4343 chr5 164546916 164547126 + 7.78 0.000 Intergenic L1PA5|LINE|L1 76742 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr4-8552 chr4 165598320 165598530 + 7.78 0.000 Intergenic MIR|SINE|MIR -86214 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr14-2538 chr14 21891634 21891844 + 7.78 0.000 Intergenic Intergenic -220722 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr11-9819 chr11 71506460 71506670 + 7.78 0.000 Intergenic Intergenic -20702 NM_001012503 440050 Hs.710675 NM_001012503 ENSG00000244411 KRTAP5-7 KRTAP5-3|KRTAP5.7 keratin associated protein 5-7 protein-coding chr6-5295 chr6 141674342 141674552 + 7.78 0.000 Intergenic Intergenic 414352 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr1-14343 chr1 40739792 40740002 + 7.78 0.000 intron (NM_001142589, intron 2 of 8) L2c|LINE|L2 1061 NM_001308114 4802 Hs.713051 NM_014223 ENSG00000066136 NFYC CBF-C|CBFC|H1TF2A|HAP5|HSM|NF-YC nuclear transcription factor Y subunit gamma protein-coding chr4-2955 chr4 106476723 106476933 + 7.78 0.000 Intergenic Intergenic 43204 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA chr2-7114 chr2 180483136 180483346 + 7.78 0.000 Intergenic L2b|LINE|L2 -208863 NR_104321 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr7-4016 chr7 148664462 148664672 + 7.78 0.000 Intergenic Intergenic -33189 NM_001370660 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr9-5285 chr9 83409647 83409857 + 7.78 0.000 intron (NM_174938, intron 1 of 13) MIRb|SINE|MIR 57990 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr5-5564 chr5 149113724 149113934 + 7.78 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -27618 NM_001345859 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr1-14834 chr1 75700141 75700351 + 7.78 0.000 Intergenic L1PA4|LINE|L1 -24101 NM_001286044 34 Hs.445040 NM_000016 ENSG00000117054 ACADM ACAD1|MCAD|MCADH acyl-CoA dehydrogenase medium chain protein-coding chr5-8873 chr5 154640258 154640468 + 7.78 0.000 Intergenic HERVK-int|LTR|ERVK -42616 NM_001367713 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr7-6624 chr7 111112997 111113207 + 7.78 0.000 intron (NM_001099658, intron 2 of 2) intron (NM_001099658, intron 2 of 2) 21975 NM_018334 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr11-6776 chr11 86882794 86883004 + 7.78 0.000 intron (NR_120592, intron 2 of 2) L1PA12|LINE|L1 -24945 NR_045004 8587 Hs.741959 NR_045004 ENSG00000255203 OR7E2P OR11-6|OR7E143P|OR7E51P|OR7E52P|OR7F2P|OST245|hg94 olfactory receptor family 7 subfamily E member 2 pseudogene pseudo chr11-6976 chr11 115752073 115752283 + 7.78 0.000 Intergenic Intergenic 8022 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr8-7208 chr8 126367116 126367326 + 7.78 0.000 Intergenic MER33|DNA|hAT-Charlie 41726 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA chr1-9446 chr1 34504832 34505042 + 7.78 0.000 Intergenic L1PB4|LINE|L1 164757 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr6-7824 chr6 101570503 101570713 + 7.78 0.000 intron (NM_001166247, intron 1 of 16) intron (NM_001166247, intron 1 of 16) 171623 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr11-8147 chr11 58968388 58968598 + 7.78 0.000 intron (NR_033853, intron 5 of 5) intron (NR_033853, intron 5 of 5) 25244 NM_080661 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr1-16622 chr1 239111886 239112096 + 7.78 0.000 Intergenic Intergenic -274577 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr17-5279 chr17 20771329 20771539 + 7.78 0.000 Intergenic Intergenic 58988 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr5-7770 chr5 62082311 62082521 + 7.78 0.000 Intergenic Intergenic -223746 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr14-4004 chr14 37744506 37744716 + 7.78 0.000 intron (NM_001310135, intron 12 of 32) L2a|LINE|L2 -27772 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr10-3862 chr10 28779517 28779727 + 7.78 0.000 intron (NR_120652, intron 2 of 3) (AT)n|Simple_repeat|Simple_repeat 16428 NR_038375 100507605 Hs.119207 NR_038374 ENSG00000235824 LINC00837 - long intergenic non-protein coding RNA 837 ncRNA chr12-1632 chr12 118061070 118061280 + 7.78 0.000 promoter-TSS (NM_018639) promoter-TSS (NM_018639) 36 NM_001278558 55884 Hs.506985 NM_018639 ENSG00000176871 WSB2 SBA2 WD repeat and SOCS box containing 2 protein-coding chr1-10180 chr1 110539829 110540039 + 7.78 0.000 Intergenic Intergenic -20759 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr11-6763 chr11 85271101 85271311 + 7.78 0.000 intron (NM_001142699, intron 4 of 27) THE1B-int|LTR|ERVL-MaLR -347785 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr11-6461 chr11 67077456 67077666 + 7.78 0.000 Intergenic L2c|LINE|L2 20714 NM_001300886 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr19-4241 chr19 50810833 50811043 + 7.78 0.000 Intergenic Intergenic -6085 NM_001290149 84798 Hs.256301 NM_032712 ENSG00000167747 C19orf48 - chromosome 19 open reading frame 48 protein-coding chr2-9666 chr2 29165380 29165590 + 7.78 0.000 intron (NM_001287528, intron 13 of 14) MIR|SINE|MIR 50070 NM_001287527 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr12-4922 chr12 68189901 68190111 + 7.78 0.000 Intergenic Intergenic -30266 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr12-5005 chr12 80628018 80628228 + 7.78 0.000 intron (NM_001145026, intron 33 of 44) intron (NM_001145026, intron 33 of 44) -79511 NM_002469 4618 Hs.35937 NM_002469 ENSG00000111046 MYF6 CNM3|MRF4|bHLHc4|myf-6 myogenic factor 6 protein-coding chr14-3461 chr14 101107843 101108053 + 7.78 0.000 Intergenic Tigger5|DNA|TcMar-Tigger -12908 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr1-13052 chr1 173616930 173617140 + 7.78 0.000 intron (NM_198493, intron 5 of 5) L1PA11|LINE|L1 -13963 NM_178527 284525 Hs.494981 NM_178527 ENSG00000162753 SLC9C2 SLC9A11 solute carrier family 9 member C2 (putative) protein-coding chr11-7572 chr11 31555040 31555250 + 7.78 0.000 intron (NM_001288725, intron 3 of 10) intron (NM_001288725, intron 3 of 10) 45378 NM_019040 26610 Hs.175534 NM_019040 ENSG00000109911 ELP4 AN|AN2|C11orf19|PAX6NEB|PAXNEB|dJ68P15A.1|hELP4 elongator acetyltransferase complex subunit 4 protein-coding chr16-2368 chr16 57953522 57953732 + 7.78 0.000 intron (NM_001297, intron 12 of 32) intron (NM_001297, intron 12 of 32) 17501 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chrX-4734 chrX 91449255 91449465 + 7.78 0.000 Intergenic L1ME3|LINE|L1 -14361 NR_110659 102724167 Hs.571694 NR_110659 ENSG00000234161 PABPC5-AS1 CXorf46 PABPC5 antisense RNA 1 ncRNA chr14-5140 chr14 90594097 90594307 + 7.78 0.000 intron (NM_001010854, intron 17 of 19) intron (NM_001010854, intron 17 of 19) -48427 NR_110134 101928909 Hs.662545 NR_110134 ENSG00000259163 LOC101928909 - uncharacterized LOC101928909 ncRNA chr10-7641 chr10 24561417 24561627 + 7.78 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 61321 NR_160024 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding KI270722.1-3 KI270722.1 167374 167584 + 7.78 0.000 NA NA NA NA chr4-5878 chr4 127550539 127550749 + 7.78 0.000 Intergenic LTR81B|LTR|Gypsy -82313 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr3-10231 chr3 122655707 122655917 + 7.78 0.000 Intergenic L1PA6|LINE|L1 -25027 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr11-5442 chr11 71910040 71910250 + 7.78 0.000 intron (NR_029192, intron 6 of 6) HERVE-int|LTR|ERV1 18302 NR_029192 100133315 Hs.150324 NR_029192 LOC100133315 - transient receptor potential cation channel, subfamily C, member 2-like pseudo chr17-8217 chr17 64046281 64046491 + 7.78 0.000 intron (NM_001433, intron 19 of 21) intron (NM_001433, intron 19 of 21) -25752 NM_001099788 3384 Hs.431460 NM_000873 ENSG00000108622 ICAM2 CD102 intercellular adhesion molecule 2 protein-coding chr11-3876 chr11 86692510 86692720 + 7.78 0.000 Intergenic LTR37-int|LTR|ERV1 -19979 NR_147829 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr3-8437 chr3 115874403 115874613 + 7.78 0.000 intron (NM_001318915, intron 3 of 8) L2c|LINE|L2 30618 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr2-14613 chr2 234071076 234071286 + 7.78 0.000 intron (NM_006944, intron 7 of 7) L2b|LINE|L2 20479 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr15-2581 chr15 58997231 58997441 + 7.78 0.000 intron (NM_001270530, intron 1 of 13) Charlie1a|DNA|hAT-Charlie 9190 NM_001270530 54778 Hs.404423 NM_017610 ENSG00000157450 RNF111 ARK|hRNF111 ring finger protein 111 protein-coding chr3-11263 chr3 198045635 198045845 + 7.78 0.000 Intergenic Intergenic -6273 NR_046669 100873947 Hs.637166 NR_046669 ENSG00000232832 LMLN-AS1 - LMLN antisense RNA 1 ncRNA chr9-7054 chr9 123999245 123999455 + 7.78 0.000 Intergenic Intergenic 10046 NR_135129 100505588 Hs.547168 NR_135129 ENSG00000236668 LOC100505588 - uncharacterized LOC100505588 ncRNA chr12-3357 chr12 93108735 93108945 + 7.78 0.000 intron (NR_040096, intron 3 of 4) L2|LINE|L2 -65526 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr3-10284 chr3 125120013 125120223 + 7.78 0.000 intron (NM_001195483, intron 6 of 12) MIR|SINE|MIR 31434 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr2-6584 chr2 230701695 230701905 + 7.78 0.000 Intergenic AluSz|SINE|Alu -1271 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr5-5677 chr5 160228435 160228645 + 7.78 0.000 promoter-TSS (NM_001445) promoter-TSS (NM_001445) -966 NM_001445 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr15-2983 chr15 52204561 52204771 + 7.78 0.000 intron (NM_018728, intron 38 of 40) intron (NM_018728, intron 38 of 40) -13274 NM_016194 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr10-3854 chr10 17085128 17085338 + 7.78 0.000 intron (NM_001081, intron 16 of 66) intron (NM_001081, intron 16 of 66) 44584 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr5-3550 chr5 39661361 39661571 + 7.78 0.000 Intergenic LOR1b|LTR|ERV1 141035 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr9-3858 chr9 131327203 131327413 + 7.78 0.000 Intergenic L1ME4a|LINE|L1 37585 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr2-7548 chr2 23553581 23553791 + 7.78 0.000 intron (NM_052920, intron 2 of 13) MER96|DNA|hAT-Tip100 168507 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2-10388 chr2 177634375 177634585 + 7.78 0.000 intron (NM_001077197, intron 20 of 20) AluY|SINE|Alu -15738 NM_152275 92104 Hs.128384 NM_152275 ENSG00000197557 TTC30A IFT70A|TTC30B tetratricopeptide repeat domain 30A protein-coding chr22-2544 chr22 25995599 25995809 + 7.78 0.000 intron (NM_001318245, intron 40 of 43) intron (NM_001318245, intron 40 of 43) -173758 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr5-5112 chr5 101275557 101275767 + 7.78 0.000 Intergenic Intergenic -372380 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr5-7589 chr5 42597505 42597715 + 7.78 0.000 intron (NM_001242460, intron 1 of 7) intron (NM_001242460, intron 1 of 7) 31746 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr6-4597 chr6 44061947 44062157 + 7.78 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 12600 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr10-8417 chr10 84785895 84786105 + 7.78 0.000 Intergenic L1MCb|LINE|L1 360831 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr9-7459 chr9 27384824 27385034 + 7.78 0.000 intron (NM_024761, intron 2 of 3) intron (NM_024761, intron 2 of 3) -87779 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chr17-5396 chr17 32994050 32994260 + 7.78 0.000 intron (NM_001317225, intron 1 of 4) intron (NM_001317225, intron 1 of 4) 1304 NM_001317225 124912 Hs.434112 NM_173847 ENSG00000141316 SPACA3 ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1 sperm acrosome associated 3 protein-coding chr10-4412 chr10 61997051 61997261 + 7.78 0.000 intron (NM_032199, intron 3 of 9) intron (NM_032199, intron 3 of 9) -52201 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr13-1541 chr13 28532741 28532951 + 7.78 0.000 Intergenic CpG -37718 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr9-5297 chr9 85200573 85200783 + 7.78 0.000 Intergenic Intergenic 494777 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr3-9807 chr3 73510102 73510312 + 7.78 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) -11115 NR_121660 101927296 Hs.662049 NR_121660 LOC101927296 - uncharacterized LOC101927296 ncRNA chr7-7907 chr7 6844247 6844457 + 7.78 0.000 Intergenic HERVE-int|LTR|ERV1 -18057 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr16-6482 chr16 58343565 58343775 + 7.78 0.000 Intergenic L1MB3|LINE|L1 -48623 NM_001080492 221191 Hs.411239 NM_001080492 ENSG00000103023 PRSS54 CT67|KLKBL4 serine protease 54 protein-coding chr14-2199 chr14 100777699 100777909 + 7.78 0.000 Intergenic Intergenic -36687 NR_039729 100616495 NR_039729 ENSG00000266461 MIR2392 - microRNA 2392 ncRNA chr6-8463 chr6 154594497 154594707 + 7.78 0.000 Intergenic Intergenic -83917 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr16-4655 chr16 75394076 75394286 + 7.78 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) 39322 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr14-1070 chr14 100855295 100855505 + 7.78 0.000 intron (NR_033360, intron 6 of 6) intron (NR_033360, intron 6 of 6) 3010 NR_030528 768222 NR_030528 ENSG00000211574 MIR770 MIRN770|hsa-mir-770 microRNA 770 ncRNA chr3-4990 chr3 18134594 18134804 + 7.78 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 172147 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr11-6940 chr11 111230394 111230604 + 7.78 0.000 Intergenic Intergenic -15226 NM_198498 341032 Hs.298685 NM_198498 ENSG00000150750 C11orf53 - chromosome 11 open reading frame 53 protein-coding chr13-3349 chr13 73666386 73666596 + 7.78 0.000 Intergenic L1ME3Cz|LINE|L1 102247 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr4-7879 chr4 104635239 104635449 + 7.78 0.000 intron (NR_125926, intron 1 of 9) AluJr4|SINE|Alu -140450 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr13-3421 chr13 99427633 99427843 + 7.78 0.000 Intergenic L1MB8|LINE|L1 71568 NR_110731 102725509 Hs.648968 NR_110731 LINC01232 TCONS_00021520 long intergenic non-protein coding RNA 1232 ncRNA chr19-4759 chr19 29864031 29864241 + 7.78 0.000 Intergenic Intergenic 52145 NM_001322262 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr12-4687 chr12 48600418 48600628 + 7.78 0.000 Intergenic HERVIP10F-int|LTR|ERV1 -30477 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr1-14603 chr1 54429225 54429435 + 7.78 0.000 Intergenic Intergenic -22936 NM_018070 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr2-13135 chr2 118016390 118016600 + 7.78 0.000 Intergenic 7SLRNA|srpRNA|srpRNA -2425 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr5-4237 chr5 133827426 133827636 + 7.78 0.000 Intergenic Intergenic -86146 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr19-6430 chr19 15510494 15510704 + 7.78 0.000 intron (NM_173483, intron 1 of 13) intron (NM_173483, intron 1 of 13) 2074 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr7-5427 chr7 36514309 36514519 + 7.78 0.000 intron (NM_001177507, intron 19 of 19) intron (NM_001177507, intron 19 of 19) 85706 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr22-2692 chr22 37396480 37396690 + 7.78 0.000 intron (NM_052906, intron 2 of 2) MIR3|SINE|MIR 30885 NR_110512 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr4-6717 chr4 3868953 3869163 + 7.78 0.000 Intergenic Intergenic 86370 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr15-1688 chr15 60398110 60398320 + 7.78 0.000 promoter-TSS (NM_004039) promoter-TSS (NM_004039) -229 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr8-6799 chr8 95499734 95499944 + 7.78 0.000 intron (NR_038207, intron 2 of 2) L1P3|LINE|L1 -230638 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr2-7669 chr2 29231864 29232074 + 7.78 0.000 intron (NM_004304, intron 15 of 28) intron (NM_004304, intron 15 of 28) -8069 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr6-4444 chr6 34358747 34358957 + 7.78 0.000 intron (NM_001202470, intron 5 of 8) intron (NM_001202470, intron 5 of 8) 33817 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr3-8163 chr3 34212902 34213112 + 7.78 0.000 Intergenic Intergenic 414377 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr21-1098 chr21 34285247 34285457 + 7.78 0.000 Intergenic ERVL-B4-int|LTR|ERVL -78672 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr10-8185 chr10 71538998 71539208 + 7.78 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -27183 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr20-4000 chr20 36198718 36198928 + 7.78 0.000 intron (NM_001258330, intron 14 of 20) MIR|SINE|MIR -37594 NM_015511 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr8-5038 chr8 23192366 23192576 + 7.78 0.000 intron (NM_003844, intron 9 of 9) intron (NM_003844, intron 9 of 9) -28444 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr17-5719 chr17 57258357 57258567 + 7.78 0.000 intron (NM_001322250, intron 4 of 13) intron (NM_001322250, intron 4 of 13) 1443 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr20-2025 chr20 63161907 63162117 + 7.78 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -16488 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA chr11-10032 chr11 82389354 82389564 + 7.78 0.000 intron (NR_120571, intron 1 of 7) L1MEf|LINE|L1 14454 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr5-8011 chr5 87600644 87600854 + 7.78 0.000 Intergenic L1PREC2|LINE|L1 -61293 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr13-3436 chr13 103190174 103190384 + 7.78 0.000 Intergenic Intergenic -123862 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chrX-4149 chrX 30311607 30311817 + 7.78 0.000 Intergenic Intergenic -2322 NM_000475 190 Hs.268490 NM_000475 ENSG00000169297 NR0B1 AHC|AHCH|AHX|DAX-1|DAX1|DSS|GTD|HHG|NROB1|SRXY2 nuclear receptor subfamily 0 group B member 1 protein-coding chrX-2982 chrX 35380934 35381144 + 7.78 0.000 Intergenic L1PA15-16|LINE|L1 -417303 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr12-7605 chr12 78967228 78967438 + 7.78 0.000 intron (NM_001291901, intron 1 of 9) intron (NM_001291901, intron 1 of 9) -78359 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr5-3065 chr5 33650970 33651180 + 7.78 0.000 intron (NM_001324512, intron 7 of 21) intron (NM_001324512, intron 7 of 21) 210299 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr13-2746 chr13 97817647 97817857 + 7.78 0.000 Intergenic Intergenic -135923 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr8-4570 chr8 127571047 127571257 + 7.78 0.000 Intergenic L2c|LINE|L2 -89013 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr5-2397 chr5 101097934 101098144 + 7.78 0.000 Intergenic L1MB5|LINE|L1 -194757 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr8-5930 chr8 18868446 18868656 + 7.78 0.000 intron (NM_015310, intron 3 of 15) intron (NM_015310, intron 3 of 15) 18506 NM_001362819 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr17-2266 chr17 18936802 18937012 + 7.78 0.000 Intergenic AluSz|SINE|Alu -13769 NM_001282417 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr5-5561 chr5 148730971 148731181 + 7.78 0.000 Intergenic Intergenic -76549 NR_104445 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr15-2347 chr15 35375806 35376016 + 7.78 0.000 intron (NM_080650, intron 7 of 8) intron (NM_080650, intron 7 of 8) -3547 NR_037507 100500904 NR_037507 ENSG00000265102 MIR3942 - microRNA 3942 ncRNA chr7-7236 chr7 25389733 25389943 + 7.78 0.000 Intergenic Intergenic -161352 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr8-7054 chr8 114373149 114373359 + 7.78 0.000 Intergenic LTR16|LTR|ERVL -936315 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr14-2180 chr14 97912597 97912807 + 7.78 0.000 Intergenic Intergenic 65422 NR_152749 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr12-6761 chr12 7342753 7342963 + 7.78 0.000 Intergenic Intergenic 38526 NM_001080454 341392 Hs.450804 NM_001080454 ENSG00000215009 ACSM4 - acyl-CoA synthetase medium chain family member 4 protein-coding chr3-4828 chr3 141095179 141095389 + 7.78 0.000 intron (NM_080862, intron 2 of 2) CpG 43937 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr4-5757 chr4 60999596 60999806 + 7.78 0.000 Intergenic L1M3d|LINE|L1 77082 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr8-6650 chr8 79216678 79216888 + 7.78 0.000 Intergenic Intergenic -115405 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA chr4-5289 chr4 176401023 176401233 + 7.78 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 81162 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr14-4788 chr14 65111702 65111912 + 7.78 0.000 Intergenic Intergenic -9112 NR_073137 4149 Hs.285354 NM_002382 ENSG00000125952 MAX bHLHd4 MYC associated factor X protein-coding chr8-1483 chr8 37851471 37851681 + 7.78 0.000 Intergenic Intergenic -1715 NM_018310 55290 Hs.709301 NM_018310 ENSG00000104221 BRF2 BRFU|TFIIIB50 BRF2 RNA polymerase III transcription initiation factor subunit protein-coding chr8-3443 chr8 84969846 84970056 + 7.78 0.000 Intergenic LTR16B2|LTR|ERVL -137287 NM_033402 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chr2-11553 chr2 241298596 241298806 + 7.78 0.000 intron (NM_005336, intron 1 of 27) L1MC4|LINE|L1 -16486 NM_001349315 4735 Hs.721234 NM_004404 ENSG00000168385 SEPTIN2 DIFF6|NEDD-5|NEDD5|Pnutl3|SEPT2|hNedd5 septin 2 protein-coding chr14-3226 chr14 74809589 74809799 + 7.78 0.000 exon (NM_019589, exon 7 of 21) exon (NM_019589, exon 7 of 21) 46378 NM_019589 56252 Hs.531111 NM_019589 ENSG00000119596 YLPM1 C14orf170|PPP1R169|ZAP113|ZAP3 YLP motif containing 1 protein-coding chr10-5637 chr10 96729120 96729330 + 7.78 0.000 Intergenic L1MEa|LINE|L1 -8711 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr7-5526 chr7 44971080 44971290 + 7.78 0.000 intron (NM_033054, intron 7 of 21) intron (NM_033054, intron 7 of 21) 7830 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr11-8015 chr11 14208322 14208532 + 7.78 0.000 intron (NM_006108, intron 6 of 15) intron (NM_006108, intron 6 of 15) 150058 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr22-3986 chr22 38614871 38615081 + 7.78 0.000 intron (NM_001013647, intron 11 of 16) MIRb|SINE|MIR 41416 NM_001013647 646851 Hs.542707 NM_001013647 ENSG00000184949 FAM227A - family with sequence similarity 227 member A protein-coding chr14-3040 chr14 58572057 58572267 + 7.78 0.000 Intergenic Intergenic -61906 NR_046093 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr5-5652 chr5 157972233 157972443 + 7.78 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -113193 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr12-3846 chr12 98846391 98846601 + 7.78 0.000 intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) 48278 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr1-12393 chr1 9031031 9031241 + 7.78 0.000 Intergenic MER52D|LTR|ERV1 -4791 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr2-3937 chr2 61550687 61550897 + 7.78 0.000 Intergenic Intergenic -12436 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr9-5203 chr9 72827772 72827982 + 7.78 0.000 intron (NM_138691, intron 21 of 23) intron (NM_138691, intron 21 of 23) 46232 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr10-9126 chr10 127501040 127501250 + 7.78 0.000 Intergenic Intergenic -48204 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr2-14430 chr2 222109258 222109468 + 7.78 0.000 Intergenic Intergenic -188784 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr17-5709 chr17 55860394 55860604 + 7.78 0.000 Intergenic MER58B|DNA|hAT-Charlie 109394 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr4-3663 chr4 28791325 28791535 + 7.78 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -28152 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr8-7059 chr8 115477741 115477951 + 7.78 0.000 intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 190167 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8-6691 chr8 82400591 82400801 + 7.78 0.000 Intergenic AluSz|SINE|Alu -511408 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr11-9256 chr11 43419430 43419640 + 7.78 0.000 intron (NM_018259, intron 16 of 23) intron (NM_018259, intron 16 of 23) 60615 NM_018259 55761 Hs.191186 NM_018259 ENSG00000052841 TTC17 - tetratricopeptide repeat domain 17 protein-coding chrX-4519 chrX 66645896 66646106 + 7.78 0.000 Intergenic L1PA5|LINE|L1 -6703 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr12-4999 chr12 79462146 79462356 + 7.78 0.000 Intergenic SATR2|Satellite|Satellite 42994 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr3-10328 chr3 127012551 127012761 + 7.78 0.000 intron (NM_032242, intron 9 of 30) intron (NM_032242, intron 9 of 30) 24062 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr3-5716 chr3 15893121 15893331 + 7.78 0.000 Intergenic Intergenic 19455 NR_030289 693148 NR_030289 ENSG00000207815 MIR563 MIRN563|hsa-mir-563 microRNA 563 ncRNA chr12-4637 chr12 44317552 44317762 + 7.78 0.000 intron (NM_001286211, intron 6 of 6) L1PA16|LINE|L1 481576 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr10-7094 chr10 94315315 94315525 + 7.78 0.000 intron (NM_001165979, intron 27 of 31) intron (NM_001165979, intron 27 of 31) -28350 NR_033969 100128054 Hs.677562 NR_033969 ENSG00000268894 PLCE1-AS1 - PLCE1 antisense RNA 1 ncRNA chr8-3596 chr8 139750222 139750432 + 7.78 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -47204 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr11-10616 chr11 124962145 124962355 + 7.78 0.000 intron (NM_025004, intron 4 of 15) intron (NM_025004, intron 4 of 15) 8048 NM_025004 80071 Hs.287555 NM_025004 ENSG00000149548 CCDC15 - coiled-coil domain containing 15 protein-coding chr12-7442 chr12 61985226 61985436 + 7.78 0.000 intron (NM_178539, intron 1 of 4) intron (NM_178539, intron 1 of 4) 207508 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr5-4448 chr5 4923125 4923335 + 7.78 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -111129 NR_026994 340094 Hs.665092 NR_026994 ENSG00000215231 LINC01020 - long intergenic non-protein coding RNA 1020 ncRNA chr13-4110 chr13 79911111 79911321 + 7.78 0.000 intron (NR_120413, intron 2 of 5) intron (NR_120413, intron 2 of 5) 38630 NR_120413 101927195 Hs.342412 NR_120413 ENSG00000229175 LINC00382 TCONS_00021500 long intergenic non-protein coding RNA 382 ncRNA chr17-7570 chr17 20072749 20072959 + 7.78 0.000 intron (NM_001243439, intron 1 of 14) intron (NM_001243439, intron 1 of 14) -14168 NM_001033553 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr3-2723 chr3 106073889 106074099 + 7.78 0.000 Intergenic SVA_E|Retroposon|SVA -204593 NR_135810 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr2-13245 chr2 125793793 125794003 + 7.78 0.000 Intergenic L1MB1|LINE|L1 324087 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr1-15237 chr1 112056983 112057193 + 7.78 0.000 Intergenic Intergenic 66552 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr7-9215 chr7 117477277 117477487 + 7.78 0.000 Intergenic Intergenic -2581 NM_000492 1080 Hs.489786 NM_000492 ENSG00000001626 CFTR ABC35|ABCC7|CF|CFTR/MRP|MRP7|TNR-CFTR|dJ760C5.1 CF transmembrane conductance regulator protein-coding chr1-14082 chr1 29936759 29936969 + 7.78 0.000 Intergenic Intergenic 100748 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr2-12705 chr2 78681390 78681600 + 7.78 0.000 Intergenic L1PBb|LINE|L1 135964 NR_136312 105374820 Hs.570225 NR_136311 LOC105374820 - uncharacterized LOC105374820 ncRNA chr6-6967 chr6 18016416 18016626 + 7.78 0.000 Intergenic Intergenic -28886 NM_001105567 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr18-998 chr18 32784511 32784721 + 7.78 0.000 Intergenic AluJb|SINE|Alu -11593 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr14-2033 chr14 61667375 61667585 + 7.78 0.000 Intergenic LTR33A_|LTR|ERVL -28033 NM_001530 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr7-5452 chr7 39349356 39349566 + 7.78 0.000 intron (NM_001370959, intron 5 of 9) intron (NM_001370959, intron 5 of 9) -20327 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr8-6198 chr8 35564424 35564634 + 7.78 0.000 intron (NM_001322818, intron 2 of 16) intron (NM_001322818, intron 2 of 16) 20137 NM_001322818 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr17-7085 chr17 67649977 67650187 + 7.78 0.000 intron (NM_181671, intron 6 of 9) MER21C|LTR|ERVL -67751 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr11-7138 chr11 125943174 125943384 + 7.78 0.000 Intergenic Intergenic -2777 NM_001365077 338667 Hs.730137 NM_001365077 VSIG10L2 - V-set and immunoglobulin domain containing 10 like 2 protein-coding chr12-7958 chr12 109745281 109745491 + 7.78 0.000 intron (NM_032829, intron 2 of 2) L1ME4b|LINE|L1 28101 NR_026661 84983 Hs.675961 NM_032897 ENSG00000255650 FAM222A-AS1 - FAM222A antisense RNA 1 ncRNA chrX-5167 chrX 132675395 132675605 + 7.78 0.000 intron (NM_001077188, intron 4 of 5) MamSINE1|SINE|tRNA-RTE 7858 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr3-10667 chr3 150157523 150157733 + 7.78 0.000 Intergenic MSTD|LTR|ERVL-MaLR 61185 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr20-1595 chr20 4823328 4823538 + 7.78 0.000 intron (NM_014737, intron 1 of 11) CpG 175 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr8-1695 chr8 89949072 89949282 + 7.78 0.000 intron (NM_001024688, intron 12 of 16) MIRb|SINE|MIR 35494 NM_002485 4683 Hs.492208 NM_002485 ENSG00000104320 NBN AT-V1|AT-V2|ATV|NBS|NBS1|P95 nibrin protein-coding chr1-13603 chr1 9332348 9332558 + 7.78 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 39559 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr9-3108 chr9 41356736 41356946 + 7.78 0.000 Intergenic TAR1|Satellite|telo -2021 NR_148348 107984035 Hs.649184 NR_148348 LOC107984035 - uncharacterized LOC107984035 ncRNA chr8-4401 chr8 105689060 105689270 + 7.78 0.000 intron (NM_001362837, intron 5 of 7) intron (NM_001362837, intron 5 of 7) 369622 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr3-3307 chr3 160545037 160545247 + 7.78 0.000 intron (NM_002268, intron 1 of 16) intron (NM_002268, intron 1 of 16) 20429 NM_002268 3840 Hs.467866 NM_002268 ENSG00000186432 KPNA4 IPOA3|QIP1|SRP3 karyopherin subunit alpha 4 protein-coding chr6-6168 chr6 4817801 4818011 + 7.78 0.000 intron (NM_001368127, intron 1 of 5) intron (NM_001368127, intron 1 of 5) -18192 NM_001143970 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr1-10427 chr1 158245051 158245261 + 7.78 0.000 Intergenic Intergenic -3180 NM_001320652 909 Hs.1309 NM_001763 ENSG00000158477 CD1A CD1|FCB6|HTA1|R4|T6 CD1a molecule protein-coding chr18-2805 chr18 3847303 3847513 + 7.78 0.000 intron (NM_001242761, intron 4 of 11) intron (NM_001242761, intron 4 of 11) -2050 NM_001242766 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr5-6970 chr5 144957499 144957709 + 7.78 0.000 Intergenic Intergenic 752213 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr16-6740 chr16 74789086 74789296 + 7.78 0.000 Intergenic L1ME1|LINE|L1 -14371 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr21-762 chr21 43676936 43677146 + 7.78 0.000 intron (NM_015056, intron 8 of 15) intron (NM_015056, intron 8 of 15) 17481 NM_015056 23076 Hs.565725 NM_015056 ENSG00000160208 RRP1B KIAA0179|NNP1L|Nnp1|PPP1R136|RRP1 ribosomal RNA processing 1B protein-coding chr4-6585 chr4 538145 538355 + 7.78 0.000 intron (NR_144326, intron 13 of 13) intron (NR_144326, intron 13 of 13) 38050 NM_001362796 112441426 NM_001362796 TMEM271 - transmembrane protein 271 protein-coding chr9-8599 chr9 128268915 128269125 + 7.78 0.000 intron (NM_004486, intron 2 of 25) AluJr|SINE|Alu -6359 NM_001318092 375757 Hs.259594 NM_001040011 ENSG00000175854 SWI5 C9orf119|SAE3 SWI5 homologous recombination repair protein protein-coding chr1-15809 chr1 177811268 177811478 + 7.78 0.000 Intergenic Intergenic 110849 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr1-14967 chr1 89065177 89065387 + 7.78 0.000 promoter-TSS (NM_002053) promoter-TSS (NM_002053) -74 NM_002053 2633 Hs.62661 NM_002053 ENSG00000117228 GBP1 - guanylate binding protein 1 protein-coding chr1-9636 chr1 46569812 46570022 + 7.78 0.000 non-coding (NR_038403, exon 8 of 8) non-coding (NR_038403, exon 8 of 8) -18260 NM_001322255 148930 Hs.350764 NM_182516 ENSG00000162456 KNCN Kino|L5 kinocilin protein-coding chr3-9190 chr3 35795139 35795349 + 7.78 0.000 TTS (NM_001267619) TTS (NM_001267619) 50768 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr8-2058 chr8 120590496 120590706 + 7.78 0.000 intron (NM_021021, intron 3 of 6) intron (NM_021021, intron 3 of 6) 145182 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr11-10731 chr11 132036229 132036439 + 7.78 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 125516 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr2-8209 chr2 95352715 95352925 + 7.78 0.000 intron (NM_001034914, intron 1 of 7) intron (NM_001034914, intron 1 of 7) 6162 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr7-5539 chr7 45402659 45402869 + 7.78 0.000 Intergenic LTR26|LTR|ERV1 -171376 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr9-7131 chr9 131588247 131588457 + 7.78 0.000 intron (NM_198679, intron 17 of 23) intron (NM_198679, intron 17 of 23) 42829 NM_001365666 642515 NM_001365666 ENSG00000283526 PRRT1B DSPD2|IFITMD8 proline rich transmembrane protein 1B protein-coding chr1-14484 chr1 48410462 48410672 + 7.78 0.000 intron (NM_019073, intron 5 of 12) THE1D|LTR|ERVL-MaLR 61637 NM_001286238 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr11-9300 chr11 45364664 45364874 + 7.78 0.000 Intergenic AluSx1|SINE|Alu -6628 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr1-13579 chr1 8274173 8274383 + 7.78 0.000 Intergenic Intergenic -43807 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr16-5970 chr16 4860960 4861170 + 7.78 0.000 exon (NM_001288656, exon 7 of 17) exon (NM_001288656, exon 7 of 17) 12685 NM_001288656 29855 Hs.440219 NM_016936 ENSG00000118900 UBN1 VT|VT4 ubinuclein 1 protein-coding chr9-6955 chr9 99720096 99720306 + 7.78 0.000 intron (NR_109802, intron 2 of 6) intron (NR_109802, intron 2 of 6) 99688 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr1-15574 chr1 159958053 159958263 + 7.78 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -3066 NR_038849 100505633 Hs.445045 NR_038849 ENSG00000224259 LINC01133 - long intergenic non-protein coding RNA 1133 ncRNA chrX-4770 chrX 96135299 96135509 + 7.78 0.000 Intergenic Tigger4b|DNA|TcMar-Tigger 202498 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr11-3857 chr11 74007348 74007558 + 7.78 0.000 intron (NM_003356, intron 1 of 6) AluJr|SINE|Alu 1632 NM_003356 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr3-4742 chr3 75882785 75882995 + 7.78 0.000 Intergenic THE1B|LTR|ERVL-MaLR -97341 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr14-3167 chr14 69666926 69667136 + 7.78 0.000 intron (NM_014734, intron 2 of 5) intron (NM_014734, intron 2 of 5) 55435 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr20-1072 chr20 33373217 33373427 + 7.78 0.000 intron (NM_001365728, intron 10 of 14) intron (NM_001365728, intron 10 of 14) 28197 NM_016408 51654 Hs.435952 NM_016082 ENSG00000101391 CDK5RAP1 C20orf34|C42|CGI-05|HSPC167 CDK5 regulatory subunit associated protein 1 protein-coding chr20-2469 chr20 31993806 31994016 + 7.78 0.000 intron (NM_001011718, intron 1 of 2) L2b|LINE|L2 -16527 NM_080625 140706 Hs.382151 NM_080625 ENSG00000101331 CCM2L C20orf160|dJ310O13.5 CCM2 like scaffold protein protein-coding chr7-8771 chr7 79495359 79495569 + 7.78 0.000 Intergenic MER30|DNA|hAT-Charlie 41504 NR_038343 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr9-4015 chr9 37740561 37740771 + 7.78 0.000 exon (NM_014907, exon 15 of 16) exon (NM_014907, exon 15 of 16) -13137 NM_001286950 158234 Hs.655614 NM_144964 ENSG00000165275 TRMT10B RG9MTD3|bA3J10.9 tRNA methyltransferase 10B protein-coding chr7-6357 chr7 149865607 149865817 + 7.78 0.000 3' UTR (NM_001099220, exon 8 of 8) 3' UTR (NM_001099220, exon 8 of 8) -7252 NM_001367792 155066 Hs.556998 NM_145230 ENSG00000171130 ATP6V0E2 ATP6V0E2L|C7orf32 ATPase H+ transporting V0 subunit e2 protein-coding chr16-3910 chr16 82387007 82387217 + 7.78 0.000 Intergenic Intergenic -216888 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr1-13544 chr1 6861521 6861731 + 7.78 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 76172 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr5-3995 chr5 17912789 17912999 + 7.78 0.000 intron (NR_134286, intron 5 of 7) L2c|LINE|L2 105620 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr4-798 chr4 32735684 32735894 + 7.78 0.000 Intergenic MER67B|LTR|ERV1 384751 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr11-6526 chr11 69233107 69233317 + 7.78 0.000 Intergenic MER5A|DNA|hAT-Charlie -60943 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr2-12101 chr2 33943705 33943915 + 7.78 0.000 intron (NR_126403, intron 3 of 5) intron (NR_126403, intron 3 of 5) -123416 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr18-3221 chr18 47220320 47220530 + 7.78 0.000 intron (NM_001278063, intron 6 of 8) intron (NM_001278063, intron 6 of 8) 31235 NM_001278063 652991 Hs.585834 NM_001037802 ENSG00000215474 SKOR2 CH18515|CORL2|FUSSEL18 SKI family transcriptional corepressor 2 protein-coding chr1-13064 chr1 176767261 176767471 + 7.78 0.000 intron (NM_020318, intron 15 of 22) AluSc8|SINE|Alu 262079 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr1-5111 chr1 147853816 147854026 + 7.78 0.000 Intergenic Intergenic -48874 NM_005267 2703 Hs.632441 NM_005267 ENSG00000121634 GJA8 CAE|CAE1|CTRCT1|CX50|CZP1|MP70 gap junction protein alpha 8 protein-coding chr1-7390 chr1 30312296 30312506 + 7.78 0.000 Intergenic Intergenic -274789 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr7-9698 chr7 155082665 155082875 + 7.78 0.000 intron (NM_024012, intron 1 of 1) intron (NM_024012, intron 1 of 1) -11213 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chr8-5166 chr8 94035122 94035332 + 7.78 0.000 Intergenic Intergenic 118280 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr2-9290 chr2 221904577 221904787 + 7.78 0.000 Intergenic L1ME3A|LINE|L1 -330480 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr11-5944 chr11 16758184 16758394 + 7.78 0.000 TTS (NM_014267) TTS (NM_014267) 19642 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr4-5393 chr4 2157134 2157344 + 7.78 0.000 intron (NM_181808, intron 15 of 25) MIRb|SINE|MIR 84882 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr15-4702 chr15 66635404 66635614 + 7.78 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) 53319 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr10-3757 chr10 122640454 122640664 + 7.78 0.000 intron (NM_004406, intron 39 of 39) intron (NM_004406, intron 39 of 39) -32323 NM_001364461 112577516 NM_001364461 LOC112577516 - carbohydrate-binding protein AQN-1-like protein-coding chr14-4543 chr14 42791096 42791306 + 7.78 0.000 Intergenic L1P5|LINE|L1 1184345 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr16-4708 chr16 82004549 82004759 + 7.78 0.000 intron (NM_145168, intron 1 of 2) AluJb|SINE|Alu 6816 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr2-6093 chr2 189981084 189981294 + 7.78 0.000 Intergenic L1PA17|LINE|L1 81540 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chrX-1452 chrX 85084781 85084991 + 7.78 0.000 intron (NM_198450, intron 8 of 8) intron (NM_198450, intron 8 of 8) 24082 NM_001012980 340562 Hs.640783 NM_001012980 ENSG00000184788 SATL1 - spermidine/spermine N1-acetyl transferase like 1 protein-coding chr17-3540 chr17 74383014 74383224 + 7.78 0.000 Intergenic L2c|LINE|L2 15613 NM_001331076 350383 Hs.574368 NM_181790 ENSG00000257008 GPR142 GPRg1b|PGR2 G protein-coupled receptor 142 protein-coding chr2-7435 chr2 11134790 11135000 + 7.78 0.000 intron (NM_182500, intron 1 of 3) MSTB|LTR|ERVL-MaLR 1767 NM_001371320 chr1-9747 chr1 54467072 54467282 + 7.78 0.000 Intergenic THE1A|LTR|ERVL-MaLR -60783 NM_018070 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr3-10971 chr3 177533756 177533966 + 7.78 0.000 intron (NR_047568, intron 1 of 3) MIR|SINE|MIR 91940 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr10-5778 chr10 104382806 104383016 + 7.78 0.000 intron (NM_001008723, intron 9 of 17) THE1D|LTR|ERVL-MaLR 29078 NM_001008723 159686 Hs.253576 NM_001008723 ENSG00000120051 CFAP58 C10orf80|CCDC147|bA127L20.4|bA127L20.5|bA554P13.1 cilia and flagella associated protein 58 protein-coding chr22-3112 chr22 17880081 17880291 + 7.78 0.000 intron (NM_001136004, intron 16 of 21) intron (NM_001136004, intron 16 of 21) 26700 NM_001136004 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr7-6895 chr7 71251095 71251305 + 7.78 0.000 intron (NM_022479, intron 1 of 10) Charlie7|DNA|hAT-Charlie -56474 NR_037479 100500920 NR_037479 ENSG00000283278 MIR3914-2 - microRNA 3914-2 ncRNA chr7-6190 chr7 129757787 129757997 + 7.78 0.000 TTS (NM_001293164) TTS (NM_001293164) 12600 NR_029614 406958 NR_029614 ENSG00000207990 MIR182 MIRN182|miRNA182|mir-182 microRNA 182 ncRNA chr16-3405 chr16 82580306 82580516 + 7.78 0.000 Intergenic Intergenic -46558 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr7-6978 chr7 105958366 105958576 + 7.78 0.000 Intergenic Intergenic -4793 NM_152750 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr1-8571 chr1 171811645 171811855 + 7.78 0.000 Intergenic Intergenic -29748 NM_001350206 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chr2-9262 chr2 219996115 219996325 + 7.78 0.000 Intergenic Intergenic -89655 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr11-10613 chr11 124737500 124737710 + 7.78 0.000 Intergenic Intergenic -2337 NM_006176 4900 Hs.524116 NM_006176 ENSG00000154146 NRGN RC3|hng neurogranin protein-coding chr1-11858 chr1 37257491 37257701 + 7.78 0.000 Intergenic Intergenic 96033 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr2-12484 chr2 61988406 61988616 + 7.78 0.000 intron (NM_152516, intron 1 of 2) L1MA2|LINE|L1 82869 NM_152516 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr9-6466 chr9 89505935 89506145 + 7.78 0.000 Intergenic Intergenic -8067 NM_001371194 chr12-2320 chr12 132781192 132781402 + 7.78 0.000 intron (NM_005895, intron 17 of 23) AluSc8|SINE|Alu -19465 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr10-7677 chr10 28545470 28545680 + 7.78 0.000 intron (NM_100486, intron 3 of 12) intron (NM_100486, intron 3 of 12) 12457 NM_100486 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr22-3770 chr22 28123733 28123943 + 7.78 0.000 intron (NM_001145418, intron 6 of 22) AluSz|SINE|Alu -203226 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr18-3126 chr18 37578316 37578526 + 7.78 0.000 Intergenic Intergenic -12623 NR_148528 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr2-12859 chr2 96727502 96727712 + 7.78 0.000 intron (NM_001322354, intron 3 of 7) intron (NM_001322354, intron 3 of 7) 12469 NM_030805 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr15-3585 chr15 50611676 50611886 + 7.78 0.000 intron (NR_149154, intron 16 of 37) intron (NR_149154, intron 16 of 37) -65115 NM_203494 373509 Hs.677758 NM_203494 ENSG00000170236 USP50 - ubiquitin specific peptidase 50 protein-coding chr4-2585 chr4 108626332 108626542 + 7.78 0.000 intron (NM_033625, intron 5 of 5) intron (NM_033625, intron 5 of 5) 5808 NM_001319234 6164 Hs.438227 NM_000995 ENSG00000109475 RPL34 L34 ribosomal protein L34 protein-coding chr9-7388 chr9 18977353 18977563 + 7.78 0.000 intron (NM_001287049, intron 1 of 3) MIRb|SINE|MIR 55751 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr21-1039 chr21 25801527 25801737 + 7.78 0.000 Intergenic L1MEi|LINE|L1 -65978 NM_001003703 522 Hs.246310 NM_001685 ENSG00000154723 ATP5PF ATP5|ATP5A|ATP5J|ATPM|CF6|F6 ATP synthase peripheral stalk subunit F6 protein-coding chr5-4501 chr5 10987362 10987572 + 7.78 0.000 intron (NR_109988, intron 19 of 21) intron (NR_109988, intron 19 of 21) -226233 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr12-7598 chr12 78555022 78555232 + 7.78 0.000 Intergenic Intergenic -195381 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr11-4456 chr11 101319597 101319807 + 7.78 0.000 Intergenic L1M1|LINE|L1 -189889 NM_000926 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr5-8571 chr5 137201861 137202071 + 7.78 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 73769 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr4-5325 chr4 181911364 181911574 + 7.78 0.000 Intergenic Intergenic -81496 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr19-4800 chr19 35083675 35083885 + 7.78 0.000 intron (NR_024561, intron 2 of 3) L2c|LINE|L2 22491 NR_024561 100128675 Hs.633989 NR_024561 ENSG00000227392 HPN-AS1 - HPN antisense RNA 1 ncRNA chr18-1990 chr18 40179817 40180027 + 7.78 0.000 Intergenic L1M4c|LINE|L1 113636 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr11-7535 chr11 13003800 13004010 + 7.66 0.000 Intergenic Intergenic -5411 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr2-8536 chr2 131856608 131856818 + 7.66 0.000 Intergenic Intergenic -55052 NR_161366 408029 Hs.145567 NR_161366 C2orf27B - chromosome 2 open reading frame 27B ncRNA chr3-4143 chr3 122768302 122768512 + 7.66 0.000 intron (NM_001320728, intron 3 of 6) intron (NM_001320728, intron 3 of 6) 25424 NM_001320728 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr11-3444 chr11 65128400 65128610 + 7.66 0.000 intron (NM_172230, intron 15 of 15) intron (NM_172230, intron 15 of 15) 1473 NR_106809 102465449 NR_106809 ENSG00000284489 MIR6751 hsa-mir-6751 microRNA 6751 ncRNA chr16-4103 chr16 2663737 2663947 + 7.66 0.000 intron (NR_040023, intron 2 of 2) HERVK13-int|LTR|ERVK 9597 NR_040023 100507321 Hs.406976 NM_001012731 ERVK13-1 - endogenous retrovirus group K13 member 1 ncRNA chr10-3570 chr10 80168987 80169197 + 7.66 0.000 exon (NM_001278407, exon 6 of 17) exon (NM_001278407, exon 6 of 17) 35399 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr5-8176 chr5 104652856 104653066 + 7.66 0.000 Intergenic L1MA4A|LINE|L1 -446513 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr3-9008 chr3 18645437 18645647 + 7.66 0.000 Intergenic Intergenic -199950 NM_001322872 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr2-12549 chr2 68156887 68157097 + 7.66 0.000 promoter-TSS (NM_001329917) promoter-TSS (NM_001329917) 535 NM_001256476 116143 Hs.631877 NM_138458 ENSG00000243667 WDR92 - WD repeat domain 92 protein-coding chr14-3306 chr14 85587260 85587470 + 7.66 0.000 intron (NM_001346143, intron 1 of 1) intron (NM_001346143, intron 1 of 1) 54016 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr18-3057 chr18 30185401 30185611 + 7.66 0.000 Intergenic L1P4|LINE|L1 -113404 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr1-13633 chr1 10279700 10279910 + 7.66 0.000 intron (NM_001365951, intron 14 of 48) AluJr4|SINE|Alu -19161 NR_004394 26827 NR_004394 ENSG00000206625 RNU6-1 RNU6|RNU6A|U6|U6-1 RNA, U6 small nuclear 1 snRNA chr17-7976 chr17 48262085 48262295 + 7.66 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -32157 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr17-5330 chr17 28509600 28509810 + 7.66 0.000 intron (NM_001369369, intron 1 of 8) intron (NM_001369369, intron 1 of 8) 3357 NM_001369369 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chr9-4653 chr9 114852232 114852442 + 7.66 0.000 Intergenic Intergenic -46298 NM_005118 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr15-3761 chr15 63654827 63655037 + 7.66 0.000 intron (NM_003922, intron 50 of 77) intron (NM_003922, intron 50 of 77) -54105 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr4-4784 chr4 101675682 101675892 + 7.66 0.000 Intergenic MER57-int|LTR|ERV1 -114820 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr20-2609 chr20 40191078 40191288 + 7.66 0.000 Intergenic LTR55|LTR|ERVL? 186722 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr6-4045 chr6 131995932 131996142 + 7.66 0.000 Intergenic Intergenic -44665 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr14-4789 chr14 65144122 65144332 + 7.66 0.000 Intergenic MER45C|DNA|hAT-Tip100 -41532 NR_073137 4149 Hs.285354 NM_002382 ENSG00000125952 MAX bHLHd4 MYC associated factor X protein-coding chr20-2961 chr20 33153237 33153447 + 7.66 0.000 Intergenic L2c|LINE|L2 -8428 NM_001319164 140683 Hs.125960 NM_080574 ENSG00000131050 BPIFA2 C20orf70|PSP|SPLUNC2|bA49G10.1 BPI fold containing family A member 2 protein-coding chr20-1516 chr20 37404562 37404772 + 7.66 0.000 3' UTR (NM_005417, exon 14 of 14) 3' UTR (NM_005417, exon 14 of 14) 58539 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr1-14645 chr1 57879831 57880041 + 7.66 0.000 intron (NM_001353980, intron 3 of 5) intron (NM_001353980, intron 3 of 5) 19355 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr2-8449 chr2 121253351 121253561 + 7.66 0.000 intron (NM_014553, intron 2 of 14) intron (NM_014553, intron 2 of 14) 31746 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr2-4190 chr2 195532831 195533041 + 7.66 0.000 Intergenic Intergenic -124022 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr3-8013 chr3 188243410 188243620 + 7.66 0.000 intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 18110 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr5-7719 chr5 58649880 58650090 + 7.66 0.000 intron (NM_138453, intron 2 of 4) intron (NM_138453, intron 2 of 4) 66910 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr6-3309 chr6 163691097 163691307 + 7.66 0.000 Intergenic Intergenic -19718 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr9-6076 chr9 137161957 137162167 + 7.66 0.000 exon (NM_000832, exon 11 of 19) exon (NM_000832, exon 11 of 19) 7208 NR_037416 100500811 NR_037416 ENSG00000263697 MIR3621 - microRNA 3621 ncRNA chr1-14780 chr1 69585450 69585660 + 7.66 0.000 intron (NM_001366842, intron 1 of 7) intron (NM_001366842, intron 1 of 7) 16214 NM_001366842 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr10-3863 chr10 29426472 29426682 + 7.66 0.000 intron (NR_110927, intron 2 of 2) intron (NR_110927, intron 2 of 2) 16334 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr16-5216 chr16 25913640 25913850 + 7.66 0.000 intron (NM_006040, intron 1 of 1) (TG)n|Simple_repeat|Simple_repeat -111492 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr18-3174 chr18 43604845 43605055 + 7.66 0.000 Intergenic L1PA13|LINE|L1 -327460 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr9-4178 chr9 21789688 21789898 + 7.66 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -12843 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr12-5351 chr12 117140769 117140979 + 7.66 0.000 intron (NR_120464, intron 2 of 2) MLT1J-int|LTR|ERVL-MaLR 41407 NR_120464 101928244 Hs.742266 NR_120464 TESC-AS1 - TESC antisense RNA 1 (head to head) ncRNA chr13-3095 chr13 51299335 51299545 + 7.66 0.000 Intergenic Intergenic -41592 NM_001101320 647174 Hs.685891 NM_001101320 ENSG00000253309 SERPINE3 - serpin family E member 3 protein-coding chr6-7429 chr6 53581995 53582205 + 7.66 0.000 Intergenic Intergenic -8825 NR_110840 101927136 Hs.509788 NR_110840 ENSG00000231683 LOC101927136 - uncharacterized LOC101927136 ncRNA chr11-7539 chr11 14067838 14068048 + 7.66 0.000 intron (NM_006108, intron 3 of 15) intron (NM_006108, intron 3 of 15) 105220 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr9-7303 chr9 10055117 10055327 + 7.66 0.000 intron (NM_002839, intron 3 of 45) MLT1A|LTR|ERVL-MaLR 255830 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr5-8823 chr5 150369276 150369486 + 7.66 0.000 intron (NM_001008657, intron 5 of 17) intron (NM_001008657, intron 5 of 17) 11684 NM_001135245 6949 Hs.519672 NM_000356 ENSG00000070814 TCOF1 MFD1|TCS|TCS1|treacle treacle ribosome biogenesis factor 1 protein-coding chr12-4648 chr12 45192369 45192579 + 7.66 0.000 intron (NR_037144, intron 1 of 2) intron (NR_037144, intron 1 of 2) 23532 NR_037144 51054 Hs.233495 NM_015899 ENSG00000134297 PLEKHA8P1 FAPP-2|FAPP2|PLEKHA8|PLEKHA9|hFAPP2 pleckstrin homology domain containing A8 pseudogene 1 pseudo chr20-1663 chr20 32168623 32168833 + 7.66 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 21632 NR_002781 128854 Hs.647447 NR_002781 ENSG00000235217 TSPY26P TSPYL3|bA392M18.1 testis specific protein Y-linked 26, pseudogene pseudo chr16-2910 chr16 1296910 1297120 + 7.66 0.000 Intergenic LTR10A|LTR|ERV1 -12137 NM_194261 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr11-6735 chr11 82260015 82260225 + 7.66 0.000 intron (NR_120571, intron 3 of 7) intron (NR_120571, intron 3 of 7) 143793 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr4-6962 chr4 20319702 20319912 + 7.66 0.000 intron (NM_001289135, intron 4 of 35) (AAAAAC)n|Simple_repeat|Simple_repeat 67902 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr3-9694 chr3 65215603 65215813 + 7.66 0.000 Intergenic ERVL-B4-int|LTR|ERVL -527708 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr2-8795 chr2 167735317 167735527 + 7.66 0.000 Intergenic Intergenic -83250 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr2-6922 chr2 108349928 108350138 + 7.66 0.000 intron (NR_037191, intron 3 of 3) intron (NR_037191, intron 3 of 3) 27795 NR_037191 151234 Hs.447681 NR_037191 ENSG00000237223 SULT1C2P1 SULT1C1P sulfotransferase family 1C member 2 pseudogene 1 pseudo chr16-3590 chr16 72921777 72921987 + 7.66 0.000 intron (NM_001164766, intron 2 of 8) intron (NM_001164766, intron 2 of 8) 126246 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr7-3658 chr7 44520269 44520479 + 7.66 0.000 intron (NM_013389, intron 14 of 19) AluJr|SINE|Alu 20956 NM_001300967 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr3-8368 chr3 85814209 85814419 + 7.66 0.000 intron (NR_046752, intron 1 of 3) L1PA7|LINE|L1 13736 NR_046752 100874037 Hs.570566 NR_046752 ENSG00000241648 CADM2-AS2 - CADM2 antisense RNA 2 ncRNA chr3-5705 chr3 14890945 14891155 + 7.66 0.000 intron (NM_152536, intron 4 of 19) intron (NM_152536, intron 4 of 19) 56455 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr16-4624 chr16 71613291 71613501 + 7.66 0.000 Intergenic AluJo|SINE|Alu -12788 NM_052858 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chrX-1385 chrX 153764167 153764377 + 7.66 0.000 promoter-TSS (NM_005393) promoter-TSS (NM_005393) 23 NM_005393 5365 Hs.632833 NM_005393 ENSG00000198753 PLXNB3 PLEXB3|PLEXR|PLXN6 plexin B3 protein-coding chr10-3218 chr10 102470362 102470572 + 7.66 0.000 intron (NM_024789, intron 4 of 9) intron (NM_024789, intron 4 of 9) 9072 NM_024789 79847 Hs.309069 NM_024789 ENSG00000138111 MFSD13A C10orf77|TMEM180|bA18I14.8 major facilitator superfamily domain containing 13A protein-coding chrX-3702 chrX 111799181 111799391 + 7.66 0.000 intron (NM_012471, intron 7 of 10) Tigger2|DNA|TcMar-Tigger -76765 NM_001195576 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr9-3699 chr9 106953204 106953414 + 7.66 0.000 intron (NM_001347997, intron 7 of 12) L2|LINE|L2 90143 NM_001347997 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chr19-5840 chr19 42004274 42004484 + 7.66 0.000 intron (NM_002088, intron 16 of 18) intron (NM_002088, intron 16 of 18) -10149 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr1-7343 chr1 9365683 9365893 + 7.66 0.000 intron (NM_025106, intron 2 of 2) intron (NM_025106, intron 2 of 2) 63128 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr9-3715 chr9 112074982 112075192 + 7.66 0.000 intron (NM_022486, intron 12 of 16) intron (NM_022486, intron 12 of 16) 100210 NM_001282643 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr10-7011 chr10 75697685 75697895 + 7.66 0.000 intron (NR_131178, intron 1 of 7) intron (NR_131178, intron 1 of 7) -14665 NR_132791 105378367 Hs.464836 NR_132791 LOC105378367 - uncharacterized LOC105378367 ncRNA chr2-12381 chr2 53087471 53087681 + 7.66 0.000 Intergenic Intergenic -384961 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr20-3522 chr20 138118 138328 + 7.66 0.000 Intergenic L1PA15-16|LINE|L1 -4367 NM_030931 81623 Hs.124211 NM_030931 ENSG00000125788 DEFB126 C20orf8|DEFB-26|DEFB26|HBD26|bA530N10.1|hBD-26 defensin beta 126 protein-coding chr11-4848 chr11 21315291 21315501 + 7.66 0.000 intron (NM_201551, intron 14 of 18) L2|LINE|L2 645810 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr6-4646 chr6 49026983 49027193 + 7.66 0.000 Intergenic MLT2B3|LTR|ERVL 436165 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr1-12377 chr1 4427273 4427483 + 7.66 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 15327 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr8-6961 chr8 106375598 106375808 + 7.66 0.000 intron (NM_018002, intron 2 of 15) intron (NM_018002, intron 2 of 15) -72221 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr2-10737 chr2 32509140 32509350 + 7.66 0.000 intron (NM_016252, intron 51 of 73) intron (NM_016252, intron 51 of 73) -22908 NR_030285 693143 NR_030285 ENSG00000207653 MIR558 MIRN558|hsa-mir-558 microRNA 558 ncRNA chr22-3995 chr22 39332686 39332896 + 7.66 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -13168 NM_001033853 6122 Hs.119598 NM_000967 ENSG00000100316 RPL3 ASC-1|L3|TARBP-B ribosomal protein L3 protein-coding chr3-6331 chr3 79722817 79723027 + 7.66 0.000 intron (NM_002941, intron 1 of 30) intron (NM_002941, intron 1 of 30) 45076 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr15-3294 chr15 77870502 77870712 + 7.66 0.000 Intergenic Intergenic -49707 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr2-9342 chr2 226118460 226118670 + 7.66 0.000 Intergenic Intergenic -24229 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr15-3181 chr15 69947276 69947486 + 7.66 0.000 Intergenic Intergenic 112147 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr21-541 chr21 42010529 42010739 + 7.66 0.000 promoter-TSS (NM_001320729) promoter-TSS (NM_001320729) -274 NM_001320729 49854 Hs.434947 NM_020727 ENSG00000173276 ZBTB21 ZNF295 zinc finger and BTB domain containing 21 protein-coding chr13-2642 chr13 79266233 79266443 + 7.66 0.000 Intergenic Intergenic 139883 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr10-4975 chr10 30176254 30176464 + 7.66 0.000 Intergenic Intergenic -35493 NR_120653 101929279 Hs.559153 NR_120653 LOC101929279 - uncharacterized LOC101929279 ncRNA chr12-6737 chr12 5886075 5886285 + 7.66 0.000 intron (NM_001278596, intron 3 of 25) L1MA10|LINE|L1 59079 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr20-4457 chr20 62280573 62280783 + 7.66 0.000 intron (NM_001363878, intron 8 of 14) intron (NM_001363878, intron 8 of 14) -22218 NM_001281438 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr6-3859 chr6 43706277 43706487 + 7.66 0.000 Intergenic Intergenic -18570 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr16-4334 chr16 30674203 30674413 + 7.66 0.000 Intergenic Intergenic 15877 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding chr20-4024 chr20 36651897 36652107 + 7.66 0.000 non-coding (NR_038370, exon 14 of 14) non-coding (NR_038370, exon 14 of 14) -5806 NM_175077 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr9-4743 chr9 130320123 130320333 + 7.66 0.000 intron (NM_001291815, intron 16 of 97) (TCCC)n|Simple_repeat|Simple_repeat 54468 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr12-2446 chr12 52685638 52685848 + 7.66 0.000 Intergenic Intergenic -5336 NM_006121 3848 Hs.80828 NM_006121 ENSG00000167768 KRT1 CK1|EHK|EHK1|EPPK|K1|KRT1A|NEPPK keratin 1 protein-coding chr7-8963 chr7 99000178 99000388 + 7.66 0.000 intron (NM_003496, intron 65 of 70) AluSz|SINE|Alu -12882 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr7-8337 chr7 42852188 42852398 + 7.66 0.000 Intergenic Intergenic 59550 NM_001363436 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr2-7581 chr2 25273743 25273953 + 7.66 0.000 intron (NR_135490, intron 6 of 23) L2b|LINE|L2 -21533 NM_153759 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr10-2857 chr10 71552883 71553093 + 7.66 0.000 intron (NM_052836, intron 6 of 12) MIRc|SINE|MIR -41068 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr2-6188 chr2 8983634 8983844 + 7.66 0.000 intron (NR_135603, intron 1 of 13) L1MC4|LINE|L1 19945 NR_135600 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr8-2958 chr8 52355127 52355337 + 7.66 0.000 intron (NR_148195, intron 2 of 3) MER115|DNA|hAT-Tip100 54524 NM_001352883 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr12-4308 chr12 124869643 124869853 + 7.66 0.000 Intergenic AluSz|SINE|Alu -5884 NR_160423 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr15-4078 chr15 70825336 70825546 + 7.66 0.000 Intergenic Intergenic -27798 NM_001284357 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr2-14743 chr2 239291437 239291647 + 7.66 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -13920 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr2-9657 chr2 26424075 26424285 + 7.66 0.000 intron (NM_145038, intron 3 of 16) intron (NM_145038, intron 3 of 16) 22260 NM_145038 92749 Hs.393714 NM_145038 ENSG00000157856 DRC1 C2orf39|CCDC164|CILD21 dynein regulatory complex subunit 1 protein-coding chr4-4589 chr4 76206377 76206587 + 7.66 0.000 intron (NM_001204255, intron 1 of 8) intron (NM_001204255, intron 1 of 8) 7342 NM_001204255 950 Hs.349656 NM_005506 ENSG00000138760 SCARB2 AMRF|CD36L2|EPM4|HLGP85|LGP85|LIMP-2|LIMPII|SR-BII scavenger receptor class B member 2 protein-coding chr3-9650 chr3 60660184 60660394 + 7.66 0.000 intron (NM_001320900, intron 5 of 9) L1M4c|LINE|L1 -42419 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr16-3085 chr16 66433938 66434148 + 7.66 0.000 intron (NM_001136106, intron 1 of 3) intron (NM_001136106, intron 1 of 3) 6748 NM_001197224 146227 Hs.97805 NM_001136106 ENSG00000166546 BEAN1 BEAN|SCA31 brain expressed associated with NEDD4 1 protein-coding chr5-5676 chr5 160176716 160176926 + 7.66 0.000 Intergenic L2b|LINE|L2 -10560 NM_001130958 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chrX-1526 chrX 24171797 24172007 + 7.66 0.000 intron (NM_001178085, intron 4 of 10) (AG)n|Simple_repeat|Simple_repeat 22173 NM_001178084 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr5-6679 chr5 61594459 61594669 + 7.66 0.000 Intergenic L2a|LINE|L2 -43196 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr1-5103 chr1 119903351 119903561 + 7.66 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -6941 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr4-3797 chr4 108398487 108398697 + 7.66 0.000 Intergenic Intergenic -158641 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chr2-9895 chr2 221246339 221246549 + 7.66 0.000 Intergenic AluSc8|SINE|Alu 325860 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr4-8707 chr4 182718943 182719153 + 7.66 0.000 intron (NM_001080477, intron 13 of 27) intron (NM_001080477, intron 13 of 27) 198205 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr15-3897 chr15 100759759 100759969 + 7.66 0.000 Intergenic Intergenic -89888 NR_160704 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA chr6-6452 chr6 102209930 102210140 + 7.66 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 811050 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr5-6986 chr5 149913934 149914144 + 7.66 0.000 intron (NM_000440, intron 6 of 21) intron (NM_000440, intron 6 of 21) 18938 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr9-5461 chr9 98657871 98658081 + 7.66 0.000 intron (NM_005458, intron 1 of 18) THE1D|LTR|ERVL-MaLR 50959 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr6-7338 chr6 46189951 46190161 + 7.66 0.000 Intergenic Intergenic -19046 NM_001290073 59084 Hs.35198 NM_021572 ENSG00000112796 ENPP5 NPP-5|NPP5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 protein-coding chr5-7519 chr5 36651928 36652138 + 7.66 0.000 intron (NM_004172, intron 3 of 9) intron (NM_004172, intron 3 of 9) 45427 NM_001166695 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr3-1857 chr3 111999147 111999357 + 7.66 0.000 promoter-TSS (NM_001008273) promoter-TSS (NM_001008273) 92 NM_001008273 29114 Hs.169330 NM_013259 ENSG00000144834 TAGLN3 NP22|NP24|NP25 transgelin 3 protein-coding chr10-6033 chr10 126665037 126665247 + 7.66 0.000 intron (NM_001350922, intron 1 of 8) intron (NM_001350922, intron 1 of 8) 5368 NM_001350922 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr22-1936 chr22 46651261 46651471 + 7.66 0.000 intron (NM_015124, intron 3 of 18) intron (NM_015124, intron 3 of 18) 30980 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr7-3536 chr7 9727388 9727598 + 7.66 0.000 Intergenic Intergenic 93223 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr11-3411 chr11 9720128 9720338 + 7.66 0.000 intron (NM_015055, intron 3 of 11) intron (NM_015055, intron 3 of 11) -38060 NR_036485 283104 Hs.632156 NR_036485 ENSG00000246273 SBF2-AS1 - SBF2 antisense RNA 1 ncRNA chr9-4490 chr9 36100498 36100708 + 7.66 0.000 intron (NM_021111, intron 11 of 20) intron (NM_021111, intron 11 of 20) -35933 NR_104641 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr18-2078 chr18 48937463 48937673 + 7.66 0.000 intron (NM_001190822, intron 3 of 3) intron (NM_001190822, intron 3 of 3) 5239 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr7-4840 chr7 102199179 102199389 + 7.66 0.000 intron (NM_001202543, intron 16 of 23) intron (NM_001202543, intron 16 of 23) -85857 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr16-5963 chr16 4668386 4668596 + 7.66 0.000 intron (NM_001142290, intron 8 of 16) intron (NM_001142290, intron 8 of 16) -2827 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr17-7332 chr17 5799060 5799270 + 7.66 0.000 intron (NR_040000, intron 1 of 3) MamGypLTR1d|LTR|Gypsy 26931 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr9-2758 chr9 104926522 104926732 + 7.66 0.000 intron (NM_005502, intron 1 of 49) CpG 1528 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr3-5584 chr3 6929180 6929390 + 7.66 0.000 intron (NM_000844, intron 1 of 9) intron (NM_000844, intron 1 of 9) -35268 NR_131906 105376946 Hs.616038 NR_131906 ENSG00000237665 GRM7-AS2 - GRM7 antisense RNA 2 ncRNA chr1-11364 chr1 37978339 37978549 + 7.66 0.000 intron (NM_006802, intron 11 of 16) intron (NM_006802, intron 11 of 16) 11578 NM_001320830 10946 Hs.77897 NM_006802 ENSG00000183431 SF3A3 PRP9|PRPF9|SAP61|SF3a60 splicing factor 3a subunit 3 protein-coding KI270819.1-2 KI270819.1 86863 87073 + 7.66 0.000 NA NA NA NA chr1-7367 chr1 20682527 20682737 + 7.66 0.000 intron (NM_001122819, intron 11 of 14) intron (NM_001122819, intron 11 of 14) -21088 NM_005216 1650 Hs.523145 NM_005216 ENSG00000244038 DDOST AGER1|CDG1R|GATD6|OKSWcl45|OST|OST48|WBP1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit protein-coding chr11-6579 chr11 72287364 72287574 + 7.66 0.000 3' UTR (NM_001258392, exon 16 of 16) 3' UTR (NM_001258392, exon 16 of 16) -43293 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr12-3371 chr12 96191993 96192203 + 7.66 0.000 Intergenic L1MC1|LINE|L1 -2277 NM_005230 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr11-8013 chr11 14110298 14110508 + 7.66 0.000 intron (NM_006108, intron 5 of 15) intron (NM_006108, intron 5 of 15) 147680 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chrX-5439 chrX 153913055 153913265 + 7.66 0.000 intron (NM_001666, intron 10 of 21) intron (NM_001666, intron 10 of 21) 8446 NM_001146151 554 Hs.567240 NM_000054 ENSG00000126895 AVPR2 ADHR|DI1|DIR|DIR3|NDI|V2R arginine vasopressin receptor 2 protein-coding chr11-5225 chr11 17602397 17602607 + 7.66 0.000 intron (NM_001277269, intron 31 of 54) intron (NM_001277269, intron 31 of 54) 55129 NM_001277269 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding chr1-14946 chr1 86774290 86774500 + 7.66 0.000 Intergenic Intergenic 69819 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr7-2712 chr7 30931524 30931734 + 7.66 0.000 Intergenic Intergenic 19776 NM_001329872 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr8-7115 chr8 119449978 119450188 + 7.66 0.000 Intergenic Intergenic 33637 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr11-6879 chr11 102518813 102519023 + 7.66 0.000 Intergenic Intergenic 11829 NM_002423 4316 Hs.2256 NM_002423 ENSG00000137673 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 protein-coding chr10-2136 chr10 43205075 43205285 + 7.66 0.000 intron (NM_145313, intron 2 of 12) intron (NM_145313, intron 2 of 12) 24559 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr5-5198 chr5 112684046 112684256 + 7.66 0.000 Intergenic Intergenic -1263 NR_104673 102467216 Hs.174158 NR_104673 LOC102467216 - uncharacterized LOC102467216 ncRNA chr12-7478 chr12 65526122 65526332 + 7.66 0.000 intron (NR_120431, intron 2 of 3) intron (NR_120431, intron 2 of 3) 31084 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr8-7017 chr8 109914127 109914337 + 7.66 0.000 Intergenic Intergenic 61539 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr18-1350 chr18 568754 568964 + 7.66 0.000 Intergenic Intergenic -11521 NM_004066 1068 Hs.122511 NM_004066 ENSG00000177143 CETN1 CEN1|CETN centrin 1 protein-coding chr10-4936 chr10 24882337 24882547 + 7.66 0.000 intron (NM_020200, intron 3 of 8) L2c|LINE|L2 70164 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr21-1266 chr21 17520825 17521035 + 7.66 0.000 intron (NM_001207066, intron 1 of 7) L2c|LINE|L2 7887 NM_001207064 1525 Hs.627078 NM_001338 ENSG00000154639 CXADR CAR|CAR4/6|HCAR CXADR Ig-like cell adhesion molecule protein-coding chr2-13944 chr2 185006735 185006945 + 7.66 0.000 Intergenic MER11A|LTR|ERVK 160232 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA chr6-8165 chr6 132006460 132006670 + 7.66 0.000 Intergenic MIRb|SINE|MIR -55193 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr2-4690 chr2 218339930 218340140 + 7.66 0.000 exon (NM_015488, exon 4 of 10) exon (NM_015488, exon 4 of 10) -1876 NR_106868 102466197 NR_106868 ENSG00000278524 MIR6810 hsa-mir-6810 microRNA 6810 ncRNA chr21-1824 chr21 40130502 40130712 + 7.66 0.000 intron (NR_073202, intron 19 of 32) intron (NR_073202, intron 19 of 32) 81824 NR_039917 100616148 NR_039917 ENSG00000263973 MIR4760 - microRNA 4760 ncRNA chr18-2718 chr18 68216079 68216289 + 7.66 0.000 Intergenic LTR81A|LTR|Gypsy -401362 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr17-6927 chr17 40796719 40796929 + 7.66 0.000 intron (NM_181535, intron 5 of 7) intron (NM_181535, intron 5 of 7) 3135 NM_181535 162605 Hs.59736 NM_181535 ENSG00000173908 KRT28 K25IRS4|KRT25D keratin 28 protein-coding chr4-7841 chr4 101872104 101872314 + 7.66 0.000 intron (NM_017935, intron 5 of 16) intron (NM_017935, intron 5 of 16) 58367 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr1-16718 chr1 247457357 247457567 + 7.66 0.000 Intergenic Intergenic -5480 NM_001004492 127623 Hs.446999 NM_001004492 ENSG00000177535 OR2B11 - olfactory receptor family 2 subfamily B member 11 protein-coding chr19-5068 chr19 50608136 50608346 + 7.66 0.000 Intergenic CpG 3278 NR_004384 100126781 Hs.707968 NR_004384 SNAR-F - small NF90 (ILF3) associated RNA F snRNA chr2-8079 chr2 74353723 74353933 + 7.66 0.000 Intergenic Intergenic -10412 NM_133478 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr9-6787 chr9 32169266 32169476 + 7.66 0.000 Intergenic Intergenic -215232 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr21-1673 chr21 26938383 26938593 + 7.66 0.000 intron (NM_007038, intron 3 of 7) intron (NM_007038, intron 3 of 7) -15473 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 - microRNA 4759 ncRNA chr6-3958 chr6 96542742 96542952 + 7.66 0.000 intron (NM_015323, intron 11 of 18) intron (NM_015323, intron 11 of 18) -19678 NM_001170807 9457 Hs.632608 NM_020482 ENSG00000112214 FHL5 1700027G07Rik|ACT|FHL-5|dJ393D12.2 four and a half LIM domains 5 protein-coding chr8-3597 chr8 140049337 140049547 + 7.66 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 51093 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr2-11208 chr2 159836455 159836665 + 7.66 0.000 intron (NM_002349, intron 25 of 34) intron (NM_002349, intron 25 of 34) -38305 NM_001198763 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr19-1881 chr19 39199154 39199364 + 7.66 0.000 exon (NM_001001414, exon 4 of 6) exon (NM_001001414, exon 4 of 6) 2295 NM_001001414 342897 Hs.726934 NM_001001414 ENSG00000188505 NCCRP1 FBXO50|NCCRP-1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) protein-coding chr7-8235 chr7 34859244 34859454 + 7.66 0.000 intron (NM_207173, intron 8 of 8) intron (NM_207173, intron 8 of 8) -25018 NR_015356 404744 Hs.487951 NM_207283 ENSG00000197085 NPSR1-AS1 AAA1 NPSR1 antisense RNA 1 ncRNA chr7-3546 chr7 12642931 12643141 + 7.66 0.000 intron (NR_156701, intron 11 of 14) intron (NR_156701, intron 11 of 14) -43791 NM_212460 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr3-2790 chr3 195989669 195989879 + 7.66 0.000 intron (NR_003264, intron 1 of 16) CpG 505 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr1-12453 chr1 16000849 16001059 + 7.66 0.000 Intergenic L1MD3|LINE|L1 -3282 NM_178840 149563 Hs.29190 NM_178840 ENSG00000183888 SRARP C1orf64|ERRF steroid receptor associated and regulated protein protein-coding chr20-1945 chr20 24819554 24819764 + 7.66 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -129610 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr2-6205 chr2 21466139 21466349 + 7.66 0.000 Intergenic LTR24B|LTR|ERV1 244408 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr11-9795 chr11 70045787 70045997 + 7.66 0.000 Intergenic Intergenic 18032 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr8-6610 chr8 74112507 74112717 + 7.66 0.000 Intergenic Intergenic 121220 NM_015364 23643 Hs.726603 NM_015364 ENSG00000154589 LY96 ESOP-1|MD-2|MD2|ly-96 lymphocyte antigen 96 protein-coding chr3-11199 chr3 193823508 193823718 + 7.66 0.000 Intergenic Intergenic 20396 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr19-6764 chr19 40222806 40223016 + 7.66 0.000 3' UTR (NM_024877, exon 5 of 5) 3' UTR (NM_024877, exon 5 of 5) 3778 NM_024877 79935 Hs.631603 NM_024877 ENSG00000105219 CNTD2 CCNP cyclin N-terminal domain containing 2 protein-coding chr18-1501 chr18 80095636 80095846 + 7.66 0.000 Intergenic Intergenic -13521 NM_014913 22850 Hs.131915 NM_014913 ENSG00000101544 ADNP2 ZNF508 ADNP homeobox 2 protein-coding chr1-9169 chr1 20319269 20319479 + 7.66 0.000 intron (NM_001039500, intron 6 of 21) intron (NM_001039500, intron 6 of 21) 28499 NM_001039500 127731 Hs.205178 NM_144623 ENSG00000158816 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding chr18-3518 chr18 75097797 75098007 + 7.66 0.000 Intergenic Intergenic 107611 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr10-6786 chr10 3518596 3518806 + 7.66 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) -15863 NR_155744 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chrX-910 chrX 136131137 136131347 + 7.66 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -15460 NR_027621 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr8-4100 chr8 69519395 69519605 + 7.66 0.000 intron (NR_156414, intron 2 of 20) intron (NR_156414, intron 2 of 20) 26653 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr2-11047 chr2 112259635 112259845 + 7.66 0.000 Intergenic ERVL-E-int|LTR|ERVL -4698 NM_032494 84524 Hs.418416 NM_032494 ENSG00000144161 ZC3H8 Fliz1|ZC3HDC8 zinc finger CCCH-type containing 8 protein-coding chr2-6588 chr2 231222230 231222440 + 7.66 0.000 intron (NM_001352757, intron 5 of 19) intron (NM_001352757, intron 5 of 19) 23704 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr8-5065 chr8 30788623 30788833 + 7.66 0.000 intron (NM_001009552, intron 6 of 6) L1MEd|LINE|L1 24090 NM_001009552 5516 Hs.491440 NM_004156 ENSG00000104695 PPP2CB PP2Abeta|PP2CB protein phosphatase 2 catalytic subunit beta protein-coding chr2-6593 chr2 234770333 234770543 + 7.66 0.000 Intergenic Intergenic 87770 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr8-6522 chr8 66994069 66994279 + 7.66 0.000 intron (NM_001364910, intron 5 of 7) intron (NM_001364910, intron 5 of 7) -31583 NM_001193502 100129654 Hs.120040 NM_001193502 ENSG00000261787 TCF24 TCF-24|bHLHa25 transcription factor 24 protein-coding chr14-4316 chr14 21854360 21854570 + 7.66 0.000 Intergenic Intergenic -183448 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr2-14599 chr2 232676700 232676910 + 7.66 0.000 intron (NM_025202, intron 3 of 3) intron (NM_025202, intron 3 of 3) -20526 NR_103493 26058 Hs.565319 NM_015575 ENSG00000204120 GIGYF2 GYF2|PARK11|PERQ2|PERQ3|TNRC15 GRB10 interacting GYF protein 2 protein-coding chr12-8165 chr12 121518479 121518689 + 7.66 0.000 intron (NM_001005366, intron 9 of 22) intron (NM_001005366, intron 9 of 22) 61662 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr19-3905 chr19 42057326 42057536 + 7.66 0.000 intron (NM_002088, intron 5 of 18) AluJr|SINE|Alu 8374 NM_002088 2901 Hs.367799 NM_002088 ENSG00000105737 GRIK5 EAA2|GRIK2|GluK5|KA2 glutamate ionotropic receptor kainate type subunit 5 protein-coding chr6-5954 chr6 79192969 79193179 + 7.66 0.000 Intergenic Intergenic -40600 NR_040671 100288198 Hs.586270 NR_040671 ENSG00000270362 HMGN3-AS1 - HMGN3 antisense RNA 1 ncRNA chr13-4397 chr13 109646411 109646621 + 7.66 0.000 Intergenic Intergenic -81758 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr5-3053 chr5 28077818 28078028 + 7.66 0.000 Intergenic LTR12C|LTR|ERV1 209742 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr3-4986 chr3 16288914 16289124 + 7.66 0.000 intron (NM_001330670, intron 5 of 8) MIR|SINE|MIR 23807 NR_148220 92106 Hs.655449 NM_138381 ENSG00000154814 OXNAD1 - oxidoreductase NAD binding domain containing 1 protein-coding chr17-4091 chr17 80210046 80210256 + 7.66 0.000 TTS (NM_001366385) TTS (NM_001366385) 10182 NM_001352921 6448 Hs.31074 NM_000199 ENSG00000181523 SGSH HSS|MPS3A|SFMD N-sulfoglucosamine sulfohydrolase protein-coding chr4-1722 chr4 186557634 186557844 + 7.66 0.000 Intergenic MSTB2|LTR|ERVL-MaLR -2172 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr2-7971 chr2 64377390 64377600 + 7.66 0.000 Intergenic FLAM_C|SINE|Alu -36647 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr22-3328 chr22 21774776 21774986 + 7.66 0.000 intron (NM_002745, intron 6 of 8) intron (NM_002745, intron 6 of 8) -39087 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr2-14057 chr2 196459608 196459818 + 7.66 0.000 intron (NM_001348768, intron 1 of 28) MER72|LTR|ERV1 -97536 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr9-3388 chr9 129399367 129399577 + 7.66 0.000 Intergenic Intergenic 62549 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr17-7158 chr17 78580950 78581160 + 7.66 0.000 Intergenic LTR33A|LTR|ERVL -3661 NM_173628 8632 Hs.375975 NM_003727 ENSG00000187775 DNAH17 DNAHL1|DNEL2 dynein axonemal heavy chain 17 protein-coding chr8-6694 chr8 82879589 82879799 + 7.66 0.000 Intergenic AluJb|SINE|Alu -32410 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr12-5179 chr12 104155802 104156012 + 7.66 0.000 Intergenic Intergenic -17697 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr14-2563 chr14 34110018 34110228 + 7.66 0.000 Intergenic Intergenic -159049 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr10-3975 chr10 119873478 119873688 + 7.66 0.000 promoter-TSS (NM_001256378) promoter-TSS (NM_001256378) 45 NM_001256379 79892 Hs.124246 NM_024834 ENSG00000197771 MCMBP C10orf119|MCM-BP minichromosome maintenance complex binding protein protein-coding chr15-4550 chr15 57226907 57227117 + 7.66 0.000 intron (NM_207040, intron 1 of 12) intron (NM_207040, intron 1 of 12) 7582 NM_001306219 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr11-9276 chr11 44732136 44732346 + 7.66 0.000 intron (NM_130783, intron 1 of 9) intron (NM_130783, intron 1 of 9) 5279 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr7-9142 chr7 111077690 111077900 + 7.66 0.000 intron (NM_032549, intron 3 of 5) L2a|LINE|L2 -13211 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr16-4815 chr16 86492743 86492953 + 7.66 0.000 intron (NR_036444, intron 1 of 3) intron (NR_036444, intron 1 of 3) 16012 NR_036444 400550 Hs.448825 NR_033925 ENSG00000268388 FENDRR FOXF1-AS1|FOXF1AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21 FOXF1 adjacent non-coding developmental regulatory RNA ncRNA chr15-4626 chr15 62259170 62259380 + 7.66 0.000 Intergenic PABL_B|LTR|ERV1 -10480 NR_136885 255180 Hs.370479 NM_173805 GOLGA2P11 - GOLGA2 pseudogene 11 pseudo chr4-3376 chr4 14022623 14022833 + 7.66 0.000 Intergenic Intergenic -89240 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr3-3235 chr3 30286055 30286265 + 7.66 0.000 Intergenic Intergenic -232708 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr16-5366 chr16 86013486 86013696 + 7.66 0.000 Intergenic Intergenic 95244 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr10-3504 chr10 70542033 70542243 + 7.66 0.000 intron (NM_014431, intron 17 of 19) intron (NM_014431, intron 17 of 19) 60603 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr14-1904 chr14 103155186 103155396 + 7.66 0.000 Intergenic Intergenic 28985 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr19-2812 chr19 49133841 49134051 + 7.66 0.000 intron (NR_103842, intron 10 of 28) intron (NR_103842, intron 10 of 28) 14402 NR_103842 8541 Hs.413748 NM_003660 ENSG00000177380 PPFIA3 LPNA3 PTPRF interacting protein alpha 3 protein-coding chr8-3941 chr8 46407438 46407648 + 7.66 0.000 Intergenic GSAT|Satellite|centr 210100 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr4-7384 chr4 61411186 61411396 + 7.66 0.000 intron (NM_001371343, intron 2 of 23) L1MC4|LINE|L1 209119 NM_001371342 chr15-2452 chr15 78397122 78397332 + 7.66 0.000 Intergenic Intergenic -40204 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr17-4444 chr17 49021178 49021388 + 7.66 0.000 intron (NM_001160423, intron 2 of 12) intron (NM_001160423, intron 2 of 12) 23898 NM_001160423 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chrX-3563 chrX 69363135 69363345 + 7.66 0.000 Intergenic Intergenic -141995 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr4-7189 chr4 41069795 41070005 + 7.66 0.000 intron (NM_173075, intron 3 of 16) intron (NM_173075, intron 3 of 16) 144642 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr1-8572 chr1 172005919 172006129 + 7.66 0.000 intron (NM_001278252, intron 4 of 14) intron (NM_001278252, intron 4 of 14) -132784 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA chr8-6068 chr8 25916803 25917013 + 7.66 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 128505 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr6-8046 chr6 120530821 120531031 + 7.66 0.000 Intergenic THE1D|LTR|ERVL-MaLR 515747 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr10-4731 chr10 868855 869065 + 7.66 0.000 intron (NM_001351277, intron 3 of 17) intron (NM_001351277, intron 3 of 17) 62745 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr1-7202 chr1 214833476 214833686 + 7.66 0.000 Intergenic Intergenic -171961 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr2-13459 chr2 145906571 145906781 + 7.66 0.000 Intergenic L1MDa|LINE|L1 -680381 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-4889 chr2 126571293 126571503 + 7.66 0.000 Intergenic MIRc|SINE|MIR -84537 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr17-4647 chr17 15954327 15954537 + 7.66 0.000 intron (NM_000676, intron 1 of 1) intron (NM_000676, intron 1 of 1) 9515 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr4-1556 chr4 894182 894392 + 7.66 0.000 intron (NM_005255, intron 7 of 27) CpG-20767 38029 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr13-2637 chr13 78703076 78703286 + 7.66 0.000 Intergenic L1PA8|LINE|L1 -44026 NM_024546 79596 Hs.567576 NM_024546 ENSG00000152193 OBI1 C13orf7|RNF219 ORC ubiquitin ligase 1 protein-coding chr7-7954 chr7 11577825 11578035 + 7.66 0.000 intron (NM_015204, intron 4 of 26) MamGypsy2-I|LTR|Gypsy 254268 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr16-5380 chr16 87722116 87722326 + 7.66 0.000 intron (NM_001184856, intron 6 of 10) intron (NM_001184856, intron 6 of 10) 43765 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr1-15846 chr1 181101620 181101830 + 7.66 0.000 Intergenic Intergenic 13025 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr4-6706 chr4 3640617 3640827 + 7.66 0.000 Intergenic Intergenic 37133 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr11-4862 chr11 33716275 33716485 + 7.66 0.000 intron (NM_001127223, intron 2 of 2) intron (NM_001127223, intron 2 of 2) 6347 NM_001127223 966 Hs.278573 NM_000611 ENSG00000085063 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule (CD59 blood group) protein-coding chr7-4985 chr7 154277076 154277286 + 7.66 0.000 intron (NM_130797, intron 1 of 25) Tigger17a|DNA|TcMar-Tigger -27978 NM_001290252 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr4-1662 chr4 125322237 125322447 + 7.66 0.000 intron (NM_001291303, intron 1 of 16) intron (NM_001291303, intron 1 of 16) 5930 NM_001291303 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr18-1696 chr18 475741 475951 + 7.66 0.000 intron (NM_130386, intron 2 of 9) intron (NM_130386, intron 2 of 9) 24855 NM_130386 81035 Hs.464422 NM_030781 ENSG00000158270 COLEC12 CLP1|NSR2|SCARA4|SRCL collectin subfamily member 12 protein-coding chr7-3725 chr7 66576953 66577163 + 7.66 0.000 intron (NR_111976, intron 1 of 3) GA-rich|Low_complexity|Low_complexity 15349 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr6-7745 chr6 91804857 91805067 + 7.66 0.000 Intergenic L1ME1|LINE|L1 -114534 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr8-6785 chr8 94700300 94700510 + 7.66 0.000 intron (NM_017697, intron 15 of 15) MLT1D|LTR|ERVL-MaLR -19495 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr2-13832 chr2 176351675 176351885 + 7.66 0.000 Intergenic Intergenic 82338 NM_001006635 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr17-3244 chr17 19891839 19892049 + 7.66 0.000 Intergenic HERVH-int|LTR|ERV1 -24008 NM_014683 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr16-3441 chr16 89533881 89534091 + 7.66 0.000 intron (NM_001363850, intron 9 of 17) FAM|SINE|Alu 25583 NM_199367 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7 matrix AAA peptidase subunit, paraplegin protein-coding chr2-10963 chr2 87454378 87454588 + 7.66 0.000 promoter-TSS (NR_146461) promoter-TSS (NR_146461) -944 NR_146461 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr2-6576 chr2 225450243 225450453 + 7.66 0.000 intron (NM_001371273, intron 3 of 7) intron (NM_001371273, intron 3 of 7) 49462 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr8-2158 chr8 41539280 41539490 + 7.66 0.000 intron (NR_125824, intron 1 of 2) L3|LINE|CR1 10124 NM_032336 84296 Hs.656996 NM_032336 ENSG00000147536 GINS4 SLD5 GINS complex subunit 4 protein-coding chr9-3293 chr9 74635199 74635409 + 7.66 0.000 intron (NM_006914, intron 3 of 9) intron (NM_006914, intron 3 of 9) 19770 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr17-6928 chr17 41604732 41604942 + 7.66 0.000 Intergenic L1ME4a|LINE|L1 7930 NM_005557 3868 Hs.655160 NM_005557 ENSG00000186832 KRT16 CK16|FNEPPK|K16|K1CP|KRT16A|NEPPK|PC1 keratin 16 protein-coding chr2-11857 chr2 21579953 21580163 + 7.66 0.000 Intergenic Intergenic 130594 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr9-6400 chr9 35675566 35675776 + 7.66 0.000 intron (NM_001216, intron 2 of 10) CpG 1743 NM_001216 768 Hs.63287 NM_001216 ENSG00000107159 CA9 CAIX|MN carbonic anhydrase 9 protein-coding chr12-6797 chr12 10624753 10624963 + 7.66 0.000 exon (NM_018423, exon 8 of 11) exon (NM_018423, exon 8 of 11) -11249 NM_018048 55110 Hs.104650 NM_018048 ENSG00000111196 MAGOHB MGN2|mago|magoh mago homolog B, exon junction complex subunit protein-coding chr5-4989 chr5 80701591 80701801 + 7.66 0.000 intron (NM_002439, intron 8 of 23) intron (NM_002439, intron 8 of 23) -46713 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr4-2257 chr4 168605489 168605699 + 7.66 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) -25984 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr14-3668 chr14 92122633 92122843 + 7.66 0.000 intron (NM_001322272, intron 1 of 15) intron (NM_001322272, intron 1 of 15) 769 NM_001322270 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr12-5911 chr12 64687600 64687810 + 7.66 0.000 intron (NR_040718, intron 2 of 3) intron (NR_040718, intron 2 of 3) -65100 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr11-10108 chr11 87014092 87014302 + 7.66 0.000 Intergenic Intergenic -23737 NM_001168724 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr5-3961 chr5 8113974 8114184 + 7.66 0.000 Intergenic MSTA|LTR|ERVL-MaLR 244931 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr2-3832 chr2 27306833 27307043 + 7.66 0.000 TTS (NM_003353) TTS (NM_003353) 1507 NM_003353 7349 Hs.534363 NM_003353 ENSG00000163794 UCN UI|UROC urocortin protein-coding chr3-6919 chr3 157543228 157543438 + 7.66 0.000 promoter-TSS (NM_001130002) promoter-TSS (NM_001130002) -11 NM_001243729 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr6-8495 chr6 157399642 157399852 + 7.66 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 18557 NM_153746 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr1-5555 chr1 234724238 234724448 + 7.66 0.000 intron (NR_038856, intron 1 of 2) intron (NR_038856, intron 1 of 2) 301 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA chr5-3900 chr5 154795191 154795401 + 7.66 0.000 exon (NM_001367718, exon 8 of 19) exon (NM_001367718, exon 8 of 19) -34162 NR_039667 100616306 NR_039667 ENSG00000263361 MIR378H - microRNA 378h ncRNA chr20-4041 chr20 37190524 37190734 + 7.66 0.000 intron (NM_001324306, intron 2 of 15) intron (NM_001324306, intron 2 of 15) -11081 NM_152503 140699 Hs.349125 NM_152503 ENSG00000101353 MROH8 C20orf131|C20orf132 maestro heat like repeat family member 8 protein-coding chr11-6549 chr11 70171942 70172152 + 7.66 0.000 intron (NM_018043, intron 22 of 25) AluJb|SINE|Alu -31116 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr5-5205 chr5 113669768 113669978 + 7.66 0.000 Intergenic L1PB1|LINE|L1 156179 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr3-4992 chr3 18426879 18427089 + 7.66 0.000 intron (NM_001322874, intron 1 of 10) intron (NM_001322874, intron 1 of 10) -1645 NM_002971 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr12-4890 chr12 64989902 64990112 + 7.66 0.000 intron (NR_146276, intron 1 of 3) intron (NR_146276, intron 1 of 3) 2284 NR_146276 109729131 Hs.577553 NR_146276 ENSG00000248995 LINC02231 - long intergenic non-protein coding RNA 2231 ncRNA chrX-3017 chrX 65946793 65947003 + 7.66 0.000 Intergenic L1PA15|LINE|L1 -71972 NR_029637 407008 NR_029637 ENSG00000284567 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA chr8-6163 chr8 32168103 32168313 + 7.66 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) 141990 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr1-12061 chr1 119280159 119280369 + 7.66 0.000 Intergenic Intergenic -47988 NR_146623 105378934 NR_146623 ENSG00000232650 LINC01780 - long intergenic non-protein coding RNA 1780 ncRNA chr22-1643 chr22 37391107 37391317 + 7.66 0.000 intron (NM_052906, intron 2 of 2) L2b|LINE|L2 36258 NR_110512 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr17-6950 chr17 43766670 43766880 + 7.66 0.000 3' UTR (NM_004090, exon 3 of 3) 3' UTR (NM_004090, exon 3 of 3) -7984 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr12-7583 chr12 76589157 76589367 + 7.66 0.000 Intergenic Intergenic -29491 NM_001319652 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr17-4203 chr17 29199440 29199650 + 7.66 0.000 Intergenic L2c|LINE|L2 -19147 NM_001346765 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chrX-3001 chrX 49257428 49257638 + 7.66 0.000 exon (NM_001114377, exon 3 of 11) exon (NM_001114377, exon 3 of 11) 7177 NM_001114377 50943 Hs.247700 NM_014009 ENSG00000049768 FOXP3 AIID|DIETER|IPEX|JM2|PIDX|XPID forkhead box P3 protein-coding chr5-5882 chr5 11203429 11203639 + 7.66 0.000 intron (NM_001288715, intron 9 of 20) AluSz6|SINE|Alu 385383 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr1-10904 chr1 207960313 207960523 + 7.66 0.000 Intergenic Intergenic -49293 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr15-3356 chr15 83576963 83577173 + 7.66 0.000 intron (NM_001324185, intron 7 of 9) AluSc5|SINE|Alu -77055 NM_001301110 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr8-4816 chr8 17187250 17187460 + 7.66 0.000 intron (NM_016353, intron 3 of 12) L2c|LINE|L2 30191 NM_001362989 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr3-3535 chr3 42670345 42670555 + 7.66 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -15087 NM_152393 131377 Hs.350288 NM_152393 ENSG00000157119 KLHL40 KBTBD5|NEM8|SRYP|SYRP kelch like family member 40 protein-coding chr2-11387 chr2 215433663 215433873 + 7.66 0.000 intron (NM_212482, intron 2 of 45) intron (NM_212482, intron 2 of 45) 2300 NM_001365519 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr11-4212 chr11 63542546 63542756 + 7.66 0.000 intron (NM_004585, intron 2 of 3) intron (NM_004585, intron 2 of 3) 5843 NM_004585 5920 Hs.17466 NM_004585 ENSG00000133321 PLAAT4 HRASLS4|HRSL4|PLA1/2-3|PLAAT-4|RARRES3|RIG1|TIG3 phospholipase A and acyltransferase 4 protein-coding chr11-7240 chr11 9007813 9008023 + 7.66 0.000 Intergenic Intergenic -3917 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chrX-3756 chrX 128845033 128845243 + 7.66 0.000 Intergenic MSTD|LTR|ERVL-MaLR 678352 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr2-6134 chr2 225041054 225041264 + 7.66 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) 1309 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr17-6324 chr17 62963299 62963509 + 7.66 0.000 Intergenic Intergenic -2831 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr20-3519 chr20 64015967 64016177 + 7.66 0.000 intron (NM_012469, intron 11 of 20) AluJr|SINE|Alu -17655 NM_001348090 284739 Hs.97840 NM_207349 ENSG00000196421 C20orf204 LINC00176|NCRNA00176|PRR17 chromosome 20 open reading frame 204 protein-coding chr18-1921 chr18 33761389 33761599 + 7.66 0.000 Intergenic Intergenic 183275 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr2-5999 chr2 74522105 74522315 + 7.66 0.000 intron (NM_133637, intron 8 of 11) L2c|LINE|L2 4021 NM_133637 165545 Hs.191705 NM_133637 ENSG00000144045 DQX1 - DEAQ-box RNA dependent ATPase 1 protein-coding chr15-2039 chr15 51981547 51981757 + 7.66 0.000 Intergenic Intergenic -9851 NM_001323903 123169 Hs.567662 NM_138792 ENSG00000166477 LEO1 RDL LEO1 homolog, Paf1/RNA polymerase II complex component protein-coding chr1-8278 chr1 38778222 38778432 + 7.66 0.000 Intergenic MIR|SINE|MIR 81445 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr8-5192 chr8 104825610 104825820 + 7.66 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -236691 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr5-3839 chr5 116857302 116857512 + 7.66 0.000 Intergenic LTR49|LTR|ERV1 -95198 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr10-9020 chr10 122387532 122387742 + 7.66 0.000 intron (NM_001195608, intron 1 of 13) MLT1F|LTR|ERVL-MaLR 1568 NM_001195608 59338 Hs.643512 NM_021622 ENSG00000107679 PLEKHA1 TAPP1 pleckstrin homology domain containing A1 protein-coding chr6-5325 chr6 144285943 144286153 + 7.66 0.000 Intergenic CpG -5689 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr20-2627 chr20 42115304 42115514 + 7.66 0.000 intron (NM_133170, intron 22 of 31) intron (NM_133170, intron 22 of 31) -497032 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr15-4125 chr15 80250056 80250266 + 7.66 0.000 intron (NM_001352888, intron 1 of 2) intron (NM_001352888, intron 1 of 2) 2052 NM_001352888 100996492 Hs.20034 NM_001352888 ENSG00000259417 CTXND1 LINC01314 cortexin domain containing 1 protein-coding chr10-5412 chr10 76778956 76779166 + 7.66 0.000 Intergenic Intergenic -108983 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr1-5721 chr1 80085427 80085637 + 7.66 0.000 Intergenic MER101B|LTR|ERV1 -450223 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr1-15395 chr1 151292983 151293193 + 7.66 0.000 TTS (NM_001304763) TTS (NM_001304763) 10789 NM_020832 57592 Hs.186756 NM_020832 ENSG00000143373 ZNF687 PDB6 zinc finger protein 687 protein-coding chr21-1131 chr21 37965206 37965416 + 7.66 0.000 Intergenic MER76|LTR|ERVL -48854 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr14-3118 chr14 66419667 66419877 + 7.66 0.000 Intergenic L1PA17|LINE|L1 -66599 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr1-10300 chr1 150611438 150611648 + 7.66 0.000 Intergenic Intergenic 17590 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr22-3139 chr22 23574762 23574972 + 7.66 0.000 intron (NM_152855, intron 1 of 1) intron (NM_152855, intron 1 of 1) 5423 NM_001369906 3543 Hs.348935 NM_020070 ENSG00000128322 IGLL1 14.1|AGM2|CD179b|IGL1|IGL5|IGLJ14.1|IGLL|IGO|IGVPB|VPREB2 immunoglobulin lambda like polypeptide 1 protein-coding chr17-5784 chr17 62470770 62470980 + 7.66 0.000 Intergenic L2c|LINE|L2 -8243 NM_001330418 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr20-2829 chr20 59748369 59748579 + 7.66 0.000 intron (NM_080672, intron 3 of 12) intron (NM_080672, intron 3 of 12) 27264 NM_183244 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr1-7883 chr1 115289989 115290199 + 7.66 0.000 intron (NM_002506, intron 2 of 2) intron (NM_002506, intron 2 of 2) 7060 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr2-6116 chr2 216301266 216301476 + 7.66 0.000 intron (NM_020814, intron 1 of 3) intron (NM_020814, intron 1 of 3) 71112 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr8-5157 chr8 83370824 83371034 + 7.66 0.000 Intergenic Intergenic -32829 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr3-6356 chr3 85172478 85172688 + 7.66 0.000 intron (NM_001167674, intron 1 of 9) intron (NM_001167674, intron 1 of 9) -110319 NR_132777 106635529 NR_132777 SNORA95 - small nucleolar RNA, H/ACA box 95 snoRNA chr5-4600 chr5 31194630 31194840 + 7.66 0.000 intron (NM_001362435, intron 1 of 10) intron (NM_001362435, intron 1 of 10) 1049 NM_001362435 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr4-7122 chr4 36137822 36138032 + 7.66 0.000 intron (NR_146894, intron 19 of 32) intron (NR_146894, intron 19 of 32) 106012 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr12-5517 chr12 131609250 131609460 + 7.66 0.000 Intergenic Intergenic 38766 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chrX-2656 chrX 114208055 114208265 + 7.66 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -269942 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr12-8037 chr12 114047357 114047567 + 7.66 0.000 Intergenic LTR16|LTR|ERVL -81137 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr14-3357 chr14 91115408 91115618 + 7.66 0.000 intron (NM_001286471, intron 1 of 13) AluSz|SINE|Alu 813 NM_001286471 80017 Hs.309849 NM_024952 ENSG00000133943 DGLUCY C14orf159 D-glutamate cyclase protein-coding chr6-2192 chr6 36718140 36718350 + 7.66 0.000 intron (NM_001257357, intron 6 of 13) intron (NM_001257357, intron 6 of 13) 20419 NM_001257357 401258 Hs.485258 NM_207498 ENSG00000255587 RAB44 RASD3|RASL13|dJ431A14.3 RAB44, member RAS oncogene family protein-coding chr16-1530 chr16 58000539 58000749 + 7.66 0.000 promoter-TSS (NM_024598) promoter-TSS (NM_024598) -729 NM_024598 79650 Hs.408702 NM_024598 ENSG00000103005 USB1 C16orf57|HVSL1|Mpn1|PN|hUsb1 U6 snRNA biogenesis phosphodiesterase 1 protein-coding chr1-9244 chr1 23967152 23967362 + 7.66 0.000 non-coding (NR_034035, exon 7 of 7) non-coding (NR_034035, exon 7 of 7) 7429 NM_017761 55629 Hs.7862 NM_017761 ENSG00000189266 PNRC2 - proline rich nuclear receptor coactivator 2 protein-coding chr4-5641 chr4 7787385 7787595 + 7.66 0.000 intron (NM_198595, intron 11 of 16) MER21C|LTR|ERVL 33400 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr11-5451 chr11 73163861 73164071 + 7.66 0.000 Intergenic Intergenic -21648 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr13-1159 chr13 34412449 34412659 + 7.66 0.000 intron (NR_146542, intron 1 of 3) intron (NR_146542, intron 1 of 3) 64511 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr19-4557 chr19 10577074 10577284 + 7.66 0.000 intron (NM_001300887, intron 9 of 11) intron (NM_001300887, intron 9 of 11) -8200 NM_079421 1032 Hs.435051 NM_001800 ENSG00000129355 CDKN2D INK4D|p19|p19-INK4D cyclin dependent kinase inhibitor 2D protein-coding chr2-9563 chr2 240442946 240443156 + 7.66 0.000 intron (NM_002081, intron 1 of 8) intron (NM_002081, intron 1 of 8) 7388 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr7-9476 chr7 135245611 135245821 + 7.66 0.000 intron (NM_182489, intron 5 of 8) MamRep1879|DNA|hAT-Tip100? 13737 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr4-7457 chr4 69776293 69776503 + 7.66 0.000 Intergenic Intergenic -15778 NM_014465 27284 Hs.129742 NM_014465 ENSG00000173597 SULT1B1 ST1B1|ST1B2|SULT1B2 sulfotransferase family 1B member 1 protein-coding chr4-4833 chr4 109041679 109041889 + 7.66 0.000 intron (NM_198721, intron 4 of 36) MLT1J1|LTR|ERVL-MaLR 260874 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr11-7366 chr11 69568189 69568399 + 7.66 0.000 Intergenic Intergenic -72811 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr8-7282 chr8 130881963 130882173 + 7.66 0.000 intron (NM_001115, intron 8 of 17) intron (NM_001115, intron 8 of 17) 158841 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr14-5073 chr14 84283709 84283919 + 7.66 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -988118 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr4-4503 chr4 61121603 61121813 + 7.66 0.000 Intergenic L1MD3|LINE|L1 -21948 NR_147148 105377249 Hs.575120 NR_147148 ENSG00000240152 LINC02271 - long intergenic non-protein coding RNA 2271 ncRNA chr11-4519 chr11 117471750 117471960 + 7.66 0.000 intron (NM_020693, intron 15 of 32) intron (NM_020693, intron 15 of 32) 144001 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr16-3270 chr16 88579097 88579307 + 7.66 0.000 intron (NM_001294340, intron 2 of 18) intron (NM_001294340, intron 2 of 18) 8799 NM_001294340 124245 Hs.93670 NM_144604 ENSG00000158545 ZC3H18 NHN1 zinc finger CCCH-type containing 18 protein-coding chr2-7594 chr2 25712382 25712592 + 7.66 0.000 Intergenic L1M4|LINE|L1 -38813 NM_001256304 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr6-5763 chr6 161788245 161788455 + 7.66 0.000 intron (NM_004562, intron 6 of 11) intron (NM_004562, intron 6 of 11) 317373 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr16-5234 chr16 29951160 29951370 + 7.66 0.000 Intergenic L1M1|LINE|L1 -10814 NM_001369689 124446 Hs.460574 NM_194280 ENSG00000149932 TMEM219 IGFBP-3R transmembrane protein 219 protein-coding chr18-1588 chr18 37437799 37438009 + 7.66 0.000 intron (NM_001353724, intron 2 of 12) MLT1A|LTR|ERVL-MaLR 28600 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chrX-3355 chrX 139225479 139225689 + 7.66 0.000 Intergenic Intergenic -20561 NM_001139500 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr12-3326 chr12 87323475 87323685 + 7.66 0.000 Intergenic L2a|LINE|L2 -7159 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr17-7087 chr17 67926307 67926517 + 7.66 0.000 intron (NM_182641, intron 15 of 27) AluY|SINE|Alu 67194 NM_181655 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr11-6179 chr11 45075465 45075675 + 7.66 0.000 Intergenic Intergenic -18443 NM_001359633 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chrX-3285 chrX 103512373 103512583 + 7.66 0.000 intron (NM_080879, intron 2 of 2) MIR|SINE|MIR 7011 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chrX-5173 chrX 133052030 133052240 + 7.66 0.000 Intergenic Intergenic -23863 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding chr11-10722 chr11 131565320 131565530 + 7.66 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) -24558 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr8-5576 chr8 85087874 85088084 + 7.66 0.000 Intergenic THE1B|LTR|ERVL-MaLR -19259 NM_033402 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chrX-1151 chrX 41394724 41394934 + 7.66 0.000 Intergenic AluSz6|SINE|Alu -52631 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr9-6236 chr9 122783508 122783718 + 7.66 0.000 Intergenic L2|LINE|L2 -5320 NM_001001923 392391 Hs.534761 NM_001001923 ENSG00000148215 OR5C1 OR5C2P|OR9-31|OR9-F olfactory receptor family 5 subfamily C member 1 protein-coding chr22-2534 chr22 25319238 25319448 + 7.66 0.000 intron (NR_029395, intron 2 of 2) intron (NR_029395, intron 2 of 2) 1086 NR_029395 91353 Hs.651077 NM_001013618 IGLL3P 16.1|IGLL3 immunoglobulin lambda like polypeptide 3, pseudogene pseudo KI270711.1-2 KI270711.1 24227 24437 + 7.66 0.000 NA NA NA NA chr17-7538 chr17 18089005 18089215 + 7.66 0.000 intron (NM_001388, intron 1 of 12) intron (NM_001388, intron 1 of 12) 1162 NM_001388 1819 Hs.78582 NM_001388 ENSG00000108591 DRG2 - developmentally regulated GTP binding protein 2 protein-coding chr11-5037 chr11 89098164 89098374 + 7.66 0.000 Intergenic Intergenic -34591 NM_000842 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr10-2915 chr10 133159332 133159542 + 7.66 0.000 promoter-TSS (NM_152643) promoter-TSS (NM_152643) -782 NM_001347865 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr3-5005 chr3 23406793 23407003 + 7.66 0.000 intron (NM_001370225, intron 3 of 5) intron (NM_001370225, intron 3 of 5) 203571 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr2-3450 chr2 111725822 111726032 + 7.66 0.000 Intergenic Intergenic 45207 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr11-8097 chr11 42610931 42611141 + 7.66 0.000 Intergenic Intergenic -357346 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr11-5336 chr11 61760670 61760880 + 7.66 0.000 intron (NM_013279, intron 1 of 25) MIRb|SINE|MIR -3111 NR_026882 26070 Hs.564254 NR_026882 ENSG00000124915 MYRF-AS1 DKFZP434K028 MYRF antisense RNA 1 ncRNA chr18-1682 chr18 75866032 75866242 + 7.66 0.000 Intergenic Intergenic -153734 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chr3-10146 chr3 114870320 114870530 + 7.66 0.000 intron (NM_001348805, intron 4 of 10) intron (NM_001348805, intron 4 of 10) -2608 NR_126422 104413890 Hs.612732 NR_126422 ENSG00000239946 ZBTB20-AS3 - ZBTB20 antisense RNA 3 ncRNA chr2-4883 chr2 120225913 120226123 + 7.66 0.000 Intergenic Intergenic -2618 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr19-4163 chr19 38501129 38501339 + 7.66 0.000 intron (NM_001042723, intron 47 of 104) AluSg|SINE|Alu 67534 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr11-2772 chr11 67262805 67263015 + 7.66 0.000 Intergenic L2b|LINE|L2 -3563 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr12-6564 chr12 120833824 120834034 + 7.66 0.000 intron (NM_139015, intron 1 of 10) intron (NM_139015, intron 1 of 10) 70429 NM_139015 121665 Hs.507087 NM_139015 ENSG00000157837 SPPL3 IMP2|MDHV1887|PRO4332|PSH1|PSL4 signal peptide peptidase like 3 protein-coding chr20-701 chr20 18587824 18588034 + 7.66 0.000 promoter-TSS (NM_001318043) promoter-TSS (NM_001318043) -125 NM_080820 92675 Hs.659442 NM_080820 ENSG00000125821 DTD1 C20orf88|DTD|DUE-B|DUEB|HARS2|pqn-68 D-aminoacyl-tRNA deacylase 1 protein-coding chr6-4354 chr6 19086633 19086843 + 7.66 0.000 intron (NR_110860, intron 9 of 10) intron (NR_110860, intron 9 of 10) 93742 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr15-3954 chr15 41991491 41991701 + 7.66 0.000 intron (NM_001206670, intron 13 of 19) L2b|LINE|L2 18833 NR_120334 101928388 Hs.738043 NR_120334 ENSG00000246740 PLA2G4E-AS1 - PLA2G4E antisense RNA 1 ncRNA chr5-5923 chr5 61588405 61588615 + 7.66 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -49250 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr4-5659 chr4 10646864 10647074 + 7.66 0.000 intron (NM_052964, intron 2 of 18) intron (NM_052964, intron 2 of 18) 37799 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr4-6132 chr4 25978332 25978542 + 7.66 0.000 Intergenic Intergenic 64245 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr5-8511 chr5 133849123 133849333 + 7.66 0.000 Intergenic Intergenic -64449 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr17-5917 chr17 74736512 74736722 + 7.66 0.000 promoter-TSS (NM_001163989) promoter-TSS (NM_001163989) 57 NM_001330471 326624 Hs.351413 NM_175738 ENSG00000172794 RAB37 - RAB37, member RAS oncogene family protein-coding chr17-3054 chr17 80560234 80560444 + 7.66 0.000 intron (NM_020761, intron 1 of 33) intron (NM_020761, intron 1 of 33) 15501 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr15-3250 chr15 75360117 75360327 + 7.66 0.000 intron (NM_001256496, intron 11 of 23) intron (NM_001256496, intron 11 of 23) -6537 NR_030360 693216 NR_030360 ENSG00000284343 MIR631 MIRN631|hsa-mir-631 microRNA 631 ncRNA chr10-6035 chr10 126741830 126742040 + 7.66 0.000 Intergenic Intergenic -71425 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr4-8067 chr4 122243431 122243641 + 7.66 0.000 intron (NM_015312, intron 28 of 83) AluSz6|SINE|Alu 72933 NM_015312 84162 Hs.408142 NM_015312 ENSG00000138688 KIAA1109 ALKKUCS|FSA|Tweek KIAA1109 protein-coding chr14-2311 chr14 75845261 75845471 + 7.66 0.000 intron (NM_015072, intron 28 of 31) intron (NM_015072, intron 28 of 31) 136629 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr4-2739 chr4 7308963 7309173 + 7.66 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -1382 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr2-13067 chr2 110217796 110218006 + 7.66 0.000 intron (NM_001355251, intron 3 of 8) LTR7|LTR|ERV1 -12888 NM_001128178 4867 Hs.280388 NM_000272 ENSG00000144061 NPHP1 JBTS4|NPH1|SLSN1 nephrocystin 1 protein-coding chr12-6927 chr12 25189922 25190132 + 7.66 0.000 intron (NM_001204102, intron 2 of 16) MER102b|DNA|hAT-Charlie 5133 NM_001352064 55259 Hs.407771 NM_018272 ENSG00000118307 CASC1 LAS1|PPP1R54 cancer susceptibility 1 protein-coding chr6-1369 chr6 73580622 73580832 + 7.66 0.000 Intergenic Intergenic -59695 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr4-4294 chr4 26509788 26509998 + 7.66 0.000 Intergenic Intergenic -19409 NM_000730 886 Hs.129 NM_000730 ENSG00000163394 CCKAR CCK-A|CCK1-R|CCK1R|CCKRA cholecystokinin A receptor protein-coding chr5-4862 chr5 64566921 64567131 + 7.66 0.000 intron (NM_001029875, intron 2 of 5) LTR43|LTR|ERV1 -8624 NM_001271891 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr21-622 chr21 39750491 39750701 + 7.66 0.000 intron (NM_001080444, intron 2 of 8) intron (NM_001080444, intron 2 of 8) 5189 NM_001080444 150084 Hs.422120 NM_001080444 ENSG00000183067 IGSF5 GSF5|JAM4 immunoglobulin superfamily member 5 protein-coding chr12-7696 chr12 90126243 90126453 + 7.66 0.000 Intergenic L1PA13|LINE|L1 -166970 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr11-5644 chr11 122616753 122616963 + 7.66 0.000 Intergenic Intergenic -38864 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr17-6236 chr17 19862353 19862563 + 7.66 0.000 intron (NM_014683, intron 3 of 26) intron (NM_014683, intron 3 of 26) 5478 NM_001142610 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr2-14754 chr2 240055030 240055240 + 7.66 0.000 Intergenic L2a|LINE|L2 -9063 NM_173351 150681 Hs.626616 NM_173351 ENSG00000178586 OR6B3 OR6B3P|OR6B3Q olfactory receptor family 6 subfamily B member 3 protein-coding chr15-5039 chr15 84031312 84031522 + 7.66 0.000 exon (NM_001301110, exon 28 of 30) exon (NM_001301110, exon 28 of 30) -48770 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr12-4021 chr12 41109254 41109464 + 7.66 0.000 Intergenic Intergenic -78961 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr18-1237 chr18 48924590 48924800 + 7.66 0.000 intron (NM_001190822, intron 3 of 3) intron (NM_001190822, intron 3 of 3) 18112 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr1-9816 chr1 59908830 59909040 + 7.66 0.000 intron (NM_000775, intron 5 of 8) intron (NM_000775, intron 5 of 8) 17838 NM_000775 1573 Hs.152096 NM_000775 ENSG00000134716 CYP2J2 CPJ2|CYPIIJ2 cytochrome P450 family 2 subfamily J member 2 protein-coding chr13-1906 chr13 49764755 49764965 + 7.66 0.000 intron (NM_002267, intron 1 of 16) L2|LINE|L2 27822 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr2-8643 chr2 146351598 146351808 + 7.66 0.000 Intergenic L1ME1|LINE|L1 -235354 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr5-3471 chr5 170310046 170310256 + 7.66 0.000 non-coding (NR_147701, exon 2 of 2) non-coding (NR_147701, exon 2 of 2) 2565 NR_147701 100128059 Hs.587351 NR_147701 ENSG00000250274 LOC100128059 - uncharacterized LOC100128059 ncRNA chr20-2516 chr20 34388331 34388541 + 7.66 0.000 intron (NM_001257137, intron 2 of 25) AluJb|SINE|Alu 25163 NM_031483 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr14-4018 chr14 44176020 44176230 + 7.66 0.000 Intergenic Intergenic 331158 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chrX-4195 chrX 35155282 35155492 + 7.66 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR 212591 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chrX-3607 chrX 84248410 84248620 + 7.66 0.000 Intergenic MER44B|DNA|TcMar-Tigger -22687 NR_031690 100302191 NR_031690 ENSG00000221494 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA chr2-7848 chr2 48076038 48076248 + 7.66 0.000 Intergenic MIRb|SINE|MIR -170350 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr5-5766 chr5 173139802 173140012 + 7.66 0.000 TTS (NM_153607) TTS (NM_153607) -4624 NM_013980 662 Hs.145726 NM_001205 ENSG00000113734 BNIP1 NIP1|SEC20|TRG-8 BCL2 interacting protein 1 protein-coding chr5-6016 chr5 151288109 151288319 + 7.66 0.000 intron (NM_181774, intron 5 of 9) L3|LINE|CR1 15552 NM_001145017 285641 Hs.720893 NM_181774 ENSG00000186334 SLC36A3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 member 3 protein-coding chr22-3195 chr22 36595257 36595467 + 7.66 0.000 intron (NM_006078, intron 1 of 3) MER63A|DNA|hAT-Blackjack -66196 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr2-10539 chr2 235797494 235797704 + 7.66 0.000 intron (NM_001037131, intron 6 of 17) MLT1J|LTR|ERVL-MaLR -279678 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr15-4737 chr15 68442291 68442501 + 7.66 0.000 Intergenic MIRc|SINE|MIR -10233 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr18-3146 chr18 40659840 40660050 + 7.66 0.000 Intergenic MLT2F|LTR|ERVL 593659 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr17-3266 chr17 35726549 35726759 + 7.66 0.000 TTS (NM_001282) TTS (NM_001282) -4985 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr19-2015 chr19 47492794 47493004 + 7.66 0.000 intron (NR_038457, intron 5 of 8) intron (NR_038457, intron 5 of 8) 8617 NR_038452 100505681 Hs.657320 NR_038452 ENSG00000268061 NAPA-AS1 - NAPA antisense RNA 1 ncRNA chrX-4178 chrX 33937510 33937720 + 7.66 0.000 Intergenic THE1D|LTR|ERVL-MaLR 194715 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr10-4924 chr10 23458041 23458251 + 7.66 0.000 Intergenic LTR26D|LTR|ERV1 18877 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr4-2635 chr4 155305249 155305459 + 7.66 0.000 Intergenic Intergenic -48862 NR_125937 102724776 Hs.61271 NR_125937 ENSG00000250910 LOC102724776 - uncharacterized LOC102724776 ncRNA chr3-4073 chr3 98918404 98918614 + 7.66 0.000 Intergenic Intergenic -16814 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr1-5597 chr1 8889445 8889655 + 7.66 0.000 Intergenic L3|LINE|CR1 10715 NR_038351 100505975 Hs.429843 NR_038351 ENSG00000230679 ENO1-AS1 - ENO1 antisense RNA 1 ncRNA chr2-6520 chr2 199440325 199440535 + 7.66 0.000 intron (NM_001172509, intron 2 of 10) intron (NM_001172509, intron 2 of 10) 17509 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr12-6470 chr12 98912060 98912270 + 7.66 0.000 intron (NM_152788, intron 17 of 25) MIR|SINE|MIR -16874 NM_001352208 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr2-2690 chr2 20755272 20755482 + 7.66 0.000 intron (NM_021925, intron 4 of 6) L2a|LINE|L2 67724 NM_021925 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr18-2411 chr18 9142086 9142296 + 7.66 0.000 intron (NM_001204056, intron 1 of 11) intron (NM_001204056, intron 1 of 11) 4628 NM_001204056 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding chr4-3918 chr4 153486103 153486313 + 7.66 0.000 intron (NM_001131007, intron 3 of 34) intron (NM_001131007, intron 3 of 34) 19848 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr8-4756 chr8 142879362 142879572 + 7.66 0.000 intron (NM_001026213, intron 1 of 7) intron (NM_001026213, intron 1 of 7) 353 NM_001026213 1584 Hs.184927 NM_000497 ENSG00000160882 CYP11B1 CPN1|CYP11B|FHI|P450C11 cytochrome P450 family 11 subfamily B member 1 protein-coding chr2-14315 chr2 217606782 217606992 + 7.66 0.000 intron (NR_026597, intron 1 of 12) MIR3|SINE|MIR 149706 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr11-10290 chr11 105432151 105432361 + 7.66 0.000 Intergenic MSTB|LTR|ERVL-MaLR -177817 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr15-3516 chr15 99566859 99567069 + 7.66 0.000 intron (NM_001352616, intron 1 of 10) intron (NM_001352616, intron 1 of 10) 481 NM_001352616 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr6-7446 chr6 55484894 55485104 + 7.66 0.000 intron (NR_109869, intron 3 of 4) L2a|LINE|L2 94215 NR_109867 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding KI270772.1-4 KI270772.1 35143 35353 + 7.66 0.000 NA NA NA NA chr15-5120 chr15 89672515 89672725 + 7.66 0.000 intron (NM_001145311, intron 3 of 8) intron (NM_001145311, intron 3 of 8) 6747 NM_001145311 5346 Hs.103253 NM_002666 ENSG00000166819 PLIN1 FPLD4|PERI|PLIN perilipin 1 protein-coding chr10-3084 chr10 11899652 11899862 + 7.66 0.000 Intergenic Intergenic -5047 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr17-7069 chr17 65346366 65346576 + 7.66 0.000 Intergenic Intergenic -111070 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr12-7922 chr12 108570839 108571049 + 7.66 0.000 Intergenic Intergenic 9481 NR_135127 23479 Hs.615131 NM_014301 ENSG00000136003 ISCU 2310020H20Rik|HML|ISU2|NIFU|NIFUN|hnifU iron-sulfur cluster assembly enzyme protein-coding chr6-5284 chr6 139314039 139314249 + 7.66 0.000 Intergenic MER4D|LTR|ERV1 -22146 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding chr3-6863 chr3 151109890 151110100 + 7.66 0.000 intron (NM_053002, intron 1 of 42) intron (NM_053002, intron 1 of 42) 23197 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr6-3024 chr6 52399966 52400176 + 7.66 0.000 intron (NM_133367, intron 1 of 1) (TC)n|Simple_repeat|Simple_repeat -20271 NM_018100 114327 Hs.403171 NM_018100 ENSG00000096093 EFHC1 EJM1|dJ304B14.2 EF-hand domain containing 1 protein-coding chr17-8175 chr17 61495179 61495389 + 7.66 0.000 Intergenic Intergenic 38796 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr10-3331 chr10 8210401 8210611 + 7.66 0.000 Intergenic AluJr|SINE|Alu 57799 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chr8-5872 chr8 14864840 14865050 + 7.66 0.000 intron (NM_139167, intron 1 of 7) L1M2|LINE|L1 -11435 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr10-5469 chr10 79333685 79333895 + 7.66 0.000 Intergenic L1ME2|LINE|L1 -13679 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr1-8943 chr1 8428775 8428985 + 7.66 0.000 intron (NR_125999, intron 2 of 3) intron (NR_125999, intron 2 of 3) 4235 NR_125999 102724552 Hs.568612 NR_125999 RERE-AS1 - RERE antisense RNA 1 ncRNA chr21-452 chr21 45480862 45481072 + 7.66 0.000 intron (NM_130445, intron 13 of 42) intron (NM_130445, intron 13 of 42) 2701 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr20-1957 chr20 33655829 33656039 + 7.66 0.000 Intergenic AluSx|SINE|Alu -6393 NM_080825 128864 Hs.324104 NM_080825 ENSG00000149609 C20orf144 dJ63M2.6 chromosome 20 open reading frame 144 protein-coding chr19-3420 chr19 17839902 17840112 + 7.66 0.000 intron (NM_000215, intron 9 of 23) AluSc|SINE|Alu 8025 NM_000215 3718 Hs.515247 NM_000215 ENSG00000105639 JAK3 JAK-3|JAK3_HUMAN|JAKL|L-JAK|LJAK Janus kinase 3 protein-coding chr19-1891 chr19 43827375 43827585 + 7.66 0.000 intron (NM_181845, intron 1 of 6) intron (NM_181845, intron 1 of 6) 159 NM_181845 284349 Hs.652513 NM_181845 ENSG00000167637 ZNF283 HZF19|HZF41 zinc finger protein 283 protein-coding chr4-3603 chr4 7447021 7447231 + 7.66 0.000 intron (NM_020777, intron 2 of 26) MLT1C|LTR|ERVL-MaLR -12196 NM_001085382 768239 Hs.662523 NM_001085382 ENSG00000178597 PSAPL1 - prosaposin like 1 (gene/pseudogene) protein-coding chr4-5620 chr4 3322130 3322340 + 7.66 0.000 intron (NM_002926, intron 2 of 16) intron (NM_002926, intron 2 of 16) 8088 NM_002926 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr18-1614 chr18 46324720 46324930 + 7.66 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -9193 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr10-8186 chr10 71597779 71597989 + 7.66 0.000 intron (NM_052836, intron 9 of 12) intron (NM_052836, intron 9 of 12) -85964 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr10-2486 chr10 31771265 31771475 + 7.66 0.000 Intergenic Intergenic 137556 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr17-6609 chr17 59506246 59506456 + 7.66 0.000 intron (NR_110813, intron 1 of 2) ERV3-16A3_LTR|LTR|ERVL 20506 NR_110813 101927728 Hs.569720 NR_110813 ENSG00000265313 LINC01476 - long intergenic non-protein coding RNA 1476 ncRNA chr4-1991 chr4 822599 822809 + 7.66 0.000 intron (NM_006651, intron 2 of 3) intron (NM_006651, intron 2 of 3) 3425 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr7-4077 chr7 15891524 15891734 + 7.66 0.000 Intergenic Intergenic 203251 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr11-10560 chr11 121661918 121662128 + 7.66 0.000 Intergenic Intergenic 209709 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr3-5538 chr3 2036206 2036416 + 7.66 0.000 Intergenic MER66B|LTR|ERV1 -62492 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr4-8736 chr4 184903791 184904001 + 7.66 0.000 Intergenic Intergenic -4435 NR_039975 100506229 Hs.378150 NR_039975 LINC01093 - long intergenic non-protein coding RNA 1093 ncRNA chr17-7712 chr17 32522653 32522863 + 7.66 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 35765 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr18-1717 chr18 3014622 3014832 + 7.66 0.000 Intergenic Intergenic -2780 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr10-4517 chr10 91551813 91552023 + 7.66 0.000 intron (NR_024467, intron 1 of 4) intron (NR_024467, intron 1 of 4) 59542 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr17-7606 chr17 22460067 22460277 + 7.66 0.000 Intergenic Intergenic 54153 NR_027084 284124 Hs.310247 NR_027084 ENSG00000276399 FLJ36000 - uncharacterized FLJ36000 ncRNA chrX-1352 chrX 139986826 139987036 + 7.66 0.000 Intergenic AluSx|SINE|Alu -21410 NM_001013403 347487 Hs.121384 NM_001013403 ENSG00000203933 CXorf66 SGPX chromosome X open reading frame 66 protein-coding chr1-7094 chr1 195098278 195098488 + 7.66 0.000 Intergenic L1PA13|LINE|L1 990332 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr5-7070 chr5 172493598 172493808 + 7.66 0.000 Intergenic Intergenic -39178 NM_001017995 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr2-4806 chr2 47323114 47323324 + 7.66 0.000 intron (NR_110207, intron 1 of 2) intron (NR_110207, intron 1 of 2) -12096 NR_001568 618 NR_001568 ENSG00000236824 BCYRN1 BC200|BC200a|LINC00004|NCRNA00004 brain cytoplasmic RNA 1 ncRNA chr1-10094 chr1 95700533 95700743 + 7.66 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 190522 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA chr6-6169 chr6 4933873 4934083 + 7.66 0.000 intron (NM_001368126, intron 2 of 6) L1ME4b|LINE|L1 43938 NM_001143971 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr3-5410 chr3 161655902 161656112 + 7.66 0.000 Intergenic L1PA8|LINE|L1 159199 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr10-5359 chr10 72335605 72335815 + 7.66 0.000 non-coding (NR_157570, exon 8 of 9) non-coding (NR_157570, exon 8 of 9) 19209 NM_001365081 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr6-3995 chr6 115198520 115198730 + 7.66 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 445210 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr10-9061 chr10 124824048 124824258 + 7.66 0.000 intron (NM_032182, intron 4 of 8) AluJr4|SINE|Alu 22334 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr7-8911 chr7 94244985 94245195 + 7.66 0.000 Intergenic Intergenic 147102 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr8-5659 chr8 112124416 112124626 + 7.66 0.000 Intergenic L2a|LINE|L2 -518972 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr1-9618 chr1 45985432 45985642 + 7.66 0.000 intron (NM_001324320, intron 5 of 29) L1ME1|LINE|L1 121189 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr20-3595 chr20 4750137 4750347 + 7.66 0.000 Intergenic L2b|LINE|L2 -9574 NR_024268 149830 Hs.126516 NM_177549 ENSG00000180259 PRNT M8 prion locus lncRNA, testis expressed ncRNA chr2-8326 chr2 107569322 107569532 + 7.66 0.000 Intergenic Intergenic 40008 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA chr12-6606 chr12 126811652 126811862 + 7.66 0.000 Intergenic Intergenic -39495 NR_033878 387895 Hs.534660 NR_033878 LINC00944 - long intergenic non-protein coding RNA 944 ncRNA chr7-5110 chr7 4003788 4003998 + 7.66 0.000 intron (NM_152744, intron 14 of 44) intron (NM_152744, intron 14 of 44) -125792 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr22-4274 chr22 49215207 49215417 + 7.66 0.000 Intergenic Intergenic 328154 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr11-5855 chr11 9501154 9501364 + 7.66 0.000 exon (NM_003442, exon 11 of 16) exon (NM_003442, exon 11 of 16) 40247 NM_003442 7702 Hs.523471 NM_003442 ENSG00000166478 ZNF143 SBF|STAF|pHZ-1 zinc finger protein 143 protein-coding chr12-2738 chr12 23950768 23950978 + 7.66 0.000 exon (NM_001261415, exon 1 of 15) exon (NM_001261415, exon 1 of 15) 159 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr15-4503 chr15 51843000 51843210 + 7.66 0.000 intron (NM_014547, intron 1 of 9) intron (NM_014547, intron 1 of 9) 13452 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr2-7416 chr2 9495814 9496024 + 7.66 0.000 intron (NM_003183, intron 14 of 18) FLAM_C|SINE|Alu 20864 NM_001320858 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr3-10331 chr3 127087382 127087592 + 7.66 0.000 Intergenic Intergenic 98893 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr6-5354 chr6 149235142 149235352 + 7.66 0.000 intron (NM_001292035, intron 2 of 6) L3|LINE|CR1 17321 NM_001292035 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr11-9852 chr11 72756754 72756964 + 7.66 0.000 intron (NM_006645, intron 5 of 6) L2|LINE|L2 -4470 NM_001040118 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr9-7003 chr9 114448764 114448974 + 7.66 0.000 intron (NM_001083885, intron 3 of 11) MLT1G3|LTR|ERVL-MaLR -22701 NM_001346890 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr6-6603 chr6 146455731 146455941 + 7.66 0.000 Intergenic HERVH-int|LTR|ERV1 -87997 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr11-6026 chr11 25978745 25978955 + 7.66 0.000 Intergenic L1ME1|LINE|L1 -210273 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr20-3178 chr20 44532893 44533103 + 7.66 0.000 intron (NM_007066, intron 1 of 3) L2c|LINE|L2 1123 NM_007066 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr2-8239 chr2 97830378 97830588 + 7.66 0.000 intron (NM_015348, intron 11 of 40) intron (NM_015348, intron 11 of 40) 96077 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr12-4314 chr12 131264144 131264354 + 7.66 0.000 Intergenic Intergenic 33723 NR_135045 107161159 Hs.730119 NR_135045 ENSG00000248703 LINC02415 - long intergenic non-protein coding RNA 2415 ncRNA chr4-6908 chr4 14928898 14929108 + 7.66 0.000 intron (NR_038857, intron 7 of 7) L2a|LINE|L2 -40834 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr2-2277 chr2 26486145 26486355 + 7.66 0.000 intron (NM_194248, intron 11 of 46) (ATGG)n|Simple_repeat|Simple_repeat -8126 NM_194322 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr1-15447 chr1 153993709 153993919 + 7.66 0.000 intron (NM_001159484, intron 36 of 37) AluSx1|SINE|Alu 3052 NM_001030 6232 Hs.546291 NM_001030 ENSG00000177954 RPS27 DBA17|MPS-1|MPS1|S27 ribosomal protein S27 protein-coding chr17-4469 chr17 60909456 60909666 + 7.66 0.000 intron (NM_001330413, intron 11 of 25) intron (NM_001330413, intron 11 of 25) 231710 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr1-16222 chr1 209143894 209144104 + 7.66 0.000 Intergenic Intergenic 171545 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr6-7534 chr6 68962009 68962219 + 7.66 0.000 intron (NM_001704, intron 8 of 31) intron (NM_001704, intron 8 of 31) 326832 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr11-3602 chr11 66529941 66530151 + 7.66 0.000 intron (NM_024649, intron 14 of 16) intron (NM_024649, intron 14 of 16) 16002 NM_207340 254359 Hs.209587 NM_207340 ENSG00000174165 ZDHHC24 - zinc finger DHHC-type containing 24 protein-coding chr10-3582 chr10 85937513 85937723 + 7.66 0.000 intron (NM_017551, intron 4 of 15) L2c|LINE|L2 327170 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr2-14020 chr2 191738730 191738940 + 7.66 0.000 Intergenic Intergenic 48654 NR_131917 105747689 Hs.104972 NR_131917 LOC105747689 - uncharacterized LOC105747689 ncRNA chr6-6575 chr6 137622207 137622417 + 7.66 0.000 Intergenic L2a|LINE|L2 -43334 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr4-5087 chr4 147034367 147034577 + 7.66 0.000 Intergenic Intergenic -88586 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr6-7790 chr6 97710025 97710235 + 7.66 0.000 Intergenic Intergenic -314401 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr14-2059 chr14 66183446 66183656 + 7.66 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -302820 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr2-5848 chr2 237840166 237840376 + 7.66 0.000 intron (NM_001080504, intron 15 of 15) L1PA15|LINE|L1 -19352 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr3-7300 chr3 14803620 14803830 + 7.66 0.000 intron (NR_135245, intron 1 of 2) intron (NR_135245, intron 1 of 2) 7689 NR_135245 152274 Hs.434128 NR_135245 ENSG00000260902 LINC02011 - long intergenic non-protein coding RNA 2011 ncRNA chr3-3074 chr3 131903887 131904097 + 7.66 0.000 intron (NM_130808, intron 2 of 15) intron (NM_130808, intron 2 of 15) 81939 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr12-8084 chr12 117524849 117525059 + 7.66 0.000 exon (NM_173598, exon 14 of 20) exon (NM_173598, exon 14 of 20) -163152 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr14-3824 chr14 72690608 72690818 + 7.66 0.000 intron (NM_001280544, intron 7 of 9) intron (NM_001280544, intron 7 of 9) 173893 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr4-4953 chr4 128649830 128650040 + 7.66 0.000 Intergenic Intergenic -159765 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr4-2892 chr4 78938418 78938628 + 7.66 0.000 intron (NR_146465, intron 1 of 6) L2c|LINE|L2 915 NM_001040202 152559 Hs.657312 NM_177453 ENSG00000163291 PAQR3 RKTG progestin and adipoQ receptor family member 3 protein-coding chr1-9560 chr1 41582366 41582576 + 7.66 0.000 exon (NM_001127714, exon 3 of 8) exon (NM_001127714, exon 3 of 8) -97788 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr11-5084 chr11 115222499 115222709 + 7.66 0.000 intron (NM_001098517, intron 5 of 8) intron (NM_001098517, intron 5 of 8) -110973 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chrX-2561 chrX 101229198 101229408 + 7.66 0.000 intron (NM_001939, intron 2 of 23) intron (NM_001939, intron 2 of 23) 9359 NM_001171184 1821 Hs.159291 NM_001939 ENSG00000102385 DRP2 DRP-2 dystrophin related protein 2 protein-coding chr3-7119 chr3 183586427 183586637 + 7.66 0.000 Intergenic Intergenic -30826 NM_130446 89857 Hs.659147 NM_130446 ENSG00000172578 KLHL6 - kelch like family member 6 protein-coding chr6-3166 chr6 118758052 118758262 + 7.66 0.000 Intergenic MLT2B2|LTR|ERVL -24551 NR_037662 100287632 Hs.334026 NR_037662 SELENOKP3 - selenoprotein K pseudogene 3 pseudo chr3-5067 chr3 42467821 42468031 + 7.66 0.000 Intergenic MSTA|LTR|ERVL-MaLR -21373 NM_001251882 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr1-11475 chr1 107776359 107776569 + 7.66 0.000 intron (NM_006113, intron 4 of 26) L2a|LINE|L2 -87965 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr2-13666 chr2 162581938 162582148 + 7.66 0.000 intron (NM_033272, intron 2 of 15) intron (NM_033272, intron 2 of 15) -186893 NR_110258 101929570 Hs.470445 NR_110258 ENSG00000237750 LOC101929570 - uncharacterized LOC101929570 ncRNA chr4-4560 chr4 74097786 74097996 + 7.66 0.000 intron (NM_002089, intron 3 of 3) intron (NM_002089, intron 3 of 3) 1304 NM_002089 2920 Hs.75765 NM_002089 ENSG00000081041 CXCL2 CINC-2a|GRO2|GROb|MGSA-b|MIP-2a|MIP2|MIP2A|SCYB2 C-X-C motif chemokine ligand 2 protein-coding chr5-6453 chr5 168086999 168087209 + 7.66 0.000 intron (NM_001368145, intron 6 of 26) intron (NM_001368145, intron 6 of 26) -78741 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr18-1108 chr18 68735797 68736007 + 7.66 0.000 intron (NM_001093729, intron 3 of 9) intron (NM_001093729, intron 3 of 9) 20686 NM_001093729 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr3-5425 chr3 169772706 169772916 + 7.66 0.000 promoter-TSS (NR_033702) promoter-TSS (NR_033702) -585 NM_001185118 55892 Hs.507025 NM_018657 ENSG00000085274 MYNN OSZF|SBBIZ1|ZBTB31|ZNF902 myoneurin protein-coding chr17-3656 chr17 7627056 7627266 + 7.66 0.000 promoter-TSS (NM_001289115) promoter-TSS (NM_001289115) 660 NM_001320847 112483 Hs.10846 NM_133491 ENSG00000141504 SAT2 SSAT2 spermidine/spermine N1-acetyltransferase family member 2 protein-coding chr15-2388 chr15 58830666 58830876 + 7.66 0.000 intron (NM_001040450, intron 5 of 8) Tigger17a|DNA|TcMar-Tigger 59469 NM_001040450 54629 Hs.591122 NM_019092 ENSG00000128923 MINDY2 FAM63B MINDY lysine 48 deubiquitinase 2 protein-coding chr2-10916 chr2 72969870 72970080 + 7.66 0.000 intron (NR_138476, intron 11 of 14) intron (NR_138476, intron 11 of 14) 52456 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr4-7186 chr4 40956763 40956973 + 7.66 0.000 intron (NM_004307, intron 6 of 17) intron (NM_004307, intron 6 of 17) -99676 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr12-6375 chr12 65283303 65283513 + 7.66 0.000 intron (NM_001193461, intron 1 of 6) intron (NM_001193461, intron 1 of 6) 4421 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr2-5336 chr2 85665686 85665896 + 7.66 0.000 exon (NM_000542, exon 5 of 11) exon (NM_000542, exon 5 of 11) 2408 NM_001367281 6439 Hs.512690 NM_000542 ENSG00000168878 SFTPB PSP-B|SFTB3|SFTP3|SMDP1|SP-B surfactant protein B protein-coding chr16-4747 chr16 84715795 84716005 + 7.66 0.000 intron (NM_001272075, intron 2 of 14) MLT1L|LTR|ERVL-MaLR 15900 NR_073577 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr5-4302 chr5 151070603 151070813 + 7.66 0.000 intron (NM_001252390, intron 1 of 17) intron (NM_001252390, intron 1 of 17) -5577 NM_001258456 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr14-2458 chr14 81430960 81431170 + 7.66 0.000 intron (NM_001366850, intron 1 of 7) intron (NM_001366850, intron 1 of 7) -3290 NM_001256430 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr11-10439 chr11 116558550 116558760 + 7.66 0.000 Intergenic Intergenic -80767 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr4-5720 chr4 41423902 41424112 + 7.66 0.000 intron (NM_001289122, intron 1 of 25) intron (NM_001289122, intron 1 of 25) 63200 NM_001330784 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr8-5937 chr8 19175780 19175990 + 7.66 0.000 Intergenic Intergenic 69637 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr2-13985 chr2 190050199 190050409 + 7.66 0.000 Intergenic MER57C2|LTR|ERV1 12425 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr1-9329 chr1 27937340 27937550 + 7.66 0.000 intron (NM_001009568, intron 1 of 6) intron (NM_001009568, intron 1 of 6) 2445 NM_001304579 27293 Hs.123659 NM_014474 ENSG00000130768 SMPDL3B ASML3B sphingomyelin phosphodiesterase acid like 3B protein-coding chr1-6743 chr1 67198263 67198473 + 7.66 0.000 intron (NM_144701, intron 4 of 10) intron (NM_144701, intron 4 of 10) 31914 NM_144701 149233 Hs.677426 NM_144701 ENSG00000162594 IL23R - interleukin 23 receptor protein-coding chrX-1009 chrX 44649698 44649908 + 7.66 0.000 Intergenic Intergenic -106944 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr10-4337 chr10 28542015 28542225 + 7.66 0.000 intron (NM_100486, intron 3 of 12) L2a|LINE|L2 9002 NM_100486 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr20-2279 chr20 3897196 3897406 + 7.66 0.000 intron (NM_001324191, intron 2 of 7) intron (NM_001324191, intron 2 of 7) 7485 NM_001324193 80025 Hs.114180 NM_024960 ENSG00000125779 PANK2 C20orf48|HARP|HSS|NBIA1|PKAN pantothenate kinase 2 protein-coding chr5-9102 chr5 172926829 172927039 + 7.66 0.000 intron (NM_001031711, intron 7 of 9) MIRc|SINE|MIR 11851 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr5-4432 chr5 1667035 1667245 + 7.66 0.000 Intergenic CpG -33135 NR_003713 728613 Hs.720393 NR_003713 LOC728613 - programmed cell death 6 pseudogene pseudo chr7-8249 chr7 35630524 35630734 + 7.66 0.000 Intergenic Intergenic 64506 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding chr1-13583 chr1 8711344 8711554 + 7.66 0.000 intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 106191 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr2-5971 chr2 55120762 55120972 + 7.66 0.000 intron (NM_001321904, intron 1 of 9) intron (NM_001321904, intron 1 of 9) 16964 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr5-3040 chr5 17089879 17090089 + 7.66 0.000 Intergenic Intergenic 66008 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chrX-4390 chrX 51500262 51500472 + 7.66 0.000 intron (NR_110654, intron 4 of 4) intron (NR_110654, intron 4 of 4) -3775 NM_018159 55190 Hs.200016 NM_018159 ENSG00000196368 NUDT11 APS1|ASP1|DIPP3b|DIPP3beta|hDIPP3beta nudix hydrolase 11 protein-coding chr3-10060 chr3 107084593 107084803 + 7.66 0.000 Intergenic AluJb|SINE|Alu 155940 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr7-9026 chr7 101454853 101455063 + 7.66 0.000 intron (NM_133457, intron 3 of 12) Tigger17a|DNA|TcMar-Tigger 92083 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr16-3100 chr16 67828044 67828254 + 7.66 0.000 TTS (NM_025082) TTS (NM_025082) -14171 NM_020457 57215 Hs.632200 NM_020457 ENSG00000168286 THAP11 CTG-B43a|CTG-B45d|HRIHFB2206|RONIN THAP domain containing 11 protein-coding chr13-3814 chr13 46463718 46463928 + 7.66 0.000 intron (NR_120426, intron 3 of 5) SATR2|Satellite|Satellite 2953 NR_120426 101929344 Hs.491939 NR_120426 LINC01198 - long intergenic non-protein coding RNA 1198 ncRNA chr14-1427 chr14 71551487 71551697 + 7.66 0.000 intron (NM_001354289, intron 5 of 23) L2a|LINE|L2 -34706 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr10-3982 chr10 124592130 124592340 + 7.66 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) -111793 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr15-3334 chr15 80698675 80698885 + 7.66 0.000 intron (NM_021214, intron 1 of 2) intron (NM_021214, intron 1 of 2) 3470 NM_021214 58489 Hs.459072 NM_021214 ENSG00000136379 ABHD17C FAM108C1 abhydrolase domain containing 17C protein-coding chrX-1287 chrX 112997220 112997430 + 7.66 0.000 Intergenic Intergenic -45402 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr11-7811 chr11 105744095 105744305 + 7.66 0.000 intron (NR_046356, intron 2 of 16) L2c|LINE|L2 133494 NR_046356 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr10-1252 chr10 101703380 101703590 + 7.66 0.000 Intergenic AluSx1|SINE|Alu -8190 NM_001323541 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chrX-2837 chrX 137821535 137821745 + 7.66 0.000 Intergenic L1M4b|LINE|L1 255513 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr9-6211 chr9 102110165 102110375 + 7.66 0.000 Intergenic L1P4a|LINE|L1 -371690 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr8-6162 chr8 32158848 32159058 + 7.66 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) 132735 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr4-1945 chr4 111926251 111926461 + 7.66 0.000 Intergenic Intergenic -219098 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr1-13292 chr1 230283789 230283999 + 7.66 0.000 Intergenic Intergenic 142438 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr2-5817 chr2 232348920 232349130 + 7.66 0.000 Intergenic Intergenic -29726 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr3-10597 chr3 143508346 143508556 + 7.66 0.000 intron (NM_173653, intron 9 of 15) intron (NM_173653, intron 9 of 15) 166205 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr17-3129 chr17 35540919 35541129 + 7.66 0.000 Intergenic Intergenic -3163 NM_001363830 100506736 Hs.447559 NM_001145027 ENSG00000205045 SLFN12L - schlafen family member 12 like protein-coding chr11-6014 chr11 24524782 24524992 + 7.66 0.000 intron (NM_001252008, intron 1 of 11) intron (NM_001252008, intron 1 of 11) 27834 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr5-5698 chr5 164663758 164663968 + 7.66 0.000 Intergenic Intergenic 193584 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr4-2754 chr4 8611618 8611828 + 7.66 0.000 intron (NM_001014447, intron 7 of 10) intron (NM_001014447, intron 7 of 10) 18958 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr12-5992 chr12 96990408 96990618 + 7.66 0.000 Intergenic Intergenic 83047 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr4-7197 chr4 41614162 41614372 + 7.66 0.000 intron (NM_001330786, intron 4 of 22) intron (NM_001330786, intron 4 of 22) 1365 NM_001330983 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr2-13706 chr2 166180097 166180307 + 7.66 0.000 intron (NR_110260, intron 3 of 11) intron (NR_110260, intron 3 of 11) -31041 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr9-7923 chr9 89475128 89475338 + 7.66 0.000 intron (NM_001371194, intron 1 of 15) intron (NM_001371194, intron 1 of 15) 4657 NR_163888 chr3-4792 chr3 122924850 122925060 + 7.66 0.000 intron (NR_046079, intron 9 of 22) L2c|LINE|L2 38442 NR_024618 100129550 Hs.61558 NR_024618 ENSG00000273033 LINC02035 - long intergenic non-protein coding RNA 2035 ncRNA chr15-3313 chr15 79137908 79138118 + 7.66 0.000 Intergenic Intergenic -47233 NM_001145648 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr1-11958 chr1 72618785 72618995 + 7.66 0.000 Intergenic L1ME1|LINE|L1 -336351 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr11-5842 chr11 8913683 8913893 + 7.66 0.000 intron (NM_020642, intron 3 of 5) intron (NM_020642, intron 3 of 5) 2599 NM_001206647 56672 Hs.131180 NM_020642 ENSG00000166452 AKIP1 BCA3|C11orf17 A-kinase interacting protein 1 protein-coding chr6-1350 chr6 43053603 43053813 + 7.66 0.000 TTS (NM_001300848) TTS (NM_001300848) 237 NM_001168370 9820 Hs.520136 NM_014780 ENSG00000044090 CUL7 3M1|CUL-7|KIAA0076|dJ20C7.5 cullin 7 protein-coding chr1-12215 chr1 205688819 205689029 + 7.66 0.000 Intergenic AluJr|SINE|Alu -8415 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chr5-9062 chr5 170817077 170817287 + 7.66 0.000 Intergenic MER68|LTR|ERVL 33457 NM_014211 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr15-4877 chr15 75709603 75709813 + 7.66 0.000 intron (NM_001897, intron 1 of 9) intron (NM_001897, intron 1 of 9) 3140 NM_001897 1464 Hs.513044 NM_001897 ENSG00000173546 CSPG4 HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2 chondroitin sulfate proteoglycan 4 protein-coding chr21-1378 chr21 42384552 42384762 + 7.66 0.000 intron (NM_032404, intron 3 of 9) intron (NM_032404, intron 3 of 9) 4492 NM_032404 64699 Hs.208600 NM_024022 ENSG00000160183 TMPRSS3 DFNB10|DFNB8|ECHOS1|TADG12 transmembrane serine protease 3 protein-coding chr12-6638 chr12 494737 494947 + 7.66 0.000 intron (NM_173593, intron 1 of 19) intron (NM_173593, intron 1 of 19) 34903 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr4-7055 chr4 29574767 29574977 + 7.66 0.000 Intergenic MER76|LTR|ERVL 360580 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr11-5529 chr11 89246539 89246749 + 7.66 0.000 intron (NM_000372, intron 3 of 4) intron (NM_000372, intron 3 of 4) 68769 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr6-8499 chr6 157790889 157791099 + 7.66 0.000 Intergenic Intergenic -32252 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr1-12283 chr1 231359212 231359422 + 7.66 0.000 Intergenic L1M5|LINE|L1 21024 NM_032018 83932 Hs.554892 NM_032018 ENSG00000010072 SPRTN C1orf124|DVC1|PRO4323|spartan SprT-like N-terminal domain protein-coding chr2-5740 chr2 218354950 218355160 + 7.66 0.000 intron (NR_125777, intron 1 of 3) LTR13A|LTR|ERVK -1802 NM_001320865 375307 Hs.645453 NM_198559 ENSG00000158428 CATIP C2orf62 ciliogenesis associated TTC17 interacting protein protein-coding chr17-5483 chr17 41474937 41475147 + 7.66 0.000 Intergenic LTR101_Mam|LTR|ERVL 6098 NM_002280 3886 Hs.73082 NM_002280 ENSG00000197079 KRT35 HA5|Ha-5|K35|KRTHA5|hHa5 keratin 35 protein-coding chr6-5616 chr6 45422064 45422274 + 7.66 0.000 promoter-TSS (NM_001369405) promoter-TSS (NM_001369405) -106 NM_001369405 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr10-8703 chr10 101835929 101836139 + 7.66 0.000 intron (NM_173192, intron 1 of 8) intron (NM_173192, intron 1 of 8) 3837 NM_173194 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr7-8098 chr7 25779911 25780121 + 7.66 0.000 intron (NR_157808, intron 1 of 4) intron (NR_157808, intron 1 of 4) -3817 NR_157812 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr7-6278 chr7 137120233 137120443 + 7.66 0.000 intron (NR_046103, intron 1 of 3) MLT1I-int|LTR|ERVL-MaLR 44003 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA chr13-3128 chr13 78658137 78658347 + 7.66 0.000 intron (NM_024546, intron 1 of 5) intron (NM_024546, intron 1 of 5) 913 NM_024546 79596 Hs.567576 NM_024546 ENSG00000152193 OBI1 C13orf7|RNF219 ORC ubiquitin ligase 1 protein-coding chr13-2390 chr13 41915175 41915385 + 7.66 0.000 intron (NM_001009814, intron 2 of 25) intron (NM_001009814, intron 2 of 25) 45805 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chrX-3780 chrX 133504017 133504227 + 7.66 0.000 Intergenic Intergenic -88633 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr2-12713 chr2 79788316 79788526 + 7.66 0.000 intron (NM_001282598, intron 3 of 17) intron (NM_001282598, intron 3 of 17) 78162 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chrX-5371 chrX 150349165 150349375 + 7.66 0.000 Intergenic LTR16E2|LTR|ERVL -14047 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr6-4763 chr6 72810149 72810359 + 7.66 0.000 intron (NM_001160132, intron 1 of 13) intron (NM_001160132, intron 1 of 13) 157499 NR_036244 100423005 NR_036244 ENSG00000266180 MIR4282 - microRNA 4282 ncRNA chr10-2851 chr10 63465178 63465388 + 7.66 0.000 promoter-TSS (NR_027182) promoter-TSS (NR_027182) 54 NR_027182 84989 Hs.659950 NM_032903 ENSG00000272767 JMJD1C-AS1 - JMJD1C antisense RNA 1 ncRNA chr1-8214 chr1 24959114 24959324 + 7.66 0.000 intron (NM_001320672, intron 2 of 6) intron (NM_001320672, intron 2 of 6) 5791 NM_001320672 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr13-2399 chr13 42553661 42553871 + 7.66 0.000 Intergenic Intergenic -8970 NM_033012 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr5-4888 chr5 67002322 67002532 + 7.66 0.000 intron (NR_111908, intron 1 of 1) L2c|LINE|L2 1727 NR_111908 101928794 Hs.672435 NR_111908 MAST4-AS1 - MAST4 antisense RNA 1 ncRNA chr6-3654 chr6 138719412 138719622 + 7.66 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 27849 NR_033896 441172 Hs.92290 NR_033896 FLJ46906 - uncharacterized LOC441172 ncRNA chr11-4009 chr11 6523230 6523440 + 7.66 0.000 intron (NM_144666, intron 10 of 42) intron (NM_144666, intron 10 of 42) 26039 NM_144666 144132 Hs.720080 NM_144666 ENSG00000179532 DNHD1 C11orf47|CCDC35|DHCD1|DNHD1L dynein heavy chain domain 1 protein-coding chr9-6456 chr9 85992499 85992709 + 7.66 0.000 intron (NM_024635, intron 11 of 22) L1MC4|LINE|L1 51075 NM_001321882 60560 Hs.436098 NM_021929 ENSG00000135040 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding chr15-3640 chr15 80380191 80380401 + 7.66 0.000 Intergenic Intergenic -24086 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr5-2228 chr5 843936 844146 + 7.66 0.000 intron (NM_024786, intron 3 of 12) intron (NM_024786, intron 3 of 12) 6945 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr13-4027 chr13 72756742 72756952 + 7.66 0.000 TTS (NM_001286746) TTS (NM_001286746) 25053 NM_001322348 22894 Hs.744104 NM_014953 ENSG00000083520 DIS3 2810028N01Rik|EXOSC11|KIAA1008|RRP44|dis3p DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease protein-coding chr17-4602 chr17 4505731 4505941 + 7.66 0.000 intron (NM_001124758, intron 1 of 12) intron (NM_001124758, intron 1 of 12) 6955 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr3-4894 chr3 181586891 181587101 + 7.66 0.000 intron (NR_075091, intron 4 of 7) L1PA5|LINE|L1 -23338 NR_004053 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr20-2633 chr20 42640029 42640239 + 7.66 0.000 intron (NM_133170, intron 7 of 31) L2|LINE|L2 -45349 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr11-6080 chr11 33515981 33516191 + 7.66 0.000 intron (NM_012194, intron 1 of 20) MER117|DNA|hAT-Charlie 139978 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr11-6267 chr11 58392130 58392340 + 7.66 0.000 Intergenic Intergenic 11174 NM_001005469 441608 Hs.553826 NM_001005469 ENSG00000172769 OR5B3 OR11-239|OR5B13|OST129 olfactory receptor family 5 subfamily B member 3 protein-coding chr2-14837 chr2 241720456 241720666 + 7.66 0.000 3' UTR (NM_001330161, exon 8 of 8) 3' UTR (NM_001330161, exon 8 of 8) -14069 NM_001287249 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr11-10518 chr11 119520232 119520442 + 7.66 0.000 Intergenic Intergenic -95352 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr5-7788 chr5 64064754 64064964 + 7.66 0.000 Intergenic Intergenic -100984 NM_178532 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr9-8263 chr9 111982831 111983041 + 7.66 0.000 Intergenic Intergenic 50836 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr9-6760 chr9 21689402 21689612 + 7.66 0.000 Intergenic Intergenic -113129 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr22-4132 chr22 44554198 44554408 + 7.66 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -15037 NR_028411 388910 Hs.332685 NM_001012986 ENSG00000187012 LINC00207 NCRNA00207 long intergenic non-protein coding RNA 207 ncRNA chr9-5098 chr9 35054827 35055037 + 7.66 0.000 Intergenic AluSp|SINE|Alu 12692 NM_001040410 138724 Hs.148250 NM_203299 ENSG00000174038 C9orf131 - chromosome 9 open reading frame 131 protein-coding chrX-2703 chrX 120144528 120144738 + 7.66 0.000 intron (NR_131238, intron 4 of 4) intron (NR_131238, intron 4 of 4) -13977 NM_001099685 727940 Hs.196956 NM_001099685 ENSG00000203989 RHOXF2B - Rhox homeobox family member 2B protein-coding chrX-1548 chrX 45851535 45851745 + 7.66 0.000 promoter-TSS (NR_125365) promoter-TSS (NR_125365) -150 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr16-4808 chr16 86190472 86190682 + 7.66 0.000 Intergenic Intergenic -5604 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr3-6139 chr3 56012944 56013154 + 7.66 0.000 intron (NR_132749, intron 8 of 17) intron (NR_132749, intron 8 of 17) -160455 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr1-15052 chr1 94830880 94831090 + 7.66 0.000 intron (NM_001258340, intron 5 of 14) MIR|SINE|MIR 6492 NM_001350223 126969 Hs.483423 NM_152369 ENSG00000143036 SLC44A3 CTL3 solute carrier family 44 member 3 protein-coding chr12-5578 chr12 24348553 24348763 + 7.66 0.000 intron (NM_152989, intron 3 of 17) AluSx|SINE|Alu 125387 NR_120472 101928471 Hs.569156 NR_120472 ENSG00000256120 SOX5-AS1 - SOX5 antisense RNA 1 ncRNA chr10-6263 chr10 78502721 78502931 + 7.66 0.000 Intergenic Intergenic 235484 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr11-3571 chr11 55501500 55501710 + 7.66 0.000 Intergenic HERV15-int|LTR|ERV1 -52664 NM_001001920 81309 NM_001001920 ENSG00000181939 OR4C15 OR11-127|OR11-134 olfactory receptor family 4 subfamily C member 15 protein-coding chr21-1586 chr21 15564290 15564500 + 7.66 0.000 Intergenic L2c|LINE|L2 -165539 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr1-12366 chr1 3442082 3442292 + 7.66 0.000 Intergenic Intergenic -12478 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr15-5310 chr15 101849402 101849612 + 7.66 0.000 non-coding (NR_046417, exon 5 of 5) non-coding (NR_046417, exon 5 of 5) 7388 NR_046417 390651 Hs.578689 NR_046417 ENSG00000214344 OR4F13P GPCRLTM7 olfactory receptor family 4 subfamily F member 13 pseudogene pseudo chr1-12059 chr1 118012621 118012831 + 7.66 0.000 intron (NM_206996, intron 29 of 48) LTR65|LTR|ERV1 82987 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding chr1-9819 chr1 60265888 60266098 + 7.66 0.000 Intergenic Intergenic -192223 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr7-7617 chr7 132965309 132965519 + 7.66 0.000 intron (NM_001317177, intron 4 of 8) MIRc|SINE|MIR 69501 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr14-4137 chr14 74007621 74007831 + 7.66 0.000 5' UTR (NM_001321985, exon 4 of 17) 5' UTR (NM_001321985, exon 4 of 17) 11562 NM_001321988 957 Hs.655070 NM_001249 ENSG00000187097 ENTPD5 CD39L4|NTPDase-5|PCPH ectonucleoside triphosphate diphosphohydrolase 5 (inactive) protein-coding chr8-6415 chr8 57808131 57808341 + 7.66 0.000 Intergenic L1MA9|LINE|L1 62087 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr17-7583 chr17 20979363 20979573 + 7.66 0.000 intron (NR_160717, intron 4 of 4) HAL1|LINE|L1 40902 NR_160718 339260 Hs.661076 NR_123730 ENSG00000233098 LOC339260 - uncharacterized LOC339260 ncRNA chr10-6424 chr10 18317388 18317598 + 7.66 0.000 intron (NM_000724, intron 1 of 12) L1PA17|LINE|L1 -23216 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr15-3844 chr15 83693186 83693396 + 7.66 0.000 intron (NM_207517, intron 2 of 29) intron (NM_207517, intron 2 of 29) 39168 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr7-6258 chr7 134870911 134871121 + 7.66 0.000 intron (NM_033157, intron 3 of 14) intron (NM_033157, intron 3 of 14) -20384 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr13-1673 chr13 75829868 75830078 + 7.66 0.000 intron (NM_005358, intron 14 of 29) intron (NM_005358, intron 14 of 29) -41065 NM_001257995 729420 Hs.586820 NM_001257995 LMO7DN C13orf45 LMO7 downstream neighbor protein-coding chr13-3986 chr13 65261139 65261349 + 7.66 0.000 Intergenic Intergenic -604803 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr22-942 chr22 47004019 47004229 + 7.66 0.000 intron (NM_001284305, intron 10 of 12) intron (NM_001284305, intron 10 of 12) -88082 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr21-1154 chr21 41386514 41386724 + 7.66 0.000 intron (NM_002463, intron 5 of 13) intron (NM_002463, intron 5 of 13) 24592 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding chr2-14379 chr2 219421222 219421432 + 7.66 0.000 intron (NM_001927, intron 5 of 8) intron (NM_001927, intron 5 of 8) 2950 NM_001927 1674 Hs.594952 NM_001927 ENSG00000175084 DES CDCD3|CMD1F|CSM1|CSM2|LGMD1D|LGMD1E|LGMD2R desmin protein-coding chr3-6584 chr3 124701717 124701927 + 7.66 0.000 intron (NM_007064, intron 23 of 26) intron (NM_007064, intron 23 of 26) -28544 NR_033437 7372 Hs.2057 NM_000373 ENSG00000114491 UMPS OPRT uridine monophosphate synthetase protein-coding chr17-5070 chr17 3872288 3872498 + 7.66 0.000 intron (NM_172206, intron 12 of 15) intron (NM_172206, intron 12 of 15) 18350 NM_172206 84254 Hs.8417 NM_032294 ENSG00000004660 CAMKK1 CAMKKA calcium/calmodulin dependent protein kinase kinase 1 protein-coding chr5-4312 chr5 153164321 153164531 + 7.66 0.000 Intergenic MSTD|LTR|ERVL-MaLR -192077 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA GL000008.2-9 GL000008.2 136723 136933 + 7.66 0.000 NA NA NA NA chr19-5196 chr19 17241625 17241835 + 7.66 0.000 intron (NM_005234, intron 1 of 3) intron (NM_005234, intron 1 of 3) 3612 NM_005234 2063 Hs.466148 NM_005234 ENSG00000160113 NR2F6 EAR-2|EAR2|ERBAL2 nuclear receptor subfamily 2 group F member 6 protein-coding chr4-7939 chr4 109286394 109286604 + 7.66 0.000 intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 16159 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr1-10250 chr1 118147404 118147614 + 7.66 0.000 intron (NM_206996, intron 3 of 48) intron (NM_206996, intron 3 of 48) 37719 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr22-3339 chr22 22957928 22958138 + 7.66 0.000 Intergenic Intergenic 70217 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr7-6881 chr7 57487447 57487657 + 7.66 0.000 Intergenic Intergenic 37375 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chrX-807 chrX 69139675 69139885 + 7.66 0.000 Intergenic Intergenic 25673 NM_145119 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr10-2674 chr10 99123878 99124088 + 7.66 0.000 intron (NM_021828, intron 3 of 11) MER52A|LTR|ERV1 111892 NM_001166246 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding chr6-3964 chr6 104286528 104286738 + 7.66 0.000 Intergenic Intergenic 572913 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr4-2900 chr4 81952432 81952642 + 7.66 0.000 Intergenic Intergenic 421454 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr19-4331 chr19 1678842 1679052 + 7.66 0.000 Intergenic Intergenic -26332 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr7-2254 chr7 158864010 158864220 + 7.66 0.000 intron (NM_001350918, intron 1 of 26) intron (NM_001350918, intron 1 of 26) 7557 NM_001350918 55112 Hs.389945 NM_018051 ENSG00000126870 WDR60 FAP163|SRPS6|SRTD8 WD repeat domain 60 protein-coding chr4-5538 chr4 120572157 120572367 + 7.66 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 350604 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr19-7012 chr19 49621635 49621845 + 7.66 0.000 intron (NM_020719, intron 11 of 13) intron (NM_020719, intron 11 of 13) 18403 NM_006270 6237 Hs.515536 NM_006270 ENSG00000126458 RRAS R-Ras RAS related protein-coding chr5-4152 chr5 93995266 93995476 + 7.66 0.000 intron (NR_028080, intron 3 of 8) Tigger2b_Pri|DNA|TcMar-Tigger 116292 NM_032042 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr2-4414 chr2 105409778 105409988 + 7.66 0.000 intron (NM_201557, intron 1 of 5) intron (NM_201557, intron 1 of 5) -10216 NM_001318894 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr12-2072 chr12 132224606 132224816 + 7.66 0.000 intron (NM_001122636, intron 6 of 10) (CA)n|Simple_repeat|Simple_repeat -18683 NM_021808 50614 Hs.301062 NM_021808 ENSG00000182870 GALNT9 GALNAC-T9|GALNACT9 polypeptide N-acetylgalactosaminyltransferase 9 protein-coding chr7-3108 chr7 29878124 29878334 + 7.66 0.000 intron (NM_001080529, intron 3 of 8) intron (NM_001080529, intron 3 of 8) 71675 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family member 3 protein-coding chr15-4145 chr15 85975405 85975615 + 7.66 0.000 Intergenic Intergenic -104110 NM_152336 123624 Hs.31795 NM_152336 ENSG00000273540 AGBL1 CCP4|FECD8 ATP/GTP binding protein like 1 protein-coding chr12-4224 chr12 106195571 106195781 + 7.66 0.000 Intergenic Intergenic 52344 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr4-4772 chr4 99856226 99856436 + 7.66 0.000 intron (NM_001306151, intron 4 of 9) L2a|LINE|L2 38096 NM_021970 8649 Hs.433332 NM_021970 ENSG00000109270 LAMTOR3 MAP2K1IP1|MAPBP|MAPKSP1|MP1|PRO0633|Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding chr16-6635 chr16 68132575 68132785 + 7.66 0.000 intron (NM_004555, intron 3 of 10) L1MA5|LINE|L1 47310 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr17-8417 chr17 75925787 75925997 + 7.66 0.000 intron (NM_001319193, intron 11 of 28) MER112|DNA|hAT-Charlie 12340 NM_001319193 85302 Hs.720068 NM_001080542 ENSG00000188878 FBF1 Alb|FBF-1 Fas binding factor 1 protein-coding chr13-3462 chr13 111393338 111393548 + 7.66 0.000 Intergenic Intergenic 72801 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr2-2657 chr2 207632768 207632978 + 7.66 0.000 Intergenic Intergenic -6820 NM_001330134 151194 Hs.664764 NM_145280 ENSG00000144401 METTL21A FAM119A|HCA557b|HSPA-KMT methyltransferase like 21A protein-coding chr20-1764 chr20 50684393 50684603 + 7.66 0.000 intron (NM_001290268, intron 1 of 21) L2a|LINE|L2 7044 NM_001290268 140876 Hs.372578 NM_080829 ENSG00000042062 RIPOR3 C20orf175|C20orf176|FAM65C RIPOR family member 3 protein-coding chr13-3242 chr13 30744498 30744708 + 7.66 0.000 intron (NM_001204406, intron 3 of 5) intron (NM_001204406, intron 3 of 5) 9095 NM_001629 241 Hs.507658 NM_001629 ENSG00000132965 ALOX5AP FLAP arachidonate 5-lipoxygenase activating protein protein-coding chr2-9729 chr2 65465304 65465514 + 7.66 0.000 Intergenic Intergenic -32810 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr1-11985 chr1 88337278 88337488 + 7.66 0.000 Intergenic Intergenic -346761 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr11-8706 chr11 6257400 6257610 + 7.66 0.000 Intergenic LTR16A|LTR|ERVL -2333 NM_176875 887 Hs.203 NM_176875 ENSG00000110148 CCKBR CCK-B|CCK2R|GASR cholecystokinin B receptor protein-coding chr1-10512 chr1 167044158 167044368 + 7.66 0.000 Intergenic Intergenic 46114 NM_005814 10223 Hs.651244 NM_005814 ENSG00000143167 GPA33 A33 glycoprotein A33 protein-coding chr9-4765 chr9 133009298 133009508 + 7.66 0.000 Intergenic L1ME4b|LINE|L1 -11027 NR_132980 106635683 NR_132980 SNORD141A - small nucleolar RNA, C/D box 141A snoRNA chr4-7359 chr4 57974293 57974503 + 7.66 0.000 Intergenic Intergenic 548526 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr17-5281 chr17 20787656 20787866 + 7.66 0.000 Intergenic Intergenic 75315 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr1-7692 chr1 22276662 22276872 + 7.66 0.000 Intergenic Intergenic 10528 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr16-5530 chr16 25225225 25225435 + 7.66 0.000 intron (NM_001169, intron 4 of 5) intron (NM_001169, intron 4 of 5) 8383 NM_001169 343 Hs.176658 NM_001169 ENSG00000103375 AQP8 AQP-8 aquaporin 8 protein-coding chr6-4809 chr6 79906046 79906256 + 7.66 0.000 Intergenic AluSp|SINE|Alu 41402 NM_022726 6785 Hs.101915 NM_022726 ENSG00000118402 ELOVL4 ADMD|CT118|ISQMR|SCA34|STGD2|STGD3 ELOVL fatty acid elongase 4 protein-coding chr6-5924 chr6 64350446 64350656 + 7.66 0.000 intron (NM_001292009, intron 29 of 43) intron (NM_001292009, intron 29 of 43) 543715 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr18-2479 chr18 47737036 47737246 + 7.66 0.000 Intergenic AluJr|SINE|Alu 193518 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr8-1939 chr8 48318754 48318964 + 7.66 0.000 Intergenic Intergenic -232708 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr4-5260 chr4 172308012 172308222 + 7.66 0.000 intron (NM_001034845, intron 3 of 12) L1PB1|LINE|L1 380800 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr16-5008 chr16 29003052 29003262 + 7.66 0.000 Intergenic HERVL-int|LTR|ERVL 18105 NM_001014987 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr19-5806 chr19 36151985 36152195 + 7.66 0.000 intron (NM_001864, intron 1 of 3) CpG-14329 357 NM_001864 1346 Hs.421621 NM_001864 ENSG00000161281 COX7A1 COX7A|COX7AH|COX7AM cytochrome c oxidase subunit 7A1 protein-coding chr5-7682 chr5 55357415 55357625 + 7.66 0.000 intron (NM_015360, intron 14 of 26) intron (NM_015360, intron 14 of 26) 49531 NM_015360 23517 Hs.274531 NM_015360 ENSG00000039123 MTREX Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118 Mtr4 exosome RNA helicase protein-coding chr13-4000 chr13 68772337 68772547 + 7.66 0.000 Intergenic Intergenic 112883 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr18-3467 chr18 69611345 69611555 + 7.66 0.000 intron (NM_152721, intron 3 of 7) L1MD2|LINE|L1 141519 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr20-4192 chr20 46019303 46019513 + 7.66 0.000 intron (NR_147699, intron 2 of 2) MER20|DNA|hAT-Charlie -2278 NM_001134771 57468 Hs.21413 NM_020708 ENSG00000124140 SLC12A5 EIEE34|EIG14|KCC2|hKCC2 solute carrier family 12 member 5 protein-coding chr22-3285 chr22 47201752 47201962 + 7.66 0.000 Intergenic MER52D|LTR|ERV1 -143714 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr15-2180 chr15 83709272 83709482 + 7.66 0.000 intron (NM_207517, intron 3 of 29) intron (NM_207517, intron 3 of 29) 55254 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr4-3360 chr4 7135932 7136142 + 7.66 0.000 Intergenic MIRb|SINE|MIR -32661 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr1-16379 chr1 221983706 221983916 + 7.66 0.000 intron (NR_149071, intron 2 of 2) L2b|LINE|L2 -5291 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr5-7158 chr5 3285675 3285885 + 7.66 0.000 Intergenic Intergenic 107945 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr10-3583 chr10 86242179 86242389 + 7.66 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 22504 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr5-4592 chr5 29296819 29297029 + 7.66 0.000 Intergenic LTR12C|LTR|ERV1 99052 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA chr15-4249 chr15 33644265 33644475 + 7.66 0.000 exon (NM_001036, exon 28 of 104) exon (NM_001036, exon 28 of 104) -324127 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr7-9053 chr7 103481117 103481327 + 7.66 0.000 intron (NM_005045, intron 63 of 64) intron (NM_005045, intron 63 of 64) -35015 NM_198999 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chrX-2721 chrX 123557619 123557829 + 7.66 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 175328 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr5-2263 chr5 31383798 31384008 + 7.66 0.000 Intergenic Intergenic 148190 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr11-8829 chr11 12244651 12244861 + 7.66 0.000 intron (NR_144417, intron 21 of 26) L2b|LINE|L2 -42144 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr4-3301 chr4 153725050 153725260 + 7.66 0.000 intron (NM_173662, intron 4 of 8) intron (NM_173662, intron 4 of 8) 34869 NM_173662 285533 Hs.388364 NM_173662 ENSG00000145428 RNF175 - ring finger protein 175 protein-coding chr6-3831 chr6 37740419 37740629 + 7.66 0.000 Intergenic MER70A|LTR|ERVL -42641 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr17-6863 chr17 27632996 27633206 + 7.66 0.000 intron (NR_024043, intron 1 of 9) intron (NR_024043, intron 1 of 9) 1913 NM_002308 3965 Hs.81337 NM_002308 ENSG00000168961 LGALS9 HUAT|LGALS9A galectin 9 protein-coding chr15-2376 chr15 47976311 47976521 + 7.66 0.000 Intergenic Intergenic -130180 NR_120336 101928442 Hs.242804 NR_120336 ENSG00000259572 LINC01491 - long intergenic non-protein coding RNA 1491 ncRNA chr11-4020 chr11 8773179 8773389 + 7.66 0.000 intron (NR_120590, intron 1 of 4) intron (NR_120590, intron 1 of 4) 4506 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chrX-4022 chrX 17185651 17185861 + 7.66 0.000 Intergenic Intergenic -189444 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr8-6018 chr8 23239190 23239400 + 7.66 0.000 Intergenic MLT2A1|LTR|ERVL -4342 NM_152272 91782 Hs.5019 NM_152272 ENSG00000147457 CHMP7 - charged multivesicular body protein 7 protein-coding chr15-3515 chr15 99537406 99537616 + 7.66 0.000 Intergenic MIR3|SINE|MIR -27906 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr14-2960 chr14 49961515 49961725 + 7.66 0.000 Intergenic Intergenic -4779 NR_106724 102464828 NR_106724 ENSG00000278038 MIR6076 hsa-mir-6076 microRNA 6076 ncRNA chr10-2391 chr10 114174761 114174971 + 7.66 0.000 promoter-TSS (NM_153249) promoter-TSS (NM_153249) -646 NR_135815 55088 Hs.159066 NM_018017 ENSG00000165813 CCDC186 C10orf118|CCCP-1|golgin104 coiled-coil domain containing 186 protein-coding chr11-8505 chr11 122106490 122106700 + 7.66 0.000 promoter-TSS (NR_137196) promoter-TSS (NR_137196) -979 NR_137195 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr2-12155 chr2 38485823 38486033 + 7.66 0.000 intron (NR_110259, intron 2 of 4) L1MB4|LINE|L1 29812 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chr1-8208 chr1 24589038 24589248 + 7.66 0.000 intron (NM_001010980, intron 1 of 3) MIRb|SINE|MIR 33056 NM_001010980 400746 Hs.200253 NM_001010980 ENSG00000184454 NCMAP C1orf130|MP11 non-compact myelin associated protein protein-coding chr9-7529 chr9 34105592 34105802 + 7.66 0.000 intron (NM_015397, intron 4 of 8) L1ME4a|LINE|L1 21001 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr8-5826 chr8 4780129 4780339 + 7.66 0.000 intron (NM_033225, intron 1 of 69) intron (NM_033225, intron 1 of 69) 214680 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr14-4708 chr14 58747302 58747512 + 7.66 0.000 Intergenic Intergenic -80881 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr9-8510 chr9 125223993 125224203 + 7.66 0.000 intron (NM_001174153, intron 5 of 7) AluSx1|SINE|Alu 17245 NM_005347 3309 Hs.743241 NM_005347 ENSG00000044574 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock protein family A (Hsp70) member 5 protein-coding chr1-3540 chr1 215251022 215251232 + 7.66 0.000 Intergenic Intergenic 168390 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr2-10943 chr2 80445398 80445608 + 7.66 0.000 intron (NM_001282599, intron 3 of 11) intron (NM_001282599, intron 3 of 11) 132124 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr6-8094 chr6 125656291 125656501 + 7.66 0.000 Intergenic Intergenic -17957 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr5-3800 chr5 80916572 80916782 + 7.66 0.000 Intergenic Intergenic -43686 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding chr3-5751 chr3 20927373 20927583 + 7.66 0.000 Intergenic Intergenic -478248 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr10-6856 chr10 27252383 27252593 + 7.66 0.000 promoter-TSS (NR_003525) promoter-TSS (NR_003525) -182 NR_003525 387646 Hs.631829 NM_001006604 ENSG00000230445 LRRC37A6P LRRC37E leucine rich repeat containing 37 member A6, pseudogene pseudo chr1-7952 chr1 181598541 181598751 + 7.66 0.000 intron (NM_001205293, intron 6 of 47) intron (NM_001205293, intron 6 of 47) 115129 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr1-6137 chr1 165522577 165522787 + 7.66 0.000 intron (NR_026744, intron 4 of 6) L2|LINE|L2 -21559 NM_001005214 440699 Hs.664975 NM_001005214 ENSG00000162763 LRRC52 - leucine rich repeat containing 52 protein-coding chr17-7497 chr17 16728653 16728863 + 7.66 0.000 intron (NR_130142, intron 9 of 15) L1PB3|LINE|L1 38517 NR_130142 9720 Hs.745246 NM_014695 ENSG00000170160 CCDC144A - coiled-coil domain containing 144A protein-coding chr7-4710 chr7 47583603 47583813 + 7.66 0.000 Intergenic MIR|SINE|MIR -1597 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding KI270708.1-1 KI270708.1 76974 77184 + 7.66 0.000 NA NA NA NA chr1-16591 chr1 236489891 236490101 + 7.66 0.000 Intergenic Intergenic -28218 NM_201545 3964 Hs.4082 NM_006499 ENSG00000116977 LGALS8 Gal-8|PCTA-1|PCTA1|Po66-CBP galectin 8 protein-coding chr4-2953 chr4 105993928 105994138 + 7.66 0.000 Intergenic Intergenic 28445 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chr17-5958 chr17 76546593 76546803 + 7.66 0.000 Intergenic Intergenic 6654 NM_001077620 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 photoreceptor disc component protein-coding chr11-5992 chr11 20364059 20364269 + 7.66 0.000 promoter-TSS (NM_001098523) promoter-TSS (NM_001098523) 23 NM_001098523 10553 Hs.90753 NM_006410 ENSG00000109854 HTATIP2 CC3|SDR44U1|TIP30 HIV-1 Tat interactive protein 2 protein-coding chr1-7863 chr1 98253283 98253493 + 7.66 0.000 intron (NR_046088, intron 2 of 2) MamGypLTR2c|LTR|Gypsy 42677 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr4-4211 chr4 15457563 15457773 + 7.66 0.000 Intergenic Intergenic -12197 NM_020785 57545 Hs.590928 NM_020785 ENSG00000048342 CC2D2A JBTS9|MKS6 coiled-coil and C2 domain containing 2A protein-coding chr1-6750 chr1 67888854 67889064 + 7.66 0.000 intron (NR_040077, intron 1 of 9) intron (NR_040077, intron 1 of 9) -55492 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr12-1646 chr12 6915509 6915719 + 7.66 0.000 intron (NM_001975, intron 1 of 11) intron (NM_001975, intron 1 of 11) 1034 NM_001975 2026 Hs.511915 NM_001975 ENSG00000111674 ENO2 HEL-S-279|NSE enolase 2 protein-coding chr16-6613 chr16 67552620 67552830 + 7.66 0.000 Intergenic L2|LINE|L2 9584 NR_158165 107984813 Hs.385760 NR_158165 LOC107984813 - uncharacterized LOC107984813 ncRNA chr15-1956 chr15 34346246 34346456 + 7.66 0.000 intron (NM_175741, intron 2 of 7) intron (NM_175741, intron 2 of 7) 3036 NM_001284293 256646 Hs.525769 NM_175741 ENSG00000184507 NUTM1 C15orf55|FAM22H|NUT NUT midline carcinoma family member 1 protein-coding chr7-8772 chr7 79590862 79591072 + 7.66 0.000 Intergenic LTR85c|LTR|Gypsy? 137007 NR_038343 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr2-9743 chr2 74985252 74985462 + 7.66 0.000 Intergenic L2c|LINE|L2 26714 NM_019896 56655 Hs.469060 NM_019896 ENSG00000115350 POLE4 YHHQ1|p12 DNA polymerase epsilon 4, accessory subunit protein-coding chr2-13793 chr2 173250585 173250795 + 7.66 0.000 intron (NM_016653, intron 16 of 19) intron (NM_016653, intron 16 of 19) 31346 NR_033882 339751 Hs.570083 NR_033882 ENSG00000238133 MAP3K20-AS1 MLK7-AS1 MAP3K20 antisense RNA 1 ncRNA chr1-14685 chr1 62182437 62182647 + 7.66 0.000 Intergenic HERVK14-int|LTR|ERVK -12307 NM_001164835 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr2-11488 chr2 234509877 234510087 + 7.66 0.000 Intergenic L2|LINE|L2 -12901 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr2-7243 chr2 226915847 226916057 + 7.66 0.000 intron (NM_001349069, intron 8 of 8) MLT1H|LTR|ERVL-MaLR 79898 NM_032276 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding chr21-1652 chr21 25564081 25564291 + 7.66 0.000 intron (NR_001458, intron 1 of 2) intron (NR_001458, intron 1 of 2) 2041 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene ncRNA chr21-1895 chr21 44085444 44085654 + 7.66 0.000 intron (NM_001351709, intron 8 of 15) AluJr|SINE|Alu 11225 NM_001351709 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr22-1406 chr22 39985032 39985242 + 7.66 0.000 Intergenic Intergenic -9817 NM_138435 113828 Hs.26192 NM_138435 ENSG00000133477 FAM83F - family with sequence similarity 83 member F protein-coding chr6-6257 chr6 34310026 34310236 + 7.66 0.000 intron (NM_001202470, intron 6 of 8) AluJr|SINE|Alu -61023 NR_155741 221491 Hs.381300 NM_178508 ENSG00000186577 SMIM29 C6orf1|LBH small integral membrane protein 29 protein-coding chr2-4633 chr2 169789950 169790160 + 7.66 0.000 Intergenic Intergenic -8816 NM_003142 6741 Hs.632535 NM_003142 ENSG00000138385 SSB LARP3|La|La/SSB small RNA binding exonuclease protection factor La protein-coding chr2-10237 chr2 112141784 112141994 + 7.66 0.000 intron (NM_001128165, intron 1 of 6) intron (NM_001128165, intron 1 of 6) 3504 NM_153214 129804 Hs.437696 NM_153214 ENSG00000144152 FBLN7 TM14 fibulin 7 protein-coding chr12-6879 chr12 20486791 20487001 + 7.66 0.000 intron (NM_000921, intron 1 of 15) AluSz6|SINE|Alu -84968 NM_001244683 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr5-7828 chr5 67538479 67538689 + 7.66 0.000 Intergenic Intergenic 108205 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr15-4623 chr15 62124210 62124420 + 7.66 0.000 Intergenic MIR|SINE|MIR 40970 NM_001007595 388125 Hs.144372 NM_001007595 ENSG00000205502 C2CD4B FAM148B|NLF2 C2 calcium dependent domain containing 4B protein-coding chr7-7625 chr7 134875962 134876172 + 7.66 0.000 intron (NM_033157, intron 3 of 14) intron (NM_033157, intron 3 of 14) -15333 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr20-2624 chr20 41705179 41705389 + 7.66 0.000 Intergenic Charlie10b|DNA|hAT-Charlie -86907 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr17-2011 chr17 1482757 1482967 + 7.66 0.000 exon (NM_001363855, exon 4 of 32) exon (NM_001363855, exon 4 of 32) 2539 NM_001363855 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr6-3582 chr6 72273206 72273416 + 7.66 0.000 intron (NM_001350414, intron 15 of 24) intron (NM_001350414, intron 15 of 24) 56370 NM_001350474 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr12-8131 chr12 120393538 120393748 + 7.66 0.000 Intergenic MIRb|SINE|MIR -24479 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chr2-7050 chr2 160397230 160397440 + 7.66 0.000 intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) 10547 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chrX-4610 chrX 74382718 74382928 + 7.66 0.000 Intergenic Intergenic -38670 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr14-4786 chr14 65083924 65084134 + 7.66 0.000 non-coding (NR_073138, exon 3 of 3) non-coding (NR_073138, exon 3 of 3) -5889 NR_045122 100506321 Hs.711267 NR_045122 ENSG00000259118 LOC100506321 - uncharacterized LOC100506321 ncRNA chr10-7683 chr10 28914713 28914923 + 7.66 0.000 Intergenic Intergenic 68410 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr7-4754 chr7 73313124 73313334 + 7.66 0.000 exon (NM_001281451, exon 7 of 7) exon (NM_001281451, exon 7 of 7) -4362 NM_001168348 55695 Hs.510927 NM_018044 ENSG00000130305 NSUN5 NOL1|NOL1R|NSUN5A|WBSCR20|WBSCR20A|p120|p120(NOL1) NOP2/Sun RNA methyltransferase 5 protein-coding chr1-7157 chr1 206100380 206100590 + 7.66 0.000 intron (NM_001369490, intron 4 of 5) intron (NM_001369490, intron 4 of 5) 16890 NM_001369490 440712 Hs.662248 NM_001007544 ENSG00000263961 RHEX C1orf186 regulator of hemoglobinization and erythroid cell expansion protein-coding chr11-10757 chr11 134101360 134101570 + 7.66 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 32393 NM_032801 83700 Hs.150718 NM_032801 ENSG00000166086 JAM3 JAM-2|JAM-3|JAM-C|JAMC junctional adhesion molecule 3 protein-coding chr11-5207 chr11 13080883 13081093 + 7.66 0.000 Intergenic Intergenic 71672 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr3-10381 chr3 128902291 128902501 + 7.66 0.000 intron (NM_014049, intron 8 of 17) intron (NM_014049, intron 8 of 17) 22776 NM_014049 28976 Hs.567482 NM_014049 ENSG00000177646 ACAD9 MC1DN20|NPD002 acyl-CoA dehydrogenase family member 9 protein-coding chr4-4745 chr4 95049947 95050157 + 7.66 0.000 intron (NM_001256792, intron 1 of 10) intron (NM_001256792, intron 1 of 10) -1625 NM_001256793 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr7-8999 chr7 100621470 100621680 + 7.66 0.000 intron (NM_003227, intron 17 of 17) intron (NM_003227, intron 17 of 17) 9035 NM_023948 64598 Hs.521086 NM_023948 ENSG00000106330 MOSPD3 CDS3|NET30 motile sperm domain containing 3 protein-coding chr7-3324 chr7 67371839 67372049 + 7.66 0.000 Intergenic Intergenic 35968 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr6-8029 chr6 119231186 119231396 + 7.66 0.000 intron (NM_005907, intron 6 of 12) THE1D|LTR|ERVL-MaLR -82098 NM_001288576 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr12-5703 chr12 111593103 111593313 + 7.66 0.000 intron (NM_001310121, intron 1 of 25) AluSx1|SINE|Alu 6107 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr15-2412 chr15 66801915 66802125 + 7.66 0.000 Intergenic MIRb|SINE|MIR 99784 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr1-12272 chr1 227156911 227157121 + 7.66 0.000 intron (NM_001366019, intron 6 of 36) intron (NM_001366019, intron 6 of 36) 161476 NM_001366010 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr6-4360 chr6 20149072 20149282 + 7.66 0.000 intron (NR_073465, intron 1 of 9) intron (NR_073465, intron 1 of 9) 63292 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr8-5476 chr8 47526493 47526703 + 7.66 0.000 intron (NM_001352958, intron 10 of 21) intron (NM_001352958, intron 10 of 21) -127490 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr12-3346 chr12 91109653 91109863 + 7.66 0.000 intron (NM_002345, intron 1 of 2) intron (NM_002345, intron 1 of 2) 1736 NM_002345 4060 Hs.406475 NM_002345 ENSG00000139329 LUM LDC|SLRR2D lumican protein-coding chr9-5790 chr9 128412413 128412623 + 7.66 0.000 intron (NR_031672, intron 2 of 2).4 intron (NR_031672, intron 2 of 2).4 -6642 NM_001286760 51148 Hs.495230 NM_016174 ENSG00000167123 CERCAM CEECAM1|GLT25D3 cerebral endothelial cell adhesion molecule protein-coding chrX-3817 chrX 144895616 144895826 + 7.66 0.000 Intergenic MER34A|LTR|ERV1 -351782 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr16-3903 chr16 78723998 78724208 + 7.66 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 624449 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr9-5511 chr9 105608996 105609206 + 7.66 0.000 intron (NR_147213, intron 7 of 9) L2c|LINE|L2 50970 NM_001351502 2218 Hs.55777 NM_006731 ENSG00000106692 FKTN CMD1X|FCMD|LGMD2M|LGMDR13|MDDGA4|MDDGB4|MDDGC4 fukutin protein-coding chr3-4788 chr3 120842555 120842765 + 7.66 0.000 Intergenic UCON93|Unknown|Unknown -6303 NR_135571 101926983 Hs.553055 NR_135570 ENSG00000243593 LINC02049 - long intergenic non-protein coding RNA 2049 ncRNA chr9-3018 chr9 123349864 123350074 + 7.66 0.000 Intergenic Intergenic -6228 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr13-3719 chr13 39385231 39385441 + 7.66 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 217857 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr13-4454 chr13 112670101 112670311 + 7.66 0.000 intron (NM_207440, intron 1 of 2) intron (NM_207440, intron 1 of 2) -20123 NM_015205 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr11-9428 chr11 60278863 60279073 + 7.66 0.000 Intergenic L2c|LINE|L2 -1698 NM_024021 51338 Hs.325960 NM_024021 ENSG00000110079 MS4A4A 4SPAN1|CD20-L1|CD20L1|HDCME31P|MS4A4|MS4A7 membrane spanning 4-domains A4A protein-coding chr19-4581 chr19 11422397 11422607 + 7.66 0.000 exon (NM_001302454, exon 8 of 11) exon (NM_001302454, exon 8 of 11) -3188 NM_001035223 57139 Hs.375142 NM_001035223 ENSG00000205517 RGL3 - ral guanine nucleotide dissociation stimulator like 3 protein-coding chr22-3870 chr22 34045241 34045451 + 7.66 0.000 Intergenic Intergenic -122458 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr12-5866 chr12 50017780 50017990 + 7.66 0.000 intron (NM_001320004, intron 1 of 16) AluSz6|SINE|Alu 7609 NM_001319999 29127 Hs.505469 NM_013277 ENSG00000161800 RACGAP1 CYK4|HsCYK-4|ID-GAP|MgcRacGAP Rac GTPase activating protein 1 protein-coding chr9-3608 chr9 86732672 86732882 + 7.66 0.000 Intergenic Intergenic 214729 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr11-8297 chr11 73226197 73226407 + 7.66 0.000 intron (NM_176071, intron 1 of 2) intron (NM_176071, intron 1 of 2) 7740 NM_176071 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr7-5276 chr7 22394069 22394279 + 7.66 0.000 Intergenic Intergenic -37020 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr1-15738 chr1 171576267 171576477 + 7.66 0.000 intron (NM_015172, intron 25 of 33) intron (NM_015172, intron 25 of 33) -43391 NM_001368164 110806290 NM_001368164 MYOCOS - myocilin opposite strand protein-coding chr2-7736 chr2 37020648 37020858 + 7.66 0.000 exon (NM_019024, exon 25 of 36) exon (NM_019024, exon 25 of 36) -54217 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr4-2832 chr4 44269829 44270039 + 7.66 0.000 intron (NM_198353, intron 1 of 1) L1PA3|LINE|L1 178875 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr15-2510 chr15 38505988 38506198 + 7.66 0.000 intron (NM_001306086, intron 9 of 14) intron (NM_001306086, intron 9 of 14) 51966 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr22-3436 chr22 39784349 39784559 + 7.66 0.000 intron (NM_152512, intron 5 of 6) L1MA4|LINE|L1 109306 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr4-8033 chr4 119034486 119034696 + 7.66 0.000 3' UTR (NM_001128933, exon 4 of 4) 3' UTR (NM_001128933, exon 4 of 4) -101193 NM_016599 51778 Hs.732122 NM_016599 ENSG00000172399 MYOZ2 C4orf5|CMH16|CS-1|FATZ-2 myozenin 2 protein-coding chr14-4562 chr14 45898110 45898320 + 7.66 0.000 Intergenic Intergenic -165944 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA chr3-9447 chr3 49218548 49218758 + 7.66 0.000 intron (NM_001135197, intron 2 of 7) AluSg|SINE|Alu 19155 NM_001135197 339834 Hs.631931 NM_178173 ENSG00000173421 CCDC36 CT74 coiled-coil domain containing 36 protein-coding chr4-7884 chr4 105155579 105155789 + 7.66 0.000 intron (NM_001127208, intron 1 of 10) intron (NM_001127208, intron 1 of 10) 8999 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr5-2596 chr5 105640306 105640516 + 7.66 0.000 Intergenic MER52A|LTR|ERV1 540937 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr12-5544 chr12 132704066 132704276 + 7.66 0.000 intron (NM_018663, intron 4 of 4) L2b|LINE|L2 -6671 NM_001170544 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr7-6684 chr7 157104527 157104737 + 7.66 0.000 Intergenic AluSx1|SINE|Alu -34294 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr8-3305 chr8 27024755 27024965 + 7.66 0.000 Intergenic Intergenic 24103 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA chr4-4736 chr4 94129855 94130065 + 7.66 0.000 intron (NR_125922, intron 6 of 8) AluSz|SINE|Alu 77596 NR_125922 101929210 Hs.518877 NR_125922 ENSG00000246541 LOC101929210 - uncharacterized LOC101929210 ncRNA chr15-4616 chr15 61583314 61583524 + 7.66 0.000 Intergenic L1PA15|LINE|L1 -146499 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr20-2364 chr20 16459388 16459598 + 7.66 0.000 intron (NM_001199866, intron 12 of 22) intron (NM_001199866, intron 12 of 22) 113955 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr11-7622 chr11 48107399 48107609 + 7.66 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) 10722 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr3-8792 chr3 5383373 5383583 + 7.66 0.000 Intergenic L1PA7|LINE|L1 -133223 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr16-4111 chr16 2787987 2788197 + 7.66 0.000 Intergenic Intergenic -1385 NM_152891 260429 Hs.280658 NM_152891 ENSG00000103355 PRSS33 EOS serine protease 33 protein-coding chr2-10824 chr2 53955841 53956051 + 7.66 0.000 intron (NM_014614, intron 1 of 46) AluJo|SINE|Alu 15047 NM_014614 23198 Hs.413801 NM_014614 ENSG00000068878 PSME4 PA200 proteasome activator subunit 4 protein-coding chr7-7783 chr7 1972643 1972853 + 7.66 0.000 intron (NM_001013837, intron 15 of 18) L1MD|LINE|L1 -32177 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr18-2418 chr18 13193901 13194111 + 7.66 0.000 Intergenic L1ME3C|LINE|L1 -24754 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr7-8326 chr7 42107977 42108187 + 7.66 0.000 intron (NM_000168, intron 3 of 14) intron (NM_000168, intron 3 of 14) 129127 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr10-6172 chr10 12835802 12836012 + 7.66 0.000 TTS (NM_153498) TTS (NM_153498) -110554 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr5-7860 chr5 72653764 72653974 + 7.66 0.000 intron (NR_105007, intron 1 of 2) intron (NR_105007, intron 1 of 2) 6800 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr20-1920 chr20 5647289 5647499 + 7.66 0.000 Intergenic Intergenic -36388 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr1-7358 chr1 17714399 17714609 + 7.66 0.000 Intergenic Intergenic -40829 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr10-9248 chr10 133365098 133365308 + 7.66 0.000 intron (NM_004092, intron 6 of 7) intron (NM_004092, intron 6 of 7) 6460 NR_037509 100500911 NR_037509 ENSG00000265395 MIR3944 - microRNA 3944 ncRNA chr13-883 chr13 35471185 35471395 + 7.66 0.000 intron (NM_015678, intron 40 of 57) CpG 5399 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr11-10417 chr11 115408729 115408939 + 7.66 0.000 intron (NM_001098517, intron 1 of 8) intron (NM_001098517, intron 1 of 8) 12078 NR_135102 105369507 Hs.664155 NR_135102 ENSG00000256315 LOC105369507 - uncharacterized LOC105369507 ncRNA chr21-635 chr21 45997854 45998064 + 7.66 0.000 intron (NM_001848, intron 22 of 34) intron (NM_001848, intron 22 of 34) 16210 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr4-6116 chr4 18723071 18723281 + 7.66 0.000 Intergenic Intergenic -701301 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr9-6009 chr9 135280286 135280496 + 7.66 0.000 Intergenic Intergenic -62858 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr8-5202 chr8 110485653 110485863 + 7.66 0.000 Intergenic L1MA1|LINE|L1 -509987 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr14-3491 chr14 102690490 102690700 + 7.66 0.000 intron (NM_015156, intron 3 of 11) AluJb|SINE|Alu -86854 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr1-16667 chr1 242092554 242092764 + 7.66 0.000 intron (NM_001320272, intron 10 of 10) intron (NM_001320272, intron 10 of 10) -93561 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr3-2954 chr3 62049113 62049323 + 7.66 0.000 intron (NM_002841, intron 4 of 29) intron (NM_002841, intron 4 of 29) 269729 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr2-8167 chr2 85687183 85687393 + 7.66 0.000 Intergenic Intergenic -7070 NM_012483 10578 Hs.105806 NM_006433 ENSG00000115523 GNLY D2S69E|LAG-2|LAG2|NKG5|TLA519 granulysin protein-coding chr4-2926 chr4 93031849 93032059 + 7.66 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 727555 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr20-3208 chr20 52292163 52292373 + 7.66 0.000 Intergenic Intergenic -100283 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr14-3981 chr14 33293953 33294163 + 7.66 0.000 intron (NM_173159, intron 3 of 11) intron (NM_173159, intron 3 of 11) 355179 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr20-3770 chr20 20399895 20400105 + 7.66 0.000 intron (NM_020343, intron 38 of 39) intron (NM_020343, intron 38 of 39) 31896 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr13-3691 chr13 36638930 36639140 + 7.66 0.000 Intergenic Intergenic -34985 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr7-4628 chr7 28180331 28180541 + 7.66 0.000 promoter-TSS (NR_034097) promoter-TSS (NR_034097) -21 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr19-4983 chr19 46388210 46388420 + 7.66 0.000 intron (NM_001204284, intron 8 of 11) intron (NM_001204284, intron 8 of 11) 25249 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr7-7576 chr7 123015717 123015927 + 7.66 0.000 Intergenic L1PA6|LINE|L1 -20122 NM_016945 50833 Hs.272395 NM_016945 ENSG00000128519 TAS2R16 BGLPT|T2R16 taste 2 receptor member 16 protein-coding chr19-3742 chr19 47697240 47697450 + 7.66 0.000 intron (NM_015711, intron 11 of 14) AluSx3|SINE|Alu -16077 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr2-12553 chr2 68418108 68418318 + 7.66 0.000 Intergenic Intergenic 49081 NM_001024680 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding chr3-7461 chr3 133536351 133536561 + 7.66 0.000 Intergenic UCON35|Unknown|Unknown -37230 NM_001134422 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr4-5333 chr4 182888825 182889035 + 7.66 0.000 Intergenic Intergenic 28323 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr9-6990 chr9 111825595 111825805 + 7.66 0.000 Intergenic L1MEi|LINE|L1 -30763 NR_109816 158401 Hs.428209 NM_173521 ENSG00000165181 SHOC1 C9orf84|ZIP2|ZIP2H shortage in chiasmata 1 protein-coding chr2-11810 chr2 17042807 17043017 + 7.66 0.000 Intergenic Intergenic -377078 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr5-5027 chr5 85011524 85011734 + 7.66 0.000 Intergenic L1ME2|LINE|L1 -626749 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr3-3883 chr3 40828376 40828586 + 7.66 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 303521 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr7-6517 chr7 29789935 29790145 + 7.66 0.000 Intergenic HERVH-int|LTR|ERV1 -16514 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family member 3 protein-coding chrX-1034 chrX 84907534 84907744 + 7.66 0.000 Intergenic Intergenic -26512 NR_024062 100131816 Hs.460809 NM_178567 ENSG00000229547 UBE2DNL - ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene) pseudo chr1-13793 chr1 18414031 18414241 + 7.66 0.000 Intergenic L2c|LINE|L2 -66794 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr1-14188 chr1 33651242 33651452 + 7.66 0.000 intron (NM_052896, intron 28 of 69) L2c|LINE|L2 178702 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr4-7525 chr4 75385138 75385348 + 7.66 0.000 Intergenic Intergenic 31167 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr14-1977 chr14 43924868 43925078 + 7.66 0.000 Intergenic LTR27C|LTR|ERV1 582310 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr10-9148 chr10 128189592 128189802 + 7.66 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -63274 NM_002417 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chr2-3883 chr2 42048158 42048368 + 7.66 0.000 exon (NM_138370, exon 1 of 7) exon (NM_138370, exon 1 of 7) 242 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr1-8404 chr1 83093968 83094178 + 7.66 0.000 intron (NR_147074, intron 8 of 10) MLT1J1|LTR|ERVL-MaLR -107865 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chr1-13193 chr1 207492951 207493161 + 7.66 0.000 Intergenic L2a|LINE|L2 -3072 NM_000651 1378 Hs.334019 NM_000573 ENSG00000203710 CR1 C3BR|C4BR|CD35|KN complement C3b/C4b receptor 1 (Knops blood group) protein-coding chr12-5672 chr12 94552798 94553008 + 7.66 0.000 Intergenic Intergenic -8886 NR_049885 100847031 NR_049885 ENSG00000266099 MIR5700 - microRNA 5700 ncRNA chr12-3939 chr12 2736270 2736480 + 7.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -45218 NR_045725 100652846 Hs.683896 NR_045725 ENSG00000246627 CACNA1C-AS1 - CACNA1C antisense RNA 1 ncRNA chr13-3294 chr13 48386436 48386646 + 7.66 0.000 intron (NM_000321, intron 17 of 26) Charlie1a|DNA|hAT-Charlie 26572 NM_001162498 10161 Hs.123464 NM_005767 ENSG00000139679 LPAR6 ARWH1|HYPT8|LAH3|P2RY5|P2Y5 lysophosphatidic acid receptor 6 protein-coding chr13-612 chr13 27251603 27251813 + 7.66 0.000 intron (NM_000982, intron 1 of 5) CpG 153 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr4-3274 chr4 126162079 126162289 + 7.66 0.000 Intergenic L1MA3|LINE|L1 654925 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr13-1484 chr13 108305559 108305769 + 7.66 0.000 intron (NM_006573, intron 5 of 5) intron (NM_006573, intron 5 of 5) 36035 NM_001145645 10673 Hs.525157 NM_006573 ENSG00000102524 TNFSF13B BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4 TNF superfamily member 13b protein-coding chr17-5811 chr17 64573939 64574149 + 7.66 0.000 intron (NM_022739, intron 9 of 18) L1PA13|LINE|L1 67067 NM_001316990 90799 Hs.569713 NM_138363 ENSG00000258890 CEP95 CCDC45 centrosomal protein 95 protein-coding chr15-4802 chr15 72383158 72383368 + 7.66 0.000 Intergenic FLAM_C|SINE|Alu 7150 NR_027262 80072 Hs.591113 NM_025005 ENSG00000260339 HEXA-AS1 C15orf34 HEXA antisense RNA 1 ncRNA chr7-4910 chr7 129690728 129690938 + 7.66 0.000 intron (NM_005011, intron 5 of 10) intron (NM_005011, intron 5 of 10) 60755 NM_001040110 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr1-11994 chr1 91891171 91891381 + 7.66 0.000 intron (NM_001195684, intron 2 of 17) AluJb|SINE|Alu -5125 NM_003243 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr1-11763 chr1 21260311 21260521 + 7.66 0.000 intron (NM_001113347, intron 2 of 16) MIRb|SINE|MIR 19199 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr10-7475 chr10 10227113 10227323 + 7.66 0.000 Intergenic L1MEd|LINE|L1 168496 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA chr2-14628 chr2 234763737 234763947 + 7.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 81174 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr7-5419 chr7 35449319 35449529 + 7.66 0.000 Intergenic MIRb|SINE|MIR 135569 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr12-7622 chr12 79638170 79638380 + 7.66 0.000 intron (NM_001354732, intron 2 of 6) intron (NM_001354732, intron 2 of 6) 52305 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr3-3216 chr3 196081996 196082206 + 7.66 0.000 promoter-TSS (NM_003234) promoter-TSS (NM_003234) -11 NM_001313965 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr7-4276 chr7 6525723 6525933 + 7.66 0.000 intron (NM_001145118, intron 4 of 21) intron (NM_001145118, intron 4 of 21) 25608 NM_001145118 392862 Hs.512174 NM_001145118 ENSG00000215045 GRID2IP DELPHILIN Grid2 interacting protein protein-coding chr9-4563 chr9 88312104 88312314 + 7.66 0.000 Intergenic Intergenic -76235 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr7-6780 chr7 23046441 23046651 + 7.66 0.000 Intergenic SVA_D|Retroposon|SVA -32416 NM_001363467 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr6-1944 chr6 111203203 111203413 + 7.66 0.000 intron (NM_018593, intron 3 of 5) intron (NM_018593, intron 3 of 5) -56031 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr7-8770 chr7 79461784 79461994 + 7.66 0.000 non-coding (NR_038343, exon 4 of 4) non-coding (NR_038343, exon 4 of 4) 7929 NR_038343 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chrX-806 chrX 68708951 68709161 + 7.66 0.000 intron (NM_001142504, intron 1 of 13) intron (NM_001142504, intron 1 of 13) 15417 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr1-7071 chr1 184296745 184296955 + 7.66 0.000 Intergenic Intergenic -90179 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr11-7632 chr11 58330936 58331146 + 7.66 0.000 Intergenic L1PA13|LINE|L1 28028 NM_001005489 219965 NM_001005489 ENSG00000197786 OR5B17 OR11-237|OR5B20P olfactory receptor family 5 subfamily B member 17 protein-coding chr5-6173 chr5 57064775 57064985 + 7.66 0.000 Intergenic L1MA9|LINE|L1 -109068 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr6-5662 chr6 96021856 96022066 + 7.66 0.000 intron (NM_006581, intron 1 of 2) intron (NM_006581, intron 1 of 2) 5987 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr6-3395 chr6 62848246 62848456 + 7.66 0.000 Intergenic SATR1|Satellite|Satellite 471626 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr2-10394 chr2 182140741 182140951 + 7.66 0.000 3' UTR (NM_001363871, exon 15 of 15) 3' UTR (NM_001363871, exon 15 of 15) 101217 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr7-7150 chr7 4383910 4384120 + 7.66 0.000 Intergenic Intergenic -249178 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr5-6205 chr5 66808914 66809124 + 7.66 0.000 intron (NM_001290228, intron 3 of 4) intron (NM_001290228, intron 3 of 4) -19754 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr5-2736 chr5 133692821 133693031 + 7.66 0.000 Intergenic L2b|LINE|L2 -80385 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr13-4169 chr13 87975141 87975351 + 7.66 0.000 Intergenic Intergenic -164726 NR_104059 101930749 Hs.539610 NR_104059 ENSG00000223404 LINC00397 - long intergenic non-protein coding RNA 397 ncRNA chr19-4613 chr19 13210244 13210454 + 7.66 0.000 intron (NM_023035, intron 44 of 46) intron (NM_023035, intron 44 of 46) 59938 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr19-4028 chr19 4710700 4710910 + 7.66 0.000 intron (NM_139159, intron 4 of 21) intron (NM_139159, intron 4 of 21) 13037 NM_139159 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr10-7892 chr10 49682275 49682485 + 7.66 0.000 intron (NM_182554, intron 1 of 2) LTR12B|LTR|ERV1 2729 NM_001042427 282966 Hs.131287 NM_182554 ENSG00000178645 C10orf53 - chromosome 10 open reading frame 53 protein-coding chr5-8768 chr5 147902872 147903082 + 7.66 0.000 intron (NM_206966, intron 1 of 3) MIRc|SINE|MIR 3561 NM_206966 389336 Hs.660038 NM_206966 ENSG00000178776 C5orf46 SSSP1 chromosome 5 open reading frame 46 protein-coding chr14-3215 chr14 74212152 74212362 + 7.66 0.000 Intergenic L2c|LINE|L2 -27192 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr19-3330 chr19 6048957 6049167 + 7.66 0.000 intron (NM_000635, intron 1 of 17) intron (NM_000635, intron 1 of 17) 61438 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr16-2504 chr16 89613597 89613807 + 7.66 0.000 intron (NM_001128141, intron 1 of 10) intron (NM_001128141, intron 1 of 10) 394 NM_001128141 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr10-5577 chr10 90482026 90482236 + 7.66 0.000 intron (NR_110657, intron 2 of 6) intron (NR_110657, intron 2 of 6) 58674 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr2-12070 chr2 31837890 31838100 + 7.66 0.000 Intergenic MIR|SINE|MIR -34015 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA chr17-7182 chr17 80799559 80799769 + 7.66 0.000 intron (NM_020761, intron 7 of 33) intron (NM_020761, intron 7 of 33) 5968 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr11-5634 chr11 120620674 120620884 + 7.66 0.000 intron (NM_001282470, intron 1 of 19) intron (NM_001282470, intron 1 of 19) 56343 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr9-5041 chr9 30452274 30452484 + 7.66 0.000 Intergenic Intergenic -43925 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr17-2286 chr17 32206079 32206289 + 7.66 0.000 intron (NM_001033566, intron 16 of 19) intron (NM_001033566, intron 16 of 19) -54613 NR_002222 503640 Hs.631752 NR_002222 ARGFXP2 - arginine-fifty homeobox pseudogene 2 pseudo chr2-11061 chr2 116334154 116334364 + 7.66 0.000 Intergenic L1PA5|LINE|L1 990444 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr9-2289 chr9 130836842 130837052 + 7.66 0.000 intron (NM_005157, intron 1 of 10) intron (NM_005157, intron 1 of 10) 1693 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding KI270781.1-1 KI270781.1 96507 96717 + 7.66 0.000 NA NA NA NA chr11-7834 chr11 113202505 113202715 + 7.66 0.000 intron (NM_181351, intron 2 of 18) intron (NM_181351, intron 2 of 18) 71291 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr18-2497 chr18 56477435 56477645 + 7.66 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 161052 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr7-6555 chr7 51770752 51770962 + 7.66 0.000 Intergenic Intergenic -377601 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr6-5220 chr6 134161163 134161373 + 7.66 0.000 Intergenic Intergenic 13598 NM_001291995 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr1-5628 chr1 21324537 21324747 + 7.66 0.000 intron (NM_001113348, intron 1 of 18) intron (NM_001113348, intron 1 of 18) 20862 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr5-8047 chr5 91701740 91701950 + 7.66 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -318528 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr22-4222 chr22 46515669 46515879 + 7.66 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 21846 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr11-10635 chr11 125916462 125916672 + 7.66 0.000 intron (NM_013264, intron 8 of 11) intron (NM_013264, intron 8 of 11) 12059 NM_013264 29118 Hs.420263 NM_013264 ENSG00000109832 DDX25 GRTH DEAD-box helicase 25 protein-coding chr11-9261 chr11 43944632 43944842 + 7.66 0.000 TTS (NM_001145033) TTS (NM_001145033) 2100 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr15-2592 chr15 62066991 62067201 + 7.66 0.000 intron (NM_207322, intron 1 of 1) intron (NM_207322, intron 1 of 1) 119 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding chr1-13947 chr1 24157964 24158174 + 7.66 0.000 intron (NM_173065, intron 5 of 5) LTR16C|LTR|ERVL -14929 NM_021258 58985 Hs.110915 NM_021258 ENSG00000142677 IL22RA1 CRF2-9|IL22R|IL22R1 interleukin 22 receptor subunit alpha 1 protein-coding chr4-7634 chr4 83287581 83287791 + 7.66 0.000 Intergenic L2a|LINE|L2 -2552 NM_015697 27235 Hs.144304 NM_015697 ENSG00000173085 COQ2 CL640|COQ10D1|MSA1|PHB:PPT coenzyme Q2, polyprenyltransferase protein-coding chr8-7016 chr8 109836916 109837126 + 7.66 0.000 Intergenic Intergenic 138750 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chrX-1801 chrX 87093530 87093740 + 7.66 0.000 Intergenic L1PREC2|LINE|L1 -424167 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr10-3997 chr10 132550508 132550718 + 7.66 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 12826 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chrX-2346 chrX 64386674 64386884 + 7.66 0.000 intron (NM_017677, intron 1 of 13) AluJb|SINE|Alu 8673 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr12-3315 chr12 81080620 81080830 + 7.66 0.000 intron (NM_024560, intron 1 of 15) intron (NM_024560, intron 1 of 15) 2646 NM_024560 79611 Hs.259559 NM_024560 ENSG00000111058 ACSS3 - acyl-CoA synthetase short chain family member 3 protein-coding chr14-3099 chr14 64769830 64770040 + 7.66 0.000 intron (NM_001024858, intron 26 of 34) intron (NM_001024858, intron 26 of 34) 15751 NR_107009 102465841 NR_107009 ENSG00000284269 MIR7855 hsa-mir-7855 microRNA 7855 ncRNA chr6-7006 chr6 21873740 21873950 + 7.66 0.000 intron (NR_015410, intron 4 of 11) L1PB1|LINE|L1 207432 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr8-7292 chr8 131711953 131712163 + 7.66 0.000 Intergenic Kanga1a|DNA|TcMar-Tc2 -192035 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr7-4099 chr7 37921037 37921247 + 7.66 0.000 promoter-TSS (NM_001242948) promoter-TSS (NM_001242948) -177 NM_001242948 54749 Hs.563491 NM_017549 ENSG00000086289 EPDR1 EPDR|MERP-1|MERP1|UCC1 ependymin related 1 protein-coding chr11-8788 chr11 10581509 10581719 + 7.66 0.000 intron (NM_001100163, intron 19 of 20) intron (NM_001100163, intron 19 of 20) -12949 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr4-7508 chr4 74503287 74503497 + 7.66 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR 58256 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr16-4978 chr16 3926200 3926410 + 7.66 0.000 Intergenic L1MC1|LINE|L1 24139 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr6-3858 chr6 43665231 43665441 + 7.66 0.000 intron (NM_152732, intron 4 of 4) intron (NM_152732, intron 4 of 4) 20300 NM_152732 221421 Hs.534585 NM_152732 ENSG00000172426 RSPH9 C6orf206|CILD12|MRPS18AL1 radial spoke head 9 homolog protein-coding chr17-2480 chr17 74889795 74890005 + 7.66 0.000 intron (NM_178128, intron 2 of 5) AluSx1|SINE|Alu 3733 NM_178128 283985 Hs.448845 NM_178128 ENSG00000172782 FADS6 FP18279 fatty acid desaturase 6 protein-coding chr9-3758 chr9 124118761 124118971 + 7.66 0.000 Intergenic LTR33|LTR|ERVL 107098 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr20-2344 chr20 13644230 13644440 + 7.66 0.000 Intergenic L1PA15|LINE|L1 -5399 NR_136631 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr8-3032 chr8 133092945 133093155 + 7.66 0.000 intron (NM_001045556, intron 1 of 8) intron (NM_001045556, intron 1 of 8) 9552 NM_001282965 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr19-2901 chr19 49461832 49462042 + 7.66 0.000 exon (NM_153329, exon 7 of 17) exon (NM_153329, exon 7 of 17) 8712 NM_001145396 126133 Hs.719998 NM_153329 ENSG00000161618 ALDH16A1 - aldehyde dehydrogenase 16 family member A1 protein-coding chr16-1406 chr16 993878 994088 + 7.66 0.000 Intergenic (CACC)n|Simple_repeat|Simple_repeat 12213 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr1-4227 chr1 158760863 158761073 + 7.66 0.000 Intergenic AluY|SINE|Alu 5714 NM_001005185 128372 Hs.553592 NM_001005185 ENSG00000197403 OR6N1 OR1-22 olfactory receptor family 6 subfamily N member 1 protein-coding chr10-4178 chr10 97190268 97190478 + 7.66 0.000 intron (NR_037909, intron 11 of 14) intron (NR_037909, intron 11 of 14) -4414 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr13-2966 chr13 59189403 59189613 + 7.66 0.000 Intergenic Intergenic -823210 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr17-6683 chr17 77676075 77676285 + 7.66 0.000 Intergenic Intergenic 52379 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr11-6441 chr11 66576068 66576278 + 7.66 0.000 Intergenic HERVH-int|LTR|ERV1 -7567 NM_003793 8722 Hs.11590 NM_003793 ENSG00000174080 CTSF CATSF|CLN13 cathepsin F protein-coding chr6-6859 chr6 9904894 9905104 + 7.66 0.000 Intergenic Intergenic -499503 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr22-4058 chr22 42296914 42297124 + 7.66 0.000 Intergenic MIR|SINE|MIR -13092 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr1-11390 chr1 48853186 48853396 + 7.66 0.000 intron (NR_136623, intron 5 of 12) MLT1F|LTR|ERVL-MaLR -76322 NM_001349793 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr7-7461 chr7 90064540 90064750 + 7.66 0.000 intron (NR_110029, intron 2 of 2) Tigger3b|DNA|TcMar-Tigger -54755 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr15-2439 chr15 74820195 74820405 + 7.66 0.000 intron (NM_021819, intron 7 of 13) intron (NM_021819, intron 7 of 13) -6327 NM_001030005 594855 Hs.187694 NM_001030005 ENSG00000213578 CPLX3 CPX-III|CPXIII|Nbla11589 complexin 3 protein-coding chr3-5846 chr3 32863761 32863971 + 7.66 0.000 intron (NM_001039111, intron 1 of 3) AluSx1|SINE|Alu 45869 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr1-13813 chr1 19190470 19190680 + 7.66 0.000 intron (NM_020765, intron 11 of 105) L2a|LINE|L2 19691 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr1-6868 chr1 112758017 112758227 + 7.66 0.000 Intergenic Intergenic 37555 NM_182759 284467 Hs.439116 NM_182759 ENSG00000184599 TAFA3 FAM19A3|TAFA-3 TAFA chemokine like family member 3 protein-coding KQ031389.1-1 KQ031389.1 161316 161526 + 7.66 0.000 NA NA NA NA chrX-2567 chrX 101775368 101775578 + 7.66 0.000 Intergenic L1MA1|LINE|L1 82104 NR_159736 55998 Hs.307077 NM_032946 ENSG00000126952 NXF5 - nuclear RNA export factor 5 protein-coding chr11-4129 chr11 43933682 43933892 + 7.66 0.000 Intergenic Intergenic -8850 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr17-7889 chr17 43368346 43368556 + 7.66 0.000 Intergenic AluSx3|SINE|Alu 20447 NR_027413 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chr12-3843 chr12 95995221 95995431 + 7.66 0.000 intron (NM_002108, intron 2 of 20) intron (NM_002108, intron 2 of 20) 1018 NM_002108 3034 Hs.190783 NM_002108 ENSG00000084110 HAL HIS|HSTD histidine ammonia-lyase protein-coding chr11-9900 chr11 74842206 74842416 + 7.66 0.000 3' UTR (NM_182969, exon 19 of 19) 3' UTR (NM_182969, exon 19 of 19) 93462 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr8-7172 chr8 123612285 123612495 + 7.66 0.000 Intergenic L1MD3|LINE|L1 41411 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr3-4647 chr3 32774701 32774911 + 7.66 0.000 TTS (NM_001256742) TTS (NM_001256742) -43191 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr2-13942 chr2 184828919 184829129 + 7.66 0.000 intron (NM_194250, intron 1 of 3) intron (NM_194250, intron 1 of 3) 230495 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr11-10559 chr11 121645054 121645264 + 7.66 0.000 Intergenic Intergenic 192845 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr20-3245 chr20 63924841 63925051 + 7.66 0.000 intron (NM_025219, intron 1 of 4) LTR27|LTR|ERV1 5078 NR_030638 100126339 NR_030638 ENSG00000216141 MIR941-2 MIRN941-2 microRNA 941-2 ncRNA chr19-5334 chr19 3783657 3783867 + 7.66 0.000 intron (NM_139354, intron 5 of 12) intron (NM_139354, intron 5 of 12) 2619 NM_139355 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr1-16695 chr1 245928184 245928394 + 7.66 0.000 intron (NM_022743, intron 6 of 11) intron (NM_022743, intron 6 of 11) 489123 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr7-5912 chr7 97739221 97739431 + 7.66 0.000 intron (NM_013997, intron 5 of 5) MER58A|DNA|hAT-Charlie 7240 NM_013996 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding chr12-8359 chr12 132063706 132063916 + 7.66 0.000 intron (NM_015409, intron 47 of 52) MER3|DNA|hAT-Charlie -20472 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400P1 EP400NL EP400 pseudogene 1 pseudo chr14-3466 chr14 101233628 101233838 + 7.66 0.000 Intergenic Intergenic 112877 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr2-7956 chr2 62733815 62734025 + 7.66 0.000 intron (NM_001142615, intron 2 of 22) L1MC2|LINE|L1 27023 NM_001354217 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr14-3687 chr14 101540625 101540835 + 7.66 0.000 Intergenic Intergenic 19692 NR_152590 64150 Hs.525597 NR_002770 ENSG00000258498 DIO3OS C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041 DIO3 opposite strand upstream RNA ncRNA chr3-6525 chr3 116029812 116030022 + 7.66 0.000 intron (NM_001318915, intron 2 of 8) intron (NM_001318915, intron 2 of 8) -124791 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr14-3089 chr14 64234904 64235114 + 7.66 0.000 exon (NM_001271876, exon 7 of 8) exon (NM_001271876, exon 7 of 8) 19055 NM_182910 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr14-2228 chr14 104119750 104119960 + 7.66 0.000 Intergenic Intergenic -2352 NR_039859 100616173 NR_039859 ENSG00000283165 MIR203B MIR3545|hsa-mir-203b microRNA 203b ncRNA chr4-4853 chr4 111006787 111006997 + 7.66 0.000 Intergenic L2|LINE|L2 -146245 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr8-3772 chr8 24710318 24710528 + 7.66 0.000 Intergenic L2c|LINE|L2 -161805 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr19-1875 chr19 19544699 19544909 + 7.66 0.000 exon (NM_153221, exon 8 of 8) exon (NM_153221, exon 8 of 8) 6539 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr1-16208 chr1 208357763 208357973 + 7.66 0.000 Intergenic Intergenic -113484 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr10-6687 chr10 114771764 114771974 + 7.66 0.000 intron (NR_120628, intron 1 of 2) intron (NR_120628, intron 1 of 2) -3565 NM_001322885 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr14-4963 chr14 75041429 75041639 + 7.66 0.000 intron (NM_014381, intron 4 of 11) AluSp|SINE|Alu 9933 NM_014381 27030 Hs.436650 NM_014381 ENSG00000119684 MLH3 HNPCC7 mutL homolog 3 protein-coding chrX-4145 chrX 30023538 30023748 + 7.66 0.000 Intergenic Intergenic -191920 NM_002364 4113 Hs.113824 NM_002364 ENSG00000099399 MAGEB2 CT3.2|DAM6|MAGE-XP-2 MAGE family member B2 protein-coding chr9-5656 chr9 122264826 122265036 + 7.66 0.000 promoter-TSS (NM_138777) promoter-TSS (NM_138777) 49 NM_001346345 92399 Hs.368011 NM_138777 ENSG00000148187 MRRF MRFF|MTRRF|RRF mitochondrial ribosome recycling factor protein-coding chr1-15877 chr1 182784787 182784997 + 7.66 0.000 Intergenic Intergenic -4557 NM_001200052 80896 Hs.496969 NM_030769 ENSG00000135838 NPL C112|C1orf13|NAL|NPL1 N-acetylneuraminate pyruvate lyase protein-coding chr11-6515 chr11 68967419 68967629 + 7.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 13462 NM_198923 116512 Hs.527802 NM_198923 ENSG00000172938 MRGPRD MRGD|TGR7 MAS related GPR family member D protein-coding chr12-4452 chr12 12971977 12972187 + 7.66 0.000 intron (NR_149063, intron 2 of 3) intron (NR_149063, intron 2 of 3) -7755 NR_038920 100506314 Hs.127718 NR_038920 ENSG00000247498 GPRC5D-AS1 - GPRC5D and HEBP1 antisense RNA 1 ncRNA chr14-1721 chr14 33992081 33992291 + 7.66 0.000 Intergenic Intergenic -41112 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr20-1087 chr20 53934520 53934730 + 7.66 0.000 Intergenic Intergenic -58916 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr12-5695 chr12 108492404 108492614 + 7.66 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -18820 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr4-3124 chr4 169062566 169062776 + 7.66 0.000 Intergenic Intergenic -52416 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr11-5330 chr11 60934085 60934295 + 7.66 0.000 intron (NM_178031, intron 8 of 10) intron (NM_178031, intron 8 of 10) 9730 NM_017870 54972 Hs.118552 NM_017870 ENSG00000006118 TMEM132A GBP|HSPA5BP1 transmembrane protein 132A protein-coding chr1-2491 chr1 162069640 162069850 + 7.66 0.000 promoter-TSS (NM_001164757) promoter-TSS (NM_001164757) 54 NM_001164757 9722 Hs.731942 NM_014697 ENSG00000198929 NOS1AP 6330408P19Rik|CAPON nitric oxide synthase 1 adaptor protein protein-coding chrX-4966 chrX 113796599 113796809 + 7.66 0.000 intron (NR_131204, intron 1 of 2) THE1A-int|LTR|ERVL-MaLR 141514 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr16-2061 chr16 72958103 72958313 + 7.66 0.000 exon (NM_006885, exon 2 of 10) exon (NM_006885, exon 2 of 10) 89920 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr8-3637 chr8 2937589 2937799 + 7.66 0.000 3' UTR (NM_033225, exon 70 of 70) 3' UTR (NM_033225, exon 70 of 70) -209243 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chrX-990 chrX 10579700 10579910 + 7.66 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) -2888 NM_001193277 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr10-4541 chr10 98225450 98225660 + 7.66 0.000 intron (NM_001256619, intron 6 of 10) intron (NM_001256619, intron 6 of 10) 42639 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chrX-560 chrX 39012624 39012834 + 7.66 0.000 Intergenic Intergenic -208846 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr3-7356 chr3 51246014 51246224 + 7.66 0.000 intron (NM_004947, intron 21 of 52) intron (NM_004947, intron 21 of 52) -139172 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr17-7053 chr17 62688384 62688594 + 7.66 0.000 intron (NM_006039, intron 21 of 29) intron (NM_006039, intron 21 of 29) -17717 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr9-4683 chr9 124106011 124106221 + 7.66 0.000 Intergenic Intergenic 94348 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr11-7193 chr11 131451753 131451963 + 7.66 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 81243 NM_001352006 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr6-3659 chr6 142908695 142908905 + 7.66 0.000 intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 36376 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr19-6230 chr19 6303473 6303683 + 7.66 0.000 Intergenic Charlie4z|DNA|hAT-Charlie -23603 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr1-9289 chr1 25871401 25871611 + 7.66 0.000 promoter-TSS (NM_178422) promoter-TSS (NM_178422) -253 NM_178422 164091 Hs.523652 NM_178422 ENSG00000182749 PAQR7 MPRA|PGLP|mSR progestin and adipoQ receptor family member 7 protein-coding chr13-2132 chr13 98483325 98483535 + 7.66 0.000 intron (NM_001032296, intron 2 of 10) intron (NM_001032296, intron 2 of 10) 38695 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr10-5865 chr10 115118451 115118661 + 7.66 0.000 intron (NR_074088, intron 2 of 9) L1MEg|LINE|L1 25191 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr17-6015 chr17 78322788 78322998 + 7.66 0.000 Intergenic Intergenic 37186 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr12-5248 chr12 109072650 109072860 + 7.66 0.000 intron (NM_001301175, intron 9 of 15) intron (NM_001301175, intron 9 of 15) -18790 NR_038996 100131733 Hs.660996 NR_038996 USP30-AS1 - USP30 antisense RNA 1 ncRNA chrX-2238 chrX 45824639 45824849 + 7.66 0.000 Intergenic Intergenic 26746 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chrX-3364 chrX 144505744 144505954 + 7.66 0.000 Intergenic LTR78B|LTR|ERV1 621778 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr1-5437 chr1 39919445 39919655 + 7.66 0.000 Intergenic MER41A|LTR|ERV1 -17633 NM_005376 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 MYCL proto-oncogene, bHLH transcription factor protein-coding chr4-2460 chr4 187940355 187940565 + 7.66 0.000 Intergenic Intergenic -55311 NM_174900 132625 Hs.335787 NM_174900 ENSG00000179059 ZFP42 REX-1|REX1|ZNF754|zfp-42 ZFP42 zinc finger protein protein-coding chr7-7561 chr7 118825484 118825694 + 7.66 0.000 Intergenic Intergenic 600885 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr15-2612 chr15 65415117 65415327 + 7.66 0.000 intron (NM_020962, intron 1 of 19) intron (NM_020962, intron 1 of 19) 7725 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr10-8294 chr10 77431068 77431278 + 7.66 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 80301 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr1-9821 chr1 60558527 60558737 + 7.66 0.000 intron (NR_146508, intron 4 of 7) intron (NR_146508, intron 4 of 7) 64053 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr5-7661 chr5 53676433 53676643 + 7.66 0.000 intron (NR_134474, intron 5 of 5) Tigger17a|DNA|TcMar-Tigger 115899 NR_134475 4724 Hs.528222 NM_002495 ENSG00000164258 NDUFS4 AQDQ|CI-18|CI-18 kDa|CI-AQDQ|MC1DN1 NADH:ubiquinone oxidoreductase subunit S4 protein-coding chr4-5977 chr4 178241723 178241933 + 7.66 0.000 Intergenic MER52D|LTR|ERV1 -333892 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr19-2615 chr19 2755013 2755223 + 7.66 0.000 3' UTR (NM_003021, exon 12 of 12) 3' UTR (NM_003021, exon 12 of 12) -15042 NM_213568 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr2-12482 chr2 61803064 61803274 + 7.66 0.000 Intergenic Intergenic 50891 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr10-8823 chr10 109306769 109306979 + 7.66 0.000 Intergenic MER4E|LTR|ERV1 616372 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr3-9032 chr3 22277765 22277975 + 7.66 0.000 Intergenic L2b|LINE|L2 320731 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr2-4759 chr2 19863293 19863503 + 7.66 0.000 Intergenic Intergenic -5456 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr8-4108 chr8 70118585 70118795 + 7.66 0.000 intron (NM_001321711, intron 21 of 21) AluSq2|SINE|Alu -47438 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr8-6627 chr8 77325179 77325389 + 7.66 0.000 Intergenic MLT2B1|LTR|ERVL -125413 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr6-3879 chr6 53984276 53984486 + 7.66 0.000 intron (NR_125842, intron 2 of 3) intron (NR_125842, intron 2 of 3) -14509 NR_046832 100874282 Hs.571169 NR_046832 ENSG00000236996 MLIP-IT1 - MLIP intronic transcript 1 ncRNA chr1-16319 chr1 217018212 217018422 + 7.66 0.000 intron (NM_001243509, intron 1 of 8) intron (NM_001243509, intron 1 of 8) 58675 NM_001243509 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr10-5659 chr10 97723235 97723445 + 7.66 0.000 Intergenic MIRb|SINE|MIR 9610 NM_031484 83742 Hs.744073 NM_031484 ENSG00000155254 MARVELD1 GB14|MARVD1|MRVLDC1|bA548K23.8 MARVEL domain containing 1 protein-coding chr5-4765 chr5 53727806 53728016 + 7.66 0.000 Intergenic MER21A|LTR|ERVL 91771 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr2-11308 chr2 196377543 196377753 + 7.66 0.000 intron (NM_020760, intron 2 of 28) THE1B|LTR|ERVL-MaLR -15471 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr4-3316 chr4 184168405 184168615 + 7.66 0.000 intron (NM_153343, intron 1 of 7) intron (NM_153343, intron 1 of 7) 49363 NM_153343 133121 Hs.297814 NM_153343 ENSG00000164303 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding chr3-7520 chr3 173004348 173004558 + 7.66 0.000 intron (NM_031955, intron 4 of 10) intron (NM_031955, intron 4 of 10) 136782 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr12-7719 chr12 91550913 91551123 + 7.66 0.000 Intergenic L1PA13|LINE|L1 -368201 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr14-3282 chr14 82371225 82371435 + 7.66 0.000 Intergenic L1MA2|LINE|L1 -271302 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr12-7556 chr12 72267996 72268206 + 7.66 0.000 intron (NR_026836, intron 2 of 2) intron (NR_026836, intron 2 of 2) -4648 NM_013381 29953 Hs.199814 NM_013381 ENSG00000072657 TRHDE PAP-II|PGPEP2|TRH-DE thyrotropin releasing hormone degrading enzyme protein-coding chr18-792 chr18 48952711 48952921 + 7.66 0.000 Intergenic CpG -2105 NM_001190821 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr6-4915 chr6 97294704 97294914 + 7.66 0.000 Intergenic L1MEf|LINE|L1 -10777 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr14-582 chr14 20975062 20975272 + 7.66 0.000 Intergenic AluJb|SINE|Alu -14813 NM_001029991 64745 Hs.512693 NM_022734 ENSG00000165792 METTL17 METT11D1 methyltransferase like 17 protein-coding chr18-2017 chr18 43446267 43446477 + 7.66 0.000 Intergenic Intergenic -168882 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr4-5718 chr4 40994591 40994801 + 7.66 0.000 intron (NM_004307, intron 6 of 17) AluSc8|SINE|Alu -137504 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr11-9995 chr11 78979361 78979571 + 7.66 0.000 intron (NM_001098816, intron 6 of 33) L2b|LINE|L2 -404602 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr16-3087 chr16 66643267 66643477 + 7.66 0.000 intron (NM_181521, intron 1 of 3) Arthur1|DNA|hAT-Tip100 38641 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr2-7025 chr2 151238870 151239080 + 7.66 0.000 Intergenic Intergenic 22888 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr2-5040 chr2 240090044 240090254 + 7.66 0.000 Intergenic L1MC5|LINE|L1 -44077 NM_173351 150681 Hs.626616 NM_173351 ENSG00000178586 OR6B3 OR6B3P|OR6B3Q olfactory receptor family 6 subfamily B member 3 protein-coding chr2-9499 chr2 236629263 236629473 + 7.66 0.000 Intergenic Intergenic 59543 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr16-3838 chr16 63902492 63902702 + 7.66 0.000 Intergenic Intergenic 1219466 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr9-7780 chr9 78094777 78094987 + 7.66 0.000 Intergenic L2a|LINE|L2 -63071 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chrX-3299 chrX 111086714 111086924 + 7.66 0.000 intron (NM_001128166, intron 2 of 15) MamRep434|DNA|TcMar-Tigger -9372 NM_001324326 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr16-2039 chr16 49932673 49932883 + 7.66 0.000 Intergenic Intergenic -74859 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr7-8653 chr7 71333605 71333815 + 7.66 0.000 intron (NM_022479, intron 1 of 10) AluSx|SINE|Alu -25940 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr7-5568 chr7 47349643 47349853 + 7.66 0.000 intron (NM_022748, intron 17 of 30) intron (NM_022748, intron 17 of 30) 115055 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr7-8714 chr7 75039259 75039469 + 7.66 0.000 intron (NM_148842, intron 10 of 10) intron (NM_148842, intron 10 of 10) 34438 NM_001363447 81554 Hs.529623 NM_030798 ENSG00000274523 RCC1L WBSCR16 RCC1 like protein-coding chr18-3162 chr18 42525971 42526181 + 7.66 0.000 intron (NR_046454, intron 6 of 6) intron (NR_046454, intron 6 of 6) 339408 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr6-6381 chr6 75575766 75575976 + 7.66 0.000 Intergenic L1PA10|LINE|L1 -25638 NM_001304792 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding JH159137.1-1 JH159137.1 11812 12022 + 7.66 0.000 NA NA NA NA chr11-7115 chr11 123624930 123625140 + 7.66 0.000 3' UTR (NM_001286563, exon 21 of 21) 3' UTR (NM_001286563, exon 21 of 21) 29572 NM_001040151 55800 Hs.4865 NM_018400 ENSG00000166257 SCN3B ATFB16|BRGDA7|HSA243396|SCNB3 sodium voltage-gated channel beta subunit 3 protein-coding chr10-7168 chr10 103818658 103818868 + 7.66 0.000 intron (NM_014631, intron 1 of 13) intron (NM_014631, intron 1 of 13) 36643 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr9-7210 chr9 137716676 137716886 + 7.66 0.000 exon (NM_024757, exon 3 of 27) exon (NM_024757, exon 3 of 27) 71625 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr11-10366 chr11 111459571 111459781 + 7.66 0.000 Intergenic Intergenic -41490 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr18-3127 chr18 38025715 38025925 + 7.66 0.000 Intergenic Intergenic 368685 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr16-6153 chr16 23222387 23222597 + 7.66 0.000 Intergenic AluSq|SINE|Alu 39747 NM_001039 6340 Hs.371727 NM_001039 ENSG00000166828 SCNN1G BESC3|ENaCg|ENaCgamma|LDLS2|PHA1|SCNEG sodium channel epithelial 1 gamma subunit protein-coding chr9-5569 chr9 111909271 111909481 + 7.66 0.000 intron (NM_003358, intron 1 of 8) intron (NM_003358, intron 1 of 8) 12562 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr1-10122 chr1 101022481 101022691 + 7.66 0.000 intron (NM_001077394, intron 2 of 7) intron (NM_001077394, intron 2 of 7) 3198 NM_001077395 51611 Hs.440776 NM_015958 ENSG00000117543 DPH5 AD-018|CGI-30|HSPC143|NPD015 diphthamide biosynthesis 5 protein-coding chr16-2712 chr16 87060221 87060431 + 7.66 0.000 non-coding (NR_126008, exon 1 of 3) non-coding (NR_126008, exon 1 of 3) 2542 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr13-3564 chr13 25557393 25557603 + 7.66 0.000 intron (NM_016529, intron 13 of 36) intron (NM_016529, intron 13 of 36) 88724 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr12-3406 chr12 106274735 106274945 + 7.66 0.000 Intergenic MER63D|DNA|hAT-Blackjack -26820 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chrX-2587 chrX 104569373 104569583 + 7.66 0.000 intron (NM_017416, intron 1 of 10) intron (NM_017416, intron 1 of 10) 3279 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr4-7553 chr4 77563066 77563276 + 7.66 0.000 intron (NM_006419, intron 1 of 4) LTR12C|LTR|ERV1 51418 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chrX-631 chrX 115561081 115561291 + 7.66 0.000 promoter-TSS (NM_005032) promoter-TSS (NM_005032) 12 NM_005032 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr7-3329 chr7 73594102 73594312 + 7.66 0.000 intron (NM_032951, intron 16 of 16) intron (NM_032951, intron 16 of 16) -15628 NM_001362662 26608 Hs.647044 NM_012453 ENSG00000106638 TBL2 WBSCR13|WS-betaTRP transducin beta like 2 protein-coding chr2-12237 chr2 43943903 43944113 + 7.66 0.000 intron (NM_133259, intron 22 of 37) intron (NM_133259, intron 22 of 37) 51981 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr5-3048 chr5 20276454 20276664 + 7.66 0.000 intron (NM_001349556, intron 1 of 13) L1MA3|LINE|L1 -28992 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA chr2-12247 chr2 44300399 44300609 + 7.66 0.000 intron (NM_000341, intron 5 of 9) intron (NM_000341, intron 5 of 9) 25024 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding chr17-4740 chr17 40016377 40016587 + 7.66 0.000 intron (NR_033662, intron 2 of 3) intron (NR_033662, intron 2 of 3) 1042 NM_000759 1440 Hs.2233 NM_000759 ENSG00000108342 CSF3 C17orf33|CSF3OS|GCSF colony stimulating factor 3 protein-coding chr2-4617 chr2 149388357 149388567 + 7.66 0.000 intron (NM_194317, intron 1 of 4) intron (NM_194317, intron 1 of 4) 57875 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr4-7691 chr4 88060528 88060738 + 7.66 0.000 intron (NM_000297, intron 9 of 14) intron (NM_000297, intron 9 of 14) 52998 NM_000297 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr7-9244 chr7 121745575 121745785 + 7.66 0.000 Intergenic MER5A|DNA|hAT-Charlie -127481 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr10-6400 chr10 5954325 5954535 + 7.66 0.000 intron (NM_001351095, intron 6 of 6) intron (NM_001351095, intron 6 of 6) 14498 NM_001351096 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr10-3125 chr10 42836851 42837061 + 7.66 0.000 Intergenic CpG -34565 NR_134479 101929445 Hs.376403 NR_134479 ENSG00000234944 LINC02623 - long intergenic non-protein coding RNA 2623 ncRNA chr5-4147 chr5 91381763 91381973 + 7.66 0.000 intron (NR_027435, intron 1 of 2) intron (NR_027435, intron 1 of 2) 1449 NM_001329672 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr12-7887 chr12 106589570 106589780 + 7.66 0.000 intron (NM_213594, intron 1 of 17) intron (NM_213594, intron 1 of 17) 6768 NM_213594 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr4-6437 chr4 136062584 136062794 + 7.66 0.000 Intergenic Intergenic -149009 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr10-6262 chr10 78393070 78393280 + 7.66 0.000 Intergenic LTR16E1|LTR|ERVL 125833 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr17-8067 chr17 51539533 51539743 + 7.66 0.000 Intergenic MER96B|DNA|hAT-Tip100 104211 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr3-10650 chr3 148681393 148681603 + 7.66 0.000 Intergenic Intergenic -16373 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr2-2349 chr2 203328230 203328440 + 7.66 0.000 promoter-TSS (NM_001282925) promoter-TSS (NM_001282925) -59 NM_001282926 10152 Hs.471156 NM_005759 ENSG00000138443 ABI2 ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB abl interactor 2 protein-coding chr9-3509 chr9 26919753 26919963 + 7.66 0.000 intron (NM_001321546, intron 8 of 12) intron (NM_001321546, intron 8 of 12) -27030 NM_001167575 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr1-15141 chr1 103561782 103561992 + 7.66 0.000 intron (NM_020978, intron 1 of 11) intron (NM_020978, intron 1 of 11) 7243 NM_020978 280 Hs.484588 NM_020978 ENSG00000240038 AMY2B AMY2|AMY3|HXA amylase alpha 2B (pancreatic) protein-coding chr3-8498 chr3 129180640 129180850 + 7.66 0.000 intron (NM_001127196, intron 1 of 4) intron (NM_001127196, intron 1 of 4) 3151 NM_001127194 7555 Hs.518249 NM_003418 ENSG00000169714 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger nucleic acid binding protein protein-coding chr1-7489 chr1 109772159 109772369 + 7.66 0.000 Intergenic MIRc|SINE|MIR -8341 NM_001319952 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr21-832 chr21 44312014 44312224 + 7.66 0.000 exon (NM_002626, exon 4 of 22) exon (NM_002626, exon 4 of 22) 12066 NM_002626 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr1-7482 chr1 96747690 96747900 + 7.66 0.000 intron (NM_001300990, intron 2 of 12) intron (NM_001300990, intron 2 of 12) 25157 NR_125356 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr7-6946 chr7 95717244 95717454 + 7.66 0.000 Intergenic L1MD1|LINE|L1 -55157 NM_001278422 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr15-2975 chr15 51093197 51093407 + 7.66 0.000 intron (NM_001311175, intron 1 of 1) intron (NM_001311175, intron 1 of 1) 1604 NM_001311175 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr19-5317 chr19 2745785 2745995 + 7.66 0.000 Intergenic L1MC3|LINE|L1 -5814 NM_213568 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr18-1675 chr18 70048232 70048442 + 7.66 0.000 intron (NM_001318520, intron 38 of 47) intron (NM_001318520, intron 38 of 47) -91538 NM_006566 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr2-10909 chr2 71551760 71551970 + 7.66 0.000 intron (NM_001130985, intron 19 of 54) MIR1_Amn|SINE|MIR 85166 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr15-3931 chr15 38667659 38667869 + 7.66 0.000 Intergenic Intergenic -28834 NR_160786 chr9-7055 chr9 124022988 124023198 + 7.66 0.000 intron (NM_004789, intron 4 of 4) intron (NM_004789, intron 4 of 4) 11325 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr20-2423 chr20 23419466 23419676 + 7.66 0.000 intron (NM_001283026, intron 1 of 9) intron (NM_001283026, intron 1 of 9) 1917 NR_104266 63908 Hs.269471 NM_022080 ENSG00000125814 NAPB SNAP-BETA|SNAPB NSF attachment protein beta protein-coding chr4-2386 chr4 47734184 47734394 + 7.66 0.000 intron (NM_006587, intron 5 of 21) intron (NM_006587, intron 5 of 21) 81620 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA chr14-4331 chr14 22817078 22817288 + 7.66 0.000 intron (NM_001126106, intron 1 of 10) AluSz6|SINE|Alu -1285 NM_001126105 9056 Hs.513147 NM_003982 ENSG00000155465 SLC7A7 LAT3|LPI|MOP-2|Y+LAT1|y+LAT-1 solute carrier family 7 member 7 protein-coding chr1-13283 chr1 228812906 228813116 + 7.66 0.000 Intergenic L1MB3|LINE|L1 77532 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr19-4454 chr19 4935761 4935971 + 7.66 0.000 intron (NM_001290051, intron 5 of 16) intron (NM_001290051, intron 5 of 16) 3179 NR_039902 100616337 NR_039902 ENSG00000263409 MIR4747 mir-4747 microRNA 4747 ncRNA chr10-3716 chr10 112967286 112967496 + 7.66 0.000 intron (NM_001367943, intron 4 of 14) intron (NM_001367943, intron 4 of 14) 17141 NM_001198530 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr3-10170 chr3 117178603 117178813 + 7.66 0.000 Intergenic Intergenic 257277 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr6-4668 chr6 52724071 52724281 + 7.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 20983 NR_033760 730152 Hs.739662 NR_033760 GSTA7P GSTAP2|GSTAP6 glutathione S-transferase alpha 7, pseudogene pseudo chr10-5472 chr10 79433507 79433717 + 7.66 0.000 intron (NM_153367, intron 1 of 3) intron (NM_153367, intron 1 of 3) 12012 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr7-6475 chr7 4817204 4817414 + 7.66 0.000 exon (NM_018059, exon 7 of 15) exon (NM_018059, exon 7 of 15) 20141 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr1-9906 chr1 71017437 71017647 + 7.66 0.000 intron (NM_198719, intron 1 of 3) MSTA|LTR|ERVL-MaLR -28964 NR_038420 100132618 Hs.720513 NR_038420 ZRANB2-AS1 - ZRANB2 antisense RNA 1 ncRNA chr10-5015 chr10 33296177 33296387 + 7.66 0.000 intron (NM_001244973, intron 2 of 16) intron (NM_001244973, intron 2 of 16) 38385 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr15-1474 chr15 26713845 26714055 + 7.66 0.000 intron (NM_001278631, intron 3 of 9) intron (NM_001278631, intron 3 of 9) 2815 NM_001191320 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr6-7028 chr6 24140285 24140495 + 7.66 0.000 intron (NM_080723, intron 3 of 3) intron (NM_080723, intron 3 of 3) 14175 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr6-1675 chr6 5085827 5086037 + 7.66 0.000 exon (NM_001145115, exon 1 of 1) exon (NM_001145115, exon 1 of 1) 446 NM_001145115 648791 Hs.653089 NM_001145115 ENSG00000219607 PPP1R3G - protein phosphatase 1 regulatory subunit 3G protein-coding chr2-8105 chr2 77557839 77558049 + 7.66 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -35511 NM_001282924 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr5-4195 chr5 112353881 112354091 + 7.66 0.000 intron (NM_001347887, intron 1 of 23) MER5B|DNA|hAT-Charlie 65291 NM_022140 64097 Hs.584954 NM_022140 ENSG00000129595 EPB41L4A EPB41L4|NBL4 erythrocyte membrane protein band 4.1 like 4A protein-coding chr8-4240 chr8 90105447 90105657 + 7.66 0.000 Intergenic L1MCa|LINE|L1 -22673 NM_001366795 793 Hs.65425 NM_004929 ENSG00000104327 CALB1 CALB|D-28K calbindin 1 protein-coding chr2-9386 chr2 230830444 230830654 + 7.66 0.000 Intergenic LTR8|LTR|ERV1 -33636 NM_001287241 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr10-3567 chr10 79995864 79996074 + 7.66 0.000 Intergenic L1PA14|LINE|L1 -46864 NM_003019 6441 Hs.253495 NM_003019 ENSG00000133661 SFTPD COLEC7|PSP-D|SFTP4|SP-D surfactant protein D protein-coding chr16-6690 chr16 70334301 70334511 + 7.66 0.000 3' UTR (NM_001257174, exon 10 of 10) 3' UTR (NM_001257174, exon 10 of 10) 12341 NR_039997 100506083 Hs.635008 NR_039997 ENSG00000261777 LOC100506083 - uncharacterized LOC100506083 ncRNA chr2-11097 chr2 127873802 127874012 + 7.66 0.000 exon (NM_031445, exon 3 of 8) exon (NM_031445, exon 3 of 8) 10953 NM_031445 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr16-6795 chr16 78608344 78608554 + 7.66 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 508795 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr14-1982 chr14 49733027 49733237 + 7.66 0.000 intron (NM_172193, intron 9 of 12) intron (NM_172193, intron 9 of 12) -35021 NM_014315 23588 Hs.509264 NM_014315 ENSG00000165516 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding chr14-4460 chr14 34018534 34018744 + 7.66 0.000 Intergenic Intergenic -67565 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr12-3112 chr12 27667701 27667911 + 7.66 0.000 intron (NM_003622, intron 13 of 29) MLT1G1|LTR|ERVL-MaLR -28641 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr1-5841 chr1 235075323 235075533 + 7.66 0.000 Intergenic Intergenic -5610 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA chr12-6379 chr12 67701137 67701347 + 7.66 0.000 Intergenic AluJr|SINE|Alu 28233 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr11-7356 chr11 67748315 67748525 + 7.66 0.000 Intergenic Intergenic 56916 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr2-10561 chr2 240032831 240033041 + 7.66 0.000 Intergenic Intergenic -2507 NM_001005853 389090 Hs.531343 NM_001005853 ENSG00000182083 OR6B2 OR2-1|OR6B2P olfactory receptor family 6 subfamily B member 2 protein-coding chr14-4434 chr14 32740582 32740792 + 7.66 0.000 intron (NM_004274, intron 11 of 13) L1MA2|LINE|L1 -198192 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr7-9239 chr7 121028516 121028726 + 7.66 0.000 intron (NM_001105533, intron 2 of 17) intron (NM_001105533, intron 2 of 17) 39230 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr7-5725 chr7 72472518 72472728 + 7.66 0.000 Intergenic AluSx1|SINE|Alu -25480 NM_001363460 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr22-1091 chr22 31132668 31132878 + 7.66 0.000 intron (NM_001002837, intron 9 of 12) MIRb|SINE|MIR 7735 NM_015715 50487 Hs.149623 NM_015715 ENSG00000100078 PLA2G3 GIII-SPLA2|SPLA2III|sPLA2-III phospholipase A2 group III protein-coding chr3-5243 chr3 101892268 101892478 + 7.66 0.000 Intergenic Intergenic 42859 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr9-3545 chr9 37144812 37145022 + 7.66 0.000 intron (NM_001289120, intron 2 of 8) intron (NM_001289120, intron 2 of 8) 24319 NM_001289121 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr9-5756 chr9 127312097 127312307 + 7.66 0.000 intron (NR_104591, intron 3 of 26) L2b|LINE|L2 47428 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr17-7521 chr17 17539380 17539590 + 7.66 0.000 intron (NM_148173, intron 2 of 6) L1ME1|LINE|L1 38011 NM_148173 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chrX-3987 chrX 14551000 14551210 + 7.66 0.000 intron (NM_001118886, intron 2 of 8) MIR|SINE|MIR 21569 NM_001118886 2742 Hs.2700 NM_002063 ENSG00000101958 GLRA2 GLR glycine receptor alpha 2 protein-coding chr3-5749 chr3 20739298 20739508 + 7.66 0.000 Intergenic Intergenic 396935 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr4-5635 chr4 6824037 6824247 + 7.66 0.000 intron (NM_014743, intron 2 of 9) intron (NM_014743, intron 2 of 9) 41410 NM_001100590 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr3-9219 chr3 37763708 37763918 + 7.66 0.000 intron (NR_110531, intron 3 of 3) intron (NR_110531, intron 3 of 3) 97967 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr17-3913 chr17 56624354 56624564 + 7.66 0.000 Intergenic Intergenic 30760 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr8-6149 chr8 31009056 31009266 + 7.66 0.000 intron (NM_001323312, intron 2 of 2) AluSz|SINE|Alu 23640 NM_013357 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr1-8395 chr1 78722847 78723057 + 7.66 0.000 Intergenic Intergenic 73121 NM_006417 10561 Hs.82316 NM_006417 ENSG00000137965 IFI44 MTAP44|TLDC5|p44 interferon induced protein 44 protein-coding chr12-6169 chr12 13093369 13093579 + 7.66 0.000 intron (NM_001080555, intron 1 of 6) intron (NM_001080555, intron 1 of 6) 2201 NM_153823 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr6-2758 chr6 120386547 120386757 + 7.66 0.000 Intergenic Intergenic 371473 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr20-2398 chr20 19092690 19092900 + 7.66 0.000 Intergenic Intergenic -119847 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr3-10533 chr3 139413973 139414183 + 7.66 0.000 intron (NR_121609, intron 1 of 4) L1PB2|LINE|L1 24275 NR_121609 100507291 Hs.97661 NR_121608 ENSG00000248932 LOC100507291 - uncharacterized LOC100507291 ncRNA chr17-7210 chr17 82764253 82764463 + 7.66 0.000 intron (NM_005993, intron 3 of 38) intron (NM_005993, intron 3 of 38) 12293 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr2-13497 chr2 149297137 149297347 + 7.66 0.000 Intergenic Intergenic -32743 NM_001195685 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr10-5530 chr10 85207736 85207946 + 7.66 0.000 Intergenic L2a|LINE|L2 -8903 NR_120667 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr20-3643 chr20 9375960 9376170 + 7.66 0.000 intron (NM_000933, intron 9 of 35) intron (NM_000933, intron 9 of 35) 68265 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr2-5981 chr2 61888723 61888933 + 7.66 0.000 promoter-TSS (NM_006430) promoter-TSS (NM_006430) 105 NM_001321781 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr6-5330 chr6 144936009 144936219 + 7.66 0.000 Intergenic LTR78|LTR|ERV1 530459 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr10-7010 chr10 75347328 75347538 + 7.66 0.000 intron (NR_038226, intron 2 of 3) intron (NR_038226, intron 2 of 3) 51050 NR_038224 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA chr4-4506 chr4 61250233 61250443 + 7.66 0.000 intron (NM_001371342, intron 1 of 20) L3|LINE|CR1 48166 NM_001371342 chr2-6126 chr2 219483786 219483996 + 7.66 0.000 exon (NM_005876, exon 30 of 41) exon (NM_005876, exon 30 of 41) -12464 NM_001286811 100996693 Hs.21639 NM_001286811 ENSG00000286095 SPEGNB - SPEG neighbor protein-coding chr14-2969 chr14 50552914 50553124 + 7.66 0.000 intron (NM_001127713, intron 1 of 13) AluSz|SINE|Alu -7006 NM_015915 51062 Hs.584905 NM_015915 ENSG00000198513 ATL1 AD-FSP|FSP1|GBP3|HSN1D|SPG3|SPG3A|atlastin1 atlastin GTPase 1 protein-coding chr19-6116 chr19 3808679 3808889 + 7.66 0.000 intron (NM_015174, intron 17 of 18) intron (NM_015174, intron 17 of 18) -6985 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr5-4159 chr5 95817571 95817781 + 7.66 0.000 intron (NM_001243659, intron 1 of 2) intron (NM_001243659, intron 1 of 2) 5050 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr2-6507 chr2 187556799 187557009 + 7.66 0.000 Intergenic SVA_D|Retroposon|SVA -2399 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr8-5924 chr8 18404443 18404653 + 7.66 0.000 Intergenic L1PA13|LINE|L1 13266 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr21-911 chr21 28761821 28762031 + 7.66 0.000 Intergenic Intergenic 123441 NM_013240 29104 Hs.163846 NM_013240 ENSG00000156239 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P N-6 adenine-specific DNA methyltransferase 1 protein-coding chr14-2861 chr14 31269410 31269620 + 7.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -61722 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr1-8721 chr1 230342299 230342509 + 7.66 0.000 intron (NM_001258311, intron 3 of 6) intron (NM_001258311, intron 3 of 6) 83928 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr1-10557 chr1 172429496 172429706 + 7.66 0.000 intron (NM_139240, intron 1 of 6) intron (NM_139240, intron 1 of 6) 8916 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr2-7078 chr2 170221546 170221756 + 7.66 0.000 intron (NM_001083615, intron 6 of 33) intron (NM_001083615, intron 6 of 33) 43504 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr10-6795 chr10 8287284 8287494 + 7.66 0.000 Intergenic AluSx|SINE|Alu -19084 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chr2-4365 chr2 18077688 18077898 + 7.66 0.000 Intergenic MIR3|SINE|MIR 199126 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr11-7969 chr11 8417401 8417611 + 7.66 0.000 intron (NM_001352388, intron 13 of 14) L2a|LINE|L2 -148719 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chrX-2838 chrX 138032256 138032466 + 7.66 0.000 Intergenic L1PA16|LINE|L1 466234 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr12-3855 chr12 106032673 106032883 + 7.66 0.000 Intergenic Intergenic 107255 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr12-7451 chr12 62918035 62918245 + 7.66 0.000 intron (NM_020700, intron 1 of 9) MIRb|SINE|MIR 17010 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr7-3760 chr7 77570451 77570661 + 7.66 0.000 intron (NM_001131009, intron 1 of 16) intron (NM_001131009, intron 1 of 16) 32513 NM_001131009 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chr18-1531 chr18 10927570 10927780 + 7.66 0.000 intron (NM_022068, intron 3 of 51) intron (NM_022068, intron 3 of 51) -168026 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr19-3993 chr19 1920538 1920748 + 7.66 0.000 intron (NM_079834, intron 5 of 6) intron (NM_079834, intron 5 of 6) 15244 NM_001329540 113178 Hs.144980 NM_079834 ENSG00000227500 SCAMP4 SCAMP-4 secretory carrier membrane protein 4 protein-coding chr22-3033 chr22 30379867 30380077 + 7.66 0.000 intron (NM_001017981, intron 7 of 8) intron (NM_001017981, intron 7 of 8) -2067 NR_046312 85371 Hs.505597 NR_046312 KIAA1656 - KIAA1656 protein ncRNA chr8-5291 chr8 142383867 142384077 + 7.66 0.000 intron (NM_001366903, intron 1 of 9) L1M7|LINE|L1 19210 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr9-3788 chr9 127159473 127159683 + 7.66 0.000 intron (NM_001190729, intron 8 of 17) intron (NM_001190729, intron 8 of 17) -36943 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr9-7431 chr9 23924473 23924683 + 7.66 0.000 Intergenic HERV9-int|LTR|ERV1 -73977 NM_001351460 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding chr10-5559 chr10 88531627 88531837 + 7.66 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 51586 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr7-6619 chr7 107127493 107127703 + 7.66 0.000 intron (NM_002736, intron 3 of 10) intron (NM_002736, intron 3 of 10) -41363 NM_001244262 26959 Hs.162032 NM_012257 ENSG00000105856 HBP1 - HMG-box transcription factor 1 protein-coding chr6-6501 chr6 119024037 119024247 + 7.66 0.000 exon (NM_001100411, exon 2 of 17) exon (NM_001100411, exon 2 of 17) 45001 NR_030315 693128 NR_030315 ENSG00000207982 MIR548B MIRN548B microRNA 548b ncRNA chr6-6131 chr6 161133227 161133437 + 7.66 0.000 3' UTR (NM_020133, exon 9 of 9) 3' UTR (NM_020133, exon 9 of 9) 28650 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr7-4451 chr7 129859246 129859456 + 7.66 0.000 intron (NM_001202498, intron 3 of 6) intron (NM_001202498, intron 3 of 6) -84337 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chrX-3992 chrX 15277810 15278020 + 7.66 0.000 Intergenic LTR31|LTR|ERV1 -7448 NM_001168531 140462 Hs.19404 NM_024087 ENSG00000102048 ASB9 - ankyrin repeat and SOCS box containing 9 protein-coding chr5-1863 chr5 139561875 139562085 + 7.66 0.000 intron (NM_003339, intron 1 of 6) CpG 641 NM_003339 7322 Hs.108332 NM_003339 ENSG00000131508 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin conjugating enzyme E2 D2 protein-coding chr8-1990 chr8 85836583 85836793 + 7.66 0.000 Intergenic Intergenic -8746 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REXO1 like 2, pseudogene pseudo chr3-6072 chr3 51823289 51823499 + 7.66 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -3489 NM_001085479 401067 Hs.729443 NM_001085479 ENSG00000229972 IQCF3 - IQ motif containing F3 protein-coding chrX-4417 chrX 53547984 53548194 + 7.66 0.000 exon (NM_031407, exon 68 of 84) exon (NM_031407, exon 68 of 84) 8252 NR_029513 407054 NR_029513 ENSG00000271886 MIR98 MIRLET7L|MIRN98|hsa-mir-98|miR-98 microRNA 98 ncRNA chr7-8035 chr7 19997395 19997605 + 7.66 0.000 intron (NR_110114, intron 3 of 5) intron (NR_110114, intron 3 of 5) 142926 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr10-8740 chr10 103602068 103602278 + 7.66 0.000 exon (NM_014631, exon 14 of 14) exon (NM_014631, exon 14 of 14) 76042 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr20-3907 chr20 32266615 32266825 + 7.66 0.000 Intergenic L1MB3|LINE|L1 -10931 NM_004798 9371 Hs.369670 NM_004798 ENSG00000101350 KIF3B FLA8|HH0048|KLP-11 kinesin family member 3B protein-coding chr4-4470 chr4 55439079 55439289 + 7.66 0.000 intron (NM_004898, intron 21 of 22) L1MB3|LINE|L1 43227 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr13-2084 chr13 70844693 70844903 + 7.66 0.000 Intergenic MER52A|LTR|ERV1 -170343 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr11-9516 chr11 63863007 63863217 + 7.66 0.000 intron (NM_001163296, intron 1 of 16) intron (NM_001163296, intron 1 of 16) 24002 NM_001163296 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr6-3653 chr6 138582678 138582888 + 7.66 0.000 Intergenic Intergenic -10214 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr3-10992 chr3 179115468 179115678 + 7.66 0.000 intron (NR_125401, intron 2 of 2) MER5A|DNA|hAT-Charlie 32400 NR_125401 101928739 Hs.434553 NR_125401 ENSG00000229102 LOC101928739 - uncharacterized LOC101928739 ncRNA chr19-2917 chr19 1889999 1890209 + 7.66 0.000 Intergenic L2a|LINE|L2 -4608 NM_001130111 81926 Hs.465542 NM_031213 ENSG00000129968 ABHD17A C19orf27|FAM108A1 abhydrolase domain containing 17A protein-coding chrX-3498 chrX 40166811 40167021 + 7.66 0.000 intron (NM_001123384, intron 1 of 13) intron (NM_001123384, intron 1 of 13) 10361 NM_001123384 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr4-4723 chr4 89923160 89923370 + 7.66 0.000 exon (NM_007351, exon 4 of 8) exon (NM_007351, exon 4 of 8) 28411 NM_007351 22915 Hs.268107 NM_007351 ENSG00000138722 MMRN1 ECM|EMILIN4|GPIa*|MMRN multimerin 1 protein-coding chr2-11750 chr2 11452979 11453189 + 7.66 0.000 intron (NM_001278276, intron 4 of 7) intron (NM_001278276, intron 4 of 7) 13077 NM_001278276 1876 Hs.603093 NM_198256 ENSG00000169016 E2F6 E2F-6 E2F transcription factor 6 protein-coding chr6-1942 chr6 107977417 107977627 + 7.66 0.000 Intergenic AluJr|SINE|Alu -19314 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr9-8135 chr9 101530098 101530308 + 7.66 0.000 Intergenic Intergenic -3650 NM_019592 56254 Hs.729085 NM_019592 ENSG00000155827 RNF20 BRE1|BRE1A|hBRE1 ring finger protein 20 protein-coding chr7-7988 chr7 15678397 15678607 + 7.66 0.000 intron (NR_134258, intron 3 of 3) intron (NR_134258, intron 3 of 3) 8181 NM_005924 4223 Hs.170355 NM_005924 ENSG00000106511 MEOX2 GAX|MOX2 mesenchyme homeobox 2 protein-coding chr6-5751 chr6 156942827 156943037 + 7.66 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -93495 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr22-3558 chr22 17633296 17633506 + 7.66 0.000 Intergenic Intergenic -4579 NM_001039366 529 Hs.517338 NM_001696 ENSG00000131100 ATP6V1E1 ARCL2C|ATP6E|ATP6E2|ATP6V1E|P31|Vma4 ATPase H+ transporting V1 subunit E1 protein-coding chr2-8399 chr2 114680632 114680842 + 7.66 0.000 intron (NM_001321908, intron 2 of 25) intron (NM_001321908, intron 2 of 25) 152811 NR_132105 101927591 Hs.553019 NR_132105 ENSG00000231538 DPP10-AS3 - DPP10 antisense RNA 3 ncRNA chr1-15908 chr1 184805740 184805950 + 7.66 0.000 intron (NM_052966, intron 11 of 13) intron (NM_052966, intron 11 of 13) -50987 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr1-4833 chr1 25121762 25121972 + 7.66 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 98364 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr12-4667 chr12 47290529 47290739 + 7.66 0.000 Intergenic Intergenic 16765 NR_135024 105369747 Hs.88617 NR_135024 LOC105369747 - uncharacterized LOC105369747 ncRNA chr12-3241 chr12 58425651 58425861 + 7.66 0.000 Intergenic Intergenic -165946 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr1-8687 chr1 217089703 217089913 + 7.66 0.000 promoter-TSS (NM_001243505) promoter-TSS (NM_001243505) 16 NM_001243505 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr1-7051 chr1 179529198 179529408 + 7.66 0.000 intron (NR_073544, intron 23 of 25) Charlie4z|DNA|hAT-Charlie 46645 NM_001297575 7827 Hs.412710 NM_014625 ENSG00000116218 NPHS2 PDCN|SRN1 NPHS2 stomatin family member, podocin protein-coding chr7-8613 chr7 67913860 67914070 + 7.66 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -106288 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chrX-3836 chrX 151947740 151947950 + 7.66 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 10813 NR_029638 407009 NR_029638 ENSG00000284363 MIR224 MIRN224|miRNA224 microRNA 224 ncRNA chr12-5774 chr12 5281366 5281576 + 7.66 0.000 Intergenic L1PA5|LINE|L1 -38320 NR_120477 101929584 Hs.436529 NR_120476 ENSG00000256115 LINC02443 - long intergenic non-protein coding RNA 2443 ncRNA chr10-3097 chr10 20127950 20128160 + 7.66 0.000 intron (NM_032812, intron 4 of 13) intron (NM_032812, intron 4 of 13) 311623 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr20-4398 chr20 58433839 58434049 + 7.66 0.000 intron (NM_001195677, intron 2 of 2) intron (NM_001195677, intron 2 of 2) 44715 NM_001195677 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr11-5407 chr11 67709931 67710141 + 7.66 0.000 Intergenic Intergenic -28812 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr19-3082 chr19 4554155 4554365 + 7.66 0.000 intron (NM_032108, intron 9 of 16) intron (NM_032108, intron 9 of 16) 5424 NM_032108 10501 Hs.465642 NM_020241 ENSG00000167680 SEMA6B SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ semaphorin 6B protein-coding chr1-15271 chr1 114796734 114796944 + 7.66 0.000 Intergenic Intergenic -16154 NR_049742 80143 Hs.709277 NM_025073 ENSG00000052723 SIKE1 SIKE suppressor of IKBKE 1 protein-coding chr11-5802 chr11 6211094 6211304 + 7.66 0.000 TTS (NM_173525) TTS (NM_173525) 5642 NM_173525 160298 Hs.278221 NM_173525 ENSG00000180878 C11orf42 - chromosome 11 open reading frame 42 protein-coding chr22-1506 chr22 41337620 41337830 + 7.66 0.000 intron (NM_017590, intron 7 of 22) intron (NM_017590, intron 7 of 22) -29608 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr18-2674 chr18 54284783 54284993 + 7.66 0.000 intron (NM_001351620, intron 6 of 8) intron (NM_001351620, intron 6 of 8) 15314 NM_001351611 11201 Hs.438533 NM_007195 ENSG00000101751 POLI RAD30B|RAD3OB|eta2 DNA polymerase iota protein-coding chr5-6417 chr5 151858619 151858829 + 7.66 0.000 intron (NM_000171, intron 4 of 8) intron (NM_000171, intron 4 of 8) 66127 NM_000171 2741 Hs.121490 NM_000171 ENSG00000145888 GLRA1 HKPX1|STHE glycine receptor alpha 1 protein-coding chr16-4525 chr16 62038892 62039102 + 7.66 0.000 Intergenic Intergenic -2559 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr4-7466 chr4 70452988 70453198 + 7.66 0.000 intron (NM_001145006, intron 1 of 3) L1M1|LINE|L1 -18865 NM_001145007 4589 Hs.631946 NM_152291 ENSG00000171195 MUC7 MG2 mucin 7, secreted protein-coding chr1-9266 chr1 25066198 25066408 + 7.66 0.000 Intergenic Intergenic 42800 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr10-5830 chr10 112006759 112006969 + 7.66 0.000 Intergenic LTR33|LTR|ERVL 176901 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr11-10360 chr11 111335749 111335959 + 7.66 0.000 Intergenic Intergenic -11903 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chr3-7273 chr3 197134838 197135048 + 7.66 0.000 intron (NM_001366216, intron 9 of 23) LTR16D|LTR|ERVL 48929 NR_158767 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr22-2042 chr22 42406730 42406940 + 7.66 0.000 intron (NM_001318323, intron 2 of 4) AluSc8|SINE|Alu 25524 NM_001318323 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr3-7151 chr3 185813806 185814016 + 7.66 0.000 intron (NR_138486, intron 2 of 15) GA-rich|Low_complexity|Low_complexity 7220 NM_001291873 10644 Hs.35354 NM_006548 ENSG00000073792 IGF2BP2 IMP-2|IMP2|VICKZ2 insulin like growth factor 2 mRNA binding protein 2 protein-coding chr1-8091 chr1 6103272 6103482 + 7.66 0.000 3' UTR (NM_015557, exon 42 of 42) 3' UTR (NM_015557, exon 42 of 42) 57489 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr18-1594 chr18 39907809 39908019 + 7.66 0.000 Intergenic Intergenic 66205 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr5-6820 chr5 104294078 104294288 + 7.66 0.000 Intergenic AluSx|SINE|Alu -731394 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr16-2656 chr16 50622995 50623205 + 7.66 0.000 intron (NM_033119, intron 5 of 9) L2b|LINE|L2 -45755 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr5-3582 chr5 80535940 80536150 + 7.66 0.000 intron (NM_205548, intron 5 of 5) L1MA2|LINE|L1 34235 NM_001004441 340120 Hs.519404 NM_001004441 ENSG00000189127 ANKRD34B DP58 ankyrin repeat domain 34B protein-coding chr6-2654 chr6 1381784 1381994 + 7.66 0.000 Intergenic CpG -7687 NM_001452 2295 Hs.484423 NM_001452 ENSG00000137273 FOXF2 FKHL6|FREAC-2|FREAC2 forkhead box F2 protein-coding chr1-8770 chr1 1150322 1150532 + 7.66 0.000 Intergenic Intergenic 13410 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA chr21-619 chr21 38578355 38578565 + 7.66 0.000 intron (NM_001243432, intron 2 of 11) MLT1H|LTR|ERVL-MaLR 6485 NM_001243429 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr10-9087 chr10 125516897 125517107 + 7.66 0.000 Intergenic Intergenic -57369 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chrX-658 chrX 118225472 118225682 + 7.66 0.000 Intergenic Intergenic -108237 NM_001168301 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr1-8236 chr1 29640029 29640239 + 7.66 0.000 Intergenic Intergenic -290020 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr3-5253 chr3 108178753 108178963 + 7.66 0.000 intron (NM_018010, intron 6 of 10) L1M5|LINE|L1 43566 NM_018010 55081 Hs.412196 NM_018010 ENSG00000114446 IFT57 ESRRBL1|HIPPI|MHS4R2|OFD18 intraflagellar transport 57 protein-coding chr2-11297 chr2 189632418 189632628 + 7.66 0.000 Intergenic AluSz|SINE|Alu -28876 NM_001353493 110599588 Hs.101364 NM_001353493 ENSG00000286053 ASDURF ASNSD1|ASNSD1-SEP|NS3TP1 ASNSD1 upstream reading frame protein-coding chr2-11134 chr2 137854123 137854333 + 7.66 0.000 Intergenic Intergenic 73704 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr9-4070 chr9 122551854 122552064 + 7.66 0.000 Intergenic Intergenic -1153 NM_001004457 138882 Hs.632682 NM_001004457 ENSG00000171501 OR1N2 OR9-23 olfactory receptor family 1 subfamily N member 2 protein-coding chr5-5703 chr5 165735226 165735436 + 7.66 0.000 Intergenic AluJo|SINE|Alu 1191039 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr12-4507 chr12 22979017 22979227 + 7.66 0.000 Intergenic Intergenic -196514 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr8-3541 chr8 121976859 121977069 + 7.66 0.000 Intergenic Intergenic -335524 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr11-10656 chr11 127140048 127140258 + 7.66 0.000 Intergenic Intergenic 73151 NR_120578 101929473 Hs.737523 NR_120578 ENSG00000255087 LOC101929473 - uncharacterized LOC101929473 ncRNA chr7-9589 chr7 147697914 147698124 + 7.66 0.000 intron (NM_014141, intron 12 of 22) L1MC1|LINE|L1 26340 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr6-5856 chr6 36136285 36136495 + 7.66 0.000 intron (NR_072996, intron 5 of 9) MIR3|SINE|MIR 5877 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr15-5304 chr15 101576311 101576521 + 7.66 0.000 Intergenic L1MC1|LINE|L1 37923 NR_147041 101927505 Hs.578394 NR_147041 LINC02348 - long intergenic non-protein coding RNA 2348 ncRNA chr20-1225 chr20 28513563 28513773 + 7.66 0.000 Intergenic ALR/Alpha|Satellite|centr 88997 NR_132315 100289097 Hs.529357 NR_132315 ENSG00000282826 FRG1CP - FSHD region gene 1 family member C, pseudogene pseudo chr17-7241 chr17 1901659 1901869 + 7.66 0.000 Intergenic AluSz|SINE|Alu 71759 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr16-4995 chr16 20200655 20200865 + 7.66 0.000 Intergenic Kanga1|DNA|TcMar-Tc2 126753 NM_001502 2813 Hs.53985 NM_001502 ENSG00000169347 GP2 ZAP75 glycoprotein 2 protein-coding chr3-3211 chr3 195112612 195112822 + 7.66 0.000 intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) 18129 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr12-5493 chr12 125784721 125784931 + 7.66 0.000 Intergenic Intergenic 162374 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr8-5766 chr8 141932936 141933146 + 7.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -146728 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr3-7307 chr3 17131892 17132102 + 7.66 0.000 Intergenic Intergenic 198801 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr16-6304 chr16 47550150 47550360 + 7.66 0.000 intron (NM_001031835, intron 8 of 31) intron (NM_001031835, intron 8 of 31) 88924 NM_001031835 5257 Hs.78060 NM_000293 ENSG00000102893 PHKB - phosphorylase kinase regulatory subunit beta protein-coding chr2-11665 chr2 7263580 7263790 + 7.66 0.000 Intergenic Intergenic -157576 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr19-3219 chr19 55552754 55552964 + 7.66 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger -7316 NM_001199824 100130827 Hs.712129 NM_001199824 ENSG00000231274 SBK3 SGK110 SH3 domain binding kinase family member 3 protein-coding chr9-8016 chr9 94640887 94641097 + 7.66 0.000 promoter-TSS (NM_001127628) promoter-TSS (NM_001127628) -743 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr14-3048 chr14 59576619 59576829 + 7.66 0.000 promoter-TSS (NM_001164399) promoter-TSS (NM_001164399) 88 NM_001164399 729665 NM_001164399 ENSG00000151838 CCDC175 C14orf38|c14_5395 coiled-coil domain containing 175 protein-coding chr16-5680 chr16 71988046 71988256 + 7.66 0.000 intron (NM_181536, intron 4 of 29) L2a|LINE|L2 11827 NM_181536 342372 Hs.675286 NM_181536 ENSG00000277481 PKD1L3 - polycystin 1 like 3, transient receptor potential channel interacting protein-coding chr17-8078 chr17 54349244 54349454 + 7.66 0.000 Intergenic Intergenic 526422 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chrX-4740 chrX 92780141 92780351 + 7.66 0.000 Intergenic Intergenic 44657 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr1-13074 chr1 179233660 179233870 + 7.66 0.000 Intergenic AluY|SINE|Alu -4081 NM_001136001 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr22-1525 chr22 20000238 20000448 + 7.66 0.000 intron (NM_001670, intron 2 of 19) intron (NM_001670, intron 2 of 19) 16480 NM_001670 421 Hs.713616 NM_001670 ENSG00000099889 ARVCF - ARVCF delta catenin family member protein-coding chr2-11301 chr2 190571783 190571993 + 7.66 0.000 Intergenic Intergenic -37166 NM_001142645 100131211 Hs.659824 NM_001142645 ENSG00000189362 NEMP2 TMEM194B nuclear envelope integral membrane protein 2 protein-coding chr7-6515 chr7 29327070 29327280 + 7.66 0.000 intron (NM_001293070, intron 2 of 13) intron (NM_001293070, intron 2 of 13) -118205 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr11-5322 chr11 57410553 57410763 + 7.66 0.000 intron (NM_017611, intron 11 of 13) L1MC5a|LINE|L1 16463 NM_199329 29015 Hs.99962 NM_014096 ENSG00000134802 SLC43A3 EEG1|ENBT1|FOAP-13|PRO1659|SEEEG-1 solute carrier family 43 member 3 protein-coding chr4-7161 chr4 39397206 39397416 + 7.66 0.000 Intergenic L1MB3|LINE|L1 -9619 NM_175737 152831 Hs.90756 NM_175737 ENSG00000134962 KLB BKL klotho beta protein-coding chr3-4607 chr3 197580605 197580815 + 7.66 0.000 Intergenic L1ME4b|LINE|L1 -7387 NM_203315 622 Hs.274539 NM_004051 ENSG00000161267 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase 1 protein-coding chr1-7237 chr1 225607628 225607838 + 7.66 0.000 intron (NM_001008493, intron 1 of 14) HAL1|LINE|L1 45390 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr5-5168 chr5 109938714 109938924 + 7.66 0.000 Intergenic Intergenic 55637 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr11-2802 chr11 107591843 107592053 + 7.66 0.000 intron (NM_001308018, intron 1 of 12) intron (NM_001308018, intron 1 of 12) 801 NM_018712 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr19-4266 chr19 58532420 58532630 + 7.66 0.000 intron (NM_001316980, intron 1 of 2) intron (NM_001316980, intron 1 of 2) 6386 NM_001316982 84878 Hs.515662 NM_032792 ENSG00000119574 ZBTB45 ZNF499 zinc finger and BTB domain containing 45 protein-coding chr12-5909 chr12 64029317 64029527 + 7.66 0.000 intron (NM_001346201, intron 4 of 21) intron (NM_001346201, intron 4 of 21) 184722 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr15-3166 chr15 68421457 68421667 + 7.66 0.000 intron (NM_001004439, intron 1 of 29) L2a|LINE|L2 10601 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr16-7039 chr16 88351343 88351553 + 7.66 0.000 Intergenic Intergenic -76023 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chrX-5361 chrX 149834740 149834950 + 7.66 0.000 intron (NR_109813, intron 1 of 2) Harlequin-int|LTR|ERV1 9137 NR_109813 101241891 Hs.744829 NR_109813 ENSG00000280752 LINC00850 KUCG1 long intergenic non-protein coding RNA 850 ncRNA chr2-11174 chr2 150601772 150601982 + 7.66 0.000 Intergenic L5|LINE|RTE-X -27020 NR_110245 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr17-4082 chr17 79631263 79631473 + 7.66 0.000 Intergenic Intergenic -20317 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chrX-2398 chrX 72505901 72506111 + 7.66 0.000 intron (NM_001166448, intron 2 of 4) MER92-int|LTR|ERV1 66837 NM_018486 55869 Hs.310536 NM_018486 ENSG00000147099 HDAC8 CDA07|CDLS5|HD8|HDACL1|KDAC8|MRXS6|RPD3|WTS histone deacetylase 8 protein-coding chr17-5771 chr17 61805371 61805581 + 7.66 0.000 intron (NM_032043, intron 7 of 19) intron (NM_032043, intron 7 of 19) 58083 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding chr14-4766 chr14 62952299 62952509 + 7.66 0.000 intron (NM_139318, intron 6 of 10) intron (NM_139318, intron 6 of 10) 93054 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chrX-4615 chrX 75336547 75336757 + 7.66 0.000 Intergenic L1PB3|LINE|L1 62567 NM_145052 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chr14-3028 chr14 56342583 56342793 + 7.66 0.000 Intergenic Intergenic -171643 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr4-6043 chr4 3158153 3158363 + 7.66 0.000 intron (NM_002111, intron 28 of 66) AluJr|SINE|Alu 83577 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr12-7294 chr12 53241866 53242076 + 7.66 0.000 Intergenic Intergenic -9615 NM_001170790 84975 Hs.654660 NM_032889 ENSG00000182544 MFSD5 hsMOT2 major facilitator superfamily domain containing 5 protein-coding chr5-3572 chr5 68862038 68862248 + 7.66 0.000 Intergenic Intergenic 167784 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr2-10966 chr2 88125551 88125761 + 7.66 0.000 intron (NM_001443, intron 2 of 3) intron (NM_001443, intron 2 of 3) 2406 NM_001443 2168 Hs.380135 NM_001443 ENSG00000163586 FABP1 FABPL|L-FABP fatty acid binding protein 1 protein-coding chr10-6133 chr10 133160458 133160668 + 7.66 0.000 exon (NM_152643, exon 1 of 30) exon (NM_152643, exon 1 of 30) 344 NM_152643 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr2-12096 chr2 33728736 33728946 + 7.66 0.000 promoter-TSS (NR_003143) promoter-TSS (NR_003143) -624 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr1-14678 chr1 61163682 61163892 + 7.66 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 81226 NM_005595 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr11-8303 chr11 74014595 74014805 + 7.66 0.000 intron (NM_001286577, intron 32 of 32) intron (NM_001286577, intron 32 of 32) -5463 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr1-11769 chr1 22045191 22045401 + 7.66 0.000 Intergenic L2c|LINE|L2 -7413 NM_001791 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr11-7399 chr11 85939316 85939526 + 7.66 0.000 Intergenic L1ME3|LINE|L1 84320 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr1-4169 chr1 25030903 25031113 + 7.66 0.000 Intergenic Intergenic 7505 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr6-2680 chr6 16712420 16712630 + 7.66 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 47659 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr10-6910 chr10 47075632 47075842 + 7.66 0.000 Intergenic Intergenic 164015 NM_001352533 26095 Hs.440733 NM_015605 ENSG00000204179 PTPN20 CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 protein tyrosine phosphatase non-receptor type 20 protein-coding chr1-6798 chr1 87815223 87815433 + 7.66 0.000 Intergenic Intergenic -443673 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr18-3530 chr18 75865398 75865608 + 7.66 0.000 Intergenic Intergenic -153100 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chr1-6435 chr1 16173442 16173652 + 7.66 0.000 Intergenic Intergenic -17478 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr2-12679 chr2 75525836 75526046 + 7.66 0.000 intron (NR_110281, intron 1 of 2) intron (NR_110281, intron 1 of 2) 1873 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr9-8254 chr9 111366766 111366976 + 7.66 0.000 intron (NM_001363756, intron 45 of 48) intron (NM_001363756, intron 45 of 48) -36647 NM_205859 26248 Hs.381312 NM_205859 ENSG00000171133 OR2K2 HSHTPCRH06|HTPCRH06|OR2AN1P|OR2AR1P olfactory receptor family 2 subfamily K member 2 protein-coding chr12-5562 chr12 7542831 7543041 + 7.66 0.000 Intergenic Intergenic -39118 NM_203416 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding chr6-8474 chr6 156319179 156319389 + 7.66 0.000 Intergenic L1MC1|LINE|L1 -59466 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr10-4580 chr10 109886019 109886229 + 7.66 0.000 intron (NM_020383, intron 8 of 20) intron (NM_020383, intron 8 of 20) 37122 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr10-8838 chr10 110368061 110368271 + 7.66 0.000 Intergenic Intergenic -63246 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr9-6335 chr9 4834405 4834615 + 7.66 0.000 intron (NM_005772, intron 5 of 8) intron (NM_005772, intron 5 of 8) -5259 NM_001286701 10171 Hs.194121 NM_005772 ENSG00000120158 RCL1 RNAC|RPCL1 RNA terminal phosphate cyclase like 1 protein-coding chr2-10606 chr2 5113149 5113359 + 7.66 0.000 Intergenic MSTA|LTR|ERVL-MaLR -457032 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr13-4022 chr13 72124298 72124508 + 7.66 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -257199 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr1-14338 chr1 40338702 40338912 + 7.66 0.000 Intergenic Intergenic -21521 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr13-2679 chr13 86439562 86439772 + 7.66 0.000 Intergenic MER39B|LTR|ERV1 -472253 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr9-7285 chr9 7869464 7869674 + 7.66 0.000 Intergenic L1MEi|LINE|L1 -69791 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr6-5807 chr6 14416376 14416586 + 7.66 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -131027 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr3-4070 chr3 95742976 95743186 + 7.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -59888 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr11-7334 chr11 64907675 64907885 + 7.66 0.000 exon (NM_001367971, exon 17 of 41) exon (NM_001367971, exon 17 of 41) -5325 NR_106807 102466727 NR_106807 ENSG00000274314 MIR6749 hsa-mir-6749 microRNA 6749 ncRNA chr14-1596 chr14 95313933 95314143 + 7.66 0.000 intron (NM_024734, intron 1 of 12) intron (NM_024734, intron 1 of 12) 5870 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr9-6155 chr9 69385834 69386044 + 7.66 0.000 exon (NM_001347995, exon 9 of 11) exon (NM_001347995, exon 9 of 11) 56614 NM_004816 9413 Hs.118003 NM_004816 ENSG00000135063 FAM189A2 C9orf61|X123 family with sequence similarity 189 member A2 protein-coding chr2-3266 chr2 10382449 10382659 + 7.66 0.000 intron (NM_001258359, intron 1 of 4) L1MC1|LINE|L1 13790 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr12-4854 chr12 59165191 59165401 + 7.66 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -244758 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr12-3563 chr12 11386801 11387011 + 7.66 0.000 intron (NM_001367912, intron 4 of 7) intron (NM_001367912, intron 4 of 7) 8660 NM_001367912 5542 Hs.631726 NM_005039 ENSG00000251655 PRB1 PM|PMF|PMS|PRB1L|PRB1M proline rich protein BstNI subfamily 1 (gene/pseudogene) protein-coding chr2-4593 chr2 109031356 109031566 + 7.66 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -42241 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr6-3838 chr6 40227466 40227676 + 7.66 0.000 Intergenic MSTB1-int|LTR|ERVL-MaLR 128435 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr6-6817 chr6 6875996 6876206 + 7.66 0.000 Intergenic L3b|LINE|CR1 -231642 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr5-4342 chr5 163637821 163638031 + 7.66 0.000 Intergenic Intergenic 132307 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr9-6872 chr9 84084037 84084247 + 7.66 0.000 non-coding (NR_110995, exon 7 of 9) non-coding (NR_110995, exon 7 of 9) 20699 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chrX-3668 chrX 103681721 103681931 + 7.66 0.000 intron (NM_001142419, intron 2 of 3) intron (NM_001142419, intron 2 of 3) 4873 NM_012286 9643 Hs.326387 NM_012286 ENSG00000123562 MORF4L2 MORFL2|MRGX mortality factor 4 like 2 protein-coding chr8-5908 chr8 17498060 17498270 + 7.66 0.000 intron (NM_001008539, intron 1 of 11) intron (NM_001008539, intron 1 of 11) 1077 NM_001008539 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr4-4086 chr4 4385641 4385851 + 7.66 0.000 promoter-TSS (NM_001040101) promoter-TSS (NM_001040101) -510 NM_001287763 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr11-6516 chr11 68968603 68968813 + 7.66 0.000 Intergenic Intergenic 12278 NM_198923 116512 Hs.527802 NM_198923 ENSG00000172938 MRGPRD MRGD|TGR7 MAS related GPR family member D protein-coding chr9-4441 chr9 18744028 18744238 + 7.66 0.000 intron (NM_001040272, intron 15 of 28) MIRc|SINE|MIR 170827 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr12-2693 chr12 104063583 104063793 + 7.66 0.000 promoter-TSS (NM_013320) promoter-TSS (NM_013320) 489 NM_001316967 83468 Hs.631650 NM_031302 ENSG00000120820 GLT8D2 - glycosyltransferase 8 domain containing 2 protein-coding chr8-5057 chr8 29005807 29006017 + 7.66 0.000 intron (NM_001324384, intron 4 of 10) L1ME3|LINE|L1 114598 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr3-6769 chr3 142183288 142183498 + 7.66 0.000 intron (NM_001039547, intron 9 of 15) AluJr|SINE|Alu -33849 NM_001178138 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr12-2110 chr12 55825058 55825268 + 7.66 0.000 intron (NM_032364, intron 2 of 6) intron (NM_032364, intron 2 of 6) -4445 NR_036478 440104 Hs.731828 NM_001013700 ENSG00000182796 TMEM198B - transmembrane protein 198B (pseudogene) pseudo chr10-3418 chr10 33272113 33272323 + 7.66 0.000 intron (NM_001244973, intron 2 of 16) intron (NM_001244973, intron 2 of 16) 62449 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr1-11639 chr1 245300443 245300653 + 7.66 0.000 intron (NM_018012, intron 2 of 14) AluSx|SINE|Alu -66031 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr13-2939 chr13 31373084 31373294 + 7.66 0.000 Intergenic Intergenic 173214 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr16-6359 chr16 50811856 50812066 + 7.66 0.000 Intergenic Intergenic 5289 NR_146573 105371252 NR_146573 ENSG00000261703 LINC02168 - long intergenic non-protein coding RNA 2168 ncRNA chr3-7780 chr3 75930207 75930417 + 7.66 0.000 Intergenic L2a|LINE|L2 -144763 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr10-5070 chr10 43465178 43465388 + 7.66 0.000 intron (NM_001355446, intron 2 of 4) SVA_D|Retroposon|SVA 28172 NM_001355444 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding chr11-6564 chr11 71283133 71283343 + 7.66 0.000 Intergenic L2c|LINE|L2 -58442 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr18-1149 chr18 11064188 11064398 + 7.66 0.000 intron (NM_022068, intron 2 of 51) intron (NM_022068, intron 2 of 51) 84469 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chrX-2999 chrX 48791931 48792141 + 7.66 0.000 exon (NM_002049, exon 3 of 6) exon (NM_002049, exon 3 of 6) 5462 NM_002049 2623 Hs.765 NM_002049 ENSG00000102145 GATA1 ERYF1|GATA-1|GF-1|GF1|NF-E1|NFE1|XLANP|XLTDA|XLTT GATA binding protein 1 protein-coding chr21-1662 chr21 26222441 26222651 + 7.66 0.000 Intergenic MER4A1|LTR|ERV1 -51418 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr9-3932 chr9 135686308 135686518 + 7.66 0.000 Intergenic Intergenic 13068 NM_001012415 402381 Hs.120464 NM_001012415 ENSG00000165643 SOHLH1 C9orf157|NOHLH|ODG5|SPATA27|SPGF32|TEB2|bA100C15.3|bHLHe80 spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein-coding chr11-8033 chr11 17433259 17433469 + 7.66 0.000 intron (NR_147094, intron 10 of 37) intron (NR_147094, intron 10 of 37) 43481 NR_147094 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr2-5090 chr2 11590582 11590792 + 7.66 0.000 intron (NM_014668, intron 10 of 32) L2a|LINE|L2 48001 NM_033090 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr14-3789 chr14 59922317 59922527 + 7.66 0.000 intron (NR_075071, intron 1 of 32) L2c|LINE|L2 2709 NM_001355272 341883 Hs.666245 NM_198499 ENSG00000131951 LRRC9 - leucine rich repeat containing 9 protein-coding chr10-6273 chr10 84704245 84704455 + 7.66 0.000 Intergenic Intergenic 279181 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr16-1766 chr16 89657176 89657386 + 7.66 0.000 promoter-TSS (NM_153025) promoter-TSS (NM_153025) 427 NR_046418 5119 Hs.589427 NM_002768 ENSG00000131165 CHMP1A CHMP1|PCH8|PCOLN3|PRSM1|VPS46-1|VPS46A charged multivesicular body protein 1A protein-coding chr11-9223 chr11 40114437 40114647 + 7.66 0.000 non-coding (NR_047673, exon 3 of 3) non-coding (NR_047673, exon 3 of 3) 178588 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr12-5087 chr12 94102234 94102444 + 7.66 0.000 Intergenic CpG -46238 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr10-4919 chr10 22823108 22823318 + 7.66 0.000 Intergenic MIRb|SINE|MIR -104811 NM_001282747 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding chr8-2624 chr8 63086006 63086216 + 7.66 0.000 promoter-TSS (NM_000370) promoter-TSS (NM_000370) -58 NM_000370 7274 Hs.69049 NM_000370 ENSG00000137561 TTPA ATTP|AVED|TTP1|alphaTTP alpha tocopherol transfer protein protein-coding chr13-3749 chr13 42523082 42523292 + 7.66 0.000 Intergenic Intergenic -39549 NM_033012 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr19-3851 chr19 17717400 17717610 + 7.66 0.000 Intergenic Intergenic -1975 NM_018174 55201 Hs.66048 NM_018174 ENSG00000130479 MAP1S BPY2IP1|C19orf5|MAP8|VCY2IP-1|VCY2IP1 microtubule associated protein 1S protein-coding chr11-7179 chr11 130196600 130196810 + 7.66 0.000 intron (NM_021978, intron 11 of 18) intron (NM_021978, intron 11 of 18) 36923 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr15-2505 chr15 34469252 34469462 + 7.66 0.000 Intergenic Intergenic -31549 NR_027409 23015 Hs.182982 NM_181077 ENSG00000175265 GOLGA8A GM88|GOLGA8B golgin A8 family member A protein-coding chr7-6850 chr7 47267297 47267507 + 7.66 0.000 Intergenic Intergenic 197401 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr17-4506 chr17 73489576 73489786 + 7.66 0.000 intron (NM_001144952, intron 2 of 44) intron (NM_001144952, intron 2 of 44) -24002 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr14-1762 chr14 84095858 84096068 + 7.66 0.000 Intergenic Intergenic -1175969 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr1-13071 chr1 178599623 178599833 + 7.66 0.000 Intergenic L1MCa|LINE|L1 56932 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 (putative) ncRNA chr2-6159 chr2 238150192 238150402 + 7.66 0.000 intron (NM_198582, intron 7 of 7) intron (NM_198582, intron 7 of 7) -8673 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr3-7716 chr3 49900983 49901193 + 7.66 0.000 intron (NR_134919, intron 1 of 19) intron (NR_134919, intron 1 of 19) 2549 NM_001318913 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chr11-10170 chr11 93832652 93832862 + 7.66 0.000 intron (NM_001144871, intron 1 of 3) MIR3|SINE|MIR 17861 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr6-7605 chr6 76542135 76542345 + 7.66 0.000 intron (NR_149101, intron 2 of 2) intron (NR_149101, intron 2 of 2) 51383 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr3-8525 chr3 139313029 139313239 + 7.66 0.000 Intergenic L2c|LINE|L2 -30860 NM_020191 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr10-4813 chr10 10766428 10766638 + 7.66 0.000 intron (NM_001326317, intron 2 of 14) ERVL-B4-int|LTR|ERVL 28381 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo chr1-5547 chr1 226548770 226548980 + 7.66 0.000 5' UTR (NM_001003665, exon 1 of 4) 5' UTR (NM_001003665, exon 1 of 4) 111 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr12-2246 chr12 68521184 68521394 + 7.66 0.000 Intergenic Intergenic -69805 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr1-11816 chr1 28887054 28887264 + 7.66 0.000 promoter-TSS (NM_203342) promoter-TSS (NM_203342) 59 NM_004437 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr6-7700 chr6 87014577 87014787 + 7.66 0.000 intron (NM_000865, intron 1 of 1) L1PA7|LINE|L1 77154 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr14-2332 chr14 102990465 102990675 + 7.66 0.000 intron (NM_006035, intron 5 of 36) L1MC4|LINE|L1 66979 NM_006035 9578 Hs.654634 NM_006035 ENSG00000198752 CDC42BPB MRCKB CDC42 binding protein kinase beta protein-coding chr17-8043 chr17 50661851 50662061 + 7.66 0.000 intron (NM_003786, intron 8 of 30) intron (NM_003786, intron 8 of 30) 27075 NM_001144070 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr4-5069 chr4 144425418 144425628 + 7.66 0.000 Intergenic L2c|LINE|L2 220496 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA chr11-9156 chr11 34726915 34727125 + 7.66 0.000 Intergenic Intergenic 94454 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr1-14659 chr1 59091948 59092158 + 7.66 0.000 Intergenic Intergenic 54754 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr10-8141 chr10 70545477 70545687 + 7.66 0.000 intron (NM_014431, intron 17 of 19) intron (NM_014431, intron 17 of 19) 57159 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr22-3951 chr22 37623677 37623887 + 7.66 0.000 intron (NM_001001560, intron 9 of 14) intron (NM_001001560, intron 9 of 14) 14742 NM_001172688 26088 Hs.499158 NM_013365 ENSG00000100083 GGA1 - golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding chr13-2710 chr13 93249574 93249784 + 7.66 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 22872 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr4-6179 chr4 41982133 41982343 + 7.66 0.000 exon (NM_001029955, exon 1 of 1) exon (NM_001029955, exon 1 of 1) 482 NM_001029955 285429 Hs.213307 NM_001029955 ENSG00000182308 DCAF4L1 WDR21B DDB1 and CUL4 associated factor 4 like 1 protein-coding chr5-6407 chr5 149578964 149579174 + 7.66 0.000 Intergenic Intergenic -2429 NM_001001669 389337 Hs.256206 NM_001001669 ENSG00000183111 ARHGEF37 - Rho guanine nucleotide exchange factor 37 protein-coding chr15-2521 chr15 40398139 40398349 + 7.66 0.000 Intergenic AluJb|SINE|Alu -7551 NM_001354598 3712 Hs.513646 NM_002225 ENSG00000128928 IVD ACAD2 isovaleryl-CoA dehydrogenase protein-coding chr9-7838 chr9 83449455 83449665 + 7.66 0.000 intron (NM_174938, intron 1 of 13) MIR3|SINE|MIR 18182 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr7-7400 chr7 71999342 71999552 + 7.66 0.000 intron (NM_001363460, intron 4 of 5) L1MDa|LINE|L1 337944 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr5-3436 chr5 154467892 154468102 + 7.66 0.000 Intergenic MIR3|SINE|MIR 10230 NM_004821 9421 Hs.152531 NM_004821 ENSG00000113196 HAND1 Hxt|Thing1|bHLHa27|eHand heart and neural crest derivatives expressed 1 protein-coding chr16-6581 chr16 66649591 66649801 + 7.66 0.000 intron (NM_181521, intron 1 of 3) intron (NM_181521, intron 1 of 3) 44965 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr10-4316 chr10 21375835 21376045 + 7.66 0.000 Intergenic Intergenic -2990 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr10-8508 chr10 90721129 90721339 + 7.66 0.000 Intergenic L1M5|LINE|L1 136805 NM_019860 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr17-3678 chr17 12613648 12613858 + 7.66 0.000 intron (NR_034145, intron 3 of 3) Tigger10|DNA|TcMar-Tigger -52137 NM_001146312 93649 Hs.462257 NM_153604 ENSG00000141052 MYOCD MYCD myocardin protein-coding chr22-2566 chr22 27715351 27715561 + 7.66 0.000 Intergenic Intergenic 86300 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr10-5114 chr10 49284490 49284700 + 7.66 0.000 Intergenic MER5B|DNA|hAT-Charlie 14298 NR_108038 100506769 Hs.562293 NR_108038 C10orf71-AS1 - C10orf71 antisense RNA 1 ncRNA chr17-5142 chr17 8095448 8095658 + 7.66 0.000 TTS (NM_021628) TTS (NM_021628) 7497 NR_036201 100422983 NR_036201 ENSG00000264005 MIR4314 - microRNA 4314 ncRNA chr4-3917 chr4 153483495 153483705 + 7.66 0.000 intron (NM_001131007, intron 3 of 34) AluJo|SINE|Alu 17240 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr7-4841 chr7 102220847 102221057 + 7.66 0.000 intron (NM_001202543, intron 20 of 23) AluSz6|SINE|Alu -64189 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr12-6186 chr12 18081301 18081511 + 7.66 0.000 exon (NM_024730, exon 6 of 6) exon (NM_024730, exon 6 of 6) 8787 NR_104413 79785 Hs.732831 NM_024730 ENSG00000111404 RERGL - RERG like protein-coding chr4-4245 chr4 18396001 18396211 + 7.66 0.000 Intergenic Intergenic -374231 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr4-2256 chr4 168221176 168221386 + 7.66 0.000 intron (NM_017631, intron 36 of 37) intron (NM_017631, intron 36 of 37) 97471 NM_017631 55601 Hs.591710 NM_017631 ENSG00000137628 DDX60 - DExD/H-box helicase 60 protein-coding chr11-5098 chr11 118899869 118900079 + 7.66 0.000 exon (NM_182557, exon 7 of 8) exon (NM_182557, exon 7 of 8) 6582 NM_032966 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr3-10264 chr3 124043690 124043900 + 7.66 0.000 Intergenic Intergenic -50886 NM_001322988 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr3-7642 chr3 28805733 28805943 + 7.66 0.000 Intergenic L2c|LINE|L2 230560 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr16-5343 chr16 83573406 83573616 + 7.66 0.000 intron (NM_001220489, intron 6 of 12) intron (NM_001220489, intron 6 of 12) 65165 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr16-3352 chr16 30482721 30482931 + 7.66 0.000 intron (NM_002209, intron 7 of 30) AluJo|SINE|Alu 10084 NM_002209 3683 Hs.174103 NM_002209 ENSG00000005844 ITGAL CD11A|LFA-1|LFA1A integrin subunit alpha L protein-coding chr11-3077 chr11 14644653 14644863 + 7.66 0.000 exon (NM_001363569, exon 1 of 16) exon (NM_001363569, exon 1 of 16) 954 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr7-4776 chr7 77792601 77792811 + 7.66 0.000 Intergenic MER94|DNA|hAT-Blackjack 5728 NM_032936 85025 Hs.19025 NM_032936 ENSG00000135211 TMEM60 C7orf35|DC32 transmembrane protein 60 protein-coding chr12-2810 chr12 113007352 113007562 + 7.66 0.000 intron (NM_002535, intron 8 of 9) MIRb|SINE|MIR 28938 NM_016817 4939 Hs.414332 NM_002535 ENSG00000111335 OAS2 - 2'-5'-oligoadenylate synthetase 2 protein-coding chr16-4439 chr16 53334933 53335143 + 7.66 0.000 Intergenic L1MB7|LINE|L1 36174 NM_001347693 643802 Hs.451336 NM_001207030 LOC643802 - u3 small nucleolar ribonucleoprotein protein MPP10-like protein-coding chr21-1965 chr21 46250268 46250478 + 7.66 0.000 non-coding (NR_002776, exon 3 of 3) non-coding (NR_002776, exon 3 of 3) 21142 NR_110566 114044 Hs.655095 NR_002776 ENSG00000215424 MCM3AP-AS1 C21orf85|MCM3AP-AS|MCM3APAS|MCM3APASB|NCRNA00031 MCM3AP antisense RNA 1 ncRNA chr3-7158 chr3 186155766 186155976 + 7.66 0.000 intron (NM_001346, intron 24 of 24) L1M6|LINE|L1 -46782 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr1-10135 chr1 103327896 103328106 + 7.66 0.000 Intergenic Intergenic 197510 NM_001286997 101928436 Hs.558999 NM_001286997 LOC101928436 - uncharacterized LOC101928436 protein-coding chr20-1796 chr20 62219704 62219914 + 7.66 0.000 exon (NM_007232, exon 1 of 3) exon (NM_007232, exon 1 of 3) 469 NM_007232 11255 Hs.251399 NM_007232 ENSG00000101180 HRH3 GPCR97|HH3R histamine receptor H3 protein-coding chr16-4852 chr16 88050870 88051080 + 7.66 0.000 intron (NM_001173539, intron 11 of 12) AluJb|SINE|Alu 50010 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr18-3536 chr18 76389564 76389774 + 7.66 0.000 intron (NM_014643, intron 3 of 6) intron (NM_014643, intron 3 of 6) -101983 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr22-3432 chr22 39610823 39611033 + 7.66 0.000 intron (NM_001003406, intron 3 of 35) MLT1K|LTR|ERVL-MaLR 40175 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr8-5482 chr8 49274199 49274409 + 7.66 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 201960 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr19-4589 chr19 12000639 12000849 + 7.66 0.000 intron (NR_134929, intron 1 of 2) intron (NR_134929, intron 1 of 2) 13127 NR_134929 101928464 Hs.631643 NR_134927 ENSG00000219665 ZNF433-AS1 - ZNF433 and ZNF878 antisense RNA 1 ncRNA chr20-3307 chr20 12799097 12799307 + 7.66 0.000 Intergenic Intergenic 137761 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr3-7721 chr3 50444212 50444422 + 7.66 0.000 intron (NM_001291101, intron 2 of 37) MIR|SINE|MIR 59317 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr9-3675 chr9 98792167 98792377 + 7.66 0.000 intron (NM_173551, intron 1 of 14) L2b|LINE|L2 4283 NM_173551 203286 Hs.406890 NM_173551 ENSG00000165138 ANKS6 ANKRD14|NPHP16|PKDR1|SAMD6 ankyrin repeat and sterile alpha motif domain containing 6 protein-coding chr13-733 chr13 99980420 99980630 + 7.66 0.000 Intergenic CpG -1259 NM_007129 7546 Hs.653700 NM_007129 ENSG00000043355 ZIC2 HPE5 Zic family member 2 protein-coding chr5-2242 chr5 11904369 11904579 + 7.66 0.000 promoter-TSS (NR_109988) promoter-TSS (NR_109988) -28 NM_001332 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr11-2988 chr11 110092509 110092719 + 7.66 0.000 promoter-TSS (NM_033390) promoter-TSS (NM_033390) -778 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr11-10716 chr11 131208611 131208821 + 7.66 0.000 Intergenic Intergenic -161899 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr1-11108 chr1 230210138 230210348 + 7.66 0.000 intron (NM_004481, intron 3 of 15) intron (NM_004481, intron 3 of 15) 143005 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr1-11184 chr1 240960361 240960571 + 7.66 0.000 intron (NM_001350116, intron 4 of 16) AluJb|SINE|Alu -171806 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr15-2352 chr15 37708224 37708434 + 7.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -226278 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr2-9007 chr2 195531734 195531944 + 7.66 0.000 Intergenic Intergenic -125119 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr15-4089 chr15 73197496 73197706 + 7.66 0.000 intron (NM_002499, intron 7 of 28) L1M5|LINE|L1 -102309 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr8-3925 chr8 42096007 42096217 + 7.66 0.000 intron (NR_136589, intron 1 of 1) MER5A|DNA|hAT-Charlie -44125 NM_006766 7994 Hs.491577 NM_006766 ENSG00000083168 KAT6A MOZ|MRD32|MYST-3|MYST3|RUNXBP2|ZC2HC6A|ZNF220 lysine acetyltransferase 6A protein-coding chr8-4838 chr8 27666101 27666311 + 7.66 0.000 intron (NM_182826, intron 5 of 5) L1MEg|LINE|L1 32146 NM_182826 51435 Hs.128856 NM_016240 ENSG00000168077 SCARA3 APC7|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A member 3 protein-coding chr5-3561 chr5 59761157 59761367 + 7.66 0.000 intron (NM_001165899, intron 3 of 16) Tigger3b|DNA|TcMar-Tigger 7586 NM_001364602 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-12014 chr1 98468166 98468376 + 7.66 0.000 Intergenic Intergenic -193450 NR_033716 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr12-3708 chr12 5360876 5361086 + 7.66 0.000 Intergenic Intergenic -71127 NM_001102654 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr8-7035 chr8 112259736 112259946 + 7.66 0.000 intron (NM_001363185, intron 57 of 66) intron (NM_001363185, intron 57 of 66) -383652 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr13-2833 chr13 107961901 107962111 + 7.66 0.000 Intergenic Intergenic -94510 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding chr5-4274 chr5 142054085 142054295 + 7.66 0.000 Intergenic Intergenic -41163 NM_005471 10007 Hs.633853 NM_005471 ENSG00000113552 GNPDA1 GNP1|GNPDA|GNPI|GPI|HLN glucosamine-6-phosphate deaminase 1 protein-coding chr20-2217 chr20 62215777 62215987 + 7.66 0.000 3' UTR (NM_007232, exon 3 of 3) 3' UTR (NM_007232, exon 3 of 3) 4396 NM_007232 11255 Hs.251399 NM_007232 ENSG00000101180 HRH3 GPCR97|HH3R histamine receptor H3 protein-coding chr17-7376 chr17 7736323 7736533 + 7.66 0.000 intron (NM_020877, intron 7 of 85) intron (NM_020877, intron 7 of 85) -17892 NR_002778 118432 Hs.658086 NR_002778 ENSG00000240480 RPL29P2 RPL29_10_1510 ribosomal protein L29 pseudogene 2 pseudo chr4-3665 chr4 29219916 29220126 + 7.66 0.000 intron (NR_146996, intron 2 of 2) intron (NR_146996, intron 2 of 2) 5729 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr3-7040 chr3 172992415 172992625 + 7.66 0.000 intron (NM_031955, intron 4 of 10) intron (NM_031955, intron 4 of 10) 148715 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr1-13315 chr1 239731164 239731374 + 7.66 0.000 intron (NM_000740, intron 3 of 4) L2c|LINE|L2 -12150 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr1-12902 chr1 113164243 113164453 + 7.66 0.000 Intergenic Intergenic 41905 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr6-2351 chr6 130513838 130514048 + 7.66 0.000 Intergenic Intergenic 76826 NM_052913 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr6-4671 chr6 52876429 52876639 + 7.66 0.000 Intergenic MER89-int|LTR|ERV1 -30439 NM_153699 221357 Hs.646984 NM_153699 ENSG00000182793 GSTA5 - glutathione S-transferase alpha 5 protein-coding chr8-7535 chr8 144210607 144210817 + 7.66 0.000 intron (NM_001288814, intron 11 of 41) (TA)n|Simple_repeat|Simple_repeat 52025 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr7-7910 chr7 6977339 6977549 + 7.66 0.000 Intergenic L1PA4|LINE|L1 89601 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr5-3758 chr5 57095235 57095445 + 7.66 0.000 Intergenic L1PB1|LINE|L1 -78608 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr1-8271 chr1 36617099 36617309 + 7.66 0.000 Intergenic Intergenic -133890 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr17-6003 chr17 78077984 78078194 + 7.66 0.000 intron (NM_018996, intron 10 of 20) intron (NM_018996, intron 10 of 20) 33710 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr12-5617 chr12 54539375 54539585 + 7.66 0.000 intron (NM_001184976, intron 30 of 30) intron (NM_001184976, intron 30 of 30) -9913 NM_001288768 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding chr6-3808 chr6 33738596 33738806 + 7.66 0.000 intron (NM_054111, intron 1 of 5) MIR|SINE|MIR 8204 NM_054111 117283 Hs.17253 NM_054111 ENSG00000161896 IP6K3 IHPK3|INSP6K3 inositol hexakisphosphate kinase 3 protein-coding chr7-9601 chr7 148728866 148729076 + 7.66 0.000 intron (NM_001370664, intron 1 of 21) intron (NM_001370664, intron 1 of 21) 29261 NM_001370664 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr1-10184 chr1 110894189 110894399 + 7.66 0.000 intron (NM_001040033, intron 4 of 8) intron (NM_001040033, intron 4 of 8) 21146 NM_000560 963 Hs.443057 NM_000560 ENSG00000143119 CD53 MOX44|TSPAN25 CD53 molecule protein-coding chr1-5541 chr1 214792139 214792349 + 7.66 0.000 Intergenic ERVL-E-int|LTR|ERVL 189049 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr1-15026 chr1 93207360 93207570 + 7.66 0.000 intron (NM_001306076, intron 9 of 28) intron (NM_001306076, intron 9 of 28) 26749 NM_206886 343099 Hs.482873 NM_206886 ENSG00000122483 CCDC18 NY-SAR-41 coiled-coil domain containing 18 protein-coding chr4-7054 chr4 29540063 29540273 + 7.66 0.000 Intergenic LTR40a|LTR|ERVL 325876 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr2-13938 chr2 184677285 184677495 + 7.66 0.000 intron (NM_194250, intron 1 of 3) MLT1L|LTR|ERVL-MaLR 78861 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr17-5714 chr17 56807895 56808105 + 7.66 0.000 intron (NM_001085430, intron 6 of 7) intron (NM_001085430, intron 6 of 7) 25920 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr7-6510 chr7 22732822 22733032 + 7.66 0.000 TTS (NM_001318095) TTS (NM_001318095) -5307 NR_131935 541472 Hs.512234 NR_131935 ENSG00000179428 LOC541472 - uncharacterized LOC541472 ncRNA chr12-6517 chr12 108765960 108766170 + 7.66 0.000 Intergenic AluSc|SINE|Alu -34515 NM_014325 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr17-5846 chr17 67186928 67187138 + 7.66 0.000 intron (NM_001330447, intron 12 of 32) MER58A|DNA|hAT-Charlie -57743 NR_136398 101928021 Hs.569824 NR_136398 LOC101928021 - uncharacterized LOC101928021 ncRNA chr3-4528 chr3 122555799 122556009 + 7.66 0.000 exon (NM_001146106, exon 4 of 10) exon (NM_001146106, exon 4 of 10) 8396 NM_001146105 83666 Hs.518200 NM_031458 ENSG00000138496 PARP9 ARTD9|BAL|BAL1|MGC:7868 poly(ADP-ribose) polymerase family member 9 protein-coding chr13-3991 chr13 66967024 66967234 + 7.66 0.000 intron (NM_001318372, intron 2 of 4) intron (NM_001318372, intron 2 of 4) -10260 NR_046636 100874086 Hs.577908 NR_046636 ENSG00000225263 PCDH9-AS3 - PCDH9 antisense RNA 3 ncRNA chr5-8229 chr5 109533719 109533929 + 7.66 0.000 Intergenic L1MEg|LINE|L1 -123850 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr12-7129 chr12 47768613 47768823 + 7.66 0.000 Intergenic Intergenic -4520 NM_017842 55652 Hs.438867 NM_017842 ENSG00000211584 SLC48A1 HRG-1|HRG1|hHRG-1 solute carrier family 48 member 1 protein-coding chr10-4669 chr10 128615152 128615362 + 7.66 0.000 Intergenic Intergenic -297576 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr7-9186 chr7 115829987 115830197 + 7.66 0.000 Intergenic Intergenic 138221 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr3-10665 chr3 149977541 149977751 + 7.66 0.000 Intergenic Intergenic 5720 NM_001079809 653659 Hs.652908 NM_001079809 TMEM183B C1ORF37DUP|C1orf37-DUP transmembrane protein 183B protein-coding chr16-4399 chr16 50315028 50315238 + 7.66 0.000 TTS (NM_001173984) TTS (NM_001173984) 22517 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chr10-2896 chr10 114949918 114950128 + 7.66 0.000 intron (NM_139169, intron 2 of 7) AluSp|SINE|Alu 11828 NM_139169 142940 Hs.21187 NM_139169 ENSG00000165832 TRUB1 PUS4 TruB pseudouridine synthase family member 1 protein-coding chr10-8317 chr10 78559449 78559659 + 7.66 0.000 Intergenic MIR3|SINE|MIR 292212 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr1-16032 chr1 200930036 200930246 + 7.66 0.000 intron (NR_147176, intron 2 of 15) intron (NR_147176, intron 2 of 15) 1197 NR_147176 647215 Hs.576504 NR_147176 ENSG00000233217 MROH3P C1orf81 maestro heat like repeat family member 3, pseudogene pseudo chr16-2959 chr16 8884945 8885155 + 7.66 0.000 Intergenic AluSz|SINE|Alu -16038 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr15-5093 chr15 88330939 88331149 + 7.66 0.000 Intergenic L1ME4a|LINE|L1 -74305 NM_002530 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr8-2639 chr8 69485152 69485362 + 7.66 0.000 intron (NM_001128204, intron 1 of 21) intron (NM_001128204, intron 1 of 21) -7590 NR_156415 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr4-2278 chr4 187309713 187309923 + 7.66 0.000 intron (NR_038931, intron 1 of 4) Tigger1|DNA|TcMar-Tigger -60830 NR_149103 105377602 Hs.582096 NR_149103 ENSG00000250042 LINC02514 - long intergenic non-protein coding RNA 2514 ncRNA chr11-6321 chr11 62103290 62103500 + 7.66 0.000 Intergenic MER4D|LTR|ERV1 -20616 NM_020238 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr2-10253 chr2 118805215 118805425 + 7.66 0.000 Intergenic Intergenic 42863 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr4-4774 chr4 100012238 100012448 + 7.66 0.000 intron (NR_125923, intron 1 of 3) HAL1|LINE|L1 61849 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chrX-3141 chrX 17048113 17048323 + 7.66 0.000 intron (NM_001080975, intron 6 of 17) intron (NM_001080975, intron 6 of 17) 101560 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr3-4205 chr3 131787406 131787616 + 7.66 0.000 intron (NM_130808, intron 2 of 15) LTR16A|LTR|ERVL 198420 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr10-8224 chr10 73516075 73516285 + 7.66 0.000 intron (NR_146997, intron 18 of 21) intron (NR_146997, intron 18 of 21) -20156 NM_001142353 5532 Hs.500067 NM_021132 ENSG00000107758 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3 catalytic subunit beta protein-coding chr2-8613 chr2 141838618 141838828 + 7.66 0.000 intron (NM_018557, intron 1 of 90) intron (NM_018557, intron 1 of 90) 292978 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr8-2927 chr8 16122653 16122863 + 7.66 0.000 intron (NM_138715, intron 8 of 9) intron (NM_138715, intron 8 of 9) 63514 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr20-3893 chr20 31746341 31746551 + 7.66 0.000 intron (NM_012112, intron 2 of 17) intron (NM_012112, intron 2 of 17) 7156 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr8-3477 chr8 100364812 100365022 + 7.66 0.000 Intergenic FLAM_A|SINE|Alu -17846 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr2-11257 chr2 174300538 174300748 + 7.66 0.000 Intergenic Intergenic -25384 NR_038897 285084 Hs.275398 NR_038897 ENSG00000231453 LINC01305 - long intergenic non-protein coding RNA 1305 ncRNA chr3-9592 chr3 56303567 56303777 + 7.66 0.000 intron (NR_132749, intron 2 of 17) intron (NR_132749, intron 2 of 17) 164795 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr17-8122 chr17 57752986 57753196 + 7.66 0.000 Intergenic MER5B|DNA|hAT-Charlie -7792 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr15-4108 chr15 77800161 77800371 + 7.66 0.000 intron (NM_001301186, intron 1 of 5) intron (NM_001301186, intron 1 of 5) -13217 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr11-9074 chr11 30255066 30255276 + 7.66 0.000 Intergenic Intergenic 24157 NM_001018080 2488 Hs.36975 NM_000510 ENSG00000131808 FSHB HH24 follicle stimulating hormone subunit beta protein-coding chr2-4098 chr2 144894707 144894917 + 7.66 0.000 intron (NR_033870, intron 2 of 4) intron (NR_033870, intron 2 of 4) 226845 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr12-7771 chr12 95758098 95758308 + 7.66 0.000 intron (NM_001329701, intron 2 of 9) L1MEc|LINE|L1 31992 NM_001329702 59277 Hs.201034 NM_021229 ENSG00000074527 NTN4 PRO3091 netrin 4 protein-coding chr5-1741 chr5 172065909 172066119 + 7.66 0.000 intron (NM_005990, intron 12 of 18) intron (NM_005990, intron 12 of 18) -59141 NM_012300 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr1-8402 chr1 81157752 81157962 + 7.66 0.000 Intergenic Intergenic -148335 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr10-8900 chr10 114403899 114404109 + 7.66 0.000 intron (NM_001351068, intron 1 of 19) CpG 498 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr9-2370 chr9 119734671 119734881 + 7.66 0.000 Intergenic L1MD2|LINE|L1 -200284 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr9-6966 chr9 106092513 106092723 + 7.66 0.000 Intergenic L1M5|LINE|L1 398077 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr2-10340 chr2 159251406 159251616 + 7.66 0.000 intron (NM_001330279, intron 8 of 9) intron (NM_001330279, intron 8 of 9) 35192 NM_001330278 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr6-5004 chr6 108872315 108872525 + 7.66 0.000 intron (NM_001286609, intron 3 of 16) intron (NM_001286609, intron 3 of 16) 23998 NM_032131 84071 Hs.645481 NM_032131 ENSG00000118690 ARMC2 SPGF38|bA787I22.1 armadillo repeat containing 2 protein-coding chr3-10082 chr3 109037584 109037794 + 7.66 0.000 intron (NM_014429, intron 14 of 27) L1PA6|LINE|L1 -63767 NR_144461 100506506 Hs.278908 NR_144461 ENSG00000239314 MORC1-AS1 - MORC1 antisense RNA 1 ncRNA chr5-9005 chr5 165184754 165184964 + 7.66 0.000 Intergenic L1PB1|LINE|L1 714580 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr1-5434 chr1 36665563 36665773 + 7.66 0.000 Intergenic Intergenic -182354 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr7-9325 chr7 128533573 128533783 + 7.66 0.000 Intergenic Intergenic 56949 NM_018396 55798 Hs.433213 NM_018396 ENSG00000165055 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding chr11-4642 chr11 33531878 33532088 + 7.66 0.000 intron (NM_012194, intron 1 of 20) intron (NM_012194, intron 1 of 20) 155875 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr1-11927 chr1 59914683 59914893 + 7.66 0.000 intron (NM_000775, intron 2 of 8) LTR5B|LTR|ERVK 11985 NM_000775 1573 Hs.152096 NM_000775 ENSG00000134716 CYP2J2 CPJ2|CYPIIJ2 cytochrome P450 family 2 subfamily J member 2 protein-coding chr15-4049 chr15 65580350 65580560 + 7.66 0.000 intron (NR_045106, intron 11 of 11) intron (NR_045106, intron 11 of 11) 30676 NR_045105 81556 Hs.6686 NM_030800 ENSG00000138614 INTS14 C15orf44|VWA9 integrator complex subunit 14 protein-coding chr13-4267 chr13 97660860 97661070 + 7.66 0.000 Intergenic Intergenic 226796 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr11-5774 chr11 4469789 4469999 + 7.66 0.000 Intergenic L2|LINE|L2 -18985 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr10-5674 chr10 98772425 98772635 + 7.66 0.000 intron (NM_021828, intron 3 of 11) ERV3-16A3_I-int|LTR|ERVL 152038 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr10-7977 chr10 59000487 59000697 + 7.66 0.000 intron (NR_108046, intron 1 of 1) intron (NR_108046, intron 1 of 1) 1074 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA chr12-4432 chr12 9917560 9917770 + 7.66 0.000 intron (NM_207375, intron 3 of 4) L1PA13|LINE|L1 14705 NM_207375 387836 Hs.527665 NM_207375 ENSG00000188393 CLEC2A INPE5792|KACL|PILAR|UNQ5792 C-type lectin domain family 2 member A protein-coding chr4-5851 chr4 113633965 113634175 + 7.66 0.000 intron (NM_001221, intron 3 of 18) intron (NM_001221, intron 3 of 18) 127668 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr3-5555 chr3 4272384 4272594 + 7.66 0.000 Intergenic LTR16A|LTR|ERVL -30815 NM_001320677 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr7-5339 chr7 28472106 28472316 + 7.66 0.000 intron (NM_004904, intron 1 of 10) intron (NM_004904, intron 1 of 10) 36596 NM_004904 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr2-9352 chr2 227167377 227167587 + 7.66 0.000 intron (NM_000091, intron 1 of 51) intron (NM_000091, intron 1 of 51) 2917 NM_000091 1285 Hs.570065 NM_000091 ENSG00000169031 COL4A3 ATS2|ATS3 collagen type IV alpha 3 chain protein-coding chr11-7629 chr11 57348106 57348316 + 7.66 0.000 exon (NM_002559, exon 5 of 12) exon (NM_002559, exon 5 of 12) 9859 NM_002559 5024 Hs.146738 NM_002559 ENSG00000109991 P2RX3 P2X3 purinergic receptor P2X 3 protein-coding chrX-3251 chrX 78209902 78210112 + 7.66 0.000 Intergenic L1PA10|LINE|L1 -70357 NM_015975 51616 Hs.592248 NM_015975 ENSG00000187325 TAF9B DN-7|DN7|TAF9L|TAFII31L|TFIID-31 TATA-box binding protein associated factor 9b protein-coding chr22-3807 chr22 30332762 30332972 + 7.66 0.000 3' UTR (NM_005877, exon 16 of 16) 3' UTR (NM_005877, exon 16 of 16) -5926 NM_001204240 83874 Hs.655273 NM_031937 ENSG00000099992 TBC1D10A EPI64|TBC1D10|dJ130H16.1|dJ130H16.2 TBC1 domain family member 10A protein-coding chrX-1716 chrX 23285071 23285281 + 7.66 0.000 intron (NR_073010, intron 1 of 11) intron (NR_073010, intron 1 of 11) 7970 NR_073010 100873065 Hs.628459 NR_046436 PTCHD1-AS DDX53-AS1|PTCHD1AS1|PTCHD1AS2 PTCHD1 antisense RNA (head to head) ncRNA chr10-2649 chr10 92436155 92436365 + 7.66 0.000 Intergenic AluSx1|SINE|Alu 17599 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - microtubule affinity regulating kinase 2 pseudogene 9 pseudo chr9-5463 chr9 98772828 98773038 + 7.66 0.000 intron (NM_173551, intron 9 of 14) L2c|LINE|L2 23622 NM_173551 203286 Hs.406890 NM_173551 ENSG00000165138 ANKS6 ANKRD14|NPHP16|PKDR1|SAMD6 ankyrin repeat and sterile alpha motif domain containing 6 protein-coding chr1-12772 chr1 76555700 76555910 + 7.66 0.000 intron (NM_001349109, intron 3 of 3) intron (NM_001349109, intron 3 of 3) 223462 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr3-4292 chr3 157130480 157130690 + 7.66 0.000 Intergenic MIRc|SINE|MIR -7583 NR_034007 339894 Hs.478050 NR_034007 ENSG00000243629 LINC00880 - long intergenic non-protein coding RNA 880 ncRNA chr10-4984 chr10 30877175 30877385 + 7.66 0.000 intron (NM_001143766, intron 5 of 7) intron (NM_001143766, intron 5 of 7) 122237 NM_001143769 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr22-1165 chr22 23539636 23539846 + 7.66 0.000 intron (NR_109832, intron 2 of 3) HERVK-int|LTR|ERVK 1639 NR_109832 101978785 Hs.575107 NR_109832 PCAT14 - prostate cancer associated transcript 14 ncRNA chr2-13707 chr2 166351787 166351997 + 7.66 0.000 intron (NM_001365536, intron 1 of 26) intron (NM_001365536, intron 1 of 26) 24052 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr9-7494 chr9 31030783 31030993 + 7.66 0.000 Intergenic Intergenic 350602 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr11-3649 chr11 98003815 98004025 + 7.66 0.000 Intergenic Intergenic -1017029 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr17-3975 chr17 64780821 64781031 + 7.66 0.000 TTS (NR_106728) TTS (NR_106728) 167 NR_106728 102464831 NR_106728 ENSG00000278581 MIR6080 hsa-mir-6080 microRNA 6080 ncRNA chr1-6966 chr1 160284103 160284313 + 7.66 0.000 intron (NM_001193644, intron 1 of 7) intron (NM_001193644, intron 1 of 7) 943 NR_036492 5824 Hs.517232 NM_002857 ENSG00000162735 PEX19 D1S2223E|HK33|PBD12A|PMP1|PMPI|PXF|PXMP1 peroxisomal biogenesis factor 19 protein-coding chrX-469 chrX 9781101 9781311 + 7.66 0.000 Intergenic AluY|SINE|Alu -5223 NM_001649 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr22-4235 chr22 46891983 46892193 + 7.66 0.000 intron (NM_001284305, intron 6 of 12) intron (NM_001284305, intron 6 of 12) 23954 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr11-4911 chr11 62922169 62922379 + 7.66 0.000 promoter-TSS (NM_000738) promoter-TSS (NM_000738) -911 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr5-8182 chr5 105101532 105101742 + 7.66 0.000 Intergenic Intergenic 2163 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr19-3269 chr19 2683679 2683889 + 7.66 0.000 intron (NM_052847, intron 1 of 4) intron (NM_052847, intron 1 of 4) 18910 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr20-2002 chr20 50609826 50610036 + 7.66 0.000 intron (NM_001290268, intron 6 of 21) intron (NM_001290268, intron 6 of 21) 4854 NR_031634 100302146 NR_031634 ENSG00000221091 MIR1302-5 MIRN1302-5|hsa-mir-1302-5 microRNA 1302-5 ncRNA chr6-5212 chr6 133621246 133621456 + 7.66 0.000 intron (NR_109982, intron 4 of 8) AluJb|SINE|Alu -199796 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr11-7235 chr11 3810717 3810927 + 7.66 0.000 intron (NR_144430, intron 1 of 3) intron (NR_144430, intron 1 of 3) 2262 NR_144428 27315 Hs.133968 NM_014489 ENSG00000148985 PGAP2 CWH43-N|FRAG1|HPMRS3|MRT17|MRT21 post-GPI attachment to proteins 2 protein-coding chr13-2302 chr13 31627536 31627746 + 7.66 0.000 Intergenic Intergenic -111885 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr19-6032 chr19 2021643 2021853 + 7.66 0.000 Intergenic Intergenic -6034 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr22-1806 chr22 32875776 32875986 + 7.66 0.000 intron (NM_003490, intron 4 of 13) MLT1C|LTR|ERVL-MaLR 75065 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr11-10193 chr11 95565316 95565526 + 7.66 0.000 Intergenic Intergenic 224361 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr2-10768 chr2 40811760 40811970 + 7.66 0.000 Intergenic Intergenic -299430 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr13-3696 chr13 36883342 36883552 + 7.66 0.000 intron (NM_001127217, intron 1 of 6) intron (NM_001127217, intron 1 of 6) 36791 NM_005905 4093 Hs.123119 NM_005905 ENSG00000120693 SMAD9 MADH6|MADH9|PPH2|SMAD8|SMAD8/9|SMAD8A|SMAD8B SMAD family member 9 protein-coding chr6-2760 chr6 124432194 124432404 + 7.66 0.000 intron (NM_153355, intron 3 of 5) intron (NM_153355, intron 3 of 5) 149294 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr8-6452 chr8 61415069 61415279 + 7.66 0.000 intron (NM_173519, intron 3 of 5) intron (NM_173519, intron 3 of 5) 127204 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr3-4664 chr3 40356623 40356833 + 7.66 0.000 Intergenic Intergenic -30456 NM_001248 956 Hs.441145 NM_001248 ENSG00000168032 ENTPD3 CD39L3|HB6|NTPDase-3 ectonucleoside triphosphate diphosphohydrolase 3 protein-coding chrX-1236 chrX 92115492 92115702 + 7.66 0.000 intron (NM_001168362, intron 2 of 4) MLT2A2|LTR|ERVL 280136 NM_001168362 27328 Hs.655673 NM_014522 ENSG00000102290 PCDH11X PCDH-X|PCDH-Y|PCDH11|PCDH11Y|PCDH22|PCDHX|PPP1R119 protocadherin 11 X-linked protein-coding chr19-3221 chr19 55724087 55724297 + 7.66 0.000 intron (NM_176820, intron 3 of 8) intron (NM_176820, intron 3 of 8) 14210 NM_176820 338321 Hs.661568 NM_176820 ENSG00000185792 NLRP9 CLR19.1|NALP9|NOD6|PAN12 NLR family pyrin domain containing 9 protein-coding chr11-10693 chr11 129299592 129299802 + 7.66 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -16533 NR_145484 399975 NM_207431 LOC399975 - uncharacterized LOC399975 ncRNA chr9-8601 chr9 128317430 128317640 + 7.66 0.000 intron (NM_001329861, intron 1 of 6) intron (NM_001329861, intron 1 of 6) 4683 NM_001329862 26995 Hs.632685 NM_015679 ENSG00000167112 TRUB2 CLONE24922 TruB pseudouridine synthase family member 2 protein-coding chr5-7694 chr5 56206132 56206342 + 7.66 0.000 intron (NM_024669, intron 2 of 11) AluJb|SINE|Alu 27093 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr1-13751 chr1 16187755 16187965 + 7.66 0.000 Intergenic Intergenic 24792 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr2-5993 chr2 73603319 73603529 + 7.66 0.000 intron (NM_015120, intron 21 of 22) intron (NM_015120, intron 21 of 22) 38998 NM_003960 9027 Hs.14637 NM_003960 ENSG00000144035 NAT8 ATase2|CCNAT|CML1|GLA|Hcml1|TSC501|TSC510 N-acetyltransferase 8 (putative) protein-coding chr15-3923 chr15 35847028 35847238 + 7.66 0.000 intron (NR_038251, intron 2 of 2) intron (NR_038251, intron 2 of 2) -79723 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr6-2444 chr6 2971586 2971796 + 7.66 0.000 promoter-TSS (NM_001271823) promoter-TSS (NM_001271823) -124 NM_001271822 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr12-3539 chr12 132632652 132632862 + 7.66 0.000 exon (NM_006231, exon 44 of 49) exon (NM_006231, exon 44 of 49) 13981 NM_174872 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr9-2393 chr9 131581448 131581658 + 7.66 0.000 intron (NM_198679, intron 22 of 23) AluSx|SINE|Alu 36030 NM_001365666 642515 NM_001365666 ENSG00000283526 PRRT1B DSPD2|IFITMD8 proline rich transmembrane protein 1B protein-coding chr18-1053 chr18 14086404 14086614 + 7.66 0.000 intron (NR_033354, intron 1 of 5) L1M3e|LINE|L1 45926 NM_145287 162655 Hs.352635 NM_145287 ENSG00000175322 ZNF519 HsT2362 zinc finger protein 519 protein-coding chr8-6122 chr8 28782267 28782477 + 7.66 0.000 intron (NR_026826, intron 9 of 14) intron (NR_026826, intron 9 of 14) 80871 NR_073469 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr6-4218 chr6 4481296 4481506 + 7.66 0.000 Intergenic L1M3|LINE|L1 -7397 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr6-5529 chr6 167350169 167350379 + 7.66 0.000 Intergenic Intergenic 25188 NM_031949 83887 Hs.520554 NM_031949 ENSG00000120440 TTLL2 C6orf104|NYD-TSPG|dJ366N23.3 tubulin tyrosine ligase like 2 protein-coding chr2-11315 chr2 197677548 197677758 + 7.66 0.000 Intergenic Intergenic -2066 NM_144629 130132 Hs.591615 NM_144629 ENSG00000162944 RFTN2 C2orf11|Raftlin-2 raftlin family member 2 protein-coding chr12-8197 chr12 122961540 122961750 + 7.66 0.000 intron (NM_001243014, intron 1 of 11) L2a|LINE|L2 4818 NM_001243014 23457 Hs.511951 NM_019624 ENSG00000150967 ABCB9 EST122234|TAPL ATP binding cassette subfamily B member 9 protein-coding chr18-2968 chr18 22637766 22637976 + 7.66 0.000 Intergenic Intergenic 148966 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr10-4870 chr10 16380079 16380289 + 7.66 0.000 Intergenic MIRb|SINE|MIR -56759 NM_001261836 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr17-8593 chr17 80523915 80524125 + 7.66 0.000 Intergenic Intergenic -20818 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr10-6126 chr10 132933843 132934053 + 7.66 0.000 intron (NM_001200049, intron 8 of 57) MLT1E1A|LTR|ERVL-MaLR 8622 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr17-3938 chr17 60422782 60422992 + 7.66 0.000 intron (NM_181707, intron 1 of 5) intron (NM_181707, intron 1 of 5) 398 NM_181707 124773 Hs.129312 NM_181707 ENSG00000141371 C17orf64 - chromosome 17 open reading frame 64 protein-coding chrX-3929 chrX 9720846 9721056 + 7.66 0.000 Intergenic Intergenic 44896 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr20-2328 chr20 9901073 9901283 + 7.66 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -62102 NM_177990 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr1-10603 chr1 177126828 177127038 + 7.66 0.000 intron (NM_207108, intron 1 of 21) intron (NM_207108, intron 1 of 21) 37779 NM_004319 460 Hs.495897 NM_004319 ENSG00000152092 ASTN1 ASTN astrotactin 1 protein-coding chr7-9745 chr7 158556723 158556933 + 7.66 0.000 intron (NM_130843, intron 1 of 21) CpG -15052 NM_001308268 5799 Hs.490789 NM_002847 ENSG00000155093 PTPRN2 IA-2beta|IAR|ICAAR|PTPRP|R-PTP-N2 protein tyrosine phosphatase receptor type N2 protein-coding chr7-9675 chr7 152603022 152603232 + 7.66 0.000 Intergenic Intergenic 73014 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr18-2382 chr18 75538682 75538892 + 7.66 0.000 Intergenic MER20|DNA|hAT-Charlie -111084 NM_001037331 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr3-9157 chr3 33128885 33129095 + 7.66 0.000 intron (NM_006371, intron 3 of 6) intron (NM_006371, intron 3 of 6) 15032 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr4-3499 chr4 142701301 142701511 + 7.66 0.000 intron (NM_003866, intron 2 of 26) intron (NM_003866, intron 2 of 26) 145129 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr1-13693 chr1 12729923 12730133 + 7.66 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 13913 NR_111984 126767 Hs.464705 NM_001103169 ENSG00000188984 AADACL3 - arylacetamide deacetylase like 3 protein-coding chr15-2981 chr15 51931906 51932116 + 7.66 0.000 Intergenic AluSx|SINE|Alu -7891 NR_109775 100422556 Hs.664788 NR_109775 LOC100422556 - LEO1 homolog, Paf1/RNA polymerase II complex component pseudogene pseudo chr4-2623 chr4 147453712 147453922 + 7.66 0.000 Intergenic HAL1ME|LINE|L1 -27100 NM_001166055 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr5-1577 chr5 157569313 157569523 + 7.66 0.000 intron (NM_033274, intron 2 of 22) AluJr|SINE|Alu 6357 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr7-7705 chr7 158251953 158252163 + 7.66 0.000 intron (NM_001308267, intron 2 of 21) intron (NM_001308267, intron 2 of 21) 280755 NR_030325 693180 NR_030325 ENSG00000207637 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA chr21-689 chr21 23159170 23159380 + 7.66 0.000 Intergenic Intergenic 79991 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA chr2-6010 chr2 86037991 86038201 + 7.66 0.000 intron (NM_015425, intron 27 of 33) intron (NM_015425, intron 27 of 33) 67790 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr13-3914 chr13 55864270 55864480 + 7.66 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 689921 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr5-4206 chr5 119049920 119050130 + 7.66 0.000 intron (NR_134250, intron 1 of 2) LTR26B|LTR|ERV1 -12364 NR_134249 105379143 Hs.636285 NR_134249 ENSG00000249494 LOC105379143 - uncharacterized LOC105379143 ncRNA chr5-6283 chr5 109309977 109310187 + 7.66 0.000 intron (NR_149040, intron 3 of 3) intron (NR_149040, intron 3 of 3) 16287 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr12-3984 chr12 18943973 18944183 + 7.66 0.000 Intergenic Intergenic -185655 NM_001143821 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr12-4049 chr12 49750535 49750745 + 7.66 0.000 intron (NM_001098576, intron 1 of 9) intron (NM_001098576, intron 1 of 9) 8831 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr18-3482 chr18 71444399 71444609 + 7.66 0.000 Intergenic L1MEc|LINE|L1 134452 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr10-7243 chr10 124635710 124635920 + 7.66 0.000 intron (NM_014661, intron 4 of 4) L1MC5a|LINE|L1 -68213 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr3-10471 chr3 134059277 134059487 + 7.66 0.000 Intergenic Intergenic -1734 NR_135574 100507210 Hs.669052 NR_135574 ENSG00000243832 LINC02000 - long intergenic non-protein coding RNA 2000 ncRNA chr9-3981 chr9 137515126 137515336 + 7.66 0.000 intron (NM_001098537, intron 12 of 34) intron (NM_001098537, intron 12 of 34) 35171 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr9-7822 chr9 82128171 82128381 + 7.66 0.000 Intergenic Intergenic 139504 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr8-4544 chr8 124261995 124262205 + 7.66 0.000 Intergenic Intergenic -14702 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr21-717 chr21 34372772 34372982 + 7.66 0.000 Intergenic Intergenic -2573 NM_058182 54065 Hs.656195 NM_058182 ENSG00000205670 SMIM11A C21orf51|FAM165B|SMIM11|SMIM11B small integral membrane protein 11A protein-coding chr13-2687 chr13 88954197 88954407 + 7.66 0.000 Intergenic MER54A|LTR|ERVL -280989 NR_047025 100874172 Hs.569291 NR_047025 LINC00440 - long intergenic non-protein coding RNA 440 ncRNA chr3-4989 chr3 17935446 17935656 + 7.66 0.000 Intergenic Intergenic -27001 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chrX-2496 chrX 91381419 91381629 + 7.66 0.000 Intergenic L1MA3|LINE|L1 -53315 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chrX-1348 chrX 137811243 137811453 + 7.66 0.000 Intergenic Intergenic 245221 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr12-8287 chr12 125904055 125904265 + 7.66 0.000 Intergenic MLT2B4|LTR|ERVL 79214 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr8-2671 chr8 86161418 86161628 + 7.66 0.000 Intergenic AluJr|SINE|Alu 62613 NM_152565 245972 Hs.436360 NM_152565 ENSG00000147614 ATP6V0D2 ATP6D2|VMA6 ATPase H+ transporting V0 subunit d2 protein-coding chr22-3331 chr22 22339151 22339361 + 7.66 0.000 Intergenic L1MB3|LINE|L1 41158 NR_027293 96610 Hs.449601 NM_080926 BMS1P20 IGL|IGLV|IGLV1 BMS1 pseudogene 20 pseudo chr1-7449 chr1 57586821 57587031 + 7.66 0.000 intron (NM_001353980, intron 4 of 5) intron (NM_001353980, intron 4 of 5) -162005 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr2-10541 chr2 236243331 236243541 + 7.66 0.000 intron (NM_212556, intron 1 of 5) intron (NM_212556, intron 1 of 5) 20909 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr6-2496 chr6 107811653 107811863 + 7.66 0.000 intron (NM_198081, intron 1 of 7) intron (NM_198081, intron 1 of 7) 12555 NM_001286408 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr2-13223 chr2 123541565 123541775 + 7.66 0.000 Intergenic L1PA8|LINE|L1 -468189 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr17-5299 chr17 22301668 22301878 + 7.66 0.000 Intergenic Intergenic 3009 NR_028336 284123 Hs.348578 NM_203392 ENSG00000178130 FAM27E5 FAM27L family with sequence similarity E5 ncRNA chr5-6818 chr5 103744305 103744515 + 7.66 0.000 Intergenic Intergenic -181621 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr10-6692 chr10 119334856 119335066 + 7.66 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -43011 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr7-7800 chr7 2194282 2194492 + 7.66 0.000 intron (NM_001013837, intron 10 of 18) MER58A|DNA|hAT-Charlie 38558 NM_001013837 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr20-2999 chr20 44840282 44840492 + 7.66 0.000 Intergenic AluJo|SINE|Alu -29841 NM_001205317 140730 Hs.517065 NM_182970 ENSG00000101098 RIMS4 C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma regulating synaptic membrane exocytosis 4 protein-coding chr14-3635 chr14 69806585 69806795 + 7.66 0.000 Intergenic L1M7|LINE|L1 -5070 NR_149012 100506358 NR_149012 LOC100506358 - uncharacterized LOC100506358 ncRNA chr15-1825 chr15 40678997 40679207 + 7.66 0.000 Intergenic L1MA3|LINE|L1 16003 NR_040058 100505648 Hs.586876 NR_040058 ENSG00000245849 RAD51-AS1 TODRA RAD51 antisense RNA 1 ncRNA chr7-4535 chr7 2064312 2064522 + 7.66 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 24635 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr1-9360 chr1 29469535 29469745 + 7.66 0.000 Intergenic Intergenic -119526 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr12-4546 chr12 27099940 27100150 + 7.66 0.000 Intergenic Intergenic -17523 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr1-6717 chr1 59008144 59008354 + 7.66 0.000 Intergenic Intergenic -12227 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chrX-2476 chrX 86729159 86729369 + 7.66 0.000 intron (NM_001139515, intron 6 of 11) MSTB-int|LTR|ERVL-MaLR 466296 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr6-3116 chr6 99905599 99905809 + 7.66 0.000 Intergenic Intergenic -88334 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr8-2025 chr8 103184619 103184829 + 7.66 0.000 intron (NM_001024372, intron 1 of 1) intron (NM_001024372, intron 1 of 1) -12584 NR_109954 100499183 Hs.654812 NR_034092 ENSG00000247081 BAALC-AS1 FZD6-DT|lncFZD6 BAALC antisense RNA 1 ncRNA chr11-10065 chr11 84568980 84569190 + 7.66 0.000 intron (NM_001351274, intron 5 of 26) L1M3b|LINE|L1 151857 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr13-1374 chr13 98014749 98014959 + 7.66 0.000 intron (NM_002271, intron 22 of 28) (TTTCT)n|Simple_repeat|Simple_repeat 61179 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr1-13055 chr1 175367373 175367583 + 7.66 0.000 intron (NM_003285, intron 9 of 22) intron (NM_003285, intron 9 of 22) -174491 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chrX-3459 chrX 26421249 26421459 + 7.66 0.000 Intergenic L1PA7|LINE|L1 -136983 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr9-7720 chr9 73285468 73285678 + 7.66 0.000 Intergenic AluSc|SINE|Alu 133708 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr19-5401 chr19 13272072 13272282 + 7.66 0.000 intron (NM_023035, intron 24 of 46) intron (NM_023035, intron 24 of 46) 121766 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr9-6239 chr9 123656536 123656746 + 7.66 0.000 intron (NM_001352968, intron 7 of 18) intron (NM_001352968, intron 7 of 18) -171019 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr14-1691 chr14 99139260 99139470 + 7.66 0.000 Intergenic Intergenic 132832 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr18-2353 chr18 39799595 39799805 + 7.66 0.000 Intergenic AluY|SINE|Alu -42009 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr21-1785 chr21 37850085 37850295 + 7.66 0.000 intron (NM_002240, intron 1 of 3) intron (NM_002240, intron 1 of 3) 66267 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr5-6528 chr5 6448116 6448326 + 7.66 0.000 promoter-TSS (NM_001145161) promoter-TSS (NM_001145161) -638 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr10-3478 chr10 63432282 63432492 + 7.66 0.000 intron (NM_001322258, intron 1 of 24) LTR72B|LTR|ERV1 1812 NR_134312 105378330 Hs.602852 NR_134312 LOC105378330 - uncharacterized LOC105378330 ncRNA chr4-2142 chr4 78152523 78152733 + 7.66 0.000 intron (NM_001166133, intron 2 of 41) (T)n|Simple_repeat|Simple_repeat 95058 NM_001166133 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr11-8507 chr11 122224801 122225011 + 7.66 0.000 intron (NR_137180, intron 2 of 4) intron (NR_137180, intron 2 of 4) -21797 NR_137182 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr5-4886 chr5 66898584 66898794 + 7.66 0.000 intron (NM_015183, intron 1 of 27) intron (NM_015183, intron 1 of 27) -60384 NM_001290226 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr11-9187 chr11 36478819 36479029 + 7.66 0.000 Intergenic Intergenic 31348 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr2-7175 chr2 205158438 205158648 + 7.66 0.000 intron (NM_152526, intron 10 of 21) intron (NM_152526, intron 10 of 21) -523957 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr3-10663 chr3 149872206 149872416 + 7.66 0.000 intron (NM_183383, intron 3 of 8) intron (NM_183383, intron 3 of 8) 59623 NM_183383 11342 Hs.12333 NM_007282 ENSG00000082996 RNF13 EIEE73|RZF ring finger protein 13 protein-coding chr12-4478 chr12 17537449 17537659 + 7.66 0.000 Intergenic PRIMA41-int|LTR|ERV1 51524 NR_146522 105369678 NR_146522 LINC02378 - long intergenic non-protein coding RNA 2378 ncRNA chr5-3052 chr5 26642943 26643153 + 7.66 0.000 Intergenic AluJb|SINE|Alu 395538 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr6-6923 chr6 14633528 14633738 + 7.66 0.000 Intergenic Intergenic -348179 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr5-8968 chr5 160748656 160748866 + 7.66 0.000 intron (NM_001366652, intron 2 of 24) intron (NM_001366652, intron 2 of 24) -63370 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr17-3566 chr17 79164925 79165135 + 7.66 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 90093 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr19-6320 chr19 10270433 10270643 + 7.66 0.000 promoter-TSS (NM_000201) promoter-TSS (NM_000201) -582 NM_000201 3383 Hs.643447 NM_000201 ENSG00000090339 ICAM1 BB2|CD54|P3.58 intercellular adhesion molecule 1 protein-coding chr9-4277 chr9 107489697 107489907 + 7.66 0.000 promoter-TSS (NM_004235) promoter-TSS (NM_004235) -33 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr9-4626 chr9 110705556 110705766 + 7.66 0.000 intron (NM_001166281, intron 5 of 11) intron (NM_001166281, intron 5 of 11) -22601 NM_001369398 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr14-1928 chr14 21170109 21170319 + 7.66 0.000 Intergenic L1PREC2|LINE|L1 -14151 NM_001004731 390445 Hs.553768 NM_001004731 ENSG00000169327 OR5AU1 OR14-38 olfactory receptor family 5 subfamily AU member 1 protein-coding chr12-6390 chr12 71115727 71115937 + 7.66 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 41977 NM_001369760 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr7-6950 chr7 96650706 96650916 + 7.66 0.000 intron (NR_038948, intron 2 of 4) intron (NR_038948, intron 2 of 4) 13527 NR_038948 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr2-8737 chr2 159983307 159983517 + 7.66 0.000 intron (NM_001007267, intron 13 of 26) intron (NM_001007267, intron 13 of 26) -78656 NM_001198759 100526664 Hs.153563 NM_001198759 ENSG00000248672 LY75-CD302 CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6 LY75-CD302 readthrough protein-coding chr1-6161 chr1 182669418 182669628 + 7.66 0.000 intron (NM_033345, intron 2 of 5) intron (NM_033345, intron 2 of 5) 2401 NM_001369564 85397 Hs.20982 NM_033345 ENSG00000135824 RGS8 - regulator of G protein signaling 8 protein-coding chr18-709 chr18 8608789 8608999 + 7.66 0.000 promoter-TSS (NM_001025300) promoter-TSS (NM_001025300) -551 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr12-4069 chr12 53463364 53463574 + 7.66 0.000 promoter-TSS (NR_109828) promoter-TSS (NR_109828) -999 NR_109828 102157401 NR_109828 ENSG00000282977 PCBP2-OT1 TUC.338|TUC338|uc.338 PCBP2 overlapping transcript 1 ncRNA chr3-10423 chr3 131020193 131020403 + 7.66 0.000 intron (NM_014065, intron 3 of 5) intron (NM_014065, intron 3 of 5) 6556 NM_001288950 28990 Hs.100878 NM_014065 ENSG00000034533 ASTE1 HT001 asteroid homolog 1 protein-coding chr1-9134 chr1 18668540 18668750 + 7.66 0.000 intron (NM_001135254, intron 4 of 8) AluJr|SINE|Alu 37799 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr2-5384 chr2 101475783 101475993 + 7.66 0.000 promoter-TSS (NM_001145664) promoter-TSS (NM_001145664) -776 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr19-4215 chr19 47097114 47097324 + 7.66 0.000 intron (NM_015168, intron 2 of 14) intron (NM_015168, intron 2 of 14) 16557 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chr9-5906 chr9 132575165 132575375 + 7.66 0.000 Intergenic Intergenic -7336 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr22-2780 chr22 41570259 41570469 + 7.66 0.000 intron (NM_014460, intron 1 of 3) intron (NM_014460, intron 1 of 3) 9354 NM_014460 27254 Hs.310893 NM_014460 ENSG00000172346 CSDC2 PIPPIN|dJ347H13.2 cold shock domain containing C2 protein-coding chr13-2705 chr13 92656786 92656996 + 7.66 0.000 intron (NM_004466, intron 7 of 7) AluJr|SINE|Alu 63064 NR_049776 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA chr14-2579 chr14 44395472 44395682 + 7.66 0.000 Intergenic Intergenic 111706 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr11-9185 chr11 36185722 36185932 + 7.66 0.000 intron (NM_001304264, intron 4 of 5) intron (NM_001304264, intron 4 of 5) 103597 NM_001307932 29099 Hs.99443 NM_014186 ENSG00000110442 COMMD9 C11orf55|HSPC166|LINC00610 COMM domain containing 9 protein-coding chr1-11859 chr1 37303420 37303630 + 7.66 0.000 Intergenic Intergenic 141962 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr22-3664 chr22 22896065 22896275 + 7.66 0.000 TTS (NM_001178126) TTS (NM_001178126) 8354 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr2-10159 chr2 82642421 82642631 + 7.66 0.000 Intergenic L1PA11|LINE|L1 -214277 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr8-4655 chr8 135665781 135665991 + 7.66 0.000 Intergenic Intergenic 208430 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr22-4276 chr22 49326629 49326839 + 7.66 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 216732 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr10-3075 chr10 5629929 5630139 + 7.66 0.000 Intergenic MER91C|DNA|hAT-Tip100 -33916 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr3-4255 chr3 144523699 144523909 + 7.66 0.000 Intergenic Intergenic 550723 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr13-2111 chr13 88000637 88000847 + 7.66 0.000 Intergenic L1P4b|LINE|L1 -142125 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr3-6612 chr3 126447050 126447260 + 7.66 0.000 intron (NR_104249, intron 6 of 8) intron (NR_104249, intron 6 of 8) 28736 NR_104249 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr9-5405 chr9 94555815 94556025 + 7.66 0.000 intron (NR_121567, intron 1 of 2) REP522|Satellite|telo 875 NR_121566 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr1-3542 chr1 221458391 221458601 + 7.66 0.000 Intergenic Intergenic -122200 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr11-5654 chr11 125138419 125138629 + 7.66 0.000 Intergenic Intergenic 26085 NR_125759 103695364 Hs.576940 NR_125759 ENSG00000254880 PKNOX2-AS1 - PKNOX2 antisense RNA 1 (head to head) ncRNA chr2-13568 chr2 155363349 155363559 + 7.66 0.000 Intergenic MER50|LTR|ERV1 664759 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr4-6244 chr4 66897650 66897860 + 7.66 0.000 Intergenic AluYm1|SINE|Alu 524245 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr11-6808 chr11 92505384 92505594 + 7.66 0.000 intron (NM_001008781, intron 1 of 24) intron (NM_001008781, intron 1 of 24) 153393 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr6-4554 chr6 41454971 41455181 + 7.66 0.000 Intergenic Intergenic -47368 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr11-7912 chr11 298751 298961 + 7.66 0.000 intron (NM_001025295, intron 1 of 1) intron (NM_001025295, intron 1 of 1) 670 NM_001025295 387733 Hs.443469 NM_001025295 ENSG00000206013 IFITM5 BRIL|DSPA1|Hrmp1|OI5|fragilis4 interferon induced transmembrane protein 5 protein-coding chr11-3722 chr11 16981715 16981925 + 7.66 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) 32594 NM_001329630 144100 Hs.12332 NM_175058 ENSG00000166689 PLEKHA7 - pleckstrin homology domain containing A7 protein-coding chr10-6595 chr10 84778812 84779022 + 7.66 0.000 Intergenic L1PA3|LINE|L1 353748 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr10-6329 chr10 118328333 118328543 + 7.66 0.000 intron (NM_022063, intron 6 of 8) MER5A|DNA|hAT-Charlie 13886 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr15-5287 chr15 101061992 101062202 + 7.66 0.000 intron (NM_024652, intron 30 of 33) intron (NM_024652, intron 30 of 33) 142740 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr10-8905 chr10 114709008 114709218 + 7.66 0.000 intron (NM_001322886, intron 1 of 20) Arthur1B|DNA|hAT-Tip100 -24110 NM_001322882 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr6-7287 chr6 43622709 43622919 + 7.66 0.000 intron (NM_019096, intron 9 of 11) intron (NM_019096, intron 9 of 11) 4539 NM_001286216 54676 Hs.485449 NM_019096 ENSG00000172432 GTPBP2 JABELS GTP binding protein 2 protein-coding chr5-2612 chr5 139692558 139692768 + 7.66 0.000 Intergenic Intergenic 17220 NM_001317211 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr4-5344 chr4 183945011 183945221 + 7.66 0.000 intron (NM_020225, intron 1 of 3) intron (NM_020225, intron 1 of 3) 39809 NM_020225 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr6-6888 chr6 11932296 11932506 + 7.66 0.000 Intergenic L1MA1|LINE|L1 68843 NR_125853 101928253 Hs.128163 NR_125853 LOC101928253 - uncharacterized LOC101928253 ncRNA chr18-2463 chr18 40837751 40837961 + 7.66 0.000 Intergenic Intergenic 682821 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr2-3909 chr2 47534975 47535185 + 7.54 0.000 intron (NM_022055, intron 1 of 1) intron (NM_022055, intron 1 of 1) 7543 NR_120602 644093 Hs.734158 NR_120602 ENSG00000235760 HCG2040054 - uncharacterized LOC644093 ncRNA chr1-14347 chr1 40808653 40808863 + 7.54 0.000 intron (NM_004700, intron 1 of 13) L2|LINE|L2 24971 NM_172163 9132 Hs.473058 NM_004700 ENSG00000117013 KCNQ4 DFNA2|DFNA2A|KV7.4 potassium voltage-gated channel subfamily Q member 4 protein-coding chr6-5674 chr6 106697360 106697570 + 7.54 0.000 intron (NR_149100, intron 2 of 2) intron (NR_149100, intron 2 of 2) 1980 NR_149100 105377926 Hs.635821 NR_149100 ENSG00000229654 LINC02526 - long intergenic non-protein coding RNA 2526 ncRNA chr18-3463 chr18 69142587 69142797 + 7.54 0.000 Intergenic Intergenic -258196 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr9-7665 chr9 69195792 69196002 + 7.54 0.000 intron (NM_001369871, intron 3 of 24) intron (NM_001369871, intron 3 of 24) -9114 NM_001170415 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr7-9218 chr7 117686608 117686818 + 7.54 0.000 Intergenic MSTD|LTR|ERVL-MaLR -122037 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr15-2356 chr15 39504826 39505036 + 7.54 0.000 Intergenic Intergenic -76148 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr5-8812 chr5 149923903 149924113 + 7.54 0.000 intron (NM_000440, intron 4 of 21) intron (NM_000440, intron 4 of 21) 8969 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr4-8160 chr4 129167923 129168133 + 7.54 0.000 Intergenic LTR9A1|LTR|ERV1 71876 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr7-5710 chr7 70320148 70320358 + 7.54 0.000 intron (NM_015570, intron 4 of 18) intron (NM_015570, intron 4 of 18) 721778 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr21-1233 chr21 45573870 45574080 + 7.54 0.000 Intergenic Intergenic -10950 NM_001352511 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr7-2615 chr7 602504 602714 + 7.54 0.000 promoter-TSS (NR_110054) promoter-TSS (NR_110054) -236 NR_110054 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr2-7648 chr2 28231475 28231685 + 7.54 0.000 intron (NM_199193, intron 8 of 13) intron (NM_199193, intron 8 of 13) -24619 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr7-3399 chr7 130140838 130141048 + 7.54 0.000 promoter-TSS (NR_149033) promoter-TSS (NR_149033) -788 NR_149034 100128325 Hs.105944 NR_149033 ENSG00000229196 LOC100128325 - uncharacterized LOC100128325 ncRNA chr4-8404 chr4 152021997 152022207 + 7.54 0.000 Intergenic Intergenic -78651 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr2-5849 chr2 237865240 237865450 + 7.54 0.000 intron (NM_005855, intron 1 of 2) G-rich|Low_complexity|Low_complexity 5722 NM_001308353 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr11-8806 chr11 11409232 11409442 + 7.54 0.000 intron (NM_001363464, intron 3 of 9) intron (NM_001363464, intron 3 of 9) -56087 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr14-4739 chr14 61476977 61477187 + 7.54 0.000 intron (NM_006255, intron 9 of 13) intron (NM_006255, intron 9 of 13) 93112 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr17-4813 chr17 51338143 51338353 + 7.54 0.000 intron (NR_122104, intron 1 of 2) intron (NR_122104, intron 1 of 2) 1533 NR_122104 440446 Hs.626751 NR_122104 ENSG00000267452 LINC02072 - long intergenic non-protein coding RNA 2072 ncRNA chr1-15791 chr1 176206037 176206247 + 7.54 0.000 intron (NM_022457, intron 1 of 19) intron (NM_022457, intron 1 of 19) 1102 NM_001286644 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr2-14719 chr2 238491552 238491762 + 7.54 0.000 Intergenic Intergenic 63842 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr6-2644 chr6 163943866 163944076 + 7.54 0.000 Intergenic Intergenic -272487 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr3-7056 chr3 175005527 175005737 + 7.54 0.000 intron (NM_207015, intron 1 of 13) intron (NM_207015, intron 1 of 13) 109610 NR_046390 100862679 Hs.148810 NR_046390 ENSG00000230292 NAALADL2-AS3 - NAALADL2 antisense RNA 3 ncRNA chr12-7445 chr12 62211615 62211825 + 7.54 0.000 Intergenic Intergenic -18881 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr5-4671 chr5 37823842 37824052 + 7.54 0.000 intron (NM_199231, intron 2 of 2) intron (NM_199231, intron 2 of 2) 10875 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr20-4215 chr20 47481793 47482003 + 7.54 0.000 Intergenic L2a|LINE|L2 -19989 NM_006534 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr15-4958 chr15 78821502 78821712 + 7.54 0.000 Intergenic Intergenic -10143 NM_014272 11173 Hs.16441 NM_014272 ENSG00000136378 ADAMTS7 ADAM-TS 7|ADAM-TS7|ADAMTS-7 ADAM metallopeptidase with thrombospondin type 1 motif 7 protein-coding chr22-1389 chr22 37728074 37728284 + 7.54 0.000 intron (NM_001039141, intron 7 of 23) AluSx3|SINE|Alu 17765 NR_160696 102724378 NR_160696 LOC102724378 - uncharacterized LOC102724378 ncRNA chr12-3358 chr12 93144422 93144632 + 7.54 0.000 intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -29839 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr4-2898 chr4 81557955 81558165 + 7.54 0.000 Intergenic Intergenic -86153 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr17-4271 chr17 64851883 64852093 + 7.54 0.000 Intergenic Intergenic -14804 NR_024386 440456 Hs.646585 NR_024386 PLEKHM1P1 PLEKHM1P pleckstrin homology and RUN domain containing M1 pseudogene 1 pseudo chr19-4897 chr19 41028749 41028959 + 7.54 0.000 Intergenic Intergenic 37572 NM_000767 1555 Hs.1360 NM_000767 ENSG00000197408 CYP2B6 CPB6|CYP2B|CYP2B7|CYP2B7P|CYPIIB6|EFVM|IIB1|P450 cytochrome P450 family 2 subfamily B member 6 protein-coding chr10-9058 chr10 124675569 124675779 + 7.54 0.000 intron (NM_014661, intron 4 of 4) MIRb|SINE|MIR -28354 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr9-6746 chr9 16172097 16172307 + 7.54 0.000 Intergenic Intergenic 80905 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr7-5318 chr7 26228366 26228576 + 7.54 0.000 Intergenic MER1B|DNA|hAT-Charlie 26726 NM_016587 11335 Hs.381189 NM_007276 ENSG00000122565 CBX3 HECH|HP1-GAMMA|HP1Hs-gamma chromobox 3 protein-coding chr4-6236 chr4 62959014 62959224 + 7.54 0.000 Intergenic L2a|LINE|L2 -797354 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr4-6958 chr4 19689781 19689991 + 7.54 0.000 Intergenic Intergenic -562019 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr5-8462 chr5 131915314 131915524 + 7.54 0.000 intron (NM_001303622, intron 7 of 12) intron (NM_001303622, intron 7 of 12) 30244 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chr9-4513 chr9 69269349 69269559 + 7.54 0.000 Intergenic ERVL-E-int|LTR|ERVL 37602 NR_047671 100885775 Hs.49768 NR_047671 ENSG00000278910 BANCR LINC00586 BRAF-activated non-protein coding RNA ncRNA chr1-10231 chr1 115727644 115727854 + 7.54 0.000 intron (NM_001232, intron 5 of 10) MER81|DNA|hAT-Blackjack 41056 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr14-4542 chr14 42628822 42629032 + 7.54 0.000 Intergenic MER89|LTR|ERV1 1022071 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-8752 chr1 246417436 246417646 + 7.54 0.000 promoter-TSS (NM_022743) promoter-TSS (NM_022743) -129 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr7-3618 chr7 36037520 36037730 + 7.54 0.000 Intergenic Intergenic -57685 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr6-3506 chr6 25011126 25011336 + 7.54 0.000 intron (NM_001286446, intron 1 of 13) intron (NM_001286446, intron 1 of 13) 31057 NM_001286446 9750 Hs.559459 NM_014722 ENSG00000111913 RIPOR2 C6orf32|DFNB104|DIFF40|DIFF48|FAM65B|MYONAP|PL48 RHO family interacting cell polarization regulator 2 protein-coding chr4-7038 chr4 27268193 27268403 + 7.54 0.000 intron (NR_125921, intron 3 of 5) MIR|SINE|MIR 50819 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr9-8524 chr9 126090682 126090892 + 7.54 0.000 Intergenic Intergenic 185128 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr21-1624 chr21 20781072 20781282 + 7.54 0.000 intron (NR_109786, intron 4 of 7) MER61-int|LTR|ERV1 21931 NR_109786 387486 Hs.576551 NR_024090 ENSG00000224924 LINC00320 C21orf131|NCRNA00320|PRED14 long intergenic non-protein coding RNA 320 ncRNA chr5-5162 chr5 109161801 109162011 + 7.54 0.000 intron (NR_146155, intron 17 of 19) L1PA13|LINE|L1 164463 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr2-3934 chr2 60785494 60785704 + 7.54 0.000 intron (NM_022894, intron 13 of 21) AluJr|SINE|Alu 29331 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr12-4668 chr12 47366248 47366458 + 7.54 0.000 Intergenic MER41B|LTR|ERV1 -2084 NR_039715 100616478 NR_039715 ENSG00000264906 MIR4494 - microRNA 4494 ncRNA chr2-10994 chr2 99895555 99895765 + 7.54 0.000 intron (NM_001025108, intron 6 of 23) intron (NM_001025108, intron 6 of 23) 209923 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr10-7259 chr10 126253419 126253629 + 7.54 0.000 intron (NM_001288974, intron 3 of 18) intron (NM_001288974, intron 3 of 18) 134953 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr1-8461 chr1 111714974 111715184 + 7.54 0.000 3' UTR (NM_001010935, exon 9 of 9) 3' UTR (NM_001010935, exon 9 of 9) 24316 NM_019099 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr1-10487 chr1 164570049 164570259 + 7.54 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 10432 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr1-15389 chr1 151140263 151140473 + 7.54 0.000 intron (NM_030913, intron 3 of 18) MIRb|SINE|MIR 6263 NM_001178062 10500 Hs.516316 NM_030913 ENSG00000143434 SEMA6C SEMAY|m-SemaY|m-SemaY2 semaphorin 6C protein-coding chrX-2440 chrX 80148872 80149082 + 7.54 0.000 Intergenic MER61E|LTR|ERV1 125917 NM_001303475 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr16-2974 chr16 12429512 12429722 + 7.54 0.000 intron (NM_032167, intron 18 of 20) intron (NM_032167, intron 18 of 20) -290704 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr17-4351 chr17 6948631 6948841 + 7.54 0.000 Intergenic LTR33A|LTR|ERVL -47313 NM_000697 239 Hs.654431 NM_000697 ENSG00000108839 ALOX12 12-LOX|12S-LOX|LOG12 arachidonate 12-lipoxygenase, 12S type protein-coding chr19-4663 chr19 16619628 16619838 + 7.54 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) 8471 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr18-1961 chr18 37327078 37327288 + 7.54 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 52723 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr18-2544 chr18 791444 791654 + 7.54 0.000 intron (NM_005433, intron 1 of 11) intron (NM_005433, intron 1 of 11) 20693 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr8-6139 chr8 30186629 30186839 + 7.54 0.000 Intergenic MER21C|LTR|ERVL 30365 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr7-4925 chr7 132472652 132472862 + 7.54 0.000 intron (NM_001105543, intron 3 of 3) intron (NM_001105543, intron 3 of 3) 103713 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr19-2070 chr19 18097695 18097905 + 7.54 0.000 promoter-TSS (NM_015016) promoter-TSS (NM_015016) 22 NM_015016 23031 Hs.466184 NM_015016 ENSG00000099308 MAST3 - microtubule associated serine/threonine kinase 3 protein-coding chr4-5813 chr4 93513938 93514148 + 7.54 0.000 intron (NM_001286838, intron 11 of 14) intron (NM_001286838, intron 11 of 14) -314710 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr8-6476 chr8 62532117 62532327 + 7.54 0.000 intron (NM_001304533, intron 1 of 6) intron (NM_001304533, intron 1 of 6) 283368 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr7-2175 chr7 74400149 74400359 + 7.54 0.000 intron (NM_032421, intron 13 of 15) intron (NM_032421, intron 13 of 15) -53652 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr2-14364 chr2 218971139 218971349 + 7.54 0.000 Intergenic Intergenic -5040 NR_024385 151300 Hs.420716 NR_015390 LINC00608 - long intergenic non-protein coding RNA 608 ncRNA chr12-5151 chr12 100698596 100698806 + 7.54 0.000 Intergenic Intergenic -96075 NM_001286615 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr22-3459 chr22 42606909 42607119 + 7.54 0.000 intron (NR_103820, intron 1 of 8) AluJb|SINE|Alu 7869 NR_103820 84271 Hs.505802 NM_032311 ENSG00000100227 POLDIP3 PDIP3|PDIP46|SKAR DNA polymerase delta interacting protein 3 protein-coding chr10-4897 chr10 20096394 20096604 + 7.54 0.000 intron (NM_032812, intron 4 of 13) intron (NM_032812, intron 4 of 13) 280067 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr15-4592 chr15 60041448 60041658 + 7.54 0.000 Intergenic Intergenic 37242 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr17-7768 chr17 35643793 35644003 + 7.54 0.000 intron (NM_001030006, intron 12 of 21) L4_B_Mam|LINE|RTE-X 56576 NM_001282 163 Hs.514819 NM_001282 ENSG00000006125 AP2B1 ADTB2|AP105B|AP2-BETA|CLAPB1 adaptor related protein complex 2 subunit beta 1 protein-coding chr4-3874 chr4 139395285 139395495 + 7.54 0.000 Intergenic Intergenic 58651 NR_159964 107984036 Hs.605782 NR_159963 LOC107984036 - uncharacterized LOC107984036 ncRNA chr10-6473 chr10 37701959 37702169 + 7.54 0.000 Intergenic Intergenic 93111 NR_051997 100419868 Hs.741719 NR_051997 ZNF33BP1 - zinc finger protein 33B pseudogene 1 pseudo chrX-3565 chrX 70574969 70575179 + 7.54 0.000 intron (NM_001003811, intron 26 of 30) L2a|LINE|L2 -119080 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr9-5816 chr9 129289070 129289280 + 7.54 0.000 Intergenic Intergenic 6759 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr21-1228 chr21 45481805 45482015 + 7.54 0.000 intron (NM_130445, intron 13 of 42) intron (NM_130445, intron 13 of 42) 3644 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr8-5498 chr8 55406830 55407040 + 7.54 0.000 intron (NM_052898, intron 2 of 2) intron (NM_052898, intron 2 of 2) 48386 NR_027765 100133234 Hs.729852 NR_027765 ENSG00000248522 SBF1P1 - SET binding factor 1 pseudogene 1 pseudo chr4-2917 chr4 88158496 88158706 + 7.54 0.000 promoter-TSS (NM_004827) promoter-TSS (NM_004827) 38 NM_004827 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr6-2817 chr6 157832474 157832684 + 7.54 0.000 intron (NM_016224, intron 1 of 17) THE1C|LTR|ERVL-MaLR 9333 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr15-5150 chr15 91150703 91150913 + 7.54 0.000 intron (NM_001323040, intron 2 of 12) intron (NM_001323040, intron 2 of 12) 49012 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr10-5019 chr10 33643195 33643405 + 7.54 0.000 Intergenic Intergenic 129380 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr2-11263 chr2 176817427 176817637 + 7.54 0.000 Intergenic Intergenic 179778 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr2-11727 chr2 10494187 10494397 + 7.54 0.000 Intergenic MIR3|SINE|MIR 44564 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chrX-1678 chrX 3047560 3047770 + 7.54 0.000 intron (NM_001201539, intron 1 of 10) MER4B-int|LTR|ERV1 6194 NM_001201539 416 Hs.101674 NM_004042 ENSG00000062096 ARSF ASF arylsulfatase F protein-coding chr16-6883 chr16 84295702 84295912 + 7.54 0.000 intron (NM_001282467, intron 1 of 6) MIR|SINE|MIR 929 NM_001282467 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr4-4931 chr4 124507166 124507376 + 7.54 0.000 intron (NR_110838, intron 7 of 8) L1MB7|LINE|L1 51163 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr11-10568 chr11 122249009 122249219 + 7.54 0.000 intron (NR_137180, intron 2 of 4) L2a|LINE|L2 -46005 NR_137182 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr21-1546 chr21 5240363 5240573 + 7.54 0.000 Intergenic Intergenic -85810 NM_005049 5822 Hs.449076 NM_005049 ENSG00000241945 PWP2 EHOC-17|PWP2H|UTP1 PWP2 small subunit processome component protein-coding chr5-6032 chr5 164433559 164433769 + 7.54 0.000 Intergenic Intergenic 33738 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr4-3456 chr4 101559832 101560042 + 7.54 0.000 Intergenic Intergenic 212160 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr1-8097 chr1 7017110 7017320 + 7.54 0.000 intron (NM_001349608, intron 2 of 21) MIR3|SINE|MIR 231761 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr7-5791 chr7 78774893 78775103 + 7.54 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -233990 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr8-4399 chr8 105325112 105325322 + 7.54 0.000 intron (NM_001362837, intron 1 of 7) intron (NM_001362837, intron 1 of 7) 5674 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr4-5112 chr4 149491672 149491882 + 7.54 0.000 intron (NM_001363507, intron 12 of 13) L1MA8|LINE|L1 324066 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr12-6181 chr12 14565918 14566128 + 7.54 0.000 intron (NM_024829, intron 1 of 10) intron (NM_024829, intron 1 of 10) -1709 NR_120465 101928290 Hs.131933 NR_120465 ENSG00000256751 PLBD1-AS1 - PLBD1 antisense RNA 1 ncRNA chr1-12763 chr1 72080998 72081208 + 7.54 0.000 intron (NM_173808, intron 1 of 6) intron (NM_173808, intron 1 of 6) 201436 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr14-2628 chr14 64135748 64135958 + 7.54 0.000 intron (NM_015180, intron 78 of 114) intron (NM_015180, intron 78 of 114) -40728 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA chr8-4275 chr8 94702073 94702283 + 7.54 0.000 intron (NM_017697, intron 15 of 15) AluY|SINE|Alu -17722 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr2-8200 chr2 91741623 91741833 + 7.54 0.000 Intergenic Intergenic -33614 NR_003503 645367 Hs.650223 NR_003503 GGT8P GGT1P1 gamma-glutamyltransferase 8 pseudogene pseudo chrX-4020 chrX 17111374 17111584 + 7.54 0.000 intron (NM_001080975, intron 14 of 17) intron (NM_001080975, intron 14 of 17) 164821 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr5-7294 chr5 14424334 14424544 + 7.54 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -39544 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr18-1966 chr18 37833359 37833569 + 7.54 0.000 Intergenic L1ME3C|LINE|L1 176329 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr1-14989 chr1 90559923 90560133 + 7.54 0.000 Intergenic MIRc|SINE|MIR -97722 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chrX-3570 chrX 71972583 71972793 + 7.54 0.000 intron (NM_001013627, intron 1 of 7) L1MB8|LINE|L1 61600 NM_001013627 340527 Hs.397836 NM_001013627 ENSG00000204131 NHSL2 - NHS like 2 protein-coding chrX-1933 chrX 155281637 155281847 + 7.54 0.000 intron (NM_001289, intron 3 of 5) L2|LINE|L2 -17251 NM_171998 116442 Hs.632832 NM_171998 ENSG00000155961 RAB39B BGMR|MRX72|WSMN|WSN RAB39B, member RAS oncogene family protein-coding chr10-2096 chr10 123573233 123573443 + 7.54 0.000 Intergenic Intergenic -93017 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr6-5392 chr6 152895948 152896158 + 7.54 0.000 Intergenic Intergenic 86988 NM_012177 26271 Hs.520506 NM_012177 ENSG00000112029 FBXO5 EMI1|FBX5|Fbxo31 F-box protein 5 protein-coding chr6-6937 chr6 15781920 15782130 + 7.54 0.000 Intergenic Intergenic -118967 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr5-7438 chr5 31066299 31066509 + 7.54 0.000 Intergenic MLT1E|LTR|ERVL-MaLR -127282 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr17-4615 chr17 6557231 6557441 + 7.54 0.000 promoter-TSS (NM_001165966) promoter-TSS (NM_001165966) -781 NM_031220 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr5-4943 chr5 76266863 76267073 + 7.54 0.000 intron (NM_014979, intron 4 of 12) intron (NM_014979, intron 4 of 12) -136317 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr4-5100 chr4 148069875 148070085 + 7.54 0.000 intron (NM_024605, intron 22 of 22) intron (NM_024605, intron 22 of 22) 287385 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr9-5309 chr9 86246918 86247128 + 7.54 0.000 intron (NM_001276367, intron 1 of 4) intron (NM_001276367, intron 1 of 4) 9010 NM_001276368 389766 Hs.632073 NM_001010907 ENSG00000187753 C9orf153 bA507D14.1 chromosome 9 open reading frame 153 protein-coding chr3-6530 chr3 116929759 116929969 + 7.54 0.000 intron (NR_121607, intron 1 of 1) intron (NR_121607, intron 1 of 1) 8433 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr17-6082 chr17 80340938 80341148 + 7.54 0.000 intron (NM_001256071, intron 26 of 67) AluSc8|SINE|Alu -74124 NM_001164637 284131 Hs.389678 NM_173627 ENSG00000173818 ENDOV - endonuclease V protein-coding chr3-6144 chr3 56902770 56902980 + 7.54 0.000 intron (NM_001128615, intron 3 of 12) intron (NM_001128615, intron 3 of 12) 13561 NM_001289698 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr9-5057 chr9 33101839 33102049 + 7.54 0.000 Intergenic Intergenic -6748 NR_162131 113219452 NR_162131 MIR12117 - microRNA 12117 ncRNA chr1-8550 chr1 163586205 163586415 + 7.54 0.000 Intergenic Intergenic -163119 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr15-3651 chr15 89863760 89863970 + 7.54 0.000 intron (NR_023361, intron 5 of 6) intron (NR_023361, intron 5 of 6) -13144 NR_049817 100847059 NR_049817 ENSG00000264966 MIR5094 - microRNA 5094 ncRNA chr4-7633 chr4 83155068 83155278 + 7.54 0.000 Intergenic Intergenic -40444 NM_001130715 51316 Hs.546392 NM_016619 ENSG00000145287 PLAC8 C15|DGIC|PNAS-144|onzin placenta associated 8 protein-coding chr4-2319 chr4 121256327 121256537 + 7.54 0.000 Intergenic Intergenic -28949 NM_001244764 79931 Hs.208206 NM_024873 ENSG00000050730 TNIP3 ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding chr1-9613 chr1 45759007 45759217 + 7.54 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -8299 NM_001145349 3652 Hs.744252 NM_005897 ENSG00000197429 IPP KLHL27 intracisternal A particle-promoted polypeptide protein-coding chr3-5522 chr3 196879338 196879548 + 7.54 0.000 intron (NM_152699, intron 1 of 9) HAL1|LINE|L1 11523 NM_152699 205564 Hs.240770 NM_152699 ENSG00000119231 SENP5 - SUMO specific peptidase 5 protein-coding chr5-2801 chr5 8417433 8417643 + 7.54 0.000 intron (NR_039984, intron 2 of 5) L1MC4|LINE|L1 40026 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr4-8442 chr4 154667653 154667863 + 7.54 0.000 Intergenic Intergenic -54950 NM_000509 2266 Hs.727584 NM_000509 ENSG00000171557 FGG - fibrinogen gamma chain protein-coding chr20-4055 chr20 37823361 37823571 + 7.54 0.000 intron (NM_001281495, intron 12 of 16) intron (NM_001281495, intron 12 of 16) -79661 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr2-10064 chr2 41116350 41116560 + 7.54 0.000 Intergenic Intergenic -604020 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr1-15806 chr1 177377157 177377367 + 7.54 0.000 Intergenic Intergenic 25676 NR_126001 102724661 Hs.146628 NR_126001 LINC01645 - long intergenic non-protein coding RNA 1645 ncRNA chr16-4220 chr16 13970694 13970904 + 7.54 0.000 Intergenic L1MA3|LINE|L1 45219 NR_110909 101927311 NR_110909 ENSG00000262097 LINC02185 - long intergenic non-protein coding RNA 2185 ncRNA chr4-6497 chr4 154908591 154908801 + 7.54 0.000 Intergenic Intergenic 127191 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr6-4787 chr6 76641178 76641388 + 7.54 0.000 Intergenic LTR33|LTR|ERVL -47660 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr5-3906 chr5 160054092 160054302 + 7.54 0.000 intron (NM_003314, intron 7 of 7) intron (NM_003314, intron 7 of 7) 45058 NM_003314 7265 Hs.519718 NM_003314 ENSG00000113312 TTC1 TPR1 tetratricopeptide repeat domain 1 protein-coding chr3-6548 chr3 119815411 119815621 + 7.54 0.000 intron (NM_033013, intron 7 of 8) intron (NM_033013, intron 7 of 8) 32806 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding chr14-4389 chr14 29160424 29160634 + 7.54 0.000 Intergenic Intergenic -374742 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr6-5984 chr6 91648525 91648735 + 7.54 0.000 intron (NR_104154, intron 2 of 3) intron (NR_104154, intron 2 of 3) 41798 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr9-4966 chr9 17935334 17935544 + 7.54 0.000 Intergenic L2|LINE|L2 356373 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr21-867 chr21 37877335 37877545 + 7.54 0.000 intron (NM_002240, intron 1 of 3) intron (NM_002240, intron 1 of 3) 39017 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr4-1706 chr4 173168732 173168942 + 7.54 0.000 promoter-TSS (NM_017423) promoter-TSS (NM_017423) 26 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr10-3662 chr10 100989553 100989763 + 7.54 0.000 exon (NM_001163812, exon 2 of 5) exon (NM_001163812, exon 2 of 5) 2115 NR_160740 56652 Hs.22678 NM_021830 ENSG00000107815 TWNK ATXN8|C10orf2|IOSCA|MTDPS7|PEO|PEO1|PEOA3|PRLTS5|SANDO|SCA8|TWINL twinkle mtDNA helicase protein-coding chr6-7793 chr6 97921710 97921920 + 7.54 0.000 Intergenic Intergenic -102716 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr14-4346 chr14 23369353 23369563 + 7.54 0.000 Intergenic Intergenic -3351 NM_172314 64806 Hs.302036 NM_022789 ENSG00000166090 IL25 IL17E interleukin 25 protein-coding chr10-3779 chr10 125416050 125416260 + 7.54 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -158216 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr19-5364 chr19 6539753 6539963 + 7.54 0.000 Intergenic AluSz|SINE|Alu 8832 NM_003811 8744 Hs.1524 NM_003811 ENSG00000125657 TNFSF9 4-1BB-L|CD137L|TNLG5A TNF superfamily member 9 protein-coding chr6-4697 chr6 55919672 55919882 + 7.54 0.000 Intergenic Intergenic -44187 NM_021073 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr9-6113 chr9 3612527 3612737 + 7.54 0.000 Intergenic L1M1|LINE|L1 -55454 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chrX-4115 chrX 25233576 25233786 + 7.54 0.000 Intergenic AluSx3|SINE|Alu -217716 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr8-5517 chr8 63297125 63297335 + 7.54 0.000 Intergenic MamGypLTR1c|LTR|Gypsy 128227 NM_001277818 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 - YTH N6-methyladenosine RNA binding protein 3 protein-coding chr7-5113 chr7 4179111 4179321 + 7.54 0.000 intron (NM_001079653, intron 9 of 19) intron (NM_001079653, intron 9 of 19) -44379 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr10-8664 chr10 100548118 100548328 + 7.54 0.000 3' UTR (NM_017902, exon 8 of 8) 3' UTR (NM_017902, exon 8 of 8) 12280 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr7-9720 chr7 156713991 156714201 + 7.54 0.000 intron (NR_146958, intron 13 of 14) intron (NR_146958, intron 13 of 14) 70295 NM_001308274 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chrX-2757 chrX 129790792 129791002 + 7.54 0.000 intron (NM_018990, intron 3 of 7) intron (NM_018990, intron 3 of 7) 10948 NM_018990 54440 Hs.61469 NM_018990 ENSG00000122122 SASH3 753P9|CXorf9|HACS2|SH3D6C|SLY SAM and SH3 domain containing 3 protein-coding chr2-11648 chr2 6349766 6349976 + 7.54 0.000 Intergenic Intergenic 25551 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr1-12163 chr1 182378080 182378290 + 7.54 0.000 TTS (NM_002065) TTS (NM_002065) 13219 NM_001033056 2752 Hs.132016 NM_002065 ENSG00000135821 GLUL GLNS|GS|PIG43|PIG59 glutamate-ammonia ligase protein-coding chr3-8649 chr3 176849339 176849549 + 7.54 0.000 Intergenic L2b|LINE|L2 -32443 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chrX-5319 chrX 144939174 144939384 + 7.54 0.000 Intergenic MER52D|LTR|ERV1 -308224 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr16-2744 chr16 1080198 1080408 + 7.54 0.000 3' UTR (NM_001172560, exon 2 of 2) 3' UTR (NM_001172560, exon 2 of 2) 1477 NM_001053 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr3-8641 chr3 172929010 172929220 + 7.54 0.000 intron (NM_031955, intron 6 of 10) intron (NM_031955, intron 6 of 10) 178113 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr9-5542 chr9 109302221 109302431 + 7.54 0.000 intron (NM_019114, intron 1 of 25) MLT1B|LTR|ERVL-MaLR 18638 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr1-15560 chr1 158873049 158873259 + 7.54 0.000 Intergenic MLT2B3|LTR|ERVL 41803 NM_002432 4332 Hs.153837 NM_002432 ENSG00000163563 MNDA PYHIN3 myeloid cell nuclear differentiation antigen protein-coding chr11-10599 chr11 124190507 124190717 + 7.54 0.000 Intergenic LTR19B|LTR|ERV1 5396 NM_001355213 26497 Hs.538726 NM_001355213 ENSG00000197309 OR10D3 HTPCRX09|OR10D3P olfactory receptor family 10 subfamily D member 3 (putative) protein-coding chr6-3805 chr6 28053372 28053582 + 7.54 0.000 Intergenic Intergenic -19839 NM_001355425 442179 NM_001355425 OR1F12 OR1F12P|OR1F12Q|OR6-12|hs6M1-35P olfactory receptor family 1 subfamily F member 12 protein-coding chr5-4380 chr5 175638060 175638270 + 7.54 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -19906 NR_160284 3274 Hs.247885 NM_022304 ENSG00000113749 HRH2 H2R|HH2R histamine receptor H2 protein-coding chr9-8506 chr9 124907208 124907418 + 7.54 0.000 intron (NM_002077, intron 12 of 22) L1M5|LINE|L1 33770 NM_002077 2800 Hs.59504 NM_002077 ENSG00000136935 GOLGA1 golgin-97 golgin A1 protein-coding chr12-8182 chr12 122359786 122359996 + 7.54 0.000 intron (NM_198240, intron 5 of 23) intron (NM_198240, intron 5 of 23) -35651 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chr1-16071 chr1 202380246 202380456 + 7.54 0.000 intron (NM_002481, intron 1 of 23) intron (NM_002481, intron 1 of 23) 31649 NM_001167857 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr17-2990 chr17 70361210 70361420 + 7.54 0.000 Intergenic Intergenic 191780 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr16-3601 chr16 75927229 75927439 + 7.54 0.000 Intergenic MIRc|SINE|MIR -200844 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr6-3692 chr6 162499193 162499403 + 7.54 0.000 intron (NM_004562, intron 1 of 11) L2c|LINE|L2 -227834 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr20-3302 chr20 11574921 11575131 + 7.54 0.000 Intergenic MER5A|DNA|hAT-Charlie 295689 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr11-2695 chr11 110430240 110430450 + 7.54 0.000 intron (NM_004109, intron 1 of 3) CpG 397 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chr1-9924 chr1 75450319 75450529 + 7.54 0.000 intron (NM_001320285, intron 2 of 25) L1PA16|LINE|L1 160690 NM_001320287 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr6-3791 chr6 24332340 24332550 + 7.54 0.000 intron (NM_016356, intron 2 of 9) MLT1G1|LTR|ERVL-MaLR -24458 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr8-3288 chr8 22943182 22943392 + 7.54 0.000 Intergenic AluJr|SINE|Alu -2210 NM_001363233 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr11-10285 chr11 104813724 104813934 + 7.54 0.000 Intergenic L2a|LINE|L2 84841 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr11-6047 chr11 30087892 30088102 + 7.54 0.000 Intergenic MIRb|SINE|MIR -70967 NM_002233 3739 Hs.592002 NM_002233 ENSG00000182255 KCNA4 HBK4|HK1|HPCN2|HUKII|KCNA4L|KCNA8|KV1.4|MCIDDS|PCN2 potassium voltage-gated channel subfamily A member 4 protein-coding chr13-3310 chr13 53209897 53210107 + 7.54 0.000 Intergenic L1MA9|LINE|L1 -58102 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr15-2012 chr15 47057766 47057976 + 7.54 0.000 Intergenic ERVL-E-int|LTR|ERVL -126218 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr12-6130 chr12 229324 229534 + 7.54 0.000 intron (NM_001190997, intron 5 of 12) intron (NM_001190997, intron 5 of 12) -15272 NM_001122848 6539 Hs.437174 NM_003044 ENSG00000111181 SLC6A12 BGT-1|BGT1|GAT2 solute carrier family 6 member 12 protein-coding chr17-4349 chr17 5286918 5287128 + 7.54 0.000 intron (NM_001291581, intron 1 of 16) L2a|LINE|L2 4739 NM_001291581 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr1-16248 chr1 211363629 211363839 + 7.54 0.000 intron (NM_001319207, intron 7 of 10) AluJb|SINE|Alu 17370 NM_145759 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr2-2789 chr2 12884734 12884944 + 7.54 0.000 Intergenic Intergenic 122174 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr9-5865 chr9 130936449 130936659 + 7.54 0.000 intron (NM_001145106, intron 2 of 7) intron (NM_001145106, intron 2 of 7) 2514 NM_001145106 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr6-5862 chr6 36759176 36759386 + 7.54 0.000 intron (NM_020939, intron 12 of 20) intron (NM_020939, intron 12 of 20) -1872 NM_001314018 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr6-4377 chr6 21946433 21946643 + 7.54 0.000 intron (NR_015410, intron 5 of 11) L1MEi|LINE|L1 200655 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr1-10593 chr1 176467146 176467356 + 7.54 0.000 intron (NM_021936, intron 1 of 4) Tigger3a|DNA|TcMar-Tigger 4076 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr20-2881 chr20 62886289 62886499 + 7.54 0.000 TTS (NM_080797) TTS (NM_080797) -3491 NR_145839 109623463 NR_145839 SNORA117 - small nucleolar RNA, H/ACA box 117 snoRNA chr3-8223 chr3 47693404 47693614 + 7.54 0.000 intron (NM_003074, intron 11 of 27) intron (NM_003074, intron 11 of 27) -31815 NR_145791 109623484 NR_145791 SNORD146 - small nucleolar RNA, C/D box 146 snoRNA chr1-11112 chr1 230868848 230869058 + 7.54 0.000 promoter-TSS (NM_032800) promoter-TSS (NM_032800) -397 NM_032800 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr8-5396 chr8 26783813 26784023 + 7.54 0.000 intron (NM_001322504, intron 1 of 1) L1PA11|LINE|L1 81737 NR_136343 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr10-3925 chr10 84088865 84089075 + 7.54 0.000 Intergenic Intergenic -50539 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr10-7257 chr10 125741032 125741242 + 7.54 0.000 exon (NM_015608, exon 16 of 24) exon (NM_015608, exon 16 of 24) 10923 NR_120633 101927983 Hs.634269 NR_120633 ENSG00000236991 EDRF1-AS1 - EDRF1 antisense RNA 1 ncRNA chr2-12618 chr2 72039842 72040052 + 7.54 0.000 Intergenic Intergenic 107915 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chrX-4234 chrX 38777800 38778010 + 7.54 0.000 Intergenic Intergenic -23527 NM_021242 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr5-8314 chr5 116723054 116723264 + 7.54 0.000 Intergenic Intergenic 39050 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chrX-3210 chrX 50930292 50930502 + 7.54 0.000 Intergenic Intergenic 19662 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr5-3796 chr5 79777558 79777768 + 7.54 0.000 intron (NM_153610, intron 9 of 12) AluSq2|SINE|Alu 87827 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr10-4456 chr10 73501071 73501281 + 7.54 0.000 intron (NR_135249, intron 20 of 21) intron (NR_135249, intron 20 of 21) -5152 NM_001142353 5532 Hs.500067 NM_021132 ENSG00000107758 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3 catalytic subunit beta protein-coding chr11-10668 chr11 127640203 127640413 + 7.54 0.000 Intergenic Intergenic 369238 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr13-3542 chr13 24007174 24007384 + 7.54 0.000 intron (NR_104595, intron 2 of 4) intron (NR_104595, intron 2 of 4) 27477 NR_104595 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr13-2192 chr13 20563160 20563370 + 7.54 0.000 Intergenic AluJr|SINE|Alu -3892 NR_148465 8100 Hs.187376 NM_006531 ENSG00000032742 IFT88 D13S1056E|DAF19|TG737|TTC10|hTg737 intraflagellar transport 88 protein-coding chr20-2278 chr20 3811311 3811521 + 7.54 0.000 intron (NR_109859, intron 2 of 3) intron (NR_109859, intron 2 of 3) 2922 NR_109859 101929125 Hs.744106 NR_109859 ENSG00000275491 LINC01730 - long intergenic non-protein coding RNA 1730 ncRNA chr4-5221 chr4 168035342 168035552 + 7.54 0.000 Intergenic L1MEf|LINE|L1 -57090 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr15-3800 chr15 70948265 70948475 + 7.54 0.000 intron (NM_017691, intron 8 of 15) intron (NM_017691, intron 8 of 15) 55927 NM_001363732 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr3-7946 chr3 157646620 157646830 + 7.54 0.000 Intergenic MER94|DNA|hAT-Blackjack 103381 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr2-13145 chr2 118573629 118573839 + 7.54 0.000 Intergenic Intergenic 29232 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr8-6054 chr8 24913973 24914183 + 7.54 0.000 promoter-TSS (NM_001105541) promoter-TSS (NM_001105541) 317 NM_005382 4741 Hs.458657 NM_005382 ENSG00000104722 NEFM NEF3|NF-M|NFM neurofilament medium protein-coding chr2-10126 chr2 65743667 65743877 + 7.54 0.000 Intergenic Intergenic -311173 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr7-7771 chr7 1715110 1715320 + 7.54 0.000 intron (NM_001128636, intron 2 of 2) L2a|LINE|L2 27095 NR_120509 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr17-4960 chr17 79200229 79200439 + 7.54 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 125397 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr10-4400 chr10 56009627 56009837 + 7.54 0.000 Intergenic Intergenic 351527 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr12-5126 chr12 98439557 98439767 + 7.54 0.000 Intergenic LTR78B|LTR|ERV1 17483 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr11-9059 chr11 29391462 29391672 + 7.54 0.000 Intergenic Intergenic -202846 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr3-10190 chr3 119398661 119398871 + 7.54 0.000 intron (NM_020754, intron 8 of 11) intron (NM_020754, intron 8 of 11) 64849 NM_018266 55254 Hs.594171 NM_018266 ENSG00000176142 TMEM39A - transmembrane protein 39A protein-coding chr13-4109 chr13 79670052 79670262 + 7.54 0.000 Intergenic AluJo|SINE|Alu 103430 NR_125772 103724388 Hs.434862 NR_125772 ENSG00000227676 LINC01068 - long intergenic non-protein coding RNA 1068 ncRNA chr22-1842 chr22 37867194 37867404 + 7.54 0.000 intron (NM_001363785, intron 6 of 11) AluJr|SINE|Alu 17880 NM_016091 51386 Hs.446852 NM_016091 ENSG00000100129 EIF3L EIF3EIP|EIF3S11|EIF3S6IP|HSPC021|HSPC025|MSTP005 eukaryotic translation initiation factor 3 subunit L protein-coding chr4-3512 chr4 148239042 148239252 + 7.54 0.000 intron (NM_000901, intron 3 of 8) intron (NM_000901, intron 3 of 8) 203267 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr6-7039 chr6 25354522 25354732 + 7.54 0.000 intron (NM_001173977, intron 2 of 36) MLT1L|LTR|ERVL-MaLR 75253 NM_001173977 55604 Hs.649550 NM_017640 ENSG00000079691 CARMIL1 CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5 capping protein regulator and myosin 1 linker 1 protein-coding chr2-10938 chr2 77932170 77932380 + 7.54 0.000 intron (NR_110288, intron 1 of 3) L1PA8|LINE|L1 16341 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA chr4-6283 chr4 81635434 81635644 + 7.54 0.000 Intergenic Intergenic -163632 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr2-11527 chr2 239151043 239151253 + 7.54 0.000 intron (NM_006037, intron 7 of 26) intron (NM_006037, intron 7 of 26) 44309 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr13-2230 chr13 24719864 24720074 + 7.54 0.000 Intergenic Intergenic 39558 NM_001185085 479 Hs.147111 NM_001676 ENSG00000075673 ATP12A ATP1AL1|HK ATPase H+/K+ transporting non-gastric alpha2 subunit protein-coding chr9-4493 chr9 36852513 36852723 + 7.54 0.000 intron (NM_001280549, intron 6 of 7) intron (NM_001280549, intron 6 of 7) 11690 NR_039766 100616278 NR_039766 ENSG00000264922 MIR4540 - microRNA 4540 ncRNA chr11-7066 chr11 120757175 120757385 + 7.54 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 61835 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr1-16238 chr1 209831991 209832201 + 7.54 0.000 intron (NM_014388, intron 3 of 11) (GTTT)n|Simple_repeat|Simple_repeat 4124 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 UTP25 C1orf107|DEF|DIEXF|DJ434O14.5 UTP25 small subunit processor component protein-coding chr6-7615 chr6 77530498 77530708 + 7.54 0.000 Intergenic Intergenic -66581 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr7-5264 chr7 20385138 20385348 + 7.54 0.000 intron (NM_002214, intron 6 of 13) intron (NM_002214, intron 6 of 13) -53481 NR_110120 101927811 Hs.285724 NR_110119 ENSG00000271133 LOC101927811 - uncharacterized LOC101927811 ncRNA chr9-5219 chr9 75617679 75617889 + 7.54 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -272860 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr7-4070 chr7 6494125 6494335 + 7.54 0.000 Intergenic AluY|SINE|Alu -10078 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr20-2506 chr20 34012705 34012915 + 7.54 0.000 intron (NM_007367, intron 1 of 8) intron (NM_007367, intron 1 of 8) -18443 NR_109885 101926888 Hs.405849 NR_109885 ENSG00000285230 RALY-AS1 - RALY antisense RNA 1 ncRNA chr5-6291 chr5 115732104 115732314 + 7.54 0.000 Intergenic Intergenic -59557 NR_104674 102467217 Hs.147738 NR_104674 LOC102467217 - uncharacterized LOC102467217 ncRNA chr6-7825 chr6 102038310 102038520 + 7.54 0.000 intron (NM_001166247, intron 14 of 16) intron (NM_001166247, intron 14 of 16) 639430 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr2-12816 chr2 91840868 91841078 + 7.54 0.000 Intergenic Intergenic 65631 NR_003503 645367 Hs.650223 NR_003503 GGT8P GGT1P1 gamma-glutamyltransferase 8 pseudogene pseudo chr12-5859 chr12 49440280 49440490 + 7.54 0.000 intron (NM_001293285, intron 3 of 14) L1MC4|LINE|L1 51211 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr3-7290 chr3 7715658 7715868 + 7.54 0.000 intron (NM_181874, intron 10 of 10) intron (NM_181874, intron 10 of 10) -180479 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr15-4302 chr15 38769142 38769352 + 7.54 0.000 Intergenic Intergenic 72649 NR_160786 chr16-6140 chr16 20625911 20626121 + 7.54 0.000 intron (NM_001318890, intron 11 of 13) L1MA9|LINE|L1 -49649 NM_001105069 348158 Hs.298252 NM_182617 ENSG00000066813 ACSM2B ACSM2|HXMA|HYST1046 acyl-CoA synthetase medium chain family member 2B protein-coding chr20-3914 chr20 32524335 32524545 + 7.54 0.000 intron (NM_001256798, intron 2 of 10) L3|LINE|CR1 14481 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr10-2897 chr10 117677964 117678174 + 7.54 0.000 Intergenic Intergenic -133001 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr4-7134 chr4 37151246 37151456 + 7.54 0.000 Intergenic L1MA1|LINE|L1 90640 NR_039965 100616435 NR_039965 ENSG00000264319 MIR4801 - microRNA 4801 ncRNA chr10-8739 chr10 103587976 103588186 + 7.54 0.000 intron (NM_004210, intron 4 of 5) AluY|SINE|Alu -70639 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr20-2683 chr20 46118995 46119205 + 7.54 0.000 intron (NR_136327, intron 1 of 7) intron (NR_136327, intron 1 of 7) 786 NM_001362758 958 Hs.472860 NM_001250 ENSG00000101017 CD40 Bp50|CDW40|TNFRSF5|p50 CD40 molecule protein-coding chr6-6589 chr6 141483440 141483650 + 7.54 0.000 Intergenic Intergenic 605254 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chrX-3050 chrX 101394335 101394545 + 7.54 0.000 intron (NM_001199974, intron 3 of 3) AluJb|SINE|Alu 3429 NM_001199974 100529097 Hs.432485 NM_001199973 RPL36A-HNRNPH2 - RPL36A-HNRNPH2 readthrough protein-coding chr3-9767 chr3 70349248 70349458 + 7.54 0.000 Intergenic AluSx1|SINE|Alu -36715 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr7-5114 chr7 4281798 4282008 + 7.54 0.000 Intergenic MER49|LTR|ERV1 -147066 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr18-2743 chr18 79204727 79204937 + 7.54 0.000 intron (NR_148360, intron 9 of 31) intron (NR_148360, intron 9 of 31) 135438 NM_198531 374868 Hs.465475 NM_198531 ENSG00000166377 ATP9B ATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1 ATPase phospholipid transporting 9B (putative) protein-coding chr3-7499 chr3 158910035 158910245 + 7.54 0.000 Intergenic Intergenic 108086 NR_110328 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr17-7107 chr17 73778896 73779106 + 7.54 0.000 intron (NR_027146, intron 2 of 3) MLT1D|LTR|ERVL-MaLR -7821 NR_040020 400620 Hs.348644 NR_040020 ENSG00000234721 LINC02092 - long intergenic non-protein coding RNA 2092 ncRNA chr11-8119 chr11 45390526 45390736 + 7.54 0.000 Intergenic Intergenic 19234 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr1-14852 chr1 77424308 77424518 + 7.54 0.000 intron (NM_012093, intron 8 of 13) AluJo|SINE|Alu 141326 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr10-7223 chr10 118850431 118850641 + 7.54 0.000 Intergenic Intergenic -95566 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr17-8333 chr17 73277180 73277390 + 7.54 0.000 Intergenic MER20|DNA|hAT-Charlie -15405 NM_001129885 642843 Hs.534707 NM_001129885 ENSG00000187959 CPSF4L - cleavage and polyadenylation specific factor 4 like protein-coding chr3-5334 chr3 132064138 132064348 + 7.54 0.000 Intergenic Intergenic -24637 NM_153429 131034 Hs.199877 NM_130808 ENSG00000196353 CPNE4 COPN4|CPN4 copine 4 protein-coding chr19-6652 chr19 33416386 33416596 + 7.54 0.000 intron (NM_001166056, intron 7 of 12) intron (NM_001166056, intron 7 of 12) 41967 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr5-7856 chr5 72476671 72476881 + 7.54 0.000 intron (NM_152625, intron 1 of 4) intron (NM_152625, intron 1 of 4) 30634 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr2-5124 chr2 21223879 21224089 + 7.54 0.000 Intergenic Intergenic 99998 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr20-4260 chr20 49388903 49389113 + 7.54 0.000 intron (NM_004975, intron 1 of 1) Charlie7|DNA|hAT-Charlie 93660 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr9-8269 chr9 112439727 112439937 + 7.54 0.000 intron (NR_036651, intron 6 of 9) MIRb|SINE|MIR -46995 NM_001287038 158405 Hs.656619 NM_133465 ENSG00000165185 KIAA1958 - KIAA1958 protein-coding chr18-2931 chr18 13430693 13430903 + 7.54 0.000 intron (NM_181482, intron 3 of 5) L2|LINE|L2 -3264 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr19-3619 chr19 57241125 57241335 + 7.54 0.000 intron (NM_001145078, intron 1 of 2) MER89|LTR|ERV1 598 NM_001023563 390980 Hs.22488 NM_001023563 ENSG00000204524 ZNF805 - zinc finger protein 805 protein-coding chr12-7469 chr12 64484716 64484926 + 7.54 0.000 intron (NM_013254, intron 9 of 20) intron (NM_013254, intron 9 of 20) 32701 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr1-6822 chr1 95514264 95514474 + 7.54 0.000 non-coding (NR_110621, exon 3 of 3) non-coding (NR_110621, exon 3 of 3) 4253 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA chr11-10405 chr11 114231500 114231710 + 7.54 0.000 intron (NM_006006, intron 4 of 6) intron (NM_006006, intron 4 of 6) -64208 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr2-4523 chr2 34858103 34858313 + 7.54 0.000 Intergenic L1MA1|LINE|L1 180651 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr13-1831 chr13 80473755 80473965 + 7.54 0.000 Intergenic Intergenic -132734 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr10-4200 chr10 104690060 104690270 + 7.54 0.000 intron (NM_014978, intron 1 of 26) intron (NM_014978, intron 1 of 26) -23949 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr12-6502 chr12 105417560 105417770 + 7.54 0.000 Intergenic Intergenic 86974 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr8-3691 chr8 18118298 18118508 + 7.54 0.000 Intergenic Intergenic -33442 NM_001127505 427 Hs.527412 NM_004315 ENSG00000104763 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase 1 protein-coding chr3-7408 chr3 102659323 102659533 + 7.54 0.000 Intergenic AluJb|SINE|Alu 224413 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr6-4255 chr6 8388781 8388991 + 7.54 0.000 Intergenic MER84|LTR|ERV1 46659 NM_001370478 51000 Hs.285847 NM_015948 ENSG00000124786 SLC35B3 C6orf196|CGI-19|PAPST2 solute carrier family 35 member B3 protein-coding chr17-3798 chr17 39935243 39935453 + 7.54 0.000 Intergenic L2b|LINE|L2 -6126 NM_001195545 100505591 Hs.145136 NM_001195545 ENSG00000204913 LRRC3C - leucine rich repeat containing 3C protein-coding chrX-2404 chrX 73708681 73708891 + 7.54 0.000 Intergenic ERV24B_Prim-int|LTR|ERV1 -83419 NR_003255 9383 Hs.529901 NR_003255 ENSG00000270641 TSIX LINC00013|NCRNA00013|XIST-AS|XIST-AS1|XISTAS TSIX transcript, XIST antisense RNA ncRNA chr2-11286 chr2 184999982 185000192 + 7.54 0.000 Intergenic LTR43|LTR|ERV1 166985 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA chr12-6559 chr12 119391485 119391695 + 7.54 0.000 intron (NM_178499, intron 1 of 13) MIRb|SINE|MIR 56861 NM_178499 160777 Hs.98188 NM_178499 ENSG00000183273 CCDC60 - coiled-coil domain containing 60 protein-coding chr9-8102 chr9 98838007 98838217 + 7.54 0.000 intron (NM_024642, intron 6 of 9) MamGypLTR3|LTR|Gypsy 30442 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chrX-1730 chrX 35037331 35037541 + 7.54 0.000 Intergenic L1PA14|LINE|L1 94640 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr19-6562 chr19 19334387 19334597 + 7.54 0.000 intron (NM_015329, intron 1 of 18) intron (NM_015329, intron 1 of 18) 13663 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chr4-5748 chr4 57199111 57199321 + 7.54 0.000 intron (NR_034081, intron 2 of 4) MLT1J2|LTR|ERVL-MaLR -88831 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr1-6197 chr1 205469079 205469289 + 7.54 0.000 TTS (NR_148934) TTS (NR_148934) -13098 NR_103783 101669762 Hs.666219 NR_103783 BLACAT1 LINC00912|linc-UBC1|onco-lncRNA-30 bladder cancer associated transcript 1 ncRNA chr12-7588 chr12 77005799 77006009 + 7.54 0.000 Intergenic Intergenic 59665 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr7-7951 chr7 11236982 11237192 + 7.54 0.000 Intergenic Intergenic 263215 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr9-8262 chr9 111971116 111971326 + 7.54 0.000 Intergenic Intergenic 39121 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr12-5818 chr12 26044010 26044220 + 7.54 0.000 intron (NM_001164747, intron 2 of 5) intron (NM_001164747, intron 2 of 5) -8449 NM_001164746 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr5-5135 chr5 104247237 104247447 + 7.54 0.000 Intergenic MER101B|LTR|ERV1 -684553 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr10-7463 chr10 8532778 8532988 + 7.54 0.000 Intergenic Intergenic 61508 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 - uncharacterized LOC105376398 ncRNA chr3-5406 chr3 160313314 160313524 + 7.54 0.000 intron (NM_001190242, intron 8 of 18) intron (NM_001190242, intron 8 of 18) 70347 NM_001190242 57560 Hs.478095 NM_020800 ENSG00000068885 IFT80 ATD2|SRTD2|WDR56 intraflagellar transport 80 protein-coding chr3-5390 chr3 156167996 156168206 + 7.54 0.000 intron (NM_003471, intron 1 of 13) AluJb|SINE|Alu 25139 NM_003471 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr3-6337 chr3 81125872 81126082 + 7.54 0.000 Intergenic L1M2|LINE|L1 132109 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr13-1553 chr13 30575516 30575726 + 7.54 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) 41966 NM_001370340 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr17-4256 chr17 58432232 58432442 + 7.54 0.000 intron (NM_001080439, intron 5 of 5) L2a|LINE|L2 -14755 NM_017763 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr7-9668 chr7 152005643 152005853 + 7.54 0.000 intron (NM_145292, intron 6 of 8) intron (NM_145292, intron 6 of 8) -19926 NM_001371473 chr11-4998 chr11 73846635 73846845 + 7.54 0.000 intron (NR_134661, intron 4 of 5) AluJb|SINE|Alu -29959 NM_001267806 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr17-5415 chr17 34669683 34669893 + 7.54 0.000 Intergenic Intergenic 89039 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr1-14152 chr1 32324566 32324776 + 7.54 0.000 intron (NM_004964, intron 4 of 13) intron (NM_004964, intron 4 of 13) 11562 NM_023009 65108 Hs.75061 NM_023009 ENSG00000175130 MARCKSL1 F52|MACMARCKS|MLP|MLP1|MRP MARCKS like 1 protein-coding chr17-6435 chr17 7702282 7702492 + 7.54 0.000 exon (NM_001143990, exon 8 of 11) exon (NM_001143990, exon 8 of 11) -2815 NM_001406 1949 Hs.26988 NM_001406 ENSG00000108947 EFNB3 EFL6|EPLG8|LERK8 ephrin B3 protein-coding chr1-11287 chr1 9605415 9605625 + 7.54 0.000 TTS (NM_001010866) TTS (NM_001010866) 16609 NM_001130924 199953 Hs.632365 NM_001010866 ENSG00000188807 TMEM201 Ima1|NET5|SAMP1 transmembrane protein 201 protein-coding chr6-6945 chr6 16344775 16344985 + 7.54 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 106293 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr1-14625 chr1 56329029 56329239 + 7.54 0.000 Intergenic Intergenic -85829 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr7-3710 chr7 55523466 55523676 + 7.54 0.000 intron (NM_030796, intron 1 of 4) MER65C|LTR|ERV1 3309 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr5-6577 chr5 23951524 23951734 + 7.54 0.000 non-coding (NR_131245, exon 1 of 5) non-coding (NR_131245, exon 1 of 5) 281 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA chrX-2491 chrX 88651678 88651888 + 7.54 0.000 Intergenic L1MC1|LINE|L1 -95442 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr8-1115 chr8 94949208 94949418 + 7.54 0.000 promoter-TSS (NR_148908) promoter-TSS (NR_148908) 65 NM_001135733 94241 Hs.492261 NM_033285 ENSG00000164938 TP53INP1 SIP|TP53DINP1|TP53INP1A|TP53INP1B|Teap|p53DINP1 tumor protein p53 inducible nuclear protein 1 protein-coding chr1-13730 chr1 15625158 15625368 + 7.54 0.000 intron (NM_032341, intron 1 of 9) MIR3|SINE|MIR 7805 NM_032341 84301 Hs.718857 NM_032341 ENSG00000197312 DDI2 - DNA damage inducible 1 homolog 2 protein-coding chr1-9035 chr1 12063895 12064105 + 7.54 0.000 intron (NM_001281430, intron 1 of 13) CpG 623 NM_001281430 943 Hs.1314 NM_001243 ENSG00000120949 TNFRSF8 CD30|D1S166E|Ki-1 TNF receptor superfamily member 8 protein-coding chr16-2804 chr16 66131181 66131391 + 7.54 0.000 Intergenic Intergenic -235405 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr4-5240 chr4 169324651 169324861 + 7.54 0.000 Intergenic HERVL-int|LTR|ERVL -53800 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr13-4225 chr13 94657548 94657758 + 7.54 0.000 Intergenic Intergenic 50833 NR_120417 101927248 NR_120417 LOC101927248 - uncharacterized LOC101927248 ncRNA chr12-4748 chr12 52138588 52138798 + 7.54 0.000 Intergenic Intergenic 45124 NR_120440 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr9-8297 chr9 113791203 113791413 + 7.54 0.000 Intergenic Intergenic -84974 NM_001318040 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr12-5930 chr12 72166324 72166534 + 7.54 0.000 Intergenic ERVL-E-int|LTR|ERVL -106320 NM_013381 29953 Hs.199814 NM_013381 ENSG00000072657 TRHDE PAP-II|PGPEP2|TRH-DE thyrotropin releasing hormone degrading enzyme protein-coding chr2-8511 chr2 129233423 129233633 + 7.54 0.000 Intergenic Intergenic 40363 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr9-5010 chr9 25191768 25191978 + 7.54 0.000 Intergenic Tigger2|DNA|TcMar-Tigger 486985 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chrX-2996 chrX 45200921 45201131 + 7.54 0.000 promoter-TSS (NM_024689) promoter-TSS (NM_024689) -150 NM_024689 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chrX-5240 chrX 136862192 136862402 + 7.54 0.000 Intergenic Intergenic 16974 NR_002735 26787 NR_002735 ENSG00000206979 SNORD61 HBII-342|RNU61|U61 small nucleolar RNA, C/D box 61 snoRNA chr6-5687 chr6 111450741 111450951 + 7.54 0.000 intron (NM_002912, intron 2 of 32) Charlie1a|DNA|hAT-Charlie -32626 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr18-1519 chr18 7626609 7626819 + 7.54 0.000 intron (NM_002845, intron 1 of 30) AluJr|SINE|Alu 59398 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr8-4926 chr8 101361465 101361675 + 7.54 0.000 Intergenic Intergenic -7323 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr7-4616 chr7 24294596 24294806 + 7.54 0.000 Intergenic Intergenic 10511 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr15-2365 chr15 40747604 40747814 + 7.54 0.000 intron (NM_001323894, intron 4 of 12) intron (NM_001323894, intron 4 of 12) 7545 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chr3-7072 chr3 177151227 177151437 + 7.54 0.000 intron (NM_001321194, intron 1 of 16) intron (NM_001321194, intron 1 of 16) 45146 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr12-5181 chr12 104377027 104377237 + 7.54 0.000 Intergenic Intergenic 73393 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr10-8549 chr10 93602247 93602457 + 7.54 0.000 promoter-TSS (NM_001323518) promoter-TSS (NM_001323518) -608 NM_001323518 5950 Hs.50223 NM_006744 ENSG00000138207 RBP4 MCOPCB10|RDCCAS retinol binding protein 4 protein-coding chr12-4380 chr12 5135088 5135298 + 7.54 0.000 Intergenic Intergenic 91314 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr11-8564 chr11 276477 276687 + 7.54 0.000 Intergenic L1M4|LINE|L1 -1825 NM_001276700 171389 Hs.352611 NM_138329 ENSG00000174885 NLRP6 AVR|CLR11.4|NALP6|NAVR|NAVR/AVR|PAN3|PYPAF5 NLR family pyrin domain containing 6 protein-coding chr3-7811 chr3 98189179 98189389 + 7.54 0.000 Intergenic Intergenic 20584 NM_001005515 403274 Hs.554713 NM_001005515 ENSG00000233412 OR5H15 - olfactory receptor family 5 subfamily H member 15 protein-coding chr15-3506 chr15 99002322 99002532 + 7.54 0.000 intron (NM_001102612, intron 1 of 4) L1MD2|LINE|L1 3229 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr2-7471 chr2 15271996 15272206 + 7.54 0.000 intron (NR_052013, intron 44 of 50) intron (NR_052013, intron 44 of 50) 289233 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr7-6580 chr7 78072721 78072931 + 7.54 0.000 intron (NM_001301128, intron 20 of 20) AluJo|SINE|Alu 232696 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr12-4758 chr12 52488331 52488541 + 7.54 0.000 exon (NM_005554, exon 7 of 9) exon (NM_005554, exon 7 of 9) 4821 NM_005554 3853 Hs.700779 NM_005554 ENSG00000205420 KRT6A CK-6C|CK-6E|CK6A|CK6C|CK6D|K6A|K6C|K6D|KRT6C|KRT6D|PC3 keratin 6A protein-coding chr17-5480 chr17 40839390 40839600 + 7.54 0.000 Intergenic Intergenic -16881 NM_000421 3858 Hs.99936 NM_000421 ENSG00000186395 KRT10 BCIE|BIE|CK10|EHK|K10|KPP keratin 10 protein-coding chr2-8723 chr2 158312585 158312795 + 7.54 0.000 intron (NM_138803, intron 8 of 13) intron (NM_138803, intron 8 of 13) 144063 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr17-4281 chr17 68930902 68931112 + 7.54 0.000 intron (NM_001288985, intron 7 of 39) intron (NM_001288985, intron 7 of 39) 24385 NM_007168 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr4-8748 chr4 186009191 186009401 + 7.54 0.000 Intergenic L2c|LINE|L2 -52924 NM_001270771 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr9-7157 chr9 134006789 134006999 + 7.54 0.000 Intergenic Intergenic -14570 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr2-4014 chr2 100548248 100548458 + 7.54 0.000 Intergenic L2|LINE|L2 -14640 NM_024065 79031 Hs.469459 NM_024065 ENSG00000115539 PDCL3 HTPHLP|PHLP2A|PHLP3|VIAF|VIAF1 phosducin like 3 protein-coding chr2-9132 chr2 208908332 208908542 + 7.54 0.000 Intergenic L1PB1|LINE|L1 365795 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr2-6294 chr2 58709414 58709624 + 7.54 0.000 intron (NR_033873, intron 2 of 13) intron (NR_033873, intron 2 of 13) 188766 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr12-6278 chr12 47951110 47951320 + 7.54 0.000 Intergenic Intergenic -12332 NM_024056 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr6-6246 chr6 29949831 29950041 + 7.54 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 7404 NM_002116 3105 Hs.181244 NM_002116 ENSG00000206503 HLA-A HLAA major histocompatibility complex, class I, A protein-coding chr5-2583 chr5 73010901 73011111 + 7.54 0.000 intron (NM_001146032, intron 6 of 24) Tigger3b|DNA|TcMar-Tigger 54965 NM_001146032 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr16-6621 chr16 67773552 67773762 + 7.54 0.000 intron (NM_001320238, intron 1 of 12) intron (NM_001320238, intron 1 of 12) 32903 NM_001320240 57610 Hs.368569 NM_020850 ENSG00000141084 RANBP10 - RAN binding protein 10 protein-coding chr19-3520 chr19 41988283 41988493 + 7.54 0.000 intron (NM_152296, intron 2 of 22) intron (NM_152296, intron 2 of 22) 5079 NM_001256213 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr20-3696 chr20 14865070 14865280 + 7.54 0.000 intron (NM_001351663, intron 5 of 17) LTR33A_|LTR|ERVL 64343 NR_072988 100379174 Hs.407533 NR_037841 ENSG00000235914 MACROD2-AS1 BA318C17.1|NCRNA00186 MACROD2 antisense RNA 1 ncRNA chr3-6498 chr3 112525690 112525900 + 7.54 0.000 Intergenic Intergenic -26323 NM_001085357 151888 Hs.445162 NM_181780 ENSG00000186265 BTLA BTLA1|CD272 B and T lymphocyte associated protein-coding chr15-3612 chr15 67938312 67938522 + 7.54 0.000 Intergenic Intergenic -98372 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr6-4407 chr6 26569374 26569584 + 7.54 0.000 non-coding (NR_134611, exon 1 of 2) non-coding (NR_134611, exon 1 of 2) 155 NR_134611 105374988 Hs.551772 NR_134611 ENSG00000284607 LOC105374988 - uncharacterized LOC105374988 ncRNA chr20-3077 chr20 15930689 15930899 + 7.54 0.000 intron (NR_130924, intron 1 of 1) intron (NR_130924, intron 1 of 1) -7480 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr14-3267 chr14 79046071 79046281 + 7.54 0.000 intron (NR_073547, intron 14 of 20) (TTCCT)n|Simple_repeat|Simple_repeat -153806 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chrX-5298 chrX 142465678 142465888 + 7.54 0.000 Intergenic L1PA7|LINE|L1 -260493 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr13-3015 chr13 18693621 18693831 + 7.54 0.000 Intergenic Intergenic 46373 NR_047508 100874164 Hs.739604 NR_047508 LINC00417 - long intergenic non-protein coding RNA 417 ncRNA chr6-3586 chr6 73451665 73451875 + 7.54 0.000 exon (NM_138441, exon 1 of 5) exon (NM_138441, exon 1 of 5) 527 NM_138441 115004 Hs.658405 NM_138441 ENSG00000164430 CGAS C6orf150|MB21D1|h-cGAS cyclic GMP-AMP synthase protein-coding chr4-8510 chr4 161762905 161763115 + 7.54 0.000 intron (NM_001128428, intron 5 of 14) intron (NM_001128428, intron 5 of 14) -259723 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr19-5718 chr19 15309489 15309699 + 7.54 0.000 intron (NM_001330384, intron 1 of 11) L1M5|LINE|L1 22945 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr4-2184 chr4 111806343 111806553 + 7.54 0.000 Intergenic Intergenic -339006 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr4-4828 chr4 108752451 108752661 + 7.54 0.000 intron (NM_031279, intron 6 of 12) intron (NM_031279, intron 6 of 12) 10497 NM_001146590 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr5-2934 chr5 140056339 140056549 + 7.54 0.000 Intergenic MIR|SINE|MIR -13145 NM_013981 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr9-5875 chr9 131337339 131337549 + 7.54 0.000 Intergenic Intergenic 47721 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr12-6094 chr12 123494205 123494415 + 7.54 0.000 intron (NM_178314, intron 4 of 6) intron (NM_178314, intron 4 of 6) 25916 NM_001319244 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr10-6457 chr10 31349259 31349469 + 7.54 0.000 intron (NM_001323675, intron 1 of 6) L1MA8|LINE|L1 27704 NM_001323672 6935 Hs.124503 NM_030751 ENSG00000148516 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding chr1-8034 chr1 234534343 234534553 + 7.54 0.000 Intergenic Intergenic -2669 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr16-6062 chr16 11220725 11220935 + 7.54 0.000 Intergenic AluJo|SINE|Alu 35352 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr6-3614 chr6 109284032 109284242 + 7.54 0.000 intron (NR_152435, intron 24 of 45) intron (NR_152435, intron 24 of 45) 97602 NM_001346500 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr11-8537 chr11 128861058 128861268 + 7.54 0.000 intron (NM_153766, intron 1 of 2) intron (NM_153766, intron 1 of 2) 6210 NM_153767 3758 Hs.527830 NM_000220 ENSG00000151704 KCNJ1 KIR1.1|ROMK|ROMK1 potassium voltage-gated channel subfamily J member 1 protein-coding chr8-5101 chr8 56647260 56647470 + 7.54 0.000 Intergenic Intergenic -87542 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr1-15256 chr1 113313305 113313515 + 7.54 0.000 Intergenic L1M1|LINE|L1 -77105 NM_001142782 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr16-6047 chr16 10677001 10677211 + 7.54 0.000 intron (NM_144674, intron 4 of 6) AluJb|SINE|Alu 17824 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chrX-4630 chrX 77853139 77853349 + 7.54 0.000 intron (NM_032121, intron 7 of 9) LTR65|LTR|ERV1 42191 NM_001367916 84061 Hs.323562 NM_032121 ENSG00000102158 MAGT1 IAP|MRX95|OST3B|PRO0756|SLC58A1|XMEN|bA217H1.1 magnesium transporter 1 protein-coding chr5-2358 chr5 78753301 78753511 + 7.54 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -104634 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr1-12843 chr1 95101545 95101755 + 7.54 0.000 intron (NM_001199679, intron 1 of 6) MER5A|DNA|hAT-Charlie 9133 NM_001199679 148534 Hs.483512 NM_152487 ENSG00000152078 TLCD4 TMEM56 TLC domain containing 4 protein-coding chrX-4994 chrX 117933874 117934084 + 7.54 0.000 intron (NM_001168301, intron 3 of 7) L1PA17|LINE|L1 39759 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr1-11588 chr1 205515987 205516197 + 7.54 0.000 intron (NM_002596, intron 1 of 15) intron (NM_002596, intron 1 of 15) 11423 NM_002596 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr13-2924 chr13 114261542 114261752 + 7.54 0.000 intron (NM_001330104, intron 13 of 16) intron (NM_001330104, intron 13 of 16) -12181 NR_039724 100616227 NR_039724 ENSG00000265450 MIR4502 - microRNA 4502 ncRNA chr11-6054 chr11 30868089 30868299 + 7.54 0.000 intron (NM_001367979, intron 38 of 38) intron (NM_001367979, intron 38 of 38) 124492 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr14-2140 chr14 78991929 78992139 + 7.54 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -207948 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr4-4505 chr4 61238076 61238286 + 7.54 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 36009 NM_001371342 chr11-7150 chr11 127190826 127191036 + 7.54 0.000 Intergenic MER21C|LTR|ERVL -80139 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr8-4673 chr8 138734511 138734721 + 7.54 0.000 intron (NM_152888, intron 23 of 64) L1PA8|LINE|L1 179425 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr2-7084 chr2 170823342 170823552 + 7.54 0.000 intron (NM_013445, intron 3 of 6) CpG-16738 6560 NM_000817 2571 Hs.420036 NM_000817 ENSG00000128683 GAD1 CPSQ1|GAD|SCP glutamate decarboxylase 1 protein-coding chr12-2096 chr12 49042173 49042383 + 7.54 0.000 exon (NM_003482, exon 28 of 54) exon (NM_003482, exon 28 of 54) 13046 NM_003482 8085 Hs.731384 NM_003482 ENSG00000167548 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine methyltransferase 2D protein-coding chr5-2674 chr5 36163830 36164040 + 7.54 0.000 intron (NM_032637, intron 3 of 9) intron (NM_032637, intron 3 of 9) 11824 NM_032637 6502 Hs.23348 NM_005983 ENSG00000145604 SKP2 FBL1|FBXL1|FLB1|p45 S-phase kinase associated protein 2 protein-coding chr2-9999 chr2 20663598 20663808 + 7.54 0.000 Intergenic Intergenic -3441 NM_182828 151449 Hs.447688 NM_182828 ENSG00000143869 GDF7 BMP12 growth differentiation factor 7 protein-coding chr1-12683 chr1 48181784 48181994 + 7.54 0.000 intron (NR_026749, intron 1 of 9) MER1A|DNA|hAT-Charlie 539 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo chr16-4483 chr16 56972896 56973106 + 7.54 0.000 intron (NM_001286085, intron 8 of 14) intron (NM_001286085, intron 8 of 14) 11051 NM_000078 1071 Hs.89538 NM_000078 ENSG00000087237 CETP BPIFF|HDLCQ10 cholesteryl ester transfer protein protein-coding chrX-4262 chrX 40510356 40510566 + 7.54 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -70509 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chr11-8420 chr11 103538071 103538281 + 7.54 0.000 Intergenic Intergenic -311730 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr7-8277 chr7 38673929 38674139 + 7.54 0.000 Intergenic Intergenic 13055 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chr3-9504 chr3 51005688 51005898 + 7.54 0.000 intron (NM_004947, intron 5 of 52) L2a|LINE|L2 330713 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr21-1376 chr21 42091201 42091411 + 7.54 0.000 intron (NM_001004416, intron 6 of 22) intron (NM_001004416, intron 6 of 22) 17228 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr5-3453 chr5 160563934 160564144 + 7.54 0.000 3' UTR (NM_001366655, exon 25 of 25) 3' UTR (NM_001366655, exon 25 of 25) 78687 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr16-6628 chr16 67953874 67954084 + 7.54 0.000 intron (NM_001145964, intron 6 of 23) intron (NM_001145964, intron 6 of 23) -9859 NM_000229 3931 Hs.387239 NM_000229 ENSG00000213398 LCAT - lecithin-cholesterol acyltransferase protein-coding chr11-8427 chr11 107469228 107469438 + 7.54 0.000 Intergenic MER3|DNA|hAT-Charlie -11487 NM_152434 143884 Hs.212140 NM_152434 ENSG00000152404 CWF19L2 - CWF19 like cell cycle control factor 2 protein-coding chr10-8995 chr10 120997445 120997655 + 7.54 0.000 Intergenic Intergenic 146188 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr22-1571 chr22 43395574 43395784 + 7.54 0.000 Intergenic Intergenic -4652 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr2-5919 chr2 14493007 14493217 + 7.54 0.000 Intergenic Intergenic -92154 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr4-2258 chr4 168631399 168631609 + 7.54 0.000 promoter-TSS (NM_001166109) promoter-TSS (NM_001166109) -74 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr2-8198 chr2 88858163 88858373 + 7.54 0.000 Intergenic Intergenic 45898 NR_039635 100616399 NR_039635 ENSG00000265510 MIR4436A mir-4436a microRNA 4436a ncRNA chr11-4668 chr11 58732436 58732646 + 7.54 0.000 promoter-TSS (NM_005838) promoter-TSS (NM_005838) -567 NM_005838 10249 Hs.145384 NM_005838 ENSG00000149124 GLYAT ACGNAT|CAT|GAT glycine-N-acyltransferase protein-coding chr2-3209 chr2 219571007 219571217 + 7.54 0.000 exon (NM_015311, exon 1 of 21) exon (NM_015311, exon 1 of 21) 427 NM_001173431 23363 Hs.526594 NM_015311 ENSG00000124006 OBSL1 - obscurin like 1 protein-coding chr5-7380 chr5 21802918 21803128 + 7.54 0.000 intron (NM_004061, intron 9 of 14) intron (NM_004061, intron 9 of 14) -81431 NR_132788 106635540 NR_132788 SNORA105B - small nucleolar RNA, H/ACA box 105B snoRNA chr16-5504 chr16 12680201 12680411 + 7.54 0.000 intron (NM_001099455, intron 2 of 2) LTR48|LTR|ERV1 -40015 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr4-7725 chr4 89985324 89985534 + 7.54 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 90575 NM_007351 22915 Hs.268107 NM_007351 ENSG00000138722 MMRN1 ECM|EMILIN4|GPIa*|MMRN multimerin 1 protein-coding chr5-8753 chr5 147010690 147010900 + 7.54 0.000 intron (NM_001271900, intron 2 of 10) L2a|LINE|L2 45342 NM_181676 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr13-2594 chr13 73492400 73492610 + 7.54 0.000 Intergenic MIR3|SINE|MIR -71739 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr1-8574 chr1 172322669 172322879 + 7.54 0.000 intron (NR_146559, intron 17 of 20) intron (NR_146559, intron 17 of 20) -97911 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr4-8507 chr4 161308945 161309155 + 7.54 0.000 Intergenic Intergenic -713683 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr15-5115 chr15 89476183 89476393 + 7.54 0.000 intron (NM_001321041, intron 9 of 10) AluJo|SINE|Alu 20295 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr5-7332 chr5 16716358 16716568 + 7.54 0.000 intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -99405 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr22-2737 chr22 39492359 39492569 + 7.54 0.000 TTS (NM_001098270) TTS (NM_001098270) 5240 NM_001098270 4248 Hs.276808 NM_002409 ENSG00000128268 MGAT3 GNT-III|GNT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase protein-coding chr9-6559 chr9 120071556 120071766 + 7.54 0.000 Intergenic MIRc|SINE|MIR 136601 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr3-6535 chr3 117547038 117547248 + 7.54 0.000 Intergenic Intergenic 143782 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr2-10599 chr2 3034667 3034877 + 7.54 0.000 intron (NR_110228, intron 3 of 6) intron (NR_110228, intron 3 of 6) 91254 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr20-482 chr20 31470913 31471123 + 7.54 0.000 intron (NM_001037500, intron 1 of 1) SVA_D|Retroposon|SVA 1995 NM_001037500 245937 Hs.381373 NM_001037500 ENSG00000180383 DEFB124 DEFB-24 defensin beta 124 protein-coding chr15-4062 chr15 68270969 68271179 + 7.54 0.000 Intergenic Intergenic -6671 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr7-4744 chr7 68017235 68017445 + 7.54 0.000 Intergenic AluY|SINE|Alu -2913 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr7-5886 chr7 93759471 93759681 + 7.54 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 42648 NR_039796 100616206 NR_039796 ENSG00000265423 MIR4652 - microRNA 4652 ncRNA chr8-3666 chr8 14457155 14457365 + 7.54 0.000 intron (NM_001322881, intron 2 of 6) LTR13|LTR|ERVK 396250 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr10-4366 chr10 34922443 34922653 + 7.54 0.000 Intergenic L2a|LINE|L2 106780 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr6-5048 chr6 112450447 112450657 + 7.54 0.000 Intergenic L1MA5|LINE|L1 103222 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chrX-2507 chrX 94597231 94597441 + 7.54 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 465890 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr18-2470 chr18 43980617 43980827 + 7.54 0.000 Intergenic Intergenic 550975 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr2-14323 chr2 217811316 217811526 + 7.54 0.000 intron (NM_001308023, intron 25 of 29) intron (NM_001308023, intron 25 of 29) 22312 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr18-3084 chr18 33780642 33780852 + 7.54 0.000 Intergenic MSTA|LTR|ERVL-MaLR 202528 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr10-5242 chr10 65788572 65788782 + 7.54 0.000 Intergenic Intergenic 217252 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr12-6966 chr12 27931660 27931870 + 7.54 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 38211 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr11-10375 chr11 112022192 112022402 + 7.54 0.000 3' UTR (NM_033425, exon 16 of 16) 3' UTR (NM_033425, exon 16 of 16) -2517 NM_001931 1737 Hs.335551 NM_001931 ENSG00000150768 DLAT DLTA|E2|PDC-E2|PDCE2 dihydrolipoamide S-acetyltransferase protein-coding chr3-2512 chr3 8778711 8778921 + 7.54 0.000 Intergenic Intergenic -9202 NM_001354653 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr1-9119 chr1 17906752 17906962 + 7.54 0.000 Intergenic MIR3|SINE|MIR 151524 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr6-7912 chr6 109253600 109253810 + 7.54 0.000 intron (NR_152435, intron 16 of 45) intron (NR_152435, intron 16 of 45) 87874 NR_152435 221262 Hs.373914 NM_173671 ENSG00000203799 CCDC162P C6orf183|C6orf184|C6orf185|CCDC162 coiled-coil domain containing 162, pseudogene pseudo chr1-10248 chr1 117795332 117795542 + 7.54 0.000 Intergenic Intergenic 134184 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr8-5358 chr8 19374728 19374938 + 7.54 0.000 intron (NM_001363110, intron 7 of 8) intron (NM_001363110, intron 7 of 8) 60857 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr1-14644 chr1 57869418 57869628 + 7.54 0.000 intron (NM_001353980, intron 3 of 5) MIR3|SINE|MIR 8942 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr2-14399 chr2 220225339 220225549 + 7.54 0.000 Intergenic MIRc|SINE|MIR -318879 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr2-13807 chr2 174816005 174816215 + 7.54 0.000 intron (NM_001025201, intron 8 of 12) L1MDa|LINE|L1 31508 NM_001206602 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr11-6510 chr11 68852897 68853107 + 7.54 0.000 Intergenic Intergenic -11071 NM_001031847 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr9-4208 chr9 37076115 37076325 + 7.54 0.000 Intergenic AluJr|SINE|Alu -3676 NR_036592 100506710 Hs.446271 NR_036592 ENSG00000281649 EBLN3P EBLN3 endogenous Bornavirus like nucleoprotein 3, pseudogene pseudo chr2-13410 chr2 141310447 141310657 + 7.54 0.000 intron (NM_018557, intron 3 of 90) intron (NM_018557, intron 3 of 90) -723867 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2-11911 chr2 24493891 24494101 + 7.54 0.000 intron (NM_001362952, intron 1 of 23) intron (NM_001362952, intron 1 of 23) 2119 NM_001362952 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr11-5259 chr11 32496071 32496281 + 7.54 0.000 Intergenic MIRb|SINE|MIR 60137 NR_120546 51352 Hs.567499 NM_015855 ENSG00000183242 WT1-AS WIT-1|WIT1|WT1-AS1|WT1AS WT1 antisense RNA ncRNA chr14-5023 chr14 78720719 78720929 + 7.54 0.000 intron (NR_073547, intron 8 of 20) intron (NR_073547, intron 8 of 20) 317105 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chrX-881 chrX 2804344 2804554 + 7.54 0.000 intron (NM_001141920, intron 7 of 9) AluJo|SINE|Alu -24373 NM_001184703 8908 Hs.567381 NM_003918 ENSG00000056998 GYG2 GN-2|GN2 glycogenin 2 protein-coding chr3-9455 chr3 49482241 49482451 + 7.54 0.000 intron (NM_001177640, intron 2 of 3) LTR5A|LTR|ERVK 12214 NM_001177640 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr4-5127 chr4 151898678 151898888 + 7.54 0.000 Intergenic HERVL32-int|LTR|ERVL -137760 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr7-3512 chr7 5486848 5487058 + 7.54 0.000 intron (NM_024963, intron 4 of 4) CpG 8964 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr5-5445 chr5 138254010 138254220 + 7.54 0.000 exon (NM_001496, exon 5 of 8) exon (NM_001496, exon 5 of 8) 20506 NM_001496 2676 Hs.58042 NM_001496 ENSG00000146013 GFRA3 GDNFR3 GDNF family receptor alpha 3 protein-coding chr20-2638 chr20 43478466 43478676 + 7.54 0.000 Intergenic MER57A-int|LTR|ERV1 20675 NR_034009 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr17-4147 chr17 82486699 82486909 + 7.54 0.000 intron (NM_001038618, intron 10 of 10) intron (NM_001038618, intron 10 of 10) 28063 NM_012336 26502 Hs.256526 NM_012336 ENSG00000141562 NARF IOP2 nuclear prelamin A recognition factor protein-coding chr4-3637 chr4 15895469 15895679 + 7.54 0.000 Intergenic Intergenic 43166 NM_005130 9982 Hs.1690 NM_005130 ENSG00000137440 FGFBP1 FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17 fibroblast growth factor binding protein 1 protein-coding chr8-3998 chr8 54756615 54756825 + 7.54 0.000 Intergenic Intergenic 140624 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr19-2573 chr19 925765 925975 + 7.54 0.000 promoter-TSS (NM_005224) promoter-TSS (NM_005224) -165 NM_005224 1820 Hs.501296 NM_005224 ENSG00000116017 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT-rich interaction domain 3A protein-coding chr1-8052 chr1 246826459 246826669 + 7.54 0.000 Intergenic AluJb|SINE|Alu 36947 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr9-5223 chr9 76085127 76085337 + 7.54 0.000 intron (NR_120409, intron 7 of 19) intron (NR_120409, intron 7 of 19) 194559 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr3-9456 chr3 49518253 49518463 + 7.54 0.000 intron (NM_001177640, intron 3 of 3) intron (NM_001177640, intron 3 of 3) 36008 NR_038866 100132677 Hs.435651 NR_038866 ENSG00000226913 BSN-DT BSN-AS2 BSN divergent transcript ncRNA chr14-2646 chr14 68685887 68686097 + 7.54 0.000 Intergenic Intergenic -57205 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr10-6973 chr10 68792303 68792513 + 7.54 0.000 TTS (NM_001282960) TTS (NM_001282960) -35123 NM_001130161 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr2-8592 chr2 138948097 138948307 + 7.54 0.000 Intergenic Intergenic 50878 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr13-2211 chr13 23028663 23028873 + 7.54 0.000 Intergenic Intergenic -112399 NR_138043 100996930 Hs.380803 NR_138043 LINC00621 - long intergenic non-protein coding RNA 621 ncRNA chr2-8151 chr2 84143524 84143734 + 7.54 0.000 Intergenic MER49|LTR|ERV1 -147053 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr10-4302 chr10 14140966 14141176 + 7.54 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 66787 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr9-6896 chr9 89665224 89665434 + 7.54 0.000 non-coding (NR_024280, exon 2 of 6) non-coding (NR_024280, exon 2 of 6) 25546 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr3-5251 chr3 107430608 107430818 + 7.54 0.000 promoter-TSS (NR_110039) promoter-TSS (NR_110039) -217 NR_110039 101929607 Hs.252565 NR_110039 ENSG00000273125 LINC01990 - long intergenic non-protein coding RNA 1990 ncRNA chr11-5199 chr11 12391212 12391422 + 7.54 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 13746 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr20-2602 chr20 38922105 38922315 + 7.54 0.000 3' UTR (NM_001172735, exon 10 of 10) 3' UTR (NM_001172735, exon 10 of 10) -4207 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr5-5785 chr5 174533946 174534156 + 7.54 0.000 Intergenic Intergenic -190531 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr19-6857 chr19 43686037 43686247 + 7.54 0.000 Intergenic AluSz|SINE|Alu -15796 NM_001005376 5329 Hs.466871 NM_002659 ENSG00000011422 PLAUR CD87|U-PAR|UPAR|URKR plasminogen activator, urokinase receptor protein-coding chr12-5902 chr12 59317113 59317323 + 7.54 0.000 Intergenic L1MD2|LINE|L1 -278811 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr18-888 chr18 47425082 47425292 + 7.54 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 44691 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr7-3795 chr7 91685430 91685640 + 7.54 0.000 Intergenic Intergenic 195167 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr4-4935 chr4 124841991 124842201 + 7.54 0.000 Intergenic L1MA3|LINE|L1 -129364 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chrX-4993 chrX 117893567 117893777 + 7.54 0.000 Intergenic Intergenic 80066 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr10-4105 chr10 68236195 68236405 + 7.54 0.000 Intergenic AluSx|SINE|Alu -4187 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding chr17-6635 chr17 65099156 65099366 + 7.54 0.000 Intergenic Intergenic -1551 NR_110801 100507002 Hs.729924 NR_110801 LOC100507002 - uncharacterized LOC100507002 ncRNA chr8-4547 chr8 124690206 124690416 + 7.54 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 38162 NM_001363299 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr10-2875 chr10 95183680 95183890 + 7.54 0.000 Intergenic CpG -10415 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr3-9199 chr3 36806371 36806581 + 7.54 0.000 Intergenic Intergenic 16024 NR_147141 105377031 Hs.333862 NR_147141 ENSG00000279727 LINC02033 - long intergenic non-protein coding RNA 2033 ncRNA chr5-8228 chr5 109481947 109482157 + 7.54 0.000 Intergenic Intergenic -72078 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr14-2146 chr14 85528737 85528947 + 7.54 0.000 Intergenic Intergenic -1183 NR_144386 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr15-4358 chr15 41161840 41162050 + 7.54 0.000 Intergenic Intergenic -45665 NM_017553 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr1-12749 chr1 66015481 66015691 + 7.54 0.000 intron (NM_001037340, intron 1 of 14) L2a|LINE|L2 22970 NM_001037340 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr7-4313 chr7 31427171 31427381 + 7.54 0.000 Intergenic Intergenic -86550 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr3-5230 chr3 94176826 94177036 + 7.54 0.000 Intergenic Intergenic 113870 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr12-2831 chr12 123780854 123781064 + 7.54 0.000 intron (NM_207437, intron 5 of 77) AluSc5|SINE|Alu 18464 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr3-7598 chr3 13314462 13314672 + 7.54 0.000 Intergenic Intergenic 105755 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr11-6986 chr11 116517211 116517421 + 7.54 0.000 Intergenic Intergenic -122106 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr12-5345 chr12 116747006 116747216 + 7.54 0.000 intron (NM_001109903, intron 3 of 11) AluJr|SINE|Alu 8796 NM_032814 84900 Hs.437195 NM_032814 ENSG00000135119 RNFT2 TMEM118 ring finger protein, transmembrane 2 protein-coding chr9-7004 chr9 114483506 114483716 + 7.54 0.000 intron (NM_015404, intron 1 of 11) intron (NM_015404, intron 1 of 11) 19604 NM_001083885 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr10-4265 chr10 1020166 1020376 + 7.54 0.000 TTS (NM_012341) TTS (NM_012341) -2366 NR_027709 55853 Hs.728538 NM_018470 ENSG00000232656 IDI2-AS1 C10orf110|HT009|IDI2-AS IDI2 antisense RNA 1 ncRNA chr3-6971 chr3 165436833 165437043 + 7.54 0.000 intron (NR_125764, intron 3 of 5) AluJb|SINE|Alu 229978 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr18-2688 chr18 58756013 58756223 + 7.54 0.000 Intergenic Intergenic -57762 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr11-6051 chr11 30353824 30354034 + 7.54 0.000 Intergenic MamTip2|DNA|hAT-Tip100 30825 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr3-4000 chr3 58192427 58192637 + 7.54 0.000 TTS (NM_001256560) TTS (NM_001256560) 18440 NM_004944 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding chr1-15892 chr1 183432717 183432927 + 7.54 0.000 Intergenic Intergenic -14442 NM_015039 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr15-1830 chr15 42082986 42083196 + 7.54 0.000 intron (NM_178034, intron 8 of 19) intron (NM_178034, intron 8 of 19) 11471 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr1-8320 chr1 50333127 50333337 + 7.54 0.000 Intergenic CpG 90211 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr7-3847 chr7 101203939 101204149 + 7.54 0.000 Intergenic Intergenic -3008 NM_178176 346606 Hs.512217 NM_178176 ENSG00000106384 MOGAT3 DC7|DGAT2L2|MGAT3 monoacylglycerol O-acyltransferase 3 protein-coding chr1-14523 chr1 51302814 51303024 + 7.54 0.000 intron (NM_001080494, intron 9 of 17) intron (NM_001080494, intron 9 of 17) -4958 NM_001297666 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr13-2469 chr13 50676030 50676240 + 7.54 0.000 Intergenic Intergenic -131720 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr15-4124 chr15 79629427 79629637 + 7.54 0.000 Intergenic HERVL40-int|LTR|ERVL 197016 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr5-3028 chr5 14285028 14285238 + 7.54 0.000 intron (NM_007118, intron 3 of 56) intron (NM_007118, intron 3 of 56) 141791 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr11-7430 chr11 114043277 114043487 + 7.54 0.000 Intergenic Intergenic -16329 NM_006006 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr11-7871 chr11 121138475 121138685 + 7.54 0.000 intron (NM_005422, intron 10 of 22) L3|LINE|CR1 35914 NM_005422 7007 Hs.248162 NM_005422 ENSG00000109927 TECTA DFNA12|DFNA8|DFNB21 tectorin alpha protein-coding chr19-3345 chr19 8482425 8482635 + 7.54 0.000 intron (NM_001297418, intron 10 of 13) intron (NM_001297418, intron 10 of 13) 20110 NM_032152 84106 Hs.465812 NM_032152 ENSG00000133246 PRAM1 PML-RAR|PRAM-1 PML-RARA regulated adaptor molecule 1 protein-coding chr7-4554 chr7 5315689 5315899 + 7.54 0.000 intron (NM_001080495, intron 25 of 29) intron (NM_001080495, intron 25 of 29) 32851 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr2-13780 chr2 172132280 172132490 + 7.54 0.000 Intergenic Intergenic 29379 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr1-12652 chr1 43618426 43618636 + 7.54 0.000 intron (NM_001329137, intron 26 of 34) intron (NM_001329137, intron 26 of 34) -31618 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr11-9829 chr11 72245318 72245528 + 7.54 0.000 Intergenic Intergenic -1247 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr18-2697 chr18 60532179 60532389 + 7.54 0.000 Intergenic LTR41B|LTR|ERVL -159509 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr7-6078 chr7 115671995 115672205 + 7.54 0.000 Intergenic Intergenic -90659 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr1-12866 chr1 103791708 103791918 + 7.54 0.000 Intergenic Intergenic 41972 NM_001008218 277 Hs.599274 NM_001008218 ENSG00000174876 AMY1B AMY1 amylase alpha 1B (salivary) protein-coding chrX-5161 chrX 132188906 132189116 + 7.54 0.000 Intergenic MER91A|DNA|hAT-Tip100 29022 NM_021183 57826 Hs.119889 NM_021183 ENSG00000123728 RAP2C - RAP2C, member of RAS oncogene family protein-coding chr12-8321 chr12 129637561 129637771 + 7.54 0.000 intron (NM_133448, intron 2 of 8) MSTA|LTR|ERVL-MaLR 266359 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr3-9476 chr3 50220466 50220676 + 7.54 0.000 3' UTR (NM_006841, exon 16 of 16) 3' UTR (NM_006841, exon 16 of 16) -6497 NM_001282620 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr8-2642 chr8 69618096 69618306 + 7.54 0.000 intron (NR_156414, intron 12 of 20) intron (NR_156414, intron 12 of 20) 25301 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr5-7539 chr5 38194221 38194431 + 7.54 0.000 Intergenic THE1D|LTR|ERVL-MaLR 45846 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA chr9-4665 chr9 120440714 120440924 + 7.54 0.000 intron (NR_073558, intron 23 of 37) intron (NR_073558, intron 23 of 37) 139348 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr2-10545 chr2 236901121 236901331 + 7.54 0.000 Intergenic L1ME3A|LINE|L1 154941 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr1-3122 chr1 45618503 45618713 + 7.54 0.000 3' UTR (NM_001195193, exon 13 of 13) 3' UTR (NM_001195193, exon 13 of 13) 5446 NM_001190182 149483 Hs.18912 NM_152500 ENSG00000159588 CCDC17 - coiled-coil domain containing 17 protein-coding chr7-6832 chr7 43367970 43368180 + 7.54 0.000 intron (NM_001287059, intron 5 of 27) L2c|LINE|L2 154467 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr4-2749 chr4 8121900 8122110 + 7.54 0.000 intron (NM_001130084, intron 1 of 19) intron (NM_001130084, intron 1 of 19) 36808 NM_001130085 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr2-6258 chr2 44276015 44276225 + 7.54 0.000 intron (NM_000341, intron 1 of 9) intron (NM_000341, intron 1 of 9) 640 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding chr7-8618 chr7 69052163 69052373 + 7.54 0.000 Intergenic Intergenic 545356 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr10-3821 chr10 133009604 133009814 + 7.54 0.000 Intergenic Intergenic 44175 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA chr3-4590 chr3 186400765 186400975 + 7.54 0.000 Intergenic Intergenic -38636 NM_001080744 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr15-3460 chr15 93010306 93010516 + 7.54 0.000 intron (NM_001271, intron 35 of 38) AluSx1|SINE|Alu 62745 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr12-6264 chr12 44223328 44223538 + 7.54 0.000 intron (NM_001286213, intron 4 of 6) intron (NM_001286213, intron 4 of 6) 387352 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr22-1860 chr22 39350397 39350607 + 7.54 0.000 intron (NM_145731, intron 1 of 3) CpG 511 NM_004711 9145 Hs.216226 NM_004711 ENSG00000100321 SYNGR1 - synaptogyrin 1 protein-coding chr8-4928 chr8 101751379 101751589 + 7.54 0.000 intron (NM_001040625, intron 4 of 6) L1MB4|LINE|L1 39485 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chrX-1067 chrX 131922531 131922741 + 7.54 0.000 Intergenic L1MA3|LINE|L1 -91993 NR_026975 286467 Hs.720385 NR_026975 ENSG00000213468 FIRRE LINC01200 firre intergenic repeating RNA element ncRNA chr14-3905 chr14 100037788 100037998 + 7.54 0.000 intron (NM_001330221, intron 1 of 13) intron (NM_001330221, intron 1 of 13) -27529 NM_016337 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr19-5011 chr19 47469263 47469473 + 7.54 0.000 intron (NM_015063, intron 1 of 9) intron (NM_015063, intron 1 of 9) 2525 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr3-9644 chr3 60365512 60365722 + 7.54 0.000 intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) 252253 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr8-1936 chr8 43092888 43093098 + 7.54 0.000 promoter-TSS (NM_001277971) promoter-TSS (NM_001277971) -513 NM_001277971 84197 Hs.491646 NM_032237 ENSG00000185900 POMK MDDGA12|MDDGC12|SGK196 protein O-mannose kinase protein-coding chr9-5207 chr9 73371699 73371909 + 7.54 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 219939 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr5-7187 chr5 6365676 6365886 + 7.54 0.000 Intergenic Intergenic 12766 NM_032286 84246 Hs.13885 NM_032286 ENSG00000133398 MED10 L6|NUT2|TRG20 mediator complex subunit 10 protein-coding chr9-5587 chr9 113879768 113879978 + 7.54 0.000 intron (NM_001318042, intron 1 of 14) intron (NM_001318042, intron 1 of 14) 3564 NM_001318042 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr6-6581 chr6 138882905 138883115 + 7.54 0.000 intron (NM_001077706, intron 16 of 21) intron (NM_001077706, intron 16 of 21) 86899 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr1-8438 chr1 95793700 95793910 + 7.54 0.000 Intergenic Intergenic -198263 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr9-7308 chr9 10268709 10268919 + 7.54 0.000 intron (NM_002839, intron 3 of 45) intron (NM_002839, intron 3 of 45) 344188 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr1-14118 chr1 31335340 31335550 + 7.54 0.000 intron (NM_001282571, intron 3 of 6) AluJo|SINE|Alu 37631 NM_004102 2170 Hs.576372 NM_004102 ENSG00000121769 FABP3 FABP11|H-FABP|M-FABP|MDGI|O-FABP fatty acid binding protein 3 protein-coding chr4-6053 chr4 4572922 4573132 + 7.54 0.000 intron (NR_037888, intron 2 of 5) intron (NR_037888, intron 2 of 5) -30684 NM_001346282 53407 Hs.584913 NM_016930 ENSG00000168818 STX18 Ufe1 syntaxin 18 protein-coding chr5-6838 chr5 114050294 114050504 + 7.54 0.000 Intergenic Intergenic -311671 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr7-3470 chr7 2056305 2056515 + 7.54 0.000 intron (NM_001013837, intron 12 of 18) (CTCTG)n|Simple_repeat|Simple_repeat 32642 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr2-14530 chr2 229375253 229375463 + 7.54 0.000 intron (NM_139072, intron 11 of 12) intron (NM_139072, intron 11 of 12) -104071 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr12-7179 chr12 49290488 49290698 + 7.54 0.000 Intergenic AluJb|SINE|Alu -4554 NM_006262 5630 Hs.37044 NM_006262 ENSG00000135406 PRPH NEF4|PRPH1 peripherin protein-coding chr9-7162 chr9 134202879 134203089 + 7.54 0.000 Intergenic FLAM_C|SINE|Alu -38420 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr16-3034 chr16 49713900 49714110 + 7.54 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) -49681 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr14-4017 chr14 43871553 43871763 + 7.54 0.000 Intergenic L1M1|LINE|L1 635625 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr16-6749 chr16 75086726 75086936 + 7.54 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 29941 NM_194436 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr15-3378 chr15 85930187 85930397 + 7.54 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 104657 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr7-8119 chr7 26797194 26797404 + 7.54 0.000 intron (NM_003930, intron 4 of 12) L1MA1|LINE|L1 60424 NM_001303468 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr9-8013 chr9 94551763 94551973 + 7.54 0.000 Intergenic Intergenic -3177 NR_121568 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr2-14495 chr2 227098176 227098386 + 7.54 0.000 intron (NM_000092, intron 19 of 47) intron (NM_000092, intron 19 of 47) 66278 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr11-7136 chr11 125938419 125938629 + 7.54 0.000 Intergenic LTR50|LTR|ERVL -7532 NM_001365077 338667 Hs.730137 NM_001365077 VSIG10L2 - V-set and immunoglobulin domain containing 10 like 2 protein-coding chr12-8308 chr12 128781287 128781497 + 7.54 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 42566 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr4-5034 chr4 140781779 140781989 + 7.54 0.000 Intergenic Intergenic -25499 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr2-4176 chr2 187722699 187722909 + 7.54 0.000 Intergenic L1PA14|LINE|L1 -168299 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr10-5150 chr10 52933105 52933315 + 7.54 0.000 Intergenic Intergenic -161510 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr6-6682 chr6 166612706 166612916 + 7.54 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 14440 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr1-12711 chr1 53955728 53955938 + 7.54 0.000 intron (NM_001256409, intron 3 of 8) AluY|SINE|Alu 9483 NM_052940 115353 Hs.40094 NM_052940 ENSG00000116212 LRRC42 dJ167A19.4 leucine rich repeat containing 42 protein-coding chr3-3081 chr3 134464075 134464285 + 7.54 0.000 Intergenic Intergenic -21544 NM_001042383 80254 Hs.443301 NM_025180 ENSG00000182923 CEP63 SCKL6 centrosomal protein 63 protein-coding chr1-12982 chr1 155591949 155592159 + 7.54 0.000 Intergenic Intergenic -18116 NM_018116 55154 Hs.656547 NM_018116 ENSG00000125459 MSTO1 LST005|MMYAT|MST misato mitochondrial distribution and morphology regulator 1 protein-coding chr6-7766 chr6 94906164 94906374 + 7.54 0.000 Intergenic L1MA1|LINE|L1 671182 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr12-8190 chr12 122772016 122772226 + 7.54 0.000 Intergenic AluJr|SINE|Alu -2451 NR_027918 84660 Hs.592008 NM_032573 ENSG00000130783 CCDC62 CT109|ERAP75|TSP-NY coiled-coil domain containing 62 protein-coding chr17-3864 chr17 47727929 47728139 + 7.54 0.000 Intergenic Intergenic -5202 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr7-6964 chr7 100921844 100922054 + 7.54 0.000 Intergenic AluSz6|SINE|Alu -24955 NM_001367919 43 Hs.154495 NM_000665 ENSG00000087085 ACHE ACEE|ARACHE|N-ACHE|YT acetylcholinesterase (Cartwright blood group) protein-coding chr4-5969 chr4 173585149 173585359 + 7.54 0.000 non-coding (NR_136195, exon 5 of 5) non-coding (NR_136195, exon 5 of 5) 54796 NR_003679 79804 Hs.61435 NR_003679 ENSG00000237125 HAND2-AS1 DEIN|NBLA00301|UPH HAND2 antisense RNA 1 ncRNA chr2-11627 chr2 4506903 4507113 + 7.54 0.000 Intergenic Intergenic 149214 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr3-6329 chr3 79452596 79452806 + 7.54 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) 40974 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr2-12604 chr2 71155790 71156000 + 7.54 0.000 Intergenic L2|LINE|L2 25261 NM_005791 10199 Hs.656208 NM_005791 ENSG00000124383 MPHOSPH10 CT90|MPP10|MPP10P|PPP1R106 M-phase phosphoprotein 10 protein-coding chr18-3007 chr18 25036156 25036366 + 7.54 0.000 Intergenic Intergenic -48282 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr20-3036 chr20 63055746 63055956 + 7.54 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 17840 NR_033369 100144597 Hs.636485 NR_033369 ENSG00000237119 LINC01056 - long intergenic non-protein coding RNA 1056 ncRNA chr2-5984 chr2 65077515 65077725 + 7.54 0.000 intron (NR_134966, intron 4 of 5) intron (NR_134966, intron 4 of 5) 21204 NM_015147 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr9-6963 chr9 105126268 105126478 + 7.54 0.000 Intergenic Intergenic -118232 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr1-11348 chr1 30199101 30199311 + 7.54 0.000 Intergenic Intergenic -161594 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr11-5299 chr11 45447829 45448039 + 7.54 0.000 Intergenic Intergenic 76537 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr4-5519 chr4 98517368 98517578 + 7.54 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 141138 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr2-13178 chr2 120568500 120568710 + 7.54 0.000 Intergenic Intergenic -102256 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr15-5063 chr15 85501888 85502098 + 7.54 0.000 intron (NM_007200, intron 2 of 36) intron (NM_007200, intron 2 of 36) -117957 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr3-5417 chr3 168643672 168643882 + 7.54 0.000 intron (NR_021485, intron 4 of 15) MER8|DNA|TcMar-Tigger 91923 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA ML143353.1-1 ML143353.1 9008 9218 + 7.54 0.000 NA NA NA NA chr10-8890 chr10 114056694 114056904 + 7.54 0.000 Intergenic Intergenic 12933 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr10-1368 chr10 132251649 132251859 + 7.54 0.000 intron (NM_001318878, intron 1 of 11) intron (NM_001318878, intron 1 of 11) -2646 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr6-6310 chr6 43740022 43740232 + 7.54 0.000 Intergenic Intergenic -30082 NM_001204384 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr11-4146 chr11 46461600 46461810 + 7.54 0.000 intron (NM_001267782, intron 13 of 19) intron (NM_001267782, intron 13 of 19) -9816 NR_036117 100422827 NR_036117 ENSG00000265014 MIR3160-1 mir-3160-1 microRNA 3160-1 ncRNA chr3-7654 chr3 33960335 33960545 + 7.54 0.000 Intergenic L1ME1|LINE|L1 161810 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr4-7475 chr4 71538763 71538973 + 7.54 0.000 intron (NM_003759, intron 15 of 22) MIRb|SINE|MIR 199815 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr5-6159 chr5 45038469 45038679 + 7.54 0.000 Intergenic Intergenic 229627 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chrX-2637 chrX 110915199 110915409 + 7.54 0.000 Intergenic Intergenic -28937 NM_001128167 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr6-7466 chr6 56759812 56760022 + 7.54 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 83748 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr10-7713 chr10 30655793 30656003 + 7.54 0.000 Intergenic Intergenic -26145 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr5-3404 chr5 144187770 144187980 + 7.54 0.000 intron (NM_020768, intron 2 of 3) AmnSINE1|SINE|5S-Deu-L2 17002 NM_020768 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr2-10076 chr2 45578491 45578701 + 7.54 0.000 intron (NM_018079, intron 7 of 20) intron (NM_018079, intron 7 of 20) 32671 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr17-8371 chr17 74588431 74588641 + 7.54 0.000 exon (NM_001115152, exon 2 of 4) exon (NM_001115152, exon 2 of 4) 3618 NM_152460 146723 Hs.350775 NM_152460 C17orf77 - chromosome 17 open reading frame 77 protein-coding chr2-11064 chr2 118064999 118065209 + 7.54 0.000 Intergenic Intergenic -23314 NM_001321330 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding chr17-7031 chr17 59756303 59756513 + 7.54 0.000 intron (NM_001329401, intron 4 of 9) intron (NM_001329401, intron 4 of 9) 48754 NM_001329399 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding chr12-7192 chr12 49784337 49784547 + 7.54 0.000 Intergenic L2|LINE|L2 42633 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr12-6635 chr12 432728 432938 + 7.54 0.000 intron (NM_001130148, intron 6 of 10) AluJo|SINE|Alu -27106 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr9-6489 chr9 95989571 95989781 + 7.54 0.000 intron (NM_020207, intron 17 of 18) intron (NM_020207, intron 17 of 18) 32135 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092 long intergenic non-protein coding RNA 92 ncRNA chrX-5020 chrX 119398187 119398397 + 7.54 0.000 Intergenic Intergenic -1044 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr12-3811 chr12 67624750 67624960 + 7.54 0.000 Intergenic ERVL-int|LTR|ERVL -23890 NM_006482 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr2-14232 chr2 211186044 211186254 + 7.54 0.000 Intergenic Intergenic 568578 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr12-5950 chr12 79901086 79901296 + 7.54 0.000 intron (NM_001244990, intron 2 of 24) intron (NM_001244990, intron 2 of 24) 12720 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr20-1167 chr20 63493349 63493559 + 7.54 0.000 intron (NM_001958, intron 4 of 7) intron (NM_001958, intron 4 of 7) 5629 NM_001958 1917 Hs.433839 NM_001958 ENSG00000101210 EEF1A2 EEF1AL|EF-1-alpha-2|EF1A|EIEE33|HS1|MRD38|STN|STNL eukaryotic translation elongation factor 1 alpha 2 protein-coding chr1-15329 chr1 119562886 119563096 + 7.54 0.000 promoter-TSS (NR_033781) promoter-TSS (NR_033781) -889 NR_033781 128102 Hs.681806 NR_033781 HSD3BP4 - hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 4 pseudo chr13-3400 chr13 92315408 92315618 + 7.54 0.000 intron (NM_004466, intron 7 of 7) Tigger13a|DNA|TcMar-Tigger 36694 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr2-9296 chr2 222280867 222281077 + 7.54 0.000 intron (NM_181457, intron 4 of 7) intron (NM_181457, intron 4 of 7) -17175 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr11-9505 chr11 63105350 63105560 + 7.54 0.000 intron (NM_001136506, intron 4 of 9) THE1B-int|LTR|ERVL-MaLR 38766 NM_173586 283238 Hs.375139 NM_173586 ENSG00000197658 SLC22A24 NET46 solute carrier family 22 member 24 protein-coding chr7-4000 chr7 140082960 140083170 + 7.54 0.000 Intergenic Intergenic -19344 NM_022750 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr22-2648 chr22 35323450 35323660 + 7.54 0.000 exon (NM_005488, exon 5 of 15) exon (NM_005488, exon 5 of 15) -12085 NR_037471 100500826 NR_037471 ENSG00000266320 MIR3909 mir-3909 microRNA 3909 ncRNA chr7-7486 chr7 99371448 99371658 + 7.54 0.000 Intergenic Intergenic -3177 NM_005720 10095 Hs.489284 NM_005720 ENSG00000130429 ARPC1B ARC41|PLTEID|p40-ARC|p41-ARC actin related protein 2/3 complex subunit 1B protein-coding chrX-4953 chrX 112654906 112655116 + 7.54 0.000 intron (NM_178175, intron 3 of 3) MLT1H1|LTR|ERVL-MaLR 24927 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr11-6455 chr11 66812436 66812646 + 7.54 0.000 intron (NM_024650, intron 9 of 16) intron (NM_024650, intron 9 of 16) -30900 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr15-2674 chr15 77860581 77860791 + 7.54 0.000 Intergenic Intergenic -39786 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr6-2907 chr6 14711256 14711466 + 7.54 0.000 Intergenic LTR50|LTR|ERVL -425907 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr11-10060 chr11 84305390 84305600 + 7.54 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) 11844 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-3704 chr9 109124754 109124964 + 7.54 0.000 Intergenic AluSx1|SINE|Alu -4912 NM_032012 23731 Hs.308074 NM_032012 ENSG00000106771 TMEM245 C9orf5|CG-2|CG2 transmembrane protein 245 protein-coding chr2-10534 chr2 234335327 234335537 + 7.54 0.000 Intergenic Intergenic 119163 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr18-2977 chr18 23282114 23282324 + 7.54 0.000 Intergenic Intergenic 126394 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr1-10127 chr1 101853355 101853565 + 7.54 0.000 intron (NM_058170, intron 1 of 5) L2a|LINE|L2 -6380 NR_110212 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr1-7599 chr1 240258601 240258811 + 7.54 0.000 intron (NM_020066, intron 7 of 17) intron (NM_020066, intron 7 of 17) 166823 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr19-5419 chr19 17542558 17542768 + 7.54 0.000 intron (NM_001098524, intron 11 of 15) L2b|LINE|L2 -12986 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr2-13103 chr2 113131757 113131967 + 7.54 0.000 intron (NM_001318914, intron 6 of 6) intron (NM_001318914, intron 6 of 6) 4264 NM_173842 3557 Hs.81134 NM_000577 ENSG00000136689 IL1RN DIRA|ICIL-1RA|IL-1RN|IL-1ra|IL-1ra3|IL1F3|IL1RA|IRAP|MVCD4 interleukin 1 receptor antagonist protein-coding chr2-14208 chr2 208732265 208732475 + 7.54 0.000 intron (NR_136588, intron 3 of 5) L1PA15|LINE|L1 189728 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr10-4923 chr10 23436861 23437071 + 7.54 0.000 Intergenic Intergenic -2303 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr11-8810 chr11 11513488 11513698 + 7.54 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 108412 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chrX-2901 chrX 150316237 150316447 + 7.54 0.000 Intergenic MLT2C2|LTR|ERVL -46975 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr7-9488 chr7 136323635 136323845 + 7.54 0.000 Intergenic Intergenic -346381 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr16-2185 chr16 70369417 70369627 + 7.54 0.000 intron (NM_018332, intron 9 of 11) AluJb|SINE|Alu 22619 NM_018332 55308 Hs.656037 NM_018332 ENSG00000168872 DDX19A DDX19-DDX19L|DDX19L DEAD-box helicase 19A protein-coding chr5-6414 chr5 151182081 151182291 + 7.54 0.000 3' UTR (NM_015621, exon 9 of 9) 3' UTR (NM_015621, exon 9 of 9) -24407 NM_001363114 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr2-6070 chr2 151975092 151975302 + 7.54 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) -1219 NM_001330117 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chr4-3234 chr4 55312488 55312698 + 7.54 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -33649 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding chr19-6461 chr19 17024186 17024396 + 7.54 0.000 intron (NM_015692, intron 1 of 41) intron (NM_015692, intron 1 of 41) 2519 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr12-7968 chr12 110102330 110102540 + 7.54 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -21922 NM_001143779 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr11-10293 chr11 105718684 105718894 + 7.54 0.000 intron (NR_046356, intron 2 of 16) intron (NR_046356, intron 2 of 16) 108083 NR_046356 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr7-3762 chr7 78080262 78080472 + 7.54 0.000 intron (NM_001301128, intron 19 of 20) intron (NM_001301128, intron 19 of 20) 240237 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr18-2644 chr18 43523111 43523321 + 7.54 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -245726 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr15-3297 chr15 77975943 77976153 + 7.54 0.000 Intergenic Intergenic 18177 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr3-10419 chr3 130757986 130758196 + 7.54 0.000 Intergenic Intergenic -11262 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr2-7691 chr2 30879309 30879519 + 7.54 0.000 Intergenic Intergenic -71968 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr14-1210 chr14 77179934 77180144 + 7.54 0.000 Intergenic MIR|SINE|MIR -1759 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding chr12-7203 chr12 49992548 49992758 + 7.54 0.000 exon (NM_013277, exon 15 of 19) exon (NM_013277, exon 15 of 19) 19706 NM_001652 363 Hs.54505 NM_001652 ENSG00000086159 AQP6 AQP2L|KID aquaporin 6 protein-coding chr11-9438 chr11 61037220 61037430 + 7.54 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -56638 NM_001346456 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr18-1334 chr18 76702319 76702529 + 7.54 0.000 Intergenic Intergenic 12395 NR_122073 400661 Hs.514963 NR_122073 ENSG00000276397 LINC01879 - long intergenic non-protein coding RNA 1879 ncRNA chr15-5028 chr15 83039502 83039712 + 7.54 0.000 intron (NM_001011885, intron 4 of 6) AluSx1|SINE|Alu 27645 NM_001011885 53339 Hs.459149 NM_025238 ENSG00000064726 BTBD1 C15orf1|NS5ATP8 BTB domain containing 1 protein-coding chr3-8166 chr3 36211168 36211378 + 7.54 0.000 Intergenic Intergenic -169214 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr7-3395 chr7 128576820 128577030 + 7.54 0.000 Intergenic SVA_D|Retroposon|SVA -64316 NR_024368 402483 Hs.722350 NM_001039682 LINC01000 - long intergenic non-protein coding RNA 1000 ncRNA chr5-5313 chr5 127068863 127069073 + 7.54 0.000 intron (NM_001164479, intron 2 of 4) intron (NM_001164479, intron 2 of 4) 4524 NM_001164478 401207 Hs.49573 NM_001164478 ENSG00000164241 C5orf63 YDR286C chromosome 5 open reading frame 63 protein-coding chr3-11083 chr3 184991988 184992198 + 7.54 0.000 intron (NM_001009921, intron 41 of 46) intron (NM_001009921, intron 41 of 46) 160967 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr13-2472 chr13 50845276 50845486 + 7.54 0.000 intron (NR_046551, intron 4 of 4) intron (NR_046551, intron 4 of 4) -1442 NM_001306135 220107 Hs.673860 NM_198989 ENSG00000186047 DLEU7 - deleted in lymphocytic leukemia 7 protein-coding chr11-4191 chr11 61521308 61521518 + 7.54 0.000 TTS (NM_001370210) TTS (NM_001370210) 12664 NM_001145077 390205 Hs.441122 NM_001145077 ENSG00000204950 LRRC10B - leucine rich repeat containing 10B protein-coding chr6-6205 chr6 15261309 15261519 + 7.54 0.000 intron (NM_001267040, intron 1 of 17) AluSc|SINE|Alu 12559 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr7-5485 chr7 42511777 42511987 + 7.54 0.000 Intergenic Intergenic 194565 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr6-7244 chr6 41532554 41532764 + 7.54 0.000 intron (NR_126415, intron 1 of 1) intron (NR_126415, intron 1 of 1) 13584 NR_126417 101060264 Hs.571099 NR_126415 ENSG00000234753 FOXP4-AS1 - FOXP4 antisense RNA 1 ncRNA chr21-1419 chr21 14880626 14880836 + 7.54 0.000 intron (NR_146322, intron 1 of 3) MER5B|DNA|hAT-Charlie 37937 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr17-7257 chr17 2475384 2475594 + 7.54 0.000 intron (NM_024086, intron 3 of 9) intron (NM_024086, intron 3 of 9) 36399 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr12-7293 chr12 53215652 53215862 + 7.54 0.000 exon (NM_001243730, exon 3 of 9) exon (NM_001243730, exon 3 of 9) 4605 NM_001243732 5916 Hs.1497 NM_000966 ENSG00000172819 RARG NR1B3|RARC retinoic acid receptor gamma protein-coding chr5-9016 chr5 166425468 166425678 + 7.54 0.000 Intergenic LTR16E2|LTR|ERVL 500797 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr7-9583 chr7 147402808 147403018 + 7.54 0.000 intron (NM_014141, intron 9 of 22) MER4B|LTR|ERV1 -24792 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr16-4665 chr16 76639723 76639933 + 7.54 0.000 intron (NR_110934, intron 2 of 3) MER66C|LTR|ERV1 4830 NR_110934 101928203 Hs.737035 NR_110934 ENSG00000250514 LINC02125 - long intergenic non-protein coding RNA 2125 ncRNA chr12-4764 chr12 52677781 52677991 + 7.54 0.000 intron (NM_006121, intron 3 of 8) intron (NM_006121, intron 3 of 8) 2521 NM_006121 3848 Hs.80828 NM_006121 ENSG00000167768 KRT1 CK1|EHK|EHK1|EPPK|K1|KRT1A|NEPPK keratin 1 protein-coding chr14-4430 chr14 32509714 32509924 + 7.54 0.000 intron (NM_004274, intron 2 of 13) intron (NM_004274, intron 2 of 13) 180521 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr22-2761 chr22 40668789 40668999 + 7.54 0.000 Intergenic MSTA|LTR|ERVL-MaLR -10284 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr11-9491 chr11 62391010 62391220 + 7.54 0.000 intron (NM_025080, intron 5 of 6) intron (NM_025080, intron 5 of 6) -27918 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr4-4754 chr4 96630787 96630997 + 7.54 0.000 intron (NR_147149, intron 3 of 3) intron (NR_147149, intron 3 of 3) 320189 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr10-7566 chr10 17199515 17199725 + 7.54 0.000 intron (NM_004412, intron 1 of 10) L2|LINE|L2 2052 NM_001351221 1787 Hs.351665 NM_004412 ENSG00000107614 TRDMT1 DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 tRNA aspartic acid methyltransferase 1 protein-coding chr21-1091 chr21 33651216 33651426 + 7.54 0.000 intron (NM_001001132, intron 1 of 29) L2|LINE|L2 8820 NM_001331010 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr3-7191 chr3 189385599 189385809 + 7.54 0.000 Intergenic AluJb|SINE|Alu -145110 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr1-11413 chr1 56603501 56603711 + 7.54 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -24043 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr13-3163 chr13 102556129 102556339 + 7.54 0.000 Intergenic Intergenic -40752 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr3-9625 chr3 58474993 58475203 + 7.54 0.000 Intergenic Intergenic -16998 NM_001128214 200845 Hs.13982 NM_153331 ENSG00000168301 KCTD6 KCASH3 potassium channel tetramerization domain containing 6 protein-coding chr7-9204 chr7 116573882 116574092 + 7.54 0.000 intron (NR_120506, intron 2 of 4) MIR1_Amn|SINE|MIR 40833 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr18-1943 chr18 35779496 35779706 + 7.54 0.000 Intergenic HAL1|LINE|L1 125032 NM_020474 2589 Hs.514806 NM_020474 ENSG00000141429 GALNT1 GALNAC-T1 polypeptide N-acetylgalactosaminyltransferase 1 protein-coding chr12-5565 chr12 8547030 8547240 + 7.54 0.000 Intergenic L1MC3|LINE|L1 -6230 NM_014358 26253 Hs.236516 NM_014358 ENSG00000166523 CLEC4E CLECSF9|MINCLE C-type lectin domain family 4 member E protein-coding chr3-7655 chr3 34069667 34069877 + 7.54 0.000 Intergenic Intergenic 271142 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr12-7053 chr12 40667057 40667267 + 7.54 0.000 Intergenic Intergenic -25277 NM_001843 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr12-3114 chr12 27969544 27969754 + 7.54 0.000 intron (NM_198965, intron 3 of 5) intron (NM_198965, intron 3 of 5) 327 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr2-12777 chr2 85794134 85794344 + 7.54 0.000 Intergenic L1MB4|LINE|L1 -10562 NR_106719 102466516 NR_106719 ENSG00000278783 MIR6071 hsa-mir-6071 microRNA 6071 ncRNA chr14-4130 chr14 73002590 73002800 + 7.54 0.000 intron (NM_021260, intron 2 of 11) intron (NM_021260, intron 2 of 11) -15739 NM_001281735 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr18-2120 chr18 52694854 52695064 + 7.54 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 354762 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr3-8193 chr3 41171781 41171991 + 7.54 0.000 Intergenic L2b|LINE|L2 -27619 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr7-8303 chr7 40067298 40067508 + 7.54 0.000 intron (NM_003718, intron 9 of 13) AluSz6|SINE|Alu 67219 NM_138701 136647 Hs.654989 NM_138701 ENSG00000168303 MPLKIP ABHS|C7orf11|ORF20|TTD4 M-phase specific PLK1 interacting protein protein-coding chr5-5727 chr5 169013980 169014190 + 7.54 0.000 intron (NR_109897, intron 1 of 4) intron (NR_109897, intron 1 of 4) 858 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr9-7215 chr9 473769 473979 + 7.54 0.000 intron (NM_001256876, intron 3 of 15) AluSc|SINE|Alu 3583 NM_001256876 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr11-6110 chr11 36773684 36773894 + 7.54 0.000 Intergenic MER117|DNA|hAT-Charlie -175510 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr9-6885 chr9 87441568 87441778 + 7.54 0.000 Intergenic MSTA|LTR|ERVL-MaLR -55555 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr9-8258 chr9 111910432 111910642 + 7.54 0.000 intron (NM_003358, intron 1 of 8) L1MEd|LINE|L1 13723 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr16-2377 chr16 66266956 66267166 + 7.54 0.000 Intergenic Intergenic -99630 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr19-6627 chr19 31071926 31072136 + 7.54 0.000 Intergenic Intergenic -95479 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr4-2075 chr4 20442577 20442787 + 7.54 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 50493 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr3-6219 chr3 64728740 64728950 + 7.54 0.000 intron (NR_038264, intron 1 of 5) intron (NR_038264, intron 1 of 5) -40845 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr12-7602 chr12 78754961 78755171 + 7.54 0.000 Intergenic Intergenic -108916 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr3-5631 chr3 10577551 10577761 + 7.54 0.000 intron (NM_001353564, intron 1 of 20) intron (NM_001353564, intron 1 of 20) 42305 NM_001353564 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr1-6003 chr1 51803389 51803599 + 7.54 0.000 intron (NM_001101662, intron 20 of 30) intron (NM_001101662, intron 20 of 30) 32908 NR_031580 100313892 NR_031580 ENSG00000283899 MIR761 hsa-mir-761 microRNA 761 ncRNA chr17-8198 chr17 63315623 63315833 + 7.54 0.000 intron (NM_025185, intron 9 of 25) intron (NM_025185, intron 9 of 25) 124539 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr9-5229 chr9 76447578 76447788 + 7.54 0.000 intron (NM_001097634, intron 1 of 2) intron (NM_001097634, intron 1 of 2) 6017 NM_001097634 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr1-16461 chr1 228043512 228043722 + 7.54 0.000 intron (NM_033131, intron 2 of 3) intron (NM_033131, intron 2 of 3) 32933 NR_158166 100506571 NR_158166 LINC02809 - long intergenic non-protein coding RNA 2809 ncRNA chr16-6592 chr16 67040195 67040405 + 7.54 0.000 intron (NM_001368708, intron 3 of 4) intron (NM_001368708, intron 3 of 4) 11151 NM_001368710 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding chrX-3877 chrX 4746467 4746677 + 7.54 0.000 Intergenic Intergenic -113000 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr7-7627 chr7 134995919 134996129 + 7.54 0.000 TTS (NM_001367816) TTS (NM_001367816) 9516 NM_001367814 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr12-4907 chr12 67034086 67034296 + 7.54 0.000 Intergenic Intergenic 62093 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr17-6258 chr17 31340306 31340516 + 7.54 0.000 intron (NM_001042492, intron 46 of 57) intron (NM_001042492, intron 46 of 57) -18789 NM_014210 2123 Hs.591198 NM_014210 ENSG00000126860 EVI2A EVDA|EVI-2A|EVI2 ecotropic viral integration site 2A protein-coding chr10-4533 chr10 96115031 96115241 + 7.54 0.000 Intergenic FLAM_A|SINE|Alu -14579 NM_014803 9849 Hs.600823 NM_014803 ENSG00000177853 ZNF518A ZNF518 zinc finger protein 518A protein-coding chr7-7693 chr7 156611586 156611796 + 7.54 0.000 intron (NR_026865, intron 1 of 3) MLT2B5|LTR|ERVL -8496 NR_103858 100506380 Hs.647014 NM_032625 ENSG00000182648 LINC01006 C7orf13|MY040 long intergenic non-protein coding RNA 1006 ncRNA chr12-5968 chr12 87672760 87672970 + 7.54 0.000 Intergenic L1ME3F|LINE|L1 -95947 NR_149056 110806294 Hs.615803 NR_149056 LINC02258 - long intergenic non-protein coding RNA 2258 ncRNA chr9-3402 chr9 131218382 131218592 + 7.54 0.000 intron (NM_001318324, intron 31 of 35) intron (NM_001318324, intron 31 of 35) 28348 NM_001318325 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr7-3496 chr7 2814361 2814571 + 7.54 0.000 intron (NM_001282441, intron 1 of 4) intron (NM_001282441, intron 1 of 4) 764 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr11-8870 chr11 14006439 14006649 + 7.54 0.000 intron (NM_006108, intron 2 of 15) intron (NM_006108, intron 2 of 15) 43821 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr1-7676 chr1 19237309 19237519 + 7.54 0.000 intron (NM_001271428, intron 11 of 22) intron (NM_001271428, intron 11 of 22) 14110 NM_001271427 23065 Hs.439200 NM_015047 ENSG00000127463 EMC1 CAVIPMR|KIAA0090 ER membrane protein complex subunit 1 protein-coding chr13-2778 chr13 99834377 99834587 + 7.54 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) -105481 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr1-11293 chr1 11294478 11294688 + 7.54 0.000 intron (NM_001330349, intron 2 of 2) intron (NM_001330349, intron 2 of 2) 21385 NM_013319 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr21-495 chr21 25457531 25457741 + 7.54 0.000 Intergenic Intergenic -25935 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA chr10-5598 chr10 93357751 93357961 + 7.54 0.000 intron (NM_013451, intron 29 of 53) intron (NM_013451, intron 29 of 53) 124478 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr7-6824 chr7 38426283 38426493 + 7.54 0.000 intron (NM_001635, intron 15 of 20) intron (NM_001635, intron 15 of 20) 84811 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr6-8528 chr6 160197500 160197710 + 7.54 0.000 Intergenic L1MA5A|LINE|L1 61216 NM_003058 6582 Hs.436385 NM_003058 ENSG00000112499 SLC22A2 OCT2 solute carrier family 22 member 2 protein-coding chr8-4730 chr8 142124647 142124857 + 7.54 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -51587 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr14-1291 chr14 103547161 103547371 + 7.54 0.000 Intergenic Intergenic 15054 NM_001015049 9529 Hs.5443 NM_004873 ENSG00000166170 BAG5 BAG-5 BCL2 associated athanogene 5 protein-coding chr12-4869 chr12 62058226 62058436 + 7.54 0.000 intron (NM_178539, intron 1 of 4) L1MEd|LINE|L1 134508 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr12-7608 chr12 79097156 79097366 + 7.54 0.000 intron (NM_005639, intron 3 of 10) intron (NM_005639, intron 3 of 10) 51569 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr12-6143 chr12 1655732 1655942 + 7.54 0.000 Intergenic AluJb|SINE|Alu 4543 NR_037422 100500816 NR_037422 ENSG00000266043 MIR3649 - microRNA 3649 ncRNA chr2-5439 chr2 120814117 120814327 + 7.54 0.000 intron (NM_005270, intron 2 of 13) LTR16C|LTR|ERVL 21941 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr4-4404 chr4 43651411 43651621 + 7.54 0.000 Intergenic Intergenic -158973 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr12-7475 chr12 65053312 65053522 + 7.54 0.000 intron (NM_007191, intron 9 of 9) THE1D|LTR|ERVL-MaLR -61126 NR_146276 109729131 Hs.577553 NR_146276 ENSG00000248995 LINC02231 - long intergenic non-protein coding RNA 2231 ncRNA chr4-8111 chr4 126085251 126085461 + 7.54 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 578097 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr20-3350 chr20 31416020 31416230 + 7.54 0.000 Intergenic AluSz|SINE|Alu -3287 NM_001171832 245934 Hs.272294 NM_001011878 ENSG00000204548 DEFB121 DEFB21|ESC42RELC defensin beta 121 protein-coding chr14-1219 chr14 90397873 90398083 + 7.54 0.000 promoter-TSS (NM_001363670) promoter-TSS (NM_001363670) -272 NM_001363670 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAM2|CAM3|CAMB|CAMC|CAMI|CAMIII|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr5-4438 chr5 2447578 2447788 + 7.54 0.000 Intergenic Intergenic -135482 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr2-10669 chr2 21860944 21861154 + 7.54 0.000 Intergenic Intergenic -150397 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr13-2334 chr13 33722621 33722831 + 7.54 0.000 Intergenic Intergenic -45932 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chrX-2053 chrX 18644049 18644259 + 7.54 0.000 intron (NM_000330, intron 5 of 5) intron (NM_000330, intron 5 of 5) 27949 NM_000330 6247 Hs.715725 NM_000330 ENSG00000102104 RS1 RS|XLRS1 retinoschisin 1 protein-coding chr1-16061 chr1 202076805 202077015 + 7.54 0.000 Intergenic L2a|LINE|L2 -46007 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr1-6493 chr1 22554095 22554305 + 7.54 0.000 Intergenic MIR3|SINE|MIR -9289 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr6-3427 chr6 119081419 119081629 + 7.54 0.000 intron (NM_001288576, intron 1 of 15) LTR1A2|LTR|ERV1 -2860 NM_024581 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr12-3696 chr12 2772251 2772461 + 7.54 0.000 intron (NR_146317, intron 2 of 3) MIR3|SINE|MIR -22614 NM_002014 2288 Hs.524183 NM_002014 ENSG00000004478 FKBP4 FKBP51|FKBP52|FKBP59|HBI|Hsp56|PPIase|p52 FKBP prolyl isomerase 4 protein-coding chr5-6615 chr5 37992824 37993034 + 7.54 0.000 Intergenic MIRc|SINE|MIR -32768 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr16-5637 chr16 65312307 65312517 + 7.54 0.000 intron (NR_027755, intron 7 of 8) intron (NR_027755, intron 7 of 8) -135839 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr6-8096 chr6 125799067 125799277 + 7.54 0.000 intron (NR_126386, intron 2 of 2) intron (NR_126386, intron 2 of 2) 8212 NM_001199621 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr2-9926 chr2 238356754 238356964 + 7.54 0.000 intron (NM_001139490, intron 13 of 14) AluY|SINE|Alu 36315 NM_001139490 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding chr3-10715 chr3 153783247 153783457 + 7.54 0.000 Intergenic Intergenic -20826 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr2-3069 chr2 105744784 105744994 + 7.54 0.000 promoter-TSS (NM_001004722) promoter-TSS (NM_001004722) -23 NM_003581 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr2-12902 chr2 99483806 99484016 + 7.54 0.000 intron (NR_135652, intron 1 of 21) MIR3|SINE|MIR 6106 NM_001321455 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr6-4293 chr6 14068121 14068331 + 7.54 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -49030 NM_001251901 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr13-2491 chr13 51966313 51966523 + 7.54 0.000 intron (NM_001005918, intron 4 of 16) intron (NM_001005918, intron 4 of 16) 45032 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chr1-10508 chr1 166838486 166838696 + 7.54 0.000 promoter-TSS (NM_001314014) promoter-TSS (NM_001314014) -884 NM_001314014 57645 Hs.432752 NM_017542 ENSG00000143157 POGK BASS2|KRBOX2|LST003 pogo transposable element derived with KRAB domain protein-coding chr11-10462 chr11 117616368 117616578 + 7.54 0.000 intron (NM_020693, intron 3 of 32) L1ME3A|LINE|L1 180743 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr5-7398 chr5 24584984 24585194 + 7.54 0.000 intron (NM_001362460, intron 2 of 9) AluJr|SINE|Alu 59889 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr10-6970 chr10 68043195 68043405 + 7.54 0.000 intron (NM_001278186, intron 3 of 22) intron (NM_001278186, intron 3 of 22) 31983 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr5-8743 chr5 146344615 146344825 + 7.54 0.000 Intergenic Intergenic 5881 NM_002700 5459 Hs.553499 NM_002700 ENSG00000091010 POU4F3 BRN3C|DFNA15|DFNA42|DFNA52 POU class 4 homeobox 3 protein-coding chr22-4018 chr22 40296463 40296673 + 7.54 0.000 intron (NM_015088, intron 10 of 20) AluY|SINE|Alu -49932 NM_001363840 158 Hs.75527 NM_000026 ENSG00000239900 ADSL AMPS|ASASE|ASL adenylosuccinate lyase protein-coding chr21-1353 chr21 35575402 35575612 + 7.54 0.000 intron (NR_073512, intron 1 of 2) intron (NR_073512, intron 1 of 2) 5257 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr3-3057 chr3 127084551 127084761 + 7.54 0.000 Intergenic Intergenic 96062 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr17-5918 chr17 74803840 74804050 + 7.54 0.000 intron (NM_017728, intron 8 of 9) intron (NM_017728, intron 8 of 9) 27446 NM_001321264 54868 Hs.370262 NM_017728 ENSG00000109066 TMEM104 - transmembrane protein 104 protein-coding chr21-175 chr21 43262603 43262813 + 7.54 0.000 Intergenic Intergenic 69331 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr5-9152 chr5 176814384 176814594 + 7.54 0.000 intron (NM_133369, intron 1 of 14) intron (NM_133369, intron 1 of 14) 3930 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 netrin receptor A protein-coding chr5-1781 chr5 38049319 38049529 + 7.54 0.000 intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) 23727 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr10-8119 chr10 69694207 69694417 + 7.54 0.000 Intergenic Charlie8|DNA|hAT-Charlie 64065 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr8-3173 chr8 97888001 97888211 + 7.54 0.000 exon (NM_001317748, exon 2 of 18) exon (NM_001317748, exon 2 of 18) 19042 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr10-5480 chr10 80015704 80015914 + 7.54 0.000 Intergenic LTR8A|LTR|ERV1 -62837 NM_001270372 80195 Hs.169982 NM_025125 ENSG00000133678 TMEM254 C10orf57|bA369J21.6 transmembrane protein 254 protein-coding chr9-7451 chr9 26715929 26716139 + 7.54 0.000 Intergenic LTR5_Hs|LTR|ERVK 176768 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr2-9584 chr2 241034532 241034742 + 7.54 0.000 exon (NM_001080437, exon 4 of 32) exon (NM_001080437, exon 4 of 32) 36019 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr18-2240 chr18 69664994 69665204 + 7.54 0.000 intron (NM_152721, intron 3 of 7) AluSx4|SINE|Alu 195168 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr22-3669 chr22 23095395 23095605 + 7.54 0.000 5' UTR (NM_002073, exon 2 of 3) 5' UTR (NM_002073, exon 2 of 3) 24981 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr7-7697 chr7 156958177 156958387 + 7.54 0.000 intron (NM_001353366, intron 3 of 10) intron (NM_001353366, intron 3 of 10) 8570 NM_001353366 64434 Hs.15825 NM_138400 ENSG00000146909 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding chr7-2803 chr7 90321226 90321436 + 7.54 0.000 Intergenic CpG -13892 NR_110085 101927446 Hs.734999 NR_110085 ENSG00000105793 LOC101927446 - uncharacterized LOC101927446 ncRNA chr5-8359 chr5 121095630 121095840 + 7.54 0.000 Intergenic L1MC1|LINE|L1 -226815 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr17-7582 chr17 20958829 20959039 + 7.54 0.000 TTS (NR_160715) TTS (NR_160715) 20368 NR_160718 339260 Hs.661076 NR_123730 ENSG00000233098 LOC339260 - uncharacterized LOC339260 ncRNA chr17-7363 chr17 7072208 7072418 + 7.54 0.000 Intergenic Intergenic 7938 NM_182906 10462 Hs.54403 NM_006344 ENSG00000132514 CLEC10A CD301|CLECSF13|CLECSF14|HML|HML2|MGL C-type lectin domain containing 10A protein-coding chr15-2418 chr15 68998185 68998395 + 7.54 0.000 intron (NR_033672, intron 2 of 16) intron (NR_033672, intron 2 of 16) -16405 NM_024505 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr4-4327 chr4 33060986 33061196 + 7.54 0.000 Intergenic Intergenic 710053 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chrX-4958 chrX 113023679 113023889 + 7.54 0.000 Intergenic MLT2B1|LTR|ERVL -18943 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chrX-3587 chrX 77467189 77467399 + 7.54 0.000 Intergenic L1M1|LINE|L1 19905 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr12-3844 chr12 96399074 96399284 + 7.54 0.000 intron (NM_002595, intron 1 of 16) intron (NM_002595, intron 1 of 16) 1260 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chrX-1282 chrX 111242260 111242470 + 7.54 0.000 Intergenic L1PA8|LINE|L1 28118 NM_014289 827 Hs.496593 NM_014289 ENSG00000077274 CAPN6 CANPX|CAPNX|CalpM|DJ914P14.1 calpain 6 protein-coding chr7-9667 chr7 151954961 151955171 + 7.54 0.000 Intergenic LTR45C|LTR|ERV1 -1380 NR_033169 168391 Hs.647077 NM_145292 ENSG00000106648 GALNTL5 GALNACT19|GALNT15|GalNAc-T5L polypeptide N-acetylgalactosaminyltransferase like 5 protein-coding chr15-4618 chr15 61768200 61768410 + 7.54 0.000 Intergenic Intergenic 38387 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr9-8055 chr9 97295793 97296003 + 7.54 0.000 non-coding (NR_036526, exon 16 of 16) non-coding (NR_036526, exon 16 of 16) -11439 NM_001348010 100499483 Hs.435629 NM_020893 ENSG00000197816 CCDC180 C9orf174 coiled-coil domain containing 180 protein-coding chr16-4476 chr16 56671684 56671894 + 7.54 0.000 TTS (NM_005951) TTS (NM_005951) 1975 NM_005951 4496 Hs.438462 NM_005951 ENSG00000205358 MT1H MT-0|MT-1H|MT-IH|MT1 metallothionein 1H protein-coding chr4-5053 chr4 142519421 142519631 + 7.54 0.000 intron (NM_003866, intron 2 of 26) intron (NM_003866, intron 2 of 26) 327009 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr2-10392 chr2 179779180 179779390 + 7.54 0.000 intron (NR_148056, intron 1 of 9) L2b|LINE|L2 -32775 NM_001352815 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr8-6640 chr8 78281519 78281729 + 7.54 0.000 Intergenic Intergenic -234716 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr4-3174 chr4 1967514 1967724 + 7.54 0.000 intron (NM_001042424, intron 18 of 21) Tigger5|DNA|TcMar-Tigger -7017 NR_003004 677770 Hs.676951 NR_003004 ENSG00000249784 SCARNA22 ACA11 small Cajal body-specific RNA 22 ncRNA chr3-7519 chr3 172981792 172982002 + 7.54 0.000 intron (NM_031955, intron 4 of 10) MER58A|DNA|hAT-Charlie 159338 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr13-3730 chr13 40649977 40650187 + 7.54 0.000 intron (NM_002015, intron 1 of 2) MER41A|LTR|ERV1 16559 NM_002015 2308 Hs.370666 NM_002015 ENSG00000150907 FOXO1 FKH1|FKHR|FOXO1A forkhead box O1 protein-coding chr14-4191 chr14 88769755 88769965 + 7.54 0.000 intron (NM_183387, intron 1 of 42) L1MC4a|LINE|L1 23093 NM_183387 161436 Hs.325846 NM_183387 ENSG00000165521 EML5 EMAP-2|EMAP-5 EMAP like 5 protein-coding chr6-3555 chr6 46584750 46584960 + 7.54 0.000 intron (NM_016593, intron 10 of 11) L2a|LINE|L2 67963 NM_016593 51302 Hs.387367 NM_016593 ENSG00000146233 CYP39A1 - cytochrome P450 family 39 subfamily A member 1 protein-coding chr1-9268 chr1 25081218 25081428 + 7.54 0.000 Intergenic L2c|LINE|L2 57820 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA ML143364.1-1 ML143364.1 69888 70098 + 7.54 0.000 NA NA NA NA chr7-8378 chr7 44588309 44588519 + 7.54 0.000 Intergenic AluJr|SINE|Alu -6119 NM_001303058 222068 Hs.598832 NM_182547 ENSG00000158604 TMED4 ERS25|GMP25iso|HNLF|p24a3|p24alpha3 transmembrane p24 trafficking protein 4 protein-coding chr22-1759 chr22 25875886 25876096 + 7.54 0.000 intron (NM_001318245, intron 23 of 43) intron (NM_001318245, intron 23 of 43) 133803 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr15-1350 chr15 59587691 59587901 + 7.54 0.000 Intergenic AluSz|SINE|Alu -23987 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr20-1877 chr20 44756160 44756370 + 7.54 0.000 exon (NM_001205317, exon 6 of 6) exon (NM_001205317, exon 6 of 6) -10038 NR_132377 106144538 Hs.255479 NR_132377 KCNK15-AS1 - KCNK15 and WISP2 antisense RNA 1 ncRNA chr19-5285 chr19 352223 352433 + 7.54 0.000 Intergenic LTR16|LTR|ERVL -7487 NM_017550 54531 Hs.101891 NM_017550 ENSG00000105556 MIER2 KIAA1193|Mi-er2 MIER family member 2 protein-coding chr4-3811 chr4 113878681 113878891 + 7.54 0.000 Intergenic LTR35|LTR|ERV1 100861 NM_001354211 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr17-6023 chr17 78443218 78443428 + 7.54 0.000 intron (NM_173628, intron 71 of 80) intron (NM_173628, intron 71 of 80) -41587 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr19-4206 chr19 46021640 46021850 + 7.54 0.000 intron (NM_005091, intron 1 of 2) L2a|LINE|L2 1308 NM_005091 8993 Hs.137583 NM_005091 ENSG00000008438 PGLYRP1 PGLYRP|PGRP|PGRP-S|PGRPS|TAG7|TNFSF3L peptidoglycan recognition protein 1 protein-coding chr1-11937 chr1 63182820 63183030 + 7.54 0.000 intron (NR_038252, intron 6 of 11) L1MA8|LINE|L1 134332 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chrX-1663 chrX 150912422 150912632 + 7.54 0.000 Intergenic Intergenic -13711 NM_001242614 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr1-4740 chr1 6264770 6264980 + 7.54 0.000 intron (NM_181866, intron 8 of 8) intron (NM_181866, intron 8 of 8) -3777 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr22-3628 chr22 21260795 21261005 + 7.54 0.000 intron (NM_001351304, intron 1 of 16) intron (NM_001351304, intron 1 of 16) 16962 NM_001351304 728441 Hs.568255 NM_001351304 ENSG00000133475 GGT2 GGT|GGT 2 gamma-glutamyltransferase 2 protein-coding chr5-7531 chr5 37724783 37724993 + 7.54 0.000 intron (NM_001345998, intron 15 of 17) intron (NM_001345998, intron 15 of 17) 109934 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chrX-4869 chrX 105504856 105505066 + 7.54 0.000 intron (NM_017416, intron 6 of 10) intron (NM_017416, intron 6 of 10) -284268 NM_031274 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr7-4610 chr7 22945606 22945816 + 7.54 0.000 exon (NM_032581, exon 11 of 11) exon (NM_032581, exon 11 of 11) 68419 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr4-4343 chr4 37665121 37665331 + 7.54 0.000 intron (NM_001085400, intron 1 of 6) intron (NM_001085400, intron 1 of 6) 21150 NM_001085400 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr4-7107 chr4 34223666 34223876 + 7.54 0.000 intron (NR_147184, intron 2 of 3) L1MA3|LINE|L1 45976 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr3-7879 chr3 128459401 128459611 + 7.54 0.000 Intergenic Intergenic -4088 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr2-14269 chr2 215096710 215096920 + 7.54 0.000 intron (NR_103740, intron 2 of 54) intron (NR_103740, intron 2 of 54) 41811 NM_173076 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr1-9757 chr1 54734271 54734481 + 7.54 0.000 intron (NM_004623, intron 8 of 9) intron (NM_004623, intron 8 of 9) 18515 NM_004623 7268 Hs.412482 NM_004623 ENSG00000243725 TTC4 CNS1 tetratricopeptide repeat domain 4 protein-coding chr17-7655 chr17 29841161 29841371 + 7.54 0.000 intron (NM_033389, intron 1 of 14) L1ME3A|LINE|L1 -79834 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr2-6324 chr2 71452517 71452727 + 7.54 0.000 promoter-TSS (NM_001130976) promoter-TSS (NM_001130976) -939 NM_001130977 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr22-4087 chr22 43179440 43179650 + 7.54 0.000 intron (NM_015140, intron 5 of 13) intron (NM_015140, intron 5 of 13) 7589 NM_015140 23170 Hs.517670 NM_015140 ENSG00000100304 TTLL12 dJ526I14.2 tubulin tyrosine ligase like 12 protein-coding chr2-13956 chr2 186857855 186858065 + 7.54 0.000 Intergenic Intergenic -8790 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr6-4884 chr6 90406049 90406259 + 7.54 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 93412 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr22-3474 chr22 43535891 43536101 + 7.54 0.000 non-coding (NR_046563, exon 3 of 3) non-coding (NR_046563, exon 3 of 3) 19742 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr6-8045 chr6 120069385 120069595 + 7.54 0.000 Intergenic L1MA2|LINE|L1 54311 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr10-7763 chr10 33884726 33884936 + 7.54 0.000 Intergenic Intergenic -112151 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr17-6908 chr17 34760952 34761162 + 7.54 0.000 Intergenic Intergenic 180308 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr2-5302 chr2 70918185 70918395 + 7.54 0.000 intron (NM_012476, intron 1 of 2) intron (NM_012476, intron 1 of 2) -17610 NM_001692 525 Hs.64173 NM_001692 ENSG00000116039 ATP6V1B1 ATP6B1|RTA1B|VATB|VMA2|VPP3 ATPase H+ transporting V1 subunit B1 protein-coding chrX-1397 chrX 3031199 3031409 + 7.54 0.000 intron (NM_001011719, intron 8 of 8) intron (NM_001011719, intron 8 of 8) -8930 NM_001201538 416 Hs.101674 NM_004042 ENSG00000062096 ARSF ASF arylsulfatase F protein-coding chrX-1829 chrX 102892810 102893020 + 7.54 0.000 intron (NR_146584, intron 14 of 18) L1MC5a|LINE|L1 -44357 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr7-7929 chr7 8691897 8692107 + 7.54 0.000 intron (NM_152745, intron 2 of 2) L2a|LINE|L2 258393 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr7-8172 chr7 30313591 30313801 + 7.54 0.000 intron (NM_147128, intron 1 of 4) intron (NM_147128, intron 1 of 4) -23806 NR_037513 100500883 NR_037513 ENSG00000283237 MIR550B1 - microRNA 550b-1 ncRNA chr7-7488 chr7 99754616 99754826 + 7.54 0.000 Intergenic L1MA2|LINE|L1 -19525 NM_001256497 100861540 NM_001256497 ENSG00000282301 CYP3A7-CYP3A51P CYP3A7|CYP3A7-3AP1|CYP3A7-CYP3AP1|CYP3A7.1L|CYPIIIA7 CYP3A7-CYP3A51P readthrough protein-coding chr1-11385 chr1 47508702 47508912 + 7.54 0.000 Intergenic Intergenic -71490 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr6-5374 chr6 151011480 151011690 + 7.54 0.000 intron (NM_001350486, intron 21 of 27) intron (NM_001350486, intron 21 of 27) 4577 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr11-9581 chr11 65053798 65054008 + 7.54 0.000 intron (NM_005468, intron 6 of 17) intron (NM_005468, intron 6 of 17) 4650 NM_005468 10004 Hs.13967 NM_005468 ENSG00000168060 NAALADL1 I100|NAALADASEL N-acetylated alpha-linked acidic dipeptidase like 1 protein-coding chr9-5677 chr9 123800943 123801153 + 7.54 0.000 intron (NM_001352968, intron 2 of 18) intron (NM_001352968, intron 2 of 18) 129078 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr20-3528 chr20 645472 645682 + 7.54 0.000 Intergenic Intergenic 7623 NM_080725 140809 Hs.516830 NM_080725 ENSG00000271303 SRXN1 C20orf139|Npn3|SRX|SRX1 sulfiredoxin 1 protein-coding chr10-2436 chr10 4384320 4384530 + 7.54 0.000 non-coding (NR_108054, exon 1 of 3) non-coding (NR_108054, exon 1 of 3) 179 NR_108055 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr21-1621 chr21 20299365 20299575 + 7.54 0.000 Intergenic Intergenic -40785 NR_151724 111216285 Hs.561034 NR_151724 LINC02573 - long intergenic non-protein coding RNA 2573 ncRNA chr11-9058 chr11 29389622 29389832 + 7.54 0.000 Intergenic L1PA16|LINE|L1 -204686 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr1-10550 chr1 171853708 171853918 + 7.54 0.000 intron (NM_001278252, intron 1 of 14) intron (NM_001278252, intron 1 of 14) -10379 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 - DNM3 intronic transcript 1 ncRNA chr9-7664 chr9 69193077 69193287 + 7.54 0.000 intron (NM_001369871, intron 3 of 24) AluJb|SINE|Alu -11829 NM_001170415 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr9-4851 chr9 738500 738710 + 7.54 0.000 intron (NM_001354331, intron 7 of 10) intron (NM_001354331, intron 7 of 10) 31928 NM_001354344 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr9-6213 chr9 104094932 104095142 + 7.54 0.000 intron (NM_001042550, intron 1 of 24) L2a|LINE|L2 410 NM_001042550 10592 Hs.119023 NM_006444 ENSG00000136824 SMC2 CAP-E|CAPE|SMC-2|SMC2L1 structural maintenance of chromosomes 2 protein-coding chr3-6236 chr3 66722911 66723121 + 7.54 0.000 Intergenic Intergenic 15320 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr14-3628 chr14 64726959 64727169 + 7.54 0.000 intron (NM_001308147, intron 1 of 16) MIRb|SINE|MIR 22640 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr8-7557 chr8 144834171 144834381 + 7.54 0.000 intron (NM_001349808, intron 3 of 4) L1M5|LINE|L1 6716 NM_001349807 7553 Hs.493218 NM_003416 ENSG00000147789 ZNF7 HF.16|KOX4|zf30 zinc finger protein 7 protein-coding chr8-6305 chr8 43201868 43202078 + 7.54 0.000 3' UTR (NM_001363229, exon 17 of 17) 3' UTR (NM_001363229, exon 17 of 17) 61509 NM_001363228 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr1-10210 chr1 113838898 113839108 + 7.54 0.000 intron (NM_012411, intron 9 of 18) L2a|LINE|L2 -17632 NR_037864 100287722 Hs.664669 NR_037864 ENSG00000226167 AP4B1-AS1 - AP4B1 antisense RNA 1 ncRNA chr22-1700 chr22 50161915 50162125 + 7.54 0.000 TTS (NM_001164104) TTS (NM_001164104) -8711 NR_027691 56666 Hs.440092 NM_052839 ENSG00000073150 PANX2 PX2|hPANX2 pannexin 2 protein-coding chr15-2712 chr15 89675268 89675478 + 7.54 0.000 intron (NM_001145311, intron 2 of 8) AluJr|SINE|Alu 3994 NM_001145311 5346 Hs.103253 NM_002666 ENSG00000166819 PLIN1 FPLD4|PERI|PLIN perilipin 1 protein-coding chr6-6704 chr6 544096 544306 + 7.54 0.000 intron (NM_018303, intron 22 of 27) intron (NM_018303, intron 22 of 27) 112763 NM_148959 135458 Hs.669039 NM_148959 ENSG00000188996 HUS1B - HUS1 checkpoint clamp component B protein-coding chr16-6725 chr16 72878386 72878596 + 7.54 0.000 intron (NM_001164766, intron 3 of 8) intron (NM_001164766, intron 3 of 8) 169637 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr18-3030 chr18 26962641 26962851 + 7.54 0.000 intron (NM_031422, intron 4 of 5) intron (NM_031422, intron 4 of 5) -96943 NM_001317384 361 Hs.315369 NM_001650 ENSG00000171885 AQP4 MIWC|WCH4 aquaporin 4 protein-coding chr1-11524 chr1 157071078 157071288 + 7.54 0.000 Intergenic Intergenic -25441 NM_198236 9826 Hs.516954 NM_014784 ENSG00000132694 ARHGEF11 GTRAP48|PDZ-RHOGEF Rho guanine nucleotide exchange factor 11 protein-coding chr7-5772 chr7 76149780 76149990 + 7.54 0.000 Intergenic Intergenic -41123 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr1-6124 chr1 158039471 158039681 + 7.54 0.000 intron (NM_001286349, intron 1 of 12) intron (NM_001286349, intron 1 of 12) 14026 NR_145471 100505785 Hs.664656 NR_145471 KIRREL1-IT1 KIRREL-IT1 KIRREL1 intronic transcript 1 ncRNA chrX-4332 chrX 46080947 46081157 + 7.54 0.000 Intergenic L1MEi|LINE|L1 -229562 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr3-4306 chr3 161148734 161148944 + 7.54 0.000 Intergenic MER41-int|LTR|ERV1 -43467 NM_001349138 8706 Hs.418062 NM_003781 ENSG00000169255 B3GALNT1 B3GALT3|GLCT3|GLOB|Gb4Cer|P|P1|beta3Gal-T3|galT3 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) protein-coding chr8-3472 chr8 98951509 98951719 + 7.54 0.000 exon (NM_001286841, exon 5 of 5) exon (NM_001286841, exon 5 of 5) 7172 NM_001142462 116039 Hs.253247 NM_053001 ENSG00000164920 OSR2 - odd-skipped related transciption factor 2 protein-coding chr2-6451 chr2 158079586 158079796 + 7.54 0.000 intron (NM_001135098, intron 2 of 8) intron (NM_001135098, intron 2 of 8) -22179 NM_173355 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr6-7732 chr6 90406990 90407200 + 7.54 0.000 Intergenic Intergenic 94353 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr17-3991 chr17 67790215 67790425 + 7.54 0.000 Intergenic L1P5|LINE|L1 -35183 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr7-7551 chr7 115048120 115048330 + 7.54 0.000 Intergenic Intergenic -30733 NR_120521 102724386 Hs.352357 NR_120521 ENSG00000225535 LINC01393 - long intergenic non-protein coding RNA 1393 ncRNA chr1-10387 chr1 156358797 156359007 + 7.54 0.000 Intergenic Intergenic -10309 NM_001256395 57127 Hs.131835 NM_020407 ENSG00000132677 RHBG SLC42A2 Rh family B glycoprotein (gene/pseudogene) protein-coding chr2-2727 chr2 111659588 111659798 + 7.54 0.000 Intergenic MER21C|LTR|ERVL 111441 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr5-8394 chr5 125059434 125059644 + 7.54 0.000 intron (NR_109882, intron 2 of 5) intron (NR_109882, intron 2 of 5) 22708 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr4-5061 chr4 143319913 143320123 + 7.54 0.000 Intergenic Intergenic -16858 NM_002039 2549 Hs.80720 NM_002039 ENSG00000109458 GAB1 DFNB26 GRB2 associated binding protein 1 protein-coding chr2-11040 chr2 110874771 110874981 + 7.54 0.000 intron (NM_001371254, intron 10 of 18) MER5A|DNA|hAT-Charlie 142303 NM_001371254 chr7-8674 chr7 72691244 72691454 + 7.54 0.000 intron (NM_001145440, intron 11 of 13) intron (NM_001145440, intron 11 of 13) -6554 NR_039793 100616310 NR_039793 ENSG00000266525 MIR4650-1 - microRNA 4650-1 ncRNA chr8-2106 chr8 141202254 141202464 + 7.54 0.000 Intergenic SVA_D|Retroposon|SVA 26215 NM_001286648 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr17-3615 chr17 1522703 1522913 + 7.54 0.000 intron (NM_006224, intron 10 of 11) L2a|LINE|L2 5889 NR_028514 100306951 Hs.633815 NR_028514 ENSG00000236618 PITPNA-AS1 - PITPNA antisense RNA 1 ncRNA chr1-10708 chr1 192902507 192902717 + 7.54 0.000 Intergenic L2a|LINE|L2 45645 NR_126003 102724954 Hs.243488 NR_126003 LINC01032 - long intergenic non-protein coding RNA 1032 ncRNA chr11-7419 chr11 103246233 103246443 + 7.54 0.000 intron (NM_001377, intron 65 of 88) intron (NM_001377, intron 65 of 88) 136912 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chrX-3417 chrX 12502680 12502890 + 7.54 0.000 intron (NM_001368400, intron 1 of 15) (TAGATA)n|Simple_repeat|Simple_repeat 4105 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr9-4933 chr9 13696134 13696344 + 7.54 0.000 Intergenic L1PA13|LINE|L1 -231732 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr3-6756 chr3 141178513 141178723 + 7.54 0.000 Intergenic Intergenic -53207 NM_001282728 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr18-2992 chr18 24408857 24409067 + 7.54 0.000 Intergenic L2c|LINE|L2 -11138 NM_080597 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr3-6845 chr3 149198548 149198758 + 7.54 0.000 intron (NM_000096, intron 8 of 18) intron (NM_000096, intron 8 of 18) 23176 NM_000096 1356 Hs.558314 NM_000096 ENSG00000047457 CP CP-2 ceruloplasmin protein-coding chr12-6525 chr12 110023905 110024115 + 7.54 0.000 intron (NM_033121, intron 6 of 14) intron (NM_033121, intron 6 of 14) 24580 NM_033121 88455 Hs.528703 NM_033121 ENSG00000076513 ANKRD13A ANKRD13|NY-REN-25 ankyrin repeat domain 13A protein-coding chr20-4084 chr20 39461517 39461727 + 7.54 0.000 Intergenic MER20|DNA|hAT-Charlie -236874 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chrX-4124 chrX 26577507 26577717 + 7.54 0.000 Intergenic MSTB|LTR|ERVL-MaLR 19275 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr11-9814 chr11 71336053 71336263 + 7.54 0.000 Intergenic Intergenic 87196 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr14-2405 chr14 58907896 58908106 + 7.54 0.000 intron (NR_110547, intron 2 of 5) L1PB4|LINE|L1 79713 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr1-9408 chr1 31828299 31828509 + 7.54 0.000 Intergenic Intergenic -12353 NM_144569 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chr6-7127 chr6 35596424 35596634 + 7.54 0.000 intron (NM_001145775, intron 7 of 11) intron (NM_001145775, intron 7 of 11) 68260 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr22-1998 chr22 26853149 26853359 + 7.54 0.000 Intergenic Intergenic -6957 NR_146604 110091768 Hs.639900 NR_146604 LOC110091768 - uncharacterized LOC110091768 ncRNA chr7-8236 chr7 34869353 34869563 + 7.54 0.000 intron (NM_207173, intron 8 of 8) L2b|LINE|L2 -35127 NR_015356 404744 Hs.487951 NM_207283 ENSG00000197085 NPSR1-AS1 AAA1 NPSR1 antisense RNA 1 ncRNA chr9-4732 chr9 129155396 129155606 + 7.54 0.000 Intergenic MIRb|SINE|MIR 22760 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr2-4543 chr2 45908712 45908922 + 7.54 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 257142 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr16-6509 chr16 60497557 60497767 + 7.54 0.000 Intergenic Intergenic -137869 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr8-6817 chr8 97068980 97069190 + 7.54 0.000 intron (NM_016134, intron 7 of 7) intron (NM_016134, intron 7 of 7) 208843 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr13-4482 chr13 113470106 113470316 + 7.54 0.000 intron (NM_001014283, intron 4 of 6) Tigger3a|DNA|TcMar-Tigger -16723 NM_138430 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding chr18-2563 chr18 6892681 6892891 + 7.54 0.000 intron (NM_001010000, intron 13 of 16) L1MB2|LINE|L1 37083 NR_034100 400643 Hs.253920 NM_001103383 ENSG00000265933 LINC00668 - long intergenic non-protein coding RNA 668 ncRNA chr6-7190 chr6 38879743 38879953 + 7.54 0.000 intron (NM_001371, intron 52 of 91) L1M4|LINE|L1 73259 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr2-5079 chr2 10494730 10494940 + 7.54 0.000 Intergenic Intergenic 45107 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr3-6713 chr3 134655265 134655475 + 7.54 0.000 Intergenic Intergenic -4348 NM_001350859 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr7-8429 chr7 46997437 46997647 + 7.54 0.000 Intergenic L2|LINE|L2 -300420 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr2-12653 chr2 74252130 74252340 + 7.54 0.000 exon (NM_021196, exon 11 of 26) exon (NM_021196, exon 11 of 26) 53620 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr2-3584 chr2 50144097 50144307 + 7.54 0.000 intron (NM_001330093, intron 18 of 22) intron (NM_001330093, intron 18 of 22) -169999 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr10-4101 chr10 67138439 67138649 + 7.54 0.000 intron (NM_001127384, intron 7 of 17) intron (NM_001127384, intron 7 of 17) 126278 NR_111909 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr1-5012 chr1 69982877 69983087 + 7.54 0.000 intron (NM_001370785, intron 9 of 26) intron (NM_001370785, intron 9 of 26) 63660 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chr12-5257 chr12 109587568 109587778 + 7.54 0.000 intron (NM_000431, intron 7 of 10) intron (NM_000431, intron 7 of 10) 13879 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr22-2072 chr22 50018499 50018709 + 7.54 0.000 TTS (NM_001350317) TTS (NM_001350317) -5839 NM_001371417 chr1-9678 chr1 50305576 50305786 + 7.54 0.000 Intergenic MIR|SINE|MIR 117762 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chrX-4398 chrX 52471060 52471270 + 7.54 0.000 Intergenic Intergenic -24503 NM_001097604 653067 Hs.112208 NM_020411 ENSG00000204382 XAGE1B CT12.1|CT12.1C|CT12.1D|CT12.1E|CT12.1b|CTP9|GAGED2|XAGE-1|XAGE1|XAGE1C|XAGE1D|XAGE1E X antigen family member 1B protein-coding chr14-2498 chr14 102752728 102752938 + 7.54 0.000 Intergenic Intergenic -24616 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr8-4381 chr8 102644980 102645190 + 7.54 0.000 Intergenic Intergenic 8879 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr8-1988 chr8 81763768 81763978 + 7.54 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 31425 NM_152284 92421 Hs.183861 NM_152284 ENSG00000164695 CHMP4C SNF7-3|Shax3|VPS32C charged multivesicular body protein 4C protein-coding chr15-4704 chr15 66679138 66679348 + 7.54 0.000 intron (NR_110372, intron 3 of 4) MIRc|SINE|MIR -22993 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr19-3919 chr19 46518393 46518603 + 7.54 0.000 TTS (NM_001370551) TTS (NM_001370551) -22631 NM_020709 57469 Hs.7193 NM_020709 ENSG00000204851 PNMA8B PNMAL2 PNMA family member 8B protein-coding chr7-5932 chr7 99592777 99592987 + 7.54 0.000 Intergenic SATR1|Satellite|Satellite -5385 NM_001195542 100289187 Hs.729333 NM_001195541 ENSG00000244219 TMEM225B GS1-259H13.2 transmembrane protein 225B protein-coding chrX-5396 chrX 152024406 152024616 + 7.54 0.000 Intergenic MER1B|DNA|hAT-Charlie -49835 NM_004961 2564 Hs.22785 NM_004961 ENSG00000102287 GABRE - gamma-aminobutyric acid type A receptor epsilon subunit protein-coding chr5-7136 chr5 1888792 1889002 + 7.54 0.000 intron (NR_109912, intron 2 of 3) intron (NR_109912, intron 2 of 3) 1566 NR_109912 101929081 Hs.519180 NR_109912 ENSG00000249326 CTD-2194D22.4 - uncharacterized LOC101929081 ncRNA chr17-5200 chr17 15063738 15063948 + 7.54 0.000 Intergenic MIR|SINE|MIR 32868 NR_033371 94150 Hs.147654 NR_033371 ENSG00000259944 CDRT7 LINC00025|NCRNA00025 CMT1A duplicated region transcript 7 ncRNA chr15-4999 chr15 80747844 80748054 + 7.54 0.000 intron (NM_021214, intron 1 of 2) intron (NM_021214, intron 1 of 2) -31421 NM_001293298 57214 Hs.459088 NM_018689 ENSG00000103888 CEMIP CCSP1|HYBID|KIAA1199|TMEM2L cell migration inducing hyaluronidase 1 protein-coding chr1-12926 chr1 118165424 118165634 + 7.54 0.000 intron (NM_206996, intron 1 of 48) intron (NM_206996, intron 1 of 48) 19699 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr7-4029 chr7 153044337 153044547 + 7.54 0.000 Intergenic Intergenic 284690 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr10-7181 chr10 106631483 106631693 + 7.54 0.000 intron (NM_001206569, intron 18 of 25) intron (NM_001206569, intron 18 of 25) 491423 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr3-4560 chr3 147491295 147491505 + 7.54 0.000 intron (NR_121655, intron 1 of 2) intron (NR_121655, intron 1 of 2) 70073 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr1-13232 chr1 216049918 216050128 + 7.54 0.000 intron (NM_206933, intron 30 of 71) intron (NM_206933, intron 30 of 71) -22442 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr6-3486 chr6 11318432 11318642 + 7.54 0.000 intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 63811 NM_001142393 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr8-3929 chr8 42325293 42325503 + 7.54 0.000 intron (NR_033819, intron 18 of 20) intron (NR_033819, intron 18 of 20) -13096 NM_002690 5423 Hs.654484 NM_002690 ENSG00000070501 POLB - DNA polymerase beta protein-coding chr2-13394 chr2 139064169 139064379 + 7.54 0.000 Intergenic Intergenic 166950 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr16-6188 chr16 26502411 26502621 + 7.54 0.000 Intergenic AluSz6|SINE|Alu 477279 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr14-3626 chr14 62546807 62547017 + 7.54 0.000 Intergenic L1PA13|LINE|L1 -406939 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr11-4903 chr11 61777276 61777486 + 7.54 0.000 exon (NM_001127392, exon 12 of 27) exon (NM_001127392, exon 12 of 27) 15180 NR_030342 693196 NR_030342 ENSG00000284108 MIR611 MIRN611|hsa-mir-611 microRNA 611 ncRNA chr10-5897 chr10 118447390 118447600 + 7.54 0.000 Intergenic Intergenic 90387 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr7-6140 chr7 123975554 123975764 + 7.54 0.000 Intergenic Intergenic -18963 NR_133947 105375483 Hs.435972 NR_133947 ENSG00000241345 LOC105375483 - uncharacterized LOC105375483 ncRNA chr7-4944 chr7 137930738 137930948 + 7.54 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 2145 NM_001318246 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr3-10337 chr3 127368547 127368757 + 7.54 0.000 intron (NR_110147, intron 1 of 4) LTR33|LTR|ERVL 22018 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chrX-2910 chrX 151163917 151164127 + 7.54 0.000 Intergenic L2-3_Crp|LINE|L2 -4200 NR_036256 100422930 NR_036256 ENSG00000265789 MIR4330 - microRNA 4330 ncRNA chr3-6296 chr3 73924986 73925196 + 7.54 0.000 Intergenic Intergenic 115847 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr4-6761 chr4 6467141 6467351 + 7.54 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) 5368 NM_020416 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr11-10224 chr11 98815102 98815312 + 7.54 0.000 Intergenic Intergenic -205742 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr15-2125 chr15 71986689 71986899 + 7.54 0.000 intron (NM_006901, intron 11 of 41) Tigger3b|DNA|TcMar-Tigger -127464 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr18-2201 chr18 62019814 62020024 + 7.54 0.000 Intergenic L1MEc|LINE|L1 -126912 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr6-4692 chr6 55216561 55216771 + 7.54 0.000 intron (NM_001526, intron 2 of 7) MSTC-int|LTR|ERVL-MaLR 110206 NM_001526 3062 Hs.151624 NM_001526 ENSG00000137252 HCRTR2 OX2R hypocretin receptor 2 protein-coding chr5-4158 chr5 95556103 95556313 + 7.54 0.000 intron (NM_198150, intron 1 of 7) intron (NM_198150, intron 1 of 7) 1107 NM_198150 153642 Hs.585051 NM_198150 ENSG00000164291 ARSK TSULF arylsulfatase family member K protein-coding chr2-8053 chr2 72562699 72562909 + 7.54 0.000 intron (NR_135774, intron 7 of 19) intron (NR_135774, intron 7 of 19) 263229 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr10-4368 chr10 35356806 35357016 + 7.54 0.000 intron (NM_001282852, intron 1 of 8) L2a|LINE|L2 20037 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr11-8186 chr11 64071516 64071726 + 7.54 0.000 intron (NM_014067, intron 3 of 10) MIR1_Amn|SINE|MIR -32269 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr7-6678 chr7 151201237 151201447 + 7.54 0.000 intron (NM_001304419, intron 4 of 18) intron (NM_001304419, intron 4 of 18) 4154 NM_001304419 392843 Hs.649589 NM_001304419 ENSG00000278685 IQCA1L IQCA1P1 IQ motif containing with AAA domain 1 like protein-coding chr15-5061 chr15 85275180 85275390 + 7.54 0.000 Intergenic Intergenic 34934 NM_001310153 100133220 Hs.454625 NM_001310153 GOLGA6L3 - golgin A6 family like 3 protein-coding chr18-1273 chr18 58526377 58526587 + 7.54 0.000 intron (NM_052947, intron 6 of 12) intron (NM_052947, intron 6 of 12) -74138 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr7-5802 chr7 81191112 81191322 + 7.54 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -268828 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr2-13550 chr2 152918945 152919155 + 7.54 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 200413 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr12-4627 chr12 41961158 41961368 + 7.54 0.000 Intergenic Intergenic 183611 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr10-5812 chr10 109934977 109935187 + 7.54 0.000 Intergenic Intergenic -11529 NM_001167604 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr8-4633 chr8 133516919 133517129 + 7.54 0.000 intron (NM_003033, intron 2 of 8) intron (NM_003033, intron 2 of 8) 54863 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr5-8852 chr5 152397513 152397723 + 7.54 0.000 intron (NM_020167, intron 2 of 3) Charlie4z|DNA|hAT-Charlie 7661 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr16-4679 chr16 79065599 79065809 + 7.54 0.000 intron (NM_001291997, intron 7 of 7) LTR8B|LTR|ERV1 535033 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr7-5383 chr7 32362492 32362702 + 7.54 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) -63269 NM_001322058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr9-6540 chr9 114334509 114334719 + 7.54 0.000 3' UTR (NM_001317950, exon 22 of 22) 3' UTR (NM_001317950, exon 22 of 22) 4825 NM_000608 5005 Hs.719954 NM_000608 ENSG00000228278 ORM2 AGP-B|AGP-B'|AGP2 orosomucoid 2 protein-coding chr10-5955 chr10 122696675 122696885 + 7.54 0.000 TTS (NM_001010912) TTS (NM_001010912) 3066 NM_001010912 399814 Hs.363649 NM_001010912 ENSG00000183559 C10orf120 bA318C4.1 chromosome 10 open reading frame 120 protein-coding chr14-5045 chr14 80906850 80907060 + 7.54 0.000 intron (NM_152446, intron 4 of 24) intron (NM_152446, intron 4 of 24) 34783 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr7-5836 chr7 86959344 86959554 + 7.54 0.000 intron (NM_001291990, intron 2 of 21) L1M3|LINE|L1 6450 NM_152748 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chrX-2875 chrX 145745277 145745487 + 7.54 0.000 Intergenic L1M1|LINE|L1 -72447 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr14-1907 chr14 104433582 104433792 + 7.54 0.000 Intergenic Intergenic -146077 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr17-8339 chr17 73511287 73511497 + 7.54 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) -2291 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr16-3259 chr16 88005009 88005219 + 7.54 0.000 intron (NM_001173539, intron 5 of 12) intron (NM_001173539, intron 5 of 12) 35096 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr3-10428 chr3 131421106 131421316 + 7.54 0.000 Intergenic MER89|LTR|ERV1 39437 NM_152395 131870 Hs.282050 NM_152395 ENSG00000198585 NUDT16 - nudix hydrolase 16 protein-coding chr3-4858 chr3 159190373 159190583 + 7.54 0.000 intron (NM_001197113, intron 1 of 10) L2b|LINE|L2 -82769 NM_001197107 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr4-5526 chr4 107429234 107429444 + 7.54 0.000 Intergenic Intergenic 290895 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr7-4385 chr7 79504984 79505194 + 7.54 0.000 Intergenic MER76|LTR|ERVL 51129 NR_038343 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr9-8054 chr9 97268674 97268884 + 7.54 0.000 intron (NR_036529, intron 4 of 44) intron (NR_036529, intron 4 of 44) -30037 NR_136286 101926917 Hs.638367 NR_136286 ANKRD18CP - ankyrin repeat domain 18C, pseudogene pseudo chr9-7850 chr9 84591333 84591543 + 7.54 0.000 Intergenic Intergenic -77020 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr5-3001 chr5 4977018 4977228 + 7.54 0.000 Intergenic Intergenic -57236 NR_026994 340094 Hs.665092 NR_026994 ENSG00000215231 LINC01020 - long intergenic non-protein coding RNA 1020 ncRNA chr19-5399 chr19 12914217 12914427 + 7.54 0.000 intron (NM_001105578, intron 2 of 5) MER63A|DNA|hAT-Blackjack 4971 NM_001105578 256126 Hs.655173 NM_001105578 ENSG00000161860 SYCE2 CESC1 synaptonemal complex central element protein 2 protein-coding chr19-5434 chr19 19333691 19333901 + 7.54 0.000 intron (NM_015329, intron 1 of 18) intron (NM_015329, intron 1 of 18) 12967 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chr3-6285 chr3 72317556 72317766 + 7.54 0.000 Intergenic MER102b|DNA|hAT-Charlie 128962 NM_012234 23429 Hs.7910 NM_012234 ENSG00000163602 RYBP AAP1|APAP-1|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding chr3-4481 chr3 52290222 52290432 + 7.54 0.000 promoter-TSS (NR_046719) promoter-TSS (NR_046719) -594 NR_046719 100874110 Hs.608690 NR_046719 GLYCTK-AS1 - GLYCTK antisense RNA 1 ncRNA chr5-3843 chr5 120152477 120152687 + 7.54 0.000 Intergenic MER44C|DNA|TcMar-Tigger -311696 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr14-4402 chr14 30162137 30162347 + 7.54 0.000 Intergenic Intergenic -234395 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr13-4356 chr13 104142645 104142855 + 7.54 0.000 Intergenic Intergenic 717550 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr7-5556 chr7 46288997 46289207 + 7.54 0.000 Intergenic MIRc|SINE|MIR -367830 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chrX-1395 chrX 155136824 155137034 + 7.54 0.000 Intergenic Intergenic -60078 NM_001303544 7411 Hs.436803 NM_003372 ENSG00000155959 VBP1 HIBBJ46|PFD3|PFDN3|VBP-1 VHL binding protein 1 protein-coding chr7-8466 chr7 48423960 48424170 + 7.54 0.000 intron (NM_152701, intron 41 of 61) intron (NM_152701, intron 41 of 61) 252607 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr11-7271 chr11 26438567 26438777 + 7.54 0.000 intron (NM_031418, intron 1 of 26) AluSq|SINE|Alu -35230 NM_001313727 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr7-5443 chr7 38341132 38341342 + 7.54 0.000 promoter-TSS (NR_040085) promoter-TSS (NR_040085) -340 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr11-7107 chr11 123221206 123221416 + 7.54 0.000 Intergenic L2c|LINE|L2 -26063 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr5-4542 chr5 17057705 17057915 + 7.54 0.000 Intergenic Intergenic 98182 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr8-4946 chr8 110958028 110958238 + 7.54 0.000 intron (NR_125417, intron 5 of 5) MamGypsy2-I|LTR|Gypsy 69300 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr11-6303 chr11 61622431 61622641 + 7.54 0.000 intron (NR_002775, intron 1 of 4) intron (NR_002775, intron 1 of 4) 7500 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr7-8874 chr7 90533020 90533230 + 7.54 0.000 Intergenic Intergenic -63196 NM_001287135 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr4-5907 chr4 139817727 139817937 + 7.54 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 152013 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr4-6576 chr4 188886002 188886212 + 7.54 0.000 Intergenic Intergenic 109450 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr3-10999 chr3 179750608 179750818 + 7.54 0.000 intron (NM_003940, intron 13 of 20) MIRc|SINE|MIR 97673 NM_003940 8975 Hs.175322 NM_003940 ENSG00000058056 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 protein-coding chr5-3004 chr5 5499461 5499671 + 7.54 0.000 Intergenic Intergenic 76889 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr6-8307 chr6 144232187 144232397 + 7.54 0.000 Intergenic UCON89|DNA|hAT? -59445 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr6-7808 chr6 99835342 99835552 + 7.54 0.000 Intergenic MSTD|LTR|ERVL-MaLR -158591 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr22-2869 chr22 45205183 45205393 + 7.54 0.000 exon (NM_015264, exon 5 of 10) exon (NM_015264, exon 5 of 10) -4269 NR_031651 100302149 NR_031651 ENSG00000221598 MIR1249 MIRN1249|hsa-mir-1249 microRNA 1249 ncRNA chr12-4619 chr12 40838595 40838805 + 7.54 0.000 intron (NM_001256064, intron 1 of 15) L1M2|LINE|L1 10762 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr20-2574 chr20 37384260 37384470 + 7.54 0.000 exon (NM_005417, exon 4 of 14) exon (NM_005417, exon 4 of 14) 38237 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr6-6334 chr6 51874096 51874306 + 7.54 0.000 intron (NM_138694, intron 46 of 66) intron (NM_138694, intron 46 of 66) 213412 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding chr1-13093 chr1 182608851 182609061 + 7.54 0.000 Intergenic Intergenic -4567 NM_002928 6004 Hs.413297 NM_002928 ENSG00000143333 RGS16 A28-RGS14|A28-RGS14P|RGS-R regulator of G protein signaling 16 protein-coding chr10-5622 chr10 95210862 95211072 + 7.54 0.000 intron (NM_207321, intron 5 of 10) intron (NM_207321, intron 5 of 10) 16767 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr2-11167 chr2 149441311 149441521 + 7.54 0.000 intron (NM_194317, intron 2 of 4) intron (NM_194317, intron 2 of 4) 110829 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr7-7869 chr7 5541150 5541360 + 7.54 0.000 Intergenic MIRb|SINE|MIR -10654 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr3-10876 chr3 169408303 169408513 + 7.54 0.000 intron (NM_001366473, intron 1 of 15) intron (NM_001366473, intron 1 of 15) -39459 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr6-4431 chr6 33857886 33858096 + 7.54 0.000 Intergenic Intergenic 38916 NR_038989 100507584 Hs.547104 NR_038989 ENSG00000249346 LINC01016 - long intergenic non-protein coding RNA 1016 ncRNA chr1-7960 chr1 186828944 186829154 + 7.54 0.000 promoter-TSS (NM_001311193) promoter-TSS (NM_001311193) 100 NM_001311193 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr17-5073 chr17 3957602 3957812 + 7.54 0.000 intron (NM_174955, intron 1 of 21) intron (NM_174955, intron 1 of 21) 6730 NM_174958 489 Hs.513870 NM_005173 ENSG00000074370 ATP2A3 SERCA3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 protein-coding chr19-4071 chr19 11111726 11111936 + 7.54 0.000 intron (NM_001195803, intron 7 of 15) intron (NM_001195803, intron 7 of 15) -1643 NR_106946 102465534 NR_106946 ENSG00000284553 MIR6886 hsa-mir-6886 microRNA 6886 ncRNA chr1-5945 chr1 25537536 25537746 + 7.54 0.000 Intergenic Intergenic -5944 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr2-9949 chr2 925770 925980 + 7.54 0.000 Intergenic Intergenic -20424 NR_110179 101060385 Hs.385965 NR_110179 ENSG00000228799 LINC01939 - long intergenic non-protein coding RNA 1939 ncRNA chr16-5484 chr16 6842512 6842722 + 7.54 0.000 intron (NM_001142334, intron 1 of 13) L1ME4b|LINE|L1 68808 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr6-4264 chr6 10289291 10289501 + 7.54 0.000 Intergenic Intergenic -115106 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr4-5844 chr4 108193768 108193978 + 7.54 0.000 Intergenic Intergenic 21753 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr7-9217 chr7 117670533 117670743 + 7.54 0.000 Intergenic MER4CL34|LTR|ERV1 -105962 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr13-4150 chr13 85093753 85093963 + 7.54 0.000 intron (NR_126383, intron 1 of 5) intron (NR_126383, intron 1 of 5) 54199 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr13-3216 chr13 24326326 24326536 + 7.54 0.000 Intergenic L1ME1|LINE|L1 -5019 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr6-6369 chr6 69108143 69108353 + 7.54 0.000 intron (NM_001704, intron 17 of 31) intron (NM_001704, intron 17 of 31) 472966 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr13-3746 chr13 42106969 42107179 + 7.54 0.000 intron (NM_178009, intron 1 of 29) intron (NM_178009, intron 1 of 29) -30968 NR_123715 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr17-5166 chr17 9762598 9762808 + 7.54 0.000 Intergenic L1ME3D|LINE|L1 28889 NM_001105571 201140 Hs.61684 NM_001105571 ENSG00000184544 DHRS7C SDR32C2 dehydrogenase/reductase 7C protein-coding chr11-9174 chr11 35392144 35392354 + 7.54 0.000 intron (NM_001252652, intron 1 of 11) intron (NM_001252652, intron 1 of 11) 27309 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr11-2509 chr11 68399520 68399730 + 7.54 0.000 intron (NM_002335, intron 7 of 22) intron (NM_002335, intron 7 of 22) -61127 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr10-5099 chr10 47366932 47367142 + 7.54 0.000 3' UTR (NM_153034, exon 2 of 2) 3' UTR (NM_153034, exon 2 of 2) 17256 NM_001346934 118738 Hs.27788 NM_153034 ENSG00000265763 ZNF488 - zinc finger protein 488 protein-coding chr2-9375 chr2 229676051 229676261 + 7.54 0.000 intron (NM_139072, intron 1 of 12) intron (NM_139072, intron 1 of 12) 38399 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr6-7853 chr6 105546953 105547163 + 7.54 0.000 Intergenic Intergenic -143976 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr10-4861 chr10 15178531 15178741 + 7.54 0.000 Intergenic AluSq2|SINE|Alu -9943 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr6-7627 chr6 78736868 78737078 + 7.54 0.000 Intergenic L1PA5|LINE|L1 -130578 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chr7-3148 chr7 68385060 68385270 + 7.54 0.000 Intergenic L1MEf|LINE|L1 364912 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr19-6253 chr19 7355404 7355614 + 7.54 0.000 intron (NM_001367823, intron 1 of 28) intron (NM_001367823, intron 1 of 28) 6572 NM_001367823 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr10-5236 chr10 64548157 64548367 + 7.54 0.000 Intergenic Intergenic -277266 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr5-8101 chr5 96963321 96963531 + 7.54 0.000 intron (NM_175920, intron 1 of 17) MLT1H|LTR|ERVL-MaLR 4993 NM_175920 4012 Hs.527199 NM_005575 ENSG00000113441 LNPEP CAP|IRAP|P-LAP|PLAP leucyl and cystinyl aminopeptidase protein-coding chr1-4062 chr1 207240958 207241168 + 7.54 0.000 Intergenic Intergenic -80615 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr17-5633 chr17 49646140 49646350 + 7.54 0.000 5' UTR (NM_001370731, exon 1 of 10) 5' UTR (NM_001370731, exon 1 of 10) 273 NM_001370731 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding chr20-1671 chr20 33554972 33555182 + 7.54 0.000 intron (NM_001032999, intron 1 of 10) MER57E1|LTR|ERV1 -7288 NM_001039709 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr9-7421 chr9 22311313 22311523 + 7.54 0.000 Intergenic L1M4|LINE|L1 -135406 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr3-8262 chr3 51634017 51634227 + 7.54 0.000 intron (NM_001322253, intron 10 of 23) intron (NM_001322253, intron 10 of 23) -37053 NR_024012 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr8-5836 chr8 5656962 5657172 + 7.54 0.000 Intergenic ERVL-E-int|LTR|ERVL -662153 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr2-7322 chr2 240817800 240818010 + 7.54 0.000 intron (NM_004321, intron 1 of 46) intron (NM_004321, intron 1 of 46) 2314 NM_001320705 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr7-9415 chr7 132322103 132322313 + 7.54 0.000 intron (NM_020911, intron 3 of 31) AluSz6|SINE|Alu 61347 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr3-5146 chr3 55468878 55469088 + 7.54 0.000 3' UTR (NM_001256105, exon 5 of 5) 3' UTR (NM_001256105, exon 5 of 5) 12415 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr3-6778 chr3 142829735 142829945 + 7.54 0.000 exon (NM_013363, exon 6 of 9) exon (NM_013363, exon 6 of 9) 59243 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr3-9987 chr3 99173144 99173354 + 7.54 0.000 Intergenic L1PREC2|LINE|L1 -271554 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr2-4363 chr2 10913724 10913934 + 7.54 0.000 exon (NM_002236, exon 1 of 1) exon (NM_002236, exon 1 of 1) 1895 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr9-7915 chr9 89178307 89178517 + 7.54 0.000 exon (NM_016848, exon 1 of 12) exon (NM_016848, exon 1 of 12) 406 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr8-6041 chr8 23996055 23996265 + 7.54 0.000 Intergenic L2b|LINE|L2 -141354 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr21-618 chr21 37463487 37463697 + 7.54 0.000 intron (NM_001347721, intron 2 of 11) intron (NM_001347721, intron 2 of 11) 43293 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr3-6077 chr3 52096928 52097138 + 7.54 0.000 intron (NM_015426, intron 9 of 10) intron (NM_015426, intron 9 of 10) -31921 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA chr5-9078 chr5 171700162 171700372 + 7.54 0.000 Intergenic Intergenic -85605 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr6-8375 chr6 149484573 149484783 + 7.54 0.000 intron (NM_207360, intron 1 of 5) intron (NM_207360, intron 1 of 5) 336 NM_207360 340152 Hs.632618 NM_207360 ENSG00000178199 ZC3H12D C6orf95|MCPIP4|TFL|dJ281H8.1|p34 zinc finger CCCH-type containing 12D protein-coding chr11-8398 chr11 94850055 94850265 + 7.54 0.000 exon (NM_001301007, exon 6 of 12) exon (NM_001301007, exon 6 of 12) 81804 NM_001301007 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr1-16299 chr1 215330654 215330864 + 7.54 0.000 Intergenic Intergenic -236545 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr8-3072 chr8 20522457 20522667 + 7.54 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 92364 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr22-2782 chr22 41701612 41701822 + 7.54 0.000 intron (NM_152513, intron 1 of 30) intron (NM_152513, intron 1 of 30) 2214 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr10-5484 chr10 80187886 80188096 + 7.54 0.000 intron (NM_001278408, intron 1 of 16) intron (NM_001278408, intron 1 of 16) 16500 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr2-11415 chr2 219066354 219066564 + 7.54 0.000 Intergenic Intergenic -5538 NM_002181 3549 Hs.654504 NM_002181 ENSG00000163501 IHH BDA1|HHG2 Indian hedgehog signaling molecule protein-coding chr11-10105 chr11 86773849 86774059 + 7.54 0.000 Intergenic Intergenic -17117 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr11-9253 chr11 42950063 42950273 + 7.54 0.000 Intergenic LTR12C|LTR|ERV1 319201 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo chr20-871 chr20 8930755 8930965 + 7.54 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 99675 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr18-3016 chr18 25978901 25979111 + 7.54 0.000 Intergenic Intergenic 111607 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr2-13435 chr2 142992992 142993202 + 7.54 0.000 intron (NM_001199241, intron 11 of 14) intron (NM_001199241, intron 11 of 14) 115433 NM_003937 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr4-7184 chr4 40785999 40786209 + 7.54 0.000 intron (NM_024677, intron 7 of 11) intron (NM_024677, intron 7 of 11) 36149 NM_024677 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr17-2571 chr17 63948747 63948957 + 7.54 0.000 intron (NM_000334, intron 15 of 23) intron (NM_000334, intron 15 of 23) -16521 NM_000626 974 Hs.89575 NM_000626 ENSG00000007312 CD79B AGM6|B29|IGB CD79b molecule protein-coding chr2-13710 chr2 166631743 166631953 + 7.54 0.000 Intergenic L1MA3|LINE|L1 -144877 NR_045628 6332 Hs.596087 NM_002976 ENSG00000136546 SCN7A NaG|Nav2.1|Nav2.2|SCN6A sodium voltage-gated channel alpha subunit 7 protein-coding chr1-5118 chr1 151707741 151707951 + 7.54 0.000 exon (NM_001291106, exon 6 of 13) exon (NM_001291106, exon 6 of 13) 8957 NM_007185 11189 Hs.26047 NM_007185 ENSG00000159409 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP Elav-like family member 3 protein-coding chr4-4872 chr4 114537402 114537612 + 7.54 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -60895 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr4-4118 chr4 6839384 6839594 + 7.54 0.000 intron (NM_001100590, intron 2 of 8) intron (NM_001100590, intron 2 of 8) 56757 NM_001100590 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr6-6233 chr6 22551346 22551556 + 7.54 0.000 Intergenic Intergenic -18115 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr18-2121 chr18 53100968 53101178 + 7.54 0.000 intron (NM_005215, intron 7 of 28) intron (NM_005215, intron 7 of 28) -136028 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr8-4084 chr8 67866658 67866868 + 7.54 0.000 Intergenic Intergenic -85283 NM_024870 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr6-3577 chr6 69576501 69576711 + 7.54 0.000 Intergenic Intergenic 219860 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr12-8380 chr12 132696149 132696359 + 7.54 0.000 intron (NM_018663, intron 3 of 4) AluJo|SINE|Alu 8667 NM_018663 5827 Hs.430299 NM_018663 ENSG00000176894 PXMP2 PMP22 peroxisomal membrane protein 2 protein-coding chr9-3282 chr9 38388994 38389204 + 7.54 0.000 Intergenic MIR3|SINE|MIR -3603 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr17-4160 chr17 82921915 82922125 + 7.54 0.000 intron (NM_005993, intron 25 of 38) intron (NM_005993, intron 25 of 38) -81998 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr1-5633 chr1 21864042 21864252 + 7.54 0.000 exon (NM_001291860, exon 37 of 97) exon (NM_001291860, exon 37 of 97) 51882 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr1-14462 chr1 47379675 47379885 + 7.54 0.000 TTS (NR_046394) TTS (NR_046394) -36505 NM_012186 2301 Hs.112968 NM_012186 ENSG00000186790 FOXE3 AAT11|ASGD2|CTRCT34|FKHL12|FREAC8 forkhead box E3 protein-coding chr7-7619 chr7 133187667 133187877 + 7.54 0.000 Intergenic Intergenic -65295 NM_001037126 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr12-6214 chr12 25603755 25603965 + 7.54 0.000 intron (NM_001352232, intron 1 of 10) intron (NM_001352232, intron 1 of 10) 44718 NM_001352232 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr8-5117 chr8 64940007 64940217 + 7.54 0.000 Intergenic MIRb|SINE|MIR -141375 NM_004820 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chrX-1318 chrX 130637952 130638162 + 7.54 0.000 intron (NM_006375, intron 10 of 14) intron (NM_006375, intron 10 of 14) 143116 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr15-4782 chr15 71078674 71078884 + 7.54 0.000 Intergenic Intergenic -62670 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr2-10331 chr2 156748475 156748685 + 7.54 0.000 Intergenic Intergenic 312201 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chrX-2793 chrX 133431255 133431465 + 7.54 0.000 Intergenic Intergenic -15871 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr7-8499 chr7 51839141 51839351 + 7.54 0.000 Intergenic L1PA3|LINE|L1 -445990 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr10-6052 chr10 127964794 127965004 + 7.54 0.000 5' UTR (NM_001316676, exon 2 of 22) 5' UTR (NM_001316676, exon 2 of 22) -22381 NM_001316677 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr1-16669 chr1 242691007 242691217 + 7.54 0.000 Intergenic L2c|LINE|L2 -166415 NM_001320272 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr2-6800 chr2 52583267 52583477 + 7.54 0.000 Intergenic THE1D|LTR|ERVL-MaLR 119243 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr7-5823 chr7 83864202 83864412 + 7.54 0.000 Intergenic Intergenic -215168 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr3-9158 chr3 33151082 33151292 + 7.54 0.000 3' UTR (NM_015551, exon 5 of 5) 3' UTR (NM_015551, exon 5 of 5) 37229 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr8-7395 chr8 139489848 139490058 + 7.54 0.000 Intergenic Intergenic 213170 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr3-10260 chr3 123749711 123749921 + 7.54 0.000 intron (NM_001321309, intron 4 of 32) MIRb|SINE|MIR 60172 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr15-3744 chr15 59695694 59695904 + 7.54 0.000 Intergenic AluSc|SINE|Alu -6479 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr14-5149 chr14 91017128 91017338 + 7.54 0.000 intron (NM_182398, intron 1 of 12) ERVL-B4-int|LTR|ERVL 42891 NM_001322237 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr22-4286 chr22 49686696 49686906 + 7.54 0.000 Intergenic Intergenic -29282 NM_001289922 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr14-5083 chr14 86287733 86287943 + 7.54 0.000 Intergenic L2a|LINE|L2 353160 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr1-11928 chr1 60342369 60342579 + 7.54 0.000 Intergenic Intergenic -268704 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr15-2973 chr15 51006972 51007182 + 7.54 0.000 Intergenic L1MC1|LINE|L1 -30411 NR_146310 109729174 NR_146310 ENSG00000259240 MIR4713HG - MIR4713 host gene ncRNA chr2-10476 chr2 218600746 218600956 + 7.54 0.000 Intergenic AluSx1|SINE|Alu -7048 NM_032726 84812 Hs.632528 NM_032726 ENSG00000115556 PLCD4 - phospholipase C delta 4 protein-coding chr9-3666 chr9 96686632 96686842 + 7.54 0.000 Intergenic Intergenic -31420 NM_153698 195827 Hs.44640 NM_153698 ENSG00000158122 PRXL2C AAED1|C9orf21 peroxiredoxin like 2C protein-coding chr12-7182 chr12 49417229 49417439 + 7.54 0.000 intron (NM_001293285, intron 3 of 14) intron (NM_001293285, intron 3 of 14) 28160 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr14-4068 chr14 61388122 61388332 + 7.54 0.000 intron (NM_006255, intron 1 of 13) MER112|DNA|hAT-Charlie 66784 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr8-7285 chr8 131117349 131117559 + 7.54 0.000 Intergenic L1MA1|LINE|L1 -76545 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr10-2882 chr10 101095734 101095944 + 7.54 0.000 intron (NR_130723, intron 2 of 2) intron (NR_130723, intron 2 of 2) 29540 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr9-7311 chr9 10428869 10429079 + 7.54 0.000 intron (NM_002839, intron 2 of 45) MIRb|SINE|MIR 184028 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr7-4373 chr7 73762170 73762380 + 7.54 0.000 Intergenic Intergenic 7995 NM_001306 1365 Hs.647023 NM_001306 ENSG00000165215 CLDN3 C7orf1|CPE-R2|CPETR2|HRVP1|RVP1 claudin 3 protein-coding chrX-1192 chrX 66365276 66365486 + 7.54 0.000 Intergenic L1PA12|LINE|L1 197631 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr9-6576 chr9 124151188 124151398 + 7.54 0.000 Intergenic Intergenic -106313 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr4-8204 chr4 134684099 134684309 + 7.54 0.000 Intergenic L1PA13|LINE|L1 260336 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr3-9648 chr3 60613814 60614024 + 7.54 0.000 intron (NM_001320900, intron 5 of 9) intron (NM_001320900, intron 5 of 9) 3951 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr9-5453 chr9 98133551 98133761 + 7.54 0.000 intron (NM_003389, intron 4 of 11) MER91C|DNA|hAT-Tip100 -14434 NM_014788 9830 Hs.575631 NM_014788 ENSG00000106785 TRIM14 - tripartite motif containing 14 protein-coding chr11-4349 chr11 73242824 73243034 + 7.54 0.000 TTS (NM_002564) TTS (NM_002564) -21576 NM_176797 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr10-7621 chr10 22302742 22302952 + 7.54 0.000 Intergenic Intergenic -13536 NM_001204062 100532731 Hs.380403 NM_001204062 ENSG00000269897 COMMD3-BMI1 BMI1|PCGF4|RNF51 COMMD3-BMI1 readthrough protein-coding chr12-7758 chr12 94752990 94753200 + 7.54 0.000 Intergenic Intergenic -81303 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr8-6731 chr8 87210919 87211129 + 7.54 0.000 intron (NM_173538, intron 5 of 10) MSTA-int|LTR|ERVL-MaLR 344609 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr11-8860 chr11 13446564 13446774 + 7.54 0.000 intron (NM_032320, intron 1 of 8) intron (NM_032320, intron 1 of 8) -6390 NM_001297742 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr16-1967 chr16 75279970 75280180 + 7.54 0.000 Intergenic AluSq2|SINE|Alu -12068 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr9-7875 chr9 87417850 87418060 + 7.54 0.000 Intergenic MIRb|SINE|MIR -79273 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr8-3946 chr8 46828098 46828308 + 7.54 0.000 Intergenic Intergenic -12683 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr1-15172 chr1 108570334 108570544 + 7.54 0.000 intron (NM_001010883, intron 1 of 10) L2|LINE|L2 10339 NM_001010883 284611 Hs.200230 NM_001010883 ENSG00000162636 FAM102B SYM-3B family with sequence similarity 102 member B protein-coding chr10-8253 chr10 75230574 75230784 + 7.54 0.000 intron (NM_001324090, intron 11 of 11) intron (NM_001324090, intron 11 of 11) 5278 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr4-5362 chr4 186139793 186140003 + 7.54 0.000 intron (NM_001367768, intron 1 of 13) intron (NM_001367768, intron 1 of 13) -4389 NM_001006655 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr5-4544 chr5 17817615 17817825 + 7.54 0.000 intron (NR_134286, intron 2 of 7) intron (NR_134286, intron 2 of 7) 10446 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr15-4960 chr15 78882167 78882377 + 7.54 0.000 intron (NM_006791, intron 3 of 11) AluJo|SINE|Alu 9283 NM_001265604 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chrX-2722 chrX 123735190 123735400 + 7.54 0.000 Intergenic Intergenic -2243 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr17-7026 chr17 58451717 58451927 + 7.54 0.000 intron (NM_001080439, intron 5 of 5) L1MA3|LINE|L1 -34240 NM_017763 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr8-2558 chr8 32846586 32846796 + 7.54 0.000 Intergenic Intergenic 124856 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr12-6455 chr12 93080906 93081116 + 7.54 0.000 intron (NR_040096, intron 3 of 4) MIR|SINE|MIR -93355 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr17-5406 chr17 33961543 33961753 + 7.54 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 195158 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr1-11968 chr1 80663143 80663353 + 7.54 0.000 Intergenic Intergenic 21961 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr6-5949 chr6 76782603 76782813 + 7.54 0.000 Intergenic ERVL-E-int|LTR|ERVL -189085 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr20-4166 chr20 44471288 44471498 + 7.54 0.000 Intergenic Intergenic -4481 NM_024331 79183 Hs.283869 NM_024331 ENSG00000124120 TTPAL C20orf121 alpha tocopherol transfer protein like protein-coding chr10-8955 chr10 118414972 118415182 + 7.54 0.000 Intergenic Intergenic 57969 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr14-3993 chr14 35924224 35924434 + 7.54 0.000 Intergenic LTR57-int|LTR|ERVL 97991 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr10-2917 chr10 246927 247137 + 7.54 0.000 intron (NM_001370117, intron 11 of 13) intron (NM_001370117, intron 11 of 13) 67038 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr3-8066 chr3 9124563 9124773 + 7.54 0.000 intron (NM_014850, intron 2 of 21) intron (NM_014850, intron 2 of 21) -67825 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr11-5380 chr11 65737759 65737969 + 7.54 0.000 Intergenic MER66-int|LTR|ERV1 -16926 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr12-7027 chr12 34153370 34153580 + 7.54 0.000 Intergenic MER89-int|LTR|ERV1 130979 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chrX-1062 chrX 128961373 128961583 + 7.54 0.000 Intergenic L2c|LINE|L2 562012 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr17-5781 chr17 62388622 62388832 + 7.54 0.000 intron (NM_001144933, intron 5 of 11) intron (NM_001144933, intron 5 of 11) 8174 NM_173503 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding chr5-5246 chr5 119291845 119292055 + 7.54 0.000 intron (NM_001077654, intron 1 of 1) HAL1|LINE|L1 23191 NM_001286815 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr9-8454 chr9 122681137 122681347 + 7.54 0.000 Intergenic MSTD|LTR|ERVL-MaLR 6112 NM_001005234 26735 Hs.626839 NM_001005234 ENSG00000171481 OR1L3 OR9-28|OR9-D olfactory receptor family 1 subfamily L member 3 protein-coding chr13-705 chr13 44682288 44682498 + 7.54 0.000 intron (NR_149082, intron 3 of 3) SVA_D|Retroposon|SVA 42024 NR_149082 106144541 Hs.578031 NR_149082 LINC00407 - long intergenic non-protein coding RNA 407 ncRNA chr8-4260 chr8 93106601 93106811 + 7.54 0.000 Intergenic Intergenic 60144 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr13-2228 chr13 24580499 24580709 + 7.54 0.000 non-coding (NR_002815, exon 1 of 9) non-coding (NR_002815, exon 1 of 9) 396 NR_002815 374491 Hs.406779 NR_002815 TPTE2P6 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6 pseudo chr6-7281 chr6 43355039 43355249 + 7.54 0.000 exon (NM_014345, exon 4 of 10) exon (NM_014345, exon 4 of 10) 14503 NM_014345 24149 Hs.509718 NM_014345 ENSG00000171467 ZNF318 HRIHFB2436|TZF|ZFP318 zinc finger protein 318 protein-coding chr14-4143 chr14 74411712 74411922 + 7.54 0.000 intron (NM_001105579, intron 1 of 3) intron (NM_001105579, intron 1 of 3) 14393 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr1-8481 chr1 118532246 118532456 + 7.54 0.000 Intergenic MIR1_Amn|SINE|MIR -347123 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr4-8689 chr4 181008302 181008512 + 7.54 0.000 Intergenic Intergenic 150742 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr11-4786 chr11 419970 420180 + 7.54 0.000 intron (NM_001347882, intron 18 of 21) intron (NM_001347882, intron 18 of 21) -2678 NM_001135053 59307 Hs.501624 NM_021805 ENSG00000185187 SIGIRR IL-1R8|TIR8 single Ig and TIR domain containing protein-coding chr2-12673 chr2 75055862 75056072 + 7.54 0.000 intron (NM_015727, intron 2 of 3) MER5B|DNA|hAT-Charlie -34845 NR_049796 100846995 NR_049796 ENSG00000263909 MIR5000 - microRNA 5000 ncRNA chr17-7280 chr17 3697358 3697568 + 7.54 0.000 Intergenic Intergenic -1059 NR_037928 100533970 Hs.731607 NR_037928 ENSG00000257950 P2RX5-TAX1BP3 P2RX5|P2X5 P2RX5-TAX1BP3 readthrough (NMD candidate) ncRNA chr13-4025 chr13 72446823 72447033 + 7.54 0.000 Intergenic Intergenic 280701 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr1-11537 chr1 166007645 166007855 + 7.54 0.000 Intergenic L1PREC2|LINE|L1 99829 NR_037431 100500832 NR_037431 ENSG00000283936 MIR3658 - microRNA 3658 ncRNA chr10-7980 chr10 59592970 59593180 + 7.54 0.000 Intergenic L1M2|LINE|L1 116816 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr2-7658 chr2 28556504 28556714 + 7.54 0.000 intron (NM_001170585, intron 17 of 56) intron (NM_001170585, intron 17 of 56) -9748 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr22-2537 chr22 25545885 25546095 + 7.54 0.000 Intergenic MLT2E|LTR|ERVL -18685 NM_001362778 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr2-13293 chr2 129218402 129218612 + 7.54 0.000 Intergenic L1MB4|LINE|L1 55384 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr18-2431 chr18 24373260 24373470 + 7.54 0.000 intron (NM_080597, intron 2 of 27) MER99|DNA|hAT? 24459 NM_080597 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr9-5749 chr9 126845248 126845458 + 7.54 0.000 Intergenic L2c|LINE|L2 -15286 NM_001099270 403341 Hs.177633 NM_203482 ENSG00000177125 ZBTB34 ZNF918 zinc finger and BTB domain containing 34 protein-coding chr14-3214 chr14 74199046 74199256 + 7.54 0.000 3' UTR (NM_001024674, exon 6 of 6) 3' UTR (NM_001024674, exon 6 of 6) -40298 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr6-7379 chr6 49562004 49562214 + 7.54 0.000 TTS (NR_146862) TTS (NR_146862) 11441 NR_146853 135398 Hs.722010 NM_153344 ENSG00000197261 C6orf141 - chromosome 6 open reading frame 141 protein-coding chr1-9812 chr1 59617782 59617992 + 7.54 0.000 intron (NM_001350794, intron 9 of 14) intron (NM_001350794, intron 9 of 14) 102257 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr7-9246 chr7 121910173 121910383 + 7.54 0.000 intron (NM_001369396, intron 2 of 30) L2a|LINE|L2 37117 NM_001369396 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding KI270587.1-2 KI270587.1 1806 2016 + 7.54 0.000 NA NA NA NA chr16-4886 chr16 88793417 88793627 + 7.54 0.000 Intergenic Intergenic -8302 NM_001142864 9780 Hs.377001 NM_001142864 ENSG00000103335 PIEZO1 DHS|FAM38A|LMPH3|LMPHM6|Mib piezo type mechanosensitive ion channel component 1 protein-coding chr1-11728 chr1 11468892 11469102 + 7.54 0.000 Intergenic L2c|LINE|L2 -10158 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr12-3422 chr12 109628231 109628441 + 7.54 0.000 Intergenic Intergenic 54542 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr12-8360 chr12 132073408 132073618 + 7.54 0.000 intron (NM_015409, intron 51 of 52) AluSg|SINE|Alu -10770 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400P1 EP400NL EP400 pseudogene 1 pseudo chr6-5560 chr6 475104 475314 + 7.54 0.000 Intergenic MER4C|LTR|ERV1 83457 NM_001195286 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr6-8201 chr6 134503736 134503946 + 7.54 0.000 non-coding (NR_038216, exon 3 of 3) non-coding (NR_038216, exon 3 of 3) -24944 NR_125852 101928231 Hs.634168 NR_125852 CT69 - cancer/testis associated transcript 69 ncRNA chr20-3846 chr20 24863496 24863706 + 7.54 0.000 Intergenic Intergenic -85668 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr6-8060 chr6 122111593 122111803 + 7.54 0.000 Intergenic Intergenic -287853 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr5-1761 chr5 10103464 10103674 + 7.54 0.000 Intergenic HAL1|LINE|L1 146319 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr4-3434 chr4 83075837 83076047 + 7.54 0.000 TTS (NM_001330727) TTS (NM_001330727) 33947 NM_001130716 51316 Hs.546392 NM_016619 ENSG00000145287 PLAC8 C15|DGIC|PNAS-144|onzin placenta associated 8 protein-coding chr12-2144 chr12 108857655 108857865 + 7.54 0.000 promoter-TSS (NM_001161330) promoter-TSS (NM_001161330) -177 NM_001161330 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr1-14213 chr1 34987133 34987343 + 7.54 0.000 exon (NM_007167, exon 16 of 16) exon (NM_007167, exon 16 of 16) -1891 NM_001195156 100506144 Hs.533986 NM_001195156 ENSG00000243749 TMEM35B ZMYM6NB transmembrane protein 35B protein-coding chr14-5114 chr14 89225535 89225745 + 7.54 0.000 intron (NM_001085471, intron 4 of 6) intron (NM_001085471, intron 4 of 6) 191593 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr10-4784 chr10 5883410 5883620 + 7.54 0.000 intron (NM_019046, intron 4 of 7) AluSx|SINE|Alu -6057 NM_001258452 84893 Hs.498543 NM_032807 ENSG00000134452 FBH1 FBXO18|Fbx18|hFBH1 F-box DNA helicase 1 protein-coding chr10-1994 chr10 47557648 47557858 + 7.54 0.000 Intergenic Intergenic -4230 NR_024495 642826 Hs.463017 NR_024495 BMS1P2 BMS1LP2|BMS1LP6|BMS1P6|bA144G6.1 BMS1 pseudogene 2 pseudo chr11-10379 chr11 112502058 112502268 + 7.54 0.000 intron (NR_120559, intron 2 of 2) MLT1A|LTR|ERVL-MaLR 17818 NR_120560 101928823 Hs.126118 NR_120559 ENSG00000254968 LINC02763 - long intergenic non-protein coding RNA 2763 ncRNA chr7-9219 chr7 117966623 117966833 + 7.54 0.000 Intergenic L1PA4|LINE|L1 -93287 NM_001363351 83992 Hs.592285 NM_033427 ENSG00000077063 CTTNBP2 C7orf8|CORTBP2|Orf4 cortactin binding protein 2 protein-coding chr21-1169 chr21 42338601 42338811 + 7.54 0.000 Intergenic Intergenic 12288 NM_005423 7032 Hs.2979 NM_005423 ENSG00000160181 TFF2 SML1|SP trefoil factor 2 protein-coding chr2-8606 chr2 140998096 140998306 + 7.54 0.000 intron (NM_018557, intron 15 of 90) intron (NM_018557, intron 15 of 90) -411516 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr1-12527 chr1 25111466 25111676 + 7.54 0.000 Intergenic Intergenic 88068 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr1-16148 chr1 205562779 205562989 + 7.54 0.000 intron (NR_152721, intron 1 of 3) AluSz|SINE|Alu -6130 NM_181644 148808 Hs.567714 NM_181644 ENSG00000174514 MFSD4A MFSD4|UNQ3064 major facilitator superfamily domain containing 4A protein-coding chr8-3833 chr8 30230761 30230971 + 7.54 0.000 Intergenic THE1D|LTR|ERVL-MaLR 74497 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr3-10289 chr3 125151172 125151382 + 7.54 0.000 TTS (NR_049815) TTS (NR_049815) 275 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr10-7736 chr10 32437334 32437544 + 7.54 0.000 intron (NR_120660, intron 2 of 2) LTR16B1|LTR|ERVL 8617 NR_120660 101929431 Hs.639819 NR_120660 LOC101929431 - uncharacterized LOC101929431 ncRNA chr13-3774 chr13 44033697 44033907 + 7.54 0.000 Intergenic Intergenic 11467 NR_026955 121838 Hs.201441 NR_026955 LINC00284 NCRNA00284 long intergenic non-protein coding RNA 284 ncRNA chr4-4973 chr4 131997519 131997729 + 7.54 0.000 Intergenic Intergenic 232786 NR_125884 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr4-4593 chr4 76341077 76341287 + 7.54 0.000 intron (NM_001042784, intron 17 of 23) intron (NM_001042784, intron 17 of 23) 35156 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding chr11-6614 chr11 73774545 73774755 + 7.54 0.000 Intergenic SVA_C|Retroposon|SVA -13224 NM_001318500 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr16-3716 chr16 3434316 3434526 + 7.54 0.000 3' UTR (NM_152457, exon 4 of 4) 3' UTR (NM_152457, exon 4 of 4) 9083 NM_152457 146434 Hs.88630 NM_152457 ENSG00000167981 ZNF597 HIT-4 zinc finger protein 597 protein-coding chrX-3557 chrX 68523022 68523232 + 7.54 0.000 intron (NM_001195214, intron 5 of 5) intron (NM_001195214, intron 5 of 5) 24076 NM_173834 286451 Hs.82719 NM_173834 ENSG00000181704 YIPF6 FinGER6 Yip1 domain family member 6 protein-coding chr11-7173 chr11 129749464 129749674 + 7.54 0.000 Intergenic Intergenic -66212 NM_001331211 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr6-8059 chr6 121770881 121771091 + 7.54 0.000 Intergenic Intergenic 335340 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr14-3291 chr14 84002005 84002215 + 7.54 0.000 Intergenic Intergenic -1269822 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr3-7913 chr3 139966360 139966570 + 7.54 0.000 intron (NM_022131, intron 1 of 16) L2c|LINE|L2 31280 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr9-8762 chr9 133543223 133543433 + 7.54 0.000 intron (NM_001145320, intron 7 of 18) LTR38B|LTR|ERV1 8624 NM_014694 9719 Hs.522543 NM_014694 ENSG00000197859 ADAMTSL2 ADAMTSL-2|GPHYSD1 ADAMTS like 2 protein-coding chr5-6234 chr5 84484269 84484479 + 7.54 0.000 Intergenic L1ME4b|LINE|L1 -99494 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr11-7109 chr11 123253988 123254198 + 7.54 0.000 Intergenic Intergenic -58845 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chrX-3291 chrX 105051971 105052181 + 7.54 0.000 intron (NM_017416, intron 2 of 10) MLT1J|LTR|ERVL-MaLR 168617 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr17-7757 chr17 34818323 34818533 + 7.54 0.000 Intergenic L2a|LINE|L2 143032 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr13-4444 chr13 111950984 111951194 + 7.54 0.000 Intergenic Intergenic -21221 NR_120392 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr2-14674 chr2 236909619 236909829 + 7.54 0.000 Intergenic Intergenic 146443 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr19-6568 chr19 19481593 19481803 + 7.54 0.000 intron (NM_001359631, intron 2 of 10) intron (NM_001359631, intron 2 of 10) 33850 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr17-5786 chr17 62833336 62833546 + 7.54 0.000 intron (NR_135634, intron 1 of 1) L1MC3|LINE|L1 24939 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 MARCH10-DT - MARCH10 divergent transcript ncRNA chr17-5465 chr17 40204572 40204782 + 7.54 0.000 Intergenic Intergenic 11080 NR_106927 102465523 NR_106927 ENSG00000274621 MIR6867 hsa-mir-6867 microRNA 6867 ncRNA chr16-1446 chr16 71625275 71625485 + 7.54 0.000 promoter-TSS (NM_001271329) promoter-TSS (NM_001271329) -804 NM_052858 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chr10-5324 chr10 71166342 71166552 + 7.54 0.000 Intergenic Intergenic -46123 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr1-9573 chr1 42936829 42937039 + 7.54 0.000 intron (NM_006516, intron 2 of 9) MER20|DNA|hAT-Charlie 21934 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr5-3176 chr5 74127792 74128002 + 7.54 0.000 Intergenic Intergenic 180428 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr4-7566 chr4 78766165 78766375 + 7.54 0.000 Intergenic L2c|LINE|L2 -10080 NM_017593 55589 Hs.146551 NM_017593 ENSG00000138756 BMP2K BIKE|HRIHFB2017 BMP2 inducible kinase protein-coding chr15-3382 chr15 87015332 87015542 + 7.54 0.000 intron (NM_152336, intron 24 of 24) MLT2B3|LTR|ERVL -27011 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA chr3-7431 chr3 120244296 120244506 + 7.54 0.000 promoter-TSS (NM_153002) promoter-TSS (NM_153002) -106 NM_001168271 165829 Hs.333358 NM_153002 ENSG00000175697 GPR156 GABABL|PGR28 G protein-coupled receptor 156 protein-coding chr3-9197 chr3 36404892 36405102 + 7.54 0.000 intron (NM_001292049, intron 1 of 8) MADE1|DNA|TcMar-Mariner 24510 NM_003149 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chrX-4382 chrX 50730146 50730356 + 7.54 0.000 intron (NR_027121, intron 1 of 9) AluSp|SINE|Alu 83793 NM_020717 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding chr17-3629 chr17 2490829 2491039 + 7.54 0.000 intron (NM_024086, intron 2 of 9) intron (NM_024086, intron 2 of 9) 20954 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr20-2336 chr20 11316574 11316784 + 7.54 0.000 Intergenic L2a|LINE|L2 -43296 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chrX-4639 chrX 78650050 78650260 + 7.54 0.000 Intergenic Intergenic 9173 NM_152694 203430 Hs.134873 NM_152694 ENSG00000179300 RTL3 Mar3|Mart3|SIRH9|ZCCHC5|ZHC5 retrotransposon Gag like 3 protein-coding chrX-4130 chrX 27183253 27183463 + 7.54 0.000 Intergenic L1M1|LINE|L1 279983 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr5-1740 chr5 172040294 172040504 + 7.54 0.000 Intergenic Intergenic -33526 NM_012300 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr2-9138 chr2 209728725 209728935 + 7.54 0.000 intron (NM_001039538, intron 13 of 14) intron (NM_001039538, intron 13 of 14) -43002 NM_182587 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr1-9718 chr1 53149603 53149813 + 7.54 0.000 Intergenic Intergenic -7070 NM_001287596 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr4-3814 chr4 115604647 115604857 + 7.54 0.000 Intergenic Intergenic -491132 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr15-2025 chr15 49242863 49243073 + 7.54 0.000 intron (NM_001289030, intron 6 of 10) L1M7|LINE|L1 72721 NM_002044 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr1-12201 chr1 202380703 202380913 + 7.54 0.000 intron (NM_002481, intron 1 of 23) intron (NM_002481, intron 1 of 23) 32106 NM_001167857 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chrX-2941 chrX 153804037 153804247 + 7.54 0.000 exon (NM_001303512, exon 8 of 8) exon (NM_001303512, exon 8 of 8) 9474 NM_006280 6748 Hs.409223 NM_006280 ENSG00000180879 SSR4 CDG1Y|TRAPD signal sequence receptor subunit 4 protein-coding chr10-5102 chr10 48317636 48317846 + 7.54 0.000 intron (NM_001323327, intron 2 of 12) L2|LINE|L2 11064 NM_001323331 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr5-4889 chr5 67077071 67077281 + 7.54 0.000 intron (NM_001297651, intron 2 of 25) intron (NM_001297651, intron 2 of 25) 72521 NM_001290227 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr13-4262 chr13 97543215 97543425 + 7.54 0.000 Intergenic Intergenic 109151 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr8-3589 chr8 137293336 137293546 + 7.54 0.000 Intergenic L2|LINE|L2 120147 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr18-3258 chr18 50023772 50023982 + 7.54 0.000 intron (NM_001080467, intron 4 of 39) intron (NM_001080467, intron 4 of 39) 102686 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr5-2897 chr5 119581246 119581456 + 7.54 0.000 Intergenic Intergenic -48207 NM_001367956 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr10-4902 chr10 21298063 21298273 + 7.54 0.000 Intergenic MIRb|SINE|MIR 74782 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr7-3344 chr7 78232823 78233033 + 7.54 0.000 intron (NM_001301128, intron 10 of 20) L2a|LINE|L2 -114314 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr14-3609 chr14 52215717 52215927 + 7.54 0.000 Intergenic Intergenic -51876 NM_000953 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr6-8583 chr6 165697513 165697723 + 7.54 0.000 Intergenic L1MB3|LINE|L1 -35338 NM_006661 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr12-8104 chr12 119193214 119193424 + 7.54 0.000 intron (NM_014365, intron 2 of 2) intron (NM_014365, intron 2 of 2) 14529 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr7-8897 chr7 92833038 92833248 + 7.54 0.000 exon (NM_001145306, exon 2 of 8) exon (NM_001145306, exon 2 of 8) 816 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr2-8457 chr2 121790410 121790620 + 7.54 0.000 Intergenic Intergenic 34864 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr10-8926 chr10 115827600 115827810 + 7.54 0.000 intron (NM_207303, intron 27 of 28) intron (NM_207303, intron 27 of 28) 367084 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr1-15572 chr1 159868665 159868875 + 7.54 0.000 Intergenic Intergenic -6113 NM_001013661 391123 Hs.647718 NM_001013661 ENSG00000243284 VSIG8 - V-set and immunoglobulin domain containing 8 protein-coding chr7-5781 chr7 77684212 77684422 + 7.54 0.000 intron (NR_038361, intron 2 of 2) L2c|LINE|L2 11948 NR_134251 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr7-6164 chr7 128035802 128036012 + 7.54 0.000 intron (NM_014390, intron 16 of 23) intron (NM_014390, intron 16 of 23) -4470 NM_022143 64101 Hs.655003 NM_022143 ENSG00000128594 LRRC4 NAG14|NGL-2 leucine rich repeat containing 4 protein-coding chr4-5070 chr4 145351366 145351576 + 7.54 0.000 Intergenic L1MB3|LINE|L1 -11052 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr4-7464 chr4 70340088 70340298 + 7.54 0.000 Intergenic Intergenic 5212 NM_033122 85438 Hs.120316 NM_033122 ENSG00000145309 CABS1 C4orf35|CLPH|NYD-SP26 calcium binding protein, spermatid associated 1 protein-coding chr3-5999 chr3 48535558 48535768 + 7.54 0.000 intron (NM_001317135, intron 8 of 13) intron (NM_001317135, intron 8 of 13) 14358 NR_106881 102465494 NR_106881 ENSG00000278799 MIR6823 hsa-mir-6823 microRNA 6823 ncRNA chr13-4219 chr13 94292067 94292277 + 7.54 0.000 intron (NM_005708, intron 5 of 8) MIRb|SINE|MIR -104181 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr3-6926 chr3 158312702 158312912 + 7.54 0.000 intron (NM_001271838, intron 5 of 9) L2|LINE|L2 202718 NM_001271838 51319 Hs.591283 NM_016625 ENSG00000174891 RSRC1 BM-011|MRT70|SFRS21|SRrp53 arginine and serine rich coiled-coil 1 protein-coding chr2-7836 chr2 46909658 46909868 + 7.54 0.000 intron (NM_001171508, intron 1 of 3) intron (NM_001171508, intron 1 of 3) 6043 NM_001171509 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr1-15220 chr1 110899647 110899857 + 7.54 0.000 3' UTR (NM_001320638, exon 6 of 6) 3' UTR (NM_001320638, exon 6 of 6) 26604 NM_000560 963 Hs.443057 NM_000560 ENSG00000143119 CD53 MOX44|TSPAN25 CD53 molecule protein-coding chr20-892 chr20 36093555 36093765 + 7.54 0.000 intron (NM_001258329, intron 1 of 22) intron (NM_001258329, intron 1 of 22) 950 NM_001258329 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr11-5133 chr11 272537 272747 + 7.54 0.000 Intergenic Intergenic -5765 NM_001276700 171389 Hs.352611 NM_138329 ENSG00000174885 NLRP6 AVR|CLR11.4|NALP6|NAVR|NAVR/AVR|PAN3|PYPAF5 NLR family pyrin domain containing 6 protein-coding chr14-4862 chr14 70358761 70358971 + 7.54 0.000 intron (NM_001202548, intron 3 of 5) intron (NM_001202548, intron 3 of 5) 817 NM_001204090 51241 Hs.709581 NM_016468 ENSG00000133983 COX16 C14orf112|HSPC203|hCOX16 cytochrome c oxidase assembly factor COX16 protein-coding chr1-16357 chr1 220022198 220022408 + 7.54 0.000 intron (NM_004446, intron 9 of 31) intron (NM_004446, intron 9 of 31) 24202 NM_004446 2058 Hs.497788 NM_004446 ENSG00000136628 EPRS EARS|GLUPRORS|HLD15|PARS|PIG32|QARS|QPRS glutamyl-prolyl-tRNA synthetase protein-coding chr3-9670 chr3 62539749 62539959 + 7.54 0.000 intron (NM_003716, intron 11 of 29) MIR|SINE|MIR -166304 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr3-9135 chr3 31568410 31568620 + 7.54 0.000 intron (NM_178862, intron 1 of 15) L1MA3|LINE|L1 35590 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr12-2978 chr12 112813704 112813914 + 7.54 0.000 intron (NM_001347955, intron 2 of 20) MIRb|SINE|MIR 22061 NR_145127 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr1-8893 chr1 5913442 5913652 + 7.54 0.000 intron (NR_111987, intron 11 of 32) intron (NR_111987, intron 11 of 32) -50806 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr12-7679 chr12 87896149 87896359 + 7.54 0.000 Intergenic THE1B|LTR|ERVL-MaLR -111543 NR_033410 400058 Hs.572212 NR_033410 MKRN9P MKRN5|MKRN9|MKRNP6|RNF65|ZNF127L3 makorin ring finger protein 9, pseudogene pseudo chr5-5082 chr5 96316629 96316839 + 7.54 0.000 intron (NR_130776, intron 2 of 4) intron (NR_130776, intron 2 of 4) 115425 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr9-7470 chr9 28277442 28277652 + 7.54 0.000 intron (NM_152570, intron 5 of 6) AluSq|SINE|Alu 441758 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr17-5783 chr17 62457855 62458065 + 7.54 0.000 Intergenic Intergenic -21158 NM_001330418 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr9-4520 chr9 71421639 71421849 + 7.54 0.000 intron (NM_001366143, intron 1 of 25) Tigger3a|DNA|TcMar-Tigger 25227 NM_001366143 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr13-1584 chr13 38865542 38865752 + 7.54 0.000 intron (NM_207361, intron 16 of 23) intron (NM_207361, intron 16 of 23) -38056 NR_146963 100874073 Hs.253994 NR_146963 FREM2-AS1 - FREM2 antisense RNA 1 ncRNA chr10-5303 chr10 70177749 70177959 + 7.54 0.000 Intergenic Intergenic -7340 NM_001142648 56681 Hs.499960 NM_020150 ENSG00000079332 SAR1A SAR1|SARA1|Sara|masra2 secretion associated Ras related GTPase 1A protein-coding chr4-7406 chr4 64410985 64411195 + 7.54 0.000 Intergenic Intergenic -1630 NM_001363796 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr12-5174 chr12 103846688 103846898 + 7.54 0.000 intron (NR_027249, intron 14 of 15) intron (NR_027249, intron 14 of 15) -5559 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr15-3663 chr15 100276453 100276663 + 7.54 0.000 intron (NM_139057, intron 4 of 21) intron (NM_139057, intron 4 of 21) 65417 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 WMS4 ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding chr8-1956 chr8 58411167 58411377 + 7.54 0.000 promoter-TSS (NM_001330535) promoter-TSS (NM_001330535) 8 NM_001330535 137886 Hs.155572 NM_001077619 ENSG00000215114 UBXN2B p37 UBX domain protein 2B protein-coding chr14-3144 chr14 68807245 68807455 + 7.54 0.000 Intergenic Intergenic -11107 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr1-6195 chr1 205325316 205325526 + 7.54 0.000 Intergenic L2c|LINE|L2 -3676 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr20-3085 chr20 18081644 18081854 + 7.54 0.000 Intergenic L2c|LINE|L2 -22561 NM_001303462 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr8-6958 chr8 106127478 106127688 + 7.54 0.000 Intergenic MamRep38|DNA|hAT -67080 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr1-15538 chr1 157414641 157414851 + 7.54 0.000 Intergenic Intergenic 137769 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr13-1351 chr13 50075827 50076037 + 7.54 0.000 intron (NR_152566, intron 1 of 13) intron (NR_152566, intron 1 of 13) 6109 NR_152571 8847 Hs.547964 NR_002612 ENSG00000231607 DLEU2 ALT1|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 ncRNA chr11-7192 chr11 131426383 131426593 + 7.54 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 55873 NM_001352006 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr10-1862 chr10 83012971 83013181 + 7.54 0.000 Intergenic Intergenic 664013 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr3-7563 chr3 196912539 196912749 + 7.54 0.000 intron (NM_001308045, intron 6 of 8) L1PA8|LINE|L1 -27233 NR_046630 100874001 Hs.591671 NR_046630 NCBP2-AS1 - NCBP2 antisense RNA 1 ncRNA chr13-3656 chr13 32497387 32497597 + 7.54 0.000 non-coding (NR_051980, exon 1 of 1) non-coding (NR_051980, exon 1 of 1) 1000 NR_051980 100462953 Hs.687692 NR_051980 MICOS10P1 CG012|MINOS1P1|N4BP2L2-IT|N4BP2L2-IT1|N4BP2L2IT1 MICOS10 pseudogene 1 pseudo chr20-2363 chr20 16387166 16387376 + 7.54 0.000 intron (NM_001199866, intron 17 of 22) intron (NM_001199866, intron 17 of 22) 186177 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr3-9138 chr3 31762104 31762314 + 7.54 0.000 intron (NM_001174060, intron 3 of 10) intron (NM_001174060, intron 3 of 10) 57996 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA chr19-3859 chr19 18799384 18799594 + 7.54 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat -8184 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr11-5714 chr11 1803191 1803401 + 7.54 0.000 Intergenic Intergenic -31131 NM_001290332 90019 Hs.161031 NM_138567 ENSG00000149043 SYT8 - synaptotagmin 8 protein-coding chr18-1049 chr18 10856153 10856363 + 7.54 0.000 intron (NM_022068, intron 6 of 51) intron (NM_022068, intron 6 of 51) -96609 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr19-2693 chr19 18169281 18169491 + 7.54 0.000 non-coding (NR_073517, exon 16 of 16) non-coding (NR_073517, exon 16 of 16) -4427 NM_006332 10437 Hs.14623 NM_006332 ENSG00000216490 IFI30 GILT|IFI-30|IP-30|IP30 IFI30 lysosomal thiol reductase protein-coding chr15-3015 chr15 56524956 56525166 + 7.54 0.000 Intergenic Intergenic -59924 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr4-4400 chr4 42586329 42586539 + 7.54 0.000 exon (NM_006095, exon 9 of 37) exon (NM_006095, exon 9 of 37) 70671 NM_006095 10396 Hs.435052 NM_006095 ENSG00000124406 ATP8A1 ATPASEII|ATPIA|ATPP2 ATPase phospholipid transporting 8A1 protein-coding chr1-9113 chr1 17679516 17679726 + 7.54 0.000 intron (NR_137287, intron 27 of 29) MIRb|SINE|MIR 61308 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chrX-3530 chrX 53456305 53456515 + 7.54 0.000 Intergenic Intergenic -22034 NM_004493 3028 Hs.171280 NM_004493 ENSG00000072506 HSD17B10 17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|HSD10MD|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1 hydroxysteroid 17-beta dehydrogenase 10 protein-coding chr10-3563 chr10 79195256 79195466 + 7.54 0.000 intron (NM_020338, intron 4 of 24) intron (NM_020338, intron 4 of 24) 126395 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr2-14077 chr2 198720537 198720747 + 7.54 0.000 Intergenic Intergenic -345545 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr6-4281 chr6 12815447 12815657 + 7.54 0.000 intron (NM_001322308, intron 3 of 13) intron (NM_001322308, intron 3 of 13) 96853 NM_001322310 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr18-993 chr18 24935553 24935763 + 7.54 0.000 intron (NR_146903, intron 1 of 1) intron (NR_146903, intron 1 of 1) 52321 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr12-7372 chr12 56809091 56809301 + 7.54 0.000 Intergenic MER52A|LTR|ERV1 45872 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr19-6507 chr19 18236445 18236655 + 7.54 0.000 intron (NM_000923, intron 1 of 15) L2b|LINE|L2 -2171 NM_001330172 5143 Hs.132584 NM_000923 ENSG00000105650 PDE4C DPDE1|PDE21 phosphodiesterase 4C protein-coding chr9-7740 chr9 74760379 74760589 + 7.54 0.000 intron (NM_017662, intron 27 of 38) Tigger3c|DNA|TcMar-Tigger 126863 NM_001177311 140803 Hs.272225 NM_017662 ENSG00000119121 TRPM6 CHAK2|HMGX|HOMG|HOMG1|HSH transient receptor potential cation channel subfamily M member 6 protein-coding chr2-4402 chr2 83103587 83103797 + 7.54 0.000 Intergenic Intergenic 246889 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr2-7943 chr2 61439296 61439506 + 7.54 0.000 intron (NM_014709, intron 1 of 79) intron (NM_014709, intron 1 of 79) -22024 NR_003707 100124537 Hs.675825 NR_003707 ENSG00000206937 SNORA70B - small nucleolar RNA, H/ACA box 70B snoRNA chr12-2716 chr12 128382939 128383149 + 7.54 0.000 intron (NM_001136103, intron 1 of 8) intron (NM_001136103, intron 1 of 8) 88952 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr2-6016 chr2 96691882 96692092 + 7.54 0.000 intron (NM_001293083, intron 30 of 52) intron (NM_001293083, intron 30 of 52) 48089 NM_030805 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr5-5826 chr5 177611556 177611766 + 7.54 0.000 Intergenic Intergenic 11529 NM_007255 11285 Hs.455109 NM_007255 ENSG00000027847 B4GALT7 EDSP1|EDSSLA|EDSSPD1|XGALT1|XGPT|XGPT1 beta-1,4-galactosyltransferase 7 protein-coding chr3-9597 chr3 56410491 56410701 + 7.54 0.000 intron (NR_132749, intron 2 of 17) intron (NR_132749, intron 2 of 17) 57871 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr9-7754 chr9 75940570 75940780 + 7.54 0.000 intron (NR_120409, intron 2 of 19) intron (NR_120409, intron 2 of 19) 50002 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr1-15070 chr1 95854174 95854384 + 7.54 0.000 Intergenic MER52D|LTR|ERV1 -137789 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr2-12496 chr2 62932697 62932907 + 7.54 0.000 intron (NM_001142615, intron 10 of 22) AluSz|SINE|Alu 114909 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr1-14829 chr1 75486123 75486333 + 7.54 0.000 intron (NM_001320285, intron 2 of 25) intron (NM_001320285, intron 2 of 25) 124886 NM_001320287 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr10-7015 chr10 75935342 75935552 + 7.54 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 152686 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr14-2701 chr14 85180632 85180842 + 7.54 0.000 Intergenic MER50|LTR|ERV1 -91195 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr11-7938 chr11 2715556 2715766 + 7.54 0.000 intron (NM_181798, intron 11 of 15) intron (NM_181798, intron 11 of 15) -15663 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr3-10008 chr3 100698055 100698265 + 7.54 0.000 Intergenic Intergenic -11130 NM_001007565 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr21-730 chr21 37208387 37208597 + 7.54 0.000 promoter-TSS (NR_026719) promoter-TSS (NR_026719) -11 NR_026719 257203 Hs.505159 NM_148675 ENSG00000230366 DSCR9 NCRNA00038 Down syndrome critical region 9 ncRNA chr4-7663 chr4 86536841 86537051 + 7.54 0.000 Intergenic Intergenic 5606 NR_039657 100616463 NR_039657 ENSG00000266515 MIR4452 - microRNA 4452 ncRNA chrX-3461 chrX 27339015 27339225 + 7.54 0.000 Intergenic Intergenic 124221 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr4-3839 chr4 124111915 124112125 + 7.54 0.000 Intergenic Intergenic 337756 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr3-6925 chr3 158045245 158045455 + 7.54 0.000 Intergenic L1MA9|LINE|L1 60813 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr17-5450 chr17 39615678 39615888 + 7.54 0.000 Intergenic Intergenic -7863 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr5-8515 chr5 133911108 133911318 + 7.54 0.000 Intergenic MER68C|LTR|ERVL -2464 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr2-8852 chr2 174106657 174106867 + 7.54 0.000 intron (NM_001011708, intron 6 of 9) intron (NM_001011708, intron 6 of 9) 81482 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr17-7633 chr17 28505587 28505797 + 7.54 0.000 promoter-TSS (NM_001369369) promoter-TSS (NM_001369369) -656 NM_001369369 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chr12-3830 chr12 82774528 82774738 + 7.54 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 87478 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr5-2995 chr5 1298253 1298463 + 7.54 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -3290 NR_149163 7015 Hs.492203 NM_198253 ENSG00000164362 TERT CMM9|DKCA2|DKCB4|EST2|PFBMFT1|TCS1|TP2|TRT|hEST2|hTRT telomerase reverse transcriptase protein-coding chr18-2178 chr18 59540734 59540944 + 7.54 0.000 intron (NM_133459, intron 2 of 10) MER58A|DNA|hAT-Charlie 156584 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr7-9057 chr7 103777579 103777789 + 7.54 0.000 intron (NM_005045, intron 3 of 64) intron (NM_005045, intron 3 of 64) 211832 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr9-6112 chr9 2235106 2235316 + 7.54 0.000 Intergenic Intergenic 76755 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr4-6897 chr4 14124962 14125172 + 7.54 0.000 intron (NR_033931, intron 1 of 2) intron (NR_033931, intron 1 of 2) 13099 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr11-5300 chr11 45529562 45529772 + 7.54 0.000 Intergenic MIR|SINE|MIR 135955 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr3-5244 chr3 102180212 102180422 + 7.54 0.000 Intergenic Intergenic 16612 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr15-3625 chr15 77541684 77541894 + 7.54 0.000 Intergenic Intergenic 16194 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr18-3387 chr18 59684714 59684924 + 7.54 0.000 intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) 12604 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chrX-4827 chrX 102345851 102346061 + 7.54 0.000 Intergenic Intergenic 94052 NM_001099686 728343 Hs.530358 NM_001099686 ENSG00000269437 NXF2B TCP11X2|bA353J17.1 nuclear RNA export factor 2B protein-coding chr13-3348 chr13 73659799 73660009 + 7.54 0.000 Intergenic Intergenic 95660 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr7-4144 chr7 76397309 76397519 + 7.54 0.000 promoter-TSS (NM_007155) promoter-TSS (NM_007155) -108 NM_007155 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr7-7134 chr7 2410459 2410669 + 7.54 0.000 intron (NM_018641, intron 1 of 1) L2a|LINE|L2 6953 NM_001243795 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr1-13563 chr1 7637550 7637760 + 7.54 0.000 intron (NM_001349608, intron 5 of 21) MIRc|SINE|MIR -32075 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr7-4784 chr7 80312232 80312442 + 7.54 0.000 Intergenic Intergenic 62102 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chr4-3258 chr4 92331484 92331694 + 7.54 0.000 intron (NM_001286838, intron 1 of 14) intron (NM_001286838, intron 1 of 14) 27190 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr1-7691 chr1 22003599 22003809 + 7.54 0.000 intron (NM_005747, intron 2 of 7) intron (NM_005747, intron 2 of 7) 2047 NM_005747 10136 Hs.181289 NM_005747 ENSG00000142789 CELA3A ELA3|ELA3A chymotrypsin like elastase 3A protein-coding chr2-12110 chr2 34458922 34459132 + 7.54 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -218530 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr4-4070 chr4 3507264 3507474 + 7.54 0.000 non-coding (NR_110005, exon 8 of 8) non-coding (NR_110005, exon 8 of 8) 22825 NM_001256896 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr6-8332 chr6 146878516 146878726 + 7.54 0.000 intron (NR_034115, intron 7 of 10) intron (NR_034115, intron 7 of 10) -74797 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr3-3769 chr3 11126917 11127127 + 7.54 0.000 Intergenic L2a|LINE|L2 -10216 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr9-4562 chr9 88141618 88141828 + 7.54 0.000 Intergenic Intergenic -3242 NM_001350978 645961 Hs.632070 NM_001166137 SPATA31C2 FAM75C2 SPATA31 subfamily C member 2 protein-coding chr6-3880 chr6 54286102 54286312 + 7.54 0.000 Intergenic Intergenic -22234 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr13-3346 chr13 73527479 73527689 + 7.54 0.000 Intergenic Intergenic -36660 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chrX-2001 chrX 13922107 13922317 + 7.54 0.000 intron (NM_001318729, intron 1 of 6) MER20|DNA|hAT-Charlie 16426 NM_001001994 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr10-6130 chr10 133134882 133135092 + 7.54 0.000 Intergenic Intergenic -25232 NM_001347865 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr5-3209 chr5 82307672 82307882 + 7.54 0.000 intron (NM_001017971, intron 7 of 9) intron (NM_001017971, intron 7 of 9) 28315 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr5-7301 chr5 14594516 14594726 + 7.54 0.000 intron (NM_019018, intron 1 of 7) intron (NM_019018, intron 1 of 7) 12829 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 OTULINL FAM105A|NET20 OTU deubiquitinase with linear linkage specificity like protein-coding chr11-6862 chr11 100941189 100941399 + 7.54 0.000 intron (NM_001367945, intron 10 of 25) L2a|LINE|L2 7020 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr11-3646 chr11 88860346 88860556 + 7.54 0.000 intron (NM_001143831, intron 1 of 8) intron (NM_001143831, intron 1 of 8) 187621 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr13-3055 chr13 32721178 32721388 + 7.54 0.000 intron (NM_015032, intron 19 of 34) SVA_B|Retroposon|SVA 134831 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr5-4965 chr5 78624133 78624343 + 7.54 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 24534 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr10-6949 chr10 63985978 63986188 + 7.54 0.000 Intergenic MER50|LTR|ERV1 -464193 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr10-5767 chr10 103827882 103828092 + 7.54 0.000 intron (NM_014631, intron 1 of 13) MIR|SINE|MIR 27419 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-6317 chr2 69963301 69963511 + 7.54 0.000 non-coding (NR_033872, exon 11 of 11) non-coding (NR_033872, exon 11 of 11) -1141 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase retroviral like 1 protein-coding chrX-4750 chrX 94300079 94300289 + 7.54 0.000 Intergenic L1PB1|LINE|L1 625978 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr10-7121 chr10 99115812 99116022 + 7.54 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) 119958 NM_001166246 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding chr12-5017 chr12 83155804 83156014 + 7.54 0.000 Intergenic L1PA11|LINE|L1 468754 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr12-1309 chr12 8697948 8698158 + 7.54 0.000 promoter-TSS (NR_147946) promoter-TSS (NR_147946) 62 NR_147949 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr5-7310 chr5 15215106 15215316 + 7.54 0.000 intron (NR_109944, intron 2 of 2) intron (NR_109944, intron 2 of 2) 51349 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr7-4034 chr7 157320790 157321000 + 7.54 0.000 Intergenic L1M5|LINE|L1 -16109 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr7-5712 chr7 70361809 70362019 + 7.54 0.000 intron (NM_015570, intron 4 of 18) (CACATA)n|Simple_repeat|Simple_repeat 763439 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr17-5301 chr17 22411006 22411216 + 7.54 0.000 non-coding (NR_027084, exon 2 of 2) non-coding (NR_027084, exon 2 of 2) 5092 NR_027084 284124 Hs.310247 NR_027084 ENSG00000276399 FLJ36000 - uncharacterized FLJ36000 ncRNA chr22-1956 chr22 49748580 49748790 + 7.54 0.000 Intergenic Intergenic 75646 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr6-6004 chr6 105252617 105252827 + 7.54 0.000 Intergenic L1MB4|LINE|L1 -72708 NM_022361 64208 Hs.458336 NM_022361 ENSG00000132429 POPDC3 POP3|bA355M14.1 popeye domain containing 3 protein-coding chr15-4982 chr15 79943853 79944063 + 7.54 0.000 Intergenic L1MC4a|LINE|L1 -20204 NR_037653 400410 Hs.729127 NM_001100879 ENSG00000180953 ST20 HCCS-1 suppressor of tumorigenicity 20 protein-coding chr14-3341 chr14 89845645 89845855 + 7.54 0.000 intron (NM_001284269, intron 5 of 5) intron (NM_001284269, intron 5 of 5) 108786 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr1-10305 chr1 150962381 150962591 + 7.54 0.000 intron (NM_001366417, intron 17 of 21) intron (NM_001366417, intron 17 of 21) 12349 NM_022075 29956 Hs.744017 NM_013384 ENSG00000143418 CERS2 L3|LASS2|SP260|TMSG1 ceramide synthase 2 protein-coding chr11-3668 chr11 123358471 123358681 + 7.54 0.000 promoter-TSS (NM_001367421) promoter-TSS (NM_001367421) 40 NM_001367421 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr13-2405 chr13 42981220 42981430 + 7.54 0.000 intron (NM_033255, intron 1 of 10) intron (NM_033255, intron 1 of 10) 10916 NM_001331228 94240 Hs.546467 NM_033255 ENSG00000133106 EPSTI1 BRESI1 epithelial stromal interaction 1 protein-coding chr19-2962 chr19 12875525 12875735 + 7.54 0.000 TTS (NM_014975) TTS (NM_014975) 5819 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr12-5919 chr12 66497396 66497606 + 7.54 0.000 intron (NM_001366722, intron 7 of 24) L2c|LINE|L2 181575 NM_001366722 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr12-7722 chr12 91605889 91606099 + 7.54 0.000 Intergenic Intergenic -423177 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr19-6329 chr19 10518406 10518616 + 7.54 0.000 promoter-TSS (NM_001166215) promoter-TSS (NM_001166215) -546 NM_001166215 53637 Hs.501561 NM_030760 ENSG00000180739 S1PR5 EDG8|Edg-8|S1P5|SPPR-1|SPPR-2 sphingosine-1-phosphate receptor 5 protein-coding chr5-8582 chr5 137743194 137743404 + 7.54 0.000 Intergenic Intergenic -7210 NM_017415 26249 Hs.655084 NM_017415 ENSG00000146021 KLHL3 PHA2D kelch like family member 3 protein-coding chr20-2542 chr20 35922885 35923095 + 7.54 0.000 intron (NM_016436, intron 13 of 17) AluJb|SINE|Alu 31636 NM_033630 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding chr2-4504 chr2 22351755 22351965 + 7.54 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -184619 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr2-14484 chr2 225726052 225726262 + 7.54 0.000 Intergenic Intergenic 325271 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr6-6485 chr6 113936230 113936440 + 7.54 0.000 non-coding (NR_073443, exon 14 of 14) non-coding (NR_073443, exon 14 of 14) 31948 NR_027060 285759 Hs.376634 NM_173673 ENSG00000175967 FLJ34503 - uncharacterized FLJ34503 ncRNA chr2-11244 chr2 170436036 170436246 + 7.54 0.000 intron (NM_001083615, intron 22 of 33) intron (NM_001083615, intron 22 of 33) -85198 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr11-6297 chr11 61546727 61546937 + 7.54 0.000 intron (NM_001252065, intron 3 of 9) intron (NM_001252065, intron 3 of 9) -3956 NM_001370210 9066 Hs.131188 NM_004200 ENSG00000011347 SYT7 IPCA-7|IPCA7|PCANAP7|SYT-VII|SYTVII synaptotagmin 7 protein-coding chr3-7308 chr3 19030106 19030316 + 7.54 0.000 Intergenic L1MA3|LINE|L1 -118299 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr13-4024 chr13 72393683 72393893 + 7.54 0.000 Intergenic (TGTGTA)n|Simple_repeat|Simple_repeat 333841 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr3-6445 chr3 104907569 104907779 + 7.54 0.000 Intergenic MER117|DNA|hAT-Charlie -459039 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr8-3932 chr8 42565872 42566082 + 7.54 0.000 Intergenic HERV9-int|LTR|ERV1 -24023 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr2-11284 chr2 183550978 183551188 + 7.54 0.000 Intergenic L1PA7|LINE|L1 426640 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr12-7050 chr12 40388718 40388928 + 7.54 0.000 Intergenic LTR17|LTR|ERV1 -4571 NM_173600 283463 Hs.632712 NM_173600 MUC19 MUC-19 mucin 19, oligomeric protein-coding chr2-14485 chr2 225769870 225770080 + 7.54 0.000 Intergenic MER103C|DNA|hAT-Charlie 369089 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr8-3997 chr8 54482480 54482690 + 7.54 0.000 Intergenic AluSx1|SINE|Alu 24650 NM_022454 64321 Hs.98367 NM_022454 ENSG00000164736 SOX17 VUR3 SRY-box transcription factor 17 protein-coding chr1-9997 chr1 84463952 84464162 + 7.54 0.000 Intergenic LTR78B|LTR|ERV1 -15209 NM_025065 80135 Hs.481202 NM_025065 ENSG00000117133 RPF1 BXDC5 ribosome production factor 1 homolog protein-coding chr12-6816 chr12 12872147 12872357 + 7.54 0.000 Intergenic Intergenic -3225 NR_003932 387841 Hs.631728 NR_003932 ENSG00000234498 RPL13AP20 RPL13A_9_1211 ribosomal protein L13a pseudogene 20 pseudo chrX-4490 chrX 64471688 64471898 + 7.54 0.000 Intergenic L1MA9|LINE|L1 -76341 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr1-11216 chr1 244881228 244881438 + 7.54 0.000 Intergenic AluJo|SINE|Alu -16790 NM_031844 3192 Hs.106212 NM_004501 ENSG00000153187 HNRNPU EIEE54|GRIP120|HNRNPU-AS1|HNRPU|SAF-A|SAFA|U21.1|hnRNP U|pp120 heterogeneous nuclear ribonucleoprotein U protein-coding chr9-4237 chr9 81632598 81632808 + 7.54 0.000 intron (NM_005077, intron 8 of 19) intron (NM_005077, intron 8 of 19) 56832 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr11-7012 chr11 117716322 117716532 + 7.54 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 80789 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr1-6565 chr1 32431996 32432206 + 7.54 0.000 Intergenic L1MB5|LINE|L1 -32971 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr1-10235 chr1 116271642 116271852 + 7.54 0.000 Intergenic L3|LINE|CR1 -101497 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr19-4839 chr19 37817204 37817414 + 7.54 0.000 promoter-TSS (NR_040013) promoter-TSS (NR_040013) -102 NR_040013 644554 Hs.683930 NR_040013 LOC644554 - uncharacterized LOC644554 ncRNA chr5-7110 chr5 71777 71987 + 7.54 0.000 Intergenic Intergenic -20286 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr17-5508 chr17 42161152 42161362 + 7.54 0.000 intron (NM_012285, intron 15 of 16) MER5A|DNA|hAT-Charlie -6268 NM_004583 5878 Hs.650382 NM_004583 ENSG00000108774 RAB5C L1880|RAB5CL|RAB5L|RABL RAB5C, member RAS oncogene family protein-coding chr20-3162 chr20 40991794 40992004 + 7.54 0.000 intron (NR_145525, intron 1 of 2) intron (NR_145525, intron 1 of 2) 11186 NR_145524 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr4-6846 chr4 8937423 8937633 + 7.54 0.000 Intergenic L1MA4|LINE|L1 -65689 NM_001306142 3166 Hs.104134 NM_018942 ENSG00000215612 HMX1 H6|NKX5-3 H6 family homeobox 1 protein-coding chr2-13461 chr2 146175668 146175878 + 7.54 0.000 Intergenic Intergenic -411284 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chrX-3046 chrX 101069449 101069659 + 7.54 0.000 Intergenic AluSx1|SINE|Alu -9325 NM_021637 59353 Hs.45140 NM_021637 ENSG00000126950 TMEM35A TMEM35 transmembrane protein 35A protein-coding chr8-3154 chr8 81514277 81514487 + 7.54 0.000 Intergenic Intergenic 17008 NM_001105281 646486 Hs.586370 NM_001105281 ENSG00000197416 FABP12 - fatty acid binding protein 12 protein-coding chr10-6960 chr10 66394420 66394630 + 7.54 0.000 intron (NM_001127384, intron 11 of 17) intron (NM_001127384, intron 11 of 17) -531511 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr4-7006 chr4 23937074 23937284 + 7.54 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -47132 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr20-4064 chr20 38315373 38315583 + 7.54 0.000 intron (NM_001725, intron 5 of 14) intron (NM_001725, intron 5 of 14) 11328 NM_001725 671 Hs.529019 NM_001725 ENSG00000101425 BPI BPIFD1|rBPI bactericidal permeability increasing protein protein-coding chr8-4146 chr8 75970228 75970438 + 7.54 0.000 Intergenic Intergenic 430365 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr4-6577 chr4 189135752 189135962 + 7.54 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 359200 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr7-6033 chr7 108814479 108814689 + 7.54 0.000 Intergenic MSTA|LTR|ERVL-MaLR 70003 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr21-1617 chr21 19739019 19739229 + 7.54 0.000 Intergenic Intergenic 160631 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr15-3998 chr15 55566848 55567058 + 7.54 0.000 intron (NM_015617, intron 1 of 2) AluJb|SINE|Alu 21392 NM_001367806 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr10-5582 chr10 91370133 91370343 + 7.54 0.000 intron (NR_024467, intron 3 of 4) intron (NR_024467, intron 3 of 4) -38997 NM_001348365 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr17-3684 chr17 13792505 13792715 + 7.54 0.000 Intergenic Intergenic -190681 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr12-4236 chr12 111052554 111052764 + 7.54 0.000 intron (NM_015267, intron 1 of 21) intron (NM_015267, intron 1 of 21) 18494 NM_015267 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chrX-2770 chrX 130559745 130559955 + 7.54 0.000 Intergenic Intergenic 64909 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr15-3839 chr15 80474683 80474893 + 7.54 0.000 intron (NM_014862, intron 4 of 18) intron (NM_014862, intron 4 of 18) 70406 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr1-16179 chr1 206664154 206664364 + 7.54 0.000 Intergenic Intergenic -20646 NM_032960 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr4-5274 chr4 174524588 174524798 + 7.54 0.000 Intergenic MIRb|SINE|MIR -1795 NM_001145816 3248 Hs.596913 NM_000860 ENSG00000164120 HPGD 15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1 15-hydroxyprostaglandin dehydrogenase protein-coding chr2-14149 chr2 203743792 203744002 + 7.54 0.000 Intergenic Intergenic 37258 NM_001243077 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr1-6324 chr1 3179587 3179797 + 7.54 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 51717 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr8-1896 chr8 25185191 25185401 + 7.54 0.000 intron (NM_024940, intron 1 of 51) CpG 607 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr1-15994 chr1 196741243 196741453 + 7.54 0.000 intron (NM_000186, intron 18 of 21) THE1D|LTR|ERVL-MaLR -33452 NM_021023 10878 Hs.709217 NM_021023 ENSG00000116785 CFHR3 CFHL3|DOWN16|FHR-3|FHR3|HLF4 complement factor H related 3 protein-coding chr18-1025 chr18 70358094 70358304 + 7.54 0.000 Intergenic Intergenic -20019 NR_146458 102724895 NR_146458 LIVAR lnc18q22.2 liver cell viability associated lncRNA ncRNA chr5-5355 chr5 131983340 131983550 + 7.54 0.000 intron (NM_015256, intron 9 of 20) intron (NM_015256, intron 9 of 20) 28213 NM_001009185 23305 Hs.14945 NM_015256 ENSG00000164398 ACSL6 ACS2|FACL6|LACS 6|LACS2|LACS5 acyl-CoA synthetase long chain family member 6 protein-coding chr9-7420 chr9 22307182 22307392 + 7.54 0.000 Intergenic Intergenic -139537 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr10-6475 chr10 42598363 42598573 + 7.54 0.000 intron (NM_006955, intron 4 of 4) MER45R|DNA|hAT-Tip100 40102 NR_130951 7582 Hs.435774 NM_006955 ENSG00000196693 ZNF33B KOX2|KOX31|ZNF11B zinc finger protein 33B protein-coding chr4-8165 chr4 129645603 129645813 + 7.54 0.000 Intergenic Intergenic 125770 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr11-10685 chr11 128846709 128846919 + 7.54 0.000 intron (NM_153764, intron 1 of 1) MER90a|LTR|ERV1 -4345 NM_000220 3758 Hs.527830 NM_000220 ENSG00000151704 KCNJ1 KIR1.1|ROMK|ROMK1 potassium voltage-gated channel subfamily J member 1 protein-coding chr6-6731 chr6 1955920 1956130 + 7.54 0.000 intron (NM_001253846, intron 6 of 10) intron (NM_001253846, intron 6 of 10) 219966 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr10-9231 chr10 132949662 132949872 + 7.54 0.000 intron (NR_120627, intron 1 of 1) MER4B|LTR|ERV1 -2471 NR_120626 101927590 Hs.448598 NR_120626 ENSG00000232903 LINC01166 - long intergenic non-protein coding RNA 1166 ncRNA chr15-2050 chr15 56334237 56334447 + 7.54 0.000 Intergenic L1MA3|LINE|L1 -31082 NM_198524 374618 Hs.511476 NM_198524 ENSG00000151575 TEX9 - testis expressed 9 protein-coding chr11-6191 chr11 45564560 45564770 + 7.54 0.000 Intergenic L2a|LINE|L2 100957 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr11-2599 chr11 130091301 130091511 + 7.54 0.000 intron (NM_001243299, intron 1 of 16) SVA_F|Retroposon|SVA 20838 NM_001243299 334 Hs.370247 NM_001642 ENSG00000084234 APLP2 APLP-2|APPH|APPL2|CDEBP amyloid beta precursor like protein 2 protein-coding chr6-6328 chr6 49689035 49689245 + 7.54 0.000 Intergenic AluSq2|SINE|Alu 24403 NM_001142417 7180 Hs.2042 NM_003296 ENSG00000124490 CRISP2 CRISP-2|CT36|GAPDL5|TPX1|TSP1 cysteine rich secretory protein 2 protein-coding chrX-2335 chrX 57441958 57442168 + 7.54 0.000 intron (NR_148564, intron 8 of 11) L1PA4|LINE|L1 -149773 NM_007157 158586 Hs.156257 NM_007157 ENSG00000198455 ZXDB ZNF905|dJ83L6.1 zinc finger X-linked duplicated B protein-coding chr2-10413 chr2 191894795 191895005 + 7.54 0.000 Intergenic Intergenic -47812 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr7-8164 chr7 29442293 29442503 + 7.54 0.000 intron (NM_001293072, intron 6 of 12) intron (NM_001293072, intron 6 of 12) -37314 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr5-7610 chr5 44375121 44375331 + 7.54 0.000 intron (NM_004465, intron 1 of 2) L2c|LINE|L2 -13506 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr18-1820 chr18 15007754 15007964 + 7.54 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -37391 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr11-9098 chr11 32032635 32032845 + 7.54 0.000 Intergenic Intergenic 8578 NR_120527 100506675 Hs.446169 NR_120526 ENSG00000254584 LOC100506675 - uncharacterized LOC100506675 ncRNA chr10-4659 chr10 126549729 126549939 + 7.54 0.000 intron (NM_001350922, intron 2 of 8) L1MD1|LINE|L1 -28341 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr1-13272 chr1 227472862 227473072 + 7.54 0.000 Intergenic L2a|LINE|L2 -90589 NM_178549 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr8-2148 chr8 30501900 30502110 + 7.54 0.000 intron (NM_001008710, intron 4 of 8) intron (NM_001008710, intron 4 of 8) -116604 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr1-13556 chr1 7357167 7357377 + 7.54 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) 32482 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr3-7143 chr3 185150928 185151138 + 7.54 0.000 intron (NM_001025266, intron 1 of 1) intron (NM_001025266, intron 1 of 1) 2027 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr19-5885 chr19 46563420 46563630 + 7.54 0.000 intron (NM_001370550, intron 1 of 2) intron (NM_001370550, intron 1 of 2) 37391 NM_001370551 100506012 Hs.671661 NM_001205281 ENSG00000230510 PPP5D1 - PPP5 tetratricopeptide repeat domain containing 1 protein-coding chrX-1355 chrX 144938718 144938928 + 7.54 0.000 Intergenic MER52D|LTR|ERV1 -308680 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr15-4857 chr15 75055936 75056146 + 7.54 0.000 Intergenic L2a|LINE|L2 12755 NM_001301104 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chr2-11792 chr2 15782192 15782402 + 7.54 0.000 Intergenic Intergenic 91515 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr11-6736 chr11 82326599 82326809 + 7.54 0.000 intron (NR_120571, intron 3 of 7) L1M3e|LINE|L1 77209 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr3-9090 chr3 27964085 27964295 + 7.54 0.000 Intergenic Intergenic -130054 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr22-2606 chr22 31600426 31600636 + 7.54 0.000 intron (NM_001007467, intron 15 of 32) intron (NM_001007467, intron 15 of 32) 21000 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr18-1948 chr18 36197227 36197437 + 7.54 0.000 intron (NM_017947, intron 2 of 14) L3|LINE|CR1 9835 NM_017947 55034 Hs.405028 NM_017947 ENSG00000075643 MOCOS HMCS|MCS|MOS molybdenum cofactor sulfurase protein-coding chr5-8454 chr5 130306649 130306859 + 7.54 0.000 Intergenic L1PB4|LINE|L1 402289 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr20-2642 chr20 43686798 43687008 + 7.54 0.000 exon (NM_002466, exon 5 of 14) exon (NM_002466, exon 5 of 14) 19789 NM_002466 4605 Hs.179718 NM_002466 ENSG00000101057 MYBL2 B-MYB|BMYB MYB proto-oncogene like 2 protein-coding chr10-8676 chr10 100820942 100821152 + 7.54 0.000 intron (NM_003988, intron 7 of 10) intron (NM_003988, intron 7 of 10) 75336 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr9-6938 chr9 97567843 97568053 + 7.54 0.000 intron (NM_001166116, intron 7 of 9) intron (NM_001166116, intron 7 of 9) 65420 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr19-3605 chr19 50663318 50663528 + 7.54 0.000 intron (NM_016148, intron 23 of 23) L2a|LINE|L2 13978 NM_001195076 342918 Hs.531650 NM_001195076 ENSG00000235034 C19orf81 - chromosome 19 open reading frame 81 protein-coding chr7-3749 chr7 74650656 74650866 + 7.54 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -6904 NM_001280800 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr8-4560 chr8 126473436 126473646 + 7.54 0.000 Intergenic MER83|LTR|ERV1 84937 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr6-4813 chr6 80280432 80280642 + 7.54 0.000 intron (NR_134945, intron 10 of 10) Tigger3d|DNA|TcMar-Tigger 173866 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr1-8378 chr1 70265835 70266045 + 7.54 0.000 intron (NM_030816, intron 12 of 12) GA-rich|Low_complexity|Low_complexity 44560 NM_001350614 9295 Hs.479693 NM_004768 ENSG00000116754 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine and arginine rich splicing factor 11 protein-coding chr9-7817 chr9 81669343 81669553 + 7.54 0.000 intron (NM_005077, intron 4 of 19) intron (NM_005077, intron 4 of 19) 20087 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr1-13694 chr1 12778882 12779092 + 7.54 0.000 Intergenic Intergenic 4139 NM_001080830 390999 Hs.156406 NM_001080830 ENSG00000116726 PRAMEF12 - PRAME family member 12 protein-coding chr16-5926 chr16 3349543 3349753 + 7.54 0.000 Intergenic Intergenic -6241 NM_012368 4993 Hs.258574 NM_012368 ENSG00000168158 OR2C1 OLFmf3|OR2C2P olfactory receptor family 2 subfamily C member 1 protein-coding chr12-8346 chr12 131781946 131782156 + 7.54 0.000 intron (NM_004592, intron 14 of 17) intron (NM_004592, intron 14 of 17) -46342 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr2-6562 chr2 219055174 219055384 + 7.54 0.000 exon (NM_002181, exon 3 of 3) exon (NM_002181, exon 3 of 3) 3471 NR_036081 100422957 NR_036081 ENSG00000264755 MIR3131 mir-3131 microRNA 3131 ncRNA chr9-6480 chr9 93330832 93331042 + 7.54 0.000 3' UTR (NM_001368813, exon 3 of 3) 3' UTR (NM_001368813, exon 3 of 3) 15366 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr18-1156 chr18 11767075 11767285 + 7.54 0.000 intron (NM_001369387, intron 4 of 11) intron (NM_001369387, intron 4 of 11) 15095 NM_001369387 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr2-14439 chr2 222709411 222709621 + 7.54 0.000 intron (NM_058165, intron 5 of 5) intron (NM_058165, intron 5 of 5) 37858 NM_058165 116255 Hs.344090 NM_058165 ENSG00000124003 MOGAT1 DGAT2L|DGAT2L1|MGAT1 monoacylglycerol O-acyltransferase 1 protein-coding chr19-3170 chr19 40392761 40392971 + 7.54 0.000 TTS (NM_181882) TTS (NM_181882) -2685 NM_144685 147746 Hs.79363 NM_144685 ENSG00000160396 HIPK4 - homeodomain interacting protein kinase 4 protein-coding chr9-6212 chr9 103995375 103995585 + 7.54 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -4229 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr10-4320 chr10 22501022 22501232 + 7.54 0.000 Intergenic Intergenic -63198 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr5-4176 chr5 107474389 107474599 + 7.54 0.000 intron (NM_001962, intron 1 of 4) MamRTE1|LINE|RTE-BovB 196443 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr12-2805 chr12 109870868 109871078 + 7.54 0.000 intron (NM_016433, intron 1 of 4) intron (NM_016433, intron 1 of 4) 9568 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr10-3646 chr10 98792933 98793143 + 7.54 0.000 intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) 131530 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr5-4907 chr5 71730064 71730274 + 7.54 0.000 Intergenic Intergenic 10894 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr2-13431 chr2 142730536 142730746 + 7.54 0.000 Intergenic L1PA4|LINE|L1 -147023 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr5-5017 chr5 83952727 83952937 + 7.54 0.000 intron (NM_001278642, intron 9 of 9) intron (NM_001278642, intron 9 of 9) -231977 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr6-7017 chr6 22754130 22754340 + 7.54 0.000 Intergenic MLT2B2|LTR|ERVL -36311 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr1-15231 chr1 111940405 111940615 + 7.54 0.000 intron (NM_172198, intron 2 of 6) L1PA7|LINE|L1 30853 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr22-4169 chr22 45395939 45396149 + 7.54 0.000 intron (NM_148674, intron 7 of 24) intron (NM_148674, intron 7 of 24) 17555 NM_148674 27127 Hs.334176 NM_148674 ENSG00000077935 SMC1B SMC1BETA|SMC1L2 structural maintenance of chromosomes 1B protein-coding chr18-2754 chr18 140530 140740 + 7.54 0.000 Intergenic L1MC1|LINE|L1 -17922 NM_001037334 9097 Hs.464416 NM_005151 ENSG00000101557 USP14 TGT ubiquitin specific peptidase 14 protein-coding chr2-13581 chr2 156779310 156779520 + 7.54 0.000 Intergenic Intergenic 343036 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr1-12848 chr1 97204739 97204949 + 7.54 0.000 intron (NM_000110, intron 19 of 22) intron (NM_000110, intron 19 of 22) 108921 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr4-7456 chr4 69731207 69731417 + 7.54 0.000 intron (NM_014465, intron 6 of 7) MER1B|DNA|hAT-Charlie 29308 NM_014465 27284 Hs.129742 NM_014465 ENSG00000173597 SULT1B1 ST1B1|ST1B2|SULT1B2 sulfotransferase family 1B member 1 protein-coding chr21-784 chr21 45304254 45304464 + 7.54 0.000 Intergenic Intergenic 16307 NR_026943 642852 Hs.11637 NR_026943 ENSG00000223768 LINC00205 NCRNA00205 long intergenic non-protein coding RNA 205 ncRNA chr1-8548 chr1 162440948 162441158 + 7.54 0.000 Intergenic Intergenic -28917 NM_053282 117157 Hs.350581 NM_053282 ENSG00000198574 SH2D1B EAT2 SH2 domain containing 1B protein-coding chr2-8409 chr2 116317587 116317797 + 7.54 0.000 Intergenic Intergenic 973877 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr19-6602 chr19 28640160 28640370 + 7.54 0.000 intron (NR_110759, intron 5 of 9) intron (NR_110759, intron 5 of 9) 33577 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr4-5758 chr4 61490067 61490277 + 7.54 0.000 intron (NM_001371343, intron 2 of 23) intron (NM_001371343, intron 2 of 23) 288000 NM_001371342 chr20-3374 chr20 33980149 33980359 + 7.54 0.000 Intergenic LTR40c|LTR|ERVL -13657 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr12-2759 chr12 49282906 49283116 + 7.54 0.000 Intergenic SVA_D|Retroposon|SVA -12136 NM_006262 5630 Hs.37044 NM_006262 ENSG00000135406 PRPH NEF4|PRPH1 peripherin protein-coding chr18-3119 chr18 37346709 37346919 + 7.54 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 72354 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr22-3439 chr22 40327776 40327986 + 7.54 0.000 3' UTR (NM_001024843, exon 24 of 24) 3' UTR (NM_001024843, exon 24 of 24) -18619 NM_001363840 158 Hs.75527 NM_000026 ENSG00000239900 ADSL AMPS|ASASE|ASL adenylosuccinate lyase protein-coding chr18-2774 chr18 1496950 1497160 + 7.54 0.000 Intergenic L1PA17|LINE|L1 -137426 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr8-5567 chr8 79782168 79782378 + 7.54 0.000 intron (NR_125410, intron 3 of 3) intron (NR_125410, intron 3 of 3) 14131 NR_125410 101927067 Hs.144030 NR_125410 ENSG00000272138 LINC01607 - long intergenic non-protein coding RNA 1607 ncRNA chr6-5263 chr6 137472061 137472271 + 7.54 0.000 Intergenic Intergenic 22228 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr8-2027 chr8 103255942 103256152 + 7.54 0.000 intron (NR_148216, intron 1 of 1) intron (NR_148216, intron 1 of 1) -42447 NM_001164615 8323 Hs.591863 NM_003506 ENSG00000164930 FZD6 FZ-6|FZ6|HFZ6|NDNC10 frizzled class receptor 6 protein-coding chr2-12692 chr2 76754339 76754549 + 7.54 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) -231521 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr16-3756 chr16 24022156 24022366 + 7.54 0.000 intron (NM_002738, intron 3 of 16) intron (NM_002738, intron 3 of 16) -180855 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr7-8853 chr7 88653606 88653816 + 7.54 0.000 Intergenic L1MEi|LINE|L1 -105989 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chr11-9572 chr11 64899322 64899532 + 7.54 0.000 promoter-TSS (NR_106808) promoter-TSS (NR_106808) -990 NR_106808 102466192 NR_106808 ENSG00000274986 MIR6750 hsa-mir-6750 microRNA 6750 ncRNA chr4-5756 chr4 60326738 60326948 + 7.54 0.000 Intergenic Intergenic -595776 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chrX-4766 chrX 95582734 95582944 + 7.54 0.000 Intergenic L1MC3|LINE|L1 -519613 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chrX-1365 chrX 150007550 150007760 + 7.54 0.000 intron (NR_027456, intron 9 of 11) intron (NR_027456, intron 9 of 11) 69107 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr3-7379 chr3 68919220 68919430 + 7.54 0.000 intron (NM_001005527, intron 1 of 5) intron (NM_001005527, intron 1 of 5) 13222 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr10-3362 chr10 15790148 15790358 + 7.54 0.000 intron (NM_024948, intron 11 of 14) intron (NM_024948, intron 11 of 14) -69918 NM_001291494 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr5-3380 chr5 140481842 140482052 + 7.54 0.000 intron (NM_020690, intron 10 of 35) intron (NM_020690, intron 10 of 35) -65715 NM_003732 8637 Hs.594084 NM_003732 ENSG00000243056 EIF4EBP3 4E-BP3|4EBP3 eukaryotic translation initiation factor 4E binding protein 3 protein-coding chr2-10969 chr2 88602364 88602574 + 7.54 0.000 intron (NM_004836, intron 2 of 16) intron (NM_004836, intron 2 of 16) 22460 NM_001313915 9451 Hs.591589 NM_004836 ENSG00000172071 EIF2AK3 PEK|PERK|WRS eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding chr6-2513 chr6 149451398 149451608 + 7.54 0.000 intron (NM_207360, intron 5 of 5) CpG 33511 NM_207360 340152 Hs.632618 NM_207360 ENSG00000178199 ZC3H12D C6orf95|MCPIP4|TFL|dJ281H8.1|p34 zinc finger CCCH-type containing 12D protein-coding chr1-13872 chr1 21494067 21494277 + 7.54 0.000 Intergenic Intergenic -14812 NM_001369805 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr2-13015 chr2 107765111 107765321 + 7.54 0.000 intron (NR_126370, intron 2 of 4) L1MB4|LINE|L1 11104 NR_126369 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chr11-10239 chr11 100619982 100620192 + 7.54 0.000 Intergenic Intergenic -67201 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr22-2518 chr22 24018279 24018489 + 7.54 0.000 intron (NM_001199281, intron 1 of 36) L1MC4a|LINE|L1 7014 NM_001199281 23523 Hs.517478 NM_012295 ENSG00000099991 CABIN1 CAIN|KB-318B8.7|PPP3IN calcineurin binding protein 1 protein-coding chr11-8009 chr11 13818142 13818352 + 7.54 0.000 intron (NR_149108, intron 3 of 3) L2a|LINE|L2 33861 NR_149108 105376562 Hs.577257 NR_149108 ENSG00000255411 LINC02548 - long intergenic non-protein coding RNA 2548 ncRNA chr2-13280 chr2 128273380 128273590 + 7.54 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 45383 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chrX-3936 chrX 9902903 9903113 + 7.54 0.000 intron (NM_001649, intron 5 of 9) intron (NM_001649, intron 5 of 9) -9364 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr9-4242 chr9 87447335 87447545 + 7.54 0.000 Intergenic Intergenic -49788 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr15-2549 chr15 48720418 48720628 + 7.54 0.000 Intergenic L1ME4b|LINE|L1 -74735 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr2-10707 chr2 27227130 27227340 + 7.54 0.000 intron (NM_001306079, intron 14 of 42) intron (NM_001306079, intron 14 of 42) 9845 NM_001306079 790 Hs.377010 NM_004341 ENSG00000084774 CAD CDG1Z|EIEE50|GATD4 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase protein-coding chrX-2903 chrX 150378310 150378520 + 7.54 0.000 intron (NM_001177465, intron 1 of 4) L1MC4a|LINE|L1 15098 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr7-9344 chr7 129145979 129146189 + 7.54 0.000 intron (NM_178562, intron 1 of 7) intron (NM_178562, intron 1 of 7) 1377 NM_178562 340348 Hs.27267 NM_178562 ENSG00000158457 TSPAN33 PEN|PEN.|TSPAN-33 tetraspanin 33 protein-coding chr12-6880 chr12 20624835 20625045 + 7.54 0.000 intron (NM_000921, intron 5 of 15) intron (NM_000921, intron 5 of 15) 53076 NM_001244683 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr17-4234 chr17 44899302 44899512 + 7.54 0.000 promoter-TSS (NM_001258399) promoter-TSS (NM_001258399) 38 NM_004247 9343 Hs.151787 NM_004247 ENSG00000108883 EFTUD2 MFDGA|MFDM|SNRNP116|Snrp116|Snu114|U5-116KD elongation factor Tu GTP binding domain containing 2 protein-coding chr7-6572 chr7 73747318 73747528 + 7.54 0.000 Intergenic AluSc8|SINE|Alu -8556 NM_001321382 83451 Hs.647045 NM_148912 ENSG00000106077 ABHD11 PP1226|WBSCR21 abhydrolase domain containing 11 protein-coding chr16-1947 chr16 18925630 18925840 + 7.54 0.000 intron (NM_015092, intron 1 of 62) CpG 669 NM_015092 23049 Hs.460179 NM_015092 ENSG00000157106 SMG1 61E3.4|ATX|LIP SMG1 nonsense mediated mRNA decay associated PI3K related kinase protein-coding chr5-7988 chr5 84488142 84488352 + 7.54 0.000 Intergenic Intergenic -103367 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr11-5183 chr11 9449356 9449566 + 7.54 0.000 Intergenic AluSx|SINE|Alu 11237 NR_036539 644656 Hs.597846 NR_036539 ENSG00000268403 LOC644656 - uncharacterized LOC644656 ncRNA chr6-5857 chr6 36141803 36142013 + 7.54 0.000 non-coding (NR_072996, exon 10 of 10) non-coding (NR_072996, exon 10 of 10) 11395 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr1-10477 chr1 162878109 162878319 + 7.54 0.000 Intergenic Intergenic -9399 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr15-4271 chr15 35684926 35685136 + 7.54 0.000 intron (NR_038251, intron 1 of 2) L1MEd|LINE|L1 138836 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr4-7747 chr4 93196633 93196843 + 7.54 0.000 intron (NM_001286838, intron 3 of 14) intron (NM_001286838, intron 3 of 14) -632015 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr3-6815 chr3 146140161 146140371 + 7.54 0.000 intron (NM_182943, intron 1 of 19) intron (NM_182943, intron 1 of 19) 20918 NM_182943 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr21-1436 chr21 26013892 26014102 + 7.54 0.000 intron (NM_001204301, intron 6 of 16) intron (NM_001204301, intron 6 of 16) 126393 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr20-1362 chr20 38114332 38114542 + 7.54 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 50833 NM_198951 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr14-3059 chr14 61158475 61158685 + 7.54 0.000 Intergenic AluJb|SINE|Alu 122758 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr20-2451 chr20 25957137 25957347 + 7.54 0.000 intron (NR_110003, intron 2 of 3) AluSc8|SINE|Alu 1430 NR_110003 101926955 Hs.625431 NR_110003 ENSG00000226203 LINC01733 - long intergenic non-protein coding RNA 1733 ncRNA chr3-3669 chr3 141457758 141457968 + 7.54 0.000 Intergenic Intergenic -29164 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr7-8719 chr7 75665821 75666031 + 7.54 0.000 intron (NM_005338, intron 1 of 30) intron (NM_005338, intron 1 of 30) 73015 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr6-6900 chr6 12866008 12866218 + 7.54 0.000 intron (NM_001322308, intron 3 of 13) intron (NM_001322308, intron 3 of 13) -91243 NM_001322311 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr8-5959 chr8 20492345 20492555 + 7.54 0.000 Intergenic Intergenic 122476 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr5-8232 chr5 109833958 109834168 + 7.54 0.000 intron (NM_002372, intron 16 of 21) intron (NM_002372, intron 16 of 21) -49119 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr1-10514 chr1 167557639 167557849 + 7.54 0.000 Intergenic Intergenic -3982 NM_003851 8804 Hs.5710 NM_003851 ENSG00000143162 CREG1 CREG cellular repressor of E1A stimulated genes 1 protein-coding chrX-3673 chrX 104195521 104195731 + 7.54 0.000 3' UTR (NM_207318, exon 6 of 6) 3' UTR (NM_207318, exon 6 of 6) 29173 NM_207318 139231 Hs.496535 NM_207318 ENSG00000123575 FAM199X CXorf39 family with sequence similarity 199, X-linked protein-coding chr14-5206 chr14 95873126 95873336 + 7.54 0.000 Intergenic Intergenic -3161 NR_132399 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr10-9066 chr10 124858898 124859108 + 7.54 0.000 Intergenic AluSz6|SINE|Alu 57184 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr20-1912 chr20 3028625 3028835 + 7.54 0.000 intron (NM_080841, intron 19 of 22) L2|LINE|L2 -14892 NM_001310220 2797 Hs.129715 NM_001501 ENSG00000125787 GNRH2 GnRH-II|LH-RHII gonadotropin releasing hormone 2 protein-coding chr10-7376 chr10 2625124 2625334 + 7.54 0.000 Intergenic Intergenic -123767 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr22-3085 chr22 44140945 44141155 + 7.54 0.000 intron (NM_001243386, intron 8 of 11) intron (NM_001243386, intron 8 of 11) -31906 NM_001137605 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr3-4437 chr3 25473216 25473426 + 7.54 0.000 intron (NR_110892, intron 2 of 6) intron (NR_110892, intron 2 of 6) 15011 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr3-7375 chr3 65856885 65857095 + 7.54 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -36826 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr19-4907 chr19 41939716 41939926 + 7.54 0.000 Intergenic MSR1|Satellite|Satellite 11001 NR_135626 100505585 NR_135626 ENSG00000076928 LOC100505585 - uncharacterized LOC100505585 ncRNA chr22-2742 chr22 39635750 39635960 + 7.54 0.000 intron (NM_001003406, intron 5 of 35) L2b|LINE|L2 65102 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr12-7103 chr12 45081807 45082017 + 7.54 0.000 Intergenic L2a|LINE|L2 -16501 NR_026583 83956 Hs.650500 NM_032032 RACGAP1P FKSG42 Rac GTPase activating protein 1 pseudogene pseudo chr10-4501 chr10 86224473 86224683 + 7.54 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 40210 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr11-4215 chr11 63710540 63710750 + 7.54 0.000 intron (NM_201429, intron 2 of 7) intron (NM_201429, intron 2 of 7) 29145 NM_001265589 10313 Hs.743229 NM_006054 ENSG00000133318 RTN3 ASYIP|HAP|NSPL2|NSPLII|RTN3-A1 reticulon 3 protein-coding chr12-7838 chr12 101653489 101653699 + 7.54 0.000 intron (NM_206821, intron 16 of 28) intron (NM_206821, intron 16 of 28) -44046 NM_020244 56994 Hs.293077 NM_020244 ENSG00000111666 CHPT1 CPT|CPT1 choline phosphotransferase 1 protein-coding chr9-8187 chr9 107176925 107177135 + 7.54 0.000 Intergenic Intergenic -74042 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr6-7906 chr6 109071741 109071951 + 7.54 0.000 intron (NM_014454, intron 1 of 9) intron (NM_014454, intron 1 of 9) -22776 NM_001083535 285753 Hs.632616 NM_173830 ENSG00000183137 CEP57L1 C6orf182|bA487F23.2|cep57R centrosomal protein 57 like 1 protein-coding chr3-9353 chr3 46628885 46629095 + 7.54 0.000 Intergenic Intergenic 16465 NM_001195442 100132146 Hs.679623 NM_001195442 ENSG00000283473 FAM240A - family with sequence similarity 240 member A protein-coding chr6-2967 chr6 37634189 37634399 + 7.54 0.000 3' UTR (NM_153487, exon 17 of 17) 3' UTR (NM_153487, exon 17 of 17) 63589 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr12-2526 chr12 96267018 96267228 + 7.54 0.000 exon (NM_005230, exon 5 of 5) exon (NM_005230, exon 5 of 5) 11625 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr4-1352 chr4 1087307 1087517 + 7.54 0.000 intron (NM_001366918, intron 4 of 10) intron (NM_001366918, intron 4 of 10) 26152 NM_194439 285498 Hs.248290 NM_194439 ENSG00000178222 RNF212 ZHP3 ring finger protein 212 protein-coding chrX-5141 chrX 130587240 130587450 + 7.54 0.000 Intergenic MIR|SINE|MIR 92404 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr7-9379 chr7 130804695 130804905 + 7.54 0.000 Intergenic MER63A|DNA|hAT-Blackjack -70767 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr16-3107 chr16 68473329 68473539 + 7.54 0.000 Intergenic Intergenic -24926 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr10-5241 chr10 65410087 65410297 + 7.54 0.000 Intergenic LTR5_Hs|LTR|ERVK -161233 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr12-7309 chr12 54054710 54054920 + 7.54 0.000 intron (NM_153633, intron 1 of 1) intron (NM_153633, intron 1 of 1) 980 NM_153633 3221 Hs.549040 NM_014620 ENSG00000198353 HOXC4 HOX3|HOX3E|cp19 homeobox C4 protein-coding chr1-8300 chr1 43717332 43717542 + 7.54 0.000 intron (NR_125986, intron 3 of 3) intron (NR_125986, intron 3 of 3) 9901 NM_001270460 6487 Hs.597915 NM_006279 ENSG00000126091 ST3GAL3 EIEE15|MRT12|SIAT6|ST3GALII|ST3Gal III|ST3GalIII|ST3N ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding chr11-5127 chr11 128709535 128709745 + 7.54 0.000 intron (NM_002017, intron 1 of 8) intron (NM_002017, intron 1 of 8) -13617 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr5-7708 chr5 57987175 57987385 + 7.54 0.000 Intergenic MER66B|LTR|ERV1 -88118 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr13-4261 chr13 97502978 97503188 + 7.54 0.000 Intergenic Intergenic 68914 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr2-14045 chr2 195199827 195200037 + 7.54 0.000 Intergenic Intergenic -457026 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr21-1769 chr21 36545907 36546117 + 7.54 0.000 intron (NM_001146077, intron 1 of 2) intron (NM_001146077, intron 1 of 2) -3228 NM_001146078 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr7-7770 chr7 1698622 1698832 + 7.54 0.000 intron (NM_001128636, intron 1 of 2) L1ME4a|LINE|L1 10608 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr5-1289 chr5 196466 196676 + 7.54 0.000 TTS (NM_145265) TTS (NM_145265) 5076 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr14-2662 chr14 71898568 71898778 + 7.54 0.000 Intergenic L1PA8|LINE|L1 -33498 NM_001204423 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr4-4336 chr4 35831626 35831836 + 7.54 0.000 Intergenic L1PA3|LINE|L1 412208 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr8-4233 chr8 88582809 88583019 + 7.54 0.000 Intergenic L1PA10|LINE|L1 -255431 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr5-7486 chr5 34627943 34628153 + 7.54 0.000 Intergenic Intergenic -28280 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5-6346 chr5 136244401 136244611 + 7.54 0.000 intron (NM_020389, intron 7 of 11) intron (NM_020389, intron 7 of 11) 17851 NR_133682 106478968 Hs.637713 NR_133682 ENSG00000250947 TRPC7-AS2 CTB-28J9.2 TRPC7 antisense RNA 2 ncRNA chr8-4179 chr8 80655976 80656186 + 7.54 0.000 intron (NM_001033723, intron 7 of 8) MLT1A|LTR|ERVL-MaLR 169855 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr12-7100 chr12 44778925 44779135 + 7.54 0.000 intron (NM_006159, intron 6 of 20) intron (NM_006159, intron 6 of 20) 96631 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr17-4505 chr17 73411409 73411619 + 7.54 0.000 intron (NM_001144952, intron 18 of 44) intron (NM_001144952, intron 18 of 44) -99513 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr19-4115 chr19 17816458 17816668 + 7.54 0.000 TTS (NM_001265587) TTS (NM_001265587) 4956 NM_001265587 3640 Hs.37062 NM_005543 ENSG00000248099 INSL3 RLF|RLNL|ley-I-L insulin like 3 protein-coding chr8-3440 chr8 81961236 81961446 + 7.54 0.000 Intergenic Intergenic -119055 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr1-16313 chr1 216612361 216612571 + 7.54 0.000 intron (NM_001243505, intron 3 of 6) intron (NM_001243505, intron 3 of 6) 110963 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr1-9911 chr1 72536985 72537195 + 7.54 0.000 Intergenic LTR32|LTR|ERVL -254551 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr1-6765 chr1 76678907 76679117 + 7.54 0.000 Intergenic Intergenic 100255 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr5-3294 chr5 119036098 119036308 + 7.54 0.000 intron (NR_134249, intron 1 of 8) intron (NR_134249, intron 1 of 8) 1458 NR_134249 105379143 Hs.636285 NR_134249 ENSG00000249494 LOC105379143 - uncharacterized LOC105379143 ncRNA chr18-2287 chr18 76911906 76912116 + 7.54 0.000 intron (NM_001306089, intron 16 of 30) intron (NM_001306089, intron 16 of 30) 87851 NM_007345 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr2-6807 chr2 54755760 54755970 + 7.54 0.000 intron (NM_001039753, intron 1 of 40) AluJb|SINE|Alu 30853 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr5-6182 chr5 59041813 59042023 + 7.54 0.000 intron (NM_006203, intron 5 of 14) intron (NM_006203, intron 5 of 14) -2442 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-13933 chr2 183842323 183842533 + 7.54 0.000 Intergenic L1PA7|LINE|L1 -536547 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr11-9047 chr11 27745985 27746195 + 7.54 0.000 Intergenic Intergenic -24060 NM_170731 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr1-11710 chr1 9360135 9360345 + 7.54 0.000 intron (NM_025106, intron 2 of 2) L2|LINE|L2 67346 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr11-3917 chr11 120884877 120885087 + 7.54 0.000 intron (NM_001282470, intron 10 of 19) intron (NM_001282470, intron 10 of 19) 9815 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr18-2595 chr18 21629606 21629816 + 7.54 0.000 3' UTR (NM_006938, exon 4 of 4) 3' UTR (NM_006938, exon 4 of 4) 17397 NM_006938 6632 Hs.464734 NM_006938 ENSG00000167088 SNRPD1 HsT2456|SMD1|SNRPD|Sm-D1 small nuclear ribonucleoprotein D1 polypeptide protein-coding chr1-10591 chr1 175957425 175957635 + 7.54 0.000 intron (NM_022457, intron 18 of 19) Tigger3|DNA|TcMar-Tigger 10949 NR_162097 113839518 NR_162097 MIR1843 - microRNA 1843 ncRNA chr19-2796 chr19 47315363 47315573 + 7.54 0.000 intron (NM_001736, intron 1 of 1) intron (NM_001736, intron 1 of 1) 5607 NM_001736 728 Hs.2161 NM_001736 ENSG00000197405 C5AR1 C5A|C5AR|C5R1|CD88 complement C5a receptor 1 protein-coding chr1-10040 chr1 89379383 89379593 + 7.54 0.000 intron (NM_198460, intron 5 of 10) intron (NM_198460, intron 5 of 10) 15611 NM_001320257 163351 Hs.254338 NM_198460 ENSG00000183347 GBP6 - guanylate binding protein family member 6 protein-coding chr21-1536 chr21 45904574 45904784 + 7.54 0.000 intron (NR_145493, intron 6 of 12) MER89-int|LTR|ERV1 54718 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr6-6192 chr6 12491120 12491330 + 7.54 0.000 Intergenic Intergenic 94179 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr13-2798 chr13 101669951 101670161 + 7.54 0.000 intron (NM_001271754, intron 6 of 10) MER65-int|LTR|ERV1 180104 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr12-5282 chr12 110528337 110528547 + 7.54 0.000 intron (NM_001368056, intron 9 of 9) MER20|DNA|hAT-Charlie 26111 NM_001286531 144715 Hs.97794 NM_152442 ENSG00000151164 RAD9B - RAD9 checkpoint clamp component B protein-coding chr4-4770 chr4 99534068 99534278 + 7.54 0.000 intron (NM_032149, intron 5 of 8) L1PA11|LINE|L1 23152 NM_032149 84103 Hs.97501 NM_032149 ENSG00000138813 C4orf17 - chromosome 4 open reading frame 17 protein-coding chr2-9851 chr2 174434704 174434914 + 7.54 0.000 3' UTR (NM_152529, exon 16 of 16) 3' UTR (NM_152529, exon 16 of 16) 39079 NM_024583 79634 Hs.470679 NM_024583 ENSG00000144306 SCRN3 SES3 secernin 3 protein-coding chr19-3290 chr19 3907078 3907288 + 7.54 0.000 intron (NM_033064, intron 4 of 12) AluJr|SINE|Alu -25920 NM_001289117 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr2-14270 chr2 215098656 215098866 + 7.54 0.000 intron (NR_103740, intron 2 of 54) intron (NR_103740, intron 2 of 54) 39865 NM_173076 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr10-5520 chr10 84260879 84261089 + 7.54 0.000 Intergenic Charlie8|DNA|hAT-Charlie 15931 NM_001012720 5995 Hs.1544 NM_002921 ENSG00000148604 RGR RP44 retinal G protein coupled receptor protein-coding chr1-12072 chr1 150171697 150171907 + 7.54 0.000 intron (NR_135098, intron 2 of 3) AluJb|SINE|Alu 11074 NR_135098 105371433 Hs.599366 NR_135098 LOC105371433 - uncharacterized LOC105371433 ncRNA chr8-7482 chr8 142555350 142555560 + 7.54 0.000 Intergenic MER21B|LTR|ERVL 59024 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr13-2755 chr13 98548960 98549170 + 7.54 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) -26940 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr17-4978 chr17 80570286 80570496 + 7.54 0.000 intron (NM_020761, intron 1 of 33) intron (NM_020761, intron 1 of 33) 25553 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr10-7765 chr10 34208599 34208809 + 7.54 0.000 intron (NM_001184789, intron 20 of 22) intron (NM_001184789, intron 20 of 22) -436024 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr14-2065 chr14 68577893 68578103 + 7.54 0.000 intron (NM_001321818, intron 10 of 10) MamRTE1|LINE|RTE-BovB 50789 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr15-2756 chr15 26046219 26046429 + 7.54 0.000 intron (NR_040082, intron 2 of 4) AluY|SINE|Alu -69489 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr5-2561 chr5 2034868 2035078 + 7.54 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 147642 NR_109912 101929081 Hs.519180 NR_109912 ENSG00000249326 CTD-2194D22.4 - uncharacterized LOC101929081 ncRNA chr13-4390 chr13 109205296 109205506 + 7.54 0.000 intron (NM_015011, intron 34 of 34) intron (NM_015011, intron 34 of 34) -38098 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr12-3807 chr12 63473969 63474179 + 7.54 0.000 Intergenic MIR|SINE|MIR 194419 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding chr7-7510 chr7 102450914 102451124 + 7.54 0.000 3' UTR (NM_001271818, exon 4 of 4) 3' UTR (NM_001271818, exon 4 of 4) 13844 NM_017621 54784 Hs.658598 NM_017621 ENSG00000160993 ALKBH4 ABH4 alkB homolog 4, lysine demethylase protein-coding chr17-7039 chr17 60991905 60992115 + 7.54 0.000 intron (NM_001330413, intron 15 of 25) L1MB5|LINE|L1 314159 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr11-7611 chr11 45817338 45817548 + 7.54 0.000 Intergenic MIRb|SINE|MIR 12353 NM_018389 55343 Hs.12211 NM_018389 ENSG00000181830 SLC35C1 CDG2C|FUCT1 solute carrier family 35 member C1 protein-coding chr7-9440 chr7 134285375 134285585 + 7.54 0.000 Intergenic ERVL-E-int|LTR|ERVL 31450 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr6-8022 chr6 118299644 118299854 + 7.54 0.000 intron (NM_001029858, intron 7 of 7) Charlie4a|DNA|hAT-Charlie -201624 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr3-6231 chr3 65925445 65925655 + 7.54 0.000 TTS (NR_046575) TTS (NR_046575) 29008 NR_145422 151877 Hs.476636 NR_145422 ENSG00000272610 MAGI1-IT1 - MAGI1 intronic transcript 1 ncRNA chr1-11914 chr1 54689089 54689299 + 7.54 0.000 intron (NM_001039464, intron 15 of 23) MLT1C|LTR|ERVL-MaLR -26628 NM_001291333 7268 Hs.412482 NM_004623 ENSG00000243725 TTC4 CNS1 tetratricopeptide repeat domain 4 protein-coding chr4-5493 chr4 78299991 78300201 + 7.54 0.000 intron (NM_001166133, intron 14 of 41) MamRTE1|LINE|RTE-BovB 11111 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr15-3286 chr15 77655620 77655830 + 7.54 0.000 intron (NM_001301195, intron 3 of 3) MIRb|SINE|MIR -4326 NR_120362 101929478 Hs.569510 NR_120361 ENSG00000259281 LINGO1-AS2 - LINGO1 antisense RNA 2 ncRNA chr19-4530 chr19 8460729 8460939 + 7.54 0.000 intron (NM_001297418, intron 3 of 13) intron (NM_001297418, intron 3 of 13) 15859 NM_001297418 4670 Hs.465808 NM_005968 ENSG00000099783 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding chr2-8080 chr2 74369819 74370029 + 7.54 0.000 intron (NM_004082, intron 13 of 31) intron (NM_004082, intron 13 of 31) 4811 NM_023019 1639 Hs.516111 NM_004082 ENSG00000204843 DCTN1 DAP-150|DP-150|P135 dynactin subunit 1 protein-coding chr18-3138 chr18 39486325 39486535 + 7.54 0.000 intron (NR_024391, intron 3 of 3) MER102b|DNA|hAT-Charlie 135745 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr3-10308 chr3 126492453 126492663 + 7.54 0.000 intron (NM_001165974, intron 16 of 20) intron (NM_001165974, intron 16 of 20) -16639 NM_001040653 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr2-6212 chr2 25720687 25720897 + 7.54 0.000 Intergenic L2b|LINE|L2 -47118 NM_001256304 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr18-738 chr18 51464053 51464263 + 7.54 0.000 intron (NR_040074, intron 1 of 2) intron (NR_040074, intron 1 of 2) 72116 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr8-4403 chr8 105772724 105772934 + 7.54 0.000 intron (NM_001362837, intron 5 of 7) intron (NM_001362837, intron 5 of 7) 287674 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr6-6661 chr6 160559783 160559993 + 7.54 0.000 intron (NM_005577, intron 28 of 38) L1PA7|LINE|L1 -48764 NR_028092 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr18-2151 chr18 57436061 57436271 + 7.54 0.000 exon (NM_004852, exon 1 of 2) exon (NM_004852, exon 1 of 2) 792 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr4-7860 chr4 102981016 102981226 + 7.54 0.000 intron (NR_047513, intron 3 of 10) L1MC1|LINE|L1 38584 NR_047515 150159 Hs.666728 NM_139173 ENSG00000164037 SLC9B1 NHA1|NHEDC1 solute carrier family 9 member B1 protein-coding chr17-7482 chr17 15998669 15998879 + 7.54 0.000 intron (NM_001042697, intron 1 of 4) AluSq2|SINE|Alu 930 NM_001042697 125150 Hs.593985 NM_001042697 ENSG00000214941 ZSWIM7 SWS1 zinc finger SWIM-type containing 7 protein-coding chr10-3965 chr10 112634259 112634469 + 7.54 0.000 TTS (NR_036177) TTS (NR_036177) 194 NR_036177 100422909 NR_036177 ENSG00000264763 MIR4295 - microRNA 4295 ncRNA chr9-7595 chr9 36760459 36760669 + 7.54 0.000 Intergenic MIRc|SINE|MIR 63035 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr10-4146 chr10 80707500 80707710 + 7.54 0.000 Intergenic Intergenic 57808 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr16-3010 chr16 30009487 30009697 + 7.54 0.000 intron (NM_001282063, intron 3 of 11) intron (NM_001282063, intron 3 of 11) 1435 NR_104090 8448 Hs.355281 NM_003586 ENSG00000149927 DOC2A Doc2 double C2 domain alpha protein-coding chr11-7140 chr11 126095134 126095344 + 7.54 0.000 Intergenic Intergenic -31947 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chrX-2482 chrX 87418007 87418217 + 7.54 0.000 Intergenic L1PB1|LINE|L1 -99690 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr20-2331 chr20 10556021 10556231 + 7.54 0.000 intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 93569 NR_106930 102465525 NR_106930 ENSG00000273745 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA chr2-9024 chr2 197372233 197372443 + 7.54 0.000 Intergenic AluSz|SINE|Alu -61558 NM_153697 91526 Hs.432706 NM_153697 ENSG00000065413 ANKRD44 PP6-ARS-B ankyrin repeat domain 44 protein-coding chr8-6942 chr8 104411837 104412047 + 7.54 0.000 intron (NM_001385, intron 7 of 9) intron (NM_001385, intron 7 of 9) 55113 NM_001385 1807 Hs.443161 NM_001385 ENSG00000147647 DPYS DHP|DHPase dihydropyrimidinase protein-coding chr1-11039 chr1 223193117 223193327 + 7.54 0.000 Intergenic Intergenic -49974 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr5-4314 chr5 153684937 153685147 + 7.54 0.000 intron (NM_000827, intron 7 of 15) intron (NM_000827, intron 7 of 15) 192870 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr2-13302 chr2 129727439 129727649 + 7.54 0.000 Intergenic Intergenic 149947 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr15-4303 chr15 38844133 38844343 + 7.54 0.000 Intergenic Intergenic 147640 NR_160786 chr1-7521 chr1 156734317 156734527 + 7.54 0.000 exon (NM_015997, exon 6 of 8) exon (NM_015997, exon 6 of 8) -5656 NM_001370151 81875 Hs.301904 NM_030980 ENSG00000143319 ISG20L2 HSD38 interferon stimulated exonuclease gene 20 like 2 protein-coding chr19-3931 chr19 47855966 47856176 + 7.54 0.000 Intergenic MER90a|LTR|ERV1 30244 NM_003167 6822 Hs.515835 NM_003167 ENSG00000105398 SULT2A1 DHEA-ST|DHEAS|HST|ST2|ST2A1|ST2A3|STD|hSTa sulfotransferase family 2A member 1 protein-coding chr5-8376 chr5 123179389 123179599 + 7.54 0.000 intron (NM_001136239, intron 6 of 7) intron (NM_001136239, intron 6 of 7) -89178 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr6-5204 chr6 132365291 132365501 + 7.54 0.000 intron (NM_015529, intron 4 of 11) intron (NM_015529, intron 4 of 11) 36079 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr10-7628 chr10 22844210 22844420 + 7.54 0.000 Intergenic LTR85b|LTR|Gypsy? -83709 NM_001282747 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding chr1-10928 chr1 210996224 210996434 + 7.54 0.000 intron (NM_002238, intron 6 of 10) L1P1|LINE|L1 137045 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA chr11-8828 chr11 12187412 12187622 + 7.54 0.000 intron (NR_144420, intron 3 of 27) intron (NR_144420, intron 3 of 27) 23834 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr13-3586 chr13 27377810 27378020 + 7.54 0.000 Intergenic AluJb|SINE|Alu -46704 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr19-2339 chr19 45219337 45219547 + 7.54 0.000 intron (NM_138568, intron 6 of 9) intron (NM_138568, intron 6 of 9) 14769 NM_138568 90332 Hs.337557 NM_138568 ENSG00000283632 EXOC3L2 XTP7 exocyst complex component 3 like 2 protein-coding chr12-4611 chr12 40154595 40154805 + 7.54 0.000 Intergenic Intergenic -1539 NR_146526 105369734 NR_146526 LINC02471 - long intergenic non-protein coding RNA 2471 ncRNA chr8-4155 chr8 77221257 77221467 + 7.54 0.000 Intergenic MLT2F|LTR|ERVL -220318 NM_001172087 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding chr9-5893 chr9 132336690 132336900 + 7.54 0.000 intron (NM_001351527, intron 5 of 25) AluSx|SINE|Alu 18061 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr13-1629 chr13 51802586 51802796 + 7.54 0.000 intron (NM_001031719, intron 1 of 7) intron (NM_001031719, intron 1 of 7) 1471 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr6-8283 chr6 142514707 142514917 + 7.54 0.000 Intergenic L1PB1|LINE|L1 123024 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr10-9025 chr10 122959433 122959643 + 7.54 0.000 Intergenic Intergenic -5311 NM_024942 80007 Hs.501286 NM_024942 ENSG00000119965 C10orf88 - chromosome 10 open reading frame 88 protein-coding chr7-3656 chr7 44333666 44333876 + 7.54 0.000 Intergenic Intergenic -8140 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr3-10963 chr3 177126064 177126274 + 7.54 0.000 intron (NM_001321194, intron 1 of 16) intron (NM_001321194, intron 1 of 16) 70309 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr1-13021 chr1 163582173 163582383 + 7.54 0.000 Intergenic Intergenic -159087 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr1-7067 chr1 183292664 183292874 + 7.54 0.000 intron (NM_170706, intron 3 of 10) intron (NM_170706, intron 3 of 10) 12105 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr6-8252 chr6 137812690 137812900 + 7.54 0.000 Intergenic Intergenic -54464 NM_001270508 7128 Hs.211600 NM_006290 ENSG00000118503 TNFAIP3 A20|AISBL|OTUD7C|TNFA1P2 TNF alpha induced protein 3 protein-coding chr14-2897 chr14 36915564 36915774 + 7.54 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) 36722 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr18-3461 chr18 69027693 69027903 + 7.54 0.000 intron (NM_001093729, intron 9 of 9) intron (NM_001093729, intron 9 of 9) 229718 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr19-2353 chr19 50402930 50403140 + 7.54 0.000 intron (NR_046402, intron 8 of 25) intron (NR_046402, intron 8 of 25) 4183 NM_001308632 5424 Hs.279413 NM_002691 ENSG00000062822 POLD1 CDC2|CRCS10|MDPL|POLD DNA polymerase delta 1, catalytic subunit protein-coding chr7-7099 chr7 499160 499370 + 7.54 0.000 intron (NM_033023, intron 5 of 5) intron (NM_033023, intron 5 of 5) 20579 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr10-7580 chr10 18364993 18365203 + 7.54 0.000 intron (NM_201590, intron 1 of 12) MIR3|SINE|MIR 24389 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr11-6135 chr11 40746200 40746410 + 7.54 0.000 intron (NM_020929, intron 1 of 4) L1MA4A|LINE|L1 -453175 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr6-4798 chr6 78223994 78224204 + 7.54 0.000 Intergenic L1MEg|LINE|L1 315210 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr13-2531 chr13 61208867 61209077 + 7.54 0.000 Intergenic HERVH-int|LTR|ERV1 -9092 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr2-10131 chr2 70697467 70697677 + 7.54 0.000 intron (NM_017482, intron 4 of 12) L1M6|LINE|L1 70143 NM_001185054 119 Hs.66187 NM_001617 ENSG00000075340 ADD2 ADDB adducin 2 protein-coding chr5-5730 chr5 169201683 169201893 + 7.54 0.000 intron (NM_003062, intron 3 of 35) MLT1J1|LTR|ERVL-MaLR 61906 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr12-6137 chr12 681820 682030 + 7.54 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -18480 NM_016533 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chr13-2493 chr13 52052215 52052425 + 7.54 0.000 intron (NM_001365552, intron 22 of 23) MER4A|LTR|ERV1 27629 NM_021645 9724 Hs.512963 NM_021645 ENSG00000253797 UTP14C 2700066J21Rik|KIAA0266|UTP14B UTP14C small subunit processome component protein-coding chr5-8181 chr5 104986346 104986556 + 7.54 0.000 Intergenic L1MA1|LINE|L1 -113023 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr2-14074 chr2 198412282 198412492 + 7.54 0.000 Intergenic Intergenic -37290 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr3-3881 chr3 40701156 40701366 + 7.54 0.000 Intergenic MSTC-int|LTR|ERVL-MaLR 176301 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr13-4232 chr13 95475347 95475557 + 7.54 0.000 intron (NM_182848, intron 1 of 4) intron (NM_182848, intron 1 of 4) 41853 NM_182848 9071 Hs.534377 NM_006984 ENSG00000134873 CLDN10 CPETRL3|HELIX|OSP-L|OSPL claudin 10 protein-coding chr13-1950 chr13 99753237 99753447 + 7.54 0.000 intron (NR_120421, intron 4 of 4) L2a|LINE|L2 -24341 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr9-5004 chr9 23306932 23307142 + 7.54 0.000 Intergenic Intergenic 365362 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr13-2222 chr13 24361546 24361756 + 7.54 0.000 Intergenic Intergenic 30201 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr3-5659 chr3 12307795 12308005 + 7.54 0.000 intron (NM_001354667, intron 1 of 6) L2|LINE|L2 -4480 NM_001330615 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr19-6437 chr19 15889375 15889585 + 7.54 0.000 exon (NM_001082, exon 7 of 13) exon (NM_001082, exon 7 of 13) 8594 NM_001082 8529 Hs.558423 NM_001082 ENSG00000186115 CYP4F2 CPF2 cytochrome P450 family 4 subfamily F member 2 protein-coding chr17-7231 chr17 1279201 1279411 + 7.54 0.000 promoter-TSS (NM_172367) promoter-TSS (NM_172367) -356 NM_172367 286753 Hs.146059 NM_172367 ENSG00000184811 TRARG1 BEC-1|DSPB1|IFITMD3|LOST1|TUSC5 trafficking regulator of GLUT4 (SLC2A4) 1 protein-coding chr17-5469 chr17 40373405 40373615 + 7.54 0.000 Intergenic L1ME2|LINE|L1 -8773 NM_152219 125111 Hs.444663 NM_152219 ENSG00000183153 GJD3 CX31.9|Cx30.2|GJA11|GJC1 gap junction protein delta 3 protein-coding chr22-2966 chr22 50070659 50070869 + 7.54 0.000 intron (NM_015166, intron 8 of 11) intron (NM_015166, intron 8 of 11) -12537 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr2-6660 chr2 10011347 10011557 + 7.54 0.000 Intergenic CpG 31949 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr4-7979 chr4 113678690 113678900 + 7.54 0.000 intron (NM_001321581, intron 2 of 19) intron (NM_001321581, intron 2 of 19) 82943 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr1-13709 chr1 14976321 14976531 + 7.54 0.000 intron (NM_001370231, intron 3 of 8) intron (NM_001370231, intron 3 of 8) 30507 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr4-8495 chr4 159961307 159961517 + 7.54 0.000 Intergenic L1MA5|LINE|L1 -183628 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr17-3583 chr17 80910060 80910270 + 7.54 0.000 intron (NM_020761, intron 21 of 33) L1MEc|LINE|L1 61048 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr5-3623 chr5 135061776 135061986 + 7.54 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -21834 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr7-8885 chr7 91869724 91869934 + 7.54 0.000 Intergenic Intergenic 10873 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr3-5261 chr3 111237509 111237719 + 7.54 0.000 Intergenic MIRb|SINE|MIR 165798 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr8-7068 chr8 116486958 116487168 + 7.54 0.000 Intergenic MamRTE1|LINE|RTE-BovB -162004 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr13-3642 chr13 31424995 31425205 + 7.54 0.000 Intergenic Intergenic 225125 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr2-9025 chr2 197443166 197443376 + 7.54 0.000 Intergenic MER20B|DNA|hAT-Charlie -8178 NM_001005526 23451 Hs.632554 NM_012433 ENSG00000115524 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b subunit 1 protein-coding chr10-3098 chr10 21330119 21330329 + 7.54 0.000 Intergenic AluJr|SINE|Alu 42726 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr10-8274 chr10 76336182 76336392 + 7.54 0.000 intron (NM_001305581, intron 6 of 6) intron (NM_001305581, intron 6 of 6) -551757 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr17-3906 chr17 52343294 52343504 + 7.54 0.000 Intergenic L1PA7|LINE|L1 -47123 NR_146898 105371830 NR_146898 ENSG00000263317 LINC01982 - long intergenic non-protein coding RNA 1982 ncRNA chr2-10896 chr2 69645379 69645589 + 7.54 0.000 intron (NM_001320698, intron 1 of 14) intron (NM_001320698, intron 1 of 14) 1676 NM_001320698 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr1-11097 chr1 229379780 229379990 + 7.54 0.000 Intergenic Intergenic -36838 NM_145257 126731 Hs.585011 NM_145257 ENSG00000154429 CCSAP C1orf96|CSAP centriole, cilia and spindle associated protein protein-coding chr8-5889 chr8 16064109 16064319 + 7.54 0.000 Intergenic Intergenic 122058 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr20-2855 chr20 62380811 62381021 + 7.54 0.000 Intergenic Intergenic -6187 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr18-2024 chr18 44803340 44803550 + 7.54 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 122557 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr16-4415 chr16 51110398 51110608 + 7.54 0.000 intron (NR_039672, intron 2 of 6) intron (NR_039672, intron 2 of 6) 40094 NM_001127892 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr21-1321 chr21 9907841 9908051 + 7.54 0.000 Intergenic Intergenic -86885 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr6-6831 chr6 7303827 7304037 + 7.54 0.000 intron (NR_120448, intron 2 of 6) AluSx|SINE|Alu 9267 NM_003144 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr2-9969 chr2 9950694 9950904 + 7.54 0.000 promoter-TSS (NM_198182) promoter-TSS (NM_198182) -894 NM_198182 29841 Hs.418493 NM_198182 ENSG00000134317 GRHL1 LBP32|MGR|NH32|TFCP2L2 grainyhead like transcription factor 1 protein-coding chr1-16262 chr1 212062872 212063082 + 7.54 0.000 intron (NM_001286229, intron 5 of 12) intron (NM_001286229, intron 5 of 12) -10926 NR_026911 100131205 Hs.126774 NR_026911 ENSG00000220749 RPL21P28 RPL21_8_160 ribosomal protein L21 pseudogene 28 pseudo chr3-10386 chr3 128998821 128999031 + 7.54 0.000 intron (NM_001348521, intron 1 of 15) L1ME1|LINE|L1 2379 NM_001348522 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr16-6471 chr16 57541927 57542137 + 7.54 0.000 promoter-TSS (NM_001318481) promoter-TSS (NM_001318481) -611 NM_153837 221188 Hs.187884 NM_153837 ENSG00000159618 ADGRG5 GPR114|PGR27 adhesion G protein-coupled receptor G5 protein-coding chr17-2899 chr17 41496784 41496994 + 7.54 0.000 Intergenic Intergenic -7025 NM_003771 8689 Hs.248189 NM_003771 ENSG00000126337 KRT36 HA6|KRTHA6|hHa6 keratin 36 protein-coding chr5-7374 chr5 20124595 20124805 + 7.54 0.000 intron (NM_001291956, intron 2 of 14) L2a|LINE|L2 -136500 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr7-6234 chr7 132501722 132501932 + 7.54 0.000 intron (NM_181775, intron 3 of 4) intron (NM_181775, intron 3 of 4) 74643 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr19-4725 chr19 19346472 19346682 + 7.54 0.000 intron (NM_015329, intron 12 of 18) intron (NM_015329, intron 12 of 18) 25748 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chrX-4527 chrX 67545034 67545244 + 7.54 0.000 5' UTR (NM_001348061, exon 1 of 4) 5' UTR (NM_001348061, exon 1 of 4) 516 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr18-2036 chr18 45845509 45845719 + 7.54 0.000 Intergenic Intergenic 19939 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr12-7317 chr12 54291276 54291486 + 7.54 0.000 TTS (NM_006163) TTS (NM_006163) 4398 NM_006163 4778 Hs.75643 NM_006163 ENSG00000123405 NFE2 NF-E2|p45 nuclear factor, erythroid 2 protein-coding chr4-7826 chr4 100537435 100537645 + 7.54 0.000 Intergenic L1MA1|LINE|L1 -19518 NM_016242 51705 Hs.152913 NM_016242 ENSG00000164035 EMCN EMCN2|MUC14 endomucin protein-coding chr3-8670 chr3 180571624 180571834 + 7.54 0.000 Intergenic Intergenic -30434 NM_001288582 151613 Hs.43213 NM_133462 ENSG00000163728 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding chr12-4677 chr12 47828061 47828271 + 7.54 0.000 Intergenic AluSx1|SINE|Alu -8263 NM_001098416 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr4-1694 chr4 156970771 156970981 + 7.54 0.000 non-coding (NR_036641, exon 1 of 7) non-coding (NR_036641, exon 1 of 7) 923 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chrX-2633 chrX 110154470 110154680 + 7.54 0.000 intron (NM_001353850, intron 5 of 7) AluSz6|SINE|Alu 70485 NR_004379 692226 NR_004379 ENSG00000208883 SNORD96B U96b small nucleolar RNA, C/D box 96B snoRNA chr2-7960 chr2 63198823 63199033 + 7.54 0.000 intron (NR_148705, intron 13 of 16) MSTA-int|LTR|ERVL-MaLR -79386 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr15-1912 chr15 78541470 78541680 + 7.54 0.000 intron (NM_001330676, intron 1 of 8) intron (NM_001330676, intron 1 of 8) 889 NM_001330676 5685 Hs.251531 NM_002789 ENSG00000041357 PSMA4 HC9|HsT17706|PSC9 proteasome subunit alpha 4 protein-coding chr12-7470 chr12 64551793 64552003 + 7.54 0.000 Intergenic Intergenic -58597 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr9-4526 chr9 72897989 72898199 + 7.54 0.000 Intergenic Intergenic -23985 NR_121181 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr1-10686 chr1 186980471 186980681 + 7.54 0.000 intron (NM_024420, intron 17 of 17) intron (NM_024420, intron 17 of 17) -112266 NR_126347 104169671 NR_126347 ENSG00000230426 LINC01036 - long intergenic non-protein coding RNA 1036 ncRNA chr16-1731 chr16 67029640 67029850 + 7.54 0.000 exon (NM_001368710, exon 2 of 5) exon (NM_001368710, exon 2 of 5) 596 NM_001368710 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding chr13-3763 chr13 43510953 43511163 + 7.54 0.000 intron (NM_001347965, intron 1 of 15) intron (NM_001347965, intron 1 of 15) 62206 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr11-6513 chr11 68898645 68898855 + 7.54 0.000 intron (NM_181514, intron 2 of 6) intron (NM_181514, intron 2 of 6) 5082 NM_181514 219927 Hs.503047 NM_181512 ENSG00000197345 MRPL21 L21mt|MRP-L21 mitochondrial ribosomal protein L21 protein-coding chr9-6525 chr9 110123754 110123964 + 7.54 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) -1642 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr2-5375 chr2 98385055 98385265 + 7.54 0.000 intron (NM_001298, intron 5 of 7) intron (NM_001298, intron 5 of 7) 38704 NM_001079878 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr19-3671 chr19 10093447 10093657 + 7.54 0.000 TTS (NM_018381) TTS (NM_018381) 7235 NM_018381 55337 Hs.655613 NM_018381 ENSG00000130813 SHFL C19orf66|IRAV|RyDEN|SFL shiftless antiviral inhibitor of ribosomal frameshifting protein-coding chr5-7696 chr5 56659011 56659221 + 7.54 0.000 Intergenic Intergenic -52860 NR_161255 101928448 Hs.208052 NM_001287053 ENSG00000225940 C5orf67 - chromosome 5 open reading frame 67 ncRNA chr2-6706 chr2 26526530 26526740 + 7.54 0.000 intron (NM_194248, intron 3 of 46) intron (NM_194248, intron 3 of 46) 32121 NM_001287489 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr3-5156 chr3 58660066 58660276 + 7.54 0.000 intron (NM_138805, intron 1 of 9) A-rich|Low_complexity|Low_complexity 6603 NM_138805 131177 Hs.61265 NM_138805 ENSG00000198643 FAM3D EF7|OIT1 family with sequence similarity 3 member D protein-coding chr3-10686 chr3 150890217 150890427 + 7.54 0.000 exon (NM_001351281, exon 7 of 12) exon (NM_001351281, exon 7 of 12) 15117 NM_001351281 646951 Hs.380222 NM_001351281 MINDY4B C3orf76|FAM188B2 MINDY family member 4B protein-coding chrX-1823 chrX 100751020 100751230 + 7.54 0.000 Intergenic ERVL-E-int|LTR|ERVL -19004 NM_001370162 94121 Hs.592224 NM_080737 ENSG00000102362 SYTL4 SLP4 synaptotagmin like 4 protein-coding chr4-7567 chr4 78811028 78811238 + 7.54 0.000 intron (NM_017593, intron 1 of 13) intron (NM_017593, intron 1 of 13) 34755 NM_198892 55589 Hs.146551 NM_017593 ENSG00000138756 BMP2K BIKE|HRIHFB2017 BMP2 inducible kinase protein-coding chr2-5343 chr2 88408106 88408316 + 7.54 0.000 Intergenic Intergenic 44482 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr2-13952 chr2 186110477 186110687 + 7.54 0.000 Intergenic L1MA7|LINE|L1 -24265 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr13-1756 chr13 110887159 110887369 + 7.54 0.000 intron (NR_104587, intron 5 of 6) intron (NR_104587, intron 5 of 6) -16956 NR_027701 283487 Hs.245390 NM_178514 ENSG00000255874 LINC00346 C13orf29|NCRNA00346 long intergenic non-protein coding RNA 346 ncRNA chr5-4853 chr5 63952479 63952689 + 7.54 0.000 Intergenic MER1B|DNA|hAT-Charlie 9708 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr18-2960 chr18 22171413 22171623 + 7.54 0.000 exon (NM_005257, exon 2 of 7) exon (NM_005257, exon 2 of 7) 2081 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr9-3555 chr9 43121862 43122072 + 7.54 0.000 Intergenic Intergenic -4199 NR_160669 102724904 NR_160669 LOC102724904 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like pseudogene pseudo chr11-7064 chr11 120669737 120669947 + 7.54 0.000 intron (NM_001282470, intron 2 of 19) L2a|LINE|L2 105406 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr4-7934 chr4 108777529 108777739 + 7.54 0.000 Intergenic LTR8B|LTR|ERV1 -14581 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr7-9591 chr7 148068709 148068919 + 7.54 0.000 intron (NM_014141, intron 14 of 22) L1MEc|LINE|L1 397135 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr14-3049 chr14 59634769 59634979 + 7.54 0.000 intron (NM_021136, intron 3 of 8) L2c|LINE|L2 -4060 NM_206852 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr7-5906 chr7 96658631 96658841 + 7.54 0.000 intron (NR_163952, intron 2 of 6) intron (NR_163952, intron 2 of 6) 5602 NR_038948 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr9-5025 chr9 27338106 27338316 + 7.54 0.000 intron (NM_024761, intron 3 of 3) intron (NM_024761, intron 3 of 3) -41061 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chr11-3864 chr11 76683365 76683575 + 7.54 0.000 intron (NR_024042, intron 19 of 20) THE1D|LTR|ERVL-MaLR -12723 NM_001370187 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr6-7253 chr6 42112915 42113125 + 7.54 0.000 intron (NM_001164446, intron 2 of 4) intron (NM_001164446, intron 2 of 4) 29600 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr9-1552 chr9 136911106 136911316 + 7.54 0.000 intron (NM_021138, intron 6 of 10) intron (NM_021138, intron 6 of 10) 24478 NR_039697 100616480 NR_039697 ENSG00000266507 MIR4479 - microRNA 4479 ncRNA chr3-7640 chr3 28376536 28376746 + 7.54 0.000 intron (NM_001324170, intron 1 of 6) L1PB3|LINE|L1 27492 NM_001324169 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding chr15-3125 chr15 65773315 65773525 + 7.54 0.000 intron (NM_005848, intron 1 of 31) L2c|LINE|L2 18873 NM_005848 10260 Hs.654567 NM_005848 ENSG00000174485 DENND4A IRLB|MYCPBP DENN domain containing 4A protein-coding chrX-2506 chrX 94473445 94473655 + 7.54 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 589676 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr2-12147 chr2 38098110 38098320 + 7.54 0.000 Intergenic Intergenic -22034 NM_000104 1545 Hs.154654 NM_000104 ENSG00000138061 CYP1B1 ASGD6|CP1B|CYPIB1|GLC3A|P4501B1 cytochrome P450 family 1 subfamily B member 1 protein-coding chr18-2792 chr18 3225626 3225836 + 7.54 0.000 Intergenic Intergenic -5623 NM_003803 8736 Hs.464469 NM_003803 ENSG00000101605 MYOM1 SKELEMIN myomesin 1 protein-coding chr11-9940 chr11 76278144 76278354 + 7.54 0.000 Intergenic Intergenic -71747 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr19-6868 chr19 44662444 44662654 + 7.54 0.000 3' UTR (NM_006505, exon 8 of 8) 3' UTR (NM_006505, exon 8 of 8) -8817 NR_039756 100616355 NR_039756 ENSG00000283673 MIR4531 - microRNA 4531 ncRNA chr4-8062 chr4 121898497 121898707 + 7.54 0.000 intron (NM_001366479, intron 9 of 10) L1MA5A|LINE|L1 -28105 NM_018190 55212 Hs.591694 NM_018190 ENSG00000138686 BBS7 BBS2L1 Bardet-Biedl syndrome 7 protein-coding chr4-8076 chr4 122861725 122861935 + 7.54 0.000 intron (NM_001361665, intron 1 of 2) L2c|LINE|L2 34999 NM_001361665 2247 Hs.284244 NM_002006 ENSG00000138685 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 protein-coding chr14-3974 chr14 30861802 30862012 + 7.54 0.000 Intergenic Intergenic -12628 NM_001347720 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr4-4082 chr4 4112500 4112710 + 7.54 0.000 Intergenic L2c|LINE|L2 114289 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr20-3322 chr20 19254490 19254700 + 7.54 0.000 intron (NR_024564, intron 6 of 7) intron (NR_024564, intron 6 of 7) 30001 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chrX-2784 chrX 131609784 131609994 + 7.54 0.000 Intergenic MIR3|SINE|MIR 65815 NM_001004486 347468 Hs.553711 NM_001004486 ENSG00000171054 OR13H1 ORX1 olfactory receptor family 13 subfamily H member 1 protein-coding chr1-10047 chr1 90322344 90322554 + 7.54 0.000 Intergenic L2c|LINE|L2 327339 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr5-5837 chr5 179137119 179137329 + 7.54 0.000 intron (NM_014244, intron 12 of 21) intron (NM_014244, intron 12 of 21) 76851 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr5-4970 chr5 79046242 79046452 + 7.54 0.000 intron (NR_104002, intron 2 of 11) AluSx1|SINE|Alu 23327 NR_104002 29958 Hs.655653 NM_013391 ENSG00000132837 DMGDH DMGDHD|ME2GLYDH dimethylglycine dehydrogenase protein-coding chr8-4533 chr8 123339038 123339248 + 7.54 0.000 intron (NM_014109, intron 20 of 27) L2|LINE|L2 -8891 NR_037516 100500863 NR_037516 ENSG00000207704 MIR548AA1 - microRNA 548aa-1 ncRNA chr8-6417 chr8 58080913 58081123 + 7.54 0.000 intron (NM_147189, intron 4 of 4) intron (NM_147189, intron 4 of 4) 86495 NM_147189 90362 Hs.154652 NM_147189 ENSG00000169122 FAM110B C8orf72 family with sequence similarity 110 member B protein-coding chr10-6679 chr10 110324331 110324541 + 7.54 0.000 Intergenic AluSp|SINE|Alu -19516 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr6-3424 chr6 113538872 113539082 + 7.54 0.000 Intergenic Intergenic -105530 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr13-3529 chr13 23214023 23214233 + 7.54 0.000 intron (NM_000231, intron 2 of 7) LOR1b|LTR|ERV1 33207 NM_000231 6445 Hs.37167 NM_000231 ENSG00000102683 SGCG 35DAG|A4|DAGA4|DMDA|DMDA1|LGMD2C|LGMDR5|MAM|SCARMD2|SCG3|gamma-SG sarcoglycan gamma protein-coding chr1-13543 chr1 6779605 6779815 + 7.54 0.000 Intergenic AluSz6|SINE|Alu 5270 NR_149049 110841581 NR_149049 CAMTA1-DT lncCAMTA1 CAMTA1 divergent transcript ncRNA chr9-4409 chr9 138020618 138020828 + 7.54 0.000 intron (NM_001243812, intron 18 of 45) intron (NM_001243812, intron 18 of 45) 24348 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chr5-3031 chr5 15134863 15135073 + 7.54 0.000 Intergenic Intergenic 131592 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr14-3931 chr14 104010944 104011154 + 7.54 0.000 intron (NM_153046, intron 20 of 35) Tigger3b|DNA|TcMar-Tigger -68520 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chrX-2730 chrX 124637377 124637587 + 7.54 0.000 intron (NM_014253, intron 11 of 30) intron (NM_014253, intron 11 of 30) 291200 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr10-9117 chr10 127035506 127035716 + 7.54 0.000 intron (NM_001290223, intron 18 of 51) intron (NM_001290223, intron 18 of 51) 130202 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr5-6107 chr5 23638194 23638404 + 7.54 0.000 Intergenic AluSq2|SINE|Alu 130644 NM_001310214 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding chr14-3281 chr14 82046240 82046450 + 7.54 0.000 Intergenic Intergenic -303207 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA chr1-12253 chr1 221961030 221961240 + 7.54 0.000 intron (NR_149057, intron 1 of 3) AluSx4|SINE|Alu -5275 NR_149071 110806276 NR_149071 LINC02474 - long intergenic non-protein coding RNA 2474 ncRNA chr9-3575 chr9 74216229 74216439 + 7.54 0.000 Intergenic L1MA2|LINE|L1 -155197 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr1-10476 chr1 162710934 162711144 + 7.54 0.000 intron (NM_001014796, intron 3 of 18) intron (NM_001014796, intron 3 of 18) 78575 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr17-8423 chr17 76120277 76120487 + 7.54 0.000 Intergenic Intergenic -16595 NM_015219 23265 Hs.514496 NM_015219 ENSG00000182473 EXOC7 2-5-3p|BLOM4|EX070|EXO70|EXOC1|Exo70p|YJL085W exocyst complex component 7 protein-coding chr12-6783 chr12 9202297 9202507 + 7.54 0.000 intron (NM_002864, intron 3 of 35) intron (NM_002864, intron 3 of 35) 5993 NM_002864 5858 Hs.707491 NM_002864 ENSG00000126838 PZP CPAMD6 PZP alpha-2-macroglobulin like protein-coding chr11-6345 chr11 63397359 63397569 + 7.54 0.000 intron (NM_080866, intron 6 of 9) L1M1|LINE|L1 27679 NM_080866 114571 Hs.502772 NM_080866 ENSG00000149742 SLC22A9 HOAT4|OAT4|OAT7|UST3H|ust3 solute carrier family 22 member 9 protein-coding chr14-2788 chr14 20742940 20743150 + 7.54 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -2842 NM_006683 10876 Hs.304757 NM_006683 ENSG00000181562 EDDM3A EP3A|FAM12A|HE3-ALPHA|HE3A|HE3ALPHA|RAM1 epididymal protein 3A protein-coding chr8-6300 chr8 43000059 43000269 + 7.54 0.000 intron (NM_032410, intron 16 of 21) intron (NM_032410, intron 16 of 21) -56135 NR_033698 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding KI270442.1-5 KI270442.1 22308 22518 + 7.54 0.000 NA NA NA NA chr5-7134 chr5 1216692 1216902 + 7.54 0.000 exon (NM_001003841, exon 8 of 12) exon (NM_001003841, exon 8 of 12) -8584 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding chr4-5613 chr4 2604880 2605090 + 7.54 0.000 intron (NM_001366316, intron 2 of 20) AluJr|SINE|Alu -20447 NM_001256668 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr8-6825 chr8 97444435 97444645 + 7.54 0.000 intron (NR_125390, intron 1 of 2) intron (NR_125390, intron 1 of 2) 1957 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr6-6863 chr6 10151331 10151541 + 7.54 0.000 Intergenic Intergenic -253066 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr14-3651 chr14 77980050 77980260 + 7.54 0.000 Intergenic Intergenic 180046 NM_001366488 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr6-7493 chr6 62921649 62921859 + 7.54 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 398223 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr10-3237 chr10 111739382 111739592 + 7.54 0.000 Intergenic Intergenic 444278 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr13-2853 chr13 110197014 110197224 + 7.54 0.000 intron (NM_001845, intron 21 of 51) L2a|LINE|L2 75417 NR_148221 105370361 Hs.134728 NR_148221 LOC105370361 - uncharacterized LOC105370361 ncRNA chr5-6239 chr5 87161055 87161265 + 7.54 0.000 intron (NR_105018, intron 2 of 3) intron (NR_105018, intron 2 of 3) 41012 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr7-2386 chr7 43880704 43880914 + 7.54 0.000 intron (NM_001077663, intron 5 of 5) intron (NM_001077663, intron 5 of 5) -11292 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chrX-2433 chrX 78692648 78692858 + 7.54 0.000 Intergenic Intergenic -33425 NM_152694 203430 Hs.134873 NM_152694 ENSG00000179300 RTL3 Mar3|Mart3|SIRH9|ZCCHC5|ZHC5 retrotransposon Gag like 3 protein-coding chr17-7458 chr17 14447261 14447471 + 7.54 0.000 Intergenic Intergenic 143626 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr9-8136 chr9 101602307 101602517 + 7.54 0.000 intron (NM_133445, intron 6 of 8) intron (NM_133445, intron 6 of 8) -7443 NM_147180 5535 Hs.151167 NM_147180 ENSG00000188386 PPP3R2 PPP3RL protein phosphatase 3 regulatory subunit B, beta protein-coding chrX-3594 chrX 80128309 80128519 + 7.54 0.000 Intergenic L1PB2|LINE|L1 105354 NM_001303475 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr6-4216 chr6 4320875 4321085 + 7.54 0.000 Intergenic Intergenic -130951 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr3-6973 chr3 166801380 166801590 + 7.54 0.000 Intergenic AluY|SINE|Alu -97198 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr2-5449 chr2 122643618 122643828 + 7.54 0.000 Intergenic Intergenic 429758 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr5-8197 chr5 106702365 106702575 + 7.54 0.000 Intergenic AluY|SINE|Alu 308544 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr11-5483 chr11 78034782 78034992 + 7.54 0.000 intron (NM_001203261, intron 2 of 2) intron (NM_001203261, intron 2 of 2) 11304 NM_001282406 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr1-15768 chr1 174412209 174412419 + 7.54 0.000 intron (NM_001366446, intron 13 of 25) L1PA16|LINE|L1 -35650 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr4-3057 chr4 140947512 140947722 + 7.54 0.000 intron (NM_020724, intron 4 of 6) intron (NM_020724, intron 4 of 6) 185852 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr2-6668 chr2 12671826 12672036 + 7.54 0.000 Intergenic Intergenic -44941 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr7-4478 chr7 137470994 137471204 + 7.54 0.000 intron (NM_001321710, intron 24 of 32) intron (NM_001321710, intron 24 of 32) -127366 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr3-10760 chr3 156659225 156659435 + 7.54 0.000 Intergenic L2b|LINE|L2 -15260 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr6-4024 chr6 125363340 125363550 + 7.54 0.000 Intergenic CpG -61478 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chrX-3249 chrX 77663182 77663392 + 7.54 0.000 intron (NM_000489, intron 12 of 34) AluJb|SINE|Alu 122929 NM_000489 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr2-13219 chr2 122897505 122897715 + 7.54 0.000 Intergenic Intergenic 175871 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr5-8400 chr5 126455829 126456039 + 7.54 0.000 intron (NR_146196, intron 1 of 14) intron (NR_146196, intron 1 of 14) -9216 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr1-14771 chr1 68861129 68861339 + 7.54 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -194664 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr4-4898 chr4 121574849 121575059 + 7.54 0.000 Intergenic L2|LINE|L2 122026 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr4-1229 chr4 762007 762217 + 7.54 0.000 intron (NM_001317836, intron 10 of 11) intron (NM_001317836, intron 10 of 11) 19736 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr7-8323 chr7 41984957 41985167 + 7.54 0.000 intron (NM_000168, intron 10 of 14) intron (NM_000168, intron 10 of 14) 252147 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr5-6837 chr5 114032191 114032401 + 7.54 0.000 Intergenic Intergenic -329774 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr7-4442 chr7 124960486 124960696 + 7.54 0.000 intron (NR_125719, intron 2 of 7) LTR8A|LTR|ERV1 -30608 NR_003103 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr1-7233 chr1 224988692 224988902 + 7.54 0.000 intron (NM_001349911, intron 8 of 10) AluJr|SINE|Alu 59122 NM_001367481 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr19-4156 chr19 37136883 37137093 + 7.54 0.000 Intergenic Intergenic 35448 NM_199126 199704 Hs.659236 NM_152655 ENSG00000196967 ZNF585A - zinc finger protein 585A protein-coding chr8-5843 chr8 6304700 6304910 + 7.54 0.000 Intergenic MER31A|LTR|ERV1 101743 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr2-13984 chr2 190040171 190040381 + 7.54 0.000 Intergenic L1PA14|LINE|L1 22453 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr1-10923 chr1 209694378 209694588 + 7.54 0.000 intron (NM_181755, intron 1 of 6) L2b|LINE|L2 8303 NM_001206741 3290 Hs.195040 NM_005525 ENSG00000117594 HSD11B1 11-DH|11-beta-HSD1|CORTRD2|HDL|HSD11|HSD11B|HSD11L|SDR26C1 hydroxysteroid 11-beta dehydrogenase 1 protein-coding chr8-5859 chr8 13446187 13446397 + 7.54 0.000 intron (NM_024767, intron 2 of 4) intron (NM_024767, intron 2 of 4) 68559 NM_182643 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr6-7826 chr6 102529444 102529654 + 7.54 0.000 Intergenic L2|LINE|L2 1130564 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr5-6421 chr5 153010904 153011114 + 7.54 0.000 Intergenic Intergenic -38660 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr22-3046 chr22 37101996 37102206 + 7.54 0.000 intron (NM_153609, intron 2 of 17) MamTip2|DNA|hAT-Tip100 1552 NM_153609 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr20-3679 chr20 13006757 13006967 + 7.54 0.000 Intergenic Intergenic -2110 NM_001349945 55304 Hs.425023 NM_018327 ENSG00000172296 SPTLC3 C20orf38|LCB 3|LCB2B|LCB3|SPT 3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b serine palmitoyltransferase long chain base subunit 3 protein-coding chr4-7543 chr4 77011136 77011346 + 7.54 0.000 intron (NM_001306147, intron 5 of 11) MER117|DNA|hAT-Charlie 61489 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr14-2966 chr14 50351170 50351380 + 7.54 0.000 intron (NM_001282236, intron 3 of 8) HAL1|LINE|L1 38951 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr4-1893 chr4 10456744 10456954 + 7.54 0.000 intron (NM_053042, intron 1 of 2) CpG 577 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr5-5097 chr5 99033602 99033812 + 7.54 0.000 Intergenic Intergenic -103993 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr2-7393 chr2 7948879 7949089 + 7.54 0.000 intron (NR_015405, intron 2 of 2) MIRc|SINE|MIR 27830 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr5-7849 chr5 71965421 71965631 + 7.54 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -141949 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr5-7516 chr5 36392324 36392534 + 7.54 0.000 Intergenic LTR33|LTR|ERVL -90527 NM_001323273 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr12-3931 chr12 132744552 132744762 + 7.54 0.000 intron (NM_015114, intron 5 of 12) MER58A|DNA|hAT-Charlie 17175 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr21-1573 chr21 14520669 14520879 + 7.54 0.000 intron (NM_022136, intron 2 of 7) MER61B|LTR|ERV1 25541 NM_022136 64092 Hs.473341 NM_022136 ENSG00000155307 SAMSN1 HACS1|NASH1|SASH2|SH3D6B|SLy2 SAM domain, SH3 domain and nuclear localization signals 1 protein-coding chr17-4215 chr17 34896318 34896528 + 7.54 0.000 Intergenic Intergenic 65037 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr3-9821 chr3 74590994 74591204 + 7.54 0.000 Intergenic MER20B|DNA|hAT-Charlie -69959 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr8-5244 chr8 127910819 127911029 + 7.54 0.000 intron (NR_003367, intron 2 of 8) (AG)n|Simple_repeat|Simple_repeat 37799 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chrX-2191 chrX 40169618 40169828 + 7.54 0.000 intron (NM_001123384, intron 1 of 13) CpG 7554 NM_001123384 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr1-7011 chr1 169572824 169573034 + 7.54 0.000 intron (NM_000130, intron 2 of 24) L2|LINE|L2 13602 NM_000130 2153 Hs.30054 NM_000130 ENSG00000198734 F5 FVL|PCCF|RPRGL1|THPH2 coagulation factor V protein-coding chr10-6922 chr10 49837767 49837977 + 7.54 0.000 intron (NM_001303486, intron 15 of 17) intron (NM_001303486, intron 15 of 17) -75493 NM_001347823 55753 Hs.17860 NM_018245 ENSG00000197444 OGDHL - oxoglutarate dehydrogenase like protein-coding chr6-7702 chr6 87200561 87200771 + 7.54 0.000 intron (NM_015021, intron 1 of 7) intron (NM_015021, intron 1 of 7) 45101 NM_015021 23036 Hs.444800 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding chr5-5641 chr5 156460602 156460812 + 7.54 0.000 intron (NM_001128209, intron 2 of 7) intron (NM_001128209, intron 2 of 7) 133543 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr18-1452 chr18 44654771 44654981 + 7.54 0.000 Intergenic Intergenic -25197 NM_001130110 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr2-8676 chr2 149744150 149744360 + 7.54 0.000 intron (NR_110240, intron 2 of 2) intron (NR_110240, intron 2 of 2) 114936 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr2-5337 chr2 85916003 85916213 + 7.54 0.000 Intergenic MIR|SINE|MIR 26828 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr10-4944 chr10 26714478 26714688 + 7.54 0.000 intron (NM_001321978, intron 5 of 9) intron (NM_001321978, intron 5 of 9) 16882 NM_014317 23590 Hs.558468 NM_014317 ENSG00000148459 PDSS1 COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 decaprenyl diphosphate synthase subunit 1 protein-coding chr4-3202 chr4 21135158 21135368 + 7.54 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) -151254 NM_001363504 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr15-1639 chr15 91970259 91970469 + 7.54 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 116060 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr10-5924 chr10 119971022 119971232 + 7.54 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 12614 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr7-9525 chr7 139624431 139624641 + 7.54 0.000 intron (NM_001113239, intron 6 of 14) L2c|LINE|L2 100851 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr3-4805 chr3 128933778 128933988 + 7.54 0.000 intron (NM_001348520, intron 10 of 14) intron (NM_001348520, intron 10 of 14) 54263 NM_014049 28976 Hs.567482 NM_014049 ENSG00000177646 ACAD9 MC1DN20|NPD002 acyl-CoA dehydrogenase family member 9 protein-coding chr16-5612 chr16 57515321 57515531 + 7.54 0.000 exon (NM_033212, exon 8 of 9) exon (NM_033212, exon 8 of 9) 21145 NM_033212 92922 Hs.644611 NM_033212 ENSG00000135736 CCDC102A - coiled-coil domain containing 102A protein-coding chr12-6709 chr12 4860845 4861055 + 7.54 0.000 Intergenic Intergenic -48955 NM_000217 3736 Hs.416139 NM_000217 ENSG00000111262 KCNA1 AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1 potassium voltage-gated channel subfamily A member 1 protein-coding chr9-6725 chr9 7888912 7889122 + 7.54 0.000 Intergenic Intergenic -89239 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr17-6559 chr17 42638468 42638678 + 7.54 0.000 Intergenic AluJo|SINE|Alu -20711 NM_001320509 27175 Hs.279669 NM_016437 ENSG00000037042 TUBG2 - tubulin gamma 2 protein-coding chr2-10536 chr2 234575697 234575907 + 7.54 0.000 Intergenic Intergenic -78721 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr2-4819 chr2 57760071 57760281 + 7.54 0.000 Intergenic Intergenic -147475 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr6-5676 chr6 107435913 107436123 + 7.54 0.000 intron (NM_020381, intron 1 of 7) intron (NM_020381, intron 1 of 7) 23546 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr10-8599 chr10 96734839 96735049 + 7.54 0.000 Intergenic HERVH-int|LTR|ERV1 -14430 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr4-5945 chr4 155807112 155807322 + 7.54 0.000 3' UTR (NM_001291955, exon 13 of 13) 3' UTR (NM_001291955, exon 13 of 13) 48196 NM_001291952 2983 Hs.77890 NM_000857 ENSG00000061918 GUCY1B1 GC-S-beta-1|GC-SB3|GUC1B3|GUCB3|GUCSB3|GUCY1B3 guanylate cyclase 1 soluble subunit beta 1 protein-coding chr13-3684 chr13 35557215 35557425 + 7.54 0.000 intron (NM_001204197, intron 4 of 17) L1M6|LINE|L1 80571 NM_001204197 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr1-16285 chr1 214269319 214269529 + 7.54 0.000 Intergenic Charlie18a|DNA|hAT-Charlie -11735 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr17-4759 chr17 43435037 43435247 + 7.54 0.000 Intergenic Intergenic -9565 NR_146952 106660605 NR_146952 ENSG00000267151 MIR2117HG - MIR2117 host gene ncRNA chr2-8846 chr2 173459060 173459270 + 7.54 0.000 Intergenic Intergenic 104293 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr19-3342 chr19 8104032 8104242 + 7.54 0.000 intron (NM_032447, intron 38 of 63) AluJb|SINE|Alu 44732 NM_001321431 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr12-8358 chr12 132037894 132038104 + 7.54 0.000 exon (NM_015409, exon 32 of 53) exon (NM_015409, exon 32 of 53) 6775 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr19-5807 chr19 37898765 37898975 + 7.54 0.000 intron (NM_031951, intron 1 of 5) intron (NM_031951, intron 1 of 5) 7724 NM_031951 83889 Hs.664194 NM_031951 ENSG00000171804 WDR87 NYD-SP11 WD repeat domain 87 protein-coding chr11-10110 chr11 87263949 87264159 + 7.54 0.000 intron (NR_033149, intron 5 of 13) intron (NR_033149, intron 5 of 13) 226120 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr3-7059 chr3 175958049 175958259 + 7.54 0.000 Intergenic L2a|LINE|L2 -181821 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr12-6715 chr12 5193764 5193974 + 7.54 0.000 Intergenic L3b|LINE|CR1 49282 NR_120476 101929584 Hs.436529 NR_120476 ENSG00000256115 LINC02443 - long intergenic non-protein coding RNA 2443 ncRNA chr22-3699 chr22 24624427 24624637 + 7.54 0.000 intron (NM_013430, intron 11 of 15) intron (NM_013430, intron 11 of 15) -8383 NR_024494 644165 Hs.531306 NR_024494 BCRP3 BCR3|BCRL3|BCRL6 BCR pseudogene 3 pseudo chr2-10845 chr2 58582217 58582427 + 7.54 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 61569 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr7-7832 chr7 4234185 4234395 + 7.54 0.000 intron (NM_001079653, intron 15 of 19) intron (NM_001079653, intron 15 of 19) -99453 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr3-4281 chr3 153293346 153293556 + 7.54 0.000 Intergenic Intergenic 131225 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr1-9913 chr1 72805641 72805851 + 7.54 0.000 Intergenic MLT2A2|LTR|ERVL -500424 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chr12-7015 chr12 32499125 32499335 + 7.54 0.000 intron (NM_001304481, intron 1 of 16) intron (NM_001304481, intron 1 of 16) -2813 NM_139241 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr2-8987 chr2 191435418 191435628 + 7.54 0.000 Intergenic Intergenic 190119 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr15-2480 chr15 92652816 92653026 + 7.54 0.000 intron (NM_207446, intron 1 of 2) intron (NM_207446, intron 1 of 2) 2854 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr12-5916 chr12 65668039 65668249 + 7.54 0.000 Intergenic Intergenic -25772 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr1-16688 chr1 245086633 245086843 + 7.54 0.000 intron (NM_001143943, intron 6 of 6) MIR|SINE|MIR -68247 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr9-3273 chr9 33624141 33624351 + 7.54 0.000 promoter-TSS (NR_003573) promoter-TSS (NR_003573) 21 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr1-9027 chr1 11779571 11779781 + 7.54 0.000 promoter-TSS (NR_126000) promoter-TSS (NR_126000) -57 NR_126000 102724659 Hs.737635 NR_126000 ENSG00000177553 LOC102724659 - uncharacterized LOC102724659 ncRNA chr2-13052 chr2 109302799 109303009 + 7.54 0.000 intron (NM_001099289, intron 1 of 9) AluSx|SINE|Alu 10721 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr15-2501 chr15 26949411 26949621 + 7.54 0.000 TTS (NM_000810) TTS (NM_000810) -21665 NM_001270873 2567 Hs.569475 NM_033223 ENSG00000182256 GABRG3 - gamma-aminobutyric acid type A receptor gamma3 subunit protein-coding chr19-2866 chr19 14384456 14384666 + 7.54 0.000 intron (NM_001784, intron 1 of 17) intron (NM_001784, intron 1 of 17) 3117 NM_078481 976 Hs.466039 NM_001784 ENSG00000123146 ADGRE5 CD97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding chr10-6389 chr10 3764115 3764325 + 7.54 0.000 Intergenic Intergenic 20989 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr8-2813 chr8 124728624 124728834 + 7.54 0.000 promoter-TSS (NM_001363302) promoter-TSS (NM_001363302) -222 NM_014751 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr2-5624 chr2 188870197 188870407 + 7.54 0.000 Intergenic Intergenic -80179 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr4-4444 chr4 53011595 53011805 + 7.54 0.000 intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 149383 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr5-8901 chr5 156281279 156281489 + 7.54 0.000 Intergenic Intergenic -45373 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr11-8520 chr11 125348717 125348927 + 7.54 0.000 intron (NM_022062, intron 3 of 12) intron (NM_022062, intron 3 of 12) -146392 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr19-6797 chr19 41446531 41446741 + 7.54 0.000 Intergenic Intergenic 3480 NM_001130514 100170765 Hs.649452 NM_001130514 ENSG00000204978 ERICH4 C19orf69 glutamate rich 4 protein-coding chr3-5899 chr3 39027680 39027890 + 7.54 0.000 intron (NM_001349253, intron 2 of 29) LTR78|LTR|ERV1 24159 NM_001349253 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr9-8709 chr9 131341048 131341258 + 7.54 0.000 Intergenic L1PA6|LINE|L1 51430 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr1-12774 chr1 76835234 76835444 + 7.54 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -32141 NM_001320274 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr5-3580 chr5 78920674 78920884 + 7.54 0.000 intron (NM_198709, intron 5 of 7) L2|LINE|L2 64531 NM_000046 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr22-4098 chr22 43402731 43402941 + 7.54 0.000 intron (NR_146918, intron 2 of 3) MIRb|SINE|MIR 2505 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr2-5145 chr2 26491458 26491668 + 7.54 0.000 intron (NM_194248, intron 9 of 46) L2|LINE|L2 -13439 NM_194322 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr3-4612 chr3 5752940 5753150 + 7.54 0.000 Intergenic Intergenic -502790 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr4-7907 chr4 106864259 106864469 + 7.54 0.000 Intergenic X9_LINE|LINE|L1 171949 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr12-4658 chr12 46255980 46256190 + 7.54 0.000 intron (NM_001278387, intron 1 of 17) AluYm1|SINE|Alu 10431 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr9-3560 chr9 69131856 69132066 + 7.54 0.000 intron (NM_001369871, intron 1 of 24) MER68|LTR|ERVL 8946 NM_001369871 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr13-2821 chr13 103953080 103953290 + 7.54 0.000 Intergenic Intergenic 527985 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr1-4699 chr1 238325296 238325506 + 7.54 0.000 Intergenic Intergenic 160616 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr8-3526 chr8 118937217 118937427 + 7.54 0.000 intron (NM_002546, intron 1 of 4) intron (NM_002546, intron 1 of 4) 14563 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding chr9-5528 chr9 107738163 107738373 + 7.54 0.000 Intergenic Intergenic -248499 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr11-6780 chr11 87399431 87399641 + 7.54 0.000 Intergenic Intergenic 319875 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr20-4232 chr20 48283772 48283982 + 7.54 0.000 Intergenic Intergenic -76034 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr8-6588 chr8 71749509 71749719 + 7.54 0.000 Intergenic Intergenic -93509 NR_033652 100132891 Hs.137674 NR_033651 ENSG00000235531 MSC-AS1 - MSC antisense RNA 1 ncRNA chr4-4607 chr4 77186895 77187105 + 7.54 0.000 Intergenic LTR33|LTR|ERVL 29793 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr14-3757 chr14 48850830 48851040 + 7.54 0.000 Intergenic Intergenic 735445 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr19-5024 chr19 48025577 48025787 + 7.54 0.000 TTS (NM_022142) TTS (NM_022142) 18397 NM_019855 56344 Hs.117694 NM_016367 ENSG00000105507 CABP5 CABP3 calcium binding protein 5 protein-coding chr5-9125 chr5 174759891 174760101 + 7.54 0.000 Intergenic Intergenic 8262 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr16-7028 chr16 88133719 88133929 + 7.54 0.000 Intergenic AluSx1|SINE|Alu -32839 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr12-4863 chr12 60317406 60317616 + 7.54 0.000 Intergenic L2a|LINE|L2 628141 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr4-6114 chr4 18316071 18316281 + 7.54 0.000 Intergenic Intergenic -294301 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr4-6245 chr4 67314979 67315189 + 7.54 0.000 Intergenic Intergenic 106916 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr20-3697 chr20 14992157 14992367 + 7.54 0.000 intron (NM_001351663, intron 5 of 17) intron (NM_001351663, intron 5 of 17) -62744 NR_037841 100379174 Hs.407533 NR_037841 ENSG00000235914 MACROD2-AS1 BA318C17.1|NCRNA00186 MACROD2 antisense RNA 1 ncRNA chr5-2078 chr5 169164486 169164696 + 7.54 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 99103 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr16-6651 chr16 68581663 68581873 + 7.54 0.000 Intergenic Charlie23a|DNA|hAT-Charlie 42477 NM_001305207 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr16-6754 chr16 75220406 75220616 + 7.54 0.000 intron (NM_001329190, intron 1 of 5) AluJr|SINE|Alu 1523 NM_001906 1504 Hs.610926 NM_001906 ENSG00000168925 CTRB1 CTRB chymotrypsinogen B1 protein-coding chr2-14560 chr2 231031608 231031818 + 7.54 0.000 Intergenic MER3|DNA|hAT-Charlie -5810 NM_001144994 257407 Hs.526596 NM_001144994 ENSG00000204128 C2orf72 - chromosome 2 open reading frame 72 protein-coding chr20-1524 chr20 41293315 41293525 + 7.54 0.000 intron (NM_015035, intron 1 of 3) L3|LINE|CR1 6700 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr19-4669 chr19 16993289 16993499 + 7.54 0.000 intron (NM_015692, intron 12 of 41) intron (NM_015692, intron 12 of 41) 33416 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr18-1669 chr18 67136840 67137050 + 7.54 0.000 Intergenic MLT1H-int|LTR|ERVL-MaLR 55361 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr10-6252 chr10 72985455 72985665 + 7.54 0.000 Intergenic FRAM|SINE|Alu -30754 NM_001318125 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chr1-9940 chr1 77605409 77605619 + 7.54 0.000 intron (NM_001308237, intron 4 of 13) L1MA9|LINE|L1 77144 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr12-4843 chr12 57663363 57663573 + 7.54 0.000 Intergenic MER57-int|LTR|ERV1 -30229 NM_001276469 2583 Hs.159481 NM_001478 ENSG00000135454 B4GALNT1 GALGT|GALNACT|GalNAc-T|SPG26 beta-1,4-N-acetyl-galactosaminyltransferase 1 protein-coding chr18-3039 chr18 27849862 27850072 + 7.54 0.000 Intergenic L1PREC2|LINE|L1 186674 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr17-7719 chr17 33001881 33002091 + 7.54 0.000 Intergenic Intergenic 9135 NM_001317225 124912 Hs.434112 NM_173847 ENSG00000141316 SPACA3 ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1 sperm acrosome associated 3 protein-coding chr2-6515 chr2 197460156 197460366 + 7.54 0.000 intron (NM_001320820, intron 2 of 4) AluSg|SINE|Alu 6497 NM_001320820 80219 Hs.606592 NM_025147 ENSG00000115520 COQ10B - coenzyme Q10B protein-coding chr12-4844 chr12 57717916 57718126 + 7.54 0.000 intron (NM_001017956, intron 10 of 13) intron (NM_001017956, intron 10 of 13) -8219 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA chr9-7377 chr9 17648648 17648858 + 7.54 0.000 intron (NM_003026, intron 1 of 8) intron (NM_003026, intron 1 of 8) 69687 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr2-4671 chr2 204521344 204521554 + 7.54 0.000 Intergenic Intergenic -24026 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr12-7619 chr12 79615732 79615942 + 7.54 0.000 intron (NM_001354732, intron 3 of 6) AluJb|SINE|Alu 74743 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr19-5070 chr19 50752709 50752919 + 7.54 0.000 Intergenic Intergenic -17650 NM_001506 2854 Hs.515555 NM_001506 ENSG00000142511 GPR32 RVDR1 G protein-coupled receptor 32 protein-coding chr10-7498 chr10 12180240 12180450 + 7.54 0.000 intron (NM_001321647, intron 3 of 8) intron (NM_001321647, intron 3 of 8) 15546 NM_014142 11164 Hs.555956 NM_014142 ENSG00000165609 NUDT5 YSA1|YSA1H|YSAH1|hNUDT5 nudix hydrolase 5 protein-coding chr10-8758 chr10 104180091 104180301 + 7.54 0.000 intron (NM_025145, intron 17 of 37) L2a|LINE|L2 38687 NR_030340 693194 NR_030340 ENSG00000208033 MIR609 MIRN609|hsa-mir-609 microRNA 609 ncRNA chr3-9061 chr3 25336650 25336860 + 7.54 0.000 intron (NM_001290216, intron 4 of 10) intron (NM_001290216, intron 4 of 10) -4047 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr12-7253 chr12 51988867 51989077 + 7.54 0.000 intron (NM_004302, intron 7 of 8) AluSx|SINE|Alu -17974 NM_181711 160622 Hs.407202 NM_181711 ENSG00000161835 GRASP TAMALIN general receptor for phosphoinositides 1 associated scaffold protein protein-coding chr12-5242 chr12 108779979 108780189 + 7.54 0.000 3' UTR (NM_018984, exon 15 of 15) 3' UTR (NM_018984, exon 15 of 15) 47467 NM_001161331 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr9-4805 chr9 135890268 135890478 + 7.54 0.000 intron (NM_015447, intron 1 of 16) intron (NM_015447, intron 1 of 16) 17173 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr15-2122 chr15 71115444 71115654 + 7.54 0.000 Intergenic CpG -25900 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr1-13472 chr1 3573327 3573537 + 7.54 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) -12642 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr2-5319 chr2 74887914 74888124 + 7.54 0.000 exon (NM_000189, exon 16 of 18) exon (NM_000189, exon 16 of 18) -21112 NR_125792 102724515 Hs.708649 NR_125792 ENSG00000204792 LINC01291 - long intergenic non-protein coding RNA 1291 ncRNA chr13-3491 chr13 20160584 20160794 + 7.54 0.000 intron (NM_021954, intron 1 of 1) intron (NM_021954, intron 1 of 1) 363 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr8-7027 chr8 110765418 110765628 + 7.54 0.000 Intergenic Intergenic 261910 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr7-7185 chr7 8202692 8202902 + 7.54 0.000 intron (NM_001350836, intron 7 of 14) intron (NM_001350836, intron 7 of 14) 59255 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr4-3315 chr4 183075001 183075211 + 7.54 0.000 Intergenic FRAM|SINE|Alu 24093 NR_024008 152641 Hs.745108 NM_153008 ENSG00000251359 WWC2-AS2 C4orf38 WWC2 antisense RNA 2 ncRNA chr9-4417 chr9 5453655 5453865 + 7.54 0.000 intron (NR_052005, intron 1 of 7) intron (NR_052005, intron 1 of 7) 3218 NM_001314029 29126 Hs.521989 NM_014143 ENSG00000120217 CD274 B7-H|B7H1|PD-L1|PDCD1L1|PDCD1LG1|PDL1|hPD-L1 CD274 molecule protein-coding chr19-5685 chr19 10555473 10555683 + 7.54 0.000 intron (NM_023008, intron 16 of 18) MIRb|SINE|MIR 3456 NR_031603 100302226 NR_031603 ENSG00000221410 MIR1238 MIRN1238|hsa-mir-1238 microRNA 1238 ncRNA chr10-5384 chr10 74293500 74293710 + 7.54 0.000 intron (NM_001369124, intron 3 of 9) LTR41B|LTR|ERVL 116842 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr6-4753 chr6 70896043 70896253 + 7.54 0.000 intron (NM_080742, intron 1 of 3) MER68B|LTR|ERVL 60912 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr17-2307 chr17 43685328 43685538 + 7.54 0.000 Intergenic MIRb|SINE|MIR -23511 NM_001040002 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr16-1260 chr16 31010535 31010745 + 7.54 0.000 promoter-TSS (NM_052874) promoter-TSS (NM_052874) -2 NM_052874 112755 Hs.542230 NM_052874 ENSG00000099365 STX1B GEFSP9|STX1B1|STX1B2 syntaxin 1B protein-coding chr15-3021 chr15 57299978 57300188 + 7.54 0.000 promoter-TSS (NR_024433) promoter-TSS (NR_024433) -282 NR_024433 283663 Hs.181297 NR_024433 ENSG00000247982 LINC00926 - long intergenic non-protein coding RNA 926 ncRNA chr17-3205 chr17 2215392 2215602 + 7.54 0.000 intron (NM_001256827, intron 3 of 11) intron (NM_001256827, intron 3 of 11) -17181 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr17-4305 chr17 79571129 79571339 + 7.54 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 39817 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-9388 chr1 31130666 31130876 + 7.54 0.000 Intergenic HAL1|LINE|L1 -65054 NM_001020658 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr15-4297 chr15 38517414 38517624 + 7.54 0.000 intron (NM_001306086, intron 5 of 14) MIR3|SINE|MIR 47295 NM_001306086 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr16-5185 chr16 9805555 9805765 + 7.54 0.000 intron (NM_001134408, intron 10 of 13) MIRb|SINE|MIR -350155 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chrX-2422 chrX 77017028 77017238 + 7.54 0.000 Intergenic Intergenic -2601 NR_110404 101928469 Hs.640805 NR_110400 ENSG00000280870 MIR325HG MIR384HG MIR325 host gene ncRNA chr6-4480 chr6 36340547 36340757 + 7.54 0.000 Intergenic Intergenic -3764 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chrX-3295 chrX 107629567 107629777 + 7.54 0.000 intron (NM_001204402, intron 1 of 3) intron (NM_001204402, intron 1 of 3) 1248 NM_001204402 5631 Hs.56 NM_002764 ENSG00000147224 PRPS1 ARTS|CMTX5|DFN2|DFNX1|PPRibP|PRS-I|PRSI phosphoribosyl pyrophosphate synthetase 1 protein-coding chrX-4707 chrX 87395874 87396084 + 7.54 0.000 Intergenic AluSx1|SINE|Alu -121823 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr19-6402 chr19 13508898 13509108 + 7.54 0.000 Intergenic L1ME3B|LINE|L1 -2524 NM_023035 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr21-1064 chr21 30255651 30255861 + 7.54 0.000 Intergenic MLT2B1|LTR|ERVL 27194 NM_001085455 643803 Hs.580883 NM_001085455 ENSG00000188694 KRTAP24-1 KAP24.1 keratin associated protein 24-1 protein-coding chr10-4629 chr10 122392439 122392649 + 7.54 0.000 intron (NM_001330178, intron 2 of 13) intron (NM_001330178, intron 2 of 13) 241 NM_021622 59338 Hs.643512 NM_021622 ENSG00000107679 PLEKHA1 TAPP1 pleckstrin homology domain containing A1 protein-coding chr4-2431 chr4 143025260 143025470 + 7.54 0.000 Intergenic MADE1|DNA|TcMar-Mariner 159496 NR_136203 105377623 NR_136203 ENSG00000250326 LOC105377623 - uncharacterized LOC105377623 ncRNA chr9-6865 chr9 80318552 80318762 + 7.54 0.000 Intergenic Intergenic 343634 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr11-9908 chr11 75223938 75224148 + 7.54 0.000 Intergenic Intergenic -16731 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr21-1473 chr21 36437873 36438083 + 7.54 0.000 Intergenic L2|LINE|L2 28489 NM_012130 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr12-7912 chr12 108325113 108325323 + 7.54 0.000 intron (NM_001142344, intron 1 of 2) intron (NM_001142344, intron 1 of 2) -4556 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr3-4623 chr3 14505844 14506054 + 7.54 0.000 intron (NM_001080423, intron 19 of 23) intron (NM_001080423, intron 19 of 23) 34393 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chr3-8891 chr3 11546891 11547101 + 7.54 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 21802 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr7-4301 chr7 26193924 26194134 + 7.54 0.000 intron (NM_002137, intron 7 of 10) intron (NM_002137, intron 7 of 10) 6717 NM_031243 3181 Hs.487774 NM_002137 ENSG00000122566 HNRNPA2B1 HNRNPA2|HNRNPB1|HNRPA2|HNRPA2B1|HNRPB1|IBMPFD2|RNPA2|SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding chr10-8393 chr10 83080138 83080348 + 7.54 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 596846 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr1-9518 chr1 38840276 38840486 + 7.54 0.000 intron (NM_022157, intron 6 of 6) intron (NM_022157, intron 6 of 6) 19391 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr7-8751 chr7 77633850 77634060 + 7.54 0.000 intron (NM_001131009, intron 13 of 16) AluSq2|SINE|Alu 62310 NR_134251 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr16-6565 chr16 65802489 65802699 + 7.54 0.000 Intergenic Intergenic -226294 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr15-4091 chr15 73287684 73287894 + 7.54 0.000 intron (NM_002499, intron 23 of 28) AluSq2|SINE|Alu -12121 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr1-8905 chr1 6270713 6270923 + 7.54 0.000 intron (NM_181866, intron 8 of 8) intron (NM_181866, intron 8 of 8) -9720 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr16-5218 chr16 26706346 26706556 + 7.54 0.000 Intergenic Intergenic -360476 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr5-6315 chr5 127875777 127875987 + 7.54 0.000 intron (NM_001317938, intron 6 of 6) intron (NM_001317938, intron 6 of 6) 172493 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr7-4884 chr7 116653241 116653451 + 7.54 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -18850 NM_000245 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr3-10131 chr3 113607963 113608173 + 7.54 0.000 intron (NM_001322295, intron 14 of 24) intron (NM_001322295, intron 14 of 24) 13192 NR_039648 100616476 NR_039648 ENSG00000265253 MIR4446 mir-4446 microRNA 4446 ncRNA chr8-5253 chr8 132688489 132688699 + 7.54 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -13049 NR_135909 23639 Hs.591865 NM_012472 ENSG00000129295 LRRC6 CILD19|LRTP|TSLRP leucine rich repeat containing 6 protein-coding chr10-2279 chr10 939111 939321 + 7.54 0.000 intron (NR_120629, intron 1 of 2) intron (NR_120629, intron 1 of 2) 6190 NR_120629 101927762 Hs.151159 NR_120629 ENSG00000229869 LOC101927762 - uncharacterized LOC101927762 ncRNA chr3-3704 chr3 170447972 170448182 + 7.54 0.000 Intergenic Intergenic -19208 NR_135556 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr10-9171 chr10 129814415 129814625 + 7.54 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 28854 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr4-7695 chr4 88402152 88402362 + 7.54 0.000 intron (NM_001165136, intron 8 of 21) L2a|LINE|L2 23518 NM_017912 55008 Hs.529317 NM_017912 ENSG00000138642 HERC6 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 protein-coding chr7-4875 chr7 112049751 112049961 + 7.54 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 156543 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr11-8632 chr11 2518740 2518950 + 7.54 0.000 intron (NM_181798, intron 1 of 15) intron (NM_181798, intron 1 of 15) 57391 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr2-6930 chr2 110746938 110747148 + 7.54 0.000 intron (NM_001371254, intron 1 of 18) LTR71B|LTR|ERV1 14470 NM_001371254 chr8-6945 chr8 104807179 104807389 + 7.54 0.000 Intergenic Intergenic -218260 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr17-5765 chr17 61065528 61065738 + 7.54 0.000 intron (NM_001330413, intron 20 of 25) intron (NM_001330413, intron 20 of 25) 302071 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr8-4477 chr8 117731424 117731634 + 7.54 0.000 Intergenic Intergenic 189384 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr10-8662 chr10 100518807 100519017 + 7.54 0.000 intron (NM_015490, intron 1 of 25) intron (NM_015490, intron 1 of 25) 949 NM_015490 25956 Hs.18889 NM_015490 ENSG00000075826 SEC31B SEC31B-1|SEC31L2 SEC31 homolog B, COPII coat complex component protein-coding chr8-5405 chr8 27666700 27666910 + 7.54 0.000 intron (NM_182826, intron 5 of 5) intron (NM_182826, intron 5 of 5) 32745 NM_182826 51435 Hs.128856 NM_016240 ENSG00000168077 SCARA3 APC7|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A member 3 protein-coding chr7-5902 chr7 96314482 96314692 + 7.54 0.000 intron (NM_001160210, intron 1 of 17) intron (NM_001160210, intron 1 of 17) 7511 NR_027662 10165 Hs.489190 NM_014251 ENSG00000004864 SLC25A13 ARALAR2|CITRIN|CTLN2 solute carrier family 25 member 13 protein-coding chr11-10414 chr11 115215719 115215929 + 7.54 0.000 intron (NM_001098517, intron 6 of 8) intron (NM_001098517, intron 6 of 8) -117753 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr16-6379 chr16 52750658 52750868 + 7.54 0.000 Intergenic AluSx1|SINE|Alu -143788 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr11-4802 chr11 3835164 3835374 + 7.54 0.000 intron (NM_001665, intron 1 of 1) L2c|LINE|L2 5690 NM_001665 391 Hs.501728 NM_001665 ENSG00000177105 RHOG ARHG ras homolog family member G protein-coding chr3-2463 chr3 109321479 109321689 + 7.54 0.000 Intergenic AluSp|SINE|Alu -5067 NM_138815 151871 Hs.351113 NM_138815 ENSG00000163530 DPPA2 CT100|ECAT15-2|PESCRG1 developmental pluripotency associated 2 protein-coding chr5-8586 chr5 137923887 137924097 + 7.54 0.000 intron (NM_001300921, intron 10 of 14) intron (NM_001300921, intron 10 of 14) 34535 NM_001258449 27039 Hs.716884 NM_014386 ENSG00000078795 PKD2L2 TRPP5 polycystin 2 like 2, transient receptor potential cation channel protein-coding chr19-6456 chr19 16850161 16850371 + 7.54 0.000 intron (NM_001297595, intron 5 of 18) intron (NM_001297595, intron 5 of 18) -13008 NM_001297597 23309 Hs.13999 NM_015260 ENSG00000127511 SIN3B - SIN3 transcription regulator family member B protein-coding chr7-4770 chr7 76919787 76919997 + 7.54 0.000 Intergenic Intergenic -60930 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr2-10403 chr2 186612428 186612638 + 7.54 0.000 intron (NM_001145000, intron 2 of 27) LTR84b|LTR|ERVL 12328 NM_001144999 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr10-3398 chr10 29757617 29757827 + 7.54 0.000 Intergenic Intergenic -20786 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr16-3245 chr16 86877970 86878180 + 7.54 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat 155984 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr1-4904 chr1 38517485 38517695 + 7.54 0.000 Intergenic Intergenic 42394 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr7-6286 chr7 138298205 138298415 + 7.54 0.000 Intergenic Intergenic -161949 NM_015905 8805 Hs.490287 NM_003852 ENSG00000122779 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding chr6-4401 chr6 26061717 26061927 + 7.54 0.000 Intergenic A-rich|Low_complexity|Low_complexity -5351 NM_005319 3006 Hs.7644 NM_005319 ENSG00000187837 HIST1H1C H1.2|H1C|H1F2|H1s-1 histone cluster 1 H1 family member c protein-coding chr2-10306 chr2 139186115 139186325 + 7.54 0.000 Intergenic Intergenic 288896 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr8-5162 chr8 89705041 89705251 + 7.54 0.000 Intergenic L1PBb|LINE|L1 52565 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr17-7782 chr17 39576281 39576491 + 7.54 0.000 Intergenic Intergenic 31534 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chrX-2646 chrX 112026543 112026753 + 7.54 0.000 intron (NM_012471, intron 1 of 10) intron (NM_012471, intron 1 of 10) 56128 NM_012471 7224 Hs.657709 NM_012471 ENSG00000072315 TRPC5 PPP1R159|TRP5 transient receptor potential cation channel subfamily C member 5 protein-coding chr4-8282 chr4 142091718 142091928 + 7.54 0.000 intron (NM_001331040, intron 23 of 25) intron (NM_001331040, intron 23 of 25) 455240 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr13-2868 chr13 110741490 110741700 + 7.54 0.000 Intergenic MER65-int|LTR|ERV1 26158 NM_001267728 3621 Hs.46700 NM_005537 ENSG00000153487 ING1 p24ING1c|p33|p33ING1|p33ING1b|p47|p47ING1a inhibitor of growth family member 1 protein-coding chr5-4626 chr5 33458186 33458396 + 7.54 0.000 intron (NR_047677, intron 8 of 17) intron (NR_047677, intron 8 of 17) 17515 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr12-2085 chr12 14260614 14260824 + 7.54 0.000 Intergenic Intergenic -104913 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr1-12340 chr1 1454768 1454978 + 7.54 0.000 intron (NM_001039211, intron 4 of 11) intron (NM_001039211, intron 4 of 11) 5184 NM_001039211 219293 Hs.724767 NM_001039211 ENSG00000215915 ATAD3C - ATPase family AAA domain containing 3C protein-coding chr12-6536 chr12 111983109 111983319 + 7.54 0.000 intron (NM_001294314, intron 4 of 12) AluSx|SINE|Alu 29951 NM_001193531 89894 Hs.506815 NM_138341 ENSG00000198270 TMEM116 - transmembrane protein 116 protein-coding chr11-7017 chr11 117830348 117830558 + 7.54 0.000 intron (NM_001204268, intron 6 of 10) L2a|LINE|L2 -2364 NM_021603 486 Hs.731865 NM_001680 ENSG00000137731 FXYD2 ATP1G1|HOMG2 FXYD domain containing ion transport regulator 2 protein-coding chr5-5351 chr5 131811061 131811271 + 7.54 0.000 intron (NM_001303622, intron 12 of 12) intron (NM_001303622, intron 12 of 12) -14149 NM_001346113 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 - folliculin interacting protein 1 protein-coding chr19-4543 chr19 9868966 9869176 + 7.54 0.000 intron (NM_058164, intron 1 of 5) L4_A_Mam|LINE|RTE-X -10896 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr5-6750 chr5 79585179 79585389 + 7.54 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -27133 NM_001114394 167153 Hs.418198 NM_173797 ENSG00000164329 TENT2 APD4|GLD2|PAPD4|TUT2 terminal nucleotidyltransferase 2 protein-coding chr13-4204 chr13 92214832 92215042 + 7.54 0.000 intron (NM_004466, intron 7 of 7) MLT1D|LTR|ERVL-MaLR 137270 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr9-5606 chr9 115395762 115395972 + 7.54 0.000 intron (NR_163556, intron 5 of 7) intron (NR_163556, intron 5 of 7) 254049 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr19-5041 chr19 49029959 49030169 + 7.54 0.000 Intergenic Intergenic 1723 NR_024244 100170228 Hs.717308 NR_024244 SNAR-G2 - small NF90 (ILF3) associated RNA G2 snRNA chr7-2690 chr7 22255990 22256200 + 7.54 0.000 intron (NM_012294, intron 7 of 25) intron (NM_012294, intron 7 of 25) -61285 NM_001367602 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr5-3527 chr5 9707943 9708153 + 7.54 0.000 intron (NR_027112, intron 9 of 12) intron (NR_027112, intron 9 of 12) -77697 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr4-2747 chr4 8000891 8001101 + 7.54 0.000 intron (NM_001130084, intron 15 of 19) intron (NM_001130084, intron 15 of 19) 4385 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr15-2564 chr15 52860794 52861004 + 7.54 0.000 Intergenic Intergenic -70563 NM_004498 3175 Hs.555318 NM_004498 ENSG00000169856 ONECUT1 HNF-6|HNF6|HNF6A one cut homeobox 1 protein-coding chr1-6869 chr1 112855179 112855389 + 7.54 0.000 Intergenic MER41A|LTR|ERV1 -4641 NR_103746 100996702 Hs.632431 NR_103746 ENSG00000215866 LINC01356 - long intergenic non-protein coding RNA 1356 ncRNA chrX-4191 chrX 34988248 34988458 + 7.54 0.000 Intergenic PRIMA41-int|LTR|ERV1 45557 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr22-2557 chr22 26795837 26796047 + 7.54 0.000 Intergenic MIRb|SINE|MIR -64269 NR_146604 110091768 Hs.639900 NR_146604 LOC110091768 - uncharacterized LOC110091768 ncRNA chr4-5283 chr4 175473582 175473792 + 7.54 0.000 Intergenic LTR6B|LTR|ERV1 313989 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr16-3496 chr16 8683261 8683471 + 7.54 0.000 intron (NM_020686, intron 1 of 15) 7SLRNA|srpRNA|srpRNA 8749 NM_020686 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr11-6584 chr11 72488155 72488365 + 7.54 0.000 Intergenic L1MDa|LINE|L1 -53576 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr4-6473 chr4 147923424 147923634 + 7.54 0.000 intron (NM_024605, intron 13 of 22) intron (NM_024605, intron 13 of 22) 140934 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr12-6710 chr12 4862485 4862695 + 7.54 0.000 Intergenic Intergenic -47315 NM_000217 3736 Hs.416139 NM_000217 ENSG00000111262 KCNA1 AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1 potassium voltage-gated channel subfamily A member 1 protein-coding chr13-4160 chr13 86749273 86749483 + 7.54 0.000 Intergenic Intergenic -162542 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr6-2437 chr6 166406360 166406570 + 7.54 0.000 Intergenic Intergenic -23452 NR_073093 51660 Hs.172755 NM_016098 ENSG00000060762 MPC1 BRP44L|CGI-129|MPYCD|SLC54A1 mitochondrial pyruvate carrier 1 protein-coding chr20-2492 chr20 33159136 33159346 + 7.54 0.000 Intergenic Intergenic -2529 NM_001319164 140683 Hs.125960 NM_080574 ENSG00000131050 BPIFA2 C20orf70|PSP|SPLUNC2|bA49G10.1 BPI fold containing family A member 2 protein-coding chr1-10556 chr1 172399398 172399608 + 7.54 0.000 intron (NM_001350206, intron 20 of 20) intron (NM_001350206, intron 20 of 20) -21182 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr7-5354 chr7 30255466 30255676 + 7.54 0.000 intron (NR_136267, intron 2 of 3) intron (NR_136267, intron 2 of 3) -29026 NM_147128 223082 Hs.263912 NM_147128 ENSG00000180233 ZNRF2 RNF202 zinc and ring finger 2 protein-coding chr2-10481 chr2 219695634 219695844 + 7.54 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 68109 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr22-4271 chr22 48976645 48976855 + 7.54 0.000 Intergenic Intergenic 109980 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr3-7388 chr3 81247745 81247955 + 7.54 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 253982 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr9-7313 chr9 10859086 10859296 + 7.54 0.000 Intergenic MamRTE1|LINE|RTE-BovB 245985 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr18-1562 chr18 29534977 29535187 + 7.54 0.000 Intergenic Intergenic -763828 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr12-4942 chr12 69867743 69867953 + 7.54 0.000 intron (NM_182530, intron 2 of 24) intron (NM_182530, intron 2 of 24) 42621 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr12-4947 chr12 71170594 71170804 + 7.54 0.000 Intergenic Intergenic -12700 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr1-5604 chr1 9997211 9997421 + 7.54 0.000 promoter-TSS (NM_052960) promoter-TSS (NM_052960) 88 NM_052960 116362 Hs.422688 NM_052960 ENSG00000162444 RBP7 CRABP4|CRBP4|CRBPIV retinol binding protein 7 protein-coding chrX-5074 chrX 124939668 124939878 + 7.54 0.000 intron (NM_014253, intron 1 of 30) L2a|LINE|L2 24044 NM_001163279 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr3-7842 chr3 112374226 112374436 + 7.54 0.000 Intergenic L3|LINE|CR1 41175 NR_158642 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding chr2-2546 chr2 207836364 207836574 + 7.54 0.000 intron (NM_001080475, intron 7 of 7) intron (NM_001080475, intron 7 of 7) -66563 NM_003468 7855 Hs.17631 NM_003468 ENSG00000163251 FZD5 C2orf31|HFZ5 frizzled class receptor 5 protein-coding chr6-4683 chr6 53956039 53956249 + 7.54 0.000 intron (NR_125842, intron 1 of 3) intron (NR_125842, intron 1 of 3) 26162 NR_125842 101927189 Hs.453592 NR_125842 ENSG00000236740 LOC101927189 - uncharacterized LOC101927189 ncRNA chr7-7401 chr7 72016126 72016336 + 7.54 0.000 intron (NM_001363460, intron 4 of 5) AluSx1|SINE|Alu 321160 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr1-14427 chr1 45226115 45226325 + 7.54 0.000 Intergenic Intergenic -19615 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr10-6076 chr10 130578649 130578859 + 7.54 0.000 Intergenic Intergenic 383914 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr18-1907 chr18 32817196 32817406 + 7.54 0.000 Intergenic MER2|DNA|TcMar-Tigger -44278 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr12-4729 chr12 51362229 51362439 + 7.54 0.000 intron (NM_007210, intron 6 of 11) intron (NM_007210, intron 6 of 11) -15655 NM_001971 1990 Hs.348395 NM_001971 ENSG00000139610 CELA1 ELA1 chymotrypsin like elastase 1 protein-coding chr21-983 chr21 9938334 9938544 + 7.54 0.000 Intergenic LTR33A_|LTR|ERVL -117378 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr2-7459 chr2 14604087 14604297 + 7.54 0.000 Intergenic Intergenic -28525 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr11-3770 chr11 57009645 57009855 + 7.54 0.000 Intergenic Intergenic 20836 NM_001005323 390181 Hs.554520 NM_001005323 ENSG00000181273 OR5AK2 - olfactory receptor family 5 subfamily AK member 2 protein-coding chr1-14969 chr1 89166306 89166516 + 7.54 0.000 intron (NM_207398, intron 2 of 10) intron (NM_207398, intron 2 of 10) 9592 NM_207398 388646 Hs.591450 NM_207398 ENSG00000213512 GBP7 GBP4L guanylate binding protein 7 protein-coding chr16-1637 chr16 4538650 4538860 + 7.54 0.000 promoter-TSS (NM_013399) promoter-TSS (NM_013399) 18 NM_001199055 29965 Hs.654653 NM_013399 ENSG00000089486 CDIP1 C16orf5|CDIP|I1|LITAFL cell death inducing p53 target 1 protein-coding chr22-2887 chr22 45940420 45940630 + 7.54 0.000 intron (NM_058238, intron 2 of 3) intron (NM_058238, intron 2 of 3) 36637 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr3-2857 chr3 37453419 37453629 + 7.54 0.000 intron (NM_002207, intron 1 of 27) intron (NM_002207, intron 1 of 27) 1383 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr10-8564 chr10 95171190 95171400 + 7.54 0.000 Intergenic Intergenic -22905 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr6-2667 chr6 7116272 7116482 + 7.54 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 8416 NM_001003700 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr4-6310 chr4 86535534 86535744 + 7.54 0.000 Intergenic Intergenic 6913 NR_039657 100616463 NR_039657 ENSG00000266515 MIR4452 - microRNA 4452 ncRNA chr10-8573 chr10 95443675 95443885 + 7.54 0.000 intron (NM_001290295, intron 2 of 24) intron (NM_001290295, intron 2 of 24) -2600 NM_001034954 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr6-5038 chr6 111833879 111834089 + 7.54 0.000 intron (NM_153047, intron 2 of 13) L1ME3E|LINE|L1 39087 NM_153047 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr5-7108 chr5 39999 40209 + 7.54 0.000 Intergenic Intergenic -52064 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr14-2560 chr14 31959847 31960057 + 7.54 0.000 Intergenic Intergenic 15099 NR_146544 105370439 NR_146544 ENSG00000258474 LINC02313 - long intergenic non-protein coding RNA 2313 ncRNA chr1-7197 chr1 214337561 214337771 + 7.54 0.000 TTS (NM_020197) TTS (NM_020197) 56507 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr22-1764 chr22 27212541 27212751 + 7.54 0.000 Intergenic Intergenic 12033 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr15-4485 chr15 50731767 50731977 + 7.54 0.000 intron (NM_032802, intron 9 of 14) AluSx1|SINE|Alu 33834 NM_032802 84888 Hs.401537 NM_032802 ENSG00000138600 SPPL2A IMP3|PSL2 signal peptide peptidase like 2A protein-coding chr8-1555 chr8 118111853 118112063 + 7.54 0.000 promoter-TSS (NM_000127) promoter-TSS (NM_000127) -139 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr1-9920 chr1 74773235 74773445 + 7.54 0.000 Intergenic Intergenic -39932 NM_001130043 1429 Hs.83114 NM_001889 ENSG00000116791 CRYZ - crystallin zeta protein-coding chr13-2190 chr13 20425042 20425252 + 7.54 0.000 intron (NM_001363647, intron 4 of 6) intron (NM_001363647, intron 4 of 6) 8699 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr19-6876 chr19 44969247 44969457 + 7.54 0.000 intron (NM_001282175, intron 2 of 13) MIR|SINE|MIR 13972 NM_001294 1209 Hs.444441 NM_001294 ENSG00000104853 CLPTM1 - CLPTM1 regulator of GABA type A receptor forward trafficking protein-coding chr5-5631 chr5 155016497 155016707 + 7.54 0.000 exon (NM_001099293, exon 1 of 1) exon (NM_001099293, exon 1 of 1) 2847 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr15-4859 chr15 75131034 75131244 + 7.54 0.000 Intergenic L1MB2|LINE|L1 -70743 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr4-8475 chr4 157938810 157939020 + 7.54 0.000 Intergenic Intergenic -231837 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr8-3156 chr8 86834384 86834594 + 7.54 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -31926 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr6-5804 chr6 12878760 12878970 + 7.54 0.000 intron (NM_001322308, intron 3 of 13) intron (NM_001322308, intron 3 of 13) -78491 NM_001322311 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr13-1067 chr13 33455083 33455293 + 7.54 0.000 intron (NM_001243476, intron 4 of 17) intron (NM_001243476, intron 4 of 17) -119922 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chr19-5273 chr19 49481209 49481419 + 7.54 0.000 intron (NM_001459, intron 8 of 8) L2b|LINE|L2 -6240 NM_001270491 23521 Hs.523185 NM_012423 ENSG00000142541 RPL13A L13A|TSTA1 ribosomal protein L13a protein-coding chr16-6223 chr16 28502253 28502463 + 7.54 0.000 intron (NM_145659, intron 3 of 4) intron (NM_145659, intron 3 of 4) 4476 NM_145659 246778 Hs.528111 NM_145659 ENSG00000197272 IL27 IL-27|IL-27A|IL27A|IL27p28|IL30|p28 interleukin 27 protein-coding chr3-2945 chr3 57958698 57958908 + 7.54 0.000 Intergenic Intergenic -49619 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr11-8840 chr11 12574092 12574302 + 7.54 0.000 Intergenic L1MEc|LINE|L1 -100224 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr22-4021 chr22 40527975 40528185 + 7.54 0.000 intron (NM_020831, intron 3 of 14) intron (NM_020831, intron 3 of 14) 5747 NM_001318139 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr3-5758 chr3 21968289 21968499 + 7.54 0.000 intron (NR_046876, intron 2 of 3) L1MA3|LINE|L1 11255 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr9-5669 chr9 123311114 123311324 + 7.54 0.000 Intergenic Intergenic -42633 NM_018387 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr12-6872 chr12 19575736 19575946 + 7.54 0.000 Intergenic Intergenic 135242 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr3-8186 chr3 39849803 39850013 + 7.54 0.000 intron (NM_001284424, intron 1 of 15) intron (NM_001284424, intron 1 of 15) 40248 NM_001284425 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr21-718 chr21 34736201 34736411 + 7.54 0.000 intron (NR_024351, intron 1 of 5) intron (NR_024351, intron 1 of 5) 876 NR_024351 54064 Hs.436868 NR_024351 ENSG00000230978 LINC00160 C21orf52|NCRNA00160 long intergenic non-protein coding RNA 160 ncRNA chr7-5621 chr7 53385077 53385287 + 7.54 0.000 Intergenic LTR12C|LTR|ERV1 349549 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr12-7852 chr12 103904640 103904850 + 7.54 0.000 intron (NR_027249, intron 4 of 15) L2a|LINE|L2 25466 NR_027249 253724 Hs.506549 NR_027249 ENSG00000214198 TTC41P GNN|GNNP tetratricopeptide repeat domain 41, pseudogene pseudo chr1-14349 chr1 40835258 40835468 + 7.54 0.000 intron (NM_004700, intron 12 of 13) intron (NM_004700, intron 12 of 13) 27000 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr12-6698 chr12 4430760 4430970 + 7.54 0.000 Intergenic Intergenic 14749 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr12-3745 chr12 40519089 40519299 + 7.54 0.000 intron (NM_173600, intron 97 of 173) intron (NM_173600, intron 97 of 173) 125800 NM_173600 283463 Hs.632712 NM_173600 MUC19 MUC-19 mucin 19, oligomeric protein-coding chr6-6507 chr6 120036051 120036261 + 7.54 0.000 Intergenic Intergenic 20977 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr20-3686 chr20 13980605 13980815 + 7.54 0.000 intron (NM_001363752, intron 1 of 16) L1MA7|LINE|L1 9904 NM_001271539 80343 Hs.590879 NM_025229 ENSG00000101251 SEL1L2 C20orf50|sel-1L2 SEL1L2 adaptor subunit of ERAD E3 ligase protein-coding chr7-5779 chr7 77293591 77293801 + 7.54 0.000 intron (NM_020879, intron 18 of 18) intron (NM_020879, intron 18 of 18) -93877 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding chr2-6834 chr2 68073398 68073608 + 7.54 0.000 Intergenic Intergenic -10499 NM_173177 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding chr6-4513 chr6 37761426 37761636 + 7.54 0.000 Intergenic AluJr|SINE|Alu -58196 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr1-10082 chr1 94401267 94401477 + 7.54 0.000 Intergenic Intergenic -17005 NM_001122674 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr3-9865 chr3 80834546 80834756 + 7.54 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 63947 NR_147145 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr10-7457 chr10 7665790 7666000 + 7.54 0.000 intron (NM_001001851, intron 1 of 11) intron (NM_001001851, intron 1 of 11) 1071 NM_030569 80760 Hs.498586 NM_030569 ENSG00000123243 ITIH5 ITI-HC5|PP14776 inter-alpha-trypsin inhibitor heavy chain 5 protein-coding chr19-4537 chr19 9226887 9227097 + 7.54 0.000 Intergenic L1PA13|LINE|L1 -12121 NM_001005191 125958 Hs.446910 NM_001005191 ENSG00000174667 OR7D4 OR19-7|OR19-B|OR19B|OR7D4P|hg105 olfactory receptor family 7 subfamily D member 4 protein-coding chr8-5070 chr8 35676895 35677105 + 7.54 0.000 intron (NR_125819, intron 4 of 4) Charlie8|DNA|hAT-Charlie 33320 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr8-3811 chr8 28481957 28482167 + 7.54 0.000 intron (NM_172366, intron 2 of 8) LTR40c|LTR|ERVL 8167 NM_172366 157574 Hs.741522 NM_172366 ENSG00000214050 FBXO16 FBX16 F-box protein 16 protein-coding chr6-5469 chr6 160330288 160330498 + 7.54 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -17985 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr8-6718 chr8 86309275 86309485 + 7.54 0.000 Intergenic AluSx4|SINE|Alu -33167 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding chrX-2690 chrX 118928195 118928405 + 7.54 0.000 Intergenic MER68|LTR|ERVL -46314 NR_110311 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr8-4223 chr8 86706516 86706726 + 7.54 0.000 intron (NM_019098, intron 3 of 17) intron (NM_019098, intron 3 of 17) 37054 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding chr19-5174 chr19 9542715 9542925 + 7.54 0.000 Intergenic HERVH-int|LTR|ERV1 4154 NR_134921 101928238 Hs.324978 NR_134920 ENSG00000278611 ZNF426-DT - ZNF426 divergent transcript ncRNA chr1-4695 chr1 231756944 231757154 + 7.54 0.000 intron (NM_001164540, intron 4 of 10) intron (NM_001164540, intron 4 of 10) 61468 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 ncRNA chr11-9358 chr11 47243373 47243583 + 7.54 0.000 intron (NM_001302492, intron 6 of 9) intron (NM_001302492, intron 6 of 9) -4822 NM_001251935 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr8-4517 chr8 122263928 122264138 + 7.54 0.000 Intergenic MER70C|LTR|ERVL 304611 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr9-6435 chr9 75820230 75820440 + 7.54 0.000 Intergenic L1PA7|LINE|L1 -70309 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr4-5997 chr4 187236755 187236965 + 7.54 0.000 Intergenic Intergenic 34874 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr17-7401 chr17 8543159 8543369 + 7.54 0.000 intron (NM_001256012, intron 13 of 42) intron (NM_001256012, intron 13 of 42) 87461 NM_005964 4628 Hs.16355 NM_005964 ENSG00000133026 MYH10 NMMHC-IIB|NMMHCB myosin heavy chain 10 protein-coding chr22-3936 chr22 37013654 37013864 + 7.54 0.000 intron (NM_003312, intron 2 of 2) intron (NM_003312, intron 2 of 2) 5688 NM_003312 7263 Hs.474783 NM_003312 ENSG00000128311 TST RDS thiosulfate sulfurtransferase protein-coding chr9-7178 chr9 135562250 135562460 + 7.54 0.000 exon (NM_002571, exon 2 of 7) exon (NM_002571, exon 2 of 7) 599 NM_002571 5047 Hs.532325 NM_002571 ENSG00000122133 PAEP GD|GdA|GdF|GdS|PAEG|PEP|PP14|ZIF-1 progestagen associated endometrial protein protein-coding chr17-4897 chr17 72572129 72572339 + 7.54 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 20570 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr5-6343 chr5 135683972 135684182 + 7.54 0.000 intron (NM_001349335, intron 3 of 10) intron (NM_001349335, intron 3 of 10) -30142 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr4-6188 chr4 46616782 46616992 + 7.54 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -226759 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr17-4697 chr17 28886736 28886946 + 7.54 0.000 intron (NM_001330170, intron 2 of 10) intron (NM_001330170, intron 2 of 10) 10892 NM_004475 2319 Hs.514038 NM_004475 ENSG00000132589 FLOT2 ECS-1|ECS1|ESA|ESA1|M17S1 flotillin 2 protein-coding chr16-4193 chr16 11364665 11364875 + 7.54 0.000 Intergenic Intergenic 19311 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr4-6335 chr4 94412595 94412805 + 7.54 0.000 Intergenic Intergenic -39157 NM_001256425 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr10-8062 chr10 65850656 65850866 + 7.54 0.000 Intergenic L1PB1|LINE|L1 279336 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr15-2948 chr15 48547969 48548179 + 7.54 0.000 intron (NM_000138, intron 6 of 65) intron (NM_000138, intron 6 of 65) 97714 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr4-3678 chr4 43381510 43381720 + 7.54 0.000 Intergenic Intergenic 110928 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr17-4225 chr17 41634546 41634756 + 7.54 0.000 intron (NR_033415, intron 3 of 10) AluSq2|SINE|Alu 5548 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo chr12-5905 chr12 62062202 62062412 + 7.54 0.000 intron (NM_178539, intron 1 of 4) intron (NM_178539, intron 1 of 4) 130532 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr7-7807 chr7 2371149 2371359 + 7.54 0.000 intron (NM_001037283, intron 10 of 18) L1MB7|LINE|L1 16427 NM_003751 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr19-5905 chr19 48048599 48048809 + 7.54 0.000 intron (NM_001159322, intron 16 of 16) L2a|LINE|L2 -4625 NM_019855 56344 Hs.117694 NM_016367 ENSG00000105507 CABP5 CABP3 calcium binding protein 5 protein-coding chr12-4048 chr12 49518957 49519167 + 7.54 0.000 intron (NM_001293285, intron 11 of 14) intron (NM_001293285, intron 11 of 14) -19968 NM_001314030 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr1-12206 chr1 203169880 203170090 + 7.54 0.000 intron (NM_004997, intron 7 of 10) intron (NM_004997, intron 7 of 10) 5841 NM_004997 4608 Hs.927 NM_004997 ENSG00000133055 MYBPH - myosin binding protein H protein-coding chr3-8903 chr3 12605429 12605639 + 7.54 0.000 intron (NM_001354695, intron 4 of 14) AluSz|SINE|Alu 48447 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr13-4394 chr13 109474107 109474317 + 7.54 0.000 Intergenic Intergenic 73516 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr21-1332 chr21 22099726 22099936 + 7.54 0.000 intron (NR_038400, intron 1 of 5) intron (NR_038400, intron 1 of 5) 1214 NR_038400 54143 Hs.352631 NR_038400 ENSG00000184856 LINC00308 C21orf74|NCRNA00308|PRED16 long intergenic non-protein coding RNA 308 ncRNA chr12-6866 chr12 18668156 18668366 + 7.54 0.000 Intergenic Intergenic 69248 NM_001330769 89869 Hs.97542 NM_033123 ENSG00000139151 PLCZ1 NYD-SP27|PLC-zeta-1|PLCzeta|SPGF17 phospholipase C zeta 1 protein-coding chr6-5814 chr6 17033185 17033395 + 7.54 0.000 Intergenic Intergenic -68968 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr1-8656 chr1 205641718 205641928 + 7.54 0.000 Intergenic Intergenic -8951 NM_001973 2005 Hs.497520 NM_001973 ENSG00000158711 ELK4 SAP1 ETS transcription factor ELK4 protein-coding chr2-7768 chr2 39695180 39695390 + 7.54 0.000 intron (NM_152390, intron 1 of 3) intron (NM_152390, intron 1 of 3) 29368 NM_152390 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr8-5984 chr8 22013300 22013510 + 7.54 0.000 Intergenic AluJb|SINE|Alu -10729 NM_001286680 10361 Hs.131055 NM_182795 ENSG00000158806 NPM2 - nucleophosmin/nucleoplasmin 2 protein-coding chrX-2707 chrX 120370644 120370854 + 7.54 0.000 exon (NM_001142447, exon 3 of 8) exon (NM_001142447, exon 3 of 8) 8660 NM_001142447 23439 Hs.292599 NM_012069 ENSG00000101892 ATP1B4 - ATPase Na+/K+ transporting family member beta 4 protein-coding chr9-3150 chr9 106098325 106098535 + 7.54 0.000 Intergenic Intergenic 403889 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr3-11170 chr3 190861463 190861673 + 7.54 0.000 intron (NM_001146686, intron 1 of 4) intron (NM_001146686, intron 1 of 4) 1126 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr1-16121 chr1 204803316 204803526 + 7.54 0.000 Intergenic Intergenic -25231 NM_001365986 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr1-9140 chr1 19039735 19039945 + 7.54 0.000 Intergenic AluJb|SINE|Alu -83164 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr8-7225 chr8 127112144 127112354 + 7.54 0.000 Intergenic Intergenic -30028 NR_119373 103164619 Hs.571401 NR_119373 ENSG00000254166 PCAT2 CARLO4|CARLo-4|PCA2|TCONS_00015167 prostate cancer associated transcript 2 ncRNA chr6-8416 chr6 151148170 151148380 + 7.54 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 45600 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA GL000216.2-6 GL000216.2 5746 5956 + 7.54 0.000 NA NA NA NA chr17-3433 chr17 17930002 17930212 + 7.54 0.000 intron (NM_001288787, intron 1 of 13) intron (NM_001288787, intron 1 of 13) 42293 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr11-10027 chr11 82194426 82194636 + 7.54 0.000 intron (NR_120571, intron 3 of 7) MER44A|DNA|TcMar-Tigger 209382 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr11-7345 chr11 66448840 66449050 + 7.54 0.000 Intergenic MER4D1|LTR|ERV1 -10097 NM_016050 65003 Hs.418450 NM_016050 ENSG00000174547 MRPL11 CGI-113|L11MT|MRP-L11 mitochondrial ribosomal protein L11 protein-coding chr19-3839 chr19 14598975 14599185 + 7.54 0.000 intron (NM_207390, intron 10 of 12) AluSx|SINE|Alu 15996 NM_207390 388512 Hs.567933 NM_207390 ENSG00000187912 CLEC17A - C-type lectin domain containing 17A protein-coding chr8-4492 chr8 119051683 119051893 + 7.54 0.000 intron (NM_001324095, intron 3 of 7) intron (NM_001324095, intron 3 of 7) -15459 NM_006438 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding chr11-10148 chr11 91471971 91472181 + 7.54 0.000 Intergenic L1PA13|LINE|L1 -602874 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr1-6984 chr1 164728901 164729111 + 7.54 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 45635 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr3-9441 chr3 49151795 49152005 + 7.54 0.000 TTS (NR_004405) TTS (NR_004405) 2501 NR_004405 22973 Hs.607092 NR_004405 LAMB2P1 LAMB2L laminin subunit beta 2 pseudogene 1 pseudo chr8-3868 chr8 37313923 37314133 + 7.54 0.000 Intergenic Intergenic 179885 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr10-9007 chr10 121804438 121804648 + 7.54 0.000 intron (NM_001001976, intron 10 of 11) intron (NM_001001976, intron 10 of 11) 123488 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr8-7277 chr8 130451847 130452057 + 7.54 0.000 Intergenic Intergenic -8278 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr10-5181 chr10 59372600 59372810 + 7.54 0.000 Intergenic Chap1_Mam|DNA|hAT-Charlie -9524 NM_001347840 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr6-7610 chr6 76662554 76662764 + 7.54 0.000 Intergenic Intergenic -69036 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr5-8045 chr5 91605332 91605542 + 7.54 0.000 Intergenic L1ME4a|LINE|L1 -222120 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr5-9032 chr5 168430705 168430915 + 7.54 0.000 intron (NM_001161661, intron 14 of 22) intron (NM_001161661, intron 14 of 22) -55661 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chr3-10011 chr3 100849834 100850044 + 7.54 0.000 intron (NM_001349332, intron 15 of 35) intron (NM_001349332, intron 15 of 35) 140397 NM_001195478 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr15-4393 chr15 43117447 43117657 + 7.54 0.000 Intergenic LTR16A|LTR|ERVL -11514 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr12-7350 chr12 56063075 56063285 + 7.54 0.000 Intergenic Intergenic -16845 NM_001982 2065 Hs.118681 NM_001982 ENSG00000065361 ERBB3 ErbB-3|FERLK|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 erb-b2 receptor tyrosine kinase 3 protein-coding chr11-4390 chr11 77117228 77117438 + 7.54 0.000 intron (NM_004055, intron 7 of 12) intron (NM_004055, intron 7 of 12) -10913 NM_001369365 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr7-6938 chr7 88691498 88691708 + 7.54 0.000 Intergenic L1MC4|LINE|L1 -68097 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chr1-7506 chr1 151704978 151705188 + 7.54 0.000 exon (NM_001291106, exon 12 of 13) exon (NM_001291106, exon 12 of 13) 11720 NM_007185 11189 Hs.26047 NM_007185 ENSG00000159409 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP Elav-like family member 3 protein-coding chr10-4893 chr10 19430161 19430371 + 7.54 0.000 intron (NM_001142308, intron 28 of 39) AluY|SINE|Alu 298284 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr7-2984 chr7 6701901 6702111 + 7.54 0.000 intron (NM_006956, intron 2 of 5) L2-3_Crp|LINE|L2 4941 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding chr6-7342 chr6 46366419 46366629 + 7.54 0.000 intron (NM_001251973, intron 2 of 4) MER31A|LTR|ERV1 -40632 NM_005822 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr19-5025 chr19 48085028 48085238 + 7.54 0.000 intron (NM_001159323, intron 9 of 16) intron (NM_001159323, intron 9 of 16) 23762 NR_132363 106144526 Hs.622570 NR_132363 ENSG00000269420 PLA2G4C-AS1 - PLA2G4C antisense RNA 1 ncRNA chr7-9241 chr7 121278573 121278783 + 7.54 0.000 intron (NM_024913, intron 22 of 22) intron (NM_024913, intron 22 of 22) -46689 NM_016087 51384 Hs.272375 NM_016087 ENSG00000002745 WNT16 - Wnt family member 16 protein-coding chr2-8019 chr2 69723383 69723593 + 7.54 0.000 intron (NM_001320698, intron 3 of 14) intron (NM_001320698, intron 3 of 14) -18646 NM_001153 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr15-3403 chr15 89439984 89440194 + 7.54 0.000 Intergenic L2b|LINE|L2 39918 NR_160724 105371031 NR_160724 LOC105371031 - uncharacterized LOC105371031 ncRNA chr19-4234 chr19 49601458 49601668 + 7.54 0.000 exon (NM_020719, exon 6 of 14) exon (NM_020719, exon 6 of 14) 10381 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding chr7-5798 chr7 80314237 80314447 + 7.54 0.000 Intergenic HAL1|LINE|L1 60097 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chr14-3878 chr14 90913898 90914108 + 7.54 0.000 intron (NM_001322227, intron 8 of 17) intron (NM_001322227, intron 8 of 17) -97573 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr9-8386 chr9 118745375 118745585 + 7.54 0.000 TTS (NR_151725) TTS (NR_151725) 65809 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr17-8422 chr17 76119396 76119606 + 7.54 0.000 Intergenic Intergenic -15714 NM_015219 23265 Hs.514496 NM_015219 ENSG00000182473 EXOC7 2-5-3p|BLOM4|EX070|EXO70|EXOC1|Exo70p|YJL085W exocyst complex component 7 protein-coding chr7-9563 chr7 142012932 142013142 + 7.54 0.000 intron (NM_004668, intron 3 of 47) MLT1H1|LTR|ERVL-MaLR 17158 NM_004668 8972 Hs.122785 NM_004668 ENSG00000257335 MGAM MG|MGA maltase-glucoamylase protein-coding chr1-11320 chr1 21992719 21992929 + 7.54 0.000 Intergenic AluJb|SINE|Alu -8833 NM_005747 10136 Hs.181289 NM_005747 ENSG00000142789 CELA3A ELA3|ELA3A chymotrypsin like elastase 3A protein-coding chr14-4577 chr14 49362124 49362334 + 7.54 0.000 Intergenic L1PA6|LINE|L1 224151 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr5-7325 chr5 16226365 16226575 + 7.54 0.000 Intergenic L2a|LINE|L2 46229 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA chr10-5276 chr10 68307192 68307402 + 7.54 0.000 intron (NM_001033083, intron 1 of 8) AluSx1|SINE|Alu -24396 NM_001322438 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding chr6-4177 chr6 1786425 1786635 + 7.54 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 176615 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr5-4291 chr5 149832828 149833038 + 7.54 0.000 exon (NM_133263, exon 5 of 12) exon (NM_133263, exon 5 of 12) 60993 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr18-2454 chr18 35781825 35782035 + 7.54 0.000 Intergenic MIR|SINE|MIR 122996 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr15-4255 chr15 33920153 33920363 + 7.54 0.000 intron (NM_020371, intron 2 of 5) L1MB2|LINE|L1 -48239 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr17-8255 chr17 66770805 66771015 + 7.54 0.000 intron (NM_002737, intron 13 of 16) intron (NM_002737, intron 13 of 16) -16162 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr20-1950 chr20 31562950 31563160 + 7.54 0.000 intron (NM_178580, intron 10 of 12) intron (NM_178580, intron 10 of 12) 10208 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr4-7938 chr4 109094080 109094290 + 7.54 0.000 intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 208473 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr19-4846 chr19 38182851 38183061 + 7.54 0.000 intron (NM_015073, intron 16 of 21) L2a|LINE|L2 19860 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr12-5978 chr12 91732168 91732378 + 7.54 0.000 Intergenic Intergenic 409440 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr5-8615 chr5 139181968 139182178 + 7.54 0.000 intron (NM_022464, intron 1 of 9) intron (NM_022464, intron 1 of 9) 16295 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr4-7529 chr4 75667480 75667690 + 7.54 0.000 intron (NM_203504, intron 1 of 10) intron (NM_203504, intron 1 of 10) 5574 NM_012297 9908 Hs.303676 NM_012297 ENSG00000138757 G3BP2 - G3BP stress granule assembly factor 2 protein-coding chr15-4916 chr15 77637345 77637555 + 7.54 0.000 intron (NM_001301195, intron 3 of 3) intron (NM_001301195, intron 3 of 3) -4314 NR_045123 253044 Hs.667685 NM_001242772 ENSG00000259666 LINGO1-AS1 - LINGO1 antisense RNA 1 ncRNA chr12-5334 chr12 115282004 115282214 + 7.54 0.000 Intergenic MIR|SINE|MIR -597934 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr3-6574 chr3 123632297 123632507 + 7.54 0.000 intron (NM_001321309, intron 28 of 32) intron (NM_001321309, intron 28 of 32) -11854 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr13-4036 chr13 73364306 73364516 + 7.54 0.000 Intergenic L2a|LINE|L2 -199833 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chrX-5047 chrX 123199018 123199228 + 7.54 0.000 intron (NM_007325, intron 2 of 15) intron (NM_007325, intron 2 of 15) 14845 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr2-13378 chr2 137644632 137644842 + 7.54 0.000 intron (NM_001316349, intron 21 of 27) intron (NM_001316349, intron 21 of 27) 283195 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr3-6377 chr3 88999098 88999308 + 7.54 0.000 Intergenic LTR1D1|LTR|ERV1 -108418 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr9-7859 chr9 85581275 85581485 + 7.54 0.000 intron (NM_015239, intron 23 of 25) MIRc|SINE|MIR 160649 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr2-5592 chr2 176741491 176741701 + 7.54 0.000 Intergenic Intergenic 103842 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr19-5183 chr19 11102790 11103000 + 7.54 0.000 intron (NM_001195800, intron 3 of 15) intron (NM_001195800, intron 3 of 15) -10579 NR_106946 102465534 NR_106946 ENSG00000284553 MIR6886 hsa-mir-6886 microRNA 6886 ncRNA chr12-2099 chr12 50825518 50825728 + 7.54 0.000 Intergenic Intergenic -17303 NM_182559 283471 Hs.125571 NM_182559 ENSG00000186452 TMPRSS12 CT151 transmembrane serine protease 12 protein-coding chr5-2737 chr5 134834339 134834549 + 7.54 0.000 Intergenic Intergenic -11236 NM_152409 134553 Hs.708536 NM_152409 ENSG00000181904 C5orf24 - chromosome 5 open reading frame 24 protein-coding chr1-7852 chr1 86826471 86826681 + 7.54 0.000 Intergenic L2c|LINE|L2 87550 NM_004261 9403 Hs.362728 NM_004261 ENSG00000183291 SELENOF SEP15 selenoprotein F protein-coding chr10-6605 chr10 89805943 89806153 + 7.54 0.000 Intergenic Intergenic -23445 NR_038382 643529 Hs.618956 NR_038382 ENSG00000232229 LINC00865 - long intergenic non-protein coding RNA 865 ncRNA chr14-2433 chr14 71809175 71809385 + 7.54 0.000 Intergenic L1PA6|LINE|L1 -122891 NM_001204423 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr6-5247 chr6 136426350 136426560 + 7.54 0.000 intron (NM_001198617, intron 1 of 15) intron (NM_001198617, intron 1 of 15) 40420 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr2-8893 chr2 178349995 178350205 + 7.54 0.000 intron (NM_001201480, intron 13 of 25) MLT1H1|LTR|ERVL-MaLR 29858 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr3-7774 chr3 71976249 71976459 + 7.54 0.000 Intergenic MER20B|DNA|hAT-Charlie 124101 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr8-5834 chr8 5625441 5625651 + 7.54 0.000 Intergenic Intergenic -630632 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr4-7157 chr4 38868930 38869140 + 7.54 0.000 TTS (NR_030300) TTS (NR_030300) 1003 NR_030300 693159 NR_030300 ENSG00000207944 MIR574 MIR574-3p|MIRN574|hsa-mir-574|mir-574 microRNA 574 ncRNA chr19-4192 chr19 43717274 43717484 + 7.54 0.000 intron (NM_019612, intron 1 of 1) intron (NM_019612, intron 1 of 1) 1303 NM_019612 56269 Hs.515444 NM_019612 ENSG00000124449 IRGC CINEMA|IFGGE|IRGC1|Iigp5|R30953_1 immunity related GTPase cinema protein-coding chr16-6299 chr16 46899327 46899537 + 7.54 0.000 intron (NM_001142466, intron 3 of 11) intron (NM_001142466, intron 3 of 11) -12958 NR_145840 109623466 NR_145840 SNORD148 - small nucleolar RNA, C/D box 148 snoRNA chr10-8724 chr10 103178701 103178911 + 7.54 0.000 intron (NM_001351194, intron 1 of 17) AluSc8|SINE|Alu -1749 NM_001351179 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr14-5118 chr14 89351916 89352126 + 7.54 0.000 intron (NM_001085471, intron 2 of 6) intron (NM_001085471, intron 2 of 6) 65212 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr11-7209 chr11 134087638 134087848 + 7.54 0.000 intron (NM_001205329, intron 1 of 7) intron (NM_001205329, intron 1 of 7) 18671 NM_032801 83700 Hs.150718 NM_032801 ENSG00000166086 JAM3 JAM-2|JAM-3|JAM-C|JAMC junctional adhesion molecule 3 protein-coding chr19-4968 chr19 45516348 45516558 + 7.54 0.000 intron (NM_003370, intron 1 of 12) intron (NM_003370, intron 1 of 12) 8974 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr19-6591 chr19 27842077 27842287 + 7.54 0.000 intron (NR_146734, intron 1 of 7) ERVL-int|LTR|ERVL -48242 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr2-13129 chr2 117145560 117145770 + 7.54 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -669026 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chrX-4366 chrX 49644897 49645107 + 7.54 0.000 Intergenic MER52A|LTR|ERV1 45989 NR_102272 2543 Hs.278606 NM_001468 ENSG00000205777 GAGE1 CT4.1|CT4.4|GAGE-1|GAGE-4|GAGE4 G antigen 1 protein-coding chr17-5569 chr17 45006860 45007070 + 7.54 0.000 Intergenic Intergenic -38662 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr9-7433 chr9 24644351 24644561 + 7.54 0.000 Intergenic L1PA4|LINE|L1 -98559 NM_001365008 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr17-3871 chr17 48688717 48688927 + 7.54 0.000 Intergenic AluSx|SINE|Alu 33696 NM_032391 84366 Hs.116467 NM_032391 ENSG00000159182 PRAC1 C17orf92|PRAC PRAC1 small nuclear protein protein-coding chr17-4808 chr17 50599027 50599237 + 7.54 0.000 intron (NR_046058, intron 15 of 33) L1MA7|LINE|L1 -35749 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr15-4681 chr15 65321468 65321678 + 7.54 0.000 Intergenic Intergenic 16896 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr7-4443 chr7 125599506 125599716 + 7.54 0.000 Intergenic MER21B|LTR|ERVL -335320 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr5-5883 chr5 13313582 13313792 + 7.54 0.000 Intergenic L1PA8|LINE|L1 -280801 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr2-6300 chr2 63679266 63679476 + 7.54 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 90220 NM_001199112 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chr15-4250 chr15 33680710 33680920 + 7.54 0.000 intron (NM_001243996, intron 38 of 102) intron (NM_001243996, intron 38 of 102) -287682 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr3-2551 chr3 53501065 53501275 + 7.54 0.000 intron (NM_001128840, intron 2 of 47) intron (NM_001128840, intron 2 of 47) 6559 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr16-4299 chr16 27862182 27862392 + 7.54 0.000 intron (NM_001323901, intron 2 of 5) MLT1E1A|LTR|ERVL-MaLR 25870 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chrX-2174 chrX 38749211 38749421 + 7.54 0.000 Intergenic Intergenic -52116 NM_021242 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr1-7084 chr1 187842710 187842920 + 7.54 0.000 Intergenic LTR18A|LTR|ERVL 399187 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr3-6706 chr3 133753108 133753318 + 7.54 0.000 intron (NM_001063, intron 2 of 16) MER76|LTR|ERVL 6820 NM_001063 7018 Hs.518267 NM_001063 ENSG00000091513 TF HEL-S-71p|PRO1557|PRO2086|TFQTL1 transferrin protein-coding chr14-2904 chr14 37961853 37962063 + 7.54 0.000 Intergenic MER5B|DNA|hAT-Charlie -59834 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr20-3685 chr20 13920041 13920251 + 7.54 0.000 intron (NR_073206, intron 3 of 20) AluSz|SINE|Alu 70468 NM_001271539 80343 Hs.590879 NM_025229 ENSG00000101251 SEL1L2 C20orf50|sel-1L2 SEL1L2 adaptor subunit of ERAD E3 ligase protein-coding chr3-6692 chr3 132109430 132109640 + 7.54 0.000 Intergenic L1PA16|LINE|L1 -69929 NM_153429 131034 Hs.199877 NM_130808 ENSG00000196353 CPNE4 COPN4|CPN4 copine 4 protein-coding chr2-10789 chr2 44734994 44735204 + 7.54 0.000 intron (NM_024766, intron 7 of 10) L1MEc|LINE|L1 203789 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr16-6890 chr16 84609707 84609917 + 7.54 0.000 intron (NM_021149, intron 2 of 3) THE1C|LTR|ERVL-MaLR 8266 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr19-3946 chr19 51643472 51643682 + 7.54 0.000 exon (NM_001098612, exon 6 of 7) exon (NM_001098612, exon 6 of 7) 3302 NM_001098612 100049587 Hs.707374 NM_001098612 ENSG00000254415 SIGLEC14 - sialic acid binding Ig like lectin 14 protein-coding chr12-7917 chr12 108479181 108479391 + 7.54 0.000 Intergenic Intergenic -5597 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr14-3248 chr14 76508637 76508847 + 7.54 0.000 Intergenic L2c|LINE|L2 137395 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr8-5672 chr8 119540797 119541007 + 7.54 0.000 Intergenic MIRc|SINE|MIR 52106 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr12-8130 chr12 120388363 120388573 + 7.54 0.000 Intergenic L1ME4b|LINE|L1 -19304 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chr3-9065 chr3 25900841 25901051 + 7.54 0.000 Intergenic L2c|LINE|L2 -27251 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr10-7277 chr10 129363224 129363434 + 7.54 0.000 Intergenic Intergenic -103912 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr19-5224 chr19 36076138 36076348 + 7.54 0.000 intron (NM_001083961, intron 9 of 31) L1MC5|LINE|L1 21346 NM_173636 284403 Hs.116244 NM_173636 ENSG00000075702 WDR62 C19orf14|MCPH2 WD repeat domain 62 protein-coding chr2-6374 chr2 108960980 108961190 + 7.54 0.000 intron (NM_022336, intron 1 of 11) intron (NM_022336, intron 1 of 11) 28135 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr6-3034 chr6 53869967 53870177 + 7.54 0.000 intron (NM_018214, intron 2 of 13) intron (NM_018214, intron 2 of 13) -59910 NR_125842 101927189 Hs.453592 NR_125842 ENSG00000236740 LOC101927189 - uncharacterized LOC101927189 ncRNA chr2-11262 chr2 176380019 176380229 + 7.54 0.000 Intergenic L1ME1|LINE|L1 110682 NM_001006635 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr1-15848 chr1 181202965 181203175 + 7.54 0.000 Intergenic Intergenic 28586 NR_125966 101928973 Hs.637822 NR_125966 ENSG00000237292 LINC01732 - long intergenic non-protein coding RNA 1732 ncRNA chr10-8862 chr10 111996369 111996579 + 7.54 0.000 Intergenic AluY|SINE|Alu 187291 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr4-4282 chr4 25085567 25085777 + 7.54 0.000 Intergenic (GAGGCA)n|Simple_repeat|Simple_repeat -54726 NM_018176 55203 Hs.12488 NM_018176 ENSG00000153012 LGI2 LGIL2 leucine rich repeat LGI family member 2 protein-coding chr6-4895 chr6 91977926 91978136 + 7.54 0.000 Intergenic Intergenic -287603 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr13-2899 chr13 113081195 113081405 + 7.54 0.000 intron (NM_001366646, intron 14 of 27) intron (NM_001366646, intron 14 of 27) -24488 NM_000131 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr1-5197 chr1 177641877 177642087 + 7.54 0.000 Intergenic Intergenic -58542 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr17-8232 chr17 65100064 65100274 + 7.54 0.000 promoter-TSS (NR_110801) promoter-TSS (NR_110801) -643 NR_110801 100507002 Hs.729924 NR_110801 LOC100507002 - uncharacterized LOC100507002 ncRNA chr9-8382 chr9 118403386 118403596 + 7.54 0.000 Intergenic Intergenic -276180 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr16-5995 chr16 6301760 6301970 + 7.54 0.000 intron (NM_018723, intron 1 of 15) MIRb|SINE|MIR 282162 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr6-8255 chr6 138372832 138373042 + 7.54 0.000 Intergenic Intergenic -4706 NM_001368163 110806279 NM_001368163 ENSG00000262543 SMIM28 - small integral membrane protein 28 protein-coding chr8-7019 chr8 110189230 110189440 + 7.54 0.000 Intergenic L1M2|LINE|L1 -213564 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr10-4490 chr10 80699714 80699924 + 7.54 0.000 Intergenic Intergenic 50022 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr12-5740 chr12 125911919 125912129 + 7.54 0.000 Intergenic AluSc|SINE|Alu 71350 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chrX-2822 chrX 136049629 136049839 + 7.54 0.000 Intergenic L2b|LINE|L2 64299 NM_001330652 10479 Hs.62185 NM_006359 ENSG00000198689 SLC9A6 MRSA|NHE6 solute carrier family 9 member A6 protein-coding chr14-2360 chr14 29805773 29805983 + 7.54 0.000 intron (NM_001330069, intron 1 of 18) intron (NM_001330069, intron 1 of 18) 121218 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr22-4107 chr22 43658869 43659079 + 7.54 0.000 intron (NM_198856, intron 15 of 29) intron (NM_198856, intron 15 of 29) 142720 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr16-7033 chr16 88168081 88168291 + 7.54 0.000 Intergenic MER121|DNA|hAT? -26095 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr17-3928 chr17 58310617 58310827 + 7.54 0.000 exon (NM_001261835, exon 20 of 32) exon (NM_001261835, exon 20 of 32) -14728 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr1-7709 chr1 25113287 25113497 + 7.54 0.000 Intergenic Intergenic 89889 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr9-8612 chr9 128565487 128565697 + 7.54 0.000 intron (NM_003127, intron 1 of 55) intron (NM_003127, intron 1 of 55) 13005 NM_001363759 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr17-3199 chr17 82847190 82847400 + 7.54 0.000 intron (NM_005993, intron 13 of 38) AluY|SINE|Alu -7273 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chrX-1891 chrX 133945257 133945467 + 7.54 0.000 intron (NM_001164619, intron 1 of 6) AluJb|SINE|Alu 40232 NM_001164619 2719 Hs.644108 NM_004484 ENSG00000147257 GPC3 DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1 glypican 3 protein-coding chr3-9649 chr3 60634103 60634313 + 7.54 0.000 intron (NM_001320900, intron 5 of 9) intron (NM_001320900, intron 5 of 9) -16338 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chrX-1223 chrX 78620050 78620260 + 7.54 0.000 Intergenic L1MA3|LINE|L1 39173 NM_152694 203430 Hs.134873 NM_152694 ENSG00000179300 RTL3 Mar3|Mart3|SIRH9|ZCCHC5|ZHC5 retrotransposon Gag like 3 protein-coding chr8-6721 chr8 86703405 86703615 + 7.54 0.000 intron (NM_019098, intron 3 of 17) intron (NM_019098, intron 3 of 17) 40165 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding chr13-4124 chr13 81713706 81713916 + 7.54 0.000 Intergenic L1P4a|LINE|L1 -486828 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr6-7602 chr6 76419749 76419959 + 7.54 0.000 Intergenic Intergenic 173769 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr1-11071 chr1 226963177 226963387 + 7.54 0.000 intron (NM_020247, intron 2 of 14) intron (NM_020247, intron 2 of 14) 22988 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr5-5680 chr5 160357545 160357755 + 7.54 0.000 intron (NM_001366504, intron 1 of 3) intron (NM_001366504, intron 1 of 3) 12976 NM_031908 114898 Hs.110062 NM_031908 ENSG00000145861 C1QTNF2 CTRP2|zacrp2 C1q and TNF related 2 protein-coding chr11-8702 chr11 5892865 5893075 + 7.54 0.000 Intergenic Intergenic -7795 NM_001005166 390082 NM_001005166 ENSG00000277932 OR52E5 OR11-56 olfactory receptor family 52 subfamily E member 5 protein-coding chr12-4116 chr12 64099243 64099453 + 7.54 0.000 intron (NM_001346201, intron 15 of 21) intron (NM_001346201, intron 15 of 21) 122948 NM_152440 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr13-2322 chr13 32938441 32938651 + 7.54 0.000 Intergenic L1M4|LINE|L1 -26894 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr4-6182 chr4 42895853 42896063 + 7.54 0.000 intron (NM_001080476, intron 1 of 3) intron (NM_001080476, intron 1 of 3) 2692 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chrX-969 chrX 124736918 124737128 + 7.54 0.000 exon (NM_001163279, exon 4 of 32) exon (NM_001163279, exon 4 of 32) 226794 NM_001163279 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr18-994 chr18 25952354 25952564 + 7.54 0.000 Intergenic Intergenic 138154 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr9-5111 chr9 35780172 35780382 + 7.54 0.000 Intergenic LTR78B|LTR|ERV1 -12132 NM_003995 4882 Hs.78518 NM_000907 ENSG00000159899 NPR2 AMDM|ANPRB|ANPb|ECDM|GUC2B|GUCY2B|NPRB|NPRBi|SNSK natriuretic peptide receptor 2 protein-coding chr9-6748 chr9 16763387 16763597 + 7.54 0.000 intron (NM_017637, intron 1 of 6) AluJb|SINE|Alu 36678 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr3-5637 chr3 10934362 10934572 + 7.54 0.000 intron (NM_014229, intron 12 of 13) intron (NM_014229, intron 12 of 13) -58267 NM_001348250 6529 Hs.443874 NM_003042 ENSG00000157103 SLC6A1 GABATHG|GABATR|GAT1|MAE solute carrier family 6 member 1 protein-coding chrX-2102 chrX 24467895 24468105 + 7.54 0.000 intron (NM_001142386, intron 1 of 11) intron (NM_001142386, intron 1 of 11) 2714 NM_001142386 5165 Hs.296031 NM_005391 ENSG00000067992 PDK3 CMTX6|GS1-358P8.4 pyruvate dehydrogenase kinase 3 protein-coding chr11-7843 chr11 114566039 114566249 + 7.54 0.000 Intergenic L2a|LINE|L2 -6263 NM_152315 120400 Hs.550126 NM_152315 ENSG00000095110 NXPE1 FAM55A neurexophilin and PC-esterase domain family member 1 protein-coding chr1-15965 chr1 192232864 192233074 + 7.54 0.000 Intergenic Intergenic 74507 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr6-7879 chr6 107345395 107345605 + 7.54 0.000 intron (NM_020381, intron 1 of 7) intron (NM_020381, intron 1 of 7) 114064 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chrX-2401 chrX 72679910 72680120 + 7.54 0.000 intron (NM_002637, intron 5 of 31) AluSp|SINE|Alu -8934 NR_110391 101928259 Hs.666679 NR_110391 ENSG00000231944 PHKA1-AS1 - PHKA1 antisense RNA 1 ncRNA chr1-7241 chr1 226255462 226255672 + 7.54 0.000 intron (NM_001366239, intron 9 of 13) L1MCa|LINE|L1 31903 NM_001282402 83881 Hs.282079 NM_031944 ENSG00000185155 MIXL1 MILD1|MIX|MIXL Mix paired-like homeobox protein-coding chr8-2347 chr8 23605831 23606041 + 7.54 0.000 Intergenic Intergenic 76953 NM_001256339 4824 Hs.55999 NM_006167 ENSG00000167034 NKX3-1 BAPX2|NKX3|NKX3.1|NKX3A NK3 homeobox 1 protein-coding chr4-4858 chr4 112717838 112718048 + 7.54 0.000 intron (NM_001354269, intron 1 of 43) intron (NM_001354269, intron 1 of 43) 11925 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr6-4237 chr6 6260217 6260427 + 7.54 0.000 intron (NM_000129, intron 4 of 14) intron (NM_000129, intron 4 of 14) 60369 NM_000129 2162 Hs.335513 NM_000129 ENSG00000124491 F13A1 F13A coagulation factor XIII A chain protein-coding chr9-3607 chr9 86487405 86487615 + 7.54 0.000 Intergenic Intergenic -133100 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr14-2678 chr14 76007895 76008105 + 7.54 0.000 intron (NM_001102564, intron 2 of 8) intron (NM_001102564, intron 2 of 8) 22237 NM_001255995 112752 Hs.532626 NM_052873 ENSG00000119650 IFT43 C14orf179|CED3|RP81|SRTD18 intraflagellar transport 43 protein-coding chr14-3391 chr14 95248682 95248892 + 7.54 0.000 intron (NM_024734, intron 1 of 12) intron (NM_024734, intron 1 of 12) 71121 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr7-8916 chr7 94764806 94765016 + 7.54 0.000 Intergenic Intergenic 108541 NM_001184962 23089 Hs.147492 NM_015068 ENSG00000242265 PEG10 EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1 paternally expressed 10 protein-coding chr12-4628 chr12 42219357 42219567 + 7.54 0.000 intron (NR_135140, intron 2 of 6) intron (NR_135140, intron 2 of 6) 18906 NR_135140 10138 Hs.649195 NM_005748 ENSG00000015153 YAF2 - YY1 associated factor 2 protein-coding chrX-4224 chrX 38151353 38151563 + 7.54 0.000 intron (NM_001170752, intron 8 of 8) intron (NM_001170752, intron 8 of 8) 69413 NM_006307 8406 Hs.15154 NM_006307 ENSG00000101955 SRPX DRS|ETX1|HEL-S-83p|SRPX1 sushi repeat containing protein X-linked protein-coding chr6-7735 chr6 90529106 90529316 + 7.54 0.000 intron (NM_145331, intron 13 of 16) intron (NM_145331, intron 13 of 16) 57861 NM_145332 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr17-6073 chr17 80096894 80097104 + 7.54 0.000 intron (NM_017950, intron 18 of 19) intron (NM_017950, intron 18 of 19) -1829 NR_039607 100616121 NR_039607 ENSG00000265561 MIR1268B - microRNA 1268b ncRNA chr11-9303 chr11 45437415 45437625 + 7.54 0.000 Intergenic Intergenic 66123 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr2-14749 chr2 239910848 239911058 + 7.54 0.000 intron (NR_136158, intron 9 of 10) MamGypLTR3a|LTR|Gypsy 32141 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr2-4987 chr2 209248740 209248950 + 7.54 0.000 Intergenic L1MA3|LINE|L1 -175202 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr4-3899 chr4 146332067 146332277 + 7.54 0.000 intron (NM_001317816, intron 4 of 10) intron (NM_001317816, intron 4 of 10) -76411 NR_107003 102465837 NR_107003 ENSG00000278438 MIR7849 hsa-mir-7849 microRNA 7849 ncRNA chr10-6151 chr10 235974 236184 + 7.54 0.000 intron (NM_001370102, intron 4 of 14) intron (NM_001370102, intron 4 of 14) 56085 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr11-8699 chr11 5737983 5738193 + 7.54 0.000 3' UTR (NM_001005180, exon 1 of 1) 3' UTR (NM_001005180, exon 1 of 1) 1640 NM_001005180 387748 Hs.689609 NM_001005180 ENSG00000181023 OR56B1 OR11-65|OR56B1P olfactory receptor family 56 subfamily B member 1 protein-coding chr4-6151 chr4 34335727 34335937 + 7.54 0.000 Intergenic LTR12C|LTR|ERV1 -66085 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr2-12799 chr2 88226768 88226978 + 7.54 0.000 Intergenic MIRb|SINE|MIR 53734 NM_018271 55258 Hs.739080 NM_018271 ENSG00000144115 THNSL2 SOFAT|THS2|TSH2 threonine synthase like 2 protein-coding chr15-4009 chr15 57371436 57371646 + 7.54 0.000 Intergenic Intergenic -4964 NM_032866 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr3-9901 chr3 84472117 84472327 + 7.54 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 397353 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA KI270772.1-1 KI270772.1 42578 42788 + 7.54 0.000 NA NA NA NA chr7-7212 chr7 20479186 20479396 + 7.54 0.000 Intergenic Intergenic -136376 NM_001163941 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding chr8-2311 chr8 142739338 142739548 + 7.54 0.000 Intergenic CpG 2963 NM_020427 57152 Hs.103505 NM_020427 ENSG00000126233 SLURP1 ANUP|ARS|ArsB|LY6-MT|LY6LS|MDM secreted LY6/PLAUR domain containing 1 protein-coding chr21-1462 chr21 33405017 33405227 + 7.54 0.000 intron (NM_005534, intron 1 of 6) AluSg|SINE|Alu 2226 NM_005534 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr1-8972 chr1 9648547 9648757 + 7.54 0.000 Intergenic Intergenic -3079 NM_005026 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr9-4221 chr9 72597001 72597211 + 7.54 0.000 intron (NM_138691, intron 2 of 23) MamGypsy2-I|LTR|Gypsy 75305 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr12-6676 chr12 3049849 3050059 + 7.54 0.000 Intergenic HAL1|LINE|L1 -27401 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr18-3255 chr18 49959129 49959339 + 7.54 0.000 intron (NM_001080467, intron 12 of 39) intron (NM_001080467, intron 12 of 39) 145211 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr6-2722 chr6 54678862 54679072 + 7.54 0.000 Intergenic MIRc|SINE|MIR -167804 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr5-4973 chr5 79170027 79170237 + 7.54 0.000 Intergenic Intergenic 58323 NM_001713 635 Hs.80756 NM_001713 ENSG00000145692 BHMT BHMT1|HEL-S-61p betaine--homocysteine S-methyltransferase protein-coding chr10-3541 chr10 75387912 75388122 + 7.54 0.000 intron (NR_120651, intron 1 of 3) intron (NR_120651, intron 1 of 3) -13511 NR_024421 100131213 Hs.534598 NR_024421 ENSG00000237149 ZNF503-AS2 C10orf41|NCRNA00245 ZNF503 antisense RNA 2 ncRNA chr18-2969 chr18 22799025 22799235 + 7.54 0.000 Intergenic Intergenic -12293 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr2-13642 chr2 160372551 160372761 + 7.54 0.000 intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) 35226 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr1-15147 chr1 104779502 104779712 + 7.54 0.000 Intergenic Intergenic 706584 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo chr2-8726 chr2 158723617 158723827 + 7.54 0.000 intron (NR_135242, intron 1 of 3) intron (NR_135242, intron 1 of 3) 11280 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr8-5529 chr8 66962742 66962952 + 7.54 0.000 promoter-TSS (NM_001193502) promoter-TSS (NM_001193502) -256 NM_001193502 100129654 Hs.120040 NM_001193502 ENSG00000261787 TCF24 TCF-24|bHLHa25 transcription factor 24 protein-coding chr18-2210 chr18 63828278 63828488 + 7.54 0.000 Intergenic MSTA|LTR|ERVL-MaLR 50606 NM_001261830 8710 Hs.138202 NM_003784 ENSG00000166396 SERPINB7 MEGSIN|PPKN|TP55 serpin family B member 7 protein-coding chr7-9574 chr7 146136334 146136544 + 7.54 0.000 Intergenic Intergenic -637832 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr13-3285 chr13 45395829 45396039 + 7.54 0.000 3' UTR (NM_001286806, exon 9 of 9) 3' UTR (NM_001286806, exon 9 of 9) -22228 NR_047031 100874259 Hs.658038 NR_047031 ENSG00000251015 SLC25A30-AS1 - SLC25A30 antisense RNA 1 ncRNA chr2-7248 chr2 228512948 228513158 + 7.54 0.000 intron (NR_151716, intron 1 of 3) AluJr|SINE|Alu 98342 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr2-10952 chr2 84377251 84377461 + 7.54 0.000 Intergenic Intergenic 81924 NM_003849 8802 Hs.270428 NM_003849 ENSG00000163541 SUCLG1 GALPHA|MTDPS9|SUCLA1 succinate-CoA ligase alpha subunit protein-coding chr10-5645 chr10 97116712 97116922 + 7.54 0.000 intron (NM_003061, intron 4 of 36) intron (NM_003061, intron 4 of 36) 14061 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr18-3414 chr18 62982869 62983079 + 7.54 0.000 Intergenic Intergenic 267433 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr9-7983 chr9 92940550 92940760 + 7.54 0.000 Intergenic Intergenic -6868 NM_001083536 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr9-3644 chr9 93021388 93021598 + 7.54 0.000 intron (NM_001369952, intron 12 of 16) intron (NM_001369952, intron 12 of 16) -6549 NR_121565 101927954 Hs.673794 NR_121565 LOC101927954 - uncharacterized LOC101927954 ncRNA chr19-6467 chr19 17141322 17141532 + 7.54 0.000 intron (NM_001130065, intron 2 of 39) intron (NM_001130065, intron 2 of 39) 49192 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chr3-7109 chr3 182570384 182570594 + 7.54 0.000 Intergenic L2a|LINE|L2 -63365 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr22-2640 chr22 33824878 33825088 + 7.54 0.000 intron (NM_001362953, intron 1 of 14) MIR3|SINE|MIR 95445 NM_004737 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr10-3867 chr10 33047695 33047905 + 7.54 0.000 Intergenic LTR49|LTR|ERV1 69007 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr12-5947 chr12 79292953 79293163 + 7.54 0.000 intron (NM_001291901, intron 5 of 9) AluYm1|SINE|Alu -126199 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr5-8907 chr5 156892198 156892408 + 7.54 0.000 Intergenic Intergenic 42008 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr3-8259 chr3 50873333 50873543 + 7.42 0.000 intron (NM_004947, intron 3 of 52) L1MA2|LINE|L1 198358 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr22-2562 chr22 27358310 27358520 + 7.42 0.000 Intergenic Intergenic 47764 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr10-7823 chr10 43360709 43360919 + 7.42 0.000 Intergenic AluSc|SINE|Alu -10822 NM_173160 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr2-9624 chr2 8656238 8656448 + 7.42 0.000 Intergenic Intergenic 25518 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr13-1391 chr13 113108603 113108813 + 7.42 0.000 intron (NM_000131, intron 2 of 8) CpG 2917 NR_051961 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr4-4278 chr4 24594754 24594964 + 7.42 0.000 Intergenic AluJb|SINE|Alu -10305 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr12-4982 chr12 77631899 77632109 + 7.42 0.000 Intergenic Intergenic -198890 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr3-10704 chr3 152652429 152652639 + 7.42 0.000 Intergenic L2|LINE|L2 -182597 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr7-5100 chr7 2820551 2820761 + 7.42 0.000 intron (NM_001293092, intron 1 of 2) intron (NM_001293092, intron 1 of 2) -5426 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr2-10276 chr2 127582993 127583203 + 7.42 0.000 intron (NM_001080527, intron 12 of 46) intron (NM_001080527, intron 12 of 46) -12136 NR_132317 105373609 Hs.677195 NR_132317 LOC105373609 - uncharacterized LOC105373609 ncRNA chr5-7707 chr5 57450403 57450613 + 7.42 0.000 Intergenic Intergenic 32303 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr12-7635 chr12 81200680 81200890 + 7.42 0.000 intron (NM_024560, intron 9 of 15) AluSz|SINE|Alu 42397 NR_039848 100616133 NR_039848 ENSG00000265227 MIR4699 - microRNA 4699 ncRNA chr1-13980 chr1 25195125 25195335 + 7.42 0.000 Intergenic MIR|SINE|MIR 37272 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr9-5000 chr9 22770648 22770858 + 7.42 0.000 intron (NR_038977, intron 4 of 5) intron (NR_038977, intron 4 of 5) 124553 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chrX-1446 chrX 71000951 71001161 + 7.42 0.000 Intergenic L2c|LINE|L2 67278 NM_013346 29934 Hs.260750 NM_013346 ENSG00000147164 SNX12 - sorting nexin 12 protein-coding chr18-1491 chr18 70721351 70721561 + 7.42 0.000 Intergenic Intergenic -70502 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr19-6593 chr19 27923004 27923214 + 7.42 0.000 intron (NR_146733, intron 2 of 6) intron (NR_146733, intron 2 of 6) -129169 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr6-4119 chr6 157602513 157602723 + 7.42 0.000 intron (NM_024630, intron 3 of 8) intron (NM_024630, intron 3 of 8) 73486 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr6-3594 chr6 84652445 84652655 + 7.42 0.000 Intergenic Intergenic -36908 NR_125875 102724201 Hs.667523 NR_125875 ENSG00000228290 TBX18-AS1 - TBX18 antisense RNA 1 ncRNA chr5-3585 chr5 86842427 86842637 + 7.42 0.000 Intergenic Intergenic 95714 NR_105017 100505878 Hs.246405 NR_105017 LINC02059 - long intergenic non-protein coding RNA 2059 ncRNA chr16-6205 chr16 27825311 27825521 + 7.42 0.000 intron (NM_001323900, intron 5 of 7) AluJr4|SINE|Alu 62741 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr4-8152 chr4 128789498 128789708 + 7.42 0.000 Intergenic L2c|LINE|L2 -20097 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr15-2713 chr15 90266266 90266476 + 7.42 0.000 promoter-TSS (NR_102428) promoter-TSS (NR_102428) -612 NR_102428 10519 Hs.715556 NM_006384 ENSG00000185043 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 protein-coding chr14-2230 chr14 104633315 104633525 + 7.42 0.000 Intergenic Intergenic -28648 NM_001286389 388021 Hs.652298 NM_207379 ENSG00000258986 TMEM179 C14orf90|TMEM179A transmembrane protein 179 protein-coding chr11-5325 chr11 58118309 58118519 + 7.42 0.000 TTS (NM_001005211) TTS (NM_001005211) 1030 NM_001005211 219954 Hs.632122 NM_001005211 ENSG00000172377 OR9I1 OR11-228 olfactory receptor family 9 subfamily I member 1 protein-coding chr19-2778 chr19 45140145 45140355 + 7.42 0.000 exon (NM_019121, exon 3 of 13) exon (NM_019121, exon 3 of 13) 19900 NM_198478 284353 Hs.299256 NM_198478 NKPD1 - NTPase KAP family P-loop domain containing 1 protein-coding chr11-10764 chr11 134744515 134744725 + 7.42 0.000 intron (NR_147836, intron 1 of 1) intron (NR_147836, intron 1 of 1) 8675 NR_147836 729305 Hs.148365 NR_147836 ENSG00000251226 LINC02714 - long intergenic non-protein coding RNA 2714 ncRNA chr3-5808 chr3 28776307 28776517 + 7.42 0.000 Intergenic LTR85b|LTR|Gypsy? 201134 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr4-4816 chr4 107496167 107496377 + 7.42 0.000 Intergenic L1M3b|LINE|L1 223962 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr17-6715 chr17 80553107 80553317 + 7.42 0.000 intron (NM_020761, intron 1 of 33) Charlie1|DNA|hAT-Charlie 8374 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr5-6731 chr5 75461258 75461468 + 7.42 0.000 intron (NM_031361, intron 2 of 16) MER1B|DNA|hAT-Charlie 50266 NM_031361 10087 Hs.270437 NM_005713 ENSG00000113163 CERT1 CERT|CERTL|COL4A3BP|GPBP|MRD34|STARD11 ceramide transporter 1 protein-coding chr22-1745 chr22 23579125 23579335 + 7.42 0.000 intron (NM_001369906, intron 1 of 2) intron (NM_001369906, intron 1 of 2) 1060 NM_001369906 3543 Hs.348935 NM_020070 ENSG00000128322 IGLL1 14.1|AGM2|CD179b|IGL1|IGL5|IGLJ14.1|IGLL|IGO|IGVPB|VPREB2 immunoglobulin lambda like polypeptide 1 protein-coding chr4-8180 chr4 131434933 131435143 + 7.42 0.000 Intergenic THE1D|LTR|ERVL-MaLR -329800 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr2-13516 chr2 150888050 150888260 + 7.42 0.000 Intergenic Intergenic 259258 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr5-7453 chr5 31882294 31882504 + 7.42 0.000 intron (NM_178140, intron 2 of 24) intron (NM_178140, intron 2 of 24) 53760 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr10-2690 chr10 101263244 101263454 + 7.42 0.000 non-coding (NR_120621, exon 1 of 3) non-coding (NR_120621, exon 1 of 3) 201 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr17-8280 chr17 67854310 67854520 + 7.42 0.000 exon (NM_004459, exon 2 of 30) exon (NM_004459, exon 2 of 30) 28912 NM_004459 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr3-4069 chr3 88332559 88332769 + 7.42 0.000 Intergenic AluJr4|SINE|Alu -5792 NM_001368165 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr3-8958 chr3 15052845 15053055 + 7.42 0.000 intron (NR_135247, intron 3 of 4) intron (NR_135247, intron 3 of 4) 12365 NM_022497 64432 Hs.657764 NM_022497 ENSG00000131368 MRPS25 MRP-S25|RPMS25 mitochondrial ribosomal protein S25 protein-coding chr6-4824 chr6 82031572 82031782 + 7.42 0.000 intron (NR_149135, intron 3 of 3) intron (NR_149135, intron 3 of 3) 70088 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr10-5180 chr10 59356252 59356462 + 7.42 0.000 intron (NM_001347852, intron 1 of 12) intron (NM_001347852, intron 1 of 12) 6192 NM_198215 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr5-5992 chr5 133389716 133389926 + 7.42 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 37885 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr1-6521 chr1 26227773 26227983 + 7.42 0.000 non-coding (NR_110698, exon 3 of 4) non-coding (NR_110698, exon 3 of 4) 2558 NR_110698 101928303 Hs.375067 NR_110698 ENSG00000236155 LOC101928303 - uncharacterized LOC101928303 ncRNA chr2-7134 chr2 191151233 191151443 + 7.42 0.000 promoter-TSS (NM_003151) promoter-TSS (NM_003151) 258 NM_001243835 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr5-4800 chr5 57488301 57488511 + 7.42 0.000 Intergenic Intergenic -5595 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr6-1926 chr6 43391599 43391809 + 7.42 0.000 Intergenic HERVP71A-int|LTR|ERV1 -22057 NM_014345 24149 Hs.509718 NM_014345 ENSG00000171467 ZNF318 HRIHFB2436|TZF|ZFP318 zinc finger protein 318 protein-coding chr12-7863 chr12 104930712 104930922 + 7.42 0.000 intron (NM_001352172, intron 1 of 10) intron (NM_001352172, intron 1 of 10) 27473 NM_001352172 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr1-9300 chr1 26502128 26502338 + 7.42 0.000 Intergenic AluJr|SINE|Alu -27528 NM_002953 6195 Hs.149957 NM_002953 ENSG00000117676 RPS6KA1 HU-1|MAPKAPK1A|RSK|RSK1|p90Rsk ribosomal protein S6 kinase A1 protein-coding chr4-5987 chr4 183574365 183574575 + 7.42 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 68388 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr9-3254 chr9 16329837 16330047 + 7.42 0.000 Intergenic Intergenic -53629 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr7-7960 chr7 12090169 12090379 + 7.42 0.000 Intergenic LTR18B|LTR|ERVL -121020 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr2-12014 chr2 28444465 28444675 + 7.42 0.000 Intergenic Intergenic -49898 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr7-7887 chr7 6256940 6257150 + 7.42 0.000 intron (NM_001367581, intron 1 of 13) intron (NM_001367581, intron 1 of 13) 15579 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr7-7836 chr7 4383206 4383416 + 7.42 0.000 Intergenic Intergenic -248474 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr22-826 chr22 27554580 27554790 + 7.42 0.000 Intergenic Intergenic 244034 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr4-7204 chr4 41752878 41753088 + 7.42 0.000 Intergenic Intergenic -4013 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding chr4-5594 chr4 185958119 185958329 + 7.42 0.000 Intergenic HAL1|LINE|L1 -1852 NM_001270771 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr9-4982 chr9 19976484 19976694 + 7.42 0.000 Intergenic MSTA|LTR|ERVL-MaLR -189570 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr1-14186 chr1 33615162 33615372 + 7.42 0.000 intron (NM_052896, intron 39 of 69) intron (NM_052896, intron 39 of 69) 142622 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr3-6069 chr3 51697897 51698107 + 7.42 0.000 intron (NR_024012, intron 2 of 3) MIR3|SINE|MIR -9066 NM_001349117 2912 Hs.121510 NM_000839 ENSG00000164082 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate metabotropic receptor 2 protein-coding chr13-3606 chr13 29097768 29097978 + 7.42 0.000 intron (NM_001366651, intron 4 of 14) MLT1A0|LTR|ERVL-MaLR 73416 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr11-9890 chr11 74581289 74581499 + 7.42 0.000 Intergenic Intergenic -11188 NR_046409 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr6-1881 chr6 112253827 112254037 + 7.42 0.000 exon (NM_001105208, exon 2 of 2) exon (NM_001105208, exon 2 of 2) 635 NM_002290 3910 Hs.654572 NM_002290 ENSG00000112769 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin subunit alpha 4 protein-coding chr4-7155 chr4 38785948 38786158 + 7.42 0.000 Intergenic Intergenic -3063 NM_001017388 81793 Hs.120551 NM_030956 ENSG00000174123 TLR10 CD290 toll like receptor 10 protein-coding chr14-2367 chr14 32620610 32620820 + 7.42 0.000 intron (NM_004274, intron 7 of 13) L1PB3|LINE|L1 291417 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr10-4850 chr10 14356885 14357095 + 7.42 0.000 Intergenic Intergenic -26066 NM_018027 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr2-13845 chr2 177056539 177056749 + 7.42 0.000 Intergenic LFSINE_Vert|SINE|tRNA 155767 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr15-3985 chr15 49288669 49288879 + 7.42 0.000 intron (NM_001289030, intron 8 of 10) intron (NM_001289030, intron 8 of 10) 118527 NM_002044 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr21-738 chr21 38083909 38084119 + 7.42 0.000 intron (NR_147130, intron 2 of 2) intron (NR_147130, intron 2 of 2) 37346 NR_147130 10281 Hs.23251 NM_005867 ENSG00000184029 DSCR4 DCRB|DSCRB Down syndrome critical region 4 ncRNA chrX-2202 chrX 41010441 41010651 + 7.42 0.000 Intergenic LTR33C|LTR|ERVL -74899 NM_001039590 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr5-8750 chr5 146849888 146850098 + 7.42 0.000 intron (NM_001271899, intron 2 of 9) intron (NM_001271899, intron 2 of 9) 28792 NM_001271948 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr14-1323 chr14 71320383 71320593 + 7.42 0.000 promoter-TSS (NM_001354287) promoter-TSS (NM_001354287) 12 NM_001354285 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr5-8201 chr5 107043624 107043834 + 7.42 0.000 Intergenic Intergenic -32715 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr2-6765 chr2 43854555 43854765 + 7.42 0.000 intron (NM_001357321, intron 6 of 12) GA-rich|Low_complexity|Low_complexity 15689 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr9-6930 chr9 95546399 95546609 + 7.42 0.000 Intergenic Intergenic -29447 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr12-5640 chr12 68795021 68795231 + 7.42 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 10368 NR_073494 100130075 Hs.744781 NR_073494 LOC100130075 - SUZ RNA binding domain containing 1 pseudogene pseudo chr17-7048 chr17 62125585 62125795 + 7.42 0.000 Intergenic Intergenic -60412 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr10-2723 chr10 110148073 110148283 + 7.42 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -59427 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr8-5188 chr8 103009571 103009781 + 7.42 0.000 Intergenic Intergenic -11407 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr14-2171 chr14 92504119 92504329 + 7.42 0.000 Intergenic Intergenic -9557 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr1-16251 chr1 211503554 211503764 + 7.42 0.000 Intergenic Intergenic -10742 NM_183059 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr8-5037 chr8 23115171 23115381 + 7.42 0.000 intron (NM_003841, intron 3 of 4) intron (NM_003841, intron 3 of 4) 12462 NM_003841 8794 Hs.655801 NM_003841 ENSG00000173535 TNFRSF10C CD263|DCR1|DCR1-TNFR|LIT|TRAIL-R3|TRAILR3|TRID TNF receptor superfamily member 10c protein-coding chr15-3589 chr15 53899694 53899904 + 7.42 0.000 Intergenic AluSp|SINE|Alu -78642 NM_001329919 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr4-5306 chr4 178621976 178622186 + 7.42 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -714145 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr13-3956 chr13 61465214 61465424 + 7.42 0.000 Intergenic L2|LINE|L2 -37373 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr4-3422 chr4 75630767 75630977 + 7.42 0.000 promoter-TSS (NM_001330724) promoter-TSS (NM_001330724) -344 NM_003948 8999 Hs.591698 NM_003948 ENSG00000138769 CDKL2 KKIAMRE|P56 cyclin dependent kinase like 2 protein-coding chr19-3403 chr19 15993230 15993440 + 7.42 0.000 Intergenic Intergenic -22299 NR_026828 126536 Hs.131824 NR_026828 ENSG00000205396 LINC00661 - long intergenic non-protein coding RNA 661 ncRNA chr16-6236 chr16 29228142 29228352 + 7.42 0.000 Intergenic MIRb|SINE|MIR -74040 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr17-1398 chr17 43832687 43832897 + 7.42 0.000 non-coding (NR_003562, exon 2 of 19) non-coding (NR_003562, exon 2 of 19) 402 NR_148343 4356 Hs.396566 NM_001932 ENSG00000161647 MPP3 DLG3 membrane palmitoylated protein 3 protein-coding chr1-14952 chr1 87637994 87638204 + 7.42 0.000 Intergenic MER66B|LTR|ERV1 -266444 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr22-2059 chr22 45963946 45964156 + 7.42 0.000 intron (NM_058238, intron 1 of 3) intron (NM_058238, intron 1 of 3) 13111 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr2-13856 chr2 177752090 177752300 + 7.42 0.000 intron (NM_001077197, intron 11 of 20) intron (NM_001077197, intron 11 of 20) 78873 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA chr2-9858 chr2 182345589 182345799 + 7.42 0.000 intron (NM_005019, intron 1 of 14) L2a|LINE|L2 81354 NM_001363871 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr1-7344 chr1 9612478 9612688 + 7.42 0.000 intron (NM_001130924, intron 10 of 10) intron (NM_001130924, intron 10 of 10) 23672 NM_001130924 199953 Hs.632365 NM_001010866 ENSG00000188807 TMEM201 Ima1|NET5|SAMP1 transmembrane protein 201 protein-coding chr15-5134 chr15 90143437 90143647 + 7.42 0.000 Intergenic Intergenic -40988 NM_002168 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr11-8032 chr11 17055195 17055405 + 7.42 0.000 Intergenic SATR2|Satellite|Satellite 3414 NR_045002 10819 Hs.523504 NR_045002 ENSG00000184669 OR7E14P OR11-5|OR7E151P olfactory receptor family 7 subfamily E member 14 pseudogene pseudo chr3-9160 chr3 33196634 33196844 + 7.42 0.000 intron (NM_015551, intron 3 of 4) MER94|DNA|hAT-Blackjack 22071 NM_015551 26032 Hs.196647 NM_015551 ENSG00000173705 SUSD5 - sushi domain containing 5 protein-coding chr4-4962 chr4 129797529 129797739 + 7.42 0.000 intron (NR_151713, intron 2 of 16) intron (NR_151713, intron 2 of 16) 26015 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr2-5758 chr2 220076776 220076986 + 7.42 0.000 Intergenic Intergenic -170316 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr4-5188 chr4 159070514 159070724 + 7.42 0.000 Intergenic Intergenic -33432 NM_001351724 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr5-5058 chr5 92465598 92465808 + 7.42 0.000 Intergenic Intergenic -1082386 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr19-3878 chr19 33841758 33841968 + 7.42 0.000 Intergenic Intergenic 44993 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr9-5162 chr9 42947193 42947403 + 7.42 0.000 Intergenic HSAT5|Satellite|Satellite 158898 NR_131213 105500239 NR_131213 XLOC_007697 - uncharacterized LOC105500239 ncRNA chr7-9694 chr7 154767220 154767430 + 7.42 0.000 intron (NR_157196, intron 8 of 25) intron (NR_157196, intron 8 of 25) -161192 NR_024476 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr2-3942 chr2 62826307 62826517 + 7.42 0.000 intron (NM_001142615, intron 6 of 22) intron (NM_001142615, intron 6 of 22) 119515 NM_001354217 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr1-15514 chr1 156533213 156533423 + 7.42 0.000 intron (NM_178229, intron 31 of 37) intron (NM_178229, intron 31 of 37) -32543 NM_005920 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr18-1105 chr18 64319391 64319601 + 7.42 0.000 intron (NR_033881, intron 5 of 9) L1MC1|LINE|L1 -59441 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr21-567 chr21 45153618 45153828 + 7.42 0.000 intron (NM_001346687, intron 1 of 11) intron (NM_001346687, intron 1 of 11) 1193 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr10-5724 chr10 101131075 101131285 + 7.42 0.000 promoter-TSS (NR_130722) promoter-TSS (NR_130722) -34 NR_130722 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr11-3051 chr11 8289807 8290017 + 7.42 0.000 Intergenic Intergenic -21125 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr5-7311 chr5 15364046 15364256 + 7.42 0.000 Intergenic Intergenic -97591 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr3-10417 chr3 130709713 130709923 + 7.42 0.000 intron (NM_014602, intron 9 of 19) L1MB7|LINE|L1 37011 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr17-5209 chr17 15983911 15984121 + 7.42 0.000 intron (NM_001042697, intron 3 of 4) intron (NM_001042697, intron 3 of 4) 15688 NM_001042697 125150 Hs.593985 NM_001042697 ENSG00000214941 ZSWIM7 SWS1 zinc finger SWIM-type containing 7 protein-coding chr3-9693 chr3 65178003 65178213 + 7.42 0.000 Intergenic Intergenic -490108 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr10-8344 chr10 79585611 79585821 + 7.42 0.000 Intergenic Intergenic -25223 NM_005411 653509 Hs.535295 NM_005411 ENSG00000122852 SFTPA1 COLEC4|PSAP|PSP-A|PSPA|SFTP1|SFTPA1B|SP-A|SP-A1|SPA|SPA1 surfactant protein A1 protein-coding chr11-6660 chr11 75946762 75946972 + 7.42 0.000 intron (NM_003369, intron 6 of 14) MLT1B|LTR|ERVL-MaLR 131657 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr2-13426 chr2 142488443 142488653 + 7.42 0.000 Intergenic LTR1E|LTR|ERV1 -356847 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr11-9602 chr11 65547692 65547902 + 7.42 0.000 exon (NM_021070, exon 13 of 27) exon (NM_021070, exon 13 of 27) 10431 NM_001130144 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr10-5589 chr10 92464290 92464500 + 7.42 0.000 intron (NR_136399, intron 21 of 25) intron (NR_136399, intron 21 of 25) 33366 NM_001165946 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr20-1955 chr20 33277357 33277567 + 7.42 0.000 Intergenic Intergenic -5752 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr4-1883 chr4 4541908 4542118 + 7.42 0.000 promoter-TSS (NR_144414) promoter-TSS (NR_144414) 35 NM_016930 53407 Hs.584913 NM_016930 ENSG00000168818 STX18 Ufe1 syntaxin 18 protein-coding chr15-5147 chr15 90973622 90973832 + 7.42 0.000 intron (NM_199413, intron 11 of 13) LTR5B|LTR|ERVK 7358 NR_051984 100507118 Hs.366401 NR_051984 ENSG00000258725 PRC1-AS1 - PRC1 antisense RNA 1 ncRNA chr5-7948 chr5 80125929 80126139 + 7.42 0.000 intron (NR_126061, intron 11 of 13) intron (NR_126061, intron 11 of 13) -42369 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr3-10706 chr3 152723656 152723866 + 7.42 0.000 Intergenic L1MEh|LINE|L1 -111370 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr11-10159 chr11 93012172 93012382 + 7.42 0.000 Intergenic Intergenic 42654 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr5-3942 chr5 941866 942076 + 7.42 0.000 Intergenic L1ME3A|LINE|L1 49087 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr18-839 chr18 13584466 13584676 + 7.42 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -26543 NR_039752 100616130 NR_039752 ENSG00000263527 MIR4526 mir-4526 microRNA 4526 ncRNA chr11-9009 chr11 24800361 24800571 + 7.42 0.000 intron (NM_001252010, intron 5 of 9) intron (NM_001252010, intron 5 of 9) 303413 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr4-6830 chr4 8189566 8189776 + 7.42 0.000 Intergenic Intergenic -9619 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr1-9507 chr1 38093853 38094063 + 7.42 0.000 Intergenic L1ME4b|LINE|L1 4727 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr22-2570 chr22 27994109 27994319 + 7.42 0.000 intron (NM_001145418, intron 17 of 22) AluJo|SINE|Alu -73602 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr14-2831 chr14 24971012 24971222 + 7.42 0.000 intron (NM_001351943, intron 3 of 6) intron (NM_001351943, intron 3 of 6) 77883 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr3-3422 chr3 105838653 105838863 + 7.42 0.000 intron (NR_135809, intron 3 of 18) AluSc|SINE|Alu 28833 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr6-8188 chr6 133241707 133241917 + 7.42 0.000 intron (NM_172103, intron 1 of 18) CpG 313 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr12-5658 chr12 83790619 83790829 + 7.42 0.000 Intergenic Intergenic 1103569 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr10-6669 chr10 104926114 104926324 + 7.42 0.000 intron (NM_014978, intron 3 of 26) intron (NM_014978, intron 3 of 26) -260003 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr19-5214 chr19 31293910 31294120 + 7.42 0.000 intron (NM_020856, intron 1 of 1) intron (NM_020856, intron 1 of 1) 55421 NR_138036 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr1-16585 chr1 236243001 236243211 + 7.42 0.000 intron (NM_019891, intron 6 of 15) MIR|SINE|MIR 38852 NM_019891 56605 Hs.558519 NM_019891 ENSG00000086619 ERO1B ERO1LB|Ero1beta endoplasmic reticulum oxidoreductase 1 beta protein-coding chr1-11887 chr1 45212396 45212606 + 7.42 0.000 Intergenic LTR16B2|LTR|ERVL -5896 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr11-7706 chr11 69403907 69404117 + 7.42 0.000 Intergenic L3|LINE|CR1 -21643 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr16-4746 chr16 84678047 84678257 + 7.42 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -21848 NR_073578 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr11-6734 chr11 82225957 82226167 + 7.42 0.000 intron (NR_120571, intron 3 of 7) L1MB1|LINE|L1 177851 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr2-5345 chr2 88600136 88600346 + 7.42 0.000 intron (NM_004836, intron 2 of 16) intron (NM_004836, intron 2 of 16) 24688 NM_001313915 9451 Hs.591589 NM_004836 ENSG00000172071 EIF2AK3 PEK|PERK|WRS eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding chr10-3990 chr10 127032963 127033173 + 7.42 0.000 intron (NM_001290223, intron 18 of 51) MIRb|SINE|MIR 127659 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr5-8671 chr5 140698826 140699036 + 7.42 0.000 3' UTR (NM_001363535, exon 14 of 14) 3' UTR (NM_001363535, exon 14 of 14) -1516 NM_144723 153527 Hs.350194 NM_144723 ENSG00000146007 ZMAT2 Ptg-12|Snu23 zinc finger matrin-type 2 protein-coding chr6-7152 chr6 36604559 36604769 + 7.42 0.000 TTS (NR_036610) TTS (NR_036610) 10302 NM_003017 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr22-3409 chr22 36716792 36717002 + 7.42 0.000 intron (NR_134623, intron 1 of 3) intron (NR_134623, intron 1 of 3) 13021 NR_134623 105373021 Hs.401697 NR_134623 LOC105373021 - uncharacterized LOC105373021 ncRNA chr3-5120 chr3 51711764 51711974 + 7.42 0.000 intron (NM_000839, intron 2 of 5) intron (NM_000839, intron 2 of 5) 4801 NM_001349116 2912 Hs.121510 NM_000839 ENSG00000164082 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate metabotropic receptor 2 protein-coding chr4-3101 chr4 155017454 155017664 + 7.42 0.000 Intergenic LTR85b|LTR|Gypsy? -191077 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr14-5129 chr14 90102791 90103001 + 7.42 0.000 intron (NM_022054, intron 1 of 1) L1PA16|LINE|L1 40902 NM_022054 56659 Hs.510191 NM_022054 ENSG00000152315 KCNK13 K2p13.1|THIK-1|THIK1 potassium two pore domain channel subfamily K member 13 protein-coding chr5-4663 chr5 36828132 36828342 + 7.42 0.000 Intergenic L2|LINE|L2 48457 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA chr22-3724 chr22 25778003 25778213 + 7.42 0.000 intron (NM_001318245, intron 8 of 43) MER91B|DNA|hAT-Tip100 35920 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr16-2122 chr16 3075701 3075911 + 7.42 0.000 Intergenic Intergenic 10022 NM_001012636 9235 Hs.943 NM_004221 ENSG00000008517 IL32 IL-32alpha|IL-32beta|IL-32delta|IL-32gamma|NK4|TAIF|TAIFa|TAIFb|TAIFc|TAIFd interleukin 32 protein-coding chr9-8173 chr9 105976430 105976640 + 7.42 0.000 Intergenic Intergenic 281994 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr3-8940 chr3 14253115 14253325 + 7.42 0.000 Intergenic Intergenic 74403 NM_014463 27258 Hs.111632 NM_014463 ENSG00000170860 LSM3 SMX4|USS2|YLR438C LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr14-2386 chr14 46048218 46048428 + 7.42 0.000 Intergenic L1M1|LINE|L1 -15836 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA chr3-6715 chr3 134886107 134886317 + 7.42 0.000 intron (NM_004441, intron 1 of 15) MIRb|SINE|MIR 90952 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr6-5745 chr6 154127609 154127819 + 7.42 0.000 non-coding (NR_104348, exon 5 of 5) non-coding (NR_104348, exon 5 of 5) 37952 NM_001285528 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr19-6331 chr19 10552674 10552884 + 7.42 0.000 TTS (NR_031603) TTS (NR_031603) 657 NR_031603 100302226 NR_031603 ENSG00000221410 MIR1238 MIRN1238|hsa-mir-1238 microRNA 1238 ncRNA chr7-9553 chr7 141151846 141152056 + 7.42 0.000 intron (NM_001195278, intron 1 of 3) intron (NM_001195278, intron 1 of 3) 77887 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr5-7566 chr5 40136165 40136375 + 7.42 0.000 Intergenic MIRb|SINE|MIR 83979 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr15-3939 chr15 39996921 39997131 + 7.42 0.000 exon (NM_001013703, exon 19 of 39) exon (NM_001013703, exon 19 of 39) 42155 NM_003134 6727 Hs.533732 NM_003134 ENSG00000140319 SRP14 ALURBP signal recognition particle 14 protein-coding chr7-3526 chr7 6498249 6498459 + 7.42 0.000 intron (NM_001145118, intron 20 of 21) intron (NM_001145118, intron 20 of 21) -14202 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr12-5594 chr12 44542110 44542320 + 7.42 0.000 intron (NM_006159, intron 16 of 20) L2|LINE|L2 333446 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr8-4976 chr8 133248884 133249094 + 7.42 0.000 intron (NM_001135242, intron 10 of 15) intron (NM_001135242, intron 10 of 15) 48263 NM_001258432 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr4-5754 chr4 59877873 59878083 + 7.42 0.000 Intergenic AluY|SINE|Alu 864405 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr15-3127 chr15 65819926 65820136 + 7.42 0.000 Intergenic L2c|LINE|L2 -27738 NM_001320835 10260 Hs.654567 NM_005848 ENSG00000174485 DENND4A IRLB|MYCPBP DENN domain containing 4A protein-coding chr4-3930 chr4 162906377 162906587 + 7.42 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 187146 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr2-12820 chr2 94230260 94230470 + 7.42 0.000 Intergenic Intergenic -21946 NR_146108 728034 NR_146105 BMS1P14 - BMS1 pseudogene 14 pseudo chr1-9770 chr1 55716580 55716790 + 7.42 0.000 Intergenic Intergenic 228278 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr17-3881 chr17 49876491 49876701 + 7.42 0.000 Intergenic AluJr|SINE|Alu -28579 NM_001077506 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr15-3591 chr15 54452512 54452722 + 7.42 0.000 intron (NM_001329919, intron 18 of 31) L1MA4A|LINE|L1 439969 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr15-2084 chr15 63412895 63413105 + 7.42 0.000 intron (NR_120375, intron 4 of 6) MER115|DNA|hAT-Tip100 22770 NR_120375 102723344 Hs.569500 NR_120375 LINC02568 - long intergenic non-protein coding RNA 2568 ncRNA chr7-8759 chr7 78383556 78383766 + 7.42 0.000 intron (NM_001301128, intron 6 of 20) L1MA4A|LINE|L1 36419 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr1-11275 chr1 5909986 5910196 + 7.42 0.000 intron (NR_111987, intron 11 of 32) intron (NR_111987, intron 11 of 32) -47350 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr2-5978 chr2 61017939 61018149 + 7.42 0.000 promoter-TSS (NM_001322124) promoter-TSS (NM_001322124) 211 NM_144709 150962 Hs.368348 NM_144709 ENSG00000162927 PUS10 CCDC139|DOBI pseudouridine synthase 10 protein-coding chr3-6899 chr3 156246938 156247148 + 7.42 0.000 intron (NM_003471, intron 1 of 13) MLT1H|LTR|ERVL-MaLR -19160 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr17-7097 chr17 71327832 71328042 + 7.42 0.000 Intergenic Intergenic -125758 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr16-6796 chr16 78792146 78792356 + 7.42 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 692597 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr4-7976 chr4 113308350 113308560 + 7.42 0.000 intron (NM_001354275, intron 24 of 43) L2|LINE|L2 15616 NM_001354279 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr9-6743 chr9 15140943 15141153 + 7.42 0.000 Intergenic Intergenic 109170 NM_001168342 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr3-6507 chr3 113287721 113287931 + 7.42 0.000 TTS (NM_033254) TTS (NM_033254) 75710 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr8-5064 chr8 30565902 30566112 + 7.42 0.000 intron (NM_006867, intron 8 of 9) intron (NM_006867, intron 8 of 9) -72573 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr10-6821 chr10 17683276 17683486 + 7.42 0.000 intron (NM_001324285, intron 3 of 14) AluJb|SINE|Alu 39230 NM_001324282 8027 Hs.335391 NM_003473 ENSG00000136738 STAM STAM-1|STAM1 signal transducing adaptor molecule protein-coding chr5-6827 chr5 108440421 108440631 + 7.42 0.000 Intergenic L1PA7|LINE|L1 -58428 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr11-5585 chr11 108561525 108561735 + 7.42 0.000 intron (NM_015065, intron 1 of 5) intron (NM_015065, intron 1 of 5) -9401 NM_001144763 23086 Hs.28540 NM_015065 ENSG00000110723 EXPH5 SLAC2-B|SLAC2B exophilin 5 protein-coding chr10-6908 chr10 46251767 46251977 + 7.42 0.000 intron (NR_103827, intron 3 of 4) intron (NR_103827, intron 3 of 4) 17736 NR_103827 100996567 Hs.546758 NR_103827 ANTXRLP1 - ANTXR like pseudogene 1 pseudo chr7-8068 chr7 23712940 23713150 + 7.42 0.000 intron (NM_031414, intron 3 of 23) intron (NM_031414, intron 3 of 23) 2826 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr5-8700 chr5 142304876 142305086 + 7.42 0.000 Intergenic Intergenic 13341 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr5-8757 chr5 147255318 147255528 + 7.42 0.000 intron (NM_001112724, intron 2 of 12) HERVIP10FH-int|LTR|ERV1 20397 NM_001112724 202374 Hs.585069 NM_145001 ENSG00000169302 STK32A YANK1 serine/threonine kinase 32A protein-coding chr8-2434 chr8 103208050 103208260 + 7.42 0.000 intron (NM_001364874, intron 2 of 3) intron (NM_001364874, intron 2 of 3) -36015 NR_109954 100499183 Hs.654812 NR_034092 ENSG00000247081 BAALC-AS1 FZD6-DT|lncFZD6 BAALC antisense RNA 1 ncRNA chr1-8296 chr1 43421474 43421684 + 7.42 0.000 intron (NM_015284, intron 11 of 70) intron (NM_015284, intron 11 of 70) -26960 NR_106793 102465440 NR_106793 ENSG00000274975 MIR6735 hsa-mir-6735 microRNA 6735 ncRNA chr19-1456 chr19 34134350 34134560 + 7.42 0.000 Intergenic CpG -38049 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr14-3350 chr14 90369523 90369733 + 7.42 0.000 Intergenic Intergenic -26874 NM_001363669 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAM2|CAM3|CAMB|CAMC|CAMI|CAMIII|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr10-7219 chr10 117700716 117700926 + 7.42 0.000 Intergenic Intergenic -155753 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr17-4498 chr17 68955395 68955605 + 7.42 0.000 promoter-TSS (NM_007168) promoter-TSS (NM_007168) -108 NM_001288985 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chrX-5102 chrX 128091888 128092098 + 7.42 0.000 Intergenic L1MB7|LINE|L1 -39590 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr18-1003 chr18 36756342 36756552 + 7.42 0.000 intron (NM_001281739, intron 21 of 23) intron (NM_001281739, intron 21 of 23) 72555 NM_001330572 25941 Hs.436636 NM_015476 ENSG00000134779 TPGS2 C18orf10|HMFN0601|L17|PGs2 tubulin polyglutamylase complex subunit 2 protein-coding chr4-3586 chr4 2292783 2292993 + 7.42 0.000 intron (NM_020972, intron 8 of 12) L1M5|LINE|L1 -30779 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr14-2593 chr14 52473801 52474011 + 7.42 0.000 intron (NM_001160047, intron 14 of 20) intron (NM_001160047, intron 14 of 20) 78599 NM_020784 57544 Hs.532609 NM_020784 ENSG00000087301 TXNDC16 ERp90|KIAA1344 thioredoxin domain containing 16 protein-coding chr2-11317 chr2 197846968 197847178 + 7.42 0.000 intron (NM_006226, intron 1 of 5) intron (NM_006226, intron 1 of 5) 42480 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr1-10751 chr1 199591961 199592171 + 7.42 0.000 Intergenic Intergenic -435644 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chrX-2853 chrX 140339998 140340208 + 7.42 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 164957 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr8-3847 chr8 31452377 31452587 + 7.42 0.000 Intergenic L1MB7|LINE|L1 -187270 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr3-8281 chr3 53756272 53756482 + 7.42 0.000 intron (NM_001128840, intron 29 of 47) intron (NM_001128840, intron 29 of 47) 90042 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr11-3430 chr11 59080532 59080742 + 7.42 0.000 Intergenic Intergenic -5670 NM_001355566 100287520 NM_001355566 ENSG00000255151 GLYATL1B GLYATL1P3 glycine-N-acyltransferase like 1B protein-coding chr6-4693 chr6 55281905 55282115 + 7.42 0.000 intron (NM_001526, intron 7 of 7) intron (NM_001526, intron 7 of 7) -45459 NM_207410 389400 Hs.526967 NM_207410 ENSG00000187871 GFRAL C6orf144|GRAL|UNQ9356|bA360D14.1 GDNF family receptor alpha like protein-coding chr2-2597 chr2 241637798 241638008 + 7.42 0.000 promoter-TSS (NM_015963) promoter-TSS (NM_015963) 210 NM_013325 23192 Hs.283610 NM_013325 ENSG00000168397 ATG4B APG4B|AUTL1 autophagy related 4B cysteine peptidase protein-coding chr14-1201 chr14 73591904 73592114 + 7.42 0.000 exon (NM_152331, exon 1 of 3) exon (NM_152331, exon 1 of 3) 303 NM_152331 122970 Hs.49433 NM_152331 ENSG00000177465 ACOT4 PTE-Ib|PTE1B|PTE2B acyl-CoA thioesterase 4 protein-coding chr8-4122 chr8 73202380 73202590 + 7.42 0.000 Intergenic MamRep434|DNA|TcMar-Tigger 57017 NM_001243237 100130301 Hs.202296 NM_001243237 ENSG00000274443 C8orf89 - chromosome 8 open reading frame 89 protein-coding chr1-11463 chr1 91322584 91322794 + 7.42 0.000 intron (NM_001017975, intron 23 of 38) intron (NM_001017975, intron 23 of 38) 82148 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr13-1334 chr13 32822688 32822898 + 7.42 0.000 intron (NR_047020, intron 4 of 4) intron (NR_047020, intron 4 of 4) 88859 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr10-3609 chr10 93204705 93204915 + 7.42 0.000 Intergenic Intergenic 130917 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr3-8328 chr3 67927035 67927245 + 7.42 0.000 intron (NR_109992, intron 6 of 6) intron (NR_109992, intron 6 of 6) -64452 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr19-5418 chr19 17426125 17426335 + 7.42 0.000 TTS (NM_138401) TTS (NM_138401) 6183 NM_138401 93343 Hs.515243 NM_138401 ENSG00000141971 MVB12A CFBP|FAM125A multivesicular body subunit 12A protein-coding chr3-11109 chr3 186080957 186081167 + 7.42 0.000 exon (NM_004454, exon 6 of 13) exon (NM_004454, exon 6 of 13) 28027 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chrX-2364 chrX 66696491 66696701 + 7.42 0.000 Intergenic MIRb|SINE|MIR -57298 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chrX-1501 chrX 7253468 7253678 + 7.42 0.000 intron (NM_001320753, intron 2 of 9) intron (NM_001320753, intron 2 of 9) 1100 NM_001320754 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr18-1841 chr18 23177286 23177496 + 7.42 0.000 intron (NM_138375, intron 1 of 9) intron (NM_138375, intron 1 of 9) 21566 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr10-3742 chr10 119275472 119275682 + 7.42 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 68006 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr6-5997 chr6 99863748 99863958 + 7.42 0.000 Intergenic Intergenic -130185 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr10-8824 chr10 109372795 109373005 + 7.42 0.000 Intergenic L1PA5|LINE|L1 550346 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr1-4140 chr1 3329218 3329428 + 7.42 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -125342 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr18-3132 chr18 38676640 38676850 + 7.42 0.000 Intergenic L1PBa|LINE|L1 945430 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr22-3917 chr22 36312073 36312283 + 7.42 0.000 exon (NM_002473, exon 14 of 41) exon (NM_002473, exon 14 of 41) -25271 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr2-3552 chr2 23833996 23834206 + 7.42 0.000 intron (NR_125717, intron 13 of 28) intron (NR_125717, intron 13 of 28) 93022 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr6-6444 chr6 99762558 99762768 + 7.42 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 155889 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chrX-2928 chrX 153392067 153392277 + 7.42 0.000 Intergenic Intergenic 8524 NM_001351294 649238 Hs.112603 NM_001351293 ENSG00000214897 PNMA6E - PNMA family member 6E protein-coding chr9-5283 chr9 82995368 82995578 + 7.42 0.000 intron (NM_152573, intron 14 of 16) AluJb|SINE|Alu 67669 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr8-4945 chr8 110584693 110584903 + 7.42 0.000 Intergenic Intergenic 442635 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr7-3828 chr7 99079213 99079423 + 7.42 0.000 intron (NM_020429, intron 1 of 18) intron (NM_020429, intron 1 of 18) 64790 NM_020429 57154 Hs.189329 NM_020429 ENSG00000198742 SMURF1 - SMAD specific E3 ubiquitin protein ligase 1 protein-coding chr9-4326 chr9 126716276 126716486 + 7.42 0.000 Intergenic AluJb|SINE|Alu -88625 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr8-3529 chr8 119283451 119283661 + 7.42 0.000 Intergenic L2c|LINE|L2 -36699 NR_149114 105375726 Hs.666095 NR_149111 MAL2-AS1 - MAL2 antisense RNA 1 ncRNA chr10-7654 chr10 26110360 26110570 + 7.42 0.000 intron (NM_017433, intron 17 of 34) intron (NM_017433, intron 17 of 34) -105842 NM_000818 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr11-7248 chr11 11909361 11909571 + 7.42 0.000 intron (NM_001282659, intron 8 of 27) A-rich|Low_complexity|Low_complexity 68043 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr2-12222 chr2 43347820 43348030 + 7.42 0.000 intron (NM_001083953, intron 29 of 37) intron (NM_001083953, intron 29 of 37) 120714 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr6-2195 chr6 36964489 36964699 + 7.42 0.000 3' UTR (NM_153370, exon 7 of 7) 3' UTR (NM_153370, exon 7 of 7) 9856 NM_153370 221476 Hs.25391 NM_153370 ENSG00000164530 PI16 CD364|CRISP9|MSMBBP|PSPBP peptidase inhibitor 16 protein-coding chr5-6094 chr5 14915668 14915878 + 7.42 0.000 Intergenic Intergenic -43995 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr3-11054 chr3 183725700 183725910 + 7.42 0.000 intron (NM_001351371, intron 6 of 21) intron (NM_001351371, intron 6 of 21) 15566 NM_001351369 55689 Hs.632575 NM_018023 ENSG00000163872 YEATS2 - YEATS domain containing 2 protein-coding chr3-8699 chr3 186277644 186277854 + 7.42 0.000 intron (NM_001346, intron 9 of 24) intron (NM_001346, intron 9 of 24) 84485 NM_001346 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr19-5519 chr19 48019177 48019387 + 7.42 0.000 intron (NM_022142, intron 4 of 6) MER110A|LTR|ERV1 24650 NM_022142 64100 Hs.104894 NM_022142 ENSG00000169393 ELSPBP1 E12|EDDM12|EL149|HE12 epididymal sperm binding protein 1 protein-coding chr16-7031 chr16 88155920 88156130 + 7.42 0.000 Intergenic L1MB7|LINE|L1 -38256 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chrX-3601 chrX 82346713 82346923 + 7.42 0.000 Intergenic L1MA4A|LINE|L1 1144716 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr17-3300 chr17 57861052 57861262 + 7.42 0.000 TTS (NM_001292025) TTS (NM_001292025) -11113 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr19-3444 chr19 19550554 19550764 + 7.42 0.000 Intergenic Intergenic 12394 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr2-9248 chr2 219238189 219238399 + 7.42 0.000 exon (NM_001286423, exon 14 of 17) exon (NM_001286423, exon 14 of 17) 5337 NM_001286427 79411 Hs.181173 NM_024506 ENSG00000163521 GLB1L - galactosidase beta 1 like protein-coding chr2-9414 chr2 232052673 232052883 + 7.42 0.000 intron (NR_046477, intron 5 of 18) intron (NR_046477, intron 5 of 18) 91065 NR_046476 129563 Hs.732236 NM_152383 ENSG00000144535 DIS3L2 FAM6A|PRLMNS|hDIS3L2 DIS3 like 3'-5' exoribonuclease 2 protein-coding chr10-8271 chr10 75921689 75921899 + 7.42 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 139033 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr9-7635 chr9 39037031 39037241 + 7.42 0.000 Intergenic Intergenic 251167 NM_033655 79937 Hs.128474 NM_033655 ENSG00000106714 CNTNAP3 CASPR3|CNTNAP3A contactin associated protein like 3 protein-coding chr15-1640 chr15 92564678 92564888 + 7.42 0.000 Intergenic MSTB|LTR|ERVL-MaLR 7480 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 - long intergenic non-protein coding RNA 930 ncRNA chr20-2349 chr20 14384558 14384768 + 7.42 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) -46996 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr5-7262 chr5 12500992 12501202 + 7.42 0.000 Intergenic L2c|LINE|L2 -73760 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA chr4-8326 chr4 145553242 145553452 + 7.42 0.000 intron (NM_005900, intron 5 of 6) MER1B|DNA|hAT-Charlie -36153 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA chr12-6017 chr12 107878125 107878335 + 7.42 0.000 Intergenic AluSz|SINE|Alu 25541 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr10-3897 chr10 63465806 63466016 + 7.42 0.000 promoter-TSS (NM_001322252) promoter-TSS (NM_001322252) 66 NM_001322252 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr1-12515 chr1 22822549 22822759 + 7.42 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 40572 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr2-10610 chr2 5985149 5985359 + 7.42 0.000 intron (NR_026833, intron 2 of 2) intron (NR_026833, intron 2 of 2) 3276 NR_026833 400940 Hs.378814 NM_207479 LOC400940 - uncharacterized LOC400940 ncRNA chr12-3839 chr12 94606375 94606585 + 7.42 0.000 intron (NM_020698, intron 1 of 3) AluSz|SINE|Alu 9521 NM_001301036 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr11-5234 chr11 22157787 22157997 + 7.42 0.000 Intergenic Intergenic -35193 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr6-5633 chr6 64224789 64224999 + 7.42 0.000 intron (NM_001292009, intron 31 of 43) intron (NM_001292009, intron 31 of 43) 418058 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr11-6683 chr11 76849528 76849738 + 7.42 0.000 Intergenic Intergenic -11285 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr8-5241 chr8 127483012 127483222 + 7.42 0.000 promoter-TSS (NR_117100) promoter-TSS (NR_117100) -978 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr4-2809 chr4 35710514 35710724 + 7.42 0.000 Intergenic L1PA16|LINE|L1 533320 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr3-8417 chr3 108121073 108121283 + 7.42 0.000 Intergenic L3|LINE|CR1 -3886 NR_110030 101929623 Hs.570653 NR_110028 ENSG00000271856 LINC01215 - long intergenic non-protein coding RNA 1215 ncRNA chr14-3166 chr14 69555415 69555625 + 7.42 0.000 Intergenic Intergenic 19351 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr3-9344 chr3 46401295 46401505 + 7.42 0.000 intron (NR_125406, intron 1 of 3) LTR16B2|LTR|ERVL 5659 NR_125406 102724297 Hs.622021 NR_125406 LOC102724297 - uncharacterized LOC102724297 ncRNA chr5-3600 chr5 106572197 106572407 + 7.42 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 438712 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr15-1970 chr15 40185553 40185763 + 7.42 0.000 intron (NM_001211, intron 8 of 22) intron (NM_001211, intron 8 of 22) 24649 NM_001211 701 Hs.513645 NM_001211 ENSG00000156970 BUB1B BUB1beta|BUBR1|Bub1A|MAD3L|MVA1|SSK1|hBUBR1 BUB1 mitotic checkpoint serine/threonine kinase B protein-coding chr2-12874 chr2 97810870 97811080 + 7.42 0.000 intron (NM_015348, intron 18 of 40) intron (NM_015348, intron 18 of 40) 76569 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr2-14289 chr2 216279484 216279694 + 7.42 0.000 intron (NM_020814, intron 2 of 3) intron (NM_020814, intron 2 of 3) 62700 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA chr13-1313 chr13 109294056 109294266 + 7.42 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -106535 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr13-1533 chr13 26962056 26962266 + 7.42 0.000 Intergenic Intergenic -163372 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr5-5317 chr5 127192905 127193115 + 7.42 0.000 Intergenic Intergenic -97754 NM_001308121 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr13-3943 chr13 60446337 60446547 + 7.42 0.000 intron (NM_030794, intron 3 of 13) AluSz|SINE|Alu 49222 NM_001146070 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr9-8710 chr9 131344058 131344268 + 7.42 0.000 Intergenic L1PA6|LINE|L1 54440 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr2-5973 chr2 57809647 57809857 + 7.42 0.000 Intergenic AluSz|SINE|Alu -97899 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr4-637 chr4 52659275 52659485 + 7.42 0.000 promoter-TSS (NM_022832) promoter-TSS (NM_022832) -26 NR_125363 643783 Hs.631514 NR_125363 ENSG00000248866 USP46-AS1 - USP46 antisense RNA 1 ncRNA chr7-8573 chr7 65302708 65302918 + 7.42 0.000 Intergenic LTR23|LTR|ERV1 -70986 NM_001287532 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr18-3082 chr18 33560892 33561102 + 7.42 0.000 Intergenic MER61C|LTR|ERV1 -17222 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr5-1530 chr5 168291837 168292047 + 7.42 0.000 5' UTR (NM_015238, exon 1 of 23) 5' UTR (NM_015238, exon 1 of 23) 297 NM_001161661 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chrX-2465 chrX 82879029 82879239 + 7.42 0.000 Intergenic L1PA16|LINE|L1 -629156 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr18-1926 chr18 34317062 34317272 + 7.42 0.000 Intergenic Intergenic -93616 NM_001353237 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr7-5200 chr7 11807073 11807283 + 7.42 0.000 intron (NM_015204, intron 1 of 26) intron (NM_015204, intron 1 of 26) 25020 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr13-2050 chr13 51007697 51007907 + 7.42 0.000 intron (NR_003923, intron 13 of 16) intron (NR_003923, intron 13 of 16) 58355 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr1-9762 chr1 54813280 54813490 + 7.42 0.000 intron (NM_001110533, intron 6 of 9) L1MC1|LINE|L1 7322 NM_001110533 163747 Hs.376018 NM_152607 ENSG00000162398 LEXM C1orf177|LEM lymphocyte expansion molecule protein-coding chr11-10049 chr11 83714886 83715096 + 7.42 0.000 intron (NM_001142699, intron 18 of 27) L1PA7|LINE|L1 -32566 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-5707 chr12 112935819 112936029 + 7.42 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -2550 NM_006187 4940 Hs.528634 NM_006187 ENSG00000111331 OAS3 p100|p100OAS 2'-5'-oligoadenylate synthetase 3 protein-coding chr14-4427 chr14 32252091 32252301 + 7.42 0.000 Intergenic Intergenic -48927 NR_004394 26827 NR_004394 ENSG00000206625 RNU6-1 RNU6|RNU6A|U6|U6-1 RNA, U6 small nuclear 1 snRNA chr16-6675 chr16 69787951 69788161 + 7.42 0.000 intron (NM_001270455, intron 2 of 8) L2a|LINE|L2 25724 NM_007014 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chrX-2248 chrX 46749564 46749774 + 7.42 0.000 intron (NM_001257291, intron 1 of 16) intron (NM_001257291, intron 1 of 16) 9449 NM_001257291 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr1-9590 chr1 44261334 44261544 + 7.42 0.000 intron (NM_001301698, intron 6 of 7) intron (NM_001301698, intron 6 of 7) -8880 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr4-6961 chr4 20127005 20127215 + 7.42 0.000 Intergenic Intergenic -124795 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr6-2542 chr6 22892559 22892769 + 7.42 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -174740 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr15-3173 chr15 68932919 68933129 + 7.42 0.000 intron (NM_001184780, intron 1 of 15) intron (NM_001184780, intron 1 of 15) 2499 NM_001184780 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr3-6193 chr3 61488654 61488864 + 7.42 0.000 Intergenic Intergenic -72812 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr12-6387 chr12 69514571 69514781 + 7.42 0.000 promoter-TSS (NR_145803) promoter-TSS (NR_145803) -764 NR_145803 109623461 NR_145803 SNORA113 - small nucleolar RNA, H/ACA box 113 snoRNA chr2-11508 chr2 237278550 237278760 + 7.42 0.000 Intergenic Intergenic 135509 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr3-8991 chr3 17764514 17764724 + 7.42 0.000 Intergenic Intergenic 21675 NR_135536 105376975 Hs.543238 NR_135536 LOC105376975 - uncharacterized LOC105376975 ncRNA chr13-2878 chr13 111343133 111343343 + 7.42 0.000 intron (NM_152324, intron 5 of 5) intron (NM_152324, intron 5 of 5) 22596 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr2-7577 chr2 25169828 25170038 + 7.42 0.000 Intergenic L2c|LINE|L2 -1082 NM_001035256 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr21-1864 chr21 42366723 42366933 + 7.42 0.000 promoter-TSS (NM_003225) promoter-TSS (NM_003225) -293 NM_003225 7031 Hs.162807 NM_003225 ENSG00000160182 TFF1 BCEI|D21S21|HP1.A|HPS2|pNR-2|pS2 trefoil factor 1 protein-coding chr7-3295 chr7 40299136 40299346 + 7.42 0.000 intron (NM_024728, intron 8 of 14) MER102c|DNA|hAT-Charlie 164265 NM_001193312 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding chr6-5152 chr6 125570403 125570613 + 7.42 0.000 Intergenic Intergenic -103845 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr1-8975 chr1 9677050 9677260 + 7.42 0.000 intron (NR_126367, intron 1 of 1) intron (NR_126367, intron 1 of 1) 10419 NR_126367 101929074 Hs.661762 NR_126366 ENSG00000231789 PIK3CD-AS2 - PIK3CD antisense RNA 2 ncRNA chr1-15205 chr1 110223277 110223487 + 7.42 0.000 exon (NM_001039574, exon 2 of 4) exon (NM_001039574, exon 2 of 4) 13068 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr7-5931 chr7 99578227 99578437 + 7.42 0.000 Intergenic Intergenic 19498 NM_001363333 79027 Hs.599798 NM_024061 ENSG00000197343 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding chr4-2271 chr4 182578348 182578558 + 7.42 0.000 intron (NM_001080477, intron 3 of 27) L2a|LINE|L2 335051 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr4-6301 chr4 84683420 84683630 + 7.42 0.000 intron (NM_014991, intron 63 of 67) intron (NM_014991, intron 63 of 67) 100398 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr19-5754 chr19 19144559 19144769 + 7.42 0.000 TTS (NM_005919) TTS (NM_005919) -6186 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr12-4233 chr12 108330859 108331069 + 7.42 0.000 intron (NM_004072, intron 1 of 2) intron (NM_004072, intron 1 of 2) 8347 NM_001142343 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chrX-741 chrX 11427552 11427762 + 7.42 0.000 5' UTR (NM_001287242, exon 1 of 13) 5' UTR (NM_001287242, exon 1 of 13) 161 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chrX-5113 chrX 128596776 128596986 + 7.42 0.000 Intergenic L1PA10|LINE|L1 -544478 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr4-4587 chr4 76105682 76105892 + 7.42 0.000 intron (NM_001130016, intron 10 of 11) intron (NM_001130016, intron 10 of 11) 31092 NM_001179 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr18-1648 chr18 58309881 58310091 + 7.42 0.000 intron (NM_001144965, intron 5 of 30) intron (NM_001144965, intron 5 of 30) 88415 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr11-5508 chr11 83774227 83774437 + 7.42 0.000 intron (NM_001142699, intron 18 of 27) MIRb|SINE|MIR -91907 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr1-13553 chr1 7222420 7222630 + 7.42 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 167229 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr7-8237 chr7 35214751 35214961 + 7.42 0.000 intron (NM_001077653, intron 6 of 7) intron (NM_001077653, intron 6 of 7) -28694 NR_002833 554236 Hs.594815 NR_002833 DPY19L2P1 - DPY19L2 pseudogene 1 pseudo chr12-5499 chr12 127223805 127224015 + 7.42 0.000 Intergenic Intergenic 60373 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr7-6616 chr7 104825605 104825815 + 7.42 0.000 intron (NM_199000, intron 2 of 2) MLT1J|LTR|ERVL-MaLR -21618 NR_034141 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr22-3648 chr22 22199139 22199349 + 7.42 0.000 Intergenic Intergenic -45542 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr17-4508 chr17 74357411 74357621 + 7.42 0.000 exon (NM_001080466, exon 3 of 3) exon (NM_001080466, exon 3 of 3) 4352 NM_001080466 388419 NM_001080466 ENSG00000204347 BTBD17 BTBD17A|LGALS3BPL|TANGO10A BTB domain containing 17 protein-coding chr3-7490 chr3 151328530 151328740 + 7.42 0.000 exon (NM_176894, exon 2 of 2) exon (NM_176894, exon 2 of 2) 914 NM_176894 53829 Hs.546396 NM_023914 ENSG00000181631 P2RY13 FKSG77|GPCR1|GPR86|GPR94|P2Y13|SP174 purinergic receptor P2Y13 protein-coding chr15-3859 chr15 89388724 89388934 + 7.42 0.000 intron (NR_015411, intron 5 of 6) intron (NR_015411, intron 5 of 6) 10787 NR_015411 254559 Hs.136313 NR_015411 ENSG00000255571 MIR9-3HG LINC00925 MIR9-3 host gene ncRNA chr7-4306 chr7 29655362 29655572 + 7.42 0.000 intron (NR_024278, intron 1 of 1) AluSz6|SINE|Alu 25361 NR_039600 100616354 NR_039600 ENSG00000212024 MIR550A3 mir-550a-3 microRNA 550a-3 ncRNA chr9-5456 chr9 98315712 98315922 + 7.42 0.000 intron (NM_005458, intron 13 of 18) intron (NM_005458, intron 13 of 18) -60168 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr17-6951 chr17 43857214 43857424 + 7.42 0.000 intron (NM_145273, intron 6 of 6) intron (NM_145273, intron 6 of 6) 10143 NM_145273 146894 Hs.147313 NM_145273 ENSG00000161649 CD300LG CLM-9|CLM9|NEPMUCIN|TREM-4|TREM4 CD300 molecule like family member g protein-coding chr6-7733 chr6 90466511 90466721 + 7.42 0.000 Intergenic Intergenic 120456 NM_145332 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr2-13260 chr2 127074258 127074468 + 7.42 0.000 intron (NM_001320633, intron 2 of 14) intron (NM_001320633, intron 2 of 14) 7702 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr17-5228 chr17 17191415 17191625 + 7.42 0.000 3' UTR (NM_015134, exon 23 of 23) 3' UTR (NM_015134, exon 23 of 23) 14813 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr1-15487 chr1 155391881 155392091 + 7.42 0.000 intron (NM_001366177, intron 7 of 27) L1MEb|LINE|L1 -41194 NR_034180 645682 Hs.632482 NR_034180 ENSG00000237872 POU5F1P4 OCT3|OCT4|OTF-3|OTF3|Oct-3|Oct-4|Oct4-pg4|POU5F1|POU5FLC1 POU class 5 homeobox 1 pseudogene 4 pseudo chr10-3819 chr10 132960862 132961072 + 7.42 0.000 TTS (NR_125763) TTS (NR_125763) 1270 NR_125763 103695432 Hs.680406 NR_125763 ENSG00000224758 LINC01167 TCONS_00018075 long intergenic non-protein coding RNA 1167 ncRNA chr20-3091 chr20 23095172 23095382 + 7.42 0.000 Intergenic Intergenic -8953 NM_012072 22918 Hs.97199 NM_012072 ENSG00000125810 CD93 C1QR1|C1qR(P)|C1qRP|CDw93|ECSM3|MXRA4|dJ737E23.1 CD93 molecule protein-coding chr2-5990 chr2 70094209 70094419 + 7.42 0.000 Intergenic Intergenic 6837 NM_006196 5093 Hs.2853 NM_006196 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding chr11-5600 chr11 112647303 112647513 + 7.42 0.000 Intergenic L2c|LINE|L2 -91606 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr7-2778 chr7 73428335 73428545 + 7.42 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -5338 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr1-9198 chr1 21854593 21854803 + 7.42 0.000 exon (NM_001291860, exon 49 of 97) exon (NM_001291860, exon 49 of 97) 42433 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr14-4342 chr14 23207839 23208049 + 7.42 0.000 intron (NM_001370218, intron 2 of 15) MER4A1|LTR|ERV1 22623 NM_001370218 100507650 NM_001282322 ENSG00000215277 RNF212B C14orf164 ring finger protein 212B protein-coding chr1-9182 chr1 21225336 21225546 + 7.42 0.000 intron (NM_001113347, intron 14 of 16) intron (NM_001113347, intron 14 of 16) -48544 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr18-1342 chr18 79543983 79544193 + 7.42 0.000 Intergenic Intergenic -35194 NR_148949 284240 Hs.448912 NR_148949 LOC284240 - uncharacterized LOC284240 ncRNA chr7-8810 chr7 83258446 83258656 + 7.42 0.000 Intergenic Intergenic -95667 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr1-16553 chr1 233793805 233794015 + 7.42 0.000 Intergenic L1PA13|LINE|L1 -110766 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr20-2193 chr20 50948023 50948233 + 7.42 0.000 intron (NM_003859, intron 3 of 8) LTR33A|LTR|ERVL 10436 NM_001317036 8813 Hs.654951 NM_003859 ENSG00000000419 DPM1 CDGIE|MPDS dolichyl-phosphate mannosyltransferase subunit 1, catalytic protein-coding chr11-4012 chr11 6623445 6623655 + 7.42 0.000 exon (NM_003737, exon 21 of 21) exon (NM_003737, exon 21 of 21) -4128 NM_000391 1200 Hs.523454 NM_000391 ENSG00000166340 TPP1 CLN2|GIG1|LPIC|SCAR7|TPP-1 tripeptidyl peptidase 1 protein-coding chr22-2205 chr22 10738954 10739164 + 7.42 0.000 Intergenic AluY|SINE|Alu 222470 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr4-8093 chr4 124460014 124460224 + 7.42 0.000 Intergenic Intergenic 98315 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr1-16408 chr1 225289559 225289769 + 7.42 0.000 intron (NM_001367479, intron 54 of 85) intron (NM_001367479, intron 54 of 85) 138374 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr1-8554 chr1 165441792 165442002 + 7.42 0.000 intron (NR_033824, intron 1 of 1) intron (NR_033824, intron 1 of 1) 3229 NR_033824 6258 Hs.26550 NM_006917 ENSG00000143171 RXRG NR2B3|RXRC retinoid X receptor gamma protein-coding chr15-3091 chr15 63844019 63844229 + 7.42 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -10176 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding chr21-1443 chr21 28455171 28455381 + 7.42 0.000 Intergenic Intergenic -84042 NR_026553 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr2-9411 chr2 231894742 231894952 + 7.42 0.000 Intergenic Intergenic -2549 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr19-4744 chr19 28289827 28290037 + 7.42 0.000 Intergenic Intergenic -316756 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr20-4177 chr20 45014700 45014910 + 7.42 0.000 intron (NM_001352385, intron 9 of 11) intron (NM_001352385, intron 9 of 11) 48293 NR_147974 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding chr10-7131 chr10 100401834 100402044 + 7.42 0.000 Intergenic Intergenic 28363 NR_026762 90271 Hs.628088 NR_026762 ENSG00000235823 OLMALINC C10orf75|HI-LNC80|LINC00263|NCRNA00263|OLMALINCAS oligodendrocyte maturation-associated long intergenic non-coding RNA ncRNA chr20-1495 chr20 30891415 30891625 + 7.42 0.000 Intergenic Intergenic -366144 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr2-13407 chr2 140930625 140930835 + 7.42 0.000 intron (NM_018557, intron 20 of 90) intron (NM_018557, intron 20 of 90) -344045 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr4-993 chr4 147547743 147547953 + 7.42 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 66751 NR_148963 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr4-7478 chr4 71680767 71680977 + 7.42 0.000 Intergenic Intergenic 103207 NM_000583 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr15-2690 chr15 80900778 80900988 + 7.42 0.000 intron (NM_001293304, intron 12 of 29) intron (NM_001293304, intron 12 of 29) -58810 NR_030393 693132 NR_030393 ENSG00000208003 MIR549A MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a microRNA 549a ncRNA chr15-3906 chr15 25957391 25957601 + 7.42 0.000 intron (NR_040082, intron 1 of 4) (CA)n|Simple_repeat|Simple_repeat 55136 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr4-5025 chr4 140083314 140083524 + 7.42 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -44596 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr16-4174 chr16 9259062 9259272 + 7.42 0.000 Intergenic Intergenic -96421 NR_135195 101927009 Hs.537273 NR_135195 ENSG00000261617 LINC02177 - long intergenic non-protein coding RNA 2177 ncRNA chr1-8273 chr1 37636113 37636323 + 7.42 0.000 Intergenic Intergenic -1326 NM_001242910 284654 Hs.135015 NM_173640 ENSG00000169218 RSPO1 CRISTIN3|RSPO R-spondin 1 protein-coding chr10-4705 chr10 68409 68619 + 7.42 0.000 Intergenic Intergenic -19276 NM_177987 347688 Hs.532659 NM_177987 ENSG00000261456 TUBB8 OOMD|OOMD2|bA631M21.2 tubulin beta 8 class VIII protein-coding chr17-4230 chr17 43005547 43005757 + 7.42 0.000 Intergenic AluY|SINE|Alu -1132 NM_001330230 3430 Hs.632258 NM_005533 ENSG00000068079 IFI35 IFP35 interferon induced protein 35 protein-coding chr21-1456 chr21 32245314 32245524 + 7.42 0.000 Intergenic Intergenic 33630 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr10-9169 chr10 129763919 129764129 + 7.42 0.000 intron (NM_002412, intron 4 of 4) intron (NM_002412, intron 4 of 4) 79350 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr9-4839 chr9 137739819 137740029 + 7.42 0.000 intron (NM_001354263, intron 4 of 26) intron (NM_001354263, intron 4 of 26) 48482 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr1-14078 chr1 29730172 29730382 + 7.42 0.000 Intergenic Intergenic 307335 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr8-4424 chr8 109124456 109124666 + 7.42 0.000 Intergenic Intergenic 37933 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr6-5851 chr6 35509718 35509928 + 7.42 0.000 intron (NM_001289395, intron 5 of 13) intron (NM_001289395, intron 5 of 13) 3073 NM_001289395 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr1-11956 chr1 70768376 70768586 + 7.42 0.000 intron (NR_125938, intron 5 of 6) L1PA14|LINE|L1 62028 NR_125938 101927244 Hs.568660 NR_125938 ENSG00000229051 LINC01788 - long intergenic non-protein coding RNA 1788 ncRNA chr6-5475 chr6 161100042 161100252 + 7.42 0.000 intron (NM_005922, intron 17 of 26) intron (NM_005922, intron 17 of 26) 61835 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr2-3788 chr2 12883946 12884156 + 7.42 0.000 Intergenic L2a|LINE|L2 122962 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr15-3121 chr15 65326271 65326481 + 7.42 0.000 TTS (NM_004884) TTS (NM_004884) 21699 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr13-2769 chr13 99311158 99311368 + 7.42 0.000 intron (NR_026644, intron 4 of 8) L2a|LINE|L2 -3864 NM_004951 1880 Hs.784 NM_004951 ENSG00000169508 GPR183 EBI2|hEBI2 G protein-coupled receptor 183 protein-coding chr4-3454 chr4 99029977 99030187 + 7.42 0.000 intron (NM_015143, intron 2 of 10) intron (NM_015143, intron 2 of 10) 32695 NR_037455 100500867 NR_037455 ENSG00000265213 MIR3684 - microRNA 3684 ncRNA chr13-4005 chr13 70840350 70840560 + 7.42 0.000 Intergenic L1PA15-16|LINE|L1 -174686 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr18-1133 chr18 5438503 5438713 + 7.42 0.000 intron (NM_001281535, intron 7 of 21) intron (NM_001281535, intron 7 of 21) 101948 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr4-3467 chr4 113141926 113142136 + 7.42 0.000 intron (NM_001354237, intron 1 of 46) intron (NM_001354237, intron 1 of 46) -10251 NR_107049 102465878 NR_107049 ENSG00000275810 MIR8082 hsa-mir-8082 microRNA 8082 ncRNA chr2-6564 chr2 220068930 220069140 + 7.42 0.000 Intergenic Intergenic -162470 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr10-4287 chr10 11604028 11604238 + 7.42 0.000 intron (NM_014688, intron 1 of 14) MIRc|SINE|MIR -7168 NR_160647 107984208 Hs.590986 NR_160647 LOC107984208 - uncharacterized LOC107984208 ncRNA chr9-3615 chr9 87694970 87695180 + 7.42 0.000 intron (NM_004938, intron 21 of 25) intron (NM_004938, intron 21 of 25) -31044 NM_001912 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr1-7890 chr1 119978250 119978460 + 7.42 0.000 intron (NM_001200001, intron 5 of 21) L2c|LINE|L2 -81840 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr1-16351 chr1 219555527 219555737 + 7.42 0.000 intron (NR_135822, intron 1 of 3) intron (NR_135822, intron 1 of 3) 1692 NR_135822 102723886 Hs.525963 NR_135822 LYPLAL1-AS1 - LYPLAL1 antisense RNA 1 ncRNA chr20-2776 chr20 53222461 53222671 + 7.42 0.000 intron (NM_001193421, intron 1 of 2) intron (NM_001193421, intron 1 of 2) 37283 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr22-3334 chr22 22838897 22839107 + 7.42 0.000 Intergenic Intergenic 16226 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr22-3709 chr22 25078187 25078397 + 7.42 0.000 intron (NM_001145206, intron 4 of 10) AluJo|SINE|Alu 34400 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr9-3585 chr9 76321376 76321586 + 7.42 0.000 exon (NM_001190482, exon 30 of 37) exon (NM_001190482, exon 30 of 37) 72945 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr18-1271 chr18 58473787 58473997 + 7.42 0.000 Intergenic MLT2B1|LTR|ERVL -22740 NR_039899 100616357 NR_039899 ENSG00000207778 MIR3591 - microRNA 3591 ncRNA chr11-8122 chr11 45624501 45624711 + 7.42 0.000 Intergenic Intergenic 41016 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr1-10281 chr1 148342403 148342613 + 7.42 0.000 Intergenic Intergenic -7954 NR_049810 100847044 NR_049810 ENSG00000283676 MIR5087 - microRNA 5087 ncRNA chr6-7380 chr6 49577594 49577804 + 7.42 0.000 Intergenic Intergenic 27031 NR_146853 135398 Hs.722010 NM_153344 ENSG00000197261 C6orf141 - chromosome 6 open reading frame 141 protein-coding chr17-4414 chr17 40243954 40244164 + 7.42 0.000 intron (NM_133264, intron 1 of 7) intron (NM_133264, intron 1 of 7) 24755 NM_133264 147179 Hs.421622 NM_133264 ENSG00000171475 WIPF2 WICH|WIRE WAS/WASL interacting protein family member 2 protein-coding chr19-3667 chr19 8178184 8178394 + 7.42 0.000 Intergenic AluJb|SINE|Alu -28697 NM_032447 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr12-6572 chr12 121590046 121590256 + 7.42 0.000 Intergenic AluSx|SINE|Alu -6378 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr2-9701 chr2 48467624 48467834 + 7.42 0.000 intron (NR_024188, intron 9 of 21) MLT1F|LTR|ERVL-MaLR 26960 NM_001193475 129285 Hs.654619 NM_152994 ENSG00000162869 PPP1R21 CCDC128|KLRAQ1 protein phosphatase 1 regulatory subunit 21 protein-coding chr1-13790 chr1 18204685 18204895 + 7.42 0.000 intron (NM_032880, intron 1 of 9) intron (NM_032880, intron 1 of 9) 96992 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr2-12977 chr2 105176337 105176547 + 7.42 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 32329 NR_136172 105373984 Hs.570237 NR_136172 ENSG00000226508 LINC01918 - long intergenic non-protein coding RNA 1918 ncRNA chr19-4861 chr19 39180043 39180253 + 7.42 0.000 3' UTR (NM_001014831, exon 11 of 11) 3' UTR (NM_001014831, exon 11 of 11) -16816 NM_001001414 342897 Hs.726934 NM_001001414 ENSG00000188505 NCCRP1 FBXO50|NCCRP-1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) protein-coding chr3-5777 chr3 24386117 24386327 + 7.42 0.000 intron (NM_001354709, intron 1 of 10) intron (NM_001354709, intron 1 of 10) -107865 NR_046244 644990 Hs.631912 NR_046244 THRB-AS1 - THRB antisense RNA 1 ncRNA chr16-3545 chr16 48628915 48629125 + 7.42 0.000 Intergenic Intergenic -18840 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr2-12095 chr2 33677814 33678024 + 7.42 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -28967 NR_126403 104355287 Hs.636582 NR_126403 ENSG00000228262 LINC01317 - long intergenic non-protein coding RNA 1317 ncRNA chr2-14023 chr2 192107090 192107300 + 7.42 0.000 intron (NM_001305134, intron 4 of 9) intron (NM_001305134, intron 4 of 9) 87738 NM_016192 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr1-12521 chr1 23670963 23671173 + 7.42 0.000 Intergenic Intergenic -20711 NM_001199802 6135 Hs.719951 NM_000975 ENSG00000142676 RPL11 DBA7|GIG34|L11|uL5 ribosomal protein L11 protein-coding chr1-5540 chr1 214608999 214609209 + 7.42 0.000 intron (NM_016343, intron 1 of 19) CpG 5909 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr17-2175 chr17 58531825 58532035 + 7.42 0.000 intron (NM_001368772, intron 2 of 13) CpG 154 NM_080416 5414 Hs.287518 NM_004574 ENSG00000108387 SEPTIN4 ARTS|BRADEION|C17orf47|CE5B3|H5|MART|PNUTL2|SEP4|SEPT4|hCDCREL-2|hucep-7 septin 4 protein-coding chr5-5943 chr5 82418376 82418586 + 7.42 0.000 Intergenic Intergenic 139019 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr1-16239 chr1 209845149 209845359 + 7.42 0.000 intron (NM_014388, intron 11 of 11) intron (NM_014388, intron 11 of 11) 17282 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 UTP25 C1orf107|DEF|DIEXF|DJ434O14.5 UTP25 small subunit processor component protein-coding chr7-5769 chr7 76037439 76037649 + 7.42 0.000 intron (NM_001317786, intron 1 of 8) intron (NM_001317786, intron 1 of 8) -7020 NM_001317789 51657 Hs.11615 NM_016086 ENSG00000127952 STYXL1 DUSP24|MK-STYX|MKSTYX serine/threonine/tyrosine interacting like 1 protein-coding chr11-8276 chr11 69481037 69481247 + 7.42 0.000 Intergenic Intergenic -4419 NR_120544 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr6-8480 chr6 156767759 156767969 + 7.42 0.000 Intergenic Intergenic -9991 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr17-8133 chr17 58353257 58353467 + 7.42 0.000 non-coding (NR_038410, exon 5 of 5) non-coding (NR_038410, exon 5 of 5) -1161 NR_073470 6827 Hs.439481 NM_003168 ENSG00000213246 SUPT4H1 SPT4|SPT4H|SUPT4H|Supt4a SPT4 homolog, DSIF elongation factor subunit protein-coding chrX-3104 chrX 150062707 150062917 + 7.42 0.000 Intergenic Tigger19a|DNA|TcMar-Tigger 124264 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr1-12033 chr1 110241005 110241215 + 7.42 0.000 3' UTR (NM_004978, exon 4 of 4) 3' UTR (NM_004978, exon 4 of 4) 30796 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr2-9193 chr2 216397575 216397785 + 7.42 0.000 Intergenic Intergenic -14734 NM_014140 50485 Hs.516674 NM_014140 ENSG00000138375 SMARCAL1 HARP|HHARP SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 protein-coding chr7-4643 chr7 30595421 30595631 + 7.42 0.000 intron (NM_002047, intron 1 of 16) intron (NM_002047, intron 1 of 16) 648 NM_002047 2617 Hs.404321 NM_002047 ENSG00000106105 GARS CMT2D|DSMAV|GlyRS|HMN5|SMAD1 glycyl-tRNA synthetase protein-coding chr9-6572 chr9 123234172 123234382 + 7.42 0.000 intron (NR_033234, intron 1 of 18) intron (NR_033234, intron 1 of 18) 34309 NM_001171137 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr12-7641 chr12 81785168 81785378 + 7.42 0.000 Intergenic Intergenic -25923 NM_003625 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr8-5638 chr8 105646618 105646828 + 7.42 0.000 intron (NM_001362837, intron 5 of 7) HAL1|LINE|L1 327180 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr8-5586 chr8 88922669 88922879 + 7.42 0.000 Intergenic Intergenic -595291 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr9-7249 chr9 4277755 4277965 + 7.42 0.000 intron (NM_001042413, intron 2 of 10) intron (NM_001042413, intron 2 of 10) 22208 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr17-6798 chr17 6059428 6059638 + 7.42 0.000 Intergenic Intergenic -11081 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr8-4616 chr8 132073791 132074001 + 7.42 0.000 intron (NM_001145095, intron 13 of 15) L2|LINE|L2 -14514 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr5-7315 chr5 15719985 15720195 + 7.42 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -105088 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr16-5836 chr16 860866 861076 + 7.42 0.000 intron (NR_147885, intron 10 of 11) L1MD1|LINE|L1 55528 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr7-4274 chr7 6332091 6332301 + 7.42 0.000 intron (NM_001037163, intron 1 of 1) LTR37A|LTR|ERV1 16771 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chr2-13246 chr2 126042538 126042748 + 7.42 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 75342 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr17-5160 chr17 9121231 9121441 + 7.42 0.000 intron (NM_004822, intron 2 of 6) intron (NM_004822, intron 2 of 6) 57782 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr13-3850 chr13 49898558 49898768 + 7.42 0.000 Intergenic AluSp|SINE|Alu 8254 NR_003268 220429 Hs.448219 NR_003268 ENSG00000181358 CTAGE10P - CTAGE family member 10, pseudogene pseudo chr21-1883 chr21 43800739 43800949 + 7.42 0.000 intron (NM_003683, intron 10 of 12) intron (NM_003683, intron 10 of 12) 11267 NM_003683 8568 Hs.110757 NM_003683 ENSG00000160214 RRP1 D21S2056E|NNP-1|NOP52|RRP1A ribosomal RNA processing 1 protein-coding chr8-3659 chr8 13444037 13444247 + 7.42 0.000 intron (NM_024767, intron 2 of 4) L1P1|LINE|L1 70709 NM_182643 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr2-10738 chr2 32851757 32851967 + 7.42 0.000 intron (NR_027098, intron 2 of 5) intron (NR_027098, intron 2 of 5) 26429 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr19-4743 chr19 27974098 27974308 + 7.42 0.000 intron (NR_146734, intron 6 of 7) intron (NR_146734, intron 6 of 7) -180263 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr2-11717 chr2 10267219 10267429 + 7.42 0.000 Intergenic Intergenic -35580 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr3-7291 chr3 8668481 8668691 + 7.42 0.000 Intergenic Intergenic -16502 NM_001256749 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr10-6879 chr10 32205713 32205923 + 7.42 0.000 Intergenic Intergenic 141340 NM_001272004 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr4-8667 chr4 178803669 178803879 + 7.42 0.000 Intergenic MER34-int|LTR|ERV1 -895838 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr12-4676 chr12 47805218 47805428 + 7.42 0.000 intron (NM_015401, intron 1 of 25) AluJo|SINE|Alu 14580 NM_001368046 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr10-7014 chr10 75916891 75917101 + 7.42 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 134235 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr19-4381 chr19 2767975 2768185 + 7.42 0.000 intron (NM_003021, intron 2 of 11) intron (NM_003021, intron 2 of 11) 15193 NM_003021 6449 Hs.203910 NM_003021 ENSG00000104969 SGTA SGT|alphaSGT|hSGT small glutamine rich tetratricopeptide repeat containing alpha protein-coding chr4-6459 chr4 142324611 142324821 + 7.42 0.000 intron (NM_001331040, intron 7 of 25) L1MEg2|LINE|L1 521819 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr2-14396 chr2 219895802 219896012 + 7.42 0.000 Intergenic Intergenic 8982 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr2-3293 chr2 83063494 83063704 + 7.42 0.000 Intergenic Intergenic 206796 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr4-3715 chr4 71132409 71132619 + 7.42 0.000 Intergenic Intergenic -54745 NM_001098484 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr4-8008 chr4 116563177 116563387 + 7.42 0.000 Intergenic L1PA11|LINE|L1 263557 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr7-1696 chr7 158587578 158587788 + 7.42 0.000 5' UTR (NM_001308267, exon 1 of 22) 5' UTR (NM_001308267, exon 1 of 22) 140 NM_001308267 5799 Hs.490789 NM_002847 ENSG00000155093 PTPRN2 IA-2beta|IAR|ICAAR|PTPRP|R-PTP-N2 protein tyrosine phosphatase receptor type N2 protein-coding chr3-9753 chr3 69357181 69357391 + 7.42 0.000 intron (NM_015123, intron 1 of 22) intron (NM_015123, intron 1 of 22) 28802 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr17-5610 chr17 48532621 48532831 + 7.42 0.000 Intergenic Intergenic -1715 NM_002144 3211 Hs.99992 NM_002144 ENSG00000120094 HOXB1 HCFP3|HOX2|HOX2I|Hox-2.9 homeobox B1 protein-coding chr1-15915 chr1 185642728 185642938 + 7.42 0.000 Intergenic L1PA4|LINE|L1 -14345 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr17-8623 chr17 81246926 81247136 + 7.42 0.000 exon (NM_001037984, exon 15 of 16) exon (NM_001037984, exon 15 of 16) 7117 NR_148426 284184 Hs.356545 NM_001086521 ENSG00000224877 NDUFAF8 C17orf89 NADH:ubiquinone oxidoreductase complex assembly factor 8 protein-coding chr3-7589 chr3 10476326 10476536 + 7.42 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) 29153 NM_001363862 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr15-2559 chr15 50907819 50908029 + 7.42 0.000 promoter-TSS (NM_007347) promoter-TSS (NM_007347) -759 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr2-12053 chr2 30771596 30771806 + 7.42 0.000 intron (NM_144575, intron 4 of 22) MIR|SINE|MIR 35745 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr16-3734 chr16 9682065 9682275 + 7.42 0.000 Intergenic AluSx1|SINE|Alu -226665 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr12-7924 chr12 108603107 108603317 + 7.42 0.000 Intergenic Intergenic -5128 NM_181724 338773 Hs.449718 NM_181724 ENSG00000183160 TMEM119 OBIF transmembrane protein 119 protein-coding chr9-7513 chr9 33016826 33017036 + 7.42 0.000 intron (NM_001368996, intron 1 of 7) L2a|LINE|L2 8189 NR_160926 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr12-6736 chr12 5841019 5841229 + 7.42 0.000 intron (NM_001278596, intron 4 of 25) intron (NM_001278596, intron 4 of 25) 104135 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr10-3309 chr10 2724963 2725173 + 7.42 0.000 Intergenic L1PA8|LINE|L1 -223606 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr3-4100 chr3 106635335 106635545 + 7.42 0.000 Intergenic MER44C|DNA|TcMar-Tigger 605198 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr5-6204 chr5 65978244 65978454 + 7.42 0.000 intron (NM_001253697, intron 1 of 25) intron (NM_001253697, intron 1 of 25) -32776 NR_028474 100303749 Hs.608060 NR_028474 LOC100303749 - LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene pseudo chr3-7868 chr3 127014502 127014712 + 7.42 0.000 exon (NM_032242, exon 12 of 31) exon (NM_032242, exon 12 of 31) 26013 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr2-8299 chr2 105121123 105121333 + 7.42 0.000 Intergenic Intergenic -18284 NR_110227 101927492 Hs.469537 NR_110227 ENSG00000231851 UTAT33 - uncharacterized LOC101927492 ncRNA chr7-8240 chr7 35330469 35330679 + 7.42 0.000 intron (NR_038864, intron 1 of 2) intron (NR_038864, intron 1 of 2) 16719 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr5-1991 chr5 169352459 169352669 + 7.42 0.000 Intergenic Intergenic -51425 NM_003062 6586 Hs.552087 NM_003062 ENSG00000184347 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit guidance ligand 3 protein-coding chr18-821 chr18 6554357 6554567 + 7.42 0.000 intron (NR_120518, intron 2 of 5) MIRb|SINE|MIR 43046 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA chr11-7357 chr11 67960938 67961148 + 7.42 0.000 Intergenic AluSx1|SINE|Alu 43054 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr2-9205 chr2 217147922 217148132 + 7.42 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -134706 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2-11038 chr2 110219504 110219714 + 7.42 0.000 intron (NM_001355251, intron 3 of 8) intron (NM_001355251, intron 3 of 8) -14596 NM_001128178 4867 Hs.280388 NM_000272 ENSG00000144061 NPHP1 JBTS4|NPH1|SLSN1 nephrocystin 1 protein-coding chr4-4125 chr4 7167081 7167291 + 7.42 0.000 Intergenic Intergenic -25352 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr17-4388 chr17 28517239 28517449 + 7.42 0.000 intron (NM_001369369, intron 1 of 8) intron (NM_001369369, intron 1 of 8) -6597 NM_003593 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chrX-5048 chrX 123330970 123331180 + 7.42 0.000 intron (NM_007325, intron 4 of 15) intron (NM_007325, intron 4 of 15) 146797 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr6-8570 chr6 163665665 163665875 + 7.42 0.000 intron (NR_134620, intron 1 of 1) intron (NR_134620, intron 1 of 1) 5714 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr15-3886 chr15 94564277 94564487 + 7.42 0.000 Intergenic MSTA|LTR|ERVL-MaLR 208452 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr2-11269 chr2 177641046 177641256 + 7.42 0.000 intron (NM_001077197, intron 20 of 20) L2|LINE|L2 -22409 NM_152275 92104 Hs.128384 NM_152275 ENSG00000197557 TTC30A IFT70A|TTC30B tetratricopeptide repeat domain 30A protein-coding chr1-10254 chr1 118841149 118841359 + 7.42 0.000 Intergenic MLT2B4|LTR|ERVL 147089 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chrX-2678 chrX 117611498 117611708 + 7.42 0.000 Intergenic MER91B|DNA|hAT-Tip100 362135 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr1-14634 chr1 56566889 56567099 + 7.42 0.000 intron (NM_003713, intron 1 of 5) intron (NM_003713, intron 1 of 5) 12569 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr19-4193 chr19 43774261 43774471 + 7.42 0.000 exon (NM_002250, exon 3 of 9) exon (NM_002250, exon 3 of 9) 6607 NM_002250 3783 Hs.10082 NM_002250 ENSG00000104783 KCNN4 DHS2|IK|IK1|IKCA1|KCA4|KCa3.1|SK4|hIKCa1|hKCa4|hSK4 potassium calcium-activated channel subfamily N member 4 protein-coding chr11-6231 chr11 47296814 47297024 + 7.42 0.000 intron (NM_130476, intron 22 of 32) AluJb|SINE|Alu -24809 NR_120569 101928943 Hs.664956 NR_120568 ENSG00000256746 LOC101928943 - uncharacterized LOC101928943 ncRNA chr4-5675 chr4 19992937 19993147 + 7.42 0.000 Intergenic Intergenic -258863 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr18-3044 chr18 28112891 28113101 + 7.42 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) 64134 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18-1449 chr18 40920449 40920659 + 7.42 0.000 Intergenic Intergenic 600123 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr10-7938 chr10 52702913 52703123 + 7.42 0.000 intron (NR_155748, intron 1 of 2) intron (NR_155748, intron 1 of 2) 52386 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA chr4-7625 chr4 82810104 82810314 + 7.42 0.000 Intergenic Intergenic -11352 NM_024906 79966 Hs.379191 NM_024906 ENSG00000145284 SCD5 ACOD4|FADS4|HSCD5|SCD2|SCD4 stearoyl-CoA desaturase 5 protein-coding chr5-8128 chr5 99111111 99111321 + 7.42 0.000 Intergenic Intergenic -181502 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr19-5155 chr19 4175450 4175660 + 7.42 0.000 intron (NM_001321061, intron 4 of 5) intron (NM_001321061, intron 4 of 5) 6751 NM_001321064 51548 Hs.423756 NM_016539 ENSG00000077463 SIRT6 SIR2L6 sirtuin 6 protein-coding chr3-9235 chr3 38349061 38349271 + 7.42 0.000 intron (NR_146068, intron 2 of 16) L2b|LINE|L2 2381 NM_005108 9942 Hs.659985 NM_005108 ENSG00000093217 XYLB - xylulokinase protein-coding chr2-12656 chr2 74329714 74329924 + 7.42 0.000 intron (NM_133478, intron 4 of 30) intron (NM_133478, intron 4 of 30) 13597 NM_133478 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding KZ208915.1-2 KZ208915.1 1502063 1502273 + 7.42 0.000 NA NA NA NA chr1-7475 chr1 86538747 86538957 + 7.42 0.000 Intergenic LTR16A2|LTR|ERVL -8226 NM_012128 22802 Hs.567422 NM_012128 ENSG00000016602 CLCA4 CaCC|CaCC2 chloride channel accessory 4 protein-coding chr2-4718 chr2 235283634 235283844 + 7.42 0.000 Intergenic Intergenic -210304 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr22-2049 chr22 43500656 43500866 + 7.42 0.000 intron (NM_001362786, intron 5 of 6) intron (NM_001362786, intron 5 of 6) -15493 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr20-1699 chr20 36300012 36300222 + 7.42 0.000 Intergenic Intergenic -6222 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr10-4665 chr10 127178350 127178560 + 7.42 0.000 intron (NM_001039762, intron 2 of 5) MER20|DNA|hAT-Charlie 18136 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr13-1322 chr13 20148775 20148985 + 7.42 0.000 intron (NM_021954, intron 1 of 1) intron (NM_021954, intron 1 of 1) 12172 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr6-4963 chr6 104789905 104790115 + 7.42 0.000 intron (NR_146792, intron 12 of 24) intron (NR_146792, intron 12 of 24) 69536 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr19-4205 chr19 46015949 46016159 + 7.42 0.000 exon (NM_001267723, exon 8 of 14) exon (NM_001267723, exon 8 of 14) -2878 NR_030412 768217 NR_030412 ENSG00000211580 MIR769 MIRN769|hsa-mir-769|mir-769 microRNA 769 ncRNA chr7-6921 chr7 78083479 78083689 + 7.42 0.000 intron (NM_001301128, intron 19 of 20) intron (NM_001301128, intron 19 of 20) 243454 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr15-2728 chr15 96492192 96492402 + 7.42 0.000 Intergenic LTR12C|LTR|ERV1 158532 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chrX-2548 chrX 100193440 100193650 + 7.42 0.000 Intergenic L2a|LINE|L2 216728 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr7-4213 chr7 147821905 147822115 + 7.42 0.000 intron (NM_014141, intron 12 of 22) L2a|LINE|L2 150331 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr9-5590 chr9 114094894 114095104 + 7.42 0.000 intron (NM_138424, intron 8 of 15) intron (NM_138424, intron 8 of 15) 4058 NM_138424 113220 Hs.28149 NM_138424 ENSG00000136883 KIF12 - kinesin family member 12 protein-coding chr1-15770 chr1 174569132 174569342 + 7.42 0.000 intron (NM_001366446, intron 13 of 25) intron (NM_001366446, intron 13 of 25) 121273 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr17-8437 chr17 76817640 76817850 + 7.42 0.000 Intergenic Intergenic 18701 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr5-4982 chr5 80318363 80318573 + 7.42 0.000 Intergenic Intergenic -1534 NM_032567 84654 Hs.519403 NM_032567 ENSG00000164299 SPZ1 CILD38|NYD-TSP1|PPP1R148 spermatogenic leucine zipper 1 protein-coding chr4-2528 chr4 47002626 47002836 + 7.42 0.000 Intergenic Intergenic -9150 NM_001204266 2557 Hs.248112 NM_000809 ENSG00000109158 GABRA4 - gamma-aminobutyric acid type A receptor alpha4 subunit protein-coding chr6-7718 chr6 89381235 89381445 + 7.42 0.000 intron (NM_021244, intron 2 of 6) intron (NM_021244, intron 2 of 6) -28618 NM_016021 51465 Hs.163776 NM_016021 ENSG00000198833 UBE2J1 CGI-76|HSPC153|HSPC205|HSU93243|NCUBE-1|NCUBE1|UBC6|UBC6E|Ubc6p ubiquitin conjugating enzyme E2 J1 protein-coding chr19-4866 chr19 39347302 39347512 + 7.42 0.000 intron (NM_001303614, intron 1 of 12) intron (NM_001303614, intron 1 of 12) 4948 NM_001303614 55095 Hs.612332 NM_018028 ENSG00000179134 SAMD4B SMGB|Smaug2 sterile alpha motif domain containing 4B protein-coding chr8-6703 chr8 84608119 84608329 + 7.42 0.000 intron (NM_001354308, intron 3 of 9) MER115|DNA|hAT-Tip100 -97703 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr8-5471 chr8 43811029 43811239 + 7.42 0.000 Intergenic ALR/Alpha|Satellite|centr 518692 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr11-6888 chr11 103800766 103800976 + 7.42 0.000 Intergenic Intergenic -49035 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr7-5376 chr7 31689160 31689370 + 7.42 0.000 intron (NM_001145123, intron 1 of 3) intron (NM_001145123, intron 1 of 3) 2050 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr15-3829 chr15 77689082 77689292 + 7.42 0.000 intron (NM_001301194, intron 2 of 3) intron (NM_001301194, intron 2 of 3) 6961 NM_001301200 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr17-5300 chr17 22319501 22319711 + 7.42 0.000 Intergenic Intergenic 20842 NR_028336 284123 Hs.348578 NM_203392 ENSG00000178130 FAM27E5 FAM27L family with sequence similarity E5 ncRNA chr9-6111 chr9 1615760 1615970 + 7.42 0.000 Intergenic Intergenic -399482 NM_001289397 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr1-10225 chr1 115323994 115324204 + 7.42 0.000 intron (NM_002506, intron 1 of 2) intron (NM_002506, intron 1 of 2) 14137 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr11-9877 chr11 74220557 74220767 + 7.42 0.000 intron (NM_001271593, intron 3 of 13) MIR|SINE|MIR 49373 NM_016147 51400 Hs.503251 NM_016147 ENSG00000214517 PPME1 ABDH19|PME-1 protein phosphatase methylesterase 1 protein-coding chr18-3059 chr18 30649250 30649460 + 7.42 0.000 Intergenic Intergenic 350445 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr3-9882 chr3 82049258 82049468 + 7.42 0.000 intron (NR_147146, intron 1 of 8) intron (NR_147146, intron 1 of 8) 63221 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr13-3406 chr13 96119841 96120051 + 7.42 0.000 intron (NM_153456, intron 1 of 1) MLT1C|LTR|ERVL-MaLR 29107 NM_153456 266722 Hs.171001 NM_153456 ENSG00000185352 HS6ST3 HS6ST-3 heparan sulfate 6-O-sulfotransferase 3 protein-coding chr6-3909 chr6 71350835 71351045 + 7.42 0.000 Intergenic Intergenic 26091 NR_029598 407032 NR_029598 ENSG00000199094 MIR30C2 MIRN30C2|mir-30c-2 microRNA 30c-2 ncRNA chr9-3873 chr9 133667616 133667826 + 7.42 0.000 intron (NM_001134707, intron 19 of 20) intron (NM_001134707, intron 19 of 20) -10313 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr3-10241 chr3 123075281 123075491 + 7.42 0.000 intron (NM_006810, intron 1 of 16) L2|LINE|L2 8361 NM_006810 10954 Hs.477352 NM_006810 ENSG00000065485 PDIA5 PDIR protein disulfide isomerase family A member 5 protein-coding chr2-12469 chr2 60794366 60794576 + 7.42 0.000 intron (NM_022894, intron 19 of 21) intron (NM_022894, intron 19 of 21) 38203 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr4-5787 chr4 79380249 79380459 + 7.42 0.000 Intergenic L1MA4A|LINE|L1 27874 NM_033214 2712 Hs.98008 NM_033214 ENSG00000196475 GK2 GKP2|GKTA glycerol kinase 2 protein-coding chr13-3134 chr13 81165623 81165833 + 7.42 0.000 Intergenic THE1B|LTR|ERVL-MaLR 61255 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr5-6703 chr5 66237335 66237545 + 7.42 0.000 Intergenic Intergenic -27994 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA chr4-4523 chr4 66832937 66833147 + 7.42 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 556218 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr4-3085 chr4 150411461 150411671 + 7.42 0.000 intron (NM_001367550, intron 47 of 56) intron (NM_001367550, intron 47 of 56) -167523 NR_149035 729558 Hs.647978 NR_149035 ENSG00000249690 LOC729558 - uncharacterized LOC729558 ncRNA chr4-7012 chr4 24734558 24734768 + 7.42 0.000 Intergenic Intergenic -60910 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr16-6076 chr16 11596986 11597196 + 7.42 0.000 Intergenic Intergenic -9625 NR_024320 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr15-2030 chr15 50546096 50546306 + 7.42 0.000 intron (NM_203494, intron 1 of 6) intron (NM_203494, intron 1 of 6) 465 NM_203494 373509 Hs.677758 NM_203494 ENSG00000170236 USP50 - ubiquitin specific peptidase 50 protein-coding chr10-6061 chr10 128997212 128997422 + 7.42 0.000 Intergenic Intergenic 84484 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr8-2685 chr8 91243359 91243569 + 7.42 0.000 intron (NM_001282357, intron 2 of 18) L1MEc|LINE|L1 -5855 NM_052832 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chr6-7936 chr6 110781515 110781725 + 7.42 0.000 intron (NM_001300963, intron 1 of 13) AluJb|SINE|Alu -33001 NM_001287215 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr5-6662 chr5 56110741 56110951 + 7.42 0.000 intron (NM_024669, intron 10 of 11) intron (NM_024669, intron 10 of 11) 115679 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA chr16-2687 chr16 80158961 80159171 + 7.42 0.000 intron (NR_120307, intron 4 of 5) MIRc|SINE|MIR 363817 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr1-7950 chr1 179768417 179768627 + 7.42 0.000 intron (NM_001329719, intron 1 of 4) intron (NM_001329719, intron 1 of 4) 25231 NM_173509 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding chr2-9410 chr2 231851471 231851681 + 7.42 0.000 Intergenic MER1B|DNA|hAT-Charlie 40722 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr11-5966 chr11 18001270 18001480 + 7.42 0.000 intron (NR_104040, intron 4 of 11) MLT1F1|LTR|ERVL-MaLR 11672 NM_012139 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr4-3372 chr4 10688198 10688408 + 7.42 0.000 Intergenic Intergenic -3535 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr11-10057 chr11 84289531 84289741 + 7.42 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) -16356 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr5-4598 chr5 31106511 31106721 + 7.42 0.000 Intergenic Intergenic -87070 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr22-3689 chr22 24207015 24207225 + 7.42 0.000 Intergenic LTR19A|LTR|ERV1 25633 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr1-10712 chr1 193625461 193625671 + 7.42 0.000 Intergenic L5|LINE|RTE-X 320821 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr7-4430 chr7 110130818 110131028 + 7.42 0.000 Intergenic Intergenic -170710 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr12-6627 chr12 179016 179226 + 7.42 0.000 TTS (NM_001170738).2 TTS (NM_001170738).2 -24524 NR_120475 101929384 Hs.569138 NR_120475 ENSG00000256577 LOC101929384 - uncharacterized LOC101929384 ncRNA chr3-4930 chr3 196238884 196239094 + 7.42 0.000 intron (NM_005017, intron 9 of 9) intron (NM_005017, intron 9 of 9) 22455 NM_152672 200931 Hs.630585 NM_152672 ENSG00000163959 SLC51A OSTA|OSTalpha solute carrier family 51 alpha subunit protein-coding chr22-3756 chr22 27240360 27240570 + 7.42 0.000 Intergenic MIR|SINE|MIR -15786 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr6-1999 chr6 17735281 17735491 + 7.42 0.000 Intergenic SVA_D|Retroposon|SVA 28343 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr11-6992 chr11 116949864 116950074 + 7.42 0.000 intron (NM_001366687, intron 3 of 4) L1M4b|LINE|L1 -112019 NM_000039 335 Hs.93194 NM_000039 ENSG00000118137 APOA1 apo(a) apolipoprotein A1 protein-coding chr8-6812 chr8 96571269 96571479 + 7.42 0.000 intron (NM_002998, intron 1 of 4) L2a|LINE|L2 -73868 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr20-2992 chr20 43237631 43237841 + 7.42 0.000 Intergenic Intergenic -47830 NM_007050 11122 Hs.526879 NM_007050 ENSG00000196090 PTPRT RPTPrho protein tyrosine phosphatase receptor type T protein-coding chr14-5354 chr14 103120900 103121110 + 7.42 0.000 non-coding (NR_138038, exon 2 of 2) non-coding (NR_138038, exon 2 of 2) 1904 NR_138038 105370683 Hs.252904 NR_138038 ENSG00000259717 LINC00677 C14orf74 long intergenic non-protein coding RNA 677 ncRNA chr14-1000 chr14 103109015 103109225 + 7.42 0.000 intron (NM_001077594, intron 10 of 10) intron (NM_001077594, intron 10 of 10) 8976 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3 like 4 protein-coding chr13-2810 chr13 102504708 102504918 + 7.42 0.000 Intergenic Intergenic -92173 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr8-3524 chr8 118764912 118765122 + 7.42 0.000 Intergenic Intergenic -143054 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr1-11718 chr1 10374318 10374528 + 7.42 0.000 exon (NM_015074, exon 44 of 47) exon (NM_015074, exon 44 of 47) -24641 NM_001304451 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr13-2409 chr13 43636332 43636542 + 7.42 0.000 intron (NM_001347964, intron 2 of 17) MIR3|SINE|MIR -6960 NM_001127615 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr10-4419 chr10 66784835 66785045 + 7.42 0.000 intron (NM_001127384, intron 7 of 17) LTR78|LTR|ERV1 -141096 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr8-7188 chr8 124609018 124609228 + 7.42 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 70000 NM_005005 4715 Hs.15977 NM_005005 ENSG00000147684 NDUFB9 B22|CI-B22|LYRM3|MC1DN24|UQOR22 NADH:ubiquinone oxidoreductase subunit B9 protein-coding chr15-2338 chr15 25422271 25422481 + 7.42 0.000 intron (NM_001354507, intron 1 of 14) L1ME1|LINE|L1 15853 NM_001354505 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr14-3650 chr14 77264570 77264780 + 7.42 0.000 TTS (NM_021257) TTS (NM_021257) -1543 NR_031661 100302236 NR_031661 ENSG00000221754 MIR1260A MIR1260|MIRN1260|hsa-mir-1260|hsa-mir-1260a|mir-1260a microRNA 1260a ncRNA chr11-7448 chr11 121249244 121249454 + 7.42 0.000 Intergenic Intergenic -43422 NM_006918 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr4-8618 chr4 172659210 172659420 + 7.42 0.000 intron (NR_125894, intron 2 of 2) L1MA4|LINE|L1 29602 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr12-7337 chr12 55458456 55458666 + 7.42 0.000 Intergenic L1PA14|LINE|L1 6347 NM_054105 341416 Hs.524483 NM_054105 ENSG00000179695 OR6C2 OR6C67 olfactory receptor family 6 subfamily C member 2 protein-coding chr15-4635 chr15 63147186 63147396 + 7.42 0.000 TTS (NM_015920) TTS (NM_015920) 10186 NM_015920 51065 Hs.108957 NM_015920 ENSG00000185088 RPS27L - ribosomal protein S27 like protein-coding chr19-6308 chr19 8956542 8956752 + 7.42 0.000 exon (NM_024690, exon 3 of 84) exon (NM_024690, exon 3 of 84) 24695 NM_024690 94025 Hs.432676 NM_024690 ENSG00000181143 MUC16 CA125 mucin 16, cell surface associated protein-coding chr8-4902 chr8 86010576 86010786 + 7.42 0.000 Intergenic L1P3|LINE|L1 58987 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr4-7485 chr4 72084950 72085160 + 7.42 0.000 intron (NM_001144756, intron 2 of 4) intron (NM_001144756, intron 2 of 4) 45923 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr3-6802 chr3 145285010 145285220 + 7.42 0.000 Intergenic L1MA5|LINE|L1 784070 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr4-7888 chr4 105343871 105344081 + 7.42 0.000 intron (NR_126420, intron 1 of 5) intron (NR_126420, intron 1 of 5) 8905 NR_126420 104384744 Hs.624109 NR_126420 TET2-AS1 - TET2 antisense RNA 1 ncRNA chr9-6857 chr9 77047391 77047601 + 7.42 0.000 Intergenic AluSq2|SINE|Alu 27841 NM_001013735 442425 Hs.553843 NM_001013735 ENSG00000204612 FOXB2 bA159H20.4 forkhead box B2 protein-coding chrX-5435 chrX 153831545 153831755 + 7.42 0.000 promoter-TSS (NM_032512) promoter-TSS (NM_032512) -763 NM_001303513 57595 Hs.92732 NM_032512 ENSG00000067840 PDZD4 LNX5|LU1|PDZK4|PDZRN4L PDZ domain containing 4 protein-coding chr17-4818 chr17 53882667 53882877 + 7.42 0.000 Intergenic MER20|DNA|hAT-Charlie 59845 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr12-5995 chr12 98136961 98137171 + 7.42 0.000 Intergenic Intergenic -141618 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr14-1653 chr14 105532879 105533089 + 7.42 0.000 non-coding (NR_135205, exon 2 of 2) non-coding (NR_135205, exon 2 of 2) 1129 NR_135205 105370697 Hs.148580 NR_135205 LOC105370697 - uncharacterized LOC105370697 ncRNA chr12-8063 chr12 116359545 116359755 + 7.42 0.000 Intergenic Intergenic 68668 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr11-7466 chr11 128874157 128874367 + 7.42 0.000 Intergenic Intergenic -6889 NM_153766 3758 Hs.527830 NM_000220 ENSG00000151704 KCNJ1 KIR1.1|ROMK|ROMK1 potassium voltage-gated channel subfamily J member 1 protein-coding chr9-3119 chr9 77440284 77440494 + 7.42 0.000 intron (NM_004297, intron 2 of 6) intron (NM_004297, intron 2 of 6) -7260 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr1-14551 chr1 52345821 52346031 + 7.42 0.000 intron (NM_007324, intron 17 of 17) intron (NM_007324, intron 17 of 17) 20279 NM_001330585 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr6-5114 chr6 120234402 120234612 + 7.42 0.000 Intergenic L1M2|LINE|L1 219328 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr3-10977 chr3 177878859 177879069 + 7.42 0.000 intron (NR_110826, intron 1 of 2) intron (NR_110826, intron 1 of 2) 62099 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr7-7239 chr7 26237234 26237444 + 7.42 0.000 Intergenic Intergenic 35594 NM_016587 11335 Hs.381189 NM_007276 ENSG00000122565 CBX3 HECH|HP1-GAMMA|HP1Hs-gamma chromobox 3 protein-coding chr19-5891 chr19 46893971 46894181 + 7.42 0.000 intron (NM_004491, intron 1 of 6) intron (NM_004491, intron 1 of 6) 33079 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr8-5519 chr8 63874964 63875174 + 7.42 0.000 intron (NR_125826, intron 4 of 4) L1MA4|LINE|L1 105639 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr3-10484 chr3 135114369 135114579 + 7.42 0.000 intron (NM_004441, intron 4 of 15) AluSx4|SINE|Alu 319214 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr12-6735 chr12 5736526 5736736 + 7.42 0.000 intron (NM_001278596, intron 13 of 25) intron (NM_001278596, intron 13 of 25) 208628 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr5-4017 chr5 33227303 33227513 + 7.42 0.000 Intergenic Intergenic -2327 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr18-1394 chr18 58963824 58964034 + 7.42 0.000 intron (NR_148459, intron 9 of 11) intron (NR_148459, intron 9 of 11) -71750 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr10-5091 chr10 46047155 46047365 + 7.42 0.000 promoter-TSS (NM_002443) promoter-TSS (NM_002443) -991 NM_002443 4477 Hs.255462 NM_002443 ENSG00000263639 MSMB HPC13|IGBF|MSP|MSPB|PN44|PRPS|PSP|PSP-94|PSP57|PSP94 microseminoprotein beta protein-coding chr6-6244 chr6 27837220 27837430 + 7.42 0.000 TTS (NM_003510) TTS (NM_003510) 1014 NM_003510 8330 Hs.734717 NM_003510 ENSG00000275221 HIST1H2AK H2A/d|H2AFD histone cluster 1 H2A family member k protein-coding chr17-5031 chr17 1877384 1877594 + 7.42 0.000 intron (NM_001355120, intron 8 of 16) intron (NM_001355120, intron 8 of 16) 47484 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr17-8662 chr17 82154888 82155098 + 7.42 0.000 3' UTR (NM_001316321, exon 15 of 15) 3' UTR (NM_001316321, exon 15 of 15) -56757 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr20-2610 chr20 40255436 40255646 + 7.42 0.000 Intergenic Intergenic 251080 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr20-3645 chr20 9484774 9484984 + 7.42 0.000 Intergenic MER87B|LTR|ERV1 -29479 NM_001199897 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chr8-6901 chr8 101708250 101708460 + 7.42 0.000 intron (NM_001040624, intron 6 of 7) intron (NM_001040624, intron 6 of 7) 82614 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr12-5370 chr12 119727432 119727642 + 7.42 0.000 intron (NM_007174, intron 27 of 46) L1PB3|LINE|L1 -13813 NR_031589 100302274 NR_031589 ENSG00000283768 MIR1178 MIRN1178|hsa-mir-1178 microRNA 1178 ncRNA chr1-14200 chr1 34468069 34468279 + 7.42 0.000 Intergenic L2c|LINE|L2 201520 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr2-13197 chr2 121284155 121284365 + 7.42 0.000 intron (NM_014553, intron 1 of 14) intron (NM_014553, intron 1 of 14) 942 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr13-3302 chr13 51028189 51028399 + 7.42 0.000 non-coding (NR_003923, exon 6 of 17) non-coding (NR_003923, exon 6 of 17) 37863 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr2-6847 chr2 70937200 70937410 + 7.42 0.000 intron (NM_001692, intron 1 of 13) intron (NM_001692, intron 1 of 13) 1405 NM_001692 525 Hs.64173 NM_001692 ENSG00000116039 ATP6V1B1 ATP6B1|RTA1B|VATB|VMA2|VPP3 ATPase H+ transporting V1 subunit B1 protein-coding chr20-3961 chr20 34553425 34553635 + 7.42 0.000 intron (NM_181509, intron 2 of 4) intron (NM_181509, intron 2 of 4) -5188 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr4-5852 chr4 114129455 114129665 + 7.42 0.000 Intergenic L1PBa|LINE|L1 -149913 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr16-6815 chr16 80615708 80615918 + 7.42 0.000 intron (NM_152342, intron 4 of 6) intron (NM_152342, intron 4 of 6) -43005 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr16-3737 chr16 11401372 11401582 + 7.42 0.000 intron (NM_001370704, intron 49 of 66) intron (NM_001370704, intron 49 of 66) 56018 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr7-4121 chr7 50766893 50767103 + 7.42 0.000 intron (NM_001001555, intron 1 of 16) intron (NM_001001555, intron 1 of 16) 15898 NM_001350814 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chrX-2695 chrX 119605318 119605528 + 7.42 0.000 intron (NM_001173487, intron 1 of 3) intron (NM_001173487, intron 1 of 3) 458 NM_017544 55922 Hs.437084 NM_017544 ENSG00000186416 NKRF ITBA4|NRF NFKB repressing factor protein-coding chr19-2414 chr19 32351955 32352165 + 7.42 0.000 intron (NM_001136156, intron 2 of 6) intron (NM_001136156, intron 2 of 6) 6450 NM_001136156 22847 Hs.205392 NM_014910 ENSG00000168813 ZNF507 - zinc finger protein 507 protein-coding chr4-3675 chr4 41796558 41796768 + 7.42 0.000 Intergenic Intergenic -47693 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding chr7-3049 chr7 128531285 128531495 + 7.42 0.000 Intergenic CpG 54661 NM_018396 55798 Hs.433213 NM_018396 ENSG00000165055 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding chr19-4648 chr19 16051647 16051857 + 7.42 0.000 Intergenic MER51E|LTR|ERV1 -13935 NR_146442 105372292 Hs.635664 NR_146442 ENSG00000267517 LINC01855 - long intergenic non-protein coding RNA 1855 ncRNA chr10-7182 chr10 107143012 107143222 + 7.42 0.000 intron (NM_001206569, intron 1 of 25) intron (NM_001206569, intron 1 of 25) 21589 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr22-1657 chr22 39254885 39255095 + 7.42 0.000 Intergenic Intergenic -10008 NM_002608 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr10-3989 chr10 125221772 125221982 + 7.42 0.000 Intergenic Intergenic -60847 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr19-6864 chr19 44284854 44285064 + 7.42 0.000 Intergenic LTR38|LTR|ERV1 20066 NM_004234 9310 Hs.613424 NM_004234 ENSG00000159917 ZNF235 ANF270|HZF6|ZFP93|ZNF270 zinc finger protein 235 protein-coding chr5-8109 chr5 97511627 97511837 + 7.42 0.000 intron (NR_105028, intron 1 of 3) MER4A1|LTR|ERV1 7036 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr11-8513 chr11 124220211 124220421 + 7.42 0.000 Intergenic MER5A1|DNA|hAT-Charlie -4323 NM_001291438 26492 Hs.381319 NM_001291438 OR8G2P HSTPCR120|OR8G2|OR8G4|ORL206|ORL486|TPCR120 olfactory receptor family 8 subfamily G member 2 pseudogene protein-coding chr2-9351 chr2 227155568 227155778 + 7.42 0.000 intron (NM_000092, intron 1 of 47) intron (NM_000092, intron 1 of 47) 8886 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr9-3925 chr9 135083905 135084115 + 7.42 0.000 intron (NM_014279, intron 1 of 5) intron (NM_014279, intron 1 of 5) -3250 NM_001282612 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr9-8184 chr9 107039991 107040201 + 7.42 0.000 intron (NR_126029, intron 4 of 4) L2a|LINE|L2 62892 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr5-4653 chr5 36045779 36045989 + 7.42 0.000 intron (NR_031764, intron 3 of 5) L1MA3|LINE|L1 20998 NM_174914 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr3-8215 chr3 46953912 46954122 + 7.42 0.000 intron (NM_144716, intron 2 of 7) intron (NM_144716, intron 2 of 7) 22484 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr11-5242 chr11 26761650 26761860 + 7.42 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -39695 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr17-4171 chr17 3460840 3461050 + 7.42 0.000 intron (NM_001321336, intron 5 of 8) intron (NM_001321336, intron 5 of 8) 10802 NM_032598 84690 Hs.351068 NM_032598 ENSG00000141255 SPATA22 NYD-SP20|NYDSP20 spermatogenesis associated 22 protein-coding chr2-13272 chr2 127662875 127663085 + 7.42 0.000 intron (NM_001161404, intron 1 of 9) intron (NM_001161404, intron 1 of 9) 1613 NM_017980 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr3-10316 chr3 126689257 126689467 + 7.42 0.000 Intergenic L1PB1|LINE|L1 -14878 NM_001320610 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr11-9769 chr11 69400497 69400707 + 7.42 0.000 Intergenic Intergenic -25053 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr7-9198 chr7 116363773 116363983 + 7.42 0.000 Intergenic Intergenic -77151 NR_130922 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr6-2416 chr6 156082965 156083175 + 7.42 0.000 Intergenic AluSc8|SINE|Alu 136273 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr4-8015 chr4 117290539 117290749 + 7.42 0.000 Intergenic Intergenic 69995 NR_147151 105377389 Hs.129401 NR_147151 ENSG00000224932 LINC02262 - long intergenic non-protein coding RNA 2262 ncRNA chr8-3275 chr8 19414207 19414417 + 7.42 0.000 intron (NR_148900, intron 7 of 9) intron (NR_148900, intron 7 of 9) 100336 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr11-8170 chr11 61955854 61956064 + 7.42 0.000 intron (NR_134580, intron 4 of 10) CpG-4326 724 NM_001363591 7439 Hs.524910 NM_004183 ENSG00000167995 BEST1 ARB|BEST|BMD|Best1V1Delta2|RP50|TU15B|VMD2 bestrophin 1 protein-coding chr7-5755 chr7 74718482 74718692 + 7.42 0.000 intron (NM_001163636, intron 11 of 33) intron (NM_001163636, intron 11 of 33) 10331 NR_110044 101926943 Hs.654772 NR_110044 ENSG00000232729 LOC101926943 - uncharacterized LOC101926943 ncRNA chr13-3581 chr13 27245730 27245940 + 7.42 0.000 Intergenic Intergenic -5720 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr12-5004 chr12 80422377 80422587 + 7.42 0.000 Intergenic Intergenic -21753 NM_001145026 374462 Hs.539284 NM_001145026 ENSG00000139304 PTPRQ DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q protein tyrosine phosphatase receptor type Q protein-coding chr20-3436 chr20 46581757 46581967 + 7.42 0.000 intron (NM_001193340, intron 9 of 12) intron (NM_001193340, intron 9 of 12) -31208 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr12-3056 chr12 5942930 5943140 + 7.42 0.000 intron (NM_001278597, intron 1 of 25) L1PB2|LINE|L1 2224 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr3-8526 chr3 139658192 139658402 + 7.42 0.000 intron (NM_178177, intron 1 of 4) intron (NM_178177, intron 1 of 4) 19675 NM_001320510 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr12-6288 chr12 49645662 49645872 + 7.42 0.000 3' UTR (NM_198900, exon 25 of 25) 3' UTR (NM_198900, exon 25 of 25) 15223 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr2-11280 chr2 182414041 182414251 + 7.42 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) 12902 NM_001363871 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr20-2723 chr20 49064550 49064760 + 7.42 0.000 intron (NM_001362762, intron 3 of 24) AluJb|SINE|Alu 18343 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr15-5065 chr15 85632870 85633080 + 7.42 0.000 intron (NM_001270546, intron 1 of 28) AluSc5|SINE|Alu 13025 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr1-8115 chr1 9390838 9391048 + 7.42 0.000 Intergenic MER4E1|LTR|ERV1 37973 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr16-4812 chr16 86286570 86286780 + 7.42 0.000 promoter-TSS (NR_104139) promoter-TSS (NR_104139) 244 NR_038438 146513 Hs.434338 NR_038438 ENSG00000268532 LINC02135 - long intergenic non-protein coding RNA 2135 ncRNA chr3-3731 chr3 188037218 188037428 + 7.42 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -60916 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr20-3644 chr20 9474803 9475013 + 7.42 0.000 intron (NM_182797, intron 35 of 35) intron (NM_182797, intron 35 of 35) -39450 NM_001199897 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chrX-1174 chrX 50880623 50880833 + 7.42 0.000 Intergenic MLT1A-int|LTR|ERVL-MaLR -30007 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr19-6436 chr19 15647862 15648072 + 7.42 0.000 intron (NM_001369696, intron 4 of 11) MLT1H|LTR|ERVL-MaLR 6655 NM_001369696 4051 Hs.106242 NM_000896 ENSG00000186529 CYP4F3 CPF3|CYP4F|CYPIVF3|LTB4H cytochrome P450 family 4 subfamily F member 3 protein-coding chr6-4886 chr6 90574822 90575032 + 7.42 0.000 intron (NM_145331, intron 1 of 16) intron (NM_145331, intron 1 of 16) 12145 NM_145332 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr6-3876 chr6 52557360 52557570 + 7.42 0.000 intron (NM_012288, intron 1 of 10) MIR|SINE|MIR 19595 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr3-8077 chr3 10486133 10486343 + 7.42 0.000 intron (NM_001353564, intron 2 of 20) MIRb|SINE|MIR 19346 NM_001363862 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr13-1855 chr13 113045942 113046152 + 7.42 0.000 intron (NM_001366646, intron 2 of 27) intron (NM_001366646, intron 2 of 27) 1401 NM_001366646 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr2-5716 chr2 215790624 215790834 + 7.42 0.000 intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 52807 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr6-8134 chr6 129153540 129153750 + 7.42 0.000 intron (NM_000426, intron 7 of 64) MIR|SINE|MIR 270504 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr5-6626 chr5 41664385 41664595 + 7.42 0.000 Intergenic HERVL-int|LTR|ERVL -153889 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding chr10-7228 chr10 120678135 120678345 + 7.42 0.000 Intergenic Intergenic 80291 NR_103717 404216 Hs.196578 NM_001012711 ENSG00000177234 LINC01561 C10orf85 long intergenic non-protein coding RNA 1561 ncRNA chr3-7838 chr3 111399427 111399637 + 7.42 0.000 Intergenic THE1C|LTR|ERVL-MaLR -142665 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr16-5804 chr16 89985167 89985377 + 7.42 0.000 intron (NR_003227, intron 6 of 9) intron (NR_003227, intron 6 of 9) -12440 NM_145039 92806 Hs.513832 NM_145039 ENSG00000177946 CENPBD1 - CENPB DNA-binding domain containing 1 protein-coding chr22-2549 chr22 26159057 26159267 + 7.42 0.000 Intergenic Intergenic -10300 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr2-6663 chr2 10327777 10327987 + 7.42 0.000 intron (NM_134421, intron 1 of 5) Eulor9B|DNA|DNA -2281 NM_001258357 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr12-6044 chr12 111936582 111936792 + 7.42 0.000 intron (NR_122119, intron 6 of 8) intron (NR_122119, intron 6 of 8) 37624 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo chr19-5036 chr19 48733328 48733538 + 7.42 0.000 intron (NM_017805, intron 4 of 11) intron (NM_017805, intron 4 of 11) 7177 NM_017805 54922 Hs.233955 NM_017805 ENSG00000105538 RASIP1 RAIN Ras interacting protein 1 protein-coding chrX-3569 chrX 71578736 71578946 + 7.42 0.000 intron (NM_052957, intron 1 of 12) intron (NM_052957, intron 1 of 12) 817 NM_052957 93953 Hs.135167 NM_052957 ENSG00000147174 GCNA ACRC|NAAR1 germ cell nuclear acidic peptidase protein-coding chr15-3134 chr15 66563120 66563330 + 7.42 0.000 intron (NM_001278562, intron 3 of 11) MLT1A1|LTR|ERVL-MaLR 2272 NM_207338 197021 Hs.680983 NM_207338 ENSG00000188501 LCTL KLG|KLPH lactase like protein-coding chr10-7078 chr10 90204448 90204658 + 7.42 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -247180 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr6-7491 chr6 62861331 62861541 + 7.42 0.000 Intergenic SATR1|Satellite|Satellite 458541 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr18-1575 chr18 34650123 34650333 + 7.42 0.000 intron (NM_001198939, intron 1 of 21) intron (NM_001198939, intron 1 of 21) 56893 NM_001198939 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr1-16417 chr1 225905894 225906104 + 7.42 0.000 Intergenic Intergenic 16143 NR_106799 102466270 NR_106799 ENSG00000284519 MIR6741 hsa-mir-6741 microRNA 6741 ncRNA chr18-1511 chr18 3603701 3603911 + 7.42 0.000 promoter-TSS (NR_119377) promoter-TSS (NR_119377) 69 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr8-5907 chr8 17410307 17410517 + 7.42 0.000 intron (NM_004686, intron 1 of 13) intron (NM_004686, intron 1 of 13) 2939 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr11-9375 chr11 49863987 49864197 + 7.42 0.000 Intergenic L1ME4a|LINE|L1 -88299 NM_001001955 283092 Hs.553668 NM_001001955 ENSG00000258817 OR4C13 - olfactory receptor family 4 subfamily C member 13 protein-coding chr15-3070 chr15 62319411 62319621 + 7.42 0.000 Intergenic LTR16A2|LTR|ERVL -14782 NR_107034 102465869 NR_107034 ENSG00000277919 MIR8067 hsa-mir-8067 microRNA 8067 ncRNA chr22-2643 chr22 34605517 34605727 + 7.42 0.000 Intergenic MSTA|LTR|ERVL-MaLR 392294 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr9-7706 chr9 72720318 72720528 + 7.42 0.000 intron (NM_138691, intron 8 of 23) LTR102_Mam|LTR|ERVL 153686 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr4-3785 chr4 101022067 101022277 + 7.42 0.000 Intergenic Intergenic 218700 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr2-13158 chr2 119645492 119645702 + 7.42 0.000 intron (NR_073132, intron 22 of 24) intron (NR_073132, intron 22 of 24) -33570 NM_001105198 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr7-3908 chr7 120497753 120497963 + 7.42 0.000 intron (NM_012281, intron 1 of 5) MLT1J|LTR|ERVL-MaLR 224683 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr13-3026 chr13 21588488 21588698 + 7.42 0.000 intron (NM_152726, intron 1 of 11) HERVIP10FH-int|LTR|ERV1 15577 NM_152726 221154 Hs.412103 NM_152726 ENSG00000165487 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding chr4-8612 chr4 172091238 172091448 + 7.42 0.000 intron (NM_001034845, intron 2 of 12) LTR49-int|LTR|ERV1 -277736 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr9-8369 chr9 117725807 117726017 + 7.42 0.000 Intergenic L1PBa1|LINE|L1 21509 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr16-4637 chr16 73426023 73426233 + 7.42 0.000 Intergenic Intergenic 39323 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr11-6486 chr11 68096033 68096243 + 7.42 0.000 intron (NM_001277, intron 2 of 11) AluSq2|SINE|Alu 25250 NM_001277 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr8-3603 chr8 142246446 142246656 + 7.42 0.000 intron (NM_001366901, intron 12 of 13) MIRc|SINE|MIR 48195 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr16-3555 chr16 56058597 56058807 + 7.42 0.000 Intergenic MER94|DNA|hAT-Blackjack -102671 NM_001190158 221223 Hs.350800 NM_145024 ENSG00000159398 CES5A CAUXIN|CES4C1|CES5|CES7|HEL126 carboxylesterase 5A protein-coding chr3-6732 chr3 138304612 138304822 + 7.42 0.000 intron (NM_001349018, intron 9 of 10) intron (NM_001349018, intron 9 of 10) 25134 NM_001349020 347736 Hs.660992 NM_178130 ENSG00000181322 NME9 NM23-H9|TXL-2|TXL2|TXNDC6 NME/NM23 family member 9 protein-coding chr5-7104 chr5 180377593 180377803 + 7.42 0.000 Intergenic Intergenic -24362 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr5-3672 chr5 167922350 167922560 + 7.42 0.000 intron (NM_001368145, intron 2 of 26) intron (NM_001368145, intron 2 of 26) 167526 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr1-10565 chr1 173846409 173846619 + 7.42 0.000 intron (NM_001365212, intron 12 of 15) AluJo|SINE|Alu -16734 NR_037605 100506046 Hs.656411 NR_037605 GAS5-AS1 - GAS5 antisense RNA 1 ncRNA chr16-2663 chr16 66250473 66250683 + 7.42 0.000 Intergenic MER33|DNA|hAT-Charlie -116113 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr20-2373 chr20 17192131 17192341 + 7.42 0.000 Intergenic L1MEc|LINE|L1 -33871 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr4-8267 chr4 140653756 140653966 + 7.42 0.000 intron (NM_015130, intron 13 of 20) intron (NM_015130, intron 13 of 20) -10781 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr9-4863 chr9 2426268 2426478 + 7.42 0.000 Intergenic Intergenic -195414 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr11-9104 chr11 32449898 32450108 + 7.42 0.000 intron (NR_120548, intron 1 of 4) intron (NR_120548, intron 1 of 4) 13964 NR_120546 51352 Hs.567499 NM_015855 ENSG00000183242 WT1-AS WIT-1|WIT1|WT1-AS1|WT1AS WT1 antisense RNA ncRNA chr9-3144 chr9 100875530 100875740 + 7.42 0.000 Intergenic AluY|SINE|Alu -153092 NM_207299 54886 Hs.382683 NM_017753 ENSG00000148123 PLPPR1 LPPR1|PRG-3 phospholipid phosphatase related 1 protein-coding chr2-8424 chr2 119076266 119076476 + 7.42 0.000 Intergenic Intergenic 82380 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr2-8254 chr2 99715994 99716204 + 7.42 0.000 intron (NM_001025108, intron 10 of 23) intron (NM_001025108, intron 10 of 23) -226082 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr18-3268 chr18 51039009 51039219 + 7.42 0.000 intron (NM_005359, intron 1 of 11) AluSz6|SINE|Alu 8901 NM_005359 4089 Hs.75862 NM_005359 ENSG00000141646 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding chr1-12889 chr1 110545996 110546206 + 7.42 0.000 Intergenic AluSz|SINE|Alu -26926 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr7-8745 chr7 77197543 77197753 + 7.42 0.000 intron (NM_006682, intron 1 of 1) intron (NM_006682, intron 1 of 1) 2171 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding chr22-3188 chr22 35191618 35191828 + 7.42 0.000 intron (NR_126356, intron 2 of 5) MER68|LTR|ERVL 39333 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA chrX-5310 chrX 143976551 143976761 + 7.42 0.000 Intergenic Intergenic 92585 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr10-7118 chr10 98425599 98425809 + 7.42 0.000 exon (NM_001322477, exon 13 of 20) exon (NM_001322477, exon 13 of 20) 5656 NR_039833 100616482 NR_039833 ENSG00000264610 MIR4685 - microRNA 4685 ncRNA chr8-2307 chr8 140608525 140608735 + 7.42 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 27003 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr2-14049 chr2 195633125 195633335 + 7.42 0.000 Intergenic LTR1D1|LTR|ERV1 -23728 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr7-9475 chr7 135240442 135240652 + 7.42 0.000 exon (NM_182489, exon 2 of 9) exon (NM_182489, exon 2 of 9) 8568 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr11-6861 chr11 100629711 100629921 + 7.42 0.000 Intergenic Intergenic -57472 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr11-10740 chr11 132663193 132663403 + 7.42 0.000 intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 280339 NM_002545 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr6-2706 chr6 43186249 43186459 + 7.42 0.000 exon (NM_015089, exon 4 of 41) exon (NM_015089, exon 4 of 41) 4158 NM_015089 23113 Hs.485434 NM_015089 ENSG00000112659 CUL9 H7AP1|PARC cullin 9 protein-coding chr14-4894 chr14 72273378 72273588 + 7.42 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) -243337 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr6-6809 chr6 6666794 6667004 + 7.42 0.000 Intergenic Intergenic -44073 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr9-3864 chr9 132473423 132473633 + 7.42 0.000 intron (NM_001282957, intron 1 of 5) intron (NM_001282957, intron 1 of 5) 63317 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr9-6835 chr9 40878455 40878665 + 7.42 0.000 Intergenic L1PA2|LINE|L1 50532 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr12-8074 chr12 116925897 116926107 + 7.42 0.000 intron (NM_153348, intron 1 of 10) intron (NM_153348, intron 1 of 10) 15046 NM_012174 26259 Hs.624537 NM_012174 ENSG00000174989 FBXW8 FBW6|FBW8|FBX29|FBXO29|FBXW6 F-box and WD repeat domain containing 8 protein-coding chr11-8981 chr11 21535608 21535818 + 7.42 0.000 intron (NM_001288713, intron 17 of 20) MIR|SINE|MIR -657372 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr16-2057 chr16 70779818 70780028 + 7.42 0.000 intron (NM_001351157, intron 8 of 17) AluJo|SINE|Alu 21235 NM_001351157 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|TAX1BP2|TRX VAC14 component of PIKFYVE complex protein-coding chr19-3883 chr19 35329503 35329713 + 7.42 0.000 intron (NM_001278417, intron 1 of 12) intron (NM_001278417, intron 1 of 12) 421 NM_001771 933 Hs.579691 NM_001771 ENSG00000012124 CD22 SIGLEC-2|SIGLEC2 CD22 molecule protein-coding chr5-6081 chr5 10607714 10607924 + 7.42 0.000 intron (NM_001164440, intron 1 of 3) intron (NM_001164440, intron 1 of 3) 43749 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr5-4506 chr5 11397065 11397275 + 7.42 0.000 exon (NM_001332, exon 6 of 22) exon (NM_001332, exon 6 of 22) 191747 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr17-6546 chr17 40296510 40296720 + 7.42 0.000 intron (NM_001254, intron 8 of 11) intron (NM_001254, intron 8 of 11) 8736 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding chr14-3349 chr14 90344327 90344537 + 7.42 0.000 Intergenic Intergenic -12491 NM_017970 55051 Hs.528131 NM_017970 ENSG00000119720 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding chr8-3170 chr8 95967227 95967437 + 7.42 0.000 Intergenic HAL1|LINE|L1 -18984 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr4-3469 chr4 114606441 114606651 + 7.42 0.000 intron (NM_001322114, intron 1 of 5) intron (NM_001322114, intron 1 of 5) 7261 NM_001322114 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr14-4859 chr14 70093168 70093378 + 7.42 0.000 intron (NM_033262, intron 2 of 7) intron (NM_033262, intron 2 of 7) -13056 NM_001130417 6547 Hs.337696 NM_033262 ENSG00000100678 SLC8A3 NCX3 solute carrier family 8 member A3 protein-coding chr5-6744 chr5 78650719 78650929 + 7.42 0.000 Intergenic Intergenic -2052 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr16-5073 chr16 77038284 77038494 + 7.42 0.000 Intergenic L1MA2|LINE|L1 -152801 NM_014940 22879 Hs.513743 NM_014940 ENSG00000103111 MON1B HSRG1|SAND2|SRG1 MON1 homolog B, secretory trafficking associated protein-coding chr3-3239 chr3 39177847 39178057 + 7.42 0.000 Intergenic Intergenic 14643 NM_194293 165904 Hs.447868 NM_194293 ENSG00000168334 XIRP1 CMYA1|Xin xin actin binding repeat containing 1 protein-coding chr2-13176 chr2 120484513 120484723 + 7.42 0.000 Intergenic Intergenic -18269 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr10-7373 chr10 2432617 2432827 + 7.42 0.000 Intergenic Intergenic 68740 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr16-5090 chr16 85071167 85071377 + 7.42 0.000 intron (NM_001286566, intron 2 of 11) intron (NM_001286566, intron 2 of 11) 8060 NM_001286565 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chr9-6407 chr9 36726175 36726385 + 7.42 0.000 Intergenic Intergenic 97319 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr1-12387 chr1 7536518 7536728 + 7.42 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -133107 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr2-6820 chr2 60746379 60746589 + 7.42 0.000 Intergenic LTR18B|LTR|ERVL -9784 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr20-3729 chr20 17559575 17559785 + 7.42 0.000 promoter-TSS (NM_001278606) promoter-TSS (NM_001278606) -847 NM_001278607 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr20-2661 chr20 44681891 44682101 + 7.42 0.000 Intergenic MIR|SINE|MIR -10257 NR_034104 79015 Hs.671450 NM_024049 ENSG00000283440 LINC01260 - long intergenic non-protein coding RNA 1260 ncRNA chr7-2992 chr7 23672232 23672442 + 7.42 0.000 Intergenic L2c|LINE|L2 -7862 NM_001300932 340277 Hs.592178 NM_199136 ENSG00000188732 FAM221A C7orf46 family with sequence similarity 221 member A protein-coding chr10-9250 chr10 133401550 133401760 + 7.42 0.000 intron (NM_138384, intron 7 of 10) intron (NM_138384, intron 7 of 10) 7498 NM_138384 92170 Hs.501578 NM_138384 ENSG00000148824 MTG1 GTP|GTPBP7 mitochondrial ribosome associated GTPase 1 protein-coding chr16-3471 chr16 1758877 1759087 + 7.42 0.000 exon (NM_001318852, exon 10 of 32) exon (NM_001318852, exon 10 of 32) 12727 NM_002513 4832 Hs.514065 NM_002513 ENSG00000103024 NME3 DR-nm23|NDPK-C|NDPKC|NM23-H3|NM23H3|c371H6.2 NME/NM23 nucleoside diphosphate kinase 3 protein-coding chr1-7146 chr1 205021007 205021217 + 7.42 0.000 3' UTR (NM_015090, exon 27 of 27) 3' UTR (NM_015090, exon 27 of 27) -21837 NM_001346083 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr3-2926 chr3 53257426 53257636 + 7.42 0.000 Intergenic Intergenic -1417 NR_047580 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr3-11157 chr3 189365816 189366026 + 7.42 0.000 Intergenic Intergenic -125327 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chrX-5195 chrX 134260434 134260644 + 7.42 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 23326 NM_001353453 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr12-6430 chr12 84353686 84353896 + 7.42 0.000 Intergenic Intergenic 559008 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr5-7537 chr5 38043901 38044111 + 7.42 0.000 intron (NR_147009, intron 2 of 2) L1ME3|LINE|L1 18309 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr6-4565 chr6 42443843 42444053 + 7.42 0.000 intron (NM_001297573, intron 2 of 17) MIRc|SINE|MIR 8103 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr10-6249 chr10 71695175 71695385 + 7.42 0.000 intron (NM_022124, intron 20 of 67) intron (NM_022124, intron 20 of 67) 24498 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr1-14044 chr1 27650880 27651090 + 7.42 0.000 Intergenic MIRb|SINE|MIR 11737 NR_151722 111216282 Hs.297628 NR_151722 ENSG00000233975 LINC02574 - long intergenic non-protein coding RNA 2574 ncRNA chr10-8133 chr10 70272746 70272956 + 7.42 0.000 intron (NM_022146, intron 1 of 3) intron (NM_022146, intron 1 of 3) 11153 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr9-7671 chr9 69531570 69531780 + 7.42 0.000 intron (NM_001163, intron 1 of 12) intron (NM_001163, intron 1 of 12) 140696 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr2-11926 chr2 25127874 25128084 + 7.42 0.000 intron (NM_014971, intron 5 of 22) intron (NM_014971, intron 5 of 22) 40601 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr3-7948 chr3 159404533 159404743 + 7.42 0.000 intron (NM_001197108, intron 1 of 6) L1MA3|LINE|L1 121992 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr10-7705 chr10 30188305 30188515 + 7.42 0.000 Intergenic Intergenic -23442 NR_120653 101929279 Hs.559153 NR_120653 LOC101929279 - uncharacterized LOC101929279 ncRNA chr4-6287 chr4 82080900 82081110 + 7.42 0.000 Intergenic L1PA16|LINE|L1 292986 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr1-10418 chr1 157646180 157646390 + 7.42 0.000 Intergenic L2c|LINE|L2 -48200 NM_031282 83417 Hs.120260 NM_031282 ENSG00000163518 FCRL4 CD307d|FCRH4|IGFP2|IRTA1 Fc receptor like 4 protein-coding chr16-2304 chr16 13855926 13856136 + 7.42 0.000 Intergenic MIR3|SINE|MIR -64126 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr17-8169 chr17 61367174 61367384 + 7.42 0.000 intron (NR_136397, intron 1 of 2) intron (NR_136397, intron 1 of 2) 425 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr1-13404 chr1 1963750 1963960 + 7.42 0.000 exon (NM_001304360, exon 14 of 39) exon (NM_001304360, exon 14 of 39) 39931 NM_001304360 85452 Hs.232092 NM_001003808 ENSG00000142609 CFAP74 C1orf222|KIAA1751 cilia and flagella associated protein 74 protein-coding chr13-3767 chr13 43623025 43623235 + 7.42 0.000 intron (NM_001127615, intron 1 of 16) L1PB1|LINE|L1 6347 NM_001127615 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr7-7043 chr7 138786060 138786270 + 7.42 0.000 5' UTR (NM_020632, exon 2 of 22) 5' UTR (NM_020632, exon 2 of 22) -11829 NM_001085429 155006 Hs.567729 NM_001085429 ENSG00000214128 TMEM213 - transmembrane protein 213 protein-coding chr13-3971 chr13 63279422 63279632 + 7.42 0.000 intron (NR_126409, intron 2 of 6) MER44A|DNA|TcMar-Tigger 48567 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr5-8819 chr5 150238947 150239157 + 7.42 0.000 intron (NM_001369025, intron 13 of 17) intron (NM_001369025, intron 13 of 17) 48990 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr2-5015 chr2 227163719 227163929 + 7.42 0.000 promoter-TSS (NM_000091) promoter-TSS (NM_000091) 735 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr8-3099 chr8 30299599 30299809 + 7.42 0.000 Intergenic Intergenic -84797 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr6-3956 chr6 95648663 95648873 + 7.42 0.000 Intergenic L1PA11|LINE|L1 71233 NM_024641 79694 Hs.734632 NM_024641 ENSG00000172469 MANEA ENDO|hEndo mannosidase endo-alpha protein-coding chr6-8515 chr6 159106876 159107086 + 7.42 0.000 Intergenic MER51E|LTR|ERV1 -61829 NM_152133 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chr5-8944 chr5 159279401 159279611 + 7.42 0.000 intron (NM_145049, intron 9 of 10) intron (NM_145049, intron 9 of 10) 16216 NM_145049 134510 Hs.591733 NM_145049 ENSG00000164332 UBLCP1 CPUB1 ubiquitin like domain containing CTD phosphatase 1 protein-coding chr1-12557 chr1 29363117 29363327 + 7.42 0.000 Intergenic L2b|LINE|L2 -13108 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chrX-2334 chrX 57378284 57378494 + 7.42 0.000 intron (NR_148564, intron 5 of 11) intron (NR_148564, intron 5 of 11) 91535 NR_148564 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding chr1-7204 chr1 215567828 215568038 + 7.42 0.000 intron (NM_001319294, intron 1 of 17) intron (NM_001319294, intron 1 of 17) 629 NM_001319294 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr5-7425 chr5 28870891 28871101 + 7.42 0.000 Intergenic L1MC1|LINE|L1 -55874 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo chr14-2749 chr14 101603495 101603705 + 7.42 0.000 Intergenic Intergenic 42249 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr11-10179 chr11 94283671 94283881 + 7.42 0.000 Intergenic Intergenic -21861 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr3-7831 chr3 107506247 107506457 + 7.42 0.000 Intergenic L2c|LINE|L2 -16610 NM_020235 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr7-6495 chr7 9018142 9018352 + 7.42 0.000 Intergenic HERV17-int|LTR|ERV1 584638 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr10-3739 chr10 118421742 118421952 + 7.42 0.000 Intergenic Intergenic 64739 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr20-2685 chr20 46218386 46218596 + 7.42 0.000 intron (NM_021248, intron 4 of 11) intron (NM_021248, intron 4 of 11) 90007 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr5-7919 chr5 77915908 77916118 + 7.42 0.000 intron (NR_105012, intron 1 of 1) intron (NR_105012, intron 1 of 1) 31357 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr22-3282 chr22 47002778 47002988 + 7.42 0.000 intron (NM_001284305, intron 10 of 12) intron (NM_001284305, intron 10 of 12) -86841 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr11-6258 chr11 57498855 57499065 + 7.42 0.000 intron (NM_001198810, intron 5 of 14) MIR3|SINE|MIR 15949 NM_001198810 8501 Hs.591952 NM_003627 ENSG00000149150 SLC43A1 LAT3|PB39|POV1|R00504 solute carrier family 43 member 1 protein-coding chr12-6445 chr12 90299191 90299401 + 7.42 0.000 intron (NR_135018, intron 2 of 2) intron (NR_135018, intron 2 of 2) 5978 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr8-4325 chr8 99902473 99902683 + 7.42 0.000 Intergenic L1PA7|LINE|L1 -8871 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr4-8244 chr4 139191609 139191819 + 7.42 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -14496 NM_001371336 chr5-3023 chr5 10595964 10596174 + 7.42 0.000 intron (NM_001164440, intron 1 of 3) intron (NM_001164440, intron 1 of 3) 31999 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr4-5995 chr4 186069257 186069467 + 7.42 0.000 intron (NM_003265, intron 1 of 4) intron (NM_003265, intron 1 of 4) 207 NM_003265 7098 Hs.657724 NM_003265 ENSG00000164342 TLR3 CD283|IIAE2 toll like receptor 3 protein-coding chr2-10252 chr2 118614955 118615165 + 7.42 0.000 Intergenic Intergenic -12094 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr5-4677 chr5 38082581 38082791 + 7.42 0.000 intron (NR_147009, intron 2 of 2) Tigger1|DNA|TcMar-Tigger 56989 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr10-8403 chr10 84132244 84132454 + 7.42 0.000 Intergenic ERVL-E-int|LTR|ERVL -7160 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr7-9635 chr7 150972224 150972434 + 7.42 0.000 intron (NM_172056, intron 2 of 8) intron (NM_172056, intron 2 of 8) 5985 NM_000238 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chrX-3514 chrX 46310395 46310605 + 7.42 0.000 Intergenic Intergenic 17174 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr3-8932 chr3 13599122 13599332 + 7.42 0.000 intron (NM_001004019, intron 2 of 17) L2a|LINE|L2 -19154 NR_132775 106635526 NR_132775 SNORA93 - small nucleolar RNA, H/ACA box 93 snoRNA chr7-7577 chr7 123075823 123076033 + 7.42 0.000 Intergenic Intergenic -80228 NM_016945 50833 Hs.272395 NM_016945 ENSG00000128519 TAS2R16 BGLPT|T2R16 taste 2 receptor member 16 protein-coding chr11-10651 chr11 126702483 126702693 + 7.42 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) 46502 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr3-7120 chr3 183591265 183591475 + 7.42 0.000 Intergenic AluSx1|SINE|Alu -35664 NM_130446 89857 Hs.659147 NM_130446 ENSG00000172578 KLHL6 - kelch like family member 6 protein-coding chr16-5193 chr16 11516696 11516906 + 7.42 0.000 intron (NM_001370704, intron 4 of 66) AluJo|SINE|Alu 10446 NM_001370704 400499 Hs.459937 NM_001370704 ENSG00000188897 LOC400499 - putative uncharacterized protein LOC400499 protein-coding chr19-3607 chr19 52227464 52227674 + 7.42 0.000 non-coding (NR_033500, exon 14 of 14) non-coding (NR_033500, exon 14 of 14) 5549 NR_106859 102466984 NR_106859 ENSG00000274380 MIR6801 hsa-mir-6801 microRNA 6801 ncRNA chr19-7008 chr19 49501771 49501981 + 7.42 0.000 Intergenic L2a|LINE|L2 -1008 NR_029703 406942 NR_029703 ENSG00000207782 MIR150 MIRN150|miRNA150|mir-150 microRNA 150 ncRNA chr16-4442 chr16 53388892 53389102 + 7.42 0.000 Intergenic Intergenic 15504 NR_119378 102723373 Hs.569678 NR_119378 ENSG00000261804 LOC102723373 - uncharacterized LOC102723373 ncRNA chr10-8059 chr10 65774553 65774763 + 7.42 0.000 Intergenic L1MA9|LINE|L1 203233 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr11-3904 chr11 114469002 114469212 + 7.42 0.000 Intergenic Intergenic 29640 NM_015523 25996 Hs.677190 NM_015523 ENSG00000076043 REXO2 CGI-114|REX2|RFN|SFN RNA exonuclease 2 protein-coding chr6-3996 chr6 115291802 115292012 + 7.42 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 351928 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr4-7498 chr4 73668682 73668892 + 7.42 0.000 Intergenic HERVK13-int|LTR|ERVK -48156 NM_001270392 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr11-10223 chr11 98617942 98618152 + 7.42 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -402902 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr3-10317 chr3 126820094 126820304 + 7.42 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 115959 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr7-8345 chr7 43218627 43218837 + 7.42 0.000 intron (NM_015052, intron 2 of 29) intron (NM_015052, intron 2 of 29) 67837 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr17-7297 chr17 4069671 4069881 + 7.42 0.000 intron (NM_015113, intron 26 of 54) AluSx1|SINE|Alu 73254 NM_015113 23140 Hs.277624 NM_015113 ENSG00000074755 ZZEF1 ZZZ4 zinc finger ZZ-type and EF-hand domain containing 1 protein-coding chr15-2800 chr15 37481838 37482048 + 7.42 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -380632 NM_001220482 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr2-11180 chr2 151648775 151648985 + 7.42 0.000 intron (NM_001271208, intron 54 of 182) Charlie17a|DNA|hAT-Charlie 85596 NM_001271208 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr19-3710 chr19 38160392 38160602 + 7.42 0.000 intron (NM_015073, intron 13 of 21) AluSc|SINE|Alu -2599 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr4-8163 chr4 129453094 129453304 + 7.42 0.000 Intergenic Intergenic 318279 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr17-3257 chr17 31008255 31008465 + 7.42 0.000 promoter-TSS (NM_001350575) promoter-TSS (NM_001350575) 76 NM_001350579 107984974 Hs.558901 NM_001350575 LOC107984974 - uncharacterized LOC107984974 protein-coding chr1-7341 chr1 8967280 8967490 + 7.42 0.000 intron (NM_001270501, intron 4 of 6) MIRb|SINE|MIR 21517 NM_001215 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr6-8301 chr6 143843824 143844034 + 7.42 0.000 intron (NM_001329953, intron 1 of 10) intron (NM_001329953, intron 1 of 10) 591 NM_032860 84946 Hs.185675 NM_032860 ENSG00000135521 LTV1 C6orf93|dJ468K18.4 LTV1 ribosome biogenesis factor protein-coding chr5-8191 chr5 105754083 105754293 + 7.42 0.000 Intergenic Intergenic 654714 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr16-4280 chr16 26030051 26030261 + 7.42 0.000 intron (NM_006040, intron 1 of 1) MIR|SINE|MIR 4919 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr10-7396 chr10 3525984 3526194 + 7.42 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) -23251 NR_155744 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr21-1484 chr21 38352087 38352297 + 7.42 0.000 Intergenic Intergenic -6116 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr14-3778 chr14 56260977 56261187 + 7.42 0.000 intron (NM_021255, intron 2 of 5) intron (NM_021255, intron 2 of 5) 142671 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr1-9064 chr1 15147054 15147264 + 7.42 0.000 intron (NR_027136, intron 1 of 4) MIRb|SINE|MIR 5305 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr16-4470 chr16 56525189 56525399 + 7.42 0.000 Intergenic Intergenic -5270 NM_031885 583 Hs.333738 NM_031885 ENSG00000125124 BBS2 BBS|RP74 Bardet-Biedl syndrome 2 protein-coding chr17-4363 chr17 16963811 16964021 + 7.42 0.000 intron (NM_012452, intron 1 of 4) intron (NM_012452, intron 1 of 4) 8172 NM_012452 23495 Hs.158341 NM_012452 ENSG00000240505 TNFRSF13B CD267|CVID|CVID2|IGAD2|RYZN|TACI|TNFRSF14B TNF receptor superfamily member 13B protein-coding chr3-8952 chr3 14813419 14813629 + 7.42 0.000 Intergenic Intergenic -2110 NR_135245 152274 Hs.434128 NR_135245 ENSG00000260902 LINC02011 - long intergenic non-protein coding RNA 2011 ncRNA chr10-3782 chr10 126090588 126090798 + 7.42 0.000 intron (NM_001288974, intron 11 of 18) intron (NM_001288974, intron 11 of 18) -117420 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr9-3452 chr9 347727 347937 + 7.42 0.000 intron (NM_001193536, intron 13 of 46) intron (NM_001193536, intron 13 of 46) 74784 NM_001193536 81704 Hs.132599 NM_203447 ENSG00000107099 DOCK8 HEL-205|MRD2|ZIR8 dedicator of cytokinesis 8 protein-coding chr11-6860 chr11 100404708 100404918 + 7.42 0.000 Intergenic L2b|LINE|L2 -282475 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr9-7307 chr9 10216251 10216461 + 7.42 0.000 intron (NM_002839, intron 3 of 45) L1ME3D|LINE|L1 396646 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr1-4900 chr1 37556779 37556989 + 7.42 0.000 promoter-TSS (NM_003462) promoter-TSS (NM_003462) -56 NM_003462 7802 Hs.406050 NM_003462 ENSG00000163879 DNALI1 P28|dJ423B22.5|hp28 dynein axonemal light intermediate chain 1 protein-coding chr13-2620 chr13 76925829 76926039 + 7.42 0.000 Intergenic Intergenic -2517 NR_026983 690 Hs.567241 NR_026983 BTF3P11 BTF3L1|HUMBTFB|OCIF|OPG|TNFRSF11B basic transcription factor 3 pseudogene 11 pseudo chr9-7931 chr9 89789926 89790136 + 7.42 0.000 Intergenic Intergenic 150248 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr8-6246 chr8 40370369 40370579 + 7.42 0.000 Intergenic Intergenic -27111 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr3-2680 chr3 48733344 48733554 + 7.42 0.000 Intergenic MER66B|LTR|ERV1 -16171 NM_001190316 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr5-3656 chr5 150661181 150661391 + 7.42 0.000 promoter-TSS (NM_001122853) promoter-TSS (NM_001122853) 35 NM_001122853 91977 Hs.91626 NM_133371 ENSG00000164591 MYOZ3 CS-3|CS3|FATZ-3|FRP3 myozenin 3 protein-coding chr2-5980 chr2 61817137 61817347 + 7.42 0.000 Intergenic Charlie7|DNA|hAT-Charlie 36818 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr12-3985 chr12 19431905 19432115 + 7.42 0.000 Intergenic LTR88b|LTR|Gypsy? -7482 NM_153207 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr3-4452 chr3 37533964 37534174 + 7.42 0.000 intron (NM_002207, intron 14 of 27) intron (NM_002207, intron 14 of 27) 81928 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr17-7713 chr17 32525185 32525395 + 7.42 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 38297 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr16-4219 chr16 13373121 13373331 + 7.42 0.000 Intergenic Intergenic 471628 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr5-6511 chr5 1627031 1627241 + 7.42 0.000 intron (NR_003713, intron 2 of 3) AluJb|SINE|Alu 6869 NR_003713 728613 Hs.720393 NR_003713 LOC728613 - programmed cell death 6 pseudogene pseudo chr2-12547 chr2 68044253 68044463 + 7.42 0.000 intron (NM_173177, intron 4 of 4) intron (NM_173177, intron 4 of 4) 18646 NM_001190263 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding chr13-3016 chr13 19173264 19173474 + 7.42 0.000 TTS (NM_006001) TTS (NM_006001) 8455 NM_006001 7278 Hs.349695 NM_006001 ENSG00000198033 TUBA3C TUBA2|bA408E5.3 tubulin alpha 3c protein-coding chr1-8317 chr1 48224422 48224632 + 7.42 0.000 intron (NM_001135181, intron 1 of 14) intron (NM_001135181, intron 1 of 14) 1811 NM_001135181 200010 Hs.37890 NM_001011547 ENSG00000117834 SLC5A9 SGLT4 solute carrier family 5 member 9 protein-coding chr19-3835 chr19 12983411 12983621 + 7.42 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -11959 NM_001365982 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr20-1571 chr20 1865447 1865657 + 7.42 0.000 Intergenic Intergenic -28615 NM_001330728 140885 Hs.581021 NM_080792 ENSG00000198053 SIRPA BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP signal regulatory protein alpha protein-coding chr16-4239 chr16 19911164 19911374 + 7.42 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -25635 NM_001304771 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chr18-2180 chr18 59659756 59659966 + 7.42 0.000 intron (NM_133459, intron 2 of 10) MIR3|SINE|MIR 37562 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr10-6975 chr10 68841653 68841863 + 7.42 0.000 intron (NM_152709, intron 1 of 3) MER103C|DNA|hAT-Charlie 14221 NM_001130160 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr2-13468 chr2 146602328 146602538 + 7.42 0.000 Intergenic L1MEg|LINE|L1 15376 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-12142 chr2 37772097 37772307 + 7.42 0.000 Intergenic Intergenic 57509 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr3-3502 chr3 13305479 13305689 + 7.42 0.000 Intergenic Intergenic 114738 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chrX-2679 chrX 117714925 117715135 + 7.42 0.000 Intergenic AluSz|SINE|Alu 258708 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr8-3568 chr8 129864362 129864572 + 7.42 0.000 intron (NM_001353307, intron 6 of 13) intron (NM_001353307, intron 6 of 13) 75344 NM_001330612 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr20-3680 chr20 13187210 13187420 + 7.42 0.000 Intergenic L1MCb|LINE|L1 -33959 NM_080826 140862 Hs.559353 NM_080826 ENSG00000101230 ISM1 C20orf82|ISM|Isthmin|bA149I18.1|dJ1077I2.1 isthmin 1 protein-coding chr14-4905 chr14 73014288 73014498 + 7.42 0.000 intron (NM_021260, intron 2 of 11) intron (NM_021260, intron 2 of 11) 12713 NM_001281734 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr20-2399 chr20 19098553 19098763 + 7.42 0.000 Intergenic Intergenic -113984 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr3-6372 chr3 88303425 88303635 + 7.42 0.000 Intergenic SVA_D|Retroposon|SVA -34926 NM_001368165 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr10-5421 chr10 77226875 77227085 + 7.42 0.000 intron (NM_001322838, intron 3 of 29) intron (NM_001322838, intron 3 of 29) 86149 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr8-7246 chr8 128021965 128022175 + 7.42 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) 13172 NR_031611 100302170 NR_031611 ENSG00000283200 MIR1206 MIRN1206|hsa-mir-1206 microRNA 1206 ncRNA chr12-5419 chr12 122055701 122055911 + 7.42 0.000 intron (NM_020993, intron 5 of 5) AluSx1|SINE|Alu -7484 NR_135044 100506691 Hs.536336 NR_135044 ENSG00000256546 LOC100506691 - uncharacterized LOC100506691 ncRNA chr20-2648 chr20 43914437 43914647 + 7.42 0.000 promoter-TSS (NM_001098797) promoter-TSS (NM_001098797) -310 NM_001098797 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr3-8480 chr3 126458086 126458296 + 7.42 0.000 TTS (NM_001040653) TTS (NM_001040653) 17700 NR_104249 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr14-3927 chr14 103198809 103199019 + 7.42 0.000 Intergenic Intergenic -9886 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr1-5784 chr1 164563863 164564073 + 7.42 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 4246 NM_001353130 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr11-3612 chr11 69816066 69816276 + 7.42 0.000 intron (NM_005247, intron 2 of 2) G-rich|Low_complexity|Low_complexity 3245 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr10-4752 chr10 2979284 2979494 + 7.42 0.000 Intergenic Intergenic 87544 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr11-6680 chr11 76795108 76795318 + 7.42 0.000 intron (NM_001318477, intron 1 of 1) intron (NM_001318477, intron 1 of 1) 3461 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr1-13542 chr1 6691679 6691889 + 7.42 0.000 intron (NM_018198, intron 1 of 15) intron (NM_018198, intron 1 of 15) 10032 NM_018198 55735 Hs.462640 NM_018198 ENSG00000007923 DNAJC11 dJ126A5.1 DnaJ heat shock protein family (Hsp40) member C11 protein-coding chr1-16161 chr1 205976126 205976336 + 7.42 0.000 TTS (NM_001304839) TTS (NM_001304839) 18208 NM_177403 338382 Hs.534612 NM_177403 ENSG00000276600 RAB7B RAB7 RAB7B, member RAS oncogene family protein-coding chr15-1670 chr15 40930819 40931029 + 7.42 0.000 intron (NM_019074, intron 3 of 10) CpG-8119 1584 NM_019074 54567 Hs.511076 NM_019074 ENSG00000128917 DLL4 AOS6|delta4|hdelta2 delta like canonical Notch ligand 4 protein-coding chr9-1561 chr9 10612738 10612948 + 7.42 0.000 promoter-TSS (NR_110696) promoter-TSS (NR_110696) 159 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr3-5121 chr3 51895452 51895662 + 7.42 0.000 intron (NM_152397, intron 3 of 3) MIRc|SINE|MIR 7796 NM_152397 132141 Hs.671210 NM_152397 ENSG00000173389 IQCF1 - IQ motif containing F1 protein-coding chr5-7993 chr5 84779324 84779534 + 7.42 0.000 Intergenic Intergenic -394549 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr8-2606 chr8 56410758 56410968 + 7.42 0.000 Intergenic Intergenic -20153 NR_103832 442388 Hs.632065 NM_001145251 ENSG00000253542 SDR16C6P SDR16C6 short chain dehydrogenase/reductase family 16C member 6, pseudogene pseudo chr16-5462 chr16 2896180 2896390 + 7.42 0.000 intron (NM_001142499, intron 2 of 3) intron (NM_001142499, intron 2 of 3) 13070 NM_138439 114984 Hs.534525 NM_138439 ENSG00000162076 FLYWCH2 - FLYWCH family member 2 protein-coding chr11-10041 chr11 83087092 83087302 + 7.42 0.000 Intergenic L2a|LINE|L2 15131 NR_038903 100506233 Hs.503429 NR_038903 ENSG00000246067 RAB30-DT RAB30-AS1 RAB30 divergent transcript ncRNA chr19-4715 chr19 19006713 19006923 + 7.42 0.000 intron (NR_147915, intron 6 of 11) intron (NR_147915, intron 6 of 11) 26699 NR_147913 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr12-7464 chr12 64006219 64006429 + 7.42 0.000 intron (NM_001346201, intron 3 of 21) intron (NM_001346201, intron 3 of 21) 161624 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr3-11237 chr3 196094436 196094646 + 7.42 0.000 Intergenic Intergenic -12451 NM_001313965 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr3-7000 chr3 170301855 170302065 + 7.42 0.000 intron (NM_002740, intron 17 of 17) intron (NM_002740, intron 17 of 17) -55755 NM_001145098 6498 Hs.536655 NM_005414 ENSG00000136603 SKIL SNO|SnoA|SnoI|SnoN SKI like proto-oncogene protein-coding chr11-8289 chr11 72414031 72414241 + 7.42 0.000 intron (NM_001258394, intron 2 of 17) intron (NM_001258394, intron 2 of 17) 20395 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr2-10008 chr2 24168108 24168318 + 7.42 0.000 intron (NM_001145710, intron 10 of 10) L2a|LINE|L2 -6840 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr3-8568 chr3 153316898 153317108 + 7.42 0.000 Intergenic Intergenic 154777 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr5-7277 chr5 13985853 13986063 + 7.42 0.000 Intergenic Intergenic -41478 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr6-6977 chr6 18588291 18588501 + 7.42 0.000 intron (NR_149116, intron 3 of 7) intron (NR_149116, intron 3 of 7) 16612 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr5-7220 chr5 8730317 8730527 + 7.42 0.000 Intergenic Intergenic -109310 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr19-5438 chr19 20410321 20410531 + 7.42 0.000 intron (NR_036455, intron 1 of 2) AluY|SINE|Alu -11072 NR_036053 100302179 NR_036053 ENSG00000238517 MIR1270 MIR1270-1|MIR1270-2|MIRN1270|hsa-mir-1270|hsa-mir-1270-1|mir-1270 microRNA 1270 ncRNA chr2-9643 chr2 20164175 20164385 + 7.42 0.000 Intergenic Intergenic 60850 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr17-6998 chr17 50907868 50908078 + 7.42 0.000 Intergenic Intergenic -39995 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr20-1567 chr20 860212 860422 + 7.42 0.000 Intergenic MamRTE1|LINE|RTE-BovB 15674 NM_031424 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding chr5-5705 chr5 166660517 166660727 + 7.42 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 265748 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr10-7005 chr10 73950659 73950869 + 7.42 0.000 Intergenic Intergenic -27987 NR_160937 414236 Hs.585453 NM_001001791 ENSG00000222047 C10orf55 - chromosome 10 open reading frame 55 ncRNA chr8-3340 chr8 38682343 38682553 + 7.42 0.000 Intergenic Intergenic -45738 NR_148048 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr20-2049 chr20 6169351 6169561 + 7.42 0.000 Intergenic LTR41|LTR|ERVL -45912 NM_017671 55612 Hs.472054 NM_017671 ENSG00000101311 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding chr22-3406 chr22 36619776 36619986 + 7.42 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 82977 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr13-3751 chr13 42534487 42534697 + 7.42 0.000 Intergenic Intergenic -28144 NM_033012 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr1-12484 chr1 19528091 19528301 + 7.42 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -42657 NM_001206540 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr11-5988 chr11 20154401 20154611 + 7.42 0.000 Intergenic Intergenic 5969 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr11-3451 chr11 66577381 66577591 + 7.42 0.000 Intergenic AluSx|SINE|Alu -8880 NM_003793 8722 Hs.11590 NM_003793 ENSG00000174080 CTSF CATSF|CLN13 cathepsin F protein-coding chr5-7258 chr5 11766768 11766978 + 7.42 0.000 intron (NM_001288717, intron 1 of 20) intron (NM_001288717, intron 1 of 20) 137573 NR_109988 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr2-13149 chr2 119015816 119016026 + 7.42 0.000 Intergenic Intergenic 73752 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding chr9-8542 chr9 126657349 126657559 + 7.42 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 43011 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr8-3668 chr8 14497133 14497343 + 7.42 0.000 intron (NM_001322881, intron 2 of 6) MSTB|LTR|ERVL-MaLR 356272 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr7-7250 chr7 28212488 28212698 + 7.42 0.000 intron (NR_034097, intron 2 of 3) AluJr|SINE|Alu -31798 NM_175061 221895 Hs.368944 NM_175061 ENSG00000153814 JAZF1 TIP27|ZNF802 JAZF zinc finger 1 protein-coding chr12-6267 chr12 44762104 44762314 + 7.42 0.000 intron (NM_006159, intron 10 of 20) L2c|LINE|L2 113452 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr15-2401 chr15 63483822 63484032 + 7.42 0.000 Intergenic Intergenic -20584 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr7-7464 chr7 91657333 91657543 + 7.42 0.000 Intergenic Intergenic 223264 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr11-5869 chr11 10562250 10562460 + 7.42 0.000 intron (NM_006691, intron 3 of 5) MIR3|SINE|MIR 6310 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr5-2943 chr5 147782646 147782856 + 7.42 0.000 promoter-TSS (NM_001270941) promoter-TSS (NM_001270941) -23 NM_001270934 9832 Hs.740461 NM_014790 ENSG00000176049 JAKMIP2 JAMIP2|NECC1 janus kinase and microtubule interacting protein 2 protein-coding chrX-3472 chrX 32988453 32988663 + 7.42 0.000 intron (NM_000109, intron 2 of 78) intron (NM_000109, intron 2 of 78) 139869 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr7-8125 chr7 27061473 27061683 + 7.42 0.000 Intergenic AluSz|SINE|Alu 34422 NM_153620 3198 Hs.67397 NM_005522 ENSG00000105991 HOXA1 BSAS|HOX1|HOX1F homeobox A1 protein-coding chr15-2603 chr15 63832985 63833195 + 7.42 0.000 intron (NM_003922, intron 1 of 77) intron (NM_003922, intron 1 of 77) 858 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding chr4-4658 chr4 83250771 83250981 + 7.42 0.000 Intergenic ERVL-E-int|LTR|ERVL 33919 NM_001358921 27235 Hs.144304 NM_015697 ENSG00000173085 COQ2 CL640|COQ10D1|MSA1|PHB:PPT coenzyme Q2, polyprenyltransferase protein-coding chr22-1894 chr22 45173557 45173767 + 7.42 0.000 intron (NM_153645, intron 4 of 8) intron (NM_153645, intron 4 of 8) 8991 NM_153645 10762 Hs.475103 NM_007172 ENSG00000093000 NUP50 NPAP60|NPAP60L nucleoporin 50 protein-coding chr5-9112 chr5 173441985 173442195 + 7.42 0.000 Intergenic Intergenic 94635 NR_107023 102465862 NR_107023 ENSG00000274994 MIR8056 hsa-mir-8056 microRNA 8056 ncRNA chr14-2055 chr14 65486984 65487194 + 7.42 0.000 intron (NM_004480, intron 2 of 9) intron (NM_004480, intron 2 of 9) 15987 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chrX-5097 chrX 127674219 127674429 + 7.42 0.000 Intergenic ERVL-int|LTR|ERVL 378079 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr9-6715 chr9 4621248 4621458 + 7.42 0.000 intron (NM_001353491, intron 10 of 14) Charlie1|DNA|hAT-Charlie 40870 NR_148447 55064 Hs.179615 NM_017985 ENSG00000106686 SPATA6L C9orf68|bA6J24.2 spermatogenesis associated 6 like protein-coding chr5-8247 chr5 111129947 111130157 + 7.42 0.000 3' UTR (NM_139281, exon 23 of 23) 3' UTR (NM_139281, exon 23 of 23) 37880 NM_139281 134430 Hs.533237 NM_139281 ENSG00000134987 WDR36 GLC1G|TA-WDRP|TAWDRP|UTP21 WD repeat domain 36 protein-coding chr1-8017 chr1 225623466 225623676 + 7.42 0.000 intron (NM_001008493, intron 1 of 14) L1PA17|LINE|L1 29552 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr19-3576 chr19 47542518 47542728 + 7.42 0.000 intron (NM_001277075, intron 5 of 16) AluSx|SINE|Alu -27560 NM_003827 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chr2-6138 chr2 227919862 227920072 + 7.42 0.000 intron (NM_178821, intron 11 of 12) intron (NM_178821, intron 11 of 12) 48336 NM_178821 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr11-8830 chr11 12282004 12282214 + 7.42 0.000 Intergenic Intergenic -4791 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr4-3619 chr4 8657557 8657767 + 7.42 0.000 Intergenic Intergenic 64897 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr11-2153 chr11 67196238 67196448 + 7.42 0.000 intron (NR_027473, intron 5 of 20) FLAM_A|SINE|Alu -43671 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr18-3555 chr18 76956319 76956529 + 7.42 0.000 intron (NM_001306089, intron 28 of 30) L1MC3|LINE|L1 60631 NM_001025081 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr17-8436 chr17 76687075 76687285 + 7.42 0.000 intron (NM_198530, intron 2 of 3) intron (NM_198530, intron 2 of 3) 1483 NM_001363769 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr3-5887 chr3 37949466 37949676 + 7.42 0.000 intron (NM_005808, intron 2 of 6) L1ME4a|LINE|L1 -19833 NR_029499 407015 NR_029499 ENSG00000199075 MIR26A1 MIR26A|MIRN26A1|mir-26a-1 microRNA 26a-1 ncRNA chr11-9101 chr11 32271881 32272091 + 7.42 0.000 Intergenic Intergenic -128074 NR_132770 106635521 NR_132770 SNORA88 - small nucleolar RNA, H/ACA box 88 snoRNA chr2-14641 chr2 235290692 235290902 + 7.42 0.000 Intergenic L1MC4a|LINE|L1 -203246 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr5-5916 chr5 54257498 54257708 + 7.42 0.000 intron (NM_019087, intron 1 of 4) intron (NM_019087, intron 1 of 4) 52970 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chrX-3252 chrX 78422866 78423076 + 7.42 0.000 Intergenic AluY|SINE|Alu -95280 NM_001282186 10800 Hs.733809 NM_006639 ENSG00000173198 CYSLTR1 CYSLT1|CYSLT1R|CYSLTR|HMTMF81 cysteinyl leukotriene receptor 1 protein-coding chr19-3325 chr19 5746063 5746273 + 7.42 0.000 intron (NM_152784, intron 9 of 21) intron (NM_152784, intron 9 of 21) 25531 NM_152784 257062 Hs.631842 NM_152784 ENSG00000174898 CATSPERD TMEM146 cation channel sperm associated auxiliary subunit delta protein-coding chr15-3550 chr15 101528212 101528422 + 7.42 0.000 Intergenic Intergenic -38333 NM_138325 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr19-1917 chr19 295079 295289 + 7.42 0.000 Intergenic CpG -3781 NM_177526 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr3-6480 chr3 110237144 110237354 + 7.42 0.000 Intergenic Intergenic 634421 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr17-7614 chr17 27507689 27507899 + 7.42 0.000 intron (NM_014238, intron 2 of 20) AluSp|SINE|Alu 35830 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr1-14253 chr1 36730523 36730733 + 7.42 0.000 Intergenic Intergenic -247314 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr20-1639 chr20 19269952 19270162 + 7.42 0.000 intron (NR_024564, intron 2 of 7) intron (NR_024564, intron 2 of 7) 14539 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr1-9142 chr1 19102485 19102695 + 7.42 0.000 intron (NM_020765, intron 87 of 105) intron (NM_020765, intron 87 of 105) 107676 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr11-6497 chr11 68492707 68492917 + 7.42 0.000 intron (NM_001352362, intron 2 of 24) intron (NM_001352362, intron 2 of 24) 32060 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr3-10517 chr3 137964136 137964346 + 7.42 0.000 Intergenic MER97c|DNA|hAT-Tip100 -34575 NM_001002026 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr8-7405 chr8 139913900 139914110 + 7.42 0.000 intron (NM_001160372, intron 19 of 22) intron (NM_001160372, intron 19 of 22) 186530 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr4-5820 chr4 98588745 98588955 + 7.42 0.000 intron (NM_005723, intron 1 of 7) MIRc|SINE|MIR 69761 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr17-1984 chr17 47323803 47324013 + 7.42 0.000 promoter-TSS (NM_152347) promoter-TSS (NM_152347) -7 NR_110880 102724508 Hs.661005 NR_110880 ENSG00000263293 THCAT158 - thyroid cancer-associated transcript 158 ncRNA chr4-8117 chr4 126521893 126522103 + 7.42 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 1014739 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr11-4746 chr11 87304483 87304693 + 7.42 0.000 intron (NR_033149, intron 7 of 13) intron (NR_033149, intron 7 of 13) 266654 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr4-2229 chr4 146655352 146655562 + 7.42 0.000 Intergenic CpG 16564 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr15-4059 chr15 67741433 67741643 + 7.42 0.000 intron (NM_001206804, intron 17 of 21) intron (NM_001206804, intron 17 of 21) -83971 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr7-7209 chr7 18120700 18120910 + 7.42 0.000 intron (NM_001204144, intron 1 of 12) intron (NM_001204144, intron 1 of 12) 6504 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr17-7480 chr17 15479737 15479947 + 7.42 0.000 intron (NM_001204478, intron 5 of 6) intron (NM_001204478, intron 5 of 6) -9006 NR_146601 94145 Hs.697356 NR_146601 CDRT3 - CMT1A duplicated region transcript 3 ncRNA chr12-6857 chr12 16702758 16702968 + 7.42 0.000 Intergenic MIR|SINE|MIR -94649 NR_045013 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding chr3-7403 chr3 99954022 99954232 + 7.42 0.000 intron (NM_001042459, intron 1 of 4) MIRb|SINE|MIR 10271 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr13-1881 chr13 32018287 32018497 + 7.42 0.000 Intergenic Intergenic 13247 NR_103839 100507099 Hs.536364 NR_103839 FRY-AS1 - FRY antisense RNA 1 ncRNA chr9-8124 chr9 100292623 100292833 + 7.42 0.000 exon (NM_001318381, exon 15 of 18) exon (NM_001318381, exon 15 of 18) 59843 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr2-14351 chr2 218651851 218652061 + 7.42 0.000 TTS (NM_001367342) TTS (NM_001367342) 7667 NM_001105537 7701 Hs.657969 NM_001105537 ENSG00000115568 ZNF142 HA4654|NEDISHM|pHZ-49 zinc finger protein 142 protein-coding chr1-9499 chr1 37322857 37323067 + 7.42 0.000 Intergenic L2c|LINE|L2 151481 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr2-12431 chr2 57566340 57566550 + 7.42 0.000 Intergenic L2b|LINE|L2 -341206 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr17-6215 chr17 8222095 8222305 + 7.42 0.000 intron (NR_026951, intron 2 of 2) intron (NR_026951, intron 2 of 2) 1843 NR_026951 284029 Hs.121692 NM_173621 ENSG00000178977 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA chr7-2569 chr7 112162055 112162265 + 7.42 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 44239 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr2-5003 chr2 218930459 218930669 + 7.42 0.000 promoter-TSS (NR_110238) promoter-TSS (NR_110238) 73 NR_110238 101928537 Hs.611129 NR_110238 ENSG00000228135 LINC01494 - long intergenic non-protein coding RNA 1494 ncRNA chr20-2073 chr20 17255237 17255447 + 7.42 0.000 intron (NM_001201529, intron 1 of 10) L1MB7|LINE|L1 28302 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr2-6363 chr2 104337823 104338033 + 7.42 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 70404 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr16-4903 chr16 89106858 89107068 + 7.42 0.000 intron (NR_104293, intron 4 of 10) intron (NR_104293, intron 4 of 10) 13111 NR_147929 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr14-3805 chr14 67413495 67413705 + 7.42 0.000 Intergenic Intergenic -1435 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chrX-2457 chrX 82130262 82130472 + 7.42 0.000 Intergenic L1MA1|LINE|L1 928265 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr15-4138 chr15 85099995 85100205 + 7.42 0.000 intron (NM_001243137, intron 10 of 21) intron (NM_001243137, intron 10 of 21) 118126 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr10-5563 chr10 88810186 88810396 + 7.42 0.000 intron (NM_001128215, intron 2 of 8) intron (NM_001128215, intron 2 of 8) 7561 NM_001128215 340654 Hs.55118 NM_001128215 ENSG00000173239 LIPM LIPL3|bA304I5.1 lipase family member M protein-coding chr5-6117 chr5 28630701 28630911 + 7.42 0.000 Intergenic (ACAC)n|Simple_repeat|Simple_repeat -296064 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo chr1-16156 chr1 205907289 205907499 + 7.42 0.000 Intergenic MER44B|DNA|TcMar-Tigger 17374 NR_046098 284581 NR_046097 LOC284581 - uncharacterized LOC284581 ncRNA chr10-7254 chr10 125477167 125477377 + 7.42 0.000 Intergenic Intergenic -97099 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr6-6719 chr6 1404021 1404231 + 7.42 0.000 Intergenic Intergenic -13715 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr2-3215 chr2 222305149 222305359 + 7.42 0.000 TTS (NR_161172) TTS (NR_161172) -6256 NM_181457 5077 Hs.42146 NM_000438 ENSG00000135903 PAX3 CDHS|HUP2|WS1|WS3 paired box 3 protein-coding chr3-8507 chr3 131480856 131481066 + 7.42 0.000 intron (NM_007208, intron 6 of 9) MIR3|SINE|MIR -1728 NR_002985 677836 Hs.735762 NR_002985 SNORA58 ACA58|SNORA58B small nucleolar RNA, H/ACA box 58 snoRNA chr1-13216 chr1 211867991 211868201 + 7.42 0.000 Intergenic L1MC1|LINE|L1 37135 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr7-2994 chr7 30708788 30708998 + 7.42 0.000 Intergenic AluJr|SINE|Alu -8790 NM_001202475 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr3-7634 chr3 26658183 26658393 + 7.42 0.000 intron (NM_001317810, intron 2 of 2) AluY|SINE|Alu 33621 NM_001317810 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr2-10379 chr2 174766170 174766380 + 7.42 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR -1803 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr4-4919 chr4 123559920 123560130 + 7.42 0.000 Intergenic Intergenic -89966 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr18-1942 chr18 35568252 35568462 + 7.42 0.000 Intergenic L1MD2|LINE|L1 -23380 NR_039771 100616257 NR_039771 ENSG00000283514 MIR3975 - microRNA 3975 ncRNA chr13-1485 chr13 109046951 109047161 + 7.42 0.000 intron (NM_015011, intron 24 of 34) intron (NM_015011, intron 24 of 34) 120247 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr10-4068 chr10 42996528 42996738 + 7.42 0.000 promoter-TSS (NR_049836) promoter-TSS (NR_049836) -930 NR_049836 100847014 NR_049836 ENSG00000263795 MIR5100 - microRNA 5100 ncRNA chr4-6248 chr4 69017123 69017333 + 7.42 0.000 intron (NM_001075, intron 4 of 7) MIR|SINE|MIR 3168 NM_001290091 7365 Hs.201634 NM_001075 ENSG00000109181 UGT2B10 UDPGT2B10 UDP glucuronosyltransferase family 2 member B10 protein-coding chr1-9846 chr1 63874573 63874783 + 7.42 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 100661 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr12-8080 chr12 117272403 117272613 + 7.42 0.000 exon (NM_001204218, exon 10 of 30) exon (NM_001204218, exon 10 of 30) 32544 NM_001204213 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chrX-5011 chrX 118924416 118924626 + 7.42 0.000 Intergenic L1MD2|LINE|L1 -50093 NR_110311 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr2-9966 chr2 9025075 9025285 + 7.42 0.000 Intergenic L4_C_Mam|LINE|RTE-X -21496 NM_001321267 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr10-8026 chr10 63174321 63174531 + 7.42 0.000 intron (NM_001322258, intron 23 of 24) L1ME1|LINE|L1 41098 NM_030759 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr7-5143 chr7 5569259 5569469 + 7.42 0.000 Intergenic Intergenic -23452 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chrX-2203 chrX 41066762 41066972 + 7.42 0.000 Intergenic Intergenic -18578 NM_001039590 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr17-6710 chr17 79706260 79706470 + 7.42 0.000 promoter-TSS (NR_109783) promoter-TSS (NR_109783) 884 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr8-4302 chr8 97587866 97588076 + 7.42 0.000 Intergenic Intergenic -56213 NM_001363137 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr6-5034 chr6 111556723 111556933 + 7.42 0.000 3' UTR (NM_001164281, exon 9 of 9) 3' UTR (NM_001164281, exon 9 of 9) 10451 NM_001164283 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr7-2907 chr7 131694319 131694529 + 7.42 0.000 Intergenic L2a|LINE|L2 -137796 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr2-7268 chr2 233694157 233694367 + 7.42 0.000 intron (NM_205862, intron 2 of 5) MER58C|DNA|hAT-Charlie 1372 NM_001072 54578 Hs.554822 NM_001072 ENSG00000167165 UGT1A6 GNT1|HLUGP|HLUGP1|UDPGT|UDPGT 1-6|UGT-1A|UGT-1C|UGT-1E|UGT1|UGT1-01|UGT1-03|UGT1-05|UGT1.1|UGT1.3|UGT1.5|UGT1A|UGT1A1|UGT1A3|UGT1A5|UGT1A6S|UGT1C|UGT1E|UGT1F|hUG-BR1 UDP glucuronosyltransferase family 1 member A6 protein-coding chr1-10892 chr1 206780206 206780416 + 7.42 0.000 intron (NM_153758, intron 1 of 6) L2b|LINE|L2 -7817 NM_000572 3586 Hs.193717 NM_000572 ENSG00000136634 IL10 CSIF|GVHDS|IL-10|IL10A|TGIF interleukin 10 protein-coding chr20-2963 chr20 33532464 33532674 + 7.42 0.000 intron (NM_001032999, intron 1 of 10) intron (NM_001032999, intron 1 of 10) -29796 NM_001039709 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr13-1104 chr13 110044550 110044760 + 7.42 0.000 Intergenic Intergenic -8630 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr4-3054 chr4 140691470 140691680 + 7.42 0.000 intron (NM_015130, intron 2 of 20) intron (NM_015130, intron 2 of 20) -48495 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr2-10912 chr2 72141164 72141374 + 7.42 0.000 intron (NM_001277742, intron 1 of 4) intron (NM_001277742, intron 1 of 4) 6593 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr10-5400 chr10 75294288 75294498 + 7.42 0.000 intron (NR_120651, intron 1 of 3) intron (NR_120651, intron 1 of 3) -1990 NR_038226 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA chr17-4861 chr17 64384452 64384662 + 7.42 0.000 intron (NM_000442, intron 2 of 15) MLT1F|LTR|ERVL-MaLR 6303 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr2-4102 chr2 148273068 148273278 + 7.42 0.000 intron (NM_018328, intron 4 of 14) LTR8B|LTR|ERV1 -251569 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr8-4795 chr8 144821148 144821358 + 7.42 0.000 intron (NR_147501, intron 1 of 4) intron (NR_147501, intron 1 of 4) 5787 NR_147501 100130027 Hs.639618 NR_147501 LOC100130027 - uncharacterized LOC100130027 ncRNA chr17-7254 chr17 2435420 2435630 + 7.42 0.000 intron (NM_024086, intron 8 of 9) intron (NM_024086, intron 8 of 9) -20089 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr10-7482 chr10 11000638 11000848 + 7.42 0.000 intron (NM_001326319, intron 4 of 16) intron (NM_001326319, intron 4 of 16) -3905 NM_001326330 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr20-1897 chr20 57294226 57294436 + 7.42 0.000 Intergenic L1ME4b|LINE|L1 27260 NR_036219 100422883 NR_036219 ENSG00000266666 MIR4325 - microRNA 4325 ncRNA chr6-4326 chr6 16623729 16623939 + 7.42 0.000 intron (NM_000332, intron 4 of 8) L1MB7|LINE|L1 136350 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr6-4020 chr6 124286853 124287063 + 7.42 0.000 intron (NM_001040214, intron 2 of 6) AluSq2|SINE|Alu 3953 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr4-4183 chr4 10554726 10554936 + 7.42 0.000 intron (NM_052964, intron 8 of 18) intron (NM_052964, intron 8 of 18) -97405 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr10-5565 chr10 88890689 88890899 + 7.42 0.000 intron (NM_020799, intron 1 of 10) intron (NM_020799, intron 1 of 10) 10549 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr4-4096 chr4 5698003 5698213 + 7.42 0.000 intron (NM_001166136, intron 1 of 21) intron (NM_001166136, intron 1 of 21) 10451 NM_147127 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr3-8900 chr3 12303671 12303881 + 7.42 0.000 intron (NM_001354667, intron 1 of 6) L3|LINE|CR1 -8604 NM_001330615 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr11-10135 chr11 89183445 89183655 + 7.42 0.000 intron (NM_000372, intron 1 of 4) MIRb|SINE|MIR 5675 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr9-3530 chr9 35559953 35560163 + 7.42 0.000 exon (NM_001135999, exon 10 of 12) exon (NM_001135999, exon 10 of 12) 3820 NM_001287239 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr3-5862 chr3 34227660 34227870 + 7.42 0.000 Intergenic Intergenic 429135 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr10-7063 chr10 86657457 86657667 + 7.42 0.000 intron (NM_001030015, intron 3 of 10) intron (NM_001030015, intron 3 of 10) 3005 NM_001030015 94233 Hs.283922 NM_033282 ENSG00000122375 OPN4 MOP opsin 4 protein-coding chr3-10105 chr3 111846093 111846303 + 7.42 0.000 3' UTR (NM_153268, exon 4 of 4) 3' UTR (NM_153268, exon 4 of 4) -12982 NM_145753 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr13-2827 chr13 106211150 106211360 + 7.42 0.000 Intergenic Intergenic -165309 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr12-7591 chr12 77646582 77646792 + 7.42 0.000 Intergenic Intergenic -184207 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr4-5004 chr4 138367515 138367725 + 7.42 0.000 intron (NR_051987, intron 2 of 2) MLT2C1|LTR|ERVL 57909 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr1-12701 chr1 53063311 53063521 + 7.42 0.000 5' UTR (NM_001199080, exon 2 of 13) 5' UTR (NM_001199080, exon 2 of 13) 1203 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chrX-4562 chrX 69965505 69965715 + 7.42 0.000 intron (NM_001005609, intron 2 of 7) L1ME4b|LINE|L1 -57247 NR_037494 100500887 NR_037494 ENSG00000211991 MIR676 hsa-mir-676|mir-676 microRNA 676 ncRNA chr1-10718 chr1 194246800 194247010 + 7.42 0.000 Intergenic MER70A|LTR|ERVL 942160 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr19-5260 chr19 47901447 47901657 + 7.42 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -6126 NR_024216 100169959 Hs.723093 NR_024216 SNAR-A13 - small NF90 (ILF3) associated RNA A13 snRNA chr19-5548 chr19 53963833 53964043 + 7.42 0.000 intron (NM_031895, intron 1 of 3) AluJo|SINE|Alu 1001 NM_031895 59283 Hs.631595 NM_031895 ENSG00000142408 CACNG8 - calcium voltage-gated channel auxiliary subunit gamma 8 protein-coding chr16-3830 chr16 57975938 57976148 + 7.42 0.000 promoter-TSS (NM_199046) promoter-TSS (NM_199046) -392 NM_199456 374739 Hs.132976 NM_199046 ENSG00000159648 TEPP - testis, prostate and placenta expressed protein-coding chr9-8944 chr9 137529416 137529626 + 7.42 0.000 intron (NM_001098537, intron 8 of 34) L1MEf|LINE|L1 20881 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr5-6781 chr5 90000875 90001085 + 7.42 0.000 Intergenic L1PB1|LINE|L1 15740 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr6-7459 chr6 56348159 56348369 + 7.42 0.000 intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) 45864 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chrX-1511 chrX 14149837 14150047 + 7.42 0.000 Intergenic LTR16C|LTR|ERVL -94323 NR_110506 286480 Hs.567831 NR_110506 UBE2E4P UbcM2 ubiquitin conjugating enzyme E2 E4 pseudogene pseudo chr1-11970 chr1 82160028 82160238 + 7.42 0.000 Intergenic Intergenic 357680 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr5-2873 chr5 87421487 87421697 + 7.42 0.000 Intergenic ERVL-B4-int|LTR|ERVL -8559 NM_001363539 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr1-13028 chr1 164346894 164347104 + 7.42 0.000 Intergenic MIR|SINE|MIR -212361 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr3-5760 chr3 22474881 22475091 + 7.42 0.000 Intergenic AluSz|SINE|Alu 517847 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr7-5000 chr7 441194 441404 + 7.42 0.000 Intergenic CpG 61874 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr2-12337 chr2 48433808 48434018 + 7.42 0.000 Intergenic Intergenic -6853 NM_001135629 129285 Hs.654619 NM_152994 ENSG00000162869 PPP1R21 CCDC128|KLRAQ1 protein phosphatase 1 regulatory subunit 21 protein-coding chr5-7008 chr5 154882503 154882713 + 7.42 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 23981 NM_001301073 9337 Hs.26703 NM_004779 ENSG00000155508 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex subunit 8 protein-coding chr8-5025 chr8 17052544 17052754 + 7.42 0.000 intron (NR_146233, intron 1 of 15) intron (NR_146233, intron 1 of 15) 25411 NM_181723 286097 Hs.403594 NM_181723 ENSG00000155970 MICU3 EFHA2 mitochondrial calcium uptake family member 3 protein-coding chr7-8461 chr7 48206907 48207117 + 7.42 0.000 intron (NM_152701, intron 3 of 61) L1MA4|LINE|L1 35554 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr10-7431 chr10 6022906 6023116 + 7.42 0.000 intron (NM_000417, intron 3 of 7) intron (NM_000417, intron 3 of 7) 39356 NM_001308243 3559 Hs.231367 NM_000417 ENSG00000134460 IL2RA CD25|IDDM10|IL2R|IMD41|TCGFR|p55 interleukin 2 receptor subunit alpha protein-coding chr17-8515 chr17 79150825 79151035 + 7.42 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 75993 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr5-7197 chr5 6775355 6775565 + 7.42 0.000 Intergenic Intergenic -20420 NR_146281 109729133 Hs.582455 NR_146281 ENSG00000251365 LINC02236 - long intergenic non-protein coding RNA 2236 ncRNA chr9-5649 chr9 121692078 121692288 + 7.42 0.000 intron (NM_032552, intron 2 of 16) intron (NM_032552, intron 2 of 16) -50602 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr2-7145 chr2 196341067 196341277 + 7.42 0.000 intron (NM_020760, intron 3 of 28) intron (NM_020760, intron 3 of 28) 21005 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr15-1038 chr15 99105544 99105754 + 7.42 0.000 exon (NM_015286, exon 1 of 5) exon (NM_015286, exon 1 of 5) 569 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr1-13759 chr1 16465082 16465292 + 7.42 0.000 intron (NR_147210, intron 1 of 1) MLT1F2|LTR|ERVL-MaLR 3380 NR_147211 107984921 Hs.528312 NR_147210 ENSG00000226029 LINC01772 - long intergenic non-protein coding RNA 1772 ncRNA chr14-5019 chr14 78223537 78223747 + 7.42 0.000 intron (NR_073547, intron 1 of 20) intron (NR_073547, intron 1 of 20) 53269 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr3-3747 chr3 1563993 1564203 + 7.42 0.000 Intergenic Intergenic 471074 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr3-9891 chr3 82811587 82811797 + 7.42 0.000 Intergenic L1M4c|LINE|L1 825550 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr19-4218 chr19 47403635 47403845 + 7.42 0.000 intron (NM_001346148, intron 12 of 12) intron (NM_001346148, intron 12 of 12) 15787 NM_001009813 56917 Hs.380923 NM_020160 ENSG00000105419 MEIS3 MRG2 Meis homeobox 3 protein-coding chr15-4155 chr15 89708782 89708992 + 7.42 0.000 intron (NM_001284395, intron 4 of 16) intron (NM_001284395, intron 4 of 16) 18076 NM_001284396 56964 Hs.177557 NM_020212 ENSG00000140527 WDR93 - WD repeat domain 93 protein-coding chr2-6511 chr2 193070889 193071099 + 7.42 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 321149 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr10-7327 chr10 384730 384940 + 7.42 0.000 intron (NM_014974, intron 14 of 36) intron (NM_014974, intron 14 of 36) 204841 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr5-3282 chr5 115056091 115056301 + 7.42 0.000 Intergenic Intergenic 113712 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr20-3569 chr20 3439530 3439740 + 7.42 0.000 Intergenic L1MC3|LINE|L1 -31383 NM_001207047 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr2-11643 chr2 6204894 6205104 + 7.42 0.000 Intergenic AluSx1|SINE|Alu 170423 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr8-3700 chr8 18707607 18707817 + 7.42 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 101155 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr17-3649 chr17 6257556 6257766 + 7.42 0.000 Intergenic Intergenic 177460 NM_001285399 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr3-5782 chr3 25045429 25045639 + 7.42 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 216211 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr11-4960 chr11 67967335 67967545 + 7.42 0.000 Intergenic Intergenic 36657 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chrX-4936 chrX 110933552 110933762 + 7.42 0.000 Intergenic Intergenic -10584 NM_001128167 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr3-10792 chr3 159595000 159595210 + 7.42 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 173507 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr3-10528 chr3 138619299 138619509 + 7.42 0.000 intron (NM_001033030, intron 2 of 5) MIR3|SINE|MIR 10355 NM_018147 55179 Hs.173438 NM_018147 ENSG00000158234 FAIM FAIM1 Fas apoptotic inhibitory molecule protein-coding chr3-7835 chr3 108159903 108160113 + 7.42 0.000 TTS (NM_018010) TTS (NM_018010) 34187 NR_110028 101929623 Hs.570653 NR_110028 ENSG00000271856 LINC01215 - long intergenic non-protein coding RNA 1215 ncRNA chr19-3696 chr19 19532171 19532381 + 7.42 0.000 intron (NM_198537, intron 2 of 6) intron (NM_198537, intron 2 of 6) 3365 NM_001190328 374887 Hs.729508 NM_198537 ENSG00000250067 YJEFN3 - YjeF N-terminal domain containing 3 protein-coding chr1-16310 chr1 216290599 216290809 + 7.42 0.000 intron (NM_206933, intron 10 of 71) L2c|LINE|L2 132692 NM_007123 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chrX-1202 chrX 71151964 71152174 + 7.42 0.000 intron (NM_181303, intron 3 of 7) intron (NM_181303, intron 3 of 7) 7228 NM_001321276 54413 Hs.438877 NM_018977 ENSG00000196338 NLGN3 HNL3 neuroligin 3 protein-coding chr2-8342 chr2 108953305 108953515 + 7.42 0.000 intron (NM_022336, intron 1 of 11) L1M4a1|LINE|L1 35810 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr5-2755 chr5 143435085 143435295 + 7.42 0.000 promoter-TSS (NM_001364183) promoter-TSS (NM_001364183) 322 NM_001018075 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr10-6677 chr10 109747488 109747698 + 7.42 0.000 Intergenic Intergenic 175653 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr16-6030 chr16 9657578 9657788 + 7.42 0.000 Intergenic Intergenic -202178 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr7-3788 chr7 87233179 87233389 + 7.42 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -12697 NR_138030 79161 Hs.619593 NM_024315 ENSG00000135185 TMEM243 C7orf23|MM-TRAG|MMTRAG transmembrane protein 243 protein-coding chr1-10510 chr1 167012378 167012588 + 7.42 0.000 intron (NM_032858, intron 8 of 11) L2a|LINE|L2 23203 NM_032858 84944 Hs.651245 NM_032858 ENSG00000143194 MAEL CT128|SPATA35 maelstrom spermatogenic transposon silencer protein-coding chrX-2984 chrX 36973793 36974003 + 7.42 0.000 Intergenic Intergenic -34461 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr9-7490 chr9 29740886 29741096 + 7.42 0.000 Intergenic Intergenic -527390 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr2-9537 chr2 239193186 239193396 + 7.42 0.000 TTS (NR_026664) TTS (NR_026664) 2166 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr19-5229 chr19 38587064 38587274 + 7.42 0.000 TTS (NM_001042600) TTS (NM_001042600) -9178 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr11-2732 chr11 14369395 14369605 + 7.42 0.000 Intergenic Intergenic -4994 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr1-11044 chr1 223635008 223635218 + 7.42 0.000 intron (NM_001143962, intron 2 of 20) intron (NM_001143962, intron 2 of 20) 30588 NM_001143962 388743 Hs.291487 NM_001143962 ENSG00000203697 CAPN8 nCL-2 calpain 8 protein-coding chr10-2709 chr10 103849764 103849974 + 7.42 0.000 intron (NM_014631, intron 1 of 13) intron (NM_014631, intron 1 of 13) 5537 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-6853 chr2 72936985 72937195 + 7.42 0.000 Intergenic Intergenic 19571 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr7-2544 chr7 77625192 77625402 + 7.42 0.000 intron (NM_001131009, intron 11 of 16) AluJb|SINE|Alu 70968 NR_134251 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr11-6878 chr11 102485164 102485374 + 7.42 0.000 intron (NR_135076, intron 1 of 2) AluJo|SINE|Alu 18014 NR_135076 102723838 Hs.738066 NR_135076 ENSG00000255482 LOC102723838 - uncharacterized LOC102723838 ncRNA chr8-6498 chr8 64726515 64726725 + 7.42 0.000 intron (NM_004820, intron 1 of 5) MIRc|SINE|MIR 72117 NM_001324112 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr11-10279 chr11 104033186 104033396 + 7.42 0.000 intron (NM_025208, intron 1 of 6) intron (NM_025208, intron 1 of 6) -3349 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr5-7037 chr5 167391941 167392151 + 7.42 0.000 intron (NM_001122679, intron 3 of 29) intron (NM_001122679, intron 3 of 29) -181613 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr18-2598 chr18 21852909 21853119 + 7.42 0.000 intron (NM_020774, intron 17 of 20) intron (NM_020774, intron 17 of 20) -21608 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA chr12-4434 chr12 9951216 9951426 + 7.42 0.000 promoter-TSS (NM_001207010) promoter-TSS (NM_001207010) 53 NM_001207010 160364 Hs.190519 NM_138337 ENSG00000172322 CLEC12A CD371|CLL-1|CLL1|DCAL-2|MICL C-type lectin domain family 12 member A protein-coding chr3-10063 chr3 107284849 107285059 + 7.42 0.000 intron (NR_028302, intron 1 of 3) intron (NR_028302, intron 1 of 3) 44262 NR_028302 344595 Hs.543039 NR_028301 ENSG00000243701 DUBR DUM|LINC00883|LINC0883 DPPA2 upstream binding RNA ncRNA chr12-5460 chr12 124150413 124150623 + 7.42 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -138646 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr4-6999 chr4 23458417 23458627 + 7.42 0.000 Intergenic Intergenic 422770 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr11-8950 chr11 19192198 19192408 + 7.42 0.000 intron (NM_003476, intron 2 of 5) intron (NM_003476, intron 2 of 5) 9680 NM_001369404 8048 Hs.83577 NM_003476 ENSG00000129170 CSRP3 CLP|CMD1M|CMH12|CRP3|LMO4|MLP cysteine and glycine rich protein 3 protein-coding chr5-6244 chr5 91098500 91098710 + 7.42 0.000 intron (NR_003149, intron 86 of 89) intron (NR_003149, intron 86 of 89) 215797 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr16-2623 chr16 3141593 3141803 + 7.42 0.000 non-coding (NR_104432, exon 6 of 6) non-coding (NR_104432, exon 6 of 6) -2593 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chrX-2060 chrX 19227655 19227865 + 7.42 0.000 Intergenic MIRb|SINE|MIR -105123 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr16-3639 chr16 85921149 85921359 + 7.42 0.000 exon (NM_001363908, exon 7 of 7) exon (NM_001363908, exon 7 of 7) 2907 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr9-6323 chr9 73702 73912 + 7.42 0.000 intron (NR_121190, intron 1 of 2).2 CpG 1117 NR_121189 101929127 Hs.552787 NR_121188 ENSG00000277631 PGM5P3-AS1 FAM233B PGM5P3 antisense RNA 1 ncRNA chr2-12145 chr2 38003948 38004158 + 7.42 0.000 intron (NM_001170793, intron 8 of 9) intron (NM_001170793, intron 8 of 9) 32288 NR_102712 101410544 Hs.591566 NR_102712 RMDN2-AS1 - RMDN2 antisense RNA 1 ncRNA chr2-12540 chr2 66854333 66854543 + 7.42 0.000 Intergenic Intergenic -49998 NR_110169 101060019 Hs.116425 NR_110169 ENSG00000230525 LINC01799 - long intergenic non-protein coding RNA 1799 ncRNA chr2-9371 chr2 229403442 229403652 + 7.42 0.000 intron (NM_139072, intron 10 of 12) intron (NM_139072, intron 10 of 12) -132260 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr5-4655 chr5 36203817 36204027 + 7.42 0.000 intron (NM_001085411, intron 8 of 11) intron (NM_001085411, intron 8 of 11) 37469 NM_001287340 133686 Hs.81907 NM_153013 ENSG00000152620 NADK2 C5orf33|DECRD|MNADK|NADKD1 NAD kinase 2, mitochondrial protein-coding chr14-1798 chr14 23057469 23057679 + 7.42 0.000 promoter-TSS (NM_022478) promoter-TSS (NM_022478) -36 NM_144985 64403 Hs.155912 NM_022478 ENSG00000139880 CDH24 CDH11L cadherin 24 protein-coding chr11-9960 chr11 76894882 76895092 + 7.42 0.000 intron (NM_001300953, intron 1 of 9) LTR108a_Mam|LTR|ERVL 34069 NM_001300954 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr1-7961 chr1 187326174 187326384 + 7.42 0.000 intron (NR_126347, intron 2 of 3) intron (NR_126347, intron 2 of 3) -117349 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr9-1160 chr9 31049816 31050026 + 7.42 0.000 Intergenic AluSc|SINE|Alu 331569 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr4-5185 chr4 158604249 158604459 + 7.42 0.000 intron (NR_045581, intron 4 of 17) MIR3|SINE|MIR 67533 NM_001008393 201725 Hs.380920 NM_001008393 ENSG00000205208 C4orf46 RCDG1 chromosome 4 open reading frame 46 protein-coding chr19-2950 chr19 7113994 7114204 + 7.42 0.000 3' UTR (NM_000208, exon 22 of 22) 3' UTR (NM_000208, exon 22 of 22) 44396 NM_001044387 79230 Hs.591380 NM_024341 ENSG00000130544 ZNF557 - zinc finger protein 557 protein-coding chr15-2396 chr15 61806779 61806989 + 7.42 0.000 Intergenic Intergenic 76966 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr9-6873 chr9 84669275 84669485 + 7.42 0.000 promoter-TSS (NM_001369538) promoter-TSS (NM_001369538) 74 NM_001369547 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr2-11025 chr2 108151760 108151970 + 7.42 0.000 Intergenic AluSx1|SINE|Alu 65976 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA chr17-4391 chr17 29082030 29082240 + 7.42 0.000 intron (NM_001346767, intron 39 of 39) intron (NM_001346767, intron 39 of 39) -6526 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr1-16536 chr1 232335964 232336174 + 7.42 0.000 Intergenic Intergenic 179539 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr14-4900 chr14 72616829 72617039 + 7.42 0.000 Intergenic MIR1_Amn|SINE|MIR 100114 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr2-6932 chr2 111020675 111020885 + 7.42 0.000 intron (NM_001371254, intron 15 of 18) intron (NM_001371254, intron 15 of 18) 94808 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr21-759 chr21 43205450 43205660 + 7.42 0.000 Intergenic Intergenic 35319 NM_001320719 102724652 Hs.184085 NM_001314050 ENSG00000276076 CRYAA2 CRYAA crystallin alpha A2 protein-coding chr11-7311 chr11 58710861 58711071 + 7.42 0.000 intron (NM_201648, intron 4 of 5) LTR10C|LTR|ERV1 20977 NM_201648 10249 Hs.145384 NM_005838 ENSG00000149124 GLYAT ACGNAT|CAT|GAT glycine-N-acyltransferase protein-coding chr8-2366 chr8 32548872 32549082 + 7.42 0.000 intron (NM_013960, intron 1 of 12) CpG 666 NM_004495 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr14-2712 chr14 90437547 90437757 + 7.42 0.000 Intergenic Intergenic 17465 NR_146493 101930294 NR_146492 ENSG00000258678 LINC02317 - long intergenic non-protein coding RNA 2317 ncRNA chrX-3440 chrX 21413008 21413218 + 7.42 0.000 intron (NM_001168648, intron 1 of 20) L1MB3|LINE|L1 38695 NM_001330771 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr7-7825 chr7 3480180 3480390 + 7.42 0.000 intron (NM_152744, intron 1 of 44) MER65D|LTR|ERV1 179033 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr5-4304 chr5 151124000 151124210 + 7.42 0.000 intron (NM_001193544, intron 14 of 24) intron (NM_001193544, intron 14 of 24) 17579 NM_001193544 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr11-4470 chr11 105609142 105609352 + 7.42 0.000 promoter-TSS (NM_000829) promoter-TSS (NM_000829) -826 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr6-2436 chr6 162154091 162154301 + 7.42 0.000 intron (NM_004562, intron 4 of 11) intron (NM_004562, intron 4 of 11) -572936 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr3-10736 chr3 155495483 155495693 + 7.42 0.000 intron (NM_001349252, intron 15 of 24) intron (NM_001349252, intron 15 of 24) 9785 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr15-5270 chr15 99156381 99156591 + 7.42 0.000 intron (NR_109947, intron 10 of 12) THE1C|LTR|ERVL-MaLR 51406 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr2-3842 chr2 30679401 30679611 + 7.42 0.000 Intergenic Intergenic 127940 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr4-6169 chr4 40524678 40524888 + 7.42 0.000 intron (NM_001098634, intron 2 of 6) AluJb|SINE|Alu -8798 NM_019027 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr10-3820 chr10 132982071 132982281 + 7.42 0.000 Intergenic Intergenic 16642 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA chr5-5774 chr5 173824075 173824285 + 7.42 0.000 Intergenic Intergenic -33238 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr7-7040 chr7 135684954 135685164 + 7.42 0.000 intron (NM_001318192, intron 14 of 15) intron (NM_001318192, intron 14 of 15) 22545 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr18-2032 chr18 45738715 45738925 + 7.42 0.000 intron (NM_001308278, intron 5 of 8) intron (NM_001308278, intron 5 of 8) 11867 NM_001146037 6563 Hs.101307 NM_015865 ENSG00000141469 SLC14A1 HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE solute carrier family 14 member 1 (Kidd blood group) protein-coding chr10-5112 chr10 49208578 49208788 + 7.42 0.000 Intergenic MIR|SINE|MIR -20292 NM_001288741 170371 Hs.385493 NM_001010863 ENSG00000204161 TMEM273 C10orf128 transmembrane protein 273 protein-coding chr9-6877 chr9 85209896 85210106 + 7.42 0.000 Intergenic L1ME4a|LINE|L1 504100 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr5-3072 chr5 35117842 35118052 + 7.42 0.000 intron (NR_037910, intron 1 of 7) intron (NR_037910, intron 1 of 7) 175 NR_037910 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr18-3315 chr18 55510040 55510250 + 7.42 0.000 intron (NM_001348217, intron 2 of 18) intron (NM_001348217, intron 2 of 18) 627 NM_001243231 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr10-6242 chr10 69209094 69209304 + 7.42 0.000 TTS (NM_001301683) TTS (NM_001301683) -11133 NM_025130 80201 Hs.522988 NM_025130 ENSG00000156510 HKDC1 - hexokinase domain containing 1 protein-coding chr16-3353 chr16 30513196 30513406 + 7.42 0.000 intron (NM_002209, intron 24 of 30) intron (NM_002209, intron 24 of 30) 9382 NR_039743 100616405 NR_039743 ENSG00000266305 MIR4518 mir-4518 microRNA 4518 ncRNA chr16-4224 chr16 14151617 14151827 + 7.42 0.000 3' UTR (NM_001365421, exon 6 of 6) 3' UTR (NM_001365421, exon 6 of 6) -34964 NM_001365415 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr6-5387 chr6 152399587 152399797 + 7.42 0.000 exon (NM_033071, exon 48 of 146) exon (NM_033071, exon 48 of 146) 19162 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr12-4196 chr12 96702125 96702335 + 7.42 0.000 intron (NM_001306084, intron 46 of 67) L2a|LINE|L2 -205027 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr7-4787 chr7 80767784 80767994 + 7.42 0.000 intron (NM_006379, intron 12 of 17) intron (NM_006379, intron 12 of 17) 121236 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr7-5511 chr7 44172357 44172567 + 7.42 0.000 intron (NM_001354800, intron 1 of 10) intron (NM_001354800, intron 1 of 10) -13180 NM_033508 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr7-6929 chr7 81904099 81904309 + 7.42 0.000 Intergenic L1PB2|LINE|L1 -104973 NR_110077 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr3-10438 chr3 132255194 132255404 + 7.42 0.000 Intergenic Intergenic -62108 NM_001099 55 Hs.433060 NM_001099 ENSG00000014257 ACPP 5'-NT|ACP-3|ACP3 acid phosphatase, prostate protein-coding chr6-4226 chr6 5057219 5057429 + 7.42 0.000 intron (NR_126015, intron 2 of 3) intron (NR_126015, intron 2 of 3) 27352 NR_126018 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr17-2567 chr17 62488664 62488874 + 7.42 0.000 intron (NM_001284363, intron 1 of 19) L1MEg|LINE|L1 7656 NM_001284363 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr4-3218 chr4 40159136 40159346 + 7.42 0.000 TTS (NM_018177) TTS (NM_018177) -31839 NM_001278368 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chr16-5986 chr16 5330997 5331207 + 7.42 0.000 Intergenic Intergenic -233282 NM_001289029 196483 Hs.406461 NM_201400 ENSG00000118894 EEF2KMT EFM3|FAM86A|SB153|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding chr8-4148 chr8 76100427 76100637 + 7.42 0.000 Intergenic Intergenic -306122 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr20-1402 chr20 20779248 20779458 + 7.42 0.000 Intergenic AluSz6|SINE|Alu -66709 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr2-5227 chr2 46381529 46381739 + 7.42 0.000 exon (NM_001430, exon 13 of 16) exon (NM_001430, exon 13 of 16) 12533 NR_146999 105374582 Hs.570163 NR_146999 ENSG00000228100 LINC01820 - long intergenic non-protein coding RNA 1820 ncRNA chr2-5098 chr2 14778155 14778365 + 7.42 0.000 Intergenic Intergenic 145543 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr22-1354 chr22 27478658 27478868 + 7.42 0.000 Intergenic Intergenic 168112 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr18-1813 chr18 13559389 13559599 + 7.42 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -51620 NR_039752 100616130 NR_039752 ENSG00000263527 MIR4526 mir-4526 microRNA 4526 ncRNA chr16-5414 chr16 89729601 89729811 + 7.42 0.000 intron (NR_110129, intron 6 of 10) intron (NR_110129, intron 6 of 10) 8169 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr13-4273 chr13 97892733 97892943 + 7.42 0.000 Intergenic MIR|SINE|MIR -60837 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr2-11670 chr2 7331903 7332113 + 7.42 0.000 Intergenic THE1C|LTR|ERVL-MaLR -89253 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr10-5701 chr10 100567669 100567879 + 7.42 0.000 Intergenic Intergenic 31831 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr9-7920 chr9 89456284 89456494 + 7.42 0.000 intron (NM_001371194, intron 1 of 15) intron (NM_001371194, intron 1 of 15) 23501 NR_163888 chr3-5194 chr3 71509072 71509282 + 7.42 0.000 intron (NR_146142, intron 2 of 19) intron (NR_146142, intron 2 of 19) 32912 NR_031697 100302112 NR_031697 ENSG00000221264 MIR1284 MIRN1284|hsa-mir-1284|mir-1284 microRNA 1284 ncRNA chr19-4105 chr19 16725712 16725922 + 7.42 0.000 intron (NM_001007525, intron 2 of 18) AluSz|SINE|Alu -5375 NM_001347994 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr5-7224 chr5 9250300 9250510 + 7.42 0.000 intron (NM_003966, intron 5 of 22) intron (NM_003966, intron 5 of 22) -196510 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr22-3104 chr22 50340832 50341042 + 7.42 0.000 Intergenic L2|LINE|L2 -2390 NM_001351648 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr20-1063 chr20 20356321 20356531 + 7.42 0.000 intron (NM_015585, intron 26 of 26) intron (NM_015585, intron 26 of 26) -11678 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr17-4618 chr17 6999414 6999624 + 7.42 0.000 intron (NM_000697, intron 6 of 13) intron (NM_000697, intron 6 of 13) 3470 NM_000697 239 Hs.654431 NM_000697 ENSG00000108839 ALOX12 12-LOX|12S-LOX|LOG12 arachidonate 12-lipoxygenase, 12S type protein-coding chr9-8622 chr9 128903635 128903845 + 7.42 0.000 intron (NM_001127244, intron 2 of 3) intron (NM_001127244, intron 2 of 3) -17242 NM_001100876 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr16-3584 chr16 70330988 70331198 + 7.42 0.000 intron (NM_007242, intron 9 of 11) AluJr|SINE|Alu 15654 NR_039997 100506083 Hs.635008 NR_039997 ENSG00000261777 LOC100506083 - uncharacterized LOC100506083 ncRNA chr17-2191 chr17 74768011 74768221 + 7.42 0.000 intron (NM_004252, intron 4 of 5) intron (NM_004252, intron 4 of 5) 8229 NM_001305087 26151 Hs.144058 NM_015654 ENSG00000109065 NAT9 EBSP, hNATL N-acetyltransferase 9 (putative) protein-coding chr4-7574 chr4 79155427 79155637 + 7.42 0.000 intron (NR_038342, intron 3 of 5) Tigger19b|DNA|TcMar-Tigger 170529 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr8-5100 chr8 56560442 56560652 + 7.42 0.000 promoter-TSS (NR_038236) promoter-TSS (NR_038236) -724 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chrX-4200 chrX 35789869 35790079 + 7.42 0.000 Intergenic Intergenic -8368 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr3-5319 chr3 127789037 127789247 + 7.42 0.000 intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 33740 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr1-8458 chr1 110584167 110584377 + 7.42 0.000 Intergenic Intergenic 22086 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr2-6035 chr2 110211523 110211733 + 7.42 0.000 TTS (NM_001355251) TTS (NM_001355251) -6615 NM_001128178 4867 Hs.280388 NM_000272 ENSG00000144061 NPHP1 JBTS4|NPH1|SLSN1 nephrocystin 1 protein-coding chr12-4694 chr12 48941498 48941708 + 7.42 0.000 intron (NM_001659, intron 1 of 4) intron (NM_001659, intron 1 of 4) 15884 NM_001659 377 Hs.119177 NM_001659 ENSG00000134287 ARF3 - ADP ribosylation factor 3 protein-coding chr10-7072 chr10 88327097 88327307 + 7.42 0.000 intron (NM_018363, intron 5 of 6) THE1D-int|LTR|ERVL-MaLR 256116 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr4-3898 chr4 146108323 146108533 + 7.42 0.000 Intergenic Intergenic 13485 NR_038331 100505545 Hs.122199 NR_038331 ENSG00000248809 LINC01095 - long intergenic non-protein coding RNA 1095 ncRNA chr1-11096 chr1 229318116 229318326 + 7.42 0.000 Intergenic L1MEf|LINE|L1 13839 NM_006542 10638 Hs.296169 NM_006542 ENSG00000213029 SPHAR - S-phase response (cyclin related) protein-coding chr9-3015 chr9 122178891 122179101 + 7.42 0.000 intron (NM_001286828, intron 3 of 3) L2b|LINE|L2 19088 NM_001286828 254956 Hs.71428 NM_198469 ENSG00000185681 MORN5 C9orf113|C9orf18 MORN repeat containing 5 protein-coding chr3-6140 chr3 56441076 56441286 + 7.42 0.000 intron (NR_132749, intron 1 of 17) MLT1H|LTR|ERVL-MaLR 27286 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr12-6817 chr12 12883415 12883625 + 7.42 0.000 Intergenic Intergenic -7502 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr12-2063 chr12 113077970 113078180 + 7.42 0.000 exon (NM_004416, exon 2 of 9) exon (NM_004416, exon 2 of 9) 20218 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 RNF140|hDx-1 deltex E3 ubiquitin ligase 1 protein-coding chr8-4282 chr8 95648412 95648622 + 7.42 0.000 intron (NR_038205, intron 2 of 2) intron (NR_038205, intron 2 of 2) 299831 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr7-4948 chr7 139478849 139479059 + 7.42 0.000 intron (NM_198508, intron 3 of 4) AluJr|SINE|Alu 4719 NM_198508 346689 Hs.17572 NM_198508 ENSG00000188883 KLRG2 CLEC15B killer cell lectin like receptor G2 protein-coding chr6-6351 chr6 57135954 57136164 + 7.42 0.000 intron (NM_015555, intron 7 of 13) intron (NM_015555, intron 7 of 13) 36154 NR_110742 101927211 Hs.705718 NR_110742 ZNF451-AS1 - ZNF451 regulatory antisense RNA 1 ncRNA chr19-5934 chr19 51060008 51060218 + 7.42 0.000 intron (NR_145463, intron 2 of 4) intron (NR_145463, intron 2 of 4) 4806 NR_145466 26085 Hs.165296 NM_015596 ENSG00000167759 KLK13 KLK-L4|KLKL4 kallikrein related peptidase 13 protein-coding chrX-4565 chrX 70033221 70033431 + 7.42 0.000 intron (NM_001005612, intron 6 of 7) intron (NM_001005612, intron 6 of 7) 10469 NR_037494 100500887 NR_037494 ENSG00000211991 MIR676 hsa-mir-676|mir-676 microRNA 676 ncRNA chr19-3064 chr19 3270637 3270847 + 7.42 0.000 intron (NR_033342, intron 2 of 12) intron (NR_033342, intron 2 of 12) 45464 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr11-7550 chr11 17498755 17498965 + 7.42 0.000 intron (NR_123738, intron 17 of 19) L2a|LINE|L2 -22015 NM_001351296 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr15-5280 chr15 100516034 100516244 + 7.42 0.000 intron (NM_001290341, intron 3 of 13) intron (NM_001290341, intron 3 of 13) 28147 NM_001290342 204219 Hs.662371 NM_178842 ENSG00000154227 CERS3 ARCI9|LASS3 ceramide synthase 3 protein-coding chr1-10255 chr1 118849854 118850064 + 7.42 0.000 Intergenic Intergenic 138384 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr3-5642 chr3 11185736 11185946 + 7.42 0.000 intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) 31348 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr7-7559 chr7 117949008 117949218 + 7.42 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -75672 NM_001363351 83992 Hs.592285 NM_033427 ENSG00000077063 CTTNBP2 C7orf8|CORTBP2|Orf4 cortactin binding protein 2 protein-coding chr21-1724 chr21 32989877 32990087 + 7.42 0.000 Intergenic Intergenic 31094 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA chr2-7287 chr2 236200443 236200653 + 7.42 0.000 intron (NM_212556, intron 4 of 5) LTR33|LTR|ERVL -32162 NM_001485 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr10-6627 chr10 97889784 97889994 + 7.42 0.000 intron (NM_001206528, intron 11 of 14) intron (NM_001206528, intron 11 of 14) -13992 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chrX-4826 chrX 102144982 102145192 + 7.42 0.000 Intergenic L1M4|LINE|L1 -2606 NM_001367790 158931 Hs.447815 NM_001006938 ENSG00000204071 TCEAL6 Tceal3|WEX2 transcription elongation factor A like 6 protein-coding chr3-6178 chr3 59844651 59844861 + 7.42 0.000 intron (NM_001354590, intron 7 of 8) L1MB3|LINE|L1 -186259 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr10-6256 chr10 74194813 74195023 + 7.42 0.000 intron (NM_001369124, intron 1 of 9) intron (NM_001369124, intron 1 of 9) 18155 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr10-4548 chr10 100129610 100129820 + 7.42 0.000 Intergenic L1MCb|LINE|L1 -47846 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chr14-3398 chr14 95527534 95527744 + 7.42 0.000 Intergenic Intergenic 5990 NR_003002 677768 Hs.448753 NR_003002 ENSG00000252481 SCARNA13 U93 small Cajal body-specific RNA 13 ncRNA chr8-2433 chr8 101259036 101259246 + 7.42 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -53077 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr8-4479 chr8 117858345 117858555 + 7.42 0.000 intron (NM_000127, intron 1 of 10) AluSz|SINE|Alu 62463 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr10-3981 chr10 123666369 123666579 + 7.42 0.000 exon (NM_153442, exon 1 of 3) exon (NM_153442, exon 1 of 3) 119 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr13-3839 chr13 48783003 48783213 + 7.42 0.000 Intergenic L1PBb|LINE|L1 129179 NM_001308471 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr10-8099 chr10 68889061 68889271 + 7.42 0.000 intron (NM_152709, intron 3 of 3) AluJb|SINE|Alu -12149 NM_024045 79009 Hs.522984 NM_024045 ENSG00000107625 DDX50 GU2|GUB|RH-II/GuB|mcdrh DExD-box helicase 50 protein-coding chr14-3513 chr14 103298503 103298713 + 7.42 0.000 Intergenic Intergenic -18676 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr17-6223 chr17 15896843 15897053 + 7.42 0.000 Intergenic Intergenic -47969 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr10-2906 chr10 124851713 124851923 + 7.42 0.000 Intergenic AluJr|SINE|Alu 49999 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr1-5961 chr1 30111641 30111851 + 7.42 0.000 Intergenic Intergenic -74134 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr2-5751 chr2 219405002 219405212 + 7.42 0.000 Intergenic Intergenic -5100 NM_001319117 23549 Hs.258551 NM_012100 ENSG00000123992 DNPEP ASPEP|DAP aspartyl aminopeptidase protein-coding chr15-4494 chr15 51158224 51158434 + 7.42 0.000 intron (NR_146310, intron 1 of 2) intron (NR_146310, intron 1 of 2) -53053 NM_207381 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr2-9190 chr2 216277142 216277352 + 7.42 0.000 intron (NM_020814, intron 3 of 3) intron (NM_020814, intron 3 of 3) 60358 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA chr4-6535 chr4 172573655 172573865 + 7.42 0.000 intron (NM_001034845, intron 5 of 12) intron (NM_001034845, intron 5 of 12) 115157 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr14-3766 chr14 52079742 52079952 + 7.42 0.000 Intergenic Intergenic -10788 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr4-4763 chr4 98905810 98906020 + 7.42 0.000 intron (NM_001968, intron 1 of 6) intron (NM_001968, intron 1 of 6) 23218 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chrX-4137 chrX 27950235 27950445 + 7.42 0.000 Intergenic Intergenic 31109 NM_001017930 139425 Hs.447365 NM_001017930 ENSG00000226372 DCAF8L1 WDR42B DDB1 and CUL4 associated factor 8 like 1 protein-coding chr2-3803 chr2 20595991 20596201 + 7.42 0.000 Intergenic Intergenic -3548 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr7-5244 chr7 17333257 17333467 + 7.42 0.000 intron (NM_001621, intron 6 of 10) intron (NM_001621, intron 6 of 10) 34710 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr7-5822 chr7 83718253 83718463 + 7.42 0.000 Intergenic Intergenic -69219 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr22-1661 chr22 40786212 40786422 + 7.42 0.000 intron (NR_104235, intron 5 of 10) AluSz|SINE|Alu 27641 NR_039923 100616283 NR_039923 ENSG00000266594 MIR4766 mir-4766 microRNA 4766 ncRNA chr15-1990 chr15 42133876 42134086 + 7.42 0.000 Intergenic Intergenic 22655 NR_033151 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr11-6842 chr11 96332389 96332599 + 7.42 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -8944 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr13-3783 chr13 44903690 44903900 + 7.42 0.000 Intergenic Intergenic 85676 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 nuclear FMR1 interacting protein 1 protein-coding chrX-4689 chrX 85491775 85491985 + 7.42 0.000 Intergenic Intergenic -112215 NM_001307940 79983 Hs.267038 NM_024921 ENSG00000124429 POF1B POF|POF2B POF1B actin binding protein protein-coding chr15-5303 chr15 101538117 101538327 + 7.42 0.000 Intergenic Intergenic -48238 NM_138325 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr4-6259 chr4 74550039 74550249 + 7.42 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 105008 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr17-4613 chr17 5665589 5665799 + 7.42 0.000 Intergenic Intergenic -81185 NM_033004 22861 Hs.652273 NM_014922 ENSG00000091592 NLRP1 AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family pyrin domain containing 1 protein-coding chr3-4413 chr3 5119385 5119595 + 7.42 0.000 Intergenic AluSc|SINE|Alu -2802 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr14-4215 chr14 96136332 96136542 + 7.42 0.000 Intergenic Intergenic -68361 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr4-8322 chr4 145308949 145309159 + 7.42 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 31365 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr8-6233 chr8 38626984 38627194 + 7.42 0.000 Intergenic L2c|LINE|L2 -25832 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr2-6091 chr2 189056827 189057037 + 7.42 0.000 intron (NM_000393, intron 35 of 53) intron (NM_000393, intron 35 of 53) 61302 NR_037401 100500837 NR_037401 ENSG00000284180 MIR3606 mir-3606 microRNA 3606 ncRNA chr5-5623 chr5 154220764 154220974 + 7.42 0.000 intron (NM_198321, intron 1 of 11) MER102c|DNA|hAT-Charlie 30136 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr16-2532 chr16 4273313 4273523 + 7.42 0.000 promoter-TSS (NM_003223) promoter-TSS (NM_003223) -395 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chrX-3880 chrX 5474043 5474253 + 7.42 0.000 Intergenic Intergenic -752210 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr5-2916 chr5 133370170 133370380 + 7.42 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 57431 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr9-8719 chr9 131771498 131771708 + 7.42 0.000 Intergenic Intergenic -31659 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr1-4723 chr1 2125108 2125318 + 7.42 0.000 intron (NM_001033582, intron 1 of 14) intron (NM_001033582, intron 1 of 14) 20497 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr2-7011 chr2 147089344 147089554 + 7.42 0.000 Intergenic MLT2B3|LTR|ERVL 502392 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr7-5837 chr7 87036899 87037109 + 7.42 0.000 intron (NM_001142749, intron 1 of 21) intron (NM_001142749, intron 1 of 21) 3230 NM_001291991 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr6-5574 chr6 18004655 18004865 + 7.42 0.000 Intergenic Intergenic -17125 NM_001105567 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr1-7230 chr1 224340904 224341114 + 7.42 0.000 Intergenic MER52D|LTR|ERV1 -10820 NM_001243146 4931 Hs.497867 NM_002533 ENSG00000143748 NVL NVL2 nuclear VCP like protein-coding chr2-7606 chr2 26292796 26293006 + 7.42 0.000 Intergenic L1MD3|LINE|L1 26148 NM_001145168 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr16-6714 chr16 72077806 72078016 + 7.42 0.000 TTS (NM_020995) TTS (NM_020995) 14685 NM_020995 3250 Hs.655361 NM_020995 ENSG00000261701 HPR A-259H10.2|HP haptoglobin-related protein protein-coding chr15-4467 chr15 48669888 48670098 + 7.42 0.000 Intergenic Intergenic -24205 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr21-1856 chr21 42020411 42020621 + 7.42 0.000 intron (NR_119384, intron 1 of 1) intron (NR_119384, intron 1 of 1) -1488 NR_119385 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA chr2-7773 chr2 40634338 40634548 + 7.42 0.000 Intergenic Intergenic -122008 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chrX-4676 chrX 83478100 83478310 + 7.42 0.000 Intergenic L1PA15|LINE|L1 -30085 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr8-7211 chr8 126500061 126500271 + 7.42 0.000 Intergenic LTR33B|LTR|ERVL 58312 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr22-2330 chr22 40261421 40261631 + 7.42 0.000 intron (NM_015088, intron 3 of 20) AluSx3|SINE|Alu 83601 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr4-3186 chr4 7611415 7611625 + 7.42 0.000 intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) -142570 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr20-4213 chr20 47325259 47325469 + 7.42 0.000 intron (NM_001281774, intron 3 of 23) intron (NM_001281774, intron 3 of 23) 6862 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr18-1001 chr18 35826917 35827127 + 7.42 0.000 Intergenic Intergenic 77904 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr22-3467 chr22 43237999 43238209 + 7.42 0.000 intron (NM_173050, intron 7 of 21) intron (NM_173050, intron 7 of 21) 25430 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr12-3171 chr12 50506020 50506230 + 7.42 0.000 intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 1140 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr3-4674 chr3 45043680 45043890 + 7.42 0.000 Intergenic Intergenic 13642 NM_001308394 7123 Hs.476092 NM_003278 ENSG00000163815 CLEC3B TN|TNA C-type lectin domain family 3 member B protein-coding chr3-6391 chr3 96906889 96907099 + 7.42 0.000 intron (NM_001080448, intron 2 of 17) intron (NM_001080448, intron 2 of 17) 92400 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr10-7684 chr10 29038977 29039187 + 7.42 0.000 Intergenic Intergenic 192674 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr11-9397 chr11 57240867 57241077 + 7.42 0.000 Intergenic Intergenic -3519 NM_005161 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr15-4774 chr15 70486603 70486813 + 7.42 0.000 Intergenic Intergenic 19220 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr9-7689 chr9 71573323 71573533 + 7.42 0.000 Intergenic AluJr|SINE|Alu -126457 NM_001366144 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr15-1848 chr15 51266624 51266834 + 7.42 0.000 intron (NM_000103, intron 1 of 9) intron (NM_000103, intron 1 of 9) -10940 NM_001347253 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr11-4163 chr11 48272384 48272594 + 7.42 0.000 Intergenic MIRb|SINE|MIR 8628 NM_001004726 390113 Hs.553742 NM_001004726 ENSG00000176567 OR4X1 OR11-104 olfactory receptor family 4 subfamily X member 1 (gene/pseudogene) protein-coding chr16-5620 chr16 59115290 59115500 + 7.42 0.000 Intergenic Intergenic -381079 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr10-4941 chr10 26093255 26093465 + 7.42 0.000 intron (NM_017433, intron 15 of 34) intron (NM_017433, intron 15 of 34) -122947 NM_000818 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr2-6540 chr2 210651305 210651515 + 7.42 0.000 intron (NR_163592, intron 18 of 27) intron (NR_163592, intron 18 of 27) 33839 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr15-4548 chr15 56817426 56817636 + 7.42 0.000 Intergenic Intergenic -83445 NM_001288589 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding chr14-4216 chr14 96178068 96178278 + 7.42 0.000 Intergenic Intergenic -26625 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr18-1812 chr18 13530978 13531188 + 7.42 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) 71136 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr9-4601 chr9 100379821 100380031 + 7.42 0.000 Intergenic L1MC5|LINE|L1 -26984 NM_017746 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr5-5089 chr5 97090341 97090551 + 7.42 0.000 Intergenic Intergenic 52165 NM_153234 167410 Hs.656702 NM_153234 ENSG00000145721 LIX1 C5orf11|Lft limb and CNS expressed 1 protein-coding chr3-3254 chr3 50380343 50380553 + 7.42 0.000 intron (NM_001291101, intron 8 of 37) intron (NM_001291101, intron 8 of 37) 15085 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr16-2036 chr16 31087637 31087847 + 7.42 0.000 intron (NM_001039503, intron 2 of 10) intron (NM_001039503, intron 2 of 10) 1067 NM_001039503 339105 Hs.569575 NM_001039503 ENSG00000151006 PRSS53 POL3S|UNQ308 serine protease 53 protein-coding chr8-2374 chr8 38847882 38848092 + 7.42 0.000 exon (NM_001352793, exon 12 of 12) exon (NM_001352793, exon 12 of 12) 42537 NM_001352791 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr1-12322 chr1 248703712 248703922 + 7.42 0.000 Intergenic Intergenic 6755 NR_125950 101928226 NR_125950 LYPD9P - LY6/PLAUR domain containing 9, pseudogene pseudo chr20-3468 chr20 56091878 56092088 + 7.42 0.000 Intergenic Intergenic -86464 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr7-7953 chr7 11364063 11364273 + 7.42 0.000 Intergenic Intergenic 390296 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr12-7145 chr12 47996071 47996281 + 7.42 0.000 intron (NM_033150, intron 7 of 52) intron (NM_033150, intron 7 of 52) 8300 NM_001844 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr22-1373 chr22 31970101 31970311 + 7.42 0.000 promoter-TSS (NR_149128) promoter-TSS (NR_149128) -617 NR_149128 105372999 Hs.512525 NR_149128 LINC02558 - long intergenic non-protein coding RNA 2558 ncRNA chr20-3684 chr20 13821942 13822152 + 7.42 0.000 TTS (NM_001352403) TTS (NM_001352403) 37019 NM_024120 79133 Hs.472165 NM_024120 ENSG00000101247 NDUFAF5 C20orf7|MC1DN16|bA526K24.2|dJ842G6.1 NADH:ubiquinone oxidoreductase complex assembly factor 5 protein-coding chr6-5250 chr6 136785478 136785688 + 7.42 0.000 non-coding (NR_134635, exon 2 of 2) non-coding (NR_134635, exon 2 of 2) 1536 NR_134635 101928429 Hs.672896 NR_134635 LOC101928429 - uncharacterized LOC101928429 ncRNA chr14-5260 chr14 99777618 99777828 + 7.42 0.000 Intergenic HAL1|LINE|L1 -15690 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr10-5668 chr10 98275076 98275286 + 7.42 0.000 Intergenic MER5A|DNA|hAT-Charlie -6987 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr2-10424 chr2 198595029 198595239 + 7.42 0.000 Intergenic Intergenic -220037 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr11-10751 chr11 133648368 133648578 + 7.42 0.000 Intergenic Intergenic -115972 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr3-10750 chr3 156190026 156190236 + 7.42 0.000 intron (NM_003471, intron 1 of 13) intron (NM_003471, intron 1 of 13) 37752 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr2-13953 chr2 186423582 186423792 + 7.42 0.000 Intergenic LTR16C|LTR|ERVL -62573 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding chr11-3000 chr11 119507752 119507962 + 7.42 0.000 Intergenic SVA_F|Retroposon|SVA -82872 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr3-7415 chr3 107861659 107861869 + 7.42 0.000 intron (NR_024276, intron 3 of 7) (TCCC)n|Simple_repeat|Simple_repeat 16304 NR_024276 151658 Hs.159043 NR_015414 ENSG00000241469 LINC00635 - long intergenic non-protein coding RNA 635 ncRNA chr5-2982 chr5 95810 96020 + 7.42 0.000 intron (NM_052909, intron 1 of 19) intron (NM_052909, intron 1 of 19) 3747 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr7-9666 chr7 151943205 151943415 + 7.42 0.000 Intergenic Intergenic -13136 NR_033169 168391 Hs.647077 NM_145292 ENSG00000106648 GALNTL5 GALNACT19|GALNT15|GalNAc-T5L polypeptide N-acetylgalactosaminyltransferase like 5 protein-coding chr1-12169 chr1 184224583 184224793 + 7.42 0.000 Intergenic L2b|LINE|L2 -162341 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr4-8188 chr4 132789265 132789475 + 7.42 0.000 Intergenic L1MB4|LINE|L1 198281 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr11-10589 chr11 123381608 123381818 + 7.42 0.000 promoter-TSS (NR_039714) promoter-TSS (NR_039714) -201 NR_039714 100616319 NR_039714 ENSG00000265357 MIR4493 - microRNA 4493 ncRNA chr4-7741 chr4 92769667 92769877 + 7.42 0.000 intron (NM_001286838, intron 2 of 14) THE1B-int|LTR|ERVL-MaLR 465373 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr20-1887 chr20 49984070 49984280 + 7.42 0.000 exon (NM_005985, exon 2 of 3) exon (NM_005985, exon 2 of 3) 1195 NM_005985 6615 Hs.48029 NM_005985 ENSG00000124216 SNAI1 SLUGH2|SNA|SNAH|SNAIL|SNAIL1|dJ710H13.1 snail family transcriptional repressor 1 protein-coding chr14-2352 chr14 22767121 22767331 + 7.42 0.000 intron (NM_005015, intron 1 of 9) CpG 538 NM_005015 5018 Hs.151134 NM_005015 ENSG00000155463 OXA1L OXA1 OXA1L mitochondrial inner membrane protein protein-coding chr21-952 chr21 43347909 43348119 + 7.42 0.000 Intergenic MER58B|DNA|hAT-Charlie 14335 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr2-11802 chr2 16745400 16745610 + 7.42 0.000 Intergenic Intergenic -79671 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr12-3066 chr12 7033235 7033445 + 7.42 0.000 Intergenic Intergenic -14864 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr21-1374 chr21 41514034 41514244 + 7.42 0.000 Intergenic ERVL-B4-int|LTR|ERVL -5981 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr8-1917 chr8 38386144 38386354 + 7.42 0.000 promoter-TSS (NM_001286819) promoter-TSS (NM_001286819) -192 NM_001286821 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 SLC55A2 leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr6-7329 chr6 45854423 45854633 + 7.42 0.000 Intergenic Intergenic 83069 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr1-15388 chr1 151043196 151043406 + 7.42 0.000 intron (NM_138278, intron 5 of 9) intron (NM_138278, intron 5 of 9) -4450 NM_017860 54964 Hs.549171 NM_017860 ENSG00000143443 C1orf56 MENT chromosome 1 open reading frame 56 protein-coding chr11-5575 chr11 106154374 106154584 + 7.42 0.000 Intergenic Intergenic -22363 NR_135099 105369473 Hs.524010 NR_135099 ENSG00000254580 LINC02719 - long intergenic non-protein coding RNA 2719 ncRNA chr1-7889 chr1 119847075 119847285 + 7.42 0.000 Intergenic Intergenic -2300 NM_001047980 343505 NM_001047980 NBPF7 - NBPF member 7 protein-coding chr22-4194 chr22 45944088 45944298 + 7.42 0.000 intron (NM_058238, intron 2 of 3) intron (NM_058238, intron 2 of 3) 32969 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr9-8853 chr9 135738314 135738524 + 7.42 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 36234 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr2-4785 chr2 36951810 36952020 + 7.42 0.000 intron (NM_003162, intron 1 of 17) MER1B|DNA|hAT-Charlie 14621 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr20-2677 chr20 45598669 45598879 + 7.42 0.000 Intergenic Intergenic -19490 NM_181510 90199 Hs.116128 NM_130896 ENSG00000158901 WFDC8 C20orf170|HEL-S-292|WAP8|dJ461P17.1 WAP four-disulfide core domain 8 protein-coding chr14-2277 chr14 36942861 36943071 + 7.42 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) 9425 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr7-6142 chr7 124417795 124418005 + 7.42 0.000 Intergenic Intergenic -65804 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr21-1633 chr21 21975931 21976141 + 7.42 0.000 Intergenic THE1A|LTR|ERVL-MaLR 122423 NR_109959 101927843 Hs.652879 NR_109959 ENSG00000233215 LINC01687 - long intergenic non-protein coding RNA 1687 ncRNA chr21-778 chr21 44947587 44947797 + 7.42 0.000 intron (NM_001316986, intron 2 of 4) intron (NM_001316986, intron 2 of 4) 7663 NM_058190 85395 Hs.410830 NM_058190 ENSG00000160256 FAM207A C21orf70|PRED56 family with sequence similarity 207 member A protein-coding chr10-5567 chr10 89151837 89152047 + 7.42 0.000 Intergenic Intergenic 55375 NM_003956 9023 Hs.47357 NM_003956 ENSG00000138135 CH25H C25H cholesterol 25-hydroxylase protein-coding chr7-8294 chr7 39530996 39531206 + 7.42 0.000 Intergenic Intergenic -35303 NM_001282446 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr6-5778 chr6 837945 838155 + 7.42 0.000 Intergenic Intergenic -30448 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr18-668 chr18 52342130 52342340 + 7.42 0.000 intron (NM_005215, intron 1 of 28) CpG 2038 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr17-7132 chr17 76572287 76572497 + 7.42 0.000 intron (NM_006456, intron 5 of 8) MIR|SINE|MIR 10759 NR_004395 677848 NR_004395 ENSG00000278261 SNORD1A R38A|snR38A small nucleolar RNA, C/D box 1A snoRNA chr7-8437 chr7 47369233 47369443 + 7.42 0.000 exon (NM_022748, exon 17 of 31) exon (NM_022748, exon 17 of 31) 95465 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr19-7085 chr19 55863178 55863388 + 7.42 0.000 intron (NM_134444, intron 5 of 9) MSTA|LTR|ERVL-MaLR -26521 NM_145007 204801 Hs.375039 NM_145007 ENSG00000179873 NLRP11 CLR19.6|NALP11|NOD17|PAN10|PYPAF6|PYPAF7 NLR family pyrin domain containing 11 protein-coding chr12-5795 chr12 15584542 15584752 + 7.42 0.000 intron (NM_030671, intron 11 of 13) intron (NM_030671, intron 11 of 13) 38036 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr2-9963 chr2 7466052 7466262 + 7.42 0.000 Intergenic Intergenic 44896 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr10-6496 chr10 51820611 51820821 + 7.42 0.000 intron (NM_001098512, intron 4 of 17) intron (NM_001098512, intron 4 of 17) -121121 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr12-6333 chr12 55414492 55414702 + 7.42 0.000 Intergenic Intergenic -11657 NM_001005183 390326 Hs.553764 NM_001005183 ENSG00000185821 OR6C76 - olfactory receptor family 6 subfamily C member 76 protein-coding chr16-4246 chr16 20995903 20996113 + 7.42 0.000 intron (NM_001347886, intron 44 of 61) HAL1M8|LINE|L1 94746 NM_001369645 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr14-3403 chr14 95629070 95629280 + 7.42 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -22922 NR_152604 27004 Hs.510368 NM_012468 TCL6 TNG1|TNG2 T cell leukemia/lymphoma 6 ncRNA chr17-4901 chr17 73268148 73268358 + 7.42 0.000 Intergenic MIRb|SINE|MIR -6373 NM_001129885 642843 Hs.534707 NM_001129885 ENSG00000187959 CPSF4L - cleavage and polyadenylation specific factor 4 like protein-coding chr6-5598 chr6 37711846 37712056 + 7.42 0.000 Intergenic Intergenic -14068 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr8-3872 chr8 37835263 37835473 + 7.42 0.000 exon (NM_032777, exon 12 of 19) exon (NM_032777, exon 12 of 19) 14493 NM_018310 55290 Hs.709301 NM_018310 ENSG00000104221 BRF2 BRFU|TFIIIB50 BRF2 RNA polymerase III transcription initiation factor subunit protein-coding chr5-3097 chr5 42656681 42656891 + 7.42 0.000 intron (NM_001242403, intron 3 of 9) intron (NM_001242403, intron 3 of 9) 90922 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr10-2824 chr10 21565844 21566054 + 7.42 0.000 intron (NM_001324297, intron 4 of 24) AluSx1|SINE|Alu 31777 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr1-9756 chr1 54694868 54695078 + 7.42 0.000 intron (NM_001039464, intron 16 of 23) MIRb|SINE|MIR -20849 NM_001291333 7268 Hs.412482 NM_004623 ENSG00000243725 TTC4 CNS1 tetratricopeptide repeat domain 4 protein-coding chr4-7371 chr4 60344290 60344500 + 7.42 0.000 Intergenic AluJb|SINE|Alu -578224 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr2-10590 chr2 241645779 241645989 + 7.42 0.000 intron (NM_013325, intron 1 of 12) intron (NM_013325, intron 1 of 12) 8191 NM_013325 23192 Hs.283610 NM_013325 ENSG00000168397 ATG4B APG4B|AUTL1 autophagy related 4B cysteine peptidase protein-coding chr1-10720 chr1 194616011 194616221 + 7.42 0.000 Intergenic Intergenic 1311371 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr16-4615 chr16 70081452 70081662 + 7.42 0.000 Intergenic Intergenic -15609 NR_003610 283970 Hs.513695 NM_199134 ENSG00000196696 PDXDC2P-NPIPB14P - nuclear pore complex-interacting protein pseudo chr11-2530 chr11 75706396 75706606 + 7.42 0.000 Intergenic (CCT)n|Simple_repeat|Simple_repeat -11337 NM_025098 80168 Hs.288568 NM_025098 ENSG00000166391 MOGAT2 DGAT2L5|DGAT2L5.|MGAT2|hDC5 monoacylglycerol O-acyltransferase 2 protein-coding chr7-7179 chr7 7260749 7260959 + 7.42 0.000 intron (NR_108073, intron 2 of 3) intron (NR_108073, intron 2 of 3) 5700 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr6-8193 chr6 133837931 133838141 + 7.42 0.000 intron (NR_027030, intron 2 of 2) CpG 16889 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr9-4007 chr9 34706941 34707151 + 7.42 0.000 Intergenic MamGypLTR1a|LTR|Gypsy 3090 NM_002989 6366 Hs.57907 NM_002989 ENSG00000137077 CCL21 6Ckine|CKb9|ECL|SCYA21|SLC|TCA4 C-C motif chemokine ligand 21 protein-coding chr5-3709 chr5 14178690 14178900 + 7.42 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 35453 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr17-7965 chr17 48011552 48011762 + 7.42 0.000 Intergenic Intergenic -21225 NR_162100 113218499 NR_162100 MIR10226 - microRNA 10226 ncRNA chr6-6895 chr6 12684788 12684998 + 7.42 0.000 Intergenic HAL1M8|LINE|L1 -31874 NM_001322308 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr1-15080 chr1 97247277 97247487 + 7.42 0.000 intron (NM_000110, intron 18 of 22) intron (NM_000110, intron 18 of 22) 151459 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr15-4000 chr15 55799127 55799337 + 7.42 0.000 Intergenic (CTCC)n|Simple_repeat|Simple_repeat -56080 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chrX-1231 chrX 85963814 85964024 + 7.42 0.000 exon (NM_000390, exon 5 of 15) exon (NM_000390, exon 5 of 15) -60212 NR_029848 494323 NR_029848 ENSG00000199051 MIR361 MIRN361|hsa-mir-361|mir-361 microRNA 361 ncRNA chr20-3129 chr20 34685804 34686014 + 7.42 0.000 Intergenic L2a|LINE|L2 -8624 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr5-8982 chr5 163162520 163162730 + 7.42 0.000 Intergenic Intergenic -274946 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr2-10163 chr2 84368774 84368984 + 7.42 0.000 Intergenic HAL1|LINE|L1 78197 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr4-6594 chr4 813631 813841 + 7.42 0.000 intron (NM_006651, intron 2 of 3) intron (NM_006651, intron 2 of 3) 12393 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr4-8555 chr4 165755079 165755289 + 7.42 0.000 intron (NR_121676, intron 5 of 5) L2a|LINE|L2 -12113 NR_121677 101928131 Hs.406479 NR_121677 LOC101928131 - uncharacterized LOC101928131 ncRNA chr6-5894 chr6 43650376 43650586 + 7.42 0.000 exon (NM_152732, exon 2 of 5) exon (NM_152732, exon 2 of 5) 5445 NM_152732 221421 Hs.534585 NM_152732 ENSG00000172426 RSPH9 C6orf206|CILD12|MRPS18AL1 radial spoke head 9 homolog protein-coding chr1-12797 chr1 82817226 82817436 + 7.42 0.000 Intergenic L1MC4|LINE|L1 -85852 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr8-3852 chr8 32182356 32182566 + 7.42 0.000 intron (NM_013962, intron 1 of 4) AluSx|SINE|Alu 156243 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr5-5584 chr5 150071564 150071774 + 7.42 0.000 intron (NM_001288705, intron 6 of 20) Tigger15a|DNA|TcMar-Tigger 14971 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr12-5761 chr12 660081 660291 + 7.42 0.000 intron (NM_016533, intron 1 of 3) AluJb|SINE|Alu 3259 NM_016533 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chr6-5596 chr6 37101077 37101287 + 7.42 0.000 Intergenic Intergenic -68970 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr6-4019 chr6 124113598 124113808 + 7.42 0.000 intron (NM_001040214, intron 1 of 6) L1MB1|LINE|L1 -169302 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr11-10147 chr11 91417194 91417404 + 7.42 0.000 Intergenic L1PB1|LINE|L1 -548097 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr3-6537 chr3 118730867 118731077 + 7.42 0.000 intron (NR_135547, intron 1 of 3) intron (NR_135547, intron 1 of 3) 79861 NR_135547 105374060 Hs.99062 NR_135547 LOC105374060 - uncharacterized LOC105374060 ncRNA chr22-3168 chr22 29433976 29434186 + 7.42 0.000 Intergenic FLAM_C|SINE|Alu -4502 NM_021026 5988 Hs.648249 NM_021026 ENSG00000128250 RFPL1 RNF78 ret finger protein like 1 protein-coding chr2-10073 chr2 43579229 43579439 + 7.42 0.000 intron (NM_001083953, intron 8 of 37) intron (NM_001083953, intron 8 of 37) 16640 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding chr12-2725 chr12 2984657 2984867 + 7.42 0.000 intron (NM_201443, intron 1 of 10) Tigger3b|DNA|TcMar-Tigger 24827 NM_201443 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr12-5233 chr12 108432896 108433106 + 7.42 0.000 Intergenic Intergenic 40688 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr2-8617 chr2 143203135 143203345 + 7.42 0.000 intron (NM_018460, intron 3 of 13) L2a|LINE|L2 73821 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr11-5783 chr11 5192401 5192611 + 7.42 0.000 Intergenic L1MC2|LINE|L1 8194 NM_001004760 283111 Hs.553670 NM_001004760 ENSG00000176742 OR51V1 OR11-36|OR51A12 olfactory receptor family 51 subfamily V member 1 protein-coding chr12-4182 chr12 92987305 92987515 + 7.42 0.000 Intergenic MamRep137|DNA|TcMar-Tigger -58115 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr4-8377 chr4 149228496 149228706 + 7.42 0.000 intron (NR_125887, intron 9 of 12) MER49|LTR|ERV1 74306 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr5-7029 chr5 159987118 159987328 + 7.42 0.000 Intergenic CpG -21877 NM_001282500 7265 Hs.519718 NM_003314 ENSG00000113312 TTC1 TPR1 tetratricopeptide repeat domain 1 protein-coding chr20-2276 chr20 3761067 3761277 + 7.42 0.000 intron (NR_047675, intron 1 of 5) L1MC5a|LINE|L1 6581 NM_001258429 54976 Hs.274422 NM_017874 ENSG00000101220 C20orf27 - chromosome 20 open reading frame 27 protein-coding chr13-3002 chr13 109307241 109307451 + 7.42 0.000 Intergenic Intergenic -93350 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr1-13043 chr1 169640643 169640853 + 7.42 0.000 Intergenic Intergenic -10624 NM_003005 6403 Hs.73800 NM_003005 ENSG00000174175 SELP CD62|CD62P|GMP140|GRMP|LECAM3|PADGEM|PSEL selectin P protein-coding chr15-4597 chr15 60223317 60223527 + 7.42 0.000 Intergenic Intergenic 174564 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr18-3511 chr18 74520592 74520802 + 7.42 0.000 3' UTR (NM_001168499, exon 9 of 9) 3' UTR (NM_001168499, exon 9 of 9) -13803 NM_032649 84735 Hs.400613 NM_032649 ENSG00000150656 CNDP1 CN1|CPGL2|HsT2308 carnosine dipeptidase 1 protein-coding chr2-10844 chr2 58533388 58533598 + 7.42 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 12740 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr10-5366 chr10 73234325 73234535 + 7.42 0.000 intron (NM_173348, intron 10 of 13) intron (NM_173348, intron 10 of 13) 12825 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding chr14-1999 chr14 53273800 53274010 + 7.42 0.000 Intergenic LTR18B|LTR|ERVL 120551 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr2-7735 chr2 36994047 36994257 + 7.42 0.000 intron (NM_019024, intron 33 of 35) L1MC4|LINE|L1 -27616 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr14-4201 chr14 91353805 91354015 + 7.42 0.000 intron (NM_001080414, intron 4 of 29) intron (NM_001080414, intron 4 of 29) 63910 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr9-5898 chr9 132426792 132427002 + 7.42 0.000 intron (NM_001282957, intron 1 of 5) intron (NM_001282957, intron 1 of 5) 16686 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr9-4308 chr9 122819848 122820058 + 7.42 0.000 3' UTR (NM_005388, exon 4 of 4) 3' UTR (NM_005388, exon 4 of 4) 8635 NM_005388 5082 Hs.271749 NM_005388 ENSG00000136940 PDCL PhLP phosducin like protein-coding chr2-14155 chr2 203905688 203905898 + 7.42 0.000 Intergenic L1MC1|LINE|L1 -30955 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr14-2264 chr14 21304596 21304806 + 7.42 0.000 intron (NM_020366, intron 5 of 23) L1MC1|LINE|L1 16724 NM_020366 57096 Hs.126035 NM_020366 ENSG00000092200 RPGRIP1 CORD13|LCA6|RGI1|RGRIP|RPGRIP|RPGRIP1d RPGR interacting protein 1 protein-coding chr3-7112 chr3 183120383 183120593 + 7.42 0.000 Intergenic Intergenic -20901 NR_120639 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding chrX-3660 chrX 101347289 101347499 + 7.42 0.000 3' UTR (NM_001145951, exon 2 of 2) 3' UTR (NM_001145951, exon 2 of 2) 1348 NM_001145951 1678 Hs.447877 NM_004085 ENSG00000126953 TIMM8A DDP|DDP1|DFN1|MTS|TIM8 translocase of inner mitochondrial membrane 8A protein-coding chr12-1692 chr12 116717511 116717721 + 7.42 0.000 3' UTR (NM_001353625, exon 2 of 2) 3' UTR (NM_001353625, exon 2 of 2) 20453 NM_001353625 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr3-10201 chr3 120507548 120507758 + 7.42 0.000 Intergenic MER50-int|LTR|ERV1 -56661 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr9-3728 chr9 115208522 115208732 + 7.42 0.000 intron (NR_163556, intron 1 of 7) intron (NR_163556, intron 1 of 7) 66809 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr1-14157 chr1 32483287 32483497 + 7.42 0.000 intron (NM_001145720, intron 3 of 3) AluSx3|SINE|Alu 18320 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr3-9584 chr3 55626148 55626358 + 7.42 0.000 intron (NR_132749, intron 16 of 17) intron (NR_132749, intron 16 of 17) 33216 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA chr5-5407 chr5 135754091 135754301 + 7.42 0.000 intron (NM_001349335, intron 3 of 10) SATR2|Satellite|Satellite 48879 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr1-10279 chr1 148091694 148091904 + 7.42 0.000 intron (NR_146087, intron 6 of 7) intron (NR_146087, intron 6 of 7) 42497 NR_146087 728920 NR_146087 PDE4DIPP1 PDE4DIP1 phosphodiesterase 4D interacting protein pseudogene 1 pseudo chr21-1560 chr21 10003255 10003465 + 7.42 0.000 Intergenic Intergenic -182299 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr3-5176 chr3 66517115 66517325 + 7.42 0.000 Intergenic Intergenic -16799 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr11-8416 chr11 102121587 102121797 + 7.42 0.000 intron (NM_001130145, intron 2 of 8) Tigger7|DNA|TcMar-Tigger 9244 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr21-719 chr21 34796964 34797174 + 7.42 0.000 intron (NM_001001890, intron 5 of 5) intron (NM_001001890, intron 5 of 5) 51244 NR_038886 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA chr11-5460 chr11 74388797 74389007 + 7.42 0.000 intron (NM_173582, intron 1 of 13) intron (NM_173582, intron 1 of 13) 9531 NM_173582 283209 Hs.26612 NM_173582 ENSG00000165434 PGM2L1 BM32A|PMMLP phosphoglucomutase 2 like 1 protein-coding chr12-4244 chr12 112450460 112450670 + 7.42 0.000 intron (NM_001330437, intron 3 of 15) intron (NM_001330437, intron 3 of 15) 31618 NM_080601 5781 Hs.506852 NM_002834 ENSG00000179295 PTPN11 BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase non-receptor type 11 protein-coding chr19-3598 chr19 50443004 50443214 + 7.42 0.000 intron (NM_004533, intron 9 of 27) AluJr|SINE|Alu 10217 NM_004533 4606 Hs.85937 NM_004533 ENSG00000086967 MYBPC2 MYBPC|MYBPCF myosin binding protein C, fast type protein-coding chr15-3175 chr15 69293529 69293739 + 7.42 0.000 Intergenic MamRep1879|DNA|hAT-Tip100? -5278 NM_017705 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chr11-8498 chr11 120962460 120962670 + 7.42 0.000 exon (NM_014619, exon 18 of 21) exon (NM_014619, exon 18 of 21) -4526 NR_133004 101929208 Hs.662310 NR_133004 LOC101929208 - uncharacterized LOC101929208 ncRNA chr1-13112 chr1 192083391 192083601 + 7.42 0.000 Intergenic Intergenic -74966 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr2-12676 chr2 75375682 75375892 + 7.42 0.000 Intergenic ERVL-E-int|LTR|ERVL -148281 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr22-2581 chr22 29230944 29231154 + 7.42 0.000 exon (NM_133455, exon 6 of 15) exon (NM_133455, exon 6 of 15) 25153 NM_133455 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr3-7131 chr3 184658691 184658901 + 7.42 0.000 Intergenic Intergenic 53268 NM_022149 64110 Hs.306123 NM_022149 ENSG00000177383 MAGEF1 MAGE-F1 MAGE family member F1 protein-coding chr7-4898 chr7 125032098 125032308 + 7.42 0.000 intron (NR_125718, intron 4 of 10) L1PA10|LINE|L1 -102220 NR_003103 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr12-6965 chr12 27871197 27871407 + 7.42 0.000 Intergenic Intergenic 91069 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr1-9208 chr1 22289532 22289742 + 7.42 0.000 Intergenic Intergenic 23398 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr12-3654 chr12 110588632 110588842 + 7.42 0.000 Intergenic AluSz6|SINE|Alu -5419 NM_139283 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr4-2059 chr4 11436580 11436790 + 7.42 0.000 Intergenic MER1B|DNA|hAT-Charlie -7791 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr15-3036 chr15 59248746 59248956 + 7.42 0.000 intron (NM_004998, intron 4 of 27) intron (NM_004998, intron 4 of 27) 42008 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chrX-3223 chrX 54178282 54178492 + 7.42 0.000 intron (NM_198456, intron 1 of 1) intron (NM_198456, intron 1 of 1) 4867 NM_017848 54954 Hs.86045 NM_017848 ENSG00000184083 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding chr14-3840 chr14 74917836 74918046 + 7.42 0.000 intron (NM_001370253, intron 4 of 10) intron (NM_001370253, intron 4 of 10) 4501 NM_031464 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding chr3-5328 chr3 128936184 128936394 + 7.42 0.000 intron (NM_001348520, intron 9 of 14) L1ME3G|LINE|L1 55608 NM_001348523 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr1-15277 chr1 115288855 115289065 + 7.42 0.000 intron (NM_002506, intron 2 of 2) intron (NM_002506, intron 2 of 2) 5926 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr1-8286 chr1 40665360 40665570 + 7.42 0.000 5' UTR (NM_014747, exon 1 of 8) 5' UTR (NM_014747, exon 1 of 8) 217 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr3-4610 chr3 3160982 3161192 + 7.42 0.000 intron (NM_001173482, intron 5 of 10) intron (NM_001173482, intron 5 of 10) 18630 NM_016302 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr10-7236 chr10 123369988 123370198 + 7.42 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 215691 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr20-3252 chr20 886806 887016 + 7.42 0.000 intron (NM_015985, intron 3 of 8) L2a|LINE|L2 29423 NM_015985 51378 Hs.278973 NM_015985 ENSG00000101280 ANGPT4 ANG3|ANG4 angiopoietin 4 protein-coding chr1-10723 chr1 195602592 195602802 + 7.42 0.000 Intergenic L1MA2|LINE|L1 486018 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr11-7731 chr11 73002251 73002461 + 7.42 0.000 intron (NM_014824, intron 4 of 19) intron (NM_014824, intron 4 of 19) 139962 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr14-1973 chr14 38863061 38863271 + 7.42 0.000 intron (NR_039982, intron 2 of 4) L1PA8|LINE|L1 -19430 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr17-7541 chr17 18138363 18138573 + 7.42 0.000 intron (NM_016239, intron 16 of 64) L2c|LINE|L2 29712 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr8-3070 chr8 18747883 18748093 + 7.42 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 60879 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr19-2326 chr19 33402592 33402802 + 7.42 0.000 intron (NM_001166056, intron 9 of 12) intron (NM_001166056, intron 9 of 12) 28173 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr11-8514 chr11 124452982 124453192 + 7.42 0.000 Intergenic L1MA5A|LINE|L1 -12002 NM_012378 26493 Hs.351822 NM_012378 ENSG00000197125 OR8B8 TPCR85 olfactory receptor family 8 subfamily B member 8 protein-coding chr1-6436 chr1 16189134 16189344 + 7.42 0.000 Intergenic Plat_L3|LINE|CR1 23413 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr17-3770 chr17 33994634 33994844 + 7.42 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 162067 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr13-2670 chr13 84912395 84912605 + 7.42 0.000 Intergenic AluJo|SINE|Alu 128846 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr6-7351 chr6 47066911 47067121 + 7.42 0.000 Intergenic MER1B|DNA|hAT-Charlie -24684 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr20-3271 chr20 4645728 4645938 + 7.42 0.000 Intergenic AluSc|SINE|Alu -40623 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr9-6350 chr9 14487372 14487582 + 7.42 0.000 intron (NM_001369458, intron 1 of 11) intron (NM_001369458, intron 1 of 11) 44600 NM_001369458 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr12-2962 chr12 108351052 108351262 + 7.42 0.000 Intergenic Intergenic -11846 NM_004072 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr5-5952 chr5 97488983 97489193 + 7.42 0.000 Intergenic MER52A|LTR|ERV1 -15608 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr7-6240 chr7 133633221 133633431 + 7.42 0.000 intron (NM_021807, intron 10 of 17) intron (NM_021807, intron 10 of 17) 191562 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr11-10484 chr11 118101207 118101417 + 7.42 0.000 intron (NM_001083947, intron 3 of 12) intron (NM_001083947, intron 3 of 12) -14349 NM_001354434 100526771 Hs.627426 NM_001354434 SMIM35 TMPRSS4-AS1 small integral membrane protein 35 protein-coding chr16-5431 chr16 877364 877574 + 7.42 0.000 intron (NR_147885, intron 6 of 11) intron (NR_147885, intron 6 of 11) -43564 NR_110946 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr9-2625 chr9 18907218 18907428 + 7.42 0.000 intron (NM_001040272, intron 28 of 28) intron (NM_001040272, intron 28 of 28) 125886 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr4-7429 chr4 66815464 66815674 + 7.42 0.000 Intergenic Intergenic 538745 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr5-7394 chr5 23822215 23822425 + 7.42 0.000 Intergenic Intergenic -129028 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA chr12-5431 chr12 122793875 122794085 + 7.42 0.000 intron (NR_027918, intron 6 of 12) intron (NR_027918, intron 6 of 12) 19408 NM_201435 84660 Hs.592008 NM_032573 ENSG00000130783 CCDC62 CT109|ERAP75|TSP-NY coiled-coil domain containing 62 protein-coding chr3-7320 chr3 34270646 34270856 + 7.42 0.000 Intergenic Intergenic 472121 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr1-6695 chr1 53902606 53902816 + 7.42 0.000 intron (NM_001324316, intron 1 of 1) intron (NM_001324316, intron 1 of 1) 8524 NR_136693 1733 Hs.251415 NM_000792 ENSG00000211452 DIO1 5DI|TXDI1 iodothyronine deiodinase 1 protein-coding chr5-6765 chr5 83779302 83779512 + 7.42 0.000 Intergenic MSTD|LTR|ERVL-MaLR -58552 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr18-2410 chr18 8477433 8477643 + 7.42 0.000 Intergenic L1MA8|LINE|L1 -110504 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr12-7095 chr12 44507784 44507994 + 7.42 0.000 TTS (NM_001145109) TTS (NM_001145109) 367772 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr6-3741 chr6 7463921 7464131 + 7.42 0.000 Intergenic LTR40A1|LTR|ERVL 74197 NM_001348194 83732 Hs.437474 NM_031480 ENSG00000124784 RIOK1 AD034|RIO1|RRP10|bA288G3.1 RIO kinase 1 protein-coding chr5-5293 chr5 125525365 125525575 + 7.42 0.000 intron (NR_109887, intron 3 of 3) intron (NR_109887, intron 3 of 3) 32209 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr14-2147 chr14 86837071 86837281 + 7.42 0.000 Intergenic Intergenic -68602 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr15-4805 chr15 72786645 72786855 + 7.42 0.000 intron (NR_040107, intron 1 of 2) intron (NR_040107, intron 1 of 2) -2992 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr13-4179 chr13 89157501 89157711 + 7.42 0.000 Intergenic AluJr|SINE|Alu -77685 NR_047025 100874172 Hs.569291 NR_047025 LINC00440 - long intergenic non-protein coding RNA 440 ncRNA chr8-6918 chr8 102569053 102569263 + 7.42 0.000 Intergenic LTR33|LTR|ERVL 17569 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr17-2168 chr17 49952512 49952722 + 7.42 0.000 Intergenic Intergenic -16573 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr2-10722 chr2 29325024 29325234 + 7.42 0.000 intron (NM_004304, intron 6 of 28) intron (NM_004304, intron 6 of 28) -101229 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr9-4559 chr9 87899834 87900044 + 7.42 0.000 intron (NR_149022, intron 3 of 3) intron (NR_149022, intron 3 of 3) 17062 NM_178828 286234 Hs.130672 NM_178828 ENSG00000177992 SPATA31E1 C9orf79|FAM75E1 SPATA31 subfamily E member 1 protein-coding chr18-2448 chr18 33626554 33626764 + 7.42 0.000 intron (NM_030632, intron 2 of 11) intron (NM_030632, intron 2 of 11) 48440 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr5-3124 chr5 55920764 55920974 + 7.42 0.000 intron (NM_001242637, intron 15 of 15) MER20|DNA|hAT-Charlie 67547 NM_001242639 133396 Hs.55378 NM_139017 ENSG00000164509 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding chr8-7175 chr8 123855210 123855420 + 7.42 0.000 intron (NM_001039112, intron 1 of 40) intron (NM_001039112, intron 1 of 40) 3328 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chrX-4733 chrX 91415558 91415768 + 7.42 0.000 intron (NR_110659, intron 3 of 3) intron (NR_110659, intron 3 of 3) -19176 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr3-10812 chr3 161777203 161777413 + 7.42 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 280500 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr18-2331 chr18 11757555 11757765 + 7.42 0.000 intron (NM_001369387, intron 4 of 11) L2|LINE|L2 5575 NM_001369387 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr6-4291 chr6 13954477 13954687 + 7.42 0.000 intron (NM_001165033, intron 1 of 1) MER30|DNA|hAT-Charlie 29389 NM_001165033 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chrX-1752 chrX 49109401 49109611 + 7.42 0.000 Intergenic AluY|SINE|Alu -8385 NM_007075 11152 Hs.632807 NM_007075 ENSG00000196998 WDR45 JM5|NBIA4|NBIA5|WDRX1|WIPI-4|WIPI4 WD repeat domain 45 protein-coding chr1-14105 chr1 30927645 30927855 + 7.42 0.000 Intergenic MER34B-int|LTR|ERV1 8026 NR_004054 692234 NR_004054 SNORD103A U103 small nucleolar RNA, C/D box 103A snoRNA chr16-3884 chr16 73854219 73854429 + 7.42 0.000 Intergenic AluSx1|SINE|Alu 361197 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr1-16101 chr1 203651392 203651602 + 7.42 0.000 intron (NM_001365784, intron 1 of 20) L1ME3F|LINE|L1 23560 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr16-5607 chr16 57206598 57206808 + 7.42 0.000 intron (NM_001305164, intron 2 of 14) AluJr|SINE|Alu 20374 NM_133368 89970 Hs.460885 NM_133368 ENSG00000159579 RSPRY1 SEMDFA ring finger and SPRY domain containing 1 protein-coding chr3-10645 chr3 148333163 148333373 + 7.42 0.000 intron (NR_146712, intron 3 of 4) L2c|LINE|L2 52377 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr2-11888 chr2 23657818 23658028 + 7.42 0.000 intron (NM_052920, intron 5 of 13) intron (NM_052920, intron 5 of 13) 269200 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr12-6794 chr12 10255502 10255712 + 7.42 0.000 intron (NM_001351060, intron 2 of 8) L1M4|LINE|L1 16646 NM_001351060 3824 Hs.562457 NM_002262 ENSG00000134539 KLRD1 CD94 killer cell lectin like receptor D1 protein-coding chr13-1647 chr13 64928956 64929166 + 7.42 0.000 Intergenic ERVL-B4-int|LTR|ERVL -853050 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr11-4780 chr11 131466180 131466390 + 7.42 0.000 intron (NM_001352003, intron 1 of 8) MIR|SINE|MIR 74582 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr22-1139 chr22 44692142 44692352 + 7.42 0.000 intron (NM_001198721, intron 2 of 9) intron (NM_001198721, intron 2 of 9) -9951 NM_181334 553158 Hs.102336 NM_181334 ENSG00000248405 PRR5-ARHGAP8 - PRR5-ARHGAP8 readthrough protein-coding chr4-7513 chr4 74757615 74757825 + 7.42 0.000 intron (NM_001316963, intron 2 of 4) intron (NM_001316963, intron 2 of 4) 36803 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr11-7444 chr11 119906903 119907113 + 7.42 0.000 Intergenic L2c|LINE|L2 177425 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr3-4835 chr3 142958969 142959179 + 7.42 0.000 Intergenic Intergenic 4600 NM_198504 344838 Hs.408385 NM_198504 ENSG00000188582 PAQR9 - progestin and adipoQ receptor family member 9 protein-coding chr22-3956 chr22 37775468 37775678 + 7.42 0.000 3' UTR (NM_007032, exon 14 of 14) 3' UTR (NM_007032, exon 14 of 14) 29339 NM_007032 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr10-8042 chr10 63832009 63832219 + 7.42 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -310224 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr2-5033 chr2 235339905 235340115 + 7.42 0.000 Intergenic Intergenic -154033 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr9-2647 chr9 33629068 33629278 + 7.42 0.000 Intergenic Intergenic 4948 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr22-3313 chr22 19220614 19220824 + 7.42 0.000 intron (NM_007098, intron 17 of 32) intron (NM_007098, intron 17 of 32) -41856 NR_046298 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CMS23|CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr7-3938 chr7 129454211 129454421 + 7.42 0.000 intron (NM_020704, intron 6 of 20) intron (NM_020704, intron 6 of 20) 19884 NM_020704 57464 Hs.489988 NM_020704 ENSG00000128578 STRIP2 FAM40B|FAR11B striatin interacting protein 2 protein-coding chr7-8103 chr7 25956626 25956836 + 7.42 0.000 Intergenic Intergenic -6745 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr15-3195 chr15 71080947 71081157 + 7.42 0.000 Intergenic Intergenic -60397 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr4-5244 chr4 169492390 169492600 + 7.42 0.000 intron (NM_001199400, intron 20 of 32) L1P4a|LINE|L1 120088 NM_001199398 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr6-7044 chr6 26097372 26097582 + 7.42 0.000 3' UTR (NM_139003, exon 5 of 5) 3' UTR (NM_139003, exon 5 of 5) -6443 NR_144383 108783645 Hs.233325 NR_144383 LOC108783645 - HFE antisense RNA ncRNA chr8-6539 chr8 68641076 68641286 + 7.42 0.000 intron (NR_146187, intron 8 of 13) intron (NR_146187, intron 8 of 13) -309690 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr20-1265 chr20 44129981 44130191 + 7.42 0.000 intron (NM_020433, intron 2 of 5) (AACAA)n|Simple_repeat|Simple_repeat 57102 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr5-3096 chr5 41371805 41372015 + 7.42 0.000 intron (NM_001005473, intron 2 of 2) intron (NM_001005473, intron 2 of 2) -110441 NM_001115131 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding chr6-8597 chr6 167018081 167018291 + 7.42 0.000 intron (NM_007045, intron 7 of 12) MLT1C|LTR|ERVL-MaLR 18789 NM_194429 11116 Hs.487175 NM_007045 ENSG00000213066 FGFR1OP FOP FGFR1 oncogene partner protein-coding chr2-5957 chr2 42116803 42117013 + 7.42 0.000 Intergenic Intergenic -52445 NM_019063 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr13-4254 chr13 97165604 97165814 + 7.42 0.000 Intergenic Intergenic 13913 NR_125725 103625683 Hs.679591 NR_125725 ENSG00000233124 LINC00456 - long intergenic non-protein coding RNA 456 ncRNA chr19-6213 chr19 5867046 5867256 + 7.42 0.000 exon (NM_002034, exon 2 of 2) exon (NM_002034, exon 2 of 2) 3389 NM_002034 2527 Hs.631843 NM_002034 ENSG00000130383 FUT5 FUC-TV fucosyltransferase 5 protein-coding KV880768.1-1 KV880768.1 324299 324509 + 7.42 0.000 NA NA NA NA chr10-8782 chr10 105654056 105654266 + 7.42 0.000 Intergenic MER45A|DNA|hAT-Tip100 166172 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr7-9665 chr7 151924267 151924477 + 7.42 0.000 Intergenic LTR33|LTR|ERVL -32074 NR_033169 168391 Hs.647077 NM_145292 ENSG00000106648 GALNTL5 GALNACT19|GALNT15|GalNAc-T5L polypeptide N-acetylgalactosaminyltransferase like 5 protein-coding chr17-6995 chr17 50831473 50831683 + 7.42 0.000 Intergenic Intergenic -3006 NM_001330341 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr4-8241 chr4 139139937 139140147 + 7.42 0.000 intron (NM_001371339, intron 1 of 9) AluJr|SINE|Alu 37176 NM_001371338 chr14-5145 chr14 90804947 90805157 + 7.42 0.000 intron (NM_001320421, intron 1 of 20) intron (NM_001320421, intron 1 of 20) 11365 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chrX-894 chrX 55748738 55748948 + 7.42 0.000 intron (NR_148687, intron 6 of 12) SVA_D|Retroposon|SVA 31094 NM_016656 10325 Hs.50282 NM_006064 ENSG00000083750 RRAGB RAGB|bA465E19.1 Ras related GTP binding B protein-coding chr16-4676 chr16 78319037 78319247 + 7.42 0.000 intron (NM_001291997, intron 4 of 7) MLT1D|LTR|ERVL-MaLR 219488 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr16-6583 chr16 66777523 66777733 + 7.42 0.000 intron (NM_001136505, intron 10 of 18) intron (NM_001136505, intron 10 of 18) 23992 NM_001136505 283847 Hs.376505 NM_173616 ENSG00000249961 TERB1 CCDC79 telomere repeat binding bouquet formation protein 1 protein-coding chr17-5250 chr17 17952033 17952243 + 7.42 0.000 intron (NM_001288787, intron 1 of 13) L1ME3G|LINE|L1 20262 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr12-7064 chr12 41380876 41381086 + 7.42 0.000 intron (NM_001164595, intron 3 of 9) L1MA9|LINE|L1 -56758 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr9-4468 chr9 29697083 29697293 + 7.42 0.000 Intergenic Intergenic -483587 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr3-7628 chr3 23914140 23914350 + 7.42 0.000 intron (NM_020345, intron 1 of 4) intron (NM_020345, intron 1 of 4) -2300 NM_001253379 6138 Hs.381219 NM_002948 ENSG00000174748 RPL15 DBA12|EC45|L15|RPL10|RPLY10|RPYL10 ribosomal protein L15 protein-coding chr6-2777 chr6 134145999 134146209 + 7.42 0.000 Intergenic Intergenic -28424 NR_037938 387065 Hs.571061 NR_037938 HMGA1P7 HMGA1L7 high mobility group AT-hook 1 pseudogene 7 pseudo chr3-10110 chr3 112364196 112364406 + 7.42 0.000 Intergenic Intergenic 31145 NR_158642 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding chr12-2944 chr12 95547719 95547929 + 7.42 0.000 intron (NR_125360, intron 1 of 5) intron (NR_125360, intron 1 of 5) 414 NM_001278393 84101 Hs.646421 NM_032147 ENSG00000136014 USP44 - ubiquitin specific peptidase 44 protein-coding chr8-6110 chr8 27820143 27820353 + 7.42 0.000 intron (NM_001278945, intron 6 of 7) intron (NM_001278945, intron 6 of 7) 17569 NM_001363040 55872 Hs.104741 NM_018492 ENSG00000168078 PBK CT84|HEL164|Nori-3|SPK|TOPK PDZ binding kinase protein-coding chr2-9979 chr2 11104083 11104293 + 7.42 0.000 intron (NR_040080, intron 8 of 8) intron (NR_040080, intron 8 of 8) 27988 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr1-12478 chr1 18730273 18730483 + 7.42 0.000 intron (NM_001135254, intron 7 of 8) intron (NM_001135254, intron 7 of 8) 99532 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr1-6360 chr1 7982214 7982424 + 7.42 0.000 intron (NM_001123377, intron 6 of 6) intron (NM_001123377, intron 6 of 6) 20608 NM_007262 11315 Hs.419640 NM_007262 ENSG00000116288 PARK7 DJ-1|DJ1|GATD2|HEL-S-67p Parkinsonism associated deglycase protein-coding chr16-6305 chr16 47617967 47618177 + 7.42 0.000 intron (NM_001031835, intron 15 of 31) intron (NM_001031835, intron 15 of 31) 156741 NM_001031835 5257 Hs.78060 NM_000293 ENSG00000102893 PHKB - phosphorylase kinase regulatory subunit beta protein-coding chr15-4893 chr15 76557046 76557256 + 7.42 0.000 intron (NR_148227, intron 23 of 32) L1PA15|LINE|L1 -29496 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr8-6873 chr8 100647795 100648005 + 7.42 0.000 intron (NM_152628, intron 2 of 13) intron (NM_152628, intron 2 of 13) 1765 NM_152628 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr19-4512 chr19 7672217 7672427 + 7.42 0.000 Intergenic MER1A|DNA|hAT-Charlie 3273 NM_020415 56729 Hs.283091 NM_020415 ENSG00000104918 RETN ADSF|FIZZ3|RETN1|RSTN|XCP1 resistin protein-coding chr4-6494 chr4 153988380 153988590 + 7.42 0.000 Intergenic Intergenic -199402 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr22-3728 chr22 25894471 25894681 + 7.42 0.000 intron (NM_001318245, intron 27 of 43) intron (NM_001318245, intron 27 of 43) 152388 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr3-11253 chr3 197224084 197224294 + 7.42 0.000 intron (NM_001366216, intron 4 of 23) intron (NM_001366216, intron 4 of 23) -40058 NM_001204388 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr4-5186 chr4 158821351 158821561 + 7.42 0.000 intron (NM_001366843, intron 1 of 17) intron (NM_001366843, intron 1 of 17) 15617 NM_001323916 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr16-6514 chr16 61608272 61608482 + 7.42 0.000 Intergenic LTR16A2|LTR|ERVL 428061 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chrX-4253 chrX 39649014 39649224 + 7.42 0.000 Intergenic Intergenic -12097 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr11-2246 chr11 83316474 83316684 + 7.42 0.000 Intergenic SVA_D|Retroposon|SVA -30172 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr22-2864 chr22 45018970 45019180 + 7.42 0.000 Intergenic Intergenic -9070 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr18-3340 chr18 57233070 57233280 + 7.42 0.000 Intergenic Intergenic -61981 NR_149129 105372138 Hs.574448 NR_149129 ENSG00000267726 LINC02565 - long intergenic non-protein coding RNA 2565 ncRNA chr8-5620 chr8 99908356 99908566 + 7.42 0.000 Intergenic MER5A1|DNA|hAT-Charlie -14754 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr3-8018 chr3 189947259 189947469 + 7.42 0.000 Intergenic Intergenic 117442 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr6-3533 chr6 38411158 38411368 + 7.42 0.000 intron (NM_001172418, intron 5 of 10) L1M5|LINE|L1 -70333 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chrX-2092 chrX 22751464 22751674 + 7.42 0.000 intron (NR_073010, intron 3 of 11) intron (NR_073010, intron 3 of 11) -248391 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr5-3493 chr5 173314295 173314505 + 7.42 0.000 TTS (NM_003714) TTS (NM_003714) 10670 NR_162132 113219469 NR_162132 MIR12118 - microRNA 12118 ncRNA chr1-14224 chr1 35881756 35881966 + 7.42 0.000 intron (NM_001317123, intron 1 of 18) intron (NM_001317123, intron 1 of 18) -1334 NM_001317122 26523 Hs.22867 NM_012199 ENSG00000092847 AGO1 EIF2C|EIF2C1|GERP95|Q99|hAgo1 argonaute RISC component 1 protein-coding chr20-1921 chr20 7003311 7003521 + 7.42 0.000 Intergenic Intergenic 235730 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr2-6829 chr2 64958554 64958764 + 7.42 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -26212 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr17-2057 chr17 58156860 58157070 + 7.42 0.000 promoter-TSS (NR_002307) promoter-TSS (NR_002307) 6 NR_002307 55545 Hs.381329 NR_002307 MSX2P1 HPX5|HSHPX5|MSX2P msh homeobox 2 pseudogene 1 pseudo chr4-5858 chr4 120338503 120338713 + 7.42 0.000 Intergenic L1MEj|LINE|L1 -271760 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr7-7349 chr7 51625573 51625783 + 7.42 0.000 Intergenic Intergenic -232422 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr11-6151 chr11 43009224 43009434 + 7.42 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 260040 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo chr7-7194 chr7 12839910 12840120 + 7.42 0.000 Intergenic L1PA7|LINE|L1 152382 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding GL000225.1-36 GL000225.1 140504 140714 + 7.42 0.000 NA NA NA NA chr22-1249 chr22 19766716 19766926 + 7.42 0.000 exon (NM_080647, exon 9 of 9) exon (NM_080647, exon 9 of 9) 10118 NM_080646 6899 Hs.173984 NM_005992 ENSG00000184058 TBX1 CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS T-box transcription factor 1 protein-coding KI270730.1-4 KI270730.1 92690 92900 + 7.42 0.000 NA NA NA NA chr10-8938 chr10 116671538 116671748 + 7.42 0.000 3' UTR (NM_025015, exon 12 of 12) 3' UTR (NM_025015, exon 12 of 12) -1361 NM_001330142 143379 Hs.121347 NM_144661 ENSG00000165863 C10orf82 - chromosome 10 open reading frame 82 protein-coding chr9-4244 chr9 89864481 89864691 + 7.42 0.000 Intergenic Intergenic -104830 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr6-5734 chr6 150541263 150541473 + 7.42 0.000 Intergenic MER5A1|DNA|hAT-Charlie -58517 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chrX-5054 chrX 123732995 123733205 + 7.42 0.000 promoter-TSS (NM_001081550) promoter-TSS (NM_001081550) -48 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr8-2668 chr8 84075301 84075511 + 7.42 0.000 Intergenic L1PA16|LINE|L1 -107381 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr1-9942 chr1 77951140 77951350 + 7.42 0.000 intron (NM_003902, intron 18 of 19) intron (NM_003902, intron 18 of 19) 27827 NR_130152 8880 Hs.567380 NM_003902 ENSG00000162613 FUBP1 FBP|FUBP|hDH V far upstream element binding protein 1 protein-coding chr20-2412 chr20 21160108 21160318 + 7.42 0.000 intron (NM_018474, intron 4 of 12) MER54A|LTR|ERVL 34131 NM_001163022 55857 Hs.187635 NM_018474 ENSG00000088970 KIZ C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69 kizuna centrosomal protein protein-coding chr4-6212 chr4 55666175 55666385 + 7.42 0.000 Intergenic L3|LINE|CR1 -29487 NR_120489 10874 Hs.418367 NM_006681 ENSG00000109255 NMU - neuromedin U protein-coding chr17-5907 chr17 74288805 74289015 + 7.42 0.000 intron (NM_023036, intron 4 of 13) intron (NM_023036, intron 4 of 13) 14676 NR_148379 64446 Hs.147472 NM_023036 ENSG00000171595 DNAI2 CILD9|DIC2 dynein axonemal intermediate chain 2 protein-coding chr2-11789 chr2 15486093 15486303 + 7.42 0.000 intron (NR_052013, intron 12 of 50) intron (NR_052013, intron 12 of 50) 75136 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr3-7565 chr3 197628941 197629151 + 7.42 0.000 Intergenic AluSp|SINE|Alu -1165 NR_003266 220729 Hs.478854 NR_003266 ENSG00000214135 LOC220729 - succinate dehydrogenase complex flavoprotein subunit A pseudogene pseudo chr7-4790 chr7 82044634 82044844 + 7.42 0.000 intron (NM_000722, intron 10 of 38) intron (NM_000722, intron 10 of 38) 35562 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr20-4473 chr20 62669804 62670014 + 7.42 0.000 intron (NM_016354, intron 11 of 11) intron (NM_016354, intron 11 of 11) -3288 NR_024470 100127888 Hs.671273 NR_024470 ENSG00000232803 SLCO4A1-AS1 - SLCO4A1 antisense RNA 1 ncRNA chr6-7886 chr6 107727483 107727693 + 7.42 0.000 intron (NM_001286408, intron 4 of 6) intron (NM_001286408, intron 4 of 6) 4562 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr2-12328 chr2 47771274 47771484 + 7.42 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -11703 NM_001281492 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr1-13728 chr1 15596867 15597077 + 7.42 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -11921 NM_024758 79814 Hs.461532 NM_024758 ENSG00000116771 AGMAT - agmatinase protein-coding chr12-5263 chr12 109689767 109689977 + 7.42 0.000 Intergenic AluJr|SINE|Alu -23953 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr3-4411 chr3 4022751 4022961 + 7.42 0.000 Intergenic Intergenic -221981 NR_149025 100130207 Hs.587205 NR_149025 ENSG00000144455 LOC100130207 - uncharacterized LOC100130207 ncRNA chr6-6238 chr6 25229523 25229733 + 7.42 0.000 Intergenic Intergenic 31779 NR_110862 101928663 Hs.561600 NR_110862 LOC101928663 - uncharacterized LOC101928663 ncRNA chr8-3034 chr8 138086498 138086708 + 7.42 0.000 Intergenic AluSx1|SINE|Alu -3058 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chr6-2780 chr6 135880666 135880876 + 7.42 0.000 intron (NM_018945, intron 1 of 12) intron (NM_018945, intron 1 of 12) 29070 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr5-8269 chr5 112598186 112598396 + 7.42 0.000 Intergenic Intergenic -30145 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr13-2895 chr13 112981009 112981219 + 7.42 0.000 intron (NM_001320816, intron 1 of 29) intron (NM_001320816, intron 1 of 29) 1748 NM_001320816 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr13-3038 chr13 27552217 27552427 + 7.42 0.000 intron (NM_153371, intron 8 of 9) intron (NM_153371, intron 8 of 9) 68207 NM_153371 222484 Hs.132359 NM_153371 ENSG00000139517 LNX2 PDZRN1 ligand of numb-protein X 2 protein-coding chr11-8433 chr11 109319574 109319784 + 7.42 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -102511 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr16-5212 chr16 22993706 22993916 + 7.42 0.000 Intergenic LTR89|LTR|ERVL? 155459 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr8-5589 chr8 90181460 90181670 + 7.42 0.000 Intergenic L2a|LINE|L2 -39923 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr10-5867 chr10 115450810 115451020 + 7.42 0.000 intron (NM_207303, intron 21 of 28) L1PA14|LINE|L1 357550 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr11-9147 chr11 34169242 34169452 + 7.42 0.000 intron (NM_145804, intron 5 of 16) intron (NM_145804, intron 5 of 16) 63718 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr1-10974 chr1 214902782 214902992 + 7.31 0.000 Intergenic Intergenic -102655 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr10-7173 chr10 104488228 104488438 + 7.31 0.000 Intergenic Intergenic -8058 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr15-3890 chr15 96406687 96406897 + 7.31 0.000 Intergenic Intergenic 73027 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr9-7035 chr9 122238646 122238856 + 7.31 0.000 non-coding (NR_027126, exon 7 of 7) non-coding (NR_027126, exon 7 of 7) -9794 NM_199160 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr21-1841 chr21 41561555 41561765 + 7.31 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -53502 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr19-5728 chr19 17545931 17546141 + 7.31 0.000 intron (NM_001098524, intron 13 of 15) LTR13|LTR|ERVK -9613 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr11-9860 chr11 73224569 73224779 + 7.31 0.000 intron (NM_176071, intron 1 of 2) intron (NM_176071, intron 1 of 2) 6112 NM_176071 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chrX-5156 chrX 131961668 131961878 + 7.31 0.000 Intergenic L1HS|LINE|L1 -61529 NM_001042453 51765 Hs.444247 NM_016542 ENSG00000134602 STK26 MASK|MST4 serine/threonine kinase 26 protein-coding chr6-6872 chr6 10471530 10471740 + 7.31 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 31918 NR_049872 100846998 NR_049872 ENSG00000263705 MIR5689 - microRNA 5689 ncRNA chr7-5001 chr7 492730 492940 + 7.31 0.000 Intergenic Intergenic 27009 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr17-8247 chr17 66136097 66136307 + 7.31 0.000 intron (NM_001353129, intron 4 of 26) L1M3d|LINE|L1 55690 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr7-5547 chr7 45686053 45686263 + 7.31 0.000 exon (NM_021116, exon 13 of 20) exon (NM_021116, exon 13 of 20) 82860 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr8-3064 chr8 17313235 17313445 + 7.31 0.000 exon (NM_004686, exon 8 of 14) exon (NM_004686, exon 8 of 14) 66382 NM_001363171 137492 Hs.343873 NM_152415 ENSG00000155975 VPS37A HCRP1|PQBP2|SPG53 VPS37A subunit of ESCRT-I protein-coding chr3-9028 chr3 21756585 21756795 + 7.31 0.000 Intergenic Intergenic -5480 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chrX-2843 chrX 139103446 139103656 + 7.31 0.000 intron (NM_001139501, intron 2 of 7) L1MB8|LINE|L1 101472 NM_001139501 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr6-5011 chr6 109705335 109705545 + 7.31 0.000 intron (NM_014845, intron 1 of 22) intron (NM_014845, intron 1 of 22) 14219 NM_014845 9896 Hs.529959 NM_014845 ENSG00000112367 FIG4 ALS11|BTOP|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding chr1-16134 chr1 205180007 205180217 + 7.31 0.000 intron (NM_199462, intron 2 of 11) L1PA8|LINE|L1 31590 NM_199462 25778 Hs.6874 NM_015375 ENSG00000133059 DSTYK CAKUT1|DustyPK|HDCMD38P|RIP5|RIPK5|SPG23 dual serine/threonine and tyrosine protein kinase protein-coding chr4-7737 chr4 91680681 91680891 + 7.31 0.000 Intergenic Intergenic 596516 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr17-6221 chr17 13982041 13982251 + 7.31 0.000 Intergenic Intergenic -42352 NR_003261 94158 Hs.633073 NR_003261 CDRT15P1 CDRT15P CMT1A duplicated region transcript 15 pseudogene 1 pseudo chr1-7843 chr1 76154253 76154463 + 7.31 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 79612 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr17-6578 chr17 48279471 48279681 + 7.31 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -14771 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr6-2948 chr6 35248917 35249127 + 7.31 0.000 3' UTR (NM_152753, exon 22 of 22) 3' UTR (NM_152753, exon 22 of 22) -10713 NM_003427 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr12-4620 chr12 41124614 41124824 + 7.31 0.000 Intergenic MIR|SINE|MIR -63601 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr4-5972 chr4 175907332 175907542 + 7.31 0.000 intron (NR_048571, intron 1 of 5) intron (NR_048571, intron 1 of 5) -94323 NM_201591 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr4-5864 chr4 121801035 121801245 + 7.31 0.000 promoter-TSS (NM_001034194) promoter-TSS (NM_001034194) -183 NM_005033 5393 Hs.91728 NM_005033 ENSG00000123737 EXOSC9 PCH1D|PM/Scl-75|PMSCL1|RRP45|Rrp45p|p5|p6 exosome component 9 protein-coding chrX-5186 chrX 133815750 133815960 + 7.31 0.000 intron (NM_001164619, intron 1 of 6) intron (NM_001164619, intron 1 of 6) -81588 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr14-2540 chr14 22372869 22373079 + 7.31 0.000 Intergenic LTR33C|LTR|ERVL 59779 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr2-13781 chr2 172161980 172162190 + 7.31 0.000 Intergenic MER52D|LTR|ERV1 59079 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr3-5941 chr3 45037728 45037938 + 7.31 0.000 Intergenic Intergenic 7690 NM_001308394 7123 Hs.476092 NM_003278 ENSG00000163815 CLEC3B TN|TNA C-type lectin domain family 3 member B protein-coding chr12-4853 chr12 58851025 58851235 + 7.31 0.000 Intergenic Intergenic 68416 NM_001136051 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr17-5344 chr17 29163775 29163985 + 7.31 0.000 intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) 12893 NM_001346767 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr15-1969 chr15 40096374 40096584 + 7.31 0.000 intron (NM_001003943, intron 3 of 3) MIRc|SINE|MIR 9607 NM_001003942 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr8-6807 chr8 96237608 96237818 + 7.31 0.000 Intergenic Intergenic -2079 NM_001199975 7381 Hs.131255 NM_006294 ENSG00000156467 UQCRB MC3DN3|QCR7|QP-C|QPC|UQBC|UQBP|UQCR6|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding chr2-10879 chr2 65656544 65656754 + 7.31 0.000 Intergenic Intergenic -224050 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr5-7074 chr5 172906740 172906950 + 7.31 0.000 intron (NM_001031711, intron 3 of 9) intron (NM_001031711, intron 3 of 9) -8238 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr11-8867 chr11 13850283 13850493 + 7.31 0.000 intron (NR_149109, intron 3 of 3) intron (NR_149109, intron 3 of 3) 20228 NR_149109 105376561 Hs.512244 NR_149109 ENSG00000254930 LINC02545 - long intergenic non-protein coding RNA 2545 ncRNA chr8-7443 chr8 140935028 140935238 + 7.31 0.000 intron (NM_001352699, intron 1 of 35) intron (NM_001352699, intron 1 of 35) 65871 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr1-15062 chr1 95426443 95426653 + 7.31 0.000 Intergenic Intergenic -48189 NR_033966 440594 Hs.514123 NR_033966 ENSG00000233907 LINC01761 - long intergenic non-protein coding RNA 1761 ncRNA chr20-2270 chr20 3502534 3502744 + 7.31 0.000 intron (NM_001323332, intron 1 of 25) L1MDa|LINE|L1 31621 NM_001323332 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr1-16488 chr1 229347874 229348084 + 7.31 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -4932 NM_145257 126731 Hs.585011 NM_145257 ENSG00000154429 CCSAP C1orf96|CSAP centriole, cilia and spindle associated protein protein-coding chr5-8568 chr5 136821311 136821521 + 7.31 0.000 Intergenic Intergenic -306781 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr22-1612 chr22 23627615 23627825 + 7.31 0.000 intron (NM_016449, intron 1 of 11) intron (NM_016449, intron 1 of 11) 4601 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr17-6245 chr17 27430955 27431165 + 7.31 0.000 non-coding (NR_033892, exon 13 of 13) non-coding (NR_033892, exon 13 of 13) 13055 NR_033892 440419 Hs.385755 NR_033892 ENSG00000266433 TBC1D3P5 - TBC1 domain family member 3 pseudogene 5 pseudo chr14-4876 chr14 71365032 71365242 + 7.31 0.000 intron (NM_001354285, intron 2 of 24) AluJb|SINE|Alu -33200 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA chr16-3698 chr16 1604578 1604788 + 7.31 0.000 intron (NR_135176, intron 2 of 2) L2|LINE|L2 7389 NM_014714 9742 Hs.389438 NM_014714 ENSG00000187535 IFT140 MZSDS|RP80|SRTD9|WDTC2|c305C8.4|c380F5.1|gs114 intraflagellar transport 140 protein-coding chr10-7356 chr10 997618 997828 + 7.31 0.000 intron (NM_012341, intron 5 of 16) intron (NM_012341, intron 5 of 16) 9289 NM_012341 23560 Hs.215766 NM_012341 ENSG00000107937 GTPBP4 CRFG|NGB|NOG1 GTP binding protein 4 protein-coding chr12-4593 chr12 32775804 32776014 + 7.31 0.000 Intergenic MIR|SINE|MIR -20012 NM_001040436 51067 Hs.505231 NM_015936 ENSG00000139131 YARS2 CGI-04|MLASA2|MT-TYRRS|TYRRS tyrosyl-tRNA synthetase 2 protein-coding chr3-8912 chr3 12914932 12915142 + 7.31 0.000 intron (NM_001330619, intron 8 of 12) intron (NM_001330619, intron 8 of 12) -29826 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr11-10048 chr11 83713807 83714017 + 7.31 0.000 intron (NM_001142699, intron 18 of 27) intron (NM_001142699, intron 18 of 27) -31487 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr5-6471 chr5 176041382 176041592 + 7.31 0.000 Intergenic Intergenic 20568 NR_103794 100996385 Hs.382347 NR_103794 ENSG00000248469 LOC100996385 - uncharacterized LOC100996385 ncRNA chr10-8769 chr10 104544357 104544567 + 7.31 0.000 Intergenic MSTB|LTR|ERVL-MaLR -64187 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr17-5684 chr17 50800628 50800838 + 7.31 0.000 Intergenic L2|LINE|L2 32083 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr12-5290 chr12 110900158 110900368 + 7.31 0.000 intron (NM_152591, intron 10 of 11) L1MC|LINE|L1 20337 NM_000432 4633 Hs.75535 NM_000432 ENSG00000111245 MYL2 CMH10|MLC-2s/v|MLC2 myosin light chain 2 protein-coding chr9-6536 chr9 112632882 112633092 + 7.31 0.000 intron (NM_001287036, intron 3 of 4) L1ME3G|LINE|L1 85130 NR_138054 58493 Hs.658575 NM_021218 ENSG00000148153 INIP C9orf80|HSPC043|MISE|SOSSC|SSBIP1|hSSBIP1 INTS3 and NABP interacting protein protein-coding chr16-4227 chr16 17517935 17518145 + 7.31 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -47080 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chrX-1982 chrX 11498960 11499170 + 7.31 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) -71247 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr12-6328 chr12 54837417 54837627 + 7.31 0.000 Intergenic AluY|SINE|Alu -16994 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr11-2545 chr11 86578135 86578345 + 7.31 0.000 intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 93958 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr2-11996 chr2 27834135 27834345 + 7.31 0.000 intron (NM_022128, intron 5 of 7) intron (NM_022128, intron 5 of 7) -54469 NM_001329112 9577 Hs.258314 NM_004899 ENSG00000158019 BABAM2 BRCC4|BRCC45|BRE BRISC and BRCA1 A complex member 2 protein-coding chr16-4722 chr16 83574507 83574717 + 7.31 0.000 intron (NM_001220489, intron 6 of 12) MIRb|SINE|MIR 66266 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr1-13744 chr1 16067136 16067346 + 7.31 0.000 intron (NM_182623, intron 1 of 6) intron (NM_182623, intron 1 of 6) 6410 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr10-8361 chr10 80400301 80400511 + 7.31 0.000 Intergenic MER77B|LTR|ERVL -7423 NM_001243779 84293 Hs.500333 NM_032333 ENSG00000122378 PRXL2A Adrx|C10orf58|FAM213A|PAMM peroxiredoxin like 2A protein-coding chr8-4721 chr8 141505844 141506054 + 7.31 0.000 intron (NR_160399, intron 1 of 29) intron (NR_160399, intron 1 of 29) 1280 NR_160399 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr3-9247 chr3 38856128 38856338 + 7.31 0.000 intron (NM_014139, intron 24 of 25) L1PB2|LINE|L1 -62223 NM_006514 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr14-3348 chr14 90290316 90290526 + 7.31 0.000 exon (NM_017970, exon 10 of 14) exon (NM_017970, exon 10 of 14) 32482 NM_001330212 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr18-2872 chr18 9553980 9554190 + 7.31 0.000 intron (NR_052003, intron 15 of 19) L1MC4|LINE|L1 60474 NM_005134 9989 Hs.743236 NM_005134 ENSG00000154845 PPP4R1 MEG1|PP4(Rmeg)|PP4R1 protein phosphatase 4 regulatory subunit 1 protein-coding chrX-4705 chrX 87356988 87357198 + 7.31 0.000 Intergenic L1MA1|LINE|L1 -160709 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr1-4835 chr1 25927267 25927477 + 7.31 0.000 Intergenic Intergenic -20495 NM_203399 3925 Hs.209983 NM_005563 ENSG00000117632 STMN1 C1orf215|LAP18|Lag|OP18|PP17|PP19|PR22|SMN stathmin 1 protein-coding chr4-5339 chr4 183721420 183721630 + 7.31 0.000 Intergenic Intergenic 62232 NM_021942 60684 Hs.443240 NM_021942 ENSG00000168538 TRAPPC11 C4orf41|FOIGR|GRY|LGMD2S|LGMDR18 trafficking protein particle complex 11 protein-coding chr2-4128 chr2 160338722 160338932 + 7.31 0.000 intron (NM_002897, intron 2 of 13) intron (NM_002897, intron 2 of 13) -66932 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chrX-4757 chrX 94984016 94984226 + 7.31 0.000 Intergenic L1MA2|LINE|L1 79105 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr2-6195 chr2 10778896 10779106 + 7.31 0.000 intron (NM_001039362, intron 12 of 13) intron (NM_001039362, intron 12 of 13) 33784 NM_005742 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr9-7437 chr9 25426102 25426312 + 7.31 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 252651 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr4-6867 chr4 10184349 10184559 + 7.31 0.000 Intergenic Intergenic -67655 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr4-8368 chr4 148393528 148393738 + 7.31 0.000 intron (NM_000901, intron 2 of 8) MER102b|DNA|hAT-Charlie 48781 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr4-5666 chr4 16627102 16627312 + 7.31 0.000 intron (NM_001304435, intron 2 of 7) intron (NM_001304435, intron 2 of 7) 271438 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr6-7942 chr6 111101480 111101690 + 7.31 0.000 intron (NM_018593, intron 1 of 5) MER46C|DNA|TcMar-Tigger -12249 NR_145796 109623478 NR_145796 SNORD166 - small nucleolar RNA, C/D box 166 snoRNA chr3-5711 chr3 15330243 15330453 + 7.31 0.000 intron (NM_001018009, intron 2 of 8) intron (NM_001018009, intron 2 of 8) 2238 NM_004844 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr3-9780 chr3 71407791 71408001 + 7.31 0.000 intron (NR_146142, intron 3 of 19) intron (NR_146142, intron 3 of 19) -103125 NM_001244812 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr12-8151 chr12 121084974 121085184 + 7.31 0.000 Intergenic MIRc|SINE|MIR -45837 NM_001261825 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr19-6395 chr19 13258218 13258428 + 7.31 0.000 intron (NM_023035, intron 27 of 46) intron (NM_023035, intron 27 of 46) 107912 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr19-5886 chr19 46706534 46706744 + 7.31 0.000 intron (NM_016457, intron 3 of 17) intron (NM_016457, intron 3 of 17) 2715 NR_036157 100422913 NR_036157 ENSG00000211513 MIR320E mir-320e microRNA 320e ncRNA chr1-14769 chr1 68742937 68743147 + 7.31 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -245960 NM_017779 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding chr18-2056 chr18 47697680 47697890 + 7.31 0.000 Intergenic L2c|LINE|L2 232874 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr1-13880 chr1 21647956 21648166 + 7.31 0.000 intron (NM_001350526, intron 5 of 28) intron (NM_001350526, intron 5 of 28) 3837 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr7-5605 chr7 50791873 50792083 + 7.31 0.000 intron (NM_001001555, intron 1 of 16) intron (NM_001001555, intron 1 of 16) 896 NM_001350815 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr7-7854 chr7 5273554 5273764 + 7.31 0.000 Intergenic AluSx|SINE|Alu -9284 NM_153247 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr3-10306 chr3 126446472 126446682 + 7.31 0.000 intron (NR_104249, intron 6 of 8) intron (NR_104249, intron 6 of 8) 29314 NR_104249 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr5-7432 chr5 29676836 29677046 + 7.31 0.000 Intergenic THE1C|LTR|ERVL-MaLR -203619 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chr2-5561 chr2 167747243 167747453 + 7.31 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -71324 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr2-7923 chr2 58944962 58945172 + 7.31 0.000 intron (NR_033873, intron 6 of 13) AluJo|SINE|Alu -272641 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr6-7565 chr6 72111020 72111230 + 7.31 0.000 intron (NM_014989, intron 4 of 33) intron (NM_014989, intron 4 of 33) -101768 NM_001350441 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr2-6516 chr2 197648402 197648612 + 7.31 0.000 intron (NM_144629, intron 1 of 8) intron (NM_144629, intron 1 of 8) 27080 NM_144629 130132 Hs.591615 NM_144629 ENSG00000162944 RFTN2 C2orf11|Raftlin-2 raftlin family member 2 protein-coding chr17-7608 chr17 27033140 27033350 + 7.31 0.000 Intergenic SVA_F|Retroposon|SVA 55996 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr1-9709 chr1 52396054 52396264 + 7.31 0.000 exon (NM_001190819, exon 5 of 17) exon (NM_001190819, exon 5 of 17) 8264 NM_004153 4998 Hs.17908 NM_004153 ENSG00000085840 ORC1 HSORC1|ORC1L|PARC1 origin recognition complex subunit 1 protein-coding chr2-8211 chr2 95404808 95405018 + 7.31 0.000 intron (NM_016044, intron 1 of 7) intron (NM_016044, intron 1 of 7) 2205 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr5-3986 chr5 15269031 15269241 + 7.31 0.000 Intergenic MER74A|LTR|ERVL -2576 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr1-10353 chr1 154434557 154434767 + 7.31 0.000 exon (NM_181359, exon 4 of 9) exon (NM_181359, exon 4 of 9) -28098 NR_147855 101928101 Hs.617089 NR_147855 ENSG00000228013 IL6R-AS1 - IL6R antisense RNA 1 ncRNA chr3-8844 chr3 9201385 9201595 + 7.31 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) 8997 NR_121663 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr2-8353 chr2 109414071 109414281 + 7.31 0.000 intron (NM_001099289, intron 4 of 9) intron (NM_001099289, intron 4 of 9) -100551 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr4-3545 chr4 171900324 171900534 + 7.31 0.000 intron (NM_001034845, intron 2 of 12) AluSc8|SINE|Alu -86822 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr12-7030 chr12 38178051 38178261 + 7.31 0.000 Intergenic Intergenic -138618 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr1-14875 chr1 81085008 81085218 + 7.31 0.000 Intergenic Intergenic -221079 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr8-5647 chr8 109380963 109381173 + 7.31 0.000 intron (NM_177531, intron 2 of 77) MER8|DNA|TcMar-Tigger 18607 NM_177531 93035 Hs.170128 NM_177531 ENSG00000205038 PKHD1L1 PKHDL1 PKHD1 like 1 protein-coding chr6-8258 chr6 138559192 138559402 + 7.31 0.000 intron (NM_020464, intron 1 of 6) intron (NM_020464, intron 1 of 6) 13272 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr11-7533 chr11 12199955 12200165 + 7.31 0.000 intron (NR_144420, intron 3 of 27) intron (NR_144420, intron 3 of 27) 36377 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr19-3193 chr19 47333729 47333939 + 7.31 0.000 intron (NM_001271749, intron 1 of 1) AluYk2|SINE|Alu 1659 NM_001271749 27202 Hs.534412 NM_018485 ENSG00000134830 C5AR2 C5L2|GPF77|GPR77 complement component 5a receptor 2 protein-coding chr10-5239 chr10 65079564 65079774 + 7.31 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -155151 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA chr1-7966 chr1 195972291 195972501 + 7.31 0.000 Intergenic Intergenic 116319 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr1-7845 chr1 76950612 76950822 + 7.31 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 83237 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr4-6499 chr4 155357791 155358001 + 7.31 0.000 intron (NM_001039580, intron 7 of 13) L2a|LINE|L2 3680 NR_125937 102724776 Hs.61271 NR_125937 ENSG00000250910 LOC102724776 - uncharacterized LOC102724776 ncRNA chr8-4950 chr8 117040116 117040326 + 7.31 0.000 intron (NM_001172815, intron 2 of 10) intron (NM_001172815, intron 2 of 10) 89246 NM_001172813 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding KI270723.1-2 KI270723.1 29869 30079 + 7.31 0.000 NA NA NA NA chr7-4964 chr7 148009382 148009592 + 7.31 0.000 intron (NM_014141, intron 14 of 22) Tigger6a|DNA|TcMar-Tigger 337808 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr2-8709 chr2 154636763 154636973 + 7.31 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -61713 NM_001260508 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr2-8456 chr2 121600369 121600579 + 7.31 0.000 intron (NM_015282, intron 2 of 38) intron (NM_015282, intron 2 of 38) 48988 NM_001142274 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding chr15-3174 chr15 69201664 69201874 + 7.31 0.000 intron (NM_001324094, intron 2 of 5) intron (NM_001324094, intron 2 of 5) 41134 NM_001324094 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr12-7516 chr12 68849918 68850128 + 7.31 0.000 3' UTR (NM_001278462, exon 6 of 6) 3' UTR (NM_001278462, exon 6 of 6) 40999 NM_001145337 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding chr4-3719 chr4 73350462 73350672 + 7.31 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -53720 NM_000477 213 Hs.418167 NM_000477 ENSG00000163631 ALB HSA|PRO0883|PRO0903|PRO1341 albumin protein-coding chr10-2282 chr10 6580102 6580312 + 7.31 0.000 promoter-TSS (NM_001323266) promoter-TSS (NM_001323266) 69 NM_001323266 5588 Hs.498570 NM_006257 ENSG00000065675 PRKCQ PRKCT|nPKC-theta protein kinase C theta protein-coding chr3-3843 chr3 32442740 32442950 + 7.31 0.000 intron (NM_181472, intron 2 of 3) L1MB8|LINE|L1 50992 NM_181472 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr4-4187 chr4 10842599 10842809 + 7.31 0.000 Intergenic L1ME3|LINE|L1 -157936 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr7-5762 chr7 75588365 75588575 + 7.31 0.000 intron (NM_005338, intron 4 of 30) L1MEd|LINE|L1 -60347 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr6-7683 chr6 85757133 85757343 + 7.31 0.000 Intergenic Intergenic -78505 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr11-7004 chr11 117431114 117431324 + 7.31 0.000 intron (NM_020693, intron 31 of 32) intron (NM_020693, intron 31 of 32) 103365 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr9-8414 chr9 120491419 120491629 + 7.31 0.000 intron (NR_073558, intron 12 of 37) intron (NR_073558, intron 12 of 37) 88643 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr12-8222 chr12 124005975 124006185 + 7.31 0.000 intron (NM_001204298, intron 3 of 4) intron (NM_001204298, intron 3 of 4) 32865 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr2-7132 chr2 190984480 190984690 + 7.31 0.000 intron (NM_007315, intron 15 of 24) intron (NM_007315, intron 15 of 24) 29665 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr4-7779 chr4 95477327 95477537 + 7.31 0.000 intron (NM_003728, intron 1 of 15) MamRep605|LTR?|LTR? 71541 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr9-7703 chr9 72493818 72494028 + 7.31 0.000 Intergenic Intergenic -27878 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr8-7061 chr8 115575460 115575670 + 7.31 0.000 intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 92448 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr7-3582 chr7 24139813 24140023 + 7.31 0.000 Intergenic LTR86A1|LTR|ERVL -144272 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr11-10482 chr11 118072061 118072271 + 7.31 0.000 intron (NM_001354434, intron 1 of 5) intron (NM_001354434, intron 1 of 5) -4846 NR_110734 56649 Hs.161985 NM_019894 ENSG00000137648 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane serine protease 4 protein-coding chr9-5610 chr9 116631173 116631383 + 7.31 0.000 intron (NM_014010, intron 16 of 21) L1MA4|LINE|L1 55937 NM_198186 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr6-6762 chr6 3282703 3282913 + 7.31 0.000 intron (NM_021945, intron 10 of 10) intron (NM_021945, intron 10 of 10) 23861 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr14-3054 chr14 60321259 60321469 + 7.31 0.000 Intergenic Intergenic -1832 NR_146481 101927729 NR_146481 ENSG00000258556 LINC02322 - long intergenic non-protein coding RNA 2322 ncRNA chr12-6550 chr12 117218782 117218992 + 7.31 0.000 intron (NM_001204213, intron 26 of 27) intron (NM_001204213, intron 26 of 27) -28417 NM_015002 23014 Hs.740376 NM_015002 ENSG00000135108 FBXO21 FBX21 F-box protein 21 protein-coding chr2-13370 chr2 136841890 136842100 + 7.31 0.000 intron (NM_001316349, intron 1 of 27) intron (NM_001316349, intron 1 of 27) 76450 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr10-5466 chr10 79286935 79287145 + 7.31 0.000 intron (NM_020338, intron 8 of 24) intron (NM_020338, intron 8 of 24) -60429 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr3-9976 chr3 97994135 97994345 + 7.31 0.000 intron (NM_001105580, intron 8 of 9) intron (NM_001105580, intron 8 of 9) -21789 NM_001261829 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr16-6373 chr16 51979379 51979589 + 7.31 0.000 Intergenic Intergenic 94451 NM_001242473 388276 Hs.534669 NM_001242473 C16orf97 - chromosome 16 open reading frame 97 protein-coding chr15-4585 chr15 59526742 59526952 + 7.31 0.000 Intergenic THE1B|LTR|ERVL-MaLR -84936 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr11-7147 chr11 126868691 126868901 + 7.31 0.000 intron (NM_001301097, intron 1 of 15) MLT1A0|LTR|ERVL-MaLR -71950 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr12-6353 chr12 57572877 57573087 + 7.31 0.000 intron (NM_004984, intron 15 of 28) AluSz|SINE|Alu -18210 NM_001146260 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr8-6702 chr8 84531100 84531310 + 7.31 0.000 intron (NM_001354308, intron 3 of 9) intron (NM_001354308, intron 3 of 9) 115721 NM_001354308 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr13-2942 chr13 36636873 36637083 + 7.31 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -37042 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr12-7094 chr12 44413105 44413315 + 7.31 0.000 Intergenic L1MCb|LINE|L1 462451 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr5-6515 chr5 3230208 3230418 + 7.31 0.000 Intergenic Intergenic 52478 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr8-6619 chr8 76254707 76254917 + 7.31 0.000 Intergenic L1MA4A|LINE|L1 -151842 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr2-4934 chr2 170773612 170773822 + 7.31 0.000 intron (NR_110644, intron 1 of 4) intron (NR_110644, intron 1 of 4) -2951 NR_110185 101926913 Hs.301715 NR_110185 LOC101926913 - uncharacterized LOC101926913 ncRNA chr12-8290 chr12 125980789 125980999 + 7.31 0.000 intron (NR_034132, intron 1 of 5) intron (NR_034132, intron 1 of 5) 2480 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr13-1682 chr13 76825377 76825587 + 7.31 0.000 Intergenic Intergenic 60923 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr3-10034 chr3 103564492 103564702 + 7.31 0.000 Intergenic MER11A|LTR|ERVK -40481 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr22-2545 chr22 26022679 26022889 + 7.31 0.000 intron (NM_001318245, intron 42 of 43) intron (NM_001318245, intron 42 of 43) -146678 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr8-6319 chr8 47261834 47262044 + 7.31 0.000 intron (NM_001352942, intron 1 of 17) intron (NM_001352942, intron 1 of 17) 1001 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr21-1160 chr21 41562777 41562987 + 7.31 0.000 Intergenic Intergenic -54724 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr14-2316 chr14 88189996 88190206 + 7.31 0.000 intron (NM_138317, intron 5 of 6) intron (NM_138317, intron 5 of 6) 80810 NM_138318 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr10-7849 chr10 46215970 46216180 + 7.31 0.000 Intergenic Intergenic 53533 NR_103827 100996567 Hs.546758 NR_103827 ANTXRLP1 - ANTXR like pseudogene 1 pseudo chr1-8625 chr1 201230028 201230238 + 7.31 0.000 Intergenic Intergenic 39308 NM_001164586 91156 Hs.519024 NM_178275 ENSG00000163395 IGFN1 EEF1A2BP1 immunoglobulin like and fibronectin type III domain containing 1 protein-coding chr17-5071 chr17 3897996 3898206 + 7.31 0.000 exon (NM_002558, exon 11 of 12) exon (NM_002558, exon 11 of 12) -5048 NM_032294 84254 Hs.8417 NM_032294 ENSG00000004660 CAMKK1 CAMKKA calcium/calmodulin dependent protein kinase kinase 1 protein-coding chr3-8994 chr3 17839637 17839847 + 7.31 0.000 Intergenic L2b|LINE|L2 96798 NR_135536 105376975 Hs.543238 NR_135536 LOC105376975 - uncharacterized LOC105376975 ncRNA chr2-11191 chr2 157062689 157062899 + 7.31 0.000 Intergenic L1P3|LINE|L1 -194911 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr1-15544 chr1 157695508 157695718 + 7.31 0.000 non-coding (NR_135214, exon 8 of 16) non-coding (NR_135214, exon 8 of 16) 5156 NR_135217 115352 Hs.292449 NM_052939 ENSG00000160856 FCRL3 CD307c|FCRH3|IFGP3|IRTA3|SPAP2 Fc receptor like 3 protein-coding chr4-5657 chr4 10372213 10372423 + 7.31 0.000 Intergenic Intergenic 85108 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr15-2340 chr15 33068883 33069093 + 7.31 0.000 promoter-TSS (NM_001103184) promoter-TSS (NM_001103184) -814 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr13-1552 chr13 30486598 30486808 + 7.31 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) -20726 NM_001363661 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr3-7531 chr3 179501102 179501312 + 7.31 0.000 Intergenic L2|LINE|L2 -49737 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr2-13526 chr2 151510503 151510713 + 7.31 0.000 intron (NM_001271208, intron 162 of 182) MER44A|DNA|TcMar-Tigger 100706 NM_018151 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding chr1-13557 chr1 7383134 7383344 + 7.31 0.000 intron (NR_146199, intron 2 of 2) intron (NR_146199, intron 2 of 2) 6515 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr15-5067 chr15 85726306 85726516 + 7.31 0.000 exon (NM_001270546, exon 19 of 29) exon (NM_001270546, exon 19 of 29) 32314 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr7-6482 chr7 5748064 5748274 + 7.31 0.000 intron (NM_207111, intron 3 of 16) LTR51|LTR|ERV1 33494 NM_207111 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chrX-2296 chrX 53160048 53160258 + 7.31 0.000 Intergenic HERVK3-int|LTR|ERVK 35335 NR_106955 102465539 NR_106955 ENSG00000276575 MIR6895 hsa-mir-6895 microRNA 6895 ncRNA chr20-4370 chr20 56756839 56757049 + 7.31 0.000 Intergenic AluSx1|SINE|Alu 127638 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr5-6726 chr5 73338956 73339166 + 7.31 0.000 TTS (NR_146627) TTS (NR_146627) 1155 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr6-3103 chr6 91815407 91815617 + 7.31 0.000 Intergenic Intergenic -125084 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr15-3421 chr15 89958965 89959175 + 7.31 0.000 Intergenic FAM|SINE|Alu -42254 NM_198526 374655 Hs.459311 NM_198526 ENSG00000140548 ZNF710 - zinc finger protein 710 protein-coding chr2-9598 chr2 241295706 241295916 + 7.31 0.000 intron (NM_005336, intron 1 of 27) MLT1C|LTR|ERVL-MaLR -19376 NM_001349315 4735 Hs.721234 NM_004404 ENSG00000168385 SEPTIN2 DIFF6|NEDD-5|NEDD5|Pnutl3|SEPT2|hNedd5 septin 2 protein-coding chrX-2229 chrX 44227673 44227883 + 7.31 0.000 intron (NM_025184, intron 11 of 14) L2c|LINE|L2 115894 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr10-4808 chr10 9198814 9199024 + 7.31 0.000 non-coding (NR_120635, exon 5 of 5) non-coding (NR_120635, exon 5 of 5) -76694 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr6-5683 chr6 109912247 109912457 + 7.31 0.000 Intergenic LTR71B|LTR|ERV1 -65904 NM_001286099 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr10-5161 chr10 56150563 56150773 + 7.31 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 210591 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr1-11131 chr1 234016833 234017043 + 7.31 0.000 intron (NM_173508, intron 2 of 7) MIRb|SINE|MIR 112262 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr7-3226 chr7 285882 286092 + 7.31 0.000 Intergenic Intergenic 93416 NM_020223 56975 Hs.134742 NM_020223 ENSG00000177706 FAM20C DMP-4|DMP4|G-CK|GEF-CK|RNS FAM20C golgi associated secretory pathway kinase protein-coding chr2-12077 chr2 32735562 32735772 + 7.31 0.000 intron (NM_017735, intron 11 of 19) MIR3|SINE|MIR -89766 NR_027099 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr20-4162 chr20 44398505 44398715 + 7.31 0.000 intron (NM_001287183, intron 2 of 10) intron (NM_001287183, intron 2 of 10) -2629 NM_178850 3172 Hs.116462 NM_000457 ENSG00000101076 HNF4A FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14 hepatocyte nuclear factor 4 alpha protein-coding chr11-5947 chr11 16921876 16922086 + 7.31 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) 4041 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr9-4867 chr9 2933827 2934037 + 7.31 0.000 Intergenic MER52D|LTR|ERV1 -89837 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chr12-5792 chr12 14417808 14418018 + 7.31 0.000 intron (NM_181352, intron 1 of 14) intron (NM_181352, intron 1 of 14) 32632 NM_181352 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr2-5187 chr2 36042528 36042738 + 7.31 0.000 Intergenic Intergenic 312937 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr15-5252 chr15 98558631 98558841 + 7.31 0.000 Intergenic AluJo|SINE|Alu -44400 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding chr19-5411 chr19 15858726 15858936 + 7.31 0.000 intron (NM_001302493, intron 1 of 2) AluSq2|SINE|Alu 6093 NM_001302493 102724279 Hs.164360 NM_001302493 LINC01835 - long intergenic non-protein coding RNA 1835 protein-coding chr16-3843 chr16 66371558 66371768 + 7.31 0.000 intron (NM_001795, intron 1 of 11) intron (NM_001795, intron 1 of 11) 4972 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr2-6894 chr2 96006786 96006996 + 7.31 0.000 Intergenic Intergenic -3660 NR_003698 729234 Hs.720108 NR_003698 ENSG00000231584 FAHD2CP - fumarylacetoacetate hydrolase domain containing 2C, pseudogene pseudo chr12-3899 chr12 122472105 122472315 + 7.31 0.000 3' UTR (NM_017612, exon 14 of 14) 3' UTR (NM_017612, exon 14 of 14) 28722 NM_001350937 55596 Hs.37706 NM_017612 ENSG00000033030 ZCCHC8 - zinc finger CCHC-type containing 8 protein-coding chr19-3212 chr19 53193389 53193599 + 7.31 0.000 promoter-TSS (NM_001353459) promoter-TSS (NM_001353459) -136 NM_024733 79788 Hs.745230 NM_024733 ENSG00000197497 ZNF665 ZFP160L zinc finger protein 665 protein-coding chr14-3636 chr14 71126725 71126935 + 7.31 0.000 Intergenic HERVH-int|LTR|ERV1 -193646 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr1-9910 chr1 72097760 72097970 + 7.31 0.000 intron (NM_173808, intron 1 of 6) MER110-int|LTR|ERV1 184674 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr1-5877 chr1 3284789 3284999 + 7.31 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 156919 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr4-5261 chr4 172316358 172316568 + 7.31 0.000 intron (NM_001034845, intron 4 of 12) intron (NM_001034845, intron 4 of 12) 372454 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr4-1974 chr4 163179176 163179386 + 7.31 0.000 Intergenic Intergenic -12391 NM_138386 92345 Hs.129095 NM_138386 ENSG00000145414 NAF1 - nuclear assembly factor 1 ribonucleoprotein protein-coding chr8-4093 chr8 68488423 68488633 + 7.31 0.000 intron (NR_146187, intron 4 of 13) L2|LINE|L2 -157037 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr13-2520 chr13 60105574 60105784 + 7.31 0.000 intron (NM_001258368, intron 1 of 25) intron (NM_001258368, intron 1 of 25) -39019 NR_046540 100874196 Hs.662188 NR_046540 ENSG00000223815 DIAPH3-AS2 DIPAH3-AS2 DIAPH3 antisense RNA 2 ncRNA chr10-3439 chr10 44399393 44399603 + 7.31 0.000 Intergenic MER125|DNA|DNA -14401 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr12-8291 chr12 126213081 126213291 + 7.31 0.000 Intergenic L2c|LINE|L2 117194 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000284848 LINC02359 - long intergenic non-protein coding RNA 2359 ncRNA chrX-4983 chrX 117274042 117274252 + 7.31 0.000 Intergenic L1PA7|LINE|L1 -456287 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr8-2341 chr8 21773099 21773309 + 7.31 0.000 intron (NM_001165039, intron 1 of 6) intron (NM_001165039, intron 1 of 6) 15671 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr13-660 chr13 52063996 52064206 + 7.31 0.000 TTS (NM_199289) TTS (NM_199289) 39410 NM_021645 9724 Hs.512963 NM_021645 ENSG00000253797 UTP14C 2700066J21Rik|KIAA0266|UTP14B UTP14C small subunit processome component protein-coding chr1-7782 chr1 43634544 43634754 + 7.31 0.000 Intergenic Intergenic -15500 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr1-10042 chr1 89569209 89569419 + 7.31 0.000 intron (NM_015350, intron 6 of 8) L1PA16|LINE|L1 44476 NM_015350 23507 Hs.482017 NM_015350 ENSG00000197147 LRRC8B TA-LRRP|TALRRP leucine rich repeat containing 8 VRAC subunit B protein-coding chrX-3139 chrX 16024370 16024580 + 7.31 0.000 Intergenic Intergenic -99090 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chrX-1522 chrX 23211260 23211470 + 7.31 0.000 intron (NR_073010, intron 2 of 11) LTR16|LTR|ERVL 81781 NR_073010 100873065 Hs.628459 NR_046436 PTCHD1-AS DDX53-AS1|PTCHD1AS1|PTCHD1AS2 PTCHD1 antisense RNA (head to head) ncRNA chr6-3134 chr6 108445154 108445364 + 7.31 0.000 intron (NM_145315, intron 7 of 12) Tigger1|DNA|TcMar-Tigger -114566 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr5-3679 chr5 175796897 175797107 + 7.31 0.000 intron (NM_006650, intron 1 of 4) CpG 469 NM_006650 10814 Hs.193235 NM_006650 ENSG00000145920 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding chr11-8903 chr11 16158048 16158258 + 7.31 0.000 intron (NM_033326, intron 6 of 15) intron (NM_033326, intron 6 of 15) -188532 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr3-5486 chr3 189260889 189261099 + 7.31 0.000 intron (NM_198485, intron 4 of 5) intron (NM_198485, intron 4 of 5) -20400 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr8-1794 chr8 97775529 97775739 + 7.31 0.000 promoter-TSS (NM_018407) promoter-TSS (NM_018407) -154 NM_018407 55353 Hs.492314 NM_018407 ENSG00000104341 LAPTM4B LAPTM4beta|LC27 lysosomal protein transmembrane 4 beta protein-coding chr9-8721 chr9 131814151 131814361 + 7.31 0.000 Intergenic Intergenic -74312 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr18-2478 chr18 47645028 47645238 + 7.31 0.000 Intergenic L1ME3Cz|LINE|L1 264637 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr6-3138 chr6 108800653 108800863 + 7.31 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -47658 NM_001286609 84071 Hs.645481 NM_032131 ENSG00000118690 ARMC2 SPGF38|bA787I22.1 armadillo repeat containing 2 protein-coding chr12-4395 chr12 6029928 6030138 + 7.31 0.000 intron (NM_000552, intron 21 of 51) intron (NM_000552, intron 21 of 51) 10150 NR_145989 109729112 NR_145989 SNORA120 - small nucleolar RNA, H/ACA box 120 snoRNA chr11-6753 chr11 83505300 83505510 + 7.31 0.000 intron (NM_001142699, intron 21 of 27) HERVL-int|LTR|ERVL 177020 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr18-3235 chr18 48106139 48106349 + 7.31 0.000 intron (NM_001371291, intron 4 of 6) intron (NM_001371291, intron 4 of 6) 30904 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr4-3392 chr4 35842889 35843099 + 7.31 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 400945 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr11-7780 chr11 91392004 91392214 + 7.31 0.000 Intergenic L2|LINE|L2 -522907 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr13-3982 chr13 64397575 64397785 + 7.31 0.000 Intergenic Intergenic -321669 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chrX-4295 chrX 43023411 43023621 + 7.31 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -153478 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr10-2676 chr10 99329290 99329500 + 7.31 0.000 promoter-TSS (NM_020348) promoter-TSS (NM_020348) 39 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr7-4605 chr7 22088646 22088856 + 7.31 0.000 Intergenic Intergenic 104994 NM_001367601 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr1-14299 chr1 38771493 38771703 + 7.31 0.000 Intergenic L2c|LINE|L2 88174 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr14-3140 chr14 68585606 68585816 + 7.31 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 43076 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr1-9623 chr1 46187450 46187660 + 7.31 0.000 Intergenic Intergenic 9944 NM_001290130 55624 Hs.525134 NM_017739 ENSG00000085998 POMGNT1 GNTI.2|GnT I.2|LGMD2O|LGMDR15|MEB|MGAT1.2|RP76|gnT-I.2 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) protein-coding chr5-7544 chr5 38417326 38417536 + 7.31 0.000 intron (NM_182798, intron 6 of 16) intron (NM_182798, intron 6 of 16) 13890 NM_182798 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr7-4325 chr7 38751476 38751686 + 7.31 0.000 intron (NM_014396, intron 22 of 28) L2c|LINE|L2 -64492 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chr18-1747 chr18 7367615 7367825 + 7.31 0.000 Intergenic LTR16A|LTR|ERVL 93286 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr18-2729 chr18 72903676 72903886 + 7.31 0.000 Intergenic Intergenic 34741 NR_134647 100505797 Hs.145111 NR_134647 ENSG00000263958 LOC100505797 - myosin heavy chain IB-like ncRNA chr9-5249 chr9 78491504 78491714 + 7.31 0.000 Intergenic Intergenic 194484 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr17-6568 chr17 45111505 45111715 + 7.31 0.000 3' UTR (NM_133373, exon 15 of 15) 3' UTR (NM_133373, exon 15 of 15) 2823 NR_106842 102465470 NR_106842 ENSG00000277249 MIR6784 hsa-mir-6784 microRNA 6784 ncRNA chr6-5793 chr6 7107618 7107828 + 7.31 0.000 promoter-TSS (NM_001003698) promoter-TSS (NM_001003698) -20 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr6-5532 chr6 167824441 167824651 + 7.31 0.000 non-coding (NR_027906, exon 2 of 2) non-coding (NR_027906, exon 2 of 2) -2018 NM_001366320 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding chr1-15762 chr1 174110281 174110491 + 7.31 0.000 Intergenic HAL1|LINE|L1 48901 NR_121197 102724601 Hs.563791 NR_121197 ENSG00000227373 RABGAP1L-DT - RABGAP1L divergent transcript ncRNA chr2-12224 chr2 43376940 43377150 + 7.31 0.000 intron (NM_001083953, intron 29 of 37) intron (NM_001083953, intron 29 of 37) 149834 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr7-4670 chr7 37967541 37967751 + 7.31 0.000 Intergenic L2b|LINE|L2 46327 NM_001242948 54749 Hs.563491 NM_017549 ENSG00000086289 EPDR1 EPDR|MERP-1|MERP1|UCC1 ependymin related 1 protein-coding chr12-8045 chr12 114669782 114669992 + 7.31 0.000 TTS (NM_005996) TTS (NM_005996) 14288 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chrX-2505 chrX 94256084 94256294 + 7.31 0.000 Intergenic L1PA14|LINE|L1 581983 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr2-12356 chr2 51090194 51090404 + 7.31 0.000 intron (NR_135237, intron 2 of 10) LTR33A_|LTR|ERVL 57698 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr14-3649 chr14 76812752 76812962 + 7.31 0.000 promoter-TSS (NM_015305) promoter-TSS (NM_015305) 25 NM_001370748 23357 Hs.497448 NM_015305 ENSG00000013523 ANGEL1 Ccr4e|KIAA0759 angel homolog 1 protein-coding chr5-7161 chr5 3567341 3567551 + 7.31 0.000 Intergenic Intergenic -28386 NM_024337 79192 Hs.424156 NM_024337 ENSG00000170549 IRX1 IRX-5|IRXA1 iroquois homeobox 1 protein-coding chr20-2008 chr20 53193534 53193744 + 7.31 0.000 intron (NM_001193421, intron 1 of 2) intron (NM_001193421, intron 1 of 2) 8356 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr1-7827 chr1 64544130 64544340 + 7.31 0.000 intron (NM_001293274, intron 1 of 25) intron (NM_001293274, intron 1 of 25) -35612 NR_039957 100616338 NR_039957 ENSG00000264470 MIR4794 - microRNA 4794 ncRNA chr9-6756 chr9 20600091 20600301 + 7.31 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) 21742 NM_001286691 4300 Hs.317248 NM_004529 ENSG00000171843 MLLT3 AF9|YEATS3 MLLT3 super elongation complex subunit protein-coding chr12-5091 chr12 94575046 94575256 + 7.31 0.000 intron (NM_001301036, intron 3 of 3) intron (NM_001301036, intron 3 of 3) -3799 NR_106998 102465834 NR_106998 ENSG00000283818 MIR7844 hsa-mir-7844 microRNA 7844 ncRNA chr5-8213 chr5 107968496 107968706 + 7.31 0.000 intron (NM_001163315, intron 7 of 8) intron (NM_001163315, intron 7 of 8) -297664 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr4-3749 chr4 82566296 82566506 + 7.31 0.000 Intergenic Intergenic -4148 NM_001353454 441027 Hs.507676 NM_001080506 ENSG00000249242 TMEM150C TTN3 transmembrane protein 150C protein-coding chr2-13732 chr2 168274106 168274316 + 7.31 0.000 Intergenic L1ME2z|LINE|L1 -26616 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr15-3905 chr15 25940536 25940746 + 7.31 0.000 intron (NR_040082, intron 1 of 4) intron (NR_040082, intron 1 of 4) 38281 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr15-4827 chr15 73550069 73550279 + 7.31 0.000 intron (NM_001042367, intron 3 of 5) intron (NM_001042367, intron 3 of 5) 19369 NR_103844 101241892 Hs.656678 NR_103844 ENSG00000281183 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1 ncRNA chr6-6648 chr6 157679215 157679425 + 7.31 0.000 Intergenic Intergenic -143926 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr9-5148 chr9 37933799 37934009 + 7.31 0.000 intron (NM_003028, intron 5 of 5) L3|LINE|CR1 -29551 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr17-4058 chr17 78231544 78231754 + 7.31 0.000 5' UTR (NM_001204211, exon 2 of 5) 5' UTR (NM_001204211, exon 2 of 5) 339 NM_001204210 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr1-11552 chr1 178645794 178646004 + 7.31 0.000 Intergenic Intergenic -31850 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chrX-2085 chrX 21942112 21942322 + 7.31 0.000 intron (NM_004595, intron 1 of 10) intron (NM_004595, intron 1 of 10) 1508 NM_004595 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr7-6132 chr7 123109733 123109943 + 7.31 0.000 Intergenic L1PA15-16|LINE|L1 90131 NM_022444 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr1-7871 chr1 108489614 108489824 + 7.31 0.000 Intergenic SVA_F|Retroposon|SVA 39437 NM_001143987 653149 Hs.712226 NM_001143987 ENSG00000186086 NBPF6 - NBPF member 6 protein-coding chr10-9064 chr10 124853819 124854029 + 7.31 0.000 Intergenic AluJb|SINE|Alu 52105 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr1-11971 chr1 82610129 82610339 + 7.31 0.000 Intergenic Intergenic -292949 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr11-9880 chr11 74312627 74312837 + 7.31 0.000 intron (NR_120556, intron 3 of 6) L2c|LINE|L2 -1092 NM_001288748 283208 Hs.660541 NM_182904 ENSG00000149380 P4HA3 - prolyl 4-hydroxylase subunit alpha 3 protein-coding chr11-9065 chr11 29810979 29811189 + 7.31 0.000 Intergenic L1MA1|LINE|L1 171309 NR_132652 106456574 Hs.128812 NR_132652 ENSG00000261340 LINC01616 n341006 long intergenic non-protein coding RNA 1616 ncRNA chr2-8471 chr2 124552104 124552314 + 7.31 0.000 intron (NM_130773, intron 10 of 23) intron (NM_130773, intron 10 of 23) 526922 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr3-6563 chr3 122233233 122233443 + 7.31 0.000 intron (NM_001178065, intron 1 of 6) MER96|DNA|hAT-Tip100 49011 NM_001178065 846 Hs.435615 NM_000388 ENSG00000036828 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1|hCasR calcium sensing receptor protein-coding chr20-2048 chr20 5869034 5869244 + 7.31 0.000 Intergenic L2b|LINE|L2 -42371 NM_001819 1114 Hs.516874 NM_001819 ENSG00000089199 CHGB SCG1 chromogranin B protein-coding chr3-10606 chr3 144703861 144704071 + 7.31 0.000 Intergenic LTR37B|LTR|ERV1 730885 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr7-7064 chr7 149386842 149387052 + 7.31 0.000 Intergenic Intergenic 74115 NM_015694 27153 Hs.38512 NM_015694 ENSG00000196453 ZNF777 - zinc finger protein 777 protein-coding chr19-6754 chr19 39298703 39298913 + 7.31 0.000 TTS (NM_172140) TTS (NM_172140) 2401 NM_172140 282618 Hs.406745 NM_172140 ENSG00000182393 IFNL1 IL-29|IL29 interferon lambda 1 protein-coding chr9-7261 chr9 5309277 5309487 + 7.31 0.000 Intergenic L2|LINE|L2 -4666 NM_134441 6019 Hs.127032 NM_005059 ENSG00000107014 RLN2 H2|H2-RLX|RLXH2|bA12D24.1.1|bA12D24.1.2 relaxin 2 protein-coding chr19-2990 chr19 39106020 39106230 + 7.31 0.000 intron (NM_001363687, intron 10 of 10) L1MC4|LINE|L1 -19661 NM_001014835 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr6-4608 chr6 44603415 44603625 + 7.31 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -51639 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr4-6960 chr4 20017220 20017430 + 7.31 0.000 Intergenic Intergenic -234580 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr17-8118 chr17 57700489 57700699 + 7.31 0.000 Intergenic Intergenic 44705 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr22-3666 chr22 22908121 22908331 + 7.31 0.000 Intergenic Intergenic 20410 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr17-6913 chr17 38888710 38888920 + 7.31 0.000 intron (NM_001271608, intron 2 of 5) MIR3|SINE|MIR 18757 NM_006148 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr2-14205 chr2 208415170 208415380 + 7.31 0.000 intron (NM_005048, intron 1 of 12) L1MC3|LINE|L1 8445 NM_005048 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr2-8821 chr2 170180241 170180451 + 7.31 0.000 intron (NM_001083615, intron 1 of 33) intron (NM_001083615, intron 1 of 33) 2199 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr11-10238 chr11 100608001 100608211 + 7.31 0.000 Intergenic L1PA11|LINE|L1 -79182 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr14-3746 chr14 38567925 38568135 + 7.31 0.000 Intergenic Intergenic -311937 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr6-7508 chr6 64294054 64294264 + 7.31 0.000 intron (NM_001292009, intron 30 of 43) intron (NM_001292009, intron 30 of 43) 487323 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr6-5431 chr6 157555332 157555542 + 7.31 0.000 intron (NM_024630, intron 2 of 8) intron (NM_024630, intron 2 of 8) 26305 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr15-4804 chr15 72605527 72605737 + 7.31 0.000 Intergenic Intergenic 18415 NR_030359 693215 NR_030359 ENSG00000283798 MIR630 MIRN630|hsa-mir-630 microRNA 630 ncRNA chr18-2149 chr18 57252993 57253203 + 7.31 0.000 Intergenic Intergenic -81904 NR_149129 105372138 Hs.574448 NR_149129 ENSG00000267726 LINC02565 - long intergenic non-protein coding RNA 2565 ncRNA chr8-4024 chr8 58940583 58940793 + 7.31 0.000 intron (NM_014729, intron 2 of 8) intron (NM_014729, intron 2 of 8) 178459 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr15-4306 chr15 39238267 39238477 + 7.31 0.000 Intergenic Intergenic -12297 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr22-2422 chr22 19029198 19029408 + 7.31 0.000 intron (NR_110533, intron 5 of 5) CpG 6679 NR_026651 26222 Hs.681383 NR_026651 DGCR10 DGS-B DiGeorge syndrome critical region gene 10 ncRNA chr2-5450 chr2 122748541 122748751 + 7.31 0.000 Intergenic Intergenic 324835 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr17-2474 chr17 60727682 60727892 + 7.31 0.000 intron (NM_001330413, intron 5 of 25) L1MC1|LINE|L1 49936 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr7-4588 chr7 13731957 13732167 + 7.31 0.000 Intergenic Intergenic 254452 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr9-3323 chr9 93003886 93004096 + 7.31 0.000 intron (NM_001369952, intron 4 of 16) intron (NM_001369952, intron 4 of 16) 10953 NR_121565 101927954 Hs.673794 NR_121565 LOC101927954 - uncharacterized LOC101927954 ncRNA chr19-6964 chr19 47799369 47799579 + 7.31 0.000 Intergenic AluJb|SINE|Alu 4130 NM_198479 284355 Hs.629812 NM_198479 ENSG00000178928 TPRX1 TPRX tetrapeptide repeat homeobox 1 protein-coding chr9-5716 chr9 125522693 125522903 + 7.31 0.000 intron (NM_001006618, intron 7 of 7) intron (NM_001006618, intron 7 of 7) 184410 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr3-10280 chr3 124953593 124953803 + 7.31 0.000 Intergenic Intergenic -18947 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr7-8195 chr7 31498647 31498857 + 7.31 0.000 Intergenic Intergenic -15319 NM_001257967 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr18-3104 chr18 36063147 36063357 + 7.31 0.000 intron (NM_001303411, intron 1 of 7) AluJb|SINE|Alu 4307 NM_001303412 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr4-3890 chr4 144577477 144577687 + 7.31 0.000 Intergenic MSTC|LTR|ERVL-MaLR 68437 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA chr20-3316 chr20 17155491 17155701 + 7.31 0.000 Intergenic Intergenic -70511 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr4-2823 chr4 41256742 41256952 + 7.31 0.000 promoter-TSS (NM_004181) promoter-TSS (NM_004181) -81 NM_004181 7345 Hs.518731 NM_004181 ENSG00000154277 UCHL1 HEL-117|HEL-S-53|NDGOA|PARK5|PGP 9.5|PGP9.5|PGP95|SPG79|Uch-L1 ubiquitin C-terminal hydrolase L1 protein-coding chr2-6180 chr2 1858207 1858417 + 7.31 0.000 intron (NM_015025, intron 18 of 24) intron (NM_015025, intron 18 of 24) -113797 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-4943 chr2 174065367 174065577 + 7.31 0.000 Intergenic L1MC|LINE|L1 40192 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr12-7573 chr12 75782416 75782626 + 7.31 0.000 Intergenic L1MB2|LINE|L1 249255 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr1-12785 chr1 79776930 79777140 + 7.31 0.000 Intergenic Intergenic -758720 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr14-4563 chr14 45952077 45952287 + 7.31 0.000 Intergenic Intergenic -111977 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA chr19-2613 chr19 2693383 2693593 + 7.31 0.000 intron (NM_052847, intron 1 of 4) intron (NM_052847, intron 1 of 4) 9206 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr7-6276 chr7 136678518 136678728 + 7.31 0.000 Intergenic L1PBa|LINE|L1 -190029 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr4-6564 chr4 184712266 184712476 + 7.31 0.000 intron (NR_104593, intron 7 of 11) L1ME2z|LINE|L1 21725 NM_024629 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr13-4106 chr13 79307967 79308177 + 7.31 0.000 Intergenic LTR18B|LTR|ERVL 98149 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr11-9094 chr11 31834513 31834723 + 7.31 0.000 intron (NR_033971, intron 1 of 2) intron (NR_033971, intron 1 of 2) 8051 NR_117094 103157000 NR_117094 ENSG00000281880 PAUPAR - PAX6 upstream antisense RNA ncRNA chr9-7725 chr9 73801332 73801542 + 7.31 0.000 Intergenic L1MA9|LINE|L1 -570094 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr3-5742 chr3 19925568 19925778 + 7.31 0.000 intron (NM_001330688, intron 3 of 14) intron (NM_001330688, intron 3 of 14) 8544 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding chr7-5846 chr7 88034419 88034629 + 7.31 0.000 intron (NM_001324421, intron 3 of 28) L1MA3|LINE|L1 100273 NM_001324421 53616 Hs.256398 NM_004194 ENSG00000008277 ADAM22 ADAM 22|EIEE61|MDC2 ADAM metallopeptidase domain 22 protein-coding chr8-7255 chr8 129085519 129085729 + 7.31 0.000 Intergenic Intergenic -119623 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA chr1-11993 chr1 91871923 91872133 + 7.31 0.000 intron (NM_001195684, intron 2 of 17) intron (NM_001195684, intron 2 of 17) 14123 NR_036634 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr14-2776 chr14 20213133 20213343 + 7.31 0.000 Intergenic SVA_D|Retroposon|SVA -10472 NM_001004480 122748 Hs.553575 NM_001004480 ENSG00000176219 OR11H6 - olfactory receptor family 11 subfamily H member 6 protein-coding chr11-10026 chr11 82005260 82005470 + 7.31 0.000 intron (NR_120571, intron 6 of 7) intron (NR_120571, intron 6 of 7) -114529 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr22-1909 chr22 45911633 45911843 + 7.31 0.000 Intergenic Intergenic 65424 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr10-7284 chr10 130408212 130408422 + 7.31 0.000 Intergenic Intergenic 271908 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr20-4230 chr20 48095587 48095797 + 7.31 0.000 Intergenic L1MB3|LINE|L1 -105575 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA chrX-1688 chrX 8909195 8909405 + 7.31 0.000 Intergenic Intergenic -107917 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr6-5271 chr6 137983306 137983516 + 7.31 0.000 Intergenic L2a|LINE|L2 -37611 NR_149097 105378020 Hs.520420 NR_149097 ENSG00000226004 LINC02528 - long intergenic non-protein coding RNA 2528 ncRNA chr2-11908 chr2 24365135 24365345 + 7.31 0.000 Intergenic Intergenic -4704 NM_001348184 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr7-6984 chr7 108015104 108015314 + 7.31 0.000 Intergenic Intergenic -12048 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr19-2823 chr19 53158307 53158517 + 7.31 0.000 intron (NM_001172675, intron 1 of 4) CpG 641 NM_001172675 84671 Hs.467239 NM_032584 ENSG00000197937 ZNF347 ZNF1111 zinc finger protein 347 protein-coding chr21-536 chr21 41684554 41684764 + 7.31 0.000 intron (NR_024367, intron 1 of 2) intron (NR_024367, intron 1 of 2) 5357 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr17-5612 chr17 48649510 48649720 + 7.31 0.000 Intergenic L1ME3|LINE|L1 -17056 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr2-7599 chr2 25928423 25928633 + 7.31 0.000 3' UTR (NM_002254, exon 8 of 8) 3' UTR (NM_002254, exon 8 of 8) -50041 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr22-2825 chr22 43337279 43337489 + 7.31 0.000 intron (NM_173050, intron 2 of 21) intron (NM_173050, intron 2 of 21) 5988 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr1-8239 chr1 30313711 30313921 + 7.31 0.000 Intergenic Intergenic -276204 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr2-3226 chr2 230821962 230822172 + 7.31 0.000 TTS (NM_001130849) TTS (NM_001130849) -42118 NM_001287241 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr21-724 chr21 36248110 36248320 + 7.31 0.000 intron (NM_005128, intron 20 of 36) intron (NM_005128, intron 20 of 36) -71974 NM_001320446 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr11-9767 chr11 69373185 69373395 + 7.31 0.000 Intergenic L2a|LINE|L2 -52365 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr6-2652 chr6 170065583 170065793 + 7.31 0.000 Intergenic Intergenic -94954 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr15-2723 chr15 95277750 95277960 + 7.31 0.000 Intergenic Intergenic 49245 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr1-12594 chr1 33866385 33866595 + 7.31 0.000 intron (NM_052896, intron 5 of 69) intron (NM_052896, intron 5 of 69) 2411 NM_001352984 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding chr4-2433 chr4 145407187 145407397 + 7.31 0.000 Intergenic Intergenic -66873 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr12-2447 chr12 52723160 52723370 + 7.31 0.000 Intergenic Intergenic -19741 NM_175078 374454 Hs.334989 NM_175078 ENSG00000189182 KRT77 K1B|KRT1B keratin 77 protein-coding chr17-4189 chr17 16450806 16451016 + 7.31 0.000 intron (NM_001113567, intron 2 of 3) intron (NM_001113567, intron 2 of 3) 9685 NR_003054 692106 NR_003054 ENSG00000277512 SNORD65 HBII-135|SNORD65A small nucleolar RNA, C/D box 65 snoRNA chr6-5422 chr6 156857818 156858028 + 7.31 0.000 intron (NM_017519, intron 2 of 18) Tigger3c|DNA|TcMar-Tigger -78192 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr1-6406 chr1 11466805 11467015 + 7.31 0.000 Intergenic Intergenic -12245 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr11-4726 chr11 72510582 72510792 + 7.31 0.000 Intergenic L1PA13|LINE|L1 -59969 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr2-13761 chr2 170710819 170711029 + 7.31 0.000 intron (NR_110185, intron 5 of 5) intron (NR_110185, intron 5 of 5) 3643 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr6-5228 chr6 135129097 135129307 + 7.31 0.000 Intergenic Intergenic -52106 NR_134958 4602 Hs.606320 NM_005375 ENSG00000118513 MYB Cmyb|c-myb|c-myb_CDS|efg MYB proto-oncogene, transcription factor protein-coding chr1-9989 chr1 83464064 83464274 + 7.31 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger 18115 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chrX-4030 chrX 17519416 17519626 + 7.31 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -8914 NR_135631 101928389 Hs.686933 NR_135631 ENSG00000235834 LOC101928389 - uncharacterized LOC101928389 ncRNA chr8-4732 chr8 142146340 142146550 + 7.31 0.000 Intergenic Intergenic -29894 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr2-10245 chr2 114325429 114325639 + 7.31 0.000 Intergenic L1ME3B|LINE|L1 -117107 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr12-7368 chr12 56746649 56746859 + 7.31 0.000 intron (NM_000946, intron 4 of 12) intron (NM_000946, intron 4 of 12) 5569 NM_000946 5557 Hs.534339 NM_000946 ENSG00000198056 PRIM1 p49 DNA primase subunit 1 protein-coding chr5-6272 chr5 102511688 102511898 + 7.31 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -12792 NM_001308014 133482 Hs.388874 NM_173488 ENSG00000205359 SLCO6A1 CT48|GST|OATP-I|OATP6A1|OATPY solute carrier organic anion transporter family member 6A1 protein-coding chr4-2731 chr4 6425574 6425784 + 7.31 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) -4561 NM_001206996 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr10-3358 chr10 15223015 15223225 + 7.31 0.000 intron (NM_001010924, intron 5 of 7) AluJr|SINE|Alu -54427 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr1-13079 chr1 180654651 180654861 + 7.31 0.000 intron (NR_137330, intron 1 of 12) L1MB3|LINE|L1 22734 NR_137330 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding chr12-8223 chr12 124037381 124037591 + 7.31 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 64271 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr11-5941 chr11 16389160 16389370 + 7.31 0.000 intron (NM_001367872, intron 3 of 16) AluJo|SINE|Alu 13598 NM_001145819 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr14-2166 chr14 91291356 91291566 + 7.31 0.000 intron (NM_001080414, intron 23 of 29) intron (NM_001080414, intron 23 of 29) -37581 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr1-6911 chr1 148424256 148424466 + 7.31 0.000 intron (NR_111930, intron 4 of 8) intron (NR_111930, intron 4 of 8) 21646 NR_104081 101954272 NR_104081 ENSG00000201183 RNVU1-3 RNU1-113|RNU1-151|RNVU1-12|vU1.12|vU1.3 RNA, variant U1 small nuclear 3 snRNA chr4-6722 chr4 4146544 4146754 + 7.31 0.000 Intergenic Intergenic 80245 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr20-3289 chr20 9053395 9053605 + 7.31 0.000 Intergenic Intergenic -15554 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr17-8091 chr17 55551047 55551257 + 7.31 0.000 Intergenic Intergenic -129317 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr20-2682 chr20 46060192 46060402 + 7.31 0.000 TTS (NM_001348151) TTS (NM_001348151) 29665 NM_001348151 57727 Hs.654991 NM_020967 ENSG00000124160 NCOA5 CIA|bA465L10.6 nuclear receptor coactivator 5 protein-coding chr7-4725 chr7 52593841 52594051 + 7.31 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -441687 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr18-3316 chr18 55651393 55651603 + 7.31 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -15541 NM_001243226 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr2-10547 chr2 237097079 237097289 + 7.31 0.000 intron (NM_198189, intron 8 of 8) intron (NM_198189, intron 8 of 8) 11295 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr13-3685 chr13 35714390 35714600 + 7.31 0.000 Intergenic LTR88c|LTR|Gypsy? 16768 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr6-5389 chr6 152454698 152454908 + 7.31 0.000 intron (NM_182961, intron 24 of 145) MamSINE1|SINE|tRNA-RTE 74273 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chrX-3376 chrX 150553960 150554170 + 7.31 0.000 Intergenic L2b|LINE|L2 -14532 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr1-12098 chr1 156772392 156772602 + 7.31 0.000 intron (NM_005973, intron 1 of 6) Tigger19a|DNA|TcMar-Tigger 4962 NM_005973 5546 Hs.516948 NM_005973 ENSG00000143294 PRCC RCCP1|TPRC proline rich mitotic checkpoint control factor protein-coding chr16-5915 chr16 2950347 2950557 + 7.31 0.000 3' UTR (NM_001308068, exon 10 of 10) 3' UTR (NM_001308068, exon 10 of 10) -13823 NM_024507 79412 Hs.661128 NM_024507 ENSG00000131650 KREMEN2 KRM2 kringle containing transmembrane protein 2 protein-coding chr2-8984 chr2 191250770 191250980 + 7.31 0.000 intron (NM_012223, intron 1 of 28) intron (NM_012223, intron 1 of 28) 5471 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr6-3433 chr6 130853785 130853995 + 7.31 0.000 intron (NM_001350320, intron 15 of 15) intron (NM_001350320, intron 15 of 15) 26485 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr10-8730 chr10 103379139 103379349 + 7.31 0.000 intron (NM_139052, intron 3 of 9) MLT1J|LTR|ERVL-MaLR 11268 NM_006951 6877 Hs.96103 NM_006951 ENSG00000148835 TAF5 TAF(II)100|TAF2D|TAFII-100|TAFII100 TATA-box binding protein associated factor 5 protein-coding chrX-2120 chrX 27820654 27820864 + 7.31 0.000 intron (NM_182506, intron 2 of 2) intron (NM_182506, intron 2 of 2) 12769 NM_182506 139422 Hs.447363 NM_182506 ENSG00000177689 MAGEB10 - MAGE family member B10 protein-coding chr8-5158 chr8 86033337 86033547 + 7.31 0.000 Intergenic Intergenic 36226 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr18-3184 chr18 44895913 44896123 + 7.31 0.000 intron (NM_015559, intron 3 of 5) intron (NM_015559, intron 3 of 5) 74148 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr11-9143 chr11 34098975 34099185 + 7.31 0.000 TTS (NM_203364) TTS (NM_203364) -6549 NM_024662 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr19-6066 chr19 2708322 2708532 + 7.31 0.000 Intergenic L1MD1|LINE|L1 -5733 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr2-13335 chr2 133507883 133508093 + 7.31 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 60475 NM_207363 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr4-5230 chr4 168803668 168803878 + 7.31 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -28322 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr22-3446 chr22 41252862 41253072 + 7.31 0.000 promoter-TSS (NR_106949) promoter-TSS (NR_106949) 83 NR_106949 102466758 NR_106949 ENSG00000274552 MIR6889 hsa-mir-6889 microRNA 6889 ncRNA chr8-2890 chr8 142497696 142497906 + 7.31 0.000 intron (NM_001702, intron 17 of 30) intron (NM_001702, intron 17 of 30) 48152 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr10-5379 chr10 74103548 74103758 + 7.31 0.000 intron (NM_014000, intron 14 of 21) intron (NM_014000, intron 14 of 21) 47175 NR_135191 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr21-1772 chr21 36743727 36743937 + 7.31 0.000 intron (NM_009586, intron 9 of 9) intron (NM_009586, intron 9 of 9) 44717 NM_005069 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 SIM bHLH transcription factor 2 protein-coding chr3-8101 chr3 15579690 15579900 + 7.31 0.000 intron (NM_001284413, intron 8 of 15) intron (NM_001284413, intron 8 of 15) -21557 NM_001281723 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr5-7874 chr5 73280185 73280395 + 7.31 0.000 Intergenic Intergenic -57616 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr22-3395 chr22 35320461 35320671 + 7.31 0.000 intron (NR_156428, intron 2 of 13) L2b|LINE|L2 -15074 NR_037471 100500826 NR_037471 ENSG00000266320 MIR3909 mir-3909 microRNA 3909 ncRNA chr1-7684 chr1 20868451 20868661 + 7.31 0.000 intron (NM_003760, intron 15 of 31) MLT1A|LTR|ERVL-MaLR -81868 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr14-4003 chr14 37622447 37622657 + 7.31 0.000 exon (NM_001310135, exon 3 of 33) exon (NM_001310135, exon 3 of 33) 26923 NM_001310135 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr5-6645 chr5 51085511 51085721 + 7.31 0.000 Intergenic L1PB4|LINE|L1 -115429 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chr1-8055 chr1 897198 897408 + 7.31 0.000 Intergenic HERVK9-int|LTR|ERVK -20501 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr10-6924 chr10 50516333 50516543 + 7.31 0.000 intron (NM_147156, intron 3 of 10) intron (NM_147156, intron 3 of 10) 107518 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr10-8321 chr10 78782155 78782365 + 7.31 0.000 Intergenic MER113|DNA|hAT-Charlie 285188 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr9-4830 chr9 137269381 137269591 + 7.31 0.000 intron (NM_015456, intron 10 of 12) Tigger3a|DNA|TcMar-Tigger -8240 NM_017723 54863 Hs.495541 NM_017723 ENSG00000198113 TOR4A C9orf167 torsin family 4 member A protein-coding chr8-5136 chr8 72219832 72220042 + 7.31 0.000 intron (NR_033867, intron 12 of 19) intron (NR_033867, intron 12 of 19) 31697 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo chr19-5063 chr19 50500381 50500591 + 7.31 0.000 Intergenic (TCCCCC)n|Simple_repeat|Simple_repeat 10705 NM_138334 126119 Hs.467151 NM_138334 ENSG00000161677 JOSD2 SBBI54 Josephin domain containing 2 protein-coding chr19-4768 chr19 31019876 31020086 + 7.31 0.000 Intergenic Intergenic -147529 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr7-5334 chr7 28182227 28182437 + 7.31 0.000 intron (NR_034097, intron 1 of 3) intron (NR_034097, intron 1 of 3) -1537 NM_175061 221895 Hs.368944 NM_175061 ENSG00000153814 JAZF1 TIP27|ZNF802 JAZF zinc finger 1 protein-coding chr1-13335 chr1 245049877 245050087 + 7.31 0.000 intron (NM_032328, intron 3 of 7) MIRb|SINE|MIR -79113 NR_111907 101928068 Hs.134857 NR_111907 LOC101928068 - uncharacterized LOC101928068 ncRNA chr12-3419 chr12 108939042 108939252 + 7.31 0.000 intron (NM_018711, intron 8 of 15) MIR|SINE|MIR 59055 NM_001917 1610 Hs.113227 NM_001917 ENSG00000110887 DAO DAAO|DAMOX|OXDA D-amino acid oxidase protein-coding chr1-10073 chr1 93596264 93596474 + 7.31 0.000 intron (NR_034091, intron 2 of 3) L3b|LINE|CR1 4401 NR_034091 100129046 Hs.729244 NR_034091 LOC100129046 - uncharacterized LOC100129046 ncRNA chr3-6875 chr3 152400791 152401001 + 7.31 0.000 intron (NM_001314057, intron 3 of 11) intron (NM_001314057, intron 3 of 11) -59906 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr1-9136 chr1 18779610 18779820 + 7.31 0.000 Intergenic Intergenic 79946 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr14-4002 chr14 37130656 37130866 + 7.31 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -41265 NR_033240 100129794 Hs.601579 NR_033240 ENSG00000258708 SLC25A21-AS1 - SLC25A21 antisense RNA 1 ncRNA chr5-7550 chr5 38765743 38765953 + 7.31 0.000 intron (NR_109951, intron 2 of 3) intron (NR_109951, intron 2 of 3) -45575 NR_104631 101926904 Hs.634191 NR_104631 ENSG00000249740 LINC01265 - long intergenic non-protein coding RNA 1265 ncRNA chr18-2308 chr18 79820817 79821027 + 7.31 0.000 Intergenic AluJo|SINE|Alu -42746 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr8-4540 chr8 123767699 123767909 + 7.31 0.000 promoter-TSS (NM_001317917) promoter-TSS (NM_001317917) -635 NM_001317917 157769 Hs.459174 NM_144963 ENSG00000176853 FAM91A1 - family with sequence similarity 91 member A1 protein-coding chr11-5273 chr11 35040242 35040452 + 7.31 0.000 Intergenic Intergenic 97685 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr11-9618 chr11 66008632 66008842 + 7.31 0.000 Intergenic Intergenic -3271 NM_001323 1474 Hs.139389 NM_001323 ENSG00000175315 CST6 - cystatin E/M protein-coding chr6-7335 chr6 45986828 45987038 + 7.31 0.000 intron (NM_001370649, intron 1 of 5) intron (NM_001370649, intron 1 of 5) 28927 NM_016929 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr9-5585 chr9 113833836 113834046 + 7.31 0.000 Intergenic L1MB7|LINE|L1 -42341 NM_001318040 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr2-12296 chr2 46727437 46727647 + 7.31 0.000 intron (NM_144949, intron 1 of 1) L1MEf|LINE|L1 28247 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr17-6768 chr17 2198411 2198621 + 7.31 0.000 intron (NM_001256827, intron 3 of 11) L1MD2|LINE|L1 -34162 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr3-8303 chr3 61289961 61290171 + 7.31 0.000 Intergenic MIR|SINE|MIR -38605 NR_148921 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr17-7751 chr17 34540067 34540277 + 7.31 0.000 Intergenic AluSc|SINE|Alu 39197 NR_160787 400591 Hs.514090 NM_207454 C17orf102 - chromosome 17 open reading frame 102 ncRNA chr4-4859 chr4 112803164 112803374 + 7.31 0.000 intron (NM_001354269, intron 1 of 43) MLT1D|LTR|ERVL-MaLR -14728 NM_001354253 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr8-6091 chr8 27127907 27128117 + 7.31 0.000 Intergenic MER90a|LTR|ERV1 -79049 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA chr18-2218 chr18 66361530 66361740 + 7.31 0.000 Intergenic L1MDa|LINE|L1 242455 NM_001271028 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr3-2978 chr3 79173510 79173720 + 7.31 0.000 intron (NM_002941, intron 2 of 30) LTR12C|LTR|ERV1 -154156 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chrX-2397 chrX 72395648 72395858 + 7.31 0.000 intron (NR_051952, intron 8 of 9) intron (NR_051952, intron 8 of 9) -88596 NM_001144886 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr2-5413 chr2 112187975 112188185 + 7.31 0.000 3' UTR (NM_153214, exon 8 of 8) 3' UTR (NM_153214, exon 8 of 8) 49695 NM_153214 129804 Hs.437696 NM_153214 ENSG00000144152 FBLN7 TM14 fibulin 7 protein-coding chr1-6231 chr1 221891824 221892034 + 7.31 0.000 Intergenic Intergenic -51263 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr1-7425 chr1 42777836 42778046 + 7.31 0.000 non-coding (NR_040733, exon 4 of 4) non-coding (NR_040733, exon 4 of 4) 6954 NR_133055 105378683 Hs.656494 NR_133055 LOC105378683 - uncharacterized LOC105378683 ncRNA chrX-2850 chrX 140145177 140145387 + 7.31 0.000 Intergenic LTR18B|LTR|ERVL 53615 NM_001271560 389895 Hs.127679 NM_001271560 LOC389895 - chromosome 16 open reading frame 72-like protein-coding chr8-4474 chr8 117294074 117294284 + 7.31 0.000 Intergenic L2c|LINE|L2 159184 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr10-5788 chr10 105124758 105124968 + 7.31 0.000 intron (NM_014978, intron 7 of 26) intron (NM_014978, intron 7 of 26) -458647 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr4-3816 chr4 116640869 116641079 + 7.31 0.000 Intergenic Intergenic 341249 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr2-7710 chr2 33166356 33166566 + 7.31 0.000 intron (NM_206943, intron 5 of 33) intron (NM_206943, intron 5 of 33) 31864 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr3-10962 chr3 176988413 176988623 + 7.31 0.000 Intergenic Intergenic -171517 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr1-9966 chr1 80256249 80256459 + 7.31 0.000 Intergenic Intergenic -279401 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr11-8477 chr11 118170177 118170387 + 7.31 0.000 intron (NM_004588, intron 1 of 3) L2a|LINE|L2 6357 NM_004588 6327 Hs.129783 NM_004588 ENSG00000149575 SCN2B ATFB14 sodium voltage-gated channel beta subunit 2 protein-coding chr3-5060 chr3 41881903 41882113 + 7.31 0.000 intron (NR_136342, intron 16 of 34) intron (NR_136342, intron 16 of 34) 80095 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr9-3127 chr9 87464339 87464549 + 7.31 0.000 Intergenic Intergenic -32784 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr9-6461 chr9 87625012 87625222 + 7.31 0.000 intron (NM_004938, intron 3 of 25) MER58B|DNA|hAT-Charlie 71663 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chrX-3404 chrX 8184543 8184753 + 7.31 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -13381 NM_016378 51480 Hs.279737 NM_016378 ENSG00000177504 VCX2 VCX-2r|VCX2R|VCXB variable charge X-linked 2 protein-coding chr21-1804 chr21 39057652 39057862 + 7.31 0.000 Intergenic Intergenic -79983 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr2-12929 chr2 101531320 101531530 + 7.31 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -56313 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr9-5555 chr9 110228632 110228842 + 7.31 0.000 Intergenic Charlie17b|DNA|hAT-Charlie -20604 NM_001012993 401546 Hs.125608 NM_001012993 ENSG00000188959 C9orf152 bA470J20.2 chromosome 9 open reading frame 152 protein-coding chr9-8287 chr9 113232979 113233189 + 7.31 0.000 intron (NM_001859, intron 1 of 4) intron (NM_001859, intron 1 of 4) 11540 NM_001859 1317 Hs.532315 NM_001859 ENSG00000136868 SLC31A1 COPT1|CTR1 solute carrier family 31 member 1 protein-coding chr5-6075 chr5 9855106 9855316 + 7.31 0.000 intron (NR_147004, intron 1 of 1) MER54B|LTR|ERVL 834 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA KI270730.1-12 KI270730.1 106494 106704 + 7.31 0.000 NA NA NA NA chr3-9044 chr3 23518945 23519155 + 7.31 0.000 intron (NM_001370225, intron 4 of 5) intron (NM_001370225, intron 4 of 5) -286905 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chrX-5197 chrX 134315851 134316061 + 7.31 0.000 Intergenic L1MA8|LINE|L1 -57356 NM_001015877 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr1-6226 chr1 219871424 219871634 + 7.31 0.000 Intergenic AluJb|SINE|Alu 57122 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr14-3462 chr14 101130546 101130756 + 7.31 0.000 Intergenic Intergenic 9795 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr10-8901 chr10 114404442 114404652 + 7.31 0.000 promoter-TSS (NM_001001936) promoter-TSS (NM_001001936) -45 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr5-8959 chr5 160332305 160332515 + 7.31 0.000 intron (NR_131769, intron 1 of 7) L2a|LINE|L2 7182 NR_131769 79616 Hs.14070 NM_024565 ENSG00000135083 CCNJL - cyclin J like protein-coding chr12-3768 chr12 51924772 51924982 + 7.31 0.000 Intergenic Intergenic 12494 NM_001077401 94 Hs.591026 NM_000020 ENSG00000139567 ACVRL1 ACVRLK1|ALK-1|ALK1|HHT|HHT2|ORW2|SKR3|TSR-I activin A receptor like type 1 protein-coding chr2-6768 chr2 44298440 44298650 + 7.31 0.000 intron (NM_000341, intron 4 of 9) AluSz6|SINE|Alu 23065 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding chrX-4082 chrX 22878233 22878443 + 7.31 0.000 intron (NR_073010, intron 3 of 11) L1M6|LINE|L1 -121622 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr5-7700 chr5 56927681 56927891 + 7.31 0.000 non-coding (NR_136555, exon 5 of 5) non-coding (NR_136555, exon 5 of 5) 17724 NM_001323018 133383 Hs.85950 NM_153706 ENSG00000155542 SETD9 C5orf35 SET domain containing 9 protein-coding chr13-4132 chr13 82627347 82627557 + 7.31 0.000 Intergenic Intergenic 1254941 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr1-10157 chr1 109711934 109712144 + 7.31 0.000 promoter-TSS (NM_000851) promoter-TSS (NM_000851) -212 NM_000851 2949 Hs.75652 NM_000851 ENSG00000134201 GSTM5 GSTM5-5|GTM5 glutathione S-transferase mu 5 protein-coding chr11-6993 chr11 116958320 116958530 + 7.31 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) -120475 NM_000039 335 Hs.93194 NM_000039 ENSG00000118137 APOA1 apo(a) apolipoprotein A1 protein-coding chr10-7926 chr10 51378218 51378428 + 7.31 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 78750 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr10-3693 chr10 105064676 105064886 + 7.31 0.000 intron (NM_014978, intron 5 of 26) MLT2B3|LTR|ERVL -398565 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr11-9269 chr11 44403769 44403979 + 7.31 0.000 Intergenic MIRb|SINE|MIR -93735 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr1-9341 chr1 28594866 28595076 + 7.31 0.000 3' UTR (NM_001193532, exon 2 of 2) 3' UTR (NM_001193532, exon 2 of 2) 2476 NM_001193532 115273 Hs.652321 NM_152304 ENSG00000188060 RAB42 - RAB42, member RAS oncogene family protein-coding chr6-8488 chr6 157255288 157255498 + 7.31 0.000 Intergenic Intergenic 68866 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr1-10743 chr1 198342748 198342958 + 7.31 0.000 Intergenic Intergenic 185855 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr3-10655 chr3 149273176 149273386 + 7.31 0.000 Intergenic Intergenic -51452 NR_046371 1356 Hs.558314 NM_000096 ENSG00000047457 CP CP-2 ceruloplasmin protein-coding chr3-8869 chr3 10311963 10312173 + 7.31 0.000 exon (NM_183352, exon 5 of 9) exon (NM_183352, exon 5 of 9) 8973 NM_001136232 6396 Hs.166924 NM_030673 ENSG00000157020 SEC13 D3S1231E|SEC13L1|SEC13R|npp-20 SEC13 homolog, nuclear pore and COPII coat complex component protein-coding chr19-6811 chr19 41905185 41905395 + 7.31 0.000 intron (NM_198977, intron 23 of 27) intron (NM_198977, intron 23 of 27) 20847 NM_199002 9138 Hs.631550 NM_004706 ENSG00000076928 ARHGEF1 GEF1|IMD62|LBCL2|LSC|P115-RHOGEF|SUB1.5 Rho guanine nucleotide exchange factor 1 protein-coding chr21-1826 chr21 40387220 40387430 + 7.31 0.000 intron (NR_073202, intron 3 of 32) intron (NR_073202, intron 3 of 32) 4241 NR_038899 100506492 Hs.667053 NR_038896 ENSG00000235123 DSCAM-AS1 M41 DSCAM antisense RNA 1 ncRNA chr3-11191 chr3 193361416 193361626 + 7.31 0.000 intron (NM_198505, intron 5 of 29) intron (NM_198505, intron 5 of 29) 17232 NM_198505 344905 Hs.658032 NM_198505 ENSG00000187527 ATP13A5 - ATPase 13A5 protein-coding chr3-9836 chr3 77624585 77624795 + 7.31 0.000 intron (NM_001290039, intron 24 of 26) intron (NM_001290039, intron 24 of 26) 424273 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr22-4160 chr22 45077839 45078049 + 7.31 0.000 Intergenic MIR1_Amn|SINE|MIR -67939 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr5-4622 chr5 32810762 32810972 + 7.31 0.000 Intergenic Intergenic 99546 NM_001204375 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chrX-1470 chrX 118164411 118164621 + 7.31 0.000 Intergenic L1PA7|LINE|L1 -47176 NM_001168301 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr20-844 chr20 36092648 36092858 + 7.31 0.000 promoter-TSS (NM_001258329) promoter-TSS (NM_001258329) 43 NM_001258329 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr5-7637 chr5 51364099 51364309 + 7.31 0.000 Intergenic AluJb|SINE|Alu 19128 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA chr4-3747 chr4 81844583 81844793 + 7.31 0.000 Intergenic Intergenic -372781 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr1-14100 chr1 30696930 30697140 + 7.31 0.000 Intergenic Intergenic -21737 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr4-4218 chr4 15809342 15809552 + 7.31 0.000 intron (NR_132660, intron 1 of 6) MER5B|DNA|hAT-Charlie 31119 NM_001775 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr11-6837 chr11 95736099 95736309 + 7.31 0.000 Intergenic Intergenic 53578 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr17-6307 chr17 50731796 50732006 + 7.31 0.000 intron (NM_006107, intron 1 of 10) LTR47A|LTR|ERVL 12298 NM_016424 51747 Hs.130293 NM_006107 ENSG00000108848 LUC7L3 CRA|CREAP-1|CROP|LUC7A|OA48-18|hLuc7A LUC7 like 3 pre-mRNA splicing factor protein-coding chr13-3298 chr13 49357895 49358105 + 7.31 0.000 intron (NM_001079670, intron 6 of 10) intron (NM_001079670, intron 6 of 10) 43542 NM_030925 81617 Hs.87159 NM_030925 ENSG00000102547 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39 like protein-coding chr4-6546 chr4 177682261 177682471 + 7.31 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -46391 NR_028342 285501 Hs.722466 NM_001085490 ENSG00000231171 LINC01098 - long intergenic non-protein coding RNA 1098 ncRNA chr4-4360 chr4 39270133 39270343 + 7.31 0.000 intron (NM_025132, intron 31 of 36) L1ME4b|LINE|L1 87709 NM_001317924 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr11-4850 chr11 26083657 26083867 + 7.31 0.000 Intergenic L1PA8|LINE|L1 -105361 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr2-6105 chr2 200786741 200786951 + 7.31 0.000 intron (NR_135012, intron 29 of 30) intron (NR_135012, intron 29 of 30) -24700 NM_014670 9689 Hs.355983 NM_014670 ENSG00000082153 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding chr8-3585 chr8 136050071 136050281 + 7.31 0.000 Intergenic L2a|LINE|L2 -480622 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr22-3391 chr22 33261324 33261534 + 7.31 0.000 Intergenic L2b|LINE|L2 152900 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA chr7-6892 chr7 70386928 70387138 + 7.31 0.000 intron (NM_015570, intron 4 of 18) L2a|LINE|L2 -745111 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr8-6919 chr8 102607439 102607649 + 7.31 0.000 Intergenic Intergenic 46420 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr11-2566 chr11 107589338 107589548 + 7.31 0.000 Intergenic L2c|LINE|L2 -1648 NM_001130037 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr6-6972 chr6 18307902 18308112 + 7.31 0.000 Intergenic AluSc|SINE|Alu -43477 NM_001134709 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr12-5045 chr12 88471730 88471940 + 7.31 0.000 Intergenic Intergenic 108636 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr4-8119 chr4 126626071 126626281 + 7.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR -1006781 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr21-1442 chr21 28252998 28253208 + 7.31 0.000 Intergenic Intergenic -24436 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr2-8996 chr2 194002108 194002318 + 7.31 0.000 Intergenic LTR12C|LTR|ERV1 -342056 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr9-4072 chr9 123280268 123280478 + 7.31 0.000 Intergenic L1MC5a|LINE|L1 -11787 NM_018387 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr8-6056 chr8 25045375 25045585 + 7.31 0.000 Intergenic L2b|LINE|L2 -88611 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr15-4844 chr15 74045018 74045228 + 7.31 0.000 3' UTR (NM_033238, exon 9 of 9) 3' UTR (NM_033238, exon 9 of 9) 37427 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr2-7638 chr2 27452675 27452885 + 7.31 0.000 intron (NM_015662, intron 35 of 47) Tigger3a|DNA|TcMar-Tigger 10399 NM_173853 200634 Hs.59509 NM_173853 ENSG00000157992 KRTCAP3 KCP3 keratinocyte associated protein 3 protein-coding chr3-4576 chr3 177711558 177711768 + 7.31 0.000 intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -105202 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr6-7657 chr6 83671790 83672000 + 7.31 0.000 intron (NM_001242792, intron 2 of 28) intron (NM_001242792, intron 2 of 28) 36664 NM_001363677 9892 Hs.368046 NM_014841 ENSG00000065609 SNAP91 AP180|CALM synaptosome associated protein 91 protein-coding chr2-5443 chr2 121289305 121289515 + 7.31 0.000 Intergenic LTR16|LTR|ERVL -4208 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr21-1871 chr21 42659286 42659496 + 7.31 0.000 intron (NM_001001575, intron 1 of 14) intron (NM_001001575, intron 1 of 14) 5639 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr19-6114 chr19 3777650 3777860 + 7.31 0.000 TTS (NM_002378) TTS (NM_002378) -5527 NM_001319074 84839 Hs.532691 NM_032753 ENSG00000173976 RAX2 ARMD6|CORD11|QRX|RAXL1 retina and anterior neural fold homeobox 2 protein-coding chr13-3690 chr13 36450240 36450450 + 7.31 0.000 Intergenic Intergenic 17850 NM_003914 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr10-5522 chr10 84669747 84669957 + 7.31 0.000 Intergenic L1PA14|LINE|L1 244683 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr6-7776 chr6 96796626 96796836 + 7.31 0.000 3' UTR (NM_001143957, exon 3 of 3) 3' UTR (NM_001143957, exon 3 of 3) 40746 NM_001143957 81491 Hs.221364 NM_030784 ENSG00000112218 GPR63 PSP24(beta)|PSP24B G protein-coupled receptor 63 protein-coding chr5-5899 chr5 34752479 34752689 + 7.31 0.000 intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 65025 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr7-6334 chr7 145511345 145511555 + 7.31 0.000 Intergenic LTR41C|LTR|ERVL -675397 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr11-10256 chr11 101775699 101775909 + 7.31 0.000 Intergenic LTR16E1|LTR|ERVL -139206 NM_001363543 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr15-3601 chr15 61227585 61227795 + 7.31 0.000 intron (NM_134261, intron 1 of 10) CpG 1612 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr19-6782 chr19 41109598 41109808 + 7.31 0.000 Intergenic AluSz|SINE|Alu -4729 NM_000774 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr9-8505 chr9 124885527 124885737 + 7.31 0.000 intron (NM_002077, intron 19 of 22) L2a|LINE|L2 23502 NM_030978 81873 Hs.132499 NM_030978 ENSG00000136950 ARPC5L ARC16-2 actin related protein 2/3 complex subunit 5 like protein-coding chr1-14795 chr1 71190241 71190451 + 7.31 0.000 intron (NR_046217, intron 2 of 3) intron (NR_046217, intron 2 of 3) 109022 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr19-4645 chr19 15925834 15926044 + 7.31 0.000 intron (NM_021187, intron 4 of 11) AluY|SINE|Alu 8927 NM_001128932 57834 Hs.187393 NM_021187 ENSG00000171903 CYP4F11 CYPIVF11 cytochrome P450 family 4 subfamily F member 11 protein-coding chrX-4167 chrX 32219846 32220056 + 7.31 0.000 intron (NM_000109, intron 43 of 78) intron (NM_000109, intron 43 of 78) -64482 NM_004023 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr8-5648 chr8 109462773 109462983 + 7.31 0.000 intron (NM_177531, intron 48 of 77) L2a|LINE|L2 -76822 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding chr16-4946 chr16 749144 749354 + 7.31 0.000 Intergenic Ricksha_0|DNA|MULE-MuDR -8252 NM_022493 64428 Hs.513247 NM_022493 ENSG00000103245 CIAO3 HPRN|IOP1|LET1L|NAR1|NARFL|PRN cytosolic iron-sulfur assembly component 3 protein-coding chr9-2861 chr9 129060227 129060437 + 7.31 0.000 intron (NR_138423, intron 7 of 16) MIRb|SINE|MIR -20779 NM_001135917 57171 Hs.21701 NM_020438 ENSG00000167130 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding chr1-12067 chr1 145598785 145598995 + 7.31 0.000 intron (NR_104217, intron 2 of 19) LTR104_Mam|LTR|Gypsy 8968 NR_104217 101929780 Hs.534675 NR_104217 ENSG00000272150 NBPF25P WI2-925H4.1 NBPF member 25, pseudogene pseudo chr4-8438 chr4 154050208 154050418 + 7.31 0.000 Intergenic Intergenic -261230 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr2-13076 chr2 110944862 110945072 + 7.31 0.000 intron (NM_001142807, intron 12 of 17) L1PA15|LINE|L1 170621 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr4-7272 chr4 48478587 48478797 + 7.31 0.000 Intergenic MER44B|DNA|TcMar-Tigger -4651 NM_152679 201780 Hs.132591 NM_152679 ENSG00000145248 SLC10A4 P4 solute carrier family 10 member 4 protein-coding chr11-9283 chr11 44904692 44904902 + 7.31 0.000 intron (NM_130783, intron 3 of 9) intron (NM_130783, intron 3 of 9) 45363 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr4-8273 chr4 141333501 141333711 + 7.31 0.000 promoter-TSS (NR_121625) promoter-TSS (NR_121625) -989 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr11-4121 chr11 37851582 37851792 + 7.31 0.000 Intergenic Intergenic -86914 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr3-6632 chr3 127336769 127336979 + 7.31 0.000 intron (NR_110147, intron 3 of 4) intron (NR_110147, intron 3 of 4) -48828 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr4-7376 chr4 60798394 60798604 + 7.31 0.000 Intergenic Intergenic -124120 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr6-6822 chr6 6987167 6987377 + 7.31 0.000 Intergenic Intergenic -120471 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr12-4802 chr12 55632466 55632676 + 7.31 0.000 Intergenic Intergenic -4321 NM_206899 121130 Hs.554551 NM_206899 ENSG00000175398 OR10P1 OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701 olfactory receptor family 10 subfamily P member 1 protein-coding chr10-5489 chr10 80356281 80356491 + 7.31 0.000 promoter-TSS (NM_001270041) promoter-TSS (NM_001270041) 369 NM_001370155 143241 Hs.407751 NM_138812 ENSG00000170788 DYDC1 DPY30D1 DPY30 domain containing 1 protein-coding chr3-8594 chr3 159844828 159845038 + 7.31 0.000 intron (NM_001197109, intron 1 of 6) intron (NM_001197109, intron 1 of 6) 5072 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr13-2567 chr13 67164711 67164921 + 7.31 0.000 intron (NM_001318372, intron 2 of 4) L2a|LINE|L2 65520 NM_001318372 5101 Hs.654709 NM_020403 ENSG00000184226 PCDH9 - protocadherin 9 protein-coding chr2-6843 chr2 70342843 70343053 + 7.31 0.000 Intergenic Intergenic -40881 NM_001329753 84908 Hs.516077 NM_032822 ENSG00000035141 FAM136A - family with sequence similarity 136 member A protein-coding chrX-4246 chrX 39243280 39243490 + 7.31 0.000 Intergenic Intergenic 83977 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr20-3798 chr20 22849559 22849769 + 7.31 0.000 Intergenic L1MCb|LINE|L1 -164320 NR_146528 105372566 Hs.555065 NR_146527 LINC01747 - long intergenic non-protein coding RNA 1747 ncRNA chr19-6262 chr19 7547314 7547524 + 7.31 0.000 intron (NM_001166111, intron 15 of 33) L1M4|LINE|L1 11702 NM_001166114 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chr4-5736 chr4 54066871 54067081 + 7.31 0.000 Intergenic Intergenic -2371 NM_012110 26511 Hs.335393 NM_012110 ENSG00000109220 CHIC2 BTL cysteine rich hydrophobic domain 2 protein-coding chrX-1155 chrX 42928577 42928787 + 7.31 0.000 Intergenic L2a|LINE|L2 -150519 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr8-4029 chr8 59580997 59581207 + 7.31 0.000 Intergenic Intergenic 461892 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr2-13645 chr2 160420230 160420440 + 7.31 0.000 intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) -12453 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr4-5262 chr4 172478684 172478894 + 7.31 0.000 intron (NM_001034845, intron 5 of 12) L1PB4|LINE|L1 210128 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr17-5178 chr17 11666203 11666413 + 7.31 0.000 intron (NM_001372, intron 15 of 68) intron (NM_001372, intron 15 of 68) 67838 NM_001372 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr6-2214 chr6 42726577 42726787 + 7.31 0.000 promoter-TSS (NR_037141) promoter-TSS (NR_037141) -894 NR_037141 442211 Hs.563394 NR_037141 ATP6V0CP3 - ATPase H+ transporting V0 subunit c pseudogene 3 pseudo chr9-6345 chr9 13591562 13591772 + 7.31 0.000 Intergenic Intergenic -160338 NR_033863 401492 Hs.632651 NR_033863 ENSG00000270547 LINC01235 - long intergenic non-protein coding RNA 1235 ncRNA chr2-11728 chr2 10549726 10549936 + 7.31 0.000 Intergenic Intergenic 100103 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr12-5106 chr12 96280964 96281174 + 7.31 0.000 intron (NM_002595, intron 15 of 16) intron (NM_002595, intron 15 of 16) 25571 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr6-3985 chr6 111889399 111889609 + 7.31 0.000 Intergenic Intergenic -16052 NM_002037 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr10-8208 chr10 72631003 72631213 + 7.31 0.000 Intergenic AluJb|SINE|Alu -4917 NM_006077 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr9-8015 chr9 94554949 94555159 + 7.31 0.000 promoter-TSS (NR_121566) promoter-TSS (NR_121566) 9 NR_121566 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr2-14661 chr2 236073501 236073711 + 7.31 0.000 intron (NM_001037131, intron 16 of 17) intron (NM_001037131, intron 16 of 17) 94780 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr5-5181 chr5 111432975 111433185 + 7.31 0.000 intron (NM_001744, intron 5 of 10) L2c|LINE|L2 -79146 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr12-5632 chr12 64566075 64566285 + 7.31 0.000 Intergenic AluSx1|SINE|Alu -44315 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr11-9939 chr11 76257223 76257433 + 7.31 0.000 Intergenic Intergenic -50826 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr16-4803 chr16 86046038 86046248 + 7.31 0.000 Intergenic Intergenic 127796 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr17-5383 chr17 31792089 31792299 + 7.31 0.000 Intergenic L2c|LINE|L2 66768 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr6-5790 chr6 5828342 5828552 + 7.31 0.000 Intergenic Intergenic -133175 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr6-5505 chr6 164836117 164836327 + 7.31 0.000 Intergenic MER65A|LTR|ERV1 -14159 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr12-6043 chr12 111660973 111661183 + 7.31 0.000 intron (NM_006768, intron 6 of 11) AluSc|SINE|Alu 24878 NM_006768 8315 Hs.530940 NM_006768 ENSG00000089234 BRAP BRAP2|IMP|RNF52 BRCA1 associated protein protein-coding chr3-5577 chr3 6309844 6310054 + 7.31 0.000 Intergenic L1PA16|LINE|L1 495500 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr9-2783 chr9 113398408 113398618 + 7.31 0.000 intron (NM_001003945, intron 1 of 11) intron (NM_001003945, intron 1 of 11) 2607 NM_001317745 210 Hs.1227 NM_000031 ENSG00000148218 ALAD ALADH|PBGS aminolevulinate dehydratase protein-coding chr7-6534 chr7 44147925 44148135 + 7.31 0.000 intron (NM_033507, intron 6 of 9) intron (NM_033507, intron 6 of 9) -1397 NM_001354801 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr13-4058 chr13 75647159 75647369 + 7.31 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 10934 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr10-7794 chr10 36534074 36534284 + 7.31 0.000 Intergenic Intergenic -591678 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr8-2296 chr8 125410633 125410843 + 7.31 0.000 Intergenic Intergenic -19620 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chrX-4470 chrX 57944508 57944718 + 7.31 0.000 Intergenic L1PREC2|LINE|L1 -33980 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr2-8620 chr2 143658360 143658570 + 7.31 0.000 intron (NM_018460, intron 12 of 13) L3|LINE|CR1 -278602 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr1-11675 chr1 2968593 2968803 + 7.31 0.000 Intergenic CpG -52769 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr3-2689 chr3 52144370 52144580 + 7.31 0.000 intron (NM_015426, intron 6 of 10) intron (NM_015426, intron 6 of 10) 9948 NM_001161580 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr14-3503 chr14 102983121 102983331 + 7.31 0.000 intron (NM_006035, intron 7 of 36) intron (NM_006035, intron 7 of 36) 60570 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr16-5488 chr16 8582211 8582421 + 7.31 0.000 intron (NM_001290097, intron 2 of 3) intron (NM_001290097, intron 2 of 3) 7522 NM_001290095 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr4-7669 chr4 86973451 86973661 + 7.31 0.000 intron (NM_001166693, intron 2 of 20) intron (NM_001166693, intron 2 of 20) -33432 NM_001313960 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr10-7365 chr10 1766274 1766484 + 7.31 0.000 Intergenic Intergenic -28854 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr3-10004 chr3 100570408 100570618 + 7.31 0.000 intron (NM_001363876, intron 6 of 6) intron (NM_001363876, intron 6 of 6) -39088 NM_032787 84873 Hs.334511 NM_032787 ENSG00000144820 ADGRG7 GPR128 adhesion G protein-coupled receptor G7 protein-coding chr16-4249 chr16 21087032 21087242 + 7.31 0.000 intron (NM_001347886, intron 18 of 61) intron (NM_001347886, intron 18 of 61) 63709 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr11-5981 chr11 19326604 19326814 + 7.31 0.000 Intergenic Intergenic -24015 NM_001111018 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr1-7617 chr1 2085385 2085595 + 7.31 0.000 intron (NM_001242874, intron 1 of 14) intron (NM_001242874, intron 1 of 14) 11504 NM_001350805 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr4-7780 chr4 95518991 95519201 + 7.31 0.000 intron (NM_003728, intron 1 of 15) intron (NM_003728, intron 1 of 15) 29877 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr19-2197 chr19 19213027 19213237 + 7.31 0.000 intron (NM_004386, intron 1 of 14) intron (NM_004386, intron 1 of 14) 1174 NM_004386 1463 Hs.169047 NM_004386 ENSG00000130287 NCAN CSPG3 neurocan protein-coding chr12-6935 chr12 25829304 25829514 + 7.31 0.000 Intergenic Intergenic 44670 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr16-3799 chr16 35913575 35913785 + 7.31 0.000 Intergenic SST1|Satellite|centr 167128 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA chr13-4455 chr13 112806677 112806887 + 7.31 0.000 intron (NM_032189, intron 4 of 28) L1MB7|LINE|L1 -52051 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr12-5216 chr12 106633091 106633301 + 7.31 0.000 intron (NM_001206691, intron 2 of 17) intron (NM_001206691, intron 2 of 17) 32048 NM_001206691 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr2-7342 chr2 634977 635187 + 7.31 0.000 Intergenic Intergenic 41622 NM_001352681 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr4-3398 chr4 41358852 41359062 + 7.31 0.000 promoter-TSS (NM_001289124) promoter-TSS (NM_001289124) -650 NM_001289124 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr19-6079 chr19 3131783 3131993 + 7.31 0.000 Intergenic AluY|SINE|Alu -4145 NM_002068 2769 Hs.73797 NM_002068 ENSG00000060558 GNA15 GNA16 G protein subunit alpha 15 protein-coding chr6-8174 chr6 132610866 132611076 + 7.31 0.000 Intergenic Intergenic -1669 NR_028511 9288 Hs.730091 NR_028511 ENSG00000179073 TAAR3P GPR57|GPR58|TAAR2|TAAR3 trace amine associated receptor 3, pseudogene pseudo chr3-9383 chr3 47426064 47426274 + 7.31 0.000 exon (NM_012235, exon 7 of 23) exon (NM_012235, exon 7 of 23) 45148 NM_001304482 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr6-7162 chr6 37323264 37323474 + 7.31 0.000 intron (NR_130108, intron 12 of 12) AluJr|SINE|Alu -30614 NM_003958 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr4-4477 chr4 56227855 56228065 + 7.31 0.000 intron (NM_020722, intron 2 of 10) intron (NM_020722, intron 2 of 10) 57765 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr1-15904 chr1 184302548 184302758 + 7.31 0.000 Intergenic Intergenic -84376 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr1-13405 chr1 1974313 1974523 + 7.31 0.000 intron (NM_001304360, intron 6 of 38) intron (NM_001304360, intron 6 of 38) 29368 NM_001304360 85452 Hs.232092 NM_001003808 ENSG00000142609 CFAP74 C1orf222|KIAA1751 cilia and flagella associated protein 74 protein-coding chrX-4935 chrX 110805515 110805725 + 7.31 0.000 Intergenic Intergenic -9803 NM_001367209 91851 Hs.496587 NM_145234 ENSG00000101938 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin like 1 protein-coding chr4-4302 chr4 27714468 27714678 + 7.31 0.000 Intergenic THE1B|LTR|ERVL-MaLR 497094 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr20-4453 chr20 62226505 62226715 + 7.31 0.000 Intergenic AluJr|SINE|Alu -1633 NR_160555 105369209 Hs.711994 NR_160555 LOC105369209 - uncharacterized LOC105369209 ncRNA chr4-7296 chr4 53321232 53321442 + 7.31 0.000 intron (NM_152540, intron 2 of 8) intron (NM_152540, intron 2 of 8) 44724 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr6-5359 chr6 149572719 149572929 + 7.31 0.000 intron (NM_138785, intron 3 of 7) AluSz6|SINE|Alu 6449 NM_138785 116254 Hs.438872 NM_138785 ENSG00000055211 GINM1 C6orf72 glycoprotein integral membrane 1 protein-coding chr16-6846 chr16 82317547 82317757 + 7.31 0.000 Intergenic Intergenic -147428 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr17-5543 chr17 44043280 44043490 + 7.31 0.000 intron (NM_001369486, intron 1 of 3) intron (NM_001369486, intron 1 of 3) -20234 NM_001304813 84336 Hs.514211 NM_032376 ENSG00000091947 TMEM101 - transmembrane protein 101 protein-coding chr14-4442 chr14 33152139 33152349 + 7.31 0.000 intron (NM_001164749, intron 2 of 11) intron (NM_001164749, intron 2 of 11) 213365 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr10-7093 chr10 93557360 93557570 + 7.31 0.000 Intergenic Intergenic -9200 NM_001195755 338557 Hs.661022 NM_181745 ENSG00000186188 FFAR4 BMIQ10|GPR120|GPR129|GT01|O3FAR1|PGR4 free fatty acid receptor 4 protein-coding chr16-5718 chr16 82774572 82774782 + 7.31 0.000 intron (NR_110938, intron 1 of 2) intron (NR_110938, intron 1 of 2) 1358 NR_110938 101928446 Hs.684007 NR_110938 ENSG00000260862 LOC101928446 - uncharacterized LOC101928446 ncRNA chr7-4903 chr7 128811508 128811718 + 7.31 0.000 intron (NM_001367764, intron 13 of 17) intron (NM_001367764, intron 13 of 17) -18793 NM_001127487 2318 Hs.58414 NM_001458 ENSG00000128591 FLNC ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5 filamin C protein-coding chr1-14605 chr1 54496806 54497016 + 7.31 0.000 Intergenic Intergenic -51317 NM_015547 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr8-6814 chr8 96969504 96969714 + 7.31 0.000 intron (NM_016134, intron 5 of 7) L2c|LINE|L2 308319 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr17-4202 chr17 28399305 28399515 + 7.31 0.000 3' UTR (NM_080669, exon 5 of 5) 3' UTR (NM_080669, exon 5 of 5) 6802 NM_001242366 113235 Hs.446689 NM_080669 ENSG00000076351 SLC46A1 G21|HCP1|PCFT solute carrier family 46 member 1 protein-coding chr6-5591 chr6 36514774 36514984 + 7.31 0.000 intron (NM_007271, intron 7 of 13) intron (NM_007271, intron 7 of 13) 32600 NM_001305102 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr7-2524 chr7 46932868 46933078 + 7.31 0.000 Intergenic Intergenic -235851 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr2-12649 chr2 74075789 74075999 + 7.31 0.000 intron (NM_001287491, intron 5 of 11) intron (NM_001287491, intron 5 of 11) 72018 NM_001035505 388962 Hs.61472 NM_212552 ENSG00000163170 BOLA3 MMDS2 bolA family member 3 protein-coding chr17-7579 chr17 20757985 20758195 + 7.31 0.000 Intergenic AluSx4|SINE|Alu 45644 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr9-3283 chr9 40921962 40922172 + 7.31 0.000 Intergenic L1PA4|LINE|L1 7025 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr7-8147 chr7 28760781 28760991 + 7.31 0.000 intron (NM_001011666, intron 3 of 6) intron (NM_001011666, intron 3 of 6) 74753 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr4-4429 chr4 51945556 51945766 + 7.31 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 74702 NM_001024611 339977 Hs.661450 NM_001024611 ENSG00000188993 LRRC66 - leucine rich repeat containing 66 protein-coding chr11-7185 chr11 130507431 130507641 + 7.31 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 58562 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr12-6674 chr12 3033333 3033543 + 7.31 0.000 intron (NM_201443, intron 8 of 10) intron (NM_201443, intron 8 of 10) -43917 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr20-3636 chr20 8860398 8860608 + 7.31 0.000 intron (NM_182734, intron 32 of 32) intron (NM_182734, intron 32 of 32) 29318 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr10-5675 chr10 99030746 99030956 + 7.31 0.000 intron (NM_021828, intron 3 of 11) L1MA1|LINE|L1 -106283 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr19-6628 chr19 31277067 31277277 + 7.31 0.000 exon (NM_020856, exon 2 of 2) exon (NM_020856, exon 2 of 2) 72264 NR_138036 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr1-16195 chr1 207466666 207466876 + 7.31 0.000 exon (NM_001877, exon 2 of 19) exon (NM_001877, exon 2 of 19) 12443 NM_001877 1380 Hs.445757 NM_001877 ENSG00000117322 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement C3d receptor 2 protein-coding chr5-5273 chr5 122464241 122464451 + 7.31 0.000 TTS (NM_001242935) TTS (NM_001242935) 14741 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA chr11-5205 chr11 12860786 12860996 + 7.31 0.000 intron (NM_021961, intron 3 of 12) L2c|LINE|L2 128657 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr2-5019 chr2 231088037 231088247 + 7.31 0.000 intron (NM_001191037, intron 16 of 23) MIR|SINE|MIR 31275 NM_002807 5707 Hs.3887 NM_002807 ENSG00000173692 PSMD1 P112|Rpn2|S1 proteasome 26S subunit, non-ATPase 1 protein-coding chr3-4595 chr3 191342128 191342338 + 7.31 0.000 intron (NM_178335, intron 1 of 11) intron (NM_178335, intron 1 of 11) -11697 NM_198152 257313 Hs.518492 NM_198152 ENSG00000188958 UTS2B U2B|URP|UTS2D urotensin 2B protein-coding chr14-3168 chr14 69754122 69754332 + 7.31 0.000 Intergenic Intergenic -12915 NM_001039465 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr18-1915 chr18 33523239 33523449 + 7.31 0.000 Intergenic LTR82B|LTR|ERVL -54875 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr16-1713 chr16 23803623 23803833 + 7.31 0.000 Intergenic Intergenic -32255 NM_212535 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr4-5224 chr4 168096668 168096878 + 7.31 0.000 intron (NM_007193, intron 1 of 11) MIR|SINE|MIR 4236 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr7-5655 chr7 55923168 55923378 + 7.31 0.000 exon (NM_001366796, exon 5 of 7) exon (NM_001366796, exon 5 of 7) -28604 NM_015969 51373 Hs.44298 NM_015969 ENSG00000239789 MRPS17 HSPC011|MRP-S17|RPMS17|S17mt mitochondrial ribosomal protein S17 protein-coding chr4-3905 chr4 148091688 148091898 + 7.31 0.000 intron (NM_000901, intron 8 of 8) intron (NM_000901, intron 8 of 8) 309198 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr7-8079 chr7 24939062 24939272 + 7.31 0.000 intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) 41011 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr12-6479 chr12 101860060 101860270 + 7.31 0.000 Intergenic Intergenic -17415 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr11-6855 chr11 99199244 99199454 + 7.31 0.000 intron (NM_001243270, intron 1 of 23) intron (NM_001243270, intron 1 of 23) 178400 NM_001243270 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr7-7000 chr7 120314286 120314496 + 7.31 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 41216 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr20-3509 chr20 63184157 63184367 + 7.31 0.000 Intergenic Intergenic 5762 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA chr2-14369 chr2 219106546 219106756 + 7.31 0.000 intron (NM_024782, intron 5 of 7) intron (NM_024782, intron 5 of 7) -45730 NM_002181 3549 Hs.654504 NM_002181 ENSG00000163501 IHH BDA1|HHG2 Indian hedgehog signaling molecule protein-coding chr20-2294 chr20 5044499 5044709 + 7.31 0.000 Intergenic AluSq2|SINE|Alu -34291 NM_203327 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr1-10109 chr1 99458555 99458765 + 7.31 0.000 Intergenic L1MCb|LINE|L1 29144 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr15-4968 chr15 79036818 79037028 + 7.31 0.000 intron (NM_001145648, intron 5 of 26) intron (NM_001145648, intron 5 of 26) -31263 NM_153815 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr6-3801 chr6 27177068 27177278 + 7.31 0.000 Intergenic A-rich|Low_complexity|Low_complexity 29547 NR_036096 100422934 NR_036096 ENSG00000265565 MIR3143 mir-3143 microRNA 3143 ncRNA chr4-5868 chr4 123037735 123037945 + 7.31 0.000 intron (NM_001345856, intron 11 of 15) intron (NM_001345856, intron 11 of 15) 114762 NM_001317799 166378 Hs.709648 NM_145207 ENSG00000145375 SPATA5 AFG2|EHLMRS|SPAF spermatogenesis associated 5 protein-coding chr2-12198 chr2 41847193 41847403 + 7.31 0.000 Intergenic Intergenic -30257 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr2-11060 chr2 114442876 114443086 + 7.31 0.000 intron (NM_001321910, intron 1 of 26) intron (NM_001321910, intron 1 of 26) 340 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr2-8485 chr2 126944507 126944717 + 7.31 0.000 Intergenic MER39|LTR|ERV1 45722 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr6-4684 chr6 53985328 53985538 + 7.31 0.000 intron (NR_125842, intron 2 of 3) intron (NR_125842, intron 2 of 3) -13457 NR_046832 100874282 Hs.571169 NR_046832 ENSG00000236996 MLIP-IT1 - MLIP intronic transcript 1 ncRNA chr1-5950 chr1 27510791 27511001 + 7.31 0.000 Intergenic L2c|LINE|L2 -20729 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr5-1313 chr5 74614835 74615045 + 7.31 0.000 Intergenic AluSx|SINE|Alu -25083 NM_001292004 3074 Hs.69293 NM_000521 ENSG00000049860 HEXB ENC-1AS|HEL-248|HEL-S-111 hexosaminidase subunit beta protein-coding chr14-5111 chr14 88948432 88948642 + 7.31 0.000 Intergenic Intergenic 123886 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr2-12851 chr2 96454693 96454903 + 7.31 0.000 Intergenic L1PA8|LINE|L1 50559 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr10-6929 chr10 51960577 51960787 + 7.31 0.000 intron (NM_001098512, intron 5 of 17) intron (NM_001098512, intron 5 of 17) -261087 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr1-12928 chr1 119008519 119008729 + 7.31 0.000 Intergenic CpG -7219 NR_135035 105378933 Hs.599652 NR_135034 ENSG00000226172 LOC105378933 - uncharacterized LOC105378933 ncRNA chr8-5313 chr8 144042464 144042674 + 7.31 0.000 intron (NM_198572, intron 4 of 4) AluSp|SINE|Alu -6829 NR_158554 392275 NR_158554 SMPD5 MA-nSMase sphingomyelin phosphodiesterase 5 pseudo chr7-6028 chr7 108016762 108016972 + 7.31 0.000 Intergenic Intergenic -13706 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr14-3050 chr14 59691409 59691619 + 7.31 0.000 intron (NM_021136, intron 3 of 8) L1PA15-16|LINE|L1 -44494 NR_049851 100847088 NR_049851 ENSG00000263629 MIR5586 - microRNA 5586 ncRNA chr17-4709 chr17 30869754 30869964 + 7.31 0.000 intron (NM_024857, intron 14 of 22) L1MC5a|LINE|L1 36379 NM_024683 79736 Hs.317340 NM_024683 ENSG00000172171 TEFM C17orf42 transcription elongation factor, mitochondrial protein-coding chr6-8432 chr6 152283369 152283579 + 7.31 0.000 intron (NM_182961, intron 96 of 145) intron (NM_182961, intron 96 of 145) -97056 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr3-9582 chr3 55571494 55571704 + 7.31 0.000 intron (NM_015576, intron 16 of 16) MER74A|LTR|ERVL -83957 NM_003392 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr16-2145 chr16 31033566 31033776 + 7.31 0.000 5' UTR (NM_001272095, exon 1 of 10) 5' UTR (NM_001272095, exon 1 of 10) 113 NM_004604 6810 Hs.83734 NM_004604 ENSG00000103496 STX4 STX4A|p35-2 syntaxin 4 protein-coding chr7-8293 chr7 39530162 39530372 + 7.31 0.000 Intergenic Intergenic -36137 NM_001282446 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr10-7667 chr10 27879873 27880083 + 7.31 0.000 intron (NM_001290021, intron 10 of 13) CR1-3_Croc|LINE|CR1 101893 NM_001290021 55130 Hs.127530 NM_018076 ENSG00000169126 ARMC4 CILD23 armadillo repeat containing 4 protein-coding chr20-2240 chr20 430732 430942 + 7.31 0.000 non-coding (NR_136659, exon 12 of 12) non-coding (NR_136659, exon 12 of 12) 22538 NR_136659 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr7-3430 chr7 155378006 155378216 + 7.31 0.000 Intergenic CpG -3965 NR_147174 100286906 Hs.568111 NR_147174 LOC100286906 - uncharacterized LOC100286906 ncRNA chr2-8551 chr2 133748031 133748241 + 7.31 0.000 Intergenic L2c|LINE|L2 -179673 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr11-7076 chr11 121325638 121325848 + 7.31 0.000 Intergenic L2a|LINE|L2 32875 NM_001024956 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr2-14182 chr2 206532059 206532269 + 7.31 0.000 intron (NM_003812, intron 4 of 25) intron (NM_003812, intron 4 of 25) 88632 NM_003812 8745 Hs.370287 NM_003812 ENSG00000114948 ADAM23 MDC-3|MDC3 ADAM metallopeptidase domain 23 protein-coding chr15-3267 chr15 76564365 76564575 + 7.31 0.000 intron (NR_148227, intron 23 of 32) L1PREC2|LINE|L1 -22177 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr1-14564 chr1 53129945 53130155 + 7.31 0.000 intron (NR_109858, intron 2 of 10) intron (NR_109858, intron 2 of 10) 12588 NM_006671 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr8-4369 chr8 101928876 101929086 + 7.31 0.000 intron (NM_001040624, intron 3 of 7) intron (NM_001040624, intron 3 of 7) -55451 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr3-9579 chr3 54836513 54836723 + 7.31 0.000 intron (NM_018398, intron 14 of 37) (GTTTT)n|Simple_repeat|Simple_repeat 64637 NR_046666 100874237 Hs.570583 NR_046666 ENSG00000243715 CACNA2D3-AS1 - CACNA2D3 antisense RNA 1 ncRNA chr5-7228 chr5 9482581 9482791 + 7.31 0.000 intron (NM_003966, intron 1 of 22) MER63A|DNA|hAT-Blackjack -28647 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr14-3434 chr14 98328641 98328851 + 7.31 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -350622 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr9-2848 chr9 127741083 127741293 + 7.31 0.000 intron (NM_001252334, intron 9 of 11) MIRb|SINE|MIR -5894 NM_001134430 27433 Hs.444106 NM_130459 ENSG00000160404 TOR2A TORP1 torsin family 2 member A protein-coding chr8-7122 chr8 119987392 119987602 + 7.31 0.000 intron (NM_022783, intron 4 of 8) L1P3|LINE|L1 113775 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr13-1978 chr13 20229980 20230190 + 7.31 0.000 intron (NM_001110221, intron 1 of 2) intron (NM_001110221, intron 1 of 2) 1148 NM_006783 10804 Hs.511757 NM_006783 ENSG00000121742 GJB6 CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2 gap junction protein beta 6 protein-coding chr10-3811 chr10 132645036 132645246 + 7.31 0.000 intron (NM_005539, intron 2 of 15) intron (NM_005539, intron 2 of 15) -36134 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr17-5867 chr17 68232866 68233076 + 7.31 0.000 intron (NM_001346472, intron 2 of 7) MLT1A|LTR|ERVL-MaLR -14603 NM_001346474 51321 Hs.293560 NM_016627 ENSG00000196704 AMZ2 - archaelysin family metallopeptidase 2 protein-coding chr11-4917 chr11 64061005 64061215 + 7.31 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -42780 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr11-4015 chr11 7532551 7532761 + 7.31 0.000 intron (NM_003621, intron 1 of 23) intron (NM_003621, intron 1 of 23) 18657 NM_003621 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chrX-5165 chrX 132505136 132505346 + 7.31 0.000 Intergenic Intergenic -15206 NM_001170704 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr15-3686 chr15 40744645 40744855 + 7.31 0.000 intron (NM_001323897, intron 5 of 12) intron (NM_001323897, intron 5 of 12) 10504 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chrX-3823 chrX 148786315 148786525 + 7.31 0.000 intron (NM_001170628, intron 1 of 17) MLT1B|LTR|ERVL-MaLR 67329 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr1-12891 chr1 110687269 110687479 + 7.31 0.000 Intergenic Intergenic -12434 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding chr9-5002 chr9 22938208 22938418 + 7.31 0.000 Intergenic Intergenic 292113 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr3-6705 chr3 133718385 133718595 + 7.31 0.000 intron (NM_001354703, intron 7 of 22) intron (NM_001354703, intron 7 of 22) -27903 NM_001354704 7018 Hs.518267 NM_001063 ENSG00000091513 TF HEL-S-71p|PRO1557|PRO2086|TFQTL1 transferrin protein-coding chrX-4374 chrX 50370071 50370281 + 7.31 0.000 intron (NM_001013742, intron 27 of 27) intron (NM_001013742, intron 27 of 27) 85634 NM_033670 85417 Hs.130310 NM_033031 ENSG00000147082 CCNB3 - cyclin B3 protein-coding chr5-6702 chr5 65810869 65811079 + 7.31 0.000 intron (NM_020726, intron 11 of 12) AluJb|SINE|Alu 88769 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chr4-3072 chr4 146308919 146309129 + 7.31 0.000 intron (NM_001029998, intron 6 of 11) intron (NM_001029998, intron 6 of 11) 94486 NM_001354631 345051 Hs.170876 NM_001354631 ENSG00000250673 REELD1 - reeler domain containing 1 protein-coding chr15-3279 chr15 77526148 77526358 + 7.31 0.000 non-coding (NR_135692, exon 1 of 2) non-coding (NR_135692, exon 1 of 2) 658 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr2-6326 chr2 73260701 73260911 + 7.31 0.000 exon (NM_001080410, exon 14 of 17) exon (NM_001080410, exon 14 of 17) 23672 NM_001371389 chr19-6856 chr19 43410486 43410696 + 7.31 0.000 intron (NM_031451, intron 4 of 8) L2b|LINE|L2 -4299 NM_001130011 83639 Hs.97978 NM_031451 ENSG00000131126 TEX101 CT131|GTPR867|NYD-SP8|PRO1884|SGRG|SPATA44|TES101RP testis expressed 101 protein-coding chr11-8500 chr11 121393670 121393880 + 7.31 0.000 Intergenic Intergenic -58539 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr2-11123 chr2 134450982 134451192 + 7.31 0.000 3' UTR (NM_002410, exon 16 of 16) 3' UTR (NM_002410, exon 16 of 16) 197015 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chrX-2360 chrX 66303936 66304146 + 7.31 0.000 Intergenic L3|LINE|CR1 136291 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr19-6779 chr19 40881906 40882116 + 7.31 0.000 intron (NM_000764, intron 1 of 8) intron (NM_000764, intron 1 of 8) 741 NM_000764 1549 Hs.719890 NM_000764 ENSG00000198077 CYP2A7 CPA7|CPAD|CYP2A|CYPIIA7|P450-IIA4 cytochrome P450 family 2 subfamily A member 7 protein-coding chr11-9408 chr11 58204203 58204413 + 7.31 0.000 promoter-TSS (NM_001004459) promoter-TSS (NM_001004459) -127 NM_001004459 219958 Hs.553644 NM_001004459 ENSG00000197887 OR1S2 OR11-231 olfactory receptor family 1 subfamily S member 2 protein-coding chr2-12242 chr2 44060989 44061199 + 7.31 0.000 Intergenic Intergenic -65105 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr9-5946 chr9 133763109 133763319 + 7.31 0.000 3' UTR (NM_003371, exon 27 of 27) 3' UTR (NM_003371, exon 27 of 27) -23259 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr17-6484 chr17 21177692 21177902 + 7.31 0.000 intron (NM_015510, intron 2 of 6) intron (NM_015510, intron 2 of 6) 11610 NM_001330159 25979 Hs.386989 NM_015510 ENSG00000109016 DHRS7B CGI-93|SDR32C1 dehydrogenase/reductase 7B protein-coding chr7-4885 chr7 116692870 116693080 + 7.31 0.000 intron (NM_001324402, intron 1 of 19) intron (NM_001324402, intron 1 of 19) 20779 NM_001324401 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr2-6996 chr2 139108801 139109011 + 7.31 0.000 Intergenic L1PA8A|LINE|L1 211582 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr5-8909 chr5 157031460 157031670 + 7.31 0.000 intron (NM_001308156, intron 7 of 7) AluSq2|SINE|Alu 26676 NM_012206 26762 Hs.129711 NM_012206 ENSG00000113249 HAVCR1 CD365|HAVCR|HAVCR-1|KIM-1|KIM1|TIM|TIM-1|TIM1|TIMD-1|TIMD1 hepatitis A virus cellular receptor 1 protein-coding chr3-2881 chr3 47797466 47797676 + 7.31 0.000 Intergenic AluJb|SINE|Alu -5338 NM_014966 22907 Hs.517948 NM_014966 ENSG00000132153 DHX30 DDX30|NEDMIAL|RETCOR DExH-box helicase 30 protein-coding chr5-7869 chr5 73143885 73144095 + 7.31 0.000 intron (NR_134252, intron 1 of 1) intron (NR_134252, intron 1 of 1) 6602 NR_134252 105379030 NR_134252 ENSG00000251599 LOC105379030 - uncharacterized LOC105379030 ncRNA chr3-8597 chr3 160573537 160573747 + 7.31 0.000 Intergenic LTR12C|LTR|ERV1 -8071 NM_002268 3840 Hs.467866 NM_002268 ENSG00000186432 KPNA4 IPOA3|QIP1|SRP3 karyopherin subunit alpha 4 protein-coding chr2-8798 chr2 167905034 167905244 + 7.31 0.000 intron (NR_131227, intron 1 of 4) intron (NR_131227, intron 1 of 4) 36005 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr12-7457 chr12 63385457 63385667 + 7.31 0.000 Intergenic ERVL-B4-int|LTR|ERVL -232752 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr8-6187 chr8 34279463 34279673 + 7.31 0.000 Intergenic L1MC1|LINE|L1 -504353 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr8-5509 chr8 60259628 60259838 + 7.31 0.000 intron (NR_135821, intron 3 of 9) intron (NR_135821, intron 3 of 9) 21667 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chrX-4556 chrX 69518700 69518910 + 7.31 0.000 intron (NM_015686, intron 1 of 2) HAL1|LINE|L1 13570 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr1-15296 chr1 116847724 116847934 + 7.31 0.000 Intergenic Intergenic -62087 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr5-8383 chr5 124103310 124103520 + 7.31 0.000 intron (NR_125774, intron 4 of 5) AluSx1|SINE|Alu 335105 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr3-4157 chr3 124429114 124429324 + 7.31 0.000 intron (NM_001024660, intron 15 of 59) intron (NM_001024660, intron 15 of 59) 54887 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr1-10838 chr1 204138254 204138464 + 7.31 0.000 intron (NM_001297762, intron 4 of 6) intron (NM_001297762, intron 4 of 6) -3049 NR_123739 101929441 Hs.736889 NR_123739 ENSG00000230550 ERLNC1 ElncRNA1|TC0101441 estrogen receptor responsive lncRNA 1 ncRNA chr3-11189 chr3 193133283 193133493 + 7.31 0.000 Intergenic Intergenic -107834 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr1-10457 chr1 160866436 160866646 + 7.31 0.000 Intergenic Intergenic -3654 NM_001166664 51744 Hs.157872 NM_016382 ENSG00000122223 CD244 2B4|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 molecule protein-coding chr11-6600 chr11 73100658 73100868 + 7.31 0.000 intron (NM_014824, intron 2 of 19) MIRb|SINE|MIR 41555 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr3-9343 chr3 46399783 46399993 + 7.31 0.000 intron (NR_125406, intron 1 of 3) L2|LINE|L2 7171 NR_125406 102724297 Hs.622021 NR_125406 LOC102724297 - uncharacterized LOC102724297 ncRNA chr7-5813 chr7 82745234 82745444 + 7.31 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -301383 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr2-5916 chr2 11331403 11331613 + 7.31 0.000 intron (NM_001321643, intron 1 of 32) intron (NM_001321643, intron 1 of 32) 13128 NM_004850 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr16-6303 chr16 47496412 47496622 + 7.31 0.000 intron (NM_001031835, intron 2 of 31) intron (NM_001031835, intron 2 of 31) 35186 NM_001031835 5257 Hs.78060 NM_000293 ENSG00000102893 PHKB - phosphorylase kinase regulatory subunit beta protein-coding chr11-5356 chr11 64427585 64427795 + 7.31 0.000 Intergenic L1M4|LINE|L1 -21367 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr16-3615 chr16 83890979 83891189 + 7.31 0.000 Intergenic Intergenic -8031 NM_012213 23417 Hs.644610 NM_012213 ENSG00000103150 MLYCD MCD malonyl-CoA decarboxylase protein-coding chr10-8927 chr10 115879737 115879947 + 7.31 0.000 intron (NM_207303, intron 28 of 28) intron (NM_207303, intron 28 of 28) 314947 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr17-4908 chr17 74770782 74770992 + 7.31 0.000 non-coding (NR_130954, exon 6 of 6) non-coding (NR_130954, exon 6 of 6) 5458 NM_001305087 26151 Hs.144058 NM_015654 ENSG00000109065 NAT9 EBSP, hNATL N-acetyltransferase 9 (putative) protein-coding chr3-8469 chr3 124762606 124762816 + 7.31 0.000 3' UTR (NM_001354765, exon 15 of 15) 3' UTR (NM_001354765, exon 15 of 15) 30272 NR_036088 100422864 NR_036088 ENSG00000265981 MIR544B - microRNA 544b ncRNA chr11-10100 chr11 86524166 86524376 + 7.31 0.000 intron (NM_001014811, intron 3 of 13) intron (NM_001014811, intron 3 of 13) 147927 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr17-4848 chr17 61936016 61936226 + 7.31 0.000 Intergenic L1PREC2|LINE|L1 -8139 NM_001351695 57508 Hs.279646 NM_020748 ENSG00000108506 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding chr2-10001 chr2 21591178 21591388 + 7.31 0.000 Intergenic L2c|LINE|L2 119369 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr1-8983 chr1 10218023 10218233 + 7.31 0.000 intron (NM_001365952, intron 1 of 48) intron (NM_001365952, intron 1 of 48) 6512 NM_001365952 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr3-6153 chr3 57512334 57512544 + 7.31 0.000 intron (NM_198564, intron 4 of 11) L1MB2|LINE|L1 31905 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chrX-5219 chrX 135436982 135437192 + 7.31 0.000 Intergenic CpG 15143 NM_203306 399668 Hs.374414 NM_203306 ENSG00000178947 SMIM10L2A LED|LINC00086|LINC00087|LINC0086|NCRNA00086|NCRNA00087|SMIM10L2B small integral membrane protein 10 like 2A protein-coding chr5-3026 chr5 12951130 12951340 + 7.31 0.000 intron (NR_147005, intron 2 of 4) intron (NR_147005, intron 2 of 4) 81651 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr14-4385 chr14 28417615 28417825 + 7.31 0.000 Intergenic HERVK3-int|LTR|ERVK 347599 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr3-8974 chr3 16178586 16178796 + 7.31 0.000 intron (NM_001319051, intron 1 of 9) intron (NM_001319051, intron 1 of 9) 4011 NM_001319051 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr18-3150 chr18 41207743 41207953 + 7.31 0.000 Intergenic Intergenic 312829 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr4-7026 chr4 26013795 26014005 + 7.31 0.000 Intergenic MIRb|SINE|MIR 99708 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr4-8187 chr4 132605503 132605713 + 7.31 0.000 intron (NR_126401, intron 1 of 3) LTR80A|LTR|ERVL 14519 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr16-5187 chr16 9939779 9939989 + 7.31 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 242183 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr10-6955 chr10 65241887 65242097 + 7.31 0.000 Intergenic Intergenic -317474 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA chr10-6206 chr10 36171463 36171673 + 7.31 0.000 Intergenic Intergenic 393266 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr9-5409 chr9 94772394 94772604 + 7.31 0.000 intron (NM_001193331, intron 2 of 7) LFSINE_Vert|SINE|tRNA 12850 NM_001193329 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr6-5799 chr6 11199042 11199252 + 7.31 0.000 3' UTR (NM_182966, exon 3 of 3) 3' UTR (NM_182966, exon 3 of 3) 33521 NM_006403 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr1-13390 chr1 1741040 1741250 + 7.31 0.000 intron (NM_182838, intron 1 of 5) L1MC4|LINE|L1 4854 NM_001199787 9906 Hs.655255 NM_182838 ENSG00000215790 SLC35E2A SLC35E2 solute carrier family 35 member E2A protein-coding chr3-5298 chr3 124812982 124813192 + 7.31 0.000 intron (NM_002213, intron 8 of 14) intron (NM_002213, intron 8 of 14) 74278 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr7-9552 chr7 141144944 141145154 + 7.31 0.000 intron (NM_001195278, intron 1 of 3) intron (NM_001195278, intron 1 of 3) 70985 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr13-2639 chr13 78786641 78786851 + 7.31 0.000 TTS (NR_046869) TTS (NR_046869) 53304 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr2-9194 chr2 216428266 216428476 + 7.31 0.000 intron (NM_001127207, intron 6 of 17) Charlie30a|DNA|hAT-Charlie 15606 NM_001127207 50485 Hs.516674 NM_014140 ENSG00000138375 SMARCAL1 HARP|HHARP SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 protein-coding chr13-3511 chr13 21621922 21622132 + 7.31 0.000 Intergenic L2c|LINE|L2 -17857 NM_152726 221154 Hs.412103 NM_152726 ENSG00000165487 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding chr5-3445 chr5 158599413 158599623 + 7.31 0.000 Intergenic Intergenic -189745 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr3-8059 chr3 7909601 7909811 + 7.31 0.000 Intergenic MIR3|SINE|MIR 106601 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr7-2431 chr7 107685682 107685892 + 7.31 0.000 intron (NM_000441, intron 8 of 20) intron (NM_000441, intron 8 of 20) -23989 NR_028137 286002 Hs.512611 NR_028137 SLC26A4-AS1 - SLC26A4 antisense RNA 1 ncRNA chr1-12112 chr1 160694535 160694745 + 7.31 0.000 intron (NM_001778, intron 1 of 3) HERVK-int|LTR|ERVK 17182 NM_001778 962 Hs.243564 NM_001778 ENSG00000117091 CD48 BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48 CD48 molecule protein-coding chr7-6469 chr7 2929284 2929494 + 7.31 0.000 intron (NM_001324281, intron 13 of 25) intron (NM_001324281, intron 13 of 25) -85081 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr19-5654 chr19 5953990 5954200 + 7.31 0.000 intron (NM_003624, intron 2 of 16) intron (NM_003624, intron 2 of 16) 24045 NM_007320 8498 Hs.531752 NM_003624 ENSG00000031823 RANBP3 - RAN binding protein 3 protein-coding chr6-2947 chr6 35118283 35118493 + 7.31 0.000 exon (NM_001261821, exon 11 of 11) exon (NM_001261821, exon 11 of 11) 22951 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr22-3299 chr22 50424766 50424976 + 7.31 0.000 intron (NM_001242899, intron 10 of 22) AluSc5|SINE|Alu 17429 NR_162128 113218480 NR_162128 MIR12114 - microRNA 12114 ncRNA chr4-3495 chr4 139582136 139582346 + 7.31 0.000 Intergenic MER91B|DNA|hAT-Tip100 -25472 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr4-4208 chr4 15320786 15320996 + 7.31 0.000 intron (NR_125911, intron 1 of 5) intron (NR_125911, intron 1 of 5) -19097 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr9-4661 chr9 117859368 117859578 + 7.31 0.000 Intergenic L2b|LINE|L2 155070 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr12-2689 chr12 95413554 95413764 + 7.31 0.000 Intergenic MIRc|SINE|MIR -60493 NM_001317183 10988 Hs.444986 NM_006838 ENSG00000111142 METAP2 MAP2|MNPEP|p67eIF2 methionyl aminopeptidase 2 protein-coding chr21-1339 chr21 29641910 29642120 + 7.31 0.000 intron (NM_000830, intron 7 of 16) intron (NM_000830, intron 7 of 16) 45975 NR_033368 100379661 Hs.659368 NR_033368 ENSG00000156273 GRIK1-AS2 C21orf41|NCRNA00258 GRIK1 antisense RNA 2 ncRNA chr7-3112 chr7 33825184 33825394 + 7.31 0.000 Intergenic Intergenic -79626 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr1-9422 chr1 32884198 32884408 + 7.31 0.000 Intergenic Intergenic -2188 NM_002143 3208 Hs.632391 NM_002143 ENSG00000121905 HPCA BDR2|DYT2 hippocalcin protein-coding chr12-5591 chr12 39920736 39920946 + 7.31 0.000 intron (NM_052885, intron 4 of 9) L2b|LINE|L2 185240 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr5-7996 chr5 84862162 84862372 + 7.31 0.000 Intergenic LTR9D|LTR|ERV1 -477387 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr4-6325 chr4 89482224 89482434 + 7.31 0.000 Intergenic Intergenic -174529 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr19-2658 chr19 10258967 10259177 + 7.31 0.000 3' UTR (NM_146388, exon 8 of 8) 3' UTR (NM_146388, exon 8 of 8) 6858 NM_015956 51073 Hs.279652 NM_015956 ENSG00000105364 MRPL4 CGI-28|L4mt mitochondrial ribosomal protein L4 protein-coding chr14-5138 chr14 90451765 90451975 + 7.31 0.000 TTS (NR_146492) TTS (NR_146492) 3247 NR_146493 101930294 NR_146492 ENSG00000258678 LINC02317 - long intergenic non-protein coding RNA 2317 ncRNA chr10-3108 chr10 29633243 29633453 + 7.31 0.000 intron (NM_001323599, intron 3 of 38) intron (NM_001323599, intron 3 of 38) 1623 NM_021738 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr12-8278 chr12 125507606 125507816 + 7.31 0.000 intron (NM_052907, intron 3 of 8) L2a|LINE|L2 -114741 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr5-6738 chr5 76584631 76584841 + 7.31 0.000 intron (NM_006633, intron 5 of 35) intron (NM_006633, intron 5 of 35) 24233 NR_134278 101929109 Hs.665172 NR_134278 ENSG00000249713 LOC101929109 - uncharacterized LOC101929109 ncRNA chr1-6849 chr1 107264723 107264933 + 7.31 0.000 intron (NM_001113226, intron 1 of 6) intron (NM_001113226, intron 1 of 6) 116759 NM_001113228 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr6-6674 chr6 164884785 164884995 + 7.31 0.000 Intergenic L1MD2|LINE|L1 -62827 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr15-4794 chr15 72135730 72135940 + 7.31 0.000 intron (NM_145204, intron 1 of 1) intron (NM_145204, intron 1 of 1) 17432 NM_001172111 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr3-5179 chr3 66639216 66639426 + 7.31 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 99015 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr3-10251 chr3 123437328 123437538 + 7.31 0.000 intron (NM_183357, intron 1 of 20) LTR16C|LTR|ERVL 11112 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr15-3402 chr15 89321826 89322036 + 7.31 0.000 intron (NM_001126131, intron 15 of 22) intron (NM_001126131, intron 15 of 22) 4879 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr1-11593 chr1 207109625 207109835 + 7.31 0.000 intron (NM_000715, intron 1 of 11) intron (NM_000715, intron 1 of 11) 5497 NM_000715 722 Hs.1012 NM_000715 ENSG00000123838 C4BPA C4BP|PRP complement component 4 binding protein alpha protein-coding chr5-9073 chr5 171399248 171399458 + 7.31 0.000 intron (NM_001355010, intron 3 of 6) AluJr4|SINE|Alu 11504 NM_001355009 4869 Hs.557550 NM_002520 ENSG00000181163 NPM1 B23|NPM nucleophosmin 1 protein-coding chr3-5221 chr3 86171267 86171477 + 7.31 0.000 Intergenic AluSx3|SINE|Alu -310571 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chrX-3116 chrX 3576850 3577060 + 7.31 0.000 Intergenic Intergenic -44704 NR_145722 109616969 NR_145722 ENSG00000212214 SNORA48B - small nucleolar RNA, H/ACA box 48B snoRNA chrX-2802 chrX 134145552 134145762 + 7.31 0.000 Intergenic AluJb|SINE|Alu 23795 NR_029852 574031 NR_029852 ENSG00000284499 MIR363 MIR-363|MIRN363|hsa-mir-363 microRNA 363 ncRNA chr17-5909 chr17 74388761 74388971 + 7.31 0.000 Intergenic Intergenic 21360 NM_001331076 350383 Hs.574368 NM_181790 ENSG00000257008 GPR142 GPRg1b|PGR2 G protein-coupled receptor 142 protein-coding chr14-2132 chr14 76985128 76985338 + 7.31 0.000 Intergenic Intergenic 25595 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr14-3677 chr14 99367606 99367816 + 7.31 0.000 Intergenic AluSc|SINE|Alu -95514 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr6-8220 chr6 135853257 135853467 + 7.31 0.000 intron (NM_018945, intron 1 of 12) intron (NM_018945, intron 1 of 12) 1661 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr10-8594 chr10 96505489 96505699 + 7.31 0.000 intron (NM_012465, intron 1 of 20) MIR|SINE|MIR 8332 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr2-11159 chr2 147785027 147785237 + 7.31 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -59385 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr18-3437 chr18 64941639 64941849 + 7.31 0.000 Intergenic Intergenic -681689 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr4-4349 chr4 38243094 38243304 + 7.31 0.000 Intergenic Intergenic 123245 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr15-3136 chr15 66629773 66629983 + 7.31 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) 47688 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr11-5376 chr11 65340266 65340476 + 7.31 0.000 intron (NM_001330308, intron 1 of 11) intron (NM_001330308, intron 1 of 11) 6519 NM_001330308 5977 Hs.13495 NM_006268 ENSG00000133884 DPF2 CSS7|REQ|UBID4|ubi-d4 double PHD fingers 2 protein-coding chr7-5477 chr7 41802037 41802247 + 7.31 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -99052 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr10-5704 chr10 100607676 100607886 + 7.31 0.000 Intergenic Intergenic 71838 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr8-6290 chr8 42575563 42575773 + 7.31 0.000 Intergenic LTR12C|LTR|ERV1 -33714 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr15-3832 chr15 77893351 77893561 + 7.31 0.000 Intergenic Intergenic 33390 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr1-16043 chr1 201222904 201223114 + 7.31 0.000 intron (NM_001164586, intron 20 of 23) intron (NM_001164586, intron 20 of 23) 32184 NM_001164586 91156 Hs.519024 NM_178275 ENSG00000163395 IGFN1 EEF1A2BP1 immunoglobulin like and fibronectin type III domain containing 1 protein-coding chr5-3970 chr5 10501363 10501573 + 7.31 0.000 non-coding (NR_104606, exon 1 of 3) non-coding (NR_104606, exon 1 of 3) 1260 NR_104606 101929412 Hs.508287 NR_104606 ENSG00000249396 LINC02212 - long intergenic non-protein coding RNA 2212 ncRNA chr14-4200 chr14 91237318 91237528 + 7.31 0.000 5' UTR (NM_001348437, exon 2 of 3) 5' UTR (NM_001348437, exon 2 of 3) 7281 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr9-5147 chr9 37879916 37880126 + 7.31 0.000 non-coding (NR_024872, exon 5 of 5) non-coding (NR_024872, exon 5 of 5) 24106 NM_033412 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr5-5744 chr5 170935634 170935844 + 7.31 0.000 intron (NM_022897, intron 12 of 27) L1PA5|LINE|L1 73721 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chr13-2113 chr13 89810468 89810678 + 7.31 0.000 Intergenic MER110|LTR|ERV1 -246160 NR_046991 100874139 Hs.742173 NR_046991 LINC00353 - long intergenic non-protein coding RNA 353 ncRNA chr5-5426 chr5 136888737 136888947 + 7.31 0.000 Intergenic Intergenic -239355 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr19-5752 chr19 19056587 19056797 + 7.31 0.000 intron (NM_001199196, intron 8 of 8) intron (NM_001199196, intron 8 of 8) -7302 NM_178526 284439 Hs.303669 NM_178526 ENSG00000181035 SLC25A42 MECREN solute carrier family 25 member 42 protein-coding chr8-5987 chr8 22060084 22060294 + 7.31 0.000 intron (NM_001114138, intron 1 of 14) intron (NM_001114138, intron 1 of 14) 1109 NM_001323392 2039 Hs.106124 NM_001978 ENSG00000158856 DMTN DMT|EPB49 dematin actin binding protein protein-coding chr11-9004 chr11 24312739 24312949 + 7.31 0.000 Intergenic Intergenic -184209 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr17-4435 chr17 43740551 43740761 + 7.31 0.000 Intergenic Intergenic 18135 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr12-7494 chr12 67223097 67223307 + 7.31 0.000 Intergenic LTR16E2|LTR|ERVL -46156 NM_018448 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr1-15439 chr1 153592922 153593132 + 7.31 0.000 Intergenic L1M7|LINE|L1 16328 NM_001317007 140576 Hs.515714 NM_080388 ENSG00000188643 S100A16 AAG13|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding chr5-4179 chr5 108234367 108234577 + 7.31 0.000 intron (NM_001163315, intron 4 of 8) MIRb|SINE|MIR 147626 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr1-7148 chr1 205109773 205109983 + 7.31 0.000 intron (NM_001193273, intron 3 of 13) L3|LINE|CR1 12100 NM_001193273 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr15-2925 chr15 45678770 45678980 + 7.31 0.000 intron (NM_021199, intron 6 of 9) Tigger15a|DNA|TcMar-Tigger -26320 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr2-11518 chr2 238548659 238548869 + 7.31 0.000 intron (NR_037809, intron 2 of 2) intron (NR_037809, intron 2 of 2) 6735 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr16-5882 chr16 2013566 2013776 + 7.31 0.000 Intergenic Intergenic -3850 NM_178167 90850 Hs.343828 NM_178167 ENSG00000167962 ZNF598 HEL2 zinc finger protein 598 protein-coding chr1-7546 chr1 189385010 189385220 + 7.31 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 1090895 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr5-5470 chr5 139356994 139357204 + 7.31 0.000 intron (NM_001033112, intron 1 of 3) L1M4|LINE|L1 14665 NM_001033112 51247 Hs.396644 NM_016480 ENSG00000120727 PAIP2 PAIP-2|PAIP2A poly(A) binding protein interacting protein 2 protein-coding chr10-3878 chr10 44479247 44479457 + 7.31 0.000 Intergenic L1M4|LINE|L1 -94255 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr4-6312 chr4 87234821 87235031 + 7.31 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -14308 NR_120447 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr2-3059 chr2 96894670 96894880 + 7.31 0.000 intron (NM_001122646, intron 13 of 16) (ACCC)n|Simple_repeat|Simple_repeat 387 NM_001172667 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr22-3539 chr22 12599302 12599512 + 7.31 0.000 Intergenic Intergenic 702001 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr15-4276 chr15 36075387 36075597 + 7.31 0.000 Intergenic Intergenic 148636 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr9-8216 chr9 109322424 109322634 + 7.31 0.000 Intergenic Intergenic -1565 NM_019114 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr3-6974 chr3 166978064 166978274 + 7.31 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 79486 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr1-10814 chr1 203056029 203056239 + 7.31 0.000 exon (NM_001304332, exon 17 of 29) exon (NM_001304332, exon 17 of 29) -27661 NR_160550 114004358 NR_160550 MYOPARR - myogenin promoter associated myogenic regulatory antisense long non coding RNA ncRNA chr12-6115 chr12 126481688 126481898 + 7.31 0.000 Intergenic Intergenic -32466 NR_147498 283435 Hs.667334 NR_147498 LINC02825 - long intergenic non-protein coding RNA 2825 ncRNA chr1-4424 chr1 222250520 222250730 + 7.31 0.000 Intergenic LTR24|LTR|ERV1 -272105 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr18-1179 chr18 23354486 23354696 + 7.31 0.000 intron (NM_032933, intron 12 of 14) intron (NM_032933, intron 12 of 14) 83370 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr8-7447 chr8 141101726 141101936 + 7.31 0.000 Intergenic MIRc|SINE|MIR -26758 NM_001352890 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr4-3792 chr4 105766083 105766293 + 7.31 0.000 intron (NM_001370181, intron 5 of 11) LTR33A|LTR|ERVL 55375 NM_001031720 79807 Hs.161429 NM_024751 ENSG00000138780 GSTCD - glutathione S-transferase C-terminal domain containing protein-coding chr1-9908 chr1 71706066 71706276 + 7.31 0.000 intron (NM_173808, intron 3 of 6) L1M1|LINE|L1 130841 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr8-3193 chr8 111007635 111007845 + 7.31 0.000 intron (NR_125416, intron 1 of 4) AluSz|SINE|Alu 19693 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr7-9618 chr7 149774451 149774661 + 7.31 0.000 promoter-TSS (NM_207336) promoter-TSS (NM_207336) -968 NM_001329856 168544 Hs.726477 NM_207336 ENSG00000181444 ZNF467 EZI|Zfp467 zinc finger protein 467 protein-coding chr2-11045 chr2 111658321 111658531 + 7.31 0.000 Intergenic AluJb|SINE|Alu 112708 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr15-3107 chr15 64799014 64799224 + 7.31 0.000 Intergenic SVA_D|Retroposon|SVA -23530 NR_138350 348093 Hs.436518 NM_194272 ENSG00000166831 RBPMS2 - RNA binding protein, mRNA processing factor 2 protein-coding chr16-1891 chr16 85898561 85898771 + 7.31 0.000 promoter-TSS (NM_002163) promoter-TSS (NM_002163) -496 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr2-14566 chr2 231327546 231327756 + 7.31 0.000 intron (NM_001352759, intron 19 of 19) L1MD1|LINE|L1 -35057 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr8-2786 chr8 120952657 120952867 + 7.31 0.000 Intergenic Intergenic -140716 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr4-7789 chr4 96693396 96693606 + 7.31 0.000 intron (NR_147149, intron 3 of 3) L2a|LINE|L2 382798 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr8-4086 chr8 67987607 67987817 + 7.31 0.000 intron (NM_024870, intron 1 of 39) intron (NM_024870, intron 1 of 39) 35666 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr17-8641 chr17 81627311 81627521 + 7.31 0.000 intron (NM_001369698, intron 2 of 16) intron (NM_001369698, intron 2 of 16) 9696 NM_017921 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding chr2-12264 chr2 45291251 45291461 + 7.31 0.000 Intergenic Intergenic -36415 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr20-2345 chr20 13985218 13985428 + 7.31 0.000 intron (NM_001363752, intron 1 of 16) L2c|LINE|L2 5291 NM_001271539 80343 Hs.590879 NM_025229 ENSG00000101251 SEL1L2 C20orf50|sel-1L2 SEL1L2 adaptor subunit of ERAD E3 ligase protein-coding chr17-8439 chr17 76878270 76878480 + 7.31 0.000 intron (NM_144677, intron 2 of 16) intron (NM_144677, intron 2 of 16) 5728 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B protein-coding chr2-7044 chr2 158505971 158506181 + 7.31 0.000 intron (NM_001005476, intron 1 of 20) intron (NM_001005476, intron 1 of 20) 49124 NM_001304970 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr4-8609 chr4 171859415 171859625 + 7.31 0.000 intron (NM_001034845, intron 2 of 12) MER77|LTR|ERVL -45913 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr4-7532 chr4 75857655 75857865 + 7.31 0.000 Intergenic Intergenic 44692 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr12-6711 chr12 4900615 4900825 + 7.31 0.000 Intergenic Intergenic -9185 NM_000217 3736 Hs.416139 NM_000217 ENSG00000111262 KCNA1 AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1 potassium voltage-gated channel subfamily A member 1 protein-coding chr1-9771 chr1 55812369 55812579 + 7.31 0.000 Intergenic Intergenic 132489 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr11-5364 chr11 64665677 64665887 + 7.31 0.000 intron (NM_015080, intron 9 of 22) intron (NM_015080, intron 9 of 22) -22237 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr8-5769 chr8 142077780 142077990 + 7.31 0.000 Intergenic L1MC3|LINE|L1 -98454 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr10-4820 chr10 11885031 11885241 + 7.31 0.000 intron (NR_038222, intron 2 of 5) intron (NR_038222, intron 2 of 5) 9574 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr3-6358 chr3 86488464 86488674 + 7.31 0.000 intron (NR_135563, intron 1 of 1) L1PA8|LINE|L1 6626 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr1-15815 chr1 178487250 178487460 + 7.31 0.000 Intergenic Intergenic -25754 NM_032126 84066 Hs.534501 NM_032126 ENSG00000240021 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding chr11-7078 chr11 121337508 121337718 + 7.31 0.000 Intergenic Intergenic 44745 NM_001024956 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr14-4747 chr14 61799199 61799409 + 7.31 0.000 Intergenic Intergenic -12858 NM_001367650 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr1-10453 chr1 160756462 160756672 + 7.31 0.000 Intergenic Intergenic 17320 NM_001282596 57823 Hs.517265 NM_021181 ENSG00000026751 SLAMF7 19A|CD319|CRACC|CS1 SLAM family member 7 protein-coding chr12-3877 chr12 114416556 114416766 + 7.31 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -8219 NM_000192 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box transcription factor 5 protein-coding chr1-6242 chr1 226195762 226195972 + 7.31 0.000 Intergenic MIRc|SINE|MIR -9126 NM_022735 64746 Hs.520207 NM_022735 ENSG00000182827 ACBD3 GCP60|GOCAP1|GOLPH1|PAP7 acyl-CoA binding domain containing 3 protein-coding chr2-8730 chr2 159179726 159179936 + 7.31 0.000 intron (NM_001350065, intron 15 of 27) intron (NM_001350065, intron 15 of 27) -7004 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr22-2575 chr22 28978308 28978518 + 7.31 0.000 intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 53063 NR_046851 100874123 Hs.674708 NR_046851 ENSG00000177993 ZNRF3-AS1 - ZNRF3 antisense RNA 1 ncRNA chr1-15561 chr1 158884416 158884626 + 7.31 0.000 Intergenic MER63C|DNA|hAT-Blackjack -47031 NM_198930 149628 Hs.710248 NM_152501 ENSG00000163564 PYHIN1 IFIX pyrin and HIN domain family member 1 protein-coding chr16-6980 chr16 86909647 86909857 + 7.31 0.000 Intergenic Intergenic -148032 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr16-6400 chr16 54318244 54318454 + 7.31 0.000 Intergenic Intergenic -31562 NM_024336 79191 Hs.499205 NM_024336 ENSG00000177508 IRX3 IRX-1|IRXB1 iroquois homeobox 3 protein-coding chr20-1880 chr20 46242030 46242240 + 7.31 0.000 intron (NM_021248, intron 2 of 11) MIRb|SINE|MIR 66363 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr21-1150 chr21 41362450 41362660 + 7.31 0.000 intron (NM_002463, intron 1 of 13) MER63D|DNA|hAT-Blackjack 528 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding chr6-3660 chr6 142995475 142995685 + 7.31 0.000 intron (NR_038987, intron 2 of 2) L1P2|LINE|L1 42002 NR_038987 100507489 Hs.486645 NR_038987 LINC01277 - long intergenic non-protein coding RNA 1277 ncRNA chr6-3170 chr6 122222797 122223007 + 7.31 0.000 Intergenic L2|LINE|L2 -176649 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr10-6606 chr10 90537781 90537991 + 7.31 0.000 intron (NR_110657, intron 1 of 6) MIR3|SINE|MIR 2919 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr3-8453 chr3 122052007 122052217 + 7.31 0.000 Intergenic L1M3d|LINE|L1 -3250 NM_175862 942 Hs.171182 NM_006889 ENSG00000114013 CD86 B7-2|B7.2|B70|CD28LG2|LAB72 CD86 molecule protein-coding chr10-5392 chr10 74758032 74758242 + 7.31 0.000 Intergenic Intergenic -67118 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr17-6955 chr17 44269299 44269509 + 7.31 0.000 Intergenic Intergenic -1269 NM_000342 6521 Hs.210751 NM_000342 ENSG00000004939 SLC4A1 AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR solute carrier family 4 member 1 (Diego blood group) protein-coding chr17-7233 chr17 1481108 1481318 + 7.31 0.000 intron (NM_001080779, intron 5 of 31) L2a|LINE|L2 4188 NM_001363855 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr6-3097 chr6 89346590 89346800 + 7.31 0.000 intron (NM_016021, intron 1 of 7) intron (NM_016021, intron 1 of 7) 6027 NM_016021 51465 Hs.163776 NM_016021 ENSG00000198833 UBE2J1 CGI-76|HSPC153|HSPC205|HSU93243|NCUBE-1|NCUBE1|UBC6|UBC6E|Ubc6p ubiquitin conjugating enzyme E2 J1 protein-coding chr8-3788 chr8 25977114 25977324 + 7.31 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 68194 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr10-7097 chr10 94666730 94666940 + 7.31 0.000 Intergenic MLT2C1|LTR|ERVL -16894 NM_000772 1562 Hs.511872 NM_000772 ENSG00000108242 CYP2C18 CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 cytochrome P450 family 2 subfamily C member 18 protein-coding chr3-9832 chr3 76045976 76046186 + 7.31 0.000 Intergenic L4_A_Mam|LINE|RTE-X -260532 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr5-8721 chr5 144183276 144183486 + 7.31 0.000 intron (NM_020768, intron 2 of 3) intron (NM_020768, intron 2 of 3) 12508 NM_020768 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr18-2472 chr18 45317365 45317575 + 7.31 0.000 intron (NM_001371319, intron 4 of 23) L2b|LINE|L2 104475 NM_001242692 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr6-6001 chr6 102115630 102115840 + 7.31 0.000 Intergenic L1PA15-16|LINE|L1 716750 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding KI270736.1-21 KI270736.1 151751 151961 + 7.31 0.000 NA NA NA NA chr2-10603 chr2 3639342 3639552 + 7.31 0.000 intron (NR_045659, intron 4 of 7) intron (NR_045659, intron 4 of 7) -18753 NM_018436 55821 Hs.97899 NM_018436 ENSG00000151360 ALLC ALC allantoicase protein-coding chr8-2527 chr8 23679660 23679870 + 7.31 0.000 non-coding (NR_046072, exon 2 of 2) non-coding (NR_046072, exon 2 of 2) 3124 NM_001256339 4824 Hs.55999 NM_006167 ENSG00000167034 NKX3-1 BAPX2|NKX3|NKX3.1|NKX3A NK3 homeobox 1 protein-coding chr13-4191 chr13 90206973 90207183 + 7.31 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -24104 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr18-2596 chr18 21693267 21693477 + 7.31 0.000 intron (NM_138340, intron 3 of 8) MIR|SINE|MIR 9854 NR_031565 100302135 NR_031565 ENSG00000221493 MIR320C1 MIR320C-1|MIRN320C1|hsa-mir-320c-1|mir-320c-1 microRNA 320c-1 ncRNA chr1-11906 chr1 53672645 53672855 + 7.31 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 61454 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr17-5825 chr17 65324718 65324928 + 7.31 0.000 Intergenic Plat_L3|LINE|CR1 -132718 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr1-13124 chr1 199347310 199347520 + 7.31 0.000 intron (NR_147896, intron 3 of 3) intron (NR_147896, intron 3 of 3) 198817 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chrX-3134 chrX 13606282 13606492 + 7.31 0.000 exon (NM_001167890, exon 6 of 12) exon (NM_001167890, exon 6 of 12) 16095 NR_106734 102466519 NR_106734 ENSG00000283493 MIR6086 hsa-mir-6086 microRNA 6086 ncRNA chr7-6121 chr7 122020604 122020814 + 7.31 0.000 intron (NM_001206839, intron 13 of 28) intron (NM_001206839, intron 13 of 28) 123540 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr2-14471 chr2 224579926 224580136 + 7.31 0.000 intron (NM_003590, intron 1 of 15) intron (NM_003590, intron 1 of 15) 5332 NM_003590 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr13-4268 chr13 97704336 97704546 + 7.31 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -249234 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr9-6958 chr9 102398264 102398474 + 7.31 0.000 Intergenic Intergenic -121268 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA chr5-5942 chr5 80861081 80861291 + 7.31 0.000 intron (NM_002439, intron 21 of 23) L1MCa|LINE|L1 -99177 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding chr14-3792 chr14 61193597 61193807 + 7.31 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 87636 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr6-4104 chr6 151141628 151141838 + 7.31 0.000 Intergenic L2c|LINE|L2 39058 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr13-3579 chr13 26985512 26985722 + 7.31 0.000 Intergenic Intergenic -139916 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr12-2228 chr12 55681253 55681463 + 7.31 0.000 promoter-TSS (NM_152637) promoter-TSS (NM_152637) -378 NM_152637 196410 Hs.51483 NM_152637 ENSG00000170439 METTL7B ALDI methyltransferase like 7B protein-coding chrX-3040 chrX 95177596 95177806 + 7.31 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -114475 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr7-6924 chr7 79964575 79964785 + 7.31 0.000 Intergenic Intergenic -170151 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr10-5697 chr10 100248359 100248569 + 7.31 0.000 intron (NM_001303404, intron 7 of 12) intron (NM_001303404, intron 7 of 12) -11162 NR_002954 677800 Hs.662165 NR_002954 ENSG00000212464 SNORA12 U108 small nucleolar RNA, H/ACA box 12 snoRNA chr11-5571 chr11 103105495 103105705 + 7.31 0.000 Intergenic Charlie1a|DNA|hAT-Charlie -3826 NM_001080463 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr15-4387 chr15 42710601 42710811 + 7.31 0.000 intron (NM_020759, intron 26 of 32) MLT1C|LTR|ERVL-MaLR 26422 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr20-4082 chr20 39312149 39312359 + 7.31 0.000 Intergenic Intergenic -87506 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr6-5132 chr6 122930077 122930287 + 7.31 0.000 Intergenic L1PA11|LINE|L1 -66053 NM_001010852 134829 Hs.486361 NM_001010852 ENSG00000146352 CLVS2 C6orf212|C6orf213|RLBP1L2|bA160A10.4 clavesin 2 protein-coding chr2-7364 chr2 2031825 2032035 + 7.31 0.000 intron (NM_015025, intron 4 of 24) intron (NM_015025, intron 4 of 24) -287302 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr6-4666 chr6 52603547 52603757 + 7.31 0.000 Intergenic Intergenic 26354 NR_103447 401264 Hs.544586 NR_103446 ENSG00000225791 TRAM2-AS1 - TRAM2 antisense RNA 1 (head to head) ncRNA chr16-2060 chr16 71729477 71729687 + 7.31 0.000 3' UTR (NM_001030007, exon 24 of 24) 3' UTR (NM_001030007, exon 24 of 24) -4881 NM_015020 23035 Hs.709458 NM_015020 ENSG00000040199 PHLPP2 PHLPPL|PPM3B PH domain and leucine rich repeat protein phosphatase 2 protein-coding chr3-3759 chr3 8440409 8440619 + 7.31 0.000 intron (NR_033378, intron 3 of 3) SVA_D|Retroposon|SVA 61144 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr11-5562 chr11 101349958 101350168 + 7.31 0.000 Intergenic Intergenic 169842 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr3-10032 chr3 103426783 103426993 + 7.31 0.000 Intergenic Intergenic 97228 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr15-4606 chr15 60762582 60762792 + 7.31 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 81118 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr11-7413 chr11 98694087 98694297 + 7.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR -326757 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr9-7018 chr9 118021906 118022116 + 7.31 0.000 Intergenic Intergenic 317608 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr13-2673 chr13 85738765 85738975 + 7.31 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 60549 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr12-2947 chr12 100504641 100504851 + 7.31 0.000 intron (NM_001206992, intron 1 of 8) MIRb|SINE|MIR 1386 NM_001206992 9971 Hs.282735 NM_005123 ENSG00000012504 NR1H4 BAR|FXR|HRR-1|HRR1|PFIC5|RIP14 nuclear receptor subfamily 1 group H member 4 protein-coding chr9-8125 chr9 100318231 100318441 + 7.31 0.000 intron (NM_001161584, intron 11 of 14) L1PB4|LINE|L1 34235 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr3-3976 chr3 53254885 53255095 + 7.31 0.000 intron (NM_001258028, intron 1 of 14) intron (NM_001258028, intron 1 of 14) 1032 NM_001064 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr9-8179 chr9 106305799 106306009 + 7.31 0.000 Intergenic Tigger12A|DNA|TcMar-Tigger -295024 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr16-6085 chr16 11688599 11688809 + 7.31 0.000 intron (NR_136673, intron 6 of 9) intron (NR_136673, intron 6 of 9) 20249 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr5-5709 chr5 167565669 167565879 + 7.31 0.000 intron (NM_001122679, intron 3 of 29) MIR|SINE|MIR -7885 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr13-1312 chr13 106918132 106918342 + 7.31 0.000 Intergenic CpG 264357 NR_047026 100874173 Hs.569297 NR_047026 ENSG00000230156 LINC00443 - long intergenic non-protein coding RNA 443 ncRNA chr10-8880 chr10 113435215 113435425 + 7.31 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -115511 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr7-8782 chr7 81029781 81029991 + 7.31 0.000 Intergenic Intergenic -107497 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr11-4423 chr11 88743471 88743681 + 7.31 0.000 intron (NM_001143831, intron 2 of 8) intron (NM_001143831, intron 2 of 8) 239000 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr3-7763 chr3 67195216 67195426 + 7.31 0.000 Intergenic Intergenic -30143 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr11-1803 chr11 123145346 123145556 + 7.31 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 49797 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr3-11008 chr3 180196223 180196433 + 7.31 0.000 Intergenic L2|LINE|L2 -159391 NM_001349399 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr14-3211 chr14 73902292 73902502 + 7.31 0.000 intron (NR_040251, intron 5 of 11) intron (NR_040251, intron 5 of 11) 15538 NM_021188 57862 Hs.270869 NM_021188 ENSG00000119725 ZNF410 APA-1|APA1 zinc finger protein 410 protein-coding chr3-7444 chr3 126667960 126668170 + 7.31 0.000 intron (NR_034158, intron 4 of 4) intron (NR_034158, intron 4 of 4) 5984 NR_034158 255330 Hs.145435 NM_174935 ENSG00000198284 NUP210P1 C3orf46 nucleoporin 210 pseudogene 1 pseudo chr2-2958 chr2 26477968 26478178 + 7.31 0.000 promoter-TSS (NM_004802) promoter-TSS (NM_004802) 51 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr11-5948 chr11 16939757 16939967 + 7.31 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -13840 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr10-8596 chr10 96614663 96614873 + 7.31 0.000 intron (NM_152309, intron 13 of 16) intron (NM_152309, intron 13 of 16) -27756 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr10-5795 chr10 106738543 106738753 + 7.31 0.000 intron (NM_001206569, intron 5 of 25) L3|LINE|CR1 426058 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr19-4446 chr19 4616764 4616974 + 7.31 0.000 Intergenic AluSx|SINE|Alu -22647 NM_152362 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr12-4909 chr12 67125763 67125973 + 7.31 0.000 Intergenic MamRTE1|LINE|RTE-BovB -29584 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr16-3519 chr16 25097695 25097905 + 7.31 0.000 Intergenic L2|LINE|L2 13755 NR_120306 102723510 Hs.569596 NR_120306 LCMT1-AS1 - LCMT1 antisense RNA 1 ncRNA chr6-4257 chr6 8446378 8446588 + 7.31 0.000 intron (NR_038980, intron 2 of 4) PABL_B|LTR|ERV1 10860 NR_038980 100506207 Hs.311049 NR_038979 ENSG00000285219 LOC100506207 - uncharacterized LOC100506207 ncRNA chr1-4486 chr1 19185439 19185649 + 7.31 0.000 intron (NM_020765, intron 14 of 105) L1ME1|LINE|L1 24722 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr9-8402 chr9 119788836 119789046 + 7.31 0.000 Intergenic Intergenic -146119 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr9-8357 chr9 117171694 117171904 + 7.31 0.000 intron (NM_001365068, intron 3 of 22) THE1D|LTR|ERVL-MaLR 9402 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr8-4172 chr8 80075752 80075962 + 7.31 0.000 intron (NM_001025253, intron 1 of 7) intron (NM_001025253, intron 1 of 7) 4973 NM_001287143 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr6-5352 chr6 149096169 149096379 + 7.31 0.000 Intergenic Intergenic -63613 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr6-6232 chr6 22517918 22518128 + 7.31 0.000 Intergenic L2|LINE|L2 -51543 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr1-11972 chr1 82762490 82762700 + 7.31 0.000 Intergenic Intergenic -140588 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr17-4192 chr17 17526216 17526426 + 7.31 0.000 intron (NM_148173, intron 2 of 6) intron (NM_148173, intron 2 of 6) -29926 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr10-2221 chr10 70099287 70099497 + 7.31 0.000 intron (NM_018649, intron 6 of 8) intron (NM_018649, intron 6 of 8) 33433 NM_032797 84883 Hs.650680 NM_032797 ENSG00000042286 AIFM2 AMID|PRG3 apoptosis inducing factor mitochondria associated 2 protein-coding chr16-4379 chr16 49664244 49664454 + 7.31 0.000 promoter-TSS (NM_001330533) promoter-TSS (NM_001330533) -25 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr3-10001 chr3 100087226 100087436 + 7.31 0.000 intron (NM_001042459, intron 1 of 4) L1ME1|LINE|L1 27182 NM_182909 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr8-3687 chr8 17565246 17565456 + 7.31 0.000 3' UTR (NM_001008539, exon 12 of 12) 3' UTR (NM_001008539, exon 12 of 12) -11082 NM_006207 5157 Hs.458573 NM_006207 ENSG00000104213 PDGFRL PDGRL|PRLTS platelet derived growth factor receptor like protein-coding chr14-3366 chr14 92125385 92125595 + 7.31 0.000 intron (NM_001322272, intron 1 of 15) intron (NM_001322272, intron 1 of 15) 3521 NM_001322270 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr15-3033 chr15 58989064 58989274 + 7.31 0.000 intron (NM_001270530, intron 1 of 13) intron (NM_001270530, intron 1 of 13) 1023 NM_001270530 54778 Hs.404423 NM_017610 ENSG00000157450 RNF111 ARK|hRNF111 ring finger protein 111 protein-coding chr3-6554 chr3 120795081 120795291 + 7.31 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 41171 NR_135570 101926983 Hs.553055 NR_135570 ENSG00000243593 LINC02049 - long intergenic non-protein coding RNA 2049 ncRNA chr4-8226 chr4 138259365 138259575 + 7.31 0.000 Intergenic Intergenic -17121 NM_014331 23657 Hs.390594 NM_014331 ENSG00000151012 SLC7A11 CCBR1|xCT solute carrier family 7 member 11 protein-coding chr19-3939 chr19 49802075 49802285 + 7.31 0.000 intron (NM_130787, intron 15 of 22) intron (NM_130787, intron 15 of 22) 10314 NR_106857 102465479 NR_106857 ENSG00000276270 MIR6799 hsa-mir-6799 microRNA 6799 ncRNA chr3-8154 chr3 32196691 32196901 + 7.31 0.000 Intergenic L3|LINE|CR1 -41883 NM_001320308 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr4-3934 chr4 164657999 164658209 + 7.31 0.000 Intergenic LTR17|LTR|ERV1 -96027 NM_001352885 100505989 Hs.328236 NM_001352885 ENSG00000248771 SMIM31 LINC01207 small integral membrane protein 31 protein-coding chr6-2541 chr6 19061131 19061341 + 7.31 0.000 Intergenic Intergenic 119244 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chrX-3190 chrX 43070820 43071030 + 7.31 0.000 Intergenic Intergenic -106069 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr6-3818 chr6 35376825 35377035 + 7.31 0.000 intron (NM_001171819, intron 2 of 6) AluYf1|SINE|Alu 34372 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr19-5403 chr19 13558002 13558212 + 7.31 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -51628 NM_023035 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr18-2169 chr18 58391352 58391562 + 7.31 0.000 intron (NM_001144965, intron 29 of 30) intron (NM_001144965, intron 29 of 30) -59617 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chrX-1913 chrX 148356024 148356234 + 7.31 0.000 Intergenic Intergenic -144488 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr1-11427 chr1 63814013 63814223 + 7.31 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 40101 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chrX-3491 chrX 39047591 39047801 + 7.31 0.000 Intergenic Intergenic -243813 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr2-7374 chr2 3223080 3223290 + 7.31 0.000 intron (NM_001330531, intron 3 of 7) intron (NM_001330531, intron 3 of 7) -97159 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr6-8402 chr6 150581728 150581938 + 7.31 0.000 Intergenic Intergenic -18052 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr12-2550 chr12 108119414 108119624 + 7.31 0.000 Intergenic MER54B|LTR|ERVL -9769 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr3-7777 chr3 75272932 75273142 + 7.31 0.000 Intergenic Intergenic 58561 NR_039646 100616394 NR_039646 ENSG00000284252 MIR4444-1 MIR4444|hsa-mir-4444-1|miR-4444-1 microRNA 4444-1 ncRNA chr18-1423 chr18 10132235 10132445 + 7.31 0.000 Intergenic Intergenic 218324 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chrX-4135 chrX 27768604 27768814 + 7.31 0.000 Intergenic AluJo|SINE|Alu -39281 NM_182506 139422 Hs.447363 NM_182506 ENSG00000177689 MAGEB10 - MAGE family member B10 protein-coding chr1-5944 chr1 25535192 25535402 + 7.31 0.000 Intergenic Intergenic -8288 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr5-7592 chr5 42724743 42724953 + 7.31 0.000 Intergenic Intergenic -31970 NM_001134848 100129792 Hs.745017 NM_001134848 ENSG00000198865 CCDC152 CH5400 coiled-coil domain containing 152 protein-coding chr10-6521 chr10 68053268 68053478 + 7.31 0.000 intron (NM_001278185, intron 3 of 23) AluJb|SINE|Alu 21910 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr22-3814 chr22 30705749 30705959 + 7.31 0.000 intron (NM_030758, intron 1 of 13) intron (NM_030758, intron 1 of 13) 10980 NM_030758 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr2-7979 chr2 64976518 64976728 + 7.31 0.000 Intergenic Intergenic -11856 NM_001193493 6509 Hs.654352 NM_003038 ENSG00000115902 SLC1A4 ASCT1|SATT|SPATCCM solute carrier family 1 member 4 protein-coding chr2-8545 chr2 132895653 132895863 + 7.31 0.000 intron (NM_207481, intron 8 of 17) MIRb|SINE|MIR -19799 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr12-6411 chr12 77749215 77749425 + 7.31 0.000 Intergenic Intergenic -81574 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr14-3032 chr14 56956006 56956216 + 7.31 0.000 Intergenic Intergenic 142953 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA chr8-6475 chr8 62512309 62512519 + 7.31 0.000 intron (NM_001304533, intron 1 of 6) intron (NM_001304533, intron 1 of 6) 263560 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr3-6279 chr3 71955513 71955723 + 7.31 0.000 Intergenic Intergenic 144837 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr2-5418 chr2 112666701 112666911 + 7.31 0.000 Intergenic Tigger6b|DNA|TcMar-Tigger 20867 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding chr16-5641 chr16 66348524 66348734 + 7.31 0.000 Intergenic L1MA7|LINE|L1 -18062 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr4-4651 chr4 82511291 82511501 + 7.31 0.000 intron (NM_001353454, intron 1 of 7) intron (NM_001353454, intron 1 of 7) 50592 NM_001353455 441027 Hs.507676 NM_001080506 ENSG00000249242 TMEM150C TTN3 transmembrane protein 150C protein-coding chr3-5155 chr3 58487262 58487472 + 7.31 0.000 Intergenic L2b|LINE|L2 -4729 NM_001128214 200845 Hs.13982 NM_153331 ENSG00000168301 KCTD6 KCASH3 potassium channel tetramerization domain containing 6 protein-coding chr14-2401 chr14 55701830 55702040 + 7.31 0.000 Intergenic L2a|LINE|L2 -64310 NR_004844 645683 Hs.663461 NR_004844 ENSG00000177350 RPL13AP3 RPL13A_11_1370 ribosomal protein L13a pseudogene 3 pseudo chr2-10428 chr2 199842202 199842412 + 7.31 0.000 intron (NM_001363886, intron 3 of 4) L2|LINE|L2 8866 NM_001350853 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding chr17-4819 chr17 54872450 54872660 + 7.31 0.000 Intergenic MIRc|SINE|MIR -28136 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr13-3001 chr13 109020278 109020488 + 7.31 0.000 intron (NM_015011, intron 23 of 34) intron (NM_015011, intron 23 of 34) 146920 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr17-6292 chr17 44950016 44950226 + 7.31 0.000 Intergenic AluSc8|SINE|Alu -2348 NM_001264573 146909 Hs.135094 NM_001080443 ENSG00000186185 KIF18B - kinesin family member 18B protein-coding chr6-4524 chr6 38612495 38612705 + 7.31 0.000 intron (NM_001099272, intron 1 of 10) intron (NM_001099272, intron 1 of 10) -16533 NM_152733 114781 Hs.603858 NM_052893 ENSG00000183826 BTBD9 dJ322I12.1 BTB domain containing 9 protein-coding chr6-6727 chr6 1688630 1688840 + 7.31 0.000 intron (NM_001253846, intron 9 of 10) intron (NM_001253846, intron 9 of 10) 78820 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr3-5474 chr3 186857140 186857350 + 7.31 0.000 3' UTR (NM_004797, exon 3 of 3) 3' UTR (NM_004797, exon 3 of 3) 4123 NR_046662 100874095 Hs.638968 NR_046662 ENSG00000226482 ADIPOQ-AS1 - ADIPOQ antisense RNA 1 ncRNA chr9-8459 chr9 123044631 123044841 + 7.31 0.000 intron (NM_012197, intron 13 of 25) intron (NM_012197, intron 13 of 25) 11093 NM_005294 2844 Hs.722039 NM_005294 ENSG00000011454 GPR21 - G protein-coupled receptor 21 protein-coding chr9-7347 chr9 14923702 14923912 + 7.31 0.000 Intergenic MIR3|SINE|MIR -12812 NM_144966 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr13-1731 chr13 100591200 100591410 + 7.31 0.000 Intergenic Intergenic -2513 NM_001195087 87769 Hs.350868 NM_033110 ENSG00000134864 GGACT A2LD1 gamma-glutamylamine cyclotransferase protein-coding chr15-4167 chr15 92734231 92734441 + 7.31 0.000 Intergenic Intergenic -61148 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr3-10784 chr3 158871293 158871503 + 7.31 0.000 Intergenic Intergenic 69344 NR_110328 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr21-1833 chr21 41195696 41195906 + 7.31 0.000 intron (NM_138991, intron 1 of 7) intron (NM_138991, intron 1 of 7) -10562 NR_148920 191585 Hs.472492 NR_148920 ENSG00000280109 PLAC4 C21orf115|PRED78 placenta enriched 4 ncRNA chr10-5700 chr10 100565076 100565286 + 7.31 0.000 Intergenic Intergenic 29238 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr14-3882 chr14 91305960 91306170 + 7.31 0.000 intron (NM_001080414, intron 18 of 29) intron (NM_001080414, intron 18 of 29) -52185 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr11-7013 chr11 117722829 117723039 + 7.31 0.000 intron (NM_020693, intron 3 of 32) L3|LINE|CR1 74282 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr6-5758 chr6 158112111 158112321 + 7.31 0.000 intron (NM_032861, intron 16 of 16) AluJr|SINE|Alu 56046 NM_032861 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr11-7547 chr11 16185079 16185289 + 7.31 0.000 intron (NM_033326, intron 5 of 15) intron (NM_033326, intron 5 of 15) 171362 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr7-4858 chr7 105399312 105399522 + 7.31 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -10027 NM_001350742 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr15-3742 chr15 59612530 59612740 + 7.31 0.000 intron (NM_004751, intron 1 of 2) intron (NM_004751, intron 1 of 2) 852 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr3-5836 chr3 32073048 32073258 + 7.31 0.000 Intergenic HERVH-int|LTR|ERV1 -33358 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chr2-11065 chr2 119275956 119276166 + 7.31 0.000 Intergenic MER83|LTR|ERV1 -26990 NR_046721 100874111 Hs.704682 NR_046721 ENSG00000229867 STEAP3-AS1 - STEAP3 antisense RNA 1 ncRNA chr11-6525 chr11 69138355 69138565 + 7.31 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -17475 NM_001369201 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chr16-4230 chr16 18100378 18100588 + 7.31 0.000 Intergenic Intergenic 232179 NM_001282507 101059938 Hs.634612 NM_001282507 ENSG00000214967 NPIPA7 NPIPA8 nuclear pore complex interacting protein family member A7 protein-coding chr17-6042 chr17 79163113 79163323 + 7.31 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 88281 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr16-6536 chr16 63542498 63542708 + 7.31 0.000 Intergenic L1ME3A|LINE|L1 -1506165 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chrX-2160 chrX 37350257 37350467 + 7.31 0.000 intron (NM_001173490, intron 1 of 3) intron (NM_001173490, intron 1 of 3) 998 NM_000950 5638 Hs.190341 NM_000950 ENSG00000130962 PRRG1 PRGP1 proline rich and Gla domain 1 protein-coding chr16-6356 chr16 50644729 50644939 + 7.31 0.000 3' UTR (NM_033119, exon 10 of 10) 3' UTR (NM_033119, exon 10 of 10) -24021 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr11-4761 chr11 116409693 116409903 + 7.31 0.000 Intergenic MIRb|SINE|MIR -229624 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr7-6333 chr7 145411487 145411697 + 7.31 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -575539 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr10-5322 chr10 71133690 71133900 + 7.31 0.000 Intergenic HAL1|LINE|L1 -78775 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr19-3968 chr19 940960 941170 + 7.31 0.000 intron (NM_005224, intron 3 of 8) (CGCCGC)n|Simple_repeat|Simple_repeat 15030 NM_005224 1820 Hs.501296 NM_005224 ENSG00000116017 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT-rich interaction domain 3A protein-coding chr5-7188 chr5 6453028 6453238 + 7.31 0.000 intron (NM_001145161, intron 1 of 1) intron (NM_001145161, intron 1 of 1) 4274 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr9-8183 chr9 106942001 106942211 + 7.31 0.000 intron (NM_001347997, intron 7 of 12) intron (NM_001347997, intron 7 of 12) 78940 NM_001347997 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chr19-3346 chr19 8596508 8596718 + 7.31 0.000 intron (NM_030957, intron 8 of 25) intron (NM_030957, intron 8 of 25) -4417 NM_001282352 81794 Hs.657508 NM_030957 ENSG00000142303 ADAMTS10 ADAM-TS10|ADAMTS-10|WMS|WMS1 ADAM metallopeptidase with thrombospondin type 1 motif 10 protein-coding chr8-7209 chr8 126379991 126380201 + 7.31 0.000 Intergenic Intergenic 54601 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA chr9-5120 chr9 35996637 35996847 + 7.31 0.000 Intergenic Intergenic -38588 NM_019897 56656 Hs.553540 NM_019897 ENSG00000278889 OR2S2 OR37A|OST715 olfactory receptor family 2 subfamily S member 2 (gene/pseudogene) protein-coding chr1-9776 chr1 56191027 56191237 + 7.31 0.000 Intergenic Intergenic -223831 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr16-1809 chr16 26817158 26817368 + 7.31 0.000 Intergenic L2b|LINE|L2 -249664 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr10-2887 chr10 104058720 104058930 + 7.31 0.000 intron (NM_000494, intron 15 of 55) AluSx3|SINE|Alu -10639 NR_030760 100126326 NR_030760 ENSG00000283788 MIR936 MIRN936|hsa-mir-936 microRNA 936 ncRNA chr13-2843 chr13 108984529 108984739 + 7.31 0.000 intron (NM_015011, intron 20 of 34) intron (NM_015011, intron 20 of 34) 182669 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chrX-4334 chrX 46649940 46650150 + 7.31 0.000 intron (NM_001257291, intron 10 of 16) intron (NM_001257291, intron 10 of 16) 76280 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chr6-2075 chr6 130970487 130970697 + 7.31 0.000 promoter-TSS (NM_001350310) promoter-TSS (NM_001350310) -109 NM_001350302 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr7-6365 chr7 150877102 150877312 + 7.31 0.000 Intergenic Intergenic 24690 NM_001272072 26 Hs.647097 NM_001091 ENSG00000002726 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase copper containing 1 protein-coding chr17-3106 chr17 8740493 8740703 + 7.31 0.000 intron (NM_144681, intron 4 of 6) intron (NM_144681, intron 4 of 6) 4238 NM_144681 146849 Hs.121438 NM_144681 ENSG00000161973 CCDC42 CCDC42A coiled-coil domain containing 42 protein-coding chr5-7406 chr5 25990914 25991124 + 7.31 0.000 Intergenic Intergenic 800066 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chrX-3874 chrX 4037730 4037940 + 7.31 0.000 Intergenic AluJr|SINE|Alu -117093 NR_146579 729162 Hs.657302 NR_146578 FAM239B - zinc finger protein 839 pseudogene pseudo chr16-4707 chr16 81968616 81968826 + 7.31 0.000 Intergenic L1MB1|LINE|L1 42749 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr8-5201 chr8 108539482 108539692 + 7.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 95963 NM_014673 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr15-1373 chr15 89195950 89196160 + 7.31 0.000 3' UTR (NM_152924, exon 11 of 11) 3' UTR (NM_152924, exon 11 of 11) 25524 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chr14-4890 chr14 72130195 72130405 + 7.31 0.000 intron (NM_001370288, intron 2 of 16) MER21C|LTR|ERVL 196773 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr19-2806 chr19 48543303 48543513 + 7.31 0.000 Intergenic Intergenic -8764 NM_177973 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr8-5532 chr8 68218754 68218964 + 7.31 0.000 intron (NM_024870, intron 38 of 39) intron (NM_024870, intron 38 of 39) -111514 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr7-8816 chr7 83793831 83794041 + 7.31 0.000 Intergenic Intergenic -144797 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr3-5625 chr3 10074219 10074429 + 7.31 0.000 intron (NM_001018115, intron 28 of 43) intron (NM_001018115, intron 28 of 43) 33931 NM_173472 115795 Hs.190413 NM_173472 ENSG00000163705 FANCD2OS C3orf24 FANCD2 opposite strand protein-coding chr5-3229 chr5 92601881 92602091 + 7.31 0.000 Intergenic Intergenic 969357 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr2-10011 chr2 25000392 25000602 + 7.31 0.000 intron (NR_034113, intron 1 of 2) intron (NR_034113, intron 1 of 2) 28385 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 - DNAJC27 antisense RNA 1 ncRNA chr1-13494 chr1 3970891 3971101 + 7.31 0.000 Intergenic Intergenic -22016 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr5-8785 chr5 149046620 149046830 + 7.31 0.000 intron (NM_024577, intron 3 of 16) intron (NM_024577, intron 3 of 16) 15684 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr7-9034 chr7 101652886 101653096 + 7.31 0.000 Intergenic HAL1ME|LINE|L1 -23695 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr9-7919 chr9 89443643 89443853 + 7.31 0.000 intron (NM_001371200, intron 2 of 20) intron (NM_001371200, intron 2 of 20) 36142 NR_163888 chr2-9501 chr2 236637261 236637471 + 7.31 0.000 Intergenic Intergenic 67541 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr3-7171 chr3 186882920 186883130 + 7.31 0.000 Intergenic MER44B|DNA|TcMar-Tigger -21657 NR_046662 100874095 Hs.638968 NR_046662 ENSG00000226482 ADIPOQ-AS1 - ADIPOQ antisense RNA 1 ncRNA chr4-6501 chr4 156785567 156785777 + 7.31 0.000 intron (NM_016205, intron 3 of 5) intron (NM_016205, intron 3 of 5) 186127 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr17-6799 chr17 6381827 6382037 + 7.31 0.000 Intergenic Intergenic 53189 NM_001285399 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr22-2835 chr22 43831279 43831489 + 7.31 0.000 intron (NM_014351, intron 5 of 6) intron (NM_014351, intron 5 of 6) -19079 NM_198856 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr22-1949 chr22 48258432 48258642 + 7.31 0.000 Intergenic Intergenic -15827 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr8-2936 chr8 24376405 24376615 + 7.31 0.000 intron (NR_125808, intron 3 of 5) L1MD1|LINE|L1 -7775 NR_156422 27299 Hs.521459 NM_014479 ENSG00000134028 ADAMDEC1 M12.219 ADAM like decysin 1 protein-coding chr1-12959 chr1 153280632 153280842 + 7.31 0.000 Intergenic Intergenic 21050 NM_000427 4014 Hs.251680 NM_000427 ENSG00000203782 LOR - loricrin protein-coding chr7-9514 chr7 138810524 138810734 + 7.31 0.000 Intergenic L1MC1|LINE|L1 -12433 NM_020632 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr2-8639 chr2 145847181 145847391 + 7.31 0.000 Intergenic Intergenic -739771 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr1-10667 chr1 184075525 184075735 + 7.31 0.000 intron (NM_001363643, intron 3 of 3) intron (NM_001363643, intron 3 of 3) 23900 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chrX-1283 chrX 111283447 111283657 + 7.31 0.000 Intergenic Intergenic -13069 NM_014289 827 Hs.496593 NM_014289 ENSG00000077274 CAPN6 CANPX|CAPNX|CalpM|DJ914P14.1 calpain 6 protein-coding chr11-7070 chr11 120909466 120909676 + 7.31 0.000 intron (NM_001282470, intron 12 of 19) intron (NM_001282470, intron 12 of 19) -14774 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr1-14542 chr1 51833708 51833918 + 7.31 0.000 intron (NM_001101662, intron 4 of 30) AluJr|SINE|Alu 2589 NR_031580 100313892 NR_031580 ENSG00000283899 MIR761 hsa-mir-761 microRNA 761 ncRNA chr5-8514 chr5 133892807 133893017 + 7.31 0.000 Intergenic MIRb|SINE|MIR -20765 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr17-6583 chr17 49478874 49479084 + 7.31 0.000 Intergenic Intergenic -16314 NM_002507 4804 Hs.415768 NM_002507 ENSG00000064300 NGFR CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR nerve growth factor receptor protein-coding chr1-10543 chr1 171248342 171248552 + 7.31 0.000 promoter-TSS (NM_001282693) promoter-TSS (NM_001282693) -24 NM_001282694 2326 Hs.1424 NM_002021 ENSG00000010932 FMO1 - flavin containing dimethylaniline monoxygenase 1 protein-coding chr2-11339 chr2 202530113 202530323 + 7.31 0.000 intron (NM_001204, intron 7 of 12) intron (NM_001204, intron 7 of 12) -104751 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr2-10162 chr2 84327223 84327433 + 7.31 0.000 Intergenic Intergenic 36646 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr3-9639 chr3 59955055 59955265 + 7.31 0.000 intron (NM_001320901, intron 5 of 6) MIRb|SINE|MIR 125749 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr10-8960 chr10 118643258 118643468 + 7.31 0.000 Intergenic Intergenic -47715 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chrX-5022 chrX 119473901 119474111 + 7.31 0.000 Intergenic AluSx|SINE|Alu -4886 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr5-6714 chr5 68375083 68375293 + 7.31 0.000 Intergenic Intergenic 82611 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr1-12213 chr1 205054016 205054226 + 7.31 0.000 intron (NM_001346083, intron 2 of 22) intron (NM_001346083, intron 2 of 22) 10909 NR_144350 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr2-14707 chr2 238230263 238230473 + 7.31 0.000 intron (NR_026926, intron 1 of 2) AluJo|SINE|Alu 1309 NR_026926 151174 Hs.424165 NR_026925 ENSG00000186235 LINC02610 - long intergenic non-protein coding RNA 2610 ncRNA chr14-4695 chr14 57571529 57571739 + 7.31 0.000 3' UTR (NM_001352011, exon 5 of 5) 3' UTR (NM_001352011, exon 5 of 5) -77777 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr2-4666 chr2 201628576 201628786 + 7.31 0.000 intron (NM_001044385, intron 8 of 11) MLT1C|LTR|ERVL-MaLR -9503 NM_001168216 151254 Hs.335788 NM_152525 ENSG00000155754 C2CD6 ALS2CR11 C2 calcium dependent domain containing 6 protein-coding chr2-12115 chr2 35284797 35285007 + 7.31 0.000 Intergenic LTR78|LTR|ERV1 -186503 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr20-992 chr20 56630168 56630378 + 7.31 0.000 intron (NM_003222, intron 1 of 6) CpG-17886 967 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr11-9803 chr11 70238777 70238987 + 7.31 0.000 Intergenic MER2B|DNA|TcMar-Tigger -31808 NM_003626 8500 Hs.530749 NM_003626 ENSG00000131626 PPFIA1 LIP.1|LIP1|LIPRIN PTPRF interacting protein alpha 1 protein-coding chr13-2842 chr13 108964169 108964379 + 7.31 0.000 intron (NM_015011, intron 19 of 34) intron (NM_015011, intron 19 of 34) 203029 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr11-10511 chr11 119250883 119251093 + 7.31 0.000 intron (NM_005188, intron 2 of 15) L1MEc|LINE|L1 44712 NM_005188 867 Hs.504096 NM_005188 ENSG00000110395 CBL C-CBL|CBL2|FRA11B|NSLL|RNF55 Cbl proto-oncogene protein-coding chr2-9796 chr2 121699495 121699705 + 7.31 0.000 intron (NR_037857, intron 2 of 3) L2|LINE|L2 37275 NM_032390 84365 Hs.367842 NM_032390 ENSG00000155438 NIFK MKI67IP|Nopp34 nucleolar protein interacting with the FHA domain of MKI67 protein-coding chr12-6175 chr12 13438651 13438861 + 7.31 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -62011 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr7-7224 chr7 22420042 22420252 + 7.31 0.000 intron (NM_207342, intron 4 of 4) intron (NM_207342, intron 4 of 4) -62993 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chrX-1691 chrX 10496340 10496550 + 7.31 0.000 intron (NM_000381, intron 3 of 9) intron (NM_000381, intron 3 of 9) 71158 NM_001193279 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr12-6742 chr12 6346510 6346720 + 7.31 0.000 TTS (NM_001159576) TTS (NM_001159576) -4498 NM_001065 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr9-6221 chr9 113369914 113370124 + 7.31 0.000 exon (NM_001317943, exon 6 of 6) exon (NM_001317943, exon 6 of 6) 6042 NM_031219 81932 Hs.7739 NM_031219 ENSG00000119431 HDHD3 2810435D12Rik|C9orf158 haloacid dehalogenase like hydrolase domain containing 3 protein-coding chr10-6040 chr10 127290783 127290993 + 7.31 0.000 intron (NM_001290223, intron 29 of 51) L1MD2|LINE|L1 -94297 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr14-2117 chr14 74921171 74921381 + 7.31 0.000 intron (NR_163405, intron 3 of 13) intron (NR_163405, intron 3 of 13) 1166 NM_031464 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding chr2-8792 chr2 167475728 167475938 + 7.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 288461 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr2-13628 chr2 159757479 159757689 + 7.31 0.000 intron (NM_001282805, intron 8 of 11) AluJr|SINE|Alu 23620 NM_001282807 64844 Hs.529272 NM_022826 ENSG00000136536 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane associated ring-CH-type finger 7 protein-coding chr18-2439 chr18 26998003 26998213 + 7.31 0.000 intron (NM_031422, intron 4 of 5) L2c|LINE|L2 -132305 NM_001317384 361 Hs.315369 NM_001650 ENSG00000171885 AQP4 MIWC|WCH4 aquaporin 4 protein-coding chrX-5013 chrX 118941658 118941868 + 7.31 0.000 Intergenic L1MB3|LINE|L1 -32851 NR_110311 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr16-1831 chr16 57984861 57985071 + 7.31 0.000 intron (NM_199456, intron 4 of 7) CpG-9766 8531 NM_199046 374739 Hs.132976 NM_199046 ENSG00000159648 TEPP - testis, prostate and placenta expressed protein-coding chr1-13285 chr1 229398227 229398437 + 7.31 0.000 Intergenic L1ME3A|LINE|L1 35764 NM_001100 58 Hs.1288 NM_001100 ENSG00000143632 ACTA1 ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3|SHPM actin alpha 1, skeletal muscle protein-coding chr9-7267 chr9 6123838 6124048 + 7.31 0.000 Intergenic Intergenic -91206 NM_001314047 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chrX-2333 chrX 57282044 57282254 + 7.31 0.000 Intergenic L1PA15|LINE|L1 -4528 NM_174912 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding chr5-3648 chr5 146133724 146133934 + 7.31 0.000 intron (NM_016460, intron 21 of 30) L1MC4a|LINE|L1 -28252 NM_001029869 153770 Hs.162369 NM_001029869 ENSG00000173261 PLAC8L1 - PLAC8 like 1 protein-coding chrX-977 chrX 146150887 146151097 + 7.31 0.000 Intergenic Intergenic -123120 NR_030581 100126341 NR_030581 ENSG00000216056 MIR891A MIRN891A microRNA 891a ncRNA chr15-5194 chr15 94008679 94008889 + 7.31 0.000 intron (NR_120320, intron 2 of 8) intron (NR_120320, intron 2 of 8) 99154 NR_120320 101927112 Hs.134687 NR_120320 ENSG00000259724 LINC01581 - long intergenic non-protein coding RNA 1581 ncRNA chr10-3071 chr10 3482437 3482647 + 7.31 0.000 intron (NR_155743, intron 3 of 4) intron (NR_155743, intron 3 of 4) 20296 NR_155745 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr2-10846 chr2 58626671 58626881 + 7.31 0.000 intron (NR_033873, intron 1 of 13) MLT1J|LTR|ERVL-MaLR 106023 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr11-4638 chr11 27971609 27971819 + 7.31 0.000 Intergenic Intergenic -85101 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr6-5967 chr6 84442454 84442664 + 7.31 0.000 intron (NR_132100, intron 4 of 4) AluJo|SINE|Alu 32370 NR_132100 105377880 Hs.171384 NR_132100 ENSG00000231776 LINC01611 TCONS_l2_00025430 long intergenic non-protein coding RNA 1611 ncRNA chr2-6119 chr2 218033651 218033861 + 7.31 0.000 Intergenic Intergenic -1178 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr2-9269 chr2 221319064 221319274 + 7.31 0.000 Intergenic MIR|SINE|MIR 253135 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr2-13867 chr2 178666250 178666460 + 7.31 0.000 intron (NM_001267550, intron 163 of 362) intron (NM_001267550, intron 163 of 362) -110571 NR_120594 101927055 Hs.570275 NR_120594 ENSG00000237298 LOC101927055 - uncharacterized LOC101927055 ncRNA chr6-8069 chr6 123009047 123009257 + 7.31 0.000 intron (NM_001010852, intron 2 of 5) intron (NM_001010852, intron 2 of 5) 12917 NM_001010852 134829 Hs.486361 NM_001010852 ENSG00000146352 CLVS2 C6orf212|C6orf213|RLBP1L2|bA160A10.4 clavesin 2 protein-coding chr13-3588 chr13 27853645 27853855 + 7.31 0.000 intron (NR_047484, intron 1 of 4) intron (NR_047484, intron 1 of 4) 61267 NM_145657 219409 Hs.351785 NM_145657 ENSG00000169840 GSX1 GSH1|Gsh-1 GS homeobox 1 protein-coding chr5-5595 chr5 150659894 150660104 + 7.31 0.000 promoter-TSS (NM_133371) promoter-TSS (NM_133371) -842 NM_133371 91977 Hs.91626 NM_133371 ENSG00000164591 MYOZ3 CS-3|CS3|FATZ-3|FRP3 myozenin 3 protein-coding chr17-6904 chr17 34425538 34425748 + 7.31 0.000 Intergenic Intergenic -62410 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr2-9349 chr2 227061435 227061645 + 7.31 0.000 intron (NM_000092, intron 26 of 47) intron (NM_000092, intron 26 of 47) 103019 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr5-7582 chr5 42064356 42064566 + 7.31 0.000 Intergenic Intergenic 110884 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA chr4-5598 chr4 644980 645190 + 7.31 0.000 intron (NM_000283, intron 3 of 21) L1MC3|LINE|L1 -8092 NM_001350154 5158 Hs.623810 NM_000283 ENSG00000133256 PDE6B CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1 phosphodiesterase 6B protein-coding chr6-6885 chr6 11804893 11805103 + 7.31 0.000 Intergenic MER4A1_|LTR|ERV1 -25951 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr6-5884 chr6 42661566 42661776 + 7.31 0.000 intron (NM_015255, intron 30 of 46) intron (NM_015255, intron 30 of 46) 60926 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr6-3475 chr6 4668507 4668717 + 7.31 0.000 Intergenic Intergenic -37526 NM_001368125 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chrX-5351 chrX 149030547 149030757 + 7.31 0.000 Intergenic MIR3|SINE|MIR 311561 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr2-5186 chr2 35558898 35559108 + 7.31 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 87598 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr3-4490 chr3 55146488 55146698 + 7.31 0.000 Intergenic Intergenic -31579 NR_147142 105377096 Hs.640507 NR_147142 ENSG00000243572 LINC02017 - long intergenic non-protein coding RNA 2017 ncRNA chr12-4819 chr12 56973087 56973297 + 7.31 0.000 Intergenic L1PA5|LINE|L1 -13818 NM_003708 8608 Hs.134958 NM_003708 ENSG00000139547 RDH16 RODH-4|SDR9C8|hRDH-E retinol dehydrogenase 16 protein-coding chr5-1961 chr5 83474048 83474258 + 7.31 0.000 intron (NM_001164098, intron 1 of 13) CpG 2409 NM_004385 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr4-8306 chr4 143853571 143853781 + 7.31 0.000 Intergenic Intergenic -24328 NR_134680 105377458 Hs.738046 NR_134680 LOC105377458 - uncharacterized LOC105377458 ncRNA chr16-4709 chr16 82062790 82063000 + 7.31 0.000 intron (NM_002153, intron 1 of 4) intron (NM_002153, intron 1 of 4) 27642 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chrX-4874 chrX 106130971 106131181 + 7.31 0.000 Intergenic L1MA2|LINE|L1 -37229 NM_001171020 139221 Hs.592221 NM_152423 ENSG00000157502 PWWP3B MUM1L1 PWWP domain containing 3B protein-coding chr8-3152 chr8 79694993 79695203 + 7.31 0.000 Intergenic Intergenic 71377 NM_001282851 23462 Hs.234434 NM_012258 ENSG00000164683 HEY1 BHLHb31|CHF2|HERP2|HESR1|HRT-1|NERP2|OAF1|hHRT1 hes related family bHLH transcription factor with YRPW motif 1 protein-coding chr11-10154 chr11 92647098 92647308 + 7.31 0.000 intron (NM_001008781, intron 2 of 24) intron (NM_001008781, intron 2 of 24) 268425 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr13-1521 chr13 23866944 23867154 + 7.31 0.000 intron (NM_005932, intron 7 of 18) L2a|LINE|L2 -21819 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr13-3857 chr13 50529260 50529470 + 7.31 0.000 TTS (NR_109974) TTS (NR_109974) -1916 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr7-9374 chr7 130623386 130623596 + 7.31 0.000 intron (NM_001290033, intron 5 of 19) L1MCa|LINE|L1 45257 NM_012133 26958 Hs.6421 NM_012133 ENSG00000158623 COPG2 2-COP|gamma-2-COP coatomer protein complex subunit gamma 2 protein-coding chr11-5744 chr11 2564637 2564847 + 7.31 0.000 intron (NM_181798, intron 2 of 15) L1MB3|LINE|L1 103288 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr5-7071 chr5 172538202 172538412 + 7.31 0.000 Intergenic AluSx|SINE|Alu 20707 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chrX-3323 chrX 123646975 123647185 + 7.31 0.000 intron (NM_001081550, intron 12 of 38) intron (NM_001081550, intron 12 of 38) 85972 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr10-5670 chr10 98383335 98383545 + 7.31 0.000 TTS (NM_032709) TTS (NM_032709) 11867 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr1-15626 chr1 162381180 162381390 + 7.31 0.000 promoter-TSS (NM_001085375) promoter-TSS (NM_001085375) -443 NM_001085375 400793 Hs.447011 NM_001085375 ENSG00000239887 C1orf226 - chromosome 1 open reading frame 226 protein-coding chr4-8412 chr4 152392192 152392402 + 7.31 0.000 intron (NM_033632, intron 2 of 11) MLT1G3|LTR|ERVL-MaLR -9768 NM_001013415 55294 Hs.561245 NM_018315 ENSG00000109670 FBXW7 AGO|CDC4|FBW6|FBW7|FBX30|FBXO30|FBXW6|SEL-10|SEL10|hAgo|hCdc4 F-box and WD repeat domain containing 7 protein-coding chr11-4358 chr11 73936925 73937135 + 7.31 0.000 Intergenic SVA_D|Retroposon|SVA -13289 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr15-2694 chr15 83582144 83582354 + 7.31 0.000 intron (NM_001324185, intron 7 of 9) intron (NM_001324185, intron 7 of 9) -71874 NM_001301110 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr12-5724 chr12 122366942 122367152 + 7.31 0.000 intron (NM_198240, intron 3 of 23) intron (NM_198240, intron 3 of 23) -28495 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chr10-6301 chr10 101536674 101536884 + 7.31 0.000 intron (NM_001256856, intron 11 of 13) intron (NM_001256856, intron 11 of 13) 51478 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr6-8044 chr6 119995831 119996041 + 7.31 0.000 Intergenic L1ME3G|LINE|L1 -19243 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr5-8767 chr5 147895206 147895416 + 7.31 0.000 intron (NM_206966, intron 3 of 3) intron (NM_206966, intron 3 of 3) 11227 NM_206966 389336 Hs.660038 NM_206966 ENSG00000178776 C5orf46 SSSP1 chromosome 5 open reading frame 46 protein-coding chr4-7332 chr4 56603333 56603543 + 7.31 0.000 TTS (NM_001256475) TTS (NM_001256475) 53084 NM_139211 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding chr21-807 chr21 10414414 10414624 + 7.31 0.000 intron (NM_182481, intron 1 of 9) intron (NM_182481, intron 1 of 9) 987 NM_182481 85318 Hs.545789 NM_182481 BAGE3 CT2.3 BAGE family member 3 protein-coding chr9-6798 chr9 34859138 34859348 + 7.31 0.000 Intergenic L1MB4|LINE|L1 -20657 NR_024481 389715 Hs.713965 NM_001126494 FAM205BP C9orf144|C9orf144A|FAM205B transmembrane protein C9orf144B pseudogene pseudo chr20-3931 chr20 33016172 33016382 + 7.31 0.000 intron (NM_025227, intron 6 of 15) intron (NM_025227, intron 6 of 15) 8573 NM_025227 80341 Hs.257045 NM_025227 ENSG00000078898 BPIFB2 BPIL1|C20orf184|LPLUNC2|RYSR|dJ726C3.2 BPI fold containing family B member 2 protein-coding chr17-2192 chr17 75218465 75218675 + 7.31 0.000 intron (NM_001330472, intron 7 of 17) intron (NM_001330472, intron 7 of 17) 12891 NM_024844 79902 Hs.362817 NM_024844 ENSG00000125450 NUP85 FROUNT|NPHS17|Nup75 nucleoporin 85 protein-coding chrX-3722 chrX 118536820 118537030 + 7.31 0.000 intron (NM_144658, intron 1 of 52) intron (NM_144658, intron 1 of 52) 41016 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr5-3815 chr5 95843053 95843263 + 7.31 0.000 intron (NR_157807, intron 2 of 2) intron (NR_157807, intron 2 of 2) 8331 NR_157807 102724720 NR_157807 LOC102724720 - uncharacterized LOC102724720 ncRNA chr19-7044 chr19 51058823 51059033 + 7.31 0.000 intron (NM_001348178, intron 1 of 2) intron (NM_001348178, intron 1 of 2) 5991 NR_145466 26085 Hs.165296 NM_015596 ENSG00000167759 KLK13 KLK-L4|KLKL4 kallikrein related peptidase 13 protein-coding chr4-4041 chr4 2909702 2909912 + 7.31 0.000 intron (NM_001354759, intron 13 of 16) intron (NM_001354759, intron 13 of 16) 24430 NM_001120 10227 Hs.632581 NM_001120 ENSG00000109736 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding chr5-8679 chr5 141493883 141494093 + 7.31 0.000 intron (NM_018929, intron 1 of 3) intron (NM_018929, intron 1 of 3) 4747 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr1-5802 chr1 199403521 199403731 + 7.31 0.000 Intergenic Intergenic 255028 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr14-4889 chr14 72126511 72126721 + 7.31 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 193089 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr10-9205 chr10 132352892 132353102 + 7.31 0.000 3' UTR (NM_001143759, exon 9 of 9) 3' UTR (NM_001143759, exon 9 of 9) 15657 NM_001309474 80313 Hs.119897 NM_030626 ENSG00000148814 LRRC27 - leucine rich repeat containing 27 protein-coding chr4-5309 chr4 179706183 179706393 + 7.31 0.000 Intergenic MSTB|LTR|ERVL-MaLR 1452861 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr18-2089 chr18 49321965 49322175 + 7.31 0.000 intron (NM_001353214, intron 8 of 17) intron (NM_001353214, intron 8 of 17) 138575 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr3-7162 chr3 186480466 186480676 + 7.31 0.000 intron (NR_033844, intron 2 of 7) L1MA4|LINE|L1 13090 NR_033844 253573 Hs.97386 NR_033844 ENSG00000224406 LINC02052 - long intergenic non-protein coding RNA 2052 ncRNA chr11-5294 chr11 44434030 44434240 + 7.31 0.000 Intergenic Intergenic -123996 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr12-5505 chr12 128097273 128097483 + 7.31 0.000 intron (NR_104647, intron 3 of 4) AluSx1|SINE|Alu 20763 NR_104647 100996679 Hs.539127 NR_104647 ENSG00000256551 LINC02369 - long intergenic non-protein coding RNA 2369 ncRNA chr10-2744 chr10 117004974 117005184 + 7.31 0.000 exon (NM_001258299, exon 1 of 17) exon (NM_001258299, exon 1 of 17) 108 NM_018330 57698 Hs.501140 NM_018330 ENSG00000187164 SHTN1 KIAA1598|shootin-1 shootin 1 protein-coding chr12-6805 chr12 11556564 11556774 + 7.31 0.000 non-coding (NR_033890, exon 6 of 8) non-coding (NR_033890, exon 6 of 8) 8639 NR_033890 338817 Hs.733066 NR_033890 ENSG00000247157 LINC01252 - long intergenic non-protein coding RNA 1252 ncRNA chr7-8401 chr7 45522589 45522799 + 7.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -51446 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr8-6063 chr8 25369513 25369723 + 7.31 0.000 exon (NM_024940, exon 34 of 52) exon (NM_024940, exon 34 of 52) -8106 NR_159962 105379331 NR_159962 LOC105379331 - uncharacterized LOC105379331 ncRNA chr15-3769 chr15 64559357 64559567 + 7.31 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 60042 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr18-3128 chr18 38040597 38040807 + 7.31 0.000 Intergenic Intergenic 383567 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr6-6434 chr6 98443675 98443885 + 7.31 0.000 Intergenic LTR16E2|LTR|ERVL 387920 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr5-8190 chr5 105697854 105698064 + 7.31 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 598485 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr10-6175 chr10 13788812 13789022 + 7.31 0.000 intron (NM_001318336, intron 4 of 23) intron (NM_001318336, intron 4 of 23) -81350 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr4-4265 chr4 21936987 21937197 + 7.31 0.000 intron (NM_147182, intron 1 of 8) L2c|LINE|L2 11659 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr2-8320 chr2 107107570 107107780 + 7.31 0.000 Intergenic LTR16A2|LTR|ERVL -220566 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr7-8532 chr7 55276849 55277059 + 7.31 0.000 Intergenic Intergenic -21319 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr5-5022 chr5 84433535 84433745 + 7.31 0.000 Intergenic LTR67B|LTR|ERVL -48760 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr2-9380 chr2 230318434 230318644 + 7.31 0.000 Intergenic L1MEb|LINE|L1 -8632 NM_001308162 93349 Hs.589661 NM_138402 ENSG00000185404 SP140L - SP140 nuclear body protein like protein-coding chr22-2964 chr22 50047425 50047635 + 7.31 0.000 intron (NM_001350317, intron 5 of 13) intron (NM_001350317, intron 5 of 13) 10697 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr15-3170 chr15 68747262 68747472 + 7.31 0.000 Intergenic AluSx|SINE|Alu 54558 NR_036197 100422971 NR_036197 ENSG00000265195 MIR4312 - microRNA 4312 ncRNA chr3-9322 chr3 44942097 44942307 + 7.31 0.000 intron (NR_146162, intron 3 of 6) intron (NR_146162, intron 3 of 6) 33972 NM_001330761 51304 Hs.61430 NM_016598 ENSG00000163812 ZDHHC3 DHHC-3|DHHC3|GODZ|ZNF373 zinc finger DHHC-type containing 3 protein-coding chr8-7168 chr8 123495756 123495966 + 7.31 0.000 Intergenic MER1B|DNA|hAT-Charlie 36282 NM_148177 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr10-8831 chr10 110151595 110151805 + 7.31 0.000 Intergenic Intergenic -55905 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr3-10124 chr3 113215214 113215424 + 7.31 0.000 intron (NM_001301861, intron 1 of 19) intron (NM_001301861, intron 1 of 19) 3203 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr2-12235 chr2 43846436 43846646 + 7.31 0.000 intron (NM_001357321, intron 3 of 12) intron (NM_001357321, intron 3 of 12) 7570 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr12-3890 chr12 119520438 119520648 + 7.31 0.000 intron (NM_178499, intron 9 of 13) AluSz|SINE|Alu -73231 NM_001136534 387890 Hs.530965 NM_001136534 ENSG00000224982 TMEM233 DSPB2|IFITMD2 transmembrane protein 233 protein-coding chr11-6732 chr11 82012293 82012503 + 7.31 0.000 intron (NR_120571, intron 6 of 7) intron (NR_120571, intron 6 of 7) -121562 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr1-15532 chr1 157211234 157211444 + 7.31 0.000 Intergenic L1PA10|LINE|L1 -72748 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr3-6137 chr3 55768993 55769203 + 7.31 0.000 intron (NR_132749, intron 13 of 17) L2b|LINE|L2 83496 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr14-1718 chr14 23420815 23421025 + 7.31 0.000 intron (NM_000257, intron 26 of 39) intron (NM_000257, intron 26 of 39) -2857 NR_030624 100126336 NR_030624 ENSG00000215991 MIR208B MIRN208B|mir-208b microRNA 208b ncRNA chr2-8973 chr2 190413683 190413893 + 7.31 0.000 intron (NM_017694, intron 1 of 7) intron (NM_017694, intron 1 of 7) 5433 NM_017694 54842 Hs.418581 NM_017694 ENSG00000151690 MFSD6 MMR2|hMMR2 major facilitator superfamily domain containing 6 protein-coding chr5-7541 chr5 38330327 38330537 + 7.31 0.000 intron (NM_152403, intron 1 of 21) intron (NM_152403, intron 1 of 21) -39446 NR_046219 100852408 Hs.570954 NR_046219 ENSG00000248730 EGFLAM-AS4 - EGFLAM antisense RNA 4 ncRNA chr3-10773 chr3 157373822 157374032 + 7.31 0.000 intron (NM_024621, intron 7 of 13) intron (NM_024621, intron 7 of 13) -62923 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr10-8411 chr10 84255121 84255331 + 7.31 0.000 intron (NM_001012722, intron 5 of 5) intron (NM_001012722, intron 5 of 5) 10173 NM_001012720 5995 Hs.1544 NM_002921 ENSG00000148604 RGR RP44 retinal G protein coupled receptor protein-coding chr2-14499 chr2 227318928 227319138 + 7.31 0.000 intron (NR_102371, intron 1 of 13) MLT2B2|LTR|ERVL 6131 NR_102371 654841 Hs.659982 NR_102371 ENSG00000236432 LOC654841 - uncharacterized LOC654841 ncRNA chr7-7192 chr7 12611194 12611404 + 7.31 0.000 intron (NR_156701, intron 4 of 14) intron (NR_156701, intron 4 of 14) 21776 NM_033128 85477 Hs.633359 NM_033128 ENSG00000006747 SCIN - scinderin protein-coding chr12-4156 chr12 84135536 84135746 + 7.31 0.000 Intergenic Intergenic 777158 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr11-6099 chr11 34773980 34774190 + 7.31 0.000 Intergenic Intergenic 141519 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr1-13037 chr1 167232041 167232251 + 7.31 0.000 intron (NM_001198786, intron 1 of 14) MER8|DNA|TcMar-Tigger 11260 NM_002697 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chr7-9699 chr7 155182491 155182701 + 7.31 0.000 Intergenic Intergenic -111039 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chr8-6875 chr8 100693688 100693898 + 7.31 0.000 Intergenic L2a|LINE|L2 9231 NR_106992 102466854 NR_106992 ENSG00000284570 MIR7705 hsa-mir-7705 microRNA 7705 ncRNA chr4-5190 chr4 159427078 159427288 + 7.31 0.000 Intergenic AluSz|SINE|Alu 159374 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr3-8996 chr3 17915370 17915580 + 7.31 0.000 Intergenic MER44B|DNA|TcMar-Tigger -47077 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr9-1949 chr9 36036729 36036939 + 7.31 0.000 promoter-TSS (NM_001316346) promoter-TSS (NM_001316346) -79 NM_021111 8434 Hs.388918 NM_021111 ENSG00000122707 RECK ST15 reversion inducing cysteine rich protein with kazal motifs protein-coding chr19-3914 chr19 43777545 43777755 + 7.31 0.000 intron (NM_002250, intron 1 of 8) intron (NM_002250, intron 1 of 8) 3323 NM_002250 3783 Hs.10082 NM_002250 ENSG00000104783 KCNN4 DHS2|IK|IK1|IKCA1|KCA4|KCa3.1|SK4|hIKCa1|hKCa4|hSK4 potassium calcium-activated channel subfamily N member 4 protein-coding chr20-2420 chr20 22654790 22655000 + 7.31 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 30449 NR_146527 105372566 Hs.555065 NR_146527 LINC01747 - long intergenic non-protein coding RNA 1747 ncRNA chrX-4693 chrX 86037430 86037640 + 7.31 0.000 intron (NM_001145414, intron 1 of 4) intron (NM_001145414, intron 1 of 4) 9771 NM_001362518 1121 Hs.496449 NM_000390 ENSG00000188419 CHM DXS540|GGTA|HSD-32|REP-1|TCD CHM Rab escort protein protein-coding chr18-3178 chr18 44033885 44034095 + 7.31 0.000 Intergenic Intergenic 497707 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr3-10135 chr3 113948942 113949152 + 7.31 0.000 intron (NR_135271, intron 2 of 6) intron (NR_135271, intron 2 of 6) 1034 NM_001320468 254887 Hs.21902 NM_173570 ENSG00000184307 ZDHHC23 DHHC-23|NIDD zinc finger DHHC-type containing 23 protein-coding chr7-9656 chr7 151387732 151387942 + 7.31 0.000 intron (NM_001284260, intron 3 of 5) MIRb|SINE|MIR -21324 NR_034013 100131176 Hs.659231 NR_034012 ENSG00000243836 WDR86-AS1 - WDR86 antisense RNA 1 ncRNA chr8-5978 chr8 21769778 21769988 + 7.31 0.000 intron (NM_001165039, intron 1 of 6) intron (NM_001165039, intron 1 of 6) 18992 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr1-14313 chr1 39509485 39509695 + 7.31 0.000 intron (NM_181809, intron 1 of 6) intron (NM_181809, intron 1 of 6) -5276 NR_132962 192217 Hs.472491 NR_132962 ENSG00000237624 OXCT2P1 OXCT2P 3-oxoacid CoA-transferase 2 pseudogene 1 pseudo chrX-2549 chrX 100195825 100196035 + 7.31 0.000 Intergenic Intergenic 214343 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr5-6345 chr5 135873120 135873330 + 7.31 0.000 intron (NR_146141, intron 5 of 8) intron (NR_146141, intron 5 of 8) 22616 NM_000590 3578 Hs.960 NM_000590 ENSG00000145839 IL9 HP40|IL-9|P40 interleukin 9 protein-coding chr8-1477 chr8 28324379 28324589 + 7.31 0.000 intron (NM_006228, intron 1 of 3) intron (NM_006228, intron 1 of 3) 7216 NM_006228 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr7-6613 chr7 104371228 104371438 + 7.31 0.000 intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 42677 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chrY-19 chrY 11318658 11318868 + 7.31 0.000 Intergenic BSR/Beta|Satellite|Satellite 1102827 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr1-13244 chr1 219751233 219751443 + 7.31 0.000 Intergenic Intergenic -138193 NM_001355457 643136 Hs.647764 NM_001085394 ENSG00000215817 ZC3H11B ZC3HDC11B zinc finger CCCH-type containing 11B protein-coding chr1-11384 chr1 47493122 47493332 + 7.31 0.000 Intergenic L2b|LINE|L2 -55910 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr10-8443 chr10 86298461 86298671 + 7.31 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) -33778 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr7-8138 chr7 28152253 28152463 + 7.31 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -28099 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr20-2650 chr20 43950163 43950373 + 7.31 0.000 intron (NM_001098798, intron 1 of 7) intron (NM_001098798, intron 1 of 7) 4372 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr13-3454 chr13 110277129 110277339 + 7.31 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 29923 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr1-5126 chr1 153929202 153929412 + 7.31 0.000 TTS (NM_001367466) TTS (NM_001367466) -6335 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr1-12853 chr1 99361391 99361601 + 7.31 0.000 Intergenic ERVL-E-int|LTR|ERVL 97204 NM_001166252 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chrX-4841 chrX 103486009 103486219 + 7.31 0.000 Intergenic Intergenic 33375 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chrX-2280 chrX 50431768 50431978 + 7.31 0.000 intron (NM_001013742, intron 1 of 27) MIRb|SINE|MIR 38952 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr5-8278 chr5 113124328 113124538 + 7.31 0.000 intron (NM_001085377, intron 5 of 18) intron (NM_001085377, intron 5 of 18) 147635 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr3-9624 chr3 58320902 58321112 + 7.31 0.000 TTS (NM_001348712) TTS (NM_001348712) -11883 NM_001349497 54899 Hs.190544 NM_017771 ENSG00000168297 PXK MONAKA|SLOB PX domain containing serine/threonine kinase like protein-coding chr20-1820 chr20 63408280 63408490 + 7.31 0.000 intron (NM_172107, intron 16 of 16) intron (NM_172107, intron 16 of 16) -46989 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr12-6179 chr12 13800013 13800223 + 7.31 0.000 intron (NM_000834, intron 2 of 12) intron (NM_000834, intron 2 of 12) 180238 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr13-2009 chr13 36166129 36166339 + 7.31 0.000 Intergenic MER5A|DNA|hAT-Charlie -34295 NM_001330072 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr1-15922 chr1 186297529 186297739 + 7.31 0.000 intron (NM_001127710, intron 2 of 9) intron (NM_001127710, intron 2 of 9) 1361 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr1-4602 chr1 150933260 150933470 + 7.31 0.000 intron (NM_001243491, intron 3 of 8) AluSx|SINE|Alu 7002 NM_012432 9869 Hs.643565 NM_012432 ENSG00000143379 SETDB1 ESET|H3-K9-HMTase4|KG1T|KMT1E|TDRD21 SET domain bifurcated histone lysine methyltransferase 1 protein-coding chr5-2011 chr5 17306172 17306382 + 7.31 0.000 Intergenic Intergenic 81033 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LINC02111 - long intergenic non-protein coding RNA 2111 ncRNA chr7-4958 chr7 144785776 144785986 + 7.31 0.000 intron (NM_001350887, intron 1 of 6) intron (NM_001350887, intron 1 of 6) -46983 NM_001350884 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr4-6483 chr4 151934037 151934247 + 7.31 0.000 Intergenic Intergenic -166611 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr14-2448 chr14 76427306 76427516 + 7.31 0.000 intron (NM_004452, intron 3 of 10) intron (NM_004452, intron 3 of 10) 56064 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr3-6432 chr3 102415165 102415375 + 7.31 0.000 Intergenic Intergenic -19745 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr18-2946 chr18 14341644 14341854 + 7.31 0.000 non-coding (NR_026756, exon 4 of 4) non-coding (NR_026756, exon 4 of 4) 4326 NR_026756 284233 Hs.607579 NR_026756 ENSG00000265787 CYP4F35P - cytochrome P450 family 4 subfamily F member 35, pseudogene pseudo chr2-13738 chr2 168466995 168467205 + 7.31 0.000 intron (NM_001256126, intron 1 of 10) intron (NM_001256126, intron 1 of 10) 10828 NM_001256126 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr8-7101 chr8 118505668 118505878 + 7.31 0.000 intron (NM_001101676, intron 2 of 4) intron (NM_001101676, intron 2 of 4) -115228 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chrX-4083 chrX 22935992 22936202 + 7.31 0.000 intron (NR_073010, intron 3 of 11) L2c|LINE|L2 -63863 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr11-9149 chr11 34280512 34280722 + 7.31 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 77393 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr4-5343 chr4 183859516 183859726 + 7.31 0.000 intron (NR_132761, intron 1 of 2) intron (NR_132761, intron 1 of 2) -45686 NM_020225 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr12-6955 chr12 26961974 26962184 + 7.31 0.000 intron (NM_015633, intron 5 of 6) MER3|DNA|hAT-Charlie 23609 NM_015633 26127 Hs.591162 NM_015633 ENSG00000111790 FGFR1OP2 HSPC123-like|WIT3.0 FGFR1 oncogene partner 2 protein-coding chr5-6380 chr5 139840356 139840566 + 7.31 0.000 intron (NM_032289, intron 14 of 14) L1ME3G|LINE|L1 44653 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chrX-5267 chrX 139385910 139386120 + 7.31 0.000 Intergenic Intergenic -60804 NR_028597 6719 Hs.730315 NR_028597 SRD5A1P1 SRD5AP1 steroid 5 alpha-reductase 1 pseudogene 1 pseudo chr2-7401 chr2 8543619 8543829 + 7.31 0.000 Intergenic Intergenic 40068 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr13-3324 chr13 60050492 60050702 + 7.31 0.000 intron (NM_001258367, intron 2 of 25) MER58C|DNA|hAT-Charlie 37294 NR_051994 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr1-6671 chr1 50977343 50977553 + 7.31 0.000 Intergenic Intergenic 7203 NM_078626 1031 Hs.525324 NM_001262 ENSG00000123080 CDKN2C INK4C|p18|p18-INK4C cyclin dependent kinase inhibitor 2C protein-coding chr13-2676 chr13 85932681 85932891 + 7.31 0.000 Intergenic L1PA13|LINE|L1 -133367 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr6-7752 chr6 93016819 93017029 + 7.31 0.000 Intergenic L1PA15-16|LINE|L1 402635 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr10-2477 chr10 29064333 29064543 + 7.31 0.000 Intergenic Intergenic 218030 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr15-5121 chr15 89759281 89759491 + 7.31 0.000 Intergenic MIRb|SINE|MIR -8077 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr1-11190 chr1 241604118 241604328 + 7.31 0.000 intron (NM_014322, intron 2 of 3) intron (NM_014322, intron 2 of 3) 31707 NM_001821 1122 Hs.654545 NM_001821 ENSG00000203668 CHML REP2 CHM like Rab escort protein protein-coding chr6-7410 chr6 52343178 52343388 + 7.31 0.000 Intergenic Intergenic -18868 NM_133367 85315 Hs.239388 NM_133367 ENSG00000170915 PAQR8 C6orf33|LMPB1|MPRB progestin and adipoQ receptor family member 8 protein-coding chr11-6157 chr11 43993617 43993827 + 7.31 0.000 Intergenic Intergenic 51085 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr9-2614 chr9 14315193 14315403 + 7.31 0.000 promoter-TSS (NR_161382) promoter-TSS (NR_161382) -344 NR_161382 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chrX-2887 chrX 148788493 148788703 + 7.31 0.000 intron (NM_001170628, intron 1 of 17) intron (NM_001170628, intron 1 of 17) 69507 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr11-9640 chr11 66520212 66520422 + 7.31 0.000 TTS (NM_001348571) TTS (NM_001348571) 9682 NM_024649 582 Hs.502915 NM_024649 ENSG00000174483 BBS1 BBS2L2 Bardet-Biedl syndrome 1 protein-coding chr2-11994 chr2 27737496 27737706 + 7.31 0.000 intron (NR_160725, intron 2 of 2) MIR1_Amn|SINE|MIR 21478 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr6-8274 chr6 140643664 140643874 + 7.31 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -40045 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr13-3765 chr13 43572415 43572625 + 7.31 0.000 intron (NM_001347965, intron 1 of 15) intron (NM_001347965, intron 1 of 15) 56957 NM_001127615 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr10-7497 chr10 12143056 12143266 + 7.31 0.000 exon (NM_001142628, exon 3 of 11) exon (NM_001142628, exon 3 of 11) -12345 NR_039699 100616488 NR_039699 ENSG00000265653 MIR548AK - microRNA 548ak ncRNA chr2-12059 chr2 31170682 31170892 + 7.31 0.000 Intergenic L2c|LINE|L2 -32347 NM_001329096 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr12-6938 chr12 25904470 25904680 + 7.31 0.000 Intergenic LTR16|LTR|ERVL -30496 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chrX-3624 chrX 87075609 87075819 + 7.31 0.000 Intergenic AluSz6|SINE|Alu -442088 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr10-6488 chr10 48870166 48870376 + 7.31 0.000 intron (NM_020945, intron 40 of 61) AluJr4|SINE|Alu 43964 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr9-4102 chr9 130638851 130639061 + 7.31 0.000 TTS (NM_003934) TTS (NM_003934) 12659 NR_106915 102465515 NR_106915 ENSG00000277713 MIR6856 hsa-mir-6856 microRNA 6856 ncRNA chr7-9124 chr7 108026908 108027118 + 7.31 0.000 intron (NM_001318046, intron 33 of 33) intron (NM_001318046, intron 33 of 33) -23852 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr2-6776 chr2 46029871 46030081 + 7.31 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -267431 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr10-3917 chr10 77187226 77187436 + 7.31 0.000 intron (NM_001271519, intron 3 of 28) intron (NM_001271519, intron 3 of 28) 46500 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr3-11244 chr3 196624570 196624780 + 7.31 0.000 Intergenic L3|LINE|CR1 7912 NR_132101 101929769 Hs.518527 NR_132101 ENSG00000232065 LINC01063 - long intergenic non-protein coding RNA 1063 ncRNA chr15-3907 chr15 26088019 26088229 + 7.31 0.000 Intergenic MER57B1|LTR|ERV1 -27689 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr15-2629 chr15 68487669 68487879 + 7.31 0.000 Intergenic Intergenic -30599 NM_001324014 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr2-12103 chr2 34136508 34136718 + 7.31 0.000 intron (NR_126403, intron 4 of 5) intron (NR_126403, intron 4 of 5) 69387 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr1-14220 chr1 35633819 35634029 + 7.31 0.000 intron (NM_002794, intron 2 of 5) intron (NM_002794, intron 2 of 5) -2387 NM_001199780 5690 Hs.471441 NM_002794 ENSG00000126067 PSMB2 HC7-I proteasome subunit beta 2 protein-coding chr22-2682 chr22 37115137 37115347 + 7.31 0.000 Intergenic Intergenic -5529 NM_001289000 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr4-8167 chr4 129807172 129807382 + 7.31 0.000 intron (NR_151713, intron 4 of 16) L2c|LINE|L2 35658 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr19-3273 chr19 3026308 3026518 + 7.31 0.000 intron (NM_001300846, intron 4 of 19) AluSq2|SINE|Alu 2867 NM_001300846 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr4-7850 chr4 102429584 102429794 + 7.31 0.000 intron (NR_136202, intron 2 of 4) L2|LINE|L2 -71670 NM_003998 4790 Hs.618430 NM_003998 ENSG00000109320 NFKB1 CVID12|EBP-1|KBF1|NF-kB1|NF-kappa-B1|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor kappa B subunit 1 protein-coding chr9-2784 chr9 113684311 113684521 + 7.31 0.000 Intergenic Intergenic 90287 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr20-3921 chr20 32668939 32669149 + 7.31 0.000 intron (NM_182584, intron 1 of 5) intron (NM_182584, intron 1 of 5) 4897 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr7-9299 chr7 127471261 127471471 + 7.31 0.000 Intergenic L2|LINE|L2 -5517 NR_110024 100506682 Hs.148450 NR_110024 ENSG00000226770 LOC100506682 - uncharacterized LOC100506682 ncRNA chr7-3660 chr7 44727589 44727799 + 7.31 0.000 Intergenic L1M4|LINE|L1 -20872 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr8-6571 chr8 69935553 69935763 + 7.31 0.000 Intergenic AluSx1|SINE|Alu -100680 NM_030958 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr15-3503 chr15 98939556 98939766 + 7.31 0.000 intron (NM_000875, intron 18 of 20) intron (NM_000875, intron 18 of 20) 65995 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr6-7168 chr6 37564466 37564676 + 7.31 0.000 Intergenic L2c|LINE|L2 -9149 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr5-4955 chr5 77596948 77597158 + 7.31 0.000 Intergenic AluJb|SINE|Alu 41644 NM_032109 23440 Hs.202247 NM_032109 ENSG00000171540 OTP - orthopedia homeobox protein-coding chr4-5083 chr4 146772794 146773004 + 7.31 0.000 intron (NR_133922, intron 12 of 13) L1PA15|LINE|L1 134006 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr6-4730 chr6 65064528 65064738 + 7.31 0.000 intron (NM_001292009, intron 12 of 43) intron (NM_001292009, intron 12 of 43) -236785 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr10-6371 chr10 133041149 133041359 + 7.31 0.000 Intergenic Intergenic 45443 NR_111905 100128127 Hs.694139 NR_111905 ADGRA1-AS1 GPR123-AS1 adhesion G protein-coupled receptor A1 antisense RNA 1 ncRNA chr2-10832 chr2 54680491 54680701 + 7.31 0.000 Intergenic Intergenic -44416 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr2-13070 chr2 110733564 110733774 + 7.31 0.000 intron (NM_001371254, intron 1 of 18) intron (NM_001371254, intron 1 of 18) 1096 NM_001371254 chr1-13626 chr1 10057386 10057596 + 7.31 0.000 intron (NM_006048, intron 1 of 26) AluJo|SINE|Alu 24533 NM_006048 10277 Hs.593974 NM_006048 ENSG00000130939 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding chr14-4985 chr14 75886674 75886884 + 7.31 0.000 intron (NM_015072, intron 30 of 31) intron (NM_015072, intron 30 of 31) 95216 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr12-8136 chr12 120595443 120595653 + 7.31 0.000 Intergenic AluSx|SINE|Alu -14146 NM_015918 51367 Hs.279913 NM_015918 ENSG00000167272 POP5 HSPC004|RPP2|RPP20|hPop5 POP5 homolog, ribonuclease P/MRP subunit protein-coding chr5-5110 chr5 101095283 101095493 + 7.31 0.000 Intergenic L1ME2|LINE|L1 -192106 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr7-4560 chr7 5605111 5605321 + 7.31 0.000 intron (NM_003088, intron 4 of 4) intron (NM_003088, intron 4 of 4) 12400 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr5-9163 chr5 177333466 177333676 + 7.31 0.000 intron (NM_006816, intron 7 of 7) Charlie8|DNA|hAT-Charlie 18097 NM_006816 10960 Hs.75864 NM_006816 ENSG00000169223 LMAN2 C5orf8|GP36B|VIP36 lectin, mannose binding 2 protein-coding chr3-11145 chr3 188557698 188557908 + 7.31 0.000 intron (NM_001167672, intron 4 of 9) intron (NM_001167672, intron 4 of 9) 10863 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr11-8107 chr11 44457120 44457330 + 7.31 0.000 Intergenic MIR3|SINE|MIR -108438 NM_001024844 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr18-2264 chr18 73691026 73691236 + 7.31 0.000 Intergenic Intergenic 366190 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr5-3998 chr5 19782931 19783141 + 7.31 0.000 intron (NM_001349559, intron 3 of 12) intron (NM_001349559, intron 3 of 12) 103236 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr14-3097 chr14 64686924 64687134 + 7.31 0.000 Intergenic AluSx|SINE|Alu -17395 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr12-2590 chr12 117686113 117686323 + 7.31 0.000 intron (NM_173598, intron 4 of 19) (T)n|Simple_repeat|Simple_repeat 282772 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr10-7689 chr10 29470003 29470213 + 7.31 0.000 TTS (NR_110925) TTS (NR_110925) 59865 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr12-2894 chr12 47954012 47954222 + 7.31 0.000 Intergenic Intergenic -9430 NM_024056 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr6-2264 chr6 66973465 66973675 + 7.31 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat -1081781 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr4-5006 chr4 138743370 138743580 + 7.31 0.000 Intergenic Intergenic 269171 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr8-6048 chr8 24644082 24644292 + 7.31 0.000 Intergenic Intergenic -95569 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr4-6275 chr4 79133061 79133271 + 7.31 0.000 intron (NR_038342, intron 3 of 5) MIRb|SINE|MIR 161418 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA chr18-1154 chr18 11529282 11529492 + 7.31 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 39339 NR_110778 101927433 Hs.331210 NR_110778 ENSG00000267252 LINC01255 - long intergenic non-protein coding RNA 1255 ncRNA chr8-5367 chr8 21286259 21286469 + 7.31 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -11875 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA chr17-5658 chr17 50128746 50128956 + 7.31 0.000 intron (NM_174920, intron 1 of 10) intron (NM_174920, intron 1 of 10) 1309 NM_174920 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr19-6800 chr19 41719171 41719381 + 7.31 0.000 intron (NM_001308398, intron 6 of 8) L1MB3|LINE|L1 10650 NM_001291484 1048 Hs.709196 NM_004363 ENSG00000105388 CEACAM5 CD66e|CEA carcinoembryonic antigen related cell adhesion molecule 5 protein-coding chr12-7743 chr12 93814480 93814690 + 7.31 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -76762 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr10-5575 chr10 90055227 90055437 + 7.31 0.000 Intergenic Intergenic -97959 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr22-3225 chr22 40739494 40739704 + 7.31 0.000 Intergenic Intergenic 60421 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr12-4183 chr12 93087440 93087650 + 7.31 0.000 intron (NR_040096, intron 3 of 4) MER110|LTR|ERV1 -86821 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr8-6504 chr8 65529813 65530023 + 7.31 0.000 intron (NR_033893, intron 4 of 4) intron (NR_033893, intron 4 of 4) 32748 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr18-3304 chr18 54549546 54549756 + 7.31 0.000 Intergenic Intergenic -38108 NM_001307955 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr2-11110 chr2 131147171 131147381 + 7.31 0.000 3' UTR (NM_001267063, exon 9 of 9) 3' UTR (NM_001267063, exon 9 of 9) 42429 NM_001267064 55041 Hs.469944 NM_017958 ENSG00000115762 PLEKHB2 EVT2 pleckstrin homology domain containing B2 protein-coding chrX-4101 chrX 24216642 24216852 + 7.31 0.000 TTS (NM_001178085) TTS (NM_001178085) 67018 NM_001178084 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr1-6480 chr1 21386145 21386355 + 7.31 0.000 Intergenic AluY|SINE|Alu -40746 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr7-9651 chr7 151293982 151294192 + 7.31 0.000 Intergenic ERVL-E-int|LTR|ERVL -16938 NM_003078 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr2-13935 chr2 184460561 184460771 + 7.31 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 81691 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chrX-4652 chrX 80178978 80179188 + 7.31 0.000 Intergenic MER66-int|LTR|ERV1 156023 NM_001303475 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr5-5610 chr5 152499483 152499693 + 7.31 0.000 Intergenic MER61A|LTR|ERV1 -94309 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr7-8508 chr7 53804988 53805198 + 7.31 0.000 intron (NR_038371, intron 1 of 5) L1M4b|LINE|L1 6838 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr3-3361 chr3 37606830 37607040 + 7.31 0.000 intron (NM_002207, intron 15 of 27) intron (NM_002207, intron 15 of 27) 154794 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr10-5266 chr10 68048480 68048690 + 7.31 0.000 intron (NM_001278185, intron 3 of 23) L1MC1|LINE|L1 26698 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr7-7285 chr7 37841020 37841230 + 7.31 0.000 Intergenic L1PA6|LINE|L1 -7472 NM_016616 51314 Hs.723454 NM_016616 ENSG00000086288 NME8 CILD6|HEL-S-99|NM23-H8|SPTRX2|TXNDC3|sptrx-2 NME/NM23 family member 8 protein-coding chr3-6523 chr3 115512633 115512843 + 7.31 0.000 Intergenic Intergenic -110772 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr12-4728 chr12 51361665 51361875 + 7.31 0.000 intron (NM_007210, intron 6 of 11) intron (NM_007210, intron 6 of 11) -15091 NM_001971 1990 Hs.348395 NM_001971 ENSG00000139610 CELA1 ELA1 chymotrypsin like elastase 1 protein-coding chr11-8887 chr11 15062665 15062875 + 7.31 0.000 Intergenic Intergenic -10823 NM_000728 797 Hs.534305 NM_000728 ENSG00000175868 CALCB CALC2|CGRP-II|CGRP2 calcitonin related polypeptide beta protein-coding chr13-3874 chr13 51313166 51313376 + 7.31 0.000 Intergenic Intergenic -27761 NM_001101320 647174 Hs.685891 NM_001101320 ENSG00000253309 SERPINE3 - serpin family E member 3 protein-coding chr3-5318 chr3 127554988 127555198 + 7.31 0.000 Intergenic Intergenic -17313 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr22-3901 chr22 36097690 36097900 + 7.31 0.000 Intergenic L1MB7|LINE|L1 62960 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr4-8718 chr4 183326947 183327157 + 7.31 0.000 Intergenic Intergenic -4626 NM_001185149 100132463 Hs.727475 NM_001185149 ENSG00000185758 CLDN24 CLDN21 claudin 24 protein-coding chr1-15744 chr1 171827153 171827363 + 7.31 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -14240 NM_001350206 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chrX-5321 chrX 145584130 145584340 + 7.31 0.000 Intergenic Intergenic -233594 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr4-3738 chr4 78380364 78380574 + 7.31 0.000 intron (NM_001166133, intron 27 of 41) Tigger19a|DNA|TcMar-Tigger 91484 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr15-3028 chr15 58269990 58270200 + 7.31 0.000 Intergenic LTR41B|LTR|ERVL 131714 NM_001320635 366 Hs.104624 NM_020980 ENSG00000103569 AQP9 AQP-9|HsT17287|SSC1|T17287 aquaporin 9 protein-coding chr13-1671 chr13 75680327 75680537 + 7.31 0.000 intron (NM_001306080, intron 1 of 30) L1PA10|LINE|L1 44102 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr1-8686 chr1 216625510 216625720 + 7.31 0.000 intron (NM_001243505, intron 3 of 6) MIR|SINE|MIR 97814 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr4-7928 chr4 108376893 108377103 + 7.31 0.000 Intergenic Intergenic -180235 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chr6-7875 chr6 107101169 107101379 + 7.31 0.000 intron (NM_001367314, intron 1 of 3) intron (NM_001367314, intron 1 of 3) 13158 NM_001080450 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr1-7787 chr1 45348122 45348332 + 7.31 0.000 intron (NM_007170, intron 5 of 10) L2a|LINE|L2 -7757 NR_146882 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr12-2384 chr12 26678928 26679138 + 7.31 0.000 intron (NM_002223, intron 13 of 56) intron (NM_002223, intron 13 of 56) 154161 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr12-7333 chr12 55257440 55257650 + 7.31 0.000 Intergenic HERVL40-int|LTR|ERVL 10257 NM_001005490 254783 Hs.554556 NM_001005490 ENSG00000197706 OR6C74 - olfactory receptor family 6 subfamily C member 74 protein-coding chr11-4248 chr11 65145396 65145606 + 7.31 0.000 Intergenic Intergenic -10982 NM_032431 84447 Hs.75859 NM_032431 ENSG00000162298 SYVN1 DER3|HRD1 synoviolin 1 protein-coding chr9-4953 chr9 16143444 16143654 + 7.31 0.000 Intergenic Intergenic 109558 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr12-6208 chr12 24197861 24198071 + 7.31 0.000 intron (NM_152989, intron 4 of 17) MIR|SINE|MIR -14455 NR_030625 100126320 NR_030625 ENSG00000216192 MIR920 MIRN920|hsa-mir-920 microRNA 920 ncRNA chr2-9302 chr2 223007399 223007609 + 7.31 0.000 Intergenic Intergenic -44426 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr5-7507 chr5 35838624 35838834 + 7.31 0.000 Intergenic Intergenic -18162 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr16-6131 chr16 19844972 19845182 + 7.31 0.000 intron (NR_130968, intron 8 of 8) AluJb|SINE|Alu 39771 NM_016235 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chr2-10399 chr2 185339567 185339777 + 7.31 0.000 Intergenic Intergenic -172600 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA chr20-1548 chr20 58553446 58553656 + 7.31 0.000 intron (NR_034147, intron 6 of 6) L2c|LINE|L2 -38152 NM_153360 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding chr5-4719 chr5 42691559 42691769 + 7.31 0.000 intron (NM_001242403, intron 4 of 9) intron (NM_001242403, intron 4 of 9) -65154 NM_001134848 100129792 Hs.745017 NM_001134848 ENSG00000198865 CCDC152 CH5400 coiled-coil domain containing 152 protein-coding chr5-5632 chr5 155021307 155021517 + 7.31 0.000 Intergenic LTR84b|LTR|ERVL 7657 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr9-4287 chr9 113002842 113003052 + 7.31 0.000 intron (NM_001101338, intron 2 of 4) MLT1A1|LTR|ERVL-MaLR 9245 NM_001101338 169834 Hs.192877 NM_001101338 ENSG00000285447 ZNF883 - zinc finger protein 883 protein-coding chr22-2794 chr22 42498966 42499176 + 7.31 0.000 Intergenic MER11D|LTR|ERVK -1508 NR_027786 94009 Hs.360940 NM_170694 ENSG00000172250 SERHL BK126B4.1|BK126B4.2|HS126B42|dJ222E13.1 serine hydrolase like (pseudogene) pseudo chr10-5173 chr10 58666211 58666421 + 7.31 0.000 intron (NM_001080512, intron 2 of 20) MER57A1|LTR|ERV1 -48699 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr19-4778 chr19 33067551 33067761 + 7.31 0.000 Intergenic MIR3|SINE|MIR -2768 NM_033103 85415 Hs.466435 NM_033103 ENSG00000131941 RHPN2 P76RBE|RHOBP rhophilin Rho GTPase binding protein 2 protein-coding chr10-4093 chr10 59244563 59244773 + 7.31 0.000 intron (NM_001143774, intron 4 of 4) intron (NM_001143774, intron 4 of 4) 67201 NM_001143774 84457 Hs.499704 NM_032439 ENSG00000165443 PHYHIPL - phytanoyl-CoA 2-hydroxylase interacting protein like protein-coding chr18-3206 chr18 46448994 46449204 + 7.31 0.000 intron (NM_152470, intron 4 of 7) MIR|SINE|MIR 69987 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr1-10027 chr1 87515836 87516046 + 7.31 0.000 Intergenic Intergenic -144286 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr1-13121 chr1 195932988 195933198 + 7.31 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 155622 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr6-7874 chr6 107099503 107099713 + 7.31 0.000 intron (NM_001367314, intron 1 of 3) intron (NM_001367314, intron 1 of 3) 14824 NM_001080450 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr22-3204 chr22 37713247 37713457 + 7.31 0.000 exon (NM_001039141, exon 5 of 24) exon (NM_001039141, exon 5 of 24) 16304 NM_001039141 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr20-1635 chr20 18073002 18073212 + 7.31 0.000 Intergenic MLT2B3|LTR|ERVL -13919 NM_001303462 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr2-11509 chr2 237279136 237279346 + 7.31 0.000 Intergenic Intergenic 134923 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr19-2742 chr19 38574874 38575084 + 7.31 0.000 intron (NM_001042723, intron 95 of 104) AluY|SINE|Alu -21368 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr2-8034 chr2 71092446 71092656 + 7.31 0.000 Intergenic LTR12C|LTR|ERV1 23903 NM_001365466 55577 Hs.7036 NM_017567 ENSG00000124357 NAGK GNK|HSA242910 N-acetylglucosamine kinase protein-coding chr7-3570 chr7 22001402 22001612 + 7.31 0.000 Intergenic Intergenic -55608 NM_001127370 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr12-7431 chr12 60739170 60739380 + 7.31 0.000 Intergenic THE1C|LTR|ERVL-MaLR 1049905 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr3-10703 chr3 152516160 152516370 + 7.31 0.000 Intergenic Intergenic -175275 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr18-1322 chr18 74907665 74907875 + 7.31 0.000 intron (NM_017757, intron 6 of 7) L1ME3G|LINE|L1 276807 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr1-9185 chr1 21337176 21337386 + 7.31 0.000 intron (NM_001113348, intron 1 of 18) L1ME2|LINE|L1 8223 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr18-2813 chr18 5102683 5102893 + 7.31 0.000 Intergenic Intergenic 21606 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA chr15-3607 chr15 64884216 64884426 + 7.31 0.000 Intergenic Intergenic -27581 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr11-5968 chr11 18117583 18117793 + 7.31 0.000 Intergenic LTR84b|LTR|ERVL -1556 NR_026576 6290 Hs.454496 NR_026576 ENSG00000166787 SAA3P SAA3 serum amyloid A3, pseudogene pseudo chr6-6405 chr6 83679568 83679778 + 7.31 0.000 intron (NM_001256717, intron 4 of 29) intron (NM_001256717, intron 4 of 29) 28886 NM_001363677 9892 Hs.368046 NM_014841 ENSG00000065609 SNAP91 AP180|CALM synaptosome associated protein 91 protein-coding chr21-1687 chr21 29084640 29084850 + 7.31 0.000 intron (NM_001371374, intron 2 of 11) intron (NM_001371374, intron 2 of 11) -7509 NM_001286619 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr7-8780 chr7 80740621 80740831 + 7.31 0.000 Intergenic Intergenic 94073 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr2-6863 chr2 74670395 74670605 + 7.31 0.000 intron (NM_001271662, intron 4 of 12) intron (NM_001271662, intron 4 of 12) 16253 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr7-9430 chr7 133663124 133663334 + 7.31 0.000 intron (NM_021807, intron 10 of 17) L2a|LINE|L2 161659 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr9-7141 chr9 132888403 132888613 + 7.31 0.000 non-coding (NR_133631, exon 3 of 3) non-coding (NR_133631, exon 3 of 3) 9610 NM_001316897 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr13-2599 chr13 73809638 73809848 + 7.31 0.000 intron (NM_007249, intron 5 of 7) intron (NM_007249, intron 5 of 7) 245499 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr1-6548 chr1 30698315 30698525 + 7.31 0.000 Intergenic Intergenic -20352 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr3-9721 chr3 66938374 66938584 + 7.31 0.000 Intergenic Intergenic -59828 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr2-6862 chr2 74479004 74479214 + 7.31 0.000 intron (NM_001365575, intron 5 of 8) AluJb|SINE|Alu 3889 NM_001365575 84865 Hs.430199 NM_032779 ENSG00000135637 CCDC142 - coiled-coil domain containing 142 protein-coding chr13-2364 chr13 39069594 39069804 + 7.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR 31243 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr6-5703 chr6 130793567 130793777 + 7.31 0.000 Intergenic Intergenic -33733 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr3-9909 chr3 86088387 86088597 + 7.31 0.000 Intergenic THE1B|LTR|ERVL-MaLR -260442 NR_046752 100874037 Hs.570566 NR_046752 ENSG00000241648 CADM2-AS2 - CADM2 antisense RNA 2 ncRNA chr9-1776 chr9 134871907 134872117 + 7.31 0.000 intron (NR_103451, intron 1 of 1) L1ME1|LINE|L1 606 NR_103451 101448202 Hs.679677 NR_103451 LOC101448202 - uncharacterized LOC101448202 ncRNA chr16-3533 chr16 31112318 31112528 + 7.31 0.000 3' UTR (NM_001271926, exon 10 of 10) 3' UTR (NM_001271926, exon 10 of 10) 4037 NM_001271926 10295 Hs.513520 NM_005881 ENSG00000103507 BCKDK BCKDKD|BDK branched chain keto acid dehydrogenase kinase protein-coding chr10-7623 chr10 22438013 22438223 + 7.31 0.000 promoter-TSS (NR_036533) promoter-TSS (NR_036533) -189 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr12-7115 chr12 46206572 46206782 + 7.31 0.000 intron (NM_030674, intron 8 of 16) intron (NM_030674, intron 8 of 16) 59839 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr3-3797 chr3 14627097 14627307 + 7.31 0.000 Intergenic Intergenic -24544 NR_135523 51244 Hs.517820 NM_016474 ENSG00000154781 CCDC174 C3orf19|HSPC212|IHPM|IHPMR coiled-coil domain containing 174 protein-coding chr7-8795 chr7 82336714 82336924 + 7.31 0.000 intron (NM_000722, intron 2 of 38) intron (NM_000722, intron 2 of 38) 106958 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr22-2000 chr22 27556784 27556994 + 7.31 0.000 Intergenic Intergenic 244867 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr3-8063 chr3 8315736 8315946 + 7.31 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 185817 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chrX-1163 chrX 46395275 46395485 + 7.31 0.000 Intergenic SVA_D|Retroposon|SVA -51809 NM_001129900 55634 Hs.632800 NM_017776 ENSG00000147121 KRBOX4 ZNF673 KRAB box domain containing 4 protein-coding chr11-8545 chr11 131760044 131760254 + 7.31 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -96593 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr1-15713 chr1 169933919 169934129 + 7.31 0.000 intron (NM_014970, intron 19 of 19) intron (NM_014970, intron 19 of 19) -40065 NM_181093 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr2-11166 chr2 149352921 149353131 + 7.31 0.000 intron (NM_194317, intron 1 of 4) intron (NM_194317, intron 1 of 4) 22439 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr7-7912 chr7 7078936 7079146 + 7.31 0.000 non-coding (NR_034022, exon 1 of 1) non-coding (NR_034022, exon 1 of 1) -11996 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr12-5512 chr12 130054076 130054286 + 7.31 0.000 Intergenic Intergenic -11839 NR_024457 100190940 Hs.625993 NR_024457 ENSG00000214039 LINC02418 - long intergenic non-protein coding RNA 2418 ncRNA chr3-7657 chr3 35458678 35458888 + 7.31 0.000 Intergenic L1PA14|LINE|L1 -64760 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr13-3165 chr13 103964838 103965048 + 7.31 0.000 Intergenic Intergenic 539743 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr2-13513 chr2 150705020 150705230 + 7.31 0.000 Intergenic Charlie24|DNA|hAT-Charlie 76228 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr3-10129 chr3 113532849 113533059 + 7.31 0.000 non-coding (NR_136283, exon 1 of 24) non-coding (NR_136283, exon 1 of 24) 399 NM_001322297 54847 Hs.591291 NM_017699 ENSG00000072858 SIDT1 SID-1|SID1 SID1 transmembrane family member 1 protein-coding chr9-5552 chr9 110087309 110087519 + 7.31 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) -38087 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr11-6968 chr11 114772944 114773154 + 7.31 0.000 Intergenic Intergenic 94522 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr7-3065 chr7 151238813 151239023 + 7.31 0.000 TTS (NM_001284295) TTS (NM_001284295) 497 NR_030407 768213 NR_030407 ENSG00000284191 MIR671 MIRN671|hsa-mir-671|mir-671 microRNA 671 ncRNA chr1-11186 chr1 241475761 241475971 + 7.31 0.000 Intergenic Intergenic 43919 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1 fumarate hydratase protein-coding chr2-11227 chr2 163593942 163594152 + 7.31 0.000 Intergenic Intergenic 141961 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chrX-1666 chrX 152677932 152678142 + 7.31 0.000 Intergenic L1PA5|LINE|L1 -20757 NM_005362 4102 Hs.417816 NM_005362 ENSG00000221867 MAGEA3 CT1.3|HIP8|HYPD|MAGE3|MAGEA6 MAGE family member A3 protein-coding chr4-2848 chr4 56204029 56204239 + 7.31 0.000 intron (NM_020722, intron 2 of 10) MER91A|DNA|hAT-Tip100 33939 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chrX-5061 chrX 123976948 123977158 + 7.31 0.000 intron (NM_006603, intron 1 of 32) intron (NM_006603, intron 1 of 32) 15347 NM_001042751 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr17-8294 chr17 69206256 69206466 + 7.31 0.000 intron (NM_080282, intron 10 of 39) L1M3e|LINE|L1 28651 NR_130736 100133319 NR_130736 ENSG00000278873 PRO1804 - uncharacterized LOC100133319 ncRNA chr14-4334 chr14 22947000 22947210 + 7.31 0.000 intron (NM_017815, intron 9 of 9) intron (NM_017815, intron 9 of 9) 9924 NR_039856 100616424 NR_039856 ENSG00000284118 MIR4707 mir-4707 microRNA 4707 ncRNA chr16-2359 chr16 55509593 55509803 + 7.31 0.000 intron (NM_017839, intron 1 of 13) intron (NM_017839, intron 1 of 13) 626 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding chr5-4081 chr5 61559800 61560010 + 7.31 0.000 Intergenic MIRb|SINE|MIR -77855 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr8-7465 chr8 142048697 142048907 + 7.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -127537 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr12-6814 chr12 12739079 12739289 + 7.31 0.000 intron (NM_001130415, intron 1 of 1) intron (NM_001130415, intron 1 of 1) 13267 NM_001130415 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chr2-13909 chr2 181779520 181779730 + 7.31 0.000 Intergenic Intergenic -98960 NM_002500 4760 Hs.574626 NM_002500 ENSG00000162992 NEUROD1 BETA2|BHF-1|MODY6|NEUROD|bHLHa3 neuronal differentiation 1 protein-coding chr2-9481 chr2 235852293 235852503 + 7.31 0.000 intron (NM_001037131, intron 9 of 17) intron (NM_001037131, intron 9 of 17) 315988 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr5-8910 chr5 157115784 157115994 + 7.31 0.000 Intergenic AluJb|SINE|Alu -6845 NM_032782 84868 Hs.710500 NM_032782 ENSG00000135077 HAVCR2 CD366|HAVcr-2|KIM-3|SPTCL|TIM3|TIMD-3|TIMD3|Tim-3 hepatitis A virus cellular receptor 2 protein-coding chr19-6503 chr19 18077836 18078046 + 7.31 0.000 intron (NM_001290024, intron 5 of 17) AluJb|SINE|Alu 8993 NM_153701 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr2-7769 chr2 40034249 40034459 + 7.31 0.000 intron (NR_038441, intron 2 of 4) LTR16|LTR|ERVL 116720 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr16-4360 chr16 46673561 46673771 + 7.31 0.000 intron (NM_018206, intron 10 of 16) intron (NM_018206, intron 10 of 16) 15512 NM_018206 55737 Hs.454528 NM_018206 ENSG00000069329 VPS35 MEM3|PARK17 VPS35 retromer complex component protein-coding chr2-8363 chr2 109713655 109713865 + 7.31 0.000 Intergenic L1M4|LINE|L1 -78998 NM_032260 84220 Hs.469630 NM_005054 ENSG00000015568 RGPD5 BS-63|BS63|HEL161|RGP5 RANBP2 like and GRIP domain containing 5 protein-coding chr11-7656 chr11 64472478 64472688 + 7.31 0.000 Intergenic Intergenic 23526 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr5-8368 chr5 122064934 122065144 + 7.31 0.000 3' UTR (NM_002317, exon 7 of 7) 3' UTR (NM_002317, exon 7 of 7) 12135 NM_001317073 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr9-5766 chr9 127585885 127586095 + 7.31 0.000 Intergenic L2b|LINE|L2 -6959 NM_001035534 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr10-7861 chr10 47290360 47290570 + 7.31 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -9732 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr8-6786 chr8 94718287 94718497 + 7.31 0.000 Intergenic Intergenic -1508 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr7-3549 chr7 13153941 13154151 + 7.31 0.000 Intergenic MER5A|DNA|hAT-Charlie 466413 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr19-2870 chr19 15358754 15358964 + 7.31 0.000 intron (NM_005858, intron 13 of 13) intron (NM_005858, intron 13 of 13) 20928 NM_005858 10270 Hs.594496 NM_005858 ENSG00000105127 AKAP8 AKAP 95|AKAP-8|AKAP-95|AKAP95 A-kinase anchoring protein 8 protein-coding chr2-5686 chr2 203451478 203451688 + 7.31 0.000 intron (NM_001329728, intron 12 of 15) intron (NM_001329728, intron 12 of 15) 83718 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr16-6550 chr16 64666176 64666386 + 7.31 0.000 Intergenic MIR|SINE|MIR 455782 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr6-7427 chr6 53477332 53477542 + 7.31 0.000 Intergenic L1ME4a|LINE|L1 67664 NM_001498 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr7-8989 chr7 100420880 100421090 + 7.31 0.000 intron (NM_001258008, intron 2 of 15) AluJb|SINE|Alu 7718 NM_001258008 55063 Hs.105191 NM_017984 ENSG00000078487 ZCWPW1 ZCW1 zinc finger CW-type and PWWP domain containing 1 protein-coding chr9-4256 chr9 94456985 94457195 + 7.31 0.000 intron (NM_032558, intron 10 of 11) AluSx3|SINE|Alu 82521 NM_032558 84641 Hs.555996 NM_032558 ENSG00000148110 MFSD14B HIATL1 major facilitator superfamily domain containing 14B protein-coding chr5-5030 chr5 86173458 86173668 + 7.31 0.000 Intergenic LFSINE_Vert|SINE|tRNA -108881 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr18-2314 chr18 80231389 80231599 + 7.31 0.000 intron (NM_032510, intron 1 of 2) MIRb|SINE|MIR 16020 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr16-4821 chr16 87162082 87162292 + 7.31 0.000 Intergenic LTR79|LTR|ERVL -49928 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr2-12139 chr2 37689976 37690186 + 7.31 0.000 Intergenic Intergenic -17546 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr20-2089 chr20 21047357 21047567 + 7.31 0.000 Intergenic Intergenic 58896 NR_147212 105372556 Hs.371339 NR_147212 ENSG00000225127 LINC00237 NCRNA00237 long intergenic non-protein coding RNA 237 ncRNA chr9-3489 chr9 15337781 15337991 + 7.31 0.000 Intergenic Intergenic -30526 NM_001168340 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr15-4309 chr15 39301899 39302109 + 7.31 0.000 Intergenic Intergenic 51335 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr8-3332 chr8 36976674 36976884 + 7.31 0.000 Intergenic MIR3|SINE|MIR 192405 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr3-7814 chr3 99070148 99070358 + 7.31 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -168558 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr22-4254 chr22 48251540 48251750 + 7.31 0.000 Intergenic L2a|LINE|L2 -22719 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr19-4687 chr19 18028329 18028539 + 7.31 0.000 Intergenic Intergenic 20264 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr12-3728 chr12 19530740 19530950 + 7.31 0.000 Intergenic Intergenic 90246 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr9-5773 chr9 127752477 127752687 + 7.31 0.000 intron (NM_001252334, intron 3 of 11) intron (NM_001252334, intron 3 of 11) 2700 NM_001142534 10044 Hs.306412 NM_005489 ENSG00000095370 SH2D3C CHAT|NSP3|PRO34088|SHEP1 SH2 domain containing 3C protein-coding chrX-2872 chrX 144550750 144550960 + 7.31 0.000 Intergenic L1MA2|LINE|L1 666784 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chrX-4628 chrX 77736398 77736608 + 7.31 0.000 intron (NM_000489, intron 1 of 34) L1MA2|LINE|L1 49713 NM_000489 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr2-11673 chr2 7377140 7377350 + 7.31 0.000 Intergenic Intergenic -44016 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr22-2784 chr22 41710085 41710295 + 7.31 0.000 intron (NM_152513, intron 3 of 30) MLT1B|LTR|ERVL-MaLR 10687 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr12-3641 chr12 97572110 97572320 + 7.31 0.000 Intergenic MIR|SINE|MIR 8403 NR_029678 406926 NR_029678 ENSG00000207586 MIR135A2 MIRN135-2|MIRN135A2|mir-135a-2 microRNA 135a-2 ncRNA chr3-6174 chr3 59718430 59718640 + 7.31 0.000 Intergenic Intergenic -60038 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr7-4365 chr7 66507307 66507517 + 7.31 0.000 Intergenic Intergenic 13721 NR_134571 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr4-6695 chr4 3257980 3258190 + 7.31 0.000 Intergenic Intergenic 8926 NM_001042690 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr10-3329 chr10 6960188 6960398 + 7.31 0.000 Intergenic Intergenic 180695 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr9-7524 chr9 33638828 33639038 + 7.31 0.000 Intergenic Intergenic 14708 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr17-2462 chr17 44176143 44176353 + 7.31 0.000 non-coding (NR_049730, exon 3 of 3) non-coding (NR_049730, exon 3 of 3) 5544 NM_080863 92591 Hs.534517 NM_080863 ENSG00000161664 ASB16 - ankyrin repeat and SOCS box containing 16 protein-coding chr6-6713 chr6 1186878 1187088 + 7.31 0.000 Intergenic L1MEc|LINE|L1 -85651 NR_027116 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr12-3286 chr12 74165009 74165219 + 7.31 0.000 intron (NR_038300, intron 4 of 6) AluSc|SINE|Alu 127517 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr4-5527 chr4 108220048 108220258 + 7.31 0.000 Intergenic MER63B|DNA|hAT-Blackjack 48033 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr17-4834 chr17 59216676 59216886 + 7.31 0.000 Intergenic AluSc|SINE|Alu -3730 NM_182569 284161 Hs.631744 NM_182569 ENSG00000153982 GDPD1 GDE4 glycerophosphodiester phosphodiesterase domain containing 1 protein-coding chr1-8186 chr1 20484010 20484220 + 7.31 0.000 intron (NM_018584, intron 1 of 1) CpG 2095 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding chr8-5475 chr8 46991168 46991378 + 7.31 0.000 Intergenic L2b|LINE|L2 150387 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr7-6295 chr7 139366088 139366298 + 7.31 0.000 intron (NM_016019, intron 1 of 9) intron (NM_016019, intron 1 of 9) 6299 NM_016019 51631 Hs.731488 NM_016019 ENSG00000146963 LUC7L2 CGI-59|CGI-74|LUC7B2 LUC7 like 2, pre-mRNA splicing factor protein-coding chr13-2072 chr13 63329072 63329282 + 7.31 0.000 Intergenic L2a|LINE|L2 -1083 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr6-8559 chr6 163116313 163116523 + 7.31 0.000 intron (NM_001080379, intron 4 of 4) MSTA|LTR|ERVL-MaLR -62257 NR_110871 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr13-1366 chr13 81383360 81383570 + 7.31 0.000 Intergenic MER72|LTR|ERV1 -156482 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr8-6638 chr8 78202514 78202724 + 7.31 0.000 Intergenic L1PB1|LINE|L1 -313721 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr8-6938 chr8 104127470 104127680 + 7.31 0.000 intron (NM_001348498, intron 19 of 24) MIR|SINE|MIR -95760 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr2-14109 chr2 200935339 200935549 + 7.31 0.000 intron (NR_033915, intron 9 of 16) intron (NR_033915, intron 9 of 16) 28216 NM_006190 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr10-4764 chr10 3785322 3785532 + 7.31 0.000 promoter-TSS (NM_001160124) promoter-TSS (NM_001160124) -146 NM_001160125 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr2-6617 chr2 238353330 238353540 + 7.31 0.000 intron (NM_001139490, intron 12 of 14) intron (NM_001139490, intron 12 of 14) 32891 NM_001139490 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding chr20-2884 chr20 62961722 62961932 + 7.31 0.000 intron (NM_001302643, intron 5 of 13) intron (NM_001302643, intron 5 of 13) 9118 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr10-7680 chr10 28722501 28722711 + 7.31 0.000 Intergenic Intergenic -21044 NR_120652 101929218 Hs.224866 NR_120652 LINC01517 - long intergenic non-protein coding RNA 1517 ncRNA chr3-6123 chr3 54263023 54263233 + 7.31 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 140576 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr7-5193 chr7 10811789 10811999 + 7.31 0.000 Intergenic L1PA4|LINE|L1 -31950 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA chr1-15536 chr1 157412015 157412225 + 7.31 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 140395 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr15-2523 chr15 40960587 40960797 + 7.31 0.000 Intergenic Intergenic 7221 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr4-8407 chr4 152080095 152080305 + 7.31 0.000 Intergenic Intergenic -20553 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr4-8520 chr4 162848414 162848624 + 7.31 0.000 Intergenic L1M2b|LINE|L1 245109 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-5444 chr7 38462826 38463036 + 7.31 0.000 intron (NM_001635, intron 10 of 20) intron (NM_001635, intron 10 of 20) 121354 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr7-4920 chr7 131893726 131893936 + 7.31 0.000 Intergenic Intergenic -16389 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr14-4421 chr14 31759781 31759991 + 7.31 0.000 intron (NM_001201574, intron 1 of 5) Tigger5b|DNA|TcMar-Tigger 45317 NM_001201574 80224 Hs.288981 NM_025152 ENSG00000151413 NUBPL C14orf127|IND1|MC1DN21|huInd1 nucleotide binding protein like protein-coding chr17-8253 chr17 66663119 66663329 + 7.31 0.000 intron (NM_002737, intron 5 of 16) intron (NM_002737, intron 5 of 16) -123848 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr17-8524 chr17 79325061 79325271 + 7.31 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 190982 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr16-4287 chr16 27052669 27052879 + 7.31 0.000 Intergenic Intergenic -14153 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr5-4716 chr5 42547897 42548107 + 7.31 0.000 promoter-TSS (NM_001242402) promoter-TSS (NM_001242402) -41 NM_001242402 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr10-5231 chr10 64220557 64220767 + 7.31 0.000 Intergenic L1ME3B|LINE|L1 -604866 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr2-8697 chr2 152418739 152418949 + 7.31 0.000 intron (NM_052905, intron 1 of 25) L1MB4|LINE|L1 83670 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr14-5175 chr14 92279496 92279706 + 7.31 0.000 Intergenic Intergenic -42980 NM_153648 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr4-7146 chr4 38259902 38260112 + 7.31 0.000 Intergenic LTR33A|LTR|ERVL -106907 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr14-3262 chr14 77967979 77968189 + 7.31 0.000 Intergenic Intergenic 167975 NM_001366488 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr13-1850 chr13 110635258 110635468 + 7.31 0.000 intron (NR_040103, intron 7 of 9) intron (NR_040103, intron 7 of 9) 19779 NM_001242881 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr1-11553 chr1 178959983 178960193 + 7.31 0.000 Intergenic Intergenic -65716 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr1-10241 chr1 116675120 116675330 + 7.31 0.000 Intergenic AluJo|SINE|Alu 3479 NR_031564 100302117 NR_031564 ENSG00000211543 MIR320B1 MIR320B-1|MIRN320B1|hsa-mir-320b-1|mir-320b-1 microRNA 320b-1 ncRNA chrX-3771 chrX 131316653 131316863 + 7.31 0.000 Intergenic Intergenic -27329 NM_001170961 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr6-4863 chr6 87992872 87993082 + 7.31 0.000 Intergenic Intergenic -54864 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr21-1636 chr21 22706969 22707179 + 7.31 0.000 Intergenic L1PA17|LINE|L1 -372210 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA chr19-6232 chr19 6335518 6335728 + 7.31 0.000 Intergenic AluY|SINE|Alu -2011 NM_133492 125981 Hs.352609 NM_133492 ENSG00000167769 ACER1 ALKCDase1|ASAH3 alkaline ceramidase 1 protein-coding chr9-7496 chr9 31433936 31434146 + 7.31 0.000 Intergenic L2a|LINE|L2 -52551 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chrX-998 chrX 22389696 22389906 + 7.31 0.000 intron (NR_073010, intron 4 of 11) intron (NR_073010, intron 4 of 11) 116888 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr2-12300 chr2 46861562 46861772 + 7.31 0.000 Intergenic Intergenic 33803 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA chr1-8156 chr1 15431584 15431794 + 7.31 0.000 Intergenic Intergenic -6754 NM_007272 11330 Hs.631869 NM_007272 ENSG00000162438 CTRC CLCR|ELA4 chymotrypsin C protein-coding chr8-3281 chr8 20545521 20545731 + 7.31 0.000 Intergenic Intergenic 69300 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr16-6722 chr16 72704914 72705124 + 7.31 0.000 Intergenic Intergenic -40049 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr22-2417 chr22 18957897 18958107 + 7.31 0.000 Intergenic Intergenic -12496 NR_045121 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr2-13094 chr2 112431580 112431790 + 7.31 0.000 intron (NM_005054, intron 1 of 22).3 AluSx|SINE|Alu 1929 NM_005054 84220 Hs.469630 NM_005054 ENSG00000015568 RGPD5 BS-63|BS63|HEL161|RGP5 RANBP2 like and GRIP domain containing 5 protein-coding chr5-8078 chr5 95388888 95389098 + 7.31 0.000 Intergenic Intergenic -2373 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr19-3430 chr19 18666036 18666246 + 7.31 0.000 intron (NM_018316, intron 2 of 2) intron (NM_018316, intron 2 of 2) -17539 NM_001098482 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr19-2721 chr19 33217984 33218194 + 7.31 0.000 intron (NM_019849, intron 1 of 10) intron (NM_019849, intron 1 of 10) 7761 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr8-6209 chr8 37147343 37147553 + 7.31 0.000 Intergenic Intergenic 346465 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr8-7214 chr8 126547215 126547425 + 7.31 0.000 Intergenic Intergenic 11158 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr22-3627 chr22 21102175 21102385 + 7.31 0.000 promoter-TSS (NR_037566) promoter-TSS (NR_037566) -736 NR_037566 400892 Hs.745077 NM_207474 BCRP2 BCR-2|BCR2|BCRL2 BCR pseudogene 2 pseudo chr9-5104 chr9 35533184 35533394 + 7.31 0.000 intron (NM_001330740, intron 1 of 10) intron (NM_001330740, intron 1 of 10) -5343 NM_001135999 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr10-6608 chr10 92483781 92483991 + 7.31 0.000 intron (NR_136399, intron 13 of 25) MLT1F|LTR|ERVL-MaLR 13875 NM_001165946 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr2-12031 chr2 29295990 29296200 + 7.31 0.000 intron (NM_004304, intron 9 of 28) intron (NM_004304, intron 9 of 28) -72195 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr8-5747 chr8 139974242 139974452 + 7.31 0.000 intron (NM_001160372, intron 19 of 22) intron (NM_001160372, intron 19 of 22) 126188 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr5-3583 chr5 80961000 80961210 + 7.31 0.000 promoter-TSS (NR_105015) promoter-TSS (NR_105015) -198 NR_105015 102524628 Hs.737159 NR_105015 ENSG00000251450 RASGRF2-AS1 - RASGRF2 antisense RNA 1 ncRNA chr2-9145 chr2 210950475 210950685 + 7.31 0.000 Intergenic SVA_C|Retroposon|SVA 333009 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr11-8958 chr11 19912860 19913070 + 7.31 0.000 intron (NM_182964, intron 6 of 37) intron (NM_182964, intron 6 of 37) -109591 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr2-14689 chr2 237570843 237571053 + 7.31 0.000 Intergenic Intergenic 4374 NM_015893 51052 Hs.247710 NM_015893 ENSG00000071677 PRLH PRH|PRRP prolactin releasing hormone protein-coding chr10-7958 chr10 56131487 56131697 + 7.31 0.000 Intergenic L1PA8|LINE|L1 229667 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr9-6983 chr9 109689876 109690086 + 7.31 0.000 intron (NM_001037293, intron 1 of 6) LTR79|LTR|ERVL 49193 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr14-2158 chr14 89445480 89445690 + 7.31 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 28231 NR_036500 400236 Hs.585207 NR_036500 ENSG00000258920 FOXN3-AS1 - FOXN3 antisense RNA 1 ncRNA chr1-11569 chr1 200748626 200748836 + 7.31 0.000 intron (NM_001297707, intron 1 of 17) L1MC5|LINE|L1 9159 NM_001297707 23271 Hs.23585 NM_203459 ENSG00000118200 CAMSAP2 CAMSAP1L1 calmodulin regulated spectrin associated protein family member 2 protein-coding chr11-5222 chr11 17042321 17042531 + 7.31 0.000 Intergenic SATR1|Satellite|Satellite -9460 NR_045002 10819 Hs.523504 NR_045002 ENSG00000184669 OR7E14P OR11-5|OR7E151P olfactory receptor family 7 subfamily E member 14 pseudogene pseudo chr10-4868 chr10 16143924 16144134 + 7.31 0.000 Intergenic Charlie2a|DNA|hAT-Charlie -283496 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chrX-2589 chrX 104983011 104983221 + 7.31 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 237577 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr13-1924 chr13 73708437 73708647 + 7.31 0.000 intron (NM_007249, intron 7 of 7) intron (NM_007249, intron 7 of 7) 144298 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr4-4865 chr4 113761988 113762198 + 7.31 0.000 promoter-TSS (NM_001321585) promoter-TSS (NM_001321585) -166 NM_172127 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr5-3628 chr5 137156263 137156473 + 7.31 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 28171 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr17-5807 chr17 64302340 64302550 + 7.31 0.000 Intergenic Intergenic -39185 NM_018469 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr2-4859 chr2 98184157 98184367 + 7.31 0.000 intron (NR_144297, intron 10 of 18) intron (NR_144297, intron 10 of 18) 34729 NM_001345864 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr1-10052 chr1 91191698 91191908 + 7.31 0.000 Intergenic L2a|LINE|L2 -169548 NM_032186 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding chr7-6125 chr7 122521344 122521554 + 7.31 0.000 intron (NM_001167940, intron 8 of 29) intron (NM_001167940, intron 8 of 29) 177668 NM_139175 168433 Hs.126730 NM_139175 ENSG00000188050 RNF133 - ring finger protein 133 protein-coding chr1-15817 chr1 178616036 178616246 + 7.31 0.000 Intergenic MIRc|SINE|MIR -61608 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chr19-2993 chr19 41782910 41783120 + 7.31 0.000 Intergenic Intergenic -13572 NM_001815 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr1-14815 chr1 72647193 72647403 + 7.31 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -364759 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr1-8872 chr1 4059378 4059588 + 7.31 0.000 Intergenic Intergenic -110503 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr12-3907 chr12 124801010 124801220 + 7.31 0.000 intron (NR_160424, intron 7 of 11) AluJb|SINE|Alu 38556 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding KI270722.1-2 KI270722.1 48414 48624 + 7.31 0.000 NA NA NA NA chr6-7246 chr6 41640067 41640277 + 7.31 0.000 intron (NM_001300805, intron 2 of 3) intron (NM_001300805, intron 2 of 3) 1704 NM_001300806 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding chr13-3094 chr13 51105373 51105583 + 7.31 0.000 intron (NR_102432, intron 1 of 3) L4_B_Mam|LINE|RTE-X 5750 NM_001351589 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr2-12872 chr2 97673201 97673411 + 7.31 0.000 intron (NR_038386, intron 2 of 9) intron (NR_038386, intron 2 of 9) 3563 NM_001351368 728537 Hs.469369 NM_001351368 ENSG00000228486 C2orf92 LINC01125 chromosome 2 open reading frame 92 protein-coding chr6-7384 chr6 50086915 50087125 + 7.31 0.000 Intergenic Intergenic -37091 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding chr1-8352 chr1 58042010 58042220 + 7.31 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 181534 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr3-3448 chr3 146334225 146334435 + 7.31 0.000 Intergenic HERVP71A-int|LTR|ERV1 -83151 NM_001128306 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr4-3273 chr4 121938138 121938348 + 7.31 0.000 intron (NM_001130698, intron 1 of 11) intron (NM_001130698, intron 1 of 11) -5130 NM_003305 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr11-9080 chr11 30602915 30603125 + 7.31 0.000 Intergenic Intergenic -16667 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr11-4859 chr11 30903749 30903959 + 7.31 0.000 intron (NM_001367979, intron 31 of 38) intron (NM_001367979, intron 31 of 38) 88832 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr1-8293 chr1 42723756 42723966 + 7.31 0.000 Intergenic FLAM_A|SINE|Alu 16375 NM_148960 149461 Hs.496270 NM_148960 ENSG00000164007 CLDN19 HOMG5 claudin 19 protein-coding chr2-8246 chr2 98552596 98552806 + 7.31 0.000 intron (NM_001134224, intron 14 of 25) intron (NM_001134224, intron 14 of 25) 55811 NM_001008215 493753 Hs.596537 NM_001008215 ENSG00000183513 COA5 6330578E17Rik|C2orf64|CEMCOX3|Pet191 cytochrome c oxidase assembly factor 5 protein-coding chr4-5299 chr4 177356302 177356512 + 7.31 0.000 intron (NM_018248, intron 8 of 9) intron (NM_018248, intron 8 of 9) 46533 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr16-6048 chr16 10679589 10679799 + 7.31 0.000 intron (NM_144674, intron 4 of 6) AluSp|SINE|Alu 15236 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr6-7775 chr6 96629416 96629626 + 7.31 0.000 Intergenic Intergenic 66396 NM_001322467 9457 Hs.632608 NM_020482 ENSG00000112214 FHL5 1700027G07Rik|ACT|FHL-5|dJ393D12.2 four and a half LIM domains 5 protein-coding chr2-8896 chr2 179089103 179089313 + 7.31 0.000 Intergenic L1PA4|LINE|L1 -39071 NM_173648 285025 Hs.324341 NM_173648 ENSG00000163492 CCDC141 CAMDI coiled-coil domain containing 141 protein-coding chr3-8813 chr3 7269955 7270165 + 7.31 0.000 intron (NM_000844, intron 2 of 9) MER5A|DNA|hAT-Charlie 265224 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA ML143377.1-8 ML143377.1 226962 227172 + 7.31 0.000 NA NA NA NA chr4-5115 chr4 149636099 149636309 + 7.31 0.000 intron (NM_001363507, intron 7 of 13) L1ME2|LINE|L1 179639 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr13-4107 chr13 79534346 79534556 + 7.31 0.000 intron (NM_019080, intron 3 of 7) intron (NM_019080, intron 3 of 7) -32276 NR_125772 103724388 Hs.434862 NR_125772 ENSG00000227676 LINC01068 - long intergenic non-protein coding RNA 1068 ncRNA chr16-5273 chr16 56872960 56873170 + 7.31 0.000 intron (NM_001126108, intron 8 of 25) intron (NM_001126108, intron 8 of 25) 7858 NM_000339 6559 Hs.669115 NM_000339 ENSG00000070915 SLC12A3 NCC|NCCT|TSC solute carrier family 12 member 3 protein-coding chr7-9729 chr7 157195499 157195709 + 7.31 0.000 intron (NM_014671, intron 10 of 22) MLT1D-int|LTR|ERVL-MaLR 56678 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr6-4348 chr6 18307077 18307287 + 7.31 0.000 Intergenic Intergenic -42652 NM_001134709 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr2-2043 chr2 150621958 150622168 + 7.31 0.000 Intergenic Intergenic -6834 NR_110245 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr6-4120 chr6 157967141 157967351 + 7.31 0.000 Intergenic Intergenic -14617 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr6-4690 chr6 54805265 54805475 + 7.31 0.000 Intergenic Intergenic -41401 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr8-5325 chr8 145021765 145021975 + 7.31 0.000 Intergenic LTR5A|LTR|ERVK -18971 NR_023392 286101 Hs.367856 NR_023392 ZNF252P ZNF252 zinc finger protein 252, pseudogene pseudo chr11-8309 chr11 74473869 74474079 + 7.31 0.000 Intergenic L2c|LINE|L2 -6419 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 BRGDA6|HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr3-10979 chr3 178172317 178172527 + 7.31 0.000 Intergenic Intergenic -246779 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr13-2751 chr13 98293739 98293949 + 7.31 0.000 intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 85320 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr11-6001 chr11 21446847 21447057 + 7.31 0.000 intron (NM_201551, intron 15 of 18) L1M1|LINE|L1 -746133 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr20-2821 chr20 59222086 59222296 + 7.31 0.000 intron (NM_178457, intron 3 of 4) CpG 31171 NM_178457 128611 Hs.473204 NM_178457 ENSG00000124203 ZNF831 C20orf174 zinc finger protein 831 protein-coding chrX-2914 chrX 151596312 151596522 + 7.31 0.000 intron (NM_173493, intron 1 of 15) MSTB2|LTR|ERVL-MaLR 32742 NM_173493 139135 Hs.160594 NM_173493 ENSG00000166049 PASD1 CT63|CT64|OXTES1 PAS domain containing repressor 1 protein-coding chrX-3382 chrX 153861942 153862152 + 7.31 0.000 3' UTR (NM_001143963, exon 26 of 26) 3' UTR (NM_001143963, exon 26 of 26) 13897 NM_001143963 3897 Hs.522818 NM_000425 ENSG00000198910 L1CAM CAML1|CD171|HSAS|HSAS1|MASA|MIC5|N-CAM-L1|N-CAML1|NCAM-L1|S10|SPG1 L1 cell adhesion molecule protein-coding chr8-6017 chr8 23145941 23146151 + 7.31 0.000 intron (NM_003840, intron 4 of 8) intron (NM_003840, intron 4 of 8) 17981 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr4-7734 chr4 91603209 91603419 + 7.31 0.000 Intergenic Intergenic 673988 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr18-1953 chr18 36727673 36727883 + 7.31 0.000 intron (NM_001281740, intron 19 of 28) intron (NM_001281740, intron 19 of 28) -64360 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr9-4757 chr9 132466059 132466269 + 7.31 0.000 intron (NM_001282957, intron 1 of 5) AluJb|SINE|Alu 55953 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chrX-2184 chrX 39431902 39432112 + 7.31 0.000 Intergenic Intergenic -40233 NR_110385 101927449 Hs.553988 NR_110385 ENSG00000236747 LINC01282 - long intergenic non-protein coding RNA 1282 ncRNA chr16-6549 chr16 64594746 64594956 + 7.31 0.000 Intergenic MLT2B1|LTR|ERVL 527212 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr9-6777 chr9 27329336 27329546 + 7.31 0.000 3' UTR (NM_024761, exon 4 of 4) 3' UTR (NM_024761, exon 4 of 4) -32291 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chrX-1131 chrX 29334101 29334311 + 7.31 0.000 intron (NM_014271, intron 3 of 10) intron (NM_014271, intron 3 of 10) -240072 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr13-3938 chr13 60146572 60146782 + 7.31 0.000 intron (NR_046540, intron 1 of 2) intron (NR_046540, intron 1 of 2) 1979 NR_046540 100874196 Hs.662188 NR_046540 ENSG00000223815 DIAPH3-AS2 DIPAH3-AS2 DIAPH3 antisense RNA 2 ncRNA chr1-16015 chr1 199161377 199161587 + 7.31 0.000 non-coding (NR_147896, exon 2 of 4) non-coding (NR_147896, exon 2 of 4) 12884 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr1-7540 chr1 179224781 179224991 + 7.31 0.000 intron (NM_007314, intron 1 of 11) AluJo|SINE|Alu 4791 NM_001168237 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr2-7740 chr2 37481519 37481729 + 7.31 0.000 Intergenic MER52A|LTR|ERV1 136994 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr5-5486 chr5 140521846 140522056 + 7.31 0.000 intron (NM_020690, intron 24 of 35) AluSx|SINE|Alu -25711 NM_003732 8637 Hs.594084 NM_003732 ENSG00000243056 EIF4EBP3 4E-BP3|4EBP3 eukaryotic translation initiation factor 4E binding protein 3 protein-coding chr13-3077 chr13 43924770 43924980 + 7.31 0.000 Intergenic MSTB|LTR|ERVL-MaLR 44971 NM_153218 144811 Hs.210586 NM_153218 ENSG00000179630 LACC1 C13orf31|FAMIN laccase domain containing 1 protein-coding chr12-6511 chr12 108151499 108151709 + 7.31 0.000 intron (NM_001304447, intron 1 of 9) MIRb|SINE|MIR 19818 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr8-5731 chr8 135464030 135464240 + 7.31 0.000 intron (NM_006558, intron 1 of 8) intron (NM_006558, intron 1 of 8) 6679 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr8-6117 chr8 28518392 28518602 + 7.31 0.000 intron (NM_017412, intron 3 of 7) L1ME1|LINE|L1 -13315 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr13-4242 chr13 96265406 96265616 + 7.31 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) -161718 NR_039723 100616137 NR_039723 ENSG00000283487 MIR4501 - microRNA 4501 ncRNA chr9-4690 chr9 124800348 124800558 + 7.31 0.000 promoter-TSS (NM_001282715) promoter-TSS (NM_001282715) -421 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr9-7702 chr9 72467706 72467916 + 7.31 0.000 Intergenic Intergenic -53990 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr15-2434 chr15 73683708 73683918 + 7.31 0.000 promoter-TSS (NM_001329628) promoter-TSS (NM_001329628) -468 NM_025240 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding chr17-5698 chr17 53594616 53594826 + 7.31 0.000 Intergenic L1M1|LINE|L1 -228206 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr6-4584 chr6 43467549 43467759 + 7.31 0.000 Intergenic THE1B|LTR|ERVL-MaLR -9869 NM_001146016 93643 Hs.520145 NM_080604 ENSG00000137221 TJAP1 PILT|TJP4 tight junction associated protein 1 protein-coding chr15-3918 chr15 33692562 33692772 + 7.31 0.000 intron (NM_001243996, intron 38 of 102) intron (NM_001243996, intron 38 of 102) -275830 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr1-10823 chr1 203495853 203496063 + 7.31 0.000 intron (NM_014359, intron 1 of 7) intron (NM_014359, intron 1 of 7) 1805 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr11-2644 chr11 47197060 47197270 + 7.31 0.000 Intergenic AluJb|SINE|Alu -10731 NM_016223 29763 Hs.334639 NM_016223 ENSG00000165912 PACSIN3 SDPIII protein kinase C and casein kinase substrate in neurons 3 protein-coding chr1-15658 chr1 164864075 164864285 + 7.31 0.000 intron (NM_001353131, intron 7 of 7) intron (NM_001353131, intron 7 of 7) -89539 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr10-7492 chr10 11770642 11770852 + 7.31 0.000 Intergenic L1MB8|LINE|L1 28365 NM_024693 79746 Hs.22242 NM_024693 ENSG00000134463 ECHDC3 - enoyl-CoA hydratase domain containing 3 protein-coding chr3-4724 chr3 62783250 62783460 + 7.31 0.000 intron (NM_003716, intron 1 of 29) intron (NM_003716, intron 1 of 29) 92061 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr16-4756 chr16 84925340 84925550 + 7.31 0.000 Intergenic Intergenic 86090 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr19-4539 chr19 9722009 9722219 + 7.31 0.000 Intergenic LTR10A|LTR|ERV1 -21338 NR_146444 729648 Hs.626848 NM_001199814 ZNF812P ZNF812 zinc finger protein 812, pseudogene pseudo chrX-4465 chrX 57580124 57580334 + 7.31 0.000 Intergenic Intergenic -11607 NM_007157 158586 Hs.156257 NM_007157 ENSG00000198455 ZXDB ZNF905|dJ83L6.1 zinc finger X-linked duplicated B protein-coding chr6-6490 chr6 115476125 115476335 + 7.31 0.000 Intergenic L1PA6|LINE|L1 167605 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr11-8028 chr11 16463362 16463572 + 7.31 0.000 intron (NM_001367872, intron 3 of 16) L2a|LINE|L2 12921 NM_033326 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr5-7514 chr5 36202693 36202903 + 7.31 0.000 intron (NM_001085411, intron 8 of 11) MLT1J2|LTR|ERVL-MaLR 38593 NM_001287340 133686 Hs.81907 NM_153013 ENSG00000152620 NADK2 C5orf33|DECRD|MNADK|NADKD1 NAD kinase 2, mitochondrial protein-coding chr3-9997 chr3 99818399 99818609 + 7.31 0.000 intron (NR_110821, intron 2 of 2) MIR|SINE|MIR 642 NM_032359 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr5-8312 chr5 116646951 116647161 + 7.31 0.000 Intergenic Charlie3|DNA|hAT-Charlie -72233 NM_020796 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding chr5-8153 chr5 101762856 101763066 + 7.31 0.000 Intergenic LTR18A|LTR|ERVL 533323 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr20-2571 chr20 37238512 37238722 + 7.31 0.000 intron (NM_001135771, intron 16 of 16) intron (NM_001135771, intron 16 of 16) 18291 NM_021081 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chr1-14948 chr1 87278792 87279002 + 7.31 0.000 Intergenic Intergenic -49983 NM_006769 8543 Hs.436792 NM_006769 ENSG00000143013 LMO4 - LIM domain only 4 protein-coding chr6-1745 chr6 45640032 45640242 + 7.31 0.000 Intergenic Intergenic 217862 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr4-5942 chr4 154518004 154518214 + 7.31 0.000 Intergenic Intergenic -26310 NM_001142552 54798 Hs.655664 NM_017639 ENSG00000197410 DCHS2 CDH27|CDHJ|CDHR7|PCDH23|PCDHJ dachsous cadherin-related 2 protein-coding chr7-3151 chr7 70788281 70788491 + 7.31 0.000 intron (NM_015570, intron 18 of 18) intron (NM_015570, intron 18 of 18) -343758 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr3-8656 chr3 177693798 177694008 + 7.31 0.000 intron (NR_047568, intron 3 of 3) Tigger3b|DNA|TcMar-Tigger -122962 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr22-2808 chr22 42908970 42909180 + 7.31 0.000 intron (NM_001349974, intron 1 of 9) intron (NM_001349974, intron 1 of 9) 37966 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr22-1516 chr22 49025709 49025919 + 7.31 0.000 Intergenic Intergenic 159044 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr1-14889 chr1 82064912 82065122 + 7.31 0.000 Intergenic L2b|LINE|L2 262564 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr1-15562 chr1 158920924 158921134 + 7.31 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -10523 NM_198930 149628 Hs.710248 NM_152501 ENSG00000163564 PYHIN1 IFIX pyrin and HIN domain family member 1 protein-coding chr10-9151 chr10 128305876 128306086 + 7.31 0.000 intron (NR_120619, intron 2 of 5) intron (NR_120619, intron 2 of 5) 20031 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr18-3165 chr18 42655318 42655528 + 7.31 0.000 intron (NR_046174, intron 7 of 9) L2a|LINE|L2 460262 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr11-8979 chr11 21321772 21321982 + 7.31 0.000 intron (NM_201551, intron 14 of 18) L2b|LINE|L2 652291 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr11-9049 chr11 27903051 27903261 + 7.31 0.000 Intergenic Intergenic -153659 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr16-4195 chr16 11456642 11456852 + 7.31 0.000 intron (NM_001370704, intron 28 of 66) L2b|LINE|L2 -8513 NR_110907 101927131 Hs.569654 NR_110907 ENSG00000262999 LOC101927131 - uncharacterized LOC101927131 ncRNA chr2-11724 chr2 10447338 10447548 + 7.31 0.000 promoter-TSS (NR_028374) promoter-TSS (NR_028374) 569 NM_001287189 4953 Hs.467701 NM_002539 ENSG00000115758 ODC1 ODC ornithine decarboxylase 1 protein-coding chr4-1495 chr4 41458772 41458982 + 7.31 0.000 intron (NM_001289122, intron 1 of 25) intron (NM_001289122, intron 1 of 25) -79280 NM_001330672 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr21-978 chr21 9010273 9010483 + 7.31 0.000 Intergenic MER65C|LTR|ERV1 22761 NR_162105 113218501 NR_162105 MIR10396A - microRNA 10396a ncRNA chr2-7207 chr2 217369093 217369303 + 7.31 0.000 intron (NR_026597, intron 8 of 12) MLT1I|LTR|ERVL-MaLR 86465 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chrX-5291 chrX 141974534 141974744 + 7.31 0.000 Intergenic L2a|LINE|L2 70745 NM_005462 9947 Hs.132194 NM_005462 ENSG00000155495 MAGEC1 CT7|CT7.1 MAGE family member C1 protein-coding chr8-4038 chr8 61139511 61139721 + 7.31 0.000 Intergenic CpG -148354 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr6-3462 chr6 169231249 169231459 + 7.31 0.000 intron (NM_003247, intron 14 of 22) MLT1D|LTR|ERVL-MaLR 18142 NR_134621 101929523 Hs.442696 NR_134621 ENSG00000226445 LOC101929523 - uncharacterized LOC101929523 ncRNA chr4-5961 chr4 167620483 167620693 + 7.31 0.000 Intergenic Intergenic -385998 NM_001251967 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr2-6970 chr2 127275147 127275357 + 7.31 0.000 intron (NM_001303418, intron 10 of 14) FLAM_C|SINE|Alu 18892 NM_001303418 2071 Hs.469872 NM_000122 ENSG00000163161 ERCC3 BTF2|GTF2H|RAD25|TFIIH|TTD2|XPB ERCC excision repair 3, TFIIH core complex helicase subunit protein-coding chr7-8890 chr7 92130639 92130849 + 7.31 0.000 intron (NM_000786, intron 2 of 9) L2c|LINE|L2 3733 NM_000786 1595 Hs.417077 NM_000786 ENSG00000001630 CYP51A1 CP51|CYP51|CYPL1|LDM|P450-14DM|P450L1 cytochrome P450 family 51 subfamily A member 1 protein-coding chrX-5232 chrX 136547882 136548092 + 7.31 0.000 intron (NM_016267, intron 2 of 4) (CCCTT)n|Simple_repeat|Simple_repeat -2891 NR_030631 100126324 NR_030631 ENSG00000216060 MIR934 MIRN934|hsa-mir-934|mir-934 microRNA 934 ncRNA chr6-5385 chr6 152218970 152219180 + 7.31 0.000 exon (NM_033071, exon 119 of 146) exon (NM_033071, exon 119 of 146) -33697 NM_001347701 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr11-8481 chr11 118429397 118429607 + 7.31 0.000 Intergenic Intergenic -6988 NM_001197104 4297 Hs.258855 NM_005933 ENSG00000118058 KMT2A ALL-1|CXXC7|HRX|HTRX1|MLL|MLL1|MLL1A|TRX1|WDSTS lysine methyltransferase 2A protein-coding chr8-4863 chr8 46845075 46845285 + 7.31 0.000 intron (NR_027012, intron 4 of 11) BSR/Beta|Satellite|Satellite 4294 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr7-4316 chr7 32069895 32070105 + 7.31 0.000 intron (NM_001191059, intron 2 of 18) intron (NM_001191059, intron 2 of 18) 407 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr1-9692 chr1 51619030 51619240 + 7.31 0.000 intron (NM_148906, intron 1 of 22) intron (NM_148906, intron 1 of 22) 2043 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr13-1875 chr13 28568538 28568748 + 7.31 0.000 Intergenic Intergenic -73515 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr7-7555 chr7 117186182 117186392 + 7.31 0.000 intron (NR_002332, intron 2 of 8) Tigger7|DNA|TcMar-Tigger 3606 NR_002332 93655 Hs.368131 NR_002332 ENSG00000004866 ST7-OT3 NCRNA00026|ST7|ST7OT3 ST7 overlapping transcript 3 ncRNA chr10-9184 chr10 131477356 131477566 + 7.31 0.000 Intergenic MIR|SINE|MIR -165740 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr20-4265 chr20 49456013 49456223 + 7.31 0.000 intron (NM_004975, intron 1 of 1) MER58D|DNA|hAT-Charlie 26550 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr7-1697 chr7 727162 727372 + 7.31 0.000 promoter-TSS (NM_001164760) promoter-TSS (NM_001164760) 14 NM_001164760 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr3-8800 chr3 6039478 6039688 + 7.31 0.000 Intergenic MER58A|DNA|hAT-Charlie 765866 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr1-13827 chr1 19558725 19558935 + 7.31 0.000 Intergenic AluJo|SINE|Alu 38002 NR_135054 105378614 Hs.430098 NR_135054 ENSG00000235185 LOC105378614 - uncharacterized LOC105378614 ncRNA chr1-15366 chr1 148315387 148315597 + 7.31 0.000 Intergenic Intergenic 19062 NR_049810 100847044 NR_049810 ENSG00000283676 MIR5087 - microRNA 5087 ncRNA chr8-6602 chr8 73520676 73520886 + 7.31 0.000 intron (NM_001164383, intron 8 of 9) MLT1L|LTR|ERVL-MaLR 100707 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA chr9-5759 chr9 127463399 127463609 + 7.31 0.000 intron (NM_001190723, intron 9 of 24) MLT1B|LTR|ERVL-MaLR 11249 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr1-15804 chr1 177245387 177245597 + 7.31 0.000 intron (NM_021165, intron 2 of 7) intron (NM_021165, intron 2 of 7) 74534 NM_021165 57795 Hs.495918 NM_021165 ENSG00000198797 BRINP2 DBCCR1L2|FAM5B BMP/retinoic acid inducible neural specific 2 protein-coding chr8-5078 chr8 40852499 40852709 + 7.31 0.000 intron (NM_024645, intron 1 of 6) Charlie1a|DNA|hAT-Charlie 45222 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr3-5653 chr3 11629711 11629921 + 7.31 0.000 intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) 14099 NM_001128219 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr17-8179 chr17 61919818 61920028 + 7.31 0.000 intron (NM_001351695, intron 4 of 24) intron (NM_001351695, intron 4 of 24) 8059 NM_001330417 57508 Hs.279646 NM_020748 ENSG00000108506 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding chr6-7589 chr6 74750502 74750712 + 7.31 0.000 Intergenic Intergenic 378175 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr4-4557 chr4 73589583 73589793 + 7.31 0.000 intron (NM_001270391, intron 4 of 9) intron (NM_001270391, intron 4 of 9) 30748 NM_001270391 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr5-8311 chr5 116543668 116543878 + 7.31 0.000 intron (NM_001300780, intron 1 of 19) intron (NM_001300780, intron 1 of 19) -30645 NR_147170 105379132 NR_147170 SEMA6A-AS2 - SEMA6A antisense RNA 2 ncRNA chr7-4406 chr7 99600261 99600471 + 7.31 0.000 intron (NM_001195543, intron 2 of 5) intron (NM_001195543, intron 2 of 5) 2099 NM_001195543 100289187 Hs.729333 NM_001195541 ENSG00000244219 TMEM225B GS1-259H13.2 transmembrane protein 225B protein-coding chr2-3332 chr2 191742364 191742574 + 7.31 0.000 Intergenic SVA_D|Retroposon|SVA -50371 NR_157850 729254 NR_157850 LOC729254 - hCG2045843 ncRNA chr2-14809 chr2 240966614 240966824 + 7.31 0.000 intron (NM_001351305, intron 25 of 31) intron (NM_001351305, intron 25 of 31) 732 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr13-1914 chr13 55075838 55076048 + 7.31 0.000 Intergenic AluYm1|SINE|Alu -98511 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr4-8466 chr4 156892958 156893168 + 7.31 0.000 intron (NR_036641, intron 1 of 6) intron (NR_036641, intron 1 of 6) 78736 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr11-8259 chr11 67695451 67695661 + 7.31 0.000 Intergenic HERVIP10F-int|LTR|ERV1 -14332 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr8-4245 chr8 90297263 90297473 + 7.31 0.000 intron (NR_051989, intron 2 of 3) intron (NR_051989, intron 2 of 3) 75880 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chrX-3705 chrX 112784320 112784530 + 7.31 0.000 intron (NM_133265, intron 8 of 11) MIR|SINE|MIR -3637 NR_036255 100423009 NR_036255 ENSG00000283775 MIR4329 - microRNA 4329 ncRNA chr17-5893 chr17 72614082 72614292 + 7.31 0.000 intron (NR_033876, intron 3 of 4) intron (NR_033876, intron 3 of 4) -21383 NR_137280 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr19-4816 chr19 35504489 35504699 + 7.31 0.000 intron (NM_001190349, intron 8 of 8) AluSx1|SINE|Alu -2683 NM_001035516 93099 Hs.417795 NM_033317 ENSG00000161249 DMKN UNQ729|ZD52F10 dermokine protein-coding chr7-6413 chr7 155812134 155812344 + 7.31 0.000 5' UTR (NM_000193, exon 1 of 3) 5' UTR (NM_000193, exon 1 of 3) 224 NM_000193 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr2-6899 chr2 97046646 97046856 + 7.31 0.000 Intergenic Intergenic 48131 NM_001320848 151313 Hs.567723 NM_199336 ENSG00000144199 FAHD2B - fumarylacetoacetate hydrolase domain containing 2B protein-coding chr2-7432 chr2 10689556 10689766 + 7.31 0.000 promoter-TSS (NR_144555) promoter-TSS (NR_144555) 314 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr15-975 chr15 55834475 55834685 + 7.31 0.000 intron (NM_198400, intron 17 of 21) AluJb|SINE|Alu 82551 NR_104302 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr8-6982 chr8 107865576 107865786 + 7.31 0.000 Intergenic L1PB1|LINE|L1 216258 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding GL000225.1-95 GL000225.1 102299 102509 + 7.31 0.000 NA NA NA NA chr11-9275 chr11 44708370 44708580 + 7.31 0.000 Intergenic MIRb|SINE|MIR -18487 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr1-15537 chr1 157414055 157414265 + 7.31 0.000 Intergenic Intergenic 138355 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr3-9895 chr3 83835365 83835575 + 7.31 0.000 Intergenic AluSq2|SINE|Alu 1034105 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr4-3389 chr4 30600081 30600291 + 7.31 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -120183 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr4-4615 chr4 78564263 78564473 + 7.31 0.000 intron (NM_005139, intron 2 of 12) intron (NM_005139, intron 2 of 12) 12598 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr22-4140 chr22 44671856 44672066 + 7.31 0.000 intron (NM_001017529, intron 1 of 7) intron (NM_001017529, intron 1 of 7) 3414 NM_001017528 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr9-5045 chr9 31432513 31432723 + 7.31 0.000 Intergenic Intergenic -51128 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr2-10861 chr2 62775741 62775951 + 7.31 0.000 intron (NM_001142615, intron 5 of 22) MIR|SINE|MIR 68949 NM_001354217 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr4-8235 chr4 138857610 138857820 + 7.31 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 154931 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr3-9502 chr3 50950528 50950738 + 7.31 0.000 intron (NM_004947, intron 5 of 52) L1MEd|LINE|L1 275553 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr5-7807 chr5 66060685 66060895 + 7.31 0.000 intron (NM_001006600, intron 21 of 23) L1PA4|LINE|L1 -83510 NM_001077199 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding chr2-10602 chr2 3199623 3199833 + 7.31 0.000 intron (NM_003310, intron 5 of 8) intron (NM_003310, intron 5 of 8) -73702 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr11-9278 chr11 44755957 44756167 + 7.31 0.000 intron (NM_130783, intron 1 of 9) intron (NM_130783, intron 1 of 9) 29100 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr1-12962 chr1 153693447 153693657 + 7.31 0.000 3' UTR (NM_000906, exon 22 of 22) 3' UTR (NM_000906, exon 22 of 22) -3759 NR_107050 102466879 NR_107050 ENSG00000274940 MIR8083 hsa-mir-8083 microRNA 8083 ncRNA chr2-12377 chr2 52875944 52876154 + 7.31 0.000 Intergenic Intergenic -173434 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr13-4125 chr13 81726401 81726611 + 7.31 0.000 Intergenic LTR27E|LTR|ERV1 -499523 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr22-4177 chr22 45532878 45533088 + 7.31 0.000 intron (NM_006487, intron 5 of 14) intron (NM_006487, intron 5 of 14) 30100 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr12-4438 chr12 10237409 10237619 + 7.31 0.000 Intergenic LTR28B|LTR|ERV1 -1447 NM_001351060 3824 Hs.562457 NM_002262 ENSG00000134539 KLRD1 CD94 killer cell lectin like receptor D1 protein-coding chr2-13322 chr2 131869641 131869851 + 7.31 0.000 Intergenic MLT2A2|LTR|ERVL -68085 NR_161366 408029 Hs.145567 NR_161366 C2orf27B - chromosome 2 open reading frame 27B ncRNA chr12-8061 chr12 116199427 116199637 + 7.31 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) -50878 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr17-7405 chr17 8896345 8896555 + 7.31 0.000 intron (NM_001142633, intron 5 of 18) intron (NM_001142633, intron 5 of 18) 16067 NM_014308 23533 Hs.278901 NM_014308 ENSG00000141506 PIK3R5 F730038I15Rik|FOAP-2|P101-PI3K|p101 phosphoinositide-3-kinase regulatory subunit 5 protein-coding chr6-7086 chr6 33983931 33984141 + 7.31 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 16015 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr10-4138 chr10 78471496 78471706 + 7.31 0.000 Intergenic L2a|LINE|L2 204259 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr4-5840 chr4 106766569 106766779 + 7.31 0.000 Intergenic Intergenic 269639 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr11-10254 chr11 101767494 101767704 + 7.31 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -147411 NM_001363543 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr9-5890 chr9 132019182 132019392 + 7.31 0.000 intron (NM_001253881, intron 2 of 6) intron (NM_001253881, intron 2 of 6) 60580 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr7-9232 chr7 120401607 120401817 + 7.31 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 128537 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr6-8055 chr6 121494292 121494502 + 7.31 0.000 Intergenic MER4E1|LTR|ERV1 58751 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr4-3558 chr4 185970158 185970368 + 7.31 0.000 Intergenic LTR1D|LTR|ERV1 -13891 NM_001270771 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr2-10322 chr2 150789250 150789460 + 7.31 0.000 Intergenic Intergenic 160458 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr8-5102 chr8 56836374 56836584 + 7.31 0.000 Intergenic Intergenic 157388 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr6-6905 chr6 13426391 13426601 + 7.31 0.000 intron (NM_018988, intron 1 of 1) intron (NM_018988, intron 1 of 1) -18359 NM_001242630 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr19-5110 chr19 56455444 56455654 + 7.31 0.000 intron (NM_001321355, intron 4 of 5) L1MA5|LINE|L1 21796 NM_001321356 63934 Hs.676605 NM_022103 ENSG00000198046 ZNF667 MIPU1 zinc finger protein 667 protein-coding chr1-7850 chr1 83660431 83660641 + 7.31 0.000 intron (NR_119375, intron 2 of 2) intron (NR_119375, intron 2 of 2) 200010 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr18-2433 chr18 24767041 24767251 + 7.31 0.000 TTS (NR_134604) TTS (NR_134604) 41365 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chr7-7472 chr7 94088812 94089022 + 7.31 0.000 Intergenic Intergenic -84562 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr9-5615 chr9 117413472 117413682 + 7.31 0.000 intron (NM_014010, intron 1 of 21) CpG 1480 NM_001365068 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr2-13940 chr2 184706259 184706469 + 7.31 0.000 intron (NM_194250, intron 1 of 3) ERVL-B4-int|LTR|ERVL 107835 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr9-5502 chr9 104524190 104524400 + 7.31 0.000 Intergenic THE1B|LTR|ERVL-MaLR 2914 NM_001001919 138804 Hs.553601 NM_001001919 ENSG00000148136 OR13C4 HSHTPCRX17|HTPCRX17|OR2K1|OR37F|OR9-7 olfactory receptor family 13 subfamily C member 4 protein-coding chr13-3997 chr13 68517188 68517398 + 7.31 0.000 Intergenic LTR16A|LTR|ERVL 368032 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr18-3551 chr18 76806627 76806837 + 7.31 0.000 intron (NR_040024, intron 2 of 2) MER20|DNA|hAT-Charlie 15563 NR_040024 100131655 Hs.385806 NR_040024 ENSG00000264278 ZNF236-DT - ZNF236 divergent transcript ncRNA chr6-5693 chr6 118137058 118137268 + 7.31 0.000 intron (NM_001029858, intron 1 of 7) intron (NM_001029858, intron 1 of 7) 51260 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr16-6387 chr16 53375095 53375305 + 7.31 0.000 intron (NR_119378, intron 1 of 2) AluSp|SINE|Alu 1707 NR_119378 102723373 Hs.569678 NR_119378 ENSG00000261804 LOC102723373 - uncharacterized LOC102723373 ncRNA chr16-5498 chr16 11283560 11283770 + 7.31 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -2335 NM_002761 5619 Hs.2909 NM_002761 ENSG00000175646 PRM1 CT94.1|P1 protamine 1 protein-coding chr21-914 chr21 29119041 29119251 + 7.31 0.000 intron (NM_001286622, intron 6 of 8) HAL1|LINE|L1 -2844 NM_001371376 chr12-5180 chr12 104180728 104180938 + 7.31 0.000 Intergenic L2a|LINE|L2 -34946 NM_001093771 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr11-9175 chr11 35515254 35515464 + 7.31 0.000 intron (NM_001282675, intron 2 of 12) intron (NM_001282675, intron 2 of 12) 10257 NM_015430 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr3-9760 chr3 69762021 69762231 + 7.31 0.000 intron (NM_001354605, intron 1 of 9) intron (NM_001354605, intron 1 of 9) -1378 NM_001184967 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr1-14925 chr1 85303336 85303546 + 7.31 0.000 Intergenic Intergenic -26809 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr16-4710 chr16 82198870 82199080 + 7.31 0.000 Intergenic Intergenic -28751 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr11-7835 chr11 113758089 113758299 + 7.31 0.000 intron (NM_004724, intron 6 of 15) intron (NM_004724, intron 6 of 15) 15498 NM_004724 9183 Hs.503886 NM_004724 ENSG00000086827 ZW10 HZW10|KNTC1AP zw10 kinetochore protein protein-coding chr5-4267 chr5 139949966 139950176 + 7.31 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 93228 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr17-3126 chr17 31549586 31549796 + 7.31 0.000 Intergenic CpG -10305 NR_029710 406968 NR_029710 ENSG00000207614 MIR193A MIRN193|MIRN193A|mir-193a microRNA 193a ncRNA chr16-4161 chr16 6193550 6193760 + 7.31 0.000 intron (NM_018723, intron 1 of 15) MIRb|SINE|MIR 173952 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr3-7121 chr3 183614053 183614263 + 7.31 0.000 Intergenic Intergenic -21465 NM_001349425 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding chr1-12900 chr1 113101586 113101796 + 7.31 0.000 intron (NM_014813, intron 11 of 17) MIR|SINE|MIR 28493 NM_001312686 9860 Hs.448972 NM_014813 ENSG00000198799 LRIG2 LIG-2|LIG2|UFS2 leucine rich repeats and immunoglobulin like domains 2 protein-coding chr8-6933 chr8 103760875 103761085 + 7.31 0.000 intron (NM_001348496, intron 3 of 23) intron (NM_001348496, intron 3 of 23) -58240 NM_001348501 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr7-4717 chr7 49910984 49911194 + 7.31 0.000 intron (NR_136188, intron 2 of 3) intron (NR_136188, intron 2 of 3) 135756 NR_136188 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr17-4796 chr17 49452122 49452332 + 7.31 0.000 Intergenic Intergenic 9522 NR_110805 101927207 Hs.638402 NR_110805 ENSG00000249497 LINC02075 - long intergenic non-protein coding RNA 2075 ncRNA chr4-8498 chr4 160085928 160086138 + 7.31 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -308249 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr10-7576 chr10 18139620 18139830 + 7.31 0.000 promoter-TSS (NM_201572) promoter-TSS (NM_201572) -699 NM_201596 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr7-5535 chr7 45260127 45260337 + 7.31 0.000 Intergenic Intergenic 102441 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr15-4790 chr15 71577211 71577421 + 7.31 0.000 intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 30080 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr14-2179 chr14 96275502 96275712 + 7.31 0.000 Intergenic Intergenic 19397 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr18-1647 chr18 58016201 58016411 + 7.31 0.000 Intergenic MER91A|DNA|hAT-Tip100 -27920 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr10-3029 chr10 113441332 113441542 + 7.31 0.000 Intergenic MIR|SINE|MIR -109394 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr8-5612 chr8 96386681 96386891 + 7.31 0.000 promoter-TSS (NR_125829) promoter-TSS (NR_125829) -138 NR_125829 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr6-2568 chr6 44039468 44039678 + 7.31 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 35079 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr15-1953 chr15 34012744 34012954 + 7.31 0.000 intron (NM_020371, intron 1 of 5) intron (NM_020371, intron 1 of 5) 26355 NM_020371 57099 Hs.555966 NM_020371 ENSG00000169857 AVEN PDCD12 apoptosis and caspase activation inhibitor protein-coding chr7-9221 chr7 118435044 118435254 + 7.31 0.000 Intergenic Intergenic 210445 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr17-6534 chr17 35612932 35613142 + 7.31 0.000 intron (NM_001030006, intron 5 of 21) intron (NM_001030006, intron 5 of 21) 25715 NM_001282 163 Hs.514819 NM_001282 ENSG00000006125 AP2B1 ADTB2|AP105B|AP2-BETA|CLAPB1 adaptor related protein complex 2 subunit beta 1 protein-coding chr10-6860 chr10 28126582 28126792 + 7.31 0.000 intron (NR_134518, intron 5 of 16) intron (NR_134518, intron 5 of 16) -53309 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr3-9397 chr3 48081692 48081902 + 7.31 0.000 intron (NM_002375, intron 1 of 18) L1MD3|LINE|L1 7051 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr17-2929 chr17 50117224 50117434 + 7.31 0.000 intron (NM_174920, intron 4 of 10) CpG 12831 NM_174920 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr14-3280 chr14 81829481 81829691 + 7.31 0.000 Intergenic LTR12C|LTR|ERV1 -86448 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA chr1-10584 chr1 175625963 175626173 + 7.31 0.000 intron (NM_003285, intron 1 of 22) THE1A|LTR|ERVL-MaLR 117527 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr21-669 chr21 44470662 44470872 + 7.31 0.000 Intergenic Intergenic -14804 NR_155204 111216286 Hs.572852 NR_155204 LINC02575 - long intergenic non-protein coding RNA 2575 ncRNA chr5-8342 chr5 119323523 119323733 + 7.31 0.000 intron (NM_001286815, intron 2 of 2) intron (NM_001286815, intron 2 of 2) -9547 NM_001286814 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr1-9374 chr1 30169465 30169675 + 7.31 0.000 Intergenic Intergenic -131958 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr12-7687 chr12 89244835 89245045 + 7.31 0.000 Intergenic L3b|LINE|CR1 107561 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr10-4998 chr10 31988047 31988257 + 7.31 0.000 Intergenic L1PA10|LINE|L1 -59276 NM_001270695 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr20-4533 chr20 63907154 63907364 + 7.31 0.000 intron (NM_025219, intron 1 of 4) MIR|SINE|MIR 12133 NM_025219 80331 Hs.164419 NM_025219 ENSG00000101152 DNAJC5 CLN4|CLN4B|CSP|DNAJC5A|NCL|mir-941-2|mir-941-3|mir-941-4|mir-941-5 DnaJ heat shock protein family (Hsp40) member C5 protein-coding chr14-4793 chr14 65580195 65580405 + 7.31 0.000 intron (NM_178156, intron 2 of 9) Tigger3a|DNA|TcMar-Tigger 109198 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr20-3466 chr20 55602734 55602944 + 7.31 0.000 Intergenic Intergenic -175642 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA chr19-5028 chr19 48462775 48462985 + 7.31 0.000 intron (NM_013348, intron 2 of 2) intron (NM_013348, intron 2 of 2) -6328 NM_017457 9266 Hs.144011 NM_004228 ENSG00000105443 CYTH2 ARNO|CTS18|CTS18.1|PSCD2|PSCD2L|SEC7L|Sec7p-L|Sec7p-like|cytohesin-2 cytohesin 2 protein-coding chr1-9095 chr1 16291080 16291290 + 7.31 0.000 intron (NM_018994, intron 4 of 9) intron (NM_018994, intron 4 of 9) -54002 NM_030907 79363 Hs.546430 NM_030907 ENSG00000132881 CPLANE2 C1orf89|RSG1 ciliogenesis and planar polarity effector 2 protein-coding chr15-2249 chr15 38281526 38281736 + 7.31 0.000 intron (NM_152594, intron 1 of 6) AluJr|SINE|Alu 28795 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr5-4737 chr5 44887363 44887573 + 7.31 0.000 Intergenic AluSg7|SINE|Alu 78521 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr22-2918 chr22 46623320 46623530 + 7.31 0.000 intron (NM_015124, intron 1 of 18) AluYf1|SINE|Alu 3039 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr2-5313 chr2 74254209 74254419 + 7.31 0.000 intron (NM_133478, intron 14 of 30) L2b|LINE|L2 55699 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr22-2500 chr22 22712123 22712333 + 7.31 0.000 Intergenic Intergenic 65916 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr11-7571 chr11 31196399 31196609 + 7.31 0.000 intron (NM_001367979, intron 9 of 38) MER21C|LTR|ERVL 173235 NM_001367979 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr3-7984 chr3 178441594 178441804 + 7.31 0.000 intron (NR_046786, intron 1 of 2) intron (NR_046786, intron 1 of 2) 22498 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr5-6939 chr5 138766407 138766617 + 7.31 0.000 intron (NM_001323982, intron 2 of 18) intron (NM_001323982, intron 2 of 18) -12588 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr12-4929 chr12 68821870 68822080 + 7.31 0.000 intron (NM_001145339, intron 5 of 8) AluJo|SINE|Alu 12951 NM_001145337 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding chr7-5917 chr7 98236373 98236583 + 7.31 0.000 intron (NM_015395, intron 10 of 25) intron (NM_015395, intron 10 of 25) 15754 NM_015395 25851 Hs.592281 NM_015395 ENSG00000205356 TECPR1 - tectonin beta-propeller repeat containing 1 protein-coding chr22-4147 chr22 44808127 44808337 + 7.31 0.000 intron (NM_181335, intron 3 of 11) intron (NM_181335, intron 3 of 11) 55674 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr11-5995 chr11 20546381 20546591 + 7.31 0.000 Intergenic Intergenic -52914 NM_001318369 9152 Hs.136557 NM_004211 ENSG00000165970 SLC6A5 GLYT-2|GLYT2|HKPX3|NET1 solute carrier family 6 member 5 protein-coding chr18-1075 chr18 37335323 37335533 + 7.31 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 60968 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr6-7785 chr6 97492526 97492736 + 7.31 0.000 intron (NR_110757, intron 1 of 4) intron (NR_110757, intron 1 of 4) 187045 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr3-8441 chr3 118341561 118341771 + 7.31 0.000 Intergenic Intergenic -300102 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr9-3398 chr9 130548099 130548309 + 7.31 0.000 Intergenic Intergenic 31290 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr12-7819 chr12 99629031 99629241 + 7.31 0.000 intron (NM_152788, intron 9 of 25) MER58A|DNA|hAT-Charlie -18617 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr2-7356 chr2 1823170 1823380 + 7.31 0.000 intron (NM_015025, intron 21 of 24) intron (NM_015025, intron 21 of 24) -78760 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr15-1833 chr15 43208126 43208336 + 7.31 0.000 exon (NM_000119, exon 8 of 13) exon (NM_000119, exon 8 of 13) 12787 NM_000119 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chrX-3117 chrX 6129817 6130027 + 7.31 0.000 intron (NM_001282145, intron 3 of 6) AluJr|SINE|Alu -96436 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr1-5786 chr1 169676131 169676341 + 7.31 0.000 Intergenic Intergenic 32621 NR_029467 6402 Hs.728756 NM_000655 ENSG00000188404 SELL CD62L|LAM1|LECAM1|LEU8|LNHR|LSEL|LYAM1|PLNHR|TQ1 selectin L protein-coding chr3-11029 chr3 182092160 182092370 + 7.31 0.000 Intergenic Intergenic 139901 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr7-9673 chr7 152590693 152590903 + 7.31 0.000 Intergenic Intergenic 85343 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr4-8375 chr4 148998831 148999041 + 7.31 0.000 Intergenic AluJb|SINE|Alu -56558 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr6-5256 chr6 137137577 137137787 + 7.31 0.000 Intergenic L1MA9|LINE|L1 35962 NM_181310 116379 Hs.126891 NM_052962 ENSG00000164485 IL22RA2 CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16 interleukin 22 receptor subunit alpha 2 protein-coding chr6-4541 chr6 40530030 40530240 + 7.31 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 57229 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr11-6243 chr11 49217479 49217689 + 7.31 0.000 Intergenic L2c|LINE|L2 -8982 NM_004476 2346 Hs.551896 NM_004476 ENSG00000086205 FOLH1 FGCP|FOLH|GCP2|GCPII|NAALAD1|NAALAdase|PSM|PSMA|mGCP folate hydrolase 1 protein-coding chrX-3686 chrX 107549244 107549454 + 7.31 0.000 intron (NM_032428, intron 6 of 15) AluSx|SINE|Alu -3528 NR_046750 100874122 Hs.600967 NR_046750 ENSG00000227610 FRMPD3-AS1 - FRMPD3 antisense RNA 1 ncRNA chr20-2598 chr20 38589150 38589360 + 7.31 0.000 TTS (NM_001018082) TTS (NM_001018082) 8058 NM_001018082 149685 Hs.368028 NM_174906 ENSG00000182035 ADIG SMAF1 adipogenin protein-coding chr16-3775 chr16 29641311 29641521 + 7.31 0.000 Intergenic AluSx1|SINE|Alu -21534 NM_001030288 6693 Hs.632188 NM_003123 ENSG00000197471 SPN CD43|GALGP|GPL115|LSN sialophorin protein-coding chr3-4396 chr3 196025325 196025535 + 7.31 0.000 Intergenic Intergenic -35151 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr8-2354 chr8 26693868 26694078 + 7.31 0.000 Intergenic Intergenic 115568 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr3-10324 chr3 126981937 126982147 + 7.31 0.000 Intergenic Intergenic -6552 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr4-3537 chr4 167337162 167337372 + 7.31 0.000 Intergenic Intergenic -102677 NM_001251967 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr4-6166 chr4 39579847 39580057 + 7.31 0.000 intron (NM_174921, intron 2 of 4) intron (NM_174921, intron 2 of 4) 47169 NM_001317897 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr14-3998 chr14 36476315 36476525 + 7.31 0.000 intron (NR_138599, intron 2 of 3) AluY|SINE|Alu 37115 NR_161363 253970 Hs.509165 NM_001101341 ENSG00000229415 SFTA3 NANCI|SFTPH|SP-H|SPH surfactant associated 3 ncRNA chr6-2860 chr6 3341065 3341275 + 7.31 0.000 intron (NM_021945, intron 4 of 10) intron (NM_021945, intron 4 of 10) 82223 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr15-2658 chr15 75252337 75252547 + 7.31 0.000 Intergenic Intergenic -6116 NM_001164404 653641 Hs.540230 NM_001164404 ENSG00000167195 GOLGA6C - golgin A6 family member C protein-coding chr12-7969 chr12 110179428 110179638 + 7.31 0.000 intron (NR_144950, intron 11 of 18) AluJb|SINE|Alu 55176 NR_144950 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr12-7633 chr12 80946976 80947186 + 7.31 0.000 Intergenic Intergenic -9166 NM_004664 8825 Hs.144333 NM_004664 ENSG00000111052 LIN7A LIN-7A|LIN7|MALS-1|MALS1|TIP-33|VELI1 lin-7 homolog A, crumbs cell polarity complex component protein-coding chr4-7973 chr4 113181210 113181420 + 7.31 0.000 intron (NM_001354275, intron 3 of 43) intron (NM_001354275, intron 3 of 43) 29033 NR_107049 102465878 NR_107049 ENSG00000275810 MIR8082 hsa-mir-8082 microRNA 8082 ncRNA chrX-2556 chrX 100823797 100824007 + 7.31 0.000 exon (NM_001325, exon 5 of 14) exon (NM_001325, exon 5 of 14) 3539 NM_001306206 1478 Hs.132370 NM_001325 ENSG00000101811 CSTF2 CstF-64 cleavage stimulation factor subunit 2 protein-coding chr10-6324 chr10 116422505 116422715 + 7.31 0.000 Intergenic Intergenic -5237 NM_001011709 119548 Hs.276724 NM_001011709 ENSG00000203837 PNLIPRP3 - pancreatic lipase related protein 3 protein-coding chr5-6138 chr5 35284316 35284526 + 7.31 0.000 Intergenic LTR91|LTR|ERVL -53934 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr9-7034 chr9 121905685 121905895 + 7.31 0.000 intron (NM_001139442, intron 6 of 8) L1ME4a|LINE|L1 163005 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr3-10300 chr3 126146432 126146642 + 7.31 0.000 intron (NR_072979, intron 9 of 20) LTR101_Mam|LTR|ERVL -33528 NR_046383 100862662 Hs.633362 NR_046383 ENSG00000246022 ALDH1L1-AS2 - ALDH1L1 antisense RNA 2 ncRNA chr3-7676 chr3 40017303 40017513 + 7.31 0.000 intron (NM_001284424, intron 2 of 15) MIR3|SINE|MIR -82603 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr13-3838 chr13 48740980 48741190 + 7.31 0.000 Intergenic Intergenic 87156 NM_001308471 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr20-4075 chr20 38834626 38834836 + 7.31 0.000 intron (NM_015568, intron 1 of 10) Charlie1b|DNA|hAT-Charlie 29034 NM_001172735 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr10-3780 chr10 125596796 125597006 + 7.31 0.000 intron (NM_001318133, intron 3 of 3) MIR|SINE|MIR 22530 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr7-5172 chr7 6839791 6840001 + 7.31 0.000 Intergenic SATR1|Satellite|Satellite -13601 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr7-9628 chr7 150683959 150684169 + 7.31 0.000 Intergenic Intergenic -1642 NM_015660 26157 Hs.647071 NM_015660 ENSG00000106560 GIMAP2 HIMAP2|IAN12|IMAP2 GTPase, IMAP family member 2 protein-coding chr8-4692 chr8 139848575 139848785 + 7.31 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -145557 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr10-5078 chr10 44143650 44143860 + 7.31 0.000 Intergenic MIR|SINE|MIR -148995 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr4-7719 chr4 89685173 89685383 + 7.31 0.000 Intergenic Intergenic -151123 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr1-9299 chr1 26411484 26411694 + 7.31 0.000 intron (NM_024674, intron 2 of 3) CpG-709 772 NM_024674 79727 Hs.86154 NM_024674 ENSG00000131914 LIN28A CSDD1|LIN-28|LIN28|ZCCHC1|lin-28A lin-28 homolog A protein-coding chr4-4393 chr4 41783499 41783709 + 7.31 0.000 Intergenic AluY|SINE|Alu -34634 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding chr17-7972 chr17 48127422 48127632 + 7.31 0.000 Intergenic Intergenic 19942 NM_013323 29916 Hs.15827 NM_013323 ENSG00000002919 SNX11 - sorting nexin 11 protein-coding chr19-3344 chr19 8405105 8405315 + 7.31 0.000 TTS (NM_004218) TTS (NM_004218) -8093 NM_001005415 51257 Hs.631861 NM_016496 ENSG00000099785 MARCH2 HSPC240|MARCH-II|RNF172 membrane associated ring-CH-type finger 2 protein-coding chr2-10527 chr2 232475324 232475534 + 7.31 0.000 Intergenic Intergenic 12405 NM_004826 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr17-2850 chr17 28272041 28272251 + 7.31 0.000 Intergenic Intergenic 24702 NR_002181 23614 Hs.744962 NR_002181 ENSG00000265060 PPY2P PPY2 pancreatic polypeptide 2, pseudogene pseudo chr6-5151 chr6 125478146 125478356 + 7.31 0.000 Intergenic L2a|LINE|L2 -176284 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chr11-5554 chr11 98910281 98910491 + 7.31 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -110563 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr19-3726 chr19 42898718 42898928 + 7.31 0.000 Intergenic Intergenic 19071 NM_002782 5675 Hs.646353 NM_002782 ENSG00000170848 PSG6 PSBG-10|PSBG-12|PSBG-6|PSG10|PSGGB pregnancy specific beta-1-glycoprotein 6 protein-coding chr2-11474 chr2 232155816 232156026 + 7.31 0.000 intron (NR_046476, intron 8 of 20) AluY|SINE|Alu -16732 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr15-4194 chr15 24842640 24842850 + 7.31 0.000 intron (NM_001349459, intron 2 of 11) MER70B|LTR|ERVL -13767 NM_001349461 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr20-4079 chr20 39200472 39200682 + 7.31 0.000 Intergenic MIR|SINE|MIR 24171 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr3-4574 chr3 176754329 176754539 + 7.31 0.000 Intergenic Intergenic 62567 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr19-4146 chr19 30744716 30744926 + 7.31 0.000 Intergenic Intergenic 372437 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr16-6974 chr16 86379697 86379907 + 7.31 0.000 Intergenic Intergenic -34123 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr2-7540 chr2 22741508 22741718 + 7.31 0.000 Intergenic HERV16-int|LTR|ERVL 205134 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr12-5273 chr12 110005411 110005621 + 7.31 0.000 intron (NM_033121, intron 1 of 14) L1MB7|LINE|L1 6086 NM_033121 88455 Hs.528703 NM_033121 ENSG00000076513 ANKRD13A ANKRD13|NY-REN-25 ankyrin repeat domain 13A protein-coding chr2-14739 chr2 239138573 239138783 + 7.31 0.000 intron (NM_006037, intron 9 of 26) intron (NM_006037, intron 9 of 26) -52752 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr18-1506 chr18 2813747 2813957 + 7.31 0.000 Intergenic AluJr|SINE|Alu -33154 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr2-10578 chr2 240816750 240816960 + 7.31 0.000 intron (NM_004321, intron 1 of 46) intron (NM_004321, intron 1 of 46) 3364 NM_001320705 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr21-712 chr21 33324265 33324475 + 7.31 0.000 promoter-TSS (NM_000629) promoter-TSS (NM_000629) -600 NM_000629 3454 Hs.529400 NM_000629 ENSG00000142166 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon alpha and beta receptor subunit 1 protein-coding chrX-2747 chrX 128931104 128931314 + 7.31 0.000 Intergenic Intergenic 592281 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr11-6801 chr11 91613484 91613694 + 7.31 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -611445 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chrX-2503 chrX 94083009 94083219 + 7.31 0.000 Intergenic MIR|SINE|MIR 408908 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr7-9135 chr7 109991660 109991870 + 7.31 0.000 Intergenic L1PA16|LINE|L1 -31552 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr3-5928 chr3 43217539 43217749 + 7.31 0.000 Intergenic Intergenic -68868 NM_001100594 54861 Hs.476052 NM_017719 ENSG00000163788 SNRK HSNFRK SNF related kinase protein-coding chr22-3152 chr22 26447545 26447755 + 7.31 0.000 intron (NM_001349905, intron 13 of 13) intron (NM_001349905, intron 13 of 13) 18390 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr3-9030 chr3 21963270 21963480 + 7.31 0.000 intron (NR_046876, intron 2 of 3) intron (NR_046876, intron 2 of 3) 6236 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr14-5172 chr14 92154156 92154366 + 7.31 0.000 intron (NM_001322272, intron 9 of 15) intron (NM_001322272, intron 9 of 15) 32292 NM_001322270 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chrX-3968 chrX 12910701 12910911 + 7.31 0.000 intron (NM_016610, intron 2 of 2) intron (NM_016610, intron 2 of 2) 4186 NM_016610 51311 Hs.660543 NM_016610 ENSG00000101916 TLR8 CD288 toll like receptor 8 protein-coding chr16-4549 chr16 66049571 66049781 + 7.31 0.000 Intergenic Intergenic -317015 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr9-3789 chr9 127256852 127257062 + 7.31 0.000 Intergenic L1MD1|LINE|L1 -6705 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr12-8116 chr12 119909362 119909572 + 7.31 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -32147 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr10-8418 chr10 84902697 84902907 + 7.31 0.000 Intergenic MIRb|SINE|MIR 296103 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr6-2514 chr6 149822500 149822710 + 7.31 0.000 intron (NM_032832, intron 6 of 6) MIR|SINE|MIR -40893 NR_045126 100652739 Hs.642734 NR_045126 ENSG00000223701 RAET1E-AS1 RAET1G-AS1 RAET1E antisense RNA 1 ncRNA chr2-7444 chr2 11659861 11660071 + 7.31 0.000 intron (NM_012344, intron 3 of 3) intron (NM_012344, intron 3 of 3) 10229 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr17-6476 chr17 19612219 19612429 + 7.31 0.000 Intergenic HAL1ME|LINE|L1 -35826 NM_001369138 224 Hs.499886 NM_000382 ENSG00000072210 ALDH3A2 ALDH10|FALDH|SLS aldehyde dehydrogenase 3 family member A2 protein-coding chr11-5056 chr11 104898363 104898573 + 7.31 0.000 non-coding (NR_034070, exon 1 of 9) non-coding (NR_034070, exon 1 of 9) 202 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr2-7849 chr2 48163101 48163311 + 7.31 0.000 Intergenic Tigger12|DNA|TcMar-Tigger -151476 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr17-5954 chr17 76420008 76420218 + 7.31 0.000 intron (NM_022066, intron 1 of 17) intron (NM_022066, intron 1 of 17) 33039 NM_022066 63893 Hs.16130 NM_022066 ENSG00000175931 UBE2O E2-230K ubiquitin conjugating enzyme E2 O protein-coding chr1-11068 chr1 226428639 226428849 + 7.31 0.000 Intergenic Intergenic -20651 NM_001618 142 Hs.177766 NM_001618 ENSG00000143799 PARP1 ADPRT|ADPRT 1|ADPRT1|ARTD1|PARP|PARP-1|PPOL|pADPRT-1 poly(ADP-ribose) polymerase 1 protein-coding chr6-3894 chr6 63920902 63921112 + 7.31 0.000 intron (NM_001292009, intron 35 of 43) AluY|SINE|Alu 114171 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr18-2031 chr18 45728762 45728972 + 7.31 0.000 intron (NM_001146036, intron 3 of 10) intron (NM_001146036, intron 3 of 10) 1914 NM_001146037 6563 Hs.101307 NM_015865 ENSG00000141469 SLC14A1 HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE solute carrier family 14 member 1 (Kidd blood group) protein-coding chr16-2534 chr16 11298191 11298401 + 7.31 0.000 Intergenic AluJb|SINE|Alu 8231 NR_031678 100313773 NR_031678 ENSG00000221801 MIR548H2 MIR548H-2|MIRN548H2 microRNA 548h-2 ncRNA chr4-8374 chr4 148710161 148710371 + 7.31 0.000 Intergenic Intergenic 232112 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr6-5513 chr6 166135428 166135638 + 7.31 0.000 Intergenic L1PBa|LINE|L1 32318 NM_001366285 6862 Hs.389457 NM_003181 ENSG00000164458 TBXT SAVA|T|TFT T-box transcription factor T protein-coding chr17-3985 chr17 66941778 66941988 + 7.31 0.000 Intergenic Intergenic -22824 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr17-2530 chr17 27349150 27349360 + 7.31 0.000 Intergenic MER52D|LTR|ERV1 55141 NM_015626 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding chr17-6537 chr17 39064511 39064721 + 7.31 0.000 3' UTR (NM_020405, exon 14 of 14) 3' UTR (NM_020405, exon 14 of 14) 7597 NR_036551 100131347 Hs.676510 NR_036551 ENSG00000263818 RDM1P5 - RDM1 pseudogene 5 pseudo chr17-5360 chr17 30540698 30540908 + 7.31 0.000 Intergenic AluSx1|SINE|Alu -35662 NR_015341 107133515 Hs.568209 NR_015341 SMURF2P1-LRRC37BP1 - SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene pseudo chr4-5906 chr4 139604041 139604251 + 7.31 0.000 Intergenic Intergenic -47377 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr4-2083 chr4 26986346 26986556 + 7.31 0.000 intron (NM_001169118, intron 3 of 12) intron (NM_001169118, intron 3 of 12) 125610 NM_001169118 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chr10-8984 chr10 120091524 120091734 + 7.31 0.000 Intergenic Intergenic 133116 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr2-14544 chr2 230424312 230424522 + 7.31 0.000 intron (NM_001080391, intron 2 of 28) AluSx1|SINE|Alu 7661 NM_001206704 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr4-6560 chr4 183638615 183638825 + 7.31 0.000 TTS (NM_001307922) TTS (NM_001307922) 20465 NM_001307922 201965 Hs.133337 NM_152682 ENSG00000182552 RWDD4 FAM28A|RWDD4A RWD domain containing 4 protein-coding chr4-1054 chr4 77983704 77983914 + 7.31 0.000 Intergenic SVA_D|Retroposon|SVA -73514 NM_025074 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr8-6645 chr8 78793232 78793442 + 7.31 0.000 intron (NM_001199886, intron 2 of 4) intron (NM_001199886, intron 2 of 4) 12126 NM_000880 3574 Hs.591873 NM_000880 ENSG00000104432 IL7 IL-7 interleukin 7 protein-coding chr16-3597 chr16 74563825 74564035 + 7.31 0.000 intron (NR_027264, intron 1 of 26) AluJr|SINE|Alu 43184 NM_012201 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr16-3829 chr16 57938162 57938372 + 7.31 0.000 intron (NM_001297, intron 16 of 32) L2b|LINE|L2 32861 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr20-1637 chr20 19141989 19142199 + 7.31 0.000 Intergenic LTR50|LTR|ERVL -70548 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr2-11164 chr2 148749026 148749236 + 7.31 0.000 intron (NM_015630, intron 3 of 13) intron (NM_015630, intron 3 of 13) 104380 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr14-4464 chr14 34424552 34424762 + 7.31 0.000 Intergenic HERVL40-int|LTR|ERVL 37583 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr20-3594 chr20 4705994 4706204 + 7.31 0.000 Intergenic Intergenic -15810 NM_012409 23627 Hs.406696 NM_012409 ENSG00000171864 PRND DOPPEL|DPL|PrPLP|dJ1068H6.4 prion like protein doppel protein-coding chr3-5211 chr3 76885718 76885928 + 7.31 0.000 Intergenic Intergenic -154276 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chrX-4025 chrX 17265082 17265292 + 7.31 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -110013 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr17-6797 chr17 5759399 5759609 + 7.31 0.000 Intergenic Intergenic -12730 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr7-5462 chr7 40733981 40734191 + 7.31 0.000 intron (NM_024728, intron 13 of 14) intron (NM_024728, intron 13 of 14) 245853 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr8-5109 chr8 61767278 61767488 + 7.31 0.000 Intergenic Intergenic 52595 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr6-3814 chr6 34238066 34238276 + 7.31 0.000 promoter-TSS (NM_145905) promoter-TSS (NM_145905) -620 NM_145905 3159 Hs.518805 NM_002131 ENSG00000137309 HMGA1 HMG-R|HMGA1A|HMGIY high mobility group AT-hook 1 protein-coding chr11-9313 chr11 45815730 45815940 + 7.31 0.000 Intergenic Intergenic 10745 NM_018389 55343 Hs.12211 NM_018389 ENSG00000181830 SLC35C1 CDG2C|FUCT1 solute carrier family 35 member C1 protein-coding chr6-7797 chr6 98130715 98130925 + 7.31 0.000 Intergenic Intergenic 106289 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr21-1693 chr21 29495690 29495900 + 7.31 0.000 promoter-TSS (NR_146594) promoter-TSS (NR_146594) -252 NR_146594 54147 Hs.124532 NR_146594 ENSG00000234293 BACH1-IT3 C21orf8|NCRNA00097 BACH1 intronic transcript 3 ncRNA chr20-2814 chr20 57748780 57748990 + 7.31 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -37349 NM_199171 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr4-8383 chr4 150115842 150116052 + 7.31 0.000 intron (NM_001040260, intron 2 of 15) L1PB3|LINE|L1 37502 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr17-5782 chr17 62414992 62415202 + 7.31 0.000 intron (NM_001144933, intron 11 of 11) AluSx1|SINE|Alu -8788 NM_181725 339175 Hs.381204 NM_181725 ENSG00000087995 METTL2A METTL2 methyltransferase like 2A protein-coding chr3-9589 chr3 55957418 55957628 + 7.31 0.000 intron (NR_132749, intron 11 of 17) MER52A|LTR|ERV1 -104929 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chrX-2708 chrX 120423910 120424120 + 7.31 0.000 Intergenic Intergenic 45334 NM_013995 3920 Hs.496684 NM_002294 ENSG00000005893 LAMP2 CD107b|LAMP-2|LAMPB|LGP-96|LGP110 lysosomal associated membrane protein 2 protein-coding chr2-6411 chr2 136065538 136065748 + 7.31 0.000 Intergenic Intergenic 50592 NM_001008540 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr3-7854 chr3 123161378 123161588 + 7.31 0.000 promoter-TSS (NR_106960) promoter-TSS (NR_106960) -311 NR_106960 102465667 NR_106960 ENSG00000284421 MIR7110 hsa-mir-7110 microRNA 7110 ncRNA chr10-6589 chr10 81527678 81527888 + 7.31 0.000 Intergenic Intergenic -347411 NM_001370083 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr12-4865 chr12 61292096 61292306 + 7.31 0.000 Intergenic L1PREC2|LINE|L1 900638 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr4-5873 chr4 125639632 125639842 + 7.31 0.000 Intergenic MLT2B2|LTR|ERVL 132478 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr6-7643 chr6 81216647 81216857 + 7.31 0.000 Intergenic AluJr|SINE|Alu 535929 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr7-4921 chr7 131948771 131948981 + 7.31 0.000 TTS (NR_110836) TTS (NR_110836) 38656 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr1-15765 chr1 174319183 174319393 + 7.31 0.000 intron (NM_001366445, intron 11 of 13) L1MC|LINE|L1 44188 NM_001366449 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr10-8429 chr10 85738748 85738958 + 7.31 0.000 intron (NM_017551, intron 8 of 15) L1ME1|LINE|L1 161122 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr1-14461 chr1 47296939 47297149 + 7.31 0.000 intron (NM_001282938, intron 8 of 18) L2c|LINE|L2 17103 NM_001282937 6491 Hs.525198 NM_003035 ENSG00000123473 STIL MCPH7|SIL STIL centriolar assembly protein protein-coding chr8-4778 chr8 143618202 143618412 + 7.31 0.000 promoter-TSS (NM_001317783).2 promoter-TSS (NM_001317783).2 -758 NM_001317783 7264 Hs.404119 NM_003313 ENSG00000104522 TSTA3 FX|P35B|SDR4E1 tissue specific transplantation antigen P35B protein-coding chr3-5065 chr3 42438414 42438624 + 7.31 0.000 Intergenic Intergenic -27909 NM_001304386 131375 Hs.234895 NM_144634 ENSG00000157093 LYZL4 LYC4|LYZA lysozyme like 4 protein-coding chr7-8586 chr7 66581253 66581463 + 7.31 0.000 intron (NR_111976, intron 1 of 3) MER21A|LTR|ERVL 11049 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr19-6115 chr19 3789132 3789342 + 7.31 0.000 intron (NM_002378, intron 2 of 13) MER113|DNA|hAT-Charlie -2856 NM_139354 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr22-2948 chr22 48535694 48535904 + 7.31 0.000 intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) 11588 NR_038917 284933 Hs.159057 NR_038917 ENSG00000281732 LOC284933 - uncharacterized LOC284933 ncRNA chr2-4775 chr2 30327795 30328005 + 7.31 0.000 Intergenic MER20B|DNA|hAT-Charlie -18746 NR_122048 285043 Hs.429119 NR_122048 LINC01936 - long intergenic non-protein coding RNA 1936 ncRNA chr3-8868 chr3 10304867 10305077 + 7.31 0.000 intron (NM_001136232, intron 7 of 8) intron (NM_001136232, intron 7 of 8) -12025 NM_001302824 51738 Hs.590080 NM_016362 ENSG00000157017 GHRL MTLRP ghrelin and obestatin prepropeptide protein-coding chr20-3856 chr20 25542275 25542485 + 7.31 0.000 intron (NM_025176, intron 1 of 23) L1M4|LINE|L1 43151 NM_025176 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr12-3910 chr12 126474978 126475188 + 7.31 0.000 Intergenic AluSx|SINE|Alu -25756 NR_147498 283435 Hs.667334 NR_147498 LINC02825 - long intergenic non-protein coding RNA 2825 ncRNA chr12-5267 chr12 109783406 109783616 + 7.31 0.000 3' UTR (NM_147204, exon 14 of 14) 3' UTR (NM_147204, exon 14 of 14) -10024 NR_026662 84983 Hs.675961 NM_032897 ENSG00000255650 FAM222A-AS1 - FAM222A antisense RNA 1 ncRNA chr6-5297 chr6 141721821 141722031 + 7.31 0.000 Intergenic HERVL40-int|LTR|ERVL 366873 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr3-2821 chr3 13657931 13658141 + 7.31 0.000 intron (NR_027103, intron 1 of 5) intron (NR_027103, intron 1 of 5) 7315 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr17-4786 chr17 47554836 47555046 + 7.31 0.000 intron (NM_001330257, intron 3 of 23) Tigger7|DNA|TcMar-Tigger 23833 NM_006310 9520 Hs.443837 NM_006310 ENSG00000141279 NPEPPS AAP-S|MP100|PSA aminopeptidase puromycin sensitive protein-coding chr20-882 chr20 23606647 23606857 + 7.31 0.000 promoter-TSS (NM_001008693) promoter-TSS (NM_001008693) -779 NM_001008693 128822 Hs.698020 NM_001008693 ENSG00000173335 CST9 CLM|CTES7A cystatin 9 protein-coding chr20-4306 chr20 51186924 51187134 + 7.31 0.000 Intergenic Intergenic -163922 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr5-8837 chr5 151106094 151106304 + 7.31 0.000 intron (NM_001193544, intron 22 of 24) intron (NM_001193544, intron 22 of 24) -18514 NM_001252390 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr1-4362 chr1 109960471 109960681 + 7.31 0.000 Intergenic Intergenic -24189 NM_001242673 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr16-4642 chr16 74073488 74073698 + 7.31 0.000 Intergenic Intergenic 141928 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr8-7023 chr8 110524724 110524934 + 7.31 0.000 Intergenic L1MC3|LINE|L1 502604 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr5-4753 chr5 52845394 52845604 + 7.31 0.000 intron (NM_181501, intron 1 of 28) MER5A1|DNA|hAT-Charlie 57583 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr2-10931 chr2 75310950 75311160 + 7.31 0.000 Intergenic Intergenic -111535 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr8-4577 chr8 128201981 128202191 + 7.31 0.000 Intergenic Intergenic 51970 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr19-4782 chr19 33266853 33267063 + 7.31 0.000 Intergenic Intergenic 35576 NM_001287424 1050 Hs.76171 NM_004364 ENSG00000245848 CEBPA C/EBP-alpha|CEBP CCAAT enhancer binding protein alpha protein-coding chr1-7228 chr1 224300556 224300766 + 7.31 0.000 exon (NM_001243146, exon 8 of 21) exon (NM_001243146, exon 8 of 21) 29511 NM_002533 4931 Hs.497867 NM_002533 ENSG00000143748 NVL NVL2 nuclear VCP like protein-coding chr15-2936 chr15 47405134 47405344 + 7.31 0.000 intron (NM_001198999, intron 1 of 19) intron (NM_001198999, intron 1 of 19) 221150 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr3-10160 chr3 115905139 115905349 + 7.31 0.000 promoter-TSS (NR_145779) promoter-TSS (NR_145779) -118 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr11-4335 chr11 72421364 72421574 + 7.31 0.000 intron (NM_001258394, intron 2 of 17) L2c|LINE|L2 13062 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr14-2289 chr14 56993598 56993808 + 7.31 0.000 Intergenic L1MB4|LINE|L1 180545 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA chr14-5405 chr14 104246588 104246798 + 7.31 0.000 TTS (NR_146611) TTS (NR_146611) 23109 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr10-7403 chr10 3756686 3756896 + 7.31 0.000 Intergenic Intergenic 28418 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr12-7055 chr12 40729277 40729487 + 7.31 0.000 intron (NM_001256063, intron 1 of 15) intron (NM_001256063, intron 1 of 15) 36940 NM_001256063 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr15-5144 chr15 90749780 90749990 + 7.31 0.000 exon (NM_001287247, exon 3 of 20) exon (NM_001287247, exon 3 of 20) 32539 NM_001287248 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|MGRISCE1|RECQ2|RECQL2|RECQL3 BLM RecQ like helicase protein-coding chr3-3804 chr3 15332554 15332764 + 7.31 0.000 promoter-TSS (NM_004844) promoter-TSS (NM_004844) -73 NM_004844 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr6-4829 chr6 82907126 82907336 + 7.31 0.000 intron (NR_146807, intron 10 of 10) intron (NR_146807, intron 10 of 10) 158610 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr16-2358 chr16 55471558 55471768 + 7.31 0.000 Intergenic L2b|LINE|L2 -7167 NM_001302508 4313 Hs.513617 NM_004530 ENSG00000087245 MMP2 CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1 matrix metallopeptidase 2 protein-coding chr3-7979 chr3 177049920 177050130 + 7.31 0.000 exon (NM_001321193, exon 7 of 16) exon (NM_001321193, exon 7 of 16) 146453 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr1-15317 chr1 119075630 119075840 + 7.31 0.000 intron (NM_015836, intron 2 of 5) intron (NM_015836, intron 2 of 5) 28330 NR_126447 104472716 Hs.689536 NR_126447 WARS2-IT1 - WARS2 intronic transcript 1 ncRNA chr3-10943 chr3 175790663 175790873 + 7.31 0.000 intron (NM_207015, intron 13 of 13) Tigger13a|DNA|TcMar-Tigger -14435 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr3-10717 chr3 153865776 153865986 + 7.31 0.000 Intergenic L1MA2|LINE|L1 -103355 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr10-8446 chr10 86328184 86328394 + 7.31 0.000 intron (NM_017551, intron 2 of 15) L1ME3G|LINE|L1 38506 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr20-636 chr20 50305234 50305444 + 7.31 0.000 intron (NR_034124, intron 2 of 4) intron (NR_034124, intron 2 of 4) 12619 NR_034124 284751 Hs.282325 NM_001025463 ENSG00000203999 LINC01270 - long intergenic non-protein coding RNA 1270 ncRNA chr10-7642 chr10 24619661 24619871 + 7.31 0.000 exon (NM_020824, exon 9 of 26) exon (NM_020824, exon 9 of 26) 3077 NR_160024 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr1-13013 chr1 161424151 161424361 + 7.31 0.000 Intergenic SVA_D|Retroposon|SVA -56373 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr2-11814 chr2 17301692 17301902 + 7.31 0.000 Intergenic Intergenic 216643 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr2-10990 chr2 99759914 99760124 + 7.31 0.000 intron (NM_001025108, intron 7 of 23) MIRb|SINE|MIR -270002 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr19-6300 chr19 8507253 8507463 + 7.31 0.000 Intergenic Intergenic -4718 NM_032152 84106 Hs.465812 NM_032152 ENSG00000133246 PRAM1 PML-RAR|PRAM-1 PML-RARA regulated adaptor molecule 1 protein-coding chr3-4880 chr3 172607879 172608089 + 7.31 0.000 Intergenic MLT2B4|LTR|ERVL -12377 NR_146714 105374219 Hs.186269 NR_146714 ENSG00000223387 LINC02068 - long intergenic non-protein coding RNA 2068 ncRNA chr3-9271 chr3 41175503 41175713 + 7.31 0.000 Intergenic Intergenic -23897 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr7-4567 chr7 6379632 6379842 + 7.31 0.000 intron (NM_006908, intron 1 of 5) AluSx|SINE|Alu 5210 NM_006908 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|MRD48|Rac-1|TC-25|p21-Rac1 Rac family small GTPase 1 protein-coding chr21-1221 chr21 45306589 45306799 + 7.31 0.000 Intergenic Intergenic 18642 NR_026943 642852 Hs.11637 NR_026943 ENSG00000223768 LINC00205 NCRNA00205 long intergenic non-protein coding RNA 205 ncRNA chr3-9073 chr3 27081297 27081507 + 7.31 0.000 Intergenic Intergenic 135121 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr10-7996 chr10 60771279 60771489 + 7.31 0.000 Intergenic Intergenic -6947 NM_001170406 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr3-9107 chr3 28905107 28905317 + 7.31 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 329934 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr1-12727 chr1 57623810 57624020 + 7.31 0.000 intron (NM_001353980, intron 4 of 5) MIRb|SINE|MIR -198994 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr1-10277 chr1 147849659 147849869 + 7.31 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -53031 NM_005267 2703 Hs.632441 NM_005267 ENSG00000121634 GJA8 CAE|CAE1|CTRCT1|CX50|CZP1|MP70 gap junction protein alpha 8 protein-coding chr20-2070 chr20 16130074 16130284 + 7.31 0.000 Intergenic MIRc|SINE|MIR -144297 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr4-8668 chr4 178923160 178923370 + 7.31 0.000 Intergenic MER52A|LTR|ERV1 -1015329 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr11-10717 chr11 131209343 131209553 + 7.31 0.000 Intergenic MIR|SINE|MIR -161167 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr9-7409 chr9 21017234 21017444 + 7.31 0.000 intron (NM_001321903, intron 3 of 8) Charlie13b|DNA|hAT-Charlie 14301 NM_001010915 401494 Hs.716678 NM_001010915 ENSG00000188921 HACD4 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 protein-coding chr17-8102 chr17 56501092 56501302 + 7.31 0.000 intron (NM_001370326, intron 20 of 20) L2a|LINE|L2 -92502 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr14-4711 chr14 58864976 58865186 + 7.31 0.000 intron (NR_110547, intron 1 of 5) intron (NR_110547, intron 1 of 5) 36793 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr3-8275 chr3 53085300 53085510 + 7.31 0.000 Intergenic Intergenic -39332 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr14-2769 chr14 104847000 104847210 + 7.31 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat -18163 NM_015005 283638 Hs.533721 NM_015005 ENSG00000099814 CEP170B CEP170R|FAM68C|KIAA0284 centrosomal protein 170B protein-coding chr21-1045 chr21 26553504 26553714 + 7.31 0.000 intron (NR_135515, intron 3 of 3) L1MEf|LINE|L1 19677 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr22-3927 chr22 36664018 36664228 + 7.31 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 38735 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr2-13104 chr2 113141692 113141902 + 7.31 0.000 Intergenic Intergenic 14199 NM_173842 3557 Hs.81134 NM_000577 ENSG00000136689 IL1RN DIRA|ICIL-1RA|IL-1RN|IL-1ra|IL-1ra3|IL1F3|IL1RA|IRAP|MVCD4 interleukin 1 receptor antagonist protein-coding chr2-14274 chr2 215403964 215404174 + 7.31 0.000 intron (NM_212482, intron 20 of 45) Charlie10b|DNA|hAT-Charlie 31999 NM_001365519 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr15-2264 chr15 48946024 48946234 + 7.31 0.000 intron (NM_203349, intron 1 of 11) intron (NM_203349, intron 1 of 11) 17790 NM_203349 399694 Hs.642615 NM_203349 ENSG00000185634 SHC4 RaLP|SHCD SHC adaptor protein 4 protein-coding chr9-7457 chr9 27172446 27172656 + 7.31 0.000 intron (NM_001290077, intron 4 of 21) L2b|LINE|L2 63410 NM_001290077 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr8-5655 chr8 111613686 111613896 + 7.31 0.000 Intergenic Intergenic 237152 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr5-6905 chr5 133368179 133368389 + 7.31 0.000 intron (NM_015082, intron 4 of 15) MER77|LTR|ERVL 59422 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr14-3784 chr14 57611988 57612198 + 7.31 0.000 intron (NM_001352014, intron 1 of 9) L1MEc|LINE|L1 -118236 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr10-5121 chr10 50224583 50224793 + 7.31 0.000 intron (NM_001143974, intron 6 of 18) MLT1J2|LTR|ERVL-MaLR 23922 NM_019893 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr9-5793 chr9 128588902 128589112 + 7.31 0.000 intron (NM_003127, intron 21 of 55) intron (NM_003127, intron 21 of 55) 36420 NM_001363759 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr22-2595 chr22 30528503 30528713 + 7.31 0.000 intron (NM_001193336, intron 8 of 11) AluJo|SINE|Alu 14046 NM_001353441 730005 Hs.505605 NM_001193336 ENSG00000214491 SEC14L6 - SEC14 like lipid binding 6 protein-coding chr11-10118 chr11 87801248 87801458 + 7.31 0.000 Intergenic L1PA7|LINE|L1 -81942 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr3-10216 chr3 121739876 121740086 + 7.31 0.000 intron (NM_001256486, intron 1 of 21) L1MD2|LINE|L1 9760 NM_001256486 2804 Hs.213389 NM_004487 ENSG00000173230 GOLGB1 GCP|GCP372|GOLIM1 golgin B1 protein-coding chr16-4700 chr16 81632620 81632830 + 7.31 0.000 intron (NM_030629, intron 3 of 20) intron (NM_030629, intron 3 of 20) 21377 NR_106759 102465251 NR_106759 ENSG00000275109 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA chr10-7876 chr10 48743542 48743752 + 7.31 0.000 intron (NM_020945, intron 12 of 61) intron (NM_020945, intron 12 of 61) 58184 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr5-4505 chr5 11212771 11212981 + 7.31 0.000 intron (NM_001288715, intron 9 of 20) intron (NM_001288715, intron 9 of 20) 376041 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr6-3380 chr6 43786768 43786978 + 7.31 0.000 TTS (NM_001171622) TTS (NM_001171622) 14905 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr19-3025 chr19 51491506 51491716 + 7.31 0.000 3' UTR (NM_033329, exon 7 of 7) 3' UTR (NM_033329, exon 7 of 7) 8782 NM_033329 89858 Hs.249741 NM_033329 ENSG00000254521 SIGLEC12 S2V|SIGLECL1|SLG|Siglec-XII sialic acid binding Ig like lectin 12 (gene/pseudogene) protein-coding chr18-2879 chr18 9950212 9950422 + 7.31 0.000 intron (NM_003574, intron 5 of 6) intron (NM_003574, intron 5 of 6) 36301 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr12-7994 chr12 111633756 111633966 + 7.31 0.000 Intergenic Penelope1_Vert|LINE|Penelope -34185 NR_132311 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr3-10985 chr3 178767960 178768170 + 7.31 0.000 intron (NR_126560, intron 2 of 7) intron (NR_126560, intron 2 of 7) 92340 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr11-6354 chr11 63887642 63887852 + 7.31 0.000 promoter-TSS (NM_017490) promoter-TSS (NM_017490) -790 NM_017490 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr4-7752 chr4 93546133 93546343 + 7.31 0.000 intron (NM_001286838, intron 12 of 14) L2a|LINE|L2 -282515 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr1-4033 chr1 199272789 199272999 + 7.31 0.000 intron (NR_147896, intron 3 of 3) intron (NR_147896, intron 3 of 3) 124296 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr5-5438 chr5 138075415 138075625 + 7.31 0.000 Intergenic AluSx|SINE|Alu -8372 NM_058244 7478 Hs.591274 NM_031933 ENSG00000061492 WNT8A WNT8D Wnt family member 8A protein-coding chr10-2224 chr10 72073054 72073264 + 7.31 0.000 intron (NM_014767, intron 2 of 11) intron (NM_014767, intron 2 of 11) 15392 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr9-7598 chr9 36814320 36814530 + 7.31 0.000 Intergenic L2c|LINE|L2 9174 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr13-2538 chr13 62471512 62471722 + 7.31 0.000 Intergenic MER68|LTR|ERVL 147960 NR_047038 100874180 Hs.7415 NR_047038 ENSG00000229307 LINC00459 - long intergenic non-protein coding RNA 459 ncRNA chr4-3036 chr4 136241779 136241989 + 7.31 0.000 Intergenic L1PBa|LINE|L1 -328204 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr7-3742 chr7 73303533 73303743 + 7.31 0.000 exon (NM_001168347, exon 9 of 10) exon (NM_001168347, exon 9 of 10) 5188 NM_148956 55695 Hs.510927 NM_018044 ENSG00000130305 NSUN5 NOL1|NOL1R|NSUN5A|WBSCR20|WBSCR20A|p120|p120(NOL1) NOP2/Sun RNA methyltransferase 5 protein-coding chr9-5091 chr9 34717332 34717542 + 7.31 0.000 Intergenic Intergenic -7301 NM_002989 6366 Hs.57907 NM_002989 ENSG00000137077 CCL21 6Ckine|CKb9|ECL|SCYA21|SLC|TCA4 C-C motif chemokine ligand 21 protein-coding chr3-10488 chr3 135329272 135329482 + 7.31 0.000 Intergenic Intergenic 534117 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr1-11232 chr1 246602261 246602471 + 7.31 0.000 intron (NM_152609, intron 2 of 10) MLT1F2|LTR|ERVL-MaLR 35910 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding chr6-7833 chr6 103903920 103904130 + 7.31 0.000 Intergenic L1PBa1|LINE|L1 955521 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr5-8237 chr5 110136129 110136339 + 7.31 0.000 Intergenic L1PA7|LINE|L1 253052 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr17-4670 chr17 21116427 21116637 + 7.31 0.000 Intergenic AluJb|SINE|Alu -10396 NM_015510 25979 Hs.386989 NM_015510 ENSG00000109016 DHRS7B CGI-93|SDR32C1 dehydrogenase/reductase 7B protein-coding chr12-4612 chr12 40195638 40195848 + 7.31 0.000 Intergenic Intergenic -29254 NM_198578 120892 Hs.187636 NM_198578 ENSG00000188906 LRRK2 AURA17|DARDARIN|PARK8|RIPK7|ROCO2 leucine rich repeat kinase 2 protein-coding chr3-7809 chr3 97815470 97815680 + 7.31 0.000 Intergenic Intergenic -6436 NM_153605 131544 Hs.733378 NM_153605 ENSG00000080200 CRYBG3 DKFZp667G2110|vlAKAP crystallin beta-gamma domain containing 3 protein-coding chr5-7657 chr5 52965244 52965454 + 7.31 0.000 Intergenic AluSz|SINE|Alu -24003 NR_073105 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr13-2237 chr13 25082289 25082499 + 7.31 0.000 Intergenic LTR33|LTR|ERVL -13744 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr1-14106 chr1 30982441 30982651 + 7.31 0.000 intron (NM_001020658, intron 7 of 21) L4_B_Mam|LINE|RTE-X -14309 NR_003066 692200 NR_003066 SNORD103C HBII-251|SNORD85 small nucleolar RNA, C/D box 103C snoRNA chr1-9284 chr1 25676754 25676964 + 7.31 0.000 intron (NM_020379, intron 1 of 11) intron (NM_020379, intron 1 of 11) 59391 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr4-5159 chr4 155163058 155163268 + 7.31 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -45473 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chrX-3835 chrX 151863611 151863821 + 7.31 0.000 Intergenic Intergenic 47367 NR_136578 105373368 Hs.256904 NR_136578 MAGEA4-AS1 - MAGEA4 antisense RNA 1 ncRNA chr7-8416 chr7 45973184 45973394 + 7.31 0.000 Intergenic Intergenic -52017 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr4-7952 chr4 110287170 110287380 + 7.31 0.000 Intergenic L2a|LINE|L2 -88660 NM_001130721 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr5-7781 chr5 63248405 63248615 + 7.31 0.000 Intergenic Intergenic 669691 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr10-1585 chr10 22229204 22229414 + 7.31 0.000 Intergenic CpG -19326 NM_001199938 340900 Hs.450519 NM_001199938 ENSG00000223601 EBLN1 EBLN-1 endogenous Bornavirus like nucleoprotein 1 protein-coding chr20-2658 chr20 44526235 44526445 + 7.31 0.000 Intergenic MER51B|LTR|ERV1 -4224 NM_198941 10955 Hs.272168 NM_006811 ENSG00000132824 SERINC3 AIGP1|DIFF33|SBBI99|TDE|TDE1|TMS-1 serine incorporator 3 protein-coding chr8-2961 chr8 58850356 58850566 + 7.31 0.000 intron (NM_014729, intron 4 of 8) MER74B|LTR|ERVL -190608 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr11-8227 chr11 65932245 65932455 + 7.31 0.000 Intergenic LTR78|LTR|ERV1 12924 NM_006442 10589 Hs.356742 NM_006442 ENSG00000175550 DRAP1 NC2-alpha DR1 associated protein 1 protein-coding chr6-3626 chr6 114556098 114556308 + 7.31 0.000 Intergenic L1PA7|LINE|L1 -493326 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr6-4806 chr6 79601117 79601327 + 7.31 0.000 Intergenic AluJb|SINE|Alu -30107 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chr19-6361 chr19 11626822 11627032 + 7.31 0.000 Intergenic LTR3A|LTR|ERVK 29444 NM_001290085 199692 Hs.526665 NM_145295 ENSG00000198551 ZNF627 - zinc finger protein 627 protein-coding chr9-3842 chr9 130480720 130480930 + 7.31 0.000 intron (NM_054012, intron 11 of 14) intron (NM_054012, intron 11 of 14) 35864 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr7-8929 chr7 95770243 95770453 + 7.31 0.000 Intergenic MER66B|LTR|ERV1 -2158 NM_001278422 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr1-12286 chr1 232172603 232172813 + 7.31 0.000 Intergenic Intergenic 246874 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr12-3574 chr12 29581907 29582117 + 7.31 0.000 intron (NM_001367875, intron 10 of 19) intron (NM_001367875, intron 10 of 19) -82319 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding chr17-7682 chr17 31012796 31013006 + 7.31 0.000 intron (NM_001350579, intron 1 of 3) intron (NM_001350579, intron 1 of 3) 4617 NM_001350579 107984974 Hs.558901 NM_001350575 LOC107984974 - uncharacterized LOC107984974 protein-coding chr11-9857 chr11 72871379 72871589 + 7.31 0.000 intron (NM_014824, intron 12 of 19) intron (NM_014824, intron 12 of 19) 57073 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chrX-961 chrX 103057193 103057403 + 7.31 0.000 Intergenic Intergenic 6873 NM_018476 55859 Hs.334370 NM_018476 ENSG00000133169 BEX1 BEX2|HBEX2|HGR74-h brain expressed X-linked 1 protein-coding chr3-3499 chr3 12888257 12888467 + 7.31 0.000 Intergenic AluJo|SINE|Alu -3151 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr20-4077 chr20 39102110 39102320 + 7.31 0.000 Intergenic L2b|LINE|L2 122533 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr6-6230 chr6 21528969 21529179 + 7.31 0.000 Intergenic Intergenic -17182 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr5-3562 chr5 60844163 60844373 + 7.31 0.000 promoter-TSS (NM_001297618) promoter-TSS (NM_001297618) 1 NM_024930 79993 Hs.274256 NM_024930 ENSG00000164181 ELOVL7 - ELOVL fatty acid elongase 7 protein-coding chr17-5532 chr17 43627613 43627823 + 7.31 0.000 Intergenic Intergenic 33845 NM_013999 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr17-7395 chr17 8341538 8341748 + 7.31 0.000 intron (NM_153007, intron 1 of 2) AluJb|SINE|Alu 1803 NM_153007 146852 Hs.186045 NM_153007 ENSG00000184650 ODF4 CT134|CT136|OPPO1 outer dense fiber of sperm tails 4 protein-coding chr6-4503 chr6 37394439 37394649 + 7.31 0.000 non-coding (NR_046399, exon 8 of 8) non-coding (NR_046399, exon 8 of 8) -38677 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr9-4852 chr9 910479 910689 + 7.31 0.000 intron (NM_001363767, intron 3 of 4) intron (NM_001363767, intron 3 of 4) -66071 NM_021240 58524 Hs.189174 NM_021240 ENSG00000064218 DMRT3 DMRTA3 doublesex and mab-3 related transcription factor 3 protein-coding chr16-4259 chr16 23255843 23256053 + 7.31 0.000 Intergenic AluSx|SINE|Alu -46354 NM_000336 6338 Hs.414614 NM_000336 ENSG00000168447 SCNN1B BESC1|ENaCb|ENaCbeta|LIDLS1|SCNEB sodium channel epithelial 1 beta subunit protein-coding chr9-7299 chr9 9718879 9719089 + 7.31 0.000 intron (NM_002839, intron 7 of 45) LTR2752|LTR|ERV1 -80408 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr21-1773 chr21 37032863 37033073 + 7.31 0.000 Intergenic Intergenic 26266 NM_018962 53820 Hs.254560 NM_018962 ENSG00000183145 RIPPLY3 DSCR6 ripply transcriptional repressor 3 protein-coding chr1-12597 chr1 34909094 34909304 + 7.31 0.000 intron (NM_001080418, intron 1 of 11) intron (NM_001080418, intron 1 of 11) 20451 NM_001080418 58512 Hs.436393 NM_001080418 ENSG00000116544 DLGAP3 DAP3|SAPAP3 DLG associated protein 3 protein-coding chr2-9843 chr2 165676268 165676478 + 7.31 0.000 exon (NM_001172173, exon 6 of 7) exon (NM_001172173, exon 6 of 7) 104037 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr14-4238 chr14 100592684 100592894 + 7.31 0.000 Intergenic Intergenic -22997 NM_020836 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr7-4806 chr7 93757117 93757327 + 7.31 0.000 Intergenic ERVL-E-int|LTR|ERVL 40294 NR_039796 100616206 NR_039796 ENSG00000265423 MIR4652 - microRNA 4652 ncRNA chr2-6156 chr2 237628030 237628240 + 7.31 0.000 intron (NM_001137550, intron 1 of 23) CpG 548 NM_001137550 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr6-6527 chr6 129854387 129854597 + 7.31 0.000 intron (NM_001010876, intron 1 of 4) intron (NM_001010876, intron 1 of 4) 6823 NM_001010876 253582 NM_001010876 ENSG00000203756 TMEM244 C6orf191|bA174C7.4 transmembrane protein 244 protein-coding chr14-3393 chr14 95299000 95299210 + 7.31 0.000 intron (NM_024734, intron 1 of 12) L2a|LINE|L2 20803 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr16-4636 chr16 73357800 73358010 + 7.31 0.000 Intergenic Intergenic -28900 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr4-7218 chr4 42493216 42493426 + 7.31 0.000 intron (NM_001105529, intron 23 of 35) intron (NM_001105529, intron 23 of 35) 95833 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr6-1981 chr6 159970068 159970278 + 7.31 0.000 intron (NM_000876, intron 1 of 47) intron (NM_000876, intron 1 of 47) 1074 NM_000876 3482 Hs.487062 NM_000876 ENSG00000197081 IGF2R CD222|CI-M6PR|CIMPR|M6P-R|M6P/IGF2R|MPR 300|MPR1|MPR300|MPRI insulin like growth factor 2 receptor protein-coding chr6-1972 chr6 152936878 152937088 + 7.31 0.000 Intergenic AluSx3|SINE|Alu 46058 NM_012177 26271 Hs.520506 NM_012177 ENSG00000112029 FBXO5 EMI1|FBX5|Fbxo31 F-box protein 5 protein-coding chr10-5446 chr10 78630285 78630495 + 7.31 0.000 Intergenic Intergenic 363048 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr19-6273 chr19 7810323 7810533 + 7.31 0.000 Intergenic LOR1a|LTR|ERV1 -19790 NM_001159944 115704 Hs.26870 NM_145245 ENSG00000142459 EVI5L - ecotropic viral integration site 5 like protein-coding chr16-5695 chr16 75819848 75820058 + 7.31 0.000 Intergenic Intergenic -93463 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr6-5379 chr6 151478654 151478864 + 7.31 0.000 Intergenic Intergenic -15258 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chr11-1901 chr11 47931628 47931838 + 7.31 0.000 Intergenic AluSq|SINE|Alu -48826 NM_002843 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr19-7071 chr19 55322617 55322827 + 7.31 0.000 non-coding (NR_104066, exon 2 of 7) non-coding (NR_104066, exon 2 of 7) 2619 NM_001282011 284417 Hs.382625 NM_001085488 ENSG00000180061 TMEM150B DRAM3|TMEM224|TTN2 transmembrane protein 150B protein-coding chr17-2257 chr17 16938599 16938809 + 7.31 0.000 TTS (NM_012452) TTS (NM_012452) -5528 NR_147084 96597 NR_147084 TBC1D27P TBC1D27 TBC1 domain family member 27, pseudogene pseudo chr3-10926 chr3 173306242 173306452 + 7.31 0.000 Intergenic Intergenic -89605 NM_001365929 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr9-4855 chr9 2028932 2029142 + 7.31 0.000 exon (NM_001289396, exon 2 of 34) exon (NM_001289396, exon 2 of 34) 7092 NM_001289396 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr11-9392 chr11 57088292 57088502 + 7.31 0.000 Intergenic Intergenic 50863 NR_036445 219525 Hs.554519 NR_036445 ENSG00000283307 OR5AK4P PJCG3 olfactory receptor family 5 subfamily AK member 4 pseudogene pseudo chr11-5558 chr11 100613031 100613241 + 7.31 0.000 Intergenic L1MEf|LINE|L1 -74152 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr10-2318 chr10 49272743 49272953 + 7.31 0.000 Intergenic Intergenic 26045 NR_108038 100506769 Hs.562293 NR_108038 C10orf71-AS1 - C10orf71 antisense RNA 1 ncRNA chr7-9262 chr7 123915158 123915368 + 7.31 0.000 Intergenic Intergenic -9978 NM_003117 6677 Hs.121494 NM_003117 ENSG00000106304 SPAM1 HEL-S-96n|HYA1|HYAL1|HYAL3|HYAL5|PH-20|PH20|SPAG15 sperm adhesion molecule 1 protein-coding chr6-8394 chr6 150407584 150407794 + 7.31 0.000 Intergenic Intergenic 38677 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr18-3495 chr18 73312396 73312606 + 7.31 0.000 Intergenic L1MEc|LINE|L1 -12440 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr1-15422 chr1 152517094 152517304 + 7.31 0.000 Intergenic Intergenic 2717 NM_019060 54544 Hs.110196 NM_019060 ENSG00000169509 CRCT1 C1orf42|NICE-1|NICE1 cysteine rich C-terminal 1 protein-coding chr5-9133 chr5 175621877 175622087 + 7.31 0.000 Intergenic MER21C|LTR|ERVL -36089 NR_160284 3274 Hs.247885 NM_022304 ENSG00000113749 HRH2 H2R|HH2R histamine receptor H2 protein-coding chr21-908 chr21 27225584 27225794 + 7.31 0.000 Intergenic Intergenic -258601 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr10-7095 chr10 94390091 94390301 + 7.31 0.000 Intergenic Harlequin-int|LTR|ERV1 -12345 NM_015188 23232 Hs.500598 NM_015188 ENSG00000108239 TBC1D12 - TBC1 domain family member 12 protein-coding chr3-8810 chr3 6976038 6976248 + 7.31 0.000 intron (NM_000844, intron 1 of 9) MER102a|DNA|hAT-Charlie -82126 NR_131906 105376946 Hs.616038 NR_131906 ENSG00000237665 GRM7-AS2 - GRM7 antisense RNA 2 ncRNA chr12-8314 chr12 129326973 129327183 + 7.31 0.000 intron (NM_133448, intron 4 of 8) intron (NM_133448, intron 4 of 8) 118477 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chr2-8447 chr2 121170822 121171032 + 7.31 0.000 Intergenic L1ME1|LINE|L1 114275 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chrX-3478 chrX 35667639 35667849 + 7.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR -130598 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr9-6311 chr9 137294852 137295062 + 7.31 0.000 Intergenic CpG 7314 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr11-5772 chr11 4206332 4206542 + 7.31 0.000 Intergenic Intergenic 19285 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LINC02749 - long intergenic non-protein coding RNA 2749 ncRNA chr15-4376 chr15 42091322 42091532 + 7.31 0.000 intron (NM_178034, intron 1 of 19) LTR13|LTR|ERVK 3135 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr17-7481 chr17 15785684 15785894 + 7.31 0.000 Intergenic AluY|SINE|Alu -1061 NR_002211 4213 Hs.356135 NR_002211 MEIS3P1 MEIS3|MEIS4|MRG2 Meis homeobox 3 pseudogene 1 pseudo chr4-4022 chr4 2056450 2056660 + 7.31 0.000 Intergenic ERV24_Prim-int|LTR|ERV1 -2772 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr2-11132 chr2 137436074 137436284 + 7.31 0.000 intron (NM_001316349, intron 14 of 27) intron (NM_001316349, intron 14 of 27) 491753 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr8-3641 chr8 4080192 4080402 + 7.31 0.000 intron (NM_033225, intron 3 of 69) intron (NM_033225, intron 3 of 69) 914617 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr12-8319 chr12 129583401 129583611 + 7.31 0.000 intron (NM_133448, intron 2 of 8) L1ME1|LINE|L1 320519 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr16-2563 chr16 71545596 71545806 + 7.31 0.000 Intergenic AluSx1|SINE|Alu 19275 NM_001166395 10164 Hs.251383 NM_005769 ENSG00000140835 CHST4 GST3|GlcNAc6ST2|HECGLCNAC6ST|LSST carbohydrate sulfotransferase 4 protein-coding chr2-7000 chr2 141143778 141143988 + 7.31 0.000 intron (NM_018557, intron 7 of 90) MIRc|SINE|MIR -557198 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr5-5462 chr5 138793489 138793699 + 7.31 0.000 intron (NM_001323985, intron 3 of 17) intron (NM_001323985, intron 3 of 17) -39670 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr8-3331 chr8 36287071 36287281 + 7.31 0.000 Intergenic MSTD|LTR|ERVL-MaLR -497198 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr5-7216 chr5 8475891 8476101 + 7.31 0.000 Intergenic Intergenic 15071 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr17-7412 chr17 9472556 9472766 + 7.31 0.000 intron (NM_004853, intron 6 of 7) intron (NM_004853, intron 6 of 7) 103159 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr6-8196 chr6 134133990 134134200 + 7.31 0.000 Intergenic Tigger8|DNA|TcMar-Tigger -16415 NR_037938 387065 Hs.571061 NR_037938 HMGA1P7 HMGA1L7 high mobility group AT-hook 1 pseudogene 7 pseudo chr17-2336 chr17 58330626 58330836 + 7.31 0.000 TTS (NR_029683) TTS (NR_029683) 587 NR_029683 406934 NR_029683 ENSG00000284353 MIR142 MIRN142|mir-142 microRNA 142 ncRNA chr1-14585 chr1 53583788 53583998 + 7.31 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 124494 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr1-6926 chr1 153261703 153261913 + 7.31 0.000 exon (NM_000427, exon 2 of 2) exon (NM_000427, exon 2 of 2) 2121 NM_000427 4014 Hs.251680 NM_000427 ENSG00000203782 LOR - loricrin protein-coding chr5-4642 chr5 35054692 35054902 + 7.31 0.000 TTS (NM_000949) TTS (NM_000949) -6848 NM_031900 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr15-4753 chr15 69384854 69385064 + 7.31 0.000 intron (NM_001104554, intron 5 of 8) intron (NM_001104554, intron 5 of 8) -29390 NM_138555 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr12-7521 chr12 69167969 69168179 + 7.31 0.000 Intergenic LTR49|LTR|ERV1 -71495 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr14-5119 chr14 89430311 89430521 + 7.31 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 13062 NR_036500 400236 Hs.585207 NR_036500 ENSG00000258920 FOXN3-AS1 - FOXN3 antisense RNA 1 ncRNA GL383533.1-2 GL383533.1 81897 82107 + 7.31 0.000 NA NA NA NA chr22-4285 chr22 49671158 49671368 + 7.31 0.000 Intergenic CpG -13744 NM_001289922 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr2-14129 chr2 202429220 202429430 + 7.31 0.000 intron (NM_001204, intron 1 of 12) L2c|LINE|L2 52998 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr2-11614 chr2 3326108 3326318 + 7.31 0.000 intron (NM_001330530, intron 3 of 9) intron (NM_001330530, intron 3 of 9) 51605 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr14-1844 chr14 64936345 64936555 + 7.31 0.000 intron (NM_001202559, intron 3 of 13) AluJo|SINE|Alu 6295 NR_046321 2877 Hs.2704 NM_002083 ENSG00000176153 GPX2 GI-GPx|GPRP|GPRP-2|GPx-2|GPx-GI|GSHPX-GI|GSHPx-2 glutathione peroxidase 2 protein-coding chr8-5890 chr8 16086857 16087067 + 7.31 0.000 Intergenic BLACKJACK|DNA|hAT-Blackjack 99310 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr16-3084 chr16 66227686 66227896 + 7.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR -138900 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr3-6247 chr3 68311716 68311926 + 7.31 0.000 intron (NM_001252216, intron 2 of 4) THE1B-int|LTR|ERVL-MaLR -188816 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr3-4236 chr3 140244317 140244527 + 7.31 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 264367 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr11-5787 chr11 5445804 5446014 + 7.31 0.000 intron (NM_001005567, intron 1 of 4) L1ME2z|LINE|L1 -4356 NM_001005288 390063 Hs.553732 NM_001005288 ENSG00000167359 OR51I1 - olfactory receptor family 51 subfamily I member 1 protein-coding chr2-8983 chr2 191038596 191038806 + 7.31 0.000 intron (NM_003151, intron 16 of 23) intron (NM_003151, intron 16 of 23) 17175 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr5-1340 chr5 158582821 158583031 + 7.31 0.000 Intergenic SVA_D|Retroposon|SVA -173153 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr10-4151 chr10 84671375 84671585 + 7.31 0.000 Intergenic MLT2B1|LTR|ERVL 246311 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr12-4176 chr12 90869018 90869228 + 7.31 0.000 Intergenic Intergenic -48900 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr16-4320 chr16 29904815 29905025 + 7.31 0.000 exon (NM_181718, exon 2 of 3) exon (NM_181718, exon 2 of 3) 4432 NM_181718 253982 Hs.655761 NM_181718 ENSG00000174939 ASPHD1 - aspartate beta-hydroxylase domain containing 1 protein-coding chr2-11449 chr2 226903180 226903390 + 7.31 0.000 intron (NM_001349069, intron 5 of 8) Tigger7|DNA|TcMar-Tigger 67231 NM_032276 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding chr1-8412 chr1 86339880 86340090 + 7.31 0.000 Intergenic HERVH48-int|LTR|ERV1 17702 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr9-7547 chr9 34955566 34955776 + 7.31 0.000 Intergenic AluSx|SINE|Alu -1816 NM_001304333 23349 Hs.7989 NM_015297 ENSG00000122733 PHF24 - PHD finger protein 24 protein-coding chr17-5475 chr17 40606564 40606774 + 7.31 0.000 Intergenic MER41C|LTR|ERV1 41149 NM_003079 6605 Hs.743978 NM_003079 ENSG00000073584 SMARCE1 BAF57|CSS5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding chr10-7292 chr10 131277698 131277908 + 7.31 0.000 intron (NM_174937, intron 3 of 11) intron (NM_174937, intron 3 of 11) 33918 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr2-13715 chr2 166959489 166959699 + 7.31 0.000 intron (NM_152381, intron 2 of 10) intron (NM_152381, intron 2 of 10) 71107 NM_001199143 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr8-2823 chr8 127541377 127541587 + 7.31 0.000 Intergenic L1PA4|LINE|L1 -59343 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr9-5652 chr9 122172729 122172939 + 7.31 0.000 intron (NM_198469, intron 3 of 4) intron (NM_198469, intron 3 of 4) 12926 NM_001286828 254956 Hs.71428 NM_198469 ENSG00000185681 MORN5 C9orf113|C9orf18 MORN repeat containing 5 protein-coding chr11-9172 chr11 35236209 35236419 + 7.31 0.000 Intergenic L2c|LINE|L2 73364 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr3-4257 chr3 145612925 145613135 + 7.31 0.000 Intergenic MLT2A2|LTR|ERVL 456155 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr5-4729 chr5 43799562 43799772 + 7.31 0.000 Intergenic Intergenic -196437 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr2-7289 chr2 236335900 236336110 + 7.31 0.000 intron (NR_073043, intron 18 of 19) MLT1J2|LTR|ERVL-MaLR -71660 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr20-2330 chr20 10260355 10260565 + 7.31 0.000 intron (NM_001322909, intron 2 of 8) intron (NM_001322909, intron 2 of 8) -40954 NR_040710 100131208 Hs.658178 NR_040710 ENSG00000227906 SNAP25-AS1 - SNAP25 antisense RNA 1 ncRNA chr3-8478 chr3 126110579 126110789 + 7.31 0.000 intron (NR_072979, intron 17 of 20) intron (NR_072979, intron 17 of 20) 7044 NR_046602 100874204 Hs.742339 NR_046602 ENSG00000250218 ALDH1L1-AS1 - ALDH1L1 antisense RNA 1 ncRNA chr13-2592 chr13 73362670 73362880 + 7.31 0.000 Intergenic L2a|LINE|L2 -201469 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr9-8242 chr9 110700978 110701188 + 7.31 0.000 intron (NM_001166281, intron 5 of 11) L2|LINE|L2 -27179 NM_001369398 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr5-2529 chr5 168317519 168317729 + 7.31 0.000 intron (NM_001161661, intron 1 of 22) intron (NM_001161661, intron 1 of 22) 25979 NM_001161661 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr11-5695 chr11 461118 461328 + 7.31 0.000 intron (NM_001329545, intron 2 of 10) intron (NM_001329545, intron 2 of 10) 10944 NM_001329544 81490 Hs.12851 NM_030783 ENSG00000174915 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding chr9-8836 chr9 135457114 135457324 + 7.31 0.000 Intergenic Intergenic 15030 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr22-3029 chr22 28792354 28792564 + 7.31 0.000 Intergenic Intergenic 8113 NM_001079539 7494 Hs.437638 NM_005080 ENSG00000100219 XBP1 TREB-5|TREB5|XBP-1|XBP2 X-box binding protein 1 protein-coding chr20-1988 chr20 46518039 46518249 + 7.31 0.000 Intergenic Intergenic -4572 NM_001353818 55713 Hs.147041 NM_018102 ENSG00000198185 ZNF334 - zinc finger protein 334 protein-coding chr15-4216 chr15 26654446 26654656 + 7.31 0.000 intron (NM_001278631, intron 3 of 9) AluJr|SINE|Alu -25461 NM_001191321 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr4-7231 chr4 43710231 43710441 + 7.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -217793 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr11-7899 chr11 127737839 127738049 + 7.31 0.000 Intergenic Intergenic 466874 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr7-7657 chr7 148619119 148619329 + 7.31 0.000 Intergenic Intergenic 28458 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr3-6473 chr3 108978165 108978375 + 7.31 0.000 intron (NM_014429, intron 24 of 27) intron (NM_014429, intron 24 of 27) -24391 NM_005459 9626 Hs.233363 NM_005459 ENSG00000138472 GUCA1C GCAP3 guanylate cyclase activator 1C protein-coding chrX-4811 chrX 101206567 101206777 + 7.31 0.000 Intergenic Intergenic -13272 NM_001939 1821 Hs.159291 NM_001939 ENSG00000102385 DRP2 DRP-2 dystrophin related protein 2 protein-coding chr8-2898 chr8 142821110 142821320 + 7.31 0.000 Intergenic Intergenic -13586 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr19-5198 chr19 17690561 17690771 + 7.31 0.000 Intergenic AluY|SINE|Alu -2467 NM_001080421 23025 Hs.164502 NM_001080421 ENSG00000130477 UNC13A Munc13-1 unc-13 homolog A protein-coding chr5-2940 chr5 142701858 142702068 + 7.31 0.000 Intergenic Intergenic -3893 NM_001257205 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr16-2153 chr16 53195718 53195928 + 7.31 0.000 intron (NM_001352127, intron 2 of 38) AluSz6|SINE|Alu -12142 NM_001352157 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr11-7265 chr11 19288460 19288670 + 7.31 0.000 Intergenic L1PA11|LINE|L1 -46910 NM_001256372 79733 Hs.523526 NM_024680 ENSG00000129173 E2F8 E2F-8 E2F transcription factor 8 protein-coding chr2-14627 chr2 234686439 234686649 + 7.31 0.000 intron (NR_132376, intron 1 of 2) MLT1D|LTR|ERVL-MaLR 3876 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr2-10241 chr2 112873967 112874177 + 7.31 0.000 Intergenic Intergenic -37293 NM_000576 3553 Hs.126256 NM_000576 ENSG00000125538 IL1B IL-1|IL1-BETA|IL1F2 interleukin 1 beta protein-coding chr16-2214 chr16 86168510 86168720 + 7.31 0.000 Intergenic LTR88b|LTR|Gypsy? -27566 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr10-5503 chr10 82223189 82223399 + 7.31 0.000 intron (NM_001165973, intron 2 of 10) intron (NM_001165973, intron 2 of 10) 9626 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr16-2970 chr16 11683788 11683998 + 7.31 0.000 intron (NR_136673, intron 9 of 9) AluSz|SINE|Alu 15438 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr4-7988 chr4 114534708 114534918 + 7.31 0.000 Intergenic Intergenic -63589 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr3-4749 chr3 94004377 94004587 + 7.31 0.000 intron (NM_001174151, intron 2 of 8) intron (NM_001174151, intron 2 of 8) 24115 NM_001001850 415117 Hs.679768 NM_001001850 ENSG00000178750 STX19 - syntaxin 19 protein-coding chr3-4974 chr3 14617077 14617287 + 7.31 0.000 Intergenic MER72|LTR|ERV1 -34564 NR_135523 51244 Hs.517820 NM_016474 ENSG00000154781 CCDC174 C3orf19|HSPC212|IHPM|IHPMR coiled-coil domain containing 174 protein-coding chr17-7008 chr17 52196088 52196298 + 7.31 0.000 Intergenic THE1D|LTR|ERVL-MaLR -36176 NM_001082534 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr5-8257 chr5 111657062 111657272 + 7.31 0.000 intron (NR_040093, intron 1 of 6) intron (NR_040093, intron 1 of 6) 99084 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr18-1252 chr18 55234749 55234959 + 7.31 0.000 intron (NM_001348216, intron 8 of 12) intron (NM_001348216, intron 8 of 12) 67806 NM_001243236 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr2-11962 chr2 26774248 26774458 + 7.31 0.000 intron (NM_017877, intron 2 of 5) intron (NM_017877, intron 2 of 5) 10069 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr3-9825 chr3 75303248 75303458 + 7.31 0.000 Intergenic Intergenic 88877 NR_039646 100616394 NR_039646 ENSG00000284252 MIR4444-1 MIR4444|hsa-mir-4444-1|miR-4444-1 microRNA 4444-1 ncRNA chr11-9306 chr11 45618055 45618265 + 7.31 0.000 Intergenic Intergenic 47462 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr5-4458 chr5 6080561 6080771 + 7.31 0.000 Intergenic Intergenic 256626 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr3-8033 chr3 194802979 194803189 + 7.31 0.000 Intergenic Intergenic -34375 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr5-6598 chr5 32531572 32531782 + 7.31 0.000 Intergenic Intergenic -53880 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr2-8473 chr2 124970068 124970278 + 7.31 0.000 Intergenic Intergenic 944886 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr5-3538 chr5 24892398 24892608 + 7.31 0.000 Intergenic AluSx1|SINE|Alu -51920 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA chr15-5205 chr15 95204145 95204355 + 7.31 0.000 Intergenic HERVL-int|LTR|ERVL 122850 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr11-9202 chr11 37420072 37420282 + 7.31 0.000 Intergenic Intergenic -518424 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr11-6245 chr11 49870439 49870649 + 7.31 0.000 Intergenic L1PA4|LINE|L1 -81847 NM_001001955 283092 Hs.553668 NM_001001955 ENSG00000258817 OR4C13 - olfactory receptor family 4 subfamily C member 13 protein-coding chr10-8178 chr10 71401264 71401474 + 7.31 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 4435 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr5-2218 chr5 177373173 177373383 + 7.31 0.000 TTS (NM_001366617) TTS (NM_001366617) -11156 NM_003052 6569 Hs.936 NM_003052 ENSG00000131183 SLC34A1 FRTS2|HCINF2|NAPI-3|NPHLOP1|NPT2|NPTIIa|SLC11|SLC17A2 solute carrier family 34 member 1 protein-coding chr17-4373 chr17 18155491 18155701 + 7.31 0.000 intron (NM_016239, intron 46 of 64) MIRc|SINE|MIR -28232 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr9-4162 chr9 8724569 8724779 + 7.31 0.000 intron (NM_130392, intron 1 of 30) AluJb|SINE|Alu 9272 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr1-15672 chr1 166305738 166305948 + 7.31 0.000 Intergenic L2a|LINE|L2 -139088 NR_135199 149297 Hs.22930 NM_001017961 ENSG00000188859 FAM78B - family with sequence similarity 78 member B protein-coding chr1-14588 chr1 53653767 53653977 + 7.31 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 80332 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr20-4204 chr20 46538301 46538511 + 7.31 0.000 Intergenic MER21C|LTR|ERVL 12248 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr3-7331 chr3 43629441 43629651 + 7.31 0.000 intron (NM_001346469, intron 1 of 11) L2|LINE|L2 -7469 NM_001204831 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr22-1470 chr22 50545448 50545658 + 7.31 0.000 promoter-TSS (NM_138433) promoter-TSS (NM_138433) -346 NM_138433 113730 Hs.137007 NM_138433 ENSG00000130487 KLHDC7B - kelch domain containing 7B protein-coding chr20-4438 chr20 61603020 61603230 + 7.31 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 3364 NM_001252339 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr22-2366 chr22 44822170 44822380 + 7.31 0.000 intron (NM_181335, intron 5 of 11) intron (NM_181335, intron 5 of 11) 69717 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr20-2066 chr20 11970083 11970293 + 7.31 0.000 Intergenic Intergenic 52295 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr10-7532 chr10 14530521 14530731 + 7.31 0.000 intron (NM_031453, intron 2 of 4) intron (NM_031453, intron 2 of 4) 2088 NM_001320741 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr4-7943 chr4 109394196 109394406 + 7.31 0.000 Intergenic LTR16C|LTR|ERVL -39414 NM_001318085 10427 Hs.292472 NM_006323 ENSG00000138802 SEC24B SEC24 SEC24 homolog B, COPII coat complex component protein-coding chr2-13359 chr2 136141615 136141825 + 7.31 0.000 Intergenic Intergenic -23565 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr2-14101 chr2 200587372 200587582 + 7.31 0.000 intron (NM_001159, intron 1 of 34) Arthur1A|DNA|hAT-Tip100 1463 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr2-6764 chr2 43834195 43834405 + 7.31 0.000 intron (NM_022436, intron 2 of 12) L2|LINE|L2 4539 NM_022436 64240 Hs.132992 NM_022436 ENSG00000138075 ABCG5 STSL ATP binding cassette subfamily G member 5 protein-coding chr15-3807 chr15 72978825 72979035 + 7.31 0.000 Intergenic AluJb|SINE|Alu -73533 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr15-3413 chr15 89749573 89749783 + 7.31 0.000 TTS (NM_018670) TTS (NM_018670) 1631 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr1-8623 chr1 200936728 200936938 + 7.31 0.000 intron (NR_147176, intron 3 of 15) AluSz6|SINE|Alu 7889 NR_147176 647215 Hs.576504 NR_147176 ENSG00000233217 MROH3P C1orf81 maestro heat like repeat family member 3, pseudogene pseudo chr7-9427 chr7 133434388 133434598 + 7.31 0.000 intron (NM_021807, intron 7 of 17) intron (NM_021807, intron 7 of 17) 143612 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chr3-7506 chr3 166005165 166005375 + 7.31 0.000 Intergenic Intergenic -167847 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr5-6926 chr5 137566781 137566991 + 7.31 0.000 Intergenic Intergenic -67560 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chrX-3658 chrX 101215582 101215792 + 7.31 0.000 Intergenic Intergenic -4257 NM_001939 1821 Hs.159291 NM_001939 ENSG00000102385 DRP2 DRP-2 dystrophin related protein 2 protein-coding chr2-13835 chr2 176474467 176474677 + 7.31 0.000 Intergenic L2a|LINE|L2 126480 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr9-8390 chr9 118811155 118811365 + 7.31 0.000 Intergenic MER21A|LTR|ERVL 131589 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr9-7252 chr9 4397824 4398034 + 7.31 0.000 Intergenic Intergenic -92539 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr2-4692 chr2 219469321 219469531 + 7.31 0.000 intron (NM_005876, intron 13 of 40) intron (NM_005876, intron 13 of 40) 8614 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr7-5677 chr7 66086230 66086440 + 7.31 0.000 intron (NM_000048, intron 6 of 16) intron (NM_000048, intron 6 of 16) 10516 NM_001024943 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr1-15677 chr1 166936569 166936779 + 7.31 0.000 exon (NM_199351, exon 5 of 10) exon (NM_199351, exon 5 of 10) 38866 NM_199351 387597 Hs.444835 NM_199351 ENSG00000143195 ILDR2 C1orf32|dJ782G3.1 immunoglobulin like domain containing receptor 2 protein-coding chr11-5518 chr11 86293105 86293315 + 7.31 0.000 Intergenic AluJr4|SINE|Alu -9030 NM_001322407 51501 Hs.283322 NM_016401 ENSG00000149196 HIKESHI C11orf73|HLD13|HSPC138|HSPC179|L7RN6|OPI10 heat shock protein nuclear import factor hikeshi protein-coding chr2-9679 chr2 35313839 35314049 + 7.31 0.000 Intergenic Intergenic -157461 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr9-4942 chr9 15075582 15075792 + 7.31 0.000 Intergenic L1MEf|LINE|L1 82360 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr2-5859 chr2 239131604 239131814 + 7.31 0.000 intron (NM_006037, intron 11 of 26) intron (NM_006037, intron 11 of 26) -45783 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr12-6434 chr12 86757932 86758142 + 7.31 0.000 intron (NM_001351286, intron 1 of 7) intron (NM_001351286, intron 1 of 7) -12888 NR_162123 113839519 NR_162123 MIR3059 - microRNA 3059 ncRNA chr11-8728 chr11 7428541 7428751 + 7.31 0.000 intron (NM_175733, intron 6 of 6) MER110A|LTR|ERV1 37189 NR_103855 100506258 Hs.661614 NR_103855 ENSG00000251364 LOC100506258 - uncharacterized LOC100506258 ncRNA chr16-6542 chr16 64095311 64095521 + 7.31 0.000 Intergenic Intergenic 1026647 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr6-8072 chr6 123202017 123202227 + 7.31 0.000 Intergenic LTR12C|LTR|ERV1 205887 NM_001010852 134829 Hs.486361 NM_001010852 ENSG00000146352 CLVS2 C6orf212|C6orf213|RLBP1L2|bA160A10.4 clavesin 2 protein-coding chr11-4885 chr11 45754421 45754631 + 7.31 0.000 Intergenic Intergenic -16906 NR_027134 374387 Hs.632142 NM_199137 ENSG00000205106 LINC02716 DKFZp779M0652 long intergenic non-protein coding RNA 2716 ncRNA chr4-5229 chr4 168711598 168711808 + 7.31 0.000 exon (NM_016081, exon 10 of 21) exon (NM_016081, exon 10 of 21) 80125 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr22-3320 chr22 20059043 20059253 + 7.31 0.000 intron (NM_001283215, intron 6 of 6) LTR51|LTR|ERV1 -21084 NM_001190326 54487 Hs.643452 NM_022720 ENSG00000128191 DGCR8 C22orf12|DGCRK6|Gy1|pasha DGCR8 microprocessor complex subunit protein-coding chr13-3775 chr13 44075621 44075831 + 7.31 0.000 Intergenic Intergenic -34823 NR_104065 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr6-7555 chr6 71249807 71250017 + 7.31 0.000 Intergenic Intergenic -38899 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr14-2188 chr14 100132493 100132703 + 7.31 0.000 intron (NM_001330221, intron 7 of 13) intron (NM_001330221, intron 7 of 13) 22943 NR_029888 442909 NR_029888 ENSG00000199082 MIR342 MIRN342|hsa-mir-342 microRNA 342 ncRNA chr2-11041 chr2 110931576 110931786 + 7.31 0.000 intron (NM_001371254, intron 11 of 18) MIRb|SINE|MIR 183907 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chrX-5135 chrX 130054786 130054996 + 7.31 0.000 intron (NM_021946, intron 11 of 11) AluSx1|SINE|Alu 49703 NM_021946 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr2-10528 chr2 232500063 232500273 + 7.31 0.000 Intergenic Intergenic -12334 NM_001290787 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr5-7855 chr5 72366375 72366585 + 7.31 0.000 3' UTR (NM_001284403, exon 7 of 7) 3' UTR (NM_001284403, exon 7 of 7) 46107 NM_001284403 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr18-1848 chr18 23540262 23540472 + 7.31 0.000 intron (NM_000271, intron 17 of 24) intron (NM_000271, intron 17 of 24) 36856 NM_013326 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr16-4893 chr16 88914737 88914947 + 7.31 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) -25195 NM_001290330 100129697 Hs.689377 NM_001290330 LOC100129697 - uncharacterized LOC100129697 protein-coding chr14-5274 chr14 100354862 100355072 + 7.31 0.000 intron (NM_213645, intron 3 of 9) intron (NM_213645, intron 3 of 9) 20380 NM_004184 7453 Hs.497599 NM_004184 ENSG00000140105 WARS GAMMA-2|HMN9|IFI53|IFP53 tryptophanyl-tRNA synthetase protein-coding chr6-4393 chr6 25482685 25482895 + 7.31 0.000 intron (NM_001173977, intron 12 of 36) intron (NM_001173977, intron 12 of 36) -169425 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr8-2937 chr8 24598422 24598632 + 7.31 0.000 Intergenic Intergenic -49909 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr5-3099 chr5 43306360 43306570 + 7.31 0.000 intron (NM_002130, intron 1 of 9) intron (NM_002130, intron 1 of 9) 6716 NM_001330663 3157 Hs.397729 NM_002130 ENSG00000112972 HMGCS1 HMGCS 3-hydroxy-3-methylglutaryl-CoA synthase 1 protein-coding chr2-10453 chr2 213272642 213272852 + 7.31 0.000 Intergenic AluSx3|SINE|Alu 11462 NR_144752 100130451 Hs.608433 NR_144752 SPAG16-DT - SPAG16 divergent transcript ncRNA chr20-3210 chr20 53056928 53057138 + 7.31 0.000 intron (NM_173485, intron 1 of 2) THE1B|LTR|ERVL-MaLR 84675 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr14-4970 chr14 75307712 75307922 + 7.31 0.000 Intergenic Intergenic 13413 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr11-7200 chr11 132429877 132430087 + 7.31 0.000 intron (NM_002545, intron 6 of 6) intron (NM_002545, intron 6 of 6) 145680 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr3-10218 chr3 121807180 121807390 + 7.31 0.000 intron (NM_001023570, intron 7 of 14) intron (NM_001023570, intron 7 of 14) 27775 NM_001023570 9657 Hs.604110 NM_001023570 ENSG00000173226 IQCB1 NPHP5|PIQ|SLSN5 IQ motif containing B1 protein-coding chr17-5306 chr17 27415452 27415662 + 7.31 0.000 Intergenic Intergenic -2448 NR_033892 440419 Hs.385755 NR_033892 ENSG00000266433 TBC1D3P5 - TBC1 domain family member 3 pseudogene 5 pseudo chr4-5511 chr4 88957844 88958054 + 7.31 0.000 intron (NM_014883, intron 4 of 23) MSTB-int|LTR|ERVL-MaLR 99236 NM_014883 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr1-12185 chr1 200028988 200029198 + 7.31 0.000 intron (NM_003822, intron 1 of 6) intron (NM_003822, intron 1 of 6) 1383 NM_003822 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr19-2770 chr19 42610172 42610382 + 7.31 0.000 intron (NR_073180, intron 2 of 2) SVA_D|Retroposon|SVA -15353 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr5-9034 chr5 168443657 168443867 + 7.31 0.000 intron (NM_001161661, intron 16 of 22) intron (NM_001161661, intron 16 of 22) -42709 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chr16-7120 chr16 89785571 89785781 + 7.31 0.000 intron (NM_000135, intron 14 of 42) intron (NM_000135, intron 14 of 42) 30971 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr20-991 chr20 56249545 56249755 + 7.31 0.000 exon (NM_019888, exon 1 of 1) exon (NM_019888, exon 1 of 1) 918 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr11-10131 chr11 88983367 88983577 + 7.31 0.000 intron (NM_001143831, intron 1 of 8) Tigger3b|DNA|TcMar-Tigger 64600 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr20-2010 chr20 56007497 56007707 + 7.31 0.000 Intergenic Intergenic -2083 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr1-7857 chr1 91684427 91684637 + 7.31 0.000 intron (NR_036634, intron 17 of 17) intron (NR_036634, intron 17 of 17) 183424 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr17-5207 chr17 15902834 15903044 + 7.31 0.000 Intergenic L1ME3B|LINE|L1 -41978 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr11-10630 chr11 125407827 125408037 + 7.31 0.000 intron (NM_022062, intron 7 of 12) intron (NM_022062, intron 7 of 12) -87282 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr8-5917 chr8 18045823 18046033 + 7.31 0.000 Intergenic Intergenic 37268 NM_001363743 427 Hs.527412 NM_004315 ENSG00000104763 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase 1 protein-coding chr19-3684 chr19 16550077 16550287 + 7.31 0.000 3' UTR (NM_024881, exon 6 of 6) 3' UTR (NM_024881, exon 6 of 6) -7745 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr22-2346 chr22 42548747 42548957 + 7.31 0.000 Intergenic AluSq2|SINE|Alu -5104 NM_001284334 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr4-4016 chr4 1834391 1834601 + 7.31 0.000 intron (NM_012318, intron 5 of 13) intron (NM_012318, intron 5 of 13) 21660 NM_012318 3954 Hs.120165 NM_012318 ENSG00000168924 LETM1 SLC55A1 leucine zipper and EF-hand containing transmembrane protein 1 protein-coding chr4-3382 chr4 24445910 24446120 + 7.31 0.000 intron (NM_001330752, intron 1 of 13) AluSz|SINE|Alu 26890 NR_148987 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr4-6159 chr4 36660701 36660911 + 7.31 0.000 Intergenic L1PA6|LINE|L1 -18906 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA chr2-14097 chr2 200211733 200211943 + 7.31 0.000 Intergenic Intergenic -94041 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr12-5958 chr12 83437501 83437711 + 7.31 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 750451 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr9-4248 chr9 91489917 91490127 + 7.31 0.000 Intergenic Intergenic -65396 NM_001290000 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr15-4569 chr15 58777249 58777459 + 7.31 0.000 intron (NM_001040450, intron 1 of 8) intron (NM_001040450, intron 1 of 8) 6052 NM_001040450 54629 Hs.591122 NM_019092 ENSG00000128923 MINDY2 FAM63B MINDY lysine 48 deubiquitinase 2 protein-coding chr7-5936 chr7 99848483 99848693 + 7.31 0.000 intron (NR_103869, intron 6 of 13) intron (NR_103869, intron 6 of 13) 20575 NM_022820 64816 Hs.306220 NM_022820 ENSG00000021461 CYP3A43 - cytochrome P450 family 3 subfamily A member 43 protein-coding chr20-4122 chr20 42160650 42160860 + 7.31 0.000 intron (NM_133170, intron 18 of 31) LTR85c|LTR|Gypsy? -524728 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr10-3934 chr10 92045767 92045977 + 7.31 0.000 TTS (NM_014912) TTS (NM_014912) 122102 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chr11-5682 chr11 132314984 132315194 + 7.31 0.000 TTS (NM_001144059) TTS (NM_001144059) 30787 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr11-9788 chr11 69836262 69836472 + 7.31 0.000 Intergenic Intergenic -16951 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr11-7636 chr11 60201101 60201311 + 7.31 0.000 TTS (NM_001351235) TTS (NM_001351235) 7950 NR_106758 102465250 NR_106758 ENSG00000275344 MIR6503 hsa-mir-6503 microRNA 6503 ncRNA chr15-3069 chr15 62277953 62278163 + 7.31 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger 26676 NR_107034 102465869 NR_107034 ENSG00000277919 MIR8067 hsa-mir-8067 microRNA 8067 ncRNA chr14-1517 chr14 53963788 53963998 + 7.31 0.000 Intergenic CpG -7002 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr2-8687 chr2 151115054 151115264 + 7.31 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 146704 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr13-2738 chr13 96639377 96639587 + 7.31 0.000 intron (NM_153456, intron 1 of 1) L1M4|LINE|L1 212253 NR_039723 100616137 NR_039723 ENSG00000283487 MIR4501 - microRNA 4501 ncRNA chr8-3365 chr8 48121258 48121468 + 7.31 0.000 Intergenic Intergenic 112932 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr1-8032 chr1 232428166 232428376 + 7.31 0.000 intron (NM_020808, intron 15 of 20) intron (NM_020808, intron 15 of 20) 87337 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr8-1737 chr8 17460549 17460759 + 7.31 0.000 Intergenic L1MD2|LINE|L1 -36434 NM_001370338 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr2-6351 chr2 95315949 95316159 + 7.31 0.000 intron (NM_013434, intron 2 of 8) ERVL-E-int|LTR|ERVL 18707 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr19-5564 chr19 913716 913926 + 7.31 0.000 promoter-TSS (NM_138774) promoter-TSS (NM_138774) -602 NM_138774 91300 Hs.557655 NM_138774 ENSG00000198858 R3HDM4 C19orf22 R3H domain containing 4 protein-coding chr6-6950 chr6 16674906 16675116 + 7.31 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 85173 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr9-5416 chr9 95595017 95595227 + 7.31 0.000 Intergenic LTR16C|LTR|ERVL -78065 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr9-7319 chr9 12159475 12159685 + 7.31 0.000 Intergenic Intergenic -533805 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr13-2287 chr13 29520783 29520993 + 7.31 0.000 intron (NM_003045, intron 8 of 12) intron (NM_003045, intron 8 of 12) -33138 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr8-3104 chr8 30674459 30674669 + 7.31 0.000 Intergenic AluSx1|SINE|Alu -16328 NM_002095 2961 Hs.77100 NM_002095 ENSG00000197265 GTF2E2 FE|TF2E2|TFIIE-B|TTD6 general transcription factor IIE subunit 2 protein-coding chr1-14099 chr1 30650640 30650850 + 7.31 0.000 Intergenic Intergenic -68027 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr1-13684 chr1 12467655 12467865 + 7.31 0.000 intron (NM_015378, intron 67 of 69) intron (NM_015378, intron 67 of 69) -39486 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr21-1403 chr21 45525791 45526001 + 7.31 0.000 exon (NM_001205207, exon 4 of 5) exon (NM_001205207, exon 4 of 5) 8860 NM_001205207 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr2-7138 chr2 192991697 192991907 + 7.31 0.000 Intergenic Intergenic 241957 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr12-4520 chr12 24360244 24360454 + 7.31 0.000 intron (NM_152989, intron 3 of 17) intron (NM_152989, intron 3 of 17) 137078 NR_120472 101928471 Hs.569156 NR_120472 ENSG00000256120 SOX5-AS1 - SOX5 antisense RNA 1 ncRNA chr2-5952 chr2 37871958 37872168 + 7.31 0.000 intron (NR_110012, intron 1 of 3) hAT-N1_Mam|DNA|hAT-Tip100? 3800 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr2-8450 chr2 121298543 121298753 + 7.31 0.000 Intergenic Kanga1d|DNA|TcMar-Tc2 -13446 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr12-3281 chr12 70246647 70246857 + 7.31 0.000 intron (NM_001199303, intron 1 of 15) intron (NM_001199303, intron 1 of 15) 3038 NM_001199303 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr10-6993 chr10 71272334 71272544 + 7.31 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -46814 NM_001363518 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr2-8803 chr2 168278407 168278617 + 7.31 0.000 Intergenic AluSz|SINE|Alu -30917 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr2-10229 chr2 110802519 110802729 + 7.31 0.000 intron (NM_001371254, intron 8 of 18) L1PA13|LINE|L1 70051 NM_001371254 chr15-3396 chr15 88792121 88792331 + 7.31 0.000 Intergenic L2a|LINE|L2 -11210 NM_001369268 176 Hs.2159 NM_001135 ENSG00000157766 ACAN AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD aggrecan protein-coding chrX-5037 chrX 121904416 121904626 + 7.31 0.000 Intergenic MER61-int|LTR|ERV1 533549 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr12-3879 chr12 116559780 116559990 + 7.31 0.000 intron (NM_001085481, intron 1 of 1) intron (NM_001085481, intron 1 of 1) 504 NM_001085481 643246 Hs.356061 NM_001085481 ENSG00000258102 MAP1LC3B2 ATG8G microtubule associated protein 1 light chain 3 beta 2 protein-coding chr3-10275 chr3 124535266 124535476 + 7.31 0.000 intron (NM_001024660, intron 33 of 59) intron (NM_001024660, intron 33 of 59) -49287 NM_001322995 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr1-12897 chr1 111990189 111990399 + 7.31 0.000 promoter-TSS (NR_145438) promoter-TSS (NR_145438) -242 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr1-15598 chr1 160739933 160740143 + 7.31 0.000 intron (NM_001282593, intron 1 of 3) intron (NM_001282593, intron 1 of 3) 791 NM_001282596 57823 Hs.517265 NM_021181 ENSG00000026751 SLAMF7 19A|CD319|CRACC|CS1 SLAM family member 7 protein-coding chr7-5324 chr7 26729373 26729583 + 7.31 0.000 intron (NM_003930, intron 6 of 12) L1M6|LINE|L1 91607 NR_161201 285941 Hs.413394 NR_161201 C7orf71 - chromosome 7 open reading frame 71 ncRNA chr3-8849 chr3 9374601 9374811 + 7.31 0.000 intron (NM_001114092, intron 5 of 9) intron (NM_001114092, intron 5 of 9) 11652 NM_015453 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding chr2-8601 chr2 140183137 140183347 + 7.31 0.000 Intergenic Intergenic 403443 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr17-3426 chr17 16672157 16672367 + 7.31 0.000 Intergenic Intergenic -17979 NM_014695 9720 Hs.745246 NM_014695 ENSG00000170160 CCDC144A - coiled-coil domain containing 144A protein-coding chr2-8462 chr2 122711259 122711469 + 7.31 0.000 Intergenic L1PA12|LINE|L1 362117 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr3-8522 chr3 138482392 138482602 + 7.31 0.000 TTS (NM_001322831) TTS (NM_001322831) 47881 NM_031913 83850 Hs.477711 NM_031913 ENSG00000158220 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin 3 protein-coding chr2-9265 chr2 220510742 220510952 + 7.31 0.000 Intergenic Intergenic -604282 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr1-14994 chr1 91008006 91008216 + 7.31 0.000 intron (NM_201269, intron 1 of 5) HAL1|LINE|L1 13397 NM_016620 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding chr5-6874 chr5 124051935 124052145 + 7.31 0.000 Intergenic Intergenic 386480 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr10-8752 chr10 103871156 103871366 + 7.31 0.000 Intergenic L2c|LINE|L2 -15855 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-7347 chr2 1017537 1017747 + 7.31 0.000 intron (NM_018968, intron 1 of 16) intron (NM_018968, intron 1 of 16) -66250 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr12-7896 chr12 107167388 107167598 + 7.31 0.000 Intergenic L2b|LINE|L2 -73944 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr3-6861 chr3 150975649 150975859 + 7.31 0.000 intron (NR_024066, intron 1 of 5) MER5B|DNA|hAT-Charlie -2755 NM_001195794 7401 Hs.745448 NM_052995 ENSG00000163646 CLRN1 RP61|USH3|USH3A clarin 1 protein-coding chr1-14953 chr1 87835084 87835294 + 7.31 0.000 Intergenic Intergenic -463534 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr1-13310 chr1 235949772 235949982 + 7.31 0.000 Intergenic AluJo|SINE|Alu -66164 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr16-3646 chr16 86271336 86271546 + 7.31 0.000 intron (NR_104139, intron 2 of 5) intron (NR_104139, intron 2 of 5) 14806 NR_104139 101154687 Hs.640512 NR_104139 LINC01081 TCONS00024764|TCONS_00024764 long intergenic non-protein coding RNA 1081 ncRNA chr5-4892 chr5 67262518 67262728 + 7.31 0.000 Intergenic Intergenic -65824 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr6-7270 chr6 43074602 43074812 + 7.31 0.000 3' UTR (NM_201523, exon 16 of 16) 3' UTR (NM_201523, exon 16 of 16) -1607 NM_152881 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr4-5507 chr4 84736996 84737206 + 7.31 0.000 intron (NM_014991, intron 41 of 67) intron (NM_014991, intron 41 of 67) 153974 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr11-9270 chr11 44436162 44436372 + 7.31 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -126128 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr5-6795 chr5 94937457 94937667 + 7.31 0.000 intron (NM_001297777, intron 5 of 19) intron (NM_001297777, intron 5 of 19) 144304 NM_001002796 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr4-7294 chr4 53209103 53209313 + 7.31 0.000 intron (NM_152540, intron 4 of 8) intron (NM_152540, intron 4 of 8) 156853 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr9-3367 chr9 124132048 124132258 + 7.31 0.000 Intergenic Intergenic 120385 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr6-3962 chr6 101509173 101509383 + 7.31 0.000 intron (NM_001166247, intron 1 of 16) intron (NM_001166247, intron 1 of 16) 110293 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr8-5336 chr8 6873702 6873912 + 7.31 0.000 intron (NM_005218, intron 1 of 1) MER5A|DNA|hAT-Charlie 4129 NM_005218 1672 Hs.32949 NM_005218 ENSG00000164825 DEFB1 BD1|DEFB-1|DEFB101|HBD1 defensin beta 1 protein-coding chrX-2790 chrX 132648016 132648226 + 7.31 0.000 intron (NM_147175, intron 3 of 3) intron (NM_147175, intron 3 of 3) -19521 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr1-5153 chr1 159142006 159142216 + 7.31 0.000 Intergenic Intergenic -29504 NM_001346510 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr6-2734 chr6 75754206 75754416 + 7.31 0.000 intron (NM_001300899, intron 1 of 32) AluSx1|SINE|Alu 5072 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr3-8150 chr3 30810660 30810870 + 7.31 0.000 intron (NM_207359, intron 11 of 14) intron (NM_207359, intron 11 of 14) 83896 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr2-11077 chr2 121956132 121956342 + 7.31 0.000 Intergenic Intergenic 200586 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr2-7785 chr2 42230999 42231209 + 7.31 0.000 intron (NM_001145076, intron 1 of 21) L2|LINE|L2 -60873 NR_110584 102723824 Hs.639826 NR_110584 LOC102723824 - uncharacterized LOC102723824 ncRNA chr10-8509 chr10 90760164 90760374 + 7.31 0.000 intron (NM_019860, intron 1 of 2) L1MA5A|LINE|L1 97770 NM_019860 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr15-4766 chr15 70093758 70093968 + 7.31 0.000 intron (NM_020908, intron 4 of 19) MIRc|SINE|MIR 926 NM_001282982 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr9-5548 chr9 109579501 109579711 + 7.31 0.000 Intergenic Intergenic -61182 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr22-1782 chr22 29470353 29470563 + 7.31 0.000 Intergenic CpG -9760 NM_021076 4744 Hs.198760 NM_021076 ENSG00000100285 NEFH CMT2CC|NFH neurofilament heavy protein-coding chr14-4612 chr14 52603721 52603931 + 7.31 0.000 intron (NM_001099652, intron 3 of 6) AluSx1|SINE|Alu 50990 NM_001099652 283554 Hs.416214 NM_001099652 ENSG00000180998 GPR137C TM7SF1L2 G protein-coupled receptor 137C protein-coding chr4-4367 chr4 39681889 39682099 + 7.31 0.000 Intergenic MIR|SINE|MIR -16142 NM_001111113 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr9-6043 chr9 136454297 136454507 + 7.31 0.000 intron (NM_014866, intron 20 of 31) intron (NM_014866, intron 20 of 31) -14557 NM_019892 56623 Hs.120998 NM_019892 ENSG00000148384 INPP5E CORS1|CPD4|JBTS1|MORMS|PPI5PIV|pharbin inositol polyphosphate-5-phosphatase E protein-coding chr1-14495 chr1 49233510 49233720 + 7.31 0.000 intron (NM_001323575, intron 4 of 12) intron (NM_001323575, intron 4 of 12) -23796 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr5-8171 chr5 104173838 104174048 + 7.31 0.000 Intergenic MIRc|SINE|MIR -611154 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr13-4032 chr13 73090553 73090763 + 7.31 0.000 Intergenic Intergenic 31653 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr2-11503 chr2 236697593 236697803 + 7.31 0.000 Intergenic Intergenic 127873 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chrX-3883 chrX 5952075 5952285 + 7.31 0.000 intron (NM_001282145, intron 4 of 6) L2|LINE|L2 -274178 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr17-2696 chr17 57862060 57862270 + 7.31 0.000 3' UTR (NM_001292025, exon 11 of 11) 3' UTR (NM_001292025, exon 11 of 11) -12121 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr16-3783 chr16 31009695 31009905 + 7.31 0.000 intron (NM_052874, intron 1 of 9) intron (NM_052874, intron 1 of 9) 838 NM_052874 112755 Hs.542230 NM_052874 ENSG00000099365 STX1B GEFSP9|STX1B1|STX1B2 syntaxin 1B protein-coding chr15-4587 chr15 59587160 59587370 + 7.31 0.000 Intergenic Intergenic -24518 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chrX-4065 chrX 20031851 20032061 + 7.31 0.000 intron (NM_152780, intron 7 of 15) L1MC4|LINE|L1 -14769 NR_037414 100500809 NR_037414 ENSG00000264566 MIR23C hsa-mir-23c|mir-23c microRNA 23c ncRNA chr1-15816 chr1 178491602 178491812 + 7.31 0.000 Intergenic Intergenic -21402 NM_032126 84066 Hs.534501 NM_032126 ENSG00000240021 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding chr12-8323 chr12 129779142 129779352 + 7.31 0.000 intron (NM_133448, intron 1 of 8) MLT1J|LTR|ERVL-MaLR 124778 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr2-9330 chr2 225164913 225165123 + 7.31 0.000 Intergenic Intergenic -122550 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr1-11187 chr1 241476728 241476938 + 7.31 0.000 Intergenic L2c|LINE|L2 42952 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1 fumarate hydratase protein-coding chr11-2625 chr11 11660078 11660288 + 7.31 0.000 Intergenic MLT2C2|LTR|ERVL -3461 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr22-2660 chr22 36172200 36172410 + 7.31 0.000 Intergenic MER83B-int|LTR|ERV1 -6128 NM_145641 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chrX-3044 chrX 100438397 100438607 + 7.31 0.000 Intergenic Intergenic -28229 NM_020766 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr10-4969 chr10 29410606 29410816 + 7.31 0.000 intron (NR_110928, intron 1 of 2) AluSz|SINE|Alu 468 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr17-7445 chr17 12673911 12674121 + 7.31 0.000 intron (NR_104605, intron 2 of 2) intron (NR_104605, intron 2 of 2) 8126 NM_153604 93649 Hs.462257 NM_153604 ENSG00000141052 MYOCD MYCD myocardin protein-coding chr2-5773 chr2 223602332 223602542 + 7.31 0.000 promoter-TSS (NM_003469) promoter-TSS (NM_003469) -76 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr2-4482 chr2 241063664 241063874 + 7.31 0.000 intron (NM_001080437, intron 18 of 31) intron (NM_001080437, intron 18 of 31) 38518 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr7-9718 chr7 156633840 156634050 + 7.31 0.000 intron (NR_026865, intron 1 of 3) MER57A-int|LTR|ERV1 6590 NR_026865 100506380 Hs.647014 NM_032625 ENSG00000182648 LINC01006 C7orf13|MY040 long intergenic non-protein coding RNA 1006 ncRNA chr3-7159 chr3 186287919 186288129 + 7.31 0.000 intron (NM_001346, intron 6 of 24) intron (NM_001346, intron 6 of 24) 74210 NM_001346 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr3-9161 chr3 33269004 33269214 + 7.31 0.000 Intergenic L1PB1|LINE|L1 -7916 NR_146121 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding chr18-1764 chr18 9787747 9787957 + 7.31 0.000 intron (NM_006868, intron 2 of 6) intron (NM_006868, intron 2 of 6) 79551 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr7-6292 chr7 139242351 139242561 + 7.31 0.000 intron (NM_173569, intron 2 of 17) intron (NM_173569, intron 2 of 17) 11219 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr2-3806 chr2 23394354 23394564 + 7.31 0.000 intron (NM_052920, intron 1 of 13) intron (NM_052920, intron 1 of 13) 9280 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr1-14424 chr1 45084398 45084608 + 7.31 0.000 intron (NM_020883, intron 2 of 13) MSTA-int|LTR|ERVL-MaLR 72249 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr13-1983 chr13 23506225 23506435 + 7.31 0.000 Intergenic Intergenic 36818 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr14-5157 chr14 91198701 91198911 + 7.31 0.000 intron (NM_001102368, intron 10 of 13) MIR|SINE|MIR 45898 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr10-4691 chr10 132701849 132702059 + 7.31 0.000 intron (NM_005539, intron 6 of 15) intron (NM_005539, intron 6 of 15) 20679 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr10-5060 chr10 43056017 43056227 + 7.31 0.000 Intergenic Intergenic -20905 NM_020630 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr1-14199 chr1 34453790 34454000 + 7.31 0.000 Intergenic MIRb|SINE|MIR 215799 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr4-7783 chr4 96286907 96287117 + 7.31 0.000 Intergenic Intergenic -23691 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr9-4382 chr9 134870082 134870292 + 7.31 0.000 intron (NR_103451, intron 1 of 1) intron (NR_103451, intron 1 of 1) 2431 NR_103451 101448202 Hs.679677 NR_103451 LOC101448202 - uncharacterized LOC101448202 ncRNA chr14-3189 chr14 72035129 72035339 + 7.19 0.000 intron (NM_001370288, intron 2 of 16) L1MB2|LINE|L1 101707 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr2-11915 chr2 24613029 24613239 + 7.19 0.000 intron (NM_001362950, intron 3 of 23) L1PA15-16|LINE|L1 28657 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr11-8371 chr11 84420371 84420581 + 7.19 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) -103137 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-8631 chr9 129131720 129131930 + 7.19 0.000 intron (NM_178001, intron 6 of 10) intron (NM_178001, intron 6 of 10) 20137 NM_001193397 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr7-4079 chr7 18226444 18226654 + 7.19 0.000 intron (NM_001321872, intron 2 of 11) LTR79|LTR|ERVL -63543 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr2-4079 chr2 129935302 129935512 + 7.19 0.000 intron (NR_110285, intron 3 of 3) intron (NR_110285, intron 3 of 3) -1090 NR_026740 389033 Hs.380682 NR_026740 ENSG00000214100 PLAC9P1 - placenta associated 9 pseudogene 1 pseudo chr5-9120 chr5 174217545 174217755 + 7.19 0.000 Intergenic Intergenic -118704 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr1-13580 chr1 8524000 8524210 + 7.19 0.000 intron (NM_001042681, intron 7 of 22) intron (NM_001042681, intron 7 of 22) -29192 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr11-7522 chr11 9144721 9144931 + 7.19 0.000 intron (NR_145966, intron 18 of 21) intron (NR_145966, intron 18 of 21) 50463 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr14-5334 chr14 102559897 102560107 + 7.19 0.000 Intergenic Intergenic 14748 NR_146561 105370681 NR_146561 ENSG00000259230 LINC02323 - long intergenic non-protein coding RNA 2323 ncRNA chrX-3477 chrX 35348418 35348628 + 7.19 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 405727 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr2-4610 chr2 131154027 131154237 + 7.19 0.000 Intergenic Intergenic 49285 NM_001267064 55041 Hs.469944 NM_017958 ENSG00000115762 PLEKHB2 EVT2 pleckstrin homology domain containing B2 protein-coding chr3-4440 chr3 29013860 29014070 + 7.19 0.000 Intergenic Intergenic 266974 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr1-11236 chr1 246848975 246849185 + 7.19 0.000 intron (NM_015446, intron 33 of 35) intron (NM_015446, intron 33 of 35) 59463 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr4-6855 chr4 9892150 9892360 + 7.19 0.000 intron (NM_001001290, intron 9 of 12) intron (NM_001001290, intron 9 of 12) 110621 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr15-5265 chr15 98940652 98940862 + 7.19 0.000 intron (NM_000875, intron 18 of 20) intron (NM_000875, intron 18 of 20) 64899 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr17-6890 chr17 31796714 31796924 + 7.19 0.000 Intergenic Intergenic 62143 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr1-11803 chr1 26913696 26913906 + 7.19 0.000 exon (NM_021969, exon 1 of 2) exon (NM_021969, exon 1 of 2) 174 NM_021969 8431 Hs.427055 NM_021969 ENSG00000131910 NR0B2 SHP|SHP1 nuclear receptor subfamily 0 group B member 2 protein-coding chr4-5056 chr4 142957921 142958131 + 7.19 0.000 Intergenic L2a|LINE|L2 -111491 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr17-5487 chr17 41612842 41613052 + 7.19 0.000 promoter-TSS (NM_005557) promoter-TSS (NM_005557) -180 NM_005557 3868 Hs.655160 NM_005557 ENSG00000186832 KRT16 CK16|FNEPPK|K16|K1CP|KRT16A|NEPPK|PC1 keratin 16 protein-coding chr12-8106 chr12 119211716 119211926 + 7.19 0.000 Intergenic Intergenic 33031 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr1-13512 chr1 5667259 5667469 + 7.19 0.000 Intergenic Intergenic 195377 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr4-2718 chr4 4107355 4107565 + 7.19 0.000 Intergenic CpG 119434 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr6-3676 chr6 151320135 151320345 + 7.19 0.000 intron (NM_005100, intron 3 of 4) intron (NM_005100, intron 3 of 4) -5291 NM_144497 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr3-10688 chr3 151097927 151098137 + 7.19 0.000 intron (NM_053002, intron 1 of 42) L2c|LINE|L2 11234 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr7-8023 chr7 18798690 18798900 + 7.19 0.000 intron (NM_058176, intron 16 of 22) L1M4|LINE|L1 289525 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr10-9105 chr10 126722119 126722329 + 7.19 0.000 Intergenic MIR|SINE|MIR -51714 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr1-10328 chr1 152361506 152361716 + 7.19 0.000 intron (NR_103779, intron 2 of 2) L2c|LINE|L2 -1605 NM_001014342 388698 Hs.156124 NM_001014342 ENSG00000143520 FLG2 IFPS|PSS6 filaggrin family member 2 protein-coding chr8-5849 chr8 6490389 6490599 + 7.19 0.000 intron (NM_024596, intron 11 of 13) L4_C_Mam|LINE|RTE-X 72751 NM_001147 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr4-8479 chr4 159084129 159084339 + 7.19 0.000 Intergenic AluSz6|SINE|Alu -19817 NM_001351724 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr13-2735 chr13 95980661 95980871 + 7.19 0.000 intron (NM_020121, intron 10 of 38) AluSx|SINE|Alu 72635 NM_020121 55757 Hs.193226 NM_020121 ENSG00000102595 UGGT2 HUGT2|UGCGL2|UGT2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding chr11-2356 chr11 111064199 111064409 + 7.19 0.000 Intergenic Intergenic 33014 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr1-10748 chr1 199404193 199404403 + 7.19 0.000 Intergenic Intergenic 255700 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr1-13012 chr1 161293644 161293854 + 7.19 0.000 Intergenic Intergenic 16219 NM_000530 4359 Hs.591486 NM_000530 ENSG00000158887 MPZ CHM|CHN2|CMT1|CMT1B|CMT2I|CMT2J|CMT4E|CMTDI3|CMTDID|DSS|HMSNIB|MPP|P0 myelin protein zero protein-coding chr3-7228 chr3 194488879 194489089 + 7.19 0.000 TTS (NR_033929) TTS (NR_033929) 1844 NR_033929 401106 Hs.407087 NR_033929 LINC00884 - long intergenic non-protein coding RNA 884 ncRNA chr3-7613 chr3 16130968 16131178 + 7.19 0.000 Intergenic Intergenic -43607 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chrX-4487 chrX 64204877 64205087 + 7.19 0.000 intron (NM_152424, intron 1 of 1) CpG 726 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding chr11-6284 chr11 60510194 60510404 + 7.19 0.000 Intergenic SVA_B|Retroposon|SVA -5093 NM_001012417 503497 Hs.523704 NM_001012417 ENSG00000204979 MS4A13 - membrane spanning 4-domains A13 protein-coding chr2-13893 chr2 180872253 180872463 + 7.19 0.000 intron (NR_104324, intron 4 of 4) L1MA3|LINE|L1 -108027 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr20-2512 chr20 34185842 34186052 + 7.19 0.000 Intergenic MIRb|SINE|MIR -73704 NM_001316363 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr8-4405 chr8 106223937 106224147 + 7.19 0.000 Intergenic LTR33|LTR|ERVL -46136 NM_001198533 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr6-6944 chr6 16296577 16296787 + 7.19 0.000 Intergenic AluJb|SINE|Alu 58095 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr1-9358 chr1 29343370 29343580 + 7.19 0.000 intron (NR_110758, intron 1 of 2) LTR16C|LTR|ERVL 6639 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr12-4638 chr12 44368688 44368898 + 7.19 0.000 intron (NM_001286211, intron 6 of 6) intron (NM_001286211, intron 6 of 6) 506868 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr1-15889 chr1 183339642 183339852 + 7.19 0.000 intron (NM_015039, intron 1 of 10) intron (NM_015039, intron 1 of 10) -34873 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr5-8693 chr5 141863278 141863488 + 7.19 0.000 exon (NM_001278615, exon 2 of 2) exon (NM_001278615, exon 2 of 2) 2819 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr2-12355 chr2 50983173 50983383 + 7.19 0.000 intron (NM_004801, intron 2 of 21) intron (NM_004801, intron 2 of 21) 48854 NM_001330078 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr6-7189 chr6 38708166 38708376 + 7.19 0.000 Intergenic L1ME3E|LINE|L1 -5126 NM_006708 2739 Hs.268849 NM_006708 ENSG00000124767 GLO1 GLOD1|GLYI|HEL-S-74 glyoxalase I protein-coding chr1-7748 chr1 33218744 33218954 + 7.19 0.000 Intergenic Intergenic -36806 NM_018207 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr17-3957 chr17 62966392 62966602 + 7.19 0.000 5' UTR (NM_025185, exon 1 of 26) 5' UTR (NM_025185, exon 1 of 26) 262 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr4-2509 chr4 28893949 28894159 + 7.19 0.000 Intergenic AluYi6|SINE|Alu 74472 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr6-6140 chr6 167044858 167045068 + 7.19 0.000 3' UTR (NM_194429, exon 12 of 12) 3' UTR (NM_194429, exon 12 of 12) 45566 NM_194429 11116 Hs.487175 NM_007045 ENSG00000213066 FGFR1OP FOP FGFR1 oncogene partner protein-coding chr12-5213 chr12 106345893 106346103 + 7.19 0.000 intron (NM_152772, intron 9 of 9) MLT1H|LTR|ERVL-MaLR -11750 NM_018082 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding chr21-1294 chr21 42666995 42667205 + 7.19 0.000 intron (NM_001001575, intron 1 of 14) intron (NM_001001575, intron 1 of 14) 13348 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr14-3220 chr14 74468087 74468297 + 7.19 0.000 Intergenic MIR|SINE|MIR 12012 NR_039858 100616211 NR_039858 ENSG00000283944 MIR4709 mir-4709 microRNA 4709 ncRNA chr15-2328 chr15 91239143 91239353 + 7.19 0.000 intron (NM_001323033, intron 2 of 10) intron (NM_001323033, intron 2 of 10) 137452 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr13-3546 chr13 24277540 24277750 + 7.19 0.000 intron (NM_001286795, intron 1 of 9) MIRb|SINE|MIR 6895 NM_001286795 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr12-1884 chr12 57111142 57111352 + 7.19 0.000 promoter-TSS (NM_001178079) promoter-TSS (NM_001178079) 115 NM_001178081 6778 Hs.524518 NM_003153 ENSG00000166888 STAT6 D12S1644|IL-4-STAT|STAT6B|STAT6C signal transducer and activator of transcription 6 protein-coding chr8-5897 chr8 16928598 16928808 + 7.19 0.000 Intergenic L1PREC2|LINE|L1 73642 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr2-7128 chr2 190070371 190070581 + 7.19 0.000 Intergenic Intergenic -7747 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr5-7902 chr5 76025029 76025239 + 7.19 0.000 Intergenic Intergenic -58249 NM_001297716 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr3-10504 chr3 136506010 136506220 + 7.19 0.000 intron (NM_005862, intron 7 of 33) intron (NM_005862, intron 7 of 33) 246263 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr1-6557 chr1 31235347 31235557 + 7.19 0.000 intron (NM_024522, intron 1 of 6) AluJo|SINE|Alu 4435 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr12-4114 chr12 62957213 62957423 + 7.19 0.000 Intergenic Intergenic -22168 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chrX-1222 chrX 77889114 77889324 + 7.19 0.000 intron (NM_032121, intron 1 of 9) AluJb|SINE|Alu 6216 NM_001367916 84061 Hs.323562 NM_032121 ENSG00000102158 MAGT1 IAP|MRX95|OST3B|PRO0756|SLC58A1|XMEN|bA217H1.1 magnesium transporter 1 protein-coding chr1-13258 chr1 224163209 224163419 + 7.19 0.000 Intergenic Intergenic -19926 NM_003676 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|HLD18|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr4-1830 chr4 94714639 94714849 + 7.19 0.000 Intergenic HAL1b|LINE|L1 42789 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr2-14092 chr2 199748199 199748409 + 7.19 0.000 Intergenic Intergenic 102869 NM_001350853 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding chr11-9481 chr11 62148358 62148568 + 7.19 0.000 intron (NM_001040694, intron 15 of 18) intron (NM_001040694, intron 15 of 18) 24452 NM_001040694 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr2-4446 chr2 198174509 198174719 + 7.19 0.000 Intergenic Intergenic 200483 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2-8451 chr2 121323430 121323640 + 7.19 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -38333 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr5-5691 chr5 162975859 162976069 + 7.19 0.000 Intergenic LTR53|LTR|ERVL -461607 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr5-4770 chr5 54415754 54415964 + 7.19 0.000 TTS (NR_126379) TTS (NR_126379) -39840 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr4-5480 chr4 71289982 71290192 + 7.19 0.000 intron (NM_001098484, intron 3 of 25) L2|LINE|L2 -48966 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr11-8465 chr11 116892007 116892217 + 7.19 0.000 intron (NM_001366686, intron 6 of 24) L2c|LINE|L2 -54162 NM_000039 335 Hs.93194 NM_000039 ENSG00000118137 APOA1 apo(a) apolipoprotein A1 protein-coding chrX-4975 chrX 116121051 116121261 + 7.19 0.000 Intergenic L1M1|LINE|L1 -49588 NM_000686 186 Hs.405348 NM_000686 ENSG00000180772 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor type 2 protein-coding chr4-4619 chr4 79216853 79217063 + 7.19 0.000 intron (NR_038342, intron 4 of 5) intron (NR_038342, intron 4 of 5) 109103 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr1-14023 chr1 26972638 26972848 + 7.19 0.000 Intergenic Intergenic -12275 NM_152365 126695 Hs.188881 NM_152365 ENSG00000175707 KDF1 C1orf172|ECTD12 keratinocyte differentiation factor 1 protein-coding chr3-11091 chr3 185345337 185345547 + 7.19 0.000 intron (NM_001242317, intron 2 of 12) MER1A|DNA|hAT-Charlie -17694 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr8-2819 chr8 127094941 127095151 + 7.19 0.000 Intergenic L3|LINE|CR1 -12825 NR_119373 103164619 Hs.571401 NR_119373 ENSG00000254166 PCAT2 CARLO4|CARLo-4|PCA2|TCONS_00015167 prostate cancer associated transcript 2 ncRNA chr1-10138 chr1 104987538 104987748 + 7.19 0.000 Intergenic L1M8|LINE|L1 631292 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr18-1123 chr18 363006 363216 + 7.19 0.000 intron (NM_130386, intron 2 of 9) intron (NM_130386, intron 2 of 9) -95064 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr1-15584 chr1 160186249 160186459 + 7.19 0.000 exon (NM_144699, exon 21 of 22) exon (NM_144699, exon 21 of 22) -4221 NM_001231 844 Hs.632476 NM_001231 ENSG00000143318 CASQ1 CASQ|PDIB1|VMCQA calsequestrin 1 protein-coding chr16-2794 chr16 53698461 53698671 + 7.19 0.000 intron (NM_001328422, intron 2 of 3) SVA_D|Retroposon|SVA 5293 NM_001328422 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding chr8-7090 chr8 118049848 118050058 + 7.19 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 61866 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr15-3977 chr15 47183992 47184202 + 7.19 0.000 promoter-TSS (NM_001198999) promoter-TSS (NM_001198999) 8 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr4-3336 chr4 2300520 2300730 + 7.19 0.000 intron (NM_020972, intron 8 of 12) intron (NM_020972, intron 8 of 12) -38516 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr18-3290 chr18 53224481 53224691 + 7.19 0.000 intron (NM_005215, intron 12 of 28) L2a|LINE|L2 -12515 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr15-2343 chr15 34122963 34123173 + 7.19 0.000 Intergenic Intergenic 20985 NM_152595 161779 Hs.156317 NM_152595 ENSG00000182405 PGBD4 - piggyBac transposable element derived 4 protein-coding chr2-10461 chr2 216319980 216320190 + 7.19 0.000 intron (NM_020814, intron 1 of 3) intron (NM_020814, intron 1 of 3) 52398 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr10-8035 chr10 63478148 63478358 + 7.19 0.000 intron (NM_001322258, intron 1 of 24) L1ME1|LINE|L1 -12276 NM_032776 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr17-5226 chr17 17141841 17142051 + 7.19 0.000 intron (NM_001364716, intron 7 of 23) intron (NM_001364716, intron 7 of 23) 64387 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr8-4291 chr8 96559118 96559328 + 7.19 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) 65410 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr16-2322 chr16 29220788 29220998 + 7.19 0.000 Intergenic CpG -81394 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr7-4762 chr7 74393653 74393863 + 7.19 0.000 intron (NM_032421, intron 12 of 15) intron (NM_032421, intron 12 of 15) -60148 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr4-8050 chr4 120944471 120944681 + 7.19 0.000 Intergenic L1PA7|LINE|L1 -21710 NM_001300823 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr13-4279 chr13 98285462 98285672 + 7.19 0.000 intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 77043 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr15-4526 chr15 54661228 54661438 + 7.19 0.000 Intergenic Intergenic -395414 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr22-3231 chr22 41758307 41758517 + 7.19 0.000 exon (NM_152513, exon 18 of 31) exon (NM_152513, exon 18 of 31) -42210 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr5-3313 chr5 126335829 126336039 + 7.19 0.000 Intergenic Intergenic -24186 NM_001146319 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr1-15071 chr1 95893923 95894133 + 7.19 0.000 Intergenic MER41B|LTR|ERV1 -98040 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr15-4772 chr15 70424644 70424854 + 7.19 0.000 Intergenic Intergenic 81179 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr11-8773 chr11 9625711 9625921 + 7.19 0.000 Intergenic L2|LINE|L2 -38261 NM_015055 23075 Hs.153026 NM_015055 ENSG00000133789 SWAP70 HSPC321|SWAP-70 switching B cell complex subunit SWAP70 protein-coding chr5-3578 chr5 77180743 77180953 + 7.19 0.000 intron (NM_001349752, intron 1 of 21) CpG 544 NM_001349750 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chrX-2435 chrX 78957067 78957277 + 7.19 0.000 intron (NM_014499, intron 3 of 3) L2|LINE|L2 11781 NM_001324221 27334 Hs.296433 NM_014499 ENSG00000078589 P2RY10 LYPSR2|P2Y10 P2Y receptor family member 10 protein-coding chr1-10839 chr1 204149961 204150171 + 7.19 0.000 intron (NM_001297762, intron 1 of 6) intron (NM_001297762, intron 1 of 6) 1978 NM_001297761 55224 Hs.497469 NM_018208 ENSG00000143845 ETNK2 EKI2|HMFT1716 ethanolamine kinase 2 protein-coding chr1-9403 chr1 31689053 31689263 + 7.19 0.000 intron (NM_001856, intron 23 of 70) intron (NM_001856, intron 23 of 70) 14859 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr15-2323 chr15 81652244 81652454 + 7.19 0.000 Intergenic MER52A|LTR|ERV1 -278136 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr1-11008 chr1 219916021 219916231 + 7.19 0.000 intron (NM_018713, intron 3 of 3) intron (NM_018713, intron 3 of 3) 12525 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr12-6003 chr12 101592251 101592461 + 7.19 0.000 Intergenic Intergenic -2575 NM_001254723 4604 Hs.654589 NM_002465 ENSG00000196091 MYBPC1 LCCS4|MYBPCC|MYBPCS myosin binding protein C, slow type protein-coding chr13-3000 chr13 106619963 106620173 + 7.19 0.000 intron (NR_051977, intron 1 of 3) intron (NR_051977, intron 1 of 3) 2258 NR_051977 283483 Hs.651365 NR_051977 ENSG00000272274 LINC00551 - long intergenic non-protein coding RNA 551 ncRNA chr11-8130 chr11 46553707 46553917 + 7.19 0.000 intron (NM_001267782, intron 1 of 19) intron (NM_001267782, intron 1 of 19) 33632 NR_160027 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr3-10646 chr3 148449796 148450006 + 7.19 0.000 Intergenic L1PB3|LINE|L1 169010 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr9-4352 chr9 130234055 130234265 + 7.19 0.000 3' UTR (NM_001128826, exon 8 of 8) 3' UTR (NM_001128826, exon 8 of 8) -7227 NR_162140 113219459 NR_162140 MIR12126 - microRNA 12126 ncRNA chr3-3807 chr3 15948516 15948726 + 7.19 0.000 Intergenic Intergenic 74850 NR_030289 693148 NR_030289 ENSG00000207815 MIR563 MIRN563|hsa-mir-563 microRNA 563 ncRNA chr9-8063 chr9 97803329 97803539 + 7.19 0.000 intron (NR_147055, intron 5 of 10) GA-rich|Low_complexity|Low_complexity 49646 NR_147055 101928337 NR_147055 ENSG00000236130 PTCSC2 - papillary thyroid carcinoma susceptibility candidate 2 ncRNA chr9-4533 chr9 74989195 74989405 + 7.19 0.000 intron (NR_135282, intron 5 of 6) AluJr|SINE|Alu 36335 NR_121183 101927380 Hs.257556 NR_121183 CARNMT1-AS1 C9orf41-AS1 CARNMT1 antisense RNA 1 ncRNA chr11-10661 chr11 127386787 127386997 + 7.19 0.000 Intergenic Intergenic 115822 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr1-9490 chr1 37070850 37071060 + 7.19 0.000 Intergenic Intergenic -36440 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chrX-798 chrX 57592192 57592402 + 7.19 0.000 exon (NM_007157, exon 1 of 1) exon (NM_007157, exon 1 of 1) 461 NM_007157 158586 Hs.156257 NM_007157 ENSG00000198455 ZXDB ZNF905|dJ83L6.1 zinc finger X-linked duplicated B protein-coding chr5-3311 chr5 125185262 125185472 + 7.19 0.000 intron (NR_109882, intron 4 of 5) L1M1|LINE|L1 148536 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr14-2350 chr14 22140338 22140548 + 7.19 0.000 Intergenic Intergenic 292310 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr21-958 chr21 44306417 44306627 + 7.19 0.000 intron (NM_001002021, intron 4 of 24) intron (NM_001002021, intron 4 of 24) 6469 NM_002626 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr6-3549 chr6 44297292 44297502 + 7.19 0.000 intron (NM_182539, intron 1 of 4) CpG 301 NM_182539 202500 Hs.189183 NM_182539 ENSG00000146221 TCTE1 D6S46|DRC5|FAP155 t-complex-associated-testis-expressed 1 protein-coding chrX-3922 chrX 9549191 9549401 + 7.19 0.000 intron (NM_001139468, intron 3 of 17) MER58D|DNA|hAT-Charlie 84238 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr6-7128 chr6 35717677 35717887 + 7.19 0.000 intron (NM_001145775, intron 2 of 11) intron (NM_001145775, intron 2 of 11) 10801 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr11-5514 chr11 85903520 85903730 + 7.19 0.000 intron (NM_001286159, intron 7 of 10) intron (NM_001286159, intron 7 of 10) 48524 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr10-4534 chr10 96403549 96403759 + 7.19 0.000 intron (NM_012465, intron 10 of 20) LTR5A|LTR|ERVK -44289 NM_001284322 93377 Hs.12449 NM_033207 ENSG00000197430 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding chr1-11531 chr1 160952409 160952619 + 7.19 0.000 intron (NM_080878, intron 3 of 7) intron (NM_080878, intron 3 of 7) 2295 NM_080878 142683 Hs.385631 NM_080878 ENSG00000158764 ITLN2 HL-2|HL2 intelectin 2 protein-coding chr2-12185 chr2 41014307 41014517 + 7.19 0.000 Intergenic L2a|LINE|L2 -501977 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr1-12461 chr1 16375538 16375748 + 7.19 0.000 intron (NR_073500, intron 1 of 1) intron (NR_073500, intron 1 of 1) 8401 NR_073501 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr8-3481 chr8 100711245 100711455 + 7.19 0.000 intron (NM_002568, intron 7 of 14) MER30|DNA|hAT-Charlie -8326 NR_106992 102466854 NR_106992 ENSG00000284570 MIR7705 hsa-mir-7705 microRNA 7705 ncRNA chrX-3391 chrX 2829476 2829686 + 7.19 0.000 intron (NM_001079855, intron 1 of 10) CpG 651 NM_001079855 8908 Hs.567381 NM_003918 ENSG00000056998 GYG2 GN-2|GN2 glycogenin 2 protein-coding chr17-5699 chr17 53737977 53738187 + 7.19 0.000 Intergenic Intergenic -84845 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr13-3924 chr13 58249786 58249996 + 7.19 0.000 Intergenic Intergenic -16774 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr5-6603 chr5 34409604 34409814 + 7.19 0.000 Intergenic Intergenic -164985 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr15-2296 chr15 66366398 66366608 + 7.19 0.000 Intergenic AluSc8|SINE|Alu -9787 NM_001289986 54962 Hs.744308 NM_017858 ENSG00000075131 TIPIN - TIMELESS interacting protein protein-coding chr1-8004 chr1 216658531 216658741 + 7.19 0.000 intron (NM_001243506, intron 2 of 6) AluSx|SINE|Alu 64793 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr8-6238 chr8 38830669 38830879 + 7.19 0.000 intron (NM_001352791, intron 4 of 11) intron (NM_001352791, intron 4 of 11) 25324 NM_001352791 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr22-2594 chr22 30521460 30521670 + 7.19 0.000 Intergenic Intergenic -15870 NM_001161368 284904 Hs.517541 NM_174977 ENSG00000133488 SEC14L4 TAP3 SEC14 like lipid binding 4 protein-coding chrX-1724 chrX 29349181 29349391 + 7.19 0.000 intron (NM_014271, intron 3 of 10) MER39B|LTR|ERV1 -224992 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr19-3703 chr19 33486371 33486581 + 7.19 0.000 intron (NM_001166056, intron 6 of 12) intron (NM_001166056, intron 6 of 12) 35315 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr9-8683 chr9 130725947 130726157 + 7.19 0.000 intron (NM_007313, intron 1 of 10) AluJr|SINE|Alu 12171 NM_007313 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr12-2358 chr12 10634593 10634803 + 7.19 0.000 intron (NM_018423, intron 2 of 10) intron (NM_018423, intron 2 of 10) -21089 NM_018048 55110 Hs.104650 NM_018048 ENSG00000111196 MAGOHB MGN2|mago|magoh mago homolog B, exon junction complex subunit protein-coding chr5-4636 chr5 34586170 34586380 + 7.19 0.000 Intergenic Intergenic -70053 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr13-2929 chr13 20969075 20969285 + 7.19 0.000 Intergenic L1MDa|LINE|L1 -19752 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr15-3755 chr15 63108751 63108961 + 7.19 0.000 Intergenic L2c|LINE|L2 -13005 NM_032857 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr12-5842 chr12 44050478 44050688 + 7.19 0.000 intron (NM_001286212, intron 3 of 6) intron (NM_001286212, intron 3 of 6) 214502 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chrX-2614 chrX 107715652 107715862 + 7.19 0.000 intron (NM_198057, intron 2 of 2) intron (NM_198057, intron 2 of 2) 751 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr15-3757 chr15 63170239 63170449 + 7.19 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -12867 NM_015920 51065 Hs.108957 NM_015920 ENSG00000185088 RPS27L - ribosomal protein S27 like protein-coding chr5-4228 chr5 130976860 130977070 + 7.19 0.000 Intergenic L1MC4|LINE|L1 188291 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr8-6604 chr8 73912717 73912927 + 7.19 0.000 Intergenic HERV9-int|LTR|ERV1 33840 NR_147034 101926947 Hs.521636 NR_147034 LINC01617 C8orf23|NCRNA00249|XLOC_006844 long intergenic non-protein coding RNA 1617 ncRNA chr3-9668 chr3 62460723 62460933 + 7.19 0.000 intron (NM_003716, intron 26 of 29) intron (NM_003716, intron 26 of 29) -87278 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr22-2738 chr22 39493881 39494091 + 7.19 0.000 Intergenic Intergenic -6114 NM_001304564 54471 Hs.728085 NM_013298 ENSG00000100335 MIEF1 AltMIEF1|HSU79252|MID51|MIEF1-MP|SMCR7L|dJ1104E15.3 mitochondrial elongation factor 1 protein-coding chr20-2324 chr20 9417771 9417981 + 7.19 0.000 intron (NM_000933, intron 21 of 35) L1MB7|LINE|L1 -96482 NM_001199897 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chr10-8378 chr10 81205588 81205798 + 7.19 0.000 Intergenic ERVL-B4-int|LTR|ERVL 555896 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr8-3648 chr8 5158774 5158984 + 7.19 0.000 Intergenic LTR16E2|LTR|ERVL -163965 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr11-9383 chr11 55354892 55355102 + 7.19 0.000 Intergenic ERVL-E-int|LTR|ERVL 11796 NM_001005274 81327 Hs.554530 NM_001005274 ENSG00000181961 OR4A16 OR11-117|OR4A16Q olfactory receptor family 4 subfamily A member 16 protein-coding chr7-3604 chr7 31060145 31060355 + 7.19 0.000 intron (NM_001199637, intron 1 of 13) intron (NM_001199637, intron 1 of 13) 7789 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr1-12078 chr1 153306151 153306361 + 7.19 0.000 intron (NM_052891, intron 2 of 6) Tigger19b|DNA|TcMar-Tigger 4462 NM_052891 114771 Hs.348266 NM_052891 ENSG00000159527 PGLYRP3 PGLYRPIalpha|PGRP-Ialpha|PGRPIA peptidoglycan recognition protein 3 protein-coding chr1-4425 chr1 223133682 223133892 + 7.19 0.000 intron (NM_003268, intron 4 of 5) intron (NM_003268, intron 4 of 5) 9461 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr11-5961 chr11 17614238 17614448 + 7.19 0.000 intron (NM_001277269, intron 38 of 54) intron (NM_001277269, intron 38 of 54) 66970 NM_001277269 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding chr15-4340 chr15 40477524 40477734 + 7.19 0.000 Intergenic Intergenic 6668 NM_130468 113189 Hs.442449 NM_130468 ENSG00000169105 CHST14 ATCS|D4ST1|EDSMC1|HNK1ST carbohydrate sulfotransferase 14 protein-coding chr22-2693 chr22 37398631 37398841 + 7.19 0.000 intron (NM_052906, intron 2 of 2) intron (NM_052906, intron 2 of 2) 28734 NR_110512 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr2-10810 chr2 47853571 47853781 + 7.19 0.000 intron (NM_001190274, intron 1 of 22) MIR|SINE|MIR 35043 NM_025133 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr1-14688 chr1 62338120 62338330 + 7.19 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -18791 NM_001320269 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chr15-4527 chr15 54663195 54663405 + 7.19 0.000 Intergenic L1ME3D|LINE|L1 -393447 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr1-15045 chr1 94236188 94236398 + 7.19 0.000 intron (NM_001328664, intron 1 of 22) intron (NM_001328664, intron 1 of 22) 1291 NM_004815 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr3-10439 chr3 132385800 132386010 + 7.19 0.000 Intergenic MIR|SINE|MIR -31597 NM_001329126 23317 Hs.12707 NM_015268 ENSG00000138246 DNAJC13 PARK21|RME8 DnaJ heat shock protein family (Hsp40) member C13 protein-coding chr9-6531 chr9 111909970 111910180 + 7.19 0.000 intron (NM_003358, intron 1 of 8) intron (NM_003358, intron 1 of 8) 13261 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr10-4973 chr10 29839177 29839387 + 7.19 0.000 Intergenic Intergenic -102346 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr1-11948 chr1 67883142 67883352 + 7.19 0.000 intron (NR_040077, intron 1 of 9) L2a|LINE|L2 -49780 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr3-6397 chr3 98292276 98292486 + 7.19 0.000 Intergenic L1PA11|LINE|L1 9493 NM_001005482 79310 Hs.554711 NM_001005482 ENSG00000197938 OR5H2 OR3-10 olfactory receptor family 5 subfamily H member 2 protein-coding chr8-3864 chr8 36904993 36905203 + 7.19 0.000 intron (NM_001031836, intron 19 of 26) intron (NM_001031836, intron 19 of 26) 120724 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr22-2259 chr22 29864084 29864294 + 7.19 0.000 Intergenic L1MD2|LINE|L1 -18980 NM_153050 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding chr15-3710 chr15 46823185 46823395 + 7.19 0.000 Intergenic L1MA1|LINE|L1 -360799 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr14-4046 chr14 55389398 55389608 + 7.19 0.000 intron (NM_014924, intron 4 of 9) intron (NM_014924, intron 4 of 9) 22355 NM_014924 22863 Hs.414809 NM_014924 ENSG00000126775 ATG14 ATG14L|BARKOR|KIAA0831 autophagy related 14 protein-coding chr8-3898 chr8 38839187 38839397 + 7.19 0.000 intron (NM_001352791, intron 7 of 11) intron (NM_001352791, intron 7 of 11) 33842 NM_001352791 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr3-4621 chr3 13570242 13570452 + 7.19 0.000 5' UTR (NM_001998, exon 2 of 17) 5' UTR (NM_001998, exon 2 of 17) 1607 NM_001165035 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr16-3896 chr16 76160576 76160786 + 7.19 0.000 Intergenic Intergenic -116720 NR_136210 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding chrX-3343 chrX 132823679 132823889 + 7.19 0.000 intron (NM_001077188, intron 3 of 5) AluSz|SINE|Alu 137586 NM_147175 90161 Hs.385956 NM_147175 ENSG00000171004 HS6ST2 MRXSPM heparan sulfate 6-O-sulfotransferase 2 protein-coding chr4-2308 chr4 73372721 73372931 + 7.19 0.000 Intergenic Charlie15b|DNA|hAT-Charlie -31461 NM_000477 213 Hs.418167 NM_000477 ENSG00000163631 ALB HSA|PRO0883|PRO0903|PRO1341 albumin protein-coding chr7-5774 chr7 76271673 76271883 + 7.19 0.000 intron (NM_001110199, intron 11 of 14) intron (NM_001110199, intron 11 of 14) -30895 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr2-5050 chr2 241692506 241692716 + 7.19 0.000 intron (NM_001330161, intron 2 of 7) LTR26|LTR|ERV1 5591 NM_001330161 84289 Hs.529172 NM_032329 ENSG00000168395 ING5 p28ING5 inhibitor of growth family member 5 protein-coding chr11-10249 chr11 101396637 101396847 + 7.19 0.000 Intergenic L1P3|LINE|L1 123163 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr15-3921 chr15 35696904 35697114 + 7.19 0.000 intron (NR_038251, intron 1 of 2) intron (NR_038251, intron 1 of 2) 150814 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr3-5552 chr3 4188045 4188255 + 7.19 0.000 Intergenic L1MC1|LINE|L1 -115154 NM_001320677 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr4-8523 chr4 162989790 162990000 + 7.19 0.000 Intergenic Intergenic 103733 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr3-7418 chr3 111539649 111539859 + 7.19 0.000 Intergenic Intergenic -2443 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr6-6672 chr6 164079926 164080136 + 7.19 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -408547 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr2-4085 chr2 133841976 133842186 + 7.19 0.000 Intergenic Intergenic -273618 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr18-3499 chr18 73564180 73564390 + 7.19 0.000 Intergenic Intergenic 239344 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr3-10332 chr3 127179668 127179878 + 7.19 0.000 Intergenic L1MEi|LINE|L1 -13358 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr7-7914 chr7 7336202 7336412 + 7.19 0.000 Intergenic L2|LINE|L2 81153 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr3-10353 chr3 127982169 127982379 + 7.19 0.000 intron (NM_001370224, intron 5 of 6) MER74B|LTR|ERVL 67042 NM_207335 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr4-3742 chr4 79681488 79681698 + 7.19 0.000 Intergenic Intergenic -145878 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr19-4739 chr19 23488978 23489188 + 7.19 0.000 Intergenic L1PA17|LINE|L1 -73009 NR_126448 104472717 Hs.162105 NR_126448 ENSG00000269416 LINC01224 - long intergenic non-protein coding RNA 1224 ncRNA chr4-3475 chr4 123396629 123396839 + 7.19 0.000 promoter-TSS (NM_001258038) promoter-TSS (NM_001258038) -61 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr20-3038 chr20 63346633 63346843 + 7.19 0.000 exon (NM_000744, exon 6 of 6) exon (NM_000744, exon 6 of 6) -13250 NR_110634 100130587 Hs.640129 NR_110634 ENSG00000203900 LOC100130587 - uncharacterized LOC100130587 ncRNA chr1-10590 chr1 175935631 175935841 + 7.19 0.000 Intergenic Intergenic 32743 NR_162097 113839518 NR_162097 MIR1843 - microRNA 1843 ncRNA chr7-8093 chr7 25442445 25442655 + 7.19 0.000 Intergenic AluSc|SINE|Alu -214064 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr3-10120 chr3 113035437 113035647 + 7.19 0.000 Intergenic LTR50|LTR|ERVL -15871 NM_001319109 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr5-2122 chr5 73189878 73190088 + 7.19 0.000 Intergenic Intergenic 11978 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr8-6753 chr8 90694838 90695048 + 7.19 0.000 Intergenic Charlie15a|DNA|hAT-Charlie -48860 NM_001008495 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr17-6644 chr17 66602895 66603105 + 7.19 0.000 intron (NM_002737, intron 3 of 16) MER61A|LTR|ERV1 -184072 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr6-1935 chr6 83096704 83096914 + 7.19 0.000 5' UTR (NM_001199942, exon 2 of 40) 5' UTR (NM_001199942, exon 2 of 40) 29143 NM_001199942 23033 Hs.520246 NM_015018 ENSG00000083097 DOP1A DOP1|DOPEY1|KIAA1117|dJ202D23.2 DOP1 leucine zipper like protein A protein-coding chr14-4363 chr14 24953925 24954135 + 7.19 0.000 intron (NM_001351943, intron 3 of 6) intron (NM_001351943, intron 3 of 6) 94970 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chrX-5275 chrX 139878823 139879033 + 7.19 0.000 intron (NM_001353812, intron 1 of 29) AluJo|SINE|Alu 45303 NR_030230 574508 NR_030230 ENSG00000207633 MIR505 MIRN505|hsa-mir-505|mir-505 microRNA 505 ncRNA chr5-9109 chr5 173265651 173265861 + 7.19 0.000 Intergenic Intergenic -30550 NM_001166176 1482 Hs.54473 NM_004387 ENSG00000183072 NKX2-5 CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3 NK2 homeobox 5 protein-coding chr12-7626 chr12 79976932 79977142 + 7.19 0.000 Intergenic MER102b|DNA|hAT-Charlie -41582 NM_001244990 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr7-7615 chr7 132773408 132773618 + 7.19 0.000 Intergenic L1ME3A|LINE|L1 14543 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr11-6079 chr11 33461753 33461963 + 7.19 0.000 intron (NM_012194, intron 1 of 20) MIR|SINE|MIR 85750 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr3-9973 chr3 97076749 97076959 + 7.19 0.000 intron (NM_001080448, intron 3 of 17) Tigger1|DNA|TcMar-Tigger 262260 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr1-6800 chr1 88225222 88225432 + 7.19 0.000 Intergenic MIR3|SINE|MIR -458817 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr19-5952 chr19 56718310 56718520 + 7.19 0.000 Intergenic Intergenic -46658 NM_001005850 90485 Hs.458438 NM_001005850 ENSG00000127903 ZNF835 BC37295_3 zinc finger protein 835 protein-coding chr7-5659 chr7 56611621 56611831 + 7.19 0.000 Intergenic BSR/Beta|Satellite|Satellite -73596 NR_108099 101928401 Hs.385614 NR_108099 ENSG00000233288 LOC101928401 - uncharacterized LOC101928401 ncRNA chr7-7484 chr7 98528319 98528529 + 7.19 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -88861 NM_002523 4885 Hs.3281 NM_002523 ENSG00000106236 NPTX2 NARP|NP-II|NP2 neuronal pentraxin 2 protein-coding chr7-2123 chr7 30852226 30852436 + 7.19 0.000 intron (NR_037598, intron 13 of 19) intron (NR_037598, intron 13 of 19) -59363 NM_198098 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr16-6888 chr16 84450710 84450920 + 7.19 0.000 intron (NM_001291454, intron 14 of 23) intron (NM_001291454, intron 14 of 23) 16546 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr5-8140 chr5 99764961 99765171 + 7.19 0.000 Intergenic Intergenic 231076 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr8-5491 chr8 53006223 53006433 + 7.19 0.000 Intergenic Intergenic 66420 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr2-11883 chr2 23538647 23538857 + 7.19 0.000 intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 153573 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr14-5442 chr14 105291210 105291420 + 7.19 0.000 intron (NM_001242786, intron 1 of 17) intron (NM_001242786, intron 1 of 17) -9459 NM_001243127 23241 Hs.525626 NM_015197 ENSG00000179364 PACS2 EIEE66|PACS-2|PACS1L phosphofurin acidic cluster sorting protein 2 protein-coding chrX-874 chrX 153626177 153626387 + 7.19 0.000 Intergenic Intergenic -16159 NM_001395 1852 Hs.144879 NM_001395 ENSG00000130829 DUSP9 MKP-4|MKP4 dual specificity phosphatase 9 protein-coding chr6-6431 chr6 97829612 97829822 + 7.19 0.000 Intergenic L4_B_Mam|LINE|RTE-X -194814 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr3-4456 chr3 41985824 41986034 + 7.19 0.000 Intergenic AluSx1|SINE|Alu -23826 NR_136342 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr5-2086 chr5 179975307 179975517 + 7.19 0.000 intron (NM_001280801, intron 5 of 7) MER20|DNA|hAT-Charlie 39985 NR_029885 442908 NR_029885 ENSG00000198995 MIR340 MIRN340|hsa-mir-340|mir-340 microRNA 340 ncRNA chr12-8269 chr12 125161553 125161763 + 7.19 0.000 Intergenic Intergenic -24728 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr12-3751 chr12 44644005 44644215 + 7.19 0.000 intron (NM_006159, intron 14 of 20) intron (NM_006159, intron 14 of 20) 231551 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr11-5683 chr11 133951180 133951390 + 7.19 0.000 intron (NM_001277285, intron 1 of 19) intron (NM_001277285, intron 1 of 19) 5511 NM_001277285 22997 Hs.204121 NM_014987 ENSG00000080854 IGSF9B - immunoglobulin superfamily member 9B protein-coding chr10-8917 chr10 115477429 115477639 + 7.19 0.000 intron (NM_207303, intron 24 of 28) intron (NM_207303, intron 24 of 28) 384169 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr6-4510 chr6 37698079 37698289 + 7.19 0.000 promoter-TSS (NM_153487) promoter-TSS (NM_153487) -301 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr11-5397 chr11 66815698 66815908 + 7.19 0.000 intron (NM_024650, intron 10 of 16) intron (NM_024650, intron 10 of 16) -27638 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr6-5918 chr6 54538932 54539142 + 7.19 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 230596 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr12-8294 chr12 126787407 126787617 + 7.19 0.000 Intergenic Intergenic -15250 NR_033878 387895 Hs.534660 NR_033878 LINC00944 - long intergenic non-protein coding RNA 944 ncRNA chr7-5651 chr7 55521656 55521866 + 7.19 0.000 intron (NM_030796, intron 1 of 4) intron (NM_030796, intron 1 of 4) 5119 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr1-16078 chr1 202700109 202700319 + 7.19 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) 10240 NM_177402 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr21-1696 chr21 29590347 29590557 + 7.19 0.000 intron (NM_000830, intron 10 of 16) intron (NM_000830, intron 10 of 16) -5588 NR_033368 100379661 Hs.659368 NR_033368 ENSG00000156273 GRIK1-AS2 C21orf41|NCRNA00258 GRIK1 antisense RNA 2 ncRNA chr17-3366 chr17 79737862 79738072 + 7.19 0.000 exon (NM_178543, exon 5 of 6) exon (NM_178543, exon 5 of 6) 7024 NM_178543 339221 Hs.114084 NM_178543 ENSG00000182156 ENPP7 ALK-SMase|E-NPP 7|NPP-7|NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 protein-coding chr10-8504 chr10 90467241 90467451 + 7.19 0.000 intron (NR_110657, intron 2 of 6) MER31B|LTR|ERV1 73459 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr3-5518 chr3 196590812 196591022 + 7.19 0.000 Intergenic Intergenic -22243 NM_001345913 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr15-3102 chr15 64443191 64443401 + 7.19 0.000 intron (NM_001321924, intron 11 of 12) L2a|LINE|L2 55460 NM_001321924 9325 Hs.500340 NM_016213 ENSG00000103671 TRIP4 ASC-1|ASC1|HsT17391|MDCDC|SMABF1|ZC2HC5 thyroid hormone receptor interactor 4 protein-coding chr11-10594 chr11 123871062 123871272 + 7.19 0.000 Intergenic Intergenic 14503 NM_001363605 338661 Hs.98377 NM_001013743 ENSG00000204300 TMEM225 PMP22CD|PPP1R154|SPATA47 transmembrane protein 225 protein-coding chr14-1416 chr14 68394509 68394719 + 7.19 0.000 intron (NM_133509, intron 8 of 10) intron (NM_133509, intron 8 of 10) 234173 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr15-4820 chr15 73388464 73388674 + 7.19 0.000 Intergenic Intergenic -19611 NM_005477 10021 Hs.86941 NM_005477 ENSG00000138622 HCN4 SSS2 hyperpolarization activated cyclic nucleotide gated potassium channel 4 protein-coding chr12-7757 chr12 94716562 94716772 + 7.19 0.000 Intergenic MER6A|DNA|TcMar-Tigger -66110 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr9-6044 chr9 136466742 136466952 + 7.19 0.000 intron (NM_014866, intron 6 of 31) intron (NM_014866, intron 6 of 31) -16163 NM_152571 158055 Hs.212613 NM_152571 C9orf163 - chromosome 9 open reading frame 163 protein-coding chr1-7131 chr1 203765393 203765603 + 7.19 0.000 5' UTR (NM_017773, exon 1 of 5) 5' UTR (NM_017773, exon 1 of 5) 315 NM_017773 54900 Hs.272794 NM_017773 ENSG00000122188 LAX1 LAX lymphocyte transmembrane adaptor 1 protein-coding chr5-7378 chr5 21753626 21753836 + 7.19 0.000 intron (NM_004061, intron 14 of 14) L2a|LINE|L2 -130723 NR_132788 106635540 NR_132788 SNORA105B - small nucleolar RNA, H/ACA box 105B snoRNA chr1-9332 chr1 28039488 28039698 + 7.19 0.000 intron (NM_001282562, intron 3 of 16) intron (NM_001282562, intron 3 of 16) 49017 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr1-10099 chr1 97693555 97693765 + 7.19 0.000 intron (NM_000110, intron 6 of 22) intron (NM_000110, intron 6 of 22) -103261 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr5-5003 chr5 82130476 82130686 + 7.19 0.000 intron (NM_031482, intron 3 of 7) L1PA7|LINE|L1 147773 NM_001025 6228 Hs.527193 NM_001025 ENSG00000186468 RPS23 BTDD|MABAS|MCINS|PAMAS|S23|uS12 ribosomal protein S23 protein-coding chr8-5364 chr8 20949343 20949553 + 7.19 0.000 Intergenic L2a|LINE|L2 -4185 NR_130774 102467222 Hs.444226 NR_130773 ENSG00000253147 LOC102467222 - uncharacterized LOC102467222 ncRNA chr5-9148 chr5 176689664 176689874 + 7.19 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 42285 NM_001366492 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr4-4202 chr4 14303964 14304174 + 7.19 0.000 Intergenic L1M3d|LINE|L1 192101 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr20-2228 chr20 63472208 63472418 + 7.19 0.000 exon (NM_172108, exon 1 of 16) exon (NM_172108, exon 1 of 16) 342 NM_004518 3785 Hs.161851 NM_004518 ENSG00000075043 KCNQ2 BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2 potassium voltage-gated channel subfamily Q member 2 protein-coding chr5-3724 chr5 22780814 22781024 + 7.19 0.000 intron (NM_004061, intron 1 of 14) intron (NM_004061, intron 1 of 14) 72425 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr9-2607 chr9 6609578 6609788 + 7.19 0.000 intron (NM_000170, intron 4 of 24) intron (NM_000170, intron 4 of 24) 36009 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr4-4715 chr4 89307915 89308125 + 7.19 0.000 promoter-TSS (NM_198281) promoter-TSS (NM_198281) -220 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr20-1403 chr20 21451425 21451635 + 7.19 0.000 Intergenic MER30|DNA|hAT-Charlie -54004 NM_033176 644524 NM_033176 ENSG00000125816 NKX2-4 NKX2.4|NKX2D NK2 homeobox 4 protein-coding chr22-2613 chr22 32183400 32183610 + 7.19 0.000 Intergenic Intergenic 19972 NM_001098527 10739 Hs.157427 NM_006605 ENSG00000128253 RFPL2 RNF79 ret finger protein like 2 protein-coding chr6-3465 chr6 994254 994464 + 7.19 0.000 intron (NR_027116, intron 2 of 3) intron (NR_027116, intron 2 of 3) 106973 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr2-9519 chr2 237854786 237854996 + 7.19 0.000 Intergenic L1MC4a|LINE|L1 -4732 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr14-2570 chr14 37550508 37550718 + 7.19 0.000 3' UTR (NM_001195296, exon 15 of 15) 3' UTR (NM_001195296, exon 15 of 15) 44636 NM_004496 3169 Hs.163484 NM_004496 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding chr5-4717 chr5 42641022 42641232 + 7.19 0.000 intron (NM_001242403, intron 3 of 9) intron (NM_001242403, intron 3 of 9) 75263 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr16-3332 chr16 2408786 2408996 + 7.19 0.000 intron (NR_003574, intron 11 of 16) intron (NR_003574, intron 11 of 16) -20556 NM_001323538 899 Hs.1973 NM_001761 ENSG00000162063 CCNF FBX1|FBXO1 cyclin F protein-coding chr11-7272 chr11 26472329 26472539 + 7.19 0.000 intron (NM_031418, intron 4 of 26) MIR|SINE|MIR -1468 NM_001313727 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr10-4252 chr10 133420868 133421078 + 7.19 0.000 3' UTR (NM_001012508, exon 2 of 2) 3' UTR (NM_001012508, exon 2 of 2) 3644 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chr12-6655 chr12 988848 989058 + 7.19 0.000 intron (NM_001297419, intron 1 of 11) intron (NM_001297419, intron 1 of 11) 1088 NM_001297419 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr4-5149 chr4 154006597 154006807 + 7.19 0.000 Intergenic MER21C|LTR|ERVL -217619 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr7-4839 chr7 101953568 101953778 + 7.19 0.000 intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 136047 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr10-7313 chr10 132856927 132857137 + 7.19 0.000 intron (NM_001200049, intron 39 of 57) L1MB5|LINE|L1 -70885 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr7-3371 chr7 101164426 101164636 + 7.19 0.000 exon (NM_003378, exon 2 of 2) exon (NM_003378, exon 2 of 2) 1038 NM_003378 7425 Hs.587325 NM_003378 ENSG00000128564 VGF SCG7|SgVII VGF nerve growth factor inducible protein-coding chr1-12248 chr1 218517450 218517660 + 7.19 0.000 intron (NR_146760, intron 1 of 2) intron (NR_146760, intron 1 of 2) 7460 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr8-5115 chr8 63391457 63391667 + 7.19 0.000 Intergenic Intergenic -74287 NR_125825 102724612 Hs.97639 NR_125825 ENSG00000253894 LOC102724612 - uncharacterized LOC102724612 ncRNA chr15-2113 chr15 69388389 69388599 + 7.19 0.000 intron (NM_001104554, intron 5 of 8) intron (NM_001104554, intron 5 of 8) -25855 NM_138555 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr16-6147 chr16 22885760 22885970 + 7.19 0.000 intron (NM_006043, intron 1 of 1) intron (NM_006043, intron 1 of 1) 71703 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr13-2518 chr13 60061784 60061994 + 7.19 0.000 intron (NM_001258367, intron 2 of 25) intron (NM_001258367, intron 2 of 25) 48586 NR_051994 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr12-6148 chr12 3650220 3650430 + 7.19 0.000 intron (NM_001144958, intron 10 of 19) intron (NM_001144958, intron 10 of 19) 102784 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr15-3024 chr15 57679720 57679930 + 7.19 0.000 intron (NM_001018091, intron 12 of 12) intron (NM_001018091, intron 12 of 12) -26696 NM_001018102 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr3-7888 chr3 129324929 129325139 + 7.19 0.000 TTS (NR_026991) TTS (NR_026991) -8748 NM_006026 8971 Hs.75307 NM_006026 ENSG00000184897 H1FX H1.10|H1X H1 histone family member X protein-coding chr19-2085 chr19 45639260 45639470 + 7.19 0.000 promoter-TSS (NM_012155) promoter-TSS (NM_012155) 32 NM_012155 24139 Hs.24178 NM_012155 ENSG00000125746 EML2 ELP70|EMAP-2|EMAP2 EMAP like 2 protein-coding chrX-1562 chrX 50916719 50916929 + 7.19 0.000 TTS (NM_005448) TTS (NM_005448) 6089 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr15-5243 chr15 98000924 98001134 + 7.19 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -2009 NR_146565 105371008 NR_146563 LINC02251 - long intergenic non-protein coding RNA 2251 ncRNA chr20-3800 chr20 22904892 22905102 + 7.19 0.000 Intergenic Intergenic -130423 NM_001052 6754 Hs.673846 NM_001052 ENSG00000132671 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding chr20-4236 chr20 48386440 48386650 + 7.19 0.000 Intergenic L1ME3G|LINE|L1 26634 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr8-5262 chr8 134560107 134560317 + 7.19 0.000 intron (NM_020863, intron 11 of 15) intron (NM_020863, intron 11 of 15) -37859 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr5-6670 chr5 58917464 58917674 + 7.19 0.000 Intergenic Intergenic 82329 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-12502 chr2 63481821 63482031 + 7.19 0.000 intron (NR_148704, intron 7 of 18) A-rich|Low_complexity|Low_complexity -43919 NM_001042692 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr22-3943 chr22 37211509 37211719 + 7.19 0.000 promoter-TSS (NM_001278687) promoter-TSS (NM_001278687) 863 NM_001051 6753 Hs.225995 NM_001051 ENSG00000278195 SSTR3 SS-3-R|SS3-R|SS3R|SSR-28 somatostatin receptor 3 protein-coding chr20-3156 chr20 39110959 39111169 + 7.19 0.000 Intergenic MIRb|SINE|MIR 113684 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr20-1231 chr20 32122001 32122211 + 7.19 0.000 intron (NM_001363731, intron 1 of 17) SVA_D|Retroposon|SVA 12378 NM_001363731 9777 Hs.654665 NM_014742 ENSG00000101337 TM9SF4 dJ836N17.2 transmembrane 9 superfamily member 4 protein-coding chr3-9147 chr3 32314051 32314261 + 7.19 0.000 intron (NM_001320308, intron 1 of 2) intron (NM_001320308, intron 1 of 2) 75476 NM_178868 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr8-5667 chr8 117017541 117017751 + 7.19 0.000 intron (NM_001172813, intron 2 of 10) L2a|LINE|L2 66671 NM_001172813 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr11-7925 chr11 1741301 1741511 + 7.19 0.000 intron (NM_001170820, intron 2 of 2) G-rich|Low_complexity|Low_complexity 9189 NM_001170820 402778 Hs.121575 NM_001170820 ENSG00000244242 IFITM10 DSPA3 interferon induced transmembrane protein 10 protein-coding chr8-3970 chr8 50421410 50421620 + 7.19 0.000 intron (NR_135795, intron 4 of 18) MER41A|LTR|ERV1 257384 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr11-10483 chr11 118084640 118084850 + 7.19 0.000 intron (NM_001173552, intron 1 of 11) MIRb|SINE|MIR 2218 NM_001354434 100526771 Hs.627426 NM_001354434 SMIM35 TMPRSS4-AS1 small integral membrane protein 35 protein-coding chr8-7260 chr8 129550823 129551033 + 7.19 0.000 intron (NR_130917, intron 1 of 3) MIRb|SINE|MIR 24090 NR_130919 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr13-4327 chr13 101557089 101557299 + 7.19 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 67242 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chrX-3362 chrX 142075905 142076115 + 7.19 0.000 Intergenic AluSp|SINE|Alu 129280 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr19-4927 chr19 43562815 43563025 + 7.19 0.000 intron (NM_006297, intron 2 of 16) MIR|SINE|MIR 12658 NM_006297 7515 Hs.98493 NM_006297 ENSG00000073050 XRCC1 RCC|SCAR26 X-ray repair cross complementing 1 protein-coding chr15-4777 chr15 70879956 70880166 + 7.19 0.000 intron (NM_001284357, intron 2 of 16) L2a|LINE|L2 12372 NM_020147 56906 Hs.591123 NM_020147 ENSG00000129028 THAP10 - THAP domain containing 10 protein-coding chr6-8202 chr6 134641124 134641334 + 7.19 0.000 Intergenic Intergenic -101224 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr15-3530 chr15 100785689 100785899 + 7.19 0.000 Intergenic MIRb|SINE|MIR -63958 NR_160704 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA chr7-7050 chr7 140066326 140066536 + 7.19 0.000 Intergenic L1M4|LINE|L1 -2710 NM_022750 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr22-3711 chr22 25102899 25103109 + 7.19 0.000 intron (NR_038941, intron 4 of 4) intron (NR_038941, intron 4 of 4) 9688 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr7-7492 chr7 100600478 100600688 + 7.19 0.000 exon (NM_033506, exon 10 of 10) exon (NM_033506, exon 10 of 10) -1780 NM_002593 5118 Hs.202097 NM_002593 ENSG00000106333 PCOLCE PCPE|PCPE-1|PCPE1 procollagen C-endopeptidase enhancer protein-coding chr8-2066 chr8 123895969 123896179 + 7.19 0.000 intron (NM_001039112, intron 1 of 40) intron (NM_001039112, intron 1 of 40) 44087 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chr13-3040 chr13 28174451 28174661 + 7.19 0.000 intron (NM_175854, intron 2 of 18) intron (NM_175854, intron 2 of 18) -35382 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr18-810 chr18 2570901 2571111 + 7.19 0.000 promoter-TSS (NM_006101) promoter-TSS (NM_006101) 499 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr2-10892 chr2 68066009 68066219 + 7.19 0.000 Intergenic L1PA5|LINE|L1 -3110 NM_173177 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding chr3-9189 chr3 35697492 35697702 + 7.19 0.000 intron (NM_016300, intron 9 of 19) intron (NM_016300, intron 9 of 19) 16657 NM_198399 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr2-10353 chr2 164903452 164903662 + 7.19 0.000 intron (NM_001199148, intron 10 of 10) intron (NM_001199148, intron 10 of 10) 51968 NM_001351537 151258 Hs.658702 NM_173512 ENSG00000169507 SLC38A11 AVT2 solute carrier family 38 member 11 protein-coding chr7-9072 chr7 104563575 104563785 + 7.19 0.000 intron (NM_199000, intron 1 of 2) L1PA2|LINE|L1 235024 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr8-7097 chr8 118221467 118221677 + 7.19 0.000 intron (NM_001101676, intron 4 of 4) intron (NM_001101676, intron 4 of 4) -109753 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr1-13089 chr1 182441804 182442014 + 7.19 0.000 Intergenic Intergenic -8237 NM_001366934 353299 Hs.121200 NM_032267 ENSG00000121446 RGSL1 RGSL|RGSL2 regulator of G protein signaling like 1 protein-coding chr2-7940 chr2 60810182 60810392 + 7.19 0.000 Intergenic Intergenic 54019 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr5-8689 chr5 141779660 141779870 + 7.19 0.000 Intergenic Intergenic 86437 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr14-5237 chr14 98968383 98968593 + 7.19 0.000 Intergenic Intergenic 256875 NR_161368 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr8-7204 chr8 125768356 125768566 + 7.19 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 182736 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr17-8319 chr17 72255079 72255289 + 7.19 0.000 Intergenic Intergenic -87627 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr3-6904 chr3 156531722 156531932 + 7.19 0.000 intron (NM_172159, intron 13 of 13) intron (NM_172159, intron 13 of 13) 22298 NM_001308205 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr14-3313 chr14 86279132 86279342 + 7.19 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 344559 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr15-5236 chr15 97215925 97216135 + 7.19 0.000 Intergenic Intergenic 305781 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chr19-3253 chr19 1947863 1948073 + 7.19 0.000 intron (NM_001319, intron 1 of 11) CpG 6581 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr18-2461 chr18 39188437 39188647 + 7.19 0.000 Intergenic Intergenic 433633 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr8-6537 chr8 68450198 68450408 + 7.19 0.000 intron (NR_146187, intron 3 of 13) Tigger1|DNA|TcMar-Tigger -118812 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr22-3309 chr22 18950731 18950941 + 7.19 0.000 Intergenic Intergenic -14283 NM_001368249 102724788 Hs.517352 NM_001368249 ENSG00000277196 LOC102724788 - proline dehydrogenase 1, mitochondrial protein-coding chr22-2121 chr22 32803061 32803271 + 7.19 0.000 intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 2350 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr9-6460 chr9 87592539 87592749 + 7.19 0.000 intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) 39190 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr11-7367 chr11 72613787 72613997 + 7.19 0.000 intron (NM_001143839, intron 1 of 29) intron (NM_001143839, intron 1 of 29) 1238 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chrX-4718 chrX 88347752 88347962 + 7.19 0.000 Intergenic L1PB3|LINE|L1 -399368 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr9-6544 chr9 115879633 115879843 + 7.19 0.000 Intergenic LTR33|LTR|ERVL 45469 NR_024032 58483 Hs.23367 NR_024032 ENSG00000204148 LINC00474 C9orf27|EST-YD1 long intergenic non-protein coding RNA 474 ncRNA chr12-4630 chr12 42565869 42566079 + 7.19 0.000 intron (NM_153026, intron 1 of 7) intron (NM_153026, intron 1 of 7) 23772 NM_153026 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr10-2463 chr10 20276337 20276547 + 7.19 0.000 intron (NM_032812, intron 13 of 13) intron (NM_032812, intron 13 of 13) -275528 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr11-5637 chr11 121488049 121488259 + 7.19 0.000 exon (NM_003105, exon 4 of 48) exon (NM_003105, exon 4 of 48) 35840 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr5-6447 chr5 166128033 166128243 + 7.19 0.000 Intergenic LTR21B|LTR|ERV1 798232 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr22-2988 chr22 50550467 50550677 + 7.19 0.000 TTS (NM_001123225) TTS (NM_001123225) 4673 NM_138433 113730 Hs.137007 NM_138433 ENSG00000130487 KLHDC7B - kelch domain containing 7B protein-coding chr7-2565 chr7 108383044 108383254 + 7.19 0.000 intron (NR_163871, intron 2 of 29) (CA)n|Simple_repeat|Simple_repeat -54623 NM_001371178 chr15-3321 chr15 79576796 79577006 + 7.19 0.000 Intergenic MSTC|LTR|ERVL-MaLR 144385 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr3-6182 chr3 60146534 60146744 + 7.19 0.000 intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) -65730 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr11-7498 chr11 2892932 2893142 + 7.19 0.000 intron (NM_001302862, intron 2 of 2) intron (NM_001302862, intron 2 of 2) -6654 NM_183233 5002 Hs.50868 NM_002555 ENSG00000110628 SLC22A18 BWR1A|BWSCR1A|HET|IMPT1|ITM|ORCTL2|SLC22A1L|TSSC5|p45-BWR1A solute carrier family 22 member 18 protein-coding chr2-4937 chr2 172103876 172104086 + 7.19 0.000 non-coding (NR_126376, exon 2 of 5) non-coding (NR_126376, exon 2 of 5) 975 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr2-12742 chr2 84378847 84379057 + 7.19 0.000 Intergenic Intergenic 80328 NM_003849 8802 Hs.270428 NM_003849 ENSG00000163541 SUCLG1 GALPHA|MTDPS9|SUCLA1 succinate-CoA ligase alpha subunit protein-coding chr7-6085 chr7 116765211 116765421 + 7.19 0.000 intron (NM_000245, intron 11 of 20) intron (NM_000245, intron 11 of 20) 93120 NM_001324401 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr4-5998 chr4 187738725 187738935 + 7.19 0.000 Intergenic L1PA15-16|LINE|L1 -66189 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LINC02492 - long intergenic non-protein coding RNA 2492 ncRNA chr21-548 chr21 42651123 42651333 + 7.19 0.000 Intergenic L2a|LINE|L2 -2393 NM_002606 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chrX-2461 chrX 82382404 82382614 + 7.19 0.000 Intergenic L1M2|LINE|L1 -1125781 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chrX-4059 chrX 19173051 19173261 + 7.19 0.000 Intergenic AluSz6|SINE|Alu -50519 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr22-2750 chr22 39845255 39845465 + 7.19 0.000 intron (NM_152512, intron 3 of 6) MIR|SINE|MIR 48400 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr22-3591 chr22 20034371 20034581 + 7.19 0.000 intron (NM_001322167, intron 1 of 6) L1MEg|LINE|L1 1337 NR_029706 406961 NR_029706 ENSG00000208023 MIR185 MIRN185|miR-185 microRNA 185 ncRNA chr1-13963 chr1 24785387 24785597 + 7.19 0.000 intron (NM_013943, intron 1 of 5) intron (NM_013943, intron 1 of 5) 40045 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr2-3730 chr2 239084767 239084977 + 7.19 0.000 TTS (NR_039643) TTS (NR_039643) 1054 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr5-2885 chr5 97113797 97114007 + 7.19 0.000 intron (NM_153234, intron 2 of 5) intron (NM_153234, intron 2 of 5) 28709 NM_153234 167410 Hs.656702 NM_153234 ENSG00000145721 LIX1 C5orf11|Lft limb and CNS expressed 1 protein-coding chr3-4757 chr3 99962742 99962952 + 7.19 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) 1551 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr4-1384 chr4 132911999 132912209 + 7.19 0.000 Intergenic AluSc8|SINE|Alu 237012 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA chr17-8080 chr17 54807279 54807489 + 7.19 0.000 Intergenic MER41A|LTR|ERV1 -93307 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr3-9007 chr3 18609269 18609479 + 7.19 0.000 Intergenic L2a|LINE|L2 -163782 NM_001322872 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr16-2588 chr16 86074773 86074983 + 7.19 0.000 Intergenic Intergenic -121303 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chrX-3579 chrX 74432691 74432901 + 7.19 0.000 intron (NM_006517, intron 1 of 5) intron (NM_006517, intron 1 of 5) 11303 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr19-3584 chr19 48607293 48607503 + 7.19 0.000 3' UTR (NM_133498, exon 1 of 1) 3' UTR (NM_133498, exon 1 of 1) 656 NM_133498 171169 Hs.122599 NM_133498 ENSG00000177202 SPACA4 SAMP14 sperm acrosome associated 4 protein-coding chr1-15529 chr1 157013327 157013537 + 7.19 0.000 intron (NM_014784, intron 1 of 39) intron (NM_014784, intron 1 of 39) 32310 NM_014784 9826 Hs.516954 NM_014784 ENSG00000132694 ARHGEF11 GTRAP48|PDZ-RHOGEF Rho guanine nucleotide exchange factor 11 protein-coding chr8-2537 chr8 26609949 26610159 + 7.19 0.000 intron (NM_001244604, intron 3 of 13) intron (NM_001244604, intron 3 of 13) 31649 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr15-2710 chr15 89482682 89482892 + 7.19 0.000 intron (NM_001321041, intron 3 of 10) intron (NM_001321041, intron 3 of 10) 13796 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr1-8108 chr1 9060328 9060538 + 7.19 0.000 intron (NM_003039, intron 1 of 11) (AC)n|Simple_repeat|Simple_repeat 9202 NM_001328621 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr9-7292 chr9 8856988 8857198 + 7.19 0.000 promoter-TSS (NR_121599) promoter-TSS (NR_121599) -925 NR_121599 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr6-7370 chr6 48798031 48798241 + 7.19 0.000 Intergenic LTR13|LTR|ERVK 665117 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr4-5510 chr4 87885896 87886106 + 7.19 0.000 Intergenic MamGypLTR2c|LTR|Gypsy 51298 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr16-4950 chr16 831708 831918 + 7.19 0.000 Intergenic Intergenic 26370 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr6-8058 chr6 121577933 121578143 + 7.19 0.000 Intergenic MER31A|LTR|ERV1 142392 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr4-7902 chr4 105994378 105994588 + 7.19 0.000 Intergenic Intergenic 27995 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chr19-6538 chr19 18812799 18813009 + 7.19 0.000 Intergenic Intergenic -19055 NM_001297549 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr4-6985 chr4 22073884 22074094 + 7.19 0.000 Intergenic MIRb|SINE|MIR -125238 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr5-3214 chr5 84825071 84825281 + 7.19 0.000 Intergenic Intergenic -440296 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr3-7169 chr3 186825611 186825821 + 7.19 0.000 promoter-TSS (NR_125409) promoter-TSS (NR_125409) -195 NR_125409 102724699 Hs.518476 NR_125409 ENSG00000232233 LINC02043 - long intergenic non-protein coding RNA 2043 ncRNA chr7-5388 chr7 32668747 32668957 + 7.19 0.000 intron (NR_036680, intron 5 of 16) intron (NR_036680, intron 5 of 16) 50316 NR_036680 100129460 Hs.633705 NR_036680 DPY19L1P1 - DPY19L1 pseudogene 1 pseudo chr20-3568 chr20 3424490 3424700 + 7.19 0.000 Intergenic AluSq2|SINE|Alu -16933 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr8-2048 chr8 118009112 118009322 + 7.19 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -88304 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr2-11421 chr2 219945861 219946071 + 7.19 0.000 Intergenic Intergenic -39401 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr16-3136 chr16 73312979 73313189 + 7.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR -73721 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr15-1942 chr15 98515184 98515394 + 7.19 0.000 promoter-TSS (NM_182562) promoter-TSS (NM_182562) -953 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding chr7-8275 chr7 38523812 38524022 + 7.19 0.000 intron (NM_001635, intron 2 of 20) L1MC4|LINE|L1 107456 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chrX-3891 chrX 7110008 7110218 + 7.19 0.000 intron (NM_001178135, intron 1 of 3) intron (NM_001178135, intron 1 of 3) -37177 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr2-8484 chr2 126940234 126940444 + 7.19 0.000 Intergenic LTR1D1|LTR|ERV1 41449 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr1-13412 chr1 2147284 2147494 + 7.19 0.000 intron (NM_001350805, intron 4 of 14) (TCCA)n|Simple_repeat|Simple_repeat 36486 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr4-6801 chr4 7686119 7686329 + 7.19 0.000 intron (NM_020777, intron 10 of 26) intron (NM_020777, intron 10 of 26) -67866 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr16-6350 chr16 50508481 50508691 + 7.19 0.000 Intergenic L1ME1|LINE|L1 -39810 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr11-9195 chr11 36789651 36789861 + 7.19 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -191477 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr11-2436 chr11 32557580 32557790 + 7.19 0.000 Intergenic AluSz|SINE|Alu -26146 NM_001307929 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr16-5186 chr16 9890703 9890913 + 7.19 0.000 intron (NM_001134408, intron 4 of 13) intron (NM_001134408, intron 4 of 13) 291259 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr9-3487 chr9 15221070 15221280 + 7.19 0.000 intron (NM_001168342, intron 1 of 17) L1MC4a|LINE|L1 29043 NM_001168342 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr5-8001 chr5 86313807 86314017 + 7.19 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 31468 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr8-7339 chr8 134491512 134491722 + 7.19 0.000 intron (NM_001174158, intron 13 of 13) MLT1D|LTR|ERVL-MaLR -106454 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr1-5878 chr1 3324774 3324984 + 7.19 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -129786 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr5-6353 chr5 137502244 137502454 + 7.19 0.000 Intergenic L2a|LINE|L2 -3023 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr22-3727 chr22 25863495 25863705 + 7.19 0.000 intron (NM_001318245, intron 21 of 43) L1M4a2|LINE|L1 121412 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr12-7230 chr12 51004559 51004769 + 7.19 0.000 intron (NR_033422, intron 5 of 17) intron (NR_033422, intron 5 of 17) 4551 NM_001174130 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr19-3606 chr19 51750095 51750305 + 7.19 0.000 intron (NM_002029, intron 1 of 1) MER33|DNA|hAT-Charlie 1678 NM_001193306 2357 Hs.753 NM_002029 ENSG00000171051 FPR1 FMLP|FPR formyl peptide receptor 1 protein-coding chr7-8298 chr7 39818825 39819035 + 7.19 0.000 Intergenic Intergenic 85362 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr2-7305 chr2 240153598 240153808 + 7.19 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -13045 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr5-4532 chr5 15717057 15717267 + 7.19 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -102160 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr6-6711 chr6 1069540 1069750 + 7.19 0.000 intron (NR_027116, intron 1 of 3) intron (NR_027116, intron 1 of 3) 31687 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr14-4184 chr14 84677858 84678068 + 7.19 0.000 Intergenic Intergenic -593969 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr19-5121 chr19 58527727 58527937 + 7.19 0.000 intron (NM_001316980, intron 1 of 2) AluSx|SINE|Alu -8022 NM_001316979 84878 Hs.515662 NM_032792 ENSG00000119574 ZBTB45 ZNF499 zinc finger and BTB domain containing 45 protein-coding chr18-2660 chr18 49532949 49533159 + 7.19 0.000 Intergenic MER4-int|LTR|ERV1 -29003 NM_006033 9388 Hs.465102 NM_006033 ENSG00000101670 LIPG EDL|EL|PRO719 lipase G, endothelial type protein-coding chr3-10590 chr3 142936256 142936466 + 7.19 0.000 intron (NR_038455, intron 2 of 4) intron (NR_038455, intron 2 of 4) 9686 NR_038455 100507389 Hs.38715 NR_038455 ENSG00000243818 LOC100507389 - uncharacterized LOC100507389 ncRNA chr3-10408 chr3 130470099 130470309 + 7.19 0.000 intron (NM_001278298, intron 38 of 40) intron (NM_001278298, intron 38 of 40) -90130 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr8-7315 chr8 133303389 133303599 + 7.19 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -6190 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr2-14375 chr2 219398947 219399157 + 7.19 0.000 intron (NM_001319116, intron 1 of 14) intron (NM_001319116, intron 1 of 14) 955 NM_001319116 23549 Hs.258551 NM_012100 ENSG00000123992 DNPEP ASPEP|DAP aspartyl aminopeptidase protein-coding chr3-5338 chr3 134008578 134008788 + 7.19 0.000 intron (NM_005630, intron 1 of 13) intron (NM_005630, intron 1 of 13) 21242 NM_005630 6578 Hs.518270 NM_005630 ENSG00000174640 SLCO2A1 MATR1|OATP2A1|PGT|PHOAR2|SLC21A2 solute carrier organic anion transporter family member 2A1 protein-coding chr7-3323 chr7 66833080 66833290 + 7.19 0.000 intron (NR_003934, intron 4 of 10) intron (NR_003934, intron 4 of 10) 11641 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseudogene 1 pseudo chr1-11193 chr1 241919007 241919217 + 7.19 0.000 Intergenic Intergenic -38655 NM_001290693 441925 Hs.731347 NM_001290693 ENSG00000196289 BECN2 BECN1L1|BECN1P1 beclin 2 protein-coding chr8-2270 chr8 94262117 94262327 + 7.19 0.000 promoter-TSS (NM_181702) promoter-TSS (NM_181702) 97 NM_005261 2669 Hs.654463 NM_005261 ENSG00000164949 GEM KIR GTP binding protein overexpressed in skeletal muscle protein-coding chr11-5493 chr11 79816083 79816293 + 7.19 0.000 Intergenic Intergenic -375158 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr6-5695 chr6 121733351 121733561 + 7.19 0.000 Intergenic Intergenic 297810 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr22-3240 chr22 43255573 43255783 + 7.19 0.000 intron (NM_173050, intron 6 of 21) intron (NM_173050, intron 6 of 21) -20264 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr6-4085 chr6 142298198 142298408 + 7.19 0.000 Intergenic Plat_L3|LINE|CR1 -3616 NM_001032394 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr4-4198 chr4 13070877 13071087 + 7.19 0.000 Intergenic Intergenic 413358 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr4-7185 chr4 40951841 40952051 + 7.19 0.000 intron (NM_004307, intron 6 of 17) AluSx1|SINE|Alu -94754 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr8-5110 chr8 62223869 62224079 + 7.19 0.000 Intergenic L1PA7|LINE|L1 -24880 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr9-4568 chr9 89544239 89544449 + 7.19 0.000 Intergenic Intergenic -46371 NM_001371194 chr13-2837 chr13 108383783 108383993 + 7.19 0.000 Intergenic Intergenic 114259 NM_001145645 10673 Hs.525157 NM_006573 ENSG00000102524 TNFSF13B BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4 TNF superfamily member 13b protein-coding chr12-3729 chr12 20185431 20185641 + 7.19 0.000 Intergenic AluSx1|SINE|Alu -57635 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr11-7467 chr11 133081123 133081333 + 7.19 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -137460 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr6-8529 chr6 160347144 160347354 + 7.19 0.000 Intergenic Intergenic -1129 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chrX-3360 chrX 141314886 141315096 + 7.19 0.000 Intergenic Intergenic -72474 NM_022661 64663 Hs.375036 NM_022661 ENSG00000198573 SPANXC CT11.3|CTp11|SPANX-C|SPANX-E|SPANXE SPANX family member C protein-coding chr10-5119 chr10 50021551 50021761 + 7.19 0.000 intron (NR_038275, intron 6 of 6) intron (NR_038275, intron 6 of 6) 33338 NM_001365867 414189 Hs.536158 NM_001077665 ENSG00000204149 AGAP6 AGAP-6|CTGLF3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 6 protein-coding chr17-5193 chr17 13639230 13639440 + 7.19 0.000 Intergenic MER41B|LTR|ERV1 -37406 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chrX-4713 chrX 87914161 87914371 + 7.19 0.000 Intergenic L1PA13|LINE|L1 396464 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr3-6517 chr3 114139538 114139748 + 7.19 0.000 exon (NM_033663, exon 5 of 8) exon (NM_033663, exon 5 of 8) 39133 NM_001290809 1814 Hs.121478 NM_000796 ENSG00000151577 DRD3 D3DR|ETM1|FET1 dopamine receptor D3 protein-coding chr19-4100 chr19 16033214 16033424 + 7.19 0.000 promoter-TSS (NR_024335) promoter-TSS (NR_024335) -394 NR_024335 148231 Hs.631621 NR_024335 ENSG00000167459 LINC00905 - long intergenic non-protein coding RNA 905 ncRNA chr10-6034 chr10 126733625 126733835 + 7.19 0.000 Intergenic Intergenic -63220 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr22-3037 chr22 30752596 30752806 + 7.19 0.000 intron (NM_030758, intron 2 of 13) MER4D1|LTR|ERV1 -11552 NM_001282740 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr14-3298 chr14 84901622 84901832 + 7.19 0.000 Intergenic MIR|SINE|MIR -370205 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr15-4140 chr15 85343469 85343679 + 7.19 0.000 Intergenic Intergenic -37022 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr3-9016 chr3 20575421 20575631 + 7.19 0.000 Intergenic Intergenic 233058 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr17-5535 chr17 43733011 43733221 + 7.19 0.000 Intergenic MER21C|LTR|ERVL 25675 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr16-4256 chr16 22977621 22977831 + 7.19 0.000 Intergenic L1PA4|LINE|L1 163564 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr1-12187 chr1 200429541 200429751 + 7.19 0.000 Intergenic Intergenic -19610 NM_001281294 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr3-2613 chr3 176953640 176953850 + 7.19 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -136744 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr9-8686 chr9 130794544 130794754 + 7.19 0.000 intron (NM_007313, intron 1 of 10) intron (NM_007313, intron 1 of 10) -40605 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr2-5276 chr2 62485867 62486077 + 7.19 0.000 Intergenic Intergenic 20223 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr17-6367 chr17 79702085 79702295 + 7.19 0.000 Intergenic Intergenic 5059 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr15-2411 chr15 66778542 66778752 + 7.19 0.000 intron (NR_027654, intron 4 of 4) MIRc|SINE|MIR 76411 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr3-11098 chr3 185685685 185685895 + 7.19 0.000 intron (NR_138486, intron 7 of 15) AluJr|SINE|Alu -27462 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr11-10386 chr11 113263839 113264049 + 7.19 0.000 3' UTR (NM_001076682, exon 19 of 19) 3' UTR (NM_001076682, exon 19 of 19) 9957 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr5-4972 chr5 79086167 79086377 + 7.19 0.000 intron (NM_001178005, intron 6 of 6) LTR78|LTR|ERV1 16505 NM_017614 23743 Hs.114172 NM_017614 ENSG00000132840 BHMT2 - betaine--homocysteine S-methyltransferase 2 protein-coding chr11-4834 chr11 13914386 13914596 + 7.19 0.000 Intergenic L1PB1|LINE|L1 10372 NR_135052 101928132 Hs.568970 NR_135052 ENSG00000254438 LINC02683 - long intergenic non-protein coding RNA 2683 ncRNA chr5-1823 chr5 88792402 88792612 + 7.19 0.000 intron (NM_001364333, intron 3 of 9) intron (NM_001364333, intron 3 of 9) -6996 NM_001364353 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr1-12712 chr1 54362567 54362777 + 7.19 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 43722 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr13-4023 chr13 72224669 72224879 + 7.19 0.000 Intergenic ERVL-E-int|LTR|ERVL -357570 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr15-3634 chr15 78701722 78701932 + 7.19 0.000 Intergenic AluY|SINE|Alu -50210 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr6-6504 chr6 119267714 119267924 + 7.19 0.000 intron (NM_005907, intron 5 of 12) L1MC5|LINE|L1 81942 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chr7-1688 chr7 149554957 149555167 + 7.19 0.000 intron (NR_027789, intron 4 of 8) SVA_D|Retroposon|SVA -57253 NM_152557 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr10-7359 chr10 1153808 1154018 + 7.19 0.000 Intergenic Intergenic -5855 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr9-4589 chr9 96007543 96007753 + 7.19 0.000 intron (NM_020207, intron 18 of 18) L2a|LINE|L2 14163 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092 long intergenic non-protein coding RNA 92 ncRNA chr1-14301 chr1 38804982 38805192 + 7.19 0.000 Intergenic Intergenic 54685 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr20-1847 chr20 15241689 15241899 + 7.19 0.000 intron (NM_001351663, intron 6 of 17) intron (NM_001351663, intron 6 of 17) 44954 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr21-758 chr21 43194045 43194255 + 7.19 0.000 Intergenic Intergenic 23914 NM_001320719 102724652 Hs.184085 NM_001314050 ENSG00000276076 CRYAA2 CRYAA crystallin alpha A2 protein-coding chr9-5618 chr9 117926364 117926574 + 7.19 0.000 Intergenic Intergenic 222066 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr14-1869 chr14 76375982 76376192 + 7.19 0.000 intron (NM_004452, intron 1 of 10) intron (NM_004452, intron 1 of 10) 4740 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr15-4025 chr15 60322105 60322315 + 7.19 0.000 Intergenic Intergenic 75776 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr7-6864 chr7 49840919 49841129 + 7.19 0.000 intron (NR_136188, intron 2 of 3) intron (NR_136188, intron 2 of 3) 65691 NR_136188 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr7-7318 chr7 45140545 45140755 + 7.19 0.000 Intergenic Intergenic -17141 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr7-5729 chr7 73329451 73329661 + 7.19 0.000 intron (NM_001362789, intron 3 of 7) MamSINE1|SINE|tRNA-RTE 1395 NM_001281304 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr4-7306 chr4 54173301 54173511 + 7.19 0.000 Intergenic MIRc|SINE|MIR -55887 NM_001347828 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chr6-2412 chr6 154966121 154966331 + 7.19 0.000 Intergenic SVA_D|Retroposon|SVA 112866 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C - microRNA 1273c ncRNA chr5-8611 chr5 138981346 138981556 + 7.19 0.000 intron (NM_022464, intron 7 of 9) intron (NM_022464, intron 7 of 9) 106051 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr9-5082 chr9 34386407 34386617 + 7.19 0.000 intron (NM_032596, intron 1 of 6) AluSc|SINE|Alu -4923 NM_147169 84688 Hs.50334 NM_032596 ENSG00000164972 C9orf24 CBE1|NYD-SP22|SMRP1|bA573M23.4 chromosome 9 open reading frame 24 protein-coding chr15-2464 chr15 84550812 84551022 + 7.19 0.000 intron (NR_003661, intron 2 of 5) intron (NR_003661, intron 2 of 5) -19732 NR_038274 100506874 Hs.150824 NR_038273 LINC00933 - long intergenic non-protein coding RNA 933 ncRNA chr4-5272 chr4 174434836 174435046 + 7.19 0.000 Intergenic Intergenic 11146 NR_036236 100423042 NR_036236 ENSG00000265846 MIR4276 - microRNA 4276 ncRNA chr1-11474 chr1 107379165 107379375 + 7.19 0.000 intron (NM_001113226, intron 2 of 6) intron (NM_001113226, intron 2 of 6) 231201 NM_001113228 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr14-4950 chr14 74410471 74410681 + 7.19 0.000 intron (NM_001105579, intron 1 of 3) intron (NM_001105579, intron 1 of 3) 15634 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr1-9779 chr1 56549890 56550100 + 7.19 0.000 intron (NM_003713, intron 1 of 5) intron (NM_003713, intron 1 of 5) 29568 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr2-9939 chr2 240656855 240657065 + 7.19 0.000 Intergenic MER21-int|LTR|ERVL 25925 NM_001102467 653437 Hs.437167 NM_001102467 ENSG00000185176 AQP12B INSSA3 aquaporin 12B protein-coding chr7-6719 chr7 2726861 2727071 + 7.19 0.000 intron (NM_001321766, intron 6 of 6) intron (NM_001321766, intron 6 of 6) 36174 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr10-6464 chr10 33465793 33466003 + 7.19 0.000 Intergenic Intergenic -130993 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr1-7818 chr1 57993041 57993251 + 7.19 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 132565 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr1-16268 chr1 212434148 212434358 + 7.19 0.000 intron (NR_026598, intron 1 of 2) intron (NR_026598, intron 1 of 2) 1333 NR_026598 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr3-4458 chr3 45511490 45511700 + 7.19 0.000 intron (NM_001368263, intron 14 of 20) intron (NM_001368263, intron 14 of 20) -2050 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr8-4015 chr8 58232958 58233168 + 7.19 0.000 Intergenic Intergenic 39038 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr14-4113 chr14 69362566 69362776 + 7.19 0.000 Intergenic Intergenic 35628 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr13-4161 chr13 86758843 86759053 + 7.19 0.000 Intergenic HERVFH21-int|LTR|ERV1 -152972 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr9-5733 chr9 126375516 126375726 + 7.19 0.000 intron (NM_033446, intron 2 of 9) HAL1|LINE|L1 34883 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr3-10739 chr3 155602517 155602727 + 7.19 0.000 intron (NM_001349252, intron 2 of 24) Tigger3a|DNA|TcMar-Tigger 73721 NM_001130960 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr17-2536 chr17 32072123 32072333 + 7.19 0.000 Intergenic Intergenic 31892 NR_033412 6458 Hs.672460 NR_033412 SH3GL1P1 CNSA-P1|SH3GLP1 SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 1 pseudo chr9-7620 chr9 38002361 38002571 + 7.19 0.000 intron (NM_003028, intron 2 of 5) intron (NM_003028, intron 2 of 5) 66761 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr2-9838 chr2 162316152 162316362 + 7.19 0.000 intron (NM_022168, intron 1 of 15) intron (NM_022168, intron 1 of 15) 2427 NM_022168 64135 Hs.163173 NM_022168 ENSG00000115267 IFIH1 AGS7|Hlcd|IDDM19|MDA-5|MDA5|RLR-2|SGMRT1 interferon induced with helicase C domain 1 protein-coding chr6-3265 chr6 151071262 151071472 + 7.19 0.000 intron (NR_146719, intron 27 of 28) intron (NR_146719, intron 27 of 28) -31308 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr12-3287 chr12 74307871 74308081 + 7.19 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -15345 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr5-6305 chr5 122533202 122533412 + 7.19 0.000 Intergenic MER110A|LTR|ERV1 51293 NR_134281 101927357 Hs.639856 NR_134281 LOC101927357 - uncharacterized LOC101927357 ncRNA chr6-5488 chr6 162962145 162962355 + 7.19 0.000 intron (NM_001080379, intron 2 of 4) L2c|LINE|L2 91911 NR_110872 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr1-16645 chr1 240309284 240309494 + 7.19 0.000 intron (NM_020066, intron 8 of 17) LTR41B|LTR|ERVL 217506 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr7-7336 chr7 48083028 48083238 + 7.19 0.000 Intergenic Intergenic -5470 NM_001287426 7378 Hs.488240 NM_003364 ENSG00000183696 UPP1 UDRPASE|UP|UPASE|UPP uridine phosphorylase 1 protein-coding chr7-3255 chr7 4823825 4824035 + 7.19 0.000 intron (NM_018059, intron 5 of 14) intron (NM_018059, intron 5 of 14) 13520 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr2-13766 chr2 170877071 170877281 + 7.19 0.000 Intergenic MIR|SINE|MIR -51301 NM_001201428 26003 Hs.431317 NM_015530 ENSG00000115806 GORASP2 GOLPH6|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding chr8-6165 chr8 32275022 32275232 + 7.19 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -165619 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr12-4740 chr12 51863583 51863793 + 7.19 0.000 Intergenic Intergenic 15465 NR_135803 105369971 Hs.505582 NR_135803 ENSG00000259887 LOC105369971 - uncharacterized LOC105369971 ncRNA chr1-15123 chr1 102183864 102184074 + 7.19 0.000 Intergenic Intergenic -186735 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr2-2755 chr2 197696320 197696530 + 7.19 0.000 Intergenic SVA_D|Retroposon|SVA -8944 NM_138395 92935 Hs.744330 NM_138395 ENSG00000247626 MARS2 COXPD25|MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding chr12-2308 chr12 123025369 123025579 + 7.19 0.000 intron (NM_020845, intron 2 of 24) AluSp|SINE|Alu -14746 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chr22-3181 chr22 32243705 32243915 + 7.19 0.000 intron (NM_014227, intron 5 of 14) AluSz|SINE|Alu 11537 NM_014227 6527 Hs.130101 NM_014227 ENSG00000100191 SLC5A4 DJ90G24.4|SAAT1|SGLT3 solute carrier family 5 member 4 protein-coding chr4-2212 chr4 138495015 138495225 + 7.19 0.000 Intergenic Intergenic 185409 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr3-8510 chr3 133587470 133587680 + 7.19 0.000 3' UTR (NM_001134422, exon 5 of 5) 3' UTR (NM_001134422, exon 5 of 5) 13141 NM_001282765 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chrX-3606 chrX 83733539 83733749 + 7.19 0.000 Intergenic L2a|LINE|L2 -127482 NM_001271680 1538 Hs.444230 NM_021118 ENSG00000183035 CYLC1 CYCL1 cylicin 1 protein-coding chr17-8282 chr17 68064106 68064316 + 7.19 0.000 Intergenic AluSz|SINE|Alu 28251 NM_001320611 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr20-3293 chr20 9756522 9756732 + 7.19 0.000 intron (NM_177990, intron 1 of 9) MER33|DNA|hAT-Charlie 82449 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr18-2192 chr18 60753935 60754145 + 7.19 0.000 Intergenic Intergenic -381265 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr10-8478 chr10 88931556 88931766 + 7.19 0.000 Intergenic L2c|LINE|L2 -1023 NR_125373 100132116 NR_125373 ENSG00000180139 ACTA2-AS1 UC001kfo|ZXF1|uc001kfo.1 ACTA2 antisense RNA 1 ncRNA chr7-3407 chr7 133200105 133200315 + 7.19 0.000 Intergenic Intergenic -52857 NM_001037126 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr9-6779 chr9 27376781 27376991 + 7.19 0.000 intron (NM_024761, intron 2 of 3) intron (NM_024761, intron 2 of 3) -79736 NM_020641 54586 Hs.163070 NM_020641 ENSG00000120160 EQTN AFAF|C9orf11|SPACA8 equatorin protein-coding chr9-7970 chr9 92263920 92264130 + 7.19 0.000 intron (NR_073446, intron 15 of 32) intron (NR_073446, intron 15 of 32) 28522 NR_037424 100500918 NR_037424 ENSG00000281156 MIR3651 mir-3651 microRNA 3651 ncRNA chr7-9735 chr7 157377396 157377606 + 7.19 0.000 intron (NM_001363676, intron 5 of 6) intron (NM_001363676, intron 5 of 6) 40497 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr15-3912 chr15 28810703 28810913 + 7.19 0.000 intron (NR_037599, intron 7 of 13) intron (NR_037599, intron 7 of 13) 20974 NR_037599 646278 Hs.590143 NR_037599 PDCD6IPP2 - PDCD6IP pseudogene 2 pseudo chr16-6793 chr16 78453156 78453366 + 7.19 0.000 intron (NM_001291997, intron 7 of 7) AluSx|SINE|Alu 353607 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr3-8505 chr3 131342478 131342688 + 7.19 0.000 intron (NR_038976, intron 2 of 3) intron (NR_038976, intron 2 of 3) -19262 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr16-6462 chr16 57377221 57377431 + 7.19 0.000 intron (NM_001304392, intron 1 of 1) intron (NM_001304392, intron 1 of 1) 4836 NM_001304392 6376 Hs.531668 NM_002996 ENSG00000006210 CX3CL1 ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin C-X3-C motif chemokine ligand 1 protein-coding chr1-13189 chr1 206942756 206942966 + 7.19 0.000 intron (NM_002644, intron 1 of 10) intron (NM_002644, intron 1 of 10) 3605 NM_002644 5284 Hs.497589 NM_002644 ENSG00000162896 PIGR - polymeric immunoglobulin receptor protein-coding chr18-1410 chr18 2572852 2573062 + 7.19 0.000 intron (NM_006101, intron 1 of 16) intron (NM_006101, intron 1 of 16) 1400 NM_006101 10403 Hs.414407 NM_006101 ENSG00000080986 NDC80 HEC|HEC1|HsHec1|KNTC2|TID3|hsNDC80 NDC80 kinetochore complex component protein-coding chr6-7174 chr6 37804806 37805016 + 7.19 0.000 Intergenic Intergenic -14816 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr7-4140 chr7 74448602 74448812 + 7.19 0.000 Intergenic AluJr|SINE|Alu -5199 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr15-4636 chr15 63172787 63172997 + 7.19 0.000 Intergenic Intergenic -15415 NM_015920 51065 Hs.108957 NM_015920 ENSG00000185088 RPS27L - ribosomal protein S27 like protein-coding chr20-1805 chr20 62426911 62427121 + 7.19 0.000 intron (NM_080833, intron 1 of 13) intron (NM_080833, intron 1 of 13) 523 NM_080833 140893 Hs.180374 NM_080833 ENSG00000130701 RBBP8NL C20orf151 RBBP8 N-terminal like protein-coding chr13-1761 chr13 112117239 112117449 + 7.19 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 10225 NR_120394 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr6-3788 chr6 22700906 22701116 + 7.19 0.000 intron (NR_134614, intron 1 of 2) MLT1D|LTR|ERVL-MaLR 16913 NR_134613 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr9-5999 chr9 134904386 134904596 + 7.19 0.000 3' UTR (NM_002003, exon 9 of 9) 3' UTR (NM_002003, exon 9 of 9) 13421 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr2-8522 chr2 129942390 129942600 + 7.19 0.000 intron (NR_110285, intron 3 of 3) L1PA7|LINE|L1 -8178 NR_026740 389033 Hs.380682 NR_026740 ENSG00000214100 PLAC9P1 - placenta associated 9 pseudogene 1 pseudo chr11-10733 chr11 132258901 132259111 + 7.19 0.000 intron (NM_016522, intron 3 of 6) intron (NM_016522, intron 3 of 6) -25296 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr2-13994 chr2 190602616 190602826 + 7.19 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -46174 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr6-5824 chr6 20877352 20877562 + 7.19 0.000 intron (NM_017774, intron 9 of 15) intron (NM_017774, intron 9 of 15) 343000 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr8-6660 chr8 79935159 79935369 + 7.19 0.000 intron (NM_014018, intron 2 of 2) intron (NM_014018, intron 2 of 2) -63527 NR_110954 101927040 Hs.350876 NR_110954 ENSG00000249328 LOC101927040 - uncharacterized LOC101927040 ncRNA chr3-6936 chr3 159624478 159624688 + 7.19 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 144029 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr19-5454 chr19 33455589 33455799 + 7.19 0.000 intron (NM_001166056, intron 7 of 12) AluJr|SINE|Alu 66097 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr4-8157 chr4 129139072 129139282 + 7.19 0.000 Intergenic Intergenic 43025 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr8-3867 chr8 37311791 37312001 + 7.19 0.000 Intergenic AluJo|SINE|Alu 182017 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr6-4270 chr6 11153845 11154055 + 7.19 0.000 Intergenic L1MEg|LINE|L1 -42225 NM_207582 405754 Hs.631996 NM_207582 ENSG00000244476 ERVFRD-1 ERVFRDE1|GLLL6191|HERV-FRD|HERV-W/FRD|UNQ6191|envFRD endogenous retrovirus group FRD member 1, envelope protein-coding chr7-8228 chr7 33799032 33799242 + 7.19 0.000 Intergenic Intergenic -105778 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr16-6120 chr16 18619189 18619399 + 7.19 0.000 Intergenic AluSz6|SINE|Alu 48046 NR_003569 653190 Hs.13188 NR_003569 ENSG00000256340 ABCC6P1 - ATP binding cassette subfamily C member 6 pseudogene 1 pseudo chr11-7034 chr11 118902627 118902837 + 7.19 0.000 exon (NM_182557, exon 6 of 8) exon (NM_182557, exon 6 of 8) 7810 NM_182557 283149 Hs.414740 NM_182557 ENSG00000186174 BCL9L B9L|BCL9-2|DLNB11 BCL9 like protein-coding chr4-6982 chr4 21738582 21738792 + 7.19 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) -40992 NM_001035003 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr4-5682 chr4 21211314 21211524 + 7.19 0.000 intron (NM_147182, intron 2 of 8) MER1B|DNA|hAT-Charlie 92487 NM_147183 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr2-3887 chr2 42568708 42568918 + 7.19 0.000 intron (NM_001330443, intron 1 of 16) CpG 181 NM_001330443 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr20-3429 chr20 45877999 45878209 + 7.19 0.000 exon (NM_080752, exon 2 of 2) exon (NM_080752, exon 2 of 2) -3123 NM_080603 90204 Hs.517075 NM_080603 ENSG00000168612 ZSWIM1 C20orf162 zinc finger SWIM-type containing 1 protein-coding chr17-8196 chr17 63042805 63043015 + 7.19 0.000 intron (NM_025185, intron 2 of 25) intron (NM_025185, intron 2 of 25) 76675 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr11-6671 chr11 76304152 76304362 + 7.19 0.000 Intergenic AluSx|SINE|Alu 76708 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr10-3837 chr10 1132692 1132902 + 7.19 0.000 TTS (NM_014023) TTS (NM_014023) -26971 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr9-7829 chr9 82706765 82706975 + 7.19 0.000 Intergenic Intergenic 356272 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr4-5711 chr4 36193078 36193288 + 7.19 0.000 intron (NR_146894, intron 7 of 32) intron (NR_146894, intron 7 of 32) 50756 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr1-13220 chr1 212361446 212361656 + 7.19 0.000 3' UTR (NM_001199756, exon 13 of 13) 3' UTR (NM_001199756, exon 13 of 13) 8733 NR_004389 692157 Hs.707958 NR_004389 ENSG00000201544 SNORA16B U98b small nucleolar RNA, H/ACA box 16B snoRNA chr2-9541 chr2 239390881 239391091 + 7.19 0.000 intron (NM_006037, intron 1 of 26) intron (NM_006037, intron 1 of 26) 9963 NM_006037 9759 Hs.20516 NM_006037 ENSG00000068024 HDAC4 AHO3|BDMR|HA6116|HD4|HDAC-4|HDAC-A|HDACA histone deacetylase 4 protein-coding chr11-4835 chr11 14456227 14456437 + 7.19 0.000 Intergenic Intergenic 43526 NM_016451 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr12-7788 chr12 97034150 97034360 + 7.19 0.000 Intergenic Intergenic 126789 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr7-6952 chr7 97929686 97929896 + 7.19 0.000 intron (NR_147989, intron 2 of 18) L2a|LINE|L2 -1350 NM_001352496 440 Hs.489207 NM_001673 ENSG00000070669 ASNS ASNSD|TS11 asparagine synthetase (glutamine-hydrolyzing) protein-coding chr21-1907 chr21 44702710 44702920 + 7.19 0.000 intron (NM_001272037, intron 1 of 12) intron (NM_001272037, intron 1 of 12) 5643 NM_198699 386685 Hs.297526 NM_198699 ENSG00000189169 KRTAP10-12 KAP10.12|KRTAP18-12|KRTAP18.12 keratin associated protein 10-12 protein-coding chr17-8560 chr17 79883342 79883552 + 7.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR -35910 NR_110851 101928738 Hs.399280 NR_110851 ENSG00000262188 LINC01978 - long intergenic non-protein coding RNA 1978 ncRNA chr11-3698 chr11 5878956 5879166 + 7.19 0.000 Intergenic Intergenic -5232 NM_001005165 390081 Hs.553739 NM_001005165 ENSG00000180974 OR52E4 OR11-55 olfactory receptor family 52 subfamily E member 4 protein-coding chr20-3490 chr20 61614987 61615197 + 7.19 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 15331 NM_001252339 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr6-2691 chr6 27374982 27375192 + 7.19 0.000 5' UTR (NM_001322288, exon 1 of 4) 5' UTR (NM_001322288, exon 1 of 4) 287 NR_024553 7754 Hs.8198 NR_002722 ZNF204P ZNF184-Lp|ZNF204|ZNF315P|b24o18.1 zinc finger protein 204, pseudogene pseudo chr8-1907 chr8 29905379 29905589 + 7.19 0.000 Intergenic Intergenic -16029 NR_024473 286135 Hs.376840 NR_024473 ENSG00000253279 LINC02209 FAM183CP long intergenic non-protein coding RNA 2209 ncRNA chr8-7033 chr8 111947278 111947488 + 7.19 0.000 Intergenic Intergenic 570744 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr2-7129 chr2 190197256 190197466 + 7.19 0.000 intron (NM_032321, intron 1 of 1) intron (NM_032321, intron 1 of 1) 16498 NM_001042519 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding chr12-7676 chr12 86495138 86495348 + 7.19 0.000 intron (NM_013244, intron 1 of 6) intron (NM_013244, intron 1 of 6) -237944 NM_001351287 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding chr2-10823 chr2 53891640 53891850 + 7.19 0.000 intron (NM_014614, intron 36 of 46) AluSg|SINE|Alu -31712 NM_001164165 100302652 Hs.40763 NM_001164165 ENSG00000270898 GPR75-ASB3 ASB-3|ASB3 GPR75-ASB3 readthrough protein-coding chr4-6984 chr4 22073133 22073343 + 7.19 0.000 Intergenic Intergenic -124487 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chrX-3991 chrX 15149880 15150090 + 7.19 0.000 Intergenic LTR33B|LTR|ERVL 120098 NM_001031739 140462 Hs.19404 NM_024087 ENSG00000102048 ASB9 - ankyrin repeat and SOCS box containing 9 protein-coding chr1-16201 chr1 207922752 207922962 + 7.19 0.000 Intergenic Intergenic -11732 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr16-4684 chr16 79703470 79703680 + 7.19 0.000 Intergenic MER58B|DNA|hAT-Charlie -66896 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr11-3447 chr11 65546424 65546634 + 7.19 0.000 exon (NM_021070, exon 16 of 27) exon (NM_021070, exon 16 of 27) 11699 NM_001130144 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr8-7337 chr8 134424222 134424432 + 7.19 0.000 Intergenic Intergenic -173744 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr11-6002 chr11 21505310 21505520 + 7.19 0.000 intron (NM_201551, intron 15 of 18) L2c|LINE|L2 -687670 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr2-2656 chr2 206790528 206790738 + 7.19 0.000 exon (NM_001136194, exon 11 of 12) exon (NM_001136194, exon 11 of 12) -7325 NR_036077 100422993 NR_036077 ENSG00000283469 MIR3130-1 MIR3130-3|mir-3130-1 microRNA 3130-1 ncRNA chr13-2669 chr13 84499981 84500191 + 7.19 0.000 intron (NR_046871, intron 3 of 6) MIRb|SINE|MIR -283568 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chrX-4468 chrX 57906811 57907021 + 7.19 0.000 3' UTR (NM_007156, exon 1 of 1) 3' UTR (NM_007156, exon 1 of 1) 3717 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr1-14243 chr1 36583345 36583555 + 7.19 0.000 Intergenic Intergenic -100136 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr10-6080 chr10 130929887 130930097 + 7.19 0.000 Intergenic Intergenic 32676 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr16-5261 chr16 51291636 51291846 + 7.19 0.000 intron (NR_039672, intron 6 of 6) LTR16A|LTR|ERVL -140469 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chrX-3333 chrX 129605806 129606016 + 7.19 0.000 Intergenic Intergenic 49045 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr2-13693 chr2 165161557 165161767 + 7.19 0.000 intron (NM_006922, intron 9 of 27) intron (NM_006922, intron 9 of 27) 42388 NM_006922 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr4-8250 chr4 139578495 139578705 + 7.19 0.000 Intergenic LTR40b|LTR|ERVL -21831 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr4-5503 chr4 82251315 82251525 + 7.19 0.000 Intergenic LTR67B|LTR|ERVL 122571 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr13-3151 chr13 95357901 95358111 + 7.19 0.000 Intergenic LTR8|LTR|ERV1 -56555 NM_001105515 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr18-2380 chr18 75190539 75190749 + 7.19 0.000 Intergenic Intergenic 14869 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr12-7652 chr12 82861497 82861707 + 7.19 0.000 intron (NM_152588, intron 2 of 11) MIRb|SINE|MIR 174447 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-10013 chr2 25114636 25114846 + 7.19 0.000 intron (NM_014971, intron 4 of 22) intron (NM_014971, intron 4 of 22) 53839 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chrX-2769 chrX 130490414 130490624 + 7.19 0.000 Intergenic L2c|LINE|L2 -4422 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr6-5223 chr6 134512296 134512506 + 7.19 0.000 Intergenic Intergenic 27604 NR_125855 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr13-2808 chr13 102370854 102371064 + 7.19 0.000 intron (NR_125912, intron 1 of 1) intron (NR_125912, intron 1 of 1) 3429 NR_125912 100874081 Hs.569296 NR_125912 ENSG00000234445 FGF14-AS1 - FGF14 antisense RNA 1 ncRNA chr9-3024 chr9 124993898 124994108 + 7.19 0.000 intron (NM_173690, intron 15 of 18) intron (NM_173690, intron 15 of 18) -52920 NM_002077 2800 Hs.59504 NM_002077 ENSG00000136935 GOLGA1 golgin-97 golgin A1 protein-coding chr16-6372 chr16 51925489 51925699 + 7.19 0.000 Intergenic Intergenic 148341 NM_001242473 388276 Hs.534669 NM_001242473 C16orf97 - chromosome 16 open reading frame 97 protein-coding chr5-8235 chr5 110048640 110048850 + 7.19 0.000 Intergenic Intergenic 165563 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr11-5499 chr11 81706418 81706628 + 7.19 0.000 Intergenic Intergenic 184313 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr2-5116 chr2 20130278 20130488 + 7.19 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -78755 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr5-3070 chr5 34598118 34598328 + 7.19 0.000 Intergenic Intergenic -58105 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr2-10175 chr2 89682011 89682221 + 7.19 0.000 Intergenic LTR16A1|LTR|ERVL -44209 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr8-5473 chr8 46850869 46851079 + 7.19 0.000 intron (NR_027012, intron 9 of 11) BSR/Beta|Satellite|Satellite 10088 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr11-7317 chr11 61640384 61640594 + 7.19 0.000 Intergenic MER41B|LTR|ERV1 25453 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr10-8843 chr10 110543158 110543368 + 7.19 0.000 Intergenic Intergenic -24428 NM_005445 9126 Hs.24485 NM_005445 ENSG00000108055 SMC3 BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1 structural maintenance of chromosomes 3 protein-coding chr7-9289 chr7 126292221 126292431 + 7.19 0.000 Intergenic L1PA8A|LINE|L1 765858 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr2-12756 chr2 85054706 85054916 + 7.19 0.000 3' UTR (NM_020122, exon 7 of 7) 3' UTR (NM_020122, exon 7 of 7) 12536 NR_146453 100996478 Hs.434398 NR_146453 ENSG00000260840 LINC01964 - long intergenic non-protein coding RNA 1964 ncRNA chr2-2210 chr2 86366359 86366569 + 7.19 0.000 Intergenic Intergenic -28381 NM_001164730 65055 Hs.368884 NM_022912 ENSG00000068615 REEP1 C2orf23|HMN5B|SPG31|Yip2a receptor accessory protein 1 protein-coding chr8-6593 chr8 72366009 72366219 + 7.19 0.000 Intergenic L2a|LINE|L2 -114480 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo chr9-8283 chr9 112906926 112907136 + 7.19 0.000 Intergenic LTR16A|LTR|ERVL -16155 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr12-5929 chr12 71449319 71449529 + 7.19 0.000 intron (NR_110596, intron 1 of 19) intron (NR_110596, intron 1 of 19) 9626 NM_001277227 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding chrX-1012 chrX 45851001 45851211 + 7.19 0.000 intron (NR_125365, intron 1 of 2) CpG 384 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr1-14267 chr1 37028162 37028372 + 7.19 0.000 intron (NM_000831, intron 1 of 15) L3|LINE|CR1 6248 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr13-3700 chr13 37430009 37430219 + 7.19 0.000 Intergenic Intergenic 54670 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chr3-6865 chr3 151308202 151308412 + 7.19 0.000 intron (NM_023915, intron 1 of 2) intron (NM_023915, intron 1 of 2) 8513 NM_023915 53836 Hs.591292 NM_023915 ENSG00000138271 GPR87 FKSG78|GPR95|KPG_002 G protein-coupled receptor 87 protein-coding chr4-6738 chr4 4761444 4761654 + 7.19 0.000 promoter-TSS (NR_125892) promoter-TSS (NR_125892) -211 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr13-4217 chr13 93852166 93852376 + 7.19 0.000 intron (NR_046536, intron 3 of 6) intron (NR_046536, intron 3 of 6) 6202 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr1-7817 chr1 57484822 57485032 + 7.19 0.000 intron (NM_001353980, intron 4 of 5) MIRc|SINE|MIR -60006 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr2-8418 chr2 118404562 118404772 + 7.19 0.000 Intergenic LTR33A|LTR|ERVL 198299 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr10-5497 chr10 80685541 80685751 + 7.19 0.000 Intergenic Intergenic 35849 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr6-8270 chr6 139708870 139709080 + 7.19 0.000 Intergenic Intergenic -62098 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr19-4676 chr19 17488752 17488962 + 7.19 0.000 TTS (NR_147835) TTS (NR_147835) 18333 NM_198580 376497 Hs.363138 NM_198580 ENSG00000130304 SLC27A1 ACSVL5|FATP|FATP-1|FATP1 solute carrier family 27 member 1 protein-coding chr19-2262 chr19 55622152 55622362 + 7.19 0.000 exon (NM_203374, exon 2 of 2) exon (NM_203374, exon 2 of 2) 2318 NM_203374 147808 Hs.53996 NM_203374 ENSG00000179922 ZNF784 - zinc finger protein 784 protein-coding chr11-8554 chr11 132824316 132824526 + 7.19 0.000 intron (NM_001319104, intron 1 of 6) L2a|LINE|L2 119216 NM_002545 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr18-2685 chr18 58013377 58013587 + 7.19 0.000 Intergenic Intergenic -30744 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr5-6374 chr5 139543191 139543401 + 7.19 0.000 Intergenic Intergenic -17870 NM_181838 7322 Hs.108332 NM_003339 ENSG00000131508 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin conjugating enzyme E2 D2 protein-coding chr14-4309 chr14 21672054 21672264 + 7.19 0.000 Intergenic Intergenic -1142 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr1-13842 chr1 20186195 20186405 + 7.19 0.000 intron (NM_152376, intron 1 of 1) CpG 186 NR_110078 101928017 Hs.550803 NR_110078 ENSG00000225986 UBXN10-AS1 - UBXN10 antisense RNA 1 ncRNA chr4-6148 chr4 31934049 31934259 + 7.19 0.000 Intergenic Intergenic -63225 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA chr20-3642 chr20 9359725 9359935 + 7.19 0.000 intron (NM_000933, intron 4 of 35) intron (NM_000933, intron 4 of 35) 52030 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr1-8904 chr1 6240342 6240552 + 7.19 0.000 Intergenic Intergenic -3732 NM_001024598 390992 Hs.532677 NM_001024598 ENSG00000173673 HES3 bHLHb43 hes family bHLH transcription factor 3 protein-coding chr3-5018 chr3 28121114 28121324 + 7.19 0.000 Intergenic Intergenic -120400 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr11-7113 chr11 123546026 123546236 + 7.19 0.000 intron (NM_020716, intron 1 of 19) intron (NM_020716, intron 1 of 19) -14131 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr3-9255 chr3 39209297 39209507 + 7.19 0.000 Intergenic Intergenic -16807 NM_001198621 165904 Hs.447868 NM_194293 ENSG00000168334 XIRP1 CMYA1|Xin xin actin binding repeat containing 1 protein-coding chr9-8162 chr9 104810516 104810726 + 7.19 0.000 intron (NM_005502, intron 29 of 49) intron (NM_005502, intron 29 of 49) 46492 NR_130760 55335 Hs.429294 NM_018376 ENSG00000165028 NIPSNAP3B FP944|NIPSNAP3|SNAP1 nipsnap homolog 3B protein-coding chr1-11139 chr1 235018187 235018397 + 7.19 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 51526 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA chr12-7376 chr12 56858295 56858505 + 7.19 0.000 Intergenic Intergenic 76008 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chr6-5446 chr6 158358939 158359149 + 7.19 0.000 intron (NM_020245, intron 1 of 13) intron (NM_020245, intron 1 of 13) 36062 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr18-3415 chr18 63002600 63002810 + 7.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR 287164 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr2-6893 chr2 95557577 95557787 + 7.19 0.000 Intergenic AluY|SINE|Alu -34319 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chr17-4939 chr17 77622981 77623191 + 7.19 0.000 Intergenic L1MD1|LINE|L1 76145 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr7-6383 chr7 151834792 151835002 + 7.19 0.000 intron (NM_016203, intron 1 of 15) MLT1C|LTR|ERVL-MaLR -20026 NM_001040633 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr5-6565 chr5 17013117 17013327 + 7.19 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -76934 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chrX-4198 chrX 35673364 35673574 + 7.19 0.000 Intergenic L1MB1|LINE|L1 -124873 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr3-4199 chr3 131072905 131073115 + 7.19 0.000 intron (NM_001353038, intron 4 of 18) intron (NM_001353038, intron 4 of 18) 45282 NM_001321223 79858 Hs.657336 NM_024800 ENSG00000114670 NEK11 - NIMA related kinase 11 protein-coding chr22-1589 chr22 49789625 49789835 + 7.19 0.000 intron (NM_001349942, intron 7 of 12) intron (NM_001349942, intron 7 of 12) 34601 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr1-15553 chr1 158472014 158472224 + 7.19 0.000 Intergenic Intergenic 6557 NM_001004473 391109 Hs.690410 NM_001004473 ENSG00000173285 OR10K1 OR1-6 olfactory receptor family 10 subfamily K member 1 protein-coding chr12-3476 chr12 121007610 121007820 + 7.19 0.000 intron (NM_001286197, intron 2 of 4) intron (NM_001286197, intron 2 of 4) 8772 NM_001286195 64897 Hs.528671 NM_022895 ENSG00000157895 C12orf43 Custos chromosome 12 open reading frame 43 protein-coding chr7-7518 chr7 103718495 103718705 + 7.19 0.000 intron (NM_005045, intron 8 of 64) intron (NM_005045, intron 8 of 64) 270916 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr13-3550 chr13 24450094 24450304 + 7.19 0.000 intron (NM_006437, intron 24 of 33) intron (NM_006437, intron 24 of 33) 62579 NM_006437 143 Hs.744855 NM_006437 ENSG00000102699 PARP4 ADPRTL1|ARTD4|PARP-4|PARPL|PH5P|VAULT3|VPARP|VWA5C|p193 poly(ADP-ribose) polymerase family member 4 protein-coding chr19-6407 chr19 14297249 14297459 + 7.19 0.000 Intergenic Intergenic -36389 NR_134916 101928845 Hs.531617 NR_134916 ENSG00000267147 LINC01842 - long intergenic non-protein coding RNA 1842 ncRNA chr17-8114 chr17 57523715 57523925 + 7.19 0.000 promoter-TSS (NR_110808) promoter-TSS (NR_110808) -223 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr21-1209 chr21 44682607 44682817 + 7.19 0.000 promoter-TSS (NM_181686) promoter-TSS (NM_181686) -549 NM_181686 353332 Hs.688628 NM_181686 ENSG00000187175 KRTAP12-1 KAP12.1|KRTAP12.1 keratin associated protein 12-1 protein-coding chr2-8445 chr2 120926407 120926617 + 7.19 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 134231 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chrX-5151 chrX 131233609 131233819 + 7.19 0.000 Intergenic Intergenic 55347 NM_001170963 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr4-5595 chr4 186107340 186107550 + 7.19 0.000 intron (NM_001367768, intron 1 of 13) AluJr|SINE|Alu 2741 NM_001367768 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr6-5466 chr6 159861696 159861906 + 7.19 0.000 Intergenic Intergenic -29187 NM_001366704 4142 Hs.99900 NM_002377 ENSG00000130368 MAS1 MAS|MGRA MAS1 proto-oncogene, G protein-coupled receptor protein-coding chr2-7719 chr2 34041168 34041378 + 7.19 0.000 intron (NR_126403, intron 4 of 5) MIR3|SINE|MIR -25953 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr9-4103 chr9 131043186 131043396 + 7.19 0.000 intron (NM_006059, intron 7 of 27) intron (NM_006059, intron 7 of 27) 34117 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr20-3702 chr20 15526443 15526653 + 7.19 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 329708 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr14-2465 chr14 87181870 87182080 + 7.19 0.000 Intergenic Intergenic 276197 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr2-9005 chr2 195309507 195309717 + 7.19 0.000 Intergenic Intergenic -347346 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr1-8375 chr1 68443090 68443300 + 7.19 0.000 intron (NM_000329, intron 5 of 13) intron (NM_000329, intron 5 of 13) 6759 NM_000329 6121 Hs.2133 NM_000329 ENSG00000116745 RPE65 BCO3|LCA2|RP20|mRPE65|p63|rd12|sRPE65 retinoid isomerohydrolase RPE65 protein-coding chr5-7552 chr5 39058478 39058688 + 7.19 0.000 intron (NM_001285439, intron 2 of 38) intron (NM_001285439, intron 2 of 38) 15816 NM_001285440 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr16-5768 chr16 87661991 87662201 + 7.19 0.000 intron (NM_020655, intron 2 of 4) Charlie4a|DNA|hAT-Charlie 59588 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr19-2715 chr19 30692934 30693144 + 7.19 0.000 intron (NM_001352260, intron 5 of 5) (GA)n|Simple_repeat|Simple_repeat 320655 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chrX-771 chrX 40109120 40109330 + 7.19 0.000 intron (NM_001123384, intron 1 of 13) CpG-29594 -11267 NM_017745 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr1-6030 chr1 66242716 66242926 + 7.19 0.000 intron (NM_001037340, intron 1 of 14) intron (NM_001037340, intron 1 of 14) -89287 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr2-8580 chr2 137482980 137483190 + 7.19 0.000 intron (NM_001316349, intron 15 of 27) intron (NM_001316349, intron 15 of 27) 444847 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr17-3232 chr17 17210689 17210899 + 7.19 0.000 Intergenic Intergenic -4461 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr11-8451 chr11 114440536 114440746 + 7.19 0.000 intron (NM_015523, intron 1 of 6) intron (NM_015523, intron 1 of 6) 1174 NM_015523 25996 Hs.677190 NM_015523 ENSG00000076043 REXO2 CGI-114|REX2|RFN|SFN RNA exonuclease 2 protein-coding chr10-5787 chr10 105106052 105106262 + 7.19 0.000 intron (NM_014978, intron 7 of 26) intron (NM_014978, intron 7 of 26) -439941 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr22-3184 chr22 33146409 33146619 + 7.19 0.000 Intergenic Intergenic 37985 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA chr9-4042 chr9 94649567 94649777 + 7.19 0.000 Intergenic Intergenic -9423 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr19-5492 chr19 43267328 43267538 + 7.19 0.000 intron (NM_001301708, intron 2 of 4) intron (NM_001301708, intron 2 of 4) 2097 NM_001301707 5678 Hs.502092 NM_002784 ENSG00000183668 PSG9 PS34|PSBG-11|PSBG-9|PSG11|PSGII pregnancy specific beta-1-glycoprotein 9 protein-coding chr20-2834 chr20 60088082 60088292 + 7.19 0.000 intron (NR_109918, intron 1 of 4) intron (NR_109918, intron 1 of 4) 501 NR_109917 729296 Hs.534781 NR_109916 LOC729296 - uncharacterized LOC729296 ncRNA chr14-2608 chr14 56786822 56787032 + 7.19 0.000 Intergenic Intergenic 18740 NM_001270525 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding chr2-5584 chr2 173254684 173254894 + 7.19 0.000 intron (NM_016653, intron 16 of 19) intron (NM_016653, intron 16 of 19) 27247 NR_033882 339751 Hs.570083 NR_033882 ENSG00000238133 MAP3K20-AS1 MLK7-AS1 MAP3K20 antisense RNA 1 ncRNA chr15-3600 chr15 60972414 60972624 + 7.19 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 256783 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr11-9598 chr11 65341251 65341461 + 7.19 0.000 intron (NM_001330308, intron 3 of 11) intron (NM_001330308, intron 3 of 11) 7504 NM_001330308 5977 Hs.13495 NM_006268 ENSG00000133884 DPF2 CSS7|REQ|UBID4|ubi-d4 double PHD fingers 2 protein-coding chr7-8801 chr7 82888144 82888354 + 7.19 0.000 intron (NM_033026, intron 9 of 24) intron (NM_033026, intron 9 of 24) 274635 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr10-4860 chr10 15155828 15156038 + 7.19 0.000 promoter-TSS (NR_036506) promoter-TSS (NR_036506) -586 NR_036506 100192204 Hs.714691 NR_036506 ENSG00000206448 PPIAP30 - peptidylprolyl isomerase A pseudogene 30 pseudo chr4-5358 chr4 185721554 185721764 + 7.19 0.000 intron (NM_001145672, intron 1 of 20) intron (NM_001145672, intron 1 of 20) 54195 NM_001145673 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chrX-1413 chrX 23667847 23668057 + 7.19 0.000 intron (NM_006406, intron 1 of 6) intron (NM_006406, intron 1 of 6) 459 NM_006406 10549 Hs.83383 NM_006406 ENSG00000123131 PRDX4 AOE37-2|AOE372|HEL-S-97n|PRX-4 peroxiredoxin 4 protein-coding chr10-5116 chr10 49520014 49520224 + 7.19 0.000 intron (NM_001277058, intron 5 of 5) intron (NM_001277058, intron 5 of 5) 4162 NM_170753 267004 Hs.49063 NM_170753 ENSG00000225830 PGBD3 - piggyBac transposable element derived 3 protein-coding chr7-7417 chr7 75019954 75020164 + 7.19 0.000 exon (NM_001145064, exon 6 of 9) exon (NM_001145064, exon 6 of 9) 53743 NM_001363447 81554 Hs.529623 NM_030798 ENSG00000274523 RCC1L WBSCR16 RCC1 like protein-coding chr1-16453 chr1 227544333 227544543 + 7.19 0.000 Intergenic Intergenic -19118 NM_178549 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr3-8344 chr3 74893272 74893482 + 7.19 0.000 Intergenic LTR16C|LTR|ERVL -321099 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr8-5106 chr8 60278018 60278228 + 7.19 0.000 intron (NR_135821, intron 2 of 9) intron (NR_135821, intron 2 of 9) 3277 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr10-4074 chr10 44421720 44421930 + 7.19 0.000 Intergenic Intergenic -36728 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr6-7417 chr6 52646993 52647203 + 7.19 0.000 Intergenic Intergenic -17303 NR_024403 730101 Hs.7921 NR_024403 ENSG00000216775 LOC730101 - uncharacterized LOC730101 ncRNA chr19-4860 chr19 39154998 39155208 + 7.19 0.000 intron (NM_001014834, intron 1 of 7) intron (NM_001014834, intron 1 of 7) 29317 NM_001014834 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr4-6202 chr4 52406043 52406253 + 7.19 0.000 Intergenic MIRb|SINE|MIR 250391 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding chr3-4911 chr3 189270333 189270543 + 7.19 0.000 intron (NM_198485, intron 4 of 5) intron (NM_198485, intron 4 of 5) -29844 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr18-1327 chr18 75277205 75277415 + 7.19 0.000 intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 65781 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr6-7891 chr6 107870731 107870941 + 7.19 0.000 3' UTR (NM_007214, exon 21 of 21) 3' UTR (NM_007214, exon 21 of 21) -46523 NM_198081 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr17-2441 chr17 17319145 17319355 + 7.19 0.000 intron (NM_020201, intron 2 of 4) L1MB7|LINE|L1 15877 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr1-12303 chr1 240462635 240462845 + 7.19 0.000 intron (NM_020066, intron 16 of 17) L2c|LINE|L2 149415 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr2-12258 chr2 44868861 44869071 + 7.19 0.000 Intergenic Intergenic 69922 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr19-5853 chr19 43738718 43738928 + 7.19 0.000 intron (NM_019108, intron 7 of 13) intron (NM_019108, intron 7 of 13) 16139 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr15-5145 chr15 90891358 90891568 + 7.19 0.000 intron (NM_001143783, intron 9 of 16) intron (NM_001143783, intron 9 of 16) 6417 NM_001143783 2242 Hs.7636 NM_002005 ENSG00000182511 FES FPS FES proto-oncogene, tyrosine kinase protein-coding chrX-2924 chrX 152929256 152929466 + 7.19 0.000 intron (NM_007150, intron 12 of 22) L2c|LINE|L2 11496 NM_001178113 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr1-5879 chr1 3344858 3345068 + 7.19 0.000 intron (NM_022114, intron 3 of 16) L1MEb|LINE|L1 -109702 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr19-4552 chr19 10467309 10467519 + 7.19 0.000 exon (NM_001111308, exon 15 of 15) exon (NM_001111308, exon 15 of 15) 14482 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr14-3250 chr14 76920192 76920402 + 7.19 0.000 Intergenic Intergenic -39341 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr3-10301 chr3 126183218 126183428 + 7.19 0.000 intron (NR_046383, intron 1 of 1) MLT1F1-int|LTR|ERVL-MaLR -2137 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr1-7451 chr1 59272598 59272808 + 7.19 0.000 Intergenic Intergenic -24110 NM_001350796 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr7-7233 chr7 24467085 24467295 + 7.19 0.000 Intergenic AluSp|SINE|Alu -106262 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr16-6187 chr16 26485545 26485755 + 7.19 0.000 Intergenic MLT2F|LTR|ERVL 460413 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr16-6454 chr16 57127505 57127715 + 7.19 0.000 intron (NM_152727, intron 11 of 15) MER117|DNA|hAT-Charlie 35027 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr1-9877 chr1 67021871 67022081 + 7.19 0.000 intron (NM_015139, intron 8 of 11) intron (NM_015139, intron 8 of 11) 32172 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr14-4081 chr14 64827995 64828205 + 7.19 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) -4720 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr20-2491 chr20 33125716 33125926 + 7.19 0.000 Intergenic Intergenic -35949 NM_001319164 140683 Hs.125960 NM_080574 ENSG00000131050 BPIFA2 C20orf70|PSP|SPLUNC2|bA49G10.1 BPI fold containing family A member 2 protein-coding chr1-13986 chr1 25533011 25533221 + 7.19 0.000 Intergenic L2a|LINE|L2 -10469 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr7-6595 chr7 89935321 89935531 + 7.19 0.000 intron (NR_110029, intron 2 of 2) L1MA10|LINE|L1 -183974 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr12-3718 chr12 8890934 8891144 + 7.19 0.000 Intergenic MER110A|LTR|ERV1 -23470 NM_004426 1911 Hs.744902 NM_004426 ENSG00000111752 PHC1 EDR1|HPH1|MCPH11|RAE28 polyhomeotic homolog 1 protein-coding chr11-7270 chr11 25861849 25862059 + 7.19 0.000 Intergenic Intergenic -327169 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr5-5956 chr5 104297761 104297971 + 7.19 0.000 Intergenic L2a|LINE|L2 -735077 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr2-7928 chr2 59880735 59880945 + 7.19 0.000 Intergenic Intergenic 502196 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chrX-2064 chrX 19518490 19518700 + 7.19 0.000 Intergenic Intergenic -3334 NM_001001671 389840 Hs.713701 NM_001001671 ENSG00000180815 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding chr4-8506 chr4 161305479 161305689 + 7.19 0.000 Intergenic THE1B|LTR|ERVL-MaLR -717149 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr1-6201 chr1 206569014 206569224 + 7.19 0.000 intron (NM_182665, intron 1 of 4) LTR49|LTR|ERV1 11955 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr9-8323 chr9 114799407 114799617 + 7.19 0.000 intron (NM_005118, intron 1 of 3) intron (NM_005118, intron 1 of 3) 6527 NM_005118 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr1-12452 chr1 15965357 15965567 + 7.19 0.000 intron (NM_001287603, intron 2 of 15) L1ME3F|LINE|L1 10670 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr8-4652 chr8 135094084 135094294 + 7.19 0.000 Intergenic L2c|LINE|L2 -139942 NR_120396 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA chr12-4137 chr12 73877592 73877802 + 7.19 0.000 Intergenic LTR2B|LTR|ERV1 414934 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr16-3383 chr16 66961226 66961436 + 7.19 0.000 promoter-TSS (NM_024922) promoter-TSS (NM_024922) 65 NM_001185177 23491 Hs.268700 NM_012122 ENSG00000172828 CES3 ES31 carboxylesterase 3 protein-coding chr10-4547 chr10 99598965 99599175 + 7.19 0.000 Intergenic Intergenic 21369 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding chr4-4347 chr4 38060838 38061048 + 7.19 0.000 intron (NM_001253912, intron 14 of 20) intron (NM_001253912, intron 14 of 20) -49238 NM_001253913 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr2-8406 chr2 116125381 116125591 + 7.19 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 781671 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr10-6944 chr10 62582086 62582296 + 7.19 0.000 intron (NM_199452, intron 1 of 6) intron (NM_199452, intron 1 of 6) 61743 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr10-9104 chr10 126716715 126716925 + 7.19 0.000 Intergenic L4_A_Mam|LINE|RTE-X -46310 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr7-5719 chr7 71089919 71090129 + 7.19 0.000 Intergenic AluJb|SINE|Alu -42120 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr2-12690 chr2 76356993 76357203 + 7.19 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -628867 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr3-4004 chr3 59101562 59101772 + 7.19 0.000 Intergenic MER57-int|LTR|ERV1 -51635 NM_001351534 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr10-4636 chr10 124018821 124019031 + 7.19 0.000 TTS (NM_001270765) TTS (NM_001270765) 73480 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr8-3318 chr8 30475810 30476020 + 7.19 0.000 intron (NM_001008710, intron 2 of 8) intron (NM_001008710, intron 2 of 8) -90514 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr15-1650 chr15 98875641 98875851 + 7.19 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 91320 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chrX-1504 chrX 8408261 8408471 + 7.19 0.000 Intergenic L1M5|LINE|L1 -56464 NM_001001888 425054 Hs.279737 NM_001001888 ENSG00000205642 VCX3B VCX-C|VCXC variable charge X-linked 3B protein-coding chr6-3748 chr6 10444170 10444380 + 7.19 0.000 intron (NR_132993, intron 1 of 3) L1ME2z|LINE|L1 4558 NR_049872 100846998 NR_049872 ENSG00000263705 MIR5689 - microRNA 5689 ncRNA chr7-5642 chr7 54790601 54790811 + 7.19 0.000 intron (NR_110040, intron 2 of 2) intron (NR_110040, intron 2 of 2) 31393 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr16-4996 chr16 20431019 20431229 + 7.19 0.000 intron (NM_017888, intron 9 of 13) intron (NM_017888, intron 9 of 13) -20397 NM_001308954 123876 Hs.298252 NM_001010845 ENSG00000183747 ACSM2A A-923A4.1|ACSM2 acyl-CoA synthetase medium chain family member 2A protein-coding chr3-9951 chr3 94225515 94225725 + 7.19 0.000 Intergenic Intergenic 162559 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr2-9406 chr2 231634548 231634758 + 7.19 0.000 Intergenic Intergenic 41789 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr1-10420 chr1 157895256 157895466 + 7.19 0.000 Intergenic MER66B|LTR|ERV1 -30606 NR_135760 105371458 Hs.591494 NR_135760 ENSG00000236957 LOC105371458 - uncharacterized LOC105371458 ncRNA chr3-5861 chr3 34212360 34212570 + 7.19 0.000 Intergenic LTR16A2|LTR|ERVL 413835 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr10-2871 chr10 86961591 86961801 + 7.19 0.000 intron (NM_001330120, intron 5 of 6) intron (NM_001330120, intron 5 of 6) 3097 NM_003087 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chr21-1947 chr21 45880609 45880819 + 7.19 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 30753 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr10-5144 chr10 52082272 52082482 + 7.19 0.000 intron (NM_001098512, intron 7 of 17) intron (NM_001098512, intron 7 of 17) 231751 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr13-3159 chr13 99919610 99919820 + 7.19 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) 37450 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr17-4076 chr17 79113431 79113641 + 7.19 0.000 intron (NM_001082575, intron 5 of 14) intron (NM_001082575, intron 5 of 14) 38599 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr5-6030 chr5 160750759 160750969 + 7.19 0.000 intron (NM_001366652, intron 2 of 24) L2c|LINE|L2 -65473 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr6-1849 chr6 19939503 19939713 + 7.19 0.000 Intergenic SVA_D|Retroposon|SVA 102238 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr11-8064 chr11 29294013 29294223 + 7.19 0.000 Intergenic Intergenic -300295 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr1-7726 chr1 28812338 28812548 + 7.19 0.000 exon (NM_000911, exon 1 of 3) exon (NM_000911, exon 1 of 3) 273 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chr4-5568 chr4 156977489 156977699 + 7.19 0.000 Intergenic Intergenic -5795 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr4-5707 chr4 33487126 33487336 + 7.19 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 552662 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr17-4871 chr17 65697158 65697368 + 7.19 0.000 intron (NR_126542, intron 2 of 5) intron (NR_126542, intron 2 of 5) 129188 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chrX-2949 chrX 154012795 154013005 + 7.19 0.000 intron (NM_001569, intron 12 of 13) intron (NM_001569, intron 12 of 13) 7002 NM_001569 3654 Hs.522819 NM_001569 ENSG00000184216 IRAK1 IRAK|pelle interleukin 1 receptor associated kinase 1 protein-coding chr3-5177 chr3 66626034 66626244 + 7.19 0.000 Intergenic L2b|LINE|L2 112197 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr1-15663 chr1 165541253 165541463 + 7.19 0.000 intron (NR_026744, intron 3 of 6) AluSg|SINE|Alu -2883 NM_001005214 440699 Hs.664975 NM_001005214 ENSG00000162763 LRRC52 - leucine rich repeat containing 52 protein-coding chr14-2994 chr14 52325415 52325625 + 7.19 0.000 intron (NM_000956, intron 1 of 1) intron (NM_000956, intron 1 of 1) 11208 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chr2-12278 chr2 46110983 46111193 + 7.19 0.000 intron (NM_005400, intron 11 of 14) L1MC3|LINE|L1 -186319 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr9-8939 chr9 137349575 137349785 + 7.19 0.000 intron (NM_017820, intron 14 of 21) intron (NM_017820, intron 14 of 21) -47409 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr15-4734 chr15 68328459 68328669 + 7.19 0.000 intron (NM_001004439, intron 15 of 29) intron (NM_001004439, intron 15 of 29) 50819 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr1-7785 chr1 45088274 45088484 + 7.19 0.000 intron (NM_020883, intron 1 of 13) intron (NM_020883, intron 1 of 13) 76125 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr3-9869 chr3 81143823 81144033 + 7.19 0.000 Intergenic L1MA9|LINE|L1 150060 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr8-3980 chr8 52496069 52496279 + 7.19 0.000 Intergenic Intergenic 69256 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr2-14371 chr2 219143499 219143709 + 7.19 0.000 intron (NM_024782, intron 5 of 7) MIR3|SINE|MIR 17261 NM_024782 79840 Hs.225988 NM_024782 ENSG00000187736 NHEJ1 XLF non-homologous end joining factor 1 protein-coding chr12-2975 chr12 111429952 111430162 + 7.19 0.000 intron (NM_005475, intron 2 of 7) intron (NM_005475, intron 2 of 7) -4805 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr7-8148 chr7 28782072 28782282 + 7.19 0.000 intron (NM_001011666, intron 3 of 6) intron (NM_001011666, intron 3 of 6) 96044 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr22-2705 chr22 37797030 37797240 + 7.19 0.000 Intergenic Intergenic -7972 NM_005318 3005 Hs.745024 NM_005318 ENSG00000189060 H1F0 H10|H1FV H1 histone family member 0 protein-coding chr4-4330 chr4 33722928 33723138 + 7.19 0.000 Intergenic Intergenic 316860 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chrX-4043 chrX 18057573 18057783 + 7.19 0.000 intron (NR_133641, intron 1 of 4) MLT1B|LTR|ERVL-MaLR 46966 NR_133641 105373144 NR_133641 ENSG00000225882 LINC01456 - long intergenic non-protein coding RNA 1456 ncRNA chr2-9871 chr2 200480318 200480528 + 7.19 0.000 3' UTR (NM_001282735, exon 13 of 13) 3' UTR (NM_001282735, exon 13 of 13) 29645 NM_001321547 130535 Hs.605775 NM_152387 ENSG00000155729 KCTD18 6530404F10Rik potassium channel tetramerization domain containing 18 protein-coding chr15-2246 chr15 27339344 27339554 + 7.19 0.000 intron (NM_001270873, intron 5 of 5) intron (NM_001270873, intron 5 of 5) -178130 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr1-11626 chr1 239605737 239605947 + 7.19 0.000 intron (NM_001347716, intron 3 of 7) MamRep1151|LTR?|LTR? -23231 NM_000740 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr2-4809 chr2 50139287 50139497 + 7.19 0.000 intron (NM_001330093, intron 18 of 22) intron (NM_001330093, intron 18 of 22) -165189 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr11-7574 chr11 32006831 32007041 + 7.19 0.000 Intergenic Intergenic 34382 NR_120527 100506675 Hs.446169 NR_120526 ENSG00000254584 LOC100506675 - uncharacterized LOC100506675 ncRNA chr12-6603 chr12 125750943 125751153 + 7.19 0.000 Intergenic HAL1|LINE|L1 128596 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr18-2059 chr18 47754814 47755024 + 7.19 0.000 Intergenic Intergenic 175740 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr4-2451 chr4 173252361 173252571 + 7.19 0.000 intron (NM_017423, intron 2 of 11) intron (NM_017423, intron 2 of 11) -15694 NR_036093 100422849 NR_036093 ENSG00000221296 MIR548T - microRNA 548t ncRNA chr8-4016 chr8 58515430 58515640 + 7.19 0.000 Intergenic L1MC2|LINE|L1 -15372 NM_000780 1581 Hs.1644 NM_000780 ENSG00000167910 CYP7A1 CP7A|CYP7|CYPVII cytochrome P450 family 7 subfamily A member 1 protein-coding chr9-7666 chr9 69227994 69228204 + 7.19 0.000 exon (NM_001170415, exon 9 of 22) exon (NM_001170415, exon 9 of 22) 22944 NM_001369875 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr17-3350 chr17 78132138 78132348 + 7.19 0.000 intron (NM_152468, intron 3 of 15) CpG-11726 184 NM_007267 11322 Hs.632227 NM_007267 ENSG00000141524 TMC6 EV1|EVER1|EVIN1|LAK-4P transmembrane channel like 6 protein-coding chrX-4949 chrX 112054831 112055041 + 7.19 0.000 intron (NM_012471, intron 1 of 10) intron (NM_012471, intron 1 of 10) 27840 NM_012471 7224 Hs.657709 NM_012471 ENSG00000072315 TRPC5 PPP1R159|TRP5 transient receptor potential cation channel subfamily C member 5 protein-coding chr16-6376 chr16 52606760 52606970 + 7.19 0.000 non-coding (NR_033920, exon 1 of 4) non-coding (NR_033920, exon 1 of 4) 110 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr1-7835 chr1 70057698 70057908 + 7.19 0.000 intron (NM_001370785, intron 23 of 26) intron (NM_001370785, intron 23 of 26) 138481 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chr2-8119 chr2 79709874 79710084 + 7.19 0.000 intron (NM_001282598, intron 2 of 17) intron (NM_001282598, intron 2 of 17) -60620 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA chr1-11661 chr1 1750025 1750235 + 7.19 0.000 Intergenic Intergenic -4131 NM_182838 9906 Hs.655255 NM_182838 ENSG00000215790 SLC35E2A SLC35E2 solute carrier family 35 member E2A protein-coding chr3-10054 chr3 105502152 105502362 + 7.19 0.000 intron (NM_001243280, intron 1 of 14) intron (NM_001243280, intron 1 of 14) 135348 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr4-7441 chr4 67687863 67688073 + 7.19 0.000 intron (NM_018227, intron 2 of 32) intron (NM_018227, intron 2 of 32) 13187 NM_018227 55236 Hs.212774 NM_018227 ENSG00000033178 UBA6 E1-L2|MOP-4|UBE1L2 ubiquitin like modifier activating enzyme 6 protein-coding chr4-4073 chr4 3551448 3551658 + 7.19 0.000 Intergenic Intergenic -19131 NM_002337 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr16-3261 chr16 88027101 88027311 + 7.19 0.000 intron (NM_001173539, intron 7 of 12) intron (NM_001173539, intron 7 of 12) 57188 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr6-2330 chr6 113813345 113813555 + 7.19 0.000 Intergenic Intergenic -43895 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding chr19-5603 chr19 3053000 3053210 + 7.19 0.000 3' UTR (NM_001130, exon 7 of 7) 3' UTR (NM_001130, exon 7 of 7) -5470 NM_001144761 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr5-6797 chr5 95772081 95772291 + 7.19 0.000 intron (NM_014899, intron 8 of 11) intron (NM_014899, intron 8 of 11) -40084 NM_001349303 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr3-8802 chr3 6290054 6290264 + 7.19 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 515290 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr18-2123 chr18 53873299 53873509 + 7.19 0.000 Intergenic Intergenic -292345 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr1-7512 chr1 154532131 154532341 + 7.19 0.000 intron (NM_182499, intron 6 of 12) LTR12C|LTR|ERV1 -21373 NR_046668 100874097 NR_046668 ENSG00000229780 UBE2Q1-AS1 - UBE2Q1 antisense RNA 1 ncRNA chr4-7703 chr4 89123691 89123901 + 7.19 0.000 Intergenic Intergenic 10979 NM_145715 166815 Hs.58924 NM_145715 ENSG00000180346 TIGD2 HEL106 tigger transposable element derived 2 protein-coding chr2-8922 chr2 183149588 183149798 + 7.19 0.000 intron (NR_109856, intron 4 of 7) intron (NR_109856, intron 4 of 7) 25250 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr8-5218 chr8 117859843 117860053 + 7.19 0.000 intron (NM_000127, intron 1 of 10) AluSx1|SINE|Alu 60965 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr4-7697 chr4 88439518 88439728 + 7.19 0.000 intron (NM_001165136, intron 19 of 21) L2a|LINE|L2 -17496 NM_016323 51191 Hs.26663 NM_016323 ENSG00000138646 HERC5 CEB1|CEBP1 HECT and RLD domain containing E3 ubiquitin protein ligase 5 protein-coding chr20-1539 chr20 51529065 51529275 + 7.19 0.000 intron (NM_001258292, intron 1 of 9) intron (NM_001258292, intron 1 of 9) 13549 NM_012340 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr17-8135 chr17 58470815 58471025 + 7.19 0.000 intron (NM_001080439, intron 2 of 5) AluSg|SINE|Alu 17488 NM_001080439 124535 Hs.380061 NM_001080439 ENSG00000176160 HSF5 HSF 5|HSTF 5 heat shock transcription factor 5 protein-coding chr5-3801 chr5 81141391 81141601 + 7.19 0.000 intron (NM_006909, intron 17 of 26) MIR3|SINE|MIR -91824 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chrX-3638 chrX 96460197 96460407 + 7.19 0.000 Intergenic L2a|LINE|L2 -122400 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr1-11797 chr1 25456155 25456365 + 7.19 0.000 intron (NM_001282564, intron 4 of 8) AluSc|SINE|Alu 25363 NM_018202 55219 Hs.189782 NM_018202 ENSG00000204178 MACO1 MACOILIN|TMEM57 macoilin 1 protein-coding chr17-3434 chr17 18097476 18097686 + 7.19 0.000 intron (NM_001388, intron 2 of 12) MIRc|SINE|MIR 9633 NM_001388 1819 Hs.78582 NM_001388 ENSG00000108591 DRG2 - developmentally regulated GTP binding protein 2 protein-coding chr16-6381 chr16 52867499 52867709 + 7.19 0.000 Intergenic L1PB4|LINE|L1 185269 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr1-16382 chr1 222277079 222277289 + 7.19 0.000 Intergenic Intergenic 270920 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chrX-1039 chrX 97806195 97806405 + 7.19 0.000 Intergenic Intergenic -241765 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr16-6116 chr16 17668803 17669013 + 7.19 0.000 Intergenic Intergenic -197948 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr16-6412 chr16 55489249 55489459 + 7.19 0.000 intron (NM_001127891, intron 6 of 12) intron (NM_001127891, intron 6 of 12) 7797 NM_001127891 4313 Hs.513617 NM_004530 ENSG00000087245 MMP2 CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1 matrix metallopeptidase 2 protein-coding chr2-13496 chr2 149272441 149272651 + 7.19 0.000 Intergenic MER73|LTR|ERVL -57439 NM_001195685 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr5-8310 chr5 116397078 116397288 + 7.19 0.000 Intergenic Intergenic -22613 NR_104675 101927190 Hs.639849 NR_104675 LOC101927190 - uncharacterized LOC101927190 ncRNA chr1-16301 chr1 215422676 215422886 + 7.19 0.000 Intergenic Intergenic -144523 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr4-2599 chr4 126190233 126190443 + 7.19 0.000 Intergenic HERVL-int|LTR|ERVL 683079 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr11-5877 chr11 11186184 11186394 + 7.19 0.000 Intergenic L1ME3A|LINE|L1 166961 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr10-6474 chr10 38203340 38203550 + 7.19 0.000 intron (NR_024524, intron 5 of 6) L1MA3|LINE|L1 27774 NR_024524 100129055 Hs.148265 NR_024524 LOC100129055 - cyclin Y like 1 pseudogene pseudo chr4-4808 chr4 106555985 106556195 + 7.19 0.000 Intergenic L2b|LINE|L2 122466 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA chr22-3430 chr22 39480659 39480869 + 7.19 0.000 intron (NM_002409, intron 1 of 1) intron (NM_002409, intron 1 of 1) -3942 NR_126469 104502417 Hs.586031 NR_126469 ENSG00000227188 MGAT3-AS1 TapSAKI MGAT3 antisense RNA 1 ncRNA chr10-8814 chr10 108582095 108582305 + 7.19 0.000 Intergenic Intergenic -512907 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr1-10037 chr1 89035179 89035389 + 7.19 0.000 Intergenic Intergenic -12418 NM_018284 2635 Hs.720167 NM_018284 ENSG00000117226 GBP3 - guanylate binding protein 3 protein-coding chr1-8732 chr1 235123210 235123420 + 7.19 0.000 intron (NM_014765, intron 1 of 4) AluSg|SINE|Alu 4622 NR_002956 677802 Hs.744743 NR_002956 ENSG00000207181 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA chr16-5198 chr16 12062597 12062807 + 7.19 0.000 intron (NM_032167, intron 9 of 20) intron (NM_032167, intron 9 of 20) 85968 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr1-9050 chr1 12792193 12792403 + 7.19 0.000 intron (NM_023013, intron 1 of 3) AluSq2|SINE|Alu 901 NM_023013 65121 Hs.454859 NM_023013 ENSG00000116721 PRAMEF1 - PRAME family member 1 protein-coding chr12-4045 chr12 49288332 49288542 + 7.19 0.000 Intergenic Intergenic -6710 NM_006262 5630 Hs.37044 NM_006262 ENSG00000135406 PRPH NEF4|PRPH1 peripherin protein-coding chr2-6678 chr2 15766630 15766840 + 7.19 0.000 Intergenic Intergenic 75953 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr12-5075 chr12 93244211 93244421 + 7.19 0.000 intron (NR_040096, intron 2 of 4) Tigger12|DNA|TcMar-Tigger 69950 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr20-1421 chr20 35723265 35723475 + 7.19 0.000 intron (NR_040722, intron 9 of 17) intron (NR_040722, intron 9 of 17) 18890 NR_040722 9584 Hs.282901 NM_004902 ENSG00000131051 RBM39 CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 RNA binding motif protein 39 protein-coding chr2-14255 chr2 213374521 213374731 + 7.19 0.000 intron (NR_047660, intron 7 of 14) intron (NR_047660, intron 7 of 14) 90162 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr17-2114 chr17 8247935 8248145 + 7.19 0.000 promoter-TSS (NM_025099) promoter-TSS (NM_025099) 16 NM_025099 80169 Hs.156055 NM_025099 ENSG00000178971 CTC1 AAF-132|AAF132|C17orf68|CRMCC|tmp494178 CST telomere replication complex component 1 protein-coding chr17-4847 chr17 61873775 61873985 + 7.19 0.000 intron (NM_001351695, intron 19 of 24) intron (NM_001351695, intron 19 of 24) -10321 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding chr9-5252 chr9 78879656 78879866 + 7.19 0.000 Intergenic Intergenic 265905 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr16-5103 chr16 86991917 86992127 + 7.19 0.000 Intergenic MER103C|DNA|hAT-Charlie -65762 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr16-5598 chr16 55362029 55362239 + 7.19 0.000 Intergenic MIRc|SINE|MIR 37575 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr8-3441 chr8 82579546 82579756 + 7.19 0.000 Intergenic L1MA4A|LINE|L1 -332453 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr5-8887 chr5 155294564 155294774 + 7.19 0.000 Intergenic MIR3|SINE|MIR 280914 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr20-1684 chr20 34977797 34978007 + 7.19 0.000 intron (NM_020884, intron 4 of 44) intron (NM_020884, intron 4 of 44) -12474 NR_030223 574501 NR_030223 ENSG00000207635 MIR499A MIR499|MIRN499|hsa-mir-499a|mir-499a microRNA 499a ncRNA chr7-3115 chr7 43234236 43234446 + 7.19 0.000 intron (NM_015052, intron 2 of 29) L2a|LINE|L2 83446 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr2-10099 chr2 55003549 55003759 + 7.19 0.000 intron (NM_153828, intron 1 of 6) MER2|DNA|TcMar-Tigger 6618 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr6-5682 chr6 109624735 109624945 + 7.19 0.000 intron (NM_001145128, intron 12 of 40) HAL1|LINE|L1 66372 NM_001329603 221264 Hs.205144 NM_145025 ENSG00000155085 AK9 AK 9|AKD1|AKD2|C6orf199|C6orf224|dJ70A9.1 adenylate kinase 9 protein-coding chr12-6985 chr12 29829696 29829906 + 7.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR -45042 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr3-4872 chr3 170079061 170079271 + 7.19 0.000 intron (NM_014373, intron 2 of 3) LTR22A|LTR|ERVK 41171 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr2-6606 chr2 236909175 236909385 + 7.19 0.000 Intergenic Intergenic 146887 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr4-8649 chr4 176549485 176549695 + 7.19 0.000 Intergenic L2c|LINE|L2 229624 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr5-7910 chr5 76961917 76962127 + 7.19 0.000 intron (NM_001882, intron 5 of 6) AluSz|SINE|Alu 8977 NM_001882 1393 Hs.115617 NM_001882 ENSG00000145708 CRHBP CRF-BP|CRFBP corticotropin releasing hormone binding protein protein-coding chr11-10465 chr11 117669764 117669974 + 7.19 0.000 intron (NM_020693, intron 3 of 32) L2b|LINE|L2 127347 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr7-5287 chr7 23358292 23358502 + 7.19 0.000 intron (NM_006547, intron 5 of 14) intron (NM_006547, intron 5 of 14) -38049 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA chr3-5051 chr3 38958062 38958272 + 7.19 0.000 intron (NM_001349253, intron 3 of 29) LTR33|LTR|ERVL -7606 NM_014139 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr2-11906 chr2 24304735 24304945 + 7.19 0.000 intron (NM_001348182, intron 8 of 38) intron (NM_001348182, intron 8 of 38) 55696 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr5-3483 chr5 172164899 172165109 + 7.19 0.000 intron (NM_005990, intron 1 of 18) intron (NM_005990, intron 1 of 18) 23220 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr3-10436 chr3 132180599 132180809 + 7.19 0.000 Intergenic Intergenic -136703 NM_001099 55 Hs.433060 NM_001099 ENSG00000014257 ACPP 5'-NT|ACP-3|ACP3 acid phosphatase, prostate protein-coding chr2-10995 chr2 100173938 100174148 + 7.19 0.000 Intergenic Intergenic -31453 NM_002285 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr19-6063 chr19 2669068 2669278 + 7.19 0.000 intron (NM_052847, intron 1 of 4) intron (NM_052847, intron 1 of 4) 33521 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr4-5132 chr4 152500954 152501164 + 7.19 0.000 intron (NM_001349798, intron 2 of 13) MER103C|DNA|hAT-Charlie -11643 NR_036092 100422896 NR_036092 ENSG00000264678 MIR3140 mir-3140 microRNA 3140 ncRNA chr2-7903 chr2 56179525 56179735 + 7.19 0.000 intron (NR_125368, intron 1 of 2) L2c|LINE|L2 -4360 NM_001080433 114800 Hs.117136 NM_001080433 ENSG00000055813 CCDC85A - coiled-coil domain containing 85A protein-coding chr15-1988 chr15 42061714 42061924 + 7.19 0.000 Intergenic L1ME3E|LINE|L1 -11116 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chr11-9983 chr11 78085349 78085559 + 7.19 0.000 Intergenic HERVH-int|LTR|ERV1 -5592 NM_001203262 100532726 Hs.407860 NM_001203260 ENSG00000259112 NDUFC2-KCTD14 - NDUFC2-KCTD14 readthrough protein-coding chr9-3232 chr9 137007970 137008180 + 7.19 0.000 intron (NM_212533, intron 48 of 48) intron (NM_212533, intron 48 of 48) -11507 NM_004669 9022 Hs.64746 NM_004669 ENSG00000169583 CLIC3 - chloride intracellular channel 3 protein-coding chr3-7897 chr3 131895858 131896068 + 7.19 0.000 intron (NM_130808, intron 2 of 15) AluSz|SINE|Alu 89968 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr8-3094 chr8 28453360 28453570 + 7.19 0.000 intron (NM_001258211, intron 4 of 7) intron (NM_001258211, intron 4 of 7) 36764 NM_172366 157574 Hs.741522 NM_172366 ENSG00000214050 FBXO16 FBX16 F-box protein 16 protein-coding chr14-2026 chr14 60486047 60486257 + 7.19 0.000 promoter-TSS (NM_174978) promoter-TSS (NM_174978) -89 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding chr11-10166 chr11 93559729 93559939 + 7.19 0.000 Intergenic Intergenic -16443 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chrX-740 chrX 10007917 10008127 + 7.19 0.000 Intergenic Intergenic -7733 NM_015691 55841 Hs.527524 NM_015691 ENSG00000047644 WWC3 BM042 WWC family member 3 protein-coding chr2-7449 chr2 12543944 12544154 + 7.19 0.000 intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) -172823 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chrX-3751 chrX 126093433 126093643 + 7.19 0.000 Intergenic Intergenic -16224 NR_110409 101928495 Hs.545998 NR_110409 ENSG00000237208 LOC101928495 - uncharacterized LOC101928495 ncRNA chr17-6164 chr17 82088512 82088722 + 7.19 0.000 intron (NM_004104, intron 15 of 42) intron (NM_004104, intron 15 of 42) 1523 NR_132755 106633803 NR_132755 SNORD134 ZL12 small nucleolar RNA, C/D box 134 snoRNA chr9-4456 chr9 22682958 22683168 + 7.19 0.000 intron (NR_038977, intron 3 of 5) intron (NR_038977, intron 3 of 5) 36863 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr10-3491 chr10 68749538 68749748 + 7.19 0.000 exon (NM_001282960, exon 9 of 24) exon (NM_001282960, exon 9 of 24) -5529 NR_003076 692211 NR_003076 ENSG00000283551 SNORD98 HBII-419 small nucleolar RNA, C/D box 98 snoRNA chr1-5482 chr1 115338131 115338341 + 7.19 0.000 promoter-TSS (NM_002506) promoter-TSS (NM_002506) 0 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr2-13266 chr2 127365110 127365320 + 7.19 0.000 Intergenic MIRb|SINE|MIR -21986 NM_006609 10746 Hs.145605 NM_006609 ENSG00000169967 MAP3K2 MEKK2|MEKK2B mitogen-activated protein kinase kinase kinase 2 protein-coding chr15-2029 chr15 50373764 50373974 + 7.19 0.000 Intergenic Intergenic 13540 NR_039862 100616396 NR_039862 ENSG00000284284 MIR4712 - microRNA 4712 ncRNA chr17-2078 chr17 78465663 78465873 + 7.19 0.000 intron (NM_173628, intron 56 of 80) SVA_C|Retroposon|SVA -19142 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr1-15927 chr1 186450728 186450938 + 7.19 0.000 intron (NM_002597, intron 1 of 3) intron (NM_002597, intron 1 of 3) -2109 NM_022576 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding chr1-8295 chr1 43294414 43294624 + 7.19 0.000 Intergenic Intergenic -6463 NM_001253357 7075 Hs.78824 NM_005424 ENSG00000066056 TIE1 JTK14|TIE tyrosine kinase with immunoglobulin like and EGF like domains 1 protein-coding chr8-6742 chr8 88865334 88865544 + 7.19 0.000 Intergenic L1M2|LINE|L1 -537956 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr5-7115 chr5 264733 264943 + 7.19 0.000 Intergenic L1MC5a|LINE|L1 6686 NR_104613 102467073 Hs.368328 NR_104613 HRAT5 - heart tissue-associated transcript 5 ncRNA chr8-4967 chr8 124434457 124434667 + 7.19 0.000 Intergenic Intergenic -16258 NM_017956 55039 Hs.9925 NM_017956 ENSG00000183665 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog protein-coding chr17-3994 chr17 68053594 68053804 + 7.19 0.000 Intergenic Intergenic 17739 NM_001320611 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr2-11346 chr2 203498213 203498423 + 7.19 0.000 intron (NM_001329728, intron 1 of 15) intron (NM_001329728, intron 1 of 15) 36983 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr8-6790 chr8 95055845 95056055 + 7.19 0.000 intron (NR_148915, intron 9 of 9) L1ME3F|LINE|L1 -16964 NR_036105 100422964 NR_036105 ENSG00000283522 MIR3150A MIR3150|mir-3150a microRNA 3150a ncRNA chr20-1120 chr20 25199849 25200059 + 7.19 0.000 intron (NM_001322390, intron 2 of 14) L1MB3|LINE|L1 -3062 NR_109994 101926889 Hs.585997 NR_109994 LOC101926889 - uncharacterized LOC101926889 ncRNA chr1-8612 chr1 192439442 192439652 + 7.19 0.000 Intergenic LTR88b|LTR|Gypsy? 122555 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr4-5168 chr4 156968637 156968847 + 7.19 0.000 intron (NR_036641, intron 1 of 6) intron (NR_036641, intron 1 of 6) 3057 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chrX-2788 chrX 132466360 132466570 + 7.19 0.000 intron (NM_001170704, intron 1 of 8) intron (NM_001170704, intron 1 of 8) 23570 NM_001170704 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr14-4807 chr14 67405613 67405823 + 7.19 0.000 intron (NM_016445, intron 1 of 8) MLT1F|LTR|ERVL-MaLR 6447 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr2-4766 chr2 26476745 26476955 + 7.19 0.000 intron (NM_194322, intron 4 of 28) intron (NM_194322, intron 4 of 28) 1274 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chrX-4439 chrX 54922585 54922795 + 7.19 0.000 exon (NM_016157, exon 3 of 13) exon (NM_016157, exon 3 of 13) 1866 NM_016157 7216 Hs.633653 NM_016157 ENSG00000067445 TRO MAGE-d3|MAGED3 trophinin protein-coding chr2-4869 chr2 107116758 107116968 + 7.19 0.000 Intergenic Intergenic -229754 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr10-7634 chr10 23977868 23978078 + 7.19 0.000 intron (NM_001098500, intron 1 of 18) intron (NM_001098500, intron 1 of 18) -230818 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr18-594 chr18 49017116 49017326 + 7.19 0.000 Intergenic Intergenic -6482 NR_148999 100129878 Hs.437704 NR_148999 ENSG00000264269 LOC100129878 - uncharacterized LOC100129878 ncRNA chr20-4246 chr20 48616557 48616767 + 7.19 0.000 Intergenic Intergenic 211337 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr4-8765 chr4 187444152 187444362 + 7.19 0.000 intron (NR_038931, intron 1 of 4) intron (NR_038931, intron 1 of 4) 61356 NR_038931 339975 Hs.639361 NR_038931 LOC339975 - uncharacterized LOC339975 ncRNA chr5-2788 chr5 178065930 178066140 + 7.19 0.000 Intergenic AluJr|SINE|Alu -47497 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr3-10457 chr3 133464542 133464752 + 7.19 0.000 intron (NR_135276, intron 1 of 4) intron (NR_135276, intron 1 of 4) -8871 NR_135278 85003 Hs.659202 NR_135276 ENSG00000249993 BFSP2-AS1 - BFSP2 antisense RNA 1 ncRNA chr10-4652 chr10 125245676 125245886 + 7.19 0.000 Intergenic L1MC1|LINE|L1 -84751 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr2-5771 chr2 223222561 223222771 + 7.19 0.000 Intergenic Intergenic 170736 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr17-7767 chr17 35587249 35587459 + 7.19 0.000 promoter-TSS (NM_001282) promoter-TSS (NM_001282) 32 NM_001282 163 Hs.514819 NM_001282 ENSG00000006125 AP2B1 ADTB2|AP105B|AP2-BETA|CLAPB1 adaptor related protein complex 2 subunit beta 1 protein-coding chr3-4579 chr3 182690672 182690882 + 7.19 0.000 Intergenic L1MEg|LINE|L1 -102727 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr1-7669 chr1 15924623 15924833 + 7.19 0.000 intron (NM_015001, intron 10 of 14) AluSp|SINE|Alu 51404 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr4-8427 chr4 153533406 153533616 + 7.19 0.000 intron (NM_001131007, intron 3 of 34) intron (NM_001131007, intron 3 of 34) 67151 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr2-7062 chr2 165440307 165440517 + 7.19 0.000 Intergenic Intergenic -29286 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr11-6557 chr11 70906884 70907094 + 7.19 0.000 intron (NM_012309, intron 9 of 24) intron (NM_012309, intron 9 of 24) -34621 NR_037437 100500844 NR_037437 ENSG00000263744 MIR3664 mir-3664 microRNA 3664 ncRNA chr19-3796 chr19 4184045 4184255 + 7.19 0.000 intron (NM_133475, intron 1 of 21) intron (NM_133475, intron 1 of 21) 796 NM_133475 170961 Hs.197872 NM_133475 ENSG00000089847 ANKRD24 - ankyrin repeat domain 24 protein-coding chr7-5751 chr7 74554818 74555028 + 7.19 0.000 intron (NM_016328, intron 17 of 26) intron (NM_016328, intron 17 of 26) -41045 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr7-9747 chr7 158680299 158680509 + 7.19 0.000 intron (NM_001281932, intron 11 of 28) intron (NM_001281932, intron 11 of 28) 24400 NM_017760 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr1-10900 chr1 207418907 207419117 + 7.19 0.000 Intergenic L1MEc|LINE|L1 -35288 NM_001006658 1380 Hs.445757 NM_001877 ENSG00000117322 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement C3d receptor 2 protein-coding chr7-5699 chr7 69829577 69829787 + 7.19 0.000 intron (NM_015570, intron 1 of 18) L1PA8|LINE|L1 231207 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr13-1779 chr13 113915537 113915747 + 7.19 0.000 intron (NM_001278674, intron 3 of 7) intron (NM_001278674, intron 3 of 7) 13349 NR_047495 100861555 Hs.353773 NR_047495 ENSG00000260910 LINC00565 - long intergenic non-protein coding RNA 565 ncRNA chr10-8982 chr10 119795105 119795315 + 7.19 0.000 intron (NM_014937, intron 6 of 19) SVA_D|Retroposon|SVA -24047 NM_001243194 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr10-7271 chr10 128463964 128464174 + 7.19 0.000 Intergenic Intergenic 178119 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr19-2332 chr19 41785612 41785822 + 7.19 0.000 Intergenic Intergenic -10870 NM_001815 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr17-4461 chr17 56227497 56227707 + 7.19 0.000 intron (NM_001370326, intron 2 of 20) intron (NM_001370326, intron 2 of 20) 74127 NM_001365758 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chrX-3220 chrX 53318666 53318876 + 7.19 0.000 intron (NM_001111125, intron 1 of 14) L3|LINE|CR1 2579 NM_001111125 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr1-5820 chr1 221163908 221164118 + 7.19 0.000 Intergenic Intergenic 172283 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr3-10599 chr3 143710061 143710271 + 7.19 0.000 intron (NM_173653, intron 4 of 15) (ATACAC)n|Simple_repeat|Simple_repeat 138302 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr2-6248 chr2 39591223 39591433 + 7.19 0.000 intron (NR_037875, intron 5 of 5) L1MB7|LINE|L1 -74170 NM_001167959 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr3-3592 chr3 62456822 62457032 + 7.19 0.000 intron (NM_003716, intron 26 of 29) MER63A|DNA|hAT-Blackjack -83377 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr16-6767 chr16 76769391 76769601 + 7.19 0.000 Intergenic Intergenic -99440 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr3-10450 chr3 132945096 132945306 + 7.19 0.000 Intergenic Intergenic -93087 NM_023943 66000 Hs.191616 NM_023943 ENSG00000144868 TMEM108 CT124|RTLN transmembrane protein 108 protein-coding chr1-14227 chr1 36068687 36068897 + 7.19 0.000 3' UTR (NM_024852, exon 19 of 19) 3' UTR (NM_024852, exon 19 of 19) -15302 NM_014466 27285 Hs.127111 NM_014466 ENSG00000092850 TEKT2 TEKTB1|TEKTIN-T|h-tektin-t tektin 2 protein-coding chr14-3453 chr14 100522613 100522823 + 7.19 0.000 intron (NM_001350950, intron 3 of 5) MIR|SINE|MIR 45352 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr9-7503 chr9 32202250 32202460 + 7.19 0.000 Intergenic Intergenic -182248 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr7-5620 chr7 53008420 53008630 + 7.19 0.000 Intergenic MER52A|LTR|ERV1 -27108 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr17-7413 chr17 9487358 9487568 + 7.19 0.000 intron (NM_004853, intron 6 of 7) intron (NM_004853, intron 6 of 7) 88357 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr20-4225 chr20 47886643 47886853 + 7.19 0.000 Intergenic Intergenic -96478 NR_109942 101060004 Hs.129970 NR_109942 LINC01523 - long intergenic non-protein coding RNA 1523 ncRNA chr3-6203 chr3 61805402 61805612 + 7.19 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 243936 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr7-3778 chr7 83876776 83876986 + 7.19 0.000 Intergenic Intergenic -227742 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr14-5147 chr14 90945707 90945917 + 7.19 0.000 intron (NM_182398, intron 4 of 12) AluJb|SINE|Alu 114312 NM_001322237 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr13-1938 chr13 94236805 94237015 + 7.19 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) -48919 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr4-2420 chr4 113635893 113636103 + 7.19 0.000 intron (NM_001221, intron 3 of 18) L2a|LINE|L2 125740 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr5-8094 chr5 96155298 96155508 + 7.19 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 76265 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr15-2996 chr15 54373151 54373361 + 7.19 0.000 intron (NM_001329919, intron 16 of 31) MER52A|LTR|ERV1 360608 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr1-15175 chr1 108924738 108924948 + 7.19 0.000 intron (NM_013296, intron 14 of 14) L2a|LINE|L2 25605 NM_001278202 23155 Hs.658489 NM_015127 ENSG00000121940 CLCC1 MCLC chloride channel CLIC like 1 protein-coding chr15-4519 chr15 53506586 53506796 + 7.19 0.000 Intergenic Intergenic 34161 NR_102336 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr16-4029 chr16 1008883 1009093 + 7.19 0.000 Intergenic Intergenic 27218 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr13-2809 chr13 102439918 102440128 + 7.19 0.000 Intergenic L1ME3B|LINE|L1 -37580 NM_001321948 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr3-11152 chr3 189186101 189186311 + 7.19 0.000 intron (NM_198485, intron 1 of 5) intron (NM_198485, intron 1 of 5) 14235 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr2-4094 chr2 142516301 142516511 + 7.19 0.000 Intergenic MER47B|DNA|TcMar-Tigger -361258 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr2-5559 chr2 166898198 166898408 + 7.19 0.000 intron (NM_152381, intron 1 of 10) LTR41B|LTR|ERVL 9816 NM_001199143 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr6-5602 chr6 39929109 39929319 + 7.19 0.000 intron (NM_001358530, intron 1 of 10) intron (NM_001358530, intron 1 of 10) -1498 NM_005943 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr13-2429 chr13 45847330 45847540 + 7.19 0.000 intron (NM_198849, intron 1 of 1) intron (NM_198849, intron 1 of 1) 4318 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr10-5777 chr10 104340804 104341014 + 7.19 0.000 Intergenic L1MEd|LINE|L1 -2444 NM_001272013 85450 Hs.523252 NM_033397 ENSG00000148841 ITPRIP DANGER|KIAA1754|bA127L20|bA127L20.2 inositol 1,4,5-trisphosphate receptor interacting protein protein-coding chr16-6506 chr16 59953101 59953311 + 7.19 0.000 intron (NR_110917, intron 1 of 3) intron (NR_110917, intron 1 of 3) 97853 NR_110917 101927580 Hs.552235 NR_110917 ENSG00000261807 LINC02141 - long intergenic non-protein coding RNA 2141 ncRNA chr17-7960 chr17 47816390 47816600 + 7.19 0.000 intron (NM_145798, intron 10 of 22) intron (NM_145798, intron 10 of 22) 5299 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding chrX-4283 chrX 42119149 42119359 + 7.19 0.000 Intergenic Intergenic -195700 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr1-8957 chr1 9210839 9211049 + 7.19 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -23830 NM_004285 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr19-5112 chr19 57047961 57048171 + 7.19 0.000 Intergenic L2a|LINE|L2 -72075 NM_020903 57663 Hs.515632 NM_020903 ENSG00000131864 USP29 HOM-TES-84/86 ubiquitin specific peptidase 29 protein-coding chr10-5158 chr10 55366722 55366932 + 7.19 0.000 intron (NM_001354404, intron 2 of 34) intron (NM_001354404, intron 2 of 34) -232215 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding chrX-4572 chrX 70623828 70624038 + 7.19 0.000 intron (NM_001003811, intron 21 of 30) intron (NM_001003811, intron 21 of 30) -167939 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr12-7817 chr12 99389078 99389288 + 7.19 0.000 intron (NM_152788, intron 12 of 25) intron (NM_152788, intron 12 of 25) -234093 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr19-2851 chr19 4182431 4182641 + 7.19 0.000 promoter-TSS (NM_133475) promoter-TSS (NM_133475) 27 NM_001321063 51548 Hs.423756 NM_016539 ENSG00000077463 SIRT6 SIR2L6 sirtuin 6 protein-coding chr13-2513 chr13 59305650 59305860 + 7.19 0.000 Intergenic Intergenic -706963 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr6-6262 chr6 34535172 34535382 + 7.19 0.000 TTS (NM_020804) TTS (NM_020804) 20405 NM_001199583 29993 Hs.520087 NM_020804 ENSG00000124507 PACSIN1 SDPI protein kinase C and casein kinase substrate in neurons 1 protein-coding chr3-10116 chr3 112896565 112896775 + 7.19 0.000 Intergenic Intergenic -50720 NM_001008784 344807 Hs.531814 NM_001008784 ENSG00000206531 CD200R1L CD200R2|CD200RLa CD200 receptor 1 like protein-coding chr21-1487 chr21 38641616 38641826 + 7.19 0.000 intron (NM_001243432, intron 1 of 11) intron (NM_001243432, intron 1 of 11) 18946 NM_001243428 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr2-13006 chr2 106856215 106856425 + 7.19 0.000 intron (NM_032528, intron 1 of 5) LTR79|LTR|ERVL 29708 NR_136313 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr7-8863 chr7 89944932 89945142 + 7.19 0.000 intron (NR_110029, intron 2 of 2) intron (NR_110029, intron 2 of 2) -174363 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr2-13292 chr2 129208410 129208620 + 7.19 0.000 Intergenic L1MEg|LINE|L1 65376 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr2-10838 chr2 57444573 57444783 + 7.19 0.000 Intergenic ERVL-B4-int|LTR|ERVL -462973 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr11-9656 chr11 66929230 66929440 + 7.19 0.000 intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) 5171 NR_036121 100423029 NR_036121 ENSG00000266423 MIR3163 - microRNA 3163 ncRNA chr2-14120 chr2 201881297 201881507 + 7.19 0.000 intron (NM_001261435, intron 12 of 13) intron (NM_001261435, intron 12 of 13) 74823 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr8-4566 chr8 127290053 127290263 + 7.19 0.000 intron (NR_117100, intron 5 of 5) MLT1G1|LTR|ERVL-MaLR 45521 NR_117099 103021164 Hs.571531 NR_117099 CASC21 CARLO2|CARLo-2|LINC01244 cancer susceptibility 21 ncRNA chr3-5548 chr3 3230995 3231205 + 7.19 0.000 Intergenic LTR47A|LTR|ERVL -51383 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr4-8018 chr4 117623561 117623771 + 7.19 0.000 intron (NR_125757, intron 2 of 3) LTR26|LTR|ERV1 195268 NR_125757 103689918 Hs.582062 NR_125757 LINC01378 - long intergenic non-protein coding RNA 1378 ncRNA chr20-2929 chr20 1022754 1022964 + 7.19 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -20548 NM_001040007 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding chr10-6404 chr10 7618141 7618351 + 7.19 0.000 intron (NM_001001851, intron 5 of 11) AluJo|SINE|Alu 1427 NM_032817 80760 Hs.498586 NM_030569 ENSG00000123243 ITIH5 ITI-HC5|PP14776 inter-alpha-trypsin inhibitor heavy chain 5 protein-coding chr14-2172 chr14 92730025 92730235 + 7.19 0.000 intron (NM_001363699, intron 3 of 12) intron (NM_001363699, intron 3 of 12) 18497 NM_005606 5641 Hs.18069 NM_005606 ENSG00000100600 LGMN AEP|LGMN1|PRSC1 legumain protein-coding chr11-4866 chr11 34303438 34303648 + 7.19 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 54467 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr12-7285 chr12 52945349 52945559 + 7.19 0.000 intron (NM_001256293, intron 1 of 8) intron (NM_001256293, intron 1 of 8) -3417 NM_199187 3875 Hs.406013 NM_000224 ENSG00000111057 KRT18 CK-18|CYK18|K18 keratin 18 protein-coding chr17-7122 chr17 75913640 75913850 + 7.19 0.000 exon (NM_001319193, exon 27 of 29) exon (NM_001319193, exon 27 of 29) -8645 NM_032478 64978 Hs.442609 NM_032478 ENSG00000204316 MRPL38 HSPC262|L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding chr3-5187 chr3 69411317 69411527 + 7.19 0.000 Intergenic Intergenic -25334 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr18-2588 chr18 13232632 13232842 + 7.19 0.000 intron (NM_181482, intron 1 of 5) intron (NM_181482, intron 1 of 5) -6806 NR_146617 147276 Hs.675872 NR_146617 ENSG00000279020 C18orf15 HsT3231 chromosome 18 open reading frame 15 (putative) ncRNA chr11-8393 chr11 93956866 93957076 + 7.19 0.000 Intergenic Intergenic -64383 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chr2-3407 chr2 45652562 45652772 + 7.19 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 992 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr5-4568 chr5 22905530 22905740 + 7.19 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -52291 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr9-3972 chr9 137182958 137183168 + 7.19 0.000 intron (NM_013366, intron 6 of 12) intron (NM_013366, intron 6 of 12) 5497 NM_013366 29882 Hs.533262 NM_013366 ENSG00000176248 ANAPC2 APC2 anaphase promoting complex subunit 2 protein-coding chr16-6871 chr16 84072019 84072229 + 7.19 0.000 intron (NM_003791, intron 12 of 22) L1MB7|LINE|L1 -29967 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chrX-4883 chrX 106728452 106728662 + 7.19 0.000 intron (NM_194463, intron 1 of 6) intron (NM_194463, intron 1 of 6) 1856 NM_194463 79589 Hs.496542 NM_024539 ENSG00000133135 RNF128 GRAIL ring finger protein 128 protein-coding chr19-5105 chr19 55976951 55977161 + 7.19 0.000 intron (NM_001317000, intron 8 of 9) AluY|SINE|Alu -22670 NM_153447 126206 Hs.356872 NM_153447 ENSG00000171487 NLRP5 CLR19.8|MATER|NALP5|PAN11|PYPAF8 NLR family pyrin domain containing 5 protein-coding chr8-6327 chr8 49181575 49181785 + 7.19 0.000 Intergenic L1MC3|LINE|L1 109336 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr18-1905 chr18 32102346 32102556 + 7.19 0.000 intron (NM_198128, intron 1 of 4) AluY|SINE|Alu 9845 NM_198128 51444 Hs.302408 NM_016271 ENSG00000134758 RNF138 HSD-4|NARF|STRIN|hNARF ring finger protein 138 protein-coding chr11-9838 chr11 72557591 72557801 + 7.19 0.000 Intergenic Intergenic -12960 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr18-3465 chr18 69365281 69365491 + 7.19 0.000 Intergenic Intergenic -35502 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr11-8332 chr11 76792063 76792273 + 7.19 0.000 5' UTR (NM_001318477, exon 1 of 2) 5' UTR (NM_001318477, exon 1 of 2) 416 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr22-1031 chr22 35540286 35540496 + 7.19 0.000 promoter-TSS (NM_001366725) promoter-TSS (NM_001366725) -103 NM_001366725 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr7-7328 chr7 47266414 47266624 + 7.19 0.000 Intergenic Intergenic 198284 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr16-6540 chr16 63886035 63886245 + 7.19 0.000 Intergenic Intergenic 1235923 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-11856 chr1 36572616 36572826 + 7.19 0.000 Intergenic Intergenic -89407 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr10-7820 chr10 43283128 43283338 + 7.19 0.000 Intergenic Intergenic -16168 NM_145313 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr3-7708 chr3 48574492 48574702 + 7.19 0.000 intron (NM_000094, intron 77 of 117) intron (NM_000094, intron 77 of 117) 4380 NR_031756 100313843 NR_031756 ENSG00000284251 MIR711 hsa-mir-711 microRNA 711 ncRNA chr3-5835 chr3 31980570 31980780 + 7.19 0.000 intron (NM_001174060, intron 1 of 10) CpG -1075 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr7-9391 chr7 131081843 131082053 + 7.19 0.000 intron (NR_109850, intron 2 of 5) intron (NR_109850, intron 2 of 5) 25082 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr3-11085 chr3 185038861 185039071 + 7.19 0.000 intron (NM_001009921, intron 45 of 46) L1PA15|LINE|L1 114094 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr7-7316 chr7 44775864 44776074 + 7.19 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 19781 NM_174929 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr6-6464 chr6 108528502 108528712 + 7.19 0.000 Intergenic Intergenic -31218 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr9-6707 chr9 1389605 1389815 + 7.19 0.000 Intergenic L1PA15|LINE|L1 338223 NR_163472 10655 Hs.59506 NM_006557 ENSG00000173253 DMRT2 - doublesex and mab-3 related transcription factor 2 protein-coding chr1-9339 chr1 28456521 28456731 + 7.19 0.000 intron (NM_023923, intron 1 of 12) AluJb|SINE|Alu 18476 NM_023923 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr6-4227 chr6 5058267 5058477 + 7.19 0.000 intron (NR_126015, intron 2 of 3) intron (NR_126015, intron 2 of 3) -27114 NM_001145115 648791 Hs.653089 NM_001145115 ENSG00000219607 PPP1R3G - protein phosphatase 1 regulatory subunit 3G protein-coding chr4-8605 chr4 171086570 171086780 + 7.19 0.000 Intergenic AluJr|SINE|Alu 46073 NR_038838 100506122 Hs.434205 NR_038838 ENSG00000248872 LINC02431 - long intergenic non-protein coding RNA 2431 ncRNA chr1-13065 chr1 177228656 177228866 + 7.19 0.000 intron (NM_021165, intron 1 of 7) intron (NM_021165, intron 1 of 7) 57803 NM_021165 57795 Hs.495918 NM_021165 ENSG00000198797 BRINP2 DBCCR1L2|FAM5B BMP/retinoic acid inducible neural specific 2 protein-coding chr2-14275 chr2 215407458 215407668 + 7.19 0.000 intron (NM_212482, intron 17 of 45) intron (NM_212482, intron 17 of 45) 28505 NM_001365519 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr5-7372 chr5 20121576 20121786 + 7.19 0.000 intron (NM_001291956, intron 2 of 14) intron (NM_001291956, intron 2 of 14) -133481 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr2-9652 chr2 25144281 25144491 + 7.19 0.000 intron (NM_014971, intron 18 of 22) AluSx1|SINE|Alu 24194 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr9-7963 chr9 91853839 91854049 + 7.19 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 96284 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr7-6530 chr7 38306194 38306404 + 7.19 0.000 Intergenic Intergenic -32652 NM_001003799 445347 Hs.534032 NM_001003799 TARP CD3G|TCRG|TCRGC1|TCRGC2|TCRGV TCR gamma alternate reading frame protein protein-coding chr2-11817 chr2 17510159 17510369 + 7.19 0.000 TTS (NM_001321233) TTS (NM_001321233) 8176 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr2-12569 chr2 69601825 69602035 + 7.19 0.000 intron (NM_014911, intron 2 of 21) L1MC4|LINE|L1 41809 NM_014911 22848 Hs.468878 NM_014911 ENSG00000115977 AAK1 - AP2 associated kinase 1 protein-coding chr10-3797 chr10 131577753 131577963 + 7.19 0.000 Intergenic Intergenic 212341 NR_038365 399827 Hs.523353 NM_001001677 ENSG00000189275 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA chr6-8125 chr6 128576718 128576928 + 7.19 0.000 Intergenic MER5A|DNA|hAT-Charlie -56224 NM_001291982 5796 Hs.155919 NM_002844 ENSG00000152894 PTPRK R-PTP-kappa protein tyrosine phosphatase receptor type K protein-coding chrX-3158 chrX 22721786 22721996 + 7.19 0.000 intron (NR_073010, intron 4 of 11) L1PA16|LINE|L1 -278069 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr14-5005 chr14 77139499 77139709 + 7.19 0.000 exon (NM_001364172, exon 2 of 3) exon (NM_001364172, exon 2 of 3) 1140 NM_001364172 283576 Hs.525485 NM_174976 ENSG00000177108 ZDHHC22 C14orf59 zinc finger DHHC-type containing 22 protein-coding chr1-11462 chr1 90580443 90580653 + 7.19 0.000 Intergenic Intergenic -77202 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr1-12732 chr1 58840254 58840464 + 7.19 0.000 intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 55208 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr8-2627 chr8 66176981 66177191 + 7.19 0.000 exon (NM_000756, exon 2 of 2) exon (NM_000756, exon 2 of 2) 1378 NM_000756 1392 Hs.75294 NM_000756 ENSG00000147571 CRH CRF|CRH1 corticotropin releasing hormone protein-coding chr10-8265 chr10 75785567 75785777 + 7.19 0.000 intron (NM_032024, intron 1 of 5) intron (NM_032024, intron 1 of 5) 2911 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr2-5664 chr2 199928786 199928996 + 7.19 0.000 TTS (NR_109906) TTS (NR_109906) 17598 NM_153689 205327 Hs.154494 NM_153689 ENSG00000178074 C2orf69 - chromosome 2 open reading frame 69 protein-coding chr5-5108 chr5 100512419 100512629 + 7.19 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -22850 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr1-15976 chr1 193899215 193899425 + 7.19 0.000 Intergenic L2c|LINE|L2 594575 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr16-5665 chr16 69084026 69084236 + 7.19 0.000 3' UTR (NM_024562, exon 18 of 18) 3' UTR (NM_024562, exon 18 of 18) -21522 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr4-8445 chr4 154847546 154847756 + 7.19 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 66146 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr2-12179 chr2 40504099 40504309 + 7.19 0.000 intron (NM_001112802, intron 1 of 7) L1MA1|LINE|L1 8231 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr7-9466 chr7 134957023 134957233 + 7.19 0.000 intron (NM_033139, intron 7 of 12) intron (NM_033139, intron 7 of 12) -29380 NM_001345853 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr22-1834 chr22 37478471 37478681 + 7.19 0.000 intron (NR_029413, intron 3 of 6) MamRep38|DNA|hAT 7808 NM_002405 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr5-6776 chr5 89070792 89071002 + 7.19 0.000 intron (NR_136221, intron 3 of 6) L1PA10|LINE|L1 -166792 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr12-7079 chr12 42981495 42981705 + 7.19 0.000 Intergenic Intergenic -173715 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr15-2594 chr15 62471406 62471616 + 7.19 0.000 Intergenic Intergenic 128482 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr7-8055 chr7 22508904 22509114 + 7.19 0.000 Intergenic Intergenic -8727 NM_207342 256227 Hs.729825 NM_207342 ENSG00000105889 STEAP1B - STEAP family member 1B protein-coding chr4-5968 chr4 173581422 173581632 + 7.19 0.000 intron (NR_136196, intron 3 of 4) intron (NR_136196, intron 3 of 4) 51069 NR_003679 79804 Hs.61435 NR_003679 ENSG00000237125 HAND2-AS1 DEIN|NBLA00301|UPH HAND2 antisense RNA 1 ncRNA chr2-10415 chr2 192608303 192608513 + 7.19 0.000 Intergenic Intergenic -141437 NR_002769 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr2-11122 chr2 133986473 133986683 + 7.19 0.000 Intergenic Intergenic -133357 NM_001371457 chr7-7638 chr7 139540828 139541038 + 7.19 0.000 intron (NM_001080511, intron 3 of 4) AluJo|SINE|Alu 17248 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr5-5242 chr5 119008031 119008241 + 7.19 0.000 intron (NR_134249, intron 3 of 8) MLT1A|LTR|ERVL-MaLR -19589 NM_173666 285605 Hs.655891 NM_173666 ENSG00000169570 DTWD2 - DTW domain containing 2 protein-coding chr17-7459 chr17 14482031 14482241 + 7.19 0.000 Intergenic Intergenic 178396 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr8-4875 chr8 63359553 63359763 + 7.19 0.000 Intergenic Intergenic -106191 NR_125825 102724612 Hs.97639 NR_125825 ENSG00000253894 LOC102724612 - uncharacterized LOC102724612 ncRNA chr13-3688 chr13 35988637 35988847 + 7.19 0.000 intron (NM_001330071, intron 3 of 16) intron (NM_001330071, intron 3 of 16) -132881 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr2-11644 chr2 6317898 6318108 + 7.19 0.000 Intergenic L1PA6|LINE|L1 57419 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr7-5345 chr7 29304652 29304862 + 7.19 0.000 intron (NM_001293070, intron 2 of 13) LTR78|LTR|ERV1 -95787 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr3-5363 chr3 146132076 146132286 + 7.19 0.000 intron (NM_182943, intron 1 of 19) MER81|DNA|hAT-Blackjack 29003 NM_182943 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr5-3915 chr5 170752523 170752733 + 7.19 0.000 Intergenic Intergenic -31091 NM_001291985 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr2-14003 chr2 191026697 191026907 + 7.19 0.000 intron (NR_136318, intron 1 of 2) MSTB1-int|LTR|ERVL-MaLR 5276 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr3-4813 chr3 130727291 130727501 + 7.19 0.000 intron (NM_014602, intron 6 of 19) AluYk4|SINE|Alu 19433 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr12-4821 chr12 56996357 56996567 + 7.19 0.000 3' UTR (NM_007264, exon 2 of 2) 3' UTR (NM_007264, exon 2 of 2) 1970 NM_007264 11318 Hs.483909 NM_007264 ENSG00000166856 GPR182 7TMR|ADMR|AM-R|AMR|G10D|L1-R|gamrh|hrhAMR G protein-coupled receptor 182 protein-coding chr2-9638 chr2 17794576 17794786 + 7.19 0.000 Intergenic Intergenic -21779 NM_001105569 343930 NM_001105569 ENSG00000151379 MSGN1 MSOG|pMsgn1 mesogenin 1 protein-coding chr22-2847 chr22 44537566 44537776 + 7.19 0.000 Intergenic Intergenic -31669 NR_028411 388910 Hs.332685 NM_001012986 ENSG00000187012 LINC00207 NCRNA00207 long intergenic non-protein coding RNA 207 ncRNA chr4-7148 chr4 38453215 38453425 + 7.19 0.000 non-coding (NR_110951, exon 3 of 8) non-coding (NR_110951, exon 3 of 8) -56447 NR_149076 106144599 Hs.582017 NR_149076 ENSG00000249667 LINC01259 TCONS_00007515 long intergenic non-protein coding RNA 1259 ncRNA chr1-5543 chr1 222589904 222590114 + 7.19 0.000 promoter-TSS (NM_005681) promoter-TSS (NM_005681) 50 NR_110614 100506161 Hs.553851 NR_110613 ENSG00000225265 TAF1A-AS1 - TAF1A antisense RNA 1 ncRNA chr18-2899 chr18 11618172 11618382 + 7.19 0.000 Intergenic Intergenic 8719 NM_001282300 646000 NM_001282300 ENSG00000236396 SLC35G4 AMAC1L1|SLC35G4P solute carrier family 35 member G4 protein-coding chr6-8444 chr6 153108346 153108556 + 7.19 0.000 intron (NM_012419, intron 1 of 4) intron (NM_012419, intron 1 of 4) 22831 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr4-3618 chr4 8420401 8420611 + 7.19 0.000 intron (NM_003501, intron 1 of 17) LTR17|LTR|ERV1 20217 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr3-2466 chr3 115784146 115784356 + 7.19 0.000 Intergenic CpG 120875 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr3-6105 chr3 53067579 53067789 + 7.19 0.000 Intergenic Intergenic -21611 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr8-3366 chr8 48141198 48141408 + 7.19 0.000 Intergenic L2|LINE|L2 132872 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr17-6581 chr17 49016832 49017042 + 7.19 0.000 intron (NM_001160423, intron 2 of 12) intron (NM_001160423, intron 2 of 12) 19552 NM_001160423 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chr10-7674 chr10 28432170 28432380 + 7.19 0.000 TTS (NR_134496) TTS (NR_134496) 63538 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chr10-5351 chr10 72086179 72086389 + 7.19 0.000 TTS (NM_001134434) TTS (NM_001134434) 2267 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr3-10869 chr3 169183193 169183403 + 7.19 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -35827 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr2-5996 chr2 74083359 74083569 + 7.19 0.000 intron (NM_001287491, intron 6 of 11) intron (NM_001287491, intron 6 of 11) 64448 NM_001035505 388962 Hs.61472 NM_212552 ENSG00000163170 BOLA3 MMDS2 bolA family member 3 protein-coding chr6-2339 chr6 124298680 124298890 + 7.19 0.000 intron (NM_001040214, intron 2 of 6) intron (NM_001040214, intron 2 of 6) 15780 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr7-7515 chr7 103298492 103298702 + 7.19 0.000 exon (NM_004279, exon 2 of 13) exon (NM_004279, exon 2 of 13) 1162 NM_004279 9512 Hs.184211 NM_004279 ENSG00000105819 PMPCB Beta-MPP|MPP11|MPPB|MPPP52|P-52 peptidase, mitochondrial processing beta subunit protein-coding chr11-2495 chr11 65947893 65948103 + 7.19 0.000 intron (NM_152762, intron 3 of 7) intron (NM_152762, intron 3 of 7) 2354 NM_152762 254187 Hs.350671 NM_152762 ENSG00000175513 TSGA10IP FAM161C testis specific 10 interacting protein protein-coding chr15-3576 chr15 44215739 44215949 + 7.19 0.000 Intergenic Intergenic -20550 NR_104455 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr11-9448 chr11 61191931 61192141 + 7.19 0.000 Intergenic AluSp|SINE|Alu -11479 NM_001079807 643834 Hs.601055 NM_001079807 ENSG00000229859 PGA3 - pepsinogen 3, group I (pepsinogen A) protein-coding chr8-3268 chr8 15797747 15797957 + 7.19 0.000 Intergenic HERVL40-int|LTR|ERVL 257589 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr1-11665 chr1 2060839 2061049 + 7.19 0.000 intron (NM_002744, intron 4 of 17) intron (NM_002744, intron 4 of 17) 10533 NM_002744 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr5-5581 chr5 150010203 150010413 + 7.19 0.000 exon (NM_014983, exon 4 of 20) exon (NM_014983, exon 4 of 20) 9569 NM_001366501 22993 Hs.719189 NM_014983 ENSG00000113716 HMGXB3 HMGX3|SMF HMG-box containing 3 protein-coding chrX-3236 chrX 67807198 67807408 + 7.19 0.000 Intergenic ERVL-B4-int|LTR|ERVL 262680 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr2-5872 chr2 240214008 240214218 + 7.19 0.000 Intergenic Intergenic -73455 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr7-7835 chr7 4376766 4376976 + 7.19 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -242034 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr2-13489 chr2 148640986 148641196 + 7.19 0.000 Intergenic Intergenic -3660 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr3-5290 chr3 123336514 123336724 + 7.19 0.000 intron (NM_183357, intron 3 of 20) intron (NM_183357, intron 3 of 20) 79723 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr2-4497 chr2 10386243 10386453 + 7.19 0.000 intron (NM_001258359, intron 1 of 4) intron (NM_001258359, intron 1 of 4) 17584 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr17-5489 chr17 41651694 41651904 + 7.19 0.000 Intergenic (CCCAGCG)n|Simple_repeat|Simple_repeat -11600 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo chr12-6941 chr12 26119450 26119660 + 7.19 0.000 TTS (NM_030762) TTS (NM_030762) 5482 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr9-6202 chr9 97101923 97102133 + 7.19 0.000 Intergenic Intergenic -20083 NR_002942 340508 Hs.680438 NR_002942 ENSG00000228376 GAS2L1P2 - growth arrest specific 2 like 1 pseudogene 2 pseudo chr8-6941 chr8 104336340 104336550 + 7.19 0.000 Intergenic Intergenic -3351 NM_001257317 81501 Hs.652230 NM_030788 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding chr9-6808 chr9 35571441 35571651 + 7.19 0.000 Intergenic AluJb|SINE|Alu -7668 NM_001287238 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr20-3504 chr20 62768690 62768900 + 7.19 0.000 Intergenic Intergenic 8061 NR_046224 100652730 Hs.254951 NR_046224 LINC00659 - long intergenic non-protein coding RNA 659 ncRNA chr7-5534 chr7 45229326 45229536 + 7.19 0.000 Intergenic Intergenic 71640 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr18-1510 chr18 3526608 3526818 + 7.19 0.000 intron (NM_001242762, intron 7 of 9) intron (NM_001242762, intron 7 of 9) 60463 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr3-8652 chr3 177061295 177061505 + 7.19 0.000 intron (NM_001321195, intron 2 of 14) intron (NM_001321195, intron 2 of 14) 135078 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr15-4787 chr15 71448725 71448935 + 7.19 0.000 intron (NM_024817, intron 6 of 16) intron (NM_024817, intron 6 of 16) -98406 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr8-6223 chr8 37947320 37947530 + 7.19 0.000 Intergenic L2|LINE|L2 -7301 NM_152413 137362 Hs.380740 NM_152413 ENSG00000169154 GOT1L1 - glutamic-oxaloacetic transaminase 1 like 1 protein-coding chr21-1571 chr21 14259648 14259858 + 7.19 0.000 Intergenic ERVL-E-int|LTR|ERVL -14046 NR_003088 150000 Hs.366575 NM_138726 ENSG00000243064 ABCC13 ABCC13P|C21orf73|PRED6 ATP binding cassette subfamily C member 13 (pseudogene) pseudo chr5-7092 chr5 177274776 177274986 + 7.19 0.000 intron (NM_172349, intron 18 of 23) AluSz|SINE|Alu 28838 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr15-3718 chr15 50845765 50845975 + 7.19 0.000 Intergenic L1PB2|LINE|L1 -62813 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr14-3966 chr14 24865988 24866198 + 7.19 0.000 intron (NM_001351943, intron 3 of 6) MLT2D|LTR|ERVL 182907 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr7-3538 chr7 11057701 11057911 + 7.19 0.000 intron (NR_033436, intron 13 of 16) intron (NR_033436, intron 13 of 16) 83934 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr12-4087 chr12 55642459 55642669 + 7.19 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 5672 NM_206899 121130 Hs.554551 NM_206899 ENSG00000175398 OR10P1 OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701 olfactory receptor family 10 subfamily P member 1 protein-coding chr2-13003 chr2 106635711 106635921 + 7.19 0.000 Intergenic L2b|LINE|L2 148452 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr7-6001 chr7 103765254 103765464 + 7.19 0.000 intron (NM_005045, intron 4 of 64) intron (NM_005045, intron 4 of 64) 224157 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr2-7871 chr2 52518449 52518659 + 7.19 0.000 Intergenic Intergenic 147906 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr1-12038 chr1 112037287 112037497 + 7.19 0.000 Intergenic L2b|LINE|L2 46856 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr4-5936 chr4 152128461 152128671 + 7.19 0.000 Intergenic L1PB1|LINE|L1 27748 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr8-5772 chr8 142306072 142306282 + 7.19 0.000 intron (NM_001366903, intron 9 of 9) intron (NM_001366903, intron 9 of 9) 97005 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr10-6245 chr10 70283008 70283218 + 7.19 0.000 intron (NM_022146, intron 1 of 3) intron (NM_022146, intron 1 of 3) 891 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr22-2712 chr22 38166717 38166927 + 7.19 0.000 intron (NM_001349869, intron 2 of 16) MIRc|SINE|MIR 15008 NM_003560 8398 Hs.170479 NM_003560 ENSG00000184381 PLA2G6 CaI-PLA2|GVI|INAD1|IPLA2-VIA|NBIA2|NBIA2A|NBIA2B|PARK14|PLA2|PNPLA9|iPLA2|iPLA2beta phospholipase A2 group VI protein-coding chr7-8305 chr7 40112239 40112449 + 7.19 0.000 Intergenic MIR|SINE|MIR 22278 NM_138701 136647 Hs.654989 NM_138701 ENSG00000168303 MPLKIP ABHS|C7orf11|ORF20|TTD4 M-phase specific PLK1 interacting protein protein-coding chr2-9497 chr2 236510672 236510882 + 7.19 0.000 Intergenic MIR|SINE|MIR -3242 NM_001270584 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr1-8746 chr1 244798694 244798904 + 7.19 0.000 Intergenic AluJb|SINE|Alu -36507 NM_001312871 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr7-4649 chr7 31237753 31237963 + 7.19 0.000 Intergenic Intergenic 102868 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr3-8173 chr3 38267306 38267516 + 7.19 0.000 intron (NM_004256, intron 1 of 9) intron (NM_004256, intron 1 of 9) 1599 NM_004256 9390 Hs.225941 NM_004256 ENSG00000172940 SLC22A13 OAT10|OCTL1|OCTL3|ORCTL-3|ORCTL3 solute carrier family 22 member 13 protein-coding chr17-6054 chr17 79394812 79395022 + 7.19 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 121231 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chrX-4858 chrX 104821360 104821570 + 7.19 0.000 intron (NM_017416, intron 2 of 10) L1PA7|LINE|L1 255266 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr2-10515 chr2 230443680 230443890 + 7.19 0.000 intron (NM_001080391, intron 3 of 28) intron (NM_001080391, intron 3 of 28) 27029 NM_001206704 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr1-4522 chr1 38026728 38026938 + 7.19 0.000 Intergenic Intergenic 14099 NM_016037 51118 Hs.472038 NM_016037 ENSG00000183520 UTP11 CGI-94|CGI94|UTP11L UTP11 small subunit processome component protein-coding chr20-2291 chr20 4882238 4882448 + 7.19 0.000 intron (NM_005116, intron 9 of 16) AluSx1|SINE|Alu -58735 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr16-5282 chr16 61408784 61408994 + 7.19 0.000 Intergenic L1MC3|LINE|L1 -353123 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr12-3200 chr12 53828718 53828928 + 7.19 0.000 Intergenic Intergenic -71789 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr7-5373 chr7 31566850 31567060 + 7.19 0.000 intron (NM_194300, intron 3 of 12) intron (NM_194300, intron 3 of 12) 13953 NM_194300 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr8-3655 chr8 12590257 12590467 + 7.19 0.000 intron (NR_047662, intron 6 of 8) L1ME3G|LINE|L1 75249 NR_047662 729732 Hs.322761 NR_047662 ENSG00000283674 LOC729732 - uncharacterized LOC729732 ncRNA chr12-7897 chr12 107305154 107305364 + 7.19 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -13175 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr2-11340 chr2 202661068 202661278 + 7.19 0.000 intron (NM_173511, intron 1 of 7) L1MEf|LINE|L1 26204 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr8-3608 chr8 142534866 142535076 + 7.19 0.000 intron (NM_001702, intron 25 of 30) intron (NM_001702, intron 25 of 30) 79508 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr19-6732 chr19 38278250 38278460 + 7.19 0.000 intron (NM_001166103, intron 1 of 5) intron (NM_001166103, intron 1 of 5) 13782 NM_021102 10653 Hs.31439 NM_021102 ENSG00000167642 SPINT2 DIAR3|HAI-2|HAI2|Kop|PB serine peptidase inhibitor, Kunitz type 2 protein-coding chr19-7043 chr19 50932761 50932971 + 7.19 0.000 Intergenic LTR86A1|LTR|ERVL 20172 NM_001077492 25818 Hs.50915 NM_012427 ENSG00000167754 KLK5 KLK-L2|KLKL2|SCTE kallikrein related peptidase 5 protein-coding chr4-6549 chr4 180844083 180844293 + 7.19 0.000 Intergenic AluJr4|SINE|Alu 314961 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr9-4558 chr9 87764248 87764458 + 7.19 0.000 Intergenic Intergenic -8562 NR_027917 392360 Hs.690450 NM_001023564 ENSG00000188029 CTSL3P CTSL3|HCTSL-s cathepsin L family member 3, pseudogene pseudo chr4-6208 chr4 54793100 54793310 + 7.19 0.000 Intergenic Intergenic 135277 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr3-8746 chr3 650622 650832 + 7.19 0.000 intron (NR_110118, intron 1 of 3) intron (NR_110118, intron 1 of 3) 58622 NR_110118 101927215 Hs.650700 NR_110118 ENSG00000224957 LINC01266 - long intergenic non-protein coding RNA 1266 ncRNA chr17-5371 chr17 31202460 31202670 + 7.19 0.000 intron (NM_001042492, intron 11 of 57) MER20B|DNA|hAT-Charlie 94674 NM_002544 4974 Hs.113874 NM_002544 ENSG00000126861 OMG OMGP oligodendrocyte myelin glycoprotein protein-coding chr1-8121 chr1 9978585 9978795 + 7.19 0.000 intron (NM_001297778, intron 3 of 4) intron (NM_001297778, intron 3 of 4) 11309 NR_049882 100847055 NR_049882 ENSG00000265521 MIR5697 - microRNA 5697 ncRNA chr12-2684 chr12 78633351 78633561 + 7.19 0.000 Intergenic MamRTE1|LINE|RTE-BovB -230526 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr16-5628 chr16 63227063 63227273 + 7.19 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -1190730 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr5-4864 chr5 64690197 64690407 + 7.19 0.000 promoter-TSS (NM_001164442) promoter-TSS (NM_001164442) -201 NM_001164442 100132916 Hs.591776 NM_001164442 ENSG00000145642 SHISAL2B FAM159B shisa like 2B protein-coding chr12-5668 chr12 92140048 92140258 + 7.19 0.000 TTS (NM_001731) TTS (NM_001731) 1560 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr11-8063 chr11 28301827 28302037 + 7.19 0.000 intron (NM_001113528, intron 6 of 6) AluJr|SINE|Alu 175616 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr7-5758 chr7 75013631 75013841 + 7.19 0.000 intron (NM_001145064, intron 2 of 8) AluSz|SINE|Alu 49031 NM_001145064 729438 Hs.594823 NM_001145064 ENSG00000274070 CASTOR2 GATSL1|GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 protein-coding chr15-5097 chr15 88655887 88656097 + 7.19 0.000 non-coding (NR_130134, exon 3 of 3) non-coding (NR_130134, exon 3 of 3) 16976 NM_001303236 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr11-7985 chr11 10900663 10900873 + 7.19 0.000 Intergenic MIRc|SINE|MIR 42551 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr4-2766 chr4 15806130 15806340 + 7.19 0.000 intron (NR_132660, intron 1 of 6) intron (NR_132660, intron 1 of 6) 27907 NM_001775 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chrX-1576 chrX 70425910 70426120 + 7.19 0.000 intron (NM_001171193, intron 3 of 14) intron (NM_001171193, intron 3 of 14) 2984 NM_017711 54857 Hs.438712 NM_017711 ENSG00000130055 GDPD2 GDE3|OBDPF glycerophosphodiester phosphodiesterase domain containing 2 protein-coding chr5-5270 chr5 122153126 122153336 + 7.19 0.000 3' UTR (NM_207317, exon 2 of 2) 3' UTR (NM_207317, exon 2 of 2) -6945 NM_001195535 100505841 Hs.733368 NM_001195535 LOC100505841 - zinc finger protein 474-like protein-coding chr5-5941 chr5 80551987 80552197 + 7.19 0.000 Intergenic Intergenic 18188 NM_001004441 340120 Hs.519404 NM_001004441 ENSG00000189127 ANKRD34B DP58 ankyrin repeat domain 34B protein-coding chr13-4178 chr13 89100827 89101037 + 7.19 0.000 Intergenic Intergenic -134359 NR_047025 100874172 Hs.569291 NR_047025 LINC00440 - long intergenic non-protein coding RNA 440 ncRNA chr2-12127 chr2 36447185 36447395 + 7.19 0.000 intron (NM_016441, intron 4 of 16) intron (NM_016441, intron 4 of 16) 91512 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr15-1577 chr15 73966018 73966228 + 7.19 0.000 Intergenic L2a|LINE|L2 26172 NM_001256675 9399 Hs.194816 NM_004809 ENSG00000067221 STOML1 SLP-1|STORP|hUNC-24 stomatin like 1 protein-coding chr18-2234 chr18 69123748 69123958 + 7.19 0.000 Intergenic Intergenic -277035 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr11-5321 chr11 50302536 50302746 + 7.19 0.000 Intergenic AluSz|SINE|Alu -4179 NR_003034 441601 Hs.144683 NR_003034 ENSG00000255042 LOC441601 - septin 7 pseudogene pseudo chr2-14374 chr2 219303034 219303244 + 7.19 0.000 intron (NM_001199764, intron 4 of 22) intron (NM_001199764, intron 4 of 22) 5831 NM_001199764 5798 Hs.89655 NM_002846 ENSG00000054356 PTPRN IA-2|IA-2/PTP|IA2|ICA512|R-PTP-N protein tyrosine phosphatase receptor type N protein-coding chr14-4630 chr14 53686414 53686624 + 7.19 0.000 Intergenic Intergenic 261965 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr3-7504 chr3 163416727 163416937 + 7.19 0.000 Intergenic Intergenic -113531 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr10-5125 chr10 50374235 50374445 + 7.19 0.000 intron (NM_147156, intron 6 of 10) L2a|LINE|L2 -125730 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr8-2515 chr8 22117645 22117855 + 7.19 0.000 intron (NM_005144, intron 16 of 18) intron (NM_005144, intron 16 of 18) -8331 NM_024815 79873 Hs.527101 NM_024815 ENSG00000275074 NUDT18 MTH3 nudix hydrolase 18 protein-coding chr6-3670 chr6 149044598 149044808 + 7.19 0.000 intron (NM_005715, intron 7 of 7) intron (NM_005715, intron 7 of 7) -12042 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr12-5796 chr12 15726594 15726804 + 7.19 0.000 intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 62689 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr5-5725 chr5 168897056 168897266 + 7.19 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) -116066 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr10-7169 chr10 103822580 103822790 + 7.19 0.000 intron (NM_014631, intron 1 of 13) intron (NM_014631, intron 1 of 13) 32721 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chrX-2373 chrX 68723558 68723768 + 7.19 0.000 exon (NM_001142503, exon 13 of 15) exon (NM_001142503, exon 13 of 15) 30024 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr11-3388 chr11 130606825 130607035 + 7.19 0.000 Intergenic Intergenic -59805 NR_107019 102466873 NR_107019 ENSG00000274999 MIR8052 hsa-mir-8052 microRNA 8052 ncRNA chrX-1138 chrX 33554903 33555113 + 7.19 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -215620 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-8385 chr3 96701240 96701450 + 7.19 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -113249 NM_001080448 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr15-3888 chr15 96308349 96308559 + 7.19 0.000 intron (NR_102744, intron 1 of 1) intron (NR_102744, intron 1 of 1) -17592 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr5-8377 chr5 123279213 123279423 + 7.19 0.000 Intergenic LTR67B|LTR|ERVL 144274 NM_153223 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr22-3234 chr22 42409134 42409344 + 7.19 0.000 intron (NM_001318323, intron 2 of 4) intron (NM_001318323, intron 2 of 4) 23120 NM_001318323 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr4-7689 chr4 87821160 87821370 + 7.19 0.000 promoter-TSS (NM_001184694) promoter-TSS (NM_001184694) -133 NM_001184694 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr16-2966 chr16 11396107 11396317 + 7.19 0.000 intron (NM_001370704, intron 54 of 66) intron (NM_001370704, intron 54 of 66) 50753 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chrX-4899 chrX 107496869 107497079 + 7.19 0.000 Intergenic Intergenic -25476 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr7-9137 chr7 110128055 110128265 + 7.19 0.000 Intergenic LTR16D|LTR|ERVL -167947 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr17-4083 chr17 79677194 79677404 + 7.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR 29950 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr2-7533 chr2 22192251 22192461 + 7.19 0.000 Intergenic Intergenic -344123 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr1-15886 chr1 183198581 183198791 + 7.19 0.000 intron (NM_005562, intron 1 of 22) intron (NM_005562, intron 1 of 22) 12422 NM_018891 3918 Hs.591484 NM_005562 ENSG00000058085 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin subunit gamma 2 protein-coding chr9-8677 chr9 130451680 130451890 + 7.19 0.000 intron (NM_000050, intron 2 of 15) MIRb|SINE|MIR 6824 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr2-9877 chr2 204681433 204681643 + 7.19 0.000 intron (NM_205863, intron 1 of 21) intron (NM_205863, intron 1 of 21) 136063 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr1-14122 chr1 31515328 31515538 + 7.19 0.000 Intergenic Intergenic -3002 NR_027085 284551 Hs.658659 NR_027085 LINC01226 - long intergenic non-protein coding RNA 1226 ncRNA chr9-6405 chr9 36101487 36101697 + 7.19 0.000 intron (NM_021111, intron 11 of 20) intron (NM_021111, intron 11 of 20) -34944 NR_104641 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr3-10521 chr3 138230805 138231015 + 7.19 0.000 intron (NM_213654, intron 7 of 12) intron (NM_213654, intron 7 of 12) 43379 NM_001267042 25852 Hs.744868 NM_014154 ENSG00000114098 ARMC8 GID5|HSPC056|S863-2|VID28 armadillo repeat containing 8 protein-coding chr14-2870 chr14 32761578 32761788 + 7.19 0.000 intron (NM_004274, intron 11 of 13) intron (NM_004274, intron 11 of 13) -177196 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr3-10857 chr3 167785007 167785217 + 7.19 0.000 intron (NM_005025, intron 1 of 8) AluSc|SINE|Alu 49389 NM_005025 5274 Hs.478153 NM_005025 ENSG00000163536 SERPINI1 PI12|neuroserpin serpin family I member 1 protein-coding chr10-7754 chr10 33377126 33377336 + 7.19 0.000 Intergenic Charlie15a|DNA|hAT-Charlie -42326 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr19-3401 chr19 15969816 15970026 + 7.19 0.000 Intergenic L1MC1|LINE|L1 20913 NM_001004465 126541 Hs.553579 NM_001004465 ENSG00000176231 OR10H4 OR19-28 olfactory receptor family 10 subfamily H member 4 protein-coding chrX-1207 chrX 71629651 71629861 + 7.19 0.000 Intergenic Intergenic -11245 NM_001142797 2833 Hs.198252 NM_001504 ENSG00000186810 CXCR3 CD182|CD183|CKR-L2|CMKAR3|GPR9|IP10-R|Mig-R|MigR C-X-C motif chemokine receptor 3 protein-coding chr13-1768 chr13 113231264 113231474 + 7.19 0.000 intron (NM_001008895, intron 5 of 19) intron (NM_001008895, intron 5 of 19) 21756 NM_001354943 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr7-8502 chr7 52264840 52265050 + 7.19 0.000 Intergenic Intergenic -770688 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr10-6593 chr10 83313073 83313283 + 7.19 0.000 Intergenic Intergenic 363911 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr5-6898 chr5 132251087 132251297 + 7.19 0.000 Intergenic Intergenic -6466 NM_001131027 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr20-2842 chr20 61730279 61730489 + 7.19 0.000 intron (NM_001252339, intron 1 of 14) L1MC2|LINE|L1 -10636 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr17-4846 chr17 61693891 61694101 + 7.19 0.000 intron (NM_032043, intron 17 of 19) L1MD|LINE|L1 -102777 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr16-6611 chr16 67512387 67512597 + 7.19 0.000 Intergenic AluJo|SINE|Alu 16253 NR_104656 100505942 Hs.121233 NR_104656 LOC100505942 - uncharacterized LOC100505942 ncRNA chr19-6576 chr19 21239156 21239366 + 7.19 0.000 Intergenic L1MB2|LINE|L1 90149 NM_021269 7562 Hs.466296 NM_021269 ENSG00000182141 ZNF708 KOX8|ZNF15|ZNF15L1 zinc finger protein 708 protein-coding chr21-1043 chr21 26258186 26258396 + 7.19 0.000 Intergenic MSTA|LTR|ERVL-MaLR -87163 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr11-8996 chr11 23233156 23233366 + 7.19 0.000 Intergenic L1MDa|LINE|L1 185929 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr9-6816 chr9 35954947 35955157 + 7.19 0.000 Intergenic Intergenic 3102 NM_019897 56656 Hs.553540 NM_019897 ENSG00000278889 OR2S2 OR37A|OST715 olfactory receptor family 2 subfamily S member 2 (gene/pseudogene) protein-coding chr3-10175 chr3 117937020 117937230 + 7.19 0.000 Intergenic Intergenic -246200 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr6-2681 chr6 16770011 16770221 + 7.19 0.000 Intergenic Intergenic -8626 NM_001128164 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr1-12812 chr1 85421125 85421335 + 7.19 0.000 intron (NM_001134445, intron 2 of 6) MSTA|LTR|ERVL-MaLR -16724 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr20-2074 chr20 17485202 17485412 + 7.19 0.000 TTS (NM_001201529) TTS (NM_001201529) 46072 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr10-7033 chr10 79335340 79335550 + 7.19 0.000 Intergenic Intergenic -12024 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr4-5701 chr4 31365701 31365911 + 7.19 0.000 Intergenic Intergenic -140738 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr3-5095 chr3 47540731 47540941 + 7.19 0.000 Intergenic Intergenic -27124 NM_001031703 54859 Hs.311100 NM_017713 ENSG00000163832 ELP6 C3orf75|TMEM103 elongator acetyltransferase complex subunit 6 protein-coding chr4-5842 chr4 107379220 107379430 + 7.19 0.000 Intergenic MIRc|SINE|MIR 340909 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr8-6620 chr8 76276159 76276369 + 7.19 0.000 Intergenic L1MB2|LINE|L1 -130390 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr3-9630 chr3 59103631 59103841 + 7.19 0.000 Intergenic MER57-int|LTR|ERV1 -53704 NM_001351534 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chrX-2677 chrX 117600101 117600311 + 7.19 0.000 Intergenic L1M1|LINE|L1 373532 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr18-3223 chr18 47674842 47675052 + 7.19 0.000 Intergenic L2b|LINE|L2 255712 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr6-5665 chr6 98871234 98871444 + 7.19 0.000 non-coding (NR_103836, exon 8 of 8) non-coding (NR_103836, exon 8 of 8) 36765 NM_005604 5454 Hs.182505 NM_005604 ENSG00000184486 POU3F2 BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7 POU class 3 homeobox 2 protein-coding chr1-11282 chr1 8755462 8755672 + 7.19 0.000 intron (NM_001042681, intron 1 of 22) Arthur1A|DNA|hAT-Tip100 62073 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr12-5891 chr12 55696837 55697047 + 7.19 0.000 exon (NM_001144997, exon 12 of 25) exon (NM_001144997, exon 12 of 25) 10962 NM_001367994 3679 Hs.524484 NM_002206 ENSG00000135424 ITGA7 - integrin subunit alpha 7 protein-coding chr8-1648 chr8 139147427 139147637 + 7.19 0.000 Intergenic Intergenic -233491 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr3-6201 chr3 61733843 61734053 + 7.19 0.000 intron (NM_002841, intron 1 of 29) AluSz6|SINE|Alu 172377 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr3-9366 chr3 46967916 46968126 + 7.19 0.000 intron (NM_144716, intron 2 of 7) intron (NM_144716, intron 2 of 7) 8480 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr1-16635 chr1 239898134 239898344 + 7.19 0.000 non-coding (NR_046582, exon 2 of 2) non-coding (NR_046582, exon 2 of 2) 1633 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr8-6292 chr8 42627869 42628079 + 7.19 0.000 Intergenic Intergenic -69392 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr7-3859 chr7 102451733 102451943 + 7.19 0.000 3' UTR (NM_001271818, exon 4 of 4) 3' UTR (NM_001271818, exon 4 of 4) 13025 NM_017621 54784 Hs.658598 NM_017621 ENSG00000160993 ALKBH4 ABH4 alkB homolog 4, lysine demethylase protein-coding chr18-930 chr18 72544440 72544650 + 7.19 0.000 promoter-TSS (NM_182511) promoter-TSS (NM_182511) -203 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr5-6983 chr5 149421363 149421573 + 7.19 0.000 intron (NR_105059, intron 2 of 5) intron (NR_105059, intron 2 of 5) -7450 NR_029684 406935 NR_029684 ENSG00000284182 MIR143 MIRN143|mir-143 microRNA 143 ncRNA chr16-6263 chr16 30914935 30915145 + 7.19 0.000 Intergenic Intergenic -8015 NM_001282351 54620 Hs.152149 NM_019085 ENSG00000099364 FBXL19 CXXC11|Fbl19|JHDM1C F-box and leucine rich repeat protein 19 protein-coding chr11-6832 chr11 95380741 95380951 + 7.19 0.000 Intergenic L2c|LINE|L2 -148371 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr19-5286 chr19 443865 444075 + 7.19 0.000 intron (NM_012435, intron 1 of 12) (TGGA)n|Simple_repeat|Simple_repeat 17026 NM_012435 25759 Hs.30965 NM_012435 ENSG00000129946 SHC2 SCK|SHCB|SLI SHC adaptor protein 2 protein-coding chr16-5315 chr16 73529112 73529322 + 7.19 0.000 Intergenic Intergenic 142412 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr2-6542 chr2 212765157 212765367 + 7.19 0.000 Intergenic Intergenic -30069 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr5-4713 chr5 41172128 41172338 + 7.19 0.000 exon (NM_001115131, exon 9 of 18) exon (NM_001115131, exon 9 of 18) 41299 NM_000065 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding chr13-4289 chr13 98756899 98757109 + 7.19 0.000 Intergenic MER4B|LTR|ERV1 -4332 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr6-6377 chr6 73556645 73556855 + 7.19 0.000 Intergenic Intergenic -35718 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr10-6046 chr10 127482723 127482933 + 7.19 0.000 Intergenic Intergenic -66521 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr15-3156 chr15 67681390 67681600 + 7.19 0.000 intron (NM_001206804, intron 13 of 21) intron (NM_001206804, intron 13 of 21) 132401 NM_001206804 5607 Hs.114198 NM_002757 ENSG00000137764 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding chr2-10321 chr2 150613371 150613581 + 7.19 0.000 Intergenic Intergenic -15421 NR_110245 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr4-5074 chr4 145958889 145959099 + 7.19 0.000 Intergenic L1MEc|LINE|L1 -20171 NM_001306215 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr10-6903 chr10 44995859 44996069 + 7.19 0.000 TTS (NM_032023) TTS (NM_032023) 4946 NM_001039380 220979 Hs.707791 NM_001039380 C10orf25 - chromosome 10 open reading frame 25 protein-coding chr20-3692 chr20 14291857 14292067 + 7.19 0.000 intron (NM_001351663, intron 3 of 17) LTR16A1|LTR|ERVL 45650 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr1-14594 chr1 53978674 53978884 + 7.19 0.000 Intergenic L2c|LINE|L2 32429 NM_052940 115353 Hs.40094 NM_052940 ENSG00000116212 LRRC42 dJ167A19.4 leucine rich repeat containing 42 protein-coding chr4-4315 chr4 30256206 30256416 + 7.19 0.000 Intergenic L1PBa|LINE|L1 -464058 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr18-653 chr18 44680186 44680396 + 7.19 0.000 promoter-TSS (NM_015559) promoter-TSS (NM_015559) 218 NM_001130110 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr14-4576 chr14 49284221 49284431 + 7.19 0.000 Intergenic L2a|LINE|L2 302054 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr10-8353 chr10 80170983 80171193 + 7.19 0.000 intron (NM_145869, intron 4 of 16) intron (NM_145869, intron 4 of 16) 33403 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr10-5714 chr10 100881829 100882039 + 7.19 0.000 Intergenic Intergenic -31029 NM_001136123 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr5-4360 chr5 170106182 170106392 + 7.19 0.000 exon (NM_144769, exon 1 of 2) exon (NM_144769, exon 1 of 2) 390 NM_144769 2299 Hs.87236 NM_012188 ENSG00000168269 FOXI1 FKH10|FKHL10|FREAC-6|FREAC6|HFH-3|HFH3 forkhead box I1 protein-coding chr2-14261 chr2 214394348 214394558 + 7.19 0.000 intron (NR_047660, intron 14 of 14) intron (NR_047660, intron 14 of 14) -16601 NM_001080500 402117 Hs.534834 NM_001080500 ENSG00000174453 VWC2L - von Willebrand factor C domain containing 2 like protein-coding chr6-8115 chr6 127051949 127052159 + 7.19 0.000 Intergenic L1PA16|LINE|L1 -66617 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr11-10520 chr11 119627973 119628183 + 7.19 0.000 Intergenic Intergenic 101122 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr4-8144 chr4 128227961 128228171 + 7.19 0.000 Intergenic Intergenic 59747 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chr17-4807 chr17 50471338 50471548 + 7.19 0.000 intron (NR_110232, intron 2 of 5) intron (NR_110232, intron 2 of 5) -2563 NM_001267 1101 Hs.97220 NM_001267 ENSG00000136457 CHAD SLRR4A chondroadherin protein-coding chr2-10325 chr2 151892041 151892251 + 7.19 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) -63725 NM_177985 26225 Hs.470233 NM_012097 ENSG00000162980 ARL5A ARFLP5|ARL5 ADP ribosylation factor like GTPase 5A protein-coding chr4-6550 chr4 180923357 180923567 + 7.19 0.000 Intergenic Intergenic 235687 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr11-4824 chr11 11218480 11218690 + 7.19 0.000 Intergenic Intergenic 134665 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr21-698 chr21 28959467 28959677 + 7.19 0.000 exon (NM_001320766, exon 12 of 29) exon (NM_001320766, exon 12 of 29) 33305 NM_001320766 26046 Hs.288773 NM_015565 ENSG00000198862 LTN1 C21orf10|C21orf98|RNF160|ZNF294 listerin E3 ubiquitin protein ligase 1 protein-coding chr15-3217 chr15 73319099 73319309 + 7.19 0.000 TTS (NM_005477) TTS (NM_005477) 19294 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr20-2653 chr20 44054762 44054972 + 7.19 0.000 intron (NM_001098798, intron 5 of 7) intron (NM_001098798, intron 5 of 7) 108971 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr10-5313 chr10 70784636 70784846 + 7.19 0.000 non-coding (NR_134531, exon 2 of 10) non-coding (NR_134531, exon 2 of 10) 636 NM_001318243 219793 Hs.386698 NM_152710 ENSG00000166220 TBATA C10orf27|SPATIAL thymus, brain and testes associated protein-coding chr4-5665 chr4 16083466 16083676 + 7.19 0.000 promoter-TSS (NM_001145850) promoter-TSS (NM_001145850) 158 NM_001145852 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr8-3545 chr8 123478422 123478632 + 7.19 0.000 Intergenic L2a|LINE|L2 53616 NM_148177 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr14-4699 chr14 57885273 57885483 + 7.19 0.000 Intergenic MIR|SINE|MIR -19286 NM_001306087 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr14-2781 chr14 20456059 20456269 + 7.19 0.000 intron (NM_001244249, intron 3 of 4) intron (NM_001244249, intron 3 of 4) 938 NM_080649 328 Hs.73722 NM_001641 ENSG00000100823 APEX1 APE|APE1|APEN|APEX|APX|HAP1|REF1 apurinic/apyrimidinic endodeoxyribonuclease 1 protein-coding chr15-3703 chr15 43244231 43244441 + 7.19 0.000 intron (NM_004245, intron 5 of 11) L2c|LINE|L2 22592 NM_201631 9333 Hs.129719 NM_004245 ENSG00000104055 TGM5 PSS2|TGASE5|TGASEX|TGM6|TGMX|TGX transglutaminase 5 protein-coding chr17-4815 chr17 51843720 51843930 + 7.19 0.000 intron (NM_001082533, intron 4 of 9) Tigger18a|DNA|TcMar-Tigger 314889 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr4-6658 chr4 2256832 2257042 + 7.19 0.000 intron (NM_006454, intron 3 of 5) intron (NM_006454, intron 3 of 5) 5172 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr5-7586 chr5 42196714 42196924 + 7.19 0.000 Intergenic Intergenic -21474 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA chr20-3876 chr20 30362119 30362329 + 7.19 0.000 Intergenic Intergenic -14940 NR_145491 284802 Hs.653099 NM_207350 FRG1BP C20orf80|FRG1B|bA348I14.2 FSHD region gene 1 family member B, pseudogene pseudo chr20-3079 chr20 16359770 16359980 + 7.19 0.000 intron (NM_024704, intron 22 of 25) intron (NM_024704, intron 22 of 25) 213573 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr11-2962 chr11 77047222 77047432 + 7.19 0.000 Intergenic AluJb|SINE|Alu 12929 NM_138706 192134 Hs.352622 NM_138706 ENSG00000198488 B3GNT6 B3Gn-T6|BGnT-6|beta-1,3-Gn-T6|beta3Gn-T6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 protein-coding chr5-6111 chr5 26436667 26436877 + 7.19 0.000 Intergenic AluSc5|SINE|Alu 601814 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr19-6546 chr19 18926379 18926589 + 7.19 0.000 intron (NM_019070, intron 10 of 12) intron (NM_019070, intron 10 of 12) 6769 NM_019070 54555 Hs.143187 NM_019070 ENSG00000105671 DDX49 Dbp8|R27090_2 DEAD-box helicase 49 protein-coding chr3-1875 chr3 128445577 128445787 + 7.19 0.000 Intergenic (GGTGGT)n|Simple_repeat|Simple_repeat -17912 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr2-6370 chr2 108226830 108227040 + 7.19 0.000 Intergenic MER92-int|LTR|ERV1 -9094 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA chr2-11620 chr2 4017677 4017887 + 7.19 0.000 Intergenic MER11C|LTR|ERVK 43621 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr20-3256 chr20 1580072 1580282 + 7.19 0.000 intron (NM_006065, intron 1 of 5) MLT1D|LTR|ERVL-MaLR 8520 NM_001330639 10326 Hs.664861 NM_006065 ENSG00000101307 SIRPB1 CD172b|SIRP-BETA-1 signal regulatory protein beta 1 protein-coding chr3-10101 chr3 111448305 111448515 + 7.19 0.000 Intergenic L1PA15|LINE|L1 -93787 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr4-3524 chr4 155404030 155404240 + 7.19 0.000 Intergenic Intergenic -27170 NM_001039580 79884 Hs.61271 NM_001039580 ENSG00000164114 MAP9 ASAP microtubule associated protein 9 protein-coding chr9-4299 chr9 121513890 121514100 + 7.19 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -13968 NR_003191 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr6-5174 chr6 129053445 129053655 + 7.19 0.000 intron (NM_000426, intron 2 of 64) L2a|LINE|L2 170409 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr5-2778 chr5 172659495 172659705 + 7.19 0.000 intron (NM_001308177, intron 1 of 3) intron (NM_001308177, intron 1 of 3) -2565 NR_049799 100847029 NR_049799 ENSG00000265160 MIR5003 - microRNA 5003 ncRNA chr22-3801 chr22 30230799 30231009 + 7.19 0.000 Intergenic MER58A|DNA|hAT-Charlie -8290 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr2-9786 chr2 113311841 113312051 + 7.19 0.000 Intergenic MIR3|SINE|MIR -33025 NM_013992 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr17-7059 chr17 63894200 63894410 + 7.19 0.000 TTS (NM_001317) TTS (NM_001317) 2269 NM_001317 1442 Hs.654390 NM_001317 ENSG00000136488 CSH1 CS-1|CSA|CSMT|GHB3|PL|hCS-1|hCS-A chorionic somatomammotropin hormone 1 protein-coding chr16-4300 chr16 28003023 28003233 + 7.19 0.000 intron (NM_001109763, intron 1 of 6) L2a|LINE|L2 60586 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr15-3999 chr15 55686720 55686930 + 7.19 0.000 intron (NM_173814, intron 2 of 19) L2c|LINE|L2 56327 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chr3-6407 chr3 99500726 99500936 + 7.19 0.000 Intergenic Intergenic -137763 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr4-3012 chr4 126242993 126243203 + 7.19 0.000 Intergenic Intergenic 735839 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr2-8037 chr2 71181787 71181997 + 7.19 0.000 TTS (NM_020459) TTS (NM_020459) 45211 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr10-4432 chr10 69437835 69438045 + 7.19 0.000 Intergenic Intergenic -13525 NM_012339 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr14-1621 chr14 102738593 102738803 + 7.19 0.000 Intergenic Intergenic -38751 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr6-7461 chr6 56570941 56571151 + 7.19 0.000 intron (NM_001144770, intron 45 of 94) intron (NM_001144770, intron 45 of 94) 71843 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr12-7150 chr12 48197556 48197766 + 7.19 0.000 Intergenic Intergenic 5631 NM_001004134 121275 Hs.446790 NM_001004134 ENSG00000172640 OR10AD1 OR10AD1P|OR12-1 olfactory receptor family 10 subfamily AD member 1 protein-coding chr3-7243 chr3 195061991 195062201 + 7.19 0.000 Intergenic LTR16|LTR|ERVL -32492 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr2-7673 chr2 29455844 29456054 + 7.19 0.000 intron (NM_004304, intron 4 of 28) intron (NM_004304, intron 4 of 28) 19428 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr1-8464 chr1 112727210 112727420 + 7.19 0.000 TTS (NM_182759) TTS (NM_182759) 6748 NM_182759 284467 Hs.439116 NM_182759 ENSG00000184599 TAFA3 FAM19A3|TAFA-3 TAFA chemokine like family member 3 protein-coding chr14-4326 chr14 22538415 22538625 + 7.19 0.000 Intergenic Intergenic 18542 NR_146543 105370400 NR_146543 ENSG00000259054 LINC02332 - long intergenic non-protein coding RNA 2332 ncRNA chr6-6816 chr6 6867486 6867696 + 7.19 0.000 Intergenic Intergenic -240152 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr11-7807 chr11 103629025 103629235 + 7.19 0.000 Intergenic Intergenic -220776 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr7-5010 chr7 797832 798042 + 7.19 0.000 Intergenic Intergenic -17620 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr15-3989 chr15 50640793 50641003 + 7.19 0.000 intron (NR_149154, intron 5 of 37) MLT1B|LTR|ERVL-MaLR 45899 NM_001301212 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr7-3333 chr7 74093197 74093407 + 7.19 0.000 promoter-TSS (NM_001204426) promoter-TSS (NM_001204426) 85 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr2-4025 chr2 102313179 102313389 + 7.19 0.000 intron (NM_001282408, intron 1 of 6) intron (NM_001282408, intron 1 of 6) 1721 NM_016232 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr3-6307 chr3 76172315 76172525 + 7.19 0.000 Intergenic L1PA5|LINE|L1 -386871 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr1-12750 chr1 66866079 66866289 + 7.19 0.000 intron (NM_024763, intron 6 of 16) AluSx1|SINE|Alu 58672 NM_207014 79819 Hs.49421 NM_024763 ENSG00000152763 WDR78 DIC4 WD repeat domain 78 protein-coding chr7-9630 chr7 150864919 150865129 + 7.19 0.000 Intergenic Intergenic 12507 NM_001272072 26 Hs.647097 NM_001091 ENSG00000002726 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase copper containing 1 protein-coding chr17-3114 chr17 19453798 19454008 + 7.19 0.000 Intergenic Intergenic 42671 NM_007148 7732 Hs.189482 NM_007148 ENSG00000128482 RNF112 BFP|ZNF179 ring finger protein 112 protein-coding chr10-2864 chr10 77602315 77602525 + 7.19 0.000 intron (NM_001271519, intron 1 of 28) L1MB7|LINE|L1 35388 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr3-7084 chr3 178606903 178607113 + 7.19 0.000 intron (NM_001278911, intron 1 of 4) MLT1A0|LTR|ERVL-MaLR 48158 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr8-5969 chr8 21164607 21164817 + 7.19 0.000 Intergenic Intergenic -133527 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA chr22-3654 chr22 22371673 22371883 + 7.19 0.000 Intergenic L2b|LINE|L2 73680 NR_027293 96610 Hs.449601 NM_080926 BMS1P20 IGL|IGLV|IGLV1 BMS1 pseudogene 20 pseudo chr6-4478 chr6 36309482 36309692 + 7.19 0.000 TTS (NM_001145716) TTS (NM_001145716) 27301 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chr22-3061 chr22 39656919 39657129 + 7.19 0.000 intron (NM_001003406, intron 9 of 35) intron (NM_001003406, intron 9 of 35) 86271 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr5-8096 chr5 96517418 96517628 + 7.19 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -84275 NM_000439 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr10-9086 chr10 125506048 125506258 + 7.19 0.000 Intergenic Intergenic -68218 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr5-6713 chr5 67931527 67931737 + 7.19 0.000 Intergenic THE1B|LTR|ERVL-MaLR 138419 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA chrX-2376 chrX 68894536 68894746 + 7.19 0.000 Intergenic Intergenic 65644 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr19-6618 chr19 30095109 30095319 + 7.19 0.000 Intergenic Intergenic 152975 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr22-2568 chr22 27859479 27859689 + 7.19 0.000 intron (NM_001284278, intron 9 of 11) intron (NM_001284278, intron 9 of 11) -57828 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr10-7262 chr10 126706032 126706242 + 7.19 0.000 Intergenic Intergenic -35627 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr3-6270 chr3 71226060 71226270 + 7.19 0.000 intron (NR_146142, intron 5 of 19) intron (NR_146142, intron 5 of 19) 18912 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr4-3724 chr4 74306857 74307067 + 7.19 0.000 Intergenic AluY|SINE|Alu -1508 NM_001270991 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr11-5824 chr11 8132226 8132436 + 7.19 0.000 intron (NM_001346690, intron 4 of 6) intron (NM_001346690, intron 4 of 6) 36694 NM_001206672 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr14-4991 chr14 76356657 76356867 + 7.19 0.000 Intergenic Intergenic -14585 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr18-2050 chr18 47408780 47408990 + 7.19 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 28389 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr12-3169 chr12 49776394 49776604 + 7.19 0.000 Intergenic Intergenic 34690 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr2-13379 chr2 137737857 137738067 + 7.19 0.000 Intergenic L1PA10|LINE|L1 189970 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr4-6764 chr4 6497921 6498131 + 7.19 0.000 intron (NM_001206994, intron 2 of 9) L1ME3Cz|LINE|L1 -25412 NM_001363388 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr14-3238 chr14 75720814 75721024 + 7.19 0.000 intron (NM_015072, intron 12 of 31) intron (NM_015072, intron 12 of 31) 59673 NM_015072 23093 Hs.709609 NM_015072 ENSG00000119685 TTLL5 CORD19|KIAA0998|STAMP tubulin tyrosine ligase like 5 protein-coding chr8-4918 chr8 98037038 98037248 + 7.19 0.000 TTS (NM_001317748) TTS (NM_001317748) 5074 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr22-3905 chr22 36163427 36163637 + 7.19 0.000 intron (NM_145641, intron 1 of 4) intron (NM_145641, intron 1 of 4) -2603 NM_145640 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr9-8007 chr9 94238480 94238690 + 7.19 0.000 intron (NR_160773, intron 1 of 2) MLT2E|LTR|ERVL -20681 NM_003448 169841 Hs.387623 NM_003448 ENSG00000175787 ZNF169 - zinc finger protein 169 protein-coding chr12-4761 chr12 52588097 52588307 + 7.19 0.000 intron (NM_001146226, intron 5 of 7) intron (NM_001146226, intron 5 of 7) 13261 NM_001146226 140807 Hs.662013 NM_080747 ENSG00000170486 KRT72 K6IRS2|K6irs|KRT6|KRT6IRS2 keratin 72 protein-coding chr3-8162 chr3 34198041 34198251 + 7.19 0.000 Intergenic Intergenic 399516 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr1-11869 chr1 40078532 40078742 + 7.19 0.000 exon (NM_000310, exon 7 of 9) exon (NM_000310, exon 7 of 9) 18615 NM_001363695 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding chr9-5525 chr9 107453091 107453301 + 7.19 0.000 intron (NR_121581, intron 2 of 7) AluSg|SINE|Alu 13389 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr15-2314 chr15 76518437 76518647 + 7.19 0.000 intron (NR_148227, intron 23 of 32) intron (NR_148227, intron 23 of 32) -68105 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr6-1941 chr6 106512309 106512519 + 7.19 0.000 exon (NM_001624, exon 1 of 20) exon (NM_001624, exon 1 of 20) 559 NM_001624 202 Hs.724262 NM_001624 ENSG00000112297 CRYBG1 AIM1|ST4 crystallin beta-gamma domain containing 1 protein-coding chr3-4147 chr3 123295843 123296053 + 7.19 0.000 intron (NM_183357, intron 17 of 20) intron (NM_183357, intron 17 of 20) 94005 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr14-2054 chr14 65462347 65462557 + 7.19 0.000 intron (NM_004480, intron 2 of 9) intron (NM_004480, intron 2 of 9) -8650 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr5-8979 chr5 162200751 162200961 + 7.19 0.000 Intergenic LTR16A|LTR|ERVL 133214 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding chr12-2930 chr12 72271365 72271575 + 7.19 0.000 intron (NR_026836, intron 2 of 2) intron (NR_026836, intron 2 of 2) -1279 NM_013381 29953 Hs.199814 NM_013381 ENSG00000072657 TRHDE PAP-II|PGPEP2|TRH-DE thyrotropin releasing hormone degrading enzyme protein-coding chr1-4365 chr1 120143470 120143680 + 7.19 0.000 Intergenic L2|LINE|L2 32945 NM_004892 9554 Hs.632438 NM_004892 ENSG00000265808 SEC22B ERS-24|SEC22L1 SEC22 homolog B, vesicle trafficking protein (gene/pseudogene) protein-coding chr10-5521 chr10 84510388 84510598 + 7.19 0.000 intron (NM_001351292, intron 11 of 11) L2c|LINE|L2 85324 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr15-3510 chr15 99393387 99393597 + 7.19 0.000 Intergenic L1MB7|LINE|L1 135967 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chrX-4141 chrX 28584862 28585072 + 7.19 0.000 Intergenic Intergenic -2479 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr4-4860 chr4 113052458 113052668 + 7.19 0.000 intron (NM_001354232, intron 1 of 46) intron (NM_001354232, intron 1 of 46) 2910 NM_001148 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr4-6054 chr4 4585536 4585746 + 7.19 0.000 intron (NR_037888, intron 2 of 5) MLT1A0-int|LTR|ERVL-MaLR -43298 NM_001346282 53407 Hs.584913 NM_016930 ENSG00000168818 STX18 Ufe1 syntaxin 18 protein-coding chr17-7022 chr17 58155758 58155968 + 7.19 0.000 exon (NM_012374, exon 1 of 1) exon (NM_012374, exon 1 of 1) 709 NM_012374 26689 Hs.531188 NM_012374 ENSG00000141194 OR4D1 OR17-23|OR4D3|OR4D4P|TPCR16 olfactory receptor family 4 subfamily D member 1 protein-coding chr16-7104 chr16 89481231 89481441 + 7.19 0.000 intron (NM_001256182, intron 1 of 13) AluJr4|SINE|Alu 9225 NR_045839 29123 Hs.335003 NM_013275 ENSG00000167522 ANKRD11 ANCO-1|ANCO1|LZ16|T13 ankyrin repeat domain 11 protein-coding chr18-1176 chr18 21834278 21834488 + 7.19 0.000 intron (NM_020774, intron 12 of 20) L1MC3|LINE|L1 -2977 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA chr3-7931 chr3 151896790 151897000 + 7.19 0.000 intron (NR_110203, intron 1 of 2) intron (NR_110203, intron 1 of 2) 23252 NM_033050 56670 Hs.133181 NM_033050 ENSG00000198829 SUCNR1 GPR91 succinate receptor 1 protein-coding chrX-3592 chrX 79566240 79566450 + 7.19 0.000 Intergenic L1PA11|LINE|L1 -198793 NM_001171581 9452 Hs.17109 NM_004867 ENSG00000078596 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding chr14-2424 chr14 67555579 67555789 + 7.19 0.000 intron (NM_020715, intron 2 of 28) intron (NM_020715, intron 2 of 28) -21834 NM_001348546 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr11-3572 chr11 57432588 57432798 + 7.19 0.000 Intergenic MIR1_Amn|SINE|MIR -5113 NM_017611 29015 Hs.99962 NM_014096 ENSG00000134802 SLC43A3 EEG1|ENBT1|FOAP-13|PRO1659|SEEEG-1 solute carrier family 43 member 3 protein-coding chr2-11739 chr2 11026087 11026297 + 7.19 0.000 Intergenic LTR67B|LTR|ERVL 105984 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr1-16697 chr1 246107643 246107853 + 7.19 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 309664 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr2-8294 chr2 104044045 104044255 + 7.19 0.000 Intergenic Intergenic 364182 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr3-6615 chr3 126558036 126558246 + 7.19 0.000 intron (NR_130715, intron 1 of 5) intron (NR_130715, intron 1 of 5) 791 NR_130715 152065 Hs.178210 NM_152533 ENSG00000180697 C3orf22 - chromosome 3 open reading frame 22 protein-coding chr5-5300 chr5 126377459 126377669 + 7.19 0.000 intron (NM_001146319, intron 1 of 13) Arthur1B|DNA|hAT-Tip100 17444 NM_001146319 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr8-5575 chr8 84037104 84037314 + 7.19 0.000 Intergenic HAL1|LINE|L1 -145578 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr6-5955 chr6 79309064 79309274 + 7.19 0.000 non-coding (NR_130915, exon 3 of 3) non-coding (NR_130915, exon 3 of 3) 4215 NR_130915 80078 NR_130915 ENSG00000286042 LCAL1 onco-lncRNA-27 lung cancer associated lncRNA 1 ncRNA chr8-5245 chr8 129356112 129356322 + 7.19 0.000 intron (NR_130920, intron 3 of 3) intron (NR_130920, intron 3 of 3) -114977 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA chr4-6146 chr4 31168528 31168738 + 7.19 0.000 Intergenic L1MC3|LINE|L1 -2511 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA chr14-3007 chr14 53947594 53947804 + 7.19 0.000 TTS (NR_049843) TTS (NR_049843) 785 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr4-6274 chr4 79129290 79129500 + 7.19 0.000 intron (NR_038342, intron 3 of 5) L1PA13|LINE|L1 157647 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA chr16-4031 chr16 1037720 1037930 + 7.19 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -34931 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr17-5186 chr17 12729148 12729358 + 7.19 0.000 intron (NM_001146312, intron 5 of 13) intron (NM_001146312, intron 5 of 13) -23118 NR_104605 101928418 Hs.620346 NR_104605 ENSG00000227274 LOC101928418 - uncharacterized LOC101928418 ncRNA chr7-5191 chr7 10216644 10216854 + 7.19 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -485927 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chrX-5162 chrX 132311888 132312098 + 7.19 0.000 intron (NR_110410, intron 2 of 2) MER102c|DNA|hAT-Charlie -92513 NR_073150 57826 Hs.119889 NM_021183 ENSG00000123728 RAP2C - RAP2C, member of RAS oncogene family protein-coding chr19-4417 chr19 3826513 3826723 + 7.19 0.000 intron (NM_015174, intron 6 of 18) AluSx|SINE|Alu -24819 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr19-5833 chr19 41701542 41701752 + 7.19 0.000 Intergenic Intergenic -6979 NM_004363 1048 Hs.709196 NM_004363 ENSG00000105388 CEACAM5 CD66e|CEA carcinoembryonic antigen related cell adhesion molecule 5 protein-coding chr2-6788 chr2 47377018 47377228 + 7.19 0.000 promoter-TSS (NR_030286) promoter-TSS (NR_030286) -552 NR_030286 693144 NR_030286 ENSG00000207923 MIR559 MIRN559|hsa-mir-559 microRNA 559 ncRNA chr12-7718 chr12 91512900 91513110 + 7.19 0.000 Intergenic Intergenic -330188 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr7-1681 chr7 129569958 129570168 + 7.19 0.000 Intergenic MLT1F-int|LTR|ERVL-MaLR -41657 NM_001293163 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chrX-788 chrX 48714995 48715205 + 7.19 0.000 Intergenic Intergenic 18366 NM_003173 6839 Hs.522639 NM_003173 ENSG00000101945 SUV39H1 H3-K9-HMTase 1|KMT1A|MG44|SUV39H suppressor of variegation 3-9 homolog 1 protein-coding chr2-6815 chr2 58742454 58742664 + 7.19 0.000 intron (NR_033873, intron 2 of 13) intron (NR_033873, intron 2 of 13) 221806 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr2-11791 chr2 15746969 15747179 + 7.19 0.000 Intergenic MIRc|SINE|MIR 56292 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr4-6507 chr4 159548263 159548473 + 7.19 0.000 Intergenic ERVL-E-int|LTR|ERVL 229416 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr9-8532 chr9 126287358 126287568 + 7.19 0.000 Intergenic L1MEb|LINE|L1 -11548 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr12-7518 chr12 69090550 69090760 + 7.19 0.000 Intergenic Intergenic -127415 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr10-5625 chr10 95549406 95549616 + 7.19 0.000 intron (NM_001290295, intron 1 of 24) L3|LINE|CR1 11860 NM_001290295 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr15-4085 chr15 72859051 72859261 + 7.19 0.000 Intergenic Intergenic -75398 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr7-6144 chr7 124481104 124481314 + 7.19 0.000 Intergenic Intergenic -129113 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr11-7143 chr11 126334715 126334925 + 7.19 0.000 intron (NM_014026, intron 3 of 5) intron (NM_014026, intron 3 of 5) 20767 NR_033839 399972 Hs.585206 NR_033839 GSEC DCPS-AS1|ST3GAL4-AS1 G-quadruplex forming sequence containing lncRNA ncRNA chr3-8396 chr3 100150720 100150930 + 7.19 0.000 intron (NM_001167924, intron 2 of 9) intron (NM_001167924, intron 2 of 9) -34999 NR_028357 644444 Hs.652353 NR_028357 ENSG00000235156 TMEM30CP CDC50C|TMEM30C transmembrane protein 30C, pseudogene pseudo chr22-3294 chr22 49946958 49947168 + 7.19 0.000 Intergenic Intergenic -13709 NM_001001852 415116 Hs.530381 NM_001001852 ENSG00000198355 PIM3 pim-3 Pim-3 proto-oncogene, serine/threonine kinase protein-coding chr19-5239 chr19 42121198 42121408 + 7.19 0.000 intron (NM_001207026, intron 4 of 12) intron (NM_001207026, intron 4 of 12) 11143 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr12-6020 chr12 108286139 108286349 + 7.19 0.000 Intergenic L2b|LINE|L2 34418 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr11-6914 chr11 107899864 107900074 + 7.19 0.000 Intergenic Intergenic -28479 NM_017516 54734 Hs.354906 NM_017516 ENSG00000179331 RAB39A RAB39 RAB39A, member RAS oncogene family protein-coding chr11-6962 chr11 113963693 113963903 + 7.19 0.000 Intergenic L3|LINE|CR1 -11277 NR_046363 3359 Hs.413899 NM_000869 ENSG00000166736 HTR3A 5-HT-3|5-HT3A|5-HT3R|5HT3R|HTR3 5-hydroxytryptamine receptor 3A protein-coding chr13-3239 chr13 30551335 30551545 + 7.19 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) 66147 NM_001370340 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr19-6374 chr19 12712827 12713037 + 7.19 0.000 intron (NM_013433, intron 9 of 24) AluJo|SINE|Alu -6414 NR_002751 26810 NR_002751 ENSG00000209702 SNORD41 RNU41|U41 small nucleolar RNA, C/D box 41 snoRNA chr1-11577 chr1 202251299 202251509 + 7.19 0.000 intron (NM_001017404, intron 4 of 15) intron (NM_001017404, intron 4 of 15) 37249 NM_001017404 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr10-2951 chr10 34809361 34809571 + 7.19 0.000 intron (NM_001184789, intron 1 of 22) L2c|LINE|L2 5830 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr10-6847 chr10 25180789 25180999 + 7.19 0.000 intron (NM_020752, intron 1 of 10) intron (NM_020752, intron 1 of 10) -4618 NR_027333 100128811 Hs.700407 NR_027333 ENSG00000233642 GPR158-AS1 - GPR158 antisense RNA 1 ncRNA chr6-7901 chr6 108823168 108823378 + 7.19 0.000 Intergenic Intergenic -25143 NM_001286609 84071 Hs.645481 NM_032131 ENSG00000118690 ARMC2 SPGF38|bA787I22.1 armadillo repeat containing 2 protein-coding chrX-988 chrX 4048308 4048518 + 7.19 0.000 Intergenic MER4A1_|LTR|ERV1 -127671 NR_146579 729162 Hs.657302 NR_146578 FAM239B - zinc finger protein 839 pseudogene pseudo chr11-8439 chr11 111469199 111469409 + 7.19 0.000 intron (NM_017589, intron 5 of 5) intron (NM_017589, intron 5 of 5) -41298 NR_147706 728196 Hs.363156 NR_147706 ENSG00000286028 LOC728196 - uncharacterized LOC728196 ncRNA chr15-4924 chr15 77752126 77752336 + 7.19 0.000 intron (NM_001301186, intron 2 of 5) intron (NM_001301186, intron 2 of 5) -31480 NM_001301197 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr9-1605 chr9 121718059 121718269 + 7.19 0.000 intron (NM_032552, intron 3 of 16) intron (NM_032552, intron 3 of 16) -24621 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr5-2829 chr5 43857435 43857645 + 7.19 0.000 Intergenic MER21-int|LTR|ERVL -254310 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr4-6214 chr4 55808118 55808328 + 7.19 0.000 Intergenic Intergenic -11780 NM_001351574 644145 Hs.570825 NM_001351574 ENSG00000250821 EXOC1L - exocyst complex component 1 like protein-coding chr5-4640 chr5 34900400 34900610 + 7.19 0.000 TTS (NM_144725) TTS (NM_144725) 14999 NM_002853 5810 Hs.38114 NM_002853 ENSG00000113456 RAD1 HRAD1|REC1 RAD1 checkpoint DNA exonuclease protein-coding chr4-4422 chr4 48489871 48490081 + 7.19 0.000 promoter-TSS (NM_175619) promoter-TSS (NM_175619) -276 NM_175619 326340 Hs.276457 NM_175619 ENSG00000182223 ZAR1 Z3CXXC6 zygote arrest 1 protein-coding chr8-6362 chr8 53078012 53078222 + 7.19 0.000 Intergenic LTR12C|LTR|ERV1 138209 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr3-5519 chr3 196596363 196596573 + 7.19 0.000 Intergenic Intergenic -27794 NM_001345913 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr2-13090 chr2 111852671 111852881 + 7.19 0.000 intron (NM_022662, intron 13 of 47) MER58C|DNA|hAT-Charlie 31417 NM_022662 64682 Hs.436527 NM_022662 ENSG00000153107 ANAPC1 APC1|MCPR|TSG24 anaphase promoting complex subunit 1 protein-coding chr5-6906 chr5 133615195 133615405 + 7.19 0.000 Intergenic Intergenic -2759 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr18-3069 chr18 32180328 32180538 + 7.19 0.000 Intergenic Intergenic -9606 NM_001308171 4225 Hs.194777 NM_005925 ENSG00000141434 MEP1B - meprin A subunit beta protein-coding chr14-2040 chr14 63435849 63436059 + 7.19 0.000 intron (NR_104104, intron 2 of 12) intron (NR_104104, intron 2 of 12) 72284 NM_001282181 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr12-4767 chr12 52820707 52820917 + 7.19 0.000 TTS (NM_175834) TTS (NM_175834) -6696 NM_002272 3851 Hs.654610 NM_002272 ENSG00000170477 KRT4 CK-4|CK4|CYK4|K4|WSN1 keratin 4 protein-coding chr19-5663 chr19 7694716 7694926 + 7.19 0.000 intron (NM_002002, intron 8 of 10) intron (NM_002002, intron 8 of 10) 4658 NM_001207019 2208 Hs.465778 NM_002002 ENSG00000104921 FCER2 BLAST-2|CD23|CD23A|CLEC4J|FCE2|IGEBF Fc fragment of IgE receptor II protein-coding chr2-6150 chr2 236104556 236104766 + 7.19 0.000 intron (NM_001037131, intron 16 of 17) AluSg|SINE|Alu 63725 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr4-8460 chr4 156110108 156110318 + 7.19 0.000 Intergenic MSTD|LTR|ERVL-MaLR -156347 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr9-4759 chr9 132560462 132560672 + 7.19 0.000 intron (NM_207417, intron 6 of 6) intron (NM_207417, intron 6 of 6) -22039 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr8-6760 chr8 91448115 91448325 + 7.19 0.000 Intergenic HAL1|LINE|L1 198901 NM_134266 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chr5-5036 chr5 87151698 87151908 + 7.19 0.000 intron (NR_105018, intron 2 of 3) intron (NR_105018, intron 2 of 3) 31655 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr14-2711 chr14 90419454 90419664 + 7.19 0.000 Intergenic Intergenic 21309 NM_001363670 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAM2|CAM3|CAMB|CAMC|CAMI|CAMIII|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr22-981 chr22 29702390 29702600 + 7.19 0.000 Intergenic Intergenic -17508 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr1-13109 chr1 190904224 190904434 + 7.19 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 279439 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA chr3-9269 chr3 40750315 40750525 + 7.19 0.000 Intergenic Intergenic 225460 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr2-10164 chr2 84621273 84621483 + 7.19 0.000 intron (NM_001370, intron 25 of 76) intron (NM_001370, intron 25 of 76) 104923 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chr10-4624 chr10 120263325 120263535 + 7.19 0.000 Intergenic LTR79|LTR|ERVL 91793 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr14-4259 chr14 104188622 104188832 + 7.19 0.000 Intergenic Intergenic -34857 NR_146613 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr3-4957 chr3 10873539 10873749 + 7.19 0.000 intron (NM_014229, intron 5 of 13) (CCTAT)n|Simple_repeat|Simple_repeat 57416 NM_001317406 6538 Hs.655078 NM_014229 ENSG00000132164 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 member 11 protein-coding chr18-3322 chr18 56196575 56196785 + 7.19 0.000 Intergenic UCON14|DNA?|DNA? -5418 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr22-3361 chr22 27193470 27193680 + 7.19 0.000 Intergenic MIRc|SINE|MIR 6059 NM_001318392 105372977 Hs.743180 NM_001318392 LOC105372977 - uncharacterized LOC105372977 protein-coding chr11-4919 chr11 64410919 64411129 + 7.19 0.000 Intergenic L2a|LINE|L2 -38033 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr1-7434 chr1 45590760 45590970 + 7.19 0.000 intron (NM_002482, intron 1 of 14) intron (NM_002482, intron 1 of 14) 6824 NM_152298 4678 Hs.319334 NM_002482 ENSG00000132780 NASP FLB7527|HMDRA1|PRO1999 nuclear autoantigenic sperm protein protein-coding chr12-3203 chr12 54390134 54390344 + 7.19 0.000 intron (NM_001130968, intron 1 of 6) intron (NM_001130968, intron 1 of 6) 1059 NM_001130968 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr4-3257 chr4 91809712 91809922 + 7.19 0.000 Intergenic THE1C|LTR|ERVL-MaLR 467485 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr1-9665 chr1 48436701 48436911 + 7.19 0.000 intron (NM_019073, intron 3 of 12) intron (NM_019073, intron 3 of 12) 35398 NM_001286238 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr22-3710 chr22 25092836 25093046 + 7.19 0.000 intron (NM_001145206, intron 4 of 10) intron (NM_001145206, intron 4 of 10) 19751 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr3-7099 chr3 181434530 181434740 + 7.19 0.000 intron (NR_125407, intron 3 of 4) intron (NR_125407, intron 3 of 4) 7851 NR_125407 102724604 Hs.570524 NR_125407 ENSG00000241231 LOC102724604 - uncharacterized LOC102724604 ncRNA chr8-7198 chr8 125349104 125349314 + 7.19 0.000 intron (NM_001349486, intron 5 of 7) intron (NM_001349486, intron 5 of 7) -81149 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr3-6158 chr3 57647710 57647920 + 7.19 0.000 intron (NM_152678, intron 9 of 19) intron (NM_152678, intron 9 of 19) 45262 NM_152678 201627 Hs.91085 NM_152678 ENSG00000174839 DENND6A AFI1A|FAM116A DENN domain containing 6A protein-coding chr13-3345 chr13 72546974 72547184 + 7.19 0.000 Intergenic Intergenic 180550 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr8-3875 chr8 37915323 37915533 + 7.19 0.000 Intergenic Intergenic -15931 NM_025151 80223 Hs.191179 NM_025151 ENSG00000156675 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 protein-coding chr8-7349 chr8 135048648 135048858 + 7.19 0.000 Intergenic Intergenic -185378 NR_120396 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA chr5-1334 chr5 140241404 140241614 + 7.19 0.000 intron (NM_032412, intron 2 of 2) intron (NM_032412, intron 2 of 2) 61592 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr19-5692 chr19 10799810 10800020 + 7.19 0.000 intron (NM_001005362, intron 11 of 19) intron (NM_001005362, intron 11 of 19) 17581 NR_029586 406976 NR_029586 ENSG00000207752 MIR199A1 MIR-199-s|MIRN199A1|mir-199a-1 microRNA 199a-1 ncRNA chr11-5115 chr11 124339963 124340173 + 7.19 0.000 Intergenic Intergenic -19871 NM_001002918 283160 Hs.504212 NM_001002918 ENSG00000279116 OR8D2 JCG2 olfactory receptor family 8 subfamily D member 2 (gene/pseudogene) protein-coding chr10-6086 chr10 131315040 131315250 + 7.19 0.000 Intergenic Intergenic -3424 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr1-11388 chr1 47916330 47916540 + 7.19 0.000 intron (NM_001194986, intron 2 of 6) L2c|LINE|L2 80950 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr7-6823 chr7 38163645 38163855 + 7.19 0.000 Intergenic LTR22A|LTR|ERVK -14495 NM_001363347 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr15-4163 chr15 91634405 91634615 + 7.19 0.000 Intergenic MIRb|SINE|MIR 171171 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr6-4295 chr6 14117724 14117934 + 7.19 0.000 promoter-TSS (NM_004233) promoter-TSS (NM_004233) 57 NM_004233 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr3-9944 chr3 89818319 89818529 + 7.19 0.000 Intergenic MER52A|LTR|ERV1 710803 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr11-7837 chr11 113907930 113908140 + 7.19 0.000 promoter-TSS (NM_001363563) promoter-TSS (NM_001363563) -806 NM_001363563 9177 Hs.241377 NM_006028 ENSG00000149305 HTR3B 5-HT3B 5-hydroxytryptamine receptor 3B protein-coding chr11-5659 chr11 126891479 126891689 + 7.19 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -49162 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr12-2094 chr12 47765441 47765651 + 7.19 0.000 Intergenic Intergenic -6666 NM_001098531 10411 Hs.8578 NM_006105 ENSG00000079337 RAPGEF3 CAMP-GEFI|EPAC|EPAC1|HSU79275|bcm910 Rap guanine nucleotide exchange factor 3 protein-coding chr6-8344 chr6 147744759 147744969 + 7.19 0.000 Intergenic AluSx|SINE|Alu 236174 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr4-7177 chr4 40395708 40395918 + 7.19 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 60480 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chr2-13697 chr2 165523328 165523538 + 7.19 0.000 intron (NM_001172173, intron 3 of 6) L2|LINE|L2 -48903 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr12-6366 chr12 62931108 62931318 + 7.19 0.000 intron (NM_020700, intron 1 of 9) intron (NM_020700, intron 1 of 9) 3937 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr1-12746 chr1 64540703 64540913 + 7.19 0.000 intron (NM_001293274, intron 1 of 25) intron (NM_001293274, intron 1 of 25) 34894 NM_001293274 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr10-5310 chr10 70500276 70500486 + 7.19 0.000 intron (NM_014431, intron 1 of 19) intron (NM_014431, intron 1 of 19) 21614 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr3-9200 chr3 36814332 36814542 + 7.19 0.000 Intergenic Intergenic 8063 NR_147141 105377031 Hs.333862 NR_147141 ENSG00000279727 LINC02033 - long intergenic non-protein coding RNA 2033 ncRNA chr1-15527 chr1 156937686 156937896 + 7.19 0.000 intron (NM_014784, intron 37 of 39) intron (NM_014784, intron 37 of 39) -1547 NR_030527 768220 NR_030527 ENSG00000211581 MIR765 MIRN765|hsa-mir-765|mir-765 microRNA 765 ncRNA chrX-4321 chrX 45151176 45151386 + 7.19 0.000 3' UTR (NM_176819, exon 5 of 5) 3' UTR (NM_176819, exon 5 of 5) 49595 NM_176819 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr6-6600 chr6 145423599 145423809 + 7.19 0.000 Intergenic Intergenic 263173 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr3-4581 chr3 183519020 183519230 + 7.19 0.000 intron (NM_130446, intron 2 of 6) MamGypLTR2b|LTR|Gypsy -29610 NR_046687 100874019 NR_046687 ENSG00000242522 KLHL6-AS1 - KLHL6 antisense RNA 1 ncRNA chr7-8319 chr7 41809563 41809773 + 7.19 0.000 Intergenic Intergenic -106578 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr10-7496 chr10 12116516 12116726 + 7.19 0.000 intron (NM_018706, intron 13 of 16) AluSx|SINE|Alu -13020 NM_001142628 55176 Hs.112955 NM_018144 ENSG00000065665 SEC61A2 - SEC61 translocon alpha 2 subunit protein-coding chr3-6694 chr3 132268354 132268564 + 7.19 0.000 Intergenic Intergenic -48948 NM_001099 55 Hs.433060 NM_001099 ENSG00000014257 ACPP 5'-NT|ACP-3|ACP3 acid phosphatase, prostate protein-coding chr11-7600 chr11 43694497 43694707 + 7.19 0.000 intron (NM_016142, intron 1 of 10) AluJo|SINE|Alu 13864 NM_016142 51144 Hs.132513 NM_016142 ENSG00000149084 HSD17B12 KAR|SDR12C1 hydroxysteroid 17-beta dehydrogenase 12 protein-coding chr1-10961 chr1 213617417 213617627 + 7.19 0.000 Intergenic Intergenic -307227 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr10-3979 chr10 122075133 122075343 + 7.19 0.000 intron (NM_206861, intron 3 of 19) intron (NM_206861, intron 3 of 19) -37647 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr3-4465 chr3 46883286 46883496 + 7.19 0.000 intron (NM_001184744, intron 1 of 14) CpG 1142 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr9-4446 chr9 19386775 19386985 + 7.19 0.000 Intergenic Intergenic -6644 NM_001010 6194 Hs.408073 NM_001010 ENSG00000137154 RPS6 S6 ribosomal protein S6 protein-coding chrX-4903 chrX 107883348 107883558 + 7.19 0.000 intron (NM_052817, intron 3 of 9) L1MC5a|LINE|L1 52527 NR_110395 101928335 Hs.657090 NR_110395 ENSG00000236064 LOC101928335 - uncharacterized LOC101928335 ncRNA chr13-1936 chr13 87607418 87607628 + 7.19 0.000 intron (NR_033829, intron 1 of 5) intron (NR_033829, intron 1 of 5) 11217 NR_039722 100616182 NR_039722 ENSG00000266052 MIR4500 - microRNA 4500 ncRNA chr12-5028 chr12 85125875 85126085 + 7.19 0.000 intron (NM_001079910, intron 17 of 26) intron (NM_001079910, intron 17 of 26) 89629 NM_001079910 84125 Hs.402200 NM_032165 ENSG00000133640 LRRIQ1 - leucine rich repeats and IQ motif containing 1 protein-coding chr3-8509 chr3 132804700 132804910 + 7.19 0.000 intron (NR_002811, intron 5 of 10) Tigger19a|DNA|TcMar-Tigger -82346 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr10-6064 chr10 129447874 129448084 + 7.19 0.000 Intergenic AluSx1|SINE|Alu -19262 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr17-5616 chr17 48929365 48929575 + 7.19 0.000 TTS (NM_023079) TTS (NM_023079) 15372 NM_001317192 11267 Hs.127249 NM_007241 ENSG00000159210 SNF8 Dot3|EAP30|VPS22 SNF8 subunit of ESCRT-II protein-coding chr12-6697 chr12 4414870 4415080 + 7.19 0.000 Intergenic Intergenic 30639 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr4-2548 chr4 76970509 76970719 + 7.19 0.000 intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 20862 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr9-7012 chr9 115931827 115932037 + 7.19 0.000 Intergenic Intergenic -6725 NR_024032 58483 Hs.23367 NR_024032 ENSG00000204148 LINC00474 C9orf27|EST-YD1 long intergenic non-protein coding RNA 474 ncRNA chr1-16389 chr1 223025224 223025434 + 7.19 0.000 Intergenic HERVH-int|LTR|ERV1 96905 NM_001369594 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr5-7471 chr5 33212280 33212490 + 7.19 0.000 Intergenic Intergenic -17350 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr1-14748 chr1 67468574 67468784 + 7.19 0.000 Intergenic MIR|SINE|MIR -38277 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr7-7290 chr7 39085872 39086082 + 7.19 0.000 exon (NM_001166018, exon 3 of 11) exon (NM_001166018, exon 3 of 11) -72410 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr16-6485 chr16 58452010 58452220 + 7.19 0.000 Intergenic MER34A1|LTR|ERV1 -11530 NM_020465 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr12-5171 chr12 103543258 103543468 + 7.19 0.000 Intergenic AluJo|SINE|Alu -4431 NR_110103 101929084 Hs.440981 NR_110103 ENSG00000257762 LINC02401 - long intergenic non-protein coding RNA 2401 ncRNA chr18-1913 chr18 33410759 33410969 + 7.19 0.000 intron (NM_001308126, intron 3 of 23) MLT1H|LTR|ERVL-MaLR 29707 NM_001371121 chr8-5968 chr8 21049589 21049799 + 7.19 0.000 Intergenic Intergenic 75708 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LINC02153 - long intergenic non-protein coding RNA 2153 ncRNA chr12-4392 chr12 5871188 5871398 + 7.19 0.000 intron (NM_001278596, intron 3 of 25) intron (NM_001278596, intron 3 of 25) 73966 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr11-5584 chr11 108297013 108297223 + 7.19 0.000 intron (NM_001351834, intron 33 of 63) intron (NM_001351834, intron 33 of 63) 73589 NM_001351836 472 Hs.367437 NM_000051 ENSG00000149311 ATM AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1 ATM serine/threonine kinase protein-coding chr11-7568 chr11 27389129 27389339 + 7.19 0.000 intron (NM_018490, intron 4 of 17) intron (NM_018490, intron 4 of 17) -25986 NM_080654 91057 Hs.143733 NM_030771 ENSG00000109881 CCDC34 L15|NY-REN-41|RAMA3 coiled-coil domain containing 34 protein-coding chr4-4439 chr4 52853533 52853743 + 7.19 0.000 Intergenic Intergenic -8679 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr15-2565 chr15 53663303 53663513 + 7.19 0.000 intron (NM_182758, intron 14 of 19) intron (NM_182758, intron 14 of 19) 96255 NM_182758 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr6-7431 chr6 53785777 53785987 + 7.19 0.000 Intergenic AluSz|SINE|Alu -9123 NM_018214 55227 Hs.606493 NM_018214 ENSG00000137269 LRRC1 LANO|dJ523E19.1 leucine rich repeat containing 1 protein-coding chr1-12080 chr1 154058216 154058426 + 7.19 0.000 intron (NM_001159484, intron 21 of 37) intron (NM_001159484, intron 21 of 37) 46271 NR_049883 100847024 NR_049883 ENSG00000263987 MIR5698 - microRNA 5698 ncRNA chrX-4041 chrX 17969000 17969210 + 7.19 0.000 Intergenic Intergenic -107768 NM_001172743 10742 Hs.446680 NM_021785 ENSG00000131831 RAI2 - retinoic acid induced 2 protein-coding chr2-12027 chr2 29097054 29097264 + 7.19 0.000 promoter-TSS (NM_001287528) promoter-TSS (NM_001287528) -517 NM_001287528 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr18-3254 chr18 49869600 49869810 + 7.19 0.000 intron (NM_001080467, intron 27 of 39) intron (NM_001080467, intron 27 of 39) 55682 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr3-7553 chr3 193973015 193973225 + 7.19 0.000 intron (NR_033944, intron 1 of 2) MIR3|SINE|MIR 21118 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo chrX-1634 chrX 123184266 123184476 + 7.19 0.000 promoter-TSS (NM_007325) promoter-TSS (NM_007325) 93 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr1-7968 chr1 197146163 197146373 + 7.19 0.000 exon (NM_018136, exon 1 of 28) exon (NM_018136, exon 1 of 28) 401 NM_018136 259266 Hs.121028 NM_018136 ENSG00000066279 ASPM ASP|Calmbp1|MCPH5 abnormal spindle microtubule assembly protein-coding chr22-3504 chr22 47259356 47259566 + 7.19 0.000 Intergenic Intergenic -86110 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr22-1881 chr22 43351243 43351453 + 7.19 0.000 Intergenic MIRb|SINE|MIR -7976 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr20-4371 chr20 56891138 56891348 + 7.19 0.000 Intergenic L1MC3|LINE|L1 261937 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr7-5239 chr7 16895409 16895619 + 7.19 0.000 Intergenic L1PA13|LINE|L1 -13531 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr7-9050 chr7 103284253 103284463 + 7.19 0.000 Intergenic Intergenic -3892 NR_027768 349152 Hs.732579 NM_182634 ENSG00000170629 DPY19L2P2 - DPY19L2 pseudogene 2 pseudo chr6-6868 chr6 10347844 10348054 + 7.19 0.000 Intergenic Intergenic -56553 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr1-10288 chr1 150066752 150066962 + 7.19 0.000 promoter-TSS (NM_001279354) promoter-TSS (NM_001279354) -525 NM_001279353 11311 Hs.443750 NM_007259 ENSG00000136631 VPS45 H1|H1VPS45|SCN5|VPS45A|VPS45B|VPS54A|VSP45|VSP45A vacuolar protein sorting 45 homolog protein-coding chr5-3619 chr5 133052590 133052800 + 7.19 0.000 intron (NM_002154, intron 1 of 18) L2b|LINE|L2 682 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chrX-3870 chrX 3699131 3699341 + 7.19 0.000 intron (NM_005044, intron 1 of 8) AluSx3|SINE|Alu 14413 NM_005044 5613 Hs.390788 NM_005044 ENSG00000183943 PRKX PKX1 protein kinase X-linked protein-coding chr1-6640 chr1 44482226 44482436 + 7.19 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 58330 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr11-8653 chr11 3390432 3390642 + 7.19 0.000 TTS (NR_044999) TTS (NR_044999) 1378 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr3-7281 chr3 197848225 197848435 + 7.19 0.000 intron (NM_001365717, intron 12 of 19) MIRc|SINE|MIR 57076 NM_001365715 84859 Hs.518414 NM_032773 ENSG00000186001 LRCH3 - leucine rich repeats and calponin homology domain containing 3 protein-coding chr22-1154 chr22 48945869 48946079 + 7.19 0.000 Intergenic Intergenic 79204 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr20-4313 chr20 51556556 51556766 + 7.19 0.000 intron (NM_001258292, intron 1 of 9) intron (NM_001258292, intron 1 of 9) 6178 NM_001258292 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr4-6778 chr4 6907795 6908005 + 7.19 0.000 Intergenic Intergenic -1544 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr18-3486 chr18 72410001 72410211 + 7.19 0.000 Intergenic Intergenic 134236 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chrX-3265 chrX 86925358 86925568 + 7.19 0.000 Intergenic AluSz6|SINE|Alu -592339 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr11-5828 chr11 8245232 8245442 + 7.19 0.000 intron (NM_001270428, intron 1 of 3) MIRc|SINE|MIR 18541 NR_073006 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr10-3630 chr10 96960134 96960344 + 7.19 0.000 3' UTR (NM_032440, exon 8 of 8) 3' UTR (NM_032440, exon 8 of 8) 127294 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr12-4198 chr12 97158664 97158874 + 7.19 0.000 Intergenic Intergenic 251303 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr13-3131 chr13 80399238 80399448 + 7.19 0.000 Intergenic HERVK3-int|LTR|ERVK -58217 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr1-16186 chr1 206883356 206883566 + 7.07 0.000 Intergenic L1MB7|LINE|L1 -13982 NM_001185156 11009 Hs.58831 NM_006850 ENSG00000162892 IL24 C49A|FISP|IL10B|MDA7|MOB5|ST16 interleukin 24 protein-coding chr2-11574 chr2 1051143 1051353 + 7.07 0.000 intron (NM_018968, intron 1 of 16) L1M5|LINE|L1 -99856 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr11-8301 chr11 73829852 73830062 + 7.07 0.000 intron (NM_001318500, intron 4 of 5) AluSz6|SINE|Alu 42083 NM_001318498 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr4-8766 chr4 187739539 187739749 + 7.07 0.000 Intergenic L1PA15-16|LINE|L1 -67003 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LINC02492 - long intergenic non-protein coding RNA 2492 ncRNA chr1-12828 chr1 89409633 89409843 + 7.07 0.000 intron (NR_003133, intron 1 of 4) LTR76|LTR|ERV1 2059 NR_003133 400759 Hs.661968 NR_003133 ENSG00000225492 GBP1P1 - guanylate binding protein 1 pseudogene 1 pseudo chr1-15718 chr1 170321281 170321491 + 7.07 0.000 Intergenic Intergenic -37178 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr19-6621 chr19 30312677 30312887 + 7.07 0.000 Intergenic MIRc|SINE|MIR -59602 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr4-5863 chr4 121603773 121603983 + 7.07 0.000 Intergenic L1ME3D|LINE|L1 93102 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr3-10030 chr3 103212446 103212656 + 7.07 0.000 Intergenic HERVK9-int|LTR|ERVK 311565 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr16-4237 chr16 19386346 19386556 + 7.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR -24088 NM_001308161 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr8-5980 chr8 21895461 21895671 + 7.07 0.000 Intergenic AluSc8|SINE|Alu 18124 NM_003974 9046 Hs.71215 NM_003974 ENSG00000147443 DOK2 p56DOK|p56dok-2 docking protein 2 protein-coding chr16-6769 chr16 76947025 76947235 + 7.07 0.000 Intergenic Intergenic 78194 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr8-3088 chr8 27512600 27512810 + 7.07 0.000 intron (NM_001979, intron 6 of 18) MIRb|SINE|MIR 21562 NM_001256482 2053 Hs.212088 NM_001979 ENSG00000120915 EPHX2 ABHD20|CEH|SEH epoxide hydrolase 2 protein-coding chr10-7571 chr10 17540904 17541114 + 7.07 0.000 Intergenic Intergenic 76365 NM_014241 9200 Hs.114062 NM_014241 ENSG00000165996 HACD1 CAP|PTPLA 3-hydroxyacyl-CoA dehydratase 1 protein-coding chr7-4266 chr7 4825899 4826109 + 7.07 0.000 intron (NM_018059, intron 5 of 14) AluJb|SINE|Alu 11446 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr7-7945 chr7 10767779 10767989 + 7.07 0.000 intron (NR_147499, intron 1 of 2) intron (NR_147499, intron 1 of 2) 12060 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA chr12-3397 chr12 104342992 104343202 + 7.07 0.000 intron (NM_001093771, intron 16 of 16) intron (NM_001093771, intron 16 of 16) 39358 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr19-6756 chr19 39380675 39380885 + 7.07 0.000 exon (NM_001303614, exon 10 of 13) exon (NM_001303614, exon 10 of 13) 10326 NM_019088 54623 Hs.466714 NM_019088 ENSG00000006712 PAF1 F23149_1|PD2 PAF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr3-4177 chr3 127009287 127009497 + 7.07 0.000 intron (NM_032242, intron 8 of 30) G-rich|Low_complexity|Low_complexity 20798 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr22-2636 chr22 33658250 33658460 + 7.07 0.000 intron (NM_133642, intron 2 of 14) L1PA10|LINE|L1 46565 NR_145833 109616998 NR_145833 ENSG00000253007 SNORA50B - small nucleolar RNA, H/ACA box 50B snoRNA chr22-2721 chr22 38482408 38482618 + 7.07 0.000 TTS (NM_001098504) TTS (NM_001098504) 14417 NM_006855 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr2-6447 chr2 157782139 157782349 + 7.07 0.000 intron (NM_001111067, intron 3 of 10) intron (NM_001111067, intron 3 of 10) 56386 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr1-3410 chr1 236051576 236051786 + 7.07 0.000 intron (NM_002508, intron 1 of 19) intron (NM_002508, intron 1 of 19) 13409 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chrX-3618 chrX 85957259 85957469 + 7.07 0.000 intron (NM_001320959, intron 7 of 14) MIR1_Amn|SINE|MIR -53657 NR_029848 494323 NR_029848 ENSG00000199051 MIR361 MIRN361|hsa-mir-361|mir-361 microRNA 361 ncRNA chr5-6176 chr5 57835401 57835611 + 7.07 0.000 Intergenic Intergenic 63656 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr3-2894 chr3 49081594 49081804 + 7.07 0.000 intron (NM_001320584, intron 1 of 9) AluJb|SINE|Alu 11933 NM_001320582 54870 Hs.297389 NM_017730 ENSG00000198218 QRICH1 AB-DIP|VERBRAS glutamine rich 1 protein-coding chr2-12499 chr2 63140177 63140387 + 7.07 0.000 intron (NR_148704, intron 18 of 18) L1PB1|LINE|L1 -20740 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr2-7916 chr2 58353067 58353277 + 7.07 0.000 Intergenic Intergenic 77295 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA chr11-10181 chr11 94401885 94402095 + 7.07 0.000 promoter-TSS (NM_001330345) promoter-TSS (NM_001330345) -571 NM_016540 10888 Hs.272385 NM_016540 ENSG00000123901 GPR83 GIR|GPR72 G protein-coupled receptor 83 protein-coding chr22-3255 chr22 45112126 45112336 + 7.07 0.000 Intergenic Intergenic 40353 NR_038957 100506714 Hs.189902 NR_038956 NUP50-DT NUP50-AS1 NUP50 divergent transcript ncRNA chr9-7602 chr9 36924021 36924231 + 7.07 0.000 intron (NM_001280548, intron 6 of 8) intron (NM_001280548, intron 6 of 8) -30595 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr12-8183 chr12 122416553 122416763 + 7.07 0.000 intron (NM_198240, intron 1 of 23) AluSq2|SINE|Alu 5911 NM_002956 6249 Hs.524809 NM_002956 ENSG00000130779 CLIP1 CLIP|CLIP-170|CLIP170|CYLN1|RSN CAP-Gly domain containing linker protein 1 protein-coding chr11-9918 chr11 75514611 75514821 + 7.07 0.000 intron (NM_030792, intron 1 of 16) Plat_L3|LINE|CR1 10857 NM_001351168 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr15-4410 chr15 44145147 44145357 + 7.07 0.000 intron (NM_001286490, intron 1 of 15) intron (NM_001286490, intron 1 of 15) 49194 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr14-4015 chr14 42543151 42543361 + 7.07 0.000 Intergenic L1MA9|LINE|L1 936400 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr11-10280 chr11 104078295 104078505 + 7.07 0.000 intron (NM_025208, intron 1 of 6) LTR81C|LTR|Gypsy 41760 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr6-2926 chr6 22836797 22837007 + 7.07 0.000 Intergenic Intergenic -118978 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr18-2654 chr18 47769823 47770033 + 7.07 0.000 Intergenic L1ME3E|LINE|L1 160731 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr18-3563 chr18 78017314 78017524 + 7.07 0.000 Intergenic Intergenic -23692 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr4-6736 chr4 4730169 4730379 + 7.07 0.000 Intergenic Intergenic -31486 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr3-7636 chr3 27363812 27364022 + 7.07 0.000 intron (NM_152534, intron 2 of 38) MIRc|SINE|MIR 5466 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr1-14124 chr1 31543507 31543717 + 7.07 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 25177 NR_027085 284551 Hs.658659 NR_027085 LINC01226 - long intergenic non-protein coding RNA 1226 ncRNA chr1-8910 chr1 6455064 6455274 + 7.07 0.000 intron (NM_031475, intron 10 of 12) CpG 11026 NM_148965 8718 Hs.462529 NM_003790 ENSG00000215788 TNFRSF25 APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR TNF receptor superfamily member 25 protein-coding chr7-7090 chr7 157109366 157109576 + 7.07 0.000 Intergenic Intergenic -29455 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr7-7322 chr7 45591048 45591258 + 7.07 0.000 intron (NM_001281768, intron 2 of 9) intron (NM_001281768, intron 2 of 9) 16785 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr18-2738 chr18 75574403 75574613 + 7.07 0.000 Intergenic HERV16-int|LTR|ERVL 137895 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chrX-2265 chrX 48287000 48287210 + 7.07 0.000 Intergenic Intergenic 19074 NR_073393 280660 Hs.553667 NM_174962 ENSG00000204648 SSX9P SSX9 SSX family member 9, pseudogene pseudo chr8-3279 chr8 20079087 20079297 + 7.07 0.000 Intergenic MER44C|DNA|TcMar-Tigger 103944 NM_003053 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr1-14672 chr1 60733265 60733475 + 7.07 0.000 intron (NR_110628, intron 2 of 5) intron (NR_110628, intron 2 of 5) 92214 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr19-3858 chr19 18537513 18537723 + 7.07 0.000 exon (NM_001308373, exon 6 of 9) exon (NM_001308373, exon 6 of 9) 5955 NM_001308373 23770 Hs.173464 NM_012181 ENSG00000105701 FKBP8 FKBP38|FKBPr38 FKBP prolyl isomerase 8 protein-coding chr20-2252 chr20 2533101 2533311 + 7.07 0.000 Intergenic LTR16A1|LTR|ERVL -3401 NM_080751 117532 Hs.352626 NM_080751 ENSG00000149488 TMC2 C20orf145 transmembrane channel like 2 protein-coding chr10-5500 chr10 81680227 81680437 + 7.07 0.000 Intergenic LTR8|LTR|ERV1 -194862 NM_001370083 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr3-7220 chr3 193853514 193853724 + 7.07 0.000 Intergenic Intergenic -9610 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr19-6258 chr19 7497339 7497549 + 7.07 0.000 promoter-TSS (NM_198534) promoter-TSS (NM_198534) -104 NM_198534 374877 Hs.631862 NM_198534 ENSG00000198723 TEX45 C19orf45 testis expressed 45 protein-coding chr21-1765 chr21 36108019 36108229 + 7.07 0.000 non-coding (NR_147887, exon 2 of 2) non-coding (NR_147887, exon 2 of 2) 3243 NR_147887 105369306 NR_147887 ENSG00000233393 LOC105369306 - uncharacterized LOC105369306 ncRNA chr5-3924 chr5 173907715 173907925 + 7.07 0.000 intron (NM_001308192, intron 1 of 8) intron (NM_001308192, intron 1 of 8) 14769 NM_001308192 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr1-9933 chr1 76379608 76379818 + 7.07 0.000 intron (NM_001349111, intron 3 of 5) intron (NM_001349111, intron 3 of 5) 304967 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr18-2341 chr18 22807073 22807283 + 7.07 0.000 Intergenic Intergenic -20341 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr21-1658 chr21 26098898 26099108 + 7.07 0.000 intron (NM_001136129, intron 1 of 14) L1MC5|LINE|L1 41387 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr1-10177 chr1 110452745 110452955 + 7.07 0.000 intron (NM_032414, intron 1 of 2) intron (NM_032414, intron 1 of 2) 1701 NM_032414 84432 Hs.514793 NM_032414 ENSG00000143125 PROK1 EGVEGF|PK1|PRK1 prokineticin 1 protein-coding chr18-2228 chr18 67892148 67892358 + 7.07 0.000 intron (NR_033921, intron 4 of 4) L2|LINE|L2 -77431 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr8-4217 chr8 86164413 86164623 + 7.07 0.000 Intergenic L2a|LINE|L2 65608 NM_152565 245972 Hs.436360 NM_152565 ENSG00000147614 ATP6V0D2 ATP6D2|VMA6 ATPase H+ transporting V0 subunit d2 protein-coding chr8-3914 chr8 41632171 41632381 + 7.07 0.000 Intergenic Intergenic 15083 NM_152568 157848 NM_152568 ENSG00000165066 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding chr2-6184 chr2 6514607 6514817 + 7.07 0.000 Intergenic AluSz6|SINE|Alu 119075 NR_110500 102800315 Hs.729713 NR_110498 ENSG00000236172 LINC01246 - long intergenic non-protein coding RNA 1246 ncRNA chr9-7747 chr9 75588885 75589095 + 7.07 0.000 Intergenic Intergenic -301654 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr3-3407 chr3 80310196 80310406 + 7.07 0.000 Intergenic HERV30-int|LTR|ERV1 -454596 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr20-2135 chr20 36046184 36046394 + 7.07 0.000 non-coding (NR_027451, exon 1 of 1) non-coding (NR_027451, exon 1 of 1) 4671 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr19-4499 chr19 6102572 6102782 + 7.07 0.000 intron (NM_000635, intron 1 of 17) L2a|LINE|L2 7823 NM_134433 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr9-7427 chr9 23449141 23449351 + 7.07 0.000 Intergenic Intergenic 223153 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr10-6727 chr10 126806680 126806890 + 7.07 0.000 Intergenic MIR|SINE|MIR -98624 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr19-6444 chr19 16171086 16171296 + 7.07 0.000 intron (NM_054113, intron 2 of 5) (AGAA)n|Simple_repeat|Simple_repeat 2334 NM_001300922 117286 Hs.255432 NM_054113 ENSG00000141977 CIB3 KIP3 calcium and integrin binding family member 3 protein-coding chr21-284 chr21 34702501 34702711 + 7.07 0.000 intron (NM_053277, intron 1 of 5) intron (NM_053277, intron 1 of 5) 33612 NM_001317009 54102 Hs.473695 NM_053277 ENSG00000159212 CLIC6 CLIC1L chloride intracellular channel 6 protein-coding chr10-5730 chr10 101289104 101289314 + 7.07 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -25659 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr8-5404 chr8 27603173 27603383 + 7.07 0.000 intron (NM_001831, intron 6 of 8) intron (NM_001831, intron 6 of 8) 7473 NR_106902 102465508 NR_106902 ENSG00000284280 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA chr11-6685 chr11 77052882 77053092 + 7.07 0.000 Intergenic L1ME5|LINE|L1 -13984 NM_004055 726 Hs.248153 NM_004055 ENSG00000149260 CAPN5 ADNIV|HTRA3|VRNI|nCL-3 calpain 5 protein-coding chr1-14158 chr1 32488145 32488355 + 7.07 0.000 3' UTR (NM_001145720, exon 4 of 4) 3' UTR (NM_001145720, exon 4 of 4) 23178 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr5-4442 chr5 2887977 2888187 + 7.07 0.000 Intergenic Intergenic -29772 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA chr11-10188 chr11 95446148 95446358 + 7.07 0.000 Intergenic MER52A|LTR|ERV1 -213778 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr12-5427 chr12 122456570 122456780 + 7.07 0.000 Intergenic AluJo|SINE|Alu -34006 NM_198240 6249 Hs.524809 NM_002956 ENSG00000130779 CLIP1 CLIP|CLIP-170|CLIP170|CYLN1|RSN CAP-Gly domain containing linker protein 1 protein-coding chrX-1496 chrX 154090120 154090330 + 7.07 0.000 intron (NM_001316337, intron 2 of 4) AluSx|SINE|Alu 6744 NM_001369394 4204 Hs.200716 NM_004992 ENSG00000169057 MECP2 AUTSX3|MRX16|MRX79|MRXS13|MRXSL|PPMX|RS|RTS|RTT methyl-CpG binding protein 2 protein-coding chr5-4374 chr5 172559718 172559928 + 7.07 0.000 promoter-TSS (NR_146726) promoter-TSS (NR_146726) -809 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr2-14034 chr2 194122184 194122394 + 7.07 0.000 Intergenic L1M1|LINE|L1 -221980 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr19-5428 chr19 18782642 18782852 + 7.07 0.000 TTS (NM_001098482) TTS (NM_001098482) 8558 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr22-2670 chr22 36473939 36474149 + 7.07 0.000 intron (NM_012473, intron 3 of 3) intron (NM_012473, intron 3 of 3) 7596 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr12-6428 chr12 83199020 83199230 + 7.07 0.000 Intergenic Intergenic 511970 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr7-7608 chr7 131950224 131950434 + 7.07 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 40109 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr7-4447 chr7 128854007 128854217 + 7.07 0.000 exon (NM_001458, exon 40 of 48) exon (NM_001458, exon 40 of 48) 8514 NR_149055 110806300 Hs.735929 NR_149055 ENSG00000242902 FLNC-AS1 - FLNC antisense RNA 1 ncRNA chr4-6975 chr4 21402966 21403176 + 7.07 0.000 intron (NM_147182, intron 2 of 8) L2a|LINE|L2 61687 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr11-3718 chr11 14242786 14242996 + 7.07 0.000 intron (NM_006108, intron 6 of 15) intron (NM_006108, intron 6 of 15) 115594 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr16-2861 chr16 86809567 86809777 + 7.07 0.000 Intergenic MER5B|DNA|hAT-Charlie 87581 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr6-8396 chr6 150432851 150433061 + 7.07 0.000 Intergenic Intergenic 63944 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr8-5870 chr8 14834363 14834573 + 7.07 0.000 intron (NM_139167, intron 1 of 7) MLT1I|LTR|ERVL-MaLR 19042 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr5-2994 chr5 1274618 1274828 + 7.07 0.000 intron (NM_198253, intron 6 of 15) MER1B|DNA|hAT-Charlie 20324 NM_198253 7015 Hs.492203 NM_198253 ENSG00000164362 TERT CMM9|DKCA2|DKCB4|EST2|PFBMFT1|TCS1|TP2|TRT|hEST2|hTRT telomerase reverse transcriptase protein-coding chr2-4586 chr2 98308491 98308701 + 7.07 0.000 intron (NM_001345864, intron 20 of 21) intron (NM_001345864, intron 20 of 21) -37559 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr4-7647 chr4 84375637 84375847 + 7.07 0.000 Intergenic Intergenic -76573 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr2-6582 chr2 228767258 228767468 + 7.07 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -155968 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr2-8227 chr2 96626481 96626691 + 7.07 0.000 intron (NR_047654, intron 3 of 20) intron (NR_047654, intron 3 of 20) 11405 NR_047658 55683 Hs.516341 NM_017991 ENSG00000114982 KANSL3 KIAA1310|NSL3|Rcd1 KAT8 regulatory NSL complex subunit 3 protein-coding chr8-5181 chr8 101829294 101829504 + 7.07 0.000 intron (NM_001040628, intron 4 of 7) Charlie7|DNA|hAT-Charlie -38430 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr8-6854 chr8 99697984 99698194 + 7.07 0.000 intron (NM_017890, intron 35 of 61) intron (NM_017890, intron 35 of 61) -161228 NR_030596 100126309 NR_030596 ENSG00000216069 MIR875 MIRN875|hsa-mir-875 microRNA 875 ncRNA chr3-10534 chr3 139426148 139426358 + 7.07 0.000 intron (NR_121609, intron 3 of 4) intron (NR_121609, intron 3 of 4) 36450 NR_121609 100507291 Hs.97661 NR_121608 ENSG00000248932 LOC100507291 - uncharacterized LOC100507291 ncRNA chr2-9155 chr2 211736573 211736783 + 7.07 0.000 intron (NM_001042599, intron 5 of 26) intron (NM_001042599, intron 5 of 26) 689682 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr22-2336 chr22 41572489 41572699 + 7.07 0.000 intron (NM_014460, intron 2 of 3) intron (NM_014460, intron 2 of 3) 11584 NM_014460 27254 Hs.310893 NM_014460 ENSG00000172346 CSDC2 PIPPIN|dJ347H13.2 cold shock domain containing C2 protein-coding chr1-10702 chr1 191606754 191606964 + 7.07 0.000 Intergenic Intergenic -378361 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr8-4876 chr8 64608535 64608745 + 7.07 0.000 intron (NM_004820, intron 4 of 5) intron (NM_004820, intron 4 of 5) -26748 NR_152770 401463 Hs.651960 NR_015374 ENSG00000254102 LOC401463 - uncharacterized LOC401463 ncRNA chr12-7919 chr12 108494318 108494528 + 7.07 0.000 Intergenic L2c|LINE|L2 -20734 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr10-8559 chr10 94676695 94676905 + 7.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR -6929 NM_000772 1562 Hs.511872 NM_000772 ENSG00000108242 CYP2C18 CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 cytochrome P450 family 2 subfamily C member 18 protein-coding chr5-8758 chr5 147287936 147288146 + 7.07 0.000 intron (NM_001112724, intron 4 of 12) intron (NM_001112724, intron 4 of 12) 53015 NM_001112724 202374 Hs.585069 NM_145001 ENSG00000169302 STK32A YANK1 serine/threonine kinase 32A protein-coding chr13-3051 chr13 31134500 31134710 + 7.07 0.000 TTS (NM_001349704) TTS (NM_001349704) 27299 NM_006644 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr10-5971 chr10 123727807 123728017 + 7.07 0.000 Intergenic Intergenic 61557 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr13-2384 chr13 41480356 41480566 + 7.07 0.000 Intergenic L1PA7|LINE|L1 22911 NM_014059 28984 Hs.507866 NM_014059 ENSG00000102760 RGCC C13orf15|RGC-32|RGC32|bA157L14.2 regulator of cell cycle protein-coding chr11-5074 chr11 112764800 112765010 + 7.07 0.000 Intergenic Intergenic -196515 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr8-6410 chr8 56829713 56829923 + 7.07 0.000 Intergenic L1MC1|LINE|L1 164049 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr2-5259 chr2 58436858 58437068 + 7.07 0.000 Intergenic MIR3|SINE|MIR -83790 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr7-7307 chr7 43764222 43764432 + 7.07 0.000 intron (NM_001253823, intron 2 of 8) intron (NM_001253823, intron 2 of 8) 5647 NM_000712 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chr6-7984 chr6 115062771 115062981 + 7.07 0.000 Intergenic Intergenic 580959 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr7-6277 chr7 136869139 136869349 + 7.07 0.000 promoter-TSS (NM_001006628) promoter-TSS (NM_001006628) -2 NM_001006629 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr9-4510 chr9 63761774 63761984 + 7.07 0.000 Intergenic Intergenic -51062 NR_146625 203274 Hs.599821 NR_146625 LINC00537 - long intergenic non-protein coding RNA 537 ncRNA chrX-5344 chrX 148405309 148405519 + 7.07 0.000 Intergenic Intergenic -95203 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr1-9378 chr1 30306715 30306925 + 7.07 0.000 Intergenic MER66-int|LTR|ERV1 -269208 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr16-6848 chr16 82429429 82429639 + 7.07 0.000 Intergenic L1PA17|LINE|L1 -197435 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr7-6625 chr7 112267125 112267335 + 7.07 0.000 intron (NM_021994, intron 1 of 11) intron (NM_021994, intron 1 of 11) 60535 NM_021994 11179 Hs.655904 NM_021994 ENSG00000198839 ZNF277 NRIF4|ZNF277P zinc finger protein 277 protein-coding chr10-7237 chr10 123943909 123944119 + 7.07 0.000 Intergenic L2|LINE|L2 -52207 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chrX-4227 chrX 38256672 38256882 + 7.07 0.000 Intergenic Intergenic -35853 NM_001170752 8406 Hs.15154 NM_006307 ENSG00000101955 SRPX DRS|ETX1|HEL-S-83p|SRPX1 sushi repeat containing protein X-linked protein-coding chr3-5039 chr3 35682830 35683040 + 7.07 0.000 intron (NM_001025068, intron 4 of 5) intron (NM_001025068, intron 4 of 5) 1995 NM_198399 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr10-7514 chr10 13464812 13465022 + 7.07 0.000 intron (NM_001370075, intron 5 of 8) intron (NM_001370075, intron 5 of 8) 38059 NM_152751 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr5-8002 chr5 86352867 86353077 + 7.07 0.000 Intergenic Intergenic 70528 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr21-1253 chr21 46369452 46369662 + 7.07 0.000 intron (NM_001315529, intron 15 of 46) intron (NM_001315529, intron 15 of 46) 44890 NM_001315529 5116 Hs.474069 NM_006031 ENSG00000160299 PCNT KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4 pericentrin protein-coding chr2-11236 chr2 166683686 166683896 + 7.07 0.000 Intergenic ERVL-B4-int|LTR|ERVL -196820 NR_045628 6332 Hs.596087 NM_002976 ENSG00000136546 SCN7A NaG|Nav2.1|Nav2.2|SCN6A sodium voltage-gated channel alpha subunit 7 protein-coding chr11-6077 chr11 33274854 33275064 + 7.07 0.000 intron (NM_001278162, intron 1 of 15) intron (NM_001278162, intron 1 of 15) 16628 NM_001278162 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr1-14878 chr1 81166557 81166767 + 7.07 0.000 Intergenic L2c|LINE|L2 -139530 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr7-7144 chr7 3192918 3193128 + 7.07 0.000 Intergenic Intergenic -34450 NR_126024 100129603 Hs.652997 NR_126024 LOC100129603 - uncharacterized LOC100129603 ncRNA chr15-2764 chr15 27543025 27543235 + 7.07 0.000 Intergenic Intergenic -381811 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr17-7442 chr17 12457588 12457798 + 7.07 0.000 Intergenic L1MC1|LINE|L1 -92275 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chr2-13413 chr2 141660312 141660522 + 7.07 0.000 intron (NM_018557, intron 2 of 90) L1PA10|LINE|L1 471284 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr7-4262 chr7 2728831 2729041 + 7.07 0.000 3' UTR (NM_001282441, exon 5 of 5) 3' UTR (NM_001282441, exon 5 of 5) 34204 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr10-4562 chr10 103652320 103652530 + 7.07 0.000 intron (NM_001365079, intron 2 of 8) intron (NM_001365079, intron 2 of 8) 25790 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr7-8176 chr7 30413139 30413349 + 7.07 0.000 Intergenic Intergenic 22359 NR_108081 100506516 NR_108081 ENSG00000281404 LINC01176 - long intergenic non-protein coding RNA 1176 ncRNA chr4-5990 chr4 185005208 185005418 + 7.07 0.000 Intergenic CpG -13528 NM_001300781 391723 Hs.531242 NM_001029887 ENSG00000187821 HELT HCM1228|HESL|Mgn|bHLHb44 helt bHLH transcription factor protein-coding chr9-5389 chr9 92835181 92835391 + 7.07 0.000 intron (NR_026868, intron 8 of 9) AluY|SINE|Alu 25675 NR_026868 138649 Hs.643597 NM_001010925 ENSG00000187984 ANKRD19P ANKRD19|bA526D8.2 ankyrin repeat domain 19, pseudogene pseudo chr20-3002 chr20 45768146 45768356 + 7.07 0.000 Intergenic Intergenic 23632 NM_080614 140686 Hs.419126 NM_080614 ENSG00000124116 WFDC3 WAP14|dJ447F3.3 WAP four-disulfide core domain 3 protein-coding chr14-2339 chr14 104412073 104412283 + 7.07 0.000 Intergenic L1PA5|LINE|L1 -167586 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr2-8871 chr2 176568912 176569122 + 7.07 0.000 Intergenic Intergenic 32035 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr6-4319 chr6 16085470 16085680 + 7.07 0.000 Intergenic Intergenic -43511 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr18-1879 chr18 27388302 27388512 + 7.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -45751 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr9-4384 chr9 135523257 135523467 + 7.07 0.000 intron (NM_002297, intron 3 of 6) intron (NM_002297, intron 3 of 6) 1922 NM_001252619 3933 Hs.530311 NM_002297 ENSG00000160349 LCN1 PMFA|TLC|TP|VEGP lipocalin 1 protein-coding chr4-7129 chr4 36534193 36534403 + 7.07 0.000 intron (NR_149124, intron 3 of 4) AluJb|SINE|Alu 107602 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA chr3-10531 chr3 139100302 139100512 + 7.07 0.000 Intergenic Intergenic -3778 NR_026783 60467 Hs.512673 NM_021812 ENSG00000232416 BPESC1 NCRNA00187 blepharophimosis, epicanthus inversus and ptosis candidate 1 ncRNA chr4-7616 chr4 82528397 82528607 + 7.07 0.000 intron (NM_001353454, intron 1 of 7) intron (NM_001353454, intron 1 of 7) 33486 NM_001353455 441027 Hs.507676 NM_001080506 ENSG00000249242 TMEM150C TTN3 transmembrane protein 150C protein-coding chr3-7688 chr3 45340413 45340623 + 7.07 0.000 Intergenic Intergenic -48058 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr11-8534 chr11 128669578 128669788 + 7.07 0.000 Intergenic Intergenic -16852 NM_001271012 2313 Hs.504281 NM_002017 ENSG00000151702 FLI1 BDPLT21|EWSR2|SIC-1 Fli-1 proto-oncogene, ETS transcription factor protein-coding chr11-10264 chr11 102594188 102594398 + 7.07 0.000 intron (NM_004771, intron 7 of 9) intron (NM_004771, intron 7 of 9) 31039 NM_004771 9313 Hs.591946 NM_004771 ENSG00000137674 MMP20 AI2A2|MMP-20 matrix metallopeptidase 20 protein-coding chr8-5484 chr8 50827109 50827319 + 7.07 0.000 Intergenic Intergenic 663083 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr16-6473 chr16 57670334 57670544 + 7.07 0.000 intron (NM_001308360, intron 1 of 10) intron (NM_001308360, intron 1 of 10) 2133 NM_001308360 222487 Hs.383403 NM_170776 ENSG00000182885 ADGRG3 GPR97|PB99|PGR26 adhesion G protein-coupled receptor G3 protein-coding chr6-2550 chr6 36038529 36038739 + 7.07 0.000 intron (NM_139012, intron 1 of 11) intron (NM_139012, intron 1 of 11) 10826 NM_139013 1432 Hs.485233 NM_001315 ENSG00000112062 MAPK14 CSBP|CSBP1|CSBP2|CSPB1|EXIP|Mxi2|PRKM14|PRKM15|RK|SAPK2A|p38|p38ALPHA mitogen-activated protein kinase 14 protein-coding chr10-3829 chr10 133457298 133457508 + 7.07 0.000 non-coding (NR_149718, exon 3 of 13) non-coding (NR_149718, exon 3 of 13) 3475 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr7-6422 chr7 156966290 156966500 + 7.07 0.000 exon (NM_138400, exon 8 of 11) exon (NM_138400, exon 8 of 11) 16683 NM_001353366 64434 Hs.15825 NM_138400 ENSG00000146909 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding chr7-7626 chr7 134943946 134944156 + 7.07 0.000 intron (NM_033139, intron 5 of 12) intron (NM_033139, intron 5 of 12) -42457 NM_001345853 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chrX-4062 chrX 19440427 19440637 + 7.07 0.000 intron (NM_001001671, intron 6 of 28) intron (NM_001001671, intron 6 of 28) 74729 NM_001001671 389840 Hs.713701 NM_001001671 ENSG00000180815 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding chr19-4647 chr19 16049138 16049348 + 7.07 0.000 Intergenic Intergenic 15123 NR_110321 148231 Hs.631621 NR_024335 ENSG00000167459 LINC00905 - long intergenic non-protein coding RNA 905 ncRNA chr2-13491 chr2 148680274 148680484 + 7.07 0.000 intron (NM_015630, intron 1 of 13) L2c|LINE|L2 35628 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr18-2009 chr18 42328569 42328779 + 7.07 0.000 intron (NR_046457, intron 4 of 6) intron (NR_046457, intron 4 of 6) 142006 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr5-8367 chr5 122059453 122059663 + 7.07 0.000 Intergenic Intergenic 17616 NM_001317073 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr1-10841 chr1 204207221 204207431 + 7.07 0.000 intron (NM_198447, intron 1 of 4) intron (NM_198447, intron 1 of 4) 6662 NM_198447 127845 Hs.532401 NM_198447 ENSG00000174567 GOLT1A CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b golgi transport 1A protein-coding chr11-7238 chr11 5991424 5991634 + 7.07 0.000 Intergenic Intergenic -4544 NM_001005173 338751 Hs.553703 NM_001005173 ENSG00000183313 OR52L1 OR11-50 olfactory receptor family 52 subfamily L member 1 protein-coding chr12-5453 chr12 123532303 123532513 + 7.07 0.000 intron (NM_178314, intron 1 of 6) intron (NM_178314, intron 1 of 6) 1311 NM_001319243 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr1-13918 chr1 22544013 22544223 + 7.07 0.000 Intergenic MIRc|SINE|MIR -19371 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr20-3847 chr20 24953762 24953972 + 7.07 0.000 intron (NM_003650, intron 1 of 3) intron (NM_003650, intron 1 of 3) 4598 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr10-7629 chr10 22873904 22874114 + 7.07 0.000 Intergenic MER39|LTR|ERV1 -54015 NM_001282747 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding chr10-7692 chr10 29566525 29566735 + 7.07 0.000 intron (NM_001323599, intron 4 of 38) intron (NM_001323599, intron 4 of 38) -21533 NR_030335 693189 NR_030335 ENSG00000207612 MIR604 MIRN604|hsa-mir-604 microRNA 604 ncRNA chr2-9948 chr2 603704 603914 + 7.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR 45608 NR_136168 105373352 NR_136168 LOC105373352 - uncharacterized LOC105373352 ncRNA chr16-6856 chr16 83029416 83029626 + 7.07 0.000 intron (NM_001220490, intron 2 of 12) L1MC5a|LINE|L1 -39223 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr3-9974 chr3 97694989 97695199 + 7.07 0.000 intron (NM_001080448, intron 14 of 17) Eulor3|DNA?|DNA? -69427 NM_032146 84100 Hs.373801 NM_032146 ENSG00000113966 ARL6 BBS3|RP55 ADP ribosylation factor like GTPase 6 protein-coding chr15-3178 chr15 69674933 69675143 + 7.07 0.000 intron (NR_126438, intron 2 of 3) intron (NR_126438, intron 2 of 3) 82838 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr3-4215 chr3 134067700 134067910 + 7.07 0.000 Intergenic Intergenic -10157 NR_135574 100507210 Hs.669052 NR_135574 ENSG00000243832 LINC02000 - long intergenic non-protein coding RNA 2000 ncRNA chr9-8061 chr9 97760061 97760271 + 7.07 0.000 intron (NR_147055, intron 5 of 10) L2b|LINE|L2 -62757 NM_000380 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr2-7036 chr2 154988641 154988851 + 7.07 0.000 Intergenic L1PA2|LINE|L1 290051 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr12-6188 chr12 19311456 19311666 + 7.07 0.000 intron (NM_001143821, intron 14 of 27) Tigger1|DNA|TcMar-Tigger 106236 NM_001256787 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr9-4318 chr9 126029922 126030132 + 7.07 0.000 Intergenic Intergenic 245888 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr11-10136 chr11 89274950 89275160 + 7.07 0.000 intron (NM_000372, intron 3 of 4) intron (NM_000372, intron 3 of 4) 97180 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chrX-3394 chrX 3631499 3631709 + 7.07 0.000 intron (NM_005044, intron 4 of 8) MLT1C|LTR|ERVL-MaLR -27883 NR_046643 100873944 NR_046643 ENSG00000236188 PRKX-AS1 - PRKX antisense RNA 1 ncRNA chr4-5040 chr4 141155634 141155844 + 7.07 0.000 Intergenic MER49|LTR|ERV1 -22270 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr12-6482 chr12 102120959 102121169 + 7.07 0.000 promoter-TSS (NM_024057) promoter-TSS (NM_024057) 881 NM_001319995 55010 Hs.330663 NM_017915 ENSG00000185480 PARPBP AROM|C12orf48|PARI PARP1 binding protein protein-coding chr1-15097 chr1 99379543 99379753 + 7.07 0.000 Intergenic L2b|LINE|L2 108156 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr9-8002 chr9 94001279 94001489 + 7.07 0.000 Intergenic ERVL-E-int|LTR|ERVL -29429 NM_001253830 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding chr9-2238 chr9 19127227 19127437 + 7.07 0.000 intron (NR_038064, intron 1 of 6) CpG 160 NM_001122 123 Hs.3416 NM_001122 ENSG00000147872 PLIN2 ADFP|ADRP perilipin 2 protein-coding chr14-4148 chr14 74905697 74905907 + 7.07 0.000 non-coding (NR_163406, exon 12 of 12) non-coding (NR_163406, exon 12 of 12) 16640 NM_031464 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding chr9-7763 chr9 77138053 77138263 + 7.07 0.000 Intergenic AluSg|SINE|Alu -39287 NM_001018038 23230 Hs.459790 NM_015186 ENSG00000197969 VPS13A CHAC|CHOREIN vacuolar protein sorting 13 homolog A protein-coding chr3-9342 chr3 46373471 46373681 + 7.07 0.000 exon (NM_001100168, exon 3 of 3) exon (NM_001100168, exon 3 of 3) 3434 NM_001100168 1234 Hs.450802 NM_000579 ENSG00000160791 CCR5 CC-CKR-5|CCCKR5|CCR-5|CD195|CKR-5|CKR5|CMKBR5|IDDM22 C-C motif chemokine receptor 5 (gene/pseudogene) protein-coding chr3-8255 chr3 50532667 50532877 + 7.07 0.000 Intergenic Intergenic -28528 NM_001291101 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chrX-1799 chrX 86568591 86568801 + 7.07 0.000 intron (NM_001139515, intron 3 of 11) intron (NM_001139515, intron 3 of 11) 305728 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr15-4689 chr15 65629916 65630126 + 7.07 0.000 intron (NM_001301033, intron 4 of 11) AluJr|SINE|Alu 6066 NM_001301032 9187 Hs.173092 NM_004727 ENSG00000074621 SLC24A1 CSNB1D|HsT17412|NCKX|NCKX1|RODX solute carrier family 24 member 1 protein-coding chr10-8988 chr10 120388513 120388723 + 7.07 0.000 Intergenic Intergenic -33395 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr5-8690 chr5 141781606 141781816 + 7.07 0.000 Intergenic Intergenic 84491 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr17-5627 chr17 49387780 49387990 + 7.07 0.000 Intergenic MIR|SINE|MIR -25412 NM_014897 22834 Hs.463375 NM_014897 ENSG00000198740 ZNF652 - zinc finger protein 652 protein-coding chr8-5385 chr8 23626682 23626892 + 7.07 0.000 Intergenic Intergenic 56102 NM_001256339 4824 Hs.55999 NM_006167 ENSG00000167034 NKX3-1 BAPX2|NKX3|NKX3.1|NKX3A NK3 homeobox 1 protein-coding chr4-4229 chr4 16625670 16625880 + 7.07 0.000 intron (NM_001304435, intron 2 of 7) intron (NM_001304435, intron 2 of 7) 272870 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr22-4128 chr22 44404247 44404457 + 7.07 0.000 Intergenic Intergenic -38975 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 - long intergenic non-protein coding RNA 1656 ncRNA chr2-10932 chr2 75340233 75340443 + 7.07 0.000 Intergenic Intergenic -140818 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chrX-2237 chrX 45808814 45809024 + 7.07 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 42571 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr2-9363 chr2 228209903 228210113 + 7.07 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -28321 NM_001142644 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr7-5126 chr7 5103152 5103362 + 7.07 0.000 Intergenic Intergenic 31197 NR_015343 389458 Hs.733005 NM_203393 ENSG00000273313 RBAKDN - RBAK downstream neighbor ncRNA chr1-10218 chr1 114585781 114585991 + 7.07 0.000 intron (NM_001256404, intron 20 of 20) MER5B|DNA|hAT-Charlie -4271 NM_005872 10286 Hs.22960 NM_005872 ENSG00000116752 BCAS2 DAM1|SPF27|Snt309 BCAS2 pre-mRNA processing factor protein-coding chr4-4111 chr4 6565420 6565630 + 7.07 0.000 Intergenic L2c|LINE|L2 -1726 NM_001206994 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr5-4427 chr5 1193713 1193923 + 7.07 0.000 Intergenic CpG -7777 NM_001003841 340024 Hs.481478 NM_001003841 ENSG00000174358 SLC6A19 B0AT1|HND solute carrier family 6 member 19 protein-coding chrX-2254 chrX 47256691 47256901 + 7.07 0.000 Intergenic AluSx1|SINE|Alu 23787 NM_001371072 chr6-6364 chr6 65527304 65527514 + 7.07 0.000 intron (NM_001292009, intron 2 of 43) ERVL-E-int|LTR|ERVL 52395 NM_198283 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding chr2-8452 chr2 121351520 121351730 + 7.07 0.000 intron (NM_015282, intron 36 of 38) intron (NM_015282, intron 36 of 38) -66423 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr15-3473 chr15 94898194 94898404 + 7.07 0.000 Intergenic LTR29|LTR|ERV1 42936 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr12-5572 chr12 14995644 14995854 + 7.07 0.000 Intergenic Intergenic -6084 NR_120466 101928340 Hs.401232 NR_120466 ENSG00000255727 LINC01489 - long intergenic non-protein coding RNA 1489 ncRNA chr18-2707 chr18 62988700 62988910 + 7.07 0.000 Intergenic L2|LINE|L2 273264 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr11-10674 chr11 128180606 128180816 + 7.07 0.000 Intergenic Intergenic -28055 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr15-2217 chr15 92326020 92326230 + 7.07 0.000 Intergenic G-rich|Low_complexity|Low_complexity -67756 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr7-2827 chr7 100483535 100483745 + 7.07 0.000 promoter-TSS (NM_173564) promoter-TSS (NM_173564) -287 NM_173564 222950 Hs.320086 NM_173564 ENSG00000166924 NYAP1 C7orf51 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 protein-coding chr1-16141 chr1 205359679 205359889 + 7.07 0.000 Intergenic Intergenic -2694 NM_001271864 55220 Hs.10414 NM_018203 ENSG00000162873 KLHDC8A - kelch domain containing 8A protein-coding chr2-10361 chr2 169213390 169213600 + 7.07 0.000 intron (NM_004525, intron 36 of 78) intron (NM_004525, intron 36 of 78) 132388 NM_001142271 10170 Hs.179608 NM_005771 ENSG00000073737 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase 9 protein-coding chr18-2398 chr18 3710374 3710584 + 7.07 0.000 intron (NM_001308390, intron 4 of 10) intron (NM_001308390, intron 4 of 10) 106742 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chrX-3048 chrX 101104663 101104873 + 7.07 0.000 intron (NM_001318523, intron 2 of 13) AluJr|SINE|Alu 3710 NM_001318523 2491 Hs.348920 NM_006733 ENSG00000102384 CENPI CENP-I|FSHPRH1|LRPR1 centromere protein I protein-coding chr12-4167 chr12 87409433 87409643 + 7.07 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 78799 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr5-4455 chr5 5642304 5642514 + 7.07 0.000 Intergenic L1MEg|LINE|L1 219732 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr15-4891 chr15 76484355 76484565 + 7.07 0.000 intron (NR_148227, intron 24 of 32) L1PA13|LINE|L1 -102187 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr8-6478 chr8 62643897 62644107 + 7.07 0.000 intron (NM_001304533, intron 3 of 6) LTR33|LTR|ERVL -333859 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr5-8526 chr5 134432590 134432800 + 7.07 0.000 intron (NR_105044, intron 1 of 2) intron (NR_105044, intron 1 of 2) 2352 NR_105044 102546229 NR_105044 LOC102546229 - uncharacterized LOC102546229 ncRNA chr7-9184 chr7 115676135 115676345 + 7.07 0.000 Intergenic Intergenic -94799 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr8-7201 chr8 125620344 125620554 + 7.07 0.000 Intergenic Intergenic 188240 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr3-7255 chr3 195950026 195950236 + 7.07 0.000 Intergenic Intergenic 40148 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr9-6912 chr9 91986237 91986447 + 7.07 0.000 Intergenic ERVL-B4-int|LTR|ERVL -36114 NM_001318204 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr2-7907 chr2 56610732 56610942 + 7.07 0.000 Intergenic L1MCb|LINE|L1 -425067 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr17-3245 chr17 20586699 20586909 + 7.07 0.000 Intergenic AluSc|SINE|Alu 7080 NM_001190790 256223 Hs.131916 NM_001190790 ENSG00000214819 CDRT15L2 - CMT1A duplicated region transcript 15 like 2 protein-coding chr7-3750 chr7 75105629 75105839 + 7.07 0.000 intron (NM_001368302, intron 1 of 15) intron (NM_001368302, intron 1 of 15) 11702 NM_001368302 389524 Hs.647017 NM_001003795 ENSG00000174428 GTF2IRD2B GTF2IRD2|GTF2IRD2A GTF2I repeat domain containing 2B protein-coding chr8-3115 chr8 52158967 52159177 + 7.07 0.000 exon (NM_001352827, exon 16 of 27) exon (NM_001352827, exon 16 of 27) -35290 NR_134310 101929341 Hs.147170 NR_134310 ENSG00000253551 LOC101929341 - uncharacterized LOC101929341 ncRNA chr12-7563 chr12 72900334 72900544 + 7.07 0.000 Intergenic AluSg|SINE|Alu -258751 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LINC02444 - long intergenic non-protein coding RNA 2444 ncRNA chr4-7600 chr4 81580280 81580490 + 7.07 0.000 Intergenic LTR12C|LTR|ERV1 -108478 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr15-4824 chr15 73482883 73483093 + 7.07 0.000 intron (NM_001348772, intron 2 of 4) L1MB3|LINE|L1 39824 NM_001348772 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chrX-3405 chrX 8693203 8693413 + 7.07 0.000 intron (NM_000216, intron 2 of 13) intron (NM_000216, intron 2 of 13) 38829 NM_000216 3730 Hs.521869 NM_000216 ENSG00000011201 ANOS1 ADMLX|HH1|HHA|KAL|KAL1|KALIG-1|KMS|WFDC19 anosmin 1 protein-coding chr8-6836 chr8 98066312 98066522 + 7.07 0.000 intron (NM_001170806, intron 1 of 1) intron (NM_001170806, intron 1 of 1) 1849 NM_173549 203111 Hs.171455 NM_173549 ENSG00000177459 ERICH5 C8orf47 glutamate rich 5 protein-coding chr8-6097 chr8 27315369 27315579 + 7.07 0.000 intron (NM_173174, intron 3 of 35) intron (NM_173174, intron 3 of 35) 3996 NM_173174 2185 Hs.491322 NM_004103 ENSG00000120899 PTK2B CADTK|CAKB|FADK2|FAK2|PKB|PTK|PYK2|RAFTK protein tyrosine kinase 2 beta protein-coding chr8-6382 chr8 54506325 54506535 + 7.07 0.000 Intergenic L1MEg|LINE|L1 48495 NM_022454 64321 Hs.98367 NM_022454 ENSG00000164736 SOX17 VUR3 SRY-box transcription factor 17 protein-coding chr14-3164 chr14 69452959 69453169 + 7.07 0.000 intron (NM_001252148, intron 3 of 5) AluSz|SINE|Alu -31664 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr19-6324 chr19 10321201 10321411 + 7.07 0.000 intron (NM_001366174, intron 7 of 13) intron (NM_001366174, intron 7 of 13) -5291 NM_001031734 112812 Hs.654865 NM_080665 ENSG00000267673 FDX2 FDX1L|MEOAL ferredoxin 2 protein-coding chr4-4891 chr4 118905115 118905325 + 7.07 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) 16366 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chrX-4399 chrX 52554010 52554220 + 7.07 0.000 Intergenic Intergenic -36894 NM_001097604 653067 Hs.112208 NM_020411 ENSG00000204382 XAGE1B CT12.1|CT12.1C|CT12.1D|CT12.1E|CT12.1b|CTP9|GAGED2|XAGE-1|XAGE1|XAGE1C|XAGE1D|XAGE1E X antigen family member 1B protein-coding chr13-3773 chr13 44030530 44030740 + 7.07 0.000 TTS (NR_026955) TTS (NR_026955) 8300 NR_026955 121838 Hs.201441 NR_026955 LINC00284 NCRNA00284 long intergenic non-protein coding RNA 284 ncRNA chr13-4304 chr13 99875860 99876070 + 7.07 0.000 intron (NR_104592, intron 7 of 9) intron (NR_104592, intron 7 of 9) 81200 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr1-15900 chr1 183953256 183953466 + 7.07 0.000 intron (NM_015101, intron 7 of 11) intron (NM_015101, intron 7 of 11) 84367 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr8-5243 chr8 127870676 127870886 + 7.07 0.000 intron (NR_003367, intron 1 of 8) MIRb|SINE|MIR 74819 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr3-5460 chr3 183595846 183596056 + 7.07 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -39672 NM_001349425 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding chr13-2638 chr13 78718701 78718911 + 7.07 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -59651 NM_024546 79596 Hs.567576 NM_024546 ENSG00000152193 OBI1 C13orf7|RNF219 ORC ubiquitin ligase 1 protein-coding chr11-6447 chr11 66685776 66685986 + 7.07 0.000 exon (NM_006946, exon 37 of 37) exon (NM_006946, exon 37 of 37) -7994 NM_001286135 83759 Hs.618713 NM_031492 ENSG00000173914 RBM4B RBM30|RBM4L|ZCCHC15|ZCCHC21B|ZCRB3B RNA binding motif protein 4B protein-coding chr20-4247 chr20 48638605 48638815 + 7.07 0.000 intron (NM_020820, intron 30 of 39) (CCAGG)n|Simple_repeat|Simple_repeat 189289 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr19-6610 chr19 29152653 29152863 + 7.07 0.000 Intergenic L2|LINE|L2 60393 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr13-1786 chr13 20391639 20391849 + 7.07 0.000 Intergenic Intergenic 42102 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr21-883 chr21 45019198 45019408 + 7.07 0.000 Intergenic CpG -14576 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr4-7590 chr4 80703466 80703676 + 7.07 0.000 intron (NM_001206997, intron 4 of 6) intron (NM_001206997, intron 4 of 6) -327137 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr5-6956 chr5 141683778 141683988 + 7.07 0.000 Intergenic LTR16B2|LTR|ERVL -1653 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr22-3040 chr22 31440615 31440825 + 7.07 0.000 exon (NM_001164501, exon 18 of 19) exon (NM_001164501, exon 18 of 19) 41116 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chr20-2612 chr20 40436603 40436813 + 7.07 0.000 Intergenic AluSx1|SINE|Alu 252528 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr10-7255 chr10 125542222 125542432 + 7.07 0.000 Intergenic Intergenic -32044 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr5-5210 chr5 114455929 114456139 + 7.07 0.000 intron (NR_130785, intron 11 of 12) Tigger1|DNA|TcMar-Tigger 22523 NM_170775 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr8-4829 chr8 23034711 23034921 + 7.07 0.000 intron (NR_027140, intron 1 of 8) ERVL-B4-int|LTR|ERVL -33413 NR_038873 286059 Hs.306673 NR_038873 ENSG00000246130 LOC286059 - TNF receptor superfamily member 10d pseudogene pseudo chr7-4349 chr7 48195782 48195992 + 7.07 0.000 intron (NM_152701, intron 2 of 61) L2c|LINE|L2 24429 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr11-3839 chr11 69030826 69031036 + 7.07 0.000 Intergenic AluSp|SINE|Alu -17549 NM_001098515 116535 Hs.118513 NM_145015 ENSG00000172935 MRGPRF GPR140|GPR168|MRGF|RTA MAS related GPR family member F protein-coding chr2-14007 chr2 191075918 191076128 + 7.07 0.000 intron (NM_003151, intron 4 of 23) AluJr4|SINE|Alu 54497 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr2-9510 chr2 237345568 237345778 + 7.07 0.000 intron (NM_057166, intron 29 of 40) Plat_L3|LINE|CR1 68491 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr14-4160 chr14 77118331 77118541 + 7.07 0.000 Intergenic Intergenic 20178 NM_033426 85457 Hs.709066 NM_033426 ENSG00000198894 CIPC KIAA1737 CLOCK interacting pacemaker protein-coding chr12-4362 chr12 3488884 3489094 + 7.07 0.000 non-coding (NR_126055, exon 2 of 2) non-coding (NR_126055, exon 2 of 2) -2214 NM_019854 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr17-4614 chr17 6298589 6298799 + 7.07 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 136427 NM_001285399 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr2-11459 chr2 229164851 229165061 + 7.07 0.000 intron (NM_001100818, intron 1 of 2) L1ME1|LINE|L1 67136 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr5-3560 chr5 57598996 57599206 + 7.07 0.000 intron (NR_120607, intron 4 of 5) intron (NR_120607, intron 4 of 5) 28759 NR_120607 100996645 Hs.582496 NR_120607 LINCR-0003 - uncharacterized LincR-0003 ncRNA chr12-2018 chr12 42589513 42589723 + 7.07 0.000 5' UTR (NM_153026, exon 1 of 8) 5' UTR (NM_153026, exon 1 of 8) 128 NM_153026 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr1-14632 chr1 56484124 56484334 + 7.07 0.000 Intergenic L2c|LINE|L2 69266 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr4-7320 chr4 55091163 55091373 + 7.07 0.000 intron (NM_002253, intron 22 of 29) intron (NM_002253, intron 22 of 29) 34327 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr22-3651 chr22 22239028 22239238 + 7.07 0.000 Intergenic AluSz6|SINE|Alu -5653 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr1-15933 chr1 186910601 186910811 + 7.07 0.000 intron (NM_024420, intron 6 of 17) intron (NM_024420, intron 6 of 17) 81757 NM_001311193 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr2-4624 chr2 159666141 159666351 + 7.07 0.000 Intergenic L1MEf|LINE|L1 46196 NR_110586 29994 Hs.470369 NM_013450 ENSG00000123636 BAZ2B WALp4 bromodomain adjacent to zinc finger domain 2B protein-coding chr12-7638 chr12 81456469 81456679 + 7.07 0.000 intron (NM_001282536, intron 2 of 29) intron (NM_001282536, intron 2 of 29) 55817 NM_001282536 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr4-4061 chr4 3428805 3429015 + 7.07 0.000 intron (NM_002926, intron 16 of 16) intron (NM_002926, intron 16 of 16) -13058 NM_001528 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr11-9987 chr11 78356200 78356410 + 7.07 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) -14425 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr2-14604 chr2 233458568 233458778 + 7.07 0.000 intron (NM_152879, intron 22 of 29) AluSx1|SINE|Alu 70519 NM_003648 8527 Hs.471675 NM_003648 ENSG00000077044 DGKD DGKdelta|dgkd-2 diacylglycerol kinase delta protein-coding GL000220.1-2 GL000220.1 144774 144984 + 7.07 0.000 NA NA NA NA chr22-2506 chr22 22916453 22916663 + 7.07 0.000 Intergenic Intergenic 28742 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr10-8034 chr10 63456387 63456597 + 7.07 0.000 intron (NM_001322258, intron 1 of 24) intron (NM_001322258, intron 1 of 24) -8737 NR_027182 84989 Hs.659950 NM_032903 ENSG00000272767 JMJD1C-AS1 - JMJD1C antisense RNA 1 ncRNA chr19-2874 chr19 16263235 16263445 + 7.07 0.000 Intergenic Intergenic -61486 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr13-2115 chr13 90053499 90053709 + 7.07 0.000 Intergenic LTR16E1|LTR|ERVL 66113 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr3-7648 chr3 32153105 32153315 + 7.07 0.000 intron (NM_015141, intron 5 of 7) intron (NM_015141, intron 5 of 7) 46699 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chrX-3488 chrX 38220141 38220351 + 7.07 0.000 intron (NM_006307, intron 1 of 9) intron (NM_006307, intron 1 of 9) 625 NM_006307 8406 Hs.15154 NM_006307 ENSG00000101955 SRPX DRS|ETX1|HEL-S-83p|SRPX1 sushi repeat containing protein X-linked protein-coding chr10-7800 chr10 37243327 37243537 + 7.07 0.000 Intergenic AluY|SINE|Alu -65754 NR_104061 101929520 Hs.144151 NR_104061 ENSG00000235687 LINC00993 - long intergenic non-protein coding RNA 993 ncRNA chr7-7267 chr7 31736578 31736788 + 7.07 0.000 Intergenic Intergenic 49468 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr3-10384 chr3 128984844 128985054 + 7.07 0.000 intron (NM_001348522, intron 5 of 8) intron (NM_001348522, intron 5 of 8) 6948 NM_001348523 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr12-4030 chr12 43594709 43594919 + 7.07 0.000 Intergenic Intergenic -42611 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr1-6933 chr1 154474109 154474319 + 7.07 0.000 Intergenic Intergenic -28005 NM_182499 126668 Hs.387671 NM_182499 ENSG00000163239 TDRD10 - tudor domain containing 10 protein-coding chr4-7518 chr4 75098629 75098839 + 7.07 0.000 Intergenic L1M1|LINE|L1 -14026 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA chr13-2318 chr13 32555969 32556179 + 7.07 0.000 Intergenic HAL1ME|LINE|L1 -17189 NM_001278432 10443 Hs.507680 NM_014887 ENSG00000244754 N4BP2L2 92M18.3|CG005|CG016|PFAAP5 NEDD4 binding protein 2 like 2 protein-coding chr11-8677 chr11 4106382 4106592 + 7.07 0.000 intron (NM_001033, intron 3 of 18) AluSx1|SINE|Alu -9591 NM_001318065 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chrX-4383 chrX 50746440 50746650 + 7.07 0.000 intron (NR_027121, intron 1 of 9) intron (NR_027121, intron 1 of 9) 67499 NM_020717 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding chr8-3723 chr8 21364404 21364614 + 7.07 0.000 Intergenic Intergenic 66270 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA chr11-5741 chr11 2520029 2520239 + 7.07 0.000 intron (NM_181798, intron 1 of 15) intron (NM_181798, intron 1 of 15) 58680 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr9-5754 chr9 127143070 127143280 + 7.07 0.000 intron (NM_001190729, intron 8 of 17) L1ME4c|LINE|L1 -20540 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr7-8264 chr7 37784392 37784602 + 7.07 0.000 Intergenic Intergenic -64100 NM_016616 51314 Hs.723454 NM_016616 ENSG00000086288 NME8 CILD6|HEL-S-99|NM23-H8|SPTRX2|TXNDC3|sptrx-2 NME/NM23 family member 8 protein-coding chr4-2808 chr4 35541693 35541903 + 7.07 0.000 Intergenic L1PA16|LINE|L1 702141 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chrX-2913 chrX 151577739 151577949 + 7.07 0.000 intron (NM_173493, intron 1 of 15) intron (NM_173493, intron 1 of 15) 14169 NM_173493 139135 Hs.160594 NM_173493 ENSG00000166049 PASD1 CT63|CT64|OXTES1 PAS domain containing repressor 1 protein-coding chr3-11124 chr3 186817673 186817883 + 7.07 0.000 intron (NR_125409, intron 3 of 3) intron (NR_125409, intron 3 of 3) 7743 NR_125409 102724699 Hs.518476 NR_125409 ENSG00000232233 LINC02043 - long intergenic non-protein coding RNA 2043 ncRNA chr1-16500 chr1 229778859 229779069 + 7.07 0.000 Intergenic Intergenic 106854 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr10-7745 chr10 32825074 32825284 + 7.07 0.000 intron (NM_001321115, intron 33 of 43) L1M4b|LINE|L1 76293 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr16-5178 chr16 5549951 5550161 + 7.07 0.000 Intergenic Tigger9b|DNA|TcMar-Tigger 66194 NR_110902 101926950 Hs.613285 NR_110902 ENSG00000260338 LINC01570 - long intergenic non-protein coding RNA 1570 ncRNA chr1-15468 chr1 154763576 154763786 + 7.07 0.000 intron (NM_001204087, intron 3 of 8) intron (NM_001204087, intron 3 of 8) 96195 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr19-6584 chr19 22728046 22728256 + 7.07 0.000 Intergenic BSR/Beta|Satellite|Satellite 56000 NM_001080409 7652 Hs.737077 NM_001080409 ENSG00000213973 ZNF99 C19orf9|F8281 zinc finger protein 99 protein-coding chr1-12432 chr1 12003678 12003888 + 7.07 0.000 intron (NM_001127660, intron 10 of 17) intron (NM_001127660, intron 10 of 17) -15715 NM_021933 60672 Hs.8595 NM_021933 ENSG00000116691 MIIP IIP45 migration and invasion inhibitory protein protein-coding chr2-14433 chr2 222475381 222475591 + 7.07 0.000 intron (NM_152386, intron 2 of 4) intron (NM_152386, intron 2 of 4) 50943 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr15-2966 chr15 50406434 50406644 + 7.07 0.000 Intergenic AluSc|SINE|Alu -17866 NM_001283049 9101 Hs.443731 NM_005154 ENSG00000138592 USP8 HumORF8|PITA4|SPG59|UBPY ubiquitin specific peptidase 8 protein-coding chr6-2470 chr6 38415719 38415929 + 7.07 0.000 intron (NM_001172418, intron 5 of 10) intron (NM_001172418, intron 5 of 10) -65772 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr1-13949 chr1 24179207 24179417 + 7.07 0.000 intron (NM_173065, intron 2 of 5) MIR|SINE|MIR 7977 NM_170743 163702 Hs.221375 NM_170743 ENSG00000185436 IFNLR1 CRF2/12|IFNLR|IL-28R1|IL28RA|LICR2 interferon lambda receptor 1 protein-coding chr2-12735 chr2 82852347 82852557 + 7.07 0.000 Intergenic Charlie3|DNA|hAT-Charlie -4351 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr19-5597 chr19 2434980 2435190 + 7.07 0.000 promoter-TSS (NR_106958) promoter-TSS (NR_106958) -85 NR_106958 102466806 NR_106958 ENSG00000283728 MIR7108 hsa-mir-7108 microRNA 7108 ncRNA chr4-5374 chr4 187261128 187261338 + 7.07 0.000 Intergenic L1ME3|LINE|L1 59247 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr11-3812 chr11 66411704 66411914 + 7.07 0.000 Intergenic Intergenic -9195 NM_001318804 266743 Hs.256036 NM_178864 ENSG00000174576 NPAS4 Le-PAS|NXF|PASD10|bHLHe79 neuronal PAS domain protein 4 protein-coding chr18-3157 chr18 42135851 42136061 + 7.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -50712 NR_046174 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr13-2343 chr13 34695258 34695468 + 7.07 0.000 Intergenic Intergenic -54678 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr2-13122 chr2 115804719 115804929 + 7.07 0.000 intron (NM_001321912, intron 20 of 25) L1PA4|LINE|L1 461009 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr22-4304 chr22 50151852 50152062 + 7.07 0.000 intron (NM_018995, intron 21 of 26) LTR78|LTR|ERV1 4902 NM_001164106 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chr9-6339 chr9 7881167 7881377 + 7.07 0.000 Intergenic L1PA8|LINE|L1 -81494 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr12-4399 chr12 6312817 6313027 + 7.07 0.000 5' UTR (NM_001144857, exon 1 of 15) 5' UTR (NM_001144857, exon 1 of 15) 271 NM_001144857 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr15-3638 chr15 79821552 79821762 + 7.07 0.000 Intergenic ERVL-E-int|LTR|ERVL 75340 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr18-3367 chr18 58564986 58565196 + 7.07 0.000 intron (NM_052947, intron 4 of 12) L1ME3G|LINE|L1 -35529 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr1-5493 chr1 155227514 155227724 + 7.07 0.000 promoter-TSS (NR_002188) promoter-TSS (NR_002188) -85 NR_002188 2630 Hs.719930 NR_002188 ENSG00000160766 GBAP1 Beta-GC|GBA|GBAP|GC|GLUC glucosylceramidase beta pseudogene 1 pseudo chr10-7539 chr10 14670921 14671131 + 7.07 0.000 intron (NM_031453, intron 1 of 4) MLT1K|LTR|ERVL-MaLR -66625 NM_001282697 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr1-14018 chr1 26829183 26829393 + 7.07 0.000 intron (NM_032283, intron 1 of 7) L2a|LINE|L2 2600 NM_032283 84243 Hs.523710 NM_032283 ENSG00000204160 ZDHHC18 DHHC-18|DHHC18 zinc finger DHHC-type containing 18 protein-coding chr12-5548 chr12 133254378 133254588 + 7.07 0.000 Intergenic Intergenic -18647 NM_001191054 647589 Hs.703008 NM_001191054 ENSG00000227059 ANHX - anomalous homeobox protein-coding chr20-3334 chr20 23712563 23712773 + 7.07 0.000 Intergenic Intergenic -23643 NM_001899 1472 Hs.654549 NM_001899 ENSG00000101441 CST4 - cystatin S protein-coding chr9-5470 chr9 99337962 99338172 + 7.07 0.000 Intergenic Intergenic 37190 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr4-5268 chr4 173672323 173672533 + 7.07 0.000 Intergenic Intergenic 141970 NR_003679 79804 Hs.61435 NR_003679 ENSG00000237125 HAND2-AS1 DEIN|NBLA00301|UPH HAND2 antisense RNA 1 ncRNA chr2-10898 chr2 69868076 69868286 + 7.07 0.000 intron (NM_178439, intron 11 of 13) FLAM_A|SINE|Alu -25775 NM_006857 11017 Hs.54649 NM_006857 ENSG00000124380 SNRNP27 27K|RY1 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 protein-coding chr12-7526 chr12 69428695 69428905 + 7.07 0.000 Intergenic L1MEc|LINE|L1 -41588 NM_001042555 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding chr6-4408 chr6 26879782 26879992 + 7.07 0.000 intron (NR_003504, intron 6 of 8) AluJb|SINE|Alu 76667 NR_003504 387036 Hs.675815 NM_001033523 ENSG00000241549 GUSBP2 GUSBL1|GUSBP4|SMA3-L|SMAC3L|SMAC3L2|b55C20.1|bA239L20.1|bA239L20.5|bGLU-Lp GUSB pseudogene 2 pseudo chr8-5823 chr8 4663249 4663459 + 7.07 0.000 intron (NM_033225, intron 1 of 69) intron (NM_033225, intron 1 of 69) 331560 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr20-2692 chr20 46548800 46549010 + 7.07 0.000 intron (NM_080721, intron 1 of 2) MLT1K|LTR|ERVL-MaLR 1749 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr5-1938 chr5 828289 828499 + 7.07 0.000 intron (NM_024786, intron 7 of 12) SVA_D|Retroposon|SVA 22592 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr18-1689 chr18 79433368 79433578 + 7.07 0.000 intron (NM_001278672, intron 2 of 8) CpG 33174 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr17-4907 chr17 74394579 74394789 + 7.07 0.000 Intergenic Intergenic 27178 NM_001331076 350383 Hs.574368 NM_181790 ENSG00000257008 GPR142 GPRg1b|PGR2 G protein-coupled receptor 142 protein-coding chr11-7934 chr11 2447219 2447429 + 7.07 0.000 intron (NM_000218, intron 1 of 15) intron (NM_000218, intron 1 of 15) 2333 NM_000218 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr20-3614 chr20 6102717 6102927 + 7.07 0.000 intron (NM_017671, intron 6 of 14) intron (NM_017671, intron 6 of 14) 20722 NM_017671 55612 Hs.472054 NM_017671 ENSG00000101311 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding chr6-7931 chr6 110394010 110394220 + 7.07 0.000 intron (NR_160546, intron 2 of 2) AluJb|SINE|Alu 21460 NM_004032 8528 Hs.591348 NM_003649 ENSG00000203797 DDO DASOX|DDO-1|DDO-2 D-aspartate oxidase protein-coding chr7-5357 chr7 30664718 30664928 + 7.07 0.000 intron (NM_001202481, intron 7 of 13) intron (NM_001202481, intron 7 of 13) 17633 NM_001883 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr16-6547 chr16 64374115 64374325 + 7.07 0.000 Intergenic Intergenic 747843 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr4-4309 chr4 28799535 28799745 + 7.07 0.000 Intergenic Intergenic -19942 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr10-8071 chr10 66928016 66928226 + 7.07 0.000 exon (NM_178011, exon 2 of 3) exon (NM_178011, exon 2 of 3) 2085 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr21-1855 chr21 42001995 42002205 + 7.07 0.000 intron (NM_020727, intron 1 of 1) intron (NM_020727, intron 1 of 1) -7094 NR_119384 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA chr14-5370 chr14 103454009 103454219 + 7.07 0.000 intron (NM_001128920, intron 5 of 15) MIRb|SINE|MIR 68699 NM_001128918 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chrX-5184 chrX 133741407 133741617 + 7.07 0.000 intron (NM_001164617, intron 3 of 8) intron (NM_001164617, intron 3 of 8) -155931 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chrX-3043 chrX 99640980 99641190 + 7.07 0.000 Intergenic MIRb|SINE|MIR 769188 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr13-2495 chr13 52162582 52162792 + 7.07 0.000 Intergenic Intergenic -2826 NR_027415 4752 Hs.409989 NM_002498 ENSG00000136098 NEK3 HSPK36 NIMA related kinase 3 protein-coding chr3-7491 chr3 153702722 153702932 + 7.07 0.000 intron (NR_146713, intron 2 of 6) L1ME3A|LINE|L1 59699 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr13-2189 chr13 20250776 20250986 + 7.07 0.000 Intergenic L1M4a1|LINE|L1 -18486 NM_001110221 10804 Hs.511757 NM_006783 ENSG00000121742 GJB6 CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2 gap junction protein beta 6 protein-coding chr6-7054 chr6 27296241 27296451 + 7.07 0.000 Intergenic Intergenic 15886 NM_033482 94026 Hs.729955 NM_033482 ENSG00000158553 POM121L2 POM121-L|POM121L POM121 transmembrane nucleoporin like 2 protein-coding chrX-2357 chrX 65841146 65841356 + 7.07 0.000 Intergenic Intergenic 173597 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr3-8458 chr3 122936515 122936725 + 7.07 0.000 intron (NR_046079, intron 5 of 22) L2|LINE|L2 39514 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr18-2039 chr18 46243088 46243298 + 7.07 0.000 intron (NM_145055, intron 3 of 4) intron (NM_145055, intron 3 of 4) 69159 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr18-1569 chr18 32911858 32912068 + 7.07 0.000 Intergenic Intergenic -138940 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr11-10228 chr11 99114089 99114299 + 7.07 0.000 intron (NM_001243270, intron 1 of 23) CR1_Mam|LINE|CR1 93245 NM_001243270 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr21-1644 chr21 23853829 23854039 + 7.07 0.000 Intergenic L2c|LINE|L2 467443 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr2-7439 chr2 11397556 11397766 + 7.07 0.000 intron (NR_047499, intron 1 of 2) ERV3-16A3_I-int|LTR|ERVL 3680 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA chr1-16452 chr1 227485689 227485899 + 7.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR -77762 NM_178549 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr3-5621 chr3 9892702 9892912 + 7.07 0.000 intron (NM_032492, intron 1 of 1) L2c|LINE|L2 2197 NM_032492 84522 Hs.24054 NM_032492 ENSG00000171135 JAGN1 GL009|SCN6 jagunal homolog 1 protein-coding chr7-9587 chr7 147611049 147611259 + 7.07 0.000 intron (NM_014141, intron 11 of 22) intron (NM_014141, intron 11 of 22) -60525 NR_133929 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr3-6608 chr3 126346661 126346871 + 7.07 0.000 intron (NM_014079, intron 2 of 2) intron (NM_014079, intron 2 of 2) 10642 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr11-9902 chr11 74942498 74942708 + 7.07 0.000 intron (NM_001270380, intron 2 of 14) intron (NM_001270380, intron 2 of 14) 6488 NM_001270380 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr20-3078 chr20 16258632 16258842 + 7.07 0.000 Intergenic Intergenic -272855 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr1-13597 chr1 9257269 9257479 + 7.07 0.000 intron (NM_001282587, intron 3 of 4) AluJb|SINE|Alu 17527 NM_001282587 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr11-8138 chr11 49477406 49477616 + 7.07 0.000 Intergenic Intergenic -81017 NR_027044 440040 Hs.655746 NR_027044 ENSG00000205035 LOC440040 - glutamate metabotropic receptor 5 pseudogene pseudo chr1-13239 chr1 218734943 218735153 + 7.07 0.000 intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 183463 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chr11-4708 chr11 67057344 67057554 + 7.07 0.000 intron (NM_001300886, intron 1 of 2) MIR|SINE|MIR 602 NM_001300886 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr3-9683 chr3 64232120 64232330 + 7.07 0.000 intron (NM_001370528, intron 1 of 7) intron (NM_001370528, intron 1 of 7) -6759 NM_198859 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr6-6071 chr6 139965264 139965474 + 7.07 0.000 Intergenic Intergenic -10950 NR_121622 100507477 Hs.179213 NR_121622 ENSG00000236013 LOC100507477 - uncharacterized LOC100507477 ncRNA chr1-16108 chr1 204211182 204211392 + 7.07 0.000 intron (NM_198447, intron 1 of 4) L2b|LINE|L2 2701 NM_198447 127845 Hs.532401 NM_198447 ENSG00000174567 GOLT1A CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b golgi transport 1A protein-coding chr7-5928 chr7 99281042 99281252 + 7.07 0.000 intron (NR_002147, intron 4 of 15) MIRc|SINE|MIR 7846 NR_002147 84176 Hs.621401 NR_002147 MYH16 MHC20|MYH16P|MYH5 myosin heavy chain 16 pseudogene pseudo chr4-6300 chr4 84536178 84536388 + 7.07 0.000 Intergenic L1MC4|LINE|L1 -38049 NM_006168 4825 Hs.546270 NM_006168 ENSG00000163623 NKX6-1 NKX6.1|NKX6A NK6 homeobox 1 protein-coding chr6-5982 chr6 89297803 89298013 + 7.07 0.000 intron (NM_002043, intron 2 of 8) intron (NM_002043, intron 2 of 8) 17391 NM_002043 2570 Hs.379330 NM_002043 ENSG00000111886 GABRR2 - gamma-aminobutyric acid type A receptor rho2 subunit protein-coding chr9-7893 chr9 88054903 88055113 + 7.07 0.000 Intergenic Intergenic 22892 NR_135137 102724156 Hs.633031 NR_135137 LOC102724156 - uncharacterized LOC102724156 ncRNA chr1-7926 chr1 163162414 163162624 + 7.07 0.000 intron (NM_001254749, intron 2 of 4) intron (NM_001254749, intron 2 of 4) 844 NR_110699 101928404 Hs.683933 NR_110699 ENSG00000232892 LOC101928404 - uncharacterized LOC101928404 ncRNA chr1-15760 chr1 173284220 173284430 + 7.07 0.000 intron (NR_037845, intron 2 of 2) intron (NR_037845, intron 2 of 2) -76994 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr22-2048 chr22 43420324 43420534 + 7.07 0.000 intron (NM_001362786, intron 1 of 6) AluSx1|SINE|Alu 3877 NM_001362786 758 Hs.159538 NM_001044370 ENSG00000186732 MPPED1 239AB|C22orf1|FAM1A metallophosphoesterase domain containing 1 protein-coding chr20-850 chr20 44652083 44652293 + 7.07 0.000 promoter-TSS (NM_000022) promoter-TSS (NM_000022) -430 NM_001322051 100 Hs.654536 NM_000022 ENSG00000196839 ADA - adenosine deaminase protein-coding chr14-1505 chr14 51310600 51310810 + 7.07 0.000 intron (NR_145423, intron 1 of 1) intron (NR_145423, intron 1 of 1) 17680 NR_145423 161342 NR_145423 ENSG00000258955 LINC00519 C14orf30|c14_5317 long intergenic non-protein coding RNA 519 ncRNA chr22-3511 chr22 49399651 49399861 + 7.07 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 143710 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr15-4488 chr15 50869816 50870026 + 7.07 0.000 Intergenic Intergenic -38762 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr2-9552 chr2 239678796 239679006 + 7.07 0.000 Intergenic Intergenic -83959 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr4-7017 chr4 25002953 25003163 + 7.07 0.000 3' UTR (NM_018176, exon 8 of 8) 3' UTR (NM_018176, exon 8 of 8) -22854 NM_173463 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr6-5414 chr6 155926844 155927054 + 7.07 0.000 Intergenic L1MB8|LINE|L1 -19848 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr19-5187 chr19 12256460 12256670 + 7.07 0.000 Intergenic LTR53-int|LTR|ERVL 38047 NM_001353551 51710 Hs.296731 NM_016264 ENSG00000197857 ZNF44 GIOT-2|KOX7|ZNF|ZNF504|ZNF55|ZNF58 zinc finger protein 44 protein-coding chr22-3111 chr22 17007646 17007856 + 7.07 0.000 intron (NM_001037814, intron 1 of 9) CpG 471 NM_001366857 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2 associated binding protein family member 4 protein-coding chr20-2297 chr20 5526168 5526378 + 7.07 0.000 Intergenic Intergenic -16271 NR_109860 101929207 Hs.516871 NR_109860 ENSG00000225640 LINC01729 - long intergenic non-protein coding RNA 1729 ncRNA chr17-8362 chr17 74258265 74258475 + 7.07 0.000 intron (NM_001330453, intron 13 of 13) AluSq|SINE|Alu 10004 NM_052869 94015 Hs.27935 NM_032646 ENSG00000141540 TTYH2 C17orf29 tweety family member 2 protein-coding chr7-7699 chr7 156998530 156998740 + 7.07 0.000 Intergenic L1MA2|LINE|L1 -7672 NR_147077 105375606 Hs.606605 NR_147077 ENSG00000235029 MNX1-AS2 - MNX1 antisense RNA 2 ncRNA chrX-4872 chrX 105703907 105704117 + 7.07 0.000 intron (NM_017416, intron 6 of 10) L2b|LINE|L2 -118527 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr4-6903 chr4 14764173 14764383 + 7.07 0.000 intron (NR_126435, intron 2 of 6) MLT1J|LTR|ERVL-MaLR 123891 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr13-3230 chr13 27783753 27783963 + 7.07 0.000 Intergenic Intergenic -8625 NM_145657 219409 Hs.351785 NM_145657 ENSG00000169840 GSX1 GSH1|Gsh-1 GS homeobox 1 protein-coding chr6-5097 chr6 119287085 119287295 + 7.07 0.000 intron (NM_005907, intron 5 of 12) intron (NM_005907, intron 5 of 12) 62571 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chr1-12376 chr1 3925713 3925923 + 7.07 0.000 Intergenic Intergenic -14794 NR_040065 728716 Hs.668359 NR_040065 LINC01346 - long intergenic non-protein coding RNA 1346 ncRNA chr6-1522 chr6 24360001 24360211 + 7.07 0.000 intron (NM_001195610, intron 1 of 10) CpG -2047 NM_016356 51473 Hs.61345 NM_016356 ENSG00000146038 DCDC2 DCDC2A|DFNB66|NPHP19|NSC|RU2|RU2S doublecortin domain containing 2 protein-coding chr10-3153 chr10 72076617 72076827 + 7.07 0.000 intron (NM_014767, intron 2 of 11) intron (NM_014767, intron 2 of 11) 11829 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr1-13960 chr1 24633013 24633223 + 7.07 0.000 Intergenic MIRc|SINE|MIR -10184 NM_001366588 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr3-7061 chr3 176041131 176041341 + 7.07 0.000 Intergenic L2a|LINE|L2 -203315 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA chr19-6475 chr19 17419263 17419473 + 7.07 0.000 promoter-TSS (NM_138401) promoter-TSS (NM_138401) -679 NM_138401 93343 Hs.515243 NM_138401 ENSG00000141971 MVB12A CFBP|FAM125A multivesicular body subunit 12A protein-coding chr4-5023 chr4 139738081 139738291 + 7.07 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 72367 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chrX-1717 chrX 23323353 23323563 + 7.07 0.000 Intergenic Intergenic -11391 NM_173495 139411 Hs.319503 NM_173495 ENSG00000165186 PTCHD1 AUTSX4 patched domain containing 1 protein-coding chr3-10355 chr3 128046307 128046517 + 7.07 0.000 Intergenic Intergenic -6025 NM_013336 29927 Hs.518236 NM_013336 ENSG00000058262 SEC61A1 HNFJ4|HSEC61|SEC61|SEC61A SEC61 translocon alpha 1 subunit protein-coding chr11-5818 chr11 7485527 7485737 + 7.07 0.000 promoter-TSS (NM_001370501) promoter-TSS (NM_001370501) 126 NM_001370500 283298 Hs.503500 NM_198474 ENSG00000183801 OLFML1 MVAL564|UNQ564 olfactomedin like 1 protein-coding chr2-10114 chr2 62331283 62331493 + 7.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 115867 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chrX-2725 chrX 124059673 124059883 + 7.07 0.000 intron (NM_006603, intron 14 of 32) AluJo|SINE|Alu 98072 NM_001042751 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr2-11662 chr2 7206306 7206516 + 7.07 0.000 Intergenic MIRc|SINE|MIR -128531 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr4-6324 chr4 89433544 89433754 + 7.07 0.000 Intergenic L2b|LINE|L2 -125849 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr1-10301 chr1 150706075 150706285 + 7.07 0.000 intron (NM_032132, intron 10 of 14) L3|LINE|CR1 -9026 NM_018178 55204 Hs.203699 NM_018178 ENSG00000143457 GOLPH3L GPP34R golgi phosphoprotein 3 like protein-coding chr12-6450 chr12 91741485 91741695 + 7.07 0.000 Intergenic Intergenic 400123 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr5-3941 chr5 939425 939635 + 7.07 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 46646 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr14-3787 chr14 58275771 58275981 + 7.07 0.000 intron (NR_029435, intron 2 of 3) L1ME1|LINE|L1 -12157 NR_146595 55451 NR_146595 ENSG00000279636 LINC00216 C14orf107|NCRNA00216|PRO1617 long intergenic non-protein coding RNA 216 ncRNA chrX-2456 chrX 82003806 82004016 + 7.07 0.000 Intergenic L1P3|LINE|L1 801809 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr3-7849 chr3 115382000 115382210 + 7.07 0.000 Intergenic Intergenic -234817 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr2-12358 chr2 51267277 51267487 + 7.07 0.000 intron (NR_135237, intron 2 of 10) intron (NR_135237, intron 2 of 10) 234781 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr5-7938 chr5 79574242 79574452 + 7.07 0.000 Intergenic LTR49-int|LTR|ERV1 -38070 NM_001114394 167153 Hs.418198 NM_173797 ENSG00000164329 TENT2 APD4|GLD2|PAPD4|TUT2 terminal nucleotidyltransferase 2 protein-coding chr8-5637 chr8 104991028 104991238 + 7.07 0.000 Intergenic Intergenic -327305 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr10-5950 chr10 122139569 122139779 + 7.07 0.000 intron (NM_001291876, intron 6 of 19) intron (NM_001291876, intron 6 of 19) -23956 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr2-11682 chr2 8022042 8022252 + 7.07 0.000 intron (NR_034135, intron 8 of 8) intron (NR_034135, intron 8 of 8) -45333 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr1-10247 chr1 117731928 117732138 + 7.07 0.000 Intergenic L2|LINE|L2 125985 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr6-2629 chr6 154613312 154613522 + 7.07 0.000 Intergenic L2c|LINE|L2 -102732 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr2-10390 chr2 178327998 178328208 + 7.07 0.000 intron (NM_001201480, intron 4 of 25) intron (NM_001201480, intron 4 of 25) 7861 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr13-1490 chr13 111031599 111031809 + 7.07 0.000 Intergenic Intergenic -64134 NR_120415 101927802 Hs.559193 NR_120415 LINC00368 - long intergenic non-protein coding RNA 368 ncRNA chr7-7610 chr7 132139492 132139702 + 7.07 0.000 intron (NM_020911, intron 30 of 31) MER91A|DNA|hAT-Tip100 -121264 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr8-5140 chr8 72850999 72851209 + 7.07 0.000 intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) 119059 NR_110656 101926908 Hs.680588 NR_110656 ENSG00000253726 LOC101926908 - uncharacterized LOC101926908 ncRNA chr9-4078 chr9 125387739 125387949 + 7.07 0.000 Intergenic LTR33C|LTR|ERVL 126018 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr19-6483 chr19 17581440 17581650 + 7.07 0.000 3' UTR (NM_024656, exon 12 of 12) 3' UTR (NM_024656, exon 12 of 12) 25896 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr9-5316 chr9 86718780 86718990 + 7.07 0.000 Intergenic Intergenic 228621 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr14-4011 chr14 41837406 41837616 + 7.07 0.000 intron (NM_001330106, intron 2 of 4) intron (NM_001330106, intron 2 of 4) 230655 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr7-7339 chr7 48828593 48828803 + 7.07 0.000 Intergenic Intergenic -95849 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr10-7971 chr10 58327222 58327432 + 7.07 0.000 non-coding (NR_158219, exon 1 of 1) non-coding (NR_158219, exon 1 of 1) 2352 NR_158219 112268068 Hs.586671 NR_158219 LOC112268068 - uncharacterized LOC112268068 ncRNA chr16-2978 chr16 14302079 14302289 + 7.07 0.000 promoter-TSS (NR_132984) promoter-TSS (NR_132984) -104 NR_132983 100129781 Hs.190748 NR_132983 MIR193BHG - MIR193B host gene ncRNA chr10-8318 chr10 78645472 78645682 + 7.07 0.000 Intergenic Intergenic 378235 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr11-9081 chr11 30654760 30654970 + 7.07 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -68512 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr16-6657 chr16 68986087 68986297 + 7.07 0.000 intron (NM_024562, intron 15 of 17) intron (NM_024562, intron 15 of 17) -119461 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr2-3673 chr2 180961215 180961425 + 7.07 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -19065 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr2-7574 chr2 25098266 25098476 + 7.07 0.000 intron (NM_014971, intron 3 of 22) intron (NM_014971, intron 3 of 22) 55908 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr14-2829 chr14 24435428 24435638 + 7.07 0.000 intron (NM_001290256, intron 5 of 7) intron (NM_001290256, intron 5 of 7) 5579 NM_015299 23351 Hs.713590 NM_015299 ENSG00000100441 KHNYN KIAA0323 KH and NYN domain containing protein-coding chr2-11593 chr2 2159483 2159693 + 7.07 0.000 intron (NM_015025, intron 3 of 24) intron (NM_015025, intron 3 of 24) -159644 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr14-2402 chr14 55802517 55802727 + 7.07 0.000 Intergenic Intergenic -5948 NR_026796 645687 Hs.569345 NR_026796 ENSG00000258791 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA chrX-1873 chrX 121147509 121147719 + 7.07 0.000 Intergenic Intergenic 100004 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chr15-4226 chr15 27117121 27117331 + 7.07 0.000 intron (NM_001270873, intron 3 of 5) intron (NM_001270873, intron 3 of 5) 44093 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr11-7606 chr11 45450137 45450347 + 7.07 0.000 Intergenic L3|LINE|CR1 78845 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr2-7420 chr2 9832630 9832840 + 7.07 0.000 Intergenic L2|LINE|L2 -10707 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr1-9713 chr1 52845742 52845952 + 7.07 0.000 intron (NM_001307931, intron 1 of 12) AluJr|SINE|Alu 3087 NM_001004339 440590 Hs.658458 NM_001004339 ENSG00000203995 ZYG11A ZYG11 zyg-11 family member A, cell cycle regulator protein-coding chr21-1287 chr21 41085758 41085968 + 7.07 0.000 Intergenic AluY|SINE|Alu 62201 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chrX-4943 chrX 111467410 111467620 + 7.07 0.000 Intergenic Intergenic -44130 NM_001354473 401613 Hs.98581 NM_001354473 ENSG00000260802 SERTM2 DKFZp686D0853|LINC00890 serine rich and transmembrane domain containing 2 protein-coding chr2-12834 chr2 95838156 95838366 + 7.07 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -11280 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr17-7343 chr17 6282216 6282426 + 7.07 0.000 Intergenic MIRc|SINE|MIR 152800 NM_001285399 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr12-4301 chr12 124417344 124417554 + 7.07 0.000 intron (NM_001077261, intron 15 of 47) intron (NM_001077261, intron 15 of 47) -80207 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr7-4429 chr7 107995260 107995470 + 7.07 0.000 intron (NM_002291, intron 4 of 33) intron (NM_002291, intron 4 of 33) 7796 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr22-3023 chr22 26202542 26202752 + 7.07 0.000 intron (NM_001184776, intron 1 of 14) intron (NM_001184776, intron 1 of 14) 33173 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr12-5928 chr12 71108214 71108424 + 7.07 0.000 Intergenic Intergenic 49490 NM_001369760 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr12-7786 chr12 96770415 96770625 + 7.07 0.000 intron (NM_001306084, intron 60 of 67) L1M6|LINE|L1 -136737 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr13-2935 chr13 25927405 25927615 + 7.07 0.000 intron (NM_016529, intron 33 of 36) intron (NM_016529, intron 33 of 36) 123550 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr5-7961 chr5 81352641 81352851 + 7.07 0.000 intron (NM_130767, intron 5 of 14) L1MA2|LINE|L1 41388 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr1-9661 chr1 48086188 48086398 + 7.07 0.000 Intergenic LTR78B|LTR|ERV1 -88908 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr14-5051 chr14 81461401 81461611 + 7.07 0.000 Intergenic Intergenic -11349 NR_109999 100506700 Hs.116304 NR_109999 ENSG00000258675 LINC02308 - long intergenic non-protein coding RNA 2308 ncRNA chr1-10253 chr1 118276073 118276283 + 7.07 0.000 Intergenic L1MA10|LINE|L1 -90950 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr11-10595 chr11 123943214 123943424 + 7.07 0.000 exon (NM_001005187, exon 1 of 1) exon (NM_001005187, exon 1 of 1) 519 NM_001005187 219874 Hs.553638 NM_001005187 ENSG00000181499 OR6T1 OR11-277 olfactory receptor family 6 subfamily T member 1 protein-coding chr1-15281 chr1 115438686 115438896 + 7.07 0.000 Intergenic Intergenic -100555 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr10-4321 chr10 22618161 22618371 + 7.07 0.000 intron (NM_005028, intron 1 of 9) intron (NM_005028, intron 1 of 9) 95842 NM_001330062 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr11-8161 chr11 61124295 61124505 + 7.07 0.000 intron (NM_001346456, intron 8 of 10) MER103C|DNA|hAT-Charlie 21911 NM_014207 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr5-3531 chr5 12496921 12497131 + 7.07 0.000 Intergenic L1MA6|LINE|L1 -77831 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA chr2-6583 chr2 230472574 230472784 + 7.07 0.000 intron (NM_001080391, intron 15 of 28) intron (NM_001080391, intron 15 of 28) 55923 NM_001206704 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chrX-2006 chrX 14616207 14616417 + 7.07 0.000 intron (NM_002063, intron 7 of 8) intron (NM_002063, intron 7 of 8) 86776 NM_001118886 2742 Hs.2700 NM_002063 ENSG00000101958 GLRA2 GLR glycine receptor alpha 2 protein-coding chr2-8581 chr2 137514592 137514802 + 7.07 0.000 intron (NM_001316349, intron 15 of 27) HERVL-int|LTR|ERVL 413235 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr18-1719 chr18 3154926 3155136 + 7.07 0.000 exon (NM_003803, exon 11 of 38) exon (NM_003803, exon 11 of 38) 64937 NM_019856 8736 Hs.464469 NM_003803 ENSG00000101605 MYOM1 SKELEMIN myomesin 1 protein-coding chr15-3726 chr15 53431682 53431892 + 7.07 0.000 Intergenic HERVH-int|LTR|ERV1 109065 NR_102336 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr19-5464 chr19 35419612 35419822 + 7.07 0.000 Intergenic AluSz|SINE|Alu 14110 NR_040046 100128682 Hs.570008 NR_040046 ENSG00000205786 LINC01531 - long intergenic non-protein coding RNA 1531 ncRNA chr6-1929 chr6 52361997 52362207 + 7.07 0.000 promoter-TSS (NM_133367) promoter-TSS (NM_133367) -49 NM_133367 85315 Hs.239388 NM_133367 ENSG00000170915 PAQR8 C6orf33|LMPB1|MPRB progestin and adipoQ receptor family member 8 protein-coding chr8-2950 chr8 39995909 39996119 + 7.07 0.000 intron (NM_194294, intron 8 of 10) intron (NM_194294, intron 8 of 10) 61059 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr2-13295 chr2 129355110 129355320 + 7.07 0.000 Intergenic Intergenic -81324 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr3-10547 chr3 140597750 140597960 + 7.07 0.000 Intergenic Intergenic -80209 NM_152616 287015 Hs.343487 NM_152616 ENSG00000155890 TRIM42 PPP1R40|T4A1 tripartite motif containing 42 protein-coding chr14-5040 chr14 80136641 80136851 + 7.07 0.000 Intergenic LTR18A|LTR|ERVL -74673 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chr3-8339 chr3 73073159 73073369 + 7.07 0.000 Intergenic MIR|SINE|MIR 11605 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr2-10152 chr2 78498015 78498225 + 7.07 0.000 Intergenic L1PA13|LINE|L1 -47411 NR_136311 105374820 Hs.570225 NR_136311 LOC105374820 - uncharacterized LOC105374820 ncRNA chr1-8285 chr1 40049791 40050001 + 7.07 0.000 intron (NM_001350484, intron 2 of 13) intron (NM_001350484, intron 2 of 13) 9045 NM_001350481 10487 Hs.370581 NM_006367 ENSG00000131236 CAP1 CAP|CAP1-PEN cyclase associated actin cytoskeleton regulatory protein 1 protein-coding chr19-4467 chr19 5260801 5261011 + 7.07 0.000 intron (NM_002850, intron 6 of 37) intron (NM_002850, intron 6 of 37) 79906 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr18-2926 chr18 13235082 13235292 + 7.07 0.000 intron (NM_181482, intron 1 of 5) AluSp|SINE|Alu -4356 NR_146617 147276 Hs.675872 NR_146617 ENSG00000279020 C18orf15 HsT3231 chromosome 18 open reading frame 15 (putative) ncRNA chr14-3107 chr14 65276821 65277031 + 7.07 0.000 Intergenic Intergenic -54579 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr17-5637 chr17 49692760 49692970 + 7.07 0.000 Intergenic Intergenic -14702 NM_001007226 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding chr11-8987 chr11 22466598 22466808 + 7.07 0.000 intron (NR_120583, intron 3 of 3) intron (NR_120583, intron 3 of 3) 25316 NR_120583 102723378 Hs.374255 NR_120583 ENSG00000255323 LINC01495 - long intergenic non-protein coding RNA 1495 ncRNA chr19-2935 chr19 3896293 3896503 + 7.07 0.000 intron (NM_033064, intron 2 of 12) AluSx|SINE|Alu 15713 NM_033064 85300 Hs.418055 NM_033064 ENSG00000167654 ATCAY BNIP-H|CLAC ATCAY kinesin light chain interacting caytaxin protein-coding chr21-1971 chr21 46539022 46539232 + 7.07 0.000 intron (NM_001146115, intron 15 of 19) intron (NM_001146115, intron 15 of 19) 65955 NM_006272 6285 Hs.422181 NM_006272 ENSG00000160307 S100B NEF|S100|S100-B|S100beta S100 calcium binding protein B protein-coding chr10-7041 chr10 80649725 80649935 + 7.07 0.000 promoter-TSS (NR_155749) promoter-TSS (NR_155749) 33 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr12-6685 chr12 3321481 3321691 + 7.07 0.000 intron (NR_148995, intron 1 of 11) intron (NR_148995, intron 1 of 11) 44536 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr11-5411 chr11 67862373 67862583 + 7.07 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -57142 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr8-4539 chr8 123685068 123685278 + 7.07 0.000 intron (NM_001003954, intron 10 of 11) L3b|LINE|CR1 -31372 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr19-7045 chr19 51117581 51117791 + 7.07 0.000 Intergenic L1ME3A|LINE|L1 -7194 NM_001198558 27180 Hs.245828 NM_014441 ENSG00000129450 SIGLEC9 CD329|CDw329|FOAP-9|OBBP-LIKE|siglec-9 sialic acid binding Ig like lectin 9 protein-coding chr4-7409 chr4 65035886 65036096 + 7.07 0.000 Intergenic Intergenic -31491 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr9-7517 chr9 33334065 33334275 + 7.07 0.000 intron (NM_002504, intron 11 of 23) intron (NM_002504, intron 11 of 23) 43654 NM_147134 4799 Hs.413074 NM_002504 ENSG00000086102 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding chr8-6902 chr8 101717016 101717226 + 7.07 0.000 intron (NM_001040624, intron 6 of 7) MLT1D|LTR|ERVL-MaLR 73848 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr7-8464 chr7 48319194 48319404 + 7.07 0.000 intron (NM_152701, intron 27 of 61) intron (NM_152701, intron 27 of 61) 147841 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr3-9055 chr3 24363383 24363593 + 7.07 0.000 intron (NM_001354709, intron 1 of 10) intron (NM_001354709, intron 1 of 10) -130599 NR_046244 644990 Hs.631912 NR_046244 THRB-AS1 - THRB antisense RNA 1 ncRNA chr2-13686 chr2 164280549 164280759 + 7.07 0.000 Intergenic L1MA6|LINE|L1 287841 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr7-5183 chr7 8136660 8136870 + 7.07 0.000 intron (NM_001350836, intron 13 of 14) intron (NM_001350836, intron 13 of 14) 125287 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr2-10284 chr2 129487976 129488186 + 7.07 0.000 Intergenic Intergenic -214190 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr11-8389 chr11 93083670 93083880 + 7.07 0.000 Intergenic MIR|SINE|MIR 113651 NM_001286139 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr3-6862 chr3 151015512 151015722 + 7.07 0.000 intron (NR_024066, intron 1 of 5) L2c|LINE|L2 -42618 NM_001195794 7401 Hs.745448 NM_052995 ENSG00000163646 CLRN1 RP61|USH3|USH3A clarin 1 protein-coding chr18-2910 chr18 12056743 12056953 + 7.07 0.000 Intergenic Intergenic -36995 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chrX-1766 chrX 64980848 64981058 + 7.07 0.000 intron (NM_001178032, intron 1 of 4) L2a|LINE|L2 -4420 NM_001178033 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr12-7218 chr12 50424954 50425164 + 7.07 0.000 intron (NM_001352316, intron 2 of 15) AluSx1|SINE|Alu 23652 NM_001352314 113251 Hs.26613 NM_052879 ENSG00000161813 LARP4 PP13296 La ribonucleoprotein domain family member 4 protein-coding chr1-7710 chr1 25232254 25232464 + 7.07 0.000 intron (NM_207170, intron 1 of 5) CpG-677 143 NM_015484 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr17-8093 chr17 55588870 55589080 + 7.07 0.000 Intergenic Intergenic 133889 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr8-5090 chr8 48419316 48419526 + 7.07 0.000 Intergenic Intergenic -132146 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr1-16154 chr1 205805243 205805453 + 7.07 0.000 intron (NM_173854, intron 2 of 10) intron (NM_173854, intron 2 of 10) 7850 NM_173854 254428 Hs.20274 NM_173854 ENSG00000133065 SLC41A1 MgtE solute carrier family 41 member 1 protein-coding chr20-3169 chr20 42192573 42192783 + 7.07 0.000 intron (NM_133170, intron 17 of 31) intron (NM_133170, intron 17 of 31) -492805 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr3-9660 chr3 61774381 61774591 + 7.07 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 212915 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr13-1894 chr13 43054889 43055099 + 7.07 0.000 intron (NM_013238, intron 1 of 5) LTR19C|LTR|ERV1 31408 NM_013238 29103 Hs.438830 NM_013238 ENSG00000120675 DNAJC15 DNAJD1|HSD18|MCJ DnaJ heat shock protein family (Hsp40) member C15 protein-coding chr14-4552 chr14 44573825 44574035 + 7.07 0.000 Intergenic L1PB1|LINE|L1 66521 NR_135257 105370473 Hs.180134 NR_135257 ENSG00000258747 LOC105370473 - uncharacterized LOC105370473 ncRNA chr6-6253 chr6 34011335 34011545 + 7.07 0.000 Intergenic L1MEc|LINE|L1 -11389 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr1-10424 chr1 158101318 158101528 + 7.07 0.000 Intergenic Intergenic 39217 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr6-5917 chr6 54343907 54344117 + 7.07 0.000 intron (NM_014464, intron 5 of 10) intron (NM_014464, intron 5 of 10) 35571 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr4-2518 chr4 38935242 38935452 + 7.07 0.000 intron (NM_001350633, intron 10 of 12) MIRb|SINE|MIR 67315 NR_030300 693159 NR_030300 ENSG00000207944 MIR574 MIR574-3p|MIRN574|hsa-mir-574|mir-574 microRNA 574 ncRNA chr1-16392 chr1 223194363 223194573 + 7.07 0.000 Intergenic MSTD|LTR|ERVL-MaLR -51220 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr5-3675 chr5 171479649 171479859 + 7.07 0.000 Intergenic Intergenic 60107 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr14-5396 chr14 104118862 104119072 + 7.07 0.000 Intergenic Intergenic -1464 NR_039859 100616173 NR_039859 ENSG00000283165 MIR203B MIR3545|hsa-mir-203b microRNA 203b ncRNA chr4-4991 chr4 135722030 135722240 + 7.07 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 165958 NR_103762 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chrX-4139 chrX 28145667 28145877 + 7.07 0.000 Intergenic AluJr|SINE|Alu -164323 NM_001017930 139425 Hs.447365 NM_001017930 ENSG00000226372 DCAF8L1 WDR42B DDB1 and CUL4 associated factor 8 like 1 protein-coding chr1-6426 chr1 15785671 15785881 + 7.07 0.000 3' UTR (NM_017556, exon 9 of 9) 3' UTR (NM_017556, exon 9 of 9) 21277 NM_001024215 54751 Hs.530101 NM_017556 ENSG00000162458 FBLIM1 CAL|FBLP-1|FBLP1 filamin binding LIM protein 1 protein-coding chr9-5239 chr9 77751102 77751312 + 7.07 0.000 intron (NM_002072, intron 5 of 6) intron (NM_002072, intron 5 of 6) -102885 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr12-7239 chr12 51468804 51469014 + 7.07 0.000 intron (NM_001039960, intron 11 of 24) intron (NM_001039960, intron 11 of 24) 43792 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr5-5551 chr5 147898909 147899119 + 7.07 0.000 intron (NM_206966, intron 2 of 3) intron (NM_206966, intron 2 of 3) 7524 NM_206966 389336 Hs.660038 NM_206966 ENSG00000178776 C5orf46 SSSP1 chromosome 5 open reading frame 46 protein-coding chr9-7234 chr9 2254796 2255006 + 7.07 0.000 Intergenic Intergenic 96445 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr1-13902 chr1 22086687 22086897 + 7.07 0.000 exon (NM_001791, exon 5 of 6) exon (NM_001791, exon 5 of 6) 34083 NM_044472 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr3-3063 chr3 128742767 128742977 + 7.07 0.000 intron (NM_004637, intron 1 of 5) LTR12C|LTR|ERV1 16736 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr9-6498 chr9 98607818 98608028 + 7.07 0.000 intron (NM_005458, intron 1 of 18) intron (NM_005458, intron 1 of 18) 101012 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr5-8175 chr5 104564046 104564256 + 7.07 0.000 Intergenic Intergenic -535323 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr3-9546 chr3 52905258 52905468 + 7.07 0.000 intron (NM_016329, intron 20 of 20) intron (NM_016329, intron 20 of 20) -7815 NM_198563 375346 Hs.744189 NM_198563 ENSG00000213533 STIMATE TMEM110 STIM activating enhancer protein-coding chr22-3846 chr22 32403559 32403769 + 7.07 0.000 intron (NM_014306, intron 4 of 11) AluJr|SINE|Alu 8583 NM_014306 51493 Hs.474643 NM_014306 ENSG00000100220 RTCB C22orf28|DJ149A16.6|FAAP|HSPC117 RNA 2',3'-cyclic phosphate and 5'-OH ligase protein-coding chr1-10846 chr1 204399857 204400067 + 7.07 0.000 Intergenic Intergenic 11855 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr22-1889 chr22 44742968 44743178 + 7.07 0.000 intron (NM_181334, intron 4 of 14) intron (NM_181334, intron 4 of 14) -9485 NM_001017526 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr5-4687 chr5 38860986 38861196 + 7.07 0.000 intron (NM_003999, intron 1 of 17) L1MA4A|LINE|L1 15079 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr1-16286 chr1 214292354 214292564 + 7.07 0.000 intron (NM_020197, intron 1 of 11) L2c|LINE|L2 11300 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chrX-3120 chrX 8167788 8167998 + 7.07 0.000 Intergenic Intergenic 3374 NM_016378 51480 Hs.279737 NM_016378 ENSG00000177504 VCX2 VCX-2r|VCX2R|VCXB variable charge X-linked 2 protein-coding chr10-8014 chr10 62043126 62043336 + 7.07 0.000 intron (NM_032199, intron 4 of 9) intron (NM_032199, intron 4 of 9) -6126 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr8-5448 chr8 40951919 40952129 + 7.07 0.000 Intergenic LTR50|LTR|ERVL -54198 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr8-5913 chr8 17742728 17742938 + 7.07 0.000 intron (NM_001363057, intron 3 of 14) intron (NM_001363057, intron 3 of 14) -20258 NM_001166393 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr3-7915 chr3 140695728 140695938 + 7.07 0.000 intron (NM_152616, intron 4 of 4) intron (NM_152616, intron 4 of 4) 17769 NM_152616 287015 Hs.343487 NM_152616 ENSG00000155890 TRIM42 PPP1R40|T4A1 tripartite motif containing 42 protein-coding chr11-5197 chr11 12149814 12150024 + 7.07 0.000 intron (NR_144417, intron 2 of 26) intron (NR_144417, intron 2 of 26) 11529 NM_001282664 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr3-11131 chr3 187548107 187548317 + 7.07 0.000 Intergenic MIR|SINE|MIR 101166 NR_146716 105374261 Hs.535726 NR_146716 LINC02041 - long intergenic non-protein coding RNA 2041 ncRNA chr12-3072 chr12 9037232 9037442 + 7.07 0.000 Intergenic Intergenic 27733 NR_034140 253128 Hs.408739 NM_001039381 ENSG00000214851 LINC00612 C12orf33 long intergenic non-protein coding RNA 612 ncRNA chr12-2964 chr12 109889505 109889715 + 7.07 0.000 Intergenic MIRb|SINE|MIR -9069 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr2-14804 chr2 240887194 240887404 + 7.07 0.000 intron (NM_024861, intron 4 of 4) intron (NM_024861, intron 4 of 4) 4736 NM_024861 79919 Hs.193745 NM_024861 ENSG00000172478 MAB21L4 C2orf54 mab-21 like 4 protein-coding chr8-2760 chr8 115666352 115666562 + 7.07 0.000 intron (NM_014112, intron 1 of 6) intron (NM_014112, intron 1 of 6) 1556 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr7-3101 chr7 19106348 19106558 + 7.07 0.000 Intergenic CpG 11183 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr5-6289 chr5 115543581 115543791 + 7.07 0.000 intron (NM_020177, intron 1 of 2) intron (NM_020177, intron 1 of 2) 1089 NM_020177 56929 Hs.47367 NM_020177 ENSG00000145780 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog C protein-coding chr12-4675 chr12 47802624 47802834 + 7.07 0.000 intron (NM_015401, intron 1 of 25) intron (NM_015401, intron 1 of 25) 17174 NM_001368046 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr6-6938 chr6 15912229 15912439 + 7.07 0.000 Intergenic Intergenic -216752 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr8-3575 chr8 132328274 132328484 + 7.07 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 118883 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr5-2132 chr5 81165623 81165833 + 7.07 0.000 intron (NM_006909, intron 17 of 26) intron (NM_006909, intron 17 of 26) -67592 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr16-3872 chr16 70350240 70350450 + 7.07 0.000 intron (NM_018332, intron 1 of 11) intron (NM_018332, intron 1 of 11) 3442 NM_018332 55308 Hs.656037 NM_018332 ENSG00000168872 DDX19A DDX19-DDX19L|DDX19L DEAD-box helicase 19A protein-coding chr17-8192 chr17 62526954 62527164 + 7.07 0.000 intron (NM_006852, intron 6 of 21) L2a|LINE|L2 45946 NM_001284363 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr12-6895 chr12 22756711 22756921 + 7.07 0.000 Intergenic Intergenic 131645 NM_001039481 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr6-6929 chr6 15026832 15027042 + 7.07 0.000 Intergenic Intergenic -219132 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr2-8568 chr2 136151273 136151483 + 7.07 0.000 Intergenic Charlie25|DNA|hAT-Charlie -33223 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr2-8560 chr2 134478391 134478601 + 7.07 0.000 intron (NM_030923, intron 5 of 7) MSTB-int|LTR|ERVL-MaLR 224424 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr6-5182 chr6 130037205 130037415 + 7.07 0.000 intron (NM_001007102, intron 2 of 21) intron (NM_001007102, intron 2 of 21) 17666 NM_001346550 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr16-6176 chr16 25308950 25309160 + 7.07 0.000 Intergenic AluSx1|SINE|Alu -51210 NM_001012981 342357 Hs.513451 NM_001012981 ENSG00000155592 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding chr19-3808 chr19 5878195 5878405 + 7.07 0.000 Intergenic Intergenic -7760 NM_002034 2527 Hs.631843 NM_002034 ENSG00000130383 FUT5 FUC-TV fucosyltransferase 5 protein-coding chr11-9897 chr11 74729498 74729708 + 7.07 0.000 intron (NM_015424, intron 1 of 11) intron (NM_015424, intron 1 of 11) 1823 NM_015424 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr2-5294 chr2 69122379 69122589 + 7.07 0.000 intron (NM_032208, intron 10 of 17) intron (NM_032208, intron 10 of 17) 18802 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr18-2512 chr18 65415519 65415729 + 7.07 0.000 Intergenic Intergenic -334628 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr4-4257 chr4 20026629 20026839 + 7.07 0.000 Intergenic Intergenic -225171 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr3-10828 chr3 164149613 164149823 + 7.07 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 21838 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr2-12254 chr2 44755859 44756069 + 7.07 0.000 intron (NM_024766, intron 9 of 10) intron (NM_024766, intron 9 of 10) 182924 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr7-4991 chr7 157098797 157099007 + 7.07 0.000 Intergenic AluSx4|SINE|Alu -40024 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr17-6462 chr17 16459433 16459643 + 7.07 0.000 intron (NM_001113567, intron 2 of 3) L2a|LINE|L2 18312 NR_003054 692106 NR_003054 ENSG00000277512 SNORD65 HBII-135|SNORD65A small nucleolar RNA, C/D box 65 snoRNA chr4-7132 chr4 36798922 36799132 + 7.07 0.000 Intergenic L1MA3|LINE|L1 -157127 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA chr13-3590 chr13 28007317 28007527 + 7.07 0.000 intron (NM_004119, intron 23 of 23) AluJb|SINE|Alu -18785 NM_001105577 646625 Hs.705356 NM_001105577 ENSG00000183463 URAD PRHOXNB ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase protein-coding chr21-1204 chr21 44307555 44307765 + 7.07 0.000 intron (NM_001002021, intron 5 of 24) intron (NM_001002021, intron 5 of 24) 7607 NM_002626 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr2-8810 chr2 168769480 168769690 + 7.07 0.000 exon (NM_203463, exon 10 of 10) exon (NM_203463, exon 10 of 10) 16844 NR_045786 100861402 Hs.506829 NR_045786 ENSG00000227617 CERS6-AS1 - CERS6 antisense RNA 1 ncRNA chr2-9035 chr2 198300804 198301014 + 7.07 0.000 non-coding (NR_110267, exon 3 of 3) non-coding (NR_110267, exon 3 of 3) 74188 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr3-6314 chr3 77256625 77256835 + 7.07 0.000 intron (NM_001290039, intron 2 of 26) intron (NM_001290039, intron 2 of 26) 158718 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr6-5932 chr6 70085229 70085439 + 7.07 0.000 intron (NM_001858, intron 15 of 50) intron (NM_001858, intron 15 of 50) 197863 NM_078485 1297 Hs.590892 NM_001851 ENSG00000112280 COL9A1 DJ149L1.1.2|EDM6|MED|STL4 collagen type IX alpha 1 chain protein-coding chr5-7324 chr5 16194816 16195026 + 7.07 0.000 Intergenic L1PA11|LINE|L1 14680 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA chr13-4372 chr13 107639034 107639244 + 7.07 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) -107891 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA chr9-8303 chr9 114055081 114055291 + 7.07 0.000 3' UTR (NM_001318040, exon 14 of 14) 3' UTR (NM_001318040, exon 14 of 14) 23114 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr3-8962 chr3 15146114 15146324 + 7.07 0.000 Intergenic LTR5A|LTR|ERVK -47062 NR_126155 64145 Hs.475565 NM_022340 ENSG00000131381 RBSN Rabenosyn-5|ZFYVE20 rabenosyn, RAB effector protein-coding chr17-4183 chr17 12963621 12963831 + 7.07 0.000 intron (NR_135569, intron 16 of 17) MLT1G1|LTR|ERVL-MaLR -46384 NR_039747 100616494 NR_039747 ENSG00000265503 MIR1269B - microRNA 1269b ncRNA chr21-1666 chr21 26548554 26548764 + 7.07 0.000 intron (NR_135515, intron 2 of 3) intron (NR_135515, intron 2 of 3) 24627 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr10-8010 chr10 61976013 61976223 + 7.07 0.000 intron (NM_032199, intron 3 of 9) MER3|DNA|hAT-Charlie -73239 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr12-7812 chr12 99107950 99108160 + 7.07 0.000 intron (NM_152788, intron 15 of 25) MIRc|SINE|MIR 14696 NR_110095 101928937 Hs.555499 NR_110095 ENSG00000258039 LOC101928937 - uncharacterized LOC101928937 ncRNA chr3-3634 chr3 113233916 113234126 + 7.07 0.000 intron (NM_001301861, intron 2 of 19) intron (NM_001301861, intron 2 of 19) 21905 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr14-3835 chr14 74326954 74327164 + 7.07 0.000 Intergenic Intergenic -21412 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr21-1545 chr21 5226218 5226428 + 7.07 0.000 Intergenic MIRc|SINE|MIR -71665 NM_005049 5822 Hs.449076 NM_005049 ENSG00000241945 PWP2 EHOC-17|PWP2H|UTP1 PWP2 small subunit processome component protein-coding chr2-9027 chr2 197598296 197598506 + 7.07 0.000 intron (NM_144629, intron 7 of 8) intron (NM_144629, intron 7 of 8) 77186 NM_144629 130132 Hs.591615 NM_144629 ENSG00000162944 RFTN2 C2orf11|Raftlin-2 raftlin family member 2 protein-coding chr20-2290 chr20 4862978 4863188 + 7.07 0.000 intron (NM_005116, intron 13 of 16) intron (NM_005116, intron 13 of 16) -39475 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr12-5026 chr12 84995903 84996113 + 7.07 0.000 Intergenic LTR26|LTR|ERV1 40269 NM_001100917 144448 Hs.156962 NM_001100917 ENSG00000231738 TSPAN19 - tetraspanin 19 protein-coding chr18-3428 chr18 64017818 64018028 + 7.07 0.000 intron (NM_001348367, intron 7 of 7) intron (NM_001348367, intron 7 of 7) 47842 NM_001031848 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr9-4862 chr9 2303793 2304003 + 7.07 0.000 Intergenic Intergenic 145442 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr6-4658 chr6 51203554 51203764 + 7.07 0.000 Intergenic L4_A_Mam|LINE|RTE-X 384788 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr3-7536 chr3 183358814 183359024 + 7.07 0.000 intron (NM_015078, intron 3 of 29) AluJr|SINE|Alu 69350 NM_015078 23101 Hs.208267 NM_015078 ENSG00000053524 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding chr8-7092 chr8 118081332 118081542 + 7.07 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 30382 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr5-4884 chr5 66860524 66860734 + 7.07 0.000 intron (NM_015183, intron 1 of 27) intron (NM_015183, intron 1 of 27) 31856 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr1-13929 chr1 22828602 22828812 + 7.07 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 34519 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr11-10123 chr11 88420510 88420720 + 7.07 0.000 Intergenic Intergenic -82879 NM_148170 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding chr3-8468 chr3 124490963 124491173 + 7.07 0.000 intron (NM_001024660, intron 30 of 59) intron (NM_001024660, intron 30 of 59) -93590 NM_001322995 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr2-7845 chr2 47693943 47694153 + 7.07 0.000 Intergenic AluSx|SINE|Alu -89034 NM_001281492 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr2-9928 chr2 238624016 238624226 + 7.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR -68622 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr7-7347 chr7 51142996 51143206 + 7.07 0.000 intron (NM_015198, intron 5 of 12) intron (NM_015198, intron 5 of 12) 173708 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr1-14794 chr1 71118552 71118762 + 7.07 0.000 intron (NR_046217, intron 2 of 3) intron (NR_046217, intron 2 of 3) 37333 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr11-10153 chr11 92597343 92597553 + 7.07 0.000 intron (NM_001008781, intron 2 of 24) MIRb|SINE|MIR 245352 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr7-3924 chr7 128220769 128220979 + 7.07 0.000 Intergenic Intergenic 13002 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr1-15103 chr1 100020642 100020852 + 7.07 0.000 intron (NM_001271685, intron 7 of 7) intron (NM_001271685, intron 7 of 7) -17348 NM_033055 64645 Hs.124156 NM_033055 ENSG00000156875 MFSD14A HIAT1 major facilitator superfamily domain containing 14A protein-coding chr12-5061 chr12 90671980 90672190 + 7.07 0.000 Intergenic Intergenic -245938 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr7-9240 chr7 121141754 121141964 + 7.07 0.000 intron (NM_001105533, intron 14 of 17) intron (NM_001105533, intron 14 of 17) 152468 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr3-3901 chr3 45986583 45986793 + 7.07 0.000 intron (NM_024513, intron 1 of 17) intron (NM_024513, intron 1 of 17) 9136 NM_024513 79443 Hs.200227 NM_024513 ENSG00000163820 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding chr6-8464 chr6 154705616 154705826 + 7.07 0.000 Intergenic MER68|LTR|ERVL -27657 NM_001286189 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr3-7694 chr3 46812584 46812794 + 7.07 0.000 promoter-TSS (NR_160551) promoter-TSS (NR_160551) -115 NR_160551 729756 NR_160551 PRSS44P PRSS44|TESSP-4|TESSP4 serine protease 44, pseudogene pseudo chr16-6157 chr16 23408793 23409003 + 7.07 0.000 intron (NM_153603, intron 11 of 16) intron (NM_153603, intron 11 of 16) 44291 NM_153603 91949 Hs.185807 NM_153603 ENSG00000168434 COG7 CDG2E component of oligomeric golgi complex 7 protein-coding chr5-5240 chr5 118478500 118478710 + 7.07 0.000 intron (NR_104610, intron 4 of 9) L1PBa1|LINE|L1 83512 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chr2-6736 chr2 33091329 33091539 + 7.07 0.000 intron (NM_206943, intron 3 of 33) MIR3|SINE|MIR -43163 NM_000627 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr18-3220 chr18 47209210 47209420 + 7.07 0.000 intron (NM_001278063, intron 8 of 8) intron (NM_001278063, intron 8 of 8) -32951 NM_016097 51124 Hs.130917 NM_016097 ENSG00000134049 IER3IP1 HSPC039|MEDS|PRO2309 immediate early response 3 interacting protein 1 protein-coding chr6-6787 chr6 4067930 4068140 + 7.07 0.000 TTS (NM_173563) TTS (NM_173563) 11102 NM_173563 222826 Hs.657342 NM_173563 ENSG00000145975 FAM217A C6orf146 family with sequence similarity 217 member A protein-coding chr2-11765 chr2 12054404 12054614 + 7.07 0.000 intron (NR_110196, intron 2 of 5) MIRb|SINE|MIR 47393 NR_110196 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr13-2421 chr13 45219245 45219455 + 7.07 0.000 intron (NM_004128, intron 5 of 7) intron (NM_004128, intron 5 of 7) -18305 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr12-5189 chr12 104720325 104720535 + 7.07 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 128797 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr22-976 chr22 28020332 28020542 + 7.07 0.000 intron (NM_001145418, intron 13 of 22) intron (NM_001145418, intron 13 of 22) -99825 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr1-11335 chr1 26805221 26805431 + 7.07 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 17138 NM_001202554 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr17-8598 chr17 80673657 80673867 + 7.07 0.000 intron (NM_020761, intron 3 of 33) HSMAR2|DNA|TcMar-Mariner 128924 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr7-8286 chr7 39133148 39133358 + 7.07 0.000 intron (NM_001370959, intron 2 of 9) intron (NM_001370959, intron 2 of 9) -119686 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr14-3210 chr14 73797812 73798022 + 7.07 0.000 intron (NR_109995, intron 2 of 2) MIR3|SINE|MIR 10557 NR_109995 100506476 Hs.287299 NR_109995 LOC100506476 - uncharacterized LOC100506476 ncRNA chr13-1843 chr13 101473857 101474067 + 7.07 0.000 intron (NM_001271755, intron 2 of 9) L1MA3|LINE|L1 -15990 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr15-4796 chr15 72179894 72180104 + 7.07 0.000 intron (NM_001012642, intron 1 of 11) intron (NM_001012642, intron 1 of 11) 17788 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr2-12957 chr2 102726672 102726882 + 7.07 0.000 intron (NM_032718, intron 4 of 5) intron (NM_032718, intron 4 of 5) 10111 NR_136173 84804 Hs.590898 NM_032718 ENSG00000135953 MFSD9 - major facilitator superfamily domain containing 9 protein-coding chr2-10756 chr2 37365984 37366194 + 7.07 0.000 intron (NM_012413, intron 3 of 6) L2|LINE|L2 21459 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr8-5339 chr8 13717381 13717591 + 7.07 0.000 Intergenic Intergenic 87796 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr19-6675 chr19 35015310 35015520 + 7.07 0.000 intron (NM_001320036, intron 11 of 19) MLT1K|LTR|ERVL-MaLR -15055 NM_199037 6324 Hs.436646 NM_001037 ENSG00000105711 SCN1B ATFB13|BRGDA5|EIEE52|GEFSP1 sodium voltage-gated channel beta subunit 1 protein-coding chr10-6964 chr10 67746845 67747055 + 7.07 0.000 Intergenic L1PA10|LINE|L1 -50755 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chr19-4858 chr19 39100867 39101077 + 7.07 0.000 exon (NM_001004318, exon 8 of 13) exon (NM_001004318, exon 8 of 13) 16604 NM_001363687 390928 Hs.448934 NM_001004318 ENSG00000183760 ACP7 PAPL|PAPL1 acid phosphatase 7, tartrate resistant (putative) protein-coding chr1-7919 chr1 158730100 158730310 + 7.07 0.000 Intergenic L1ME1|LINE|L1 -12090 NM_001005327 391114 Hs.554488 NM_001005327 ENSG00000203757 OR6K3 OR1-18 olfactory receptor family 6 subfamily K member 3 protein-coding chr1-10441 chr1 159786838 159787048 + 7.07 0.000 Intergenic Intergenic 5981 NM_001319659 54935 Hs.425801 NM_017823 ENSG00000158716 DUSP23 DUSP25|LDP-3|LDP3|MOSP|VHZ dual specificity phosphatase 23 protein-coding chr8-3965 chr8 49076294 49076504 + 7.07 0.000 TTS (NM_001256596) TTS (NM_001256596) 4055 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr15-5232 chr15 96818686 96818896 + 7.07 0.000 Intergenic Intergenic 35356 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr22-3292 chr22 49812367 49812577 + 7.07 0.000 intron (NM_001304809, intron 2 of 12) AluSz6|SINE|Alu 11859 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr1-8182 chr1 19419409 19419619 + 7.07 0.000 intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 64781 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr3-2819 chr3 13402661 13402871 + 7.07 0.000 intron (NM_024923, intron 1 of 39) L1MC1|LINE|L1 17556 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr4-7074 chr4 31393690 31393900 + 7.07 0.000 Intergenic MER54B|LTR|ERVL -112749 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr1-11392 chr1 49051968 49052178 + 7.07 0.000 intron (NM_001323575, intron 4 of 12) intron (NM_001323575, intron 4 of 12) -205338 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr11-6073 chr11 33021718 33021928 + 7.07 0.000 intron (NM_139160, intron 1 of 8) intron (NM_139160, intron 1 of 8) 5641 NM_139160 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chr9-8368 chr9 117717057 117717267 + 7.07 0.000 3' UTR (NM_003266, exon 4 of 4) 3' UTR (NM_003266, exon 4 of 4) 12759 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr22-3464 chr22 42802103 42802313 + 7.07 0.000 intron (NM_001142293, intron 13 of 14) intron (NM_001142293, intron 13 of 14) 55065 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr6-4535 chr6 39835131 39835341 + 7.07 0.000 intron (NM_015345, intron 1 of 24) intron (NM_015345, intron 1 of 24) 42239 NM_015345 23500 Hs.357128 NM_015345 ENSG00000146122 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding chr12-4603 chr12 38446518 38446728 + 7.07 0.000 Intergenic Intergenic 129849 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr22-3221 chr22 40424967 40425177 + 7.07 0.000 intron (NM_020831, intron 7 of 14) intron (NM_020831, intron 7 of 14) 38368 NM_001282660 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr14-5191 chr14 94805851 94806061 + 7.07 0.000 Intergenic L1MEd|LINE|L1 35314 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr15-5060 chr15 85105548 85105758 + 7.07 0.000 intron (NM_001243137, intron 11 of 21) intron (NM_001243137, intron 11 of 21) 123679 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr12-8292 chr12 126570508 126570718 + 7.07 0.000 Intergenic Intergenic 119705 NR_110034 100996671 Hs.121392 NR_110034 ENSG00000256732 LOC100996671 - uncharacterized LOC100996671 ncRNA chr20-682 chr20 56859890 56860100 + 7.07 0.000 Intergenic Intergenic 230689 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr1-10918 chr1 209368207 209368417 + 7.07 0.000 Intergenic Intergenic -3743 NR_146491 101929476 Hs.568721 NR_146491 LINC01698 - long intergenic non-protein coding RNA 1698 ncRNA chr14-5328 chr14 102416291 102416501 + 7.07 0.000 intron (NM_014844, intron 5 of 19) AluSq|SINE|Alu 53455 NM_014844 9895 Hs.195667 NM_014844 ENSG00000196663 TECPR2 KIAA0329|SPG49 tectonin beta-propeller repeat containing 2 protein-coding chr13-3585 chr13 27370742 27370952 + 7.07 0.000 Intergenic Intergenic -53772 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr6-7234 chr6 41214858 41215068 + 7.07 0.000 intron (NR_027256, intron 3 of 4) LTR10A|LTR|ERV1 2984 NR_027256 340206 Hs.93698 NR_027256 ENSG00000184106 TREML3P TLT3|TREML3 triggering receptor expressed on myeloid cells like 3, pseudogene pseudo chr3-8000 chr3 184543817 184544027 + 7.07 0.000 Intergenic Intergenic 12996 NR_046593 100874079 Hs.574899 NR_046593 ENSG00000230215 LINC01840 EIF2B5-AS1 long intergenic non-protein coding RNA 1840 ncRNA chr12-7733 chr12 92668900 92669110 + 7.07 0.000 Intergenic Intergenic -33838 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000187510 C12orf74 - chromosome 12 open reading frame 74 protein-coding chr2-9739 chr2 72082801 72083011 + 7.07 0.000 Intergenic Intergenic 64956 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chrX-4428 chrX 54217417 54217627 + 7.07 0.000 intron (NM_001002838, intron 21 of 22) AluSc|SINE|Alu -34268 NM_001300788 54954 Hs.86045 NM_017848 ENSG00000184083 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding chr17-3485 chr17 46968043 46968253 + 7.07 0.000 Intergenic Intergenic -4869 NR_049812 100847067 NR_049812 ENSG00000264999 MIR5089 - microRNA 5089 ncRNA chr3-10404 chr3 130026681 130026891 + 7.07 0.000 Intergenic HERVE-int|LTR|ERV1 52066 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr21-1952 chr21 45935706 45935916 + 7.07 0.000 intron (NR_145492, intron 15 of 16) intron (NR_145492, intron 15 of 16) -37159 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr21-982 chr21 9745804 9746014 + 7.07 0.000 Intergenic L1MEf|LINE|L1 75152 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr8-4068 chr8 65761390 65761600 + 7.07 0.000 intron (NM_001242318, intron 3 of 12) intron (NM_001242318, intron 3 of 12) 27562 NM_002603 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chr5-9065 chr5 170920409 170920619 + 7.07 0.000 intron (NM_022897, intron 11 of 27) L1ME1|LINE|L1 58496 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chr17-2673 chr17 39112336 39112546 + 7.07 0.000 intron (NM_020405, intron 2 of 13) intron (NM_020405, intron 2 of 13) 39196 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr5-8729 chr5 144985310 144985520 + 7.07 0.000 Intergenic AluJb|SINE|Alu 780024 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr1-15472 chr1 154859916 154860126 + 7.07 0.000 promoter-TSS (NM_170782) promoter-TSS (NM_170782) -145 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr10-7379 chr10 2861775 2861985 + 7.07 0.000 Intergenic Intergenic 205053 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr17-3491 chr17 48264582 48264792 + 7.07 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -29660 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr21-1941 chr21 45698611 45698821 + 7.07 0.000 intron (NM_001348238, intron 2 of 16) intron (NM_001348238, intron 2 of 16) 29842 NM_001348242 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr20-2452 chr20 29085568 29085778 + 7.07 0.000 intron (NR_132316, intron 2 of 5) MER30|DNA|hAT-Charlie 5283 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr6-4312 chr6 15734146 15734356 + 7.07 0.000 Intergenic Intergenic -71193 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr12-5121 chr12 97372424 97372634 + 7.07 0.000 Intergenic L2a|LINE|L2 -90247 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr8-6583 chr8 71131822 71132032 + 7.07 0.000 Intergenic Intergenic 224779 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr19-5734 chr19 17975540 17975750 + 7.07 0.000 intron (NM_002248, intron 4 of 10) AluSz|SINE|Alu 24343 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr16-4650 chr16 74858553 74858763 + 7.07 0.000 Intergenic Charlie8|DNA|hAT-Charlie -83838 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr3-7216 chr3 193128574 193128784 + 7.07 0.000 Intergenic Intergenic -112543 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr11-5833 chr11 8571003 8571213 + 7.07 0.000 intron (NM_001289058, intron 1 of 13) L1MEc|LINE|L1 22868 NM_001289061 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr11-5387 chr11 65879369 65879579 + 7.07 0.000 promoter-TSS (NM_001335) promoter-TSS (NM_001335) -363 NM_001335 1521 Hs.416848 NM_001335 ENSG00000172543 CTSW LYPN cathepsin W protein-coding chr10-7952 chr10 54187415 54187625 + 7.07 0.000 intron (NM_001142770, intron 11 of 34) intron (NM_001142770, intron 11 of 34) -298710 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr2-13570 chr2 155718833 155719043 + 7.07 0.000 Intergenic Intergenic 535993 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr6-5825 chr6 21079628 21079838 + 7.07 0.000 intron (NM_017774, intron 12 of 15) intron (NM_017774, intron 12 of 15) 432159 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr6-6134 chr6 163862112 163862322 + 7.07 0.000 Intergenic Intergenic -190733 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr12-5653 chr12 79532864 79533074 + 7.07 0.000 Intergenic Intergenic 113712 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr1-6141 chr1 168621368 168621578 + 7.07 0.000 Intergenic Intergenic 44868 NM_002995 6375 Hs.546295 NM_002995 ENSG00000143184 XCL1 ATAC|LPTN|LTN|SCM-1|SCM-1a|SCM1|SCM1A|SCYC1 X-C motif chemokine ligand 1 protein-coding chr2-10491 chr2 222275893 222276103 + 7.07 0.000 intron (NM_181457, intron 4 of 7) intron (NM_181457, intron 4 of 7) -22149 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr17-8127 chr17 58118030 58118240 + 7.07 0.000 Intergenic MIRb|SINE|MIR 34716 NM_080677 140735 Hs.720595 NM_080677 ENSG00000264364 DYNLL2 DNCL1B|Dlc2|RSPH22 dynein light chain LC8-type 2 protein-coding chr8-4220 chr8 86269078 86269288 + 7.07 0.000 Intergenic Intergenic -38802 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr4-7391 chr4 62004002 62004212 + 7.07 0.000 intron (NM_001371343, intron 20 of 23) intron (NM_001371343, intron 20 of 23) 157658 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr12-5059 chr12 90552807 90553017 + 7.07 0.000 Intergenic Intergenic 259594 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr4-7751 chr4 93525050 93525260 + 7.07 0.000 intron (NM_001286838, intron 12 of 14) L2c|LINE|L2 -303598 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr2-11976 chr2 27152905 27153115 + 7.07 0.000 3' UTR (NM_175769, exon 3 of 3) 3' UTR (NM_175769, exon 3 of 3) 4006 NM_175769 150921 Hs.591583 NM_175769 ENSG00000163792 TCF23 OUT|TCF-23|bHLHa24 transcription factor 23 protein-coding chr1-11344 chr1 28720428 28720638 + 7.07 0.000 Intergenic Intergenic -16088 NM_001173128 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr18-1857 chr18 24812306 24812516 + 7.07 0.000 Intergenic Intergenic 86630 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chr5-5991 chr5 133098388 133098598 + 7.07 0.000 intron (NM_002154, intron 15 of 18) AluY|SINE|Alu 46480 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chrX-5416 chrX 153443673 153443883 + 7.07 0.000 TTS (NM_080701) TTS (NM_080701) 2709 NM_080701 11219 Hs.644635 NM_080699 ENSG00000183479 TREX2 - three prime repair exonuclease 2 protein-coding chr10-7959 chr10 56299053 56299263 + 7.07 0.000 Intergenic MER1B|DNA|hAT-Charlie 62101 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr13-3060 chr13 35744772 35744982 + 7.07 0.000 Intergenic Intergenic 47150 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr13-3922 chr13 57952402 57952612 + 7.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR -213320 NR_120416 101926897 Hs.640215 NR_120416 ENSG00000277448 LINC02338 - long intergenic non-protein coding RNA 2338 ncRNA chr13-3975 chr13 63909509 63909719 + 7.07 0.000 Intergenic L1MEa|LINE|L1 -65489 NR_130763 102723968 Hs.551671 NR_130763 ENSG00000219926 LOC102723968 - uncharacterized LOC102723968 ncRNA chr1-12395 chr1 9093466 9093676 + 7.07 0.000 Intergenic HERVFH19-int|LTR|ERV1 -21312 NM_001328619 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr8-6971 chr8 107163760 107163970 + 7.07 0.000 Intergenic Intergenic 172650 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr4-6640 chr4 1864564 1864774 + 7.07 0.000 Intergenic Intergenic -6724 NM_001042424 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr3-9666 chr3 62428971 62429181 + 7.07 0.000 intron (NM_003716, intron 28 of 29) MER112|DNA|hAT-Charlie -55526 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr12-8044 chr12 114484750 114484960 + 7.07 0.000 Intergenic SVA_B|Retroposon|SVA -76413 NM_000192 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box transcription factor 5 protein-coding chr7-4999 chr7 423704 423914 + 7.07 0.000 Intergenic Intergenic 44384 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr9-5931 chr9 133673627 133673837 + 7.07 0.000 intron (NM_001134707, intron 17 of 20) intron (NM_001134707, intron 17 of 20) -16324 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr11-9052 chr11 28357318 28357528 + 7.07 0.000 Intergenic Intergenic 120125 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr2-13285 chr2 128518000 128518210 + 7.07 0.000 Intergenic MIR3|SINE|MIR -199237 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr20-2600 chr20 38697904 38698114 + 7.07 0.000 Intergenic Intergenic -26477 NM_080552 140679 Hs.179080 NM_080552 ENSG00000101438 SLC32A1 VGAT|VIAAT solute carrier family 32 member 1 protein-coding chr11-6908 chr11 107496462 107496672 + 7.07 0.000 Intergenic AluJr|SINE|Alu -38721 NM_152434 143884 Hs.212140 NM_152434 ENSG00000152404 CWF19L2 - CWF19 like cell cycle control factor 2 protein-coding chr6-8337 chr6 147306661 147306871 + 7.07 0.000 intron (NM_139244, intron 9 of 25) L2b|LINE|L2 -102152 NR_034115 729178 Hs.557608 NR_034115 STXBP5-AS1 - STXBP5 antisense RNA 1 ncRNA chr3-11122 chr3 186663565 186663775 + 7.07 0.000 Intergenic LTR7|LTR|ERV1 -2282 NM_000412 3273 Hs.1498 NM_000412 ENSG00000113905 HRG HPRG|HRGP|THPH11 histidine rich glycoprotein protein-coding chr17-4826 chr17 57559609 57559819 + 7.07 0.000 intron (NM_001322250, intron 7 of 13) intron (NM_001322250, intron 7 of 13) -36117 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr7-6297 chr7 139520275 139520485 + 7.07 0.000 Intergenic SVA_E|Retroposon|SVA -3305 NM_001080511 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr17-6781 chr17 3272045 3272255 + 7.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 6824 NM_002551 4995 Hs.647414 NM_002551 ENSG00000221882 OR3A2 OLFRA04|OR17-14|OR17-228|OR228 olfactory receptor family 3 subfamily A member 2 protein-coding chrX-4447 chrX 55630843 55631053 + 7.07 0.000 Intergenic L1PA6|LINE|L1 7548 NM_198451 139628 Hs.364260 NM_198451 ENSG00000189299 FOXR2 FOXN6 forkhead box R2 protein-coding chr9-6588 chr9 125407491 125407701 + 7.07 0.000 Intergenic Intergenic 145770 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chrX-2097 chrX 23907261 23907471 + 7.07 0.000 promoter-TSS (NM_152761) promoter-TSS (NM_152761) 572 NR_026545 79135 Hs.495851 NM_024122 ENSG00000184831 APOO FAM121B|MIC26|MICOS26|Mic23|My025 apolipoprotein O protein-coding chr3-6292 chr3 73340500 73340710 + 7.07 0.000 Intergenic AluSg|SINE|Alu 93390 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chrX-1442 chrX 65677895 65678105 + 7.07 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 10346 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr2-13858 chr2 177850721 177850931 + 7.07 0.000 intron (NM_001077197, intron 6 of 20) L1PA5|LINE|L1 37930 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr22-2860 chr22 44915223 44915433 + 7.07 0.000 intron (NM_138415, intron 4 of 12) L1ME4c|LINE|L1 88291 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr5-5354 chr5 131970323 131970533 + 7.07 0.000 intron (NM_015256, intron 14 of 20) AluY|SINE|Alu -24765 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chrX-1509 chrX 12950183 12950393 + 7.07 0.000 Intergenic Intergenic -6988 NR_030727 349408 Hs.685035 NR_030727 ENSG00000233338 TLR8-AS1 GS1-324M7.6 TLR8 antisense RNA 1 ncRNA chr6-7597 chr6 75936914 75937124 + 7.07 0.000 intron (NM_001563, intron 14 of 16) intron (NM_001563, intron 14 of 16) 135643 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr1-13698 chr1 14140921 14141131 + 7.07 0.000 Intergenic Intergenic 278947 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr20-3703 chr20 15564096 15564306 + 7.07 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 359113 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr1-14225 chr1 35902145 35902355 + 7.07 0.000 exon (NM_012199, exon 11 of 19) exon (NM_012199, exon 11 of 19) 19041 NM_012199 26523 Hs.22867 NM_012199 ENSG00000092847 AGO1 EIF2C|EIF2C1|GERP95|Q99|hAgo1 argonaute RISC component 1 protein-coding chr3-4696 chr3 50479280 50479490 + 7.07 0.000 intron (NM_001291101, intron 1 of 37) intron (NM_001291101, intron 1 of 37) 24249 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr2-9364 chr2 228282276 228282486 + 7.07 0.000 Intergenic Intergenic -100694 NM_001142644 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr18-2290 chr18 76991242 76991452 + 7.07 0.000 intron (NM_001025090, intron 1 of 5) intron (NM_001025090, intron 1 of 5) 25708 NM_001025081 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr17-6062 chr17 79610043 79610253 + 7.07 0.000 intron (NM_001350451, intron 1 of 14) CpG 903 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr22-3096 chr22 46529823 46530033 + 7.07 0.000 intron (NM_014246, intron 1 of 34) L1MA2|LINE|L1 7692 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr3-6511 chr3 113600970 113601180 + 7.07 0.000 intron (NR_136280, intron 11 of 25) intron (NR_136280, intron 11 of 25) 6199 NR_039648 100616476 NR_039648 ENSG00000265253 MIR4446 mir-4446 microRNA 4446 ncRNA chr14-4812 chr14 67805579 67805789 + 7.07 0.000 intron (NM_015346, intron 6 of 41) intron (NM_015346, intron 6 of 41) 10906 NM_015346 23503 Hs.98041 NM_015346 ENSG00000072121 ZFYVE26 FYVE-CENT|SPG15 zinc finger FYVE-type containing 26 protein-coding chr10-4526 chr10 93078919 93079129 + 7.07 0.000 Intergenic AluSx|SINE|Alu 5131 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr6-5937 chr6 71530858 71531068 + 7.07 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 109936 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr12-5022 chr12 84463813 84464023 + 7.07 0.000 Intergenic Intergenic 448881 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr7-2713 chr7 30969420 30969630 + 7.07 0.000 intron (NM_000823, intron 3 of 12) intron (NM_000823, intron 3 of 12) 5572 NM_000823 2692 Hs.767 NM_000823 ENSG00000106128 GHRHR GHRFR|GRFR|IGHD1B|IGHD4 growth hormone releasing hormone receptor protein-coding chr6-1704 chr6 24646063 24646273 + 7.07 0.000 promoter-TSS (NM_001350404) promoter-TSS (NM_001350404) -13 NM_001168374 9856 Hs.26441 NM_014809 ENSG00000137261 KIAA0319 AAVR|DYLX2|DYX2|NMIG KIAA0319 protein-coding chr12-6002 chr12 100564127 100564337 + 7.07 0.000 non-coding (NR_135146, exon 11 of 11) non-coding (NR_135146, exon 11 of 11) -9452 NM_001363672 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr3-7829 chr3 106811613 106811823 + 7.07 0.000 Intergenic Intergenic 428920 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr6-8064 chr6 122668529 122668739 + 7.07 0.000 intron (NM_001270395, intron 1 of 4) intron (NM_001270395, intron 1 of 4) 15905 NM_001270395 5570 Hs.741340 NM_032471 ENSG00000135549 PKIB PRKACN2 cAMP-dependent protein kinase inhibitor beta protein-coding chr4-7118 chr4 35890386 35890596 + 7.07 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 353448 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr19-7036 chr19 50559522 50559732 + 7.07 0.000 intron (NM_001080457, intron 1 of 2) intron (NM_001080457, intron 1 of 2) -8585 NM_001348568 94030 Hs.120873 NM_001080457 ENSG00000131409 LRRC4B HSM|LRIG4|NGL-3 leucine rich repeat containing 4B protein-coding chr9-7737 chr9 74655711 74655921 + 7.07 0.000 intron (NM_006914, intron 4 of 9) intron (NM_006914, intron 4 of 9) 40282 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr9-5917 chr9 133064564 133064774 + 7.07 0.000 exon (NM_001807, exon 3 of 11) exon (NM_001807, exon 3 of 11) 2687 NM_001807 1056 Hs.533258 NM_001807 ENSG00000170835 CEL BAL|BSDL|BSSL|CELL|CEase|FAP|FAPP|LIPA|MODY8 carboxyl ester lipase protein-coding chr17-6066 chr17 79667350 79667560 + 7.07 0.000 Intergenic Intergenic 39794 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr15-3110 chr15 65009970 65010180 + 7.07 0.000 intron (NM_139242, intron 6 of 8) L2a|LINE|L2 19564 NM_139242 123263 Hs.531615 NM_139242 ENSG00000103707 MTFMT COXPD15|FMT1|MC1DN27 mitochondrial methionyl-tRNA formyltransferase protein-coding chr3-8807 chr3 6787523 6787733 + 7.07 0.000 intron (NR_110125, intron 2 of 3) MLT1K|LTR|ERVL-MaLR 17821 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr13-3344 chr13 72084051 72084261 + 7.07 0.000 Intergenic L1PA5|LINE|L1 -216952 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr8-1444 chr8 134057098 134057308 + 7.07 0.000 Intergenic AluSq2|SINE|Alu 170707 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr10-2189 chr10 19620886 19621096 + 7.07 0.000 intron (NM_001142308, intron 36 of 39) L1MC4|LINE|L1 107559 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr6-3327 chr6 781088 781298 + 7.07 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR -87305 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr3-9301 chr3 43102207 43102417 + 7.07 0.000 intron (NM_032806, intron 1 of 1) intron (NM_032806, intron 1 of 1) 3767 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chrX-3317 chrX 119391387 119391597 + 7.07 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -7844 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr7-5809 chr7 82029487 82029697 + 7.07 0.000 non-coding (NR_110076, exon 5 of 5) non-coding (NR_110076, exon 5 of 5) 20415 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr1-14308 chr1 39259014 39259224 + 7.07 0.000 intron (NM_012090, intron 5 of 92) intron (NM_012090, intron 5 of 92) -149954 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr13-4334 chr13 102107657 102107867 + 7.07 0.000 intron (NM_175929, intron 1 of 4) L2c|LINE|L2 -61758 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr2-7325 chr2 240913796 240914006 + 7.07 0.000 intron (NM_001351305, intron 1 of 31) intron (NM_001351305, intron 1 of 31) 7565 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr4-4321 chr4 32109536 32109746 + 7.07 0.000 intron (NR_125936, intron 1 of 2) L1PA10|LINE|L1 -87219 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA chr11-7877 chr11 122880069 122880279 + 7.07 0.000 Intergenic LTR50|LTR|ERVL -2354 NM_001363088 79864 Hs.164705 NM_024806 ENSG00000109944 JHY C11orf63 junctional cadherin complex regulator protein-coding chr9-5439 chr9 97395345 97395555 + 7.07 0.000 intron (NR_026847, intron 2 of 5) intron (NR_026847, intron 2 of 5) 1241 NR_026847 286359 Hs.132262 NM_182600 LOC286359 - uncharacterized LOC286359 ncRNA chr5-5127 chr5 103348242 103348452 + 7.07 0.000 Intergenic Intergenic 88923 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr11-7772 chr11 85051597 85051807 + 7.07 0.000 intron (NM_001351274, intron 5 of 26) MIR|SINE|MIR -128281 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr18-2618 chr18 31764753 31764963 + 7.07 0.000 Intergenic Intergenic -3978 NM_001034172 147407 Hs.567708 NM_001034172 ENSG00000141437 SLC25A52 MCART2 solute carrier family 25 member 52 protein-coding chr7-7661 chr7 150862017 150862227 + 7.07 0.000 TTS (NM_001272072) TTS (NM_001272072) 9605 NM_001272072 26 Hs.647097 NM_001091 ENSG00000002726 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase copper containing 1 protein-coding chr8-3786 chr8 25813383 25813593 + 7.07 0.000 Intergenic L1MEc|LINE|L1 231925 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr4-5624 chr4 3683033 3683243 + 7.07 0.000 Intergenic Intergenic -5283 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr11-10617 chr11 125061288 125061498 + 7.07 0.000 Intergenic Intergenic -1912 NM_001145290 219855 Hs.352661 NM_198277 ENSG00000134955 SLC37A2 pp11662 solute carrier family 37 member 2 protein-coding chr19-6655 chr19 33514213 33514423 + 7.07 0.000 intron (NM_001166056, intron 1 of 12) intron (NM_001166056, intron 1 of 12) 7473 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr7-7979 chr7 14648767 14648977 + 7.07 0.000 intron (NM_001350722, intron 13 of 25) L1PA2|LINE|L1 192578 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chrX-3617 chrX 85940387 85940597 + 7.07 0.000 intron (NM_001320959, intron 8 of 14) MER20|DNA|hAT-Charlie -36785 NR_029848 494323 NR_029848 ENSG00000199051 MIR361 MIRN361|hsa-mir-361|mir-361 microRNA 361 ncRNA chr6-3707 chr6 168390698 168390908 + 7.07 0.000 Intergenic Intergenic -50381 NM_001166412 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr14-3468 chr14 101359891 101360101 + 7.07 0.000 Intergenic Intergenic 47926 NR_126006 338002 Hs.124848 NR_126006 ENSG00000259023 LINC00524 C14orf71 long intergenic non-protein coding RNA 524 ncRNA chr12-4952 chr12 71837355 71837565 + 7.07 0.000 Intergenic AluSz6|SINE|Alu -2299 NM_001146213 64786 Hs.284630 NM_022771 ENSG00000121749 TBC1D15 RAB7-GAP TBC1 domain family member 15 protein-coding chrX-2261 chrX 48045812 48046022 + 7.07 0.000 Intergenic Intergenic -10393 NR_046742 100874120 Hs.618606 NR_046742 ZNF630-AS1 - ZNF630 antisense RNA 1 ncRNA chr17-8354 chr17 73946032 73946242 + 7.07 0.000 Intergenic MER1B|DNA|hAT-Charlie -117600 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr4-5694 chr4 27278798 27279008 + 7.07 0.000 intron (NR_125921, intron 5 of 5) intron (NR_125921, intron 5 of 5) 61424 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chrX-3096 chrX 139634621 139634831 + 7.07 0.000 intron (NM_001099855, intron 4 of 27) intron (NM_001099855, intron 4 of 27) 8115 NM_001171879 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr3-7380 chr3 68969963 68970173 + 7.07 0.000 Intergenic Intergenic -37458 NM_001005527 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr5-6682 chr5 62001456 62001666 + 7.07 0.000 Intergenic Intergenic -265863 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr16-6734 chr16 74508438 74508648 + 7.07 0.000 intron (NR_027264, intron 3 of 26) intron (NR_027264, intron 3 of 26) -87073 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr14-3891 chr14 95018880 95019090 + 7.07 0.000 Intergenic L1ME4c|LINE|L1 114518 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr9-7800 chr9 80313205 80313415 + 7.07 0.000 Intergenic L1PREC2|LINE|L1 338287 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr10-6618 chr10 96189288 96189498 + 7.07 0.000 intron (NR_138482, intron 3 of 4) intron (NR_138482, intron 3 of 4) 58771 NM_001330734 9849 Hs.600823 NM_014803 ENSG00000177853 ZNF518A ZNF518 zinc finger protein 518A protein-coding chr1-16455 chr1 227845808 227846018 + 7.07 0.000 intron (NM_183062, intron 4 of 4) intron (NM_183062, intron 4 of 4) 30196 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr11-10260 chr11 102318587 102318797 + 7.07 0.000 intron (NM_182962, intron 1 of 9) intron (NM_182962, intron 1 of 9) 1208 NM_182962 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr10-8117 chr10 69661897 69662107 + 7.07 0.000 Intergenic Intergenic 31755 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr7-3253 chr7 2893628 2893838 + 7.07 0.000 Intergenic Intergenic -49425 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr3-5708 chr3 15139712 15139922 + 7.07 0.000 Intergenic Intergenic -40660 NR_126155 64145 Hs.475565 NM_022340 ENSG00000131381 RBSN Rabenosyn-5|ZFYVE20 rabenosyn, RAB effector protein-coding chr1-11123 chr1 232257833 232258043 + 7.07 0.000 Intergenic Intergenic 257670 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr2-3605 chr2 85459807 85460017 + 7.07 0.000 Intergenic HAL1|LINE|L1 40981 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr5-7933 chr5 79259646 79259856 + 7.07 0.000 intron (NM_152405, intron 1 of 10) MER52D|LTR|ERV1 23620 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr2-11812 chr2 17266742 17266952 + 7.07 0.000 Intergenic MER102a|DNA|hAT-Charlie 251593 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr1-8930 chr1 7708199 7708409 + 7.07 0.000 intron (NM_001349624, intron 1 of 11) AluJb|SINE|Alu 3568 NM_001349616 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr1-13314 chr1 239707897 239708107 + 7.07 0.000 intron (NR_103776, intron 2 of 2) intron (NR_103776, intron 2 of 2) 11117 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr6-7919 chr6 109447185 109447395 + 7.07 0.000 intron (NM_001286613, intron 16 of 24) intron (NM_001286613, intron 16 of 24) -6119 NM_173672 285755 Hs.32234 NM_173672 ENSG00000185250 PPIL6 PPIase|RSPH12|bA425D10.6|dJ919F19.1 peptidylprolyl isomerase like 6 protein-coding chr2-13755 chr2 170264114 170264324 + 7.07 0.000 intron (NM_001083615, intron 7 of 33) LTR5_Hs|LTR|ERVK 86072 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr1-16170 chr1 206463226 206463436 + 7.07 0.000 3' UTR (NM_001170637, exon 22 of 22) 3' UTR (NM_001170637, exon 22 of 22) -7145 NM_001193322 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of nuclear factor kappa B kinase subunit epsilon protein-coding chr5-7431 chr5 29586846 29587056 + 7.07 0.000 Intergenic L1M2|LINE|L1 -190975 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA chr9-4973 chr9 18320371 18320581 + 7.07 0.000 Intergenic L1ME2|LINE|L1 -153677 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr2-11467 chr2 231726475 231726685 + 7.07 0.000 Intergenic LTR81A|LTR|Gypsy 13266 NR_036052 100302285 NR_036052 ENSG00000284378 MIR1244-1 MIR1244|MIRN1244|hsa-mir-1244|hsa-mir-1244-1 microRNA 1244-1 ncRNA chr4-5996 chr4 186159669 186159879 + 7.07 0.000 intron (NM_015398, intron 8 of 13) intron (NM_015398, intron 8 of 13) 14887 NM_015398 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr17-6174 chr17 82620983 82621193 + 7.07 0.000 intron (NM_019613, intron 6 of 9) AluSz|SINE|Alu 27356 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr7-4390 chr7 88184891 88185101 + 7.07 0.000 intron (NM_001324421, intron 28 of 28) intron (NM_001324421, intron 28 of 28) -31664 NR_120517 102723885 Hs.489040 NR_120517 LOC102723885 - uncharacterized LOC102723885 ncRNA chr16-5099 chr16 86202103 86202313 + 7.07 0.000 Intergenic Intergenic 6027 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr3-9839 chr3 78186845 78187055 + 7.07 0.000 Intergenic Intergenic -137987 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr10-6054 chr10 127989965 127990175 + 7.07 0.000 intron (NM_001316677, intron 1 of 20) intron (NM_001316677, intron 1 of 20) 2790 NM_001316677 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr20-2093 chr20 22595056 22595266 + 7.07 0.000 intron (NR_109883, intron 1 of 2) intron (NR_109883, intron 1 of 2) -9671 NM_153675 3170 Hs.155651 NM_021784 ENSG00000125798 FOXA2 HNF3B|TCF3B forkhead box A2 protein-coding chr17-2802 chr17 7646943 7647153 + 7.07 0.000 intron (NM_001303263, intron 1 of 5) AluJr|SINE|Alu 421 NM_001303263 482 Hs.643540 NM_001678 ENSG00000129244 ATP1B2 AMOG ATPase Na+/K+ transporting subunit beta 2 protein-coding chr2-13901 chr2 181394877 181395087 + 7.07 0.000 intron (NR_130784, intron 4 of 4) LTR33|LTR|ERVL -61910 NM_001316312 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr2-12711 chr2 79660635 79660845 + 7.07 0.000 intron (NM_001282598, intron 2 of 17) intron (NM_001282598, intron 2 of 17) -11381 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA chr10-8043 chr10 63839270 63839480 + 7.07 0.000 Intergenic LTR33B|LTR|ERVL -317485 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr4-6552 chr4 181120488 181120698 + 7.07 0.000 intron (NR_033918, intron 2 of 2) AluSq2|SINE|Alu 38556 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr11-8157 chr11 60840827 60841037 + 7.07 0.000 Intergenic Intergenic -1181 NM_024098 79080 Hs.4253 NM_024098 ENSG00000110104 CCDC86 - coiled-coil domain containing 86 protein-coding chr9-8181 chr9 106453286 106453496 + 7.07 0.000 Intergenic AluSc|SINE|Alu -147537 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr1-5890 chr1 5832733 5832943 + 7.07 0.000 Intergenic MER21C|LTR|ERVL 29903 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr14-5230 chr14 98385481 98385691 + 7.07 0.000 Intergenic MER52C|LTR|ERV1 -326027 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr5-5528 chr5 144455663 144455873 + 7.07 0.000 intron (NM_001370487, intron 2 of 2) intron (NM_001370487, intron 2 of 2) 250377 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr18-2770 chr18 966028 966238 + 7.07 0.000 Intergenic MIRb|SINE|MIR -38140 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA chr12-2304 chr12 120940828 120941038 + 7.07 0.000 Intergenic AluSz6|SINE|Alu 31359 NR_024345 283460 Hs.612351 NR_024345 ENSG00000241388 HNF1A-AS1 C12orf27|HAS1|NCRNA00262 HNF1A antisense RNA 1 ncRNA chr6-7590 chr6 74872148 74872358 + 7.07 0.000 Intergenic THE1A|LTR|ERVL-MaLR 256529 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr12-6597 chr12 125230014 125230224 + 7.07 0.000 intron (NM_001366854, intron 1 of 8) MLT1K|LTR|ERVL-MaLR 43733 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr20-1862 chr20 33621143 33621353 + 7.07 0.000 intron (NM_001039709, intron 4 of 10) MER58D|DNA|hAT-Charlie -41079 NM_080825 128864 Hs.324104 NM_080825 ENSG00000149609 C20orf144 dJ63M2.6 chromosome 20 open reading frame 144 protein-coding chr1-14728 chr1 66243721 66243931 + 7.07 0.000 intron (NM_001037340, intron 1 of 14) intron (NM_001037340, intron 1 of 14) -88282 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr11-10090 chr11 85884670 85884880 + 7.07 0.000 intron (NM_001286159, intron 4 of 10) intron (NM_001286159, intron 4 of 10) 29674 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr5-7193 chr5 6586685 6586895 + 7.07 0.000 non-coding (NR_024423, exon 5 of 5) non-coding (NR_024423, exon 5 of 5) 3514 NR_024424 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 SRHC long intergenic non-protein coding RNA 1018 ncRNA chr2-13217 chr2 122885573 122885783 + 7.07 0.000 Intergenic Intergenic 187803 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr2-12633 chr2 73208069 73208279 + 7.07 0.000 intron (NM_001134462, intron 1 of 2) intron (NM_001134462, intron 1 of 2) 5600 NM_001134462 344022 Hs.694384 NM_001134462 ENSG00000214513 NOTO - notochord homeobox protein-coding chr12-4388 chr12 5705852 5706062 + 7.07 0.000 intron (NM_001278596, intron 15 of 25) intron (NM_001278596, intron 15 of 25) 211825 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr11-9480 chr11 62143456 62143666 + 7.07 0.000 intron (NM_001040694, intron 11 of 18) L1MD2|LINE|L1 19550 NM_001040694 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr19-5957 chr19 308163 308373 + 7.07 0.000 intron (NM_001346105, intron 11 of 12) intron (NM_001346105, intron 11 of 12) -16865 NM_177526 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr7-8783 chr7 81052040 81052250 + 7.07 0.000 Intergenic Intergenic -129756 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr15-5163 chr15 92247127 92247337 + 7.07 0.000 Intergenic Intergenic -146649 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr14-3401 chr14 95602002 95602212 + 7.07 0.000 Intergenic L2b|LINE|L2 28545 NR_146449 100506999 Hs.112858 NR_146449 ENSG00000258390 LINC02318 - long intergenic non-protein coding RNA 2318 ncRNA chr20-3545 chr20 1834826 1835036 + 7.07 0.000 Intergenic LTR33|LTR|ERVL -55185 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr7-4651 chr7 31532129 31532339 + 7.07 0.000 intron (NM_001257968, intron 1 of 14) intron (NM_001257968, intron 1 of 14) 2772 NM_001257968 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr13-4135 chr13 82769636 82769846 + 7.07 0.000 Intergenic L1MA1|LINE|L1 1112652 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr12-3636 chr12 94991630 94991840 + 7.07 0.000 intron (NM_001258338, intron 2 of 2) AluSx1|SINE|Alu 11962 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13|MC1DN23 NADH:ubiquinone oxidoreductase subunit A12 protein-coding chr5-7395 chr5 23913290 23913500 + 7.07 0.000 Intergenic Intergenic -37953 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA chr16-6295 chr16 35588739 35588949 + 7.07 0.000 Intergenic Intergenic -81674 NR_034018 100130700 Hs.97712 NR_034018 TP53TG3HP - TP53 target 3 family member H, pseudogene pseudo chr9-7594 chr9 36751422 36751632 + 7.07 0.000 Intergenic LTR89|LTR|ERVL? 72072 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr20-4382 chr20 57572190 57572400 + 7.07 0.000 Intergenic Intergenic 11185 NM_002591 5105 Hs.1872 NM_002591 ENSG00000124253 PCK1 PCKDC|PEPCK-C|PEPCK1|PEPCKC phosphoenolpyruvate carboxykinase 1 protein-coding chr2-8735 chr2 159741069 159741279 + 7.07 0.000 intron (NM_001282807, intron 1 of 8) AluJr|SINE|Alu 7210 NM_001282807 64844 Hs.529272 NM_022826 ENSG00000136536 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane associated ring-CH-type finger 7 protein-coding chr6-7923 chr6 109497942 109498152 + 7.07 0.000 intron (NM_001145128, intron 36 of 40) intron (NM_001145128, intron 36 of 40) -14810 NM_014797 9841 Hs.409876 NM_014797 ENSG00000112365 ZBTB24 BIF1|ICF2|PATZ2|ZNF450 zinc finger and BTB domain containing 24 protein-coding chr13-3435 chr13 102835212 102835422 + 7.07 0.000 intron (NM_001159596, intron 7 of 8) AluJb|SINE|Alu -10524 NM_000123 2073 Hs.258429 NM_000123 ENSG00000134899 ERCC5 COFS3|ERCC5-201|ERCM2|UVDR|XPG|XPGC ERCC excision repair 5, endonuclease protein-coding chr3-5582 chr3 6761477 6761687 + 7.07 0.000 intron (NR_110125, intron 2 of 3) L1PA10|LINE|L1 43867 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr1-8800 chr1 1832952 1833162 + 7.07 0.000 intron (NM_001282539, intron 1 of 10) intron (NM_001282539, intron 1 of 10) -53026 NM_001353641 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr1-7177 chr1 209114442 209114652 + 7.07 0.000 Intergenic Intergenic 142093 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr2-6404 chr2 129836213 129836423 + 7.07 0.000 Intergenic L1MA2|LINE|L1 41173 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr2-4003 chr2 95917086 95917296 + 7.07 0.000 intron (NM_001310154, intron 39 of 88) intron (NM_001310154, intron 39 of 88) 74633 NM_001310154 400986 Hs.646318 NM_001010914 ENSG00000174501 ANKRD36C - ankyrin repeat domain 36C protein-coding chr7-8049 chr7 22046592 22046802 + 7.07 0.000 Intergenic MER1B|DNA|hAT-Charlie -100798 NM_001127370 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr2-10195 chr2 98188337 98188547 + 7.07 0.000 intron (NM_001345864, intron 4 of 21) L1MA5|LINE|L1 38909 NM_001345864 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr10-5262 chr10 67894246 67894456 + 7.07 0.000 intron (NM_001142498, intron 3 of 7) intron (NM_001142498, intron 3 of 7) 2949 NM_001314049 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr3-9414 chr3 48525301 48525511 + 7.07 0.000 intron (NM_001317137, intron 9 of 12) intron (NM_001317137, intron 9 of 12) -20580 NM_001272066 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr11-5611 chr11 117558246 117558456 + 7.07 0.000 intron (NM_020693, intron 3 of 32) LTR39|LTR|ERV1 230497 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr4-2335 chr4 165627961 165628171 + 7.07 0.000 Intergenic Intergenic -56573 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr5-4933 chr5 74727042 74727252 + 7.07 0.000 intron (NR_104006, intron 16 of 19) AluJr|SINE|Alu 39970 NR_104006 84340 Hs.277154 NM_032380 ENSG00000164347 GFM2 EF-G2mt|EFG2|MRRF2|MST027|MSTP027|RRF|RRF2|RRF2mt|hEFG2|mEF-G 2 G elongation factor mitochondrial 2 protein-coding chrX-1694 chrX 13164646 13164856 + 7.07 0.000 Intergenic Intergenic -120131 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chr20-4234 chr20 48368704 48368914 + 7.07 0.000 non-coding (NR_026958, exon 5 of 5) non-coding (NR_026958, exon 5 of 5) 8898 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr8-5835 chr8 5652604 5652814 + 7.07 0.000 Intergenic MER5A1|DNA|hAT-Charlie -657795 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr9-4923 chr9 12512977 12513187 + 7.07 0.000 Intergenic Intergenic -180303 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr1-12911 chr1 114810031 114810241 + 7.07 0.000 Intergenic L1MEc|LINE|L1 -29451 NR_049742 80143 Hs.709277 NM_025073 ENSG00000052723 SIKE1 SIKE suppressor of IKBKE 1 protein-coding chr3-3709 chr3 173797048 173797258 + 7.07 0.000 intron (NM_001365928, intron 3 of 6) intron (NM_001365928, intron 3 of 6) 123643 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr1-13212 chr1 209693120 209693330 + 7.07 0.000 intron (NM_181755, intron 1 of 6) intron (NM_181755, intron 1 of 6) 7045 NM_001206741 3290 Hs.195040 NM_005525 ENSG00000117594 HSD11B1 11-DH|11-beta-HSD1|CORTRD2|HDL|HSD11|HSD11B|HSD11L|SDR26C1 hydroxysteroid 11-beta dehydrogenase 1 protein-coding chr7-3543 chr7 11662453 11662663 + 7.07 0.000 intron (NM_015204, intron 1 of 26) L1MEg|LINE|L1 169640 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr11-9531 chr11 64219717 64219927 + 7.07 0.000 intron (NM_031471, intron 9 of 14) intron (NM_031471, intron 9 of 14) 6047 NM_001160393 83707 Hs.326586 NM_031472 ENSG00000149743 TRPT1 - tRNA phosphotransferase 1 protein-coding chr16-3731 chr16 8504232 8504442 + 7.07 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 85501 NM_001290095 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr2-7787 chr2 42513416 42513626 + 7.07 0.000 intron (NM_001282755, intron 2 of 17) intron (NM_001282755, intron 2 of 17) 18952 NM_001282755 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr18-3269 chr18 51114912 51115122 + 7.07 0.000 Intergenic HERV9NC-int|LTR|ERV1 82664 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr18-3002 chr18 24682617 24682827 + 7.07 0.000 Intergenic Intergenic -43059 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chr8-6182 chr8 33913592 33913802 + 7.07 0.000 Intergenic THE1D|LTR|ERVL-MaLR -313591 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chrX-5215 chrX 135193100 135193310 + 7.07 0.000 Intergenic MIR|SINE|MIR -21378 NM_017863 54967 Hs.272804 NM_017863 ENSG00000169551 CT55 BJHCC20A|CXorf48 cancer/testis antigen 55 protein-coding chr4-6330 chr4 91012577 91012787 + 7.07 0.000 intron (NM_001145065, intron 9 of 10) L1M2a|LINE|L1 777651 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr1-15862 chr1 181762620 181762830 + 7.07 0.000 intron (NM_001205293, intron 33 of 47) intron (NM_001205293, intron 33 of 47) 279208 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr11-3092 chr11 27127958 27128168 + 7.07 0.000 TTS (NM_003986) TTS (NM_003986) 87248 NM_003986 8424 Hs.591996 NM_003986 ENSG00000129151 BBOX1 BBH|BBOX|G-BBH|gamma-BBH gamma-butyrobetaine hydroxylase 1 protein-coding chr13-3541 chr13 23949951 23950161 + 7.07 0.000 promoter-TSS (NR_073430) promoter-TSS (NR_073430) -741 NR_073430 400110 Hs.744780 NM_207439 ANKRD20A19P - ankyrin repeat domain 20 family member A19, pseudogene pseudo chr5-7645 chr5 52465236 52465446 + 7.07 0.000 Intergenic Intergenic -322575 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr21-1455 chr21 32135155 32135365 + 7.07 0.000 Intergenic Intergenic -48965 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr6-7758 chr6 93699704 93699914 + 7.07 0.000 Intergenic L2b|LINE|L2 -4208 NR_152794 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr2-12466 chr2 60421213 60421423 + 7.07 0.000 Intergenic HERVH-int|LTR|ERV1 -29943 NR_132992 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr18-2906 chr18 11823118 11823328 + 7.07 0.000 intron (NM_001369387, intron 4 of 11) intron (NM_001369387, intron 4 of 11) -28190 NM_020412 57132 Hs.656244 NM_020412 ENSG00000255112 CHMP1B C10orf2|C18-ORF2|C18orf2|CHMP1.5|Vps46-2|Vps46B|hVps46-2 charged multivesicular body protein 1B protein-coding chr19-5511 chr19 46906439 46906649 + 7.07 0.000 intron (NM_004491, intron 1 of 6) L1ME3B|LINE|L1 45547 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr3-9872 chr3 81269771 81269981 + 7.07 0.000 Intergenic Intergenic 276008 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr2-11884 chr2 23582799 23583009 + 7.07 0.000 intron (NM_052920, intron 3 of 13) MLT1C|LTR|ERVL-MaLR 197725 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2-8334 chr2 108409761 108409971 + 7.07 0.000 Intergenic Intergenic 31912 NR_135776 27233 Hs.312644 NM_006588 ENSG00000198075 SULT1C4 SULT1C|SULT1C2 sulfotransferase family 1C member 4 protein-coding chr1-14996 chr1 91374461 91374671 + 7.07 0.000 intron (NM_001017975, intron 13 of 38) L2c|LINE|L2 30271 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr12-8198 chr12 122996420 122996630 + 7.07 0.000 exon (NM_001300801, exon 12 of 25) exon (NM_001300801, exon 12 of 25) 14203 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chrX-4443 chrX 55189919 55190129 + 7.07 0.000 Intergenic MER21C|LTR|ERVL -6417 NR_132964 106635544 NR_132964 SNORA109 - small nucleolar RNA, H/ACA box 109 snoRNA chr17-6506 chr17 29309600 29309810 + 7.07 0.000 Intergenic Intergenic -15557 NM_020772 57532 Hs.462598 NM_020772 ENSG00000108256 NUFIP2 182-FIP|82-FIP|FIP-82|PIG1 nuclear FMR1 interacting protein 2 protein-coding chr13-2728 chr13 95019515 95019725 + 7.07 0.000 TTS (NM_001301829) TTS (NM_001301829) 59579 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr18-3286 chr18 52941481 52941691 + 7.07 0.000 intron (NM_005215, intron 5 of 28) (TATATA)n|Simple_repeat|Simple_repeat -295515 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr7-6347 chr7 149291719 149291929 + 7.07 0.000 intron (NR_036573, intron 5 of 10) MER5A|DNA|hAT-Charlie 6543 NR_036573 155060 Hs.490512 NR_015357 ENSG00000244560 LOC155060 - AI894139 pseudogene pseudo chr14-5313 chr14 101686921 101687131 + 7.07 0.000 Intergenic Intergenic -43411 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr2-11229 chr2 164369447 164369657 + 7.07 0.000 Intergenic Intergenic 198943 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr20-3185 chr20 46436731 46436941 + 7.07 0.000 intron (NR_146919, intron 3 of 3) L1ME1|LINE|L1 20807 NR_045983 100130934 Hs.712133 NM_173643 ZNF663P ZNF663 zinc finger protein 663, pseudogene pseudo chr2-5929 chr2 25822974 25823184 + 7.07 0.000 intron (NM_018263, intron 2 of 11) intron (NM_018263, intron 2 of 11) 7822 NM_001369346 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr20-4203 chr20 46491019 46491229 + 7.07 0.000 Intergenic Intergenic 22448 NM_001270497 55713 Hs.147041 NM_018102 ENSG00000198185 ZNF334 - zinc finger protein 334 protein-coding chr4-5155 chr4 154903680 154903890 + 7.07 0.000 Intergenic AluJo|SINE|Alu 122280 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr6-6226 chr6 19056675 19056885 + 7.07 0.000 Intergenic L1PA15|LINE|L1 123700 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr5-6209 chr5 71645636 71645846 + 7.07 0.000 intron (NM_022132, intron 12 of 16) intron (NM_022132, intron 12 of 16) 58401 NM_001363147 64087 Hs.604789 NM_022132 ENSG00000131844 MCCC2 MCCB methylcrotonoyl-CoA carboxylase 2 protein-coding chr5-7602 chr5 43231290 43231500 + 7.07 0.000 intron (NR_072980, intron 1 of 3) intron (NR_072980, intron 1 of 3) 38543 NR_072980 167359 Hs.25845 NM_153361 ENSG00000177453 NIM1K NIM1 NIM1 serine/threonine protein kinase protein-coding chr10-3817 chr10 132838000 132838210 + 7.07 0.000 intron (NM_001200049, intron 44 of 57) intron (NM_001200049, intron 44 of 57) -51958 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr11-8763 chr11 9219747 9219957 + 7.07 0.000 intron (NR_145966, intron 1 of 21) intron (NR_145966, intron 1 of 21) 45474 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr12-7229 chr12 50886762 50886972 + 7.07 0.000 intron (NM_182559, intron 4 of 4) intron (NM_182559, intron 4 of 4) -38148 NM_014033 25840 Hs.711113 NM_014033 ENSG00000185432 METTL7A AAM-B|AAMB methyltransferase like 7A protein-coding chr10-6411 chr10 11452396 11452606 + 7.07 0.000 Intergenic Intergenic 79779 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr6-5463 chr6 159399516 159399726 + 7.07 0.000 Intergenic Intergenic 16090 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA chr6-1181 chr6 133135771 133135981 + 7.07 0.000 Intergenic AluSx1|SINE|Alu 47796 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr10-4916 chr10 22354236 22354446 + 7.07 0.000 intron (NM_001253854, intron 3 of 13) intron (NM_001253854, intron 3 of 13) 8845 NM_172242 9576 Hs.655170 NM_012443 ENSG00000077327 SPAG6 CT141|Repro-SA-1|pf16 sperm associated antigen 6 protein-coding chr9-8044 chr9 96102097 96102307 + 7.07 0.000 TTS (NR_033838) TTS (NR_033838) 14209 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr9-8859 chr9 135830201 135830411 + 7.07 0.000 intron (NM_015447, intron 7 of 16) L1MA9|LINE|L1 77240 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr4-7510 chr4 74649886 74650096 + 7.07 0.000 Intergenic Intergenic 144532 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr8-3476 chr8 100329401 100329611 + 7.07 0.000 intron (NM_001280539, intron 1 of 10) CR1-3_Croc|LINE|CR1 6698 NM_001280539 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr4-6544 chr4 176340177 176340387 + 7.07 0.000 Intergenic L2a|LINE|L2 20316 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr1-13161 chr1 202848492 202848702 + 7.07 0.000 Intergenic Intergenic -13157 NR_002929 148709 Hs.162880 NR_002929 ENSG00000234996 LOC148709 - actin gamma 1 pseudogene pseudo chr8-2051 chr8 119086508 119086718 + 7.07 0.000 intron (NM_006438, intron 1 of 5) intron (NM_006438, intron 1 of 5) -17831 NR_134297 101927513 Hs.676598 NR_134297 ENSG00000254278 LOC101927513 - uncharacterized LOC101927513 ncRNA chr14-4879 chr14 71521644 71521854 + 7.07 0.000 intron (NM_001354286, intron 4 of 24) L1ME3|LINE|L1 33888 NR_027046 145474 Hs.658241 NR_027046 LOC145474 - uncharacterized LOC145474 ncRNA chr12-2798 chr12 96719947 96720157 + 7.07 0.000 intron (NM_001306084, intron 49 of 67) Tigger17a|DNA|TcMar-Tigger -187205 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr1-7213 chr1 220475079 220475289 + 7.07 0.000 Intergenic LTR12C|LTR|ERV1 -52952 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr13-2950 chr13 44837179 44837389 + 7.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -27654 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr14-3977 chr14 31562574 31562784 + 7.07 0.000 intron (NR_120408, intron 2 of 9) AluY|SINE|Alu 1275 NM_025152 80224 Hs.288981 NM_025152 ENSG00000151413 NUBPL C14orf127|IND1|MC1DN21|huInd1 nucleotide binding protein like protein-coding chrX-5181 chrX 133382723 133382933 + 7.07 0.000 intron (NM_001448, intron 1 of 8) L1MC1|LINE|L1 32661 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr18-3309 chr18 54973696 54973906 + 7.07 0.000 Intergenic L2a|LINE|L2 -14340 NM_025214 80323 Hs.120790 NM_025214 ENSG00000166510 CCDC68 SE57-1 coiled-coil domain containing 68 protein-coding chr22-4246 chr22 47322308 47322518 + 7.07 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -23158 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr2-13684 chr2 164201187 164201397 + 7.07 0.000 Intergenic L1MB1|LINE|L1 367203 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr4-8299 chr4 143433590 143433800 + 7.07 0.000 exon (NM_002039, exon 3 of 10) exon (NM_002039, exon 3 of 10) -80007 NM_003601 8467 Hs.558422 NM_003601 ENSG00000153147 SMARCA5 ISWI|SNF2H|WCRF135|hISWI|hSNF2H SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding chr4-6230 chr4 61462635 61462845 + 7.07 0.000 intron (NM_001371343, intron 2 of 23) intron (NM_001371343, intron 2 of 23) 260568 NM_001371342 chr7-4221 chr7 155205641 155205851 + 7.07 0.000 Intergenic Intergenic -92026 NM_001346590 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr7-6325 chr7 143138804 143139014 + 7.07 0.000 intron (NM_002652, intron 2 of 3) intron (NM_002652, intron 2 of 3) 6832 NM_002652 5304 Hs.99949 NM_002652 ENSG00000159763 PIP GCDFP-15|GCDFP15|GPIP4 prolactin induced protein protein-coding chr2-7376 chr2 3723659 3723869 + 7.07 0.000 intron (NM_001287444, intron 2 of 10) L2b|LINE|L2 16922 NM_001365580 728597 Hs.304233 NM_001287444 ENSG00000214866 DCDC2C - doublecortin domain containing 2C protein-coding chr20-2038 chr20 1418561 1418771 + 7.07 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -25494 NR_037661 100528031 Hs.471933 NR_037661 FKBP1A-SDCBP2 - FKBP1A-SDCBP2 readthrough (NMD candidate) ncRNA chr4-3617 chr4 8409390 8409600 + 7.07 0.000 intron (NM_003501, intron 6 of 17) intron (NM_003501, intron 6 of 17) 31228 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr2-4811 chr2 50765173 50765383 + 7.07 0.000 intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) -69016 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA chr10-6426 chr10 19021294 19021504 + 7.07 0.000 Intergenic Intergenic -27402 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr16-2825 chr16 71595672 71595882 + 7.07 0.000 Intergenic L1PB1|LINE|L1 -18685 NM_000353 6898 Hs.161640 NM_000353 ENSG00000198650 TAT - tyrosine aminotransferase protein-coding chr11-6972 chr11 115160874 115161084 + 7.07 0.000 Intergenic L2b|LINE|L2 -172598 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr14-3135 chr14 68104505 68104715 + 7.07 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 281018 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr16-2509 chr16 89779766 89779976 + 7.07 0.000 exon (NM_001286167, exon 18 of 43) exon (NM_001286167, exon 18 of 43) 36776 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr3-10033 chr3 103456194 103456404 + 7.07 0.000 Intergenic L2c|LINE|L2 67817 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr4-4965 chr4 130071905 130072115 + 7.07 0.000 Intergenic LTR40a|LTR|ERVL 300391 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr15-2763 chr15 27527325 27527535 + 7.07 0.000 intron (NM_033223, intron 7 of 9) intron (NM_033223, intron 7 of 9) -366111 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr8-4574 chr8 127917672 127917882 + 7.07 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 30946 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr16-3898 chr16 76911084 76911294 + 7.07 0.000 Intergenic AluJr|SINE|Alu 42253 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr7-9567 chr7 143089855 143090065 + 7.07 0.000 intron (NM_001130026, intron 9 of 10) L1PA4|LINE|L1 -26175 NR_002140 89883 Hs.339818 NR_002140 OR6W1P OR6W1|sdolf olfactory receptor family 6 subfamily W member 1 pseudogene pseudo chr9-7630 chr9 38414383 38414593 + 7.07 0.000 intron (NM_001007563, intron 1 of 4) MIR3|SINE|MIR 9966 NM_001007563 347252 Hs.349705 NM_001007563 ENSG00000137142 IGFBPL1 IGFBP-RP4|IGFBPRP4|bA113O24.1 insulin like growth factor binding protein like 1 protein-coding chr5-7655 chr5 52864246 52864456 + 7.07 0.000 intron (NM_181501, intron 3 of 28) intron (NM_181501, intron 3 of 28) 76435 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr12-4921 chr12 68122008 68122218 + 7.07 0.000 Intergenic Intergenic 37627 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr6-7989 chr6 115554555 115554765 + 7.07 0.000 Intergenic Intergenic 89175 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr1-12517 chr1 22937024 22937234 + 7.07 0.000 Intergenic MamGypLTR1a|LTR|Gypsy 35737 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr2-3647 chr2 157341410 157341620 + 7.07 0.000 Intergenic HERVH-int|LTR|ERV1 -13803 NM_001009959 57471 Hs.443894 NM_020711 ENSG00000136541 ERMN JN|KIAA1189 ermin protein-coding chr2-5985 chr2 65795806 65796016 + 7.07 0.000 Intergenic AluY|SINE|Alu -363312 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2-6061 chr2 135984502 135984712 + 7.07 0.000 promoter-TSS (NR_110200) promoter-TSS (NR_110200) -569 NR_110199 101928243 Hs.602178 NR_110199 ENSG00000231890 DARS-AS1 - DARS antisense RNA 1 ncRNA chr1-9186 chr1 21394263 21394473 + 7.07 0.000 Intergenic MER41-int|LTR|ERV1 -45769 NR_046176 84224 Hs.325422 NM_032264 ENSG00000142794 NBPF3 AE2 NBPF member 3 protein-coding chr3-3178 chr3 183245130 183245340 + 7.07 0.000 intron (NM_015078, intron 15 of 29) intron (NM_015078, intron 15 of 29) -8018 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr1-5247 chr1 202210378 202210588 + 7.07 0.000 intron (NM_021636, intron 1 of 17) intron (NM_021636, intron 1 of 17) -3672 NM_001017404 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr10-4938 chr10 25501732 25501942 + 7.07 0.000 intron (NM_020752, intron 5 of 10) intron (NM_020752, intron 5 of 10) -149875 NR_108068 101929052 Hs.128298 NR_108067 ENSG00000280809 LINC00836 - long intergenic non-protein coding RNA 836 ncRNA chr3-6273 chr3 71637313 71637523 + 7.07 0.000 Intergenic Intergenic -53429 NM_001244810 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr19-6743 chr19 38562797 38563007 + 7.07 0.000 intron (NM_001042723, intron 89 of 104) intron (NM_001042723, intron 89 of 104) -33445 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr5-8509 chr5 133816832 133817042 + 7.07 0.000 Intergenic Intergenic -96740 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr19-5998 chr19 1390539 1390749 + 7.07 0.000 intron (NM_024407, intron 4 of 7) MER33|DNA|hAT-Charlie 6737 NM_024407 374291 Hs.211914 NM_024407 ENSG00000115286 NDUFS7 CI-20|CI-20KD|MC1DN3|MY017|PSST NADH:ubiquinone oxidoreductase core subunit S7 protein-coding chr7-6087 chr7 116978966 116979176 + 7.07 0.000 intron (NR_161423, intron 1 of 13) LTR33|LTR|ERVL -24737 NR_002330 93653 Hs.597516 NR_002330 ENSG00000227199 ST7-AS1 ST7AS1|ST7OT1 ST7 antisense RNA 1 ncRNA chr2-7343 chr2 641397 641607 + 7.07 0.000 Intergenic Intergenic 35202 NM_001352681 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr6-6174 chr6 6053860 6054070 + 7.07 0.000 Intergenic Intergenic -46360 NM_001278710 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding chr9-4283 chr9 112099126 112099336 + 7.07 0.000 intron (NM_022486, intron 9 of 16) AluJr|SINE|Alu 76066 NM_001282643 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr15-2541 chr15 43625276 43625486 + 7.07 0.000 Intergenic Intergenic -6581 NM_153700 161497 Hs.657395 NM_153700 ENSG00000242866 STRC DFNB16 stereocilin protein-coding chr5-4190 chr5 111116501 111116711 + 7.07 0.000 intron (NM_139281, intron 16 of 22) intron (NM_139281, intron 16 of 22) 24434 NM_139281 134430 Hs.533237 NM_139281 ENSG00000134987 WDR36 GLC1G|TA-WDRP|TAWDRP|UTP21 WD repeat domain 36 protein-coding chr18-2092 chr18 49743737 49743947 + 7.07 0.000 Intergenic Intergenic 69691 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr1-12512 chr1 22146974 22147184 + 7.07 0.000 Intergenic Intergenic -3982 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr3-6481 chr3 110273766 110273976 + 7.07 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 671043 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr4-7388 chr4 61559886 61560096 + 7.07 0.000 intron (NM_001371343, intron 4 of 23) L2c|LINE|L2 357819 NM_001371342 chr12-8268 chr12 125079903 125080113 + 7.07 0.000 intron (NM_001319839, intron 3 of 16) L1MB7|LINE|L1 14573 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr1-6766 chr1 76939171 76939381 + 7.07 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 71796 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr19-6608 chr19 29118184 29118394 + 7.07 0.000 Intergenic Intergenic 94862 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr9-1989 chr9 123165273 123165483 + 7.07 0.000 intron (NM_001171137, intron 6 of 18) intron (NM_001171137, intron 6 of 18) -49901 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chr3-11129 chr3 187498006 187498216 + 7.07 0.000 Intergenic Intergenic 51065 NR_146716 105374261 Hs.535726 NR_146716 LINC02041 - long intergenic non-protein coding RNA 2041 ncRNA chr13-3334 chr13 68418922 68419132 + 7.07 0.000 Intergenic Intergenic 466298 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chrX-1949 chrX 6318769 6318979 + 7.07 0.000 Intergenic Intergenic 65089 NR_039927 100616373 NR_039927 ENSG00000265284 MIR4770 - microRNA 4770 ncRNA chr3-10692 chr3 151251103 151251313 + 7.07 0.000 intron (NM_014879, intron 1 of 2) intron (NM_014879, intron 1 of 2) -2217 NM_001081455 9934 Hs.2465 NM_014879 ENSG00000174944 P2RY14 BPR105|GPR105|P2Y14 purinergic receptor P2Y14 protein-coding chr2-10055 chr2 37616386 37616596 + 7.07 0.000 Intergenic Intergenic 55708 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr5-8242 chr5 110610621 110610831 + 7.07 0.000 intron (NM_001039763, intron 8 of 13) intron (NM_001039763, intron 8 of 13) -96811 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr6-8265 chr6 138952722 138952932 + 7.07 0.000 intron (NM_031922, intron 1 of 19) AluSp|SINE|Alu 35434 NM_031922 85021 Hs.334603 NM_031922 ENSG00000135597 REPS1 NBIA7|RALBP1 RALBP1 associated Eps domain containing 1 protein-coding chr2-9158 chr2 211906698 211906908 + 7.07 0.000 intron (NM_001042599, intron 3 of 26) L1PREC2|LINE|L1 519557 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr21-1626 chr21 20994660 20994870 + 7.07 0.000 Intergenic MSTD|LTR|ERVL-MaLR -3644 NM_001352592 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr18-2794 chr18 3352081 3352291 + 7.07 0.000 Intergenic Intergenic -1627 NR_146506 105371964 Hs.105326 NR_146506 ENSG00000259256 LINC01895 - long intergenic non-protein coding RNA 1895 ncRNA chr7-5253 chr7 18389817 18390027 + 7.07 0.000 intron (NM_001321896, intron 1 of 12) intron (NM_001321896, intron 1 of 12) 99830 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr3-9284 chr3 42292960 42293170 + 7.07 0.000 Intergenic Kanga1|DNA|TcMar-Tc2 -26880 NM_000729 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr5-5311 chr5 127013272 127013482 + 7.07 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 17181 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr1-9754 chr1 54619034 54619244 + 7.07 0.000 intron (NM_176782, intron 2 of 7) MER5A|DNA|hAT-Charlie 4386 NM_176782 338094 Hs.234786 NM_176782 ENSG00000162391 FAM151A C1orf179 family with sequence similarity 151 member A protein-coding chr12-6913 chr12 23855180 23855390 + 7.07 0.000 intron (NM_001330785, intron 2 of 14) intron (NM_001330785, intron 2 of 14) 94385 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr7-6828 chr7 42239176 42239386 + 7.07 0.000 Intergenic MIRc|SINE|MIR -2072 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr15-3973 chr15 45552426 45552636 + 7.07 0.000 intron (NR_022014, intron 5 of 5) intron (NR_022014, intron 5 of 5) 15280 NR_145777 109617005 NR_145777 ENSG00000207516 SNORA41B - small nucleolar RNA, H/ACA box 41B snoRNA chr7-5701 chr7 69930264 69930474 + 7.07 0.000 intron (NM_015570, intron 2 of 18) L1MEc|LINE|L1 331894 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chrX-5177 chrX 133211443 133211653 + 7.07 0.000 Intergenic Intergenic 6806 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr8-5524 chr8 65945677 65945887 + 7.07 0.000 Intergenic L1MC2|LINE|L1 -69196 NM_001349432 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr2-12270 chr2 45822406 45822616 + 7.07 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 170836 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr9-5534 chr9 108186669 108186879 + 7.07 0.000 Intergenic Intergenic 669212 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr2-10530 chr2 232514194 232514404 + 7.07 0.000 Intergenic AluSz|SINE|Alu -6164 NM_001195129 646960 Hs.570310 NM_001195129 ENSG00000237412 PRSS56 MCOP6 serine protease 56 protein-coding chr20-2579 chr20 37727673 37727883 + 7.07 0.000 intron (NM_001281495, intron 2 of 16) intron (NM_001281495, intron 2 of 16) 33748 NM_030877 56259 Hs.472667 NM_030877 ENSG00000132792 CTNNBL1 C20orf33|NAP|P14L|PP8304|dJ633O20.1 catenin beta like 1 protein-coding chr4-3745 chr4 81047528 81047738 + 7.07 0.000 intron (NM_001201, intron 2 of 2) intron (NM_001201, intron 2 of 2) 16925 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr15-4812 chr15 72969932 72970142 + 7.07 0.000 Intergenic L1MC4|LINE|L1 -82426 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr18-2694 chr18 59744882 59745092 + 7.07 0.000 Intergenic Intergenic -47564 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr2-8296 chr2 104928083 104928293 + 7.07 0.000 Intergenic Intergenic -55593 NR_110373 102682016 Hs.638438 NR_110373 ENSG00000229743 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA chr12-6022 chr12 108483674 108483884 + 7.07 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -10090 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr12-6439 chr12 88747074 88747284 + 7.07 0.000 Intergenic Intergenic -166706 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr22-2822 chr22 43309561 43309771 + 7.07 0.000 intron (NM_173050, intron 3 of 21) L2a|LINE|L2 33706 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr11-10204 chr11 96608100 96608310 + 7.07 0.000 Intergenic Intergenic 99780 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr1-7149 chr1 205260039 205260249 + 7.07 0.000 intron (NM_001331034, intron 1 of 3) intron (NM_001331034, intron 1 of 3) 2947 NM_001331034 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr3-2694 chr3 53478094 53478304 + 7.07 0.000 Intergenic Intergenic -16412 NM_001128840 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr5-5214 chr5 115088178 115088388 + 7.07 0.000 Intergenic LTR16C|LTR|ERVL 81625 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr8-6723 chr8 86987964 86988174 + 7.07 0.000 intron (NM_173538, intron 4 of 10) L1PA16|LINE|L1 121654 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chrX-3965 chrX 12605483 12605693 + 7.07 0.000 intron (NM_001368400, intron 1 of 15) L2a|LINE|L2 106908 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr12-5164 chr12 102513241 102513451 + 7.07 0.000 Intergenic Intergenic -32783 NM_000618 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr17-8231 chr17 65071893 65072103 + 7.07 0.000 Intergenic Intergenic -15258 NM_006572 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr16-3844 chr16 66416047 66416257 + 7.07 0.000 Intergenic L2c|LINE|L2 7628 NR_046242 100505865 Hs.314372 NR_046242 LINC00920 - long intergenic non-protein coding RNA 920 ncRNA chr8-5543 chr8 71054031 71054241 + 7.07 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 302570 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr13-3860 chr13 50839834 50840044 + 7.07 0.000 intron (NM_001306135, intron 1 of 1) MIRb|SINE|MIR 4000 NM_198989 220107 Hs.673860 NM_198989 ENSG00000186047 DLEU7 - deleted in lymphocytic leukemia 7 protein-coding chr15-4730 chr15 68193863 68194073 + 7.07 0.000 non-coding (NR_104583, exon 2 of 2) non-coding (NR_104583, exon 2 of 2) 12142 NM_001031733 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr10-2860 chr10 74081233 74081443 + 7.07 0.000 intron (NM_014000, intron 6 of 21) intron (NM_014000, intron 6 of 21) 69490 NR_135191 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr19-4550 chr19 10450585 10450795 + 7.07 0.000 intron (NM_001111309, intron 5 of 14) intron (NM_001111309, intron 5 of 14) -2242 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr1-12794 chr1 82485790 82486000 + 7.07 0.000 Intergenic Intergenic -417288 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr9-4347 chr9 129648447 129648657 + 7.07 0.000 Intergenic Intergenic -6383 NM_001202403 140459 Hs.125037 NM_017873 ENSG00000148331 ASB6 - ankyrin repeat and SOCS box containing 6 protein-coding chr1-14713 chr1 64525413 64525623 + 7.07 0.000 intron (NM_001293274, intron 1 of 25) intron (NM_001293274, intron 1 of 25) 19604 NM_001293274 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr1-12860 chr1 102752521 102752731 + 7.07 0.000 Intergenic Intergenic 355870 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chrX-4185 chrX 34486102 34486312 + 7.07 0.000 Intergenic Intergenic 171078 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr1-6564 chr1 32316614 32316824 + 7.07 0.000 exon (NM_004964, exon 3 of 14) exon (NM_004964, exon 3 of 14) 19514 NM_023009 65108 Hs.75061 NM_023009 ENSG00000175130 MARCKSL1 F52|MACMARCKS|MLP|MLP1|MRP MARCKS like 1 protein-coding chr20-1405 chr20 25585439 25585649 + 7.07 0.000 promoter-TSS (NM_001318226) promoter-TSS (NM_001318226) -13 NM_001318226 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr19-5248 chr19 45011520 45011730 + 7.07 0.000 intron (NM_006509, intron 2 of 10) AluSz|SINE|Alu 10161 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr10-8262 chr10 75653232 75653442 + 7.07 0.000 intron (NR_131178, intron 1 of 7) intron (NR_131178, intron 1 of 7) 5828 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr1-10334 chr1 153464359 153464569 + 7.07 0.000 Intergenic Intergenic -3813 NM_002963 6278 Hs.112408 NM_002963 ENSG00000143556 S100A7 PSOR1|S100A7c S100 calcium binding protein A7 protein-coding chr11-5951 chr11 17021591 17021801 + 7.07 0.000 Intergenic MLT2B4|LTR|ERVL -7282 NM_175058 144100 Hs.12332 NM_175058 ENSG00000166689 PLEKHA7 - pleckstrin homology domain containing A7 protein-coding chr4-8142 chr4 127698890 127699100 + 7.07 0.000 intron (NM_015693, intron 8 of 15) intron (NM_015693, intron 8 of 15) -31405 NM_031291 83447 Hs.149030 NM_031291 ENSG00000151475 SLC25A31 AAC4|ANT 4|ANT4|SFEC35kDa solute carrier family 25 member 31 protein-coding chr16-6526 chr16 62908708 62908918 + 7.07 0.000 Intergenic Intergenic -872375 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr12-6988 chr12 30300576 30300786 + 7.07 0.000 Intergenic Intergenic 376563 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr14-3271 chr14 79470428 79470638 + 7.07 0.000 intron (NR_073547, intron 15 of 20) MLT1A1|LTR|ERVL-MaLR 191153 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr3-11162 chr3 189792667 189792877 + 7.07 0.000 intron (NM_001329146, intron 1 of 10) intron (NM_001329146, intron 1 of 10) 3113 NM_001329145 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr6-8001 chr6 116646851 116647061 + 7.07 0.000 intron (NR_154589, intron 9 of 10) L2a|LINE|L2 21810 NM_145062 221302 Hs.29857 NM_145062 ENSG00000153975 ZUP1 C6orf113|DUB|ZUFSP zinc finger containing ubiquitin peptidase 1 protein-coding chr22-1866 chr22 39893859 39894069 + 7.07 0.000 promoter-TSS (NM_152512) promoter-TSS (NM_152512) -204 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr2-2752 chr2 188388255 188388465 + 7.07 0.000 intron (NM_016315, intron 2 of 11) AluJr|SINE|Alu 90868 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr1-13122 chr1 197423106 197423316 + 7.07 0.000 intron (NM_001257966, intron 6 of 9) MER134|DNA?|DNA? 154959 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr8-7121 chr8 119917414 119917624 + 7.07 0.000 intron (NM_001283012, intron 1 of 6) LTR5_Hs|LTR|ERVK 43797 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr20-3055 chr20 3350437 3350647 + 7.07 0.000 intron (NM_001009984, intron 7 of 36) HAL1M8|LINE|L1 57120 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr9-3863 chr9 132461892 132462102 + 7.07 0.000 intron (NM_001282957, intron 1 of 5) intron (NM_001282957, intron 1 of 5) 51786 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr6-4505 chr6 37484236 37484446 + 7.07 0.000 intron (NM_138493, intron 3 of 3) intron (NM_138493, intron 3 of 3) 15552 NM_138493 154467 Hs.284207 NM_138493 ENSG00000198937 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding chr3-10235 chr3 122879311 122879521 + 7.07 0.000 3' UTR (NM_032839, exon 9 of 9) 3' UTR (NM_032839, exon 9 of 9) -7097 NR_024618 100129550 Hs.61558 NR_024618 ENSG00000273033 LINC02035 - long intergenic non-protein coding RNA 2035 ncRNA chr15-2234 chr15 98442601 98442811 + 7.07 0.000 intron (NM_182562, intron 5 of 6) intron (NM_182562, intron 5 of 6) -21708 NR_146567 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chr2-14221 chr2 209786246 209786456 + 7.07 0.000 intron (NM_032504, intron 5 of 63) intron (NM_032504, intron 5 of 63) 14358 NM_032504 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr2-13578 chr2 156652205 156652415 + 7.07 0.000 Intergenic Intergenic 215931 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr2-10134 chr2 71238665 71238875 + 7.07 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -11667 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr1-9608 chr1 45321832 45322042 + 7.07 0.000 Intergenic LTR7|LTR|ERV1 -4958 NM_032756 84842 Hs.162717 NM_032756 ENSG00000186603 HPDL 4-HPPD-L|GLOXD1 4-hydroxyphenylpyruvate dioxygenase like protein-coding chr8-6235 chr8 38761193 38761403 + 7.07 0.000 intron (NM_001352804, intron 1 of 10) intron (NM_001352804, intron 1 of 10) 4023 NM_001352797 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr14-4169 chr14 78604766 78604976 + 7.07 0.000 intron (NM_004796, intron 1 of 16) intron (NM_004796, intron 1 of 16) 201152 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr3-7722 chr3 50488620 50488830 + 7.07 0.000 intron (NM_001291101, intron 1 of 37) AluY|SINE|Alu 14909 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr3-8426 chr3 111985190 111985400 + 7.07 0.000 intron (NM_001272069, intron 2 of 5) intron (NM_001272069, intron 2 of 5) 6269 NM_018394 55347 Hs.477115 NM_018394 ENSG00000144827 ABHD10 - abhydrolase domain containing 10 protein-coding chr1-9763 chr1 54839327 54839537 + 7.07 0.000 intron (NM_001110533, intron 9 of 9) AluSx1|SINE|Alu 33369 NM_001110533 163747 Hs.376018 NM_152607 ENSG00000162398 LEXM C1orf177|LEM lymphocyte expansion molecule protein-coding chrX-1890 chrX 133583954 133584164 + 7.07 0.000 intron (NM_001164619, intron 6 of 6) intron (NM_001164619, intron 6 of 6) -168570 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr11-8388 chr11 92941616 92941826 + 7.07 0.000 Intergenic Intergenic -26093 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr12-3002 chr12 123219383 123219593 + 7.07 0.000 intron (NR_103517, intron 6 of 23) AluY|SINE|Alu 13653 NM_022782 10198 Hs.577404 NM_022782 ENSG00000051825 MPHOSPH9 MPP-9|MPP9 M-phase phosphoprotein 9 protein-coding chr12-3605 chr12 54696478 54696688 + 7.07 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -48218 NM_053283 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr1-14167 chr1 32749343 32749553 + 7.07 0.000 intron (NM_020888, intron 1 of 6) MIR3|SINE|MIR -4551 NM_001369553 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr7-3494 chr7 2775139 2775349 + 7.07 0.000 intron (NM_007353, intron 2 of 3) intron (NM_007353, intron 2 of 3) -12104 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr17-8359 chr17 74197267 74197477 + 7.07 0.000 Intergenic Intergenic -6306 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr1-8535 chr1 157403666 157403876 + 7.07 0.000 Intergenic Intergenic 148744 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr7-8244 chr7 35538888 35539098 + 7.07 0.000 Intergenic Intergenic 156142 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding chr8-5483 chr8 50270291 50270501 + 7.07 0.000 intron (NR_135797, intron 2 of 20) intron (NR_135797, intron 2 of 20) 106265 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr17-3155 chr17 59471901 59472111 + 7.07 0.000 intron (NR_110813, intron 2 of 2) AluJb|SINE|Alu 54851 NR_110813 101927728 Hs.569720 NR_110813 ENSG00000265313 LINC01476 - long intergenic non-protein coding RNA 1476 ncRNA chr11-8014 chr11 14201240 14201450 + 7.07 0.000 intron (NM_006108, intron 6 of 15) AluY|SINE|Alu 157140 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr12-6086 chr12 121866353 121866563 + 7.07 0.000 intron (NM_001171993, intron 1 of 15) intron (NM_001171993, intron 1 of 15) -7599 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr10-1631 chr10 78468709 78468919 + 7.07 0.000 Intergenic SVA_D|Retroposon|SVA 201472 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr9-8398 chr9 119561957 119562167 + 7.07 0.000 Intergenic Intergenic -192627 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr5-8774 chr5 148427570 148427780 + 7.07 0.000 exon (NM_030793, exon 15 of 22) exon (NM_030793, exon 15 of 22) 43717 NM_205836 81545 Hs.483772 NM_030793 ENSG00000145868 FBXO38 Fbx38|HMN2D|MOKA|SP329 F-box protein 38 protein-coding chr1-8401 chr1 81063182 81063392 + 7.07 0.000 Intergenic Intergenic -242905 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr3-9936 chr3 89108197 89108407 + 7.07 0.000 intron (NM_182644, intron 1 of 6) intron (NM_182644, intron 1 of 6) 681 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr4-5794 chr4 80897749 80897959 + 7.07 0.000 intron (NM_152770, intron 4 of 5) LTR1D1|LTR|ERV1 -132854 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr2-2896 chr2 219016157 219016367 + 7.07 0.000 TTS (NR_046086) TTS (NR_046086) 14047 NR_046086 100129175 Hs.147762 NR_046086 ENSG00000224090 LOC100129175 - uncharacterized LOC100129175 ncRNA chr5-2972 chr5 176873655 176873865 + 7.07 0.000 intron (NM_133369, intron 6 of 14) MIR3|SINE|MIR 25586 NM_002115 3101 Hs.411695 NM_002115 ENSG00000160883 HK3 HKIII|HXK3 hexokinase 3 protein-coding chr6-7572 chr6 72400117 72400327 + 7.07 0.000 intron (NM_001350433, intron 25 of 25) intron (NM_001350433, intron 25 of 25) 33476 NM_001168411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr3-2755 chr3 140823697 140823907 + 7.07 0.000 Intergenic Intergenic -118034 NM_001104647 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr1-9073 chr1 15595282 15595492 + 7.07 0.000 Intergenic Intergenic -10336 NM_024758 79814 Hs.461532 NM_024758 ENSG00000116771 AGMAT - agmatinase protein-coding chr5-7958 chr5 81060797 81061007 + 7.07 0.000 intron (NM_006909, intron 2 of 26) L1ME4a|LINE|L1 -99995 NR_105015 102524628 Hs.737159 NR_105015 ENSG00000251450 RASGRF2-AS1 - RASGRF2 antisense RNA 1 ncRNA chr5-5772 chr5 173582481 173582691 + 7.07 0.000 TTS (NR_027109) TTS (NR_027109) 2952 NR_027108 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr3-8629 chr3 171136010 171136220 + 7.07 0.000 intron (NM_001161561, intron 14 of 31) intron (NM_001161561, intron 14 of 31) -29356 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr12-3808 chr12 64912563 64912773 + 7.07 0.000 intron (NR_033988, intron 2 of 2) intron (NR_033988, intron 2 of 2) 28894 NR_033988 400046 Hs.591032 NR_033988 ENSG00000255693 LINC02389 - long intergenic non-protein coding RNA 2389 ncRNA chr1-16006 chr1 197984432 197984642 + 7.07 0.000 Intergenic Intergenic 67165 NM_001370213 56956 Hs.442578 NM_020204 ENSG00000143355 LHX9 - LIM homeobox 9 protein-coding chr8-5607 chr8 95095647 95095857 + 7.07 0.000 intron (NR_148914, intron 9 of 11) AluSz6|SINE|Alu -22570 NR_132986 105375650 Hs.665518 NR_132986 ENSG00000245080 MIR3150BHG - MIR3150B host gene ncRNA chr17-5310 chr17 27612564 27612774 + 7.07 0.000 intron (NM_014238, intron 19 of 20) intron (NM_014238, intron 19 of 20) -18519 NM_009587 3965 Hs.81337 NM_002308 ENSG00000168961 LGALS9 HUAT|LGALS9A galectin 9 protein-coding chr12-3236 chr12 57621671 57621881 + 7.07 0.000 non-coding (NR_120450, exon 1 of 4) non-coding (NR_120450, exon 1 of 4) 127 NR_120450 101927583 Hs.624788 NR_120450 LOC101927583 - uncharacterized LOC101927583 ncRNA chr10-6518 chr10 66062977 66063187 + 7.07 0.000 intron (NM_001127384, intron 15 of 17) intron (NM_001127384, intron 15 of 17) 491657 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr1-16518 chr1 230745386 230745596 + 7.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -1893 NM_016452 10753 Hs.498021 NM_006615 ENSG00000135773 CAPN9 GC36|nCL-4 calpain 9 protein-coding chr9-7500 chr9 31944071 31944281 + 7.07 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger -440427 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr13-3610 chr13 29499614 29499824 + 7.07 0.000 intron (NM_015233, intron 7 of 8) intron (NM_015233, intron 7 of 8) -11969 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr11-4101 chr11 33859762 33859972 + 7.07 0.000 intron (NM_001142315, intron 3 of 3) intron (NM_001142315, intron 3 of 3) 10011 NM_001142316 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr10-8143 chr10 70567579 70567789 + 7.07 0.000 3' UTR (NM_014431, exon 20 of 20) 3' UTR (NM_014431, exon 20 of 20) 35057 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr19-4080 chr19 13207869 13208079 + 7.07 0.000 exon (NM_001127222, exon 47 of 47) exon (NM_001127222, exon 47 of 47) 57563 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr9-5529 chr9 107841410 107841620 + 7.07 0.000 Intergenic Intergenic -351746 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr3-9503 chr3 50955632 50955842 + 7.07 0.000 intron (NM_004947, intron 5 of 52) L1PREC2|LINE|L1 280657 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr7-6005 chr7 104403532 104403742 + 7.07 0.000 intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 74981 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr5-4946 chr5 76320107 76320317 + 7.07 0.000 intron (NM_001297716, intron 12 of 12) L1MC2|LINE|L1 -83073 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr1-7849 chr1 83343687 83343897 + 7.07 0.000 Intergenic Intergenic -102262 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr3-11219 chr3 194757677 194757887 + 7.07 0.000 intron (NR_037891, intron 3 of 3) intron (NR_037891, intron 3 of 3) 10927 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr4-8075 chr4 122858898 122859108 + 7.07 0.000 intron (NM_001361665, intron 1 of 2) intron (NM_001361665, intron 1 of 2) 32172 NM_001361665 2247 Hs.284244 NM_002006 ENSG00000138685 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 protein-coding chr2-8716 chr2 157712413 157712623 + 7.07 0.000 Intergenic MSTB|LTR|ERVL-MaLR -83654 NM_145259 130399 Hs.562901 NM_145259 ENSG00000123612 ACVR1C ACVRLK7|ALK7 activin A receptor type 1C protein-coding chr8-1924 chr8 39042138 39042348 + 7.07 0.000 intron (NR_027638, intron 12 of 20) intron (NR_027638, intron 12 of 20) -23558 NR_145988 109616979 NR_145736 ENSG00000207199 SNORD38D - small nucleolar RNA, C/D box 38D snoRNA chr4-5716 chr4 40807124 40807334 + 7.07 0.000 intron (NM_024677, intron 11 of 11) intron (NM_024677, intron 11 of 11) 49926 NM_001166051 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr7-5069 chr7 2058571 2058781 + 7.07 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 30376 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr2-13429 chr2 142553198 142553408 + 7.07 0.000 Intergenic Intergenic -324361 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr13-2927 chr13 19641139 19641349 + 7.07 0.000 intron (NM_017520, intron 1 of 13) AluSc8|SINE|Alu 7585 NM_017520 54737 Hs.269654 NM_017520 ENSG00000196199 MPHOSPH8 HSMPP8|TWA3|mpp8 M-phase phosphoprotein 8 protein-coding chr9-7318 chr9 11962534 11962744 + 7.07 0.000 Intergenic MER6B|DNA|TcMar-Tigger -730746 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr7-4027 chr7 152747579 152747789 + 7.07 0.000 Intergenic AluJo|SINE|Alu -12065 NR_146950 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr8-5658 chr8 112092519 112092729 + 7.07 0.000 Intergenic L1P4b|LINE|L1 -550869 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr15-2849 chr15 40925507 40925717 + 7.07 0.000 Intergenic CpG -3728 NM_019074 54567 Hs.511076 NM_019074 ENSG00000128917 DLL4 AOS6|delta4|hdelta2 delta like canonical Notch ligand 4 protein-coding chr7-8460 chr7 48197051 48197261 + 7.07 0.000 intron (NM_152701, intron 2 of 61) intron (NM_152701, intron 2 of 61) 25698 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chrX-1512 chrX 14449506 14449716 + 7.07 0.000 Intergenic L1P4d|LINE|L1 -79687 NM_001171942 2742 Hs.2700 NM_002063 ENSG00000101958 GLRA2 GLR glycine receptor alpha 2 protein-coding chr3-5050 chr3 38717933 38718143 + 7.07 0.000 intron (NM_006514, intron 20 of 26) intron (NM_006514, intron 20 of 26) -68351 NM_001354701 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr19-4811 chr19 35274745 35274955 + 7.07 0.000 intron (NM_001321150, intron 5 of 7) MER102a|DNA|hAT-Charlie 5888 NM_207291 7392 Hs.454534 NM_003367 ENSG00000105698 USF2 FIP|bHLHb12 upstream transcription factor 2, c-fos interacting protein-coding chr5-9158 chr5 177041039 177041249 + 7.07 0.000 exon (NM_001308214, exon 2 of 6) exon (NM_001308214, exon 2 of 6) 18448 NM_001308221 23567 Hs.484259 NM_012279 ENSG00000113761 ZNF346 JAZ|Zfp346 zinc finger protein 346 protein-coding chr9-8078 chr9 98240530 98240740 + 7.07 0.000 intron (NR_051978, intron 2 of 11) intron (NR_051978, intron 2 of 11) -11418 NR_106913 102465514 NR_106913 ENSG00000278412 MIR6854 hsa-mir-6854 microRNA 6854 ncRNA chr15-3007 chr15 55635163 55635373 + 7.07 0.000 intron (NM_173814, intron 15 of 19) AluSx4|SINE|Alu -46297 NM_015617 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr13-1866 chr13 22943395 22943605 + 7.07 0.000 Intergenic Intergenic -27131 NR_138043 100996930 Hs.380803 NR_138043 LINC00621 - long intergenic non-protein coding RNA 621 ncRNA chr3-9940 chr3 89507072 89507282 + 7.07 0.000 Intergenic Intergenic 399556 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr10-8206 chr10 72366895 72367105 + 7.07 0.000 TTS (NM_001363513) TTS (NM_001363513) -12081 NM_001002762 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr13-3947 chr13 60807700 60807910 + 7.07 0.000 Intergenic Intergenic 134850 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr11-8074 chr11 34491367 34491577 + 7.07 0.000 intron (NM_001243081, intron 2 of 5) intron (NM_001243081, intron 2 of 5) 20252 NM_198381 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr3-3181 chr3 183819000 183819210 + 7.07 0.000 intron (NM_024871, intron 1 of 2) intron (NM_024871, intron 1 of 2) 6472 NM_024871 79929 Hs.478465 NM_024871 ENSG00000180834 MAP6D1 MAPO6D1|SL21 MAP6 domain containing 1 protein-coding chr8-6451 chr8 61347236 61347446 + 7.07 0.000 intron (NM_173519, intron 2 of 5) L2b|LINE|L2 59371 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr15-2415 chr15 68335799 68336009 + 7.07 0.000 intron (NM_001004439, intron 11 of 29) intron (NM_001004439, intron 11 of 29) 58159 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr9-4639 chr9 113648071 113648281 + 7.07 0.000 Intergenic Intergenic 54047 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr9-5979 chr9 134514962 134515172 + 7.07 0.000 Intergenic Intergenic 108507 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr5-8776 chr5 148551091 148551301 + 7.07 0.000 intron (NM_001040172, intron 1 of 5) intron (NM_001040172, intron 1 of 5) 85865 NM_001040169 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr6-6247 chr6 32512861 32513071 + 7.07 0.000 Intergenic LTR14|LTR|ERVK 17321 NM_002125 3127 Hs.485130 NM_002125 ENSG00000198502 HLA-DRB5 - major histocompatibility complex, class II, DR beta 5 protein-coding chr10-8328 chr10 79123607 79123817 + 7.07 0.000 intron (NM_020338, intron 2 of 24) intron (NM_020338, intron 2 of 24) 54746 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr1-10454 chr1 160789613 160789823 + 7.07 0.000 Intergenic Intergenic -6456 NM_001033667 4063 Hs.403857 NM_002348 ENSG00000122224 LY9 CD229|SLAMF3|hly9|mLY9 lymphocyte antigen 9 protein-coding chrX-3754 chrX 128230359 128230569 + 7.07 0.000 Intergenic L1MEg|LINE|L1 -178061 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr2-8885 chr2 177503743 177503953 + 7.07 0.000 intron (NM_003659, intron 14 of 19) intron (NM_003659, intron 14 of 19) 48948 NM_152517 150737 Hs.447659 NM_152517 ENSG00000196659 TTC30B IFT70|IFT70B|fleer tetratricopeptide repeat domain 30B protein-coding chr15-4932 chr15 77933861 77934071 + 7.07 0.000 Intergenic Intergenic -7120 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr1-5764 chr1 150675946 150676156 + 7.07 0.000 intron (NM_018178, intron 2 of 4) AluJb|SINE|Alu 21103 NM_018178 55204 Hs.203699 NM_018178 ENSG00000143457 GOLPH3L GPP34R golgi phosphoprotein 3 like protein-coding chr13-2443 chr13 48479176 48479386 + 7.07 0.000 intron (NM_000321, intron 26 of 26) intron (NM_000321, intron 26 of 26) -34612 NM_005767 10161 Hs.123464 NM_005767 ENSG00000139679 LPAR6 ARWH1|HYPT8|LAH3|P2RY5|P2Y5 lysophosphatidic acid receptor 6 protein-coding chr5-7837 chr5 68628804 68629014 + 7.07 0.000 Intergenic MIRb|SINE|MIR 336332 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr1-16391 chr1 223153621 223153831 + 7.07 0.000 Intergenic L2a|LINE|L2 -10478 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr1-14102 chr1 30840829 30841039 + 7.07 0.000 Intergenic Intergenic 16282 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr22-3685 chr22 24077874 24078084 + 7.07 0.000 intron (NM_012295, intron 19 of 36) intron (NM_012295, intron 19 of 36) 66609 NM_001199281 23523 Hs.517478 NM_012295 ENSG00000099991 CABIN1 CAIN|KB-318B8.7|PPP3IN calcineurin binding protein 1 protein-coding chr2-9006 chr2 195358628 195358838 + 7.07 0.000 Intergenic Intergenic -298225 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr2-12607 chr2 71214096 71214306 + 7.07 0.000 intron (NM_020459, intron 1 of 3) MIRb|SINE|MIR 12902 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr5-7421 chr5 28263125 28263335 + 7.07 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 24435 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr10-8962 chr10 118812918 118813128 + 7.07 0.000 Intergenic AluSz6|SINE|Alu -58053 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr3-7081 chr3 178551798 178552008 + 7.07 0.000 intron (NR_126560, intron 5 of 7) intron (NR_126560, intron 5 of 7) -6947 NM_005832 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr18-1560 chr18 27524979 27525189 + 7.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR -182428 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr6-8071 chr6 123107667 123107877 + 7.07 0.000 Intergenic L1PA8A|LINE|L1 111537 NM_001010852 134829 Hs.486361 NM_001010852 ENSG00000146352 CLVS2 C6orf212|C6orf213|RLBP1L2|bA160A10.4 clavesin 2 protein-coding chr3-9127 chr3 31064141 31064351 + 7.07 0.000 Intergenic Intergenic 97541 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr6-4533 chr6 39550101 39550311 + 7.07 0.000 intron (NM_001289020, intron 10 of 21) intron (NM_001289020, intron 10 of 21) -118816 NM_001289024 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr11-8056 chr11 26095314 26095524 + 7.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR -93704 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr11-5255 chr11 29563009 29563219 + 7.07 0.000 Intergenic AluY|SINE|Alu -31299 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr17-4931 chr17 76974543 76974753 + 7.07 0.000 Intergenic MER52C|LTR|ERV1 -5449 NR_136417 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr3-5707 chr3 15110168 15110378 + 7.07 0.000 Intergenic Intergenic -11116 NR_126155 64145 Hs.475565 NM_022340 ENSG00000131381 RBSN Rabenosyn-5|ZFYVE20 rabenosyn, RAB effector protein-coding chr18-1944 chr18 35822484 35822694 + 7.07 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 82337 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr17-5997 chr17 77728387 77728597 + 7.07 0.000 promoter-TSS (NR_104134) promoter-TSS (NR_104134) 67 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr5-9126 chr5 174760878 174761088 + 7.07 0.000 Intergenic MER44B|DNA|TcMar-Tigger 9249 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr6-3765 chr6 15268740 15268950 + 7.07 0.000 intron (NM_001267040, intron 1 of 17) intron (NM_001267040, intron 1 of 17) 19990 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr5-6886 chr5 128965589 128965799 + 7.07 0.000 5' UTR (NM_001317984, exon 1 of 11) 5' UTR (NM_001317984, exon 1 of 11) 206 NM_001017372 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chrX-1177 chrX 53194402 53194612 + 7.07 0.000 TTS (NR_106955) TTS (NR_106955) 981 NR_106955 102465539 NR_106955 ENSG00000276575 MIR6895 hsa-mir-6895 microRNA 6895 ncRNA chr18-1137 chr18 7204157 7204367 + 7.07 0.000 Intergenic SVA_B|Retroposon|SVA -26842 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr16-5208 chr16 20398649 20398859 + 7.07 0.000 intron (NM_174924, intron 2 of 11) MIRb|SINE|MIR 5983 NM_174924 204474 Hs.376025 NM_174924 ENSG00000169340 PDILT PDIA7 protein disulfide isomerase like, testis expressed protein-coding chr20-1525 chr20 43533282 43533492 + 7.07 0.000 exon (NM_015478, exon 10 of 19) exon (NM_015478, exon 10 of 19) 18946 NM_015478 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chrX-4871 chrX 105669711 105669921 + 7.07 0.000 intron (NM_017416, intron 6 of 10) L1MD1|LINE|L1 -152723 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr10-3930 chr10 90658841 90659051 + 7.07 0.000 Intergenic L1M3f|LINE|L1 -118141 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr10-8359 chr10 80324975 80325185 + 7.07 0.000 Intergenic L1ME3Cz|LINE|L1 -19665 NR_070309 84332 Hs.741500 NM_032372 ENSG00000133665 DYDC2 - DPY30 domain containing 2 protein-coding chr2-8762 chr2 162907400 162907610 + 7.07 0.000 Intergenic Intergenic -68738 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr1-6779 chr1 81111959 81112169 + 7.07 0.000 Intergenic Intergenic -194128 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr6-3557 chr6 50426151 50426361 + 7.07 0.000 Intergenic L1MC4|LINE|L1 -287288 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr19-3920 chr19 46561359 46561569 + 7.07 0.000 intron (NM_001370550, intron 1 of 2) LTR37-int|LTR|ERV1 39452 NM_001370551 100506012 Hs.671661 NM_001205281 ENSG00000230510 PPP5D1 - PPP5 tetratricopeptide repeat domain containing 1 protein-coding chr17-5081 chr17 4251652 4251862 + 7.07 0.000 intron (NR_047571, intron 1 of 23) L1ME1|LINE|L1 12090 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chrX-5461 chrX 154802051 154802261 + 7.07 0.000 intron (NM_001166462, intron 1 of 12) intron (NM_001166462, intron 1 of 12) 3329 NM_001166460 4354 Hs.496984 NM_002436 ENSG00000130830 MPP1 AAG12|DXS552E|EMP55|MRG1|PEMP membrane palmitoylated protein 1 protein-coding chr4-2452 chr4 175378423 175378633 + 7.07 0.000 Intergenic L1MDa|LINE|L1 409148 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr4-7700 chr4 88521487 88521697 + 7.07 0.000 exon (NM_001042616, exon 2 of 2) exon (NM_001042616, exon 2 of 2) 2184 NM_032906 100996939 Hs.26136 NM_032906 ENSG00000145337 PYURF PREY PIGY upstream reading frame protein-coding chr1-4397 chr1 182490942 182491152 + 7.07 0.000 intron (NM_001366934, intron 9 of 22) AluJb|SINE|Alu 40901 NM_001137669 353299 Hs.121200 NM_032267 ENSG00000121446 RGSL1 RGSL|RGSL2 regulator of G protein signaling like 1 protein-coding chr10-7344 chr10 727854 728064 + 7.07 0.000 Intergenic Intergenic -38291 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chrX-2116 chrX 26873354 26873564 + 7.07 0.000 Intergenic LTR12C|LTR|ERV1 315122 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr2-8396 chr2 113953750 113953960 + 7.07 0.000 intron (NM_005721, intron 10 of 11) L1MC4|LINE|L1 -15467 NR_148507 440900 Hs.662205 NR_034128 ENSG00000234199 LINC01191 VIN|lnc-ACTR3 long intergenic non-protein coding RNA 1191 ncRNA chr2-10081 chr2 46763246 46763456 + 7.07 0.000 TTS (NM_144949) TTS (NM_144949) -53317 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr6-5052 chr6 113464611 113464821 + 7.07 0.000 Intergenic Intergenic -31269 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr11-3753 chr11 45181770 45181980 + 7.07 0.000 exon (NM_001359633, exon 3 of 8) exon (NM_001359633, exon 3 of 8) 34532 NM_001256696 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chrX-4864 chrX 105038121 105038331 + 7.07 0.000 intron (NM_017416, intron 2 of 10) L2|LINE|L2 182467 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr5-5167 chr5 109656852 109657062 + 7.07 0.000 Intergenic Intergenic -32409 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr11-7863 chr11 119484634 119484844 + 7.07 0.000 intron (NR_034160, intron 3 of 3) (TG)n|Simple_repeat|Simple_repeat -59754 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr7-4719 chr7 50384366 50384576 + 7.07 0.000 intron (NM_001220768, intron 4 of 4) intron (NM_001220768, intron 4 of 4) 65423 NM_001291842 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr13-2975 chr13 74444555 74444765 + 7.07 0.000 Intergenic Intergenic 25487 NR_047005 100874151 Hs.564552 NR_047005 ENSG00000226240 LINC00381 - long intergenic non-protein coding RNA 381 ncRNA chr3-3665 chr3 138051990 138052200 + 7.07 0.000 Intergenic L2b|LINE|L2 41930 NM_016369 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr1-15907 chr1 184786687 184786897 + 7.07 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -31934 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr2-14354 chr2 218666036 218666246 + 7.07 0.000 intron (NM_022453, intron 6 of 9) intron (NM_022453, intron 6 of 9) 5861 NM_022453 64320 Hs.471403 NM_022453 ENSG00000163481 RNF25 AO7 ring finger protein 25 protein-coding chr8-5186 chr8 102787482 102787692 + 7.07 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -19235 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr3-7990 chr3 179929011 179929221 + 7.07 0.000 intron (NM_001349396, intron 1 of 13) Tigger19a|DNA|TcMar-Tigger 29579 NR_110061 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr3-7602 chr3 14557324 14557534 + 7.07 0.000 Intergenic Intergenic -17087 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chrX-3350 chrX 134321559 134321769 + 7.07 0.000 Intergenic Intergenic -51648 NM_001015877 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chrX-2055 chrX 18648305 18648515 + 7.07 0.000 intron (NM_000330, intron 3 of 5) AluJb|SINE|Alu 23693 NM_000330 6247 Hs.715725 NM_000330 ENSG00000102104 RS1 RS|XLRS1 retinoschisin 1 protein-coding chr2-12644 chr2 73750078 73750288 + 7.07 0.000 Intergenic Intergenic -12777 NM_001330391 51002 Hs.157401 NM_016058 ENSG00000144034 TPRKB CGI-121|CGI121|GAMOS5 TP53RK binding protein protein-coding chr8-1835 chr8 140448035 140448245 + 7.07 0.000 intron (NM_001160372, intron 2 of 22) AluSz|SINE|Alu 9604 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr6-7730 chr6 90342430 90342640 + 7.07 0.000 Intergenic AluSx|SINE|Alu 29793 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr18-2928 chr18 13303130 13303340 + 7.07 0.000 intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 25130 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr8-6264 chr8 41593340 41593550 + 7.07 0.000 intron (NM_001363197, intron 1 of 12) HERVE_a-int|LTR|ERV1 14929 NM_001363197 137964 Hs.355753 NM_178819 ENSG00000158669 GPAT4 1-AGPAT 6|AGPAT6|LPAAT-zeta|LPAATZ|TSARG7 glycerol-3-phosphate acyltransferase 4 protein-coding chr18-2259 chr18 73235603 73235813 + 7.07 0.000 intron (NR_034133, intron 2 of 5) intron (NR_034133, intron 2 of 5) 28790 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA chr5-8038 chr5 91071178 91071388 + 7.07 0.000 intron (NR_003149, intron 85 of 89) intron (NR_003149, intron 85 of 89) 243119 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr17-8608 chr17 80915017 80915227 + 7.07 0.000 intron (NM_020761, intron 21 of 33) MER52A|LTR|ERV1 56091 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr1-6454 chr1 18693533 18693743 + 7.07 0.000 intron (NM_001135254, intron 5 of 8) intron (NM_001135254, intron 5 of 8) 62792 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr2-11725 chr2 10465815 10466025 + 7.07 0.000 Intergenic Intergenic 16192 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr2-11436 chr2 224271885 224272095 + 7.07 0.000 Intergenic Intergenic 130004 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr12-7178 chr12 49284069 49284279 + 7.07 0.000 Intergenic Intergenic -10973 NM_006262 5630 Hs.37044 NM_006262 ENSG00000135406 PRPH NEF4|PRPH1 peripherin protein-coding chr2-10319 chr2 148920570 148920780 + 7.07 0.000 intron (NM_004522, intron 1 of 25) intron (NM_004522, intron 1 of 25) -27200 NR_111932 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr12-7940 chr12 109191854 109192064 + 7.07 0.000 intron (NM_001093, intron 15 of 52) intron (NM_001093, intron 15 of 52) 75372 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr3-10186 chr3 119205103 119205313 + 7.07 0.000 TTS (NM_006952) TTS (NM_006952) -21278 NR_046574 100874201 Hs.721307 NR_046574 ENSG00000240254 B4GALT4-AS1 - B4GALT4 antisense RNA 1 ncRNA chr5-5719 chr5 168332420 168332630 + 7.07 0.000 intron (NM_001161661, intron 1 of 22) intron (NM_001161661, intron 1 of 22) 40880 NM_001161661 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr7-5289 chr7 23549619 23549829 + 7.07 0.000 Intergenic AluJo|SINE|Alu -17683 NM_001282758 29896 Hs.445652 NM_013293 ENSG00000164548 TRA2A AWMS1|HSU53209 transformer 2 alpha homolog protein-coding chr4-8558 chr4 165972893 165973103 + 7.07 0.000 intron (NM_001204760, intron 1 of 9) ERV3-16A3_I-int|LTR|ERVL 99761 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr4-6728 chr4 4391510 4391720 + 7.07 0.000 intron (NM_014392, intron 3 of 4) intron (NM_014392, intron 3 of 4) 4652 NM_014392 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr4-8106 chr4 125566407 125566617 + 7.07 0.000 Intergenic HERVH-int|LTR|ERV1 59253 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr1-15660 chr1 164991944 164992154 + 7.07 0.000 Intergenic Intergenic -217408 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr8-6172 chr8 32674758 32674968 + 7.07 0.000 intron (NM_001322205, intron 1 of 8) MIR1_Amn|SINE|MIR 27774 NM_001322207 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chrX-3201 chrX 46381740 46381950 + 7.07 0.000 Intergenic Intergenic -54171 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr6-6083 chr6 145004403 145004613 + 7.07 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 598853 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr8-6581 chr8 70731003 70731213 + 7.07 0.000 intron (NM_001287259, intron 5 of 5) HUERS-P1-int|LTR|ERV1 61769 NM_001287259 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr3-10906 chr3 171602769 171602979 + 7.07 0.000 3' UTR (NM_001130081, exon 26 of 26) 3' UTR (NM_001130081, exon 26 of 26) -142466 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr17-5088 chr17 4487715 4487925 + 7.07 0.000 exon (NM_182538, exon 12 of 12) exon (NM_182538, exon 12 of 12) -11061 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr18-1382 chr18 48304632 48304842 + 7.07 0.000 intron (NM_001371290, intron 5 of 9) AluSx|SINE|Alu 52436 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr10-8986 chr10 120229417 120229627 + 7.07 0.000 Intergenic Intergenic 125701 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr7-5956 chr7 100591559 100591769 + 7.07 0.000 intron (NM_012172, intron 3 of 9) intron (NM_012172, intron 3 of 9) 2051 NM_012172 26261 Hs.283764 NM_012172 ENSG00000106336 FBXO24 FBX24 F-box protein 24 protein-coding chr18-1484 chr18 63465254 63465464 + 7.07 0.000 Intergenic Intergenic -11599 NM_002639 5268 Hs.55279 NM_002639 ENSG00000206075 SERPINB5 PI5|maspin serpin family B member 5 protein-coding chr21-1331 chr21 21755288 21755498 + 7.07 0.000 intron (NR_109958, intron 2 of 4) MLT1D|LTR|ERVL-MaLR 8408 NR_109958 101927821 Hs.334181 NR_109958 ENSG00000233997 LINC01425 - long intergenic non-protein coding RNA 1425 ncRNA chr6-5837 chr6 34134248 34134458 + 7.07 0.000 intron (NM_000841, intron 1 of 10) intron (NM_000841, intron 1 of 10) 11734 NM_001282847 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr1-6610 chr1 39993130 39993340 + 7.07 0.000 Intergenic Intergenic 38090 NM_001349821 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding chr7-3332 chr7 73932235 73932445 + 7.07 0.000 Intergenic AluSc|SINE|Alu 71181 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr10-5172 chr10 58547147 58547357 + 7.07 0.000 intron (NM_001080512, intron 1 of 20) L1MC3|LINE|L1 34380 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr10-8342 chr10 79472479 79472689 + 7.07 0.000 Intergenic AluSg|SINE|Alu -26960 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr4-5017 chr4 139530989 139531199 + 7.07 0.000 intron (NM_001306199, intron 3 of 7) intron (NM_001306199, intron 3 of 7) 25675 NR_131339 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr10-8660 chr10 100359528 100359738 + 7.07 0.000 intron (NM_005063, intron 5 of 5) intron (NM_005063, intron 5 of 5) 12400 NM_005063 6319 Hs.558396 NM_005063 ENSG00000099194 SCD FADS5|MSTP008|SCD1|SCDOS|hSCD1 stearoyl-CoA desaturase protein-coding chr15-5181 chr15 93091754 93091964 + 7.07 0.000 Intergenic Intergenic -2648 NM_020211 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr9-3786 chr9 126796511 126796721 + 7.07 0.000 Intergenic MLT1H-int|LTR|ERVL-MaLR -8390 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr12-7493 chr12 67145967 67146177 + 7.07 0.000 Intergenic AluSz|SINE|Alu -49788 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr10-8519 chr10 91614286 91614496 + 7.07 0.000 Intergenic Intergenic -2931 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr12-5839 chr12 41686425 41686635 + 7.07 0.000 Intergenic MER21B|LTR|ERVL -77659 NR_135041 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr20-3027 chr20 59198675 59198885 + 7.07 0.000 intron (NM_178457, intron 2 of 4) intron (NM_178457, intron 2 of 4) 7760 NM_178457 128611 Hs.473204 NM_178457 ENSG00000124203 ZNF831 C20orf174 zinc finger protein 831 protein-coding chr12-6451 chr12 91811692 91811902 + 7.07 0.000 Intergenic Intergenic 329916 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr19-4167 chr19 39332168 39332378 + 7.07 0.000 intron (NM_004877, intron 4 of 6) AluSx1|SINE|Alu 3770 NM_004877 9535 Hs.5210 NM_004877 ENSG00000130755 GMFG GMF-GAMMA glia maturation factor gamma protein-coding chr7-6177 chr7 128627129 128627339 + 7.07 0.000 Intergenic U6|snRNA|snRNA -14007 NR_024368 402483 Hs.722350 NM_001039682 LINC01000 - long intergenic non-protein coding RNA 1000 ncRNA chr11-7397 chr11 85169421 85169631 + 7.07 0.000 intron (NM_001142699, intron 4 of 27) LTR48B|LTR|ERV1 -246105 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr17-6519 chr17 31517668 31517878 + 7.07 0.000 exon (NM_001346747, exon 2 of 12) exon (NM_001346747, exon 2 of 12) -17110 NR_039877 100616248 NR_039877 ENSG00000284424 MIR4724 mir-4724 microRNA 4724 ncRNA chr5-6270 chr5 101674751 101674961 + 7.07 0.000 Intergenic Intergenic 621428 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr7-2235 chr7 131558088 131558298 + 7.07 0.000 Intergenic CpG -1565 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr3-11231 chr3 195596375 195596585 + 7.07 0.000 Intergenic Intergenic -12540 NM_001647 347 Hs.522555 NM_001647 ENSG00000189058 APOD - apolipoprotein D protein-coding chr9-6854 chr9 75612846 75613056 + 7.07 0.000 Intergenic Intergenic -277693 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr7-8487 chr7 50597111 50597321 + 7.07 0.000 intron (NM_001350816, intron 16 of 17) MER103C|DNA|hAT-Charlie -31811 NM_001082971 1644 Hs.359698 NM_000790 ENSG00000132437 DDC AADC dopa decarboxylase protein-coding chrX-2981 chrX 33402391 33402601 + 7.07 0.000 Intergenic Intergenic -63108 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr12-4978 chr12 77402812 77403022 + 7.07 0.000 Intergenic Intergenic -337348 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr6-4918 chr6 97547478 97547688 + 7.07 0.000 intron (NR_110757, intron 1 of 4) intron (NR_110757, intron 1 of 4) 241997 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr13-3480 chr13 18974094 18974304 + 7.07 0.000 Intergenic HAL1b|LINE|L1 -34060 NR_026852 348021 Hs.314114 NR_026852 ENSG00000232685 LINC00442 - long intergenic non-protein coding RNA 442 ncRNA chr12-3804 chr12 59452554 59452764 + 7.07 0.000 Intergenic Intergenic -143370 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr17-7957 chr17 47707074 47707284 + 7.07 0.000 intron (NM_014726, intron 6 of 8) intron (NM_014726, intron 6 of 8) 11915 NM_014726 9755 Hs.94790 NM_014726 ENSG00000198933 TBKBP1 ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding chr7-7282 chr7 36045268 36045478 + 7.07 0.000 Intergenic Intergenic -49937 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr9-8121 chr9 100066697 100066907 + 7.07 0.000 intron (NM_015051, intron 1 of 11) intron (NM_015051, intron 1 of 11) 32198 NM_015051 23071 Hs.154023 NM_015051 ENSG00000023318 ERP44 PDIA10|TXNDC4 endoplasmic reticulum protein 44 protein-coding chr1-8524 chr1 156441057 156441267 + 7.07 0.000 Intergenic MIRb|SINE|MIR -11614 NR_135262 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr14-2211 chr14 102568479 102568689 + 7.07 0.000 Intergenic MER21A|LTR|ERVL 23330 NR_146561 105370681 NR_146561 ENSG00000259230 LINC02323 - long intergenic non-protein coding RNA 2323 ncRNA chr12-6762 chr12 7358480 7358690 + 7.07 0.000 intron (NM_001297650, intron 18 of 19) L1MCa|LINE|L1 54253 NM_001080454 341392 Hs.450804 NM_001080454 ENSG00000215009 ACSM4 - acyl-CoA synthetase medium chain family member 4 protein-coding chr2-8500 chr2 127876705 127876915 + 7.07 0.000 intron (NM_001199140, intron 2 of 7) AluSp|SINE|Alu 8050 NM_031445 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr21-1028 chr21 21736807 21737017 + 7.07 0.000 intron (NR_038872, intron 1 of 2) MLT1B|LTR|ERVL-MaLR 407 NR_038872 378828 Hs.551009 NR_038872 ENSG00000238265 LINC00317 C21orf117|NCRNA00317|PRED89 long intergenic non-protein coding RNA 317 ncRNA chr6-3365 chr6 36336665 36336875 + 7.07 0.000 5' UTR (NM_001010903, exon 1 of 12) 5' UTR (NM_001010903, exon 1 of 12) 118 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chr20-4089 chr20 39613578 39613788 + 7.07 0.000 Intergenic L3|LINE|CR1 -388935 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr22-3605 chr22 20287949 20288159 + 7.07 0.000 Intergenic Intergenic -19736 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chr1-14150 chr1 32281476 32281686 + 7.07 0.000 intron (NM_001042771, intron 12 of 12) intron (NM_001042771, intron 12 of 12) 7470 NM_001042771 3932 Hs.470627 NM_005356 ENSG00000182866 LCK IMD22|LSK|YT16|p56lck|pp58lck LCK proto-oncogene, Src family tyrosine kinase protein-coding chr9-8956 chr9 137827850 137828060 + 7.07 0.000 intron (NM_001354263, intron 25 of 26) intron (NM_001354263, intron 25 of 26) -10464 NR_030333 693187 NR_030333 ENSG00000207693 MIR602 MIRN602|hsa-mir-602 microRNA 602 ncRNA chr5-7041 chr5 168055552 168055762 + 7.07 0.000 intron (NM_001368145, intron 5 of 26) Helitron3Na_Mam|RC|Helitron -110188 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr16-4629 chr16 72151190 72151400 + 7.07 0.000 intron (NM_031293, intron 4 of 20) intron (NM_031293, intron 4 of 20) 20860 NM_031293 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr10-8992 chr10 120808400 120808610 + 7.07 0.000 intron (NR_033850, intron 1 of 2) MER20|DNA|hAT-Charlie 42674 NR_033850 283089 Hs.568750 NR_033850 ENSG00000227165 WDR11-AS1 - WDR11 antisense RNA 1 ncRNA chr14-5248 chr14 99542738 99542948 + 7.07 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 61364 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr7-9446 chr7 134413693 134413903 + 7.07 0.000 Intergenic L2a|LINE|L2 45302 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr13-3969 chr13 62973965 62974175 + 7.07 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -166711 NR_120403 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr6-5686 chr6 110889882 110890092 + 7.07 0.000 intron (NM_001287214, intron 2 of 7) intron (NM_001287214, intron 2 of 7) 15203 NM_001287216 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr22-1814 chr22 35364309 35364519 + 7.07 0.000 Intergenic Intergenic -16682 NM_002133 3162 Hs.517581 NM_002133 ENSG00000100292 HMOX1 HMOX1D|HO-1|HSP32|bK286B10 heme oxygenase 1 protein-coding chr8-6247 chr8 40443305 40443515 + 7.07 0.000 Intergenic Intergenic -100047 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr3-9738 chr3 68141746 68141956 + 7.07 0.000 intron (NM_001252216, intron 2 of 4) MLT1K|LTR|ERVL-MaLR 137604 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr18-2248 chr18 70072752 70072962 + 7.07 0.000 intron (NM_001318520, intron 33 of 47) intron (NM_001318520, intron 33 of 47) -116058 NM_006566 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr22-2108 chr22 29704483 29704693 + 7.07 0.000 Intergenic Intergenic -15415 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr19-6623 chr19 30652827 30653037 + 7.07 0.000 intron (NM_001352260, intron 5 of 5) intron (NM_001352260, intron 5 of 5) 280548 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr14-4187 chr14 86543719 86543929 + 7.07 0.000 Intergenic Intergenic -361954 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chrX-4893 chrX 107327171 107327381 + 7.07 0.000 Intergenic Intergenic 120644 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr13-4028 chr13 72930050 72930260 + 7.07 0.000 intron (NR_146206, intron 13 of 16) AluJr|SINE|Alu -124821 NM_001286818 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr1-16080 chr1 202836950 202837160 + 7.07 0.000 Intergenic MIRc|SINE|MIR 16798 NR_038135 641515 Hs.23459 NR_038135 ENSG00000184774 MGAT4EP - MGAT4 family member E, pseudogene pseudo chr12-7543 chr12 70831687 70831897 + 7.07 0.000 intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) -42872 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr9-3698 chr9 106306837 106307047 + 7.07 0.000 Intergenic Intergenic -293986 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr4-7792 chr4 97067377 97067587 + 7.07 0.000 Intergenic MIRc|SINE|MIR -299444 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr3-7605 chr3 14977847 14978057 + 7.07 0.000 intron (NM_003298, intron 1 of 14) AluSz6|SINE|Alu -29511 NR_046251 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr13-1488 chr13 110422587 110422797 + 7.07 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 40595 NM_001267044 100129836 Hs.640035 NM_001267044 COL4A2-AS2 - COL4A2 antisense 2 protein-coding chr6-4332 chr6 16974384 16974594 + 7.07 0.000 Intergenic Intergenic -127769 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr9-7760 chr9 76732796 76733006 + 7.07 0.000 intron (NM_001308048, intron 6 of 17) intron (NM_001308048, intron 6 of 17) -31535 NR_132312 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3|PRUNE2-AS1 prostate cancer associated 3 ncRNA chr2-5107 chr2 18915554 18915764 + 7.07 0.000 Intergenic L3|LINE|CR1 111312 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr2-11117 chr2 132626244 132626454 + 7.07 0.000 intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 43856 NM_001321235 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr2-9042 chr2 199137064 199137274 + 7.07 0.000 Intergenic HERV16-int|LTR|ERVL 320770 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr9-8705 chr9 131240842 131241052 + 7.07 0.000 Intergenic AluSx1|SINE|Alu 35563 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr17-5027 chr17 1502823 1503033 + 7.07 0.000 intron (NM_001135642, intron 9 of 13) AluJb|SINE|Alu -10242 NM_001080779 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr16-5003 chr16 27151683 27151893 + 7.07 0.000 Intergenic Intergenic -51738 NM_024773 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr4-4419 chr4 47872452 47872662 + 7.07 0.000 intron (NR_103795, intron 19 of 23) Tigger1|DNA|TcMar-Tigger -34451 NM_001278585 10699 Hs.518618 NM_006587 ENSG00000145244 CORIN ATC2|CRN|Lrp4|PEE5|TMPRSS10 corin, serine peptidase protein-coding chr4-6427 chr4 132269136 132269346 + 7.07 0.000 Intergenic Intergenic -321848 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr5-8533 chr5 134824755 134824965 + 7.07 0.000 intron (NM_001300860, intron 21 of 22) intron (NM_001300860, intron 21 of 22) -20820 NM_152409 134553 Hs.708536 NM_152409 ENSG00000181904 C5orf24 - chromosome 5 open reading frame 24 protein-coding chr2-6369 chr2 107724371 107724581 + 7.07 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -29636 NR_126370 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chrX-4058 chrX 19164694 19164904 + 7.07 0.000 Intergenic Intergenic -42162 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr15-4087 chr15 73132944 73133154 + 7.07 0.000 intron (NM_002499, intron 4 of 28) L1PB1|LINE|L1 80565 NM_001172624 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr3-5275 chr3 117661247 117661457 + 7.07 0.000 Intergenic Intergenic 29573 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr1-14212 chr1 34973572 34973782 + 7.07 0.000 Intergenic Intergenic 5029 NR_037869 653160 Hs.533986 NR_037869 ENSG00000241014 LOC653160 - uncharacterized LOC653160 ncRNA chr1-4891 chr1 36097777 36097987 + 7.07 0.000 exon (NM_001294347, exon 4 of 4) exon (NM_001294347, exon 4 of 4) 8990 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr1-9565 chr1 42144697 42144907 + 7.07 0.000 Intergenic Intergenic -8608 NM_007102 2981 Hs.32966 NM_007102 ENSG00000044012 GUCA2B GCAP-II|UGN guanylate cyclase activator 2B protein-coding chr10-7998 chr10 60785524 60785734 + 7.07 0.000 intron (NM_033379, intron 3 of 6) intron (NM_033379, intron 3 of 6) 7151 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chrX-4995 chrX 117956913 117957123 + 7.07 0.000 intron (NM_001168303, intron 1 of 6) intron (NM_001168303, intron 1 of 6) 16720 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr14-5146 chr14 90845324 90845534 + 7.07 0.000 Intergenic L1MB8|LINE|L1 -28999 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr12-7820 chr12 99638236 99638446 + 7.07 0.000 intron (NM_152788, intron 9 of 25) THE1C-int|LTR|ERVL-MaLR -9412 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr2-6401 chr2 128395881 128396091 + 7.07 0.000 Intergenic Intergenic -77118 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr2-7762 chr2 39429852 39430062 + 7.07 0.000 intron (NM_003618, intron 1 of 33) L1ME2|LINE|L1 7328 NM_001270425 8491 Hs.655750 NM_003618 ENSG00000011566 MAP4K3 GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding chr18-3209 chr18 46506304 46506514 + 7.07 0.000 intron (NM_001145472, intron 18 of 23) intron (NM_001145472, intron 18 of 23) 12677 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr17-8275 chr17 67622324 67622534 + 7.07 0.000 intron (NM_181671, intron 5 of 9) intron (NM_181671, intron 5 of 9) -95404 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr3-6599 chr3 125766482 125766692 + 7.07 0.000 Intergenic CpG -8127 NR_153417 105374312 Hs.637431 NR_153417 ENSG00000272840 LOC105374312 - uncharacterized LOC105374312 ncRNA chr19-6321 chr19 10280048 10280258 + 7.07 0.000 intron (NM_000201, intron 2 of 6) intron (NM_000201, intron 2 of 6) -6802 NM_001039132 3386 Hs.706750 NM_001544 ENSG00000105371 ICAM4 CD242|LW intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) protein-coding chr7-8809 chr7 83178330 83178540 + 7.07 0.000 Intergenic L2a|LINE|L2 -15551 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr2-8477 chr2 126099733 126099943 + 7.07 0.000 Intergenic Intergenic 18147 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chrX-5068 chrX 124498637 124498847 + 7.07 0.000 intron (NM_014253, intron 19 of 30) L2c|LINE|L2 152460 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr11-7463 chr11 127996952 127997162 + 7.07 0.000 Intergenic Intergenic -211709 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr14-4629 chr14 53576419 53576629 + 7.07 0.000 Intergenic Intergenic 371960 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr10-8501 chr10 90218201 90218411 + 7.07 0.000 Intergenic Intergenic -260933 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr4-3335 chr4 2179763 2179973 + 7.07 0.000 intron (NM_181808, intron 7 of 25) intron (NM_181808, intron 7 of 25) 62253 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr14-5072 chr14 84261685 84261895 + 7.07 0.000 Intergenic Intergenic -1010142 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr5-7559 chr5 39359437 39359647 + 7.07 0.000 intron (NM_001737, intron 1 of 10) L2a|LINE|L2 4953 NM_001737 735 Hs.654443 NM_001737 ENSG00000113600 C9 ARMD15|C9D complement C9 protein-coding chr20-2944 chr20 14879474 14879684 + 7.07 0.000 intron (NM_001351663, intron 5 of 17) intron (NM_001351663, intron 5 of 17) 49939 NR_072988 100379174 Hs.407533 NR_037841 ENSG00000235914 MACROD2-AS1 BA318C17.1|NCRNA00186 MACROD2 antisense RNA 1 ncRNA chr2-11600 chr2 2416259 2416469 + 7.07 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger -85089 NM_001329851 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr5-3117 chr5 53983810 53984020 + 7.07 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) -32316 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr12-7505 chr12 68041527 68041737 + 7.07 0.000 Intergenic L2a|LINE|L2 52187 NR_104125 100885789 Hs.439832 NR_104124 ENSG00000255733 IFNG-AS1 GS1-410F4.2|NEST|Tmevpg1 IFNG antisense RNA 1 ncRNA chr9-8383 chr9 118404602 118404812 + 7.07 0.000 Intergenic Intergenic -274964 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chrX-4328 chrX 45863155 45863365 + 7.07 0.000 Intergenic LTR16A2|LTR|ERVL -11770 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr2-13504 chr2 149899638 149899848 + 7.07 0.000 Intergenic HERV16-int|LTR|ERVL -40552 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr4-8531 chr4 163571372 163571582 + 7.07 0.000 intron (NM_017923, intron 2 of 3) intron (NM_017923, intron 2 of 3) 42057 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr1-12803 chr1 84692648 84692858 + 7.07 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -2285 NM_001166295 117178 Hs.22587 NM_014021 ENSG00000117155 SSX2IP ADIP|hMsd1 SSX family member 2 interacting protein protein-coding chr1-16639 chr1 240013963 240014173 + 7.07 0.000 TTS (NR_036695) TTS (NR_036695) 6544 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chr14-3581 chr14 19169847 19170057 + 7.07 0.000 Intergenic Intergenic 43422 NR_160525 114004396 Hs.650463 NR_160525 LNCRNA-ATB - long noncoding RNA activated by TGF-beta ncRNA chr2-8664 chr2 149069005 149069215 + 7.07 0.000 intron (NM_001317006, intron 1 of 4) intron (NM_001317006, intron 1 of 4) -8412 NM_001317004 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr12-3071 chr12 8396644 8396854 + 7.07 0.000 Intergenic CpG -5997 NR_024420 389634 Hs.434403 NM_001012988 ENSG00000226091 LINC00937 - long intergenic non-protein coding RNA 937 ncRNA chr3-6282 chr3 72092701 72092911 + 7.07 0.000 intron (NR_104116, intron 2 of 6) intron (NR_104116, intron 2 of 6) 7649 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr20-4244 chr20 48594668 48594878 + 7.07 0.000 Intergenic Intergenic 233226 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr6-8157 chr6 131121845 131122055 + 7.07 0.000 Intergenic Intergenic -13517 NM_016377 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr5-8659 chr5 140278935 140279145 + 7.07 0.000 intron (NM_002622, intron 3 of 3) intron (NM_002622, intron 3 of 3) 24061 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr2-4122 chr2 158153313 158153523 + 7.07 0.000 Intergenic L1M1|LINE|L1 -13232 NR_038850 554201 Hs.570262 NR_038850 ENSG00000227480 CCDC148-AS1 - CCDC148 antisense RNA 1 ncRNA chrX-4638 chrX 78561342 78561552 + 7.07 0.000 Intergenic L1PA10|LINE|L1 97881 NM_152694 203430 Hs.134873 NM_152694 ENSG00000179300 RTL3 Mar3|Mart3|SIRH9|ZCCHC5|ZHC5 retrotransposon Gag like 3 protein-coding chr10-5233 chr10 64374264 64374474 + 7.07 0.000 Intergenic Intergenic -451159 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr12-7816 chr12 99371503 99371713 + 7.07 0.000 intron (NM_152788, intron 12 of 25) intron (NM_152788, intron 12 of 25) -216518 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr3-6781 chr3 142934788 142934998 + 7.07 0.000 intron (NR_038455, intron 2 of 4) L1MEh|LINE|L1 8218 NR_038455 100507389 Hs.38715 NR_038455 ENSG00000243818 LOC100507389 - uncharacterized LOC100507389 ncRNA chr1-5634 chr1 22120282 22120492 + 7.07 0.000 exon (NM_030761, exon 5 of 5) exon (NM_030761, exon 5 of 5) 22710 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr14-5244 chr14 99418608 99418818 + 7.07 0.000 intron (NM_199123, intron 6 of 8) intron (NM_199123, intron 6 of 8) 62146 NM_032233 84193 Hs.510407 NM_032233 ENSG00000183576 SETD3 C14orf154|hSETD3 SET domain containing 3, actin histidine methyltransferase protein-coding chr10-8473 chr10 88591635 88591845 + 7.07 0.000 intron (NM_001010939, intron 4 of 10) intron (NM_001010939, intron 4 of 10) 4978 NM_001010939 142910 Hs.440959 NM_001010939 ENSG00000204022 LIPJ LIPL1|bA425M17.2 lipase family member J protein-coding chr7-6246 chr7 134418452 134418662 + 7.07 0.000 Intergenic Intergenic 40543 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr10-5612 chr10 94194407 94194617 + 7.07 0.000 intron (NM_001165979, intron 3 of 31) intron (NM_001165979, intron 3 of 31) -85718 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr5-6490 chr5 178274801 178275011 + 7.07 0.000 intron (NM_173465, intron 5 of 28) intron (NM_173465, intron 5 of 28) -42084 NM_001278346 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr12-2143 chr12 107104691 107104901 + 7.07 0.000 Intergenic Intergenic -11247 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr11-6239 chr11 48173425 48173635 + 7.07 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -43280 NM_001005470 119765 Hs.553566 NM_001005470 ENSG00000175619 OR4B1 OR11-106|OST208 olfactory receptor family 4 subfamily B member 1 protein-coding chr14-2958 chr14 49843539 49843749 + 7.07 0.000 intron (NM_001301732, intron 4 of 31) Tigger3c|DNA|TcMar-Tigger 9144 NM_004713 9147 Hs.655964 NM_004713 ENSG00000165525 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding chr7-9148 chr7 111580886 111581096 + 7.07 0.000 Intergenic LTR12C|LTR|ERV1 -18474 NM_001244606 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr14-5303 chr14 101187559 101187769 + 7.07 0.000 Intergenic Intergenic 66808 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr12-8092 chr12 118064582 118064792 + 7.07 0.000 3' UTR (NM_019086, exon 9 of 9) 3' UTR (NM_019086, exon 9 of 9) -2513 NM_001278557 55884 Hs.506985 NM_018639 ENSG00000176871 WSB2 SBA2 WD repeat and SOCS box containing 2 protein-coding chr8-6934 chr8 103800157 103800367 + 7.07 0.000 intron (NM_001348497, intron 3 of 22) L1MD|LINE|L1 -18958 NM_001348501 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr10-7891 chr10 49627172 49627382 + 7.07 0.000 intron (NM_001142929, intron 6 of 14) L1ME3G|LINE|L1 13240 NM_001142929 1103 Hs.302002 NM_020549 ENSG00000070748 CHAT CHOACTASE|CMS1A|CMS1A2|CMS6 choline O-acetyltransferase protein-coding chr19-6323 chr19 10307534 10307744 + 7.07 0.000 intron (NM_001103167, intron 1 of 3) AluSx1|SINE|Alu 1918 NM_001103167 100125288 Hs.709296 NM_001103167 ENSG00000220201 ZGLP1 GATAD3|GLP-1|GLP1 zinc finger GATA like protein 1 protein-coding chr4-6787 chr4 7239246 7239456 + 7.07 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 46813 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chrX-5280 chrX 140474010 140474220 + 7.07 0.000 Intergenic MER41B|LTR|ERV1 30945 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr8-6764 chr8 91818382 91818592 + 7.07 0.000 Intergenic L1PA8|LINE|L1 199193 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr18-3079 chr18 32993651 32993861 + 7.07 0.000 intron (NM_001308126, intron 21 of 23) L2c|LINE|L2 -220733 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chrX-2989 chrX 41289148 41289358 + 7.07 0.000 Intergenic Intergenic 13514 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr7-3714 chr7 57771597 57771807 + 7.07 0.000 Intergenic SST1|Satellite|centr 321525 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr6-5435 chr6 157849051 157849261 + 7.07 0.000 intron (NM_016224, intron 1 of 17) intron (NM_016224, intron 1 of 17) 25910 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chrX-2292 chrX 52631780 52631990 + 7.07 0.000 intron (NR_027250, intron 6 of 7) Tigger1|DNA|TcMar-Tigger 8950 NR_027250 280659 Hs.694472 NM_174961 SSX8P SSX8 SSX family member 8, pseudogene pseudo chr1-16713 chr1 247173331 247173541 + 7.07 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -1419 NM_001297569 7678 Hs.421238 NM_003431 ENSG00000196418 ZNF124 HZF-16|HZF16|ZK7 zinc finger protein 124 protein-coding chr4-8174 chr4 130575460 130575670 + 7.07 0.000 Intergenic Intergenic 199204 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr11-10382 chr11 112795887 112796097 + 7.07 0.000 Intergenic Intergenic -165428 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr11-8506 chr11 122131976 122132186 + 7.07 0.000 intron (NR_137184, intron 1 of 1) intron (NR_137184, intron 1 of 1) 14512 NR_029477 406882 NR_029477 ENSG00000198975 MIRLET7A2 LET7A2|MIRNLET7A2|let-7a-2 microRNA let-7a-2 ncRNA chr1-9318 chr1 27160051 27160261 + 7.07 0.000 Intergenic MIR|SINE|MIR -5031 NR_046474 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr4-7664 chr4 86572147 86572357 + 7.07 0.000 Intergenic MER45B|DNA|hAT-Tip100 -22063 NM_080684 5783 Hs.436142 NM_006264 ENSG00000163629 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase non-receptor type 13 protein-coding chr4-4027 chr4 2102402 2102612 + 7.07 0.000 intron (NM_181808, intron 19 of 25) L1M2|LINE|L1 43180 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr17-5828 chr17 65447409 65447619 + 7.07 0.000 Intergenic L2b|LINE|L2 -10027 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr11-6458 chr11 66867673 66867883 + 7.07 0.000 intron (NM_022172, intron 8 of 20) intron (NM_022172, intron 8 of 20) 10714 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr15-3388 chr15 88188934 88189144 + 7.07 0.000 intron (NM_001007156, intron 3 of 15) intron (NM_001007156, intron 3 of 15) 16935 NM_001320135 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr5-1279 chr5 140175112 140175322 + 7.07 0.000 promoter-TSS (NM_032412) promoter-TSS (NM_032412) 29 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr6-4572 chr6 43114481 43114691 + 7.07 0.000 intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) 37772 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr1-7647 chr1 6763575 6763785 + 7.07 0.000 Intergenic AluJb|SINE|Alu 21300 NR_149049 110841581 NR_149049 CAMTA1-DT lncCAMTA1 CAMTA1 divergent transcript ncRNA chr21-1704 chr21 31058756 31058966 + 7.07 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -20385 NM_001099219 728299 Hs.580875 NM_001099219 ENSG00000206102 KRTAP19-8 - keratin associated protein 19-8 protein-coding chr1-16339 chr1 218297121 218297331 + 7.07 0.000 intron (NM_016052, intron 1 of 4) MIR|SINE|MIR 11933 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr19-3552 chr19 45599485 45599695 + 7.07 0.000 intron (NM_005282, intron 1 of 1) intron (NM_005282, intron 1 of 1) 2622 NM_005282 2828 Hs.17170 NM_005282 ENSG00000177464 GPR4 - G protein-coupled receptor 4 protein-coding chrX-3556 chrX 68515717 68515927 + 7.07 0.000 intron (NM_001195214, intron 2 of 5) AluJr|SINE|Alu 16771 NM_173834 286451 Hs.82719 NM_173834 ENSG00000181704 YIPF6 FinGER6 Yip1 domain family member 6 protein-coding chr3-5006 chr3 23739648 23739858 + 7.07 0.000 Intergenic Intergenic -66202 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr1-14980 chr1 89834571 89834781 + 7.07 0.000 intron (NM_018103, intron 1 of 2) L2c|LINE|L2 12737 NM_018103 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 VRAC subunit D protein-coding chr10-4980 chr10 30646471 30646681 + 7.07 0.000 Intergenic LTR32|LTR|ERVL -16823 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr11-10298 chr11 106621047 106621257 + 7.07 0.000 Intergenic MIRb|SINE|MIR 369745 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr2-13744 chr2 168997649 168997859 + 7.07 0.000 intron (NM_003742, intron 5 of 27) intron (NM_003742, intron 5 of 27) 33570 NM_003742 8647 Hs.158316 NM_003742 ENSG00000073734 ABCB11 ABC16|BRIC2|BSEP|PFIC-2|PFIC2|PGY4|SPGP ATP binding cassette subfamily B member 11 protein-coding chr8-3108 chr8 40205267 40205477 + 7.07 0.000 Intergenic LTR72B|LTR|ERV1 51890 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr16-3498 chr16 9251003 9251213 + 7.07 0.000 Intergenic Intergenic -104480 NR_135195 101927009 Hs.537273 NR_135195 ENSG00000261617 LINC02177 - long intergenic non-protein coding RNA 2177 ncRNA chr3-11019 chr3 181390566 181390776 + 7.07 0.000 intron (NR_075091, intron 3 of 7) L1PA10|LINE|L1 51815 NR_125407 102724604 Hs.570524 NR_125407 ENSG00000241231 LOC102724604 - uncharacterized LOC102724604 ncRNA chr2-11462 chr2 230016916 230017126 + 7.07 0.000 Intergenic AluJr4|SINE|Alu 51903 NM_152527 151473 Hs.504317 NM_152527 ENSG00000163053 SLC16A14 MCT14 solute carrier family 16 member 14 protein-coding chr7-8045 chr7 21655605 21655815 + 7.07 0.000 intron (NM_001277115, intron 28 of 81) intron (NM_001277115, intron 28 of 81) 112671 NM_001277115 8701 Hs.520245 NM_001277115 ENSG00000105877 DNAH11 CILD7|DNAHBL|DNAHC11|DNHBL|DPL11 dynein axonemal heavy chain 11 protein-coding chr2-8390 chr2 112941707 112941917 + 7.07 0.000 Intergenic AluSx|SINE|Alu 26619 NM_173205 27178 Hs.166371 NM_014439 ENSG00000125571 IL37 FIL1|FIL1(ZETA)|FIL1Z|IL-1F7|IL-1H|IL-1H4|IL-1RP1|IL-37|IL1F7|IL1H4|IL1RP1 interleukin 37 protein-coding chr13-3739 chr13 41414155 41414365 + 7.07 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -28304 NR_002163 100506759 Hs.507861 NR_002163 OR7E37P OR7E48P|OST193|hg533 olfactory receptor family 7 subfamily E member 37 pseudogene pseudo chr15-3580 chr15 46126650 46126860 + 7.07 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 421560 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr5-8115 chr5 98205906 98206116 + 7.07 0.000 Intergenic Intergenic -44772 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr11-4093 chr11 32351481 32351691 + 7.07 0.000 Intergenic Intergenic 48814 NM_001367854 7490 Hs.591980 NM_000378 ENSG00000184937 WT1 AWT1|GUD|NPHS4|WAGR|WIT-2|WT33 WT1 transcription factor protein-coding chr4-5662 chr4 13918203 13918413 + 7.07 0.000 intron (NR_121681, intron 3 of 3) MLT1H|LTR|ERVL-MaLR -193660 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr2-12495 chr2 62814219 62814429 + 7.07 0.000 intron (NM_001142615, intron 5 of 22) MSTD|LTR|ERVL-MaLR 107427 NM_001354217 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr5-5238 chr5 118029430 118029640 + 7.07 0.000 intron (NR_104997, intron 2 of 2) intron (NR_104997, intron 2 of 2) -253039 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr1-15443 chr1 153930077 153930287 + 7.07 0.000 3' UTR (NM_001367466, exon 28 of 28) 3' UTR (NM_001367466, exon 28 of 28) -7210 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr3-3245 chr3 46725915 46726125 + 7.07 0.000 intron (NR_147121, intron 3 of 3) intron (NR_147121, intron 3 of 3) -8151 NM_013270 29122 Hs.120365 NM_013270 ENSG00000283706 PRSS50 CT20|TSP50 serine protease 50 protein-coding chr10-7231 chr10 121787193 121787403 + 7.07 0.000 intron (NM_001001976, intron 11 of 11) intron (NM_001001976, intron 11 of 11) 140733 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr3-7581 chr3 8362045 8362255 + 7.07 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 139508 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr9-8218 chr9 109338596 109338806 + 7.07 0.000 Intergenic Intergenic -17737 NM_019114 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr7-9260 chr7 123783760 123783970 + 7.07 0.000 Intergenic Intergenic 6846 NR_104080 101954271 NR_104080 ENSG00000207507 RNU6-9 U6-9 RNA, U6 small nuclear 9 snRNA chr6-6047 chr6 129427141 129427351 + 7.07 0.000 intron (NM_000426, intron 40 of 64) intron (NM_000426, intron 40 of 64) 282931 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr4-8465 chr4 156828045 156828255 + 7.07 0.000 intron (NM_016205, intron 2 of 5) intron (NM_016205, intron 2 of 5) 143649 NM_016205 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr14-2462 chr14 83295175 83295385 + 7.07 0.000 Intergenic Intergenic 652648 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr10-8929 chr10 116389067 116389277 + 7.07 0.000 Intergenic Intergenic -38675 NM_001011709 119548 Hs.276724 NM_001011709 ENSG00000203837 PNLIPRP3 - pancreatic lipase related protein 3 protein-coding chr1-9893 chr1 69364637 69364847 + 7.07 0.000 Intergenic MER103C|DNA|hAT-Charlie -68513 NR_147164 105378788 Hs.164441 NR_147164 ENSG00000229639 LINC01758 - long intergenic non-protein coding RNA 1758 ncRNA chr11-2284 chr11 9091621 9091831 + 7.07 0.000 promoter-TSS (NM_001330199) promoter-TSS (NM_001330199) -127 NM_001367977 57758 Hs.523468 NM_020974 ENSG00000175356 SCUBE2 CEGB1|CEGF1|CEGP1|scube/You signal peptide, CUB domain and EGF like domain containing 2 protein-coding chr7-9093 chr7 105831929 105832139 + 7.07 0.000 intron (NM_152749, intron 2 of 3) HAL1|LINE|L1 44551 NM_152749 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chrX-5053 chrX 123702650 123702860 + 7.07 0.000 intron (NM_001081550, intron 4 of 38) AluJb|SINE|Alu 30297 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr3-9243 chr3 38661801 38662011 + 7.07 0.000 Intergenic L1MA4|LINE|L1 -12219 NM_001354701 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr16-5153 chr16 2332731 2332941 + 7.07 0.000 intron (NM_001089, intron 1 of 32) AluJr|SINE|Alu 7892 NM_001089 21 Hs.26630 NM_001089 ENSG00000167972 ABCA3 ABC-C|ABC3|EST111653|LBM180|SMDP3 ATP binding cassette subfamily A member 3 protein-coding chr5-5493 chr5 141495792 141496002 + 7.07 0.000 intron (NM_018923, intron 2 of 3) (GTCTCT)n|Simple_repeat|Simple_repeat 6656 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr20-3790 chr20 22390322 22390532 + 7.07 0.000 Intergenic Intergenic 30216 NR_027089 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr6-5290 chr6 140623659 140623869 + 7.07 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -60050 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr4-3733 chr4 77452718 77452928 + 7.07 0.000 Intergenic Intergenic -58930 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chrX-3288 chrX 104303727 104303937 + 7.07 0.000 Intergenic Intergenic -48899 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr1-13260 chr1 224831495 224831705 + 7.07 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -98054 NM_144989 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr8-3324 chr8 32240926 32241136 + 7.07 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -199715 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chrX-4296 chrX 43318091 43318301 + 7.07 0.000 Intergenic Intergenic 141202 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr5-4222 chr5 126865222 126865432 + 7.07 0.000 Intergenic Intergenic 88191 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr18-1826 chr18 21685488 21685698 + 7.07 0.000 intron (NM_138340, intron 3 of 8) AluJb|SINE|Alu 2075 NR_031565 100302135 NR_031565 ENSG00000221493 MIR320C1 MIR320C-1|MIRN320C1|hsa-mir-320c-1|mir-320c-1 microRNA 320c-1 ncRNA chr6-4978 chr6 107130010 107130220 + 7.07 0.000 Intergenic Intergenic -14600 NM_001367314 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chrX-4560 chrX 69593923 69594133 + 7.07 0.000 Intergenic AluSx4|SINE|Alu -22085 NM_001005609 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr7-9051 chr7 103381947 103382157 + 7.07 0.000 intron (NR_135801, intron 12 of 17) intron (NR_135801, intron 12 of 17) 34409 NM_002803 5701 Hs.437366 NM_002803 ENSG00000161057 PSMC2 MSS1|Nbla10058|S7 proteasome 26S subunit, ATPase 2 protein-coding chr4-5642 chr4 7979970 7980180 + 7.07 0.000 intron (NM_001130084, intron 19 of 19) MLT1K|LTR|ERVL-MaLR 25306 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chrX-2824 chrX 136146928 136147138 + 7.07 0.000 promoter-TSS (NM_001159703) promoter-TSS (NM_001159703) 331 NR_027621 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr5-2146 chr5 90473891 90474101 + 7.07 0.000 promoter-TSS (NM_006467) promoter-TSS (NM_006467) 67 NM_001370354 10622 Hs.282387 NM_006467 ENSG00000113356 POLR3G RPC32|RPC7 RNA polymerase III subunit G protein-coding chr3-5200 chr3 73500388 73500598 + 7.07 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) -20829 NR_121660 101927296 Hs.662049 NR_121660 LOC101927296 - uncharacterized LOC101927296 ncRNA chr17-7337 chr17 5929994 5930204 + 7.07 0.000 non-coding (NR_040000, exon 4 of 4) non-coding (NR_040000, exon 4 of 4) -140515 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr2-12094 chr2 33646042 33646252 + 7.07 0.000 Intergenic L1M4b|LINE|L1 -46785 NM_001304538 25940 Hs.468140 NM_015475 ENSG00000119812 FAM98A - family with sequence similarity 98 member A protein-coding chr16-6882 chr16 84293550 84293760 + 7.07 0.000 Intergenic MIR|SINE|MIR -1223 NM_021197 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr5-7970 chr5 82467302 82467512 + 7.07 0.000 Intergenic Intergenic 187945 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr12-3405 chr12 105418852 105419062 + 7.07 0.000 Intergenic Intergenic 88266 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr12-7069 chr12 41857178 41857388 + 7.07 0.000 Intergenic AluSg|SINE|Alu 93094 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr2-8300 chr2 105138091 105138301 + 7.07 0.000 Intergenic Intergenic -5917 NR_136172 105373984 Hs.570237 NR_136172 ENSG00000226508 LINC01918 - long intergenic non-protein coding RNA 1918 ncRNA chr9-6207 chr9 98502144 98502354 + 7.07 0.000 intron (NM_005458, intron 3 of 18) intron (NM_005458, intron 3 of 18) 206686 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr11-10672 chr11 128054499 128054709 + 7.07 0.000 Intergenic Intergenic -154162 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr18-2558 chr18 3961120 3961330 + 7.07 0.000 intron (NM_001242761, intron 3 of 11) intron (NM_001242761, intron 3 of 11) -1128 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA chr3-9286 chr3 42328002 42328212 + 7.07 0.000 Intergenic Intergenic -61922 NM_000729 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr6-5802 chr6 12223165 12223375 + 7.07 0.000 Intergenic Intergenic -67091 NM_001168319 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr9-7403 chr9 20312633 20312843 + 7.07 0.000 Intergenic Intergenic 98500 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr1-9434 chr1 33679374 33679584 + 7.07 0.000 intron (NM_052896, intron 25 of 69) AluSc|SINE|Alu -180996 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding chr10-4345 chr10 30143144 30143354 + 7.07 0.000 Intergenic Intergenic -27755 NM_001350021 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr3-8377 chr3 89783596 89783806 + 7.07 0.000 Intergenic Intergenic 676080 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr18-2776 chr18 1606328 1606538 + 7.07 0.000 Intergenic LTR37-int|LTR|ERV1 -246804 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr21-1344 chr21 32356631 32356841 + 7.07 0.000 intron (NM_014825, intron 15 of 38) intron (NM_014825, intron 15 of 38) 20586 NR_002996 677846 Hs.712293 NR_002996 ENSG00000200792 SNORA80A ACA67|SNORA80 small nucleolar RNA, H/ACA box 80A snoRNA chr6-7107 chr6 34583693 34583903 + 7.07 0.000 Intergenic Intergenic -27465 NM_001252294 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr22-2279 chr22 33430464 33430674 + 7.07 0.000 intron (NM_133642, intron 7 of 14) intron (NM_133642, intron 7 of 14) 6100 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr8-4620 chr8 132186052 132186262 + 7.07 0.000 exon (NM_004519, exon 2 of 15) exon (NM_004519, exon 2 of 15) -80892 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr13-4007 chr13 71153796 71154006 + 7.07 0.000 intron (NR_047699, intron 2 of 3) L1PA14|LINE|L1 138760 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr18-2562 chr18 6661968 6662178 + 7.07 0.000 Intergenic Intergenic -67643 NM_001366231 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr9-3397 chr9 130503992 130504202 + 7.07 0.000 Intergenic L1MEc|LINE|L1 59136 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr14-3770 chr14 53501875 53502085 + 7.07 0.000 Intergenic Intergenic 348626 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr10-5050 chr10 36926963 36927173 + 7.07 0.000 Intergenic Intergenic -198789 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr10-4792 chr10 7043266 7043476 + 7.07 0.000 Intergenic Intergenic 143413 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr9-4980 chr9 19429684 19429894 + 7.07 0.000 intron (NM_001010887, intron 3 of 5) MIR3|SINE|MIR 20780 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr20-2428 chr20 23785530 23785740 + 7.07 0.000 Intergenic LTR16C|LTR|ERVL -34698 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr5-5538 chr5 146389755 146389965 + 7.07 0.000 Intergenic L2a|LINE|L2 51021 NM_002700 5459 Hs.553499 NM_002700 ENSG00000091010 POU4F3 BRN3C|DFNA15|DFNA42|DFNA52 POU class 4 homeobox 3 protein-coding chrX-4510 chrX 65907229 65907439 + 7.07 0.000 Intergenic L1ME4c|LINE|L1 -111536 NR_029637 407008 NR_029637 ENSG00000284567 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA chr16-6876 chr16 84161920 84162130 + 7.07 0.000 intron (NM_178452, intron 6 of 11) intron (NM_178452, intron 6 of 11) 2985 NM_001318756 123872 Hs.310164 NM_178452 ENSG00000154099 DNAAF1 CILD13|LRRC50|ODA7|swt dynein axonemal assembly factor 1 protein-coding chr1-9646 chr1 47434339 47434549 + 7.07 0.000 non-coding (NR_026878, exon 1 of 1) non-coding (NR_026878, exon 1 of 1) 197 NR_026878 84793 Hs.127762 NM_032707 ENSG00000237424 FOXD2-AS1 - FOXD2 adjacent opposite strand RNA 1 ncRNA chr2-5067 chr2 8362919 8363129 + 7.07 0.000 Intergenic MIR1_Amn|SINE|MIR -34605 NR_152741 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr2-5953 chr2 37985405 37985615 + 7.07 0.000 intron (NM_001170793, intron 4 of 9) L3|LINE|CR1 35046 NM_144713 151393 Hs.591566 NM_144713 ENSG00000115841 RMDN2 BLOCK18|FAM82A|FAM82A1|PRO34163|PYST9371|RMD-2|RMD2|RMD4 regulator of microtubule dynamics 2 protein-coding chr6-5168 chr6 127458288 127458498 + 7.07 0.000 intron (NM_001012279, intron 7 of 11) intron (NM_001012279, intron 7 of 11) 996 NM_014702 9729 Hs.319247 NM_014702 ENSG00000189367 KIAA0408 - KIAA0408 protein-coding chr15-2648 chr15 73736769 73736979 + 7.07 0.000 3' UTR (NM_001303254, exon 3 of 3) 3' UTR (NM_001303254, exon 3 of 3) 14601 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr10-4789 chr10 6222284 6222494 + 7.07 0.000 intron (NM_001314063, intron 10 of 15) L1MB7|LINE|L1 19457 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr2-12825 chr2 95001707 95001917 + 7.07 0.000 Intergenic Intergenic -23843 NM_022438 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr20-3794 chr20 22562319 22562529 + 7.07 0.000 non-coding (NR_001558, exon 4 of 4) non-coding (NR_001558, exon 4 of 4) 16218 NR_001558 140828 Hs.9842 NR_001558 ENSG00000259974 LINC00261 ALIEN|C20orf56|DEANR1|FALCOR|HCCDR1|NCRNA00261|TCONS_00027846|onco-lncRNA-17 long intergenic non-protein coding RNA 261 ncRNA chr11-8353 chr11 80174375 80174585 + 7.07 0.000 Intergenic Intergenic 588323 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr5-5983 chr5 127598304 127598514 + 7.07 0.000 Intergenic Intergenic -50612 NM_001048252 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding chr1-11536 chr1 165140422 165140632 + 7.07 0.000 Intergenic Intergenic 215714 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr2-8829 chr2 171451492 171451702 + 7.07 0.000 intron (NM_001164821, intron 5 of 11) AluSc|SINE|Alu -16794 NM_024770 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr2-8433 chr2 119697692 119697902 + 7.07 0.000 intron (NR_148341, intron 7 of 16) LTR48|LTR|ERV1 18596 NR_148341 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr7-5667 chr7 64027016 64027226 + 7.07 0.000 intron (NR_039987, intron 3 of 3) BSR/Beta|Satellite|Satellite 2981 NR_039987 100506050 Hs.405628 NR_039987 ENSG00000228564 LINC01005 - long intergenic non-protein coding RNA 1005 ncRNA chr5-4533 chr5 15823527 15823737 + 7.07 0.000 intron (NM_001278317, intron 2 of 3) L3|LINE|CR1 -111550 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr1-10902 chr1 207813529 207813739 + 7.07 0.000 intron (NR_135299, intron 4 of 5) intron (NR_135299, intron 4 of 5) -4745 NR_026817 148696 Hs.125511 NM_001039568 LOC148696 - uncharacterized LOC148696 ncRNA chr2-7534 chr2 22235992 22236202 + 7.07 0.000 Intergenic Intergenic -300382 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr5-5980 chr5 125659775 125659985 + 7.07 0.000 Intergenic Intergenic 166619 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chrX-5227 chrX 136259635 136259845 + 7.07 0.000 Intergenic Intergenic -3258 NM_001173516 79649 Hs.446275 NM_024597 ENSG00000129680 MAP7D3 MDP3 MAP7 domain containing 3 protein-coding chr1-15377 chr1 150713138 150713348 + 7.07 0.000 intron (NM_032132, intron 5 of 14) L2a|LINE|L2 7652 NM_001199829 84072 Hs.298312 NM_032132 ENSG00000143452 HORMAD1 CT46|NOHMA HORMA domain containing 1 protein-coding chr15-4537 chr15 55803100 55803310 + 7.07 0.000 Intergenic Intergenic -60053 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chrX-2234 chrX 45352834 45353044 + 7.07 0.000 Intergenic Intergenic -152063 NM_024689 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr19-6380 chr19 12900305 12900515 + 7.07 0.000 TTS (NM_000159) TTS (NM_000159) 9250 NM_013976 2639 Hs.532699 NM_000159 ENSG00000105607 GCDH ACAD5|GCD glutaryl-CoA dehydrogenase protein-coding chr22-2508 chr22 23104583 23104793 + 7.07 0.000 intron (NM_002073, intron 2 of 2) intron (NM_002073, intron 2 of 2) 34169 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr5-6116 chr5 28473263 28473473 + 7.07 0.000 Intergenic Intergenic -185703 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr5-5873 chr5 6784131 6784341 + 7.07 0.000 Intergenic MLT2B2|LTR|ERVL -11644 NR_146281 109729133 Hs.582455 NR_146281 ENSG00000251365 LINC02236 - long intergenic non-protein coding RNA 2236 ncRNA chr5-8103 chr5 97167707 97167917 + 7.07 0.000 exon (NM_001159749, exon 8 of 8) exon (NM_001159749, exon 8 of 8) 15435 NM_001159749 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding chr6-8381 chr6 149919330 149919540 + 7.07 0.000 TTS (NR_045126) TTS (NR_045126) 3686 NR_130110 353091 Hs.535023 NM_001001788 ENSG00000203722 RAET1G ULBP5 retinoic acid early transcript 1G protein-coding chr5-8695 chr5 141960686 141960896 + 7.07 0.000 Intergenic Intergenic -1729 NM_016580 51294 Hs.439474 NM_016580 ENSG00000113555 PCDH12 VE-cadherin-2|VECAD2 protocadherin 12 protein-coding chr3-10989 chr3 178919933 178920143 + 7.07 0.000 Intergenic L1PA15|LINE|L1 -59633 NR_126560 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr5-7002 chr5 153737832 153738042 + 7.07 0.000 intron (NM_000827, intron 11 of 15) intron (NM_000827, intron 11 of 15) 161050 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr1-4874 chr1 32741611 32741821 + 7.07 0.000 promoter-TSS (NM_020888) promoter-TSS (NM_020888) -114 NM_020888 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr4-5793 chr4 80529326 80529536 + 7.07 0.000 intron (NM_152770, intron 2 of 5) intron (NM_152770, intron 2 of 5) 193711 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr10-7758 chr10 33655682 33655892 + 7.07 0.000 Intergenic MER91A|DNA|hAT-Tip100 116893 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chrX-4860 chrX 104860530 104860740 + 7.07 0.000 intron (NM_017416, intron 2 of 10) Tigger4a|DNA|TcMar-Tigger 294436 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr16-5232 chr16 29728442 29728652 + 7.07 0.000 Intergenic Intergenic 17443 NM_175900 283897 Hs.331095 NM_175900 ENSG00000185905 C16orf54 - chromosome 16 open reading frame 54 protein-coding chr15-3031 chr15 58608695 58608905 + 7.07 0.000 intron (NM_001320570, intron 13 of 14) intron (NM_001320570, intron 13 of 14) 84807 NR_073415 664618 Hs.670224 NR_002927 HSP90AB4P HSP90Bd heat shock protein 90 alpha family class B member 4, pseudogene pseudo chr7-7941 chr7 10438764 10438974 + 7.07 0.000 Intergenic Intergenic -263807 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr10-7787 chr10 36115706 36115916 + 7.07 0.000 Intergenic Intergenic 337509 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr5-6136 chr5 35094696 35094906 + 7.07 0.000 intron (NR_037910, intron 1 of 7) intron (NR_037910, intron 1 of 7) 23321 NR_037910 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr17-7329 chr17 5771049 5771259 + 7.07 0.000 Intergenic LTR12C|LTR|ERV1 -1080 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr10-7230 chr10 121148965 121149175 + 7.07 0.000 Intergenic Intergenic 297708 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr12-3790 chr12 55664466 55664676 + 7.07 0.000 Intergenic Intergenic -17165 NM_152637 196410 Hs.51483 NM_152637 ENSG00000170439 METTL7B ALDI methyltransferase like 7B protein-coding chr11-8909 chr11 16717381 16717591 + 7.07 0.000 intron (NM_001367872, intron 1 of 16) intron (NM_001367872, intron 1 of 16) 20991 NM_001367872 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr5-5877 chr5 8429435 8429645 + 7.07 0.000 intron (NR_039984, intron 2 of 5) MER52A|LTR|ERV1 28024 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr10-7310 chr10 132805633 132805843 + 7.07 0.000 Intergenic Intergenic -19591 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr1-12084 chr1 154682346 154682556 + 7.07 0.000 Intergenic Intergenic -54454 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr1-9230 chr1 22911292 22911502 + 7.07 0.000 intron (NM_004442, intron 14 of 15) (CA)n|Simple_repeat|Simple_repeat -48171 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr6-4282 chr6 12841178 12841388 + 7.07 0.000 intron (NM_001322308, intron 3 of 13) MIRb|SINE|MIR -116073 NM_001322311 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr4-3160 chr4 186501564 186501774 + 7.07 0.000 promoter-TSS (NR_033900) promoter-TSS (NR_033900) -611 NR_033900 285441 Hs.481369 NR_033900 ENSG00000251165 F11-AS1 - F11 antisense RNA 1 ncRNA chr17-3767 chr17 32495239 32495449 + 7.07 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 8351 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr12-6796 chr12 10623196 10623406 + 7.07 0.000 intron (NM_018423, intron 8 of 10) intron (NM_018423, intron 8 of 10) -9692 NM_018048 55110 Hs.104650 NM_018048 ENSG00000111196 MAGOHB MGN2|mago|magoh mago homolog B, exon junction complex subunit protein-coding chr12-6341 chr12 56781863 56782073 + 7.07 0.000 intron (NM_003725, intron 2 of 4) intron (NM_003725, intron 2 of 4) 18644 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chrX-4965 chrX 113704575 113704785 + 7.07 0.000 intron (NR_131204, intron 1 of 2) MER74B|LTR|ERVL 233538 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr5-8102 chr5 97101228 97101438 + 7.07 0.000 intron (NM_153234, intron 4 of 5) intron (NM_153234, intron 4 of 5) 41278 NM_153234 167410 Hs.656702 NM_153234 ENSG00000145721 LIX1 C5orf11|Lft limb and CNS expressed 1 protein-coding chrX-4728 chrX 91264702 91264912 + 7.07 0.000 Intergenic L1PA13|LINE|L1 -170032 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr18-2357 chr18 47166975 47167185 + 7.07 0.000 intron (NM_016097, intron 1 of 2) AluSx|SINE|Alu 9284 NM_016097 51124 Hs.130917 NM_016097 ENSG00000134049 IER3IP1 HSPC039|MEDS|PRO2309 immediate early response 3 interacting protein 1 protein-coding chrX-3604 chrX 82679713 82679923 + 7.07 0.000 Intergenic L1MC1|LINE|L1 -828472 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr1-15974 chr1 193642028 193642238 + 7.07 0.000 Intergenic L1PA7|LINE|L1 337388 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr1-15995 chr1 196951785 196951995 + 7.07 0.000 intron (NM_005666, intron 3 of 4) L1MEc|LINE|L1 8122 NM_001312672 3080 Hs.632450 NM_005666 ENSG00000080910 CFHR2 CFHL2|FHR2|HFL3 complement factor H related 2 protein-coding chr4-7211 chr4 42111228 42111438 + 7.07 0.000 3' UTR (NM_001159547, exon 6 of 6) 3' UTR (NM_001159547, exon 6 of 6) 41322 NM_001159547 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr4-6368 chr4 107176118 107176328 + 7.07 0.000 Intergenic MLT1G-int|LTR|ERVL-MaLR -139910 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr3-5841 chr3 32564432 32564642 + 7.07 0.000 intron (NM_016141, intron 2 of 12) MER58A|DNA|hAT-Charlie 6321 NM_016141 51143 Hs.529495 NM_016141 ENSG00000144635 DYNC1LI1 DLC-A|DNCLI1|LIC1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding chr19-4269 chr19 294022 294232 + 7.07 0.000 Intergenic MIR|SINE|MIR -2724 NM_177526 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr2-12558 chr2 68720817 68721027 + 7.07 0.000 Intergenic Intergenic -13889 NM_001364819 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding chr17-4287 chr17 75606261 75606471 + 7.07 0.000 intron (NM_001309242, intron 20 of 62) AluSq|SINE|Alu 18308 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chrX-2893 chrX 149056378 149056588 + 7.07 0.000 Intergenic Intergenic 337392 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr1-11059 chr1 225471330 225471540 + 7.07 0.000 Intergenic Intergenic -42580 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr13-4098 chr13 78447227 78447437 + 7.07 0.000 intron (NR_047001, intron 3 of 5) intron (NR_047001, intron 3 of 5) -148790 NR_158457 780529 Hs.587755 NR_158457 LOC780529 - uncharacterized LOC780529 ncRNA chr8-6920 chr8 102612623 102612833 + 7.07 0.000 Intergenic Intergenic 41236 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr3-11094 chr3 185506583 185506793 + 7.07 0.000 3' UTR (NM_139248, exon 10 of 10) 3' UTR (NM_139248, exon 10 of 10) -7653 NM_080652 90407 Hs.677570 NM_080652 ENSG00000163900 TMEM41A 2900010K02Rik transmembrane protein 41A protein-coding chr8-3196 chr8 117937153 117937363 + 7.07 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -16345 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr4-7724 chr4 89948710 89948920 + 7.07 0.000 intron (NM_001371403, intron 7 of 8) intron (NM_001371403, intron 7 of 8) 53961 NM_007351 22915 Hs.268107 NM_007351 ENSG00000138722 MMRN1 ECM|EMILIN4|GPIa*|MMRN multimerin 1 protein-coding chr9-7999 chr9 93919618 93919828 + 7.07 0.000 Intergenic AluSp|SINE|Alu 35632 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr13-4251 chr13 97089066 97089276 + 7.07 0.000 Intergenic L1ME1|LINE|L1 90451 NR_125725 103625683 Hs.679591 NR_125725 ENSG00000233124 LINC00456 - long intergenic non-protein coding RNA 456 ncRNA chr15-2810 chr15 38193599 38193809 + 7.07 0.000 Intergenic Intergenic -59132 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr1-5973 chr1 35692457 35692667 + 7.07 0.000 Intergenic MLT2B1|LTR|ERVL 24349 NM_001348691 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr1-11191 chr1 241619054 241619264 + 7.07 0.000 intron (NM_014322, intron 1 of 3) intron (NM_014322, intron 1 of 3) 16771 NM_001821 1122 Hs.654545 NM_001821 ENSG00000203668 CHML REP2 CHM like Rab escort protein protein-coding chr9-8835 chr9 135454989 135455199 + 7.07 0.000 Intergenic MLT1M|LTR|ERVL-MaLR 17155 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr7-3166 chr7 93427407 93427617 + 7.07 0.000 intron (NM_001164738, intron 12 of 12) intron (NM_001164738, intron 12 of 12) 55343 NR_030388 724023 NR_030388 ENSG00000208014 MIR653 MIRN653|hsa-mir-653|mir-653 microRNA 653 ncRNA chr11-10623 chr11 125262721 125262931 + 7.07 0.000 intron (NM_022062, intron 2 of 12) intron (NM_022062, intron 2 of 12) 98075 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr10-8391 chr10 82599055 82599265 + 7.07 0.000 intron (NR_163253, intron 3 of 10) L2|LINE|L2 -366240 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr5-7523 chr5 37025149 37025359 + 7.07 0.000 intron (NM_015384, intron 30 of 45) AluJr|SINE|Alu 148485 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr2-13525 chr2 151490935 151491145 + 7.07 0.000 intron (NM_001271208, intron 180 of 182) AluJb|SINE|Alu 81138 NM_018151 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding chr4-8207 chr4 134974856 134975066 + 7.07 0.000 Intergenic L1MA3|LINE|L1 148598 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr3-10183 chr3 118841976 118842186 + 7.07 0.000 Intergenic L1M4|LINE|L1 -31248 NR_135547 105374060 Hs.99062 NR_135547 LOC105374060 - uncharacterized LOC105374060 ncRNA chr3-8793 chr3 5390773 5390983 + 7.07 0.000 Intergenic Intergenic -140623 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr1-11839 chr1 34347734 34347944 + 7.07 0.000 Intergenic Intergenic 170932 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr15-1907 chr15 78193943 78194153 + 7.07 0.000 intron (NM_015162, intron 3 of 13) intron (NM_015162, intron 3 of 13) 40517 NM_015162 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr15-5269 chr15 99076463 99076673 + 7.07 0.000 Intergenic Intergenic -28512 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr11-7715 chr11 71928017 71928227 + 7.07 0.000 promoter-TSS (NR_024147) promoter-TSS (NR_024147) 325 NR_029192 100133315 Hs.150324 NR_029192 LOC100133315 - transient receptor potential cation channel, subfamily C, member 2-like pseudo chr19-6580 chr19 22302084 22302294 + 7.07 0.000 intron (NM_001242680, intron 1 of 3) intron (NM_001242680, intron 1 of 3) 15748 NM_001242680 100287226 Hs.531629 NM_001242680 ENSG00000196350 ZNF729 - zinc finger protein 729 protein-coding chr1-6519 chr1 26150858 26151068 + 7.07 0.000 Intergenic AluJr|SINE|Alu -8116 NM_024869 79927 Hs.694119 NM_024869 ENSG00000197245 FAM110D GRRP1 family with sequence similarity 110 member D protein-coding chr6-7066 chr6 28324115 28324325 + 7.07 0.000 TTS (NM_001243241) TTS (NM_001243241) 11914 NM_001135216 64288 Hs.656413 NM_030899 ENSG00000235109 ZSCAN31 ZNF20-Lp|ZNF310P|ZNF323 zinc finger and SCAN domain containing 31 protein-coding chr10-5007 chr10 32772613 32772823 + 7.07 0.000 intron (NM_001321115, intron 29 of 43) L1PBa|LINE|L1 128754 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr6-7209 chr6 39626924 39627134 + 7.07 0.000 intron (NM_001289020, intron 5 of 21) intron (NM_001289020, intron 5 of 21) 98379 NM_001289020 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr3-10209 chr3 121216567 121216777 + 7.07 0.000 intron (NM_001348343, intron 10 of 27) L1PA7|LINE|L1 167032 NR_049861 100847043 NR_049861 ENSG00000264477 MIR5682 - microRNA 5682 ncRNA chr7-5541 chr7 45442058 45442268 + 7.07 0.000 Intergenic MER45A|DNA|hAT-Tip100 -131977 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr8-3778 chr8 25180163 25180373 + 7.07 0.000 Intergenic Intergenic -4421 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr10-6504 chr10 59512915 59513125 + 7.07 0.000 Intergenic Intergenic -149839 NM_001347840 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr17-4942 chr17 77681937 77682147 + 7.07 0.000 Intergenic Intergenic 46517 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr5-8338 chr5 118779630 118779840 + 7.07 0.000 Intergenic LOR1-int|LTR|ERV1 183547 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chr19-4660 chr19 16611116 16611326 + 7.07 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) 16983 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr17-7078 chr17 66418265 66418475 + 7.07 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -1516 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chrX-2355 chrX 65772684 65772894 + 7.07 0.000 Intergenic Intergenic 105135 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr6-4448 chr6 34664333 34664543 + 7.07 0.000 intron (NM_022758, intron 1 of 3) FLAM_A|SINE|Alu -31716 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr4-5404 chr4 4383585 4383795 + 7.07 0.000 Intergenic Intergenic -2566 NM_001287763 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr5-6865 chr5 120701896 120702106 + 7.07 0.000 Intergenic HERVH-int|LTR|ERV1 170537 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr5-6867 chr5 121329023 121329233 + 7.07 0.000 Intergenic Intergenic 6578 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr2-9446 chr2 233955337 233955547 + 7.07 0.000 intron (NM_024080, intron 11 of 25) MIRb|SINE|MIR 38069 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|LTrpC-6|TRPP8|trp-p8 transient receptor potential cation channel subfamily M member 8 protein-coding chrX-1650 chrX 135398047 135398257 + 7.07 0.000 TTS (NR_104652) TTS (NR_104652) 1723 NR_104652 100506790 Hs.161358 NR_104652 ENSG00000229015 LOC100506790 - uncharacterized LOC100506790 ncRNA chr1-9398 chr1 31511300 31511510 + 7.07 0.000 Intergenic Intergenic -7030 NR_027085 284551 Hs.658659 NR_027085 LINC01226 - long intergenic non-protein coding RNA 1226 ncRNA chr7-8011 chr7 17380864 17381074 + 7.07 0.000 intron (NR_110015, intron 1 of 2) intron (NR_110015, intron 1 of 2) 6052 NR_110015 102659288 Hs.559488 NR_110014 KCCAT333 - renal clear cell carcinoma-associated transcript 333 ncRNA chr6-5140 chr6 124058985 124059195 + 7.07 0.000 intron (NM_001040214, intron 1 of 6) intron (NM_001040214, intron 1 of 6) -223915 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr3-9384 chr3 47557347 47557557 + 7.07 0.000 Intergenic Intergenic 21413 NM_001206943 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr5-2726 chr5 123098918 123099128 + 7.07 0.000 intron (NM_001136239, intron 2 of 7) CpG -8707 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr12-7980 chr12 111071464 111071674 + 7.07 0.000 intron (NM_015267, intron 1 of 21) L1MC1|LINE|L1 -28435 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr10-8187 chr10 71602527 71602737 + 7.07 0.000 intron (NM_052836, intron 9 of 12) intron (NM_052836, intron 9 of 12) -90712 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr1-9487 chr1 36943762 36943972 + 7.07 0.000 intron (NM_000831, intron 1 of 15) intron (NM_000831, intron 1 of 15) 90648 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr17-4433 chr17 42990286 42990496 + 7.07 0.000 exon (NM_001321381, exon 5 of 6) exon (NM_001321381, exon 5 of 6) -7882 NM_001349921 6155 Hs.514196 NM_000988 ENSG00000131469 RPL27 DBA16|L27 ribosomal protein L27 protein-coding chr16-7110 chr16 89595018 89595228 + 7.07 0.000 intron (NM_153636, intron 13 of 14) intron (NM_153636, intron 13 of 14) -18185 NM_001128141 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr14-2618 chr14 60618080 60618290 + 7.07 0.000 Intergenic Intergenic -21031 NR_126480 104548971 NR_126480 SALRNA1 SAL-RNA1|XLOC_023166 senescence associated long non-coding RNA 1 ncRNA chr7-1990 chr7 2425218 2425428 + 7.07 0.000 intron (NM_018641, intron 1 of 1) intron (NM_018641, intron 1 of 1) 21712 NM_001243795 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr6-3472 chr6 2976604 2976814 + 7.07 0.000 Intergenic Intergenic -4544 NM_001271824 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr5-7358 chr5 18465697 18465907 + 7.07 0.000 Intergenic Intergenic 658528 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr3-10085 chr3 109378551 109378761 + 7.07 0.000 Intergenic AluY|SINE|Alu -31334 NR_109842 401082 Hs.477089 NM_001145553 ENSG00000228980 LINC01205 - long intergenic non-protein coding RNA 1205 ncRNA chr1-10407 chr1 157144600 157144810 + 7.07 0.000 Intergenic Intergenic -6114 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr12-6975 chr12 29059471 29059681 + 7.07 0.000 Intergenic Intergenic -89702 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr2-12922 chr2 100959387 100959597 + 7.07 0.000 intron (NM_002518, intron 7 of 20) intron (NM_002518, intron 7 of 20) 17669 NR_110213 101927142 Hs.656556 NR_110213 LOC101927142 - uncharacterized LOC101927142 ncRNA chr3-10571 chr3 141524111 141524321 + 7.07 0.000 intron (NM_006506, intron 3 of 23) MLT1H2|LTR|ERVL-MaLR 37189 NM_001303245 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr1-6391 chr1 10647444 10647654 + 7.07 0.000 3' UTR (NM_017766, exon 16 of 16) 3' UTR (NM_017766, exon 16 of 16) 149097 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr3-7943 chr3 157467453 157467663 + 7.07 0.000 intron (NM_024621, intron 3 of 13) intron (NM_024621, intron 3 of 13) 27948 NM_001167917 79674 Hs.658046 NM_024621 ENSG00000197415 VEPH1 MELT|VEPH ventricular zone expressed PH domain containing 1 protein-coding chr4-8112 chr4 126194676 126194886 + 7.07 0.000 Intergenic Intergenic 687522 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr11-5939 chr11 16262386 16262596 + 7.07 0.000 intron (NM_033326, intron 3 of 15) MamRTE1|LINE|RTE-BovB 94055 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr16-2898 chr16 840077 840287 + 7.07 0.000 Intergenic Intergenic 34739 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr16-4519 chr16 60714234 60714444 + 7.07 0.000 Intergenic Intergenic 341427 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr2-12696 chr2 77068926 77069136 + 7.07 0.000 intron (NR_146416, intron 1 of 1) MER9a2|LTR|ERVK 83066 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr9-6950 chr9 98572429 98572639 + 7.07 0.000 intron (NM_005458, intron 2 of 18) intron (NM_005458, intron 2 of 18) 136401 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr2-14516 chr2 228739197 228739407 + 7.07 0.000 Intergenic L1MA4|LINE|L1 -127907 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr3-6989 chr3 169184769 169184979 + 7.07 0.000 intron (NM_001205194, intron 1 of 15) L2|LINE|L2 -37403 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr8-1893 chr8 23930457 23930667 + 7.07 0.000 Intergenic Intergenic -75756 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr20-2341 chr20 11810854 11811064 + 7.07 0.000 intron (NR_110635, intron 1 of 1) intron (NR_110635, intron 1 of 1) 59756 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr10-7474 chr10 9879538 9879748 + 7.07 0.000 Intergenic MER74B|LTR|ERVL -179079 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA chr3-8775 chr3 4343157 4343367 + 7.07 0.000 Intergenic Intergenic 39958 NM_001320676 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr9-4968 chr9 18040042 18040252 + 7.07 0.000 Intergenic BLACKJACK|DNA|hAT-Blackjack -434006 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr6-1492 chr6 99697006 99697216 + 7.07 0.000 Intergenic L1M1|LINE|L1 90337 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr12-2732 chr12 10732733 10732943 + 7.07 0.000 Intergenic Intergenic -9515 NM_001145426 8531 Hs.221889 NM_003651 ENSG00000060138 YBX3 CSDA|CSDA1|DBPA|ZONAB Y-box binding protein 3 protein-coding chr7-9230 chr7 120303551 120303761 + 7.07 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 30481 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr5-6863 chr5 120200024 120200234 + 7.07 0.000 Intergenic Intergenic -264149 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr4-3415 chr4 59667326 59667536 + 7.07 0.000 Intergenic Intergenic 653858 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr16-5751 chr16 86243995 86244205 + 7.07 0.000 intron (NR_104139, intron 3 of 5) intron (NR_104139, intron 3 of 5) 42147 NR_104139 101154687 Hs.640512 NR_104139 LINC01081 TCONS00024764|TCONS_00024764 long intergenic non-protein coding RNA 1081 ncRNA chr3-10173 chr3 117485610 117485820 + 7.07 0.000 Intergenic Intergenic 205210 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr3-4683 chr3 48203214 48203424 + 7.07 0.000 Intergenic PRIMA41-int|LTR|ERV1 6755 NR_039645 100616407 NR_039645 ENSG00000265483 MIR4443 mir-4443 microRNA 4443 ncRNA chr14-2908 chr14 38695222 38695432 + 7.07 0.000 Intergenic L1MA2|LINE|L1 -187269 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr1-13891 chr1 21845700 21845910 + 7.07 0.000 intron (NM_005529, intron 64 of 96) MIRb|SINE|MIR 33540 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr5-7928 chr5 79048426 79048636 + 7.07 0.000 intron (NR_104002, intron 2 of 11) intron (NR_104002, intron 2 of 11) 21143 NR_104002 29958 Hs.655653 NM_013391 ENSG00000132837 DMGDH DMGDHD|ME2GLYDH dimethylglycine dehydrogenase protein-coding chr6-5134 chr6 123228276 123228486 + 7.07 0.000 intron (NM_006073, intron 38 of 40) THE1C|LTR|ERVL-MaLR -211223 NR_110844 101927990 Hs.660877 NR_110844 TRDN-AS1 HRAT13 TRDN antisense RNA 1 ncRNA chr5-2654 chr5 10352982 10353192 + 7.07 0.000 promoter-TSS (NM_001270661) promoter-TSS (NM_001270661) -608 NM_001270661 10299 Hs.432862 NM_005885 ENSG00000145495 MARCH6 DOA10|MARCH-VI|RNF176|TEB4 membrane associated ring-CH-type finger 6 protein-coding chr20-4136 chr20 43463208 43463418 + 7.07 0.000 non-coding (NR_034009, exon 7 of 7) non-coding (NR_034009, exon 7 of 7) 5417 NR_034009 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr11-9099 chr11 32043664 32043874 + 7.07 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -2451 NR_120526 100506675 Hs.446169 NR_120526 ENSG00000254584 LOC100506675 - uncharacterized LOC100506675 ncRNA chr11-6853 chr11 98633355 98633565 + 7.07 0.000 Intergenic MER41A|LTR|ERV1 -387489 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr12-7571 chr12 75447871 75448081 + 7.07 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -32779 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr17-8203 chr17 63514272 63514482 + 7.07 0.000 Intergenic AluSq2|SINE|Alu -8981 NM_001278920 81033 Hs.591177 NM_030779 ENSG00000173826 KCNH6 ERG-2|ERG2|HERG2|Kv11.2|hERG-2 potassium voltage-gated channel subfamily H member 6 protein-coding chr10-7652 chr10 25699460 25699670 + 7.07 0.000 intron (NR_108067, intron 3 of 4) intron (NR_108067, intron 3 of 4) 47853 NR_108067 101929052 Hs.128298 NR_108067 ENSG00000280809 LINC00836 - long intergenic non-protein coding RNA 836 ncRNA chr2-7403 chr2 8583459 8583669 + 7.07 0.000 intron (NR_110257, intron 1 of 5) intron (NR_110257, intron 1 of 5) 228 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr17-4734 chr17 39546231 39546441 + 7.07 0.000 Intergenic AluY|SINE|Alu 61584 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr8-3797 chr8 26971029 26971239 + 7.07 0.000 Intergenic MER121|DNA|hAT? 77829 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA chr19-6575 chr19 21156137 21156347 + 7.07 0.000 intron (NR_138052, intron 3 of 6) intron (NR_138052, intron 3 of 6) 14202 NM_133473 170959 Hs.156256 NM_133473 ENSG00000196705 ZNF431 - zinc finger protein 431 protein-coding chr6-5931 chr6 69428560 69428770 + 7.07 0.000 Intergenic Intergenic 367801 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chrX-2644 chrX 111636609 111636819 + 7.07 0.000 Intergenic LTR37-int|LTR|ERV1 -44404 NR_033125 79868 Hs.443061 NM_018466 ENSG00000101901 ALG13 CDG1S|CXorf45|EIEE36|GLT28D1|MDS031|TDRD13|YGL047W ALG13 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr6-4166 chr6 938456 938666 + 7.07 0.000 Intergenic MER74A|LTR|ERVL 70063 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr3-4838 chr3 145161669 145161879 + 7.07 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 907411 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr8-2540 chr8 27281054 27281264 + 7.07 0.000 Intergenic Intergenic -22755 NM_001283055 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding chr7-9182 chr7 115558500 115558710 + 7.07 0.000 Intergenic Intergenic 22836 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr9-6430 chr9 73983863 73984073 + 7.07 0.000 Intergenic L1PA14|LINE|L1 -387563 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr20-3669 chr20 12047820 12048030 + 7.07 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 130032 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr8-2705 chr8 96576082 96576292 + 7.07 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -69055 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr5-4784 chr5 56152301 56152511 + 7.07 0.000 intron (NM_024669, intron 6 of 11) Tigger16b|DNA|TcMar-Tigger 80924 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr1-16099 chr1 203594970 203595180 + 7.07 0.000 Intergenic AluJb|SINE|Alu -31712 NM_001001396 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr12-4856 chr12 59280469 59280679 + 7.07 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger -315455 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chrX-3810 chrX 142117982 142118192 + 7.07 0.000 Intergenic Intergenic 87203 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr16-6380 chr16 52787055 52787265 + 7.07 0.000 Intergenic Intergenic -180185 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr1-10578 chr1 175176643 175176853 + 7.07 0.000 intron (NM_001319231, intron 2 of 4) intron (NM_001319231, intron 2 of 4) 16028 NM_001162895 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr2-10118 chr2 63255313 63255523 + 7.07 0.000 intron (NR_148705, intron 13 of 16) MSTB|LTR|ERVL-MaLR -135876 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr2-14730 chr2 239015213 239015423 + 7.07 0.000 Intergenic Intergenic 53596 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr3-10286 chr3 125123983 125124193 + 7.07 0.000 intron (NM_001195483, intron 5 of 12) intron (NM_001195483, intron 5 of 12) 27464 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr4-5745 chr4 56641596 56641806 + 7.07 0.000 Intergenic Intergenic 14821 NM_139211 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding chr12-3098 chr12 20201967 20202177 + 7.07 0.000 Intergenic L1PB3|LINE|L1 -74171 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr12-3757 chr12 49146925 49147135 + 7.07 0.000 Intergenic FLAM_A|SINE|Alu -15635 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr9-7289 chr9 8653427 8653637 + 7.07 0.000 intron (NM_130392, intron 1 of 30) intron (NM_130392, intron 1 of 30) 80414 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr20-3633 chr20 8583751 8583961 + 7.07 0.000 intron (NM_182734, intron 3 of 32) intron (NM_182734, intron 3 of 32) -247329 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr2-12054 chr2 30794138 30794348 + 7.07 0.000 intron (NM_144575, intron 1 of 22) L1ME1|LINE|L1 13203 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr12-6682 chr12 3275657 3275867 + 7.07 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 90360 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr2-9203 chr2 216889156 216889366 + 7.07 0.000 Intergenic Intergenic 18489 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr19-1939 chr19 16234225 16234435 + 7.07 0.000 intron (NM_032493, intron 11 of 11) intron (NM_032493, intron 11 of 11) 36419 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr8-6625 chr8 76998864 76999074 + 7.07 0.000 intron (NM_001172086, intron 2 of 4) intron (NM_001172086, intron 2 of 4) 1109 NM_000318 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding chr2-5890 chr2 241051562 241051772 + 7.07 0.000 intron (NM_001080437, intron 12 of 31) intron (NM_001080437, intron 12 of 31) 50620 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr8-6774 chr8 93143000 93143210 + 7.07 0.000 intron (NR_161372, intron 1 of 2) intron (NR_161372, intron 1 of 2) 23745 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr2-7009 chr2 146661572 146661782 + 7.07 0.000 Intergenic Intergenic 74620 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr20-3858 chr20 25590520 25590730 + 7.07 0.000 Intergenic Intergenic -5094 NM_001318226 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr10-3136 chr10 58609099 58609309 + 7.07 0.000 intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 96332 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chrX-3361 chrX 141641029 141641239 + 7.07 0.000 intron (NR_037183, intron 3 of 3) Tigger3b|DNA|TcMar-Tigger 15270 NM_001318917 645188 Hs.679802 NM_001318917 LOC645188 SPANX-L uncharacterized LOC645188 protein-coding chr18-2912 chr18 12088269 12088479 + 7.07 0.000 Intergenic (CCTGGC)n|Simple_repeat|Simple_repeat -5469 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr2-12766 chr2 85396963 85397173 + 7.07 0.000 intron (NM_001320732, intron 8 of 9) X7B_LINE|LINE|CR1 12764 NM_001320732 822 Hs.516155 NM_001747 ENSG00000042493 CAPG AFCP|HEL-S-66|MCP capping actin protein, gelsolin like protein-coding chr10-7561 chr10 16332265 16332475 + 7.07 0.000 Intergenic L2a|LINE|L2 -104573 NM_001261836 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr3-9180 chr3 34676354 34676564 + 7.07 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 717564 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr1-4954 chr1 53093526 53093736 + 7.07 0.000 intron (NR_109858, intron 5 of 10) intron (NR_109858, intron 5 of 10) 31418 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr13-2225 chr13 24394203 24394413 + 7.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR 62858 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr1-15577 chr1 160051809 160052019 + 7.07 0.000 intron (NM_002241, intron 1 of 1) intron (NM_002241, intron 1 of 1) 18246 NM_002241 3766 Hs.408960 NM_002241 ENSG00000177807 KCNJ10 BIRK-10|KCNJ13-PEN|KIR1.2|KIR4.1|SESAME potassium voltage-gated channel subfamily J member 10 protein-coding chr1-12740 chr1 62481122 62481332 + 7.07 0.000 intron (NM_001271999, intron 42 of 48) L2a|LINE|L2 44178 NM_003368 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr6-4034 chr6 129310857 129311067 + 7.07 0.000 intron (NM_000426, intron 22 of 64) intron (NM_000426, intron 22 of 64) 399215 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr1-14537 chr1 51670349 51670559 + 7.07 0.000 intron (NM_148906, intron 2 of 22) intron (NM_148906, intron 2 of 22) 53362 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr2-12154 chr2 38467744 38467954 + 7.07 0.000 intron (NR_110259, intron 4 of 4) L1ME3D|LINE|L1 36555 NR_146454 100996902 Hs.128280 NR_146454 ENSG00000235009 LINC01883 - long intergenic non-protein coding RNA 1883 ncRNA chr2-10785 chr2 43855241 43855451 + 7.07 0.000 intron (NM_001357321, intron 6 of 12) intron (NM_001357321, intron 6 of 12) 16375 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr1-6001 chr1 51326204 51326414 + 7.07 0.000 intron (NM_001144832, intron 1 of 17) L2b|LINE|L2 -3345 NR_123731 102724097 Hs.568648 NR_123731 ENSG00000261664 TTC39A-AS1 - TTC39A antisense RNA 1 ncRNA chr7-4363 chr7 56073395 56073605 + 7.07 0.000 intron (NM_001042470, intron 3 of 5) AluSx|SINE|Alu 9214 NM_001042469 25870 Hs.279696 NM_015411 ENSG00000129103 SUMF2 pFGE sulfatase modifying factor 2 protein-coding chr15-3842 chr15 83401090 83401300 + 7.07 0.000 Intergenic Intergenic -46033 NM_001301109 6457 Hs.270055 NM_003027 ENSG00000140600 SH3GL3 CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13 SH3 domain containing GRB2 like 3, endophilin A3 protein-coding chr2-13500 chr2 149371870 149372080 + 7.07 0.000 intron (NM_194317, intron 1 of 4) intron (NM_194317, intron 1 of 4) 41388 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr1-16606 chr1 238220150 238220360 + 7.07 0.000 Intergenic Intergenic 265762 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr3-10139 chr3 114235630 114235840 + 7.07 0.000 3' UTR (NM_007136, exon 1 of 1) 3' UTR (NM_007136, exon 1 of 1) 1843 NM_007136 7634 Hs.271079 NM_007136 ENSG00000174255 ZNF80 pT17 zinc finger protein 80 protein-coding chr1-16558 chr1 234093713 234093923 + 7.07 0.000 intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -120393 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr15-2560 chr15 51354261 51354471 + 7.07 0.000 intron (NM_181789, intron 1 of 9) intron (NM_181789, intron 1 of 9) 12711 NM_181789 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr11-4391 chr11 77128120 77128330 + 7.07 0.000 promoter-TSS (NM_001369365) promoter-TSS (NM_001369365) -21 NM_001369365 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr7-6765 chr7 15174607 15174817 + 7.07 0.000 Intergenic Intergenic -199854 NM_001350717 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr4-4672 chr4 85260246 85260456 + 7.07 0.000 Intergenic Intergenic -214799 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr8-3313 chr8 30089299 30089509 + 7.07 0.000 Intergenic Intergenic -6004 NM_015344 23484 Hs.146585 NM_015344 ENSG00000104660 LEPROTL1 HSPC112|Vps55|my047 leptin receptor overlapping transcript like 1 protein-coding chr11-3005 chr11 124548673 124548883 + 7.07 0.000 Intergenic Intergenic -5124 NM_001005195 219858 Hs.553634 NM_001005195 ENSG00000170953 OR8B12 OR11-317 olfactory receptor family 8 subfamily B member 12 protein-coding chr4-7327 chr4 56214909 56215119 + 7.07 0.000 intron (NM_020722, intron 2 of 10) AluSx3|SINE|Alu 44819 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr5-4202 chr5 116660020 116660230 + 7.07 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -85302 NM_020796 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding chr6-7573 chr6 72402015 72402225 + 7.07 0.000 3' UTR (NM_001168407, exon 25 of 25) 3' UTR (NM_001168407, exon 25 of 25) 35374 NM_001168411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr14-2999 chr14 53126601 53126811 + 7.07 0.000 intron (NM_030637, intron 1 of 11) intron (NM_030637, intron 1 of 11) 26617 NM_001160147 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding chr13-2601 chr13 74185616 74185826 + 7.07 0.000 Intergenic AluSz|SINE|Alu -45723 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr2-13567 chr2 155305061 155305271 + 7.07 0.000 Intergenic MER90a|LTR|ERV1 606471 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr5-5690 chr5 162372368 162372578 + 7.07 0.000 Intergenic Intergenic 304831 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding chr1-10190 chr1 111937334 111937544 + 7.07 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) 27782 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr6-8516 chr6 159123307 159123517 + 7.07 0.000 Intergenic Intergenic -45988 NM_032532 84624 Hs.520525 NM_032532 ENSG00000164694 FNDC1 AGS8|FNDC2|MEL4B3|bA243O10.1|dJ322A24.1 fibronectin type III domain containing 1 protein-coding chr11-8084 chr11 36008943 36009153 + 7.07 0.000 intron (NM_001304264, intron 1 of 5) intron (NM_001304264, intron 1 of 5) -1050 NR_039769 100616311 NR_039769 ENSG00000263389 MIR3973 - microRNA 3973 ncRNA chr13-2608 chr13 75432163 75432373 + 7.07 0.000 intron (NM_001286658, intron 1 of 19) intron (NM_001286658, intron 1 of 19) 49900 NM_001286658 9882 Hs.210891 NM_014832 ENSG00000136111 TBC1D4 AS160|NIDDM5 TBC1 domain family member 4 protein-coding chr1-8100 chr1 7667257 7667467 + 7.07 0.000 intron (NM_001349608, intron 8 of 21) intron (NM_001349608, intron 8 of 21) -2368 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr8-4534 chr8 123433915 123434125 + 7.07 0.000 intron (NM_018024, intron 3 of 5) MER30|DNA|hAT-Charlie 17246 NM_018024 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr11-9812 chr11 71067667 71067877 + 7.07 0.000 intron (NM_012309, intron 8 of 24) (CACCAT)n|Simple_repeat|Simple_repeat 157024 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr9-8308 chr9 114150673 114150883 + 7.07 0.000 Intergenic Intergenic -4759 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr12-7656 chr12 83273042 83273252 + 7.07 0.000 Intergenic L1PA7|LINE|L1 585992 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-7741 chr2 37561663 37561873 + 7.07 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 110431 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr5-3511 chr5 178432804 178433014 + 7.07 0.000 intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) 157484 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr5-5212 chr5 114782298 114782508 + 7.07 0.000 Intergenic Intergenic -8990 NR_130785 101927078 Hs.160027 NR_130785 LOC101927078 - uncharacterized LOC101927078 ncRNA chr4-7500 chr4 73917087 73917297 + 7.07 0.000 Intergenic Intergenic 47799 NM_001511 2919 Hs.789 NM_001511 ENSG00000163739 CXCL1 FSP|GRO1|GROa|MGSA|MGSA-a|NAP-3|SCYB1 C-X-C motif chemokine ligand 1 protein-coding chrX-2462 chrX 82653587 82653797 + 7.07 0.000 Intergenic Intergenic -854598 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr1-9653 chr1 47726395 47726605 + 7.07 0.000 Intergenic Intergenic 270885 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr6-8602 chr6 167748002 167748212 + 7.07 0.000 Intergenic Intergenic -47422 NR_149041 441179 Hs.192711 NR_149041 ENSG00000269155 LOC441179 - uncharacterized LOC441179 ncRNA chr16-2951 chr16 4706985 4707195 + 7.07 0.000 intron (NR_040252, intron 6 of 16) intron (NR_040252, intron 6 of 16) 13372 NM_001370587 84309 Hs.513315 NM_032349 ENSG00000168101 NUDT16L1 SDOS|TIRR nudix hydrolase 16 like 1 protein-coding chr2-10981 chr2 96554257 96554467 + 7.07 0.000 Intergenic Intergenic 16483 NM_001319092 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr6-5254 chr6 137026227 137026437 + 7.07 0.000 intron (NM_001278724, intron 1 of 5) intron (NM_001278724, intron 1 of 5) 17980 NM_001278722 53832 Hs.445868 NM_014432 ENSG00000016402 IL20RA CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA interleukin 20 receptor subunit alpha protein-coding chr12-6457 chr12 93602803 93603013 + 7.07 0.000 Intergenic Intergenic 30233 NM_001270471 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr5-7740 chr5 60076581 60076791 + 7.07 0.000 intron (NM_001349243, intron 2 of 16) L1PREC2|LINE|L1 -182960 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr12-2749 chr12 43513969 43514179 + 7.07 0.000 intron (NM_025003, intron 3 of 38) intron (NM_025003, intron 3 of 38) 38129 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr17-8046 chr17 50767021 50767231 + 7.07 0.000 intron (NM_001358683, intron 1 of 3) MIRc|SINE|MIR 392 NM_001358683 55018 Hs.389460 NM_017928 ENSG00000167117 ANKRD40CL C17orf73|LINC00483 ANKRD40 C-terminal like protein-coding chr18-2243 chr18 69861855 69862065 + 7.07 0.000 3' UTR (NM_001303619, exon 5 of 5) 3' UTR (NM_001303619, exon 5 of 5) 85913 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr8-4142 chr8 75044703 75044913 + 7.07 0.000 Intergenic HERVK9-int|LTR|ERVK 44653 NM_001286778 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr21-1208 chr21 44536816 44537026 + 7.07 0.000 intron (NM_144991, intron 2 of 11) L1M5|LINE|L1 3274 NM_198691 386677 Hs.688631 NM_198691 ENSG00000215455 KRTAP10-1 KAP10.1|KAP18-1|KAP18.1|KRTAP10.1|KRTAP18-1|KRTAP18.1 keratin associated protein 10-1 protein-coding chrX-1992 chrX 13008245 13008455 + 7.07 0.000 Intergenic Intergenic 33240 NM_021109 7114 Hs.437277 NM_021109 ENSG00000205542 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4 X-linked protein-coding chr15-2596 chr15 62770376 62770586 + 7.07 0.000 intron (NM_015059, intron 38 of 55) intron (NM_015059, intron 38 of 55) -53476 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr6-6167 chr6 4744221 4744431 + 7.07 0.000 intron (NM_001368125, intron 3 of 8) AluJr|SINE|Alu -32078 NM_001368126 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr9-5152 chr9 38095329 38095539 + 7.07 0.000 Intergenic MSTB|LTR|ERVL-MaLR -26207 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr4-7965 chr4 112331981 112332191 + 7.07 0.000 intron (NM_001102406, intron 2 of 15) ERVL-E-int|LTR|ERVL 34717 NM_001102406 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr4-7718 chr4 89597792 89598002 + 7.07 0.000 Intergenic MIR3|SINE|MIR -238504 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr16-6186 chr16 26459538 26459748 + 7.07 0.000 Intergenic MER21A|LTR|ERVL 434406 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr6-6630 chr6 152161642 152161852 + 7.07 0.000 intron (NM_182961, intron 131 of 145) HAL1|LINE|L1 6540 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr8-6577 chr8 70217057 70217267 + 7.07 0.000 intron (NM_001321711, intron 2 of 21) intron (NM_001321711, intron 2 of 21) -145910 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr1-12116 chr1 163265985 163266195 + 7.07 0.000 intron (NM_001254748, intron 2 of 5) L2c|LINE|L2 55701 NM_001254748 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr6-6243 chr6 27034638 27034848 + 7.07 0.000 Intergenic Intergenic -14437 NR_026776 100270746 Hs.590428 NR_026776 LOC100270746 - uncharacterized LOC100270746 ncRNA chr7-6943 chr7 92752445 92752655 + 7.07 0.000 intron (NM_001259, intron 3 of 7) intron (NM_001259, intron 3 of 7) 81409 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chrX-5263 chrX 138788269 138788479 + 7.07 0.000 intron (NM_001139498, intron 2 of 5) MLT1A0-int|LTR|ERVL-MaLR -49021 NM_033642 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr9-3776 chr9 126109801 126110011 + 7.07 0.000 Intergenic Intergenic 166009 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr15-4200 chr15 25264166 25264376 + 7.07 0.000 promoter-TSS (NR_003498) promoter-TSS (NR_003498) -256 NR_003498 100036566 NR_003498 SNORD115-45 HBII-52-45|SNORD115-48 small nucleolar RNA, C/D box 115-45 snoRNA chr17-7792 chr17 39807261 39807471 + 7.07 0.000 intron (NM_001257409, intron 2 of 5) L1MB7|LINE|L1 -29141 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr1-16675 chr1 244217409 244217619 + 7.07 0.000 Intergenic Intergenic -135121 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr3-8839 chr3 9088263 9088473 + 7.07 0.000 intron (NM_014850, intron 3 of 21) intron (NM_014850, intron 3 of 21) -104125 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr3-4042 chr3 73409563 73409773 + 7.07 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) 24327 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr4-8016 chr4 117417710 117417920 + 7.07 0.000 Intergenic L2c|LINE|L2 -10583 NR_125757 103689918 Hs.582062 NR_125757 LINC01378 - long intergenic non-protein coding RNA 1378 ncRNA chrX-4494 chrX 64919991 64920201 + 7.07 0.000 exon (NM_001178032, exon 3 of 5) exon (NM_001178032, exon 3 of 5) 56354 NR_045044 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr11-7998 chr11 12252324 12252534 + 7.07 0.000 intron (NM_001282666, intron 16 of 18) intron (NM_001282666, intron 16 of 18) -34471 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr5-8025 chr5 89077774 89077984 + 7.07 0.000 intron (NR_136221, intron 3 of 6) intron (NR_136221, intron 3 of 6) -173774 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr1-14726 chr1 65719121 65719331 + 7.07 0.000 Intergenic L1M1|LINE|L1 -73284 NM_001297440 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr6-5946 chr6 75664096 75664306 + 7.07 0.000 intron (NM_001100409, intron 8 of 22) FLAM_A|SINE|Alu 62321 NM_015571 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding chrX-2074 chrX 20433522 20433732 + 7.07 0.000 Intergenic Intergenic -166718 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr17-5604 chr17 48225744 48225954 + 7.07 0.000 intron (NM_001075099, intron 4 of 12) (GAGTTAA)n|Simple_repeat|Simple_repeat -68498 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr1-13148 chr1 202010019 202010229 + 7.07 0.000 promoter-TSS (NM_004433) promoter-TSS (NM_004433) 229 NR_146472 102723465 Hs.661033 NR_146472 ELF3-AS1 SCAT7 ELF3 antisense RNA 1 ncRNA chr16-5041 chr16 59246544 59246754 + 7.07 0.000 Intergenic Intergenic 508542 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr5-3041 chr5 17106050 17106260 + 7.07 0.000 Intergenic Intergenic 49837 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr9-5969 chr9 134308917 134309127 + 7.07 0.000 Intergenic Intergenic -13625 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr8-6320 chr8 47413178 47413388 + 7.07 0.000 intron (NM_001080394, intron 7 of 19) MIR3|SINE|MIR 152345 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr15-2802 chr15 37492363 37492573 + 7.07 0.000 Intergenic Intergenic -391157 NM_001220482 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr8-5163 chr8 90917879 90918089 + 7.07 0.000 intron (NM_022351, intron 6 of 12) (TA)n|Simple_repeat|Simple_repeat 67093 NM_001363275 100127983 Hs.733266 NM_001190972 ENSG00000253250 C8orf88 - chromosome 8 open reading frame 88 protein-coding chrX-2772 chrX 130616754 130616964 + 7.07 0.000 Intergenic Intergenic 121918 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr2-6496 chr2 177785152 177785362 + 7.07 0.000 intron (NM_001077197, intron 10 of 20) MLT1I|LTR|ERVL-MaLR 103499 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr10-4612 chr10 116807780 116807990 + 7.07 0.000 intron (NM_001330164, intron 2 of 12) intron (NM_001330164, intron 2 of 12) 19683 NR_162126 113218494 NR_162126 MIR9851 - microRNA 9851 ncRNA chr7-7994 chr7 16046239 16046449 + 7.07 0.000 Intergenic Intergenic -164142 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr11-7749 chr11 76560545 76560755 + 7.07 0.000 Intergenic Intergenic 109288 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr13-4315 chr13 100507232 100507442 + 7.07 0.000 intron (NR_148027, intron 22 of 23) intron (NR_148027, intron 22 of 23) -26322 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr6-6644 chr6 156479931 156480141 + 7.07 0.000 Intergenic L1ME3Cz|LINE|L1 101286 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr2-13879 chr2 179607188 179607398 + 7.07 0.000 intron (NR_148056, intron 3 of 9) THE1D|LTR|ERVL-MaLR -21387 NR_104234 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr15-4278 chr15 36960400 36960610 + 7.07 0.000 intron (NM_172316, intron 8 of 12) intron (NM_172316, intron 8 of 12) 12396 NR_107030 102466875 NR_107030 ENSG00000277202 MIR8063 hsa-mir-8063 microRNA 8063 ncRNA chr16-5757 chr16 86833140 86833350 + 7.07 0.000 Intergenic Intergenic 111154 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr12-5347 chr12 116878672 116878882 + 7.07 0.000 intron (NR_073189, intron 1 of 4) CpG 2664 NR_073189 8739 Hs.26605 NM_003806 ENSG00000135116 HRK DP5|HARAKIRI harakiri, BCL2 interacting protein protein-coding chr12-4560 chr12 28349487 28349697 + 7.07 0.000 intron (NM_001352084, intron 6 of 11) MER45A|DNA|hAT-Tip100 -158854 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr9-6104 chr9 137799054 137799264 + 7.07 0.000 intron (NM_001354263, intron 17 of 26) intron (NM_001354263, intron 17 of 26) -10753 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr1-13300 chr1 234068379 234068589 + 7.07 0.000 intron (NM_173508, intron 2 of 7) AluSc8|SINE|Alu -145727 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr4-5806 chr4 85241372 85241582 + 7.07 0.000 Intergenic AluSc5|SINE|Alu -233673 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr5-7890 chr5 75187379 75187589 + 7.07 0.000 intron (NM_001164443, intron 10 of 24) intron (NM_001164443, intron 10 of 24) 49394 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr2-7095 chr2 174606397 174606607 + 7.07 0.000 intron (NM_001077269, intron 1 of 7) L2c|LINE|L2 28103 NM_003387 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr3-11110 chr3 186093024 186093234 + 7.07 0.000 intron (NM_004454, intron 5 of 12) intron (NM_004454, intron 5 of 12) 15960 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr1-11051 chr1 224248986 224249196 + 7.07 0.000 intron (NM_002533, intron 19 of 22) HAL1b|LINE|L1 8019 NR_031574 100313769 NR_031574 ENSG00000221406 MIR320B2 MIR320B-2|MIRN320B2|mir-320b-2 microRNA 320b-2 ncRNA chr4-4465 chr4 55032496 55032706 + 7.07 0.000 Intergenic MIRb|SINE|MIR 92994 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chrX-2925 chrX 153056078 153056288 + 7.07 0.000 promoter-TSS (NM_001282535) promoter-TSS (NM_001282535) -287 NM_013364 29944 Hs.449627 NM_013364 ENSG00000183837 PNMA3 MA3|MA5 PNMA family member 3 protein-coding chr4-6653 chr4 2167787 2167997 + 7.07 0.000 intron (NM_181808, intron 13 of 25) AluSq2|SINE|Alu 74229 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr4-4533 chr4 68077240 68077450 + 7.07 0.000 intron (NM_207407, intron 3 of 9) intron (NM_207407, intron 3 of 9) -14048 NR_027094 401135 Hs.130270 NM_001014372 SYT14P1 CHR415SYT|SYT14L|SYTDEP synaptotagmin 14 pseudogene 1 pseudo chr12-5222 chr12 107225745 107225955 + 7.07 0.000 Intergenic Intergenic -92584 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr1-11636 chr1 244292949 244293159 + 7.07 0.000 Intergenic L1MB7|LINE|L1 -59581 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr16-4472 chr16 56549828 56550038 + 7.07 0.000 Intergenic MER102c|DNA|hAT-Charlie -15140 NM_032935 84560 Hs.567624 NM_032935 ENSG00000102891 MT4 MT-4|MT-IV|MTIV metallothionein 4 protein-coding chr8-7001 chr8 108852738 108852948 + 7.07 0.000 Intergenic Intergenic -65249 NR_136411 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr1-11558 chr1 183062816 183063026 + 7.07 0.000 intron (NM_002293, intron 1 of 27) AluSz6|SINE|Alu 39501 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr2-4310 chr2 235642470 235642680 + 7.07 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -124654 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr5-5188 chr5 111758056 111758266 + 7.07 0.000 promoter-TSS (NM_001142482) promoter-TSS (NM_001142482) 57 NM_001142476 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr9-6742 chr9 15100812 15101022 + 7.07 0.000 Intergenic MER5B|DNA|hAT-Charlie 107590 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr16-6012 chr16 8716724 8716934 + 7.07 0.000 intron (NM_000663, intron 1 of 15) intron (NM_000663, intron 1 of 15) 3860 NM_000663 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr1-10196 chr1 112502814 112503024 + 7.07 0.000 intron (NM_004185, intron 2 of 5) intron (NM_004185, intron 2 of 5) -6046 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr11-5267 chr11 34137350 34137560 + 7.07 0.000 intron (NM_001144030, intron 19 of 26) L2|LINE|L2 31826 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr15-5057 chr15 85007578 85007788 + 7.07 0.000 intron (NM_173454, intron 1 of 20) MIR|SINE|MIR 25709 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr10-7827 chr10 43913918 43914128 + 7.07 0.000 non-coding (NR_136148, exon 2 of 2) non-coding (NR_136148, exon 2 of 2) 1621 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr4-7869 chr4 103753246 103753456 + 7.07 0.000 Intergenic HERVL18-int|LTR|ERVL -33366 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr13-4269 chr13 97723681 97723891 + 7.07 0.000 Intergenic Intergenic -229889 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr7-7566 chr7 120687782 120687992 + 7.07 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 170257 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr22-2486 chr22 21760807 21761017 + 7.07 0.000 3' UTR (NM_002745, exon 9 of 9) 3' UTR (NM_002745, exon 9 of 9) -25118 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr1-13627 chr1 10123271 10123481 + 7.07 0.000 intron (NM_006048, intron 9 of 26) AluSx1|SINE|Alu -87194 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr14-2436 chr14 73475068 73475278 + 7.07 0.000 Intergenic Intergenic -11531 NR_135251 101928143 Hs.654609 NR_135251 ENSG00000284930 LOC101928143 - uncharacterized LOC101928143 ncRNA chr9-3926 chr9 135087421 135087631 + 7.07 0.000 promoter-TSS (NM_001282611) promoter-TSS (NM_001282611) -142 NM_001282611 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr1-12978 chr1 155038608 155038818 + 7.07 0.000 intron (NM_152494, intron 4 of 16) L2c|LINE|L2 4907 NM_001143687 149095 Hs.567717 NM_152494 ENSG00000163357 DCST1 - DC-STAMP domain containing 1 protein-coding chr2-12875 chr2 97889922 97890132 + 7.07 0.000 intron (NM_015348, intron 3 of 40) L2a|LINE|L2 105921 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr10-7465 chr10 8695739 8695949 + 7.07 0.000 Intergenic AluJo|SINE|Alu -101453 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 - uncharacterized LOC105376398 ncRNA chr4-7758 chr4 94140151 94140361 + 7.07 0.000 intron (NR_125922, intron 5 of 8) L1M2|LINE|L1 67300 NR_125922 101929210 Hs.518877 NR_125922 ENSG00000246541 LOC101929210 - uncharacterized LOC101929210 ncRNA chr15-3351 chr15 82715163 82715373 + 7.07 0.000 Intergenic Intergenic -1275 NR_034139 338963 Hs.254464 NR_034139 ENSG00000228141 LOC338963 - epididymal protein pseudogene pseudo chr5-4837 chr5 61812161 61812371 + 7.07 0.000 Intergenic Intergenic -76568 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr15-3780 chr15 67989270 67989480 + 7.07 0.000 Intergenic LTR16E1|LTR|ERVL -64804 NM_016166 8554 Hs.162458 NM_016166 ENSG00000033800 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT 1 protein-coding chr4-8183 chr4 131819798 131820008 + 7.07 0.000 Intergenic L1PB3|LINE|L1 55065 NR_125884 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr13-2570 chr13 67915366 67915576 + 7.07 0.000 Intergenic SATR1|Satellite|Satellite 543084 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr17-7072 chr17 65698706 65698916 + 7.07 0.000 intron (NR_126542, intron 2 of 5) intron (NR_126542, intron 2 of 5) 127640 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr16-2033 chr16 29729283 29729493 + 7.07 0.000 Intergenic MER20|DNA|hAT-Charlie 16602 NM_175900 283897 Hs.331095 NM_175900 ENSG00000185905 C16orf54 - chromosome 16 open reading frame 54 protein-coding chr5-8481 chr5 132772246 132772456 + 7.07 0.000 intron (NM_001098813, intron 1 of 9) intron (NM_001098813, intron 1 of 9) 4888 NM_001098812 23176 Hs.522057 NM_015146 ENSG00000164402 SEPTIN8 SEP2|SEPT8 septin 8 protein-coding chr14-3980 chr14 32709077 32709287 + 7.07 0.000 intron (NM_004274, intron 9 of 13) intron (NM_004274, intron 9 of 13) -229697 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr7-6957 chr7 99529853 99530063 + 7.07 0.000 intron (NM_145102, intron 6 of 6) AluSg7|SINE|Alu 22156 NM_145111 221786 Hs.596587 NM_145111 ENSG00000221909 FAM200A C7orf38 family with sequence similarity 200 member A protein-coding chrX-2776 chrX 130997613 130997823 + 7.07 0.000 Intergenic X6A_LINE|LINE|CR1 60428 NR_126350 104266960 Hs.573575 NR_126350 ENSG00000228659 LINC01201 TCONS_00017091 long intergenic non-protein coding RNA 1201 ncRNA chr5-4426 chr5 1183336 1183546 + 7.07 0.000 Intergenic Intergenic -4836 NR_109911 101928857 Hs.593732 NR_109911 ENSG00000249201 CTD-3080P12.3 - uncharacterized LOC101928857 ncRNA chr1-15157 chr1 106664770 106664980 + 7.07 0.000 Intergenic AluSx3|SINE|Alu -153364 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr2-8548 chr2 133365439 133365649 + 7.07 0.000 intron (NM_207481, intron 3 of 17) (AC)n|Simple_repeat|Simple_repeat 99349 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chrX-3659 chrX 101259876 101260086 + 7.07 0.000 intron (NM_001939, intron 22 of 23) intron (NM_001939, intron 22 of 23) 31353 NM_001168474 54457 Hs.223806 NM_024885 ENSG00000102387 TAF7L CT40|TAF2Q TATA-box binding protein associated factor 7 like protein-coding chr22-3386 chr22 32375895 32376105 + 7.07 0.000 promoter-TSS (NR_038918) promoter-TSS (NR_038918) -664 NR_038918 339666 Hs.654761 NR_038918 ENSG00000230736 LOC339666 - uncharacterized LOC339666 ncRNA chr1-11158 chr1 237193374 237193584 + 7.07 0.000 intron (NM_001035, intron 1 of 104) intron (NM_001035, intron 1 of 104) 151295 NM_001035 6262 Hs.109514 NM_001035 ENSG00000198626 RYR2 ARVC2|ARVD2|RYR-2|RyR|VTSIP ryanodine receptor 2 protein-coding chr14-4423 chr14 31968132 31968342 + 7.07 0.000 Intergenic Intergenic 23384 NR_146544 105370439 NR_146544 ENSG00000258474 LINC02313 - long intergenic non-protein coding RNA 2313 ncRNA chr3-9688 chr3 64898221 64898431 + 7.07 0.000 intron (NR_038264, intron 4 of 5) MLT1J|LTR|ERVL-MaLR -210326 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr11-9597 chr11 65324018 65324228 + 7.07 0.000 Intergenic Intergenic 9257 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr6-8538 chr6 161140153 161140363 + 7.07 0.000 intron (NM_020133, intron 7 of 8) intron (NM_020133, intron 7 of 8) 21724 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr11-6961 chr11 113918284 113918494 + 7.07 0.000 intron (NM_006028, intron 2 of 8) L1MD2|LINE|L1 9548 NM_001363563 9177 Hs.241377 NM_006028 ENSG00000149305 HTR3B 5-HT3B 5-hydroxytryptamine receptor 3B protein-coding chr6-6068 chr6 138876103 138876313 + 7.07 0.000 intron (NM_001077706, intron 13 of 21) intron (NM_001077706, intron 13 of 21) 80097 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr6-5383 chr6 152108495 152108705 + 7.07 0.000 intron (NM_001328100, intron 6 of 6) intron (NM_001328100, intron 6 of 6) 59687 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr3-9898 chr3 84042538 84042748 + 7.07 0.000 Intergenic Intergenic 826932 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr8-5840 chr8 6071909 6072119 + 7.07 0.000 Intergenic Intergenic 334534 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr8-7289 chr8 131381227 131381437 + 7.07 0.000 Intergenic AluSx1|SINE|Alu -340423 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr10-3082 chr10 10741537 10741747 + 7.07 0.000 intron (NM_001326317, intron 2 of 14) L1MC4a|LINE|L1 53272 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo chr8-4087 chr8 68033642 68033852 + 7.07 0.000 intron (NM_024870, intron 6 of 39) intron (NM_024870, intron 6 of 39) 81701 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr2-8113 chr2 79085828 79086038 + 7.07 0.000 intron (NM_006507, intron 4 of 5) intron (NM_006507, intron 4 of 5) 2060 NM_006507 5968 Hs.4158 NM_006507 ENSG00000172023 REG1B PSPS2|REGH|REGI-BETA|REGL regenerating family member 1 beta protein-coding chr2-14068 chr2 197931975 197932185 + 7.07 0.000 intron (NM_006226, intron 1 of 5) intron (NM_006226, intron 1 of 5) 127487 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr21-1406 chr21 46280705 46280915 + 7.07 0.000 intron (NM_003906, intron 2 of 27) intron (NM_003906, intron 2 of 27) 4801 NM_003906 8888 Hs.389037 NM_003906 ENSG00000160294 MCM3AP GANP|MAP80|PNRIID|SAC3 minichromosome maintenance complex component 3 associated protein protein-coding chr13-1845 chr13 105020702 105020912 + 7.07 0.000 Intergenic L1MD3|LINE|L1 -445060 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr8-4073 chr8 66366536 66366746 + 7.07 0.000 Intergenic L2a|LINE|L2 62336 NR_040434 100505676 Hs.121613 NM_001242759 ENSG00000246145 RRS1-AS1 - RRS1 antisense RNA 1 (head to head) ncRNA chr1-14943 chr1 86597695 86597905 + 7.07 0.000 intron (NR_135837, intron 4 of 4) MLT1K|LTR|ERVL-MaLR -36476 NR_024604 9629 Hs.673847 NM_004921 ENSG00000153923 CLCA3P CLCA3 chloride channel accessory 3, pseudogene pseudo chr12-6395 chr12 71840250 71840460 + 7.07 0.000 intron (NR_027449, intron 1 of 15) intron (NR_027449, intron 1 of 15) 596 NM_001146214 64786 Hs.284630 NM_022771 ENSG00000121749 TBC1D15 RAB7-GAP TBC1 domain family member 15 protein-coding chr15-2954 chr15 48882402 48882612 + 7.07 0.000 intron (NM_203349, intron 4 of 11) intron (NM_203349, intron 4 of 11) 4373 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chr4-4136 chr4 7607567 7607777 + 7.07 0.000 intron (NM_020777, intron 3 of 26) MIRb|SINE|MIR -146418 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr5-8136 chr5 99568963 99569173 + 7.07 0.000 intron (NR_110562, intron 3 of 3) MER1B|DNA|hAT-Charlie 35078 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr11-6365 chr11 64292717 64292927 + 7.07 0.000 intron (NM_001317090, intron 1 of 6) intron (NM_001317090, intron 1 of 6) 824 NM_001317090 50801 Hs.647233 NM_016611 ENSG00000182450 KCNK4 FHEIG|K2p4.1|TRAAK|TRAAK1 potassium two pore domain channel subfamily K member 4 protein-coding chr18-1190 chr18 26549436 26549646 + 7.07 0.000 promoter-TSS (NM_001136205) promoter-TSS (NM_001136205) -106 NM_001136205 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr12-3043 chr12 3993970 3994180 + 7.07 0.000 Intergenic Intergenic -120627 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr1-14204 chr1 34610920 34611130 + 7.07 0.000 Intergenic X7A_LINE|LINE|CR1 58669 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr14-3794 chr14 62116788 62116998 + 7.07 0.000 promoter-TSS (NR_015358) promoter-TSS (NR_015358) -464 NR_015358 646113 Hs.445241 NM_001039785 LINC00643 - long intergenic non-protein coding RNA 643 ncRNA chr3-6220 chr3 64848934 64849144 + 7.07 0.000 intron (NR_038264, intron 3 of 5) intron (NR_038264, intron 3 of 5) -161039 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr1-13928 chr1 22826747 22826957 + 7.07 0.000 intron (NM_004442, intron 3 of 15) L2b|LINE|L2 36374 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr20-1665 chr20 32893727 32893937 + 7.07 0.000 intron (NM_001143967, intron 9 of 26) MIRb|SINE|MIR 34909 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr10-7298 chr10 132119952 132120162 + 7.07 0.000 intron (NM_001323089, intron 3 of 22) intron (NM_001323089, intron 3 of 22) 54111 NM_001323087 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr20-2504 chr20 33887585 33887795 + 7.07 0.000 Intergenic AluSx1|SINE|Alu 76342 NM_176812 128866 Hs.472471 NM_176812 ENSG00000101421 CHMP4B C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4 charged multivesicular body protein 4B protein-coding chr2-14578 chr2 231745246 231745456 + 7.07 0.000 intron (NM_002601, intron 1 of 4) intron (NM_002601, intron 1 of 4) 32037 NR_036052 100302285 NR_036052 ENSG00000284378 MIR1244-1 MIR1244|MIRN1244|hsa-mir-1244|hsa-mir-1244-1 microRNA 1244-1 ncRNA chr1-14586 chr1 53614823 53615033 + 7.07 0.000 intron (NM_001367484, intron 2 of 10) (CA)n|Simple_repeat|Simple_repeat 119276 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr11-9353 chr11 47083975 47084185 + 7.07 0.000 intron (NM_001003677, intron 3 of 8) L1ME1|LINE|L1 92799 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr8-7158 chr8 122843042 122843252 + 7.07 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 61492 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr1-15349 chr1 146018796 146019006 + 7.07 0.000 intron (NM_213652, intron 1 of 1) intron (NM_213652, intron 1 of 1) 2834 NM_213652 148738 Hs.632436 NM_145277 ENSG00000168509 HJV HFE2|HFE2A|JH|RGMC hemojuvelin BMP co-receptor protein-coding chr2-8059 chr2 72938592 72938802 + 7.07 0.000 Intergenic Intergenic 21178 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr4-8632 chr4 174158882 174159092 + 7.07 0.000 intron (NR_125896, intron 1 of 4) intron (NR_125896, intron 1 of 4) 61411 NR_125896 101928509 Hs.147719 NR_125896 ENSG00000248174 LINC02268 - long intergenic non-protein coding RNA 2268 ncRNA chr7-8102 chr7 25950618 25950828 + 7.07 0.000 promoter-TSS (NR_029597) promoter-TSS (NR_029597) -737 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr9-8526 chr9 126152382 126152592 + 7.07 0.000 Intergenic Intergenic 123428 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr1-14642 chr1 57708652 57708862 + 7.07 0.000 intron (NM_001353980, intron 3 of 5) L1M1|LINE|L1 -151824 NR_104362 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr18-1016 chr18 57563438 57563648 + 7.07 0.000 intron (NM_001371095, intron 6 of 11) AluSp|SINE|Alu 23159 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr8-7000 chr8 108747205 108747415 + 7.07 0.000 intron (NR_136411, intron 1 of 3) intron (NR_136411, intron 1 of 3) 40284 NM_153015 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr10-7275 chr10 129210858 129211068 + 7.07 0.000 Intergenic Intergenic -256278 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr4-6222 chr4 57820155 57820365 + 7.07 0.000 Intergenic Intergenic 394388 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr17-8121 chr17 57751541 57751751 + 7.07 0.000 Intergenic Intergenic -6347 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr7-8821 chr7 84698186 84698396 + 7.07 0.000 Intergenic MER5A|DNA|hAT-Charlie 165815 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr4-5141 chr4 153166580 153166790 + 7.07 0.000 intron (NM_001130067, intron 1 of 11) AluJo|SINE|Alu 13607 NM_001130067 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr1-10855 chr1 204630620 204630830 + 7.07 0.000 intron (NM_201630, intron 1 of 1) intron (NM_201630, intron 1 of 1) 55013 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr8-6147 chr8 30596414 30596624 + 7.07 0.000 intron (NM_001348353, intron 6 of 6) L1MEc|LINE|L1 -42061 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr22-3515 chr22 49900483 49900693 + 7.07 0.000 3' UTR (NM_024105, exon 10 of 10) 3' UTR (NM_024105, exon 10 of 10) 17850 NM_024105 79087 Hs.526711 NM_024105 ENSG00000182858 ALG12 CDG1G|ECM39|PP14673|hALG12 ALG12 alpha-1,6-mannosyltransferase protein-coding chr7-6076 chr7 115217504 115217714 + 7.07 0.000 intron (NR_126407, intron 1 of 4) intron (NR_126407, intron 1 of 4) 13746 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr18-2467 chr18 42639092 42639302 + 7.07 0.000 intron (NR_046174, intron 7 of 9) intron (NR_046174, intron 7 of 9) 452529 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr8-7396 chr8 139551681 139551891 + 7.07 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 151337 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr2-9050 chr2 200087056 200087266 + 7.07 0.000 Intergenic L2c|LINE|L2 -131670 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr7-7148 chr7 4099898 4100108 + 7.07 0.000 intron (NM_152744, intron 22 of 44) intron (NM_152744, intron 22 of 44) -29682 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr20-1626 chr20 17332228 17332438 + 7.07 0.000 intron (NM_002594, intron 2 of 11) intron (NM_002594, intron 2 of 11) 105293 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr17-7281 chr17 3713903 3714113 + 7.07 0.000 TTS (NM_002208) TTS (NM_002208) -9895 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr9-6933 chr9 96208144 96208354 + 7.07 0.000 Intergenic Intergenic -38214 NR_146524 105376162 Hs.662614 NR_146524 ENSG00000232283 HSD17B3-AS1 - HSD17B3 antisense RNA 1 ncRNA chr12-3913 chr12 128994847 128995057 + 7.07 0.000 Intergenic MER41B|LTR|ERV1 -114738 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 TMEM132D-AS1 - TMEM132D antisense RNA 1 ncRNA chr1-8696 chr1 224811089 224811299 + 7.07 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -118460 NM_144989 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr14-3325 chr14 88742138 88742348 + 7.07 0.000 intron (NM_183387, intron 4 of 42) MER3|DNA|hAT-Charlie 50710 NM_183387 161436 Hs.325846 NM_183387 ENSG00000165521 EML5 EMAP-2|EMAP-5 EMAP like 5 protein-coding chr1-14244 chr1 36587848 36588058 + 7.07 0.000 Intergenic Intergenic -104639 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr6-5445 chr6 158264641 158264851 + 7.07 0.000 Intergenic Intergenic -47719 NM_001007466 56995 Hs.486993 NM_020245 ENSG00000130338 TULP4 TUSP TUB like protein 4 protein-coding chrX-2185 chrX 39498698 39498908 + 7.07 0.000 Intergenic L1MC4|LINE|L1 -107029 NR_110385 101927449 Hs.553988 NR_110385 ENSG00000236747 LINC01282 - long intergenic non-protein coding RNA 1282 ncRNA chr5-6608 chr5 36171323 36171533 + 7.07 0.000 intron (NM_032637, intron 6 of 9) intron (NM_032637, intron 6 of 9) 19317 NM_032637 6502 Hs.23348 NM_005983 ENSG00000145604 SKP2 FBL1|FBXL1|FLB1|p45 S-phase kinase associated protein 2 protein-coding chr1-10463 chr1 161473433 161473643 + 7.07 0.000 Intergenic HERV9NC-int|LTR|ERV1 -31919 NM_001136219 2212 Hs.352642 NM_021642 ENSG00000143226 FCGR2A CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2 Fc fragment of IgG receptor IIa protein-coding chr22-3469 chr22 43351818 43352028 + 7.07 0.000 Intergenic L2a|LINE|L2 -8551 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr9-4961 chr9 17216676 17216886 + 7.07 0.000 intron (NM_001365029, intron 2 of 25) intron (NM_001365029, intron 2 of 25) 81741 NM_017738 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr14-1939 chr14 23562881 23563091 + 7.07 0.000 intron (NM_001354675, intron 11 of 18) intron (NM_001354675, intron 11 of 18) 1889 NR_110555 102724814 Hs.569375 NR_110555 ENSG00000258727 LOC102724814 - uncharacterized LOC102724814 ncRNA chr6-8156 chr6 131097312 131097522 + 7.07 0.000 Intergenic L1PA13|LINE|L1 -34095 NM_001350320 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr1-5503 chr1 163173155 163173365 + 7.07 0.000 intron (NM_001254748, intron 2 of 5) intron (NM_001254748, intron 2 of 5) 11585 NR_110699 101928404 Hs.683933 NR_110699 ENSG00000232892 LOC101928404 - uncharacterized LOC101928404 ncRNA chr5-5589 chr5 150198315 150198525 + 7.07 0.000 intron (NM_014228, intron 4 of 13) intron (NM_014228, intron 4 of 13) 8358 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr4-8553 chr4 165626057 165626267 + 7.07 0.000 Intergenic Intergenic -58477 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr1-12609 chr1 36670859 36671069 + 7.07 0.000 Intergenic Intergenic -187650 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr3-7568 chr3 197986513 197986723 + 7.07 0.000 intron (NR_026786, intron 8 of 16) intron (NR_026786, intron 8 of 16) 26401 NR_026786 89782 Hs.518540 NM_033029 ENSG00000185621 LMLN GP63|INV|IX14|LMNL1|MSP leishmanolysin like peptidase protein-coding chr13-2337 chr13 34017296 34017506 + 7.07 0.000 Intergenic L1MEd|LINE|L1 199252 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr5-6482 chr5 176902414 176902624 + 7.07 0.000 Intergenic LTR16C|LTR|ERVL -3173 NM_002115 3101 Hs.411695 NM_002115 ENSG00000160883 HK3 HKIII|HXK3 hexokinase 3 protein-coding chr14-4901 chr14 72699844 72700054 + 7.07 0.000 intron (NM_001280544, intron 6 of 9) intron (NM_001280544, intron 6 of 9) 183129 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr8-5960 chr8 20624811 20625021 + 7.07 0.000 Intergenic AluSx|SINE|Alu -9990 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr13-3910 chr13 55314193 55314403 + 7.07 0.000 Intergenic Intergenic 139844 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr19-4617 chr19 13327218 13327428 + 7.07 0.000 intron (NM_023035, intron 10 of 46) intron (NM_023035, intron 10 of 46) 176912 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr1-10455 chr1 160831574 160831784 + 7.07 0.000 intron (NM_001166664, intron 7 of 7) intron (NM_001166664, intron 7 of 7) 31208 NM_001166663 51744 Hs.157872 NM_016382 ENSG00000122223 CD244 2B4|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 molecule protein-coding chr9-7521 chr9 33445098 33445308 + 7.07 0.000 intron (NM_001318144, intron 1 of 4) MamRep38|DNA|hAT 2390 NM_004925 360 Hs.234642 NM_004925 ENSG00000165272 AQP3 AQP-3|GIL aquaporin 3 (Gill blood group) protein-coding chr4-5712 chr4 36312541 36312751 + 7.07 0.000 intron (NM_001170700, intron 7 of 9) L2a|LINE|L2 31030 NR_160267 401124 Hs.363407 NM_001136536 ENSG00000197057 DTHD1 - death domain containing 1 protein-coding chr9-7741 chr9 74984969 74985179 + 7.07 0.000 intron (NR_135282, intron 5 of 6) intron (NR_135282, intron 5 of 6) 32109 NR_121183 101927380 Hs.257556 NR_121183 CARNMT1-AS1 C9orf41-AS1 CARNMT1 antisense RNA 1 ncRNA chr7-8800 chr7 82873378 82873588 + 7.07 0.000 intron (NM_033026, intron 10 of 24) L2|LINE|L2 289401 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr6-5090 chr6 118693501 118693711 + 7.07 0.000 intron (NM_001178035, intron 1 of 13) MLT1N2|LTR|ERVL-MaLR 16469 NM_001178035 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr3-8206 chr3 45354326 45354536 + 7.07 0.000 Intergenic AluJo|SINE|Alu -34145 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr1-10329 chr1 152417300 152417510 + 7.07 0.000 Intergenic Intergenic -3142 NM_016190 49860 Hs.242057 NM_016190 ENSG00000143536 CRNN C1orf10|DRC1|PDRC1|SEP53 cornulin protein-coding chr3-6528 chr3 116863817 116864027 + 7.07 0.000 Intergenic Intergenic -13555 NR_039649 100616485 NR_039649 ENSG00000265433 MIR4447 - microRNA 4447 ncRNA chr19-6863 chr19 44234056 44234266 + 7.07 0.000 intron (NM_182490, intron 5 of 5) intron (NM_182490, intron 5 of 5) 21629 NM_182490 7770 Hs.298089 NM_182490 ENSG00000131115 ZNF227 - zinc finger protein 227 protein-coding chr7-8227 chr7 33750143 33750353 + 7.07 0.000 Intergenic L1PA16|LINE|L1 -154667 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr11-3156 chr11 59473196 59473406 + 7.07 0.000 Intergenic Intergenic -4129 NM_001004705 390197 Hs.553756 NM_001004705 ENSG00000254466 OR4D10 OR11-251|OR4D10P|OST711 olfactory receptor family 4 subfamily D member 10 protein-coding chr3-7954 chr3 161199593 161199803 + 7.07 0.000 Intergenic MER4A1|LTR|ERV1 -21592 NM_015938 51068 Hs.598836 NM_015938 ENSG00000169251 NMD3 CGI-07 NMD3 ribosome export adaptor protein-coding chr16-6834 chr16 81701512 81701722 + 7.07 0.000 intron (NM_030629, intron 15 of 20) intron (NM_030629, intron 15 of 20) 36263 NR_045112 100129617 Hs.657151 NR_045112 LOC100129617 - uncharacterized LOC100129617 ncRNA chr9-7385 chr9 18256831 18257041 + 7.07 0.000 Intergenic Intergenic -217217 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr20-3418 chr20 44090686 44090896 + 7.07 0.000 Intergenic Intergenic 96397 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr1-3821 chr1 21870696 21870906 + 7.07 0.000 intron (NM_005529, intron 33 of 96) (CACCA)n|Simple_repeat|Simple_repeat 58536 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr4-6567 chr4 185479794 185480004 + 7.07 0.000 Intergenic Intergenic -8166 NM_001145411 256309 Hs.41101 NM_152775 ENSG00000168491 CCDC110 CT52|KM-HN-1|KMHN1 coiled-coil domain containing 110 protein-coding chr18-2216 chr18 65108415 65108625 + 7.07 0.000 Intergenic L2a|LINE|L2 -641732 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr1-9534 chr1 39564604 39564814 + 7.07 0.000 promoter-TSS (NR_125979) promoter-TSS (NR_125979) -361 NR_125979 101929516 Hs.662694 NR_125979 ENSG00000228060 PABPC4-AS1 - PABPC4 antisense RNA 1 ncRNA chrX-4449 chrX 55698134 55698344 + 7.07 0.000 Intergenic LTR8A|LTR|ERV1 -19510 NM_006064 10325 Hs.50282 NM_006064 ENSG00000083750 RRAGB RAGB|bA465E19.1 Ras related GTP binding B protein-coding chr7-4475 chr7 136938562 136938772 + 7.07 0.000 intron (NR_046103, intron 2 of 3) intron (NR_046103, intron 2 of 3) 35500 NR_030165 574443 NR_030165 ENSG00000207597 MIR490 MIRN490|hsa-mir-490|miR-490 microRNA 490 ncRNA chr2-7622 chr2 26862673 26862883 + 7.07 0.000 intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 14354 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr3-9128 chr3 31202066 31202276 + 7.07 0.000 Intergenic L2c|LINE|L2 -40384 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr10-6701 chr10 122419382 122419592 + 7.07 0.000 intron (NM_001330178, intron 9 of 13) intron (NM_001330178, intron 9 of 13) 2522 NR_037506 100500866 NR_037506 ENSG00000265442 MIR3941 - microRNA 3941 ncRNA chr5-7631 chr5 50824164 50824374 + 7.07 0.000 intron (NM_024615, intron 17 of 25) intron (NM_024615, intron 17 of 25) 145918 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chr14-5144 chr14 90752377 90752587 + 7.07 0.000 intron (NM_001320421, intron 3 of 20) intron (NM_001320421, intron 3 of 20) 55149 NR_135190 105370622 Hs.662373 NR_135190 ENSG00000258716 LOC105370622 - uncharacterized LOC105370622 ncRNA chr11-8709 chr11 6331806 6332016 + 7.07 0.000 Intergenic Intergenic -11410 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chrX-3716 chrX 117540031 117540241 + 7.07 0.000 Intergenic Intergenic 433602 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr13-2026 chr13 44164426 44164636 + 7.07 0.000 Intergenic Intergenic -3274 NM_024058 79024 Hs.730073 NM_024058 ENSG00000139656 SMIM2 C13orf44 small integral membrane protein 2 protein-coding chr20-583 chr20 5610857 5611067 + 7.07 0.000 promoter-TSS (NM_019593) promoter-TSS (NM_019593) 44 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr3-2619 chr3 185595632 185595842 + 7.07 0.000 intron (NM_021627, intron 2 of 16) intron (NM_021627, intron 2 of 16) 9442 NM_021627 59343 Hs.401388 NM_021627 ENSG00000163904 SENP2 AXAM2|SMT3IP2 SUMO specific peptidase 2 protein-coding chr9-7242 chr9 3206461 3206671 + 7.07 0.000 Intergenic L1ME3A|LINE|L1 24977 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr16-6006 chr16 8353080 8353290 + 7.07 0.000 Intergenic L1ME5|LINE|L1 236653 NM_001290095 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr19-4728 chr19 19418058 19418268 + 7.07 0.000 intron (NM_001359631, intron 1 of 10) intron (NM_001359631, intron 1 of 10) -16900 NR_030370 693225 NR_030370 ENSG00000207821 MIR640 MIRN640|hsa-mir-640 microRNA 640 ncRNA chr11-4809 chr11 6737773 6737983 + 7.07 0.000 Intergenic Intergenic -15999 NR_003945 387751 Hs.494757 NR_003945 ENSG00000254838 GVINP1 GVIN1|GVIN1P|VLIG-1|VLIG1 GTPase, very large interferon inducible pseudogene 1 pseudo chr5-6921 chr5 135536918 135537128 + 7.07 0.000 Intergenic Intergenic -1059 NM_006161 4762 Hs.248149 NM_006161 ENSG00000181965 NEUROG1 AKA|Math4C|NEUROD3|bHLHa6|ngn1 neurogenin 1 protein-coding chr8-7064 chr8 115904903 115905113 + 7.07 0.000 Intergenic Intergenic -236033 NM_014112 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr4-7632 chr4 83043852 83044062 + 7.07 0.000 intron (NM_001258006, intron 1 of 8) Tigger15a|DNA|TcMar-Tigger 8774 NM_001258006 51138 Hs.190384 NM_016129 ENSG00000138663 COPS4 CSN4|SGN4 COP9 signalosome subunit 4 protein-coding chr2-7777 chr2 41033408 41033618 + 7.07 0.000 Intergenic AluSq2|SINE|Alu -521078 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chrX-1936 chrX 2901637 2901847 + 7.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR -3162 NR_144459 100506356 Hs.528631 NR_144459 ENSG00000229851 ARSD-AS1 - ARSD antisense RNA 1 ncRNA chr6-6866 chr6 10314173 10314383 + 7.07 0.000 Intergenic Intergenic -90224 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr14-3405 chr14 95671823 95672033 + 7.07 0.000 TTS (NR_152604) TTS (NR_152604) -14498 NM_004918 9623 Hs.632346 NM_004918 ENSG00000213231 TCL1B SYN-1|TML1 T cell leukemia/lymphoma 1B protein-coding chr17-2799 chr17 7139503 7139713 + 7.07 0.000 Intergenic Intergenic -24797 NM_001201352 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chrX-3766 chrX 130187810 130188020 + 7.07 0.000 Intergenic L2a|LINE|L2 15953 NM_004794 9363 Hs.654356 NM_004794 ENSG00000134594 RAB33A RabS10 RAB33A, member RAS oncogene family protein-coding chr17-5318 chr17 28181095 28181305 + 7.07 0.000 intron (NM_016231, intron 7 of 10) AluSx1|SINE|Alu -45363 NR_003064 23615 Hs.157195 NM_021093 ENSG00000237575 PYY2 - peptide YY 2 (pseudogene) pseudo chr6-7789 chr6 97663617 97663827 + 7.07 0.000 intron (NR_110757, intron 3 of 4) intron (NR_110757, intron 3 of 4) 358136 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr12-5564 chr12 8392679 8392889 + 7.07 0.000 Intergenic ERVL-B4-int|LTR|ERVL -2032 NR_024420 389634 Hs.434403 NM_001012988 ENSG00000226091 LINC00937 - long intergenic non-protein coding RNA 937 ncRNA chr20-4093 chr20 40437808 40438018 + 7.07 0.000 Intergenic Intergenic 251323 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr10-7897 chr10 50031267 50031477 + 7.07 0.000 intron (NR_038275, intron 6 of 6) AluJb|SINE|Alu 36431 NR_038275 100421577 Hs.712902 NR_038275 ENSG00000235618 FAM21EP - family with sequence similarity 21, member A pseudogene pseudo chr16-2690 chr16 80491165 80491375 + 7.07 0.000 intron (NR_120307, intron 2 of 5) L2a|LINE|L2 -49464 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr3-5694 chr3 14203689 14203899 + 7.07 0.000 Intergenic Intergenic 24977 NM_014463 27258 Hs.111632 NM_014463 ENSG00000170860 LSM3 SMX4|USS2|YLR438C LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr1-13388 chr1 1678788 1678998 + 7.07 0.000 intron (NM_001110781, intron 1 of 8) intron (NM_001110781, intron 1 of 8) 13902 NM_001290264 728661 Hs.655255 NM_001110781 ENSG00000189339 SLC35E2B SLC35E2 solute carrier family 35 member E2B protein-coding chr15-3837 chr15 79110982 79111192 + 7.07 0.000 Intergenic L1MD1|LINE|L1 -20307 NM_001145648 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr10-8488 chr10 89295756 89295966 + 7.07 0.000 Intergenic Intergenic -6185 NM_001547 3433 Hs.437609 NM_001547 ENSG00000119922 IFIT2 G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 interferon induced protein with tetratricopeptide repeats 2 protein-coding chr1-14111 chr1 31083984 31084194 + 7.07 0.000 Intergenic L1M5|LINE|L1 -18372 NM_001020658 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr13-4328 chr13 101570548 101570758 + 7.07 0.000 intron (NM_001271754, intron 2 of 10) MER57F|LTR|ERV1 80701 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr10-4495 chr10 84583761 84583971 + 7.07 0.000 Intergenic Intergenic 158697 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr6-7010 chr6 22286818 22287028 + 7.07 0.000 TTS (NM_000948) TTS (NM_000948) 10113 NM_000948 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr2-8600 chr2 140121789 140121999 + 7.07 0.000 Intergenic LTR1E|LTR|ERV1 464791 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr5-5399 chr5 135253315 135253525 + 7.07 0.000 intron (NR_161235, intron 3 of 5) L3|LINE|CR1 -5243 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr1-9508 chr1 38296843 38297053 + 7.07 0.000 Intergenic L2c|LINE|L2 -82181 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA chr2-6015 chr2 95509352 95509562 + 7.07 0.000 Intergenic Intergenic -24726 NM_001164464 653192 Hs.723811 NM_001164464 ENSG00000144010 TRIM43B - tripartite motif containing 43B protein-coding chr6-5367 chr6 150597032 150597242 + 7.07 0.000 Intergenic Intergenic -2748 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr5-3771 chr5 63633749 63633959 + 7.07 0.000 Intergenic L3|LINE|CR1 328438 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr20-2591 chr20 38330915 38331125 + 7.07 0.000 intron (NM_001725, intron 11 of 14) intron (NM_001725, intron 11 of 14) -15462 NM_004139 3929 Hs.154078 NM_004139 ENSG00000129988 LBP BPIFD2 lipopolysaccharide binding protein protein-coding chr18-1980 chr18 39660274 39660484 + 7.07 0.000 intron (NR_024391, intron 2 of 3) intron (NR_024391, intron 2 of 3) -16342 NR_049847 100847025 NR_049847 ENSG00000266148 MIR5583-1 - microRNA 5583-1 ncRNA chr1-15894 chr1 183567813 183568023 + 7.07 0.000 intron (NM_001190794, intron 6 of 13) intron (NM_001190794, intron 6 of 13) 22686 NM_001190789 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr4-7066 chr4 30647895 30648105 + 7.07 0.000 Intergenic Intergenic -72369 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr3-9012 chr3 19596074 19596284 + 7.07 0.000 Intergenic L1PA16|LINE|L1 -281248 NR_039954 100616291 NR_039954 ENSG00000271898 MIR4791 mir-4791 microRNA 4791 ncRNA chr2-13239 chr2 125355398 125355608 + 7.07 0.000 Intergenic Intergenic 762482 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr10-7333 chr10 575427 575637 + 7.07 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -53032 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr18-1998 chr18 41336413 41336623 + 7.07 0.000 Intergenic L3|LINE|CR1 184159 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr14-4874 chr14 71293918 71294128 + 7.07 0.000 Intergenic L1MC5|LINE|L1 -26453 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr10-8994 chr10 120888441 120888651 + 7.07 0.000 intron (NM_018117, intron 16 of 28) intron (NM_018117, intron 16 of 28) 37184 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr18-1178 chr18 23090116 23090326 + 7.07 0.000 Intergenic Intergenic -44343 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr9-4314 chr9 124459464 124459674 + 7.07 0.000 Intergenic MER2|DNA|TcMar-Tigger -44127 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr7-9550 chr7 141072423 141072633 + 7.07 0.000 Intergenic Intergenic -1536 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr17-6488 chr17 21404652 21404862 + 7.07 0.000 intron (NM_021012, intron 1 of 2) intron (NM_021012, intron 1 of 2) 28400 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr6-5301 chr6 142009653 142009863 + 7.07 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 79041 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr20-2857 chr20 62400307 62400517 + 7.07 0.000 intron (NM_031215, intron 1 of 9) intron (NM_031215, intron 1 of 9) 6871 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding chr17-7552 chr17 18975789 18975999 + 7.07 0.000 intron (NM_001039999, intron 5 of 5) L1MB8|LINE|L1 23729 NM_152351 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr8-7226 chr8 127224252 127224462 + 7.07 0.000 Intergenic L2c|LINE|L2 -5089 NR_108049 100507056 Hs.343864 NR_108049 CCAT1 CARLO5|CARLo-5|onco-lncRNA-40 colon cancer associated transcript 1 ncRNA chr6-5768 chr6 165993948 165994158 + 7.07 0.000 Intergenic L1MC4|LINE|L1 -6014 NR_026861 90632 Hs.31917 NR_026860 ENSG00000112541 LINC00473 C6orf176|LNC473|bA142J11.1 long intergenic non-protein coding RNA 473 ncRNA chr1-16479 chr1 228918702 228918912 + 7.07 0.000 Intergenic Intergenic 183328 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr18-2207 chr18 63518405 63518615 + 7.07 0.000 Intergenic MIR3|SINE|MIR -37650 NM_001307928 89777 Hs.348541 NM_080474 ENSG00000166634 SERPINB12 YUKOPIN serpin family B member 12 protein-coding chr5-7761 chr5 61459501 61459711 + 7.07 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 127348 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr8-5167 chr8 94574228 94574438 + 7.07 0.000 Intergenic Intergenic -20815 NM_183009 25962 Hs.202238 NM_015496 ENSG00000164944 VIRMA KIAA1429|MSTP054|fSAP121 vir like m6A methyltransferase associated protein-coding chr9-5796 chr9 128697411 128697621 + 7.07 0.000 Intergenic AluJo|SINE|Alu -4987 NM_013355 29941 Hs.300485 NM_013355 ENSG00000160447 PKN3 UTDP4-1 protein kinase N3 protein-coding chr2-14142 chr2 203372511 203372721 + 7.07 0.000 intron (NM_005759, intron 2 of 9) SVA_D|Retroposon|SVA 5732 NM_001282927 10152 Hs.471156 NM_005759 ENSG00000138443 ABI2 ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB abl interactor 2 protein-coding chr2-11532 chr2 240010528 240010738 + 7.07 0.000 intron (NR_136157, intron 4 of 7) intron (NR_136157, intron 4 of 7) 14709 NM_004544 4705 Hs.277677 NM_004544 ENSG00000130414 NDUFA10 CI-42KD|CI-42k|MC1DN22 NADH:ubiquinone oxidoreductase subunit A10 protein-coding chr10-3164 chr10 76992311 76992521 + 7.07 0.000 intron (NM_001322838, intron 19 of 29) intron (NM_001322838, intron 19 of 29) 104372 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr5-8973 chr5 161130361 161130571 + 7.07 0.000 Intergenic Intergenic -191840 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr16-6127 chr16 19375438 19375648 + 7.07 0.000 Intergenic Intergenic -34996 NM_001308161 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr11-6454 chr11 66803261 66803471 + 7.07 0.000 intron (NM_024650, intron 8 of 16) FLAM_C|SINE|Alu -40075 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr3-7936 chr3 153210100 153210310 + 7.07 0.000 Intergenic Intergenic 47979 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr9-3142 chr9 98944225 98944435 + 7.07 0.000 intron (NM_001855, intron 2 of 41) CpG-28591 423 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr20-2014 chr20 57618720 57618930 + 7.07 0.000 intron (NM_001160419, intron 1 of 4) AluSq|SINE|Alu 1601 NM_001323966 81030 Hs.302123 NM_030776 ENSG00000124256 ZBP1 C20orf183|DAI|DLM-1|DLM1 Z-DNA binding protein 1 protein-coding chr3-4730 chr3 65875456 65875666 + 7.07 0.000 intron (NR_145422, intron 2 of 2) MIR3|SINE|MIR -18255 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr12-7426 chr12 59742821 59743031 + 7.07 0.000 intron (NR_073056, intron 3 of 6) intron (NR_073056, intron 3 of 6) 53556 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr2-9670 chr2 30797682 30797892 + 7.07 0.000 intron (NM_144575, intron 1 of 22) intron (NM_144575, intron 1 of 22) 9659 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr12-2264 chr12 96241915 96242125 + 7.07 0.000 intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) -13478 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr13-4209 chr13 93045167 93045377 + 7.07 0.000 promoter-TSS (NR_126360) promoter-TSS (NR_126360) -69 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA chr7-6643 chr7 129123246 129123456 + 7.07 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -2920 NR_002144 407835 Hs.592273 NR_002144 LOC407835 - mitogen-activated protein kinase kinase 2 pseudogene pseudo chr8-5437 chr8 37259510 37259720 + 7.07 0.000 Intergenic Intergenic 234298 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr2-12448 chr2 59018393 59018603 + 7.07 0.000 intron (NR_033873, intron 8 of 13) intron (NR_033873, intron 8 of 13) -199210 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr5-6555 chr5 15190226 15190436 + 7.07 0.000 Intergenic Intergenic 76229 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr3-9904 chr3 85179310 85179520 + 7.07 0.000 intron (NM_001167674, intron 1 of 9) intron (NM_001167674, intron 1 of 9) -117151 NR_132777 106635529 NR_132777 SNORA95 - small nucleolar RNA, H/ACA box 95 snoRNA chr16-4180 chr16 10761864 10762074 + 7.07 0.000 intron (NM_001323597, intron 9 of 10) intron (NM_001323597, intron 9 of 10) 18100 NM_001323597 4682 Hs.81469 NM_002484 ENSG00000103274 NUBP1 CIAO5|NBP|NBP1|NBP35 nucleotide binding protein 1 protein-coding chrX-2550 chrX 100224336 100224546 + 7.07 0.000 Intergenic LTR8|LTR|ERV1 185832 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr10-6516 chr10 64371621 64371831 + 7.07 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -453802 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr12-6860 chr12 18217649 18217859 + 7.07 0.000 Intergenic Intergenic -43786 NM_001288774 5288 Hs.22500 NM_004570 ENSG00000139144 PIK3C2G PI3K-C2-gamma|PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma protein-coding chr11-8418 chr11 103007716 103007926 + 7.07 0.000 Intergenic Intergenic -52089 NM_002427 4322 Hs.2936 NM_002427 ENSG00000137745 MMP13 CLG3|MANDP1|MDST|MMP-13 matrix metallopeptidase 13 protein-coding chr16-4448 chr16 54665180 54665390 + 7.07 0.000 Intergenic L1P3|LINE|L1 182948 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr19-3834 chr19 12862421 12862631 + 7.07 0.000 intron (NM_014975, intron 12 of 25) intron (NM_014975, intron 12 of 25) 10266 NR_106852 102466196 NR_106852 ENSG00000276181 MIR6794 hsa-mir-6794 microRNA 6794 ncRNA chr10-7009 chr10 75310408 75310618 + 7.07 0.000 intron (NR_038226, intron 2 of 3) L1MDa|LINE|L1 14130 NR_038224 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA chr22-3187 chr22 34331655 34331865 + 7.07 0.000 Intergenic L1MB1|LINE|L1 -408872 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr9-7938 chr9 90303972 90304182 + 7.07 0.000 intron (NR_109795, intron 2 of 2) intron (NR_109795, intron 2 of 2) 129412 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr2-14820 chr2 241287615 241287825 + 7.07 0.000 intron (NM_005336, intron 1 of 27) AluSz6|SINE|Alu -14834 NM_001243900 3069 Hs.471851 NM_005336 ENSG00000115677 HDLBP HBP|PRO2900|VGL high density lipoprotein binding protein protein-coding chr6-5234 chr6 135583083 135583293 + 7.07 0.000 intron (NR_152845, intron 2 of 4) intron (NR_152845, intron 2 of 4) 85387 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr1-4207 chr1 102122662 102122872 + 7.07 0.000 Intergenic L1MA4A|LINE|L1 -125533 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr4-3799 chr4 108511839 108512049 + 7.07 0.000 Intergenic Intergenic -45289 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chr7-7471 chr7 93843435 93843645 + 7.07 0.000 Intergenic Intergenic 47213 NM_001271004 7980 Hs.438231 NM_006528 ENSG00000105825 TFPI2 PP5|REF1|TFPI-2 tissue factor pathway inhibitor 2 protein-coding chr2-8531 chr2 131056117 131056327 + 7.07 0.000 intron (NM_001321746, intron 3 of 6) intron (NM_001321746, intron 3 of 6) 36940 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr5-4394 chr5 177440935 177441145 + 7.07 0.000 exon (NM_001364164, exon 14 of 15) exon (NM_001364164, exon 14 of 15) -5774 NM_030567 80758 Hs.534492 NM_030567 ENSG00000131188 PRR7 - proline rich 7, synaptic protein-coding chr19-5621 chr19 3981151 3981361 + 7.07 0.000 intron (NM_001961, intron 7 of 14) intron (NM_001961, intron 7 of 14) 1316 NR_002602 26812 NR_002602 ENSG00000206775 SNORD37 RNU37|U37 small nucleolar RNA, C/D box 37 snoRNA chr4-5778 chr4 75914221 75914431 + 7.07 0.000 3' UTR (NM_014435, exon 11 of 11) 3' UTR (NM_014435, exon 11 of 11) -11874 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr4-7237 chr4 45072977 45073187 + 7.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR -346448 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr10-7451 chr10 7409845 7410055 + 7.07 0.000 promoter-TSS (NM_001018039) promoter-TSS (NM_001018039) -609 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr2-14138 chr2 202822486 202822696 + 7.07 0.000 intron (NM_001288624, intron 2 of 3) intron (NM_001288624, intron 2 of 3) 6643 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr2-12962 chr2 103368816 103369026 + 7.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -384492 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr1-12003 chr1 93597857 93598067 + 7.07 0.000 intron (NR_034091, intron 2 of 3) intron (NR_034091, intron 2 of 3) 5994 NR_034091 100129046 Hs.729244 NR_034091 LOC100129046 - uncharacterized LOC100129046 ncRNA chr17-7788 chr17 39709182 39709392 + 7.07 0.000 intron (NM_001005862, intron 6 of 29) intron (NM_001005862, intron 6 of 29) 9309 NM_004448 2064 Hs.446352 NM_004448 ENSG00000141736 ERBB2 CD340|HER-2|HER-2/neu|HER2|MLN 19|NEU|NGL|TKR1 erb-b2 receptor tyrosine kinase 2 protein-coding chr5-5177 chr5 110713925 110714135 + 7.07 0.000 intron (NM_001039763, intron 1 of 13) MER101B|LTR|ERV1 12641 NM_001039763 642987 Hs.729154 NM_001039763 ENSG00000186952 TMEM232 - transmembrane protein 232 protein-coding chr2-10485 chr2 220940706 220940916 + 7.07 0.000 Intergenic LTR1D|LTR|ERV1 631493 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding GL000218.1-6 GL000218.1 19508 19718 + 7.07 0.000 NA NA NA NA chr4-7352 chr4 57477530 57477740 + 7.07 0.000 Intergenic THE1C|LTR|ERVL-MaLR 51763 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr11-6219 chr11 46693700 46693910 + 7.07 0.000 intron (NM_004308, intron 3 of 12) MER63A|DNA|hAT-Blackjack 6814 NM_004308 392 Hs.138860 NM_004308 ENSG00000175220 ARHGAP1 CDC42GAP|RHOGAP|RHOGAP1|p50rhoGAP Rho GTPase activating protein 1 protein-coding chr3-7295 chr3 10531411 10531621 + 7.07 0.000 intron (NM_001353564, intron 2 of 20) MIR|SINE|MIR -25930 NM_001683 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr3-3432 chr3 126316493 126316703 + 7.07 0.000 Intergenic G-rich|Low_complexity|Low_complexity 40810 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr1-16326 chr1 217525298 217525508 + 7.07 0.000 intron (NM_018040, intron 5 of 9) intron (NM_018040, intron 5 of 9) 105687 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr2-13137 chr2 118204084 118204294 + 7.07 0.000 Intergenic L1PA10|LINE|L1 -17803 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr15-4440 chr15 45725842 45726052 + 7.07 0.000 intron (NR_135680, intron 1 of 4) intron (NR_135680, intron 1 of 4) 20752 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr14-2627 chr14 63554940 63555150 + 7.07 0.000 Intergenic MER1B|DNA|hAT-Charlie -11650 NM_001354926 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr1-16274 chr1 212828705 212828915 + 7.07 0.000 Intergenic Intergenic 18839 NM_001024601 149643 Hs.153274 NM_001024601 ENSG00000185523 SPATA45 C1orf227 spermatogenesis associated 45 protein-coding chr9-5301 chr9 85511770 85511980 + 7.07 0.000 Intergenic Intergenic 230154 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr6-3969 chr6 107543141 107543351 + 7.07 0.000 intron (NM_018013, intron 4 of 6) MLT1K|LTR|ERVL-MaLR 53129 NM_018013 55084 Hs.445244 NM_018013 ENSG00000112320 SOBP JXC1|MRAMS sine oculis binding protein homolog protein-coding chr18-3493 chr18 73210026 73210236 + 7.07 0.000 intron (NR_034133, intron 2 of 5) L1PA7|LINE|L1 54367 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA chr16-3670 chr16 89592170 89592380 + 7.07 0.000 intron (NM_153636, intron 13 of 14) AluY|SINE|Alu 16517 NM_014427 27132 Hs.461775 NM_014427 ENSG00000178773 CPNE7 - copine 7 protein-coding chr9-7314 chr9 11094870 11095080 + 7.07 0.000 Intergenic L2c|LINE|L2 481769 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr6-6465 chr6 108984219 108984429 + 7.07 0.000 TTS (NM_014454) TTS (NM_014454) 24664 NM_001199934 27244 Hs.591336 NM_014454 ENSG00000080546 SESN1 PA26|SEST1 sestrin 1 protein-coding chr16-5761 chr16 87165284 87165494 + 7.07 0.000 Intergenic AluJb|SINE|Alu -46726 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr11-5155 chr11 2730881 2731091 + 7.07 0.000 intron (NM_181798, intron 11 of 15) intron (NM_181798, intron 11 of 15) -30988 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr6-7553 chr6 70885976 70886186 + 7.07 0.000 intron (NM_080742, intron 2 of 3) intron (NM_080742, intron 2 of 3) 70979 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr1-12102 chr1 157381142 157381352 + 7.07 0.000 Intergenic Intergenic 171268 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr17-5653 chr17 50075690 50075900 + 7.07 0.000 intron (NM_002204, intron 12 of 25) intron (NM_002204, intron 12 of 25) -18942 NM_001199898 5164 Hs.256667 NM_002611 ENSG00000005882 PDK2 PDHK2|PDKII pyruvate dehydrogenase kinase 2 protein-coding chr2-13514 chr2 150705659 150705869 + 7.07 0.000 Intergenic Charlie24|DNA|hAT-Charlie 76867 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr10-5401 chr10 75347799 75348009 + 7.07 0.000 intron (NR_038226, intron 2 of 3) AluSx1|SINE|Alu 51521 NR_038224 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA chr8-6482 chr8 62828315 62828525 + 7.07 0.000 intron (NM_001304533, intron 4 of 6) intron (NM_001304533, intron 4 of 6) -149441 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr17-6077 chr17 80176899 80177109 + 7.07 0.000 intron (NM_001366385, intron 2 of 23) MLT1C|LTR|ERVL-MaLR -1504 NM_024110 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr4-5830 chr4 102177523 102177733 + 7.07 0.000 Intergenic L2a|LINE|L2 146684 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr3-5272 chr3 116599471 116599681 + 7.07 0.000 Intergenic Intergenic 47103 NR_046624 100861506 Hs.641878 NR_046624 LINC00903 LSAMP-AS2 long intergenic non-protein coding RNA 903 ncRNA chr4-3782 chr4 99606418 99606628 + 7.07 0.000 intron (NM_001300785, intron 10 of 17) intron (NM_001300785, intron 10 of 17) 42445 NM_001300785 4547 Hs.195799 NM_000253 ENSG00000138823 MTTP ABL|MTP microsomal triglyceride transfer protein protein-coding chr10-3686 chr10 103850429 103850639 + 7.07 0.000 intron (NM_014631, intron 1 of 13) intron (NM_014631, intron 1 of 13) 4872 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr5-2992 chr5 969663 969873 + 7.07 0.000 Intergenic Intergenic 27572 NR_104615 100506688 Hs.532063 NM_001242737 ENSG00000215246 LOC100506688 - uncharacterized LOC100506688 ncRNA chr2-3870 chr2 38158619 38158829 + 7.07 0.000 intron (NR_027252, intron 2 of 2) intron (NR_027252, intron 2 of 2) 27619 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr18-3506 chr18 74173032 74173242 + 7.07 0.000 Intergenic Intergenic 24614 NM_014177 29090 Hs.532835 NM_014177 ENSG00000075336 TIMM21 C18orf55|HSPC154|TIM21 translocase of inner mitochondrial membrane 21 protein-coding chr10-5628 chr10 95798347 95798557 + 7.07 0.000 intron (NR_038444, intron 4 of 5) intron (NR_038444, intron 4 of 5) 42289 NM_001776 953 Hs.576612 NM_001776 ENSG00000138185 ENTPD1 ATPDase|CD39|NTPDase-1|SPG64 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding chr3-9525 chr3 52253937 52254147 + 7.07 0.000 TTS (NM_025222) TTS (NM_025222) 7875 NM_001122870 132160 Hs.373560 NM_144641 ENSG00000164088 PPM1M PP2C-eta|PP2CE|PP2Ceta protein phosphatase, Mg2+/Mn2+ dependent 1M protein-coding chr7-5256 chr7 19203555 19203765 + 7.07 0.000 Intergenic Intergenic -58239 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chr2-7165 chr2 203649861 203650071 + 7.07 0.000 Intergenic Intergenic -56509 NM_001243078 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr3-7808 chr3 97713725 97713935 + 7.07 0.000 intron (NM_001080448, intron 14 of 17) intron (NM_001080448, intron 14 of 17) -50691 NM_032146 84100 Hs.373801 NM_032146 ENSG00000113966 ARL6 BBS3|RP55 ADP ribosylation factor like GTPase 6 protein-coding chr11-7588 chr11 36463779 36463989 + 7.07 0.000 3' UTR (NM_001160168, exon 6 of 6) 3' UTR (NM_001160168, exon 6 of 6) 46388 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr2-7118 chr2 182953293 182953503 + 7.07 0.000 intron (NM_013436, intron 20 of 30) intron (NM_013436, intron 20 of 30) 85059 NM_013436 10787 Hs.603732 NM_013436 ENSG00000061676 NCKAP1 HEM2|NAP1|NAP125|p125Nap1 NCK associated protein 1 protein-coding chr18-1677 chr18 72760387 72760597 + 7.07 0.000 intron (NR_148694, intron 7 of 11) intron (NR_148694, intron 7 of 11) 92890 NR_049858 100847083 NR_049858 ENSG00000263750 MIR548AV - microRNA 548av ncRNA chrX-3243 chrX 72706135 72706345 + 7.07 0.000 intron (NM_002637, intron 2 of 31) intron (NM_002637, intron 2 of 31) 7941 NM_001172436 5255 Hs.201379 NM_002637 ENSG00000067177 PHKA1 PHKA phosphorylase kinase regulatory subunit alpha 1 protein-coding chr7-4877 chr7 112068284 112068494 + 7.07 0.000 intron (NM_001363540, intron 1 of 52) MIRb|SINE|MIR 138010 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr12-6967 chr12 27934248 27934458 + 7.07 0.000 Intergenic L1MC1|LINE|L1 35623 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr17-7604 chr17 22438432 22438642 + 7.07 0.000 Intergenic Intergenic 32518 NR_027084 284124 Hs.310247 NR_027084 ENSG00000276399 FLJ36000 - uncharacterized FLJ36000 ncRNA chr20-1714 chr20 38658222 38658432 + 7.07 0.000 Intergenic L2c|LINE|L2 56518 NM_001164431 343578 NM_001164431 ENSG00000124143 ARHGAP40 C20orf95|dJ1100H13.4 Rho GTPase activating protein 40 protein-coding chr12-6468 chr12 98030229 98030439 + 7.07 0.000 Intergenic L2a|LINE|L2 -34886 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr9-4362 chr9 132481631 132481841 + 7.07 0.000 intron (NM_001282957, intron 1 of 5) intron (NM_001282957, intron 1 of 5) 71525 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr2-8969 chr2 190057497 190057707 + 7.07 0.000 exon (NM_005259, exon 3 of 3) exon (NM_005259, exon 3 of 3) 5127 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr17-6972 chr17 48231789 48231999 + 7.07 0.000 intron (NM_001075099, intron 4 of 12) MIR3|SINE|MIR -62453 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr7-5711 chr7 70357230 70357440 + 7.07 0.000 intron (NM_015570, intron 4 of 18) intron (NM_015570, intron 4 of 18) 758860 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr13-4457 chr13 112826199 112826409 + 7.07 0.000 intron (NM_032189, intron 11 of 28) intron (NM_032189, intron 11 of 28) -71573 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr6-6281 chr6 36643371 36643581 + 7.07 0.000 Intergenic Intergenic -20964 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr6-7781 chr6 97292617 97292827 + 7.07 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -9506 NM_001350600 253714 Hs.444292 NM_198468 ENSG00000146263 MMS22L C6orf167|dJ39B17.2 MMS22 like, DNA repair protein protein-coding chr4-8083 chr4 123444462 123444672 + 7.07 0.000 Intergenic Intergenic 45027 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr9-7112 chr9 130402197 130402407 + 7.07 0.000 intron (NM_001291815, intron 77 of 97) intron (NM_001291815, intron 77 of 97) -42405 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr17-6281 chr17 42003679 42003889 + 7.07 0.000 intron (NM_003315, intron 1 of 13) intron (NM_003315, intron 1 of 13) 13381 NM_001144766 7266 Hs.500156 NM_003315 ENSG00000168259 DNAJC7 DJ11|DJC7|TPR2|TTC2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding chr6-6024 chr6 115861482 115861692 + 7.07 0.000 Intergenic THE1D|LTR|ERVL-MaLR -177144 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo chr14-3070 chr14 61746539 61746749 + 7.07 0.000 TTS (NR_045406) TTS (NR_045406) 2445 NR_045406 100750247 Hs.597216 NR_045406 HIF1A-AS2 3'aHIF-1A|aHIF HIF1A antisense RNA 2 ncRNA chr12-3334 chr12 89156889 89157099 + 7.07 0.000 Intergenic Intergenic -137302 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr2-9604 chr2 241553686 241553896 + 7.07 0.000 intron (NR_033346, intron 1 of 1) intron (NR_033346, intron 1 of 1) -4954 NM_032515 666 Hs.293753 NM_032515 ENSG00000176720 BOK BCL2L9|BOKL BCL2 family apoptosis regulator BOK protein-coding chr11-9546 chr11 64518708 64518918 + 7.07 0.000 Intergenic ERVL-E-int|LTR|ERVL -37128 NM_018484 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr4-7847 chr4 102196042 102196252 + 7.07 0.000 Intergenic Intergenic 128165 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr1-11160 chr1 237507649 237507859 + 7.07 0.000 intron (NM_001035, intron 23 of 104) MIRc|SINE|MIR 36635 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr3-10449 chr3 132872665 132872875 + 7.07 0.000 intron (NR_002811, intron 10 of 10) intron (NR_002811, intron 10 of 10) -150311 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr4-6303 chr4 85135585 85135795 + 7.07 0.000 Intergenic MSTD|LTR|ERVL-MaLR 168206 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr4-2506 chr4 26522483 26522693 + 7.07 0.000 Intergenic Intergenic -32104 NM_000730 886 Hs.129 NM_000730 ENSG00000163394 CCKAR CCK-A|CCK1-R|CCK1R|CCKRA cholecystokinin A receptor protein-coding chr6-5065 chr6 114300849 114301059 + 7.07 0.000 intron (NR_125845, intron 9 of 9) L1MB8|LINE|L1 -238077 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chrX-1454 chrX 87905796 87906006 + 7.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR 388099 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr1-15310 chr1 118412926 118413136 + 7.07 0.000 Intergenic L1MB2|LINE|L1 -227803 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr15-5083 chr15 87071785 87071995 + 7.07 0.000 Intergenic MER5A|DNA|hAT-Charlie -83464 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA chrX-3054 chrX 104919448 104919658 + 7.07 0.000 intron (NM_017416, intron 2 of 10) AluSx1|SINE|Alu 301140 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr8-6996 chr8 108583090 108583300 + 7.07 0.000 Intergenic L2a|LINE|L2 139571 NM_014673 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr17-6327 chr17 63486522 63486732 + 7.07 0.000 exon (NM_001178057, exon 3 of 13) exon (NM_001178057, exon 3 of 13) 1781 NM_001178057 1636 Hs.298469 NM_000789 ENSG00000159640 ACE ACE1|CD143|DCP|DCP1 angiotensin I converting enzyme protein-coding chr15-1913 chr15 79092725 79092935 + 7.07 0.000 Intergenic Intergenic -2050 NM_001145648 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr15-3316 chr15 79193149 79193359 + 7.07 0.000 intron (NR_038997, intron 1 of 1) MLT1I|LTR|ERVL-MaLR -16534 NR_029705 406960 NR_029705 ENSG00000207695 MIR184 EDICT|MIRN184|miR-184 microRNA 184 ncRNA chr5-8326 chr5 117553000 117553210 + 7.07 0.000 intron (NR_046089, intron 4 of 5) (AT)n|Simple_repeat|Simple_repeat 137593 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr9-1841 chr9 136042603 136042813 + 7.07 0.000 intron (NM_144653, intron 2 of 5) intron (NM_144653, intron 2 of 5) 52581 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr15-4990 chr15 80115147 80115357 + 7.07 0.000 intron (NM_001242917, intron 2 of 6) intron (NM_001242917, intron 2 of 6) 16836 NM_001242919 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr1-13327 chr1 242544732 242544942 + 7.07 0.000 Intergenic Intergenic -20140 NM_001320272 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr17-7239 chr17 1794326 1794536 + 7.07 0.000 intron (NM_052928, intron 5 of 10) intron (NM_052928, intron 5 of 10) 22760 NM_001329905 5176 Hs.532768 NM_002615 ENSG00000132386 SERPINF1 EPC-1|OI12|OI6|PEDF|PIG35 serpin family F member 1 protein-coding chr9-3752 chr9 123296633 123296843 + 7.07 0.000 Intergenic L2c|LINE|L2 -28152 NM_018387 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr12-7904 chr12 108029796 108030006 + 7.07 0.000 Intergenic Intergenic -99387 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr20-886 chr20 32563046 32563256 + 7.07 0.000 intron (NM_001256798, intron 1 of 10) GA-rich|Low_complexity|Low_complexity 22182 NM_001256798 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr2-14154 chr2 203869247 203869457 + 7.07 0.000 intron (NM_005214, intron 1 of 3) L2c|LINE|L2 1581 NM_005214 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr21-1197 chr21 43962675 43962885 + 7.07 0.000 intron (NM_001369880, intron 2 of 8) L1MEd|LINE|L1 37382 NM_001037553 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr13-3481 chr13 19001731 19001941 + 7.07 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -6423 NR_026852 348021 Hs.314114 NR_026852 ENSG00000232685 LINC00442 - long intergenic non-protein coding RNA 442 ncRNA chr9-6377 chr9 25846566 25846776 + 7.07 0.000 Intergenic L1MEd|LINE|L1 66615 NR_121604 101929582 Hs.140547 NR_121604 ENSG00000236306 LINC01241 - long intergenic non-protein coding RNA 1241 ncRNA chr7-9070 chr7 104436175 104436385 + 7.07 0.000 intron (NM_199000, intron 1 of 2) MIR|SINE|MIR 107624 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr20-2325 chr20 9491347 9491557 + 7.07 0.000 Intergenic Intergenic -22906 NM_001199897 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chr21-1901 chr21 44510770 44510980 + 7.07 0.000 intron (NR_103707, intron 6 of 6) CpG 4831 NR_103707 54082 Hs.570444 NR_103707 ENSG00000235890 TSPEAR-AS1 C21orf31 TSPEAR antisense RNA 1 ncRNA chr5-9198 chr5 180026379 180026589 + 7.07 0.000 intron (NM_001280801, intron 2 of 7) intron (NM_001280801, intron 2 of 7) -11087 NR_029885 442908 NR_029885 ENSG00000198995 MIR340 MIRN340|hsa-mir-340|mir-340 microRNA 340 ncRNA chr7-4914 chr7 130345353 130345563 + 7.07 0.000 intron (NM_001318223, intron 1 of 11) intron (NM_001318223, intron 1 of 11) 642 NM_001127441 93979 Hs.567642 NM_080385 ENSG00000158525 CPA5 - carboxypeptidase A5 protein-coding chr2-8286 chr2 102443389 102443599 + 7.07 0.000 intron (NM_003853, intron 8 of 11) L3|LINE|CR1 11205 NR_039930 100616157 NR_039930 ENSG00000264764 MIR4772 mir-4772 microRNA 4772 ncRNA chr11-10173 chr11 93870902 93871112 + 7.07 0.000 Intergenic Intergenic -20389 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr5-3888 chr5 149916948 149917158 + 7.07 0.000 intron (NM_000440, intron 5 of 21) AluYj4|SINE|Alu 15924 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr2-10206 chr2 100964757 100964967 + 7.07 0.000 exon (NM_002518, exon 9 of 21) exon (NM_002518, exon 9 of 21) 12299 NR_110213 101927142 Hs.656556 NR_110213 LOC101927142 - uncharacterized LOC101927142 ncRNA chrX-4709 chrX 87526025 87526235 + 7.07 0.000 intron (NM_057162, intron 1 of 10) intron (NM_057162, intron 1 of 10) 8328 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr3-6647 chr3 128086075 128086285 + 7.07 0.000 intron (NM_003707, intron 9 of 10) AluJb|SINE|Alu 10370 NR_046645 100874089 Hs.581603 NR_046645 ENSG00000239608 RUVBL1-AS1 - RUVBL1 antisense RNA 1 ncRNA chr12-8272 chr12 125306262 125306472 + 7.07 0.000 intron (NM_001366854, intron 1 of 8) L2a|LINE|L2 -20249 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr5-3975 chr5 11646209 11646419 + 7.07 0.000 intron (NM_001288717, intron 2 of 20) MIRb|SINE|MIR -57248 NM_001364128 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr6-6988 chr6 20024350 20024560 + 7.07 0.000 Intergenic Intergenic 187085 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr1-13533 chr1 6355649 6355859 + 7.07 0.000 intron (NM_007274, intron 1 of 8) intron (NM_007274, intron 1 of 8) 3175 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr16-4315 chr16 29318804 29319014 + 7.07 0.000 intron (NR_002939, intron 2 of 8) intron (NR_002939, intron 2 of 8) 16622 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr9-7504 chr9 32245439 32245649 + 7.07 0.000 Intergenic Intergenic -139059 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr11-6876 chr11 102283299 102283509 + 7.07 0.000 Intergenic MIR|SINE|MIR -34080 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr11-7500 chr11 3636907 3637117 + 7.07 0.000 intron (NR_002720, intron 6 of 6) intron (NR_002720, intron 6 of 6) 4980 NM_053017 116969 Hs.125680 NM_053017 ENSG00000167311 ART5 ARTC5 ADP-ribosyltransferase 5 protein-coding chr7-4867 chr7 106778657 106778867 + 7.07 0.000 Intergenic Intergenic -86520 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr11-7994 chr11 11945230 11945440 + 7.07 0.000 intron (NM_001282659, intron 20 of 27) intron (NM_001282659, intron 20 of 27) 63304 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr4-4223 chr4 16056282 16056492 + 7.07 0.000 intron (NM_001371408, intron 2 of 24) intron (NM_001371408, intron 2 of 24) 19731 NM_001145851 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr22-4070 chr22 42570381 42570591 + 7.07 0.000 intron (NM_014509, intron 9 of 11) MER33|DNA|hAT-Charlie 11525 NR_002184 91695 Hs.534041 NR_002184 ENSG00000182841 RRP7BP RRP7B|dJ222E13.2 ribosomal RNA processing 7 homolog B, pseudogene pseudo chr3-7594 chr3 12625769 12625979 + 7.07 0.000 intron (NR_148942, intron 1 of 16) intron (NR_148942, intron 1 of 16) 37634 NM_001354690 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr6-5796 chr6 8940287 8940497 + 7.07 0.000 Intergenic Intergenic 288183 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr2-4171 chr2 184138471 184138681 + 7.07 0.000 Intergenic L1PA12|LINE|L1 -240399 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr15-3768 chr15 64525909 64526119 + 7.07 0.000 intron (NM_015042, intron 1 of 8) AluSx3|SINE|Alu 26594 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr8-7406 chr8 139919520 139919730 + 7.07 0.000 intron (NM_001160372, intron 19 of 22) intron (NM_001160372, intron 19 of 22) 180910 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr12-8219 chr12 123759618 123759828 + 7.07 0.000 3' UTR (NM_012463, exon 20 of 20) 3' UTR (NM_012463, exon 20 of 20) -2772 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr7-4768 chr7 75864897 75865107 + 7.07 0.000 Intergenic Intergenic -13990 NR_144391 57414 Hs.488827 NM_020684 ENSG00000005486 RHBDD2 NPD007|RHBDL7 rhomboid domain containing 2 protein-coding chr9-7009 chr9 115276223 115276433 + 7.07 0.000 intron (NR_163556, intron 2 of 7) L1MA3|LINE|L1 134510 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr9-5090 chr9 34715320 34715530 + 7.07 0.000 Intergenic Intergenic -5289 NM_002989 6366 Hs.57907 NM_002989 ENSG00000137077 CCL21 6Ckine|CKb9|ECL|SCYA21|SLC|TCA4 C-C motif chemokine ligand 21 protein-coding chrX-5129 chrX 129707252 129707462 + 7.07 0.000 Intergenic L2|LINE|L2 -31622 NM_003399 7512 Hs.170499 NM_003399 ENSG00000122121 XPNPEP2 AEACEI|APP2 X-prolyl aminopeptidase 2 protein-coding chr20-3118 chr20 32627298 32627508 + 7.07 0.000 Intergenic Intergenic 39924 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr3-9613 chr3 57331062 57331272 + 7.07 0.000 intron (NM_001366028, intron 62 of 73) L2c|LINE|L2 -38482 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chr2-9038 chr2 198610658 198610868 + 7.07 0.000 Intergenic Intergenic -235666 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2-8575 chr2 136626338 136626548 + 7.07 0.000 Intergenic Intergenic -139102 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr2-4572 chr2 84481737 84481947 + 7.07 0.000 Intergenic Intergenic -22562 NM_003849 8802 Hs.270428 NM_003849 ENSG00000163541 SUCLG1 GALPHA|MTDPS9|SUCLA1 succinate-CoA ligase alpha subunit protein-coding chr5-5281 chr5 123465398 123465608 + 7.07 0.000 Intergenic L2a|LINE|L2 -41911 NM_001166226 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chrX-4979 chrX 116428863 116429073 + 7.07 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -7638 NM_007231 11254 Hs.522109 NM_007231 ENSG00000268104 SLC6A14 BMIQ11 solute carrier family 6 member 14 protein-coding chr11-7900 chr11 127843830 127844040 + 7.07 0.000 Intergenic Intergenic -364831 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr11-8008 chr11 13635500 13635710 + 7.07 0.000 Intergenic MER96|DNA|hAT-Tip100 -33063 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding chr2-3259 chr2 240674737 240674947 + 7.07 0.000 Intergenic Intergenic 8043 NM_001102467 653437 Hs.437167 NM_001102467 ENSG00000185176 AQP12B INSSA3 aquaporin 12B protein-coding chr9-7770 chr9 77638672 77638882 + 7.07 0.000 intron (NM_004297, intron 1 of 6) L2a|LINE|L2 9545 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr14-4501 chr14 37713011 37713221 + 7.07 0.000 intron (NM_001310135, intron 7 of 32) LTR67B|LTR|ERVL -59267 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr9-7717 chr9 73174955 73175165 + 7.07 0.000 Intergenic Intergenic 23195 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr8-6411 chr8 56947372 56947582 + 7.07 0.000 Intergenic MER21B|LTR|ERVL 46390 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr1-8474 chr1 116580796 116581006 + 7.07 0.000 intron (NM_001007237, intron 9 of 10) MLT1C|LTR|ERVL-MaLR -9808 NM_001144822 965 Hs.34341 NM_001779 ENSG00000116815 CD58 LFA-3|LFA3|ag3 CD58 molecule protein-coding chr3-5036 chr3 33152659 33152869 + 7.07 0.000 exon (NM_015551, exon 5 of 5) exon (NM_015551, exon 5 of 5) 38806 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr10-7761 chr10 33746778 33746988 + 7.07 0.000 Intergenic Intergenic 25797 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr6-5777 chr6 693585 693795 + 7.07 0.000 promoter-TSS (NR_073064) promoter-TSS (NR_073064) -549 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr1-15730 chr1 170970113 170970323 + 7.07 0.000 intron (NM_001163629, intron 7 of 21) intron (NM_001163629, intron 7 of 21) 34684 NM_025063 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding chr15-4322 chr15 40070170 40070380 + 7.07 0.000 Intergenic Intergenic 30964 NR_040062 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr18-2924 chr18 13226975 13227185 + 7.07 0.000 intron (NM_181482, intron 1 of 5) intron (NM_181482, intron 1 of 5) 8320 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr10-6009 chr10 125220392 125220602 + 7.07 0.000 Intergenic Intergenic -59467 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr7-7679 chr7 152622887 152623097 + 7.07 0.000 Intergenic Intergenic 53149 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr17-7043 chr17 61452179 61452389 + 7.07 0.000 promoter-TSS (NM_001321120) promoter-TSS (NM_001321120) -138 NM_001321120 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr2-6707 chr2 26537961 26538171 + 7.07 0.000 intron (NM_194248, intron 1 of 46) intron (NM_194248, intron 1 of 46) 20690 NM_001287489 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chrX-3717 chrX 117563873 117564083 + 7.07 0.000 Intergenic Intergenic 409760 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr3-10489 chr3 135359339 135359549 + 7.07 0.000 Intergenic MIRc|SINE|MIR 564184 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr12-2549 chr12 107606077 107606287 + 7.07 0.000 intron (NM_001018072, intron 4 of 16) MIR|SINE|MIR 25308 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr7-4180 chr7 120720569 120720779 + 7.07 0.000 intron (NM_012281, intron 1 of 5) LTR33A_|LTR|ERVL 137470 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr3-10720 chr3 154040511 154040721 + 7.07 0.000 intron (NR_037901, intron 2 of 3) L1MB2|LINE|L1 -80387 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr9-8206 chr9 108673561 108673771 + 7.07 0.000 Intergenic L2c|LINE|L2 182320 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr7-5668 chr7 64082306 64082516 + 7.07 0.000 3' UTR (NM_001159522, exon 4 of 4) 3' UTR (NM_001159522, exon 4 of 4) 36977 NM_001159522 442319 Hs.640774 NM_001159522 ENSG00000214652 ZNF727 ZNF727P zinc finger protein 727 protein-coding chr19-3731 chr19 43784543 43784753 + 7.07 0.000 Intergenic Intergenic -3675 NM_002250 3783 Hs.10082 NM_002250 ENSG00000104783 KCNN4 DHS2|IK|IK1|IKCA1|KCA4|KCa3.1|SK4|hIKCa1|hKCa4|hSK4 potassium calcium-activated channel subfamily N member 4 protein-coding chr1-9813 chr1 59732672 59732882 + 7.07 0.000 TTS (NR_039861) TTS (NR_039861) 519 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chrX-2666 chrX 115295961 115296171 + 7.07 0.000 intron (NM_001318840, intron 1 of 2) MamRep4096|DNA|hAT-Tip100 6351 NM_016383 51213 Hs.242183 NM_016383 ENSG00000102021 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding chr2-6826 chr2 62931917 62932127 + 7.07 0.000 intron (NM_001142615, intron 10 of 22) AluSg|SINE|Alu 115689 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr17-5817 chr17 64815707 64815917 + 7.07 0.000 intron (NR_024386, intron 4 of 10) intron (NR_024386, intron 4 of 10) 6290 NR_036199 100423004 NR_036199 ENSG00000284055 MIR4315-1 - microRNA 4315-1 ncRNA chr14-4168 chr14 78284493 78284703 + 7.07 0.000 intron (NM_001366425, intron 3 of 19) MIRc|SINE|MIR 114225 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr11-3170 chr11 62245311 62245521 + 7.07 0.000 TTS (NM_006551) TTS (NM_006551) 3177 NM_006551 10647 Hs.204096 NM_006551 ENSG00000124935 SCGB1D2 LIPB|LPHB|LPNB secretoglobin family 1D member 2 protein-coding chr3-7792 chr3 86811167 86811377 + 7.07 0.000 Intergenic L1MA3|LINE|L1 179877 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr18-2943 chr18 13881095 13881305 + 7.07 0.000 TTS (NM_000529) TTS (NM_000529) 34336 NM_000529 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding chr2-13917 chr2 182807403 182807613 + 7.07 0.000 Intergenic L2a|LINE|L2 59129 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chrX-3016 chrX 64975661 64975871 + 7.07 0.000 intron (NM_001178032, intron 1 of 4) intron (NM_001178032, intron 1 of 4) 684 NR_045044 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr1-12653 chr1 43686198 43686408 + 7.07 0.000 intron (NM_014663, intron 12 of 21) AluSx|SINE|Alu 21038 NR_033827 100132774 Hs.655569 NR_033827 KDM4A-AS1 - KDM4A antisense RNA 1 ncRNA chr4-8057 chr4 121622840 121623050 + 7.07 0.000 Intergenic Intergenic 74035 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr15-4434 chr15 45263465 45263675 + 7.07 0.000 intron (NM_004212, intron 5 of 17) intron (NM_004212, intron 5 of 17) 11336 NM_004212 9153 Hs.367833 NM_004212 ENSG00000137860 SLC28A2 CNT2|HCNT2|HsT17153|SPNT1 solute carrier family 28 member 2 protein-coding chr11-6823 chr11 94766918 94767128 + 7.07 0.000 Intergenic Intergenic -1333 NM_130847 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chrX-2269 chrX 48700804 48701014 + 7.07 0.000 intron (NM_003173, intron 3 of 5) MamRep38|DNA|hAT 4175 NM_003173 6839 Hs.522639 NM_003173 ENSG00000101945 SUV39H1 H3-K9-HMTase 1|KMT1A|MG44|SUV39H suppressor of variegation 3-9 homolog 1 protein-coding chr11-5867 chr11 10436531 10436741 + 7.07 0.000 Intergenic MLT1J2-int|LTR|ERVL-MaLR -13685 NM_001172431 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr16-2021 chr16 4662741 4662951 + 7.07 0.000 intron (NM_001142290, intron 5 of 16) intron (NM_001142290, intron 5 of 16) -8472 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr11-3744 chr11 35180215 35180425 + 7.07 0.000 exon (NM_001202556, exon 3 of 8) exon (NM_001202556, exon 3 of 8) 17370 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr4-3259 chr4 93034512 93034722 + 7.07 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 730218 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr4-7424 chr4 66514583 66514793 + 7.07 0.000 Intergenic MamRTE1|LINE|RTE-BovB 237864 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr5-7316 chr5 15775196 15775406 + 7.07 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -159881 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr5-7774 chr5 62906269 62906479 + 7.07 0.000 Intergenic Intergenic 327555 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chrX-2871 chrX 144000902 144001112 + 7.07 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR 116936 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr1-9982 chr1 82211678 82211888 + 7.07 0.000 Intergenic L2c|LINE|L2 409330 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr5-5169 chr5 110016604 110016814 + 7.07 0.000 Intergenic Intergenic 133527 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr11-5736 chr11 2451270 2451480 + 7.07 0.000 intron (NM_000218, intron 1 of 15) MER1B|DNA|hAT-Charlie 6384 NM_000218 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr7-2611 chr7 155344923 155345133 + 7.07 0.000 Intergenic CpG 22905 NR_103545 338436 Hs.521326 NR_103545 ENSG00000204960 BLACE - B cell acute lymphoblastic leukemia expressed ncRNA chr5-7508 chr5 35856868 35857078 + 7.07 0.000 promoter-TSS (NM_002185) promoter-TSS (NM_002185) 82 NM_002185 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr13-2333 chr13 33717891 33718101 + 7.07 0.000 Intergenic L1MD2|LINE|L1 -41202 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr8-5352 chr8 17955817 17956027 + 7.07 0.000 TTS (NM_001352660) TTS (NM_001352660) 32934 NR_148032 5108 Hs.491148 NM_006197 ENSG00000078674 PCM1 PTC4|RET/PCM-1 pericentriolar material 1 protein-coding chr5-8643 chr5 139892704 139892914 + 7.07 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 97001 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr5-5667 chr5 159248129 159248339 + 7.07 0.000 Intergenic MER33|DNA|hAT-Charlie -15056 NM_145049 134510 Hs.591733 NM_145049 ENSG00000164332 UBLCP1 CPUB1 ubiquitin like domain containing CTD phosphatase 1 protein-coding chr10-4353 chr10 32040992 32041202 + 7.07 0.000 intron (NM_004521, intron 2 of 25) AluSz6|SINE|Alu 15328 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr2-7986 chr2 65930941 65931151 + 7.07 0.000 Intergenic Intergenic 427282 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chrX-2594 chrX 105215727 105215937 + 7.07 0.000 intron (NM_017416, intron 3 of 10) L1PA8|LINE|L1 4861 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chrX-2497 chrX 92126307 92126517 + 7.07 0.000 intron (NM_001168362, intron 2 of 4) AluSp|SINE|Alu 290951 NM_001168362 27328 Hs.655673 NM_014522 ENSG00000102290 PCDH11X PCDH-X|PCDH-Y|PCDH11|PCDH11Y|PCDH22|PCDHX|PPP1R119 protocadherin 11 X-linked protein-coding chr7-8940 chr7 96716849 96717059 + 7.07 0.000 Intergenic L1MB1|LINE|L1 -7063 NM_006304 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr7-9532 chr7 139920875 139921085 + 7.07 0.000 intron (NM_001314028, intron 4 of 12) L3|LINE|CR1 91716 NM_001166253 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr14-3736 chr14 34926317 34926527 + 7.07 0.000 intron (NR_151701, intron 2 of 4) L3|LINE|CR1 -13500 NR_002937 280655 Hs.639271 NR_002937 IGBP1P1 C14orf19 immunoglobulin (CD79A) binding protein 1 pseudogene 1 pseudo chr9-5438 chr9 97296456 97296666 + 7.07 0.000 non-coding (NR_036526, exon 16 of 16) non-coding (NR_036526, exon 16 of 16) -10776 NM_001348010 100499483 Hs.435629 NM_020893 ENSG00000197816 CCDC180 C9orf174 coiled-coil domain containing 180 protein-coding chr1-9477 chr1 36328149 36328359 + 7.07 0.000 Intergenic Intergenic -4100 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr1-16079 chr1 202790789 202790999 + 7.07 0.000 intron (NM_001314042, intron 1 of 27) MLT1A1|LTR|ERVL-MaLR 18576 NM_001314042 10765 Hs.18891 NM_006618 ENSG00000117139 KDM5B CT31|JARID1B|MRT65|PLU-1|PLU1|PPP1R98|PUT1|RBBP2H1A|RBP2-H1 lysine demethylase 5B protein-coding chr5-5892 chr5 27472868 27473078 + 7.07 0.000 intron (NR_038848, intron 1 of 4) MER61-int|LTR|ERV1 681 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr2-13911 chr2 182181749 182181959 + 7.07 0.000 intron (NM_001258313, intron 13 of 13) L1PA10|LINE|L1 60209 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr1-13885 chr1 21692246 21692456 + 7.07 0.000 intron (NM_001330394, intron 22 of 25) intron (NM_001330394, intron 22 of 25) -22994 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr13-1846 chr13 108501815 108502025 + 7.07 0.000 Intergenic Intergenic -93985 NM_015011 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr1-10755 chr1 200205249 200205459 + 7.07 0.000 Intergenic L2c|LINE|L2 162529 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr1-15154 chr1 106557632 106557842 + 7.07 0.000 Intergenic L1MA3|LINE|L1 -260502 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr11-10421 chr11 115579620 115579830 + 7.07 0.000 Intergenic LTR79|LTR|ERVL -75310 NM_014333 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr3-7438 chr3 123389843 123390053 + 7.07 0.000 intron (NM_183357, intron 1 of 20) intron (NM_183357, intron 1 of 20) 26394 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chrX-2341 chrX 63613286 63613496 + 7.07 0.000 Intergenic L1PA7|LINE|L1 -52296 NR_152610 92249 Hs.31532 NR_015353 ENSG00000235437 LINC01278 - long intergenic non-protein coding RNA 1278 ncRNA chr2-13192 chr2 121152018 121152228 + 7.07 0.000 Intergenic Intergenic 133079 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr1-11889 chr1 46062754 46062964 + 7.07 0.000 intron (NR_137329, intron 4 of 8) FLAM_A|SINE|Alu 67814 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr11-10297 chr11 106389188 106389398 + 7.07 0.000 Intergenic LTR8B|LTR|ERV1 137886 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr3-9268 chr3 40546851 40547061 + 7.07 0.000 Intergenic Intergenic 21996 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr15-4197 chr15 24949433 24949643 + 7.07 0.000 intron (NM_001349456, intron 4 of 12) AluJr|SINE|Alu -5355 NM_003097 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr22-4009 chr22 39686458 39686668 + 7.07 0.000 3' UTR (NM_021096, exon 37 of 37) 3' UTR (NM_021096, exon 37 of 37) 115810 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr14-3323 chr14 88199621 88199831 + 6.95 0.000 intron (NM_138317, intron 4 of 6) intron (NM_138317, intron 4 of 6) 71185 NM_138318 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr1-15326 chr1 119512385 119512595 + 6.95 0.000 intron (NM_001328615, intron 3 of 3) intron (NM_001328615, intron 3 of 3) 5280 NM_000862 3283 Hs.364941 NM_000862 ENSG00000203857 HSD3B1 3BETAHSD|HSD3B|HSDB3|HSDB3A|SDR11E1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 protein-coding chrX-3408 chrX 9766940 9767150 + 6.95 0.000 Intergenic Intergenic -1198 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr3-9927 chr3 87901288 87901498 + 6.95 0.000 intron (NM_001322210, intron 2 of 2) MLT1B|LTR|ERVL-MaLR -81183 NM_000866 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr14-4611 chr14 52492633 52492843 + 6.95 0.000 intron (NM_001160047, intron 9 of 20) intron (NM_001160047, intron 9 of 20) 59767 NM_020784 57544 Hs.532609 NM_020784 ENSG00000087301 TXNDC16 ERp90|KIAA1344 thioredoxin domain containing 16 protein-coding chr5-3947 chr5 1772752 1772962 + 6.95 0.000 Intergenic Intergenic 26980 NM_032479 64979 Hs.719465 NM_032479 ENSG00000171421 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding chr3-7815 chr3 99643179 99643389 + 6.95 0.000 intron (NM_020351, intron 1 of 3) intron (NM_020351, intron 1 of 3) 4690 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr12-8118 chr12 119975664 119975874 + 6.95 0.000 Intergenic AluJb|SINE|Alu -13467 NM_001367886 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chr5-2913 chr5 132839794 132840004 + 6.95 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -9252 NM_001172700 134549 Hs.519574 NM_133456 ENSG00000164403 SHROOM1 APXL2 shroom family member 1 protein-coding chr11-7718 chr11 72468339 72468549 + 6.95 0.000 Intergenic AluSg|SINE|Alu -33760 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr1-6339 chr1 5748045 5748255 + 6.95 0.000 Intergenic Intergenic 114591 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr15-4974 chr15 79465853 79466063 + 6.95 0.000 intron (NM_015206, intron 3 of 3) intron (NM_015206, intron 3 of 3) 33442 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr13-1592 chr13 40667134 40667344 + 6.95 0.000 promoter-TSS (NM_002015) promoter-TSS (NM_002015) -598 NM_002015 2308 Hs.370666 NM_002015 ENSG00000150907 FOXO1 FKH1|FKHR|FOXO1A forkhead box O1 protein-coding chr8-7080 chr8 117575222 117575432 + 6.95 0.000 Intergenic MER103C|DNA|hAT-Charlie 54614 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr8-6268 chr8 41630646 41630856 + 6.95 0.000 Intergenic Intergenic 16608 NM_152568 157848 NM_152568 ENSG00000165066 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding chr2-8658 chr2 147884761 147884971 + 6.95 0.000 intron (NM_001278579, intron 2 of 11) intron (NM_001278579, intron 2 of 11) 39837 NM_001616 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr14-4177 chr14 81311201 81311411 + 6.95 0.000 intron (NM_001366850, intron 5 of 7) (CTCTG)n|Simple_repeat|Simple_repeat -89916 NM_201595 2957 Hs.592334 NM_015859 ENSG00000165417 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA subunit 1 protein-coding chr2-9527 chr2 238462946 238463156 + 6.95 0.000 Intergenic L1MB7|LINE|L1 36124 NM_001330196 51665 Hs.516788 NM_016114 ENSG00000065802 ASB1 ASB-1 ankyrin repeat and SOCS box containing 1 protein-coding chr2-12382 chr2 53168575 53168785 + 6.95 0.000 Intergenic Intergenic -466065 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr18-2711 chr18 63731397 63731607 + 6.95 0.000 Intergenic L1MA2|LINE|L1 -21545 NM_001040147 8710 Hs.138202 NM_003784 ENSG00000166396 SERPINB7 MEGSIN|PPKN|TP55 serpin family B member 7 protein-coding chr8-6762 chr8 91703250 91703460 + 6.95 0.000 Intergenic L1MA1|LINE|L1 314325 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr3-5498 chr3 194177704 194177914 + 6.95 0.000 Intergenic Intergenic 28498 NR_125404 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chrX-899 chrX 96704872 96705082 + 6.95 0.000 intron (NM_007309, intron 1 of 26) AluSg|SINE|Alu 20135 NM_006729 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr17-8387 chr17 75068610 75068820 + 6.95 0.000 Intergenic AluSq2|SINE|Alu -19050 NM_001271765 9121 Hs.592095 NM_004695 ENSG00000170190 SLC16A5 MCT5|MCT6 solute carrier family 16 member 5 protein-coding chr16-7021 chr16 87997958 87998168 + 6.95 0.000 intron (NM_017869, intron 4 of 11) intron (NM_017869, intron 4 of 11) 28045 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr8-4868 chr8 51980636 51980846 + 6.95 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -81555 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr14-3439 chr14 99192001 99192211 + 6.95 0.000 intron (NM_022898, intron 2 of 2) intron (NM_022898, intron 2 of 2) 80091 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr1-15957 chr1 191484290 191484500 + 6.95 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -255897 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr11-8137 chr11 48227464 48227674 + 6.95 0.000 Intergenic Intergenic 10759 NM_001005470 119765 Hs.553566 NM_001005470 ENSG00000175619 OR4B1 OR11-106|OST208 olfactory receptor family 4 subfamily B member 1 protein-coding chr11-7520 chr11 8914115 8914325 + 6.95 0.000 intron (NM_020642, intron 3 of 5) intron (NM_020642, intron 3 of 5) 3031 NM_001206647 56672 Hs.131180 NM_020642 ENSG00000166452 AKIP1 BCA3|C11orf17 A-kinase interacting protein 1 protein-coding chr4-5484 chr4 72312058 72312268 + 6.95 0.000 intron (NM_014243, intron 13 of 21) intron (NM_014243, intron 13 of 21) 257058 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr15-2042 chr15 52890016 52890226 + 6.95 0.000 Intergenic L2a|LINE|L2 -99785 NM_004498 3175 Hs.555318 NM_004498 ENSG00000169856 ONECUT1 HNF-6|HNF6|HNF6A one cut homeobox 1 protein-coding chr4-8312 chr4 144712003 144712213 + 6.95 0.000 intron (NM_022475, intron 8 of 12) intron (NM_022475, intron 8 of 12) 65952 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr6-4828 chr6 82449961 82450171 + 6.95 0.000 Intergenic Intergenic 85822 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chrX-3694 chrX 109890174 109890384 + 6.95 0.000 Intergenic Intergenic 19878 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr9-5833 chr9 129998805 129999015 + 6.95 0.000 intron (NM_001363755, intron 1 of 15) intron (NM_001363755, intron 1 of 15) 44279 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr3-7392 chr3 86518829 86519039 + 6.95 0.000 Intergenic Intergenic 36991 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr3-10089 chr3 109753742 109753952 + 6.95 0.000 Intergenic L1PA13|LINE|L1 151019 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr12-4251 chr12 113650650 113650860 + 6.95 0.000 Intergenic Intergenic 122928 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr7-4146 chr7 78059910 78060120 + 6.95 0.000 intron (NM_001301128, intron 20 of 20) intron (NM_001301128, intron 20 of 20) 219885 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr2-14626 chr2 234596537 234596747 + 6.95 0.000 Intergenic L4_A_Mam|LINE|RTE-X -86026 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr10-6463 chr10 33263305 33263515 + 6.95 0.000 intron (NM_001244973, intron 4 of 16) MIR3|SINE|MIR 71257 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr11-1937 chr11 77748111 77748321 + 6.95 0.000 intron (NM_016578, intron 2 of 15) intron (NM_016578, intron 2 of 15) 72618 NM_016578 51773 Hs.420229 NM_016578 ENSG00000048649 RSF1 HBXAP|RSF-1|XAP8|p325 remodeling and spacing factor 1 protein-coding chr11-3620 chr11 72181681 72181891 + 6.95 0.000 Intergenic Intergenic -7923 NM_016724 2348 Hs.73769 NM_000802 ENSG00000110195 FOLR1 FBP|FOLR|FRalpha folate receptor alpha protein-coding chr14-5134 chr14 90355788 90355998 + 6.95 0.000 Intergenic Intergenic -23952 NM_017970 55051 Hs.528131 NM_017970 ENSG00000119720 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding chr2-12192 chr2 41697672 41697882 + 6.95 0.000 Intergenic CpG -179778 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr1-7773 chr1 41508626 41508836 + 6.95 0.000 3' UTR (NM_001127714, exon 8 of 8) 3' UTR (NM_001127714, exon 8 of 8) -24048 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr9-7816 chr9 81474810 81475020 + 6.95 0.000 Intergenic L2c|LINE|L2 214620 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr19-4742 chr19 27946101 27946311 + 6.95 0.000 intron (NR_146733, intron 2 of 6) L1PA6|LINE|L1 -152266 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr10-6590 chr10 82110484 82110694 + 6.95 0.000 intron (NR_163253, intron 2 of 10) L2a|LINE|L2 122331 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr10-8020 chr10 62744132 62744342 + 6.95 0.000 Intergenic Intergenic -60483 NM_032804 84890 Hs.99821 NM_032804 ENSG00000181915 ADO C10orf22 2-aminoethanethiol dioxygenase protein-coding chr21-1176 chr21 42541202 42541412 + 6.95 0.000 intron (NM_001320537, intron 6 of 19) MER1B|DNA|hAT-Charlie 27455 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr13-1292 chr13 35648070 35648280 + 6.95 0.000 intron (NM_001204197, intron 10 of 17) intron (NM_001204197, intron 10 of 17) -49349 NR_132116 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr2-13310 chr2 131004997 131005207 + 6.95 0.000 intron (NM_001367493, intron 4 of 13) intron (NM_001367493, intron 4 of 13) 88060 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr1-13135 chr1 201124855 201125065 + 6.95 0.000 Intergenic Intergenic -9588 NM_001270601 647219 Hs.143949 NM_001270601 ENSG00000232237 ASCL5 bHLHa47 achaete-scute family bHLH transcription factor 5 protein-coding chr5-8486 chr5 132994815 132995025 + 6.95 0.000 Intergenic Intergenic -31286 NM_014423 27125 Hs.519313 NM_014423 ENSG00000072364 AFF4 AF5Q31|CHOPS|MCEF AF4/FMR2 family member 4 protein-coding chrX-3302 chrX 113080134 113080344 + 6.95 0.000 intron (NR_110399, intron 2 of 3) L1PB|LINE|L1 37512 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr2-9360 chr2 227863380 227863590 + 6.95 0.000 Intergenic Intergenic -7891 NM_001330004 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chrX-4904 chrX 107931523 107931733 + 6.95 0.000 TTS (NM_012216) TTS (NM_012216) 4352 NR_110395 101928335 Hs.657090 NR_110395 ENSG00000236064 LOC101928335 - uncharacterized LOC101928335 ncRNA chr13-2329 chr13 33349425 33349635 + 6.95 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -14264 NR_146541 105370154 NR_146541 LINC02344 - long intergenic non-protein coding RNA 2344 ncRNA chrX-1263 chrX 104211780 104211990 + 6.95 0.000 Intergenic L1MEg|LINE|L1 43048 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr22-3690 chr22 24242415 24242625 + 6.95 0.000 intron (NM_001099781, intron 1 of 11) AluSc|SINE|Alu 2622 NM_001099782 2687 Hs.437156 NM_004121 ENSG00000099998 GGT5 GGL|GGT 5|GGT-REL|GGTLA1 gamma-glutamyltransferase 5 protein-coding chr10-8030 chr10 63252476 63252686 + 6.95 0.000 intron (NM_001322252, intron 2 of 24) MLT2D|LTR|ERVL 16642 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr22-956 chr22 41197459 41197669 + 6.95 0.000 promoter-TSS (NR_110514) promoter-TSS (NR_110514) -63 NR_110514 101927279 Hs.517517 NR_110514 EP300-AS1 - EP300 antisense RNA 1 ncRNA chr11-3277 chr11 78310475 78310685 + 6.95 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) 31300 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr19-3831 chr19 11476199 11476409 + 6.95 0.000 intron (NM_032281, intron 1 of 6) AluJo|SINE|Alu 4742 NM_001420 1995 Hs.1701 NM_001420 ENSG00000196361 ELAVL3 HUC|HUCL|PLE21 ELAV like RNA binding protein 3 protein-coding chr20-2730 chr20 49419909 49420119 + 6.95 0.000 intron (NM_004975, intron 1 of 1) L2a|LINE|L2 62654 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr6-4169 chr6 1254750 1254960 + 6.95 0.000 Intergenic Intergenic -57243 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr20-2825 chr20 59406729 59406939 + 6.95 0.000 Intergenic Intergenic 106223 NM_001302455 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding chr8-6587 chr8 71695201 71695411 + 6.95 0.000 Intergenic L2c|LINE|L2 -147212 NM_001370336 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr10-8442 chr10 86290174 86290384 + 6.95 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) -25491 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr2-5295 chr2 69222136 69222346 + 6.95 0.000 intron (NM_032208, intron 17 of 17) intron (NM_032208, intron 17 of 17) 118559 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr2-6969 chr2 127274231 127274441 + 6.95 0.000 intron (NM_001303418, intron 10 of 14) AluSx1|SINE|Alu 19808 NM_001303418 2071 Hs.469872 NM_000122 ENSG00000163161 ERCC3 BTF2|GTF2H|RAD25|TFIIH|TTD2|XPB ERCC excision repair 3, TFIIH core complex helicase subunit protein-coding chrX-4035 chrX 17768133 17768343 + 6.95 0.000 Intergenic Intergenic 30745 NM_001037536 6322 Hs.109655 NM_006746 ENSG00000047634 SCML1 - Scm polycomb group protein like 1 protein-coding chr19-5776 chr19 31389388 31389598 + 6.95 0.000 Intergenic Intergenic -40057 NR_138034 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr1-15313 chr1 118672673 118672883 + 6.95 0.000 Intergenic Intergenic 315565 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr1-4766 chr1 10186864 10187074 + 6.95 0.000 Intergenic MLT1G1-int|LTR|ERVL-MaLR -23601 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr16-6661 chr16 69391401 69391611 + 6.95 0.000 Intergenic AluSz6|SINE|Alu -5499 NM_005652 7014 Hs.63335 NM_005652 ENSG00000132604 TERF2 TRBF2|TRF2 telomeric repeat binding factor 2 protein-coding chr1-10033 chr1 88733210 88733420 + 6.95 0.000 intron (NM_001320708, intron 1 of 20) L1M2|LINE|L1 -48111 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr17-3192 chr17 82179566 82179776 + 6.95 0.000 intron (NM_198082, intron 8 of 16) intron (NM_198082, intron 8 of 16) 33171 NM_001367828 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr5-3556 chr5 52518282 52518492 + 6.95 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -269529 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr3-8846 chr3 9221851 9222061 + 6.95 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) 5061 NR_103443 100288831 Hs.694646 NR_103443 ENSG00000227929 SRGAP3-AS3 - SRGAP3 antisense RNA 3 ncRNA chr14-3747 chr14 40188272 40188482 + 6.95 0.000 Intergenic L1ME4a|LINE|L1 -755877 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr16-6768 chr16 76920129 76920339 + 6.95 0.000 Intergenic L2a|LINE|L2 51298 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr1-9002 chr1 10791000 10791210 + 6.95 0.000 intron (NM_001079843, intron 1 of 20) intron (NM_001079843, intron 1 of 20) 5541 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr5-7346 chr5 17228641 17228851 + 6.95 0.000 intron (NM_006317, intron 1 of 1) intron (NM_006317, intron 1 of 1) 11115 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr7-7191 chr7 12458737 12458947 + 6.95 0.000 Intergenic Intergenic -37587 NR_136261 102725191 Hs.602382 NR_136261 ENSG00000226690 LOC102725191 - uncharacterized LOC102725191 ncRNA chr9-6148 chr9 36899075 36899285 + 6.95 0.000 intron (NR_103999, intron 6 of 8) intron (NR_103999, intron 6 of 8) -5649 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr1-12025 chr1 107348227 107348437 + 6.95 0.000 intron (NM_001113226, intron 2 of 6) AluSz6|SINE|Alu 200263 NM_001113228 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr6-8588 chr6 166112648 166112858 + 6.95 0.000 Intergenic Intergenic 15033 NR_147704 729681 Hs.520550 NR_147704 LOC729681 - uncharacterized LOC729681 ncRNA chr11-3408 chr11 3866023 3866233 + 6.95 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 10066 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr14-3856 chr14 78254004 78254214 + 6.95 0.000 intron (NR_073547, intron 2 of 20) intron (NR_073547, intron 2 of 20) 83736 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr13-2889 chr13 112785320 112785530 + 6.95 0.000 intron (NM_032189, intron 2 of 28) intron (NM_032189, intron 2 of 28) -30694 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr13-4045 chr13 74217921 74218131 + 6.95 0.000 Intergenic Intergenic -13418 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr7-8116 chr7 26556277 26556487 + 6.95 0.000 Intergenic Intergenic -17557 NR_022006 9808 Hs.69749 NM_014769 ENSG00000122548 KIAA0087 - KIAA0087 lncRNA ncRNA chr6-5485 chr6 162601117 162601327 + 6.95 0.000 intron (NM_004562, intron 1 of 11) MSTD|LTR|ERVL-MaLR -125910 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr2-11714 chr2 10137545 10137755 + 6.95 0.000 Intergenic Intergenic -3732 NR_161344 348738 Hs.454981 NR_161344 ENSG00000171848 C2orf48 - chromosome 2 open reading frame 48 ncRNA chr8-4503 chr8 119792397 119792607 + 6.95 0.000 intron (NM_003184, intron 10 of 25) L1ME3G|LINE|L1 40339 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr3-5262 chr3 111299140 111299350 + 6.95 0.000 Intergenic L1MA3|LINE|L1 227429 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr1-15851 chr1 181344660 181344870 + 6.95 0.000 Intergenic Intergenic 108377 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr10-4799 chr10 7767252 7767462 + 6.95 0.000 intron (NM_012311, intron 8 of 12) intron (NM_012311, intron 8 of 12) 20636 NM_012311 22944 Hs.397918 NM_012311 ENSG00000151657 KIN BTCD|KIN17|Rts2 Kin17 DNA and RNA binding protein protein-coding chr2-12717 chr2 79993337 79993547 + 6.95 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -126859 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr4-7559 chr4 78369765 78369975 + 6.95 0.000 exon (NM_025074, exon 23 of 74) exon (NM_025074, exon 23 of 74) 80885 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr2-9350 chr2 227151890 227152100 + 6.95 0.000 intron (NM_000092, intron 1 of 47) Charlie2b|DNA|hAT-Charlie 12564 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr16-4748 chr16 84761912 84762122 + 6.95 0.000 intron (NR_073577, intron 6 of 11) intron (NR_073577, intron 6 of 11) -57968 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr1-9343 chr1 28675498 28675708 + 6.95 0.000 intron (NM_024482, intron 1 of 9) AluSz6|SINE|Alu 6819 NM_024482 10691 Hs.632373 NM_006582 ENSG00000162419 GMEB1 P96PIF|PIF96 glucocorticoid modulatory element binding protein 1 protein-coding chr1-6659 chr1 47681041 47681251 + 6.95 0.000 Intergenic Intergenic -243829 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr8-4469 chr8 117037928 117038138 + 6.95 0.000 intron (NM_001172813, intron 2 of 10) intron (NM_001172813, intron 2 of 10) 87058 NM_001172813 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr12-6854 chr12 16542139 16542349 + 6.95 0.000 Intergenic Intergenic 63135 NM_001243611 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding chr3-3522 chr3 31509314 31509524 + 6.95 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -23506 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr9-6783 chr9 27528521 27528731 + 6.95 0.000 intron (NM_024761, intron 1 of 3) CpG 1188 NM_024761 79817 Hs.369022 NM_024761 ENSG00000120162 MOB3B C9orf35|MOB1D|MOBKL2B MOB kinase activator 3B protein-coding chr11-9904 chr11 75009426 75009636 + 6.95 0.000 3' UTR (NM_001367864, exon 2 of 2) 3' UTR (NM_001367864, exon 2 of 2) 20598 NM_001367862 10825 Hs.191074 NM_006656 ENSG00000162139 NEU3 SIAL3 neuraminidase 3 protein-coding chr20-2479 chr20 32673275 32673485 + 6.95 0.000 intron (NM_182584, intron 1 of 5) intron (NM_182584, intron 1 of 5) 561 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr2-13654 chr2 161416832 161417042 + 6.95 0.000 exon (NM_006593, exon 1 of 6) exon (NM_006593, exon 1 of 6) 640 NM_006593 10716 Hs.210862 NM_006593 ENSG00000136535 TBR1 IDDAS|TBR-1|TES-56 T-box brain transcription factor 1 protein-coding chr15-1768 chr15 66838877 66839087 + 6.95 0.000 Intergenic MER2|DNA|TcMar-Tigger 117533 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chrX-5235 chrX 136571004 136571214 + 6.95 0.000 Intergenic Intergenic 20231 NR_030631 100126324 NR_030631 ENSG00000216060 MIR934 MIRN934|hsa-mir-934|mir-934 microRNA 934 ncRNA chr5-4976 chr5 79328133 79328343 + 6.95 0.000 Intergenic AluSz|SINE|Alu 92107 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr8-1818 chr8 123315290 123315500 + 6.95 0.000 Intergenic SVA_D|Retroposon|SVA -32639 NR_037516 100500863 NR_037516 ENSG00000207704 MIR548AA1 - microRNA 548aa-1 ncRNA chr2-7221 chr2 219492236 219492446 + 6.95 0.000 intron (NM_005876, intron 40 of 40) intron (NM_005876, intron 40 of 40) -4014 NM_001286811 100996693 Hs.21639 NM_001286811 ENSG00000286095 SPEGNB - SPEG neighbor protein-coding chr7-1748 chr7 35801601 35801811 + 6.95 0.000 intron (NM_001788, intron 1 of 12) CpG 487 NM_001363715 989 Hs.191346 NM_001788 ENSG00000122545 SEPTIN7 CDC10|CDC3|NBLA02942|SEPT7|SEPT7A septin 7 protein-coding chr1-14983 chr1 90067257 90067467 + 6.95 0.000 Intergenic Intergenic 72252 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr17-6237 chr17 20010164 20010374 + 6.95 0.000 intron (NM_001243439, intron 1 of 14) intron (NM_001243439, intron 1 of 14) 910 NM_001243439 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr19-4795 chr19 34547957 34548167 + 6.95 0.000 Intergenic MER3|DNA|hAT-Charlie -2676 NR_146880 100129800 NR_146880 ZNF807 ZNF181P1|ZNF807P zinc finger protein 807 pseudo chr18-3054 chr18 29947122 29947332 + 6.95 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -351683 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr20-2751 chr20 50772728 50772938 + 6.95 0.000 Intergenic L1ME4b|LINE|L1 -22061 NM_001010974 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr8-4271 chr8 94115591 94115801 + 6.95 0.000 Intergenic Intergenic 92859 NM_004063 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding chr6-6060 chr6 135888202 135888412 + 6.95 0.000 intron (NM_018945, intron 1 of 12) MIR|SINE|MIR 36606 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr18-2565 chr18 7240188 7240398 + 6.95 0.000 Intergenic MER77|LTR|ERVL 9189 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr20-3517 chr20 63813906 63814116 + 6.95 0.000 intron (NR_110081, intron 1 of 2) AluY|SINE|Alu 5935 NR_110081 101928604 Hs.676054 NR_110081 ZBTB46-AS1 - ZBTB46 antisense RNA 1 ncRNA chrX-5417 chrX 153460048 153460258 + 6.95 0.000 intron (NM_017518, intron 4 of 9) L1MB5|LINE|L1 10478 NM_017518 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr21-1134 chr21 38356061 38356271 + 6.95 0.000 Intergenic Intergenic -10090 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr20-3635 chr20 8852279 8852489 + 6.95 0.000 intron (NM_182734, intron 32 of 32) intron (NM_182734, intron 32 of 32) 21199 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr5-6958 chr5 141990381 141990591 + 6.95 0.000 TTS (NM_004290) TTS (NM_004290) 21381 NM_004290 9604 Hs.483616 NM_004290 ENSG00000013561 RNF14 ARA54|HFB30|HRIHFB2038|TRIAD2 ring finger protein 14 protein-coding chr1-16191 chr1 207282073 207282283 + 6.95 0.000 Intergenic Intergenic -39500 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr18-1919 chr18 33709947 33710157 + 6.95 0.000 intron (NM_030632, intron 8 of 11) AluSp|SINE|Alu 131833 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr1-14320 chr1 39659711 39659921 + 6.95 0.000 intron (NM_032526, intron 5 of 5) MamRep1894|DNA|hAT 12222 NM_032526 84618 Hs.307006 NM_032526 ENSG00000116981 NT5C1A CN-I|CN-IA|CN1|CN1A|CNI 5'-nucleotidase, cytosolic IA protein-coding chr9-4427 chr9 13387215 13387425 + 6.95 0.000 Intergenic Intergenic 44009 NR_033863 401492 Hs.632651 NR_033863 ENSG00000270547 LINC01235 - long intergenic non-protein coding RNA 1235 ncRNA chr6-8484 chr6 156898449 156898659 + 6.95 0.000 intron (NM_020732, intron 3 of 19) intron (NM_020732, intron 3 of 19) -118823 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr7-9396 chr7 131285658 131285868 + 6.95 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 42016 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr11-10164 chr11 93303009 93303219 + 6.95 0.000 Intergenic L1PA12|LINE|L1 -27603 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr13-3575 chr13 26785875 26786085 + 6.95 0.000 Intergenic LTR1A2|LTR|ERV1 -25194 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr1-6774 chr1 78409082 78409292 + 6.95 0.000 Intergenic L1PREC2|LINE|L1 -81787 NM_001039585 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr12-5885 chr12 53415858 53416068 + 6.95 0.000 3' UTR (NM_001251825, exon 6 of 6) 3' UTR (NM_001251825, exon 6 of 6) -7892 NM_001164691 269 Hs.659889 NM_020547 ENSG00000135409 AMHR2 AMHR|MISR2|MISRII|MRII anti-Mullerian hormone receptor type 2 protein-coding chr3-6425 chr3 101624814 101625024 + 6.95 0.000 Intergenic Intergenic 50739 NM_020357 57092 Hs.732633 NM_020357 ENSG00000081154 PCNP - PEST proteolytic signal containing nuclear protein protein-coding chr10-8125 chr10 69768899 69769109 + 6.95 0.000 Intergenic Intergenic -32902 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr9-6001 chr9 134946991 134947201 + 6.95 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -29184 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr5-7382 chr5 21905242 21905452 + 6.95 0.000 intron (NM_004061, intron 6 of 14) intron (NM_004061, intron 6 of 14) -15500 NM_001364109 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr8-5879 chr8 15397909 15398119 + 6.95 0.000 Intergenic Intergenic -142073 NM_178234 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr17-8084 chr17 55137731 55137941 + 6.95 0.000 intron (NM_178509, intron 16 of 17) L1ME4b|LINE|L1 -127124 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr8-7163 chr8 123182460 123182670 + 6.95 0.000 promoter-TSS (NM_001288587) promoter-TSS (NM_001288587) -100 NM_001288587 84985 Hs.379821 NM_032899 ENSG00000147689 FAM83A BJ-TSA-9 family with sequence similarity 83 member A protein-coding chr19-6255 chr19 7463174 7463384 + 6.95 0.000 intron (NM_001130955, intron 11 of 19) L2c|LINE|L2 23591 NM_001130955 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr19-4211 chr19 46595665 46595875 + 6.95 0.000 intron (NM_001370550, intron 1 of 2) AluSz|SINE|Alu 5146 NM_001370551 100506012 Hs.671661 NM_001205281 ENSG00000230510 PPP5D1 - PPP5 tetratricopeptide repeat domain containing 1 protein-coding chr12-4083 chr12 54859554 54859764 + 6.95 0.000 Intergenic Intergenic 5143 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr13-3161 chr13 100235199 100235409 + 6.95 0.000 intron (NR_148031, intron 7 of 22) A-rich|Low_complexity|Low_complexity 146211 NM_001352606 5095 Hs.80741 NM_000282 ENSG00000175198 PCCA - propionyl-CoA carboxylase subunit alpha protein-coding chr7-8039 chr7 20440146 20440356 + 6.95 0.000 Intergenic LTR1C|LTR|ERV1 -108489 NR_110120 101927811 Hs.285724 NR_110119 ENSG00000271133 LOC101927811 - uncharacterized LOC101927811 ncRNA chr17-8229 chr17 64808544 64808754 + 6.95 0.000 intron (NR_024386, intron 4 of 10) intron (NR_024386, intron 4 of 10) 13453 NR_036199 100423004 NR_036199 ENSG00000284055 MIR4315-1 - microRNA 4315-1 ncRNA chr5-8726 chr5 144597652 144597862 + 6.95 0.000 Intergenic Intergenic 392366 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr6-4707 chr6 56746035 56746245 + 6.95 0.000 intron (NM_001144770, intron 2 of 94) AluJr|SINE|Alu 97525 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr18-1997 chr18 41128169 41128379 + 6.95 0.000 Intergenic Intergenic 392403 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr7-3413 chr7 136179027 136179237 + 6.95 0.000 Intergenic Intergenic -201773 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr22-3640 chr22 21990629 21990839 + 6.95 0.000 TTS (NR_135291) TTS (NR_135291) -7947 NM_001349848 8940 Hs.436401 NM_003935 ENSG00000100038 TOP3B TOP3B1 DNA topoisomerase III beta protein-coding chr1-15324 chr1 119456058 119456268 + 6.95 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 41013 NM_000198 3284 Hs.654399 NM_000198 ENSG00000203859 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding chr13-4243 chr13 96286075 96286285 + 6.95 0.000 intron (NM_153456, intron 1 of 1) MLT1K|LTR|ERVL-MaLR -141049 NR_039723 100616137 NR_039723 ENSG00000283487 MIR4501 - microRNA 4501 ncRNA chr8-3702 chr8 18740040 18740250 + 6.95 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 68722 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr1-15221 chr1 110927358 110927568 + 6.95 0.000 Intergenic MLT2F|LTR|ERVL 36459 NM_018372 55791 Hs.25245 NM_018372 ENSG00000121931 LRIF1 C1orf103|HBiX1|RIF1 ligand dependent nuclear receptor interacting factor 1 protein-coding chr10-6939 chr10 58323169 58323379 + 6.95 0.000 Intergenic Intergenic 6405 NR_158219 112268068 Hs.586671 NR_158219 LOC112268068 - uncharacterized LOC112268068 ncRNA chr11-10714 chr11 131157952 131158162 + 6.95 0.000 Intergenic Intergenic -212558 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr11-10356 chr11 111285317 111285527 + 6.95 0.000 intron (NM_198498, intron 4 of 4) intron (NM_198498, intron 4 of 4) -13124 NM_001271458 120376 Hs.31409 NM_001136105 ENSG00000214290 COLCA2 C11orf93|CASC13|LOH11CR1G colorectal cancer associated 2 protein-coding chr4-8042 chr4 120426654 120426864 + 6.95 0.000 Intergenic Intergenic -359911 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr8-6682 chr8 81374467 81374677 + 6.95 0.000 Intergenic L2a|LINE|L2 72867 NM_002677 5375 Hs.571512 NM_002677 ENSG00000147588 PMP2 CMT1G|FABP8|M-FABP|MP2|P2 peripheral myelin protein 2 protein-coding chr6-8238 chr6 137093338 137093548 + 6.95 0.000 Intergenic Intergenic -48263 NM_001278723 53832 Hs.445868 NM_014432 ENSG00000016402 IL20RA CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA interleukin 20 receptor subunit alpha protein-coding chr6-5599 chr6 38714319 38714529 + 6.95 0.000 promoter-TSS (NM_001206927) promoter-TSS (NM_001206927) -887 NM_001206927 1769 Hs.520106 NM_001371 ENSG00000124721 DNAH8 ATPase|hdhc9 dynein axonemal heavy chain 8 protein-coding chr3-6601 chr3 126052531 126052741 + 6.95 0.000 intron (NM_001164475, intron 1 of 9) intron (NM_001164475, intron 1 of 9) 4139 NM_001008487 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chr13-2527 chr13 60504880 60505090 + 6.95 0.000 intron (NM_030794, intron 8 of 13) L1P2|LINE|L1 107765 NM_001146070 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr14-1267 chr14 52885220 52885430 + 6.95 0.000 intron (NM_006832, intron 4 of 14) AluSx|SINE|Alu 65725 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr11-4100 chr11 33835414 33835624 + 6.95 0.000 Intergenic Zaphod2|DNA|hAT-Tip100 34359 NM_001142316 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr3-10189 chr3 119345938 119346148 + 6.95 0.000 intron (NM_020754, intron 1 of 11) intron (NM_020754, intron 1 of 11) -23283 NR_046748 100874246 Hs.607097 NR_046748 ENSG00000241155 ARHGAP31-AS1 - ARHGAP31 antisense RNA 1 ncRNA chr4-8737 chr4 185247131 185247341 + 6.95 0.000 intron (NM_001317781, intron 1 of 18) intron (NM_001317781, intron 1 of 18) 42999 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr7-7462 chr7 90154512 90154722 + 6.95 0.000 intron (NM_012449, intron 1 of 4) CpG 148 NM_012449 26872 Hs.61635 NM_012449 ENSG00000164647 STEAP1 PRSS24|STEAP STEAP family member 1 protein-coding chr17-4882 chr17 68069311 68069521 + 6.95 0.000 Intergenic AluJb|SINE|Alu -32139 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr6-1858 chr6 39725465 39725675 + 6.95 0.000 promoter-TSS (NM_145027) promoter-TSS (NM_145027) -147 NM_001351503 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr15-4739 chr15 68479504 68479714 + 6.95 0.000 Intergenic Intergenic -38764 NM_001324014 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr16-4760 chr16 85065204 85065414 + 6.95 0.000 intron (NM_001286565, intron 1 of 12) intron (NM_001286565, intron 1 of 12) 2097 NM_001286565 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chrX-5091 chrX 127020028 127020238 + 6.95 0.000 Intergenic AluSx|SINE|Alu 200404 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr4-5690 chr4 25619955 25620165 + 6.95 0.000 Intergenic AluSx|SINE|Alu -35791 NM_006424 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr5-6914 chr5 134032114 134032324 + 6.95 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -27244 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr16-3068 chr16 58397004 58397214 + 6.95 0.000 intron (NM_001126129, intron 2 of 3) SVA_D|Retroposon|SVA 4638 NM_001126129 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr6-1607 chr6 45938031 45938241 + 6.95 0.000 promoter-TSS (NR_045674) promoter-TSS (NR_045674) -539 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr15-4728 chr15 67915244 67915454 + 6.95 0.000 Intergenic Intergenic -75304 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr17-3702 chr17 17556700 17556910 + 6.95 0.000 intron (NM_148173, intron 2 of 6) intron (NM_148173, intron 2 of 6) 20691 NM_148173 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr8-7391 chr8 139320183 139320393 + 6.95 0.000 Intergenic L1PB2|LINE|L1 382835 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr20-2695 chr20 46971266 46971476 + 6.95 0.000 intron (NM_172110, intron 1 of 13) MLT1J|LTR|ERVL-MaLR 76528 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr7-5672 chr7 65305233 65305443 + 6.95 0.000 Intergenic PABL_B-int|LTR|ERV1 -68461 NM_001287532 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr5-5692 chr5 163146375 163146585 + 6.95 0.000 Intergenic L1PA7|LINE|L1 -291091 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chrX-1968 chrX 9681706 9681916 + 6.95 0.000 intron (NM_001139466, intron 5 of 17) intron (NM_001139466, intron 5 of 17) 84036 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr9-7751 chr9 75925228 75925438 + 6.95 0.000 intron (NR_120409, intron 1 of 19) intron (NR_120409, intron 1 of 19) 34660 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr13-4075 chr13 76715745 76715955 + 6.95 0.000 Intergenic Intergenic 170555 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr6-7863 chr6 106450965 106451175 + 6.95 0.000 TTS (NR_134603) TTS (NR_134603) 6178 NR_134603 105377924 Hs.741855 NR_134603 ENSG00000282408 LOC105377924 - uncharacterized LOC105377924 ncRNA chr16-5901 chr16 2495193 2495403 + 6.95 0.000 intron (NM_020705, intron 1 of 6) AluSz6|SINE|Alu -18428 NM_001198569 527 Hs.389107 NM_001694 ENSG00000185883 ATP6V0C ATP6C|ATP6L|ATPL|VATL|VPPC|Vma3 ATPase H+ transporting V0 subunit c protein-coding chr4-5857 chr4 118981966 118982176 + 6.95 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) 93217 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr9-7448 chr9 26575675 26575885 + 6.95 0.000 Intergenic Intergenic 317022 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr1-14808 chr1 72178255 72178465 + 6.95 0.000 intron (NM_173808, intron 1 of 6) intron (NM_173808, intron 1 of 6) 104179 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr6-5640 chr6 71887236 71887446 + 6.95 0.000 intron (NM_001350412, intron 1 of 2) intron (NM_001350412, intron 1 of 2) 638 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr3-9517 chr3 51957681 51957891 + 6.95 0.000 TTS (NM_080865) TTS (NM_080865) 2405 NM_080865 118442 Hs.232213 NM_080865 ENSG00000180929 GPR62 GPCR8|KPG_005 G protein-coupled receptor 62 protein-coding chr8-7466 chr8 142117706 142117916 + 6.95 0.000 Intergenic MER20|DNA|hAT-Charlie -58528 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chrX-5383 chrX 151019941 151020151 + 6.95 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 36661 NM_001301228 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr10-9139 chr10 128008648 128008858 + 6.95 0.000 intron (NM_001323354, intron 1 of 19) intron (NM_001323354, intron 1 of 19) 10606 NM_001323354 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr4-7569 chr4 78920561 78920771 + 6.95 0.000 non-coding (NR_146462, exon 7 of 7) non-coding (NR_146462, exon 7 of 7) 18772 NM_001040202 152559 Hs.657312 NM_177453 ENSG00000163291 PAQR3 RKTG progestin and adipoQ receptor family member 3 protein-coding chr6-5329 chr6 144790822 144791032 + 6.95 0.000 intron (NM_007124, intron 61 of 73) intron (NM_007124, intron 61 of 73) 385272 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr3-7818 chr3 101512167 101512377 + 6.95 0.000 intron (NM_020654, intron 1 of 23) intron (NM_020654, intron 1 of 23) 940 NM_001077203 57337 Hs.529551 NM_020654 ENSG00000138468 SENP7 - SUMO specific peptidase 7 protein-coding chr5-7926 chr5 78591076 78591286 + 6.95 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 57591 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr1-7479 chr1 93692482 93692692 + 6.95 0.000 intron (NM_001261408, intron 3 of 13) MIRb|SINE|MIR -10750 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr12-7313 chr12 54216729 54216939 + 6.95 0.000 Intergenic Intergenic 14642 NR_039851 100616400 NR_039851 ENSG00000283803 MIR3198-2 mir-3198-2 microRNA 3198-2 ncRNA chr17-4472 chr17 63418945 63419155 + 6.95 0.000 intron (NM_025185, intron 25 of 25) intron (NM_025185, intron 25 of 25) 21217 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr9-5319 chr9 86948640 86948850 + 6.95 0.000 promoter-TSS (NR_049794) promoter-TSS (NR_049794) 47 NR_049794 100506834 Hs.553987 NR_049794 ENSG00000226237 GAS1RR LncRNA-Hh GAS1 adjacent regulatory RNA ncRNA chr17-5933 chr17 75525110 75525320 + 6.95 0.000 promoter-TSS (NM_001031803) promoter-TSS (NM_001031803) -482 NM_004524 3993 Hs.514477 NM_004524 ENSG00000073350 LLGL2 HGL|Hugl-2|LGL2 LLGL scribble cell polarity complex component 2 protein-coding chr10-7510 chr10 13173579 13173789 + 6.95 0.000 intron (NM_018518, intron 5 of 19) intron (NM_018518, intron 5 of 19) 12126 NM_182751 55388 Hs.198363 NM_018518 ENSG00000065328 MCM10 CNA43|DNA43|PRO2249 minichromosome maintenance 10 replication initiation factor protein-coding chr11-4614 chr11 8388196 8388406 + 6.95 0.000 Intergenic Intergenic -119514 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr17-5620 chr17 49052968 49053178 + 6.95 0.000 3' UTR (NM_006546, exon 15 of 15) 3' UTR (NM_006546, exon 15 of 15) 55688 NM_001160423 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chr10-8154 chr10 70910851 70911061 + 6.95 0.000 Intergenic Intergenic -22391 NM_001323004 5092 Hs.3192 NM_000281 ENSG00000166228 PCBD1 DCOH|PCBD|PCD|PHS pterin-4 alpha-carbinolamine dehydratase 1 protein-coding chr6-3565 chr6 56073840 56074050 + 6.95 0.000 intron (NM_030820, intron 20 of 29) intron (NM_030820, intron 20 of 29) 17717 NM_001318753 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr22-2339 chr22 41656524 41656734 + 6.95 0.000 intron (NM_001288976, intron 9 of 12) Tigger7|DNA|TcMar-Tigger 32238 NM_005008 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chr4-3676 chr4 41890084 41890294 + 6.95 0.000 Intergenic Intergenic -7578 NR_104143 101927074 Hs.611425 NR_104143 ENSG00000245870 LINC00682 - long intergenic non-protein coding RNA 682 ncRNA chr15-3348 chr15 82248421 82248631 + 6.95 0.000 intron (NM_001040610, intron 2 of 17) intron (NM_001040610, intron 2 of 17) 14002 NM_001322845 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr5-7140 chr5 2125235 2125445 + 6.95 0.000 Intergenic Intergenic 186861 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr20-1611 chr20 10508443 10508653 + 6.95 0.000 intron (NM_001009608, intron 2 of 7) Tigger15a|DNA|TcMar-Tigger 73243 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr7-3856 chr7 102020795 102021005 + 6.95 0.000 intron (NM_001202544, intron 2 of 21) AluSq2|SINE|Alu 203274 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr9-7681 chr9 70642316 70642526 + 6.95 0.000 intron (NM_001366143, intron 9 of 25) intron (NM_001366143, intron 9 of 25) 167663 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr6-8542 chr6 161225817 161226027 + 6.95 0.000 intron (NM_020133, intron 2 of 8) intron (NM_020133, intron 2 of 8) 48139 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr3-4731 chr3 65907707 65907917 + 6.95 0.000 intron (NR_145422, intron 1 of 2) L2b|LINE|L2 13996 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr10-8101 chr10 68976261 68976471 + 6.95 0.000 intron (NM_001256910, intron 11 of 14) AluY|SINE|Alu -12437 NM_015634 26128 Hs.279580 NM_015634 ENSG00000198954 KIF1BP KBP|KIAA1279|TTC20 KIF1 binding protein protein-coding chr6-6591 chr6 142290081 142290291 + 6.95 0.000 Intergenic FRAM|SINE|Alu -11733 NM_001032394 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr13-2440 chr13 48000739 48000949 + 6.95 0.000 intron (NM_003850, intron 1 of 10) intron (NM_003850, intron 1 of 10) 482 NM_003850 8803 Hs.743361 NM_003850 ENSG00000136143 SUCLA2 A-BETA|A-SCS|MTDPS5|SCS-betaA succinate-CoA ligase ADP-forming beta subunit protein-coding chr1-9514 chr1 38520082 38520292 + 6.95 0.000 Intergenic Chap1_Mam|DNA|hAT-Charlie 44991 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr16-4019 chr16 752479 752689 + 6.95 0.000 Intergenic AluSz|SINE|Alu -8150 NM_005823 10232 Hs.408488 NM_005823 ENSG00000102854 MSLN MPF|SMRP mesothelin protein-coding chr8-6892 chr8 101153753 101153963 + 6.95 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 51815 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr15-2294 chr15 64856883 64857093 + 6.95 0.000 intron (NM_001195059, intron 2 of 4) intron (NM_001195059, intron 2 of 4) 15073 NM_025201 80301 Hs.709337 NM_025201 ENSG00000241839 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing O2 protein-coding chr11-8459 chr11 116172715 116172925 + 6.95 0.000 Intergenic LTR16C|LTR|ERVL -412620 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr5-6053 chr5 178116768 178116978 + 6.95 0.000 intron (NM_015111, intron 1 of 4) intron (NM_015111, intron 1 of 4) 3341 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr6-6877 chr6 11207175 11207385 + 6.95 0.000 intron (NM_182966, intron 2 of 2) intron (NM_182966, intron 2 of 2) 25388 NM_006403 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr3-10755 chr3 156425999 156426209 + 6.95 0.000 intron (NM_172159, intron 2 of 13) intron (NM_172159, intron 2 of 13) 20832 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr6-3332 chr6 2858134 2858344 + 6.95 0.000 intron (NR_033851, intron 1 of 1) intron (NR_033851, intron 1 of 1) -4132 NR_039788 100616285 NR_039788 ENSG00000266750 MIR4645 mir-4645 microRNA 4645 ncRNA chr17-4724 chr17 33191389 33191599 + 6.95 0.000 intron (NM_001094, intron 1 of 9) L1ME1|LINE|L1 101494 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr10-2369 chr10 97125415 97125625 + 6.95 0.000 intron (NM_003061, intron 4 of 36) AluJb|SINE|Alu 22764 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr3-10607 chr3 144921879 144922089 + 6.95 0.000 Intergenic LTR1D|LTR|ERV1 948903 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr14-4636 chr14 54258152 54258362 + 6.95 0.000 Intergenic Intergenic -138611 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr17-6657 chr17 72600904 72601114 + 6.95 0.000 intron (NR_033876, intron 4 of 4) intron (NR_033876, intron 4 of 4) -8205 NR_137280 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr3-5881 chr3 37456053 37456263 + 6.95 0.000 intron (NM_002207, intron 1 of 27) intron (NM_002207, intron 1 of 27) 4017 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr6-6782 chr6 3913206 3913416 + 6.95 0.000 Intergenic MIRb|SINE|MIR 63938 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr20-2768 chr20 51933237 51933447 + 6.95 0.000 Intergenic Intergenic -70429 NR_110016 101927678 Hs.683840 NR_110016 ENSG00000227964 LINC01429 - long intergenic non-protein coding RNA 1429 ncRNA chr15-2449 chr15 77865581 77865791 + 6.95 0.000 Intergenic Intergenic -44786 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr9-5417 chr9 95773610 95773820 + 6.95 0.000 Intergenic Intergenic -101976 NM_020207 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr11-7783 chr11 91735043 91735253 + 6.95 0.000 Intergenic L1PB1|LINE|L1 -489886 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr20-3122 chr20 33035393 33035603 + 6.95 0.000 intron (NM_174897, intron 5 of 14) MIR3|SINE|MIR 3850 NM_174897 128859 Hs.375090 NM_174897 ENSG00000167104 BPIFB6 BPIL3|LPLUNC6 BPI fold containing family B member 6 protein-coding chr2-6055 chr2 131037358 131037568 + 6.95 0.000 intron (NM_001367493, intron 5 of 13) intron (NM_001367493, intron 5 of 13) 55699 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr20-3076 chr20 14264892 14265102 + 6.95 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) 72615 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr3-10154 chr3 115518453 115518663 + 6.95 0.000 Intergenic Intergenic -104952 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr9-3087 chr9 21803115 21803325 + 6.95 0.000 intron (NM_002451, intron 1 of 7) intron (NM_002451, intron 1 of 7) 584 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chrX-3795 chrX 137230034 137230244 + 6.95 0.000 Intergenic Intergenic -198465 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr6-5821 chr6 19691885 19692095 + 6.95 0.000 Intergenic CpG 112769 NR_134651 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr20-4381 chr20 57482602 57482812 + 6.95 0.000 Intergenic Intergenic 42160 NR_072975 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr18-1653 chr18 59865262 59865472 + 6.95 0.000 Intergenic Intergenic -34629 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr2-9668 chr2 29624360 29624570 + 6.95 0.000 intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -149088 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr11-5798 chr11 6003620 6003830 + 6.95 0.000 promoter-TSS (NM_001005179) promoter-TSS (NM_001005179) -533 NM_001005179 120793 Hs.553571 NM_001005179 ENSG00000183389 OR56A4 OR11-49 olfactory receptor family 56 subfamily A member 4 protein-coding chr4-8393 chr4 151112934 151113144 + 6.95 0.000 Intergenic HERVL40-int|LTR|ERVL 9212 NR_000007 8944 NR_000007 ENSG00000208797 SNORD73A RNU73|RNU73A|U73|U73a small nucleolar RNA, C/D box 73A snoRNA chr12-2877 chr12 24780318 24780528 + 6.95 0.000 Intergenic AluJr|SINE|Alu 121799 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr21-1250 chr21 46263988 46264198 + 6.95 0.000 intron (NM_003906, intron 13 of 27) intron (NM_003906, intron 13 of 27) 21518 NM_003906 8888 Hs.389037 NM_003906 ENSG00000160294 MCM3AP GANP|MAP80|PNRIID|SAC3 minichromosome maintenance complex component 3 associated protein protein-coding chr19-4400 chr19 3386796 3387006 + 6.95 0.000 intron (NM_001245002, intron 2 of 10) intron (NM_001245002, intron 2 of 10) 20318 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr10-6068 chr10 129709808 129710018 + 6.95 0.000 intron (NM_002412, intron 3 of 4) intron (NM_002412, intron 3 of 4) 133461 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr7-7266 chr7 31603079 31603289 + 6.95 0.000 intron (NM_194300, intron 8 of 12) intron (NM_194300, intron 8 of 12) 50182 NM_194300 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr7-9317 chr7 128354948 128355158 + 6.95 0.000 intron (NM_001174164, intron 5 of 5) intron (NM_001174164, intron 5 of 5) 6632 NM_001174164 401399 Hs.381096 NM_001114726 ENSG00000224940 PRRT4 - proline rich transmembrane protein 4 protein-coding chr8-4867 chr8 50164050 50164260 + 6.95 0.000 promoter-TSS (NM_001321778) promoter-TSS (NM_001321778) 24 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr10-6941 chr10 60072961 60073171 + 6.95 0.000 exon (NM_020987, exon 37 of 44) exon (NM_020987, exon 37 of 44) 67950 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr20-2550 chr20 36169398 36169608 + 6.95 0.000 intron (NM_012156, intron 1 of 21) intron (NM_012156, intron 1 of 21) -13743 NR_147703 100130373 Hs.570339 NR_147703 LOC100130373 - uncharacterized LOC100130373 ncRNA chr12-6144 chr12 2844252 2844462 + 6.95 0.000 intron (NR_147202, intron 14 of 15) AluSx|SINE|Alu -9322 NM_031474 83714 Hs.530816 NM_031474 ENSG00000053702 NRIP2 - nuclear receptor interacting protein 2 protein-coding chr10-5118 chr10 49691377 49691587 + 6.95 0.000 intron (NM_182554, intron 1 of 2) intron (NM_182554, intron 1 of 2) 11831 NM_001042427 282966 Hs.131287 NM_182554 ENSG00000178645 C10orf53 - chromosome 10 open reading frame 53 protein-coding chr6-5977 chr6 87407732 87407942 + 6.95 0.000 promoter-TSS (NM_001031743) promoter-TSS (NM_001031743) -135 NM_001031743 154313 Hs.82921 NM_178823 ENSG00000272514 CFAP206 C6orf165|dJ382I10.1 cilia and flagella associated protein 206 protein-coding chr3-5564 chr3 4828043 4828253 + 6.95 0.000 intron (NM_001168272, intron 59 of 60) intron (NM_001168272, intron 59 of 60) -76558 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr1-14752 chr1 67707197 67707407 + 6.95 0.000 intron (NM_018841, intron 3 of 3) intron (NM_018841, intron 3 of 3) 22101 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr8-5737 chr8 137879877 137880087 + 6.95 0.000 intron (NR_161374, intron 2 of 7) intron (NR_161374, intron 2 of 7) 203563 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chr16-2638 chr16 23257491 23257701 + 6.95 0.000 Intergenic FLAM_C|SINE|Alu -44706 NM_000336 6338 Hs.414614 NM_000336 ENSG00000168447 SCNN1B BESC1|ENaCb|ENaCbeta|LIDLS1|SCNEB sodium channel epithelial 1 beta subunit protein-coding chr11-7989 chr11 11467573 11467783 + 6.95 0.000 intron (NM_001363464, intron 1 of 9) MER5B|DNA|hAT-Charlie -114428 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr1-14908 chr1 83724011 83724221 + 6.95 0.000 intron (NR_119375, intron 2 of 2) intron (NR_119375, intron 2 of 2) 136430 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr3-9514 chr3 51698768 51698978 + 6.95 0.000 intron (NR_024012, intron 2 of 3) intron (NR_024012, intron 2 of 3) -8195 NM_001349117 2912 Hs.121510 NM_000839 ENSG00000164082 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate metabotropic receptor 2 protein-coding chr19-3474 chr19 35135490 35135700 + 6.95 0.000 promoter-TSS (NM_139284) promoter-TSS (NM_139284) -536 NM_139284 163175 Hs.65256 NM_139284 ENSG00000153902 LGI4 AMCNMY|LGIL3 leucine rich repeat LGI family member 4 protein-coding chr6-4603 chr6 44333352 44333562 + 6.95 0.000 Intergenic Intergenic -9203 NM_145026 221409 Hs.135283 NM_145026 ENSG00000249481 SPATS1 DDIP|SPATA8|SRSP1 spermatogenesis associated serine rich 1 protein-coding chr8-4963 chr8 123321785 123321995 + 6.95 0.000 intron (NM_014109, intron 27 of 27) AluJr4|SINE|Alu -26144 NR_037516 100500863 NR_037516 ENSG00000207704 MIR548AA1 - microRNA 548aa-1 ncRNA chr10-3838 chr10 1159419 1159629 + 6.95 0.000 promoter-TSS (NR_015376) promoter-TSS (NR_015376) -244 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr5-7813 chr5 66443960 66444170 + 6.95 0.000 Intergenic Intergenic 67539 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr7-8395 chr7 45385254 45385464 + 6.95 0.000 Intergenic Intergenic -188781 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr2-12611 chr2 71545861 71546071 + 6.95 0.000 intron (NM_001130985, intron 17 of 54) intron (NM_001130985, intron 17 of 54) 79267 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr5-6642 chr5 44606140 44606350 + 6.95 0.000 Intergenic LTR2|LTR|ERV1 -95963 NR_131946 102723839 Hs.561412 NR_131946 LINC02224 BRCAT107 long intergenic non-protein coding RNA 2224 ncRNA chr18-1489 chr18 65904516 65904726 + 6.95 0.000 Intergenic L1ME1|LINE|L1 153609 NM_001317214 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr12-7693 chr12 89882037 89882247 + 6.95 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -65551 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA chr4-2972 chr4 113716586 113716796 + 6.95 0.000 intron (NM_001321585, intron 2 of 19) intron (NM_001321585, intron 2 of 19) 45047 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr22-948 chr22 19524441 19524651 + 6.95 0.000 promoter-TSS (NM_001363066) promoter-TSS (NM_001363066) -136 NM_001363066 7122 Hs.505337 NM_003277 ENSG00000184113 CLDN5 AWAL|BEC1|CPETRL1|TMDVCF|TMVCF claudin 5 protein-coding chr5-7424 chr5 28850132 28850342 + 6.95 0.000 Intergenic ERVL-B4-int|LTR|ERVL -76633 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo chrX-4162 chrX 31558258 31558468 + 6.95 0.000 intron (NM_000109, intron 55 of 78) MER5A1|DNA|hAT-Charlie -50065 NM_004014 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr1-13789 chr1 18150752 18150962 + 6.95 0.000 intron (NM_032880, intron 1 of 9) intron (NM_032880, intron 1 of 9) 43059 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr9-6709 chr9 2286689 2286899 + 6.95 0.000 Intergenic LTR32|LTR|ERVL 128338 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr4-4576 chr4 75571089 75571299 + 6.95 0.000 Intergenic Intergenic 15128 NR_046429 152816 Hs.24510 NM_178497 ENSG00000174792 ODAPH AI2A4|C4orf26 odontogenesis associated phosphoprotein protein-coding chr3-8984 chr3 17141316 17141526 + 6.95 0.000 Intergenic Intergenic 208225 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr1-16594 chr1 236697541 236697751 + 6.95 0.000 intron (NM_001278344, intron 1 of 22) intron (NM_001278344, intron 1 of 22) 11147 NM_001278343 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr2-6273 chr2 47311562 47311772 + 6.95 0.000 intron (NR_110207, intron 1 of 2) THE1B|LTR|ERVL-MaLR -23648 NR_001568 618 NR_001568 ENSG00000236824 BCYRN1 BC200|BC200a|LINC00004|NCRNA00004 brain cytoplasmic RNA 1 ncRNA chr9-4542 chr9 79023047 79023257 + 6.95 0.000 Intergenic Intergenic 122514 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr1-13305 chr1 234682385 234682595 + 6.95 0.000 Intergenic Intergenic 36201 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr7-7839 chr7 4626161 4626371 + 6.95 0.000 Intergenic L2c|LINE|L2 -56029 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr3-5325 chr3 128671796 128672006 + 6.95 0.000 Intergenic AluSx|SINE|Alu -21083 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chr4-4197 chr4 12936604 12936814 + 6.95 0.000 Intergenic LTR33|LTR|ERVL 547631 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr3-8825 chr3 8233621 8233831 + 6.95 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) -217419 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr6-6450 chr6 101885322 101885532 + 6.95 0.000 intron (NM_001166247, intron 10 of 16) intron (NM_001166247, intron 10 of 16) 486442 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr9-5270 chr9 81082239 81082449 + 6.95 0.000 Intergenic Intergenic 607191 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr18-1605 chr18 44309289 44309499 + 6.95 0.000 Intergenic L1PA17|LINE|L1 222303 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr16-5616 chr16 57870025 57870235 + 6.95 0.000 Intergenic AluSz|SINE|Alu 59493 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding chr11-7102 chr11 123112189 123112399 + 6.95 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) -50158 NM_153201 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr15-5087 chr15 87619306 87619516 + 6.95 0.000 Intergenic Intergenic 42482 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr2-9910 chr2 232414985 232415195 + 6.95 0.000 Intergenic Intergenic 8246 NM_031313 251 Hs.333509 NM_031313 ENSG00000163286 ALPG ALPPL|ALPPL2|GCAP alkaline phosphatase, germ cell protein-coding chr14-2636 chr14 66547924 66548134 + 6.95 0.000 intron (NM_001024218, intron 1 of 21) Tigger1|DNA|TcMar-Tigger 40622 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr7-6385 chr7 151862911 151863121 + 6.95 0.000 intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -14026 NR_038926 100505483 Hs.649054 NR_038926 PRKAG2-AS1 - PRKAG2 antisense RNA 1 ncRNA chrX-3725 chrX 119025659 119025869 + 6.95 0.000 Intergenic AluSx|SINE|Alu 49432 NM_001289109 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr4-6356 chr4 102327297 102327507 + 6.95 0.000 intron (NM_022154, intron 1 of 7) intron (NM_022154, intron 1 of 7) -3090 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr6-8475 chr6 156370574 156370784 + 6.95 0.000 Intergenic Intergenic -8071 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr2-10153 chr2 78889378 78889588 + 6.95 0.000 Intergenic Intergenic -136219 NM_198448 130120 Hs.447084 NM_198448 ENSG00000143954 REG3G LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429 regenerating family member 3 gamma protein-coding chr7-1694 chr7 155408617 155408827 + 6.95 0.000 Intergenic Intergenic 26646 NR_147174 100286906 Hs.568111 NR_147174 LOC100286906 - uncharacterized LOC100286906 ncRNA chr11-8510 chr11 123510622 123510832 + 6.95 0.000 intron (NM_001330396, intron 2 of 19) intron (NM_001330396, intron 2 of 19) 811 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr12-3041 chr12 2846490 2846700 + 6.95 0.000 intron (NR_147202, intron 14 of 15) MIR3|SINE|MIR 10444 NM_001365174 101929469 Hs.634625 NM_001365174 ENSG00000283297 TEX52 - testis expressed 52 protein-coding chr20-3629 chr20 8148671 8148881 + 6.95 0.000 intron (NM_182734, intron 1 of 32) L1MB3|LINE|L1 16510 NM_182734 23236 Hs.431173 NM_015192 ENSG00000182621 PLCB1 EIEE12|PI-PLC|PLC-154|PLC-I|PLC-beta-1|PLC154|PLCB1A|PLCB1B phospholipase C beta 1 protein-coding chr4-7871 chr4 104284517 104284727 + 6.95 0.000 Intergenic L1MB7|LINE|L1 -206343 NR_125926 101929468 Hs.480435 NR_125926 ENSG00000245384 CXXC4-AS1 - CXXC4 antisense RNA 1 ncRNA chr5-2571 chr5 52800778 52800988 + 6.95 0.000 exon (NM_015946, exon 2 of 3) exon (NM_015946, exon 2 of 3) 12967 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr9-8879 chr9 136197317 136197527 + 6.95 0.000 exon (NM_014564, exon 6 of 6) exon (NM_014564, exon 6 of 6) 4252 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr13-1817 chr13 55453710 55453920 + 6.95 0.000 Intergenic MIR|SINE|MIR 279361 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr7-8569 chr7 64888372 64888582 + 6.95 0.000 Intergenic Intergenic -14765 NR_003099 10793 Hs.520889 NM_021148 ENSG00000198039 ZNF273 HZF9 zinc finger protein 273 protein-coding chr3-3439 chr3 129495403 129495613 + 6.95 0.000 exon (NM_018262, exon 17 of 29) exon (NM_018262, exon 17 of 29) -33131 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr11-6462 chr11 67093365 67093575 + 6.95 0.000 Intergenic Intergenic 24878 NR_160735 107984341 NR_160735 LOC107984341 - uncharacterized LOC107984341 ncRNA chr17-4254 chr17 50817251 50817461 + 6.95 0.000 Intergenic Intergenic -17228 NM_001330341 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr10-8155 chr10 70926974 70927184 + 6.95 0.000 Intergenic Intergenic -11974 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr14-2977 chr14 51168080 51168290 + 6.95 0.000 Intergenic Intergenic -72062 NM_030755 81542 Hs.125221 NM_030755 ENSG00000139921 TMX1 PDIA11|TMX|TXNDC|TXNDC1 thioredoxin related transmembrane protein 1 protein-coding chr3-3321 chr3 191738116 191738326 + 6.95 0.000 Intergenic LTR71A|LTR|ERV1 277058 NM_001083308 152138 Hs.690618 NM_001083308 ENSG00000253548 PYDC2 POP2|cPOP2 pyrin domain containing 2 protein-coding chr12-6838 chr12 14192799 14193009 + 6.95 0.000 Intergenic Intergenic -172728 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr11-8242 chr11 66740779 66740989 + 6.95 0.000 Intergenic Intergenic -3852 NM_024650 79703 Hs.292088 NM_024650 ENSG00000173715 C11orf80 HYDM4|TOP6BL|TOPOVIBL chromosome 11 open reading frame 80 protein-coding chr22-2776 chr22 41491370 41491580 + 6.95 0.000 intron (NM_001098, intron 1 of 17) L3|LINE|CR1 22358 NM_001098 50 Hs.643610 NM_001098 ENSG00000100412 ACO2 ACONM|HEL-S-284|ICRD|OCA8|OPA9 aconitase 2 protein-coding chr2-14158 chr2 203998268 203998478 + 6.95 0.000 Intergenic Intergenic 61625 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr1-10091 chr1 95498570 95498780 + 6.95 0.000 Intergenic Intergenic -11441 NR_110622 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA chr15-1773 chr15 71052321 71052531 + 6.95 0.000 Intergenic Intergenic -89023 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr17-8391 chr17 75185597 75185807 + 6.95 0.000 Intergenic AluSx1|SINE|Alu -2743 NM_006937 6613 Hs.380973 NM_006937 ENSG00000188612 SUMO2 HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A small ubiquitin like modifier 2 protein-coding chr8-4578 chr8 128424485 128424695 + 6.95 0.000 intron (NR_121672, intron 3 of 7) intron (NR_121672, intron 3 of 7) 140089 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr15-2807 chr15 37996084 37996294 + 6.95 0.000 Intergenic Intergenic -44204 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LINC02345 - long intergenic non-protein coding RNA 2345 ncRNA chr1-13041 chr1 169408915 169409125 + 6.95 0.000 intron (NM_001300969, intron 4 of 5) L1PA7|LINE|L1 18454 NM_021179 57821 Hs.567557 NM_021179 ENSG00000117477 CCDC181 C1orf114 coiled-coil domain containing 181 protein-coding chr12-4460 chr12 14775693 14775903 + 6.95 0.000 non-coding (NR_027716, exon 2 of 2) non-coding (NR_027716, exon 2 of 2) 1462 NM_177925 55766 Hs.524280 NM_018267 ENSG00000246705 H2AFJ H2AJ H2A histone family member J protein-coding chr2-10074 chr2 44060341 44060551 + 6.95 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -64457 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr3-8708 chr3 188284573 188284783 + 6.95 0.000 intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 59273 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr6-5627 chr6 54959577 54959787 + 6.95 0.000 Intergenic Intergenic 112911 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr19-3822 chr19 10424541 10424751 + 6.95 0.000 intron (NM_001111307, intron 1 of 14) CpG 4108 NM_001111307 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr14-3982 chr14 33426202 33426412 + 6.95 0.000 intron (NM_001165893, intron 3 of 10) intron (NM_001165893, intron 3 of 10) -282630 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr3-8971 chr3 15630180 15630390 + 6.95 0.000 intron (NM_001281724, intron 2 of 5) intron (NM_001281724, intron 2 of 5) 28316 NM_001281725 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr7-6516 chr7 29458057 29458267 + 6.95 0.000 intron (NM_001293072, intron 6 of 12) intron (NM_001293072, intron 6 of 12) -21550 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr6-6882 chr6 11586564 11586774 + 6.95 0.000 Intergenic Intergenic 48920 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr17-5967 chr17 76904051 76904261 + 6.95 0.000 intron (NM_144677, intron 5 of 16) intron (NM_144677, intron 5 of 16) 31509 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B protein-coding chr8-6404 chr8 56220432 56220642 + 6.95 0.000 Intergenic L1MB8|LINE|L1 8748 NM_001011671 79145 Hs.436913 NM_024300 ENSG00000170791 CHCHD7 COX23 coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding chr4-5482 chr4 71976120 71976330 + 6.95 0.000 Intergenic L2a|LINE|L2 -55579 NM_004885 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr10-9017 chr10 122216715 122216925 + 6.95 0.000 exon (NM_006997, exon 5 of 17) exon (NM_006997, exon 5 of 17) 53190 NM_006997 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr5-6637 chr5 43673105 43673315 + 6.95 0.000 intron (NM_012343, intron 17 of 21) L1PA5|LINE|L1 -69980 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr11-7286 chr11 38149780 38149990 + 6.95 0.000 Intergenic L1MC3|LINE|L1 211284 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr3-6750 chr3 140505351 140505561 + 6.95 0.000 TTS (NR_108084) TTS (NR_108084) 3333 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr3-7806 chr3 96253009 96253219 + 6.95 0.000 Intergenic AluJr|SINE|Alu -106850 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chr4-4638 chr4 81017715 81017925 + 6.95 0.000 Intergenic THE1B|LTR|ERVL-MaLR -12888 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr7-4908 chr7 129156379 129156589 + 6.95 0.000 intron (NM_178562, intron 1 of 7) L1MC3|LINE|L1 11777 NM_178562 340348 Hs.27267 NM_178562 ENSG00000158457 TSPAN33 PEN|PEN.|TSPAN-33 tetraspanin 33 protein-coding chr8-3865 chr8 37044584 37044794 + 6.95 0.000 Intergenic Intergenic 260315 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr3-3351 chr3 21142131 21142341 + 6.95 0.000 Intergenic AluJr|SINE|Alu -263490 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr13-3269 chr13 39786057 39786267 + 6.95 0.000 intron (NM_001145079, intron 18 of 18) intron (NM_001145079, intron 18 of 18) -122027 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr12-6396 chr12 71995384 71995594 + 6.95 0.000 intron (NM_173353, intron 8 of 10) Charlie8|DNA|hAT-Charlie 56644 NM_173353 121278 Hs.736576 NM_173353 ENSG00000139287 TPH2 ADHD7|NTPH tryptophan hydroxylase 2 protein-coding chr16-5163 chr16 2898221 2898431 + 6.95 0.000 intron (NM_001142499, intron 3 of 3) intron (NM_001142499, intron 3 of 3) -13653 NM_032296 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr3-3749 chr3 4994968 4995178 + 6.95 0.000 Intergenic Intergenic -15112 NR_125916 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr1-6255 chr1 232393611 232393821 + 6.95 0.000 Intergenic Intergenic 121892 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr1-13720 chr1 15291951 15292161 + 6.95 0.000 intron (NM_052929, intron 4 of 30) MLT1B|LTR|ERVL-MaLR 44831 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr12-7450 chr12 62905703 62905913 + 6.95 0.000 intron (NM_020700, intron 1 of 9) intron (NM_020700, intron 1 of 9) 29342 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr21-1670 chr21 26796229 26796439 + 6.95 0.000 Intergenic Intergenic 49075 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding chr15-4490 chr15 51030315 51030525 + 6.95 0.000 Intergenic L1M1|LINE|L1 -7068 NR_146310 109729174 NR_146310 ENSG00000259240 MIR4713HG - MIR4713 host gene ncRNA chr6-8579 chr6 165195217 165195427 + 6.95 0.000 Intergenic HERVL-int|LTR|ERVL 114283 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr9-6796 chr9 34366888 34367098 + 6.95 0.000 3' UTR (NM_020702, exon 2 of 2) 3' UTR (NM_020702, exon 2 of 2) 9905 NM_020702 57462 Hs.522083 NM_020702 ENSG00000164976 MYORG IBGC7|KIAA1161|NET37 myogenesis regulating glycosidase (putative) protein-coding chr6-4627 chr6 46773274 46773484 + 6.95 0.000 Intergenic Intergenic -20010 NM_005588 4224 Hs.179704 NM_005588 ENSG00000112818 MEP1A PPHA meprin A subunit alpha protein-coding chr13-1145 chr13 31310875 31311085 + 6.95 0.000 intron (NM_194318, intron 12 of 14) LTR27E|LTR|ERV1 111005 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chrX-3256 chrX 80809006 80809216 + 6.95 0.000 intron (NM_153252, intron 2 of 40) intron (NM_153252, intron 2 of 40) 766 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding chr3-4600 chr3 194812523 194812733 + 6.95 0.000 Intergenic Intergenic -43919 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr2-14277 chr2 215635697 215635907 + 6.95 0.000 intron (NR_037195, intron 5 of 9) L1PA15|LINE|L1 -82241 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr14-3125 chr14 67516332 67516542 + 6.95 0.000 promoter-TSS (NM_001348549) promoter-TSS (NM_001348549) -952 NM_001348548 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr10-4965 chr10 29257084 29257294 + 6.95 0.000 Intergenic Intergenic -31881 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr6-7769 chr6 95572117 95572327 + 6.95 0.000 intron (NR_104136, intron 1 of 2) intron (NR_104136, intron 1 of 2) 5229 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr7-6193 chr7 129822248 129822458 + 6.95 0.000 Intergenic Intergenic -47339 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr5-6126 chr5 32074545 32074755 + 6.95 0.000 intron (NM_178140, intron 18 of 24) intron (NM_178140, intron 18 of 24) 99669 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr10-6164 chr10 3283675 3283885 + 6.95 0.000 Intergenic Intergenic -34915 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr1-9082 chr1 16007227 16007437 + 6.95 0.000 3' UTR (NM_178840, exon 2 of 2) 3' UTR (NM_178840, exon 2 of 2) 3096 NM_178840 149563 Hs.29190 NM_178840 ENSG00000183888 SRARP C1orf64|ERRF steroid receptor associated and regulated protein protein-coding chr3-10849 chr3 166805264 166805474 + 6.95 0.000 Intergenic L1P4e|LINE|L1 -93314 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr1-8543 chr1 160194005 160194215 + 6.95 0.000 intron (NM_001231, intron 3 of 10) (CA)n|Simple_repeat|Simple_repeat 3535 NM_001231 844 Hs.632476 NM_001231 ENSG00000143318 CASQ1 CASQ|PDIB1|VMCQA calsequestrin 1 protein-coding chr15-4645 chr15 63842782 63842992 + 6.95 0.000 Intergenic AluJr|SINE|Alu -8939 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding chr2-3288 chr2 67840500 67840710 + 6.95 0.000 Intergenic Intergenic -15043 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr5-5933 chr5 73822261 73822471 + 6.95 0.000 intron (NM_001244364, intron 1 of 27) intron (NM_001244364, intron 1 of 27) 8820 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr5-4540 chr5 16897314 16897524 + 6.95 0.000 intron (NM_012334, intron 1 of 40) intron (NM_012334, intron 1 of 40) 38869 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr4-6872 chr4 11107895 11108105 + 6.95 0.000 Intergenic LTR1F1|LTR|ERV1 -260827 NR_030298 693157 NR_030298 ENSG00000207716 MIR572 MIRN572|hsa-mir-572 microRNA 572 ncRNA chr9-3528 chr9 35492001 35492211 + 6.95 0.000 intron (NM_001330740, intron 1 of 10) intron (NM_001330740, intron 1 of 10) 1995 NM_014806 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr11-5999 chr11 21204984 21205194 + 6.95 0.000 intron (NM_201551, intron 13 of 18) L1PA7|LINE|L1 535503 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr8-5625 chr8 100651567 100651777 + 6.95 0.000 Intergenic Intergenic -2007 NM_152628 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr3-6643 chr3 127744453 127744663 + 6.95 0.000 intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 71606 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr5-8327 chr5 117817682 117817892 + 6.95 0.000 intron (NR_104997, intron 1 of 2) L1PA11|LINE|L1 87426 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr3-11010 chr3 180457209 180457419 + 6.95 0.000 Intergenic Intergenic 43141 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr11-4198 chr11 62005383 62005593 + 6.95 0.000 Intergenic Intergenic -37854 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr6-3119 chr6 102384395 102384605 + 6.95 0.000 Intergenic L1M4b|LINE|L1 985515 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr11-7674 chr11 66165176 66165386 + 6.95 0.000 intron (NM_018026, intron 1 of 23) L2|LINE|L2 -92013 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr8-4277 chr8 95069021 95069231 + 6.95 0.000 non-coding (NR_132987, exon 2 of 2) non-coding (NR_132987, exon 2 of 2) -3788 NR_036105 100422964 NR_036105 ENSG00000283522 MIR3150A MIR3150|mir-3150a microRNA 3150a ncRNA chr16-4538 chr16 64515778 64515988 + 6.95 0.000 Intergenic Intergenic 606180 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chrX-5024 chrX 119541525 119541735 + 6.95 0.000 intron (NM_022101, intron 5 of 6) AluSx4|SINE|Alu 23779 NM_001170569 63932 Hs.248572 NM_022101 ENSG00000018610 CXorf56 MRX107 chromosome X open reading frame 56 protein-coding chr19-4736 chr19 22644799 22645009 + 6.95 0.000 intron (NM_020855, intron 1 of 3) L1PA8A|LINE|L1 10580 NM_020855 57615 Hs.232108 NM_020855 ENSG00000229676 ZNF492 ZNF115 zinc finger protein 492 protein-coding chr2-10784 chr2 43844311 43844521 + 6.95 0.000 intron (NM_001357321, intron 1 of 12) intron (NM_001357321, intron 1 of 12) 5445 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr8-5226 chr8 120632614 120632824 + 6.95 0.000 intron (NM_021021, intron 2 of 6) intron (NM_021021, intron 2 of 6) -128534 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr19-3720 chr19 42146281 42146491 + 6.95 0.000 Intergenic Intergenic -12873 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr10-2774 chr10 125136047 125136257 + 6.95 0.000 intron (NM_001290214, intron 1 of 10) MER5B|DNA|hAT-Charlie 22625 NM_001321013 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr13-4012 chr13 71335783 71335993 + 6.95 0.000 Intergenic MER20|DNA|hAT-Charlie 320747 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chrX-4778 chrX 97132735 97132945 + 6.95 0.000 intron (NM_007309, intron 21 of 26) intron (NM_007309, intron 21 of 26) 248932 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr5-4807 chr5 58407488 58407698 + 6.95 0.000 Intergenic MIR3|SINE|MIR 52493 NM_006622 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding chr15-2482 chr15 92809288 92809498 + 6.95 0.000 Intergenic CpG 13909 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr2-11519 chr2 238626574 238626784 + 6.95 0.000 Intergenic AluSz|SINE|Alu -71180 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr1-9493 chr1 37181767 37181977 + 6.95 0.000 Intergenic L1MEf|LINE|L1 20309 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr5-8363 chr5 121729345 121729555 + 6.95 0.000 Intergenic Intergenic -122432 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr2-12320 chr2 47600590 47600800 + 6.95 0.000 Intergenic Intergenic -30364 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr20-2934 chr20 2809112 2809322 + 6.95 0.000 Intergenic LTR14C|LTR|ERVK -5770 NM_001256538 128653 Hs.352187 NM_080739 ENSG00000258713 C20orf141 dJ860F19.4 chromosome 20 open reading frame 141 protein-coding chr16-5475 chr16 3626184 3626394 + 6.95 0.000 Intergenic L1M5|LINE|L1 -14683 NM_032444 84464 Hs.143681 NM_032444 ENSG00000188827 SLX4 BTBD12|FANCP|MUS312 SLX4 structure-specific endonuclease subunit protein-coding chr7-3363 chr7 100016530 100016740 + 6.95 0.000 intron (NM_001287055, intron 1 of 3) intron (NM_001287055, intron 1 of 3) 1039 NR_144477 7586 Hs.615360 NM_003439 ENSG00000106261 ZKSCAN1 KOX18|PHZ-37|ZNF139|ZNF36|ZSCAN33 zinc finger with KRAB and SCAN domains 1 protein-coding chr10-4038 chr10 19575952 19576162 + 6.95 0.000 intron (NM_001142308, intron 33 of 39) MLT1N2|LTR|ERVL-MaLR 152493 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr17-3490 chr17 48095722 48095932 + 6.95 0.000 intron (NM_001127228, intron 1 of 4) intron (NM_001127228, intron 1 of 4) 5359 NM_006807 10951 Hs.77254 NM_006807 ENSG00000108468 CBX1 CBX|HP1-BETA|HP1Hs-beta|HP1Hsbeta|M31|MOD1|p25beta chromobox 1 protein-coding chr3-9330 chr3 45652894 45653104 + 6.95 0.000 intron (NM_014240, intron 2 of 7) intron (NM_014240, intron 2 of 7) 35883 NR_033947 644714 Hs.712889 NR_033947 LIMD1-AS1 - LIMD1 antisense RNA 1 ncRNA chr9-7710 chr9 72857788 72857998 + 6.95 0.000 Intergenic Intergenic 16216 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr5-2029 chr5 65507207 65507417 + 6.95 0.000 Intergenic Intergenic -25392 NM_197941 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr18-2999 chr18 24644852 24645062 + 6.95 0.000 intron (NR_040033, intron 1 of 2) intron (NR_040033, intron 1 of 2) 16775 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr1-11566 chr1 200314417 200314627 + 6.95 0.000 Intergenic Intergenic 59270 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr13-3669 chr13 33721859 33722069 + 6.95 0.000 Intergenic Intergenic -45170 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr4-6345 chr4 95842317 95842527 + 6.95 0.000 TTS (NM_005390) TTS (NM_005390) 2329 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding chr18-1829 chr18 22009169 22009379 + 6.95 0.000 Intergenic Intergenic 159694 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA chr6-3276 chr6 154575775 154575985 + 6.95 0.000 Intergenic L2a|LINE|L2 -65195 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr9-8142 chr9 102114325 102114535 + 6.95 0.000 Intergenic AluJb|SINE|Alu -375850 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr5-5598 chr5 151098910 151099120 + 6.95 0.000 Intergenic Intergenic -11330 NM_001252390 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr17-3760 chr17 31404859 31405069 + 6.95 0.000 intron (NM_032932, intron 1 of 14) intron (NM_032932, intron 1 of 14) 13289 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr1-10035 chr1 88899366 88899576 + 6.95 0.000 Intergenic HERVL-int|LTR|ERVL -7904 NM_001514 2959 Hs.481852 NM_001514 ENSG00000137947 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding chr1-8695 chr1 224674123 224674333 + 6.95 0.000 intron (NM_152495, intron 1 of 5) intron (NM_152495, intron 1 of 5) 57911 NM_152495 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr5-6836 chr5 112735933 112736143 + 6.95 0.000 intron (NM_001354902, intron 1 of 14) intron (NM_001354902, intron 1 of 14) -1847 NM_001354904 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding chr14-4592 chr14 50928290 50928500 + 6.95 0.000 intron (NM_002863, intron 4 of 19) intron (NM_002863, intron 4 of 19) 16088 NM_002863 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr19-5002 chr19 47125521 47125731 + 6.95 0.000 Intergenic Intergenic -5209 NM_001145714 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr12-6518 chr12 108916306 108916516 + 6.95 0.000 intron (NM_018711, intron 14 of 15) intron (NM_018711, intron 14 of 15) 36319 NM_001917 1610 Hs.113227 NM_001917 ENSG00000110887 DAO DAAO|DAMOX|OXDA D-amino acid oxidase protein-coding chrX-4836 chrX 103277894 103278104 + 6.95 0.000 Intergenic Intergenic -1249 NM_001012979 340543 Hs.403462 NM_001012979 ENSG00000204065 TCEAL5 WEX4 transcription elongation factor A like 5 protein-coding chr1-9760 chr1 54754620 54754830 + 6.95 0.000 Intergenic Intergenic 9798 NM_152268 25973 Hs.380169 NM_152268 ENSG00000162396 PARS2 EIEE75|MT-PRORS|proRS prolyl-tRNA synthetase 2, mitochondrial protein-coding chr21-1775 chr21 37172732 37172942 + 6.95 0.000 intron (NM_003316, intron 35 of 45) intron (NM_003316, intron 35 of 45) 21089 NR_046651 100874006 Hs.570411 NR_046651 ENSG00000228677 TTC3-AS1 - TTC3 antisense RNA 1 ncRNA chrX-3193 chrX 44055882 44056092 + 6.95 0.000 Intergenic L2b|LINE|L2 -82597 NM_000266 4693 Hs.522615 NM_000266 ENSG00000124479 NDP EVR2|FEVR|ND norrin cystine knot growth factor NDP protein-coding chr12-6845 chr12 15011179 15011389 + 6.95 0.000 Intergenic Intergenic 9451 NR_120466 101928340 Hs.401232 NR_120466 ENSG00000255727 LINC01489 - long intergenic non-protein coding RNA 1489 ncRNA chr9-6017 chr9 135487646 135487856 + 6.95 0.000 exon (NM_014811, exon 4 of 4) exon (NM_014811, exon 4 of 4) 7969 NM_014811 9858 Hs.533260 NM_014811 ENSG00000196422 PPP1R26 KIAA0649|NRBE3 protein phosphatase 1 regulatory subunit 26 protein-coding chr10-8316 chr10 78542016 78542226 + 6.95 0.000 Intergenic Intergenic 274779 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr18-1845 chr18 23291922 23292132 + 6.95 0.000 Intergenic Intergenic 136202 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr10-4867 chr10 16079966 16080176 + 6.95 0.000 Intergenic AluSx4|SINE|Alu -219538 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chr1-15757 chr1 173061191 173061401 + 6.95 0.000 Intergenic Intergenic -10333 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr2-10663 chr2 20234140 20234350 + 6.95 0.000 Intergenic AluSq|SINE|Alu -8812 NM_001006946 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr11-4509 chr11 116828673 116828883 + 6.95 0.000 Intergenic MIRb|SINE|MIR -1129 NM_000040 345 Hs.73849 NM_000040 ENSG00000110245 APOC3 APOCIII apolipoprotein C3 protein-coding chr4-8515 chr4 162346991 162347201 + 6.95 0.000 Intergenic Intergenic -183062 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr1-14828 chr1 75477156 75477366 + 6.95 0.000 intron (NM_001320285, intron 2 of 25) L1PA3|LINE|L1 133853 NM_001320287 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr5-8147 chr5 100914468 100914678 + 6.95 0.000 Intergenic Intergenic -11291 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr20-3902 chr20 31991340 31991550 + 6.95 0.000 intron (NM_001011718, intron 1 of 2) intron (NM_001011718, intron 1 of 2) -18993 NM_080625 140706 Hs.382151 NM_080625 ENSG00000101331 CCM2L C20orf160|dJ310O13.5 CCM2 like scaffold protein protein-coding chr6-5594 chr6 36999293 36999503 + 6.95 0.000 Intergenic Intergenic -6257 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr19-5838 chr19 41995807 41996017 + 6.95 0.000 Intergenic Intergenic -1682 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr4-8634 chr4 174398989 174399199 + 6.95 0.000 Intergenic MER4A1|LTR|ERV1 -24701 NR_036236 100423042 NR_036236 ENSG00000265846 MIR4276 - microRNA 4276 ncRNA chr6-5361 chr6 149967164 149967374 + 6.95 0.000 intron (NR_133659, intron 1 of 4) ERV3-16A3_I-int|LTR|ERVL 3326 NM_025218 80329 Hs.653255 NM_025218 ENSG00000111981 ULBP1 N2DL-1|NKG2DL1|RAET1I UL16 binding protein 1 protein-coding chr12-8113 chr12 119851773 119851983 + 6.95 0.000 intron (NM_007174, intron 4 of 46) AluJo|SINE|Alu 25442 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr5-3187 chr5 76493108 76493318 + 6.95 0.000 intron (NM_006633, intron 2 of 35) L2a|LINE|L2 -54196 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr9-6490 chr9 96436206 96436416 + 6.95 0.000 Intergenic MER77|LTR|ERVL -13858 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr7-7711 chr7 353793 354003 + 6.95 0.000 Intergenic CpG -25527 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr7-5053 chr7 1716697 1716907 + 6.95 0.000 intron (NM_001128636, intron 2 of 2) intron (NM_001128636, intron 2 of 2) 25508 NR_120509 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr7-6939 chr7 88836450 88836660 + 6.95 0.000 intron (NM_181646, intron 1 of 3) intron (NM_181646, intron 1 of 3) -40818 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr4-7516 chr4 74990295 74990505 + 6.95 0.000 intron (NM_015393, intron 1 of 3) intron (NM_015393, intron 1 of 3) -20038 NR_121617 100507388 Hs.570765 NR_121617 ENSG00000249717 LOC100507388 - uncharacterized LOC100507388 ncRNA chr9-6201 chr9 96556960 96557170 + 6.95 0.000 intron (NR_147239, intron 4 of 14) intron (NR_147239, intron 4 of 14) 9766 NM_001351568 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr3-7101 chr3 181638014 181638224 + 6.95 0.000 intron (NR_075090, intron 2 of 2) MLT1C|LTR|ERVL-MaLR 27785 NR_075090 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr6-7142 chr6 36132894 36133104 + 6.95 0.000 intron (NR_072996, intron 3 of 9) intron (NR_072996, intron 3 of 9) 2486 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr3-4751 chr3 95744009 95744219 + 6.95 0.000 Intergenic Intergenic -60921 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr2-11241 chr2 168570972 168571182 + 6.95 0.000 intron (NM_001256126, intron 3 of 10) intron (NM_001256126, intron 3 of 10) -11866 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr16-6044 chr16 10569618 10569828 + 6.95 0.000 intron (NM_001424, intron 1 of 4) intron (NM_001424, intron 1 of 4) 10875 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr19-6528 chr19 18750297 18750507 + 6.95 0.000 intron (NM_015321, intron 5 of 13) intron (NM_015321, intron 5 of 13) 40903 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr17-3367 chr17 80180881 80181091 + 6.95 0.000 intron (NM_001366385, intron 4 of 23) AluJb|SINE|Alu 2478 NM_001257970 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chrX-2209 chrX 41491818 41492028 + 6.95 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 44463 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr4-7576 chr4 79261514 79261724 + 6.95 0.000 intron (NR_038342, intron 4 of 5) intron (NR_038342, intron 4 of 5) 64442 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr11-7583 chr11 34405052 34405262 + 6.95 0.000 Intergenic Intergenic -33777 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding chr10-8426 chr10 85422790 85423000 + 6.95 0.000 Intergenic AluSc|SINE|Alu 9877 NR_120669 101929646 Hs.116129 NR_120669 LINC02647 - long intergenic non-protein coding RNA 2647 ncRNA chr11-2885 chr11 44727826 44728036 + 6.95 0.000 intron (NM_130783, intron 1 of 9) CpG 969 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr11-6221 chr11 46735083 46735293 + 6.95 0.000 intron (NM_000506, intron 12 of 13) AluSc|SINE|Alu 15975 NM_001311257 2147 Hs.655207 NM_000506 ENSG00000180210 F2 PT|RPRGL2|THPH1 coagulation factor II, thrombin protein-coding chr5-6747 chr5 79255649 79255859 + 6.95 0.000 intron (NM_152405, intron 1 of 10) L1M1|LINE|L1 19623 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr6-6325 chr6 47446752 47446962 + 6.95 0.000 Intergenic L2c|LINE|L2 -30932 NM_012120 23607 Hs.485518 NM_012120 ENSG00000198087 CD2AP CMS CD2 associated protein protein-coding chr7-4794 chr7 85828540 85828750 + 6.95 0.000 Intergenic Intergenic 407523 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr10-8874 chr10 112716899 112717109 + 6.95 0.000 intron (NM_001365713, intron 8 of 8) MamRep1879|DNA|hAT-Tip100? 82834 NR_036177 100422909 NR_036177 ENSG00000264763 MIR4295 - microRNA 4295 ncRNA chr5-4926 chr5 73963125 73963335 + 6.95 0.000 Intergenic Intergenic 149684 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr6-5621 chr6 48836814 48837024 + 6.95 0.000 Intergenic Intergenic 626334 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr2-12878 chr2 98118242 98118452 + 6.95 0.000 intron (NR_144296, intron 3 of 28) intron (NR_144296, intron 3 of 28) 31180 NR_144296 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr12-4864 chr12 60881894 60882104 + 6.95 0.000 Intergenic L1MA1|LINE|L1 1192629 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chrX-3132 chrX 13466275 13466485 + 6.95 0.000 Intergenic Intergenic -103221 NM_015507 25975 Hs.12844 NM_015507 ENSG00000198759 EGFL6 MAEG|W80 EGF like domain multiple 6 protein-coding chr5-9119 chr5 174086819 174087029 + 6.95 0.000 intron (NM_015980, intron 3 of 4) intron (NM_015980, intron 3 of 4) 41218 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr9-4897 chr9 6534662 6534872 + 6.95 0.000 exon (NM_000170, exon 24 of 25) exon (NM_000170, exon 24 of 25) 110925 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr14-2849 chr14 29553841 29554051 + 6.95 0.000 Intergenic AluSp|SINE|Alu 373150 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr3-6406 chr3 99430410 99430620 + 6.95 0.000 Intergenic Intergenic -208079 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr1-9327 chr1 27786377 27786587 + 6.95 0.000 intron (NM_177424, intron 1 of 8) intron (NM_177424, intron 1 of 8) 13263 NM_177424 23673 Hs.523855 NM_177424 ENSG00000117758 STX12 STX13|STX14 syntaxin 12 protein-coding chr7-8425 chr7 46695550 46695760 + 6.95 0.000 intron (NR_134575, intron 1 of 2) L1MC2|LINE|L1 1467 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr5-6379 chr5 139822460 139822670 + 6.95 0.000 intron (NM_032289, intron 6 of 14) intron (NM_032289, intron 6 of 14) 26757 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr14-4028 chr14 50741507 50741717 + 6.95 0.000 exon (NM_020921, exon 25 of 31) exon (NM_020921, exon 25 of 31) -73306 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding chr5-6243 chr5 89494783 89494993 + 6.95 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 521832 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr8-2617 chr8 61361630 61361840 + 6.95 0.000 intron (NM_173519, intron 2 of 5) intron (NM_173519, intron 2 of 5) 73765 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr4-6532 chr4 170066374 170066584 + 6.95 0.000 intron (NM_182662, intron 10 of 13) intron (NM_182662, intron 10 of 13) 23477 NM_016228 51166 Hs.529735 NM_016228 ENSG00000109576 AADAT KAT2|KATII|KYAT2 aminoadipate aminotransferase protein-coding chrX-3784 chrX 134099230 134099440 + 6.95 0.000 Intergenic MLT2B1|LTR|ERVL 70117 NR_029852 574031 NR_029852 ENSG00000284499 MIR363 MIR-363|MIRN363|hsa-mir-363 microRNA 363 ncRNA chr2-12993 chr2 106064637 106064847 + 6.95 0.000 promoter-TSS (NM_032411) promoter-TSS (NM_032411) -946 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding chr6-7852 chr6 105276616 105276826 + 6.95 0.000 3' UTR (NM_002726, exon 15 of 15) 3' UTR (NM_002726, exon 15 of 15) -96707 NM_022361 64208 Hs.458336 NM_022361 ENSG00000132429 POPDC3 POP3|bA355M14.1 popeye domain containing 3 protein-coding chr15-3462 chr15 93055428 93055638 + 6.95 0.000 intron (NM_001166286, intron 1 of 2) intron (NM_001166286, intron 1 of 2) 17623 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr12-8108 chr12 119408463 119408673 + 6.95 0.000 intron (NM_178499, intron 1 of 13) AluY|SINE|Alu 73839 NM_178499 160777 Hs.98188 NM_178499 ENSG00000183273 CCDC60 - coiled-coil domain containing 60 protein-coding chr6-3434 chr6 131679317 131679527 + 6.95 0.000 intron (NR_133007, intron 11 of 23) intron (NR_133007, intron 11 of 23) 21979 NM_030908 79541 Hs.486488 NM_030908 ENSG00000180658 OR2A4 OR2A10 olfactory receptor family 2 subfamily A member 4 protein-coding chr10-4500 chr10 86181342 86181552 + 6.95 0.000 intron (NM_017551, intron 3 of 15) intron (NM_017551, intron 3 of 15) 83341 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr10-6819 chr10 16770642 16770852 + 6.95 0.000 intron (NM_152724, intron 2 of 7) intron (NM_152724, intron 2 of 7) 46677 NM_012425 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr5-8172 chr5 104249989 104250199 + 6.95 0.000 Intergenic Intergenic -687305 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr7-4285 chr7 17041335 17041545 + 6.95 0.000 Intergenic Intergenic -159457 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chrX-3630 chrX 91110314 91110524 + 6.95 0.000 Intergenic L1PB1|LINE|L1 -324420 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chrX-1197 chrX 69222708 69222918 + 6.95 0.000 Intergenic Intergenic 43256 NR_103715 100996279 NR_103715 ENSG00000215162 LINC00269 CXorf62|NCRNA00269 long intergenic non-protein coding RNA 269 ncRNA chr5-6415 chr5 151202793 151203003 + 6.95 0.000 intron (NM_015621, intron 2 of 8) MIR|SINE|MIR -9236 NR_160730 105378230 NR_160730 LOC105378230 - uncharacterized LOC105378230 ncRNA chr6-7361 chr6 48112396 48112606 + 6.95 0.000 Intergenic L3|LINE|CR1 -43812 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr10-4189 chr10 101090877 101091087 + 6.95 0.000 intron (NR_130723, intron 2 of 2) intron (NR_130723, intron 2 of 2) 24683 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr11-7822 chr11 109252253 109252463 + 6.95 0.000 Intergenic L1MA6|LINE|L1 -169832 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr2-12648 chr2 73982806 73983016 + 6.95 0.000 Intergenic MIR|SINE|MIR -1472 NR_104030 100874048 Hs.600674 NR_104029 ENSG00000237883 DGUOK-AS1 - DGUOK antisense RNA 1 ncRNA chrX-4687 chrX 85362409 85362619 + 6.95 0.000 intron (NM_001307940, intron 3 of 15) L1PREC2|LINE|L1 17151 NM_024921 79983 Hs.267038 NM_024921 ENSG00000124429 POF1B POF|POF2B POF1B actin binding protein protein-coding chr1-11832 chr1 32490066 32490276 + 6.95 0.000 3' UTR (NM_001145720, exon 4 of 4) 3' UTR (NM_001145720, exon 4 of 4) 25099 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr9-3998 chr9 21995789 21995999 + 6.95 0.000 promoter-TSS (NM_001363763) promoter-TSS (NM_001363763) -570 NM_001363763 1029 Hs.512599 NM_000077 ENSG00000147889 CDKN2A ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16 cyclin dependent kinase inhibitor 2A protein-coding chr3-10015 chr3 101518080 101518290 + 6.95 0.000 promoter-TSS (NR_036433) promoter-TSS (NR_036433) -682 NR_036433 131909 Hs.518125 NR_036433 FAM172BP FAM172B family with sequence similarity 172 member B, pseudogene pseudo chr13-1501 chr13 113590825 113591035 + 6.95 0.000 intron (NM_007111, intron 2 of 11) AluY|SINE|Alu 6177 NM_007111 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr2-6878 chr2 83172967 83173177 + 6.95 0.000 Intergenic Intergenic 316269 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr2-2931 chr2 4974052 4974262 + 6.95 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -317935 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr1-13515 chr1 5856297 5856507 + 6.95 0.000 Intergenic Intergenic 6339 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr19-3604 chr19 50556781 50556991 + 6.95 0.000 intron (NM_001080457, intron 1 of 2) intron (NM_001080457, intron 1 of 2) -5844 NM_001348568 94030 Hs.120873 NM_001080457 ENSG00000131409 LRRC4B HSM|LRIG4|NGL-3 leucine rich repeat containing 4B protein-coding chr13-4434 chr13 111329943 111330153 + 6.95 0.000 intron (NM_152324, intron 3 of 5) LTR38B|LTR|ERV1 9406 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr7-7620 chr7 133203105 133203315 + 6.95 0.000 Intergenic Intergenic -49857 NM_001037126 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr2-14527 chr2 229133142 229133352 + 6.95 0.000 intron (NM_001330157, intron 1 of 1) intron (NM_001330157, intron 1 of 1) 98845 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr2-8623 chr2 143949741 143949951 + 6.95 0.000 intron (NM_001284238, intron 13 of 13) intron (NM_001284238, intron 13 of 13) 12779 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chrX-3254 chrX 80611709 80611919 + 6.95 0.000 Intergenic L1PA15|LINE|L1 191367 NM_152630 169966 Hs.367959 NM_152630 ENSG00000174016 TENT5D CT1.26|CT112|FAM46D terminal nucleotidyltransferase 5D protein-coding chr11-7867 chr11 119855992 119856202 + 6.95 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 126514 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr1-10960 chr1 213040792 213041002 + 6.95 0.000 Intergenic MER54A|LTR|ERVL -10336 NM_001349659 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr20-3343 chr20 25861364 25861574 + 6.95 0.000 Intergenic SST1|Satellite|centr -7448 NR_110001 101926935 Hs.737440 NR_110001 LOC101926935 - uncharacterized LOC101926935 ncRNA chr4-5865 chr4 121900254 121900464 + 6.95 0.000 intron (NM_001130698, intron 9 of 11) intron (NM_001130698, intron 9 of 11) -29862 NM_018190 55212 Hs.591694 NM_018190 ENSG00000138686 BBS7 BBS2L1 Bardet-Biedl syndrome 7 protein-coding chr12-3961 chr12 10044198 10044408 + 6.95 0.000 intron (NM_207345, intron 2 of 8) intron (NM_207345, intron 2 of 8) 13621 NM_207345 283420 Hs.531189 NM_207345 ENSG00000197992 CLEC9A CD370|DNGR-1|DNGR1|UNQ9341 C-type lectin domain containing 9A protein-coding chr18-3237 chr18 48123788 48123998 + 6.95 0.000 intron (NM_001371291, intron 4 of 6) intron (NM_001371291, intron 4 of 6) 13255 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr20-3480 chr20 58375515 58375725 + 6.95 0.000 Intergenic Intergenic -13499 NM_004738 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr2-6202 chr2 19999867 20000077 + 6.95 0.000 intron (NR_110235, intron 2 of 2) intron (NR_110235, intron 2 of 2) 9768 NR_110235 101928222 Hs.6985 NR_110235 LOC101928222 - uncharacterized LOC101928222 ncRNA chr2-14654 chr2 235843436 235843646 + 6.95 0.000 intron (NM_001037131, intron 9 of 17) intron (NM_001037131, intron 9 of 17) 324845 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr2-10174 chr2 89616667 89616877 + 6.95 0.000 Intergenic A-rich|Low_complexity|Low_complexity 21135 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr11-10034 chr11 82523284 82523494 + 6.95 0.000 Intergenic Intergenic -119476 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr14-4986 chr14 75905300 75905510 + 6.95 0.000 intron (NM_015072, intron 31 of 31) MamSINE1|SINE|tRNA-RTE 76590 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr9-8036 chr9 95672046 95672256 + 6.95 0.000 Intergenic L1PA16|LINE|L1 -155094 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr1-13008 chr1 160780974 160781184 + 6.95 0.000 Intergenic Intergenic -15095 NM_001033667 4063 Hs.403857 NM_002348 ENSG00000122224 LY9 CD229|SLAMF3|hly9|mLY9 lymphocyte antigen 9 protein-coding chr11-3054 chr11 8583989 8584199 + 6.95 0.000 intron (NM_001289058, intron 1 of 13) intron (NM_001289058, intron 1 of 13) 9882 NM_001289061 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr17-1861 chr17 30698115 30698325 + 6.95 0.000 Intergenic L2a|LINE|L2 -11388 NR_144393 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr11-6719 chr11 79816715 79816925 + 6.95 0.000 Intergenic L2c|LINE|L2 -375790 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr8-6445 chr8 61066050 61066260 + 6.95 0.000 Intergenic Intergenic -98407 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr9-8010 chr9 94410289 94410499 + 6.95 0.000 intron (NM_032558, intron 1 of 11) AluJr4|SINE|Alu 35825 NM_032558 84641 Hs.555996 NM_032558 ENSG00000148110 MFSD14B HIATL1 major facilitator superfamily domain containing 14B protein-coding chr19-7013 chr19 49625472 49625682 + 6.95 0.000 exon (NM_020719, exon 14 of 14) exon (NM_020719, exon 14 of 14) 14566 NM_006270 6237 Hs.515536 NM_006270 ENSG00000126458 RRAS R-Ras RAS related protein-coding chr6-8039 chr6 119838189 119838399 + 6.95 0.000 intron (NR_134600, intron 2 of 3) intron (NR_134600, intron 2 of 3) -176885 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr2-13365 chr2 136344668 136344878 + 6.95 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -226618 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr6-5233 chr6 135550767 135550977 + 6.95 0.000 intron (NR_152845, intron 2 of 4) intron (NR_152845, intron 2 of 4) 53071 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr15-3513 chr15 99486296 99486506 + 6.95 0.000 Intergenic Intergenic -79016 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr10-6314 chr10 109720597 109720807 + 6.95 0.000 Intergenic LTR40a|LTR|ERVL 202544 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr2-11693 chr2 9163580 9163790 + 6.95 0.000 Intergenic Intergenic -43080 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr6-2497 chr6 116406742 116406952 + 6.95 0.000 intron (NM_001322937, intron 3 of 6) intron (NM_001322937, intron 3 of 6) -35128 NR_148944 100287467 Hs.458358 NR_148944 LOC100287467 - uncharacterized LOC100287467 ncRNA chr15-3270 chr15 76644705 76644915 + 6.95 0.000 intron (NR_148227, intron 21 of 32) intron (NR_148227, intron 21 of 32) 58163 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr4-8247 chr4 139427634 139427844 + 6.95 0.000 Intergenic Intergenic 26302 NR_159964 107984036 Hs.605782 NR_159963 LOC107984036 - uncharacterized LOC107984036 ncRNA chr6-7927 chr6 109957463 109957673 + 6.95 0.000 Intergenic L1PA16|LINE|L1 -20688 NM_001286099 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr19-5772 chr19 30135151 30135361 + 6.95 0.000 Intergenic Intergenic 193017 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr6-5053 chr6 113530826 113531036 + 6.95 0.000 Intergenic Intergenic -97484 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr3-7426 chr3 116994537 116994747 + 6.95 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 73211 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr6-3770 chr6 16337665 16337875 + 6.95 0.000 intron (NM_000332, intron 7 of 8) intron (NM_000332, intron 7 of 8) 99183 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr1-9057 chr1 14617783 14617993 + 6.95 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) 19171 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr1-14668 chr1 60482486 60482696 + 6.95 0.000 Intergenic AluSg|SINE|Alu 140094 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr2-6152 chr2 236135090 236135300 + 6.95 0.000 Intergenic AluJr|SINE|Alu 33191 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr2-9725 chr2 64705520 64705730 + 6.95 0.000 Intergenic MamRep137|DNA|TcMar-Tigger -51712 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr7-8928 chr7 95577192 95577402 + 6.95 0.000 Intergenic Intergenic 19219 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase 4 protein-coding chr2-10549 chr2 237350478 237350688 + 6.95 0.000 intron (NM_057166, intron 24 of 40) intron (NM_057166, intron 24 of 40) 63581 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr11-10730 chr11 132022702 132022912 + 6.95 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 111989 NM_001352004 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr3-8476 chr3 125195476 125195686 + 6.95 0.000 intron (NM_001195483, intron 1 of 12) intron (NM_001195483, intron 1 of 12) 15818 NM_001195483 84561 Hs.658514 NM_024628 ENSG00000221955 SLC12A8 CCC9 solute carrier family 12 member 8 protein-coding chr7-4369 chr7 66812573 66812783 + 6.95 0.000 intron (NR_003934, intron 10 of 10) AluJr|SINE|Alu 32148 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseudogene 1 pseudo chr1-9685 chr1 51269294 51269504 + 6.95 0.000 intron (NM_014372, intron 1 of 2) AluJb|SINE|Alu 28562 NM_001297667 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr9-5513 chr9 105809358 105809568 + 6.95 0.000 Intergenic SATR1|Satellite|Satellite 114922 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chrX-2960 chrX 6169913 6170123 + 6.95 0.000 intron (NM_181332, intron 1 of 5) AluJb|SINE|Alu -56340 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr22-4138 chr22 44665145 44665355 + 6.95 0.000 Intergenic LTR33A|LTR|ERVL -3297 NM_001017529 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr7-4131 chr7 65257043 65257253 + 6.95 0.000 Intergenic AluY|SINE|Alu 116118 NR_146906 285905 Hs.567827 NM_182596 ENSG00000164669 INTS4P1 INTS4L1 integrator complex subunit 4 pseudogene 1 pseudo chr6-6218 chr6 17140172 17140382 + 6.95 0.000 Intergenic Intergenic 38019 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr10-4759 chr10 3455425 3455635 + 6.95 0.000 intron (NR_155743, intron 3 of 4) intron (NR_155743, intron 3 of 4) 47308 NR_155745 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr2-5530 chr2 157229649 157229859 + 6.95 0.000 Intergenic MER57B1|LTR|ERV1 -27951 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr5-6823 chr5 104928129 104928339 + 6.95 0.000 Intergenic AluY|SINE|Alu -171240 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr1-11936 chr1 63160802 63161012 + 6.95 0.000 intron (NR_038252, intron 10 of 11) intron (NR_038252, intron 10 of 11) -148436 NR_146606 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr22-3389 chr22 32849224 32849434 + 6.95 0.000 intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 48513 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chrX-1894 chrX 134542635 134542845 + 6.95 0.000 TTS (NR_024607) TTS (NR_024607) -1303 NR_030399 664617 NR_030399 ENSG00000207784 MIR542 MIRN542|hsa-mir-542|mir-542 microRNA 542 ncRNA chrX-3513 chrX 45506463 45506673 + 6.95 0.000 intron (NR_104644, intron 1 of 3) MIRb|SINE|MIR 1180 NR_104645 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA chr8-5803 chr8 144921382 144921592 + 6.95 0.000 Intergenic LTR47A2|LTR|ERVL -19310 NM_001363100 58500 Hs.532277 NM_021061 ENSG00000196150 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding chrX-5029 chrX 119862394 119862604 + 6.95 0.000 Intergenic L1MB5|LINE|L1 9234 NM_006978 7737 Hs.458365 NM_006978 ENSG00000125352 RNF113A Cwc24|RNF113|TTD5|ZNF183 ring finger protein 113A protein-coding chr5-8060 chr5 93323230 93323440 + 6.95 0.000 Intergenic Intergenic 248008 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr3-8318 chr3 64893525 64893735 + 6.95 0.000 intron (NR_038264, intron 4 of 5) L1MB7|LINE|L1 -205630 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr22-3062 chr22 39702930 39703140 + 6.95 0.000 Intergenic Intergenic 132282 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr11-6035 chr11 27783682 27783892 + 6.95 0.000 Intergenic Intergenic -61757 NM_170731 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr11-4739 chr11 76190566 76190776 + 6.95 0.000 intron (NM_004626, intron 4 of 4) MER103C|DNA|hAT-Charlie 15831 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr5-9219 chr5 181282821 181283031 + 6.95 0.000 Intergenic Intergenic 21714 NR_102759 100507602 Hs.126768 NR_102759 ENSG00000248275 TRIM52-AS1 - TRIM52 antisense RNA 1 (head to head) ncRNA chr16-4986 chr16 10043749 10043959 + 6.95 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 138213 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr12-4134 chr12 70443175 70443385 + 6.95 0.000 Intergenic FAM|SINE|Alu 76990 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 - potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding chr7-8479 chr7 50155420 50155630 + 6.95 0.000 intron (NM_001161834, intron 8 of 8) intron (NM_001161834, intron 8 of 8) 59439 NM_001161834 100130988 Hs.99248 NM_001161834 ENSG00000164500 SPATA48 C7orf72 spermatogenesis associated 48 protein-coding chr9-3455 chr9 729554 729764 + 6.95 0.000 intron (NM_001354331, intron 3 of 10) intron (NM_001354331, intron 3 of 10) 22982 NM_001354344 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr20-3524 chr20 200777 200987 + 6.95 0.000 Intergenic L1M1|LINE|L1 -11171 NM_001037732 245939 Hs.516818 NM_001037732 ENSG00000185982 DEFB128 DEFB-28|DEFB28|hBD-28 defensin beta 128 protein-coding chr11-9087 chr11 31314054 31314264 + 6.95 0.000 intron (NM_181807, intron 3 of 8) intron (NM_181807, intron 3 of 8) 55580 NM_001367979 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr22-2051 chr22 43550654 43550864 + 6.95 0.000 intron (NM_198856, intron 25 of 29) intron (NM_198856, intron 25 of 29) 34505 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr11-8833 chr11 12441149 12441359 + 6.95 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 63683 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr2-13165 chr2 120006406 120006616 + 6.95 0.000 Intergenic Intergenic -6566 NM_001330310 57669 Hs.369232 NM_020909 ENSG00000115109 EPB41L5 BE37|YMO1|YRT erythrocyte membrane protein band 4.1 like 5 protein-coding chr19-5269 chr19 48818215 48818425 + 6.95 0.000 intron (NM_016246, intron 5 of 8) AluSx|SINE|Alu -7291 NM_001284325 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr19-3929 chr19 47414337 47414547 + 6.95 0.000 intron (NM_001346148, intron 6 of 12) intron (NM_001346148, intron 6 of 12) 5085 NM_001009813 56917 Hs.380923 NM_020160 ENSG00000105419 MEIS3 MRG2 Meis homeobox 3 protein-coding chr5-7353 chr5 18011008 18011218 + 6.95 0.000 Intergenic HAL1b|LINE|L1 203839 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr5-8005 chr5 86896555 86896765 + 6.95 0.000 Intergenic Intergenic 149842 NR_105017 100505878 Hs.246405 NR_105017 LINC02059 - long intergenic non-protein coding RNA 2059 ncRNA chr7-8944 chr7 97104616 97104826 + 6.95 0.000 Intergenic Intergenic -11872 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr19-4488 chr19 5801984 5802194 + 6.95 0.000 Intergenic Intergenic -10926 NM_001161619 56931 Hs.284297 NM_020175 ENSG00000141994 DUS3L DUS3 dihydrouridine synthase 3 like protein-coding chr18-2469 chr18 43280618 43280828 + 6.95 0.000 Intergenic Intergenic -3233 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr2-6739 chr2 35936740 35936950 + 6.95 0.000 Intergenic Intergenic 418725 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr4-4249 chr4 18858561 18858771 + 6.95 0.000 Intergenic Intergenic -836791 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr1-10948 chr1 212463750 212463960 + 6.95 0.000 Intergenic Intergenic 30935 NR_026598 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr5-6881 chr5 127587820 127588030 + 6.95 0.000 Intergenic Intergenic -61096 NM_001048252 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding chr2-10210 chr2 101768208 101768418 + 6.95 0.000 intron (NM_145686, intron 2 of 30) intron (NM_145686, intron 2 of 30) 70606 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr18-2212 chr18 63994806 63995016 + 6.95 0.000 intron (NM_001348367, intron 6 of 7) MER76-int|LTR|ERVL 24830 NM_001031848 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr12-4291 chr12 123485505 123485715 + 6.95 0.000 intron (NM_178314, intron 5 of 6) intron (NM_178314, intron 5 of 6) 25906 NM_180699 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chrX-3100 chrX 145610447 145610657 + 6.95 0.000 Intergenic MER112|DNA|hAT-Charlie -207277 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr10-4882 chr10 17981813 17982023 + 6.95 0.000 intron (NM_001282734, intron 5 of 11) intron (NM_001282734, intron 5 of 11) 28644 NR_038419 100129213 Hs.568816 NR_038419 ENSG00000226083 SLC39A12-AS1 - SLC39A12 antisense RNA 1 ncRNA chr1-10140 chr1 105793683 105793893 + 6.95 0.000 Intergenic Intergenic -174853 NR_125954 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr11-8850 chr11 12893388 12893598 + 6.95 0.000 intron (NM_021961, intron 9 of 12) intron (NM_021961, intron 9 of 12) 96055 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr11-4213 chr11 63613216 63613426 + 6.95 0.000 intron (NM_007069, intron 1 of 3) AluSc8|SINE|Alu 1116 NM_007069 11145 Hs.502775 NM_007069 ENSG00000176485 PLAAT3 AdPLA|H-REV107|H-REV107-1|HRASLS3|HREV107|HREV107-1|HREV107-3|HRSL3|PLA2G16|PLAAT-3 phospholipase A and acyltransferase 3 protein-coding chr12-6073 chr12 120128325 120128535 + 6.95 0.000 intron (NM_006836, intron 57 of 57) AluSp|SINE|Alu -11677 NM_001167606 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr3-6276 chr3 71785985 71786195 + 6.95 0.000 promoter-TSS (NM_001126128) promoter-TSS (NM_001126128) -942 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr13-3905 chr13 54462586 54462796 + 6.95 0.000 Intergenic Intergenic -150643 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr1-10611 chr1 178031848 178032058 + 6.95 0.000 intron (NM_001356505, intron 5 of 33) L1MB8|LINE|L1 6023 NR_151492 111240474 NM_001356505 CRYZL2P-SEC16B - CRYZL2P-SEC16B readthrough protein-coding chr14-4405 chr14 30725576 30725786 + 6.95 0.000 intron (NM_016106, intron 23 of 24) L1PA13|LINE|L1 103362 NM_001257376 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr8-5577 chr8 86072184 86072394 + 6.95 0.000 Intergenic Intergenic -2621 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr2-5070 chr2 9439447 9439657 + 6.95 0.000 intron (NM_016207, intron 7 of 17) intron (NM_016207, intron 7 of 17) 15898 NM_016207 51692 Hs.515972 NM_016207 ENSG00000119203 CPSF3 CPSF-73|CPSF73 cleavage and polyadenylation specific factor 3 protein-coding chr19-6545 chr19 18909311 18909521 + 6.95 0.000 intron (NM_001330469, intron 3 of 10) MLT1C|LTR|ERVL-MaLR 9971 NM_199442 11316 Hs.10326 NM_007263 ENSG00000105669 COPE epsilon-COP coatomer protein complex subunit epsilon protein-coding chr10-5131 chr10 50867000 50867210 + 6.95 0.000 intron (NM_001198818, intron 1 of 13) L1PB4|LINE|L1 18522 NM_001370130 29974 Hs.282795 NM_014576 ENSG00000148584 A1CF ACF|ACF64|ACF65|APOBEC1CF|ASP APOBEC1 complementation factor protein-coding chr7-9561 chr7 141863134 141863344 + 6.95 0.000 Intergenic Intergenic -21754 NM_001370403 136242 Hs.98947 NM_001008270 ENSG00000165076 PRSS37 TRYX2 serine protease 37 protein-coding chr15-1831 chr15 42594112 42594322 + 6.95 0.000 intron (NM_020759, intron 3 of 32) L3b|LINE|CR1 18611 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr10-7244 chr10 124696717 124696927 + 6.95 0.000 intron (NM_014661, intron 2 of 4) intron (NM_014661, intron 2 of 4) -7206 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr5-6327 chr5 132020821 132021031 + 6.95 0.000 Intergenic Intergenic -8858 NM_001205250 23305 Hs.14945 NM_015256 ENSG00000164398 ACSL6 ACS2|FACL6|LACS 6|LACS2|LACS5 acyl-CoA synthetase long chain family member 6 protein-coding chr1-6442 chr1 16476230 16476440 + 6.95 0.000 intron (NR_023386, intron 13 of 14) intron (NR_023386, intron 13 of 14) 14528 NR_147211 107984921 Hs.528312 NR_147210 ENSG00000226029 LINC01772 - long intergenic non-protein coding RNA 1772 ncRNA chr4-5457 chr4 39200669 39200879 + 6.95 0.000 intron (NM_025132, intron 6 of 36) MLT1F2|LTR|ERVL-MaLR 18245 NM_001317924 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chrX-1200 chrX 70371791 70372001 + 6.95 0.000 intron (NM_012310, intron 15 of 30) SVA_D|Retroposon|SVA -51135 NM_001171193 54857 Hs.438712 NM_017711 ENSG00000130055 GDPD2 GDE3|OBDPF glycerophosphodiester phosphodiesterase domain containing 2 protein-coding chr5-9212 chr5 180859269 180859479 + 6.95 0.000 intron (NM_152283, intron 1 of 2) intron (NM_152283, intron 1 of 2) 1912 NM_152283 643836 Hs.509227 NM_152283 ENSG00000196670 ZFP62 ZET|ZNF755 ZFP62 zinc finger protein protein-coding chr1-12689 chr1 50419562 50419772 + 6.95 0.000 exon (NM_032110, exon 3 of 3) exon (NM_032110, exon 3 of 3) 3776 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr5-5315 chr5 127100405 127100615 + 6.95 0.000 Intergenic Intergenic -27018 NM_001164479 401207 Hs.49573 NM_001164478 ENSG00000164241 C5orf63 YDR286C chromosome 5 open reading frame 63 protein-coding chr12-6971 chr12 28909511 28909721 + 6.95 0.000 Intergenic L2|LINE|L2 -239662 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr1-15521 chr1 156696473 156696683 + 6.95 0.000 Intergenic AluSz|SINE|Alu 9005 NM_001878 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding chr22-2239 chr22 25366571 25366781 + 6.95 0.000 intron (NM_001135772, intron 2 of 5) intron (NM_001135772, intron 2 of 5) -4119 NM_182492 91355 Hs.634058 NM_182492 ENSG00000100068 LRP5L - LDL receptor related protein 5 like protein-coding chr1-15381 chr1 150792179 150792389 + 6.95 0.000 Intergenic AluJb|SINE|Alu 15976 NM_000396 1513 Hs.632466 NM_000396 ENSG00000143387 CTSK CTS02|CTSO|CTSO1|CTSO2|PKND|PYCD cathepsin K protein-coding chr12-3793 chr12 56098745 56098955 + 6.95 0.000 exon (NM_001982, exon 23 of 28) exon (NM_001982, exon 23 of 28) -5709 NM_006191 5036 Hs.524498 NM_006191 ENSG00000170515 PA2G4 EBP1|HG4-1|p38-2G4 proliferation-associated 2G4 protein-coding chr5-2679 chr5 38214301 38214511 + 6.95 0.000 Intergenic Intergenic -44153 NM_001205301 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr14-5099 chr14 87818856 87819066 + 6.95 0.000 Intergenic L2c|LINE|L2 -163667 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr7-7589 chr7 128147017 128147227 + 6.95 0.000 Intergenic L1ME3Cz|LINE|L1 -60750 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr5-5574 chr5 149612780 149612990 + 6.95 0.000 intron (NM_001001669, intron 4 of 12) intron (NM_001001669, intron 4 of 12) 31387 NM_001001669 389337 Hs.256206 NM_001001669 ENSG00000183111 ARHGEF37 - Rho guanine nucleotide exchange factor 37 protein-coding chr2-14611 chr2 233814036 233814246 + 6.95 0.000 intron (NM_001367507, intron 25 of 41) MLT1J1|LTR|ERVL-MaLR 38417 NM_001367507 339766 Hs.361778 NM_001287395 ENSG00000185038 MROH2A HEATR7B1 maestro heat like repeat family member 2A protein-coding chr2-11296 chr2 189284778 189284988 + 6.95 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -105122 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr1-14841 chr1 76205088 76205298 + 6.95 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 130447 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr18-1377 chr18 44997004 44997214 + 6.95 0.000 intron (NM_015559, intron 4 of 5) intron (NM_015559, intron 4 of 5) -26943 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr9-3780 chr9 126433481 126433691 + 6.95 0.000 intron (NM_033446, intron 7 of 9) intron (NM_033446, intron 7 of 9) -23082 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr11-5607 chr11 117083468 117083678 + 6.95 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 14855 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr21-671 chr21 45767923 45768133 + 6.95 0.000 intron (NM_001348243, intron 3 of 15) intron (NM_001348243, intron 3 of 15) 20014 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr20-3782 chr20 21328016 21328226 + 6.95 0.000 intron (NM_001317960, intron 3 of 29) intron (NM_001317960, intron 3 of 29) 24623 NM_001317960 22803 Hs.255932 NM_012255 ENSG00000088930 XRN2 - 5'-3' exoribonuclease 2 protein-coding chr5-3958 chr5 6733490 6733700 + 6.95 0.000 intron (NM_001171805, intron 1 of 12) intron (NM_001171805, intron 1 of 12) 20163 NM_001171805 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr4-4811 chr4 107060453 107060663 + 6.95 0.000 Intergenic Intergenic -24245 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr15-3870 chr15 91354980 91355190 + 6.95 0.000 Intergenic MIRc|SINE|MIR -108254 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr12-5533 chr12 132465035 132465245 + 6.95 0.000 Intergenic Intergenic -25011 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr22-3229 chr22 41605040 41605250 + 6.95 0.000 intron (NM_015704, intron 3 of 5) intron (NM_015704, intron 3 of 5) -15305 NM_002676 5372 Hs.75835 NM_002676 ENSG00000100417 PMM1 PMM 1|PMMH-22|Sec53 phosphomannomutase 1 protein-coding chr1-13269 chr1 226835471 226835681 + 6.95 0.000 Intergenic HERVH-int|LTR|ERV1 -34996 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr1-12790 chr1 82161720 82161930 + 6.95 0.000 Intergenic Intergenic 359372 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr9-6469 chr9 89780106 89780316 + 6.95 0.000 Intergenic Intergenic 140428 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr7-5437 chr7 37493153 37493363 + 6.95 0.000 Intergenic Intergenic -43932 NM_001206480 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr1-14987 chr1 90508474 90508684 + 6.95 0.000 Intergenic Intergenic -149171 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr1-15926 chr1 186366013 186366223 + 6.95 0.000 intron (NM_003292, intron 4 of 50) Tigger2|DNA|TcMar-Tigger 9135 NM_003292 7175 Hs.279640 NM_003292 ENSG00000047410 TPR - translocated promoter region, nuclear basket protein protein-coding chr21-1958 chr21 46075278 46075488 + 6.95 0.000 Intergenic L1PA10|LINE|L1 -22729 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr1-4661 chr1 203273406 203273616 + 6.95 0.000 Intergenic CpG -13641 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr2-11642 chr2 5950854 5951064 + 6.95 0.000 intron (NR_026832, intron 1 of 1) intron (NR_026832, intron 1 of 1) 18272 NR_026832 150622 Hs.560891 NR_026832 SILC1 LINC01105 sciatic injury induced lincRNA upregulator of SOX11 ncRNA chr4-6436 chr4 135644113 135644323 + 6.95 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 243875 NR_103762 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr9-7213 chr9 318679 318889 + 6.95 0.000 intron (NM_001193536, intron 6 of 46) intron (NM_001193536, intron 6 of 46) 45736 NM_001193536 81704 Hs.132599 NM_203447 ENSG00000107099 DOCK8 HEL-205|MRD2|ZIR8 dedicator of cytokinesis 8 protein-coding chr4-4848 chr4 110794692 110794902 + 6.95 0.000 Intergenic Intergenic 65850 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr10-4021 chr10 8821893 8822103 + 6.95 0.000 Intergenic Intergenic -75991 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LINC02676 - long intergenic non-protein coding RNA 2676 ncRNA chr14-3731 chr14 32102593 32102803 + 6.95 0.000 intron (NM_001173, intron 2 of 6) L2c|LINE|L2 25394 NM_001030055 394 Hs.592313 NM_001173 ENSG00000100852 ARHGAP5 GFI2|RhoGAP5|p190-B|p190BRhoGAP Rho GTPase activating protein 5 protein-coding chr10-7238 chr10 124011634 124011844 + 6.95 0.000 intron (NM_015892, intron 7 of 7) intron (NM_015892, intron 7 of 7) 80667 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr5-4456 chr5 5646890 5647100 + 6.95 0.000 Intergenic MLT2B4|LTR|ERVL 224318 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr15-2614 chr15 65558777 65558987 + 6.95 0.000 intron (NM_016395, intron 5 of 10) intron (NM_016395, intron 5 of 10) 28419 NM_016395 51495 Hs.512973 NM_016395 ENSG00000074696 HACD3 B-IND1|BIND1|HSPC121|PTPLAD1 3-hydroxyacyl-CoA dehydratase 3 protein-coding chr12-5734 chr12 124354420 124354630 + 6.95 0.000 exon (NM_001206654, exon 27 of 48) exon (NM_001206654, exon 27 of 48) -17283 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr17-6910 chr17 35484313 35484523 + 6.95 0.000 intron (NM_001363830, intron 2 of 4) FordPrefect_a|DNA|hAT-Tip100 3321 NM_001195790 100506736 Hs.447559 NM_001145027 ENSG00000205045 SLFN12L - schlafen family member 12 like protein-coding chr16-2976 chr16 12901673 12901883 + 6.95 0.000 5' UTR (NM_001145205, exon 1 of 2) 5' UTR (NM_001145205, exon 1 of 2) 180 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr17-7050 chr17 62316022 62316232 + 6.95 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -40472 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr7-5308 chr7 25464843 25465053 + 6.95 0.000 Intergenic Intergenic 198192 NR_157828 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr11-4967 chr11 68718988 68719198 + 6.95 0.000 intron (NM_004923, intron 6 of 9) HAL1|LINE|L1 32427 NM_004923 9633 Hs.145932 NM_004923 ENSG00000132749 TESMIN CXCDC2|MTL5|MTLT testis expressed metallothionein like protein protein-coding chr5-8791 chr5 149306675 149306885 + 6.95 0.000 intron (NM_152406, intron 6 of 18) MIRb|SINE|MIR 34921 NM_001323062 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr11-10548 chr11 120739825 120740035 + 6.95 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 79185 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr17-8108 chr17 57187051 57187261 + 6.95 0.000 Intergenic Intergenic -68695 NM_001322250 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr5-2582 chr5 72234291 72234501 + 6.95 0.000 intron (NM_015084, intron 5 of 10) intron (NM_015084, intron 5 of 10) 54609 NM_001324255 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr2-7167 chr2 203787998 203788208 + 6.95 0.000 Intergenic Intergenic -79668 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr12-3420 chr12 109445187 109445397 + 6.95 0.000 intron (NM_001101421, intron 29 of 30) intron (NM_001101421, intron 29 of 30) 32008 NM_001317399 83892 Hs.524731 NM_031954 ENSG00000110906 KCTD10 BTBD28|MSTP028|ULRO61|hBACURD3 potassium channel tetramerization domain containing 10 protein-coding chr4-8283 chr4 142096064 142096274 + 6.95 0.000 intron (NM_001331040, intron 23 of 25) intron (NM_001331040, intron 23 of 25) 459586 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr14-1801 chr14 30553609 30553819 + 6.95 0.000 intron (NR_151720, intron 3 of 3) intron (NR_151720, intron 3 of 3) -5409 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chrX-2813 chrX 134986893 134987103 + 6.95 0.000 Intergenic Intergenic -3993 NM_001163438 644538 Hs.42239 NM_001163438 ENSG00000184785 SMIM10 CXorf69 small integral membrane protein 10 protein-coding chr13-3441 chr13 104622288 104622498 + 6.95 0.000 Intergenic MLT1E|LTR|ERVL-MaLR -843474 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr6-7022 chr6 23654981 23655191 + 6.95 0.000 Intergenic MamGypLTR1a|LTR|Gypsy -471129 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr1-14445 chr1 46259911 46260121 + 6.95 0.000 exon (NM_003579, exon 5 of 18) exon (NM_003579, exon 5 of 18) 12253 NM_003579 8438 Hs.642042 NM_003579 ENSG00000085999 RAD54L HR54|RAD54A|hHR54|hRAD54 RAD54 like protein-coding chr2-7499 chr2 18753157 18753367 + 6.95 0.000 Intergenic Intergenic -163682 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr3-8960 chr3 15106175 15106385 + 6.95 0.000 Intergenic AluSz|SINE|Alu -7123 NR_126155 64145 Hs.475565 NM_022340 ENSG00000131381 RBSN Rabenosyn-5|ZFYVE20 rabenosyn, RAB effector protein-coding chr19-6696 chr19 35658130 35658340 + 6.95 0.000 intron (NM_001863, intron 3 of 3) L1MC4a|LINE|L1 -8281 NM_007000 11045 Hs.159309 NM_007000 ENSG00000105668 UPK1A TSPAN21|UP1A|UPIA|UPKA uroplakin 1A protein-coding chr19-4390 chr19 3172690 3172900 + 6.95 0.000 Intergenic Intergenic -5974 NM_003775 8698 Hs.662006 NM_003775 ENSG00000125910 S1PR4 EDG6|LPC1|S1P4|SLP4 sphingosine-1-phosphate receptor 4 protein-coding chr3-1308 chr3 184261616 184261826 + 6.95 0.000 promoter-TSS (NM_033259) promoter-TSS (NM_033259) -168 NM_033259 94032 Hs.585003 NM_033259 ENSG00000163888 CAMK2N2 CAM-KIIN|CAMKIIN calcium/calmodulin dependent protein kinase II inhibitor 2 protein-coding chr10-5291 chr10 69659437 69659647 + 6.95 0.000 Intergenic Intergenic 29295 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr11-7637 chr11 61055901 61056111 + 6.95 0.000 Intergenic MER5A|DNA|hAT-Charlie -37957 NM_001346456 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr6-5186 chr6 130652631 130652841 + 6.95 0.000 Intergenic Intergenic -174669 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr19-3724 chr19 42534256 42534466 + 6.95 0.000 intron (NR_073180, intron 2 of 2) L1MB4|LINE|L1 -5880 NM_001184816 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr21-1453 chr21 32066052 32066262 + 6.95 0.000 Intergenic Intergenic 20138 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr11-10706 chr11 130450172 130450382 + 6.95 0.000 intron (NM_139055, intron 1 of 7) CpG 1303 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr2-11272 chr2 179789970 179790180 + 6.95 0.000 intron (NR_148056, intron 1 of 9) intron (NR_148056, intron 1 of 9) -43565 NM_001352815 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding GL000194.1-12 GL000194.1 121577 121787 + 6.95 0.000 NA NA NA NA chr20-3648 chr20 9602603 9602813 + 6.95 0.000 intron (NM_020341, intron 4 of 10) intron (NM_020341, intron 4 of 10) -87710 NR_109957 101929329 Hs.589878 NR_109957 ENSG00000225988 LAMP5-AS1 - LAMP5 antisense RNA 1 ncRNA chr1-12760 chr1 70645947 70646157 + 6.95 0.000 Intergenic Intergenic -60401 NR_125938 101927244 Hs.568660 NR_125938 ENSG00000229051 LINC01788 - long intergenic non-protein coding RNA 1788 ncRNA chr12-3391 chr12 103840579 103840789 + 6.95 0.000 intron (NM_001031701, intron 1 of 13) CpG 550 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr18-2355 chr18 46223260 46223470 + 6.95 0.000 intron (NM_001008239, intron 2 of 3) intron (NM_001008239, intron 2 of 3) 49331 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr4-6042 chr4 3157285 3157495 + 6.95 0.000 intron (NM_002111, intron 28 of 66) MER68B|LTR|ERVL 82709 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr2-7340 chr2 544795 545005 + 6.95 0.000 promoter-TSS (NR_146470) promoter-TSS (NR_146470) -905 NR_146470 101927362 Hs.385749 NR_146470 ENSG00000225942 LINC01875 - long intergenic non-protein coding RNA 1875 ncRNA chr12-7851 chr12 103768669 103768879 + 6.95 0.000 Intergenic Intergenic 72460 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr10-6870 chr10 30782827 30783037 + 6.95 0.000 Intergenic Intergenic 59713 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr5-7877 chr5 73412723 73412933 + 6.95 0.000 Intergenic Intergenic 35949 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr20-2566 chr20 36802811 36803021 + 6.95 0.000 exon (NM_080627, exon 11 of 15) exon (NM_080627, exon 11 of 15) -29153 NM_001145318 79980 Hs.632268 NM_024918 ENSG00000149636 DSN1 C20orf172|KNL3|MIS13|dJ469A13.2|hKNL-3 DSN1 component of MIS12 kinetochore complex protein-coding chr20-1391 chr20 3632530 3632740 + 6.95 0.000 intron (NM_139321, intron 25 of 28) L2a|LINE|L2 30764 NM_022139 64096 Hs.302025 NM_022139 ENSG00000125861 GFRA4 - GDNF family receptor alpha 4 protein-coding chr13-3343 chr13 71460081 71460291 + 6.95 0.000 intron (NM_080759, intron 10 of 10) intron (NM_080759, intron 10 of 10) 407006 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr2-13092 chr2 112287897 112288107 + 6.95 0.000 intron (NM_198581, intron 1 of 11) intron (NM_198581, intron 1 of 11) 12405 NM_198581 376940 Hs.190477 NM_198581 ENSG00000188177 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding chr4-5691 chr4 25747682 25747892 + 6.95 0.000 3' UTR (NM_015187, exon 24 of 24) 3' UTR (NM_015187, exon 24 of 24) 91323 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr14-1693 chr14 99986317 99986527 + 6.95 0.000 intron (NM_001330221, intron 1 of 13) intron (NM_001330221, intron 1 of 13) 15000 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr11-7827 chr11 110654568 110654778 + 6.95 0.000 intron (NM_020809, intron 3 of 15) intron (NM_020809, intron 3 of 15) 57152 NM_001258415 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr8-5111 chr8 62273854 62274064 + 6.95 0.000 intron (NM_001304533, intron 1 of 6) intron (NM_001304533, intron 1 of 6) 25105 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr17-4713 chr17 31416164 31416374 + 6.95 0.000 intron (NM_032932, intron 1 of 14) intron (NM_032932, intron 1 of 14) 24594 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr9-6918 chr9 93304977 93305187 + 6.95 0.000 intron (NM_006648, intron 25 of 28) intron (NM_006648, intron 25 of 28) 41221 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr2-13535 chr2 152034830 152035040 + 6.95 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) -60957 NM_001330117 785 Hs.120725 NM_000726 ENSG00000182389 CACNB4 CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6 calcium voltage-gated channel auxiliary subunit beta 4 protein-coding chrX-4408 chrX 53224887 53225097 + 6.95 0.000 non-coding (NR_148672, exon 1 of 27) non-coding (NR_148672, exon 1 of 27) 215 NR_148672 8242 Hs.631768 NM_004187 ENSG00000126012 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine demethylase 5C protein-coding chr9-6855 chr9 76330560 76330770 + 6.95 0.000 intron (NM_001190482, intron 32 of 36) intron (NM_001190482, intron 32 of 36) 63761 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr2-13061 chr2 109549128 109549338 + 6.95 0.000 intron (NM_001321508, intron 5 of 5) intron (NM_001321508, intron 5 of 5) 64434 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr22-2179 chr22 45226924 45227134 + 6.95 0.000 intron (NM_001009880, intron 1 of 9) intron (NM_001009880, intron 1 of 9) 13740 NM_001009880 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr2-5205 chr2 42110673 42110883 + 6.95 0.000 Intergenic Intergenic -58575 NM_019063 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr4-7407 chr4 64854900 64855110 + 6.95 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 149495 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr8-5904 chr8 17381779 17381989 + 6.95 0.000 intron (NM_004686, intron 1 of 13) MIR1_Amn|SINE|MIR 31467 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr19-6372 chr19 12688965 12689175 + 6.95 0.000 TTS (NM_001316692) TTS (NM_001316692) 1072 NM_001316692 105372280 Hs.535131 NM_001316692 ENSG00000283980 GNG14 - G protein subunit gamma 14 protein-coding chrX-3586 chrX 77218127 77218337 + 6.95 0.000 Intergenic Intergenic -203700 NR_110404 101928469 Hs.640805 NR_110400 ENSG00000280870 MIR325HG MIR384HG MIR325 host gene ncRNA chr19-6785 chr19 41141116 41141326 + 6.95 0.000 Intergenic Intergenic 26789 NR_135528 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr1-15670 chr1 166129143 166129353 + 6.95 0.000 intron (NR_163271, intron 1 of 2) intron (NR_163271, intron 1 of 2) 25550 NR_030626 100126349 NR_030626 ENSG00000215952 MIR921 MIRN921|hsa-mir-921 microRNA 921 ncRNA chr1-15783 chr1 175514492 175514702 + 6.95 0.000 intron (NM_003285, intron 2 of 22) intron (NM_003285, intron 2 of 22) 228998 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr5-3749 chr5 45402839 45403049 + 6.95 0.000 intron (NM_021072, intron 3 of 7) FRAM|SINE|Alu 293436 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr8-5684 chr8 122642466 122642676 + 6.95 0.000 Intergenic LTR16B1|LTR|ERVL 51535 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr1-13510 chr1 5345892 5346102 + 6.95 0.000 Intergenic LTR78B|LTR|ERV1 516744 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr11-6785 chr11 88277495 88277705 + 6.95 0.000 Intergenic Intergenic 60136 NM_001814 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding chr10-3025 chr10 108817717 108817927 + 6.95 0.000 Intergenic Intergenic -748529 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chrX-1606 chrX 102976325 102976535 + 6.95 0.000 Intergenic LTR24|LTR|ERV1 39158 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr2-7103 chr2 177179513 177179723 + 6.95 0.000 Intergenic MER49|LTR|ERV1 32793 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr8-3006 chr8 116631354 116631564 + 6.95 0.000 Intergenic Intergenic -20641 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr8-4091 chr8 68470504 68470714 + 6.95 0.000 intron (NR_146186, intron 4 of 12) MLT1A0|LTR|ERVL-MaLR -139118 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr8-3444 chr8 85959220 85959430 + 6.95 0.000 Intergenic Intergenic 110343 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr1-12547 chr1 27707625 27707835 + 6.95 0.000 Intergenic AluSc|SINE|Alu -18231 NM_001143914 199870 Hs.469359 NM_152660 ENSG00000009780 FAM76A - family with sequence similarity 76 member A protein-coding chr10-9011 chr10 121935724 121935934 + 6.95 0.000 intron (NR_120495, intron 1 of 1) LTR22A|LTR|ERVK -7028 NM_001288736 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr2-12255 chr2 44804396 44804606 + 6.95 0.000 Intergenic Intergenic 134387 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr1-14090 chr1 30326995 30327205 + 6.95 0.000 Intergenic Intergenic -289488 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr22-4213 chr22 46320516 46320726 + 6.95 0.000 intron (NM_016426, intron 7 of 11) intron (NM_016426, intron 7 of 11) -14780 NR_104240 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr22-2953 chr22 49373974 49374184 + 6.95 0.000 Intergenic Intergenic 169387 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr12-5822 chr12 28700829 28701039 + 6.95 0.000 Intergenic Intergenic -448344 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr17-2335 chr17 57955369 57955579 + 6.95 0.000 promoter-TSS (NM_001271875) promoter-TSS (NM_001271875) -62 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr2-11657 chr2 7029758 7029968 + 6.95 0.000 intron (NM_001349186, intron 6 of 7) intron (NM_001349186, intron 6 of 7) 48017 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr11-6901 chr11 106304254 106304464 + 6.95 0.000 Intergenic Intergenic 52952 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr11-6272 chr11 58849576 58849786 + 6.95 0.000 Intergenic L1PA7|LINE|L1 -4977 NM_145016 219970 Hs.254271 NM_145016 ENSG00000156689 GLYATL2 BXMAS2-10|GATF-B glycine-N-acyltransferase like 2 protein-coding chr15-4128 chr15 81185890 81186100 + 6.95 0.000 Intergenic Intergenic -10884 NM_001352685 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding chr12-6001 chr12 100480391 100480601 + 6.95 0.000 intron (NR_135146, intron 1 of 10) MLT1H-int|LTR|ERVL-MaLR 6630 NM_001206979 9971 Hs.282735 NM_005123 ENSG00000012504 NR1H4 BAR|FXR|HRR-1|HRR1|PFIC5|RIP14 nuclear receptor subfamily 1 group H member 4 protein-coding chr10-6690 chr10 118964537 118964747 + 6.95 0.000 Intergenic THE1B|LTR|ERVL-MaLR -65072 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr16-3763 chr16 27311400 27311610 + 6.95 0.000 Intergenic MamRep4096|DNA|hAT-Tip100 -2469 NM_001257407 3566 Hs.513457 NM_000418 ENSG00000077238 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding chr20-2419 chr20 22601905 22602115 + 6.95 0.000 intron (NR_109883, intron 1 of 2) intron (NR_109883, intron 1 of 2) 5507 NR_109883 101929685 Hs.563018 NR_109883 ENSG00000237396 LNCNEF LINC01384|lncRNA-NEF lncRNA neighboring enhancer of FOXA2 ncRNA chr9-6791 chr9 32723183 32723393 + 6.95 0.000 Intergenic Intergenic -60252 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chrX-4031 chrX 17529840 17530050 + 6.95 0.000 intron (NR_135631, intron 1 of 1) intron (NR_135631, intron 1 of 1) 1510 NR_135631 101928389 Hs.686933 NR_135631 ENSG00000235834 LOC101928389 - uncharacterized LOC101928389 ncRNA chr2-12238 chr2 43959028 43959238 + 6.95 0.000 intron (NM_133259, intron 13 of 37) intron (NM_133259, intron 13 of 37) 36856 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr1-13104 chr1 186535796 186536006 + 6.95 0.000 Intergenic Intergenic -74787 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding chr5-8393 chr5 124924741 124924951 + 6.95 0.000 Intergenic L2a|LINE|L2 -111985 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr1-10654 chr1 182803222 182803432 + 6.95 0.000 intron (NM_001200056, intron 3 of 12) intron (NM_001200056, intron 3 of 12) 13554 NM_001200056 80896 Hs.496969 NM_030769 ENSG00000135838 NPL C112|C1orf13|NAL|NPL1 N-acetylneuraminate pyruvate lyase protein-coding chr14-2706 chr14 88316236 88316446 + 6.95 0.000 intron (NM_021161, intron 1 of 6) intron (NM_021161, intron 1 of 6) 6928 NM_138317 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr10-7382 chr10 2985953 2986163 + 6.95 0.000 Intergenic Intergenic 80875 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr12-7220 chr12 50530653 50530863 + 6.95 0.000 intron (NM_173602, intron 1 of 37) L2|LINE|L2 25773 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr5-8734 chr5 145510457 145510667 + 6.95 0.000 Intergenic Intergenic 324780 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr1-4701 chr1 241658484 241658694 + 6.95 0.000 intron (NM_001367482, intron 1 of 27) AluJr|SINE|Alu 6308 NM_001367482 128025 Hs.97527 NM_144625 ENSG00000162843 WDR64 - WD repeat domain 64 protein-coding chr10-8886 chr10 113705671 113705881 + 6.95 0.000 intron (NM_001227, intron 2 of 6) intron (NM_001227, intron 2 of 6) -3569 NM_001267058 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding chr20-3606 chr20 5371010 5371220 + 6.95 0.000 Intergenic AluJr|SINE|Alu -54383 NM_144773 128674 Hs.375029 NM_144773 ENSG00000101292 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding chr1-9023 chr1 11641309 11641519 + 6.95 0.000 Intergenic AluSz|SINE|Alu -12993 NM_183412 93611 Hs.556006 NM_033182 ENSG00000132879 FBXO44 FBG3|FBX30|FBX6A|Fbx44|Fbxo6a F-box protein 44 protein-coding chr7-9724 chr7 156950305 156950515 + 6.95 0.000 exon (NM_138400, exon 1 of 11) exon (NM_138400, exon 1 of 11) 698 NM_001353366 64434 Hs.15825 NM_138400 ENSG00000146909 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding chr18-2974 chr18 23057756 23057966 + 6.95 0.000 Intergenic Intergenic -76703 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr19-4881 chr19 40384936 40385146 + 6.95 0.000 intron (NM_144685, intron 1 of 3) L2a|LINE|L2 5140 NM_144685 147746 Hs.79363 NM_144685 ENSG00000160396 HIPK4 - homeodomain interacting protein kinase 4 protein-coding chr6-2705 chr6 42710462 42710672 + 6.95 0.000 intron (NM_000322, intron 1 of 2) intron (NM_000322, intron 1 of 2) 12030 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr13-2145 chr13 105611499 105611709 + 6.95 0.000 Intergenic Intergenic -95226 NR_046391 144920 Hs.567700 NR_046391 LINC00343 LINC00344|NCRNA00343|NCRNA00344 long intergenic non-protein coding RNA 343 ncRNA chr3-7505 chr3 165755461 165755671 + 6.95 0.000 Intergenic Charlie10b|DNA|hAT-Charlie 81857 NM_000055 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr1-10131 chr1 102269717 102269927 + 6.95 0.000 Intergenic L1MB7|LINE|L1 -272588 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr1-7685 chr1 21201308 21201518 + 6.95 0.000 Intergenic MLT2B4|LTR|ERVL -24516 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr12-4142 chr12 76409074 76409284 + 6.95 0.000 intron (NM_001319655, intron 2 of 20) MER39|LTR|ERV1 14106 NM_001319655 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr7-8742 chr7 76829290 76829500 + 6.95 0.000 Intergenic Intergenic -151427 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr2-11732 chr2 10724230 10724440 + 6.95 0.000 intron (NM_001039362, intron 2 of 13) intron (NM_001039362, intron 2 of 13) 2705 NM_001039362 245973 Hs.580464 NM_144583 ENSG00000143882 ATP6V1C2 ATP6C2|VMA5 ATPase H+ transporting V1 subunit C2 protein-coding chr12-5673 chr12 95404547 95404757 + 6.95 0.000 Intergenic AluJr4|SINE|Alu -69500 NM_001317183 10988 Hs.444986 NM_006838 ENSG00000111142 METAP2 MAP2|MNPEP|p67eIF2 methionyl aminopeptidase 2 protein-coding chr3-2029 chr3 72888022 72888232 + 6.95 0.000 promoter-TSS (NR_138564) promoter-TSS (NR_138564) 81 NM_001080393 727936 Hs.710275 NM_001080393 ENSG00000172986 GXYLT2 GLT8D4 glucoside xylosyltransferase 2 protein-coding chr2-4768 chr2 26580992 26581202 + 6.95 0.000 TTS (NM_001029881) TTS (NM_001029881) 18510 NM_001322426 339778 Hs.407083 NM_001105519 ENSG00000173557 C2orf70 - chromosome 2 open reading frame 70 protein-coding chr10-3275 chr10 128995817 128996027 + 6.95 0.000 Intergenic Intergenic 83089 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr19-1927 chr19 3856953 3857163 + 6.95 0.000 intron (NR_027149, intron 1 of 2) intron (NR_027149, intron 1 of 2) 11980 NM_015174 23217 Hs.65750 NM_015174 ENSG00000105278 ZFR2 KIAA1086 zinc finger RNA binding protein 2 protein-coding chrX-2441 chrX 80259574 80259784 + 6.95 0.000 intron (NR_110646, intron 5 of 5) intron (NR_110646, intron 5 of 5) 75639 NR_110646 101060146 Hs.546064 NR_110646 ENSG00000278530 CHMP1B2P - charged multivesicular body protein 1B2, pseudogene pseudo chr2-12989 chr2 105889564 105889774 + 6.95 0.000 intron (NM_001004720, intron 3 of 3) AluJr|SINE|Alu 37822 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr16-6151 chr16 23163731 23163941 + 6.95 0.000 Intergenic AluSp|SINE|Alu -14566 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr12-4730 chr12 51486249 51486459 + 6.95 0.000 intron (NM_001039960, intron 17 of 24) intron (NM_001039960, intron 17 of 24) 61237 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr20-1395 chr20 4108604 4108814 + 6.95 0.000 Intergenic MER5A|DNA|hAT-Charlie -40070 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chrX-2641 chrX 111294306 111294516 + 6.95 0.000 3' UTR (NM_178153, exon 7 of 7) 3' UTR (NM_178153, exon 7 of 7) -23928 NM_014289 827 Hs.496593 NM_014289 ENSG00000077274 CAPN6 CANPX|CAPNX|CalpM|DJ914P14.1 calpain 6 protein-coding chr6-5540 chr6 168362312 168362522 + 6.95 0.000 Intergenic Intergenic -42640 NR_104425 168002 Hs.673059 NM_214462 ENSG00000164488 DACT2 C6orf116|DAPPER2|DPR2|bA503C24.7 dishevelled binding antagonist of beta catenin 2 protein-coding chrX-2540 chrX 99307189 99307399 + 6.95 0.000 Intergenic Intergenic 1102979 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr11-6251 chr11 57004013 57004223 + 6.95 0.000 Intergenic Intergenic 15204 NM_001005323 390181 Hs.554520 NM_001005323 ENSG00000181273 OR5AK2 - olfactory receptor family 5 subfamily AK member 2 protein-coding chr12-4287 chr12 122492085 122492295 + 6.95 0.000 intron (NM_001350935, intron 3 of 10) intron (NM_001350935, intron 3 of 10) 8742 NM_001350937 55596 Hs.37706 NM_017612 ENSG00000033030 ZCCHC8 - zinc finger CCHC-type containing 8 protein-coding chr7-8325 chr7 42097948 42098158 + 6.95 0.000 intron (NM_000168, intron 3 of 14) MIRb|SINE|MIR 139156 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr4-8055 chr4 121321047 121321257 + 6.95 0.000 Intergenic HAL1ME|LINE|L1 59866 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr4-5926 chr4 149291793 149292003 + 6.95 0.000 Intergenic L1MC4|LINE|L1 137603 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr10-7417 chr10 5234128 5234338 + 6.95 0.000 Intergenic Intergenic 37003 NR_149060 110806285 NR_149060 ENSG00000224034 LINC02561 - long intergenic non-protein coding RNA 2561 ncRNA chr3-7041 chr3 173033313 173033523 + 6.95 0.000 intron (NM_031955, intron 3 of 10) intron (NM_031955, intron 3 of 10) 107817 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr17-5809 chr17 64472760 64472970 + 6.95 0.000 intron (NM_001369493, intron 9 of 9) L1MC5a|LINE|L1 23750 NM_001291316 284021 Hs.631749 NM_001085423 ENSG00000271605 MILR1 Allergin-1|C17orf60|MCA-32|MCA32 mast cell immunoglobulin like receptor 1 protein-coding chr12-4426 chr12 8735088 8735298 + 6.95 0.000 intron (NR_147950, intron 2 of 8) intron (NR_147950, intron 2 of 8) 37202 NR_147949 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr14-3906 chr14 100155606 100155816 + 6.95 0.000 intron (NM_206918, intron 1 of 2) intron (NM_206918, intron 1 of 2) 3934 NM_206918 123099 Hs.159643 NM_206918 ENSG00000168350 DEGS2 C14orf66|DES2|FADS8 delta 4-desaturase, sphingolipid 2 protein-coding chr11-7854 chr11 117634478 117634688 + 6.95 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 162633 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr6-7617 chr6 77654016 77654226 + 6.95 0.000 intron (NM_001322247, intron 1 of 4) MER58A|DNA|hAT-Charlie 1082 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr20-2646 chr20 43831236 43831446 + 6.95 0.000 Intergenic AluJb|SINE|Alu -63377 NR_134577 105372626 Hs.130555 NR_134577 ENSG00000233277 LINC01728 - long intergenic non-protein coding RNA 1728 ncRNA chr15-4481 chr15 50548563 50548773 + 6.95 0.000 Intergenic L1M5|LINE|L1 -2002 NM_203494 373509 Hs.677758 NM_203494 ENSG00000170236 USP50 - ubiquitin specific peptidase 50 protein-coding chr11-7605 chr11 45306678 45306888 + 6.95 0.000 Intergenic L2a|LINE|L2 -20442 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr8-5019 chr8 13234164 13234374 + 6.95 0.000 intron (NM_001348082, intron 5 of 16) intron (NM_001348082, intron 5 of 16) 42252 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr6-3875 chr6 52132288 52132498 + 6.95 0.000 Intergenic Intergenic -11956 NR_029713 406989 NR_029713 ENSG00000207604 MIR206 MIRN206|miRNA206|mir-206 microRNA 206 ncRNA chr18-3006 chr18 24986837 24987047 + 6.95 0.000 intron (NR_146903, intron 1 of 1) intron (NR_146903, intron 1 of 1) 1037 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr6-5259 chr6 137172549 137172759 + 6.95 0.000 intron (NM_181310, intron 1 of 4) intron (NM_181310, intron 1 of 4) 990 NM_181310 116379 Hs.126891 NM_052962 ENSG00000164485 IL22RA2 CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16 interleukin 22 receptor subunit alpha 2 protein-coding chr5-6853 chr5 117704773 117704983 + 6.95 0.000 Intergenic L2a|LINE|L2 -25483 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr7-6324 chr7 141933351 141933561 + 6.95 0.000 intron (NM_013252, intron 5 of 6) L2a|LINE|L2 13518 NM_013252 23601 Hs.446235 NM_013252 ENSG00000258227 CLEC5A CLECSF5|MDL-1|MDL1 C-type lectin domain containing 5A protein-coding chr3-10710 chr3 153198333 153198543 + 6.95 0.000 Intergenic Intergenic 36212 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr7-4581 chr7 11417299 11417509 + 6.95 0.000 intron (NM_015204, intron 16 of 26) intron (NM_015204, intron 16 of 26) 414794 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chrX-4878 chrX 106461644 106461854 + 6.95 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -150181 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chrX-1754 chrX 51272375 51272585 + 6.95 0.000 Intergenic LTR50|LTR|ERVL -59751 NM_153183 170685 Hs.375178 NM_153183 ENSG00000122824 NUDT10 APS2|DIPP3-alpha|DIPP3a nudix hydrolase 10 protein-coding chrX-3174 chrX 34629540 34629750 + 6.95 0.000 3' UTR (NM_031442, exon 3 of 3) 3' UTR (NM_031442, exon 3 of 3) 27640 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr1-8240 chr1 30536142 30536352 + 6.95 0.000 Intergenic Intergenic -182525 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr10-6808 chr10 14153863 14154073 + 6.95 0.000 intron (NR_134578, intron 2 of 3) LTR33A|LTR|ERVL 79684 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr9-5171 chr9 68447381 68447591 + 6.95 0.000 intron (NM_021965, intron 6 of 10) MIRb|SINE|MIR -89620 NR_015423 572558 Hs.552819 NR_015423 ENSG00000224958 PGM5-AS1 FAM233A PGM5 antisense RNA 1 ncRNA chr3-11179 chr3 192198740 192198950 + 6.95 0.000 intron (NM_004113, intron 4 of 5) intron (NM_004113, intron 4 of 5) -39785 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr9-4418 chr9 6718258 6718468 + 6.95 0.000 Intergenic AluJb|SINE|Alu -2500 NM_001146696 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr5-4007 chr5 27267465 27267675 + 6.95 0.000 Intergenic LTR12E|LTR|ERV1 -204722 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr12-4253 chr12 114396863 114397073 + 6.95 0.000 intron (NM_000192, intron 5 of 8) intron (NM_000192, intron 5 of 8) 9176 NM_181486 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box transcription factor 5 protein-coding chr3-8459 chr3 122970157 122970367 + 6.95 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) 5872 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr3-9685 chr3 64352123 64352333 + 6.95 0.000 Intergenic Intergenic -84055 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr8-2731 chr8 101701118 101701328 + 6.95 0.000 intron (NM_001040624, intron 6 of 7) intron (NM_001040624, intron 6 of 7) 89746 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr8-3971 chr8 50522104 50522314 + 6.95 0.000 intron (NR_135797, intron 9 of 20) Tigger1|DNA|TcMar-Tigger 358078 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr5-5437 chr5 137991907 137992117 + 6.95 0.000 intron (NM_001101801, intron 6 of 21) AluJb|SINE|Alu -40762 NR_037900 100130172 Hs.616629 NR_037900 LOC100130172 - uncharacterized LOC100130172 ncRNA chr1-11328 chr1 24059141 24059351 + 6.95 0.000 intron (NM_152372, intron 35 of 36) AluJb|SINE|Alu 52889 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr19-7099 chr19 57096252 57096462 + 6.95 0.000 Intergenic Intergenic -23784 NM_020903 57663 Hs.515632 NM_020903 ENSG00000131864 USP29 HOM-TES-84/86 ubiquitin specific peptidase 29 protein-coding chr6-6689 chr6 168437788 168437998 + 6.95 0.000 Intergenic Intergenic -3291 NM_001166412 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr21-1834 chr21 41222432 41222642 + 6.95 0.000 intron (NM_138991, intron 1 of 7) L2a|LINE|L2 -37298 NR_148920 191585 Hs.472492 NR_148920 ENSG00000280109 PLAC4 C21orf115|PRED78 placenta enriched 4 ncRNA chr5-2474 chr5 139772472 139772682 + 6.95 0.000 Intergenic L2a|LINE|L2 -23231 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chrX-3229 chrX 65108090 65108300 + 6.95 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -73454 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr12-7099 chr12 44677605 44677815 + 6.95 0.000 intron (NM_006159, intron 13 of 20) L2c|LINE|L2 197951 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr5-7803 chr5 65576712 65576922 + 6.95 0.000 intron (NM_001278929, intron 4 of 9) (ATATAG)n|Simple_repeat|Simple_repeat 13521 NM_001278927 23398 Hs.121432 NM_015342 ENSG00000113593 PPWD1 - peptidylprolyl isomerase domain and WD repeat containing 1 protein-coding chr11-9361 chr11 47369423 47369633 + 6.95 0.000 intron (NM_001080547, intron 2 of 4) intron (NM_001080547, intron 2 of 4) 9019 NM_003120 6688 Hs.502511 NM_003120 ENSG00000066336 SPI1 OF|PU.1|SFPI1|SPI-1|SPI-A Spi-1 proto-oncogene protein-coding chr11-9815 chr11 71342985 71343195 + 6.95 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 80264 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr10-7043 chr10 80922945 80923155 + 6.95 0.000 Intergenic Intergenic 273253 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr4-7041 chr4 27487721 27487931 + 6.95 0.000 Intergenic L1MEf|LINE|L1 270347 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr3-9299 chr3 42998527 42998737 + 6.95 0.000 intron (NM_001129908, intron 1 of 4) intron (NM_001129908, intron 1 of 4) 19321 NM_001129908 729085 Hs.729533 NM_001129908 ENSG00000144649 GASK1A C3orf41|FAM198A golgi associated kinase 1A protein-coding chr19-6753 chr19 39292809 39293019 + 6.95 0.000 Intergenic AluSz6|SINE|Alu -3493 NM_172140 282618 Hs.406745 NM_172140 ENSG00000182393 IFNL1 IL-29|IL29 interferon lambda 1 protein-coding chr4-5571 chr4 159603163 159603373 + 6.95 0.000 Intergenic Intergenic 174516 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr5-4114 chr5 74947862 74948072 + 6.95 0.000 Intergenic Intergenic -81001 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr10-5282 chr10 69073981 69074191 + 6.95 0.000 Intergenic Intergenic -13517 NM_001321053 5552 Hs.1908 NM_002727 ENSG00000122862 SRGN PPG|PRG|PRG1 serglycin protein-coding chr5-2608 chr5 134567342 134567552 + 6.95 0.000 intron (NM_015288, intron 9 of 10) intron (NM_015288, intron 9 of 10) 41339 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr11-8645 chr11 2929675 2929885 + 6.95 0.000 promoter-TSS (NM_003311).2 promoter-TSS (NM_003311).2 -360 NM_003311 7262 Hs.154036 NM_003311 ENSG00000181649 PHLDA2 BRW1C|BWR1C|HLDA2|IPL|TSSC3 pleckstrin homology like domain family A member 2 protein-coding chr10-6850 chr10 26103171 26103381 + 6.95 0.000 intron (NM_017433, intron 17 of 34) L1PA5|LINE|L1 -113031 NM_000818 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr8-4445 chr8 112906066 112906276 + 6.95 0.000 intron (NM_001363185, intron 8 of 66) MLT1A0|LTR|ERVL-MaLR 262678 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr5-7164 chr5 3909894 3910104 + 6.95 0.000 Intergenic Intergenic 314167 NM_024337 79192 Hs.424156 NM_024337 ENSG00000170549 IRX1 IRX-5|IRXA1 iroquois homeobox 1 protein-coding chr7-7468 chr7 93178700 93178910 + 6.95 0.000 Intergenic MER1A|DNA|hAT-Charlie -30420 NM_001350084 219285 Hs.489118 NM_152703 ENSG00000177409 SAMD9L ATXPC|C7orf6|DRIF2|UEF1 sterile alpha motif domain containing 9 like protein-coding chr18-896 chr18 49762812 49763022 + 6.95 0.000 Intergenic Intergenic 50616 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr5-5649 chr5 157463970 157464180 + 6.95 0.000 intron (NM_001172292, intron 2 of 4) L2c|LINE|L2 -3975 NR_136205 102724404 Hs.570889 NR_136204 LOC102724404 - uncharacterized LOC102724404 ncRNA chr20-3553 chr20 2704883 2705093 + 6.95 0.000 intron (NM_001110514, intron 2 of 17) intron (NM_001110514, intron 2 of 17) 12110 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr14-2152 chr14 88621093 88621303 + 6.95 0.000 exon (NM_183387, exon 37 of 43) exon (NM_183387, exon 37 of 43) 26778 NM_207662 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr10-5452 chr10 79000926 79001136 + 6.95 0.000 intron (NR_015429, intron 3 of 7) intron (NR_015429, intron 3 of 7) 66417 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr17-6848 chr17 18635079 18635289 + 6.95 0.000 TTS (NM_001039397) TTS (NM_001039397) 9243 NM_001039397 254272 Hs.434123 NM_001039397 ENSG00000189375 TBC1D28 - TBC1 domain family member 28 protein-coding chr1-15125 chr1 102523064 102523274 + 6.95 0.000 Intergenic HAL1M8|LINE|L1 -525935 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr17-5661 chr17 50166270 50166480 + 6.95 0.000 intron (NR_135553, intron 1 of 8) intron (NR_135553, intron 1 of 8) 370 NM_001135697 6442 Hs.463412 NM_000023 ENSG00000108823 SGCA 50DAG|ADL|DAG2|DMDA2|LGMD2D|LGMDR3|SCARMD1|adhalin sarcoglycan alpha protein-coding chr4-2512 chr4 36715124 36715334 + 6.95 0.000 Intergenic HERVL-int|LTR|ERVL -73329 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA chr11-8654 chr11 3399410 3399620 + 6.95 0.000 intron (NR_024248, intron 3 of 10) intron (NR_024248, intron 3 of 10) -7600 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr13-4141 chr13 83766308 83766518 + 6.95 0.000 Intergenic Intergenic 115980 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr14-2909 chr14 38829957 38830167 + 6.95 0.000 intron (NR_039982, intron 4 of 4) HAL1|LINE|L1 -52534 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr7-4315 chr7 31713560 31713770 + 6.95 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 26450 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr10-4128 chr10 75672609 75672819 + 6.95 0.000 intron (NR_131178, intron 1 of 7) AluSz|SINE|Alu 25205 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr11-6206 chr11 46099073 46099283 + 6.95 0.000 intron (NR_147890, intron 1 of 18) intron (NR_147890, intron 1 of 18) 21641 NM_001352029 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr21-1222 chr21 45355392 45355602 + 6.95 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -13507 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chrX-4736 chrX 92122319 92122529 + 6.95 0.000 intron (NM_001168362, intron 2 of 4) intron (NM_001168362, intron 2 of 4) 286963 NM_001168362 27328 Hs.655673 NM_014522 ENSG00000102290 PCDH11X PCDH-X|PCDH-Y|PCDH11|PCDH11Y|PCDH22|PCDHX|PPP1R119 protocadherin 11 X-linked protein-coding chr11-4719 chr11 69719516 69719726 + 6.95 0.000 Intergenic Intergenic -15599 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr22-3647 chr22 22098290 22098500 + 6.95 0.000 Intergenic Intergenic -54461 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr1-10754 chr1 200195809 200196019 + 6.95 0.000 Intergenic L2a|LINE|L2 153089 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr3-9046 chr3 23626564 23626774 + 6.95 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -179286 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr19-2736 chr19 37933640 37933850 + 6.95 0.000 intron (NM_015073, intron 1 of 21) intron (NM_015073, intron 1 of 21) 26537 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr3-7908 chr3 136765845 136766055 + 6.95 0.000 Intergenic L1ME1|LINE|L1 -13572 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr12-7506 chr12 68162592 68162802 + 6.95 0.000 Intergenic Intergenic -2957 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr7-7524 chr7 104901231 104901441 + 6.95 0.000 intron (NR_027374, intron 3 of 3) intron (NR_027374, intron 3 of 3) 25309 NR_027374 723809 Hs.124316 NR_027374 ENSG00000225329 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA chr18-2613 chr18 26575276 26575486 + 6.95 0.000 intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) 16154 NR_107024 102466874 NR_107024 ENSG00000276221 MIR8057 hsa-mir-8057 microRNA 8057 ncRNA chr14-2416 chr14 62280631 62280841 + 6.95 0.000 Intergenic MIRb|SINE|MIR -140763 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr16-4391 chr16 49931716 49931926 + 6.95 0.000 Intergenic MIRb|SINE|MIR -73902 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr6-7807 chr6 99811551 99811761 + 6.95 0.000 Intergenic L2c|LINE|L2 -182382 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr17-7044 chr17 61479743 61479953 + 6.95 0.000 intron (NM_001321120, intron 6 of 8) intron (NM_001321120, intron 6 of 8) 23360 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr4-7179 chr4 40552556 40552766 + 6.95 0.000 intron (NM_001371114, intron 1 of 5) L2a|LINE|L2 -36676 NM_019027 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr1-6409 chr1 11698207 11698417 + 6.95 0.000 intron (NM_198545, intron 1 of 6) intron (NM_198545, intron 1 of 6) 6602 NM_198545 374946 Hs.632364 NM_198545 ENSG00000162490 DRAXIN AGPA3119|C1orf187|UNQ3119|neucrin dorsal inhibitory axon guidance protein protein-coding chr6-4738 chr6 67532241 67532451 + 6.95 0.000 Intergenic L1PA7|LINE|L1 -523005 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chrX-3156 chrX 21955648 21955858 + 6.95 0.000 intron (NM_004595, intron 1 of 10) intron (NM_004595, intron 1 of 10) 15044 NM_004595 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr19-4429 chr19 4098032 4098242 + 6.95 0.000 intron (NM_030662, intron 7 of 10) L1MB5|LINE|L1 25992 NM_030662 5605 Hs.465627 NM_030662 ENSG00000126934 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding chr5-3956 chr5 6517421 6517631 + 6.95 0.000 Intergenic Intergenic -64610 NR_024423 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 SRHC long intergenic non-protein coding RNA 1018 ncRNA chr20-1812 chr20 62805645 62805855 + 6.95 0.000 promoter-TSS (NR_102430) promoter-TSS (NR_102430) -163 NR_102430 101409261 Hs.593952 NR_102430 ENSG00000229873 OGFR-AS1 - OGFR antisense RNA 1 ncRNA chr20-3905 chr20 32248232 32248442 + 6.95 0.000 Intergenic AluJr|SINE|Alu 10542 NR_031726 100302183 NR_031726 ENSG00000284125 MIR1825 MIRN1825|hsa-mir-1825 microRNA 1825 ncRNA chr9-6374 chr9 23248111 23248321 + 6.95 0.000 Intergenic L1PA7|LINE|L1 424183 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr5-6826 chr5 107759200 107759410 + 6.95 0.000 Intergenic L3|LINE|CR1 -88368 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr17-3171 chr17 76370515 76370725 + 6.95 0.000 Intergenic Intergenic -12584 NM_001355139 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr18-1496 chr18 77117768 77117978 + 6.95 0.000 intron (NM_001025100, intron 1 of 3) intron (NM_001025100, intron 1 of 3) 14910 NM_001025100 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr11-8639 chr11 2626540 2626750 + 6.95 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 73353 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr11-6187 chr11 45371353 45371563 + 6.95 0.000 promoter-TSS (NR_122071) promoter-TSS (NR_122071) 61 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr19-3370 chr19 11673626 11673836 + 6.95 0.000 promoter-TSS (NR_028594) promoter-TSS (NR_028594) -267 NR_028594 401898 Hs.672384 NM_001013691 ZNF833P ZNF833 zinc finger protein 833, pseudogene pseudo chr1-15088 chr1 98052756 98052966 + 6.95 0.000 Intergenic Intergenic -3168 NR_046105 400765 Hs.451802 NM_001001688 ENSG00000225206 MIR137HG - MIR137 host gene ncRNA chr19-6574 chr19 20370348 20370558 + 6.95 0.000 Intergenic HERVS71-int|LTR|ERV1 28901 NR_036053 100302179 NR_036053 ENSG00000238517 MIR1270 MIR1270-1|MIR1270-2|MIRN1270|hsa-mir-1270|hsa-mir-1270-1|mir-1270 microRNA 1270 ncRNA chr12-7060 chr12 41234482 41234692 + 6.95 0.000 intron (NM_001164595, intron 3 of 9) intron (NM_001164595, intron 3 of 9) 46267 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr5-1418 chr5 176467049 176467259 + 6.95 0.000 intron (NM_014613, intron 1 of 10) intron (NM_014613, intron 1 of 10) 18769 NM_014613 23197 Hs.484242 NM_014613 ENSG00000113194 FAF2 ETEA|UBXD8|UBXN3B Fas associated factor family member 2 protein-coding chr9-8105 chr9 98964748 98964958 + 6.95 0.000 intron (NM_001855, intron 2 of 41) intron (NM_001855, intron 2 of 41) 20946 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr1-10552 chr1 171918121 171918331 + 6.95 0.000 intron (NM_001278252, intron 1 of 14) intron (NM_001278252, intron 1 of 14) 54034 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 - DNM3 intronic transcript 1 ncRNA chr1-2966 chr1 147541804 147542014 + 6.95 0.000 intron (NM_004326, intron 1 of 9) G-rich|Low_complexity|Low_complexity 408 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS BCL9 transcription coactivator protein-coding chr5-7882 chr5 74418891 74419101 + 6.95 0.000 intron (NR_126354, intron 2 of 2) intron (NR_126354, intron 2 of 2) 96510 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chrX-2413 chrX 74707305 74707515 + 6.95 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -92786 NM_183353 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr2-10452 chr2 212928831 212929041 + 6.95 0.000 Intergenic MIRb|SINE|MIR -2600 NR_039936 100616472 NR_039936 ENSG00000283637 MIR4776-2 mir-4776-2 microRNA 4776-2 ncRNA chr12-2297 chr12 116165044 116165254 + 6.95 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) -16495 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr3-9600 chr3 56490437 56490647 + 6.95 0.000 Intergenic AluSz|SINE|Alu -22075 NR_132749 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr20-3056 chr20 3766258 3766468 + 6.95 0.000 intron (NR_047675, intron 1 of 5) intron (NR_047675, intron 1 of 5) 1390 NM_001258429 54976 Hs.274422 NM_017874 ENSG00000101220 C20orf27 - chromosome 20 open reading frame 27 protein-coding chr7-4832 chr7 101474662 101474872 + 6.95 0.000 intron (NM_133457, intron 3 of 12) MER39|LTR|ERV1 94239 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr19-5441 chr19 24268213 24268423 + 6.95 0.000 Intergenic L1PA4|LINE|L1 -104871 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo chr5-6595 chr5 31763165 31763375 + 6.95 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 124139 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr5-5783 chr5 174228146 174228356 + 6.95 0.000 Intergenic MIRb|SINE|MIR -108103 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chrX-3824 chrX 148902394 148902604 + 6.95 0.000 intron (NM_001170628, intron 5 of 17) intron (NM_001170628, intron 5 of 17) 183408 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr18-3182 chr18 44535854 44536064 + 6.95 0.000 intron (NR_131768, intron 1 of 4) intron (NR_131768, intron 1 of 4) 4180 NR_131768 105667213 Hs.135737 NR_131768 LINC01601 - long intergenic non-protein coding RNA 1601 ncRNA chr19-2304 chr19 10231151 10231361 + 6.95 0.000 promoter-TSS (NM_004230) promoter-TSS (NM_004230) 75 NM_004230 9294 Hs.655405 NM_004230 ENSG00000267534 S1PR2 AGR16|DFNB68|EDG-5|EDG5|Gpcr13|H218|LPB2|S1P2 sphingosine-1-phosphate receptor 2 protein-coding chr20-3084 chr20 17913068 17913278 + 6.95 0.000 Intergenic L1MC4|LINE|L1 49773 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr1-13678 chr1 11991065 11991275 + 6.95 0.000 intron (NM_001127660, intron 2 of 17) intron (NM_001127660, intron 2 of 17) 10989 NM_001127660 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr17-7516 chr17 17376225 17376435 + 6.95 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 72957 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr13-3473 chr13 113413370 113413580 + 6.95 0.000 intron (NM_001304433, intron 1 of 1) intron (NM_001304433, intron 1 of 1) 918 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr4-4380 chr4 40870014 40870224 + 6.95 0.000 intron (NM_173075, intron 11 of 16) intron (NM_173075, intron 11 of 16) -12927 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr19-4672 chr19 17328084 17328294 + 6.95 0.000 exon (NM_020959, exon 13 of 18) exon (NM_020959, exon 13 of 18) 6666 NM_020959 57719 Hs.590990 NM_020959 ENSG00000074855 ANO8 KIAA1623|TMEM16H anoctamin 8 protein-coding chr4-6228 chr4 60945507 60945717 + 6.95 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR 22993 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr12-5424 chr12 122339108 122339318 + 6.95 0.000 intron (NM_198240, intron 9 of 23) intron (NM_198240, intron 9 of 23) -56329 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chrX-2317 chrX 55220891 55221101 + 6.95 0.000 intron (NM_130467, intron 1 of 4) intron (NM_130467, intron 1 of 4) 650 NM_001013435 90737 Hs.668491 NM_130467 ENSG00000158639 PAGE5 CT16|CT16.1|CT16.2|GAGEE1|PAGE-5 PAGE family member 5 protein-coding chr9-4501 chr9 38328336 38328546 + 6.95 0.000 Intergenic Intergenic -64261 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr1-13948 chr1 24172789 24172999 + 6.95 0.000 intron (NM_173065, intron 2 of 5) MLT1B|LTR|ERVL-MaLR 14395 NM_170743 163702 Hs.221375 NM_170743 ENSG00000185436 IFNLR1 CRF2/12|IFNLR|IL-28R1|IL28RA|LICR2 interferon lambda receptor 1 protein-coding chr4-3344 chr4 3053718 3053928 + 6.95 0.000 Intergenic AluSq2|SINE|Alu 20691 NR_045414 100750326 Hs.575112 NR_045414 HTT-AS HTT-AS1|HTTAS HTT antisense RNA ncRNA chr22-2684 chr22 37128012 37128222 + 6.95 0.000 exon (NM_000878, exon 10 of 10) exon (NM_000878, exon 10 of 10) -18404 NM_001289000 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr10-6848 chr10 25823282 25823492 + 6.95 0.000 Intergenic LTR88c|LTR|Gypsy? 110323 NR_120650 101929073 Hs.409816 NR_120650 ENSG00000226304 LOC101929073 - uncharacterized LOC101929073 ncRNA chr12-5808 chr12 24081534 24081744 + 6.95 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -130607 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr4-3414 chr4 58293909 58294119 + 6.95 0.000 Intergenic HERVH-int|LTR|ERV1 242314 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr2-14660 chr2 236020564 236020774 + 6.95 0.000 intron (NM_001037131, intron 13 of 17) MIRb|SINE|MIR 147717 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr11-8716 chr11 6703485 6703695 + 6.95 0.000 Intergenic Intergenic 18289 NR_003945 387751 Hs.494757 NR_003945 ENSG00000254838 GVINP1 GVIN1|GVIN1P|VLIG-1|VLIG1 GTPase, very large interferon inducible pseudogene 1 pseudo chr18-1881 chr18 27839260 27839470 + 6.95 0.000 Intergenic Intergenic 197276 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-8752 chr2 161786294 161786504 + 6.95 0.000 intron (NM_001354453, intron 2 of 24) L1PA17|LINE|L1 161983 NM_001354455 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr6-4687 chr6 54595761 54595971 + 6.95 0.000 Intergenic L2c|LINE|L2 -250905 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr9-6592 chr9 126207934 126208144 + 6.95 0.000 Intergenic Intergenic 67876 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr6-2631 chr6 154792190 154792400 + 6.95 0.000 intron (NM_014892, intron 4 of 19) intron (NM_014892, intron 4 of 19) 58917 NM_001286188 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr9-8085 chr9 98425477 98425687 + 6.95 0.000 intron (NM_005458, intron 7 of 18) intron (NM_005458, intron 7 of 18) -169933 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr11-4547 chr11 121641727 121641937 + 6.95 0.000 Intergenic HERVH-int|LTR|ERV1 189518 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr1-10862 chr1 205236536 205236746 + 6.95 0.000 intron (NM_001242925, intron 1 of 4) intron (NM_001242925, intron 1 of 4) 7710 NM_001242925 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr22-2866 chr22 45155155 45155365 + 6.95 0.000 intron (NR_038956, intron 1 of 2) intron (NR_038956, intron 1 of 2) -2676 NR_038957 100506714 Hs.189902 NR_038956 NUP50-DT NUP50-AS1 NUP50 divergent transcript ncRNA chrX-2715 chrX 121890115 121890325 + 6.95 0.000 Intergenic THE1A|LTR|ERVL-MaLR 519248 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr8-5880 chr8 15510910 15511120 + 6.95 0.000 Intergenic L1M5|LINE|L1 -29072 NM_178234 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr2-8065 chr2 73256343 73256553 + 6.95 0.000 3' UTR (NM_001080410, exon 17 of 17) 3' UTR (NM_001080410, exon 17 of 17) 22140 NM_006429 10574 Hs.368149 NM_006429 ENSG00000135624 CCT7 CCTETA|CCTH|NIP7-1|TCP1ETA chaperonin containing TCP1 subunit 7 protein-coding chr15-3904 chr15 25691321 25691531 + 6.95 0.000 intron (NM_024490, intron 15 of 20) intron (NM_024490, intron 15 of 20) 157399 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr9-5835 chr9 130105408 130105618 + 6.95 0.000 intron (NM_020960, intron 13 of 17) AluSq2|SINE|Alu 38706 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr3-5809 chr3 28799176 28799386 + 6.95 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 224003 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr6-6030 chr6 119076531 119076741 + 6.95 0.000 intron (NM_001288576, intron 1 of 15) intron (NM_001288576, intron 1 of 15) 2028 NM_024581 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr1-14851 chr1 77293383 77293593 + 6.95 0.000 intron (NM_012093, intron 2 of 13) MER58A|DNA|hAT-Charlie 10401 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr1-7880 chr1 111733620 111733830 + 6.95 0.000 intron (NM_198926, intron 1 of 1) intron (NM_198926, intron 1 of 1) 5670 NM_019099 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr7-3878 chr7 106736885 106737095 + 6.95 0.000 Intergenic MER50B|LTR|ERV1 -75832 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr2-12550 chr2 68177297 68177507 + 6.95 0.000 Intergenic Intergenic 19514 NM_020143 56902 Hs.262858 NM_020143 ENSG00000115946 PNO1 KHRBP1|RRP20 partner of NOB1 homolog protein-coding chr5-8866 chr5 153764382 153764592 + 6.95 0.000 exon (NM_001258022, exon 12 of 16) exon (NM_001258022, exon 12 of 16) 134500 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr1-16256 chr1 211636591 211636801 + 6.95 0.000 Intergenic Intergenic -3112 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr1-10435 chr1 159178330 159178540 + 6.95 0.000 intron (NM_001127173, intron 1 of 8) intron (NM_001127173, intron 1 of 8) 6820 NM_021189 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr22-3819 chr22 30952456 30952666 + 6.95 0.000 intron (NM_001303257, intron 3 of 25) intron (NM_001303257, intron 3 of 25) 15726 NM_001303257 22880 Hs.555918 NM_014941 ENSG00000133422 MORC2 CMT2Z|ZCW3|ZCWCC1 MORC family CW-type zinc finger 2 protein-coding chr9-7986 chr9 93245879 93246089 + 6.95 0.000 intron (NM_006648, intron 6 of 28) MLT1F1|LTR|ERVL-MaLR 61054 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr5-8614 chr5 139178265 139178475 + 6.95 0.000 intron (NM_022464, intron 1 of 9) intron (NM_022464, intron 1 of 9) 19998 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chrX-1866 chrX 119139775 119139985 + 6.95 0.000 intron (NM_020721, intron 2 of 13) intron (NM_020721, intron 2 of 13) 10699 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr1-15665 chr1 165773383 165773593 + 6.95 0.000 non-coding (NR_125374, exon 2 of 3) non-coding (NR_125374, exon 2 of 3) 4559 NR_125374 100147773 Hs.633824 NR_125374 TMCO1-AS1 - TMCO1 antisense RNA 1 ncRNA chr19-6060 chr19 2507188 2507398 + 6.95 0.000 Intergenic MIRc|SINE|MIR 31166 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr3-9023 chr3 21279699 21279909 + 6.95 0.000 Intergenic L1PA7|LINE|L1 -125922 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr7-9266 chr7 124140096 124140306 + 6.95 0.000 Intergenic L1MA1|LINE|L1 -107134 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr11-9160 chr11 34809796 34810006 + 6.95 0.000 Intergenic MER89|LTR|ERV1 -106229 NM_001166158 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding chr13-2980 chr13 77439395 77439605 + 6.95 0.000 Intergenic L1PA6|LINE|L1 -96174 NM_001160706 8796 Hs.534699 NM_003843 ENSG00000136155 SCEL - sciellin protein-coding KI270442.1-13 KI270442.1 71934 72144 + 6.95 0.000 NA NA NA NA chr6-8406 chr6 150654347 150654557 + 6.95 0.000 intron (NM_001029884, intron 2 of 16) intron (NM_001029884, intron 2 of 16) 21488 NR_138140 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chrX-2983 chrX 35510654 35510864 + 6.95 0.000 Intergenic MIR|SINE|MIR -287583 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr21-1844 chr21 41648503 41648713 + 6.95 0.000 Intergenic Intergenic -30694 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr7-3000 chr7 39260195 39260405 + 6.95 0.000 intron (NM_001370959, intron 4 of 9) (AC)n|Simple_repeat|Simple_repeat 68834 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr18-2733 chr18 73728775 73728985 + 6.95 0.000 Intergenic Intergenic 403939 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chrX-5462 chrX 154897168 154897378 + 6.95 0.000 intron (NM_000132, intron 21 of 25) intron (NM_000132, intron 21 of 25) -9815 NR_036260 100422977 NR_036260 ENSG00000221603 MIR1184-3 - microRNA 1184-3 ncRNA chr7-7819 chr7 3054291 3054501 + 6.95 0.000 Intergenic Intergenic -10529 NM_032415 84433 Hs.648101 NM_032415 ENSG00000198286 CARD11 BENTA|BIMP3|CARMA1|IMD11|IMD11A|PPBL caspase recruitment domain family member 11 protein-coding chr9-5414 chr9 95140705 95140915 + 6.95 0.000 intron (NM_001243744, intron 7 of 13) intron (NM_001243744, intron 7 of 13) -54716 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr14-2409 chr14 60328002 60328212 + 6.95 0.000 Intergenic CpG 4911 NR_146481 101927729 NR_146481 ENSG00000258556 LINC02322 - long intergenic non-protein coding RNA 2322 ncRNA chr6-5878 chr6 41092548 41092758 + 6.95 0.000 intron (NM_021705, intron 6 of 8) intron (NM_021705, intron 6 of 8) 5134 NM_001329690 221443 Hs.227457 NM_145063 ENSG00000124596 OARD1 C6orf130|TARG1|dJ34B21.3 O-acyl-ADP-ribose deacylase 1 protein-coding chr4-5638 chr4 7456149 7456359 + 6.95 0.000 intron (NM_020777, intron 2 of 26) MLT1B|LTR|ERVL-MaLR -3774 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr14-2329 chr14 101834761 101834971 + 6.95 0.000 intron (NM_001352916, intron 2 of 13) L4_C_Mam|LINE|RTE-X 25003 NM_001352912 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr15-2993 chr15 53969928 53970138 + 6.95 0.000 Intergenic L1MB2|LINE|L1 -8408 NM_001329919 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr20-3710 chr20 16265396 16265606 + 6.95 0.000 Intergenic Intergenic -279619 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr15-4657 chr15 64453827 64454037 + 6.95 0.000 intron (NM_001321924, intron 12 of 12) MIRc|SINE|MIR -45488 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr22-2293 chr22 36693520 36693730 + 6.95 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 9233 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr1-14557 chr1 52672968 52673178 + 6.95 0.000 Intergenic Intergenic 25274 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chr11-5898 chr11 12754754 12754964 + 6.95 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 80438 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr8-5977 chr8 21754133 21754343 + 6.95 0.000 intron (NM_001165039, intron 1 of 6) L2a|LINE|L2 34637 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr12-4805 chr12 55750857 55751067 + 6.95 0.000 3' UTR (NM_005811, exon 3 of 3) 3' UTR (NM_005811, exon 3 of 3) 7840 NM_005811 10220 Hs.600883 NM_005811 ENSG00000135414 GDF11 BMP-11|BMP11 growth differentiation factor 11 protein-coding chr20-4193 chr20 46055175 46055385 + 6.95 0.000 intron (NM_020708, intron 21 of 25) intron (NM_020708, intron 21 of 25) 26065 NM_020708 57468 Hs.21413 NM_020708 ENSG00000124140 SLC12A5 EIEE34|EIG14|KCC2|hKCC2 solute carrier family 12 member 5 protein-coding chr10-7815 chr10 42960616 42960826 + 6.95 0.000 Intergenic Intergenic 20786 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr3-9280 chr3 41939829 41940039 + 6.95 0.000 intron (NR_136342, intron 2 of 34) MER1B|DNA|hAT-Charlie 22169 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr3-5362 chr3 145926485 145926695 + 6.95 0.000 Intergenic Intergenic 142595 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr6-8119 chr6 127299576 127299786 + 6.95 0.000 intron (NM_001002030, intron 5 of 5) Tigger3b|DNA|TcMar-Tigger 32843 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr1-6597 chr1 37434337 37434547 + 6.95 0.000 Intergenic Intergenic 40001 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr2-5304 chr2 71748792 71749002 + 6.95 0.000 Intergenic Intergenic 282198 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr7-7974 chr7 13801114 13801324 + 6.95 0.000 Intergenic Intergenic 185295 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr11-10130 chr11 88849377 88849587 + 6.95 0.000 intron (NM_001143831, intron 2 of 8) intron (NM_001143831, intron 2 of 8) 198590 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr5-8280 chr5 113178822 113179032 + 6.95 0.000 intron (NM_001085377, intron 3 of 18) intron (NM_001085377, intron 3 of 18) 116011 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr4-6750 chr4 5667547 5667757 + 6.95 0.000 intron (NM_147127, intron 7 of 21) MER68|LTR|ERVL 40907 NM_147127 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr1-16719 chr1 247512865 247513075 + 6.95 0.000 intron (NM_001281838, intron 1 of 4) L1PA7|LINE|L1 -5482 NM_001281837 148823 Hs.732113 NM_145278 ENSG00000169224 GCSAML C1orf150 germinal center associated signaling and motility like protein-coding chr9-8338 chr9 115766214 115766424 + 6.95 0.000 Intergenic Intergenic -22080 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr15-3847 chr15 84531745 84531955 + 6.95 0.000 intron (NR_003661, intron 5 of 5) intron (NR_003661, intron 5 of 5) -15003 NR_003246 374650 Hs.454625 NM_198079 GOLGA6L5P GOLGA6L5|GOLGA6L8 golgin A6 family like 5, pseudogene pseudo chr14-2461 chr14 83008148 83008358 + 6.95 0.000 Intergenic AluSx1|SINE|Alu 365621 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr6-4951 chr6 102127474 102127684 + 6.95 0.000 Intergenic MSTB|LTR|ERVL-MaLR 728594 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr10-6957 chr10 66004920 66005130 + 6.95 0.000 intron (NM_001127384, intron 15 of 17) MLT1D|LTR|ERVL-MaLR 433600 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr5-7712 chr5 58262445 58262655 + 6.95 0.000 Intergenic Intergenic -140209 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr17-8305 chr17 70528402 70528612 + 6.95 0.000 Intergenic Intergenic 358972 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr10-8977 chr10 119410563 119410773 + 6.95 0.000 intron (NM_005308, intron 4 of 15) intron (NM_005308, intron 4 of 15) 32696 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr7-8097 chr7 25740043 25740253 + 6.95 0.000 intron (NR_157808, intron 1 of 4) intron (NR_157808, intron 1 of 4) 10884 NR_157814 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr22-3779 chr22 28930553 28930763 + 6.95 0.000 intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 13269 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr3-8819 chr3 7810979 7811189 + 6.95 0.000 Intergenic Intergenic 205223 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr13-2995 chr13 99918402 99918612 + 6.95 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) 38658 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr10-6869 chr10 30446038 30446248 + 6.95 0.000 intron (NM_001244134, intron 2 of 7) AluJr|SINE|Alu 11497 NM_001320961 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding chr7-5217 chr7 13560304 13560514 + 6.95 0.000 Intergenic Intergenic 426105 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr5-7404 chr5 25235030 25235240 + 6.95 0.000 intron (NR_136209, intron 1 of 3) intron (NR_136209, intron 1 of 3) 44182 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr17-6150 chr17 81854756 81854966 + 6.95 0.000 intron (NM_000918, intron 4 of 10) intron (NM_000918, intron 4 of 10) 5674 NM_000918 5034 Hs.464336 NM_000918 ENSG00000185624 P4HB CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB prolyl 4-hydroxylase subunit beta protein-coding chr10-4266 chr10 1020587 1020797 + 6.95 0.000 TTS (NM_012341) TTS (NM_012341) -1945 NR_027709 55853 Hs.728538 NM_018470 ENSG00000232656 IDI2-AS1 C10orf110|HT009|IDI2-AS IDI2 antisense RNA 1 ncRNA chr5-8304 chr5 115351477 115351687 + 6.95 0.000 Intergenic MER105|DNA|hAT-Charlie -54928 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr12-5200 chr12 105409894 105410104 + 6.95 0.000 Intergenic Intergenic 79308 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr1-16031 chr1 200923685 200923895 + 6.95 0.000 Intergenic Intergenic -5154 NR_147176 647215 Hs.576504 NR_147176 ENSG00000233217 MROH3P C1orf81 maestro heat like repeat family member 3, pseudogene pseudo chr22-3964 chr22 37917671 37917881 + 6.95 0.000 exon (NM_033386, exon 4 of 16) exon (NM_033386, exon 4 of 16) 11479 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr1-8234 chr1 29392555 29392765 + 6.95 0.000 Intergenic L2c|LINE|L2 -42546 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr1-16254 chr1 211597574 211597784 + 6.95 0.000 Intergenic AluY|SINE|Alu -18518 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr3-4049 chr3 75174131 75174341 + 6.95 0.000 Intergenic AluSx3|SINE|Alu -40240 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr11-7054 chr11 120059040 120059250 + 6.95 0.000 Intergenic Intergenic 69708 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr3-5912 chr3 41098255 41098465 + 6.95 0.000 Intergenic L2a|LINE|L2 -101145 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr20-3412 chr20 41734695 41734905 + 6.95 0.000 Intergenic Intergenic -116423 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr16-7111 chr16 89615055 89615265 + 6.95 0.000 intron (NM_001128141, intron 1 of 10) intron (NM_001128141, intron 1 of 10) 1852 NM_001128141 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr14-5020 chr14 78243996 78244206 + 6.95 0.000 intron (NR_073547, intron 2 of 20) intron (NR_073547, intron 2 of 20) 73728 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr7-8992 chr7 100455789 100455999 + 6.95 0.000 TTS (NM_001004323) TTS (NM_001004323) 8366 NM_001004323 402573 Hs.632306 NM_001004323 ENSG00000185955 C7orf61 - chromosome 7 open reading frame 61 protein-coding chr3-9020 chr3 21024840 21025050 + 6.95 0.000 Intergenic L2a|LINE|L2 -380781 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr18-2388 chr18 79858145 79858355 + 6.95 0.000 Intergenic AluSx1|SINE|Alu -5418 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr16-6519 chr16 62471591 62471801 + 6.95 0.000 Intergenic L1PREC2|LINE|L1 -435258 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr9-8111 chr9 99266082 99266292 + 6.95 0.000 Intergenic Intergenic 43905 NM_006808 10952 Hs.191887 NM_006808 ENSG00000106803 SEC61B - SEC61 translocon beta subunit protein-coding chr11-7196 chr11 131682724 131682934 + 6.95 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -19273 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr20-3149 chr20 37914333 37914543 + 6.95 0.000 intron (NM_080607, intron 1 of 3) (TG)n|Simple_repeat|Simple_repeat 11311 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr20-2118 chr20 33032768 33032978 + 6.95 0.000 intron (NM_174897, intron 1 of 14) L2c|LINE|L2 1225 NM_174897 128859 Hs.375090 NM_174897 ENSG00000167104 BPIFB6 BPIL3|LPLUNC6 BPI fold containing family B member 6 protein-coding chr11-8145 chr11 58003329 58003539 + 6.95 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -20447 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr1-9122 chr1 18077127 18077337 + 6.95 0.000 Intergenic Intergenic 11575 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr2-13947 chr2 185579478 185579688 + 6.95 0.000 Intergenic Intergenic 159136 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr7-7419 chr7 75546181 75546391 + 6.95 0.000 intron (NM_001243198, intron 23 of 28) Tigger19b|DNA|TcMar-Tigger -18163 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr7-6907 chr7 74121750 74121960 + 6.95 0.000 3' UTR (NM_002314, exon 16 of 16) 3' UTR (NM_002314, exon 16 of 16) 28638 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr2-6046 chr2 121248047 121248257 + 6.95 0.000 intron (NM_014553, intron 5 of 14) intron (NM_014553, intron 5 of 14) 37050 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr2-7003 chr2 143213465 143213675 + 6.95 0.000 intron (NM_018460, intron 3 of 13) intron (NM_018460, intron 3 of 13) 84151 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr10-8051 chr10 64574206 64574416 + 6.95 0.000 Intergenic Intergenic -251217 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr6-3512 chr6 34187978 34188188 + 6.95 0.000 Intergenic L1MEd|LINE|L1 -32461 NM_001256809 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr1-15036 chr1 93694070 93694280 + 6.95 0.000 intron (NM_001261408, intron 3 of 13) intron (NM_001261408, intron 3 of 13) -12338 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding KI270730.1-2 KI270730.1 95646 95856 + 6.95 0.000 NA NA NA NA chr8-4864 chr8 46889792 46890002 + 6.95 0.000 Intergenic BSR/Beta|Satellite|Satellite 49011 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chrX-4634 chrX 78152081 78152291 + 6.95 0.000 Intergenic L1PB1|LINE|L1 -12536 NM_015975 51616 Hs.592248 NM_015975 ENSG00000187325 TAF9B DN-7|DN7|TAF9L|TAFII31L|TFIID-31 TATA-box binding protein associated factor 9b protein-coding chr14-4999 chr14 76726549 76726759 + 6.95 0.000 Intergenic LTR1A2|LTR|ERV1 -34814 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr7-8306 chr7 40630901 40631111 + 6.95 0.000 intron (NM_001193312, intron 11 of 12) MIRb|SINE|MIR 348933 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr10-3135 chr10 58577382 58577592 + 6.95 0.000 intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 64615 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr12-8386 chr12 132818139 132818349 + 6.95 0.000 intron (NM_001172557, intron 2 of 15) intron (NM_001172557, intron 2 of 15) 10145 NM_005895 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr18-1808 chr18 13268378 13268588 + 6.95 0.000 intron (NM_181482, intron 1 of 5) intron (NM_181482, intron 1 of 5) -9622 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr16-4331 chr16 30549299 30549509 + 6.95 0.000 Intergenic Intergenic 8970 NM_033410 92595 Hs.132227 NM_033410 ENSG00000169951 ZNF764 - zinc finger protein 764 protein-coding chr17-6421 chr17 4049504 4049714 + 6.95 0.000 intron (NM_015113, intron 37 of 54) MIR|SINE|MIR 72506 NR_146884 105371496 Hs.579239 NR_146884 LINC01975 - long intergenic non-protein coding RNA 1975 ncRNA chr6-3782 chr6 18960429 18960639 + 6.95 0.000 Intergenic Intergenic 219946 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr1-11860 chr1 37381012 37381222 + 6.95 0.000 Intergenic L1PA6|LINE|L1 93326 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr20-3532 chr20 914490 914700 + 6.95 0.000 intron (NM_015985, intron 1 of 8) intron (NM_015985, intron 1 of 8) 1739 NM_015985 51378 Hs.278973 NM_015985 ENSG00000101280 ANGPT4 ANG3|ANG4 angiopoietin 4 protein-coding chr15-2334 chr15 99408076 99408286 + 6.95 0.000 Intergenic MIRb|SINE|MIR 150656 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr12-8345 chr12 131699300 131699510 + 6.95 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -11685 NM_001261411 6433 Hs.308171 NM_004592 ENSG00000061936 SFSWAP SFRS8|SWAP splicing factor SWAP protein-coding chr5-6980 chr5 148486007 148486217 + 6.95 0.000 intron (NM_001040173, intron 5 of 6) intron (NM_001040173, intron 5 of 6) 102154 NM_205836 81545 Hs.483772 NM_030793 ENSG00000145868 FBXO38 Fbx38|HMN2D|MOKA|SP329 F-box protein 38 protein-coding chr5-6048 chr5 175657838 175658048 + 6.95 0.000 promoter-TSS (NM_001367711) promoter-TSS (NM_001367711) -128 NR_160284 3274 Hs.247885 NM_022304 ENSG00000113749 HRH2 H2R|HH2R histamine receptor H2 protein-coding chr2-13377 chr2 137566288 137566498 + 6.95 0.000 intron (NM_001316349, intron 16 of 27) LTR45B|LTR|ERV1 361539 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr3-9258 chr3 39439417 39439627 + 6.95 0.000 Intergenic Intergenic -28158 NM_182935 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr3-10336 chr3 127305560 127305770 + 6.95 0.000 Intergenic Intergenic -17619 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr5-8859 chr5 153188391 153188601 + 6.95 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -216147 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr15-4149 chr15 88661519 88661729 + 6.95 0.000 Intergenic L1MEh|LINE|L1 22608 NM_001303236 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr12-5738 chr12 124953483 124953693 + 6.95 0.000 intron (NM_032656, intron 20 of 26) intron (NM_032656, intron 20 of 26) 35543 NM_032656 57647 Hs.107382 NM_032656 ENSG00000150990 DHX37 DDX37|Dhr1 DEAH-box helicase 37 protein-coding chr9-6772 chr9 25710206 25710416 + 6.95 0.000 Intergenic Intergenic -31453 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr10-6241 chr10 69093383 69093593 + 6.95 0.000 intron (NM_001321054, intron 1 of 1) intron (NM_001321054, intron 1 of 1) 5385 NM_002727 5552 Hs.1908 NM_002727 ENSG00000122862 SRGN PPG|PRG|PRG1 serglycin protein-coding chr5-5479 chr5 139824251 139824461 + 6.95 0.000 intron (NM_032289, intron 7 of 14) intron (NM_032289, intron 7 of 14) 28548 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr6-7968 chr6 113250509 113250719 + 6.95 0.000 Intergenic L1PA13|LINE|L1 182833 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr11-5964 chr11 17830113 17830323 + 6.95 0.000 intron (NR_104040, intron 11 of 11) L2c|LINE|L2 94270 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr11-7497 chr11 2824222 2824432 + 6.95 0.000 intron (NM_181798, intron 15 of 15) L2c|LINE|L2 37242 NR_130721 338653 Hs.639425 NR_130721 ENSG00000229414 KCNQ1-AS1 - KCNQ1 antisense RNA 1 ncRNA chr12-6120 chr12 128818665 128818875 + 6.95 0.000 intron (NM_145648, intron 1 of 7) L1MB7|LINE|L1 5188 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr18-1459 chr18 47445116 47445326 + 6.95 0.000 intron (NR_147192, intron 1 of 2) L2a|LINE|L2 64725 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr4-7680 chr4 87492965 87493175 + 6.95 0.000 intron (NM_004684, intron 4 of 10) intron (NM_004684, intron 4 of 10) 36433 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr12-8053 chr12 115683429 115683639 + 6.95 0.000 Intergenic Intergenic 465120 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr9-3473 chr9 6645220 6645430 + 6.95 0.000 exon (NM_000170, exon 1 of 25) exon (NM_000170, exon 1 of 25) 367 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr17-5146 chr17 8162704 8162914 + 6.95 0.000 promoter-TSS (NM_001330125) promoter-TSS (NM_001330125) 67 NM_001330125 6844 Hs.25348 NM_014232 ENSG00000220205 VAMP2 SYB2|VAMP-2 vesicle associated membrane protein 2 protein-coding chr8-5804 chr8 145039106 145039316 + 6.95 0.000 Intergenic MER70C|LTR|ERVL -13256 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding chr9-5489 chr9 101673866 101674076 + 6.95 0.000 intron (NM_133445, intron 2 of 8) L2c|LINE|L2 64609 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr3-8425 chr3 111042290 111042500 + 6.95 0.000 Intergenic L1MA4A|LINE|L1 27564 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr10-6818 chr10 16566151 16566361 + 6.95 0.000 Intergenic Intergenic -44377 NM_001010908 389941 Hs.676792 NM_001010908 ENSG00000165985 C1QL3 C1QTNF13|C1ql|CTRP13|K100 complement C1q like 3 protein-coding chr11-4983 chr11 71643059 71643269 + 6.95 0.000 Intergenic MER20|DNA|hAT-Charlie -60289 NM_001005405 440051 Hs.679617 NM_001005405 ENSG00000204571 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding chr7-5721 chr7 71162444 71162654 + 6.95 0.000 intron (NM_022479, intron 1 of 10) MER45A|DNA|hAT-Tip100 30405 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr9-6180 chr9 85886505 85886715 + 6.95 0.000 Intergenic Intergenic -54532 NM_001321881 60560 Hs.436098 NM_021929 ENSG00000135040 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding chr3-5639 chr3 10972311 10972521 + 6.95 0.000 Intergenic Intergenic -20318 NM_001348250 6529 Hs.443874 NM_003042 ENSG00000157103 SLC6A1 GABATHG|GABATR|GAT1|MAE solute carrier family 6 member 1 protein-coding chr6-2145 chr6 13762789 13762999 + 6.95 0.000 Intergenic Intergenic -51059 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr4-2427 chr4 129725778 129725988 + 6.95 0.000 intron (NR_110753, intron 4 of 4) intron (NR_110753, intron 4 of 4) 45595 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr1-10968 chr1 214187380 214187590 + 6.95 0.000 Intergenic CpG -93674 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr14-2006 chr14 55301747 55301957 + 6.95 0.000 intron (NM_152231, intron 1 of 1) intron (NM_152231, intron 1 of 1) 29698 NM_152231 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr11-6216 chr11 46554325 46554535 + 6.95 0.000 intron (NM_001267782, intron 1 of 19) intron (NM_001267782, intron 1 of 19) 33014 NR_160027 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr1-16165 chr1 206112330 206112540 + 6.95 0.000 intron (NM_000707, intron 1 of 1) MSTB|LTR|ERVL-MaLR 4953 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr12-6118 chr12 128784641 128784851 + 6.95 0.000 Intergenic MER96B|DNA|hAT-Tip100 39212 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr12-7597 chr12 78359505 78359715 + 6.95 0.000 non-coding (NR_135021, exon 1 of 2) non-coding (NR_135021, exon 1 of 2) 136 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr2-11048 chr2 112283645 112283855 + 6.95 0.000 intron (NM_198581, intron 1 of 11) MIRc|SINE|MIR 8153 NM_198581 376940 Hs.190477 NM_198581 ENSG00000188177 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding chr20-1710 chr20 38055505 38055715 + 6.95 0.000 intron (NM_021215, intron 3 of 6) Tigger6a|DNA|TcMar-Tigger 21864 NM_021215 58490 Hs.278839 NM_021215 ENSG00000101413 RPRD1B C20orf77|CREPT|K-H|Kub5-Hera|NET60|dJ1057B20.2 regulation of nuclear pre-mRNA domain containing 1B protein-coding chr4-2965 chr4 111143023 111143233 + 6.95 0.000 Intergenic HAL1|LINE|L1 -282481 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr12-2949 chr12 100964495 100964705 + 6.95 0.000 intron (NM_001286616, intron 4 of 26) intron (NM_001286616, intron 4 of 26) 62954 NM_001286616 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr5-7495 chr5 35044667 35044877 + 6.95 0.000 intron (NM_031900, intron 1 of 13) intron (NM_031900, intron 1 of 13) 3177 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr19-4634 chr19 14992112 14992322 + 6.95 0.000 intron (NR_073589, intron 1 of 8) MER96B|DNA|hAT-Tip100 -12353 NM_001272088 6511 Hs.515217 NM_005071 ENSG00000105143 SLC1A6 EAAT4 solute carrier family 1 member 6 protein-coding chr10-7080 chr10 90969855 90970065 + 6.95 0.000 intron (NR_131214, intron 3 of 5) MLT1K|LTR|ERVL-MaLR 22660 NR_131214 105378427 NR_131214 XLOC_008559 - uncharacterized LOC105378427 ncRNA chr2-14539 chr2 229968868 229969078 + 6.95 0.000 intron (NM_174899, intron 1 of 3) AluSz|SINE|Alu -45793 NM_001348335 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr11-8598 chr11 1480943 1481153 + 6.95 0.000 promoter-TSS (NM_053005) promoter-TSS (NM_053005) -162 NM_053005 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr17-6230 chr17 17984597 17984807 + 6.95 0.000 intron (NM_031294, intron 4 of 13) MIRb|SINE|MIR 11840 NM_001130091 83450 Hs.579264 NM_031294 ENSG00000171962 DRC3 CFAP134|LRRC48 dynein regulatory complex subunit 3 protein-coding chr9-7954 chr9 91316833 91317043 + 6.95 0.000 intron (NM_001306190, intron 3 of 8) L1ME3F|LINE|L1 44986 NM_001698 549 Hs.175905 NM_001698 ENSG00000148090 AUH - AU RNA binding methylglutaconyl-CoA hydratase protein-coding chr2-13669 chr2 162909829 162910039 + 6.95 0.000 Intergenic Intergenic -71167 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr4-8162 chr4 129290514 129290724 + 6.95 0.000 Intergenic L1PA7|LINE|L1 194467 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr11-9547 chr11 64527200 64527410 + 6.95 0.000 Intergenic L1M5|LINE|L1 -28636 NM_018484 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr9-8129 chr9 100727573 100727783 + 6.95 0.000 Intergenic L2b|LINE|L2 149599 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr17-8293 chr17 69175425 69175635 + 6.95 0.000 intron (NM_080282, intron 23 of 39) intron (NM_080282, intron 23 of 39) -33635 NM_080284 23460 Hs.709514 NM_080284 ENSG00000154262 ABCA6 EST155051 ATP binding cassette subfamily A member 6 protein-coding chr7-6628 chr7 115844289 115844499 + 6.95 0.000 Intergenic L2a|LINE|L2 123919 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr4-3267 chr4 105570602 105570812 + 6.95 0.000 TTS (NR_046840) TTS (NR_046840) 9116 NR_046840 100874374 Hs.668908 NR_046840 ENSG00000249885 ARHGEF38-IT1 - ARHGEF38 intronic transcript 1 ncRNA chr1-14103 chr1 30852120 30852330 + 6.95 0.000 Intergenic Intergenic 27573 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr22-3535 chr22 11580841 11581051 + 6.95 0.000 Intergenic AluSc8|SINE|Alu -316460 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr3-10781 chr3 158747309 158747519 + 6.95 0.000 Intergenic Intergenic -14928 NM_002888 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr8-2543 chr8 27969414 27969624 + 6.95 0.000 intron (NM_173833, intron 2 of 8) L1MC1|LINE|L1 23154 NM_173833 286133 Hs.591833 NM_173833 ENSG00000168079 SCARA5 NET33|Tesr scavenger receptor class A member 5 protein-coding chr7-9181 chr7 115409805 115410015 + 6.95 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 171531 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr14-3822 chr14 71533117 71533327 + 6.95 0.000 intron (NM_001354289, intron 5 of 23) intron (NM_001354289, intron 5 of 23) 45361 NR_027046 145474 Hs.658241 NR_027046 LOC145474 - uncharacterized LOC145474 ncRNA chr17-6685 chr17 77894767 77894977 + 6.95 0.000 Intergenic (AGCTC)n|Simple_repeat|Simple_repeat -10785 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr2-5557 chr2 166298001 166298211 + 6.95 0.000 intron (NR_110260, intron 10 of 11) L1M6|LINE|L1 77838 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr19-6447 chr19 16302131 16302341 + 6.95 0.000 Intergenic Intergenic -22590 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr8-1598 chr8 142634624 142634834 + 6.95 0.000 Intergenic Intergenic -3867 NR_134305 101928087 Hs.126101 NR_134305 ENSG00000277332 LOC101928087 - uncharacterized LOC101928087 ncRNA chr2-8365 chr2 110704995 110705205 + 6.95 0.000 Intergenic Intergenic -26993 NM_001278617 699 Hs.469649 NM_004336 ENSG00000169679 BUB1 BUB1A|BUB1L|hBUB1 BUB1 mitotic checkpoint serine/threonine kinase protein-coding chr17-7462 chr17 14833367 14833577 + 6.95 0.000 Intergenic Intergenic -181333 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr1-10408 chr1 157154893 157155103 + 6.95 0.000 Intergenic Intergenic -16407 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr17-6417 chr17 3490869 3491079 + 6.95 0.000 intron (NM_001128085, intron 5 of 6) L3|LINE|CR1 14977 NM_000049 443 Hs.171142 NM_000049 ENSG00000108381 ASPA ACY2|ASP aspartoacylase protein-coding chrX-5370 chrX 150328315 150328525 + 6.95 0.000 Intergenic Intergenic -34897 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr2-13475 chr2 146981929 146982139 + 6.95 0.000 Intergenic MER5A|DNA|hAT-Charlie 394977 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-6406 chr2 130008309 130008519 + 6.95 0.000 Intergenic Intergenic -27942 NR_036537 100131320 Hs.535586 NR_036537 ENSG00000225449 RAB6C-AS1 - RAB6C antisense RNA 1 ncRNA chr3-8022 chr3 190949799 190950009 + 6.95 0.000 Intergenic Intergenic 71974 NR_024343 100170222 Hs.717310 NR_024343 SNAR-I snaR-3 small NF90 (ILF3) associated RNA I snRNA chr11-9320 chr11 45926740 45926950 + 6.95 0.000 exon (NM_001300721, exon 10 of 14) exon (NM_001300721, exon 10 of 14) 4189 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr12-4859 chr12 59780969 59781179 + 6.95 0.000 non-coding (NR_073056, exon 7 of 7) non-coding (NR_073056, exon 7 of 7) 91704 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr8-6624 chr8 76806011 76806221 + 6.95 0.000 intron (NM_024721, intron 4 of 10) intron (NM_024721, intron 4 of 10) -122841 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA chr8-3774 chr8 24958918 24959128 + 6.95 0.000 Intergenic Intergenic -2154 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr2-10773 chr2 42469969 42470179 + 6.95 0.000 intron (NM_172344, intron 1 of 1) intron (NM_172344, intron 1 of 1) 23908 NM_133329 170850 Hs.352633 NM_133329 ENSG00000171126 KCNG3 KV10.1|KV6.3 potassium voltage-gated channel modifier subfamily G member 3 protein-coding chr7-6908 chr7 74363865 74364075 + 6.95 0.000 intron (NM_032421, intron 7 of 15) intron (NM_032421, intron 7 of 15) 74495 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr5-8361 chr5 121544096 121544306 + 6.95 0.000 Intergenic HERVL-int|LTR|ERVL 221651 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr8-3371 chr8 50169888 50170098 + 6.95 0.000 intron (NM_001321778, intron 1 of 16) intron (NM_001321778, intron 1 of 16) 5862 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr14-3661 chr14 86303731 86303941 + 6.95 0.000 Intergenic Intergenic 369158 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr17-7542 chr17 18159891 18160101 + 6.95 0.000 exon (NM_016239, exon 55 of 65) exon (NM_016239, exon 55 of 65) -23832 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr16-2146 chr16 31118784 31118994 + 6.95 0.000 intron (NM_032188, intron 1 of 10) AluJb|SINE|Alu 1225 NM_182958 84148 Hs.533803 NM_032188 ENSG00000103510 KAT8 MOF|MYST1|ZC2HC8|hMOF lysine acetyltransferase 8 protein-coding chr1-15558 chr1 158808691 158808901 + 6.95 0.000 Intergenic Intergenic -22555 NM_002432 4332 Hs.153837 NM_002432 ENSG00000163563 MNDA PYHIN3 myeloid cell nuclear differentiation antigen protein-coding chr12-8277 chr12 125497981 125498191 + 6.95 0.000 intron (NM_052907, intron 3 of 8) MLT1K|LTR|ERVL-MaLR -124366 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr16-2922 chr16 1950119 1950329 + 6.95 0.000 intron (NM_005061, intron 4 of 9) intron (NM_005061, intron 4 of 9) 4465 NM_005061 6123 Hs.657266 NM_005061 ENSG00000140986 RPL3L - ribosomal protein L3 like protein-coding chr18-3191 chr18 45684355 45684565 + 6.95 0.000 TTS (NM_001242692) TTS (NM_001242692) -39721 NM_001146036 6563 Hs.101307 NM_015865 ENSG00000141469 SLC14A1 HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE solute carrier family 14 member 1 (Kidd blood group) protein-coding chr11-5750 chr11 2726738 2726948 + 6.95 0.000 intron (NM_181798, intron 11 of 15) intron (NM_181798, intron 11 of 15) -26845 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr12-6504 chr12 106927139 106927349 + 6.95 0.000 Intergenic AluSx|SINE|Alu -28478 NM_001319666 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr1-15679 chr1 166976529 166976739 + 6.95 0.000 intron (NM_001286378, intron 1 of 12) L2c|LINE|L2 1052 NM_001286378 84944 Hs.651245 NM_032858 ENSG00000143194 MAEL CT128|SPATA35 maelstrom spermatogenic transposon silencer protein-coding chr4-8392 chr4 151061325 151061535 + 6.95 0.000 Intergenic AluSp|SINE|Alu -38143 NM_001267699 6189 Hs.356572 NM_001006 ENSG00000145425 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding chr4-7874 chr4 104495140 104495350 + 6.95 0.000 promoter-TSS (NR_132741) promoter-TSS (NR_132741) -351 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr1-11942 chr1 64137105 64137315 + 6.95 0.000 intron (NM_005012, intron 4 of 8) intron (NM_005012, intron 4 of 8) -23419 NR_110665 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA chr11-5927 chr11 14938772 14938982 + 6.95 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 33409 NM_001033952 796 Hs.37058 NM_001741 ENSG00000110680 CALCA CALC1|CGRP|CGRP-I|CGRP1|CT|KC|PCT calcitonin related polypeptide alpha protein-coding chr18-1625 chr18 49368925 49369135 + 6.95 0.000 intron (NM_001353210, intron 5 of 16) HAL1|LINE|L1 91615 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr7-9216 chr7 117612653 117612863 + 6.95 0.000 intron (NM_000492, intron 20 of 26) MLT1O|LTR|ERVL-MaLR -48082 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr5-3649 chr5 146732135 146732345 + 6.95 0.000 intron (NM_001271899, intron 2 of 9) intron (NM_001271899, intron 2 of 9) 146545 NM_001271948 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr6-8063 chr6 122666458 122666668 + 6.95 0.000 intron (NM_001270395, intron 1 of 4) intron (NM_001270395, intron 1 of 4) 13834 NM_001270395 5570 Hs.741340 NM_032471 ENSG00000135549 PKIB PRKACN2 cAMP-dependent protein kinase inhibitor beta protein-coding chr17-5560 chr17 44757766 44757976 + 6.95 0.000 Intergenic Intergenic -1117 NM_002390 4185 Hs.6088 NM_002390 ENSG00000073670 ADAM11 MDC ADAM metallopeptidase domain 11 protein-coding chr11-8423 chr11 104050051 104050261 + 6.95 0.000 intron (NM_025208, intron 1 of 6) L2a|LINE|L2 13516 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr14-5003 chr14 77118848 77119058 + 6.95 0.000 Intergenic Intergenic 20695 NM_033426 85457 Hs.709066 NM_033426 ENSG00000198894 CIPC KIAA1737 CLOCK interacting pacemaker protein-coding chr2-6059 chr2 132353469 132353679 + 6.95 0.000 non-coding (NR_135203, exon 1 of 1) non-coding (NR_135203, exon 1 of 1) 907 NR_135203 339742 Hs.98178 NR_135203 FAM201B - family with sequence similarity 201 member B ncRNA chr18-1732 chr18 5797647 5797857 + 6.95 0.000 Intergenic Intergenic -42943 NR_039772 100616244 NR_039772 ENSG00000272380 MIR3976 - microRNA 3976 ncRNA chr17-8049 chr17 50903875 50904085 + 6.95 0.000 Intergenic L1ME1|LINE|L1 -36002 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr3-4228 chr3 137014448 137014658 + 6.95 0.000 Intergenic Intergenic 56570 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr9-7566 chr9 35710944 35711154 + 6.95 0.000 promoter-TSS (NR_106911) promoter-TSS (NR_106911) -308 NR_106911 102465513 NR_106911 ENSG00000284195 MIR6852 hsa-mir-6852 microRNA 6852 ncRNA chr22-3857 chr22 32905967 32906177 + 6.95 0.000 intron (NM_003490, intron 4 of 13) intron (NM_003490, intron 4 of 13) 100749 NM_133633 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr5-6235 chr5 84507855 84508065 + 6.95 0.000 Intergenic Intergenic -123080 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr15-1662 chr15 24834513 24834723 + 6.95 0.000 intron (NM_001349459, intron 2 of 11) AluJr4|SINE|Alu 11010 NM_001349458 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr10-4132 chr10 76184904 76185114 + 6.95 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 402248 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr6-8150 chr6 130381118 130381328 + 6.95 0.000 intron (NM_001258276, intron 1 of 1) intron (NM_001258276, intron 1 of 1) 14942 NM_001258277 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr14-3001 chr14 53193301 53193511 + 6.95 0.000 Intergenic LTR8|LTR|ERV1 40052 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr1-11530 chr1 160162359 160162569 + 6.95 0.000 intron (NM_144699, intron 6 of 21) intron (NM_144699, intron 6 of 21) 10902 NM_144699 480 Hs.662219 NM_144699 ENSG00000132681 ATP1A4 ATP1A1|ATP1AL2 ATPase Na+/K+ transporting subunit alpha 4 protein-coding chr16-6418 chr16 56089443 56089653 + 6.95 0.000 Intergenic Intergenic 101546 NR_027078 283856 Hs.707433 NR_027078 ENSG00000246379 LOC283856 - uncharacterized LOC283856 ncRNA chr12-3263 chr12 67131675 67131885 + 6.95 0.000 Intergenic Intergenic -35496 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr5-6201 chr5 65020982 65021192 + 6.95 0.000 Intergenic (TTTTAA)n|Simple_repeat|Simple_repeat 252157 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr1-5478 chr1 112267534 112267744 + 6.95 0.000 Intergenic Intergenic -128575 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr5-7242 chr5 10533222 10533432 + 6.95 0.000 Intergenic Intergenic -11243 NR_134289 389273 Hs.519206 NR_134289 ENSG00000249160 LINC02213 - long intergenic non-protein coding RNA 2213 ncRNA chr10-2956 chr10 43065737 43065947 + 6.95 0.000 Intergenic Intergenic -11185 NM_020630 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr1-8237 chr1 30153122 30153332 + 6.95 0.000 Intergenic MSTA|LTR|ERVL-MaLR -115615 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr18-694 chr18 21459133 21459343 + 6.95 0.000 intron (NM_001142966, intron 15 of 32) intron (NM_001142966, intron 15 of 32) 141466 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding chr12-4950 chr12 71641522 71641732 + 6.95 0.000 intron (NM_144982, intron 6 of 34) intron (NM_144982, intron 6 of 34) 22221 NM_144982 196441 Hs.245798 NM_144982 ENSG00000133858 ZFC3H1 CCDC131|CSRC2|PSRC2 zinc finger C3H1-type containing protein-coding chr2-13053 chr2 109378632 109378842 + 6.95 0.000 intron (NM_001099289, intron 3 of 9) L1MEc|LINE|L1 -65112 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr20-3791 chr20 22403634 22403844 + 6.95 0.000 intron (NR_027090, intron 1 of 2) intron (NR_027090, intron 1 of 2) 16904 NR_027089 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr11-6117 chr11 37942272 37942482 + 6.95 0.000 intron (NR_135110, intron 1 of 2) L1PB4|LINE|L1 3776 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chrX-2146 chrX 34811001 34811211 + 6.95 0.000 Intergenic Intergenic -131690 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr16-4257 chr16 22986380 22986590 + 6.95 0.000 Intergenic AluSq|SINE|Alu 162785 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr2-11354 chr2 206561233 206561443 + 6.95 0.000 intron (NM_003812, intron 12 of 25) intron (NM_003812, intron 12 of 25) -82889 NM_001102659 200726 NM_001102659 ENSG00000235118 FAM237A - family with sequence similarity 237 member A protein-coding chr7-6612 chr7 104329125 104329335 + 6.95 0.000 intron (NM_199000, intron 1 of 2) CpG 574 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr3-7289 chr3 7579653 7579863 + 6.95 0.000 intron (NM_000844, intron 8 of 9) intron (NM_000844, intron 8 of 9) -44474 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr14-4616 chr14 52876581 52876791 + 6.95 0.000 intron (NM_006832, intron 7 of 14) intron (NM_006832, intron 7 of 14) 74364 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr14-4528 chr14 40037326 40037536 + 6.95 0.000 Intergenic PRIMA4-int|LTR|ERV1 -604931 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr17-5295 chr17 21664993 21665203 + 6.95 0.000 Intergenic L1MB2|LINE|L1 -27425 NM_001194958 100134444 Hs.200629 NM_001194958 ENSG00000260458 KCNJ18 KIR2.6|TTPP2 potassium voltage-gated channel subfamily J member 18 protein-coding chr6-4432 chr6 33874742 33874952 + 6.95 0.000 Intergenic Intergenic 22060 NR_038989 100507584 Hs.547104 NR_038989 ENSG00000249346 LINC01016 - long intergenic non-protein coding RNA 1016 ncRNA chr22-3803 chr22 30249255 30249465 + 6.95 0.000 Intergenic Intergenic -2601 NM_001257135 3976 Hs.2250 NM_002309 ENSG00000128342 LIF CDF|DIA|HILDA|MLPLI LIF interleukin 6 family cytokine protein-coding chr6-6925 chr6 14676409 14676619 + 6.95 0.000 Intergenic MIR3|SINE|MIR -391060 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA KI270757.1-4 KI270757.1 14659 14869 + 6.95 0.000 NA NA NA NA chr10-7955 chr10 55124709 55124919 + 6.95 0.000 intron (NM_001354404, intron 3 of 34) intron (NM_001354404, intron 3 of 34) -323523 NM_001142767 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding chr9-8127 chr9 100579752 100579962 + 6.95 0.000 intron (NM_001018116, intron 1 of 1) intron (NM_001018116, intron 1 of 1) 1778 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr4-4597 chr4 76637753 76637963 + 6.95 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 62307 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr11-10287 chr11 104994107 104994317 + 6.95 0.000 TTS (NR_024239) TTS (NR_024239) -25638 NM_001225 837 Hs.138378 NM_001225 ENSG00000196954 CASP4 ICE(rel)II|ICEREL-II|ICH-2|Mih1|Mih1/TX|TX caspase 4 protein-coding chr4-8195 chr4 134060024 134060234 + 6.95 0.000 Intergenic L1M1|LINE|L1 141660 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr9-6338 chr9 7718090 7718300 + 6.95 0.000 Intergenic L1PA6|LINE|L1 81583 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr12-5890 chr12 54996806 54997016 + 6.95 0.000 Intergenic Intergenic -12149 NM_001351149 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|ITPRID3|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr14-4375 chr14 26872949 26873159 + 6.95 0.000 promoter-TSS (NR_110041) promoter-TSS (NR_110041) -79 NR_110041 101927081 Hs.97955 NR_110041 ENSG00000257612 MIR4307HG - MIR4307 host gene ncRNA chr9-7808 chr9 80722106 80722316 + 6.95 0.000 Intergenic L3|LINE|CR1 747188 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr1-8598 chr1 183158558 183158768 + 6.95 0.000 Intergenic Intergenic -17393 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr14-5101 chr14 87905606 87905816 + 6.95 0.000 Intergenic LTR78B|LTR|ERV1 87471 NM_000153 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr17-5577 chr17 46962542 46962752 + 6.95 0.000 intron (NM_001321133, intron 6 of 6) MLT1H2|LTR|ERVL-MaLR -10370 NR_049812 100847067 NR_049812 ENSG00000264999 MIR5089 - microRNA 5089 ncRNA chr4-2094 chr4 40784952 40785162 + 6.95 0.000 intron (NM_024677, intron 7 of 11) AluJr|SINE|Alu 35102 NM_024677 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr3-4524 chr3 116770981 116771191 + 6.95 0.000 Intergenic Intergenic 61298 NR_015391 285194 Hs.120364 NR_015391 TUSC7 LINC00902|LSAMP-AS1|LSAMP-AS3|LSAMPAS3|NCRNA00295 tumor suppressor candidate 7 ncRNA chr20-3667 chr20 11902305 11902515 + 6.95 0.000 intron (NM_001282550, intron 1 of 4) Tigger2b_Pri|DNA|TcMar-Tigger 9917 NM_001282550 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr3-6727 chr3 137325334 137325544 + 6.95 0.000 Intergenic Intergenic 367456 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr5-5994 chr5 135743131 135743341 + 6.95 0.000 intron (NM_001349335, intron 3 of 10) AluSx1|SINE|Alu 59839 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr8-4948 chr8 116709152 116709362 + 6.95 0.000 intron (NM_003756, intron 2 of 7) intron (NM_003756, intron 2 of 7) 46566 NM_003756 8667 Hs.492599 NM_003756 ENSG00000147677 EIF3H EIF3S3|eIF3-gamma|eIF3-p40 eukaryotic translation initiation factor 3 subunit H protein-coding chr3-6350 chr3 83060676 83060886 + 6.95 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 1074639 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr3-11023 chr3 181692811 181693021 + 6.95 0.000 intron (NR_075090, intron 2 of 2) intron (NR_075090, intron 2 of 2) -19009 NM_003106 6657 Hs.518438 NM_003106 ENSG00000181449 SOX2 ANOP3|MCOPS3 SRY-box transcription factor 2 protein-coding chr22-2529 chr22 25049384 25049594 + 6.95 0.000 intron (NM_001145206, intron 4 of 10) intron (NM_001145206, intron 4 of 10) 21515 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding chr12-7674 chr12 85939370 85939580 + 6.95 0.000 Intergenic HERVL-int|LTR|ERVL 65180 NM_006183 4922 Hs.80962 NM_006183 ENSG00000133636 NTS NMN-125|NN|NT|NT/N|NTS1 neurotensin protein-coding chr7-5219 chr7 13834373 13834583 + 6.95 0.000 Intergenic Intergenic 152036 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr1-13787 chr1 18009614 18009824 + 6.95 0.000 Intergenic Intergenic -55938 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr1-10562 chr1 173258665 173258875 + 6.95 0.000 intron (NR_037845, intron 2 of 2) L1PA10|LINE|L1 -51439 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr9-5224 chr9 76216136 76216346 + 6.95 0.000 intron (NM_001190482, intron 20 of 36) intron (NM_001190482, intron 20 of 36) 178185 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr1-16655 chr1 241358047 241358257 + 6.95 0.000 promoter-TSS (NM_001282773) promoter-TSS (NM_001282773) -922 NM_001282773 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr8-5409 chr8 28093183 28093393 + 6.95 0.000 intron (NM_001284225, intron 1 of 12) CpG 149 NM_018091 55140 Hs.491336 NM_018091 ENSG00000134014 ELP3 KAT9 elongator acetyltransferase complex subunit 3 protein-coding chr7-8209 chr7 32031003 32031213 + 6.95 0.000 intron (NM_001322059, intron 3 of 17) LTR37A|LTR|ERV1 39299 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr1-8885 chr1 5409045 5409255 + 6.95 0.000 Intergenic THE1D|LTR|ERVL-MaLR 453591 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr5-6496 chr5 180967384 180967594 + 6.95 0.000 Intergenic Intergenic -21357 NM_197975 10917 Hs.225949 NM_006707 ENSG00000168903 BTNL3 BTN9.1|BTNLR butyrophilin like 3 protein-coding chr13-1689 chr13 77697713 77697923 + 6.95 0.000 TTS (NR_037438) TTS (NR_037438) 131 NM_001242868 122060 Hs.349955 NM_144595 ENSG00000139737 SLAIN1 C13orf32 SLAIN motif family member 1 protein-coding chr2-11624 chr2 4285469 4285679 + 6.95 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 311413 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr5-7776 chr5 62939034 62939244 + 6.95 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 360320 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chrX-3581 chrX 75514379 75514589 + 6.95 0.000 intron (NM_144969, intron 1 of 11) L1P2|LINE|L1 8553 NM_144969 158866 Hs.253211 NM_144969 ENSG00000102383 ZDHHC15 DHHC15|MRX91 zinc finger DHHC-type containing 15 protein-coding chr20-4174 chr20 44942308 44942518 + 6.95 0.000 3' UTR (NM_006809, exon 7 of 7) 3' UTR (NM_006809, exon 7 of 7) 10851 NR_134986 80336 Hs.641481 NM_001124756 ENSG00000101104 PABPC1L C20orf119|EPAB|PABPC1L1|dJ1069P2.3 poly(A) binding protein cytoplasmic 1 like protein-coding chr12-3689 chr12 414643 414853 + 6.95 0.000 intron (NM_001130148, intron 2 of 10) intron (NM_001130148, intron 2 of 10) 13104 NM_032358 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr6-4858 chr6 87701268 87701478 + 6.95 0.000 intron (NM_018064, intron 1 of 4) intron (NM_018064, intron 1 of 4) 860 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr1-7895 chr1 147541383 147541593 + 6.95 0.000 promoter-TSS (NM_004326) promoter-TSS (NM_004326) -13 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS BCL9 transcription coactivator protein-coding chr3-5159 chr3 59407028 59407238 + 6.95 0.000 Intergenic Intergenic 251364 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr2-11480 chr2 232639485 232639695 + 6.95 0.000 intron (NM_001308395, intron 2 of 4) intron (NM_001308395, intron 2 of 4) 5986 NM_025202 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr16-4598 chr16 68409346 68409556 + 6.95 0.000 intron (NM_018667, intron 1 of 8) MIRb|SINE|MIR 39057 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr3-10728 chr3 155154372 155154582 + 6.95 0.000 intron (NM_000902, intron 16 of 22) MIR3|SINE|MIR 74466 NM_007289 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr2-10843 chr2 58527837 58528047 + 6.95 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 7189 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr16-2776 chr16 25964117 25964327 + 6.95 0.000 intron (NM_006040, intron 1 of 1) L1PA16|LINE|L1 -61015 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr14-2659 chr14 71005510 71005720 + 6.95 0.000 intron (NM_014982, intron 8 of 35) intron (NM_014982, intron 8 of 35) 98156 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr21-1069 chr21 31562127 31562337 + 6.95 0.000 Intergenic Intergenic 2999 NM_001321023 150051 Hs.708976 NM_001321023 LOC150051 - uncharacterized LOC150051 protein-coding chr10-6732 chr10 127911510 127911720 + 6.95 0.000 intron (NM_001323356, intron 1 of 19) intron (NM_001323356, intron 1 of 19) 4512 NM_001316676 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr14-3922 chr14 102645804 102646014 + 6.95 0.000 intron (NM_015156, intron 2 of 11) MLT1G1|LTR|ERVL-MaLR 53260 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr22-1181 chr22 42770065 42770275 + 6.95 0.000 Intergenic CpG -48869 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr2-9559 chr2 240209477 240209687 + 6.95 0.000 Intergenic Intergenic -68924 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr1-16344 chr1 218546350 218546560 + 6.95 0.000 intron (NR_031644, intron 2 of 6) MER91B|DNA|hAT-Tip100 36360 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr7-6057 chr7 112548047 112548257 + 6.95 0.000 Intergenic AluJr|SINE|Alu 67161 NM_182597 286006 Hs.396189 NM_182597 ENSG00000181016 LSMEM1 C7orf53 leucine rich single-pass membrane protein 1 protein-coding chr11-9376 chr11 50221572 50221782 + 6.95 0.000 Intergenic AluSz|SINE|Alu 76785 NR_003034 441601 Hs.144683 NR_003034 ENSG00000255042 LOC441601 - septin 7 pseudogene pseudo chr14-1686 chr14 83972864 83973074 + 6.95 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -1298963 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr7-6814 chr7 33478835 33479045 + 6.95 0.000 intron (NM_001348037, intron 18 of 20) intron (NM_001348037, intron 18 of 20) 349376 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr1-12623 chr1 38547618 38547828 + 6.95 0.000 Intergenic Intergenic 72527 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr3-5056 chr3 40569010 40569220 + 6.95 0.000 Intergenic LTR8B|LTR|ERV1 44155 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr10-8296 chr10 77461698 77461908 + 6.95 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 110931 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr3-2638 chr3 9703830 9704040 + 6.95 0.000 5' UTR (NM_153635, exon 1 of 20) 5' UTR (NM_153635, exon 1 of 20) 102 NM_001308388 151835 Hs.121335 NM_153635 ENSG00000144550 CPNE9 - copine family member 9 protein-coding chr7-7757 chr7 1352888 1353098 + 6.95 0.000 Intergenic Intergenic 106477 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr1-8504 chr1 153217722 153217932 + 6.95 0.000 intron (NM_001195571, intron 1 of 1) intron (NM_001195571, intron 1 of 1) 243 NM_001195571 574414 Hs.135098 NM_001195571 ENSG00000203783 PRR9 - proline rich 9 protein-coding chr13-1787 chr13 21458499 21458709 + 6.95 0.000 intron (NR_104486, intron 1 of 14) intron (NR_104486, intron 1 of 14) 699 NM_001330059 253832 Hs.564611 NM_153251 ENSG00000180776 ZDHHC20 4933421L13Rik|DHHC-20|DHHC20 zinc finger DHHC-type containing 20 protein-coding chr12-5355 chr12 117621701 117621911 + 6.95 0.000 intron (NM_173598, intron 5 of 19) intron (NM_173598, intron 5 of 19) -260004 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr12-8019 chr12 112971303 112971513 + 6.95 0.000 3' UTR (NM_006187, exon 16 of 16) 3' UTR (NM_006187, exon 16 of 16) -7111 NM_001032731 4939 Hs.414332 NM_002535 ENSG00000111335 OAS2 - 2'-5'-oligoadenylate synthetase 2 protein-coding chr3-8569 chr3 153431431 153431641 + 6.95 0.000 intron (NR_146713, intron 5 of 6) MIRb|SINE|MIR -52959 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr1-8985 chr1 10310364 10310574 + 6.95 0.000 intron (NM_001365951, intron 22 of 48) MER58A|DNA|hAT-Charlie 11503 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr1-14738 chr1 67144887 67145097 + 6.95 0.000 Intergenic L2b|LINE|L2 -10022 NM_001276352 400757 Hs.666621 NM_001013674 ENSG00000203963 C1orf141 - chromosome 1 open reading frame 141 protein-coding chr11-9932 chr11 76072061 76072271 + 6.95 0.000 intron (NM_003369, intron 13 of 14) L2a|LINE|L2 134336 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr10-4333 chr10 27865321 27865531 + 6.95 0.000 intron (NM_001290021, intron 10 of 13) L2b|LINE|L2 116445 NM_001290021 55130 Hs.127530 NM_018076 ENSG00000169126 ARMC4 CILD23 armadillo repeat containing 4 protein-coding chr22-3530 chr22 11324539 11324749 + 6.95 0.000 Intergenic LTR5_Hs|LTR|ERVK -363115 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr4-7511 chr4 74689318 74689528 + 6.95 0.000 Intergenic MIR|SINE|MIR 105100 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr2-9708 chr2 56199582 56199792 + 6.95 0.000 intron (NM_001348516, intron 2 of 2) Tigger15a|DNA|TcMar-Tigger -13917 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr6-2944 chr6 34154656 34154866 + 6.95 0.000 intron (NM_001256809, intron 1 of 8) CpG 861 NM_001256809 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr6-7192 chr6 38978731 38978941 + 6.95 0.000 intron (NM_001371, intron 84 of 91) intron (NM_001371, intron 84 of 91) -25729 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr1-14997 chr1 91457871 91458081 + 6.95 0.000 Intergenic Intergenic -42871 NM_001134419 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr10-6370 chr10 132928391 132928601 + 6.95 0.000 intron (NM_001200049, intron 9 of 57) intron (NM_001200049, intron 9 of 57) 14074 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr6-7948 chr6 111467400 111467610 + 6.95 0.000 intron (NM_001286431, intron 3 of 34) intron (NM_001286431, intron 3 of 34) -15967 NR_034110 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr14-3965 chr14 23582793 23583003 + 6.95 0.000 Intergenic Intergenic -4108 NM_032452 84502 Hs.597841 NM_032452 ENSG00000092051 JPH4 JP4|JPHL1 junctophilin 4 protein-coding chrX-3723 chrX 118589054 118589264 + 6.95 0.000 intron (NM_144658, intron 18 of 52) intron (NM_144658, intron 18 of 52) 93250 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr2-8143 chr2 82461299 82461509 + 6.95 0.000 Intergenic ERVL-B4-int|LTR|ERVL -395399 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chrX-4896 chrX 107441249 107441459 + 6.95 0.000 Intergenic Intergenic -81096 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr12-6692 chr12 3950079 3950289 + 6.95 0.000 Intergenic Intergenic -76736 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr12-6156 chr12 6358583 6358793 + 6.95 0.000 intron (NM_001038, intron 4 of 12) AluJo|SINE|Alu -16472 NM_001270987 4055 Hs.1116 NM_002342 ENSG00000111321 LTBR D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3 lymphotoxin beta receptor protein-coding chrX-2295 chrX 53093227 53093437 + 6.95 0.000 promoter-TSS (NR_145976) promoter-TSS (NR_145976) -825 NR_110456 102723508 Hs.633244 NR_110456 KANTR LINC01155|Spasm KDM5C adjacent transcript ncRNA chr5-7185 chr5 6230717 6230927 + 6.95 0.000 Intergenic Intergenic 106470 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr2-4821 chr2 60385612 60385822 + 6.95 0.000 intron (NR_132992, intron 1 of 1) intron (NR_132992, intron 1 of 1) 1728 NR_039631 100616473 NR_039631 ENSG00000266078 MIR4432 - microRNA 4432 ncRNA chr7-9159 chr7 112674589 112674799 + 6.95 0.000 intron (NR_110158, intron 5 of 7) MSTC|LTR|ERVL-MaLR 52313 NR_110158 101928012 Hs.521131 NR_110158 ENSG00000223646 LOC101928012 - uncharacterized LOC101928012 ncRNA chr14-3502 chr14 102947778 102947988 + 6.95 0.000 intron (NM_006035, intron 26 of 36) (GCCCT)n|Simple_repeat|Simple_repeat 25227 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr2-12045 chr2 30137541 30137751 + 6.95 0.000 Intergenic Intergenic -9361 NM_016061 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr10-4374 chr10 38228434 38228644 + 6.95 0.000 Intergenic AluSz6|SINE|Alu 52868 NR_024524 100129055 Hs.148265 NR_024524 LOC100129055 - cyclin Y like 1 pseudogene pseudo chr10-7311 chr10 132811345 132811555 + 6.95 0.000 intron (NM_001200049, intron 55 of 57) intron (NM_001200049, intron 55 of 57) -25303 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr9-3716 chr9 112892211 112892421 + 6.95 0.000 Intergenic Intergenic -1440 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr8-1527 chr8 90985256 90985466 + 6.95 0.000 promoter-TSS (NM_001190972) promoter-TSS (NM_001190972) -123 NM_001190972 100127983 Hs.733266 NM_001190972 ENSG00000253250 C8orf88 - chromosome 8 open reading frame 88 protein-coding chr6-3697 chr6 164494510 164494720 + 6.95 0.000 Intergenic L2a|LINE|L2 327448 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr6-6993 chr6 20277526 20277736 + 6.95 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -65162 NR_073465 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr10-7555 chr10 15744400 15744610 + 6.95 0.000 Intergenic Intergenic -24170 NM_001291494 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chrX-3755 chrX 128304562 128304772 + 6.95 0.000 Intergenic L1PA17|LINE|L1 -252264 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr12-8135 chr12 120557238 120557448 + 6.95 0.000 exon (NM_001330474, exon 5 of 17) exon (NM_001330474, exon 5 of 17) 22987 NM_001330474 9921 Hs.442798 NM_014868 ENSG00000022840 RNF10 RIE2 ring finger protein 10 protein-coding chr6-7586 chr6 74147406 74147616 + 6.95 0.000 intron (NR_110856, intron 1 of 3) HERVL-int|LTR|ERVL 78060 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr2-8197 chr2 88815848 88816058 + 6.95 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 3583 NR_039635 100616399 NR_039635 ENSG00000265510 MIR4436A mir-4436a microRNA 4436a ncRNA chr15-3809 chr15 73124873 73125083 + 6.95 0.000 intron (NM_002499, intron 3 of 28) intron (NM_002499, intron 3 of 28) 72494 NM_001172624 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr19-6640 chr19 32744595 32744805 + 6.95 0.000 intron (NM_001366102, intron 4 of 32) intron (NM_001366102, intron 4 of 32) 24933 NM_001366102 91646 Hs.646351 NM_001015890 ENSG00000173809 TDRD12 ECAT8 tudor domain containing 12 protein-coding chr7-7375 chr7 66094029 66094239 + 6.95 0.000 TTS (NM_001024944) TTS (NM_001024944) 18315 NM_001024943 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr17-7330 chr17 5795016 5795226 + 6.95 0.000 intron (NR_040000, intron 1 of 3) intron (NR_040000, intron 1 of 3) 22887 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr4-4414 chr4 46197113 46197323 + 6.95 0.000 Intergenic Intergenic -73164 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr3-5964 chr3 46713426 46713636 + 6.95 0.000 intron (NM_013270, intron 4 of 5) intron (NM_013270, intron 4 of 5) 4338 NM_013270 29122 Hs.120365 NM_013270 ENSG00000283706 PRSS50 CT20|TSP50 serine protease 50 protein-coding chr7-7078 chr7 151729835 151730045 + 6.95 0.000 intron (NM_016203, intron 3 of 15) L1MB3|LINE|L1 6323 NM_001363698 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr4-6910 chr4 15245406 15245616 + 6.95 0.000 intron (NR_125911, intron 2 of 5) LTR16B2|LTR|ERVL -94477 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr6-6597 chr6 144645679 144645889 + 6.95 0.000 intron (NM_007124, intron 50 of 73) intron (NM_007124, intron 50 of 73) 240129 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr3-8862 chr3 9977024 9977234 + 6.95 0.000 intron (NM_018447, intron 3 of 8) intron (NM_018447, intron 3 of 8) -9764 NR_103821 442075 Hs.690469 NM_001013730 EMC3-AS1 - EMC3 antisense RNA 1 ncRNA chr5-3630 chr5 137837500 137837710 + 6.95 0.000 Intergenic Intergenic -30251 NM_006790 9499 Hs.84665 NM_006790 ENSG00000120729 MYOT LGMD1|LGMD1A|MFM3|TTID|TTOD myotilin protein-coding chr1-12001 chr1 92945269 92945479 + 6.95 0.000 intron (NM_001006605, intron 1 of 4) intron (NM_001006605, intron 1 of 4) 16088 NM_001006605 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr6-5088 chr6 118581913 118582123 + 6.95 0.000 intron (NM_001042475, intron 2 of 12) HUERS-P3-int|LTR|ERV1 33722 NM_002667 5350 Hs.170839 NM_002667 ENSG00000198523 PLN CMD1P|CMH18|PLB phospholamban protein-coding chr19-5668 chr19 8054324 8054534 + 6.95 0.000 intron (NM_005624, intron 2 of 5) intron (NM_005624, intron 2 of 5) 1667 NM_005624 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr5-6330 chr5 133909787 133909997 + 6.95 0.000 Intergenic Intergenic -3785 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr3-10908 chr3 171757574 171757784 + 6.95 0.000 intron (NM_002662, intron 1 of 26) intron (NM_002662, intron 1 of 26) 52804 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr2-13784 chr2 172224897 172225107 + 6.95 0.000 Intergenic AluJb|SINE|Alu 121996 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr7-4407 chr7 100088912 100089122 + 6.95 0.000 promoter-TSS (NM_006833) promoter-TSS (NM_006833) 48 NM_006833 10980 Hs.15591 NM_006833 ENSG00000168090 COPS6 CSN6|MOV34-34KD COP9 signalosome subunit 6 protein-coding chrX-3235 chrX 67426578 67426788 + 6.95 0.000 Intergenic L1PA7|LINE|L1 -117338 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr7-6772 chr7 18196732 18196942 + 6.95 0.000 intron (NM_001321872, intron 2 of 11) intron (NM_001321872, intron 2 of 11) -69528 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr12-7315 chr12 54261920 54262130 + 6.95 0.000 promoter-TSS (NR_157844) promoter-TSS (NR_157844) -590 NR_157844 112935960 NR_157844 SCAT2 CBX5-AS1 S-phase cancer associated transcript 2 ncRNA chr20-3682 chr20 13366386 13366596 + 6.95 0.000 Intergenic Intergenic -126804 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr18-1791 chr18 11821162 11821372 + 6.95 0.000 intron (NM_001369387, intron 4 of 11) intron (NM_001369387, intron 4 of 11) -30146 NM_020412 57132 Hs.656244 NM_020412 ENSG00000255112 CHMP1B C10orf2|C18-ORF2|C18orf2|CHMP1.5|Vps46-2|Vps46B|hVps46-2 charged multivesicular body protein 1B protein-coding chr1-13993 chr1 25755234 25755444 + 6.95 0.000 intron (NM_020379, intron 5 of 11) intron (NM_020379, intron 5 of 11) -44854 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr11-3462 chr11 69750983 69751193 + 6.95 0.000 Intergenic L2b|LINE|L2 24253 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr5-9121 chr5 174311979 174312189 + 6.95 0.000 Intergenic CpG -24270 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr13-3732 chr13 40912150 40912360 + 6.95 0.000 non-coding (NR_003365, exon 3 of 3) non-coding (NR_003365, exon 3 of 3) 9495 NR_038258 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo chr8-3826 chr8 29559996 29560206 + 6.95 0.000 Intergenic Intergenic 188008 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA chr6-8331 chr6 146653738 146653948 + 6.95 0.000 intron (NM_024694, intron 3 of 35) intron (NM_024694, intron 3 of 35) 54871 NM_024694 79747 Hs.720870 NM_024694 ENSG00000118492 ADGB C6orf103|CAPN16 androglobin protein-coding chr22-2495 chr22 22165040 22165250 + 6.95 0.000 Intergenic Intergenic -79641 NM_001303509 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr4-7531 chr4 75780151 75780361 + 6.95 0.000 intron (NM_003715, intron 8 of 23) Tigger1|DNA|TcMar-Tigger 55734 NM_003715 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr6-8151 chr6 130632398 130632608 + 6.95 0.000 Intergenic Intergenic -194902 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr7-6068 chr7 114168554 114168764 + 6.95 0.000 intron (NR_033766, intron 1 of 19) THE1B-int|LTR|ERVL-MaLR 82332 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr1-13554 chr1 7325055 7325265 + 6.95 0.000 intron (NM_001349608, intron 4 of 21) L2a|LINE|L2 64594 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr10-6368 chr10 132558791 132559001 + 6.95 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 21109 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr9-7793 chr9 79705858 79706068 + 6.95 0.000 intron (NM_001351563, intron 9 of 17) intron (NM_001351563, intron 9 of 17) -118567 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr22-3327 chr22 21761228 21761438 + 6.95 0.000 3' UTR (NM_002745, exon 9 of 9) 3' UTR (NM_002745, exon 9 of 9) -25539 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr11-8949 chr11 19072964 19073174 + 6.95 0.000 Intergenic Intergenic -12352 NM_054030 117194 Hs.350566 NM_054030 ENSG00000183695 MRGPRX2 MGRG3|MRGX2 MAS related GPR family member X2 protein-coding chr9-8091 chr9 98481059 98481269 + 6.95 0.000 intron (NM_005458, intron 4 of 18) intron (NM_005458, intron 4 of 18) -225515 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chrX-1156 chrX 44130296 44130506 + 6.95 0.000 Intergenic L1MD1|LINE|L1 -157011 NM_000266 4693 Hs.522615 NM_000266 ENSG00000124479 NDP EVR2|FEVR|ND norrin cystine knot growth factor NDP protein-coding chr2-8678 chr2 149776868 149777078 + 6.95 0.000 intron (NR_145421, intron 3 of 4) intron (NR_145421, intron 3 of 4) 82218 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr10-8037 chr10 63539860 63540070 + 6.95 0.000 intron (NM_001001330, intron 1 of 7) intron (NM_001001330, intron 1 of 7) -18075 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr17-2691 chr17 50273047 50273257 + 6.95 0.000 intron (NM_001168215, intron 1 of 5) intron (NM_001168215, intron 1 of 5) -1314 NM_153229 162461 Hs.224630 NM_153229 ENSG00000167105 TMEM92 - transmembrane protein 92 protein-coding chr22-3843 chr22 32327675 32327885 + 6.95 0.000 Intergenic Intergenic -27105 NM_006604 10738 Hs.558455 NM_006604 ENSG00000128276 RFPL3 RNF120 ret finger protein like 3 protein-coding chr6-5105 chr6 119849374 119849584 + 6.95 0.000 Intergenic L3|LINE|CR1 -165700 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr19-2942 chr19 4669814 4670024 + 6.95 0.000 intron (NM_019107, intron 1 of 5) CpG 484 NM_019107 56005 Hs.465645 NM_019107 ENSG00000074842 MYDGF C19orf10|EUROIMAGE1875335|IL25|IL27|IL27w|R33729_1|SF20 myeloid derived growth factor protein-coding chr4-3828 chr4 121822933 121823143 + 6.95 0.000 intron (NM_001237, intron 1 of 7) intron (NM_001237, intron 1 of 7) 845 NM_001237 890 Hs.58974 NM_001237 ENSG00000145386 CCNA2 CCN1|CCNA cyclin A2 protein-coding chr20-4009 chr20 36346818 36347028 + 6.95 0.000 intron (NM_001365621, intron 1 of 12) intron (NM_001365621, intron 1 of 12) 40584 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr4-6880 chr4 12453414 12453624 + 6.95 0.000 Intergenic MSTB|LTR|ERVL-MaLR 230068 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr13-3314 chr13 53619917 53620127 + 6.95 0.000 Intergenic L1PA5|LINE|L1 -195397 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chrX-1567 chrX 51743640 51743850 + 6.95 0.000 exon (NM_018094, exon 1 of 1) exon (NM_018094, exon 1 of 1) 303 NM_018094 23708 Hs.59523 NM_018094 ENSG00000189369 GSPT2 ERF3B|GST2 G1 to S phase transition 2 protein-coding chr10-3464 chr10 58776394 58776604 + 6.95 0.000 intron (NM_001080512, intron 3 of 20) intron (NM_001080512, intron 3 of 20) 61484 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr3-10629 chr3 147089347 147089557 + 6.95 0.000 Intergenic Intergenic 167529 NR_135560 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr16-2375 chr16 65548414 65548624 + 6.95 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 27781 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr7-6554 chr7 51475196 51475406 + 6.95 0.000 Intergenic MIRb|SINE|MIR -82045 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr11-7379 chr11 75406877 75407087 + 6.95 0.000 TTS (NM_001260506) TTS (NM_001260506) 2561 NR_000025 114599 Hs.689080 NR_000025 ENSG00000207445 SNORD15B RNU15B|U15B small nucleolar RNA, C/D box 15B snoRNA chr6-6869 chr6 10398615 10398825 + 6.95 0.000 intron (NM_001042425, intron 6 of 6) intron (NM_001042425, intron 6 of 6) -5782 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr4-7377 chr4 60922859 60923069 + 6.95 0.000 TTS (NR_039652) TTS (NR_039652) 345 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr6-7280 chr6 43335748 43335958 + 6.95 0.000 TTS (NM_014345) TTS (NM_014345) -27027 NM_001366068 401262 Hs.653165 NM_206922 ENSG00000146215 CRIP3 CRP-3|TLP|TLP-A|h6LIMo cysteine rich protein 3 protein-coding chr10-7636 chr10 24297970 24298180 + 6.95 0.000 intron (NM_019590, intron 2 of 20) MER20B|DNA|hAT-Charlie 22390 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr3-4952 chr3 10484899 10485109 + 6.95 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) 20580 NM_001363862 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr1-4834 chr1 25919478 25919688 + 6.95 0.000 Intergenic AluSz6|SINE|Alu -12706 NM_203399 3925 Hs.209983 NM_005563 ENSG00000117632 STMN1 C1orf215|LAP18|Lag|OP18|PP17|PP19|PR22|SMN stathmin 1 protein-coding chr3-10330 chr3 127045137 127045347 + 6.95 0.000 Intergenic Intergenic 56648 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr3-7627 chr3 23315465 23315675 + 6.95 0.000 intron (NM_001370225, intron 3 of 5) L1M1|LINE|L1 112243 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr1-8333 chr1 53710820 53711030 + 6.95 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 23279 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr7-7534 chr7 108146166 108146376 + 6.95 0.000 Intergenic Intergenic -15910 NM_007356 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr2-9711 chr2 58131723 58131933 + 6.95 0.000 exon (NM_001288839, exon 8 of 12) exon (NM_001288839, exon 8 of 12) 85116 NM_001130481 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr4-7805 chr4 98540742 98540952 + 6.95 0.000 intron (NM_005723, intron 1 of 7) Plat_L3|LINE|CR1 117764 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr19-4862 chr19 39248637 39248847 + 6.95 0.000 non-coding (NR_074079, exon 1 of 5) non-coding (NR_074079, exon 1 of 5) 114 NR_074079 101180976 Hs.745579 NM_001276254 ENSG00000272395 IFNL4 IFNAN interferon lambda 4 (gene/pseudogene) protein-coding chr3-9229 chr3 38080311 38080521 + 6.95 0.000 intron (NM_007335, intron 6 of 36) HERVH-int|LTR|ERV1 41208 NM_001321153 9940 Hs.714499 NM_007335 ENSG00000008226 DLEC1 CFAP81|DLC-1|DLC1|F56 DLEC1 cilia and flagella associated protein protein-coding chr4-8398 chr4 151842855 151843065 + 6.95 0.000 Intergenic Intergenic -81937 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr10-9183 chr10 131120385 131120595 + 6.95 0.000 intron (NM_174937, intron 8 of 11) intron (NM_174937, intron 8 of 11) 25272 NR_120623 101927489 Hs.659317 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA chr10-6283 chr10 92732778 92732988 + 6.95 0.000 Intergenic Intergenic 42928 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr18-2610 chr18 25916769 25916979 + 6.95 0.000 Intergenic LOR1b|LTR|ERV1 173739 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr16-6521 chr16 62604080 62604290 + 6.95 0.000 Intergenic Intergenic -567747 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr11-7030 chr11 118745054 118745264 + 6.95 0.000 Intergenic AluSg|SINE|Alu 45789 NM_001257191 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr15-1991 chr15 42216282 42216492 + 6.95 0.000 intron (NM_015497, intron 19 of 19) L1MB1|LINE|L1 -8083 NM_015289 23339 Hs.88025 NM_015289 ENSG00000166887 VPS39 TLP|VAM6|hVam6p VPS39 subunit of HOPS complex protein-coding chr15-3492 chr15 97749960 97750170 + 6.95 0.000 intron (NR_024173, intron 1 of 1) intron (NR_024173, intron 1 of 1) 124364 NR_024173 91948 Hs.130423 NR_024172 ENSG00000251209 LINC00923 - long intergenic non-protein coding RNA 923 ncRNA chr3-8175 chr3 38474844 38475054 + 6.95 0.000 intron (NM_001106, intron 1 of 10) intron (NM_001106, intron 1 of 10) -20129 NR_028389 100128640 Hs.570596 NR_028389 ENSG00000229589 ACVR2B-AS1 - ACVR2B antisense RNA 1 ncRNA chr11-4608 chr11 3620255 3620465 + 6.95 0.000 Intergenic Intergenic -6100 NR_002720 7221 Hs.131910 NR_002720 ENSG00000182048 TRPC2 - transient receptor potential cation channel subfamily C member 2 (pseudogene) pseudo chr6-6026 chr6 116010931 116011141 + 6.95 0.000 intron (NM_002031, intron 1 of 7) intron (NM_002031, intron 1 of 7) -27695 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo chr3-9223 chr3 37865562 37865772 + 6.95 0.000 intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) 3787 NM_005808 10217 Hs.475963 NM_005808 ENSG00000144677 CTDSPL C3orf8|HYA22|PSR1|RBSP3|SCP3 CTD small phosphatase like protein-coding chr1-15810 chr1 177953706 177953916 + 6.95 0.000 intron (NR_151492, intron 20 of 22) intron (NR_151492, intron 20 of 22) 16111 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr2-10113 chr2 61555136 61555346 + 6.95 0.000 Intergenic Intergenic -16885 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr11-9103 chr11 32419079 32419289 + 6.95 0.000 intron (NR_160306, intron 3 of 9) intron (NR_160306, intron 3 of 9) 11629 NM_001198552 7490 Hs.591980 NM_000378 ENSG00000184937 WT1 AWT1|GUD|NPHS4|WAGR|WIT-2|WT33 WT1 transcription factor protein-coding chr1-12655 chr1 43774313 43774523 + 6.95 0.000 intron (NM_001270465, intron 2 of 7) intron (NM_001270465, intron 2 of 7) -47075 NR_125986 101929592 NR_125986 ENSG00000229444 LOC101929592 - uncharacterized LOC101929592 ncRNA chr20-465 chr20 32621291 32621501 + 6.95 0.000 Intergenic MIRb|SINE|MIR 33917 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr20-2288 chr20 4836102 4836312 + 6.95 0.000 Intergenic Intergenic -12599 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr1-12751 chr1 67565674 67565884 + 6.95 0.000 Intergenic MIRc|SINE|MIR -119422 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr2-11216 chr2 160970187 160970397 + 6.95 0.000 Intergenic Intergenic -166663 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr2-12526 chr2 65609185 65609395 + 6.95 0.000 Intergenic Intergenic -176691 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr5-7838 chr5 68715420 68715630 + 6.95 0.000 Intergenic Intergenic 314402 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr1-13584 chr1 8728069 8728279 + 6.95 0.000 intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 89466 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr14-2791 chr14 21063564 21063774 + 6.95 0.000 intron (NM_001282211, intron 1 of 14) intron (NM_001282211, intron 1 of 14) 5847 NM_138331 122665 Hs.553572 NM_138331 ENSG00000173431 RNASE8 RAE2 ribonuclease A family member 8 protein-coding chr11-8069 chr11 32177973 32178183 + 6.95 0.000 Intergenic Intergenic -34166 NR_132770 106635521 NR_132770 SNORA88 - small nucleolar RNA, H/ACA box 88 snoRNA chr2-5492 chr2 138998287 138998497 + 6.95 0.000 Intergenic Intergenic 101068 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr10-5106 chr10 48467786 48467996 + 6.95 0.000 intron (NR_144644, intron 3 of 8) intron (NR_144644, intron 3 of 8) 25759 NM_001256026 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr3-10393 chr3 129358134 129358344 + 6.95 0.000 Intergenic Intergenic 39109 NR_002992 677797 Hs.711399 NR_002992 ENSG00000207088 SNORA7B ACA7B small nucleolar RNA, H/ACA box 7B snoRNA chr2-5298 chr2 69890665 69890875 + 6.95 0.000 Intergenic MER45A|DNA|hAT-Tip100 -3186 NM_006857 11017 Hs.54649 NM_006857 ENSG00000124380 SNRNP27 27K|RY1 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 protein-coding chr4-7915 chr4 107316511 107316721 + 6.95 0.000 Intergenic Intergenic -280303 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr1-6976 chr1 162031495 162031705 + 6.95 0.000 Intergenic L2|LINE|L2 -7135 NM_001347700 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr9-6141 chr9 35481456 35481666 + 6.95 0.000 intron (NR_003581, intron 16 of 17) (CCCTG)n|Simple_repeat|Simple_repeat -8550 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr1-10146 chr1 106986364 106986574 + 6.95 0.000 Intergenic Intergenic -70205 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr19-3534 chr19 43700564 43700774 + 6.95 0.000 Intergenic Intergenic -15407 NM_019612 56269 Hs.515444 NM_019612 ENSG00000124449 IRGC CINEMA|IFGGE|IRGC1|Iigp5|R30953_1 immunity related GTPase cinema protein-coding chr12-2194 chr12 13347387 13347597 + 6.95 0.000 Intergenic Intergenic 29253 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr12-5820 chr12 27822093 27822303 + 6.95 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 41965 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr6-8172 chr6 132554364 132554574 + 6.95 0.000 TTS (NM_053278) TTS (NM_053278) 1785 NM_053278 83551 Hs.350571 NM_053278 ENSG00000146385 TAAR8 GPR102|TA5|TAR5|TRAR5|TaR-5|TaR-8 trace amine associated receptor 8 protein-coding chr5-6483 chr5 177411973 177412183 + 6.95 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -2502 NM_000505 2161 Hs.1321 NM_000505 ENSG00000131187 F12 HAE3|HAEX|HAF coagulation factor XII protein-coding chr2-5920 chr2 15094526 15094736 + 6.95 0.000 Intergenic LFSINE_Vert|SINE|tRNA 461914 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr4-3405 chr4 53694846 53695056 + 6.95 0.000 promoter-TSS (NR_125918) promoter-TSS (NR_125918) -950 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr5-1621 chr5 111461454 111461664 + 6.95 0.000 intron (NM_001744, intron 7 of 10) intron (NM_001744, intron 7 of 10) -50667 NR_040093 100505678 Hs.745061 NR_040093 ENSG00000246859 STARD4-AS1 - STARD4 antisense RNA 1 ncRNA chr2-4884 chr2 120238825 120239035 + 6.95 0.000 Intergenic Intergenic -13922 NM_002881 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chrX-2963 chrX 12142729 12142939 + 6.95 0.000 intron (NM_001368396, intron 1 of 16) intron (NM_001368396, intron 1 of 16) 4361 NM_001368401 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr14-3455 chr14 100617772 100617982 + 6.95 0.000 Intergenic Intergenic -39391 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chr2-11324 chr2 199786126 199786336 + 6.95 0.000 intron (NM_001350855, intron 3 of 3) intron (NM_001350855, intron 3 of 3) 64942 NM_001350853 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding chr13-2965 chr13 59112509 59112719 + 6.95 0.000 Intergenic Intergenic -879497 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr4-7999 chr4 116024844 116025054 + 6.95 0.000 Intergenic LTR16C|LTR|ERVL -274776 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr15-3799 chr15 70809992 70810202 + 6.95 0.000 Intergenic L2c|LINE|L2 -43142 NM_001284357 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr8-3973 chr8 51224870 51225080 + 6.95 0.000 Intergenic L1M4b|LINE|L1 584470 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr6-8627 chr6 170262713 170262923 + 6.95 0.000 promoter-TSS (NR_002787) promoter-TSS (NR_002787) -249 NR_002787 154449 Hs.447751 NR_002787 ENSG00000230960 LOC154449 - uncharacterized LOC154449 ncRNA chr1-14063 chr1 28875174 28875384 + 6.95 0.000 Intergenic L1MA4A|LINE|L1 -11812 NM_203342 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr6-8608 chr6 168531964 168532174 + 6.95 0.000 intron (NM_001166412, intron 4 of 12) intron (NM_001166412, intron 4 of 12) 90885 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr8-5142 chr8 73377382 73377592 + 6.95 0.000 Intergenic Intergenic -21026 NR_125388 101926926 Hs.640090 NR_125388 ENSG00000250295 RDH10-AS1 - RDH10 antisense RNA 1 ncRNA chr12-6452 chr12 92002471 92002681 + 6.95 0.000 intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 139137 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr10-5422 chr10 77297476 77297686 + 6.95 0.000 intron (NM_001271518, intron 1 of 27) MIRc|SINE|MIR 53180 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr11-7695 chr11 68278149 68278359 + 6.95 0.000 Intergenic MER21C|LTR|ERVL -6281 NM_001300913 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr17-2741 chr17 78717046 78717256 + 6.95 0.000 promoter-TSS (NM_001292019) promoter-TSS (NM_001292019) -119 NM_001292019 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr11-4968 chr11 68763576 68763786 + 6.95 0.000 intron (NM_001031847, intron 14 of 18) L2|LINE|L2 -12161 NM_001039656 9633 Hs.145932 NM_004923 ENSG00000132749 TESMIN CXCDC2|MTL5|MTLT testis expressed metallothionein like protein protein-coding chr2-14522 chr2 228916785 228916995 + 6.95 0.000 Intergenic ERVL-E-int|LTR|ERVL -305495 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr16-4060 chr16 1564614 1564824 + 6.95 0.000 intron (NM_014714, intron 16 of 30) intron (NM_014714, intron 16 of 30) -15808 NR_135176 105371046 Hs.663325 NR_135176 ENSG00000260989 LOC105371046 - uncharacterized LOC105371046 ncRNA chrX-3219 chrX 53224001 53224211 + 6.95 0.000 intron (NR_148673, intron 1 of 26) intron (NR_148673, intron 1 of 26) 1101 NR_148672 8242 Hs.631768 NM_004187 ENSG00000126012 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine demethylase 5C protein-coding chr4-4674 chr4 85297018 85297228 + 6.95 0.000 Intergenic L1ME3A|LINE|L1 -178027 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr4-6669 chr4 2500168 2500378 + 6.95 0.000 intron (NM_002938, intron 3 of 7) intron (NM_002938, intron 3 of 7) 30820 NM_001185009 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr17-6350 chr17 77006156 77006366 + 6.95 0.000 Intergenic Intergenic -37062 NR_136417 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr18-840 chr18 13627546 13627756 + 6.95 0.000 intron (NM_001003675, intron 2 of 2) Charlie8|DNA|hAT-Charlie -14107 NM_001276251 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr3-6127 chr3 54696366 54696576 + 6.95 0.000 intron (NM_018398, intron 11 of 37) intron (NM_018398, intron 11 of 37) -56614 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr15-2364 chr15 40484244 40484454 + 6.95 0.000 Intergenic AluJo|SINE|Alu 13388 NM_130468 113189 Hs.442449 NM_130468 ENSG00000169105 CHST14 ATCS|D4ST1|EDSMC1|HNK1ST carbohydrate sulfotransferase 14 protein-coding chr8-4811 chr8 14359531 14359741 + 6.95 0.000 intron (NM_001322881, intron 2 of 6) L1M1|LINE|L1 493874 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr11-7576 chr11 32297619 32297829 + 6.95 0.000 Intergenic Intergenic 102676 NM_001367854 7490 Hs.591980 NM_000378 ENSG00000184937 WT1 AWT1|GUD|NPHS4|WAGR|WIT-2|WT33 WT1 transcription factor protein-coding chr8-7156 chr8 122716924 122717134 + 6.95 0.000 Intergenic Intergenic -22923 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr4-4905 chr4 122118923 122119133 + 6.95 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -51575 NM_015312 84162 Hs.408142 NM_015312 ENSG00000138688 KIAA1109 ALKKUCS|FSA|Tweek KIAA1109 protein-coding chr12-7525 chr12 69341387 69341597 + 6.95 0.000 Intergenic Intergenic -6862 NM_000239 4069 Hs.524579 NM_000239 ENSG00000090382 LYZ LYZF1|LZM lysozyme protein-coding chr16-4143 chr16 4284041 4284251 + 6.95 0.000 Intergenic L2|LINE|L2 -11123 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chr2-12575 chr2 70032838 70033048 + 6.95 0.000 intron (NR_033872, intron 6 of 10) intron (NR_033872, intron 6 of 10) 54072 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA chr1-16331 chr1 217892471 217892681 + 6.95 0.000 promoter-TSS (NR_048550) promoter-TSS (NR_048550) -324 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chr7-6731 chr7 5272867 5273077 + 6.95 0.000 Intergenic MIRc|SINE|MIR -9971 NM_153247 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr10-8170 chr10 71268004 71268214 + 6.95 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -49881 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr13-4507 chr13 114337167 114337377 + 6.95 0.000 Intergenic Intergenic -3324 NR_126391 104355150 Hs.569217 NR_126391 LINC01054 - long intergenic non-protein coding RNA 1054 ncRNA chr1-11125 chr1 232600516 232600726 + 6.95 0.000 Intergenic Intergenic -85013 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr19-6661 chr19 33808269 33808479 + 6.95 0.000 intron (NM_001129994, intron 5 of 6) intron (NM_001129994, intron 5 of 6) 11504 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr16-5323 chr16 76290452 76290662 + 6.95 0.000 intron (NR_136213, intron 1 of 23) intron (NR_136213, intron 1 of 23) 13156 NM_001322188 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding chr3-9321 chr3 44415021 44415231 + 6.95 0.000 Intergenic Intergenic 7811 NM_001351479 102724231 Hs.131918 NM_001351479 C3orf86 LINC00694 chromosome 3 open reading frame 86 protein-coding chr10-3645 chr10 98536731 98536941 + 6.95 0.000 intron (NM_021828, intron 9 of 11) intron (NM_021828, intron 9 of 11) -89873 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr6-2916 chr6 17221739 17221949 + 6.95 0.000 Intergenic MER5A1|DNA|hAT-Charlie -59517 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr22-3017 chr22 24173904 24174114 + 6.95 0.000 intron (NM_012295, intron 34 of 36) (T)n|Simple_repeat|Simple_repeat -7478 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr2-5080 chr2 10521365 10521575 + 6.95 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 71742 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr11-5266 chr11 34032841 34033051 + 6.95 0.000 Intergenic AluJr|SINE|Alu -18785 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr22-2103 chr22 27880967 27881177 + 6.95 0.000 intron (NM_001284278, intron 7 of 11) intron (NM_001284278, intron 7 of 11) 38142 NM_001284278 23760 Hs.705323 NM_012399 ENSG00000180957 PITPNB PI-TP-beta|PtdInsTP|VIB1B phosphatidylinositol transfer protein beta protein-coding chrX-2919 chrX 152286387 152286597 + 6.95 0.000 intron (NM_000808, intron 3 of 9) intron (NM_000808, intron 3 of 9) 105807 NR_029521 406897 NR_029521 ENSG00000207957 MIR105-1 MIRN105-1|mir-105-1 microRNA 105-1 ncRNA chr17-7909 chr17 43976931 43977141 + 6.95 0.000 intron (NM_004160, intron 1 of 6) intron (NM_004160, intron 1 of 6) 27433 NM_004160 5697 Hs.169249 NM_004160 ENSG00000131096 PYY PYY-I|PYY1 peptide YY protein-coding chr3-8076 chr3 10334751 10334961 + 6.95 0.000 intron (NM_001330611, intron 20 of 21) intron (NM_001330611, intron 20 of 21) 4627 NR_036084 100422933 NR_036084 ENSG00000264534 MIR378B - microRNA 378b ncRNA chr10-6408 chr10 8031590 8031800 + 6.83 0.000 Intergenic Intergenic 20796 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 - GATA3 antisense RNA 1 ncRNA chr19-4867 chr19 39423028 39423238 + 6.83 0.000 exon (NM_001351693, exon 18 of 20) exon (NM_001351693, exon 18 of 20) 9354 NM_001351694 64857 Hs.631574 NM_022835 ENSG00000090924 PLEKHG2 ARHGEF42|CLG|CTB-60E11.4|LDAMD pleckstrin homology and RhoGEF domain containing G2 protein-coding chr6-7027 chr6 24066774 24066984 + 6.83 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -59336 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr1-11464 chr1 91359235 91359445 + 6.83 0.000 intron (NM_001017975, intron 13 of 38) L1PA11|LINE|L1 45497 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr13-1918 chr13 61643301 61643511 + 6.83 0.000 Intergenic AluSx|SINE|Alu -215460 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr11-10755 chr11 133917761 133917971 + 6.83 0.000 intron (NM_001277285, intron 18 of 19) intron (NM_001277285, intron 18 of 19) -16126 NR_024344 283174 Hs.504370 NM_001001873 ENSG00000280237 MIR4697HG LINC00947 MIR4697 host gene ncRNA chr2-12622 chr2 72124534 72124744 + 6.83 0.000 Intergenic L1MD2|LINE|L1 23223 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr7-6820 chr7 36620337 36620547 + 6.83 0.000 intron (NM_001177507, intron 8 of 19) intron (NM_001177507, intron 8 of 19) -20322 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chrX-2312 chrX 54838875 54839085 + 6.83 0.000 Intergenic L1MA2|LINE|L1 24610 NR_002953 677799 Hs.679783 NR_002953 ENSG00000221716 SNORA11 SNORA11A|U107 small nucleolar RNA, H/ACA box 11 snoRNA chr16-5029 chr16 55164488 55164698 + 6.83 0.000 Intergenic Intergenic -159966 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr8-4703 chr8 140567914 140568124 + 6.83 0.000 intron (NM_001164623, intron 3 of 17) AluSx3|SINE|Alu 56023 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr4-5372 chr4 187210412 187210622 + 6.83 0.000 intron (NR_147159, intron 2 of 2) MLT1A|LTR|ERVL-MaLR 8531 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr13-996 chr13 82057631 82057841 + 6.83 0.000 Intergenic L1MC4a|LINE|L1 -830753 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr12-4509 chr12 23099681 23099891 + 6.83 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -75850 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr17-7730 chr17 33509938 33510148 + 6.83 0.000 intron (NM_001094, intron 1 of 9) MIR3|SINE|MIR 23717 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr8-5424 chr8 32078529 32078739 + 6.83 0.000 intron (NR_104156, intron 3 of 3) intron (NR_104156, intron 3 of 3) 52416 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr1-11691 chr1 6904527 6904737 + 6.83 0.000 intron (NM_001349608, intron 2 of 21) AluJo|SINE|Alu 119178 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr19-4510 chr19 7611113 7611323 + 6.83 0.000 intron (NM_020902, intron 9 of 16) intron (NM_020902, intron 9 of 16) -6221 NR_106850 102465475 NR_106850 ENSG00000273657 MIR6792 hsa-mir-6792 microRNA 6792 ncRNA chr3-4506 chr3 88133110 88133320 + 6.83 0.000 intron (NM_001350135, intron 4 of 6) MLT1O|LTR|ERVL-MaLR 16651 NM_001195308 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding chr11-6622 chr11 74005346 74005556 + 6.83 0.000 intron (NM_003356, intron 4 of 6) intron (NM_003356, intron 4 of 6) 3634 NM_003356 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr4-7013 chr4 24744022 24744232 + 6.83 0.000 Intergenic Intergenic -51446 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr12-4884 chr12 64324923 64325133 + 6.83 0.000 intron (NM_001170633, intron 3 of 12) MER5A|DNA|hAT-Charlie 65730 NM_001170633 115749 Hs.535190 NM_001099676 ENSG00000185306 C12orf56 - chromosome 12 open reading frame 56 protein-coding chr15-4590 chr15 59770248 59770458 + 6.83 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -81033 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr3-8463 chr3 123392668 123392878 + 6.83 0.000 intron (NM_183357, intron 1 of 20) intron (NM_183357, intron 1 of 20) 23569 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr3-8982 chr3 16685848 16686058 + 6.83 0.000 Intergenic L1PA8|LINE|L1 -80530 NM_001351 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr19-5061 chr19 50327642 50327852 + 6.83 0.000 intron (NM_004977, intron 1 of 4) intron (NM_004977, intron 1 of 4) 1630 NM_004977 3748 Hs.467146 NM_004977 ENSG00000131398 KCNC3 KSHIIID|KV3.3|SCA13 potassium voltage-gated channel subfamily C member 3 protein-coding chr7-7344 chr7 50874034 50874244 + 6.83 0.000 Intergenic L1PA3|LINE|L1 -80686 NM_001371008 chr21-653 chr21 35581072 35581282 + 6.83 0.000 promoter-TSS (NR_073512) promoter-TSS (NR_073512) -413 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr2-5359 chr2 96195467 96195677 + 6.83 0.000 intron (NM_020151, intron 1 of 7) intron (NM_020151, intron 1 of 7) -12844 NR_046322 285033 Hs.58648 NM_001037228 STARD7-AS1 - STARD7 antisense RNA 1 ncRNA chr1-16535 chr1 232262911 232263121 + 6.83 0.000 Intergenic Intergenic 252592 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr15-2593 chr15 62083031 62083241 + 6.83 0.000 Intergenic Intergenic 16159 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding chr13-4406 chr13 110193052 110193262 + 6.83 0.000 intron (NM_001845, intron 22 of 51) intron (NM_001845, intron 22 of 51) 71455 NR_148221 105370361 Hs.134728 NR_148221 LOC105370361 - uncharacterized LOC105370361 ncRNA chr2-5977 chr2 60756685 60756895 + 6.83 0.000 intron (NM_022894, intron 1 of 21) intron (NM_022894, intron 1 of 21) 522 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr5-6550 chr5 14321333 14321543 + 6.83 0.000 intron (NM_007118, intron 9 of 56) intron (NM_007118, intron 9 of 56) -142545 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr5-8829 chr5 150789450 150789660 + 6.83 0.000 intron (NM_032947, intron 1 of 1) intron (NM_032947, intron 1 of 1) 11609 NM_032947 85027 Hs.29444 NM_032947 ENSG00000256235 SMIM3 C5orf62|MST150|NID67 small integral membrane protein 3 protein-coding chr5-6284 chr5 109493011 109493221 + 6.83 0.000 Intergenic MIRb|SINE|MIR -83142 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr9-8856 chr9 135814427 135814637 + 6.83 0.000 intron (NM_015447, intron 16 of 16) intron (NM_015447, intron 16 of 16) 93014 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr11-7099 chr11 122844774 122844984 + 6.83 0.000 intron (NM_019604, intron 1 of 9) MIRb|SINE|MIR 6379 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr1-13954 chr1 24400768 24400978 + 6.83 0.000 intron (NM_001199014, intron 2 of 9) MamGypLTR1c|LTR|Gypsy -12614 NM_001322854 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr6-5481 chr6 162084868 162085078 + 6.83 0.000 intron (NM_004562, intron 4 of 11) intron (NM_004562, intron 4 of 11) 613996 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr6-5432 chr6 157629251 157629461 + 6.83 0.000 intron (NM_024630, intron 4 of 8) intron (NM_024630, intron 4 of 8) 100224 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr10-7355 chr10 958626 958836 + 6.83 0.000 Intergenic Intergenic 25705 NR_120629 101927762 Hs.151159 NR_120629 ENSG00000229869 LOC101927762 - uncharacterized LOC101927762 ncRNA chr14-2675 chr14 74390899 74391109 + 6.83 0.000 Intergenic AluSx|SINE|Alu 35206 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr3-5473 chr3 186811464 186811674 + 6.83 0.000 non-coding (NR_125409, exon 4 of 4) non-coding (NR_125409, exon 4 of 4) -4874 NM_181573 5984 Hs.732098 NM_002916 ENSG00000163918 RFC4 A1|RFC37 replication factor C subunit 4 protein-coding chr4-3582 chr4 2006220 2006430 + 6.83 0.000 intron (NM_005663, intron 1 of 10) L1ME3B|LINE|L1 2649 NM_005663 7469 Hs.21771 NM_005663 ENSG00000185049 NELFA NELF-A|P/OKcl.15|WHSC2 negative elongation factor complex member A protein-coding chr17-7180 chr17 80193910 80194120 + 6.83 0.000 intron (NM_024110, intron 9 of 20) intron (NM_024110, intron 9 of 20) 6215 NM_052819 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr18-2042 chr18 46472042 46472252 + 6.83 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat 46939 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr16-3523 chr16 28573006 28573216 + 6.83 0.000 intron (NM_138414, intron 1 of 9) intron (NM_138414, intron 1 of 9) 19191 NM_138414 112869 Hs.655476 NM_138414 ENSG00000176476 SGF29 CCDC101|STAF36|TDRD29 SAGA complex associated factor 29 protein-coding chr10-4464 chr10 76037400 76037610 + 6.83 0.000 intron (NM_001305581, intron 3 of 6) intron (NM_001305581, intron 3 of 6) 254744 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr14-2613 chr14 59464238 59464448 + 6.83 0.000 exon (NM_022571, exon 1 of 1) exon (NM_022571, exon 1 of 1) 1037 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding chr6-4553 chr6 41452299 41452509 + 6.83 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -50040 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr17-8277 chr17 67789664 67789874 + 6.83 0.000 Intergenic AluJb|SINE|Alu -35734 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr4-3956 chr4 177613760 177613970 + 6.83 0.000 Intergenic MIR|SINE|MIR -114892 NR_028342 285501 Hs.722466 NM_001085490 ENSG00000231171 LINC01098 - long intergenic non-protein coding RNA 1098 ncRNA chr3-10150 chr3 115204511 115204721 + 6.83 0.000 Intergenic Intergenic -57328 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr12-4657 chr12 46164192 46164402 + 6.83 0.000 Intergenic MER5A|DNA|hAT-Charlie 102219 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr5-3170 chr5 73056908 73057118 + 6.83 0.000 intron (NM_001146032, intron 15 of 24) AluJr|SINE|Alu -63562 NM_001161342 134285 Hs.162246 NM_173490 ENSG00000157111 TMEM171 PRP2 transmembrane protein 171 protein-coding chr4-6639 chr4 1831536 1831746 + 6.83 0.000 intron (NM_012318, intron 6 of 13) L1MDa|LINE|L1 24515 NM_012318 3954 Hs.120165 NM_012318 ENSG00000168924 LETM1 SLC55A1 leucine zipper and EF-hand containing transmembrane protein 1 protein-coding chr1-15217 chr1 110785890 110786100 + 6.83 0.000 Intergenic MIR|SINE|MIR -85204 NM_001040033 963 Hs.443057 NM_000560 ENSG00000143119 CD53 MOX44|TSPAN25 CD53 molecule protein-coding chr14-2702 chr14 86347286 86347496 + 6.83 0.000 Intergenic Intergenic 412713 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr8-2233 chr8 28063286 28063496 + 6.83 0.000 intron (NM_001010906, intron 7 of 18) intron (NM_001010906, intron 7 of 18) 20545 NM_001010906 389643 Hs.370129 NM_001010906 ENSG00000189233 NUGGC C8orf80|HMFN0672|SLIP-GC nuclear GTPase, germinal center associated protein-coding chr5-7905 chr5 76506894 76507104 + 6.83 0.000 intron (NM_006633, intron 2 of 35) L1MC|LINE|L1 -40410 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr4-5354 chr4 184851050 184851260 + 6.83 0.000 promoter-TSS (NR_037510) promoter-TSS (NR_037510) -45 NR_037510 100500818 NR_037510 ENSG00000266698 MIR3945 - microRNA 3945 ncRNA chr4-3527 chr4 159075661 159075871 + 6.83 0.000 Intergenic Intergenic -28285 NM_001351724 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr5-6623 chr5 41009236 41009446 + 6.83 0.000 exon (NM_173489, exon 32 of 42) exon (NM_173489, exon 32 of 42) 62001 NM_173489 133558 Hs.97714 NM_173489 ENSG00000171495 MROH2B HEATR7B2|SPIF maestro heat like repeat family member 2B protein-coding chr6-8176 chr6 132730518 132730728 + 6.83 0.000 intron (NM_001368154, intron 2 of 5) intron (NM_001368154, intron 2 of 5) 4142 NM_001368156 55350 Hs.183656 NM_018399 VNN3 HSA238982 vanin 3 protein-coding chr12-7040 chr12 39240726 39240936 + 6.83 0.000 Intergenic Intergenic 202289 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr17-4804 chr17 50312270 50312480 + 6.83 0.000 Intergenic LTR79|LTR|ERVL -24520 NR_125805 103752589 Hs.612913 NR_125805 ENSG00000251179 TMEM92-AS1 TCONS_00025237|lncRNA-508851 TMEM92 antisense RNA 1 ncRNA chr2-12400 chr2 54795380 54795590 + 6.83 0.000 intron (NM_001039753, intron 1 of 40) intron (NM_001039753, intron 1 of 40) 70473 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr11-9317 chr11 45836767 45836977 + 6.83 0.000 Intergenic L1PA7|LINE|L1 -10246 NM_001127457 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr10-6053 chr10 127971994 127972204 + 6.83 0.000 intron (NM_001316676, intron 2 of 21) intron (NM_001316676, intron 2 of 21) -15181 NM_001316677 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr22-2380 chr22 46528195 46528405 + 6.83 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 9320 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr11-8780 chr11 10285419 10285629 + 6.83 0.000 intron (NM_030962, intron 1 of 39) MER51B|LTR|ERV1 8683 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr5-3950 chr5 3211787 3211997 + 6.83 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 34057 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr9-5072 chr9 33822232 33822442 + 6.83 0.000 intron (NM_017811, intron 1 of 4) AluSp|SINE|Alu 5177 NM_017811 54926 Hs.643648 NM_017811 ENSG00000107341 UBE2R2 CDC34B|E2-CDC34B|UBC3B ubiquitin conjugating enzyme E2 R2 protein-coding chr6-2952 chr6 35478369 35478579 + 6.83 0.000 exon (NM_003214, exon 6 of 13) exon (NM_003214, exon 6 of 13) 7966 NR_106961 102465668 NR_106961 ENSG00000276712 MIR7111 hsa-mir-7111 microRNA 7111 ncRNA chr6-7537 chr6 69105284 69105494 + 6.83 0.000 intron (NM_001704, intron 17 of 31) intron (NM_001704, intron 17 of 31) 470107 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chrX-3868 chrX 3538825 3539035 + 6.83 0.000 Intergenic Intergenic -6679 NR_145722 109616969 NR_145722 ENSG00000212214 SNORA48B - small nucleolar RNA, H/ACA box 48B snoRNA chr12-5806 chr12 20603117 20603327 + 6.83 0.000 intron (NM_001244683, intron 1 of 14) intron (NM_001244683, intron 1 of 14) 31358 NM_001244683 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr1-16074 chr1 202627097 202627307 + 6.83 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) 16251 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr14-5148 chr14 90946436 90946646 + 6.83 0.000 intron (NM_182398, intron 4 of 12) intron (NM_182398, intron 4 of 12) 113583 NM_001322237 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr5-7536 chr5 37966062 37966272 + 6.83 0.000 Intergenic Intergenic 17676 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA chr20-3081 chr20 16706428 16706638 + 6.83 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -23493 NM_003092 6629 Hs.280378 NM_003092 ENSG00000125870 SNRPB2 Msl1|U2B'' small nuclear ribonucleoprotein polypeptide B2 protein-coding chr11-6964 chr11 114243083 114243293 + 6.83 0.000 intron (NM_006006, intron 5 of 6) intron (NM_006006, intron 5 of 6) -52625 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr16-5596 chr16 53031658 53031868 + 6.83 0.000 Intergenic LTR103_Mam|LTR|ERV1? 21110 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr1-11302 chr1 16521030 16521240 + 6.83 0.000 Intergenic CpG -6850 NR_004430 26871 NR_004430 ENSG00000206652 RNU1-1 HSD1|HU1-1|RNU1|RNU1A|RNU1A3|RNU1G4|Rnu1a1|U1|U1A1 RNA, U1 small nuclear 1 snRNA chr9-5191 chr9 71922796 71923006 + 6.83 0.000 intron (NM_001365055, intron 2 of 4) AluSx3|SINE|Alu 11262 NM_001365055 138241 Hs.534190 NM_182505 ENSG00000155621 C9orf85 - chromosome 9 open reading frame 85 protein-coding chr4-5198 chr4 161429357 161429567 + 6.83 0.000 intron (NM_001128428, intron 14 of 14) L1MA3|LINE|L1 -593271 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr9-4052 chr9 106236729 106236939 + 6.83 0.000 Intergenic AluSx1|SINE|Alu -364094 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr5-8790 chr5 149305967 149306177 + 6.83 0.000 intron (NM_001323062, intron 5 of 17) L2c|LINE|L2 34213 NM_001323062 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr12-8267 chr12 125025307 125025517 + 6.83 0.000 TTS (NR_110375) TTS (NR_110375) 2011 NR_110375 102659353 Hs.596464 NR_110375 ENSG00000280634 THRIL BRI3BP-AS1|BRI3BPAS1|Linc1992|TCONS_00020260 TNF and HNRNPL related immunoregulatory long non-coding RNA ncRNA chr2-13754 chr2 170243449 170243659 + 6.83 0.000 intron (NM_001083615, intron 7 of 33) MIR|SINE|MIR 65407 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr11-8730 chr11 7548932 7549142 + 6.83 0.000 intron (NM_001351862, intron 2 of 24) intron (NM_001351862, intron 2 of 24) -27730 NM_001351861 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr12-7527 chr12 69459055 69459265 + 6.83 0.000 Intergenic (TTC)n|Simple_repeat|Simple_repeat -11228 NM_001042555 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding chr20-3349 chr20 31386642 31386852 + 6.83 0.000 intron (NR_073153, intron 1 of 2) L1MA5|LINE|L1 3843 NM_001271209 245932 Hs.516998 NM_153289 ENSG00000180483 DEFB119 DEFB-19|DEFB-20|DEFB120|DEFB20|ESC42-RELA|ESC42-RELB defensin beta 119 protein-coding chr14-1471 chr14 20871179 20871389 + 6.83 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -20119 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding chr2-13534 chr2 151858104 151858314 + 6.83 0.000 intron (NM_001330116, intron 7 of 10) intron (NM_001330116, intron 7 of 10) -29788 NM_177985 26225 Hs.470233 NM_012097 ENSG00000162980 ARL5A ARFLP5|ARL5 ADP ribosylation factor like GTPase 5A protein-coding chr15-2669 chr15 77509061 77509271 + 6.83 0.000 Intergenic Intergenic -16429 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr8-4049 chr8 62137609 62137819 + 6.83 0.000 Intergenic Intergenic -111140 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr3-6087 chr3 52306522 52306732 + 6.83 0.000 Intergenic L2a|LINE|L2 -9692 NM_015512 25981 Hs.655469 NM_015512 ENSG00000114841 DNAH1 CILD37|DNAHC1|HDHC7|HL-11|HL11|HSRF-1|SPGF18|XLHSRF-1 dynein axonemal heavy chain 1 protein-coding chr19-4600 chr19 12829791 12830001 + 6.83 0.000 exon (NM_031429, exon 3 of 7) exon (NM_031429, exon 3 of 7) 520 NM_001080997 83546 Hs.21162 NM_031429 ENSG00000132026 RTBDN - retbindin protein-coding chr10-7617 chr10 21749191 21749401 + 6.83 0.000 Intergenic Intergenic 215124 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr5-9076 chr5 171625469 171625679 + 6.83 0.000 Intergenic Intergenic -160298 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr4-7933 chr4 108765794 108766004 + 6.83 0.000 Intergenic AluSz|SINE|Alu -2846 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr8-6813 chr8 96575565 96575775 + 6.83 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -69572 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr10-8858 chr10 111444191 111444401 + 6.83 0.000 Intergenic Intergenic 330005 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr11-9063 chr11 29696667 29696877 + 6.83 0.000 Intergenic L1PB1|LINE|L1 77970 NR_149106 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr3-10526 chr3 138435088 138435298 + 6.83 0.000 intron (NR_136409, intron 1 of 22) CpG 577 NM_031913 83850 Hs.477711 NM_031913 ENSG00000158220 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin 3 protein-coding chr2-10508 chr2 228927492 228927702 + 6.83 0.000 Intergenic Intergenic 304495 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr18-2901 chr18 11725915 11726125 + 6.83 0.000 intron (NM_182978, intron 1 of 11) L1MC2|LINE|L1 -25452 NM_001142339 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr11-9110 chr11 32674127 32674337 + 6.83 0.000 intron (NM_001008391, intron 9 of 17) intron (NM_001008391, intron 9 of 17) 90401 NM_006360 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr19-5835 chr19 41731646 41731856 + 6.83 0.000 Intergenic MER65-int|LTR|ERV1 23125 NM_001291484 1048 Hs.709196 NM_004363 ENSG00000105388 CEACAM5 CD66e|CEA carcinoembryonic antigen related cell adhesion molecule 5 protein-coding chr1-5314 chr1 222263782 222263992 + 6.83 0.000 Intergenic L2a|LINE|L2 284217 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr15-5277 chr15 99762726 99762936 + 6.83 0.000 Intergenic Intergenic -29387 NM_001284422 145748 Hs.562568 NM_152449 ENSG00000183060 LYSMD4 - LysM domain containing 4 protein-coding chr5-5398 chr5 135239459 135239669 + 6.83 0.000 intron (NR_037895, intron 2 of 3) intron (NR_037895, intron 2 of 3) 8613 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr18-3464 chr18 69219282 69219492 + 6.83 0.000 Intergenic AluSz|SINE|Alu -181501 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr11-5347 chr11 63375832 63376042 + 6.83 0.000 intron (NM_080866, intron 5 of 9) intron (NM_080866, intron 5 of 9) 6152 NM_080866 114571 Hs.502772 NM_080866 ENSG00000149742 SLC22A9 HOAT4|OAT4|OAT7|UST3H|ust3 solute carrier family 22 member 9 protein-coding chr9-3524 chr9 34563628 34563838 + 6.83 0.000 intron (NM_001207011, intron 4 of 9) L2|LINE|L2 -4279 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr17-8101 chr17 56174185 56174395 + 6.83 0.000 intron (NM_153228, intron 1 of 16) intron (NM_153228, intron 1 of 16) 20815 NM_001365758 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr1-6336 chr1 5429368 5429578 + 6.83 0.000 Intergenic Intergenic 433268 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr1-8953 chr1 9075187 9075397 + 6.83 0.000 Intergenic MER83|LTR|ERV1 -3033 NM_001328619 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr2-6498 chr2 178315994 178316204 + 6.83 0.000 intron (NM_001201480, intron 3 of 25) intron (NM_001201480, intron 3 of 25) -4143 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr3-9695 chr3 65249395 65249605 + 6.83 0.000 Intergenic Intergenic -561500 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr10-8998 chr10 121193644 121193854 + 6.83 0.000 Intergenic Intergenic 337565 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr2-12413 chr2 55991999 55992209 + 6.83 0.000 intron (NR_126406, intron 2 of 2) intron (NR_126406, intron 2 of 2) -3045 NR_029629 406998 NR_029629 ENSG00000207798 MIR216A MIR216|MIRN216|MIRN216A|miRNA216|mir-216|mir-216a microRNA 216a ncRNA chr1-11992 chr1 91270410 91270620 + 6.83 0.000 intron (NM_001017975, intron 34 of 38) L2c|LINE|L2 134322 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr7-9277 chr7 124906997 124907207 + 6.83 0.000 intron (NM_001042594, intron 3 of 17) intron (NM_001042594, intron 3 of 17) 22723 NM_015450 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr22-3529 chr22 11253157 11253367 + 6.83 0.000 Intergenic CpG -291733 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr6-3065 chr6 73299480 73299690 + 6.83 0.000 intron (NR_027005, intron 2 of 4) CpG 10574 NM_001251874 80759 Hs.433062 NM_030568 ENSG00000135314 KHDC1 C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4 KH domain containing 1 protein-coding chr7-5961 chr7 100874444 100874654 + 6.83 0.000 promoter-TSS (NM_001128852) promoter-TSS (NM_001128852) -554 NM_015908 51593 Hs.111801 NM_015908 ENSG00000087087 SRRT ARS2|ASR2|serrate serrate, RNA effector molecule protein-coding chr3-5540 chr3 2254085 2254295 + 6.83 0.000 intron (NM_001206955, intron 1 of 23) L1PA7|LINE|L1 15361 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr5-5849 chr5 180101640 180101850 + 6.83 0.000 intron (NM_175062, intron 13 of 13) intron (NM_175062, intron 13 of 13) -29986 NM_018434 55819 Hs.484363 NM_018434 ENSG00000113269 RNF130 G1RZFP|GOLIATH|GP ring finger protein 130 protein-coding chr8-4306 chr8 97975060 97975270 + 6.83 0.000 intron (NM_002380, intron 5 of 18) Tigger13a|DNA|TcMar-Tigger 67052 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr2-5158 chr2 27888775 27888985 + 6.83 0.000 TTS (NR_028308) TTS (NR_028308) 171 NM_001329112 9577 Hs.258314 NM_004899 ENSG00000158019 BABAM2 BRCC4|BRCC45|BRE BRISC and BRCA1 A complex member 2 protein-coding chr13-1624 chr13 51078109 51078319 + 6.83 0.000 Intergenic SVA_D|Retroposon|SVA -12057 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr3-9610 chr3 57017057 57017267 + 6.83 0.000 intron (NM_001128615, intron 2 of 12) intron (NM_001128615, intron 2 of 12) -43502 NM_181727 353324 Hs.129794 NM_181727 ENSG00000186451 SPATA12 SRG5 spermatogenesis associated 12 protein-coding chr1-7993 chr1 206122735 206122945 + 6.83 0.000 Intergenic L1MC5|LINE|L1 -5452 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr13-3031 chr13 24042274 24042484 + 6.83 0.000 intron (NM_001286792, intron 3 of 14) intron (NM_001286792, intron 3 of 14) 62577 NR_104595 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr11-10073 chr11 84989606 84989816 + 6.83 0.000 intron (NM_001351274, intron 5 of 26) L1MD1|LINE|L1 -66290 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr18-3008 chr18 25137306 25137516 + 6.83 0.000 intron (NM_001308225, intron 4 of 6) intron (NM_001308225, intron 4 of 6) -149432 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr1-10885 chr1 206419893 206420103 + 6.83 0.000 intron (NM_015326, intron 11 of 21) intron (NM_015326, intron 11 of 21) -50478 NM_001193322 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of nuclear factor kappa B kinase subunit epsilon protein-coding chr14-3302 chr14 85196077 85196287 + 6.83 0.000 Intergenic Intergenic -75750 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr9-5812 chr9 129237244 129237454 + 6.83 0.000 Intergenic Intergenic -45067 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr3-6948 chr3 161266756 161266966 + 6.83 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 45571 NM_001320227 51068 Hs.598836 NM_015938 ENSG00000169251 NMD3 CGI-07 NMD3 ribosome export adaptor protein-coding chr12-6448 chr12 91556128 91556338 + 6.83 0.000 Intergenic Intergenic -373416 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr22-2519 chr22 24138670 24138880 + 6.83 0.000 intron (NM_012295, intron 29 of 36) MER21A|LTR|ERVL -42712 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr1-4278 chr1 10949948 10950158 + 6.83 0.000 intron (NM_001366227, intron 8 of 10) AluSz|SINE|Alu 16634 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr15-5188 chr15 93619111 93619321 + 6.83 0.000 Intergenic Intergenic -237344 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr5-7179 chr5 5708305 5708515 + 6.83 0.000 Intergenic Intergenic 285733 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr20-3928 chr20 32955419 32955629 + 6.83 0.000 intron (NM_001143967, intron 23 of 26) AluJo|SINE|Alu 48909 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr18-2802 chr18 3605182 3605392 + 6.83 0.000 intron (NR_119377, intron 1 of 2) intron (NR_119377, intron 1 of 2) 1550 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr11-4244 chr11 64964152 64964362 + 6.83 0.000 intron (NM_001037225, intron 1 of 10) intron (NM_001037225, intron 1 of 10) 7834 NM_001300803 283129 Hs.567793 NM_001037225 ENSG00000168070 MAJIN C11orf85 membrane anchored junction protein protein-coding chr17-6474 chr17 19295920 19296130 + 6.83 0.000 TTS (NR_048576) TTS (NR_048576) 10236 NR_048576 100874018 Hs.621672 NR_048576 ENSG00000235397 EPN2-AS1 - EPN2 antisense RNA 1 ncRNA chr5-4764 chr5 53425085 53425295 + 6.83 0.000 Intergenic Intergenic -55439 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr2-13796 chr2 173553885 173554095 + 6.83 0.000 Intergenic MER21C|LTR|ERVL 199118 NM_031942 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr13-3604 chr13 29028907 29029117 + 6.83 0.000 intron (NM_001033602, intron 1 of 13) intron (NM_001033602, intron 1 of 13) 4555 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr2-12722 chr2 80538851 80539061 + 6.83 0.000 intron (NM_001282599, intron 3 of 11) L1PA8|LINE|L1 225577 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chrX-971 chrX 130176071 130176281 + 6.83 0.000 intron (NM_004794, intron 1 of 1) intron (NM_004794, intron 1 of 1) 4214 NM_004794 9363 Hs.654356 NM_004794 ENSG00000134594 RAB33A RabS10 RAB33A, member RAS oncogene family protein-coding chr2-4637 chr2 175108412 175108622 + 6.83 0.000 intron (NR_045773, intron 9 of 13) SVA_C|Retroposon|SVA 59192 NR_030630 100126350 NR_030630 ENSG00000215973 MIR933 MIRN933|hsa-mir-933|mir-933 microRNA 933 ncRNA chr17-6345 chr17 75721233 75721443 + 6.83 0.000 promoter-TSS (NM_000213) promoter-TSS (NM_000213) -121 NM_001321123 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr8-3699 chr8 18666517 18666727 + 6.83 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 142245 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr5-9010 chr5 165474591 165474801 + 6.83 0.000 Intergenic LTR16A|LTR|ERVL 1004417 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr4-4230 chr4 16627904 16628114 + 6.83 0.000 intron (NM_001304435, intron 2 of 7) intron (NM_001304435, intron 2 of 7) 270636 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr1-8879 chr1 4749787 4749997 + 6.83 0.000 intron (NM_018836, intron 2 of 5) intron (NM_018836, intron 2 of 5) 95283 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr11-3863 chr11 76630212 76630422 + 6.83 0.000 Intergenic Intergenic 39621 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr5-7946 chr5 80025959 80026169 + 6.83 0.000 intron (NM_001306213, intron 2 of 22) intron (NM_001306213, intron 2 of 22) -9284 NM_003248 7060 Hs.211426 NM_003248 ENSG00000113296 THBS4 TSP-4|TSP4 thrombospondin 4 protein-coding chr5-8396 chr5 126178646 126178856 + 6.83 0.000 promoter-TSS (NR_105042) promoter-TSS (NR_105042) -826 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr1-8001 chr1 213376825 213377035 + 6.83 0.000 Intergenic Intergenic 325689 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr2-8234 chr2 96968806 96969016 + 6.83 0.000 intron (NM_001122646, intron 4 of 16) intron (NM_001122646, intron 4 of 16) 17669 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr6-5524 chr6 167095623 167095833 + 6.83 0.000 Intergenic Intergenic -16079 NM_004367 1235 Hs.46468 NM_004367 ENSG00000112486 CCR6 BN-1|C-C CKR-6|CC-CKR-6|CCR-6|CD196|CKR-L3|CKRL3|CMKBR6|DCR2|DRY6|GPR29|GPRCY4|STRL22 C-C motif chemokine receptor 6 protein-coding chr15-2145 chr15 74993379 74993589 + 6.83 0.000 Intergenic Intergenic -2079 NM_138967 192683 Hs.374180 NM_138967 ENSG00000198794 SCAMP5 - secretory carrier membrane protein 5 protein-coding chr6-5629 chr6 55734251 55734461 + 6.83 0.000 Intergenic Intergenic 141234 NM_001329756 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr12-8217 chr12 123685889 123686099 + 6.83 0.000 intron (NM_001143850, intron 5 of 17) AluJo|SINE|Alu 14881 NM_024809 79867 Hs.167165 NM_024809 ENSG00000168778 TCTN2 C12orf38|JBTS24|MKS8|TECT2 tectonic family member 2 protein-coding chrX-2263 chrX 48226191 48226401 + 6.83 0.000 Intergenic MER31-int|LTR|ERV1 -29096 NM_005635 6756 Hs.434142 NM_005635 ENSG00000126752 SSX1 CT5.1|SSRC SSX family member 1 protein-coding chr15-1370 chr15 80404189 80404399 + 6.83 0.000 promoter-TSS (NM_014862) promoter-TSS (NM_014862) -88 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr1-11060 chr1 225548362 225548572 + 6.83 0.000 intron (NM_001008493, intron 3 of 14) intron (NM_001008493, intron 3 of 14) 104656 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr5-5468 chr5 139208631 139208841 + 6.83 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -10368 NM_001037633 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chrX-3732 chrX 119942959 119943169 + 6.83 0.000 intron (NM_024528, intron 1 of 8) intron (NM_024528, intron 1 of 8) 687 NM_024528 79576 Hs.522771 NM_024528 ENSG00000101882 NKAP - NFKB activating protein protein-coding chr4-4776 chr4 100353512 100353722 + 6.83 0.000 Intergenic Intergenic 41630 NR_135619 107399301 NR_135619 SNORA101A - small nucleolar RNA, H/ACA box 101A snoRNA chr9-8829 chr9 135342101 135342311 + 6.83 0.000 Intergenic Intergenic -1043 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr6-7235 chr6 41223312 41223522 + 6.83 0.000 Intergenic L1MC1|LINE|L1 -4932 NM_198153 285852 Hs.434181 NM_198153 ENSG00000188056 TREML4 TLT-4|TLT4 triggering receptor expressed on myeloid cells like 4 protein-coding chr21-1207 chr21 44500698 44500908 + 6.83 0.000 intron (NM_144991, intron 11 of 11) L1M5|LINE|L1 -5241 NR_103707 54082 Hs.570444 NR_103707 ENSG00000235890 TSPEAR-AS1 C21orf31 TSPEAR antisense RNA 1 ncRNA chr10-8935 chr10 116607263 116607473 + 6.83 0.000 intron (NM_006229, intron 12 of 12) L2c|LINE|L2 -13585 NM_005396 5408 Hs.423598 NM_005396 ENSG00000266200 PNLIPRP2 PLRP2 pancreatic lipase related protein 2 (gene/pseudogene) protein-coding chr11-3759 chr11 46522532 46522742 + 6.83 0.000 intron (NM_001267782, intron 8 of 19) intron (NM_001267782, intron 8 of 19) 64807 NR_160027 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr11-9953 chr11 76714650 76714860 + 6.83 0.000 intron (NR_024042, intron 6 of 20) intron (NR_024042, intron 6 of 20) 7034 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr1-13674 chr1 11693875 11694085 + 6.83 0.000 intron (NM_198545, intron 1 of 6) intron (NM_198545, intron 1 of 6) 2270 NM_198545 374946 Hs.632364 NM_198545 ENSG00000162490 DRAXIN AGPA3119|C1orf187|UNQ3119|neucrin dorsal inhibitory axon guidance protein protein-coding chr6-6806 chr6 6122083 6122293 + 6.83 0.000 Intergenic MER52A|LTR|ERV1 -47146 NR_049863 100847034 NR_049863 ENSG00000283616 MIR5683 - microRNA 5683 ncRNA chr6-5727 chr6 147259997 147260207 + 6.83 0.000 intron (NM_139244, intron 4 of 25) intron (NM_139244, intron 4 of 25) -55488 NR_034115 729178 Hs.557608 NR_034115 STXBP5-AS1 - STXBP5 antisense RNA 1 ncRNA chr8-7348 chr8 135034005 135034215 + 6.83 0.000 Intergenic LTR78|LTR|ERV1 184175 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chrX-1668 chrX 153667888 153668098 + 6.83 0.000 Intergenic Intergenic 5295 NM_001135740 139728 Hs.436667 NM_198452 ENSG00000130822 PNCK BSTK3|CaMK1b pregnancy up-regulated nonubiquitous CaM kinase protein-coding chr18-1027 chr18 76763013 76763223 + 6.83 0.000 Intergenic AluJb|SINE|Alu 59177 NR_040024 100131655 Hs.385806 NR_040024 ENSG00000264278 ZNF236-DT - ZNF236 divergent transcript ncRNA chr3-6613 chr3 126481283 126481493 + 6.83 0.000 3' UTR (NM_144639, exon 20 of 20) 3' UTR (NM_144639, exon 20 of 20) -5469 NM_001040653 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr6-3753 chr6 12083941 12084151 + 6.83 0.000 intron (NM_002114, intron 2 of 8) intron (NM_002114, intron 2 of 8) 71734 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr7-6236 chr7 132636764 132636974 + 6.83 0.000 intron (NM_181775, intron 2 of 4) intron (NM_181775, intron 2 of 4) 11819 NM_181775 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr18-980 chr18 2903150 2903360 + 6.83 0.000 intron (NM_032048, intron 4 of 7) intron (NM_032048, intron 4 of 7) 43368 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo chr5-8735 chr5 145637438 145637648 + 6.83 0.000 Intergenic Intergenic 197799 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr4-4845 chr4 110021336 110021546 + 6.83 0.000 Intergenic L3|LINE|CR1 108558 NM_001178131 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr9-3303 chr9 79346727 79346937 + 6.83 0.000 Intergenic L2a|LINE|L2 -201166 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr16-6498 chr16 59245579 59245789 + 6.83 0.000 Intergenic Intergenic 509507 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr11-4488 chr11 111406703 111406913 + 6.83 0.000 Intergenic L2c|LINE|L2 11378 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr20-3331 chr20 23151075 23151285 + 6.83 0.000 Intergenic Intergenic -18544 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr2-8082 chr2 74426098 74426308 + 6.83 0.000 TTS (NM_001320823) TTS (NM_001320823) 4473 NM_001320824 84058 Hs.643480 NM_032118 ENSG00000005448 WDR54 - WD repeat domain 54 protein-coding chr15-4409 chr15 44092172 44092382 + 6.83 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) 102169 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr11-3932 chr11 130182182 130182392 + 6.83 0.000 intron (NM_021978, intron 1 of 18) intron (NM_021978, intron 1 of 18) 22505 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr17-7560 chr17 19572921 19573131 + 6.83 0.000 intron (NM_018242, intron 16 of 16) intron (NM_018242, intron 16 of 16) 15466 NR_003022 677882 Hs.658450 NR_003022 ENSG00000266079 SNORA59B ACA59 small nucleolar RNA, H/ACA box 59B snoRNA chr9-5473 chr9 99545204 99545414 + 6.83 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -170052 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr17-7368 chr17 7189421 7189631 + 6.83 0.000 TTS (NR_135527) TTS (NR_135527) -9962 NM_001197216 432 Hs.12056 NM_001671 ENSG00000141505 ASGR1 ASGPR|ASGPR1|CLEC4H1|HL-1 asialoglycoprotein receptor 1 protein-coding chr10-8577 chr10 95850162 95850372 + 6.83 0.000 intron (NM_001098175, intron 7 of 9) intron (NM_001098175, intron 7 of 9) -57698 NM_001130446 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr9-4996 chr9 21975103 21975313 + 6.83 0.000 promoter-TSS (NM_058197) promoter-TSS (NM_058197) -75 NM_000077 1029 Hs.512599 NM_000077 ENSG00000147889 CDKN2A ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16 cyclin dependent kinase inhibitor 2A protein-coding chr1-13775 chr1 17605750 17605960 + 6.83 0.000 intron (NM_018125, intron 6 of 28) intron (NM_018125, intron 6 of 28) -12458 NM_001328124 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr1-16282 chr1 213597744 213597954 + 6.83 0.000 Intergenic Intergenic -326900 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr8-3822 chr8 29212797 29213007 + 6.83 0.000 intron (NM_015254, intron 2 of 39) intron (NM_015254, intron 2 of 39) 50168 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr7-8858 chr7 89088639 89088849 + 6.83 0.000 intron (NM_181646, intron 1 of 3) intron (NM_181646, intron 1 of 3) -293007 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr13-3858 chr13 50709418 50709628 + 6.83 0.000 Intergenic LTR86B2|LTR|ERVL -98332 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr1-10458 chr1 160949316 160949526 + 6.83 0.000 non-coding (NR_110695, exon 6 of 6) non-coding (NR_110695, exon 6 of 6) 5388 NM_080878 142683 Hs.385631 NM_080878 ENSG00000158764 ITLN2 HL-2|HL2 intelectin 2 protein-coding chr3-9539 chr3 52563376 52563586 + 6.83 0.000 exon (NM_001366075, exon 27 of 31) exon (NM_001366075, exon 27 of 31) 26876 NM_001124767 440957 Hs.660577 NM_001124767 ENSG00000168273 SMIM4 C3orf78 small integral membrane protein 4 protein-coding chr16-4243 chr16 20564886 20565096 + 6.83 0.000 intron (NM_001105069, intron 1 of 13) intron (NM_001105069, intron 1 of 13) 11376 NM_182617 348158 Hs.298252 NM_182617 ENSG00000066813 ACSM2B ACSM2|HXMA|HYST1046 acyl-CoA synthetase medium chain family member 2B protein-coding chr11-4038 chr11 11585269 11585479 + 6.83 0.000 intron (NM_001363464, intron 1 of 9) AluSp|SINE|Alu 36631 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr10-4581 chr10 109887198 109887408 + 6.83 0.000 intron (NM_020383, intron 7 of 20) intron (NM_020383, intron 7 of 20) 35943 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr2-13029 chr2 108322708 108322918 + 6.83 0.000 intron (NR_037191, intron 1 of 3) L2c|LINE|L2 575 NR_037191 151234 Hs.447681 NR_037191 ENSG00000237223 SULT1C2P1 SULT1C1P sulfotransferase family 1C member 2 pseudogene 1 pseudo chr2-13079 chr2 111025402 111025612 + 6.83 0.000 intron (NM_001371254, intron 15 of 18) L1ME1|LINE|L1 90081 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr4-5975 chr4 177311487 177311697 + 6.83 0.000 intron (NM_018248, intron 1 of 9) AluSp|SINE|Alu 1718 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr1-14443 chr1 46029728 46029938 + 6.83 0.000 exon (NM_015112, exon 20 of 29) exon (NM_015112, exon 20 of 29) 100840 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr5-8210 chr5 107673732 107673942 + 6.83 0.000 Intergenic Intergenic -2900 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr3-8136 chr3 27930152 27930362 + 6.83 0.000 Intergenic L1MB2|LINE|L1 -96121 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr21-1424 chr21 16589206 16589416 + 6.83 0.000 promoter-TSS (NR_029694) promoter-TSS (NR_029694) 713 NR_136549 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr3-6373 chr3 88323787 88323997 + 6.83 0.000 Intergenic THE1D|LTR|ERVL-MaLR -14564 NM_001368165 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr5-6825 chr5 107486649 107486859 + 6.83 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 184183 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr1-10203 chr1 113178636 113178846 + 6.83 0.000 Intergenic L1PA17|LINE|L1 27512 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr10-8234 chr10 73973787 73973997 + 6.83 0.000 Intergenic L1MB8|LINE|L1 -24222 NM_014000 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr16-4997 chr16 20674516 20674726 + 6.83 0.000 intron (NR_134918, intron 3 of 10) HERV15-int|LTR|ERV1 16635 NM_052956 116285 Hs.306812 NM_052956 ENSG00000166743 ACSM1 BUCS1|MACS1 acyl-CoA synthetase medium chain family member 1 protein-coding chr12-5903 chr12 59657278 59657488 + 6.83 0.000 intron (NM_001270622, intron 2 of 5) intron (NM_001270622, intron 2 of 5) -31987 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chrX-3194 chrX 44117258 44117468 + 6.83 0.000 Intergenic Intergenic -143973 NM_000266 4693 Hs.522615 NM_000266 ENSG00000124479 NDP EVR2|FEVR|ND norrin cystine knot growth factor NDP protein-coding chr7-6038 chr7 109502176 109502386 + 6.83 0.000 Intergenic L1MDa|LINE|L1 457932 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr9-5161 chr9 39582562 39582772 + 6.83 0.000 Intergenic Intergenic -118141 NR_003528 401509 Hs.449445 NM_001032297 ZNF658B - zinc finger protein 658B (pseudogene) pseudo chr10-6531 chr10 68922615 68922825 + 6.83 0.000 intron (NM_024045, intron 8 of 14) AluJo|SINE|Alu 21405 NM_024045 79009 Hs.522984 NM_024045 ENSG00000107625 DDX50 GU2|GUB|RH-II/GuB|mcdrh DExD-box helicase 50 protein-coding chr1-8473 chr1 115898052 115898262 + 6.83 0.000 Intergenic MIRc|SINE|MIR -21219 NR_125969 101928995 Hs.559119 NR_125969 ENSG00000228127 LINC01649 - long intergenic non-protein coding RNA 1649 ncRNA chr8-5832 chr8 5596231 5596441 + 6.83 0.000 Intergenic L1MA7|LINE|L1 -601422 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr15-2688 chr15 80277678 80277888 + 6.83 0.000 intron (NR_033833, intron 2 of 2) LTR81C|LTR|Gypsy -25570 NM_001352888 100996492 Hs.20034 NM_001352888 ENSG00000259417 CTXND1 LINC01314 cortexin domain containing 1 protein-coding chr2-4799 chr2 42743377 42743587 + 6.83 0.000 intron (NM_001330443, intron 16 of 16) intron (NM_001330443, intron 16 of 16) 20779 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr7-8310 chr7 40870040 40870250 + 6.83 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 109794 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr1-15307 chr1 118023400 118023610 + 6.83 0.000 intron (NM_206996, intron 27 of 48) intron (NM_206996, intron 27 of 48) 93766 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding chr1-8643 chr1 203769457 203769667 + 6.83 0.000 promoter-TSS (NM_001282878) promoter-TSS (NM_001282878) -76 NM_001282878 54900 Hs.272794 NM_017773 ENSG00000122188 LAX1 LAX lymphocyte transmembrane adaptor 1 protein-coding chr16-5617 chr16 58413559 58413769 + 6.83 0.000 Intergenic Intergenic 21193 NM_001126129 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr6-3488 chr6 11971116 11971326 + 6.83 0.000 Intergenic MER21B|LTR|ERVL 30023 NR_125853 101928253 Hs.128163 NR_125853 LOC101928253 - uncharacterized LOC101928253 ncRNA chr2-6097 chr2 195564290 195564500 + 6.83 0.000 Intergenic Intergenic -92563 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr10-6299 chr10 101205345 101205555 + 6.83 0.000 Intergenic Intergenic 23510 NM_006562 10660 Hs.37128 NM_006562 ENSG00000138136 LBX1 HPX-6|HPX6|LBX1H|homeobox ladybird homeobox 1 protein-coding chr6-3832 chr6 37858031 37858241 + 6.83 0.000 intron (NM_021943, intron 1 of 5) intron (NM_021943, intron 1 of 5) 38409 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr1-15874 chr1 182523621 182523831 + 6.83 0.000 intron (NM_001366934, intron 11 of 22) L2b|LINE|L2 65530 NM_021133 6041 Hs.518545 NM_021133 ENSG00000135828 RNASEL PRCA1|RNS4 ribonuclease L protein-coding chr6-8618 chr6 169529893 169530103 + 6.83 0.000 intron (NR_146875, intron 19 of 20) intron (NR_146875, intron 19 of 20) 172031 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr5-6469 chr5 172652755 172652965 + 6.83 0.000 intron (NM_001308177, intron 1 of 3) HERVIP10FH-int|LTR|ERV1 -9305 NR_049799 100847029 NR_049799 ENSG00000265160 MIR5003 - microRNA 5003 ncRNA chr6-6435 chr6 98488142 98488352 + 6.83 0.000 Intergenic Intergenic 343453 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr18-1584 chr18 37325437 37325647 + 6.83 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 51082 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chrX-3541 chrX 55803970 55804180 + 6.83 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat 86326 NM_016656 10325 Hs.50282 NM_006064 ENSG00000083750 RRAGB RAGB|bA465E19.1 Ras related GTP binding B protein-coding chr17-4403 chr17 32265813 32266023 + 6.83 0.000 promoter-TSS (NM_001330181) promoter-TSS (NM_001330181) 86 NM_001330181 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr2-11683 chr2 8278095 8278305 + 6.83 0.000 intron (NR_152741, intron 8 of 9) intron (NR_152741, intron 8 of 9) 50219 NR_034135 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr22-1876 chr22 42828667 42828877 + 6.83 0.000 intron (NM_001142293, intron 5 of 14) AluSz6|SINE|Alu 28501 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr1-10317 chr1 151818090 151818300 + 6.83 0.000 intron (NM_005060, intron 2 of 10) MIR3|SINE|MIR 7901 NM_001001523 6097 Hs.256022 NM_005060 ENSG00000143365 RORC IMD42|NR1F3|RORG|RZR-GAMMA|RZRG|TOR RAR related orphan receptor C protein-coding chr8-5096 chr8 54019531 54019741 + 6.83 0.000 intron (NM_006756, intron 1 of 9) intron (NM_006756, intron 1 of 9) 2812 NM_201437 6917 Hs.491745 NM_006756 ENSG00000187735 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A1 protein-coding chr1-13796 chr1 18572858 18573068 + 6.83 0.000 Intergenic Intergenic -57883 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr1-14211 chr1 34942956 34943166 + 6.83 0.000 Intergenic L1ME3F|LINE|L1 -13411 NM_001080418 58512 Hs.436393 NM_001080418 ENSG00000116544 DLGAP3 DAP3|SAPAP3 DLG associated protein 3 protein-coding chr1-13077 chr1 180552056 180552266 + 6.83 0.000 Intergenic Intergenic -6813 NR_125716 148756 NR_125716 ENSG00000236719 OVAAL LINC01131|OVAL ovarian adenocarcinoma amplified long non-coding RNA ncRNA chr19-4732 chr19 19623676 19623886 + 6.83 0.000 3' UTR (NM_004720, exon 3 of 3) 3' UTR (NM_004720, exon 3 of 3) 4439 NM_004720 9170 Hs.122575 NM_004720 ENSG00000064547 LPAR2 EDG-4|EDG4|LPA-2|LPA2 lysophosphatidic acid receptor 2 protein-coding chr3-11238 chr3 196414784 196414994 + 6.83 0.000 intron (NM_015562, intron 1 of 10) (AACACAA)n|Simple_repeat|Simple_repeat -16496 NR_046745 100874034 Hs.617990 NR_046745 UBXN7-AS1 - UBXN7 antisense RNA 1 ncRNA chr11-8975 chr11 21169018 21169228 + 6.83 0.000 intron (NM_201551, intron 13 of 18) L4_A_Mam|LINE|RTE-X 499537 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr12-5665 chr12 90896292 90896502 + 6.83 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -21626 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr1-14164 chr1 32684403 32684613 + 6.83 0.000 3' UTR (NM_001135255, exon 12 of 12) 3' UTR (NM_001135255, exon 12 of 12) 18262 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr3-10997 chr3 179504555 179504765 + 6.83 0.000 Intergenic LTR78B|LTR|ERV1 -53190 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr7-4323 chr7 38237711 38237921 + 6.83 0.000 Intergenic Intergenic 35831 NM_001003806 445347 Hs.534032 NM_001003799 TARP CD3G|TCRG|TCRGC1|TCRGC2|TCRGV TCR gamma alternate reading frame protein protein-coding chr17-4404 chr17 33292417 33292627 + 6.83 0.000 5' UTR (NM_183377, exon 1 of 10) 5' UTR (NM_183377, exon 1 of 10) 466 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr11-3929 chr11 128039274 128039484 + 6.83 0.000 Intergenic Intergenic -169387 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr15-4270 chr15 35582725 35582935 + 6.83 0.000 intron (NR_038251, intron 1 of 2) intron (NR_038251, intron 1 of 2) 36635 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr9-2862 chr9 129066741 129066951 + 6.83 0.000 intron (NR_138423, intron 12 of 16) AluY|SINE|Alu -14265 NM_001135917 57171 Hs.21701 NM_020438 ENSG00000167130 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding chr5-7403 chr5 25192733 25192943 + 6.83 0.000 intron (NR_136209, intron 1 of 3) intron (NR_136209, intron 1 of 3) 1885 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr10-4730 chr10 846643 846853 + 6.83 0.000 intron (NM_001351277, intron 5 of 17) intron (NM_001351277, intron 5 of 17) 84957 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr8-5266 chr8 136190038 136190248 + 6.83 0.000 Intergenic Intergenic -340655 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr22-2695 chr22 37467882 37468092 + 6.83 0.000 Intergenic Intergenic 18397 NM_002405 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr1-15987 chr1 196011699 196011909 + 6.83 0.000 Intergenic Intergenic 76911 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr13-2325 chr13 33154110 33154320 + 6.83 0.000 intron (NM_178007, intron 3 of 13) intron (NM_178007, intron 3 of 13) 31876 NM_001243466 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr15-3563 chr15 40131236 40131446 + 6.83 0.000 Intergenic SATR1|Satellite|Satellite -22462 NM_001003940 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr11-8937 chr11 17883118 17883328 + 6.83 0.000 intron (NR_104041, intron 8 of 9) intron (NR_104041, intron 8 of 9) 129824 NM_012139 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr16-6879 chr16 84241338 84241548 + 6.83 0.000 Intergenic Intergenic -1693 NM_172347 93107 Hs.335877 NM_133490 ENSG00000168418 KCNG4 KV6.3|KV6.4 potassium voltage-gated channel modifier subfamily G member 4 protein-coding chr5-8587 chr5 137965505 137965715 + 6.83 0.000 intron (NM_001101801, intron 9 of 21) intron (NM_001101801, intron 9 of 21) -67164 NR_037900 100130172 Hs.616629 NR_037900 LOC100130172 - uncharacterized LOC100130172 ncRNA chr12-5444 chr12 123036110 123036320 + 6.83 0.000 intron (NM_020845, intron 1 of 24) MamTip3|DNA|hAT-Tip100 -25487 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chrX-5052 chrX 123580930 123581140 + 6.83 0.000 Intergenic Intergenic 152017 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr1-11446 chr1 77900509 77900719 + 6.83 0.000 intron (NM_001172309, intron 1 of 11) intron (NM_001172309, intron 1 of 11) -11075 NR_103535 374987 Hs.632414 NM_199343 ENSG00000235927 NEXN-AS1 C1orf118 NEXN antisense RNA 1 ncRNA chr17-8573 chr17 80162222 80162432 + 6.83 0.000 Intergenic MER41B|LTR|ERV1 -7703 NR_047566 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr10-8515 chr10 91033264 91033474 + 6.83 0.000 intron (NR_134319, intron 1 of 2) MIRb|SINE|MIR 203 NR_134319 105378430 Hs.512240 NR_134319 LOC105378430 - uncharacterized LOC105378430 ncRNA chr9-8563 chr9 127402613 127402823 + 6.83 0.000 exon (NM_001271712, exon 3 of 8) exon (NM_001271712, exon 3 of 8) 5549 NM_014580 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr11-8383 chr11 91368509 91368719 + 6.83 0.000 Intergenic AluYb8|SINE|Alu -499412 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr1-15224 chr1 111222557 111222767 + 6.83 0.000 Intergenic Intergenic -4997 NM_001025197 1117 Hs.514840 NM_004000 ENSG00000064886 CHI3L2 CHIL2|YKL-39|YKL39 chitinase 3 like 2 protein-coding chr18-1861 chr18 25073808 25074018 + 6.83 0.000 intron (NM_001308225, intron 6 of 6) intron (NM_001308225, intron 6 of 6) -85934 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr8-4358 chr8 101308782 101308992 + 6.83 0.000 Intergenic AluJb|SINE|Alu -60006 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr11-10328 chr11 109678500 109678710 + 6.83 0.000 Intergenic MIRb|SINE|MIR 256415 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr15-881 chr15 72101009 72101219 + 6.83 0.000 intron (NM_006901, intron 1 of 41) SVA_D|Retroposon|SVA -13144 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr4-3209 chr4 33301614 33301824 + 6.83 0.000 Intergenic AluJr|SINE|Alu 738174 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr5-2763 chr5 151075770 151075980 + 6.83 0.000 intron (NM_001252390, intron 1 of 17) intron (NM_001252390, intron 1 of 17) 5159 NM_001258454 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr13-3756 chr13 42842812 42843022 + 6.83 0.000 intron (NR_126389, intron 3 of 4) MIRc|SINE|MIR 29827 NR_126389 104355147 Hs.633967 NR_126388 LINC00428 - long intergenic non-protein coding RNA 428 ncRNA chr9-3860 chr9 131798665 131798875 + 6.83 0.000 Intergenic MIRb|SINE|MIR -58826 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr2-13545 chr2 152600702 152600912 + 6.83 0.000 intron (NM_052905, intron 9 of 25) intron (NM_052905, intron 9 of 25) 116654 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr4-3820 chr4 118772199 118772409 + 6.83 0.000 intron (NM_014822, intron 8 of 22) intron (NM_014822, intron 8 of 22) 63822 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr11-10225 chr11 98867111 98867321 + 6.83 0.000 Intergenic L2a|LINE|L2 -153733 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr18-2566 chr18 7313093 7313303 + 6.83 0.000 Intergenic Tigger2|DNA|TcMar-Tigger 82094 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr9-8441 chr9 122159167 122159377 + 6.83 0.000 promoter-TSS (NM_198469) promoter-TSS (NM_198469) 507 NM_001318195 4702 Hs.495039 NM_014222 ENSG00000119421 NDUFA8 CI-19KD|CI-PGIV|PGIV NADH:ubiquinone oxidoreductase subunit A8 protein-coding chr2-9153 chr2 211549346 211549556 + 6.83 0.000 intron (NM_001042599, intron 20 of 26) intron (NM_001042599, intron 20 of 26) 876909 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr14-3351 chr14 90456754 90456964 + 6.83 0.000 intron (NR_033986, intron 2 of 3) intron (NR_033986, intron 2 of 3) 1629 NR_033986 400238 Hs.131037 NR_033986 ENSG00000233208 LINC00642 - long intergenic non-protein coding RNA 642 ncRNA chr2-13082 chr2 111175916 111176126 + 6.83 0.000 Intergenic Intergenic 55107 NM_138623 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr15-2824 chr15 39430108 39430318 + 6.83 0.000 Intergenic Intergenic -150866 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr22-4149 chr22 44822711 44822921 + 6.83 0.000 intron (NM_181335, intron 6 of 11) intron (NM_181335, intron 6 of 11) 70258 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr12-6604 chr12 125808121 125808331 + 6.83 0.000 Intergenic AluSz|SINE|Alu 175148 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr9-8513 chr9 125492476 125492686 + 6.83 0.000 intron (NM_024117, intron 7 of 10) intron (NM_024117, intron 7 of 10) 214627 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chrX-4582 chrX 71618274 71618484 + 6.83 0.000 intron (NM_001142797, intron 1 of 1) intron (NM_001142797, intron 1 of 1) 132 NM_001504 2833 Hs.198252 NM_001504 ENSG00000186810 CXCR3 CD182|CD183|CKR-L2|CMKAR3|GPR9|IP10-R|Mig-R|MigR C-X-C motif chemokine receptor 3 protein-coding chr2-8908 chr2 180845227 180845437 + 6.83 0.000 intron (NR_104324, intron 4 of 4) L2c|LINE|L2 -135053 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chrX-3844 chrX 153061600 153061810 + 6.83 0.000 Intergenic L1M4a1|LINE|L1 5235 NM_001282535 29944 Hs.449627 NM_013364 ENSG00000183837 PNMA3 MA3|MA5 PNMA family member 3 protein-coding chr8-5713 chr8 130190919 130191129 + 6.83 0.000 intron (NM_001362925, intron 5 of 29) intron (NM_001362925, intron 5 of 29) 105509 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr1-13968 chr1 24921086 24921296 + 6.83 0.000 intron (NM_001320672, intron 4 of 6) MIRc|SINE|MIR -1775 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr6-1919 chr6 37860416 37860626 + 6.83 0.000 intron (NM_021943, intron 1 of 5) intron (NM_021943, intron 1 of 5) 40794 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr1-10596 chr1 176646954 176647164 + 6.83 0.000 intron (NM_021936, intron 3 of 4) L1MA3|LINE|L1 183884 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr10-8700 chr10 101792116 101792326 + 6.83 0.000 intron (NM_012215, intron 12 of 15) AluYc|SINE|Alu -8808 NM_006993 10360 Hs.90691 NM_006993 ENSG00000107833 NPM3 PORMIN|TMEM123 nucleophosmin/nucleoplasmin 3 protein-coding chr6-6574 chr6 137599157 137599367 + 6.83 0.000 Intergenic MamGypLTR3a|LTR|Gypsy -66384 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr9-2677 chr9 69759862 69760072 + 6.83 0.000 promoter-TSS (NM_001366940) promoter-TSS (NM_001366940) 44 NM_001366937 375743 Hs.744192 NM_001099666 ENSG00000188647 PTAR1 - protein prenyltransferase alpha subunit repeat containing 1 protein-coding chr6-4517 chr6 37928745 37928955 + 6.83 0.000 intron (NM_021943, intron 1 of 5) intron (NM_021943, intron 1 of 5) 109123 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr4-3511 chr4 147742072 147742282 + 6.83 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) 10089 NM_024605 79658 Hs.368631 NM_024605 ENSG00000071205 ARHGAP10 GRAF2|PS-GAP|PSGAP Rho GTPase activating protein 10 protein-coding chr9-6246 chr9 126049169 126049379 + 6.83 0.000 Intergenic Intergenic 226641 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr11-9244 chr11 42229296 42229506 + 6.83 0.000 intron (NR_038309, intron 4 of 5) L2b|LINE|L2 24289 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr8-4018 chr8 58594820 58595030 + 6.83 0.000 intron (NM_001144772, intron 22 of 30) intron (NM_001144772, intron 22 of 30) 41664 NM_005625 6386 Hs.200804 NM_005625 ENSG00000137575 SDCBP MDA-9|MDA9|ST1|SYCL|TACIP18 syndecan binding protein protein-coding chr3-9025 chr3 21437912 21438122 + 6.83 0.000 intron (NM_024697, intron 4 of 7) intron (NM_024697, intron 4 of 7) 32291 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr6-8312 chr6 144841137 144841347 + 6.83 0.000 intron (NM_007124, intron 72 of 73) intron (NM_007124, intron 72 of 73) 435587 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr1-12752 chr1 67722431 67722641 + 6.83 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 37335 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr5-8375 chr5 123174765 123174975 + 6.83 0.000 intron (NM_001136239, intron 6 of 7) intron (NM_001136239, intron 6 of 7) -84554 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr1-14590 chr1 53678590 53678800 + 6.83 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 55509 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr7-2387 chr7 43971109 43971319 + 6.83 0.000 intron (NR_003655, intron 9 of 15) intron (NR_003655, intron 9 of 15) -29676 NM_175064 285955 Hs.645483 NM_175064 ENSG00000136206 SPDYE1 Ringo1|SPDYB2L2|SPDYE|WBSCR19 speedy/RINGO cell cycle regulator family member E1 protein-coding chr18-3352 chr18 57656777 57656987 + 6.83 0.000 intron (NM_005603, intron 22 of 27) MLT1O|LTR|ERVL-MaLR 26551 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr6-6210 chr6 16113990 16114200 + 6.83 0.000 Intergenic Intergenic -14991 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr5-8371 chr5 122384706 122384916 + 6.83 0.000 intron (NM_001308107, intron 1 of 8) intron (NM_001308107, intron 1 of 8) -6278 NM_001308106 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr18-2700 chr18 61084384 61084594 + 6.83 0.000 Intergenic Intergenic -248941 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr11-5875 chr11 11082243 11082453 + 6.83 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 224131 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr2-9864 chr2 188676045 188676255 + 6.83 0.000 Intergenic MamRTE1|LINE|RTE-BovB 113973 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr4-4243 chr4 18111364 18111574 + 6.83 0.000 Intergenic MIRb|SINE|MIR -89594 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr5-6546 chr5 13244273 13244483 + 6.83 0.000 Intergenic LTR12C|LTR|ERV1 -211492 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr10-7662 chr10 26922962 26923172 + 6.83 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger 18934 NR_026795 387644 Hs.529965 NR_026795 ENSG00000283709 FAM238C C10orf51|LINC00202|LINC00202-1|NCRNA00202|bB27G4.1 family with sequence similarity 238 member C ncRNA chr9-5387 chr9 92747066 92747276 + 6.83 0.000 intron (NM_001003800, intron 1 of 6) intron (NM_001003800, intron 1 of 6) 17662 NM_001003800 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chr2-12112 chr2 34691808 34692018 + 6.83 0.000 intron (NR_126404, intron 1 of 2) L1PA16|LINE|L1 14356 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr7-9399 chr7 131431036 131431246 + 6.83 0.000 intron (NM_001321316, intron 9 of 17) AluSx1|SINE|Alu 103265 NM_001321316 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr10-1828 chr10 13348425 13348635 + 6.83 0.000 promoter-TSS (NM_012247) promoter-TSS (NM_012247) -232 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr10-7363 chr10 1484692 1484902 + 6.83 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -41833 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr13-1288 chr13 30445905 30446115 + 6.83 0.000 Intergenic Intergenic 18317 NM_001313892 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr16-6977 chr16 86556502 86556712 + 6.83 0.000 non-coding (NR_026674, exon 1 of 1) non-coding (NR_026674, exon 1 of 1) 1287 NR_026674 146512 Hs.97422 NM_153017 ENSG00000280278 FLJ30679 - uncharacterized protein FLJ30679 ncRNA chr7-2398 chr7 50460255 50460465 + 6.83 0.000 intron (NM_001242888, intron 12 of 12) SVA_D|Retroposon|SVA -9954 NM_001287493 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr15-3884 chr15 94315681 94315891 + 6.83 0.000 intron (NM_018349, intron 3 of 21) MIRb|SINE|MIR 17585 NM_001159643 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr9-8318 chr9 114312577 114312787 + 6.83 0.000 TTS (NM_032888) TTS (NM_032888) -10341 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr14-3449 chr14 100166422 100166632 + 6.83 0.000 Intergenic Intergenic -6882 NM_206918 123099 Hs.159643 NM_206918 ENSG00000168350 DEGS2 C14orf66|DES2|FADS8 delta 4-desaturase, sphingolipid 2 protein-coding chr4-3211 chr4 37669438 37669648 + 6.83 0.000 intron (NM_001085400, intron 1 of 6) SVA_D|Retroposon|SVA 16833 NM_001085400 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr8-1898 chr8 26329917 26330127 + 6.83 0.000 intron (NM_001177591, intron 2 of 9) intron (NM_001177591, intron 2 of 9) 36806 NM_001177591 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr13-3789 chr13 45150231 45150441 + 6.83 0.000 intron (NM_004128, intron 3 of 7) intron (NM_004128, intron 3 of 7) 29826 NM_004128 2963 Hs.654582 NM_004128 ENSG00000188342 GTF2F2 BTF4|RAP30|TF2F2|TFIIF general transcription factor IIF subunit 2 protein-coding chr18-2915 chr18 12252906 12253116 + 6.83 0.000 Intergenic Intergenic -1350 NR_134607 1149 Hs.249129 NM_001279 ENSG00000176194 CIDEA CIDE-A cell death inducing DFFA like effector a protein-coding chr11-8974 chr11 21094613 21094823 + 6.83 0.000 intron (NM_201551, intron 12 of 18) THE1B-int|LTR|ERVL-MaLR 425132 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr13-4368 chr13 107240074 107240284 + 6.83 0.000 intron (NM_001080396, intron 1 of 2) MLT1A0|LTR|ERVL-MaLR 80784 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chr20-2483 chr20 32883479 32883689 + 6.83 0.000 intron (NM_001143967, intron 5 of 26) MER21-int|LTR|ERVL 24661 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr2-14108 chr2 200848878 200849088 + 6.83 0.000 Intergenic FLAM_A|SINE|Alu 15578 NM_001162407 1195 Hs.433732 NM_004071 ENSG00000013441 CLK1 CLK|CLK/STY|STY CDC like kinase 1 protein-coding chr2-8464 chr2 122786537 122786747 + 6.83 0.000 Intergenic Intergenic 286839 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr2-13139 chr2 118264562 118264772 + 6.83 0.000 Intergenic Intergenic -78281 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr5-4648 chr5 35790157 35790367 + 6.83 0.000 intron (NM_024867, intron 30 of 36) intron (NM_024867, intron 30 of 36) -66629 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr22-3415 chr22 37369452 37369662 + 6.83 0.000 3' UTR (NM_052906, exon 3 of 3) 3' UTR (NM_052906, exon 3 of 3) -14718 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr7-3623 chr7 39497966 39498176 + 6.83 0.000 Intergenic Intergenic -68333 NM_001282446 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr4-7894 chr4 105605464 105605674 + 6.83 0.000 intron (NM_001242729, intron 2 of 13) intron (NM_001242729, intron 2 of 13) 43978 NR_046840 100874374 Hs.668908 NR_046840 ENSG00000249885 ARHGEF38-IT1 - ARHGEF38 intronic transcript 1 ncRNA chr12-5639 chr12 68395548 68395758 + 6.83 0.000 Intergenic Intergenic 55831 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr10-5909 chr10 119300346 119300556 + 6.83 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) -77521 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr4-6496 chr4 154762665 154762875 + 6.83 0.000 Intergenic Intergenic -18502 NM_144979 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr10-7059 chr10 85986686 85986896 + 6.83 0.000 intron (NM_017551, intron 4 of 15) L2a|LINE|L2 277997 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr2-8854 chr2 174341692 174341902 + 6.83 0.000 Intergenic CpG 6843 NM_001145250 100131390 NM_001145250 ENSG00000217236 SP9 ZNF990 Sp9 transcription factor protein-coding chr17-7779 chr17 39243075 39243285 + 6.83 0.000 Intergenic Intergenic -17235 NM_198993 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr20-3333 chr20 23703066 23703276 + 6.83 0.000 Intergenic LTR16|LTR|ERVL -14146 NM_001899 1472 Hs.654549 NM_001899 ENSG00000101441 CST4 - cystatin S protein-coding chr19-5168 chr19 6305568 6305778 + 6.83 0.000 TTS (NM_133492) TTS (NM_133492) -25698 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr1-13691 chr1 12664460 12664670 + 6.83 0.000 intron (NM_001013630, intron 3 of 3) AluSx1|SINE|Alu 20018 NM_001013630 343066 Hs.209954 NM_001013630 ENSG00000204518 AADACL4 - arylacetamide deacetylase like 4 protein-coding chr20-2400 chr20 19110457 19110667 + 6.83 0.000 Intergenic Intergenic -102080 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr8-4387 chr8 103076420 103076630 + 6.83 0.000 Intergenic Intergenic -44507 NR_145429 379034 Hs.591862 NR_145429 LINC01181 - long intergenic non-protein coding RNA 1181 ncRNA chr1-15431 chr1 153230325 153230535 + 6.83 0.000 Intergenic Intergenic 12846 NM_001195571 574414 Hs.135098 NM_001195571 ENSG00000203783 PRR9 - proline rich 9 protein-coding chr17-7512 chr17 17341367 17341577 + 6.83 0.000 intron (NM_020201, intron 3 of 4) MIRb|SINE|MIR 38099 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr9-6828 chr9 38019717 38019927 + 6.83 0.000 intron (NM_003028, intron 1 of 5) L1ME3G|LINE|L1 49405 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chrX-4867 chrX 105195958 105196168 + 6.83 0.000 intron (NM_017416, intron 3 of 10) AluSx1|SINE|Alu 24630 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr15-3237 chr15 74665344 74665554 + 6.83 0.000 intron (NM_001142443, intron 6 of 9) intron (NM_001142443, intron 6 of 9) 30575 NM_001142444 80153 Hs.96852 NM_025083 ENSG00000179151 EDC3 LSM16|MRT50|YJDC|YJEFN2|hYjeF_N2-15q23 enhancer of mRNA decapping 3 protein-coding chr13-4442 chr13 111922185 111922395 + 6.83 0.000 Intergenic Intergenic 28794 NR_120401 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr1-10024 chr1 87169371 87169581 + 6.83 0.000 TTS (NR_026989) TTS (NR_026989) 37550 NR_026986 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr11-5108 chr11 120564980 120565190 + 6.83 0.000 intron (NM_001282470, intron 1 of 19) CpG 649 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr13-2441 chr13 48094385 48094595 + 6.83 0.000 intron (NM_001270629, intron 1 of 6) L2c|LINE|L2 614 NM_014166 29079 Hs.181112 NM_014166 ENSG00000136146 MED4 ARC36|DRIP36|HSPC126|TRAP36|VDRIP mediator complex subunit 4 protein-coding chr8-5876 chr8 15004008 15004218 + 6.83 0.000 intron (NM_139167, intron 1 of 7) LTR60B|LTR|ERV1 -150603 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr11-6347 chr11 63456164 63456374 + 6.83 0.000 Intergenic HERVH-int|LTR|ERV1 34898 NM_001146729 117245 Hs.410316 NM_054108 ENSG00000168004 PLAAT5 HRASLS5|HRLP5|HRSL5|PLAAT-5|RLP1|iNAT phospholipase A and acyltransferase 5 protein-coding chr3-7212 chr3 192041936 192042146 + 6.83 0.000 Intergenic Intergenic -196589 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr2-10588 chr2 241498993 241499203 + 6.83 0.000 exon (NM_001271977, exon 7 of 12) exon (NM_001271977, exon 7 of 12) 9247 NM_001271978 10494 Hs.516807 NM_006374 ENSG00000115694 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding chr1-6694 chr1 53846610 53846820 + 6.83 0.000 Intergenic L1M8|LINE|L1 -8419 NM_018087 55706 Hs.476525 NM_018087 ENSG00000058804 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding chr3-7420 chr3 114341187 114341397 + 6.83 0.000 intron (NR_121662, intron 6 of 6) intron (NR_121662, intron 6 of 6) -10519 NR_038993 100131117 Hs.122417 NR_038993 ENSG00000241560 ZBTB20-AS1 - ZBTB20 antisense RNA 1 ncRNA chr6-5558 chr6 169983783 169983993 + 6.83 0.000 Intergenic Intergenic 21265 NR_027434 100131532 Hs.703417 NR_027434 LOC100131532 - uncharacterized LOC100131532 ncRNA chr12-7809 chr12 98939974 98940184 + 6.83 0.000 intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) -44788 NM_001352208 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr1-15931 chr1 186800309 186800519 + 6.83 0.000 Intergenic Intergenic -28486 NM_024420 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr10-4894 chr10 19629299 19629509 + 6.83 0.000 intron (NM_001142308, intron 36 of 39) intron (NM_001142308, intron 36 of 39) 99146 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr19-3252 chr19 1922034 1922244 + 6.83 0.000 intron (NM_079834, intron 5 of 6) intron (NM_079834, intron 5 of 6) 16740 NM_001329540 113178 Hs.144980 NM_079834 ENSG00000227500 SCAMP4 SCAMP-4 secretory carrier membrane protein 4 protein-coding chr5-5737 chr5 170000926 170001136 + 6.83 0.000 intron (NR_156756, intron 31 of 52) intron (NR_156756, intron 31 of 52) -20536 NM_001129891 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr12-4261 chr12 116266276 116266486 + 6.83 0.000 intron (NM_015335, intron 1 of 30) intron (NM_015335, intron 1 of 30) 10805 NM_015335 23389 Hs.603766 NM_015335 ENSG00000123066 MED13L MRFACD|PROSIT240|THRAP2|TRAP240L mediator complex subunit 13L protein-coding chrX-3246 chrX 75820578 75820788 + 6.83 0.000 Intergenic Intergenic -35429 NM_138703 139599 Hs.356869 NM_138703 ENSG00000186675 MAGEE2 HCA3 MAGE family member E2 protein-coding chr2-3204 chr2 219058051 219058261 + 6.83 0.000 TTS (NR_036081) TTS (NR_036081) 594 NR_036081 100422957 NR_036081 ENSG00000264755 MIR3131 mir-3131 microRNA 3131 ncRNA chr1-12434 chr1 12093333 12093543 + 6.83 0.000 intron (NM_001243, intron 2 of 14) intron (NM_001243, intron 2 of 14) 30061 NM_001281430 943 Hs.1314 NM_001243 ENSG00000120949 TNFRSF8 CD30|D1S166E|Ki-1 TNF receptor superfamily member 8 protein-coding chr1-13083 chr1 181383663 181383873 + 6.83 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -99749 NM_000721 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr8-6479 chr8 62650608 62650818 + 6.83 0.000 intron (NM_001304533, intron 3 of 6) intron (NM_001304533, intron 3 of 6) -327148 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr20-2549 chr20 36117811 36118021 + 6.83 0.000 intron (NM_001258329, intron 2 of 22) intron (NM_001258329, intron 2 of 22) 25206 NM_001258329 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr16-4625 chr16 71670057 71670267 + 6.83 0.000 intron (NM_015020, intron 10 of 18) L2c|LINE|L2 28539 NR_033337 100379141 Hs.725116 NR_033337 ENSG00000263666 SNORA70D U70D small nucleolar RNA, H/ACA box 70D snoRNA chr2-12567 chr2 69545778 69545988 + 6.83 0.000 intron (NM_014911, intron 3 of 21) L2|LINE|L2 -25712 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr21-1675 chr21 26959053 26959263 + 6.83 0.000 intron (NM_007038, intron 1 of 7) intron (NM_007038, intron 1 of 7) 5197 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 - microRNA 4759 ncRNA chr1-5598 chr1 8924604 8924814 + 6.83 0.000 Intergenic HERVFH21-int|LTR|ERV1 -21159 NM_001270502 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr11-8836 chr11 12476475 12476685 + 6.83 0.000 intron (NM_018222, intron 3 of 12) L2c|LINE|L2 99009 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr14-3372 chr14 92452202 92452412 + 6.83 0.000 intron (NM_153646, intron 10 of 16) intron (NM_153646, intron 10 of 16) -61474 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr16-2346 chr16 50552016 50552226 + 6.83 0.000 intron (NM_033119, intron 3 of 9) intron (NM_033119, intron 3 of 9) 3725 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr12-6545 chr12 116049161 116049371 + 6.83 0.000 intron (NM_015335, intron 4 of 30) intron (NM_015335, intron 4 of 30) 99388 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr20-2678 chr20 45625109 45625319 + 6.83 0.000 intron (NM_147198, intron 1 of 4) THE1D|LTR|ERVL-MaLR -4525 NM_080753 140832 Hs.199380 NM_080753 ENSG00000180305 WFDC10A C20orf146|WAP10|dJ688G8.3 WAP four-disulfide core domain 10A protein-coding chr11-8462 chr11 116449150 116449360 + 6.83 0.000 Intergenic THE1D|LTR|ERVL-MaLR -190167 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr16-1743 chr16 80231878 80232088 + 6.83 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -308751 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr8-7460 chr8 141630389 141630599 + 6.83 0.000 Intergenic Intergenic -123264 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr7-8402 chr7 45568779 45568989 + 6.83 0.000 Intergenic Intergenic -5256 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chrX-4986 chrX 117391716 117391926 + 6.83 0.000 Intergenic AluSx1|SINE|Alu -573961 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr5-8476 chr5 132370581 132370791 + 6.83 0.000 promoter-TSS (NR_110997) promoter-TSS (NR_110997) -770 NR_110997 553103 Hs.570908 NR_110997 ENSG00000233006 MIR3936HG SLC22A5-AS1 MIR3936 host gene ncRNA chr14-3397 chr14 95445776 95445986 + 6.83 0.000 intron (NM_001363692, intron 8 of 16) intron (NM_001363692, intron 8 of 16) 29954 NM_152592 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|KASH3|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chr3-8504 chr3 131166901 131167111 + 6.83 0.000 intron (NM_001353027, intron 12 of 16) intron (NM_001353027, intron 12 of 16) 139278 NM_001321223 79858 Hs.657336 NM_024800 ENSG00000114670 NEK11 - NIMA related kinase 11 protein-coding chr12-3451 chr12 116120242 116120452 + 6.83 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) 28307 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr10-6210 chr10 42943623 42943833 + 6.83 0.000 Intergenic L1MD2|LINE|L1 37779 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr1-7507 chr1 151814383 151814593 + 6.83 0.000 intron (NM_005060, intron 6 of 10) intron (NM_005060, intron 6 of 10) -9046 NM_001004432 339398 Hs.591477 NM_001004432 ENSG00000213171 LINGO4 DAAT9248|LRRN6D|PRO34002 leucine rich repeat and Ig domain containing 4 protein-coding chr3-11032 chr3 182631405 182631615 + 6.83 0.000 Intergenic Intergenic -124386 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr12-5321 chr12 113736083 113736293 + 6.83 0.000 Intergenic L2a|LINE|L2 37495 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr11-3680 chr11 280228 280438 + 6.83 0.000 exon (NM_001276700, exon 4 of 8) exon (NM_001276700, exon 4 of 8) 1763 NM_138329 171389 Hs.352611 NM_138329 ENSG00000174885 NLRP6 AVR|CLR11.4|NALP6|NAVR|NAVR/AVR|PAN3|PYPAF5 NLR family pyrin domain containing 6 protein-coding chr11-10753 chr11 133700242 133700452 + 6.83 0.000 Intergenic MSTC|LTR|ERVL-MaLR 110029 NR_120444 646522 Hs.560000 NR_120444 ENSG00000255258 LINC02743 - long intergenic non-protein coding RNA 2743 ncRNA chr12-8275 chr12 125391212 125391422 + 6.83 0.000 intron (NM_052907, intron 2 of 8) intron (NM_052907, intron 2 of 8) 64701 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr5-2054 chr5 127290065 127290275 + 6.83 0.000 promoter-TSS (NM_032446) promoter-TSS (NM_032446) -594 NM_001308121 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr20-2664 chr20 44798463 44798673 + 6.83 0.000 intron (NM_001205317, intron 1 of 5) LTR16A1|LTR|ERVL 11978 NM_182970 140730 Hs.517065 NM_182970 ENSG00000101098 RIMS4 C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma regulating synaptic membrane exocytosis 4 protein-coding chr1-13516 chr1 5876931 5877141 + 6.83 0.000 intron (NR_111987, intron 21 of 32) intron (NR_111987, intron 21 of 32) -14295 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr8-3383 chr8 58341864 58342074 + 6.83 0.000 Intergenic L1M4a2|LINE|L1 -69295 NM_001330535 137886 Hs.155572 NM_001077619 ENSG00000215114 UBXN2B p37 UBX domain protein 2B protein-coding chr13-2355 chr13 36794745 36794955 + 6.83 0.000 Intergenic Intergenic -24352 NM_000538 5994 Hs.24422 NM_000538 ENSG00000133111 RFXAP - regulatory factor X associated protein protein-coding chr3-10115 chr3 112765528 112765738 + 6.83 0.000 Intergenic Intergenic -16314 NR_110017 101929694 Hs.385630 NR_110017 ENSG00000240893 LINC02042 - long intergenic non-protein coding RNA 2042 ncRNA chr3-5986 chr3 47864705 47864915 + 6.83 0.000 intron (NM_002375, intron 15 of 18) AluSx1|SINE|Alu 15255 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr15-1427 chr15 64720594 64720804 + 6.83 0.000 Intergenic AluYh3a3|SINE|Alu -17418 NM_002537 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr2-14581 chr2 231946596 231946806 + 6.83 0.000 Intergenic Intergenic -14882 NM_001257282 129563 Hs.732236 NM_152383 ENSG00000144535 DIS3L2 FAM6A|PRLMNS|hDIS3L2 DIS3 like 3'-5' exoribonuclease 2 protein-coding chr6-5520 chr6 166761462 166761672 + 6.83 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 100958 NM_001318937 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr11-8939 chr11 17992896 17993106 + 6.83 0.000 intron (NR_104040, intron 6 of 11) intron (NR_104040, intron 6 of 11) 20046 NM_012139 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr15-2974 chr15 51031117 51031327 + 6.83 0.000 Intergenic L1M1|LINE|L1 -6266 NR_146310 109729174 NR_146310 ENSG00000259240 MIR4713HG - MIR4713 host gene ncRNA chr9-3854 chr9 130980736 130980946 + 6.83 0.000 Intergenic Intergenic -28333 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr8-4390 chr8 103740079 103740289 + 6.83 0.000 intron (NM_001348496, intron 3 of 23) intron (NM_001348496, intron 3 of 23) -79036 NM_001348501 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr18-2849 chr18 8261944 8262154 + 6.83 0.000 intron (NM_002845, intron 17 of 30) intron (NM_002845, intron 17 of 30) 104985 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr20-3780 chr20 21137455 21137665 + 6.83 0.000 intron (NM_018474, intron 3 of 12) L1MC5a|LINE|L1 11478 NM_001163022 55857 Hs.187635 NM_018474 ENSG00000088970 KIZ C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69 kizuna centrosomal protein protein-coding chr20-3867 chr20 28805418 28805628 + 6.83 0.000 Intergenic ALR/Alpha|Satellite|centr -202858 NR_132315 100289097 Hs.529357 NR_132315 ENSG00000282826 FRG1CP - FSHD region gene 1 family member C, pseudogene pseudo chr8-6626 chr8 77250177 77250387 + 6.83 0.000 Intergenic MLT2B5|LTR|ERVL -200415 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr12-8313 chr12 129182354 129182564 + 6.83 0.000 intron (NM_133448, intron 5 of 8) MLT2D|LTR|ERVL -26142 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chr5-3071 chr5 35009185 35009395 + 6.83 0.000 intron (NM_031900, intron 12 of 13) intron (NM_031900, intron 12 of 13) 38659 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr12-3896 chr12 121702003 121702213 + 6.83 0.000 Intergenic AluJo|SINE|Alu -10644 NM_001080825 144404 Hs.644504 NM_001080825 ENSG00000188735 TMEM120B - transmembrane protein 120B protein-coding chr7-9185 chr7 115711532 115711742 + 6.83 0.000 Intergenic L1PA7|LINE|L1 -130196 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr14-3915 chr14 101067734 101067944 + 6.83 0.000 Intergenic Intergenic 1115 NR_030392 724026 NR_030392 ENSG00000207959 MIR656 MIRN656|hsa-mir-656|mir-656 microRNA 656 ncRNA chr3-9928 chr3 87950732 87950942 + 6.83 0.000 intron (NM_001322210, intron 2 of 2) MER65D|LTR|ERV1 -31739 NM_000866 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr6-3537 chr6 39204509 39204719 + 6.83 0.000 intron (NM_003740, intron 1 of 4) MER5B|DNA|hAT-Charlie 24861 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding chr19-5131 chr19 1557579 1557789 + 6.83 0.000 intron (NM_203304, intron 1 of 1) AluSx3|SINE|Alu 10374 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr8-6318 chr8 46979356 46979566 + 6.83 0.000 Intergenic Intergenic 138575 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr8-3591 chr8 137877634 137877844 + 6.83 0.000 intron (NR_161374, intron 2 of 7) AluSg|SINE|Alu 205806 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chr20-2613 chr20 40534314 40534524 + 6.83 0.000 Intergenic L2a|LINE|L2 154817 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr3-10871 chr3 169319469 169319679 + 6.83 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -128293 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr1-16019 chr1 199898594 199898804 + 6.83 0.000 Intergenic Intergenic -129011 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr15-5109 chr15 89278427 89278637 + 6.83 0.000 intron (NM_001113378, intron 13 of 37) intron (NM_001113378, intron 13 of 37) 34553 NM_018193 55215 Hs.513126 NM_018193 ENSG00000140525 FANCI KIAA1794 FA complementation group I protein-coding chr5-5191 chr5 112196707 112196917 + 6.83 0.000 intron (NM_001347887, intron 15 of 23) L2b|LINE|L2 -31471 NR_110559 101927023 Hs.571002 NR_110559 ENSG00000251076 LOC101927023 - uncharacterized LOC101927023 ncRNA chr21-956 chr21 44266108 44266318 + 6.83 0.000 Intergenic Intergenic -3997 NM_175867 29947 Hs.592165 NM_013369 ENSG00000142182 DNMT3L - DNA methyltransferase 3 like protein-coding chr17-7679 chr17 30947525 30947735 + 6.83 0.000 intron (NR_144488, intron 5 of 9) AluSx|SINE|Alu -23409 NM_001184992 84282 Hs.29874 NM_032322 ENSG00000181481 RNF135 L13|MMFD|REUL|Riplet ring finger protein 135 protein-coding chr10-5600 chr10 93505437 93505647 + 6.83 0.000 intron (NM_018131, intron 3 of 8) MLT1J2|LTR|ERVL-MaLR 8930 NM_018131 55165 Hs.14559 NM_018131 ENSG00000138180 CEP55 C10orf3|CT111|MARCH|URCC6 centrosomal protein 55 protein-coding chr17-4438 chr17 44291756 44291966 + 6.83 0.000 Intergenic L1MB7|LINE|L1 16570 NR_110802 101926996 Hs.666688 NR_110802 RUNDC3A-AS1 - RUNDC3A antisense RNA 1 ncRNA chr11-10263 chr11 102522923 102523133 + 6.83 0.000 intron (NM_002423, intron 5 of 5) intron (NM_002423, intron 5 of 5) 7719 NM_002423 4316 Hs.2256 NM_002423 ENSG00000137673 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 protein-coding chr12-3107 chr12 25014952 25015162 + 6.83 0.000 intron (NM_001321724, intron 4 of 17) intron (NM_001321724, intron 4 of 17) 17482 NM_001321724 645177 Hs.569157 NM_001321724 LOC645177 - uncharacterized LOC645177 protein-coding chr1-13972 chr1 24971322 24971532 + 6.83 0.000 Intergenic Intergenic -6417 NM_001031680 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr12-4747 chr12 52098811 52099021 + 6.83 0.000 intron (NR_120440, intron 1 of 1) SATR2|Satellite|Satellite 5347 NR_120440 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr15-3908 chr15 26153597 26153807 + 6.83 0.000 Intergenic L1PA10|LINE|L1 37889 NR_038851 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr10-3902 chr10 68295565 68295775 + 6.83 0.000 intron (NM_001033083, intron 4 of 8) AluSx1|SINE|Alu -36023 NM_001322438 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding chr6-8003 chr6 116765618 116765828 + 6.83 0.000 promoter-TSS (NM_001085480) promoter-TSS (NM_001085480) -4 NM_001085480 221303 Hs.126712 NM_001085480 ENSG00000183807 FAM162B C6orf189|bA86F4.2 family with sequence similarity 162 member B protein-coding chr6-7950 chr6 111568520 111568730 + 6.83 0.000 intron (NM_147686, intron 5 of 8) intron (NM_147686, intron 5 of 8) -1346 NM_001164283 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr10-5874 chr10 115690161 115690371 + 6.83 0.000 intron (NM_207303, intron 26 of 28) MER1B|DNA|hAT-Charlie 504523 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr1-11213 chr1 244723594 244723804 + 6.83 0.000 Intergenic MIR|SINE|MIR 70573 NM_001297746 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chrX-4787 chrX 98160177 98160387 + 6.83 0.000 Intergenic L1M1|LINE|L1 -595747 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr10-6021 chr10 125738643 125738853 + 6.83 0.000 intron (NR_110859, intron 15 of 25) MIR|SINE|MIR 13312 NR_120633 101927983 Hs.634269 NR_120633 ENSG00000236991 EDRF1-AS1 - EDRF1 antisense RNA 1 ncRNA chr5-6050 chr5 176605678 176605888 + 6.83 0.000 intron (NM_052899, intron 1 of 1) AluJr4|SINE|Alu 4373 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr2-8704 chr2 153084852 153085062 + 6.83 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 366320 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr14-3446 chr14 99732033 99732243 + 6.83 0.000 Intergenic Intergenic 47840 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr1-15822 chr1 179023997 179024207 + 6.83 0.000 Intergenic L3b|LINE|CR1 -1702 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr1-10187 chr1 111603963 111604173 + 6.83 0.000 intron (NR_034126, intron 3 of 4) intron (NR_034126, intron 3 of 4) 4250 NR_034126 100129269 Hs.689728 NR_034126 LINC01160 - long intergenic non-protein coding RNA 1160 ncRNA chr6-6515 chr6 125002156 125002366 + 6.83 0.000 intron (NR_104440, intron 2 of 6) intron (NR_104440, intron 2 of 6) 18893 NM_152553 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr4-7314 chr4 54927010 54927220 + 6.83 0.000 Intergenic Intergenic 198480 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chrX-5103 chrX 128112079 128112289 + 6.83 0.000 Intergenic L1PA15|LINE|L1 -59781 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr3-8751 chr3 1889702 1889912 + 6.83 0.000 Intergenic HERVIP10F-int|LTR|ERV1 -208996 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr3-5609 chr3 9558092 9558302 + 6.83 0.000 Intergenic MIR|SINE|MIR -4375 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr14-3893 chr14 96468826 96469036 + 6.83 0.000 intron (NM_001350892, intron 12 of 15) intron (NM_001350892, intron 12 of 15) 33395 NR_122121 730202 Hs.647565 NR_122121 LOC730202 - uncharacterized LOC730202 ncRNA chr7-9363 chr7 129795407 129795617 + 6.83 0.000 Intergenic Intergenic -20498 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr11-5000 chr11 74560910 74561120 + 6.83 0.000 Intergenic L1ME3A|LINE|L1 -31567 NR_046409 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr9-6500 chr9 99401974 99402184 + 6.83 0.000 Intergenic Intergenic -26822 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr2-13301 chr2 129720575 129720785 + 6.83 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 156811 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr7-4489 chr7 147940300 147940510 + 6.83 0.000 intron (NM_014141, intron 13 of 22) intron (NM_014141, intron 13 of 22) 268726 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr18-2346 chr18 29154471 29154681 + 6.83 0.000 Intergenic Intergenic -977446 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-8588 chr2 138353692 138353902 + 6.83 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -147973 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr12-6763 chr12 7373239 7373449 + 6.83 0.000 exon (NM_174941, exon 14 of 20) exon (NM_174941, exon 14 of 20) 69012 NM_001080454 341392 Hs.450804 NM_001080454 ENSG00000215009 ACSM4 - acyl-CoA synthetase medium chain family member 4 protein-coding chr9-8643 chr9 129422621 129422831 + 6.83 0.000 Intergenic MIRb|SINE|MIR -65934 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr2-13241 chr2 125524163 125524373 + 6.83 0.000 Intergenic MER8|DNA|TcMar-Tigger 593717 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr17-8176 chr17 61588221 61588431 + 6.83 0.000 Intergenic MIRb|SINE|MIR 2893 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr8-3356 chr8 43039527 43039737 + 6.83 0.000 Intergenic AluSx1|SINE|Alu -16667 NR_033698 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr6-5530 chr6 167470492 167470702 + 6.83 0.000 intron (NR_134591, intron 1 of 3) intron (NR_134591, intron 1 of 3) 2193 NR_134591 105378127 Hs.58456 NR_134591 LOC105378127 - uncharacterized LOC105378127 ncRNA chr1-14772 chr1 68864525 68864735 + 6.83 0.000 Intergenic LTR1A1|LTR|ERV1 -191268 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr13-3812 chr13 46387204 46387414 + 6.83 0.000 promoter-TSS (NM_001286763) promoter-TSS (NM_001286763) -57 NM_001286762 80183 Hs.98117 NM_025113 ENSG00000102445 RUBCNL C13orf18|KIAA0226L|PACER rubicon like autophagy enhancer protein-coding chr15-5092 chr15 88318145 88318355 + 6.83 0.000 Intergenic L2b|LINE|L2 -61511 NM_002530 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr16-5716 chr16 82572752 82572962 + 6.83 0.000 Intergenic L1MC3|LINE|L1 -54112 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr4-6721 chr4 4083458 4083668 + 6.83 0.000 Intergenic Intergenic -128135 NR_130740 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr15-3648 chr15 86230170 86230380 + 6.83 0.000 intron (NM_152336, intron 6 of 24) intron (NM_152336, intron 6 of 24) 86693 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr12-4524 chr12 24944025 24944235 + 6.83 0.000 intron (NM_001178091, intron 1 of 9) intron (NM_001178091, intron 1 of 9) 4971 NM_001178091 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr20-3554 chr20 2729691 2729901 + 6.83 0.000 intron (NM_001110514, intron 7 of 17) intron (NM_001110514, intron 7 of 17) 36918 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr2-8822 chr2 170256177 170256387 + 6.83 0.000 intron (NM_001083615, intron 7 of 33) L1PA16|LINE|L1 78135 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr4-4461 chr4 54873042 54873252 + 6.83 0.000 Intergenic Intergenic 215219 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr2-6268 chr2 46712200 46712410 + 6.83 0.000 intron (NM_144949, intron 1 of 1) L1ME2|LINE|L1 13010 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr4-8538 chr4 164068581 164068791 + 6.83 0.000 intron (NM_001166373, intron 2 of 7) LTR12C|LTR|ERV1 129025 NM_012403 23520 Hs.661161 NM_012403 ANP32C PP32R1 acidic nuclear phosphoprotein 32 family member C protein-coding chr18-3083 chr18 33670268 33670478 + 6.83 0.000 intron (NM_030632, intron 5 of 11) intron (NM_030632, intron 5 of 11) 92154 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr20-4379 chr20 57410614 57410824 + 6.83 0.000 Intergenic Intergenic -17663 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA chr15-4721 chr15 67571166 67571376 + 6.83 0.000 intron (NM_001206804, intron 3 of 21) Charlie4z|DNA|hAT-Charlie 22177 NM_001206804 5607 Hs.114198 NM_002757 ENSG00000137764 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding chr3-5851 chr3 33107554 33107764 + 6.83 0.000 Intergenic Intergenic -6299 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr3-7395 chr3 88334409 88334619 + 6.83 0.000 Intergenic L1MEf|LINE|L1 -3942 NM_001368165 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr1-12912 chr1 114892123 114892333 + 6.83 0.000 intron (NM_001282542, intron 15 of 30) L1M2|LINE|L1 37365 NR_104211 6847 Hs.112743 NM_003176 ENSG00000198765 SYCP1 CT8|HOM-TES-14|SCP-1|SCP1 synaptonemal complex protein 1 protein-coding chr7-9443 chr7 134363917 134364127 + 6.83 0.000 Intergenic LTR33|LTR|ERVL -47092 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr5-2560 chr5 180209225 180209435 + 6.83 0.000 promoter-TSS (NM_175062) promoter-TSS (NM_175062) -119 NM_175062 255426 Hs.190559 NM_175062 ENSG00000146090 RASGEF1C - RasGEF domain family member 1C protein-coding chr17-8112 chr17 57289582 57289792 + 6.83 0.000 intron (NM_001322250, intron 5 of 13) intron (NM_001322250, intron 5 of 13) 32668 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr5-6721 chr5 72394798 72395008 + 6.83 0.000 Intergenic Intergenic 74530 NM_001284403 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr12-8196 chr12 122928641 122928851 + 6.83 0.000 TTS (NM_019625) TTS (NM_019625) -32622 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr3-8672 chr3 180695130 180695340 + 6.83 0.000 Intergenic Intergenic -15746 NM_181426 339829 Hs.712820 NM_181426 ENSG00000284862 CCDC39 CILD14|FAP59 coiled-coil domain containing 39 protein-coding chr20-3298 chr20 10877398 10877608 + 6.83 0.000 intron (NR_109866, intron 6 of 6) LTR16A1|LTR|ERVL 31769 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA chr17-6868 chr17 28182189 28182399 + 6.83 0.000 intron (NM_016231, intron 7 of 10) (TGTT)n|Simple_repeat|Simple_repeat -44269 NR_003064 23615 Hs.157195 NM_021093 ENSG00000237575 PYY2 - peptide YY 2 (pseudogene) pseudo chr11-10209 chr11 97358436 97358646 + 6.83 0.000 Intergenic Intergenic 850116 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr3-10074 chr3 108334997 108335207 + 6.83 0.000 intron (NM_001370244, intron 2 of 9) intron (NM_001370244, intron 2 of 9) 23317 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr2-9309 chr2 223727457 223727667 + 6.83 0.000 Intergenic Intergenic 110020 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr6-7023 chr6 23748161 23748371 + 6.83 0.000 Intergenic L1PA8|LINE|L1 -377949 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr16-4656 chr16 75456475 75456685 + 6.83 0.000 intron (NM_001304998, intron 1 of 2) intron (NM_001304998, intron 1 of 2) 7863 NM_001304997 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding chr7-8878 chr7 91155028 91155238 + 6.83 0.000 intron (NM_012395, intron 13 of 13) intron (NM_012395, intron 13 of 13) -109300 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chrX-4214 chrX 37473443 37473653 + 6.83 0.000 Intergenic LTR56|LTR|ERV1 -98113 NM_198511 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chr10-2971 chr10 71379856 71380066 + 6.83 0.000 Intergenic Intergenic -16959 NM_052836 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr11-7420 chr11 103484011 103484221 + 6.83 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -365790 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr11-10075 chr11 85114098 85114308 + 6.83 0.000 intron (NM_001142699, intron 5 of 27) intron (NM_001142699, intron 5 of 27) -190782 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-6900 chr12 23184085 23184295 + 6.83 0.000 intron (NR_120471, intron 1 of 4) L2a|LINE|L2 8554 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr9-8758 chr9 133515268 133515478 + 6.83 0.000 intron (NM_001080483, intron 4 of 4) intron (NM_001080483, intron 4 of 4) 9586 NM_001080483 389827 NM_001080483 ENSG00000187616 MYMK MYOMAKER|TMEM226|TMEM8C myomaker, myoblast fusion factor protein-coding chr1-13266 chr1 226526914 226527124 + 6.83 0.000 Intergenic Intergenic -21745 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr17-7963 chr17 47961611 47961821 + 6.83 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -3833 NM_024320 79170 Hs.368260 NM_024320 ENSG00000167183 PRR15L ATAD4 proline rich 15 like protein-coding chr16-2561 chr16 68700243 68700453 + 6.83 0.000 TTS (NM_001317196) TTS (NM_001317196) -36944 NM_001317185 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr2-6523 chr2 201005981 201006191 + 6.83 0.000 intron (NM_001321619, intron 7 of 11) AluSg|SINE|Alu -42426 NR_033915 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr13-3668 chr13 33701665 33701875 + 6.83 0.000 Intergenic Intergenic -24976 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr2-12460 chr2 59990404 59990614 + 6.83 0.000 Intergenic Intergenic 392527 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr6-6345 chr6 56046648 56046858 + 6.83 0.000 Intergenic Intergenic 44909 NM_001318753 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr2-8823 chr2 170593376 170593586 + 6.83 0.000 intron (NM_001083615, intron 31 of 33) intron (NM_001083615, intron 31 of 33) 121086 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr15-1361 chr15 73322672 73322882 + 6.83 0.000 exon (NM_005477, exon 8 of 8) exon (NM_005477, exon 8 of 8) 22867 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr9-7051 chr9 123859777 123859987 + 6.83 0.000 intron (NM_001352968, intron 2 of 18) L2|LINE|L2 70244 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr2-10680 chr2 24415617 24415827 + 6.83 0.000 Intergenic AluSq2|SINE|Alu -55186 NM_001348184 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr5-9025 chr5 168030518 168030728 + 6.83 0.000 intron (NM_001080428, intron 3 of 24) L2b|LINE|L2 -135222 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr18-2701 chr18 61350115 61350325 + 6.83 0.000 intron (NM_031891, intron 1 of 11) intron (NM_031891, intron 1 of 11) 16790 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr7-5212 chr7 12795225 12795435 + 6.83 0.000 Intergenic MER5A|DNA|hAT-Charlie 107697 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr9-8576 chr9 127749232 127749442 + 6.83 0.000 exon (NM_170600, exon 5 of 12) exon (NM_170600, exon 5 of 12) 5945 NM_001142534 10044 Hs.306412 NM_005489 ENSG00000095370 SH2D3C CHAT|NSP3|PRO34088|SHEP1 SH2 domain containing 3C protein-coding chr1-13815 chr1 19248035 19248245 + 6.83 0.000 intron (NM_001271428, intron 1 of 22) Tigger3b|DNA|TcMar-Tigger 3384 NM_001271427 23065 Hs.439200 NM_015047 ENSG00000127463 EMC1 CAVIPMR|KIAA0090 ER membrane protein complex subunit 1 protein-coding chr6-7539 chr6 69306806 69307016 + 6.83 0.000 intron (NM_001704, intron 20 of 31) intron (NM_001704, intron 20 of 31) 489555 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr1-7886 chr1 117984372 117984582 + 6.83 0.000 intron (NM_206996, intron 41 of 48) intron (NM_206996, intron 41 of 48) 54738 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding chr2-7250 chr2 229407206 229407416 + 6.83 0.000 exon (NM_139072, exon 10 of 13) exon (NM_139072, exon 10 of 13) -136024 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr6-5840 chr6 34890075 34890285 + 6.83 0.000 intron (NM_015245, intron 1 of 23) AluSx1|SINE|Alu 925 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr3-9242 chr3 38653905 38654115 + 6.83 0.000 Intergenic HAL1|LINE|L1 -4323 NM_001354701 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr13-4299 chr13 99689046 99689256 + 6.83 0.000 TTS (NR_046526) TTS (NR_046526) 1820 NR_046526 100874063 Hs.577064 NR_046526 ENSG00000227659 CLYBL-AS2 - CLYBL antisense RNA 2 ncRNA chr1-11556 chr1 182486230 182486440 + 6.83 0.000 intron (NM_001366934, intron 7 of 22) AluSz|SINE|Alu 36189 NM_001137669 353299 Hs.121200 NM_032267 ENSG00000121446 RGSL1 RGSL|RGSL2 regulator of G protein signaling like 1 protein-coding chr3-5570 chr3 5775378 5775588 + 6.83 0.000 Intergenic L1PA6|LINE|L1 -525228 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr1-15990 chr1 196288638 196288848 + 6.83 0.000 intron (NM_001287820, intron 20 of 26) L2c|LINE|L2 -200028 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr2-7630 chr2 27124248 27124458 + 6.83 0.000 intron (NM_032604, intron 1 of 8) intron (NM_032604, intron 1 of 8) 538 NM_032604 84696 Hs.375791 NM_032604 ENSG00000143994 ABHD1 LABH1 abhydrolase domain containing 1 protein-coding chr6-7768 chr6 95422449 95422659 + 6.83 0.000 Intergenic Intergenic 154897 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr5-4735 chr5 44057142 44057352 + 6.83 0.000 Intergenic Intergenic -331485 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr17-7711 chr17 32494544 32494754 + 6.83 0.000 3' UTR (NM_015194, exon 22 of 22) 3' UTR (NM_015194, exon 22 of 22) 7656 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr15-4198 chr15 24981477 24981687 + 6.83 0.000 promoter-TSS (NR_001293) promoter-TSS (NR_001293) -412 NR_001293 91380 NR_001293 ENSG00000276314 SNORD107 HBII-436 small nucleolar RNA, C/D box 107 snoRNA chr20-4377 chr20 57143327 57143537 + 6.83 0.000 Intergenic Intergenic -70264 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr4-8332 chr4 145935415 145935625 + 6.83 0.000 intron (NM_178835, intron 1 of 14) intron (NM_178835, intron 1 of 14) 3303 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr3-10830 chr3 164209571 164209781 + 6.83 0.000 Intergenic L1M3f|LINE|L1 -38120 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr3-8521 chr3 137864915 137865125 + 6.83 0.000 Intergenic Intergenic 93109 NR_109987 100507274 Hs.360349 NR_109987 ENSG00000239513 LINC01210 - long intergenic non-protein coding RNA 1210 ncRNA chr13-3898 chr13 53757339 53757549 + 6.83 0.000 Intergenic Intergenic -57975 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr21-935 chr21 40242464 40242674 + 6.83 0.000 intron (NR_073202, intron 11 of 32) intron (NR_073202, intron 11 of 32) -30138 NR_039917 100616148 NR_039917 ENSG00000263973 MIR4760 - microRNA 4760 ncRNA chr3-7215 chr3 192772477 192772687 + 6.83 0.000 Intergenic Intergenic -45041 NM_004113 2257 Hs.390250 NM_004113 ENSG00000114279 FGF12 EIEE47|FGF12B|FHF1 fibroblast growth factor 12 protein-coding chr20-3547 chr20 1965857 1966067 + 6.83 0.000 non-coding (NR_134520, exon 3 of 4) non-coding (NR_134520, exon 3 of 4) 18752 NR_134520 727993 Hs.551466 NR_134520 ENSG00000233896 PDYN-AS1 - PDYN antisense RNA 1 ncRNA chr6-3156 chr6 113858922 113859132 + 6.83 0.000 intron (NM_002356, intron 1 of 1) CpG 1682 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding chr13-3854 chr13 50171695 50171905 + 6.83 0.000 promoter-TSS (NR_002183) promoter-TSS (NR_002183) -218 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr1-12496 chr1 20603970 20604180 + 6.83 0.000 intron (NM_001785, intron 1 of 3) (TTGTTAG)n|Simple_repeat|Simple_repeat 14978 NM_001785 978 Hs.466910 NM_001785 ENSG00000158825 CDA CDD cytidine deaminase protein-coding chr12-4981 chr12 77583739 77583949 + 6.83 0.000 Intergenic L2c|LINE|L2 -247050 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr3-10967 chr3 177333827 177334037 + 6.83 0.000 Intergenic Intergenic 39490 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr2-13507 chr2 150389628 150389838 + 6.83 0.000 Intergenic Intergenic 97962 NM_005168 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr2-10876 chr2 65453911 65454121 + 6.83 0.000 Intergenic AluJb|SINE|Alu -21417 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr17-5869 chr17 68319257 68319467 + 6.83 0.000 intron (NM_001352899, intron 2 of 12) intron (NM_001352899, intron 2 of 12) 27227 NM_001352901 22901 Hs.437249 NM_014960 ENSG00000141337 ARSG USH4 arylsulfatase G protein-coding chr2-14258 chr2 213870815 213871025 + 6.83 0.000 intron (NR_047660, intron 10 of 14) L2c|LINE|L2 112853 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr2-12947 chr2 102550322 102550532 + 6.83 0.000 Intergenic ERVL-E-int|LTR|ERVL -69126 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr2-14365 chr2 218981072 218981282 + 6.83 0.000 TTS (NM_017521) TTS (NM_017521) 4480 NM_017521 54738 Hs.234759 NM_017521 ENSG00000163497 FEV HSRNAFEV|PET-1 FEV transcription factor, ETS family member protein-coding chr3-10208 chr3 121078485 121078695 + 6.83 0.000 intron (NR_145517, intron 5 of 8) LTR12C|LTR|ERV1 28950 NR_049861 100847043 NR_049861 ENSG00000264477 MIR5682 - microRNA 5682 ncRNA chr7-7412 chr7 74334134 74334344 + 6.83 0.000 intron (NM_032421, intron 2 of 15) intron (NM_032421, intron 2 of 15) 44764 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr16-6490 chr16 58663810 58664020 + 6.83 0.000 Intergenic Intergenic 20416 NM_001369611 55238 Hs.10499 NM_018231 ENSG00000103042 SLC38A7 SNAT7 solute carrier family 38 member 7 protein-coding chr4-6191 chr4 47830539 47830749 + 6.83 0.000 promoter-TSS (NR_125880) promoter-TSS (NR_125880) -701 NR_125881 101927179 Hs.570822 NR_125880 LOC101927179 - uncharacterized LOC101927179 ncRNA chr14-1881 chr14 89900014 89900224 + 6.83 0.000 intron (NM_001284269, intron 5 of 5) L1ME3Cz|LINE|L1 54417 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr17-5567 chr17 44998439 44998649 + 6.83 0.000 Intergenic Intergenic -30241 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr7-6416 chr7 155948595 155948805 + 6.83 0.000 Intergenic Intergenic -12519 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr9-2265 chr9 100473383 100473593 + 6.83 0.000 5' UTR (NM_003692, exon 1 of 10) 5' UTR (NM_003692, exon 1 of 10) 339 NM_003692 8577 Hs.598100 NM_003692 ENSG00000241697 TMEFF1 C9orf2|CT120.1|H7365|TR-1 transmembrane protein with EGF like and two follistatin like domains 1 protein-coding chr5-4241 chr5 135123912 135124122 + 6.83 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -83970 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr13-1002 chr13 113435874 113436084 + 6.83 0.000 intron (NM_199162, intron 2 of 6) intron (NM_199162, intron 2 of 6) 13179 NM_199162 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding chr3-9864 chr3 80680079 80680289 + 6.83 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -84713 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr14-4899 chr14 72550476 72550686 + 6.83 0.000 intron (NM_001370277, intron 19 of 19) intron (NM_001370277, intron 19 of 19) 33761 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr22-2256 chr22 29713051 29713261 + 6.83 0.000 Intergenic Intergenic -6847 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr4-4549 chr4 72080868 72081078 + 6.83 0.000 intron (NM_001144756, intron 2 of 4) LTR33C|LTR|ERVL 41841 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr7-8958 chr7 98565475 98565685 + 6.83 0.000 Intergenic Intergenic -51705 NM_002523 4885 Hs.3281 NM_002523 ENSG00000106236 NPTX2 NARP|NP-II|NP2 neuronal pentraxin 2 protein-coding chr17-8191 chr17 62509911 62510121 + 6.83 0.000 intron (NM_001330418, intron 3 of 21) AluJb|SINE|Alu 28903 NM_001284363 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr5-5279 chr5 123168673 123168883 + 6.83 0.000 intron (NM_001136239, intron 5 of 7) intron (NM_001136239, intron 5 of 7) -78462 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr17-6646 chr17 67507195 67507405 + 6.83 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -35715 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr15-4727 chr15 67871269 67871479 + 6.83 0.000 Intergenic L1MC|LINE|L1 -31329 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chrX-2574 chrX 103350612 103350822 + 6.83 0.000 Intergenic Intergenic -5789 NM_016303 51186 Hs.533287 NM_016303 ENSG00000185222 TCEAL9 WBP5|WEX6 transcription elongation factor A like 9 protein-coding chr10-5054 chr10 37276615 37276825 + 6.83 0.000 Intergenic HERV9-int|LTR|ERV1 -32466 NR_104061 101929520 Hs.144151 NR_104061 ENSG00000235687 LINC00993 - long intergenic non-protein coding RNA 993 ncRNA chr2-11304 chr2 191134130 191134340 + 6.83 0.000 intron (NM_003151, intron 3 of 23) L1PB2|LINE|L1 16759 NM_003151 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr9-7798 chr9 80061084 80061294 + 6.83 0.000 Intergenic Intergenic 86166 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr5-5009 chr5 82856700 82856910 + 6.83 0.000 intron (NR_105016, intron 1 of 3) intron (NR_105016, intron 1 of 3) 3031 NR_105016 102546175 NR_105016 ENSG00000281327 LINC01338 - long intergenic non-protein coding RNA 1338 ncRNA chr19-4812 chr19 35284711 35284921 + 6.83 0.000 exon (NM_021175, exon 2 of 3) exon (NM_021175, exon 2 of 3) 2288 NM_021175 57817 Hs.8821 NM_021175 ENSG00000105697 HAMP HEPC|HFE2B|LEAP1|PLTR hepcidin antimicrobial peptide protein-coding chr8-5268 chr8 136723429 136723639 + 6.83 0.000 intron (NR_147196, intron 2 of 5) intron (NR_147196, intron 2 of 5) 192736 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr7-8110 chr7 26332031 26332241 + 6.83 0.000 intron (NM_001318199, intron 1 of 6) L1MB8|LINE|L1 -28748 NM_001199837 29887 Hs.741316 NM_013322 ENSG00000086300 SNX10 OPTB8 sorting nexin 10 protein-coding chr16-4034 chr16 1061877 1062087 + 6.83 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -10774 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr1-11019 chr1 220805104 220805314 + 6.83 0.000 exon (NM_022746, exon 6 of 7) exon (NM_022746, exon 6 of 7) 18296 NM_022746 64757 Hs.497816 NM_022746 ENSG00000186205 MARC1 MOSC1 mitochondrial amidoxime reducing component 1 protein-coding chr7-6933 chr7 82933545 82933755 + 6.83 0.000 intron (NM_033026, intron 6 of 24) MamRep4096|DNA|hAT-Tip100 229234 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr3-9720 chr3 66906149 66906359 + 6.83 0.000 Intergenic L2c|LINE|L2 -92053 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr1-15769 chr1 174530314 174530524 + 6.83 0.000 intron (NM_001366446, intron 13 of 25) L1MA4A|LINE|L1 82455 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr8-6997 chr8 108691490 108691700 + 6.83 0.000 intron (NR_136411, intron 1 of 3) intron (NR_136411, intron 1 of 3) 95999 NM_153015 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr1-11555 chr1 181097260 181097470 + 6.83 0.000 Intergenic Intergenic 8665 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr16-4569 chr16 67086895 67087105 + 6.83 0.000 intron (NM_001755, intron 5 of 5) L2c|LINE|L2 -22941 NM_001320540 80262 Hs.513666 NM_025187 ENSG00000125149 C16orf70 C16orf6|LIN10|lin-10 chromosome 16 open reading frame 70 protein-coding chr1-15291 chr1 116521240 116521450 + 6.83 0.000 intron (NR_026665, intron 4 of 5) intron (NR_026665, intron 4 of 5) 38766 NR_039621 100616384 NR_039621 ENSG00000264419 MIR548AC - microRNA 548ac ncRNA chr8-3380 chr8 57463415 57463625 + 6.83 0.000 Intergenic Harlequin-int|LTR|ERV1 119733 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr3-9787 chr3 71877499 71877709 + 6.83 0.000 Intergenic Intergenic -92456 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr15-3528 chr15 100249513 100249723 + 6.83 0.000 intron (NM_139057, intron 7 of 21) intron (NM_139057, intron 7 of 21) 92357 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 WMS4 ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding chr20-2318 chr20 8722342 8722552 + 6.83 0.000 intron (NM_182734, intron 15 of 32) intron (NM_182734, intron 15 of 32) -108738 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr2-9842 chr2 165640449 165640659 + 6.83 0.000 intron (NM_024969, intron 2 of 4) intron (NM_024969, intron 2 of 4) 68218 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr15-1789 chr15 78945823 78946033 + 6.83 0.000 promoter-TSS (NM_004390) promoter-TSS (NM_004390) -830 NM_001319137 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr1-16158 chr1 205916532 205916742 + 6.83 0.000 intron (NM_052934, intron 20 of 20) MIRc|SINE|MIR -18276 NR_110984 103021296 Hs.613648 NR_110983 SLC26A9-AS1 - SLC26A9 and RAB7B antisense RNA 1 ncRNA chr19-5027 chr19 48371446 48371656 + 6.83 0.000 intron (NM_012451, intron 2 of 4) MIR|SINE|MIR 7184 NM_012451 23546 Hs.408333 NM_012451 ENSG00000105467 SYNGR4 - synaptogyrin 4 protein-coding chr11-5491 chr11 79507050 79507260 + 6.83 0.000 Intergenic LTR21A|LTR|ERV1 -66125 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr16-5223 chr16 28061091 28061301 + 6.83 0.000 intron (NM_001109763, intron 1 of 6) intron (NM_001109763, intron 1 of 6) 2518 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr1-12364 chr1 3342776 3342986 + 6.83 0.000 intron (NM_022114, intron 3 of 16) L1ME2|LINE|L1 -111784 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr2-9837 chr2 161077997 161078207 + 6.83 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -58853 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr14-3587 chr14 30559945 30560155 + 6.83 0.000 intron (NM_001308097, intron 1 of 13) intron (NM_001308097, intron 1 of 13) 892 NM_017769 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr11-3660 chr11 117679416 117679626 + 6.83 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 117695 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr12-6953 chr12 26882213 26882423 + 6.83 0.000 Intergenic Intergenic -49124 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr5-8292 chr5 114030180 114030390 + 6.83 0.000 Intergenic ERVL-E-int|LTR|ERVL -331785 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr20-4323 chr20 52773538 52773748 + 6.83 0.000 Intergenic AluJb|SINE|Alu 152805 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA chr20-4254 chr20 49101053 49101263 + 6.83 0.000 Intergenic Intergenic 54846 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr6-7207 chr6 39612102 39612312 + 6.83 0.000 intron (NM_001289020, intron 6 of 21) intron (NM_001289020, intron 6 of 21) 113201 NM_001289020 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr4-8161 chr4 129232138 129232348 + 6.83 0.000 Intergenic Intergenic 136091 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chrX-2823 chrX 136074809 136075019 + 6.83 0.000 Intergenic Intergenic -71788 NR_027621 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr12-5872 chr12 50695332 50695542 + 6.83 0.000 intron (NM_173602, intron 15 of 37) intron (NM_173602, intron 15 of 37) -68664 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr15-2345 chr15 34520629 34520839 + 6.83 0.000 Intergenic Intergenic 7637 NR_036261 100422845 NR_036261 ENSG00000221065 MIR1233-2 - microRNA 1233-2 ncRNA chr11-2277 chr11 1291557 1291767 + 6.83 0.000 intron (NM_001318512, intron 1 of 4) CpG 11128 NM_001318514 54472 Hs.368527 NM_019009 ENSG00000078902 TOLLIP IL-1RAcPIP toll interacting protein protein-coding chr2-10521 chr2 231567615 231567825 + 6.83 0.000 Intergenic MER103C|DNA|hAT-Charlie -25144 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr12-6048 chr12 112178990 112179200 + 6.83 0.000 intron (NM_001109662, intron 63 of 75) intron (NM_001109662, intron 63 of 75) -15774 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr11-5793 chr11 5887384 5887594 + 6.83 0.000 Intergenic Intergenic 3196 NM_001005165 390081 Hs.553739 NM_001005165 ENSG00000180974 OR52E4 OR11-55 olfactory receptor family 52 subfamily E member 4 protein-coding chr9-8089 chr9 98441574 98441784 + 6.83 0.000 intron (NM_005458, intron 7 of 18) L1MB3|LINE|L1 -186030 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr15-2479 chr15 92644238 92644448 + 6.83 0.000 intron (NM_207446, intron 1 of 2) intron (NM_207446, intron 1 of 2) 11432 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr10-9009 chr10 121900564 121900774 + 6.83 0.000 intron (NR_110006, intron 4 of 9) intron (NR_110006, intron 4 of 9) 27362 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr11-9378 chr11 50538036 50538246 + 6.83 0.000 Intergenic ALR/Alpha|Satellite|centr 128994 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo chr15-3438 chr15 90993538 90993748 + 6.83 0.000 intron (NM_199413, intron 1 of 13) intron (NM_199413, intron 1 of 13) 892 NM_003981 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding chr6-4463 chr6 35561510 35561720 + 6.83 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -48719 NM_003322 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr9-6969 chr9 107080274 107080484 + 6.83 0.000 intron (NR_126029, intron 3 of 4) intron (NR_126029, intron 3 of 4) 22609 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr2-4981 chr2 204081475 204081685 + 6.83 0.000 Intergenic Intergenic 144832 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr18-3070 chr18 32217988 32218198 + 6.83 0.000 intron (NM_001308171, intron 14 of 14) intron (NM_001308171, intron 14 of 14) 28054 NM_005925 4225 Hs.194777 NM_005925 ENSG00000141434 MEP1B - meprin A subunit beta protein-coding chr2-13316 chr2 131491002 131491212 + 6.83 0.000 TTS (NR_039945) TTS (NR_039945) 129 NR_039945 100616378 NR_039945 ENSG00000284149 MIR4784 - microRNA 4784 ncRNA chr1-11445 chr1 77394107 77394317 + 6.83 0.000 intron (NM_012093, intron 6 of 13) AluSz|SINE|Alu 111125 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr2-8126 chr2 80384626 80384836 + 6.83 0.000 intron (NM_001282599, intron 1 of 11) intron (NM_001282599, intron 1 of 11) 71352 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr11-6503 chr11 68678688 68678898 + 6.83 0.000 Intergenic Intergenic -5751 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr17-6720 chr17 80928966 80929176 + 6.83 0.000 intron (NM_020761, intron 24 of 33) L1M5|LINE|L1 42142 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr10-8619 chr10 97901564 97901774 + 6.83 0.000 intron (NM_001206528, intron 7 of 14) intron (NM_001206528, intron 7 of 14) -25772 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr4-6253 chr4 71666323 71666533 + 6.83 0.000 Intergenic Intergenic 117651 NM_000583 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr1-15473 chr1 154874109 154874319 + 6.83 0.000 Intergenic Intergenic -3933 NM_002249 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr1-11296 chr1 13888603 13888813 + 6.83 0.000 Intergenic LTR22A|LTR|ERVK 139293 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr5-3934 chr5 179161157 179161367 + 6.83 0.000 intron (NM_014244, intron 5 of 21) intron (NM_014244, intron 5 of 21) 100889 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr3-6755 chr3 141129404 141129614 + 6.83 0.000 intron (NM_080862, intron 2 of 2) HAL1ME|LINE|L1 78162 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr5-3510 chr5 178332272 178332482 + 6.83 0.000 intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) -99555 NM_001278346 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr10-8623 chr10 97958149 97958359 + 6.83 0.000 intron (NM_001206528, intron 2 of 14) intron (NM_001206528, intron 2 of 14) 72367 NM_018058 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr7-6655 chr7 131767446 131767656 + 6.83 0.000 Intergenic MSTA|LTR|ERVL-MaLR -142669 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr4-8578 chr4 168514165 168514375 + 6.83 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) 17218 NM_016081 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr19-4547 chr19 10295412 10295622 + 6.83 0.000 exon (NM_003259, exon 10 of 11) exon (NM_003259, exon 10 of 11) 5565 NM_003259 7087 Hs.465862 NM_003259 ENSG00000105376 ICAM5 TLCN|TLN intercellular adhesion molecule 5 protein-coding chr10-8963 chr10 118830615 118830825 + 6.83 0.000 Intergenic L1M5|LINE|L1 -75750 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr10-5211 chr10 61988130 61988340 + 6.83 0.000 intron (NM_032199, intron 3 of 9) intron (NM_032199, intron 3 of 9) -61122 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr12-6433 chr12 85319630 85319840 + 6.83 0.000 Intergenic Intergenic 39515 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr4-5161 chr4 155614520 155614730 + 6.83 0.000 Intergenic Intergenic -52085 NM_001130687 2982 Hs.24258 NM_000856 ENSG00000164116 GUCY1A1 GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6 guanylate cyclase 1 soluble subunit alpha 1 protein-coding chr8-6833 chr8 97909160 97909370 + 6.83 0.000 intron (NM_002380, intron 2 of 18) intron (NM_002380, intron 2 of 18) 40201 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr3-4446 chr3 32029608 32029818 + 6.83 0.000 Intergenic Intergenic -47863 NM_017784 114884 Hs.150122 NM_017784 ENSG00000144645 OSBPL10 ORP10|OSBP9 oxysterol binding protein like 10 protein-coding chr1-9233 chr1 22969318 22969528 + 6.83 0.000 intron (NM_001289974, intron 2 of 7) intron (NM_001289974, intron 2 of 7) 3443 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr18-2083 chr18 49055792 49056002 + 6.83 0.000 intron (NM_001353210, intron 16 of 16) intron (NM_001353210, intron 16 of 16) -6129 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr14-3423 chr14 96618764 96618974 + 6.83 0.000 Intergenic Intergenic 116004 NM_001293628 10914 Hs.253726 NM_032632 ENSG00000090060 PAPOLA PAP|PAP-alpha poly(A) polymerase alpha protein-coding chr16-5647 chr16 67022369 67022579 + 6.83 0.000 Intergenic AluJb|SINE|Alu -6675 NM_001368709 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding chr14-5066 chr14 83708670 83708880 + 6.83 0.000 Intergenic MER50|LTR|ERV1 1066143 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chrX-1164 chrX 46545225 46545435 + 6.83 0.000 promoter-TSS (NR_015378) promoter-TSS (NR_015378) 91 NM_001190417 641339 Hs.636105 NM_001039891 ENSG00000251192 ZNF674 MRX92|ZNF673B zinc finger protein 674 protein-coding chr2-13997 chr2 190781768 190781978 + 6.83 0.000 Intergenic L1MC4|LINE|L1 -98948 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chrX-2330 chrX 56994765 56994975 + 6.83 0.000 non-coding (NR_027139, exon 2 of 5) non-coding (NR_027139, exon 2 of 5) 671 NR_027139 169981 Hs.522672 NM_001010862 ENSG00000204271 SPIN3 SPIN-3|TDRD27|bA445O16.1 spindlin family member 3 protein-coding chr5-7246 chr5 10863326 10863536 + 6.83 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -102197 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr11-4977 chr11 70618257 70618467 + 6.83 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) -12732 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA chrX-4677 chrX 83536867 83537077 + 6.83 0.000 Intergenic Intergenic 28682 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr4-7470 chr4 70969074 70969284 + 6.83 0.000 intron (NM_173468, intron 2 of 5) AluJr|SINE|Alu -24470 NM_000788 1633 Hs.709 NM_000788 ENSG00000156136 DCK - deoxycytidine kinase protein-coding chr6-8276 chr6 141208177 141208387 + 6.83 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 524468 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr2-6518 chr2 198258982 198259192 + 6.83 0.000 Intergenic MER1B|DNA|hAT-Charlie 116010 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr13-2903 chr13 113315989 113316199 + 6.83 0.000 intron (NM_005561, intron 4 of 8) AluSx1|SINE|Alu 18855 NM_005561 3916 Hs.494419 NM_005561 ENSG00000185896 LAMP1 CD107a|LAMPA|LGP120 lysosomal associated membrane protein 1 protein-coding chr2-8229 chr2 96694279 96694489 + 6.83 0.000 exon (NM_001293083, exon 34 of 53) exon (NM_001293083, exon 34 of 53) 45692 NM_030805 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr8-5554 chr8 73169381 73169591 + 6.83 0.000 Intergenic Intergenic -76314 NM_153225 157869 Hs.439040 NM_153225 ENSG00000164764 SBSPON C8orf84|RPESP somatomedin B and thrombospondin type 1 domain containing protein-coding chr1-16097 chr1 203497609 203497819 + 6.83 0.000 intron (NM_014359, intron 3 of 7) intron (NM_014359, intron 3 of 7) 3561 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr10-7625 chr10 22672682 22672892 + 6.83 0.000 intron (NM_005028, intron 1 of 9) intron (NM_005028, intron 1 of 9) 41321 NM_001330062 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr18-3386 chr18 59634306 59634516 + 6.83 0.000 intron (NM_133459, intron 2 of 10) L1MEd|LINE|L1 63012 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr9-7679 chr9 70470355 70470565 + 6.83 0.000 Intergenic MIR|SINE|MIR -55803 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr4-8589 chr4 169292364 169292574 + 6.83 0.000 Intergenic Intergenic -21513 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr3-6089 chr3 52370082 52370292 + 6.83 0.000 exon (NM_015512, exon 39 of 78) exon (NM_015512, exon 39 of 78) 39821 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr11-5760 chr11 3569817 3570027 + 6.83 0.000 intron (NR_126335, intron 1 of 2) MIRc|SINE|MIR 2065 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA chr12-5090 chr12 94508288 94508498 + 6.83 0.000 Intergenic MSTB|LTR|ERVL-MaLR -47939 NM_001368038 51134 Hs.279209 NM_016122 ENSG00000173588 CEP83 CCDC41|NPHP18|NY-REN-58 centrosomal protein 83 protein-coding chr8-6676 chr8 80836150 80836360 + 6.83 0.000 intron (NM_001033723, intron 1 of 8) L2a|LINE|L2 38213 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr6-6529 chr6 130076059 130076269 + 6.83 0.000 intron (NM_001007102, intron 12 of 21) intron (NM_001007102, intron 12 of 21) 56520 NM_001346550 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr4-8141 chr4 127685407 127685617 + 6.83 0.000 intron (NM_015693, intron 7 of 15) intron (NM_015693, intron 7 of 15) -44888 NM_031291 83447 Hs.149030 NM_031291 ENSG00000151475 SLC25A31 AAC4|ANT 4|ANT4|SFEC35kDa solute carrier family 25 member 31 protein-coding chr3-11165 chr3 190265495 190265705 + 6.83 0.000 Intergenic Intergenic 56846 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr12-6790 chr12 10011111 10011321 + 6.83 0.000 intron (NR_135049, intron 1 of 5) intron (NR_135049, intron 1 of 5) 589 NR_135049 387837 Hs.127937 NM_205852 ENSG00000256660 CLEC12B UNQ5782 C-type lectin domain family 12 member B protein-coding chr16-5262 chr16 52067655 52067865 + 6.83 0.000 intron (NM_001242473, intron 1 of 5) intron (NM_001242473, intron 1 of 5) 6175 NM_001242473 388276 Hs.534669 NM_001242473 C16orf97 - chromosome 16 open reading frame 97 protein-coding chr19-5318 chr19 2971271 2971481 + 6.83 0.000 Intergenic LTR26B|LTR|ERV1 -6188 NM_024760 79816 Hs.334507 NM_024760 ENSG00000104953 TLE6 GRG6|PREMBL TLE family member 6, subcortical maternal complex member protein-coding chr11-7881 chr11 123488704 123488914 + 6.83 0.000 intron (NM_001367419, intron 2 of 20) intron (NM_001367419, intron 2 of 20) -21107 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr19-3416 chr19 17539490 17539700 + 6.83 0.000 intron (NM_001098524, intron 8 of 15) CpG-14001 12326 NM_001321828 199786 Hs.434133 NM_173544 ENSG00000167483 NIBAN3 BCNP1|FAM129C niban apoptosis regulator 3 protein-coding chr17-3472 chr17 43431025 43431235 + 6.83 0.000 Intergenic L2b|LINE|L2 -13577 NR_146952 106660605 NR_146952 ENSG00000267151 MIR2117HG - MIR2117 host gene ncRNA chr5-7666 chr5 53919250 53919460 + 6.83 0.000 intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) 32244 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr22-4065 chr22 42443531 42443741 + 6.83 0.000 Intergenic Intergenic -5650 NM_001371362 chr3-6230 chr3 65829325 65829535 + 6.83 0.000 intron (NM_001365904, intron 1 of 24) MLT1A0|LTR|ERVL-MaLR -64386 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr11-6836 chr11 95705690 95705900 + 6.83 0.000 Intergenic Intergenic 83987 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr18-437 chr18 70289510 70289720 + 6.83 0.000 intron (NM_004232, intron 1 of 1) CpG 570 NM_004232 9306 Hs.44439 NM_004232 ENSG00000170677 SOCS6 CIS-4|CIS4|HSPC060|SOCS-4|SOCS-6|SOCS4|SSI4|STAI4|STATI4 suppressor of cytokine signaling 6 protein-coding chr8-6709 chr8 84948678 84948888 + 6.83 0.000 Intergenic Intergenic -158455 NM_033402 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chr22-2348 chr22 43035619 43035829 + 6.83 0.000 Intergenic Intergenic -2861 NR_125362 100506679 Hs.706553 NR_125362 ENSG00000230319 LOC100506679 - uncharacterized LOC100506679 ncRNA chr2-14072 chr2 198305041 198305251 + 6.83 0.000 intron (NR_110267, intron 2 of 2) intron (NR_110267, intron 2 of 2) 69951 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr1-16327 chr1 217525892 217526102 + 6.83 0.000 intron (NM_018040, intron 5 of 9) intron (NM_018040, intron 5 of 9) 105093 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr8-4920 chr8 98493665 98493875 + 6.83 0.000 intron (NM_006281, intron 10 of 10) L2c|LINE|L2 66812 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr2-6968 chr2 127094703 127094913 + 6.83 0.000 intron (NM_001320633, intron 1 of 14) intron (NM_001320633, intron 1 of 14) -10258 NM_001320642 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr1-10400 chr1 156816816 156817026 + 6.83 0.000 promoter-TSS (NM_003975) promoter-TSS (NM_003975) -73 NM_001161441 9047 Hs.103527 NM_003975 ENSG00000027869 SH2D2A F2771|SCAP|TSAD|VRAP SH2 domain containing 2A protein-coding chr5-8717 chr5 143395624 143395834 + 6.83 0.000 intron (NR_157096, intron 1 of 7) (CTAAGC)n|Simple_repeat|Simple_repeat 7554 NM_001364185 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr7-7517 chr7 103516571 103516781 + 6.83 0.000 intron (NM_005045, intron 49 of 64) intron (NM_005045, intron 49 of 64) -70469 NM_198999 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chrX-3175 chrX 35402491 35402701 + 6.83 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -395746 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr16-5657 chr16 68144978 68145188 + 6.83 0.000 intron (NM_004555, intron 3 of 10) AluSz6|SINE|Alu 59713 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr10-6778 chr10 1710180 1710390 + 6.83 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) 27240 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr19-4926 chr19 43545754 43545964 + 6.83 0.000 exon (NM_006297, exon 14 of 17) exon (NM_006297, exon 14 of 17) 12671 NM_174945 284346 Hs.213534 NM_174945 ENSG00000176472 ZNF575 - zinc finger protein 575 protein-coding chr3-10242 chr3 123143624 123143834 + 6.83 0.000 intron (NM_006810, intron 11 of 16) intron (NM_006810, intron 11 of 16) -18065 NR_106960 102465667 NR_106960 ENSG00000284421 MIR7110 hsa-mir-7110 microRNA 7110 ncRNA chr1-15128 chr1 102656014 102656224 + 6.83 0.000 Intergenic L2a|LINE|L2 452377 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr10-3477 chr10 63415745 63415955 + 6.83 0.000 intron (NM_001322258, intron 1 of 24) intron (NM_001322258, intron 1 of 24) -14725 NR_134312 105378330 Hs.602852 NR_134312 LOC105378330 - uncharacterized LOC105378330 ncRNA chr11-10686 chr11 128859271 128859481 + 6.83 0.000 intron (NM_153766, intron 1 of 2) AluJr|SINE|Alu 7997 NM_153767 3758 Hs.527830 NM_000220 ENSG00000151704 KCNJ1 KIR1.1|ROMK|ROMK1 potassium voltage-gated channel subfamily J member 1 protein-coding chr2-13884 chr2 179883689 179883899 + 6.83 0.000 Intergenic Intergenic -22182 NR_148057 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr9-5524 chr9 107403383 107403593 + 6.83 0.000 Intergenic Intergenic 63097 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr20-3840 chr20 24741389 24741599 + 6.83 0.000 Intergenic L1M5|LINE|L1 -207775 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr2-4603 chr2 115886850 115887060 + 6.83 0.000 Intergenic Intergenic 543140 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr5-5491 chr5 140889781 140889991 + 6.83 0.000 intron (NM_018904, intron 1 of 3) MLT1G|LTR|ERVL-MaLR 7617 NM_031865 56136 Hs.199343 NM_018904 ENSG00000239389 PCDHA13 CNR5|CNRN5|CNRS5|CRNR5|PCDH-ALPHA13 protocadherin alpha 13 protein-coding chr8-7365 chr8 137061611 137061821 + 6.83 0.000 Intergenic L1MEb|LINE|L1 351872 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr2-8577 chr2 136728239 136728449 + 6.83 0.000 Intergenic L1PA16|LINE|L1 -37201 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr7-4819 chr7 99676645 99676855 + 6.83 0.000 intron (NR_033807, intron 1 of 12) intron (NR_033807, intron 1 of 12) 3246 NM_000777 1577 Hs.571258 NM_000777 ENSG00000106258 CYP3A5 CP35|CYPIIIA5|P450PCN3|PCN3 cytochrome P450 family 3 subfamily A member 5 protein-coding chr21-675 chr21 7945579 7945789 + 6.83 0.000 Intergenic (CATTC)n|Satellite|Satellite -116052 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chr17-4476 chr17 64326427 64326637 + 6.83 0.000 intron (NM_000442, intron 15 of 15) intron (NM_000442, intron 15 of 15) -63272 NM_018469 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr8-4672 chr8 138728413 138728623 + 6.83 0.000 intron (NM_152888, intron 23 of 64) intron (NM_152888, intron 23 of 64) 185523 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr18-1771 chr18 10473236 10473446 + 6.83 0.000 intron (NM_153000, intron 3 of 4) intron (NM_153000, intron 3 of 4) 18706 NM_153000 147495 Hs.293274 NM_153000 ENSG00000154856 APCDD1 B7323|DRAPC1|FP7019|HHS|HTS|HYPT1 APC down-regulated 1 protein-coding chr14-4846 chr14 69657628 69657838 + 6.83 0.000 intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 46137 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr4-4827 chr4 108490946 108491156 + 6.83 0.000 Intergenic MLT2B1|LTR|ERVL -66182 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chrX-3076 chrX 121157080 121157290 + 6.83 0.000 Intergenic Intergenic 109575 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chr4-7263 chr4 47806121 47806331 + 6.83 0.000 intron (NM_006587, intron 2 of 21) Charlie15b|DNA|hAT-Charlie -25119 NR_125881 101927179 Hs.570822 NR_125880 LOC101927179 - uncharacterized LOC101927179 ncRNA chr3-3411 chr3 87088808 87089018 + 6.83 0.000 promoter-TSS (NR_047469) promoter-TSS (NR_047469) -367 NR_104153 100846978 Hs.570649 NR_047469 ENSG00000281392 LINC00506 - long intergenic non-protein coding RNA 506 ncRNA chr4-6388 chr4 112694383 112694593 + 6.83 0.000 Intergenic AluJr|SINE|Alu -11530 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr4-3032 chr4 134388477 134388687 + 6.83 0.000 Intergenic Intergenic -35286 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr7-7292 chr7 39411829 39412039 + 6.83 0.000 intron (NM_001370959, intron 6 of 9) intron (NM_001370959, intron 6 of 9) -5588 NR_046711 100861520 Hs.571292 NR_046711 ENSG00000224122 POU6F2-AS1 - POU6F2 antisense RNA 1 ncRNA chr2-13290 chr2 129163180 129163390 + 6.83 0.000 Intergenic Intergenic 110606 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr2-13565 chr2 154785444 154785654 + 6.83 0.000 intron (NM_002239, intron 2 of 2) MSTC|LTR|ERVL-MaLR 86854 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr16-6698 chr16 70627530 70627740 + 6.83 0.000 intron (NM_001172772, intron 1 of 6) AluJo|SINE|Alu 3643 NM_001172772 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr22-2845 chr22 44423521 44423731 + 6.83 0.000 Intergenic Intergenic -19701 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 - long intergenic non-protein coding RNA 1656 ncRNA chr14-2687 chr14 77327795 77328005 + 6.83 0.000 intron (NM_145871, intron 4 of 7) intron (NM_145871, intron 4 of 7) 3361 NM_001363703 2954 Hs.655292 NM_001513 ENSG00000100577 GSTZ1 GSTZ1-1|MAAI|MAAID|MAI glutathione S-transferase zeta 1 protein-coding chr8-7014 chr8 109662139 109662349 + 6.83 0.000 intron (NM_001099743, intron 1 of 7) MIR|SINE|MIR -13341 NM_001099748 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr11-5217 chr11 14967311 14967521 + 6.83 0.000 intron (NR_125898, intron 5 of 5) intron (NR_125898, intron 5 of 5) 4870 NM_001033952 796 Hs.37058 NM_001741 ENSG00000110680 CALCA CALC1|CGRP|CGRP-I|CGRP1|CT|KC|PCT calcitonin related polypeptide alpha protein-coding chr2-13792 chr2 173091361 173091571 + 6.83 0.000 intron (NM_133646, intron 2 of 11) intron (NM_133646, intron 2 of 11) 15620 NM_016653 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr14-2467 chr14 87925850 87926060 + 6.83 0.000 Intergenic L1ME2|LINE|L1 67227 NM_000153 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr2-11004 chr2 102281196 102281406 + 6.83 0.000 Intergenic Intergenic -30201 NM_001282408 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr13-3692 chr13 36673870 36674080 + 6.83 0.000 promoter-TSS (NM_203451) promoter-TSS (NM_203451) -45 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr15-3393 chr15 88699358 88699568 + 6.83 0.000 Intergenic Intergenic 60447 NM_001303236 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr7-6198 chr7 130144723 130144933 + 6.83 0.000 Intergenic L5|LINE|RTE-X 3097 NR_149033 100128325 Hs.105944 NR_149033 ENSG00000229196 LOC100128325 - uncharacterized LOC100128325 ncRNA chr17-6330 chr17 64741704 64741914 + 6.83 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -38950 NR_106728 102464831 NR_106728 ENSG00000278581 MIR6080 hsa-mir-6080 microRNA 6080 ncRNA chr5-5038 chr5 87572173 87572383 + 6.83 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -89764 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr18-1548 chr18 23406594 23406804 + 6.83 0.000 intron (NR_148382, intron 1 of 12) MER57D|LTR|ERV1 31262 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr2-12091 chr2 33521944 33522154 + 6.83 0.000 exon (NM_001139488, exon 7 of 18) exon (NM_001139488, exon 7 of 18) 8174 NM_015376 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding chr18-2812 chr18 5057602 5057812 + 6.83 0.000 Intergenic Intergenic -23475 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA chr20-3740 chr20 18378332 18378542 + 6.83 0.000 promoter-TSS (NR_034167) promoter-TSS (NR_034167) -612 NR_034167 440757 Hs.120399 NM_001004344 ENSG00000237282 LINC00851 DZANK1-AS1 long intergenic non-protein coding RNA 851 ncRNA chr7-3934 chr7 129060405 129060615 + 6.83 0.000 Intergenic AluSx|SINE|Alu 5287 NR_002187 286016 Hs.369665 NR_002187 ENSG00000230359 TPI1P2 - triosephosphate isomerase 1 pseudogene 2 pseudo chr4-8548 chr4 165217171 165217381 + 6.83 0.000 intron (NM_001161522, intron 1 of 13) intron (NM_001161522, intron 1 of 13) 7257 NM_001161522 11275 Hs.388668 NM_007246 ENSG00000109466 KLHL2 ABP-KELCH|MAV|MAYVEN kelch like family member 2 protein-coding chr12-2717 chr12 129639368 129639578 + 6.83 0.000 intron (NM_133448, intron 2 of 8) intron (NM_133448, intron 2 of 8) 264552 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr12-3387 chr12 102749697 102749907 + 6.83 0.000 Intergenic Intergenic 74597 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr17-3854 chr17 44533738 44533948 + 6.83 0.000 Intergenic Intergenic -23641 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr22-3489 chr22 45532312 45532522 + 6.83 0.000 intron (NM_006487, intron 5 of 14) intron (NM_006487, intron 5 of 14) 29534 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr11-7405 chr11 88719310 88719520 + 6.83 0.000 intron (NM_001143831, intron 2 of 8) L1PA13|LINE|L1 214839 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr12-5295 chr12 111194565 111194775 + 6.83 0.000 intron (NM_001370598, intron 1 of 21) L2c|LINE|L2 94666 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chrX-2310 chrX 54783546 54783756 + 6.83 0.000 intron (NM_198510, intron 5 of 12) L1MA2|LINE|L1 14604 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr5-2779 chr5 174198423 174198633 + 6.83 0.000 Intergenic MIRb|SINE|MIR -137826 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr1-7661 chr1 11204770 11204980 + 6.83 0.000 intron (NM_004958, intron 25 of 57) intron (NM_004958, intron 25 of 57) 15520 NM_021146 10218 Hs.146559 NM_021146 ENSG00000171819 ANGPTL7 AngX|CDT6|dJ647M16.1 angiopoietin like 7 protein-coding chr1-14380 chr1 43533893 43534103 + 6.83 0.000 intron (NM_002840, intron 1 of 33) intron (NM_002840, intron 1 of 33) 3115 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr16-6354 chr16 50622270 50622480 + 6.83 0.000 intron (NM_033119, intron 5 of 9) intron (NM_033119, intron 5 of 9) -46480 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr1-10867 chr1 205481448 205481658 + 6.83 0.000 Intergenic Intergenic -23116 NM_212502 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr14-4713 chr14 59046824 59047034 + 6.83 0.000 Intergenic MER70C|LTR|ERVL -141738 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr1-12035 chr1 110545343 110545553 + 6.83 0.000 Intergenic L2a|LINE|L2 -26273 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr17-7046 chr17 61904585 61904795 + 6.83 0.000 intron (NM_001351695, intron 8 of 24) intron (NM_001351695, intron 8 of 24) 23292 NM_001330417 57508 Hs.279646 NM_020748 ENSG00000108506 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding chr3-7850 chr3 115916808 115917018 + 6.83 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) -11787 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr1-16478 chr1 228879938 228880148 + 6.83 0.000 Intergenic MER21C|LTR|ERVL 144564 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr7-3982 chr7 135819306 135819516 + 6.83 0.000 Intergenic Intergenic -70598 NM_001369697 389558 Hs.55200 NM_205855 ENSG00000189320 FAM180A UNQ1940 family with sequence similarity 180 member A protein-coding chr11-9433 chr11 60777340 60777550 + 6.83 0.000 TTS (NR_103481) TTS (NR_103481) -7888 NM_206893 341116 Hs.591956 NM_206893 ENSG00000172689 MS4A10 CD20L7|MS4A9 membrane spanning 4-domains A10 protein-coding chr15-4497 chr15 51281350 51281560 + 6.83 0.000 intron (NR_146310, intron 2 of 2) intron (NR_146310, intron 2 of 2) 807 NM_001347251 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr20-2316 chr20 8423884 8424094 + 6.83 0.000 intron (NM_182734, intron 3 of 32) intron (NM_182734, intron 3 of 32) 175285 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr2-9048 chr2 199994776 199994986 + 6.83 0.000 Intergenic Intergenic -39390 NR_109907 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr8-6208 chr8 37069450 37069660 + 6.83 0.000 Intergenic MIRb|SINE|MIR 285181 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr12-4763 chr12 52655907 52656117 + 6.83 0.000 Intergenic Intergenic -3801 NM_000423 3849 Hs.707 NM_000423 ENSG00000172867 KRT2 CK-2e|K2e|KRT2A|KRT2E|KRTE keratin 2 protein-coding chr5-5170 chr5 110031941 110032151 + 6.83 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 148864 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr1-13620 chr1 9730300 9730510 + 6.83 0.000 3' UTR (NM_001302883, exon 18 of 18) 3' UTR (NM_001302883, exon 18 of 18) 38938 NM_001350235 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chrX-2816 chrX 135189709 135189919 + 6.83 0.000 Intergenic L1MA6|LINE|L1 -17987 NM_017863 54967 Hs.272804 NM_017863 ENSG00000169551 CT55 BJHCC20A|CXorf48 cancer/testis antigen 55 protein-coding chr11-9056 chr11 29257379 29257589 + 6.83 0.000 Intergenic L1PA16|LINE|L1 -336929 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr8-6586 chr8 71630028 71630238 + 6.83 0.000 Intergenic Intergenic -82039 NM_001370336 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr12-4428 chr12 8780507 8780717 + 6.83 0.000 non-coding (NR_147946, exon 9 of 10) non-coding (NR_147946, exon 9 of 10) -42009 NM_144670 144568 Hs.620532 NM_144670 ENSG00000166535 A2ML1 CPAMD9|OMS|p170 alpha-2-macroglobulin like 1 protein-coding chr19-6986 chr19 48741812 48742022 + 6.83 0.000 exon (NM_001321865, exon 7 of 9) exon (NM_001321865, exon 7 of 9) -1307 NM_017805 54922 Hs.233955 NM_017805 ENSG00000105538 RASIP1 RAIN Ras interacting protein 1 protein-coding chr1-13479 chr1 3645150 3645360 + 6.83 0.000 intron (NM_017818, intron 3 of 11) intron (NM_017818, intron 3 of 11) 4848 NM_017818 49856 Hs.31714 NM_017818 ENSG00000116213 WRAP73 WDR8 WD repeat containing, antisense to TP73 protein-coding chr2-6571 chr2 222789484 222789694 + 6.83 0.000 Intergenic LTR81B|LTR|Gypsy -71447 NM_001354159 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr10-5202 chr10 61073860 61074070 + 6.83 0.000 Intergenic Intergenic 57690 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr12-3410 chr12 107377214 107377424 + 6.83 0.000 intron (NM_001347944, intron 1 of 14) LTR16A|LTR|ERVL 56731 NM_001347944 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr8-5686 chr8 122858147 122858357 + 6.83 0.000 intron (NM_001362797, intron 1 of 4) intron (NM_001362797, intron 1 of 4) 76597 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr5-6432 chr5 157307923 157308133 + 6.83 0.000 intron (NM_001037333, intron 9 of 30) intron (NM_001037333, intron 9 of 30) 37649 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr3-7167 chr3 186677329 186677539 + 6.83 0.000 exon (NM_000412, exon 7 of 7) exon (NM_000412, exon 7 of 7) 11482 NM_000412 3273 Hs.1498 NM_000412 ENSG00000113905 HRG HPRG|HRGP|THPH11 histidine rich glycoprotein protein-coding chr17-5199 chr17 14669138 14669348 + 6.83 0.000 Intergenic Intergenic -345562 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr7-9097 chr7 106038897 106039107 + 6.83 0.000 Intergenic Intergenic 73310 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr6-5923 chr6 63963861 63964071 + 6.83 0.000 intron (NM_001292009, intron 35 of 43) intron (NM_001292009, intron 35 of 43) 157130 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr11-7907 chr11 131160119 131160329 + 6.83 0.000 Intergenic Intergenic -210391 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr4-4098 chr4 5812925 5813135 + 6.83 0.000 3' UTR (NM_153717, exon 21 of 21) 3' UTR (NM_153717, exon 21 of 21) 74783 NM_001288662 1400 Hs.135270 NM_001313 ENSG00000072832 CRMP1 CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 collapsin response mediator protein 1 protein-coding chr8-4624 chr8 132506701 132506911 + 6.83 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -25711 NM_004519 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr18-1896 chr18 29999712 29999922 + 6.83 0.000 Intergenic Intergenic -299093 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr7-8738 chr7 76395233 76395443 + 6.83 0.000 intron (NM_080744, intron 6 of 10) intron (NM_080744, intron 6 of 10) -2184 NM_007155 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr16-5715 chr16 82369839 82370049 + 6.83 0.000 Intergenic Intergenic -199720 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr11-9171 chr11 35195903 35196113 + 6.83 0.000 intron (NM_001202556, intron 5 of 7) intron (NM_001202556, intron 5 of 7) 33058 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr12-6071 chr12 118156625 118156835 + 6.83 0.000 intron (NM_001346490, intron 20 of 21) intron (NM_001346490, intron 20 of 21) 20606 NM_002567 5037 Hs.433863 NM_002567 ENSG00000089220 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|HEL-S-96|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding chr9-8291 chr9 113644496 113644706 + 6.83 0.000 Intergenic L1ME1|LINE|L1 50472 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr2-4930 chr2 167609431 167609641 + 6.83 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -209136 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chrX-5095 chrX 127547992 127548202 + 6.83 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 504306 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr17-7821 chr17 40580501 40580711 + 6.83 0.000 Intergenic AluJb|SINE|Alu -15134 NM_001301714 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr12-7101 chr12 44996479 44996689 + 6.83 0.000 Intergenic MER20|DNA|hAT-Charlie 54515 NM_001004329 440097 Hs.302764 NM_001004329 ENSG00000185610 DBX2 - developing brain homeobox 2 protein-coding chr3-7795 chr3 87792567 87792777 + 6.83 0.000 promoter-TSS (NM_001322208) promoter-TSS (NM_001322208) -34 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr2-2941 chr2 10097380 10097590 + 6.83 0.000 Intergenic Intergenic -17074 NM_001037160 192668 Hs.27092 NM_001037160 ENSG00000205795 CYS1 - cystin 1 protein-coding chr9-8019 chr9 94869431 94869641 + 6.83 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 59574 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr4-5729 chr4 45630677 45630887 + 6.83 0.000 Intergenic L1MA3|LINE|L1 493272 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr5-5669 chr5 159317431 159317641 + 6.83 0.000 intron (NM_002187, intron 6 of 7) intron (NM_002187, intron 6 of 7) 12937 NM_002187 3593 Hs.674 NM_002187 ENSG00000113302 IL12B CLMF|CLMF2|IL-12B|IMD28|IMD29|NKSF|NKSF2 interleukin 12B protein-coding chr12-7675 chr12 86333304 86333514 + 6.83 0.000 intron (NM_001351286, intron 4 of 7) intron (NM_001351286, intron 4 of 7) -76110 NM_001351287 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding chr1-8723 chr1 230991036 230991246 + 6.83 0.000 intron (NM_001346992, intron 4 of 6) intron (NM_001346992, intron 4 of 6) 12047 NM_001346992 64801 Hs.275736 NM_022786 ENSG00000173409 ARV1 EIEE38 ARV1 homolog, fatty acid homeostasis modulator protein-coding chr11-9768 chr11 69396105 69396315 + 6.83 0.000 Intergenic MER20|DNA|hAT-Charlie -29445 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr9-7803 chr9 80441708 80441918 + 6.83 0.000 Intergenic Intergenic 466790 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr13-2880 chr13 111473415 111473625 + 6.83 0.000 Intergenic Intergenic -122489 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr1-11054 chr1 224456935 224457145 + 6.83 0.000 intron (NM_001322302, intron 2 of 6) intron (NM_001322302, intron 2 of 6) 22191 NR_136294 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr6-2692 chr6 28029051 28029261 + 6.83 0.000 Intergenic L1PA4|LINE|L1 -44160 NM_001355425 442179 NM_001355425 OR1F12 OR1F12P|OR1F12Q|OR6-12|hs6M1-35P olfactory receptor family 1 subfamily F member 12 protein-coding chr2-12538 chr2 66455584 66455794 + 6.83 0.000 intron (NM_002398, intron 6 of 12) intron (NM_002398, intron 6 of 12) -15359 NR_046625 100873998 Hs.734698 NR_046625 ENSG00000230749 MEIS1-AS2 MEIS1-AS1 MEIS1 antisense RNA 2 ncRNA chr12-5582 chr12 27422506 27422716 + 6.83 0.000 3' UTR (NM_020183, exon 17 of 17) 3' UTR (NM_020183, exon 17 of 17) 24023 NR_109975 101928646 Hs.434269 NR_109975 ENSG00000245311 ARNTL2-AS1 - ARNTL2 antisense RNA 1 ncRNA chr11-5891 chr11 12624233 12624443 + 6.83 0.000 Intergenic L1MB7|LINE|L1 -50083 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr5-5060 chr5 93022971 93023181 + 6.83 0.000 Intergenic Intergenic 548267 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr14-4961 chr14 74957751 74957961 + 6.83 0.000 Intergenic Intergenic -2092 NM_001293643 5228 Hs.252820 NM_002632 ENSG00000119630 PGF D12S1900|PGFL|PIGF|PLGF|PlGF-2|SHGC-10760 placental growth factor protein-coding chrX-2628 chrX 109626498 109626708 + 6.83 0.000 Intergenic Intergenic -1431 NM_012282 23630 Hs.522753 NM_012282 ENSG00000176076 KCNE5 KCNE1L potassium voltage-gated channel subfamily E regulatory subunit 5 protein-coding chr13-4152 chr13 85260797 85261007 + 6.83 0.000 Intergenic MER39|LTR|ERV1 -102701 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr6-8140 chr6 129653649 129653859 + 6.83 0.000 intron (NM_033515, intron 1 of 14) intron (NM_033515, intron 1 of 14) 56423 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr11-10675 chr11 128399233 128399443 + 6.83 0.000 Intergenic Intergenic 122972 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr2-5705 chr2 212005182 212005392 + 6.83 0.000 intron (NM_001042599, intron 2 of 26) intron (NM_001042599, intron 2 of 26) 421073 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr2-7876 chr2 53111491 53111701 + 6.83 0.000 Intergenic Intergenic -408981 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr3-5515 chr3 196210926 196211136 + 6.83 0.000 intron (NM_001039617, intron 1 of 7) intron (NM_001039617, intron 1 of 7) 369 NR_135617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr11-6811 chr11 92792787 92792997 + 6.83 0.000 exon (NM_001367949, exon 9 of 28) exon (NM_001367949, exon 9 of 28) 122736 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr12-5694 chr12 108275967 108276177 + 6.83 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 44590 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr20-3367 chr20 33002180 33002390 + 6.83 0.000 intron (NM_080675, intron 3 of 12) intron (NM_080675, intron 3 of 12) 2148 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr14-4586 chr14 50040689 50040899 + 6.83 0.000 intron (NR_131171, intron 4 of 8) intron (NR_131171, intron 4 of 8) -33274 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr13-1101 chr13 106917690 106917900 + 6.83 0.000 Intergenic G-rich|Low_complexity|Low_complexity 263915 NR_047026 100874173 Hs.569297 NR_047026 ENSG00000230156 LINC00443 - long intergenic non-protein coding RNA 443 ncRNA chr9-6007 chr9 135257135 135257345 + 6.83 0.000 Intergenic Intergenic 75631 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chr12-8325 chr12 129993879 129994089 + 6.83 0.000 Intergenic Intergenic 48358 NR_024457 100190940 Hs.625993 NR_024457 ENSG00000214039 LINC02418 - long intergenic non-protein coding RNA 2418 ncRNA chr17-8516 chr17 79167679 79167889 + 6.83 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 92847 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr5-7986 chr5 84301552 84301762 + 6.83 0.000 intron (NM_001278642, intron 1 of 9) intron (NM_001278642, intron 1 of 9) 83210 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr22-3283 chr22 47164237 47164447 + 6.83 0.000 intron (NM_001284305, intron 12 of 12) intron (NM_001284305, intron 12 of 12) -181229 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr3-10459 chr3 133582276 133582486 + 6.83 0.000 intron (NM_001282765, intron 2 of 4) AluSx|SINE|Alu 7947 NM_001282765 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr17-8366 chr17 74380893 74381103 + 6.83 0.000 Intergenic Intergenic 13492 NM_001331076 350383 Hs.574368 NM_181790 ENSG00000257008 GPR142 GPRg1b|PGR2 G protein-coupled receptor 142 protein-coding chr18-1831 chr18 22037827 22038037 + 6.83 0.000 Intergenic L1M5|LINE|L1 131036 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA chr20-3772 chr20 20520989 20521199 + 6.83 0.000 exon (NM_020343, exon 31 of 40) exon (NM_020343, exon 31 of 40) 152990 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr1-11870 chr1 40579028 40579238 + 6.83 0.000 Intergenic L1PA6|LINE|L1 47496 NM_152373 127396 Hs.524767 NM_152373 ENSG00000117010 ZNF684 - zinc finger protein 684 protein-coding chr2-8530 chr2 131033074 131033284 + 6.83 0.000 intron (NM_001367493, intron 5 of 13) intron (NM_001367493, intron 5 of 13) 59983 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr6-5269 chr6 137941184 137941394 + 6.83 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 4511 NR_149097 105378020 Hs.520420 NR_149097 ENSG00000226004 LINC02528 - long intergenic non-protein coding RNA 2528 ncRNA chr1-9839 chr1 62971905 62972115 + 6.83 0.000 Intergenic MIRb|SINE|MIR 38915 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr6-8290 chr6 142897721 142897931 + 6.83 0.000 intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 47350 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr7-7452 chr7 85256697 85256907 + 6.83 0.000 Intergenic L1MC1|LINE|L1 -134871 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr17-5394 chr17 32513654 32513864 + 6.83 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 26766 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr11-4095 chr11 32894120 32894330 + 6.83 0.000 intron (NM_001076786, intron 1 of 12) intron (NM_001076786, intron 1 of 12) 1414 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr12-6235 chr12 32112959 32113169 + 6.83 0.000 intron (NR_148725, intron 1 of 9) MIRb|SINE|MIR 6217 NM_001354189 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr18-3224 chr18 47711714 47711924 + 6.83 0.000 Intergenic Intergenic 218840 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr5-6326 chr5 131769508 131769718 + 6.83 0.000 intron (NM_133372, intron 1 of 17) intron (NM_133372, intron 1 of 17) 27404 NM_001008738 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 - folliculin interacting protein 1 protein-coding chr21-1774 chr21 37149539 37149749 + 6.83 0.000 intron (NM_003316, intron 23 of 45) intron (NM_003316, intron 23 of 45) 44282 NR_046651 100874006 Hs.570411 NR_046651 ENSG00000228677 TTC3-AS1 - TTC3 antisense RNA 1 ncRNA chr6-7947 chr6 111301496 111301706 + 6.83 0.000 intron (NM_001286431, intron 34 of 34) MER5B|DNA|hAT-Charlie 42262 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr10-8683 chr10 101210848 101211058 + 6.83 0.000 Intergenic AluSq2|SINE|Alu 18007 NM_006562 10660 Hs.37128 NM_006562 ENSG00000138136 LBX1 HPX-6|HPX6|LBX1H|homeobox ladybird homeobox 1 protein-coding chr14-4993 chr14 76389182 76389392 + 6.83 0.000 intron (NM_004452, intron 1 of 10) L2c|LINE|L2 17940 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr8-4303 chr8 97598153 97598363 + 6.83 0.000 Intergenic Intergenic -45926 NM_001363137 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr3-9129 chr3 31240515 31240725 + 6.83 0.000 Intergenic Intergenic -78833 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr13-1939 chr13 94464835 94465045 + 6.83 0.000 intron (NM_001129889, intron 4 of 9) L2c|LINE|L2 14742 NM_001922 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr22-2969 chr22 50169020 50169230 + 6.83 0.000 Intergenic Intergenic -1606 NR_027691 56666 Hs.440092 NM_052839 ENSG00000073150 PANX2 PX2|hPANX2 pannexin 2 protein-coding chr21-1075 chr21 32010403 32010613 + 6.83 0.000 Intergenic MSTA|LTR|ERVL-MaLR 75787 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr10-5829 chr10 111927203 111927413 + 6.83 0.000 Intergenic MIRb|SINE|MIR 256457 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr9-5281 chr9 82808605 82808815 + 6.83 0.000 Intergenic Intergenic 254432 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr1-15398 chr1 151457349 151457559 + 6.83 0.000 intron (NM_001194938, intron 1 of 17) MER5A|DNA|hAT-Charlie 2040 NM_001194938 23126 Hs.489873 NM_015100 ENSG00000143442 POGZ MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m pogo transposable element derived with ZNF domain protein-coding chr7-4981 chr7 151985584 151985794 + 6.83 0.000 intron (NM_145292, intron 4 of 8) intron (NM_145292, intron 4 of 8) 29243 NM_145292 168391 Hs.647077 NM_145292 ENSG00000106648 GALNTL5 GALNACT19|GALNT15|GalNAc-T5L polypeptide N-acetylgalactosaminyltransferase like 5 protein-coding chr17-2994 chr17 72456494 72456704 + 6.83 0.000 intron (NR_036488, intron 1 of 3) MER113|DNA|hAT-Charlie 113788 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr10-2922 chr10 856783 856993 + 6.83 0.000 intron (NM_001351277, intron 5 of 17) L1MCa|LINE|L1 74817 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr4-6247 chr4 68187226 68187436 + 6.83 0.000 intron (NR_104048, intron 6 of 9) intron (NR_104048, intron 6 of 9) 5039 NR_015446 100130017 Hs.582037 NR_015446 ENSG00000250426 FTLP10 - ferritin light chain pseudogene 10 pseudo chr7-5632 chr7 54484159 54484369 + 6.83 0.000 Intergenic Intergenic -58061 NM_001301009 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding chr16-3049 chr16 55317114 55317324 + 6.83 0.000 Intergenic MIRc|SINE|MIR -7340 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr2-8232 chr2 96932033 96932243 + 6.83 0.000 intron (NM_001122646, intron 8 of 16) intron (NM_001122646, intron 8 of 16) 13032 NR_110209 101927053 Hs.677537 NR_110209 LOC101927053 - uncharacterized LOC101927053 ncRNA chr18-2679 chr18 57347864 57348074 + 6.83 0.000 Intergenic Intergenic -4588 NM_015879 51046 Hs.23172 NM_015879 ENSG00000177511 ST8SIA3 SIAT8C|ST8SiaIII ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 protein-coding chr9-7413 chr9 21535154 21535364 + 6.83 0.000 intron (NR_152877, intron 1 of 3) MER5B|DNA|hAT-Charlie -23074 NR_029505 407035 NR_029505 ENSG00000199177 MIR31 MIRN31|hsa-mir-31|miR-31 microRNA 31 ncRNA chr5-5179 chr5 110871773 110871983 + 6.83 0.000 Intergenic (CTTTT)n|Simple_repeat|Simple_repeat 132871 NM_138773 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding chr13-3671 chr13 33787384 33787594 + 6.83 0.000 Intergenic Intergenic -30580 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr1-14584 chr1 53550435 53550645 + 6.83 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 91141 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr21-1635 chr21 21997687 21997897 + 6.83 0.000 Intergenic L1M1|LINE|L1 100667 NR_109959 101927843 Hs.652879 NR_109959 ENSG00000233215 LINC01687 - long intergenic non-protein coding RNA 1687 ncRNA chr2-9745 chr2 77411495 77411705 + 6.83 0.000 intron (NR_146416, intron 1 of 1) AluY|SINE|Alu 110776 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr4-8191 chr4 133186790 133187000 + 6.83 0.000 intron (NM_032961, intron 4 of 4) AluSz6|SINE|Alu 37601 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr4-5673 chr4 19164679 19164889 + 6.83 0.000 Intergenic Intergenic -1087121 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr4-5104 chr4 148692636 148692846 + 6.83 0.000 Intergenic Intergenic -248043 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chrX-4442 chrX 55062773 55062983 + 6.83 0.000 Intergenic L1MA3|LINE|L1 -12152 NM_001015038 389860 Hs.293317 NM_001015038 ENSG00000238269 PAGE2B CT16.5|GAGEE3|PAGE-2B PAGE family member 2B protein-coding chr7-9269 chr7 124334319 124334529 + 6.83 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 17672 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr6-6251 chr6 33882010 33882220 + 6.83 0.000 Intergenic Intergenic 14792 NR_038989 100507584 Hs.547104 NR_038989 ENSG00000249346 LINC01016 - long intergenic non-protein coding RNA 1016 ncRNA chr1-8496 chr1 150449495 150449705 + 6.83 0.000 intron (NM_015203, intron 7 of 10) MLT1B|LTR|ERVL-MaLR -37819 NR_073513 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr1-14643 chr1 57807007 57807217 + 6.83 0.000 intron (NM_001353980, intron 3 of 5) L2b|LINE|L2 -53469 NR_104362 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr9-8347 chr9 116550772 116550982 + 6.83 0.000 intron (NR_033973, intron 8 of 11) intron (NR_033973, intron 8 of 11) 46594 NR_033973 100128505 Hs.675821 NR_033973 ENSG00000229105 ASTN2-AS1 - ASTN2 antisense RNA 1 ncRNA chr11-8907 chr11 16464541 16464751 + 6.83 0.000 intron (NM_001367872, intron 3 of 16) intron (NM_001367872, intron 3 of 16) 11742 NM_033326 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr18-2079 chr18 48990229 48990439 + 6.83 0.000 Intergenic Intergenic -33369 NR_148999 100129878 Hs.437704 NR_148999 ENSG00000264269 LOC100129878 - uncharacterized LOC100129878 ncRNA chr4-4469 chr4 55298494 55298704 + 6.83 0.000 Intergenic L1PA6|LINE|L1 -47643 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding chr18-2125 chr18 54235896 54236106 + 6.83 0.000 Intergenic Intergenic -11332 NM_015832 8932 Hs.25674 NM_003927 ENSG00000134046 MBD2 DMTase|NY-CO-41 methyl-CpG binding domain protein 2 protein-coding chr7-9676 chr7 152696232 152696442 + 6.83 0.000 Intergenic L1MB1|LINE|L1 -20196 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr4-8002 chr4 116358189 116358399 + 6.83 0.000 Intergenic HERVL18-int|LTR|ERVL 58569 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr1-5678 chr1 44784116 44784326 + 6.83 0.000 exon (NM_153274, exon 9 of 9) exon (NM_153274, exon 9 of 9) 3949 NM_153274 266675 Hs.302513 NM_153274 ENSG00000142959 BEST4 VMD2L2 bestrophin 4 protein-coding chr1-11235 chr1 246795127 246795337 + 6.83 0.000 Intergenic Intergenic 5615 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr15-1368 chr15 78944142 78944352 + 6.83 0.000 intron (NM_001319137, intron 1 of 12) intron (NM_001319137, intron 1 of 12) 851 NM_004390 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr12-1747 chr12 57456153 57456363 + 6.83 0.000 exon (NM_031479, exon 2 of 2) exon (NM_031479, exon 2 of 2) 951 NM_031479 83729 Hs.632713 NM_031479 ENSG00000139269 INHBE - inhibin subunit beta E protein-coding chr8-2394 chr8 55440915 55441125 + 6.83 0.000 intron (NM_052898, intron 2 of 2) AluJb|SINE|Alu 14301 NR_027765 100133234 Hs.729852 NR_027765 ENSG00000248522 SBF1P1 - SET binding factor 1 pseudogene 1 pseudo chrX-3304 chrX 114913181 114913391 + 6.83 0.000 Intergenic MER21C|LTR|ERVL 89832 NR_029955 554212 NR_029955 ENSG00000199001 MIR448 MIRN448|hsa-mir-448|miRNA448 microRNA 448 ncRNA chr12-6537 chr12 112035511 112035721 + 6.83 0.000 intron (NM_024953, intron 22 of 23) intron (NM_024953, intron 22 of 23) 2099 NR_037430 100500889 NR_037430 ENSG00000266370 MIR3657 - microRNA 3657 ncRNA chr1-15145 chr1 103818775 103818985 + 6.83 0.000 Intergenic AluJb|SINE|Alu 69039 NM_001008218 277 Hs.599274 NM_001008218 ENSG00000174876 AMY1B AMY1 amylase alpha 1B (salivary) protein-coding chr12-4793 chr12 54377221 54377431 + 6.83 0.000 intron (NM_015481, intron 1 of 6) intron (NM_015481, intron 1 of 6) 7407 NM_001290001 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr1-14579 chr1 53474831 53475041 + 6.83 0.000 Intergenic Intergenic 15537 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr3-7878 chr3 128066217 128066427 + 6.83 0.000 intron (NM_001319086, intron 9 of 9) intron (NM_001319086, intron 9 of 9) -9488 NR_046645 100874089 Hs.581603 NR_046645 ENSG00000239608 RUVBL1-AS1 - RUVBL1 antisense RNA 1 ncRNA chr3-9393 chr3 47916167 47916377 + 6.83 0.000 exon (NM_001134364, exon 7 of 18) exon (NM_001134364, exon 7 of 18) 66717 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr10-3193 chr10 91872877 91873087 + 6.83 0.000 Intergenic AluJb|SINE|Alu 36504 NM_152429 143282 Hs.466120 NM_152429 ENSG00000174721 FGFBP3 C10orf13|FGF-BP3 fibroblast growth factor binding protein 3 protein-coding chr5-6288 chr5 114239243 114239453 + 6.83 0.000 Intergenic Intergenic -122722 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chrX-3084 chrX 130079981 130080191 + 6.83 0.000 intron (NM_001127197, intron 2 of 8) MIR3|SINE|MIR 30414 NM_001421 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr2-10263 chr2 120952469 120952679 + 6.83 0.000 intron (NM_005270, intron 4 of 13) intron (NM_005270, intron 4 of 13) 160293 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr6-5470 chr6 160344918 160345128 + 6.83 0.000 Intergenic Intergenic -3355 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr6-8415 chr6 151107791 151108001 + 6.83 0.000 Intergenic Intergenic 5221 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr3-5537 chr3 1754909 1755119 + 6.83 0.000 Intergenic MER11A|LTR|ERVK -343789 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr2-14589 chr2 232400126 232400336 + 6.83 0.000 Intergenic L1MD2|LINE|L1 -6613 NM_031313 251 Hs.333509 NM_031313 ENSG00000163286 ALPG ALPPL|ALPPL2|GCAP alkaline phosphatase, germ cell protein-coding chr2-11444 chr2 225177153 225177363 + 6.83 0.000 Intergenic Intergenic -134790 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr10-8829 chr10 110016075 110016285 + 6.83 0.000 intron (NM_001121, intron 1 of 13) AmnSINE1|SINE|5S-Deu-L2 -7799 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr1-10316 chr1 151779353 151779563 + 6.83 0.000 intron (NM_001083965, intron 4 of 12) intron (NM_001083965, intron 4 of 12) 11042 NM_006862 11022 Hs.144439 NM_006862 ENSG00000182134 TDRKH TDRD2 tudor and KH domain containing protein-coding chr3-10852 chr3 167343627 167343837 + 6.83 0.000 intron (NM_001199202, intron 9 of 20) L1MB7|LINE|L1 36551 NM_001199202 79740 Hs.478143 NM_024687 ENSG00000169064 ZBBX - zinc finger B-box domain containing protein-coding chr9-5313 chr9 86453760 86453970 + 6.83 0.000 Intergenic Intergenic -99455 NM_001185074 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr12-2511 chr12 89291670 89291880 + 6.83 0.000 Intergenic Intergenic 60726 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr6-4650 chr6 49827230 49827440 + 6.83 0.000 Intergenic L1MDa|LINE|L1 -2569 NR_110843 101927048 Hs.742154 NR_110843 LOC101927048 - uncharacterized LOC101927048 ncRNA chr6-3885 chr6 56821259 56821469 + 6.83 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 22301 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr1-10335 chr1 153488899 153489109 + 6.83 0.000 Intergenic Intergenic -28353 NM_002963 6278 Hs.112408 NM_002963 ENSG00000143556 S100A7 PSOR1|S100A7c S100 calcium binding protein A7 protein-coding chr17-5095 chr17 4636047 4636257 + 6.83 0.000 intron (NM_001140, intron 7 of 13) intron (NM_001140, intron 7 of 13) 5526 NM_001140 246 Hs.73809 NM_001140 ENSG00000161905 ALOX15 12-LOX|15-LOX|15-LOX-1|LOG15 arachidonate 15-lipoxygenase protein-coding chr7-5531 chr7 45149644 45149854 + 6.83 0.000 Intergenic Intergenic -8042 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr1-8609 chr1 188751277 188751487 + 6.83 0.000 Intergenic LTR5_Hs|LTR|ERVK 1307754 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr9-6620 chr9 130284463 130284673 + 6.83 0.000 intron (NM_001291815, intron 1 of 97) intron (NM_001291815, intron 1 of 97) 18808 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr5-7217 chr5 8512513 8512723 + 6.83 0.000 Intergenic MSTA|LTR|ERVL-MaLR 51693 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr8-2528 chr8 23892611 23892821 + 6.83 0.000 Intergenic Intergenic -37910 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr19-6487 chr19 17652057 17652267 + 6.83 0.000 intron (NM_001080421, intron 12 of 41) AluSx1|SINE|Alu 36037 NM_001080421 23025 Hs.164502 NM_001080421 ENSG00000130477 UNC13A Munc13-1 unc-13 homolog A protein-coding chr1-15905 chr1 184373158 184373368 + 6.83 0.000 Intergenic LTR16B2|LTR|ERVL -13766 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr6-6627 chr6 151179469 151179679 + 6.83 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 48883 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr16-6491 chr16 58668497 58668707 + 6.83 0.000 intron (NM_001369610, intron 8 of 8) AluSq2|SINE|Alu 15729 NM_001369611 55238 Hs.10499 NM_018231 ENSG00000103042 SLC38A7 SNAT7 solute carrier family 38 member 7 protein-coding chr5-8296 chr5 114395649 114395859 + 6.83 0.000 intron (NM_001278204, intron 2 of 6) intron (NM_001278204, intron 2 of 6) 33435 NM_001278204 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr1-15597 chr1 160717988 160718198 + 6.83 0.000 Intergenic MER50-int|LTR|ERV1 -6242 NM_001256030 962 Hs.243564 NM_001778 ENSG00000117091 CD48 BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48 CD48 molecule protein-coding chr7-8407 chr7 45655567 45655777 + 6.83 0.000 intron (NM_001281768, intron 6 of 9) intron (NM_001281768, intron 6 of 9) 81304 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr16-6108 chr16 13649187 13649397 + 6.83 0.000 Intergenic AluSq2|SINE|Alu -270865 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr13-3358 chr13 76073454 76073664 + 6.83 0.000 Intergenic MER21A|LTR|ERVL -138427 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr3-8905 chr3 12729203 12729413 + 6.83 0.000 Intergenic Intergenic 29951 NM_001284407 55287 Hs.475502 NM_018306 ENSG00000088726 TMEM40 - transmembrane protein 40 protein-coding chr4-8022 chr4 118327613 118327823 + 6.83 0.000 intron (NM_003619, intron 4 of 12) intron (NM_003619, intron 4 of 12) 25285 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr17-3690 chr17 15291992 15292202 + 6.83 0.000 Intergenic Intergenic -26771 NR_104017 5376 Hs.372031 NM_000304 ENSG00000109099 PMP22 CIDP|CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110 peripheral myelin protein 22 protein-coding chrX-1568 chrX 56728938 56729148 + 6.83 0.000 promoter-TSS (NM_001348129) promoter-TSS (NM_001348129) -200 NM_001348129 550643 Hs.355559 NM_001348129 ENSG00000204272 NBDY LINC01420|NoBody negative regulator of P-body association protein-coding chr12-8177 chr12 122035049 122035259 + 6.83 0.000 intron (NM_001024808, intron 2 of 5) intron (NM_001024808, intron 2 of 5) 13270 NM_020993 605 Hs.530970 NM_020993 ENSG00000110987 BCL7A BCL7 BAF chromatin remodeling complex subunit BCL7A protein-coding chr7-5307 chr7 25402468 25402678 + 6.83 0.000 Intergenic Intergenic -174087 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr8-4858 chr8 40978323 40978533 + 6.83 0.000 Intergenic Intergenic -80602 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr8-3063 chr8 16833554 16833764 + 6.83 0.000 Intergenic L2c|LINE|L2 168686 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr1-13245 chr1 219791363 219791573 + 6.83 0.000 Intergenic Intergenic 137183 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr3-9931 chr3 88112315 88112525 + 6.83 0.000 intron (NM_001350135, intron 2 of 6) intron (NM_001350135, intron 2 of 6) 37446 NM_001195308 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding chr1-15286 chr1 116026699 116026909 + 6.83 0.000 intron (NM_018420, intron 4 of 11) intron (NM_018420, intron 4 of 11) -49528 NR_125970 101928977 Hs.627914 NR_125970 LOC101928977 - uncharacterized LOC101928977 ncRNA chr15-3630 chr15 77980008 77980218 + 6.83 0.000 Intergenic Intergenic 14112 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr2-12383 chr2 53216135 53216345 + 6.83 0.000 Intergenic L1PA8|LINE|L1 -513625 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr5-6759 chr5 81355409 81355619 + 6.83 0.000 intron (NM_130767, intron 5 of 14) L1MA2|LINE|L1 38620 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr1-14251 chr1 36688408 36688618 + 6.83 0.000 Intergenic Intergenic -205199 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr5-6761 chr5 82252313 82252523 + 6.83 0.000 intron (NM_031482, intron 5 of 7) intron (NM_031482, intron 5 of 7) 25936 NM_001025 6228 Hs.527193 NM_001025 ENSG00000186468 RPS23 BTDD|MABAS|MCINS|PAMAS|S23|uS12 ribosomal protein S23 protein-coding chr5-3812 chr5 93620587 93620797 + 6.83 0.000 promoter-TSS (NR_031754) promoter-TSS (NR_031754) 96 NR_031754 100313887 NR_031754 ENSG00000284336 MIR2277 mir-2277 microRNA 2277 ncRNA chr5-7619 chr5 45180965 45181175 + 6.83 0.000 Intergenic MER50|LTR|ERV1 372123 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr1-8287 chr1 40817716 40817926 + 6.83 0.000 intron (NM_004700, intron 2 of 13) intron (NM_004700, intron 2 of 13) 34034 NM_172163 9132 Hs.473058 NM_004700 ENSG00000117013 KCNQ4 DFNA2|DFNA2A|KV7.4 potassium voltage-gated channel subfamily Q member 4 protein-coding chr8-3326 chr8 32779632 32779842 + 6.83 0.000 Intergenic Intergenic 57902 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr3-7782 chr3 77239450 77239660 + 6.83 0.000 intron (NM_001290039, intron 2 of 26) LTR12C|LTR|ERV1 141543 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr1-14356 chr1 41642028 41642238 + 6.83 0.000 intron (NM_001127714, intron 1 of 7) intron (NM_001127714, intron 1 of 7) -157450 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr22-2006 chr22 29870571 29870781 + 6.83 0.000 Intergenic Intergenic -12493 NM_153050 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding chr15-3360 chr15 83972746 83972956 + 6.83 0.000 intron (NM_207517, intron 20 of 29) intron (NM_207517, intron 20 of 29) -107336 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr10-5948 chr10 122103967 122104177 + 6.83 0.000 intron (NM_001291877, intron 5 of 19) L2a|LINE|L2 -8813 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr2-8270 chr2 101064983 101065193 + 6.83 0.000 intron (NM_001102426, intron 2 of 19) intron (NM_001102426, intron 2 of 19) 62799 NM_000993 6160 Hs.469473 NM_000993 ENSG00000071082 RPL31 L31 ribosomal protein L31 protein-coding chr6-3171 chr6 124366724 124366934 + 6.83 0.000 intron (NM_153355, intron 3 of 5) AluJb|SINE|Alu 83824 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr10-8768 chr10 104537306 104537516 + 6.83 0.000 Intergenic L1MA8|LINE|L1 -57136 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr2-10032 chr2 27608001 27608211 + 6.83 0.000 intron (NM_001271289, intron 9 of 12) intron (NM_001271289, intron 9 of 12) -20542 NM_001145047 11321 Hs.18259 NM_007266 ENSG00000198522 GPN1 ATPBD1A|MBDIN|NTPBP|RPAP4|XAB1 GPN-loop GTPase 1 protein-coding chr7-7647 chr7 140454560 140454770 + 6.83 0.000 non-coding (NR_117084, exon 6 of 6) non-coding (NR_117084, exon 6 of 6) 24840 NM_013446 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chrX-3685 chrX 107484328 107484538 + 6.83 0.000 Intergenic Intergenic -38017 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr4-7213 chr4 42158572 42158782 + 6.83 0.000 Intergenic LTR17|LTR|ERV1 -6022 NM_207406 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr10-8985 chr10 120213589 120213799 + 6.83 0.000 Intergenic Intergenic 141529 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr11-6800 chr11 90925187 90925397 + 6.83 0.000 Intergenic Intergenic -56090 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr19-3393 chr19 14866489 14866699 + 6.83 0.000 Intergenic AluSx3|SINE|Alu 14761 NM_030901 26333 Hs.247717 NM_030901 ENSG00000185385 OR7A17 BC85395_4|HTPCRX19 olfactory receptor family 7 subfamily A member 17 protein-coding chr4-8572 chr4 167852940 167853150 + 6.83 0.000 Intergenic L2c|LINE|L2 -239492 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr6-8401 chr6 150580444 150580654 + 6.83 0.000 Intergenic Intergenic -19336 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr2-13926 chr2 183206541 183206751 + 6.83 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 82203 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr13-3513 chr13 21697406 21697616 + 6.83 0.000 intron (NM_002010, intron 2 of 2) intron (NM_002010, intron 2 of 2) 26438 NM_002010 2254 Hs.111 NM_002010 ENSG00000102678 FGF9 FGF-9|GAF|HBFG-9|HBGF-9|SYNS3 fibroblast growth factor 9 protein-coding chr3-8774 chr3 4320779 4320989 + 6.83 0.000 Intergenic LTR48|LTR|ERV1 17580 NM_001320676 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr11-4510 chr11 117042564 117042774 + 6.83 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 55759 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr16-5023 chr16 50374824 50375034 + 6.83 0.000 Intergenic Intergenic -5941 NM_001173984 29117 Hs.437894 NM_013263 ENSG00000166164 BRD7 BP75|CELTIX1|NAG4 bromodomain containing 7 protein-coding chr13-1814 chr13 51934094 51934304 + 6.83 0.000 3' UTR (NM_001330579, exon 19 of 19) 3' UTR (NM_001330579, exon 19 of 19) 72230 NM_001346075 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr8-5838 chr8 5751271 5751481 + 6.83 0.000 Intergenic Intergenic 655172 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr3-10274 chr3 124521311 124521521 + 6.83 0.000 intron (NM_001024660, intron 33 of 59) MIR3|SINE|MIR -63242 NM_001322995 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chrX-3189 chrX 41396495 41396705 + 6.83 0.000 Intergenic Intergenic -50860 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr19-5687 chr19 10607454 10607664 + 6.83 0.000 intron (NM_001145056, intron 1 of 21) AluJo|SINE|Alu 5104 NM_001145056 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr3-10951 chr3 176350385 176350595 + 6.83 0.000 Intergenic MLT2A2|LTR|ERVL 105939 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA chr17-8322 chr17 72326247 72326457 + 6.83 0.000 Intergenic L2b|LINE|L2 -16459 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr21-1812 chr21 39463581 39463791 + 6.83 0.000 intron (NM_001317740, intron 2 of 5) MER58B|DNA|hAT-Charlie 11832 NM_007341 6450 Hs.473847 NM_007341 ENSG00000185437 SH3BGR 21-GARP SH3 domain binding glutamate rich protein protein-coding chr7-6927 chr7 80809120 80809330 + 6.83 0.000 intron (NM_006379, intron 6 of 17) intron (NM_006379, intron 6 of 17) 109826 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr3-9769 chr3 70407443 70407653 + 6.83 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -94910 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr5-4865 chr5 64707085 64707295 + 6.83 0.000 intron (NM_001164442, intron 2 of 2) MER4-int|LTR|ERV1 16687 NM_001164442 100132916 Hs.591776 NM_001164442 ENSG00000145642 SHISAL2B FAM159B shisa like 2B protein-coding chr2-14830 chr2 241606871 241607081 + 6.83 0.000 intron (NM_015963, intron 2 of 5) intron (NM_015963, intron 2 of 5) 10525 NM_001164356 51078 Hs.435759 NM_015963 ENSG00000176946 THAP4 CGI-36|Nb(III)|PP238 THAP domain containing 4 protein-coding chr18-3270 chr18 51168133 51168343 + 6.83 0.000 Intergenic MIRb|SINE|MIR 29443 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr22-3695 chr22 24426376 24426586 + 6.83 0.000 intron (NM_001278500, intron 1 of 2) intron (NM_001278500, intron 1 of 2) -1118 NM_000675 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chr5-9103 chr5 172999397 172999607 + 6.83 0.000 intron (NM_003945, intron 2 of 3) AluJo|SINE|Alu 15731 NM_003945 8992 Hs.484188 NM_003945 ENSG00000113732 ATP6V0E1 ATP6H|ATP6V0E|M9.2|Vma21|Vma21p ATPase H+ transporting V0 subunit e1 protein-coding chr12-3702 chr12 3435218 3435428 + 6.83 0.000 intron (NM_001256536, intron 1 of 9) intron (NM_001256536, intron 1 of 9) 53974 NM_001256536 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr1-7526 chr1 165996203 165996413 + 6.83 0.000 Intergenic LTR79|LTR|ERVL 88387 NR_037431 100500832 NR_037431 ENSG00000283936 MIR3658 - microRNA 3658 ncRNA chr16-5961 chr16 4652636 4652846 + 6.83 0.000 exon (NM_001142289, exon 4 of 16) exon (NM_001142289, exon 4 of 16) -18577 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr5-4857 chr5 64227321 64227531 + 6.83 0.000 intron (NM_001113561, intron 5 of 7) intron (NM_001113561, intron 5 of 7) 61583 NM_001113561 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr8-2712 chr8 98402280 98402490 + 6.83 0.000 Intergenic Intergenic -8647 NR_162095 113218497 NR_162095 MIR9903 - microRNA 9903 ncRNA chr3-10299 chr3 126127755 126127965 + 6.83 0.000 intron (NR_072979, intron 13 of 20) intron (NR_072979, intron 13 of 20) 24220 NR_046602 100874204 Hs.742339 NR_046602 ENSG00000250218 ALDH1L1-AS1 - ALDH1L1 antisense RNA 1 ncRNA chr8-3549 chr8 124709730 124709940 + 6.83 0.000 intron (NM_001282971, intron 1 of 14) intron (NM_001282971, intron 1 of 14) 18638 NM_001363299 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr1-10941 chr1 211931063 211931273 + 6.83 0.000 Intergenic Intergenic 100207 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr1-11094 chr1 229071230 229071440 + 6.83 0.000 Intergenic Intergenic 103466 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-9491 chr7 136536149 136536359 + 6.83 0.000 Intergenic L1PA10|LINE|L1 -332398 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr15-3397 chr15 88966312 88966522 + 6.83 0.000 Intergenic AluSx1|SINE|Alu -53038 NM_005928 4240 Hs.3745 NM_005928 ENSG00000140545 MFGE8 BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47 milk fat globule-EGF factor 8 protein protein-coding chr9-6670 chr9 135486524 135486734 + 6.83 0.000 exon (NM_014811, exon 4 of 4) exon (NM_014811, exon 4 of 4) 6847 NM_014811 9858 Hs.533260 NM_014811 ENSG00000196422 PPP1R26 KIAA0649|NRBE3 protein phosphatase 1 regulatory subunit 26 protein-coding chr3-5789 chr3 26031953 26032163 + 6.83 0.000 Intergenic L1M5|LINE|L1 -158363 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr1-7431 chr1 44791216 44791426 + 6.83 0.000 Intergenic Intergenic -3151 NM_153274 266675 Hs.302513 NM_153274 ENSG00000142959 BEST4 VMD2L2 bestrophin 4 protein-coding chr6-1912 chr6 35275399 35275609 + 6.83 0.000 intron (NM_001292032, intron 1 of 12) intron (NM_001292032, intron 1 of 12) 15769 NM_001292032 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr8-6877 chr8 100804477 100804687 + 6.83 0.000 Intergenic MIRb|SINE|MIR -82494 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr15-3690 chr15 41123648 41123858 + 6.83 0.000 Intergenic AluY|SINE|Alu -7473 NM_017553 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr2-4051 chr2 112433581 112433791 + 6.83 0.000 promoter-TSS (NM_001164463) promoter-TSS (NM_001164463) -41 NM_001164463 727851 Hs.469630 NM_001164463 ENSG00000169629 RGPD8 RANBP2L1|RGP8|RanBP2alpha RANBP2 like and GRIP domain containing 8 protein-coding chr8-6758 chr8 91081528 91081738 + 6.83 0.000 intron (NM_001286745, intron 6 of 7) MIRc|SINE|MIR 11289 NM_001286745 51633 Hs.30532 NM_016023 ENSG00000155100 OTUD6B CGI-77|DUBA-5|DUBA5|IDDFSDA OTU domain containing 6B protein-coding chr9-4754 chr9 132260717 132260927 + 6.83 0.000 TTS (NM_001351528) TTS (NM_001351528) 94034 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr12-4154 chr12 83728818 83729028 + 6.83 0.000 Intergenic AluJr4|SINE|Alu 1041768 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr1-5959 chr1 29146939 29147149 + 6.83 0.000 TTS (NM_005626) TTS (NM_005626) -23141 NM_001003682 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr7-5469 chr7 41255338 41255548 + 6.83 0.000 Intergenic (TGTG)n|Simple_repeat|Simple_repeat 153839 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr12-6535 chr12 111645921 111646131 + 6.83 0.000 intron (NM_006768, intron 11 of 11) AluJo|SINE|Alu 39930 NM_006768 8315 Hs.530940 NM_006768 ENSG00000089234 BRAP BRAP2|IMP|RNF52 BRCA1 associated protein protein-coding chr17-7414 chr17 9766112 9766322 + 6.83 0.000 Intergenic Intergenic 25375 NM_001105571 201140 Hs.61684 NM_001105571 ENSG00000184544 DHRS7C SDR32C2 dehydrogenase/reductase 7C protein-coding chr3-8343 chr3 74489200 74489410 + 6.83 0.000 intron (NM_020872, intron 2 of 21) intron (NM_020872, intron 2 of 21) 31835 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr8-1656 chr8 19408370 19408580 + 6.83 0.000 intron (NM_001130518, intron 9 of 9) (T)n|Simple_repeat|Simple_repeat 94499 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr2-13813 chr2 175272446 175272656 + 6.83 0.000 Intergenic Intergenic -90841 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr5-7950 chr5 80351580 80351790 + 6.83 0.000 non-coding (NR_003665, exon 1 of 1) non-coding (NR_003665, exon 1 of 1) 281 NR_003665 441089 Hs.568291 NR_003665 CRSP8P - mediator complex subunit 27 pseudogene pseudo chr20-2503 chr20 33754520 33754730 + 6.83 0.000 intron (NM_001282933, intron 5 of 14) intron (NM_001282933, intron 5 of 14) 22629 NM_001282933 84905 Hs.516989 NM_032819 ENSG00000131061 ZNF341 HIES3 zinc finger protein 341 protein-coding chr8-6052 chr8 24833029 24833239 + 6.83 0.000 Intergenic L2a|LINE|L2 -80627 NM_005382 4741 Hs.458657 NM_005382 ENSG00000104722 NEFM NEF3|NF-M|NFM neurofilament medium protein-coding chr22-2587 chr22 29663524 29663734 + 6.83 0.000 intron (NR_156186, intron 9 of 16) intron (NR_156186, intron 9 of 16) -56374 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr17-5993 chr17 77648088 77648298 + 6.83 0.000 Intergenic L1MC3|LINE|L1 80366 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr1-13204 chr1 208864606 208864816 + 6.83 0.000 Intergenic LTR16C|LTR|ERVL -107743 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr5-3971 chr5 11082222 11082432 + 6.83 0.000 intron (NM_001288715, intron 15 of 20) intron (NM_001288715, intron 15 of 20) -321093 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr12-7270 chr12 52448668 52448878 + 6.83 0.000 intron (NM_005555, intron 6 of 8) intron (NM_005555, intron 6 of 8) 3373 NM_005555 3854 Hs.708950 NM_005555 ENSG00000185479 KRT6B CK-6B|CK6B|K6B|KRTL1|PC2|PC4 keratin 6B protein-coding chr6-5416 chr6 156146095 156146305 + 6.83 0.000 Intergenic Intergenic 199403 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr1-14431 chr1 45334661 45334871 + 6.83 0.000 intron (NM_012222, intron 1 of 15) intron (NM_012222, intron 1 of 15) 5191 NM_001293195 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr13-3187 chr13 110888525 110888735 + 6.83 0.000 intron (NR_104587, intron 5 of 6) intron (NR_104587, intron 5 of 6) -18322 NR_027701 283487 Hs.245390 NM_178514 ENSG00000255874 LINC00346 C13orf29|NCRNA00346 long intergenic non-protein coding RNA 346 ncRNA chr8-3142 chr8 69765941 69766151 + 6.83 0.000 intron (NM_001146009, intron 1 of 7) L2a|LINE|L2 67123 NM_001146009 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr3-9705 chr3 65788434 65788644 + 6.83 0.000 intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -105277 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr13-1482 chr13 105265734 105265944 + 6.83 0.000 Intergenic L1MB3|LINE|L1 -200028 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr17-3494 chr17 48742842 48743052 + 6.83 0.000 Intergenic MIRc|SINE|MIR -14198 NM_006361 10481 Hs.66731 NM_006361 ENSG00000159184 HOXB13 HPC9|PSGD homeobox B13 protein-coding chr4-7843 chr4 101942347 101942557 + 6.83 0.000 intron (NM_017935, intron 7 of 16) intron (NM_017935, intron 7 of 16) 128610 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr9-7965 chr9 91943786 91943996 + 6.83 0.000 intron (NM_001318204, intron 1 of 7) L1M3|LINE|L1 6337 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr11-9641 chr11 66539122 66539332 + 6.83 0.000 3' UTR (NM_207340, exon 3 of 3) 3' UTR (NM_207340, exon 3 of 3) 6821 NM_207340 254359 Hs.209587 NM_207340 ENSG00000174165 ZDHHC24 - zinc finger DHHC-type containing 24 protein-coding chr4-8218 chr4 136609642 136609852 + 6.83 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -584009 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr10-2321 chr10 57591368 57591578 + 6.83 0.000 Intergenic AluY|SINE|Alu -286914 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr9-8678 chr9 130486484 130486694 + 6.83 0.000 intron (NM_054012, intron 11 of 14) intron (NM_054012, intron 11 of 14) 41628 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr3-5919 chr3 42472728 42472938 + 6.83 0.000 Intergenic Intergenic -16466 NM_001251882 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr3-5678 chr3 13264003 13264213 + 6.83 0.000 Intergenic Intergenic 156214 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr5-2796 chr5 938141 938351 + 6.83 0.000 Intergenic Intergenic 45362 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr22-2560 chr22 27064955 27065165 + 6.83 0.000 Intergenic MIR|SINE|MIR -4542 NM_001318329 284898 Hs.350813 NM_001318329 LOC284898 - uncharacterized LOC284898 protein-coding chr5-2750 chr5 140591976 140592186 + 6.83 0.000 Intergenic Intergenic -27477 NM_133174 10307 Hs.529449 NM_006051 ENSG00000113108 APBB3 FE65L2|SRA amyloid beta precursor protein binding family B member 3 protein-coding chr9-5564 chr9 111233567 111233777 + 6.83 0.000 Intergenic Intergenic 37542 NR_106989 102465800 NR_106989 ENSG00000274263 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA chr11-3235 chr11 70904012 70904222 + 6.83 0.000 intron (NM_012309, intron 9 of 24) intron (NM_012309, intron 9 of 24) -31749 NR_037437 100500844 NR_037437 ENSG00000263744 MIR3664 mir-3664 microRNA 3664 ncRNA chr3-7702 chr3 47742452 47742662 + 6.83 0.000 intron (NM_003074, intron 3 of 27) intron (NM_003074, intron 3 of 27) 39336 NM_003074 6599 Hs.476179 NM_003074 ENSG00000173473 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding chr12-4365 chr12 3797669 3797879 + 6.83 0.000 Intergenic MER74B|LTR|ERVL -44665 NM_032680 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr2-13411 chr2 141498593 141498803 + 6.83 0.000 intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 633003 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr2-8494 chr2 127594876 127595086 + 6.83 0.000 intron (NM_001080527, intron 18 of 46) L1P3|LINE|L1 -24019 NR_132317 105373609 Hs.677195 NR_132317 LOC105373609 - uncharacterized LOC105373609 ncRNA chr4-7241 chr4 45849893 45850103 + 6.83 0.000 Intergenic AluJo|SINE|Alu 274056 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr11-10735 chr11 132407055 132407265 + 6.83 0.000 Intergenic Intergenic 122858 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr5-7924 chr5 78569938 78570148 + 6.83 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 78729 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr11-3314 chr11 107578648 107578858 + 6.83 0.000 Intergenic Intergenic -12338 NM_001130037 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr14-4684 chr14 56856360 56856570 + 6.83 0.000 intron (NR_146411, intron 2 of 2) intron (NR_146411, intron 2 of 2) 43307 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA chr13-3877 chr13 51591687 51591897 + 6.83 0.000 intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 7330 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr6-4376 chr6 21829381 21829591 + 6.83 0.000 intron (NR_015410, intron 4 of 11) intron (NR_015410, intron 4 of 11) 163073 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr4-6017 chr4 1058509 1058719 + 6.83 0.000 intron (NM_001366918, intron 9 of 10) intron (NM_001366918, intron 9 of 10) 46150 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr6-6525 chr6 129731882 129732092 + 6.83 0.000 Intergenic MIR1_Amn|SINE|MIR -21810 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr4-5919 chr4 144880737 144880947 + 6.83 0.000 Intergenic Intergenic 216540 NM_001318367 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr1-16647 chr1 240566643 240566853 + 6.83 0.000 intron (NM_022469, intron 1 of 1) L1MEc|LINE|L1 45407 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr17-3719 chr17 18938962 18939172 + 6.83 0.000 Intergenic L1MC1|LINE|L1 -11609 NM_001282417 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr5-6604 chr5 34426834 34427044 + 6.83 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -182215 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr12-8279 chr12 125519535 125519745 + 6.83 0.000 intron (NM_052907, intron 4 of 8) intron (NM_052907, intron 4 of 8) -102812 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr12-4688 chr12 48643360 48643570 + 6.83 0.000 Intergenic Intergenic 11053 NR_002968 677815 Hs.689717 NR_002968 ENSG00000221491 SNORA2C ACA34|MIR1291|SNORA34 small nucleolar RNA, H/ACA box 2C snoRNA chr5-5259 chr5 120852484 120852694 + 6.83 0.000 Intergenic Intergenic 321125 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr2-7169 chr2 203951083 203951293 + 6.83 0.000 intron (NM_012092, intron 1 of 4) intron (NM_012092, intron 1 of 4) 14440 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr11-5319 chr11 49127525 49127735 + 6.83 0.000 Intergenic Intergenic -68518 NM_001206631 646754 Hs.740240 NM_001206631 ENSG00000214891 TRIM64C - tripartite motif containing 64C protein-coding chr7-6793 chr7 26147748 26147958 + 6.83 0.000 Intergenic SVA_D|Retroposon|SVA -4345 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr2-4045 chr2 111430852 111431062 + 6.83 0.000 intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 64204 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr4-3859 chr4 129157198 129157408 + 6.83 0.000 Intergenic Intergenic 61151 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr1-12556 chr1 29360200 29360410 + 6.83 0.000 Intergenic MIRb|SINE|MIR -10191 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr15-5130 chr15 89991808 89992018 + 6.83 0.000 Intergenic AluSx3|SINE|Alu -9411 NM_198526 374655 Hs.459311 NM_198526 ENSG00000140548 ZNF710 - zinc finger protein 710 protein-coding chr1-16609 chr1 238338117 238338327 + 6.83 0.000 Intergenic L1MD3|LINE|L1 147795 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr17-3148 chr17 48814537 48814747 + 6.83 0.000 intron (NM_001130918, intron 1 of 15) intron (NM_001130918, intron 1 of 15) 2448 NM_001366314 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr8-6028 chr8 23411401 23411611 + 6.83 0.000 Intergenic Intergenic -7386 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr1-13699 chr1 14169857 14170067 + 6.83 0.000 Intergenic Intergenic 250011 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chrX-4720 chrX 88701153 88701363 + 6.83 0.000 Intergenic L1PA10|LINE|L1 -45967 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr1-11592 chr1 206771552 206771762 + 6.83 0.000 intron (NM_000572, intron 1 of 4) intron (NM_000572, intron 1 of 4) 837 NM_000572 3586 Hs.193717 NM_000572 ENSG00000136634 IL10 CSIF|GVHDS|IL-10|IL10A|TGIF interleukin 10 protein-coding chr2-8505 chr2 128537222 128537432 + 6.83 0.000 Intergenic LTR49-int|LTR|ERV1 -218459 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr11-10600 chr11 124194834 124195044 + 6.83 0.000 Intergenic Intergenic 9723 NM_001355213 26497 Hs.538726 NM_001355213 ENSG00000197309 OR10D3 HTPCRX09|OR10D3P olfactory receptor family 10 subfamily D member 3 (putative) protein-coding chr14-2583 chr14 49319629 49319839 + 6.83 0.000 Intergenic Intergenic 266646 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr13-1663 chr13 73598144 73598354 + 6.83 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 34005 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr10-8807 chr10 108152922 108153132 + 6.83 0.000 Intergenic LTR48|LTR|ERV1 -83734 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr21-1752 chr21 35113967 35114177 + 6.83 0.000 Intergenic L1M5|LINE|L1 -64774 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr13-1675 chr13 75931426 75931636 + 6.83 0.000 TTS (NR_047491) TTS (NR_047491) 3601 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr10-8104 chr10 69200285 69200495 + 6.83 0.000 exon (NM_001301683, exon 12 of 16) exon (NM_001301683, exon 12 of 16) -19942 NM_025130 80201 Hs.522988 NM_025130 ENSG00000156510 HKDC1 - hexokinase domain containing 1 protein-coding chr7-5530 chr7 45120636 45120846 + 6.83 0.000 Intergenic AluSc8|SINE|Alu -8994 NM_001261834 9238 Hs.231411 NM_004749 ENSG00000136270 TBRG4 CPR2|FASTKD4 transforming growth factor beta regulator 4 protein-coding chr15-4938 chr15 78091893 78092103 + 6.83 0.000 promoter-TSS (NM_001101404) promoter-TSS (NM_001101404) -587 NM_001101404 646892 Hs.569511 NM_001101404 ENSG00000183476 SH2D7 - SH2 domain containing 7 protein-coding chr7-6007 chr7 104663643 104663853 + 6.83 0.000 intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 140344 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr17-7623 chr17 28034301 28034511 + 6.83 0.000 Intergenic Plat_L3|LINE|CR1 -8271 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr11-8675 chr11 3972203 3972413 + 6.83 0.000 intron (NM_001277962, intron 2 of 12) intron (NM_001277962, intron 2 of 12) 116246 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr2-11770 chr2 12764443 12764653 + 6.83 0.000 Intergenic Intergenic 27181 NR_036072 100422986 NR_036072 ENSG00000264370 MIR3125 mir-3125 microRNA 3125 ncRNA chr5-8843 chr5 151420282 151420492 + 6.83 0.000 Intergenic MIRc|SINE|MIR -16659 NM_001308151 206358 Hs.269004 NM_078483 ENSG00000123643 SLC36A1 Dct1|LYAAT1|PAT1|TRAMD3 solute carrier family 36 member 1 protein-coding chr4-7362 chr4 58657326 58657536 + 6.83 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -121103 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr19-5767 chr19 24182768 24182978 + 6.83 0.000 Intergenic BSR/Beta|Satellite|Satellite -19426 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo chr12-7682 chr12 88309042 88309252 + 6.83 0.000 Intergenic Intergenic 166840 NR_159381 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding chr8-4640 chr8 134282997 134283207 + 6.83 0.000 Intergenic Intergenic -314969 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr18-3441 chr18 65721590 65721800 + 6.83 0.000 Intergenic L1MB4|LINE|L1 -28557 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr6-8372 chr6 149436538 149436748 + 6.83 0.000 Intergenic Intergenic 36381 NM_001002255 387082 Hs.657168 NM_001002255 ENSG00000177688 SUMO4 IDDM5|SMT3H4|SUMO-4|dJ281H8.4 small ubiquitin like modifier 4 protein-coding chr22-3851 chr22 32785760 32785970 + 6.83 0.000 intron (NM_003490, intron 6 of 13) L2a|LINE|L2 -14951 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr10-5201 chr10 61026572 61026782 + 6.83 0.000 TTS (NR_108052) TTS (NR_108052) 10402 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr18-3043 chr18 28063359 28063569 + 6.83 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) -26823 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr8-7312 chr8 133173218 133173428 + 6.83 0.000 Intergenic Ricksha_b|DNA|MULE-MuDR -17716 NR_037944 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr19-5280 chr19 56273948 56274158 + 6.83 0.000 intron (NM_001354658, intron 1 of 10) L2b|LINE|L2 1305 NM_001354658 100506374 Hs.631532 NM_001354658 ENSG00000267710 EDDM13 - epididymal protein 13 protein-coding chr7-3507 chr7 5335841 5336051 + 6.83 0.000 intron (NM_001080495, intron 18 of 29) AluSz6|SINE|Alu 53003 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr5-5258 chr5 120698977 120699187 + 6.83 0.000 Intergenic HERVH-int|LTR|ERV1 167618 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr18-2419 chr18 13381971 13382181 + 6.83 0.000 intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 45458 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr8-3662 chr8 13737291 13737501 + 6.83 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 107706 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr11-4446 chr11 96112851 96113061 + 6.83 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -188749 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr6-7048 chr6 26273634 26273844 + 6.83 0.000 TTS (NM_003525) TTS (NM_003525) 763 NM_003525 8346 Hs.553506 NM_003525 ENSG00000278588 HIST1H2BI H2B/k|H2BFK histone cluster 1 H2B family member i protein-coding chr7-8270 chr7 38145740 38145950 + 6.83 0.000 Intergenic L1M5|LINE|L1 -32400 NM_001363347 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr6-7928 chr6 110192383 110192593 + 6.83 0.000 intron (NM_015891, intron 1 of 14) L2a|LINE|L2 12061 NM_015891 51362 Hs.428147 NM_015891 ENSG00000168438 CDC40 EHB3|PRP17|PRPF17 cell division cycle 40 protein-coding chr1-15100 chr1 99646733 99646943 + 6.83 0.000 intron (NM_017734, intron 1 of 7) intron (NM_017734, intron 1 of 7) 725 NM_017734 54873 Hs.483993 NM_017734 ENSG00000099260 PALMD C1orf11|PALML palmdelphin protein-coding chr10-4145 chr10 80657974 80658184 + 6.83 0.000 Intergenic Intergenic 8282 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr9-3322 chr9 92590438 92590648 + 6.83 0.000 intron (NM_001286969, intron 4 of 6) intron (NM_001286969, intron 4 of 6) -9714 NM_001286971 401541 Hs.713775 NM_001012267 ENSG00000188312 CENPP CENP-P centromere protein P protein-coding chr2-6529 chr2 202794303 202794513 + 6.83 0.000 intron (NM_001288623, intron 10 of 12) L1M4|LINE|L1 34826 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr13-4043 chr13 74132027 74132237 + 6.83 0.000 intron (NM_007249, intron 1 of 7) intron (NM_007249, intron 1 of 7) 1797 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr1-12518 chr1 23098680 23098890 + 6.83 0.000 intron (NM_001142546, intron 2 of 3) intron (NM_001142546, intron 2 of 3) 54480 NR_036057 100422866 NR_036057 ENSG00000263793 MIR3115 mir-3115 microRNA 3115 ncRNA chr2-8595 chr2 139509031 139509241 + 6.83 0.000 Intergenic L1ME3|LINE|L1 611812 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr10-8563 chr10 95133174 95133384 + 6.83 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -60921 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr11-6937 chr11 111127703 111127913 + 6.83 0.000 Intergenic Intergenic -30490 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr16-5264 chr16 53212566 53212776 + 6.83 0.000 intron (NM_001352157, intron 2 of 37) intron (NM_001352157, intron 2 of 37) 4220 NM_001352158 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr2-11861 chr2 22027844 22028054 + 6.83 0.000 Intergenic Intergenic -317297 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr2-13543 chr2 152558172 152558382 + 6.83 0.000 intron (NM_052905, intron 4 of 25) intron (NM_052905, intron 4 of 25) 159184 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr19-6419 chr19 15100265 15100475 + 6.83 0.000 Intergenic AluSq|SINE|Alu -7031 NM_001300910 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding chr9-5818 chr9 129350331 129350541 + 6.83 0.000 Intergenic Intergenic 13513 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr3-4626 chr3 14907693 14907903 + 6.83 0.000 intron (NM_152536, intron 10 of 19) intron (NM_152536, intron 10 of 19) 39707 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr4-7974 chr4 113252678 113252888 + 6.83 0.000 intron (NM_001354275, intron 11 of 43) L2a|LINE|L2 -40056 NM_001354281 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr18-2164 chr18 58249771 58249981 + 6.83 0.000 intron (NM_001144965, intron 4 of 30) intron (NM_001144965, intron 4 of 30) 28305 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr14-4813 chr14 67903072 67903282 + 6.83 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 79585 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr6-8364 chr6 149028947 149029157 + 6.83 0.000 intron (NR_134599, intron 1 of 1) intron (NR_134599, intron 1 of 1) 3609 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chrX-4251 chrX 39623713 39623923 + 6.83 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -37398 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr9-7219 chr9 782501 782711 + 6.83 0.000 Intergenic L1MA6|LINE|L1 -59091 NM_021951 1761 Hs.98586 NM_021951 ENSG00000137090 DMRT1 CT154|DMT1 doublesex and mab-3 related transcription factor 1 protein-coding chrX-4146 chrX 30077672 30077882 + 6.83 0.000 Intergenic Intergenic -137786 NM_002364 4113 Hs.113824 NM_002364 ENSG00000099399 MAGEB2 CT3.2|DAM6|MAGE-XP-2 MAGE family member B2 protein-coding chr9-8286 chr9 113161431 113161641 + 6.83 0.000 exon (NM_001860, exon 3 of 4) exon (NM_001860, exon 3 of 4) 10529 NM_001860 1318 Hs.24030 NM_001860 ENSG00000136867 SLC31A2 COPT2|CTR2|hCTR2 solute carrier family 31 member 2 protein-coding chr7-6844 chr7 45191291 45191501 + 6.83 0.000 Intergenic Intergenic 33605 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chrX-2724 chrX 123975262 123975472 + 6.83 0.000 intron (NM_006603, intron 1 of 32) intron (NM_006603, intron 1 of 32) 13661 NM_001042751 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 NEDXCF|SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chr16-4178 chr16 10684774 10684984 + 6.83 0.000 intron (NM_144674, intron 3 of 6) intron (NM_144674, intron 3 of 6) 10051 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr7-1981 chr7 157337290 157337500 + 6.83 0.000 intron (NM_005494, intron 1 of 7) CpG 391 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr18-1281 chr18 60086845 60087055 + 6.83 0.000 Intergenic Intergenic 186954 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr3-11126 chr3 186962668 186962878 + 6.83 0.000 intron (NM_173216, intron 1 of 7) L1M5|LINE|L1 32247 NM_173217 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr19-6198 chr19 5533818 5534028 + 6.83 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 34111 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr4-7461 chr4 70237527 70237737 + 6.83 0.000 Intergenic Intergenic -4984 NM_005212 1448 Hs.54415 NM_005212 ENSG00000171209 CSN3 CNS10|CSN10|CSNK|KCA casein kappa protein-coding chr14-3195 chr14 72737471 72737681 + 6.83 0.000 intron (NM_001280544, intron 3 of 9) intron (NM_001280544, intron 3 of 9) 155073 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chrX-4356 chrX 48807145 48807355 + 6.83 0.000 TTS (NR_135593) TTS (NR_135593) 4587 NR_135591 10013 Hs.6764 NM_006044 ENSG00000094631 HDAC6 CPBHM|HD6|JM21|PPP1R90 histone deacetylase 6 protein-coding chr6-4677 chr6 53257574 53257784 + 6.83 0.000 Intergenic Intergenic -19314 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr13-4001 chr13 69666949 69667159 + 6.83 0.000 Intergenic L1PA6|LINE|L1 -440159 NR_002717 6315 Hs.676453 NR_002717 ATXN8OS KLHL1AS|NCRNA00003|SCA8 ATXN8 opposite strand lncRNA ncRNA chr6-1328 chr6 18592955 18593165 + 6.83 0.000 intron (NR_149116, intron 4 of 7) intron (NR_149116, intron 4 of 7) 21276 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr3-10002 chr3 100141733 100141943 + 6.83 0.000 intron (NM_001167924, intron 1 of 9) intron (NM_001167924, intron 1 of 9) 26908 NM_001167924 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr19-6862 chr19 44207397 44207607 + 6.83 0.000 Intergenic Intergenic -5026 NM_001289166 7770 Hs.298089 NM_182490 ENSG00000131115 ZNF227 - zinc finger protein 227 protein-coding chrX-4704 chrX 87082775 87082985 + 6.83 0.000 Intergenic L1PA13|LINE|L1 -434922 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr7-7901 chr7 6549277 6549487 + 6.83 0.000 intron (NM_001145118, intron 1 of 21) intron (NM_001145118, intron 1 of 21) 2054 NM_001145118 392862 Hs.512174 NM_001145118 ENSG00000215045 GRID2IP DELPHILIN Grid2 interacting protein protein-coding chr2-13238 chr2 125039341 125039551 + 6.83 0.000 Intergenic L1PBa|LINE|L1 1014159 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr9-8894 chr9 136586644 136586854 + 6.83 0.000 Intergenic Intergenic 30432 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr12-6846 chr12 15152342 15152552 + 6.83 0.000 intron (NR_046559, intron 1 of 2) intron (NR_046559, intron 1 of 2) 524 NR_046559 100873980 Hs.569154 NR_046559 ENSG00000255660 RERG-AS1 - RERG antisense RNA 1 ncRNA chr16-4920 chr16 89552140 89552350 + 6.83 0.000 intron (NM_001363850, intron 13 of 17) AluJo|SINE|Alu -8412 NM_000977 6137 Hs.410817 NM_000977 ENSG00000167526 RPL13 BBC1|D16S444E|D16S44E|L13 ribosomal protein L13 protein-coding chr13-2884 chr13 112087380 112087590 + 6.83 0.000 intron (NR_120392, intron 1 of 3) intron (NR_120392, intron 1 of 3) -19634 NR_120394 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr2-4955 chr2 180884153 180884363 + 6.83 0.000 intron (NR_104324, intron 4 of 4) L1MA4A|LINE|L1 -96127 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chrX-762 chrX 23780292 23780502 + 6.83 0.000 Intergenic AluSx1|SINE|Alu -2761 NR_027783 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr17-6499 chr17 28898165 28898375 + 6.83 0.000 promoter-TSS (NM_001330170) promoter-TSS (NM_001330170) -537 NM_001330170 2319 Hs.514038 NM_004475 ENSG00000132589 FLOT2 ECS-1|ECS1|ESA|ESA1|M17S1 flotillin 2 protein-coding chr18-1553 chr18 25151667 25151877 + 6.83 0.000 intron (NM_001308225, intron 4 of 6) intron (NM_001308225, intron 4 of 6) -163793 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr4-5886 chr4 129191446 129191656 + 6.83 0.000 Intergenic Intergenic 95399 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr1-8327 chr1 53094515 53094725 + 6.83 0.000 intron (NR_109858, intron 5 of 10) intron (NR_109858, intron 5 of 10) 32407 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr2-8677 chr2 149757805 149758015 + 6.83 0.000 intron (NR_110240, intron 2 of 2) L1MA4|LINE|L1 101281 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr3-10916 chr3 172585618 172585828 + 6.83 0.000 intron (NR_146714, intron 2 of 3) AluSz6|SINE|Alu 9884 NR_146714 105374219 Hs.186269 NR_146714 ENSG00000223387 LINC02068 - long intergenic non-protein coding RNA 2068 ncRNA chr20-3063 chr20 6784156 6784366 + 6.83 0.000 Intergenic Intergenic 16575 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr4-6882 chr4 12601195 12601405 + 6.83 0.000 Intergenic L1PA10|LINE|L1 377849 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr17-2125 chr17 18235744 18235954 + 6.83 0.000 intron (NM_004140, intron 11 of 22) intron (NM_004140, intron 11 of 22) 10214 NM_004140 3996 Hs.513983 NM_004140 ENSG00000131899 LLGL1 DLG4|HUGL|HUGL-1|HUGL1|LLGL|Lgl1|Mgl1 LLGL scribble cell polarity complex component 1 protein-coding chr6-6740 chr6 2563619 2563829 + 6.83 0.000 Intergenic Intergenic -70776 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr9-6167 chr9 77546151 77546361 + 6.83 0.000 intron (NM_004297, intron 1 of 6) intron (NM_004297, intron 1 of 6) 98607 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr11-8065 chr11 29453287 29453497 + 6.83 0.000 Intergenic MSTA|LTR|ERVL-MaLR -141021 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr11-6433 chr11 66249454 66249664 + 6.83 0.000 Intergenic MIRb|SINE|MIR -7735 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr4-7814 chr4 99134170 99134380 + 6.83 0.000 intron (NR_037884, intron 2 of 9) L1MA7|LINE|L1 10023 NM_001306172 127 Hs.1219 NM_000670 ENSG00000198099 ADH4 ADH-2|HEL-S-4 alcohol dehydrogenase 4 (class II), pi polypeptide protein-coding chr10-5650 chr10 97215808 97216018 + 6.83 0.000 intron (NR_037909, intron 11 of 14) intron (NR_037909, intron 11 of 14) -29954 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr9-5864 chr9 130929160 130929370 + 6.83 0.000 intron (NM_001145106, intron 3 of 7) intron (NM_001145106, intron 3 of 7) 9803 NM_001145106 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr11-9343 chr11 46750992 46751202 + 6.83 0.000 intron (NM_001008938, intron 40 of 43) intron (NM_001008938, intron 40 of 43) 2095 NR_049846 100847020 NR_049846 ENSG00000263540 MIR5582 - microRNA 5582 ncRNA chr4-7128 chr4 36529544 36529754 + 6.83 0.000 intron (NR_149124, intron 3 of 4) L1M2|LINE|L1 -103221 NR_031701 100313806 NR_031701 ENSG00000283207 MIR1255B1 MIR1255B-1|MIRN1255B1 microRNA 1255b-1 ncRNA chr3-8128 chr3 24462786 24462996 + 6.83 0.000 intron (NM_001354709, intron 1 of 10) intron (NM_001354709, intron 1 of 10) -31196 NR_046244 644990 Hs.631912 NR_046244 THRB-AS1 - THRB antisense RNA 1 ncRNA chr17-6679 chr17 76989693 76989903 + 6.83 0.000 Intergenic Intergenic -20599 NR_136417 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr4-1858 chr4 159103908 159104118 + 6.83 0.000 promoter-TSS (NM_001351724) promoter-TSS (NM_001351724) -38 NM_001351724 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr15-2109 chr15 68257077 68257287 + 6.83 0.000 Intergenic CpG -20563 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr11-5928 chr11 15048213 15048423 + 6.83 0.000 Intergenic HERVL-int|LTR|ERVL -25275 NM_000728 797 Hs.534305 NM_000728 ENSG00000175868 CALCB CALC2|CGRP-II|CGRP2 calcitonin related polypeptide beta protein-coding chr16-5932 chr16 3580500 3580710 + 6.83 0.000 TTS (NM_032444) TTS (NM_032444) -3202 NM_178844 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chr11-8986 chr11 22441827 22442037 + 6.83 0.000 Intergenic MER67D|LTR|ERV1 50087 NR_120583 102723378 Hs.374255 NR_120583 ENSG00000255323 LINC01495 - long intergenic non-protein coding RNA 1495 ncRNA chr8-2589 chr8 48824071 48824281 + 6.83 0.000 Intergenic Intergenic -88865 NR_157026 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr9-7851 chr9 84620035 84620245 + 6.83 0.000 Intergenic Intergenic -48318 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr4-6445 chr4 137949827 137950037 + 6.83 0.000 Intergenic L1PA14|LINE|L1 -139082 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr12-3317 chr12 82754910 82755120 + 6.83 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 67860 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr8-7531 chr8 144161876 144162086 + 6.83 0.000 intron (NM_001099280, intron 2 of 12) intron (NM_001099280, intron 2 of 12) 13336 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr11-10562 chr11 121671977 121672187 + 6.83 0.000 Intergenic Intergenic 219768 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr10-6453 chr10 29798815 29799025 + 6.83 0.000 Intergenic Intergenic -61984 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr2-8238 chr2 97742498 97742708 + 6.83 0.000 Intergenic Intergenic 8197 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr2-13425 chr2 142420669 142420879 + 6.83 0.000 Intergenic Intergenic -289073 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr7-8677 chr7 72938409 72938619 + 6.83 0.000 intron (NM_001257190, intron 8 of 15) intron (NM_001257190, intron 8 of 15) 16249 NR_033323 260294 Hs.510927 NM_148936 ENSG00000106133 NSUN5P2 NOL1R2|NSUN5C|WBSCR20B|WBSCR20C NSUN5 pseudogene 2 pseudo chr6-8554 chr6 162257914 162258124 + 6.83 0.000 intron (NM_004562, intron 3 of 11) L2b|LINE|L2 -469113 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr22-4043 chr22 41584359 41584569 + 6.83 0.000 intron (NM_002676, intron 3 of 7) intron (NM_002676, intron 3 of 7) 5376 NM_002676 5372 Hs.75835 NM_002676 ENSG00000100417 PMM1 PMM 1|PMMH-22|Sec53 phosphomannomutase 1 protein-coding chr1-13489 chr1 3816028 3816238 + 6.83 0.000 intron (NM_014704, intron 21 of 21) intron (NM_014704, intron 21 of 21) -19635 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 - leucine rich repeat containing 47 protein-coding chr19-2992 chr19 41244812 41245022 + 6.83 0.000 intron (NM_001278599, intron 9 of 16) MIR|SINE|MIR -17640 NM_144732 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding chr12-6109 chr12 124927737 124927947 + 6.83 0.000 Intergenic tRNA-Phe-TTY|tRNA|tRNA 12295 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr11-9217 chr11 38778755 38778965 + 6.83 0.000 Intergenic MER67D|LTR|ERV1 130002 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chrX-5204 chrX 134604631 134604841 + 6.83 0.000 intron (NM_001316887, intron 2 of 3) intron (NM_001316887, intron 2 of 3) 53735 NM_021796 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr5-3387 chr5 141816033 141816243 + 6.83 0.000 Intergenic Intergenic 50064 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr11-10018 chr11 81007740 81007950 + 6.83 0.000 Intergenic Intergenic -245042 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr12-7962 chr12 109808222 109808432 + 6.83 0.000 exon (NM_147204, exon 2 of 14) exon (NM_147204, exon 2 of 14) 6469 NM_001177431 59341 Hs.506713 NM_021625 ENSG00000111199 TRPV4 BCYM3|CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel subfamily V member 4 protein-coding chr17-7444 chr17 12665107 12665317 + 6.83 0.000 promoter-TSS (NM_153604) promoter-TSS (NM_153604) -678 NM_001146312 93649 Hs.462257 NM_153604 ENSG00000141052 MYOCD MYCD myocardin protein-coding chr4-7613 chr4 82352982 82353192 + 6.83 0.000 TTS (NM_002138) TTS (NM_002138) 20904 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr1-14998 chr1 91591842 91592052 + 6.83 0.000 Intergenic Intergenic 90839 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr1-11923 chr1 57282489 57282699 + 6.83 0.000 intron (NM_001353980, intron 5 of 5) intron (NM_001353980, intron 5 of 5) 140518 NM_001365793 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr3-4301 chr3 160474137 160474347 + 6.83 0.000 intron (NR_148403, intron 1 of 20) L2a|LINE|L2 11505 NR_148403 100174949 NR_148401 ENSG00000248710 TRIM59-IFT80 IFT80-L TRIM59-IFT80 protein ncRNA chr20-3305 chr20 12107405 12107615 + 6.83 0.000 Intergenic L1MB1|LINE|L1 189617 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chrX-4568 chrX 70261869 70262079 + 6.83 0.000 Intergenic L2-1_AMi|LINE|L2 -2170 NM_002565 5030 Hs.673854 NM_002565 ENSG00000186912 P2RY4 NRU|P2P|P2Y4|UNR pyrimidinergic receptor P2Y4 protein-coding chr10-7488 chr10 11451955 11452165 + 6.83 0.000 Intergenic Intergenic 80220 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr16-3730 chr16 7453062 7453272 + 6.83 0.000 intron (NM_145893, intron 1 of 13) intron (NM_145893, intron 1 of 13) 120322 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr13-4123 chr13 81667841 81668051 + 6.83 0.000 Intergenic Intergenic -440963 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr4-6261 chr4 74838784 74838994 + 6.83 0.000 Intergenic MIRb|SINE|MIR -44366 NM_001316963 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr7-3655 chr7 44326134 44326344 + 6.83 0.000 promoter-TSS (NM_001293170) promoter-TSS (NM_001293170) -608 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr12-6556 chr12 118606216 118606426 + 6.83 0.000 Intergenic (ACACAT)n|Simple_repeat|Simple_repeat 155358 NR_134998 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA chr3-5816 chr3 29644357 29644567 + 6.83 0.000 intron (NM_001003792, intron 4 of 13) intron (NM_001003792, intron 4 of 13) 289694 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr22-1504 chr22 39087879 39088089 + 6.83 0.000 TTS (NM_021822) TTS (NM_021822) -9240 NM_001166004 164668 Hs.440515 NM_181773 ENSG00000100298 APOBEC3H A3H|ARP-10|ARP10 apolipoprotein B mRNA editing enzyme catalytic subunit 3H protein-coding chrX-3449 chrX 23889322 23889532 + 6.83 0.000 intron (NM_024122, intron 1 of 8) L4_A_Mam|LINE|RTE-X 18511 NR_026545 79135 Hs.495851 NM_024122 ENSG00000184831 APOO FAM121B|MIC26|MICOS26|Mic23|My025 apolipoprotein O protein-coding chr13-3974 chr13 63872080 63872290 + 6.83 0.000 Intergenic AluSz6|SINE|Alu -28060 NR_130763 102723968 Hs.551671 NR_130763 ENSG00000219926 LOC102723968 - uncharacterized LOC102723968 ncRNA chr1-16269 chr1 212521402 212521612 + 6.83 0.000 Intergenic Intergenic -24187 NR_125985 101929565 NR_125985 ENSG00000228067 LINC01740 - long intergenic non-protein coding RNA 1740 ncRNA chr17-7810 chr17 40309102 40309312 + 6.83 0.000 promoter-TSS (NM_000964) promoter-TSS (NM_000964) 27 NM_000964 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding chr3-5743 chr3 20104506 20104716 + 6.83 0.000 intron (NM_003884, intron 5 of 17) intron (NM_003884, intron 5 of 17) -32954 NR_036086 100422901 NR_036086 ENSG00000266745 MIR3135A MIR3135|hsa-mir-3135a microRNA 3135a ncRNA chr1-16680 chr1 244673661 244673871 + 6.83 0.000 intron (NM_016076, intron 1 of 4) intron (NM_016076, intron 1 of 4) 20640 NM_001297746 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr7-6567 chr7 66731344 66731554 + 6.83 0.000 intron (NM_001367727, intron 4 of 11) AluJr|SINE|Alu -9284 NM_001367753 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr11-10021 chr11 81763774 81763984 + 6.83 0.000 Intergenic MER58B|DNA|hAT-Charlie 126957 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr10-7129 chr10 100314637 100314847 + 6.83 0.000 intron (NM_016112, intron 2 of 15) intron (NM_016112, intron 2 of 15) 15486 NM_001253837 9033 Hs.159241 NM_016112 ENSG00000107593 PKD2L1 PCL|PKD2L|PKDL|TRPP3 polycystin 2 like 1, transient receptor potential cation channel protein-coding chr16-6591 chr16 66970874 66971084 + 6.83 0.000 intron (NM_001185177, intron 9 of 12) MIRb|SINE|MIR 3504 NM_001185176 23491 Hs.268700 NM_012122 ENSG00000172828 CES3 ES31 carboxylesterase 3 protein-coding chr15-3287 chr15 77680673 77680883 + 6.83 0.000 intron (NM_001301194, intron 2 of 3) intron (NM_001301194, intron 2 of 3) 15370 NM_001301200 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr11-8526 chr11 126373391 126373601 + 6.83 0.000 intron (NM_001348396, intron 2 of 11) intron (NM_001348396, intron 2 of 11) 17484 NM_001348399 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr20-2457 chr20 31501845 31502055 + 6.83 0.000 Intergenic AluJo|SINE|Alu -12460 NM_178580 81502 Hs.373741 NM_030789 ENSG00000101294 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 histocompatibility minor 13 protein-coding chr8-6336 chr8 51049235 51049445 + 6.83 0.000 Intergenic Intergenic 760105 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr12-4685 chr12 48551612 48551822 + 6.83 0.000 Intergenic SVA_C|Retroposon|SVA 18329 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr17-6502 chr17 29095964 29096174 + 6.83 0.000 intron (NM_001346767, intron 28 of 39) intron (NM_001346767, intron 28 of 39) -20460 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr7-8292 chr7 39517196 39517406 + 6.83 0.000 Intergenic Intergenic -49103 NM_001282446 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr10-7716 chr10 30783347 30783557 + 6.83 0.000 Intergenic Intergenic 60233 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr1-15159 chr1 106914948 106915158 + 6.83 0.000 Intergenic L1PA13|LINE|L1 96814 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr1-16723 chr1 248239107 248239317 + 6.83 0.000 exon (NM_017504, exon 1 of 1) exon (NM_017504, exon 1 of 1) 283 NM_017504 26245 Hs.381309 NM_017504 ENSG00000171180 OR2M4 HSHTPCRX18|HTPCRX18|OR1-55|OST710|TPCR100 olfactory receptor family 2 subfamily M member 4 protein-coding chr6-6841 chr6 7869472 7869682 + 6.83 0.000 intron (NM_001718, intron 4 of 6) intron (NM_001718, intron 4 of 6) 40500 NM_001145549 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr9-4454 chr9 22478726 22478936 + 6.83 0.000 Intergenic AluJb|SINE|Alu 32007 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr2-8917 chr2 182814874 182815084 + 6.83 0.000 Intergenic Intergenic 51658 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr5-6153 chr5 41788459 41788669 + 6.83 0.000 intron (NR_157114, intron 12 of 15) L1MEc|LINE|L1 55093 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr7-7186 chr7 8403232 8403442 + 6.83 0.000 Intergenic L2a|LINE|L2 -30272 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr4-8459 chr4 156038174 156038384 + 6.83 0.000 Intergenic L1PBa1|LINE|L1 -84413 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chrX-4123 chrX 26329450 26329660 + 6.83 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 113386 NM_001271752 347541 Hs.224079 NM_001271752 ENSG00000188408 MAGEB5 CT3.3|MAGE-B5 MAGE family member B5 protein-coding chr3-10412 chr3 130529442 130529652 + 6.83 0.000 Intergenic L2c|LINE|L2 -30787 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr13-3394 chr13 91316276 91316486 + 6.83 0.000 Intergenic Intergenic -31439 NR_027349 407975 Hs.24115 NR_027349 ENSG00000215417 MIR17HG C13orf25|FGLDS2|LINC00048|MIHG1|MIRH1|MIRHG1|NCRNA00048|miR-17-92 miR-17-92a-1 cluster host gene ncRNA chr2-13415 chr2 141753532 141753742 + 6.83 0.000 intron (NM_018557, intron 2 of 90) L2b|LINE|L2 378064 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr4-6500 chr4 155989588 155989798 + 6.83 0.000 Intergenic MER5A|DNA|hAT-Charlie -35827 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr17-4913 chr17 75105729 75105939 + 6.83 0.000 intron (NM_004695, intron 6 of 6) intron (NM_004695, intron 6 of 6) -4135 NM_001304273 79637 Hs.413047 NM_024585 ENSG00000125449 ARMC7 - armadillo repeat containing 7 protein-coding chr2-12113 chr2 35147226 35147436 + 6.83 0.000 Intergenic Intergenic -324074 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr22-2546 chr22 26038613 26038823 + 6.83 0.000 Intergenic Intergenic -130744 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr22-1025 chr22 30822284 30822494 + 6.83 0.000 promoter-TSS (NM_001282741) promoter-TSS (NM_001282741) -127 NM_001282741 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr12-2586 chr12 117032979 117033189 + 6.83 0.000 Intergenic Intergenic -45747 NR_103809 100506551 Hs.657861 NR_103809 ENSG00000257279 LOC100506551 - uncharacterized LOC100506551 ncRNA chr2-11721 chr2 10437983 10438193 + 6.83 0.000 Intergenic AluSz|SINE|Alu 8761 NR_028374 100302743 Hs.730525 NR_028374 ENSG00000206633 SNORA80B ACA67B small nucleolar RNA, H/ACA box 80B snoRNA chr2-10487 chr2 221571656 221571866 + 6.83 0.000 intron (NM_001363748, intron 1 of 17) CpG 543 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-9411 chr3 48416347 48416557 + 6.83 0.000 intron (NM_002673, intron 16 of 37) intron (NM_002673, intron 16 of 37) 13011 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chr2-7587 chr2 25408472 25408682 + 6.83 0.000 intron (NM_001351385, intron 14 of 17) intron (NM_001351385, intron 14 of 17) -65987 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr22-2369 chr22 45222918 45223128 + 6.83 0.000 intron (NM_001009880, intron 1 of 9) L1ME4b|LINE|L1 -10557 NM_015264 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr21-1467 chr21 34623269 34623479 + 6.83 0.000 Intergenic L2a|LINE|L2 -8261 NM_004414 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr15-4819 chr15 73297742 73297952 + 6.83 0.000 intron (NM_002499, intron 26 of 28) intron (NM_002499, intron 26 of 28) -2063 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr2-12809 chr2 89760403 89760613 + 6.83 0.000 Intergenic AluSx|SINE|Alu -122601 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr9-5657 chr9 122519625 122519835 + 6.83 0.000 exon (NM_001004452, exon 1 of 1) exon (NM_001004452, exon 1 of 1) 589 NM_001004452 26219 Hs.632679 NM_001004452 ENSG00000239590 OR1J4 HSHTPCRX01|HTPCRX01|OR9-21 olfactory receptor family 1 subfamily J member 4 protein-coding chr6-7851 chr6 105247089 105247299 + 6.83 0.000 Intergenic L1PA3|LINE|L1 -67180 NM_022361 64208 Hs.458336 NM_022361 ENSG00000132429 POPDC3 POP3|bA355M14.1 popeye domain containing 3 protein-coding chr15-5220 chr15 96449536 96449746 + 6.83 0.000 Intergenic Intergenic 115876 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chrX-5315 chrX 144551439 144551649 + 6.83 0.000 Intergenic L1MA2|LINE|L1 667473 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr9-6176 chr9 83628574 83628784 + 6.83 0.000 intron (NM_001001551, intron 2 of 4) intron (NM_001001551, intron 2 of 4) 5536 NR_046421 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding chr1-12840 chr1 93764038 93764248 + 6.83 0.000 intron (NR_148965, intron 1 of 1) intron (NR_148965, intron 1 of 1) 11240 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr6-2713 chr6 46215791 46216001 + 6.83 0.000 Intergenic MIR|SINE|MIR -44886 NM_001290073 59084 Hs.35198 NM_021572 ENSG00000112796 ENPP5 NPP-5|NPP5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 protein-coding chr17-8001 chr17 49522461 49522671 + 6.83 0.000 intron (NR_103773, intron 1 of 2) intron (NR_103773, intron 1 of 2) 11749 NR_106751 102465141 NR_106751 ENSG00000277478 MIR6165 hsa-mir-6165 microRNA 6165 ncRNA chrX-4037 chrX 17841389 17841599 + 6.83 0.000 intron (NM_001172743, intron 1 of 2) intron (NM_001172743, intron 1 of 2) 19333 NR_033348 10742 Hs.446680 NM_021785 ENSG00000131831 RAI2 - retinoic acid induced 2 protein-coding chr2-6178 chr2 1299714 1299924 + 6.83 0.000 intron (NM_018968, intron 14 of 16) MIRb|SINE|MIR -113642 NM_000547 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chr11-8727 chr11 7422529 7422739 + 6.83 0.000 intron (NM_175733, intron 6 of 6) intron (NM_175733, intron 6 of 6) 43201 NR_103855 100506258 Hs.661614 NR_103855 ENSG00000251364 LOC100506258 - uncharacterized LOC100506258 ncRNA chr5-7907 chr5 76541742 76541952 + 6.83 0.000 intron (NM_006633, intron 2 of 35) intron (NM_006633, intron 2 of 35) -5562 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr4-8421 chr4 153039043 153039253 + 6.83 0.000 Intergenic Intergenic 96165 NM_033393 85462 Hs.132629 NM_033393 ENSG00000137460 FHDC1 - FH2 domain containing 1 protein-coding chr16-3075 chr16 63385272 63385482 + 6.83 0.000 Intergenic Intergenic -1348939 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr11-9216 chr11 38738289 38738499 + 6.83 0.000 Intergenic Intergenic 89536 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr15-4164 chr15 92052526 92052736 + 6.83 0.000 intron (NR_135775, intron 2 of 10) L3|LINE|CR1 198327 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr2-5766 chr2 222245927 222246137 + 6.83 0.000 intron (NM_181457, intron 4 of 7) intron (NM_181457, intron 4 of 7) -52115 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr22-1538 chr22 29336640 29336850 + 6.83 0.000 intron (NM_001127, intron 16 of 22) AluSq2|SINE|Alu -3487 NR_003686 100113380 NR_003686 ENSG00000239127 SNORD125 - small nucleolar RNA, C/D box 125 snoRNA chr10-5607 chr10 93768214 93768424 + 6.83 0.000 intron (NR_131777, intron 2 of 5) MIRb|SINE|MIR 10383 NM_005097 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr2-11358 chr2 207220021 207220231 + 6.83 0.000 intron (NR_110283, intron 3 of 3) intron (NR_110283, intron 3 of 3) -19685 NR_146555 105373853 Hs.678559 NR_146555 ENSG00000229647 MYOSLID - myocardin-induced smooth muscle lncRNA, inducer of differentiation ncRNA chr13-2653 chr13 80276638 80276848 + 6.83 0.000 Intergenic Intergenic 62916 NM_001318538 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr4-8097 chr4 124970123 124970333 + 6.83 0.000 Intergenic L1PA16|LINE|L1 -257496 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr9-5094 chr9 34865921 34866131 + 6.83 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -27440 NR_024481 389715 Hs.713965 NM_001126494 FAM205BP C9orf144|C9orf144A|FAM205B transmembrane protein C9orf144B pseudogene pseudo chr2-12619 chr2 72070383 72070593 + 6.83 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 77374 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr2-4827 chr2 64330664 64330874 + 6.83 0.000 Intergenic Intergenic -9990 NR_039632 100616265 NR_039632 ENSG00000283222 MIR4433A MIR4433|hsa-mir-4433a microRNA 4433a ncRNA chr5-3777 chr5 66767930 66768140 + 6.83 0.000 intron (NM_001290228, intron 2 of 4) L2|LINE|L2 -60738 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr1-11618 chr1 233379068 233379278 + 6.83 0.000 exon (NM_032435, exon 9 of 10) exon (NM_032435, exon 9 of 10) 51449 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr16-6689 chr16 70198795 70199005 + 6.83 0.000 Intergenic MER51C|LTR|ERV1 10578 NR_135173 105371328 NR_135173 LOC105371328 - uncharacterized LOC105371328 ncRNA chr19-3845 chr19 16376760 16376970 + 6.83 0.000 intron (NM_001258375, intron 21 of 21) intron (NM_001258375, intron 21 of 21) 52039 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr11-7462 chr11 127582868 127583078 + 6.83 0.000 Intergenic Intergenic 311903 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr8-5067 chr8 33250985 33251195 + 6.83 0.000 Intergenic L1PA10|LINE|L1 222056 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr3-11260 chr3 197804167 197804377 + 6.83 0.000 intron (NM_001365717, intron 1 of 19) AluSz|SINE|Alu 13018 NM_001365715 84859 Hs.518414 NM_032773 ENSG00000186001 LRCH3 - leucine rich repeats and calponin homology domain containing 3 protein-coding chr7-8036 chr7 20050387 20050597 + 6.83 0.000 intron (NR_110114, intron 1 of 5) L2a|LINE|L2 89934 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr12-6956 chr12 27109864 27110074 + 6.83 0.000 Intergenic Intergenic -27447 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr6-6307 chr6 43226096 43226306 + 6.83 0.000 intron (NM_199184, intron 2 of 2) intron (NM_199184, intron 2 of 2) 3280 NM_006443 10591 Hs.109752 NM_006443 ENSG00000112667 DNPH1 C6orf108|RCL|dJ330M21.3 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 protein-coding chrX-4889 chrX 107070714 107070924 + 6.83 0.000 intron (NR_136730, intron 6 of 7) AluJo|SINE|Alu 47766 NR_136731 55285 Hs.139053 NM_018301 ENSG00000089682 RBM41 - RNA binding motif protein 41 protein-coding chr8-7442 chr8 140918720 140918930 + 6.83 0.000 intron (NM_001352700, intron 1 of 34) intron (NM_001352700, intron 1 of 34) 82179 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr7-2412 chr7 74328920 74329130 + 6.83 0.000 intron (NM_032421, intron 2 of 15) AluY|SINE|Alu 39550 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr4-5151 chr4 154502751 154502961 + 6.83 0.000 Intergenic Intergenic -11057 NM_001142552 54798 Hs.655664 NM_017639 ENSG00000197410 DCHS2 CDH27|CDHJ|CDHR7|PCDH23|PCDHJ dachsous cadherin-related 2 protein-coding chrX-2779 chrX 131237162 131237372 + 6.83 0.000 Intergenic Intergenic 51794 NM_001170963 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr12-7158 chr12 48546244 48546454 + 6.83 0.000 Intergenic L1MA1|LINE|L1 20717 NM_001005203 341568 Hs.524373 NM_001005203 ENSG00000284723 OR8S1 - olfactory receptor family 8 subfamily S member 1 protein-coding chr3-4128 chr3 115922659 115922869 + 6.83 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) -17638 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chrX-3928 chrX 9710184 9710394 + 6.83 0.000 intron (NM_001139466, intron 15 of 17) intron (NM_001139466, intron 15 of 17) 55558 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr18-1853 chr18 24391949 24392159 + 6.83 0.000 intron (NM_080597, intron 1 of 27) AluJb|SINE|Alu 5770 NM_080597 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr3-5453 chr3 179591314 179591524 + 6.83 0.000 intron (NM_020409, intron 6 of 6) intron (NM_020409, intron 6 of 6) 13219 NM_020409 57129 Hs.283734 NM_020409 ENSG00000136522 MRPL47 CGI-204|L47mt|MRP-L47|NCM1 mitochondrial ribosomal protein L47 protein-coding chr7-4624 chr7 26509333 26509543 + 6.83 0.000 intron (NR_148500, intron 5 of 5) AluY|SINE|Alu 29387 NR_022006 9808 Hs.69749 NM_014769 ENSG00000122548 KIAA0087 - KIAA0087 lncRNA ncRNA chr21-685 chr21 17492149 17492359 + 6.83 0.000 Intergenic Intergenic -20652 NM_001207066 1525 Hs.627078 NM_001338 ENSG00000154639 CXADR CAR|CAR4/6|HCAR CXADR Ig-like cell adhesion molecule protein-coding chr2-4437 chr2 176207214 176207424 + 6.83 0.000 Intergenic AluSz|SINE|Alu -18361 NR_033979 401022 Hs.98661 NR_033979 ENSG00000224189 HAGLR HOXD-AS1|MIR7704HG|Mdgt HOXD antisense growth-associated long non-coding RNA ncRNA chr1-9789 chr1 56977959 56978169 + 6.83 0.000 Intergenic Intergenic -11924 NM_001278544 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr17-7170 chr17 79486846 79487056 + 6.83 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 29197 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr10-4990 chr10 31398913 31399123 + 6.83 0.000 intron (NM_001323646, intron 4 of 11) AluSx|SINE|Alu 737 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr7-7678 chr7 152597085 152597295 + 6.83 0.000 Intergenic Intergenic 78951 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr12-7783 chr12 96649398 96649608 + 6.83 0.000 intron (NM_001306084, intron 34 of 67) intron (NM_001306084, intron 34 of 67) 159926 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr10-5341 chr10 71615165 71615375 + 6.83 0.000 intron (NM_052836, intron 9 of 12) MER113|DNA|hAT-Charlie -103350 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr11-5642 chr11 122384021 122384231 + 6.83 0.000 intron (NR_137179, intron 1 of 4) L1MA2|LINE|L1 -16138 NR_137192 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr12-5050 chr12 89118987 89119197 + 6.83 0.000 Intergenic MIR|SINE|MIR -99400 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr7-7297 chr7 40702849 40703059 + 6.83 0.000 intron (NM_024728, intron 13 of 14) intron (NM_024728, intron 13 of 14) 276985 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr8-2232 chr8 27891912 27892122 + 6.83 0.000 intron (NM_173833, intron 7 of 8) intron (NM_173833, intron 7 of 8) -5901 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr11-9070 chr11 29979233 29979443 + 6.83 0.000 TTS (NR_132652) TTS (NR_132652) 3055 NR_132652 106456574 Hs.128812 NR_132652 ENSG00000261340 LINC01616 n341006 long intergenic non-protein coding RNA 1616 ncRNA chr9-8436 chr9 121888020 121888230 + 6.83 0.000 intron (NM_001139442, intron 6 of 8) intron (NM_001139442, intron 6 of 8) 145340 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr14-4283 chr14 18658854 18659064 + 6.83 0.000 Intergenic MER5B|DNA|hAT-Charlie -25325 NR_046104 642426 Hs.578301 NR_046104 ENSG00000257504 LINC02297 - long intergenic non-protein coding RNA 2297 ncRNA chr22-3822 chr22 31122798 31123008 + 6.83 0.000 promoter-TSS (NM_001284289) promoter-TSS (NM_001284289) -20 NM_001284288 27124 Hs.517549 NM_014422 ENSG00000185133 INPP5J INPP5|PIB5PA|PIPP inositol polyphosphate-5-phosphatase J protein-coding chr9-6244 chr9 125956395 125956605 + 6.83 0.000 intron (NR_024122, intron 4 of 7) intron (NR_024122, intron 4 of 7) 208317 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr8-7118 chr8 119785918 119786128 + 6.83 0.000 intron (NM_003184, intron 14 of 25) L3b|LINE|CR1 46818 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr14-4393 chr14 29490688 29490898 + 6.83 0.000 Intergenic OldhAT1|DNA|hAT-Ac 436303 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr6-7979 chr6 114275716 114275926 + 6.83 0.000 intron (NR_125845, intron 9 of 9) MER58B|DNA|hAT-Charlie -212944 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr20-4057 chr20 37876972 37877182 + 6.83 0.000 Intergenic Intergenic -26050 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chrX-3272 chrX 97046829 97047039 + 6.83 0.000 intron (NM_007309, intron 17 of 26) L2|LINE|L2 163026 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr9-6847 chr9 71463728 71463938 + 6.83 0.000 Intergenic Intergenic -16862 NM_001366144 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr2-13041 chr2 109030868 109031078 + 6.83 0.000 Intergenic Intergenic -41753 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr1-10704 chr1 192215423 192215633 + 6.83 0.000 Intergenic L1MC2|LINE|L1 57066 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr6-8013 chr6 117272388 117272598 + 6.83 0.000 exon (NM_182645, exon 4 of 4) exon (NM_182645, exon 4 of 4) 6935 NM_182645 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr4-5284 chr4 175724972 175725182 + 6.83 0.000 intron (NM_201592, intron 1 of 6) intron (NM_201592, intron 1 of 6) 62599 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr6-3349 chr6 25768444 25768654 + 6.83 0.000 intron (NM_001286121, intron 3 of 12) L2|LINE|L2 13807 NM_005495 10050 Hs.282931 NM_005495 ENSG00000146039 SLC17A4 KAIA2138 solute carrier family 17 member 4 protein-coding chr5-3604 chr5 111735916 111736126 + 6.83 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) 20230 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr1-14008 chr1 26174490 26174700 + 6.83 0.000 Intergenic AluSq|SINE|Alu -2896 NM_001297648 10256 Hs.16232 NM_006314 ENSG00000142675 CNKSR1 CNK|CNK1 connector enhancer of kinase suppressor of Ras 1 protein-coding chr16-3052 chr16 56060169 56060379 + 6.83 0.000 Intergenic Intergenic -104243 NM_001190158 221223 Hs.350800 NM_145024 ENSG00000159398 CES5A CAUXIN|CES4C1|CES5|CES7|HEL126 carboxylesterase 5A protein-coding chr2-11596 chr2 2218547 2218757 + 6.83 0.000 intron (NM_015025, intron 2 of 24) L1ME1|LINE|L1 -100580 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr1-15301 chr1 117110744 117110954 + 6.83 0.000 TTS (NM_025188) TTS (NM_025188) 10900 NM_025188 80263 Hs.301526 NM_025188 ENSG00000134253 TRIM45 RNF99 tripartite motif containing 45 protein-coding chr17-7995 chr17 49283972 49284182 + 6.83 0.000 Intergenic AluSz|SINE|Alu 4377 NR_106745 102465137 NR_106745 ENSG00000273500 MIR6129 hsa-mir-6129 microRNA 6129 ncRNA chr15-1466 chr15 98954453 98954663 + 6.83 0.000 intron (NM_000875, intron 20 of 20) intron (NM_000875, intron 20 of 20) 51098 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr18-2815 chr18 5447224 5447434 + 6.83 0.000 intron (NM_001281535, intron 5 of 21) intron (NM_001281535, intron 5 of 21) 93227 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr5-6901 chr5 132680664 132680874 + 6.83 0.000 intron (NR_134248, intron 1 of 1) L2a|LINE|L2 1860 NR_134248 105379176 Hs.73917 NR_134248 LOC105379176 - uncharacterized LOC105379176 ncRNA chr3-6728 chr3 137419788 137419998 + 6.83 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -344422 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding chr15-3526 chr15 99923596 99923806 + 6.83 0.000 Intergenic L1MEg|LINE|L1 116678 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr8-7458 chr8 141610886 141611096 + 6.83 0.000 Intergenic Intergenic -103761 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr1-14648 chr1 58125903 58126113 + 6.83 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 124495 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr12-6720 chr12 5377453 5377663 + 6.83 0.000 Intergenic Intergenic -54550 NM_001102654 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr4-7721 chr4 89765986 89766196 + 6.83 0.000 intron (NM_001146054, intron 4 of 5) intron (NM_001146054, intron 4 of 5) -70310 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chrX-799 chrX 57909902 57910112 + 6.83 0.000 exon (NM_007156, exon 1 of 1) exon (NM_007156, exon 1 of 1) 626 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr16-6019 chr16 8911651 8911861 + 6.83 0.000 intron (NM_001286458, intron 11 of 31) L1ME3A|LINE|L1 24883 NM_001286458 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chrX-2817 chrX 135386840 135387050 + 6.83 0.000 Intergenic L1PA4|LINE|L1 -9484 NR_104652 100506790 Hs.161358 NR_104652 ENSG00000229015 LOC100506790 - uncharacterized LOC100506790 ncRNA chr2-6607 chr2 236941092 236941302 + 6.83 0.000 Intergenic Intergenic 114970 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr15-3675 chr15 39462720 39462930 + 6.83 0.000 Intergenic Intergenic -118254 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr15-3450 chr15 92155653 92155863 + 6.83 0.000 TTS (NR_135775) TTS (NR_135775) -238123 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr9-4032 chr9 88388470 88388680 + 6.83 0.000 intron (NM_006717, intron 1 of 5) CpG 131 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chrX-3661 chrX 101617371 101617581 + 6.83 0.000 intron (NM_001184768, intron 2 of 3) intron (NM_001184768, intron 2 of 3) 524 NM_019007 54470 Hs.83530 NM_019007 ENSG00000198960 ARMCX6 GASP10 armadillo repeat containing X-linked 6 protein-coding chr2-12149 chr2 38253075 38253285 + 6.83 0.000 Intergenic MER8|DNA|TcMar-Tigger 122075 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr9-5071 chr9 33770610 33770820 + 6.83 0.000 intron (NM_001197098, intron 1 of 4) MLT1B|LTR|ERVL-MaLR 19894 NM_001197098 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr21-1964 chr21 46249263 46249473 + 6.83 0.000 intron (NM_003906, intron 20 of 27) AluJb|SINE|Alu 20137 NR_110566 114044 Hs.655095 NR_002776 ENSG00000215424 MCM3AP-AS1 C21orf85|MCM3AP-AS|MCM3APAS|MCM3APASB|NCRNA00031 MCM3AP antisense RNA 1 ncRNA chr10-8871 chr10 112627396 112627606 + 6.83 0.000 intron (NM_001365712, intron 6 of 8) intron (NM_001365712, intron 6 of 8) -6669 NR_036177 100422909 NR_036177 ENSG00000264763 MIR4295 - microRNA 4295 ncRNA chr5-3443 chr5 157976633 157976843 + 6.83 0.000 Intergenic MER39|LTR|ERV1 -117593 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr3-8871 chr3 10480502 10480712 + 6.83 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) 24977 NM_001363862 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr17-5897 chr17 72977008 72977218 + 6.83 0.000 intron (NM_001352692, intron 4 of 9) MLT1E2|LTR|ERVL-MaLR 115575 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr3-6053 chr3 50503030 50503240 + 6.83 0.000 intron (NM_001291101, intron 1 of 37) CpG 499 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr12-6799 chr12 10676721 10676931 + 6.83 0.000 Intergenic Intergenic -2774 NM_018423 55359 Hs.24979 NM_018423 ENSG00000060140 STYK1 NOK|SuRTK106 serine/threonine/tyrosine kinase 1 protein-coding chr8-6921 chr8 102637513 102637723 + 6.83 0.000 Intergenic Intergenic 16346 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr15-4203 chr15 25616404 25616614 + 6.83 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -177453 NM_000462 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr16-6155 chr16 23224421 23224631 + 6.83 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 41781 NM_001039 6340 Hs.371727 NM_001039 ENSG00000166828 SCNN1G BESC3|ENaCg|ENaCgamma|LDLS2|PHA1|SCNEG sodium channel epithelial 1 gamma subunit protein-coding chr1-14278 chr1 37444770 37444980 + 6.83 0.000 Intergenic Intergenic 29568 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr12-5760 chr12 590036 590246 + 6.83 0.000 intron (NM_016533, intron 1 of 3) AluJo|SINE|Alu -3655 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr20-3880 chr20 30821340 30821550 + 6.83 0.000 Intergenic Intergenic -417983 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 MLLT10 pseudogene 1 pseudo chr21-1921 chr21 45266661 45266871 + 6.83 0.000 3' UTR (NM_015227, exon 8 of 8) 3' UTR (NM_015227, exon 8 of 8) 21129 NM_133635 23275 Hs.592164 NM_015227 ENSG00000186866 POFUT2 C21orf80|FUT13 protein O-fucosyltransferase 2 protein-coding chr17-8173 chr17 61480319 61480529 + 6.83 0.000 intron (NM_018488, intron 7 of 7) intron (NM_018488, intron 7 of 7) 23936 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr8-4871 chr8 57997027 57997237 + 6.83 0.000 intron (NM_147189, intron 1 of 4) intron (NM_147189, intron 1 of 4) 2609 NM_147189 90362 Hs.154652 NM_147189 ENSG00000169122 FAM110B C8orf72 family with sequence similarity 110 member B protein-coding chr20-2056 chr20 8981231 8981441 + 6.83 0.000 Intergenic Intergenic -87718 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr9-7870 chr9 86767410 86767620 + 6.83 0.000 Intergenic Intergenic 179991 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr7-9506 chr7 138173205 138173415 + 6.83 0.000 Intergenic MER21A|LTR|ERVL 49552 NR_039678 100616226 NR_039678 ENSG00000284028 MIR4468 - microRNA 4468 ncRNA chr2-13143 chr2 118541520 118541730 + 6.83 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 61341 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr1-14823 chr1 74254686 74254896 + 6.83 0.000 intron (NM_015978, intron 4 of 24) MER41C|LTR|ERV1 19404 NM_015978 51086 Hs.480085 NM_015978 ENSG00000116783 TNNI3K CARK|CCDD TNNI3 interacting kinase protein-coding chr7-6309 chr7 140434397 140434607 + 6.83 0.000 Intergenic Intergenic 30444 NM_001008749 401409 Hs.583545 NM_001008749 ENSG00000146955 RAB19 RAB19B RAB19, member RAS oncogene family protein-coding chr5-3823 chr5 100566301 100566511 + 6.83 0.000 intron (NM_198507, intron 2 of 2) L1MA9|LINE|L1 31032 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr18-3361 chr18 58194904 58195114 + 6.83 0.000 promoter-TSS (NM_001144970) promoter-TSS (NM_001144970) -396 NM_001144970 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr6-2217 chr6 43356049 43356259 + 6.83 0.000 intron (NM_014345, intron 3 of 9) intron (NM_014345, intron 3 of 9) 13493 NM_014345 24149 Hs.509718 NM_014345 ENSG00000171467 ZNF318 HRIHFB2436|TZF|ZFP318 zinc finger protein 318 protein-coding chr2-14276 chr2 215454337 215454547 + 6.83 0.000 intron (NR_110607, intron 1 of 3) intron (NR_110607, intron 1 of 3) 735 NR_110607 102724849 Hs.116161 NR_110607 ENSG00000225166 LOC102724849 - uncharacterized LOC102724849 ncRNA chr12-3162 chr12 49234638 49234848 + 6.83 0.000 intron (NM_001303114, intron 1 of 3) intron (NM_001303114, intron 1 of 3) 6724 NM_001303116 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr15-4048 chr15 65236012 65236222 + 6.83 0.000 Intergenic AluSx|SINE|Alu -24644 NM_003613 8483 Hs.442180 NM_003613 ENSG00000138615 CILP CILP-1|HsT18872 cartilage intermediate layer protein protein-coding chr3-3587 chr3 58043002 58043212 + 6.83 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 34685 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr17-7717 chr17 32757913 32758123 + 6.83 0.000 intron (NM_015194, intron 10 of 21) L1MC5|LINE|L1 119106 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr3-3393 chr3 58008365 58008575 + 6.83 0.000 promoter-TSS (NM_001164317) promoter-TSS (NM_001164317) 48 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr10-9035 chr10 123376255 123376465 + 6.83 0.000 Intergenic Intergenic 221958 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr19-6657 chr19 33702836 33703046 + 6.83 0.000 intron (NM_001127895, intron 3 of 4) intron (NM_001127895, intron 3 of 4) 18413 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr15-3483 chr15 96122356 96122566 + 6.83 0.000 intron (NR_158193, intron 2 of 7) intron (NR_158193, intron 2 of 7) 5380 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr10-7822 chr10 43356590 43356800 + 6.83 0.000 Intergenic LTR8|LTR|ERV1 -14941 NM_173160 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr10-7986 chr10 60200433 60200643 + 6.83 0.000 intron (NM_001204403, intron 13 of 43) intron (NM_001204403, intron 13 of 43) -59522 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr9-5154 chr9 38330781 38330991 + 6.83 0.000 Intergenic L1M6|LINE|L1 -61816 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr2-12251 chr2 44661815 44662025 + 6.83 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 276968 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr9-3750 chr9 122852498 122852708 + 6.83 0.000 intron (NM_001100588, intron 18 of 20) SVA_D|Retroposon|SVA -24015 NM_005388 5082 Hs.271749 NM_005388 ENSG00000136940 PDCL PhLP phosducin like protein-coding chr6-6428 chr6 96152047 96152257 + 6.83 0.000 intron (NM_006581, intron 2 of 2) intron (NM_006581, intron 2 of 2) 136178 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr19-4925 chr19 43475405 43475615 + 6.83 0.000 exon (NM_198850, exon 16 of 16) exon (NM_198850, exon 16 of 16) -9902 NM_014400 27076 Hs.631594 NM_014400 ENSG00000124466 LYPD3 C4.4A LY6/PLAUR domain containing 3 protein-coding chr21-1242 chr21 45866808 45867018 + 6.83 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 16952 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr6-3918 chr6 74286335 74286545 + 6.83 0.000 intron (NR_110856, intron 1 of 3) AluJb|SINE|Alu 216989 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr10-8015 chr10 62045647 62045857 + 6.83 0.000 intron (NM_032199, intron 4 of 9) intron (NM_032199, intron 4 of 9) -3605 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr5-8321 chr5 117255927 117256137 + 6.83 0.000 Intergenic Intergenic -159480 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr3-8029 chr3 194321248 194321458 + 6.83 0.000 Intergenic AluSx1|SINE|Alu -8549 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr9-6975 chr9 108207557 108207767 + 6.83 0.000 Intergenic Intergenic 648324 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr7-7506 chr7 102036729 102036939 + 6.83 0.000 intron (NM_001913, intron 3 of 22) L1M5|LINE|L1 219208 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr15-5015 chr15 81787338 81787548 + 6.83 0.000 Intergenic Intergenic 258575 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr3-9449 chr3 49260662 49260872 + 6.83 0.000 Intergenic Intergenic -13353 NR_036233 100422952 NR_036233 ENSG00000264633 MIR4271 - microRNA 4271 ncRNA chr12-3856 chr12 107079326 107079536 + 6.83 0.000 intron (NM_004075, intron 1 of 12) MLT1K|LTR|ERVL-MaLR 14118 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr16-7016 chr16 87903556 87903766 + 6.83 0.000 intron (NR_159799, intron 2 of 5) intron (NR_159799, intron 2 of 5) 32868 NM_001367225 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr17-7454 chr17 13588923 13589133 + 6.83 0.000 intron (NM_006042, intron 1 of 1) intron (NM_006042, intron 1 of 1) 12901 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr3-6532 chr3 117471110 117471320 + 6.83 0.000 Intergenic Intergenic 219710 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr19-5394 chr19 12644975 12645185 + 6.83 0.000 Intergenic AluY|SINE|Alu 21662 NM_000528 4125 Hs.356769 NM_000528 ENSG00000104774 MAN2B1 LAMAN|MANB mannosidase alpha class 2B member 1 protein-coding chr8-3455 chr8 94195605 94195815 + 6.83 0.000 intron (NM_001144663, intron 1 of 17) intron (NM_001144663, intron 1 of 17) 12845 NM_004063 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding chr13-2933 chr13 24400967 24401177 + 6.83 0.000 Intergenic Intergenic 69622 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr20-4137 chr20 43470258 43470468 + 6.83 0.000 Intergenic L3|LINE|CR1 12467 NR_034009 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr11-3064 chr11 11960558 11960768 + 6.83 0.000 Intergenic Intergenic 47976 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr13-1659 chr13 72695178 72695388 + 6.83 0.000 Intergenic Intergenic 32346 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr12-6870 chr12 19205274 19205484 + 6.83 0.000 promoter-TSS (NM_001256787) promoter-TSS (NM_001256787) 54 NM_001256787 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr10-7447 chr10 7118337 7118547 + 6.83 0.000 Intergenic MIR|SINE|MIR 68342 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr4-6643 chr4 1972454 1972664 + 6.83 0.000 intron (NM_001042424, intron 18 of 21) intron (NM_001042424, intron 18 of 21) -2077 NR_003004 677770 Hs.676951 NR_003004 ENSG00000249784 SCARNA22 ACA11 small Cajal body-specific RNA 22 ncRNA chrX-4075 chrX 21776323 21776533 + 6.83 0.000 Intergenic L1PB1|LINE|L1 -18312 NM_014332 23676 Hs.86492 NM_014332 ENSG00000091482 SMPX DFN6|DFNX4 small muscle protein X-linked protein-coding chr5-4474 chr5 8165990 8166200 + 6.83 0.000 Intergenic L1PA13|LINE|L1 291469 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr16-6484 chr16 58418832 58419042 + 6.83 0.000 Intergenic AluSz|SINE|Alu 26466 NM_001126129 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr1-9148 chr1 19358361 19358571 + 6.83 0.000 intron (NM_001206540, intron 4 of 9) intron (NM_001206540, intron 4 of 9) 46140 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr14-4288 chr14 20177418 20177628 + 6.83 0.000 Intergenic HERV1_LTRe|LTR|ERV1 -19813 NM_001005503 390439 Hs.554582 NM_001005503 ENSG00000196832 OR11G2 OR14-34 olfactory receptor family 11 subfamily G member 2 protein-coding chr16-3347 chr16 22846551 22846761 + 6.83 0.000 intron (NM_006043, intron 1 of 1) L1ME5|LINE|L1 32494 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr15-3524 chr15 99910014 99910224 + 6.83 0.000 Intergenic Intergenic 103096 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr4-5764 chr4 63738815 63739025 + 6.83 0.000 Intergenic L1PA5|LINE|L1 670530 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr3-9758 chr3 69611359 69611569 + 6.83 0.000 Intergenic Intergenic -128000 NM_001354606 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr10-8492 chr10 89654688 89654898 + 6.83 0.000 Intergenic MSTA|LTR|ERVL-MaLR -9221 NM_148977 53354 Hs.163555 NM_138316 ENSG00000152782 PANK1 PANK pantothenate kinase 1 protein-coding chr10-1711 chr10 69932981 69933191 + 6.83 0.000 intron (NM_080801, intron 29 of 38) AluSx1|SINE|Alu -119760 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr1-7995 chr1 207850978 207851188 + 6.83 0.000 Intergenic Intergenic -28380 NR_135299 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chr15-2970 chr15 50773551 50773761 + 6.83 0.000 Intergenic L1MA7|LINE|L1 -7950 NM_032802 84888 Hs.401537 NM_032802 ENSG00000138600 SPPL2A IMP3|PSL2 signal peptide peptidase like 2A protein-coding chr2-7485 chr2 17366956 17367166 + 6.83 0.000 Intergenic L1PB1|LINE|L1 151379 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chrX-4293 chrX 42659871 42660081 + 6.83 0.000 Intergenic L1PB|LINE|L1 118187 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr11-9213 chr11 38302573 38302783 + 6.83 0.000 Intergenic Intergenic 343678 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA chr8-7532 chr8 144171595 144171805 + 6.83 0.000 intron (NM_001099281, intron 3 of 11) MER50|LTR|ERV1 23055 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr9-7761 chr9 76803920 76804130 + 6.83 0.000 intron (NM_001308048, intron 6 of 17) LTR78|LTR|ERV1 39589 NR_132313 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3|PRUNE2-AS1 prostate cancer associated 3 ncRNA chr8-4669 chr8 137846565 137846775 + 6.83 0.000 intron (NR_161374, intron 2 of 7) (TA)n|Simple_repeat|Simple_repeat 236875 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chr2-8184 chr2 88020205 88020415 + 6.83 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -34520 NM_001024457 400966 Hs.728970 NM_001024457 ENSG00000187627 RGPD1 RGP1|RGPD2|RanBP2L2 RANBP2 like and GRIP domain containing 1 protein-coding chr1-6689 chr1 53461074 53461284 + 6.83 0.000 intron (NM_033067, intron 1 of 3) intron (NM_033067, intron 1 of 3) 1780 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr1-13005 chr1 160081494 160081704 + 6.83 0.000 promoter-TSS (NM_004983) promoter-TSS (NM_004983) 61 NM_004983 3765 Hs.66726 NM_004983 ENSG00000162728 KCNJ9 GIRK3|KIR3.3 potassium voltage-gated channel subfamily J member 9 protein-coding chr5-8430 chr5 128200761 128200971 + 6.83 0.000 Intergenic Intergenic 117100 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr7-9105 chr7 106598725 106598935 + 6.83 0.000 Intergenic Intergenic 62328 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr6-7773 chr6 96522620 96522830 + 6.83 0.000 intron (NM_015323, intron 1 of 18) intron (NM_015323, intron 1 of 18) 919 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr6-2882 chr6 8258418 8258628 + 6.83 0.000 Intergenic MIRc|SINE|MIR -155928 NR_037618 100526837 Hs.719272 NR_037618 EEF1E1-BLOC1S5 EEF1E1-MUTED EEF1E1-BLOC1S5 readthrough (NMD candidate) ncRNA chrX-2083 chrX 21711264 21711474 + 6.83 0.000 intron (NM_014332, intron 4 of 4) intron (NM_014332, intron 4 of 4) 46747 NR_045617 23676 Hs.86492 NM_014332 ENSG00000091482 SMPX DFN6|DFNX4 small muscle protein X-linked protein-coding chr6-4808 chr6 79698243 79698453 + 6.83 0.000 intron (NM_031469, intron 3 of 3) intron (NM_031469, intron 3 of 3) 67019 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chr20-3771 chr20 20480847 20481057 + 6.83 0.000 intron (NM_020343, intron 36 of 39) intron (NM_020343, intron 36 of 39) 112848 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr12-7363 chr12 56581090 56581300 + 6.83 0.000 exon (NM_002898, exon 6 of 14) exon (NM_002898, exon 6 of 14) 49131 NM_001300905 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr10-3217 chr10 102462719 102462929 + 6.83 0.000 intron (NM_024789, intron 1 of 9) MIRb|SINE|MIR 1429 NM_024789 79847 Hs.309069 NM_024789 ENSG00000138111 MFSD13A C10orf77|TMEM180|bA18I14.8 major facilitator superfamily domain containing 13A protein-coding chr1-14442 chr1 46010036 46010246 + 6.83 0.000 intron (NM_001324320, intron 10 of 29) intron (NM_001324320, intron 10 of 29) 120532 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr12-6571 chr12 121565206 121565416 + 6.83 0.000 intron (NM_001005366, intron 4 of 22) L1ME3A|LINE|L1 14935 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr2-7965 chr2 63852259 63852469 + 6.83 0.000 intron (NM_006759, intron 1 of 9) MER5A|DNA|hAT-Charlie 10484 NM_006759 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr20-4144 chr20 43880103 43880313 + 6.83 0.000 Intergenic Intergenic -14510 NR_134577 105372626 Hs.130555 NR_134577 ENSG00000233277 LINC01728 - long intergenic non-protein coding RNA 1728 ncRNA chrX-1970 chrX 10103133 10103343 + 6.83 0.000 intron (NM_015691, intron 8 of 22) intron (NM_015691, intron 8 of 22) -53707 NM_001256944 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chr7-7719 chr7 451660 451870 + 6.83 0.000 Intergenic Intergenic 68079 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr2-12562 chr2 69429172 69429382 + 6.83 0.000 intron (NM_001002755, intron 2 of 7) intron (NM_001002755, intron 2 of 7) 8158 NM_001002755 27247 Hs.430439 NM_015700 ENSG00000169599 NFU1 CGI-33|HIRIP|HIRIP5|MMDS1|NIFUC|Nfu|NifU NFU1 iron-sulfur cluster scaffold protein-coding chr18-2594 chr18 21241503 21241713 + 6.83 0.000 promoter-TSS (NM_001142966) promoter-TSS (NM_001142966) -634 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr19-2527 chr19 19052701 19052911 + 6.83 0.000 intron (NM_001199196, intron 5 of 8) intron (NM_001199196, intron 5 of 8) -11188 NM_178526 284439 Hs.303669 NM_178526 ENSG00000181035 SLC25A42 MECREN solute carrier family 25 member 42 protein-coding chr10-7190 chr10 110487961 110488171 + 6.83 0.000 Intergenic Intergenic -9841 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr14-3756 chr14 48503424 48503634 + 6.83 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -708515 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr12-7148 chr12 48051523 48051733 + 6.83 0.000 intron (NR_051992, intron 14 of 18) intron (NR_051992, intron 14 of 18) -47152 NM_033150 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr12-7084 chr12 43385580 43385790 + 6.83 0.000 intron (NM_025003, intron 29 of 38) L1PA7|LINE|L1 166518 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr2-10316 chr2 147577295 147577505 + 6.83 0.000 Intergenic Intergenic -267117 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr2-14409 chr2 221179693 221179903 + 6.83 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 392506 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr10-3368 chr10 21314314 21314524 + 6.83 0.000 Intergenic Plat_L3|LINE|CR1 58531 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr11-6025 chr11 25958347 25958557 + 6.83 0.000 Intergenic Intergenic -230671 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr3-10062 chr3 107189241 107189451 + 6.83 0.000 intron (NR_028303, intron 1 of 3) MLT1A0-int|LTR|ERVL-MaLR 51292 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr13-2335 chr13 33761639 33761849 + 6.83 0.000 Intergenic Intergenic -56325 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr1-9956 chr1 79410922 79411132 + 6.83 0.000 Intergenic MER44A|DNA|TcMar-Tigger -404297 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr7-4293 chr7 22980600 22980810 + 6.83 0.000 intron (NM_032581, intron 3 of 10) intron (NM_032581, intron 3 of 10) 33425 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr10-8904 chr10 114691504 114691714 + 6.83 0.000 intron (NM_001322886, intron 1 of 20) intron (NM_001322886, intron 1 of 20) -6606 NM_001322882 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr1-13689 chr1 12626802 12627012 + 6.83 0.000 Intergenic MIRb|SINE|MIR -8697 NM_004753 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding chr20-3832 chr20 24452568 24452778 + 6.83 0.000 Intergenic L2a|LINE|L2 -16526 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr6-3397 chr6 71088395 71088605 + 6.83 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -131440 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr13-2273 chr13 28019642 28019852 + 6.83 0.000 intron (NM_004119, intron 19 of 23) intron (NM_004119, intron 19 of 23) -31110 NM_001105577 646625 Hs.705356 NM_001105577 ENSG00000183463 URAD PRHOXNB ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase protein-coding chr10-5933 chr10 120940969 120941179 + 6.83 0.000 Intergenic Intergenic 89712 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr8-6801 chr8 95535881 95536091 + 6.83 0.000 intron (NR_038207, intron 2 of 2) MamGypsy2-I|LTR|Gypsy -266785 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr5-5553 chr5 148311406 148311616 + 6.83 0.000 promoter-TSS (NM_032566) promoter-TSS (NM_032566) -912 NM_032566 84651 Hs.244569 NM_032566 ENSG00000145879 SPINK7 ECG2|ECRG2 serine peptidase inhibitor, Kazal type 7 (putative) protein-coding chr9-8354 chr9 116945596 116945806 + 6.83 0.000 intron (NM_014010, intron 9 of 21) intron (NM_014010, intron 9 of 21) 235500 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr8-3492 chr8 102568002 102568212 + 6.83 0.000 Intergenic Intergenic 16518 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr18-3458 chr18 68888364 68888574 + 6.83 0.000 intron (NM_001093729, intron 7 of 9) intron (NM_001093729, intron 7 of 9) 90389 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr2-10450 chr2 210926046 210926256 + 6.83 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 308580 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr19-3122 chr19 16247770 16247980 + 6.83 0.000 Intergenic Intergenic 49964 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr1-14669 chr1 60571924 60572134 + 6.83 0.000 intron (NR_146508, intron 4 of 7) intron (NR_146508, intron 4 of 7) 50656 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr22-4263 chr22 48573236 48573446 + 6.83 0.000 intron (NM_001082967, intron 1 of 3) HAL1ME|LINE|L1 -2999 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr21-1674 chr21 26939974 26940184 + 6.83 0.000 intron (NM_007038, intron 3 of 7) intron (NM_007038, intron 3 of 7) -13882 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 - microRNA 4759 ncRNA chr2-4309 chr2 235634832 235635042 + 6.83 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -117016 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr1-14496 chr1 49372893 49373103 + 6.83 0.000 intron (NR_136623, intron 2 of 12) AluJb|SINE|Alu 99087 NR_046839 100874313 Hs.551277 NR_046839 ENSG00000225623 AGBL4-IT1 - AGBL4 intronic transcript 1 ncRNA chr3-7186 chr3 188932309 188932519 + 6.83 0.000 Intergenic Intergenic 15225 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr8-6936 chr8 103994031 103994241 + 6.83 0.000 intron (NR_145711, intron 14 of 21) intron (NR_145711, intron 14 of 21) 174916 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr1-16060 chr1 202035603 202035813 + 6.83 0.000 Intergenic AluSx1|SINE|Alu 25121 NM_001114309 1999 Hs.603657 NM_004433 ENSG00000163435 ELF3 EPR-1|ERT|ESE-1|ESX E74 like ETS transcription factor 3 protein-coding chr7-8219 chr7 32837167 32837377 + 6.83 0.000 intron (NR_132360, intron 5 of 5) HERVH-int|LTR|ERV1 10970 NR_132360 102724668 Hs.636806 NR_132360 DPY19L1P2 THC1072510 DPY19L1 pseudogene 2 pseudo chr17-6614 chr17 61580808 61581018 + 6.83 0.000 Intergenic Intergenic 10306 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr1-8299 chr1 43625698 43625908 + 6.83 0.000 Intergenic L2c|LINE|L2 -24346 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr7-5875 chr7 92329702 92329912 + 6.83 0.000 intron (NM_019004, intron 5 of 19) L2c|LINE|L2 -83707 NM_001350682 889 Hs.531987 NM_004912 ENSG00000001631 KRIT1 CAM|CCM1 KRIT1 ankyrin repeat containing protein-coding chr8-3746 chr8 22633657 22633867 + 6.83 0.000 intron (NM_001363046, intron 3 of 7) MER5A|DNA|hAT-Charlie 8447 NR_027715 80094 Hs.675917 NM_025026 BIN3-IT1 - BIN3 intronic transcript 1 ncRNA chr16-6414 chr16 55680996 55681206 + 6.83 0.000 intron (NM_001172504, intron 3 of 13) intron (NM_001172504, intron 3 of 13) 9430 NM_001172502 6530 Hs.78036 NM_001043 ENSG00000103546 SLC6A2 NAT1|NET|NET1|SLC6A5 solute carrier family 6 member 2 protein-coding chr19-4245 chr19 53752006 53752216 + 6.83 0.000 promoter-TSS (NR_030218) promoter-TSS (NR_030218) -286 NR_030218 574496 NR_030218 ENSG00000207992 MIR519A1 MIRN519A-1|MIRN519A1|mir-519a-1 microRNA 519a-1 ncRNA chr12-6463 chr12 96314736 96314946 + 6.83 0.000 intron (NM_002595, intron 3 of 16) L2b|LINE|L2 59343 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr3-10097 chr3 110773408 110773618 + 6.83 0.000 Intergenic Intergenic 296446 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr20-2758 chr20 51134584 51134794 + 6.83 0.000 Intergenic MER49|LTR|ERV1 -111582 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr10-8174 chr10 71344394 71344604 + 6.83 0.000 intron (NM_018344, intron 3 of 5) intron (NM_018344, intron 3 of 5) 25240 NM_018344 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr6-7469 chr6 56868669 56868879 + 6.83 0.000 intron (NM_001144769, intron 3 of 96) intron (NM_001144769, intron 3 of 96) -16858 NM_001144770 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr13-4348 chr13 102944871 102945081 + 6.83 0.000 Intergenic Intergenic 64877 NR_026965 121952 Hs.660773 NR_026965 ENSG00000250878 METTL21EP METTL21CP1 methyltransferase like 21E, pseudogene pseudo chr3-9131 chr3 31255395 31255605 + 6.83 0.000 Intergenic L2b|LINE|L2 -93713 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr3-8439 chr3 117662023 117662233 + 6.83 0.000 Intergenic Intergenic 28797 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr21-1432 chr21 24343806 24344016 + 6.83 0.000 Intergenic Intergenic -22534 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr2-12854 chr2 96497641 96497851 + 6.83 0.000 TTS (NM_001285486) TTS (NM_001285486) 7611 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr7-8086 chr7 25203091 25203301 + 6.83 0.000 Intergenic L1MCb|LINE|L1 -22842 NM_001371351 chr6-5547 chr6 169168072 169168282 + 6.83 0.000 Intergenic Intergenic -5188 NR_132623 101929484 Hs.364166 NR_132622 ENSG00000223485 LINC01615 - long intergenic non-protein coding RNA 1615 ncRNA chr17-5734 chr17 58111296 58111506 + 6.83 0.000 Intergenic AluSx1|SINE|Alu 27982 NM_080677 140735 Hs.720595 NM_080677 ENSG00000264364 DYNLL2 DNCL1B|Dlc2|RSPH22 dynein light chain LC8-type 2 protein-coding chr9-5049 chr9 31991401 31991611 + 6.83 0.000 Intergenic L1PA6|LINE|L1 -393097 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chrX-2904 chrX 150486249 150486459 + 6.83 0.000 intron (NM_005491, intron 4 of 6) MLT1L|LTR|ERVL-MaLR 40900 NM_005491 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr5-6579 chr5 24975305 24975515 + 6.83 0.000 Intergenic MER67D|LTR|ERV1 -134827 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA chr2-13393 chr2 138996431 138996641 + 6.83 0.000 Intergenic Intergenic 99212 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr13-4223 chr13 94496635 94496845 + 6.83 0.000 intron (NM_001322184, intron 1 of 8) intron (NM_001322184, intron 1 of 8) -17058 NM_001129889 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr6-4651 chr6 49887199 49887409 + 6.83 0.000 Intergenic HERVK22-int|LTR|ERVK -10208 NM_001205220 167 Hs.109620 NM_001131 ENSG00000124812 CRISP1 AEGL1|ARP|CRISP-1|HEL-S-57|HSCRISP1D|HSCRISP1G|HUMARP cysteine rich secretory protein 1 protein-coding chr3-8088 chr3 13177128 13177338 + 6.83 0.000 Intergenic Intergenic -103804 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr1-13985 chr1 25436582 25436792 + 6.83 0.000 intron (NM_018202, intron 1 of 10) intron (NM_018202, intron 1 of 10) 5790 NM_018202 55219 Hs.189782 NM_018202 ENSG00000204178 MACO1 MACOILIN|TMEM57 macoilin 1 protein-coding chr5-2005 chr5 7372372 7372582 + 6.83 0.000 Intergenic (CCA)n|Simple_repeat|Simple_repeat -23661 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chrX-685 chrX 24529770 24529980 + 6.83 0.000 intron (NM_001142386, intron 9 of 11) L2c|LINE|L2 64589 NM_001142386 5165 Hs.296031 NM_005391 ENSG00000067992 PDK3 CMTX6|GS1-358P8.4 pyruvate dehydrogenase kinase 3 protein-coding chr2-12992 chr2 105945493 105945703 + 6.83 0.000 Intergenic L1M2|LINE|L1 93751 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr11-4775 chr11 122307141 122307351 + 6.83 0.000 intron (NR_137179, intron 1 of 4) intron (NR_137179, intron 1 of 4) 2241 NR_137180 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr11-7560 chr11 19801053 19801263 + 6.83 0.000 intron (NM_182964, intron 1 of 37) intron (NM_182964, intron 1 of 37) -41075 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr6-2205 chr6 40499694 40499904 + 6.83 0.000 intron (NM_020737, intron 1 of 2) MIR|SINE|MIR 87565 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr18-2447 chr18 33493687 33493897 + 6.83 0.000 Intergenic MSTB2|LTR|ERVL-MaLR -52752 NM_001371120 chr9-7491 chr9 29969447 29969657 + 6.83 0.000 Intergenic MER52A|LTR|ERV1 438902 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr4-7061 chr4 30224675 30224885 + 6.83 0.000 Intergenic Intergenic -495589 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr13-1564 chr13 33250770 33250980 + 6.83 0.000 intron (NM_001243476, intron 5 of 17) L2b|LINE|L2 -26679 NR_046693 100874241 Hs.662433 NR_046693 ENSG00000236581 STARD13-AS STARD13-AS2 STARD13 antisense RNA ncRNA chr19-6742 chr19 38516280 38516490 + 6.83 0.000 intron (NM_001042723, intron 65 of 104) intron (NM_001042723, intron 65 of 104) -79962 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr15-4525 chr15 54636124 54636334 + 6.83 0.000 Intergenic Intergenic -420518 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr19-6169 chr19 4602794 4603004 + 6.83 0.000 Intergenic (GGAT)n|Simple_repeat|Simple_repeat -36617 NM_152362 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr11-8804 chr11 11367636 11367846 + 6.83 0.000 intron (NM_198516, intron 6 of 10) intron (NM_198516, intron 6 of 10) -14491 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr7-8943 chr7 97024260 97024470 + 6.83 0.000 exon (NM_005221, exon 1 of 3) exon (NM_005221, exon 1 of 3) 466 NM_005221 1749 Hs.99348 NM_005221 ENSG00000105880 DLX5 SHFM1D distal-less homeobox 5 protein-coding chr9-7827 chr9 82604772 82604982 + 6.83 0.000 Intergenic Intergenic 458265 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr2-10021 chr2 26209336 26209546 + 6.83 0.000 intron (NM_000182, intron 11 of 19) intron (NM_000182, intron 11 of 19) 28725 NM_001191033 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr12-5241 chr12 108773490 108773700 + 6.83 0.000 Intergenic Intergenic -42045 NM_014325 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr21-624 chr21 42374087 42374297 + 6.83 0.000 intron (NM_032404, intron 9 of 9) intron (NM_032404, intron 9 of 9) -7657 NM_003225 7031 Hs.162807 NM_003225 ENSG00000160182 TFF1 BCEI|D21S21|HP1.A|HPS2|pNR-2|pS2 trefoil factor 1 protein-coding chr10-7673 chr10 28381828 28382038 + 6.83 0.000 Intergenic Intergenic -78869 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr5-4831 chr5 61560589 61560799 + 6.83 0.000 Intergenic Intergenic -77066 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr2-10328 chr2 154477943 154478153 + 6.83 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -20610 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr12-8175 chr12 121906059 121906269 + 6.83 0.000 intron (NR_048555, intron 3 of 4) Charlie15a|DNA|hAT-Charlie -12428 NM_144668 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr9-5447 chr9 97806037 97806247 + 6.83 0.000 intron (NR_147055, intron 2 of 10) intron (NR_147055, intron 2 of 10) 46938 NR_147055 101928337 NR_147055 ENSG00000236130 PTCSC2 - papillary thyroid carcinoma susceptibility candidate 2 ncRNA chr2-11868 chr2 22651817 22652027 + 6.83 0.000 Intergenic Intergenic 115443 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr3-10447 chr3 132788514 132788724 + 6.83 0.000 intron (NR_002811, intron 3 of 10) intron (NR_002811, intron 3 of 10) -66160 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr5-7279 chr5 14114585 14114795 + 6.83 0.000 Intergenic Intergenic -28652 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr1-15384 chr1 150898058 150898268 + 6.83 0.000 intron (NR_148929, intron 1 of 1) intron (NR_148929, intron 1 of 1) 10910 NR_148929 100996521 Hs.208452 NR_148929 CTXND2 - cortexin domain containing 2 ncRNA chr11-3224 chr11 68580332 68580542 + 6.83 0.000 intron (NR_147968, intron 14 of 23) L2a|LINE|L2 -104107 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr11-4771 chr11 119153554 119153764 + 6.83 0.000 intron (NM_001348192, intron 3 of 15) L2c|LINE|L2 4070 NM_001142505 64137 Hs.126378 NM_022169 ENSG00000172350 ABCG4 WHITE2 ATP binding cassette subfamily G member 4 protein-coding chr3-9945 chr3 89939639 89939849 + 6.83 0.000 Intergenic L1PA3|LINE|L1 832123 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr20-2873 chr20 62765033 62765243 + 6.83 0.000 Intergenic Intergenic 11718 NR_046224 100652730 Hs.254951 NR_046224 LINC00659 - long intergenic non-protein coding RNA 659 ncRNA chr17-8276 chr17 67628835 67629045 + 6.83 0.000 intron (NM_181671, intron 5 of 9) LTR41B|LTR|ERVL -88893 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr22-3254 chr22 44713917 44714127 + 6.83 0.000 intron (NM_181334, intron 1 of 14) AluY|SINE|Alu 11818 NM_181333 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr1-10674 chr1 185073382 185073592 + 6.83 0.000 intron (NM_007212, intron 1 of 6) intron (NM_007212, intron 1 of 6) 27929 NM_007212 6045 Hs.591490 NM_007212 ENSG00000121481 RNF2 BAP-1|BAP1|DING|HIPI3|RING1B|RING2 ring finger protein 2 protein-coding chr2-6244 chr2 37665658 37665868 + 6.83 0.000 intron (NM_001270436, intron 1 of 1) intron (NM_001270436, intron 1 of 1) 6436 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr8-5719 chr8 131917184 131917394 + 6.83 0.000 intron (NM_001323557, intron 1 of 22) intron (NM_001323557, intron 1 of 22) 516 NM_001323556 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr17-2449 chr17 32108945 32109155 + 6.83 0.000 Intergenic AluJr|SINE|Alu -33404 NM_001288758 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding chr9-8445 chr9 122360337 122360547 + 6.83 0.000 Intergenic Intergenic -10091 NM_001271166 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr9-4319 chr9 126174548 126174758 + 6.83 0.000 Intergenic Intergenic 101262 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr1-15542 chr1 157653119 157653329 + 6.83 0.000 Intergenic Intergenic 47545 NR_135217 115352 Hs.292449 NM_052939 ENSG00000160856 FCRL3 CD307c|FCRH3|IFGP3|IRTA3|SPAP2 Fc receptor like 3 protein-coding chr16-6328 chr16 49507293 49507503 + 6.83 0.000 intron (NM_001271620, intron 7 of 7) AluJr|SINE|Alu 11187 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr4-3674 chr4 41280236 41280446 + 6.83 0.000 Intergenic Intergenic 23413 NM_004181 7345 Hs.518731 NM_004181 ENSG00000154277 UCHL1 HEL-117|HEL-S-53|NDGOA|PARK5|PGP 9.5|PGP9.5|PGP95|SPG79|Uch-L1 ubiquitin C-terminal hydrolase L1 protein-coding chr19-6611 chr19 29189828 29190038 + 6.83 0.000 Intergenic MIRb|SINE|MIR 23218 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr3-7559 chr3 196230170 196230380 + 6.83 0.000 intron (NM_152672, intron 7 of 8) MLT1C|LTR|ERVL-MaLR 13741 NM_152672 200931 Hs.630585 NM_152672 ENSG00000163959 SLC51A OSTA|OSTalpha solute carrier family 51 alpha subunit protein-coding chr14-3272 chr14 79602260 79602470 + 6.83 0.000 intron (NR_073547, intron 15 of 20) intron (NR_073547, intron 15 of 20) 322985 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr5-4951 chr5 76952906 76953116 + 6.83 0.000 promoter-TSS (NM_001882) promoter-TSS (NM_001882) -34 NM_001882 1393 Hs.115617 NM_001882 ENSG00000145708 CRHBP CRF-BP|CRFBP corticotropin releasing hormone binding protein protein-coding chr8-6352 chr8 52491491 52491701 + 6.83 0.000 Intergenic LTR1D1|LTR|ERV1 73834 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr3-8506 chr3 131430466 131430676 + 6.83 0.000 Intergenic AluJo|SINE|Alu 48662 NR_002985 677836 Hs.735762 NR_002985 SNORA58 ACA58|SNORA58B small nucleolar RNA, H/ACA box 58 snoRNA chr2-7932 chr2 60225997 60226207 + 6.83 0.000 Intergenic Intergenic 156934 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr10-3091 chr10 15370394 15370604 + 6.83 0.000 intron (NM_001010924, intron 1 of 7) CpG 790 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr8-4176 chr8 80378130 80378340 + 6.83 0.000 Intergenic Intergenic -107358 NM_001277145 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr6-3584 chr6 72713031 72713241 + 6.83 0.000 intron (NM_001160132, intron 1 of 13) intron (NM_001160132, intron 1 of 13) 82641 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr11-3344 chr11 119195743 119195953 + 6.83 0.000 promoter-TSS (NM_001145018) promoter-TSS (NM_001145018) -7 NM_001145018 283152 Hs.114777 NM_001033658 ENSG00000248712 CCDC153 - coiled-coil domain containing 153 protein-coding chr3-9275 chr3 41694328 41694538 + 6.83 0.000 intron (NR_136342, intron 25 of 34) intron (NR_136342, intron 25 of 34) 267670 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr10-4695 chr10 132920526 132920736 + 6.83 0.000 intron (NM_001200049, intron 13 of 57) intron (NM_001200049, intron 13 of 57) 21939 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr17-4360 chr17 15877441 15877651 + 6.83 0.000 Intergenic HAL1|LINE|L1 -59804 NR_110839 101928567 Hs.569757 NR_110839 ENSG00000237057 LINC02087 - long intergenic non-protein coding RNA 2087 ncRNA chr17-7076 chr17 66215073 66215283 + 6.83 0.000 intron (NM_000042, intron 6 of 7) LTR16A1|LTR|ERVL 14237 NM_000042 350 Hs.445358 NM_000042 ENSG00000091583 APOH B2G1|B2GP1|BG apolipoprotein H protein-coding chr2-2472 chr2 113235550 113235760 + 6.83 0.000 promoter-TSS (NR_015377) promoter-TSS (NR_015377) 128 NR_047570 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr15-1852 chr15 55439788 55439998 + 6.83 0.000 intron (NM_001033560, intron 6 of 8) MLT1A|LTR|ERVL-MaLR -31383 NM_001204450 9236 Hs.285051 NM_004748 ENSG00000260916 CCPG1 CPR8 cell cycle progression 1 protein-coding chr20-3140 chr20 36422446 36422656 + 6.83 0.000 intron (NM_001365621, intron 2 of 12) intron (NM_001365621, intron 2 of 12) -38917 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr2-7172 chr2 204039916 204040126 + 6.83 0.000 Intergenic Intergenic 103273 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr5-5689 chr5 161763650 161763860 + 6.83 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 78034 NM_000811 2559 Hs.90791 NM_000811 ENSG00000145863 GABRA6 - gamma-aminobutyric acid type A receptor alpha6 subunit protein-coding chr9-5245 chr9 78131988 78132198 + 6.83 0.000 Intergenic Intergenic -100282 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr6-6791 chr6 4489827 4490037 + 6.83 0.000 intron (NR_149117, intron 3 of 4) intron (NR_149117, intron 3 of 4) 1134 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chrX-5262 chrX 138760511 138760721 + 6.83 0.000 intron (NM_001139498, intron 2 of 5) intron (NM_001139498, intron 2 of 5) -21263 NM_033642 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr1-11041 chr1 223269241 223269451 + 6.83 0.000 intron (NM_017982, intron 3 of 8) intron (NM_017982, intron 3 of 8) 94830 NM_001037175 55061 Hs.497841 NM_017982 ENSG00000143502 SUSD4 PRO222 sushi domain containing 4 protein-coding chr9-7356 chr9 15804731 15804941 + 6.83 0.000 intron (NM_001355547, intron 20 of 24) L1PA11|LINE|L1 240858 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr5-7396 chr5 24351281 24351491 + 6.83 0.000 Intergenic LTR1F2|LTR|ERV1 293592 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr8-4367 chr8 101906009 101906219 + 6.83 0.000 intron (NM_001040624, intron 4 of 7) intron (NM_001040624, intron 4 of 7) -78318 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr17-5428 chr17 35390117 35390327 + 6.83 0.000 Intergenic L1PREC2|LINE|L1 -16601 NM_001104589 91607 Hs.745059 NM_152270 ENSG00000172716 SLFN11 SLFN8/9 schlafen family member 11 protein-coding chr15-3050 chr15 60353580 60353790 + 6.83 0.000 intron (NM_001002857, intron 9 of 13) MLT1F|LTR|ERVL-MaLR 44301 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr17-3773 chr17 34756743 34756953 + 6.83 0.000 Intergenic Intergenic 176099 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr6-4168 chr6 1127158 1127368 + 6.83 0.000 Intergenic Intergenic -25931 NR_027116 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr17-3511 chr17 59427515 59427725 + 6.83 0.000 Intergenic Intergenic 61537 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chr13-2075 chr13 64702856 64703066 + 6.83 0.000 Intergenic AluSg4|SINE|Alu -626950 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr14-2857 chr14 30720140 30720350 + 6.83 0.000 intron (NM_016106, intron 21 of 24) intron (NM_016106, intron 21 of 24) 97926 NM_001257376 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr11-7095 chr11 122556816 122557026 + 6.83 0.000 Intergenic LTR12D|LTR|ERV1 -98801 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr5-8358 chr5 121026298 121026508 + 6.83 0.000 Intergenic Intergenic -296147 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr10-6331 chr10 118962782 118962992 + 6.83 0.000 Intergenic MER41A|LTR|ERV1 -66827 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr5-6123 chr5 31894054 31894264 + 6.83 0.000 intron (NM_178140, intron 2 of 24) AluSq2|SINE|Alu 42000 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr8-6322 chr8 47859770 47859980 + 6.83 0.000 intron (NM_001081640, intron 45 of 84) intron (NM_001081640, intron 45 of 84) 100261 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr18-2744 chr18 79381223 79381433 + 6.83 0.000 Intergenic Intergenic -14602 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr16-6312 chr16 48153568 48153778 + 6.83 0.000 Intergenic Intergenic -6903 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr11-9741 chr11 68729813 68730023 + 6.83 0.000 intron (NM_004923, intron 6 of 9) Tigger1|DNA|TcMar-Tigger 21602 NM_004923 9633 Hs.145932 NM_004923 ENSG00000132749 TESMIN CXCDC2|MTL5|MTLT testis expressed metallothionein like protein protein-coding chr7-5854 chr7 89636273 89636483 + 6.83 0.000 Intergenic L1MA4A|LINE|L1 -483022 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr4-7504 chr4 74266114 74266324 + 6.83 0.000 intron (NR_147097, intron 8 of 9) intron (NR_147097, intron 8 of 9) -42251 NM_001270991 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr8-3130 chr8 64774033 64774243 + 6.83 0.000 intron (NM_004820, intron 1 of 5) L2c|LINE|L2 24599 NM_001324112 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr5-7851 chr5 72085723 72085933 + 6.83 0.000 Intergenic Intergenic -21647 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr7-6332 chr7 145169099 145169309 + 6.83 0.000 Intergenic (CACACA)n|Simple_repeat|Simple_repeat -333151 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr3-6773 chr3 142501918 142502128 + 6.83 0.000 intron (NM_001354579, intron 29 of 45) AluSz6|SINE|Alu -53961 NM_001282859 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr16-6285 chr16 31495357 31495567 + 6.83 0.000 intron (NM_022744, intron 6 of 12) intron (NM_022744, intron 6 of 12) 12339 NR_130783 6524 Hs.709195 NM_003041 ENSG00000140675 SLC5A2 SGLT2 solute carrier family 5 member 2 protein-coding chr10-8481 chr10 89084553 89084763 + 6.83 0.000 Intergenic Intergenic -21247 NR_039827 100616192 NR_039827 ENSG00000265375 MIR4679-2 - microRNA 4679-2 ncRNA chr22-2317 chr22 38650760 38650970 + 6.83 0.000 intron (NM_001013647, intron 1 of 16) intron (NM_001013647, intron 1 of 16) 5527 NM_001013647 646851 Hs.542707 NM_001013647 ENSG00000184949 FAM227A - family with sequence similarity 227 member A protein-coding chr22-3514 chr22 49842932 49843142 + 6.83 0.000 Intergenic AluSq|SINE|Alu -10807 NM_014838 9889 Hs.475208 NM_014838 ENSG00000100426 ZBED4 - zinc finger BED-type containing 4 protein-coding chr19-6684 chr19 35315945 35316155 + 6.83 0.000 Intergenic MER1A|DNA|hAT-Charlie -13119 NM_001185101 933 Hs.579691 NM_001771 ENSG00000012124 CD22 SIGLEC-2|SIGLEC2 CD22 molecule protein-coding chr2-14571 chr2 231483533 231483743 + 6.83 0.000 Intergenic Intergenic -19154 NM_005381 4691 Hs.79110 NM_005381 ENSG00000115053 NCL C23|Nsr1 nucleolin protein-coding chr3-7042 chr3 173101062 173101272 + 6.83 0.000 intron (NM_031955, intron 2 of 10) intron (NM_031955, intron 2 of 10) 40068 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr8-4571 chr8 127694174 127694384 + 6.83 0.000 Intergenic MIRb|SINE|MIR 39688 NR_117102 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLO7|CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility 11 ncRNA chrX-2681 chrX 118068800 118069010 + 6.83 0.000 intron (NM_001168301, intron 1 of 7) L1M2a|LINE|L1 47960 NM_001168303 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr14-2955 chr14 49683799 49684009 + 6.83 0.000 intron (NM_001348385, intron 1 of 18) intron (NM_001348385, intron 1 of 18) 4310 NM_001197331 5427 Hs.162777 NM_002692 ENSG00000100479 POLE2 DPE2 DNA polymerase epsilon 2, accessory subunit protein-coding chr4-4320 chr4 31906024 31906234 + 6.83 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -91250 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA chr16-7004 chr16 87736149 87736359 + 6.83 0.000 intron (NM_001351938, intron 4 of 10) Tigger3a|DNA|TcMar-Tigger 29732 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr8-5560 chr8 76562563 76562773 + 6.83 0.000 Intergenic Intergenic -118579 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr4-6545 chr4 177516543 177516753 + 6.83 0.000 Intergenic AluSc|SINE|Alu -74145 NR_033655 175 Hs.207776 NM_000027 ENSG00000038002 AGA AGU|ASRG|GA aspartylglucosaminidase protein-coding chr8-7539 chr8 144437862 144438072 + 6.83 0.000 intron (NR_109770, intron 3 of 5) AluJb|SINE|Alu -2348 NR_106953 102466271 NR_106953 ENSG00000276598 MIR6893 hsa-mir-6893 microRNA 6893 ncRNA chr4-3018 chr4 127937078 127937288 + 6.83 0.000 intron (NM_001363521, intron 4 of 8) intron (NM_001363521, intron 4 of 8) 27990 NM_001363521 256471 Hs.480701 NM_152778 ENSG00000164073 MFSD8 CCMD|CLN7 major facilitator superfamily domain containing 8 protein-coding chr13-808 chr13 20161299 20161509 + 6.83 0.000 promoter-TSS (NM_021954) promoter-TSS (NM_021954) -352 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr2-8976 chr2 190559678 190559888 + 6.83 0.000 Intergenic Intergenic -25061 NM_001142645 100131211 Hs.659824 NM_001142645 ENSG00000189362 NEMP2 TMEM194B nuclear envelope integral membrane protein 2 protein-coding chr4-6294 chr4 83332080 83332290 + 6.83 0.000 intron (NM_001098540, intron 1 of 11) intron (NM_001098540, intron 1 of 11) 2628 NM_001199830 10855 Hs.44227 NM_006665 ENSG00000173083 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding chr12-7799 chr12 97931041 97931251 + 6.83 0.000 Intergenic L1MA10|LINE|L1 7975 NR_039716 100616287 NR_039716 ENSG00000265861 MIR4495 - microRNA 4495 ncRNA chr1-16628 chr1 239585448 239585658 + 6.83 0.000 intron (NM_001347716, intron 3 of 7) intron (NM_001347716, intron 3 of 7) -43520 NM_000740 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr17-6211 chr17 7115070 7115280 + 6.83 0.000 promoter-TSS (NM_001181) promoter-TSS (NM_001181) -364 NM_001201352 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chr7-3839 chr7 100194146 100194356 + 6.83 0.000 intron (NM_012447, intron 8 of 33) Tigger1|DNA|TcMar-Tigger 16333 NM_001282718 10734 Hs.592283 NM_012447 ENSG00000066923 STAG3 - stromal antigen 3 protein-coding chr9-4987 chr9 20838273 20838483 + 6.83 0.000 intron (NM_017794, intron 17 of 45) intron (NM_017794, intron 17 of 45) 51451 NR_145762 109616992 NR_145762 ENSG00000202189 SNORA30B - small nucleolar RNA, H/ACA box 30B snoRNA chr10-1954 chr10 17616958 17617168 + 6.83 0.000 intron (NM_014241, intron 1 of 6) CpG 311 NM_014241 9200 Hs.114062 NM_014241 ENSG00000165996 HACD1 CAP|PTPLA 3-hydroxyacyl-CoA dehydratase 1 protein-coding chr6-6710 chr6 1002063 1002273 + 6.83 0.000 intron (NR_027115, intron 2 of 4) intron (NR_027115, intron 2 of 4) 99164 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr10-5587 chr10 92303858 92304068 + 6.83 0.000 intron (NM_017824, intron 1 of 5) intron (NM_017824, intron 1 of 5) 12796 NM_017824 54708 Hs.573490 NM_017824 ENSG00000198060 MARCH5 MARCH-V|MITOL|RNF153 membrane associated ring-CH-type finger 5 protein-coding chr7-9238 chr7 120729529 120729739 + 6.83 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 128510 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr17-1275 chr17 75271096 75271306 + 6.83 0.000 promoter-TSS (NM_001363806) promoter-TSS (NM_001363806) 29 NM_020679 57409 Hs.325631 NM_020679 ENSG00000125457 MIF4GD AD023|MIFD|SLIP1 MIF4G domain containing protein-coding chr1-12930 chr1 119361424 119361634 + 6.83 0.000 Intergenic MIRb|SINE|MIR -7256 NM_016527 51179 Hs.659767 NM_016527 ENSG00000116882 HAO2 GIG16|HAOX2 hydroxyacid oxidase 2 protein-coding chr20-3527 chr20 561685 561895 + 6.83 0.000 Intergenic Intergenic -18000 NM_177560 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|Cka1|Cka2|OCNDS casein kinase 2 alpha 1 protein-coding chr1-16438 chr1 226765568 226765778 + 6.83 0.000 Intergenic AluSz|SINE|Alu -26498 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr3-8654 chr3 177507205 177507415 + 6.83 0.000 intron (NR_047568, intron 1 of 3) MSTD-int|LTR|ERVL-MaLR 65389 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr11-7502 chr11 4247179 4247389 + 6.83 0.000 Intergenic MER106B|DNA|hAT-Charlie 60132 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LINC02749 - long intergenic non-protein coding RNA 2749 ncRNA chr18-1145 chr18 9613952 9614162 + 6.83 0.000 promoter-TSS (NR_110773) promoter-TSS (NR_110773) 502 NM_005134 9989 Hs.743236 NM_005134 ENSG00000154845 PPP4R1 MEG1|PP4(Rmeg)|PP4R1 protein phosphatase 4 regulatory subunit 1 protein-coding chr14-2629 chr14 64455801 64456011 + 6.83 0.000 intron (NM_001364837, intron 26 of 26) intron (NM_001364837, intron 26 of 26) -9593 NM_004857 9495 Hs.656683 NM_004857 ENSG00000179841 AKAP5 AKAP75|AKAP79|H21 A-kinase anchoring protein 5 protein-coding chr8-6351 chr8 52365576 52365786 + 6.83 0.000 intron (NR_148195, intron 2 of 3) intron (NR_148195, intron 2 of 3) 44075 NM_001352883 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr9-5155 chr9 38418748 38418958 + 6.83 0.000 intron (NM_001007563, intron 1 of 4) MIRc|SINE|MIR 5601 NM_001007563 347252 Hs.349705 NM_001007563 ENSG00000137142 IGFBPL1 IGFBP-RP4|IGFBPRP4|bA113O24.1 insulin like growth factor binding protein like 1 protein-coding chr4-4949 chr4 127526657 127526867 + 6.83 0.000 Intergenic Intergenic -106195 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr5-3045 chr5 18754224 18754434 + 6.83 0.000 Intergenic LTR1B|LTR|ERV1 947055 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr2-6249 chr2 40489594 40489804 + 6.83 0.000 intron (NM_001112802, intron 1 of 7) intron (NM_001112802, intron 1 of 7) 22736 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr2-13839 chr2 176696392 176696602 + 6.83 0.000 Intergenic AluSp|SINE|Alu 58743 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr18-2072 chr18 48310772 48310982 + 6.83 0.000 intron (NM_001371290, intron 5 of 9) intron (NM_001371290, intron 5 of 9) 58576 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr6-6214 chr6 16495043 16495253 + 6.83 0.000 intron (NM_000332, intron 6 of 8) intron (NM_000332, intron 6 of 8) 256561 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr2-10813 chr2 50347367 50347577 + 6.83 0.000 5' UTR (NM_138735, exon 1 of 6) 5' UTR (NM_138735, exon 1 of 6) 282 NM_001330092 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr19-5210 chr19 29562376 29562586 + 6.83 0.000 intron (NM_001146339, intron 4 of 4) intron (NM_001146339, intron 4 of 4) 35897 NM_001146339 342865 Hs.451618 NM_001146339 ENSG00000187135 VSTM2B - V-set and transmembrane domain containing 2B protein-coding chr18-3115 chr18 36728748 36728958 + 6.83 0.000 intron (NM_001281740, intron 19 of 28) intron (NM_001281740, intron 19 of 28) -65435 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr2-8667 chr2 149235016 149235226 + 6.83 0.000 Intergenic Intergenic -94864 NM_001195685 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr7-3741 chr7 72949493 72949703 + 6.83 0.000 3' UTR (NM_001257190, exon 16 of 16) 3' UTR (NM_001257190, exon 16 of 16) 5165 NR_033323 260294 Hs.510927 NM_148936 ENSG00000106133 NSUN5P2 NOL1R2|NSUN5C|WBSCR20B|WBSCR20C NSUN5 pseudogene 2 pseudo chr6-8540 chr6 161184917 161185127 + 6.83 0.000 intron (NM_020133, intron 2 of 8) L1MC5a|LINE|L1 -23040 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr3-6469 chr3 108333903 108334113 + 6.83 0.000 intron (NM_001370244, intron 2 of 9) intron (NM_001370244, intron 2 of 9) 22223 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr9-6601 chr9 127349509 127349719 + 6.83 0.000 intron (NR_104591, intron 17 of 26) L3|LINE|CR1 -47524 NM_001271711 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr19-3358 chr19 10799151 10799361 + 6.83 0.000 intron (NM_001005362, intron 11 of 19) L1ME1|LINE|L1 18240 NR_029586 406976 NR_029586 ENSG00000207752 MIR199A1 MIR-199-s|MIRN199A1|mir-199a-1 microRNA 199a-1 ncRNA chr3-9198 chr3 36440211 36440421 + 6.83 0.000 intron (NM_001292049, intron 1 of 8) MLT1H|LTR|ERVL-MaLR 59829 NM_003149 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr14-2602 chr14 54403473 54403683 + 6.83 0.000 intron (NM_001330173, intron 3 of 8) L1P2|LINE|L1 6571 NM_005192 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr10-7062 chr10 86358327 86358537 + 6.83 0.000 intron (NM_017551, intron 2 of 15) MLT1D|LTR|ERVL-MaLR 8363 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr1-14958 chr1 88176676 88176886 + 6.83 0.000 Intergenic Intergenic -507363 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr10-8972 chr10 119227775 119227985 + 6.83 0.000 intron (NM_005308, intron 1 of 15) L1ME4a|LINE|L1 20309 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr7-7481 chr7 98229576 98229786 + 6.83 0.000 intron (NM_015395, intron 15 of 25) intron (NM_015395, intron 15 of 25) 17427 NM_177455 168620 Hs.511979 NM_177455 ENSG00000180535 BHLHA15 BHLHB8|MIST1 basic helix-loop-helix family member a15 protein-coding chr8-6468 chr8 61951066 61951276 + 6.83 0.000 Intergenic AluSx1|SINE|Alu 61332 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr12-4891 chr12 65180884 65181094 + 6.83 0.000 intron (NM_001167614, intron 1 of 12) (AC)n|Simple_repeat|Simple_repeat 11406 NM_001167614 23592 Hs.744150 NM_014319 ENSG00000174106 LEMD3 MAN1 LEM domain containing 3 protein-coding chr4-5731 chr4 47737151 47737361 + 6.83 0.000 intron (NM_006587, intron 5 of 21) L1MB7|LINE|L1 84587 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA chr13-2563 chr13 66558568 66558778 + 6.83 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) -266496 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr12-8098 chr12 118726202 118726412 + 6.83 0.000 Intergenic MER74C|LTR|ERVL 35372 NR_134998 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA chr9-7398 chr9 19946583 19946793 + 6.83 0.000 Intergenic Intergenic -159669 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr7-5944 chr7 100226070 100226280 + 6.83 0.000 intron (NR_028038, intron 2 of 6) AluJr|SINE|Alu 6927 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr3-10405 chr3 130063744 130063954 + 6.83 0.000 Intergenic HERVH-int|LTR|ERV1 -17982 NM_001136152 644974 Hs.722197 NM_001136152 ENSG00000251287 ALG1L2 - ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2 protein-coding chr8-5342 chr8 15101737 15101947 + 6.83 0.000 intron (NM_139167, intron 1 of 7) AluSz|SINE|Alu 136589 NM_001322880 137868 Hs.545526 NM_139167 ENSG00000185053 SGCZ ZSG1 sarcoglycan zeta protein-coding chr11-6911 chr11 107750858 107751068 + 6.83 0.000 Intergenic L1PA15|LINE|L1 -38907 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr11-5925 chr11 14707889 14708099 + 6.83 0.000 intron (NM_000922, intron 1 of 15) intron (NM_000922, intron 1 of 15) 64190 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr2-10635 chr2 13843999 13844209 + 6.83 0.000 Intergenic Intergenic 556854 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr18-2075 chr18 48401508 48401718 + 6.83 0.000 intron (NM_001371287, intron 1 of 5) intron (NM_001371287, intron 1 of 5) 7770 NM_001371285 chr5-8691 chr5 141824488 141824698 + 6.83 0.000 Intergenic MIRb|SINE|MIR 41609 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr20-3099 chr20 25384343 25384553 + 6.83 0.000 intron (NM_001042472, intron 1 of 12) intron (NM_001042472, intron 1 of 12) 6387 NM_001042472 26090 Hs.441550 NM_015600 ENSG00000100997 ABHD12 ABHD12A|BEM46L2|C20orf22|PHARC|dJ965G21.2|hABHD12 abhydrolase domain containing 12 protein-coding chr3-8177 chr3 38613849 38614059 + 6.83 0.000 intron (NM_198056, intron 5 of 27) intron (NM_198056, intron 5 of 27) 35718 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr3-11208 chr3 194193372 194193582 + 6.83 0.000 Intergenic Intergenic 12830 NR_125404 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chrX-3375 chrX 150363743 150363953 + 6.83 0.000 intron (NM_001177465, intron 1 of 4) CpG-30120 531 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr1-15602 chr1 160954408 160954618 + 6.83 0.000 intron (NM_080878, intron 1 of 7) intron (NM_080878, intron 1 of 7) 296 NM_080878 142683 Hs.385631 NM_080878 ENSG00000158764 ITLN2 HL-2|HL2 intelectin 2 protein-coding chr13-2839 chr13 108545168 108545378 + 6.83 0.000 Intergenic L1PA15|LINE|L1 -50632 NM_015011 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr19-4727 chr19 19416988 19417198 + 6.83 0.000 intron (NM_001359631, intron 1 of 10) intron (NM_001359631, intron 1 of 10) -17970 NR_030370 693225 NR_030370 ENSG00000207821 MIR640 MIRN640|hsa-mir-640 microRNA 640 ncRNA chr7-1598 chr7 150996076 150996286 + 6.83 0.000 intron (NM_001160110, intron 2 of 13) intron (NM_001160110, intron 2 of 13) 2377 NM_001160111 4846 Hs.647092 NM_000603 ENSG00000164867 NOS3 ECNOS|eNOS nitric oxide synthase 3 protein-coding chr6-3175 chr6 125956777 125956987 + 6.83 0.000 5' UTR (NM_138571, exon 1 of 5) 5' UTR (NM_138571, exon 1 of 5) 112 NM_138571 135114 Hs.72325 NM_138571 ENSG00000111911 HINT3 HINT4 histidine triad nucleotide binding protein 3 protein-coding chr13-3618 chr13 30026101 30026311 + 6.83 0.000 Intergenic Intergenic 82669 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr6-6883 chr6 11672873 11673083 + 6.83 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 106069 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr11-9389 chr11 56885207 56885417 + 6.83 0.000 Intergenic Intergenic 36834 NR_110137 101927120 Hs.472675 NR_110136 ENSG00000255433 LINC02735 - long intergenic non-protein coding RNA 2735 ncRNA chr2-9288 chr2 221881180 221881390 + 6.83 0.000 Intergenic Intergenic -307083 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr4-6035 chr4 2320899 2321109 + 6.83 0.000 intron (NM_001172656, intron 5 of 11) intron (NM_001172656, intron 5 of 11) 43810 NM_001172660 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr5-6558 chr5 15383674 15383884 + 6.83 0.000 Intergenic Intergenic -116401 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr7-8450 chr7 47871991 47872201 + 6.83 0.000 intron (NM_138295, intron 24 of 56) L1MB8|LINE|L1 76395 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr16-5308 chr16 70331586 70331796 + 6.83 0.000 intron (NM_007242, intron 9 of 11) intron (NM_007242, intron 9 of 11) 15056 NR_039997 100506083 Hs.635008 NR_039997 ENSG00000261777 LOC100506083 - uncharacterized LOC100506083 ncRNA chr4-7771 chr4 94889601 94889811 + 6.83 0.000 intron (NM_001203, intron 2 of 12) intron (NM_001203, intron 2 of 12) -106526 NM_001256792 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr1-4877 chr1 33351923 33352133 + 6.83 0.000 intron (NR_125978, intron 1 of 2) intron (NR_125978, intron 1 of 2) 1676 NR_125978 101929464 Hs.568627 NR_125978 ENSG00000233246 LOC101929464 - uncharacterized LOC101929464 ncRNA chr3-8332 chr3 69354812 69355022 + 6.83 0.000 intron (NM_015123, intron 1 of 22) Kanga2_a|DNA|TcMar-Tc2 31171 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr6-7784 chr6 97429463 97429673 + 6.83 0.000 intron (NR_110757, intron 1 of 4) L1MD1|LINE|L1 123982 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr9-7423 chr9 22434301 22434511 + 6.83 0.000 Intergenic LTR12D|LTR|ERV1 -12418 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr19-3873 chr19 30944995 30945205 + 6.83 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -222410 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr2-14608 chr2 233674093 233674303 + 6.83 0.000 intron (NM_021027, intron 1 of 4) intron (NM_021027, intron 1 of 4) 2300 NM_021027 54600 Hs.554822 NM_021027 ENSG00000241119 UGT1A9 HLUGP4|LUGP4|UDPGT|UDPGT 1-9|UGT-1I|UGT1-09|UGT1-9|UGT1.9|UGT1A9S|UGT1AI|UGT1I UDP glucuronosyltransferase family 1 member A9 protein-coding chr22-2128 chr22 37061041 37061251 + 6.83 0.000 exon (NM_001282684, exon 7 of 9) exon (NM_001282684, exon 7 of 9) 9410 NM_001282684 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr8-3435 chr8 81193822 81194032 + 6.83 0.000 Intergenic Intergenic -81859 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr12-4554 chr12 27614460 27614670 + 6.83 0.000 intron (NM_001198915, intron 2 of 26) intron (NM_001198915, intron 2 of 26) -81882 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr7-4979 chr7 151816254 151816464 + 6.83 0.000 intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -1488 NM_001040633 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr20-3415 chr20 43115508 43115718 + 6.83 0.000 intron (NM_133170, intron 1 of 31) MER20|DNA|hAT-Charlie 74293 NM_133170 11122 Hs.526879 NM_007050 ENSG00000196090 PTPRT RPTPrho protein tyrosine phosphatase receptor type T protein-coding chr21-1798 chr21 38627876 38628086 + 6.83 0.000 intron (NM_001243432, intron 1 of 11) AluJb|SINE|Alu 32686 NM_001243428 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr9-5185 chr9 70576941 70577151 + 6.83 0.000 intron (NM_001366143, intron 21 of 25) L2a|LINE|L2 -162389 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr13-1979 chr13 20333809 20334019 + 6.83 0.000 Intergenic LTR32|LTR|ERVL 99932 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr7-7709 chr7 313537 313747 + 6.83 0.000 Intergenic L1ME2z|LINE|L1 -65783 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr10-7472 chr10 9666120 9666330 + 6.83 0.000 Intergenic L1MC2|LINE|L1 -370632 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 - uncharacterized LOC101928272 ncRNA chr6-6915 chr6 14088874 14089084 + 6.83 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -28277 NM_001251901 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr4-7150 chr4 38553842 38554052 + 6.83 0.000 Intergenic HAL1ME|LINE|L1 -10056 NR_146991 105374411 NR_146991 LINC02278 - long intergenic non-protein coding RNA 2278 ncRNA chr2-8526 chr2 130374967 130375177 + 6.83 0.000 3' UTR (NM_001142370, exon 11 of 11) 3' UTR (NM_001142370, exon 11 of 11) 19016 NM_014369 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr11-9036 chr11 26739660 26739870 + 6.83 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -17705 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr12-2900 chr12 49883256 49883466 + 6.83 0.000 intron (NM_012306, intron 11 of 11) L2a|LINE|L2 20539 NM_012306 23017 Hs.567424 NM_012306 ENSG00000135472 FAIM2 LFG|LFG2|NGP35|NMP35|TMBIM2 Fas apoptotic inhibitory molecule 2 protein-coding chr17-4872 chr17 66008457 66008667 + 6.83 0.000 intron (NM_001353129, intron 16 of 26) AluJr4|SINE|Alu -182019 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr16-6286 chr16 31568665 31568875 + 6.83 0.000 non-coding (NR_027011, exon 1 of 1) non-coding (NR_027011, exon 1 of 1) 754 NR_027011 440359 Hs.650902 NR_027011 YBX3P1 CSDAP1 Y-box binding protein 3 pseudogene 1 pseudo chr15-1659 chr15 100875517 100875727 + 6.83 0.000 non-coding (NR_160703, exon 4 of 4) non-coding (NR_160703, exon 4 of 4) -4209 NM_001293815 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr6-4802 chr6 78895028 78895238 + 6.83 0.000 intron (NM_001010844, intron 2 of 3) L1MEc|LINE|L1 27582 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chr1-11812 chr1 28035158 28035368 + 6.83 0.000 intron (NM_001282562, intron 5 of 16) intron (NM_001282562, intron 5 of 16) 53347 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr15-4926 chr15 77814462 77814672 + 6.83 0.000 intron (NM_001301186, intron 1 of 5) MIRb|SINE|MIR 4885 NM_001301194 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr10-4757 chr10 3375731 3375941 + 6.83 0.000 intron (NR_131187, intron 1 of 1) (TC)n|Simple_repeat|Simple_repeat 57141 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr1-16358 chr1 220128492 220128702 + 6.83 0.000 intron (NM_018060, intron 14 of 22) intron (NM_018060, intron 14 of 22) -10356 NR_029711 406969 NR_029711 ENSG00000207624 MIR194-1 MIRN194-1|mir-194-1 microRNA 194-1 ncRNA chr18-2250 chr18 70557282 70557492 + 6.83 0.000 Intergenic Intergenic 93567 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr7-6999 chr7 119841171 119841381 + 6.83 0.000 intron (NR_131960, intron 1 of 4) MSTB-int|LTR|ERVL-MaLR 66099 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr1-16304 chr1 215870847 215871057 + 6.83 0.000 intron (NM_206933, intron 43 of 71) intron (NM_206933, intron 43 of 71) -201513 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr5-5369 chr5 133324305 133324515 + 6.83 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 103296 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr18-2362 chr18 49488234 49488444 + 6.83 0.000 TTS (NM_001199345) TTS (NM_001199345) 966 NR_031720 100302257 NR_031720 ENSG00000284239 MIR1539 MIRN1539|hsa-mir-1539 microRNA 1539 ncRNA chr8-6073 chr8 26274883 26275093 + 6.83 0.000 Intergenic MIR|SINE|MIR -16520 NM_002717 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr15-2367 chr15 41430165 41430375 + 6.83 0.000 intron (NM_015138, intron 1 of 17) AluSc8|SINE|Alu 13166 NM_015138 23168 Hs.511096 NM_015138 ENSG00000137815 RTF1 GTL7|KIAA0252 RTF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr19-6773 chr19 40744350 40744560 + 6.83 0.000 intron (NM_001353807, intron 4 of 6) intron (NM_001353807, intron 4 of 6) 6022 NM_001353806 284325 Hs.585105 NM_198476 ENSG00000188493 C19orf54 - chromosome 19 open reading frame 54 protein-coding chr7-9437 chr7 134191210 134191420 + 6.83 0.000 intron (NM_001365700, intron 11 of 15) intron (NM_001365700, intron 11 of 15) 63975 NM_001365701 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr17-5233 chr17 17470180 17470390 + 6.83 0.000 Intergenic MIR3|SINE|MIR -6715 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr21-1893 chr21 44067379 44067589 + 6.83 0.000 intron (NM_003274, intron 7 of 22) intron (NM_003274, intron 7 of 22) -6840 NM_001351709 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr14-2835 chr14 26469633 26469843 + 6.83 0.000 TTS (NM_006491) TTS (NM_006491) 83692 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr11-7797 chr11 98396988 98397198 + 6.83 0.000 Intergenic Harlequin-int|LTR|ERV1 -623856 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr7-6889 chr7 69161743 69161953 + 6.83 0.000 Intergenic Intergenic 435776 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr4-7496 chr4 73590030 73590240 + 6.83 0.000 intron (NM_001270391, intron 4 of 9) intron (NM_001270391, intron 4 of 9) 30301 NM_001270391 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr3-7045 chr3 173437648 173437858 + 6.83 0.000 intron (NM_014932, intron 2 of 6) intron (NM_014932, intron 2 of 6) 40009 NM_001365935 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr12-5614 chr12 53303425 53303635 + 6.83 0.000 intron (NM_021640, intron 3 of 6) Charlie17a|DNA|hAT-Charlie 3835 NM_021640 60314 Hs.655988 NM_021640 ENSG00000139637 C12orf10 Gamm1|MST024|MSTP024|MYG|MYG1 chromosome 12 open reading frame 10 protein-coding chr7-8058 chr7 22721205 22721415 + 6.83 0.000 Intergenic Intergenic -5890 NM_001318095 3569 Hs.654458 NM_000600 ENSG00000136244 IL6 BSF-2|BSF2|CDF|HGF|HSF|IFN-beta-2|IFNB2|IL-6 interleukin 6 protein-coding chr2-6533 chr2 204707150 204707360 + 6.83 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 161780 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr11-10734 chr11 132337501 132337711 + 6.83 0.000 TTS (NM_001048209) TTS (NM_001048209) 53304 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr2-11176 chr2 150846803 150847013 + 6.83 0.000 Intergenic MER34C_|LTR|ERV1 218011 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr8-7318 chr8 133524670 133524880 + 6.83 0.000 intron (NM_003033, intron 2 of 8) MER52A|LTR|ERV1 47112 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr10-5694 chr10 100099280 100099490 + 6.83 0.000 Intergenic Intergenic -17516 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chr6-7540 chr6 69951838 69952048 + 6.83 0.000 intron (NM_001858, intron 9 of 50) intron (NM_001858, intron 9 of 50) 85387 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chrX-5363 chrX 149994523 149994733 + 6.83 0.000 intron (NR_027456, intron 9 of 11) intron (NR_027456, intron 9 of 11) 56080 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr3-8102 chr3 15744309 15744519 + 6.83 0.000 intron (NM_001349280, intron 3 of 26) AluSq2|SINE|Alu 12133 NM_001195099 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr2-8714 chr2 156602141 156602351 + 6.83 0.000 Intergenic Intergenic 165867 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr9-6645 chr9 133565599 133565809 + 6.83 0.000 intron (NM_001145320, intron 12 of 18) intron (NM_001145320, intron 12 of 18) 14542 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr12-5984 chr12 94712962 94713172 + 6.83 0.000 Intergenic Intergenic -62510 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr2-8432 chr2 119671026 119671236 + 6.83 0.000 Intergenic MLT2B4|LTR|ERVL -8036 NM_001105198 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr2-10400 chr2 185494135 185494345 + 6.83 0.000 Intergenic L1PA15-16|LINE|L1 244479 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chrX-3314 chrX 118879173 118879383 + 6.83 0.000 intron (NR_110393, intron 6 of 6) CpG 39722 NR_110393 101928287 Hs.496647 NR_110393 ENSG00000203650 LINC01285 - long intergenic non-protein coding RNA 1285 ncRNA chr13-4265 chr13 97637857 97638067 + 6.83 0.000 Intergenic Intergenic 203793 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr3-9293 chr3 42673140 42673350 + 6.83 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -12292 NM_152393 131377 Hs.350288 NM_152393 ENSG00000157119 KLHL40 KBTBD5|NEM8|SRYP|SYRP kelch like family member 40 protein-coding chr3-8370 chr3 86641828 86642038 + 6.83 0.000 Intergenic Intergenic 159990 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr17-5275 chr17 20317684 20317894 + 6.83 0.000 3' UTR (NM_001033555, exon 13 of 13) 3' UTR (NM_001033555, exon 13 of 13) -3385 NR_023380 348254 Hs.462475 NR_023380 CCDC144CP CCDC144C coiled-coil domain containing 144C, pseudogene pseudo chr9-7231 chr9 1804291 1804501 + 6.83 0.000 Intergenic AluJb|SINE|Alu -210951 NM_001289397 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr8-7416 chr8 140199231 140199441 + 6.83 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -98801 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr22-2512 chr22 23214235 23214445 + 6.83 0.000 intron (NM_004327, intron 1 of 22) Charlie15a|DNA|hAT-Charlie 33831 NM_021574 613 Hs.517461 NM_004327 ENSG00000186716 BCR ALL|BCR1|CML|D22S11|D22S662|PHL BCR activator of RhoGEF and GTPase protein-coding chr6-4000 chr6 116564090 116564300 + 6.83 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 -7309 NM_001007464 51389 Hs.532164 NM_015952 ENSG00000111832 RWDD1 CGI-24|PTD013 RWD domain containing 1 protein-coding chr10-5209 chr10 61835076 61835286 + 6.83 0.000 Intergenic Intergenic -66518 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr5-7072 chr5 172586999 172587209 + 6.83 0.000 Intergenic Intergenic -28090 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr3-10947 chr3 175967752 175967962 + 6.83 0.000 Intergenic L1PA7|LINE|L1 -191524 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr6-8065 chr6 122683501 122683711 + 6.83 0.000 intron (NM_181795, intron 3 of 4) intron (NM_181795, intron 3 of 4) 30877 NM_001270395 5570 Hs.741340 NM_032471 ENSG00000135549 PKIB PRKACN2 cAMP-dependent protein kinase inhibitor beta protein-coding chr5-4974 chr5 79297509 79297719 + 6.83 0.000 intron (NM_152405, intron 4 of 10) intron (NM_152405, intron 4 of 10) 61483 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr3-5679 chr3 13271731 13271941 + 6.83 0.000 Intergenic L1M4|LINE|L1 148486 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr12-6300 chr12 51381784 51381994 + 6.83 0.000 intron (NM_007210, intron 2 of 11) intron (NM_007210, intron 2 of 11) -9428 NM_001258401 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr8-4704 chr8 140575399 140575609 + 6.83 0.000 intron (NM_001164623, intron 2 of 17) L1ME1|LINE|L1 60129 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr11-8030 chr11 16835952 16836162 + 6.83 0.000 intron (NM_001329630, intron 9 of 26) MLT1K|LTR|ERVL-MaLR 89965 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr18-1405 chr18 80203800 80204010 + 6.83 0.000 intron (NM_032510, intron 1 of 2) intron (NM_032510, intron 1 of 2) 43609 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr1-16590 chr1 236487001 236487211 + 6.83 0.000 Intergenic Intergenic -31108 NM_201545 3964 Hs.4082 NM_006499 ENSG00000116977 LGALS8 Gal-8|PCTA-1|PCTA1|Po66-CBP galectin 8 protein-coding chr11-4863 chr11 33899407 33899617 + 6.83 0.000 Intergenic MIRb|SINE|MIR -7436 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr17-7695 chr17 31534638 31534848 + 6.83 0.000 promoter-TSS (NR_039877) promoter-TSS (NR_039877) -140 NR_039877 100616248 NR_039877 ENSG00000284424 MIR4724 mir-4724 microRNA 4724 ncRNA chr7-9533 chr7 139994435 139994645 + 6.83 0.000 intron (NM_001366537, intron 8 of 11) intron (NM_001366537, intron 8 of 11) 69181 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr5-6320 chr5 129720713 129720923 + 6.83 0.000 intron (NM_133638, intron 21 of 22) intron (NM_133638, intron 21 of 22) -27276 NM_001257308 100127206 Hs.582534 NM_001257308 ENSG00000186367 MINAR2 KIAA1024L membrane integral NOTCH2 associated receptor 2 protein-coding chr5-2949 chr5 151749612 151749822 + 6.83 0.000 intron (NM_004045, intron 2 of 3) intron (NM_004045, intron 2 of 3) 8914 NM_004045 475 Hs.125213 NM_004045 ENSG00000177556 ATOX1 ATX1|HAH1 antioxidant 1 copper chaperone protein-coding chrX-2774 chrX 130684007 130684217 + 6.83 0.000 intron (NM_006375, intron 5 of 14) intron (NM_006375, intron 5 of 14) -118524 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr14-4697 chr14 57690680 57690890 + 6.83 0.000 intron (NM_001352014, intron 1 of 9) MER1A|DNA|hAT-Charlie 174214 NM_001352012 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr12-4835 chr12 57505062 57505272 + 6.83 0.000 intron (NM_004990, intron 11 of 20) AluSq2|SINE|Alu -7521 NR_106816 102465454 NR_106816 ENSG00000284152 MIR6758 hsa-mir-6758 microRNA 6758 ncRNA chr1-15580 chr1 160066003 160066213 + 6.83 0.000 intron (NM_002241, intron 1 of 1) intron (NM_002241, intron 1 of 1) 4052 NM_002241 3766 Hs.408960 NM_002241 ENSG00000177807 KCNJ10 BIRK-10|KCNJ13-PEN|KIR1.2|KIR4.1|SESAME potassium voltage-gated channel subfamily J member 10 protein-coding chr1-15740 chr1 171715646 171715856 + 6.83 0.000 intron (NM_001185127, intron 4 of 7) AluJr|SINE|Alu 26314 NM_001185127 8674 Hs.6651 NM_003762 ENSG00000117533 VAMP4 VAMP-4|VAMP24 vesicle associated membrane protein 4 protein-coding chr3-8947 chr3 14605432 14605642 + 6.83 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -46209 NR_135523 51244 Hs.517820 NM_016474 ENSG00000154781 CCDC174 C3orf19|HSPC212|IHPM|IHPMR coiled-coil domain containing 174 protein-coding chr11-6896 chr11 105125172 105125382 + 6.83 0.000 Intergenic L1M2a|LINE|L1 14492 NM_021571 59082 Hs.56279 NM_021571 ENSG00000255501 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family member 18 protein-coding chr2-11292 chr2 188381875 188382085 + 6.83 0.000 intron (NR_045563, intron 2 of 12) intron (NR_045563, intron 2 of 12) 84488 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr12-4464 chr12 15233677 15233887 + 6.83 0.000 Intergenic Intergenic -12365 NM_001190726 85004 Hs.199487 NM_032918 ENSG00000134533 RERG - RAS like estrogen regulated growth inhibitor protein-coding chr7-5773 chr7 76220386 76220596 + 6.83 0.000 intron (NM_001110199, intron 1 of 14) intron (NM_001110199, intron 1 of 14) 18595 NM_001110199 222183 Hs.511025 NM_001039212 ENSG00000177679 SRRM3 - serine/arginine repetitive matrix 3 protein-coding chr6-5854 chr6 35829902 35830112 + 6.83 0.000 Intergenic Intergenic 24655 NM_182548 222662 Hs.367947 NM_182548 ENSG00000197753 LHFPL5 DFNB67|TMHS|dJ510O8.8 LHFPL tetraspan subfamily member 5 protein-coding chr4-7517 chr4 75025164 75025374 + 6.83 0.000 intron (NM_015393, intron 2 of 3) intron (NM_015393, intron 2 of 3) -54907 NR_121617 100507388 Hs.570765 NR_121617 ENSG00000249717 LOC100507388 - uncharacterized LOC100507388 ncRNA chr7-2987 chr7 16269095 16269305 + 6.83 0.000 non-coding (NR_038946, exon 5 of 5) non-coding (NR_038946, exon 5 of 5) 58714 NR_038947 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr8-3352 chr8 42271797 42272007 + 6.83 0.000 promoter-TSS (NR_125823) promoter-TSS (NR_125823) 600 NR_040009 3551 Hs.597664 NM_001556 ENSG00000104365 IKBKB IKK-beta|IKK2|IKKB|IMD15|IMD15A|IMD15B|NFKBIKB inhibitor of nuclear factor kappa B kinase subunit beta protein-coding chr5-5856 chr5 181130916 181131126 + 6.83 0.000 Intergenic L2c|LINE|L2 -5717 NM_001258283 26693 Hs.742585 NM_001258283 ENSG00000185372 OR2V1 OR2V1P|OST265 olfactory receptor family 2 subfamily V member 1 protein-coding chr7-7695 chr7 156664095 156664305 + 6.83 0.000 intron (NM_001308273, intron 7 of 8) AluSp|SINE|Alu 20399 NM_001308274 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr1-8225 chr1 27187842 27188052 + 6.83 0.000 Intergenic MER51B|LTR|ERV1 -32822 NR_046474 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr10-3479 chr10 64325591 64325801 + 6.83 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -499832 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr2-12189 chr2 41442940 41443150 + 6.83 0.000 Intergenic L1MA1|LINE|L1 -434510 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr4-5075 chr4 146015904 146016114 + 6.83 0.000 Intergenic LTR16A2|LTR|ERVL -77186 NM_001306215 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr4-6725 chr4 4326335 4326545 + 6.83 0.000 Intergenic Intergenic 36189 NR_138481 166793 Hs.419997 NM_145291 ENSG00000168826 ZBTB49 ZNF509 zinc finger and BTB domain containing 49 protein-coding chr16-6296 chr16 46501337 46501547 + 6.83 0.000 intron (NR_026556, intron 10 of 16) intron (NR_026556, intron 10 of 16) 67655 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr18-3337 chr18 57023458 57023668 + 6.83 0.000 intron (NM_015285, intron 27 of 27) intron (NM_015285, intron 27 of 27) 48556 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr19-5695 chr19 12700805 12701015 + 6.83 0.000 3' UTR (NM_001136195, exon 26 of 26) 3' UTR (NM_001136195, exon 26 of 26) 2761 NR_132756 106633804 NR_132756 SNORD135 ZL2 small nucleolar RNA, C/D box 135 snoRNA chr2-14243 chr2 211840068 211840278 + 6.83 0.000 intron (NM_001042599, intron 3 of 26) THE1B|LTR|ERVL-MaLR 586187 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr4-6988 chr4 22583146 22583356 + 6.83 0.000 Intergenic Intergenic -67185 NM_145290 166647 Hs.99195 NM_145290 ENSG00000152990 ADGRA3 GPR125|PGR21|TEM5L adhesion G protein-coupled receptor A3 protein-coding chr6-5517 chr6 166344043 166344253 + 6.83 0.000 intron (NR_040022, intron 1 of 1) MER41A|LTR|ERV1 1517 NR_040022 100289495 NR_040022 LOC100289495 - uncharacterized LOC100289495 ncRNA chr9-6133 chr9 32344959 32345169 + 6.83 0.000 Intergenic Intergenic -39539 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chrX-4777 chrX 97108395 97108605 + 6.83 0.000 intron (NM_007309, intron 20 of 26) intron (NM_007309, intron 20 of 26) 224592 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr9-4065 chr9 117997406 117997616 + 6.83 0.000 Intergenic AluSc|SINE|Alu 293108 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr6-7621 chr6 78374795 78375005 + 6.83 0.000 Intergenic L1MA2|LINE|L1 164409 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr1-10530 chr1 169654240 169654450 + 6.83 0.000 Intergenic Intergenic -24221 NM_003005 6403 Hs.73800 NM_003005 ENSG00000174175 SELP CD62|CD62P|GMP140|GRMP|LECAM3|PADGEM|PSEL selectin P protein-coding chr10-6484 chr10 44853261 44853471 + 6.83 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -57950 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr9-5517 chr9 106217192 106217402 + 6.83 0.000 Intergenic L1MA9|LINE|L1 -383631 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr5-7400 chr5 24916273 24916483 + 6.83 0.000 Intergenic Intergenic -75795 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA chr12-5910 chr12 64517603 64517813 + 6.83 0.000 Intergenic AluJb|SINE|Alu 65588 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr6-2942 chr6 32660447 32660657 + 6.83 0.000 non-coding (NR_133907, exon 2 of 2) non-coding (NR_133907, exon 2 of 2) 672 NR_133907 106480429 Hs.701274 NR_133907 ENSG00000223534 HLA-DQB1-AS1 - HLA-DQB1 antisense RNA 1 ncRNA chr6-6760 chr6 3238989 3239199 + 6.83 0.000 non-coding (NR_147505, exon 2 of 2) non-coding (NR_147505, exon 2 of 2) 7691 NR_147505 100422781 Hs.664539 NR_147505 LOC100422781 - uncharacterized LOC100422781 ncRNA chr1-15090 chr1 98706419 98706629 + 6.83 0.000 intron (NR_033716, intron 8 of 8) L2a|LINE|L2 44803 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr18-2365 chr18 57925634 57925844 + 6.83 0.000 Intergenic Intergenic -118487 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr3-9102 chr3 28714863 28715073 + 6.83 0.000 intron (NR_038840, intron 2 of 4) MER45A|DNA|hAT-Tip100 139690 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr10-8533 chr10 92940150 92940360 + 6.83 0.000 intron (NM_001319195, intron 12 of 21) intron (NM_001319195, intron 12 of 21) 91735 NM_019053 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr15-5230 chr15 96779929 96780139 + 6.83 0.000 intron (NR_102754, intron 1 of 2) intron (NR_102754, intron 1 of 2) 1620 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr6-8287 chr6 142800137 142800347 + 6.83 0.000 intron (NM_006734, intron 2 of 9) intron (NM_006734, intron 2 of 9) 144934 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr3-10774 chr3 157675926 157676136 + 6.83 0.000 Intergenic Intergenic 132687 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr21-1591 chr21 15965670 15965880 + 6.83 0.000 Intergenic L2a|LINE|L2 -104713 NR_136541 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr2-7486 chr2 17452266 17452476 + 6.83 0.000 Intergenic MER45C|DNA|hAT-Tip100 66069 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr7-8313 chr7 41219353 41219563 + 6.83 0.000 Intergenic Intergenic 117854 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr7-9559 chr7 141800942 141801152 + 6.83 0.000 Intergenic L1M4|LINE|L1 10830 NM_018980 54429 Hs.675370 NM_018980 ENSG00000127366 TAS2R5 T2R5 taste 2 receptor member 5 protein-coding chr3-2639 chr3 9821024 9821234 + 6.83 0.000 intron (NM_001198793, intron 8 of 11) MER103C|DNA|hAT-Charlie 10867 NR_037162 26140 Hs.726435 NM_015644 ENSG00000214021 TTLL3 HOTTL tubulin tyrosine ligase like 3 protein-coding chr5-6717 chr5 69043034 69043244 + 6.83 0.000 Intergenic Intergenic -13212 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr8-6391 chr8 55256407 55256617 + 6.83 0.000 intron (NM_052898, intron 1 of 2) L2a|LINE|L2 154484 NM_052898 114786 Hs.130197 NM_052898 ENSG00000206579 XKR4 XRG4 XK related 4 protein-coding chr9-2669 chr9 37837359 37837569 + 6.83 0.000 intron (NM_001286810, intron 2 of 6) AluSc5|SINE|Alu 36667 NM_024345 79269 Hs.118394 NM_024345 ENSG00000122741 DCAF10 WDR32 DDB1 and CUL4 associated factor 10 protein-coding chr22-3057 chr22 39089956 39090166 + 6.83 0.000 Intergenic Intergenic -7163 NM_001166004 164668 Hs.440515 NM_181773 ENSG00000100298 APOBEC3H A3H|ARP-10|ARP10 apolipoprotein B mRNA editing enzyme catalytic subunit 3H protein-coding chr15-2537 chr15 43296362 43296572 + 6.83 0.000 intron (NM_052955, intron 1 of 12) intron (NM_052955, intron 1 of 12) 5788 NM_052955 116179 Hs.164661 NM_052955 ENSG00000159495 TGM7 TGMZ transglutaminase 7 protein-coding chr15-3412 chr15 89744866 89745076 + 6.83 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 6338 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr15-5196 chr15 94135062 94135272 + 6.83 0.000 Intergenic Intergenic -27229 NR_120320 101927112 Hs.134687 NR_120320 ENSG00000259724 LINC01581 - long intergenic non-protein coding RNA 1581 ncRNA chr16-2022 chr16 9147495 9147705 + 6.83 0.000 Intergenic MER34A1|LTR|ERV1 55956 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr18-1666 chr18 64160619 64160829 + 6.83 0.000 intron (NR_033881, intron 2 of 9) THE1D|LTR|ERVL-MaLR -11698 NR_027245 221241 Hs.567778 NM_152728 ENSG00000179676 LINC00305 C18orf20|HsT1235|NCRNA00305 long intergenic non-protein coding RNA 305 ncRNA chr7-7949 chr7 11069002 11069212 + 6.83 0.000 intron (NR_033436, intron 15 of 16) MER76|LTR|ERVL 95235 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chrX-2316 chrX 55135615 55135825 + 6.83 0.000 Intergenic Intergenic 25382 NM_001166703 90736 Hs.415414 NM_138362 ENSG00000182518 FAM104B CXorf44 family with sequence similarity 104 member B protein-coding chr18-2052 chr18 47525010 47525220 + 6.83 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 144619 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr5-8875 chr5 154744549 154744759 + 6.83 0.000 intron (NM_001367717, intron 1 of 18) AluYa5|SINE|Alu -10723 NM_033551 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr1-14155 chr1 32433719 32433929 + 6.83 0.000 Intergenic HERVH-int|LTR|ERV1 -31248 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr1-12081 chr1 154121057 154121267 + 6.83 0.000 intron (NM_001159484, intron 10 of 37) ERVL-E-int|LTR|ERVL -16570 NR_049883 100847024 NR_049883 ENSG00000263987 MIR5698 - microRNA 5698 ncRNA chr17-7773 chr17 38887635 38887845 + 6.83 0.000 intron (NM_001271608, intron 2 of 5) MIR1_Amn|SINE|MIR 17682 NM_006148 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr11-9707 chr11 67865870 67866080 + 6.83 0.000 Intergenic L1PA4|LINE|L1 -60639 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr18-788 chr18 45880370 45880580 + 6.83 0.000 intron (NM_020964, intron 31 of 43) intron (NM_020964, intron 31 of 43) 54800 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr5-6930 chr5 138269333 138269543 + 6.83 0.000 intron (NM_001496, intron 1 of 7) AluSq2|SINE|Alu 5183 NM_001496 2676 Hs.58042 NM_001496 ENSG00000146013 GFRA3 GDNFR3 GDNF family receptor alpha 3 protein-coding chr4-8773 chr4 188549090 188549300 + 6.83 0.000 intron (NR_033869, intron 4 of 4) L2b|LINE|L2 93617 NR_033869 401164 Hs.435756 NR_033869 ENSG00000249378 LINC01060 - long intergenic non-protein coding RNA 1060 ncRNA chr11-10565 chr11 122137781 122137991 + 6.83 0.000 intron (NR_137184, intron 1 of 1) intron (NR_137184, intron 1 of 1) 8707 NR_029477 406882 NR_029477 ENSG00000198975 MIRLET7A2 LET7A2|MIRNLET7A2|let-7a-2 microRNA let-7a-2 ncRNA chr9-5051 chr9 32289420 32289630 + 6.83 0.000 Intergenic L1PB2|LINE|L1 -95078 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr10-6710 chr10 124678189 124678399 + 6.83 0.000 intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -25734 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr21-1651 chr21 25497761 25497971 + 6.83 0.000 Intergenic Intergenic -64279 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene ncRNA chr6-4372 chr6 21049335 21049545 + 6.83 0.000 intron (NM_017774, intron 11 of 15) intron (NM_017774, intron 11 of 15) 462452 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr14-3732 chr14 33243997 33244207 + 6.83 0.000 intron (NM_173159, intron 3 of 11) intron (NM_173159, intron 3 of 11) 305223 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr6-7258 chr6 42373201 42373411 + 6.83 0.000 intron (NM_001297573, intron 2 of 17) AluSp|SINE|Alu 78745 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr10-8335 chr10 79277063 79277273 + 6.83 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -70301 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr5-1589 chr5 1651837 1652047 + 6.83 0.000 Intergenic Intergenic -17937 NR_003713 728613 Hs.720393 NR_003713 LOC728613 - programmed cell death 6 pseudogene pseudo chr10-4282 chr10 7667216 7667426 + 6.83 0.000 promoter-TSS (NM_030569) promoter-TSS (NM_030569) -323 NM_001001851 80760 Hs.498586 NM_030569 ENSG00000123243 ITIH5 ITI-HC5|PP14776 inter-alpha-trypsin inhibitor heavy chain 5 protein-coding chr6-4411 chr6 27168074 27168284 + 6.83 0.000 Intergenic MER92-int|LTR|ERV1 20553 NR_036096 100422934 NR_036096 ENSG00000265565 MIR3143 mir-3143 microRNA 3143 ncRNA chr6-6401 chr6 82773601 82773811 + 6.83 0.000 Intergenic Intergenic 292135 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr14-3333 chr14 89139393 89139603 + 6.83 0.000 Intergenic Intergenic 277735 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr11-5403 chr11 67575299 67575509 + 6.83 0.000 Intergenic AluSx1|SINE|Alu -8191 NM_000852 2950 Hs.523836 NM_000852 ENSG00000084207 GSTP1 DFN7|FAEES3|GST3|GSTP|HEL-S-22|PI glutathione S-transferase pi 1 protein-coding chr16-5518 chr16 23147079 23147289 + 6.83 0.000 intron (NM_020718, intron 1 of 15) AluSp|SINE|Alu 2086 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr3-10182 chr3 118671314 118671524 + 6.83 0.000 intron (NR_135547, intron 1 of 3) MLT1E3|LTR|ERVL-MaLR 29651 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr1-8480 chr1 118346739 118346949 + 6.83 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -161616 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr3-7582 chr3 9134118 9134328 + 6.83 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -58270 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr1-16200 chr1 207832919 207833129 + 6.83 0.000 Intergenic Intergenic -10321 NR_135299 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chr5-5830 chr5 178108060 178108270 + 6.83 0.000 Intergenic Intergenic -5367 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr1-11199 chr1 242181549 242181759 + 6.83 0.000 intron (NM_001320272, intron 6 of 10) intron (NM_001320272, intron 6 of 10) -182556 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr3-6416 chr3 100147268 100147478 + 6.83 0.000 intron (NM_001167924, intron 2 of 9) AluJo|SINE|Alu 32443 NM_001167924 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr7-4226 chr7 603890 604100 + 6.83 0.000 intron (NR_110055, intron 1 of 1) intron (NR_110055, intron 1 of 1) 597 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr13-3727 chr13 40103220 40103430 + 6.83 0.000 Intergenic Intergenic -78484 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr11-4520 chr11 117494550 117494760 + 6.83 0.000 intron (NM_020693, intron 11 of 32) MLT1C|LTR|ERVL-MaLR 166801 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr4-5200 chr4 161524095 161524305 + 6.83 0.000 intron (NM_020116, intron 10 of 15) MER4B|LTR|ERV1 -498533 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr15-2873 chr15 41897035 41897245 + 6.83 0.000 non-coding (NR_135681, exon 3 of 4) non-coding (NR_135681, exon 3 of 4) -3087 NM_016642 51332 Hs.709819 NM_016642 ENSG00000137877 SPTBN5 BSPECV|HUBSPECV|HUSPECV spectrin beta, non-erythrocytic 5 protein-coding chr20-3923 chr20 32812127 32812337 + 6.83 0.000 Intergenic Intergenic -7722 NM_012325 22919 Hs.472437 NM_012325 ENSG00000101367 MAPRE1 EB1 microtubule associated protein RP/EB family member 1 protein-coding chrX-4369 chrX 49946348 49946558 + 6.83 0.000 intron (NM_001127899, intron 3 of 14) MLT1E1|LTR|ERVL-MaLR 23857 NM_001272102 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr2-7626 chr2 27017044 27017254 + 6.83 0.000 intron (NM_001303050, intron 1 of 6) intron (NM_001303050, intron 1 of 6) 2395 NM_001303050 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr13-2155 chr13 110233374 110233584 + 6.83 0.000 intron (NM_001845, intron 2 of 51) intron (NM_001845, intron 2 of 51) 73678 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr4-6258 chr4 73983994 73984204 + 6.83 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -1975 NM_001363352 5196 Hs.81564 NM_002619 ENSG00000163737 PF4 CXCL4|PF-4|SCYB4 platelet factor 4 protein-coding chr12-3561 chr12 8405372 8405582 + 6.83 0.000 Intergenic LTR12C|LTR|ERV1 -14725 NR_024420 389634 Hs.434403 NM_001012988 ENSG00000226091 LINC00937 - long intergenic non-protein coding RNA 937 ncRNA chr1-10483 chr1 164334350 164334560 + 6.83 0.000 Intergenic Intergenic -224905 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr3-9312 chr3 43955249 43955459 + 6.83 0.000 Intergenic Intergenic -158858 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr11-9041 chr11 27319502 27319712 + 6.83 0.000 Intergenic L2a|LINE|L2 43608 NM_030771 91057 Hs.143733 NM_030771 ENSG00000109881 CCDC34 L15|NY-REN-41|RAMA3 coiled-coil domain containing 34 protein-coding chr19-7082 chr19 55520155 55520365 + 6.83 0.000 Intergenic MIR|SINE|MIR 16873 NM_001370096 646643 Hs.532676 NM_001101401 ENSG00000187550 SBK2 SGK069 SH3 domain binding kinase family member 2 protein-coding chr1-12164 chr1 182430330 182430540 + 6.83 0.000 Intergenic AluJr|SINE|Alu -19711 NM_001366934 353299 Hs.121200 NM_032267 ENSG00000121446 RGSL1 RGSL|RGSL2 regulator of G protein signaling like 1 protein-coding chr11-5810 chr11 6694063 6694273 + 6.83 0.000 Intergenic LTR8|LTR|ERV1 -10828 NM_022061 63875 Hs.523456 NM_022061 ENSG00000158042 MRPL17 L17mt|LIP2|MRP-L17|MRP-L26|RPL17L|RPML26 mitochondrial ribosomal protein L17 protein-coding chr1-8757 chr1 825754 825964 + 6.83 0.000 TTS (NR_024321) TTS (NR_024321) 1663 NR_024321 79854 Hs.351445 NM_024796 ENSG00000225880 LINC00115 NCRNA00115 long intergenic non-protein coding RNA 115 ncRNA chr15-2885 chr15 42164822 42165032 + 6.83 0.000 intron (NM_015289, intron 18 of 24) intron (NM_015289, intron 18 of 24) -8291 NM_213600 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr5-7407 chr5 26048212 26048422 + 6.83 0.000 Intergenic L1PA17|LINE|L1 857364 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chrX-4920 chrX 109580647 109580857 + 6.83 0.000 Intergenic AluSx|SINE|Alu 43547 NM_001242618 55916 Hs.25010 NM_018698 ENSG00000101888 NXT2 P15-2 nuclear transport factor 2 like export factor 2 protein-coding chr10-9091 chr10 125791731 125791941 + 6.83 0.000 intron (NR_136676, intron 9 of 10) L1MB7|LINE|L1 -16015 NM_147191 118856 Hs.314141 NM_147191 ENSG00000154485 MMP21 HTX7|MMP-21 matrix metallopeptidase 21 protein-coding chr7-7942 chr7 10473641 10473851 + 6.83 0.000 intron (NR_147499, intron 2 of 2) intron (NR_147499, intron 2 of 2) -228930 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr20-2303 chr20 6183296 6183506 + 6.83 0.000 Intergenic Intergenic -59857 NM_017671 55612 Hs.472054 NM_017671 ENSG00000101311 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding chr7-6105 chr7 120483990 120484200 + 6.83 0.000 intron (NM_012281, intron 1 of 5) L2|LINE|L2 210920 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr18-2476 chr18 46670259 46670469 + 6.83 0.000 3' UTR (NM_001307986, exon 8 of 8) 3' UTR (NM_001307986, exon 8 of 8) -13331 NM_144612 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr10-6813 chr10 15901321 15901531 + 6.83 0.000 Intergenic MamTip3|DNA|hAT-Tip100 -40893 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chr9-4751 chr9 131465903 131466113 + 6.83 0.000 intron (NM_013318, intron 11 of 30) AluSz|SINE|Alu -19657 NR_003050 692093 NR_003050 ENSG00000231587 SNORD62B U62|U62B small nucleolar RNA, C/D box 62B snoRNA chr9-8635 chr9 129235418 129235628 + 6.83 0.000 Intergenic LTR16E1|LTR|ERVL -46893 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr10-5524 chr10 84838035 84838245 + 6.83 0.000 Intergenic Intergenic 360765 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr20-2774 chr20 52961924 52962134 + 6.83 0.000 Intergenic MER94B|DNA|hAT-Blackjack -10329 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr9-4561 chr9 88011405 88011615 + 6.83 0.000 Intergenic Intergenic -36730 NM_178432 23552 Hs.522274 NM_012119 ENSG00000156345 CDK20 CCRK|CDCH|P42|PNQALRE cyclin dependent kinase 20 protein-coding chr1-10019 chr1 86780981 86781191 + 6.83 0.000 Intergenic Intergenic 76510 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr19-6971 chr19 48376901 48377111 + 6.83 0.000 TTS (NM_012451) TTS (NM_012451) 12639 NM_012451 23546 Hs.408333 NM_012451 ENSG00000105467 SYNGR4 - synaptogyrin 4 protein-coding chr10-8263 chr10 75720815 75721025 + 6.83 0.000 intron (NR_132791, intron 1 of 2) intron (NR_132791, intron 1 of 2) 8465 NR_132791 105378367 Hs.464836 NR_132791 LOC105378367 - uncharacterized LOC105378367 ncRNA chr6-8420 chr6 151284017 151284227 + 6.83 0.000 intron (NM_005100, intron 2 of 4) L1ME3|LINE|L1 -41409 NM_144497 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr4-8414 chr4 152521299 152521509 + 6.83 0.000 intron (NM_001349798, intron 2 of 13) L2c|LINE|L2 13629 NM_033632 55294 Hs.561245 NM_018315 ENSG00000109670 FBXW7 AGO|CDC4|FBW6|FBW7|FBX30|FBXO30|FBXW6|SEL-10|SEL10|hAgo|hCdc4 F-box and WD repeat domain containing 7 protein-coding chr7-3787 chr7 87059515 87059725 + 6.83 0.000 promoter-TSS (NM_001142749) promoter-TSS (NM_001142749) 34 NM_001142749 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr2-6569 chr2 222471144 222471354 + 6.83 0.000 intron (NM_001320833, intron 2 of 5) intron (NM_001320833, intron 2 of 5) 46706 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr2-14029 chr2 192557363 192557573 + 6.83 0.000 Intergenic HAL1b|LINE|L1 -192377 NR_002769 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr11-4609 chr11 3939248 3939458 + 6.83 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 83291 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr12-3046 chr12 4315093 4315303 + 6.83 0.000 Intergenic AluSx1|SINE|Alu -6015 NM_020375 57103 Hs.504545 NM_020375 ENSG00000078237 TIGAR C12orf5|FR2BP TP53 induced glycolysis regulatory phosphatase protein-coding chr10-7371 chr10 2134859 2135069 + 6.83 0.000 Intergenic MLT2B3|LTR|ERVL -58875 NR_106720 102465944 NR_106720 ENSG00000278069 MIR6072 hsa-mir-6072 microRNA 6072 ncRNA chr19-5402 chr19 13545582 13545792 + 6.83 0.000 Intergenic L2b|LINE|L2 -39208 NM_023035 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr11-5227 chr11 17710744 17710954 + 6.83 0.000 Intergenic Intergenic -8722 NM_002478 4654 Hs.181768 NM_002478 ENSG00000129152 MYOD1 MYF3|MYOD|PUM|bHLHc1 myogenic differentiation 1 protein-coding chr12-8078 chr12 117141863 117142073 + 6.83 0.000 TTS (NR_120464) TTS (NR_120464) 42501 NR_120464 101928244 Hs.742266 NR_120464 TESC-AS1 - TESC antisense RNA 1 (head to head) ncRNA chr1-8040 chr1 236962252 236962462 + 6.83 0.000 Intergenic Intergenic 42084 NM_001276687 645745 Hs.632513 NM_001039954 ENSG00000244020 MT1HL1 MT1P2 metallothionein 1H like 1 protein-coding chr17-7374 chr17 7653011 7653221 + 6.83 0.000 intron (NM_001678, intron 1 of 6) intron (NM_001678, intron 1 of 6) 2190 NM_001678 482 Hs.643540 NM_001678 ENSG00000129244 ATP1B2 AMOG ATPase Na+/K+ transporting subunit beta 2 protein-coding chr9-6868 chr9 81213446 81213656 + 6.83 0.000 Intergenic Intergenic 475984 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr1-7498 chr1 119189089 119189299 + 6.83 0.000 intron (NR_125975, intron 4 of 6) L1MEc|LINE|L1 -48522 NM_015836 10352 Hs.523506 NM_015836 ENSG00000116874 WARS2 NEMMLAS|TrpRS|mtTrpRS tryptophanyl tRNA synthetase 2, mitochondrial protein-coding chr10-8930 chr10 116406225 116406435 + 6.83 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -21517 NM_001011709 119548 Hs.276724 NM_001011709 ENSG00000203837 PNLIPRP3 - pancreatic lipase related protein 3 protein-coding chr10-2825 chr10 22245630 22245840 + 6.83 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -6337 NR_038921 100130992 Hs.48501 NR_038921 LOC100130992 - uncharacterized LOC100130992 ncRNA chr8-6679 chr8 80891387 80891597 + 6.83 0.000 Intergenic Intergenic -16711 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr11-10479 chr11 118033354 118033564 + 6.83 0.000 intron (NM_001354434, intron 2 of 5) L4_B_Mam|LINE|RTE-X -43553 NR_110734 56649 Hs.161985 NM_019894 ENSG00000137648 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane serine protease 4 protein-coding chrX-4024 chrX 17240789 17240999 + 6.83 0.000 Intergenic Intergenic -134306 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr1-14832 chr1 75610658 75610868 + 6.83 0.000 intron (NM_152697, intron 1 of 23) intron (NM_152697, intron 1 of 23) 351 NM_001320287 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr14-4013 chr14 42351876 42352086 + 6.83 0.000 Intergenic MLT2A2|LTR|ERVL 745125 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-10475 chr1 162684399 162684609 + 6.83 0.000 intron (NM_006182, intron 2 of 17) intron (NM_006182, intron 2 of 17) 52040 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr9-8387 chr9 118778468 118778678 + 6.83 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 98902 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr4-7229 chr4 43594793 43595003 + 6.83 0.000 Intergenic Intergenic -102355 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr4-6829 chr4 8150877 8151087 + 6.83 0.000 intron (NM_001130084, intron 1 of 19) MIRb|SINE|MIR 7831 NM_001130085 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr17-8219 chr17 64295057 64295267 + 6.83 0.000 Intergenic Intergenic -31902 NM_018469 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr3-3318 chr3 186057771 186057981 + 6.83 0.000 intron (NM_004454, intron 9 of 12) intron (NM_004454, intron 9 of 12) 51213 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr6-5166 chr6 127290065 127290275 + 6.83 0.000 exon (NM_001139510, exon 6 of 6) exon (NM_001139510, exon 6 of 6) 23332 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr5-7584 chr5 42100425 42100635 + 6.83 0.000 Intergenic L1PREC2|LINE|L1 74815 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA chr3-5646 chr3 11449747 11449957 + 6.83 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 118946 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr1-12077 chr1 152228084 152228294 + 6.83 0.000 Intergenic AluJr|SINE|Alu -3993 NM_001009931 388697 Hs.490162 NM_001009931 ENSG00000197915 HRNR FLG3|S100A16|S100a18 hornerin protein-coding chr17-6952 chr17 44041066 44041276 + 6.83 0.000 intron (NM_001369486, intron 1 of 3) AluSx|SINE|Alu -18020 NM_001304813 84336 Hs.514211 NM_032376 ENSG00000091947 TMEM101 - transmembrane protein 101 protein-coding chr9-7764 chr9 77145000 77145210 + 6.83 0.000 Intergenic L1MC1|LINE|L1 -32340 NM_001018038 23230 Hs.459790 NM_015186 ENSG00000197969 VPS13A CHAC|CHOREIN vacuolar protein sorting 13 homolog A protein-coding chr11-10427 chr11 115849051 115849261 + 6.83 0.000 Intergenic L1MEh|LINE|L1 -88956 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr2-5796 chr2 229434330 229434540 + 6.83 0.000 intron (NM_139072, intron 8 of 12) intron (NM_139072, intron 8 of 12) -163148 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr2-5378 chr2 98837010 98837220 + 6.83 0.000 intron (NM_207362, intron 3 of 9) intron (NM_207362, intron 3 of 9) -65217 NR_126337 101927070 Hs.469395 NR_126337 LINC02611 - long intergenic non-protein coding RNA 2611 ncRNA chr17-3970 chr17 64420299 64420509 + 6.83 0.000 Intergenic Intergenic -28711 NM_001085423 284021 Hs.631749 NM_001085423 ENSG00000271605 MILR1 Allergin-1|C17orf60|MCA-32|MCA32 mast cell immunoglobulin like receptor 1 protein-coding chr4-7325 chr4 55828146 55828356 + 6.83 0.000 intron (NM_001351574, intron 1 of 2) intron (NM_001351574, intron 1 of 2) 8248 NM_001351575 644145 Hs.570825 NM_001351574 ENSG00000250821 EXOC1L - exocyst complex component 1 like protein-coding chr12-5725 chr12 122742972 122743182 + 6.83 0.000 Intergenic Intergenic -9747 NM_003677 8562 Hs.22393 NM_003677 ENSG00000139726 DENR DRP|DRP1|SMAP-3 density regulated re-initiation and release factor protein-coding chr7-9028 chr7 101498970 101499180 + 6.83 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 69931 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr9-4193 chr9 34041401 34041611 + 6.83 0.000 intron (NM_001370059, intron 1 of 28) AluSx1|SINE|Alu 7381 NR_163243 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr2-12852 chr2 96465166 96465376 + 6.83 0.000 Intergenic L1PA8|LINE|L1 40086 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr15-3997 chr15 55423320 55423530 + 6.83 0.000 intron (NM_001033560, intron 8 of 8) AluJb|SINE|Alu -14915 NM_001204450 9236 Hs.285051 NM_004748 ENSG00000260916 CCPG1 CPR8 cell cycle progression 1 protein-coding chr18-2396 chr18 3006998 3007208 + 6.83 0.000 intron (NM_014646, intron 1 of 19) intron (NM_014646, intron 1 of 19) 4844 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr9-8157 chr9 104443800 104444010 + 6.83 0.000 Intergenic Intergenic -60358 NM_001004485 138805 Hs.553602 NM_001004485 ENSG00000186881 OR13F1 OR9-6 olfactory receptor family 13 subfamily F member 1 protein-coding chr20-3530 chr20 775225 775435 + 6.83 0.000 intron (NM_001370086, intron 1 of 5) AluJb|SINE|Alu 655 NM_001370086 113278 Hs.283865 NM_033409 ENSG00000101276 SLC52A3 BVVLS|BVVLS1|C20orf54|RFT2|RFVT3|bA371L19.1|hRFT2 solute carrier family 52 member 3 protein-coding chr1-11066 chr1 226132781 226132991 + 6.83 0.000 Intergenic Intergenic -15117 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr21-1173 chr21 42466987 42467197 + 6.83 0.000 Intergenic Intergenic 29132 NM_001286506 89765 Hs.661069 NM_080860 ENSG00000160188 RSPH1 CT79|RSP44|RSPH10A|TSA2|TSGA2 radial spoke head component 1 protein-coding chr1-16619 chr1 238779997 238780207 + 6.83 0.000 Intergenic L1MA4|LINE|L1 -294085 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr1-9393 chr1 31237065 31237275 + 6.83 0.000 intron (NM_024522, intron 1 of 6) AluJo|SINE|Alu 2717 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr5-1790 chr5 52989789 52989999 + 6.83 0.000 intron (NR_073107, intron 1 of 28) intron (NR_073107, intron 1 of 28) 542 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr6-6439 chr6 99282473 99282683 + 6.83 0.000 intron (NR_144463, intron 5 of 5) intron (NR_144463, intron 5 of 5) 67096 NM_032511 84553 Hs.573245 NM_032511 ENSG00000146267 FAXC C6orf168|dJ273F20 failed axon connections homolog, metaxin like GST domain containing protein-coding chr11-9420 chr11 59258116 59258326 + 6.83 0.000 Intergenic Intergenic -45294 NM_001039396 219972 Hs.744920 NM_001039396 ENSG00000197629 MPEG1 MPG1|MPS1|Mpg-1|P-2 macrophage expressed 1 protein-coding chr22-3249 chr22 43857226 43857436 + 6.83 0.000 intron (NM_014351, intron 1 of 6) FLAM_A|SINE|Alu 5182 NM_014351 25830 Hs.189810 NM_014351 ENSG00000130540 SULT4A1 BR-STL-1|BRSTL1|DJ388M5.3|NST|SULTX3|hBR-STL-1 sulfotransferase family 4A member 1 protein-coding chr3-2139 chr3 113709582 113709792 + 6.83 0.000 Intergenic AluJo|SINE|Alu -13041 NR_111981 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr6-7690 chr6 86069685 86069895 + 6.83 0.000 Intergenic L1M2a|LINE|L1 -391057 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr1-3334 chr1 26819105 26819315 + 6.83 0.000 Intergenic SVA_F|Retroposon|SVA -7478 NM_032283 84243 Hs.523710 NM_032283 ENSG00000204160 ZDHHC18 DHHC-18|DHHC18 zinc finger DHHC-type containing 18 protein-coding chr2-13163 chr2 119840580 119840790 + 6.83 0.000 intron (NM_002830, intron 2 of 26) L1PA11|LINE|L1 80763 NM_002830 5775 Hs.469809 NM_002830 ENSG00000088179 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase non-receptor type 4 protein-coding chr20-3194 chr20 49101987 49102197 + 6.83 0.000 Intergenic Intergenic 55780 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr9-7515 chr9 33052844 33053054 + 6.83 0.000 intron (NM_018225, intron 10 of 11) intron (NM_018225, intron 10 of 11) 23725 NM_018225 55234 Hs.655351 NM_018225 ENSG00000122692 SMU1 BWD|SMU-1|fSAP57 SMU1 DNA replication regulator and spliceosomal factor protein-coding chr7-3817 chr7 96666451 96666661 + 6.83 0.000 intron (NR_163952, intron 2 of 6) intron (NR_163952, intron 2 of 6) -2218 NR_038948 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr1-5306 chr1 219710942 219711152 + 6.83 0.000 Intergenic Intergenic -97902 NM_001355457 643136 Hs.647764 NM_001085394 ENSG00000215817 ZC3H11B ZC3HDC11B zinc finger CCCH-type containing 11B protein-coding chr8-2893 chr8 142541675 142541885 + 6.83 0.000 intron (NM_001702, intron 27 of 30) intron (NM_001702, intron 27 of 30) 72699 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr11-9348 chr11 46898970 46899180 + 6.83 0.000 intron (NM_002334, intron 5 of 37) intron (NM_002334, intron 5 of 37) 19475 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chr4-6442 chr4 136899882 136900092 + 6.83 0.000 intron (NR_149105, intron 3 of 3) MER4D1|LTR|ERV1 -293769 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr1-10158 chr1 109796339 109796549 + 6.83 0.000 Intergenic AluSz6|SINE|Alu -32521 NM_001319952 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr2-11452 chr2 227513346 227513556 + 6.83 0.000 intron (NM_004504, intron 2 of 12) LTR33|LTR|ERVL 41279 NM_004504 3267 Hs.352962 NM_004504 ENSG00000173744 AGFG1 HRB|RAB|RIP ArfGAP with FG repeats 1 protein-coding chr4-8197 chr4 134148870 134149080 + 6.83 0.000 Intergenic Intergenic 52814 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr4-6285 chr4 81946990 81947200 + 6.83 0.000 Intergenic LTR33|LTR|ERVL 426896 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr2-5089 chr2 11540117 11540327 + 6.83 0.000 TTS (NR_039627) TTS (NR_039627) 403 NM_148903 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr2-12037 chr2 29631822 29632032 + 6.83 0.000 intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -156550 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr11-7101 chr11 123046856 123047066 + 6.83 0.000 Intergenic Intergenic 11195 NR_003125 85391 NR_003125 ENSG00000200879 SNORD14E - small nucleolar RNA, C/D box 14E snoRNA chr19-5442 chr19 28537391 28537601 + 6.83 0.000 intron (NR_110759, intron 5 of 9) LTR40a|LTR|ERVL -69192 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr3-6252 chr3 68705185 68705395 + 6.83 0.000 Intergenic L1PA11|LINE|L1 204653 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr5-5735 chr5 169717616 169717826 + 6.83 0.000 intron (NR_156756, intron 21 of 52) intron (NR_156756, intron 21 of 52) 80446 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr1-10655 chr1 182934143 182934353 + 6.83 0.000 intron (NM_030933, intron 5 of 9) L1ME1|LINE|L1 18918 NM_001345928 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chrX-4492 chrX 64826491 64826701 + 6.83 0.000 Intergenic L1PA8|LINE|L1 149854 NR_045044 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr6-7520 chr6 66690788 66690998 + 6.83 0.000 Intergenic AluSq|SINE|Alu 903014 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr9-7791 chr9 79685038 79685248 + 6.83 0.000 intron (NR_104239, intron 9 of 20) intron (NR_104239, intron 9 of 20) 111966 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chrX-4727 chrX 91066578 91066788 + 6.83 0.000 Intergenic L1PA16|LINE|L1 -368156 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr3-9052 chr3 24057536 24057746 + 6.83 0.000 Intergenic L1PA3|LINE|L1 45606 NR_026834 152024 Hs.385606 NR_026834 ENSG00000224074 LINC00691 - long intergenic non-protein coding RNA 691 ncRNA chr9-3325 chr9 93223398 93223608 + 6.83 0.000 intron (NM_006648, intron 1 of 28) intron (NM_006648, intron 1 of 28) 38573 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr1-5476 chr1 111321102 111321312 + 6.83 0.000 TTS (NM_001040623) TTS (NM_001040623) -25353 NR_125338 128344 Hs.172510 NM_181643 ENSG00000173947 PIFO C1orf88|pitchfork primary cilia formation protein-coding chr8-6839 chr8 98322637 98322847 + 6.83 0.000 Intergenic Intergenic -28507 NM_001321636 79815 Hs.309489 NM_024759 ENSG00000104361 NIPAL2 NPAL2 NIPA like domain containing 2 protein-coding chr12-5756 chr12 483453 483663 + 6.83 0.000 intron (NM_173593, intron 1 of 19) AluJb|SINE|Alu 23619 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr4-3167 chr4 754989 755199 + 6.83 0.000 intron (NM_001317836, intron 9 of 11) intron (NM_001317836, intron 9 of 11) 26754 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr3-10198 chr3 120383068 120383278 + 6.83 0.000 Intergenic L2a|LINE|L2 12556 NR_029584 406975 NR_029584 ENSG00000284121 MIR198 MIRN198|miR-198 microRNA 198 ncRNA chr4-7227 chr4 43587864 43588074 + 6.83 0.000 Intergenic Intergenic -95426 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr3-6738 chr3 139127182 139127392 + 6.83 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 23102 NR_026783 60467 Hs.512673 NM_021812 ENSG00000232416 BPESC1 NCRNA00187 blepharophimosis, epicanthus inversus and ptosis candidate 1 ncRNA chr2-11090 chr2 126777567 126777777 + 6.83 0.000 Intergenic Intergenic -121218 NM_001322244 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr8-6083 chr8 26780576 26780786 + 6.83 0.000 intron (NM_001322504, intron 1 of 1) MER1A|DNA|hAT-Charlie 84974 NR_136343 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr9-6766 chr9 23576125 23576335 + 6.83 0.000 intron (NR_121602, intron 11 of 27) intron (NR_121602, intron 11 of 27) 96169 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr11-7151 chr11 127192553 127192763 + 6.83 0.000 Intergenic MER5A1|DNA|hAT-Charlie -78412 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr9-3754 chr9 123403999 123404209 + 6.83 0.000 intron (NM_024820, intron 19 of 20) intron (NM_024820, intron 19 of 20) -1501 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr7-6148 chr7 124712242 124712452 + 6.83 0.000 Intergenic L3b|LINE|CR1 53445 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr2-9004 chr2 195258178 195258388 + 6.83 0.000 Intergenic MER47B|DNA|TcMar-Tigger -398675 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr6-6789 chr6 4436450 4436660 + 6.83 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -52243 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr18-1931 chr18 34881543 34881753 + 6.83 0.000 intron (NM_032980, intron 11 of 13) intron (NM_032980, intron 11 of 13) 63267 NM_032980 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr18-3108 chr18 36184526 36184736 + 6.83 0.000 intron (NR_134605, intron 1 of 1) intron (NR_134605, intron 1 of 1) 2804 NR_134605 101927809 Hs.600673 NR_134605 ENSG00000260552 LOC101927809 - uncharacterized LOC101927809 ncRNA chr15-4357 chr15 41133416 41133626 + 6.83 0.000 Intergenic HERVH-int|LTR|ERV1 -17241 NM_017553 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr8-4712 chr8 140990101 140990311 + 6.83 0.000 intron (NM_001352737, intron 1 of 32) intron (NM_001352737, intron 1 of 32) 10798 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr8-6134 chr8 29513392 29513602 + 6.83 0.000 Intergenic Intergenic -162813 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr11-7106 chr11 123212143 123212353 + 6.83 0.000 Intergenic Intergenic -17000 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr12-7996 chr12 111732529 111732739 + 6.83 0.000 intron (NM_025247, intron 10 of 20) intron (NM_025247, intron 10 of 20) -34299 NM_000690 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr1-10414 chr1 157466471 157466681 + 6.83 0.000 Intergenic Intergenic 85939 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr3-8197 chr3 42522695 42522905 + 6.83 0.000 intron (NM_004624, intron 3 of 12) intron (NM_004624, intron 3 of 12) 9806 NR_046654 100874007 Hs.600642 NR_046654 VIPR1-AS1 - VIPR1 antisense RNA 1 ncRNA chr5-8588 chr5 138064468 138064678 + 6.83 0.000 Intergenic L1ME3B|LINE|L1 -19319 NM_058244 7478 Hs.591274 NM_031933 ENSG00000061492 WNT8A WNT8D Wnt family member 8A protein-coding chr21-1715 chr21 32236291 32236501 + 6.83 0.000 Intergenic AluY|SINE|Alu 42653 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr2-4646 chr2 186726997 186727207 + 6.83 0.000 intron (NM_177454, intron 1 of 7) intron (NM_177454, intron 1 of 7) 33042 NM_177454 165215 Hs.28872 NM_177454 ENSG00000144369 FAM171B KIAA1946 family with sequence similarity 171 member B protein-coding chr20-3816 chr20 23643524 23643734 + 6.83 0.000 Intergenic L1ME2z|LINE|L1 -5674 NM_001288614 1471 Hs.304682 NM_000099 ENSG00000101439 CST3 ARMD11|HEL-S-2 cystatin C protein-coding chr11-9069 chr11 29965462 29965672 + 6.83 0.000 Intergenic L2a|LINE|L2 16826 NR_132652 106456574 Hs.128812 NR_132652 ENSG00000261340 LINC01616 n341006 long intergenic non-protein coding RNA 1616 ncRNA chr6-7392 chr6 50711638 50711848 + 6.83 0.000 Intergenic Intergenic -1801 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr21-1120 chr21 36501757 36501967 + 6.83 0.000 intron (NM_001146077, intron 2 of 2) intron (NM_001146077, intron 2 of 2) -21740 NM_001146079 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr14-3414 chr14 96030365 96030575 + 6.83 0.000 Intergenic Intergenic -8854 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr5-8446 chr5 129459956 129460166 + 6.83 0.000 promoter-TSS (NM_133638) promoter-TSS (NM_133638) -237 NM_133638 171019 Hs.23751 NM_133638 ENSG00000145808 ADAMTS19 - ADAM metallopeptidase with thrombospondin type 1 motif 19 protein-coding chr10-5997 chr10 124955658 124955868 + 6.83 0.000 intron (NM_017580, intron 1 of 8) intron (NM_017580, intron 1 of 8) 13640 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr14-4083 chr14 64879094 64879304 + 6.83 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) 708 NM_001355437 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr5-6656 chr5 54631468 54631678 + 6.83 0.000 Intergenic L2b|LINE|L2 71751 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr9-8396 chr9 119331421 119331631 + 6.83 0.000 intron (NM_014618, intron 1 of 7) intron (NM_014618, intron 1 of 7) 37909 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr2-14167 chr2 205093765 205093975 + 6.83 0.000 intron (NM_205863, intron 4 of 21) MamRTE1|LINE|RTE-BovB 548395 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr5-5642 chr5 156584892 156585102 + 6.83 0.000 intron (NM_001128209, intron 3 of 7) intron (NM_001128209, intron 3 of 7) 257833 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr1-15989 chr1 196144731 196144941 + 6.83 0.000 Intergenic Intergenic -56121 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr10-7611 chr10 21441607 21441817 + 6.83 0.000 Intergenic AluJo|SINE|Alu 54929 NR_031736 100302129 NR_031736 ENSG00000222071 MIR1915 MIRN1915|hsa-mir-1915 microRNA 1915 ncRNA chr18-1352 chr18 5294345 5294555 + 6.83 0.000 intron (NM_001243704, intron 1 of 3) intron (NM_001243704, intron 1 of 3) 1276 NM_001243702 7541 Hs.592340 NM_003409 ENSG00000198081 ZBTB14 ZF5|ZFP-161|ZFP-5|ZFP161|ZNF478 zinc finger and BTB domain containing 14 protein-coding chr22-3612 chr22 20504018 20504228 + 6.83 0.000 Intergenic Intergenic -3487 NM_001293234 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr1-12813 chr1 85497230 85497440 + 6.83 0.000 intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) -32176 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr2-12134 chr2 37263851 37264061 + 6.83 0.000 intron (NM_005813, intron 13 of 17) intron (NM_005813, intron 13 of 17) 32298 NM_001350025 55471 Hs.433466 NM_018607 ENSG00000003509 NDUFAF7 C2orf56|MidA|PRO1853 NADH:ubiquinone oxidoreductase complex assembly factor 7 protein-coding chr11-10344 chr11 110404278 110404488 + 6.83 0.000 intron (NR_135100, intron 3 of 3) HERV9-int|LTR|ERV1 -25565 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chr6-4232 chr6 5736023 5736233 + 6.83 0.000 intron (NM_006567, intron 6 of 6) MLT1F|LTR|ERVL-MaLR -40856 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr5-9079 chr5 171783769 171783979 + 6.83 0.000 Intergenic L1MD2|LINE|L1 -1998 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr1-14846 chr1 76659727 76659937 + 6.83 0.000 Intergenic Intergenic 119435 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr6-3877 chr6 52937903 52938113 + 6.83 0.000 Intergenic Intergenic -28310 NM_001363542 2940 Hs.102484 NM_000847 ENSG00000174156 GSTA3 GSTA3-3|GTA3 glutathione S-transferase alpha 3 protein-coding chr3-8695 chr3 185874458 185874668 + 6.83 0.000 Intergenic LTR9D|LTR|ERV1 -49521 NM_001007225 10644 Hs.35354 NM_006548 ENSG00000073792 IGF2BP2 IMP-2|IMP2|VICKZ2 insulin like growth factor 2 mRNA binding protein 2 protein-coding chr19-6553 chr19 19121382 19121592 + 6.83 0.000 intron (NM_017814, intron 8 of 11) intron (NM_017814, intron 8 of 11) 16991 NM_017814 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr8-5399 chr8 27109893 27110103 + 6.72 0.000 Intergenic Intergenic -61035 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA chr1-16109 chr1 204286918 204287128 + 6.72 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 72906 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr1-8012 chr1 223353873 223354083 + 6.72 0.000 intron (NM_017982, intron 2 of 8) AluSq4|SINE|Alu 10198 NM_001037175 55061 Hs.497841 NM_017982 ENSG00000143502 SUSD4 PRO222 sushi domain containing 4 protein-coding chr19-3108 chr19 10954063 10954273 + 6.72 0.000 Intergenic Intergenic -6862 NM_001128847 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr18-1138 chr18 7237915 7238125 + 6.72 0.000 Intergenic Intergenic 6916 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr3-10640 chr3 147717029 147717239 + 6.72 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger 295807 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr7-7939 chr7 10219266 10219476 + 6.72 0.000 Intergenic Intergenic -483305 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr13-2732 chr13 95771752 95771962 + 6.72 0.000 intron (NM_006260, intron 9 of 11) L1ME2z|LINE|L1 94718 NM_006260 5611 Hs.59214 NM_006260 ENSG00000102580 DNAJC3 ACPHD|ERdj6|HP58|P58|P58IPK|PRKRI DnaJ heat shock protein family (Hsp40) member C3 protein-coding chr9-6124 chr9 19866422 19866632 + 6.72 0.000 Intergenic L1MA2|LINE|L1 -79508 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr3-2608 chr3 171284598 171284808 + 6.72 0.000 intron (NM_001161563, intron 2 of 31) intron (NM_001161563, intron 2 of 31) 175702 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr3-9289 chr3 42524861 42525071 + 6.72 0.000 intron (NM_004624, intron 3 of 12) MIRb|SINE|MIR 7640 NR_046654 100874007 Hs.600642 NR_046654 VIPR1-AS1 - VIPR1 antisense RNA 1 ncRNA chr11-6265 chr11 57969714 57969924 + 6.72 0.000 Intergenic L2|LINE|L2 -54062 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr17-6343 chr17 74882526 74882736 + 6.72 0.000 exon (NM_178128, exon 3 of 6) exon (NM_178128, exon 3 of 6) -9637 NM_001258014 2232 Hs.69745 NM_004110 ENSG00000161513 FDXR ADR|ADXR|ANOA ferredoxin reductase protein-coding chr1-14286 chr1 37989286 37989496 + 6.72 0.000 intron (NM_006802, intron 2 of 16) intron (NM_006802, intron 2 of 16) 631 NM_001320830 10946 Hs.77897 NM_006802 ENSG00000183431 SF3A3 PRP9|PRPF9|SAP61|SF3a60 splicing factor 3a subunit 3 protein-coding chr10-4025 chr10 12451060 12451270 + 6.72 0.000 intron (NM_001351032, intron 3 of 11) LTR79|LTR|ERVL 62183 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr3-10866 chr3 168881942 168882152 + 6.72 0.000 Intergenic Intergenic -19898 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr10-4773 chr10 4849681 4849891 + 6.72 0.000 Intergenic Intergenic 23579 NM_001040177 83592 Hs.657944 NM_031436 ENSG00000165568 AKR1E2 AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR aldo-keto reductase family 1 member E2 protein-coding chr5-5860 chr5 129657 129867 + 6.72 0.000 intron (NM_052909, intron 2 of 19) Tigger13a|DNA|TcMar-Tigger 37594 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr14-2174 chr14 95319765 95319975 + 6.72 0.000 promoter-TSS (NM_024734) promoter-TSS (NM_024734) 38 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr15-4609 chr15 60989728 60989938 + 6.72 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 239469 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr6-8282 chr6 142500333 142500543 + 6.72 0.000 Intergenic Intergenic 137398 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr17-7750 chr17 34511325 34511535 + 6.72 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 67939 NR_160787 400591 Hs.514090 NM_207454 C17orf102 - chromosome 17 open reading frame 102 ncRNA chr4-5843 chr4 108099983 108100193 + 6.72 0.000 intron (NM_001130713, intron 3 of 10) intron (NM_001130713, intron 3 of 10) 66709 NM_001166119 51176 Hs.743478 NM_016269 ENSG00000138795 LEF1 LEF-1|TCF10|TCF1ALPHA|TCF7L3 lymphoid enhancer binding factor 1 protein-coding chr1-8283 chr1 39676867 39677077 + 6.72 0.000 Intergenic L2c|LINE|L2 -4934 NM_032526 84618 Hs.307006 NM_032526 ENSG00000116981 NT5C1A CN-I|CN-IA|CN1|CN1A|CNI 5'-nucleotidase, cytosolic IA protein-coding chr8-7372 chr8 138098742 138098952 + 6.72 0.000 Intergenic AluSc8|SINE|Alu -15302 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chr8-5739 chr8 139142756 139142966 + 6.72 0.000 Intergenic Intergenic -228820 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr11-10175 chr11 94064657 94064867 + 6.72 0.000 intron (NM_001098672, intron 4 of 19) intron (NM_001098672, intron 4 of 19) 43408 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chr11-8560 chr11 134043314 134043524 + 6.72 0.000 Intergenic MER20|DNA|hAT-Charlie 11147 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LINC02731 - long intergenic non-protein coding RNA 2731 ncRNA chr9-7684 chr9 71025588 71025798 + 6.72 0.000 intron (NM_001366143, intron 1 of 25) MER4-int|LTR|ERV1 95928 NM_001366148 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr6-3220 chr6 139375217 139375427 + 6.72 0.000 promoter-TSS (NM_006079) promoter-TSS (NM_006079) -674 NM_006079 10370 Hs.82071 NM_006079 ENSG00000164442 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 protein-coding chr1-8691 chr1 222326232 222326442 + 6.72 0.000 Intergenic L2c|LINE|L2 221767 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr15-3481 chr15 95604806 95605016 + 6.72 0.000 Intergenic Intergenic 171818 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chrX-4804 chrX 100162677 100162887 + 6.72 0.000 Intergenic L1PA7|LINE|L1 247491 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr3-9677 chr3 63508242 63508452 + 6.72 0.000 intron (NM_001130003, intron 3 of 5) L2a|LINE|L2 41704 NR_046677 100874016 Hs.441275 NR_046677 ENSG00000241359 SYNPR-AS1 - SYNPR antisense RNA 1 ncRNA chr2-10940 chr2 78795645 78795855 + 6.72 0.000 Intergenic LTR1A1|LTR|ERV1 -229952 NM_198448 130120 Hs.447084 NM_198448 ENSG00000143954 REG3G LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429 regenerating family member 3 gamma protein-coding chr8-4731 chr8 142125952 142126162 + 6.72 0.000 Intergenic Intergenic -50282 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr12-2604 chr12 122174100 122174310 + 6.72 0.000 promoter-TSS (NM_001014336) promoter-TSS (NM_001014336) 16 NM_001014336 386653 Hs.569071 NM_001014336 ENSG00000204671 IL31 IL-31 interleukin 31 protein-coding chr3-4476 chr3 50617536 50617746 + 6.72 0.000 exon (NM_001243926, exon 4 of 13) exon (NM_001243926, exon 4 of 13) 490 NM_001243925 7867 Hs.234521 NM_004635 ENSG00000114738 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3 MAPK activated protein kinase 3 protein-coding chr1-14003 chr1 25971290 25971500 + 6.72 0.000 intron (NM_000437, intron 10 of 10) MLT1M|LTR|ERVL-MaLR 26668 NM_000437 5051 Hs.477083 NM_000437 ENSG00000158006 PAFAH2 HSD-PLA2 platelet activating factor acetylhydrolase 2 protein-coding chrX-2977 chrX 26001715 26001925 + 6.72 0.000 Intergenic L1PBb|LINE|L1 -136523 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr5-7236 chr5 9800279 9800489 + 6.72 0.000 intron (NR_027112, intron 4 of 12) intron (NR_027112, intron 4 of 12) -53993 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA chr14-2508 chr14 104063070 104063280 + 6.72 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -22525 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr5-8151 chr5 101506251 101506461 + 6.72 0.000 Intergenic LTR12C|LTR|ERV1 -603074 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr9-4647 chr9 114339267 114339477 + 6.72 0.000 intron (NM_001317950, intron 21 of 21) intron (NM_001317950, intron 21 of 21) 9583 NM_000608 5005 Hs.719954 NM_000608 ENSG00000228278 ORM2 AGP-B|AGP-B'|AGP2 orosomucoid 2 protein-coding chr20-3435 chr20 46264757 46264967 + 6.72 0.000 intron (NM_021248, intron 1 of 11) (CA)n|Simple_repeat|Simple_repeat 43636 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr2-14587 chr2 232343199 232343409 + 6.72 0.000 intron (NM_001257281, intron 13 of 13) intron (NM_001257281, intron 13 of 13) -35447 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr1-13714 chr1 15158908 15159118 + 6.72 0.000 intron (NR_135082, intron 1 of 2) intron (NR_135082, intron 1 of 2) 5266 NM_001136218 55092 Hs.465305 NM_018022 ENSG00000171729 TMEM51 C1orf72 transmembrane protein 51 protein-coding chr16-5373 chr16 87180980 87181190 + 6.72 0.000 Intergenic AluSq2|SINE|Alu -31030 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr13-3416 chr13 98584878 98585088 + 6.72 0.000 Intergenic MER45A|DNA|hAT-Tip100 7728 NR_046542 100874069 Hs.594160 NR_046542 STK24-AS1 - STK24 antisense RNA 1 ncRNA chrX-5080 chrX 125827456 125827666 + 6.72 0.000 Intergenic L1PA16|LINE|L1 -282201 NR_110409 101928495 Hs.545998 NR_110409 ENSG00000237208 LOC101928495 - uncharacterized LOC101928495 ncRNA chr12-1144 chr12 118289172 118289382 + 6.72 0.000 intron (NM_001346490, intron 1 of 21) AluSz|SINE|Alu 70428 NM_001346489 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr15-1760 chr15 63998203 63998413 + 6.72 0.000 intron (NM_014326, intron 2 of 11) intron (NM_014326, intron 2 of 11) 48177 NM_001363730 23604 Hs.237886 NM_014326 ENSG00000035664 DAPK2 DRP-1|DRP1 death associated protein kinase 2 protein-coding chr2-14506 chr2 227660988 227661198 + 6.72 0.000 Intergenic LTR33B|LTR|ERVL -27773 NM_020161 56918 Hs.283092 NM_020161 ENSG00000042304 C2orf83 - chromosome 2 open reading frame 83 protein-coding chr5-4805 chr5 58182093 58182303 + 6.72 0.000 Intergenic Intergenic -59857 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr11-6880 chr11 102615333 102615543 + 6.72 0.000 intron (NM_004771, intron 2 of 9) MER63B|DNA|hAT-Blackjack 9894 NM_004771 9313 Hs.591946 NM_004771 ENSG00000137674 MMP20 AI2A2|MMP-20 matrix metallopeptidase 20 protein-coding chr15-3418 chr15 89860712 89860922 + 6.72 0.000 intron (NR_023361, intron 5 of 6) intron (NR_023361, intron 5 of 6) -10096 NR_049817 100847059 NR_049817 ENSG00000264966 MIR5094 - microRNA 5094 ncRNA chr17-5660 chr17 50139961 50140171 + 6.72 0.000 intron (NM_032595, intron 5 of 9) intron (NM_032595, intron 5 of 9) -9906 NM_001257359 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr9-7589 chr9 36437387 36437597 + 6.72 0.000 Intergenic Intergenic -36294 NM_194330 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr13-3904 chr13 54317755 54317965 + 6.72 0.000 Intergenic LTR12D|LTR|ERV1 -5812 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chrX-1702 chrX 16778536 16778746 + 6.72 0.000 Intergenic Intergenic -7791 NM_001168683 55787 Hs.555961 NM_018360 ENSG00000086712 TXLNG CXorf15|ELRG|FIAT|LSR5|TXLNGX taxilin gamma protein-coding chr17-4915 chr17 75277523 75277733 + 6.72 0.000 intron (NM_001126121, intron 6 of 7) intron (NM_001126121, intron 6 of 7) 6329 NR_036520 100287042 Hs.514470 NR_036520 ENSG00000263843 LOC100287042 - uncharacterized LOC100287042 ncRNA chr7-4828 chr7 101175706 101175916 + 6.72 0.000 intron (NM_198571, intron 1 of 3) AluJr|SINE|Alu 3425 NM_001369695 375607 Hs.213044 NM_198571 ENSG00000167011 NAT16 C7orf52 N-acetyltransferase 16 (putative) protein-coding chr9-3000 chr9 93290347 93290557 + 6.72 0.000 intron (NM_006648, intron 20 of 28) MER30|DNA|hAT-Charlie 55851 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr8-2962 chr8 60716083 60716293 + 6.72 0.000 intron (NM_017780, intron 1 of 37) L2a|LINE|L2 -25071 NM_001316690 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr12-3055 chr12 5712556 5712766 + 6.72 0.000 intron (NM_001278596, intron 15 of 25) MLT1D|LTR|ERVL-MaLR 218529 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr15-4427 chr15 45004560 45004770 + 6.72 0.000 Intergenic LTR8|LTR|ERV1 -18530 NR_034039 6652 Hs.878 NM_003104 ENSG00000140263 SORD HEL-S-95n|RDH|SDH|SORD1|XDH sorbitol dehydrogenase protein-coding chr4-4780 chr4 100937177 100937387 + 6.72 0.000 Intergenic Intergenic -262169 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr1-12567 chr1 30637831 30638041 + 6.72 0.000 Intergenic Intergenic -80836 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr11-9022 chr11 25848628 25848838 + 6.72 0.000 Intergenic L1M3c|LINE|L1 -340390 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr14-5116 chr14 89339658 89339868 + 6.72 0.000 intron (NM_001085471, intron 3 of 6) intron (NM_001085471, intron 3 of 6) 77470 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr2-6323 chr2 70993782 70993992 + 6.72 0.000 intron (NM_144582, intron 1 of 5) intron (NM_144582, intron 1 of 5) 986 NM_144582 113419 Hs.516087 NM_144582 ENSG00000144043 TEX261 TEG-261 testis expressed 261 protein-coding chrX-3309 chrX 116433298 116433508 + 6.72 0.000 Intergenic THE1D|LTR|ERVL-MaLR -3203 NM_007231 11254 Hs.522109 NM_007231 ENSG00000268104 SLC6A14 BMIQ11 solute carrier family 6 member 14 protein-coding chr6-4423 chr6 31455168 31455378 + 6.72 0.000 Intergenic SVA_D|Retroposon|SVA -7907 NR_040662 10866 Hs.691948 NR_040662 ENSG00000206337 HCP5 6S2650E|D6S2650E|P5-1 HLA complex P5 ncRNA chr18-3103 chr18 36057927 36058137 + 6.72 0.000 intron (NM_001303411, intron 1 of 7) L2a|LINE|L2 9527 NM_001303412 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr1-15164 chr1 107353133 107353343 + 6.72 0.000 intron (NM_001113226, intron 2 of 6) MSTA-int|LTR|ERVL-MaLR 205169 NM_001113228 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr11-5769 chr11 4071643 4071853 + 6.72 0.000 intron (NM_001277962, intron 6 of 12) MIRb|SINE|MIR -22937 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr16-4983 chr16 5862661 5862871 + 6.72 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -156258 NM_001142333 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr1-16027 chr1 200749999 200750209 + 6.72 0.000 intron (NM_001297707, intron 1 of 17) L2|LINE|L2 10532 NM_001297707 23271 Hs.23585 NM_203459 ENSG00000118200 CAMSAP2 CAMSAP1L1 calmodulin regulated spectrin associated protein family member 2 protein-coding chr18-1909 chr18 32933385 32933595 + 6.72 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -160467 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr11-9617 chr11 65967305 65967515 + 6.72 0.000 intron (NM_005146, intron 10 of 19) intron (NM_005146, intron 10 of 19) 5676 NM_005146 9092 Hs.502883 NM_005146 ENSG00000175467 SART1 Ara1|HAF|HOMS1|SART1259|SNRNP110|Snu66 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP protein-coding chr8-2298 chr8 127735100 127735310 + 6.72 0.000 promoter-TSS (NM_001354870) promoter-TSS (NM_001354870) -229 NM_001354870 4609 Hs.202453 NM_002467 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc MYC proto-oncogene, bHLH transcription factor protein-coding chr5-3076 chr5 36071847 36072057 + 6.72 0.000 Intergenic Intergenic -5070 NR_031764 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr2-13821 chr2 175614546 175614756 + 6.72 0.000 Intergenic L2c|LINE|L2 387616 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr7-8957 chr7 98564259 98564469 + 6.72 0.000 Intergenic Intergenic -52921 NM_002523 4885 Hs.3281 NM_002523 ENSG00000106236 NPTX2 NARP|NP-II|NP2 neuronal pentraxin 2 protein-coding chr11-5121 chr11 126342038 126342248 + 6.72 0.000 non-coding (NR_033839, exon 2 of 2) non-coding (NR_033839, exon 2 of 2) 13444 NR_033839 399972 Hs.585206 NR_033839 GSEC DCPS-AS1|ST3GAL4-AS1 G-quadruplex forming sequence containing lncRNA ncRNA chr9-6859 chr9 77883428 77883638 + 6.72 0.000 intron (NM_002072, intron 2 of 6) L1PA17|LINE|L1 148278 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr2-11034 chr2 109559551 109559761 + 6.72 0.000 intron (NM_001321513, intron 8 of 9) intron (NM_001321513, intron 8 of 9) 54011 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr2-10031 chr2 27312301 27312511 + 6.72 0.000 intron (NM_002437, intron 5 of 7) intron (NM_002437, intron 5 of 7) -3961 NM_003353 7349 Hs.534363 NM_003353 ENSG00000163794 UCN UI|UROC urocortin protein-coding chrX-4186 chrX 34521967 34522177 + 6.72 0.000 Intergenic LTR55|LTR|ERVL? 135213 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr18-3489 chr18 72683043 72683253 + 6.72 0.000 Intergenic Intergenic -138806 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr2-12590 chr2 70763702 70763912 + 6.72 0.000 intron (NM_017482, intron 1 of 12) MIR|SINE|MIR 3908 NM_001185054 119 Hs.66187 NM_001617 ENSG00000075340 ADD2 ADDB adducin 2 protein-coding chrX-3729 chrX 119280615 119280825 + 6.72 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -10809 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr2-13298 chr2 129622381 129622591 + 6.72 0.000 Intergenic AluJr|SINE|Alu 255005 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr3-7896 chr3 131879479 131879689 + 6.72 0.000 intron (NM_130808, intron 2 of 15) intron (NM_130808, intron 2 of 15) 106347 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr6-7214 chr6 39981114 39981324 + 6.72 0.000 Intergenic Intergenic -46757 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr3-4889 chr3 179293722 179293932 + 6.72 0.000 Intergenic L1ME3B|LINE|L1 -26777 NM_171828 27094 Hs.591285 NM_014407 ENSG00000171121 KCNMB3 BKBETA3|HBETA3|K(VCA)BETA-3|KCNMB2|KCNMBL|SLO-BETA-3|SLOBETA3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 protein-coding chr7-7721 chr7 490218 490428 + 6.72 0.000 Intergenic AluJb|SINE|Alu 29521 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr2-13476 chr2 146985947 146986157 + 6.72 0.000 Intergenic Intergenic 398995 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr5-3864 chr5 135489204 135489414 + 6.72 0.000 Intergenic CpG -36958 NM_001099221 497189 Hs.552091 NM_001099221 ENSG00000255833 TIFAB - TIFA inhibitor protein-coding chr1-13391 chr1 1755470 1755680 + 6.72 0.000 intron (NM_001353641, intron 6 of 11) intron (NM_001353641, intron 6 of 11) 3067 NM_001198995 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr19-7089 chr19 56091617 56091827 + 6.72 0.000 intron (NM_001002836, intron 2 of 2) intron (NM_001002836, intron 2 of 2) 25038 NR_110741 101928886 Hs.434652 NR_110741 ENSG00000267522 LINC01864 - long intergenic non-protein coding RNA 1864 ncRNA chr19-4065 chr19 10269506 10269716 + 6.72 0.000 Intergenic CpG -1509 NM_000201 3383 Hs.643447 NM_000201 ENSG00000090339 ICAM1 BB2|CD54|P3.58 intercellular adhesion molecule 1 protein-coding chr5-8105 chr5 97409384 97409594 + 6.72 0.000 Intergenic L1MA5A|LINE|L1 -95207 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr14-4551 chr14 44469893 44470103 + 6.72 0.000 Intergenic Intergenic 37285 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr5-8564 chr5 136343111 136343321 + 6.72 0.000 intron (NM_020389, intron 2 of 11) L1M5|LINE|L1 22260 NM_001167577 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr3-10338 chr3 127417819 127418029 + 6.72 0.000 Intergenic Intergenic -27254 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr6-5171 chr6 128541072 128541282 + 6.72 0.000 Intergenic Intergenic -20578 NM_001291982 5796 Hs.155919 NM_002844 ENSG00000152894 PTPRK R-PTP-kappa protein tyrosine phosphatase receptor type K protein-coding chr5-3481 chr5 171640835 171641045 + 6.72 0.000 Intergenic Intergenic -144932 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr15-4436 chr15 45468095 45468305 + 6.72 0.000 Intergenic Intergenic 35150 NR_030599 100126311 NR_030599 ENSG00000284386 MIR147B MIRN147B|mir-147b microRNA 147b ncRNA chr19-5072 chr19 50951842 50952052 + 6.72 0.000 intron (NM_012427, intron 2 of 5) intron (NM_012427, intron 2 of 5) 1091 NM_001077492 25818 Hs.50915 NM_012427 ENSG00000167754 KLK5 KLK-L2|KLKL2|SCTE kallikrein related peptidase 5 protein-coding chr20-1902 chr20 61683674 61683884 + 6.72 0.000 intron (NM_001252339, intron 1 of 14) MIRb|SINE|MIR 35969 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr14-1316 chr14 61417856 61418066 + 6.72 0.000 intron (NM_006255, intron 2 of 13) intron (NM_006255, intron 2 of 13) 96518 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr15-4094 chr15 73746834 73747044 + 6.72 0.000 intron (NM_001039614, intron 1 of 1) intron (NM_001039614, intron 1 of 1) 4536 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr7-4450 chr7 129666366 129666576 + 6.72 0.000 intron (NM_001293164, intron 2 of 9) L1ME3Cz|LINE|L1 36393 NM_001040110 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr5-8125 chr5 98827270 98827480 + 6.72 0.000 Intergenic Intergenic 53712 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr22-3373 chr22 30512591 30512801 + 6.72 0.000 Intergenic AluSx1|SINE|Alu -7001 NM_001161368 284904 Hs.517541 NM_174977 ENSG00000133488 SEC14L4 TAP3 SEC14 like lipid binding 4 protein-coding chr7-8603 chr7 67020981 67021191 + 6.72 0.000 intron (NR_134540, intron 6 of 14) intron (NR_134540, intron 6 of 14) 24253 NM_018264 55253 Hs.520917 NM_018264 ENSG00000198874 TYW1 RSAFD1|TYW1A|YPL207W tRNA-yW synthesizing protein 1 homolog protein-coding chr2-11704 chr2 9693126 9693336 + 6.72 0.000 Intergenic LFSINE_Vert|SINE|tRNA -62234 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr12-8227 chr12 124116278 124116488 + 6.72 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 143168 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr15-3819 chr15 76419585 76419795 + 6.72 0.000 intron (NR_148227, intron 27 of 32) AluSp|SINE|Alu 82917 NM_145805 64843 Hs.444677 NM_145805 ENSG00000159556 ISL2 - ISL LIM homeobox 2 protein-coding chr6-2545 chr6 34486031 34486241 + 6.72 0.000 intron (NM_020804, intron 1 of 9) intron (NM_020804, intron 1 of 9) 20060 NM_020804 29993 Hs.520087 NM_020804 ENSG00000124507 PACSIN1 SDPI protein kinase C and casein kinase substrate in neurons 1 protein-coding chr15-1751 chr15 57111384 57111594 + 6.72 0.000 intron (NM_207038, intron 5 of 19) intron (NM_207038, intron 5 of 19) -107941 NM_001306220 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr12-6538 chr12 112570457 112570667 + 6.72 0.000 Intergenic Intergenic -4674 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr13-4277 chr13 98199712 98199922 + 6.72 0.000 intron (NM_005766, intron 1 of 26) intron (NM_005766, intron 1 of 26) -8707 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr13-2051 chr13 51072635 51072845 + 6.72 0.000 Intergenic Intergenic -6583 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr3-7586 chr3 10026267 10026477 + 6.72 0.000 promoter-TSS (NM_001319984) promoter-TSS (NM_001319984) -15 NM_001018115 2177 Hs.208388 NM_033084 ENSG00000144554 FANCD2 FA-D2|FA4|FACD|FAD|FAD2|FANCD FA complementation group D2 protein-coding chr2-12144 chr2 37940139 37940349 + 6.72 0.000 intron (NM_001170792, intron 2 of 10) L1PA7|LINE|L1 -10200 NM_001170793 151393 Hs.591566 NM_144713 ENSG00000115841 RMDN2 BLOCK18|FAM82A|FAM82A1|PRO34163|PYST9371|RMD-2|RMD2|RMD4 regulator of microtubule dynamics 2 protein-coding chr12-8262 chr12 124857028 124857238 + 6.72 0.000 intron (NR_160424, intron 1 of 11) intron (NR_160424, intron 1 of 11) 6731 NR_160420 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr1-8449 chr1 107359289 107359499 + 6.72 0.000 intron (NM_001113226, intron 2 of 6) intron (NM_001113226, intron 2 of 6) 211325 NM_001113228 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr1-16572 chr1 235009688 235009898 + 6.72 0.000 Intergenic L2b|LINE|L2 -45794 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr3-5489 chr3 191356822 191357032 + 6.72 0.000 intron (NM_178335, intron 1 of 11) intron (NM_178335, intron 1 of 11) -26391 NM_198152 257313 Hs.518492 NM_198152 ENSG00000188958 UTS2B U2B|URP|UTS2D urotensin 2B protein-coding chr22-1958 chr22 49812915 49813125 + 6.72 0.000 intron (NM_001304809, intron 2 of 12) intron (NM_001304809, intron 2 of 12) 11311 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr17-7627 chr17 28113233 28113443 + 6.72 0.000 intron (NM_016231, intron 1 of 10) MER41A|LTR|ERV1 70661 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr18-2012 chr18 42493278 42493488 + 6.72 0.000 intron (NR_046174, intron 6 of 9) MIR|SINE|MIR 306715 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr20-3676 chr20 12641881 12642091 + 6.72 0.000 Intergenic Intergenic 294977 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr20-2811 chr20 57586033 57586243 + 6.72 0.000 Intergenic L2a|LINE|L2 25028 NM_002591 5105 Hs.1872 NM_002591 ENSG00000124253 PCK1 PCKDC|PEPCK-C|PEPCK1|PEPCKC phosphoenolpyruvate carboxykinase 1 protein-coding chr18-1963 chr18 37542391 37542601 + 6.72 0.000 intron (NM_001353701, intron 1 of 1) MIRb|SINE|MIR 23302 NM_001353752 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr13-2820 chr13 103370100 103370310 + 6.72 0.000 Intergenic Intergenic -54995 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr13-3554 chr13 24670972 24671182 + 6.72 0.000 Intergenic Intergenic -9331 NM_001676 479 Hs.147111 NM_001676 ENSG00000075673 ATP12A ATP1AL1|HK ATPase H+/K+ transporting non-gastric alpha2 subunit protein-coding chr10-8252 chr10 75224335 75224545 + 6.72 0.000 intron (NM_001324090, intron 10 of 11) MER21-int|LTR|ERVL 11517 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr3-4756 chr3 99579229 99579439 + 6.72 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -59260 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr2-10945 chr2 81795872 81796082 + 6.72 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -329031 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr4-7337 chr4 56871397 56871607 + 6.72 0.000 Intergenic Intergenic -36398 NM_005612 5978 Hs.307836 NM_005612 ENSG00000084093 REST DFNA27|GINGF5|HGF5|NRSF|WT6|XBR RE1 silencing transcription factor protein-coding chr9-2287 chr9 130666561 130666771 + 6.72 0.000 exon (NM_021619, exon 2 of 5) exon (NM_021619, exon 2 of 5) 2072 NM_021619 59335 Hs.495311 NM_021619 ENSG00000130711 PRDM12 HSAN8|PFM9 PR/SET domain 12 protein-coding chr4-8411 chr4 152197707 152197917 + 6.72 0.000 Intergenic Intergenic 96994 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr4-5850 chr4 113485581 113485791 + 6.72 0.000 intron (NM_001221, intron 14 of 18) intron (NM_001221, intron 14 of 18) 192847 NM_001354279 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr2-6335 chr2 76864490 76864700 + 6.72 0.000 intron (NR_146416, intron 1 of 1) AluSp|SINE|Alu -121370 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr15-2988 chr15 52958125 52958335 + 6.72 0.000 Intergenic Intergenic -158135 NR_147181 105370822 Hs.527821 NR_147181 ENSG00000259237 LINC02490 - long intergenic non-protein coding RNA 2490 ncRNA chr18-3283 chr18 52715449 52715659 + 6.72 0.000 intron (NM_005215, intron 1 of 28) AluSx1|SINE|Alu 375357 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr17-6589 chr17 49932282 49932492 + 6.72 0.000 Intergenic Intergenic -36803 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr19-6875 chr19 44966533 44966743 + 6.72 0.000 intron (NM_001282175, intron 2 of 13) MIR|SINE|MIR 11258 NM_001294 1209 Hs.444441 NM_001294 ENSG00000104853 CLPTM1 - CLPTM1 regulator of GABA type A receptor forward trafficking protein-coding chr10-4661 chr10 126628922 126629132 + 6.72 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) 41483 NM_001350922 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr5-6102 chr5 17679752 17679962 + 6.72 0.000 Intergenic Charlie3|DNA|hAT-Charlie -24219 NM_001355258 391769 NM_001355258 ENSG00000269466 H3.Y - histone cluster 2, H3c pseudogene protein-coding chr19-3956 chr19 306239 306449 + 6.72 0.000 3' UTR (NM_017550, exon 14 of 14) 3' UTR (NM_017550, exon 14 of 14) -14941 NM_177526 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr10-7929 chr10 51799147 51799357 + 6.72 0.000 intron (NM_001098512, intron 3 of 17) intron (NM_001098512, intron 3 of 17) -99657 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr1-10929 chr1 210997482 210997692 + 6.72 0.000 intron (NM_002238, intron 6 of 10) L1P1|LINE|L1 135787 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA chrX-3244 chrX 73259531 73259741 + 6.72 0.000 Intergenic HERVI-int|LTR|ERV1 -44785 NM_021963 4674 Hs.66180 NM_021963 ENSG00000186462 NAP1L2 BPX nucleosome assembly protein 1 like 2 protein-coding chr11-4326 chr11 70457166 70457376 + 6.72 0.000 Intergenic Intergenic 58742 NM_005231 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr16-5470 chr16 3078053 3078263 + 6.72 0.000 Intergenic HERVK9-int|LTR|ERVK 12374 NM_001012636 9235 Hs.943 NM_004221 ENSG00000008517 IL32 IL-32alpha|IL-32beta|IL-32delta|IL-32gamma|NK4|TAIF|TAIFa|TAIFb|TAIFc|TAIFd interleukin 32 protein-coding chr10-8303 chr10 77956356 77956566 + 6.72 0.000 Intergenic AluSz|SINE|Alu 29649 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr2-12391 chr2 54371726 54371936 + 6.72 0.000 Intergenic MIRb|SINE|MIR 40947 NM_001369401 129852 Hs.732626 NM_173486 ENSG00000177994 C2orf73 - chromosome 2 open reading frame 73 protein-coding chr5-6968 chr5 143916047 143916257 + 6.72 0.000 Intergenic Plat_L3|LINE|CR1 103991 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr2-13740 chr2 168538359 168538569 + 6.72 0.000 intron (NM_001256126, intron 1 of 10) L2a|LINE|L2 -44479 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr12-5125 chr12 98424845 98425055 + 6.72 0.000 Intergenic Intergenic 32195 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr7-4712 chr7 47801040 47801250 + 6.72 0.000 intron (NM_138295, intron 53 of 56) intron (NM_138295, intron 53 of 56) 5854 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr16-4162 chr16 6389220 6389430 + 6.72 0.000 intron (NM_018723, intron 2 of 15) intron (NM_018723, intron 2 of 15) 369622 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr4-5513 chr4 90015727 90015937 + 6.72 0.000 Intergenic L2c|LINE|L2 -111701 NM_001145065 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr5-6950 chr5 140055831 140056041 + 6.72 0.000 Intergenic Intergenic -12637 NM_013981 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr14-4443 chr14 33296647 33296857 + 6.72 0.000 intron (NM_173159, intron 3 of 11) intron (NM_173159, intron 3 of 11) 357873 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr9-2338 chr9 38049558 38049768 + 6.72 0.000 intron (NM_003028, intron 1 of 5) MIRc|SINE|MIR 19564 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr9-5895 chr9 132370402 132370612 + 6.72 0.000 Intergenic Intergenic -15521 NM_015046 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr7-8470 chr7 48669486 48669696 + 6.72 0.000 Intergenic Intergenic -254956 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr1-6714 chr1 58060209 58060419 + 6.72 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 190189 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr8-7347 chr8 134945524 134945734 + 6.72 0.000 Intergenic L2a|LINE|L2 95694 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr8-6680 chr8 80941325 80941535 + 6.72 0.000 Intergenic L2a|LINE|L2 -66649 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr18-3390 chr18 60479647 60479857 + 6.72 0.000 Intergenic Intergenic -106977 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr1-13325 chr1 242447281 242447491 + 6.72 0.000 intron (NM_001320272, intron 2 of 10) intron (NM_001320272, intron 2 of 10) 2082 NM_001195812 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr7-6570 chr7 73400146 73400356 + 6.72 0.000 Intergenic Intergenic -33527 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr9-8574 chr9 127721601 127721811 + 6.72 0.000 intron (NM_144965, intron 6 of 13) AluSg4|SINE|Alu 5627 NM_144965 158248 Hs.642748 NM_144965 ENSG00000167094 TTC16 - tetratricopeptide repeat domain 16 protein-coding chr17-5708 chr17 55851182 55851392 + 6.72 0.000 Intergenic Charlie4z|DNA|hAT-Charlie 100182 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr2-11316 chr2 197706053 197706263 + 6.72 0.000 exon (NM_138395, exon 1 of 1) exon (NM_138395, exon 1 of 1) 789 NM_138395 92935 Hs.744330 NM_138395 ENSG00000247626 MARS2 COXPD25|MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding chr15-3337 chr15 80776358 80776568 + 6.72 0.000 Intergenic Intergenic -2907 NM_001293298 57214 Hs.459088 NM_018689 ENSG00000103888 CEMIP CCSP1|HYBID|KIAA1199|TMEM2L cell migration inducing hyaluronidase 1 protein-coding chr3-4421 chr3 10541521 10541731 + 6.72 0.000 intron (NM_001353564, intron 1 of 20) L1MD2|LINE|L1 -36040 NM_001683 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr7-7698 chr7 156963817 156964027 + 6.72 0.000 exon (NM_138400, exon 7 of 11) exon (NM_138400, exon 7 of 11) 14210 NM_001353366 64434 Hs.15825 NM_138400 ENSG00000146909 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding chr14-4753 chr14 62289617 62289827 + 6.72 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -149749 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr5-7203 chr5 7585045 7585255 + 6.72 0.000 intron (NM_020546, intron 3 of 24) Ricksha_0|DNA|MULE-MuDR 189012 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chr1-12756 chr1 68753739 68753949 + 6.72 0.000 Intergenic Intergenic -256762 NM_017779 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding chr8-5948 chr8 19982597 19982807 + 6.72 0.000 Intergenic MER31B|LTR|ERV1 43449 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr17-5875 chr17 68972187 68972397 + 6.72 0.000 Intergenic MER20|DNA|hAT-Charlie -16900 NM_001288985 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr1-4961 chr1 53552297 53552507 + 6.72 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 93003 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr10-7509 chr10 13167721 13167931 + 6.72 0.000 intron (NM_018518, intron 2 of 19) intron (NM_018518, intron 2 of 19) 6268 NM_182751 55388 Hs.198363 NM_018518 ENSG00000065328 MCM10 CNA43|DNA43|PRO2249 minichromosome maintenance 10 replication initiation factor protein-coding chr6-5647 chr6 76082655 76082865 + 6.72 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -10082 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr12-2547 chr12 106903553 106903763 + 6.72 0.000 Intergenic Intergenic -52064 NM_001319666 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr15-2008 chr15 45152424 45152634 + 6.72 0.000 intron (NM_175940, intron 25 of 33) intron (NM_175940, intron 25 of 33) 22535 NM_175940 53905 Hs.272813 NM_017434 ENSG00000137857 DUOX1 LNOX1|NOXEF1|THOX1 dual oxidase 1 protein-coding chr14-4150 chr14 75344191 75344401 + 6.72 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 49892 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr21-1138 chr21 39087322 39087532 + 6.72 0.000 Intergenic Intergenic 96024 NM_003720 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chr2-5060 chr2 6982000 6982210 + 6.72 0.000 intron (NM_001349186, intron 2 of 7) THE1D|LTR|ERVL-MaLR 49021 NM_001349182 9781 Hs.22146 NM_014746 ENSG00000151692 RNF144A RNF144|UBCE7IP4|hUIP4 ring finger protein 144A protein-coding chr12-7137 chr12 47886381 47886591 + 6.72 0.000 intron (NM_001364085, intron 1 of 9) intron (NM_001364085, intron 1 of 9) 18508 NM_000376 7421 Hs.524368 NM_000376 ENSG00000111424 VDR NR1I1|PPP1R163 vitamin D receptor protein-coding chr22-4014 chr22 39976113 39976323 + 6.72 0.000 Intergenic Intergenic -18736 NM_138435 113828 Hs.26192 NM_138435 ENSG00000133477 FAM83F - family with sequence similarity 83 member F protein-coding chr15-2421 chr15 69599613 69599823 + 6.72 0.000 intron (NR_126438, intron 1 of 3) intron (NR_126438, intron 1 of 3) 7518 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr17-7824 chr17 40726926 40727136 + 6.72 0.000 Intergenic MIRb|SINE|MIR -23279 NM_019016 192666 Hs.87383 NM_019016 ENSG00000167916 KRT24 K24|KA24 keratin 24 protein-coding chr7-3609 chr7 31956343 31956553 + 6.72 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 113959 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr3-5904 chr3 39707376 39707586 + 6.72 0.000 Intergenic Intergenic -101433 NM_001284423 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr17-5857 chr17 67751269 67751479 + 6.72 0.000 Intergenic LTR28C|LTR|ERV1 10704 NR_003706 100124536 Hs.693446 NR_003706 ENSG00000200394 SNORA38B - small nucleolar RNA, H/ACA box 38B snoRNA chr12-6202 chr12 23203840 23204050 + 6.72 0.000 Intergenic FLAM_A|SINE|Alu 28309 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr20-2190 chr20 50137139 50137349 + 6.72 0.000 intron (NM_199129, intron 2 of 5) AluJb|SINE|Alu 16479 NM_199129 387521 Hs.744839 NM_199129 ENSG00000240849 TMEM189 KUA transmembrane protein 189 protein-coding chr9-8415 chr9 120730902 120731112 + 6.72 0.000 Intergenic Intergenic -16537 NM_001080497 1955 Hs.744903 NM_001080497 ENSG00000106780 MEGF9 EGFL5 multiple EGF like domains 9 protein-coding chr11-10521 chr11 119660746 119660956 + 6.72 0.000 TTS (NM_002855) TTS (NM_002855) 68349 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr19-6450 chr19 16405343 16405553 + 6.72 0.000 intron (NM_021235, intron 13 of 22) intron (NM_021235, intron 13 of 22) 66522 NM_001258374 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr22-3036 chr22 30718110 30718320 + 6.72 0.000 intron (NM_030758, intron 1 of 13) MLT1H|LTR|ERVL-MaLR -13342 NR_036171 100422912 NR_036171 ENSG00000264661 MIR3200 mir-3200 microRNA 3200 ncRNA chr18-2952 chr18 21712406 21712616 + 6.72 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -7737 NM_138340 171586 Hs.397978 NM_138340 ENSG00000158201 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding chr3-5499 chr3 194350376 194350586 + 6.72 0.000 intron (NM_001080513, intron 1 of 1) MIRb|SINE|MIR 847 NM_001291988 1370 Hs.528368 NM_001309 ENSG00000178772 CPN2 ACBP carboxypeptidase N subunit 2 protein-coding chr22-3400 chr22 36182975 36183185 + 6.72 0.000 Intergenic Intergenic -16903 NM_145641 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr2-8005 chr2 68368787 68368997 + 6.72 0.000 intron (NM_002664, intron 1 of 8) intron (NM_002664, intron 1 of 8) 3610 NM_002664 5341 Hs.468840 NM_002664 ENSG00000115956 PLEK P47 pleckstrin protein-coding chrX-4651 chrX 80121239 80121449 + 6.72 0.000 Intergenic MIRc|SINE|MIR 98284 NM_001303475 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chrX-2156 chrX 35898422 35898632 + 6.72 0.000 Intergenic AluSc8|SINE|Alu -21207 NM_152632 286464 Hs.376425 NM_152632 ENSG00000165164 CFAP47 CHDC2|CXorf22|CXorf30|CXorf59 cilia and flagella associated protein 47 protein-coding chr10-8655 chr10 99927913 99928123 + 6.72 0.000 intron (NR_024130, intron 1 of 4) intron (NR_024130, intron 1 of 4) 813 NR_024130 100188954 Hs.656104 NR_024130 DNMBP-AS1 NCRNA00093 DNMBP antisense RNA 1 ncRNA chr12-3264 chr12 67209620 67209830 + 6.72 0.000 Intergenic MIR|SINE|MIR -59633 NM_018448 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr10-5027 chr10 34343820 34344030 + 6.72 0.000 intron (NM_001184789, intron 14 of 22) intron (NM_001184789, intron 14 of 22) 471371 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr1-15636 chr1 162854332 162854542 + 6.72 0.000 3' UTR (NM_178550, exon 4 of 4) 3' UTR (NM_178550, exon 4 of 4) 14378 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr3-3047 chr3 125075608 125075818 + 6.72 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -19716 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr18-597 chr18 49896865 49897075 + 6.72 0.000 intron (NM_001080467, intron 21 of 39) MIR|SINE|MIR 82947 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr3-7358 chr3 51631262 51631472 + 6.72 0.000 intron (NM_001322253, intron 8 of 23) L3|LINE|CR1 -39808 NR_024012 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr14-3122 chr14 67462097 67462307 + 6.72 0.000 Intergenic Intergenic -20272 NR_049879 100847064 NR_049879 ENSG00000265993 MIR5694 - microRNA 5694 ncRNA chr14-2459 chr14 81435904 81436114 + 6.72 0.000 intron (NM_001366850, intron 1 of 7) CpG 456 NM_001366849 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr6-5830 chr6 25777162 25777372 + 6.72 0.000 intron (NM_005495, intron 10 of 11) LTR108e_Mam|LTR|ERVL 22525 NM_005495 10050 Hs.282931 NM_005495 ENSG00000146039 SLC17A4 KAIA2138 solute carrier family 17 member 4 protein-coding chr5-7862 chr5 72705055 72705265 + 6.72 0.000 Intergenic MER76|LTR|ERVL -44491 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr10-5130 chr10 50572516 50572726 + 6.72 0.000 intron (NM_147156, intron 2 of 10) Charlie15a|DNA|hAT-Charlie 51335 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr2-9718 chr2 61191916 61192126 + 6.72 0.000 intron (NM_014709, intron 76 of 79) intron (NM_014709, intron 76 of 79) 14603 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr8-6120 chr8 28658080 28658290 + 6.72 0.000 Intergenic Intergenic 43279 NR_126027 101929402 Hs.667366 NR_126027 ENSG00000246339 EXTL3-AS1 C8orf50 EXTL3 antisense RNA 1 ncRNA chr3-4045 chr3 74210725 74210935 + 6.72 0.000 Intergenic Intergenic 310310 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr2-10158 chr2 80459292 80459502 + 6.72 0.000 intron (NM_001282599, intron 3 of 11) intron (NM_001282599, intron 3 of 11) 146018 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr2-9900 chr2 224366116 224366326 + 6.72 0.000 Intergenic Intergenic 35773 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chrX-1471 chrX 118849926 118850136 + 6.72 0.000 intron (NR_110393, intron 5 of 6) intron (NR_110393, intron 5 of 6) 10475 NR_110393 101928287 Hs.496647 NR_110393 ENSG00000203650 LINC01285 - long intergenic non-protein coding RNA 1285 ncRNA chr2-9686 chr2 42384390 42384600 + 6.72 0.000 Intergenic Intergenic -15538 NM_001319037 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr4-8512 chr4 161929942 161930152 + 6.72 0.000 intron (NM_001128428, intron 3 of 14) intron (NM_001128428, intron 3 of 14) -92686 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr15-4232 chr15 27696259 27696469 + 6.72 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 402951 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr12-8357 chr12 132029255 132029465 + 6.72 0.000 intron (NM_015409, intron 27 of 52) intron (NM_015409, intron 27 of 52) -1864 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr16-6472 chr16 57592242 57592452 + 6.72 0.000 Intergenic Intergenic -27391 NM_001290142 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr6-3047 chr6 62645390 62645600 + 6.72 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -359268 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr6-6225 chr6 18742562 18742772 + 6.72 0.000 Intergenic Intergenic 170883 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr2-11700 chr2 9481849 9482059 + 6.72 0.000 intron (NM_001320858, intron 4 of 5) MER8|DNA|TcMar-Tigger 6899 NM_001320858 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr12-7188 chr12 49566602 49566812 + 6.72 0.000 promoter-TSS (NM_001012300) promoter-TSS (NM_001012300) -268 NM_001012300 10445 Hs.25313 NM_006337 ENSG00000187778 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding chr6-5123 chr6 121381440 121381650 + 6.72 0.000 Intergenic Intergenic -46816 NM_001367759 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr2-12111 chr2 34585476 34585686 + 6.72 0.000 Intergenic Intergenic -91976 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr9-7739 chr9 74721829 74722039 + 6.72 0.000 TTS (NM_001177310) TTS (NM_001177310) 106400 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr20-4442 chr20 61713809 61714019 + 6.72 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 5834 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr6-3994 chr6 114785925 114786135 + 6.72 0.000 Intergenic Intergenic -723153 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr1-14382 chr1 43572717 43572927 + 6.72 0.000 intron (NM_002840, intron 6 of 33) intron (NM_002840, intron 6 of 33) 41939 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr7-9367 chr7 130153137 130153347 + 6.72 0.000 Intergenic Intergenic 11511 NR_149033 100128325 Hs.105944 NR_149033 ENSG00000229196 LOC100128325 - uncharacterized LOC100128325 ncRNA chr1-15249 chr1 112699317 112699527 + 6.72 0.000 intron (NM_001321324, intron 17 of 20) intron (NM_001321324, intron 17 of 20) 7634 NM_001042679 389 Hs.502659 NM_175744 ENSG00000155366 RHOC ARH9|ARHC|H9|RHOH9 ras homolog family member C protein-coding chr5-4264 chr5 139758222 139758432 + 6.72 0.000 Intergenic Intergenic -12104 NR_105052 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr8-7394 chr8 139444138 139444348 + 6.72 0.000 Intergenic L1MB3|LINE|L1 258880 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr5-4268 chr5 139953428 139953638 + 6.72 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 89766 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr12-8115 chr12 119896069 119896279 + 6.72 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -18854 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr1-12632 chr1 40298952 40299162 + 6.72 0.000 Intergenic L2a|LINE|L2 18229 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr3-6656 chr3 128714952 128715162 + 6.72 0.000 Intergenic Intergenic -11079 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr9-7432 chr9 24322570 24322780 + 6.72 0.000 Intergenic Intergenic 223001 NM_001271706 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr8-5370 chr8 22151389 22151599 + 6.72 0.000 exon (NM_139278, exon 7 of 8) exon (NM_139278, exon 7 of 8) 5312 NM_139278 203190 Hs.33470 NM_139278 ENSG00000168481 LGI3 LGIL4 leucine rich repeat LGI family member 3 protein-coding chr1-12856 chr1 101722062 101722272 + 6.72 0.000 Intergenic L1ME3|LINE|L1 124913 NM_001288821 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr7-6761 chr7 12796685 12796895 + 6.72 0.000 Intergenic Intergenic 109157 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr10-5504 chr10 82277551 82277761 + 6.72 0.000 intron (NM_001370082, intron 3 of 10) intron (NM_001370082, intron 3 of 10) -44736 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chrX-4495 chrX 64923934 64924144 + 6.72 0.000 intron (NM_001178032, intron 1 of 4) intron (NM_001178032, intron 1 of 4) 52411 NR_045044 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr6-6086 chr6 145891480 145891690 + 6.72 0.000 intron (NM_001370328, intron 30 of 31) L2a|LINE|L2 72512 NM_173082 257218 Hs.723297 NM_173082 ENSG00000146414 SHPRH bA545I5.2 SNF2 histone linker PHD RING helicase protein-coding chr5-7240 chr5 10306674 10306884 + 6.72 0.000 intron (NM_138809, intron 1 of 5) intron (NM_138809, intron 1 of 5) 1123 NM_138809 134147 Hs.192586 NM_138809 ENSG00000164237 CMBL JS-1 carboxymethylenebutenolidase homolog protein-coding chr1-13996 chr1 25778370 25778580 + 6.72 0.000 intron (NM_020379, intron 9 of 11) intron (NM_020379, intron 9 of 11) -21718 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr20-4029 chr20 36841798 36842008 + 6.72 0.000 intron (NM_080627, intron 1 of 14) (GT)n|Simple_repeat|Simple_repeat 17970 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr8-2352 chr8 25036454 25036664 + 6.72 0.000 Intergenic AluSx1|SINE|Alu -79690 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr10-7213 chr10 115616866 115617076 + 6.72 0.000 intron (NM_207303, intron 26 of 28) MSTA-int|LTR|ERVL-MaLR 523606 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr3-4568 chr3 168175177 168175387 + 6.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -74240 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr12-4372 chr12 4205018 4205228 + 6.72 0.000 Intergenic L2a|LINE|L2 -68639 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chr8-2693 chr8 93961037 93961247 + 6.72 0.000 Intergenic Intergenic 44195 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr1-15565 chr1 159123675 159123885 + 6.72 0.000 Intergenic Intergenic -46879 NM_001348247 9447 Hs.733411 NM_004833 ENSG00000163568 AIM2 PYHIN4 absent in melanoma 2 protein-coding chr4-7955 chr4 110602015 110602225 + 6.72 0.000 intron (NR_147203, intron 1 of 1) intron (NR_147203, intron 1 of 1) 13338 NR_147203 110231149 Hs.436030 NR_147203 ENSG00000250103 PANCR - PITX2 adjacent non-coding RNA ncRNA chr2-13515 chr2 150813369 150813579 + 6.72 0.000 Intergenic MER1B|DNA|hAT-Charlie 184577 NR_110247 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr9-5359 chr9 90192669 90192879 + 6.72 0.000 Intergenic L1PA4|LINE|L1 -151275 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr3-6675 chr3 130517201 130517411 + 6.72 0.000 Intergenic CpG -43028 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr12-5288 chr12 110832101 110832311 + 6.72 0.000 Intergenic MER77|LTR|ERVL -14781 NM_001286244 160762 Hs.437141 NM_152591 ENSG00000173093 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding chr14-1956 chr14 32843797 32844007 + 6.72 0.000 Intergenic MER91A|DNA|hAT-Tip100 -94977 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr6-7796 chr6 98096338 98096548 + 6.72 0.000 Intergenic Intergenic 71912 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr8-4304 chr8 97927107 97927317 + 6.72 0.000 intron (NM_002380, intron 2 of 18) AluSp|SINE|Alu 58148 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr7-3583 chr7 24203594 24203804 + 6.72 0.000 Intergenic Intergenic -80491 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr12-7153 chr12 48390139 48390349 + 6.72 0.000 Intergenic Intergenic -38998 NM_001172682 121274 Hs.23492 NM_152320 ENSG00000167528 ZNF641 - zinc finger protein 641 protein-coding chr2-9873 chr2 202421476 202421686 + 6.72 0.000 intron (NM_001204, intron 1 of 12) AluYj4|SINE|Alu 45254 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr3-2367 chr3 169818461 169818671 + 6.72 0.000 Intergenic MER34|LTR|ERV1 -3325 NM_001080460 344657 Hs.319484 NM_001080460 ENSG00000188306 LRRIQ4 LRRC64 leucine rich repeats and IQ motif containing 4 protein-coding chr22-2171 chr22 44329575 44329785 + 6.72 0.000 Intergenic Intergenic -16729 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr3-8732 chr3 194754289 194754499 + 6.72 0.000 intron (NR_037891, intron 3 of 3) MER5A|DNA|hAT-Charlie 14315 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr7-4765 chr7 74625552 74625762 + 6.72 0.000 Intergenic AluJr|SINE|Alu 29689 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr10-8372 chr10 80697939 80698149 + 6.72 0.000 Intergenic Intergenic 48247 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr6-6106 chr6 151298132 151298342 + 6.72 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) -27294 NM_144497 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr7-9412 chr7 132205038 132205248 + 6.72 0.000 intron (NM_020911, intron 10 of 31) intron (NM_020911, intron 10 of 31) -55718 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr1-13562 chr1 7588360 7588570 + 6.72 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -81265 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr10-4395 chr10 51224069 51224279 + 6.72 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) -75399 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr4-7638 chr4 84021511 84021721 + 6.72 0.000 intron (NR_125909, intron 7 of 8) intron (NR_125909, intron 7 of 8) 277553 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr6-4403 chr6 26271439 26271649 + 6.72 0.000 promoter-TSS (NM_003534) promoter-TSS (NM_003534) -160 NM_003534 8355 Hs.247813 NM_003534 ENSG00000273983 HIST1H3G H3/h|H3FH histone cluster 1 H3 family member g protein-coding chr9-7422 chr9 22383983 22384193 + 6.72 0.000 Intergenic Intergenic -62736 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr18-2389 chr18 79985904 79986114 + 6.72 0.000 intron (NM_001305564, intron 1 of 2) intron (NM_001305564, intron 1 of 2) 2554 NM_001305557 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding chr14-3522 chr14 103722125 103722335 + 6.72 0.000 intron (NM_024071, intron 1 of 6) intron (NM_024071, intron 1 of 6) 6486 NM_024071 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr18-1650 chr18 59084211 59084421 + 6.72 0.000 Intergenic Intergenic 48637 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr4-4459 chr4 54423196 54423406 + 6.72 0.000 Intergenic Intergenic 90409 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr6-4850 chr6 86390157 86390367 + 6.72 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -547266 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr19-6068 chr19 2730333 2730543 + 6.72 0.000 Intergenic Intergenic -9066 NM_145173 148252 Hs.172753 NM_145173 ENSG00000176490 DIRAS1 Di-Ras1|GBTS1|RIG DIRAS family GTPase 1 protein-coding chr7-9342 chr7 129064341 129064551 + 6.72 0.000 Intergenic AluSz|SINE|Alu 9223 NR_002187 286016 Hs.369665 NR_002187 ENSG00000230359 TPI1P2 - triosephosphate isomerase 1 pseudogene 2 pseudo chr1-11660 chr1 1666457 1666667 + 6.72 0.000 intron (NM_001110781, intron 8 of 8) L1MC5a|LINE|L1 -7558 NM_033489 984 Hs.651228 NM_001787 ENSG00000248333 CDK11B CDC2L1|CDK11|CDK11-p110|CDK11-p46|CDK11-p58|CLK-1|PITSLREA|PK58|p58|p58CDC2L1|p58CLK-1 cyclin dependent kinase 11B protein-coding chr19-2979 chr19 19347726 19347936 + 6.72 0.000 intron (NM_015329, intron 13 of 18) intron (NM_015329, intron 13 of 18) 27002 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chr7-3373 chr7 101665398 101665608 + 6.72 0.000 Intergenic Intergenic -36207 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr2-5878 chr2 240687621 240687831 + 6.72 0.000 non-coding (NR_149021, exon 1 of 3) non-coding (NR_149021, exon 1 of 3) 1392 NR_149021 285191 Hs.729906 NR_149021 LOC285191 - uncharacterized LOC285191 ncRNA chr22-3213 chr22 38764491 38764701 + 6.72 0.000 Intergenic Intergenic -8598 NM_015374 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr7-4986 chr7 154894639 154894849 + 6.72 0.000 TTS (NM_001364498) TTS (NM_001364498) -33773 NR_024476 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr14-4317 chr14 21978493 21978703 + 6.72 0.000 Intergenic Intergenic -307581 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr10-2393 chr10 117271706 117271916 + 6.72 0.000 intron (NM_003054, intron 15 of 15) intron (NM_003054, intron 15 of 15) 30697 NM_003054 6571 Hs.596992 NM_003054 ENSG00000165646 SLC18A2 PKDYS2|SVAT|SVMT|VAT2|VMAT2 solute carrier family 18 member A2 protein-coding chr3-3857 chr3 36904798 36905008 + 6.72 0.000 intron (NM_014831, intron 1 of 22) LTR16A1|LTR|ERVL 40151 NM_001329998 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding chr5-3359 chr5 137933608 137933818 + 6.72 0.000 intron (NM_001300921, intron 12 of 14) ERVL-E-int|LTR|ERVL 44256 NM_001258449 27039 Hs.716884 NM_014386 ENSG00000078795 PKD2L2 TRPP5 polycystin 2 like 2, transient receptor potential cation channel protein-coding chr14-3662 chr14 89394952 89395162 + 6.72 0.000 intron (NM_001085471, intron 2 of 6) Charlie19a|DNA|hAT-Charlie 22176 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr21-1868 chr21 42544522 42544732 + 6.72 0.000 intron (NM_001320537, intron 8 of 19) intron (NM_001320537, intron 8 of 19) 30775 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr11-5430 chr11 69369907 69370117 + 6.72 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -55643 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr6-4837 chr6 84036047 84036257 + 6.72 0.000 intron (NM_001346544, intron 1 of 3) (TT)n|Simple_repeat|Simple_repeat 2033 NM_001346544 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr21-460 chr21 33403725 33403935 + 6.72 0.000 intron (NM_005534, intron 1 of 6) CpG 934 NM_005534 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr2-13599 chr2 158211624 158211834 + 6.72 0.000 intron (NR_038850, intron 4 of 4) intron (NR_038850, intron 4 of 4) 45079 NR_038850 554201 Hs.570262 NR_038850 ENSG00000227480 CCDC148-AS1 - CCDC148 antisense RNA 1 ncRNA chr3-3400 chr3 70624828 70625038 + 6.72 0.000 Intergenic Intergenic -312295 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr6-6241 chr6 26188900 26189110 + 6.72 0.000 promoter-TSS (NM_003539) promoter-TSS (NM_003539) 71 NM_003539 8360 Hs.248179 NM_003539 ENSG00000277157 HIST1H4D H4/b|H4FB|dJ221C16.9 histone cluster 1 H4 family member d protein-coding chr20-2932 chr20 1370678 1370888 + 6.72 0.000 TTS (NM_054014) TTS (NM_054014) 22178 NR_106929 102465524 NR_106929 ENSG00000284436 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA chr11-6833 chr11 95386993 95387203 + 6.72 0.000 Intergenic MIR|SINE|MIR -154623 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr13-2636 chr13 78660306 78660516 + 6.72 0.000 Intergenic AluSz|SINE|Alu -1256 NM_024546 79596 Hs.567576 NM_024546 ENSG00000152193 OBI1 C13orf7|RNF219 ORC ubiquitin ligase 1 protein-coding chr4-2945 chr4 101693725 101693935 + 6.72 0.000 Intergenic Intergenic -96777 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr10-6187 chr10 21750601 21750811 + 6.72 0.000 Intergenic Intergenic 216534 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr18-3504 chr18 74061949 74062159 + 6.72 0.000 Intergenic Intergenic 85780 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr8-1754 chr8 29341625 29341835 + 6.72 0.000 intron (NM_001394, intron 1 of 3) intron (NM_001394, intron 1 of 3) 7075 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr5-8674 chr5 141051093 141051303 + 6.72 0.000 promoter-TSS (NM_013340) promoter-TSS (NM_013340) -178 NM_013340 29930 Hs.278950 NM_013340 ENSG00000171815 PCDHB1 PCDH-BETA1 protocadherin beta 1 protein-coding chr17-3477 chr17 43994929 43995139 + 6.72 0.000 intron (NM_004160, intron 1 of 6) CpG 9435 NM_004160 5697 Hs.169249 NM_004160 ENSG00000131096 PYY PYY-I|PYY1 peptide YY protein-coding chr12-3864 chr12 109647742 109647952 + 6.72 0.000 Intergenic MIR|SINE|MIR -65978 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr1-9062 chr1 15081177 15081387 + 6.72 0.000 intron (NM_201628, intron 8 of 14) MER63A|DNA|hAT-Blackjack 71182 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr5-8519 chr5 134042273 134042483 + 6.72 0.000 Intergenic Intergenic -37403 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr11-10411 chr11 114870644 114870854 + 6.72 0.000 Intergenic Intergenic 192222 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr1-16665 chr1 242043103 242043313 + 6.72 0.000 Intergenic L1M1|LINE|L1 -44110 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr1-13520 chr1 6025388 6025598 + 6.72 0.000 promoter-TSS (NM_003636) promoter-TSS (NM_003636) -840 NM_003636 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chrX-4747 chrX 93893860 93894070 + 6.72 0.000 Intergenic L1MA1|LINE|L1 219759 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chrX-1313 chrX 129535297 129535507 + 6.72 0.000 Intergenic Intergenic -4857 NM_001587 4952 Hs.126357 NM_000276 ENSG00000122126 OCRL INPP5F|LOCR|NPHL2|OCRL-1|OCRL1 OCRL inositol polyphosphate-5-phosphatase protein-coding chr5-3668 chr5 161191289 161191499 + 6.72 0.000 Intergenic AluSq2|SINE|Alu -252768 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr12-2295 chr12 116053939 116054149 + 6.72 0.000 intron (NM_015335, intron 4 of 30) intron (NM_015335, intron 4 of 30) 94610 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr9-7172 chr9 134836978 134837188 + 6.72 0.000 intron (NM_001278074, intron 65 of 65) intron (NM_001278074, intron 65 of 65) 12286 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr1-8099 chr1 7517807 7518017 + 6.72 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -128158 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr21-1433 chr21 25004812 25005022 + 6.72 0.000 intron (NR_046198, intron 2 of 3) MLT1B|LTR|ERVL-MaLR 164367 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LINC01692 - long intergenic non-protein coding RNA 1692 ncRNA chr8-4943 chr8 109811552 109811762 + 6.72 0.000 Intergenic Intergenic -119866 NM_001099744 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr20-487 chr20 49617517 49617727 + 6.72 0.000 Intergenic Intergenic -49485 NM_000961 5740 Hs.302085 NM_000961 ENSG00000124212 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 synthase protein-coding chr6-5785 chr6 2599417 2599627 + 6.72 0.000 Intergenic Intergenic -34978 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr1-5256 chr1 203607390 203607600 + 6.72 0.000 Intergenic Intergenic -19292 NM_001001396 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr6-8190 chr6 133392747 133392957 + 6.72 0.000 intron (NM_172103, intron 3 of 18) intron (NM_172103, intron 3 of 18) 151353 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr20-1080 chr20 45961378 45961588 + 6.72 0.000 intron (NM_022095, intron 10 of 27) MER103C|DNA|hAT-Charlie 10720 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding chr19-5325 chr19 3422621 3422831 + 6.72 0.000 intron (NM_001245002, intron 2 of 10) AluY|SINE|Alu 56143 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr16-6436 chr16 56677021 56677231 + 6.72 0.000 intron (NR_104045, intron 2 of 2) intron (NR_104045, intron 2 of 2) 1010 NR_104046 644314 Hs.434199 NM_175621 MT1IP MT1|MT1I|MTE metallothionein 1I, pseudogene pseudo chr4-6465 chr4 144442256 144442466 + 6.72 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 203658 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA chr9-6581 chr9 124640477 124640687 + 6.72 0.000 intron (NM_033334, intron 2 of 9) AluJr4|SINE|Alu -17854 NR_038975 100379345 Hs.660412 NR_038975 ENSG00000224020 MIR181A2HG - MIR181A2 host gene ncRNA chr7-7469 chr7 93316575 93316785 + 6.72 0.000 intron (NM_001257998, intron 21 of 28) L2c|LINE|L2 84314 NM_017667 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr4-5302 chr4 178348110 178348320 + 6.72 0.000 Intergenic Intergenic -440279 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr19-6956 chr19 47548849 47549059 + 6.72 0.000 intron (NM_001277075, intron 4 of 16) AluSx1|SINE|Alu 24194 NM_001277075 84215 Hs.14161 NM_032255 ENSG00000118156 ZNF541 - zinc finger protein 541 protein-coding chr3-6255 chr3 69160555 69160765 + 6.72 0.000 Intergenic MIRb|SINE|MIR -38065 NM_198271 56203 Hs.350621 NM_198271 ENSG00000163380 LMOD3 NEM10 leiomodin 3 protein-coding chr11-8741 chr11 8314163 8314373 + 6.72 0.000 Intergenic MER91A|DNA|hAT-Tip100 -45481 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr9-7756 chr9 75993489 75993699 + 6.72 0.000 intron (NR_120409, intron 3 of 19) MER68|LTR|ERVL 102921 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr9-5119 chr9 35949386 35949596 + 6.72 0.000 Intergenic Intergenic 8663 NM_019897 56656 Hs.553540 NM_019897 ENSG00000278889 OR2S2 OR37A|OST715 olfactory receptor family 2 subfamily S member 2 (gene/pseudogene) protein-coding chr8-5423 chr8 31343591 31343801 + 6.72 0.000 Intergenic Intergenic -296056 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr11-9135 chr11 33880988 33881198 + 6.72 0.000 intron (NM_005574, intron 2 of 5) intron (NM_005574, intron 2 of 5) 10983 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr19-4453 chr19 4928432 4928642 + 6.72 0.000 intron (NM_001290051, intron 2 of 16) intron (NM_001290051, intron 2 of 16) -4150 NR_039902 100616337 NR_039902 ENSG00000263409 MIR4747 mir-4747 microRNA 4747 ncRNA chrX-1901 chrX 137016873 137017083 + 6.72 0.000 Intergenic Intergenic 14696 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr4-4351 chr4 38371571 38371781 + 6.72 0.000 intron (NR_149123, intron 1 of 1) LTR81|LTR|Gypsy 4762 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr16-6539 chr16 63744911 63745121 + 6.72 0.000 Intergenic L1PA13|LINE|L1 1377047 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr5-8335 chr5 118405124 118405334 + 6.72 0.000 intron (NR_104610, intron 9 of 9) L1PA10|LINE|L1 122655 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr7-6633 chr7 123814667 123814877 + 6.72 0.000 non-coding (NR_002731, exon 1 of 2) non-coding (NR_002731, exon 1 of 2) 633 NR_002731 26062 Hs.381305 NR_002731 HYAL6P HYAL6|HYALP1 hyaluronidase 6, pseudogene pseudo chrX-3253 chrX 79550988 79551198 + 6.72 0.000 Intergenic Intergenic -183541 NM_001171581 9452 Hs.17109 NM_004867 ENSG00000078596 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding chr2-11423 chr2 220814097 220814307 + 6.72 0.000 Intergenic Intergenic 758102 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr1-5464 chr1 83571949 83572159 + 6.72 0.000 Intergenic Intergenic 126000 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr2-3534 chr2 241716181 241716391 + 6.72 0.000 intron (NM_032329, intron 5 of 7) AluSz|SINE|Alu 14247 NM_032329 84289 Hs.529172 NM_032329 ENSG00000168395 ING5 p28ING5 inhibitor of growth family member 5 protein-coding chr22-3127 chr22 20714943 20715153 + 6.72 0.000 intron (NM_058004, intron 45 of 54) intron (NM_058004, intron 45 of 54) 13934 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chrX-5331 chrX 146396389 146396599 + 6.72 0.000 Intergenic L1M1|LINE|L1 -368622 NR_030581 100126341 NR_030581 ENSG00000216056 MIR891A MIRN891A microRNA 891a ncRNA chr12-8305 chr12 128514723 128514933 + 6.72 0.000 intron (NM_001136103, intron 2 of 8) L2a|LINE|L2 220736 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr3-7480 chr3 141819747 141819957 + 6.72 0.000 Intergenic HERV17-int|LTR|ERV1 41651 NM_139209 131890 Hs.680654 NM_139209 ENSG00000114124 GRK7 GPRK7 G protein-coupled receptor kinase 7 protein-coding chrX-3146 chrX 17866445 17866655 + 6.72 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -5213 NM_001172743 10742 Hs.446680 NM_021785 ENSG00000131831 RAI2 - retinoic acid induced 2 protein-coding chr8-5608 chr8 95562483 95562693 + 6.72 0.000 intron (NR_038207, intron 2 of 2) intron (NR_038207, intron 2 of 2) -293387 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr9-7331 chr9 13616366 13616576 + 6.72 0.000 Intergenic L3b|LINE|CR1 -185142 NR_033863 401492 Hs.632651 NR_033863 ENSG00000270547 LINC01235 - long intergenic non-protein coding RNA 1235 ncRNA chrX-4761 chrX 95238517 95238727 + 6.72 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -175396 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr2-10688 chr2 25090759 25090969 + 6.72 0.000 intron (NM_001319099, intron 1 of 22) intron (NM_001319099, intron 1 of 22) 48401 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr7-4764 chr7 74493816 74494026 + 6.72 0.000 intron (NM_016328, intron 1 of 26) AluJr|SINE|Alu 40015 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr12-2880 chr12 27014261 27014471 + 6.72 0.000 promoter-TSS (NM_016551) promoter-TSS (NM_016551) 18 NM_016551 51768 Hs.438641 NM_016551 ENSG00000064115 TM7SF3 - transmembrane 7 superfamily member 3 protein-coding chr8-1799 chr8 101126600 101126810 + 6.72 0.000 Intergenic CpG 74651 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr10-2940 chr10 25344639 25344849 + 6.72 0.000 intron (NM_020752, intron 2 of 10) intron (NM_020752, intron 2 of 10) -168468 NR_027333 100128811 Hs.700407 NR_027333 ENSG00000233642 GPR158-AS1 - GPR158 antisense RNA 1 ncRNA chr9-6833 chr9 38487648 38487858 + 6.72 0.000 Intergenic CpG 57619 NR_047651 100289137 Hs.644630 NR_047651 ENSG00000283486 FAM95C - family with sequence similarity 95 member C ncRNA chr18-3207 chr18 46456475 46456685 + 6.72 0.000 exon (NM_001256758, exon 6 of 6) exon (NM_001256758, exon 6 of 6) 62506 NM_001145473 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr4-2346 chr4 186134299 186134509 + 6.72 0.000 intron (NM_001367768, intron 1 of 13) intron (NM_001367768, intron 1 of 13) -9883 NM_001006655 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr4-4575 chr4 75512155 75512365 + 6.72 0.000 intron (NM_001278538, intron 1 of 8) L2|LINE|L2 2170 NM_001278539 25898 Hs.48297 NM_015436 ENSG00000163743 RCHY1 ARNIP|CHIMP|PIRH2|PRO1996|RNF199|ZCHY|ZNF363 ring finger and CHY zinc finger domain containing 1 protein-coding chr10-6483 chr10 44100999 44101209 + 6.72 0.000 Intergenic MER68|LTR|ERVL 188702 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr20-4342 chr20 54195495 54195705 + 6.72 0.000 Intergenic LTR16E2|LTR|ERVL -12487 NM_002623 5203 Hs.91161 NM_002623 ENSG00000101132 PFDN4 C1|PFD4 prefoldin subunit 4 protein-coding chr10-8849 chr10 110840891 110841101 + 6.72 0.000 Intergenic Intergenic 29908 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr7-7270 chr7 32037759 32037969 + 6.72 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 32543 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr18-3377 chr18 59190169 59190379 + 6.72 0.000 Intergenic ERVL-E-int|LTR|ERVL -29884 NM_001012513 2922 Hs.153444 NM_002091 ENSG00000134443 GRP BN|GRP-10|preproGRP|proGRP gastrin releasing peptide protein-coding chrX-3734 chrX 120224843 120225053 + 6.72 0.000 Intergenic Intergenic 20319 NR_027131 158801 Hs.442518 NM_173522 ENSG00000233382 NKAPP1 CXorf42 NFKB activating protein pseudogene 1 pseudo chr17-6429 chr17 5270605 5270815 + 6.72 0.000 Intergenic AluSq2|SINE|Alu -11574 NM_001291582 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr2-7049 chr2 160349037 160349247 + 6.72 0.000 intron (NM_002897, intron 2 of 13) MER117|DNA|hAT-Charlie 58740 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr6-8049 chr6 120925830 120926040 + 6.72 0.000 Intergenic HERVH-int|LTR|ERV1 408545 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr19-3814 chr19 7541156 7541366 + 6.72 0.000 intron (NM_001166111, intron 9 of 33) intron (NM_001166111, intron 9 of 33) 5544 NM_001166114 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chr3-3849 chr3 33474834 33475044 + 6.72 0.000 Intergenic AluJo|SINE|Alu -34534 NM_001128161 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr1-13702 chr1 14403718 14403928 + 6.72 0.000 intron (NR_149058, intron 1 of 4) LTR9A1|LTR|ERV1 16150 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr16-5689 chr16 74430072 74430282 + 6.72 0.000 Intergenic Intergenic -8707 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr5-8268 chr5 112581554 112581764 + 6.72 0.000 Intergenic HERVL32-int|LTR|ERVL -46777 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr10-6295 chr10 100462803 100463013 + 6.72 0.000 promoter-TSS (NM_003393) promoter-TSS (NM_003393) -101 NM_003393 7479 Hs.421281 NM_003393 ENSG00000075290 WNT8B - Wnt family member 8B protein-coding chr21-1137 chr21 38544866 38545076 + 6.72 0.000 intron (NR_111949, intron 3 of 4) intron (NR_111949, intron 3 of 4) 39974 NM_001243429 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr6-4484 chr6 36599880 36600090 + 6.72 0.000 non-coding (NR_036610, exon 4 of 7) non-coding (NR_036610, exon 4 of 7) 5623 NM_003017 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr11-9315 chr11 45828635 45828845 + 6.72 0.000 Intergenic MIRb|SINE|MIR -18378 NM_001127457 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr6-6454 chr6 103625164 103625374 + 6.72 0.000 Intergenic MSTA|LTR|ERVL-MaLR 1234277 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr9-7857 chr9 85518772 85518982 + 6.72 0.000 Intergenic Intergenic 223152 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr8-5967 chr8 21020759 21020969 + 6.72 0.000 Intergenic Intergenic 46878 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LINC02153 - long intergenic non-protein coding RNA 2153 ncRNA chr13-3428 chr13 100455308 100455518 + 6.72 0.000 intron (NR_148027, intron 22 of 23) L1ME3D|LINE|L1 25602 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr5-7447 chr5 31661575 31661785 + 6.72 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 22549 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr12-5924 chr12 69169190 69169400 + 6.72 0.000 Intergenic MER51A|LTR|ERV1 -70274 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr3-10021 chr3 102181531 102181741 + 6.72 0.000 Intergenic Intergenic 17931 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr18-2430 chr18 24107180 24107390 + 6.72 0.000 intron (NM_001135993, intron 6 of 13) intron (NM_001135993, intron 6 of 13) -6042 NM_001292030 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr8-3209 chr8 124034333 124034543 + 6.72 0.000 intron (NM_001039112, intron 18 of 40) intron (NM_001039112, intron 18 of 40) 6344 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr1-6176 chr1 201559623 201559833 + 6.72 0.000 Intergenic Intergenic 39824 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr13-2969 chr13 64912263 64912473 + 6.72 0.000 Intergenic L1PREC2|LINE|L1 -836357 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr6-7655 chr6 83569763 83569973 + 6.72 0.000 intron (NM_001242792, intron 25 of 28) THE1B|LTR|ERVL-MaLR 57334 NM_001170423 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr2-13972 chr2 189167833 189168043 + 6.72 0.000 intron (NM_000393, intron 1 of 53) intron (NM_000393, intron 1 of 53) 11823 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chrX-4767 chrX 95830098 95830308 + 6.72 0.000 Intergenic L1PA14|LINE|L1 507699 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr9-4861 chr9 2260722 2260932 + 6.72 0.000 Intergenic Intergenic 102371 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr20-1926 chr20 9500107 9500317 + 6.72 0.000 Intergenic Intergenic -14146 NM_001199897 24141 Hs.22920 NM_012261 ENSG00000125869 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46 lysosomal associated membrane protein family member 5 protein-coding chr7-5436 chr7 37442134 37442344 + 6.72 0.000 intron (NM_001206480, intron 1 of 21) intron (NM_001206480, intron 1 of 21) 6713 NM_014800 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr8-6183 chr8 34042613 34042823 + 6.72 0.000 Intergenic LTR107_Mam|LTR|LTR -442612 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr14-2532 chr14 20855833 20856043 + 6.72 0.000 Intergenic Intergenic -35465 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding chr1-12780 chr1 77991597 77991807 + 6.72 0.000 intron (NM_001317099, intron 1 of 3) Tigger17a|DNA|TcMar-Tigger 11518 NM_001317099 11080 Hs.13852 NM_007034 ENSG00000162616 DNAJB4 DNAJW|DjB4|HLJ1 DnaJ heat shock protein family (Hsp40) member B4 protein-coding chrX-5302 chrX 142980958 142981168 + 6.72 0.000 Intergenic L2|LINE|L2 -44865 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr5-5357 chr5 132283415 132283625 + 6.72 0.000 Intergenic LTR57-int|LTR|ERVL -10874 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding chr1-7690 chr1 21839551 21839761 + 6.72 0.000 intron (NM_005529, intron 72 of 96) intron (NM_005529, intron 72 of 96) 27391 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr12-4086 chr12 55538420 55538630 + 6.72 0.000 Intergenic Intergenic -12702 NM_001005494 341418 Hs.495021 NM_001005494 ENSG00000179626 OR6C4 OR12-10 olfactory receptor family 6 subfamily C member 4 protein-coding chrX-4831 chrX 102905570 102905780 + 6.72 0.000 non-coding (NR_146591, exon 10 of 10) non-coding (NR_146591, exon 10 of 10) -31597 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr20-2951 chr20 23825933 23826143 + 6.72 0.000 intron (NM_001322, intron 1 of 2) intron (NM_001322, intron 1 of 2) 691 NM_001322 1470 Hs.669305 NM_001322 ENSG00000170369 CST2 - cystatin SA protein-coding chr4-7223 chr4 42913189 42913399 + 6.72 0.000 intron (NM_001080476, intron 1 of 3) THE1C-int|LTR|ERVL-MaLR 20028 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chrX-3474 chrX 33313552 33313762 + 6.72 0.000 intron (NM_000109, intron 1 of 78) intron (NM_000109, intron 1 of 78) 25731 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-8092 chr3 13665753 13665963 + 6.72 0.000 intron (NR_027103, intron 1 of 5) intron (NR_027103, intron 1 of 5) 15137 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr17-7311 chr17 4610647 4610857 + 6.72 0.000 non-coding (NR_145431, exon 1 of 2) non-coding (NR_145431, exon 1 of 2) 303 NR_145431 400568 Hs.434312 NR_145431 ENSG00000261863 LINC01996 - long intergenic non-protein coding RNA 1996 ncRNA chr3-5633 chr3 10597158 10597368 + 6.72 0.000 intron (NM_001353564, intron 1 of 20) intron (NM_001353564, intron 1 of 20) 22698 NM_001353564 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr2-11646 chr2 6333599 6333809 + 6.72 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 41718 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chrX-1032 chrX 77931977 77932187 + 6.72 0.000 intron (NM_001282224, intron 1 of 21) SVA_D|Retroposon|SVA 21389 NM_000052 538 Hs.496414 NM_000052 ENSG00000165240 ATP7A DSMAX|MK|MNK|SMAX3 ATPase copper transporting alpha protein-coding chr1-15971 chr1 193378438 193378648 + 6.72 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 73798 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr6-3264 chr6 150817840 150818050 + 6.72 0.000 intron (NM_001329803, intron 8 of 13) intron (NM_001329803, intron 8 of 13) -47734 NR_146719 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr5-7760 chr5 61420321 61420531 + 6.72 0.000 intron (NM_020928, intron 1 of 13) MamRTE1|LINE|RTE-BovB 88168 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr7-6937 chr7 88358197 88358407 + 6.72 0.000 Intergenic Intergenic -51408 NM_024636 79689 Hs.521008 NM_024636 ENSG00000127954 STEAP4 STAMP2|SchLAH|TIARP|TNFAIP9 STEAP4 metalloreductase protein-coding chr20-1441 chr20 48092595 48092805 + 6.72 0.000 Intergenic Intergenic -102583 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA chr7-5743 chr7 74048577 74048787 + 6.72 0.000 intron (NM_001278915, intron 15 of 32) (CATC)n|Simple_repeat|Simple_repeat 20509 NM_001278916 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr11-3581 chr11 61688690 61688900 + 6.72 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 8404 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr14-4426 chr14 32215633 32215843 + 6.72 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -12469 NR_004394 26827 NR_004394 ENSG00000206625 RNU6-1 RNU6|RNU6A|U6|U6-1 RNA, U6 small nuclear 1 snRNA chr11-5799 chr11 6050932 6051142 + 6.72 0.000 Intergenic Intergenic -23296 NM_001001917 120796 Hs.553543 NM_001001917 ENSG00000180934 OR56A1 OR11-75 olfactory receptor family 56 subfamily A member 1 protein-coding chr16-5652 chr16 67572303 67572513 + 6.72 0.000 intron (NM_001191022, intron 2 of 9) intron (NM_001191022, intron 2 of 9) 1635 NM_001363916 10664 Hs.368367 NM_006565 ENSG00000102974 CTCF MRD21 CCCTC-binding factor protein-coding chr8-2940 chr8 27467272 27467482 + 6.72 0.000 intron (NM_001347705, intron 4 of 6) intron (NM_001347705, intron 4 of 6) 11884 NM_001347707 1135 Hs.57718 NM_000742 ENSG00000120903 CHRNA2 - cholinergic receptor nicotinic alpha 2 subunit protein-coding chr14-2942 chr14 47063993 47064203 + 6.72 0.000 intron (NM_001113498, intron 6 of 16) intron (NM_001113498, intron 6 of 16) 279148 NR_103766 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr6-6237 chr6 24928114 24928324 + 6.72 0.000 intron (NM_001286446, intron 1 of 13) intron (NM_001286446, intron 1 of 13) 7741 NM_001286445 9750 Hs.559459 NM_014722 ENSG00000111913 RIPOR2 C6orf32|DFNB104|DIFF40|DIFF48|FAM65B|MYONAP|PL48 RHO family interacting cell polarization regulator 2 protein-coding chr5-3183 chr5 75718920 75719130 + 6.72 0.000 intron (NR_149046, intron 1 of 2) intron (NR_149046, intron 1 of 2) -1588 NM_001099271 134359 Hs.432726 NM_152408 ENSG00000152359 POC5 C5orf37 POC5 centriolar protein protein-coding chr10-5591 chr10 92603670 92603880 + 6.72 0.000 intron (NM_004523, intron 1 of 21) AluSx1|SINE|Alu 10645 NM_004523 3832 Hs.8878 NM_004523 ENSG00000138160 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding chr2-13376 chr2 137535912 137536122 + 6.72 0.000 intron (NM_001316349, intron 15 of 27) L2b|LINE|L2 391915 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr11-7626 chr11 57049551 57049761 + 6.72 0.000 Intergenic MER90a|LTR|ERV1 12122 NR_036445 219525 Hs.554519 NR_036445 ENSG00000283307 OR5AK4P PJCG3 olfactory receptor family 5 subfamily AK member 4 pseudogene pseudo chr20-3330 chr20 22961059 22961269 + 6.72 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -74256 NM_001052 6754 Hs.673846 NM_001052 ENSG00000132671 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding chr1-15774 chr1 175071856 175072066 + 6.72 0.000 intron (NM_022093, intron 1 of 18) L2b|LINE|L2 4128 NM_022093 63923 Hs.156369 NM_022093 ENSG00000120332 TNN TN-W tenascin N protein-coding chr12-3597 chr12 51278225 51278435 + 6.72 0.000 Intergenic AluSz6|SINE|Alu -7915 NM_001031628 57228 Hs.652389 NM_001031628 ENSG00000170545 SMAGP hSMAGP small cell adhesion glycoprotein protein-coding chr3-8564 chr3 152356068 152356278 + 6.72 0.000 intron (NM_001314057, intron 2 of 11) intron (NM_001314057, intron 2 of 11) -15183 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr5-4187 chr5 110182963 110183173 + 6.72 0.000 Intergenic L1M4c|LINE|L1 299886 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chrX-3340 chrX 132060338 132060548 + 6.72 0.000 intron (NM_016542, intron 3 of 11) intron (NM_016542, intron 3 of 11) 36854 NM_001042452 51765 Hs.444247 NM_016542 ENSG00000134602 STK26 MASK|MST4 serine/threonine kinase 26 protein-coding chrX-4632 chrX 77922658 77922868 + 6.72 0.000 intron (NM_001282224, intron 1 of 21) L2c|LINE|L2 12070 NM_000052 538 Hs.496414 NM_000052 ENSG00000165240 ATP7A DSMAX|MK|MNK|SMAX3 ATPase copper transporting alpha protein-coding chr1-14799 chr1 71638144 71638354 + 6.72 0.000 intron (NM_173808, intron 4 of 6) intron (NM_173808, intron 4 of 6) 198763 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr6-6489 chr6 114428990 114429200 + 6.72 0.000 Intergenic Intergenic -366218 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chrX-3264 chrX 86495206 86495416 + 6.72 0.000 intron (NM_001139515, intron 2 of 11) AluSx3|SINE|Alu 232343 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr2-13386 chr2 138323717 138323927 + 6.72 0.000 Intergenic L2|LINE|L2 -177948 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr19-5363 chr19 6528552 6528762 + 6.72 0.000 Intergenic AluJo|SINE|Alu -2369 NM_003811 8744 Hs.1524 NM_003811 ENSG00000125657 TNFSF9 4-1BB-L|CD137L|TNLG5A TNF superfamily member 9 protein-coding chr5-9037 chr5 168867836 168868046 + 6.72 0.000 intron (NM_003062, intron 5 of 35) intron (NM_003062, intron 5 of 35) -99686 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chrX-4645 chrX 79173794 79174004 + 6.72 0.000 3' UTR (NM_032553, exon 1 of 1) 3' UTR (NM_032553, exon 1 of 1) 2927 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr4-4577 chr4 75612244 75612454 + 6.72 0.000 intron (NM_003948, intron 3 of 11) MamRep605|LTR?|LTR? 18179 NM_001330724 8999 Hs.591698 NM_003948 ENSG00000138769 CDKL2 KKIAMRE|P56 cyclin dependent kinase like 2 protein-coding chr18-3334 chr18 56945672 56945882 + 6.72 0.000 intron (NM_015285, intron 25 of 27) MER5A|DNA|hAT-Charlie 126342 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr5-4402 chr5 180595968 180596178 + 6.72 0.000 Intergenic Intergenic -4574 NM_052863 92304 Hs.62492 NM_052863 ENSG00000161055 SCGB3A1 HIN-1|HIN1|LU105|PnSP-2|UGRP2 secretoglobin family 3A member 1 protein-coding chr1-8093 chr1 6708329 6708539 + 6.72 0.000 Intergenic L2a|LINE|L2 -6618 NM_018198 55735 Hs.462640 NM_018198 ENSG00000007923 DNAJC11 dJ126A5.1 DnaJ heat shock protein family (Hsp40) member C11 protein-coding chr17-5026 chr17 1295132 1295342 + 6.72 0.000 intron (NM_172367, intron 1 of 2) intron (NM_172367, intron 1 of 2) 15575 NM_172367 286753 Hs.146059 NM_172367 ENSG00000184811 TRARG1 BEC-1|DSPB1|IFITMD3|LOST1|TUSC5 trafficking regulator of GLUT4 (SLC2A4) 1 protein-coding chr1-5763 chr1 150214869 150215079 + 6.72 0.000 Intergenic Intergenic 19704 NM_001136479 81611 Hs.656466 NM_030920 ENSG00000143401 ANP32E LANP-L|LANPL acidic nuclear phosphoprotein 32 family member E protein-coding chr2-6898 chr2 96174472 96174682 + 6.72 0.000 Intergenic Intergenic -29137 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr1-6832 chr1 98020043 98020253 + 6.72 0.000 intron (NR_046105, intron 3 of 4) AluSx1|SINE|Alu 25203 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr16-3488 chr16 3092513 3092723 + 6.72 0.000 exon (NM_001282416, exon 2 of 5) exon (NM_001282416, exon 2 of 5) 6676 NM_001365272 84891 Hs.334515 NM_032805 ENSG00000130182 ZSCAN10 ZFP206|ZNF206 zinc finger and SCAN domain containing 10 protein-coding chr8-4276 chr8 94844166 94844376 + 6.72 0.000 intron (NR_073445, intron 10 of 27) AluSx|SINE|Alu 20981 NR_073444 55656 Hs.727669 NM_017864 ENSG00000164941 INTS8 C8orf52|INT8 integrator complex subunit 8 protein-coding chr11-10587 chr11 123202257 123202467 + 6.72 0.000 Intergenic Intergenic -7114 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr17-2687 chr17 49588561 49588771 + 6.72 0.000 Intergenic Intergenic 12795 NM_007225 11248 Hs.55069 NM_007225 ENSG00000182575 NXPH3 NPH3 neurexophilin 3 protein-coding chr14-4521 chr14 39372676 39372886 + 6.72 0.000 intron (NM_001354155, intron 22 of 22) intron (NM_001354155, intron 22 of 22) 59719 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr2-14273 chr2 215394146 215394356 + 6.72 0.000 intron (NM_212482, intron 24 of 45) intron (NM_212482, intron 24 of 45) 41817 NM_001365519 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr11-9711 chr11 67999078 67999288 + 6.72 0.000 exon (NM_030930, exon 5 of 11) exon (NM_030930, exon 5 of 11) 4914 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr9-6229 chr9 120533546 120533756 + 6.72 0.000 intron (NR_073558, intron 7 of 37) AluSx1|SINE|Alu 46516 NM_001011649 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr1-11062 chr1 225594427 225594637 + 6.72 0.000 intron (NM_001008493, intron 1 of 14) intron (NM_001008493, intron 1 of 14) 58591 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr1-14022 chr1 26959477 26959687 + 6.72 0.000 intron (NM_152365, intron 1 of 3) CpG 886 NM_152365 126695 Hs.188881 NM_152365 ENSG00000175707 KDF1 C1orf172|ECTD12 keratinocyte differentiation factor 1 protein-coding chr14-1635 chr14 104650170 104650380 + 6.72 0.000 Intergenic CpG 15283 NR_135293 101929634 Hs.532502 NR_135293 ENSG00000260792 LINC02280 - long intergenic non-protein coding RNA 2280 ncRNA chr11-9109 chr11 32623145 32623355 + 6.72 0.000 intron (NM_001008391, intron 14 of 17) AluSq4|SINE|Alu 39419 NM_006360 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr22-2795 chr22 42514357 42514567 + 6.72 0.000 intron (NM_015703, intron 5 of 6) intron (NM_015703, intron 5 of 6) 5334 NM_015703 27341 Hs.745006 NM_015703 ENSG00000189306 RRP7A BK126B4.3|CGI-96|Rrp7 ribosomal RNA processing 7 homolog A protein-coding chr10-2255 chr10 103466805 103467015 + 6.72 0.000 Intergenic L2b|LINE|L2 -8019 NM_001001412 255022 Hs.680365 NM_001001412 ENSG00000185933 CALHM1 FAM26C calcium homeostasis modulator 1 protein-coding chr7-6265 chr7 135486571 135486781 + 6.72 0.000 intron (NM_013316, intron 1 of 10) L1MD2|LINE|L1 23426 NM_013316 4850 Hs.490224 NM_013316 ENSG00000080802 CNOT4 CLONE243|NOT4|NOT4H CCR4-NOT transcription complex subunit 4 protein-coding chr14-3343 chr14 89911261 89911471 + 6.72 0.000 intron (NM_001284269, intron 5 of 5) intron (NM_001284269, intron 5 of 5) 43170 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr2-7584 chr2 25315568 25315778 + 6.72 0.000 intron (NR_135490, intron 1 of 23) intron (NR_135490, intron 1 of 23) 13048 NR_031570 100302246 NR_031570 ENSG00000221445 MIR1301 MIRN1301|hsa-mir-1301|mir-1301 microRNA 1301 ncRNA chr1-14827 chr1 75195275 75195485 + 6.72 0.000 Intergenic Intergenic 60992 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr18-2391 chr18 272427 272637 + 6.72 0.000 Intergenic Intergenic -4485 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr6-8430 chr6 152122400 152122610 + 6.72 0.000 exon (NM_033071, exon 146 of 146) exon (NM_033071, exon 146 of 146) 45782 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr8-6647 chr8 78862847 78863057 + 6.72 0.000 Intergenic ERVL-E-int|LTR|ERVL 25423 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA chr17-6092 chr17 80771161 80771371 + 6.72 0.000 intron (NM_020761, intron 6 of 33) intron (NM_020761, intron 6 of 33) 34366 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr20-2665 chr20 44806241 44806451 + 6.72 0.000 intron (NM_001205317, intron 1 of 5) intron (NM_001205317, intron 1 of 5) 4200 NM_182970 140730 Hs.517065 NM_182970 ENSG00000101098 RIMS4 C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma regulating synaptic membrane exocytosis 4 protein-coding chr5-8911 chr5 157214380 157214590 + 6.72 0.000 intron (NM_005546, intron 4 of 16) intron (NM_005546, intron 4 of 16) 33589 NM_005546 3702 Hs.558348 NM_005546 ENSG00000113263 ITK EMT|LPFS1|LYK|PSCTK2 IL2 inducible T cell kinase protein-coding chr7-2212 chr7 114086141 114086351 + 6.72 0.000 promoter-TSS (NR_033766) promoter-TSS (NR_033766) -81 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr1-3536 chr1 211577728 211577938 + 6.72 0.000 intron (NM_021194, intron 1 of 1) CpG 1328 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr17-5435 chr17 39014521 39014731 + 6.72 0.000 Intergenic LTR8|LTR|ERV1 12484 NR_135645 105371766 Hs.311469 NR_135645 ENSG00000266013 LINC02079 - long intergenic non-protein coding RNA 2079 ncRNA chr14-4925 chr14 73825690 73825900 + 6.72 0.000 intron (NR_135238, intron 1 of 1) intron (NR_135238, intron 1 of 1) 4340 NR_135238 100506498 Hs.569330 NR_135238 ENSG00000258586 LINC02274 - long intergenic non-protein coding RNA 2274 ncRNA chr17-5845 chr17 67140822 67141032 + 6.72 0.000 intron (NM_001330447, intron 21 of 32) L1M4b|LINE|L1 96373 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr9-7212 chr9 137785203 137785413 + 6.72 0.000 TTS (NM_001145527) TTS (NM_001145527) 3098 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr7-4957 chr7 143364138 143364348 + 6.72 0.000 intron (NM_001371250, intron 1 of 6) intron (NM_001371250, intron 1 of 6) -1530 NM_001031690 9715 Hs.648908 NM_014690 ENSG00000159784 FAM131B - family with sequence similarity 131 member B protein-coding chr4-8725 chr4 183770198 183770408 + 6.72 0.000 Intergenic Intergenic -27719 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr21-1394 chr21 44087105 44087315 + 6.72 0.000 intron (NM_001351709, intron 9 of 15) intron (NM_001351709, intron 9 of 15) 12886 NM_001351709 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr11-6740 chr11 82610079 82610289 + 6.72 0.000 Intergenic Intergenic 123680 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr4-4840 chr4 109674471 109674681 + 6.72 0.000 intron (NM_017918, intron 4 of 7) intron (NM_017918, intron 4 of 7) 28869 NR_133012 839 Hs.654616 NM_001226 ENSG00000138794 CASP6 MCH2 caspase 6 protein-coding chr20-3150 chr20 37934371 37934581 + 6.72 0.000 intron (NM_080607, intron 3 of 3) intron (NM_080607, intron 3 of 3) 31349 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr19-6802 chr19 41771341 41771551 + 6.72 0.000 3' UTR (NM_002483, exon 6 of 6) 3' UTR (NM_002483, exon 6 of 6) 15916 NM_002483 4680 Hs.466814 NM_002483 ENSG00000086548 CEACAM6 CD66c|CEAL|NCA carcinoembryonic antigen related cell adhesion molecule 6 protein-coding chr20-3067 chr20 7790275 7790485 + 6.72 0.000 Intergenic L1MC4|LINE|L1 150078 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chrX-2075 chrX 20549226 20549436 + 6.72 0.000 Intergenic Intergenic -282422 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr1-14474 chr1 47934269 47934479 + 6.72 0.000 intron (NM_001194986, intron 2 of 6) intron (NM_001194986, intron 2 of 6) 63011 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr6-8537 chr6 160805696 160805906 + 6.72 0.000 Intergenic Intergenic 103608 NM_000301 5340 Hs.143436 NM_000301 ENSG00000122194 PLG - plasminogen protein-coding chr1-7735 chr1 31199799 31200009 + 6.72 0.000 intron (NM_024522, intron 1 of 6) intron (NM_024522, intron 1 of 6) 39983 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr2-14729 chr2 238934291 238934501 + 6.72 0.000 Intergenic L1MD1|LINE|L1 -8127 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr1-12238 chr1 215197858 215198068 + 6.72 0.000 intron (NM_001017424, intron 6 of 6) AluSx1|SINE|Alu 115226 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr13-2076 chr13 64877119 64877329 + 6.72 0.000 Intergenic MER6|DNA|TcMar-Tigger -801213 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr6-8205 chr6 134983038 134983248 + 6.72 0.000 intron (NM_006620, intron 12 of 17) intron (NM_006620, intron 12 of 17) -3711 NR_037435 100500880 NR_037435 ENSG00000283409 MIR3662 mir-3662 microRNA 3662 ncRNA chr12-8258 chr12 124794848 124795058 + 6.72 0.000 intron (NM_001367987, intron 7 of 9) AluSp|SINE|Alu 44718 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr8-3661 chr8 13588752 13588962 + 6.72 0.000 intron (NM_001348082, intron 1 of 16) intron (NM_001348082, intron 1 of 16) 15763 NM_001348081 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr7-4128 chr7 55683761 55683971 + 6.72 0.000 intron (NR_003949, intron 5 of 5) L2a|LINE|L2 4166 NR_027340 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr9-8840 chr9 135537609 135537819 + 6.72 0.000 Intergenic L1MB7|LINE|L1 -8412 NR_120603 29991 Hs.567489 NM_014582 ENSG00000122136 OBP2A LCN13|OBP|OBP2C|OBPIIa|hOBPIIa odorant binding protein 2A protein-coding chr2-9820 chr2 148300780 148300990 + 6.72 0.000 intron (NM_018328, intron 4 of 14) MLT1N2|LTR|ERVL-MaLR -279281 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr15-2330 chr15 93415855 93416065 + 6.72 0.000 Intergenic Intergenic 209894 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr9-3107 chr9 39021108 39021318 + 6.72 0.000 Intergenic AluY|SINE|Alu 267090 NM_033655 79937 Hs.128474 NM_033655 ENSG00000106714 CNTNAP3 CASPR3|CNTNAP3A contactin associated protein like 3 protein-coding chr6-6227 chr6 19669425 19669635 + 6.72 0.000 Intergenic Intergenic 135229 NR_134651 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr1-12890 chr1 110566588 110566798 + 6.72 0.000 Intergenic MIRb|SINE|MIR 39665 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr6-7195 chr6 39048354 39048564 + 6.72 0.000 promoter-TSS (NM_002062) promoter-TSS (NM_002062) -322 NR_136563 2740 Hs.351883 NM_002062 ENSG00000112164 GLP1R GLP-1|GLP-1-R|GLP-1R glucagon like peptide 1 receptor protein-coding chr5-8882 chr5 154923449 154923659 + 6.72 0.000 intron (NM_015465, intron 9 of 27) MER58B|DNA|hAT-Charlie 14657 NM_015465 25929 Hs.483921 NM_015465 ENSG00000082516 GEMIN5 GEMIN-5 gem nuclear organelle associated protein 5 protein-coding chr2-7373 chr2 3211579 3211789 + 6.72 0.000 intron (NM_003310, intron 5 of 8) intron (NM_003310, intron 5 of 8) -85658 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr10-8888 chr10 113786332 113786542 + 6.72 0.000 Intergenic Intergenic -8383 NR_039703 100616162 NR_039703 ENSG00000283656 MIR4483 - microRNA 4483 ncRNA chr6-7639 chr6 80226229 80226439 + 6.72 0.000 intron (NR_134945, intron 9 of 10) intron (NR_134945, intron 9 of 10) 119663 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr3-6718 chr3 135165350 135165560 + 6.72 0.000 intron (NM_004441, intron 7 of 15) intron (NM_004441, intron 7 of 15) 370195 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr6-3460 chr6 163680481 163680691 + 6.72 0.000 Intergenic Intergenic -9102 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr5-5794 chr5 175339533 175339743 + 6.72 0.000 Intergenic Intergenic 104544 NM_000794 1812 Hs.2624 NM_000794 ENSG00000184845 DRD1 DADR|DRD1A dopamine receptor D1 protein-coding chr5-7775 chr5 62922138 62922348 + 6.72 0.000 Intergenic Intergenic 343424 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr1-9808 chr1 59141495 59141705 + 6.72 0.000 intron (NR_027120, intron 1 of 2) intron (NR_027120, intron 1 of 2) 5207 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr6-6353 chr6 57277044 57277254 + 6.72 0.000 Intergenic Intergenic -13803 NR_109774 100506188 Hs.485640 NR_109774 LOC100506188 - uncharacterized LOC100506188 ncRNA chr18-2790 chr18 3024767 3024977 + 6.72 0.000 Intergenic AluSz6|SINE|Alu -12925 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr12-7443 chr12 61991886 61992096 + 6.72 0.000 intron (NM_178539, intron 1 of 4) L2a|LINE|L2 200848 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr11-7804 chr11 101810611 101810821 + 6.72 0.000 Intergenic Intergenic -104294 NM_001363543 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr8-5541 chr8 70663175 70663385 + 6.72 0.000 TTS (NR_038881) TTS (NR_038881) 5905 NM_016027 51110 Hs.118554 NM_016027 ENSG00000147592 LACTB2 CGI-83 lactamase beta 2 protein-coding chr11-4857 chr11 29208170 29208380 + 6.72 0.000 Intergenic Intergenic -386138 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chrX-1188 chrX 57991211 57991421 + 6.72 0.000 Intergenic L1M2a|LINE|L1 -80683 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chrX-4175 chrX 33131852 33132062 + 6.72 0.000 intron (NM_000109, intron 1 of 78) intron (NM_000109, intron 1 of 78) -3529 NM_004009 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr17-6575 chr17 47995672 47995882 + 6.72 0.000 Intergenic MIR|SINE|MIR 24664 NM_176096 80279 Hs.20157 NM_025197 ENSG00000108465 CDK5RAP3 C53|HSF-27|IC53|LZAP|MST016|OK/SW-cl.114|PP1553 CDK5 regulatory subunit associated protein 3 protein-coding chr14-5377 chr14 103889526 103889736 + 6.72 0.000 Intergenic Intergenic 31898 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr16-3312 chr16 162596 162806 + 6.72 0.000 Intergenic Intergenic -3277 NM_001003938 3042 Hs.647389 NM_001003938 ENSG00000206177 HBM HBAP2|HBK hemoglobin subunit mu protein-coding chr5-7766 chr5 61654676 61654886 + 6.72 0.000 intron (NR_126524, intron 2 of 3) LTR33A|LTR|ERVL 17000 NR_126525 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr1-10096 chr1 96059597 96059807 + 6.72 0.000 Intergenic Intergenic 67634 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr1-15979 chr1 194738926 194739136 + 6.72 0.000 Intergenic L1PA5|LINE|L1 1349684 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr1-13066 chr1 177280829 177281039 + 6.72 0.000 exon (NM_021165, exon 8 of 8) exon (NM_021165, exon 8 of 8) -70652 NR_126001 102724661 Hs.146628 NR_126001 LINC01645 - long intergenic non-protein coding RNA 1645 ncRNA chr11-10542 chr11 120506529 120506739 + 6.72 0.000 Intergenic Intergenic -5112 NM_014619 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr10-3470 chr10 60883170 60883380 + 6.72 0.000 intron (NM_001350906, intron 9 of 12) intron (NM_001350906, intron 9 of 12) 60910 NM_014836 9886 Hs.737374 NM_014836 ENSG00000072422 RHOBTB1 - Rho related BTB domain containing 1 protein-coding chr7-6722 chr7 4392584 4392794 + 6.72 0.000 Intergenic AluSz6|SINE|Alu -257852 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr1-6084 chr1 110049827 110050037 + 6.72 0.000 intron (NR_073071, intron 18 of 21) intron (NR_073071, intron 18 of 21) 15308 NM_033088 85369 Hs.584996 NM_033088 ENSG00000143093 STRIP1 FAM40A|FAR11A striatin interacting protein 1 protein-coding chr4-8491 chr4 159640226 159640436 + 6.72 0.000 Intergenic MIR|SINE|MIR 137453 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr2-9977 chr2 10498940 10499150 + 6.72 0.000 Intergenic MER91A|DNA|hAT-Tip100 49317 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr6-2854 chr6 2854100 2854310 + 6.72 0.000 promoter-TSS (NR_039788) promoter-TSS (NR_039788) -98 NR_039788 100616285 NR_039788 ENSG00000266750 MIR4645 mir-4645 microRNA 4645 ncRNA chr3-7374 chr3 64700685 64700895 + 6.72 0.000 intron (NR_038264, intron 1 of 5) MER5A|DNA|hAT-Charlie -12790 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr9-2250 chr9 78314676 78314886 + 6.72 0.000 intron (NM_021154, intron 6 of 7) intron (NM_021154, intron 6 of 7) 17656 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr21-1846 chr21 41715028 41715238 + 6.72 0.000 non-coding (NR_027272, exon 2 of 6) non-coding (NR_027272, exon 2 of 6) 642 NR_027272 150135 Hs.350679 NM_152506 ENSG00000236384 LINC00479 C21orf129|PRED76 long intergenic non-protein coding RNA 479 ncRNA chr2-13441 chr2 143564488 143564698 + 6.72 0.000 intron (NM_018460, intron 11 of 13) intron (NM_018460, intron 11 of 13) -372474 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr3-11127 chr3 187210493 187210703 + 6.72 0.000 Intergenic Intergenic -2969 NR_110052 101929106 Hs.640145 NR_110052 ENSG00000198491 LOC101929106 - uncharacterized LOC101929106 ncRNA chr9-8195 chr9 107918810 107919020 + 6.72 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -429146 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr3-10783 chr3 158860387 158860597 + 6.72 0.000 Intergenic Intergenic 58438 NR_110328 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr2-5548 chr2 163993748 163993958 + 6.72 0.000 Intergenic Intergenic -257845 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr18-841 chr18 13628048 13628258 + 6.72 0.000 intron (NM_001003675, intron 2 of 2) intron (NM_001003675, intron 2 of 2) -13605 NM_001276251 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr10-2590 chr10 73823731 73823941 + 6.72 0.000 intron (NM_001367536, intron 16 of 20) MIRb|SINE|MIR -12016 NR_160744 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr20-2215 chr20 61375247 61375457 + 6.72 0.000 intron (NM_001794, intron 2 of 15) (GTG)n|Simple_repeat|Simple_repeat 123091 NM_001794 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr2-12472 chr2 61117797 61118007 + 6.72 0.000 intron (NM_001129993, intron 19 of 21) intron (NM_001129993, intron 19 of 21) 27073 NR_036496 339803 Hs.252433 NR_036496 ENSG00000212978 LOC339803 - uncharacterized LOC339803 ncRNA chr6-2573 chr6 49018780 49018990 + 6.72 0.000 Intergenic Intergenic 444368 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr10-7573 chr10 17869418 17869628 + 6.72 0.000 intron (NM_002438, intron 12 of 29) intron (NM_002438, intron 12 of 29) 24416 NR_030167 574445 NR_030167 ENSG00000207938 MIR511 MIR511-1|MIR511-2|MIRN511-1|MIRN511-2|hsa-mir-511|hsa-mir-511-2|mir-511 microRNA 511 ncRNA chr3-10902 chr3 171387245 171387455 + 6.72 0.000 intron (NM_001161563, intron 1 of 31) intron (NM_001161563, intron 1 of 31) 73055 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr21-1739 chr21 34604793 34605003 + 6.72 0.000 intron (NM_004414, intron 1 of 3) MIRb|SINE|MIR 8945 NM_001285389 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr3-4274 chr3 152277291 152277501 + 6.72 0.000 intron (NM_001314057, intron 1 of 11) intron (NM_001314057, intron 1 of 11) -7770 NR_027037 401093 Hs.725347 NR_027037 ENSG00000229619 MBNL1-AS1 - MBNL1 antisense RNA 1 ncRNA chr20-1304 chr20 57707566 57707776 + 6.72 0.000 intron (NM_199171, intron 1 of 3) intron (NM_199171, intron 1 of 3) 2344 NM_020182 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr5-8769 chr5 148029255 148029465 + 6.72 0.000 Intergenic L1MEg2|LINE|L1 -34612 NM_006846 11005 Hs.331555 NM_006846 ENSG00000133710 SPINK5 LEKTI|LETKI|NETS|NS|VAKTI serine peptidase inhibitor, Kazal type 5 protein-coding chr7-9721 chr7 156831576 156831786 + 6.72 0.000 intron (NR_146958, intron 3 of 14) intron (NR_146958, intron 3 of 14) 61502 NM_001363409 64327 Hs.209989 NM_022458 ENSG00000105983 LMBR1 ACHP|C7orf2|DIF14|LSS|PPD2|THYP|TPT|ZRS limb development membrane protein 1 protein-coding chr5-4530 chr5 15560219 15560429 + 6.72 0.000 intron (NM_001278317, intron 1 of 3) intron (NM_001278317, intron 1 of 3) 54678 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr1-6560 chr1 31506024 31506234 + 6.72 0.000 intron (NR_034112, intron 5 of 7) intron (NR_034112, intron 5 of 7) 6044 NR_034112 149086 Hs.729905 NR_034112 ENSG00000260386 LDC1P LINC01225 leucine decarboxylase 1, pseudogene pseudo chr18-2533 chr18 78402101 78402311 + 6.72 0.000 Intergenic Intergenic -408479 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr6-6234 chr6 23477094 23477304 + 6.72 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -649016 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr17-7364 chr17 7092662 7092872 + 6.72 0.000 Intergenic (AAAT)n|Simple_repeat|Simple_repeat -12516 NM_006344 10462 Hs.54403 NM_006344 ENSG00000132514 CLEC10A CD301|CLECSF13|CLECSF14|HML|HML2|MGL C-type lectin domain containing 10A protein-coding chr10-8367 chr10 80590141 80590351 + 6.72 0.000 intron (NM_207372, intron 4 of 6) MER74A|LTR|ERVL 49427 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr22-3747 chr22 26681427 26681637 + 6.72 0.000 intron (NR_110543, intron 1 of 5) intron (NR_110543, intron 1 of 5) 8689 NR_110543 102724827 Hs.642767 NR_110543 MIATNB - MIAT neighbor ncRNA chr19-6642 chr19 32993167 32993377 + 6.72 0.000 intron (NM_033103, intron 12 of 14) AluSz|SINE|Alu 21030 NM_001300978 91442 Hs.579899 NM_152266 ENSG00000131944 FAAP24 C19orf40 FA core complex associated protein 24 protein-coding chr3-9003 chr3 18301001 18301211 + 6.72 0.000 Intergenic L1MA4A|LINE|L1 124233 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr15-2780 chr15 33743835 33744045 + 6.72 0.000 intron (NM_001243996, intron 52 of 102) L2a|LINE|L2 -224557 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr4-6708 chr4 3679346 3679556 + 6.72 0.000 Intergenic Intergenic -1596 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr9-3343 chr9 104903635 104903845 + 6.72 0.000 5' UTR (NM_005502, exon 2 of 50) 5' UTR (NM_005502, exon 2 of 50) 24415 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr19-3716 chr19 41115953 41116163 + 6.72 0.000 intron (NR_135528, intron 1 of 9) (TCCC)n|Simple_repeat|Simple_repeat 1626 NR_135528 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr10-5757 chr10 103315059 103315269 + 6.72 0.000 intron (NM_001011663, intron 8 of 9) intron (NM_001011663, intron 8 of 9) 35976 NM_032154 84108 Hs.335808 NM_032154 ENSG00000156374 PCGF6 MBLR|RNF134 polycomb group ring finger 6 protein-coding chrX-2771 chrX 130608181 130608391 + 6.72 0.000 Intergenic L2a|LINE|L2 113345 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr2-8067 chr2 73284401 73284611 + 6.72 0.000 promoter-TSS (NM_001080410) promoter-TSS (NM_001080410) -28 NM_001080410 150726 Hs.23158 NM_001080410 ENSG00000163013 FBXO41 FBX41 F-box protein 41 protein-coding chr20-1946 chr20 25286808 25287018 + 6.72 0.000 intron (NM_002862, intron 14 of 19) intron (NM_002862, intron 14 of 19) 38828 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr19-2859 chr19 10517434 10517644 + 6.72 0.000 promoter-TSS (NM_030760) promoter-TSS (NM_030760) -92 NM_030760 53637 Hs.501561 NM_030760 ENSG00000180739 S1PR5 EDG8|Edg-8|S1P5|SPPR-1|SPPR-2 sphingosine-1-phosphate receptor 5 protein-coding chr1-15341 chr1 119987134 119987344 + 6.72 0.000 intron (NM_001200001, intron 4 of 21) intron (NM_001200001, intron 4 of 21) 82423 NM_024408 4853 Hs.487360 NM_024408 ENSG00000134250 NOTCH2 AGS2|HJCYS|hN2 notch receptor 2 protein-coding chr5-2641 chr5 89533 89743 + 6.72 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -2530 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr15-2797 chr15 36334147 36334357 + 6.72 0.000 Intergenic Intergenic -245374 NM_001321759 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr5-6564 chr5 16970839 16971049 + 6.72 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -34656 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr7-9716 chr7 156539941 156540151 + 6.72 0.000 promoter-TSS (NR_024119) promoter-TSS (NR_024119) -445 NR_024119 64433 Hs.404170 NR_024119 ENSG00000279418 LINC00244 C7orf4|NCRNA00244 long intergenic non-protein coding RNA 244 ncRNA chr12-7985 chr12 111221210 111221420 + 6.72 0.000 intron (NM_015267, intron 3 of 21) intron (NM_015267, intron 3 of 21) -82827 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr3-10383 chr3 128957730 128957940 + 6.72 0.000 intron (NM_001348520, intron 8 of 14) MLT1C|LTR|ERVL-MaLR 34062 NM_001348523 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr11-10321 chr11 109202831 109203041 + 6.72 0.000 Intergenic Intergenic -219254 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr11-6871 chr11 101748808 101749018 + 6.72 0.000 Intergenic Intergenic -164906 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr18-2426 chr18 22767831 22768041 + 6.72 0.000 intron (NR_110782, intron 1 of 1) L2c|LINE|L2 18901 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr5-7375 chr5 20257538 20257748 + 6.72 0.000 intron (NM_001349556, intron 1 of 13) intron (NM_001349556, intron 1 of 13) -47908 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA chrX-1742 chrX 41664265 41664475 + 6.72 0.000 intron (NM_003688, intron 7 of 26) intron (NM_003688, intron 7 of 26) -24603 NM_005300 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr11-4075 chr11 21626261 21626471 + 6.72 0.000 Intergenic Intergenic -566719 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr9-5186 chr9 71108202 71108412 + 6.72 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) 13314 NM_001366148 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr9-4455 chr9 22595534 22595744 + 6.72 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -50561 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr13-2956 chr13 46094553 46094763 + 6.72 0.000 intron (NM_001872, intron 1 of 10) ERV3-16A3_I-int|LTR|ERVL 10375 NM_001872 1361 Hs.512937 NM_001872 ENSG00000080618 CPB2 CPU|PCPB|TAFI carboxypeptidase B2 protein-coding chrX-2157 chrX 36278132 36278342 + 6.72 0.000 intron (NM_001304548, intron 49 of 63) L1P2|LINE|L1 162055 NR_110412 101928627 Hs.590831 NR_110412 ENSG00000226484 LOC101928627 - uncharacterized LOC101928627 ncRNA chr1-12399 chr1 9448606 9448816 + 6.72 0.000 Intergenic Intergenic -19715 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr1-15028 chr1 93249101 93249311 + 6.72 0.000 intron (NM_001306076, intron 23 of 28) L1M1|LINE|L1 68490 NM_206886 343099 Hs.482873 NM_206886 ENSG00000122483 CCDC18 NY-SAR-41 coiled-coil domain containing 18 protein-coding chr7-7728 chr7 604645 604855 + 6.72 0.000 intron (NR_110055, intron 1 of 1) CpG 1352 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr17-6465 chr17 16686247 16686457 + 6.72 0.000 Intergenic Intergenic -3889 NM_014695 9720 Hs.745246 NM_014695 ENSG00000170160 CCDC144A - coiled-coil domain containing 144A protein-coding chr20-3303 chr20 11810089 11810299 + 6.72 0.000 non-coding (NR_110635, exon 2 of 2) non-coding (NR_110635, exon 2 of 2) 60521 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr17-6845 chr17 18032401 18032611 + 6.72 0.000 intron (NM_145691, intron 1 of 7) intron (NM_145691, intron 1 of 7) 6662 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr4-6196 chr4 48518113 48518323 + 6.72 0.000 intron (NM_015030, intron 55 of 63) intron (NM_015030, intron 55 of 63) 27966 NM_175619 326340 Hs.276457 NM_175619 ENSG00000182223 ZAR1 Z3CXXC6 zygote arrest 1 protein-coding chr14-4706 chr14 58549287 58549497 + 6.72 0.000 TTS (NM_001244191) TTS (NM_001244191) -84676 NR_046093 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr14-3672 chr14 96363507 96363717 + 6.72 0.000 promoter-TSS (NM_018036) promoter-TSS (NM_018036) 86 NM_016472 51527 Hs.4104 NM_016472 ENSG00000100744 GSKIP C14orf129|HSPC210 GSK3B interacting protein protein-coding chr11-7883 chr11 123834234 123834444 + 6.72 0.000 Intergenic L1PB1|LINE|L1 -27990 NM_001005325 390261 Hs.557924 NM_001005325 ENSG00000196099 OR6M1 OR11-271 olfactory receptor family 6 subfamily M member 1 protein-coding chrX-1639 chrX 126182123 126182333 + 6.72 0.000 Intergenic L1MA5|LINE|L1 -15939 NM_001013628 340578 Hs.181867 NM_001013628 ENSG00000198354 DCAF12L2 WDR40C DDB1 and CUL4 associated factor 12 like 2 protein-coding chr15-3176 chr15 69390667 69390877 + 6.72 0.000 intron (NM_001104554, intron 6 of 8) Chap1_Mam|DNA|hAT-Charlie -23577 NM_138555 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr4-3429 chr4 78551706 78551916 + 6.72 0.000 promoter-TSS (NM_005139) promoter-TSS (NM_005139) 41 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr9-3724 chr9 114611369 114611579 + 6.72 0.000 5' UTR (NM_001330760, exon 1 of 9) 5' UTR (NM_001330760, exon 1 of 9) 183 NM_001330760 203197 Hs.522357 NM_153045 ENSG00000157693 TMEM268 C9orf91 transmembrane protein 268 protein-coding chr6-6298 chr6 41605833 41606043 + 6.72 0.000 Intergenic Intergenic 7215 NR_039784 100616178 NR_039784 ENSG00000266494 MIR4641 - microRNA 4641 ncRNA chr17-6553 chr17 41793198 41793408 + 6.72 0.000 Intergenic Intergenic -6535 NM_001352776 3728 Hs.514174 NM_002230 ENSG00000173801 JUP CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr7-5909 chr7 97194484 97194694 + 6.72 0.000 Intergenic L1PA7|LINE|L1 77996 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr1-8873 chr1 4105001 4105211 + 6.72 0.000 Intergenic Intergenic -156126 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr3-5071 chr3 42932401 42932611 + 6.72 0.000 Intergenic L1MEf|LINE|L1 -3836 NM_001205272 100506243 Hs.720172 NM_015673 ENSG00000240747 KRBOX1 - KRAB box domain containing 1 protein-coding chr20-2313 chr20 7112468 7112678 + 6.72 0.000 Intergenic Intergenic 141629 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA chr22-2601 chr22 31282967 31283177 + 6.72 0.000 3' UTR (NM_052880, exon 6 of 6) 3' UTR (NM_052880, exon 6 of 6) 9416 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr5-4477 chr5 8357303 8357513 + 6.72 0.000 intron (NR_039984, intron 3 of 5) intron (NR_039984, intron 3 of 5) 100156 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr18-3246 chr18 49113428 49113638 + 6.72 0.000 intron (NM_001353215, intron 15 of 16) intron (NM_001353215, intron 15 of 16) -63765 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr11-3757 chr11 46280014 46280224 + 6.72 0.000 intron (NM_052854, intron 1 of 11) MIR1_Amn|SINE|MIR 2457 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr14-3003 chr14 53327133 53327343 + 6.72 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 173884 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr4-6119 chr4 20124170 20124380 + 6.72 0.000 Intergenic L2|LINE|L2 -127630 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr8-6181 chr8 33801551 33801761 + 6.72 0.000 Intergenic Intergenic -201550 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr8-2684 chr8 91228209 91228419 + 6.72 0.000 intron (NM_001282357, intron 2 of 18) intron (NM_001282357, intron 2 of 18) 18818 NM_001282357 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chrX-2697 chrX 119642011 119642221 + 6.72 0.000 intron (NM_145799, intron 5 of 10) AluSg4|SINE|Alu 4732 NR_030413 768218 NR_030413 ENSG00000211578 MIR766 MIRN766|hsa-mir-766|mir-766 microRNA 766 ncRNA chr1-10657 chr1 183019851 183020061 + 6.72 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -3464 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr10-4976 chr10 30359804 30360014 + 6.72 0.000 Intergenic Intergenic 8756 NR_106985 102466227 NR_106985 ENSG00000284277 MIR7162 hsa-mir-7162 microRNA 7162 ncRNA chrX-3843 chrX 153042629 153042839 + 6.72 0.000 Intergenic MLT2D|LTR|ERVL -13736 NM_013364 29944 Hs.449627 NM_013364 ENSG00000183837 PNMA3 MA3|MA5 PNMA family member 3 protein-coding chr3-4988 chr3 17724019 17724229 + 6.72 0.000 intron (NM_001349076, intron 1 of 22) AluJo|SINE|Alu 16783 NM_014744 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr5-8009 chr5 87347242 87347452 + 6.72 0.000 intron (NM_022650, intron 7 of 24) intron (NM_022650, intron 7 of 24) -23719 NR_130929 644285 Hs.709256 NR_130929 LOC644285 - uncharacterized LOC644285 ncRNA chr11-8778 chr11 10121349 10121559 + 6.72 0.000 intron (NM_030962, intron 2 of 39) intron (NM_030962, intron 2 of 39) 172753 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chrX-4301 chrX 43594145 43594355 + 6.72 0.000 Intergenic L2a|LINE|L2 -60657 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr22-2039 chr22 41708199 41708409 + 6.72 0.000 intron (NM_152513, intron 3 of 30) ERVL-E-int|LTR|ERVL 8801 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr12-6916 chr12 24227051 24227261 + 6.72 0.000 intron (NR_120472, intron 1 of 4) intron (NR_120472, intron 1 of 4) 3885 NR_120472 101928471 Hs.569156 NR_120472 ENSG00000256120 SOX5-AS1 - SOX5 antisense RNA 1 ncRNA chr10-7991 chr10 60530439 60530649 + 6.72 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 42412 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr13-4302 chr13 99830171 99830381 + 6.72 0.000 intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) -101275 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr1-16098 chr1 203506732 203506942 + 6.72 0.000 intron (NM_014359, intron 7 of 7) MIRb|SINE|MIR 12684 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr18-2116 chr18 52217944 52218154 + 6.72 0.000 Intergenic L2a|LINE|L2 -122148 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr7-4574 chr7 6897133 6897343 + 6.72 0.000 Intergenic Intergenic -70943 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr2-6339 chr2 82819669 82819879 + 6.72 0.000 Intergenic Intergenic -37029 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr8-6255 chr8 41073000 41073210 + 6.72 0.000 Intergenic MER4E1|LTR|ERV1 -175279 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr6-1559 chr6 160520022 160520232 + 6.72 0.000 Intergenic Intergenic -9003 NR_028092 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr11-4105 chr11 34344894 34345104 + 6.72 0.000 intron (NM_145804, intron 1 of 16) L2a|LINE|L2 13011 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr6-6211 chr6 16135216 16135426 + 6.72 0.000 intron (NM_013262, intron 2 of 6) intron (NM_013262, intron 2 of 6) 6235 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr10-7842 chr10 45119080 45119290 + 6.72 0.000 intron (NR_024472, intron 5 of 8) MIR3|SINE|MIR 35411 NR_024472 100133308 Hs.434365 NR_024472 RSU1P2 - Ras suppressor protein 1 pseudogene 2 pseudo chr15-2222 chr15 94346593 94346803 + 6.72 0.000 intron (NM_018349, intron 7 of 21) intron (NM_018349, intron 7 of 21) -9232 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr1-15185 chr1 109640204 109640414 + 6.72 0.000 Intergenic MER91A|DNA|hAT-Tip100 -15767 NR_024538 2948 Hs.348387 NM_000850 ENSG00000168765 GSTM4 GSTM4-4|GTM4 glutathione S-transferase mu 4 protein-coding chr11-7110 chr11 123261487 123261697 + 6.72 0.000 Intergenic Intergenic -66344 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr18-1631 chr18 52081805 52082015 + 6.72 0.000 Intergenic L1M1|LINE|L1 -258287 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr3-10279 chr3 124933075 124933285 + 6.72 0.000 intron (NM_033049, intron 1 of 11) intron (NM_033049, intron 1 of 11) 1571 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr12-8312 chr12 129168802 129169012 + 6.72 0.000 intron (NM_133448, intron 5 of 8) MIR3|SINE|MIR -39694 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chrX-4233 chrX 38768124 38768334 + 6.72 0.000 Intergenic Intergenic -33203 NM_021242 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr5-3778 chr5 66863247 66863457 + 6.72 0.000 intron (NM_015183, intron 1 of 27) intron (NM_015183, intron 1 of 27) 34579 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr6-7191 chr6 38946329 38946539 + 6.72 0.000 intron (NM_001371, intron 79 of 91) MamSINE1|SINE|tRNA-RTE 6673 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr3-7512 chr3 171348168 171348378 + 6.72 0.000 intron (NR_027767, intron 2 of 2) intron (NR_027767, intron 2 of 2) 112132 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr9-7381 chr9 18137815 18138025 + 6.72 0.000 Intergenic Intergenic -336233 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr7-9288 chr7 126149385 126149595 + 6.72 0.000 Intergenic Intergenic -885199 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr15-4834 chr15 73738839 73739049 + 6.72 0.000 3' UTR (NM_001303254, exon 3 of 3) 3' UTR (NM_001303254, exon 3 of 3) 12531 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr14-3037 chr14 58072673 58072883 + 6.72 0.000 intron (NM_001001872, intron 5 of 7) intron (NM_001001872, intron 5 of 7) 79435 NM_001001872 145407 Hs.26766 NM_001001872 ENSG00000139971 ARMH4 C14orf37|UT2|c14_5376 armadillo like helical domain containing 4 protein-coding chr6-6120 chr6 157563582 157563792 + 6.72 0.000 intron (NM_024630, intron 2 of 8) intron (NM_024630, intron 2 of 8) 34555 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr15-4507 chr15 52171680 52171890 + 6.72 0.000 intron (NM_006578, intron 1 of 10) intron (NM_006578, intron 1 of 10) 8140 NM_006578 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr10-4363 chr10 34696604 34696814 + 6.72 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 118587 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr1-12640 chr1 41946585 41946795 + 6.72 0.000 intron (NR_038261, intron 1 of 3) HERV17-int|LTR|ERV1 -27768 NM_001127714 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr16-5947 chr16 3905910 3906120 + 6.72 0.000 Intergenic L1MB3|LINE|L1 -25302 NM_004380 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr20-1581 chr20 3703383 3703593 + 6.72 0.000 intron (NM_023068, intron 5 of 21) intron (NM_023068, intron 5 of 21) 3746 NM_001367089 6614 Hs.31869 NM_023068 ENSG00000088827 SIGLEC1 CD169|SIGLEC-1|SN sialic acid binding Ig like lectin 1 protein-coding chr2-11798 chr2 16606129 16606339 + 6.72 0.000 intron (NM_030797, intron 2 of 11) intron (NM_030797, intron 2 of 11) 59600 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr4-8220 chr4 136911995 136912205 + 6.72 0.000 intron (NR_149105, intron 3 of 3) MER34D|LTR|ERV1 -281656 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr15-3628 chr15 77745807 77746017 + 6.72 0.000 intron (NM_001301186, intron 2 of 5) intron (NM_001301186, intron 2 of 5) -25161 NM_001301197 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr10-4628 chr10 122034301 122034511 + 6.72 0.000 intron (NM_206862, intron 2 of 22) MIRb|SINE|MIR 45243 NM_206862 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr3-7717 chr3 49952332 49952542 + 6.72 0.000 intron (NM_001349194, intron 1 of 17) AluSz|SINE|Alu 12287 NM_001349190 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr1-14807 chr1 72105381 72105591 + 6.72 0.000 intron (NM_173808, intron 1 of 6) AluJo|SINE|Alu 177053 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr2-11836 chr2 19382310 19382520 + 6.72 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -23792 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr4-4256 chr4 19891231 19891441 + 6.72 0.000 Intergenic HERVH48-int|LTR|ERV1 -360569 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr15-4808 chr15 72858011 72858221 + 6.72 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -74358 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chrX-1958 chrX 8838919 8839129 + 6.72 0.000 Intergenic Charlie29a|DNA|hAT-Charlie -37641 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr3-4450 chr3 34886667 34886877 + 6.72 0.000 intron (NR_110817, intron 2 of 3) MLT1A1-int|LTR|ERVL-MaLR 507251 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr13-769 chr13 20704088 20704298 + 6.72 0.000 exon (NM_138284, exon 2 of 3) exon (NM_138284, exon 2 of 3) 850 NM_138284 53342 Hs.655142 NM_138284 ENSG00000172458 IL17D IL-17D interleukin 17D protein-coding chr5-6401 chr5 147234583 147234793 + 6.72 0.000 promoter-TSS (NM_145001) promoter-TSS (NM_145001) 171 NR_147190 105378217 Hs.162649 NR_147190 STK32A-AS1 - STK32A antisense RNA 1 ncRNA chr1-12160 chr1 180485282 180485492 + 6.72 0.000 intron (NM_032360, intron 3 of 7) MLT1C|LTR|ERVL-MaLR 17190 NM_032360 84320 Hs.200051 NM_032360 ENSG00000230124 ACBD6 - acyl-CoA binding domain containing 6 protein-coding chr20-2029 chr20 63785092 63785302 + 6.72 0.000 intron (NM_001369741, intron 2 of 4) AluSc|SINE|Alu 20306 NM_025224 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr5-7535 chr5 37918585 37918795 + 6.72 0.000 Intergenic Intergenic -29801 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA chr1-12346 chr1 2059443 2059653 + 6.72 0.000 exon (NM_002744, exon 4 of 18) exon (NM_002744, exon 4 of 18) 9137 NM_002744 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr20-3804 chr20 23150513 23150723 + 6.72 0.000 Intergenic Intergenic -17982 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr2-7337 chr2 241743915 241744125 + 6.72 0.000 intron (NR_109778, intron 5 of 7) intron (NR_109778, intron 5 of 7) 9390 NR_109778 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr10-5538 chr10 85987246 85987456 + 6.72 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 277437 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr18-3303 chr18 54457183 54457393 + 6.72 0.000 Intergenic Intergenic 99371 NR_110234 162681 Hs.208701 NM_173529 ENSG00000166845 C18orf54 LAS2 chromosome 18 open reading frame 54 protein-coding chr18-3176 chr18 43661739 43661949 + 6.72 0.000 Intergenic ERV24_Prim-int|LTR|ERV1 -384354 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr19-5265 chr19 48545093 48545303 + 6.72 0.000 Intergenic Intergenic -6974 NM_177973 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr8-3168 chr8 95224184 95224394 + 6.72 0.000 Intergenic Intergenic -7915 NR_046232 619344 Hs.741630 NR_046232 ENSG00000253351 LINC01298 C8orf69 long intergenic non-protein coding RNA 1298 ncRNA chr6-6903 chr6 13048188 13048398 + 6.72 0.000 intron (NM_001322314, intron 1 of 12) intron (NM_001322314, intron 1 of 12) 34739 NM_001322314 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr9-3782 chr9 126507255 126507465 + 6.72 0.000 TTS (NM_033446) TTS (NM_033446) -96856 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr1-15568 chr1 159183441 159183651 + 6.72 0.000 intron (NM_001127173, intron 1 of 8) intron (NM_001127173, intron 1 of 8) 11931 NM_021189 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr6-7180 chr6 38193696 38193906 + 6.72 0.000 intron (NM_052893, intron 10 of 11) intron (NM_052893, intron 10 of 11) -287795 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr13-4285 chr13 98525643 98525853 + 6.72 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) -3623 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr5-3494 chr5 173328037 173328247 + 6.72 0.000 exon (NM_003714, exon 1 of 4) exon (NM_003714, exon 1 of 4) 1361 NM_003714 8614 Hs.233160 NM_003714 ENSG00000113739 STC2 STC-2|STCRP stanniocalcin 2 protein-coding chr6-2696 chr6 35407147 35407357 + 6.72 0.000 intron (NM_001171818, intron 3 of 8) intron (NM_001171818, intron 3 of 8) -45109 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr16-6520 chr16 62596488 62596698 + 6.72 0.000 Intergenic Intergenic -560155 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr4-3226 chr4 49514512 49514722 + 6.72 0.000 Intergenic ACRO1|Satellite|acro 527975 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr1-6641 chr1 44595215 44595425 + 6.72 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 49827 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr4-7000 chr4 23480036 23480246 + 6.72 0.000 Intergenic Intergenic 401151 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr17-7519 chr17 17451357 17451567 + 6.72 0.000 Intergenic MIR|SINE|MIR -25538 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chrX-2029 chrX 16589251 16589461 + 6.72 0.000 3' UTR (NM_175859, exon 19 of 19) 3' UTR (NM_175859, exon 19 of 19) 37729 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr3-6962 chr3 164022719 164022929 + 6.72 0.000 Intergenic HERVFH21-int|LTR|ERV1 148732 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr4-3882 chr4 141915050 141915260 + 6.72 0.000 Intergenic Intergenic 278572 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr19-5246 chr19 44934495 44934705 + 6.72 0.000 Intergenic AluSz|SINE|Alu -7637 NM_001646 346 Hs.731599 NM_001646 ENSG00000267467 APOC4 APO-CIV|APOC-IV apolipoprotein C4 protein-coding chr4-2799 chr4 28229146 28229356 + 6.72 0.000 Intergenic MLT2B1|LTR|ERVL -590331 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr2-9867 chr2 193284654 193284864 + 6.72 0.000 Intergenic L1PB1|LINE|L1 534914 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr21-870 chr21 39762993 39763203 + 6.72 0.000 intron (NM_001080444, intron 2 of 8) intron (NM_001080444, intron 2 of 8) 17691 NM_001080444 150084 Hs.422120 NM_001080444 ENSG00000183067 IGSF5 GSF5|JAM4 immunoglobulin superfamily member 5 protein-coding chr17-5431 chr17 35753157 35753367 + 6.72 0.000 promoter-TSS (NM_139285) promoter-TSS (NM_139285) -384 NM_139285 246176 Hs.591194 NM_139285 ENSG00000270765 GAS2L2 CILD41|GAR17 growth arrest specific 2 like 2 protein-coding chr4-6947 chr4 18068653 18068863 + 6.72 0.000 Intergenic L2a|LINE|L2 -46883 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr8-4374 chr8 102363484 102363694 + 6.72 0.000 intron (NM_001282873, intron 1 of 58) intron (NM_001282873, intron 1 of 58) 49100 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr14-3702 chr14 104226126 104226336 + 6.72 0.000 intron (NR_146612, intron 1 of 2) MIRb|SINE|MIR 2647 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr18-2717 chr18 67117695 67117905 + 6.72 0.000 Intergenic L1MA3|LINE|L1 36216 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr1-7793 chr1 47843077 47843287 + 6.72 0.000 intron (NM_001194986, intron 2 of 6) L2a|LINE|L2 154203 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr13-3056 chr13 32924881 32925091 + 6.72 0.000 Intergenic Intergenic -13334 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr10-4080 chr10 48742662 48742872 + 6.72 0.000 intron (NM_020945, intron 11 of 61) intron (NM_020945, intron 11 of 61) 57304 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr15-3016 chr15 56554936 56555146 + 6.72 0.000 Intergenic LOR1b|LTR|ERV1 -89904 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr22-3067 chr22 40903426 40903636 + 6.72 0.000 intron (NM_022098, intron 4 of 9) AluSg7|SINE|Alu -41418 NM_145174 150353 Hs.585042 NM_145174 ENSG00000172404 DNAJB7 DJ5|HSC3 DnaJ heat shock protein family (Hsp40) member B7 protein-coding chr8-5593 chr8 93196031 93196241 + 6.72 0.000 Intergenic AluSq2|SINE|Alu -29286 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr17-4772 chr17 44644240 44644450 + 6.72 0.000 Intergenic AluJo|SINE|Alu 6004 NR_110661 101927017 Hs.560554 NR_110661 ENSG00000266979 LINC01180 - long intergenic non-protein coding RNA 1180 ncRNA chr5-8825 chr5 150559122 150559332 + 6.72 0.000 Intergenic Intergenic -41849 NM_001166208 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr2-10948 chr2 82099674 82099884 + 6.72 0.000 Intergenic Intergenic -632833 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr9-4974 chr9 18478234 18478444 + 6.72 0.000 intron (NM_052866, intron 1 of 12) intron (NM_052866, intron 1 of 12) 4186 NM_052866 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr14-3450 chr14 100205714 100205924 + 6.72 0.000 Intergenic L1ME4b|LINE|L1 -33325 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr11-10584 chr11 122984832 122985042 + 6.72 0.000 Intergenic Intergenic -3103 NM_001098169 390259 Hs.449687 NM_001098169 ENSG00000188909 BSX BSX1 brain specific homeobox protein-coding chrX-4842 chrX 103489900 103490110 + 6.72 0.000 Intergenic Intergenic 29484 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chr2-13579 chr2 156654099 156654309 + 6.72 0.000 Intergenic Intergenic 217825 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr19-4021 chr19 4278799 4279009 + 6.72 0.000 5' UTR (NM_020209, exon 1 of 6) 5' UTR (NM_020209, exon 1 of 6) 303 NM_020209 56961 Hs.7423 NM_020209 ENSG00000105251 SHD - Src homology 2 domain containing transforming protein D protein-coding chr15-2765 chr15 27656574 27656784 + 6.72 0.000 Intergenic LTR12C|LTR|ERV1 442636 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr2-13314 chr2 131429474 131429684 + 6.72 0.000 Intergenic Intergenic 15315 NR_002826 401010 Hs.452369 NR_002826 NOC2LP2 - NOC2 like nucleolar associated transcriptional repressor pseudogene 2 pseudo chr9-6453 chr9 85416467 85416677 + 6.72 0.000 Intergenic MER77|LTR|ERVL 325457 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr21-841 chr21 9761813 9762023 + 6.72 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 59143 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr5-6658 chr5 54807510 54807720 + 6.72 0.000 Intergenic Intergenic -63357 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr5-6965 chr5 143102307 143102517 + 6.72 0.000 intron (NR_146198, intron 17 of 22) intron (NR_146198, intron 17 of 22) -90088 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr18-2422 chr18 21069489 21069699 + 6.72 0.000 intron (NM_005406, intron 2 of 32) intron (NM_005406, intron 2 of 32) 42219 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr17-8298 chr17 69561138 69561348 + 6.72 0.000 Intergenic Intergenic -32744 NR_109972 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr7-7413 chr7 74403742 74403952 + 6.72 0.000 exon (NM_003388, exon 17 of 17) exon (NM_003388, exon 17 of 17) -50059 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr3-7194 chr3 190058935 190059145 + 6.72 0.000 intron (NM_001134418, intron 1 of 14) intron (NM_001134418, intron 1 of 14) 61857 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr1-14714 chr1 64596909 64597119 + 6.72 0.000 intron (NM_020925, intron 3 of 26) intron (NM_020925, intron 3 of 26) 17167 NR_039957 100616338 NR_039957 ENSG00000264470 MIR4794 - microRNA 4794 ncRNA chr15-3205 chr15 72620067 72620277 + 6.72 0.000 intron (NR_135684, intron 2 of 3) ERV3-16A3_I-int|LTR|ERVL 16783 NR_135684 102723640 Hs.154829 NR_135684 ENSG00000259783 LINC02259 - long intergenic non-protein coding RNA 2259 ncRNA chr1-12713 chr1 54516704 54516914 + 6.72 0.000 Intergenic Intergenic -31419 NM_015547 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr12-5293 chr12 111085295 111085505 + 6.72 0.000 intron (NM_015267, intron 1 of 21) L2a|LINE|L2 -14604 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr5-7802 chr5 65481891 65482101 + 6.72 0.000 promoter-TSS (NM_197941) promoter-TSS (NM_197941) -76 NM_197941 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr12-5666 chr12 91511317 91511527 + 6.72 0.000 Intergenic Intergenic -328605 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr12-7643 chr12 82211695 82211905 + 6.72 0.000 Intergenic MER57-int|LTR|ERV1 146587 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr2-8489 chr2 127261785 127261995 + 6.72 0.000 intron (NM_001303418, intron 12 of 14) L1MB8|LINE|L1 32254 NM_001303418 2071 Hs.469872 NM_000122 ENSG00000163161 ERCC3 BTF2|GTF2H|RAD25|TFIIH|TTD2|XPB ERCC excision repair 3, TFIIH core complex helicase subunit protein-coding chr14-5032 chr14 79294636 79294846 + 6.72 0.000 intron (NM_001105250, intron 1 of 6) intron (NM_001105250, intron 1 of 6) 15361 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr4-2805 chr4 34510386 34510596 + 6.72 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -240744 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr3-4310 chr3 167545019 167545229 + 6.72 0.000 intron (NM_001348951, intron 10 of 18) L1PB1|LINE|L1 -70992 NM_001012303 5276 Hs.445555 NM_006217 ENSG00000114204 SERPINI2 MEPI|PANCPIN|PI14|TSA2004 serpin family I member 2 protein-coding chr6-6914 chr6 13983762 13983972 + 6.72 0.000 Intergenic Intergenic 58674 NM_001165033 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chr7-7066 chr7 149827415 149827625 + 6.72 0.000 intron (NR_163594, intron 97 of 102) intron (NR_163594, intron 97 of 102) -10855 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding chr4-3625 chr4 11431185 11431395 + 6.72 0.000 Intergenic Intergenic -2396 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr20-1942 chr20 23750217 23750427 + 6.72 0.000 intron (NM_001898, intron 1 of 2) intron (NM_001898, intron 1 of 2) 615 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr10-6596 chr10 86251882 86252092 + 6.72 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 12801 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr20-3750 chr20 19158808 19159018 + 6.72 0.000 Intergenic L1ME3D|LINE|L1 -53729 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr1-7438 chr1 48052532 48052742 + 6.72 0.000 Intergenic Intergenic -55252 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr11-8099 chr11 43508670 43508880 + 6.72 0.000 Intergenic L2c|LINE|L2 -50881 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA chr14-3363 chr14 91397852 91398062 + 6.72 0.000 intron (NM_001080414, intron 3 of 29) intron (NM_001080414, intron 3 of 29) 19863 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr3-5324 chr3 128631785 128631995 + 6.72 0.000 intron (NM_002950, intron 4 of 9) intron (NM_002950, intron 4 of 9) 18928 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chr19-4674 chr19 17362429 17362639 + 6.72 0.000 intron (NM_031310, intron 3 of 5) (CCAATG)n|Simple_repeat|Simple_repeat 14808 NM_031310 83483 Hs.107125 NM_031310 ENSG00000130300 PLVAP DIAR10|FELS|PV-1|PV1|gp68 plasmalemma vesicle associated protein protein-coding chrX-5233 chrX 136548964 136549174 + 6.72 0.000 intron (NM_016267, intron 3 of 4) intron (NM_016267, intron 3 of 4) -1809 NR_030631 100126324 NR_030631 ENSG00000216060 MIR934 MIRN934|hsa-mir-934|mir-934 microRNA 934 ncRNA chr8-3806 chr8 28261668 28261878 + 6.72 0.000 Intergenic Intergenic -55495 NM_006228 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr1-10716 chr1 194104446 194104656 + 6.72 0.000 Intergenic L1PB4|LINE|L1 799806 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr2-11847 chr2 20396144 20396354 + 6.72 0.000 Intergenic Intergenic -43996 NM_001352925 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr6-6184 chr6 11784462 11784672 + 6.72 0.000 Intergenic L1MA8|LINE|L1 -5520 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr1-12539 chr1 26344438 26344648 + 6.72 0.000 exon (NM_001039775, exon 2 of 20) exon (NM_001039775, exon 2 of 20) 9587 NM_001039775 55057 Hs.128738 NM_017977 ENSG00000176092 CRYBG2 AIM1L crystallin beta-gamma domain containing 2 protein-coding chr10-7709 chr10 30566386 30566596 + 6.72 0.000 Intergenic L1MB8|LINE|L1 63262 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr8-5013 chr8 4484174 4484384 + 6.72 0.000 intron (NM_033225, intron 2 of 69) intron (NM_033225, intron 2 of 69) 510635 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr1-15322 chr1 119414339 119414549 + 6.72 0.000 promoter-TSS (NM_001166120) promoter-TSS (NM_001166120) -487 NM_001166120 3284 Hs.654399 NM_000198 ENSG00000203859 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding chr5-4052 chr5 43662732 43662942 + 6.72 0.000 intron (NM_012343, intron 17 of 21) AluJb|SINE|Alu -59607 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr13-4488 chr13 113639034 113639244 + 6.72 0.000 intron (NM_007111, intron 11 of 11) intron (NM_007111, intron 11 of 11) 19059 NM_000705 496 Hs.434202 NM_000705 ENSG00000186009 ATP4B ATP6B ATPase H+/K+ transporting subunit beta protein-coding chr20-4130 chr20 43128904 43129114 + 6.72 0.000 intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) 60897 NM_133170 11122 Hs.526879 NM_007050 ENSG00000196090 PTPRT RPTPrho protein tyrosine phosphatase receptor type T protein-coding chr3-5109 chr3 49641015 49641225 + 6.72 0.000 intron (NM_003458, intron 2 of 11) L2a|LINE|L2 -33231 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chrX-4108 chrX 24619713 24619923 + 6.72 0.000 intron (NM_001163264, intron 1 of 7) intron (NM_001163264, intron 1 of 7) 27529 NM_001163265 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr9-6482 chr9 94571878 94572088 + 6.72 0.000 intron (NM_003837, intron 3 of 6) intron (NM_003837, intron 3 of 6) 16938 NR_121566 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr12-7891 chr12 106845539 106845749 + 6.72 0.000 intron (NR_147139, intron 6 of 7) L2a|LINE|L2 -70813 NR_040246 100287944 Hs.742087 NR_040246 ENSG00000257545 LOC100287944 - uncharacterized LOC100287944 ncRNA chr9-5627 chr9 119298042 119298252 + 6.72 0.000 intron (NM_014618, intron 2 of 7) intron (NM_014618, intron 2 of 7) 71288 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr1-13539 chr1 6498477 6498687 + 6.72 0.000 intron (NM_198681, intron 1 of 21) intron (NM_198681, intron 1 of 21) -1138 NM_001042663 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr2-4748 chr2 10929770 10929980 + 6.72 0.000 Intergenic HAL1ME|LINE|L1 17941 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr12-3724 chr12 13755739 13755949 + 6.72 0.000 intron (NM_000834, intron 2 of 12) MLT1A0|LTR|ERVL-MaLR 224512 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr3-10130 chr3 113585546 113585756 + 6.72 0.000 intron (NR_136285, intron 7 of 20) intron (NR_136285, intron 7 of 20) -9225 NR_039648 100616476 NR_039648 ENSG00000265253 MIR4446 mir-4446 microRNA 4446 ncRNA chr6-8517 chr6 159149297 159149507 + 6.72 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -19998 NM_032532 84624 Hs.520525 NM_032532 ENSG00000164694 FNDC1 AGS8|FNDC2|MEL4B3|bA243O10.1|dJ322A24.1 fibronectin type III domain containing 1 protein-coding chr4-4184 chr4 10573378 10573588 + 6.72 0.000 intron (NM_052964, intron 4 of 18) intron (NM_052964, intron 4 of 18) 111285 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr16-6183 chr16 25859868 25860078 + 6.72 0.000 intron (NM_006040, intron 1 of 1) MER1B|DNA|hAT-Charlie -165264 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr3-8712 chr3 189148469 189148679 + 6.72 0.000 Intergenic L2c|LINE|L2 -23397 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr9-4180 chr9 23610525 23610735 + 6.72 0.000 intron (NR_121602, intron 9 of 27) LTR86A1|LTR|ERVL 61769 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr9-5556 chr9 110494847 110495057 + 6.72 0.000 intron (NM_153366, intron 8 of 47) L2c|LINE|L2 84789 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding chr12-5829 chr12 34126261 34126471 + 6.72 0.000 Intergenic HERV15-int|LTR|ERV1 103870 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr19-4994 chr19 46926787 46926997 + 6.72 0.000 intron (NM_004491, intron 2 of 6) intron (NM_004491, intron 2 of 6) 65895 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr4-8719 chr4 183330175 183330385 + 6.72 0.000 Intergenic Intergenic -7854 NM_001185149 100132463 Hs.727475 NM_001185149 ENSG00000185758 CLDN24 CLDN21 claudin 24 protein-coding chr7-4881 chr7 114923167 114923377 + 6.72 0.000 intron (NM_001166345, intron 2 of 4) intron (NM_001166345, intron 2 of 4) 1118 NM_199072 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chr12-4671 chr12 47590237 47590447 + 6.72 0.000 Intergenic Intergenic 115688 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr14-3171 chr14 70045951 70046161 + 6.72 0.000 non-coding (NR_104122, exon 6 of 6) non-coding (NR_104122, exon 6 of 6) 34161 NM_182936 6547 Hs.337696 NM_033262 ENSG00000100678 SLC8A3 NCX3 solute carrier family 8 member A3 protein-coding chr7-7927 chr7 8334721 8334931 + 6.72 0.000 intron (NR_125740, intron 3 of 5) L2c|LINE|L2 -72214 NM_004968 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr12-2734 chr12 14669404 14669614 + 6.72 0.000 intron (NM_004963, intron 10 of 26) AluJb|SINE|Alu 27090 NM_004963 2984 Hs.524278 NM_004963 ENSG00000070019 GUCY2C DIAR6|GC-C|GUC2C|MECIL|MUCIL|STAR guanylate cyclase 2C protein-coding chr12-8207 chr12 123297671 123297881 + 6.72 0.000 intron (NM_018183, intron 31 of 31) intron (NM_018183, intron 31 of 31) -25536 NR_073007 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr3-10109 chr3 112358654 112358864 + 6.72 0.000 intron (NR_158642, intron 6 of 6) intron (NR_158642, intron 6 of 6) 25603 NR_158642 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding chr1-11361 chr1 37007005 37007215 + 6.72 0.000 intron (NM_000831, intron 1 of 15) intron (NM_000831, intron 1 of 15) 27405 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr9-7824 chr9 82332982 82333192 + 6.72 0.000 Intergenic Intergenic 344315 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr1-11443 chr1 76559364 76559574 + 6.72 0.000 intron (NM_001349109, intron 3 of 3) L1MB8|LINE|L1 219798 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr15-4979 chr15 79842396 79842606 + 6.72 0.000 Intergenic Intergenic 54496 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr10-8045 chr10 63936031 63936241 + 6.72 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -414246 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr12-5602 chr12 49010314 49010524 + 6.72 0.000 intron (NR_147178, intron 2 of 2) HAL1|LINE|L1 8357 NM_002733 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding chr1-7573 chr1 208779535 208779745 + 6.72 0.000 Intergenic L2|LINE|L2 50952 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr18-1077 chr18 39953224 39953434 + 6.72 0.000 Intergenic AluJr|SINE|Alu 111620 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr4-3958 chr4 181702040 181702250 + 6.72 0.000 Intergenic Intergenic 127828 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr10-2827 chr10 24153485 24153695 + 6.72 0.000 intron (NM_001098500, intron 2 of 18) intron (NM_001098500, intron 2 of 18) -55201 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr1-8958 chr1 9215117 9215327 + 6.72 0.000 Intergenic Intergenic -19552 NM_004285 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr3-6355 chr3 84619567 84619777 + 6.72 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 249903 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr10-6311 chr10 103571158 103571368 + 6.72 0.000 intron (NM_004210, intron 2 of 5) intron (NM_004210, intron 2 of 5) -53821 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr3-7945 chr3 157629483 157629693 + 6.72 0.000 Intergenic Intergenic 86244 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr4-8184 chr4 131920881 131921091 + 6.72 0.000 Intergenic Intergenic 156148 NR_125884 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr7-5323 chr7 26607920 26608130 + 6.72 0.000 Intergenic Intergenic -29846 NR_161202 285941 Hs.413394 NR_161201 C7orf71 - chromosome 7 open reading frame 71 ncRNA chrX-5040 chrX 122187356 122187566 + 6.72 0.000 Intergenic Intergenic 816489 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr1-14937 chr1 86205677 86205887 + 6.72 0.000 Intergenic Intergenic -48798 NR_146340 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr18-1204 chr18 32332432 32332642 + 6.72 0.000 intron (NM_001242409, intron 2 of 5) intron (NM_001242409, intron 2 of 5) 138345 NM_001242409 64762 Hs.444314 NM_022751 ENSG00000141441 GAREM1 C18orf11|FAM59A|GAREM|Gm944 GRB2 associated regulator of MAPK1 subtype 1 protein-coding chr15-3440 chr15 91018597 91018807 + 6.72 0.000 intron (NM_001289149, intron 1 of 21) MER20|DNA|hAT-Charlie 3919 NM_018668 26276 Hs.745007 NM_018668 ENSG00000184056 VPS33B - VPS33B late endosome and lysosome associated protein-coding chr5-4435 chr5 2242285 2242495 + 6.72 0.000 Intergenic Intergenic 69811 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr7-4133 chr7 65980461 65980671 + 6.72 0.000 intron (NR_120531, intron 1 of 10) intron (NR_120531, intron 1 of 10) 1647 NM_001293104 2990 Hs.255230 NM_000181 ENSG00000169919 GUSB BG|MPS7 glucuronidase beta protein-coding chr17-8090 chr17 55527469 55527679 + 6.72 0.000 Intergenic Intergenic -105739 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr5-5494 chr5 141572393 141572603 + 6.72 0.000 intron (NM_005219, intron 16 of 27) intron (NM_005219, intron 16 of 27) 14187 NR_038333 100505658 Hs.655458 NR_038333 ENSG00000246422 LOC100505658 - uncharacterized LOC100505658 ncRNA chr19-7075 chr19 55396327 55396537 + 6.72 0.000 intron (NM_001363697, intron 4 of 4) L1ME3B|LINE|L1 6225 NR_145781 109623451 NR_145781 SNORD157 - small nucleolar RNA, C/D box 157 snoRNA chr4-3673 chr4 40993333 40993543 + 6.72 0.000 intron (NM_004307, intron 6 of 17) AluJr|SINE|Alu -136246 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr10-4059 chr10 32992725 32992935 + 6.72 0.000 Intergenic Intergenic -34600 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr14-5090 chr14 86728104 86728314 + 6.72 0.000 Intergenic Intergenic -177569 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr13-4073 chr13 76262253 76262463 + 6.72 0.000 Intergenic Intergenic -327226 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr20-1832 chr20 381843 382053 + 6.72 0.000 intron (NM_001301196, intron 1 of 3) CpG 605 NM_001301193 57761 Hs.516826 NM_021158 ENSG00000101255 TRIB3 C20orf97|NIPK|SINK|SKIP3|TRB3 tribbles pseudokinase 3 protein-coding chr4-1559 chr4 1113900 1114110 + 6.72 0.000 promoter-TSS (NR_159501) promoter-TSS (NR_159501) 366 NR_134676 105374344 Hs.128102 NR_134676 ENSG00000251652 LOC105374344 - uncharacterized LOC105374344 ncRNA chr5-4942 chr5 76081939 76082149 + 6.72 0.000 Intergenic Intergenic -1339 NM_001297716 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr19-5907 chr19 48316327 48316537 + 6.72 0.000 intron (NM_144577, intron 3 of 13) L1ME1|LINE|L1 3067 NM_144577 93233 Hs.112645 NM_144577 ENSG00000105479 CCDC114 CILD20 coiled-coil domain containing 114 protein-coding chr22-2241 chr22 25846343 25846553 + 6.72 0.000 intron (NM_001318245, intron 19 of 43) MIRb|SINE|MIR 104260 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr4-8271 chr4 141174110 141174320 + 6.72 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -40746 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chrX-5183 chrX 133435637 133435847 + 6.72 0.000 Intergenic Intergenic -20253 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr10-4740 chr10 1320077 1320287 + 6.72 0.000 intron (NM_018702, intron 3 of 9) intron (NM_018702, intron 3 of 9) 160414 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr17-5372 chr17 31203062 31203272 + 6.72 0.000 intron (NM_001042492, intron 11 of 57) intron (NM_001042492, intron 11 of 57) 94072 NM_002544 4974 Hs.113874 NM_002544 ENSG00000126861 OMG OMGP oligodendrocyte myelin glycoprotein protein-coding chr5-7643 chr5 51829084 51829294 + 6.72 0.000 Intergenic Intergenic -178842 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr4-1503 chr4 53432322 53432532 + 6.72 0.000 intron (NM_001134938, intron 10 of 14) AluSq2|SINE|Alu 54774 NM_001134938 81608 Hs.555109 NM_030917 ENSG00000145216 FIP1L1 FIP1|Rhe|hFip1 factor interacting with PAPOLA and CPSF1 protein-coding chr3-9867 chr3 80988089 80988299 + 6.72 0.000 Intergenic L1PREC2|LINE|L1 -5674 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr14-2379 chr14 40959099 40959309 + 6.72 0.000 intron (NR_109758, intron 1 of 3) THE1B-int|LTR|ERVL-MaLR 4493 NR_109758 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr18-2397 chr18 3346345 3346555 + 6.72 0.000 Intergenic Intergenic 4109 NR_146506 105371964 Hs.105326 NR_146506 ENSG00000259256 LINC01895 - long intergenic non-protein coding RNA 1895 ncRNA chrX-3942 chrX 10438519 10438729 + 6.72 0.000 Intergenic L1ME1|LINE|L1 128979 NM_001193279 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding ML143372.1-2 ML143372.1 311753 311963 + 6.72 0.000 NA NA NA NA chr21-1179 chr21 42688876 42689086 + 6.72 0.000 intron (NM_001001577, intron 2 of 15) intron (NM_001001577, intron 2 of 15) 35229 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr4-8265 chr4 140499470 140499680 + 6.72 0.000 Intergenic Intergenic -1282 NM_001277353 152586 Hs.189067 NM_001034840 ENSG00000205301 MGAT4D GnT1IP MGAT4 family member D protein-coding chr8-5906 chr8 17397779 17397989 + 6.72 0.000 intron (NM_004686, intron 1 of 13) L1ME2|LINE|L1 15467 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr9-5005 chr9 23357380 23357590 + 6.72 0.000 Intergenic L1PBa|LINE|L1 314914 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chrX-3002 chrX 49997687 49997897 + 6.72 0.000 intron (NM_001127899, intron 3 of 14) AluJo|SINE|Alu -5356 NR_030241 693124 NR_030241 ENSG00000207758 MIR532 MIRN532|hsa-mir-532|mir-532 microRNA 532 ncRNA chr11-6226 chr11 46977697 46977907 + 6.72 0.000 intron (NM_001278222, intron 1 of 7) intron (NM_001278222, intron 1 of 7) 41041 NM_001003677 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr12-3582 chr12 46342634 46342844 + 6.72 0.000 Intergenic L1M1|LINE|L1 30034 NM_001307936 54407 Hs.221847 NM_018976 ENSG00000134294 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38 member 2 protein-coding chr5-7376 chr5 20785791 20786001 + 6.72 0.000 intron (NR_149120, intron 4 of 11) L1MB3|LINE|L1 -170361 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA chr6-6518 chr6 125931108 125931318 + 6.72 0.000 3' UTR (NM_001199619, exon 17 of 17) 3' UTR (NM_001199619, exon 17 of 17) 11958 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr6-2986 chr6 41444227 41444437 + 6.72 0.000 Intergenic (GGAGGT)n|Simple_repeat|Simple_repeat -58112 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr3-4537 chr3 127339107 127339317 + 6.72 0.000 intron (NR_110147, intron 3 of 4) (AC)n|Simple_repeat|Simple_repeat -51166 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr1-7210 chr1 220297150 220297360 + 6.72 0.000 Intergenic Intergenic -24802 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr5-8839 chr5 151239270 151239480 + 6.72 0.000 Intergenic MER102a|DNA|hAT-Charlie -13810 NM_000405 2760 Hs.483873 NM_000405 ENSG00000196743 GM2A GM2-AP|SAP-3 GM2 ganglioside activator protein-coding chr2-6450 chr2 157977076 157977286 + 6.72 0.000 Intergenic L1MA2|LINE|L1 -17998 NM_001135098 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr8-5425 chr8 32507542 32507752 + 6.72 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -40563 NM_013958 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr4-4813 chr4 107391649 107391859 + 6.72 0.000 Intergenic MER121|DNA|hAT? 328480 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr11-8888 chr11 15106089 15106299 + 6.72 0.000 Intergenic L2b|LINE|L2 -6230 NM_001031853 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr18-3020 chr18 26198745 26198955 + 6.72 0.000 Intergenic MER21B|LTR|ERVL -27595 NR_121653 6875 Hs.369519 NM_005640 ENSG00000141384 TAF4B SPGF13|TAF2C2|TAFII105 TATA-box binding protein associated factor 4b protein-coding chr16-6375 chr16 52441168 52441378 + 6.72 0.000 intron (NM_001146188, intron 7 of 7) intron (NM_001146188, intron 7 of 7) 105870 NM_001080430 27324 Hs.132574 NM_001080430 ENSG00000103460 TOX3 CAGF9|TNRC9 TOX high mobility group box family member 3 protein-coding chr2-11152 chr2 144353479 144353689 + 6.72 0.000 Intergenic Intergenic -20515 NM_001354360 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr11-7521 chr11 9081162 9081372 + 6.72 0.000 intron (NM_001367977, intron 2 of 22) L1MB3|LINE|L1 9112 NR_049874 100847015 NR_049874 ENSG00000264984 MIR5691 - microRNA 5691 ncRNA chrX-1976 chrX 10972873 10973083 + 6.72 0.000 Intergenic Intergenic -138354 NM_001122608 3052 Hs.211571 NM_005333 ENSG00000004961 HCCS CCHL|LSDMCA1|MCOPS7|MLS holocytochrome c synthase protein-coding chr12-3912 chr12 126895426 126895636 + 6.72 0.000 Intergenic AluSz|SINE|Alu -20841 NR_033970 440117 Hs.127100 NR_033970 ENSG00000249873 LINC02372 - long intergenic non-protein coding RNA 2372 ncRNA chr10-5083 chr10 44775380 44775590 + 6.72 0.000 Intergenic Intergenic -135831 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr15-3200 chr15 71975646 71975856 + 6.72 0.000 intron (NM_006901, intron 12 of 41) MER21A|LTR|ERVL -138507 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr10-4443 chr10 71232354 71232564 + 6.72 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -14231 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr3-5575 chr3 6185297 6185507 + 6.72 0.000 Intergenic L1MC2|LINE|L1 620047 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr2-6651 chr2 7093242 7093452 + 6.72 0.000 Intergenic Intergenic -15467 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chrY-21 chrY 10937356 10937566 + 6.72 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 1026663 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 ncRNA chr1-3929 chr1 91620094 91620304 + 6.72 0.000 Intergenic L1M6|LINE|L1 119091 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr2-6913 chr2 105873904 105874114 + 6.72 0.000 intron (NM_001004722, intron 3 of 3) intron (NM_001004722, intron 3 of 3) 22162 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr3-4179 chr3 127183058 127183268 + 6.72 0.000 Intergenic Intergenic -9968 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr12-5283 chr12 110561994 110562204 + 6.72 0.000 intron (NR_138550, intron 1 of 4) AluSx3|SINE|Alu 21219 NR_138550 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr13-3295 chr13 49023450 49023660 + 6.72 0.000 intron (NM_001079673, intron 2 of 25) intron (NM_001079673, intron 2 of 25) 46893 NR_103528 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr1-9827 chr1 60870323 60870533 + 6.72 0.000 Intergenic Intergenic -44844 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr6-5022 chr6 110701166 110701376 + 6.72 0.000 intron (NM_001300963, intron 3 of 13) AluYm1|SINE|Alu -113350 NM_001287215 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr1-12808 chr1 85191427 85191637 + 6.72 0.000 intron (NM_032184, intron 1 of 6) AluSg|SINE|Alu 9484 NM_032184 84144 Hs.533853 NM_032184 ENSG00000097096 SYDE2 - synapse defective Rho GTPase homolog 2 protein-coding chr7-3857 chr7 102273825 102274035 + 6.72 0.000 intron (NM_001913, intron 15 of 22) intron (NM_001913, intron 15 of 22) -11211 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr1-13987 chr1 25602155 25602365 + 6.72 0.000 Intergenic Intergenic -15208 NM_001289010 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr11-8495 chr11 120297919 120298129 + 6.72 0.000 intron (NM_001244682, intron 3 of 12) intron (NM_001244682, intron 3 of 12) -27275 NM_001198673 219902 Hs.643516 NM_174926 ENSG00000181264 TLCD5 TMEM136 TLC domain containing 5 protein-coding chr6-7295 chr6 43668351 43668561 + 6.72 0.000 intron (NM_001193341, intron 5 of 5) intron (NM_001193341, intron 5 of 5) 19356 NM_001193343 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr12-3159 chr12 48905289 48905499 + 6.72 0.000 intron (NM_001286957, intron 2 of 7) MIR3|SINE|MIR 1261 NM_001286957 85478 Hs.512805 NM_033124 ENSG00000139537 CCDC65 CFAP250|DRC2|FAP250|NYD-SP28 coiled-coil domain containing 65 protein-coding chr8-5080 chr8 41078273 41078483 + 6.72 0.000 Intergenic Intergenic -180552 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr16-6201 chr16 27729832 27730042 + 6.72 0.000 intron (NM_015202, intron 14 of 27) intron (NM_015202, intron 14 of 27) -10908 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr9-8345 chr9 116368805 116369015 + 6.72 0.000 intron (NM_002581, intron 19 of 21) intron (NM_002581, intron 19 of 21) 31696 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr3-6026 chr3 49517338 49517548 + 6.72 0.000 intron (NM_001177640, intron 3 of 3) intron (NM_001177640, intron 3 of 3) 36923 NR_038866 100132677 Hs.435651 NR_038866 ENSG00000226913 BSN-DT BSN-AS2 BSN divergent transcript ncRNA chr7-2756 chr7 47968906 47969116 + 6.72 0.000 intron (NM_004507, intron 6 of 7) intron (NM_004507, intron 6 of 7) 10604 NR_037917 3364 Hs.152983 NM_004507 ENSG00000136273 HUS1 hHUS1 HUS1 checkpoint clamp component protein-coding chr8-5883 chr8 15677586 15677796 + 6.72 0.000 intron (NM_001356429, intron 6 of 10) intron (NM_001356429, intron 6 of 10) 137428 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr13-959 chr13 111131843 111132053 + 6.72 0.000 intron (NM_001113512, intron 1 of 17) intron (NM_001113512, intron 1 of 17) -16270 NR_046667 100874238 Hs.569218 NR_046667 ENSG00000235875 ARHGEF7-AS2 - ARHGEF7 antisense RNA 2 ncRNA chr3-10020 chr3 101984374 101984584 + 6.72 0.000 intron (NR_026934, intron 2 of 3) intron (NR_026934, intron 2 of 3) 43620 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr2-10973 chr2 95239627 95239837 + 6.72 0.000 Intergenic AluSx1|SINE|Alu -34717 NM_001165977 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding chr14-4193 chr14 89701507 89701717 + 6.72 0.000 Intergenic CpG -82447 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr1-7447 chr1 54787805 54788015 + 6.72 0.000 intron (NM_001114108, intron 2 of 6) intron (NM_001114108, intron 2 of 6) 13413 NM_001114108 55001 Hs.16230 NM_017904 ENSG00000006555 TTC22 - tetratricopeptide repeat domain 22 protein-coding chr4-7749 chr4 93378660 93378870 + 6.72 0.000 intron (NM_001286838, intron 7 of 14) intron (NM_001286838, intron 7 of 14) -449988 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr22-4031 chr22 41145299 41145509 + 6.72 0.000 intron (NM_001362843, intron 10 of 29) intron (NM_001362843, intron 10 of 29) 52097 NR_110514 101927279 Hs.517517 NR_110514 EP300-AS1 - EP300 antisense RNA 1 ncRNA chrX-4488 chrX 64236617 64236827 + 6.72 0.000 Intergenic MSTA|LTR|ERVL-MaLR -6115 NM_130388 142689 Hs.56281 NM_130388 ENSG00000198881 ASB12 - ankyrin repeat and SOCS box containing 12 protein-coding chr21-522 chr21 36404587 36404797 + 6.72 0.000 intron (NM_005441, intron 8 of 13) AluSp|SINE|Alu 19300 NM_005441 8208 Hs.75238 NM_005441 ENSG00000159259 CHAF1B CAF-1|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7|MPP7 chromatin assembly factor 1 subunit B protein-coding chr1-11938 chr1 63192258 63192468 + 6.72 0.000 intron (NR_038252, intron 5 of 11) intron (NR_038252, intron 5 of 11) 124894 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr3-9406 chr3 48359784 48359994 + 6.72 0.000 Intergenic L1MA8|LINE|L1 -12330 NM_001159929 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding chrX-5203 chrX 134599694 134599904 + 6.72 0.000 intron (NM_001316889, intron 1 of 1) intron (NM_001316889, intron 1 of 1) 49775 NR_038998 100506757 Hs.130961 NR_038998 LINC00629 LINC00629A|LINC00629B|LINC00629C|LINC00629D long intergenic non-protein coding RNA 629 ncRNA chr14-5226 chr14 97803784 97803994 + 6.72 0.000 Intergenic AluJo|SINE|Alu -41058 NR_146447 100132612 Hs.587781 NR_146447 ENSG00000258869 LINC02312 - long intergenic non-protein coding RNA 2312 ncRNA chr9-6604 chr9 127762740 127762950 + 6.72 0.000 promoter-TSS (NM_001142532) promoter-TSS (NM_001142532) -405 NM_001142531 10044 Hs.306412 NM_005489 ENSG00000095370 SH2D3C CHAT|NSP3|PRO34088|SHEP1 SH2 domain containing 3C protein-coding chr11-7465 chr11 128630482 128630692 + 6.72 0.000 Intergenic Intergenic -43029 NM_001143820 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr5-6893 chr5 131357677 131357887 + 6.72 0.000 intron (NM_020240, intron 2 of 5) L2c|LINE|L2 93773 NM_020240 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding chr4-4765 chr4 98976493 98976703 + 6.72 0.000 Intergenic AluSz|SINE|Alu -19123 NM_015143 23173 Hs.480364 NM_015143 ENSG00000164024 METAP1 MAP1A|MetAP1A methionyl aminopeptidase 1 protein-coding chr5-8065 chr5 94254217 94254427 + 6.72 0.000 intron (NM_001145678, intron 20 of 20) MamSINE1|SINE|tRNA-RTE -142623 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr13-1699 chr13 86781915 86782125 + 6.72 0.000 Intergenic L1PA11|LINE|L1 -129900 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr6-5808 chr6 15011060 15011270 + 6.72 0.000 Intergenic L1MB2|LINE|L1 -234904 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr19-4766 chr19 31003047 31003257 + 6.72 0.000 Intergenic Intergenic -164358 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr20-3542 chr20 1478568 1478778 + 6.72 0.000 intron (NM_001134836, intron 2 of 4) intron (NM_001134836, intron 2 of 4) -10981 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding chr8-6823 chr8 97277647 97277857 + 6.72 0.000 exon (NM_033512, exon 1 of 1) exon (NM_033512, exon 1 of 1) 176 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr5-3909 chr5 160994821 160995031 + 6.72 0.000 Intergenic HERVL-int|LTR|ERVL -56300 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr3-9587 chr3 55818852 55819062 + 6.72 0.000 intron (NR_132749, intron 13 of 17) intron (NR_132749, intron 13 of 17) 33637 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr10-3928 chr10 85532388 85532598 + 6.72 0.000 Intergenic Intergenic -45238 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr11-6456 chr11 66814602 66814812 + 6.72 0.000 intron (NM_024650, intron 10 of 16) intron (NM_024650, intron 10 of 16) -28734 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr11-5665 chr11 128463481 128463691 + 6.72 0.000 exon (NM_001162422, exon 3 of 4) exon (NM_001162422, exon 3 of 4) 58724 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr12-8008 chr12 112434722 112434932 + 6.72 0.000 intron (NM_001330437, intron 1 of 15) AluSz6|SINE|Alu 15880 NM_080601 5781 Hs.506852 NM_002834 ENSG00000179295 PTPN11 BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase non-receptor type 11 protein-coding chr2-7282 chr2 235850576 235850786 + 6.72 0.000 intron (NM_001037131, intron 9 of 17) intron (NM_001037131, intron 9 of 17) 317705 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr3-11082 chr3 184946697 184946907 + 6.72 0.000 intron (NM_001009921, intron 35 of 46) intron (NM_001009921, intron 35 of 46) 134295 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr16-4412 chr16 50898018 50898228 + 6.72 0.000 intron (NR_039672, intron 2 of 6) ERV3-16A3_I-int|LTR|ERVL 19350 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chr2-6552 chr2 218088757 218088967 + 6.72 0.000 intron (NR_034176, intron 12 of 13) (TC)n|Simple_repeat|Simple_repeat 19847 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr15-3892 chr15 97168644 97168854 + 6.72 0.000 Intergenic Intergenic 353062 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chrX-3434 chrX 20098496 20098706 + 6.72 0.000 intron (NM_152780, intron 1 of 15) intron (NM_152780, intron 1 of 15) 18039 NM_001168467 256714 Hs.127951 NM_152780 ENSG00000184368 MAP7D2 - MAP7 domain containing 2 protein-coding chr20-4108 chr20 41304086 41304296 + 6.72 0.000 Intergenic L2|LINE|L2 -4071 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr10-5596 chr10 93151407 93151617 + 6.72 0.000 Intergenic Intergenic 77619 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr13-3371 chr13 79478305 79478515 + 6.72 0.000 intron (NR_046685, intron 2 of 2) intron (NR_046685, intron 2 of 2) -2714 NM_019080 54602 Hs.525093 NM_019080 ENSG00000102471 NDFIP2 N4WBP5A Nedd4 family interacting protein 2 protein-coding chr1-7754 chr1 35539073 35539283 + 6.72 0.000 intron (NM_024874, intron 2 of 20) intron (NM_024874, intron 2 of 20) 18225 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr1-12083 chr1 154419557 154419767 + 6.72 0.000 intron (NM_001206866, intron 1 of 6) intron (NM_001206866, intron 1 of 6) -13098 NR_147855 101928101 Hs.617089 NR_147855 ENSG00000228013 IL6R-AS1 - IL6R antisense RNA 1 ncRNA chr9-4210 chr9 37574241 37574451 + 6.72 0.000 intron (NM_012166, intron 1 of 10) intron (NM_012166, intron 1 of 10) 2034 NM_012166 26267 Hs.709527 NM_012166 ENSG00000147912 FBXO10 FBX10|PRMT11 F-box protein 10 protein-coding chr15-4793 chr15 71985461 71985671 + 6.72 0.000 intron (NM_006901, intron 11 of 41) L1ME3A|LINE|L1 -128692 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr6-4631 chr6 47042721 47042931 + 6.72 0.000 promoter-TSS (NM_025048) promoter-TSS (NM_025048) -494 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr3-4715 chr3 58071982 58072192 + 6.72 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 63665 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr17-6208 chr17 6605795 6606005 + 6.72 0.000 intron (NR_147088, intron 11 of 17) intron (NR_147088, intron 11 of 17) 34811 NM_014804 9851 Hs.28070 NM_014804 ENSG00000198920 KIAA0753 MNR|OFIP KIAA0753 protein-coding chrX-5126 chrX 129622873 129623083 + 6.72 0.000 Intergenic Intergenic 31978 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr7-5804 chr7 81600623 81600833 + 6.72 0.000 intron (NR_126025, intron 4 of 10) intron (NR_126025, intron 4 of 10) 25488 NR_126026 100128317 Hs.571267 NR_126025 ENSG00000233491 LOC100128317 - uncharacterized LOC100128317 ncRNA chr3-10546 chr3 140580771 140580981 + 6.72 0.000 Intergenic Intergenic -72087 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr1-3521 chr1 197034984 197035194 + 6.72 0.000 Intergenic AluSx|SINE|Alu 32178 NM_001994 2165 Hs.435782 NM_001994 ENSG00000143278 F13B FXIIIB coagulation factor XIII B chain protein-coding chr2-14413 chr2 221619640 221619850 + 6.72 0.000 Intergenic Intergenic -45543 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr11-6357 chr11 64062519 64062729 + 6.72 0.000 intron (NM_014067, intron 3 of 10) L2b|LINE|L2 -41266 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chrX-2615 chrX 107733116 107733326 + 6.72 0.000 intron (NM_198057, intron 1 of 2) MIRc|SINE|MIR -16159 NM_004089 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr7-3366 chr7 100647368 100647578 + 6.72 0.000 exon (NM_016188, exon 8 of 14) exon (NM_016188, exon 8 of 14) -5921 NM_003227 7036 Hs.544932 NM_003227 ENSG00000106327 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding chr11-7647 chr11 62947517 62947727 + 6.72 0.000 Intergenic Intergenic -26259 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr2-12719 chr2 80178485 80178695 + 6.72 0.000 intron (NM_001282598, intron 7 of 17) HERVL-int|LTR|ERVL 126162 NM_178839 347730 Hs.591580 NM_178839 ENSG00000162951 LRRTM1 - leucine rich repeat transmembrane neuronal 1 protein-coding chr22-4273 chr22 49141645 49141855 + 6.72 0.000 Intergenic Intergenic 274980 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr2-12975 chr2 104880783 104880993 + 6.72 0.000 Intergenic Intergenic -8293 NR_110373 102682016 Hs.638438 NR_110373 ENSG00000229743 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA chr1-9135 chr1 18720793 18721003 + 6.72 0.000 intron (NM_001135254, intron 7 of 8) intron (NM_001135254, intron 7 of 8) 90052 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr9-3517 chr9 33415402 33415612 + 6.72 0.000 Intergenic Intergenic -12825 NR_134513 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr4-5047 chr4 141930396 141930606 + 6.72 0.000 Intergenic Intergenic 293918 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr1-14486 chr1 48536677 48536887 + 6.72 0.000 intron (NM_001323574, intron 12 of 13) intron (NM_001323574, intron 12 of 13) -64574 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr13-1555 chr13 30839579 30839789 + 6.72 0.000 Intergenic SVA_D|Retroposon|SVA 36478 NR_047012 100874158 Hs.577982 NR_047012 ENSG00000237879 LINC00398 - long intergenic non-protein coding RNA 398 ncRNA chr10-7590 chr10 19537139 19537349 + 6.72 0.000 intron (NM_001142308, intron 32 of 39) L2a|LINE|L2 191306 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr19-1884 chr19 41190939 41191149 + 6.72 0.000 Intergenic Intergenic -2175 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr6-7996 chr6 116052877 116053087 + 6.72 0.000 intron (NM_002031, intron 1 of 7) MIR|SINE|MIR 7909 NM_002031 2444 Hs.89426 NM_002031 ENSG00000111816 FRK GTK|PTK5|RAK fyn related Src family tyrosine kinase protein-coding chr19-4772 chr19 32293103 32293313 + 6.72 0.000 Intergenic Intergenic -52402 NM_014910 22847 Hs.205392 NM_014910 ENSG00000168813 ZNF507 - zinc finger protein 507 protein-coding chr7-9233 chr7 120503312 120503522 + 6.72 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 230242 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr7-5564 chr7 47180345 47180555 + 6.72 0.000 Intergenic Intergenic 284353 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr7-9445 chr7 134381917 134382127 + 6.72 0.000 Intergenic Intergenic -65092 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr13-1877 chr13 30270044 30270254 + 6.72 0.000 intron (NM_032116, intron 3 of 10) SVA_D|Retroposon|SVA 36862 NM_001014380 84056 Hs.243596 NM_032116 ENSG00000102781 KATNAL1 - katanin catalytic subunit A1 like 1 protein-coding chr7-4075 chr7 14336545 14336755 + 6.72 0.000 intron (NM_001350717, intron 22 of 24) intron (NM_001350717, intron 22 of 24) -345225 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr8-2443 chr8 114862081 114862291 + 6.72 0.000 Intergenic Intergenic 805827 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr6-2062 chr6 112043630 112043840 + 6.72 0.000 Intergenic Intergenic -10340 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 CCN6 LIBC|PPAC|PPD|WISP-3|WISP3 cellular communication network factor 6 protein-coding chr7-8953 chr7 98160377 98160587 + 6.72 0.000 intron (NM_014916, intron 6 of 13) intron (NM_014916, intron 6 of 13) -51772 NM_177455 168620 Hs.511979 NM_177455 ENSG00000180535 BHLHA15 BHLHB8|MIST1 basic helix-loop-helix family member a15 protein-coding chr13-3908 chr13 54919568 54919778 + 6.72 0.000 Intergenic HERVK9-int|LTR|ERVK -254781 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr4-2496 chr4 15027959 15028169 + 6.72 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) 25583 NM_001177384 132864 Hs.656937 NM_182485 ENSG00000137449 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding chr3-5232 chr3 95908223 95908433 + 6.72 0.000 Intergenic Intergenic -225135 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr6-2009 chr6 34059617 34059827 + 6.72 0.000 intron (NM_000841, intron 4 of 10) intron (NM_000841, intron 4 of 10) 46245 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr3-7869 chr3 127016960 127017170 + 6.72 0.000 intron (NM_032242, intron 16 of 30) intron (NM_032242, intron 16 of 30) 28471 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr8-5839 chr8 5876264 5876474 + 6.72 0.000 Intergenic HERVK22-int|LTR|ERVK 530179 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr12-3614 chr12 68676165 68676375 + 6.72 0.000 intron (NR_038930, intron 2 of 2) AluSq|SINE|Alu 10589 NR_038930 100507250 Hs.600731 NR_038930 ENSG00000247363 LOC100507250 - uncharacterized LOC100507250 ncRNA chr19-2968 chr19 16064616 16064826 + 6.72 0.000 promoter-TSS (NR_146442) promoter-TSS (NR_146442) -966 NR_146442 105372292 Hs.635664 NR_146442 ENSG00000267517 LINC01855 - long intergenic non-protein coding RNA 1855 ncRNA chr20-1730 chr20 43916065 43916275 + 6.72 0.000 promoter-TSS (NM_001098796) promoter-TSS (NM_001098796) 40 NM_032883 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr3-4907 chr3 187810110 187810320 + 6.72 0.000 Intergenic Intergenic -64747 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr9-2734 chr9 94945465 94945675 + 6.72 0.000 promoter-TSS (NR_147613) promoter-TSS (NR_147613) -16 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr3-4670 chr3 42533461 42533671 + 6.72 0.000 promoter-TSS (NR_046654) promoter-TSS (NR_046654) -960 NR_046654 100874007 Hs.600642 NR_046654 VIPR1-AS1 - VIPR1 antisense RNA 1 ncRNA chr2-7591 chr2 25567516 25567726 + 6.72 0.000 intron (NM_001320937, intron 8 of 8) intron (NM_001320937, intron 8 of 8) 82601 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr12-6110 chr12 125185809 125186019 + 6.72 0.000 promoter-TSS (NM_001366854) promoter-TSS (NM_001366854) -472 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr15-5098 chr15 88691439 88691649 + 6.72 0.000 Intergenic MER103C|DNA|hAT-Charlie 52528 NM_001303236 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr17-5528 chr17 43099905 43100115 + 6.72 0.000 intron (NM_007299, intron 6 of 21) intron (NM_007299, intron 6 of 21) 24105 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr12-7127 chr12 47706567 47706777 + 6.72 0.000 promoter-TSS (NM_001146075) promoter-TSS (NM_001146075) -611 NM_001146076 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr10-3343 chr10 13362421 13362631 + 6.72 0.000 Intergenic AluJb|SINE|Alu -14228 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr11-6056 chr11 31107015 31107225 + 6.72 0.000 intron (NM_001367979, intron 12 of 38) intron (NM_001367979, intron 12 of 38) -114434 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr20-2081 chr20 18769078 18769288 + 6.72 0.000 Intergenic LTR40b|LTR|ERVL 24799 NR_026884 29075 Hs.584899 NM_014162 LINC00652 HSPC072 long intergenic non-protein coding RNA 652 ncRNA chr3-8161 chr3 33318298 33318508 + 6.72 0.000 intron (NR_146129, intron 4 of 15) MLT1J2-int|LTR|ERVL-MaLR 40961 NR_146123 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding chr8-7159 chr8 122874660 122874870 + 6.72 0.000 intron (NM_001362797, intron 3 of 4) MIRb|SINE|MIR 93110 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr21-419 chr21 46054892 46055102 + 6.72 0.000 Intergenic Intergenic -43115 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr20-4410 chr20 59378189 59378399 + 6.72 0.000 Intergenic Intergenic 77683 NM_001302455 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding chr22-2213 chr22 19808344 19808554 + 6.72 0.000 intron (NM_053004, intron 5 of 7) intron (NM_053004, intron 5 of 7) 46425 NM_024627 79680 Hs.105642 NM_024627 ENSG00000215012 RTL10 BOP|C22orf29 retrotransposon Gag like 10 protein-coding chr20-4278 chr20 49888336 49888546 + 6.72 0.000 non-coding (NR_048540, exon 12 of 12) non-coding (NR_048540, exon 12 of 12) 24582 NR_162136 113219455 NR_162136 MIR12122 - microRNA 12122 ncRNA chr1-11245 chr1 248212009 248212219 + 6.72 0.000 Intergenic Intergenic 9046 NM_001004689 127062 Hs.553581 NM_001004689 ENSG00000228198 OR2M3 OR1-54|OR2M3P|OR2M6|OST003 olfactory receptor family 2 subfamily M member 3 protein-coding chr9-8818 chr9 134925893 134926103 + 6.72 0.000 Intergenic HERVL-int|LTR|ERVL -8086 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr8-2560 chr8 36063904 36064114 + 6.72 0.000 Intergenic L2a|LINE|L2 -353689 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr14-4863 chr14 70399600 70399810 + 6.72 0.000 intron (NM_001202549, intron 1 of 4) MER61-int|LTR|ERV1 17385 NM_001202547 100529257 Hs.443661 NM_001202547 ENSG00000258644 SYNJ2BP-COX16 - SYNJ2BP-COX16 readthrough protein-coding chr3-5523 chr3 197356102 197356312 + 6.72 0.000 Intergenic AluSq|SINE|Alu -56886 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr1-13683 chr1 12457346 12457556 + 6.72 0.000 intron (NM_015378, intron 66 of 69) intron (NM_015378, intron 66 of 69) -49795 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr14-4379 chr14 27640834 27641044 + 6.72 0.000 intron (NR_148991, intron 2 of 2) L1PA7|LINE|L1 -7661 NR_130461 100422830 NR_130461 ENSG00000264657 MIR3171 - microRNA 3171 ncRNA chr19-5495 chr19 44664530 44664740 + 6.72 0.000 3' UTR (NM_006505, exon 8 of 8) 3' UTR (NM_006505, exon 8 of 8) -6817 NM_020219 56971 Hs.416925 NM_020219 ENSG00000186567 CEACAM19 CEACM19|CEAL1 carcinoembryonic antigen related cell adhesion molecule 19 protein-coding chr2-6425 chr2 146953492 146953702 + 6.72 0.000 Intergenic AluSq2|SINE|Alu 366540 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-9880 chr2 207156496 207156706 + 6.72 0.000 intron (NM_001270943, intron 1 of 3) intron (NM_001270943, intron 1 of 3) 9347 NM_003709 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr5-8764 chr5 147698378 147698588 + 6.72 0.000 intron (NM_001270934, intron 1 of 20) THE1C|LTR|ERVL-MaLR 84245 NM_001282282 9832 Hs.740461 NM_014790 ENSG00000176049 JAKMIP2 JAMIP2|NECC1 janus kinase and microtubule interacting protein 2 protein-coding chr5-2821 chr5 37448680 37448890 + 6.72 0.000 intron (NM_001345998, intron 7 of 17) L1MD3|LINE|L1 69467 NM_001345999 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr7-3873 chr7 105405071 105405281 + 6.72 0.000 Intergenic Intergenic -15786 NM_001350742 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr22-3811 chr22 30489750 30489960 + 6.72 0.000 3' UTR (NM_174977, exon 12 of 12) 3' UTR (NM_174977, exon 12 of 12) -8099 NR_001580 376844 Hs.534651 NR_001580 SDC4P - syndecan 4 pseudogene pseudo chr7-3927 chr7 128763608 128763818 + 6.72 0.000 intron (NM_001199673, intron 5 of 5) intron (NM_001199673, intron 5 of 5) 12077 NM_001708 611 Hs.656404 NM_001708 ENSG00000128617 OPN1SW BCP|BOP|CBT opsin 1, short wave sensitive protein-coding chrX-4370 chrX 50102005 50102215 + 6.72 0.000 Intergenic Intergenic 32609 NM_001282163 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr22-1650 chr22 38069304 38069514 + 6.72 0.000 intron (NM_001039584, intron 6 of 12) intron (NM_001039584, intron 6 of 12) 12005 NM_012407 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr12-4797 chr12 54563634 54563844 + 6.72 0.000 intron (NM_001165975, intron 1 of 14) MIRb|SINE|MIR 2274 NM_001315534 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding chr9-7520 chr9 33426976 33427186 + 6.72 0.000 Intergenic Intergenic 20512 NM_004925 360 Hs.234642 NM_004925 ENSG00000165272 AQP3 AQP-3|GIL aquaporin 3 (Gill blood group) protein-coding chr13-4395 chr13 109498695 109498905 + 6.72 0.000 Intergenic L2b|LINE|L2 98104 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr8-1176 chr8 32205747 32205957 + 6.72 0.000 intron (NM_013962, intron 1 of 4) AluJr|SINE|Alu 179634 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr20-3195 chr20 49113014 49113224 + 6.72 0.000 TTS (NM_017454) TTS (NM_017454) 66807 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chrX-5122 chrX 129438762 129438972 + 6.72 0.000 Intergenic Intergenic 84623 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr4-4552 chr4 72644294 72644504 + 6.72 0.000 Intergenic Intergenic -75178 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr1-11307 chr1 18196390 18196600 + 6.72 0.000 intron (NM_032880, intron 1 of 9) intron (NM_032880, intron 1 of 9) 88697 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr9-4268 chr9 99341782 99341992 + 6.72 0.000 Intergenic L1M7|LINE|L1 33370 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr15-4241 chr15 33214321 33214531 + 6.72 0.000 Intergenic Intergenic -19693 NM_001277313 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr13-1889 chr13 41041064 41041274 + 6.72 0.000 intron (NM_001370329, intron 1 of 9) L2a|LINE|L2 20217 NM_001370330 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr8-5148 chr8 79361367 79361577 + 6.72 0.000 Intergenic Intergenic 29284 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA chr8-6061 chr8 25294062 25294272 + 6.72 0.000 intron (NM_024940, intron 6 of 51) intron (NM_024940, intron 6 of 51) -51235 NR_106936 102465527 NR_106936 ENSG00000274988 MIR6876 hsa-mir-6876 microRNA 6876 ncRNA chr1-12725 chr1 57119512 57119722 + 6.72 0.000 intron (NM_001365793, intron 4 of 14) intron (NM_001365793, intron 4 of 14) -153477 NM_001278544 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr16-5965 chr16 4727474 4727684 + 6.72 0.000 intron (NR_040252, intron 2 of 16) MER20|DNA|hAT-Charlie 6692 NM_001324130 124401 Hs.654859 NM_133450 ENSG00000168096 ANKS3 - ankyrin repeat and sterile alpha motif domain containing 3 protein-coding chr7-6988 chr7 110376788 110376998 + 6.72 0.000 Intergenic L2a|LINE|L2 -416680 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr20-4076 chr20 39042424 39042634 + 6.72 0.000 Intergenic Intergenic 80185 NR_033905 60625 Hs.444520 NM_021931 ENSG00000101452 DHX35 C20orf15|DDX35|KAIA0875 DEAH-box helicase 35 protein-coding chr1-11817 chr1 29050397 29050607 + 6.72 0.000 intron (NM_001166007, intron 11 of 17) intron (NM_001166007, intron 11 of 17) 71999 NM_001171868 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr6-6892 chr6 12653003 12653213 + 6.72 0.000 Intergenic Intergenic -63659 NM_001322308 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr6-5623 chr6 51611446 51611656 + 6.72 0.000 Intergenic MER115|DNA|hAT-Tip100 -10319 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr20-1970 chr20 37068514 37068724 + 6.72 0.000 intron (NM_002895, intron 2 of 21) intron (NM_002895, intron 2 of 21) 27378 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr12-6381 chr12 68186140 68186350 + 6.72 0.000 Intergenic LTR79|LTR|ERVL -26505 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr9-6931 chr9 95638829 95639039 + 6.72 0.000 Intergenic L1ME4a|LINE|L1 -121877 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr15-5169 chr15 92560781 92560991 + 6.72 0.000 Intergenic Intergenic 11377 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 - long intergenic non-protein coding RNA 930 ncRNA chr15-3207 chr15 72722180 72722390 + 6.72 0.000 intron (NM_033028, intron 6 of 15) intron (NM_033028, intron 6 of 15) 36078 NM_033028 585 Hs.208681 NM_033028 ENSG00000140463 BBS4 - Bardet-Biedl syndrome 4 protein-coding chr10-7741 chr10 32681278 32681488 + 6.72 0.000 intron (NM_001321115, intron 22 of 43) MER76|LTR|ERVL 220089 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr6-7930 chr6 110363758 110363968 + 6.72 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -5591 NM_001123364 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr16-5336 chr16 82328948 82329158 + 6.72 0.000 Intergenic Intergenic -158829 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr8-5160 chr8 86822271 86822481 + 6.72 0.000 Intergenic THE1D|LTR|ERVL-MaLR -44039 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr18-1704 chr18 2036249 2036459 + 6.72 0.000 Intergenic Intergenic 535151 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr12-6917 chr12 24293496 24293706 + 6.72 0.000 intron (NM_152989, intron 3 of 17) intron (NM_152989, intron 3 of 17) 70330 NR_120472 101928471 Hs.569156 NR_120472 ENSG00000256120 SOX5-AS1 - SOX5 antisense RNA 1 ncRNA chr2-6071 chr2 156483845 156484055 + 6.72 0.000 intron (NM_000408, intron 2 of 16) intron (NM_000408, intron 2 of 16) 47571 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr9-5372 chr9 91218945 91219155 + 6.72 0.000 intron (NM_001698, intron 7 of 9) intron (NM_001698, intron 7 of 9) 99988 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr1-16220 chr1 209082632 209082842 + 6.72 0.000 Intergenic Intergenic 110283 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr20-1840 chr20 4805674 4805884 + 6.72 0.000 intron (NM_014737, intron 2 of 11) intron (NM_014737, intron 2 of 11) 9344 NM_170774 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr13-3306 chr13 52085493 52085703 + 6.72 0.000 intron (NM_199289, intron 16 of 21) MamRep137|DNA|TcMar-Tigger -43297 NR_110306 101929657 Hs.637461 NR_110306 ENSG00000273523 LOC101929657 - uncharacterized LOC101929657 ncRNA chr17-6344 chr17 75525647 75525857 + 6.72 0.000 promoter-TSS (NM_001031803) promoter-TSS (NM_001031803) 50 NM_001015002 3993 Hs.514477 NM_004524 ENSG00000073350 LLGL2 HGL|Hugl-2|LGL2 LLGL scribble cell polarity complex component 2 protein-coding chr6-4955 chr6 102913830 102914040 + 6.72 0.000 Intergenic Intergenic 1514950 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr1-8708 chr1 228020343 228020553 + 6.72 0.000 intron (NM_033131, intron 1 of 3) intron (NM_033131, intron 1 of 3) 13450 NM_033131 89780 Hs.336930 NM_033131 ENSG00000154342 WNT3A - Wnt family member 3A protein-coding chr6-3431 chr6 128597128 128597338 + 6.72 0.000 Intergenic Intergenic -76634 NM_001291982 5796 Hs.155919 NM_002844 ENSG00000152894 PTPRK R-PTP-kappa protein tyrosine phosphatase receptor type K protein-coding chr5-8324 chr5 117457051 117457261 + 6.72 0.000 intron (NR_046089, intron 2 of 5) intron (NR_046089, intron 2 of 5) 41644 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr18-3520 chr18 75113113 75113323 + 6.72 0.000 Intergenic Intergenic 92295 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr1-16334 chr1 217984982 217985192 + 6.72 0.000 Intergenic Intergenic -58418 NR_110794 101929631 Hs.407614 NR_110794 ENSG00000232100 LINC01653 - long intergenic non-protein coding RNA 1653 ncRNA chr13-2672 chr13 85450368 85450578 + 6.72 0.000 intron (NR_046989, intron 1 of 3) intron (NR_046989, intron 1 of 3) 86870 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr19-5528 chr19 49630824 49631034 + 6.72 0.000 Intergenic Intergenic 9214 NM_006270 6237 Hs.515536 NM_006270 ENSG00000126458 RRAS R-Ras RAS related protein-coding chr14-3729 chr14 31003345 31003555 + 6.72 0.000 intron (NM_001083893, intron 1 of 17) MSTB1|LTR|ERVL-MaLR 11292 NR_030354 693209 NR_030354 ENSG00000207952 MIR624 MIRN624|hsa-mir-624|mir-624 microRNA 624 ncRNA chr3-8682 chr3 183123950 183124160 + 6.72 0.000 3' UTR (NM_014398, exon 6 of 6) 3' UTR (NM_014398, exon 6 of 6) -24468 NR_120639 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding chr3-7611 chr3 16069091 16069301 + 6.72 0.000 Intergenic Intergenic -105484 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr7-6398 chr7 153388649 153388859 + 6.72 0.000 Intergenic Intergenic 23480 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr2-11667 chr2 7267392 7267602 + 6.72 0.000 Intergenic Intergenic -153764 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr3-10807 chr3 161087281 161087491 + 6.72 0.000 intron (NM_033168, intron 3 of 3) intron (NM_033168, intron 3 of 3) 17346 NM_001349161 8706 Hs.418062 NM_003781 ENSG00000169255 B3GALNT1 B3GALT3|GLCT3|GLOB|Gb4Cer|P|P1|beta3Gal-T3|galT3 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) protein-coding chr6-5041 chr6 111985383 111985593 + 6.72 0.000 Intergenic Intergenic -68587 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 CCN6 LIBC|PPAC|PPD|WISP-3|WISP3 cellular communication network factor 6 protein-coding chr7-8623 chr7 69564617 69564827 + 6.72 0.000 Intergenic Intergenic 32902 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr1-6996 chr1 168081631 168081841 + 6.72 0.000 3' UTR (NM_001349634, exon 8 of 8) 3' UTR (NM_001349634, exon 8 of 8) 54700 NM_001267612 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr7-3693 chr7 50954734 50954944 + 6.72 0.000 Intergenic Intergenic -161386 NM_001371008 chr7-5115 chr7 4433991 4434201 + 6.72 0.000 Intergenic Intergenic -248199 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr13-3506 chr13 21011588 21011798 + 6.72 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 49893 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr14-2974 chr14 50982370 50982580 + 6.72 0.000 intron (NM_015163, intron 7 of 9) intron (NM_015163, intron 7 of 9) -37992 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr2-13155 chr2 119438976 119439186 + 6.72 0.000 TTS (NM_002980) TTS (NM_002980) 7227 NM_183240 140738 Hs.26216 NM_183240 ENSG00000171227 TMEM37 PR|PR1 transmembrane protein 37 protein-coding chr4-2380 chr4 23696227 23696437 + 6.72 0.000 Intergenic Intergenic 184960 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr9-8167 chr9 105401592 105401802 + 6.72 0.000 intron (NM_001330731, intron 15 of 15) intron (NM_001330731, intron 15 of 15) -46337 NM_001287191 83856 Hs.136901 NM_031919 ENSG00000106701 FSD1L CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1 fibronectin type III and SPRY domain containing 1 like protein-coding chr5-7034 chr5 165728449 165728659 + 6.72 0.000 Intergenic Intergenic 1197816 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr14-5166 chr14 91410058 91410268 + 6.72 0.000 intron (NM_001080414, intron 2 of 29) intron (NM_001080414, intron 2 of 29) 7657 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr2-12221 chr2 43293780 43293990 + 6.72 0.000 intron (NM_001083953, intron 31 of 37) L3|LINE|CR1 66674 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr14-5222 chr14 96773881 96774091 + 6.72 0.000 intron (NR_146552, intron 3 of 3) intron (NR_146552, intron 3 of 3) -23396 NM_003384 7443 Hs.422662 NM_003384 ENSG00000100749 VRK1 PCH1|PCH1A VRK serine/threonine kinase 1 protein-coding chr17-7558 chr17 19565854 19566064 + 6.72 0.000 intron (NM_018242, intron 12 of 16) MER44D|DNA|TcMar-Tigger 8399 NR_003022 677882 Hs.658450 NR_003022 ENSG00000266079 SNORA59B ACA59 small nucleolar RNA, H/ACA box 59B snoRNA chr19-5783 chr19 32746045 32746255 + 6.72 0.000 intron (NM_001366102, intron 4 of 32) intron (NM_001366102, intron 4 of 32) 26383 NM_001366102 91646 Hs.646351 NM_001015890 ENSG00000173809 TDRD12 ECAT8 tudor domain containing 12 protein-coding chr3-7773 chr3 71972000 71972210 + 6.72 0.000 Intergenic Intergenic 128350 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr2-9827 chr2 149934734 149934944 + 6.72 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -75648 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr21-1073 chr21 31867414 31867624 + 6.72 0.000 Intergenic Intergenic -5501 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr5-7012 chr5 156380852 156381062 + 6.72 0.000 intron (NM_001128209, intron 2 of 7) intron (NM_001128209, intron 2 of 7) 53793 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr14-4710 chr14 58793133 58793343 + 6.72 0.000 Intergenic LTR103b_Mam|LTR|ERV1? -35050 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr12-5940 chr12 75960241 75960451 + 6.72 0.000 Intergenic Intergenic 71430 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr6-4015 chr6 122007504 122007714 + 6.72 0.000 Intergenic Intergenic -391942 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr2-9436 chr2 233442158 233442368 + 6.72 0.000 intron (NM_152879, intron 10 of 29) intron (NM_152879, intron 10 of 29) 54109 NM_003648 8527 Hs.471675 NM_003648 ENSG00000077044 DGKD DGKdelta|dgkd-2 diacylglycerol kinase delta protein-coding chr1-8183 chr1 19799246 19799456 + 6.72 0.000 promoter-TSS (NM_001349115) promoter-TSS (NM_001349115) -2 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr15-3944 chr15 41184940 41185150 + 6.72 0.000 intron (NM_152596, intron 9 of 9) intron (NM_152596, intron 9 of 9) 45712 NM_001286441 161829 Hs.307999 NM_152596 ENSG00000178997 EXD1 EXDL1 exonuclease 3'-5' domain containing 1 protein-coding chr14-4491 chr14 36676184 36676394 + 6.72 0.000 exon (NM_006194, exon 5 of 5) exon (NM_006194, exon 5 of 5) 18721 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chrX-4857 chrX 104743814 104744024 + 6.72 0.000 intron (NM_017416, intron 2 of 10) MamSINE1|SINE|tRNA-RTE 177720 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr1-12667 chr1 45629693 45629903 + 6.72 0.000 intron (NM_021639, intron 11 of 12) intron (NM_021639, intron 11 of 12) -5744 NM_001114938 149483 Hs.18912 NM_152500 ENSG00000159588 CCDC17 - coiled-coil domain containing 17 protein-coding chr3-6442 chr3 103963521 103963731 + 6.72 0.000 Intergenic L1M2|LINE|L1 -439510 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr3-5059 chr3 41519853 41520063 + 6.72 0.000 intron (NR_136342, intron 30 of 34) intron (NR_136342, intron 30 of 34) 320453 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr19-6680 chr19 35277137 35277347 + 6.72 0.000 intron (NM_001321150, intron 5 of 7) intron (NM_001321150, intron 5 of 7) -5286 NM_021175 57817 Hs.8821 NM_021175 ENSG00000105697 HAMP HEPC|HFE2B|LEAP1|PLTR hepcidin antimicrobial peptide protein-coding chr1-14354 chr1 41510453 41510663 + 6.72 0.000 exon (NM_001127714, exon 8 of 8) exon (NM_001127714, exon 8 of 8) -25875 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr21-1840 chr21 41548807 41549017 + 6.72 0.000 Intergenic Charlie2b|DNA|hAT-Charlie -40754 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr9-6107 chr9 138015292 138015502 + 6.72 0.000 intron (NM_001243812, intron 18 of 45) intron (NM_001243812, intron 18 of 45) 29674 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chr3-6860 chr3 150928167 150928377 + 6.72 0.000 intron (NM_052995, intron 2 of 3) intron (NM_052995, intron 2 of 3) 15964 NM_052995 7401 Hs.745448 NM_052995 ENSG00000163646 CLRN1 RP61|USH3|USH3A clarin 1 protein-coding chr1-7455 chr1 60879057 60879267 + 6.72 0.000 Intergenic Intergenic -53578 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr10-2392 chr10 116849101 116849311 + 6.72 0.000 promoter-TSS (NM_001242699) promoter-TSS (NM_001242699) -293 NM_001242699 387712 Hs.693248 NM_001242699 ENSG00000188316 ENO4 C10orf134 enolase 4 protein-coding chr2-6112 chr2 208828902 208829112 + 6.72 0.000 Intergenic Intergenic 286365 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr11-9613 chr11 65705137 65705347 + 6.72 0.000 Intergenic THE1D|LTR|ERVL-MaLR -7010 NM_006388 10524 Hs.397010 NM_006388 ENSG00000172977 KAT5 ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 lysine acetyltransferase 5 protein-coding chr5-8602 chr5 138514303 138514513 + 6.72 0.000 intron (NM_001364160, intron 4 of 10) AluJb|SINE|Alu 27303 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr8-2510 chr8 20261383 20261593 + 6.72 0.000 intron (NM_021020, intron 1 of 3) intron (NM_021020, intron 1 of 3) 12047 NM_001362884 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chrX-5112 chrX 128408528 128408738 + 6.72 0.000 Intergenic Intergenic -356230 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr9-5061 chr9 33272441 33272651 + 6.72 0.000 intron (NM_001195536, intron 5 of 6) AluY|SINE|Alu 7497 NM_016410 51510 Hs.635313 NM_016410 ENSG00000086065 CHMP5 C9orf83|CGI-34|HSPC177|PNAS-2|SNF7DC2|Vps60 charged multivesicular body protein 5 protein-coding chr10-7137 chr10 100654365 100654575 + 6.72 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -80926 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr19-4726 chr19 19356853 19357063 + 6.72 0.000 3' UTR (NM_015329, exon 19 of 19) 3' UTR (NM_015329, exon 19 of 19) -28845 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr4-3700 chr4 57037927 57038137 + 6.72 0.000 intron (NM_001553, intron 2 of 4) intron (NM_001553, intron 2 of 4) 59136 NM_000938 5431 Hs.602757 NM_000938 ENSG00000047315 POLR2B POL2RB|RPB2|hRPB140 RNA polymerase II subunit B protein-coding chr17-6902 chr17 33934896 33935106 + 6.72 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 221805 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr9-7016 chr9 117601945 117602155 + 6.72 0.000 Intergenic AluSx4|SINE|Alu -46556 NR_109806 101928797 Hs.382317 NR_109806 ENSG00000233569 LOC101928797 - uncharacterized LOC101928797 ncRNA chr11-7595 chr11 41981901 41982111 + 6.72 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 103452 NR_135065 101928591 Hs.149771 NR_135065 LINC02745 - long intergenic non-protein coding RNA 2745 ncRNA chr5-5593 chr5 150478662 150478872 + 6.72 0.000 intron (NR_105061, intron 2 of 2) AluJb|SINE|Alu 7225 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chr2-13463 chr2 146334587 146334797 + 6.72 0.000 Intergenic L1MB8|LINE|L1 -252365 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr10-6803 chr10 12786995 12787205 + 6.72 0.000 intron (NM_001351032, intron 7 of 11) AluSx|SINE|Alu -61747 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr12-6054 chr12 112740876 112741086 + 6.72 0.000 intron (NM_001347952, intron 1 of 21) LTR85c|LTR|Gypsy? -45805 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr1-7994 chr1 206969471 206969681 + 6.72 0.000 intron (NM_001122979, intron 2 of 7) intron (NM_001122979, intron 2 of 7) 884 NM_001122979 83953 Hs.145519 NM_032029 ENSG00000162897 FCAMR CD351|FCA/MR|FKSG87 Fc fragment of IgA and IgM receptor protein-coding chr2-9425 chr2 232494544 232494754 + 6.72 0.000 Intergenic Intergenic -6815 NM_001290787 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr2-9621 chr2 7034451 7034661 + 6.72 0.000 intron (NM_001349181, intron 8 of 9) intron (NM_001349181, intron 8 of 9) 43324 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr1-15153 chr1 106526462 106526672 + 6.72 0.000 Intergenic LTR8B|LTR|ERV1 -291672 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr4-3716 chr4 71909249 71909459 + 6.72 0.000 Intergenic LTR35|LTR|ERV1 -103834 NM_001204306 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr2-11905 chr2 24269256 24269466 + 6.72 0.000 intron (NM_001348182, intron 19 of 38) L2c|LINE|L2 91175 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chrX-2358 chrX 65941453 65941663 + 6.72 0.000 Intergenic AluSz|SINE|Alu -77312 NR_029637 407008 NR_029637 ENSG00000284567 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA chr3-10549 chr3 140739112 140739322 + 6.72 0.000 Intergenic Intergenic 61153 NM_152616 287015 Hs.343487 NM_152616 ENSG00000155890 TRIM42 PPP1R40|T4A1 tripartite motif containing 42 protein-coding chr22-2954 chr22 49530927 49531137 + 6.72 0.000 intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) 12434 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr11-5064 chr11 109387950 109388160 + 6.72 0.000 Intergenic MER20|DNA|hAT-Charlie -34135 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr10-8682 chr10 101123438 101123648 + 6.72 0.000 intron (NR_130724, intron 2 of 2) CpG 7603 NR_130723 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr7-6130 chr7 122975591 122975801 + 6.72 0.000 Intergenic Intergenic 20004 NM_016945 50833 Hs.272395 NM_016945 ENSG00000128519 TAS2R16 BGLPT|T2R16 taste 2 receptor member 16 protein-coding chr10-9144 chr10 128060113 128060323 + 6.72 0.000 intron (NR_136149, intron 2 of 3) (AC)n|Simple_repeat|Simple_repeat 2207 NR_136149 105378553 NR_136149 AS-PTPRE - lncRNA antisense to PTPRE protein-coding gene ncRNA chr1-9509 chr1 38298092 38298302 + 6.72 0.000 Intergenic MER70A|LTR|ERVL -83430 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA chr15-3345 chr15 82009700 82009910 + 6.72 0.000 Intergenic Intergenic 36213 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr8-5580 chr8 87056084 87056294 + 6.72 0.000 intron (NM_173538, intron 4 of 10) MER91A|DNA|hAT-Tip100 189774 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr7-8090 chr7 25315809 25316019 + 6.72 0.000 Intergenic Intergenic -87428 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr19-4679 chr19 17656080 17656290 + 6.72 0.000 exon (NM_001080421, exon 10 of 42) exon (NM_001080421, exon 10 of 42) 32014 NM_001080421 23025 Hs.164502 NM_001080421 ENSG00000130477 UNC13A Munc13-1 unc-13 homolog A protein-coding chr13-4128 chr13 82094279 82094489 + 6.72 0.000 Intergenic L1PA15|LINE|L1 -867401 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr3-10756 chr3 156428592 156428802 + 6.72 0.000 intron (NM_172159, intron 2 of 13) intron (NM_172159, intron 2 of 13) 18239 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr4-4326 chr4 32806301 32806511 + 6.72 0.000 Intergenic MLT2A1|LTR|ERVL 455368 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr5-2725 chr5 122312118 122312328 + 6.72 0.000 promoter-TSS (NM_005460) promoter-TSS (NM_005460) -14 NM_001308109 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr3-6405 chr3 99393971 99394181 + 6.72 0.000 Intergenic Intergenic -244518 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr19-1933 chr19 6393822 6394032 + 6.72 0.000 promoter-TSS (NM_002096) promoter-TSS (NM_002096) -763 NM_002096 2962 Hs.68257 NM_002096 ENSG00000125651 GTF2F1 BTF4|RAP74|TF2F1|TFIIF general transcription factor IIF subunit 1 protein-coding chrX-4210 chrX 36969138 36969348 + 6.72 0.000 Intergenic Intergenic -39116 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr10-6409 chr10 8351961 8352171 + 6.72 0.000 Intergenic Intergenic -83761 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chr1-15227 chr1 111764628 111764838 + 6.72 0.000 intron (NM_007204, intron 10 of 10) intron (NM_007204, intron 10 of 10) 8832 NM_007204 11218 Hs.591405 NM_007204 ENSG00000064703 DDX20 DP103|GEMIN3 DEAD-box helicase 20 protein-coding chr4-7084 chr4 32086668 32086878 + 6.72 0.000 intron (NR_125936, intron 1 of 2) MER52-int|LTR|ERV1 -64351 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA chr7-5372 chr7 31457553 31457763 + 6.72 0.000 Intergenic Intergenic -56413 NM_001257967 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr14-4821 chr14 68822206 68822416 + 6.72 0.000 Intergenic Intergenic -26068 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr3-7672 chr3 38453694 38453904 + 6.72 0.000 promoter-TSS (NM_001106) promoter-TSS (NM_001106) -91 NM_001106 93 Hs.174273 NM_001106 ENSG00000114739 ACVR2B ACTRIIB|ActR-IIB|HTX4 activin A receptor type 2B protein-coding chr13-2512 chr13 59260089 59260299 + 6.72 0.000 Intergenic Intergenic -752524 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr3-10678 chr3 150697615 150697825 + 6.72 0.000 intron (NM_001308234, intron 3 of 13) L2-3_Crp|LINE|L2 -5844 NR_121675 101928085 Hs.561114 NR_121674 ENSG00000240137 ERICH6-AS1 - ERICH6 antisense RNA 1 ncRNA chr5-4668 chr5 37717539 37717749 + 6.72 0.000 intron (NM_001345998, intron 13 of 17) intron (NM_001345998, intron 13 of 17) 117178 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr16-6237 chr16 29318195 29318405 + 6.72 0.000 intron (NR_002939, intron 2 of 8) intron (NR_002939, intron 2 of 8) 16013 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr21-1441 chr21 28215028 28215238 + 6.72 0.000 intron (NR_126012, intron 2 of 5) intron (NR_126012, intron 2 of 5) 13534 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA chr6-8033 chr6 119396156 119396366 + 6.72 0.000 Intergenic MER52-int|LTR|ERV1 -46500 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chrX-4314 chrX 44729307 44729517 + 6.72 0.000 Intergenic L1MC4|LINE|L1 -114609 NM_022076 63904 Hs.534478 NM_022076 ENSG00000189037 DUSP21 LMWDSP21 dual specificity phosphatase 21 protein-coding chr6-6818 chr6 6921545 6921755 + 6.72 0.000 Intergenic Intergenic -186093 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr19-1471 chr19 2702714 2702924 + 6.72 0.000 promoter-TSS (NM_052847) promoter-TSS (NM_052847) -125 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr15-5027 chr15 83009431 83009641 + 6.72 0.000 intron (NR_027650, intron 2 of 3) intron (NR_027650, intron 2 of 3) 2103 NR_027649 123207 Hs.352541 NM_144597 ENSG00000169609 C15orf40 - chromosome 15 open reading frame 40 protein-coding chr15-3354 chr15 83094756 83094966 + 6.72 0.000 Intergenic Intergenic -12784 NM_001353881 53346 Hs.513094 NM_023003 ENSG00000136404 TM6SF1 - transmembrane 6 superfamily member 1 protein-coding chr7-7376 chr7 66476180 66476390 + 6.72 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -17347 NR_134573 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr2-5914 chr2 10377435 10377645 + 6.72 0.000 intron (NM_001258359, intron 1 of 4) intron (NM_001258359, intron 1 of 4) 8776 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr11-6163 chr11 44316723 44316933 + 6.72 0.000 Intergenic CpG -6689 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr12-6652 chr12 851456 851666 + 6.72 0.000 intron (NM_001184985, intron 4 of 27) intron (NM_001184985, intron 4 of 27) 81515 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr9-4612 chr9 107043581 107043791 + 6.72 0.000 intron (NR_126029, intron 4 of 4) AluSx1|SINE|Alu 59302 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr3-10796 chr3 159874679 159874889 + 6.72 0.000 intron (NM_001197113, intron 6 of 10) intron (NM_001197113, intron 6 of 10) 34923 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr8-5972 chr8 21361943 21362153 + 6.72 0.000 Intergenic Intergenic 63809 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA chr2-13603 chr2 158700756 158700966 + 6.72 0.000 intron (NR_135242, intron 1 of 3) MER44A|DNA|TcMar-Tigger 34141 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr3-9796 chr3 72945274 72945484 + 6.72 0.000 intron (NM_001080393, intron 3 of 6) L2a|LINE|L2 -51364 NM_001318026 151987 Hs.431092 NM_174907 ENSG00000163605 PPP4R2 PP4R2 protein phosphatase 4 regulatory subunit 2 protein-coding chr1-15416 chr1 152104296 152104506 + 6.72 0.000 Intergenic Intergenic 11053 NM_007113 7062 Hs.432416 NM_007113 ENSG00000159450 TCHH THH|THL|TRHY|UHS3 trichohyalin protein-coding chr3-6198 chr3 61648113 61648323 + 6.72 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 86647 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr12-7439 chr12 61620965 61621175 + 6.72 0.000 Intergenic L1MA4A|LINE|L1 571769 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr20-4366 chr20 56525187 56525397 + 6.72 0.000 intron (NM_001012971, intron 1 of 1) intron (NM_001012971, intron 1 of 1) 563 NM_001012971 200232 Hs.504907 NM_001012971 ENSG00000124103 FAM209A C20orf106|dJ1153D9.3 family with sequence similarity 209 member A protein-coding chr10-6313 chr10 105403132 105403342 + 6.72 0.000 Intergenic L1MC1|LINE|L1 417096 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr14-3767 chr14 52522976 52523186 + 6.72 0.000 intron (NM_020784, intron 6 of 20) intron (NM_020784, intron 6 of 20) 29424 NM_020784 57544 Hs.532609 NM_020784 ENSG00000087301 TXNDC16 ERp90|KIAA1344 thioredoxin domain containing 16 protein-coding chr21-1450 chr21 31714790 31715000 + 6.72 0.000 intron (NM_020706, intron 1 of 19) intron (NM_020706, intron 1 of 19) 17223 NM_001145445 57466 Hs.17255 NM_020706 ENSG00000156304 SCAF4 SFRS15|SRA4 SR-related CTD associated factor 4 protein-coding chr12-6052 chr12 112603129 112603339 + 6.72 0.000 intron (NM_001347952, intron 1 of 21) LTR48B|LTR|ERV1 27998 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr5-8585 chr5 137850572 137850782 + 6.72 0.000 Intergenic MIR|SINE|MIR -17179 NM_006790 9499 Hs.84665 NM_006790 ENSG00000120729 MYOT LGMD1|LGMD1A|MFM3|TTID|TTOD myotilin protein-coding chr10-4024 chr10 12161369 12161579 + 6.72 0.000 intron (NM_001142627, intron 10 of 11) AluSc5|SINE|Alu -30658 NR_039699 100616488 NR_039699 ENSG00000265653 MIR548AK - microRNA 548ak ncRNA chr16-2299 chr16 11784831 11785041 + 6.72 0.000 intron (NM_014153, intron 1 of 22) AluSq|SINE|Alu 12322 NM_014153 29066 Hs.371856 NM_014153 ENSG00000122299 ZC3H7A HSPC055|ZC3H7|ZC3HDC7 zinc finger CCCH-type containing 7A protein-coding chr4-6333 chr4 92844824 92845034 + 6.72 0.000 intron (NM_001286838, intron 2 of 14) Charlie1a|DNA|hAT-Charlie 540530 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr1-14123 chr1 31520980 31521190 + 6.72 0.000 intron (NR_027085, intron 2 of 2) intron (NR_027085, intron 2 of 2) 2650 NR_027085 284551 Hs.658659 NR_027085 LINC01226 - long intergenic non-protein coding RNA 1226 ncRNA chr9-6216 chr9 107437754 107437964 + 6.72 0.000 intron (NR_121581, intron 4 of 7) AluSx|SINE|Alu 28726 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr3-9216 chr3 37718495 37718705 + 6.72 0.000 intron (NM_002207, intron 18 of 27) intron (NM_002207, intron 18 of 27) 143180 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr3-10856 chr3 167651456 167651666 + 6.72 0.000 intron (NM_001348951, intron 2 of 18) intron (NM_001348951, intron 2 of 18) 2381 NM_001366157 151790 Hs.213762 NM_178824 ENSG00000174776 WDR49 - WD repeat domain 49 protein-coding chr11-8985 chr11 22218408 22218618 + 6.72 0.000 intron (NM_001142649, intron 4 of 21) intron (NM_001142649, intron 4 of 21) 25337 NM_213599 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr13-3143 chr13 90854681 90854891 + 6.72 0.000 Intergenic MIR|SINE|MIR 71811 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr15-3856 chr15 88312911 88313121 + 6.72 0.000 Intergenic Intergenic -56277 NM_002530 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr3-8431 chr3 113649553 113649763 + 6.72 0.000 non-coding (NR_111981, exon 7 of 7) non-coding (NR_111981, exon 7 of 7) 46984 NM_001009899 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr14-4059 chr14 58492157 58492367 + 6.72 0.000 exon (NM_001364701, exon 26 of 31) exon (NM_001364701, exon 26 of 31) 52581 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr1-5492 chr1 154993313 154993523 + 6.72 0.000 promoter-TSS (NM_018655) promoter-TSS (NM_018655) -168 NM_018655 55891 Hs.272399 NM_018655 ENSG00000163352 LENEP LEP503 lens epithelial protein protein-coding chr22-2407 chr22 17725023 17725233 + 6.72 0.000 intron (NM_001270733, intron 1 of 1) intron (NM_001270733, intron 1 of 1) 18470 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr19-4575 chr19 11262600 11262810 + 6.72 0.000 promoter-TSS (NM_020812) promoter-TSS (NM_020812) -181 NM_001367830 57572 Hs.591002 NM_020812 ENSG00000130158 DOCK6 AOS2|ZIR1 dedicator of cytokinesis 6 protein-coding chrX-5044 chrX 122943993 122944203 + 6.72 0.000 Intergenic Intergenic -240145 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr11-7123 chr11 125092500 125092710 + 6.72 0.000 Intergenic Intergenic 19021 NM_001258239 219854 Hs.7626 NM_001080546 ENSG00000150433 TMEM218 - transmembrane protein 218 protein-coding chr6-4660 chr6 51460405 51460615 + 6.72 0.000 Intergenic Intergenic -161360 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr7-3991 chr7 138427244 138427454 + 6.72 0.000 Intergenic AluSc|SINE|Alu -32910 NM_015905 8805 Hs.490287 NM_003852 ENSG00000122779 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding chr5-6488 chr5 178146149 178146359 + 6.72 0.000 exon (NM_022762, exon 8 of 11) exon (NM_022762, exon 8 of 11) 7706 NM_017838 55651 Hs.744074 NM_017838 ENSG00000145912 NHP2 DKCB2|NHP2P|NOLA2 NHP2 ribonucleoprotein protein-coding chr5-7052 chr5 169998847 169999057 + 6.72 0.000 intron (NR_156756, intron 31 of 52) intron (NR_156756, intron 31 of 52) -18457 NM_001129891 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr2-13319 chr2 131646902 131647112 + 6.72 0.000 intron (NR_108087, intron 1 of 1) CpG 9982 NR_108087 101927994 Hs.635757 NR_108087 ENSG00000224559 LINC01087 - long intergenic non-protein coding RNA 1087 ncRNA chr2-10685 chr2 24987667 24987877 + 6.72 0.000 intron (NR_034113, intron 1 of 2) intron (NR_034113, intron 1 of 2) 15660 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 - DNAJC27 antisense RNA 1 ncRNA chr18-1570 chr18 32934354 32934564 + 6.72 0.000 Intergenic Intergenic -161436 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr6-4880 chr6 89953624 89953834 + 6.72 0.000 intron (NM_021813, intron 6 of 8) intron (NM_021813, intron 6 of 8) 59260 NM_032602 84694 Hs.334499 NM_032602 ENSG00000135355 GJA10 CX62 gap junction protein alpha 10 protein-coding chrX-3480 chrX 36738595 36738805 + 6.72 0.000 Intergenic Intergenic -269659 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr1-13904 chr1 22102554 22102764 + 6.72 0.000 Intergenic Intergenic 40438 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr2-11979 chr2 27197606 27197816 + 6.72 0.000 Intergenic Intergenic -14320 NM_080592 51374 Hs.9527 NM_016085 ENSG00000138085 ATRAID APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18 all-trans retinoic acid induced differentiation factor protein-coding chr9-4094 chr9 129092658 129092868 + 6.72 0.000 Intergenic AluSq2|SINE|Alu 11652 NR_072983 57171 Hs.21701 NM_020438 ENSG00000167130 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding chr4-6299 chr4 84530996 84531206 + 6.72 0.000 Intergenic AluJb|SINE|Alu -32867 NM_006168 4825 Hs.546270 NM_006168 ENSG00000163623 NKX6-1 NKX6.1|NKX6A NK6 homeobox 1 protein-coding chr12-5150 chr12 100669052 100669262 + 6.72 0.000 Intergenic Intergenic 75539 NM_001303131 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr8-4050 chr8 62141799 62142009 + 6.72 0.000 Intergenic L4_B_Mam|LINE|RTE-X -106950 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr10-7932 chr10 52158403 52158613 + 6.72 0.000 intron (NM_001098512, intron 8 of 17) intron (NM_001098512, intron 8 of 17) 155620 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr6-2590 chr6 82025406 82025616 + 6.72 0.000 intron (NR_149135, intron 3 of 3) MLT1N2|LTR|ERVL-MaLR 76254 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr9-7444 chr9 26260403 26260613 + 6.72 0.000 Intergenic MIRb|SINE|MIR 193833 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr22-2164 chr22 43066895 43067105 + 6.72 0.000 intron (NR_027779, intron 6 of 11) AluSx1|SINE|Alu 22391 NM_012263 25809 Hs.660298 NM_012263 ENSG00000100271 TTLL1 C22orf7|HS323M22B tubulin tyrosine ligase like 1 protein-coding chr3-9966 chr3 95902607 95902817 + 6.72 0.000 Intergenic L1PREC2|LINE|L1 -219519 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr1-10465 chr1 161879427 161879637 + 6.72 0.000 intron (NM_007348, intron 14 of 15) L2c|LINE|L2 113212 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chr2-6628 chr2 240291720 240291930 + 6.72 0.000 Intergenic Intergenic -143838 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr1-11178 chr1 240074589 240074799 + 6.72 0.000 Intergenic Intergenic -17189 NM_020066 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr4-4195 chr4 12232595 12232805 + 6.72 0.000 intron (NR_125910, intron 1 of 3) intron (NR_125910, intron 1 of 3) 9249 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr1-7190 chr1 212558406 212558616 + 6.72 0.000 Intergenic CpG -6823 NM_001030287 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chrX-2562 chrX 101348041 101348251 + 6.72 0.000 3' UTR (NM_001145951, exon 2 of 2) 3' UTR (NM_001145951, exon 2 of 2) 596 NM_001145951 1678 Hs.447877 NM_004085 ENSG00000126953 TIMM8A DDP|DDP1|DFN1|MTS|TIM8 translocase of inner mitochondrial membrane 8A protein-coding chr20-3345 chr20 30281865 30282075 + 6.72 0.000 non-coding (NR_145432, exon 2 of 2) non-coding (NR_145432, exon 2 of 2) 4567 NR_145432 400841 Hs.516959 NM_207470 LINC01597 - long intergenic non-protein coding RNA 1597 ncRNA chr15-4146 chr15 86594042 86594252 + 6.72 0.000 intron (NM_152336, intron 22 of 24) AluJr|SINE|Alu -277179 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA KN196472.1-1 KN196472.1 131842 132052 + 6.72 0.000 NA NA NA NA chr9-6218 chr9 109772479 109772689 + 6.72 0.000 intron (NM_001037293, intron 1 of 6) intron (NM_001037293, intron 1 of 6) -7614 NM_007203 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr6-3775 chr6 17492353 17492563 + 6.72 0.000 intron (NM_001363533, intron 4 of 9) intron (NM_001363533, intron 4 of 9) 18807 NR_110855 101928491 Hs.622876 NR_110855 LOC101928491 - uncharacterized LOC101928491 ncRNA chr13-4345 chr13 102870074 102870284 + 6.72 0.000 intron (NM_000123, intron 12 of 14) MER102b|DNA|hAT-Charlie -9920 NR_026965 121952 Hs.660773 NR_026965 ENSG00000250878 METTL21EP METTL21CP1 methyltransferase like 21E, pseudogene pseudo chr7-5168 chr7 6562080 6562290 + 6.72 0.000 Intergenic L1MC|LINE|L1 -10749 NM_001145118 392862 Hs.512174 NM_001145118 ENSG00000215045 GRID2IP DELPHILIN Grid2 interacting protein protein-coding chr1-15254 chr1 113268957 113269167 + 6.72 0.000 Intergenic (TTTCTC)n|Simple_repeat|Simple_repeat -62809 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr3-8312 chr3 62954544 62954754 + 6.72 0.000 Intergenic MER57B2|LTR|ERV1 -79233 NM_183393 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr12-6437 chr12 87379339 87379549 + 6.72 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 48705 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr6-6132 chr6 161290210 161290420 + 6.72 0.000 Intergenic Intergenic -16254 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr11-9012 chr11 25094634 25094844 + 6.72 0.000 Intergenic Intergenic 597686 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr22-1975 chr22 16914741 16914951 + 6.72 0.000 Intergenic Intergenic 87372 NR_003607 27437 Hs.143955 NR_003607 ENSG00000229027 HSFY1P1 CECR8|HSFYL1|HSFYP1|NCRNA00016 HSFY1 pseudogene 1 pseudo chr10-4332 chr10 27815450 27815660 + 6.72 0.000 intron (NM_018076, intron 19 of 19) L2|LINE|L2 -69736 NM_001242702 283078 Hs.128193 NM_173576 ENSG00000150051 MKX C10orf48|IFRX|IRXL1 mohawk homeobox protein-coding chr20-2780 chr20 53866167 53866377 + 6.72 0.000 Intergenic Intergenic 9437 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr9-5385 chr9 92439987 92440197 + 6.72 0.000 intron (NM_001286969, intron 4 of 6) MER44C|DNA|TcMar-Tigger -15538 NM_005014 4958 Hs.94070 NM_005014 ENSG00000127083 OMD OSAD|SLRR2C osteomodulin protein-coding chr4-5368 chr4 186726933 186727143 + 6.72 0.000 Intergenic CpG-21708 -3182 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr3-10516 chr3 137808207 137808417 + 6.72 0.000 Intergenic Intergenic 36401 NR_109987 100507274 Hs.360349 NR_109987 ENSG00000239513 LINC01210 - long intergenic non-protein coding RNA 1210 ncRNA chr17-7357 chr17 6836266 6836476 + 6.72 0.000 Intergenic Intergenic -4642 NM_053285 83659 Hs.462108 NM_053285 ENSG00000167858 TEKT1 - tektin 1 protein-coding chr2-7021 chr2 150297040 150297250 + 6.72 0.000 Intergenic Intergenic -40138 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr4-6332 chr4 92303749 92303959 + 6.72 0.000 promoter-TSS (NM_001510) promoter-TSS (NM_001510) -112 NM_001510 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr19-6488 chr19 17724410 17724620 + 6.72 0.000 intron (NM_018174, intron 3 of 6) intron (NM_018174, intron 3 of 6) 4359 NM_001308363 55201 Hs.66048 NM_018174 ENSG00000130479 MAP1S BPY2IP1|C19orf5|MAP8|VCY2IP-1|VCY2IP1 microtubule associated protein 1S protein-coding chr9-7380 chr9 18105130 18105340 + 6.72 0.000 Intergenic MIR3|SINE|MIR -368918 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr7-5688 chr7 66916643 66916853 + 6.72 0.000 Intergenic AluJb|SINE|Alu -4477 NM_017994 55069 Hs.488478 NM_017994 ENSG00000106609 TMEM248 C7orf42 transmembrane protein 248 protein-coding chr7-7362 chr7 56097724 56097934 + 6.72 0.000 Intergenic Intergenic -4833 NR_047689 5260 Hs.730821 NM_006213 ENSG00000164776 PHKG1 PHKG phosphorylase kinase catalytic subunit gamma 1 protein-coding chr4-5770 chr4 71070121 71070331 + 6.72 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 76577 NM_000788 1633 Hs.709 NM_000788 ENSG00000156136 DCK - deoxycytidine kinase protein-coding chr12-6196 chr12 21676105 21676315 + 6.72 0.000 Intergenic Intergenic -18355 NM_002300 3945 Hs.446149 NM_002300 ENSG00000111716 LDHB HEL-S-281|LDH-B|LDH-H|LDHBD|TRG-5 lactate dehydrogenase B protein-coding chr14-5332 chr14 102511715 102511925 + 6.72 0.000 Intergenic (CTGCC)n|Simple_repeat|Simple_repeat -2044 NM_001348652 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr11-8551 chr11 132550568 132550778 + 6.72 0.000 intron (NM_002545, intron 2 of 6) intron (NM_002545, intron 2 of 6) 266371 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr11-10545 chr11 120567782 120567992 + 6.72 0.000 intron (NM_001282470, intron 1 of 19) Plat_L3|LINE|CR1 3451 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr3-5997 chr3 48420235 48420445 + 6.72 0.000 intron (NM_002673, intron 10 of 37) intron (NM_002673, intron 10 of 37) 9123 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chr2-5958 chr2 42461189 42461399 + 6.72 0.000 intron (NM_172344, intron 1 of 1) intron (NM_172344, intron 1 of 1) 32688 NM_133329 170850 Hs.352633 NM_133329 ENSG00000171126 KCNG3 KV10.1|KV6.3 potassium voltage-gated channel modifier subfamily G member 3 protein-coding chr11-9762 chr11 69282120 69282330 + 6.72 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -11930 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr7-9079 chr7 105109347 105109557 + 6.72 0.000 intron (NM_182931, intron 23 of 26) intron (NM_182931, intron 23 of 26) 95247 NM_182931 55904 Hs.592262 NM_018682 ENSG00000005483 KMT2E HDCMC04P|MLL5|NKp44L lysine methyltransferase 2E protein-coding chr12-6646 chr12 615708 615918 + 6.72 0.000 intron (NM_016533, intron 1 of 3) L2c|LINE|L2 -5397 NM_001294345 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chr4-5459 chr4 41203136 41203346 + 6.72 0.000 intron (NM_173075, intron 1 of 16) intron (NM_173075, intron 1 of 16) 11301 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr17-2727 chr17 74362526 74362736 + 6.72 0.000 promoter-TSS (NM_001080466) promoter-TSS (NM_001080466) -763 NM_001080466 388419 NM_001080466 ENSG00000204347 BTBD17 BTBD17A|LGALS3BPL|TANGO10A BTB domain containing 17 protein-coding chr10-7703 chr10 30012355 30012565 + 6.72 0.000 TTS (NM_001350001) TTS (NM_001350001) 47126 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr10-5737 chr10 101855930 101856140 + 6.72 0.000 intron (NM_024541, intron 24 of 25) intron (NM_024541, intron 24 of 25) -12115 NM_173192 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr11-7993 chr11 11688194 11688404 + 6.72 0.000 Intergenic THE1A|LTR|ERVL-MaLR -31577 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr22-4015 chr22 40101444 40101654 + 6.72 0.000 intron (NM_001024843, intron 1 of 23) intron (NM_001024843, intron 1 of 23) 56732 NM_001024843 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr3-8376 chr3 89636840 89637050 + 6.72 0.000 Intergenic Intergenic 529324 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr4-8500 chr4 160131448 160131658 + 6.72 0.000 Intergenic Intergenic -353769 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr7-9736 chr7 157403842 157404052 + 6.72 0.000 intron (NM_058246, intron 8 of 9) intron (NM_058246, intron 8 of 9) -62284 NR_110157 101927914 Hs.623826 NR_110157 ENSG00000234210 LOC101927914 - uncharacterized LOC101927914 ncRNA chr8-4823 chr8 19357490 19357700 + 6.72 0.000 intron (NR_156444, intron 5 of 8) intron (NR_156444, intron 5 of 8) 43619 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr3-3928 chr3 49346979 49347189 + 6.72 0.000 Intergenic Intergenic -7031 NM_001251877 7375 Hs.77500 NM_003363 ENSG00000114316 USP4 UNP|Unph ubiquitin specific peptidase 4 protein-coding chr14-4954 chr14 74501120 74501330 + 6.72 0.000 intron (NM_000428, intron 35 of 35) intron (NM_000428, intron 35 of 35) 7460 NM_194279 122961 Hs.291079 NM_194279 ENSG00000165898 ISCA2 HBLD1|ISA2|MMDS4|c14_5557 iron-sulfur cluster assembly 2 protein-coding chr8-6141 chr8 30227596 30227806 + 6.72 0.000 Intergenic Intergenic 71332 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr2-12849 chr2 96430458 96430668 + 6.72 0.000 Intergenic MER52A|LTR|ERV1 74794 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr8-1622 chr8 53712479 53712689 + 6.72 0.000 Intergenic Intergenic 130458 NM_213620 51606 Hs.491737 NM_015941 ENSG00000047249 ATP6V1H CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase H+ transporting V1 subunit H protein-coding chr16-3358 chr16 48203675 48203885 + 6.72 0.000 intron (NM_001370497, intron 13 of 29) AluSx|SINE|Alu 28491 NM_033151 85320 Hs.652267 NM_032583 ENSG00000121270 ABCC11 EWWD|MRP8|WW ATP binding cassette subfamily C member 11 protein-coding chr20-2673 chr20 45374865 45375075 + 6.72 0.000 3' UTR (NM_001099791, exon 4 of 4) 3' UTR (NM_001099791, exon 4 of 4) 3355 NM_014477 27296 Hs.710271 NM_014477 ENSG00000124251 TP53TG5 C20orf10|CLG01 TP53 target 5 protein-coding chr2-10605 chr2 4198510 4198720 + 6.72 0.000 Intergenic Intergenic 224454 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr7-9104 chr7 106462573 106462783 + 6.72 0.000 Intergenic Intergenic -177695 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chrX-1789 chrX 79680216 79680426 + 6.72 0.000 Intergenic L1PA11|LINE|L1 -312769 NM_001171581 9452 Hs.17109 NM_004867 ENSG00000078596 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding chr22-3039 chr22 31389885 31390095 + 6.72 0.000 Intergenic L1M5|LINE|L1 -9614 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chr11-8362 chr11 82542684 82542894 + 6.72 0.000 Intergenic Kanga11a|DNA|TcMar-Tc2 -138876 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr1-9026 chr1 11765687 11765897 + 6.72 0.000 intron (NM_001010881, intron 2 of 20) intron (NM_001010881, intron 2 of 20) 3599 NM_001010881 284498 Hs.585415 NM_001010881 C1orf167 - chromosome 1 open reading frame 167 protein-coding chr3-6942 chr3 160163147 160163357 + 6.72 0.000 intron (NR_108088, intron 3 of 9) intron (NR_108088, intron 3 of 9) 43840 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr1-9650 chr1 47512384 47512594 + 6.72 0.000 Intergenic Intergenic -75172 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr13-2105 chr13 85165732 85165942 + 6.72 0.000 Intergenic L1MA9|LINE|L1 -17780 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chrX-1582 chrX 75156323 75156533 + 6.72 0.000 promoter-TSS (NM_001271697) promoter-TSS (NM_001271697) 59 NM_001363821 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chr19-4528 chr19 8380488 8380698 + 6.72 0.000 intron (NR_038237, intron 1 of 2) HERV9NC-int|LTR|ERV1 8787 NR_049795 100847049 NR_049795 ENSG00000265390 MIR4999 mir-4999 microRNA 4999 ncRNA chr2-11153 chr2 144505312 144505522 + 6.72 0.000 intron (NM_001171653, intron 2 of 8) intron (NM_001171653, intron 2 of 8) -14197 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chr19-3266 chr19 2559690 2559900 + 6.72 0.000 intron (NM_052847, intron 2 of 4) AluSp|SINE|Alu -70920 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr13-4377 chr13 108283185 108283395 + 6.72 0.000 intron (NM_001145645, intron 2 of 4) intron (NM_001145645, intron 2 of 4) 13661 NM_001145645 10673 Hs.525157 NM_006573 ENSG00000102524 TNFSF13B BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4 TNF superfamily member 13b protein-coding chr1-15234 chr1 112001010 112001220 + 6.72 0.000 Intergenic Intergenic 10579 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr7-6656 chr7 132705334 132705544 + 6.72 0.000 intron (NR_046323, intron 3 of 4) intron (NR_046323, intron 3 of 4) -53531 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr2-14096 chr2 200191840 200192050 + 6.72 0.000 Intergenic Intergenic -113934 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr2-11587 chr2 1907487 1907697 + 6.72 0.000 intron (NM_015025, intron 13 of 24) intron (NM_015025, intron 13 of 24) -163077 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr15-1887 chr15 71792609 71792819 + 6.72 0.000 Intergenic Intergenic -17840 NM_016346 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding chr17-7471 chr17 15156555 15156765 + 6.72 0.000 Intergenic Intergenic -50473 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr2-5555 chr2 166149153 166149363 + 6.72 0.000 promoter-TSS (NM_001202435) promoter-TSS (NM_001202435) -97 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr16-5367 chr16 86051297 86051507 + 6.72 0.000 Intergenic Intergenic 133055 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr16-6533 chr16 63490784 63490994 + 6.72 0.000 Intergenic MLT1E3-int|LTR|ERVL-MaLR -1454451 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr11-7239 chr11 7637016 7637226 + 6.72 0.000 intron (NM_001351860, intron 12 of 21) L3|LINE|CR1 31387 NM_001256569 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr3-7690 chr3 46213688 46213898 + 6.72 0.000 Intergenic L2|LINE|L2 -5480 NM_001295 1230 Hs.301921 NM_001295 ENSG00000163823 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 C-C motif chemokine receptor 1 protein-coding chr10-6826 chr10 19250478 19250688 + 6.72 0.000 intron (NM_001142308, intron 18 of 39) intron (NM_001142308, intron 18 of 39) 201782 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr7-4176 chr7 117569092 117569302 + 6.72 0.000 intron (NM_000492, intron 11 of 26) L2b|LINE|L2 -4521 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr8-6565 chr8 69694599 69694809 + 6.72 0.000 intron (NM_001146009, intron 4 of 7) intron (NM_001146009, intron 4 of 7) 101804 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr11-10141 chr11 89560016 89560226 + 6.72 0.000 intron (NM_001143837, intron 1 of 20) MLT1C|LTR|ERVL-MaLR 29436 NM_001143837 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr19-7104 chr19 57693847 57694057 + 6.72 0.000 Intergenic Intergenic 11975 NR_073102 90233 Hs.109540 NM_138347 ENSG00000204519 ZNF551 - zinc finger protein 551 protein-coding chr5-4783 chr5 56044253 56044463 + 6.72 0.000 Intergenic L2a|LINE|L2 49191 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA chrX-3932 chrX 9808246 9808456 + 6.72 0.000 intron (NM_001649, intron 1 of 9) AluJo|SINE|Alu 21922 NM_001649 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr4-8775 chr4 188643710 188643920 + 6.72 0.000 Intergenic LTR48B|LTR|ERV1 -132842 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr13-2934 chr13 24771471 24771681 + 6.72 0.000 intron (NM_031277, intron 2 of 35) intron (NM_031277, intron 2 of 35) 7407 NM_001184993 56163 Hs.97464 NM_031277 ENSG00000132972 RNF17 Mmip-2|SPATA23|TDRD4 ring finger protein 17 protein-coding chr11-8405 chr11 96826446 96826656 + 6.72 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 318126 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr12-5873 chr12 51876873 51877083 + 6.72 0.000 Intergenic AluJb|SINE|Alu -11125 NM_001304459 341405 Hs.433492 NM_182608 ENSG00000167612 ANKRD33 C12orf7|PANKY ankyrin repeat domain 33 protein-coding chr7-8084 chr7 25179608 25179818 + 6.72 0.000 5' UTR (NM_001371351, exon 2 of 11) 5' UTR (NM_001371351, exon 2 of 11) 641 NM_138811 136895 Hs.122055 NM_138811 ENSG00000153790 C7orf31 - chromosome 7 open reading frame 31 protein-coding chr4-6090 chr4 9998445 9998655 + 6.72 0.000 intron (NM_001001290, intron 3 of 12) L1ME3B|LINE|L1 22947 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr2-12200 chr2 41965965 41966175 + 6.72 0.000 Intergenic Intergenic -12264 NR_161189 400950 Hs.738713 NM_001242815 ENSG00000205086 C2orf91 - chromosome 2 open reading frame 91 ncRNA chr16-6392 chr16 53689279 53689489 + 6.72 0.000 intron (NM_001127897, intron 4 of 24) L1MA4A|LINE|L1 14475 NM_001328422 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding chr17-8039 chr17 50390854 50391064 + 6.72 0.000 intron (NM_018509, intron 4 of 6) intron (NM_018509, intron 4 of 6) 6564 NM_018509 55379 Hs.370927 NM_018509 ENSG00000108829 LRRC59 PRO1855|p34 leucine rich repeat containing 59 protein-coding chr20-3420 chr20 44355655 44355865 + 6.72 0.000 promoter-TSS (NM_001287184) promoter-TSS (NM_001287184) -41 NM_001287183 3172 Hs.116462 NM_000457 ENSG00000101076 HNF4A FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14 hepatocyte nuclear factor 4 alpha protein-coding chr5-6665 chr5 56717042 56717252 + 6.72 0.000 Intergenic Intergenic 55724 NM_001365184 105378979 NM_001365184 LOC105378979 - growth/differentiation factor 3 protein-coding chr17-6218 chr17 9842343 9842553 + 6.72 0.000 intron (NM_004246, intron 3 of 12) intron (NM_004246, intron 3 of 12) 16524 NM_004246 9340 Hs.248202 NM_004246 ENSG00000065325 GLP2R - glucagon like peptide 2 receptor protein-coding chr2-12572 chr2 69659820 69660030 + 6.72 0.000 intron (NM_001320698, intron 2 of 14) L1MEd|LINE|L1 16117 NM_001320698 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr17-6833 chr17 15298244 15298454 + 6.72 0.000 Intergenic Intergenic -33023 NR_104017 5376 Hs.372031 NM_000304 ENSG00000109099 PMP22 CIDP|CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110 peripheral myelin protein 22 protein-coding chr10-3132 chr10 52314881 52315091 + 6.72 0.000 promoter-TSS (NR_038277) promoter-TSS (NR_038277) 705 NM_012242 22943 Hs.40499 NM_012242 ENSG00000107984 DKK1 DKK-1|SK dickkopf WNT signaling pathway inhibitor 1 protein-coding chr12-6672 chr12 3016802 3017012 + 6.72 0.000 intron (NM_201441, intron 5 of 11) intron (NM_201441, intron 5 of 11) 56972 NM_201443 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr17-5916 chr17 74703290 74703500 + 6.72 0.000 intron (NM_001289086, intron 3 of 6) intron (NM_001289086, intron 3 of 6) 9528 NM_001289083 146722 Hs.567706 NM_139018 ENSG00000186074 CD300LF CD300f|CLM-1|CLM1|IREM-1|IREM1|IgSF13|LMIR3|NKIR CD300 molecule like family member f protein-coding chr3-3953 chr3 50658504 50658714 + 6.72 0.000 Intergenic Intergenic -16318 NM_004947 1795 Hs.476284 NM_004947 ENSG00000088538 DOCK3 MOCA|NEDIDHA|PBP dedicator of cytokinesis 3 protein-coding chr19-6619 chr19 30132035 30132245 + 6.72 0.000 Intergenic Intergenic 189901 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr5-2650 chr5 8570337 8570547 + 6.72 0.000 Intergenic AluSx1|SINE|Alu 109517 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr11-5670 chr11 128927586 128927796 + 6.72 0.000 Intergenic Intergenic 10143 NM_001195194 63970 Hs.160953 NM_022112 ENSG00000120471 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding chr10-6544 chr10 71350060 71350270 + 6.72 0.000 intron (NM_018344, intron 3 of 5) MIR3|SINE|MIR 30906 NM_018344 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr1-7469 chr1 84875486 84875696 + 6.72 0.000 intron (NM_012152, intron 1 of 2) MSTD|LTR|ERVL-MaLR 17615 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding chr18-3379 chr18 59267785 59267995 + 6.72 0.000 3' UTR (NM_013435, exon 3 of 3) 3' UTR (NM_013435, exon 3 of 3) 5564 NM_013435 30062 Hs.278957 NM_013435 ENSG00000134438 RAX MCOP3|RX retina and anterior neural fold homeobox protein-coding chr1-7714 chr1 26357357 26357567 + 6.72 0.000 Intergenic Intergenic -3332 NM_001039775 55057 Hs.128738 NM_017977 ENSG00000176092 CRYBG2 AIM1L crystallin beta-gamma domain containing 2 protein-coding chr18-1827 chr18 21904896 21905106 + 6.72 0.000 Intergenic Intergenic -73595 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA chr4-6853 chr4 9807422 9807632 + 6.72 0.000 Intergenic L2c|LINE|L2 25893 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr7-7597 chr7 129812297 129812507 + 6.72 0.000 Intergenic AluSz|SINE|Alu -37388 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr10-4193 chr10 102036266 102036476 + 6.72 0.000 intron (NM_024541, intron 2 of 25) SVA_F|Retroposon|SVA 19802 NM_024541 79591 Hs.16004 NM_024541 ENSG00000120029 ARMH3 C10orf76 armadillo like helical domain containing 3 protein-coding chrX-1171 chrX 49200048 49200258 + 6.72 0.000 promoter-TSS (NM_003179) promoter-TSS (NM_003179) 49 NM_003179 6855 Hs.632804 NM_003179 ENSG00000102003 SYP MRX96|MRXSYP synaptophysin protein-coding chr3-10318 chr3 126828152 126828362 + 6.72 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 124017 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr1-10513 chr1 167059294 167059504 + 6.72 0.000 intron (NM_005814, intron 4 of 6) intron (NM_005814, intron 4 of 6) 30978 NM_005814 10223 Hs.651244 NM_005814 ENSG00000143167 GPA33 A33 glycoprotein A33 protein-coding chr19-4107 chr19 16975336 16975546 + 6.72 0.000 intron (NM_015692, intron 16 of 41) AluJo|SINE|Alu 51369 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr17-4899 chr17 73044022 73044232 + 6.72 0.000 intron (NM_001352692, intron 3 of 9) L1ME2|LINE|L1 48561 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr1-7062 chr1 182604323 182604533 + 6.72 0.000 promoter-TSS (NM_002928) promoter-TSS (NM_002928) -39 NM_002928 6004 Hs.413297 NM_002928 ENSG00000143333 RGS16 A28-RGS14|A28-RGS14P|RGS-R regulator of G protein signaling 16 protein-coding chrX-3006 chrX 51334536 51334746 + 6.72 0.000 intron (NM_153183, intron 2 of 2) intron (NM_153183, intron 2 of 2) 1819 NM_001304963 170685 Hs.375178 NM_153183 ENSG00000122824 NUDT10 APS2|DIPP3-alpha|DIPP3a nudix hydrolase 10 protein-coding chr1-13864 chr1 20932239 20932449 + 6.72 0.000 intron (NM_003760, intron 9 of 31) Tigger1|DNA|TcMar-Tigger 56088 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr17-8541 chr17 79529592 79529802 + 6.72 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) -13549 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr5-5734 chr5 169631729 169631939 + 6.72 0.000 Intergenic Intergenic -5441 NR_156756 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr4-7104 chr4 33999650 33999860 + 6.72 0.000 intron (NR_125902, intron 1 of 4) AluY|SINE|Alu 40138 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr2-11177 chr2 151203684 151203894 + 6.72 0.000 Intergenic Intergenic 58074 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr3-9762 chr3 69849671 69849881 + 6.72 0.000 intron (NM_001354608, intron 2 of 10) intron (NM_001354608, intron 2 of 10) -16448 NM_198177 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr17-8574 chr17 80162929 80163139 + 6.72 0.000 Intergenic LTR49-int|LTR|ERV1 -6996 NR_047566 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr4-6455 chr4 141047244 141047454 + 6.72 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 86120 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr3-11115 chr3 186235325 186235535 + 6.72 0.000 intron (NM_001346, intron 20 of 24) intron (NM_001346, intron 20 of 24) -126341 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr6-4136 chr6 166191486 166191696 + 6.72 0.000 Intergenic AluSz|SINE|Alu -22922 NM_001270484 6862 Hs.389457 NM_003181 ENSG00000164458 TBXT SAVA|T|TFT T-box transcription factor T protein-coding chr1-13205 chr1 208909131 208909341 + 6.72 0.000 Intergenic Intergenic -63218 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr7-6922 chr7 78345392 78345602 + 6.72 0.000 intron (NM_001301128, intron 8 of 20) intron (NM_001301128, intron 8 of 20) -1745 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr2-9730 chr2 66481184 66481394 + 6.72 0.000 intron (NM_002398, intron 7 of 12) intron (NM_002398, intron 7 of 12) -40959 NR_046625 100873998 Hs.734698 NR_046625 ENSG00000230749 MEIS1-AS2 MEIS1-AS1 MEIS1 antisense RNA 2 ncRNA chr10-3804 chr10 132555109 132555319 + 6.72 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 17427 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr11-6358 chr11 64070490 64070700 + 6.72 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -33295 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr1-11595 chr1 211195543 211195753 + 6.72 0.000 Intergenic MER1B|DNA|hAT-Charlie -61500 NM_172362 3756 Hs.553187 NM_002238 ENSG00000143473 KCNH1 EAG|EAG1|Kv10.1|TMBTS|ZLS1|h-eag|hEAG1 potassium voltage-gated channel subfamily H member 1 protein-coding chr10-6257 chr10 75097654 75097864 + 6.72 0.000 exon (NM_001320843, exon 3 of 5) exon (NM_001320843, exon 3 of 5) 1727 NM_001363514 51207 Hs.178170 NM_016364 ENSG00000079393 DUSP13 BEDP|DUSP13A|DUSP13B|MDSP|SKRP4|TMDP dual specificity phosphatase 13 protein-coding chr7-6575 chr7 74925031 74925241 + 6.72 0.000 Intergenic L1MB1|LINE|L1 34368 NR_027776 5383 Hs.292996 NM_174930 PMS2P5 PMS2L5|PMS7 PMS1 homolog 2, mismatch repair system component pseudogene 5 pseudo chr4-6304 chr4 85333497 85333707 + 6.72 0.000 Intergenic Intergenic -141548 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr8-6771 chr8 92588016 92588226 + 6.72 0.000 intron (NR_125827, intron 3 of 4) intron (NR_125827, intron 3 of 4) 67373 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr9-3306 chr9 83956564 83956774 + 6.72 0.000 promoter-TSS (NM_032307) promoter-TSS (NM_032307) 73 NM_032307 84267 Hs.208914 NM_032307 ENSG00000165118 C9orf64 - chromosome 9 open reading frame 64 protein-coding KI270438.1-8 KI270438.1 46614 46824 + 6.72 0.000 NA NA NA NA chr11-6463 chr11 67098959 67099169 + 6.72 0.000 Intergenic Intergenic 19284 NR_160735 107984341 NR_160735 LOC107984341 - uncharacterized LOC107984341 ncRNA chr5-6758 chr5 81205028 81205238 + 6.72 0.000 intron (NM_006909, intron 19 of 26) intron (NM_006909, intron 19 of 26) -28187 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr14-5060 chr14 83089216 83089426 + 6.72 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 446689 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr17-3829 chr17 42665432 42665642 + 6.72 0.000 exon (NM_016437, exon 7 of 11) exon (NM_016437, exon 7 of 11) 6253 NM_016437 27175 Hs.279669 NM_016437 ENSG00000037042 TUBG2 - tubulin gamma 2 protein-coding chr2-7201 chr2 216578407 216578617 + 6.72 0.000 Intergenic Intergenic 28426 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr21-1348 chr21 33175255 33175465 + 6.72 0.000 Intergenic L1MA9|LINE|L1 -5124 NR_024102 728409 Hs.125234 NR_024102 ENSG00000229086 LINC01548 C21orf54 long intergenic non-protein coding RNA 1548 ncRNA chr1-12817 chr1 86533424 86533634 + 6.72 0.000 Intergenic L1MC1|LINE|L1 -13549 NM_012128 22802 Hs.567422 NM_012128 ENSG00000016602 CLCA4 CaCC|CaCC2 chloride channel accessory 4 protein-coding chr1-6344 chr1 6235744 6235954 + 6.72 0.000 promoter-TSS (NR_103534) promoter-TSS (NR_103534) 115 NM_012405 23463 Hs.515688 NM_012405 ENSG00000116237 ICMT HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT isoprenylcysteine carboxyl methyltransferase protein-coding chr8-2585 chr8 47925022 47925232 + 6.72 0.000 intron (NM_001081640, intron 21 of 84) intron (NM_001081640, intron 21 of 84) 35009 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr4-2523 chr4 40213192 40213402 + 6.72 0.000 intron (NM_001278361, intron 2 of 3) intron (NM_001278361, intron 2 of 3) 16266 NM_004310 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chr2-12107 chr2 34357305 34357515 + 6.72 0.000 Intergenic Intergenic 290184 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr16-6676 chr16 69806019 69806229 + 6.72 0.000 intron (NM_001270455, intron 4 of 8) AluJr|SINE|Alu -32613 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr8-3144 chr8 71281893 71282103 + 6.72 0.000 intron (NM_001370336, intron 10 of 17) intron (NM_001370336, intron 10 of 17) 74708 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr12-4385 chr12 5521291 5521501 + 6.72 0.000 Intergenic Intergenic 27264 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr14-4732 chr14 60567688 60567898 + 6.72 0.000 Intergenic MER58B|DNA|hAT-Charlie 58647 NM_007374 4990 Hs.194756 NM_007374 ENSG00000184302 SIX6 MCOPCT2|ODRMD|OPTX2|Six9 SIX homeobox 6 protein-coding chrX-1310 chrX 125244161 125244371 + 6.72 0.000 Intergenic Intergenic -75605 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr11-7418 chr11 101669671 101669881 + 6.72 0.000 Intergenic L2a|LINE|L2 -85769 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr1-16579 chr1 235901458 235901668 + 6.72 0.000 Intergenic LTR16A1|LTR|ERVL -17850 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr12-7509 chr12 68530851 68531061 + 6.72 0.000 Intergenic Intergenic -79472 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr15-3639 chr15 80204770 80204980 + 6.72 0.000 intron (NM_001352888, intron 1 of 2) intron (NM_001352888, intron 1 of 2) 47338 NM_001352888 100996492 Hs.20034 NM_001352888 ENSG00000259417 CTXND1 LINC01314 cortexin domain containing 1 protein-coding chr6-6948 chr6 16582525 16582735 + 6.72 0.000 intron (NM_000332, intron 5 of 8) intron (NM_000332, intron 5 of 8) 177554 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr11-10510 chr11 119189668 119189878 + 6.72 0.000 TTS (NR_145809) TTS (NR_145809) 868 NR_145809 109623467 NR_145809 SNORD150 - small nucleolar RNA, C/D box 150 snoRNA chr10-7632 chr10 23495427 23495637 + 6.72 0.000 Intergenic Intergenic 56263 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chrX-2987 chrX 38752338 38752548 + 6.72 0.000 Intergenic Intergenic -48989 NM_021242 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr1-4879 chr1 33462187 33462397 + 6.72 0.000 Intergenic AluY|SINE|Alu -10353 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr1-10526 chr1 169326922 169327132 + 6.72 0.000 intron (NR_104229, intron 1 of 12) MIR3|SINE|MIR 40770 NM_013330 29922 Hs.706952 NM_013330 ENSG00000143156 NME7 CFAP67|MN23H7|NDK 7|NDK7|nm23-H7 NME/NM23 family member 7 protein-coding chr2-10007 chr2 23980180 23980390 + 6.72 0.000 intron (NM_181713, intron 4 of 6) L1MB7|LINE|L1 -29800 NM_001346880 388931 Hs.407482 NM_001080473 ENSG00000205639 MFSD2B - major facilitator superfamily domain containing 2B protein-coding chr14-4208 chr14 94698100 94698310 + 6.72 0.000 Intergenic L2a|LINE|L2 57480 NR_015340 388007 Hs.527795 NR_015340 ENSG00000187483 SERPINA13P SERPINA13|UNQ6121 serpin family A member 13, pseudogene pseudo chr17-8330 chr17 73010499 73010709 + 6.72 0.000 intron (NM_001352692, intron 4 of 9) MER5B|DNA|hAT-Charlie 82084 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr2-7557 chr2 24111246 24111456 + 6.72 0.000 intron (NR_111929, intron 3 of 5) AluJo|SINE|Alu 11983 NM_199346 375189 Hs.442718 NM_199346 ENSG00000176732 PFN4 - profilin family member 4 protein-coding chr7-7225 chr7 22427944 22428154 + 6.72 0.000 intron (NM_207342, intron 4 of 4) LTR16|LTR|ERVL -70895 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr4-4753 chr4 96223335 96223545 + 6.72 0.000 Intergenic L2a|LINE|L2 -87263 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr19-3184 chr19 45972690 45972900 + 6.72 0.000 intron (NM_002516, intron 1 of 3) intron (NM_002516, intron 1 of 3) 1070 NM_002516 4858 Hs.375439 NM_002516 ENSG00000104967 NOVA2 ANOVA|NOVA3 NOVA alternative splicing regulator 2 protein-coding chr1-10956 chr1 212782958 212783168 + 6.72 0.000 intron (NM_015471, intron 3 of 5) AluJo|SINE|Alu 8714 NM_015471 25936 Hs.497692 NM_015471 ENSG00000117697 NSL1 C1orf48|DC8|MIS14 NSL1 component of MIS12 kinetochore complex protein-coding chr17-7272 chr17 3317438 3317648 + 6.72 0.000 Intergenic MIRc|SINE|MIR 7298 NR_024128 390756 Hs.632245 NM_001005334 ENSG00000180068 OR3A4P OLFRA05|OLFRA06|OR17-13|OR17-16|OR17-24|OR17-25|OR24|OR25|OR3A4|OR3A5P olfactory receptor family 3 subfamily A member 4 pseudogene pseudo chr4-3548 chr4 176436651 176436861 + 6.72 0.000 Intergenic Intergenic 116790 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr15-3830 chr15 77700943 77701153 + 6.72 0.000 intron (NM_001301192, intron 2 of 4) MIRb|SINE|MIR -4553 NM_001301199 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr16-7073 chr16 88880785 88880995 + 6.72 0.000 intron (NM_175931, intron 8 of 10) intron (NM_175931, intron 8 of 10) -2625 NR_135194 101927793 Hs.690953 NR_135194 ENSG00000259881 LOC101927793 - uncharacterized LOC101927793 ncRNA chr1-12945 chr1 151227926 151228136 + 6.72 0.000 intron (NM_001135637, intron 3 of 13) intron (NM_001135637, intron 3 of 13) -26703 NM_001330692 5710 Hs.505059 NM_002810 ENSG00000159352 PSMD4 AF|AF-1|ASF|MCB1|Rpn10|S5A|pUB-R5 proteasome 26S subunit, non-ATPase 4 protein-coding chr12-4313 chr12 128756679 128756889 + 6.72 0.000 Intergenic AluSx1|SINE|Alu 67174 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr5-5989 chr5 131242814 131243024 + 6.72 0.000 Intergenic Intergenic -21090 NM_001038702 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding chr12-2211 chr12 45290212 45290422 + 6.72 0.000 intron (NM_001204803, intron 2 of 20) intron (NM_001204803, intron 2 of 20) -2373 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr16-3404 chr16 82432865 82433075 + 6.72 0.000 Intergenic (TAATAC)n|Simple_repeat|Simple_repeat -193999 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chrX-4006 chrX 16302837 16303047 + 6.72 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 135461 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - MAGE family member B17 protein-coding chr1-13094 chr1 182631129 182631339 + 6.72 0.000 Intergenic Intergenic 16094 NR_036490 284648 Hs.253475 NR_036490 ENSG00000261504 LINC01686 - long intergenic non-protein coding RNA 1686 ncRNA chr11-6960 chr11 113817187 113817397 + 6.72 0.000 intron (NM_001346268, intron 9 of 20) intron (NM_001346268, intron 9 of 20) 37496 NM_001101389 644672 Hs.705360 NM_001101389 ENSG00000228607 CLDN25 - claudin 25 protein-coding chr3-8064 chr3 8765503 8765713 + 6.72 0.000 intron (NM_001354656, intron 3 of 3) intron (NM_001354656, intron 3 of 3) 3123 NM_001354656 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr7-8141 chr7 28305541 28305751 + 6.72 0.000 intron (NM_182899, intron 1 of 9) intron (NM_182899, intron 1 of 9) 6325 NM_182899 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr22-3751 chr22 27018698 27018908 + 6.72 0.000 Intergenic (CCAT)n|Simple_repeat|Simple_repeat 41715 NM_001318329 284898 Hs.350813 NM_001318329 LOC284898 - uncharacterized LOC284898 protein-coding chr19-3112 chr19 11659705 11659915 + 6.72 0.000 Intergenic Intergenic 7279 NR_002944 664709 Hs.534822 NR_002944 HNRNPA1P10 HNRPA1L-2 heterogeneous nuclear ribonucleoprotein A1 pseudogene 10 pseudo chr9-8070 chr9 98073953 98074163 + 6.72 0.000 intron (NM_018946, intron 2 of 5) AluJb|SINE|Alu 17326 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr14-3654 chr14 80549142 80549352 + 6.72 0.000 intron (NM_152446, intron 21 of 24) intron (NM_152446, intron 21 of 24) -318190 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chrX-3290 chrX 104698879 104699089 + 6.72 0.000 intron (NM_017416, intron 2 of 10) (TC)n|Simple_repeat|Simple_repeat 132785 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr4-5944 chr4 155329962 155330172 + 6.72 0.000 Intergenic Intergenic -24149 NR_125937 102724776 Hs.61271 NR_125937 ENSG00000250910 LOC102724776 - uncharacterized LOC102724776 ncRNA chr2-13117 chr2 113999633 113999843 + 6.72 0.000 intron (NR_148508, intron 1 of 1) intron (NR_148508, intron 1 of 1) -19754 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr13-4443 chr13 111934710 111934920 + 6.72 0.000 Intergenic L1PB1|LINE|L1 -37495 NR_120392 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr3-9641 chr3 59980416 59980626 + 6.72 0.000 intron (NM_001320901, intron 5 of 6) intron (NM_001320901, intron 5 of 6) 100388 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr18-2233 chr18 69008566 69008776 + 6.72 0.000 intron (NM_001093729, intron 8 of 9) intron (NM_001093729, intron 8 of 9) 210591 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr3-10810 chr3 161430316 161430526 + 6.72 0.000 intron (NR_102265, intron 2 of 3) intron (NR_102265, intron 2 of 3) 3994 NR_102265 101243545 Hs.737526 NR_102265 ENSG00000240567 LINC02067 - long intergenic non-protein coding RNA 2067 ncRNA chr5-5890 chr5 19054575 19054785 + 6.72 0.000 Intergenic AluYf1|SINE|Alu 831592 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr7-6162 chr7 127749463 127749673 + 6.72 0.000 intron (NM_014390, intron 10 of 23) intron (NM_014390, intron 10 of 23) 97374 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr10-8149 chr10 70786601 70786811 + 6.72 0.000 Intergenic Intergenic -1287 NM_001318241 219793 Hs.386698 NM_152710 ENSG00000166220 TBATA C10orf27|SPATIAL thymus, brain and testes associated protein-coding chr7-7503 chr7 101471826 101472036 + 6.72 0.000 intron (NM_133457, intron 3 of 12) MER41C|LTR|ERV1 97075 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr4-6443 chr4 137080372 137080582 + 6.72 0.000 intron (NR_149105, intron 2 of 3) L1ME3Cz|LINE|L1 -113279 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr18-3153 chr18 41624584 41624794 + 6.72 0.000 Intergenic Intergenic -104012 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr14-2965 chr14 50347735 50347945 + 6.72 0.000 intron (NM_001282236, intron 3 of 8) L2|LINE|L2 35516 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr13-3902 chr13 53986114 53986324 + 6.72 0.000 Intergenic Intergenic 146652 NR_108063 100507428 Hs.351262 NR_108062 ENSG00000234787 LINC00458 LncRNA-ES3 long intergenic non-protein coding RNA 458 ncRNA chr8-5477 chr8 48269372 48269582 + 6.72 0.000 Intergenic Intergenic 261046 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr9-2186 chr9 133061258 133061468 + 6.72 0.000 promoter-TSS (NM_001807) promoter-TSS (NM_001807) -619 NM_001807 1056 Hs.533258 NM_001807 ENSG00000170835 CEL BAL|BSDL|BSSL|CELL|CEase|FAP|FAPP|LIPA|MODY8 carboxyl ester lipase protein-coding chr6-5459 chr6 158984954 158985164 + 6.72 0.000 intron (NR_144434, intron 3 of 8) intron (NR_144434, intron 3 of 8) 15128 NR_144434 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke head 3 protein-coding chr1-4506 chr1 28622337 28622547 + 6.72 0.000 intron (NM_005644, intron 1 of 5) intron (NM_005644, intron 1 of 5) 20625 NM_005644 6883 Hs.530251 NM_005644 ENSG00000120656 TAF12 TAF2J|TAFII20 TATA-box binding protein associated factor 12 protein-coding chr11-10011 chr11 80046429 80046639 + 6.72 0.000 Intergenic Intergenic -605504 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr6-4703 chr6 56672194 56672404 + 6.72 0.000 intron (NM_001144770, intron 6 of 94) intron (NM_001144770, intron 6 of 94) -29410 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chrX-5266 chrX 139235641 139235851 + 6.72 0.000 Intergenic Intergenic -30723 NM_001139500 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr13-4121 chr13 81340688 81340898 + 6.72 0.000 Intergenic LTR12C|LTR|ERV1 -113810 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr6-3441 chr6 139644845 139645055 + 6.72 0.000 Intergenic Intergenic -126123 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr5-6657 chr5 54760488 54760698 + 6.72 0.000 Intergenic Intergenic -16335 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr5-8239 chr5 110267745 110267955 + 6.72 0.000 Intergenic Intergenic 246065 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr5-7405 chr5 25700701 25700911 + 6.72 0.000 Intergenic L1MB8|LINE|L1 509853 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr6-4722 chr6 63010529 63010739 + 6.72 0.000 Intergenic HERVH-int|LTR|ERV1 309343 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr13-2045 chr13 49668567 49668777 + 6.72 0.000 intron (NR_103803, intron 1 of 2) intron (NR_103803, intron 1 of 2) 22814 NM_032565 84650 Hs.433278 NM_032565 ENSG00000123179 EBPL EBRP EBP like protein-coding chr19-5773 chr19 30218538 30218748 + 6.72 0.000 Intergenic Intergenic -153741 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr14-4701 chr14 58165885 58166095 + 6.72 0.000 Intergenic Intergenic -13777 NM_001320173 145407 Hs.26766 NM_001001872 ENSG00000139971 ARMH4 C14orf37|UT2|c14_5376 armadillo like helical domain containing 4 protein-coding chr6-5149 chr6 125214061 125214271 + 6.72 0.000 intron (NM_001318907, intron 1 of 4) LTR33|LTR|ERVL 10455 NM_001318907 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr3-7825 chr3 104878476 104878686 + 6.72 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -488132 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr10-6771 chr10 995545 995755 + 6.72 0.000 intron (NM_012341, intron 2 of 16) L2a|LINE|L2 7216 NM_012341 23560 Hs.215766 NM_012341 ENSG00000107937 GTPBP4 CRFG|NGB|NOG1 GTP binding protein 4 protein-coding chr5-6309 chr5 125222820 125223030 + 6.72 0.000 intron (NR_109882, intron 4 of 5) MamGyp-int|LTR|Gypsy 186094 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr10-5169 chr10 58137216 58137426 + 6.72 0.000 Intergenic MER57A1|LTR|ERV1 130573 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr4-5811 chr4 91640700 91640910 + 6.72 0.000 Intergenic Intergenic 636497 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr17-7476 chr17 15343859 15344069 + 6.72 0.000 Intergenic Intergenic -2367 NM_031898 64518 Hs.414648 NM_031898 ENSG00000125409 TEKT3 - tektin 3 protein-coding chr7-4223 chr7 156169784 156169994 + 6.72 0.000 Intergenic Intergenic 207257 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr11-6692 chr11 77445565 77445775 + 6.72 0.000 intron (NM_001128620, intron 1 of 15) intron (NM_001128620, intron 1 of 15) 28393 NM_002576 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr18-3050 chr18 28478206 28478416 + 6.72 0.000 Intergenic MER66-int|LTR|ERV1 -301181 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr12-6844 chr12 14870340 14870550 + 6.72 0.000 Intergenic Intergenic 15409 NM_000900 4256 Hs.365706 NM_000900 ENSG00000111341 MGP GIG36|MGLAP|NTI matrix Gla protein protein-coding chr13-1913 chr13 54530269 54530479 + 6.72 0.000 Intergenic Intergenic -218326 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr18-3180 chr18 44288099 44288309 + 6.72 0.000 Intergenic L3|LINE|CR1 243493 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr20-3286 chr20 8545194 8545404 + 6.72 0.000 intron (NM_182734, intron 3 of 32) L2c|LINE|L2 -285886 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr2-7520 chr2 20916913 20917123 + 6.72 0.000 Intergenic Intergenic -93888 NM_001282719 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr13-2851 chr13 109840541 109840751 + 6.72 0.000 Intergenic Intergenic -54063 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr17-6850 chr17 19760126 19760336 + 6.72 0.000 Intergenic Intergenic -11933 NM_000691 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chrX-4498 chrX 65156193 65156403 + 6.72 0.000 Intergenic AluJr|SINE|Alu -121557 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr16-6411 chr16 55465134 55465344 + 6.72 0.000 Intergenic Intergenic -2942 NR_147198 107984884 Hs.666473 NR_147198 MMP2-AS1 - MMP2 antisense RNA 1 ncRNA chr1-6007 chr1 53502899 53503109 + 6.72 0.000 Intergenic Intergenic 43605 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr15-2184 chr15 85852271 85852481 + 6.72 0.000 Intergenic Intergenic 26741 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chrX-4719 chrX 88367982 88368192 + 6.72 0.000 Intergenic THE1D|LTR|ERVL-MaLR -379138 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr5-6227 chr5 79990536 79990746 + 6.72 0.000 promoter-TSS (NM_001306212) promoter-TSS (NM_001306212) 621 NM_001167741 345778 Hs.531418 NM_001010891 ENSG00000177034 MTX3 - metaxin 3 protein-coding chr3-9116 chr3 30067680 30067890 + 6.72 0.000 Intergenic Intergenic -133629 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr15-5076 chr15 86234002 86234212 + 6.72 0.000 intron (NM_152336, intron 6 of 24) intron (NM_152336, intron 6 of 24) 82861 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chrX-5130 chrX 129792440 129792650 + 6.72 0.000 intron (NM_018990, intron 5 of 7) intron (NM_018990, intron 5 of 7) 12596 NM_018990 54440 Hs.61469 NM_018990 ENSG00000122122 SASH3 753P9|CXorf9|HACS2|SH3D6C|SLY SAM and SH3 domain containing 3 protein-coding chr18-2975 chr18 23059407 23059617 + 6.72 0.000 Intergenic Intergenic -75052 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr18-3526 chr18 75501724 75501934 + 6.72 0.000 Intergenic Intergenic -74126 NM_001037331 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr1-14696 chr1 62937833 62938043 + 6.72 0.000 Intergenic Intergenic 72987 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr2-13532 chr2 151728462 151728672 + 6.72 0.000 intron (NM_001271208, intron 4 of 182) intron (NM_001271208, intron 4 of 182) 5909 NM_001271208 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr2-5076 chr2 10310346 10310556 + 6.72 0.000 intron (NM_134421, intron 1 of 5) intron (NM_134421, intron 1 of 5) 6751 NM_134421 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr2-13381 chr2 138171081 138171291 + 6.72 0.000 Intergenic L1PA16|LINE|L1 69302 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr7-1352 chr7 51086252 51086462 + 6.60 0.000 intron (NM_015198, intron 6 of 12) AluSx1|SINE|Alu 230452 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr5-6542 chr5 11480359 11480569 + 6.60 0.000 intron (NM_001288715, intron 2 of 20) intron (NM_001288715, intron 2 of 20) 108453 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr17-7817 chr17 40522676 40522886 + 6.60 0.000 Intergenic LTR103_Mam|LTR|ERV1? -21158 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr20-4175 chr20 44986253 44986463 + 6.60 0.000 intron (NM_001352385, intron 4 of 11) L2a|LINE|L2 19846 NR_147974 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding chr2-3987 chr2 85181440 85181650 + 6.60 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) -4864 NR_046797 100874334 Hs.693125 NR_046797 ENSG00000231134 TCF7L1-IT1 - TCF7L1 intronic transcript 1 ncRNA chr9-6018 chr9 135607393 135607603 + 6.60 0.000 Intergenic Intergenic 32042 NM_182974 360203 Hs.522491 NM_182974 ENSG00000204007 GLT6D1 GLTDC1|GT6M7 glycosyltransferase 6 domain containing 1 protein-coding chr1-8298 chr1 43619021 43619231 + 6.60 0.000 exon (NM_001329139, exon 26 of 33) exon (NM_001329139, exon 26 of 33) -31023 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr4-7021 chr4 25657899 25658109 + 6.60 0.000 intron (NM_001177999, intron 1 of 12) intron (NM_001177999, intron 1 of 12) 1540 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr6-2749 chr6 110541927 110542137 + 6.60 0.000 Intergenic Intergenic -65419 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr6-6322 chr6 46554391 46554601 + 6.60 0.000 intron (NM_016593, intron 10 of 11) Charlie7a|DNA|hAT-Charlie -62429 NM_001251973 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr8-3055 chr8 4994719 4994929 + 6.60 0.000 promoter-TSS (NM_033225) promoter-TSS (NM_033225) 90 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr3-4666 chr3 41248950 41249160 + 6.60 0.000 intron (NR_136342, intron 34 of 34) intron (NR_136342, intron 34 of 34) 49550 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr8-7152 chr8 122392091 122392301 + 6.60 0.000 Intergenic Intergenic 176448 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr13-3933 chr13 59494563 59494773 + 6.60 0.000 Intergenic Intergenic -518050 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr11-5432 chr11 69402365 69402575 + 6.60 0.000 Intergenic Intergenic -23185 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr10-8947 chr10 117361245 117361455 + 6.60 0.000 intron (NM_173791, intron 1 of 4) intron (NM_173791, intron 1 of 4) 14090 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr1-14733 chr1 66585321 66585531 + 6.60 0.000 intron (NM_001350218, intron 1 of 22) intron (NM_001350218, intron 1 of 22) -43014 NR_036060 100422871 NR_036060 ENSG00000264720 MIR3117 mir-3117 microRNA 3117 ncRNA chr6-5018 chr6 110358550 110358760 + 6.60 0.000 promoter-TSS (NM_001354594) promoter-TSS (NM_001354594) -383 NM_001123364 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr2-8948 chr2 187938316 187938526 + 6.60 0.000 Intergenic Intergenic 349270 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr10-3353 chr10 14820122 14820332 + 6.60 0.000 intron (NM_001029954, intron 3 of 3) intron (NM_001029954, intron 3 of 3) 17810 NM_001029954 441549 Hs.559067 NM_001029954 ENSG00000185267 CDNF ARMETL1 cerebral dopamine neurotrophic factor protein-coding chr6-7218 chr6 40221400 40221610 + 6.60 0.000 Intergenic ERVL-E-int|LTR|ERVL 134501 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr5-5401 chr5 135371790 135372000 + 6.60 0.000 intron (NM_138609, intron 2 of 8) intron (NM_138609, intron 2 of 8) 27343 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr1-7271 chr1 233316587 233316797 + 6.60 0.000 Intergenic L2a|LINE|L2 -11032 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr13-3453 chr13 110226241 110226451 + 6.60 0.000 intron (NM_001845, intron 2 of 51) intron (NM_001845, intron 2 of 51) 80811 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr4-4927 chr4 124345373 124345583 + 6.60 0.000 Intergenic Intergenic 212956 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr5-8058 chr5 93017954 93018164 + 6.60 0.000 Intergenic Intergenic 553284 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr20-4401 chr20 58742747 58742957 + 6.60 0.000 Intergenic Intergenic -30573 NR_134566 105372695 Hs.128204 NR_134566 LOC105372695 - uncharacterized LOC105372695 ncRNA chr15-1745 chr15 49492898 49493108 + 6.60 0.000 intron (NM_001330293, intron 10 of 10) intron (NM_001330293, intron 10 of 10) 69761 NM_002009 2252 Hs.567268 NM_002009 ENSG00000140285 FGF7 HBGF-7|KGF fibroblast growth factor 7 protein-coding chr17-4496 chr17 68462990 68463200 + 6.60 0.000 intron (NM_001278433, intron 1 of 10) intron (NM_001278433, intron 1 of 10) -5571 NM_001320772 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding chr5-8161 chr5 102771685 102771895 + 6.60 0.000 intron (NR_157231, intron 1 of 14) intron (NR_157231, intron 1 of 14) 16485 NM_001364590 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr5-5634 chr5 155259296 155259506 + 6.60 0.000 Intergenic AluSq|SINE|Alu 245646 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr7-6973 chr7 103026289 103026499 + 6.60 0.000 intron (NR_105043, intron 6 of 20) intron (NR_105043, intron 6 of 20) 48174 NM_145032 222235 Hs.660029 NM_145032 ENSG00000161040 FBXL13 DRC6|Fbl13 F-box and leucine rich repeat protein 13 protein-coding chr4-7225 chr4 42999870 43000080 + 6.60 0.000 intron (NM_001080476, intron 2 of 3) Tigger7|DNA|TcMar-Tigger 106709 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr7-4357 chr7 54546554 54546764 + 6.60 0.000 intron (NR_133927, intron 1 of 3) CpG 495 NR_133927 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding chr7-6136 chr7 123499088 123499298 + 6.60 0.000 intron (NR_104245, intron 6 of 11) AluSz|SINE|Alu 33755 NM_001282855 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr1-14965 chr1 88764240 88764450 + 6.60 0.000 intron (NM_006256, intron 3 of 21) L2a|LINE|L2 -79141 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr15-4451 chr15 47160601 47160811 + 6.60 0.000 Intergenic AluSg|SINE|Alu -23383 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr1-7357 chr1 17672948 17673158 + 6.60 0.000 intron (NR_137287, intron 27 of 29) intron (NR_137287, intron 27 of 29) 54740 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr16-4859 chr16 88282602 88282812 + 6.60 0.000 Intergenic Intergenic 88426 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr1-14093 chr1 30539481 30539691 + 6.60 0.000 Intergenic L2b|LINE|L2 -179186 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr8-6423 chr8 58610197 58610407 + 6.60 0.000 intron (NM_001144772, intron 9 of 30) intron (NM_001144772, intron 9 of 30) 49105 NM_001144772 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr8-6663 chr8 80127220 80127430 + 6.60 0.000 intron (NR_105035, intron 1 of 6) intron (NR_105035, intron 1 of 6) 43796 NR_105037 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr18-2543 chr18 174391 174601 + 6.60 0.000 intron (NM_001037334, intron 3 of 14) AluSz|SINE|Alu 15939 NM_005151 9097 Hs.464416 NM_005151 ENSG00000101557 USP14 TGT ubiquitin specific peptidase 14 protein-coding chr1-11086 chr1 228343263 228343473 + 6.60 0.000 intron (NM_052843, intron 75 of 80) L2|LINE|L2 53741 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr5-5261 chr5 121300044 121300254 + 6.60 0.000 Intergenic MLT1A-int|LTR|ERVL-MaLR -22401 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr2-13433 chr2 142742465 142742675 + 6.60 0.000 Intergenic Intergenic -135094 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr9-6936 chr9 97430542 97430752 + 6.60 0.000 intron (NM_014290, intron 2 of 16) MIRb|SINE|MIR 18551 NM_014290 23424 Hs.193842 NM_014290 ENSG00000196116 TDRD7 CATC4|PCTAIRE2BP|TRAP tudor domain containing 7 protein-coding chr14-4364 chr14 24954639 24954849 + 6.60 0.000 intron (NM_001351943, intron 3 of 6) intron (NM_001351943, intron 3 of 6) 94256 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr1-10491 chr1 164824070 164824280 + 6.60 0.000 intron (NM_001353131, intron 7 of 7) intron (NM_001353131, intron 7 of 7) -49534 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chrX-2259 chrX 47997231 47997441 + 6.60 0.000 intron (NM_006962, intron 3 of 6) L1MEf|LINE|L1 6653 NM_006962 7569 Hs.189690 NM_006962 ENSG00000147118 ZNF182 HHZ150|KOX14|ZNF21|Zfp182 zinc finger protein 182 protein-coding chr8-5259 chr8 134269938 134270148 + 6.60 0.000 Intergenic Charlie17a|DNA|hAT-Charlie -328028 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr1-10954 chr1 212688702 212688912 + 6.60 0.000 intron (NM_018664, intron 2 of 2) intron (NM_018664, intron 2 of 2) 11033 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr6-2537 chr6 16168963 16169173 + 6.60 0.000 Intergenic THE1C|LTR|ERVL-MaLR 27512 NR_039782 100616269 NR_039782 ENSG00000263712 MIR4639 - microRNA 4639 ncRNA chr2-8472 chr2 124864731 124864941 + 6.60 0.000 intron (NM_130773, intron 19 of 23) intron (NM_130773, intron 19 of 23) 839549 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr9-7889 chr9 87954336 87954546 + 6.60 0.000 Intergenic Intergenic -15181 NR_149022 497256 Hs.584108 NR_149022 LOC497256 - uncharacterized LOC497256 ncRNA chr9-2969 chr9 1463285 1463495 + 6.60 0.000 Intergenic Intergenic 411903 NR_163472 10655 Hs.59506 NM_006557 ENSG00000173253 DMRT2 - doublesex and mab-3 related transcription factor 2 protein-coding chr1-14686 chr1 62187394 62187604 + 6.60 0.000 Intergenic AluSx1|SINE|Alu -7350 NM_001164835 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr11-10547 chr11 120695951 120696161 + 6.60 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 123059 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr18-1790 chr18 11792641 11792851 + 6.60 0.000 intron (NM_001369387, intron 4 of 11) intron (NM_001369387, intron 4 of 11) 40661 NM_001369387 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr3-5602 chr3 9107584 9107794 + 6.60 0.000 intron (NM_014850, intron 2 of 21) MER5A|DNA|hAT-Charlie -84804 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr11-8011 chr11 13879045 13879255 + 6.60 0.000 Intergenic Intergenic -8534 NR_149109 105376561 Hs.512244 NR_149109 ENSG00000254930 LINC02545 - long intergenic non-protein coding RNA 2545 ncRNA chr3-6842 chr3 149100074 149100284 + 6.60 0.000 intron (NR_046648, intron 2 of 2) (CT)n|Simple_repeat|Simple_repeat -13625 NM_001318934 6596 Hs.3068 NM_003071 ENSG00000071794 HLTF HIP116|HIP116A|HLTF1|RNF80|SMARCA3|SNF2L3|ZBU1 helicase like transcription factor protein-coding chr19-4951 chr19 45016310 45016520 + 6.60 0.000 intron (NM_006509, intron 3 of 10) MER20B|DNA|hAT-Charlie 14951 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr10-6718 chr10 125668137 125668347 + 6.60 0.000 intron (NM_001128202, intron 1 of 3) L1MA3|LINE|L1 14921 NM_001128202 387718 Hs.148259 NM_001128202 ENSG00000175018 TEX36 C10orf122|bA383C5.1 testis expressed 36 protein-coding chr3-5225 chr3 89177205 89177415 + 6.60 0.000 intron (NM_182644, intron 2 of 6) intron (NM_182644, intron 2 of 6) 69689 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr6-6563 chr6 136087947 136088157 + 6.60 0.000 intron (NM_018945, intron 2 of 12) intron (NM_018945, intron 2 of 12) -15225 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr6-3303 chr6 160697559 160697769 + 6.60 0.000 Intergenic AluJb|SINE|Alu -4529 NM_001168338 5340 Hs.143436 NM_000301 ENSG00000122194 PLG - plasminogen protein-coding chrX-3381 chrX 153084472 153084682 + 6.60 0.000 Intergenic Intergenic 12163 NM_032882 84968 Hs.533301 NM_032882 ENSG00000235961 PNMA6A MA6|PNMA6|PNMA6C PNMA family member 6A protein-coding chr4-8304 chr4 143756637 143756847 + 6.60 0.000 Intergenic L1PA7|LINE|L1 -56067 NM_001168235 166752 Hs.252714 NM_001168235 ENSG00000183090 FREM3 - FRAS1 related extracellular matrix 3 protein-coding chr1-6625 chr1 43382309 43382519 + 6.60 0.000 Intergenic Intergenic 7386 NM_052877 112950 Hs.301756 NM_052877 ENSG00000159479 MED8 ARC32 mediator complex subunit 8 protein-coding chr19-6626 chr19 31068805 31069015 + 6.60 0.000 Intergenic Intergenic -98600 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr8-3663 chr8 13914389 13914599 + 6.60 0.000 Intergenic AluSx|SINE|Alu 284804 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr3-7369 chr3 55486924 55487134 + 6.60 0.000 5' UTR (NM_003392, exon 1 of 5) 5' UTR (NM_003392, exon 1 of 5) 613 NM_003392 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr7-9625 chr7 150397910 150398120 + 6.60 0.000 exon (NM_173680, exon 3 of 3) exon (NM_173680, exon 3 of 3) -7737 NR_027237 728743 Hs.650365 NM_001080852 LOC728743 - zinc finger protein pseudogene pseudo chr22-3725 chr22 25838525 25838735 + 6.60 0.000 intron (NM_001318245, intron 17 of 43) Tigger3a|DNA|TcMar-Tigger 96442 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr12-7797 chr12 97810498 97810708 + 6.60 0.000 Intergenic AluYm1|SINE|Alu -54086 NR_077240 643711 Hs.585557 NR_077240 ENSG00000257501 LOC643711 - platelet activating factor acetylhydrolase 1b catalytic subunit 2 pseudogene pseudo chr3-6960 chr3 163164964 163165174 + 6.60 0.000 Intergenic L1MA1|LINE|L1 138232 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr7-5708 chr7 70189801 70190011 + 6.60 0.000 intron (NM_015570, intron 4 of 18) intron (NM_015570, intron 4 of 18) 591431 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr6-6095 chr6 149579617 149579827 + 6.60 0.000 intron (NM_138785, intron 4 of 7) intron (NM_138785, intron 4 of 7) 13347 NM_138785 116254 Hs.438872 NM_138785 ENSG00000055211 GINM1 C6orf72 glycoprotein integral membrane 1 protein-coding chr16-6841 chr16 82102344 82102554 + 6.60 0.000 Intergenic Intergenic 67196 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chr4-3730 chr4 76703000 76703210 + 6.60 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 127554 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr11-5283 chr11 36861997 36862207 + 6.60 0.000 Intergenic Intergenic -263823 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr1-10834 chr1 204035808 204036018 + 6.60 0.000 intron (NR_027902, intron 4 of 5) L2b|LINE|L2 5351 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr17-5060 chr17 3094117 3094327 + 6.60 0.000 Intergenic Intergenic -1226 NM_002548 4991 Hs.532771 NM_002548 ENSG00000184166 OR1D2 OLFR1|OR17-4 olfactory receptor family 1 subfamily D member 2 protein-coding chr9-7471 chr9 28286298 28286508 + 6.60 0.000 intron (NM_152570, intron 5 of 6) L1PA13|LINE|L1 432902 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr20-2580 chr20 37867179 37867389 + 6.60 0.000 intron (NM_001281495, intron 16 of 16) (TCC)n|Simple_repeat|Simple_repeat -35843 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr15-4038 chr15 62835709 62835919 + 6.60 0.000 intron (NM_015059, intron 53 of 55) intron (NM_015059, intron 53 of 55) 11857 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr7-9611 chr7 149299576 149299786 + 6.60 0.000 Intergenic Intergenic 14400 NR_036573 155060 Hs.490512 NR_015357 ENSG00000244560 LOC155060 - AI894139 pseudogene pseudo chr10-8161 chr10 71041809 71042019 + 6.60 0.000 Intergenic Intergenic 102861 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr10-3606 chr10 92867573 92867783 + 6.60 0.000 intron (NM_001319195, intron 1 of 21) LTR37A|LTR|ERV1 19158 NM_019053 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr2-12707 chr2 79353713 79353923 + 6.60 0.000 Intergenic L1PA16|LINE|L1 147026 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA chr2-12655 chr2 74314405 74314615 + 6.60 0.000 intron (NM_133478, intron 6 of 30) intron (NM_133478, intron 6 of 30) 515 NM_021196 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr3-10845 chr3 166073126 166073336 + 6.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR -235808 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr17-5568 chr17 45006044 45006254 + 6.60 0.000 Intergenic Intergenic -37846 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr2-11521 chr2 238962459 238962669 + 6.60 0.000 Intergenic L1PB1|LINE|L1 -36295 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr1-14572 chr1 53316194 53316404 + 6.60 0.000 intron (NM_004631, intron 2 of 18) intron (NM_004631, intron 2 of 18) 11771 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr10-5968 chr10 123510787 123510997 + 6.60 0.000 Intergenic Intergenic -155463 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr2-7995 chr2 66901574 66901784 + 6.60 0.000 Intergenic Intergenic -2757 NR_110169 101060019 Hs.116425 NR_110169 ENSG00000230525 LINC01799 - long intergenic non-protein coding RNA 1799 ncRNA chr3-5509 chr3 195551498 195551708 + 6.60 0.000 Intergenic Intergenic -8278 NM_006241 5504 Hs.535731 NM_006241 ENSG00000184203 PPP1R2 IPP-2|IPP2|PPP1R2A protein phosphatase 1 regulatory inhibitor subunit 2 protein-coding chr4-7978 chr4 113574559 113574769 + 6.60 0.000 intron (NM_001221, intron 4 of 18) intron (NM_001221, intron 4 of 18) 187074 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr2-9204 chr2 217062736 217062946 + 6.60 0.000 Intergenic Intergenic 192069 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr14-4242 chr14 101329891 101330101 + 6.60 0.000 Intergenic Intergenic 77926 NR_126006 338002 Hs.124848 NR_126006 ENSG00000259023 LINC00524 C14orf71 long intergenic non-protein coding RNA 524 ncRNA chr14-5249 chr14 99554659 99554869 + 6.60 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 49443 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr4-4502 chr4 60899180 60899390 + 6.60 0.000 Intergenic L1MC2|LINE|L1 -23334 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr7-8696 chr7 74210874 74211084 + 6.60 0.000 intron (NM_014146, intron 1 of 12) intron (NM_014146, intron 1 of 12) 973 NM_032463 7462 Hs.741249 NM_014146 ENSG00000086730 LAT2 HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 linker for activation of T cells family member 2 protein-coding chr8-3452 chr8 93333853 93334063 + 6.60 0.000 Intergenic Intergenic -167108 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr2-14026 chr2 192291276 192291486 + 6.60 0.000 Intergenic Charlie3|DNA|hAT-Charlie -96448 NM_001305134 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr5-8865 chr5 153722034 153722244 + 6.60 0.000 intron (NM_000827, intron 11 of 15) L1ME3A|LINE|L1 176848 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr2-9070 chr2 201949666 201949876 + 6.60 0.000 Intergenic Intergenic -84816 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr17-8249 chr17 66366444 66366654 + 6.60 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 50305 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr1-15662 chr1 165325285 165325495 + 6.60 0.000 intron (NM_177398, intron 3 of 8) intron (NM_177398, intron 3 of 8) 30851 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr5-8236 chr5 110086858 110087068 + 6.60 0.000 Intergenic Intergenic 203781 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr1-10264 chr1 119914114 119914324 + 6.60 0.000 3' UTR (NM_024408, exon 34 of 34) 3' UTR (NM_024408, exon 34 of 34) -17704 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr3-4532 chr3 123391658 123391868 + 6.60 0.000 intron (NM_183357, intron 1 of 20) MER91C|DNA|hAT-Tip100 24579 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chrX-2571 chrX 103168302 103168512 + 6.60 0.000 Intergenic AluJb|SINE|Alu -46685 NM_001127688 56271 Hs.184736 NM_001080425 ENSG00000102409 BEX4 BEXL1 brain expressed X-linked 4 protein-coding chr2-6591 chr2 234399808 234400018 + 6.60 0.000 Intergenic MIRb|SINE|MIR 54682 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chrX-1432 chrX 48971792 48972002 + 6.60 0.000 promoter-TSS (NM_004979) promoter-TSS (NM_004979) -53 NM_004979 3750 Hs.55276 NM_004979 ENSG00000102057 KCND1 KV4.1 potassium voltage-gated channel subfamily D member 1 protein-coding chr4-6927 chr4 16304183 16304393 + 6.60 0.000 Intergenic Intergenic 77625 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr2-3446 chr2 110115705 110115915 + 6.60 0.000 5' UTR (NM_005434, exon 1 of 4) 5' UTR (NM_005434, exon 1 of 4) 756 NM_005434 7851 Hs.185055 NM_005434 ENSG00000144063 MALL BENE mal, T cell differentiation protein like protein-coding chr8-5711 chr8 129034968 129035178 + 6.60 0.000 Intergenic Intergenic -69072 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA chr5-7135 chr5 1825497 1825707 + 6.60 0.000 Intergenic Intergenic 24195 NM_004553 4726 Hs.408257 NM_004553 ENSG00000145494 NDUFS6 CI-13kA|CI-13kD-A|CI13KDA|MC1DN9 NADH:ubiquinone oxidoreductase subunit S6 protein-coding chr9-7176 chr9 135301456 135301666 + 6.60 0.000 Intergenic Intergenic -41688 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr8-5240 chr8 127420912 127421122 + 6.60 0.000 intron (NR_117100, intron 4 of 5) intron (NR_117100, intron 4 of 5) 5192 NM_001159542 5462 Hs.450254 NM_001159542 ENSG00000212993 POU5F1B OCT4-PG1|OCT4PG1|OTF3C|OTF3P1|POU5F1P1|POU5F1P4|POU5FLC20|POU5FLC8 POU class 5 homeobox 1B protein-coding chr3-10905 chr3 171565870 171566080 + 6.60 0.000 Intergenic Intergenic -105567 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr19-3730 chr19 43662626 43662836 + 6.60 0.000 intron (NM_001005376, intron 3 of 6) AluJr|SINE|Alu 7438 NM_001005377 5329 Hs.466871 NM_002659 ENSG00000011422 PLAUR CD87|U-PAR|UPAR|URKR plasminogen activator, urokinase receptor protein-coding chr1-13287 chr1 229683521 229683731 + 6.60 0.000 Intergenic L1M1|LINE|L1 57379 NM_014777 9816 Hs.533628 NM_014777 ENSG00000135763 URB2 KIAA0133|NET10|NPA2 URB2 ribosome biogenesis homolog protein-coding chr11-9993 chr11 78784916 78785126 + 6.60 0.000 intron (NM_001098816, intron 16 of 33) intron (NM_001098816, intron 16 of 33) -210157 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr5-7746 chr5 60490673 60490883 + 6.60 0.000 non-coding (NR_028508, exon 2 of 2) non-coding (NR_028508, exon 2 of 2) -2713 NM_001165899 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-16512 chr1 230294040 230294250 + 6.60 0.000 Intergenic Intergenic 132187 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr5-8618 chr5 139310924 139311134 + 6.60 0.000 intron (NM_018834, intron 2 of 14) AluSp|SINE|Alu 17279 NM_001194956 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding chr14-5235 chr14 98939320 98939530 + 6.60 0.000 Intergenic Intergenic 227812 NR_161368 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr8-6471 chr8 62144289 62144499 + 6.60 0.000 Intergenic CpG -104460 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr6-5489 chr6 162975863 162976073 + 6.60 0.000 intron (NM_001080379, intron 2 of 4) intron (NM_001080379, intron 2 of 4) 78193 NR_110872 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr11-8255 chr11 67619968 67620178 + 6.60 0.000 Intergenic LTR12C|LTR|ERV1 -4409 NR_033791 390213 Hs.523838 NR_033791 DOC2GP - double C2 domain gamma, pseudogene pseudo chr1-6056 chr1 88460990 88461200 + 6.60 0.000 Intergenic Intergenic -223049 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1-14894 chr1 82423053 82423263 + 6.60 0.000 Intergenic Intergenic -480025 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr9-7351 chr9 15191320 15191530 + 6.60 0.000 intron (NM_001168342, intron 7 of 17) intron (NM_001168342, intron 7 of 17) 58793 NM_001168342 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr22-4220 chr22 46400782 46400992 + 6.60 0.000 intron (NM_014246, intron 9 of 34) AluSz6|SINE|Alu 65173 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr2-10334 chr2 157761571 157761781 + 6.60 0.000 intron (NM_001111067, intron 8 of 10) intron (NM_001111067, intron 8 of 10) 76954 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr2-12067 chr2 31692030 31692240 + 6.60 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -111197 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr4-1502 chr4 49634244 49634454 + 6.60 0.000 Intergenic (GAATG)n|Satellite|Satellite 647707 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chrX-3070 chrX 113863370 113863580 + 6.60 0.000 intron (NR_131204, intron 1 of 2) L1PA10|LINE|L1 74743 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr7-7893 chr7 6420453 6420663 + 6.60 0.000 intron (NM_001142936, intron 7 of 12) L1MB4|LINE|L1 27396 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr10-9165 chr10 129353713 129353923 + 6.60 0.000 Intergenic L1ME3D|LINE|L1 -113423 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr3-8728 chr3 194254290 194254500 + 6.60 0.000 intron (NR_125402, intron 2 of 3) MIR1_Amn|SINE|MIR -4242 NR_125403 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chr7-4510 chr7 845836 846046 + 6.60 0.000 intron (NM_025154, intron 5 of 17) intron (NM_025154, intron 5 of 17) 4567 NM_001367708 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr21-1177 chr21 42583252 42583462 + 6.60 0.000 Intergenic MER5C|DNA|hAT-Charlie 31738 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chr11-7166 chr11 128759642 128759852 + 6.60 0.000 intron (NM_001271012, intron 2 of 6) L2|LINE|L2 -63724 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr2-6444 chr2 156565285 156565495 + 6.60 0.000 intron (NM_000408, intron 9 of 16) intron (NM_000408, intron 9 of 16) 129011 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr22-4206 chr22 46260316 46260526 + 6.60 0.000 exon (NM_006071, exon 1 of 1) exon (NM_006071, exon 1 of 1) 2922 NM_006071 10343 Hs.241383 NM_006071 ENSG00000130943 PKDREJ - polycystin family receptor for egg jelly protein-coding chr11-6881 chr11 102683438 102683648 + 6.60 0.000 Intergenic Intergenic 22226 NM_022122 64066 Hs.534479 NM_022122 ENSG00000137675 MMP27 MMP-27 matrix metallopeptidase 27 protein-coding chr22-3401 chr22 36208085 36208295 + 6.60 0.000 Intergenic MIRc|SINE|MIR -3357 NM_030643 80832 Hs.115099 NM_030643 ENSG00000100336 APOL4 APOL-IV|APOLIV apolipoprotein L4 protein-coding chr12-4755 chr12 52413338 52413548 + 6.60 0.000 Intergenic Intergenic -7051 NM_033033 3888 Hs.134640 NM_033033 ENSG00000161850 KRT82 HB2|Hb-2|KRTHB2 keratin 82 protein-coding chr21-1464 chr21 33633299 33633509 + 6.60 0.000 intron (NM_145858, intron 1 of 12) intron (NM_145858, intron 1 of 12) 8337 NM_145858 9946 Hs.352671 NM_145311 ENSG00000205758 CRYZL1 4P11|QOH-1 crystallin zeta like 1 protein-coding chr17-6501 chr17 29059597 29059807 + 6.60 0.000 Intergenic L1MB2|LINE|L1 15907 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr15-3834 chr15 78625278 78625488 + 6.60 0.000 intron (NM_001256567, intron 4 of 4) intron (NM_001256567, intron 4 of 4) -4387 NM_000743 1136 Hs.89605 NM_000743 ENSG00000080644 CHRNA3 LNCR2|NACHRA3|PAOD2 cholinergic receptor nicotinic alpha 3 subunit protein-coding chr19-6405 chr19 13662694 13662904 + 6.60 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -68953 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr2-6094 chr2 190343849 190344059 + 6.60 0.000 5' UTR (NM_001128928, exon 1 of 7) 5' UTR (NM_001128928, exon 1 of 7) 365 NM_001128928 3628 Hs.32309 NM_002194 ENSG00000151689 INPP1 - inositol polyphosphate-1-phosphatase protein-coding chr2-8626 chr2 144086904 144087114 + 6.60 0.000 intron (NM_001354355, intron 7 of 13) intron (NM_001354355, intron 7 of 13) 124570 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr8-6081 chr8 26679009 26679219 + 6.60 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 100709 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr11-3746 chr11 35787256 35787466 + 6.60 0.000 intron (NM_017583, intron 4 of 4) intron (NM_017583, intron 4 of 4) 124586 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr1-11935 chr1 62922970 62923180 + 6.60 0.000 Intergenic L1PREC2|LINE|L1 87850 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr2-14317 chr2 217673201 217673411 + 6.60 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 83287 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr12-4582 chr12 30985959 30986169 + 6.60 0.000 intron (NM_001370301, intron 6 of 6) intron (NM_001370301, intron 6 of 6) 59160 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr1-12892 chr1 110750190 110750400 + 6.60 0.000 Intergenic Intergenic -75355 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding chr20-4495 chr20 63137183 63137393 + 6.60 0.000 Intergenic L1MB7|LINE|L1 -34969 NR_003245 768097 Hs.635159 NR_003245 ENSG00000231133 HAR1B HAR1R|LINC00065|NCRNA00065 highly accelerated region 1B ncRNA chr1-9249 chr1 24126410 24126620 + 6.60 0.000 intron (NM_021258, intron 5 of 6) MIRc|SINE|MIR -14380 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr20-2305 chr20 6385994 6386204 + 6.60 0.000 Intergenic Intergenic -40633 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr17-3452 chr17 34616460 34616670 + 6.60 0.000 intron (NM_001304438, intron 1 of 8) intron (NM_001304438, intron 1 of 8) 35816 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr1-8941 chr1 8321342 8321552 + 6.60 0.000 intron (NM_001080397, intron 1 of 8) intron (NM_001080397, intron 1 of 8) 3362 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr10-9092 chr10 125864264 125864474 + 6.60 0.000 intron (NM_018180, intron 2 of 10) intron (NM_018180, intron 2 of 10) 16923 NM_018180 55760 Hs.370292 NM_018180 ENSG00000089876 DHX32 DDX32|DHLP1 DEAH-box helicase 32 (putative) protein-coding chr7-7210 chr7 18247146 18247356 + 6.60 0.000 intron (NM_001321872, intron 2 of 11) L2a|LINE|L2 -42841 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr2-13349 chr2 134995129 134995339 + 6.60 0.000 intron (NM_001018044, intron 3 of 7) AluJr|SINE|Alu 28415 NM_001321177 80122 Hs.659395 NM_025052 ENSG00000176601 MAP3K19 RCK|YSK4 mitogen-activated protein kinase kinase kinase 19 protein-coding chr4-8248 chr4 139501906 139502116 + 6.60 0.000 intron (NM_001306199, intron 7 of 7) intron (NM_001306199, intron 7 of 7) 47890 NM_031296 83452 Hs.591679 NM_031296 ENSG00000172007 RAB33B SMC2 RAB33B, member RAS oncogene family protein-coding chr8-7241 chr8 127916904 127917114 + 6.60 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 31714 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr20-1629 chr20 17562961 17563171 + 6.60 0.000 5' UTR (NM_001278608, exon 2 of 10) 5' UTR (NM_001278608, exon 2 of 10) -4233 NM_001278607 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr2-9002 chr2 194983803 194984013 + 6.60 0.000 Intergenic L1MA4|LINE|L1 253313 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr1-14235 chr1 36322334 36322544 + 6.60 0.000 exon (NM_018166, exon 3 of 3) exon (NM_018166, exon 3 of 3) 1206 NR_130899 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr18-1004 chr18 37145139 37145349 + 6.60 0.000 intron (NR_136303, intron 8 of 13) L1MEf|LINE|L1 -129216 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chrX-3926 chrX 9676540 9676750 + 6.60 0.000 intron (NM_001139466, intron 5 of 17) intron (NM_001139466, intron 5 of 17) 89202 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr11-9379 chr11 50739539 50739749 + 6.60 0.000 Intergenic ALR/Alpha|Satellite|centr 330497 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo chr14-4688 chr14 57155498 57155708 + 6.60 0.000 Intergenic Intergenic 113302 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding chr20-4151 chr20 44093152 44093362 + 6.60 0.000 Intergenic Intergenic 93931 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr10-5627 chr10 95741335 95741545 + 6.60 0.000 intron (NM_001098175, intron 1 of 9) Tigger1|DNA|TcMar-Tigger -14212 NM_001164178 953 Hs.576612 NM_001776 ENSG00000138185 ENTPD1 ATPDase|CD39|NTPDase-1|SPG64 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding chr5-8037 chr5 90776197 90776407 + 6.60 0.000 intron (NR_003149, intron 60 of 89) MIR|SINE|MIR 217505 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr13-3351 chr13 74129952 74130162 + 6.60 0.000 intron (NM_007249, intron 1 of 7) intron (NM_007249, intron 1 of 7) 3872 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chrX-1500 chrX 4133551 4133761 + 6.60 0.000 Intergenic AluSp|SINE|Alu -212914 NR_146579 729162 Hs.657302 NR_146578 FAM239B - zinc finger protein 839 pseudogene pseudo chr18-3101 chr18 35820059 35820269 + 6.60 0.000 Intergenic HAL1|LINE|L1 84762 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr13-3979 chr13 64030571 64030781 + 6.60 0.000 intron (NR_145420, intron 2 of 5) intron (NR_145420, intron 2 of 5) 45335 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr9-8104 chr9 98861776 98861986 + 6.60 0.000 Intergenic MIR|SINE|MIR 54211 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chr5-9090 chr5 172337782 172337992 + 6.60 0.000 3' UTR (NM_001017995, exon 13 of 13) 3' UTR (NM_001017995, exon 13 of 13) 52290 NR_130933 100288254 Hs.531911 NM_001007542 LOC100288254 - uncharacterized LOC100288254 ncRNA chr5-4593 chr5 29646007 29646217 + 6.60 0.000 Intergenic L1PA16|LINE|L1 -234448 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chr15-4535 chr15 55591882 55592092 + 6.60 0.000 Intergenic L2c|LINE|L2 -3016 NM_015617 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr4-8028 chr4 118788703 118788913 + 6.60 0.000 intron (NM_014822, intron 8 of 22) intron (NM_014822, intron 8 of 22) 47318 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr10-7895 chr10 49951086 49951296 + 6.60 0.000 intron (NR_158651, intron 2 of 7) intron (NR_158651, intron 2 of 7) -3021 NR_145778 109617009 NR_145778 SNORA74C-2 - small nucleolar RNA, H/ACA box 74C-2 snoRNA chr1-7536 chr1 177598691 177598901 + 6.60 0.000 Intergenic Intergenic -101728 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr10-7525 chr10 14270996 14271206 + 6.60 0.000 intron (NR_134578, intron 2 of 3) MSTB|LTR|ERVL-MaLR 59783 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr11-8519 chr11 125326289 125326499 + 6.60 0.000 intron (NM_022062, intron 2 of 12) L2c|LINE|L2 161643 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr22-3350 chr22 24417962 24418172 + 6.60 0.000 TTS (NM_001254732) TTS (NM_001254732) -5530 NM_001278500 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chrX-2455 chrX 81907197 81907407 + 6.60 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 705200 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr3-10614 chr3 145379005 145379215 + 6.60 0.000 Intergenic L1M1|LINE|L1 690075 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr10-5869 chr10 115534048 115534258 + 6.60 0.000 intron (NM_207303, intron 25 of 28) L1PA3|LINE|L1 440788 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr4-6949 chr4 18208120 18208330 + 6.60 0.000 Intergenic L1PA15|LINE|L1 -186350 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr4-3379 chr4 22364165 22364375 + 6.60 0.000 Intergenic Intergenic -24604 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr7-5263 chr7 20241107 20241317 + 6.60 0.000 Intergenic Intergenic 23635 NR_134568 100506098 Hs.59203 NR_134567 ENSG00000233834 LOC100506098 - uncharacterized LOC100506098 ncRNA chr3-8285 chr3 54988813 54989023 + 6.60 0.000 intron (NM_018398, intron 31 of 37) intron (NM_018398, intron 31 of 37) -21816 NM_001304389 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr5-6767 chr5 84109792 84110002 + 6.60 0.000 intron (NM_001278642, intron 4 of 9) MIRc|SINE|MIR 274970 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr10-3697 chr10 106439851 106440061 + 6.60 0.000 Intergenic AluSx1|SINE|Alu 299791 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr11-3865 chr11 77174443 77174653 + 6.60 0.000 intron (NM_001127180, intron 16 of 48) L2b|LINE|L2 46302 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr1-15737 chr1 171366892 171367102 + 6.60 0.000 Intergenic Intergenic 28101 NR_002719 7151 Hs.661092 NR_002719 TOP1P1 - DNA topoisomerase I pseudogene 1 pseudo chr4-5746 chr4 56811875 56812085 + 6.60 0.000 intron (NM_001271721, intron 1 of 2) AluSx|SINE|Alu 9493 NR_073417 6691 Hs.98243 NM_021114 ENSG00000128040 SPINK2 HUSI-II|SPGF29 serine peptidase inhibitor, Kazal type 2 protein-coding chr5-5946 chr5 91367448 91367658 + 6.60 0.000 Intergenic AluJr|SINE|Alu 12544 NR_138071 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr8-6538 chr8 68508742 68508952 + 6.60 0.000 intron (NR_146187, intron 4 of 13) MER61A|LTR|ERV1 -177356 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr6-6023 chr6 114200159 114200369 + 6.60 0.000 intron (NR_125845, intron 8 of 9) MER67C|LTR|ERV1 -137387 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr15-3527 chr15 100036230 100036440 + 6.60 0.000 intron (NM_139057, intron 18 of 21) intron (NM_139057, intron 18 of 21) 229312 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr1-11399 chr1 52112427 52112637 + 6.60 0.000 Intergenic Intergenic -29557 NM_007324 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr19-3294 chr19 4103393 4103603 + 6.60 0.000 intron (NM_030662, intron 3 of 10) intron (NM_030662, intron 3 of 10) 20631 NM_030662 5605 Hs.465627 NM_030662 ENSG00000126934 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding chr9-6752 chr9 19302757 19302967 + 6.60 0.000 intron (NR_073201, intron 9 of 31) L2a|LINE|L2 72169 NM_017925 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr10-1949 chr10 15528397 15528607 + 6.60 0.000 intron (NM_001291494, intron 27 of 28) intron (NM_001291494, intron 27 of 28) -157213 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr8-6064 chr8 25570304 25570514 + 6.60 0.000 Intergenic Intergenic 111176 NM_152562 157313 Hs.33366 NM_152562 ENSG00000184661 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding chr1-3434 chr1 11785131 11785341 + 6.60 0.000 TTS (NM_005957) TTS (NM_005957) -5617 NR_126000 102724659 Hs.737635 NR_126000 ENSG00000177553 LOC102724659 - uncharacterized LOC102724659 ncRNA chr2-11409 chr2 218756383 218756593 + 6.60 0.000 Intergenic Intergenic -25659 NM_000784 1593 Hs.516700 NM_000784 ENSG00000135929 CYP27A1 CP27|CTX|CYP27 cytochrome P450 family 27 subfamily A member 1 protein-coding chr12-7833 chr12 101040955 101041165 + 6.60 0.000 intron (NM_001286616, intron 10 of 26) intron (NM_001286616, intron 10 of 26) -97498 NR_049838 100847078 NR_049838 ENSG00000265470 MIR548AQ - microRNA 548aq ncRNA chr17-6605 chr17 58270487 58270697 + 6.60 0.000 3' UTR (NM_000250, exon 12 of 12) 3' UTR (NM_000250, exon 12 of 12) 10343 NM_000250 4353 Hs.458272 NM_000250 ENSG00000005381 MPO - myeloperoxidase protein-coding chrX-5025 chrX 119579494 119579704 + 6.60 0.000 intron (NM_181762, intron 3 of 4) MIR|SINE|MIR 5036 NM_181762 7319 Hs.379466 NM_003336 ENSG00000077721 UBE2A HHR6A|MRXS30|MRXSN|RAD6A|UBC2 ubiquitin conjugating enzyme E2 A protein-coding chr22-2818 chr22 43230148 43230358 + 6.60 0.000 intron (NM_173050, intron 8 of 21) intron (NM_173050, intron 8 of 21) 17579 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr9-7441 chr9 25818401 25818611 + 6.60 0.000 Intergenic Intergenic 38450 NR_121604 101929582 Hs.140547 NR_121604 ENSG00000236306 LINC01241 - long intergenic non-protein coding RNA 1241 ncRNA chr2-7014 chr2 148896331 148896541 + 6.60 0.000 intron (NM_004522, intron 1 of 25) intron (NM_004522, intron 1 of 25) 21209 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr21-1061 chr21 29743363 29743573 + 6.60 0.000 intron (NM_000830, intron 1 of 16) AluSx|SINE|Alu -4707 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA chrX-2689 chrX 118830113 118830323 + 6.60 0.000 Intergenic MIRb|SINE|MIR 6394 NM_001312891 170261 Hs.21417 NM_173798 ENSG00000174460 ZCCHC12 PNMA7A|SIZN|SIZN1 zinc finger CCHC-type containing 12 protein-coding chr5-8895 chr5 155774108 155774318 + 6.60 0.000 Intergenic Intergenic -552544 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr2-9126 chr2 207768855 207769065 + 6.60 0.000 5' UTR (NM_003468, exon 2 of 2) 5' UTR (NM_003468, exon 2 of 2) 946 NM_003468 7855 Hs.17631 NM_003468 ENSG00000163251 FZD5 C2orf31|HFZ5 frizzled class receptor 5 protein-coding chr8-5925 chr8 18451017 18451227 + 6.60 0.000 Intergenic L2c|LINE|L2 59840 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr2-11243 chr2 170172035 170172245 + 6.60 0.000 Intergenic Intergenic -6007 NR_045684 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr17-5305 chr17 27321466 27321676 + 6.60 0.000 Intergenic Intergenic 27457 NM_015626 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding chr12-2661 chr12 29148691 29148901 + 6.60 0.000 promoter-TSS (NM_001271783) promoter-TSS (NM_001271783) -482 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr22-3345 chr22 23639843 23640053 + 6.60 0.000 intron (NR_024448, intron 11 of 11) intron (NR_024448, intron 11 of 11) -7627 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr17-5456 chr17 39875831 39876041 + 6.60 0.000 intron (NM_198844, intron 6 of 6) AluSz|SINE|Alu 7734 NM_199321 124626 Hs.367245 NM_198844 ENSG00000186075 ZPBP2 ZPBPL zona pellucida binding protein 2 protein-coding chr3-7349 chr3 49780807 49781017 + 6.60 0.000 intron (NM_153273, intron 1 of 5) intron (NM_153273, intron 1 of 5) 5282 NM_001242829 9807 Hs.386168 NM_153273 ENSG00000176095 IP6K1 IHPK1|PiUS inositol hexakisphosphate kinase 1 protein-coding chr9-4894 chr9 6263990 6264200 + 6.60 0.000 Intergenic L1PA5|LINE|L1 15624 NM_001353802 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr5-8066 chr5 94362022 94362232 + 6.60 0.000 intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) -250428 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr18-1684 chr18 76770389 76770599 + 6.60 0.000 Intergenic Intergenic 51801 NR_040024 100131655 Hs.385806 NR_040024 ENSG00000264278 ZNF236-DT - ZNF236 divergent transcript ncRNA chr4-7514 chr4 74865528 74865738 + 6.60 0.000 Intergenic L1PA8|LINE|L1 -67483 NM_015393 25849 Hs.105460 NM_015393 ENSG00000169116 PARM1 Cipar1|DKFZP564O0823|PARM-1|WSC4 prostate androgen-regulated mucin-like protein 1 protein-coding chr3-5824 chr3 30891278 30891488 + 6.60 0.000 intron (NM_207359, intron 1 of 14) intron (NM_207359, intron 1 of 14) 3278 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr20-2670 chr20 45138394 45138604 + 6.60 0.000 Intergenic Intergenic -14034 NM_080869 128488 Hs.352180 NM_080869 ENSG00000168703 WFDC12 C20orf122|SWAM2|WAP2|dJ211D12.4 WAP four-disulfide core domain 12 protein-coding chr9-6741 chr9 15065323 15065533 + 6.60 0.000 Intergenic AluSx4|SINE|Alu 72101 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr1-10984 chr1 216453501 216453711 + 6.60 0.000 Intergenic Intergenic -30158 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr6-4534 chr6 39745864 39746074 + 6.60 0.000 Intergenic L3|LINE|CR1 -20546 NM_001351503 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr4-8259 chr4 140094053 140094263 + 6.60 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -33857 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr5-7060 chr5 171209689 171209899 + 6.60 0.000 intron (NM_022897, intron 20 of 27) L2c|LINE|L2 -99454 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr14-4799 chr14 66247975 66248185 + 6.60 0.000 Intergenic Intergenic -238291 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr4-4121 chr4 7095896 7096106 + 6.60 0.000 Intergenic Intergenic 7375 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr8-4901 chr8 85204997 85205207 + 6.60 0.000 intron (NM_001083588, intron 3 of 7) AluSx|SINE|Alu 15272 NR_120681 401466 Hs.443072 NM_001099670 ENSG00000176731 RBIS C8orf59 ribosomal biogenesis factor protein-coding chr20-3691 chr20 14289023 14289233 + 6.60 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) 48484 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr3-10052 chr3 105466777 105466987 + 6.60 0.000 intron (NM_001243280, intron 1 of 14) intron (NM_001243280, intron 1 of 14) 99973 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr5-4166 chr5 100905369 100905579 + 6.60 0.000 Intergenic L2c|LINE|L2 -2192 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr4-8333 chr4 146098552 146098762 + 6.60 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 23256 NR_038331 100505545 Hs.122199 NR_038331 ENSG00000248809 LINC01095 - long intergenic non-protein coding RNA 1095 ncRNA chr3-9325 chr3 45328181 45328391 + 6.60 0.000 Intergenic Intergenic -60290 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr1-11374 chr1 42146987 42147197 + 6.60 0.000 Intergenic Intergenic -6318 NM_007102 2981 Hs.32966 NM_007102 ENSG00000044012 GUCA2B GCAP-II|UGN guanylate cyclase activator 2B protein-coding chr8-6275 chr8 42050258 42050468 + 6.60 0.000 intron (NM_001305878, intron 1 of 13) intron (NM_001305878, intron 1 of 13) -1387 NR_136589 105379393 Hs.742878 NR_136589 LOC105379393 - uncharacterized LOC105379393 ncRNA chr5-7720 chr5 58769250 58769460 + 6.60 0.000 intron (NM_138453, intron 3 of 4) L2a|LINE|L2 186280 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr10-9003 chr10 121597449 121597659 + 6.60 0.000 promoter-TSS (NM_001144915) promoter-TSS (NM_001144915) 890 NM_001144917 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr3-8126 chr3 24014804 24015014 + 6.60 0.000 Intergenic AluSg7|SINE|Alu 68788 NM_001145425 9975 Hs.37288 NM_005126 ENSG00000174738 NR1D2 BD73|EAR-1R|REVERBB|REVERBbeta|RVR nuclear receptor subfamily 1 group D member 2 protein-coding chr11-10747 chr11 133489708 133489918 + 6.60 0.000 intron (NM_001012393, intron 1 of 7) L1PB4|LINE|L1 42688 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr6-7418 chr6 52970553 52970763 + 6.60 0.000 Intergenic Intergenic 24626 NM_001512 2941 Hs.485557 NM_001512 ENSG00000170899 GSTA4 GSTA4-4|GTA4 glutathione S-transferase alpha 4 protein-coding chr2-13592 chr2 157350179 157350389 + 6.60 0.000 Intergenic Intergenic -22572 NM_001009959 57471 Hs.443894 NM_020711 ENSG00000136541 ERMN JN|KIAA1189 ermin protein-coding chr5-3136 chr5 59709865 59710075 + 6.60 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) -6267 NR_030308 693167 NR_030308 ENSG00000202601 MIR582 MIRN582|hsa-mir-582 microRNA 582 ncRNA chr5-8558 chr5 136028857 136029067 + 6.60 0.000 promoter-TSS (NM_000358) promoter-TSS (NM_000358) -26 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding chr8-1638 chr8 104588013 104588223 + 6.60 0.000 intron (NM_013437, intron 1 of 6) intron (NM_013437, intron 1 of 6) 906 NM_001135703 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr4-4836 chr4 109169341 109169551 + 6.60 0.000 intron (NM_198721, intron 3 of 36) L2c|LINE|L2 133212 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr6-4297 chr6 14346354 14346564 + 6.60 0.000 Intergenic MER91A|DNA|hAT-Tip100 -61005 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr9-7947 chr9 90960860 90961070 + 6.60 0.000 Intergenic MLT1E|LTR|ERVL-MaLR 114167 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr3-7783 chr3 78500896 78501106 + 6.60 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -452038 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr2-9861 chr2 185981607 185981817 + 6.60 0.000 Intergenic LTR26|LTR|ERV1 104605 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr8-6076 chr8 26496425 26496635 + 6.60 0.000 Intergenic L1MEc|LINE|L1 17342 NM_007257 10687 Hs.591838 NM_007257 ENSG00000240694 PNMA2 MA2|MM2|RGAG2 PNMA family member 2 protein-coding chr20-2835 chr20 60335205 60335415 + 6.60 0.000 Intergenic L1MC1|LINE|L1 26836 NR_030376 693231 NR_030376 ENSG00000207802 MIR646 MIRN646|hsa-mir-646 microRNA 646 ncRNA chr18-2223 chr18 67143693 67143903 + 6.60 0.000 Intergenic Intergenic 62214 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr2-5103 chr2 17540514 17540724 + 6.60 0.000 promoter-TSS (NM_001366805) promoter-TSS (NM_001366805) -77 NM_001366806 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr12-7487 chr12 66681673 66681883 + 6.60 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) -2702 NM_021150 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chrX-3266 chrX 86960319 86960529 + 6.60 0.000 Intergenic L1PA13|LINE|L1 -557378 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr22-3686 chr22 24127541 24127751 + 6.60 0.000 intron (NM_012295, intron 28 of 36) intron (NM_012295, intron 28 of 36) -53841 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr5-7016 chr5 156950466 156950676 + 6.60 0.000 intron (NM_138379, intron 3 of 8) intron (NM_138379, intron 3 of 8) 12655 NM_001146726 91937 Hs.334907 NM_138379 ENSG00000145850 TIMD4 SMUCKLER|TIM4 T cell immunoglobulin and mucin domain containing 4 protein-coding chr13-4055 chr13 75617855 75618065 + 6.60 0.000 intron (NR_120412, intron 1 of 1) L1MA3|LINE|L1 -2474 NM_005358 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr5-5326 chr5 128773524 128773734 + 6.60 0.000 Intergenic Intergenic -191498 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr16-6729 chr16 73294137 73294347 + 6.60 0.000 Intergenic Intergenic -92563 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr1-11876 chr1 42576095 42576305 + 6.60 0.000 intron (NM_001080850, intron 7 of 16) L2c|LINE|L2 43180 NM_001080850 728621 Hs.729640 NM_001080850 ENSG00000186409 CCDC30 PFD6L|PFDN6L coiled-coil domain containing 30 protein-coding chr14-1965 chr14 36046199 36046409 + 6.60 0.000 Intergenic Intergenic -24123 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chr16-2138 chr16 18590537 18590747 + 6.60 0.000 intron (NR_003569, intron 7 of 9) AluSx|SINE|Alu 19394 NR_003569 653190 Hs.13188 NR_003569 ENSG00000256340 ABCC6P1 - ATP binding cassette subfamily C member 6 pseudogene 1 pseudo chr9-8191 chr9 107549234 107549444 + 6.60 0.000 Intergenic Intergenic -59570 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chrX-2950 chrX 154140472 154140682 + 6.60 0.000 Intergenic Intergenic -3666 NM_020061 5956 Hs.247787 NM_020061 ENSG00000102076 OPN1LW CBBM|CBP|COD5|RCP|ROP opsin 1, long wave sensitive protein-coding chr14-5044 chr14 80855076 80855286 + 6.60 0.000 intron (NM_152446, intron 9 of 24) intron (NM_152446, intron 9 of 24) 86557 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr20-4364 chr20 56465283 56465493 + 6.60 0.000 Intergenic AluSg|SINE|Alu -3197 NM_001283036 51507 Hs.517134 NM_016407 ENSG00000022277 RTF2 C20orf43|CDAO5|HSPC164|RTFDC1|SHUJUN-3 replication termination factor 2 protein-coding chr5-7927 chr5 78769324 78769534 + 6.60 0.000 Intergenic AluSx|SINE|Alu -120657 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr16-3985 chr16 89280047 89280257 + 6.60 0.000 exon (NM_013275, exon 9 of 13) exon (NM_013275, exon 9 of 13) -15976 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr20-3724 chr20 17066853 17067063 + 6.60 0.000 Intergenic Intergenic -159149 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr12-5657 chr12 83201600 83201810 + 6.60 0.000 Intergenic Intergenic 514550 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr20-3274 chr20 5008923 5009133 + 6.60 0.000 intron (NM_203327, intron 1 of 16) L2c|LINE|L2 1285 NM_203327 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr2-5997 chr2 74229752 74229962 + 6.60 0.000 intron (NM_133478, intron 25 of 30) intron (NM_133478, intron 25 of 30) 31242 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr16-4278 chr16 25400355 25400565 + 6.60 0.000 Intergenic AluSx1|SINE|Alu -142615 NM_001012981 342357 Hs.513451 NM_001012981 ENSG00000155592 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding chr12-6730 chr12 5648775 5648985 + 6.60 0.000 intron (NM_001278596, intron 15 of 25) (CCTCT)n|Simple_repeat|Simple_repeat 154748 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr4-7432 chr4 67058736 67058946 + 6.60 0.000 Intergenic L2a|LINE|L2 363159 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr7-9306 chr7 127940872 127941082 + 6.60 0.000 intron (NM_014390, intron 15 of 23) intron (NM_014390, intron 15 of 23) -56532 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr8-3593 chr8 139240252 139240462 + 6.60 0.000 Intergenic Intergenic -326316 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr1-14421 chr1 44964894 44965104 + 6.60 0.000 intron (NM_001166588, intron 3 of 9) MamSINE1|SINE|tRNA-RTE 21596 NM_020365 8891 Hs.533549 NM_020365 ENSG00000070785 EIF2B3 EIF-2B|EIF2Bgamma eukaryotic translation initiation factor 2B subunit gamma protein-coding chr10-3690 chr10 104291482 104291692 + 6.60 0.000 intron (NM_001191014, intron 3 of 4) intron (NM_001191014, intron 3 of 4) 16421 NM_001191015 119391 Hs.107384 NM_183239 ENSG00000065621 GSTO2 GSTO 2-2|bA127L20.1 glutathione S-transferase omega 2 protein-coding chr22-3893 chr22 35527275 35527485 + 6.60 0.000 Intergenic Intergenic -13114 NM_001366725 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr14-5348 chr14 102985191 102985401 + 6.60 0.000 intron (NM_006035, intron 6 of 36) intron (NM_006035, intron 6 of 36) 62640 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr3-8598 chr3 161523271 161523481 + 6.60 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 26568 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr20-1734 chr20 44745946 44746156 + 6.60 0.000 exon (NM_022358, exon 1 of 2) exon (NM_022358, exon 1 of 2) 176 NR_132377 106144538 Hs.255479 NR_132377 KCNK15-AS1 - KCNK15 and WISP2 antisense RNA 1 ncRNA chr15-4142 chr15 85762390 85762600 + 6.60 0.000 intron (NM_022480, intron 2 of 2) intron (NM_022480, intron 2 of 2) -3770 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr21-1368 chr21 38572045 38572255 + 6.60 0.000 intron (NR_111949, intron 3 of 4) AluY|SINE|Alu 12795 NM_001243429 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr7-6507 chr7 20540352 20540562 + 6.60 0.000 Intergenic L1PA10|LINE|L1 -75210 NM_001163941 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding chr17-2163 chr17 47733358 47733568 + 6.60 0.000 exon (NM_013351, exon 1 of 6) exon (NM_013351, exon 1 of 6) 227 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr11-4815 chr11 9045266 9045476 + 6.60 0.000 intron (NM_001367977, intron 16 of 22) intron (NM_001367977, intron 16 of 22) -41370 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chrX-2103 chrX 24632703 24632913 + 6.60 0.000 intron (NM_001163264, intron 1 of 7) L1MA4A|LINE|L1 14539 NM_001163265 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr5-4552 chr5 19608768 19608978 + 6.60 0.000 intron (NM_001349559, intron 6 of 12) intron (NM_001349559, intron 6 of 12) 277399 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr10-7229 chr10 121084535 121084745 + 6.60 0.000 Intergenic Intergenic 233278 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr5-6249 chr5 92063347 92063557 + 6.60 0.000 Intergenic HERVL-int|LTR|ERVL -680135 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr19-6238 chr19 6436680 6436890 + 6.60 0.000 Intergenic AluSq|SINE|Alu -3022 NR_135612 284427 Hs.375135 NM_173637 ENSG00000181240 SLC25A41 APC4 solute carrier family 25 member 41 protein-coding chr2-14133 chr2 202618333 202618543 + 6.60 0.000 Intergenic AluYk2|SINE|Alu -16531 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr7-8115 chr7 26554046 26554256 + 6.60 0.000 Intergenic Intergenic -15326 NR_022006 9808 Hs.69749 NM_014769 ENSG00000122548 KIAA0087 - KIAA0087 lncRNA ncRNA chrX-502 chrX 69422179 69422389 + 6.60 0.000 Intergenic SVA_B|Retroposon|SVA -82951 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr7-8318 chr7 41699622 41699832 + 6.60 0.000 intron (NR_027118, intron 1 of 3) intron (NR_027118, intron 1 of 3) 3363 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr3-10191 chr3 119595812 119596022 + 6.60 0.000 Intergenic Intergenic -1931 NM_001206961 51365 Hs.437451 NM_015900 ENSG00000144837 PLA1A PS-PLA1|PSPLA1 phospholipase A1 member A protein-coding chr14-4842 chr14 69541966 69542176 + 6.60 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 32800 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr4-5252 chr4 170176923 170177133 + 6.60 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -49563 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chr18-1927 chr18 34403843 34404053 + 6.60 0.000 Intergenic Intergenic -89342 NM_032975 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr6-8471 chr6 155994234 155994444 + 6.60 0.000 Intergenic Intergenic 47542 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr3-11188 chr3 193124968 193125178 + 6.60 0.000 Intergenic Intergenic -116149 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chrX-1721 chrX 25003953 25004163 + 6.60 0.000 3' UTR (NM_139058, exon 5 of 5) 3' UTR (NM_139058, exon 5 of 5) 11907 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr1-13967 chr1 24896283 24896493 + 6.60 0.000 Intergenic Intergenic 23028 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr19-2718 chr19 32636002 32636212 + 6.60 0.000 intron (NM_032139, intron 12 of 28) intron (NM_032139, intron 12 of 28) -27638 NR_145718 109616972 NR_145718 ENSG00000201388 SNORA68B - small nucleolar RNA, H/ACA box 68B snoRNA chr2-14393 chr2 219728010 219728220 + 6.60 0.000 Intergenic Intergenic 100485 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr10-3536 chr10 74608315 74608525 + 6.60 0.000 intron (NM_001369124, intron 8 of 9) L1PA7|LINE|L1 -79096 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr11-9893 chr11 74617851 74618061 + 6.60 0.000 intron (NM_001363597, intron 5 of 11) AluJb|SINE|Alu 25374 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr1-16050 chr1 201634019 201634229 + 6.60 0.000 Intergenic MIR|SINE|MIR -14198 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr5-8580 chr5 137705243 137705453 + 6.60 0.000 intron (NM_017415, intron 3 of 14) intron (NM_017415, intron 3 of 14) 1079 NM_001257195 26249 Hs.655084 NM_017415 ENSG00000146021 KLHL3 PHA2D kelch like family member 3 protein-coding chr12-7804 chr12 98635995 98636205 + 6.60 0.000 intron (NM_201612, intron 1 of 2) Tigger10|DNA|TcMar-Tigger 8688 NM_201612 121457 Hs.252543 NM_153687 ENSG00000166130 IKBIP IKIP IKBKB interacting protein protein-coding chr7-8710 chr7 74559354 74559564 + 6.60 0.000 intron (NM_016328, intron 21 of 26) intron (NM_016328, intron 21 of 26) -36509 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr19-6077 chr19 3049227 3049437 + 6.60 0.000 intron (NR_031672, intron 2 of 2).3 L2c|LINE|L2 -1697 NM_001144761 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr14-5386 chr14 104038506 104038716 + 6.60 0.000 intron (NM_153046, intron 32 of 35) MLT1G3|LTR|ERVL-MaLR -47089 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr1-15338 chr1 119872880 119873090 + 6.60 0.000 Intergenic Intergenic 23530 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr3-6631 chr3 127293814 127294024 + 6.60 0.000 Intergenic Intergenic -5873 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr8-4200 chr8 84400062 84400272 + 6.60 0.000 intron (NM_001354319, intron 2 of 8) Tigger4b|DNA|TcMar-Tigger -15317 NM_001354308 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr2-12203 chr2 42372881 42373091 + 6.60 0.000 Intergenic Intergenic -4029 NM_001319037 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr5-3944 chr5 1261618 1261828 + 6.60 0.000 intron (NR_149162, intron 8 of 12) intron (NR_149162, intron 8 of 12) 33324 NM_198253 7015 Hs.492203 NM_198253 ENSG00000164362 TERT CMM9|DKCA2|DKCB4|EST2|PFBMFT1|TCS1|TP2|TRT|hEST2|hTRT telomerase reverse transcriptase protein-coding chr13-3219 chr13 25473177 25473387 + 6.60 0.000 intron (NM_016529, intron 2 of 36) intron (NM_016529, intron 2 of 36) 4508 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr2-12995 chr2 106144431 106144641 + 6.60 0.000 intron (NM_025076, intron 6 of 14) intron (NM_025076, intron 6 of 14) -5655 NM_001253876 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr1-13324 chr1 241396197 241396407 + 6.60 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -39072 NM_001282773 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr3-9387 chr3 47733858 47734068 + 6.60 0.000 intron (NM_003074, intron 5 of 27) (TA)n|Simple_repeat|Simple_repeat 47930 NM_003074 6599 Hs.476179 NM_003074 ENSG00000173473 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding chr16-4376 chr16 49451551 49451761 + 6.60 0.000 Intergenic L1ME1|LINE|L1 66929 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr11-8139 chr11 50699986 50700196 + 6.60 0.000 Intergenic L1PA3|LINE|L1 290944 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo chr12-4053 chr12 50486715 50486925 + 6.60 0.000 Intergenic L1MC1|LINE|L1 -18165 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr1-15107 chr1 100585316 100585526 + 6.60 0.000 Intergenic Intergenic 47282 NM_022049 54112 Hs.170053 NM_022049 ENSG00000181656 GPR88 COCPMR|STRG G protein-coupled receptor 88 protein-coding chr7-8556 chr7 57211591 57211801 + 6.60 0.000 Intergenic Intergenic 10478 NR_136269 105375297 Hs.586309 NR_136269 ENSG00000234089 LOC105375297 - uncharacterized LOC105375297 ncRNA chr11-9308 chr11 45734473 45734683 + 6.60 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 12270 NR_047569 100507384 Hs.259426 NR_047569 ENSG00000254519 LOC100507384 - uncharacterized LOC100507384 ncRNA chr17-4747 chr17 41625449 41625659 + 6.60 0.000 promoter-TSS (NM_000422) promoter-TSS (NM_000422) -979 NM_000422 3872 Hs.2785 NM_000422 ENSG00000128422 KRT17 39.1|CK-17|K17|PC|PC2|PCHC1 keratin 17 protein-coding chr4-5964 chr4 168770505 168770715 + 6.60 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -61485 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr6-6358 chr6 58298576 58298786 + 6.60 0.000 Intergenic L2|LINE|L2 -337235 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr10-8001 chr10 61073410 61073620 + 6.60 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 57240 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr11-9810 chr11 70916288 70916498 + 6.60 0.000 intron (NM_012309, intron 9 of 24) intron (NM_012309, intron 9 of 24) -44025 NR_037437 100500844 NR_037437 ENSG00000263744 MIR3664 mir-3664 microRNA 3664 ncRNA chr2-13362 chr2 136222138 136222348 + 6.60 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -104088 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr22-2242 chr22 26192969 26193179 + 6.60 0.000 intron (NM_001184776, intron 1 of 14) intron (NM_001184776, intron 1 of 14) 23600 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr5-4896 chr5 67611456 67611666 + 6.60 0.000 Intergenic Intergenic 35228 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr2-13671 chr2 163255196 163255406 + 6.60 0.000 Intergenic Intergenic -416534 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr8-2095 chr8 133494729 133494939 + 6.60 0.000 intron (NM_003033, intron 3 of 8) L2a|LINE|L2 77053 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr1-12211 chr1 204699121 204699331 + 6.60 0.000 Intergenic Intergenic -13488 NM_006338 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr6-5545 chr6 168988895 168989105 + 6.60 0.000 Intergenic MER57D|LTR|ERV1 -24618 NR_136250 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr11-7608 chr11 45649929 45650139 + 6.60 0.000 exon (NM_003654, exon 4 of 4) exon (NM_003654, exon 4 of 4) 15588 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr2-6657 chr2 9033536 9033746 + 6.60 0.000 Intergenic Intergenic -29957 NM_001321267 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr4-7443 chr4 68130238 68130448 + 6.60 0.000 promoter-TSS (NM_207407) promoter-TSS (NM_207407) -474 NM_207407 389208 Hs.677557 NM_207407 ENSG00000198092 TMPRSS11F - transmembrane serine protease 11F protein-coding chr2-14691 chr2 237579815 237580025 + 6.60 0.000 intron (NM_022449, intron 2 of 5) intron (NM_022449, intron 2 of 5) 10814 NR_033308 64284 Hs.44278 NM_022449 ENSG00000124839 RAB17 - RAB17, member RAS oncogene family protein-coding chr12-3795 chr12 56677231 56677441 + 6.60 0.000 intron (NM_001282601, intron 1 of 6) intron (NM_001282601, intron 1 of 6) 10661 NR_104219 10728 Hs.50425 NM_006601 ENSG00000110958 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 protein-coding chr19-7040 chr19 50823009 50823219 + 6.60 0.000 intron (NM_002257, intron 1 of 4) intron (NM_002257, intron 1 of 4) 673 NM_002257 3816 Hs.123107 NM_002257 ENSG00000167748 KLK1 KLKR|Klk6|hK1 kallikrein 1 protein-coding chr16-4516 chr16 60192563 60192773 + 6.60 0.000 Intergenic Intergenic 167125 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr2-10186 chr2 96449435 96449645 + 6.60 0.000 Intergenic L1MEc|LINE|L1 55817 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr11-5771 chr11 4123372 4123582 + 6.60 0.000 intron (NM_001318064, intron 11 of 17) intron (NM_001318064, intron 11 of 17) 7399 NM_001330193 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr10-5862 chr10 114703629 114703839 + 6.60 0.000 intron (NM_001322886, intron 1 of 20) intron (NM_001322886, intron 1 of 20) -18731 NM_001322882 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr2-5967 chr2 54095508 54095718 + 6.60 0.000 intron (NM_001320587, intron 3 of 5) SVA_D|Retroposon|SVA -20002 NM_001320589 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr16-6152 chr16 23194742 23194952 + 6.60 0.000 intron (NM_001039, intron 5 of 12) MLT1B|LTR|ERVL-MaLR 12102 NM_001039 6340 Hs.371727 NM_001039 ENSG00000166828 SCNN1G BESC3|ENaCg|ENaCgamma|LDLS2|PHA1|SCNEG sodium channel epithelial 1 gamma subunit protein-coding chr2-8404 chr2 115200223 115200433 + 6.60 0.000 intron (NM_001321906, intron 2 of 26) intron (NM_001321906, intron 2 of 26) 38173 NM_001321909 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr1-16168 chr1 206220279 206220489 + 6.60 0.000 intron (NM_015326, intron 1 of 21) intron (NM_015326, intron 1 of 21) 14955 NM_001300952 23380 Hs.497575 NM_015326 ENSG00000266028 SRGAP2 ARHGAP34|FNBP2|SRGAP2A|SRGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding chr2-6859 chr2 73991676 73991886 + 6.60 0.000 intron (NM_001287491, intron 2 of 11) AluSq2|SINE|Alu 6871 NM_001287491 200424 Hs.208546 NM_001287491 ENSG00000187605 TET3 hCG_40738 tet methylcytosine dioxygenase 3 protein-coding chr8-7117 chr8 119739672 119739882 + 6.60 0.000 intron (NM_003184, intron 25 of 25) intron (NM_003184, intron 25 of 25) -66387 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chrX-4861 chrX 104896886 104897096 + 6.60 0.000 intron (NM_017416, intron 2 of 10) LTR12_|LTR|ERV1 323702 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr2-9709 chr2 57570627 57570837 + 6.60 0.000 Intergenic LTR16B2|LTR|ERVL -336919 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr12-5846 chr12 47422777 47422987 + 6.60 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 7874 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr2-12670 chr2 74742434 74742644 + 6.60 0.000 Intergenic Intergenic 88292 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr17-7487 chr17 16147972 16148182 + 6.60 0.000 intron (NM_001190440, intron 8 of 44) AluSp|SINE|Alu 5119 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr5-6338 chr5 134752162 134752372 + 6.60 0.000 TTS (NM_001745) TTS (NM_001745) -6512 NR_125341 9879 Hs.406549 NM_014829 ENSG00000145833 DDX46 PRPF5|Prp5 DEAD-box helicase 46 protein-coding chr20-1949 chr20 30816340 30816550 + 6.60 0.000 Intergenic CpG -412983 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 MLLT10 pseudogene 1 pseudo chr2-4207 chr2 203469610 203469820 + 6.60 0.000 intron (NM_213589, intron 4 of 13) Tigger19b|DNA|TcMar-Tigger 65586 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr16-5081 chr16 82934525 82934735 + 6.60 0.000 intron (NM_001220490, intron 2 of 12) THE1C-int|LTR|ERVL-MaLR 55668 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr14-3326 chr14 88775644 88775854 + 6.60 0.000 intron (NM_183387, intron 1 of 42) L1M1|LINE|L1 17204 NM_183387 161436 Hs.325846 NM_183387 ENSG00000165521 EML5 EMAP-2|EMAP-5 EMAP like 5 protein-coding chr13-3830 chr13 48178220 48178430 + 6.60 0.000 Intergenic Intergenic -54881 NM_021999 9445 Hs.643683 NM_021999 ENSG00000136156 ITM2B ABRI|BRI|BRI2|BRICD2B|E25B|E3-16|FBD|RDGCA|imBRI2 integral membrane protein 2B protein-coding chr8-3894 chr8 38588787 38588997 + 6.60 0.000 Intergenic L3|LINE|CR1 12365 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr13-2654 chr13 80364763 80364973 + 6.60 0.000 Intergenic Intergenic -23742 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr5-8132 chr5 99274150 99274360 + 6.60 0.000 Intergenic MSTB|LTR|ERVL-MaLR -259735 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr1-13705 chr1 14612568 14612778 + 6.60 0.000 intron (NM_201628, intron 1 of 14) MER20|DNA|hAT-Charlie 13956 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr6-6921 chr6 14466619 14466829 + 6.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR -181270 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr6-7964 chr6 112433057 112433267 + 6.60 0.000 Intergenic Intergenic 85832 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr1-9227 chr1 22811558 22811768 + 6.60 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 51563 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr1-16152 chr1 205661843 205662053 + 6.60 0.000 exon (NM_033102, exon 4 of 5) exon (NM_033102, exon 4 of 5) 18561 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chr1-7486 chr1 102853369 102853579 + 6.60 0.000 Intergenic Intergenic 255022 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr3-7117 chr3 183479640 183479850 + 6.60 0.000 Intergenic Kanga1c|DNA|TcMar-Tc2 25931 NR_145763 109617007 NR_145763 ENSG00000199363 SNORA63E - small nucleolar RNA, H/ACA box 63E snoRNA chr11-8816 chr11 11686680 11686890 + 6.60 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -30063 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr21-1372 chr21 40471429 40471639 + 6.60 0.000 intron (NR_073202, intron 3 of 32) MIR|SINE|MIR 88450 NR_038899 100506492 Hs.667053 NR_038896 ENSG00000235123 DSCAM-AS1 M41 DSCAM antisense RNA 1 ncRNA chr4-3359 chr4 7074370 7074580 + 6.60 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -6411 NM_025196 80273 Hs.443723 NM_025196 ENSG00000109519 GRPEL1 GrpE|HMGE|mt-GrpE#1 GrpE like 1, mitochondrial protein-coding chr5-2790 chr5 180352787 180352997 + 6.60 0.000 intron (NM_005110, intron 1 of 18) CpG 444 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr9-6770 chr9 25139370 25139580 + 6.60 0.000 Intergenic L1MA5|LINE|L1 539383 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr3-10091 chr3 109787802 109788012 + 6.60 0.000 Intergenic Intergenic 185079 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr20-3106 chr20 31478426 31478636 + 6.60 0.000 intron (NM_014012, intron 3 of 4) intron (NM_014012, intron 3 of 4) 3243 NM_014012 28954 Hs.247729 NM_014012 ENSG00000088320 REM1 GD:REM|GES RRAD and GEM like GTPase 1 protein-coding chr11-6850 chr11 98053528 98053738 + 6.60 0.000 Intergenic Intergenic -967316 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr15-4759 chr15 69637899 69638109 + 6.60 0.000 intron (NR_126437, intron 3 of 5) L2a|LINE|L2 45804 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr1-15196 chr1 109997715 109997925 + 6.60 0.000 intron (NM_001242673, intron 1 of 16) intron (NM_001242673, intron 1 of 16) -3107 NM_001242674 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr1-13888 chr1 21744655 21744865 + 6.60 0.000 intron (NM_001350167, intron 8 of 26) AluSx1|SINE|Alu 38389 NM_001350168 84196 Hs.467524 NM_032236 ENSG00000090686 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding chr20-3138 chr20 36386357 36386567 + 6.60 0.000 intron (NM_001365621, intron 2 of 12) GA-rich|Low_complexity|Low_complexity -75006 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr3-6975 chr3 167150834 167151044 + 6.60 0.000 Intergenic Intergenic 229344 NM_001199202 79740 Hs.478143 NM_024687 ENSG00000169064 ZBBX - zinc finger B-box domain containing protein-coding chr12-7547 chr12 71141453 71141663 + 6.60 0.000 intron (NM_001369760, intron 2 of 7) intron (NM_001369760, intron 2 of 7) 16251 NM_001369760 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr9-6412 chr9 38539810 38540020 + 6.60 0.000 TTS (NR_047651) TTS (NR_047651) 5457 NR_047651 100289137 Hs.644630 NR_047651 ENSG00000283486 FAM95C - family with sequence similarity 95 member C ncRNA chr1-8209 chr1 24632148 24632358 + 6.60 0.000 Intergenic Intergenic -11049 NM_001366588 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding chr5-8914 chr5 157271820 157272030 + 6.60 0.000 intron (NM_014376, intron 1 of 30) intron (NM_014376, intron 1 of 30) 2601 NM_014376 26999 Hs.519702 NM_014376 ENSG00000055163 CYFIP2 EIEE65|PIR121 cytoplasmic FMR1 interacting protein 2 protein-coding chr12-6706 chr12 4814378 4814588 + 6.60 0.000 3' UTR (NM_002235, exon 1 of 2) 3' UTR (NM_002235, exon 1 of 2) 5307 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding chr11-7104 chr11 123165196 123165406 + 6.60 0.000 intron (NM_024769, intron 1 of 6) MIRc|SINE|MIR 29947 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr6-4893 chr6 91473120 91473330 + 6.60 0.000 Intergenic MER8|DNA|TcMar-Tigger -48435 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr11-10759 chr11 134247903 134248113 + 6.60 0.000 TTS (NM_052875) TTS (NM_052875) 5344 NM_001037304 29087 Hs.13645 NM_014174 ENSG00000151500 THYN1 HSPC144|MDS012|MY105|THY28|THY28KD thymocyte nuclear protein 1 protein-coding chr2-11809 chr2 16956982 16957192 + 6.60 0.000 Intergenic AluSx1|SINE|Alu -291253 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr7-6093 chr7 117678680 117678890 + 6.60 0.000 Intergenic L2a|LINE|L2 -114109 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr5-6518 chr5 4658164 4658374 + 6.60 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -115212 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA chr7-2570 chr7 116526122 116526332 + 6.60 0.000 promoter-TSS (NM_001172896) promoter-TSS (NM_001172896) -135 NM_001172896 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr16-7080 chr16 89022740 89022950 + 6.60 0.000 Intergenic Intergenic -45638 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr6-7988 chr6 115376482 115376692 + 6.60 0.000 Intergenic L1MC5a|LINE|L1 267248 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr6-3799 chr6 26025579 26025789 + 6.60 0.000 Intergenic L1ME4b|LINE|L1 1568 NM_003544 8366 Hs.143080 NM_003544 ENSG00000278705 HIST1H4B H4/I|H4FI histone cluster 1 H4 family member b protein-coding chr7-8561 chr7 57428747 57428957 + 6.60 0.000 Intergenic Intergenic -21325 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr17-3846 chr17 44122126 44122336 + 6.60 0.000 intron (NM_001015053, intron 1 of 26) intron (NM_001015053, intron 1 of 26) 1410 NM_001015053 10014 Hs.438782 NM_005474 ENSG00000108840 HDAC5 HD5|NY-CO-9 histone deacetylase 5 protein-coding chr18-3013 chr18 25633928 25634138 + 6.60 0.000 Intergenic Intergenic -281867 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr3-7185 chr3 188865799 188866009 + 6.60 0.000 intron (NM_001167672, intron 7 of 9) MIRc|SINE|MIR 81735 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr12-4905 chr12 66760760 66760970 + 6.60 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) 43404 NM_001366723 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr10-7528 chr10 14448386 14448596 + 6.60 0.000 Intergenic Intergenic 11915 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA chr18-3117 chr18 37123380 37123590 + 6.60 0.000 intron (NR_136303, intron 8 of 13) L3|LINE|CR1 -150975 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr12-7724 chr12 91691085 91691295 + 6.60 0.000 Intergenic Intergenic 450523 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr12-6447 chr12 91065125 91065335 + 6.60 0.000 Intergenic ERVL-B4-int|LTR|ERVL -6876 NM_007035 11081 Hs.125750 NM_007035 ENSG00000139330 KERA CNA2|KTN|SLRR2B keratocan protein-coding chr2-10771 chr2 42054532 42054742 + 6.60 0.000 intron (NM_138370, intron 3 of 6) intron (NM_138370, intron 3 of 6) 6616 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr2-4950 chr2 176653801 176654011 + 6.60 0.000 intron (NR_110599, intron 2 of 3) intron (NR_110599, intron 2 of 3) 16152 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr1-7493 chr1 110850774 110850984 + 6.60 0.000 Intergenic Intergenic -20320 NM_001040033 963 Hs.443057 NM_000560 ENSG00000143119 CD53 MOX44|TSPAN25 CD53 molecule protein-coding chr10-7393 chr10 3426338 3426548 + 6.60 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 76395 NR_155745 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr22-4264 chr22 48582006 48582216 + 6.60 0.000 intron (NM_015381, intron 1 of 3) intron (NM_015381, intron 1 of 3) 5771 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr1-10197 chr1 112606403 112606613 + 6.60 0.000 intron (NM_017744, intron 3 of 14) MLT1B-int|LTR|ERVL-MaLR 12633 NM_138727 54879 Hs.201921 NM_017744 ENSG00000007341 ST7L FAM4B|ST7R|STLR suppression of tumorigenicity 7 like protein-coding chr1-9065 chr1 15225729 15225939 + 6.60 0.000 Intergenic Intergenic -21391 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr8-6106 chr8 27597216 27597426 + 6.60 0.000 non-coding (NR_045494, exon 9 of 9) non-coding (NR_045494, exon 9 of 9) 13430 NR_106902 102465508 NR_106902 ENSG00000284280 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA chr17-4298 chr17 78103879 78104089 + 6.60 0.000 intron (NM_018996, intron 20 of 20) MLT1B|LTR|ERVL-MaLR 7815 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr4-7914 chr4 107255194 107255404 + 6.60 0.000 Intergenic L2a|LINE|L2 -218986 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr21-1267 chr21 20777307 20777517 + 6.60 0.000 intron (NR_109786, intron 6 of 7) MER61-int|LTR|ERV1 25696 NR_109786 387486 Hs.576551 NR_024090 ENSG00000224924 LINC00320 C21orf131|NCRNA00320|PRED14 long intergenic non-protein coding RNA 320 ncRNA chr2-4840 chr2 73828912 73829122 + 6.60 0.000 promoter-TSS (NR_148668) promoter-TSS (NR_148668) 50 NM_001353974 10617 Hs.469018 NM_006463 ENSG00000124356 STAMBP AMSH|MICCAP STAM binding protein protein-coding chr5-9068 chr5 171121600 171121810 + 6.60 0.000 intron (NM_022897, intron 14 of 27) L1M2c|LINE|L1 -187543 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chrX-2010 chrX 15041976 15042186 + 6.60 0.000 Intergenic Intergenic 156790 NM_001177475 158747 Hs.744919 NM_152581 ENSG00000130150 MOSPD2 - motile sperm domain containing 2 protein-coding chr1-14627 chr1 56377213 56377423 + 6.60 0.000 Intergenic Intergenic -37645 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr5-3816 chr5 95939073 95939283 + 6.60 0.000 intron (NM_012081, intron 2 of 11) intron (NM_012081, intron 2 of 11) 22673 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr2-9034 chr2 198293097 198293307 + 6.60 0.000 Intergenic LTR16D|LTR|ERVL 81895 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr19-6496 chr19 17962118 17962328 + 6.60 0.000 intron (NM_002248, intron 2 of 10) intron (NM_002248, intron 2 of 10) 10921 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr12-6342 chr12 56783811 56784021 + 6.60 0.000 intron (NM_003725, intron 3 of 4) SVA_D|Retroposon|SVA 20592 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr6-5531 chr6 167492789 167492999 + 6.60 0.000 Intergenic Intergenic -20104 NR_134591 105378127 Hs.58456 NR_134591 LOC105378127 - uncharacterized LOC105378127 ncRNA chr10-4214 chr10 119285877 119286087 + 6.60 0.000 intron (NM_005308, intron 1 of 15) MIRc|SINE|MIR 78411 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr20-3327 chr20 21789458 21789668 + 6.60 0.000 Intergenic Intergenic 83899 NM_006192 5075 Hs.122310 NM_006192 ENSG00000125813 PAX1 HUP48|OFC2 paired box 1 protein-coding chr20-3186 chr20 46465352 46465562 + 6.60 0.000 promoter-TSS (NR_026640) promoter-TSS (NR_026640) -165 NR_026640 7686 Hs.717103 NR_026640 ENSG00000225849 MKRN7P MKRNP3|ZNF127L5|dJ981L23.2 makorin ring finger protein 7, pseudogene pseudo chr4-6945 chr4 17941288 17941498 + 6.60 0.000 intron (NR_158563, intron 4 of 5) AluY|SINE|Alu 80362 NR_136669 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr11-6668 chr11 76249537 76249747 + 6.60 0.000 Intergenic Intergenic -43140 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr4-7702 chr4 88867031 88867241 + 6.60 0.000 intron (NM_014883, intron 6 of 23) Tigger17a|DNA|TcMar-Tigger -43775 NM_001265579 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr17-8230 chr17 65054903 65055113 + 6.60 0.000 intron (NM_006572, intron 1 of 3) intron (NM_006572, intron 1 of 3) 766 NM_001282425 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr5-4867 chr5 65356424 65356634 + 6.60 0.000 intron (NR_135689, intron 7 of 25) intron (NR_135689, intron 7 of 25) 125391 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr14-3488 chr14 102496549 102496759 + 6.60 0.000 intron (NM_014844, intron 17 of 19) intron (NM_014844, intron 17 of 19) 13122 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr8-5074 chr8 38683106 38683316 + 6.60 0.000 Intergenic Intergenic -44975 NR_148048 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr2-4652 chr2 189268448 189268658 + 6.60 0.000 Intergenic Intergenic -88792 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr8-4435 chr8 111264828 111265038 + 6.60 0.000 Intergenic Intergenic -28730 NR_125418 101927487 Hs.630004 NR_125418 ENSG00000253103 LINC01609 - long intergenic non-protein coding RNA 1609 ncRNA chr21-1066 chr21 31066840 31067050 + 6.60 0.000 Intergenic ERVL-E-int|LTR|ERVL -28469 NM_001099219 728299 Hs.580875 NM_001099219 ENSG00000206102 KRTAP19-8 - keratin associated protein 19-8 protein-coding chr2-5310 chr2 73175653 73175863 + 6.60 0.000 Intergenic CpG -26816 NM_001134462 344022 Hs.694384 NM_001134462 ENSG00000214513 NOTO - notochord homeobox protein-coding chr13-2271 chr13 27928810 27929020 + 6.60 0.000 Intergenic Intergenic 8915 NM_000209 3651 Hs.32938 NM_000209 ENSG00000139515 PDX1 GSF|IDX-1|IPF1|IUF1|MODY4|PAGEN1|PDX-1|STF-1 pancreatic and duodenal homeobox 1 protein-coding chr11-9262 chr11 43982835 43983045 + 6.60 0.000 Intergenic Intergenic 40303 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding chr1-12970 chr1 154759708 154759918 + 6.60 0.000 intron (NM_001204087, intron 3 of 8) intron (NM_001204087, intron 3 of 8) 100063 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr2-9866 chr2 191286293 191286503 + 6.60 0.000 intron (NM_012223, intron 2 of 28) intron (NM_012223, intron 2 of 28) 40994 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr6-4011 chr6 120202085 120202295 + 6.60 0.000 Intergenic L1MA10|LINE|L1 187011 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr8-1953 chr8 58067667 58067877 + 6.60 0.000 intron (NM_147189, intron 3 of 4) L2a|LINE|L2 73249 NM_147189 90362 Hs.154652 NM_147189 ENSG00000169122 FAM110B C8orf72 family with sequence similarity 110 member B protein-coding chr6-3739 chr6 6975599 6975809 + 6.60 0.000 Intergenic Intergenic -132039 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr14-4429 chr14 32366706 32366916 + 6.60 0.000 intron (NM_004274, intron 1 of 13) intron (NM_004274, intron 1 of 13) 37513 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr17-7045 chr17 61662641 61662851 + 6.60 0.000 Intergenic Intergenic -71527 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr5-6600 chr5 34026457 34026667 + 6.60 0.000 intron (NR_037951, intron 4 of 8) L1M7|LINE|L1 16651 NM_030945 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr2-11862 chr2 22061606 22061816 + 6.60 0.000 Intergenic L1MC3|LINE|L1 -351059 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr2-10815 chr2 50728054 50728264 + 6.60 0.000 intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) -31897 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA chr17-2352 chr17 64662199 64662409 + 6.60 0.000 promoter-TSS (NM_022739) promoter-TSS (NM_022739) 3 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr14-4486 chr14 36396273 36396483 + 6.60 0.000 Intergenic Intergenic -75702 NM_001144891 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr2-7779 chr2 41176057 41176267 + 6.60 0.000 Intergenic Intergenic -663727 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr10-3962 chr10 109981899 109982109 + 6.60 0.000 intron (NR_038943, intron 2 of 4) MIRc|SINE|MIR -14369 NM_001320591 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr10-2390 chr10 112203372 112203582 + 6.60 0.000 Intergenic Intergenic -19712 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr7-8673 chr7 72397647 72397857 + 6.60 0.000 intron (NM_001363460, intron 1 of 5) intron (NM_001363460, intron 1 of 5) 14586 NM_031468 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr3-6791 chr3 143795873 143796083 + 6.60 0.000 intron (NM_173653, intron 3 of 15) intron (NM_173653, intron 3 of 15) 52490 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr8-4642 chr8 134390154 134390364 + 6.60 0.000 Intergenic L1M2c|LINE|L1 -207812 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr2-10925 chr2 74233477 74233687 + 6.60 0.000 intron (NM_133478, intron 22 of 30) intron (NM_133478, intron 22 of 30) 34967 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr15-5114 chr15 89471656 89471866 + 6.60 0.000 non-coding (NR_110261, exon 11 of 11) non-coding (NR_110261, exon 11 of 11) 24822 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr2-14545 chr2 230548265 230548475 + 6.60 0.000 Intergenic AluSx1|SINE|Alu 131614 NM_001206704 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr1-14451 chr1 46556894 46557104 + 6.60 0.000 TTS (NM_003684) TTS (NM_003684) -5342 NM_001322255 148930 Hs.350764 NM_182516 ENSG00000162456 KNCN Kino|L5 kinocilin protein-coding chr1-9481 chr1 36589807 36590017 + 6.60 0.000 Intergenic Intergenic -106598 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr6-7082 chr6 33925178 33925388 + 6.60 0.000 Intergenic MER63A|DNA|hAT-Blackjack 26148 NR_106982 102466816 NR_106982 ENSG00000276824 MIR7159 hsa-mir-7159 microRNA 7159 ncRNA chr11-10056 chr11 84245235 84245445 + 6.60 0.000 intron (NM_001142700, intron 1 of 19) intron (NM_001142700, intron 1 of 19) 27940 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr11-5257 chr11 31301418 31301628 + 6.60 0.000 intron (NM_181807, intron 6 of 8) intron (NM_181807, intron 6 of 8) 68216 NM_001367979 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr8-6914 chr8 102445594 102445804 + 6.60 0.000 Intergenic MER63C|DNA|hAT-Blackjack -32999 NM_015902 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr20-3988 chr20 35581935 35582145 + 6.60 0.000 non-coding (NR_119376, exon 28 of 43) non-coding (NR_119376, exon 28 of 43) 25522 NR_119376 80307 Hs.72222 NR_001442 ENSG00000088340 FER1L4 C20orf124 fer-1 like family member 4 (pseudogene) pseudo chr1-14785 chr1 70524478 70524688 + 6.60 0.000 Intergenic Intergenic 113315 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr12-4168 chr12 88554443 88554653 + 6.60 0.000 intron (NM_000899, intron 1 of 9) intron (NM_000899, intron 1 of 9) 25923 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr6-2891 chr6 11616296 11616506 + 6.60 0.000 Intergenic Intergenic 78652 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr5-6352 chr5 137312444 137312654 + 6.60 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 184352 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr8-5412 chr8 29061368 29061578 + 6.60 0.000 Intergenic Intergenic 170159 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr2-9498 chr2 236573261 236573471 + 6.60 0.000 intron (NM_020311, intron 1 of 1) intron (NM_020311, intron 1 of 1) 3541 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr20-2830 chr20 59830974 59831184 + 6.60 0.000 intron (NM_080672, intron 8 of 12) intron (NM_080672, intron 8 of 12) 102558 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding chr21-1602 chr21 16708648 16708858 + 6.60 0.000 Intergenic Intergenic 118516 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr16-6185 chr16 26155442 26155652 + 6.60 0.000 Intergenic Intergenic 130310 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr12-4704 chr12 49594633 49594843 + 6.60 0.000 intron (NR_027450, intron 5 of 6) AluSx|SINE|Alu 10901 NR_027450 84070 Hs.524406 NM_032130 ENSG00000135436 FAM186B C12orf25 family with sequence similarity 186 member B protein-coding chr5-4981 chr5 80301462 80301672 + 6.60 0.000 Intergenic SVA_D|Retroposon|SVA -1089 NR_004845 644936 Hs.627173 NR_004845 LOC644936 - actin beta pseudogene pseudo chr11-8368 chr11 83518512 83518722 + 6.60 0.000 intron (NM_001142699, intron 21 of 27) L1PA4|LINE|L1 163808 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-8669 chr9 130297499 130297709 + 6.60 0.000 intron (NM_001291815, intron 7 of 97) intron (NM_001291815, intron 7 of 97) 31844 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr2-6870 chr2 76062872 76063082 + 6.60 0.000 Intergenic Intergenic -352062 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr13-3934 chr13 59495393 59495603 + 6.60 0.000 Intergenic Intergenic -517220 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr11-10452 chr11 117366121 117366331 + 6.60 0.000 intron (NM_001271933, intron 7 of 31) intron (NM_001271933, intron 7 of 31) 38372 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr8-3145 chr8 71501950 71502160 + 6.60 0.000 intron (NM_001370334, intron 2 of 19) MIRb|SINE|MIR 45649 NM_172059 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr3-8026 chr3 193142431 193142641 + 6.60 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -98686 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr3-10612 chr3 145293698 145293908 + 6.60 0.000 Intergenic Intergenic 775382 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr17-5262 chr17 18973344 18973554 + 6.60 0.000 intron (NM_001039999, intron 5 of 5) intron (NM_001039999, intron 5 of 5) 21284 NM_152351 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr15-4139 chr15 85159537 85159747 + 6.60 0.000 Intergenic AluJr|SINE|Alu 75139 NR_158179 101929479 Hs.681665 NR_158179 LOC101929479 - golgin A2 pseudogene pseudo chr12-2851 chr12 2885522 2885732 + 6.60 0.000 intron (NM_001252499, intron 2 of 2) AluY|SINE|Alu -5264 NM_003324 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 TUB like protein 3 protein-coding chr14-4118 chr14 69848611 69848821 + 6.60 0.000 Intergenic Intergenic -30700 NM_022137 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding chr6-7582 chr6 73994894 73995104 + 6.60 0.000 Intergenic Intergenic -74452 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr3-4983 chr3 15815732 15815942 + 6.60 0.000 intron (NM_001349279, intron 1 of 28) intron (NM_001349279, intron 1 of 28) -17653 NM_001349280 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr4-4231 chr4 16664856 16665066 + 6.60 0.000 intron (NM_001304435, intron 2 of 7) intron (NM_001304435, intron 2 of 7) 233684 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr13-1730 chr13 99956285 99956495 + 6.60 0.000 intron (NR_120421, intron 1 of 4) CpG 775 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr17-8038 chr17 50383324 50383534 + 6.60 0.000 intron (NM_018509, intron 6 of 6) intron (NM_018509, intron 6 of 6) 10200 NM_152463 146956 Hs.514330 NM_152463 ENSG00000154920 EME1 MMS4L|SLX2A essential meiotic structure-specific endonuclease 1 protein-coding chr22-1786 chr22 29655852 29656062 + 6.60 0.000 intron (NR_156186, intron 7 of 16) AluJb|SINE|Alu 52324 NM_181831 4771 Hs.187898 NM_000268 ENSG00000186575 NF2 ACN|BANF|SCH neurofibromin 2 protein-coding chr17-5641 chr17 49862650 49862860 + 6.60 0.000 Intergenic Intergenic -14738 NM_001077506 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr11-5123 chr11 127232643 127232853 + 6.60 0.000 Intergenic Intergenic -38322 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr7-2105 chr7 6671356 6671566 + 6.60 0.000 Intergenic SVA_D|Retroposon|SVA 34143 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding chr8-3446 chr8 87832563 87832773 + 6.60 0.000 Intergenic MER67D|LTR|ERV1 41347 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr8-6427 chr8 59199524 59199734 + 6.60 0.000 Intergenic L1MC3|LINE|L1 80419 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr2-10104 chr2 55697001 55697211 + 6.60 0.000 Intergenic Charlie29a|DNA|hAT-Charlie -3262 NM_033109 87178 Hs.388733 NM_033109 ENSG00000138035 PNPT1 COXPD13|DFNB70|OLD35|PNPASE|old-35 polyribonucleotide nucleotidyltransferase 1 protein-coding chr19-4457 chr19 4957438 4957648 + 6.60 0.000 intron (NM_001290051, intron 16 of 16) AluY|SINE|Alu -11570 NM_001370093 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr1-8512 chr1 154578030 154578240 + 6.60 0.000 3' UTR (NM_000748, exon 6 of 6) 3' UTR (NM_000748, exon 6 of 6) 10357 NM_000748 1141 Hs.2306 NM_000748 ENSG00000160716 CHRNB2 EFNL3|nAChRB2 cholinergic receptor nicotinic beta 2 subunit protein-coding chr8-4418 chr8 107607042 107607252 + 6.60 0.000 Intergenic L1M5|LINE|L1 -109229 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr7-6626 chr7 112423035 112423245 + 6.60 0.000 promoter-TSS (NM_001197080) promoter-TSS (NM_001197080) -4 NM_001197080 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr13-4354 chr13 103662701 103662911 + 6.60 0.000 Intergenic Intergenic 237606 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr11-8754 chr11 9019310 9019520 + 6.60 0.000 TTS (NM_001330199) TTS (NM_001330199) -15414 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chr5-5274 chr5 122471751 122471961 + 6.60 0.000 intron (NR_051996, intron 2 of 5) intron (NR_051996, intron 2 of 5) 7231 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA chr20-4172 chr20 44768767 44768977 + 6.60 0.000 intron (NM_182970, intron 2 of 5) intron (NM_182970, intron 2 of 5) -22645 NR_132377 106144538 Hs.255479 NR_132377 KCNK15-AS1 - KCNK15 and WISP2 antisense RNA 1 ncRNA chr1-14148 chr1 32211032 32211242 + 6.60 0.000 intron (NM_001099434, intron 1 of 8) intron (NM_001099434, intron 1 of 8) 2043 NM_001099434 149069 Hs.424588 NM_001099434 ENSG00000222046 DCDC2B - doublecortin domain containing 2B protein-coding chr6-7024 chr6 23811921 23812131 + 6.60 0.000 Intergenic L1MEc|LINE|L1 -314189 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr7-5978 chr7 101648425 101648635 + 6.60 0.000 Intergenic Intergenic -19234 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr22-4111 chr22 43744498 43744708 + 6.60 0.000 intron (NM_198856, intron 4 of 29) LTR78B|LTR|ERV1 67702 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr8-3375 chr8 54520268 54520478 + 6.60 0.000 Intergenic MER54A|LTR|ERVL 62438 NM_022454 64321 Hs.98367 NM_022454 ENSG00000164736 SOX17 VUR3 SRY-box transcription factor 17 protein-coding chr16-2689 chr16 80422456 80422666 + 6.60 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -118173 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr2-8150 chr2 84082077 84082287 + 6.60 0.000 Intergenic L2a|LINE|L2 -208500 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr22-2117 chr22 31127341 31127551 + 6.60 0.000 exon (NM_001284289, exon 8 of 15) exon (NM_001284289, exon 8 of 15) 4480 NM_001284285 27124 Hs.517549 NM_014422 ENSG00000185133 INPP5J INPP5|PIB5PA|PIPP inositol polyphosphate-5-phosphatase J protein-coding chr18-3041 chr18 27963279 27963489 + 6.60 0.000 exon (NM_001792, exon 15 of 16) exon (NM_001792, exon 15 of 16) 73257 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr3-7663 chr3 37231093 37231303 + 6.60 0.000 Intergenic AluSg|SINE|Alu -12073 NM_002078 2803 Hs.344151 NM_002078 ENSG00000144674 GOLGA4 CRPF46|GCP2|GOLG|MU-RMS-40.18|p230 golgin A4 protein-coding chr4-7820 chr4 99519122 99519332 + 6.60 0.000 intron (NM_032149, intron 2 of 8) LTR16|LTR|ERVL 8206 NM_032149 84103 Hs.97501 NM_032149 ENSG00000138813 C4orf17 - chromosome 4 open reading frame 17 protein-coding chr9-7774 chr9 77799807 77800017 + 6.60 0.000 intron (NM_002072, intron 3 of 6) intron (NM_002072, intron 3 of 6) -151590 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr1-16698 chr1 246223130 246223340 + 6.60 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 194177 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr6-6207 chr6 15630645 15630855 + 6.60 0.000 intron (NR_036448, intron 5 of 9) AluSc|SINE|Alu 32278 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr1-12768 chr1 74621332 74621542 + 6.60 0.000 non-coding (NR_121671, exon 3 of 3) non-coding (NR_121671, exon 3 of 3) 31702 NR_121670 101927320 Hs.662589 NR_121670 ENSG00000234497 ERICH3-AS1 - ERICH3 antisense RNA 1 ncRNA chr7-7217 chr7 21892579 21892789 + 6.60 0.000 intron (NM_001277115, intron 77 of 81) intron (NM_001277115, intron 77 of 81) 53215 NM_018719 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr2-9438 chr2 233604777 233604987 + 6.60 0.000 Intergenic MSTB|LTR|ERVL-MaLR -12763 NM_019076 54576 Hs.554822 NM_019076 ENSG00000242366 UGT1A8 GNT1|UDPGT|UDPGT 1-8|UGT-1A|UGT-1H|UGT1|UGT1-01|UGT1-08|UGT1.1|UGT1.8|UGT1A|UGT1A1|UGT1A8S|UGT1H|hUG-BR1 UDP glucuronosyltransferase family 1 member A8 protein-coding chr2-12951 chr2 102613084 102613294 + 6.60 0.000 Intergenic MIR|SINE|MIR -6364 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr6-7658 chr6 83766814 83767024 + 6.60 0.000 Intergenic Intergenic 57477 NR_136251 105377879 Hs.736886 NR_136251 LOC105377879 - uncharacterized LOC105377879 ncRNA chr15-5261 chr15 98822147 98822357 + 6.60 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 37826 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr5-5780 chr5 174098649 174098859 + 6.60 0.000 intron (NM_015980, intron 3 of 4) intron (NM_015980, intron 3 of 4) 53048 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr10-5143 chr10 52004395 52004605 + 6.60 0.000 intron (NM_001098512, intron 5 of 17) intron (NM_001098512, intron 5 of 17) -304905 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chrX-2883 chrX 148496804 148497014 + 6.60 0.000 Intergenic Intergenic -3708 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr14-2606 chr14 56377248 56377458 + 6.60 0.000 Intergenic L1ME4c|LINE|L1 -136978 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr3-5350 chr3 137083147 137083357 + 6.60 0.000 Intergenic Intergenic 125269 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr11-9197 chr11 37170300 37170510 + 6.60 0.000 Intergenic Intergenic -572126 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chrX-2129 chrX 31056568 31056778 + 6.60 0.000 Intergenic AluSz|SINE|Alu 15368 NM_031894 53940 Hs.333125 NM_031894 ENSG00000132446 FTHL17 CT38 ferritin heavy chain like 17 protein-coding chr21-1908 chr21 44757141 44757351 + 6.60 0.000 Intergenic Intergenic 44574 NM_001202489 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding chr8-4545 chr8 124440388 124440598 + 6.60 0.000 Intergenic Intergenic -10327 NM_017956 55039 Hs.9925 NM_017956 ENSG00000183665 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog protein-coding chr1-8981 chr1 10165582 10165792 + 6.60 0.000 intron (NM_006048, intron 22 of 26) L2a|LINE|L2 -44883 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr11-6115 chr11 37302052 37302262 + 6.60 0.000 Intergenic LTR38|LTR|ERV1 -636444 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr3-9961 chr3 95218449 95218659 + 6.60 0.000 Intergenic Intergenic 280291 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr12-4279 chr12 121831827 121832037 + 6.60 0.000 3' UTR (NM_001353345, exon 16 of 16) 3' UTR (NM_001353345, exon 16 of 16) 26927 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr7-6589 chr7 83541744 83541954 + 6.60 0.000 intron (NM_012431, intron 1 of 16) intron (NM_012431, intron 1 of 16) 99582 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr12-4209 chr12 103575475 103575685 + 6.60 0.000 Intergenic Intergenic -11693 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chr20-3817 chr20 23734886 23735096 + 6.60 0.000 Intergenic L1PB4|LINE|L1 15946 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr2-11715 chr2 10244789 10244999 + 6.60 0.000 Intergenic L2b|LINE|L2 -52223 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr2-14656 chr2 235888217 235888427 + 6.60 0.000 intron (NM_001037131, intron 10 of 17) intron (NM_001037131, intron 10 of 17) 280064 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr13-2690 chr13 89888963 89889173 + 6.60 0.000 Intergenic LTR16A1|LTR|ERVL 230649 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr12-6713 chr12 5034992 5035202 + 6.60 0.000 Intergenic Intergenic -8782 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr7-6157 chr7 126677637 126677847 + 6.60 0.000 intron (NM_001371085, intron 7 of 10) L1PB3|LINE|L1 380442 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr6-6279 chr6 36407489 36407699 + 6.60 0.000 intron (NM_152990, intron 3 of 4) FLAM_C|SINE|Alu -19794 NM_001207037 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr20-2957 chr20 32790066 32790276 + 6.60 0.000 intron (NM_175848, intron 7 of 21) intron (NM_175848, intron 7 of 21) 10319 NM_175850 1789 Hs.643024 NM_006892 ENSG00000088305 DNMT3B ICF|ICF1|M.HsaIIIB DNA methyltransferase 3 beta protein-coding chr16-6368 chr16 51638998 51639208 + 6.60 0.000 Intergenic Intergenic -123416 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr6-7974 chr6 114041132 114041342 + 6.60 0.000 intron (NR_125845, intron 4 of 9) intron (NR_125845, intron 4 of 9) 21640 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr3-4923 chr3 195466087 195466297 + 6.60 0.000 Intergenic AluY|SINE|Alu -23172 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr16-6663 chr16 69498419 69498629 + 6.60 0.000 Intergenic Intergenic 67344 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr10-5734 chr10 101659596 101659806 + 6.60 0.000 intron (NR_136613, intron 4 of 7) intron (NR_136613, intron 4 of 7) 35469 NM_022039 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr1-14246 chr1 36627228 36627438 + 6.60 0.000 Intergenic (GAGGT)n|Simple_repeat|Simple_repeat -144019 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr1-7171 chr1 208136535 208136745 + 6.60 0.000 intron (NM_025179, intron 4 of 31) intron (NM_025179, intron 4 of 31) 107744 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr4-8211 chr4 135566860 135567070 + 6.60 0.000 Intergenic Intergenic 321128 NR_103762 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr12-7334 chr12 55338045 55338255 + 6.60 0.000 Intergenic Tigger2|DNA|TcMar-Tigger 6449 NM_054104 254786 Hs.553653 NM_054104 ENSG00000205329 OR6C3 OST709 olfactory receptor family 6 subfamily C member 3 protein-coding chr18-1119 chr18 79368040 79368250 + 6.60 0.000 intron (NR_148360, intron 27 of 31) L1MC4a|LINE|L1 -27785 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr6-7941 chr6 111076028 111076238 + 6.60 0.000 Intergenic Intergenic -11370 NM_018593 117247 Hs.591327 NM_018593 ENSG00000112394 SLC16A10 MCT10|PRO0813|TAT1 solute carrier family 16 member 10 protein-coding chr22-1623 chr22 31303398 31303608 + 6.60 0.000 Intergenic AluY|SINE|Alu -10969 NM_001135911 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr11-5701 chr11 1243610 1243820 + 6.60 0.000 exon (NM_002458, exon 31 of 49) exon (NM_002458, exon 31 of 49) 5961 NR_157183 112577518 NR_157183 MUC5B-AS1 - MUC5B antisense RNA 1 ncRNA chr3-4913 chr3 190735032 190735242 + 6.60 0.000 Intergenic Intergenic 127557 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr6-4142 chr6 167651552 167651762 + 6.60 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 27566 NR_117091 401286 Hs.487182 NR_117091 ENSG00000272549 LINC02538 - long intergenic non-protein coding RNA 2538 ncRNA chr4-2732 chr4 6615525 6615735 + 6.60 0.000 intron (NM_001292038, intron 16 of 18) AluJr|SINE|Alu -24461 NM_001272053 93621 Hs.406590 NM_033296 ENSG00000179010 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding chr9-8250 chr9 111105241 111105451 + 6.60 0.000 Intergenic Intergenic -66348 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr1-12741 chr1 63252701 63252911 + 6.60 0.000 intron (NR_038252, intron 4 of 11) intron (NR_038252, intron 4 of 11) 64451 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr21-1838 chr21 41499181 41499391 + 6.60 0.000 intron (NM_005656, intron 1 of 13) intron (NM_005656, intron 1 of 13) 8779 NM_001135099 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr15-4613 chr15 61341283 61341493 + 6.60 0.000 Intergenic Intergenic -112086 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr19-5489 chr19 42693820 42694030 + 6.60 0.000 Intergenic Intergenic 46556 NM_021016 5671 Hs.654413 NM_021016 ENSG00000221826 PSG3 - pregnancy specific beta-1-glycoprotein 3 protein-coding chr5-7094 chr5 178166244 178166454 + 6.60 0.000 Intergenic Intergenic -12389 NM_001034833 55651 Hs.744074 NM_017838 ENSG00000145912 NHP2 DKCB2|NHP2P|NOLA2 NHP2 ribonucleoprotein protein-coding chr1-5999 chr1 48109436 48109646 + 6.60 0.000 intron (NR_026749, intron 9 of 9) intron (NR_026749, intron 9 of 9) 72887 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo chr7-9365 chr7 130044843 130045053 + 6.60 0.000 intron (NM_016478, intron 2 of 9) L1MC4a|LINE|L1 6437 NM_001363701 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 HSPC216|NIPA zinc finger C3HC-type containing 1 protein-coding chrX-3593 chrX 79872652 79872862 + 6.60 0.000 Intergenic L1PA14|LINE|L1 -141996 NM_001109879 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr4-5915 chr4 142900426 142900636 + 6.60 0.000 Intergenic L1PA15|LINE|L1 -53996 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr1-7824 chr1 62460545 62460755 + 6.60 0.000 intron (NM_001367561, intron 48 of 49) intron (NM_001367561, intron 48 of 49) 23601 NM_003368 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr2-7708 chr2 33127057 33127267 + 6.60 0.000 intron (NM_206943, intron 4 of 33) intron (NM_206943, intron 4 of 33) -7435 NM_000627 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chrX-3518 chrX 47627986 47628196 + 6.60 0.000 intron (NM_001145252, intron 3 of 8) intron (NM_001145252, intron 3 of 8) 1839 NM_001145252 5199 Hs.53155 NM_002621 ENSG00000126759 CFP BFD|PFC|PFD|PROPERDIN complement factor properdin protein-coding chr8-1927 chr8 40850022 40850232 + 6.60 0.000 intron (NM_024645, intron 1 of 6) L2a|LINE|L2 47699 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr16-4122 chr16 3174078 3174288 + 6.60 0.000 Intergenic Intergenic -14021 NM_001370640 4992 Hs.664502 NM_012360 ENSG00000168124 OR1F1 OLFMF|OR16-36|OR16-37|OR16-88|OR16-89|OR16-90|OR1F10|OR1F13P|OR1F4|OR1F5|OR1F6|OR1F7|OR1F8|OR1F9|OR3-145|ORL1023 olfactory receptor family 1 subfamily F member 1 protein-coding chr10-4970 chr10 29668100 29668310 + 6.60 0.000 intron (NM_001323599, intron 2 of 38) AluJo|SINE|Alu -33234 NM_021738 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr5-5872 chr5 6490999 6491209 + 6.60 0.000 intron (NM_001145161, intron 1 of 1) intron (NM_001145161, intron 1 of 1) 42245 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr3-9270 chr3 41137122 41137332 + 6.60 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -62278 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr13-1795 chr13 26817160 26817370 + 6.60 0.000 Intergenic Intergenic -56479 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr10-3057 chr10 132708638 132708848 + 6.60 0.000 intron (NM_005539, intron 7 of 15) intron (NM_005539, intron 7 of 15) 27468 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr6-8486 chr6 157180606 157180816 + 6.60 0.000 intron (NM_001363725, intron 9 of 17) intron (NM_001363725, intron 9 of 17) 143548 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr7-5974 chr7 101339305 101339515 + 6.60 0.000 Intergenic AluSq|SINE|Alu -17587 NM_001287526 64792 Hs.389104 NM_022777 ENSG00000128581 IFT22 RABL5 intraflagellar transport 22 protein-coding chr2-13288 chr2 128993850 128994060 + 6.60 0.000 Intergenic Intergenic 129355 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr6-6640 chr6 155755440 155755650 + 6.60 0.000 Intergenic Intergenic -191252 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr21-1076 chr21 32090083 32090293 + 6.60 0.000 Intergenic MIRc|SINE|MIR -3893 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr6-7018 chr6 23237945 23238155 + 6.60 0.000 Intergenic L1MC2|LINE|L1 -520126 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr11-8156 chr11 60615264 60615474 + 6.60 0.000 promoter-TSS (NR_026946) promoter-TSS (NR_026946) -382 NR_026946 283197 Hs.372650 NM_174939 ENSG00000181995 LINC00301 C11orf64|NCRNA00301 long intergenic non-protein coding RNA 301 ncRNA chr4-8084 chr4 123472128 123472338 + 6.60 0.000 Intergenic L1MC4|LINE|L1 72693 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr20-1924 chr20 8348478 8348688 + 6.60 0.000 intron (NM_182734, intron 2 of 32) MLT1J|LTR|ERVL-MaLR 99879 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr2-12972 chr2 104677950 104678160 + 6.60 0.000 Intergenic Intergenic 79664 NR_038231 284998 Hs.410180 NR_038231 ENSG00000234177 LINC01114 PANCAT long intergenic non-protein coding RNA 1114 ncRNA chr10-1729 chr10 103599196 103599406 + 6.60 0.000 3' UTR (NM_014631, exon 14 of 14) 3' UTR (NM_014631, exon 14 of 14) 78914 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr4-4490 chr4 57393429 57393639 + 6.60 0.000 Intergenic Intergenic -32338 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr1-16418 chr1 225908106 225908316 + 6.60 0.000 Intergenic AluJr|SINE|Alu 13931 NR_106799 102466270 NR_106799 ENSG00000284519 MIR6741 hsa-mir-6741 microRNA 6741 ncRNA chr12-8039 chr12 114093691 114093901 + 6.60 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -127471 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr12-2265 chr12 96510235 96510445 + 6.60 0.000 intron (NM_001306084, intron 4 of 67) intron (NM_001306084, intron 4 of 67) 20763 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr6-5858 chr6 36312689 36312899 + 6.60 0.000 Intergenic Intergenic 24094 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chr12-4213 chr12 104050599 104050809 + 6.60 0.000 intron (NM_031302, intron 1 of 11) intron (NM_031302, intron 1 of 11) 13473 NM_001316967 83468 Hs.631650 NM_031302 ENSG00000120820 GLT8D2 - glycosyltransferase 8 domain containing 2 protein-coding chr11-7823 chr11 109290474 109290684 + 6.60 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -131611 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr8-2063 chr8 123440120 123440330 + 6.60 0.000 intron (NM_018024, intron 5 of 5) AluSx1|SINE|Alu 23451 NM_018024 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr8-6341 chr8 51456309 51456519 + 6.60 0.000 intron (NM_144651, intron 9 of 22) intron (NM_144651, intron 9 of 22) 353031 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr1-10169 chr1 110139049 110139259 + 6.60 0.000 Intergenic L2a|LINE|L2 -11340 NM_001010898 388662 Hs.128382 NM_001010898 ENSG00000197106 SLC6A17 MRT48|NTT4 solute carrier family 6 member 17 protein-coding chr3-8435 chr3 114858255 114858465 + 6.60 0.000 intron (NM_001348805, intron 4 of 10) intron (NM_001348805, intron 4 of 10) -14673 NR_126422 104413890 Hs.612732 NR_126422 ENSG00000239946 ZBTB20-AS3 - ZBTB20 antisense RNA 3 ncRNA chr1-14470 chr1 47692625 47692835 + 6.60 0.000 Intergenic Intergenic -255413 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr6-5429 chr6 157346534 157346744 + 6.60 0.000 Intergenic Intergenic -22380 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr5-4676 chr5 38079405 38079615 + 6.60 0.000 intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) 53813 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr2-14210 chr2 209069878 209070088 + 6.60 0.000 Intergenic Intergenic -354064 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr19-5067 chr19 50591656 50591866 + 6.60 0.000 Intergenic LTR9D|LTR|ERV1 -13202 NR_004384 100126781 Hs.707968 NR_004384 SNAR-F - small NF90 (ILF3) associated RNA F snRNA chrX-4742 chrX 93149179 93149389 + 6.60 0.000 Intergenic LTR12_|LTR|ERV1 -324381 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr1-7473 chr1 85623252 85623462 + 6.60 0.000 Intergenic Intergenic 42596 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr8-6039 chr8 23824132 23824342 + 6.60 0.000 Intergenic Intergenic 30569 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr15-5154 chr15 91790210 91790420 + 6.60 0.000 Intergenic MER112|DNA|hAT-Charlie -63393 NM_013272 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr12-7522 chr12 69208949 69209159 + 6.60 0.000 Intergenic AluJb|SINE|Alu -30515 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr5-6071 chr5 6721451 6721661 + 6.60 0.000 intron (NM_001171805, intron 1 of 12) intron (NM_001171805, intron 1 of 12) 8124 NM_001171805 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr19-4904 chr19 41838699 41838909 + 6.60 0.000 intron (NM_001291419, intron 3 of 4) intron (NM_001291419, intron 3 of 4) 4923 NM_001291419 147719 Hs.98660 NM_173506 ENSG00000273111 LYPD4 SMR LY6/PLAUR domain containing 4 protein-coding chr11-5344 chr11 62909255 62909465 + 6.60 0.000 3' UTR (NM_000738, exon 2 of 2) 3' UTR (NM_000738, exon 2 of 2) 12003 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr8-3204 chr8 121469844 121470054 + 6.60 0.000 Intergenic Intergenic -169397 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr14-5241 chr14 99275718 99275928 + 6.60 0.000 Intergenic Intergenic -3626 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr14-4633 chr14 53897013 53897223 + 6.60 0.000 Intergenic Intergenic 51366 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr1-7766 chr1 39645035 39645245 + 6.60 0.000 Intergenic Intergenic -5497 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr16-4720 chr16 82695085 82695295 + 6.60 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 6259 NR_107025 102465863 NR_107025 ENSG00000277387 MIR8058 hsa-mir-8058 microRNA 8058 ncRNA chr5-7607 chr5 43963548 43963758 + 6.60 0.000 Intergenic L1PA7|LINE|L1 -360423 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr6-3104 chr6 96648015 96648225 + 6.60 0.000 Intergenic Intergenic 84995 NM_001322467 9457 Hs.632608 NM_020482 ENSG00000112214 FHL5 1700027G07Rik|ACT|FHL-5|dJ393D12.2 four and a half LIM domains 5 protein-coding chr8-3293 chr8 23219886 23220096 + 6.60 0.000 intron (NM_003844, intron 1 of 9) MIRc|SINE|MIR 5111 NM_003844 8797 Hs.213467 NM_003844 ENSG00000104689 TNFRSF10A APO2|CD261|DR4|TRAILR-1|TRAILR1 TNF receptor superfamily member 10a protein-coding chrX-4887 chrX 107029489 107029699 + 6.60 0.000 Intergenic AluJo|SINE|Alu -29382 NM_001085354 79710 Hs.496544 NM_024657 ENSG00000133131 MORC4 ZCW4|ZCWCC2|dJ75H8.2 MORC family CW-type zinc finger 4 protein-coding chr19-7097 chr19 56886473 56886683 + 6.60 0.000 Intergenic Charlie2b|DNA|hAT-Charlie 45676 NR_024059 100073347 Hs.467337 NR_024059 ENSG00000268654 MIMT1 LINC00067|MIM1|NCRNA00067 MER1 repeat containing imprinted transcript 1 ncRNA chr1-9999 chr1 84726750 84726960 + 6.60 0.000 Intergenic MLT2D|LTR|ERVL -36387 NM_001166295 117178 Hs.22587 NM_014021 ENSG00000117155 SSX2IP ADIP|hMsd1 SSX family member 2 interacting protein protein-coding chr1-6814 chr1 93652617 93652827 + 6.60 0.000 intron (NM_001261409, intron 2 of 11) intron (NM_001261409, intron 2 of 11) 28648 NM_001261409 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr8-6776 chr8 93388781 93388991 + 6.60 0.000 intron (NR_033858, intron 9 of 10) MIRb|SINE|MIR -222036 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr5-8294 chr5 114289091 114289301 + 6.60 0.000 Intergenic L1MB5|LINE|L1 -72874 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr6-2348 chr6 129210646 129210856 + 6.60 0.000 intron (NM_000426, intron 12 of 64) intron (NM_000426, intron 12 of 64) 327610 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr10-7762 chr10 33841357 33841567 + 6.60 0.000 Intergenic L1PA17|LINE|L1 -68782 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr4-6677 chr4 2696899 2697109 + 6.60 0.000 intron (NM_001256668, intron 16 of 19) intron (NM_001256668, intron 16 of 19) 59332 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr10-5542 chr10 86411634 86411844 + 6.60 0.000 Intergenic Intergenic -44944 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr10-7500 chr10 12219885 12220095 + 6.60 0.000 intron (NM_006023, intron 6 of 12) AluSg|SINE|Alu 23802 NM_006023 8872 Hs.412842 NM_006023 ENSG00000151465 CDC123 C10orf7|D123 cell division cycle 123 protein-coding chr5-6262 chr5 96758590 96758800 + 6.60 0.000 intron (NM_001042446, intron 19 of 26) intron (NM_001042446, intron 19 of 26) 15093 NR_104285 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr6-5501 chr6 163996537 163996747 + 6.60 0.000 Intergenic Intergenic -325158 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr9-3817 chr9 129400862 129401072 + 6.60 0.000 Intergenic Intergenic 64044 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr2-9000 chr2 194683229 194683439 + 6.60 0.000 Intergenic (TAA)n|Simple_repeat|Simple_repeat -47261 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr14-5269 chr14 100201990 100202200 + 6.60 0.000 Intergenic Intergenic -37049 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr17-7806 chr17 40155759 40155969 + 6.60 0.000 intron (NM_007359, intron 3 of 13) intron (NM_007359, intron 3 of 13) -6069 NR_106926 102466986 NR_106926 ENSG00000284144 MIR6866 hsa-mir-6866 microRNA 6866 ncRNA chr11-10044 chr11 83465307 83465517 + 6.60 0.000 intron (NM_001142699, intron 26 of 27) intron (NM_001142699, intron 26 of 27) -179005 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr13-2648 chr13 80054906 80055116 + 6.60 0.000 Intergenic Intergenic 43934 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr3-9185 chr3 35000047 35000257 + 6.60 0.000 intron (NR_110817, intron 2 of 3) L1MDa|LINE|L1 393871 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr1-16166 chr1 206133356 206133566 + 6.60 0.000 Intergenic AluSz|SINE|Alu -16073 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr5-6705 chr5 66632566 66632776 + 6.60 0.000 intron (NM_001290228, intron 1 of 4) (TGTA)n|Simple_repeat|Simple_repeat 36278 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr10-3213 chr10 101726599 101726809 + 6.60 0.000 Intergenic AluSx1|SINE|Alu -31409 NM_001323541 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr6-7538 chr6 69304333 69304543 + 6.60 0.000 intron (NM_001704, intron 20 of 31) intron (NM_001704, intron 20 of 31) 492028 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr3-7463 chr3 133927440 133927650 + 6.60 0.000 TTS (NR_161373) TTS (NR_161373) 2267 NR_161373 80111 Hs.287691 NM_025041 ENSG00000174640 C3orf36 - chromosome 3 open reading frame 36 ncRNA chr15-4227 chr15 27263319 27263529 + 6.60 0.000 intron (NM_001270873, intron 3 of 5) intron (NM_001270873, intron 3 of 5) -102105 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr8-4893 chr8 75449278 75449488 + 6.60 0.000 intron (NM_001330561, intron 1 of 11) L1MA8|LINE|L1 41734 NM_001330561 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr15-1706 chr15 73580788 73580998 + 6.60 0.000 intron (NM_012428, intron 4 of 8) MIRb|SINE|MIR -11350 NR_103844 101241892 Hs.656678 NR_103844 ENSG00000281183 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1 ncRNA chr1-10437 chr1 159366407 159366617 + 6.60 0.000 Intergenic Intergenic -30953 NM_001363557 26476 Hs.532661 NM_012351 ENSG00000196184 OR10J1 HGMP07J|HSHGMP07J olfactory receptor family 10 subfamily J member 1 protein-coding chr14-4661 chr14 55100752 55100962 + 6.60 0.000 Intergenic L1MC4|LINE|L1 -28395 NM_002306 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr13-2706 chr13 92790002 92790212 + 6.60 0.000 intron (NM_004466, intron 7 of 7) MLT2A2|LTR|ERVL -68493 NR_046520 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA chr4-7355 chr4 57572163 57572373 + 6.60 0.000 Intergenic MSTD|LTR|ERVL-MaLR 146396 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr10-7491 chr10 11730215 11730425 + 6.60 0.000 Intergenic MER52A|LTR|ERV1 -12062 NM_024693 79746 Hs.22242 NM_024693 ENSG00000134463 ECHDC3 - enoyl-CoA hydratase domain containing 3 protein-coding chr5-3289 chr5 117516297 117516507 + 6.60 0.000 intron (NR_046089, intron 3 of 5) intron (NR_046089, intron 3 of 5) 100890 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr14-4141 chr14 74395969 74396179 + 6.60 0.000 Intergenic Intergenic 30136 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr1-11600 chr1 217660471 217660681 + 6.60 0.000 intron (NM_138796, intron 3 of 10) intron (NM_138796, intron 3 of 10) 29232 NM_138796 128153 Hs.171130 NM_138796 ENSG00000162814 SPATA17 IQCH|MSRG-11|MSRG11 spermatogenesis associated 17 protein-coding chr2-14822 chr2 241411042 241411252 + 6.60 0.000 intron (NM_014808, intron 6 of 26) intron (NM_014808, intron 6 of 26) 54862 NM_001282983 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr12-6221 chr12 27096586 27096796 + 6.60 0.000 Intergenic Intergenic -14169 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr16-5020 chr16 48522749 48522959 + 6.60 0.000 Intergenic Intergenic 87326 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr20-3164 chr20 41048993 41049203 + 6.60 0.000 intron (NM_003286, intron 2 of 20) intron (NM_003286, intron 2 of 20) 20276 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr1-13825 chr1 19492924 19493134 + 6.60 0.000 Intergenic Intergenic -7490 NM_001206540 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr20-2031 chr20 63817758 63817968 + 6.60 0.000 intron (NR_110081, intron 1 of 2) MLT1C|LTR|ERVL-MaLR 9787 NR_110081 101928604 Hs.676054 NR_110081 ZBTB46-AS1 - ZBTB46 antisense RNA 1 ncRNA chr4-6883 chr4 12889789 12889999 + 6.60 0.000 Intergenic Intergenic 594446 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr10-7973 chr10 58681170 58681380 + 6.60 0.000 intron (NM_001080512, intron 2 of 20) L1PA7|LINE|L1 -33740 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr3-10920 chr3 172919224 172919434 + 6.60 0.000 intron (NM_031955, intron 8 of 10) intron (NM_031955, intron 8 of 10) 168327 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr10-6791 chr10 6194751 6194961 + 6.60 0.000 intron (NM_001282630, intron 1 of 14) intron (NM_001282630, intron 1 of 14) -8076 NM_004566 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr7-6327 chr7 143360993 143361203 + 6.60 0.000 intron (NM_001371250, intron 1 of 6) intron (NM_001371250, intron 1 of 6) 982 NM_014690 9715 Hs.648908 NM_014690 ENSG00000159784 FAM131B - family with sequence similarity 131 member B protein-coding chr15-3415 chr15 89780591 89780801 + 6.60 0.000 Intergenic Intergenic 4364 NM_001039958 145873 Hs.37311 NM_001039958 ENSG00000188095 MESP2 SCDO2|bHLHc6 mesoderm posterior bHLH transcription factor 2 protein-coding chr12-5838 chr12 41175970 41176180 + 6.60 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -12245 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr10-6292 chr10 98996900 98997110 + 6.60 0.000 intron (NM_021828, intron 3 of 11) L1ME2z|LINE|L1 -72437 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr16-7020 chr16 87968534 87968744 + 6.60 0.000 intron (NM_001173542, intron 1 of 12) intron (NM_001173542, intron 1 of 12) -1379 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr1-11872 chr1 40784787 40784997 + 6.60 0.000 intron (NM_004700, intron 1 of 13) intron (NM_004700, intron 1 of 13) 1105 NM_172163 9132 Hs.473058 NM_004700 ENSG00000117013 KCNQ4 DFNA2|DFNA2A|KV7.4 potassium voltage-gated channel subfamily Q member 4 protein-coding chr11-8324 chr11 76314791 76315001 + 6.60 0.000 Intergenic Intergenic 66069 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr2-7338 chr2 108543 108753 + 6.60 0.000 Intergenic L1MA4A|LINE|L1 -62143 NM_001077710 642273 Hs.8379 NM_001077710 ENSG00000184731 FAM110C - family with sequence similarity 110 member C protein-coding chr1-10048 chr1 90536384 90536594 + 6.60 0.000 Intergenic Intergenic -121261 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr5-2929 chr5 138831696 138831906 + 6.60 0.000 intron (NM_001323985, intron 7 of 17) L2b|LINE|L2 -43429 NM_001324000 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr9-8410 chr9 120245455 120245665 + 6.60 0.000 promoter-TSS (NR_029604) promoter-TSS (NR_029604) -510 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr4-4670 chr4 85080328 85080538 + 6.60 0.000 Intergenic Intergenic 112949 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr1-16436 chr1 226737236 226737446 + 6.60 0.000 exon (NM_002221, exon 2 of 8) exon (NM_002221, exon 2 of 8) 1834 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr8-6816 chr8 97006952 97007162 + 6.60 0.000 intron (NM_016134, intron 5 of 7) intron (NM_016134, intron 5 of 7) 270871 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr3-7043 chr3 173233066 173233276 + 6.60 0.000 Intergenic AluSc|SINE|Alu -91936 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr8-5603 chr8 94626105 94626315 + 6.60 0.000 Intergenic Intergenic 13257 NR_034034 100288748 Hs.608210 NR_034034 ENSG00000261437 LOC100288748 - uncharacterized LOC100288748 ncRNA chr4-6265 chr4 76365470 76365680 + 6.60 0.000 intron (NM_001042784, intron 11 of 23) intron (NM_001042784, intron 11 of 23) 41730 NM_001042784 339965 Hs.529680 NM_178555 ENSG00000163749 CCDC158 - coiled-coil domain containing 158 protein-coding chr18-2278 chr18 75981784 75981994 + 6.60 0.000 Intergenic Intergenic -141109 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA chr15-3355 chr15 83379345 83379555 + 6.60 0.000 Intergenic Intergenic -67778 NM_001301109 6457 Hs.270055 NM_003027 ENSG00000140600 SH3GL3 CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13 SH3 domain containing GRB2 like 3, endophilin A3 protein-coding chr13-3516 chr13 22007997 22008207 + 6.60 0.000 Intergenic Intergenic -129942 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr12-7006 chr12 31544651 31544861 + 6.60 0.000 intron (NM_001308339, intron 1 of 22) L1MC5a|LINE|L1 -45167 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr19-6581 chr19 22335195 22335405 + 6.60 0.000 Intergenic BSR/Beta|Satellite|Satellite 48859 NM_001242680 100287226 Hs.531629 NM_001242680 ENSG00000196350 ZNF729 - zinc finger protein 729 protein-coding chr11-10376 chr11 112099180 112099390 + 6.60 0.000 Intergenic Intergenic 12412 NM_001276503 6392 Hs.356270 NM_003002 ENSG00000204370 SDHD CBT1|CII-4|CWS3|PGL|PGL1|QPs3|SDH4|cybS succinate dehydrogenase complex subunit D protein-coding chrX-4213 chrX 37460693 37460903 + 6.60 0.000 Intergenic HERVH-int|LTR|ERV1 -110863 NM_198511 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chr15-3620 chr15 72165463 72165673 + 6.60 0.000 intron (NM_001012642, intron 7 of 11) intron (NM_001012642, intron 7 of 11) 32219 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr4-6198 chr4 49512624 49512834 + 6.60 0.000 Intergenic Intergenic 526087 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr9-7787 chr9 79372124 79372334 + 6.60 0.000 Intergenic Intergenic -199544 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr3-9811 chr3 73687798 73688008 + 6.60 0.000 Intergenic Intergenic -62962 NM_015009 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr2-10066 chr2 41617549 41617759 + 6.60 0.000 Intergenic Intergenic -259901 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr16-2765 chr16 8656572 8656782 + 6.60 0.000 Intergenic Intergenic -17940 NM_020686 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr16-4824 chr16 87300258 87300468 + 6.60 0.000 Intergenic AluSz|SINE|Alu -7911 NR_104667 101928682 Hs.149004 NR_104667 ENSG00000261697 LOC101928682 - uncharacterized LOC101928682 ncRNA chr14-3568 chr14 105338538 105338748 + 6.60 0.000 intron (NM_015197, intron 1 of 23) intron (NM_015197, intron 1 of 23) -23066 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr13-2881 chr13 111596019 111596229 + 6.60 0.000 intron (NR_135814, intron 1 of 1) intron (NR_135814, intron 1 of 1) 115 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr21-1572 chr21 14321110 14321320 + 6.60 0.000 Intergenic Intergenic 47416 NR_003087 150000 Hs.366575 NM_138726 ENSG00000243064 ABCC13 ABCC13P|C21orf73|PRED6 ATP binding cassette subfamily C member 13 (pseudogene) pseudo chr8-5055 chr8 28513826 28514036 + 6.60 0.000 intron (NM_017412, intron 3 of 7) intron (NM_017412, intron 3 of 7) -8749 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr13-3940 chr13 60275165 60275375 + 6.60 0.000 Intergenic Intergenic -7166 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr15-4244 chr15 33405774 33405984 + 6.60 0.000 intron (NM_001243996, intron 1 of 102) MLT1K|LTR|ERVL-MaLR 94912 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr9-5332 chr9 88363067 88363277 + 6.60 0.000 Intergenic LTR8|LTR|ERV1 -25272 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr9-5823 chr9 129586835 129587045 + 6.60 0.000 Intergenic (CCTCCCTG)n|Simple_repeat|Simple_repeat -21944 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr19-4546 chr19 10219728 10219938 + 6.60 0.000 Intergenic L2a|LINE|L2 -10580 NR_036206 100422925 NR_036206 ENSG00000264266 MIR4322 - microRNA 4322 ncRNA chr14-3275 chr14 80170457 80170667 + 6.60 0.000 Intergenic L2b|LINE|L2 -40857 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chrX-5312 chrX 144391381 144391591 + 6.60 0.000 Intergenic L1ME3Cz|LINE|L1 507415 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr5-3751 chr5 52859830 52860040 + 6.60 0.000 intron (NM_181501, intron 2 of 28) L3|LINE|CR1 72019 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr1-15290 chr1 116299508 116299718 + 6.60 0.000 Intergenic Intergenic -73631 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr2-11864 chr2 22172915 22173125 + 6.60 0.000 Intergenic L1MA8|LINE|L1 -363459 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr5-7182 chr5 6045297 6045507 + 6.60 0.000 Intergenic Intergenic 291890 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr6-6331 chr6 51544495 51544705 + 6.60 0.000 Intergenic Intergenic -77270 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr1-10356 chr1 154687409 154687619 + 6.60 0.000 Intergenic L1ME3D|LINE|L1 -59517 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr11-4572 chr11 125951524 125951734 + 6.60 0.000 intron (NM_001365077, intron 5 of 11) intron (NM_001365077, intron 5 of 11) 5573 NM_001365077 338667 Hs.730137 NM_001365077 VSIG10L2 - V-set and immunoglobulin domain containing 10 like 2 protein-coding chr5-4531 chr5 15691658 15691868 + 6.60 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -76761 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr11-8412 chr11 101863481 101863691 + 6.60 0.000 Intergenic Intergenic -51424 NM_001363543 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr20-4337 chr20 53839565 53839775 + 6.60 0.000 Intergenic Intergenic 36039 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr3-5850 chr3 33026356 33026566 + 6.60 0.000 intron (NM_001079811, intron 10 of 15) MER52D|LTR|ERV1 70371 NM_001079811 2720 Hs.443031 NM_000404 ENSG00000170266 GLB1 EBP|ELNR1|MPS4B galactosidase beta 1 protein-coding chr14-3846 chr14 75985688 75985898 + 6.60 0.000 promoter-TSS (NM_052873) promoter-TSS (NM_052873) 30 NM_001255995 112752 Hs.532626 NM_052873 ENSG00000119650 IFT43 C14orf179|CED3|RP81|SRTD18 intraflagellar transport 43 protein-coding chr7-9511 chr7 138690423 138690633 + 6.60 0.000 Intergenic L1MB7|LINE|L1 -11483 NM_001139456 136306 Hs.99414 NM_174959 ENSG00000157703 SVOPL - SVOP like protein-coding chr5-4894 chr5 67475670 67475880 + 6.60 0.000 Intergenic Intergenic 171014 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr5-3614 chr5 130345152 130345362 + 6.60 0.000 Intergenic L1M4b|LINE|L1 440792 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chrX-4621 chrX 76279156 76279366 + 6.60 0.000 Intergenic L1MA8|LINE|L1 106199 NM_016500 51260 Hs.370100 NM_016500 ENSG00000102390 PBDC1 CXorf26 polysaccharide biosynthesis domain containing 1 protein-coding chr11-6175 chr11 44828811 44829021 + 6.60 0.000 intron (NM_130783, intron 2 of 9) L2b|LINE|L2 101954 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr6-7093 chr6 34104035 34104245 + 6.60 0.000 intron (NM_001256813, intron 1 of 10) intron (NM_001256813, intron 1 of 10) 1827 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr16-2857 chr16 85875310 85875520 + 6.60 0.000 Intergenic L1PA5|LINE|L1 -23747 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr17-7670 chr17 30324190 30324400 + 6.60 0.000 intron (NM_206832, intron 4 of 6) intron (NM_206832, intron 4 of 6) 9762 NM_206832 388364 Hs.371005 NM_206832 ENSG00000182271 TMIGD1 TMIGD|UNQ9372 transmembrane and immunoglobulin domain containing 1 protein-coding chr10-4887 chr10 18477602 18477812 + 6.60 0.000 intron (NM_201593, intron 3 of 13) MER4C|LTR|ERV1 77132 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr2-12098 chr2 33740237 33740447 + 6.60 0.000 intron (NR_126403, intron 1 of 5) L1PB1|LINE|L1 -12125 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr7-5333 chr7 27988255 27988465 + 6.60 0.000 intron (NM_175061, intron 2 of 4) L1M5|LINE|L1 -192097 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr15-3056 chr15 60710975 60711185 + 6.60 0.000 intron (NM_134261, intron 1 of 10) MIR3|SINE|MIR 29511 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr6-5116 chr6 120359291 120359501 + 6.60 0.000 Intergenic AluSc8|SINE|Alu 344217 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr8-6059 chr8 25179574 25179784 + 6.60 0.000 Intergenic Intergenic -5010 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr17-4779 chr17 44898681 44898891 + 6.60 0.000 promoter-TSS (NM_001258399) promoter-TSS (NM_001258399) 582 NM_001258353 9343 Hs.151787 NM_004247 ENSG00000108883 EFTUD2 MFDGA|MFDM|SNRNP116|Snrp116|Snu114|U5-116KD elongation factor Tu GTP binding domain containing 2 protein-coding chr6-6305 chr6 43053023 43053233 + 6.60 0.000 TTS (NM_001300848) TTS (NM_001300848) 817 NM_001168370 9820 Hs.520136 NM_014780 ENSG00000044090 CUL7 3M1|CUL-7|KIAA0076|dJ20C7.5 cullin 7 protein-coding chr9-6687 chr9 136536048 136536258 + 6.60 0.000 intron (NM_017617, intron 2 of 33) intron (NM_017617, intron 2 of 33) 9895 NM_017617 4851 Hs.495473 NM_017617 ENSG00000148400 NOTCH1 AOS5|AOVD1|TAN1|hN1 notch receptor 1 protein-coding chr3-10315 chr3 126676797 126677007 + 6.60 0.000 Intergenic Intergenic 14821 NR_034158 255330 Hs.145435 NM_174935 ENSG00000198284 NUP210P1 C3orf46 nucleoporin 210 pseudogene 1 pseudo chr16-5213 chr16 23132946 23133156 + 6.60 0.000 intron (NM_020718, intron 1 of 15) intron (NM_020718, intron 1 of 15) 16219 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr1-9479 chr1 36555372 36555582 + 6.60 0.000 Intergenic Intergenic -72163 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr4-7530 chr4 75703475 75703685 + 6.60 0.000 Intergenic Intergenic -20942 NM_001290049 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr9-8043 chr9 96075679 96075889 + 6.60 0.000 intron (NR_033838, intron 1 of 8) intron (NR_033838, intron 1 of 8) 9945 NR_033838 158435 Hs.652615 NR_033838 LOC158435 - uncharacterized LOC158435 ncRNA chr17-5818 chr17 64852543 64852753 + 6.60 0.000 Intergenic Intergenic -15464 NR_024386 440456 Hs.646585 NR_024386 PLEKHM1P1 PLEKHM1P pleckstrin homology and RUN domain containing M1 pseudogene 1 pseudo chr13-2627 chr13 77566660 77566870 + 6.60 0.000 intron (NM_003843, intron 5 of 31) MLT1J2|LTR|ERVL-MaLR 31059 NM_144777 8796 Hs.534699 NM_003843 ENSG00000136155 SCEL - sciellin protein-coding chr2-12732 chr2 82157640 82157850 + 6.60 0.000 Intergenic Intergenic -690799 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr15-3787 chr15 68833759 68833969 + 6.60 0.000 Intergenic Intergenic -12969 NM_006305 8125 Hs.458747 NM_006305 ENSG00000140350 ANP32A C15orf1|HPPCn|I1PP2A|LANP|MAPM|PHAP1|PHAPI|PP32 acidic nuclear phosphoprotein 32 family member A protein-coding chr15-4415 chr15 44468883 44469093 + 6.60 0.000 intron (NM_016396, intron 2 of 12) MER44B|DNA|TcMar-Tigger 41359 NM_016396 51496 Hs.497967 NM_016396 ENSG00000137770 CTDSPL2 HSPC058|HSPC129 CTD small phosphatase like 2 protein-coding chr4-6515 chr4 163328342 163328552 + 6.60 0.000 intron (NM_000909, intron 1 of 2) intron (NM_000909, intron 1 of 2) 4149 NM_000909 4886 Hs.519057 NM_000909 ENSG00000164128 NPY1R NPY1-R|NPYR neuropeptide Y receptor Y1 protein-coding chr22-3864 chr22 33401850 33402060 + 6.60 0.000 intron (NM_133642, intron 7 of 14) LTR33A|LTR|ERVL 34714 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr13-4260 chr13 97498528 97498738 + 6.60 0.000 Intergenic Intergenic 64464 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr4-3436 chr4 84750386 84750596 + 6.60 0.000 intron (NM_014991, intron 36 of 67) intron (NM_014991, intron 36 of 67) 167364 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr6-8600 chr6 167571440 167571650 + 6.60 0.000 Intergenic MIRb|SINE|MIR -98755 NR_134591 105378127 Hs.58456 NR_134591 LOC105378127 - uncharacterized LOC105378127 ncRNA chr1-14934 chr1 85909616 85909826 + 6.60 0.000 intron (NM_152890, intron 26 of 59) intron (NM_152890, intron 26 of 59) -201288 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr15-2785 chr15 34024083 34024293 + 6.60 0.000 intron (NM_020371, intron 1 of 5) L2a|LINE|L2 15016 NM_020371 57099 Hs.555966 NM_020371 ENSG00000169857 AVEN PDCD12 apoptosis and caspase activation inhibitor protein-coding chr14-4377 chr14 27250885 27251095 + 6.60 0.000 Intergenic L1PA7|LINE|L1 342348 NR_036193 100423019 NR_036193 ENSG00000265165 MIR4307 - microRNA 4307 ncRNA chr3-7914 chr3 140520892 140521102 + 6.60 0.000 intron (NM_022131, intron 8 of 16) L1PA10|LINE|L1 -12208 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr9-7291 chr9 8807705 8807915 + 6.60 0.000 intron (NM_002839, intron 11 of 45) intron (NM_002839, intron 11 of 45) -50208 NR_121599 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr11-5053 chr11 102423331 102423541 + 6.60 0.000 intron (NM_052932, intron 2 of 4) MLT1F1|LTR|ERVL-MaLR 29329 NM_052932 114908 Hs.503709 NM_052932 ENSG00000152558 TMEM123 KCT3|PORIMIN|PORMIN transmembrane protein 123 protein-coding chr9-3861 chr9 132202782 132202992 + 6.60 0.000 intron (NM_032536, intron 3 of 7) MIRb|SINE|MIR 40829 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr4-5489 chr4 76822321 76822531 + 6.60 0.000 Intergenic Intergenic 75718 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr8-3169 chr8 95530157 95530367 + 6.60 0.000 intron (NR_038207, intron 2 of 2) Tigger2|DNA|TcMar-Tigger -261061 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr14-4628 chr14 53519144 53519354 + 6.60 0.000 Intergenic Intergenic 365895 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr4-5871 chr4 123614665 123614875 + 6.60 0.000 Intergenic Intergenic -35221 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr11-4243 chr11 64933855 64934065 + 6.60 0.000 TTS (NM_130769) TTS (NM_130769) 1933 NM_130769 170589 Hs.436119 NM_130769 ENSG00000149735 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone subunit alpha 2 protein-coding chrX-4153 chrX 30621846 30622056 + 6.60 0.000 Intergenic AluYg6|SINE|Alu -31408 NM_001128127 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr1-14647 chr1 58083319 58083529 + 6.60 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 167079 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr20-4080 chr20 39260622 39260832 + 6.60 0.000 Intergenic L2|LINE|L2 -35979 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr3-6453 chr3 105808832 105809042 + 6.60 0.000 intron (NR_135809, intron 3 of 18) intron (NR_135809, intron 3 of 18) 58654 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr17-5491 chr17 41699390 41699600 + 6.60 0.000 Intergenic Intergenic 10610 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding chr15-3342 chr15 81541072 81541282 + 6.60 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -166964 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr14-4677 chr14 56067992 56068202 + 6.60 0.000 Intergenic Intergenic -50314 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr7-5338 chr7 28426179 28426389 + 6.60 0.000 intron (NM_182898, intron 1 of 10) MIRb|SINE|MIR -9331 NM_004904 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr21-1146 chr21 39670187 39670397 + 6.60 0.000 3' UTR (NM_001356339, exon 3 of 3) 3' UTR (NM_001356339, exon 3 of 3) 12959 NM_033170 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr19-6911 chr19 45826121 45826331 + 6.60 0.000 exon (NM_004819, exon 17 of 27) exon (NM_004819, exon 17 of 27) -10918 NM_030785 81492 Hs.146544 NM_030785 ENSG00000104941 RSPH6A RSHL1|RSP4|RSP6|RSPH4B radial spoke head 6 homolog A protein-coding chr1-16653 chr1 241012484 241012694 + 6.60 0.000 intron (NM_001350116, intron 3 of 16) intron (NM_001350116, intron 3 of 16) -119683 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr15-2917 chr15 44287868 44288078 + 6.60 0.000 promoter-TSS (NM_138423) promoter-TSS (NM_138423) -746 NM_138423 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chr1-6553 chr1 30911294 30911504 + 6.60 0.000 Intergenic L3|LINE|CR1 -2641 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr10-8834 chr10 110260834 110261044 + 6.60 0.000 intron (NM_005962, intron 3 of 5) intron (NM_005962, intron 3 of 5) 34943 NM_005962 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr18-2113 chr18 51562837 51563047 + 6.60 0.000 TTS (NR_040074) TTS (NR_040074) 170900 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chrX-3986 chrX 14452675 14452885 + 6.60 0.000 Intergenic Intergenic -76518 NM_001171942 2742 Hs.2700 NM_002063 ENSG00000101958 GLRA2 GLR glycine receptor alpha 2 protein-coding chr5-3898 chr5 152046488 152046698 + 6.60 0.000 intron (NR_109876, intron 1 of 2) L2a|LINE|L2 87695 NR_109876 101927115 Hs.549665 NR_109876 ENSG00000254226 LINC01933 CTB-12O2.1 long intergenic non-protein coding RNA 1933 ncRNA chr3-10628 chr3 147049880 147050090 + 6.60 0.000 Intergenic Intergenic 128062 NR_135560 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr3-8681 chr3 182923488 182923698 + 6.60 0.000 Intergenic L1ME2|LINE|L1 56945 NM_020640 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr11-8007 chr11 13620292 13620502 + 6.60 0.000 Intergenic L1PA15|LINE|L1 -48271 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding chrX-1249 chrX 98030819 98031029 + 6.60 0.000 Intergenic AluJb|SINE|Alu -466389 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr21-1216 chr21 45115267 45115477 + 6.60 0.000 intron (NM_001346688, intron 1 of 11) intron (NM_001346688, intron 1 of 11) -37158 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr2-9529 chr2 238567600 238567810 + 6.60 0.000 Intergenic LTR1A2|LTR|ERV1 -12206 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr13-3754 chr13 42574502 42574712 + 6.60 0.000 intron (NM_003701, intron 1 of 4) intron (NM_003701, intron 1 of 4) 455 NM_003701 8600 Hs.333791 NM_003701 ENSG00000120659 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf TNF superfamily member 11 protein-coding chr16-6443 chr16 56893095 56893305 + 6.60 0.000 intron (NM_001126108, intron 21 of 25) intron (NM_001126108, intron 21 of 25) -11064 NR_106923 102466752 NR_106923 ENSG00000283471 MIR6863 hsa-mir-6863 microRNA 6863 ncRNA chr12-6780 chr12 9005107 9005317 + 6.60 0.000 intron (NM_005810, intron 3 of 4) L1PA7|LINE|L1 15587 NR_137428 10219 Hs.558446 NM_005810 ENSG00000139187 KLRG1 2F1|CLEC15A|MAFA|MAFA-2F1|MAFA-L|MAFA-LIKE killer cell lectin like receptor G1 protein-coding chr9-7599 chr9 36821033 36821243 + 6.60 0.000 Intergenic Intergenic 2461 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr16-6669 chr16 69710890 69711100 + 6.60 0.000 exon (NM_001025433, exon 5 of 5) exon (NM_001025433, exon 5 of 5) -2320 NR_145753 109617018 NR_145753 SNORD13H - small nucleolar RNA, C/D box 13H snoRNA chr7-5198 chr7 11612771 11612981 + 6.60 0.000 intron (NM_015204, intron 2 of 26) L1ME3G|LINE|L1 219322 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr13-3776 chr13 44106608 44106818 + 6.60 0.000 intron (NR_132368, intron 3 of 3) L2c|LINE|L2 -3836 NR_104065 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr4-5473 chr4 61530541 61530751 + 6.60 0.000 intron (NM_001371343, intron 4 of 23) intron (NM_001371343, intron 4 of 23) 328474 NM_001371342 chr10-8399 chr10 83959663 83959873 + 6.60 0.000 Intergenic Intergenic -179741 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr22-2149 chr22 40509805 40510015 + 6.60 0.000 intron (NM_020831, intron 3 of 14) intron (NM_020831, intron 3 of 14) -11890 NR_109965 101927257 Hs.662725 NR_109965 ENSG00000232564 MRTFA-AS1 - MRTFA antisense RNA 1 ncRNA chr3-9266 chr3 40226549 40226759 + 6.60 0.000 intron (NM_001284424, intron 11 of 15) MIRb|SINE|MIR 83044 NR_033965 440952 Hs.660388 NR_033965 ENSG00000280739 EIF1B-AS1 - EIF1B antisense RNA 1 ncRNA chr1-16245 chr1 210694410 210694620 + 6.60 0.000 intron (NM_002238, intron 10 of 10) intron (NM_002238, intron 10 of 10) 365149 NM_001170580 55733 Hs.58650 NM_018194 ENSG00000054392 HHAT MART2|SKI1|Skn hedgehog acyltransferase protein-coding chr3-7876 chr3 127490891 127491101 + 6.60 0.000 Intergenic Intergenic 46784 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr12-6689 chr12 3405559 3405769 + 6.60 0.000 intron (NM_001256536, intron 1 of 9) THE1C-int|LTR|ERVL-MaLR 24315 NM_001256536 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr5-7496 chr5 35115918 35116128 + 6.60 0.000 intron (NR_037910, intron 1 of 7) intron (NR_037910, intron 1 of 7) 2099 NR_037910 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr8-7383 chr8 138867337 138867547 + 6.60 0.000 intron (NM_152888, intron 3 of 64) intron (NM_152888, intron 3 of 64) 46599 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr2-14302 chr2 216800301 216800511 + 6.60 0.000 Intergenic Intergenic 59658 NM_003284 7141 Hs.3017 NM_003284 ENSG00000118245 TNP1 TP1 transition protein 1 protein-coding chr17-6706 chr17 79223018 79223228 + 6.60 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 148186 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr4-4008 chr4 1676788 1676998 + 6.60 0.000 intron (NM_001174070, intron 1 of 4) intron (NM_001174070, intron 1 of 4) 7098 NM_001013622 152877 Hs.143314 NM_001013622 ENSG00000174137 FAM53A DNTNP family with sequence similarity 53 member A protein-coding chr12-8036 chr12 114043198 114043408 + 6.60 0.000 Intergenic Intergenic -76978 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr14-3712 chr14 18689435 18689645 + 6.60 0.000 Intergenic AluSz|SINE|Alu -55906 NR_046104 642426 Hs.578301 NR_046104 ENSG00000257504 LINC02297 - long intergenic non-protein coding RNA 2297 ncRNA chr2-12866 chr2 96964329 96964539 + 6.60 0.000 intron (NM_001122646, intron 5 of 16) intron (NM_001122646, intron 5 of 16) 22146 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr9-8203 chr9 108486565 108486775 + 6.60 0.000 Intergenic Intergenic 369316 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr7-6547 chr7 47796890 47797100 + 6.60 0.000 intron (NM_138295, intron 54 of 56) AluY|SINE|Alu 1704 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr16-5362 chr16 85849982 85850192 + 6.60 0.000 Intergenic MIRb|SINE|MIR -49075 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr13-2231 chr13 24725174 24725384 + 6.60 0.000 Intergenic Intergenic -38890 NM_031277 56163 Hs.97464 NM_031277 ENSG00000132972 RNF17 Mmip-2|SPATA23|TDRD4 ring finger protein 17 protein-coding chr2-6699 chr2 25098762 25098972 + 6.60 0.000 intron (NM_014971, intron 3 of 22) intron (NM_014971, intron 3 of 22) 56404 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr12-6609 chr12 127548143 127548353 + 6.60 0.000 Intergenic Intergenic 88219 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LINC02411 - long intergenic non-protein coding RNA 2411 ncRNA chr5-2960 chr5 163554316 163554526 + 6.60 0.000 Intergenic AluSz6|SINE|Alu 48802 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr17-5574 chr17 45230888 45231098 + 6.60 0.000 intron (NM_005892, intron 2 of 26) intron (NM_005892, intron 2 of 26) 9108 NM_005892 752 Hs.100217 NM_005892 ENSG00000184922 FMNL1 C17orf1|C17orf1B|FHOD4|FMNL|KW-13 formin like 1 protein-coding chr5-6583 chr5 26404875 26405085 + 6.60 0.000 Intergenic MLT2A2|LTR|ERVL 633606 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr9-8110 chr9 99259871 99260081 + 6.60 0.000 Intergenic Intergenic 37694 NM_006808 10952 Hs.191887 NM_006808 ENSG00000106803 SEC61B - SEC61 translocon beta subunit protein-coding chr16-2984 chr16 20350569 20350779 + 6.60 0.000 exon (NM_001278614, exon 2 of 12) exon (NM_001278614, exon 2 of 12) 2041 NM_001008389 7369 Hs.654425 NM_003361 ENSG00000169344 UMOD ADMCKD2|FJHN|HNFJ|HNFJ1|MCKD2|THGP|THP uromodulin protein-coding chr5-8553 chr5 135874413 135874623 + 6.60 0.000 intron (NR_146141, intron 6 of 8) intron (NR_146141, intron 6 of 8) 21323 NM_000590 3578 Hs.960 NM_000590 ENSG00000145839 IL9 HP40|IL-9|P40 interleukin 9 protein-coding chr5-3663 chr5 155783964 155784174 + 6.60 0.000 Intergenic Intergenic -542688 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr9-5484 chr9 100493116 100493326 + 6.60 0.000 intron (NM_003692, intron 1 of 9) MER20|DNA|hAT-Charlie 20072 NM_003692 8577 Hs.598100 NM_003692 ENSG00000241697 TMEFF1 C9orf2|CT120.1|H7365|TR-1 transmembrane protein with EGF like and two follistatin like domains 1 protein-coding chr17-5500 chr17 41992674 41992884 + 6.60 0.000 intron (NM_003315, intron 5 of 13) MER126|DNA|DNA 24386 NM_001144766 7266 Hs.500156 NM_003315 ENSG00000168259 DNAJC7 DJ11|DJC7|TPR2|TTC2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding chr7-7841 chr7 4675386 4675596 + 6.60 0.000 Intergenic AluSx|SINE|Alu -6804 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr9-7743 chr9 75388658 75388868 + 6.60 0.000 Intergenic Intergenic 300249 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chrX-4331 chrX 45983978 45984188 + 6.60 0.000 Intergenic Intergenic -132593 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr12-4532 chr12 25552554 25552764 + 6.60 0.000 intron (NM_001352234, intron 1 of 8) intron (NM_001352234, intron 1 of 8) 624 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr16-6395 chr16 53979913 53980123 + 6.60 0.000 intron (NM_001363988, intron 9 of 9) intron (NM_001363988, intron 9 of 9) -59375 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr2-13801 chr2 174184867 174185077 + 6.60 0.000 intron (NM_001011708, intron 3 of 9) MLT1J2|LTR|ERVL-MaLR 63560 NM_001011708 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr8-7375 chr8 138294264 138294474 + 6.60 0.000 intron (NM_015912, intron 3 of 19) L1PB3|LINE|L1 202892 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr2-8743 chr2 160945642 160945852 + 6.60 0.000 Intergenic ERVL-E-int|LTR|ERVL -191208 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr2-2713 chr2 66889180 66889390 + 6.60 0.000 Intergenic Intergenic -15151 NR_110169 101060019 Hs.116425 NR_110169 ENSG00000230525 LINC01799 - long intergenic non-protein coding RNA 1799 ncRNA chr10-4802 chr10 8075259 8075469 + 6.60 0.000 TTS (NM_002051) TTS (NM_002051) 20676 NM_001002295 2625 Hs.524134 NM_002051 ENSG00000107485 GATA3 HDR|HDRS GATA binding protein 3 protein-coding chr7-6483 chr7 5801774 5801984 + 6.60 0.000 Intergenic AluSq2|SINE|Alu -20216 NM_207116 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr14-3021 chr14 55094849 55095059 + 6.60 0.000 Intergenic MER5B|DNA|hAT-Charlie -34298 NM_002306 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr1-16660 chr1 241717288 241717498 + 6.60 0.000 intron (NM_001367482, intron 9 of 27) MIR3|SINE|MIR 65112 NM_001367482 128025 Hs.97527 NM_144625 ENSG00000162843 WDR64 - WD repeat domain 64 protein-coding chr2-10769 chr2 40892546 40892756 + 6.60 0.000 Intergenic L1MC1|LINE|L1 -380216 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr7-8973 chr7 99604510 99604720 + 6.60 0.000 intron (NM_001195543, intron 3 of 5) intron (NM_001195543, intron 3 of 5) 6348 NM_001195543 100289187 Hs.729333 NM_001195541 ENSG00000244219 TMEM225B GS1-259H13.2 transmembrane protein 225B protein-coding chr15-1738 chr15 42369665 42369875 + 6.60 0.000 intron (NM_000070, intron 1 of 23) intron (NM_000070, intron 1 of 23) 10269 NM_000070 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr7-8838 chr7 86637270 86637480 + 6.60 0.000 Intergenic Intergenic -6534 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chrX-4286 chrX 42341586 42341796 + 6.60 0.000 Intergenic L1PA7|LINE|L1 -418137 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr11-3666 chr11 122189119 122189329 + 6.60 0.000 intron (NR_137180, intron 2 of 4) intron (NR_137180, intron 2 of 4) -8592 NR_137183 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr7-8523 chr7 54779808 54780018 + 6.60 0.000 intron (NR_110040, intron 1 of 2) intron (NR_110040, intron 1 of 2) 20600 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr1-12174 chr1 187027094 187027304 + 6.60 0.000 Intergenic L1M2a|LINE|L1 -65643 NR_126347 104169671 NR_126347 ENSG00000230426 LINC01036 - long intergenic non-protein coding RNA 1036 ncRNA chr10-5410 chr10 76106887 76107097 + 6.60 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 324231 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr22-3410 chr22 36742935 36743145 + 6.60 0.000 intron (NR_134623, intron 2 of 3) intron (NR_134623, intron 2 of 3) 33079 NM_006860 11020 Hs.415172 NM_006860 ENSG00000100360 IFT27 BBS19|RABL4|RAYL intraflagellar transport 27 protein-coding chrX-3794 chrX 137157743 137157953 + 6.60 0.000 Intergenic L1MC3|LINE|L1 -126174 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr9-3503 chr9 21778083 21778293 + 6.60 0.000 Intergenic Intergenic -24448 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr11-6130 chr11 39762010 39762220 + 6.60 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 531015 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr4-3642 chr4 17962241 17962451 + 6.60 0.000 intron (NR_158567, intron 2 of 4) intron (NR_158567, intron 2 of 4) 59409 NR_136669 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr11-9235 chr11 41556823 41557033 + 6.60 0.000 Intergenic LTR16B2|LTR|ERVL -97276 NM_001258419 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr13-3509 chr13 21365218 21365428 + 6.60 0.000 intron (NR_046461, intron 3 of 4) intron (NR_046461, intron 3 of 4) -20464 NR_103841 100652865 Hs.659198 NR_103840 LINC00539 LINC00422 long intergenic non-protein coding RNA 539 ncRNA chr10-4241 chr10 129825856 129826066 + 6.60 0.000 Intergenic Intergenic 17413 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr5-7264 chr5 12672247 12672457 + 6.60 0.000 intron (NR_033383, intron 2 of 3) AluJo|SINE|Alu 4493 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr10-8433 chr10 85909833 85910043 + 6.60 0.000 intron (NM_017551, intron 5 of 15) intron (NM_017551, intron 5 of 15) 332207 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr7-8606 chr7 67447636 67447846 + 6.60 0.000 Intergenic AluJr|SINE|Alu 111765 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr15-4332 chr15 40307557 40307767 + 6.60 0.000 exon (NM_001284297, exon 1 of 32) exon (NM_001284297, exon 1 of 32) 273 NM_001284298 5330 Hs.355888 NM_004573 ENSG00000137841 PLCB2 PLC-beta-2 phospholipase C beta 2 protein-coding chr3-6618 chr3 126652007 126652217 + 6.60 0.000 intron (NM_001173513, intron 1 of 14) MSTA|LTR|ERVL-MaLR 3012 NM_052883 114112 Hs.477475 NM_052883 ENSG00000197763 TXNRD3 TGR|TR2|TR2IT1|TRXR3|TXNRD3IT1|TXNRD3NB|TXNRD3NT1 thioredoxin reductase 3 protein-coding chr8-5845 chr8 6363315 6363525 + 6.60 0.000 Intergenic MER11C|LTR|ERVK 43128 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr8-6369 chr8 53352889 53353099 + 6.60 0.000 Intergenic PABL_B|LTR|ERV1 -101297 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr3-5234 chr3 99242388 99242598 + 6.60 0.000 Intergenic MER39|LTR|ERV1 -340798 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr21-1735 chr21 33835765 33835975 + 6.60 0.000 intron (NM_001001132, intron 28 of 29) AluSz|SINE|Alu 79934 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr3-9932 chr3 88427981 88428191 + 6.60 0.000 intron (NM_001368168, intron 2 of 2) THE1C-int|LTR|ERVL-MaLR 89630 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr16-4499 chr16 57789274 57789484 + 6.60 0.000 intron (NM_001318715, intron 2 of 19) intron (NM_001318715, intron 2 of 19) -7010 NM_001318713 3801 Hs.23131 NM_005550 ENSG00000140859 KIFC3 - kinesin family member C3 protein-coding chr3-7661 chr3 36736678 36736888 + 6.60 0.000 intron (NM_033403, intron 2 of 4) intron (NM_033403, intron 2 of 4) 3078 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr21-1758 chr21 35467514 35467724 + 6.60 0.000 intron (NR_073512, intron 1 of 2) intron (NR_073512, intron 1 of 2) 113145 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr1-15120 chr1 102029176 102029386 + 6.60 0.000 Intergenic Intergenic -32047 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr17-6942 chr17 42759524 42759734 + 6.60 0.000 intron (NR_024461, intron 3 of 3) intron (NR_024461, intron 3 of 3) -1598 NM_005854 10266 Hs.514193 NM_005854 ENSG00000131477 RAMP2 - receptor activity modifying protein 2 protein-coding chr20-3659 chr20 10731373 10731583 + 6.60 0.000 Intergenic LTR16A|LTR|ERVL -21612 NR_110611 101929395 Hs.244862 NR_110611 LINC01752 - long intergenic non-protein coding RNA 1752 ncRNA chr15-4314 chr15 39666898 39667108 + 6.60 0.000 intron (NM_152597, intron 10 of 11) intron (NM_152597, intron 10 of 11) 85924 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr5-5603 chr5 151571334 151571544 + 6.60 0.000 Intergenic Intergenic -2495 NM_001447 2196 Hs.591255 NM_001447 ENSG00000086570 FAT2 CDHF8|CDHR9|HFAT2|MEGF1|SCA45 FAT atypical cadherin 2 protein-coding chr4-5171 chr4 157372732 157372942 + 6.60 0.000 Intergenic MamTip3|DNA|hAT-Tip100 152109 NM_000826 2891 Hs.32763 NM_000826 ENSG00000120251 GRIA2 GLUR2|GLURB|GluA2|GluR-K2|HBGR2 glutamate ionotropic receptor AMPA type subunit 2 protein-coding chrX-4315 chrX 44816284 44816494 + 6.60 0.000 Intergenic MIRc|SINE|MIR -27632 NM_022076 63904 Hs.534478 NM_022076 ENSG00000189037 DUSP21 LMWDSP21 dual specificity phosphatase 21 protein-coding chr9-6554 chr9 119090271 119090481 + 6.60 0.000 Intergenic MIRb|SINE|MIR 279059 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr16-6512 chr16 61309575 61309785 + 6.60 0.000 Intergenic Intergenic -253914 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr14-3481 chr14 102196694 102196904 + 6.60 0.000 intron (NM_001353661, intron 3 of 3) intron (NM_001353661, intron 3 of 3) 38627 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr21-420 chr21 46266273 46266483 + 6.60 0.000 intron (NM_003906, intron 10 of 27) intron (NM_003906, intron 10 of 27) 19233 NM_003906 8888 Hs.389037 NM_003906 ENSG00000160294 MCM3AP GANP|MAP80|PNRIID|SAC3 minichromosome maintenance complex component 3 associated protein protein-coding chr2-8990 chr2 192414126 192414336 + 6.60 0.000 Intergenic MER52A|LTR|ERV1 -219298 NM_001305134 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr12-6701 chr12 4484747 4484957 + 6.60 0.000 Intergenic Intergenic -39238 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr7-5731 chr7 73357676 73357886 + 6.60 0.000 intron (NM_001362789, intron 7 of 7) AluSz|SINE|Alu 29620 NM_001281304 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr4-4582 chr4 75986143 75986353 + 6.60 0.000 intron (NM_001288984, intron 1 of 21) AluJo|SINE|Alu 4697 NM_018115 55153 Hs.632604 NM_018115 ENSG00000198301 SDAD1 - SDA1 domain containing 1 protein-coding chr3-8002 chr3 184799595 184799805 + 6.60 0.000 Intergenic FLAM_A|SINE|Alu -12443 NM_001009921 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr3-8465 chr3 124118430 124118640 + 6.60 0.000 intron (NM_001024660, intron 1 of 59) intron (NM_001024660, intron 1 of 59) -14394 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr3-11041 chr3 182877347 182877557 + 6.60 0.000 intron (NM_014616, intron 19 of 29) AluJb|SINE|Alu 83948 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr18-2730 chr18 73429007 73429217 + 6.60 0.000 Intergenic Intergenic 104171 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr13-3893 chr13 53309978 53310188 + 6.60 0.000 Intergenic Intergenic -158183 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr11-8906 chr11 16438675 16438885 + 6.60 0.000 intron (NM_001367872, intron 3 of 16) intron (NM_001367872, intron 3 of 16) -29924 NM_001145811 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chrX-4902 chrX 107823609 107823819 + 6.60 0.000 Intergenic L1MB2|LINE|L1 -2152 NM_052817 11043 Hs.12256 NM_012216 ENSG00000080561 MID2 FXY2|MRX101|RNF60|TRIM1 midline 2 protein-coding chr15-4004 chr15 56599004 56599214 + 6.60 0.000 Intergenic AluSq2|SINE|Alu -133972 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr14-2808 chr14 22644474 22644684 + 6.60 0.000 Intergenic Intergenic -9735 NM_001348233 79549 NM_001348233 ENSG00000255804 OR6J1 OR6J1P|OR6J2 olfactory receptor family 6 subfamily J member 1 (gene/pseudogene) protein-coding chr12-7770 chr12 95548293 95548503 + 6.60 0.000 promoter-TSS (NM_001278393) promoter-TSS (NM_001278393) -160 NM_001278393 84101 Hs.646421 NM_032147 ENSG00000136014 USP44 - ubiquitin specific peptidase 44 protein-coding chr2-7676 chr2 29975239 29975449 + 6.60 0.000 Intergenic AluY|SINE|Alu -53758 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr11-8444 chr11 112671702 112671912 + 6.60 0.000 Intergenic L1PREC2|LINE|L1 -116005 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr11-9416 chr11 58694298 58694508 + 6.60 0.000 Intergenic MLT2B4|LTR|ERVL 37540 NM_201648 10249 Hs.145384 NM_005838 ENSG00000149124 GLYAT ACGNAT|CAT|GAT glycine-N-acyltransferase protein-coding chr16-6279 chr16 31371116 31371326 + 6.60 0.000 intron (NM_000887, intron 15 of 29) intron (NM_000887, intron 15 of 29) 16045 NM_000887 3687 Hs.248472 NM_000887 ENSG00000140678 ITGAX CD11C|SLEB6 integrin subunit alpha X protein-coding chr2-14304 chr2 217002079 217002289 + 6.60 0.000 Intergenic L1M5|LINE|L1 131412 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr18-2699 chr18 60878722 60878932 + 6.60 0.000 Intergenic Intergenic -454603 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr2-10645 chr2 16807871 16808081 + 6.60 0.000 Intergenic L1ME1|LINE|L1 -142142 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr3-9241 chr3 38620564 38620774 + 6.60 0.000 intron (NM_001099404, intron 5 of 27) intron (NM_001099404, intron 5 of 27) 29003 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr13-3972 chr13 63468669 63468879 + 6.60 0.000 Intergenic AluJb|SINE|Alu -140680 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr20-3836 chr20 24586720 24586930 + 6.60 0.000 intron (NM_024893, intron 3 of 3) intron (NM_024893, intron 3 of 3) 116864 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr14-4419 chr14 31685140 31685350 + 6.60 0.000 intron (NR_120408, intron 6 of 9) intron (NR_120408, intron 6 of 9) -29324 NM_001201574 80224 Hs.288981 NM_025152 ENSG00000151413 NUBPL C14orf127|IND1|MC1DN21|huInd1 nucleotide binding protein like protein-coding chr2-10882 chr2 65898721 65898931 + 6.60 0.000 Intergenic L1M2|LINE|L1 459502 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr11-10085 chr11 85724057 85724267 + 6.60 0.000 exon (NM_206927, exon 8 of 20) exon (NM_206927, exon 8 of 20) -4812 NM_001162952 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr18-3351 chr18 57591688 57591898 + 6.60 0.000 Intergenic Intergenic -5091 NM_001371095 chrX-4914 chrX 109023390 109023600 + 6.60 0.000 Intergenic L1PA6|LINE|L1 286955 NR_110652 101928358 Hs.722300 NR_110652 ENSG00000237863 LOC101928358 - uncharacterized LOC101928358 ncRNA chr9-7693 chr9 72011647 72011857 + 6.60 0.000 Intergenic L1ME3A|LINE|L1 48853 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding chr5-7953 chr5 80703619 80703829 + 6.60 0.000 intron (NM_002439, intron 8 of 23) intron (NM_002439, intron 8 of 23) -48741 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr8-5527 chr8 66192399 66192609 + 6.60 0.000 non-coding (NR_039979, exon 1 of 3) non-coding (NR_039979, exon 1 of 3) 390 NR_039979 100505659 Hs.529729 NR_039979 ENSG00000253138 LINC00967 - long intergenic non-protein coding RNA 967 ncRNA chr1-11432 chr1 66136716 66136926 + 6.60 0.000 intron (NM_001037340, intron 1 of 14) L2b|LINE|L2 -86103 NR_123718 101927139 Hs.127908 NR_123718 ENSG00000227466 LOC101927139 - uncharacterized LOC101927139 ncRNA chr12-4046 chr12 49331690 49331900 + 6.60 0.000 TTS (NM_005480) TTS (NM_005480) 5393 NM_001008223 338761 Hs.380386 NM_001008223 ENSG00000186897 C1QL4 C1QTNF11|CTRP11 complement C1q like 4 protein-coding chr5-3569 chr5 65533984 65534194 + 6.60 0.000 intron (NM_001349369, intron 6 of 10) L1MEc|LINE|L1 29079 NM_001349368 64105 Hs.529778 NM_022145 ENSG00000123219 CENPK AF5alpha|CENP-K|FKSG14|P33|Solt centromere protein K protein-coding chr2-9548 chr2 239580967 239581177 + 6.60 0.000 Intergenic Intergenic 179324 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr1-6392 chr1 10649040 10649250 + 6.60 0.000 exon (NM_017766, exon 15 of 16) exon (NM_017766, exon 15 of 16) 147501 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr2-14199 chr2 207884277 207884487 + 6.60 0.000 intron (NM_001080475, intron 6 of 7) L1M4|LINE|L1 -114476 NM_003468 7855 Hs.17631 NM_003468 ENSG00000163251 FZD5 C2orf31|HFZ5 frizzled class receptor 5 protein-coding chr5-6165 chr5 51990071 51990281 + 6.60 0.000 Intergenic Intergenic -17855 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr13-1763 chr13 112990671 112990881 + 6.60 0.000 intron (NM_001320816, intron 1 of 29) L2a|LINE|L2 -10938 NM_024979 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr5-7672 chr5 54492513 54492723 + 6.60 0.000 Intergenic Intergenic -25141 NM_001145427 112574 Hs.432755 NM_052870 ENSG00000178996 SNX18 SH3PX2|SH3PXD3B|SNAG1 sorting nexin 18 protein-coding chr10-5513 chr10 83615431 83615641 + 6.60 0.000 Intergenic L1M3c|LINE|L1 61553 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr1-10010 chr1 85786302 85786512 + 6.60 0.000 non-coding (NR_146343, exon 48 of 60) non-coding (NR_146343, exon 48 of 60) -77974 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr17-5389 chr17 32267761 32267971 + 6.60 0.000 intron (NM_001363834, intron 1 of 6) intron (NM_001363834, intron 1 of 6) 1690 NM_001363834 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr17-4172 chr17 3697862 3698072 + 6.60 0.000 Intergenic L2c|LINE|L2 -1563 NR_037928 100533970 Hs.731607 NR_037928 ENSG00000257950 P2RX5-TAX1BP3 P2RX5|P2X5 P2RX5-TAX1BP3 readthrough (NMD candidate) ncRNA chr12-4192 chr12 95788706 95788916 + 6.60 0.000 intron (NM_001329701, intron 1 of 9) intron (NM_001329701, intron 1 of 9) 1384 NM_001329702 59277 Hs.201034 NM_021229 ENSG00000074527 NTN4 PRO3091 netrin 4 protein-coding chr13-3859 chr13 50807810 50808020 + 6.60 0.000 promoter-TSS (NR_046551) promoter-TSS (NR_046551) 60 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chrX-1827 chrX 102042788 102042998 + 6.60 0.000 Intergenic L1PREC2|LINE|L1 -82786 NM_080390 140597 Hs.401835 NM_080390 ENSG00000184905 TCEAL2 MY0876G05|WEX1|my048 transcription elongation factor A like 2 protein-coding chr5-4200 chr5 114995215 114995425 + 6.60 0.000 Intergenic HERV9-int|LTR|ERV1 174588 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr7-9274 chr7 124746585 124746795 + 6.60 0.000 exon (NM_005302, exon 2 of 2) exon (NM_005302, exon 2 of 2) 19102 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr8-6060 chr8 25261252 25261462 + 6.60 0.000 intron (NM_024940, intron 2 of 51) MARNA|DNA|TcMar-Mariner 76668 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr15-4908 chr15 77534234 77534444 + 6.60 0.000 TTS (NR_135692) TTS (NR_135692) 8744 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr22-2251 chr22 29401832 29402042 + 6.60 0.000 Intergenic MIRb|SINE|MIR -13354 NM_145730 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr1-5745 chr1 108819801 108820011 + 6.60 0.000 intron (NR_049760, intron 12 of 13) AluJr|SINE|Alu 37188 NM_152763 254268 Hs.729441 NM_152763 ENSG00000162641 AKNAD1 C1orf62 AKNA domain containing 1 protein-coding chr12-5676 chr12 97791483 97791693 + 6.60 0.000 Intergenic Intergenic -35071 NR_077240 643711 Hs.585557 NR_077240 ENSG00000257501 LOC643711 - platelet activating factor acetylhydrolase 1b catalytic subunit 2 pseudogene pseudo chr19-2247 chr19 49390532 49390742 + 6.60 0.000 intron (NM_144688, intron 1 of 19) Charlie15a|DNA|hAT-Charlie 2388 NM_144688 147872 Hs.662085 NM_144688 ENSG00000161609 CCDC155 KASH5 coiled-coil domain containing 155 protein-coding chr12-5333 chr12 115271941 115272151 + 6.60 0.000 Intergenic AluJb|SINE|Alu -587871 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr10-4559 chr10 103470610 103470820 + 6.60 0.000 Intergenic L2c|LINE|L2 8525 NM_001129742 119395 Hs.364624 NM_182494 ENSG00000183128 CALHM3 FAM26A|bA225H22.7 calcium homeostasis modulator 3 protein-coding chrX-3426 chrX 16172775 16172985 + 6.60 0.000 Intergenic Intergenic 5399 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - MAGE family member B17 protein-coding chr15-2744 chr15 101176691 101176901 + 6.60 0.000 3' UTR (NM_014918, exon 3 of 3) 3' UTR (NM_014918, exon 3 of 3) 75252 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr12-3501 chr12 124532407 124532617 + 6.60 0.000 intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 35100 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr1-14938 chr1 86228320 86228530 + 6.60 0.000 Intergenic AluSz|SINE|Alu -71441 NR_146340 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr17-7181 chr17 80782946 80783156 + 6.60 0.000 intron (NM_020761, intron 6 of 33) intron (NM_020761, intron 6 of 33) 22581 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr1-14742 chr1 67279304 67279514 + 6.60 0.000 Intergenic Intergenic -27955 NM_001258216 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chrX-1649 chrX 134410108 134410318 + 6.60 0.000 intron (NM_032458, intron 5 of 9) L1PA16|LINE|L1 36901 NM_032458 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr10-3889 chr10 59967633 59967843 + 6.60 0.000 Intergenic AluYb8|SINE|Alu -6825 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr6-5264 chr6 137503581 137503791 + 6.60 0.000 Intergenic THE1D|LTR|ERVL-MaLR -9292 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr4-5439 chr4 18934195 18934405 + 6.60 0.000 Intergenic Intergenic -912425 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr2-13563 chr2 154621152 154621362 + 6.60 0.000 Intergenic Intergenic -77324 NM_001260508 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr12-8251 chr12 124606553 124606763 + 6.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -39046 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr1-12378 chr1 5340188 5340398 + 6.60 0.000 Intergenic Intergenic 522448 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr3-7865 chr3 126199765 126199975 + 6.60 0.000 intron (NR_046383, intron 1 of 1) AluSq2|SINE|Alu -18684 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr2-7525 chr2 21217748 21217958 + 6.60 0.000 Intergenic Intergenic 93867 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr3-7949 chr3 159417005 159417215 + 6.60 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 134464 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr1-9639 chr1 46630428 46630638 + 6.60 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -13642 NM_201403 148932 Hs.632401 NM_145279 ENSG00000142961 MOB3C MOB1E|MOBKL2C MOB kinase activator 3C protein-coding chr12-6668 chr12 2864621 2864831 + 6.60 0.000 exon (NM_021953, exon 7 of 9) exon (NM_021953, exon 7 of 9) -7687 NM_001365175 101929469 Hs.634625 NM_001365174 ENSG00000283297 TEX52 - testis expressed 52 protein-coding chr6-7109 chr6 34731952 34732162 + 6.60 0.000 Intergenic MIRc|SINE|MIR -25037 NR_029472 6631 Hs.1063 NM_003093 ENSG00000124562 SNRPC U1C|Yhc1 small nuclear ribonucleoprotein polypeptide C protein-coding chr20-3626 chr20 7888842 7889052 + 6.60 0.000 intron (NM_017545, intron 5 of 7) MLT1H|LTR|ERVL-MaLR 51511 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr22-4088 chr22 43232938 43233148 + 6.60 0.000 intron (NM_173050, intron 7 of 21) intron (NM_173050, intron 7 of 21) 20369 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr6-4526 chr6 38805859 38806069 + 6.60 0.000 intron (NM_001371, intron 22 of 91) intron (NM_001371, intron 22 of 91) 90653 NM_001371 1769 Hs.520106 NM_001371 ENSG00000124721 DNAH8 ATPase|hdhc9 dynein axonemal heavy chain 8 protein-coding chr16-4690 chr16 80576799 80577009 + 6.60 0.000 Intergenic Intergenic -4096 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr1-14543 chr1 51927072 51927282 + 6.60 0.000 intron (NM_002867, intron 4 of 4) intron (NM_002867, intron 4 of 4) -48240 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr22-3748 chr22 26721285 26721495 + 6.60 0.000 intron (NR_110543, intron 2 of 5) intron (NR_110543, intron 2 of 5) 48547 NR_110543 102724827 Hs.642767 NR_110543 MIATNB - MIAT neighbor ncRNA chr9-3682 chr9 99850752 99850962 + 6.60 0.000 intron (NM_006981, intron 7 of 7) intron (NM_006981, intron 7 of 7) 28972 NM_173199 8013 Hs.279522 NM_006981 ENSG00000119508 NR4A3 CHN|CSMF|MINOR|NOR1|TEC nuclear receptor subfamily 4 group A member 3 protein-coding chr8-6715 chr8 86080289 86080499 + 6.60 0.000 Intergenic LTR16B|LTR|ERVL -10726 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr7-5761 chr7 75546766 75546976 + 6.60 0.000 intron (NM_001243198, intron 23 of 28) intron (NM_001243198, intron 23 of 28) -18748 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr10-3948 chr10 102409276 102409486 + 6.60 0.000 promoter-TSS (NR_073110) promoter-TSS (NR_073110) -104 NR_073110 5662 Hs.154658 NM_002779 ENSG00000059915 PSD EFA6|EFA6A|PSD1|TYL pleckstrin and Sec7 domain containing protein-coding chr14-3612 chr14 53867616 53867826 + 6.60 0.000 Intergenic AluSz|SINE|Alu 80763 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr3-9459 chr3 49639644 49639854 + 6.60 0.000 intron (NM_003458, intron 2 of 11) intron (NM_003458, intron 2 of 11) -34602 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr5-7151 chr5 2894466 2894676 + 6.60 0.000 Intergenic Intergenic -23283 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA chr6-6879 chr6 11294774 11294984 + 6.60 0.000 intron (NM_001142393, intron 2 of 7) THE1B|LTR|ERVL-MaLR -62197 NM_001271033 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr10-8822 chr10 109221968 109222178 + 6.60 0.000 Intergenic Intergenic 701173 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr12-3129 chr12 32852797 32853007 + 6.60 0.000 intron (NM_001005242, intron 4 of 12) AluSx3|SINE|Alu 43944 NM_004572 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr9-5046 chr9 31577667 31577877 + 6.60 0.000 Intergenic Intergenic -196282 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr1-9196 chr1 21815288 21815498 + 6.60 0.000 intron (NM_001013693, intron 2 of 4) intron (NM_001013693, intron 2 of 4) 3128 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr12-3509 chr12 125065730 125065940 + 6.60 0.000 intron (NM_001319839, intron 1 of 16) intron (NM_001319839, intron 1 of 16) 400 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr20-4409 chr20 59162521 59162731 + 6.60 0.000 Intergenic L1PA17|LINE|L1 -28394 NM_178457 128611 Hs.473204 NM_178457 ENSG00000124203 ZNF831 C20orf174 zinc finger protein 831 protein-coding chr8-5302 chr8 142583549 142583759 + 6.60 0.000 Intergenic Intergenic 30825 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr2-13486 chr2 147885489 147885699 + 6.60 0.000 intron (NM_001278579, intron 2 of 11) Kanga2_a|DNA|TcMar-Tc2 40565 NM_001616 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr13-1285 chr13 24973661 24973871 + 6.60 0.000 Intergenic L1PA16|LINE|L1 -5297 NR_026730 646405 Hs.620592 NM_001126062 TPTE2P1 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 pseudo chr8-2989 chr8 100495445 100495655 + 6.60 0.000 Intergenic Intergenic 64209 NM_001270378 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr2-5410 chr2 111315575 111315785 + 6.60 0.000 intron (NR_136165, intron 2 of 3) intron (NR_136165, intron 2 of 3) 5406 NR_039636 100616341 NR_039636 ENSG00000266139 MIR4435-2 mir-4435-2 microRNA 4435-2 ncRNA chr2-12446 chr2 58822132 58822342 + 6.60 0.000 intron (NR_033873, intron 2 of 13) L1MA3|LINE|L1 301484 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr16-2960 chr16 8936639 8936849 + 6.60 0.000 promoter-TSS (NM_001286457) promoter-TSS (NM_001286457) -105 NM_001286457 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chr20-4227 chr20 47907149 47907359 + 6.60 0.000 Intergenic Intergenic -75972 NR_109942 101060004 Hs.129970 NR_109942 LINC01523 - long intergenic non-protein coding RNA 1523 ncRNA chr1-16104 chr1 203907801 203908011 + 6.60 0.000 Intergenic AluJo|SINE|Alu 46059 NM_001328638 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding chr3-9785 chr3 71795911 71796121 + 6.60 0.000 Intergenic Intergenic -10868 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chrX-5104 chrX 128195614 128195824 + 6.60 0.000 Intergenic Intergenic -143316 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr20-2943 chr20 12241226 12241436 + 6.60 0.000 Intergenic Intergenic 323438 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr2-14491 chr2 226310065 226310275 + 6.60 0.000 Intergenic Intergenic 167376 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr22-3305 chr22 17819059 17819269 + 6.60 0.000 intron (NM_015241, intron 25 of 31) intron (NM_015241, intron 25 of 31) 41874 NR_103718 200298 Hs.517397 NR_103718 ENSG00000269220 LINC00528 C22orf37 long intergenic non-protein coding RNA 528 ncRNA chr5-8351 chr5 119930689 119930899 + 6.60 0.000 Intergenic Intergenic 301235 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr16-6095 chr16 12499433 12499643 + 6.60 0.000 intron (NM_032167, intron 19 of 20) intron (NM_032167, intron 19 of 20) -220783 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr17-3179 chr17 79275050 79275260 + 6.60 0.000 intron (NM_001082575, intron 3 of 14) (TC)n|Simple_repeat|Simple_repeat 200218 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr5-3919 chr5 172225033 172225243 + 6.60 0.000 intron (NM_152277, intron 2 of 2) intron (NM_152277, intron 2 of 2) 30966 NM_001171183 285588 Hs.716824 NM_001171183 ENSG00000214360 EFCAB9 - EF-hand calcium binding domain 9 protein-coding chr1-7592 chr1 229221717 229221927 + 6.60 0.000 Intergenic Intergenic -47021 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr17-3848 chr17 44210440 44210650 + 6.60 0.000 intron (NM_001076683, intron 12 of 19) CpG -2706 NR_106840 102465469 NR_106840 ENSG00000275107 MIR6782 hsa-mir-6782 microRNA 6782 ncRNA chr10-5479 chr10 79979631 79979841 + 6.60 0.000 Intergenic L1M1|LINE|L1 -30631 NM_003019 6441 Hs.253495 NM_003019 ENSG00000133661 SFTPD COLEC7|PSP-D|SFTP4|SP-D surfactant protein D protein-coding chr1-10386 chr1 156330776 156330986 + 6.60 0.000 intron (NM_001008800, intron 3 of 11) AluSx1|SINE|Alu -6433 NM_144627 128229 Hs.534539 NM_144627 ENSG00000163467 TSACC C1orf182|SIP|SSTK-IP TSSK6 activating cochaperone protein-coding chr6-5871 chr6 39064212 39064422 + 6.60 0.000 intron (NR_136563, intron 3 of 13) intron (NR_136563, intron 3 of 13) -9997 NR_162114 113218508 NR_162114 MIR9983 - microRNA 9983 ncRNA chrX-3761 chrX 129779044 129779254 + 6.60 0.000 promoter-TSS (NM_018990) promoter-TSS (NM_018990) -800 NM_018990 54440 Hs.61469 NM_018990 ENSG00000122122 SASH3 753P9|CXorf9|HACS2|SH3D6C|SLY SAM and SH3 domain containing 3 protein-coding chr6-7132 chr6 35757756 35757966 + 6.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR -18733 NR_104469 389383 Hs.259563 NM_207409 ENSG00000196748 CLPSL2 AAAL3045|C6orf126|UNQ3045|dJ510O8.5 colipase like 2 protein-coding chr4-6110 chr4 16502092 16502302 + 6.60 0.000 3' UTR (NM_001290, exon 8 of 8) 3' UTR (NM_001290, exon 8 of 8) 275534 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr3-9261 chr3 39796432 39796642 + 6.60 0.000 Intergenic L2a|LINE|L2 -12377 NM_001284423 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr7-5771 chr7 76117584 76117794 + 6.60 0.000 Intergenic MIR3|SINE|MIR -8927 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr9-6011 chr9 135409437 135409647 + 6.60 0.000 Intergenic Intergenic 62707 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr2-8802 chr2 168237472 168237682 + 6.60 0.000 intron (NM_013233, intron 1 of 17) L1PA4|LINE|L1 10018 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr8-5742 chr8 139624534 139624744 + 6.60 0.000 intron (NR_104210, intron 1 of 3) (CCCAG)n|Simple_repeat|Simple_repeat 78484 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr18-1811 chr18 13523413 13523623 + 6.60 0.000 intron (NM_181482, intron 4 of 5) MLT1E1A|LTR|ERVL-MaLR 63571 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chrX-3627 chrX 88349771 88349981 + 6.60 0.000 Intergenic L1PB3|LINE|L1 -397349 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr16-3805 chr16 49487598 49487808 + 6.60 0.000 3' UTR (NM_001330533, exon 6 of 6) 3' UTR (NM_001330533, exon 6 of 6) 30882 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr20-2374 chr20 17491089 17491299 + 6.60 0.000 Intergenic Intergenic 40185 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr11-7794 chr11 96881055 96881265 + 6.60 0.000 Intergenic LTR80A|LTR|ERVL 372735 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr10-8166 chr10 71151533 71151743 + 6.60 0.000 Intergenic Intergenic -60932 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr16-5102 chr16 86984457 86984667 + 6.60 0.000 Intergenic Intergenic -73222 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chrX-2920 chrX 152397031 152397241 + 6.60 0.000 intron (NM_000808, intron 1 of 9) intron (NM_000808, intron 1 of 9) -2644 NR_029522 406898 NR_029522 ENSG00000207818 MIR105-2 MIRN105-2|mir-105-2 microRNA 105-2 ncRNA chr14-2786 chr14 20705090 20705300 + 6.60 0.000 Intergenic HERVH-int|LTR|ERV1 16431 NM_194431 6038 Hs.283749 NM_002937 ENSG00000258818 RNASE4 RAB1|RNS4 ribonuclease A family member 4 protein-coding chr15-2017 chr15 48385693 48385903 + 6.60 0.000 Intergenic Intergenic 53601 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr8-6225 chr8 38003884 38004094 + 6.60 0.000 Intergenic LTR7C|LTR|ERV1 -26545 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr6-6424 chr6 92667878 92668088 + 6.60 0.000 Intergenic Intergenic 751576 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr4-8014 chr4 117260880 117261090 + 6.60 0.000 Intergenic MER65-int|LTR|ERV1 99654 NR_147151 105377389 Hs.129401 NR_147151 ENSG00000224932 LINC02262 - long intergenic non-protein coding RNA 2262 ncRNA chr1-16157 chr1 205908750 205908960 + 6.60 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 18835 NR_046098 284581 NR_046097 LOC284581 - uncharacterized LOC284581 ncRNA chr12-6712 chr12 4981655 4981865 + 6.60 0.000 Intergenic MER77B|LTR|ERVL -62119 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr11-10083 chr11 85522526 85522736 + 6.60 0.000 intron (NM_001142699, intron 3 of 27) THE1C-int|LTR|ERVL-MaLR 104639 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr16-5838 chr16 939994 940204 + 6.60 0.000 intron (NM_001352017, intron 2 of 11) MLT1D|LTR|ERVL-MaLR 19066 NR_110945 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr14-2380 chr14 41253113 41253323 + 6.60 0.000 Intergenic MER52A|LTR|ERV1 298507 NR_109758 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr9-7738 chr9 74705847 74706057 + 6.60 0.000 Intergenic AluSx1|SINE|Alu 90418 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr5-5848 chr5 179981986 179982196 + 6.60 0.000 intron (NM_001280801, intron 3 of 7) L1ME1|LINE|L1 33306 NR_029885 442908 NR_029885 ENSG00000198995 MIR340 MIRN340|hsa-mir-340|mir-340 microRNA 340 ncRNA chr2-11811 chr2 17160023 17160233 + 6.60 0.000 Intergenic LTR78B|LTR|ERV1 358312 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr1-6734 chr1 66073595 66073805 + 6.60 0.000 intron (NM_001037340, intron 1 of 14) L3b|LINE|CR1 -22982 NR_123718 101927139 Hs.127908 NR_123718 ENSG00000227466 LOC101927139 - uncharacterized LOC101927139 ncRNA chrX-4401 chrX 52861267 52861477 + 6.60 0.000 Intergenic MER21B|LTR|ERVL 5929 NM_130776 170626 Hs.43879 NM_130776 ENSG00000171402 XAGE3 CT12.3a|CT12.3b|GAGED4|PLAC6|XAGE-3|pp9012 X antigen family member 3 protein-coding chr6-4304 chr6 15079729 15079939 + 6.60 0.000 Intergenic LTR88b|LTR|Gypsy? -166235 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr7-5457 chr7 39895138 39895348 + 6.60 0.000 Intergenic Intergenic 54176 NR_158201 112267983 Hs.587424 NR_158201 LOC112267983 - uncharacterized LOC112267983 ncRNA chr14-3360 chr14 91337731 91337941 + 6.60 0.000 intron (NM_001080414, intron 10 of 29) intron (NM_001080414, intron 10 of 29) 79984 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr17-4700 chr17 29124890 29125100 + 6.60 0.000 intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) 15394 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr12-5936 chr12 75197097 75197307 + 6.60 0.000 intron (NM_001260499, intron 2 of 3) intron (NM_001260499, intron 2 of 3) 12546 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding chr11-5065 chr11 110059877 110060087 + 6.60 0.000 Intergenic Intergenic -33410 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr11-8034 chr11 18095675 18095885 + 6.60 0.000 intron (NM_138421, intron 3 of 11) intron (NM_138421, intron 3 of 11) 10302 NM_138421 113174 Hs.591998 NM_138421 ENSG00000166788 SAAL1 SPACIA1 serum amyloid A like 1 protein-coding chr9-3352 chr9 112050548 112050758 + 6.60 0.000 intron (NM_001282640, intron 15 of 17) intron (NM_001282640, intron 15 of 17) 118553 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr22-3673 chr22 23193061 23193271 + 6.60 0.000 intron (NM_004327, intron 1 of 22) intron (NM_004327, intron 1 of 22) 12657 NM_021574 613 Hs.517461 NM_004327 ENSG00000186716 BCR ALL|BCR1|CML|D22S11|D22S662|PHL BCR activator of RhoGEF and GTPase protein-coding chr12-6728 chr12 5616969 5617179 + 6.60 0.000 intron (NM_001278596, intron 17 of 25) intron (NM_001278596, intron 17 of 25) 122942 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr1-8544 chr1 160373470 160373680 + 6.60 0.000 TTS (NM_005598) TTS (NM_005598) 6504 NM_005598 4807 Hs.30956 NM_005598 ENSG00000171786 NHLH1 HEN1|NSCL|NSCL1|bHLHa35 nescient helix-loop-helix 1 protein-coding chr4-3737 chr4 78229588 78229798 + 6.60 0.000 intron (NM_001166133, intron 2 of 41) intron (NM_001166133, intron 2 of 41) -59292 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr21-1244 chr21 45926426 45926636 + 6.60 0.000 intron (NR_145493, intron 10 of 12) intron (NR_145493, intron 10 of 12) -46439 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr4-5499 chr4 81687533 81687743 + 6.60 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -215731 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr18-3252 chr18 49859998 49860208 + 6.60 0.000 intron (NM_001080467, intron 29 of 39) intron (NM_001080467, intron 29 of 39) 46080 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr3-9004 chr3 18306873 18307083 + 6.60 0.000 Intergenic Intergenic 118361 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr11-7427 chr11 112332294 112332504 + 6.60 0.000 intron (NR_126004, intron 2 of 3) intron (NR_126004, intron 2 of 3) 61650 NR_126004 283140 Hs.651827 NR_126004 ENSG00000250303 LINC02762 - long intergenic non-protein coding RNA 2762 ncRNA chr14-3236 chr14 75481227 75481437 + 6.60 0.000 Intergenic L1MC2|LINE|L1 -41137 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr12-6123 chr12 131784361 131784571 + 6.60 0.000 intron (NM_004592, intron 14 of 17) intron (NM_004592, intron 14 of 17) -43927 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr20-989 chr20 53594165 53594375 + 6.60 0.000 Intergenic CpG -11173 NM_006526 7764 Hs.155040 NM_006526 ENSG00000171940 ZNF217 ZABC1 zinc finger protein 217 protein-coding chrX-1747 chrX 45517324 45517534 + 6.60 0.000 intron (NR_104644, intron 2 of 3) intron (NR_104644, intron 2 of 3) 12041 NR_104645 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA chr5-3554 chr5 42641543 42641753 + 6.60 0.000 intron (NM_001242403, intron 3 of 9) intron (NM_001242403, intron 3 of 9) 75784 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr1-13913 chr1 22326280 22326490 + 6.60 0.000 Intergenic Intergenic 60146 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr18-3369 chr18 58644569 58644779 + 6.60 0.000 Intergenic HERVH-int|LTR|ERV1 -15583 NM_052947 115701 Hs.628152 NM_052947 ENSG00000198796 ALPK2 HAK alpha kinase 2 protein-coding chrX-4997 chrX 118047694 118047904 + 6.60 0.000 intron (NM_001168301, intron 1 of 7) intron (NM_001168301, intron 1 of 7) -62386 NM_001168299 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr11-8608 chr11 1792698 1792908 + 6.60 0.000 Intergenic Intergenic -28876 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr15-2957 chr15 49580385 49580595 + 6.60 0.000 intron (NM_001330293, intron 5 of 10) L1PA13|LINE|L1 40328 NM_152647 196951 Hs.712959 NM_152647 ENSG00000166262 FAM227B C15orf33 family with sequence similarity 227 member B protein-coding chr2-4463 chr2 227759846 227760056 + 6.60 0.000 Intergenic Intergenic -41923 NM_025243 80704 Hs.221597 NM_025243 ENSG00000135917 SLC19A3 BBGD|THMD2|THTR2 solute carrier family 19 member 3 protein-coding chr1-15330 chr1 119587364 119587574 + 6.60 0.000 Intergenic Intergenic 11822 NR_036540 644242 Hs.515383 NR_036540 ENSG00000260941 LINC00622 - long intergenic non-protein coding RNA 622 ncRNA chr18-2723 chr18 69538579 69538789 + 6.60 0.000 intron (NM_152721, intron 1 of 7) intron (NM_152721, intron 1 of 7) 68753 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr20-4081 chr20 39290975 39291185 + 6.60 0.000 Intergenic MER21C|LTR|ERVL -66332 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr8-3985 chr8 53070147 53070357 + 6.60 0.000 Intergenic Intergenic 130344 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr20-2192 chr20 50752276 50752486 + 6.60 0.000 3' UTR (NM_032521, exon 3 of 3) 3' UTR (NM_032521, exon 3 of 3) 20801 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr2-6912 chr2 105868724 105868934 + 6.60 0.000 intron (NM_001004722, intron 3 of 3) intron (NM_001004722, intron 3 of 3) 16982 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr2-9482 chr2 235934301 235934511 + 6.60 0.000 intron (NM_001037131, intron 12 of 17) intron (NM_001037131, intron 12 of 17) 233980 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr3-8784 chr3 5110427 5110637 + 6.60 0.000 Intergenic Intergenic -11760 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr8-5815 chr8 3865437 3865647 + 6.60 0.000 intron (NM_033225, intron 5 of 69) intron (NM_033225, intron 5 of 69) 1129372 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr9-6841 chr9 69484815 69485025 + 6.60 0.000 intron (NM_001163, intron 2 of 12) intron (NM_001163, intron 2 of 12) 155595 NM_004816 9413 Hs.118003 NM_004816 ENSG00000135063 FAM189A2 C9orf61|X123 family with sequence similarity 189 member A2 protein-coding chr15-3214 chr15 73282829 73283039 + 6.60 0.000 intron (NM_002499, intron 22 of 28) intron (NM_002499, intron 22 of 28) -16976 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chrX-1140 chrX 35466798 35467008 + 6.60 0.000 Intergenic Intergenic -331439 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr2-4702 chr2 226791523 226791733 + 6.60 0.000 intron (NM_005544, intron 1 of 1) CpG 7162 NM_005544 3667 Hs.471508 NM_005544 ENSG00000169047 IRS1 HIRS-1 insulin receptor substrate 1 protein-coding chr2-13187 chr2 120978635 120978845 + 6.60 0.000 intron (NM_005270, intron 10 of 13) intron (NM_005270, intron 10 of 13) 186459 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr19-4997 chr19 47005263 47005473 + 6.60 0.000 TTS (NM_004491) TTS (NM_004491) -14469 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr19-6485 chr19 17607605 17607815 + 6.60 0.000 intron (NM_001080421, intron 41 of 41) AluJo|SINE|Alu 52061 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr4-2936 chr4 95352174 95352384 + 6.60 0.000 intron (NM_003728, intron 1 of 15) L2a|LINE|L2 196694 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr9-7008 chr9 115049445 115049655 + 6.60 0.000 intron (NM_002160, intron 15 of 27) intron (NM_002160, intron 15 of 27) 68607 NM_002160 3371 Hs.143250 NM_002160 ENSG00000041982 TNC 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C tenascin C protein-coding chr2-5995 chr2 73852054 73852264 + 6.60 0.000 intron (NR_148670, intron 8 of 12) L2c|LINE|L2 23192 NM_001353974 10617 Hs.469018 NM_006463 ENSG00000124356 STAMBP AMSH|MICCAP STAM binding protein protein-coding chr19-6301 chr19 8543536 8543746 + 6.60 0.000 intron (NM_012335, intron 14 of 27) (GGTGGT)n|Simple_repeat|Simple_repeat -29474 NM_032370 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr12-6840 chr12 14320737 14320947 + 6.60 0.000 Intergenic LTR12C|LTR|ERV1 -44790 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr20-3426 chr20 45321542 45321752 + 6.60 0.000 Intergenic AluSz|SINE|Alu -13118 NM_003833 8785 Hs.278489 NM_003833 ENSG00000124159 MATN4 - matrilin 4 protein-coding chr9-6832 chr9 38128284 38128494 + 6.60 0.000 Intergenic Intergenic -59162 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr9-7755 chr9 75954720 75954930 + 6.60 0.000 intron (NR_120409, intron 2 of 19) intron (NR_120409, intron 2 of 19) 64152 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chrX-5365 chrX 150195517 150195727 + 6.60 0.000 Intergenic L3|LINE|CR1 -32382 NR_031748 100313839 NR_031748 ENSG00000252454 MIR2114 - microRNA 2114 ncRNA chr4-4307 chr4 28576739 28576949 + 6.60 0.000 Intergenic Intergenic -242738 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr12-6575 chr12 121781617 121781827 + 6.60 0.000 3' UTR (NM_001080825, exon 12 of 12) 3' UTR (NM_001080825, exon 12 of 12) 11966 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr9-3927 chr9 135129431 135129641 + 6.60 0.000 Intergenic Intergenic 41868 NM_001282611 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr11-9705 chr11 67762731 67762941 + 6.60 0.000 Intergenic HERVH-int|LTR|ERV1 42500 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr1-15452 chr1 154192346 154192556 + 6.60 0.000 promoter-TSS (NM_001364680) promoter-TSS (NM_001364680) -351 NM_001364680 7170 Hs.535581 NM_152263 ENSG00000143549 TPM3 CAPM1|CFTD|HEL-189|HEL-S-82p|NEM1|OK/SW-cl.5|TM-5|TM3|TM30|TM30nm|TM5|TPM3nu|TPMsk3|TRK|hscp30 tropomyosin 3 protein-coding chr13-3599 chr13 28837308 28837518 + 6.60 0.000 intron (NM_001366651, intron 1 of 14) intron (NM_001366651, intron 1 of 14) 17074 NM_001366651 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr19-4824 chr19 35901373 35901583 + 6.60 0.000 promoter-TSS (NM_139239) promoter-TSS (NM_139239) -640 NM_001365706 84807 Hs.466531 NM_032721 ENSG00000167604 NFKBID IkBNS|IkappaBNS|TA-NFKBH NFKB inhibitor delta protein-coding chr1-5313 chr1 222090118 222090328 + 6.60 0.000 Intergenic Intergenic -111703 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr6-7554 chr6 70888547 70888757 + 6.60 0.000 intron (NM_080742, intron 2 of 3) intron (NM_080742, intron 2 of 3) 68408 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr8-7147 chr8 121807720 121807930 + 6.60 0.000 Intergenic L2a|LINE|L2 -166385 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr8-4443 chr8 112193780 112193990 + 6.60 0.000 Intergenic LTR16B1|LTR|ERVL -449608 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr4-7645 chr4 84223138 84223348 + 6.60 0.000 intron (NR_125909, intron 5 of 8) THE1D|LTR|ERVL-MaLR 75926 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr6-5650 chr6 79627987 79628197 + 6.60 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -3237 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chrX-5105 chrX 128271407 128271617 + 6.60 0.000 Intergenic L1PA17|LINE|L1 -219109 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr4-5180 chr4 158296510 158296720 + 6.60 0.000 Intergenic HERVK22-int|LTR|ERVK 86129 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr4-7060 chr4 30139762 30139972 + 6.60 0.000 Intergenic Intergenic -580502 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr3-11021 chr3 181506477 181506687 + 6.60 0.000 intron (NR_075091, intron 3 of 7) MLT1K|LTR|ERVL-MaLR -64096 NR_125407 102724604 Hs.570524 NR_125407 ENSG00000241231 LOC102724604 - uncharacterized LOC102724604 ncRNA chr8-6582 chr8 70922850 70923060 + 6.60 0.000 Intergenic Intergenic 253616 NM_001287259 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr8-6492 chr8 63928088 63928298 + 6.60 0.000 intron (NR_125826, intron 4 of 4) MIR|SINE|MIR 158763 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr1-14487 chr1 48537759 48537969 + 6.60 0.000 intron (NM_001323574, intron 12 of 13) intron (NM_001323574, intron 12 of 13) -65656 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr3-5715 chr3 15758370 15758580 + 6.60 0.000 intron (NM_001349279, intron 4 of 28) MLT1B|LTR|ERVL-MaLR -1928 NM_001195099 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr1-7814 chr1 55118314 55118524 + 6.60 0.000 intron (NM_015306, intron 38 of 67) L1MB3|LINE|L1 78197 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr12-4889 chr12 64944688 64944898 + 6.60 0.000 intron (NR_146276, intron 3 of 3) MLT1F2|LTR|ERVL-MaLR 47498 NR_146276 109729131 Hs.577553 NR_146276 ENSG00000248995 LINC02231 - long intergenic non-protein coding RNA 2231 ncRNA chr2-13464 chr2 146389185 146389395 + 6.60 0.000 Intergenic L1M5|LINE|L1 -197767 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr4-8471 chr4 157345606 157345816 + 6.60 0.000 intron (NM_001083620, intron 12 of 15) L3b|LINE|CR1 124983 NM_000826 2891 Hs.32763 NM_000826 ENSG00000120251 GRIA2 GLUR2|GLURB|GluA2|GluR-K2|HBGR2 glutamate ionotropic receptor AMPA type subunit 2 protein-coding chr3-4888 chr3 178539667 178539877 + 6.60 0.000 intron (NR_126560, intron 5 of 7) (GT)n|Simple_repeat|Simple_repeat 3336 NM_181361 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chrX-2799 chrX 133844185 133844395 + 6.60 0.000 intron (NM_001164619, intron 1 of 6) L1MA9|LINE|L1 -53153 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr7-4025 chr7 151886359 151886569 + 6.60 0.000 Intergenic L2a|LINE|L2 -9349 NM_016203 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr3-10255 chr3 123540557 123540767 + 6.60 0.000 intron (NM_001329786, intron 2 of 5) intron (NM_001329786, intron 2 of 5) 43955 NM_001329787 201562 Hs.705480 NM_198402 ENSG00000206527 HACD2 PTPLB 3-hydroxyacyl-CoA dehydratase 2 protein-coding chr8-5574 chr8 83445104 83445314 + 6.60 0.000 Intergenic AluSp|SINE|Alu 41451 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr14-5253 chr14 99617937 99618147 + 6.60 0.000 intron (NM_001329411, intron 1 of 8) intron (NM_001329411, intron 1 of 8) 13504 NM_001329411 84439 Hs.131714 NM_032425 ENSG00000182218 HHIPL1 KIAA1822|UNQ9245 HHIP like 1 protein-coding chr1-9251 chr1 24158596 24158806 + 6.60 0.000 intron (NM_173065, intron 5 of 5) intron (NM_173065, intron 5 of 5) -15561 NM_021258 58985 Hs.110915 NM_021258 ENSG00000142677 IL22RA1 CRF2-9|IL22R|IL22R1 interleukin 22 receptor subunit alpha 1 protein-coding chrX-3696 chrX 110423314 110423524 + 6.60 0.000 intron (NM_020769, intron 1 of 3) GA-rich|Low_complexity|Low_complexity 4362 NM_020769 57529 Hs.201071 NM_020769 ENSG00000243978 RTL9 MAR9|MART9|RGAG1|SIRH10 retrotransposon Gag like 9 protein-coding chr17-4691 chr17 28692220 28692430 + 6.60 0.000 intron (NM_003170, intron 27 of 36) AluY|SINE|Alu 17779 NM_001366303 147011 Hs.207471 NM_152465 ENSG00000167525 PROCA1 - protein interacting with cyclin A1 protein-coding chr10-5807 chr10 109591241 109591451 + 6.60 0.000 Intergenic AluJo|SINE|Alu 331900 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr19-6612 chr19 29259413 29259623 + 6.60 0.000 Intergenic Intergenic -46367 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr2-10941 chr2 78875851 78876061 + 6.60 0.000 Intergenic MIR|SINE|MIR -149746 NM_198448 130120 Hs.447084 NM_198448 ENSG00000143954 REG3G LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429 regenerating family member 3 gamma protein-coding chr1-10444 chr1 160045636 160045846 + 6.60 0.000 intron (NM_002241, intron 1 of 1) L3|LINE|CR1 -13751 NM_145167 93183 Hs.552810 NM_145167 ENSG00000143315 PIGM GPI-MT-I phosphatidylinositol glycan anchor biosynthesis class M protein-coding chr19-2023 chr19 58033879 58034089 + 6.60 0.000 promoter-TSS (NM_182572) promoter-TSS (NM_182572) -41 NM_182572 284312 Hs.643437 NM_182572 ENSG00000152467 ZSCAN1 MZF-1|ZNF915 zinc finger and SCAN domain containing 1 protein-coding chr3-8719 chr3 191507968 191508178 + 6.60 0.000 intron (NR_120606, intron 1 of 6) intron (NR_120606, intron 1 of 6) 46910 NM_001083308 152138 Hs.690618 NM_001083308 ENSG00000253548 PYDC2 POP2|cPOP2 pyrin domain containing 2 protein-coding chr4-6384 chr4 111776003 111776213 + 6.60 0.000 Intergenic Intergenic -369346 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr1-6295 chr1 1384476 1384686 + 6.60 0.000 Intergenic AluJb|SINE|Alu -9374 NM_017900 54998 Hs.632515 NM_017900 ENSG00000175756 AURKAIP1 AIP|AKIP|MRP-S38 aurora kinase A interacting protein 1 protein-coding chr6-6436 chr6 98747156 98747366 + 6.60 0.000 Intergenic UCON105|Unknown|Unknown 84439 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr11-7563 chr11 24861647 24861857 + 6.60 0.000 intron (NM_001252010, intron 5 of 9) LTR22A|LTR|ERVK 364699 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr6-6418 chr6 88013810 88014020 + 6.60 0.000 Intergenic HERVL40-int|LTR|ERVL -33926 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr16-4393 chr16 49999432 49999642 + 6.60 0.000 Intergenic L2c|LINE|L2 -25669 NR_104042 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding chr1-11884 chr1 44432086 44432296 + 6.60 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 8190 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr1-7921 chr1 160455455 160455665 + 6.60 0.000 Intergenic AluSq2|SINE|Alu 54996 NM_020335 57216 Hs.99477 NM_020335 ENSG00000162738 VANGL2 LPP1|LTAP|STB1|STBM|STBM1 VANGL planar cell polarity protein 2 protein-coding chr7-9451 chr7 134710601 134710811 + 6.60 0.000 Intergenic Intergenic 63853 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr17-5134 chr17 7797683 7797893 + 6.60 0.000 exon (NM_020877, exon 53 of 86) exon (NM_020877, exon 53 of 86) -42118 NM_001348716 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr11-8692 chr11 4911402 4911612 + 6.60 0.000 Intergenic Intergenic 4137 NM_001004749 119687 Hs.553560 NM_001004749 ENSG00000176895 OR51A7 OR11-27 olfactory receptor family 51 subfamily A member 7 protein-coding chr22-4120 chr22 44097048 44097258 + 6.60 0.000 intron (NM_001243386, intron 2 of 11) intron (NM_001243386, intron 2 of 11) 28036 NM_001243385 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chrX-1290 chrX 115533531 115533741 + 6.60 0.000 intron (NR_110383, intron 2 of 4) intron (NR_110383, intron 2 of 4) -27538 NM_001282337 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr2-14253 chr2 213063273 213063483 + 6.60 0.000 intron (NM_001371277, intron 3 of 6) MIRc|SINE|MIR 87059 NM_016260 22807 Hs.604950 NM_016260 ENSG00000030419 IKZF2 ANF1A2|HELIOS|ZNF1A2|ZNFN1A2 IKAROS family zinc finger 2 protein-coding chr7-6252 chr7 134729570 134729780 + 6.60 0.000 Intergenic Intergenic -49959 NM_033157 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr7-3062 chr7 140451674 140451884 + 6.60 0.000 Intergenic Intergenic 27726 NM_013446 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chr20-1020 chr20 18702778 18702988 + 6.60 0.000 intron (NM_080820, intron 4 of 5) intron (NM_080820, intron 4 of 5) -4175 NR_109955 101929526 Hs.639402 NR_109955 ENSG00000233993 LOC101929526 - uncharacterized LOC101929526 ncRNA chr1-9840 chr1 63133343 63133553 + 6.60 0.000 Intergenic Intergenic -120977 NR_146606 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr8-1659 chr8 22108055 22108265 + 6.60 0.000 exon (NM_024815, exon 2 of 3) exon (NM_024815, exon 2 of 3) 1259 NM_024815 79873 Hs.527101 NM_024815 ENSG00000275074 NUDT18 MTH3 nudix hydrolase 18 protein-coding chr12-6006 chr12 103923702 103923912 + 6.60 0.000 intron (NR_027249, intron 1 of 15) intron (NR_027249, intron 1 of 15) 6404 NR_027249 253724 Hs.506549 NR_027249 ENSG00000214198 TTC41P GNN|GNNP tetratricopeptide repeat domain 41, pseudogene pseudo chrX-2038 chrX 17134251 17134461 + 6.60 0.000 intron (NM_001080975, intron 15 of 17) intron (NM_001080975, intron 15 of 17) 187698 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr7-4184 chr7 126452494 126452704 + 6.60 0.000 intron (NM_001371085, intron 9 of 10) intron (NM_001371085, intron 9 of 10) 605585 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr10-4516 chr10 91296515 91296725 + 6.60 0.000 Intergenic Intergenic 75957 NM_032373 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr6-6517 chr6 125606673 125606883 + 6.60 0.000 Intergenic AluSx1|SINE|Alu -67575 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr10-7164 chr10 103518995 103519205 + 6.60 0.000 intron (NM_004210, intron 1 of 5) AluSx1|SINE|Alu -1658 NR_120676 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr13-2941 chr13 36030942 36031152 + 6.60 0.000 intron (NM_001330071, intron 3 of 16) intron (NM_001330071, intron 3 of 16) 100335 NM_001330071 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr15-3325 chr15 79697243 79697453 + 6.60 0.000 Intergenic L2b|LINE|L2 199649 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr2-14424 chr2 221914258 221914468 + 6.60 0.000 Intergenic Intergenic -340161 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-8027 chr3 193634699 193634909 + 6.60 0.000 intron (NM_130831, intron 5 of 27) MIR|SINE|MIR -7472 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA chr15-4643 chr15 63659251 63659461 + 6.60 0.000 intron (NM_003922, intron 47 of 77) AluJr4|SINE|Alu -58529 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr8-3504 chr8 108789748 108789958 + 6.60 0.000 Intergenic Charlie17a|DNA|hAT-Charlie -2259 NR_136411 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr2-7410 chr2 9249663 9249873 + 6.60 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 42956 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr1-15038 chr1 93756851 93757061 + 6.60 0.000 intron (NR_148965, intron 1 of 1) intron (NR_148965, intron 1 of 1) 18427 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr11-6891 chr11 104257054 104257264 + 6.60 0.000 Intergenic Intergenic -93012 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr2-12041 chr2 29960855 29961065 + 6.60 0.000 Intergenic L1P4|LINE|L1 -39374 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr8-6673 chr8 80738570 80738780 + 6.60 0.000 intron (NM_001033723, intron 2 of 8) intron (NM_001033723, intron 2 of 8) 135793 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr3-10508 chr3 136943478 136943688 + 6.60 0.000 intron (NM_001190796, intron 1 of 2) intron (NM_001190796, intron 1 of 2) 13081 NM_001190796 4690 Hs.126889 NM_006153 ENSG00000158092 NCK1 NCK|NCKalpha|nck-1 NCK adaptor protein 1 protein-coding chr2-8354 chr2 109438716 109438926 + 6.60 0.000 intron (NM_001099289, intron 7 of 9) Charlie17a|DNA|hAT-Charlie -125196 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr14-3324 chr14 88611913 88612123 + 6.60 0.000 TTS (NM_183387) TTS (NM_183387) 17598 NM_207662 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr12-7766 chr12 95429329 95429539 + 6.60 0.000 Intergenic Intergenic -44718 NM_001317183 10988 Hs.444986 NM_006838 ENSG00000111142 METAP2 MAP2|MNPEP|p67eIF2 methionyl aminopeptidase 2 protein-coding chr6-7096 chr6 34178916 34179126 + 6.60 0.000 Intergenic MER52D|LTR|ERV1 -23399 NM_001256809 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr11-4592 chr11 133999483 133999693 + 6.60 0.000 Intergenic Intergenic -32684 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LINC02731 - long intergenic non-protein coding RNA 2731 ncRNA chr3-8293 chr3 58142772 58142982 + 6.60 0.000 intron (NM_001164318, intron 31 of 45) intron (NM_001164318, intron 31 of 45) 27758 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr15-2609 chr15 65209819 65210029 + 6.60 0.000 intron (NM_003613, intron 1 of 8) intron (NM_003613, intron 1 of 8) 1549 NM_003613 8483 Hs.442180 NM_003613 ENSG00000138615 CILP CILP-1|HsT18872 cartilage intermediate layer protein protein-coding chr3-5544 chr3 2621948 2622158 + 6.60 0.000 intron (NM_175607, intron 4 of 24) intron (NM_175607, intron 4 of 24) -270162 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr3-8115 chr3 19413135 19413345 + 6.60 0.000 intron (NM_144633, intron 7 of 15) L1PA16|LINE|L1 -98309 NR_039954 100616291 NR_039954 ENSG00000271898 MIR4791 mir-4791 microRNA 4791 ncRNA chr17-4180 chr17 8397999 8398209 + 6.60 0.000 promoter-TSS (NM_001146684) promoter-TSS (NM_001146684) -277 NM_001146684 643904 Hs.526550 NM_001146684 ENSG00000189051 RNF222 - ring finger protein 222 protein-coding chr9-7214 chr9 343303 343513 + 6.60 0.000 intron (NM_001193536, intron 13 of 46) AluJr4|SINE|Alu 70360 NM_001193536 81704 Hs.132599 NM_203447 ENSG00000107099 DOCK8 HEL-205|MRD2|ZIR8 dedicator of cytokinesis 8 protein-coding chr3-4213 chr3 134009748 134009958 + 6.60 0.000 intron (NM_005630, intron 1 of 13) MIRb|SINE|MIR 20072 NM_005630 6578 Hs.518270 NM_005630 ENSG00000174640 SLCO2A1 MATR1|OATP2A1|PGT|PHOAR2|SLC21A2 solute carrier organic anion transporter family member 2A1 protein-coding chrX-1159 chrX 44958030 44958240 + 6.60 0.000 intron (NR_111960, intron 2 of 27) intron (NR_111960, intron 2 of 27) 84960 NM_001291417 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding chr14-1700 chr14 103687097 103687307 + 6.60 0.000 TTS (NM_005552) TTS (NM_005552) 28249 NM_001371232 chr2-7387 chr2 7114872 7115082 + 6.60 0.000 Intergenic HAL1|LINE|L1 -37097 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr10-4270 chr10 1296324 1296534 + 6.60 0.000 intron (NM_018702, intron 3 of 9) intron (NM_018702, intron 3 of 9) 136661 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr5-4590 chr5 28412303 28412513 + 6.60 0.000 Intergenic MER66B|LTR|ERV1 -124743 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr15-4136 chr15 84154196 84154406 + 6.60 0.000 Intergenic Intergenic 16683 NR_033787 440299 Hs.454641 NR_033787 DNM1P41 DNM1DN11-6|DNM1DN11.6|DNM1DN11@ dynamin 1 pseudogene 41 pseudo chr11-3902 chr11 112290042 112290252 + 6.60 0.000 intron (NR_126004, intron 1 of 3) CpG 19398 NR_126004 283140 Hs.651827 NR_126004 ENSG00000250303 LINC02762 - long intergenic non-protein coding RNA 2762 ncRNA chr9-7384 chr9 18255864 18256074 + 6.60 0.000 Intergenic Intergenic -218184 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr7-9377 chr7 130786809 130787019 + 6.60 0.000 Intergenic Intergenic -52881 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr15-3674 chr15 38577782 38577992 + 6.60 0.000 Intergenic Intergenic -13073 NM_001128602 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr21-1360 chr21 37195240 37195450 + 6.60 0.000 intron (NM_003316, intron 41 of 45) intron (NM_003316, intron 41 of 45) -1419 NR_046651 100874006 Hs.570411 NR_046651 ENSG00000228677 TTC3-AS1 - TTC3 antisense RNA 1 ncRNA chr4-7958 chr4 111738762 111738972 + 6.60 0.000 Intergenic Intergenic -406587 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr12-7836 chr12 101445609 101445819 + 6.60 0.000 Intergenic Intergenic -29622 NM_152323 121599 Hs.577097 NM_152323 ENSG00000166211 SPIC SPI-C Spi-C transcription factor protein-coding chr12-4573 chr12 30138455 30138665 + 6.60 0.000 Intergenic L1MEf|LINE|L1 -353801 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr8-5912 chr8 17722906 17723116 + 6.60 0.000 promoter-TSS (NM_001166393) promoter-TSS (NM_001166393) -436 NM_001166393 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr22-3421 chr22 38065353 38065563 + 6.60 0.000 intron (NM_001039584, intron 4 of 12) intron (NM_001039584, intron 4 of 12) 8054 NM_012407 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr7-5749 chr7 74263879 74264089 + 6.60 0.000 Intergenic Intergenic -9526 NM_001278791 5982 Hs.647062 NM_002914 ENSG00000049541 RFC2 RFC40 replication factor C subunit 2 protein-coding chr2-13025 chr2 108175509 108175719 + 6.60 0.000 intron (NR_131251, intron 3 of 4) ERVL-E-int|LTR|ERVL 42227 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA chr1-15673 chr1 166327840 166328050 + 6.60 0.000 Intergenic Intergenic -161190 NR_135199 149297 Hs.22930 NM_001017961 ENSG00000188859 FAM78B - family with sequence similarity 78 member B protein-coding chr2-10234 chr2 111168629 111168839 + 6.60 0.000 TTS (NM_001204112) TTS (NM_001204112) 47820 NM_138623 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr17-5601 chr17 48192870 48193080 + 6.60 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -36464 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr10-8430 chr10 85817152 85817362 + 6.60 0.000 intron (NM_017551, intron 8 of 15) L1PA15|LINE|L1 239526 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr17-6585 chr17 49486775 49486985 + 6.60 0.000 Intergenic Intergenic -8413 NM_002507 4804 Hs.415768 NM_002507 ENSG00000064300 NGFR CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR nerve growth factor receptor protein-coding chr8-6087 chr8 26899857 26900067 + 6.60 0.000 Intergenic Intergenic -32684 NM_000680 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr11-5240 chr11 24337273 24337483 + 6.60 0.000 Intergenic Intergenic -159675 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr3-7595 chr3 12808146 12808356 + 6.60 0.000 exon (NM_001162499, exon 4 of 15) exon (NM_001162499, exon 4 of 15) 11571 NM_012298 23066 Hs.343664 NM_012298 ENSG00000144712 CAND2 TIP120B|Tp120b cullin associated and neddylation dissociated 2 (putative) protein-coding chr12-3870 chr12 111011953 111012163 + 6.60 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -22107 NM_015267 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr19-5001 chr19 47089470 47089680 + 6.60 0.000 intron (NM_015168, intron 5 of 14) intron (NM_015168, intron 5 of 14) 24201 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chr8-2262 chr8 76581024 76581234 + 6.60 0.000 Intergenic Intergenic -100118 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr18-1876 chr18 26959330 26959540 + 6.60 0.000 intron (NM_031422, intron 4 of 5) L1PA16|LINE|L1 -93632 NM_001317384 361 Hs.315369 NM_001650 ENSG00000171885 AQP4 MIWC|WCH4 aquaporin 4 protein-coding chr4-7454 chr4 69518731 69518941 + 6.60 0.000 intron (NM_001297616, intron 1 of 6) intron (NM_001297616, intron 1 of 6) 7178 NM_001297616 7363 Hs.285887 NM_021139 ENSG00000156096 UGT2B4 HLUG25|UDPGT2B4|UDPGTH1|UDPGTh-1|UGT2B11 UDP glucuronosyltransferase family 2 member B4 protein-coding chr2-9839 chr2 163172048 163172258 + 6.60 0.000 Intergenic MIR|SINE|MIR -333386 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr14-4152 chr14 75614136 75614346 + 6.60 0.000 intron (NM_001195283, intron 1 of 9) intron (NM_001195283, intron 1 of 9) 8701 NM_001195283 55640 Hs.509966 NM_017791 ENSG00000119686 FLVCR2 C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH|SLC49A2 feline leukemia virus subgroup C cellular receptor family member 2 protein-coding chr4-4095 chr4 5390601 5390811 + 6.60 0.000 intron (NM_001306082, intron 5 of 12) MLT1C|LTR|ERVL-MaLR -133863 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr14-5016 chr14 78075646 78075856 + 6.60 0.000 Intergenic Intergenic -94622 NR_073547 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr22-2342 chr22 42036096 42036306 + 6.60 0.000 Intergenic AluY|SINE|Alu 34611 NM_000262 4668 Hs.75372 NM_000262 ENSG00000198951 NAGA D22S674|GALB alpha-N-acetylgalactosaminidase protein-coding chrX-2477 chrX 86924860 86925070 + 6.60 0.000 Intergenic MLT1E|LTR|ERVL-MaLR -592837 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr11-6031 chr11 26569354 26569564 + 6.60 0.000 intron (NM_001135091, intron 1 of 4) intron (NM_001135091, intron 1 of 4) 2804 NM_145650 143662 Hs.407152 NM_145650 ENSG00000169550 MUC15 MUC-15|PAS3|PASIII mucin 15, cell surface associated protein-coding chr7-4734 chr7 55784255 55784465 + 6.60 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 78392 NM_207366 346288 Hs.453629 NM_207366 ENSG00000154997 SEPTIN14 SEPT14 septin 14 protein-coding chr5-4162 chr5 97484361 97484571 + 6.60 0.000 Intergenic THE1C|LTR|ERVL-MaLR -20230 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr1-16601 chr1 237386187 237386397 + 6.60 0.000 intron (NM_001035, intron 8 of 104) intron (NM_001035, intron 8 of 104) -84827 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr17-7463 chr17 14837284 14837494 + 6.60 0.000 Intergenic Intergenic -177416 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr20-4129 chr20 42691452 42691662 + 6.60 0.000 intron (NM_133170, intron 6 of 31) intron (NM_133170, intron 6 of 31) 6074 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr19-3849 chr19 17632896 17633106 + 6.60 0.000 intron (NM_001080421, intron 26 of 41) intron (NM_001080421, intron 26 of 41) 55198 NM_001080421 23025 Hs.164502 NM_001080421 ENSG00000130477 UNC13A Munc13-1 unc-13 homolog A protein-coding chr5-5012 chr5 83446861 83447071 + 6.60 0.000 Intergenic Intergenic -24708 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr2-11854 chr2 21246567 21246777 + 6.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR 122686 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr2-7792 chr2 43262319 43262529 + 6.60 0.000 intron (NM_001083953, intron 36 of 37) MLT1J|LTR|ERVL-MaLR 35213 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr2-4699 chr2 224569762 224569972 + 6.60 0.000 promoter-TSS (NM_001257198) promoter-TSS (NM_001257198) 88 NM_001257198 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr8-4557 chr8 125811991 125812201 + 6.60 0.000 Intergenic MIRb|SINE|MIR 139101 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chrX-2219 chrX 42410801 42411011 + 6.60 0.000 Intergenic L1PA11|LINE|L1 367257 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr3-10636 chr3 147505612 147505822 + 6.60 0.000 intron (NR_121655, intron 1 of 2) intron (NR_121655, intron 1 of 2) 84390 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr4-6874 chr4 11433925 11434135 + 6.60 0.000 Intergenic Intergenic -5136 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr9-8049 chr9 96602704 96602914 + 6.60 0.000 intron (NR_147239, intron 1 of 14) intron (NR_147239, intron 1 of 14) 17034 NR_147239 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr10-6234 chr10 63197727 63197937 + 6.60 0.000 intron (NM_001322258, intron 11 of 24) MER20|DNA|hAT-Charlie 64504 NM_030759 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr3-10649 chr3 148643627 148643837 + 6.60 0.000 Intergenic Intergenic -54139 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr2-14000 chr2 190974745 190974955 + 6.60 0.000 TTS (NM_139266) TTS (NM_139266) 39400 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr2-6420 chr2 142596539 142596749 + 6.60 0.000 Intergenic L1MA5|LINE|L1 -281020 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr10-7655 chr10 26238434 26238644 + 6.60 0.000 intron (NM_000818, intron 7 of 16) intron (NM_000818, intron 7 of 16) 21765 NM_001134366 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr20-2686 chr20 46308313 46308523 + 6.60 0.000 promoter-TSS (NM_021248) promoter-TSS (NM_021248) 80 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr7-7681 chr7 153492278 153492488 + 6.60 0.000 Intergenic Intergenic -80149 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr1-13781 chr1 17741392 17741602 + 6.60 0.000 Intergenic Intergenic -13836 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr10-8288 chr10 77173842 77174052 + 6.60 0.000 intron (NM_001271519, intron 5 of 28) intron (NM_001271519, intron 5 of 28) 33116 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr6-4135 chr6 165987079 165987289 + 6.60 0.000 promoter-TSS (NR_027284) promoter-TSS (NR_027284) -367 NR_027284 441177 Hs.708964 NM_001013720 ENSG00000281832 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA chr7-5237 chr7 16695695 16695905 + 6.60 0.000 intron (NM_001362717, intron 8 of 11) intron (NM_001362717, intron 8 of 11) 34586 NM_001362719 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr2-13641 chr2 160294330 160294540 + 6.60 0.000 intron (NM_002897, intron 6 of 13) intron (NM_002897, intron 6 of 13) -22540 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chr4-7948 chr4 110043196 110043406 + 6.60 0.000 Intergenic Intergenic 130418 NM_001178131 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr2-9985 chr2 12844659 12844869 + 6.60 0.000 Intergenic LTR33A|LTR|ERVL 107397 NR_036072 100422986 NR_036072 ENSG00000264370 MIR3125 mir-3125 microRNA 3125 ncRNA chr2-13391 chr2 138818193 138818403 + 6.60 0.000 Intergenic Intergenic -37908 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chrX-3324 chrX 123751132 123751342 + 6.60 0.000 Intergenic AluY|SINE|Alu -18185 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr16-4307 chr16 28326900 28327110 + 6.60 0.000 Intergenic Intergenic 34480 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr6-6154 chr6 2110504 2110714 + 6.60 0.000 intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 65382 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr6-7725 chr6 89950732 89950942 + 6.60 0.000 exon (NM_001170794, exon 5 of 7) exon (NM_001170794, exon 5 of 7) 56368 NM_032602 84694 Hs.334499 NM_032602 ENSG00000135355 GJA10 CX62 gap junction protein alpha 10 protein-coding chr16-4096 chr16 2325199 2325409 + 6.60 0.000 intron (NM_001089, intron 5 of 32) intron (NM_001089, intron 5 of 32) 15424 NM_001089 21 Hs.26630 NM_001089 ENSG00000167972 ABCA3 ABC-C|ABC3|EST111653|LBM180|SMDP3 ATP binding cassette subfamily A member 3 protein-coding chr3-7599 chr3 13349089 13349299 + 6.60 0.000 intron (NM_024923, intron 20 of 39) L1M4b|LINE|L1 71128 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr16-4820 chr16 87070721 87070931 + 6.60 0.000 Intergenic Intergenic 13042 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr4-5640 chr4 7668213 7668423 + 6.60 0.000 intron (NM_020777, intron 8 of 26) intron (NM_020777, intron 8 of 26) -85772 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr20-3579 chr20 3734885 3735095 + 6.60 0.000 intron (NM_052970, intron 1 of 12) AluJb|SINE|Alu 2305 NM_001197327 116835 Hs.516854 NM_052970 ENSG00000132622 HSPA12B C20orf60 heat shock protein family A (Hsp70) member 12B protein-coding chr6-2210 chr6 41531280 41531490 + 6.60 0.000 intron (NR_126415, intron 1 of 1) intron (NR_126415, intron 1 of 1) 14858 NR_126417 101060264 Hs.571099 NR_126415 ENSG00000234753 FOXP4-AS1 - FOXP4 antisense RNA 1 ncRNA chr10-6180 chr10 16506965 16507175 + 6.60 0.000 intron (NM_030664, intron 5 of 5) intron (NM_030664, intron 5 of 5) 14809 NM_001010908 389941 Hs.676792 NM_001010908 ENSG00000165985 C1QL3 C1QTNF13|C1ql|CTRP13|K100 complement C1q like 3 protein-coding chr17-5515 chr17 42532110 42532320 + 6.60 0.000 Intergenic (CGC)n|Simple_repeat|Simple_repeat -4026 NM_000263 4669 Hs.50727 NM_000263 ENSG00000108784 NAGLU CMT2V|MPS-IIIB|MPS3B|NAG|UFHSD N-acetyl-alpha-glucosaminidase protein-coding chr1-15550 chr1 158274881 158275091 + 6.60 0.000 Intergenic Intergenic -14937 NM_001765 911 Hs.132448 NM_001765 ENSG00000158481 CD1C BDCA1|CD1|CD1A|R7 CD1c molecule protein-coding chr8-5884 chr8 15842351 15842561 + 6.60 0.000 Intergenic LTR68|LTR|ERV1 302193 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr4-7753 chr4 93781980 93782190 + 6.60 0.000 Intergenic Intergenic -46668 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr14-4998 chr14 76651623 76651833 + 6.60 0.000 Intergenic MIR|SINE|MIR -109740 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr6-3572 chr6 64149778 64149988 + 6.60 0.000 intron (NM_001292009, intron 31 of 43) MIRc|SINE|MIR 343047 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr2-8149 chr2 83163359 83163569 + 6.60 0.000 Intergenic Intergenic 306661 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr16-3139 chr16 74243545 74243755 + 6.60 0.000 Intergenic Intergenic -28129 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr12-3895 chr12 120999329 120999539 + 6.60 0.000 intron (NM_000545, intron 8 of 9) intron (NM_000545, intron 8 of 9) 17053 NM_001286195 64897 Hs.528671 NM_022895 ENSG00000157895 C12orf43 Custos chromosome 12 open reading frame 43 protein-coding chr11-7870 chr11 120914971 120915181 + 6.60 0.000 intron (NM_001282470, intron 12 of 19) intron (NM_001282470, intron 12 of 19) -20279 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr2-12372 chr2 52169857 52170067 + 6.60 0.000 intron (NR_135237, intron 7 of 10) intron (NR_135237, intron 7 of 10) -200686 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr2-12658 chr2 74342666 74342876 + 6.60 0.000 intron (NM_133478, intron 1 of 30) intron (NM_133478, intron 1 of 30) 645 NM_133478 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr6-3422 chr6 111118699 111118909 + 6.60 0.000 intron (NM_018593, intron 1 of 5) intron (NM_018593, intron 1 of 5) 4970 NR_145796 109623478 NR_145796 SNORD166 - small nucleolar RNA, C/D box 166 snoRNA chr20-4056 chr20 37863487 37863697 + 6.60 0.000 intron (NM_001281495, intron 16 of 16) intron (NM_001281495, intron 16 of 16) -39535 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr9-4264 chr9 97348509 97348719 + 6.60 0.000 intron (NM_020893, intron 20 of 36) intron (NM_020893, intron 20 of 36) 15067 NR_031637 100302223 NR_031637 ENSG00000221269 MIR1302-8 MIRN1302-8|hsa-mir-1302-8 microRNA 1302-8 ncRNA chr8-4152 chr8 76553483 76553693 + 6.60 0.000 Intergenic Intergenic -127659 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr17-7023 chr17 58279820 58280030 + 6.60 0.000 exon (NM_000250, exon 3 of 12) exon (NM_000250, exon 3 of 12) 1010 NM_000250 4353 Hs.458272 NM_000250 ENSG00000005381 MPO - myeloperoxidase protein-coding chr5-7412 chr5 26856196 26856406 + 6.60 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 182285 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr4-5979 chr4 180515711 180515921 + 6.60 0.000 Intergenic L2a|LINE|L2 643333 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr10-4498 chr10 85205845 85206055 + 6.60 0.000 Intergenic Intergenic -7012 NR_120667 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr1-12024 chr1 105025064 105025274 + 6.60 0.000 Intergenic L1MEc|LINE|L1 593766 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr7-9590 chr7 147823534 147823744 + 6.60 0.000 intron (NM_014141, intron 12 of 22) intron (NM_014141, intron 12 of 22) 151960 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr1-8264 chr1 35538507 35538717 + 6.60 0.000 intron (NM_024874, intron 2 of 20) AluSx|SINE|Alu 18791 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chrX-1587 chrX 82000387 82000597 + 6.60 0.000 Intergenic AluY|SINE|Alu 798390 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr11-8497 chr11 120788774 120788984 + 6.60 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 30236 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr7-9109 chr7 106878206 106878416 + 6.60 0.000 intron (NM_001282426, intron 5 of 10) L1ME1|LINE|L1 12832 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr12-5743 chr12 130319058 130319268 + 6.60 0.000 Intergenic Intergenic -18724 NM_001190971 9271 Hs.405659 NM_004764 ENSG00000125207 PIWIL1 CT80.1|HIWI|MIWI|PIWI piwi like RNA-mediated gene silencing 1 protein-coding chr5-7364 chr5 19184873 19185083 + 6.60 0.000 Intergenic L1PA15-16|LINE|L1 701294 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr17-4047 chr17 77672930 77673140 + 6.60 0.000 Intergenic Intergenic 55524 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr12-7877 chr12 105735126 105735336 + 6.60 0.000 intron (NR_110109, intron 3 of 4) intron (NR_110109, intron 3 of 4) 28457 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr20-2269 chr20 3436824 3437034 + 6.60 0.000 Intergenic AluJb|SINE|Alu -29267 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr18-2373 chr18 62357854 62358064 + 6.60 0.000 intron (NM_001278268, intron 4 of 9) intron (NM_001278268, intron 4 of 9) 32649 NM_003839 8792 Hs.204044 NM_003839 ENSG00000141655 TNFRSF11A CD265|FEO|LOH18CR1|ODFR|OFE|OPTB7|OSTS|PDB2|RANK|TRANCER TNF receptor superfamily member 11a protein-coding chr11-6022 chr11 25652016 25652226 + 6.60 0.000 Intergenic Intergenic -537002 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr5-6253 chr5 94866430 94866640 + 6.60 0.000 intron (NM_001002796, intron 17 of 22) intron (NM_001002796, intron 17 of 22) 215331 NM_001002796 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr9-3327 chr9 94593681 94593891 + 6.60 0.000 promoter-TSS (NM_003837) promoter-TSS (NM_003837) 38 NM_003837 8789 Hs.61255 NM_003837 ENSG00000130957 FBP2 - fructose-bisphosphatase 2 protein-coding chr5-6449 chr5 167274074 167274284 + 6.60 0.000 intron (NM_001122679, intron 1 of 29) L1MD1|LINE|L1 -105778 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr4-2632 chr4 151844296 151844506 + 6.60 0.000 Intergenic MER46C|DNA|TcMar-Tigger -83378 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr5-7578 chr5 41474833 41475043 + 6.60 0.000 intron (NM_001005473, intron 1 of 2) HERVK3-int|LTR|ERVK 35663 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding chr1-13723 chr1 15505606 15505816 + 6.60 0.000 intron (NM_001229, intron 5 of 8) intron (NM_001229, intron 5 of 8) 18504 NM_001229 842 Hs.329502 NM_001229 ENSG00000132906 CASP9 APAF-3|APAF3|ICE-LAP6|MCH6|PPP1R56 caspase 9 protein-coding chr12-7735 chr12 92728371 92728581 + 6.60 0.000 Intergenic (TATA)n|Simple_repeat|Simple_repeat -8013 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 - pleckstrin homology and RhoGEF domain containing G7 protein-coding chr1-10268 chr1 144031649 144031859 + 6.60 0.000 intron (NR_120535, intron 2 of 7) intron (NR_120535, intron 2 of 7) -58235 NM_001346067 554282 NM_001287385 ENSG00000263513 FAM72C - family with sequence similarity 72 member C protein-coding chr14-4440 chr14 33114675 33114885 + 6.60 0.000 intron (NM_001164749, intron 2 of 11) MamGypsy2-I|LTR|Gypsy 175901 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr2-11322 chr2 199356476 199356686 + 6.60 0.000 intron (NM_001172509, intron 6 of 10) intron (NM_001172509, intron 6 of 10) 101358 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr12-7957 chr12 109730899 109731109 + 6.60 0.000 intron (NM_032829, intron 1 of 2) MIRb|SINE|MIR 17179 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr11-5059 chr11 106807769 106807979 + 6.60 0.000 intron (NM_001256424, intron 5 of 8) MLT2A2|LTR|ERVL 210602 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr11-8048 chr11 24357009 24357219 + 6.60 0.000 Intergenic MER1B|DNA|hAT-Charlie -139939 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr15-2337 chr15 25239072 25239282 + 6.60 0.000 promoter-TSS (NR_003353) promoter-TSS (NR_003353) -661 NR_003353 100033812 NR_003353 ENSG00000201907 SNORD115-38 HBII-52-38 small nucleolar RNA, C/D box 115-38 snoRNA chr18-962 chr18 41955711 41955921 + 6.60 0.000 intron (NM_001308020, intron 1 of 23) intron (NM_001308020, intron 1 of 23) 582 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr1-13643 chr1 10752463 10752673 + 6.60 0.000 intron (NM_001079843, intron 2 of 20) intron (NM_001079843, intron 2 of 20) 44078 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr2-11635 chr2 5384822 5385032 + 6.60 0.000 Intergenic MER45C|DNA|hAT-Tip100 306191 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr5-8697 chr5 142070818 142071028 + 6.60 0.000 Intergenic MER117|DNA|hAT-Charlie -37856 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr10-5022 chr10 33883943 33884153 + 6.60 0.000 Intergenic Intergenic -111368 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr4-8133 chr4 127294351 127294561 + 6.60 0.000 Intergenic L1PB1|LINE|L1 -338501 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chrX-5239 chrX 136857601 136857811 + 6.60 0.000 Intergenic AluSx1|SINE|Alu 21565 NR_002735 26787 NR_002735 ENSG00000206979 SNORD61 HBII-342|RNU61|U61 small nucleolar RNA, C/D box 61 snoRNA chr5-5497 chr5 141693949 141694159 + 6.60 0.000 Intergenic Intergenic -11824 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr6-7083 chr6 33963665 33963875 + 6.60 0.000 Intergenic MIR|SINE|MIR 36281 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr2-6605 chr2 236705675 236705885 + 6.60 0.000 Intergenic Intergenic 135955 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr11-10715 chr11 131178421 131178631 + 6.60 0.000 Intergenic Intergenic -192089 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr10-7646 chr10 25047984 25048194 + 6.60 0.000 intron (NM_001270383, intron 2 of 5) intron (NM_001270383, intron 2 of 5) 14190 NM_001270383 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr12-5864 chr12 50003554 50003764 + 6.60 0.000 intron (NM_001320006, intron 6 of 17) intron (NM_001320006, intron 6 of 17) 21835 NM_001319999 29127 Hs.505469 NM_013277 ENSG00000161800 RACGAP1 CYK4|HsCYK-4|ID-GAP|MgcRacGAP Rac GTPase activating protein 1 protein-coding chr4-8711 chr4 183038450 183038660 + 6.60 0.000 non-coding (NR_003612, exon 1 of 1) non-coding (NR_003612, exon 1 of 1) 890 NR_003612 403315 Hs.652187 NR_003612 ENSG00000230219 FAM92A1P2 FAM92A3 family with sequence similarity 92, member A3 pseudo chr20-1502 chr20 32652124 32652334 + 6.60 0.000 intron (NM_182584, intron 1 of 5) AluSz6|SINE|Alu 21712 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr11-7949 chr11 4804225 4804435 + 6.60 0.000 promoter-TSS (NM_001005177) promoter-TSS (NM_001005177) 50 NM_001005177 119695 Hs.553563 NM_001005177 ENSG00000279270 OR52R1 OR11-22 olfactory receptor family 52 subfamily R member 1 (gene/pseudogene) protein-coding chr11-10003 chr11 79605250 79605460 + 6.60 0.000 Intergenic Intergenic -164325 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr2-10919 chr2 73131998 73132208 + 6.60 0.000 Intergenic L1M6|LINE|L1 -19155 NM_015470 26056 Hs.24557 NM_015470 ENSG00000135631 RAB11FIP5 GAF1|RIP11|pp75 RAB11 family interacting protein 5 protein-coding chr7-4085 chr7 25895441 25895651 + 6.60 0.000 Intergenic Intergenic 54440 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr12-3004 chr12 123523332 123523542 + 6.60 0.000 intron (NM_001319302, intron 2 of 7) intron (NM_001319302, intron 2 of 7) 1521 NM_001319302 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr14-3781 chr14 56744246 56744456 + 6.60 0.000 Intergenic UCON27|Unknown|Unknown 61316 NM_001270525 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding chr6-5173 chr6 128972056 128972266 + 6.60 0.000 intron (NM_000426, intron 1 of 64) intron (NM_000426, intron 1 of 64) 89020 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr11-8541 chr11 131377343 131377553 + 6.60 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 6833 NM_001352006 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr20-2517 chr20 34503138 34503348 + 6.60 0.000 intron (NM_001257137, intron 24 of 25) MER20B|DNA|hAT-Charlie -13141 NM_001281729 83658 Hs.593920 NM_014183 ENSG00000125971 DYNLRB1 BITH|BLP|DNCL2A|DNLC2A|ROBLD1 dynein light chain roadblock-type 1 protein-coding chr2-7070 chr2 168233634 168233844 + 6.60 0.000 intron (NM_013233, intron 1 of 17) intron (NM_013233, intron 1 of 17) 13856 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr22-1416 chr22 41928649 41928859 + 6.60 0.000 Intergenic Intergenic -1937 NM_052945 115650 Hs.344088 NM_052945 ENSG00000159958 TNFRSF13C BAFF-R|BAFFR|BROMIX|CD268|CVID4|prolixin TNF receptor superfamily member 13C protein-coding chr9-4179 chr9 21965551 21965761 + 6.60 0.000 Intergenic CpG -1483 NR_024274 51198 Hs.721053 NM_016349 CDKN2A-DT C9orf53|CDKN2A-AS1|bA149I2.3 CDKN2A divergent transcript ncRNA chr21-1707 chr21 31570549 31570759 + 6.60 0.000 Intergenic Intergenic 11421 NM_001321023 150051 Hs.708976 NM_001321023 LOC150051 - uncharacterized LOC150051 protein-coding chr13-4418 chr13 110366271 110366481 + 6.60 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 25418 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr20-2952 chr20 28841844 28842054 + 6.60 0.000 Intergenic ALR/Alpha|Satellite|centr -238441 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr1-15350 chr1 147033161 147033371 + 6.60 0.000 intron (NR_024442, intron 1 of 5) intron (NR_024442, intron 1 of 5) 9773 NR_024442 728989 Hs.537068 NR_024442 LOC728989 - phosphodiesterase 4D interacting protein pseudogene pseudo chr11-5109 chr11 121909850 121910060 + 6.60 0.000 Intergenic Intergenic 189889 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr9-7363 chr9 16560510 16560720 + 6.60 0.000 intron (NM_001317939, intron 3 of 6) AluJr|SINE|Alu -166199 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr19-4412 chr19 3714547 3714757 + 6.60 0.000 intron (NM_001267560, intron 1 of 20) Alu|SINE|Alu 6268 NM_001267560 27134 Hs.25527 NM_014428 ENSG00000105289 TJP3 ZO-3|ZO3 tight junction protein 3 protein-coding chr1-14292 chr1 38372335 38372545 + 6.60 0.000 Intergenic Intergenic -102756 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr9-8215 chr9 109297617 109297827 + 6.60 0.000 intron (NM_019114, intron 1 of 25) intron (NM_019114, intron 1 of 25) 23242 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr13-3799 chr13 45741240 45741450 + 6.60 0.000 Intergenic MIRb|SINE|MIR 38876 NM_001286342 220082 Hs.186363 NM_152719 ENSG00000174015 SPERT CBY2|NURIT spermatid associated protein-coding chrX-5016 chrX 119104027 119104237 + 6.60 0.000 intron (NM_020721, intron 7 of 13) L1MB5|LINE|L1 46447 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr6-3785 chr6 20107929 20108139 + 6.60 0.000 intron (NR_073465, intron 9 of 9) intron (NR_073465, intron 9 of 9) 104435 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr4-8158 chr4 129144842 129145052 + 6.60 0.000 Intergenic LTR3B_|LTR|ERVK 48795 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr21-1318 chr21 7949794 7950004 + 6.60 0.000 Intergenic (CATTC)n|Satellite|Satellite -120267 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chrX-4232 chrX 38636336 38636546 + 6.60 0.000 intron (NM_004615, intron 1 of 7) MamRTE1|LINE|RTE-BovB 74963 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr5-4618 chr5 32377965 32378175 + 6.60 0.000 intron (NM_016107, intron 17 of 19) intron (NM_016107, intron 17 of 19) 16405 NR_030305 693164 NR_030305 ENSG00000207956 MIR579 MIRN579|hsa-mir-579 microRNA 579 ncRNA chr4-7385 chr4 61498880 61499090 + 6.60 0.000 intron (NM_001322246, intron 3 of 25) intron (NM_001322246, intron 3 of 25) 296813 NM_001371342 chr1-14233 chr1 36299026 36299236 + 6.60 0.000 intron (NM_001321471, intron 10 of 12) MIRc|SINE|MIR -7237 NM_001162530 79729 Hs.524496 NM_024676 ENSG00000214193 SH3D21 C1orf113 SH3 domain containing 21 protein-coding chr14-2663 chr14 72026667 72026877 + 6.60 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 93245 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr12-5844 chr12 46154260 46154470 + 6.60 0.000 Intergenic Intergenic 112151 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr3-9315 chr3 44073182 44073392 + 6.60 0.000 Intergenic LTR16C|LTR|ERVL -40925 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr4-7947 chr4 109910331 109910541 + 6.60 0.000 Intergenic Intergenic -2447 NM_001963 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr6-5626 chr6 54849558 54849768 + 6.60 0.000 intron (NM_001010872, intron 1 of 4) intron (NM_001010872, intron 1 of 4) 2892 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr1-9755 chr1 54692436 54692646 + 6.60 0.000 exon (NM_001291332, exon 14 of 22) exon (NM_001291332, exon 14 of 22) -23281 NM_001291333 7268 Hs.412482 NM_004623 ENSG00000243725 TTC4 CNS1 tetratricopeptide repeat domain 4 protein-coding chr7-5983 chr7 101911032 101911242 + 6.60 0.000 intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 93511 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr5-5875 chr5 8384445 8384655 + 6.60 0.000 intron (NR_039984, intron 3 of 5) intron (NR_039984, intron 3 of 5) 73014 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr6-2643 chr6 162116795 162117005 + 6.60 0.000 intron (NM_004562, intron 4 of 11) intron (NM_004562, intron 4 of 11) -610232 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr10-8830 chr10 110083074 110083284 + 6.60 0.000 intron (NM_001121, intron 1 of 13) intron (NM_001121, intron 1 of 13) -74798 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chrX-3564 chrX 69412933 69413143 + 6.60 0.000 Intergenic Intergenic -92197 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr14-5139 chr14 90534230 90534440 + 6.60 0.000 3' UTR (NM_001010854, exon 20 of 20) 3' UTR (NM_001010854, exon 20 of 20) -17126 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr14-2473 chr14 92638955 92639165 + 6.60 0.000 intron (NM_024832, intron 4 of 9) intron (NM_024832, intron 4 of 9) 62826 NM_001319987 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr8-2248 chr8 47276930 47277140 + 6.60 0.000 intron (NM_001352942, intron 1 of 17) AluSp|SINE|Alu 16097 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr2-14035 chr2 194193168 194193378 + 6.60 0.000 Intergenic Intergenic -150996 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr2-8883 chr2 177103586 177103796 + 6.60 0.000 Intergenic MER1A|DNA|hAT-Charlie 108720 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA GL000224.1-7 GL000224.1 13520 13730 + 6.60 0.000 NA NA NA NA chr10-9107 chr10 126770127 126770337 + 6.60 0.000 Intergenic Intergenic -99722 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr12-7726 chr12 91853278 91853488 + 6.60 0.000 Intergenic Intergenic 288330 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr1-14844 chr1 76503349 76503559 + 6.60 0.000 intron (NM_001349109, intron 3 of 3) intron (NM_001349109, intron 3 of 3) 275813 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr6-6588 chr6 140269655 140269865 + 6.60 0.000 Intergenic Intergenic 64508 NR_037441 100500879 NR_037441 ENSG00000263514 MIR3668 - microRNA 3668 ncRNA chr14-3068 chr14 61719259 61719469 + 6.60 0.000 intron (NR_144368, intron 1 of 2) MIRb|SINE|MIR 21742 NM_001243084 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr1-14501 chr1 49999922 50000132 + 6.60 0.000 intron (NM_001323575, intron 1 of 12) L1PB1|LINE|L1 23927 NM_001323574 84871 Hs.551844 NM_032785 ENSG00000186094 AGBL4 CCP6 ATP/GTP binding protein like 4 protein-coding chr6-3514 chr6 34595751 34595961 + 6.60 0.000 intron (NM_022758, intron 3 of 3) intron (NM_022758, intron 3 of 3) -39523 NM_001252294 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr20-2099 chr20 24875078 24875288 + 6.60 0.000 Intergenic Intergenic -74086 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr19-3863 chr19 19084123 19084333 + 6.60 0.000 intron (NM_178526, intron 1 of 7) intron (NM_178526, intron 1 of 7) 20234 NM_001321544 284439 Hs.303669 NM_178526 ENSG00000181035 SLC25A42 MECREN solute carrier family 25 member 42 protein-coding chr8-3881 chr8 38144650 38144860 + 6.60 0.000 intron (NM_000349, intron 6 of 6) AluSx4|SINE|Alu 6197 NM_000349 6770 Hs.521535 NM_000349 ENSG00000147465 STAR STARD1 steroidogenic acute regulatory protein protein-coding chr1-11150 chr1 236289958 236290168 + 6.60 0.000 Intergenic Intergenic -8105 NM_019891 56605 Hs.558519 NM_019891 ENSG00000086619 ERO1B ERO1LB|Ero1beta endoplasmic reticulum oxidoreductase 1 beta protein-coding chr2-9150 chr2 211451921 211452131 + 6.60 0.000 intron (NM_001042599, intron 20 of 26) intron (NM_001042599, intron 20 of 26) 834455 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr1-11561 chr1 186183819 186184029 + 6.60 0.000 intron (NM_031935, intron 105 of 106) intron (NM_031935, intron 105 of 106) -112349 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr11-10047 chr11 83681520 83681730 + 6.60 0.000 intron (NM_001142699, intron 18 of 27) intron (NM_001142699, intron 18 of 27) 800 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr20-1785 chr20 57426918 57427128 + 6.60 0.000 Intergenic Intergenic -33967 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA chr13-3652 chr13 32095341 32095551 + 6.60 0.000 intron (NM_023037, intron 2 of 60) AluSg|SINE|Alu 63672 NM_023037 10129 Hs.507669 NM_023037 ENSG00000073910 FRY 13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1 FRY microtubule binding protein protein-coding chr16-6212 chr16 28024706 28024916 + 6.60 0.000 intron (NM_001109763, intron 1 of 6) MER91A|DNA|hAT-Tip100 38903 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chrX-4674 chrX 83241590 83241800 + 6.60 0.000 Intergenic L1MA1|LINE|L1 -266595 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr7-9753 chr7 159115724 159115934 + 6.60 0.000 intron (NR_130758, intron 2 of 12) intron (NR_130758, intron 2 of 12) -18625 NM_001308259 7434 Hs.585052 NM_003382 ENSG00000106018 VIPR2 C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R vasoactive intestinal peptide receptor 2 protein-coding chr9-7428 chr9 23491213 23491423 + 6.60 0.000 Intergenic L2a|LINE|L2 181081 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr10-7074 chr10 89202951 89203161 + 6.60 0.000 Intergenic (TACATG)n|Simple_repeat|Simple_repeat 4261 NM_003956 9023 Hs.47357 NM_003956 ENSG00000138135 CH25H C25H cholesterol 25-hydroxylase protein-coding chr17-6810 chr17 8754166 8754376 + 6.60 0.000 intron (NM_001128076, intron 4 of 6) intron (NM_001128076, intron 4 of 6) 4275 NM_001128076 388333 Hs.230205 NM_001128076 ENSG00000183318 SPDYE4 - speedy/RINGO cell cycle regulator family member E4 protein-coding chr16-5630 chr16 63923677 63923887 + 6.60 0.000 Intergenic L1PREC2|LINE|L1 1198281 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr3-8674 chr3 181539582 181539792 + 6.60 0.000 intron (NR_075091, intron 3 of 7) L1PREC2|LINE|L1 -70647 NR_004053 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr20-3419 chr20 44233637 44233847 + 6.60 0.000 Intergenic Intergenic -13357 NM_001256738 78997 Hs.517059 NM_024034 ENSG00000124194 GDAP1L1 dJ881L22.1|dJ995J12.1.1 ganglioside induced differentiation associated protein 1 like 1 protein-coding chr1-13938 chr1 23678982 23679192 + 6.60 0.000 Intergenic Intergenic -12692 NM_001199802 6135 Hs.719951 NM_000975 ENSG00000142676 RPL11 DBA7|GIG34|L11|uL5 ribosomal protein L11 protein-coding chr7-9496 chr7 137423729 137423939 + 6.60 0.000 intron (NM_001321710, intron 28 of 32) intron (NM_001321710, intron 28 of 32) -80101 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr6-5705 chr6 133049134 133049344 + 6.60 0.000 Intergenic (TCCC)n|Simple_repeat|Simple_repeat -38841 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr4-5920 chr4 145868987 145869197 + 6.60 0.000 intron (NM_178835, intron 5 of 14) intron (NM_178835, intron 5 of 14) 69731 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr5-6948 chr5 139786507 139786717 + 6.60 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -9196 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr7-8471 chr7 48826963 48827173 + 6.60 0.000 Intergenic LTR16A1|LTR|ERVL -97479 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr11-10054 chr11 84124341 84124551 + 6.60 0.000 intron (NM_001142699, intron 9 of 27) intron (NM_001142699, intron 9 of 27) 148834 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr1-4202 chr1 82873685 82873895 + 6.60 0.000 Intergenic A-rich|Low_complexity|Low_complexity -29393 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr12-3859 chr12 108151052 108151262 + 6.60 0.000 intron (NM_001304447, intron 1 of 9) intron (NM_001304447, intron 1 of 9) 19371 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr1-13059 chr1 175941702 175941912 + 6.60 0.000 Intergenic Intergenic 26672 NR_162097 113839518 NR_162097 MIR1843 - microRNA 1843 ncRNA chr11-2453 chr11 44949140 44949350 + 6.60 0.000 intron (NM_001258323, intron 1 of 7) intron (NM_001258323, intron 1 of 7) 915 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr3-7256 chr3 196103142 196103352 + 6.60 0.000 Intergenic L1M4|LINE|L1 -21157 NM_001313965 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr6-8441 chr6 152871237 152871447 + 6.60 0.000 Intergenic Intergenic 111699 NM_012177 26271 Hs.520506 NM_012177 ENSG00000112029 FBXO5 EMI1|FBX5|Fbxo31 F-box protein 5 protein-coding chr7-9170 chr7 114011201 114011411 + 6.60 0.000 Intergenic Intergenic -75021 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr2-12225 chr2 43391736 43391946 + 6.60 0.000 intron (NM_001083953, intron 29 of 37) intron (NM_001083953, intron 29 of 37) 164630 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr22-2420 chr22 18968363 18968573 + 6.60 0.000 Intergenic Intergenic -2030 NR_045121 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr1-14658 chr1 59076745 59076955 + 6.60 0.000 intron (NR_110626, intron 2 of 2) intron (NR_110626, intron 2 of 2) 56374 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA KI270442.1-19 KI270442.1 390304 390514 + 6.60 0.000 NA NA NA NA chr16-2929 chr16 2698090 2698300 + 6.60 0.000 intron (NM_018992, intron 3 of 5) intron (NM_018992, intron 3 of 5) 15672 NM_018992 54442 Hs.61960 NM_018992 ENSG00000167977 KCTD5 - potassium channel tetramerization domain containing 5 protein-coding chr5-9123 chr5 174327346 174327556 + 6.60 0.000 Intergenic Intergenic -8903 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr4-3496 chr4 141329271 141329481 + 6.60 0.000 intron (NR_121625, intron 1 of 3) intron (NR_121625, intron 1 of 3) 3241 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr11-9592 chr11 65174593 65174803 + 6.60 0.000 Intergenic Intergenic 4544 NM_001008778 387778 Hs.450642 NM_001008778 ENSG00000204710 SPDYC RINGOC|Ringo2 speedy/RINGO cell cycle regulator family member C protein-coding chr2-13380 chr2 137828601 137828811 + 6.60 0.000 Intergenic MER34B|LTR|ERV1 99226 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr1-13070 chr1 178576052 178576262 + 6.60 0.000 Intergenic Intergenic 33361 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 (putative) ncRNA chr14-3353 chr14 90533236 90533446 + 6.60 0.000 3' UTR (NM_001010854, exon 20 of 20) 3' UTR (NM_001010854, exon 20 of 20) -16132 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr1-9517 chr1 38764170 38764380 + 6.60 0.000 Intergenic Intergenic 95497 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr3-6823 chr3 147120199 147120409 + 6.60 0.000 Intergenic Intergenic 198381 NR_135560 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr12-8338 chr12 131115466 131115676 + 6.60 0.000 intron (NM_198827, intron 18 of 24) intron (NM_198827, intron 18 of 24) -49440 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA chr13-3723 chr13 39797634 39797844 + 6.60 0.000 Intergenic L2c|LINE|L2 -133604 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr7-6838 chr7 44449609 44449819 + 6.60 0.000 intron (NM_015332, intron 2 of 5) L1ME1|LINE|L1 40944 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr17-7428 chr17 10802159 10802369 + 6.60 0.000 intron (NR_036581, intron 1 of 1) intron (NR_036581, intron 1 of 1) 1835 NR_036581 100289255 Hs.306721 NR_036581 ENSG00000263429 TMEM238L LINC00675 transmembrane protein 238 like ncRNA chrX-5367 chrX 150219275 150219485 + 6.60 0.000 Intergenic OldhAT1|DNA|hAT-Ac -8624 NR_031748 100313839 NR_031748 ENSG00000252454 MIR2114 - microRNA 2114 ncRNA chr1-15909 chr1 184910946 184911156 + 6.60 0.000 intron (NM_052966, intron 1 of 13) MLT2B4|LTR|ERVL 63457 NM_052966 116496 Hs.518662 NM_052966 ENSG00000135842 NIBAN1 C1orf24|FAM129A|GIG39|NIBAN niban apoptosis regulator 1 protein-coding chr13-3248 chr13 32134730 32134940 + 6.60 0.000 intron (NM_023037, intron 8 of 60) intron (NM_023037, intron 8 of 60) 103061 NM_023037 10129 Hs.507669 NM_023037 ENSG00000073910 FRY 13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1 FRY microtubule binding protein protein-coding chr8-3489 chr8 102068129 102068339 + 6.60 0.000 intron (NM_001040624, intron 1 of 7) L2a|LINE|L2 56100 NM_001040624 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr5-6935 chr5 138585132 138585342 + 6.60 0.000 Intergenic Intergenic -9836 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr15-2840 chr15 40545430 40545640 + 6.60 0.000 intron (NM_001289132, intron 3 of 3) intron (NM_001289132, intron 3 of 3) -12985 NR_002208 359821 Hs.678598 NR_002208 MRPL42P5 - mitochondrial ribosomal protein L42 pseudogene 5 pseudo chr4-7656 chr4 85318655 85318865 + 6.60 0.000 Intergenic MER61-int|LTR|ERV1 -156390 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr8-6794 chr8 95238714 95238924 + 6.60 0.000 Intergenic Intergenic -22445 NR_046232 619344 Hs.741630 NR_046232 ENSG00000253351 LINC01298 C8orf69 long intergenic non-protein coding RNA 1298 ncRNA chr13-1635 chr13 56248450 56248660 + 6.60 0.000 Intergenic L1M1|LINE|L1 -892363 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr2-8624 chr2 143976667 143976877 + 6.60 0.000 intron (NM_001354353, intron 7 of 9) intron (NM_001354353, intron 7 of 9) 39705 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr6-7587 chr6 74328713 74328923 + 6.60 0.000 intron (NR_110856, intron 1 of 3) L1MA4A|LINE|L1 259367 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr2-13152 chr2 119076857 119077067 + 6.60 0.000 Intergenic Intergenic 81789 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr15-3864 chr15 90180036 90180246 + 6.60 0.000 Intergenic L1MD2|LINE|L1 -4779 NM_001324029 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr6-7095 chr6 34156900 34157110 + 6.60 0.000 Intergenic L1ME3A|LINE|L1 -1383 NM_001256809 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chrX-2485 chrX 87630839 87631049 + 6.60 0.000 intron (NM_057162, intron 6 of 10) LTR9A1|LTR|ERV1 113142 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr10-5758 chr10 103319153 103319363 + 6.60 0.000 intron (NM_001011663, intron 8 of 9) AluSc8|SINE|Alu 31882 NM_032154 84108 Hs.335808 NM_032154 ENSG00000156374 PCGF6 MBLR|RNF134 polycomb group ring finger 6 protein-coding chr7-9706 chr7 155571149 155571359 + 6.60 0.000 promoter-TSS (NM_001369813) promoter-TSS (NM_001369813) -508 NM_001369813 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr11-5822 chr11 8071048 8071258 + 6.60 0.000 intron (NM_003320, intron 2 of 12) intron (NM_003320, intron 2 of 12) -10209 NM_177972 7275 Hs.568986 NM_003320 ENSG00000166402 TUB RDOB|rd5 TUB bipartite transcription factor protein-coding chr1-13480 chr1 3664646 3664856 + 6.60 0.000 intron (NM_001204185, intron 1 of 12) intron (NM_001204185, intron 1 of 12) 12186 NM_001204187 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr13-3731 chr13 40664208 40664418 + 6.60 0.000 intron (NM_002015, intron 1 of 2) intron (NM_002015, intron 1 of 2) 2328 NM_002015 2308 Hs.370666 NM_002015 ENSG00000150907 FOXO1 FKH1|FKHR|FOXO1A forkhead box O1 protein-coding chr17-4686 chr17 28300945 28301155 + 6.60 0.000 intron (NR_028334, intron 2 of 2) intron (NR_028334, intron 2 of 2) 6332 NR_028334 284085 Hs.371796 NM_173624 ENSG00000265480 KRT18P55 - keratin 18 pseudogene 55 pseudo chr3-10952 chr3 176564451 176564661 + 6.60 0.000 Intergenic Intergenic 49453 NR_107017 102465858 NR_107017 ENSG00000283333 MIR7977 hsa-mir-7977 microRNA 7977 ncRNA chr1-10233 chr1 115829244 115829454 + 6.60 0.000 Intergenic Intergenic 11354 NM_001111061 4808 Hs.46296 NM_005599 ENSG00000177551 NHLH2 HEN2|NSCL2|bHLHa34 nescient helix-loop-helix 2 protein-coding chrX-4505 chrX 65553124 65553334 + 6.60 0.000 promoter-TSS (NR_033742) promoter-TSS (NR_033742) -808 NR_033742 83957 Hs.652967 NR_033742 ENSG00000227942 FRMD8P1 - FERM domain containing 8 pseudogene 1 pseudo chr22-3408 chr22 36666260 36666470 + 6.60 0.000 intron (NM_006078, intron 1 of 3) AluJo|SINE|Alu 36493 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr5-3138 chr5 60674601 60674811 + 6.60 0.000 intron (NM_001145208, intron 2 of 9) intron (NM_001145208, intron 2 of 9) 25460 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr20-4014 chr20 36404065 36404275 + 6.60 0.000 intron (NM_001365621, intron 2 of 12) intron (NM_001365621, intron 2 of 12) -57298 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr8-6253 chr8 40892034 40892244 + 6.60 0.000 intron (NM_024645, intron 1 of 6) intron (NM_024645, intron 1 of 6) 5687 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr6-6765 chr6 3453662 3453872 + 6.60 0.000 intron (NM_015482, intron 1 of 9) intron (NM_015482, intron 1 of 9) -1936 NR_147844 643327 Hs.631820 NR_147844 LOC643327 - uncharacterized LOC643327 ncRNA chr9-3547 chr9 37858712 37858922 + 6.60 0.000 intron (NM_001286810, intron 5 of 6) Charlie15a|DNA|hAT-Charlie 45310 NM_033412 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chrX-4559 chrX 69591214 69591424 + 6.60 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -24794 NM_001005609 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr19-6449 chr19 16362923 16363133 + 6.60 0.000 intron (NM_001258375, intron 21 of 21) intron (NM_001258375, intron 21 of 21) 38202 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr11-10549 chr11 120821714 120821924 + 6.60 0.000 intron (NM_001282470, intron 5 of 19) intron (NM_001282470, intron 5 of 19) -2704 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chrX-1328 chrX 132999845 133000055 + 6.60 0.000 Intergenic Intergenic 28322 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding chrX-3583 chrX 75943295 75943505 + 6.60 0.000 Intergenic L1PB1|LINE|L1 -158146 NM_138703 139599 Hs.356869 NM_138703 ENSG00000186675 MAGEE2 HCA3 MAGE family member E2 protein-coding chr2-13471 chr2 146736652 146736862 + 6.60 0.000 Intergenic L2a|LINE|L2 149700 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr15-2645 chr15 72289760 72289970 + 6.60 0.000 intron (NM_052840, intron 5 of 12) CpG-8389 16450 NM_001172685 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr6-3681 chr6 153512260 153512470 + 6.60 0.000 Intergenic Intergenic -381083 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr17-8575 chr17 80192812 80193022 + 6.60 0.000 intron (NM_024110, intron 9 of 20) AluSx1|SINE|Alu 5117 NM_052819 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr3-10529 chr3 138729775 138729985 + 6.60 0.000 intron (NM_006219, intron 8 of 23) MLT2B4|LTR|ERVL -22259 NM_001256045 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr22-2786 chr22 41875209 41875419 + 6.60 0.000 intron (NR_103834, intron 5 of 21) intron (NR_103834, intron 5 of 21) -25630 NR_029507 407039 NR_029507 ENSG00000207932 MIR33A MIR33|MIRN33|MIRN33A|hsa-mir-33|hsa-mir-33a|miR-33|miRNA33A|mir-33a microRNA 33a ncRNA chr1-5642 chr1 25092294 25092504 + 6.60 0.000 Intergenic AluSx3|SINE|Alu 68896 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr2-10402 chr2 185821638 185821848 + 6.60 0.000 intron (NM_173651, intron 19 of 22) AluJb|SINE|Alu -21592 NR_144454 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA chr19-5084 chr19 53545316 53545526 + 6.60 0.000 intron (NM_001317113, intron 2 of 4) intron (NM_001317113, intron 2 of 4) 6633 NM_001253800 55422 Hs.185674 NM_018555 ENSG00000130844 ZNF331 RITA|ZNF361|ZNF463 zinc finger protein 331 protein-coding chr2-14425 chr2 222011191 222011401 + 6.60 0.000 Intergenic L3|LINE|CR1 -286851 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr7-8394 chr7 45376950 45377160 + 6.60 0.000 Intergenic L1MEg|LINE|L1 -197085 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr11-7335 chr11 64949032 64949242 + 6.60 0.000 intron (NM_001037225, intron 6 of 10) AluJr4|SINE|Alu -13244 NM_130769 170589 Hs.436119 NM_130769 ENSG00000149735 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone subunit alpha 2 protein-coding chr10-6534 chr10 69676197 69676407 + 6.60 0.000 Intergenic LTR33|LTR|ERVL 46055 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr4-5839 chr4 105594234 105594444 + 6.60 0.000 intron (NM_001242729, intron 2 of 13) intron (NM_001242729, intron 2 of 13) 32748 NR_046840 100874374 Hs.668908 NR_046840 ENSG00000249885 ARHGEF38-IT1 - ARHGEF38 intronic transcript 1 ncRNA chr6-5112 chr6 120215324 120215534 + 6.60 0.000 Intergenic Intergenic 200250 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr5-7322 chr5 16046215 16046425 + 6.60 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 111138 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr1-11507 chr1 152825306 152825516 + 6.60 0.000 Intergenic (ATAT)n|Simple_repeat|Simple_repeat -2062 NM_178348 353131 Hs.534645 NM_178348 ENSG00000186844 LCE1A LEP1 late cornified envelope 1A protein-coding chr1-15956 chr1 191420051 191420261 + 6.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -191658 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr7-8024 chr7 18874838 18875048 + 6.60 0.000 intron (NM_058176, intron 21 of 22) intron (NM_058176, intron 21 of 22) 242693 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr9-6968 chr9 106440871 106441081 + 6.60 0.000 Intergenic AluSq|SINE|Alu -159952 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr2-13794 chr2 173314096 173314306 + 6.60 0.000 Intergenic L1ME2|LINE|L1 -32165 NR_033882 339751 Hs.570083 NR_033882 ENSG00000238133 MAP3K20-AS1 MLK7-AS1 MAP3K20 antisense RNA 1 ncRNA chr11-9322 chr11 45933161 45933371 + 6.60 0.000 non-coding (NR_147890, exon 19 of 19) non-coding (NR_147890, exon 19 of 19) 10610 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr9-4029 chr9 87387888 87388098 + 6.60 0.000 Intergenic Intergenic -109235 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr16-6822 chr16 81136559 81136769 + 6.60 0.000 intron (NM_052892, intron 33 of 43) intron (NM_052892, intron 33 of 43) -40269 NR_033249 2653 Hs.546256 NM_004483 ENSG00000140905 GCSH GCE|NKH glycine cleavage system protein H protein-coding chr15-5231 chr15 96813844 96814054 + 6.60 0.000 Intergenic Intergenic 30514 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr10-7773 chr10 34936084 34936294 + 6.60 0.000 Intergenic L2a|LINE|L2 120421 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr8-6603 chr8 73584628 73584838 + 6.60 0.000 intron (NM_001164384, intron 9 of 10) intron (NM_001164384, intron 9 of 10) 162107 NM_001164380 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr2-12028 chr2 29123680 29123890 + 6.60 0.000 intron (NM_001287528, intron 2 of 14) intron (NM_001287528, intron 2 of 14) 8370 NM_001287527 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr7-4595 chr7 17298377 17298587 + 6.60 0.000 promoter-TSS (NM_001621) promoter-TSS (NM_001621) -170 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr3-9858 chr3 80040195 80040405 + 6.60 0.000 Intergenic Intergenic -272302 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr14-3986 chr14 34171517 34171727 + 6.60 0.000 Intergenic Helitron3Na_Mam|RC|Helitron -220548 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr4-4538 chr4 70265301 70265511 + 6.60 0.000 Intergenic L1MA1|LINE|L1 22790 NM_005212 1448 Hs.54415 NM_005212 ENSG00000171209 CSN3 CNS10|CSN10|CSNK|KCA casein kappa protein-coding chr4-8675 chr4 179829745 179829955 + 6.60 0.000 Intergenic ERVL-E-int|LTR|ERVL 1329299 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr13-3247 chr13 32125162 32125372 + 6.60 0.000 intron (NM_023037, intron 7 of 60) intron (NM_023037, intron 7 of 60) 93493 NM_023037 10129 Hs.507669 NM_023037 ENSG00000073910 FRY 13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1 FRY microtubule binding protein protein-coding chr11-7778 chr11 89380232 89380442 + 6.60 0.000 intron (NM_001143837, intron 14 of 20) L2|LINE|L2 110423 NM_001291929 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr19-3447 chr19 28727662 28727872 + 6.60 0.000 promoter-TSS (NR_110759) promoter-TSS (NR_110759) -73 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr14-4444 chr14 33307778 33307988 + 6.60 0.000 intron (NM_173159, intron 3 of 11) intron (NM_173159, intron 3 of 11) 369004 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr8-5773 chr8 142327467 142327677 + 6.60 0.000 intron (NM_001366903, intron 6 of 9) intron (NM_001366903, intron 6 of 9) 75610 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr21-744 chr21 41379547 41379757 + 6.60 0.000 intron (NM_002463, intron 3 of 13) intron (NM_002463, intron 3 of 13) 17625 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding chr8-5447 chr8 40749023 40749233 + 6.60 0.000 intron (NM_024645, intron 3 of 6) THE1B|LTR|ERVL-MaLR 148698 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr2-10518 chr2 230948172 230948382 + 6.60 0.000 Intergenic Intergenic -23035 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr14-5346 chr14 102960315 102960525 + 6.60 0.000 intron (NM_006035, intron 20 of 36) AluJr|SINE|Alu 37764 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr22-3866 chr22 33588988 33589198 + 6.60 0.000 intron (NM_133642, intron 5 of 14) intron (NM_133642, intron 5 of 14) 115827 NR_145833 109616998 NR_145833 ENSG00000253007 SNORA50B - small nucleolar RNA, H/ACA box 50B snoRNA chr6-5494 chr6 163419808 163420018 + 6.60 0.000 intron (NM_206853, intron 1 of 6) intron (NM_206853, intron 1 of 6) 5195 NM_006775 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr6-2224 chr6 44066237 44066447 + 6.60 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 8310 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr14-3899 chr14 98177669 98177879 + 6.60 0.000 Intergenic Intergenic -199650 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chrX-5273 chrX 139763416 139763626 + 6.60 0.000 intron (NM_001353812, intron 20 of 29) intron (NM_001353812, intron 20 of 29) -55299 NM_001099855 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr11-9138 chr11 33939140 33939350 + 6.60 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -47169 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr22-3392 chr22 33514061 33514271 + 6.60 0.000 intron (NM_133642, intron 6 of 14) Tigger3a|DNA|TcMar-Tigger -77497 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr3-7316 chr3 32646837 32647047 + 6.60 0.000 Intergenic Intergenic -38246 NM_001256741 25904 Hs.444851 NM_015442 ENSG00000182973 CNOT10 - CCR4-NOT transcription complex subunit 10 protein-coding chr4-8568 chr4 167372494 167372704 + 6.60 0.000 Intergenic MIR|SINE|MIR -138009 NM_001251967 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr10-8883 chr10 113597424 113597634 + 6.60 0.000 intron (NM_001322945, intron 35 of 40) UCON55|DNA|TcMar-Tigger 44476 NM_004132 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr2-6397 chr2 125701835 125702045 + 6.60 0.000 Intergenic L1MC5|LINE|L1 416045 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr17-7587 chr17 21248839 21249049 + 6.60 0.000 intron (NM_152914, intron 1 of 2) intron (NM_152914, intron 1 of 2) 4466 NM_152914 256302 Hs.654713 NM_152914 ENSG00000274180 NATD1 C17orf103|Gtlf3b N-acetyltransferase domain containing 1 protein-coding chrX-2325 chrX 56242307 56242517 + 6.60 0.000 intron (NM_001324099, intron 1 of 3) intron (NM_001324099, intron 1 of 3) 9254 NM_001324099 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr11-6585 chr11 72526204 72526414 + 6.60 0.000 Intergenic Intergenic -44347 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr13-3093 chr13 51071509 51071719 + 6.60 0.000 Intergenic Intergenic -5457 NR_003923 2974 Hs.411573 NM_004129 ENSG00000123201 GUCY1B2 GC-SB2 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) pseudo chr6-7437 chr6 54535004 54535214 + 6.60 0.000 Intergenic LTR81|LTR|Gypsy 226668 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr1-11951 chr1 68808253 68808463 + 6.60 0.000 Intergenic Intergenic -247540 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr12-4125 chr12 67010717 67010927 + 6.60 0.000 Intergenic L2a|LINE|L2 85462 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr17-8087 chr17 55394686 55394896 + 6.60 0.000 intron (NM_012329, intron 6 of 6) intron (NM_012329, intron 6 of 6) 27044 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr1-13800 chr1 18692069 18692279 + 6.60 0.000 intron (NM_001135254, intron 5 of 8) GA-rich|Low_complexity|Low_complexity 61328 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr10-4803 chr10 8094298 8094508 + 6.60 0.000 Intergenic Intergenic 39715 NM_001002295 2625 Hs.524134 NM_002051 ENSG00000107485 GATA3 HDR|HDRS GATA binding protein 3 protein-coding chr7-8506 chr7 53111124 53111334 + 6.60 0.000 Intergenic Intergenic 75596 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr4-5044 chr4 141842363 141842573 + 6.60 0.000 Intergenic LTR24|LTR|ERV1 205885 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr2-14509 chr2 227862899 227863109 + 6.60 0.000 Intergenic Intergenic -8372 NM_001330004 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr6-3070 chr6 74091262 74091472 + 6.60 0.000 intron (NR_110856, intron 1 of 3) LTR103b_Mam|LTR|ERV1? 21916 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr4-8109 chr4 125780391 125780601 + 6.60 0.000 Intergenic Intergenic 273237 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr7-8918 chr7 94781746 94781956 + 6.60 0.000 Intergenic MER67B|LTR|ERV1 125481 NM_001184962 23089 Hs.147492 NM_015068 ENSG00000242265 PEG10 EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1 paternally expressed 10 protein-coding chr17-3041 chr17 79600411 79600621 + 6.60 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 10535 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-13527 chr1 6217608 6217818 + 6.60 0.000 intron (NM_207396, intron 16 of 17) L2a|LINE|L2 11594 NM_207396 388591 Hs.716549 NM_173795 ENSG00000158286 RNF207 C1orf188 ring finger protein 207 protein-coding chr8-7036 chr8 112347138 112347348 + 6.60 0.000 intron (NM_001363185, intron 36 of 66) intron (NM_001363185, intron 36 of 66) -296250 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr1-15615 chr1 161950340 161950550 + 6.60 0.000 intron (NM_007348, intron 15 of 15) intron (NM_007348, intron 15 of 15) 74020 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr15-4947 chr15 78327761 78327971 + 6.60 0.000 Intergenic MIR3|SINE|MIR -12487 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr2-10122 chr2 64342913 64343123 + 6.60 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -2170 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr1-9652 chr1 47598484 47598694 + 6.60 0.000 Intergenic Intergenic -161272 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr12-7559 chr12 72485936 72486146 + 6.60 0.000 intron (NM_013381, intron 5 of 18) L1MA9|LINE|L1 -212532 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr1-10853 chr1 204628447 204628657 + 6.60 0.000 intron (NM_201630, intron 1 of 1) intron (NM_201630, intron 1 of 1) 57186 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr21-1865 chr21 42370848 42371058 + 6.60 0.000 TTS (NM_001256317) TTS (NM_001256317) -4418 NM_003225 7031 Hs.162807 NM_003225 ENSG00000160182 TFF1 BCEI|D21S21|HP1.A|HPS2|pNR-2|pS2 trefoil factor 1 protein-coding chr21-933 chr21 39562177 39562387 + 6.60 0.000 Intergenic MamGypsy2-I|LTR|Gypsy 50540 NR_026543 114041 Hs.375120 NM_153754 ENSG00000184809 B3GALT5-AS1 C21orf88 B3GALT5 antisense RNA 1 ncRNA chr12-4512 chr12 23326210 23326420 + 6.60 0.000 Intergenic THE1A|LTR|ERVL-MaLR 150679 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr14-3925 chr14 102952197 102952407 + 6.60 0.000 intron (NM_006035, intron 24 of 36) AluJr4|SINE|Alu 29646 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr5-5225 chr5 115977076 115977286 + 6.60 0.000 intron (NM_173800, intron 1 of 19) L1ME1|LINE|L1 14706 NM_173800 206338 Hs.98288 NM_173800 ENSG00000172901 LVRN APQ|AQPEP|TAQPEP laeverin protein-coding chr7-7889 chr7 6367887 6368097 + 6.60 0.000 Intergenic HAL1|LINE|L1 -6535 NM_018890 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|MRD48|Rac-1|TC-25|p21-Rac1 Rac family small GTPase 1 protein-coding chr2-11726 chr2 10486936 10487146 + 6.60 0.000 Intergenic Intergenic 37313 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr18-2867 chr18 9261878 9262088 + 6.60 0.000 intron (NM_001204056, intron 8 of 11) intron (NM_001204056, intron 8 of 11) -72790 NM_020648 57045 Hs.514685 NM_020648 ENSG00000128791 TWSG1 TSG twisted gastrulation BMP signaling modulator 1 protein-coding chr1-11162 chr1 237546437 237546647 + 6.60 0.000 intron (NM_001035, intron 25 of 104) AluSz6|SINE|Alu 75423 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr12-3124 chr12 32003084 32003294 + 6.60 0.000 Intergenic ERVL-E-int|LTR|ERVL 43774 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 RESF1 C12orf35|GET|KIAA1551|UTA2-1 retroelement silencing factor 1 protein-coding chr2-11606 chr2 2910044 2910254 + 6.60 0.000 intron (NR_110228, intron 5 of 6) intron (NR_110228, intron 5 of 6) 215877 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr1-10351 chr1 154379590 154379800 + 6.60 0.000 Intergenic SVA_F|Retroposon|SVA -25498 NM_001206866 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr20-3889 chr20 31411641 31411851 + 6.60 0.000 intron (NM_001171832, intron 1 of 1) intron (NM_001171832, intron 1 of 1) 1092 NM_001171832 245934 Hs.272294 NM_001011878 ENSG00000204548 DEFB121 DEFB21|ESC42RELC defensin beta 121 protein-coding chr15-2455 chr15 80455505 80455715 + 6.60 0.000 intron (NM_014862, intron 2 of 18) MER81|DNA|hAT-Blackjack 51228 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr14-2856 chr14 30691306 30691516 + 6.60 0.000 intron (NM_016106, intron 14 of 24) intron (NM_016106, intron 14 of 24) 69092 NM_001257376 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr5-4245 chr5 135603454 135603664 + 6.60 0.000 intron (NM_001349335, intron 1 of 10) intron (NM_001349335, intron 1 of 10) -24280 NM_004887 9547 Hs.483444 NM_004887 ENSG00000145824 CXCL14 BMAC|BRAK|KEC|KS1|MIP-2g|MIP2G|NJAC|SCYB14 C-X-C motif chemokine ligand 14 protein-coding chr2-13020 chr2 107992815 107993025 + 6.60 0.000 intron (NM_021815, intron 3 of 8) intron (NM_021815, intron 3 of 8) 6396 NM_001305007 60482 Hs.287758 NM_021815 ENSG00000115665 SLC5A7 CHT|CHT1|CMS20|HMN7A solute carrier family 5 member 7 protein-coding chr15-2991 chr15 53729076 53729286 + 6.60 0.000 intron (NM_182758, intron 2 of 19) L2b|LINE|L2 30482 NM_182758 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr1-14362 chr1 42371490 42371700 + 6.60 0.000 Intergenic Intergenic -9197 NM_173642 284716 Hs.420244 NM_173642 ENSG00000177181 RIMKLA FAM80A|NAAGS|NAAGS-II ribosomal modification protein rimK like family member A protein-coding chr7-6284 chr7 138011736 138011946 + 6.60 0.000 Intergenic AluJb|SINE|Alu -9755 NM_001253775 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr18-3365 chr18 58455913 58456123 + 6.60 0.000 Intergenic Intergenic -4866 NR_039899 100616357 NR_039899 ENSG00000207778 MIR3591 - microRNA 3591 ncRNA chr1-13549 chr1 7041825 7042035 + 6.60 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 256476 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr2-9225 chr2 218137685 218137895 + 6.60 0.000 TTS (NM_001557) TTS (NM_001557) 11762 NM_001557 3579 Hs.846 NM_001557 ENSG00000180871 CXCR2 CD182|CDw128b|CMKAR2|IL8R2|IL8RA|IL8RB C-X-C motif chemokine receptor 2 protein-coding chr3-7462 chr3 133742875 133743085 + 6.60 0.000 intron (NM_001354703, intron 7 of 22) intron (NM_001354703, intron 7 of 22) -3413 NM_001354704 7018 Hs.518267 NM_001063 ENSG00000091513 TF HEL-S-71p|PRO1557|PRO2086|TFQTL1 transferrin protein-coding chr10-7368 chr10 2006206 2006416 + 6.60 0.000 non-coding (NR_040253, exon 3 of 3) non-coding (NR_040253, exon 3 of 3) 8037 NR_040253 282980 Hs.576810 NR_040253 ENSG00000234962 LINC00700 - long intergenic non-protein coding RNA 700 ncRNA chr13-4094 chr13 78059552 78059762 + 6.60 0.000 intron (NR_047001, intron 1 of 5) LTR17|LTR|ERV1 4802 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr19-4989 chr19 46729951 46730161 + 6.60 0.000 intron (NM_001039877, intron 6 of 17) intron (NM_001039877, intron 6 of 17) -12929 NM_001079880 25865 Hs.466987 NM_016457 ENSG00000105287 PRKD2 HSPC187|PKD2|nPKC-D2 protein kinase D2 protein-coding chrX-3706 chrX 112944966 112945176 + 6.60 0.000 Intergenic Intergenic -97656 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr15-5219 chr15 96409471 96409681 + 6.60 0.000 Intergenic CpG 75811 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr3-9717 chr3 66714737 66714947 + 6.60 0.000 Intergenic AluY|SINE|Alu 23494 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr10-4005 chr10 209428 209638 + 6.60 0.000 intron (NM_001370123, intron 3 of 12) intron (NM_001370123, intron 3 of 12) 29539 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr2-10355 chr2 165829425 165829635 + 6.60 0.000 Intergenic L2c|LINE|L2 -35283 NM_004482 2591 Hs.170986 NM_004482 ENSG00000115339 GALNT3 GalNAc-T3|HFTC|HFTC1|HHS polypeptide N-acetylgalactosaminyltransferase 3 protein-coding chr1-12966 chr1 154053905 154054115 + 6.60 0.000 intron (NM_001159484, intron 25 of 37) intron (NM_001159484, intron 25 of 37) 50582 NR_049883 100847024 NR_049883 ENSG00000263987 MIR5698 - microRNA 5698 ncRNA chr9-7317 chr9 11897845 11898055 + 6.60 0.000 Intergenic L1PA7|LINE|L1 -795435 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr3-8619 chr3 169172039 169172249 + 6.60 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -24673 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr4-7573 chr4 79076499 79076709 + 6.60 0.000 intron (NR_038342, intron 2 of 5) L1PA15|LINE|L1 104856 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA chr2-8528 chr2 130884356 130884566 + 6.60 0.000 intron (NM_001367493, intron 1 of 13) MIR|SINE|MIR 47547 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr7-4401 chr7 95718790 95719000 + 6.60 0.000 Intergenic Intergenic -53611 NM_001278422 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr4-4479 chr4 56466500 56466710 + 6.60 0.000 Intergenic Intergenic -1012 NM_006947 6731 Hs.237825 NM_006947 ENSG00000174780 SRP72 BMFF|BMFS1|HEL103 signal recognition particle 72 protein-coding chr4-8357 chr4 147816456 147816666 + 6.60 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) 33966 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr4-7462 chr4 70238389 70238599 + 6.60 0.000 Intergenic L2a|LINE|L2 -4122 NM_005212 1448 Hs.54415 NM_005212 ENSG00000171209 CSN3 CNS10|CSN10|CSNK|KCA casein kappa protein-coding chr6-2148 chr6 14031670 14031880 + 6.60 0.000 Intergenic Intergenic -85481 NM_001251901 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr14-2654 chr14 69752100 69752310 + 6.60 0.000 Intergenic AluJb|SINE|Alu -14937 NM_001039465 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr10-7603 chr10 20293198 20293408 + 6.60 0.000 Intergenic L1PA4|LINE|L1 -258667 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr18-3502 chr18 74014135 74014345 + 6.60 0.000 Intergenic Intergenic 133594 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr19-5841 chr19 42015698 42015908 + 6.60 0.000 intron (NM_002088, intron 14 of 18) intron (NM_002088, intron 14 of 18) -21573 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr15-2389 chr15 58993863 58994073 + 6.60 0.000 intron (NM_001270530, intron 1 of 13) intron (NM_001270530, intron 1 of 13) 5822 NM_001270530 54778 Hs.404423 NM_017610 ENSG00000157450 RNF111 ARK|hRNF111 ring finger protein 111 protein-coding chr2-10443 chr2 206761419 206761629 + 6.60 0.000 intron (NR_104261, intron 1 of 9) L2|LINE|L2 3804 NR_104261 130752 Hs.147816 NM_206892 ENSG00000138400 MDH1B RP11-95H11 malate dehydrogenase 1B protein-coding chr3-11119 chr3 186486961 186487171 + 6.60 0.000 intron (NR_033844, intron 2 of 7) intron (NR_033844, intron 2 of 7) 6595 NR_033844 253573 Hs.97386 NR_033844 ENSG00000224406 LINC02052 - long intergenic non-protein coding RNA 2052 ncRNA chr17-4567 chr17 81271474 81271684 + 6.60 0.000 intron (NM_001037984, intron 9 of 15) intron (NM_001037984, intron 9 of 15) 23728 NM_138570 124565 Hs.352240 NM_138570 ENSG00000157637 SLC38A10 PP1744 solute carrier family 38 member 10 protein-coding chr2-10238 chr2 112595749 112595959 + 6.60 0.000 Intergenic AluSc|SINE|Alu 11000 NM_001304354 84269 Hs.375707 NM_032309 ENSG00000125611 CHCHD5 C2orf9|CHTM1|MIC14|MIX14 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding chr14-4329 chr14 22789062 22789272 + 6.60 0.000 intron (NM_001126105, intron 3 of 10) L3|LINE|CR1 22479 NM_005015 5018 Hs.151134 NM_005015 ENSG00000155463 OXA1L OXA1 OXA1L mitochondrial inner membrane protein protein-coding chr9-7286 chr9 8234492 8234702 + 6.60 0.000 Intergenic Intergenic -434819 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr11-5886 chr11 12219515 12219725 + 6.60 0.000 intron (NR_144420, intron 8 of 27) intron (NR_144420, intron 8 of 27) 55937 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr22-2770 chr22 41232787 41232997 + 6.60 0.000 intron (NM_138481, intron 5 of 5) intron (NM_138481, intron 5 of 5) 8039 NM_138481 150356 Hs.344488 NM_138481 ENSG00000100399 CHADL SLRR4B chondroadherin like protein-coding chr8-5863 chr8 13608016 13608226 + 6.60 0.000 Intergenic LTR13A|LTR|ERVK -3501 NM_001348082 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr17-5326 chr17 28444398 28444608 + 6.60 0.000 Intergenic Intergenic -29141 NM_001145975 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr16-4993 chr16 12455286 12455496 + 6.60 0.000 intron (NM_032167, intron 18 of 20) intron (NM_032167, intron 18 of 20) -264930 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr22-3799 chr22 29947711 29947921 + 6.60 0.000 intron (NM_153051, intron 1 of 18) intron (NM_153051, intron 1 of 18) -59233 NR_106876 102466742 NR_106876 ENSG00000275818 MIR6818 hsa-mir-6818 microRNA 6818 ncRNA chr13-2232 chr13 24843461 24843671 + 6.60 0.000 intron (NM_031277, intron 19 of 35) L1ME1|LINE|L1 79295 NR_047594 55835 Hs.513379 NM_018451 ENSG00000151849 CENPJ BM032|CENP-J|CPAP|LAP|LIP1|MCPH6|SASS4|SCKL4|Sas-4 centromere protein J protein-coding chr3-9729 chr3 67456456 67456666 + 6.60 0.000 intron (NM_001177599, intron 9 of 10) intron (NM_001177599, intron 9 of 10) 198053 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr5-8727 chr5 144763453 144763663 + 6.60 0.000 Intergenic MIR3|SINE|MIR 558167 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr2-10000 chr2 21072693 21072903 + 6.60 0.000 Intergenic Intergenic -28725 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr1-3720 chr1 219298883 219299093 + 6.60 0.000 Intergenic Intergenic 124019 NM_001300772 127018 Hs.657617 NM_138794 ENSG00000143353 LYPLAL1 Q96AV0 lysophospholipase like 1 protein-coding chr20-4109 chr20 41308393 41308603 + 6.60 0.000 Intergenic Intergenic -8378 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr12-6990 chr12 30356266 30356476 + 6.60 0.000 Intergenic Intergenic 320873 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chrX-4644 chrX 79133812 79134022 + 6.60 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -37055 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr5-5449 chr5 138426559 138426769 + 6.60 0.000 intron (NM_016604, intron 17 of 23) AluSx1|SINE|Alu -12393 NM_016606 51308 Hs.416090 NM_016606 ENSG00000132563 REEP2 C5orf19|SGC32445|SPG72|Yip2d receptor accessory protein 2 protein-coding chr2-10427 chr2 199747398 199747608 + 6.60 0.000 Intergenic Intergenic 103670 NM_001350853 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding chr8-4925 chr8 101088543 101088753 + 6.60 0.000 Intergenic L1ME4b|LINE|L1 36594 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr9-7382 chr9 18213221 18213431 + 6.60 0.000 Intergenic Intergenic -260827 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr19-7049 chr19 51606084 51606294 + 6.60 0.000 Intergenic Intergenic -11809 NR_034159 729975 Hs.716785 NR_034159 LINC01530 - long intergenic non-protein coding RNA 1530 ncRNA chr7-8540 chr7 55716249 55716459 + 6.60 0.000 Intergenic AluSx3|SINE|Alu -11787 NR_003949 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr19-7076 chr19 55401917 55402127 + 6.60 0.000 TTS (NR_145781) TTS (NR_145781) 635 NR_145781 109623451 NR_145781 SNORD157 - small nucleolar RNA, C/D box 157 snoRNA chr16-4712 chr16 82297804 82298014 + 6.60 0.000 Intergenic Intergenic -127685 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr18-1886 chr18 28835705 28835915 + 6.60 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -658680 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr3-8471 chr3 124852254 124852464 + 6.60 0.000 intron (NM_001354766, intron 3 of 13) intron (NM_001354766, intron 3 of 13) 35006 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr7-4282 chr7 14497537 14497747 + 6.60 0.000 intron (NM_001350717, intron 19 of 24) intron (NM_001350717, intron 19 of 24) 343808 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr2-6407 chr2 130818296 130818506 + 6.60 0.000 Intergenic AluSx|SINE|Alu -18513 NM_015320 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr5-7915 chr5 77406490 77406700 + 6.60 0.000 intron (NM_001029851, intron 9 of 18) intron (NM_001029851, intron 9 of 18) 85721 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr15-4718 chr15 67401014 67401224 + 6.60 0.000 intron (NM_001031715, intron 14 of 20) intron (NM_001031715, intron 14 of 20) 119854 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr1-9077 chr1 15834311 15834521 + 6.60 0.000 non-coding (NR_024279, exon 2 of 2) non-coding (NR_024279, exon 2 of 2) -13291 NM_015001 23013 Hs.744843 NM_015001 ENSG00000065526 SPEN HIAA0929|MINT|RBM15C|SHARP spen family transcriptional repressor protein-coding chr1-12572 chr1 30965899 30966109 + 6.60 0.000 exon (NM_014676, exon 13 of 22) exon (NM_014676, exon 13 of 22) 2233 NR_003066 692200 NR_003066 SNORD103C HBII-251|SNORD85 small nucleolar RNA, C/D box 103C snoRNA chrX-3697 chrX 110578199 110578409 + 6.60 0.000 Intergenic Intergenic 57992 NR_002718 6998 Hs.592361 NR_002718 ENSG00000225366 TDGF1P3 CR-3|CRIPTO|CRIPTO-3|CRIPTO3|TDGF1|TDGF2|TDGF3 teratocarcinoma-derived growth factor 1 pseudogene 3 pseudo chr9-7481 chr9 29079538 29079748 + 6.60 0.000 intron (NM_001354574, intron 1 of 5) intron (NM_001354574, intron 1 of 5) 132656 NM_001354575 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr9-4986 chr9 20706040 20706250 + 6.60 0.000 intron (NM_017794, intron 3 of 45) AluJr|SINE|Alu -9960 NR_030166 574444 NR_030166 ENSG00000207609 MIR491 MIRN491|hsa-mir-491|mir-491 microRNA 491 ncRNA chr14-4376 chr14 27151267 27151477 + 6.60 0.000 Intergenic L1PA16|LINE|L1 242730 NR_036193 100423019 NR_036193 ENSG00000265165 MIR4307 - microRNA 4307 ncRNA chr8-5145 chr8 76140959 76141169 + 6.60 0.000 Intergenic AluJb|SINE|Alu -265590 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr12-6856 chr12 16692230 16692440 + 6.60 0.000 Intergenic L2a|LINE|L2 -84121 NR_045013 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding chr1-16548 chr1 233556768 233556978 + 6.60 0.000 Intergenic HAL1|LINE|L1 -57233 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr15-4246 chr15 33447458 33447668 + 6.60 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 136596 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr18-856 chr18 28176345 28176555 + 6.60 0.000 intron (NM_001792, intron 1 of 15) CpG 680 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr19-6869 chr19 44833755 44833965 + 6.60 0.000 Intergenic AluJb|SINE|Alu -12437 NM_001042724 5819 Hs.655455 NM_002856 ENSG00000130202 NECTIN2 CD112|HVEB|PRR2|PVRL2|PVRR2 nectin cell adhesion molecule 2 protein-coding chr16-6587 chr16 66921202 66921412 + 6.60 0.000 TTS (NM_004165) TTS (NM_004165) -2422 NM_001204746 1014 Hs.513660 NM_004062 ENSG00000166589 CDH16 - cadherin 16 protein-coding chr8-6152 chr8 31210253 31210463 + 6.60 0.000 Intergenic MER51A|LTR|ERV1 -177002 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr19-5173 chr19 8705542 8705752 + 6.60 0.000 Intergenic LTR47B2|LTR|ERVL -6852 NM_178525 284382 Hs.209206 NM_178525 ENSG00000181786 ACTL9 HSD21 actin like 9 protein-coding chr16-6693 chr16 70392296 70392506 + 6.60 0.000 intron (NM_006927, intron 3 of 6) intron (NM_006927, intron 3 of 6) 45498 NM_018332 55308 Hs.656037 NM_018332 ENSG00000168872 DDX19A DDX19-DDX19L|DDX19L DEAD-box helicase 19A protein-coding chr1-5698 chr1 55584991 55585201 + 6.60 0.000 Intergenic Intergenic 359455 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr12-7280 chr12 52628756 52628966 + 6.60 0.000 Intergenic Intergenic -10302 NM_175068 319101 Hs.55410 NM_175068 ENSG00000186049 KRT73 IRT6IRS3|K6IRS3|KRT6IRS3 keratin 73 protein-coding chr17-6662 chr17 74503092 74503302 + 6.60 0.000 Intergenic Intergenic 28278 NM_174892 124599 Hs.313343 NM_174892 ENSG00000178789 CD300LB CD300b|CLM-7|CLM7|CMRF35-A2|IREM-3|IREM3|TREM-5|TREM5 CD300 molecule like family member b protein-coding chr5-6157 chr5 44610413 44610623 + 6.60 0.000 Intergenic Intergenic -100236 NR_131946 102723839 Hs.561412 NR_131946 LINC02224 BRCAT107 long intergenic non-protein coding RNA 2224 ncRNA chr12-2157 chr12 120237916 120238126 + 6.60 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 12142 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr13-2515 chr13 59520263 59520473 + 6.60 0.000 Intergenic Intergenic -492350 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr8-4070 chr8 65928326 65928536 + 6.60 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -86367 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chr13-3443 chr13 106104318 106104528 + 6.60 0.000 Intergenic Intergenic -272141 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr3-6449 chr3 105195339 105195549 + 6.60 0.000 Intergenic Intergenic -171269 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr10-6401 chr10 6604039 6604249 + 6.60 0.000 Intergenic Intergenic -14572 NR_120634 101928150 Hs.576825 NR_120634 LINC02648 - long intergenic non-protein coding RNA 2648 ncRNA chr17-7680 chr17 30955351 30955561 + 6.60 0.000 intron (NR_144488, intron 8 of 9) AluSg|SINE|Alu -15583 NM_001184992 84282 Hs.29874 NM_032322 ENSG00000181481 RNF135 L13|MMFD|REUL|Riplet ring finger protein 135 protein-coding chr4-5651 chr4 8539061 8539271 + 6.60 0.000 Intergenic MIRb|SINE|MIR -41071 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr3-4862 chr3 161427150 161427360 + 6.60 0.000 non-coding (NR_102265, exon 1 of 4) non-coding (NR_102265, exon 1 of 4) 828 NR_102265 101243545 Hs.737526 NR_102265 ENSG00000240567 LINC02067 - long intergenic non-protein coding RNA 2067 ncRNA chr3-9203 chr3 37040536 37040746 + 6.60 0.000 intron (NM_001167617, intron 14 of 18) intron (NM_001167617, intron 14 of 18) 47291 NM_001354626 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding chr7-9743 chr7 158113170 158113380 + 6.60 0.000 intron (NM_130842, intron 8 of 21) intron (NM_130842, intron 8 of 21) 258690 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr3-7837 chr3 111335474 111335684 + 6.60 0.000 Intergenic L3|LINE|CR1 -206618 NM_198196 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr15-2625 chr15 67805123 67805333 + 6.60 0.000 intron (NM_001206804, intron 21 of 21) intron (NM_001206804, intron 21 of 21) -20281 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr12-8230 chr12 124265974 124266184 + 6.60 0.000 intron (NM_001347902, intron 3 of 4) (ACAA)n|Simple_repeat|Simple_repeat -23085 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr3-4016 chr3 64210236 64210446 + 6.60 0.000 intron (NM_001370528, intron 1 of 7) intron (NM_001370528, intron 1 of 7) 15125 NM_198859 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr15-1938 chr15 93552894 93553104 + 6.60 0.000 Intergenic AluSc|SINE|Alu -303561 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr4-7684 chr4 87619933 87620143 + 6.60 0.000 Intergenic Intergenic 11509 NM_014208 1834 Hs.678914 NM_014208 ENSG00000152591 DSPP DFNA39|DGI1|DMP3|DPP|DSP dentin sialophosphoprotein protein-coding chr7-6222 chr7 131541502 131541712 + 6.60 0.000 intron (NM_001018111, intron 1 of 8) AluSg7|SINE|Alu 15021 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr19-5820 chr19 40305518 40305728 + 6.60 0.000 Intergenic Intergenic -20278 NM_001243028 208 Hs.631535 NM_001626 ENSG00000105221 AKT2 HIHGHH|PKBB|PKBBETA|PRKBB|RAC-BETA AKT serine/threonine kinase 2 protein-coding chr2-11144 chr2 141848580 141848790 + 6.60 0.000 intron (NM_018557, intron 1 of 90) intron (NM_018557, intron 1 of 90) 283016 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr12-7327 chr12 55001716 55001926 + 6.60 0.000 Intergenic L2a|LINE|L2 -17059 NM_001351149 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|ITPRID3|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr8-5961 chr8 20644315 20644525 + 6.60 0.000 Intergenic L1MB3|LINE|L1 -29494 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr5-6849 chr5 116766587 116766797 + 6.60 0.000 Intergenic Intergenic -4483 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr7-8117 chr7 26655913 26656123 + 6.60 0.000 Intergenic Intergenic 18147 NR_161201 285941 Hs.413394 NR_161201 C7orf71 - chromosome 7 open reading frame 71 ncRNA chr5-5134 chr5 104116187 104116397 + 6.60 0.000 Intergenic MER54B|LTR|ERVL -553503 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr14-3146 chr14 68873498 68873708 + 6.60 0.000 TTS (NM_001130004) TTS (NM_001130004) -77360 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr2-9854 chr2 177166333 177166543 + 6.60 0.000 Intergenic Intergenic 45973 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr8-4897 chr8 80709572 80709782 + 6.60 0.000 intron (NM_001033723, intron 2 of 8) LTR16B1|LTR|ERVL 164791 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr15-4881 chr15 76036085 76036295 + 6.60 0.000 Intergenic MamRep605|LTR?|LTR? -23766 NM_138573 145957 Hs.732438 NM_138573 ENSG00000169752 NRG4 HRG4 neuregulin 4 protein-coding chr1-10551 chr1 171855318 171855528 + 6.60 0.000 intron (NM_001278252, intron 1 of 14) L1PREC2|LINE|L1 -8769 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 - DNM3 intronic transcript 1 ncRNA chr9-8041 chr9 96031680 96031890 + 6.60 0.000 Intergenic Intergenic -9974 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092 long intergenic non-protein coding RNA 92 ncRNA chr11-4703 chr11 66384790 66385000 + 6.60 0.000 Intergenic L1MC3|LINE|L1 -12419 NM_001300868 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chrX-4594 chrX 72457916 72458126 + 6.60 0.000 intron (NR_051952, intron 8 of 9) intron (NR_051952, intron 8 of 9) 114822 NM_018486 55869 Hs.310536 NM_018486 ENSG00000147099 HDAC8 CDA07|CDLS5|HD8|HDACL1|KDAC8|MRXS6|RPD3|WTS histone deacetylase 8 protein-coding chr1-16260 chr1 211874941 211875151 + 6.60 0.000 Intergenic Intergenic 44085 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr2-11828 chr2 18763437 18763647 + 6.60 0.000 Intergenic Intergenic -173962 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr10-5312 chr10 70709013 70709223 + 6.60 0.000 intron (NM_080722, intron 4 of 21) intron (NM_080722, intron 4 of 21) 36612 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr9-5724 chr9 126010866 126011076 + 6.60 0.000 Intergenic Intergenic 262788 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr16-5263 chr16 52458838 52459048 + 6.60 0.000 intron (NM_001146188, intron 4 of 7) intron (NM_001146188, intron 4 of 7) 88200 NM_001080430 27324 Hs.132574 NM_001080430 ENSG00000103460 TOX3 CAGF9|TNRC9 TOX high mobility group box family member 3 protein-coding chr8-2622 chr8 62248979 62249189 + 6.60 0.000 non-coding (NR_130764, exon 1 of 7) non-coding (NR_130764, exon 1 of 7) 230 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr7-9683 chr7 153092911 153093121 + 6.60 0.000 Intergenic AluSx1|SINE|Alu 319218 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr18-2716 chr18 67081067 67081277 + 6.60 0.000 promoter-TSS (NR_049809) promoter-TSS (NR_049809) -412 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr1-16637 chr1 239991734 239991944 + 6.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -15685 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chr2-5934 chr2 26720323 26720533 + 6.60 0.000 intron (NM_002246, intron 1 of 1) intron (NM_002246, intron 1 of 1) 27706 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr5-5052 chr5 91538091 91538301 + 6.60 0.000 Intergenic Intergenic -154879 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr18-2408 chr18 8451197 8451407 + 6.60 0.000 Intergenic Intergenic -84268 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr2-11680 chr2 7899832 7900042 + 6.60 0.000 promoter-TSS (NR_110256) promoter-TSS (NR_110256) -282 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr7-4399 chr7 94908529 94908739 + 6.60 0.000 intron (NM_017650, intron 1 of 15) intron (NM_017650, intron 1 of 15) 997 NM_017650 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr2-9956 chr2 2969691 2969901 + 6.60 0.000 intron (NR_110228, intron 3 of 6) L1PB1|LINE|L1 156230 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr11-7598 chr11 43409644 43409854 + 6.60 0.000 intron (NM_001307943, intron 15 of 19) intron (NM_001307943, intron 15 of 19) 50829 NM_018259 55761 Hs.191186 NM_018259 ENSG00000052841 TTC17 - tetratricopeptide repeat domain 17 protein-coding chr2-10686 chr2 25002461 25002671 + 6.60 0.000 intron (NR_034113, intron 2 of 2) intron (NR_034113, intron 2 of 2) 30454 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 - DNAJC27 antisense RNA 1 ncRNA chr7-6734 chr7 5362751 5362961 + 6.60 0.000 intron (NM_001080495, intron 11 of 29) intron (NM_001080495, intron 11 of 29) 60690 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr18-1802 chr18 12616239 12616449 + 6.60 0.000 intron (NM_020148, intron 2 of 15) intron (NM_020148, intron 2 of 15) 40388 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr14-4724 chr14 60010256 60010466 + 6.60 0.000 intron (NR_075071, intron 23 of 32) THE1B-int|LTR|ERVL-MaLR -81550 NM_022495 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chr2-10708 chr2 27283108 27283318 + 6.60 0.000 intron (NM_187841, intron 1 of 8) intron (NM_187841, intron 1 of 8) 784 NM_187841 57159 Hs.516036 NM_032546 ENSG00000138100 TRIM54 MURF|MURF-3|RNF30|muRF3 tripartite motif containing 54 protein-coding chr6-6684 chr6 166976310 166976520 + 6.60 0.000 Intergenic MIRc|SINE|MIR -19865 NM_003730 8635 Hs.529989 NM_003730 ENSG00000026297 RNASET2 RNASE6PL|bA514O12.3 ribonuclease T2 protein-coding chr2-8635 chr2 145085813 145086023 + 6.60 0.000 Intergenic Intergenic 417951 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr6-6486 chr6 114058793 114059003 + 6.60 0.000 intron (NM_153612, intron 1 of 1) intron (NM_153612, intron 1 of 1) 3979 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr4-4624 chr4 79431461 79431671 + 6.60 0.000 Intergenic Intergenic -23338 NM_033214 2712 Hs.98008 NM_033214 ENSG00000196475 GK2 GKP2|GKTA glycerol kinase 2 protein-coding chr3-7727 chr3 51830219 51830429 + 6.60 0.000 intron (NM_001207023, intron 6 of 6) intron (NM_001207023, intron 6 of 6) 3441 NM_001207023 401067 Hs.729443 NM_001085479 ENSG00000229972 IQCF3 - IQ motif containing F3 protein-coding chr16-4149 chr16 4752703 4752913 + 6.60 0.000 exon (NM_001303450, exon 6 of 7) exon (NM_001303450, exon 6 of 7) 14354 NM_021646 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr13-1750 chr13 110361668 110361878 + 6.60 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 20815 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr20-2274 chr20 3739834 3740044 + 6.60 0.000 intron (NM_001318322, intron 2 of 11) intron (NM_001318322, intron 2 of 11) 7254 NM_001197327 116835 Hs.516854 NM_052970 ENSG00000132622 HSPA12B C20orf60 heat shock protein family A (Hsp70) member 12B protein-coding chr1-13721 chr1 15440526 15440736 + 6.60 0.000 intron (NM_007272, intron 3 of 7) intron (NM_007272, intron 3 of 7) 2188 NM_007272 11330 Hs.631869 NM_007272 ENSG00000162438 CTRC CLCR|ELA4 chymotrypsin C protein-coding chr12-7410 chr12 57810727 57810937 + 6.60 0.000 exon (NM_006576, exon 5 of 19) exon (NM_006576, exon 5 of 19) 5237 NM_006576 10677 Hs.584854 NM_006576 ENSG00000135407 AVIL ADVIL|DOC6|p92 advillin protein-coding chr8-6841 chr8 98423665 98423875 + 6.60 0.000 Intergenic Intergenic -3188 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chrX-5301 chrX 142753196 142753406 + 6.60 0.000 Intergenic L1M7|LINE|L1 -272627 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr6-3341 chr6 18110845 18111055 + 6.60 0.000 Intergenic AluSq2|SINE|Alu 11727 NM_198586 378884 Hs.348351 NM_198586 ENSG00000187566 NHLRC1 EPM2A|EPM2B|MALIN|bA204B7.2 NHL repeat containing E3 ubiquitin protein ligase 1 protein-coding chr13-4163 chr13 87146348 87146558 + 6.60 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 234533 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr5-6225 chr5 79774525 79774735 + 6.60 0.000 intron (NM_153610, intron 9 of 12) intron (NM_153610, intron 9 of 12) 84794 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr3-10787 chr3 159052720 159052930 + 6.60 0.000 Intergenic THE1A|LTR|ERVL-MaLR -16427 NM_001197114 100505385 Hs.134665 NM_001197113 ENSG00000283154 IQCJ-SCHIP1 - IQCJ-SCHIP1 readthrough protein-coding chr10-6777 chr10 1492093 1492303 + 6.60 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -34432 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr17-7577 chr17 20381473 20381683 + 6.60 0.000 intron (NR_023380, intron 12 of 15) L1PA16|LINE|L1 -28938 NR_146076 347716 Hs.745055 NR_146076 USP32P3 - ubiquitin specific peptidase 32 pseudogene 3 pseudo chr1-15923 chr1 186303913 186304123 + 6.60 0.000 intron (NM_001127710, intron 3 of 9) intron (NM_001127710, intron 3 of 9) 7745 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr6-8000 chr6 116328873 116329083 + 6.60 0.000 intron (NR_136524, intron 1 of 4) MER97d|DNA|hAT-Tip100 -40841 NM_001322939 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr22-4114 chr22 43823819 43824029 + 6.60 0.000 TTS (NM_014351) TTS (NM_014351) -11619 NM_198856 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chrX-1907 chrX 138847513 138847723 + 6.60 0.000 intron (NM_001139498, intron 2 of 5) intron (NM_001139498, intron 2 of 5) 19937 NM_001139502 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr20-3382 chr20 35849382 35849592 + 6.60 0.000 intron (NM_016436, intron 4 of 17) intron (NM_016436, intron 4 of 17) 77472 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding chr7-7706 chr7 158795431 158795641 + 6.60 0.000 intron (NM_020728, intron 3 of 21) MER58C|DNA|hAT-Charlie 33973 NM_001367773 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr2-8826 chr2 170816657 170816867 + 6.60 0.000 promoter-TSS (NM_000817) promoter-TSS (NM_000817) 72 NM_013445 2571 Hs.420036 NM_000817 ENSG00000128683 GAD1 CPSQ1|GAD|SCP glutamate decarboxylase 1 protein-coding chrX-3063 chrX 110773499 110773709 + 6.60 0.000 intron (NR_159734, intron 2 of 12) AluY|SINE|Alu 22213 NM_001143983 91851 Hs.496587 NM_145234 ENSG00000101938 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin like 1 protein-coding chr9-6953 chr9 99626259 99626469 + 6.60 0.000 intron (NR_109802, intron 3 of 6) intron (NR_109802, intron 3 of 6) 193525 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr1-15935 chr1 186948939 186949149 + 6.60 0.000 intron (NM_024420, intron 12 of 17) intron (NM_024420, intron 12 of 17) 120095 NM_001311193 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr9-6595 chr9 126638071 126638281 + 6.60 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 23733 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr8-6333 chr8 50398178 50398388 + 6.60 0.000 intron (NR_135797, intron 3 of 20) intron (NR_135797, intron 3 of 20) 234152 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr17-6069 chr17 79848078 79848288 + 6.60 0.000 Intergenic Intergenic -8743 NM_003655 8535 Hs.405046 NM_003655 ENSG00000141582 CBX4 NBP16|PC2 chromobox 4 protein-coding chr8-7440 chr8 140792406 140792616 + 6.60 0.000 intron (NR_148037, intron 14 of 34) MER68|LTR|ERVL -59858 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr6-7454 chr6 55918189 55918399 + 6.60 0.000 Intergenic Intergenic -42704 NM_021073 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr7-6289 chr7 139005285 139005495 + 6.60 0.000 Intergenic MER41-int|LTR|ERV1 -24001 NM_020910 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr13-3112 chr13 66232276 66232486 + 6.60 0.000 Intergenic Intergenic 14131 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr2-7661 chr2 28642075 28642285 + 6.60 0.000 intron (NR_138141, intron 35 of 35) intron (NR_138141, intron 35 of 35) 75823 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr19-6551 chr19 19018930 19019140 + 6.60 0.000 intron (NR_147915, intron 4 of 11) intron (NR_147915, intron 4 of 11) 14482 NR_147913 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr8-7042 chr8 113144840 113145050 + 6.60 0.000 intron (NM_001363185, intron 4 of 66) L2a|LINE|L2 232207 NM_198124 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr10-6452 chr10 29767593 29767803 + 6.60 0.000 Intergenic L1ME2z|LINE|L1 -30762 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr4-3378 chr4 17949134 17949344 + 6.60 0.000 intron (NR_158563, intron 4 of 5) intron (NR_158563, intron 4 of 5) 72516 NR_136669 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr1-15573 chr1 159912477 159912687 + 6.60 0.000 Intergenic Intergenic 11152 NM_001277224 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr2-12399 chr2 54751001 54751211 + 6.60 0.000 intron (NM_001039753, intron 1 of 40) MamRep1527|LTR|LTR 26094 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr5-6238 chr5 86949985 86950195 + 6.60 0.000 Intergenic Intergenic 164864 NR_036243 100422887 NR_036243 ENSG00000265919 MIR4280 - microRNA 4280 ncRNA chr1-7381 chr1 26744684 26744894 + 6.60 0.000 intron (NM_139135, intron 4 of 19) intron (NM_139135, intron 4 of 19) -43174 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr2-8491 chr2 127417104 127417314 + 6.60 0.000 Intergenic Intergenic -1211 NM_000312 5624 Hs.224698 NM_000312 ENSG00000115718 PROC APC|PC|PROC1|THPH3|THPH4 protein C, inactivator of coagulation factors Va and VIIIa protein-coding chrX-5046 chrX 123158632 123158842 + 6.60 0.000 Intergenic AluJr|SINE|Alu -25506 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr3-10558 chr3 141081805 141082015 + 6.60 0.000 intron (NM_080862, intron 2 of 2) intron (NM_080862, intron 2 of 2) 30563 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr1-8393 chr1 77906056 77906266 + 6.60 0.000 intron (NM_001172309, intron 1 of 11) L2c|LINE|L2 -16622 NR_103535 374987 Hs.632414 NM_199343 ENSG00000235927 NEXN-AS1 C1orf118 NEXN antisense RNA 1 ncRNA chr16-4664 chr16 76477458 76477668 + 6.60 0.000 intron (NR_136213, intron 11 of 23) intron (NR_136213, intron 11 of 23) -157435 NR_110934 101928203 Hs.737035 NR_110934 ENSG00000250514 LINC02125 - long intergenic non-protein coding RNA 2125 ncRNA chr3-9254 chr3 39183816 39184026 + 6.60 0.000 exon (NM_001351377, exon 2 of 2) exon (NM_001351377, exon 2 of 2) 8674 NM_194293 165904 Hs.447868 NM_194293 ENSG00000168334 XIRP1 CMYA1|Xin xin actin binding repeat containing 1 protein-coding chr2-8527 chr2 130427732 130427942 + 6.60 0.000 non-coding (NR_046258, exon 1 of 6) non-coding (NR_046258, exon 1 of 6) 709 NR_046260 100216479 Hs.131740 NR_046258 FAR2P2 - fatty acyl-CoA reductase 2 pseudogene 2 pseudo chr17-8344 chr17 73575921 73576131 + 6.60 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 62343 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr6-3101 chr6 90403679 90403889 + 6.60 0.000 Intergenic MamRTE1|LINE|RTE-BovB 91042 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr10-7429 chr10 5960560 5960770 + 6.60 0.000 intron (NR_046362, intron 1 of 4) intron (NR_046362, intron 1 of 4) 8263 NM_001351096 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr15-4644 chr15 63836315 63836525 + 6.60 0.000 Intergenic Intergenic -2472 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding chr14-2384 chr14 45315480 45315690 + 6.60 0.000 Intergenic Intergenic -62383 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding chr6-7551 chr6 70879740 70879950 + 6.60 0.000 intron (NM_080742, intron 2 of 3) intron (NM_080742, intron 2 of 3) 77215 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr14-2750 chr14 101673916 101674126 + 6.60 0.000 Intergenic MER4A1|LTR|ERV1 -56416 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr3-7008 chr3 170857714 170857924 + 6.60 0.000 Intergenic L1MC5|LINE|L1 12376 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr6-4308 chr6 15340850 15341060 + 6.60 0.000 intron (NM_001267040, intron 1 of 17) intron (NM_001267040, intron 1 of 17) 92100 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr9-4302 chr9 121700787 121700997 + 6.60 0.000 intron (NM_032552, intron 3 of 16) intron (NM_032552, intron 3 of 16) -41893 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr17-5065 chr17 3569657 3569867 + 6.60 0.000 intron (NM_018727, intron 15 of 15) intron (NM_018727, intron 15 of 15) -11950 NM_001258205 162514 Hs.446255 NM_145068 ENSG00000167723 TRPV3 FNEPPK2|OLMS|VRL3 transient receptor potential cation channel subfamily V member 3 protein-coding chr1-12132 chr1 170758154 170758364 + 6.60 0.000 Intergenic Intergenic 94128 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr18-3238 chr18 48177255 48177465 + 6.60 0.000 intron (NM_001371285, intron 2 of 5) intron (NM_001371285, intron 2 of 5) 16566 NM_001371288 chr2-14584 chr2 232200169 232200379 + 6.60 0.000 intron (NR_046477, intron 8 of 18) MADE2|DNA|TcMar-Mariner 27621 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr9-7830 chr9 82768797 82769007 + 6.60 0.000 Intergenic L1MD2|LINE|L1 294240 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr11-9950 chr11 76648351 76648561 + 6.60 0.000 Intergenic Intergenic 21482 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr2-12677 chr2 75419321 75419531 + 6.60 0.000 Intergenic L1M4a1|LINE|L1 -104642 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr11-9082 chr11 30796852 30797062 + 6.60 0.000 Intergenic Intergenic 195729 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr2-9905 chr2 231256987 231257197 + 6.60 0.000 intron (NM_001352757, intron 9 of 19) AluSp|SINE|Alu 58461 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr6-7481 chr6 60685958 60686168 + 6.60 0.000 Intergenic Intergenic -888067 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr3-5811 chr3 28885524 28885734 + 6.60 0.000 Intergenic Intergenic 310351 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr13-4247 chr13 96834415 96834625 + 6.60 0.000 3' UTR (NM_153456, exon 2 of 2) 3' UTR (NM_153456, exon 2 of 2) 149652 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr8-2292 chr8 123212228 123212438 + 6.60 0.000 Intergenic Intergenic 3530 NR_039808 100616260 NR_039808 ENSG00000266324 MIR4663 - microRNA 4663 ncRNA chr7-8160 chr7 29341546 29341756 + 6.60 0.000 intron (NM_001293070, intron 2 of 13) intron (NM_001293070, intron 2 of 13) -132681 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr11-10601 chr11 124204116 124204326 + 6.60 0.000 Intergenic L1M1|LINE|L1 19005 NM_001355213 26497 Hs.538726 NM_001355213 ENSG00000197309 OR10D3 HTPCRX09|OR10D3P olfactory receptor family 10 subfamily D member 3 (putative) protein-coding chr12-5641 chr12 68830296 68830506 + 6.60 0.000 intron (NM_001145337, intron 8 of 10) intron (NM_001145337, intron 8 of 10) 21377 NM_001145337 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding chr9-6926 chr9 94879159 94879369 + 6.60 0.000 intron (NM_032823, intron 5 of 14) LTR8|LTR|ERV1 66290 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr4-6823 chr4 8085256 8085466 + 6.60 0.000 intron (NM_001130084, intron 4 of 19) intron (NM_001130084, intron 4 of 19) -13373 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr6-6101 chr6 150293413 150293623 + 6.60 0.000 Intergenic DNA1_Mam|DNA|TcMar -75494 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr10-4497 chr10 84997686 84997896 + 6.60 0.000 Intergenic Intergenic 201114 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr3-11066 chr3 184308004 184308214 + 6.60 0.000 intron (NM_002808, intron 19 of 20) intron (NM_002808, intron 19 of 20) -6386 NM_001194947 1981 Hs.433750 NM_004953 ENSG00000114867 EIF4G1 EIF-4G1|EIF4F|EIF4G|EIF4GI|P220|PARK18 eukaryotic translation initiation factor 4 gamma 1 protein-coding chr18-2656 chr18 48121511 48121721 + 6.60 0.000 intron (NM_001371291, intron 4 of 6) intron (NM_001371291, intron 4 of 6) 15532 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr11-5879 chr11 11582196 11582406 + 6.60 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 39704 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr13-3693 chr13 36700081 36700291 + 6.60 0.000 Intergenic L2a|LINE|L2 26166 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr7-8672 chr7 72320035 72320245 + 6.60 0.000 intron (NM_001363460, intron 1 of 5) AluSx1|SINE|Alu 17251 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr9-4458 chr9 23789852 23790062 + 6.60 0.000 intron (NM_001351456, intron 2 of 8) intron (NM_001351456, intron 2 of 8) 31352 NM_001351465 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding chr5-7894 chr5 75235733 75235943 + 6.60 0.000 intron (NM_001164443, intron 1 of 24) L1MEf|LINE|L1 1040 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr2-10366 chr2 170978977 170979187 + 6.60 0.000 Intergenic HERVH-int|LTR|ERV1 49829 NM_015530 26003 Hs.431317 NM_015530 ENSG00000115806 GORASP2 GOLPH6|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding chr1-15857 chr1 181546139 181546349 + 6.60 0.000 intron (NM_001205293, intron 3 of 47) intron (NM_001205293, intron 3 of 47) 62727 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chrX-1590 chrX 84556273 84556483 + 6.60 0.000 Intergenic L1PA5|LINE|L1 -53925 NM_144657 139324 Hs.559546 NM_144657 ENSG00000165259 HDX CXorf43|D030011N01Rik highly divergent homeobox protein-coding chr7-4666 chr7 37127173 37127383 + 6.60 0.000 intron (NM_001206480, intron 14 of 21) intron (NM_001206480, intron 14 of 21) 129482 NR_104120 100861514 Hs.627775 NR_104120 ENSG00000224101 ELMO1-AS1 - ELMO1 antisense RNA 1 ncRNA chr2-11575 chr2 1283170 1283380 + 6.60 0.000 intron (NM_018968, intron 14 of 16) intron (NM_018968, intron 14 of 16) -130186 NM_000547 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chr12-6040 chr12 111220758 111220968 + 6.60 0.000 intron (NM_015267, intron 3 of 21) AluJr|SINE|Alu -83279 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr2-11128 chr2 136127579 136127789 + 6.60 0.000 Intergenic Intergenic -9529 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr9-8476 chr9 123986674 123986884 + 6.60 0.000 Intergenic L2c|LINE|L2 22617 NR_135129 100505588 Hs.547168 NR_135129 ENSG00000236668 LOC100505588 - uncharacterized LOC100505588 ncRNA chr5-7594 chr5 42959623 42959833 + 6.60 0.000 Intergenic Intergenic 33605 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr10-7824 chr10 43376540 43376750 + 6.60 0.000 TTS (NM_001184963) TTS (NM_001184963) 5001 NM_001184963 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chrX-4794 chrX 99297612 99297822 + 6.60 0.000 Intergenic Intergenic 1112556 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr13-3999 chr13 68570184 68570394 + 6.60 0.000 Intergenic Intergenic 315036 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr4-8713 chr4 183135742 183135952 + 6.60 0.000 intron (NM_024949, intron 1 of 22) L1MEd|LINE|L1 36590 NM_024949 80014 Hs.333179 NM_024949 ENSG00000151718 WWC2 BOMB WW and C2 domain containing 2 protein-coding chr18-2401 chr18 5718348 5718558 + 6.60 0.000 Intergenic Intergenic -30366 NR_038839 645355 Hs.632356 NR_038839 ENSG00000261738 MIR3976HG LINC01469 MIR3976 host gene ncRNA chr11-10500 chr11 118679596 118679806 + 6.60 0.000 promoter-TSS (NM_001301065) promoter-TSS (NM_001301065) -51 NM_007180 11181 Hs.129712 NM_007180 ENSG00000118094 TREH TRE|TREA|TREHD trehalase protein-coding chr3-10865 chr3 168729238 168729448 + 6.60 0.000 intron (NR_021485, intron 6 of 15) L1MA4|LINE|L1 -172602 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA chr5-5685 chr5 160993777 160993987 + 6.60 0.000 Intergenic HERVL-int|LTR|ERVL -55256 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr3-4616 chr3 10779976 10780186 + 6.60 0.000 Intergenic Intergenic -15872 NR_027102 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA chr9-7992 chr9 93498850 93499060 + 6.60 0.000 intron (NM_001286722, intron 5 of 17) intron (NM_001286722, intron 5 of 17) -45354 NR_136229 158293 Hs.350364 NM_198841 ENSG00000188938 FAM120AOS C9orf10OS family with sequence similarity 120A opposite strand protein-coding chrX-2851 chrX 140178722 140178932 + 6.60 0.000 Intergenic Intergenic 87160 NM_001271560 389895 Hs.127679 NM_001271560 LOC389895 - chromosome 16 open reading frame 72-like protein-coding chr8-6347 chr8 52183003 52183213 + 6.60 0.000 intron (NM_014682, intron 8 of 25) MIRb|SINE|MIR -11254 NR_134310 101929341 Hs.147170 NR_134310 ENSG00000253551 LOC101929341 - uncharacterized LOC101929341 ncRNA chr21-1817 chr21 39714351 39714561 + 6.60 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -30951 NM_001080444 150084 Hs.422120 NM_001080444 ENSG00000183067 IGSF5 GSF5|JAM4 immunoglobulin superfamily member 5 protein-coding chr2-8290 chr2 103046342 103046552 + 6.60 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -62018 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr19-5931 chr19 49973368 49973578 + 6.60 0.000 intron (NR_145574, intron 8 of 8) intron (NR_145574, intron 8 of 8) 3809 NM_001348364 400709 Hs.568076 NM_001348364 SIGLEC16 SIGLECP16|Siglec-P16 sialic acid binding Ig like lectin 16 (gene/pseudogene) protein-coding chr2-13141 chr2 118317622 118317832 + 6.60 0.000 Intergenic Intergenic -131341 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr1-13297 chr1 232415584 232415794 + 6.60 0.000 intron (NM_020808, intron 16 of 20) intron (NM_020808, intron 16 of 20) 99919 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr1-15134 chr1 103101452 103101662 + 6.60 0.000 intron (NM_001854, intron 1 of 66) LFSINE_Vert|SINE|tRNA 6939 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr7-4661 chr7 33868311 33868521 + 6.60 0.000 Intergenic Intergenic -36499 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr1-10903 chr1 207884945 207885155 + 6.60 0.000 3' UTR (NM_001025109, exon 8 of 8) 3' UTR (NM_001025109, exon 8 of 8) 26075 NM_001773 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr4-5799 chr4 81786607 81786817 + 6.60 0.000 Intergenic Intergenic -314805 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr7-8832 chr7 85803865 85804075 + 6.60 0.000 Intergenic Intergenic 382848 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr3-8659 chr3 178429294 178429504 + 6.60 0.000 intron (NR_046786, intron 1 of 2) intron (NR_046786, intron 1 of 2) 10198 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr6-5007 chr6 109045199 109045409 + 6.60 0.000 intron (NM_014454, intron 1 of 9) L2c|LINE|L2 -35749 NM_001199933 27244 Hs.591336 NM_014454 ENSG00000080546 SESN1 PA26|SEST1 sestrin 1 protein-coding chr10-6887 chr10 33836242 33836452 + 6.60 0.000 Intergenic Intergenic -63667 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr3-6308 chr3 76209804 76210014 + 6.60 0.000 Intergenic Intergenic -424360 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr8-6527 chr8 67428627 67428837 + 6.60 0.000 intron (NM_020361, intron 9 of 10) AluSc8|SINE|Alu 84898 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr19-3617 chr19 56010604 56010814 + 6.60 0.000 intron (NM_153447, intron 3 of 14) AluSp|SINE|Alu 10983 NM_153447 126206 Hs.356872 NM_153447 ENSG00000171487 NLRP5 CLR19.8|MATER|NALP5|PAN11|PYPAF8 NLR family pyrin domain containing 5 protein-coding chr16-1135 chr16 75225359 75225569 + 6.60 0.000 promoter-TSS (NR_109777) promoter-TSS (NR_109777) -919 NR_109777 100506281 Hs.710310 NR_109777 ENSG00000240338 LOC100506281 - uncharacterized LOC100506281 ncRNA chr3-8698 chr3 186191447 186191657 + 6.60 0.000 intron (NM_001346, intron 21 of 24) L3|LINE|CR1 -82463 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr9-8247 chr9 110996899 110997109 + 6.60 0.000 intron (NM_001351397, intron 1 of 4) intron (NM_001351397, intron 1 of 4) 39776 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr12-5646 chr12 74193845 74194055 + 6.60 0.000 intron (NR_038300, intron 4 of 6) L1PA10|LINE|L1 98681 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr1-15604 chr1 161029974 161030184 + 6.60 0.000 Intergenic SVA_B|Retroposon|SVA 8885 NM_001113206 100131187 Hs.720030 NM_001113205 ENSG00000215845 TSTD1 KAT|TST thiosulfate sulfurtransferase like domain containing 1 protein-coding chr6-6810 chr6 6714716 6714926 + 6.60 0.000 Intergenic Intergenic -91995 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr19-3701 chr19 33212524 33212734 + 6.60 0.000 exon (NM_019849, exon 4 of 11) exon (NM_019849, exon 4 of 11) 13221 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr6-5467 chr6 159885879 159886089 + 6.60 0.000 Intergenic Alu|SINE|Alu -5004 NM_001366704 4142 Hs.99900 NM_002377 ENSG00000130368 MAS1 MAS|MGRA MAS1 proto-oncogene, G protein-coupled receptor protein-coding chr2-10106 chr2 58360502 58360712 + 6.60 0.000 Intergenic Intergenic 84730 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA chr1-14252 chr1 36703730 36703940 + 6.60 0.000 Intergenic Intergenic -220521 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr18-1830 chr18 22033850 22034060 + 6.60 0.000 Intergenic AluJo|SINE|Alu 135013 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA KI270832.1-3 KI270832.1 174084 174294 + 6.60 0.000 NA NA NA NA chr15-4748 chr15 69296460 69296670 + 6.60 0.000 Intergenic Intergenic -2347 NM_017705 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chr4-3857 chr4 128347689 128347899 + 6.60 0.000 Intergenic L1MB5|LINE|L1 -59981 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chr4-8301 chr4 143546206 143546416 + 6.60 0.000 intron (NM_003601, intron 19 of 23) intron (NM_003601, intron 19 of 23) -13161 NR_003675 441046 Hs.135705 NM_001011539 ENSG00000236296 GUSBP5 GYPELOC441046 GUSB pseudogene 5 pseudo chr3-9906 chr3 85685081 85685291 + 6.60 0.000 intron (NM_001256503, intron 2 of 9) MER5A1|DNA|hAT-Charlie -41296 NM_153184 253559 Hs.164578 NM_153184 ENSG00000175161 CADM2 IGSF4D|NECL3|Necl-3|SynCAM 2|synCAM2 cell adhesion molecule 2 protein-coding chr11-4748 chr11 101030864 101031074 + 6.60 0.000 non-coding (NR_073142, exon 7 of 7) non-coding (NR_073142, exon 7 of 7) 96695 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr18-3473 chr18 70346748 70346958 + 6.60 0.000 intron (NR_126336, intron 3 of 3) L1PA5|LINE|L1 -8673 NR_146458 102724895 NR_146458 LIVAR lnc18q22.2 liver cell viability associated lncRNA ncRNA chr13-3364 chr13 77947742 77947952 + 6.60 0.000 intron (NM_000115, intron 1 of 7) FLAM_A|SINE|Alu 27680 NM_000115 1910 Hs.82002 NM_000115 ENSG00000136160 EDNRB ABCDS|ET-B|ET-BR|ETB|ETB1|ETBR|ETRB|HSCR|HSCR2|WS4A endothelin receptor type B protein-coding chr2-13453 chr2 145094502 145094712 + 6.60 0.000 Intergenic MIRc|SINE|MIR 426640 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr10-7669 chr10 28178635 28178845 + 6.60 0.000 intron (NR_134518, intron 2 of 16) MIR|SINE|MIR 103383 NM_173496 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr2-12246 chr2 44277620 44277830 + 6.60 0.000 intron (NM_000341, intron 1 of 9) intron (NM_000341, intron 1 of 9) 2245 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding chrX-4131 chrX 27277501 27277711 + 6.60 0.000 Intergenic MER21-int|LTR|ERVL 185735 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr16-6697 chr16 70621605 70621815 + 6.60 0.000 intron (NM_152456, intron 1 of 6) LTR7|LTR|ERV1 -2282 NM_001172772 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr1-14761 chr1 68059942 68060152 + 6.60 0.000 intron (NR_040077, intron 2 of 9) L1PA13|LINE|L1 -8416 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding chr8-6666 chr8 80193382 80193592 + 6.60 0.000 Intergenic Intergenic -21923 NM_001025253 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr9-8538 chr9 126598490 126598700 + 6.60 0.000 Intergenic FLAM_A|SINE|Alu -15848 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr5-4881 chr5 66524124 66524334 + 6.60 0.000 Intergenic AluSc|SINE|Alu -12625 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr20-4376 chr20 57104657 57104867 + 6.60 0.000 Intergenic Intergenic -108934 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr1-13125 chr1 199687381 199687591 + 6.60 0.000 Intergenic Intergenic -340224 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr1-15988 chr1 196055257 196055467 + 6.60 0.000 intron (NR_146895, intron 3 of 3) L1MEc|LINE|L1 33353 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr16-6420 chr16 56138420 56138630 + 6.60 0.000 intron (NR_027078, intron 2 of 4) Charlie15a|DNA|hAT-Charlie 52569 NR_027078 283856 Hs.707433 NR_027078 ENSG00000246379 LOC283856 - uncharacterized LOC283856 ncRNA chr3-10238 chr3 122989471 122989681 + 6.60 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) 3697 NM_001256346 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr3-9013 chr3 19947843 19948053 + 6.60 0.000 promoter-TSS (NM_001330688) promoter-TSS (NM_001330688) 851 NM_004162 5868 Hs.475663 NM_004162 ENSG00000144566 RAB5A RAB5 RAB5A, member RAS oncogene family protein-coding chr14-4489 chr14 36557986 36558196 + 6.60 0.000 Intergenic MER1A|DNA|hAT-Charlie 24523 NM_014360 26257 Hs.234763 NM_014360 ENSG00000136327 NKX2-8 NKX2.8|NKX2H|Nkx2-9 NK2 homeobox 8 protein-coding chr6-7181 chr6 38201558 38201768 + 6.60 0.000 intron (NM_052893, intron 10 of 11) L1MA4A|LINE|L1 -279933 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr10-8210 chr10 72709990 72710200 + 6.60 0.000 intron (NM_001270680, intron 1 of 7) AluSc8|SINE|Alu -10934 NR_039823 100616286 NR_039823 ENSG00000266719 MIR4676 - microRNA 4676 ncRNA chr8-6160 chr8 32124782 32124992 + 6.60 0.000 intron (NR_104156, intron 3 of 3) MIR|SINE|MIR 98669 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr2-4742 chr2 8985993 8986203 + 6.60 0.000 intron (NR_135603, intron 1 of 13) L1MC3|LINE|L1 17586 NR_135600 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr3-10177 chr3 118353382 118353592 + 6.60 0.000 Intergenic MER77B|LTR|ERVL -288281 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr22-3599 chr22 20169270 20169480 + 6.60 0.000 Intergenic Intergenic -18320 NM_001365892 388849 Hs.454905 NM_001243537 ENSG00000234409 CCDC188 - coiled-coil domain containing 188 protein-coding chr6-7266 chr6 42958106 42958316 + 6.60 0.000 intron (NR_134890, intron 2 of 4) MER51-int|LTR|ERV1 -2543 NR_134899 27232 Hs.144914 NM_018960 ENSG00000124713 GNMT HEL-S-182mP glycine N-methyltransferase protein-coding chr4-6057 chr4 6197711 6197921 + 6.60 0.000 intron (NM_144720, intron 1 of 12) intron (NM_144720, intron 1 of 12) 2733 NM_001099433 152789 Hs.479066 NM_144720 ENSG00000152969 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding chr11-9856 chr11 72838957 72839167 + 6.60 0.000 intron (NM_014824, intron 19 of 19) intron (NM_014824, intron 19 of 19) 24651 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr15-3340 chr15 81191383 81191593 + 6.60 0.000 Intergenic L2a|LINE|L2 -5391 NM_001352685 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding chr13-2819 chr13 103205827 103206037 + 6.60 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -139515 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr6-4529 chr6 39209895 39210105 + 6.60 0.000 intron (NM_003740, intron 1 of 4) intron (NM_003740, intron 1 of 4) 19475 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding chr13-3903 chr13 54173281 54173491 + 6.60 0.000 Intergenic Intergenic -40515 NR_108062 100507428 Hs.351262 NR_108062 ENSG00000234787 LINC00458 LncRNA-ES3 long intergenic non-protein coding RNA 458 ncRNA chr8-5851 chr8 6565646 6565856 + 6.60 0.000 intron (NM_024596, intron 12 of 13) L2a|LINE|L2 -2506 NM_001118888 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr7-2190 chr7 94509788 94509998 + 6.60 0.000 promoter-TSS (NM_022900) promoter-TSS (NM_022900) 84 NM_001363426 64921 Hs.260041 NM_022900 ENSG00000127995 CASD1 C7orf12|NBLA04196|SOAT CAS1 domain containing 1 protein-coding chr18-2652 chr18 47114168 47114378 + 6.60 0.000 intron (NM_032124, intron 5 of 6) intron (NM_032124, intron 5 of 6) 36227 NM_032124 84064 Hs.465041 NM_032124 ENSG00000167220 HDHD2 3110052N05Rik|HEL-S-301 haloacid dehalogenase like hydrolase domain containing 2 protein-coding chr6-7261 chr6 42459251 42459461 + 6.60 0.000 Intergenic Intergenic -7132 NM_033502 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr7-9324 chr7 128490768 128490978 + 6.60 0.000 intron (NM_018396, intron 5 of 8) intron (NM_018396, intron 5 of 8) 14144 NM_018396 55798 Hs.433213 NM_018396 ENSG00000165055 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding chr11-10234 chr11 99895294 99895504 + 6.60 0.000 intron (NM_001243270, intron 5 of 23) intron (NM_001243270, intron 5 of 23) 339254 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr3-10904 chr3 171543756 171543966 + 6.60 0.000 Intergenic LTR33|LTR|ERVL -83453 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chrX-3213 chrX 51836362 51836572 + 6.60 0.000 intron (NM_001005332, intron 1 of 12) L1MEc|LINE|L1 33391 NM_001005332 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr11-7455 chr11 123483200 123483410 + 6.60 0.000 intron (NM_001367419, intron 2 of 20) Tigger7|DNA|TcMar-Tigger -26611 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr10-5741 chr10 102341054 102341264 + 6.60 0.000 intron (NM_001199378, intron 3 of 39) L1ME1|LINE|L1 -52951 NM_001288724 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr16-5457 chr16 2439608 2439818 + 6.60 0.000 intron (NM_001761, intron 7 of 16) intron (NM_001761, intron 7 of 16) -5679 NR_106825 102465459 NR_106825 ENSG00000283180 MIR6767 hsa-mir-6767 microRNA 6767 ncRNA chr9-6015 chr9 135471930 135472140 + 6.60 0.000 intron (NR_038969, intron 1 of 2) intron (NR_038969, intron 1 of 2) 214 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr16-3186 chr16 84314301 84314511 + 6.60 0.000 intron (NM_001282467, intron 2 of 6) intron (NM_001282467, intron 2 of 6) 19528 NM_001282467 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr12-2287 chr12 111698221 111698431 + 6.60 0.000 intron (NM_025247, intron 2 of 20) FLAM_A|SINE|Alu 12273 NM_001136538 80724 Hs.331141 NM_025247 ENSG00000111271 ACAD10 - acyl-CoA dehydrogenase family member 10 protein-coding chr11-6718 chr11 79723558 79723768 + 6.60 0.000 Intergenic L1M1|LINE|L1 -282633 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr5-4656 chr5 36253079 36253289 + 6.60 0.000 intron (NM_001323279, intron 11 of 12) intron (NM_001323279, intron 11 of 12) -10905 NM_153013 133686 Hs.81907 NM_153013 ENSG00000152620 NADK2 C5orf33|DECRD|MNADK|NADKD1 NAD kinase 2, mitochondrial protein-coding chr4-5828 chr4 101759848 101760058 + 6.60 0.000 Intergenic Intergenic -30654 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr6-4849 chr6 86320082 86320292 + 6.60 0.000 Intergenic MER57B1|LTR|ERV1 -617341 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr2-10532 chr2 233743794 233744004 + 6.60 0.000 promoter-TSS (NM_001001394) promoter-TSS (NM_001001394) 99 NM_001001394 414061 Hs.725533 NM_001001394 DNAJB3 HCG3 DnaJ heat shock protein family (Hsp40) member B3 protein-coding chr22-2514 chr22 23604099 23604309 + 6.60 0.000 Intergenic Intergenic -23914 NM_152855 3543 Hs.348935 NM_020070 ENSG00000128322 IGLL1 14.1|AGM2|CD179b|IGL1|IGL5|IGLJ14.1|IGLL|IGO|IGVPB|VPREB2 immunoglobulin lambda like polypeptide 1 protein-coding chr20-4332 chr20 53514448 53514658 + 6.60 0.000 Intergenic L1MA4|LINE|L1 -38217 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr5-7142 chr5 2238733 2238943 + 6.60 0.000 Intergenic Intergenic 73363 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chrX-3330 chrX 129133540 129133750 + 6.60 0.000 Intergenic AluSp|SINE|Alu 389845 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chrX-4476 chrX 63070201 63070411 + 6.60 0.000 Intergenic L1PA7|LINE|L1 281026 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr7-8514 chr7 54274860 54275070 + 6.60 0.000 Intergenic L1M3b|LINE|L1 -55732 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr13-2372 chr13 39940811 39941021 + 6.60 0.000 Intergenic Intergenic -240893 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr3-9607 chr3 56854372 56854582 + 6.60 0.000 intron (NM_001128615, intron 4 of 12) L2c|LINE|L2 -52528 NM_019555 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr2-9075 chr2 202388928 202389138 + 6.60 0.000 intron (NM_001204, intron 1 of 12) AluJr|SINE|Alu 12706 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr20-2065 chr20 11499290 11499500 + 6.60 0.000 Intergenic Intergenic -226012 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr5-8332 chr5 118071689 118071899 + 6.60 0.000 intron (NR_104997, intron 2 of 2) intron (NR_104997, intron 2 of 2) -210780 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr15-2965 chr15 50193028 50193238 + 6.60 0.000 intron (NM_001159629, intron 1 of 8) L2b|LINE|L2 10937 NM_003645 11001 Hs.11729 NM_003645 ENSG00000140284 SLC27A2 ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1 solute carrier family 27 member 2 protein-coding chrX-2783 chrX 131491395 131491605 + 6.60 0.000 Intergenic Intergenic -52574 NM_001004486 347468 Hs.553711 NM_001004486 ENSG00000171054 OR13H1 ORX1 olfactory receptor family 13 subfamily H member 1 protein-coding chr2-7229 chr2 221517385 221517595 + 6.60 0.000 intron (NM_001363748, intron 3 of 17) L2c|LINE|L2 54814 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr7-4846 chr7 103490554 103490764 + 6.60 0.000 intron (NM_005045, intron 59 of 64) intron (NM_005045, intron 59 of 64) -44452 NM_198999 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr6-8239 chr6 137322288 137322498 + 6.60 0.000 Intergenic Intergenic -102963 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr14-4194 chr14 89976509 89976719 + 6.60 0.000 intron (NM_001008744, intron 6 of 15) AluSx1|SINE|Alu 20687 NM_001330205 55775 Hs.209945 NM_018319 ENSG00000042088 TDP1 - tyrosyl-DNA phosphodiesterase 1 protein-coding chrX-3996 chrX 15577397 15577607 + 6.60 0.000 intron (NM_021804, intron 10 of 18) L3|LINE|CR1 23458 NM_001371415 chr6-7802 chr6 98833820 98834030 + 6.60 0.000 promoter-TSS (NM_005604) promoter-TSS (NM_005604) -649 NM_005604 5454 Hs.182505 NM_005604 ENSG00000184486 POU3F2 BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7 POU class 3 homeobox 2 protein-coding chr17-5911 chr17 74449407 74449617 + 6.60 0.000 3' UTR (NM_001366261, exon 5 of 5) 3' UTR (NM_001366261, exon 5 of 5) 15815 NM_018653 55890 Hs.446438 NM_018653 ENSG00000170412 GPRC5C RAIG-3|RAIG3 G protein-coupled receptor class C group 5 member C protein-coding chr5-6364 chr5 138589778 138589988 + 6.60 0.000 Intergenic AluJb|SINE|Alu -14482 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr6-7154 chr6 36802976 36803186 + 6.60 0.000 intron (NM_020939, intron 3 of 20) intron (NM_020939, intron 3 of 20) 36363 NM_001314017 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr7-8915 chr7 94677252 94677462 + 6.60 0.000 Intergenic L1P4|LINE|L1 20987 NM_001184962 23089 Hs.147492 NM_015068 ENSG00000242265 PEG10 EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1 paternally expressed 10 protein-coding chr10-6322 chr10 115612252 115612462 + 6.60 0.000 intron (NM_207303, intron 26 of 28) intron (NM_207303, intron 26 of 28) 518992 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr10-6340 chr10 123121487 123121697 + 6.60 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -14378 NM_001105574 340784 Hs.531194 NM_001105574 ENSG00000188620 HMX3 NKX-5.1|NKX5.1|Nkx5-1 H6 family homeobox 3 protein-coding chr1-9173 chr1 20681535 20681745 + 6.60 0.000 intron (NM_001122819, intron 11 of 14) intron (NM_001122819, intron 11 of 14) -20096 NM_005216 1650 Hs.523145 NM_005216 ENSG00000244038 DDOST AGER1|CDG1R|GATD6|OKSWcl45|OST|OST48|WBP1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit protein-coding chr15-3035 chr15 59148356 59148566 + 6.60 0.000 intron (NM_004998, intron 26 of 27) intron (NM_004998, intron 26 of 27) 22801 NR_031750 100313886 NR_031750 ENSG00000253030 MIR2116 mir-2116 microRNA 2116 ncRNA chr3-7813 chr3 98886424 98886634 + 6.60 0.000 intron (NM_080927, intron 1 of 15) intron (NM_080927, intron 1 of 15) 15166 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr3-10221 chr3 121974196 121974406 + 6.60 0.000 Intergenic LTR23|LTR|ERV1 47946 NM_001199800 286676 Hs.98484 NM_175924 ENSG00000145103 ILDR1 DFNB42|ILDR1alpha|ILDR1alpha'|ILDR1beta immunoglobulin like domain containing receptor 1 protein-coding chr12-4014 chr12 32107851 32108061 + 6.60 0.000 intron (NR_148725, intron 1 of 9) intron (NR_148725, intron 1 of 9) 1109 NM_001354189 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr6-5546 chr6 169125384 169125594 + 6.60 0.000 Intergenic LTR1E|LTR|ERV1 36812 NR_132622 101929484 Hs.364166 NR_132622 ENSG00000223485 LINC01615 - long intergenic non-protein coding RNA 1615 ncRNA chr11-8155 chr11 60484691 60484901 + 6.60 0.000 Intergenic MER5A|DNA|hAT-Charlie -7982 NM_017716 54860 Hs.272789 NM_017716 ENSG00000071203 MS4A12 Ms4a10 membrane spanning 4-domains A12 protein-coding chr8-6759 chr8 91240346 91240556 + 6.60 0.000 intron (NM_001282357, intron 2 of 18) intron (NM_001282357, intron 2 of 18) -8868 NM_052832 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chr18-3341 chr18 57237732 57237942 + 6.60 0.000 Intergenic L1ME4b|LINE|L1 -66643 NR_149129 105372138 Hs.574448 NR_149129 ENSG00000267726 LINC02565 - long intergenic non-protein coding RNA 2565 ncRNA chr9-8246 chr9 110933748 110933958 + 6.60 0.000 intron (NM_001351417, intron 5 of 5) intron (NM_001351417, intron 5 of 5) 102927 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr12-6907 chr12 23485782 23485992 + 6.60 0.000 Intergenic MSTA|LTR|ERVL-MaLR 98699 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr14-2983 chr14 51508055 51508265 + 6.60 0.000 intron (NM_001042481, intron 1 of 14) intron (NM_001042481, intron 1 of 14) 19032 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr1-16483 chr1 228982973 228983183 + 6.60 0.000 Intergenic Intergenic 191723 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr2-8362 chr2 109623275 109623485 + 6.60 0.000 Intergenic Intergenic 9016 NM_023016 65124 Hs.355455 NM_023016 ENSG00000198142 SOWAHC ANKRD57|C2orf26 sosondowah ankyrin repeat domain family member C protein-coding chr17-5791 chr17 63453047 63453257 + 6.60 0.000 Intergenic Intergenic -6846 NM_001915 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr6-4274 chr6 11432996 11433206 + 6.60 0.000 Intergenic Intergenic -50753 NR_073131 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr3-9264 chr3 40140335 40140545 + 6.60 0.000 intron (NM_001284426, intron 1 of 14) L1ME1|LINE|L1 40429 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr13-2694 chr13 90348890 90349100 + 6.60 0.000 Intergenic LTR12C|LTR|ERV1 117813 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr1-15337 chr1 119866692 119866902 + 6.60 0.000 Intergenic LTR16A2|LTR|ERVL -21917 NM_001047980 343505 NM_001047980 NBPF7 - NBPF member 7 protein-coding chr5-9137 chr5 176151915 176152125 + 6.60 0.000 intron (NR_036494, intron 19 of 25) intron (NR_036494, intron 19 of 25) 32471 NR_038402 100507387 Hs.368516 NR_038402 ENSG00000251623 LOC100507387 - uncharacterized LOC100507387 ncRNA chr13-3176 chr13 109859464 109859674 + 6.60 0.000 Intergenic Intergenic -72986 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr19-4393 chr19 3239268 3239478 + 6.60 0.000 intron (NR_033342, intron 1 of 12) AluJo|SINE|Alu 14095 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr3-2929 chr3 53688497 53688707 + 6.60 0.000 intron (NM_000720, intron 8 of 48) intron (NM_000720, intron 8 of 48) 157817 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr11-9840 chr11 72570050 72570260 + 6.60 0.000 promoter-TSS (NR_126364) promoter-TSS (NR_126364) -501 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr2-9041 chr2 199000710 199000920 + 6.60 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 457124 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr16-3760 chr16 26643553 26643763 + 6.60 0.000 Intergenic LTR16C|LTR|ERVL -423269 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr3-9038 chr3 22754311 22754521 + 6.60 0.000 Intergenic Intergenic 448162 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr19-6420 chr19 15202924 15203134 + 6.60 0.000 Intergenic Intergenic -2034 NM_000435 4854 Hs.8546 NM_000435 ENSG00000074181 NOTCH3 CADASIL|CADASIL1|CASIL|IMF2|LMNS notch receptor 3 protein-coding chr21-1616 chr21 19698228 19698438 + 6.60 0.000 Intergenic ERVL-E-int|LTR|ERVL 201422 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr5-6228 chr5 80077964 80078174 + 6.60 0.000 exon (NM_003248, exon 17 of 22) exon (NM_003248, exon 17 of 22) 5596 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr22-3189 chr22 35411377 35411587 + 6.60 0.000 intron (NM_006739, intron 7 of 16) intron (NM_006739, intron 7 of 16) 11342 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|MGORS8|P1-CDC46 minichromosome maintenance complex component 5 protein-coding chr14-5141 chr14 90711312 90711522 + 6.60 0.000 intron (NM_001320421, intron 5 of 20) L1ME1|LINE|L1 14084 NR_135190 105370622 Hs.662373 NR_135190 ENSG00000258716 LOC105370622 - uncharacterized LOC105370622 ncRNA chr20-2307 chr20 6429960 6430170 + 6.60 0.000 intron (NR_109953, intron 1 of 3) intron (NR_109953, intron 1 of 3) 3333 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chrX-3276 chrX 99263465 99263675 + 6.60 0.000 Intergenic MLT2A1|LTR|ERVL 1146703 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding GL000251.2-2 GL000251.2 2836942 2837152 + 6.60 0.000 NA NA NA NA chr8-4784 chr8 144052089 144052299 + 6.60 0.000 exon (NM_017570, exon 24 of 27) exon (NM_017570, exon 24 of 27) 2796 NR_158554 392275 NR_158554 SMPD5 MA-nSMase sphingomyelin phosphodiesterase 5 pseudo chr15-4254 chr15 33812583 33812793 + 6.60 0.000 intron (NM_001243996, intron 71 of 102) L1MEd|LINE|L1 -155809 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chrX-4624 chrX 77130800 77131010 + 6.60 0.000 Intergenic L1PB1|LINE|L1 -116373 NR_110404 101928469 Hs.640805 NR_110400 ENSG00000280870 MIR325HG MIR384HG MIR325 host gene ncRNA chr8-6964 chr8 106507269 106507479 + 6.60 0.000 intron (NM_001198532, intron 1 of 15) MIR|SINE|MIR 59450 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr3-9045 chr3 23581988 23582198 + 6.60 0.000 intron (NM_001370225, intron 5 of 5) L1PA15|LINE|L1 -223862 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr5-6910 chr5 133794959 133795169 + 6.60 0.000 Intergenic Intergenic -118613 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr3-11192 chr3 193404579 193404789 + 6.60 0.000 intron (NM_032279, intron 29 of 29) MSTA|LTR|ERVL-MaLR -25931 NM_198505 344905 Hs.658032 NM_198505 ENSG00000187527 ATP13A5 - ATPase 13A5 protein-coding chr2-7368 chr2 2728928 2729138 + 6.60 0.000 Intergenic MIRc|SINE|MIR 396993 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr1-11105 chr1 229987814 229988024 + 6.60 0.000 Intergenic OldhAT1|DNA|hAT-Ac -14798 NR_135116 101927532 Hs.40183 NR_135116 ENSG00000228058 LINC01736 - long intergenic non-protein coding RNA 1736 ncRNA chr14-5121 chr14 89439943 89440153 + 6.60 0.000 intron (NM_001085471, intron 1 of 6) MER41A|LTR|ERV1 22694 NR_036500 400236 Hs.585207 NR_036500 ENSG00000258920 FOXN3-AS1 - FOXN3 antisense RNA 1 ncRNA chrX-2442 chrX 80355248 80355458 + 6.60 0.000 intron (NM_001170574, intron 3 of 4) L1P4e|LINE|L1 19849 NM_001170574 169966 Hs.367959 NM_152630 ENSG00000174016 TENT5D CT1.26|CT112|FAM46D terminal nucleotidyltransferase 5D protein-coding chr3-5870 chr3 35522512 35522722 + 6.60 0.000 Intergenic Intergenic -116908 NM_001267616 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr5-6606 chr5 34991518 34991728 + 6.60 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 56326 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr1-15814 chr1 178468144 178468354 + 6.60 0.000 intron (NM_004841, intron 15 of 15) intron (NM_004841, intron 15 of 15) -44860 NM_032126 84066 Hs.534501 NM_032126 ENSG00000240021 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding chr1-8483 chr1 119081656 119081866 + 6.60 0.000 intron (NM_015836, intron 1 of 5) intron (NM_015836, intron 1 of 5) 34356 NR_126447 104472716 Hs.689536 NR_126447 WARS2-IT1 - WARS2 intronic transcript 1 ncRNA chr9-7984 chr9 93196620 93196830 + 6.60 0.000 intron (NM_006648, intron 1 of 28) intron (NM_006648, intron 1 of 28) 11795 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr20-2382 chr20 17604382 17604592 + 6.60 0.000 intron (NM_001011546, intron 3 of 4) intron (NM_001011546, intron 3 of 4) 34412 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr7-8004 chr7 16688295 16688505 + 6.60 0.000 intron (NM_001362717, intron 6 of 11) intron (NM_001362717, intron 6 of 11) 27186 NM_001362719 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr2-8407 chr2 116215494 116215704 + 6.60 0.000 Intergenic AluSx|SINE|Alu 871784 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr4-1545 chr4 173169244 173169454 + 6.60 0.000 non-coding (NR_134242, exon 1 of 7) non-coding (NR_134242, exon 1 of 7) 303 NR_134242 101930370 Hs.563191 NR_134241 ENSG00000245213 LOC101930370 - uncharacterized LOC101930370 ncRNA chr15-5137 chr15 90394711 90394921 + 6.60 0.000 intron (NM_003870, intron 2 of 37) intron (NM_003870, intron 2 of 37) 6574 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr15-3782 chr15 68288743 68288953 + 6.60 0.000 intron (NM_015322, intron 1 of 1) L1ME3A|LINE|L1 11103 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr1-14306 chr1 39215442 39215652 + 6.60 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 131380 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr3-8528 chr3 139860323 139860533 + 6.60 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -74757 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr11-8871 chr11 14051660 14051870 + 6.60 0.000 intron (NM_006108, intron 3 of 15) MLT1A0|LTR|ERVL-MaLR 89042 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr7-7097 chr7 158779766 158779976 + 6.60 0.000 intron (NM_020728, intron 6 of 21) intron (NM_020728, intron 6 of 21) 49638 NM_001367773 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr4-3427 chr4 77404774 77404984 + 6.60 0.000 Intergenic Intergenic -106874 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr4-5824 chr4 100722597 100722807 + 6.60 0.000 Intergenic MIR|SINE|MIR -47589 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr1-16690 chr1 245121389 245121599 + 6.60 0.000 intron (NM_001143943, intron 6 of 6) intron (NM_001143943, intron 6 of 6) -33491 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chrX-4277 chrX 41659727 41659937 + 6.60 0.000 intron (NM_003688, intron 8 of 26) AluJb|SINE|Alu -29141 NM_005300 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr6-8326 chr6 145798430 145798640 + 6.60 0.000 3' UTR (NM_032145, exon 3 of 3) 3' UTR (NM_032145, exon 3 of 3) 16260 NM_001348092 84085 Hs.421095 NM_032145 ENSG00000118496 FBXO30 Fbx30 F-box protein 30 protein-coding chr13-3329 chr13 63161323 63161533 + 6.60 0.000 Intergenic Intergenic 166666 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr19-4885 chr19 40590155 40590365 + 6.60 0.000 exon (NM_138392, exon 16 of 18) exon (NM_138392, exon 16 of 18) -2906 NM_003573 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chrX-4156 chrX 31014995 31015205 + 6.60 0.000 Intergenic Intergenic 56941 NM_031894 53940 Hs.333125 NM_031894 ENSG00000132446 FTHL17 CT38 ferritin heavy chain like 17 protein-coding chr2-12965 chr2 103821637 103821847 + 6.60 0.000 Intergenic HAL1|LINE|L1 586590 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr5-8969 chr5 160981427 160981637 + 6.60 0.000 Intergenic MER41-int|LTR|ERV1 -42906 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr20-3895 chr20 31788495 31788705 + 6.60 0.000 intron (NM_012112, intron 12 of 17) MamRTE1|LINE|RTE-BovB -30775 NM_033118 85366 Hs.86092 NM_033118 ENSG00000101306 MYLK2 KMLC|MLCK|MLCK2|skMLCK myosin light chain kinase 2 protein-coding chr1-14126 chr1 31610644 31610854 + 6.60 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -6951 NM_001525 3061 Hs.388226 NM_001525 ENSG00000121764 HCRTR1 OX1R hypocretin receptor 1 protein-coding chr11-4675 chr11 62468775 62468985 + 6.60 0.000 intron (NM_024060, intron 5 of 5) LTR54|LTR|ERV1 49847 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr16-5510 chr16 18936971 18937181 + 6.60 0.000 Intergenic LTR33|LTR|ERVL -10672 NM_015092 23049 Hs.460179 NM_015092 ENSG00000157106 SMG1 61E3.4|ATX|LIP SMG1 nonsense mediated mRNA decay associated PI3K related kinase protein-coding chr1-11952 chr1 68813375 68813585 + 6.60 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -242418 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr11-10062 chr11 84344242 84344452 + 6.60 0.000 intron (NM_001142699, intron 7 of 27) MIR|SINE|MIR -27008 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr2-7571 chr2 25007661 25007871 + 6.60 0.000 intron (NR_034113, intron 2 of 2) AluYk11|SINE|Alu -34310 NM_014971 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr7-8349 chr7 43513476 43513686 + 6.60 0.000 intron (NR_038276, intron 1 of 2) intron (NR_038276, intron 1 of 2) 8961 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr2-11273 chr2 179860280 179860490 + 6.60 0.000 TTS (NR_031659) TTS (NR_031659) 523 NR_031659 100302172 NR_031659 ENSG00000221240 MIR1258 MIRN1258|hsa-mir-1258|mir-1258 microRNA 1258 ncRNA chr5-8034 chr5 90440704 90440914 + 6.60 0.000 Intergenic Intergenic 30809 NR_105024 731157 Hs.551062 NR_105024 ENSG00000255647 LOC731157 - uncharacterized LOC731157 ncRNA chr4-6402 chr4 121556064 121556274 + 6.60 0.000 Intergenic MER66B|LTR|ERV1 140811 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr1-4187 chr1 43530849 43531059 + 6.60 0.000 promoter-TSS (NM_001329139) promoter-TSS (NM_001329139) 71 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr14-3035 chr14 57822996 57823206 + 6.60 0.000 intron (NM_001352012, intron 1 of 8) L2a|LINE|L2 41898 NM_001352012 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr7-8739 chr7 76445619 76445829 + 6.60 0.000 Intergenic Intergenic -15931 NM_020892 113878 Hs.187058 NM_020892 ENSG00000091073 DTX2 RNF58 deltex E3 ubiquitin ligase 2 protein-coding chr11-9886 chr11 74488161 74488371 + 6.60 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -5119 NM_001319240 100287896 Hs.591971 NM_198519 LOC100287896 - uncharacterized LOC100287896 protein-coding chr12-7331 chr12 55235488 55235698 + 6.60 0.000 Intergenic L1MB5|LINE|L1 -11695 NM_001005490 254783 Hs.554556 NM_001005490 ENSG00000197706 OR6C74 - olfactory receptor family 6 subfamily C member 74 protein-coding chr1-10053 chr1 91583392 91583602 + 6.60 0.000 Intergenic MER121|DNA|hAT? 82389 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr5-3765 chr5 61255857 61256067 + 6.60 0.000 intron (NR_146624, intron 1 of 2) AluJr|SINE|Alu 8967 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr2-11881 chr2 23485264 23485474 + 6.60 0.000 intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 100190 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2-12586 chr2 70594530 70594740 + 6.60 0.000 Intergenic L2a|LINE|L2 -40809 NM_003236 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr9-5079 chr9 34260589 34260799 + 6.60 0.000 intron (NM_194313, intron 9 of 12) AluSx|SINE|Alu 68574 NM_194313 347240 Hs.710246 NM_194313 ENSG00000186638 KIF24 C9orf48|bA571F15.4 kinesin family member 24 protein-coding chr10-6173 chr10 13075316 13075526 + 6.60 0.000 intron (NM_001282658, intron 3 of 6) intron (NM_001282658, intron 3 of 6) 24568 NM_001282658 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr15-2631 chr15 69067418 69067628 + 6.60 0.000 Intergenic Intergenic -13327 NR_026949 283673 Hs.177927 NM_173610 ENSG00000212766 EWSAT1 LINC00277|NCRNA00277|TMEM84 Ewing sarcoma associated transcript 1 ncRNA chr1-14210 chr1 34824516 34824726 + 6.60 0.000 Intergenic Intergenic 31622 NM_002060 2701 Hs.296310 NM_002060 ENSG00000187513 GJA4 CX37 gap junction protein alpha 4 protein-coding chr2-11024 chr2 108075141 108075351 + 6.60 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -22491 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA chrX-3033 chrX 84046355 84046565 + 6.60 0.000 Intergenic L1PA15-16|LINE|L1 141475 NM_001330512 27330 Hs.234478 NM_014496 ENSG00000072133 RPS6KA6 PP90RSK4|RSK-4|RSK4|S6K-alpha-6|p90RSK6 ribosomal protein S6 kinase A6 protein-coding chr5-4602 chr5 31267907 31268117 + 6.60 0.000 intron (NM_001362435, intron 2 of 10) intron (NM_001362435, intron 2 of 10) 74326 NM_001362435 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr15-3529 chr15 100544620 100544830 + 6.60 0.000 promoter-TSS (NM_001290342) promoter-TSS (NM_001290342) -42 NM_001290343 204219 Hs.662371 NM_178842 ENSG00000154227 CERS3 ARCI9|LASS3 ceramide synthase 3 protein-coding chr4-7908 chr4 106886776 106886986 + 6.60 0.000 Intergenic L1MEg|LINE|L1 149432 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr6-3530 chr6 37619412 37619622 + 6.60 0.000 Intergenic Intergenic -64095 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr19-3141 chr19 19379573 19379783 + 6.60 0.000 Intergenic MIRb|SINE|MIR -6125 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr2-10456 chr2 215033426 215033636 + 6.60 0.000 intron (NR_103740, intron 9 of 54) intron (NR_103740, intron 9 of 54) -1445 NM_015657 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr11-9372 chr11 48421825 48422035 + 6.60 0.000 Intergenic LTR41B|LTR|ERVL -55442 NM_001348223 79346 NM_001348223 ENSG00000176540 OR4C5 OR4C5P|OR4C5Q olfactory receptor family 4 subfamily C member 5 (gene/pseudogene) protein-coding chr3-8942 chr3 14341428 14341638 + 6.60 0.000 Intergenic Intergenic 11035 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA chr14-3478 chr14 101852100 101852310 + 6.60 0.000 intron (NM_001352916, intron 2 of 13) Charlie7|DNA|hAT-Charlie 42342 NM_001352912 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr11-5586 chr11 109889739 109889949 + 6.60 0.000 Intergenic Intergenic -203548 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr9-6846 chr9 71101856 71102066 + 6.60 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) 19660 NM_001366148 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr2-10226 chr2 109607233 109607443 + 6.60 0.000 intron (NM_001321509, intron 1 of 10) intron (NM_001321509, intron 1 of 10) 6329 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr6-5246 chr6 136365934 136366144 + 6.60 0.000 intron (NM_001198611, intron 8 of 16) intron (NM_001198611, intron 8 of 16) -76188 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr22-3034 chr22 30505310 30505520 + 6.60 0.000 intron (NM_001161368, intron 1 of 11) CpG 280 NM_174977 284904 Hs.517541 NM_174977 ENSG00000133488 SEC14L4 TAP3 SEC14 like lipid binding 4 protein-coding chr16-3790 chr16 31393580 31393790 + 6.60 0.000 intron (NM_001318185, intron 1 of 29) intron (NM_001318185, intron 1 of 29) 350 NM_005353 3681 Hs.679163 NM_005353 ENSG00000156886 ITGAD ADB2|CD11D integrin subunit alpha D protein-coding chr5-6340 chr5 134851286 134851496 + 6.60 0.000 intron (NM_001135586, intron 1 of 1) intron (NM_001135586, intron 1 of 1) 5423 NM_001300894 134553 Hs.708536 NM_152409 ENSG00000181904 C5orf24 - chromosome 5 open reading frame 24 protein-coding chr1-13009 chr1 160861047 160861257 + 6.60 0.000 intron (NM_001166664, intron 1 of 7) intron (NM_001166664, intron 1 of 7) 1735 NM_001166663 51744 Hs.157872 NM_016382 ENSG00000122223 CD244 2B4|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 molecule protein-coding chr2-10012 chr2 25058751 25058961 + 6.60 0.000 intron (NM_001319099, intron 1 of 22) L1MB3|LINE|L1 16393 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr3-4672 chr3 43062279 43062489 + 6.60 0.000 Intergenic Intergenic 43695 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chr2-9359 chr2 227679627 227679837 + 6.60 0.000 Intergenic Intergenic 26924 NM_001371412 chr11-6723 chr11 80324819 80325029 + 6.60 0.000 Intergenic Intergenic 437879 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr7-7457 chr7 89679380 89679590 + 6.60 0.000 Intergenic THE1B|LTR|ERVL-MaLR -439915 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr8-6670 chr8 80486282 80486492 + 6.60 0.000 5' UTR (NM_023929, exon 1 of 7) 5' UTR (NM_023929, exon 1 of 7) 161 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr5-6254 chr5 95619639 95619849 + 6.60 0.000 promoter-TSS (NM_199243) promoter-TSS (NM_199243) -343 NM_199243 285601 Hs.143315 NM_199243 ENSG00000178015 GPR150 PGR11 G protein-coupled receptor 150 protein-coding chr16-5536 chr16 26597782 26597992 + 6.60 0.000 Intergenic AluJr|SINE|Alu -469040 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr4-5197 chr4 160726512 160726722 + 6.60 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -948833 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr1-8390 chr1 76740010 76740220 + 6.60 0.000 Intergenic L1PA7|LINE|L1 39152 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chrX-4786 chrX 98092404 98092614 + 6.60 0.000 Intergenic L1PA15|LINE|L1 -527974 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr15-2002 chr15 44028371 44028581 + 6.48 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) -150305 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr2-14725 chr2 238586740 238586950 + 6.48 0.000 Intergenic Intergenic -31346 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr16-6163 chr16 23870273 23870483 + 6.48 0.000 intron (NM_002738, intron 2 of 16) intron (NM_002738, intron 2 of 16) 34395 NM_002738 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr6-2275 chr6 74273488 74273698 + 6.48 0.000 intron (NR_110856, intron 1 of 3) intron (NR_110856, intron 1 of 3) 204142 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr12-6529 chr12 111169535 111169745 + 6.48 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 69636 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr3-6681 chr3 131081390 131081600 + 6.48 0.000 intron (NM_001353043, intron 4 of 17) intron (NM_001353043, intron 4 of 17) 53767 NM_001321223 79858 Hs.657336 NM_024800 ENSG00000114670 NEK11 - NIMA related kinase 11 protein-coding chr1-11470 chr1 98043210 98043420 + 6.48 0.000 intron (NR_046105, intron 3 of 4) intron (NR_046105, intron 3 of 4) 2036 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr6-4655 chr6 50357556 50357766 + 6.48 0.000 Intergenic HERVL-int|LTR|ERVL -307732 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding chr7-4277 chr7 6560259 6560469 + 6.48 0.000 Intergenic Intergenic -8928 NM_001145118 392862 Hs.512174 NM_001145118 ENSG00000215045 GRID2IP DELPHILIN Grid2 interacting protein protein-coding chr6-5845 chr6 35273010 35273220 + 6.48 0.000 intron (NM_001292032, intron 1 of 12) AluSz|SINE|Alu 13380 NM_001292032 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr3-10206 chr3 120868424 120868634 + 6.48 0.000 Intergenic Intergenic -32172 NR_135571 101926983 Hs.553055 NR_135570 ENSG00000243593 LINC02049 - long intergenic non-protein coding RNA 2049 ncRNA chr2-5879 chr2 240703735 240703945 + 6.48 0.000 Intergenic Intergenic 11974 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr1-15498 chr1 155897901 155898111 + 6.48 0.000 3' UTR (NM_001256821, exon 6 of 6) 3' UTR (NM_001256821, exon 6 of 6) 12912 NM_001256821 6016 Hs.491234 NM_006912 ENSG00000143622 RIT1 NS8|RIBB|RIT|ROC1 Ras like without CAAX 1 protein-coding chr17-7359 chr17 6936504 6936714 + 6.48 0.000 Intergenic MER51A|LTR|ERV1 42832 NR_120453 245 Hs.378695 NR_002710 ENSG00000262943 ALOX12P2 ALOX12E arachidonate 12-lipoxygenase pseudogene 2 pseudo chr13-4461 chr13 113012491 113012701 + 6.48 0.000 intron (NM_001320815, intron 1 of 30) CpG 10882 NM_001320817 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr1-16668 chr1 242142081 242142291 + 6.48 0.000 intron (NM_001320272, intron 6 of 10) intron (NM_001320272, intron 6 of 10) -143088 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr3-7571 chr3 2616173 2616383 + 6.48 0.000 intron (NM_175607, intron 4 of 24) L1PA8A|LINE|L1 -275937 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr9-5047 chr9 31597992 31598202 + 6.48 0.000 Intergenic Intergenic -216607 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr11-7411 chr11 95567783 95567993 + 6.48 0.000 Intergenic L3|LINE|CR1 221894 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr11-9196 chr11 37090379 37090589 + 6.48 0.000 Intergenic MIR|SINE|MIR -492205 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr21-276 chr21 42107810 42108020 + 6.48 0.000 intron (NM_001004416, intron 9 of 22) intron (NM_001004416, intron 9 of 22) 619 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr9-8329 chr9 115114678 115114888 + 6.48 0.000 intron (NM_002160, intron 1 of 27) MIRb|SINE|MIR 3374 NM_002160 3371 Hs.143250 NM_002160 ENSG00000041982 TNC 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C tenascin C protein-coding chr15-4237 chr15 33160386 33160596 + 6.48 0.000 intron (NM_001277313, intron 3 of 20) intron (NM_001277313, intron 3 of 20) 34223 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding GL000216.2-15 GL000216.2 3652 3862 + 6.48 0.000 NA NA NA NA chr13-1770 chr13 113332319 113332529 + 6.48 0.000 intron (NM_024719, intron 5 of 7) (CACGCA)n|Simple_repeat|Simple_repeat -19249 NR_046541 100874068 Hs.661837 NR_046541 GRTP1-AS1 - GRTP1 antisense RNA 1 ncRNA chr6-4211 chr6 4190523 4190733 + 6.48 0.000 promoter-TSS (NR_125874) promoter-TSS (NR_125874) -599 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr17-6610 chr17 60569954 60570164 + 6.48 0.000 intron (NR_126009, intron 2 of 3) intron (NR_126009, intron 2 of 3) 5513 NR_126009 388406 Hs.368309 NR_126009 ENSG00000267772 LINC01999 - long intergenic non-protein coding RNA 1999 ncRNA chr5-3969 chr5 10113577 10113787 + 6.48 0.000 Intergenic LTR33|LTR|ERVL 136206 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr3-7413 chr3 107298607 107298817 + 6.48 0.000 intron (NR_028302, intron 2 of 3) L1ME1|LINE|L1 58020 NR_028302 344595 Hs.543039 NR_028301 ENSG00000243701 DUBR DUM|LINC00883|LINC0883 DPPA2 upstream binding RNA ncRNA chrX-2526 chrX 97306266 97306476 + 6.48 0.000 intron (NM_007309, intron 23 of 26) LTR86A1|LTR|ERVL 258164 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr22-2515 chr22 23630927 23631137 + 6.48 0.000 intron (NM_016449, intron 1 of 11) L1PA10|LINE|L1 1289 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr6-5079 chr6 117027251 117027461 + 6.48 0.000 Intergenic Intergenic 150114 NM_173560 222546 Hs.352276 NM_173560 ENSG00000185002 RFX6 MTCHRS|MTFS|RFXDC1|dJ955L16.1 regulatory factor X6 protein-coding chr15-2080 chr15 63006209 63006419 + 6.48 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -36433 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr1-14734 chr1 66613642 66613852 + 6.48 0.000 intron (NM_001350218, intron 1 of 22) intron (NM_001350218, intron 1 of 22) -14693 NR_036060 100422871 NR_036060 ENSG00000264720 MIR3117 mir-3117 microRNA 3117 ncRNA chr6-6970 chr6 18241368 18241578 + 6.48 0.000 intron (NM_003472, intron 7 of 10) intron (NM_003472, intron 7 of 10) 23057 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr8-2740 chr8 103088540 103088750 + 6.48 0.000 Intergenic Intergenic -32387 NR_145429 379034 Hs.591862 NR_145429 LINC01181 - long intergenic non-protein coding RNA 1181 ncRNA chr1-8329 chr1 53299271 53299481 + 6.48 0.000 intron (NM_004631, intron 2 of 18) intron (NM_004631, intron 2 of 18) 28694 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr4-6782 chr4 7142065 7142275 + 6.48 0.000 Intergenic AluSz6|SINE|Alu -38794 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr13-3945 chr13 60518835 60519045 + 6.48 0.000 intron (NM_030794, intron 10 of 13) intron (NM_030794, intron 10 of 13) 121720 NM_001146070 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr7-9112 chr7 106986505 106986715 + 6.48 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -58095 NM_002736 5577 Hs.433068 NM_002736 ENSG00000005249 PRKAR2B PRKAR2|RII-BETA protein kinase cAMP-dependent type II regulatory subunit beta protein-coding chr7-4347 chr7 46679298 46679508 + 6.48 0.000 Intergenic Intergenic 17719 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr19-6765 chr19 40379810 40380020 + 6.48 0.000 intron (NM_144685, intron 3 of 3) AluJb|SINE|Alu 10069 NR_106854 102465477 NR_106854 ENSG00000275652 MIR6796 hsa-mir-6796 microRNA 6796 ncRNA chr1-16117 chr1 204658448 204658658 + 6.48 0.000 intron (NM_201630, intron 1 of 1) HAL1|LINE|L1 27185 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr6-8178 chr6 132784600 132784810 + 6.48 0.000 intron (NM_052831, intron 5 of 13) L1ME4b|LINE|L1 13932 NM_052831 116843 Hs.347144 NM_052831 ENSG00000146409 SLC18B1 C6orf192|dJ55C23.6 solute carrier family 18 member B1 protein-coding chrX-4655 chrX 80399994 80400204 + 6.48 0.000 intron (NM_001170574, intron 3 of 4) Ricksha_c|DNA|MULE-MuDR -20348 NM_152630 169966 Hs.367959 NM_152630 ENSG00000174016 TENT5D CT1.26|CT112|FAM46D terminal nucleotidyltransferase 5D protein-coding chr12-8094 chr12 118301368 118301578 + 6.48 0.000 intron (NM_001346490, intron 1 of 21) intron (NM_001346490, intron 1 of 21) 58232 NM_001346489 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr1-8094 chr1 6716423 6716633 + 6.48 0.000 Intergenic MER44B|DNA|TcMar-Tigger -8217 NR_104620 100505887 Hs.250839 NR_104620 LINC01672 NMR long intergenic non-protein coding RNA 1672 ncRNA chr1-8602 chr1 185811249 185811459 + 6.48 0.000 intron (NM_031935, intron 1 of 106) intron (NM_031935, intron 1 of 106) 76963 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr2-11111 chr2 131176962 131177172 + 6.48 0.000 Intergenic Intergenic -41284 NM_001083538 445582 Hs.686146 NM_001004054 ENSG00000188219 POTEE A26C1|A26C1A|CT104.2|POTE-2|POTE2|POTE2gamma POTE ankyrin domain family member E protein-coding chr5-6951 chr5 140219954 140220164 + 6.48 0.000 intron (NM_032412, intron 2 of 2) intron (NM_032412, intron 2 of 2) 44871 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr2-5354 chr2 95761164 95761374 + 6.48 0.000 Intergenic Intergenic 65712 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr3-9756 chr3 69541078 69541288 + 6.48 0.000 Intergenic Intergenic -155095 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr12-5969 chr12 87936997 87937207 + 6.48 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 92299 NM_152589 160419 Hs.112930 NM_152589 ENSG00000165805 C12orf50 - chromosome 12 open reading frame 50 protein-coding chr16-6206 chr16 27852157 27852367 + 6.48 0.000 intron (NM_001323901, intron 2 of 5) intron (NM_001323901, intron 2 of 5) 35895 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr5-6716 chr5 69007638 69007848 + 6.48 0.000 intron (NR_130778, intron 1 of 3) intron (NR_130778, intron 1 of 3) 22184 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr11-9468 chr11 61839922 61840132 + 6.48 0.000 intron (NM_001281502, intron 2 of 11) L1MB3|LINE|L1 11727 NM_004265 9415 Hs.502745 NM_004265 ENSG00000134824 FADS2 D6D|DES6|FADSD6|LLCDL2|SLL0262|TU13 fatty acid desaturase 2 protein-coding chr11-7752 chr11 76694893 76695103 + 6.48 0.000 intron (NR_024042, intron 15 of 20) (T)n|Simple_repeat|Simple_repeat -24251 NM_001370187 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr1-12107 chr1 159194263 159194473 + 6.48 0.000 intron (NM_001127173, intron 5 of 8) MER58A|DNA|hAT-Charlie 8054 NR_037870 100131825 Hs.701271 NR_037870 CADM3-AS1 - CADM3 antisense RNA 1 ncRNA chr3-5821 chr3 30701761 30701971 + 6.48 0.000 Intergenic LTR48|LTR|ERV1 95265 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr3-5402 chr3 158717578 158717788 + 6.48 0.000 intron (NM_206963, intron 1 of 5) intron (NM_206963, intron 1 of 5) 14774 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr2-13552 chr2 153138056 153138266 + 6.48 0.000 Intergenic MIR|SINE|MIR 340601 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr17-4339 chr17 3802972 3803182 + 6.48 0.000 3' UTR (NM_001114118, exon 13 of 13) 3' UTR (NM_001114118, exon 13 of 13) -1889 NM_002208 3682 Hs.513867 NM_002208 ENSG00000083457 ITGAE CD103|HUMINAE integrin subunit alpha E protein-coding chr9-4020 chr9 63823320 63823530 + 6.48 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -3771 NR_039688 100616184 NR_039688 ENSG00000276029 MIR4477A - microRNA 4477a ncRNA chr13-2352 chr13 36420602 36420812 + 6.48 0.000 Intergenic LTR55|LTR|ERVL? -11123 NM_001111046 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr4-7349 chr4 57344402 57344612 + 6.48 0.000 Intergenic Intergenic -81365 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr5-4370 chr5 172141236 172141446 + 6.48 0.000 intron (NM_005990, intron 2 of 18) AluJo|SINE|Alu 46883 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr11-8555 chr11 132880842 132881052 + 6.48 0.000 intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 62690 NM_002545 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr13-3127 chr13 78625706 78625916 + 6.48 0.000 intron (NM_024546, intron 5 of 5) intron (NM_024546, intron 5 of 5) -22259 NM_006237 5457 Hs.654522 NM_006237 ENSG00000152192 POU4F1 BRN3A|Oct-T1|RDC-1|brn-3A POU class 4 homeobox 1 protein-coding chr13-3995 chr13 67782658 67782868 + 6.48 0.000 Intergenic AluSx1|SINE|Alu 410376 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr6-6430 chr6 97471154 97471364 + 6.48 0.000 intron (NR_110757, intron 1 of 4) MLT1N2|LTR|ERVL-MaLR 165673 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr3-7639 chr3 27915568 27915778 + 6.48 0.000 Intergenic Intergenic -81537 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr2-8653 chr2 147244934 147245144 + 6.48 0.000 Intergenic Intergenic -599478 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr9-6632 chr9 131712880 131713090 + 6.48 0.000 intron (NM_001304275, intron 1 of 23) intron (NM_001304275, intron 1 of 23) -3143 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr14-5385 chr14 104027086 104027296 + 6.48 0.000 intron (NM_153046, intron 28 of 35) (TATT)n|Simple_repeat|Simple_repeat -58509 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr2-2131 chr2 68284822 68285032 + 6.48 0.000 intron (NM_001111101, intron 2 of 2) intron (NM_001111101, intron 2 of 2) -32395 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr2-13011 chr2 107633733 107633943 + 6.48 0.000 Intergenic LTR8B|LTR|ERV1 104419 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA chr13-3062 chr13 36362445 36362655 + 6.48 0.000 intron (NR_045180, intron 2 of 5) intron (NR_045180, intron 2 of 5) 7630 NM_001142294 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding chr20-3201 chr20 50413143 50413353 + 6.48 0.000 Intergenic L2a|LINE|L2 -91906 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr6-5586 chr6 35340984 35341194 + 6.48 0.000 Intergenic Intergenic -1469 NM_001171819 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr4-7589 chr4 80663943 80664153 + 6.48 0.000 intron (NM_001206997, intron 4 of 6) L1PA7|LINE|L1 328328 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr10-6470 chr10 35507554 35507764 + 6.48 0.000 intron (NM_001282854, intron 3 of 7) L1MC4|LINE|L1 -97682 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding chr11-9406 chr11 58095492 58095702 + 6.48 0.000 intron (NM_001005212, intron 2 of 2) THE1C|LTR|ERVL-MaLR 23847 NM_001005211 219954 Hs.632122 NM_001005211 ENSG00000172377 OR9I1 OR11-228 olfactory receptor family 9 subfamily I member 1 protein-coding chr10-7375 chr10 2549918 2550128 + 6.48 0.000 Intergenic Intergenic -48561 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr9-7183 chr9 135891273 135891483 + 6.48 0.000 intron (NM_015447, intron 1 of 16) L1MEf|LINE|L1 16168 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr9-6858 chr9 77450133 77450343 + 6.48 0.000 intron (NR_121184, intron 1 of 4) intron (NR_121184, intron 1 of 4) 2589 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr3-5191 chr3 70673714 70673924 + 6.48 0.000 Intergenic L2a|LINE|L2 -361181 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr16-7100 chr16 89351166 89351376 + 6.48 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) 30138 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr22-3849 chr22 32637001 32637211 + 6.48 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) 161869 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr9-4656 chr9 116387817 116388027 + 6.48 0.000 intron (NM_002581, intron 21 of 21) intron (NM_002581, intron 21 of 21) 12684 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr9-6182 chr9 86141351 86141561 + 6.48 0.000 intron (NR_110996, intron 2 of 4) AluSx|SINE|Alu 13916 NR_110996 101927623 Hs.575644 NR_110996 LOC101927623 - uncharacterized LOC101927623 ncRNA chr19-2428 chr19 42362624 42362834 + 6.48 0.000 intron (NM_001271938, intron 34 of 41) MSR1|Satellite|Satellite 11598 NR_107044 102465875 NR_107044 ENSG00000277533 MIR8077 hsa-mir-8077 microRNA 8077 ncRNA chr2-4372 chr2 27351007 27351217 + 6.48 0.000 intron (NM_001521, intron 1 of 19) AluJr|SINE|Alu 5380 NM_001318909 2976 Hs.75782 NM_001521 ENSG00000115207 GTF3C2 TFIIIC-BETA|TFIIIC110 general transcription factor IIIC subunit 2 protein-coding chrX-3500 chrX 40507740 40507950 + 6.48 0.000 Intergenic Intergenic -73125 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding chr5-7601 chr5 43226152 43226362 + 6.48 0.000 intron (NR_072980, intron 1 of 3) L2c|LINE|L2 33405 NR_072980 167359 Hs.25845 NM_153361 ENSG00000177453 NIM1K NIM1 NIM1 serine/threonine protein kinase protein-coding chr5-7906 chr5 76537420 76537630 + 6.48 0.000 intron (NM_006633, intron 2 of 35) intron (NM_006633, intron 2 of 35) -9884 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr10-8952 chr10 118237225 118237435 + 6.48 0.000 Intergenic Intergenic 104994 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr3-8364 chr3 82067761 82067971 + 6.48 0.000 intron (NR_147146, intron 1 of 8) intron (NR_147146, intron 1 of 8) 81724 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr20-2573 chr20 37312075 37312285 + 6.48 0.000 intron (NM_022077, intron 3 of 3) intron (NM_022077, intron 3 of 3) 22525 NM_022077 63905 Hs.6126 NM_022077 ENSG00000101363 MANBAL - mannosidase beta like protein-coding chr6-7009 chr6 22041736 22041946 + 6.48 0.000 intron (NR_015410, intron 7 of 11) intron (NR_015410, intron 7 of 11) 105352 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr4-4182 chr4 10522557 10522767 + 6.48 0.000 intron (NM_052964, intron 14 of 18) L2c|LINE|L2 -65236 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr1-12321 chr1 247415573 247415783 + 6.48 0.000 promoter-TSS (NM_001079821) promoter-TSS (NM_001079821) -478 NM_001127461 114548 Hs.159483 NM_004895 ENSG00000162711 NLRP3 AGTAVPRL|AII|AVP|C1orf7|CIAS1|CLR1.1|DFNA34|FCAS|FCAS1|FCU|KEFH|MWS|NALP3|PYPAF1 NLR family pyrin domain containing 3 protein-coding chr9-6636 chr9 132397336 132397546 + 6.48 0.000 intron (NR_134525, intron 4 of 10) intron (NR_134525, intron 4 of 10) 9399 NR_134525 7270 Hs.54780 NM_007344 ENSG00000125482 TTF1 TTF-1|TTF-I transcription termination factor 1 protein-coding chr1-10821 chr1 203455214 203455424 + 6.48 0.000 Intergenic Intergenic -20487 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr1-10069 chr1 93087654 93087864 + 6.48 0.000 intron (NM_001164393, intron 1 of 12) intron (NM_001164393, intron 1 of 12) 8476 NM_007358 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr11-3520 chr11 2911362 2911572 + 6.48 0.000 intron (NM_002555, intron 5 of 10) intron (NM_002555, intron 5 of 10) -7892 NM_007105 5003 Hs.300076 NM_007105 ENSG00000254827 SLC22A18AS BWR1B|BWSCR1B|ORCTL2S|SLC22A1LS|p27-BWR1B solute carrier family 22 member 18 antisense protein-coding chr1-15710 chr1 169661091 169661301 + 6.48 0.000 Intergenic LTR12C|LTR|ERV1 -31072 NM_003005 6403 Hs.73800 NM_003005 ENSG00000174175 SELP CD62|CD62P|GMP140|GRMP|LECAM3|PADGEM|PSEL selectin P protein-coding chr4-8611 chr4 172078318 172078528 + 6.48 0.000 intron (NM_001034845, intron 2 of 12) THE1D|LTR|ERVL-MaLR -264816 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr1-13046 chr1 170864969 170865179 + 6.48 0.000 Intergenic L2c|LINE|L2 -70397 NM_001163629 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding chrX-5205 chrX 134725367 134725577 + 6.48 0.000 intron (NM_001316887, intron 2 of 3) MER5A|DNA|hAT-Charlie 8164 NM_001316888 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr22-3993 chr22 38972936 38973146 + 6.48 0.000 intron (NM_001193289, intron 4 of 4) AluJb|SINE|Alu -9306 NM_004900 9582 Hs.226307 NM_004900 ENSG00000179750 APOBEC3B A3B|APOBEC1L|ARCD3|ARP4|DJ742C19.2|PHRBNL|bK150C2.2 apolipoprotein B mRNA editing enzyme catalytic subunit 3B protein-coding chr19-6817 chr19 42005526 42005736 + 6.48 0.000 intron (NM_002088, intron 16 of 18) intron (NM_002088, intron 16 of 18) -11401 NM_152296 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr15-2844 chr15 40828514 40828724 + 6.48 0.000 promoter-TSS (NM_001130143) promoter-TSS (NM_001130143) 89 NM_001130143 54866 Hs.192927 NM_017726 ENSG00000166143 PPP1R14D CPI17-like|GBPI-1|GBPI1 protein phosphatase 1 regulatory inhibitor subunit 14D protein-coding chr22-3757 chr22 27282276 27282486 + 6.48 0.000 Intergenic Intergenic -28270 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr1-14009 chr1 26225367 26225577 + 6.48 0.000 non-coding (NR_110698, exon 1 of 4) non-coding (NR_110698, exon 1 of 4) 152 NR_110698 101928303 Hs.375067 NR_110698 ENSG00000236155 LOC101928303 - uncharacterized LOC101928303 ncRNA chr21-1492 chr21 39756639 39756849 + 6.48 0.000 intron (NM_001080444, intron 2 of 8) intron (NM_001080444, intron 2 of 8) 11337 NM_001080444 150084 Hs.422120 NM_001080444 ENSG00000183067 IGSF5 GSF5|JAM4 immunoglobulin superfamily member 5 protein-coding chr22-1315 chr22 46635042 46635252 + 6.48 0.000 intron (NM_015124, intron 2 of 18) intron (NM_015124, intron 2 of 18) 14761 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr18-2320 chr18 2112725 2112935 + 6.48 0.000 Intergenic Intergenic 458675 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr1-9305 chr1 26900010 26900220 + 6.48 0.000 exon (NM_022078, exon 1 of 7) exon (NM_022078, exon 1 of 7) 352 NM_022078 63906 Hs.10903 NM_022078 ENSG00000198746 GPATCH3 GPATC3 G-patch domain containing 3 protein-coding chr16-3700 chr16 1758414 1758624 + 6.48 0.000 intron (NM_015133, intron 9 of 31) intron (NM_015133, intron 9 of 31) 13190 NM_002513 4832 Hs.514065 NM_002513 ENSG00000103024 NME3 DR-nm23|NDPK-C|NDPKC|NM23-H3|NM23H3|c371H6.2 NME/NM23 nucleoside diphosphate kinase 3 protein-coding chr2-6354 chr2 96608452 96608662 + 6.48 0.000 exon (NM_001349260, exon 13 of 21) exon (NM_001349260, exon 13 of 21) 29434 NR_047658 55683 Hs.516341 NM_017991 ENSG00000114982 KANSL3 KIAA1310|NSL3|Rcd1 KAT8 regulatory NSL complex subunit 3 protein-coding chr2-6403 chr2 128608137 128608347 + 6.48 0.000 Intergenic Intergenic -256358 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr15-2934 chr15 47184868 47185078 + 6.48 0.000 intron (NM_001198999, intron 1 of 19) CpG 884 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr2-7677 chr2 30022500 30022710 + 6.48 0.000 Intergenic L2c|LINE|L2 -101019 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr1-7440 chr1 50708400 50708610 + 6.48 0.000 intron (NM_007051, intron 6 of 18) L2|LINE|L2 251762 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr19-3068 chr19 3801597 3801807 + 6.48 0.000 promoter-TSS (NM_002378) promoter-TSS (NM_002378) 97 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr4-8763 chr4 187302445 187302655 + 6.48 0.000 Intergenic Intergenic -68098 NR_149103 105377602 Hs.582096 NR_149103 ENSG00000250042 LINC02514 - long intergenic non-protein coding RNA 2514 ncRNA chr6-2670 chr6 7282858 7283068 + 6.48 0.000 non-coding (NR_120448, exon 7 of 7) non-coding (NR_120448, exon 7 of 7) 30236 NM_003144 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr7-3796 chr7 91771961 91772171 + 6.48 0.000 Intergenic Intergenic 108636 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr9-8376 chr9 118165933 118166143 + 6.48 0.000 Intergenic Intergenic 461635 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr12-6165 chr12 10004458 10004668 + 6.48 0.000 Intergenic LTR1B|LTR|ERV1 -5263 NM_016509 51266 Hs.409794 NM_016509 ENSG00000165682 CLEC1B 1810061I13Rik|CLEC2|CLEC2B|PRO1384|QDED721 C-type lectin domain family 1 member B protein-coding chr10-4571 chr10 106474858 106475068 + 6.48 0.000 Intergenic Intergenic 334798 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr20-3551 chr20 2666693 2666903 + 6.48 0.000 Intergenic LTR86B2|LTR|ERVL -2575 NM_001258384 3420 Hs.436405 NM_006899 ENSG00000101365 IDH3B RP46 isocitrate dehydrogenase (NAD(+)) 3 beta protein-coding chr7-8482 chr7 50364627 50364837 + 6.48 0.000 intron (NM_001291840, intron 2 of 2) intron (NM_001291840, intron 2 of 2) 45684 NM_001291842 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr5-6394 chr5 142687407 142687617 + 6.48 0.000 intron (NM_001354951, intron 2 of 5) Tigger14a|DNA|TcMar-Tigger -1017 NM_001257207 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr1-15318 chr1 119258239 119258449 + 6.48 0.000 intron (NR_125975, intron 4 of 6) AluY|SINE|Alu -69908 NR_146623 105378934 NR_146623 ENSG00000232650 LINC01780 - long intergenic non-protein coding RNA 1780 ncRNA chr8-7488 chr8 142681793 142682003 + 6.48 0.000 intron (NM_005672, intron 2 of 2) intron (NM_005672, intron 2 of 2) 1403 NM_005672 8000 Hs.652235 NM_005672 ENSG00000167653 PSCA PRO232 prostate stem cell antigen protein-coding chr11-8952 chr11 19420357 19420567 + 6.48 0.000 intron (NM_001111018, intron 1 of 37) L1ME3A|LINE|L1 69738 NM_001111018 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr2-10584 chr2 241419316 241419526 + 6.48 0.000 intron (NM_014808, intron 8 of 26) intron (NM_014808, intron 8 of 26) -58484 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr4-5801 chr4 81960387 81960597 + 6.48 0.000 Intergenic AluY|SINE|Alu 413499 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr17-2575 chr17 64772657 64772867 + 6.48 0.000 intron (NR_026899, intron 3 of 12) intron (NR_026899, intron 3 of 12) -7997 NR_106728 102464831 NR_106728 ENSG00000278581 MIR6080 hsa-mir-6080 microRNA 6080 ncRNA chr12-1647 chr12 9404373 9404583 + 6.48 0.000 intron (NR_144634, intron 2 of 8) intron (NR_144634, intron 2 of 8) 2936 NR_144634 728715 NR_144634 LOC728715 - ovostatin homolog 2 ncRNA chr6-7804 chr6 99140445 99140655 + 6.48 0.000 Intergenic UCON28a|Unknown|Unknown 15941 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chr1-7234 chr1 225201496 225201706 + 6.48 0.000 intron (NM_001367479, intron 38 of 85) L1PB1|LINE|L1 226437 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr15-4147 chr15 86915920 86916130 + 6.48 0.000 intron (NM_152336, intron 23 of 24) intron (NM_152336, intron 23 of 24) -16855 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr2-14449 chr2 223076772 223076982 + 6.48 0.000 Intergenic Intergenic 24947 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr3-8562 chr3 151219045 151219255 + 6.48 0.000 intron (NM_001081455, intron 2 of 2) intron (NM_001081455, intron 2 of 2) -15934 NM_013308 29909 Hs.549152 NM_013308 ENSG00000174946 GPR171 H963 G protein-coupled receptor 171 protein-coding chr13-3293 chr13 47718522 47718732 + 6.48 0.000 Intergenic Intergenic 213995 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr10-7885 chr10 49186283 49186493 + 6.48 0.000 intron (NM_001288742, intron 1 of 4) intron (NM_001288742, intron 1 of 4) 2003 NM_001288740 170371 Hs.385493 NM_001010863 ENSG00000204161 TMEM273 C10orf128 transmembrane protein 273 protein-coding chr14-3868 chr14 88203491 88203701 + 6.48 0.000 intron (NM_138317, intron 4 of 6) LTR104_Mam|LTR|Gypsy 67315 NM_138318 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr8-5850 chr8 6554610 6554820 + 6.48 0.000 intron (NM_001147, intron 1 of 8) intron (NM_001147, intron 1 of 8) 8530 NM_001147 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr1-14504 chr1 50163909 50164119 + 6.48 0.000 intron (NM_001144774, intron 2 of 6) MIRb|SINE|MIR 54181 NM_001324217 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding chr2-13928 chr2 183497244 183497454 + 6.48 0.000 Intergenic Intergenic 372906 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr9-6784 chr9 27653193 27653403 + 6.48 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -79432 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr22-3109 chr22 10961374 10961584 + 6.48 0.000 promoter-TSS (NR_132320) promoter-TSS (NR_132320) 50 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr22-3332 chr22 22667352 22667562 + 6.48 0.000 Intergenic Intergenic 21145 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr2-10656 chr2 18792032 18792242 + 6.48 0.000 Intergenic Intergenic -202557 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr6-6758 chr6 3152474 3152684 + 6.48 0.000 non-coding (NR_026648, exon 9 of 9) non-coding (NR_026648, exon 9 of 9) 4965 NM_001069 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr7-8261 chr7 37208653 37208863 + 6.48 0.000 intron (NM_001206480, intron 13 of 21) intron (NM_001206480, intron 13 of 21) 144910 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr8-4258 chr8 92955759 92955969 + 6.48 0.000 intron (NM_001171797, intron 1 of 4) L1MB7|LINE|L1 9725 NM_001191036 286144 Hs.440643 NM_001171795 ENSG00000205133 TRIQK C8orf83|PRO0845|UPF0599 triple QxxK/R motif containing protein-coding chr6-7697 chr6 86699983 86700193 + 6.48 0.000 Intergenic MER94|DNA|hAT-Blackjack -237440 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr9-7996 chr9 93856304 93856514 + 6.48 0.000 Intergenic L1PA17|LINE|L1 37052 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA chr7-4631 chr7 28692055 28692265 + 6.48 0.000 intron (NM_001011666, intron 1 of 6) AluSx3|SINE|Alu 6027 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr3-8003 chr3 184801674 184801884 + 6.48 0.000 Intergenic Intergenic -10364 NM_001009921 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr13-4112 chr13 80024106 80024316 + 6.48 0.000 intron (NR_104138, intron 1 of 1) intron (NR_104138, intron 1 of 1) 13134 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr16-6111 chr16 14123501 14123711 + 6.48 0.000 intron (NM_001365418, intron 3 of 5) L1PA7|LINE|L1 52287 NM_001365419 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr13-2430 chr13 45856615 45856825 + 6.48 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -4967 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr3-4619 chr3 13072287 13072497 + 6.48 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) 1037 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr1-14161 chr1 32623155 32623365 + 6.48 0.000 intron (NM_001366266, intron 4 of 4) L2a|LINE|L2 27290 NM_001366278 339487 Hs.655921 NM_178547 ENSG00000176261 ZBTB8OS ARCH|ARCH2 zinc finger and BTB domain containing 8 opposite strand protein-coding chr15-4070 chr15 69742539 69742749 + 6.48 0.000 Intergenic Intergenic -92590 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr5-6961 chr5 142642058 142642268 + 6.48 0.000 intron (NM_001144935, intron 1 of 3) intron (NM_001144935, intron 1 of 3) 2138 NM_001257210 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr1-14813 chr1 72576206 72576416 + 6.48 0.000 Intergenic Intergenic -293772 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr7-7605 chr7 131597342 131597552 + 6.48 0.000 Intergenic AluSx3|SINE|Alu -40819 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr18-1372 chr18 38985396 38985606 + 6.48 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 636674 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr8-5985 chr8 22024136 22024346 + 6.48 0.000 promoter-TSS (NM_001286681) promoter-TSS (NM_001286681) 107 NM_001286680 10361 Hs.131055 NM_182795 ENSG00000158806 NPM2 - nucleophosmin/nucleoplasmin 2 protein-coding chr9-6439 chr9 78475096 78475306 + 6.48 0.000 Intergenic Intergenic 178076 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr1-15017 chr1 92856876 92857086 + 6.48 0.000 intron (NM_001252269, intron 1 of 3) L1ME3Cz|LINE|L1 16262 NR_002444 26782 Hs.180946 NR_002444 ENSG00000207523 SNORA66 RNU66|U66 small nucleolar RNA, H/ACA box 66 snoRNA chr6-6531 chr6 130129990 130130200 + 6.48 0.000 intron (NM_001007102, intron 19 of 21) intron (NM_001007102, intron 19 of 21) 85790 NM_001277185 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr1-9633 chr1 46538213 46538423 + 6.48 0.000 promoter-TSS (NR_038403) promoter-TSS (NR_038403) -378 NR_038403 100507423 Hs.601863 NR_038403 ENSG00000269956 MKNK1-AS1 - MKNK1 antisense RNA 1 ncRNA chr17-5443 chr17 39237857 39238067 + 6.48 0.000 Intergenic Intergenic -12017 NM_198993 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr18-3470 chr18 70074297 70074507 + 6.48 0.000 intron (NM_001318520, intron 32 of 47) intron (NM_001318520, intron 32 of 47) -117603 NM_006566 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr9-8385 chr9 118678815 118679025 + 6.48 0.000 promoter-TSS (NR_151725) promoter-TSS (NR_151725) -751 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr9-6499 chr9 99050535 99050745 + 6.48 0.000 intron (NM_001855, intron 30 of 41) intron (NM_001855, intron 30 of 41) -54473 NM_001306210 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr17-5895 chr17 72819789 72819999 + 6.48 0.000 intron (NM_001352692, intron 6 of 9) intron (NM_001352692, intron 6 of 9) -179422 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr22-4248 chr22 47657331 47657541 + 6.48 0.000 intron (NR_122046, intron 2 of 8) intron (NR_122046, intron 2 of 8) 25762 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA chr4-7961 chr4 111952805 111953015 + 6.48 0.000 Intergenic Intergenic -192544 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr11-8279 chr11 69821049 69821259 + 6.48 0.000 Intergenic Intergenic -1738 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chrX-3195 chrX 44330985 44331195 + 6.48 0.000 intron (NM_025184, intron 1 of 14) L1MD2|LINE|L1 12582 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr6-3554 chr6 45631308 45631518 + 6.48 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 209138 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr4-8745 chr4 185920297 185920507 + 6.48 0.000 intron (NM_001270771, intron 1 of 23) intron (NM_001270771, intron 1 of 23) 35970 NM_021069 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr13-4351 chr13 103334045 103334255 + 6.48 0.000 Intergenic Intergenic -91050 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr7-7977 chr7 14138417 14138627 + 6.48 0.000 Intergenic L2c|LINE|L2 -147097 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chrX-2609 chrX 107355350 107355560 + 6.48 0.000 Intergenic Intergenic 148823 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr19-4052 chr19 7230393 7230603 + 6.48 0.000 intron (NM_001079817, intron 2 of 20) MIRb|SINE|MIR 63916 NM_000208 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr10-8240 chr10 74078901 74079111 + 6.48 0.000 intron (NM_014000, intron 6 of 21) intron (NM_014000, intron 6 of 21) 71822 NR_135191 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr18-3095 chr18 35073893 35074103 + 6.48 0.000 intron (NM_001143827, intron 3 of 7) intron (NM_001143827, intron 3 of 7) 32585 NR_046177 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr2-13844 chr2 176983350 176983560 + 6.48 0.000 Intergenic AluJb|SINE|Alu 228956 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr12-6886 chr12 21751367 21751577 + 6.48 0.000 Intergenic Intergenic 23234 NM_004982 3764 Hs.102308 NM_004982 ENSG00000121361 KCNJ8 KIR6.1|uKATP-1 potassium voltage-gated channel subfamily J member 8 protein-coding chr17-5119 chr17 6899830 6900040 + 6.48 0.000 non-coding (NR_002710, exon 14 of 14) non-coding (NR_002710, exon 14 of 14) 6158 NR_120453 245 Hs.378695 NR_002710 ENSG00000262943 ALOX12P2 ALOX12E arachidonate 12-lipoxygenase pseudogene 2 pseudo chr7-8808 chr7 83117342 83117552 + 6.48 0.000 intron (NM_033026, intron 3 of 24) LTR40c|LTR|ERVL 45437 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr7-6779 chr7 22627199 22627409 + 6.48 0.000 Intergenic Intergenic 38229 NR_122075 401312 Hs.583393 NR_122075 ENSG00000105889 LOC401312 - uncharacterized LOC401312 ncRNA chr9-5018 chr9 26573092 26573302 + 6.48 0.000 Intergenic MamRep4096|DNA|hAT-Tip100 319605 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr19-5423 chr19 18162839 18163049 + 6.48 0.000 intron (NR_162071, intron 8 of 14) intron (NR_162071, intron 8 of 14) 9781 NM_005027 5296 Hs.371344 NM_005027 ENSG00000105647 PIK3R2 MPPH|MPPH1|P85B|p85|p85-BETA phosphoinositide-3-kinase regulatory subunit 2 protein-coding chr11-7896 chr11 127312221 127312431 + 6.48 0.000 intron (NR_120580, intron 1 of 2) intron (NR_120580, intron 1 of 2) 41256 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr6-7212 chr6 39952286 39952496 + 6.48 0.000 Intergenic MER58A|DNA|hAT-Charlie -17929 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr1-11046 chr1 223670543 223670753 + 6.48 0.000 Intergenic Intergenic -4947 NM_001143962 388743 Hs.291487 NM_001143962 ENSG00000203697 CAPN8 nCL-2 calpain 8 protein-coding chr1-14618 chr1 55507534 55507744 + 6.48 0.000 Intergenic Intergenic 281998 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr6-5308 chr6 143108545 143108755 + 6.48 0.000 intron (NM_001366344, intron 2 of 6) intron (NM_001366344, intron 2 of 6) -17489 NM_001366358 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr12-4722 chr12 50725815 50726025 + 6.48 0.000 intron (NM_173602, intron 28 of 37) intron (NM_173602, intron 28 of 37) -38181 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr15-2649 chr15 73751310 73751520 + 6.48 0.000 promoter-TSS (NM_001039614) promoter-TSS (NM_001039614) 60 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr9-7719 chr9 73227405 73227615 + 6.48 0.000 Intergenic L1PA13|LINE|L1 75645 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr12-5779 chr12 6563575 6563785 + 6.48 0.000 exon (NM_001258309, exon 8 of 17) exon (NM_001258309, exon 8 of 17) 4611 NM_001258310 4839 Hs.534334 NM_006170 ENSG00000111641 NOP2 NOL1|NOP120|NSUN1|p120 NOP2 nucleolar protein protein-coding chr1-16524 chr1 231318988 231319198 + 6.48 0.000 Intergenic Intergenic 18759 NM_175876 149371 Hs.356198 NM_175876 ENSG00000116903 EXOC8 EXO84|Exo84p|SEC84 exocyst complex component 8 protein-coding chr7-6994 chr7 116051849 116052059 + 6.48 0.000 Intergenic L2|LINE|L2 -21191 NM_001018058 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr1-14616 chr1 55103259 55103469 + 6.48 0.000 intron (NM_015306, intron 42 of 67) L2c|LINE|L2 63142 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr7-8071 chr7 24210677 24210887 + 6.48 0.000 Intergenic Intergenic -73408 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr2-13679 chr2 163813230 163813440 + 6.48 0.000 Intergenic HAL1b|LINE|L1 -77327 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr18-2636 chr18 40291667 40291877 + 6.48 0.000 Intergenic L1MA9|LINE|L1 225486 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr10-7289 chr10 130835154 130835364 + 6.48 0.000 Intergenic Intergenic 127409 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr11-8680 chr11 4431378 4431588 + 6.48 0.000 Intergenic Intergenic -17812 NM_001005172 119774 Hs.553568 NM_001005172 ENSG00000181963 OR52K2 OR11-7 olfactory receptor family 52 subfamily K member 2 protein-coding chr2-10996 chr2 100285837 100286047 + 6.48 0.000 intron (NM_198461, intron 11 of 11) intron (NM_198461, intron 11 of 11) 36791 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr16-6804 chr16 79628629 79628839 + 6.48 0.000 Intergenic Intergenic -27997 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr20-2523 chr20 34723865 34724075 + 6.48 0.000 intron (NM_001242539, intron 11 of 11) intron (NM_001242539, intron 11 of 11) 19251 NM_001329431 58476 Hs.516994 NM_021202 ENSG00000078804 TP53INP2 C20orf110|DOR|PIG-U|PIGU|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding chr16-4599 chr16 68519424 68519634 + 6.48 0.000 Intergenic L2b|LINE|L2 -19684 NM_001305204 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr3-3735 chr3 194070986 194071196 + 6.48 0.000 promoter-TSS (NR_136179) promoter-TSS (NR_136179) -121 NR_136180 285389 Hs.157102 NR_136179 ENSG00000230102 LINC02028 - long intergenic non-protein coding RNA 2028 ncRNA chr15-2578 chr15 58477404 58477614 + 6.48 0.000 intron (NR_120338, intron 2 of 2) intron (NR_120338, intron 2 of 2) 21226 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr11-7573 chr11 31779365 31779575 + 6.48 0.000 intron (NM_001288725, intron 10 of 10) intron (NM_001288725, intron 10 of 10) 21191 NM_001368930 5080 Hs.270303 NM_000280 ENSG00000007372 PAX6 AN|AN2|ASGD5|D11S812E|FVH1|MGDA|WAGR paired box 6 protein-coding chr9-3638 chr9 92424346 92424556 + 6.48 0.000 5' UTR (NM_005014, exon 1 of 3) 5' UTR (NM_005014, exon 1 of 3) 103 NM_005014 4958 Hs.94070 NM_005014 ENSG00000127083 OMD OSAD|SLRR2C osteomodulin protein-coding chr2-12908 chr2 99806676 99806886 + 6.48 0.000 intron (NM_001025108, intron 7 of 23) L2b|LINE|L2 298802 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr2-9370 chr2 229340449 229340659 + 6.48 0.000 Intergenic Intergenic -69267 NM_017933 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr7-9444 chr7 134365433 134365643 + 6.48 0.000 Intergenic MIR3|SINE|MIR -48608 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr2-11918 chr2 24907190 24907400 + 6.48 0.000 intron (NM_001320613, intron 2 of 21) intron (NM_001320613, intron 2 of 21) 12942 NM_001320613 109 Hs.467898 NM_004036 ENSG00000138031 ADCY3 AC-III|AC3|BMIQ19 adenylate cyclase 3 protein-coding chr3-7784 chr3 79200565 79200775 + 6.48 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) -181211 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr8-6014 chr8 23102165 23102375 + 6.48 0.000 promoter-TSS (NM_003841) promoter-TSS (NM_003841) -544 NM_003841 8794 Hs.655801 NM_003841 ENSG00000173535 TNFRSF10C CD263|DCR1|DCR1-TNFR|LIT|TRAIL-R3|TRAILR3|TRID TNF receptor superfamily member 10c protein-coding chr1-9555 chr1 40857989 40858199 + 6.48 0.000 Intergenic LTR16A|LTR|ERVL 4269 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr9-4660 chr9 117703603 117703813 + 6.48 0.000 promoter-TSS (NM_003266) promoter-TSS (NM_003266) -695 NM_003266 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr17-6997 chr17 50892176 50892386 + 6.48 0.000 Intergenic Intergenic -24303 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr22-3656 chr22 22733878 22734088 + 6.48 0.000 Intergenic Intergenic 87671 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr1-3007 chr1 220376490 220376700 + 6.48 0.000 Intergenic AluJb|SINE|Alu -104142 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr19-6895 chr19 45358895 45359105 + 6.48 0.000 intron (NM_001130867, intron 11 of 11) L2b|LINE|L2 11587 NM_000400 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2, TFIIH core complex helicase subunit protein-coding chr2-13358 chr2 136112507 136112717 + 6.48 0.000 Intergenic Intergenic 3623 NM_001008540 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr16-1329 chr16 15154768 15154978 + 6.48 0.000 TTS (NR_037466) TTS (NR_037466) 129 NR_037466 100500852 NR_037466 ENSG00000264115 MIR3180-4 mir-3180-4 microRNA 3180-4 ncRNA chr2-14164 chr2 204257096 204257306 + 6.48 0.000 Intergenic Intergenic -288274 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr11-5821 chr11 8026030 8026240 + 6.48 0.000 Intergenic L1ME1|LINE|L1 -9626 NR_125366 103581031 Hs.249366 NR_125366 ENSG00000255420 CASC23 LINC01464 cancer susceptibility 23 ncRNA chr9-4200 chr9 36003535 36003745 + 6.48 0.000 Intergenic Intergenic -33273 NM_021111 8434 Hs.388918 NM_021111 ENSG00000122707 RECK ST15 reversion inducing cysteine rich protein with kazal motifs protein-coding chr1-16192 chr1 207340408 207340618 + 6.48 0.000 exon (NM_001300902, exon 10 of 10) exon (NM_001300902, exon 10 of 10) 18835 NM_001114752 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chrX-4464 chrX 57376728 57376938 + 6.48 0.000 intron (NR_148564, intron 5 of 11) L1PA7|LINE|L1 89979 NR_148564 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding chr20-2433 chr20 24076884 24077094 + 6.48 0.000 Intergenic Intergenic -88210 NM_178311 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr21-1764 chr21 36080912 36081122 + 6.48 0.000 intron (NR_040084, intron 2 of 3) AluJr|SINE|Alu 10993 NM_001757 873 Hs.88778 NM_001757 ENSG00000159228 CBR1 CBR|SDR21C1|hCBR1 carbonyl reductase 1 protein-coding chr14-4643 chr14 54550357 54550567 + 6.48 0.000 Intergenic L2a|LINE|L2 -17150 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr7-3884 chr7 109086381 109086591 + 6.48 0.000 Intergenic L1PA7|LINE|L1 -201899 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr7-3942 chr7 129853838 129854048 + 6.48 0.000 intron (NM_182697, intron 3 of 4) intron (NM_182697, intron 3 of 4) -78929 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr10-7478 chr10 10453607 10453817 + 6.48 0.000 intron (NR_120637, intron 1 of 3) L1MEc|LINE|L1 8637 NR_120637 101928322 Hs.576789 NR_120637 ENSG00000270111 CELF2-DT - CELF2 divergent transript ncRNA chr17-7914 chr17 44248574 44248784 + 6.48 0.000 3' UTR (NM_000342, exon 20 of 20) 3' UTR (NM_000342, exon 20 of 20) 19456 NM_000342 6521 Hs.210751 NM_000342 ENSG00000004939 SLC4A1 AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR solute carrier family 4 member 1 (Diego blood group) protein-coding chr14-1749 chr14 69807484 69807694 + 6.48 0.000 Intergenic L1M7|LINE|L1 -4171 NR_149012 100506358 NR_149012 LOC100506358 - uncharacterized LOC100506358 ncRNA chr16-2782 chr16 28905469 28905679 + 6.48 0.000 intron (NM_024816, intron 11 of 12) intron (NM_024816, intron 11 of 12) 19664 NM_024816 79874 Hs.555978 NM_024816 ENSG00000177548 RABEP2 FRA rabaptin, RAB GTPase binding effector protein 2 protein-coding chr21-1234 chr21 45619123 45619333 + 6.48 0.000 Intergenic Intergenic -24497 NM_001348239 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr5-5149 chr5 107626364 107626574 + 6.48 0.000 intron (NM_001962, intron 1 of 4) AluJr4|SINE|Alu 44468 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr4-5750 chr4 58040116 58040326 + 6.48 0.000 Intergenic LTR16|LTR|ERVL 496107 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr17-7084 chr17 67534233 67534443 + 6.48 0.000 intron (NM_181671, intron 2 of 9) intron (NM_181671, intron 2 of 9) -62753 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr17-7092 chr17 68932350 68932560 + 6.48 0.000 exon (NM_007168, exon 6 of 38) exon (NM_007168, exon 6 of 38) 22937 NM_007168 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr1-7336 chr1 7195833 7196043 + 6.48 0.000 intron (NM_001349608, intron 3 of 21) AluSx|SINE|Alu 193816 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr3-10698 chr3 152276645 152276855 + 6.48 0.000 intron (NM_001314057, intron 1 of 11) intron (NM_001314057, intron 1 of 11) -7124 NR_027037 401093 Hs.725347 NR_027037 ENSG00000229619 MBNL1-AS1 - MBNL1 antisense RNA 1 ncRNA chr3-9338 chr3 46170465 46170675 + 6.48 0.000 Intergenic Intergenic 37743 NM_001295 1230 Hs.301921 NM_001295 ENSG00000163823 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 C-C motif chemokine receptor 1 protein-coding chr1-16354 chr1 219847524 219847734 + 6.48 0.000 Intergenic L1PB2|LINE|L1 81022 NR_046437 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr11-9316 chr11 45831650 45831860 + 6.48 0.000 Intergenic Intergenic -15363 NM_001127457 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr11-6446 chr11 66648253 66648463 + 6.48 0.000 intron (NM_001198844, intron 2 of 2) AluJb|SINE|Alu 9655 NM_001198844 5936 Hs.523822 NM_002896 ENSG00000173933 RBM4 LARK|RBM4A|ZCCHC21|ZCRB3A RNA binding motif protein 4 protein-coding chr20-3115 chr20 31970902 31971112 + 6.48 0.000 intron (NM_001011718, intron 1 of 2) MIR|SINE|MIR 2856 NM_001011718 343702 Hs.666444 NM_001011718 ENSG00000260903 XKR7 C20orf159|dJ310O13.4 XK related 7 protein-coding chr11-8189 chr11 64371667 64371877 + 6.48 0.000 3' UTR (NM_001300802, exon 17 of 17) 3' UTR (NM_001300802, exon 17 of 17) 3170 NR_031602 100302280 NR_031602 ENSG00000221273 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA chrX-4619 chrX 75497865 75498075 + 6.48 0.000 intron (NM_001146256, intron 1 of 10) AluSp|SINE|Alu 25067 NM_144969 158866 Hs.253211 NM_144969 ENSG00000102383 ZDHHC15 DHHC15|MRX91 zinc finger DHHC-type containing 15 protein-coding chr3-9230 chr3 38097696 38097906 + 6.48 0.000 exon (NM_001321153, exon 18 of 37) exon (NM_001321153, exon 18 of 37) 39326 NM_001607 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr4-3655 chr4 25728630 25728840 + 6.48 0.000 Intergenic AluSz6|SINE|Alu 72271 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr11-7416 chr11 101182207 101182417 + 6.48 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -52499 NM_000926 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr20-1914 chr20 3698088 3698298 + 6.48 0.000 intron (NM_023068, intron 8 of 21) intron (NM_023068, intron 8 of 21) 9041 NM_001367089 6614 Hs.31869 NM_023068 ENSG00000088827 SIGLEC1 CD169|SIGLEC-1|SN sialic acid binding Ig like lectin 1 protein-coding chr18-2532 chr18 77008967 77009177 + 6.48 0.000 intron (NM_001025090, intron 1 of 5) intron (NM_001025090, intron 1 of 5) 7983 NM_001025081 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr11-8548 chr11 132127026 132127236 + 6.48 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) -157171 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr12-4647 chr12 45031494 45031704 + 6.48 0.000 intron (NM_001004329, intron 2 of 3) L3|LINE|CR1 19500 NM_001004329 440097 Hs.302764 NM_001004329 ENSG00000185610 DBX2 - developing brain homeobox 2 protein-coding chr3-7890 chr3 129453109 129453319 + 6.48 0.000 intron (NM_052990, intron 3 of 26) L2a|LINE|L2 12990 NM_001280541 55764 Hs.655284 NM_018262 ENSG00000163913 IFT122 CED|CED1|SPG|WDR10|WDR10p|WDR140 intraflagellar transport 122 protein-coding chr4-8638 chr4 174721769 174721979 + 6.48 0.000 intron (NM_006529, intron 4 of 9) (TA)n|Simple_repeat|Simple_repeat 107373 NM_006529 8001 Hs.413099 NM_006529 ENSG00000145451 GLRA3 - glycine receptor alpha 3 protein-coding chr13-3985 chr13 65197410 65197620 + 6.48 0.000 Intergenic Intergenic -668532 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr1-12016 chr1 99002081 99002291 + 6.48 0.000 intron (NM_001037317, intron 1 of 5) intron (NM_001037317, intron 1 of 5) -2090 NR_033940 100129620 Hs.588631 NR_033940 ENSG00000232825 LOC100129620 - uncharacterized LOC100129620 ncRNA chr10-3128 chr10 48363899 48364109 + 6.48 0.000 intron (NM_001323302, intron 3 of 13) intron (NM_001323302, intron 3 of 13) -37608 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr19-6385 chr19 13072583 13072793 + 6.48 0.000 intron (NM_001365984, intron 1 of 9) MER20|DNA|hAT-Charlie 30170 NM_005583 4066 Hs.46446 NM_005583 ENSG00000104903 LYL1 bHLHa18 LYL1 basic helix-loop-helix family member protein-coding chr6-6209 chr6 15933763 15933973 + 6.48 0.000 Intergenic Intergenic -195218 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr2-11225 chr2 162882709 162882919 + 6.48 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -44047 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr2-6635 chr2 241457995 241458205 + 6.48 0.000 intron (NM_014808, intron 14 of 26) intron (NM_014808, intron 14 of 26) -19805 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr3-4965 chr3 11698683 11698893 + 6.48 0.000 intron (NM_001284390, intron 2 of 6) intron (NM_001284390, intron 2 of 6) 21751 NM_001284390 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr11-9719 chr11 68249430 68249640 + 6.48 0.000 Intergenic THE1D|LTR|ERVL-MaLR 22438 NM_022338 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr4-2448 chr4 169882446 169882656 + 6.48 0.000 Intergenic MSTC-int|LTR|ERVL-MaLR 93351 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr3-7761 chr3 66801186 66801396 + 6.48 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -62955 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr6-6022 chr6 113980973 113981183 + 6.48 0.000 intron (NR_125845, intron 1 of 9) MamGypLTR3|LTR|Gypsy -9930 NM_001527 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr10-8368 chr10 80614340 80614550 + 6.48 0.000 intron (NM_207372, intron 6 of 6) MSTB|LTR|ERVL-MaLR -35352 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr11-5653 chr11 125021047 125021257 + 6.48 0.000 intron (NM_025004, intron 13 of 15) L2c|LINE|L2 -42153 NM_001145290 219855 Hs.352661 NM_198277 ENSG00000134955 SLC37A2 pp11662 solute carrier family 37 member 2 protein-coding chr15-2078 chr15 62896311 62896521 + 6.48 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 72459 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr11-10202 chr11 96194761 96194971 + 6.48 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -146572 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr10-4837 chr10 13471604 13471814 + 6.48 0.000 intron (NM_001370075, intron 5 of 8) intron (NM_001370075, intron 5 of 8) 31267 NM_152751 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr12-6268 chr12 44979767 44979977 + 6.48 0.000 Intergenic Intergenic -65944 NM_001145110 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr2-10732 chr2 31017980 31018190 + 6.48 0.000 intron (NM_024572, intron 1 of 14) intron (NM_024572, intron 1 of 14) 111555 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr7-8234 chr7 34698306 34698516 + 6.48 0.000 intron (NM_001300934, intron 2 of 6) intron (NM_001300934, intron 2 of 6) 40172 NM_001300934 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr20-1340 chr20 4384199 4384409 + 6.48 0.000 Intergenic L1MEd|LINE|L1 -135017 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr9-6373 chr9 22965745 22965955 + 6.48 0.000 Intergenic MER57A-int|LTR|ERV1 319650 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr2-14207 chr2 208460445 208460655 + 6.48 0.000 intron (NM_005048, intron 9 of 12) intron (NM_005048, intron 9 of 12) 53720 NM_005048 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr3-8758 chr3 2589595 2589805 + 6.48 0.000 intron (NM_175607, intron 4 of 24) MLT1F1|LTR|ERVL-MaLR -302515 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr5-8793 chr5 149374862 149375072 + 6.48 0.000 intron (NM_014443, intron 2 of 2) AluJb|SINE|Alu 4325 NM_014443 27190 Hs.156979 NM_014443 ENSG00000127743 IL17B IL-17B|IL-20|NIRF|ZCYTO7 interleukin 17B protein-coding chr2-14287 chr2 216222694 216222904 + 6.48 0.000 Intergenic Intergenic 5910 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA chr19-6363 chr19 11846407 11846617 + 6.48 0.000 Intergenic LTR26|LTR|ERV1 -2221 NM_001348719 90594 Hs.528731 NM_152262 ENSG00000171291 ZNF439 - zinc finger protein 439 protein-coding chr4-8573 chr4 167917006 167917216 + 6.48 0.000 Intergenic Intergenic -175426 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr19-5857 chr19 44770650 44770860 + 6.48 0.000 Intergenic Intergenic -7114 NM_001130852 23624 Hs.466907 NM_012116 ENSG00000142273 CBLC CBL-3|CBL-SL|RNF57 Cbl proto-oncogene C protein-coding chr7-7183 chr7 8065522 8065732 + 6.48 0.000 intron (NM_138426, intron 5 of 7) L1PA15|LINE|L1 96831 NM_138426 113263 Hs.131673 NM_138426 ENSG00000106415 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced 1 protein-coding chrX-572 chrX 54302853 54303063 + 6.48 0.000 intron (NM_001002838, intron 5 of 22) AluJo|SINE|Alu 55047 NM_020922 65267 Hs.92423 NM_020922 ENSG00000196632 WNK3 PRKWNK3 WNK lysine deficient protein kinase 3 protein-coding chr16-4908 chr16 89270666 89270876 + 6.48 0.000 intron (NM_001256182, intron 13 of 13) intron (NM_001256182, intron 13 of 13) -25357 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr1-11237 chr1 247127778 247127988 + 6.48 0.000 intron (NM_001243740, intron 3 of 3) LTR2|LTR|ERV1 -15466 NM_207401 388759 Hs.456511 NM_207401 C1orf229 - chromosome 1 open reading frame 229 protein-coding chr13-3424 chr13 99885439 99885649 + 6.48 0.000 intron (NR_104592, intron 7 of 9) intron (NR_104592, intron 7 of 9) 71621 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr7-6471 chr7 3627528 3627738 + 6.48 0.000 intron (NM_152744, intron 2 of 44) ERVL-E-int|LTR|ERVL 326381 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr5-6770 chr5 85566914 85567124 + 6.48 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -715425 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr15-4180 chr15 98460770 98460980 + 6.48 0.000 intron (NM_182562, intron 4 of 6) L1PB1|LINE|L1 -39877 NR_146567 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chr21-1835 chr21 41285271 41285481 + 6.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -31425 NM_206964 54097 Hs.473877 NM_058186 ENSG00000183844 FAM3B 2-21|C21orf11|C21orf76|ORF9|PANDER|PRED44 family with sequence similarity 3 member B protein-coding chr1-6479 chr1 21053579 21053789 + 6.48 0.000 intron (NM_003760, intron 1 of 31) SVA_D|Retroposon|SVA 57699 NM_003760 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr10-8441 chr10 86218789 86218999 + 6.48 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 45894 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr17-5408 chr17 34258267 34258477 + 6.48 0.000 Intergenic Intergenic 3087 NM_002982 6347 Hs.303649 NM_002982 ENSG00000108691 CCL2 GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF C-C motif chemokine ligand 2 protein-coding chr15-3308 chr15 78774083 78774293 + 6.48 0.000 exon (NM_014272, exon 13 of 24) exon (NM_014272, exon 13 of 24) 22151 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr4-7932 chr4 108737722 108737932 + 6.48 0.000 Intergenic MER47B|DNA|TcMar-Tigger 25226 NM_001146590 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr16-5494 chr16 10621880 10622090 + 6.48 0.000 Intergenic AluJb|SINE|Alu -41387 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr1-11145 chr1 235598288 235598498 + 6.48 0.000 intron (NM_001098721, intron 1 of 3) AluJo|SINE|Alu 51391 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr17-8150 chr17 59735195 59735405 + 6.48 0.000 intron (NM_001329402, intron 2 of 10) intron (NM_001329402, intron 2 of 10) 27646 NM_001329399 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding chr7-9471 chr7 135023170 135023380 + 6.48 0.000 intron (NR_144293, intron 4 of 10) L1P4a|LINE|L1 36767 NM_001367814 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr1-12917 chr1 116958889 116959099 + 6.48 0.000 intron (NM_020440, intron 4 of 8) intron (NM_020440, intron 4 of 8) -42756 NM_001256111 9398 Hs.654598 NM_004258 ENSG00000134256 CD101 EWI-101|IGSF2|V7 CD101 molecule protein-coding chr7-3184 chr7 101717863 101718073 + 6.48 0.000 Intergenic Intergenic -88672 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr6-6460 chr6 107399851 107400061 + 6.48 0.000 intron (NM_020381, intron 1 of 7) L1M2|LINE|L1 59608 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr18-3449 chr18 67582543 67582753 + 6.48 0.000 intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) -65928 NM_032160 92126 Hs.124673 NM_032160 ENSG00000171451 DSEL C18orf4|DE-epi2 dermatan sulfate epimerase like protein-coding chr1-10822 chr1 203466270 203466480 + 6.48 0.000 Intergenic Intergenic -9431 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr20-2649 chr20 43949704 43949914 + 6.48 0.000 intron (NM_001098798, intron 1 of 7) intron (NM_001098798, intron 1 of 7) 3913 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chrX-4297 chrX 43339284 43339494 + 6.48 0.000 Intergenic THE1C|LTR|ERVL-MaLR 162395 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr8-6561 chr8 69643760 69643970 + 6.48 0.000 intron (NR_132437, intron 16 of 16) intron (NR_132437, intron 16 of 16) 50965 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr9-6558 chr9 119925051 119925261 + 6.48 0.000 Intergenic Intergenic -9904 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr8-3387 chr8 60268338 60268548 + 6.48 0.000 intron (NR_135821, intron 2 of 9) intron (NR_135821, intron 2 of 9) 12957 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr6-8462 chr6 154532310 154532520 + 6.48 0.000 Intergenic AluSx1|SINE|Alu -21730 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr9-6120 chr9 11138417 11138627 + 6.48 0.000 Intergenic Intergenic 525316 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr18-2342 chr18 23662430 23662640 + 6.48 0.000 intron (NM_173505, intron 1 of 9) CpG 376 NM_173505 147463 Hs.355689 NM_173505 ENSG00000154065 ANKRD29 - ankyrin repeat domain 29 protein-coding chr16-4177 chr16 10670060 10670270 + 6.48 0.000 intron (NM_144674, intron 5 of 6) intron (NM_144674, intron 5 of 6) 24765 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr15-2133 chr15 73727348 73727558 + 6.48 0.000 Intergenic MamRTE1|LINE|RTE-BovB 24022 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr9-8128 chr9 100581676 100581886 + 6.48 0.000 intron (NM_001018116, intron 1 of 1) intron (NM_001018116, intron 1 of 1) 3702 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr3-8955 chr3 14886133 14886343 + 6.48 0.000 intron (NM_152536, intron 4 of 19) intron (NM_152536, intron 4 of 19) 61267 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr12-5921 chr12 67662266 67662476 + 6.48 0.000 3' UTR (NM_003583, exon 2 of 2) 3' UTR (NM_003583, exon 2 of 2) 13626 NM_003583 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr13-3726 chr13 40069309 40069519 + 6.48 0.000 Intergenic Intergenic -112395 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA chr16-5682 chr16 72107622 72107832 + 6.48 0.000 exon (NM_014003, exon 21 of 27) exon (NM_014003, exon 21 of 27) -13349 NM_001142318 54957 Hs.134406 NM_017853 ENSG00000140830 TXNL4B DLP|Dim2 thioredoxin like 4B protein-coding chr11-8060 chr11 27697646 27697856 + 6.48 0.000 non-coding (NR_033313, exon 6 of 6) non-coding (NR_033313, exon 6 of 6) 1916 NM_170734 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr6-7157 chr6 36838779 36838989 + 6.48 0.000 intron (NM_020939, intron 1 of 20) intron (NM_020939, intron 1 of 20) 560 NM_001314017 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr5-6754 chr5 80711161 80711371 + 6.48 0.000 intron (NM_002439, intron 8 of 23) intron (NM_002439, intron 8 of 23) -56283 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr15-2474 chr15 89112325 89112535 + 6.48 0.000 intron (NM_007011, intron 5 of 14) intron (NM_007011, intron 5 of 14) 23974 NM_152924 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr8-5573 chr8 83290536 83290746 + 6.48 0.000 Intergenic LTR12E|LTR|ERV1 -113117 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr9-6340 chr9 9699263 9699473 + 6.48 0.000 intron (NM_002839, intron 7 of 45) intron (NM_002839, intron 7 of 45) -100024 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr7-4922 chr7 132004479 132004689 + 6.48 0.000 Intergenic Intergenic 94364 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr14-1578 chr14 77861279 77861489 + 6.48 0.000 intron (NM_001366489, intron 4 of 9) intron (NM_001366489, intron 4 of 9) 61275 NM_001366488 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr4-3653 chr4 25259283 25259493 + 6.48 0.000 intron (NM_018323, intron 5 of 9) intron (NM_018323, intron 5 of 9) 25355 NM_018323 55300 Hs.191701 NM_018323 ENSG00000038210 PI4K2B PI4KIIB|PIK42B phosphatidylinositol 4-kinase type 2 beta protein-coding chr19-3895 chr19 39705847 39706057 + 6.48 0.000 exon (NM_203471, exon 2 of 5) exon (NM_203471, exon 2 of 5) 1471 NM_020129 56891 Hs.24236 NM_020129 ENSG00000006659 LGALS14 CLC2|PPL13 galectin 14 protein-coding chr17-7833 chr17 41555988 41556198 + 6.48 0.000 Intergenic Intergenic -1598 NR_038442 147093 Hs.680576 NR_038442 ENSG00000226629 LINC00974 - long intergenic non-protein coding RNA 974 ncRNA chr2-13943 chr2 184850086 184850296 + 6.48 0.000 intron (NM_194250, intron 1 of 3) L1MA3|LINE|L1 251662 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr10-6229 chr10 60175515 60175725 + 6.48 0.000 intron (NM_001204403, intron 19 of 43) intron (NM_001204403, intron 19 of 43) -34604 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr6-1726 chr6 36820771 36820981 + 6.48 0.000 intron (NM_020939, intron 3 of 20) AluJo|SINE|Alu 18568 NM_001314017 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr9-5038 chr9 29539020 29539230 + 6.48 0.000 Intergenic L2|LINE|L2 -325524 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr20-2439 chr20 24456535 24456745 + 6.48 0.000 Intergenic LTR16A2|LTR|ERVL -12559 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr7-7921 chr7 8101846 8102056 + 6.48 0.000 Intergenic L1PA7|LINE|L1 133155 NM_138426 113263 Hs.131673 NM_138426 ENSG00000106415 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced 1 protein-coding chr11-9078 chr11 30465096 30465306 + 6.48 0.000 intron (NM_001584, intron 3 of 5) intron (NM_001584, intron 3 of 5) 115292 NM_001584 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr5-7020 chr5 158219988 158220198 + 6.48 0.000 Intergenic Intergenic 189680 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr8-5276 chr8 139721334 139721544 + 6.48 0.000 Intergenic L1ME3D|LINE|L1 -18316 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr1-13887 chr1 21722601 21722811 + 6.48 0.000 intron (NM_001350164, intron 11 of 25) AluJb|SINE|Alu -53349 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr7-4503 chr7 157357622 157357832 + 6.48 0.000 intron (NM_005494, intron 1 of 7) intron (NM_005494, intron 1 of 7) 20723 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr13-3307 chr13 52725372 52725582 + 6.48 0.000 intron (NM_007015, intron 3 of 6) intron (NM_007015, intron 3 of 6) 14343 NM_007015 11061 Hs.421391 NM_007015 ENSG00000136110 CNMD BRICD3|CHM-I|CHM1|LECT1|MYETS1 chondromodulin protein-coding chr14-4759 chr14 62517463 62517673 + 6.48 0.000 Intergenic L1PA5|LINE|L1 -377595 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr5-6365 chr5 138677624 138677834 + 6.48 0.000 Intergenic Intergenic 75580 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr10-4244 chr10 132036281 132036491 + 6.48 0.000 Intergenic CpG -29560 NM_001323090 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr4-6466 chr4 145088601 145088811 + 6.48 0.000 intron (NR_046345, intron 1 of 2) L2a|LINE|L2 8676 NM_001318367 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr6-3943 chr6 86540793 86541003 + 6.48 0.000 Intergenic Intergenic -396630 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr5-5062 chr5 93151503 93151713 + 6.48 0.000 Intergenic Intergenic 419735 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr5-7635 chr5 51218041 51218251 + 6.48 0.000 Intergenic L1MA8|LINE|L1 165186 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA chr4-6256 chr4 72868689 72868899 + 6.48 0.000 Intergenic L1PA7|LINE|L1 200922 NM_173827 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding chr22-1585 chr22 48467258 48467468 + 6.48 0.000 Intergenic AluY|SINE|Alu -22190 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr7-6410 chr7 155490753 155490963 + 6.48 0.000 Intergenic Intergenic 19016 NM_001369820 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr12-6650 chr12 795315 795525 + 6.48 0.000 intron (NM_001184985, intron 1 of 27) THE1B|LTR|ERVL-MaLR 42497 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr19-2592 chr19 1684626 1684836 + 6.48 0.000 Intergenic Intergenic -32116 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr12-5367 chr12 119200624 119200834 + 6.48 0.000 Intergenic LTR85b|LTR|Gypsy? 21939 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr9-3344 chr9 104968284 104968494 + 6.48 0.000 Intergenic CpG -40234 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr6-7614 chr6 77503051 77503261 + 6.48 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -39134 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr3-4403 chr3 196926378 196926588 + 6.48 0.000 intron (NM_152699, intron 7 of 9) AluSg|SINE|Alu -13394 NR_046630 100874001 Hs.591671 NR_046630 NCBP2-AS1 - NCBP2 antisense RNA 1 ncRNA chr6-6335 chr6 52170197 52170407 + 6.48 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -16073 NM_002190 3605 Hs.41724 NM_002190 ENSG00000112115 IL17A CTLA-8|CTLA8|IL-17|IL-17A|IL17 interleukin 17A protein-coding chr15-5309 chr15 101807434 101807644 + 6.48 0.000 TTS (NM_001005326) TTS (NM_001005326) 1819 NM_001005326 390648 Hs.553399 NM_001005326 ENSG00000184140 OR4F6 OR15-15|OR4F12 olfactory receptor family 4 subfamily F member 6 protein-coding chr4-7416 chr4 65735329 65735539 + 6.48 0.000 Intergenic Intergenic -64939 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr1-12678 chr1 47419143 47419353 + 6.48 0.000 intron (NR_126355, intron 1 of 4) intron (NR_126355, intron 1 of 4) 2963 NM_012186 2301 Hs.112968 NM_012186 ENSG00000186790 FOXE3 AAT11|ASGD2|CTRCT34|FKHL12|FREAC8 forkhead box E3 protein-coding chrX-4475 chrX 63016232 63016442 + 6.48 0.000 Intergenic L1P3|LINE|L1 334995 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr7-3104 chr7 24779110 24779320 + 6.48 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -21276 NM_004403 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr2-12309 chr2 47156101 47156311 + 6.48 0.000 promoter-TSS (NM_173649) promoter-TSS (NM_173649) -898 NM_001163561 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr8-5203 chr8 110792540 110792750 + 6.48 0.000 Intergenic MER21-int|LTR|ERVL 234788 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr12-6725 chr12 5546811 5547021 + 6.48 0.000 Intergenic Intergenic 52784 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr5-6815 chr5 103301088 103301298 + 6.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 41769 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr7-7176 chr7 6462323 6462533 + 6.48 0.000 3' UTR (NM_006854, exon 5 of 5) 3' UTR (NM_006854, exon 5 of 5) -14416 NM_001142936 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr8-3471 chr8 98211565 98211775 + 6.48 0.000 intron (NR_135747, intron 7 of 11) intron (NR_135747, intron 7 of 11) 82565 NM_024759 79815 Hs.309489 NM_024759 ENSG00000104361 NIPAL2 NPAL2 NIPA like domain containing 2 protein-coding chr2-8514 chr2 129440571 129440781 + 6.48 0.000 Intergenic Intergenic -166785 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr9-8742 chr9 132757602 132757812 + 6.48 0.000 intron (NM_001317959, intron 13 of 14) intron (NM_001317959, intron 13 of 14) 87243 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr3-9515 chr3 51855765 51855975 + 6.48 0.000 Intergenic HERV9-int|LTR|ERV1 -5745 NM_203424 389123 Hs.412294 NM_203424 ENSG00000184345 IQCF2 - IQ motif containing F2 protein-coding chr5-4929 chr5 74268940 74269150 + 6.48 0.000 Intergenic Intergenic 39280 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr1-7255 chr1 228973957 228974167 + 6.48 0.000 Intergenic Intergenic 200739 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-9009 chr7 100902922 100903132 + 6.48 0.000 Intergenic Intergenic -6033 NM_001367919 43 Hs.154495 NM_000665 ENSG00000087085 ACHE ACEE|ARACHE|N-ACHE|YT acetylcholinesterase (Cartwright blood group) protein-coding chr7-7402 chr7 72213900 72214110 + 6.48 0.000 intron (NM_001363460, intron 2 of 5) intron (NM_001363460, intron 2 of 5) 123386 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr10-9135 chr10 127875113 127875323 + 6.48 0.000 Intergenic Intergenic 17723 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chr3-10233 chr3 122716401 122716611 + 6.48 0.000 intron (NM_017554, intron 12 of 16) L2c|LINE|L2 35667 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr19-2559 chr19 51136335 51136545 + 6.48 0.000 TTS (NM_001198558) TTS (NM_001198558) -5861 NM_014385 27036 Hs.655393 NM_014385 ENSG00000168995 SIGLEC7 AIRM1|CD328|CDw328|D-siglec|QA79|SIGLEC-7|SIGLEC19P|SIGLECP2|p75|p75/AIRM1 sialic acid binding Ig like lectin 7 protein-coding KI270714.1-2 KI270714.1 9832 10042 + 6.48 0.000 NA NA NA NA chr19-5763 chr19 20661011 20661221 + 6.48 0.000 intron (NM_001076675, intron 1 of 3) intron (NM_001076675, intron 1 of 3) 455 NM_001076675 199777 Hs.657001 NM_145297 ENSG00000188171 ZNF626 - zinc finger protein 626 protein-coding chr14-2992 chr14 52217754 52217964 + 6.48 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -49839 NM_000953 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr3-8608 chr3 165433886 165434096 + 6.48 0.000 intron (NR_125764, intron 3 of 5) THE1D-int|LTR|ERVL-MaLR 227031 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chrX-3610 chrX 84436814 84437024 + 6.48 0.000 intron (NM_001177478, intron 4 of 9) L1MA5A|LINE|L1 65534 NM_001177479 139324 Hs.559546 NM_144657 ENSG00000165259 HDX CXorf43|D030011N01Rik highly divergent homeobox protein-coding chr7-9670 chr7 152438080 152438290 + 6.48 0.000 intron (NR_002935, intron 1 of 1) Tigger20a|DNA|TcMar-Tigger 1290 NR_002935 220832 Hs.647108 NR_002935 ENSG00000241735 FABP5P3 FABP5L3 fatty acid binding protein 5 pseudogene 3 pseudo chr2-3764 chr2 9206350 9206560 + 6.48 0.000 promoter-TSS (NM_001135191) promoter-TSS (NM_001135191) -310 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr3-10741 chr3 155670613 155670823 + 6.48 0.000 intron (NM_001349252, intron 2 of 24) intron (NM_001349252, intron 2 of 24) 5625 NM_001130960 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr13-2949 chr13 44585529 44585739 + 6.48 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -9069 NM_001243799 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chr10-7978 chr10 59279670 59279880 + 6.48 0.000 intron (NM_001347852, intron 6 of 12) intron (NM_001347852, intron 6 of 12) 82774 NM_198215 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chrX-2446 chrX 81201169 81201379 + 6.48 0.000 promoter-TSS (NM_003022) promoter-TSS (NM_003022) 639 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr10-6621 chr10 97108951 97109161 + 6.48 0.000 intron (NM_003061, intron 4 of 36) MIR|SINE|MIR 6300 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr6-4092 chr6 146868718 146868928 + 6.48 0.000 intron (NR_034115, intron 7 of 10) intron (NR_034115, intron 7 of 10) -64999 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr9-7575 chr9 35870057 35870267 + 6.48 0.000 exon (NM_001004487, exon 1 of 1) exon (NM_001004487, exon 1 of 1) 239 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chr3-10930 chr3 174014973 174015183 + 6.48 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -94282 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chrX-3895 chrX 7400756 7400966 + 6.48 0.000 Intergenic Intergenic 148388 NM_001320754 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr2-13483 chr2 147595681 147595891 + 6.48 0.000 Intergenic Intergenic -248731 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr3-9866 chr3 80855363 80855573 + 6.48 0.000 Intergenic L1MC2|LINE|L1 84764 NR_147145 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr7-8512 chr7 54125070 54125280 + 6.48 0.000 Intergenic HERVL-int|LTR|ERVL -205522 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr13-2611 chr13 75581971 75582181 + 6.48 0.000 intron (NM_006002, intron 6 of 8) MIRc|SINE|MIR 32326 NM_006002 7347 Hs.162241 NM_006002 ENSG00000118939 UCHL3 UCH-L3 ubiquitin C-terminal hydrolase L3 protein-coding chr11-6700 chr11 78204581 78204791 + 6.48 0.000 intron (NM_020798, intron 6 of 10) intron (NM_020798, intron 6 of 10) 15767 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr2-12196 chr2 41782494 41782704 + 6.48 0.000 Intergenic PABL_B-int|LTR|ERV1 -94956 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr8-4954 chr8 118606706 118606916 + 6.48 0.000 intron (NR_109794, intron 1 of 4) intron (NR_109794, intron 1 of 4) -14190 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr16-4672 chr16 77833984 77834194 + 6.48 0.000 intron (NM_020927, intron 3 of 8) intron (NM_020927, intron 3 of 8) 45525 NM_020927 57687 Hs.461405 NM_020927 ENSG00000171724 VAT1L - vesicle amine transport 1 like protein-coding chr3-5908 chr3 40713840 40714050 + 6.48 0.000 Intergenic L2a|LINE|L2 188985 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr16-6696 chr16 70598854 70599064 + 6.48 0.000 intron (NM_152456, intron 1 of 6) LTR64|LTR|ERV1 19060 NM_001172771 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr22-3412 chr22 37157165 37157375 + 6.48 0.000 intron (NM_001346222, intron 1 of 9) intron (NM_001346222, intron 1 of 9) -7354 NM_000878 3560 Hs.474787 NM_000878 ENSG00000100385 IL2RB CD122|IL15RB|P70-75 interleukin 2 receptor subunit beta protein-coding chr13-3608 chr13 29199130 29199340 + 6.48 0.000 intron (NM_001033602, intron 3 of 13) L1PA8|LINE|L1 174778 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr3-3959 chr3 52162530 52162740 + 6.48 0.000 Intergenic MER52C|LTR|ERV1 -8212 NM_015426 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr6-8166 chr6 132028148 132028358 + 6.48 0.000 Intergenic Intergenic -76881 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr6-4717 chr6 62560490 62560700 + 6.48 0.000 Intergenic LTR50|LTR|ERVL -274368 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr19-4526 chr19 8062795 8063005 + 6.48 0.000 TTS (NM_001201359) TTS (NM_001201359) 10138 NM_005624 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr8-6140 chr8 30218388 30218598 + 6.48 0.000 Intergenic THE1B|LTR|ERVL-MaLR 62124 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr8-4729 chr8 142095592 142095802 + 6.48 0.000 Intergenic Intergenic -80642 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr2-4317 chr2 237268182 237268392 + 6.48 0.000 Intergenic Intergenic 145877 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr14-3748 chr14 40458203 40458413 + 6.48 0.000 Intergenic Intergenic -496403 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr12-3511 chr12 125463569 125463779 + 6.48 0.000 intron (NM_052907, intron 3 of 8) intron (NM_052907, intron 3 of 8) 137058 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr17-6437 chr17 8038986 8039196 + 6.48 0.000 promoter-TSS (NM_001141) promoter-TSS (NM_001141) 32 NM_001039131 247 Hs.111256 NM_001141 ENSG00000179593 ALOX15B 15-LOX-2 arachidonate 15-lipoxygenase type B protein-coding chrX-4833 chrX 103034952 103035162 + 6.48 0.000 Intergenic L1MA4|LINE|L1 29114 NM_018476 55859 Hs.334370 NM_018476 ENSG00000133169 BEX1 BEX2|HBEX2|HGR74-h brain expressed X-linked 1 protein-coding chr17-8272 chr17 67562932 67563142 + 6.48 0.000 intron (NM_181671, intron 4 of 9) intron (NM_181671, intron 4 of 9) -91452 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr7-7822 chr7 3236687 3236897 + 6.48 0.000 Intergenic Intergenic -64460 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr13-2830 chr13 107271355 107271565 + 6.48 0.000 intron (NM_001080396, intron 1 of 2) MLT1E3|LTR|ERVL-MaLR 49503 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chrX-4987 chrX 117554649 117554859 + 6.48 0.000 Intergenic L1PA7|LINE|L1 418984 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr9-3033 chr9 128026965 128027175 + 6.48 0.000 Intergenic Intergenic 40250 NM_197956 203245 Hs.373606 NM_197956 ENSG00000171169 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding chr9-7469 chr9 28160779 28160989 + 6.48 0.000 intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) 558421 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr2-9748 chr2 79280767 79280977 + 6.48 0.000 Intergenic LTR16A2|LTR|ERVL -121119 NM_138937 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding chr16-5490 chr16 8779911 8780121 + 6.48 0.000 intron (NM_020686, intron 15 of 15) L2c|LINE|L2 17623 NM_015421 25880 Hs.513330 NM_015421 ENSG00000184857 TMEM186 C16orf51 transmembrane protein 186 protein-coding chr10-6069 chr10 129759992 129760202 + 6.48 0.000 intron (NM_002412, intron 4 of 4) intron (NM_002412, intron 4 of 4) 83277 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr14-3159 chr14 69325587 69325797 + 6.48 0.000 intron (NM_020692, intron 4 of 15) intron (NM_020692, intron 4 of 15) 65534 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr12-7346 chr12 56024803 56025013 + 6.48 0.000 intron (NM_001351089, intron 6 of 11) intron (NM_001351089, intron 6 of 11) 183 NR_135023 105369781 Hs.670395 NR_135023 LOC105369781 - uncharacterized LOC105369781 ncRNA chr9-7956 chr9 91395284 91395494 + 6.48 0.000 Intergenic L2c|LINE|L2 28443 NM_005384 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr15-2182 chr15 85027110 85027320 + 6.48 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 45241 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr2-13080 chr2 111026058 111026268 + 6.48 0.000 intron (NM_001371254, intron 15 of 18) L1ME1|LINE|L1 89425 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr12-7938 chr12 109029802 109030012 + 6.48 0.000 intron (NM_001301175, intron 3 of 15) intron (NM_001301175, intron 3 of 15) 6818 NM_001301175 84749 Hs.486434 NM_032663 ENSG00000135093 USP30 - ubiquitin specific peptidase 30 protein-coding chr1-14518 chr1 51061353 51061563 + 6.48 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 1440 NR_106754 102466656 NR_106754 ENSG00000275816 MIR6500 hsa-mir-6500 microRNA 6500 ncRNA chrY-3 chrY 1366575 1366785 + 6.48 0.000 intron (NM_002183, intron 9 of 11).2 CpG 25433 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chr14-1967 chr14 36647292 36647502 + 6.48 0.000 Intergenic CpG -10171 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr21-1862 chr21 42299468 42299678 + 6.48 0.000 Intergenic Intergenic 16023 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr14-3953 chr14 20899412 20899622 + 6.48 0.000 Intergenic AluSq2|SINE|Alu 8114 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding chr22-2516 chr22 23673118 23673328 + 6.48 0.000 intron (NR_024448, intron 10 of 11) intron (NR_024448, intron 10 of 11) -17638 NM_001329424 266747 Hs.658997 NM_153615 ENSG00000159496 RGL4 Rgr ral guanine nucleotide dissociation stimulator like 4 protein-coding chr1-10772 chr1 201178946 201179156 + 6.48 0.000 Intergenic Intergenic -7469 NM_001288564 252839 Hs.181444 NM_016456 ENSG00000116857 TMEM9 DERM4|TMEM9A transmembrane protein 9 protein-coding chr15-3247 chr15 75258687 75258897 + 6.48 0.000 intron (NM_001164404, intron 1 of 17) intron (NM_001164404, intron 1 of 17) 234 NM_001164404 653641 Hs.540230 NM_001164404 ENSG00000167195 GOLGA6C - golgin A6 family member C protein-coding chr5-7448 chr5 31694341 31694551 + 6.48 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 55315 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr8-5257 chr8 133112562 133112772 + 6.48 0.000 intron (NM_003235, intron 43 of 47) intron (NM_003235, intron 43 of 47) -10065 NM_001045556 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr3-10374 chr3 128709008 128709218 + 6.48 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -17023 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr10-5248 chr10 66783380 66783590 + 6.48 0.000 intron (NM_001127384, intron 7 of 17) intron (NM_001127384, intron 7 of 17) -142551 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr7-2950 chr7 151274626 151274836 + 6.48 0.000 intron (NM_003078, intron 2 of 13) intron (NM_003078, intron 2 of 13) 2003 NM_001003802 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr2-7297 chr2 238925068 238925278 + 6.48 0.000 non-coding (NR_034162, exon 3 of 10) non-coding (NR_034162, exon 3 of 10) 1096 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr12-4790 chr12 54101882 54102092 + 6.48 0.000 promoter-TSS (NR_026657) promoter-TSS (NR_026657) -222 NR_026657 100240734 Hs.634954 NR_026657 LOC100240734 - uncharacterized LOC100240734 ncRNA chr1-12087 chr1 154895126 154895336 + 6.48 0.000 Intergenic Intergenic -24950 NM_002249 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr18-1026 chr18 75398828 75399038 + 6.48 0.000 Intergenic L1MC4|LINE|L1 28770 NM_001303482 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr8-6795 chr8 95362186 95362396 + 6.48 0.000 intron (NR_038209, intron 2 of 3) intron (NR_038209, intron 2 of 3) -93090 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr7-6497 chr7 10953422 10953632 + 6.48 0.000 Intergenic L1PB4|LINE|L1 -13374 NM_002489 4697 Hs.50098 NM_002489 ENSG00000189043 NDUFA4 CI-9k|CI-MLRQ|COXFA4|MLRQ NDUFA4 mitochondrial complex associated protein-coding chr5-6112 chr5 26485338 26485548 + 6.48 0.000 Intergenic LTR12C|LTR|ERV1 553143 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr14-4029 chr14 50745617 50745827 + 6.48 0.000 intron (NM_016350, intron 21 of 28) intron (NM_016350, intron 21 of 28) -76075 NR_135258 105370489 Hs.569387 NR_135258 ENSG00000258843 LOC105370489 - uncharacterized LOC105370489 ncRNA chr11-10087 chr11 85806149 85806359 + 6.48 0.000 intron (NM_001365826, intron 1 of 18) intron (NM_001365826, intron 1 of 18) 4887 NM_206928 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr8-5349 chr8 17448249 17448459 + 6.48 0.000 Intergenic FRAM|SINE|Alu -35003 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr3-8363 chr3 82045006 82045216 + 6.48 0.000 intron (NR_147146, intron 1 of 8) OldhAT1|DNA|hAT-Ac 58969 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr17-8681 chr17 82511865 82512075 + 6.48 0.000 Intergenic AluSc|SINE|Alu -7762 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr9-5519 chr9 107215023 107215233 + 6.48 0.000 Intergenic LTR104_Mam|LTR|Gypsy -68151 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr14-1257 chr14 20506370 20506580 + 6.48 0.000 Intergenic SVA_E|Retroposon|SVA -3997 NM_001012975 338879 Hs.451057 NM_001012975 ENSG00000182545 RNASE10 RAH1|RNASE9 ribonuclease A family member 10 (inactive) protein-coding chr16-3857 chr16 68340828 68341038 + 6.48 0.000 intron (NR_147058, intron 9 of 18) L1ME4b|LINE|L1 29819 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr3-6894 chr3 156069259 156069469 + 6.48 0.000 Intergenic L1PA7|LINE|L1 -51184 NM_001308217 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr14-5126 chr14 89908953 89909163 + 6.48 0.000 intron (NM_001284269, intron 5 of 5) intron (NM_001284269, intron 5 of 5) 45478 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chrX-2701 chrX 119921046 119921256 + 6.48 0.000 TTS (NM_178813) TTS (NM_178813) 22600 NM_024528 79576 Hs.522771 NM_024528 ENSG00000101882 NKAP - NFKB activating protein protein-coding chr9-6897 chr9 89881220 89881430 + 6.48 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -88091 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr4-5207 chr4 164552039 164552249 + 6.48 0.000 Intergenic LTR1D|LTR|ERV1 -168889 NM_001166373 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr7-4691 chr7 43261388 43261598 + 6.48 0.000 intron (NM_001287059, intron 2 of 27) intron (NM_001287059, intron 2 of 27) 110598 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr3-4480 chr3 52140272 52140482 + 6.48 0.000 intron (NM_015426, intron 6 of 10) intron (NM_015426, intron 6 of 10) 14046 NM_001161580 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr16-5553 chr16 30341870 30342080 + 6.48 0.000 Intergenic Intergenic -6601 NR_002453 595101 Hs.654650 NR_002453 ENSG00000183604 SMG1P5 - SMG1 pseudogene 5 pseudo chr1-8869 chr1 3978092 3978302 + 6.48 0.000 Intergenic Intergenic -29217 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr1-12862 chr1 102810968 102811178 + 6.48 0.000 Intergenic THE1B|LTR|ERVL-MaLR 297423 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr8-1637 chr8 103298772 103298982 + 6.48 0.000 promoter-TSS (NR_133921) promoter-TSS (NR_133921) -21 NM_001317796 8323 Hs.591863 NM_003506 ENSG00000164930 FZD6 FZ-6|FZ6|HFZ6|NDNC10 frizzled class receptor 6 protein-coding chr2-13111 chr2 113390390 113390600 + 6.48 0.000 Intergenic Intergenic -47196 NM_001330342 150472 Hs.531330 NM_172003 ENSG00000136682 CBWD2 - COBW domain containing 2 protein-coding chr1-5779 chr1 160501679 160501889 + 6.48 0.000 intron (NM_001184714, intron 1 of 7) L2b|LINE|L2 21471 NM_052931 114836 Hs.492348 NM_052931 ENSG00000162739 SLAMF6 CD352|KALI|KALIb|Ly108|NTB-A|NTBA|SF2000 SLAM family member 6 protein-coding chr3-6580 chr3 124206158 124206368 + 6.48 0.000 intron (NM_001024660, intron 1 of 59) MLT1J2|LTR|ERVL-MaLR 73334 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr11-7705 chr11 69274272 69274482 + 6.48 0.000 Intergenic Intergenic -19778 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr2-12019 chr2 28537811 28538021 + 6.48 0.000 intron (NM_153021, intron 9 of 57) intron (NM_153021, intron 9 of 57) -28441 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr11-7618 chr11 47362450 47362660 + 6.48 0.000 intron (NM_001080547, intron 2 of 4) AluJr|SINE|Alu -9853 NM_000256 4607 Hs.524906 NM_000256 ENSG00000134571 MYBPC3 CMD1MM|CMH4|FHC|LVNC10|MYBP-C myosin binding protein C, cardiac protein-coding chr8-4947 chr8 112335644 112335854 + 6.48 0.000 intron (NM_001363185, intron 40 of 66) (T)n|Simple_repeat|Simple_repeat -307744 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr4-8228 chr4 138475772 138475982 + 6.48 0.000 Intergenic Intergenic 166166 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr5-8104 chr5 97407224 97407434 + 6.48 0.000 Intergenic LTR12C|LTR|ERV1 -97367 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr7-7175 chr7 6395839 6396049 + 6.48 0.000 intron (NM_006908, intron 3 of 5) intron (NM_006908, intron 3 of 5) 21417 NM_006908 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|MRD48|Rac-1|TC-25|p21-Rac1 Rac family small GTPase 1 protein-coding chr4-4427 chr4 49029278 49029488 + 6.48 0.000 intron (NM_001286791, intron 10 of 15) LTR5B|LTR|ERVK 42741 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr3-8057 chr3 5716513 5716723 + 6.48 0.000 Intergenic L1PA11|LINE|L1 -466363 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr16-6739 chr16 74736065 74736275 + 6.48 0.000 intron (NM_024306, intron 2 of 6) intron (NM_024306, intron 2 of 6) -35308 NM_001142497 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr7-7229 chr7 23232678 23232888 + 6.48 0.000 Intergenic Intergenic -13992 NM_002510 10457 Hs.190495 NM_002510 ENSG00000136235 GPNMB HGFIN|NMB|PLCA3 glycoprotein nmb protein-coding chr17-5292 chr17 21498569 21498779 + 6.48 0.000 Intergenic MER72B|LTR|ERV1 53004 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr15-5170 chr15 92586887 92587097 + 6.48 0.000 Intergenic (CCTCTG)n|Simple_repeat|Simple_repeat -14729 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 - long intergenic non-protein coding RNA 930 ncRNA chr18-3409 chr18 62616793 62617003 + 6.48 0.000 Intergenic Intergenic 93873 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr8-6132 chr8 29365943 29366153 + 6.48 0.000 Intergenic Intergenic -15364 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr3-3657 chr3 128493228 128493438 + 6.48 0.000 promoter-TSS (NM_032638) promoter-TSS (NM_032638) -146 NM_032638 2624 Hs.367725 NM_032638 ENSG00000179348 GATA2 DCML|IMD21|MONOMAC|NFE1B GATA binding protein 2 protein-coding chr15-3738 chr15 58333246 58333456 + 6.48 0.000 Intergenic L3|LINE|CR1 -98640 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr15-3404 chr15 89456419 89456629 + 6.48 0.000 Intergenic Intergenic 40059 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr1-8013 chr1 223684344 223684554 + 6.48 0.000 Intergenic Intergenic -17144 NM_001146068 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chrX-4307 chrX 44006004 44006214 + 6.48 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -32719 NM_000266 4693 Hs.522615 NM_000266 ENSG00000124479 NDP EVR2|FEVR|ND norrin cystine knot growth factor NDP protein-coding chr1-14045 chr1 27683702 27683912 + 6.48 0.000 Intergenic AluSx1|SINE|Alu -11615 NM_022872 2537 Hs.523847 NM_002038 ENSG00000126709 IFI6 6-16|FAM14C|G1P3|IFI-6-16|IFI616 interferon alpha inducible protein 6 protein-coding chr9-8186 chr9 107148256 107148466 + 6.48 0.000 Intergenic L2c|LINE|L2 -45373 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr1-11999 chr1 92211203 92211413 + 6.48 0.000 Intergenic Intergenic -6607 NM_001012425 388649 Hs.558823 NM_001012425 ENSG00000203910 C1orf146 - chromosome 1 open reading frame 146 protein-coding chr11-9883 chr11 74406869 74407079 + 6.48 0.000 Intergenic MER58A|DNA|hAT-Charlie 7737 NR_039710 100616215 NR_039710 ENSG00000264402 MIR548AL - microRNA 548al ncRNA chr12-2147 chr12 109838025 109838235 + 6.48 0.000 Intergenic L1MB7|LINE|L1 -4723 NM_021625 59341 Hs.506713 NM_021625 ENSG00000111199 TRPV4 BCYM3|CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel subfamily V member 4 protein-coding chr10-5679 chr10 99457648 99457858 + 6.48 0.000 Intergenic Intergenic -27129 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr3-7891 chr3 129577269 129577479 + 6.48 0.000 intron (NM_015103, intron 9 of 35) intron (NM_015103, intron 9 of 35) 28989 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr2-12263 chr2 45124923 45125133 + 6.48 0.000 Intergenic MIR3|SINE|MIR -115576 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr2-3655 chr2 164338764 164338974 + 6.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 229626 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr10-7889 chr10 49387185 49387395 + 6.48 0.000 intron (NM_001276451, intron 4 of 6) intron (NM_001276451, intron 4 of 6) 8799 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding chr7-5296 chr7 24700504 24700714 + 6.48 0.000 intron (NM_004403, intron 9 of 9) MARNA|DNA|TcMar-Mariner 56855 NM_001127453 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr6-6295 chr6 40468543 40468753 + 6.48 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 90311 NR_160958 732253 Hs.180197 NM_001359094 TDRG1 LINC00532|lincRNA-NR_024015 testis development related 1 ncRNA chr20-2037 chr20 1109373 1109583 + 6.48 0.000 Intergenic LTR33B|LTR|ERVL -3751 NM_178578 9491 Hs.471917 NM_006814 ENSG00000125818 PSMF1 PI31 proteasome inhibitor subunit 1 protein-coding chr6-2606 chr6 124291620 124291830 + 6.48 0.000 intron (NM_001040214, intron 2 of 6) LTR48|LTR|ERV1 8720 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr1-9474 chr1 36262771 36262981 + 6.48 0.000 intron (NM_001321471, intron 3 of 12) AluY|SINE|Alu 38433 NM_001321471 9967 Hs.744057 NM_005119 ENSG00000054118 THRAP3 BCLAF2|TRAP150 thyroid hormone receptor associated protein 3 protein-coding chr1-8309 chr1 45679264 45679474 + 6.48 0.000 intron (NM_021639, intron 2 of 12) MLT1N2|LTR|ERVL-MaLR 7164 NM_021639 60313 Hs.238432 NM_021639 ENSG00000159592 GPBP1L1 SP192 GC-rich promoter binding protein 1 like 1 protein-coding chr10-9256 chr10 133540578 133540788 + 6.48 0.000 Intergenic Intergenic 13320 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr7-9131 chr7 108347630 108347840 + 6.48 0.000 intron (NM_001371131, intron 2 of 33) intron (NM_001371131, intron 2 of 33) -19209 NM_001371178 chr15-3801 chr15 71781258 71781468 + 6.48 0.000 3' UTR (NM_024817, exon 17 of 17) 3' UTR (NM_024817, exon 17 of 17) -29191 NM_016346 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding chr15-2281 chr15 58440700 58440910 + 6.48 0.000 intron (NR_120338, intron 2 of 2) L2c|LINE|L2 8814 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr3-8110 chr3 18264470 18264680 + 6.48 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 160764 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr9-7023 chr9 119287580 119287790 + 6.48 0.000 intron (NM_014618, intron 2 of 7) intron (NM_014618, intron 2 of 7) 81750 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr6-7757 chr6 93463793 93464003 + 6.48 0.000 Intergenic THE1B|LTR|ERVL-MaLR -44316 NM_001288630 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr11-7579 chr11 33498161 33498371 + 6.48 0.000 intron (NM_012194, intron 1 of 20) intron (NM_012194, intron 1 of 20) 122158 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr6-4283 chr6 12897345 12897555 + 6.48 0.000 intron (NM_001322308, intron 3 of 13) intron (NM_001322308, intron 3 of 13) -59906 NM_001322311 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr21-582 chr21 29904500 29904710 + 6.48 0.000 intron (NM_000830, intron 1 of 16) intron (NM_000830, intron 1 of 16) 35391 NM_001330994 2897 Hs.664641 NM_000830 ENSG00000171189 GRIK1 EAA3|EEA3|GLR5|GLUR5|GluK1|gluR-5 glutamate ionotropic receptor kainate type subunit 1 protein-coding chr10-6945 chr10 62618901 62619111 + 6.48 0.000 intron (NM_199452, intron 1 of 6) intron (NM_199452, intron 1 of 6) 98558 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr7-3935 chr7 129074118 129074328 + 6.48 0.000 Intergenic LTR105_Mam|LTR|ERVL 19000 NR_002187 286016 Hs.369665 NR_002187 ENSG00000230359 TPI1P2 - triosephosphate isomerase 1 pseudogene 2 pseudo chr22-2347 chr22 42674109 42674319 + 6.48 0.000 Intergenic Intergenic -24822 NM_000398 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr6-5998 chr6 99964721 99964931 + 6.48 0.000 intron (NM_032503, intron 1 of 5) L1ME3B|LINE|L1 -29212 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr21-1206 chr21 44462042 44462252 + 6.48 0.000 TTS (NM_030891) TTS (NM_030891) 6637 NM_030891 81543 Hs.326579 NM_030891 ENSG00000160233 LRRC3 C21orf102|C21orf30|LRRC3DN leucine rich repeat containing 3 protein-coding chr8-7183 chr8 124251409 124251619 + 6.48 0.000 Intergenic Intergenic -4116 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chrX-5207 chrX 134774397 134774607 + 6.48 0.000 intron (NM_001331089, intron 9 of 9) intron (NM_001331089, intron 9 of 9) -10180 NM_001316887 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr6-6675 chr6 165102677 165102887 + 6.48 0.000 Intergenic LTR27D|LTR|ERV1 206823 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr6-7652 chr6 82095377 82095587 + 6.48 0.000 intron (NR_149135, intron 1 of 3) THE1C|LTR|ERVL-MaLR 6283 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr14-4305 chr14 21202020 21202230 + 6.48 0.000 non-coding (NR_038970, exon 1 of 1) non-coding (NR_038970, exon 1 of 1) 3378 NR_038970 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA chr10-8734 chr10 103503388 103503598 + 6.48 0.000 intron (NR_120675, intron 2 of 3) intron (NR_120675, intron 2 of 3) 9788 NM_004210 9148 Hs.594708 NM_004210 ENSG00000107954 NEURL1 NEUR1|NEURL|RNF67|bA416N2.1|neu|neu-1 neuralized E3 ubiquitin protein ligase 1 protein-coding chr2-14104 chr2 200820801 200821011 + 6.48 0.000 intron (NM_001207067, intron 10 of 11) intron (NM_001207067, intron 10 of 11) 8520 NM_001207068 9689 Hs.355983 NM_014670 ENSG00000082153 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding chr5-7826 chr5 67045989 67046199 + 6.48 0.000 intron (NM_001297651, intron 1 of 25) Tigger3a|DNA|TcMar-Tigger 41439 NM_001290227 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr2-10137 chr2 72000472 72000682 + 6.48 0.000 Intergenic L2b|LINE|L2 147285 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr2-14112 chr2 201007925 201008135 + 6.48 0.000 intron (NM_001321619, intron 7 of 11) MER77B|LTR|ERVL -44370 NR_033915 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr1-16206 chr1 208175304 208175514 + 6.48 0.000 intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 68975 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr20-2013 chr20 57507036 57507246 + 6.48 0.000 3' UTR (NM_001269050, exon 9 of 9) 3' UTR (NM_001269050, exon 9 of 9) 17726 NR_072975 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr1-15332 chr1 119675542 119675752 + 6.48 0.000 Intergenic Intergenic -27381 NM_001080470 90874 Hs.381105 NM_001080470 ENSG00000143067 ZNF697 - zinc finger protein 697 protein-coding chr1-6754 chr1 68479519 68479729 + 6.48 0.000 intron (NM_001114120, intron 9 of 11) AluJr|SINE|Alu -17052 NR_110671 101927220 Hs.382856 NR_110671 ENSG00000234264 DEPDC1-AS1 - DEPDC1 antisense RNA 1 ncRNA chr8-6148 chr8 30689126 30689336 + 6.48 0.000 exon (NM_001195102, exon 8 of 12) exon (NM_001195102, exon 8 of 12) -30995 NM_002095 2961 Hs.77100 NM_002095 ENSG00000197265 GTF2E2 FE|TF2E2|TFIIE-B|TTD6 general transcription factor IIE subunit 2 protein-coding chr12-7868 chr12 105212599 105212809 + 6.48 0.000 intron (NM_001251904, intron 4 of 20) intron (NM_001251904, intron 4 of 20) 20701 NM_001251905 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr10-8309 chr10 78197123 78197333 + 6.48 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -51397 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA chr12-7541 chr12 70652244 70652454 + 6.48 0.000 intron (NR_073474, intron 9 of 10) intron (NR_073474, intron 9 of 10) -14920 NM_001330204 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase receptor type B protein-coding chr1-16105 chr1 203985321 203985531 + 6.48 0.000 Intergenic Intergenic 55838 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr5-5267 chr5 121660157 121660367 + 6.48 0.000 Intergenic L1PA6|LINE|L1 -191620 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr1-6215 chr1 212485879 212486089 + 6.48 0.000 Intergenic Intergenic 53064 NR_026598 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chrX-4055 chrX 18934085 18934295 + 6.48 0.000 intron (NM_000292, intron 11 of 32) intron (NM_000292, intron 11 of 32) 43894 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr9-6049 chr9 136596436 136596646 + 6.48 0.000 Intergenic Intergenic 20640 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr22-3804 chr22 30263958 30264168 + 6.48 0.000 exon (NM_020530, exon 3 of 3) exon (NM_020530, exon 3 of 3) 2177 NM_001319108 5008 Hs.248156 NM_020530 ENSG00000099985 OSM - oncostatin M protein-coding chr5-2451 chr5 134466466 134466676 + 6.48 0.000 Intergenic Intergenic -31524 NR_105044 102546229 NR_105044 LOC102546229 - uncharacterized LOC102546229 ncRNA chr4-6409 chr4 124203887 124204097 + 6.48 0.000 Intergenic Intergenic 354442 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr8-3565 chr8 129361263 129361473 + 6.48 0.000 intron (NR_130920, intron 3 of 3) intron (NR_130920, intron 3 of 3) -120128 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA chr6-6404 chr6 83588729 83588939 + 6.48 0.000 intron (NM_001242794, intron 12 of 19) intron (NM_001242794, intron 12 of 19) 76300 NM_001170423 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr9-7792 chr9 79694043 79694253 + 6.48 0.000 intron (NR_104239, intron 9 of 20) intron (NR_104239, intron 9 of 20) 120971 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr8-2666 chr8 82379935 82380145 + 6.48 0.000 Intergenic Intergenic -532064 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr4-7226 chr4 43234762 43234972 + 6.48 0.000 Intergenic Intergenic 257676 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr14-4136 chr14 73796891 73797101 + 6.48 0.000 intron (NR_109995, intron 2 of 2) intron (NR_109995, intron 2 of 2) 9636 NR_109995 100506476 Hs.287299 NR_109995 LOC100506476 - uncharacterized LOC100506476 ncRNA chr2-13414 chr2 141660820 141661030 + 6.48 0.000 intron (NM_018557, intron 2 of 90) L1PA10|LINE|L1 470776 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr7-4039 chr7 158529449 158529659 + 6.48 0.000 intron (NM_130843, intron 1 of 21) intron (NM_130843, intron 1 of 21) 3259 NR_030325 693180 NR_030325 ENSG00000207637 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA chr8-2496 chr8 2853071 2853281 + 6.48 0.000 Intergenic L1MC3|LINE|L1 -124725 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr2-5469 chr2 128280574 128280784 + 6.48 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 38189 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr16-7119 chr16 89750887 89751097 + 6.48 0.000 intron (NM_000135, intron 31 of 42) AluSz|SINE|Alu 29455 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr9-4152 chr9 137771148 137771358 + 6.48 0.000 intron (NM_001354263, intron 10 of 26) AluSx1|SINE|Alu 17153 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr3-8336 chr3 72069175 72069385 + 6.48 0.000 intron (NR_104116, intron 2 of 6) intron (NR_104116, intron 2 of 6) 31175 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr16-2644 chr16 27268660 27268870 + 6.48 0.000 promoter-TSS (NM_145080) promoter-TSS (NM_145080) 7 NM_145080 197370 Hs.284295 NM_145080 ENSG00000169189 NSMCE1 NSE1 NSE1 homolog, SMC5-SMC6 complex component protein-coding chr20-2784 chr20 54474480 54474690 + 6.48 0.000 Intergenic MIR|SINE|MIR -1008 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr3-9248 chr3 38904752 38904962 + 6.48 0.000 intron (NM_014139, intron 11 of 25) intron (NM_014139, intron 11 of 25) 45704 NM_014139 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chrX-4394 chrX 51813922 51814132 + 6.48 0.000 intron (NM_001005332, intron 1 of 12) LTR52-int|LTR|ERVL 10951 NM_001005332 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr11-8373 chr11 85458963 85459173 + 6.48 0.000 intron (NM_001142699, intron 3 of 27) L1PA15|LINE|L1 168202 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr15-2708 chr15 89226701 89226911 + 6.48 0.000 Intergenic Intergenic -5227 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chr4-5988 chr4 184683236 184683446 + 6.48 0.000 intron (NM_001345898, intron 8 of 12) AluSq2|SINE|Alu 33603 NR_144312 201973 Hs.481307 NM_152683 ENSG00000164306 PRIMPOL CCDC111|MYP22|Primpol1 primase and DNA directed polymerase protein-coding chr1-6348 chr1 6440357 6440567 + 6.48 0.000 intron (NM_031475, intron 3 of 12) CpG-341 -10566 NR_036218 100422975 NR_036218 ENSG00000265392 MIR4252 - microRNA 4252 ncRNA chr6-6981 chr6 18923490 18923700 + 6.48 0.000 Intergenic L1MA3|LINE|L1 256885 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr5-5373 chr5 133530640 133530850 + 6.48 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) 81796 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr17-8151 chr17 59808029 59808239 + 6.48 0.000 intron (NM_001329400, intron 5 of 9) MIRc|SINE|MIR -33132 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr11-5490 chr11 79297388 79297598 + 6.48 0.000 5' UTR (NM_001098816, exon 2 of 34) 5' UTR (NM_001098816, exon 2 of 34) 104616 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr13-3987 chr13 65383782 65383992 + 6.48 0.000 Intergenic L1PA15|LINE|L1 -482160 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr12-3746 chr12 40809850 40810060 + 6.48 0.000 intron (NM_001256063, intron 1 of 15) L1ME3A|LINE|L1 -17983 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr13-3114 chr13 69357845 69358055 + 6.48 0.000 Intergenic L1PB3|LINE|L1 135604 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr12-6684 chr12 3292532 3292742 + 6.48 0.000 Intergenic Intergenic 73485 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr12-6869 chr12 19045650 19045860 + 6.48 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -83978 NM_001143821 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr10-6842 chr10 23556950 23557160 + 6.48 0.000 Intergenic LTR88c|LTR|Gypsy? 117786 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr1-12480 chr1 18854157 18854367 + 6.48 0.000 exon (NM_152232, exon 3 of 6) exon (NM_152232, exon 3 of 6) 5399 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr19-6463 chr19 17043430 17043640 + 6.48 0.000 Intergenic AluJr|SINE|Alu -16725 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr2-12047 chr2 30176276 30176486 + 6.48 0.000 Intergenic MER63A|DNA|hAT-Blackjack -11053 NR_145719 109616960 NR_145719 ENSG00000207187 SNORA10B - small nucleolar RNA, H/ACA box 10B snoRNA chr1-12606 chr1 36086404 36086614 + 6.48 0.000 intron (NM_014466, intron 4 of 9) intron (NM_014466, intron 4 of 9) -2383 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr5-6812 chr5 101981668 101981878 + 6.48 0.000 Intergenic L2a|LINE|L2 314511 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr6-8345 chr6 147758675 147758885 + 6.48 0.000 Intergenic L2|LINE|L2 250090 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr1-14619 chr1 55514786 55514996 + 6.48 0.000 Intergenic Intergenic 289250 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr7-2411 chr7 73631572 73631782 + 6.48 0.000 Intergenic AluJr|SINE|Alu -7155 NM_032951 51085 Hs.647055 NM_032951 ENSG00000009950 MLXIPL CHREBP|MIO|MLX|MONDOB|WBSCR14|WS-bHLH|bHLHd14 MLX interacting protein like protein-coding chr5-8946 chr5 159290829 159291039 + 6.48 0.000 Intergenic Intergenic 27644 NM_145049 134510 Hs.591733 NM_145049 ENSG00000164332 UBLCP1 CPUB1 ubiquitin like domain containing CTD phosphatase 1 protein-coding chr10-4376 chr10 42953484 42953694 + 6.48 0.000 Intergenic Intergenic 27918 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr11-8381 chr11 90739094 90739304 + 6.48 0.000 intron (NR_104190, intron 3 of 6) intron (NR_104190, intron 3 of 6) 130003 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr14-3744 chr14 37802668 37802878 + 6.48 0.000 intron (NM_001368142, intron 4 of 12) AluSx|SINE|Alu 30390 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chrX-4419 chrX 53659718 53659928 + 6.48 0.000 intron (NM_031407, intron 3 of 83) L1MC1|LINE|L1 26896 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr1-10243 chr1 117065699 117065909 + 6.48 0.000 intron (NM_003594, intron 3 of 22) intron (NM_003594, intron 3 of 22) 5478 NM_003594 8458 Hs.32333 NM_003594 ENSG00000116830 TTF2 HuF2|ZGRF6 transcription termination factor 2 protein-coding chr8-2369 chr8 37820713 37820923 + 6.48 0.000 intron (NM_032777, intron 2 of 18) intron (NM_032777, intron 2 of 18) 23935 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr13-2106 chr13 85313568 85313778 + 6.48 0.000 Intergenic Intergenic -49930 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr10-8866 chr10 112356882 112357092 + 6.48 0.000 promoter-TSS (NR_028134) promoter-TSS (NR_028134) -392 NR_028134 390003 Hs.534691 NR_028134 ENSG00000243316 GUCY2GP GUCY2G guanylate cyclase 2G, pseudogene pseudo chr3-8646 chr3 175667771 175667981 + 6.48 0.000 intron (NM_207015, intron 11 of 13) intron (NM_207015, intron 11 of 13) 108457 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr2-10572 chr2 240701113 240701323 + 6.48 0.000 Intergenic CpG 9352 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr2-14171 chr2 205352747 205352957 + 6.48 0.000 intron (NM_205863, intron 18 of 21) intron (NM_205863, intron 18 of 21) -329648 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr15-5001 chr15 80757639 80757849 + 6.48 0.000 Intergenic AluJr|SINE|Alu -21626 NM_001293298 57214 Hs.459088 NM_018689 ENSG00000103888 CEMIP CCSP1|HYBID|KIAA1199|TMEM2L cell migration inducing hyaluronidase 1 protein-coding chr12-4514 chr12 23535718 23535928 + 6.48 0.000 intron (NM_152989, intron 17 of 17) intron (NM_152989, intron 17 of 17) 48763 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr10-2293 chr10 20623214 20623424 + 6.48 0.000 Intergenic Intergenic 71349 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr7-4494 chr7 151052224 151052434 + 6.48 0.000 intron (NM_020322, intron 9 of 9) intron (NM_020322, intron 9 of 9) 3798 NM_004769 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chr17-5482 chr17 41437832 41438042 + 6.48 0.000 intron (NM_006771, intron 6 of 6) intron (NM_006771, intron 6 of 6) 3407 NM_006771 8687 Hs.248188 NM_006771 ENSG00000171360 KRT38 HA8|KRTHA8|hHa8 keratin 38 protein-coding chr2-10929 chr2 74701122 74701332 + 6.48 0.000 Intergenic Intergenic 46980 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chrX-2691 chrX 119015407 119015617 + 6.48 0.000 intron (NM_001031855, intron 10 of 10) intron (NM_001031855, intron 10 of 10) 39180 NM_001289109 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr5-8254 chr5 111596424 111596634 + 6.48 0.000 intron (NR_040093, intron 1 of 6) MER52A|LTR|ERV1 -83932 NR_131752 134429 Hs.93842 NM_139164 ENSG00000164211 STARD4 - StAR related lipid transfer domain containing 4 protein-coding chr4-6064 chr4 7262722 7262932 + 6.48 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -47623 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr15-4157 chr15 90158595 90158805 + 6.48 0.000 Intergenic L2b|LINE|L2 -26220 NM_001324029 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr17-5157 chr17 8996629 8996839 + 6.48 0.000 Intergenic MER20B|DNA|hAT-Charlie -24776 NM_004822 9423 Hs.660885 NM_004822 ENSG00000065320 NTN1 MRMV4|NTN1L netrin 1 protein-coding chr5-3546 chr5 37463866 37464076 + 6.48 0.000 intron (NM_001345998, intron 7 of 17) intron (NM_001345998, intron 7 of 17) 84653 NM_001345999 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr15-5023 chr15 82210066 82210276 + 6.48 0.000 intron (NM_001040610, intron 13 of 17) intron (NM_001040610, intron 13 of 17) 52357 NM_001322845 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr17-7255 chr17 2468620 2468830 + 6.48 0.000 intron (NM_024086, intron 4 of 9) AluJr|SINE|Alu 43163 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr6-5373 chr6 151010254 151010464 + 6.48 0.000 intron (NM_001350486, intron 21 of 27) intron (NM_001350486, intron 21 of 27) 3351 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr8-6332 chr8 49955327 49955537 + 6.48 0.000 intron (NR_135798, intron 1 of 15) intron (NR_135798, intron 1 of 15) 44025 NR_135796 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr15-4464 chr15 48457153 48457363 + 6.48 0.000 intron (NM_000138, intron 43 of 65) intron (NM_000138, intron 43 of 65) 125061 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr5-5951 chr5 96735052 96735262 + 6.48 0.000 intron (NM_001042446, intron 5 of 26) intron (NM_001042446, intron 5 of 26) -8445 NR_104285 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr10-3864 chr10 29589106 29589316 + 6.48 0.000 intron (NM_001323599, intron 3 of 38) intron (NM_001323599, intron 3 of 38) 13135 NR_030634 100126327 NR_030634 ENSG00000216035 MIR938 MIRN938|hsa-mir-938 microRNA 938 ncRNA chr10-7061 chr10 86194702 86194912 + 6.48 0.000 intron (NM_017551, intron 3 of 15) intron (NM_017551, intron 3 of 15) 69981 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr5-9213 chr5 180873737 180873947 + 6.48 0.000 Intergenic MLT2B4|LTR|ERVL -12556 NM_001172638 643836 Hs.509227 NM_152283 ENSG00000196670 ZFP62 ZET|ZNF755 ZFP62 zinc finger protein protein-coding chr2-13961 chr2 187850772 187850982 + 6.48 0.000 Intergenic Intergenic -296372 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chrX-3370 chrX 148576563 148576773 + 6.48 0.000 intron (NM_001169124, intron 1 of 19) intron (NM_001169124, intron 1 of 19) 76051 NM_001169124 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr1-12421 chr1 11361351 11361561 + 6.48 0.000 Intergenic AluSq2|SINE|Alu 88258 NM_013319 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr11-3818 chr11 67345986 67346196 + 6.48 0.000 intron (NR_024469, intron 2 of 3) intron (NR_024469, intron 2 of 3) 7455 NM_021173 57804 Hs.523829 NM_021173 ENSG00000175482 POLD4 POLDS|p12 DNA polymerase delta 4, accessory subunit protein-coding chr21-868 chr21 39387881 39388091 + 6.48 0.000 intron (NM_001146218, intron 1 of 4) intron (NM_001146218, intron 1 of 4) 223 NR_146616 7485 Hs.198308 NM_004627 ENSG00000182093 GET1 CHD5|WRB guided entry of tail-anchored proteins factor 1 protein-coding chr4-5353 chr4 184813733 184813943 + 6.48 0.000 intron (NM_001995, intron 1 of 20) intron (NM_001995, intron 1 of 20) -1579 NM_001286708 2180 Hs.406678 NM_001995 ENSG00000151726 ACSL1 ACS1|FACL1|FACL2|LACS|LACS1|LACS2 acyl-CoA synthetase long chain family member 1 protein-coding chr10-6520 chr10 66491825 66492035 + 6.48 0.000 intron (NM_001127384, intron 11 of 17) intron (NM_001127384, intron 11 of 17) -434106 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr2-13540 chr2 152406069 152406279 + 6.48 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 71000 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr15-4816 chr15 73248191 73248401 + 6.48 0.000 intron (NM_002499, intron 9 of 28) L2c|LINE|L2 -51614 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chrX-2702 chrX 120098694 120098904 + 6.48 0.000 intron (NR_131238, intron 1 of 4) Harlequin-int|LTR|ERV1 17114 NM_139282 158800 Hs.644617 NM_139282 ENSG00000101883 RHOXF1 OTEX|PEPP1 Rhox homeobox family member 1 protein-coding chr12-7057 chr12 40856054 40856264 + 6.48 0.000 intron (NM_001256064, intron 1 of 15) Charlie2a|DNA|hAT-Charlie 28221 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr21-1431 chr21 23213183 23213393 + 6.48 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 134004 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA chr14-2318 chr14 89616661 89616871 + 6.48 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 2399 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr18-2230 chr18 68448863 68449073 + 6.48 0.000 Intergenic L1MA7|LINE|L1 266140 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr10-8742 chr10 103627221 103627431 + 6.48 0.000 intron (NM_001365079, intron 2 of 8) intron (NM_001365079, intron 2 of 8) 50889 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr5-5356 chr5 132209058 132209268 + 6.48 0.000 exon (NM_001365678, exon 8 of 16) exon (NM_001365678, exon 8 of 16) 8755 NR_106888 102465498 NR_106888 ENSG00000283678 MIR6830 hsa-mir-6830 microRNA 6830 ncRNA chr15-3272 chr15 76972674 76972884 + 6.48 0.000 Intergenic L1ME5|LINE|L1 -21901 NM_001321137 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chr10-7810 chr10 42512119 42512329 + 6.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR 36733 NR_026827 84856 Hs.55977 NM_032770 ENSG00000185904 LINC00839 - long intergenic non-protein coding RNA 839 ncRNA chr19-4256 chr19 55901768 55901978 + 6.48 0.000 intron (NM_176810, intron 9 of 10) intron (NM_176810, intron 9 of 10) 30463 NM_176810 126204 Hs.446924 NM_176810 ENSG00000173572 NLRP13 CLR19.7|NALP13|NOD14|PAN13 NLR family pyrin domain containing 13 protein-coding chr13-3061 chr13 36128661 36128871 + 6.48 0.000 intron (NM_001330072, intron 1 of 16) intron (NM_001330072, intron 1 of 16) 2616 NM_001330071 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr7-8217 chr7 32658113 32658323 + 6.48 0.000 intron (NR_036680, intron 5 of 16) intron (NR_036680, intron 5 of 16) 60950 NR_036680 100129460 Hs.633705 NR_036680 DPY19L1P1 - DPY19L1 pseudogene 1 pseudo chr10-8390 chr10 82523141 82523351 + 6.48 0.000 intron (NR_163253, intron 3 of 10) L1MB8|LINE|L1 -290326 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr4-2974 chr4 114330935 114331145 + 6.48 0.000 Intergenic Intergenic -267362 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr8-6716 chr8 86083758 86083968 + 6.48 0.000 Intergenic LTR16A|LTR|ERVL -14195 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr1-5427 chr1 31617997 31618207 + 6.48 0.000 intron (NM_001525, intron 1 of 8) CpG 402 NM_001525 3061 Hs.388226 NM_001525 ENSG00000121764 HCRTR1 OX1R hypocretin receptor 1 protein-coding chr14-4333 chr14 22858979 22859189 + 6.48 0.000 Intergenic AluSx|SINE|Alu -12656 NM_014045 26020 Hs.525232 NM_014045 ENSG00000197324 LRP10 LRP-10|LRP9|MST087|MSTP087 LDL receptor related protein 10 protein-coding chr17-8320 chr17 72270878 72271088 + 6.48 0.000 Intergenic Intergenic -71828 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr11-4114 chr11 35883757 35883967 + 6.48 0.000 Intergenic L1MA7|LINE|L1 -60119 NM_001304263 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr14-4550 chr14 44000582 44000792 + 6.48 0.000 Intergenic L1MA2|LINE|L1 506596 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr5-7600 chr5 43190846 43191056 + 6.48 0.000 Intergenic Intergenic -1274 NM_153361 167359 Hs.25845 NM_153361 ENSG00000177453 NIM1K NIM1 NIM1 serine/threonine protein kinase protein-coding chr20-3932 chr20 33028390 33028600 + 6.48 0.000 Intergenic Intergenic -3153 NM_174897 128859 Hs.375090 NM_174897 ENSG00000167104 BPIFB6 BPIL3|LPLUNC6 BPI fold containing family B member 6 protein-coding chr3-11256 chr3 197560201 197560411 + 6.48 0.000 intron (NM_203315, intron 1 of 6) LTR10C|LTR|ERV1 -4338 NM_004051 622 Hs.274539 NM_004051 ENSG00000161267 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase 1 protein-coding chr21-509 chr21 33082954 33083164 + 6.48 0.000 Intergenic L1ME4a|LINE|L1 12918 NM_138983 116448 Hs.56663 NM_138983 ENSG00000184221 OLIG1 BHLHB6|BHLHE21 oligodendrocyte transcription factor 1 protein-coding chr3-4201 chr3 131160080 131160290 + 6.48 0.000 intron (NM_001353043, intron 10 of 17) L1PA13|LINE|L1 132457 NM_001321223 79858 Hs.657336 NM_024800 ENSG00000114670 NEK11 - NIMA related kinase 11 protein-coding chr15-2360 chr15 40117068 40117278 + 6.48 0.000 Intergenic Intergenic -8294 NM_001003940 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr2-9409 chr2 231849394 231849604 + 6.48 0.000 Intergenic MER20|DNA|hAT-Charlie 42799 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr17-4216 chr17 35764184 35764394 + 6.48 0.000 exon (NM_145272, exon 2 of 3) exon (NM_145272, exon 2 of 3) 3402 NM_145272 146853 Hs.127194 NM_145272 ENSG00000270806 C17orf50 - chromosome 17 open reading frame 50 protein-coding chr4-7052 chr4 29109725 29109935 + 6.48 0.000 Intergenic L2a|LINE|L2 -104462 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr16-1810 chr16 28301008 28301218 + 6.48 0.000 intron (NM_001024401, intron 1 of 3) intron (NM_001024401, intron 1 of 3) 8588 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr21-972 chr21 45831376 45831586 + 6.48 0.000 intron (NR_038876, intron 2 of 2) intron (NR_038876, intron 2 of 2) 4938 NR_038876 100129027 Hs.689591 NR_038876 ENSG00000205424 LOC100129027 - uncharacterized LOC100129027 ncRNA chr16-5723 chr16 84005679 84005889 + 6.48 0.000 Intergenic Intergenic 36373 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr18-2019 chr18 43995866 43996076 + 6.48 0.000 Intergenic Intergenic 535726 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr7-9725 chr7 157045236 157045446 + 6.48 0.000 Intergenic Intergenic 34484 NR_038835 645249 Hs.224879 NR_038835 ENSG00000243479 MNX1-AS1 CCAT5 MNX1 antisense RNA 1 (head to head) ncRNA chr3-11160 chr3 189626196 189626406 + 6.48 0.000 intron (NM_001329964, intron 1 of 13) intron (NM_001329964, intron 1 of 13) -5088 NM_001329148 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr11-6011 chr11 23642512 23642722 + 6.48 0.000 Intergenic L1MA1|LINE|L1 -223427 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr1-13105 chr1 187270313 187270523 + 6.48 0.000 intron (NR_126347, intron 1 of 3) MLT1J-int|LTR|ERVL-MaLR -173210 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr11-6193 chr11 45593360 45593570 + 6.48 0.000 Intergenic Intergenic 72157 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr20-4454 chr20 62227395 62227605 + 6.48 0.000 promoter-TSS (NR_160555) promoter-TSS (NR_160555) -743 NR_160555 105369209 Hs.711994 NR_160555 LOC105369209 - uncharacterized LOC105369209 ncRNA chr20-3693 chr20 14445527 14445737 + 6.48 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) -107965 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr3-10009 chr3 100702401 100702611 + 6.48 0.000 Intergenic L1ME2|LINE|L1 -6784 NM_001007565 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr5-7730 chr5 59367780 59367990 + 6.48 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) -10915 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5-7959 chr5 81185488 81185698 + 6.48 0.000 intron (NM_006909, intron 18 of 26) LTR78|LTR|ERV1 -47727 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr15-4044 chr15 64197163 64197373 + 6.48 0.000 intron (NM_001329605, intron 10 of 12) intron (NM_001329605, intron 10 of 12) -34113 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding chr2-8422 chr2 118960891 118961101 + 6.48 0.000 intron (NM_006770, intron 1 of 16) L1PA10|LINE|L1 18827 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding chr5-6954 chr5 141658203 141658413 + 6.48 0.000 intron (NM_022481, intron 25 of 32) (CA)n|Simple_repeat|Simple_repeat -6890 NM_033449 89848 Hs.591257 NM_033449 ENSG00000197948 FCHSD1 NWK2 FCH and double SH3 domains 1 protein-coding chr3-10978 chr3 178171446 178171656 + 6.48 0.000 Intergenic Intergenic -247650 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr14-4585 chr14 50031838 50032048 + 6.48 0.000 intron (NR_131171, intron 6 of 8) intron (NR_131171, intron 6 of 8) -24423 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr16-5623 chr16 60220546 60220756 + 6.48 0.000 Intergenic LTR49-int|LTR|ERV1 139142 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr2-13188 chr2 120987874 120988084 + 6.48 0.000 intron (NM_005270, intron 13 of 13) FLAM_A|SINE|Alu 195698 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2-10706 chr2 27111253 27111463 + 6.48 0.000 intron (NM_006569, intron 1 of 5) LTR12C|LTR|ERV1 7769 NM_001301324 10669 Hs.159525 NM_006569 ENSG00000138028 CGREF1 CGR11 cell growth regulator with EF-hand domain 1 protein-coding chr10-2931 chr10 13458638 13458848 + 6.48 0.000 intron (NM_001370075, intron 5 of 8) intron (NM_001370075, intron 5 of 8) 44233 NM_152751 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr21-1603 chr21 16842810 16843020 + 6.48 0.000 Intergenic Intergenic 252678 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr17-8317 chr17 72207924 72208134 + 6.48 0.000 Intergenic Intergenic 87009 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box transcription factor 9 protein-coding chr10-6846 chr10 25058604 25058814 + 6.48 0.000 intron (NM_001270383, intron 2 of 5) AluSx|SINE|Alu 3570 NM_001270383 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr1-16279 chr1 213503131 213503341 + 6.48 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -421513 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr2-7917 chr2 58379521 58379731 + 6.48 0.000 Intergenic MLT2B4|LTR|ERVL 103749 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA chr8-4096 chr8 68883517 68883727 + 6.48 0.000 Intergenic MER4CL34|LTR|ERV1 220568 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr7-9179 chr7 115357217 115357427 + 6.48 0.000 Intergenic Intergenic -125967 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr12-8040 chr12 114192098 114192308 + 6.48 0.000 Intergenic L2b|LINE|L2 49567 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr11-3023 chr11 1208371 1208581 + 6.48 0.000 Intergenic Intergenic -14590 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr16-3026 chr16 47889728 47889938 + 6.48 0.000 intron (NR_110650, intron 4 of 5) intron (NR_110650, intron 4 of 5) -2703 NR_110649 100507534 Hs.407601 NR_110649 ENSG00000261325 LINC02192 - long intergenic non-protein coding RNA 2192 ncRNA chr8-5720 chr8 132332672 132332882 + 6.48 0.000 intron (NM_004519, intron 1 of 14) L2c|LINE|L2 114485 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr12-3945 chr12 5433562 5433772 + 6.48 0.000 intron (NM_001102654, intron 1 of 1) CpG 1559 NM_001102654 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr9-5751 chr9 126989663 126989873 + 6.48 0.000 intron (NM_001190729, intron 4 of 17) intron (NM_001190729, intron 4 of 17) 27543 NM_001190728 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chrX-3170 chrX 30213693 30213903 + 6.48 0.000 Intergenic Intergenic -1765 NM_002364 4113 Hs.113824 NM_002364 ENSG00000099399 MAGEB2 CT3.2|DAM6|MAGE-XP-2 MAGE family member B2 protein-coding chr3-10693 chr3 151384036 151384246 + 6.48 0.000 exon (NM_053002, exon 33 of 43) exon (NM_053002, exon 33 of 43) 671 NM_022788 64805 Hs.591281 NM_022788 ENSG00000169313 P2RY12 ADPG-R|BDPLT8|HORK3|P2T(AC)|P2Y(12)R|P2Y(AC)|P2Y(ADP)|P2Y(cyc)|P2Y12|SP1999 purinergic receptor P2Y12 protein-coding chr10-7256 chr10 125584021 125584231 + 6.48 0.000 intron (NM_001318133, intron 3 of 3) MLT1H|LTR|ERVL-MaLR 9755 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chrX-5214 chrX 135184044 135184254 + 6.48 0.000 Intergenic Intergenic -12322 NM_017863 54967 Hs.272804 NM_017863 ENSG00000169551 CT55 BJHCC20A|CXorf48 cancer/testis antigen 55 protein-coding chr7-2464 chr7 1305661 1305871 + 6.48 0.000 Intergenic L2|LINE|L2 72894 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr13-2782 chr13 100270846 100271056 + 6.48 0.000 intron (NR_148031, intron 11 of 22) AluJb|SINE|Alu 181858 NM_001352606 5095 Hs.80741 NM_000282 ENSG00000175198 PCCA - propionyl-CoA carboxylase subunit alpha protein-coding chr20-2508 chr20 34129746 34129956 + 6.48 0.000 Intergenic HERVK-int|LTR|ERVK -17608 NM_001316363 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr1-11681 chr1 3439721 3439931 + 6.48 0.000 Intergenic Intergenic -14839 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr13-676 chr13 113231713 113231923 + 6.48 0.000 intron (NM_001008895, intron 5 of 19) intron (NM_001008895, intron 5 of 19) 22205 NM_001354943 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr5-4037 chr5 38258723 38258933 + 6.48 0.000 exon (NM_001205301, exon 1 of 23) exon (NM_001205301, exon 1 of 23) 269 NM_152403 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr4-3431 chr4 79898177 79898387 + 6.48 0.000 Intergenic Intergenic 70811 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr7-4834 chr7 101729439 101729649 + 6.48 0.000 Intergenic Intergenic -86463 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr1-3618 chr1 40802474 40802684 + 6.48 0.000 intron (NM_004700, intron 1 of 13) CpG 18792 NM_172163 9132 Hs.473058 NM_004700 ENSG00000117013 KCNQ4 DFNA2|DFNA2A|KV7.4 potassium voltage-gated channel subfamily Q member 4 protein-coding chr14-3618 chr14 56130041 56130251 + 6.48 0.000 intron (NM_021255, intron 1 of 5) intron (NM_021255, intron 1 of 5) 11735 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr5-5294 chr5 125683521 125683731 + 6.48 0.000 Intergenic Intergenic 190365 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr12-7377 chr12 56880906 56881116 + 6.48 0.000 Intergenic Intergenic 53397 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chrX-5459 chrX 154610622 154610832 + 6.48 0.000 Intergenic HERVK-int|LTR|ERVK 8544 NM_001327 1485 Hs.534310 NM_001327 ENSG00000184033 CTAG1B CT6.1|CTAG|CTAG1|ESO1|LAGE-2|LAGE2B|NY-ESO-1 cancer/testis antigen 1B protein-coding chr7-4597 chr7 18001782 18001992 + 6.48 0.000 Intergenic Intergenic 25959 NM_175886 221823 Hs.169284 NM_175886 ENSG00000229937 PRPS1L1 PRPS1|PRPS3|PRPSL|PRS-III phosphoribosyl pyrophosphate synthetase 1 like 1 protein-coding chr6-7632 chr6 79650310 79650520 + 6.48 0.000 intron (NM_031469, intron 1 of 3) MSTB1|LTR|ERVL-MaLR 19086 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chr15-3443 chr15 91098331 91098541 + 6.48 0.000 Intergenic Intergenic -1152 NM_001323031 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr6-7762 chr6 94420625 94420835 + 6.48 0.000 Intergenic L1MA7|LINE|L1 702427 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr1-10737 chr1 198228943 198229153 + 6.48 0.000 intron (NM_133494, intron 1 of 9) MER21A|LTR|ERVL 72050 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr15-4840 chr15 73886288 73886498 + 6.48 0.000 intron (NM_001286434, intron 6 of 9) intron (NM_001286434, intron 6 of 9) 12829 NM_153356 161514 Hs.124512 NM_153356 ENSG00000167139 TBC1D21 MgcRabGAP TBC1 domain family member 21 protein-coding chr20-4090 chr20 39678416 39678626 + 6.48 0.000 Intergenic Intergenic -325940 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr14-5029 chr14 79230009 79230219 + 6.48 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) 30132 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr1-13236 chr1 217885130 217885340 + 6.48 0.000 Intergenic Intergenic -7665 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chr2-14012 chr2 191269659 191269869 + 6.48 0.000 intron (NM_012223, intron 1 of 28) L2|LINE|L2 24360 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr10-5203 chr10 61108004 61108214 + 6.48 0.000 Intergenic Intergenic 91834 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr17-4582 chr17 82766982 82767192 + 6.48 0.000 intron (NM_005993, intron 4 of 38) MER68|LTR|ERVL 15022 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr7-7663 chr7 150986162 150986372 + 6.48 0.000 Intergenic Intergenic -4750 NM_000603 4846 Hs.647092 NM_000603 ENSG00000164867 NOS3 ECNOS|eNOS nitric oxide synthase 3 protein-coding chr15-4581 chr15 59435646 59435856 + 6.48 0.000 Intergenic Intergenic -2435 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding chr8-7340 chr8 134508020 134508230 + 6.48 0.000 intron (NM_001174158, intron 13 of 13) L4_B_Mam|LINE|RTE-X -89946 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr3-6582 chr3 124363978 124364188 + 6.48 0.000 intron (NM_001024660, intron 10 of 59) intron (NM_001024660, intron 10 of 59) -10249 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr12-4384 chr12 5473067 5473277 + 6.48 0.000 intron (NM_001102654, intron 1 of 1) intron (NM_001102654, intron 1 of 1) -20960 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr3-8055 chr3 4897809 4898019 + 6.48 0.000 non-coding (NR_125914, exon 3 of 3) non-coding (NR_125914, exon 3 of 3) 8587 NR_125914 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr10-3946 chr10 101282307 101282517 + 6.48 0.000 Intergenic Intergenic -18862 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr7-7955 chr7 11599209 11599419 + 6.48 0.000 intron (NM_015204, intron 2 of 26) HERVL-int|LTR|ERVL 232884 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr3-10705 chr3 152656302 152656512 + 6.48 0.000 Intergenic Intergenic -178724 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr5-8889 chr5 155329577 155329787 + 6.48 0.000 Intergenic Intergenic 315927 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr1-6172 chr1 200888440 200888650 + 6.48 0.000 Intergenic Intergenic -2986 NM_018265 55765 Hs.518997 NM_018265 ENSG00000163362 INAVA C1orf106 innate immunity activator protein-coding chr9-2746 chr9 98006555 98006765 + 6.48 0.000 intron (NM_006401, intron 4 of 6) Charlie3|DNA|hAT-Charlie 23319 NM_006401 10541 Hs.730654 NM_006401 ENSG00000136938 ANP32B APRIL|PHAPI2|SSP29 acidic nuclear phosphoprotein 32 family member B protein-coding chrX-1868 chrX 119324948 119325158 + 6.48 0.000 intron (NR_110396, intron 2 of 3) AluSp|SINE|Alu 33524 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr8-7096 chr8 118168375 118168585 + 6.48 0.000 intron (NR_146234, intron 4 of 5) intron (NR_146234, intron 4 of 5) -56661 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr16-5516 chr16 20071927 20072137 + 6.48 0.000 intron (NM_001318483, intron 1 of 2) intron (NM_001318483, intron 1 of 2) 1746 NM_001002911 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr11-8376 chr11 87525274 87525484 + 6.48 0.000 Intergenic LTR51|LTR|ERV1 194032 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr10-8627 chr10 98030753 98030963 + 6.48 0.000 promoter-TSS (NM_018058) promoter-TSS (NM_018058) -30 NM_001206528 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr14-4234 chr14 99775188 99775398 + 6.48 0.000 Intergenic L2b|LINE|L2 -18120 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr7-5828 chr7 84701890 84702100 + 6.48 0.000 Intergenic MLT2B5|LTR|ERVL 169519 NR_110080 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr2-8090 chr2 75079625 75079835 + 6.48 0.000 intron (NM_015727, intron 2 of 3) intron (NM_015727, intron 2 of 3) -11082 NR_049796 100846995 NR_049796 ENSG00000263909 MIR5000 - microRNA 5000 ncRNA chr8-4911 chr8 94964301 94964511 + 6.48 0.000 intron (NM_001354534, intron 2 of 8) AluJo|SINE|Alu 14846 NR_148907 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr19-4740 chr19 24098488 24098698 + 6.48 0.000 intron (NM_001278662, intron 2 of 4) intron (NM_001278662, intron 2 of 4) 11406 NM_203282 9534 Hs.434406 NM_004876 ENSG00000213096 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding chr1-6381 chr1 9390359 9390569 + 6.48 0.000 Intergenic MER4E1|LTR|ERV1 38452 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr8-3652 chr8 6225230 6225440 + 6.48 0.000 Intergenic Intergenic 181213 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr6-8025 chr6 118583490 118583700 + 6.48 0.000 intron (NM_001042475, intron 2 of 12) HUERS-P3-int|LTR|ERV1 35299 NM_002667 5350 Hs.170839 NM_002667 ENSG00000198523 PLN CMD1P|CMH18|PLB phospholamban protein-coding chrX-4783 chrX 97707651 97707861 + 6.48 0.000 Intergenic Intergenic -143221 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr7-4182 chr7 122352283 122352493 + 6.48 0.000 intron (NM_001167940, intron 27 of 29) intron (NM_001167940, intron 27 of 29) -47638 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chr1-10246 chr1 117625888 117626098 + 6.48 0.000 3' UTR (NM_017709, exon 2 of 2) 3' UTR (NM_017709, exon 2 of 2) 19945 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr11-9164 chr11 34997856 34998066 + 6.48 0.000 Intergenic Intergenic 56124 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr12-7905 chr12 108055595 108055805 + 6.48 0.000 Intergenic Intergenic -73588 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr6-7612 chr6 76867281 76867491 + 6.48 0.000 Intergenic L1MDa|LINE|L1 -273763 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr6-5265 chr6 137581561 137581771 + 6.48 0.000 Intergenic Intergenic -83980 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr2-14429 chr2 222076985 222077195 + 6.48 0.000 Intergenic Intergenic -221057 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr16-1515 chr16 30169461 30169671 + 6.48 0.000 Intergenic SVA_D|Retroposon|SVA -13844 NM_001193333 11151 Hs.415067 NM_007074 ENSG00000102879 CORO1A CLABP|CLIPINA|HCORO1|IMD8|TACO|p57 coronin 1A protein-coding chr2-7150 chr2 197873296 197873506 + 6.48 0.000 intron (NM_006226, intron 1 of 5) intron (NM_006226, intron 1 of 5) 68808 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr14-4077 chr14 64250724 64250934 + 6.48 0.000 intron (NR_073496, intron 5 of 7) intron (NR_073496, intron 5 of 7) 32246 NM_001271876 2100 Hs.660607 NM_001437 ENSG00000140009 ESR2 ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8 estrogen receptor 2 protein-coding chr9-8325 chr9 114960510 114960720 + 6.48 0.000 Intergenic Intergenic -30020 NM_001244 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr18-3170 chr18 43009695 43009905 + 6.48 0.000 intron (NM_001272077, intron 2 of 5) intron (NM_001272077, intron 2 of 5) 105885 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr4-7199 chr4 41624026 41624236 + 6.48 0.000 intron (NM_001330672, intron 7 of 31) intron (NM_001330672, intron 7 of 31) 11229 NM_001330983 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr5-5360 chr5 132302493 132302703 + 6.48 0.000 intron (NM_003059, intron 1 of 9) intron (NM_003059, intron 1 of 9) 8204 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding chr10-8847 chr10 110816250 110816460 + 6.48 0.000 intron (NM_001134363, intron 9 of 13) intron (NM_001134363, intron 9 of 13) 54549 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr2-13859 chr2 178079667 178079877 + 6.48 0.000 intron (NM_001077197, intron 2 of 20) L1PA10|LINE|L1 -6995 NM_016953 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr4-3682 chr4 47381287 47381497 + 6.48 0.000 intron (NM_000812, intron 5 of 8) intron (NM_000812, intron 5 of 8) 82310 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chr9-5318 chr9 86918651 86918861 + 6.48 0.000 Intergenic Intergenic 28750 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr14-2696 chr14 82987418 82987628 + 6.48 0.000 Intergenic Intergenic 344891 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr9-8202 chr9 108387716 108387926 + 6.48 0.000 Intergenic MER81|DNA|hAT-Blackjack 468165 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr3-6094 chr3 52466054 52466264 + 6.48 0.000 intron (NM_007184, intron 3 of 20) Charlie15b|DNA|hAT-Charlie 10555 NM_001276293 11188 Hs.435290 NM_007184 ENSG00000010322 NISCH I-1|IR1|IRAS|hIRAS nischarin protein-coding chr2-6642 chr2 1969834 1970044 + 6.48 0.000 intron (NM_015025, intron 8 of 24) MLT1L|LTR|ERVL-MaLR -225424 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr21-1597 chr21 16283724 16283934 + 6.48 0.000 TTS (NR_145757) TTS (NR_145757) 939 NR_145757 109617014 NR_145757 ENSG00000201025 SNORD74B - small nucleolar RNA, C/D box 74B snoRNA chr11-10718 chr11 131210196 131210406 + 6.48 0.000 Intergenic L1MA3|LINE|L1 -160314 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr6-3223 chr6 139577984 139578194 + 6.48 0.000 Intergenic Intergenic -103493 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr1-13760 chr1 16498251 16498461 + 6.48 0.000 Intergenic Intergenic -5655 NR_023386 114819 Hs.597881 NR_023386 ENSG00000080947 CROCCP3 CROCCL2|dJ798A10.2 CROCC pseudogene 3 pseudo chr11-8442 chr11 112097853 112098063 + 6.48 0.000 Intergenic L2c|LINE|L2 11085 NM_001276503 6392 Hs.356270 NM_003002 ENSG00000204370 SDHD CBT1|CII-4|CWS3|PGL|PGL1|QPs3|SDH4|cybS succinate dehydrogenase complex subunit D protein-coding chr2-5065 chr2 8091142 8091352 + 6.48 0.000 intron (NR_034135, intron 7 of 8) L2c|LINE|L2 -114433 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr12-5569 chr12 11917314 11917524 + 6.48 0.000 Intergenic Intergenic -132442 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chrX-2486 chrX 87778886 87779096 + 6.48 0.000 Intergenic L1P3|LINE|L1 261189 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chrX-5311 chrX 144269188 144269398 + 6.48 0.000 Intergenic L1PREC2|LINE|L1 385222 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chrX-1187 chrX 57592820 57593030 + 6.48 0.000 exon (NM_007157, exon 1 of 1) exon (NM_007157, exon 1 of 1) 1089 NM_007157 158586 Hs.156257 NM_007157 ENSG00000198455 ZXDB ZNF905|dJ83L6.1 zinc finger X-linked duplicated B protein-coding chr2-8838 chr2 172312051 172312261 + 6.48 0.000 Intergenic Intergenic -115180 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr7-9395 chr7 131157432 131157642 + 6.48 0.000 intron (NM_001145354, intron 2 of 18) MIRb|SINE|MIR 47443 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr8-6317 chr8 46953267 46953477 + 6.48 0.000 Intergenic Intergenic 112486 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr6-1263 chr6 43449176 43449386 + 6.48 0.000 intron (NM_033450, intron 18 of 19) intron (NM_033450, intron 18 of 19) 6267 NM_001286656 65989 Hs.337251 NM_023932 ENSG00000171462 DLK2 DLK-2|EGFL9 delta like non-canonical Notch ligand 2 protein-coding chr18-2741 chr18 78405811 78406021 + 6.48 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -412189 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr7-5396 chr7 33669272 33669482 + 6.48 0.000 Intergenic Intergenic -235538 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr2-4580 chr2 86475503 86475713 + 6.48 0.000 intron (NM_018433, intron 12 of 25) intron (NM_018433, intron 12 of 25) 34147 NM_001146688 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr8-2220 chr8 22088135 22088345 + 6.48 0.000 promoter-TSS (NR_148731) promoter-TSS (NR_148731) -910 NM_001354250 64760 Hs.491223 NM_022749 ENSG00000158863 FAM160B2 RAI16 family with sequence similarity 160 member B2 protein-coding chrX-2379 chrX 69381371 69381581 + 6.48 0.000 Intergenic Tigger18a|DNA|TcMar-Tigger -123759 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr2-10681 chr2 24478445 24478655 + 6.48 0.000 Intergenic Intergenic -12704 NM_003743 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr7-4031 chr7 155924683 155924893 + 6.48 0.000 Intergenic AluSc|SINE|Alu -36431 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr11-10590 chr11 123509821 123510031 + 6.48 0.000 promoter-TSS (NM_001330396) promoter-TSS (NM_001330396) 10 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr14-2727 chr14 95442507 95442717 + 6.48 0.000 intron (NM_001363692, intron 10 of 16) intron (NM_001363692, intron 10 of 16) 33223 NM_152592 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|KASH3|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chrX-3625 chrX 87441670 87441880 + 6.48 0.000 Intergenic L1M1|LINE|L1 -76027 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr9-6549 chr9 117036607 117036817 + 6.48 0.000 intron (NM_014010, intron 5 of 21) MER74A|LTR|ERVL 144489 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr7-6027 chr7 107779762 107779972 + 6.48 0.000 intron (NM_000111, intron 11 of 20) intron (NM_000111, intron 11 of 20) 23366 NM_000111 1811 Hs.1650 NM_000111 ENSG00000091138 SLC26A3 CLD|DRA solute carrier family 26 member 3 protein-coding chr22-3507 chr22 48850434 48850644 + 6.48 0.000 Intergenic Intergenic -16231 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr7-9462 chr7 134872502 134872712 + 6.48 0.000 intron (NM_033157, intron 3 of 14) intron (NM_033157, intron 3 of 14) -18793 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr8-4805 chr8 6296056 6296266 + 6.48 0.000 Intergenic AluJb|SINE|Alu 110387 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr19-5765 chr19 23437174 23437384 + 6.48 0.000 Intergenic Intergenic -21205 NR_126448 104472717 Hs.162105 NR_126448 ENSG00000269416 LINC01224 - long intergenic non-protein coding RNA 1224 ncRNA chr17-3960 chr17 63476998 63477208 + 6.48 0.000 promoter-TSS (NM_000789) promoter-TSS (NM_000789) 42 NM_000789 1636 Hs.298469 NM_000789 ENSG00000159640 ACE ACE1|CD143|DCP|DCP1 angiotensin I converting enzyme protein-coding chr6-8365 chr6 149086113 149086323 + 6.48 0.000 Intergenic Intergenic -53557 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr11-8779 chr11 10139577 10139787 + 6.48 0.000 intron (NM_030962, intron 2 of 39) intron (NM_030962, intron 2 of 39) 154525 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr20-3198 chr20 49850468 49850678 + 6.48 0.000 intron (NR_048539, intron 6 of 13) intron (NR_048539, intron 6 of 13) -13286 NR_162136 113219455 NR_162136 MIR12122 - microRNA 12122 ncRNA chr20-4113 chr20 41483732 41483942 + 6.48 0.000 intron (NM_032221, intron 15 of 36) intron (NM_032221, intron 15 of 36) -117019 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr17-5392 chr17 32488832 32489042 + 6.48 0.000 3' UTR (NM_003885, exon 2 of 2) 3' UTR (NM_003885, exon 2 of 2) 1944 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr19-5473 chr19 39672888 39673098 + 6.48 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -6381 NR_034156 400696 Hs.456377 NM_207646 ENSG00000226025 LGALS17A - galectin 14 pseudogene pseudo chr9-6416 chr9 69020423 69020633 + 6.48 0.000 Intergenic Intergenic -6405 NM_002732 5568 Hs.158029 NM_002732 ENSG00000165059 PRKACG BDPLT19|KAPG|PKACg protein kinase cAMP-activated catalytic subunit gamma protein-coding ML143364.1-6 ML143364.1 94535 94745 + 6.48 0.000 NA NA NA NA chr9-6117 chr9 6527914 6528124 + 6.48 0.000 Intergenic Intergenic 114820 NM_152896 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr6-5185 chr6 130314475 130314685 + 6.48 0.000 intron (NM_001258275, intron 1 of 13) intron (NM_001258275, intron 1 of 13) 51288 NM_001258275 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr2-14357 chr2 218839214 218839424 + 6.48 0.000 Intergenic (TCC)n|Simple_repeat|Simple_repeat -7516 NM_017431 53632 Hs.591634 NM_017431 ENSG00000115592 PRKAG3 AMPKG3 protein kinase AMP-activated non-catalytic subunit gamma 3 protein-coding chr15-3976 chr15 46818259 46818469 + 6.48 0.000 Intergenic Intergenic -365725 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr10-8809 chr10 108190067 108190277 + 6.48 0.000 Intergenic AluSc8|SINE|Alu -120879 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr7-6888 chr7 68551149 68551359 + 6.48 0.000 Intergenic (AAT)n|Simple_repeat|Simple_repeat 531001 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr9-7266 chr9 5644590 5644800 + 6.48 0.000 intron (NM_001206557, intron 1 of 24) L1MB7|LINE|L1 15576 NM_001206557 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr7-7044 chr7 139231706 139231916 + 6.48 0.000 exon (NM_173569, exon 1 of 18) exon (NM_173569, exon 1 of 18) 574 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr3-6737 chr3 139106400 139106610 + 6.48 0.000 intron (NR_026783, intron 1 of 2) intron (NR_026783, intron 1 of 2) 2320 NR_026783 60467 Hs.512673 NM_021812 ENSG00000232416 BPESC1 NCRNA00187 blepharophimosis, epicanthus inversus and ptosis candidate 1 ncRNA chr13-3321 chr13 59449196 59449406 + 6.48 0.000 Intergenic Intergenic -563417 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr5-3130 chr5 57693167 57693377 + 6.48 0.000 Intergenic Intergenic 42612 NR_104668 101928505 Hs.119998 NR_104668 LOC101928505 - uncharacterized LOC101928505 ncRNA chr5-6196 chr5 63053831 63054041 + 6.48 0.000 Intergenic Intergenic 475117 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr17-4515 chr17 75182349 75182559 + 6.48 0.000 intron (NM_001005849, intron 1 of 2) CpG 505 NM_001005849 6613 Hs.380973 NM_006937 ENSG00000188612 SUMO2 HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A small ubiquitin like modifier 2 protein-coding chr6-3592 chr6 83682386 83682596 + 6.48 0.000 intron (NM_001256717, intron 4 of 29) AluJb|SINE|Alu 26068 NM_001363677 9892 Hs.368046 NM_014841 ENSG00000065609 SNAP91 AP180|CALM synaptosome associated protein 91 protein-coding chr1-6546 chr1 29912620 29912830 + 6.48 0.000 Intergenic MSTD|LTR|ERVL-MaLR 124887 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr4-2281 chr4 188199702 188199912 + 6.48 0.000 Intergenic Intergenic 60366 NM_178556 339976 Hs.348618 NM_178556 ENSG00000184108 TRIML1 RNF209 tripartite motif family like 1 protein-coding chr20-3744 chr20 18857780 18857990 + 6.48 0.000 Intergenic L1MC|LINE|L1 -27682 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr19-3698 chr19 23117013 23117223 + 6.48 0.000 promoter-TSS (NM_001277403) promoter-TSS (NM_001277403) 93 NM_001277403 100129543 Hs.427120 NM_001277403 ENSG00000183850 ZNF730 - zinc finger protein 730 protein-coding chr19-2882 chr19 33815610 33815820 + 6.48 0.000 TTS (NM_001129995) TTS (NM_001129995) 18845 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr19-4918 chr19 42532806 42533016 + 6.48 0.000 intron (NR_073180, intron 2 of 2) MLT2B3|LTR|ERVL -4430 NM_001184816 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr4-8189 chr4 132867702 132867912 + 6.48 0.000 Intergenic L1M1|LINE|L1 276718 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr2-14140 chr2 203077504 203077714 + 6.48 0.000 intron (NM_001114132, intron 7 of 54) intron (NM_001114132, intron 7 of 54) 62730 NM_001114132 65065 Hs.648846 NM_198945 ENSG00000144426 NBEAL1 A530083I02Rik|ALS2CR16|ALS2CR17 neurobeachin like 1 protein-coding chr17-6804 chr17 7817293 7817503 + 6.48 0.000 exon (NM_020877, exon 65 of 86) exon (NM_020877, exon 65 of 86) -22508 NM_001348716 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr18-2998 chr18 24595931 24596141 + 6.48 0.000 Intergenic Intergenic -32146 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr2-9632 chr2 15050548 15050758 + 6.48 0.000 Intergenic Intergenic 417936 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr15-4593 chr15 60138078 60138288 + 6.48 0.000 Intergenic Intergenic 133872 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr14-3145 chr14 68814844 68815054 + 6.48 0.000 Intergenic Intergenic -18706 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr22-3948 chr22 37410679 37410889 + 6.48 0.000 intron (NM_052906, intron 2 of 2) MIRb|SINE|MIR 16686 NR_110512 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr8-3029 chr8 130301951 130302161 + 6.48 0.000 intron (NM_001362925, intron 3 of 29) L2c|LINE|L2 -5523 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr9-8695 chr9 131030633 131030843 + 6.48 0.000 intron (NM_006059, intron 2 of 27) intron (NM_006059, intron 2 of 27) 21564 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr3-5917 chr3 42257123 42257333 + 6.48 0.000 TTS (NM_001174138) TTS (NM_001174138) 6719 NM_001174138 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr10-5168 chr10 58011652 58011862 + 6.48 0.000 Intergenic MER103C|DNA|hAT-Charlie 256137 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr18-3568 chr18 79150751 79150961 + 6.48 0.000 intron (NR_148360, intron 6 of 31) AluJr4|SINE|Alu 81462 NM_198531 374868 Hs.465475 NM_198531 ENSG00000166377 ATP9B ATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1 ATPase phospholipid transporting 9B (putative) protein-coding chr11-10713 chr11 131072957 131073167 + 6.48 0.000 Intergenic Intergenic -156575 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr15-1257 chr15 80167407 80167617 + 6.48 0.000 intron (NM_000137, intron 5 of 13) intron (NM_000137, intron 5 of 13) 14513 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr2-11647 chr2 6341478 6341688 + 6.48 0.000 Intergenic Intergenic 33839 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr19-3622 chr19 58509651 58509861 + 6.48 0.000 intron (NM_012254, intron 3 of 9) intron (NM_012254, intron 3 of 9) 2236 NM_012254 10998 Hs.292177 NM_012254 ENSG00000083807 SLC27A5 ACSB|ACSVL6|BACS|BAL|FACVL3|FATP-5|FATP5|VLACSR|VLCS-H2|VLCSH2 solute carrier family 27 member 5 protein-coding chr2-11902 chr2 24176546 24176756 + 6.48 0.000 intron (NM_001040710, intron 2 of 5) intron (NM_001040710, intron 2 of 5) 1598 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr12-5870 chr12 50353701 50353911 + 6.48 0.000 exon (NM_001145475, exon 4 of 8) exon (NM_001145475, exon 4 of 8) 42803 NM_001145475 121006 Hs.133187 NM_001145475 ENSG00000185958 FAM186A - family with sequence similarity 186 member A protein-coding chr2-12634 chr2 73218413 73218623 + 6.48 0.000 intron (NM_006062, intron 1 of 12) intron (NM_006062, intron 1 of 12) 4273 NM_006062 10322 Hs.631882 NM_006062 ENSG00000135632 SMYD5 NN8-4AG|RAI15|RRG1|ZMYND23 SMYD family member 5 protein-coding chr12-6994 chr12 30704548 30704758 + 6.48 0.000 Intergenic Intergenic -8784 NM_006390 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr3-3667 chr3 140031282 140031492 + 6.48 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 96202 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr6-4994 chr6 108178464 108178674 + 6.48 0.000 intron (NM_001286102, intron 5 of 8) intron (NM_001286102, intron 5 of 8) 10546 NM_001286102 7101 Hs.157688 NM_003269 ENSG00000112333 NR2E1 TLL|TLX|XTLL nuclear receptor subfamily 2 group E member 1 protein-coding chr15-5157 chr15 91981992 91982202 + 6.48 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 127793 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr3-8198 chr3 42526023 42526233 + 6.48 0.000 intron (NM_001251883, intron 3 of 9) intron (NM_001251883, intron 3 of 9) 6478 NR_046654 100874007 Hs.600642 NR_046654 VIPR1-AS1 - VIPR1 antisense RNA 1 ncRNA chr15-5014 chr15 81689493 81689703 + 6.48 0.000 Intergenic LTR16C|LTR|ERVL -315385 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chrX-1489 chrX 142547958 142548168 + 6.48 0.000 Intergenic Intergenic -342773 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr2-6839 chr2 69213859 69214069 + 6.48 0.000 intron (NM_032208, intron 17 of 17) intron (NM_032208, intron 17 of 17) 110282 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr11-2428 chr11 25062494 25062704 + 6.48 0.000 intron (NM_001009909, intron 10 of 11) AluJb|SINE|Alu 565546 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr8-7418 chr8 140271481 140271691 + 6.48 0.000 intron (NM_001160372, intron 15 of 22) L1ME3A|LINE|L1 -171051 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr11-7990 chr11 11493984 11494194 + 6.48 0.000 intron (NM_001363464, intron 1 of 9) MIR|SINE|MIR 127916 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr6-5959 chr6 81607067 81607277 + 6.48 0.000 Intergenic Intergenic 145509 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr2-12573 chr2 69728160 69728370 + 6.48 0.000 intron (NM_001320698, intron 3 of 14) L1ME3A|LINE|L1 -13869 NM_001153 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr10-4590 chr10 111473118 111473328 + 6.48 0.000 Intergenic AluJr4|SINE|Alu 358932 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr11-7839 chr11 114181148 114181358 + 6.48 0.000 intron (NM_001354752, intron 2 of 4) intron (NM_001354752, intron 2 of 4) -114560 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr21-1677 chr21 26996508 26996718 + 6.48 0.000 Intergenic Charlie15b|DNA|hAT-Charlie -29525 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr4-4823 chr4 108146045 108146255 + 6.48 0.000 intron (NM_001130713, intron 3 of 10) intron (NM_001130713, intron 3 of 10) 20647 NM_001166119 51176 Hs.743478 NM_016269 ENSG00000138795 LEF1 LEF-1|TCF10|TCF1ALPHA|TCF7L3 lymphoid enhancer binding factor 1 protein-coding chr4-6217 chr4 56532644 56532854 + 6.48 0.000 intron (NM_001256475, intron 1 of 8) L2c|LINE|L2 2143 NM_001256475 100506564 Hs.573073 NM_001256475 ENSG00000249693 THEGL - theg spermatid protein like protein-coding chr6-5217 chr6 134035752 134035962 + 6.48 0.000 intron (NM_145176, intron 1 of 4) intron (NM_145176, intron 1 of 4) 16767 NM_145176 154091 Hs.486508 NM_145176 ENSG00000146411 SLC2A12 GLUT12|GLUT8 solute carrier family 2 member 12 protein-coding chr14-4857 chr14 70001926 70002136 + 6.48 0.000 intron (NM_001034852, intron 7 of 11) intron (NM_001034852, intron 7 of 11) 23898 NR_145786 109623479 NR_145786 SNORD169 - small nucleolar RNA, C/D box 169 snoRNA chrX-4100 chrX 24204479 24204689 + 6.48 0.000 intron (NM_001178084, intron 3 of 7) Charlie21a|DNA|hAT-Charlie 54855 NM_001178084 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr2-11894 chr2 23760760 23760970 + 6.48 0.000 intron (NR_125717, intron 25 of 28) intron (NR_125717, intron 25 of 28) 166258 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr3-8331 chr3 68921680 68921890 + 6.48 0.000 intron (NM_001005527, intron 1 of 5) intron (NM_001005527, intron 1 of 5) 10762 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr18-1742 chr18 6740852 6741062 + 6.48 0.000 intron (NM_001366230, intron 1 of 17) intron (NM_001366230, intron 1 of 17) -11095 NR_134645 101927168 Hs.242240 NR_134645 LOC101927168 - uncharacterized LOC101927168 ncRNA chr10-7918 chr10 50972402 50972612 + 6.48 0.000 Intergenic Intergenic -18381 NM_001098512 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chrX-3982 chrX 13921597 13921807 + 6.48 0.000 intron (NM_001318729, intron 1 of 6) AluSg|SINE|Alu 16936 NM_001001994 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr2-8772 chr2 165105254 165105464 + 6.48 0.000 intron (NM_006922, intron 21 of 27) intron (NM_006922, intron 21 of 27) 98691 NM_006922 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr20-3637 chr20 9170483 9170693 + 6.48 0.000 intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) -46802 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr12-5638 chr12 67996217 67996427 + 6.48 0.000 intron (NR_104124, intron 2 of 4) L2a|LINE|L2 6877 NR_104125 100885789 Hs.439832 NR_104124 ENSG00000255733 IFNG-AS1 GS1-410F4.2|NEST|Tmevpg1 IFNG antisense RNA 1 ncRNA chr12-5566 chr12 9067370 9067580 + 6.48 0.000 TTS (NM_001347424) TTS (NM_001347424) 2298 NR_137424 144571 Hs.592432 NR_026971 ENSG00000245105 A2M-AS1 - A2M antisense RNA 1 ncRNA chrX-2171 chrX 38612267 38612477 + 6.48 0.000 intron (NM_004615, intron 1 of 7) intron (NM_004615, intron 1 of 7) 50894 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chrX-1775 chrX 69517963 69518173 + 6.48 0.000 intron (NM_015686, intron 1 of 2) intron (NM_015686, intron 1 of 2) 12833 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr12-8156 chr12 121287292 121287502 + 6.48 0.000 intron (NM_172215, intron 1 of 15) intron (NM_172215, intron 1 of 15) 9312 NM_001270485 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr11-10340 chr11 110184338 110184548 + 6.48 0.000 intron (NM_001260493, intron 15 of 15) MLT1J2|LTR|ERVL-MaLR 91051 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr9-8880 chr9 136197738 136197948 + 6.48 0.000 intron (NM_001363746, intron 5 of 5) intron (NM_001363746, intron 5 of 5) 3831 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr17-4824 chr17 56941635 56941845 + 6.48 0.000 intron (NM_004645, intron 6 of 6) L1ME3A|LINE|L1 19310 NM_004645 8161 Hs.532795 NM_004645 ENSG00000121058 COIL CLN80|p80-coilin coilin protein-coding chr19-5360 chr19 6151877 6152087 + 6.48 0.000 intron (NM_001289180, intron 5 of 14) intron (NM_001289180, intron 5 of 14) 16315 NM_001289178 81616 Hs.465720 NM_030924 ENSG00000130377 ACSBG2 BGR|BRGL|PRTD-NY3|PRTDNY3 acyl-CoA synthetase bubblegum family member 2 protein-coding chr8-3018 chr8 123490471 123490681 + 6.48 0.000 Intergenic Intergenic 41567 NM_148177 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr2-11737 chr2 10940871 10941081 + 6.48 0.000 Intergenic Intergenic 29042 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr2-12578 chr2 70201831 70202041 + 6.48 0.000 Intergenic HERVL18-int|LTR|ERVL -10917 NM_001348761 54980 Hs.720049 NM_017880 ENSG00000115998 C2orf42 - chromosome 2 open reading frame 42 protein-coding chr3-8602 chr3 164247610 164247820 + 6.48 0.000 Intergenic Intergenic -76159 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr5-6973 chr5 145992101 145992311 + 6.48 0.000 intron (NM_152550, intron 2 of 9) AluJb|SINE|Alu 55628 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr9-5702 chr9 124482772 124482982 + 6.48 0.000 exon (NM_004959, exon 7 of 7) exon (NM_004959, exon 7 of 7) 24522 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr6-3804 chr6 27687509 27687719 + 6.48 0.000 Intergenic CpG -6421 NR_038293 100507173 Hs.635987 NR_038292 ENSG00000281706 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA chr11-9646 chr11 66655461 66655671 + 6.48 0.000 intron (NM_001198844, intron 2 of 2) AluJb|SINE|Alu 16863 NM_001198844 5936 Hs.523822 NM_002896 ENSG00000173933 RBM4 LARK|RBM4A|ZCCHC21|ZCRB3A RNA binding motif protein 4 protein-coding chr20-2990 chr20 41046219 41046429 + 6.48 0.000 intron (NM_003286, intron 2 of 20) MIRc|SINE|MIR 17502 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr14-2875 chr14 33754400 33754610 + 6.48 0.000 intron (NM_001165893, intron 6 of 10) intron (NM_001165893, intron 6 of 10) 45568 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr5-5405 chr5 135576284 135576494 + 6.48 0.000 intron (NM_004887, intron 2 of 3) intron (NM_004887, intron 2 of 3) -2776 NM_001349335 153328 Hs.412418 NM_145282 ENSG00000145832 SLC25A48 - solute carrier family 25 member 48 protein-coding chr22-2641 chr22 33936418 33936628 + 6.48 0.000 Intergenic Intergenic -13635 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr10-2272 chr10 132243875 132244085 + 6.48 0.000 intron (NM_001318878, intron 2 of 11) intron (NM_001318878, intron 2 of 11) 5128 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr12-6176 chr12 13464901 13465111 + 6.48 0.000 Intergenic Intergenic -88261 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr6-5563 chr6 2197565 2197775 + 6.48 0.000 intron (NM_001500, intron 1 of 10) intron (NM_001500, intron 1 of 10) -21679 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr7-7094 chr7 157843841 157844051 + 6.48 0.000 intron (NM_130843, intron 11 of 21) intron (NM_130843, intron 11 of 21) -10639 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chrX-4433 chrX 54536566 54536776 + 6.48 0.000 intron (NM_019067, intron 2 of 15) AluSz6|SINE|Alu 6452 NM_001184819 54552 Hs.654677 NM_019067 ENSG00000130119 GNL3L GNL3B G protein nucleolar 3 like protein-coding chrX-5259 chrX 138636648 138636858 + 6.48 0.000 intron (NM_033642, intron 3 of 4) intron (NM_033642, intron 3 of 4) 31040 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr22-4032 chr22 41182942 41183152 + 6.48 0.000 Intergenic MIRb|SINE|MIR 14454 NR_110514 101927279 Hs.517517 NR_110514 EP300-AS1 - EP300 antisense RNA 1 ncRNA chr5-8402 chr5 126539178 126539388 + 6.48 0.000 Intergenic Intergenic 55936 NM_001202404 501 Hs.483239 NM_001182 ENSG00000164904 ALDH7A1 ATQ1|EPD|PDE aldehyde dehydrogenase 7 family member A1 protein-coding chr7-5551 chr7 45866208 45866418 + 6.48 0.000 Intergenic Intergenic -22175 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding chr2-12339 chr2 48855750 48855960 + 6.48 0.000 Intergenic Intergenic -100131 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr12-8162 chr12 121479774 121479984 + 6.48 0.000 intron (NM_001005366, intron 12 of 22) AluSz|SINE|Alu -35527 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr9-4051 chr9 102897324 102897534 + 6.48 0.000 Intergenic L1P3|LINE|L1 -97904 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr12-6059 chr12 113089885 113090095 + 6.48 0.000 intron (NM_004416, intron 2 of 8) intron (NM_004416, intron 2 of 8) 32133 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 RNF140|hDx-1 deltex E3 ubiquitin ligase 1 protein-coding chr4-5257 chr4 171895056 171895266 + 6.48 0.000 intron (NM_001034845, intron 2 of 12) L1ME1|LINE|L1 -81554 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr15-3586 chr15 51577125 51577335 + 6.48 0.000 intron (NM_001174116, intron 1 of 42) intron (NM_001174116, intron 1 of 42) 45541 NM_001174116 23312 Hs.511386 NM_015263 ENSG00000104093 DMXL2 DFNA71|PEPNS|RC3 Dmx like 2 protein-coding chr5-7449 chr5 31703953 31704163 + 6.48 0.000 intron (NM_178140, intron 1 of 24) AluJb|SINE|Alu 64927 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr4-5265 chr4 173025097 173025307 + 6.48 0.000 intron (NM_001034845, intron 12 of 12) intron (NM_001034845, intron 12 of 12) -143609 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chrX-4089 chrX 23396311 23396521 + 6.48 0.000 3' UTR (NM_173495, exon 3 of 3) 3' UTR (NM_173495, exon 3 of 3) 61567 NM_173495 139411 Hs.319503 NM_173495 ENSG00000165186 PTCHD1 AUTSX4 patched domain containing 1 protein-coding chr2-7554 chr2 23861776 23861986 + 6.48 0.000 intron (NR_125717, intron 12 of 28) intron (NR_125717, intron 12 of 28) 65242 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr10-3175 chr10 86161668 86161878 + 6.48 0.000 intron (NM_017551, intron 3 of 15) intron (NM_017551, intron 3 of 15) 103015 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr2-14451 chr2 223262673 223262883 + 6.48 0.000 Intergenic Intergenic 210848 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr6-3709 chr6 168599374 168599584 + 6.48 0.000 intron (NM_001166412, intron 8 of 12) (AC)n|Simple_repeat|Simple_repeat 158295 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr17-2785 chr17 3738473 3738683 + 6.48 0.000 intron (NM_002208, intron 20 of 30) MER3|DNA|hAT-Charlie 14675 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr5-7628 chr5 50482682 50482892 + 6.48 0.000 Intergenic MER45B|DNA|hAT-Tip100 -41499 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr3-8100 chr3 15196269 15196479 + 6.48 0.000 intron (NR_027927, intron 1 of 4) intron (NR_027927, intron 1 of 4) 9585 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen type VI alpha 4 pseudogene 1 pseudo chr18-1659 chr18 61918046 61918256 + 6.48 0.000 Intergenic Intergenic -25144 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chrX-2042 chrX 17403296 17403506 + 6.48 0.000 intron (NM_198270, intron 1 of 7) L2c|LINE|L2 -22480 NR_039925 100616249 NR_039925 ENSG00000265465 MIR4768 - microRNA 4768 ncRNA chr1-15975 chr1 193841704 193841914 + 6.48 0.000 Intergenic MSTD|LTR|ERVL-MaLR 537064 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr14-5038 chr14 79980651 79980861 + 6.48 0.000 Intergenic MIRc|SINE|MIR -230663 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chr8-6597 chr8 73079227 73079437 + 6.48 0.000 intron (NM_153225, intron 2 of 4) LTR55|LTR|ERVL? 13840 NM_153225 157869 Hs.439040 NM_153225 ENSG00000164764 SBSPON C8orf84|RPESP somatomedin B and thrombospondin type 1 domain containing protein-coding chr11-6278 chr11 59574559 59574769 + 6.48 0.000 3' UTR (NM_002556, exon 14 of 14) 3' UTR (NM_002556, exon 14 of 14) 20494 NR_036120 100422880 NR_036120 ENSG00000264559 MIR3162 mir-3162 microRNA 3162 ncRNA chr11-8553 chr11 132738333 132738543 + 6.48 0.000 intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 205199 NM_002545 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chrX-2665 chrX 115275192 115275402 + 6.48 0.000 Intergenic Intergenic -14418 NM_001318840 51213 Hs.242183 NM_016383 ENSG00000102021 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding chr19-4857 chr19 39087642 39087852 + 6.48 0.000 intron (NM_001363687, intron 2 of 10) AluSz|SINE|Alu 3379 NM_001363687 390928 Hs.448934 NM_001004318 ENSG00000183760 ACP7 PAPL|PAPL1 acid phosphatase 7, tartrate resistant (putative) protein-coding chr4-3505 chr4 145567186 145567396 + 6.48 0.000 Intergenic L1PREC2|LINE|L1 -50097 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA chr7-8877 chr7 91112568 91112778 + 6.48 0.000 exon (NM_001287137, exon 11 of 13) exon (NM_001287137, exon 11 of 13) -151760 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr6-7462 chr6 56613214 56613424 + 6.48 0.000 intron (NM_001144770, intron 34 of 94) intron (NM_001144770, intron 34 of 94) 29570 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr13-3425 chr13 99898524 99898734 + 6.48 0.000 intron (NR_104592, intron 8 of 9) intron (NR_104592, intron 8 of 9) 58536 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr2-13677 chr2 163771229 163771439 + 6.48 0.000 Intergenic Intergenic -35326 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr20-3465 chr20 55522908 55523118 + 6.48 0.000 Intergenic L1PA10|LINE|L1 -95816 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA chr9-3996 chr9 19958191 19958401 + 6.48 0.000 Intergenic Intergenic -171277 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr1-11934 chr1 62863675 62863885 + 6.48 0.000 intron (NM_178221, intron 10 of 10) intron (NM_178221, intron 10 of 10) 79648 NM_032852 84938 Hs.7353 NM_032852 ENSG00000125703 ATG4C APG4-C|APG4C|AUTL1|AUTL3 autophagy related 4C cysteine peptidase protein-coding chr4-3954 chr4 177289333 177289543 + 6.48 0.000 Intergenic LTR17|LTR|ERV1 -20436 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr5-6109 chr5 24553891 24554101 + 6.48 0.000 intron (NM_001362460, intron 2 of 9) intron (NM_001362460, intron 2 of 9) 90982 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr6-4099 chr6 150313092 150313302 + 6.48 0.000 Intergenic Intergenic -55815 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr9-8817 chr9 134895490 134895700 + 6.48 0.000 Intergenic MLT1J2-int|LTR|ERVL-MaLR 14783 NM_015837 2220 Hs.54517 NM_004108 ENSG00000160339 FCN2 EBP-37|FCNL|P35|ficolin-2 ficolin 2 protein-coding chr13-4358 chr13 104536522 104536732 + 6.48 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -929240 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr12-6311 chr12 52670054 52670264 + 6.48 0.000 Intergenic AluSq2|SINE|Alu 10248 NM_006121 3848 Hs.80828 NM_006121 ENSG00000167768 KRT1 CK1|EHK|EHK1|EPPK|K1|KRT1A|NEPPK keratin 1 protein-coding chr3-4892 chr3 180548450 180548660 + 6.48 0.000 Intergenic LTR57-int|LTR|ERVL -53608 NM_001288582 151613 Hs.43213 NM_133462 ENSG00000163728 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding chr5-8021 chr5 88513585 88513795 + 6.48 0.000 Intergenic Intergenic -74600 NR_105021 102546226 Hs.535810 NR_105021 ENSG00000250156 LINC02060 - long intergenic non-protein coding RNA 2060 ncRNA chr3-7118 chr3 183534216 183534426 + 6.48 0.000 intron (NM_130446, intron 1 of 6) intron (NM_130446, intron 1 of 6) -14414 NR_046687 100874019 NR_046687 ENSG00000242522 KLHL6-AS1 - KLHL6 antisense RNA 1 ncRNA chr7-7636 chr7 139218948 139219158 + 6.48 0.000 Intergenic AluSx|SINE|Alu -12184 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr2-10848 chr2 59735896 59736106 + 6.48 0.000 Intergenic Intergenic 518293 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chrX-4668 chrX 82358519 82358729 + 6.48 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -1149666 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr11-7864 chr11 119663300 119663510 + 6.48 0.000 3' UTR (NM_002855, exon 6 of 6) 3' UTR (NM_002855, exon 6 of 6) 65795 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr5-7430 chr5 29403366 29403576 + 6.48 0.000 Intergenic L1M1|LINE|L1 -7495 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA chr7-5615 chr7 52302668 52302878 + 6.48 0.000 Intergenic LTR12C|LTR|ERV1 -732860 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr1-15333 chr1 119749591 119749801 + 6.48 0.000 intron (NM_005518, intron 9 of 9) intron (NM_005518, intron 9 of 9) 19236 NM_001166107 3158 Hs.59889 NM_005518 ENSG00000134240 HMGCS2 - 3-hydroxy-3-methylglutaryl-CoA synthase 2 protein-coding chr9-8613 chr9 128578504 128578714 + 6.48 0.000 intron (NM_003127, intron 9 of 55) AluSc|SINE|Alu 26022 NM_001363759 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr11-5825 chr11 8177235 8177445 + 6.48 0.000 Intergenic Intergenic -8315 NM_001346694 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr10-7782 chr10 35442456 35442666 + 6.48 0.000 intron (NM_001282853, intron 2 of 10) L2c|LINE|L2 105687 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr2-8611 chr2 141448603 141448813 + 6.48 0.000 intron (NM_018557, intron 3 of 90) L1PA7|LINE|L1 682993 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr1-7992 chr1 206117060 206117270 + 6.48 0.000 5' UTR (NM_000707, exon 1 of 2) 5' UTR (NM_000707, exon 1 of 2) 223 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr5-8606 chr5 138597611 138597821 + 6.48 0.000 Intergenic LTR16A1|LTR|ERVL -22315 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr14-4315 chr14 21804645 21804855 + 6.48 0.000 Intergenic Intergenic -133733 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr1-10605 chr1 177366419 177366629 + 6.48 0.000 TTS (NR_126001) TTS (NR_126001) 14938 NR_126001 102724661 Hs.146628 NR_126001 LINC01645 - long intergenic non-protein coding RNA 1645 ncRNA chr2-10625 chr2 10834169 10834379 + 6.48 0.000 intron (NM_001282705, intron 1 of 13) intron (NM_001282705, intron 1 of 13) -1789 NM_001282704 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr3-8016 chr3 188734904 188735114 + 6.48 0.000 intron (NM_001167672, intron 6 of 9) intron (NM_001167672, intron 6 of 9) 46228 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr4-4683 chr4 85862020 85862230 + 6.48 0.000 intron (NM_001287805, intron 1 of 7) intron (NM_001287805, intron 1 of 7) 34188 NM_001287805 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr15-4807 chr15 72852428 72852638 + 6.48 0.000 Intergenic Intergenic -68775 NM_001365223 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr7-8688 chr7 73865748 73865958 + 6.48 0.000 TTS (NM_182504) TTS (NM_182504) 4694 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr2-7688 chr2 30764373 30764583 + 6.48 0.000 intron (NM_144575, intron 5 of 22) intron (NM_144575, intron 5 of 22) 42968 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr7-6951 chr7 97555793 97556003 + 6.48 0.000 Intergenic Intergenic -176188 NM_013997 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding chrX-3418 chrX 12641979 12642189 + 6.48 0.000 intron (NM_001368400, intron 3 of 15) L2b|LINE|L2 143404 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr3-9962 chr3 95240769 95240979 + 6.48 0.000 Intergenic LTR1F|LTR|ERV1 302611 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr11-9222 chr11 40024089 40024299 + 6.48 0.000 Intergenic Intergenic 268936 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr10-7504 chr10 12794730 12794940 + 6.48 0.000 intron (NM_001351032, intron 8 of 11) intron (NM_001351032, intron 8 of 11) -69482 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr9-6468 chr9 89681090 89681300 + 6.48 0.000 intron (NR_024280, intron 3 of 5) LTR12C|LTR|ERV1 41412 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr18-2993 chr18 24413238 24413448 + 6.48 0.000 Intergenic LTR33|LTR|ERVL -13327 NM_018439 55364 Hs.515317 NM_018439 ENSG00000154059 IMPACT RWDD5 impact RWD domain protein protein-coding chr22-3829 chr22 31378239 31378449 + 6.48 0.000 Intergenic L1MEc|LINE|L1 -21260 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chr1-12021 chr1 101850309 101850519 + 6.48 0.000 intron (NM_058170, intron 1 of 5) (TAAA)n|Simple_repeat|Simple_repeat -3334 NR_110212 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr12-7680 chr12 88222308 88222518 + 6.48 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 80106 NR_159381 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding chr17-7554 chr17 19011418 19011628 + 6.48 0.000 intron (NM_001270649, intron 9 of 13) intron (NM_001270649, intron 9 of 13) -6759 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr9-7541 chr9 34781832 34782042 + 6.48 0.000 Intergenic Intergenic -52449 NM_001141917 259308 Hs.522093 NM_001141917 ENSG00000205108 FAM205A C9orf144B family with sequence similarity 205 member A protein-coding chr20-3065 chr20 7382819 7383029 + 6.48 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 11316 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chrX-2015 chrX 15468126 15468336 + 6.48 0.000 intron (NM_001018109, intron 3 of 9) intron (NM_001018109, intron 3 of 9) 23078 NR_037859 100532742 Hs.495728 NR_037859 PIR-FIGF - PIR-FIGF readthrough ncRNA chr9-2973 chr9 20621645 20621855 + 6.48 0.000 intron (NM_004529, intron 1 of 10) CpG-28132 188 NM_001286691 4300 Hs.317248 NM_004529 ENSG00000171843 MLLT3 AF9|YEATS3 MLLT3 super elongation complex subunit protein-coding chr10-8574 chr10 95446315 95446525 + 6.48 0.000 intron (NM_001290295, intron 2 of 24) intron (NM_001290295, intron 2 of 24) -5240 NM_001034954 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding GL000216.2-20 GL000216.2 150139 150349 + 6.48 0.000 NA NA NA NA chr1-15534 chr1 157260266 157260476 + 6.48 0.000 Intergenic MER21-int|LTR|ERVL -121780 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr11-8552 chr11 132731958 132732168 + 6.48 0.000 intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 211574 NM_002545 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr20-4156 chr20 44218806 44219016 + 6.48 0.000 intron (NR_038337, intron 2 of 2) intron (NR_038337, intron 2 of 2) 7825 NR_038337 100505783 Hs.159049 NR_038337 ENSG00000223891 OSER1-DT OSER1-AS1 OSER1 divergent transcript ncRNA chr6-5716 chr6 138691723 138691933 + 6.48 0.000 non-coding (NR_033896, exon 1 of 4) non-coding (NR_033896, exon 1 of 4) 160 NR_033896 441172 Hs.92290 NR_033896 FLJ46906 - uncharacterized LOC441172 ncRNA chr19-6016 chr19 1674627 1674837 + 6.48 0.000 Intergenic Intergenic -22117 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr12-6810 chr12 12006934 12007144 + 6.48 0.000 Intergenic AluSz|SINE|Alu -42822 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr22-3141 chr22 24214839 24215049 + 6.48 0.000 Intergenic Intergenic 30198 NM_001099782 2687 Hs.437156 NM_004121 ENSG00000099998 GGT5 GGL|GGT 5|GGT-REL|GGTLA1 gamma-glutamyltransferase 5 protein-coding chr10-8153 chr10 70892186 70892396 + 6.48 0.000 Intergenic L1M5|LINE|L1 -3726 NM_001323004 5092 Hs.3192 NM_000281 ENSG00000166228 PCBD1 DCOH|PCBD|PCD|PHS pterin-4 alpha-carbinolamine dehydratase 1 protein-coding chr3-9905 chr3 85482219 85482429 + 6.48 0.000 intron (NM_001167674, intron 1 of 9) intron (NM_001167674, intron 1 of 9) -22735 NM_001256502 253559 Hs.164578 NM_153184 ENSG00000175161 CADM2 IGSF4D|NECL3|Necl-3|SynCAM 2|synCAM2 cell adhesion molecule 2 protein-coding chr18-3398 chr18 61259852 61260062 + 6.48 0.000 Intergenic MER50B|LTR|ERV1 -73473 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr4-6278 chr4 79638700 79638910 + 6.48 0.000 Intergenic Intergenic 146212 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr14-4005 chr14 38867735 38867945 + 6.48 0.000 intron (NR_039982, intron 2 of 4) intron (NR_039982, intron 2 of 4) -14756 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr1-12514 chr1 22684809 22685019 + 6.48 0.000 Intergenic Intergenic -25924 NM_017449 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr8-1756 chr8 30137204 30137414 + 6.48 0.000 exon (NM_001128208, exon 4 of 4) exon (NM_001128208, exon 4 of 4) 7356 NM_001100916 619373 Hs.627194 NM_001100916 ENSG00000177669 MBOAT4 FKSG89|GOAT|OACT4 membrane bound O-acyltransferase domain containing 4 protein-coding chr3-7383 chr3 73134233 73134443 + 6.48 0.000 Intergenic Intergenic 72679 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr3-6495 chr3 112061511 112061721 + 6.48 0.000 intron (NR_026734, intron 9 of 16) MIR|SINE|MIR 18638 NM_001366279 344805 Hs.435490 NM_001042575 ENSG00000176040 TMPRSS7 - transmembrane serine protease 7 protein-coding chr8-3118 chr8 54817696 54817906 + 6.48 0.000 Intergenic Intergenic 201705 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr1-8829 chr1 2811329 2811539 + 6.48 0.000 Intergenic Intergenic -10566 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr12-4379 chr12 5088422 5088632 + 6.48 0.000 Intergenic Intergenic 44648 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr3-7197 chr3 190183283 190183493 + 6.48 0.000 Intergenic Intergenic -60951 NM_001134418 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr11-7287 chr11 42573742 42573952 + 6.48 0.000 Intergenic (TGTT)n|Simple_repeat|Simple_repeat -320157 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr8-6693 chr8 82818359 82818569 + 6.48 0.000 Intergenic L1MA4|LINE|L1 -93640 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr4-8601 chr4 170378178 170378388 + 6.48 0.000 Intergenic L1PA15-16|LINE|L1 151692 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chr2-8750 chr2 161617944 161618154 + 6.48 0.000 Intergenic L2c|LINE|L2 -6286 NM_001178016 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr14-4811 chr14 67734646 67734856 + 6.48 0.000 TTS (NM_152443) TTS (NM_152443) 32865 NM_152443 145226 Hs.415322 NM_152443 ENSG00000139988 RDH12 LCA13|RP53|SDR7C2 retinol dehydrogenase 12 protein-coding chr10-6391 chr10 3805887 3806097 + 6.48 0.000 Intergenic Intergenic -20711 NM_001160125 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr10-5884 chr10 117075085 117075295 + 6.48 0.000 intron (NM_001258300, intron 1 of 17) Tigger20a|DNA|TcMar-Tigger 51396 NM_001258300 57698 Hs.501140 NM_018330 ENSG00000187164 SHTN1 KIAA1598|shootin-1 shootin 1 protein-coding chr17-6601 chr17 55374527 55374737 + 6.48 0.000 Intergenic AluSg7|SINE|Alu 47203 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr10-9124 chr10 127459843 127460053 + 6.48 0.000 Intergenic Intergenic -89401 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr3-7959 chr3 167980740 167980950 + 6.48 0.000 Intergenic Intergenic 84897 NR_145443 646168 Hs.390443 NR_033843 ENSG00000244227 LRRC77P LINC01330 leucine rich repeat containing 77, pseudogene pseudo chr1-11800 chr1 26349201 26349411 + 6.48 0.000 intron (NM_001039775, intron 1 of 19) MIRc|SINE|MIR 4824 NM_001039775 55057 Hs.128738 NM_017977 ENSG00000176092 CRYBG2 AIM1L crystallin beta-gamma domain containing 2 protein-coding chr3-9657 chr3 61163283 61163493 + 6.48 0.000 intron (NR_148922, intron 2 of 3) L2c|LINE|L2 88064 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr4-8275 chr4 141541915 141542125 + 6.48 0.000 Intergenic Intergenic -94563 NM_000585 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr9-4482 chr9 34599606 34599816 + 6.48 0.000 Intergenic Intergenic -9571 NM_001207011 1271 Hs.129966 NM_001842 ENSG00000122756 CNTFR - ciliary neurotrophic factor receptor protein-coding chr3-4755 chr3 98923001 98923211 + 6.48 0.000 Intergenic Intergenic -21411 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr1-12686 chr1 48725557 48725767 + 6.48 0.000 intron (NR_136623, intron 5 of 12) MIRb|SINE|MIR 51229 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr11-8690 chr11 4817800 4818010 + 6.48 0.000 Intergenic Intergenic -3416 NM_001004753 119694 Hs.553562 NM_001004753 ENSG00000176925 OR51F2 OR11-23 olfactory receptor family 51 subfamily F member 2 protein-coding chrX-1531 chrX 30822655 30822865 + 6.48 0.000 Intergenic Intergenic -11863 NR_145449 727682 NR_145449 TAB3-AS1 CXorf29 TAB3 antisense RNA 1 ncRNA chr11-9128 chr11 33621082 33621292 + 6.48 0.000 intron (NM_012194, intron 16 of 20) A-rich|Low_complexity|Low_complexity 79553 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr7-2538 chr7 73702952 73703162 + 6.48 0.000 intron (NM_001165903, intron 7 of 9) intron (NM_001165903, intron 7 of 9) -8260 NR_036247 100422948 NR_036247 ENSG00000265724 MIR4284 mir-4284 microRNA 4284 ncRNA chr11-8460 chr11 116361331 116361541 + 6.48 0.000 Intergenic Intergenic -277986 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr15-4888 chr15 76256731 76256941 + 6.48 0.000 intron (NM_000126, intron 9 of 11) Tigger3a|DNA|TcMar-Tigger 3316 NR_028510 7302 Hs.684881 NR_002721 TYRO3P - TYRO3P protein tyrosine kinase pseudogene pseudo chr15-2034 chr15 51401845 51402055 + 6.48 0.000 intron (NM_001330297, intron 9 of 9) intron (NM_001330297, intron 9 of 9) 24704 NM_001330297 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr9-4899 chr9 6714397 6714607 + 6.48 0.000 Intergenic MIR|SINE|MIR -6361 NM_001146696 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr14-1849 chr14 67423234 67423444 + 6.48 0.000 Intergenic L2c|LINE|L2 -11174 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr3-10907 chr3 171614639 171614849 + 6.48 0.000 intron (NM_002662, intron 24 of 26) intron (NM_002662, intron 24 of 26) -154336 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr3-4868 chr3 167741060 167741270 + 6.48 0.000 intron (NM_005025, intron 1 of 8) intron (NM_005025, intron 1 of 8) 5442 NM_005025 5274 Hs.478153 NM_005025 ENSG00000163536 SERPINI1 PI12|neuroserpin serpin family I member 1 protein-coding chr14-4509 chr14 38399445 38399655 + 6.48 0.000 Intergenic Intergenic -143457 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr15-3643 chr15 81182639 81182849 + 6.48 0.000 Intergenic Intergenic -14135 NM_001352685 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding chr1-14507 chr1 50439066 50439276 + 6.48 0.000 3' UTR (NM_007051, exon 19 of 19) 3' UTR (NM_007051, exon 19 of 19) -15728 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr5-6388 chr5 141570534 141570744 + 6.48 0.000 intron (NM_005219, intron 17 of 27) intron (NM_005219, intron 17 of 27) 12328 NR_038333 100505658 Hs.655458 NR_038333 ENSG00000246422 LOC100505658 - uncharacterized LOC100505658 ncRNA chr17-6949 chr17 43601248 43601458 + 6.48 0.000 Intergenic Intergenic -55013 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr21-1470 chr21 34910311 34910521 + 6.48 0.000 intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) -21717 NM_001122607 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr5-3108 chr5 53099599 53099809 + 6.48 0.000 intron (NM_004531, intron 6 of 6) intron (NM_004531, intron 6 of 6) 10053 NM_176806 4338 Hs.163645 NM_004531 ENSG00000164172 MOCS2 MCBPE|MOCO1|MOCODB|MPTS molybdenum cofactor synthesis 2 protein-coding chr11-7954 chr11 6022246 6022456 + 6.48 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 5390 NM_001001917 120796 Hs.553543 NM_001001917 ENSG00000180934 OR56A1 OR11-75 olfactory receptor family 56 subfamily A member 1 protein-coding chr5-5915 chr5 53767656 53767866 + 6.48 0.000 Intergenic Intergenic 51921 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr2-13791 chr2 172976956 172977166 + 6.48 0.000 intron (NM_001282901, intron 4 of 24) intron (NM_001282901, intron 4 of 24) 48856 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr1-12702 chr1 53067948 53068158 + 6.48 0.000 intron (NM_001199080, intron 3 of 12) intron (NM_001199080, intron 3 of 12) 5840 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr5-8070 chr5 94895617 94895827 + 6.48 0.000 intron (NM_001297777, intron 8 of 19) intron (NM_001297777, intron 8 of 19) 186144 NM_001002796 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr14-2607 chr14 56399815 56400025 + 6.48 0.000 Intergenic MER65B|LTR|ERV1 -114411 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr7-5281 chr7 22886001 22886211 + 6.48 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 29493 NR_003075 692210 NR_003075 ENSG00000221740 SNORD93 HBII-336 small nucleolar RNA, C/D box 93 snoRNA chr17-5340 chr17 28967525 28967735 + 6.48 0.000 intron (NM_001290202, intron 4 of 16) MIRb|SINE|MIR -16112 NM_001290131 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr7-2711 chr7 30727272 30727482 + 6.48 0.000 Intergenic Intergenic -24758 NR_037598 100526825 Hs.660192 NR_037598 ENSG00000254959 INMT-MINDY4 INMT-FAM188B INMT-MINDY4 readthrough (NMD candidate) ncRNA chr15-4190 chr15 101432395 101432605 + 6.48 0.000 intron (NM_138325, intron 2 of 13) AluJb|SINE|Alu 57207 NM_002570 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr22-3311 chr22 18955644 18955854 + 6.48 0.000 Intergenic Intergenic -14749 NR_045121 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr4-8025 chr4 118729505 118729715 + 6.48 0.000 intron (NM_014822, intron 21 of 22) intron (NM_014822, intron 21 of 22) 44218 NM_020961 57721 Hs.596872 NM_020961 ENSG00000145388 METTL14 hMETTL14 methyltransferase like 14 protein-coding chr9-7998 chr9 93915470 93915680 + 6.48 0.000 Intergenic L3|LINE|CR1 39780 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr18-350 chr18 4510787 4510997 + 6.48 0.000 Intergenic (GTG)n|Simple_repeat|Simple_repeat -55585 NM_004746 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr7-4681 chr7 40220112 40220322 + 6.48 0.000 intron (NM_024728, intron 6 of 14) intron (NM_024728, intron 6 of 14) 85241 NM_001193312 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding chr3-3223 chr3 3497005 3497215 + 6.48 0.000 Intergenic AluSz|SINE|Alu -302321 NM_001324189 57633 Hs.163244 NM_020873 ENSG00000175928 LRRN1 FIGLER3|NLRR-1 leucine rich repeat neuronal 1 protein-coding chr9-4182 chr9 26501913 26502123 + 6.48 0.000 Intergenic Intergenic 390784 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr1-8722 chr1 230426288 230426498 + 6.48 0.000 promoter-TSS (NM_001258311) promoter-TSS (NM_001258311) -61 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr1-6440 chr1 16396724 16396934 + 6.48 0.000 non-coding (NR_073500, exon 2 of 2) non-coding (NR_073500, exon 2 of 2) 29587 NR_073501 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr6-6473 chr6 110472285 110472495 + 6.48 0.000 intron (NM_033125, intron 1 of 7) intron (NM_033125, intron 1 of 7) 4223 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr5-6794 chr5 94620935 94621145 + 6.48 0.000 intron (NM_032290, intron 1 of 20) intron (NM_032290, intron 1 of 20) 2371 NM_032290 84250 Hs.657315 NM_032290 ENSG00000133302 SLF1 ANKRD32|BRCTD1|BRCTx SMC5-SMC6 complex localization factor 1 protein-coding chr2-7724 chr2 35669553 35669763 + 6.48 0.000 Intergenic MLT2A2|LTR|ERVL 198253 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr16-6784 chr16 77647232 77647442 + 6.48 0.000 Intergenic Intergenic -75155 NM_001243661 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr12-2755 chr12 47413903 47414113 + 6.48 0.000 promoter-TSS (NR_149087) promoter-TSS (NR_149087) -1000 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr2-6441 chr2 155131912 155132122 + 6.48 0.000 Intergenic AluJb|SINE|Alu 433322 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr3-7687 chr3 43783381 43783591 + 6.48 0.000 Intergenic Intergenic -91892 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr11-8357 chr11 81213903 81214113 + 6.48 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -451205 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chrX-3142 chrX 17109290 17109500 + 6.48 0.000 intron (NM_001080975, intron 14 of 17) L2|LINE|L2 162737 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr12-5547 chr12 133225825 133226035 + 6.48 0.000 intron (NM_001191054, intron 6 of 8) intron (NM_001191054, intron 6 of 8) 9906 NM_001191054 647589 Hs.703008 NM_001191054 ENSG00000227059 ANHX - anomalous homeobox protein-coding chr5-5795 chr5 175441528 175441738 + 6.48 0.000 3' UTR (NM_000794, exon 2 of 2) 3' UTR (NM_000794, exon 2 of 2) 2549 NM_000794 1812 Hs.2624 NM_000794 ENSG00000184845 DRD1 DADR|DRD1A dopamine receptor D1 protein-coding chr11-6034 chr11 27158869 27159079 + 6.48 0.000 intron (NR_125767, intron 2 of 4) intron (NR_125767, intron 2 of 4) 59794 NR_125768 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr19-4144 chr19 30275572 30275782 + 6.48 0.000 Intergenic MIR|SINE|MIR -96707 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr1-16447 chr1 227058337 227058547 + 6.48 0.000 intron (NM_003607, intron 21 of 35) intron (NM_003607, intron 21 of 35) 118148 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr12-5894 chr12 56694095 56694305 + 6.48 0.000 Intergenic AluSz6|SINE|Alu -5792 NM_001282604 10728 Hs.50425 NM_006601 ENSG00000110958 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 protein-coding chr2-8233 chr2 96960574 96960784 + 6.48 0.000 intron (NM_001122646, intron 5 of 16) intron (NM_001122646, intron 5 of 16) 25901 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr14-1573 chr14 74853694 74853904 + 6.48 0.000 3' UTR (NM_001080408, exon 3 of 3) 3' UTR (NM_001080408, exon 3 of 3) 10035 NM_001243007 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding chr19-5396 chr19 12752495 12752705 + 6.48 0.000 exon (NM_017682, exon 2 of 10) exon (NM_017682, exon 2 of 10) 809 NM_017682 54831 Hs.435611 NM_017682 ENSG00000039987 BEST2 VMD2L1 bestrophin 2 protein-coding chr2-11006 chr2 102488374 102488584 + 6.48 0.000 intron (NM_001011552, intron 2 of 11) intron (NM_001011552, intron 2 of 11) 15253 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding chr17-6434 chr17 7226414 7226624 + 6.48 0.000 exon (NM_004422, exon 14 of 15) exon (NM_004422, exon 14 of 15) -3140 NR_029896 442898 NR_029896 ENSG00000199053 MIR324 MIRN324|hsa-mir-324|mir-324 microRNA 324 ncRNA chr1-10747 chr1 198991927 198992137 + 6.48 0.000 TTS (NR_110525) TTS (NR_110525) -24101 NR_126351 104266961 Hs.576501 NR_126351 ENSG00000235492 LINC01221 TCONS_00000366 long intergenic non-protein coding RNA 1221 ncRNA chr10-8903 chr10 114626832 114627042 + 6.48 0.000 intron (NM_001322886, intron 1 of 20) MLT1C|LTR|ERVL-MaLR 5460 NM_001352441 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr7-8559 chr7 57342429 57342639 + 6.48 0.000 Intergenic L1PA10|LINE|L1 -62233 NR_120505 100653233 Hs.127379 NR_120505 ENSG00000260653 LOC100653233 - uncharacterized LOC100653233 ncRNA chr11-5705 chr11 1363788 1363998 + 6.48 0.000 Intergenic ERVL-E-int|LTR|ERVL -26041 NR_046331 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr14-5286 chr14 100651702 100651912 + 6.48 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -5461 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chr19-3550 chr19 45386184 45386394 + 6.48 0.000 intron (NM_006663, intron 8 of 12) MIR|SINE|MIR -15702 NM_001130867 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2, TFIIH core complex helicase subunit protein-coding chr22-2748 chr22 39746808 39747018 + 6.48 0.000 intron (NM_152512, intron 6 of 6) HAL1|LINE|L1 146847 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr7-9419 chr7 132528582 132528792 + 6.48 0.000 intron (NM_181775, intron 2 of 4) MLT1L|LTR|ERVL-MaLR 47783 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr10-8483 chr10 89089314 89089524 + 6.48 0.000 Intergenic L1PA15|LINE|L1 -26008 NR_039827 100616192 NR_039827 ENSG00000265375 MIR4679-2 - microRNA 4679-2 ncRNA chr14-3394 chr14 95314955 95315165 + 6.48 0.000 intron (NM_024734, intron 1 of 12) intron (NM_024734, intron 1 of 12) 4848 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr8-6420 chr8 58203420 58203630 + 6.48 0.000 Intergenic Intergenic 68576 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr19-4785 chr19 33458760 33458970 + 6.48 0.000 intron (NM_001166056, intron 7 of 12) (GT)n|Simple_repeat|Simple_repeat 62926 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr3-4211 chr3 133853295 133853505 + 6.48 0.000 intron (NM_001363953, intron 3 of 8) intron (NM_001363953, intron 3 of 8) 42447 NM_001363953 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr10-1878 chr10 101214005 101214215 + 6.48 0.000 Intergenic Intergenic 14850 NM_006562 10660 Hs.37128 NM_006562 ENSG00000138136 LBX1 HPX-6|HPX6|LBX1H|homeobox ladybird homeobox 1 protein-coding chr5-8183 chr5 105113312 105113522 + 6.48 0.000 Intergenic HERVL-int|LTR|ERVL 13943 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr17-8442 chr17 76952236 76952446 + 6.48 0.000 intron (NR_136417, intron 2 of 2) intron (NR_136417, intron 2 of 2) 16858 NR_136416 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr15-1917 chr15 80445315 80445525 + 6.48 0.000 intron (NM_014862, intron 1 of 18) (GT)n|Simple_repeat|Simple_repeat 41038 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr1-9067 chr1 15260812 15261022 + 6.48 0.000 intron (NM_052929, intron 2 of 30) MLT1E2|LTR|ERVL-MaLR 13692 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr11-9203 chr11 37449200 37449410 + 6.48 0.000 Intergenic Intergenic -489296 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr2-6045 chr2 120842836 120843046 + 6.48 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 50660 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr8-5640 chr8 107188235 107188445 + 6.48 0.000 Intergenic MamTip2|DNA|hAT-Tip100 148175 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr6-3548 chr6 44292047 44292257 + 6.48 0.000 intron (NM_182539, intron 1 of 4) L2c|LINE|L2 5546 NM_182539 202500 Hs.189183 NM_182539 ENSG00000146221 TCTE1 D6S46|DRC5|FAP155 t-complex-associated-testis-expressed 1 protein-coding chr5-8999 chr5 164935157 164935367 + 6.48 0.000 Intergenic U6|snRNA|snRNA 464983 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr18-2848 chr18 7933157 7933367 + 6.48 0.000 intron (NM_002845, intron 5 of 30) MER44C|DNA|TcMar-Tigger 365946 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr3-4420 chr3 10524903 10525113 + 6.48 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) -19422 NM_001683 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr3-7689 chr3 45799407 45799617 + 6.48 0.000 Intergenic Intergenic -2976 NM_022405 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr13-3090 chr13 49786657 49786867 + 6.48 0.000 intron (NM_002267, intron 1 of 16) intron (NM_002267, intron 1 of 16) 5920 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr6-5583 chr6 34548691 34548901 + 6.48 0.000 intron (NM_012391, intron 1 of 5) intron (NM_012391, intron 1 of 5) 7533 NM_012391 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr5-5803 chr5 176596030 176596240 + 6.48 0.000 TTS (NM_001171976) TTS (NM_001171976) 14021 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr10-3289 chr10 312298 312508 + 6.48 0.000 intron (NM_014974, intron 31 of 36) intron (NM_014974, intron 31 of 36) 132409 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr20-4292 chr20 50534684 50534894 + 6.48 0.000 intron (NM_001278618, intron 1 of 8) AluJr|SINE|Alu 24406 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr5-7397 chr5 24563950 24564160 + 6.48 0.000 intron (NM_001362460, intron 2 of 9) L1MC4|LINE|L1 80923 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr6-7317 chr6 44537798 44538008 + 6.48 0.000 Intergenic MER51E|LTR|ERV1 13978 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr2-13109 chr2 113295092 113295302 + 6.48 0.000 Intergenic L3|LINE|CR1 -16276 NM_013992 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr1-10879 chr1 205978546 205978756 + 6.48 0.000 TTS (NR_110984) TTS (NR_110984) 15788 NM_177403 338382 Hs.534612 NM_177403 ENSG00000276600 RAB7B RAB7 RAB7B, member RAS oncogene family protein-coding chr9-3643 chr9 92947410 92947620 + 6.48 0.000 promoter-TSS (NM_001083536) promoter-TSS (NM_001083536) -8 NM_001083536 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr15-5195 chr15 94048654 94048864 + 6.48 0.000 intron (NR_120320, intron 2 of 8) intron (NR_120320, intron 2 of 8) 59179 NR_120320 101927112 Hs.134687 NR_120320 ENSG00000259724 LINC01581 - long intergenic non-protein coding RNA 1581 ncRNA chr4-6319 chr4 88417667 88417877 + 6.48 0.000 intron (NM_001165136, intron 13 of 21) intron (NM_001165136, intron 13 of 21) 39033 NM_017912 55008 Hs.529317 NM_017912 ENSG00000138642 HERC6 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 protein-coding chr1-4758 chr1 9054704 9054914 + 6.48 0.000 intron (NM_003039, intron 3 of 11) AluJo|SINE|Alu 14826 NM_001328621 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr9-6002 chr9 134989477 134989687 + 6.48 0.000 Intergenic Intergenic -71670 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr2-4754 chr2 12202739 12202949 + 6.48 0.000 intron (NR_110196, intron 3 of 5) L2b|LINE|L2 3714 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr19-3226 chr19 404995 405205 + 6.48 0.000 TTS (NM_001136263) TTS (NM_001136263) 4047 NM_001136263 126567 Hs.223770 NM_001136263 ENSG00000183186 C2CD4C FAM148C|KIAA1957|NLF3 C2 calcium dependent domain containing 4C protein-coding chr10-4305 chr10 14987067 14987277 + 6.48 0.000 intron (NR_147060, intron 2 of 2) intron (NR_147060, intron 2 of 2) 27784 NM_001080836 644890 Hs.257249 NM_001080836 ENSG00000197889 MEIG1 SPATA39|bA2K17.3 meiosis/spermiogenesis associated 1 protein-coding chr15-1671 chr15 41321145 41321355 + 6.48 0.000 intron (NM_007280, intron 2 of 4) SVA_D|Retroposon|SVA 11341 NM_007280 11339 Hs.661645 NM_007280 ENSG00000104147 OIP5 5730547N13Rik|CT86|LINT-25|MIS18B|MIS18beta|hMIS18beta Opa interacting protein 5 protein-coding chr19-5780 chr19 32220977 32221187 + 6.48 0.000 Intergenic Intergenic -115166 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LINC01782 - long intergenic non-protein coding RNA 1782 ncRNA chr14-4929 chr14 74065357 74065567 + 6.48 0.000 3' UTR (NM_025057, exon 12 of 12) 3' UTR (NM_025057, exon 12 of 12) 18991 NM_001278594 4329 Hs.293970 NM_005589 ENSG00000119711 ALDH6A1 MMSADHA|MMSDH aldehyde dehydrogenase 6 family member A1 protein-coding chr16-2783 chr16 29308695 29308905 + 6.48 0.000 intron (NR_002939, intron 1 of 8) intron (NR_002939, intron 1 of 8) 6513 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr14-2882 chr14 34359763 34359973 + 6.48 0.000 Intergenic MIR|SINE|MIR 102372 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr20-4066 chr20 38331540 38331750 + 6.48 0.000 intron (NM_001725, intron 12 of 14) AluJr4|SINE|Alu -14837 NM_004139 3929 Hs.154078 NM_004139 ENSG00000129988 LBP BPIFD2 lipopolysaccharide binding protein protein-coding chr5-7913 chr5 77322541 77322751 + 6.48 0.000 intron (NM_001029851, intron 2 of 18) L2a|LINE|L2 111966 NM_001029853 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr15-1611 chr15 82108610 82108820 + 6.48 0.000 Intergenic Intergenic 20121 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr6-5457 chr6 158895868 158896078 + 6.48 0.000 intron (NR_160979, intron 2 of 2) AluSx1|SINE|Alu 7496 NR_160979 100130967 Hs.32804 NM_001195032 C6orf99 - chromosome 6 open reading frame 99 ncRNA chr17-8065 chr17 51470338 51470548 + 6.48 0.000 Intergenic Intergenic 35016 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr3-7500 chr3 160200378 160200588 + 6.48 0.000 intron (NR_108088, intron 1 of 9) intron (NR_108088, intron 1 of 9) 6609 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr19-6930 chr19 46447136 46447346 + 6.48 0.000 Intergenic MIR|SINE|MIR 24322 NM_001103149 55228 Hs.8395 NM_018215 ENSG00000182013 PNMA8A PNMAL1 PNMA family member 8A protein-coding chr11-8400 chr11 95462339 95462549 + 6.48 0.000 Intergenic L1ME1|LINE|L1 -229969 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr10-4503 chr10 86346795 86347005 + 6.48 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 19895 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr2-11470 chr2 231768354 231768564 + 6.48 0.000 intron (NM_002601, intron 1 of 4) AluSz|SINE|Alu 12823 NR_110994 5147 Hs.516808 NM_002601 ENSG00000156973 PDE6D JBTS22|PDED phosphodiesterase 6D protein-coding chrX-3329 chrX 128983012 128983222 + 6.48 0.000 Intergenic L1PA13|LINE|L1 540373 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr6-7131 chr6 35747186 35747396 + 6.48 0.000 exon (NM_001286576, exon 4 of 6) exon (NM_001286576, exon 4 of 6) 10259 NM_145028 221481 Hs.533066 NM_145028 ENSG00000157343 ARMC12 C6orf81 armadillo repeat containing 12 protein-coding chr4-4724 chr4 90315212 90315422 + 6.48 0.000 intron (NM_207491, intron 3 of 7) intron (NM_207491, intron 3 of 7) 80286 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr1-12522 chr1 24380025 24380235 + 6.48 0.000 intron (NM_001199013, intron 4 of 8) intron (NM_001199013, intron 4 of 8) -33357 NM_001322854 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chrX-4801 chrX 99984998 99985208 + 6.48 0.000 Intergenic Intergenic 425170 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-6541 chr8 68770712 68770922 + 6.48 0.000 intron (NM_001349479, intron 9 of 11) intron (NM_001349479, intron 9 of 11) 333373 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr2-6005 chr2 80054358 80054568 + 6.48 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -187880 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr1-11355 chr1 32221503 32221713 + 6.48 0.000 promoter-TSS (NM_003757) promoter-TSS (NM_003757) 24 NM_003757 8668 Hs.530096 NM_003757 ENSG00000084623 EIF3I EIF3S2|PRO2242|TRIP-1|TRIP1|eIF3-beta|eIF3-p36 eukaryotic translation initiation factor 3 subunit I protein-coding chr3-8527 chr3 139663959 139664169 + 6.48 0.000 intron (NM_178177, intron 1 of 4) intron (NM_178177, intron 1 of 4) 13908 NM_001320510 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding chr7-3807 chr7 93938131 93938341 + 6.48 0.000 Intergenic Charlie4z|DNA|hAT-Charlie 16501 NM_004126 2791 Hs.83381 NM_004126 ENSG00000127920 GNG11 GNGT11 G protein subunit gamma 11 protein-coding chr21-1974 chr21 46600398 46600608 + 6.48 0.000 intron (NM_006272, intron 2 of 2) AluJb|SINE|Alu 4579 NM_006272 6285 Hs.422181 NM_006272 ENSG00000160307 S100B NEF|S100|S100-B|S100beta S100 calcium binding protein B protein-coding chr2-4121 chr2 158094819 158095029 + 6.48 0.000 intron (NM_001135098, intron 2 of 8) intron (NM_001135098, intron 2 of 8) -6946 NM_173355 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr1-12786 chr1 80646860 80647070 + 6.48 0.000 TTS (NR_125941) TTS (NR_125941) 5678 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr6-8113 chr6 126808711 126808921 + 6.48 0.000 Intergenic Intergenic -309855 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr4-1750 chr4 123317278 123317488 + 6.48 0.000 3' UTR (NM_145207, exon 16 of 16) 3' UTR (NM_145207, exon 16 of 16) -79412 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr5-1754 chr5 180831577 180831787 + 6.48 0.000 promoter-TSS (NR_045680) promoter-TSS (NR_045680) -64 NR_045680 100859930 Hs.655606 NR_045680 ENSG00000278970 HEIH HCCAT2|LINC-HEIH|LINC00848|lncRNA-HEIH hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA ncRNA chrX-4036 chrX 17833269 17833479 + 6.48 0.000 intron (NM_021785, intron 1 of 1) AluSz|SINE|Alu 27453 NR_033348 10742 Hs.446680 NM_021785 ENSG00000131831 RAI2 - retinoic acid induced 2 protein-coding chr16-3864 chr16 68658579 68658789 + 6.48 0.000 intron (NM_001793, intron 2 of 15) intron (NM_001793, intron 2 of 15) 13374 NM_001317195 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr12-4910 chr12 67161355 67161565 + 6.48 0.000 Intergenic Intergenic -65176 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr3-9990 chr3 99466127 99466337 + 6.48 0.000 Intergenic MER21C|LTR|ERVL -172362 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr6-5757 chr6 157733762 157733972 + 6.48 0.000 Intergenic Intergenic -89379 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr6-3342 chr6 18295772 18295982 + 6.48 0.000 Intergenic AluJr|SINE|Alu -31347 NM_001134709 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr13-3868 chr13 51108821 51109031 + 6.48 0.000 intron (NR_102432, intron 1 of 3) intron (NR_102432, intron 1 of 3) 2302 NM_001351589 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr20-4315 chr20 51696836 51697046 + 6.48 0.000 intron (NM_006045, intron 5 of 27) intron (NM_006045, intron 5 of 27) 71449 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr14-2664 chr14 72189968 72190178 + 6.48 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 256546 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chrX-3038 chrX 88090175 88090385 + 6.48 0.000 Intergenic THE1D|LTR|ERVL-MaLR 572478 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr20-2262 chr20 2879290 2879500 + 6.48 0.000 intron (NM_080840, intron 1 of 22) MER5A1|DNA|hAT-Charlie 5899 NM_080840 5786 Hs.269577 NM_002836 ENSG00000132670 PTPRA HEPTP|HLPR|HPTPA|HPTPalpha|LRP|PTPA|PTPRL2|R-PTP-alpha|RPTPA protein tyrosine phosphatase receptor type A protein-coding chr10-5082 chr10 44689413 44689623 + 6.48 0.000 Intergenic Intergenic -221798 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr18-2538 chr18 79870101 79870311 + 6.48 0.000 intron (NM_012283, intron 1 of 1) intron (NM_012283, intron 1 of 1) 6538 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr2-11876 chr2 23202439 23202649 + 6.48 0.000 Intergenic Kanga11a|DNA|TcMar-Tc2 -182635 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2-14263 chr2 214711736 214711946 + 6.48 0.000 Intergenic Intergenic 97842 NM_001282543 580 Hs.591642 NM_000465 ENSG00000138376 BARD1 - BRCA1 associated RING domain 1 protein-coding chr12-7557 chr12 72292691 72292901 + 6.48 0.000 intron (NM_013381, intron 2 of 18) MLT1G-int|LTR|ERVL-MaLR -19287 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr4-5411 chr4 7222602 7222812 + 6.48 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 30169 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr21-1663 chr21 26355579 26355789 + 6.48 0.000 Intergenic MIR3|SINE|MIR -37951 NR_135516 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chr18-3444 chr18 66164149 66164359 + 6.48 0.000 Intergenic L1MDa|LINE|L1 413242 NM_001317214 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr6-7987 chr6 115318933 115319143 + 6.48 0.000 Intergenic Intergenic 324797 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr6-3649 chr6 136263994 136264204 + 6.48 0.000 intron (NM_001363659, intron 10 of 11) MIR|SINE|MIR -13788 NM_138419 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr1-7229 chr1 224333447 224333657 + 6.48 0.000 Intergenic Intergenic -3363 NM_001243146 4931 Hs.497867 NM_002533 ENSG00000143748 NVL NVL2 nuclear VCP like protein-coding chr6-6393 chr6 79735277 79735487 + 6.48 0.000 Intergenic L2c|LINE|L2 76864 NR_131786 89758 Hs.288213 NM_001243308 LINC01621 C6orf7 long intergenic non-protein coding RNA 1621 ncRNA chr7-7972 chr7 13304968 13305178 + 6.48 0.000 Intergenic Intergenic 617440 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr5-8347 chr5 119661278 119661488 + 6.48 0.000 Intergenic Intergenic 31824 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr4-7105 chr4 34138824 34139034 + 6.48 0.000 intron (NR_147184, intron 2 of 3) ERVL-E-int|LTR|ERVL -99036 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr1-13056 chr1 175418644 175418854 + 6.48 0.000 intron (NM_003285, intron 2 of 22) L2c|LINE|L2 -225762 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr12-7760 chr12 94809168 94809378 + 6.48 0.000 Intergenic L2a|LINE|L2 -25125 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr2-7279 chr2 235206058 235206268 + 6.48 0.000 Intergenic Intergenic 178428 NM_001371306 chr18-3381 chr18 59356651 59356861 + 6.48 0.000 intron (NM_005570, intron 1 of 12) MIRc|SINE|MIR 2509 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr20-3948 chr20 33838771 33838981 + 6.48 0.000 intron (NM_176812, intron 1 of 4) intron (NM_176812, intron 1 of 4) 27528 NM_176812 128866 Hs.472471 NM_176812 ENSG00000101421 CHMP4B C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4 charged multivesicular body protein 4B protein-coding chr22-2846 chr22 44482964 44483174 + 6.48 0.000 Intergenic AluSq2|SINE|Alu 15164 NM_032287 84247 Hs.744991 NM_032287 ENSG00000188636 RTL6 LDOC1L|Mar6|Mart6|SIRH3|dJ1033E15.2 retrotransposon Gag like 6 protein-coding chr19-5976 chr19 759974 760184 + 6.48 0.000 intron (NR_135168, intron 2 of 3) intron (NR_135168, intron 2 of 3) 8967 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr5-5490 chr5 140672969 140673179 + 6.48 0.000 TTS (NM_002109) TTS (NM_002109) 502 NM_194249 373863 Hs.591262 NM_194249 ENSG00000256453 DND1 RBMS4 DND microRNA-mediated repression inhibitor 1 protein-coding chr5-6817 chr5 103506132 103506342 + 6.48 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 35748 NR_104670 102467212 Hs.641885 NR_104670 ENSG00000248757 LINC02115 - long intergenic non-protein coding RNA 2115 ncRNA chr4-7236 chr4 44506663 44506873 + 6.48 0.000 Intergenic L1MEc|LINE|L1 -57959 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr12-2340 chr12 4277064 4277274 + 6.48 0.000 promoter-TSS (NR_125790) promoter-TSS (NR_125790) -985 NR_125790 103752584 Hs.577711 NR_125790 ENSG00000255920 CCND2-AS1 CCND2-AS2 CCND2 antisense RNA 1 ncRNA chr1-8280 chr1 39479796 39480006 + 6.48 0.000 exon (NM_012090, exon 91 of 93) exon (NM_012090, exon 91 of 93) -11735 NM_181809 353500 Hs.472497 NM_181809 ENSG00000183682 BMP8A - bone morphogenetic protein 8a protein-coding chr7-8094 chr7 25458636 25458846 + 6.48 0.000 Intergenic L2a|LINE|L2 204399 NR_157828 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr11-5598 chr11 111913134 111913344 + 6.48 0.000 promoter-TSS (NM_001885) promoter-TSS (NM_001885) -26 NM_001289807 1410 Hs.53454 NM_001885 ENSG00000109846 CRYAB CMD1II|CRYA2|CTPP2|CTRCT16|HEL-S-101|HSPB5|MFM2 crystallin alpha B protein-coding chr11-7545 chr11 15911519 15911729 + 6.48 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 57997 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr5-6307 chr5 123709610 123709820 + 6.48 0.000 Intergenic L1MEg|LINE|L1 164298 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr1-10318 chr1 151832167 151832377 + 6.48 0.000 promoter-TSS (NM_005060) promoter-TSS (NM_005060) -470 NM_005060 6097 Hs.256022 NM_005060 ENSG00000143365 RORC IMD42|NR1F3|RORG|RZR-GAMMA|RZRG|TOR RAR related orphan receptor C protein-coding chr11-10705 chr11 130424704 130424914 + 6.48 0.000 intron (NM_007037, intron 1 of 8) intron (NM_007037, intron 1 of 8) 3800 NM_007037 11095 Hs.271605 NM_007037 ENSG00000134917 ADAMTS8 ADAM-TS8|METH2 ADAM metallopeptidase with thrombospondin type 1 motif 8 protein-coding chr12-6660 chr12 1503378 1503588 + 6.48 0.000 non-coding (NR_028415, exon 2 of 2) non-coding (NR_028415, exon 2 of 2) 2992 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr2-10072 chr2 43150213 43150423 + 6.48 0.000 Intergenic MIRb|SINE|MIR -47873 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chr6-8043 chr6 119957241 119957451 + 6.48 0.000 Intergenic L1MA7|LINE|L1 -57833 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr17-7025 chr17 58371104 58371314 + 6.48 0.000 intron (NM_001305544, intron 2 of 9) intron (NM_001305544, intron 2 of 9) -19008 NR_073470 6827 Hs.439481 NM_003168 ENSG00000213246 SUPT4H1 SPT4|SPT4H|SUPT4H|Supt4a SPT4 homolog, DSIF elongation factor subunit protein-coding chr5-4791 chr5 56688078 56688288 + 6.48 0.000 Intergenic MER5B|DNA|hAT-Charlie -81927 NR_161255 101928448 Hs.208052 NM_001287053 ENSG00000225940 C5orf67 - chromosome 5 open reading frame 67 ncRNA chr9-6455 chr9 85925794 85926004 + 6.48 0.000 Intergenic AluSp|SINE|Alu -15243 NM_001321881 60560 Hs.436098 NM_021929 ENSG00000135040 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding chr3-8372 chr3 87647603 87647813 + 6.48 0.000 Intergenic Zaphod|DNA|hAT-Tip100 -144998 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr12-4281 chr12 122148085 122148295 + 6.48 0.000 TTS (NM_014938).2 TTS (NM_014938).2 -19529 NM_152759 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr13-4104 chr13 79237614 79237824 + 6.48 0.000 Intergenic AluJb|SINE|Alu 168502 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr20-3866 chr20 28611390 28611600 + 6.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR -8830 NR_132315 100289097 Hs.529357 NR_132315 ENSG00000282826 FRG1CP - FSHD region gene 1 family member C, pseudogene pseudo chr8-4202 chr8 84871607 84871817 + 6.48 0.000 intron (NM_001287244, intron 5 of 7) intron (NM_001287244, intron 5 of 7) 165785 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr6-4025 chr6 125393572 125393782 + 6.48 0.000 Intergenic Intergenic -91710 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chr14-4161 chr14 77188903 77189113 + 6.48 0.000 intron (NM_020431, intron 1 of 23) intron (NM_020431, intron 1 of 23) 7210 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding chr11-7127 chr11 125390748 125390958 + 6.48 0.000 intron (NM_022062, intron 6 of 12) intron (NM_022062, intron 6 of 12) -104361 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr1-14310 chr1 39420543 39420753 + 6.48 0.000 intron (NM_012090, intron 52 of 92) intron (NM_012090, intron 52 of 92) 11575 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr3-10853 chr3 167380176 167380386 + 6.48 0.000 promoter-TSS (NM_024687) promoter-TSS (NM_024687) 2 NM_001199202 79740 Hs.478143 NM_024687 ENSG00000169064 ZBBX - zinc finger B-box domain containing protein-coding chr6-5521 chr6 166947358 166947568 + 6.48 0.000 intron (NM_003730, intron 3 of 8) intron (NM_003730, intron 3 of 8) 9087 NM_003730 8635 Hs.529989 NM_003730 ENSG00000026297 RNASET2 RNASE6PL|bA514O12.3 ribonuclease T2 protein-coding chr17-5743 chr17 58574511 58574721 + 6.48 0.000 intron (NM_031272, intron 21 of 31) AluSc|SINE|Alu -30288 NM_001038704 5414 Hs.287518 NM_004574 ENSG00000108387 SEPTIN4 ARTS|BRADEION|C17orf47|CE5B3|H5|MART|PNUTL2|SEP4|SEPT4|hCDCREL-2|hucep-7 septin 4 protein-coding chr19-6314 chr19 9925564 9925774 + 6.48 0.000 intron (NM_058164, intron 1 of 5) AluJb|SINE|Alu 10846 NM_058164 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chrX-3622 chrX 86771505 86771715 + 6.48 0.000 intron (NM_001139515, intron 7 of 11) intron (NM_001139515, intron 7 of 11) 508642 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr19-6349 chr19 11212147 11212357 + 6.48 0.000 intron (NM_001367830, intron 36 of 48) AluSz|SINE|Alu 8624 NR_134909 105372273 Hs.579864 NR_134909 ENSG00000267082 LOC105372273 - uncharacterized LOC105372273 ncRNA chr1-16359 chr1 220157830 220158040 + 6.48 0.000 intron (NM_012414, intron 29 of 34) intron (NM_012414, intron 29 of 34) -39694 NR_029711 406969 NR_029711 ENSG00000207624 MIR194-1 MIRN194-1|mir-194-1 microRNA 194-1 ncRNA chr3-10632 chr3 147200470 147200680 + 6.48 0.000 Intergenic Intergenic 191855 NR_033119 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chr5-6547 chr5 13272894 13273104 + 6.48 0.000 Intergenic Intergenic -240113 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr19-6397 chr19 13415783 13415993 + 6.48 0.000 intron (NM_023035, intron 3 of 46) MIR3|SINE|MIR 90572 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr2-12539 chr2 66589983 66590193 + 6.48 0.000 intron (NR_110156, intron 1 of 5) intron (NR_110156, intron 1 of 5) 16058 NR_110156 100507073 Hs.667940 NR_110156 ENSG00000232046 LINC01798 - long intergenic non-protein coding RNA 1798 ncRNA chr4-3296 chr4 146847402 146847612 + 6.48 0.000 intron (NR_133922, intron 8 of 13) intron (NR_133922, intron 8 of 13) 98357 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr19-6927 chr19 46341799 46342009 + 6.48 0.000 3' UTR (NM_152794, exon 15 of 15) 3' UTR (NM_152794, exon 15 of 15) -5183 NM_001204284 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr3-9714 chr3 66555540 66555750 + 6.48 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu -55224 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr2-5598 chr2 177036931 177037141 + 6.48 0.000 Intergenic L2c|LINE|L2 175375 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr10-4627 chr10 121993734 121993944 + 6.48 0.000 intron (NM_206862, intron 1 of 22) AluJb|SINE|Alu 4676 NM_206862 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chrX-1115 chrX 20060919 20061129 + 6.48 0.000 intron (NM_152780, intron 3 of 15) intron (NM_152780, intron 3 of 15) -43837 NR_037414 100500809 NR_037414 ENSG00000264566 MIR23C hsa-mir-23c|mir-23c microRNA 23c ncRNA chr5-9024 chr5 168008293 168008503 + 6.48 0.000 intron (NM_001080428, intron 3 of 24) intron (NM_001080428, intron 3 of 24) -157447 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr1-14698 chr1 62995590 62995800 + 6.48 0.000 Intergenic Intergenic 15230 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr8-3515 chr8 116815260 116815470 + 6.48 0.000 Intergenic Intergenic 48841 NM_032334 84294 Hs.86970 NM_032334 ENSG00000147679 UTP23 C8orf53 UTP23 small subunit processome component protein-coding chr17-5673 chr17 50536510 50536720 + 6.48 0.000 TTS (NR_135675) TTS (NR_135675) 2139 NR_135675 105371824 Hs.683630 NR_135675 ENSG00000250286 LOC105371824 - uncharacterized LOC105371824 ncRNA chr2-3424 chr2 71566597 71566807 + 6.48 0.000 intron (NM_001130985, intron 24 of 54) intron (NM_001130985, intron 24 of 54) 100003 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr11-7213 chr11 134409231 134409441 + 6.48 0.000 intron (NM_054025, intron 1 of 5) intron (NM_054025, intron 1 of 5) 2582 NM_018644 27087 Hs.381050 NM_018644 ENSG00000109956 B3GAT1 CD57|GLCATP|GLCUATP|HNK1|LEU7|NK-1|NK1 beta-1,3-glucuronyltransferase 1 protein-coding chr1-12422 chr1 11374828 11375038 + 6.48 0.000 Intergenic Intergenic 101735 NM_013319 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr2-11895 chr2 23769705 23769915 + 6.48 0.000 intron (NR_125717, intron 23 of 28) AluSx|SINE|Alu 157313 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr5-7265 chr5 12858888 12859098 + 6.48 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 173893 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr4-4212 chr4 15577685 15577895 + 6.48 0.000 intron (NM_001080522, intron 30 of 37) intron (NM_001080522, intron 30 of 37) 77567 NM_012161 26234 Hs.643433 NM_012161 ENSG00000118564 FBXL5 FBL4|FBL5|FLR1 F-box and leucine rich repeat protein 5 protein-coding chr14-1352 chr14 100167705 100167915 + 6.48 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -8165 NM_206918 123099 Hs.159643 NM_206918 ENSG00000168350 DEGS2 C14orf66|DES2|FADS8 delta 4-desaturase, sphingolipid 2 protein-coding chr6-4443 chr6 34179533 34179743 + 6.48 0.000 Intergenic MER52D|LTR|ERV1 -24016 NM_001256809 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr1-13522 chr1 6058778 6058988 + 6.48 0.000 intron (NM_001199862, intron 2 of 15) intron (NM_001199862, intron 2 of 15) 12995 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chrX-3282 chrX 101990939 101991149 + 6.48 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -59017 NM_001011657 84460 Hs.496512 NM_001011657 ENSG00000166432 ZMAT1 - zinc finger matrin-type 1 protein-coding chr15-3047 chr15 60226086 60226296 + 6.48 0.000 Intergenic Intergenic 171795 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chrX-2192 chrX 40199635 40199845 + 6.48 0.000 Intergenic Intergenic -22411 NM_001123383 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr7-4701 chr7 45183310 45183520 + 6.48 0.000 3' UTR (NM_005856, exon 3 of 3) 3' UTR (NM_005856, exon 3 of 3) 25624 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr12-6509 chr12 108126833 108127043 + 6.48 0.000 Intergenic MIR|SINE|MIR -2350 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr1-8279 chr1 39104676 39104886 + 6.48 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 20614 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr3-8992 chr3 17795851 17796061 + 6.48 0.000 Intergenic L1MB4|LINE|L1 53012 NR_135536 105376975 Hs.543238 NR_135536 LOC105376975 - uncharacterized LOC105376975 ncRNA chr3-7709 chr3 48615947 48616157 + 6.48 0.000 Intergenic AluY|SINE|Alu 5717 NM_001008269 440955 Hs.631922 NM_001008269 ENSG00000183396 TMEM89 - transmembrane protein 89 protein-coding chr3-3988 chr3 56548473 56548683 + 6.48 0.000 Intergenic Intergenic -8578 NR_148373 285331 Hs.476399 NM_001012506 ENSG00000180376 CCDC66 - coiled-coil domain containing 66 protein-coding chr14-3523 chr14 103727656 103727866 + 6.48 0.000 exon (NM_001198953, exon 3 of 8) exon (NM_001198953, exon 3 of 8) 12017 NM_024071 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr4-8159 chr4 129148916 129149126 + 6.48 0.000 Intergenic Intergenic 52869 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr14-4287 chr14 20092760 20092970 + 6.48 0.000 Intergenic Intergenic -24603 NM_001004715 390436 NM_001004715 ENSG00000176230 OR4K17 OR14-29 olfactory receptor family 4 subfamily K member 17 protein-coding chr13-3576 chr13 26794202 26794412 + 6.48 0.000 Intergenic Intergenic -33521 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr20-4013 chr20 36393915 36394125 + 6.48 0.000 intron (NM_001365621, intron 2 of 12) L2b|LINE|L2 -67448 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr13-2990 chr13 96767239 96767449 + 6.48 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 216828 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr4-5587 chr4 177535720 177535930 + 6.48 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -93322 NR_033655 175 Hs.207776 NM_000027 ENSG00000038002 AGA AGU|ASRG|GA aspartylglucosaminidase protein-coding chr6-6338 chr6 53598842 53599052 + 6.48 0.000 Intergenic L1MEf|LINE|L1 -25672 NR_110840 101927136 Hs.509788 NR_110840 ENSG00000231683 LOC101927136 - uncharacterized LOC101927136 ncRNA chr9-8050 chr9 96728434 96728644 + 6.48 0.000 Intergenic Intergenic 2718 NR_026792 441455 Hs.229613 NR_026792 LOC441455 - makorin ring finger protein 1 pseudogene pseudo chr11-6294 chr11 61493804 61494014 + 6.48 0.000 Intergenic L2b|LINE|L2 12789 NM_145017 220004 Hs.729003 NM_145017 ENSG00000162148 PPP1R32 C11orf66|IIIG9 protein phosphatase 1 regulatory subunit 32 protein-coding chr3-10066 chr3 107699793 107700003 + 6.48 0.000 intron (NM_001276286, intron 3 of 16) intron (NM_001276286, intron 3 of 16) 176936 NM_001142568 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr17-8148 chr17 59637943 59638153 + 6.48 0.000 intron (NM_001288653, intron 1 of 31) intron (NM_001288653, intron 1 of 31) 18153 NM_004859 1213 Hs.491351 NM_004859 ENSG00000141367 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc|MRD56 clathrin heavy chain protein-coding chr8-5615 chr8 97553572 97553782 + 6.48 0.000 Intergenic Intergenic -90507 NM_001363137 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr5-6068 chr5 3346570 3346780 + 6.48 0.000 Intergenic Intergenic -106141 NR_147000 105374624 Hs.518991 NR_147000 ENSG00000249830 LINC02162 - long intergenic non-protein coding RNA 2162 ncRNA chr19-7074 chr19 55392084 55392294 + 6.48 0.000 TTS (NM_000991) TTS (NM_000991) 4008 NR_106863 102465483 NR_106863 ENSG00000284029 MIR6805 hsa-mir-6805 microRNA 6805 ncRNA chr11-7344 chr11 66358449 66358659 + 6.48 0.000 intron (NR_135761, intron 1 of 1) L1MB4|LINE|L1 10563 NR_135761 102724064 Hs.614641 NR_135761 ENSG00000255468 LOC102724064 - uncharacterized LOC102724064 ncRNA chr9-6354 chr9 15900867 15901077 + 6.48 0.000 intron (NM_001355547, intron 23 of 24) Charlie7|DNA|hAT-Charlie 336994 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr9-3262 chr9 21657056 21657266 + 6.48 0.000 Intergenic MER5B|DNA|hAT-Charlie -97363 NR_152879 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr6-7215 chr6 40080018 40080228 + 6.48 0.000 Intergenic L1MCc|LINE|L1 -145661 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr1-12842 chr1 94305700 94305910 + 6.48 0.000 Intergenic Intergenic -58059 NM_001328665 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr6-7158 chr6 36862426 36862636 + 6.48 0.000 intron (NM_016059, intron 2 of 3) MLT1L|LTR|ERVL-MaLR -9313 NM_001286636 221477 Hs.433381 NM_152734 ENSG00000198663 C6orf89 BRAP|PS1TP5TP1 chromosome 6 open reading frame 89 protein-coding chr20-4304 chr20 51154307 51154517 + 6.48 0.000 Intergenic Intergenic -131305 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr14-2982 chr14 51479998 51480208 + 6.48 0.000 intron (NR_051990, intron 2 of 2) intron (NR_051990, intron 2 of 2) -9025 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr3-3482 chr3 188788711 188788921 + 6.48 0.000 intron (NM_001167672, intron 7 of 9) intron (NM_001167672, intron 7 of 9) 100035 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr1-8315 chr1 47725083 47725293 + 6.48 0.000 Intergenic CpG 272197 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr15-2608 chr15 65055715 65055925 + 6.48 0.000 intron (NM_001307930, intron 3 of 3) intron (NM_001307930, intron 3 of 3) 10433 NM_178859 123264 Hs.27018 NM_178859 ENSG00000186198 SLC51B OSTB|OSTBETA solute carrier family 51 beta subunit protein-coding chr1-7567 chr1 205438654 205438864 + 6.48 0.000 intron (NR_103783, intron 1 of 1) intron (NR_103783, intron 1 of 1) 9639 NR_029893 442891 NR_029893 ENSG00000199059 MIR135B MIRN135B|mir-135b microRNA 135b ncRNA chr14-3320 chr14 87430577 87430787 + 6.48 0.000 Intergenic MLT2A2|LTR|ERVL 224612 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr1-11135 chr1 234488940 234489150 + 6.48 0.000 Intergenic Intergenic -9866 NM_005646 6894 Hs.498115 NM_005646 ENSG00000059588 TARBP1 TRM3|TRMT3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding chr4-4799 chr4 104609193 104609403 + 6.48 0.000 intron (NR_125926, intron 1 of 9) Tigger1|DNA|TcMar-Tigger -114404 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr16-6046 chr16 10617191 10617401 + 6.48 0.000 Intergenic Intergenic -36698 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr2-12131 chr2 37052958 37053168 + 6.48 0.000 intron (NM_019024, intron 17 of 35) MIRc|SINE|MIR 31309 NM_019024 54497 Hs.744084 NM_019024 ENSG00000008869 HEATR5B - HEAT repeat containing 5B protein-coding chr6-5748 chr6 156608646 156608856 + 6.48 0.000 Intergenic L1PA4|LINE|L1 -169104 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr11-7387 chr11 76341446 76341656 + 6.48 0.000 Intergenic Intergenic 39414 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr18-1610 chr18 45627756 45627966 + 6.48 0.000 intron (NM_007163, intron 4 of 19) AluSz|SINE|Alu 12385 NM_007163 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr10-6566 chr10 76337550 76337760 + 6.48 0.000 intron (NM_001305581, intron 6 of 6) MER57E1|LTR|ERV1 -550389 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr18-2522 chr18 74319317 74319527 + 6.48 0.000 intron (NM_001174123, intron 2 of 13) intron (NM_001174123, intron 2 of 13) 3583 NM_001174123 644041 Hs.465414 NM_001174123 ENSG00000206043 C18orf63 DKFZP781G0119 chromosome 18 open reading frame 63 protein-coding chr6-7465 chr6 56756437 56756647 + 6.48 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 87123 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr22-3562 chr22 18105028 18105238 + 6.48 0.000 3' UTR (NM_001127649, exon 5 of 5) 3' UTR (NM_001127649, exon 5 of 5) -5676 NM_018943 51807 Hs.137400 NM_018943 ENSG00000183785 TUBA8 CDCBM8|TUBAL2 tubulin alpha 8 protein-coding chr12-6320 chr12 53596944 53597154 + 6.48 0.000 intron (NR_073163, intron 2 of 12) intron (NR_073163, intron 2 of 12) 28941 NM_001366556 11016 Hs.12286 NM_006856 ENSG00000170653 ATF7 ATFA activating transcription factor 7 protein-coding chr17-3887 chr17 50133197 50133407 + 6.48 0.000 TTS (NM_032595) TTS (NM_032595) -3142 NM_001257359 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr7-3471 chr7 2059476 2059686 + 6.48 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 29471 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chrX-4884 chrX 106912056 106912266 + 6.48 0.000 intron (NM_001171092, intron 1 of 1) intron (NM_001171092, intron 1 of 1) -6199 NM_001171095 9075 Hs.522746 NM_020384 ENSG00000165376 CLDN2 - claudin 2 protein-coding chr1-9285 chr1 25716825 25717035 + 6.48 0.000 intron (NM_020379, intron 2 of 11) L1ME1|LINE|L1 -83263 NM_206926 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr9-6462 chr9 88166600 88166810 + 6.48 0.000 Intergenic Intergenic -28224 NM_001350978 645961 Hs.632070 NM_001166137 SPATA31C2 FAM75C2 SPATA31 subfamily C member 2 protein-coding chr7-7999 chr7 16429122 16429332 + 6.48 0.000 Intergenic Intergenic -7689 NM_001101426 729920 Hs.636502 NM_001101417 ENSG00000214960 CRPPA ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD CDP-L-ribitol pyrophosphorylase A protein-coding chr7-7008 chr7 125589449 125589659 + 6.48 0.000 Intergenic MIRb|SINE|MIR -325263 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr5-5395 chr5 135098476 135098686 + 6.48 0.000 intron (NR_161235, intron 2 of 5) MER44B|DNA|TcMar-Tigger -58534 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr1-16629 chr1 239667586 239667796 + 6.48 0.000 intron (NM_001347716, intron 4 of 7) intron (NM_001347716, intron 4 of 7) 38618 NM_000740 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr3-8989 chr3 17680417 17680627 + 6.48 0.000 intron (NM_001134381, intron 1 of 23) AluJb|SINE|Alu 19498 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr20-3018 chr20 49701143 49701353 + 6.48 0.000 intron (NM_004776, intron 1 of 8) intron (NM_004776, intron 1 of 8) 12630 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr18-3116 chr18 36786614 36786824 + 6.48 0.000 3' UTR (NM_001271951, exon 7 of 7) 3' UTR (NM_001271951, exon 7 of 7) 42283 NM_001330572 25941 Hs.436636 NM_015476 ENSG00000134779 TPGS2 C18orf10|HMFN0601|L17|PGs2 tubulin polyglutamylase complex subunit 2 protein-coding chr14-2826 chr14 23522878 23523088 + 6.48 0.000 intron (NM_033400, intron 9 of 9) intron (NM_033400, intron 9 of 9) 10173 NR_046052 79178 Hs.655179 NM_024328 ENSG00000259431 THTPA THTP|THTPASE thiamine triphosphatase protein-coding chr22-2538 chr22 25627684 25627894 + 6.48 0.000 intron (NM_001362778, intron 2 of 19) intron (NM_001362778, intron 2 of 19) 63114 NM_005160 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr3-8803 chr3 6526703 6526913 + 6.48 0.000 Intergenic AluSx|SINE|Alu 278641 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr4-3341 chr4 2806091 2806301 + 6.48 0.000 intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) -6095 NM_001145855 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr17-8474 chr17 78021066 78021276 + 6.48 0.000 intron (NM_018996, intron 2 of 20) intron (NM_018996, intron 2 of 20) 16934 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr6-3651 chr6 137579821 137580031 + 6.48 0.000 Intergenic Intergenic -85532 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr6-7237 chr6 41333612 41333822 + 6.48 0.000 Intergenic Intergenic -1891 NM_001199510 9436 Hs.194721 NM_004828 ENSG00000096264 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding chr2-11289 chr2 186089413 186089623 + 6.48 0.000 Intergenic LTR40a|LTR|ERVL -3201 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr2-8466 chr2 123168659 123168869 + 6.48 0.000 Intergenic MER50|LTR|ERV1 -95283 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr6-7679 chr6 85674604 85674814 + 6.48 0.000 Intergenic Intergenic 2659 NR_002743 26799 NR_002743 SNORD50A RNU50|U50 small nucleolar RNA, C/D box 50A snoRNA chr22-2727 chr22 38606505 38606715 + 6.48 0.000 intron (NM_001013647, intron 12 of 16) intron (NM_001013647, intron 12 of 16) 36110 NR_134627 105373031 Hs.144041 NR_134627 LOC105373031 - uncharacterized LOC105373031 ncRNA chr15-2535 chr15 43050089 43050299 + 6.48 0.000 intron (NM_174916, intron 12 of 46) AluJr4|SINE|Alu 55844 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr1-5958 chr1 29065952 29066162 + 6.48 0.000 TTS (NM_001166006) TTS (NM_001166006) 56444 NM_001171868 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr6-7262 chr6 42521959 42522169 + 6.48 0.000 Intergenic Intergenic -41958 NM_015255 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding chr11-6638 chr11 75168248 75168458 + 6.48 0.000 intron (NM_007256, intron 4 of 13) intron (NM_007256, intron 4 of 13) 8521 NM_001145211 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr2-8236 chr2 97060061 97060271 + 6.48 0.000 Intergenic Intergenic 34716 NM_001320848 151313 Hs.567723 NM_199336 ENSG00000144199 FAHD2B - fumarylacetoacetate hydrolase domain containing 2B protein-coding chr3-7376 chr3 65942082 65942292 + 6.48 0.000 intron (NR_145422, intron 1 of 2) intron (NR_145422, intron 1 of 2) 12371 NR_145422 151877 Hs.476636 NR_145422 ENSG00000272610 MAGI1-IT1 - MAGI1 intronic transcript 1 ncRNA chr22-3560 chr22 17769629 17769839 + 6.48 0.000 intron (NM_001244567, intron 1 of 5) intron (NM_001244567, intron 1 of 5) 4308 NM_197966 637 Hs.591054 NM_001196 ENSG00000015475 BID FP497 BH3 interacting domain death agonist protein-coding chr6-5122 chr6 121169755 121169965 + 6.48 0.000 intron (NM_152730, intron 22 of 31) intron (NM_152730, intron 22 of 31) 164620 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr7-4665 chr7 36614313 36614523 + 6.48 0.000 intron (NM_001177507, intron 10 of 19) MER45C|DNA|hAT-Tip100 -14298 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr5-4326 chr5 156951385 156951595 + 6.48 0.000 intron (NM_138379, intron 3 of 8) intron (NM_138379, intron 3 of 8) 11736 NM_001146726 91937 Hs.334907 NM_138379 ENSG00000145850 TIMD4 SMUCKLER|TIM4 T cell immunoglobulin and mucin domain containing 4 protein-coding chr2-13538 chr2 152343199 152343409 + 6.48 0.000 intron (NM_052905, intron 1 of 25) AluSz|SINE|Alu 8130 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr18-1819 chr18 14748062 14748272 + 6.48 0.000 promoter-TSS (NM_001367607) promoter-TSS (NM_001367607) -5 NM_001367607 374860 Hs.567889 NM_001145029 ENSG00000180777 ANKRD30B NY-BR-1.1 ankyrin repeat domain 30B protein-coding chr2-13329 chr2 133078551 133078761 + 6.48 0.000 intron (NM_207481, intron 6 of 17) intron (NM_207481, intron 6 of 17) 163099 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr2-13974 chr2 189267772 189267982 + 6.48 0.000 Intergenic Intergenic -88116 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr11-3879 chr11 93530350 93530560 + 6.48 0.000 intron (NM_020179, intron 1 of 2) intron (NM_020179, intron 1 of 2) 12936 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr9-8435 chr9 121807770 121807980 + 6.48 0.000 Intergenic Intergenic 65090 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr3-10148 chr3 114903143 114903353 + 6.48 0.000 intron (NM_001348805, intron 3 of 10) MIRb|SINE|MIR -2623 NR_121662 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr8-6520 chr8 66689744 66689954 + 6.48 0.000 intron (NM_001204173, intron 2 of 18) intron (NM_001204173, intron 2 of 18) 22253 NM_001204173 100533105 NM_001204173 ENSG00000104205 C8orf44-SGK3 - C8orf44-SGK3 readthrough protein-coding chr2-14075 chr2 198445400 198445610 + 6.48 0.000 Intergenic L2b|LINE|L2 -70408 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr9-5546 chr9 109517567 109517777 + 6.48 0.000 Intergenic MER5A|DNA|hAT-Charlie -6127 NR_037493 100500898 NR_037493 ENSG00000263861 MIR3927 - microRNA 3927 ncRNA chr6-2604 chr6 122753748 122753958 + 6.48 0.000 intron (NM_001319042, intron 1 of 3) MER51A|LTR|ERV1 4652 NM_001319042 2173 Hs.26770 NM_001446 ENSG00000164434 FABP7 B-FABP|BLBP|FABPB|MRG fatty acid binding protein 7 protein-coding chr5-2563 chr5 9173729 9173939 + 6.48 0.000 intron (NM_003966, intron 11 of 22) intron (NM_003966, intron 11 of 22) -119939 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr3-8266 chr3 52363087 52363297 + 6.48 0.000 intron (NM_015512, intron 32 of 77) intron (NM_015512, intron 32 of 77) 46816 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr3-10293 chr3 125386951 125387161 + 6.48 0.000 Intergenic Intergenic -11702 NM_001348428 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr9-6329 chr9 3063151 3063361 + 6.48 0.000 Intergenic Intergenic -118333 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr12-5906 chr12 62621704 62621914 + 6.48 0.000 Intergenic Intergenic 18123 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr7-7365 chr7 57198543 57198753 + 6.48 0.000 Intergenic AluSq10|SINE|Alu -18492 NR_030766 642006 Hs.562648 NR_030766 GUSBP10 - GUSB pseudogene 10 pseudo chr1-8123 chr1 10191096 10191306 + 6.48 0.000 Intergenic MSTB|LTR|ERVL-MaLR -19369 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr7-7152 chr7 4659768 4659978 + 6.48 0.000 Intergenic LTR50|LTR|ERVL -22422 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr12-7623 chr12 79767186 79767396 + 6.48 0.000 Intergenic L4_A_Mam|LINE|RTE-X -76194 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr2-13634 chr2 159840416 159840626 + 6.48 0.000 intron (NM_002349, intron 25 of 34) AluJb|SINE|Alu -42266 NM_001198763 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr1-11617 chr1 233057605 233057815 + 6.48 0.000 intron (NM_014801, intron 23 of 33) AluSz|SINE|Alu 106868 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr18-1900 chr18 31442619 31442829 + 6.48 0.000 Intergenic Intergenic -5017 NM_001944 1830 Hs.1925 NM_001944 ENSG00000134757 DSG3 CDHF6|PVA desmoglein 3 protein-coding chr2-11485 chr2 233818903 233819113 + 6.48 0.000 intron (NM_001367507, intron 29 of 41) intron (NM_001367507, intron 29 of 41) 35527 NM_018410 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding chr1-8864 chr1 3752552 3752762 + 6.48 0.000 exon (NM_152492, exon 1 of 12) exon (NM_152492, exon 1 of 12) 207 NM_152492 148870 Hs.348700 NM_152492 ENSG00000162592 CCDC27 - coiled-coil domain containing 27 protein-coding chr9-8101 chr9 98805009 98805219 + 6.48 0.000 Intergenic Intergenic -2556 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chr15-4350 chr15 40815687 40815897 + 6.48 0.000 TTS (NM_001258420) TTS (NM_001258420) -8319 NM_018163 55192 Hs.511069 NM_018163 ENSG00000104129 DNAJC17 - DnaJ heat shock protein family (Hsp40) member C17 protein-coding chr3-1976 chr3 129262130 129262340 + 6.48 0.000 intron (NM_016128, intron 12 of 23) AluJr|SINE|Alu -9911 NR_106884 102465496 NR_106884 ENSG00000278658 MIR6826 hsa-mir-6826 microRNA 6826 ncRNA chr1-5611 chr1 14826354 14826564 + 6.48 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) -97670 NM_001018000 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr7-5385 chr7 32416173 32416383 + 6.48 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 11946 NM_001322059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr10-8374 chr10 80855291 80855501 + 6.48 0.000 Intergenic Intergenic 205599 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr1-14500 chr1 49757066 49757276 + 6.48 0.000 intron (NM_001323575, intron 2 of 12) THE1C|LTR|ERVL-MaLR 266783 NM_001323574 84871 Hs.551844 NM_032785 ENSG00000186094 AGBL4 CCP6 ATP/GTP binding protein like 4 protein-coding chr11-9141 chr11 33992879 33993089 + 6.48 0.000 Intergenic AluJo|SINE|Alu -58747 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr19-3926 chr19 47158375 47158585 + 6.48 0.000 intron (NM_005500, intron 5 of 8) intron (NM_005500, intron 5 of 8) 27645 NM_005500 10055 Hs.515500 NM_005500 ENSG00000142230 SAE1 AOS1|HSPC140|SUA1|UBLE1A SUMO1 activating enzyme subunit 1 protein-coding chr5-2932 chr5 139860179 139860389 + 6.48 0.000 intron (NM_013982, intron 5 of 10) intron (NM_013982, intron 5 of 10) 64476 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr9-3141 chr9 97807577 97807787 + 6.48 0.000 intron (NR_147055, intron 2 of 10) intron (NR_147055, intron 2 of 10) 45398 NR_147055 101928337 NR_147055 ENSG00000236130 PTCSC2 - papillary thyroid carcinoma susceptibility candidate 2 ncRNA chr3-9041 chr3 22988914 22989124 + 6.48 0.000 Intergenic AluJb|SINE|Alu 213559 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr11-10167 chr11 93627884 93628094 + 6.48 0.000 Intergenic MER4A|LTR|ERV1 -33693 NM_033395 85459 Hs.458418 NM_033395 ENSG00000166004 CEP295 KIAA1731 centrosomal protein 295 protein-coding chr19-5387 chr19 11059125 11059335 + 6.48 0.000 intron (NM_001128845, intron 30 of 32) intron (NM_001128845, intron 30 of 32) -30132 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr20-3031 chr20 62135545 62135755 + 6.48 0.000 TTS (NM_144703) TTS (NM_144703) 7744 NM_002792 5688 Hs.233952 NM_002792 ENSG00000101182 PSMA7 C6|HEL-S-276|HSPC|RC6-1|XAPC7 proteasome subunit alpha 7 protein-coding chr2-11816 chr2 17495322 17495532 + 6.48 0.000 Intergenic L2a|LINE|L2 23013 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr15-4502 chr15 51780794 51781004 + 6.48 0.000 intron (NM_001142885, intron 5 of 8) intron (NM_001142885, intron 5 of 8) 29302 NM_001142885 29767 Hs.513734 NM_014548 ENSG00000128872 TMOD2 N-TMOD|NTMOD tropomodulin 2 protein-coding chr17-7082 chr17 67065871 67066081 + 6.48 0.000 Intergenic AluSc|SINE|Alu 21422 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr2-11165 chr2 148858052 148858262 + 6.48 0.000 Intergenic L1PA13|LINE|L1 -17070 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr13-3886 chr13 52211096 52211306 + 6.36 0.000 Intergenic Intergenic -16734 NR_051963 100887750 Hs.553878 NR_002816 ENSG00000243406 MRPS31P5 MRPS31P3 mitochondrial ribosomal protein S31 pseudogene 5 pseudo chr8-6767 chr8 92090704 92090914 + 6.36 0.000 intron (NM_001198627, intron 2 of 13) intron (NM_001198627, intron 2 of 13) 4421 NM_175635 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr3-6668 chr3 130016491 130016701 + 6.36 0.000 Intergenic Intergenic 41876 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr11-6292 chr11 61304848 61305058 + 6.36 0.000 intron (NM_001923, intron 21 of 26) intron (NM_001923, intron 21 of 26) -9637 NM_152718 220001 Hs.60640 NM_152718 ENSG00000167992 VWCE URG11|VWC1 von Willebrand factor C and EGF domains protein-coding chr11-6200 chr11 45829152 45829362 + 6.36 0.000 Intergenic MER102b|DNA|hAT-Charlie -17861 NM_001127457 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr1-15576 chr1 159998034 159998244 + 6.36 0.000 Intergenic MER34C_|LTR|ERV1 33851 NM_145167 93183 Hs.552810 NM_145167 ENSG00000143315 PIGM GPI-MT-I phosphatidylinositol glycan anchor biosynthesis class M protein-coding chr6-4654 chr6 50353482 50353692 + 6.36 0.000 Intergenic L1PB3|LINE|L1 -303658 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding chr9-5022 chr9 27075678 27075888 + 6.36 0.000 Intergenic L1PA12|LINE|L1 -33358 NM_001290078 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr2-11866 chr2 22202415 22202625 + 6.36 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -333959 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr18-2891 chr18 10822662 10822872 + 6.36 0.000 intron (NM_022068, intron 7 of 51) intron (NM_022068, intron 7 of 51) -63118 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chr15-4442 chr15 45799620 45799830 + 6.36 0.000 intron (NR_135680, intron 1 of 4) MLT1C|LTR|ERVL-MaLR 94530 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr1-16193 chr1 207404974 207405184 + 6.36 0.000 Intergenic Intergenic -49221 NM_001006658 1380 Hs.445757 NM_001877 ENSG00000117322 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement C3d receptor 2 protein-coding chr11-7963 chr11 7524489 7524699 + 6.36 0.000 intron (NM_003621, intron 1 of 23) BLACKJACK|DNA|hAT-Blackjack 10595 NM_003621 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr4-6536 chr4 172957313 172957523 + 6.36 0.000 intron (NM_001034845, intron 10 of 12) HERVH-int|LTR|ERV1 -211393 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chrX-2289 chrX 51611375 51611585 + 6.36 0.000 Intergenic Intergenic 7438 NM_001355276 347549 NM_001355276 ENSG00000224109 CENPVL3 CENPVP3 centromere protein V like 3 protein-coding chr17-2555 chr17 44369520 44369730 + 6.36 0.000 Intergenic LTR12C|LTR|ERV1 -5772 NM_198475 284069 Hs.154001 NM_198475 ENSG00000161682 FAM171A2 - family with sequence similarity 171 member A2 protein-coding chr19-6995 chr19 49077611 49077821 + 6.36 0.000 Intergenic AluSx|SINE|Alu -4775 NM_031886 3743 Hs.306973 NM_031886 ENSG00000104848 KCNA7 HAK6|KV1.7 potassium voltage-gated channel subfamily A member 7 protein-coding chr10-3495 chr10 69451491 69451701 + 6.36 0.000 non-coding (NR_147091, exon 1 of 8) non-coding (NR_147091, exon 1 of 8) 129 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr9-7343 chr9 14811508 14811718 + 6.36 0.000 intron (NR_163238, intron 17 of 30) intron (NR_163238, intron 17 of 30) -31182 NM_001370061 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr2-11934 chr2 25241522 25241732 + 6.36 0.000 exon (NM_175629, exon 17 of 23) exon (NM_175629, exon 17 of 23) 10504 NM_001320893 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr20-2696 chr20 47117883 47118093 + 6.36 0.000 intron (NM_172110, intron 9 of 13) intron (NM_172110, intron 9 of 13) -48979 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA chr3-6813 chr3 146092593 146092803 + 6.36 0.000 intron (NM_182943, intron 7 of 19) intron (NM_182943, intron 7 of 19) -23513 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chrX-4988 chrX 117562742 117562952 + 6.36 0.000 Intergenic MLT1I-int|LTR|ERVL-MaLR 410891 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr1-14250 chr1 36675092 36675302 + 6.36 0.000 Intergenic Intergenic -191883 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr12-8069 chr12 116680562 116680772 + 6.36 0.000 Intergenic L1MA10|LINE|L1 57402 NM_001353625 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr17-4379 chr17 20744850 20745060 + 6.36 0.000 Intergenic Intergenic 32509 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr11-5379 chr11 65676332 65676542 + 6.36 0.000 Intergenic AluSz6|SINE|Alu -13465 NM_001243985 5970 Hs.502875 NM_021975 ENSG00000173039 RELA CMCU|NFKB3|p65 RELA proto-oncogene, NF-kB subunit protein-coding chr12-7065 chr12 41439503 41439713 + 6.36 0.000 intron (NM_013377, intron 1 of 7) intron (NM_013377, intron 1 of 7) 1869 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr20-1451 chr20 58850895 58851105 + 6.36 0.000 promoter-TSS (NR_002785) promoter-TSS (NR_002785) -97 NR_002785 149775 Hs.122718 NR_002785 ENSG00000235590 GNAS-AS1 GNAS-AS|GNAS1AS|GNASAS|NCRNA00075|NESP-AS|NESPAS|SANG GNAS antisense RNA 1 ncRNA chr9-7955 chr9 91355207 91355417 + 6.36 0.000 intron (NM_001698, intron 3 of 9) AluSx1|SINE|Alu 6612 NM_001698 549 Hs.175905 NM_001698 ENSG00000148090 AUH - AU RNA binding methylglutaconyl-CoA hydratase protein-coding chr4-8650 chr4 176575178 176575388 + 6.36 0.000 Intergenic Intergenic 217639 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr11-6825 chr11 95086239 95086449 + 6.36 0.000 Intergenic L2c|LINE|L2 -3502 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding chr14-2840 chr14 27673355 27673565 + 6.36 0.000 promoter-TSS (NR_148991) promoter-TSS (NR_148991) -239 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chr2-14531 chr2 229569288 229569498 + 6.36 0.000 intron (NM_139072, intron 4 of 12) AluSz|SINE|Alu 145162 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr4-2454 chr4 176390190 176390400 + 6.36 0.000 Intergenic Intergenic 70329 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr7-7973 chr7 13778917 13779127 + 6.36 0.000 Intergenic LTR16A|LTR|ERVL 207492 NM_001163150 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr4-5853 chr4 114360224 114360434 + 6.36 0.000 Intergenic L1MA3|LINE|L1 -238073 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr18-2826 chr18 6496266 6496476 + 6.36 0.000 Intergenic L1MEd|LINE|L1 -15045 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA chr15-4487 chr15 50861138 50861348 + 6.36 0.000 Intergenic L2a|LINE|L2 -47440 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr10-6877 chr10 32072851 32073061 + 6.36 0.000 Intergenic Intergenic -16531 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr4-7260 chr4 47715215 47715425 + 6.36 0.000 intron (NM_006587, intron 5 of 21) intron (NM_006587, intron 5 of 21) 62651 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA chr14-3884 chr14 92050953 92051163 + 6.36 0.000 Intergenic Intergenic -10999 NM_004239 9321 Hs.632339 NM_004239 ENSG00000100815 TRIP11 ACG1A|CEV14|GMAP-210|GMAP210|ODCD|TRIP-11|TRIP230 thyroid hormone receptor interactor 11 protein-coding chr3-8922 chr3 13189519 13189729 + 6.36 0.000 Intergenic Intergenic -116195 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr7-6306 chr7 140242713 140242923 + 6.36 0.000 Intergenic Intergenic 65557 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr3-7299 chr3 14514214 14514424 + 6.36 0.000 exon (NM_001080423, exon 12 of 24) exon (NM_001080423, exon 12 of 24) 26023 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chrX-3537 chrX 54001331 54001541 + 6.36 0.000 intron (NM_001184898, intron 10 of 21) AluSx1|SINE|Alu 41711 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr3-7083 chr3 178576366 178576576 + 6.36 0.000 intron (NM_001278911, intron 1 of 4) L1PA7|LINE|L1 17621 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr1-15093 chr1 99155210 99155420 + 6.36 0.000 Intergenic L2b|LINE|L2 -108977 NM_014839 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chr1-13801 chr1 18739530 18739740 + 6.36 0.000 intron (NM_001135254, intron 8 of 8) intron (NM_001135254, intron 8 of 8) 108789 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr2-11594 chr2 2175719 2175929 + 6.36 0.000 intron (NM_015025, intron 2 of 24) intron (NM_015025, intron 2 of 24) -143408 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr2-11671 chr2 7345668 7345878 + 6.36 0.000 Intergenic Intergenic -75488 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr11-7840 chr11 114219788 114219998 + 6.36 0.000 intron (NM_006006, intron 4 of 6) intron (NM_006006, intron 4 of 6) -75920 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr8-1332 chr8 32548076 32548286 + 6.36 0.000 promoter-TSS (NM_013958) promoter-TSS (NM_013958) -29 NM_013958 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr1-11133 chr1 234214248 234214458 + 6.36 0.000 5' UTR (NM_001300845, exon 1 of 7) 5' UTR (NM_001300845, exon 1 of 7) 142 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr10-7202 chr10 112408224 112408434 + 6.36 0.000 intron (NM_203379, intron 5 of 20) intron (NM_203379, intron 5 of 20) 32131 NM_016234 51703 Hs.11638 NM_016234 ENSG00000197142 ACSL5 ACS2|ACS5|FACL5 acyl-CoA synthetase long chain family member 5 protein-coding chr10-4298 chr10 13758482 13758692 + 6.36 0.000 intron (NM_001318336, intron 7 of 23) MER61C|LTR|ERV1 -51020 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr17-5547 chr17 44170345 44170555 + 6.36 0.000 promoter-TSS (NM_080863) promoter-TSS (NM_080863) -254 NM_080863 92591 Hs.534517 NM_080863 ENSG00000161664 ASB16 - ankyrin repeat and SOCS box containing 16 protein-coding chr2-14565 chr2 231235810 231236020 + 6.36 0.000 intron (NM_001352757, intron 8 of 19) AluSp|SINE|Alu 37284 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr4-7479 chr4 71758275 71758485 + 6.36 0.000 intron (NM_000583, intron 6 of 12) intron (NM_000583, intron 6 of 12) 25699 NM_000583 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr9-7443 chr9 26091668 26091878 + 6.36 0.000 intron (NM_001004352, intron 1 of 6) MLT1C|LTR|ERVL-MaLR 25098 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr1-15336 chr1 119840447 119840657 + 6.36 0.000 intron (NM_001047980, intron 3 of 7) intron (NM_001047980, intron 3 of 7) 4328 NM_001047980 343505 NM_001047980 NBPF7 - NBPF member 7 protein-coding chr5-8112 chr5 97920762 97920972 + 6.36 0.000 intron (NR_146299, intron 2 of 2) intron (NR_146299, intron 2 of 2) 80109 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA chr14-5184 chr14 92822295 92822505 + 6.36 0.000 intron (NM_005113, intron 8 of 12) intron (NM_005113, intron 8 of 12) 28095 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr1-7280 chr1 236375691 236375901 + 6.36 0.000 Intergenic AluJr4|SINE|Alu -18490 NM_145861 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr6-7832 chr6 103701503 103701713 + 6.36 0.000 Intergenic Intergenic 1157938 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr13-4380 chr13 108764822 108765032 + 6.36 0.000 intron (NM_015011, intron 4 of 34) intron (NM_015011, intron 4 of 34) 135316 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr9-5795 chr9 128666563 128666773 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -9818 NM_052844 89891 Hs.495240 NM_052844 ENSG00000119333 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding chr6-6183 chr6 11367046 11367256 + 6.36 0.000 intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 15197 NM_001142393 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr3-10499 chr3 136221104 136221314 + 6.36 0.000 Intergenic HERVH-int|LTR|ERV1 -24874 NM_018133 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr20-4303 chr20 51130915 51131125 + 6.36 0.000 Intergenic Intergenic -107913 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr13-2370 chr13 39597842 39598052 + 6.36 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 5246 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr3-6190 chr3 61109858 61110068 + 6.36 0.000 intron (NR_148922, intron 2 of 3) L2a|LINE|L2 141489 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr18-2994 chr18 24419684 24419894 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -6881 NM_018439 55364 Hs.515317 NM_018439 ENSG00000154059 IMPACT RWDD5 impact RWD domain protein protein-coding chr2-11688 chr2 8948172 8948382 + 6.36 0.000 intron (NR_135600, intron 1 of 12) Tigger1|DNA|TcMar-Tigger 55407 NR_135600 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chrX-2502 chrX 93973641 93973851 + 6.36 0.000 Intergenic LTR12E|LTR|ERV1 299540 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr13-2210 chr13 22932582 22932792 + 6.36 0.000 Intergenic Intergenic -16318 NR_138043 100996930 Hs.380803 NR_138043 LINC00621 - long intergenic non-protein coding RNA 621 ncRNA chr18-3562 chr18 77646404 77646614 + 6.36 0.000 Intergenic L1MDa|LINE|L1 347218 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr17-4248 chr17 50567799 50568009 + 6.36 0.000 intron (NR_046058, intron 1 of 33) intron (NR_046058, intron 1 of 33) -5796 NR_038439 253962 Hs.558704 NR_038439 ENSG00000250107 CACNA1G-AS1 CAS1 CACNA1G antisense RNA 1 ncRNA chrX-3319 chrX 119457307 119457517 + 6.36 0.000 Intergenic L2a|LINE|L2 10850 NR_134915 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr2-6011 chr2 86054619 86054829 + 6.36 0.000 intron (NM_015425, intron 14 of 33) intron (NM_015425, intron 14 of 33) 51162 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr2-3891 chr2 42930226 42930436 + 6.36 0.000 Intergenic (TTGCTTT)n|Simple_repeat|Simple_repeat 109212 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr11-6821 chr11 94665341 94665551 + 6.36 0.000 intron (NR_135096, intron 4 of 6) MER91C|DNA|hAT-Tip100 74909 NR_135096 105369438 Hs.568921 NR_135093 ENSG00000255929 LOC105369438 - uncharacterized LOC105369438 ncRNA chr4-5703 chr4 31442218 31442428 + 6.36 0.000 Intergenic MER48|LTR|ERV1 -64221 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr2-9996 chr2 19786652 19786862 + 6.36 0.000 Intergenic Intergenic -82097 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr10-4770 chr10 4635614 4635824 + 6.36 0.000 Intergenic Intergenic -20437 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA chrX-4021 chrX 17119455 17119665 + 6.36 0.000 intron (NM_001080975, intron 14 of 17) intron (NM_001080975, intron 14 of 17) 172902 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chrX-4789 chrX 98544453 98544663 + 6.36 0.000 Intergenic Intergenic -980023 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr13-3650 chr13 31801294 31801504 + 6.36 0.000 intron (NM_130806, intron 17 of 17) MIRb|SINE|MIR -45384 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr16-6331 chr16 49552108 49552318 + 6.36 0.000 intron (NM_001271620, intron 5 of 7) intron (NM_001271620, intron 5 of 7) -33628 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr5-6982 chr5 149364586 149364796 + 6.36 0.000 intron (NM_001301057, intron 3 of 5) MER102b|DNA|hAT-Charlie 6645 NM_001301054 78991 Hs.644397 NM_024028 ENSG00000145882 PCYOX1L - prenylcysteine oxidase 1 like protein-coding chr1-5280 chr1 209129235 209129445 + 6.36 0.000 Intergenic SVA_D|Retroposon|SVA 156886 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr12-7923 chr12 108589157 108589367 + 6.36 0.000 TTS (NM_181724) TTS (NM_181724) 8822 NM_181724 338773 Hs.449718 NM_181724 ENSG00000183160 TMEM119 OBIF transmembrane protein 119 protein-coding chr5-8741 chr5 146290773 146290983 + 6.36 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -47961 NM_002700 5459 Hs.553499 NM_002700 ENSG00000091010 POU4F3 BRN3C|DFNA15|DFNA42|DFNA52 POU class 4 homeobox 3 protein-coding chr13-2301 chr13 31599057 31599267 + 6.36 0.000 Intergenic Intergenic -140364 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr4-4985 chr4 134408209 134408419 + 6.36 0.000 Intergenic Intergenic -15554 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr17-7508 chr17 17181769 17181979 + 6.36 0.000 intron (NM_201274, intron 23 of 23) intron (NM_201274, intron 23 of 23) 24459 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr22-1675 chr22 45359280 45359490 + 6.36 0.000 intron (NM_148674, intron 18 of 24) intron (NM_148674, intron 18 of 24) 40942 NM_001349913 55007 Hs.265018 NM_017911 ENSG00000100376 FAM118A C22orf8 family with sequence similarity 118 member A protein-coding KI270723.1-3 KI270723.1 34143 34353 + 6.36 0.000 NA NA NA NA chr2-10655 chr2 18613862 18614072 + 6.36 0.000 Intergenic MLT2B1|LTR|ERVL -24387 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr18-2991 chr18 24317433 24317643 + 6.36 0.000 intron (NM_080597, intron 9 of 27) intron (NM_080597, intron 9 of 27) -4137 NR_031724 100302195 NR_031724 ENSG00000212051 MIR320C2 MIR320C-2|MIRN320C2|hsa-mir-320c-2|mir-320c-2 microRNA 320c-2 ncRNA chr14-4386 chr14 28768292 28768502 + 6.36 0.000 exon (NM_005249, exon 1 of 1) exon (NM_005249, exon 1 of 1) 1610 NM_005249 2290 Hs.632336 NM_005249 ENSG00000176165 FOXG1 BF1|BF2|FHKL3|FKH2|FKHL1|FKHL2|FKHL3|FKHL4|FOXG1A|FOXG1B|FOXG1C|HBF-1|HBF-2|HBF-3|HBF-G2|HBF2|HFK1|HFK2|HFK3|KHL2|QIN forkhead box G1 protein-coding chr8-2931 chr8 19757362 19757572 + 6.36 0.000 promoter-TSS (NM_001354488) promoter-TSS (NM_001354488) -161 NM_001354488 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr19-4544 chr19 9996469 9996679 + 6.36 0.000 intron (NM_015719, intron 12 of 66) intron (NM_015719, intron 12 of 66) 13930 NM_015719 50509 Hs.235368 NM_015719 ENSG00000080573 COL5A3 - collagen type V alpha 3 chain protein-coding chr7-8256 chr7 36270024 36270234 + 6.36 0.000 intron (NM_030636, intron 3 of 7) (TG)n|Simple_repeat|Simple_repeat 97111 NM_001199707 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr3-4779 chr3 115099214 115099424 + 6.36 0.000 intron (NM_001348800, intron 1 of 11) intron (NM_001348800, intron 1 of 11) 989 NM_001348804 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr9-5138 chr9 37477732 37477942 + 6.36 0.000 Intergenic Intergenic -8098 NM_001282766 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr3-5688 chr3 13761650 13761860 + 6.36 0.000 Intergenic L3|LINE|CR1 111034 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr5-3790 chr5 77086989 77087199 + 6.36 0.000 intron (NR_024398, intron 1 of 3) CpG 191 NM_001329564 84327 Hs.584988 NM_032367 ENSG00000132846 ZBED3 - zinc finger BED-type containing 3 protein-coding chr9-6842 chr9 70230858 70231068 + 6.36 0.000 intron (NR_039990, intron 2 of 3) L1MEd|LINE|L1 27911 NR_039990 100507299 Hs.556816 NR_039990 SMC5-AS1 MAMDC2-AS2 SMC5 antisense RNA 1 (head to head) ncRNA chr7-4123 chr7 54671992 54672202 + 6.36 0.000 Intergenic Intergenic 87114 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr10-3463 chr10 58665557 58665767 + 6.36 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -49353 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr8-7031 chr8 111643834 111644044 + 6.36 0.000 Intergenic LTR12C|LTR|ERV1 267300 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr8-7245 chr8 128005592 128005802 + 6.36 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) -3201 NR_031611 100302170 NR_031611 ENSG00000283200 MIR1206 MIRN1206|hsa-mir-1206 microRNA 1206 ncRNA chr2-12691 chr2 76486617 76486827 + 6.36 0.000 Intergenic L1MD3|LINE|L1 -499243 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr3-8020 chr3 190762953 190763163 + 6.36 0.000 Intergenic LTR16E2|LTR|ERVL 99636 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr14-3268 chr14 79071287 79071497 + 6.36 0.000 intron (NR_073547, intron 14 of 20) L1PA7|LINE|L1 -128590 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr14-3160 chr14 69334673 69334883 + 6.36 0.000 intron (NM_020692, intron 9 of 15) LTR33|LTR|ERVL 63521 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr7-4668 chr7 37789724 37789934 + 6.36 0.000 Intergenic SATR2|Satellite|Satellite -58768 NM_016616 51314 Hs.723454 NM_016616 ENSG00000086288 NME8 CILD6|HEL-S-99|NM23-H8|SPTRX2|TXNDC3|sptrx-2 NME/NM23 family member 8 protein-coding chr1-7394 chr1 31384127 31384337 + 6.36 0.000 Intergenic Intergenic -10944 NM_001320996 2170 Hs.576372 NM_004102 ENSG00000121769 FABP3 FABP11|H-FABP|M-FABP|MDGI|O-FABP fatty acid binding protein 3 protein-coding chr3-7530 chr3 178871549 178871759 + 6.36 0.000 Intergenic AluSg4|SINE|Alu -11249 NR_126560 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr1-13810 chr1 19090687 19090897 + 6.36 0.000 intron (NM_020765, intron 97 of 105) intron (NM_020765, intron 97 of 105) 119474 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr11-10015 chr11 80750162 80750372 + 6.36 0.000 TTS (NR_120570) TTS (NR_120570) 12536 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr22-3696 chr22 24432503 24432713 + 6.36 0.000 intron (NR_028484, intron 4 of 6) intron (NR_028484, intron 4 of 6) 489 NM_001278498 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chr1-15676 chr1 166905128 166905338 + 6.36 0.000 Intergenic Intergenic -28969 NM_053053 117143 Hs.435967 NM_053053 ENSG00000152382 TADA1 ADA1|HFI1|STAF42|TADA1L|hADA1 transcriptional adaptor 1 protein-coding chr12-3557 chr12 5968902 5969112 + 6.36 0.000 intron (NM_000552, intron 45 of 51) intron (NM_000552, intron 45 of 51) -22775 NM_001278597 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr3-10026 chr3 102802195 102802405 + 6.36 0.000 Intergenic MIRb|SINE|MIR 367285 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr1-16502 chr1 229874722 229874932 + 6.36 0.000 TTS (NR_146476) TTS (NR_146476) 10991 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr19-3577 chr19 47696284 47696494 + 6.36 0.000 intron (NM_015711, intron 10 of 14) intron (NM_015711, intron 10 of 14) -17033 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr22-1815 chr22 35376884 35377094 + 6.36 0.000 Intergenic Intergenic -4107 NM_002133 3162 Hs.517581 NM_002133 ENSG00000100292 HMOX1 HMOX1D|HO-1|HSP32|bK286B10 heme oxygenase 1 protein-coding chr20-3978 chr20 35267598 35267808 + 6.36 0.000 intron (NM_006690, intron 6 of 8) MIRb|SINE|MIR 10419 NM_001355004 101410538 Hs.356273 NM_001355003 ENSG00000126005 MMP24OS MMP24-AS1 MMP24 opposite strand protein-coding chr8-5138 chr8 72607235 72607445 + 6.36 0.000 intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) 70115 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr20-4186 chr20 45559469 45559679 + 6.36 0.000 intron (NM_130896, intron 2 of 5) MIRb|SINE|MIR -12173 NM_001198986 100526773 Hs.274876 NM_001198986 ENSG00000249139 EPPIN-WFDC6 SPINLW1-WFDC6 EPPIN-WFDC6 readthrough protein-coding chr22-3915 chr22 36293012 36293222 + 6.36 0.000 intron (NM_002473, intron 30 of 40) Charlie4a|DNA|hAT-Charlie -6210 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr14-2729 chr14 95950556 95950766 + 6.36 0.000 Intergenic L1MB3|LINE|L1 73889 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr5-4897 chr5 67721527 67721737 + 6.36 0.000 Intergenic Intergenic -71581 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA chr2-10268 chr2 123667031 123667241 + 6.36 0.000 Intergenic Intergenic 358038 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA chr11-6121 chr11 38593576 38593786 + 6.36 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 52675 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA chr2-12064 chr2 31594404 31594614 + 6.36 0.000 Intergenic L1PB1|LINE|L1 -13571 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr6-3899 chr6 65272614 65272824 + 6.36 0.000 intron (NM_001292009, intron 12 of 43) intron (NM_001292009, intron 12 of 43) -28699 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr8-7024 chr8 110560360 110560570 + 6.36 0.000 Intergenic LTR1B1|LTR|ERV1 466968 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr5-5948 chr5 91504738 91504948 + 6.36 0.000 Intergenic Intergenic -121526 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr2-6200 chr2 17822230 17822440 + 6.36 0.000 Intergenic Intergenic 5875 NM_001105569 343930 NM_001105569 ENSG00000151379 MSGN1 MSOG|pMsgn1 mesogenin 1 protein-coding chr17-6920 chr17 40075276 40075486 + 6.36 0.000 intron (NM_001190919, intron 2 of 9) intron (NM_001190919, intron 2 of 9) 12416 NM_199334 7067 Hs.724 NM_003250 ENSG00000126351 THRA AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1 thyroid hormone receptor alpha protein-coding chr2-7906 chr2 56544126 56544336 + 6.36 0.000 Intergenic Intergenic -358461 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr1-14710 chr1 64382730 64382940 + 6.36 0.000 Intergenic Intergenic -87294 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr11-6989 chr11 116703666 116703876 + 6.36 0.000 Intergenic Intergenic 64349 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr2-8593 chr2 139067938 139068148 + 6.36 0.000 Intergenic L2a|LINE|L2 170719 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr22-2783 chr22 41706118 41706328 + 6.36 0.000 intron (NM_152513, intron 3 of 30) AluJr|SINE|Alu 6720 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr11-7821 chr11 109155234 109155444 + 6.36 0.000 Intergenic L1MB3|LINE|L1 -266851 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr13-3595 chr13 28510525 28510735 + 6.36 0.000 Intergenic Intergenic -15502 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr5-6576 chr5 22929197 22929407 + 6.36 0.000 Intergenic LTR10D|LTR|ERV1 -75958 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr7-7259 chr7 30695505 30695715 + 6.36 0.000 intron (NM_001202481, intron 1 of 13) intron (NM_001202481, intron 1 of 13) 4493 NM_001202481 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr17-8209 chr17 63715005 63715215 + 6.36 0.000 intron (NM_153335, intron 2 of 8) intron (NM_153335, intron 2 of 8) 14772 NR_046273 729683 Hs.534931 NR_046273 LOC729683 - uncharacterized LOC729683 ncRNA chr2-7879 chr2 53474829 53475039 + 6.36 0.000 Intergenic Intergenic -292849 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr16-4128 chr16 3648411 3648621 + 6.36 0.000 Intergenic Intergenic -4423 NM_005223 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr7-7852 chr7 5220456 5220666 + 6.36 0.000 intron (NM_016003, intron 6 of 11) intron (NM_016003, intron 6 of 11) 6292 NM_001033520 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr2-6099 chr2 197209301 197209511 + 6.36 0.000 intron (NM_153697, intron 1 of 9) intron (NM_153697, intron 1 of 9) 11415 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr1-7803 chr1 52783562 52783772 + 6.36 0.000 intron (NM_024646, intron 4 of 13) AluJb|SINE|Alu 57214 NM_024646 79699 Hs.476280 NM_024646 ENSG00000162378 ZYG11B ZYG11 zyg-11 family member B, cell cycle regulator protein-coding chr10-8394 chr10 83098307 83098517 + 6.36 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 578677 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr5-2662 chr5 16284328 16284538 + 6.36 0.000 Intergenic Intergenic 104192 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA chr3-8090 chr3 13466699 13466909 + 6.36 0.000 Intergenic LTR33A|LTR|ERVL 13249 NR_046690 100874101 Hs.535701 NR_046690 ENSG00000244502 HDAC11-AS1 - HDAC11 antisense RNA 1 ncRNA chrX-4215 chrX 37521033 37521243 + 6.36 0.000 Intergenic Intergenic -50523 NM_198511 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chr2-12601 chr2 70940774 70940984 + 6.36 0.000 intron (NM_001692, intron 1 of 13) AluJb|SINE|Alu 4979 NM_001692 525 Hs.64173 NM_001692 ENSG00000116039 ATP6V1B1 ATP6B1|RTA1B|VATB|VMA2|VPP3 ATPase H+ transporting V1 subunit B1 protein-coding chr8-6770 chr8 92540269 92540479 + 6.36 0.000 Intergenic Intergenic 115120 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr10-6776 chr10 1480600 1480810 + 6.36 0.000 intron (NM_018702, intron 1 of 9) AluY|SINE|Alu -45925 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr18-2457 chr18 36076173 36076383 + 6.36 0.000 Intergenic Intergenic -8684 NM_001303413 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr10-6102 chr10 132362816 132363026 + 6.36 0.000 intron (NM_001143757, intron 9 of 10) intron (NM_001143757, intron 9 of 10) 25581 NM_001309474 80313 Hs.119897 NM_030626 ENSG00000148814 LRRC27 - leucine rich repeat containing 27 protein-coding chrX-3826 chrX 150302049 150302259 + 6.36 0.000 Intergenic HAL1|LINE|L1 -61163 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr3-8872 chr3 10509227 10509437 + 6.36 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) -3746 NM_001683 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr2-11626 chr2 4491079 4491289 + 6.36 0.000 Intergenic Intergenic 165038 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr22-4040 chr22 41354616 41354826 + 6.36 0.000 intron (NM_017590, intron 17 of 22) intron (NM_017590, intron 17 of 22) -12612 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr1-15354 chr1 147371687 147371897 + 6.36 0.000 Intergenic Intergenic 128650 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr10-4231 chr10 124807206 124807416 + 6.36 0.000 intron (NM_032182, intron 2 of 8) AluY|SINE|Alu 5492 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr19-6378 chr19 12841037 12841247 + 6.36 0.000 intron (NM_014975, intron 3 of 25) intron (NM_014975, intron 3 of 25) 2627 NM_014975 22983 Hs.227489 NM_014975 ENSG00000105613 MAST1 MCCCHCM|SAST microtubule associated serine/threonine kinase 1 protein-coding chr5-8227 chr5 109438797 109439007 + 6.36 0.000 Intergenic L1MC5a|LINE|L1 -28928 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr2-7632 chr2 27258027 27258237 + 6.36 0.000 intron (NM_001318949, intron 4 of 8) intron (NM_001318949, intron 4 of 8) 4915 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr10-7788 chr10 36172721 36172931 + 6.36 0.000 Intergenic Intergenic 394524 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr7-7923 chr7 8151140 8151350 + 6.36 0.000 intron (NM_001350838, intron 6 of 11) intron (NM_001350838, intron 6 of 11) 110807 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr6-8093 chr6 125634425 125634635 + 6.36 0.000 Intergenic HERV16-int|LTR|ERVL -39823 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr13-2699 chr13 91018037 91018247 + 6.36 0.000 Intergenic Intergenic 71475 NR_104057 101930747 Hs.112745 NR_104057 LINC00380 - long intergenic non-protein coding RNA 380 ncRNA chr2-12365 chr2 51701449 51701659 + 6.36 0.000 intron (NR_135237, intron 5 of 10) intron (NR_135237, intron 5 of 10) 668953 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr19-5779 chr19 32198249 32198459 + 6.36 0.000 Intergenic Intergenic -92438 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LINC01782 - long intergenic non-protein coding RNA 1782 ncRNA chrX-4641 chrX 78745043 78745253 + 6.36 0.000 Intergenic Intergenic -2561 NM_001278000 2846 Hs.522701 NM_005296 ENSG00000147145 LPAR4 GPR23|LPA4|P2RY9|P2Y5-LIKE|P2Y9 lysophosphatidic acid receptor 4 protein-coding chr7-8449 chr7 47820866 47821076 + 6.36 0.000 intron (NM_138295, intron 46 of 56) intron (NM_138295, intron 46 of 56) 25680 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr11-6113 chr11 37042708 37042918 + 6.36 0.000 Intergenic L2c|LINE|L2 -444534 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr11-6627 chr11 74507265 74507475 + 6.36 0.000 Intergenic Intergenic -13646 NM_001144869 387787 Hs.591971 NM_001144869 ENSG00000175536 LIPT2 - lipoyl(octanoyl) transferase 2 protein-coding chr5-6077 chr5 10229303 10229513 + 6.36 0.000 intron (NR_047668, intron 3 of 3) L1MC4|LINE|L1 20480 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr18-3445 chr18 66644990 66645200 + 6.36 0.000 Intergenic Intergenic -41005 NR_073130 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr1-16308 chr1 216028244 216028454 + 6.36 0.000 intron (NM_206933, intron 32 of 71) AluSz|SINE|Alu -44116 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr5-6344 chr5 135702864 135703074 + 6.36 0.000 intron (NM_001349335, intron 3 of 10) intron (NM_001349335, intron 3 of 10) -49034 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr1-15359 chr1 147676424 147676634 + 6.36 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -6005 NR_136633 51205 Hs.562154 NM_016361 ENSG00000162836 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding chr1-12092 chr1 155466334 155466544 + 6.36 0.000 intron (NM_018489, intron 3 of 27) intron (NM_018489, intron 3 of 27) 33259 NR_034180 645682 Hs.632482 NR_034180 ENSG00000237872 POU5F1P4 OCT3|OCT4|OTF-3|OTF3|Oct-3|Oct-4|Oct4-pg4|POU5F1|POU5FLC1 POU class 5 homeobox 1 pseudogene 4 pseudo chr3-10712 chr3 153338625 153338835 + 6.36 0.000 Intergenic Intergenic -145765 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr20-1496 chr20 31514882 31515092 + 6.36 0.000 intron (NM_178580, intron 1 of 12) CpG 545 NM_178582 81502 Hs.373741 NM_030789 ENSG00000101294 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 histocompatibility minor 13 protein-coding chr5-6104 chr5 20362058 20362268 + 6.36 0.000 intron (NM_001349558, intron 1 of 15) intron (NM_001349558, intron 1 of 15) 56612 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA chr3-5874 chr3 36130327 36130537 + 6.36 0.000 Intergenic MER52-int|LTR|ERV1 -250055 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr7-5311 chr7 25710380 25710590 + 6.36 0.000 intron (NR_157808, intron 1 of 4) L1MD3|LINE|L1 -39754 NR_157816 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr1-13687 chr1 12565651 12565861 + 6.36 0.000 Intergenic AluJr|SINE|Alu 13267 NR_106788 102466722 NR_106788 ENSG00000276830 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA chr2-13498 chr2 149306190 149306400 + 6.36 0.000 Intergenic Intergenic -23690 NM_001195685 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr1-7694 chr1 22529430 22529640 + 6.36 0.000 3' UTR (NM_001330398, exon 16 of 16) 3' UTR (NM_001330398, exon 16 of 16) -33954 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr2-13683 chr2 164178942 164179152 + 6.36 0.000 Intergenic Intergenic 389448 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr3-4422 chr3 10691250 10691460 + 6.36 0.000 Intergenic Intergenic -64548 NR_046766 100874325 Hs.143004 NR_046766 ENSG00000224771 ATP2B2-IT2 - ATP2B2 intronic transcript 2 ncRNA chr13-3677 chr13 34357336 34357546 + 6.36 0.000 intron (NR_146542, intron 1 of 3) intron (NR_146542, intron 1 of 3) 9398 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr20-2260 chr20 2839140 2839350 + 6.36 0.000 exon (NM_022760, exon 3 of 8) exon (NM_022760, exon 3 of 8) 1410 NM_022760 64773 Hs.29341 NM_022760 ENSG00000132635 PCED1A C20orf81|FAM113A|bA12M19.1 PC-esterase domain containing 1A protein-coding chrX-3687 chrX 107737577 107737787 + 6.36 0.000 intron (NM_198057, intron 1 of 2) intron (NM_198057, intron 1 of 2) -20620 NM_004089 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr17-7514 chr17 17350354 17350564 + 6.36 0.000 Intergenic Intergenic 47086 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr15-3501 chr15 98734678 98734888 + 6.36 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) -49643 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr11-9479 chr11 62140850 62141060 + 6.36 0.000 exon (NM_020238, exon 10 of 18) exon (NM_020238, exon 10 of 18) 16944 NM_001040694 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr1-6354 chr1 7300043 7300253 + 6.36 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) 89606 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr5-3418 chr5 149938299 149938509 + 6.36 0.000 intron (NM_000440, intron 1 of 21) intron (NM_000440, intron 1 of 21) -5427 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr13-2147 chr13 106197662 106197872 + 6.36 0.000 Intergenic Intergenic -178797 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr11-9402 chr11 57704658 57704868 + 6.36 0.000 exon (NM_001317078, exon 3 of 5) exon (NM_001317078, exon 3 of 5) 7452 NR_157587 219541 Hs.43619 NM_153450 ENSG00000156603 MED19 DT2P1G7|LCMR1|MED19AS mediator complex subunit 19 protein-coding chr4-6968 chr4 20598298 20598508 + 6.36 0.000 intron (NM_001289135, intron 32 of 35) intron (NM_001289135, intron 32 of 35) 70128 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr1-13490 chr1 3821845 3822055 + 6.36 0.000 intron (NM_014704, intron 20 of 21) intron (NM_014704, intron 20 of 21) -25452 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 - leucine rich repeat containing 47 protein-coding chr19-4690 chr19 18109182 18109392 + 6.36 0.000 intron (NM_015016, intron 2 of 26) intron (NM_015016, intron 2 of 26) -10471 NM_001290024 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr2-12331 chr2 47867533 47867743 + 6.36 0.000 intron (NM_001190274, intron 1 of 22) intron (NM_001190274, intron 1 of 22) 21081 NM_025133 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr12-7074 chr12 42464822 42465032 + 6.36 0.000 exon (NM_153026, exon 7 of 8) exon (NM_153026, exon 7 of 8) 18688 NM_001144881 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr4-3349 chr4 3515508 3515718 + 6.36 0.000 intron (NM_002337, intron 6 of 7) intron (NM_002337, intron 6 of 7) 16536 NR_110005 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr1-15089 chr1 98650403 98650613 + 6.36 0.000 Intergenic MER52A|LTR|ERV1 -11213 NR_033716 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr8-3004 chr8 115648728 115648938 + 6.36 0.000 intron (NM_014112, intron 1 of 6) intron (NM_014112, intron 1 of 6) 19180 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr3-7621 chr3 20990417 20990627 + 6.36 0.000 Intergenic MER4B-int|LTR|ERV1 -415204 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr16-3580 chr16 69048702 69048912 + 6.36 0.000 intron (NM_024562, intron 17 of 17) intron (NM_024562, intron 17 of 17) -56846 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr18-1048 chr18 10142522 10142732 + 6.36 0.000 Intergenic Intergenic 228611 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr4-4528 chr4 67685390 67685600 + 6.36 0.000 intron (NM_018227, intron 2 of 32) MSTD-int|LTR|ERVL-MaLR 15660 NM_018227 55236 Hs.212774 NM_018227 ENSG00000033178 UBA6 E1-L2|MOP-4|UBE1L2 ubiquitin like modifier activating enzyme 6 protein-coding chrX-2712 chrX 121377656 121377866 + 6.36 0.000 Intergenic Intergenic 6789 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr10-8006 chr10 61502812 61503022 + 6.36 0.000 Intergenic Intergenic 22876 NR_120645 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA chr3-10673 chr3 150455605 150455815 + 6.36 0.000 intron (NR_130136, intron 3 of 4) intron (NR_130136, intron 3 of 4) 47412 NM_001303264 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr2-12682 chr2 75769366 75769576 + 6.36 0.000 Intergenic Intergenic -58556 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr15-1937 chr15 93387287 93387497 + 6.36 0.000 Intergenic Intergenic 181326 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr8-5701 chr8 125983181 125983391 + 6.36 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -32089 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr6-3571 chr6 63970465 63970675 + 6.36 0.000 intron (NM_001292009, intron 35 of 43) AluY|SINE|Alu 163734 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr1-9574 chr1 42942928 42943138 + 6.36 0.000 intron (NM_006516, intron 2 of 9) L3|LINE|CR1 15835 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr15-4652 chr15 64319396 64319606 + 6.36 0.000 intron (NM_001329606, intron 1 of 11) intron (NM_001329606, intron 1 of 11) 36672 NM_001329607 53944 Hs.646508 NM_022048 ENSG00000169118 CSNK1G1 CK1gamma1 casein kinase 1 gamma 1 protein-coding chr12-5801 chr12 17301496 17301706 + 6.36 0.000 Intergenic HERVE-int|LTR|ERV1 287477 NR_146522 105369678 NR_146522 LINC02378 - long intergenic non-protein coding RNA 2378 ncRNA chr9-4714 chr9 127403270 127403480 + 6.36 0.000 intron (NM_014580, intron 5 of 9) intron (NM_014580, intron 5 of 9) 6206 NM_014580 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr17-7684 chr17 31155366 31155576 + 6.36 0.000 intron (NM_001042492, intron 1 of 57) intron (NM_001042492, intron 1 of 57) 60494 NM_001128147 4763 Hs.113577 NM_000267 ENSG00000196712 NF1 NFNS|VRNF|WSS neurofibromin 1 protein-coding chr4-5925 chr4 148562930 148563140 + 6.36 0.000 Intergenic MIRb|SINE|MIR -118337 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chrX-2450 chrX 81368478 81368688 + 6.36 0.000 Intergenic MamRep38|DNA|hAT 166481 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr13-2477 chr13 51172642 51172852 + 6.36 0.000 promoter-TSS (NR_102432) promoter-TSS (NR_102432) -359 NR_102431 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chrX-2285 chrX 51243313 51243523 + 6.36 0.000 Intergenic L1M2|LINE|L1 -71997 NR_110382 101926971 Hs.657995 NR_110382 ENSG00000230317 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA chr21-1211 chr21 44836518 44836728 + 6.36 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -18494 NM_001286416 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr11-9136 chr11 33912842 33913052 + 6.36 0.000 Intergenic Intergenic -20871 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr8-5874 chr8 14967697 14967907 + 6.36 0.000 intron (NM_139167, intron 1 of 7) L2a|LINE|L2 -114292 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr3-10609 chr3 145127854 145128064 + 6.36 0.000 Intergenic Intergenic 941226 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr17-7931 chr17 44805571 44805781 + 6.36 0.000 exon (NM_005497, exon 3 of 3) exon (NM_005497, exon 3 of 3) 24611 NM_005497 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr20-2736 chr20 50054847 50055057 + 6.36 0.000 Intergenic Intergenic -13323 NR_051976 100887755 Hs.195705 NR_051976 TRERNA1 LINC00651|treRNA translation regulatory long non-coding RNA 1 ncRNA chr14-2271 chr14 28436888 28437098 + 6.36 0.000 Intergenic L1ME4a|LINE|L1 328326 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr9-7828 chr9 82677962 82678172 + 6.36 0.000 Intergenic LTR33C|LTR|ERVL 385075 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr2-11763 chr2 11968092 11968302 + 6.36 0.000 Intergenic Intergenic -38919 NR_110197 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr6-7064 chr6 28217870 28218080 + 6.36 0.000 non-coding (NR_002936, exon 1 of 1) non-coding (NR_002936, exon 1 of 1) 954 NR_002936 222699 Hs.161441 NR_002936 TOB2P1 TOB2P|TOB4p|p373c6.3 transducer of ERBB2, 2 pseudogene 1 pseudo chrX-984 chrX 153671941 153672151 + 6.36 0.000 intron (NM_001039582, intron 4 of 11) intron (NM_001039582, intron 4 of 11) 1242 NM_001135740 139728 Hs.436667 NM_198452 ENSG00000130822 PNCK BSTK3|CaMK1b pregnancy up-regulated nonubiquitous CaM kinase protein-coding chr14-3716 chr14 20792562 20792772 + 6.36 0.000 Intergenic MSTD|LTR|ERVL-MaLR 9697 NM_198232 6035 Hs.78224 NM_002933 ENSG00000129538 RNASE1 RAC1|RIB1|RNS1 ribonuclease A family member 1, pancreatic protein-coding chr18-2282 chr18 76573374 76573584 + 6.36 0.000 Intergenic Intergenic 44824 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chr12-3210 chr12 55392162 55392372 + 6.36 0.000 Intergenic MER52A|LTR|ERV1 -8262 NM_001005518 403282 Hs.554553 NM_001005518 ENSG00000205328 OR6C65 - olfactory receptor family 6 subfamily C member 65 protein-coding chr4-4276 chr4 24256125 24256335 + 6.36 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) 216675 NR_148987 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr12-7041 chr12 39245070 39245280 + 6.36 0.000 Intergenic MIR3|SINE|MIR 197945 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr16-3111 chr16 68972881 68973091 + 6.36 0.000 intron (NM_024562, intron 14 of 17) L2a|LINE|L2 129455 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chrX-1621 chrX 114613724 114613934 + 6.36 0.000 5' UTR (NM_000868, exon 2 of 6) 5' UTR (NM_000868, exon 2 of 6) -16968 NR_002993 677816 Hs.693123 NR_002993 ENSG00000208839 SNORA35 HBI-36|SNORA35A small nucleolar RNA, H/ACA box 35 snoRNA chr7-6280 chr7 137146632 137146842 + 6.36 0.000 intron (NR_046103, intron 1 of 3) intron (NR_046103, intron 1 of 3) 17604 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA chr10-4597 chr10 113473915 113474125 + 6.36 0.000 Intergenic Intergenic -76811 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr4-8051 chr4 120982282 120982492 + 6.36 0.000 Intergenic L1MC4a|LINE|L1 -59521 NM_001300823 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr16-3425 chr16 86761704 86761914 + 6.36 0.000 Intergenic Intergenic 39718 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr9-6919 chr9 93308049 93308259 + 6.36 0.000 intron (NM_006648, intron 26 of 28) intron (NM_006648, intron 26 of 28) 38149 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr2-12418 chr2 56306017 56306227 + 6.36 0.000 intron (NM_001348516, intron 2 of 2) intron (NM_001348516, intron 2 of 2) -120352 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr4-4917 chr4 123506591 123506801 + 6.36 0.000 Intergenic Intergenic 107156 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr15-5084 chr15 87090229 87090439 + 6.36 0.000 Intergenic Intergenic -101908 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA chr21-1913 chr21 44890544 44890754 + 6.36 0.000 intron (NM_001303238, intron 11 of 15) intron (NM_001303238, intron 11 of 15) -16746 NR_104597 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF PTTG1 interacting protein protein-coding chr11-10214 chr11 97663793 97664003 + 6.36 0.000 Intergenic L2a|LINE|L2 1155473 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr7-9554 chr7 141268955 141269165 + 6.36 0.000 intron (NM_001195278, intron 2 of 3) HSMAR2|DNA|TcMar-Mariner 194996 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chrX-2388 chrX 71210827 71211037 + 6.36 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -4280 NM_001097642 2705 Hs.333303 NM_000166 ENSG00000169562 GJB1 CMTX|CMTX1|CX32 gap junction protein beta 1 protein-coding chr1-11988 chr1 88518994 88519204 + 6.36 0.000 Intergenic Intergenic -165045 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr16-4874 chr16 88622704 88622914 + 6.36 0.000 intron (NM_001294340, intron 10 of 18) intron (NM_001294340, intron 10 of 18) -15763 NM_013278 27189 Hs.278911 NM_013278 ENSG00000124391 IL17C CX2|IL-17C interleukin 17C protein-coding chr4-6995 chr4 23039779 23039989 + 6.36 0.000 Intergenic MLT2B4|LTR|ERVL 325795 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr3-10354 chr3 128024420 128024630 + 6.36 0.000 Intergenic Intergenic -27912 NM_013336 29927 Hs.518236 NM_013336 ENSG00000058262 SEC61A1 HNFJ4|HSEC61|SEC61|SEC61A SEC61 translocon alpha 1 subunit protein-coding chr8-5721 chr8 132528040 132528250 + 6.36 0.000 Intergenic Intergenic 33334 NR_026684 93668 Hs.545218 NR_026684 ENSG00000253521 HPYR1 HPRG1|LINC00027|NCRNA00027 Helicobacter pylori responsive 1 ncRNA chr17-5424 chr17 35130430 35130640 + 6.36 0.000 TTS (NM_001014445) TTS (NM_001014445) 8920 NM_017559 54752 Hs.120369 NM_017559 ENSG00000073598 FNDC8 - fibronectin type III domain containing 8 protein-coding chr13-2850 chr13 109811161 109811371 + 6.36 0.000 Intergenic Intergenic -24683 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr15-3556 chr15 26454874 26455084 + 6.36 0.000 Intergenic Intergenic 174111 NR_103801 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr15-5290 chr15 101085561 101085771 + 6.36 0.000 Intergenic AluSp|SINE|Alu 166309 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr20-2599 chr20 38615751 38615961 + 6.36 0.000 intron (NM_001164431, intron 1 of 14) intron (NM_001164431, intron 1 of 14) 14047 NM_001164431 343578 NM_001164431 ENSG00000124143 ARHGAP40 C20orf95|dJ1100H13.4 Rho GTPase activating protein 40 protein-coding chr9-8045 chr9 96122548 96122758 + 6.36 0.000 Intergenic Intergenic -6242 NR_132344 158434 Hs.381771 NM_001256408 ENSG00000275465 LOC158434 - uncharacterized LOC158434 ncRNA chr6-7817 chr6 100826868 100827078 + 6.36 0.000 intron (NM_006828, intron 4 of 41) MER3|DNA|hAT-Charlie 54356 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr1-11693 chr1 7376545 7376755 + 6.36 0.000 intron (NM_001349608, intron 4 of 21) MIRc|SINE|MIR 13104 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr11-7941 chr11 3188959 3189169 + 6.36 0.000 Intergenic AluJb|SINE|Alu -23754 NM_145638 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr10-6037 chr10 126892253 126892463 + 6.36 0.000 Intergenic Intergenic -13051 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr20-4127 chr20 42470494 42470704 + 6.36 0.000 intron (NM_133170, intron 8 of 31) intron (NM_133170, intron 8 of 31) -214884 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr15-5172 chr15 92735891 92736101 + 6.36 0.000 Intergenic MIRb|SINE|MIR -59488 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr20-2938 chr20 7363874 7364084 + 6.36 0.000 intron (NR_110610, intron 2 of 2) THE1B-int|LTR|ERVL-MaLR -7629 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chr1-13870 chr1 21280712 21280922 + 6.36 0.000 intron (NM_001113348, intron 2 of 18) intron (NM_001113348, intron 2 of 18) -1202 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr15-2485 chr15 96605113 96605323 + 6.36 0.000 Intergenic L2c|LINE|L2 176436 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr1-16616 chr1 238669607 238669817 + 6.36 0.000 Intergenic AluY|SINE|Alu -183695 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr12-6896 chr12 22893093 22893303 + 6.36 0.000 Intergenic Intergenic 268027 NM_001039481 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr6-8470 chr6 155660060 155660270 + 6.36 0.000 Intergenic Intergenic 145321 NR_134597 105378068 Hs.131541 NR_134596 LOC105378068 - uncharacterized LOC105378068 ncRNA chr1-5635 chr1 23772010 23772220 + 6.36 0.000 non-coding (NR_038280, exon 3 of 4) non-coding (NR_038280, exon 3 of 4) 6182 NR_038280 100506963 Hs.592549 NR_038280 ENSG00000236810 ELOA-AS1 TCEB3-AS1 ELOA antisense RNA 1 ncRNA chr7-6668 chr7 140285961 140286171 + 6.36 0.000 Intergenic Intergenic 108805 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr5-5974 chr5 121147753 121147963 + 6.36 0.000 Intergenic L1PA15|LINE|L1 -174692 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr7-6504 chr7 18162349 18162559 + 6.36 0.000 intron (NM_001321872, intron 2 of 11) intron (NM_001321872, intron 2 of 11) -35145 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr14-3512 chr14 103257108 103257318 + 6.36 0.000 Intergenic LTR8|LTR|ERV1 -60071 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr18-3085 chr18 33872677 33872887 + 6.36 0.000 intron (NM_001353232, intron 9 of 9) MER3|DNA|hAT-Charlie 175830 NM_001353236 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr7-6423 chr7 157204621 157204831 + 6.36 0.000 intron (NM_014671, intron 11 of 22) intron (NM_014671, intron 11 of 22) 65800 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr14-3264 chr14 78892558 78892768 + 6.36 0.000 intron (NM_004796, intron 7 of 16) intron (NM_004796, intron 7 of 16) -307319 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr16-6254 chr16 30449898 30450108 + 6.36 0.000 Intergenic Intergenic -4129 NM_012248 22928 Hs.118725 NM_012248 ENSG00000179918 SEPHS2 SPS2 selenophosphate synthetase 2 protein-coding chr2-5662 chr2 199459298 199459508 + 6.36 0.000 intron (NM_015265, intron 2 of 11) CpG-16887 -1464 NM_001172509 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr14-4702 chr14 58166441 58166651 + 6.36 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -14333 NM_001320173 145407 Hs.26766 NM_001001872 ENSG00000139971 ARMH4 C14orf37|UT2|c14_5376 armadillo like helical domain containing 4 protein-coding chr15-3259 chr15 76006320 76006530 + 6.36 0.000 intron (NM_138573, intron 3 of 5) intron (NM_138573, intron 3 of 5) 5999 NM_138573 145957 Hs.732438 NM_138573 ENSG00000169752 NRG4 HRG4 neuregulin 4 protein-coding chr10-3844 chr10 6001958 6002168 + 6.36 0.000 Intergenic AluSz6|SINE|Alu -23322 NM_001351095 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr8-4312 chr8 98372633 98372843 + 6.36 0.000 Intergenic Intergenic 21000 NR_162095 113218497 NR_162095 MIR9903 - microRNA 9903 ncRNA chr2-12599 chr2 70930091 70930301 + 6.36 0.000 intron (NM_012476, intron 2 of 2) AluJo|SINE|Alu -5704 NM_001692 525 Hs.64173 NM_001692 ENSG00000116039 ATP6V1B1 ATP6B1|RTA1B|VATB|VMA2|VPP3 ATPase H+ transporting V1 subunit B1 protein-coding chr17-7003 chr17 51418058 51418268 + 6.36 0.000 Intergenic L2c|LINE|L2 -17264 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr20-2159 chr20 40856338 40856548 + 6.36 0.000 Intergenic L2b|LINE|L2 -124270 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr18-1770 chr18 10407605 10407815 + 6.36 0.000 intron (NR_110775, intron 1 of 2) intron (NR_110775, intron 1 of 2) 6660 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr7-9709 chr7 155740842 155741052 + 6.36 0.000 intron (NM_053043, intron 12 of 17) intron (NM_053043, intron 12 of 17) 68125 NR_132318 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr10-5603 chr10 93620848 93621058 + 6.36 0.000 exon (NM_006204, exon 3 of 22) exon (NM_006204, exon 3 of 22) 8416 NM_006204 5146 Hs.658121 NM_006204 ENSG00000095464 PDE6C ACHM5|COD4|PDEA2 phosphodiesterase 6C protein-coding chr5-5059 chr5 92470097 92470307 + 6.36 0.000 Intergenic Intergenic -1086885 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr4-8496 chr4 160002706 160002916 + 6.36 0.000 Intergenic L1PA7|LINE|L1 -225027 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr2-6680 chr2 18158795 18159005 + 6.36 0.000 Intergenic Intergenic 280233 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr11-7172 chr11 129410753 129410963 + 6.36 0.000 intron (NM_003658, intron 1 of 3) intron (NM_003658, intron 1 of 3) 35010 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr2-4850 chr2 86393621 86393831 + 6.36 0.000 Intergenic ERVL-E-int|LTR|ERVL -47645 NM_018433 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr20-1504 chr20 34644290 34644500 + 6.36 0.000 intron (NM_080476, intron 3 of 11) intron (NM_080476, intron 3 of 11) 32890 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr7-9372 chr7 130561271 130561481 + 6.36 0.000 intron (NM_001290033, intron 11 of 19) intron (NM_001290033, intron 11 of 19) 17923 NR_024086 53844 Hs.6421 NR_024086 COPG2IT1 CIT1|COPG2AS|DKFZP761N09121|NCRNA00170 COPG2 imprinted transcript 1 ncRNA chr6-6074 chr6 142266223 142266433 + 6.36 0.000 Intergenic LTR16B|LTR|ERVL -35591 NM_001032394 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr4-6242 chr4 65538213 65538423 + 6.36 0.000 intron (NM_001281767, intron 3 of 16) intron (NM_001281767, intron 3 of 16) 131170 NM_001318761 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr9-6170 chr9 78714774 78714984 + 6.36 0.000 Intergenic Intergenic 417754 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr10-8517 chr10 91359922 91360132 + 6.36 0.000 intron (NR_024467, intron 3 of 4) LTR16A|LTR|ERVL -49208 NM_001348365 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr13-3068 chr13 40316950 40317160 + 6.36 0.000 Intergenic L2a|LINE|L2 -96553 NR_033877 400123 Hs.577960 NR_033877 ENSG00000215483 LINC00548 - long intergenic non-protein coding RNA 548 ncRNA chr9-8718 chr9 131740271 131740481 + 6.36 0.000 promoter-TSS (NM_001304275) promoter-TSS (NM_001304275) -432 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr8-6842 chr8 98520533 98520743 + 6.36 0.000 intron (NM_006281, intron 10 of 10) intron (NM_006281, intron 10 of 10) 93680 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr10-7443 chr10 6892891 6893101 + 6.36 0.000 Intergenic UCON86|LINE|L2 113398 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr7-5905 chr7 96625238 96625448 + 6.36 0.000 intron (NR_038948, intron 4 of 4) intron (NR_038948, intron 4 of 4) 38995 NR_038948 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr2-12191 chr2 41693269 41693479 + 6.36 0.000 Intergenic Intergenic -184181 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr7-6168 chr7 128113935 128114145 + 6.36 0.000 Intergenic Intergenic 32179 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr22-3999 chr22 39435636 39435846 + 6.36 0.000 non-coding (NR_040535, exon 3 of 3) non-coding (NR_040535, exon 3 of 3) 3581 NR_040535 100506472 Hs.729080 NR_040535 LOC100506472 - uncharacterized LOC100506472 ncRNA chr10-6578 chr10 79331907 79332117 + 6.36 0.000 Intergenic Intergenic -15457 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr3-10029 chr3 103089690 103089900 + 6.36 0.000 Intergenic L1MA4A|LINE|L1 434321 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr5-3953 chr5 4883278 4883488 + 6.36 0.000 Intergenic Intergenic 109902 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA chr9-6215 chr9 106491764 106491974 + 6.36 0.000 Intergenic LTR1A2|LTR|ERV1 -109059 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr1-14407 chr1 44609568 44609778 + 6.36 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 61383 NR_145816 109623472 NR_145816 SNORD145 - small nucleolar RNA, C/D box 145 snoRNA chr5-4908 chr5 72126421 72126631 + 6.36 0.000 intron (NM_005909, intron 2 of 6) MER103C|DNA|hAT-Charlie 19051 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr7-8481 chr7 50217184 50217394 + 6.36 0.000 Intergenic Intergenic -86775 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr11-6635 chr11 74663138 74663348 + 6.36 0.000 Intergenic L1MEc|LINE|L1 48124 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr8-4886 chr8 71690997 71691207 + 6.36 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -143008 NM_001370336 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr2-14367 chr2 218994930 218995140 + 6.36 0.000 Intergenic MIRb|SINE|MIR -1613 NM_057093 1412 Hs.415790 NM_057093 ENSG00000163499 CRYBA2 CTRCT42 crystallin beta A2 protein-coding chr17-7875 chr17 42887921 42888131 + 6.36 0.000 intron (NR_027254, intron 2 of 5) AluY|SINE|Alu 10708 NR_027254 388387 Hs.632257 NM_207388 ENSG00000213373 LINC00671 - long intergenic non-protein coding RNA 671 ncRNA chr1-16498 chr1 229710744 229710954 + 6.36 0.000 Intergenic L1MEc|LINE|L1 84602 NM_014777 9816 Hs.533628 NM_014777 ENSG00000135763 URB2 KIAA0133|NET10|NPA2 URB2 ribosome biogenesis homolog protein-coding chr19-4260 chr19 57348153 57348363 + 6.36 0.000 Intergenic AluJr|SINE|Alu -3016 NM_001329456 57343 Hs.287374 NM_020657 ENSG00000131845 ZNF304 - zinc finger protein 304 protein-coding chr8-5926 chr8 18544769 18544979 + 6.36 0.000 intron (NM_015310, intron 15 of 15) intron (NM_015310, intron 15 of 15) 153592 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr3-9347 chr3 46473572 46473782 + 6.36 0.000 intron (NM_001321122, intron 1 of 19) MLT1D|LTR|ERVL-MaLR -8772 NM_001321121 4057 Hs.529517 NM_002343 ENSG00000012223 LTF GIG12|HEL110|HLF2|LF lactotransferrin protein-coding chr9-7708 chr9 72834548 72834758 + 6.36 0.000 intron (NM_138691, intron 23 of 23) HAL1|LINE|L1 39456 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr2-10964 chr2 87488667 87488877 + 6.36 0.000 intron (NR_024204, intron 3 of 3) AluSz6|SINE|Alu 18822 NR_146460 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr12-6398 chr12 72296381 72296591 + 6.36 0.000 intron (NM_013381, intron 2 of 18) intron (NM_013381, intron 2 of 18) -22977 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr10-5040 chr10 35471457 35471667 + 6.36 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) -133779 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding chr7-9480 chr7 135757889 135758099 + 6.36 0.000 Intergenic Intergenic -9181 NM_001369697 389558 Hs.55200 NM_205855 ENSG00000189320 FAM180A UNQ1940 family with sequence similarity 180 member A protein-coding chr6-7456 chr6 56042830 56043040 + 6.36 0.000 Intergenic L1ME2|LINE|L1 48727 NM_001318753 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr3-5044 chr3 37815484 37815694 + 6.36 0.000 intron (NM_002207, intron 27 of 27) AluSz|SINE|Alu 46191 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr11-9096 chr11 31900447 31900657 + 6.36 0.000 Intergenic L4_C_Mam|LINE|RTE-X 73985 NR_117094 103157000 NR_117094 ENSG00000281880 PAUPAR - PAX6 upstream antisense RNA ncRNA chr7-6618 chr7 106019627 106019837 + 6.36 0.000 intron (NM_152750, intron 12 of 18) MamSINE1|SINE|tRNA-RTE 56468 NM_001301161 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr2-8043 chr2 71726027 71726237 + 6.36 0.000 Intergenic Intergenic 259433 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr11-5413 chr11 68168231 68168441 + 6.36 0.000 intron (NR_161380, intron 10 of 10) intron (NR_161380, intron 10 of 10) 44960 NM_001369424 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr2-10555 chr2 238614384 238614594 + 6.36 0.000 Intergenic (TCCA)n|Simple_repeat|Simple_repeat -58990 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr22-2812 chr22 43091610 43091820 + 6.36 0.000 Intergenic L1MB2|LINE|L1 -2287 NR_027779 25809 Hs.660298 NM_012263 ENSG00000100271 TTLL1 C22orf7|HS323M22B tubulin tyrosine ligase like 1 protein-coding chr15-3642 chr15 81116957 81117167 + 6.36 0.000 Intergenic MER101-int|LTR|ERV1 -17208 NM_173528 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr9-4615 chr9 108049093 108049303 + 6.36 0.000 Intergenic Intergenic -559429 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr4-4178 chr4 10045621 10045831 + 6.36 0.000 Intergenic Intergenic -5478 NM_001001290 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr16-5084 chr16 84306364 84306574 + 6.36 0.000 intron (NM_001282467, intron 1 of 6) intron (NM_001282467, intron 1 of 6) 11591 NM_001282467 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr8-6257 chr8 41190065 41190275 + 6.36 0.000 Intergenic Intergenic 80973 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chrX-4018 chrX 17060472 17060682 + 6.36 0.000 intron (NM_001080975, intron 8 of 17) L2b|LINE|L2 113919 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr7-6387 chr7 152020135 152020345 + 6.36 0.000 TTS (NR_033169) TTS (NR_033169) -5434 NM_001371473 chr19-3752 chr19 50357285 50357495 + 6.36 0.000 Intergenic Intergenic 8249 NM_004851 9476 Hs.512843 NM_004851 ENSG00000131400 NAPSA KAP|Kdap|NAP1|NAPA|SNAPA napsin A aspartic peptidase protein-coding chr14-4798 chr14 66141880 66142090 + 6.36 0.000 Intergenic L1PA13|LINE|L1 -344386 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr8-4882 chr8 69657465 69657675 + 6.36 0.000 intron (NR_132437, intron 16 of 16) L1MC4|LINE|L1 64670 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr3-7108 chr3 182504615 182504825 + 6.36 0.000 intron (NR_134941, intron 1 of 3) intron (NR_134941, intron 1 of 3) 2404 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr7-6473 chr7 3779291 3779501 + 6.36 0.000 intron (NM_152744, intron 4 of 44) intron (NM_152744, intron 4 of 44) -350289 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr22-2676 chr22 36722814 36723024 + 6.36 0.000 intron (NR_134623, intron 1 of 3) intron (NR_134623, intron 1 of 3) 19043 NR_134623 105373021 Hs.401697 NR_134623 LOC105373021 - uncharacterized LOC105373021 ncRNA chrX-2620 chrX 108312667 108312877 + 6.36 0.000 intron (NM_001287758, intron 2 of 45) OldhAT1|DNA|hAT-Ac 125650 NM_033641 1288 Hs.145586 NM_001847 ENSG00000197565 COL4A6 CXDELq22.3|DELXq22.3|DFNX6 collagen type IV alpha 6 chain protein-coding chr15-5286 chr15 101059392 101059602 + 6.36 0.000 intron (NM_024652, intron 29 of 33) L1MC5|LINE|L1 140140 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr12-6190 chr12 20142495 20142705 + 6.36 0.000 Intergenic Intergenic -14699 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr16-6817 chr16 80755171 80755381 + 6.36 0.000 intron (NM_152342, intron 1 of 6) intron (NM_152342, intron 1 of 6) 49322 NM_152342 124359 Hs.60257 NM_152342 ENSG00000166446 CDYL2 PCCP1 chromodomain Y like 2 protein-coding chr11-5614 chr11 117690910 117691120 + 6.36 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 106201 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr10-7022 chr10 78056995 78057205 + 6.36 0.000 TTS (NM_001142285) TTS (NM_001142285) 23237 NM_001142285 6229 Hs.280130 NM_001026 ENSG00000138326 RPS24 DBA3|S24|eS24 ribosomal protein S24 protein-coding chr13-2812 chr13 102645373 102645583 + 6.36 0.000 intron (NM_001330588, intron 19 of 29) intron (NM_001330588, intron 19 of 29) 48492 NM_003291 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr19-6142 chr19 4159758 4159968 + 6.36 0.000 intron (NM_001271996, intron 4 of 9) MIR1_Amn|SINE|MIR 6232 NM_001271996 84699 Hs.247744 NM_032607 ENSG00000060566 CREB3L3 CREB-H|CREBH|HYST1481 cAMP responsive element binding protein 3 like 3 protein-coding chrX-3695 chrX 110223494 110223704 + 6.36 0.000 intron (NM_001025580, intron 1 of 4) intron (NM_001025580, intron 1 of 4) 1461 NR_004379 692226 NR_004379 ENSG00000208883 SNORD96B U96b small nucleolar RNA, C/D box 96B snoRNA chr16-5320 chr16 75488051 75488261 + 6.36 0.000 intron (NR_163481, intron 1 of 2) intron (NR_163481, intron 1 of 2) 7285 NM_021615 4166 Hs.655622 NM_021615 ENSG00000183196 CHST6 C-GlcNAc6ST|GST4-beta|MCDC1|glcNAc6ST-5|gn6st-5|hCGn6ST carbohydrate sulfotransferase 6 protein-coding chr13-3927 chr13 58651782 58651992 + 6.36 0.000 Intergenic Intergenic -418770 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr16-6717 chr16 72203450 72203660 + 6.36 0.000 Intergenic LTR67B|LTR|ERVL -31105 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr9-6492 chr9 97056375 97056585 + 6.36 0.000 Intergenic MER21-int|LTR|ERVL -16837 NM_001201575 1515 Hs.610096 NM_001333 ENSG00000136943 CTSV CATL2|CTSL2|CTSU cathepsin V protein-coding chr6-4026 chr6 125598429 125598639 + 6.36 0.000 Intergenic L2c|LINE|L2 -75819 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chrX-2829 chrX 136767343 136767553 + 6.36 0.000 5' UTR (NM_001306177, exon 1 of 21) 5' UTR (NM_001306177, exon 1 of 21) 367 NM_001306177 9459 Hs.522795 NM_004840 ENSG00000129675 ARHGEF6 COOL2|Cool-2|MRX46|PIXA|alpha-PIX|alphaPIX Rac/Cdc42 guanine nucleotide exchange factor 6 protein-coding chr14-5085 chr14 86412517 86412727 + 6.36 0.000 Intergenic Intergenic 477944 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr5-6448 chr5 167210253 167210463 + 6.36 0.000 intron (NM_001122679, intron 1 of 29) intron (NM_001122679, intron 1 of 29) -41957 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr9-7489 chr9 29719537 29719747 + 6.36 0.000 Intergenic Intergenic -506041 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr7-9110 chr7 106898127 106898337 + 6.36 0.000 intron (NM_001282426, intron 10 of 10) L1PA14|LINE|L1 32753 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr15-4962 chr15 78909040 78909250 + 6.36 0.000 Intergenic AluYh3|SINE|Alu 35953 NM_004390 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr4-3242 chr4 75894679 75894889 + 6.36 0.000 intron (NM_006239, intron 2 of 16) intron (NM_006239, intron 2 of 16) 7668 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr2-12699 chr2 77497791 77498001 + 6.36 0.000 intron (NR_146416, intron 1 of 1) MIRb|SINE|MIR 24480 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr5-5590 chr5 150353242 150353452 + 6.36 0.000 Intergenic Intergenic -4292 NM_001135243 6949 Hs.519672 NM_000356 ENSG00000070814 TCOF1 MFD1|TCS|TCS1|treacle treacle ribosome biogenesis factor 1 protein-coding chr10-4153 chr10 84891065 84891275 + 6.36 0.000 Intergenic Intergenic 307735 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr16-5265 chr16 53380496 53380706 + 6.36 0.000 intron (NR_119378, intron 2 of 2) MLT1B|LTR|ERVL-MaLR 7108 NR_119378 102723373 Hs.569678 NR_119378 ENSG00000261804 LOC102723373 - uncharacterized LOC102723373 ncRNA chr14-4185 chr14 85623201 85623411 + 6.36 0.000 exon (NM_001346145, exon 2 of 2) exon (NM_001346145, exon 2 of 2) 89957 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr1-15771 chr1 174626209 174626419 + 6.36 0.000 intron (NM_001366446, intron 13 of 25) intron (NM_001366446, intron 13 of 25) -74225 NM_001366451 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr16-4732 chr16 84163705 84163915 + 6.36 0.000 intron (NM_178452, intron 6 of 11) L1MB7|LINE|L1 4770 NM_001318756 123872 Hs.310164 NM_178452 ENSG00000154099 DNAAF1 CILD13|LRRC50|ODA7|swt dynein axonemal assembly factor 1 protein-coding chr11-9898 chr11 74772880 74773090 + 6.36 0.000 intron (NM_001098638, intron 1 of 5) intron (NM_001098638, intron 1 of 5) 24136 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr5-7386 chr5 22687011 22687221 + 6.36 0.000 intron (NM_004061, intron 1 of 14) AluSc5|SINE|Alu 166228 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr10-3347 chr10 13950247 13950457 + 6.36 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 21544 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr15-5268 chr15 99060949 99061159 + 6.36 0.000 Intergenic L1ME3G|LINE|L1 -44026 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr5-7653 chr5 52839990 52840200 + 6.36 0.000 intron (NM_181501, intron 1 of 28) intron (NM_181501, intron 1 of 28) 52179 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr10-9084 chr10 125494266 125494476 + 6.36 0.000 Intergenic Intergenic -80000 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr7-5158 chr7 6282744 6282954 + 6.36 0.000 Intergenic AluY|SINE|Alu -10225 NM_001367581 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr7-8752 chr7 77651727 77651937 + 6.36 0.000 Intergenic Intergenic 44433 NR_134251 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chrX-3130 chrX 11461326 11461536 + 6.36 0.000 intron (NR_109776, intron 1 of 14) L2b|LINE|L2 -33613 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr20-3942 chr20 33517024 33517234 + 6.36 0.000 intron (NM_001032999, intron 1 of 10) intron (NM_001032999, intron 1 of 10) 27033 NM_001032999 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr13-4031 chr13 73083675 73083885 + 6.36 0.000 Intergenic AluSx1|SINE|Alu 24775 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr19-4840 chr19 37846062 37846272 + 6.36 0.000 intron (NR_040015, intron 2 of 5) intron (NR_040015, intron 2 of 5) 9029 NR_040015 100631378 Hs.726940 NR_040015 ENSG00000225868 LOC100631378 - uncharacterized 100631378 ncRNA chr16-3798 chr16 35749232 35749442 + 6.36 0.000 intron (NR_033985, intron 2 of 2) 5S|rRNA|rRNA 2785 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA chr2-13716 chr2 167082075 167082285 + 6.36 0.000 intron (NM_152381, intron 2 of 10) L1PA2|LINE|L1 58775 NR_046665 100874011 NR_046665 XIRP2-AS1 - XIRP2 antisense RNA 1 ncRNA chr3-8901 chr3 12364415 12364625 + 6.36 0.000 intron (NM_015869, intron 1 of 6) L1MC1|LINE|L1 13018 NM_015869 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr15-5200 chr15 94362846 94363056 + 6.36 0.000 intron (NM_018349, intron 9 of 21) intron (NM_018349, intron 9 of 21) 7021 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr17-5713 chr17 56793752 56793962 + 6.36 0.000 intron (NM_001085430, intron 7 of 7) intron (NM_001085430, intron 7 of 7) 40063 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr8-6989 chr8 108167892 108168102 + 6.36 0.000 Intergenic L1PA3|LINE|L1 80720 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr4-2608 chr4 136529002 136529212 + 6.36 0.000 Intergenic MIR|SINE|MIR -615427 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr2-6713 chr2 26921342 26921552 + 6.36 0.000 intron (NM_020134, intron 2 of 12) intron (NM_020134, intron 2 of 12) -49190 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr8-2828 chr8 128118793 128119003 + 6.36 0.000 Intergenic SVA_D|Retroposon|SVA -31218 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr2-7158 chr2 201622904 201623114 + 6.36 0.000 3' UTR (NM_152388, exon 12 of 12) 3' UTR (NM_152388, exon 12 of 12) -3831 NM_001168216 151254 Hs.335788 NM_152525 ENSG00000155754 C2CD6 ALS2CR11 C2 calcium dependent domain containing 6 protein-coding chr18-1902 chr18 31630691 31630901 + 6.36 0.000 intron (NM_001330570, intron 5 of 7) intron (NM_001330570, intron 5 of 7) 39029 NM_000371 7276 Hs.427202 NM_000371 ENSG00000118271 TTR ATTR|CTS|CTS1|HEL111|HsT2651|PALB|TBPA transthyretin protein-coding chr4-7793 chr4 97121290 97121500 + 6.36 0.000 Intergenic Intergenic -245531 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr6-8256 chr6 138538859 138539069 + 6.36 0.000 intron (NM_020464, intron 1 of 6) intron (NM_020464, intron 1 of 6) 33605 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr7-7882 chr7 6129565 6129775 + 6.36 0.000 intron (NM_032172, intron 3 of 17) AluSx|SINE|Alu 24721 NM_001365764 84132 Hs.31856 NM_032172 ENSG00000106346 USP42 - ubiquitin specific peptidase 42 protein-coding chr4-6260 chr4 74761784 74761994 + 6.36 0.000 intron (NM_001316963, intron 2 of 4) L2a|LINE|L2 32634 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr15-3547 chr15 101387910 101388120 + 6.36 0.000 intron (NM_138325, intron 9 of 13) intron (NM_138325, intron 9 of 13) 53578 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr20-2862 chr20 62473223 62473433 + 6.36 0.000 intron (NM_080473, intron 3 of 6) intron (NM_080473, intron 3 of 6) 2667 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr13-2236 chr13 25078391 25078601 + 6.36 0.000 Intergenic AluSx3|SINE|Alu -17642 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr14-3255 chr14 77477599 77477809 + 6.36 0.000 intron (NM_199296, intron 6 of 6) L2b|LINE|L2 19611 NM_012111 10598 Hs.204041 NM_012111 ENSG00000100591 AHSA1 AHA1|C14orf3|hAha1|p38 activator of HSP90 ATPase activity 1 protein-coding chr6-3743 chr6 7909482 7909692 + 6.36 0.000 intron (NR_037616, intron 4 of 12) intron (NR_037616, intron 4 of 12) 490 NM_001145549 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr6-4217 chr6 4379730 4379940 + 6.36 0.000 Intergenic Intergenic -108963 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr8-7157 chr8 122758487 122758697 + 6.36 0.000 Intergenic MIR|SINE|MIR -23063 NM_014943 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr19-3871 chr19 29184793 29185003 + 6.36 0.000 Intergenic AluSq2|SINE|Alu 28253 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr15-3468 chr15 94544290 94544500 + 6.36 0.000 Intergenic Intergenic 188465 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr4-4837 chr4 109346959 109347169 + 6.36 0.000 Intergenic Intergenic 44029 NR_160939 645078 Hs.518784 NM_001039778 ZCCHC23 - zinc finger CCHC-type containing 23 ncRNA chr5-6290 chr5 115715808 115716018 + 6.36 0.000 Intergenic Intergenic -43261 NR_104674 102467217 Hs.147738 NR_104674 LOC102467217 - uncharacterized LOC102467217 ncRNA chr1-15230 chr1 111926314 111926524 + 6.36 0.000 intron (NM_172198, intron 2 of 6) MIRb|SINE|MIR 16762 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr4-4664 chr4 83619233 83619443 + 6.36 0.000 Intergenic Intergenic 83230 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr7-7982 chr7 15104875 15105085 + 6.36 0.000 Intergenic Intergenic -130122 NM_001350717 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr5-7455 chr5 32158429 32158639 + 6.36 0.000 intron (NM_022130, intron 1 of 3) intron (NM_022130, intron 1 of 3) 15785 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr17-7795 chr17 39822127 39822337 + 6.36 0.000 intron (NM_001257409, intron 2 of 5) MER21-int|LTR|ERVL 41956 NM_001284514 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr3-10502 chr3 136397472 136397682 + 6.36 0.000 intron (NM_005862, intron 22 of 33) L1MEd|LINE|L1 147237 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr9-6378 chr9 26659778 26659988 + 6.36 0.000 Intergenic Intergenic 232919 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr10-2886 chr10 103855478 103855688 + 6.36 0.000 promoter-TSS (NM_014631) promoter-TSS (NM_014631) -177 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr7-8497 chr7 51686290 51686500 + 6.36 0.000 Intergenic Intergenic -293139 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr3-9950 chr3 94175057 94175267 + 6.36 0.000 Intergenic A-rich|Low_complexity|Low_complexity 112101 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr2-7454 chr2 13098626 13098836 + 6.36 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -91718 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr4-7895 chr4 105679597 105679807 + 6.36 0.000 3' UTR (NM_001242729, exon 14 of 14) 3' UTR (NM_001242729, exon 14 of 14) 28987 NM_020395 57117 Hs.480454 NM_020395 ENSG00000138785 INTS12 INT12|PHF22|SBBI22 integrator complex subunit 12 protein-coding chr10-8480 chr10 89042660 89042870 + 6.36 0.000 Intergenic L1MA3|LINE|L1 -20571 NR_039826 100616128 NR_039826 ENSG00000283664 MIR4679-1 - microRNA 4679-1 ncRNA chr8-3743 chr8 22485603 22485813 + 6.36 0.000 intron (NM_005605, intron 3 of 13) MER65C|LTR|ERV1 44738 NM_001243975 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr6-7188 chr6 38646414 38646624 + 6.36 0.000 Intergenic Intergenic -6590 NM_001099272 114781 Hs.603858 NM_052893 ENSG00000183826 BTBD9 dJ322I12.1 BTB domain containing 9 protein-coding chr13-3408 chr13 96671254 96671464 + 6.36 0.000 intron (NM_153456, intron 1 of 1) LTR104_Mam|LTR|Gypsy 244130 NR_039723 100616137 NR_039723 ENSG00000283487 MIR4501 - microRNA 4501 ncRNA chr14-3563 chr14 105226814 105227024 + 6.36 0.000 intron (NM_001242788, intron 6 of 16) AluJo|SINE|Alu 20966 NM_145685 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chrX-2600 chrX 106354598 106354808 + 6.36 0.000 Intergenic MSTB|LTR|ERVL-MaLR 186398 NM_152423 139221 Hs.592221 NM_152423 ENSG00000157502 PWWP3B MUM1L1 PWWP domain containing 3B protein-coding chr4-4089 chr4 4682308 4682518 + 6.36 0.000 intron (NR_037888, intron 4 of 5) MLT1B|LTR|ERVL-MaLR 18087 NR_145783 109623454 NR_145783 SNORD162 - small nucleolar RNA, C/D box 162 snoRNA chr3-11125 chr3 186870903 186871113 + 6.36 0.000 Intergenic Intergenic -9640 NR_046662 100874095 Hs.638968 NR_046662 ENSG00000226482 ADIPOQ-AS1 - ADIPOQ antisense RNA 1 ncRNA chr16-7127 chr16 89995166 89995376 + 6.36 0.000 non-coding (NR_003226, exon 11 of 11) non-coding (NR_003226, exon 11 of 11) 14850 NM_024043 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr3-10596 chr3 143455221 143455431 + 6.36 0.000 intron (NM_173653, intron 12 of 15) L1MD2|LINE|L1 113080 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr6-4449 chr6 34723469 34723679 + 6.36 0.000 Intergenic MIR3|SINE|MIR 26629 NR_134626 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr6-2764 chr6 129124830 129125040 + 6.36 0.000 intron (NM_000426, intron 4 of 64) L2|LINE|L2 241794 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr3-5565 chr3 4868495 4868705 + 6.36 0.000 Intergenic CpG 37901 NR_125914 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr14-2287 chr14 55454615 55454825 + 6.36 0.000 Intergenic Intergenic -14175 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr2-7693 chr2 31033775 31033985 + 6.36 0.000 intron (NM_024572, intron 1 of 14) L2|LINE|L2 95760 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr9-5334 chr9 88389154 88389364 + 6.36 0.000 intron (NM_006717, intron 1 of 5) CpG 815 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr14-3384 chr14 94515703 94515913 + 6.36 0.000 intron (NM_173850, intron 2 of 5) MIRb|SINE|MIR 2036 NM_173850 145264 Hs.99476 NM_173850 ENSG00000165953 SERPINA12 OL-64 serpin family A member 12 protein-coding chr2-14137 chr2 202747328 202747538 + 6.36 0.000 intron (NM_173511, intron 4 of 7) L1M2|LINE|L1 81801 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr2-10960 chr2 85673204 85673414 + 6.36 0.000 Intergenic Intergenic -4568 NM_198843 6439 Hs.512690 NM_000542 ENSG00000168878 SFTPB PSP-B|SFTB3|SFTP3|SMDP1|SP-B surfactant protein B protein-coding chr3-11218 chr3 194747016 194747226 + 6.36 0.000 intron (NR_037891, intron 3 of 3) intron (NR_037891, intron 3 of 3) 21588 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr17-5161 chr17 9241314 9241524 + 6.36 0.000 3' UTR (NM_004822, exon 7 of 7) 3' UTR (NM_004822, exon 7 of 7) -62301 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr11-6969 chr11 114838785 114838995 + 6.36 0.000 Intergenic L2b|LINE|L2 160363 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr22-1778 chr22 29224195 29224405 + 6.36 0.000 intron (NM_001267895, intron 3 of 14) intron (NM_001267895, intron 3 of 14) 18404 NM_133455 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr1-9697 chr1 51890988 51891198 + 6.36 0.000 Intergenic Intergenic -12156 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr7-6754 chr7 8853111 8853321 + 6.36 0.000 Intergenic L2a|LINE|L2 419607 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr19-6630 chr19 31436013 31436223 + 6.36 0.000 Intergenic Intergenic -86682 NR_138034 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr1-16246 chr1 210951851 210952061 + 6.36 0.000 intron (NM_002238, intron 6 of 10) L2c|LINE|L2 181418 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA chr9-8255 chr9 111431779 111431989 + 6.36 0.000 intron (NM_001363756, intron 7 of 48) intron (NM_001363756, intron 7 of 48) 51678 NM_001364931 23392 Hs.368255 NM_001080398 ENSG00000136813 ECPAS ECM29|KIAA0368 Ecm29 proteasome adaptor and scaffold protein-coding chr4-7519 chr4 75157882 75158092 + 6.36 0.000 Intergenic Intergenic -73279 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA chr2-13866 chr2 178495494 178495704 + 6.36 0.000 exon (NM_019091, exon 5 of 8) exon (NM_019091, exon 5 of 8) 15142 NM_019091 65977 Hs.41086 NM_019091 ENSG00000116095 PLEKHA3 FAPP1 pleckstrin homology domain containing A3 protein-coding chr11-7446 chr11 120820000 120820210 + 6.36 0.000 promoter-TSS (NR_133008) promoter-TSS (NR_133008) -990 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr4-8704 chr4 182415108 182415318 + 6.36 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 171811 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr13-4258 chr13 97392061 97392271 + 6.36 0.000 3' UTR (NM_001306070, exon 8 of 8) 3' UTR (NM_001306070, exon 8 of 8) -42003 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr7-4206 chr7 138192573 138192783 + 6.36 0.000 Intergenic AluSg|SINE|Alu 68920 NR_039678 100616226 NR_039678 ENSG00000284028 MIR4468 - microRNA 4468 ncRNA chr3-4916 chr3 193115939 193116149 + 6.36 0.000 Intergenic MSTD|LTR|ERVL-MaLR -125178 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr11-7565 chr11 26228313 26228523 + 6.36 0.000 intron (NM_001313726, intron 1 of 27) intron (NM_001313726, intron 1 of 27) 39295 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr3-8795 chr3 5434556 5434766 + 6.36 0.000 Intergenic Intergenic -184406 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr1-14277 chr1 37359286 37359496 + 6.36 0.000 Intergenic Intergenic 115052 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr3-6967 chr3 164772688 164772898 + 6.36 0.000 intron (NR_126405, intron 1 of 3) L1MA6|LINE|L1 58687 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr4-2860 chr4 69852352 69852562 + 6.36 0.000 intron (NM_005420, intron 4 of 7) intron (NM_005420, intron 4 of 7) 7688 NM_005420 6783 Hs.479898 NM_005420 ENSG00000109193 SULT1E1 EST|EST-1|ST1E1|STE sulfotransferase family 1E member 1 protein-coding chr8-2843 chr8 130635610 130635820 + 6.36 0.000 Intergenic Intergenic -192041 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr1-9294 chr1 26166522 26166732 + 6.36 0.000 intron (NM_001364669, intron 1 of 3) intron (NM_001364669, intron 1 of 3) 1955 NM_001364669 110806296 NM_001364667 ENSG00000282872 C1orf232 - chromosome 1 open reading frame 230 protein-coding chr16-3048 chr16 55197718 55197928 + 6.36 0.000 Intergenic MIR|SINE|MIR -126736 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chrX-4751 chrX 94441348 94441558 + 6.36 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 621773 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr3-8225 chr3 47955150 47955360 + 6.36 0.000 intron (NM_002375, intron 3 of 18) ERVL-E-int|LTR|ERVL 105700 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr6-6662 chr6 160565343 160565553 + 6.36 0.000 intron (NM_005577, intron 28 of 38) L1PA5|LINE|L1 -54324 NR_028092 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr6-7715 chr6 88986311 88986521 + 6.36 0.000 Intergenic Intergenic -22798 NM_001286426 8732 Hs.567378 NM_003800 ENSG00000111880 RNGTT CAP1A|HCE|HCE1|hCAP RNA guanylyltransferase and 5'-phosphatase protein-coding chr1-7165 chr1 207496444 207496654 + 6.36 0.000 intron (NM_000573, intron 1 of 38) CpG 392 NM_000573 1378 Hs.334019 NM_000573 ENSG00000203710 CR1 C3BR|C4BR|CD35|KN complement C3b/C4b receptor 1 (Knops blood group) protein-coding chr9-8057 chr9 97398326 97398536 + 6.36 0.000 Intergenic L2c|LINE|L2 -1740 NR_026847 286359 Hs.132262 NM_182600 LOC286359 - uncharacterized LOC286359 ncRNA chr17-7755 chr17 34789778 34789988 + 6.36 0.000 Intergenic Intergenic 171577 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr7-2784 chr7 74496344 74496554 + 6.36 0.000 intron (NM_016328, intron 1 of 26) (TGTA)n|Simple_repeat|Simple_repeat 42543 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr1-15190 chr1 109713915 109714125 + 6.36 0.000 intron (NM_000851, intron 5 of 7) intron (NM_000851, intron 5 of 7) 1769 NM_000851 2949 Hs.75652 NM_000851 ENSG00000134201 GSTM5 GSTM5-5|GTM5 glutathione S-transferase mu 5 protein-coding chr13-4432 chr13 111130817 111131027 + 6.36 0.000 intron (NM_001113512, intron 1 of 17) intron (NM_001113512, intron 1 of 17) -15244 NR_046667 100874238 Hs.569218 NR_046667 ENSG00000235875 ARHGEF7-AS2 - ARHGEF7 antisense RNA 2 ncRNA chr1-16632 chr1 239770018 239770228 + 6.36 0.000 intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) -51004 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr20-3562 chr20 3090093 3090303 + 6.36 0.000 Intergenic L2a|LINE|L2 -5474 NM_000490 551 Hs.89648 NM_000490 ENSG00000101200 AVP ADH|ARVP|AVP-NPII|AVRP|VP arginine vasopressin protein-coding chr10-8704 chr10 101839871 101840081 + 6.36 0.000 promoter-TSS (NM_173194) promoter-TSS (NM_173194) -105 NM_173194 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr1-6208 chr1 209103675 209103885 + 6.36 0.000 Intergenic Intergenic 131326 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr16-3369 chr16 55036329 55036539 + 6.36 0.000 Intergenic Intergenic 105235 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr2-8939 chr2 186508752 186508962 + 6.36 0.000 3' UTR (NM_018471, exon 10 of 10) 3' UTR (NM_018471, exon 10 of 10) 22597 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding chr20-1582 chr20 3711081 3711291 + 6.36 0.000 intron (NM_023068, intron 1 of 21) intron (NM_023068, intron 1 of 21) 1414 NM_023068 6614 Hs.31869 NM_023068 ENSG00000088827 SIGLEC1 CD169|SIGLEC-1|SN sialic acid binding Ig like lectin 1 protein-coding chr6-6848 chr6 8549296 8549506 + 6.36 0.000 intron (NR_038980, intron 2 of 4) intron (NR_038980, intron 2 of 4) -102808 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr7-5491 chr7 43123714 43123924 + 6.36 0.000 intron (NR_135295, intron 3 of 6) intron (NR_135295, intron 3 of 6) 5923 NR_135295 100127950 Hs.666610 NR_135295 ENSG00000181211 HECW1-IT1 - HECW1 intronic transcript 1 ncRNA chr2-13353 chr2 135722020 135722230 + 6.36 0.000 intron (NM_001282798, intron 24 of 25) intron (NM_001282798, intron 24 of 25) -19730 NM_014607 23190 Hs.591242 NM_014607 ENSG00000144224 UBXN4 UBXD2|UBXDC1|erasin UBX domain protein 4 protein-coding chr9-5164 chr9 62815273 62815483 + 6.36 0.000 Intergenic L1M1|LINE|L1 13913 NR_121647 103352539 Hs.351215 NR_121647 ENSG00000238113 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA chr6-2717 chr6 52503263 52503473 + 6.36 0.000 intron (NM_012288, intron 10 of 10) intron (NM_012288, intron 10 of 10) 73692 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr8-7216 chr8 126662153 126662363 + 6.36 0.000 Intergenic AluJr|SINE|Alu -103780 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr7-8661 chr7 71603980 71604190 + 6.36 0.000 intron (NM_022479, intron 6 of 10) intron (NM_022479, intron 6 of 10) -296315 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr12-5555 chr12 3550893 3551103 + 6.36 0.000 intron (NM_019854, intron 3 of 9) intron (NM_019854, intron 3 of 9) -58179 NR_126055 100129223 Hs.586788 NR_126055 THCAT155 - thyroid cancer-associated transcript 155 ncRNA chr6-7846 chr6 104948239 104948449 + 6.36 0.000 Intergenic AluSq2|SINE|Alu -7817 NR_046407 100113403 Hs.649249 NR_046407 ENSG00000203809 LIN28B-AS1 C6orf220|LINC00577|dJ439I14.1 LIN28B antisense RNA 1 ncRNA chr6-3406 chr6 83570929 83571139 + 6.36 0.000 intron (NM_001242792, intron 25 of 28) THE1B-int|LTR|ERVL-MaLR 58500 NM_001170423 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr17-5029 chr17 1567949 1568159 + 6.36 0.000 Intergenic AluSq2|SINE|Alu -5262 NM_006224 5306 Hs.429819 NM_006224 ENSG00000174238 PITPNA HEL-S-36|PI-TPalpha|PITPN|VIB1A phosphatidylinositol transfer protein alpha protein-coding chr2-7480 chr2 16840764 16840974 + 6.36 0.000 Intergenic Intergenic -175035 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chrX-4530 chrX 67696115 67696325 + 6.36 0.000 TTS (NM_001348061) TTS (NM_001348061) 151597 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr10-3076 chr10 5736251 5736461 + 6.36 0.000 intron (NM_017782, intron 12 of 20) AluSz|SINE|Alu 51518 NR_135800 54906 Hs.610717 NM_017782 ENSG00000108021 TASOR2 C10orf18|FAM208B|bA318E3.2 transcription activation suppressor family member 2 protein-coding chrX-5327 chrX 146093710 146093920 + 6.36 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -65943 NR_030581 100126341 NR_030581 ENSG00000216056 MIR891A MIRN891A microRNA 891a ncRNA chr12-7854 chr12 104317277 104317487 + 6.36 0.000 intron (NM_001093771, intron 7 of 16) (T)n|Simple_repeat|Simple_repeat 13643 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr8-6944 chr8 104464059 104464269 + 6.36 0.000 intron (NM_001385, intron 1 of 9) intron (NM_001385, intron 1 of 9) 2891 NM_001385 1807 Hs.443161 NM_001385 ENSG00000147647 DPYS DHP|DHPase dihydropyrimidinase protein-coding chr13-3391 chr13 90299210 90299420 + 6.36 0.000 Intergenic Intergenic 68133 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr11-8529 chr11 126858582 126858792 + 6.36 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -82059 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr9-7229 chr9 1603739 1603949 + 6.36 0.000 Intergenic Intergenic -411503 NM_001289397 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr2-8977 chr2 190604463 190604673 + 6.36 0.000 Intergenic MIRb|SINE|MIR -44327 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr9-6137 chr9 33851604 33851814 + 6.36 0.000 intron (NM_017811, intron 1 of 4) L1MC4|LINE|L1 34549 NM_017811 54926 Hs.643648 NM_017811 ENSG00000107341 UBE2R2 CDC34B|E2-CDC34B|UBC3B ubiquitin conjugating enzyme E2 R2 protein-coding chr3-6724 chr3 136241832 136242042 + 6.36 0.000 Intergenic Intergenic -8388 NM_001178014 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chrX-5142 chrX 130607658 130607868 + 6.36 0.000 Intergenic Intergenic 112822 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr6-4709 chr6 56833940 56834150 + 6.36 0.000 intron (NM_001144770, intron 2 of 94) AluJo|SINE|Alu 9620 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr9-7748 chr9 75601343 75601553 + 6.36 0.000 Intergenic Intergenic -289196 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr7-4198 chr7 133139468 133139678 + 6.36 0.000 Intergenic LTR16E1|LTR|ERVL -31062 NR_133931 105375512 Hs.521205 NR_133931 LOC105375512 - uncharacterized LOC105375512 ncRNA chr18-2312 chr18 79967959 79968169 + 6.36 0.000 intron (NM_001136180, intron 2 of 3) intron (NM_001136180, intron 2 of 3) 3421 NM_001136180 440498 Hs.191582 NM_001136180 ENSG00000226742 HSBP1L1 - heat shock factor binding protein 1 like 1 protein-coding chr21-819 chr21 37289119 37289329 + 6.36 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -21116 NM_001331021 10311 Hs.369488 NM_006052 ENSG00000157538 VPS26C DCRA|DSCR3|DSCRA VPS26 endosomal protein sorting factor C protein-coding chr7-1565 chr7 69489128 69489338 + 6.36 0.000 Intergenic L4_C_Mam|LINE|RTE-X 108391 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr5-8308 chr5 115986393 115986603 + 6.36 0.000 intron (NM_173800, intron 3 of 19) Tigger12c|DNA|TcMar-Tigger 24023 NM_173800 206338 Hs.98288 NM_173800 ENSG00000172901 LVRN APQ|AQPEP|TAQPEP laeverin protein-coding chr10-6433 chr10 21518803 21519013 + 6.36 0.000 5' UTR (NM_207371, exon 4 of 4) 5' UTR (NM_207371, exon 4 of 4) 6774 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr11-7787 chr11 93986690 93986900 + 6.36 0.000 Intergenic Intergenic -34559 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chr12-7741 chr12 93609870 93610080 + 6.36 0.000 Intergenic MSTD|LTR|ERVL-MaLR 37300 NM_001270471 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr2-13876 chr2 179403775 179403985 + 6.36 0.000 Intergenic Intergenic -139048 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr19-3557 chr19 45939902 45940112 + 6.36 0.000 exon (NM_002516, exon 4 of 4) exon (NM_002516, exon 4 of 4) -25229 NM_001029861 339345 Hs.434218 NM_001029861 ENSG00000188425 NANOS2 NOS2|ZC2HC12B nanos C2HC-type zinc finger 2 protein-coding chr6-2886 chr6 10099282 10099492 + 6.36 0.000 Intergenic Intergenic -305115 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr13-2971 chr13 72141902 72142112 + 6.36 0.000 Intergenic Intergenic -274803 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr1-11909 chr1 54432687 54432897 + 6.36 0.000 Intergenic AluSg|SINE|Alu -26398 NM_018070 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr9-6135 chr9 32888287 32888497 + 6.36 0.000 Intergenic Intergenic 104852 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr1-10529 chr1 169623983 169624193 + 6.36 0.000 intron (NM_003005, intron 1 of 16) intron (NM_003005, intron 1 of 16) 6036 NM_003005 6403 Hs.73800 NM_003005 ENSG00000174175 SELP CD62|CD62P|GMP140|GRMP|LECAM3|PADGEM|PSEL selectin P protein-coding chr4-8646 chr4 176237398 176237608 + 6.36 0.000 intron (NM_080874, intron 1 of 6) intron (NM_080874, intron 1 of 6) 31719 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chrX-2466 chrX 83215904 83216114 + 6.36 0.000 Intergenic L1MB1|LINE|L1 -292281 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr1-9681 chr1 50588786 50588996 + 6.36 0.000 intron (NM_007051, intron 9 of 18) intron (NM_007051, intron 9 of 18) -165448 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr10-8396 chr10 83109380 83109590 + 6.36 0.000 Intergenic L1PA13|LINE|L1 567604 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr10-7796 chr10 36874555 36874765 + 6.36 0.000 Intergenic AluY|SINE|Alu -251197 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr12-6488 chr12 103824931 103825141 + 6.36 0.000 intron (NM_001031701, intron 1 of 13) intron (NM_001031701, intron 1 of 13) 16198 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr6-6738 chr6 2500720 2500930 + 6.36 0.000 Intergenic Intergenic -133675 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr9-6151 chr9 38277786 38277996 + 6.36 0.000 Intergenic Intergenic -114811 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr12-8376 chr12 132664299 132664509 + 6.36 0.000 exon (NM_006231, exon 22 of 49) exon (NM_006231, exon 22 of 49) 23120 NM_006231 5426 Hs.524871 NM_006231 ENSG00000177084 POLE CRCS12|FILS|IMAGEI|POLE1 DNA polymerase epsilon, catalytic subunit protein-coding chr13-1908 chr13 50780395 50780605 + 6.36 0.000 intron (NM_198989, intron 1 of 1) intron (NM_198989, intron 1 of 1) -27355 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr22-1227 chr22 42404300 42404510 + 6.36 0.000 intron (NM_001318323, intron 2 of 4) intron (NM_001318323, intron 2 of 4) 27954 NM_001318323 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr8-3225 chr8 135768586 135768796 + 6.36 0.000 Intergenic HERVH-int|LTR|ERV1 311235 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr3-8070 chr3 9871048 9871258 + 6.36 0.000 intron (NM_001199551, intron 3 of 6) L1MB7|LINE|L1 7659 NM_001199623 63924 Hs.567562 NM_022094 ENSG00000187288 CIDEC CIDE-3|CIDE3|FPLD5|FSP27 cell death inducing DFFA like effector c protein-coding chr7-6682 chr7 154239691 154239901 + 6.36 0.000 intron (NM_130797, intron 1 of 25) AluSz|SINE|Alu -65363 NM_001290252 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr3-6703 chr3 133412809 133413019 + 6.36 0.000 intron (NM_003571, intron 1 of 6) intron (NM_003571, intron 1 of 6) 12858 NM_003571 8419 Hs.659862 NM_003571 ENSG00000170819 BFSP2 CP47|CP49|CTRCT12|LIFL-L|PHAKOSIN beaded filament structural protein 2 protein-coding chr7-8184 chr7 31008720 31008930 + 6.36 0.000 Intergenic HAL1|LINE|L1 -43483 NM_001199636 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr7-8101 chr7 25903251 25903461 + 6.36 0.000 Intergenic Intergenic 46630 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr9-6296 chr9 135585719 135585929 + 6.36 0.000 non-coding (NR_034016, exon 6 of 6) non-coding (NR_034016, exon 6 of 6) 10899 NR_034017 100130954 Hs.550769 NR_034016 ENSG00000237339 LINC01502 - long intergenic non-protein coding RNA 1502 ncRNA chr17-5327 chr17 28475237 28475447 + 6.36 0.000 intron (NM_001145975, intron 1 of 11) intron (NM_001145975, intron 1 of 11) 1698 NM_001346684 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr11-3093 chr11 27898881 27899091 + 6.36 0.000 Intergenic Intergenic -157829 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr6-8285 chr6 142662496 142662706 + 6.36 0.000 Intergenic MSTA|LTR|ERVL-MaLR -24712 NR_027312 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr10-7028 chr10 78967605 78967815 + 6.36 0.000 intron (NR_015429, intron 3 of 7) MIRb|SINE|MIR 99738 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr9-6153 chr9 42437300 42437510 + 6.36 0.000 Intergenic L1P3|LINE|L1 131944 NR_126050 103908605 Hs.721139 NR_126050 LOC103908605 - uncharacterized LOC103908605 ncRNA chr5-7445 chr5 31542116 31542326 + 6.36 0.000 intron (NR_134298, intron 6 of 8) AluY|SINE|Alu 9920 NM_018356 55322 Hs.519246 NM_018356 ENSG00000082213 C5orf22 - chromosome 5 open reading frame 22 protein-coding chr1-7484 chr1 101464350 101464560 + 6.36 0.000 Intergenic Intergenic 140618 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr1-16349 chr1 219177313 219177523 + 6.36 0.000 intron (NM_001300772, intron 1 of 4) MER58C|DNA|hAT-Charlie 2449 NM_001300772 127018 Hs.657617 NM_138794 ENSG00000143353 LYPLAL1 Q96AV0 lysophospholipase like 1 protein-coding chr15-3901 chr15 24956615 24956825 + 6.36 0.000 intron (NM_001349464, intron 1 of 9) intron (NM_001349464, intron 1 of 9) 1728 NM_001349464 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr13-1785 chr13 19920708 19920918 + 6.36 0.000 Intergenic AluSc|SINE|Alu -36593 NM_001353159 7750 Hs.507433 NM_003453 ENSG00000121741 ZMYM2 FIM|MYM|RAMP|SCLL|ZNF198 zinc finger MYM-type containing 2 protein-coding chr12-7708 chr12 90979945 90980155 + 6.36 0.000 intron (NM_004950, intron 2 of 6) intron (NM_004950, intron 2 of 6) -24874 NR_130711 196477 Hs.128574 NM_152638 ENSG00000197651 CCER1 C12orf12 coiled-coil glutamate rich protein 1 protein-coding chr10-7882 chr10 49103925 49104135 + 6.36 0.000 intron (NM_144984, intron 2 of 2) AluSx|SINE|Alu 11492 NM_001031746 196740 Hs.522928 NM_144984 ENSG00000165633 VSTM4 C10orf72 V-set and transmembrane domain containing 4 protein-coding chr15-4040 chr15 63312384 63312594 + 6.36 0.000 Intergenic L1MCb|LINE|L1 34884 NM_031301 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chr1-15315 chr1 118718918 118719128 + 6.36 0.000 Intergenic Tigger4a|DNA|TcMar-Tigger 269320 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr1-9089 chr1 16175729 16175939 + 6.36 0.000 Intergenic Intergenic -19765 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr9-4964 chr9 17745519 17745729 + 6.36 0.000 intron (NM_003026, intron 1 of 8) intron (NM_003026, intron 1 of 8) 166558 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr13-4215 chr13 93797752 93797962 + 6.36 0.000 intron (NM_005708, intron 2 of 8) L2|LINE|L2 60616 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr5-6299 chr5 119544618 119544828 + 6.36 0.000 Intergenic Intergenic -84835 NM_001367956 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr3-6155 chr3 57540009 57540219 + 6.36 0.000 intron (NM_198564, intron 2 of 11) AluSx1|SINE|Alu 4230 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr1-14117 chr1 31274943 31275153 + 6.36 0.000 intron (NM_004814, intron 5 of 9) intron (NM_004814, intron 5 of 9) 21740 NM_004814 9410 Hs.33962 NM_004814 ENSG00000060688 SNRNP40 40K|HPRP8BP|PRP8BP|PRPF8BP|SPF38|WDR57 small nuclear ribonucleoprotein U5 subunit 40 protein-coding chr6-6355 chr6 58059765 58059975 + 6.36 0.000 Intergenic Intergenic -98424 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr6-5179 chr6 129264541 129264751 + 6.36 0.000 intron (NM_000426, intron 15 of 64) L2a|LINE|L2 381505 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr2-7008 chr2 146471128 146471338 + 6.36 0.000 Intergenic Intergenic -115824 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr6-6260 chr6 34520281 34520491 + 6.36 0.000 intron (NM_001199583, intron 1 of 9) intron (NM_001199583, intron 1 of 9) 5514 NM_001199583 29993 Hs.520087 NM_020804 ENSG00000124507 PACSIN1 SDPI protein kinase C and casein kinase substrate in neurons 1 protein-coding chr12-7000 chr12 31364511 31364721 + 6.36 0.000 intron (NR_146469, intron 1 of 1) intron (NR_146469, intron 1 of 1) 4685 NR_146469 101929027 Hs.266041 NR_146469 ENSG00000256232 LINC02387 - long intergenic non-protein coding RNA 2387 ncRNA chr7-7877 chr7 5794024 5794234 + 6.36 0.000 Intergenic LTR12C|LTR|ERV1 -12466 NM_207116 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr3-10656 chr3 149480447 149480657 + 6.36 0.000 intron (NM_004617, intron 2 of 4) intron (NM_004617, intron 2 of 4) 5855 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr2-13148 chr2 118817077 118817287 + 6.36 0.000 Intergenic Intergenic 31001 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr2-10817 chr2 50956904 50957114 + 6.36 0.000 intron (NM_004801, intron 2 of 21) intron (NM_004801, intron 2 of 21) 75123 NM_001330078 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr14-2109 chr14 74383024 74383234 + 6.36 0.000 Intergenic AluSq2|SINE|Alu 34658 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr16-2339 chr16 34064087 34064297 + 6.36 0.000 Intergenic Intergenic -99386 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr2-10125 chr2 64730705 64730915 + 6.36 0.000 Intergenic Intergenic -76897 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr6-7326 chr6 45657882 45658092 + 6.36 0.000 Intergenic L2|LINE|L2 235712 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr4-7726 chr4 90109320 90109530 + 6.36 0.000 Intergenic L2a|LINE|L2 -18108 NM_001145065 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr8-4003 chr8 56122634 56122844 + 6.36 0.000 Intergenic Intergenic -8757 NM_005372 4342 Hs.533432 NM_005372 ENSG00000172680 MOS MSV MOS proto-oncogene, serine/threonine kinase protein-coding chr5-7044 chr5 168434090 168434300 + 6.36 0.000 intron (NM_001161661, intron 15 of 22) intron (NM_001161661, intron 15 of 22) -52276 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chr12-3622 chr12 79948928 79949138 + 6.36 0.000 Intergenic Intergenic -13578 NM_001244990 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr7-9126 chr7 108107154 108107364 + 6.36 0.000 intron (NM_001318048, intron 6 of 17) intron (NM_001318048, intron 6 of 17) 23102 NM_001318047 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr4-6733 chr4 4524358 4524568 + 6.36 0.000 intron (NM_001346282, intron 1 of 10) MLT1K|LTR|ERVL-MaLR 17585 NM_016930 53407 Hs.584913 NM_016930 ENSG00000168818 STX18 Ufe1 syntaxin 18 protein-coding chr2-10506 chr2 228128404 228128614 + 6.36 0.000 intron (NM_030623, intron 2 of 10) Tigger1|DNA|TcMar-Tigger 53136 NM_030623 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr3-9665 chr3 62225295 62225505 + 6.36 0.000 intron (NM_002841, intron 13 of 29) intron (NM_002841, intron 13 of 29) 93547 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr4-2899 chr4 81795475 81795685 + 6.36 0.000 Intergenic Intergenic -323673 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr14-4606 chr14 52126118 52126328 + 6.36 0.000 Intergenic Intergenic -57164 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr2-11150 chr2 143629419 143629629 + 6.36 0.000 intron (NM_018460, intron 12 of 13) intron (NM_018460, intron 12 of 13) -307543 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr4-5971 chr4 175371454 175371664 + 6.36 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 416117 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr6-7512 chr6 64832946 64833156 + 6.36 0.000 intron (NM_001292009, intron 19 of 43) intron (NM_001292009, intron 19 of 43) -468367 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr2-8961 chr2 189500512 189500722 + 6.36 0.000 Intergenic MamSINE1|SINE|tRNA-RTE 59143 NM_032168 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr4-6297 chr4 83996470 83996680 + 6.36 0.000 intron (NR_125909, intron 8 of 8) intron (NR_125909, intron 8 of 8) 302594 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr8-7371 chr8 138050139 138050349 + 6.36 0.000 intron (NR_161374, intron 1 of 7) L2b|LINE|L2 33301 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA chrX-3907 chrX 8896489 8896699 + 6.36 0.000 Intergenic Intergenic -95211 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr12-6898 chr12 22955788 22955998 + 6.36 0.000 Intergenic Intergenic -219743 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr4-7995 chr4 115239182 115239392 + 6.36 0.000 Intergenic Intergenic -125667 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding chr12-4220 chr12 104863764 104863974 + 6.36 0.000 intron (NM_032148, intron 8 of 11) HAL1|LINE|L1 94421 NM_001352172 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr1-7121 chr1 202174599 202174809 + 6.36 0.000 intron (NR_002930, intron 6 of 21) intron (NR_002930, intron 6 of 21) 6653 NR_002930 148713 Hs.523870 NR_002930 ENSG00000243323 PTPRVP ESP|OST-PTP|PTPRV protein tyrosine phosphatase receptor type V, pseudogene pseudo chr14-5165 chr14 91406064 91406274 + 6.36 0.000 intron (NM_001080414, intron 3 of 29) intron (NM_001080414, intron 3 of 29) 11651 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr13-1789 chr13 23159976 23160186 + 6.36 0.000 Intergenic CpG -20840 NM_000231 6445 Hs.37167 NM_000231 ENSG00000102683 SGCG 35DAG|A4|DAGA4|DMDA|DMDA1|LGMD2C|LGMDR5|MAM|SCARMD2|SCG3|gamma-SG sarcoglycan gamma protein-coding chr16-4626 chr16 71924064 71924274 + 6.36 0.000 intron (NM_014761, intron 8 of 9) intron (NM_014761, intron 8 of 9) 28638 NM_014761 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr2-6804 chr2 53751825 53752035 + 6.36 0.000 intron (NM_145863, intron 1 of 8) intron (NM_145863, intron 1 of 8) -15853 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr4-6163 chr4 39196161 39196371 + 6.36 0.000 intron (NM_025132, intron 5 of 36) L2|LINE|L2 13737 NM_001317924 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr3-7759 chr3 65085200 65085410 + 6.36 0.000 Intergenic L1MC1|LINE|L1 -397305 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr8-5939 chr8 19314407 19314617 + 6.36 0.000 intron (NM_001363111, intron 1 of 8) CpG 536 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr10-6851 chr10 26142438 26142648 + 6.36 0.000 intron (NM_017433, intron 20 of 34) intron (NM_017433, intron 20 of 34) -73764 NM_000818 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr5-7290 chr5 14316114 14316324 + 6.36 0.000 intron (NM_007118, intron 8 of 56) intron (NM_007118, intron 8 of 56) -147764 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr5-7086 chr5 176659363 176659573 + 6.36 0.000 TTS (NM_001366492) TTS (NM_001366492) 11984 NM_001366492 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr10-7476 chr10 10361816 10362026 + 6.36 0.000 Intergenic Intergenic 100428 NR_120637 101928322 Hs.576789 NR_120637 ENSG00000270111 CELF2-DT - CELF2 divergent transript ncRNA chr20-1992 chr20 48821310 48821520 + 6.36 0.000 intron (NM_020820, intron 1 of 39) intron (NM_020820, intron 1 of 39) 6584 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr12-4832 chr12 57309275 57309485 + 6.36 0.000 intron (NM_001351211, intron 3 of 24) intron (NM_001351211, intron 3 of 24) 32394 NM_001351208 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr11-9780 chr11 69706780 69706990 + 6.36 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -2863 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr10-4852 chr10 14449928 14450138 + 6.36 0.000 Intergenic Intergenic 13457 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA chr2-8945 chr2 187078373 187078583 + 6.36 0.000 Intergenic LTR78|LTR|ERV1 -229308 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr13-4077 chr13 76922011 76922221 + 6.36 0.000 Intergenic L3|LINE|CR1 -6335 NR_026983 690 Hs.567241 NR_026983 BTF3P11 BTF3L1|HUMBTFB|OCIF|OPG|TNFRSF11B basic transcription factor 3 pseudogene 11 pseudo chr16-3868 chr16 69705893 69706103 + 6.36 0.000 Intergenic AluJo|SINE|Alu 2677 NR_145753 109617018 NR_145753 SNORD13H - small nucleolar RNA, C/D box 13H snoRNA chr3-5815 chr3 29311210 29311420 + 6.36 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 30003 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr5-4755 chr5 52909330 52909540 + 6.36 0.000 intron (NM_181501, intron 13 of 28) intron (NM_181501, intron 13 of 28) -79917 NR_073105 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr1-14397 chr1 44245014 44245224 + 6.36 0.000 promoter-TSS (NR_110056) promoter-TSS (NR_110056) -836 NR_046817 100874278 Hs.132497 NR_046817 ENSG00000233602 ERI3-IT1 - ERI3 intronic transcript 1 ncRNA chr7-8817 chr7 83903778 83903988 + 6.36 0.000 Intergenic Intergenic -254744 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr5-8864 chr5 153617303 153617513 + 6.36 0.000 intron (NM_001258020, intron 3 of 16) intron (NM_001258020, intron 3 of 16) 125236 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chrX-3209 chrX 50884176 50884386 + 6.36 0.000 Intergenic Intergenic -26454 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chrX-2313 chrX 54994806 54995016 + 6.36 0.000 promoter-TSS (NM_001271804) promoter-TSS (NM_001271804) -723 NM_001271804 5207 Hs.444304 NM_002625 ENSG00000158571 PFKFB1 F6PK|HL2K|PFRX 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 protein-coding chr8-6170 chr8 32526708 32526918 + 6.36 0.000 intron (NM_013962, intron 1 of 4) L2a|LINE|L2 -21397 NM_013958 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr4-2338 chr4 177928340 177928550 + 6.36 0.000 intron (NR_028342, intron 2 of 5) intron (NR_028342, intron 2 of 5) -20509 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr22-2331 chr22 40594679 40594889 + 6.36 0.000 intron (NM_020831, intron 1 of 14) intron (NM_020831, intron 1 of 14) 41935 NM_020831 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr16-5656 chr16 68113397 68113607 + 6.36 0.000 intron (NM_004555, intron 1 of 10) L1PA10|LINE|L1 28132 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr20-4123 chr20 42244809 42245019 + 6.36 0.000 intron (NM_133170, intron 15 of 31) intron (NM_133170, intron 15 of 31) -440569 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr20-3151 chr20 38643651 38643861 + 6.36 0.000 exon (NM_001164431, exon 11 of 15) exon (NM_001164431, exon 11 of 15) 41947 NM_001164431 343578 NM_001164431 ENSG00000124143 ARHGAP40 C20orf95|dJ1100H13.4 Rho GTPase activating protein 40 protein-coding chr5-5131 chr5 103771129 103771339 + 6.36 0.000 Intergenic AluSz|SINE|Alu -208445 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr3-9112 chr3 29610549 29610759 + 6.36 0.000 intron (NM_001003792, intron 4 of 13) intron (NM_001003792, intron 4 of 13) 323502 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr11-4458 chr11 101671850 101672060 + 6.36 0.000 Intergenic Intergenic -87948 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr2-7149 chr2 197229936 197230146 + 6.36 0.000 intron (NM_153697, intron 1 of 9) intron (NM_153697, intron 1 of 9) 32050 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr2-8897 chr2 179165947 179166157 + 6.36 0.000 intron (NM_178123, intron 5 of 17) L1ME1|LINE|L1 98780 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr19-7070 chr19 55313946 55314156 + 6.36 0.000 intron (NR_104071, intron 6 of 6) AluSx|SINE|Alu 11290 NM_001282011 284417 Hs.382625 NM_001085488 ENSG00000180061 TMEM150B DRAM3|TMEM224|TTN2 transmembrane protein 150B protein-coding chr4-7291 chr4 52991753 52991963 + 6.36 0.000 intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 129541 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr9-6929 chr9 95207753 95207963 + 6.36 0.000 intron (NM_001243744, intron 4 of 13) intron (NM_001243744, intron 4 of 13) 109396 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr4-6451 chr4 139717982 139718192 + 6.36 0.000 3' UTR (NM_018717, exon 5 of 5) 3' UTR (NM_018717, exon 5 of 5) 52268 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr8-6698 chr8 83693951 83694161 + 6.36 0.000 Intergenic LTR12C|LTR|ERV1 290298 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr5-3194 chr5 79316784 79316994 + 6.36 0.000 intron (NM_152405, intron 10 of 10) AluSx1|SINE|Alu 80758 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr12-7986 chr12 111289471 111289681 + 6.36 0.000 intron (NM_015267, intron 4 of 21) L2b|LINE|L2 -14566 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chrX-1336 chrX 134265902 134266112 + 6.36 0.000 Intergenic Intergenic 28794 NM_001353453 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr7-9027 chr7 101493863 101494073 + 6.36 0.000 intron (NM_133457, intron 3 of 12) Charlie4a|DNA|hAT-Charlie 75038 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr11-10218 chr11 97814444 97814654 + 6.36 0.000 Intergenic L1MCc|LINE|L1 -1206400 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr1-14757 chr1 67859042 67859252 + 6.36 0.000 intron (NR_040077, intron 1 of 9) MIR|SINE|MIR -25680 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr3-7541 chr3 185091277 185091487 + 6.36 0.000 intron (NM_001025266, intron 1 of 1) intron (NM_001025266, intron 1 of 1) 61678 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr15-5124 chr15 89792172 89792382 + 6.36 0.000 exon (NM_001150, exon 18 of 21) exon (NM_001150, exon 18 of 21) 15945 NM_001039958 145873 Hs.37311 NM_001039958 ENSG00000188095 MESP2 SCDO2|bHLHc6 mesoderm posterior bHLH transcription factor 2 protein-coding chr1-8756 chr1 269117 269327 + 6.36 0.000 Intergenic MIR|SINE|MIR -62625 NR_026823 677784 Hs.722487 NR_026823 ENSG00000249054 FAM138D F379 family with sequence similarity 138 member D ncRNA chr22-3874 chr22 34365270 34365480 + 6.36 0.000 Intergenic Tigger9a|DNA|TcMar-Tigger -442487 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr10-6439 chr10 24737144 24737354 + 6.36 0.000 Intergenic LOR1b|LTR|ERV1 -13362 NM_020824 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr1-9055 chr1 14522535 14522745 + 6.36 0.000 Intergenic Intergenic -76045 NM_201628 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr6-6752 chr6 2911372 2911582 + 6.36 0.000 Intergenic Intergenic -8168 NM_004155 5272 Hs.104879 NM_004155 ENSG00000170542 SERPINB9 CAP-3|CAP3|PI-9|PI9 serpin family B member 9 protein-coding chr15-1465 chr15 98648410 98648620 + 6.36 0.000 promoter-TSS (NM_001291858) promoter-TSS (NM_001291858) -24 NM_000875 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding chr4-8664 chr4 178646166 178646376 + 6.36 0.000 Intergenic L1MA3|LINE|L1 -738335 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr11-10632 chr11 125459703 125459913 + 6.36 0.000 intron (NM_005103, intron 5 of 9) MIRb|SINE|MIR -35406 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr6-4611 chr6 44820720 44820930 + 6.36 0.000 intron (NR_146632, intron 11 of 11) L2a|LINE|L2 -268944 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr15-3245 chr15 75222613 75222823 + 6.36 0.000 Intergenic Intergenic 6972 NM_001321990 105376731 NM_001321990 LOC105376731 - taste receptor cell protein 1-like protein-coding chr15-4954 chr15 78601597 78601807 + 6.36 0.000 exon (NM_000743, exon 5 of 6) exon (NM_000743, exon 5 of 6) 19294 NR_046313 1136 Hs.89605 NM_000743 ENSG00000080644 CHRNA3 LNCR2|NACHRA3|PAOD2 cholinergic receptor nicotinic alpha 3 subunit protein-coding chr6-6394 chr6 79762547 79762757 + 6.36 0.000 Intergenic Intergenic 49594 NR_131786 89758 Hs.288213 NM_001243308 LINC01621 C6orf7 long intergenic non-protein coding RNA 1621 ncRNA chr17-7739 chr17 33900923 33901133 + 6.36 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 255778 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr2-13000 chr2 106555335 106555545 + 6.36 0.000 Intergenic Intergenic 68076 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr5-7852 chr5 72107443 72107653 + 6.36 0.000 promoter-TSS (NM_005909) promoter-TSS (NM_005909) 73 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr20-2615 chr20 40683120 40683330 + 6.36 0.000 Intergenic CpG 6011 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr15-4265 chr15 35086820 35087030 + 6.36 0.000 Intergenic FLAM_C|SINE|Alu -1517 NM_001355281 388112 Hs.635882 NM_001355281 ENSG00000255192 NANOGP8 NANOGP1|PN8 Nanog homeobox retrogene P8 protein-coding chr5-7128 chr5 850603 850813 + 6.36 0.000 5' UTR (NM_024786, exon 1 of 13) 5' UTR (NM_024786, exon 1 of 13) 278 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr2-11010 chr2 103440280 103440490 + 6.36 0.000 Intergenic L1MC5a|LINE|L1 -455956 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr22-3611 chr22 20472880 20473090 + 6.36 0.000 intron (NM_032775, intron 2 of 6) L2b|LINE|L2 22810 NM_032775 84861 Hs.517419 NM_032775 ENSG00000099910 KLHL22 KELCHL kelch like family member 22 protein-coding chr13-2473 chr13 50878772 50878982 + 6.36 0.000 Intergenic UCON28c|Unknown|Unknown -30801 NM_001142279 79621 Hs.306291 NM_024570 ENSG00000136104 RNASEH2B AGS2|DLEU8 ribonuclease H2 subunit B protein-coding chr1-9926 chr1 75970462 75970672 + 6.36 0.000 Intergenic Intergenic -38163 NR_026546 127247 Hs.125423 NM_080868 ENSG00000154007 ASB17 Asb-17 ankyrin repeat and SOCS box containing 17 protein-coding chrX-3778 chrX 133047477 133047687 + 6.36 0.000 Intergenic MER110A|LTR|ERV1 -19310 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding chr1-15168 chr1 107689108 107689318 + 6.36 0.000 promoter-TSS (NM_001079874) promoter-TSS (NM_001079874) -714 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr2-10312 chr2 144489020 144489230 + 6.36 0.000 intron (NM_001171653, intron 2 of 8) intron (NM_001171653, intron 2 of 8) -30489 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chr11-6744 chr11 82795273 82795483 + 6.36 0.000 Intergenic L2|LINE|L2 -61514 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr3-8873 chr3 10512134 10512344 + 6.36 0.000 intron (NM_001353564, intron 2 of 20) intron (NM_001353564, intron 2 of 20) -6653 NM_001683 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr19-6692 chr19 35557920 35558130 + 6.36 0.000 intron (NM_000704, intron 10 of 21) CpG-14286 5633 NM_000704 495 Hs.36992 NM_000704 ENSG00000105675 ATP4A ATP6A ATPase H+/K+ transporting subunit alpha protein-coding chrX-723 chrX 150366210 150366420 + 6.36 0.000 intron (NM_001177465, intron 1 of 4) intron (NM_001177465, intron 1 of 4) 2998 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr6-2666 chr6 6110795 6111005 + 6.36 0.000 Intergenic L1MA1|LINE|L1 -58434 NR_049863 100847034 NR_049863 ENSG00000283616 MIR5683 - microRNA 5683 ncRNA chr22-2950 chr22 48678560 48678770 + 6.36 0.000 intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) -101630 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr1-15099 chr1 99557878 99558088 + 6.36 0.000 intron (NR_031666, intron 1 of 4) intron (NR_031666, intron 1 of 4) -70179 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr2-12998 chr2 106389034 106389244 + 6.36 0.000 intron (NR_003506, intron 3 of 3) intron (NR_003506, intron 3 of 3) 7025 NR_003506 285189 Hs.143436 NR_003506 ENSG00000240935 PLGLA PLGLA1|PLGP2|PRGA plasminogen like A (pseudogene) pseudo chr3-4376 chr3 188954630 188954840 + 6.36 0.000 Intergenic Intergenic -7096 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr2-9960 chr2 6023717 6023927 + 6.36 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 41844 NR_026833 400940 Hs.378814 NM_207479 LOC400940 - uncharacterized LOC400940 ncRNA chr18-952 chr18 22940180 22940390 + 6.36 0.000 intron (NM_002894, intron 2 of 18) L1M3|LINE|L1 6409 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr2-10221 chr2 107463206 107463416 + 6.36 0.000 Intergenic Intergenic -66108 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA chr1-11757 chr1 19588466 19588676 + 6.36 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 8261 NR_135054 105378614 Hs.430098 NR_135054 ENSG00000235185 LOC105378614 - uncharacterized LOC105378614 ncRNA chr7-8828 chr7 85529998 85530208 + 6.36 0.000 Intergenic Intergenic 108981 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr11-10539 chr11 120326276 120326486 + 6.36 0.000 intron (NM_001198675, intron 1 of 1) intron (NM_001198675, intron 1 of 1) 1082 NM_001198674 219902 Hs.643516 NM_174926 ENSG00000181264 TLCD5 TMEM136 TLC domain containing 5 protein-coding chr4-8192 chr4 133237003 133237213 + 6.36 0.000 Intergenic LTR67B|LTR|ERVL 87814 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr2-5052 chr2 938332 938542 + 6.36 0.000 Intergenic Intergenic -12412 NM_018968 54221 Hs.595069 NM_018968 ENSG00000172554 SNTG2 G2SYN|SYN5 syntrophin gamma 2 protein-coding chr1-10959 chr1 212975429 212975639 + 6.36 0.000 intron (NM_001301056, intron 7 of 7) (CCCTTA)n|Simple_repeat|Simple_repeat 24993 NM_001136474 79805 Hs.96885 NM_024749 ENSG00000143494 VASH2 - vasohibin 2 protein-coding chr5-5965 chr5 114055255 114055465 + 6.36 0.000 Intergenic Intergenic -306710 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chrX-3030 chrX 79791670 79791880 + 6.36 0.000 Intergenic Intergenic -222978 NM_001109879 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr3-10396 chr3 129523713 129523923 + 6.36 0.000 Intergenic Intergenic -4821 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr4-8550 chr4 165526750 165526960 + 6.36 0.000 Intergenic L1MCc|LINE|L1 140613 NR_030304 693163 NR_030304 ENSG00000207559 MIR578 MIRN578|hsa-mir-578 microRNA 578 ncRNA chr4-7078 chr4 31770369 31770579 + 6.36 0.000 Intergenic Penelope1_Vert|LINE|Penelope -226905 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA chr17-6337 chr17 67608410 67608620 + 6.36 0.000 intron (NM_181671, intron 5 of 9) AluJo|SINE|Alu -109318 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr8-7357 chr8 136085514 136085724 + 6.36 0.000 Intergenic L1MA10|LINE|L1 -445179 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr8-4327 chr8 99915203 99915413 + 6.36 0.000 Intergenic AluJb|SINE|Alu -21601 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr16-4562 chr16 66780849 66781059 + 6.36 0.000 intron (NM_001136505, intron 9 of 18) L1M5|LINE|L1 20666 NM_001136505 283847 Hs.376505 NM_173616 ENSG00000249961 TERB1 CCDC79 telomere repeat binding bouquet formation protein 1 protein-coding chr3-6400 chr3 98732290 98732500 + 6.36 0.000 promoter-TSS (NM_006100) promoter-TSS (NM_006100) 159 NM_001323359 10402 Hs.148716 NM_006100 ENSG00000064225 ST3GAL6 SIAT10|ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding chr8-7007 chr8 109231968 109232178 + 6.36 0.000 Intergenic Intergenic 97860 NM_001128211 84955 Hs.380291 NM_032869 ENSG00000120526 NUDCD1 CML66|OVA66 NudC domain containing 1 protein-coding chr9-6198 chr9 94609069 94609279 + 6.36 0.000 intron (NM_000507, intron 4 of 6) AluSx1|SINE|Alu -15350 NM_003837 8789 Hs.61255 NM_003837 ENSG00000130957 FBP2 - fructose-bisphosphatase 2 protein-coding chr10-4827 chr10 12499254 12499464 + 6.36 0.000 intron (NM_001351032, intron 3 of 11) intron (NM_001351032, intron 3 of 11) -79394 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 - microRNA 4480 ncRNA chr21-1702 chr21 30585275 30585485 + 6.36 0.000 Intergenic MLT2B1|LTR|ERVL 5017 NM_001164434 100288287 Hs.580880 NM_001164434 ENSG00000206106 KRTAP22-2 KAP22.2 keratin associated protein 22-2 protein-coding chr16-3776 chr16 29751400 29751610 + 6.36 0.000 Intergenic AluJr|SINE|Alu -5515 NM_175900 283897 Hs.331095 NM_175900 ENSG00000185905 C16orf54 - chromosome 16 open reading frame 54 protein-coding chr16-4631 chr16 72635045 72635255 + 6.36 0.000 intron (NR_159372, intron 1 of 7) L1MEg|LINE|L1 29820 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr2-9841 chr2 165572093 165572303 + 6.36 0.000 promoter-TSS (NM_024969) promoter-TSS (NM_024969) -138 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr8-4021 chr8 58697862 58698072 + 6.36 0.000 Intergenic Harlequin-int|LTR|ERV1 -38114 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr11-5998 chr11 21188435 21188645 + 6.36 0.000 intron (NM_201551, intron 13 of 18) intron (NM_201551, intron 13 of 18) 518954 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr17-6414 chr17 2756511 2756721 + 6.36 0.000 Intergenic Intergenic -6964 NM_001355573 101928991 NM_001355573 CCDC92B - coiled-coil domain containing 92B protein-coding chr11-9274 chr11 44668126 44668336 + 6.36 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -58731 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr3-7590 chr3 10692589 10692799 + 6.36 0.000 Intergenic L2b|LINE|L2 -65887 NR_046766 100874325 Hs.143004 NR_046766 ENSG00000224771 ATP2B2-IT2 - ATP2B2 intronic transcript 2 ncRNA chr10-7139 chr10 100979862 100980072 + 6.36 0.000 exon (NM_001203244, exon 9 of 14) exon (NM_001203244, exon 9 of 14) 4982 NR_030339 693193 NR_030339 ENSG00000207551 MIR608 MIRN608|hsa-mir-608 microRNA 608 ncRNA chr8-4722 chr8 141508108 141508318 + 6.36 0.000 promoter-TSS (NM_207414).2 promoter-TSS (NM_207414).2 -983 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr21-1788 chr21 37975958 37976168 + 6.36 0.000 Intergenic MIR3|SINE|MIR -59606 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr11-6699 chr11 78202877 78203087 + 6.36 0.000 intron (NM_020798, intron 6 of 10) intron (NM_020798, intron 6 of 10) 14063 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr2-11477 chr2 232456286 232456496 + 6.36 0.000 exon (NM_001631, exon 2 of 11) exon (NM_001631, exon 2 of 11) 238 NM_001631 248 Hs.37009 NM_001631 ENSG00000163295 ALPI IAP alkaline phosphatase, intestinal protein-coding chr15-2490 chr15 100114176 100114386 + 6.36 0.000 intron (NM_139057, intron 13 of 21) intron (NM_139057, intron 13 of 21) 227694 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 WMS4 ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding chr7-7153 chr7 4754561 4754771 + 6.36 0.000 intron (NM_001037165, intron 3 of 8) CpG -20957 NM_014855 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 subunit zeta 1 protein-coding chr3-10929 chr3 173872088 173872298 + 6.36 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) 48603 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr15-2672 chr15 77765450 77765660 + 6.36 0.000 intron (NM_001301186, intron 2 of 5) HAL1|LINE|L1 21494 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr21-1575 chr21 14652859 14653069 + 6.36 0.000 Intergenic L1MA4|LINE|L1 -9857 NM_001256579 388813 Hs.334177 NM_001256579 LOC388813 - uncharacterized protein ENSP00000383407-like protein-coding chr11-10043 chr11 83450330 83450540 + 6.36 0.000 Intergenic Intergenic -164028 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr8-4847 chr8 34835051 34835261 + 6.36 0.000 intron (NR_125746, intron 3 of 3) MIR|SINE|MIR 51235 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr20-3005 chr20 47276777 47276987 + 6.36 0.000 intron (NM_001281774, intron 11 of 23) intron (NM_001281774, intron 11 of 23) -41620 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr4-2993 chr4 120829185 120829395 + 6.36 0.000 intron (NM_001300824, intron 3 of 13) L3|LINE|CR1 93576 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr8-6207 chr8 36905761 36905971 + 6.36 0.000 intron (NM_001031836, intron 20 of 26) intron (NM_001031836, intron 20 of 26) 121492 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr2-11420 chr2 219766805 219767015 + 6.36 0.000 Intergenic Intergenic 137979 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr12-5338 chr12 115672704 115672914 + 6.36 0.000 Intergenic Intergenic 475845 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr16-5603 chr16 56670677 56670887 + 6.36 0.000 intron (NM_005951, intron 2 of 2) intron (NM_005951, intron 2 of 2) 968 NM_005951 4496 Hs.438462 NM_005951 ENSG00000205358 MT1H MT-0|MT-1H|MT-IH|MT1 metallothionein 1H protein-coding chr9-6596 chr9 126665163 126665373 + 6.36 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 50825 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr1-10600 chr1 176929954 176930164 + 6.36 0.000 intron (NM_207108, intron 16 of 21) intron (NM_207108, intron 16 of 21) 99386 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr3-10440 chr3 132405165 132405375 + 6.36 0.000 Intergenic Intergenic -12232 NM_001329126 23317 Hs.12707 NM_015268 ENSG00000138246 DNAJC13 PARK21|RME8 DnaJ heat shock protein family (Hsp40) member C13 protein-coding chr11-10420 chr11 115562138 115562348 + 6.36 0.000 Intergenic Intergenic -57828 NM_014333 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr17-6272 chr17 39420065 39420275 + 6.36 0.000 intron (NM_004774, intron 13 of 16) intron (NM_004774, intron 13 of 16) -17614 NM_001370209 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr11-8737 chr11 8105823 8106033 + 6.36 0.000 TTS (NM_001346693) TTS (NM_001346693) 24566 NM_177972 7275 Hs.568986 NM_003320 ENSG00000166402 TUB RDOB|rd5 TUB bipartite transcription factor protein-coding chr17-3363 chr17 79296211 79296421 + 6.36 0.000 intron (NM_001082575, intron 3 of 14) (AC)n|Simple_repeat|Simple_repeat 219832 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr10-6478 chr10 43082941 43083151 + 6.36 0.000 intron (NM_020630, intron 1 of 18) intron (NM_020630, intron 1 of 18) 5977 NM_020975 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr7-6184 chr7 129114579 129114789 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -11587 NR_002144 407835 Hs.592273 NR_002144 LOC407835 - mitogen-activated protein kinase kinase 2 pseudogene pseudo chr13-2739 chr13 96821112 96821322 + 6.36 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 162955 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr1-16661 chr1 241853539 241853749 + 6.36 0.000 intron (NM_001319224, intron 5 of 14) intron (NM_001319224, intron 5 of 14) 4913 NM_006027 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr18-2213 chr18 63997722 63997932 + 6.36 0.000 intron (NM_001348367, intron 6 of 7) MER76-int|LTR|ERVL 27746 NM_001031848 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr8-4283 chr8 95652107 95652317 + 6.36 0.000 intron (NR_038205, intron 2 of 2) L2a|LINE|L2 296136 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr8-5860 chr8 13541255 13541465 + 6.36 0.000 intron (NM_001348082, intron 1 of 16) L1ME1|LINE|L1 -25509 NM_001007090 157773 Hs.104941 NM_001007090 ENSG00000164743 C8orf48 - chromosome 8 open reading frame 48 protein-coding chr16-6068 chr16 11403279 11403489 + 6.36 0.000 intron (NM_001370704, intron 48 of 66) intron (NM_001370704, intron 48 of 66) 57925 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr13-4004 chr13 70125808 70126018 + 6.36 0.000 intron (NR_002717, intron 2 of 4) intron (NR_002717, intron 2 of 4) -17420 NM_001286725 57626 Hs.508201 NM_020866 ENSG00000150361 KLHL1 MRP2 kelch like family member 1 protein-coding chr4-7240 chr4 45611537 45611747 + 6.36 0.000 Intergenic HERVH48-int|LTR|ERV1 512412 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding chr11-6791 chr11 88916876 88917086 + 6.36 0.000 intron (NM_001143831, intron 1 of 8) L1MA3|LINE|L1 131091 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr2-11094 chr2 127348303 127348513 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -5179 NM_006609 10746 Hs.145605 NM_006609 ENSG00000169967 MAP3K2 MEKK2|MEKK2B mitogen-activated protein kinase kinase kinase 2 protein-coding chr5-4205 chr5 118154031 118154241 + 6.36 0.000 intron (NR_104997, intron 2 of 2) intron (NR_104997, intron 2 of 2) -128438 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr3-6648 chr3 128442463 128442673 + 6.36 0.000 Intergenic ERVL-E-int|LTR|ERVL -21026 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr5-5761 chr5 172887310 172887520 + 6.36 0.000 intron (NM_001031711, intron 1 of 9) intron (NM_001031711, intron 1 of 9) -27668 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr11-10550 chr11 120832194 120832404 + 6.36 0.000 intron (NM_001282470, intron 6 of 19) MamRep38|DNA|hAT -13184 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr8-5402 chr8 27556496 27556706 + 6.36 0.000 Intergenic Intergenic 54150 NR_106902 102465508 NR_106902 ENSG00000284280 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA chr17-5534 chr17 43679708 43679918 + 6.36 0.000 Intergenic Intergenic -17891 NM_001040002 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr2-7823 chr2 46493555 46493765 + 6.36 0.000 Intergenic Intergenic 14095 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding chr8-5144 chr8 73918366 73918576 + 6.36 0.000 Intergenic AluSx1|SINE|Alu 39489 NR_147034 101926947 Hs.521636 NR_147034 LINC01617 C8orf23|NCRNA00249|XLOC_006844 long intergenic non-protein coding RNA 1617 ncRNA chr22-1771 chr22 28897949 28898159 + 6.36 0.000 intron (NM_001206998, intron 1 of 8) AluSx3|SINE|Alu 14482 NM_001206998 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr8-6494 chr8 64356510 64356720 + 6.36 0.000 intron (NR_125826, intron 1 of 4) AluSx|SINE|Alu 11943 NR_125826 102724623 Hs.586375 NR_125826 ENSG00000253554 LINC01414 - long intergenic non-protein coding RNA 1414 ncRNA chr10-6890 chr10 34734038 34734248 + 6.36 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 81153 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr5-6832 chr5 110536991 110537201 + 6.36 0.000 intron (NM_001039763, intron 11 of 13) HERV4_I-int|LTR|ERV1 -23181 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr7-4130 chr7 64569563 64569773 + 6.36 0.000 Intergenic CpG -5027 NR_077227 100128885 Hs.586332 NR_077227 LOC100128885 - uncharacterized LOC100128885 ncRNA chr1-11290 chr1 10601289 10601499 + 6.36 0.000 intron (NM_004565, intron 4 of 8) intron (NM_004565, intron 4 of 8) 126444 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr4-6751 chr4 5867768 5867978 + 6.36 0.000 intron (NM_001014809, intron 1 of 13) intron (NM_001014809, intron 1 of 13) 19940 NM_001288662 1400 Hs.135270 NM_001313 ENSG00000072832 CRMP1 CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 collapsin response mediator protein 1 protein-coding chrX-2207 chrX 41362533 41362743 + 6.36 0.000 intron (NR_126093, intron 18 of 18) L2b|LINE|L2 28472 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr3-6392 chr3 97037466 97037676 + 6.36 0.000 intron (NM_001080448, intron 3 of 17) L2c|LINE|L2 222977 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr7-2583 chr7 129476010 129476220 + 6.36 0.000 intron (NM_020704, intron 18 of 20) SVA_C|Retroposon|SVA -26416 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr16-6194 chr16 27064019 27064229 + 6.36 0.000 Intergenic Charlie4z|DNA|hAT-Charlie -2803 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr1-8926 chr1 7422532 7422742 + 6.36 0.000 intron (NM_001349608, intron 4 of 21) MIRb|SINE|MIR -32883 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr11-7011 chr11 117664798 117665008 + 6.36 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 132313 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr4-4805 chr4 106301758 106301968 + 6.36 0.000 intron (NM_001290768, intron 2 of 26) intron (NM_001290768, intron 2 of 26) -13747 NM_001142415 9255 Hs.591680 NM_004757 ENSG00000164022 AIMP1 EMAP2|EMAPII|HLD3|SCYE1|p43 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 protein-coding chr18-1478 chr18 61126544 61126754 + 6.36 0.000 Intergenic AluJo|SINE|Alu -206781 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr9-6355 chr9 16218451 16218661 + 6.36 0.000 intron (NM_001364979, intron 1 of 3) intron (NM_001364979, intron 1 of 3) 34551 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr20-1269 chr20 45178980 45179190 + 6.36 0.000 Intergenic Intergenic 4183 NM_002638 5266 Hs.112341 NM_002638 ENSG00000124102 PI3 ESI|SKALP|WAP3|WFDC14|cementoin peptidase inhibitor 3 protein-coding chr17-5742 chr17 58561964 58562174 + 6.36 0.000 intron (NM_031272, intron 28 of 31) AluSx|SINE|Alu -17741 NM_001038704 5414 Hs.287518 NM_004574 ENSG00000108387 SEPTIN4 ARTS|BRADEION|C17orf47|CE5B3|H5|MART|PNUTL2|SEP4|SEPT4|hCDCREL-2|hucep-7 septin 4 protein-coding chr1-7856 chr1 90133118 90133328 + 6.36 0.000 Intergenic MER91C|DNA|hAT-Tip100 138113 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr3-9136 chr3 31609456 31609666 + 6.36 0.000 intron (NM_178862, intron 5 of 15) intron (NM_178862, intron 5 of 15) 76636 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr5-3571 chr5 68713759 68713969 + 6.36 0.000 Intergenic Intergenic 316063 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr5-4957 chr5 77652118 77652328 + 6.36 0.000 Intergenic Intergenic -13526 NM_032109 23440 Hs.202247 NM_032109 ENSG00000171540 OTP - orthopedia homeobox protein-coding chr7-7258 chr7 30322160 30322370 + 6.36 0.000 intron (NM_147128, intron 1 of 4) intron (NM_147128, intron 1 of 4) -32375 NR_037513 100500883 NR_037513 ENSG00000283237 MIR550B1 - microRNA 550b-1 ncRNA chr12-7865 chr12 104960155 104960365 + 6.36 0.000 Intergenic L2b|LINE|L2 -1516 NM_001352169 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr2-13660 chr2 162084925 162085135 + 6.36 0.000 Intergenic MER34-int|LTR|ERV1 10173 NR_147697 100131604 NR_147697 LOC100131604 - uncharacterized LOC100131604 ncRNA chr8-5134 chr8 71991939 71992149 + 6.36 0.000 intron (NR_033652, intron 4 of 4) intron (NR_033652, intron 4 of 4) 83540 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr2-12889 chr2 98649474 98649684 + 6.36 0.000 intron (NM_001160154, intron 5 of 12) intron (NM_001160154, intron 5 of 12) 13894 NM_001160154 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding chr18-3147 chr18 40976866 40977076 + 6.36 0.000 Intergenic L1MA4A|LINE|L1 543706 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr2-10544 chr2 236833794 236834004 + 6.36 0.000 Intergenic Intergenic 222268 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr15-4647 chr15 64068966 64069176 + 6.36 0.000 Intergenic Intergenic -22586 NM_014326 23604 Hs.237886 NM_014326 ENSG00000035664 DAPK2 DRP-1|DRP1 death associated protein kinase 2 protein-coding chr2-13439 chr2 143375425 143375635 + 6.36 0.000 intron (NM_018460, intron 6 of 13) intron (NM_018460, intron 6 of 13) 246111 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr17-3836 chr17 42980208 42980418 + 6.36 0.000 promoter-TSS (NM_025267) promoter-TSS (NM_025267) 215 NM_001136042 100885850 Hs.317403 NM_025267 ENSG00000108825 PTGES3L-AARSD1 - PTGES3L-AARSD1 readthrough protein-coding chr4-6547 chr4 178127277 178127487 + 6.36 0.000 Intergenic Intergenic -219446 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr11-3868 chr11 78045923 78046133 + 6.36 0.000 intron (NM_001203262, intron 1 of 2) intron (NM_001203262, intron 1 of 2) 163 NM_001282406 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr8-6397 chr8 55622946 55623156 + 6.36 0.000 Intergenic Intergenic -102073 NR_134323 105375843 Hs.662416 NR_134323 ENSG00000254357 LOC105375843 - uncharacterized LOC105375843 ncRNA chr10-8348 chr10 80041256 80041466 + 6.36 0.000 Intergenic Intergenic -37285 NM_001270372 80195 Hs.169982 NM_025125 ENSG00000133678 TMEM254 C10orf57|bA369J21.6 transmembrane protein 254 protein-coding chr5-8223 chr5 108989969 108990179 + 6.36 0.000 intron (NR_146155, intron 13 of 19) intron (NR_146155, intron 13 of 19) 65468 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr1-16232 chr1 209566228 209566438 + 6.36 0.000 Intergenic Intergenic -17381 NM_020439 57172 Hs.199068 NM_020439 ENSG00000008118 CAMK1G CLICK3|CLICKIII|VWS1|dJ272L16.1 calcium/calmodulin dependent protein kinase IG protein-coding chr11-7755 chr11 77117850 77118060 + 6.36 0.000 intron (NM_004055, intron 7 of 12) MIR|SINE|MIR -10291 NM_001369365 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr9-3132 chr9 92950573 92950783 + 6.36 0.000 intron (NM_001083536, intron 1 of 17) intron (NM_001083536, intron 1 of 17) 3155 NM_001083536 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr14-4241 chr14 101186311 101186521 + 6.36 0.000 Intergenic L1ME3A|LINE|L1 65560 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr10-6897 chr10 37746938 37747148 + 6.36 0.000 Intergenic Intergenic 48132 NR_051997 100419868 Hs.741719 NR_051997 ZNF33BP1 - zinc finger protein 33B pseudogene 1 pseudo chr14-5195 chr14 94950775 94950985 + 6.36 0.000 Intergenic Intergenic 180238 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr8-4377 chr8 102561319 102561529 + 6.36 0.000 TTS (NM_024410) TTS (NM_024410) 9835 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chrX-5010 chrX 118872528 118872738 + 6.36 0.000 intron (NR_110393, intron 6 of 6) intron (NR_110393, intron 6 of 6) 33077 NR_110393 101928287 Hs.496647 NR_110393 ENSG00000203650 LINC01285 - long intergenic non-protein coding RNA 1285 ncRNA chrX-5175 chrX 133160853 133161063 + 6.36 0.000 Intergenic L1PA7|LINE|L1 57396 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chrX-3940 chrX 10098414 10098624 + 6.36 0.000 exon (NM_015691, exon 8 of 23) exon (NM_015691, exon 8 of 23) -58426 NM_001256944 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chr17-5337 chr17 28897572 28897782 + 6.36 0.000 promoter-TSS (NM_001330170) promoter-TSS (NM_001330170) 56 NM_004475 2319 Hs.514038 NM_004475 ENSG00000132589 FLOT2 ECS-1|ECS1|ESA|ESA1|M17S1 flotillin 2 protein-coding chr1-8187 chr1 20549793 20550003 + 6.36 0.000 Intergenic AluSz6|SINE|Alu -2675 NM_207334 163933 Hs.429179 NM_207334 ENSG00000183114 FAM43B - family with sequence similarity 43 member B protein-coding chr4-7571 chr4 79015100 79015310 + 6.36 0.000 intron (NR_038342, intron 2 of 5) MER3|DNA|hAT-Charlie 43457 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA KI270832.1-5 KI270832.1 175933 176143 + 6.36 0.000 NA NA NA NA chr6-5543 chr6 168982397 168982607 + 6.36 0.000 Intergenic L1M3|LINE|L1 -18120 NR_136250 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr3-10446 chr3 132780331 132780541 + 6.36 0.000 intron (NR_002811, intron 3 of 10) LTR16A|LTR|ERVL -57977 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr22-3702 chr22 24775928 24776138 + 6.36 0.000 Intergenic LTR8|LTR|ERV1 -1313 NR_045649 440822 Hs.448343 NM_001008496 ENSG00000184571 PIWIL3 HIWI3 piwi like RNA-mediated gene silencing 3 protein-coding chr15-3240 chr15 74816244 74816454 + 6.36 0.000 intron (NM_021819, intron 2 of 13) intron (NM_021819, intron 2 of 13) 3514 NM_021819 79748 Hs.620644 NM_021819 ENSG00000140506 LMAN1L ERGIC-53L|ERGL lectin, mannose binding 1 like protein-coding chr22-1557 chr22 38122168 38122378 + 6.36 0.000 intron (NM_001199562, intron 10 of 15) intron (NM_001199562, intron 10 of 15) -11589 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr17-5563 chr17 44818569 44818779 + 6.36 0.000 intron (NM_001080383, intron 1 of 2) AluSg|SINE|Alu 11613 NM_005497 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr6-4977 chr6 107059250 107059460 + 6.36 0.000 Intergenic Intergenic 31156 NM_001142470 51250 Hs.486084 NM_016487 ENSG00000130349 C6orf203 HSPC230|PRED31 chromosome 6 open reading frame 203 protein-coding chr22-3894 chr22 35536691 35536901 + 6.36 0.000 Intergenic MER5A|DNA|hAT-Charlie -3698 NM_001366725 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding chr5-5413 chr5 136187897 136188107 + 6.36 0.000 Intergenic L2b|LINE|L2 5160 NM_001350994 389332 Hs.127680 NM_001350994 ENSG00000271824 SMIM32 - small integral membrane protein 32 protein-coding chr5-8187 chr5 105338151 105338361 + 6.36 0.000 Intergenic AluSz|SINE|Alu 238782 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr7-9025 chr7 101434840 101435050 + 6.36 0.000 intron (NM_133457, intron 2 of 12) intron (NM_133457, intron 2 of 12) 72070 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr11-4433 chr11 94401125 94401335 + 6.36 0.000 exon (NM_001330345, exon 1 of 3) exon (NM_001330345, exon 1 of 3) 189 NM_001330345 10888 Hs.272385 NM_016540 ENSG00000123901 GPR83 GIR|GPR72 G protein-coupled receptor 83 protein-coding chr14-4865 chr14 70462021 70462231 + 6.36 0.000 Intergenic Intergenic 9952 NM_003813 8747 Hs.178748 NM_003813 ENSG00000139985 ADAM21 ADAM 21|ADAM31 ADAM metallopeptidase domain 21 protein-coding chr4-7646 chr4 84310942 84311152 + 6.36 0.000 Intergenic Intergenic -11878 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr11-8662 chr11 3588919 3589129 + 6.36 0.000 Intergenic LTR12C|LTR|ERV1 -17037 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA GL000225.1-53 GL000225.1 196887 197047 + 6.36 0.000 NA NA NA NA chr2-12012 chr2 28421660 28421870 + 6.36 0.000 Intergenic AluSz|SINE|Alu -27093 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr2-6733 chr2 32552563 32552773 + 6.36 0.000 intron (NM_016252, intron 65 of 73) intron (NM_016252, intron 65 of 73) 20515 NR_030285 693143 NR_030285 ENSG00000207653 MIR558 MIRN558|hsa-mir-558 microRNA 558 ncRNA chr16-6130 chr16 19779144 19779354 + 6.36 0.000 intron (NM_001305122, intron 7 of 8) L2|LINE|L2 -61022 NM_001348534 400506 Hs.585209 NM_001012991 ENSG00000103550 KNOP1 101F10.1|C16orf88|FAM191A|TSG118 lysine rich nucleolar protein 1 protein-coding chr17-7500 chr17 16881585 16881795 + 6.36 0.000 Intergenic Intergenic -35818 NR_146392 147228 Hs.565076 NM_001349721 KRT17P1 - keratin 17 pseudogene 1 pseudo chr19-7101 chr19 57357492 57357702 + 6.36 0.000 exon (NM_001290319, exon 4 of 4) exon (NM_001290319, exon 4 of 4) -5838 NM_173631 284306 Hs.446620 NM_173631 ENSG00000152433 ZNF547 MIP-2A|SEDLP1|TRAPPC2.19|TRAPPC2B|TRAPPC2P1 zinc finger protein 547 protein-coding chr6-7959 chr6 112150065 112150275 + 6.36 0.000 intron (NM_001105206, intron 17 of 38) intron (NM_001105206, intron 17 of 38) 62579 NM_001033564 619208 Hs.591340 NM_001033564 ENSG00000203778 FAM229B C6orf225 family with sequence similarity 229 member B protein-coding chr9-5299 chr9 85358854 85359064 + 6.36 0.000 Intergenic L1PB2|LINE|L1 383070 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr22-1601 chr22 19910095 19910305 + 6.36 0.000 intron (NR_147957, intron 7 of 16) intron (NR_147957, intron 7 of 16) 22353 NM_001352301 10587 Hs.443430 NM_006440 ENSG00000184470 TXNRD2 GCCD5|SELZ|TR|TR-BETA|TR3|TRXR2 thioredoxin reductase 2 protein-coding chr14-3851 chr14 76562204 76562414 + 6.36 0.000 Intergenic Intergenic 190962 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chrX-3502 chrX 40863025 40863235 + 6.36 0.000 Intergenic SVA_A|Retroposon|SVA -29934 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo chr10-9116 chr10 126945134 126945344 + 6.36 0.000 intron (NM_001290223, intron 1 of 51) MLT1F2|LTR|ERVL-MaLR 39830 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr22-3886 chr22 35331542 35331752 + 6.36 0.000 intron (NR_156428, intron 7 of 13) AluSx1|SINE|Alu -3993 NR_037471 100500826 NR_037471 ENSG00000266320 MIR3909 mir-3909 microRNA 3909 ncRNA chr6-5791 chr6 6164526 6164736 + 6.36 0.000 intron (NM_000129, intron 13 of 14) (TTCTC)n|Simple_repeat|Simple_repeat -4703 NR_049863 100847034 NR_049863 ENSG00000283616 MIR5683 - microRNA 5683 ncRNA chr16-5483 chr16 6539854 6540064 + 6.36 0.000 intron (NM_018723, intron 2 of 15) intron (NM_018723, intron 2 of 15) -233850 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr4-8691 chr4 181137723 181137933 + 6.36 0.000 intron (NR_033918, intron 2 of 2) LTR16B2|LTR|ERVL 21321 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr3-6818 chr3 146525017 146525227 + 6.36 0.000 intron (NM_001363872, intron 4 of 7) intron (NM_001363872, intron 4 of 7) 19433 NM_001363872 5359 Hs.130759 NM_021105 ENSG00000188313 PLSCR1 MMTRA1B phospholipid scramblase 1 protein-coding chr4-5717 chr4 40897933 40898143 + 6.36 0.000 intron (NM_173075, intron 9 of 16) MIRb|SINE|MIR -40846 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr22-1616 chr22 25445531 25445741 + 6.36 0.000 Intergenic Intergenic -2451 NR_033733 1416 Hs.571835 NR_033733 ENSG00000100058 CRYBB2P1 CRYB2B crystallin beta B2 pseudogene 1 pseudo chr18-3098 chr18 35222137 35222347 + 6.36 0.000 Intergenic LTR7|LTR|ERV1 -18792 NM_032347 84307 Hs.591061 NM_032347 ENSG00000186812 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding chr19-7107 chr19 58200447 58200657 + 6.36 0.000 intron (NM_133502, intron 4 of 7) L2a|LINE|L2 17491 NM_133502 10782 Hs.83761 NM_016324 ENSG00000171606 ZNF274 HFB101|ZF2|ZKSCAN19|ZSCAN51 zinc finger protein 274 protein-coding chr6-8268 chr6 139173577 139173787 + 6.36 0.000 intron (NM_016217, intron 2 of 3) intron (NM_016217, intron 2 of 3) 38602 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding chr13-4357 chr13 104194512 104194722 + 6.36 0.000 Intergenic THE1A|LTR|ERVL-MaLR 769417 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr1-7826 chr1 62881328 62881538 + 6.36 0.000 Intergenic Intergenic 97301 NM_032852 84938 Hs.7353 NM_032852 ENSG00000125703 ATG4C APG4-C|APG4C|AUTL1|AUTL3 autophagy related 4C cysteine peptidase protein-coding chr2-6484 chr2 172463470 172463680 + 6.36 0.000 TTS (NR_157573) TTS (NR_157573) 2447 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr21-1876 chr21 43297521 43297731 + 6.36 0.000 Intergenic Intergenic 34413 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr2-5507 chr2 147123587 147123797 + 6.36 0.000 Intergenic L1PB|LINE|L1 536635 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr10-4769 chr10 4470210 4470420 + 6.36 0.000 Intergenic Intergenic 63846 NR_108056 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr12-6204 chr12 23395815 23396025 + 6.36 0.000 Intergenic Intergenic 188666 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr16-6707 chr16 71607171 71607381 + 6.36 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -18908 NM_052858 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chr3-7502 chr3 160811790 160812000 + 6.36 0.000 intron (NM_139245, intron 1 of 3) intron (NM_139245, intron 1 of 3) -30254 NM_001317912 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr1-10331 chr1 152886329 152886539 + 6.36 0.000 Intergenic Intergenic 8112 NM_030663 4184 Hs.111850 NM_030663 ENSG00000163206 SMCP HSMCSGEN1|MCS|MCSP sperm mitochondria associated cysteine rich protein protein-coding chr14-4300 chr14 20898463 20898673 + 6.36 0.000 Intergenic L1PA5|LINE|L1 7165 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding chr6-6292 chr6 39304560 39304770 + 6.36 0.000 intron (NM_001135111, intron 2 of 5) intron (NM_001135111, intron 2 of 5) 9754 NM_001135111 89822 Hs.162282 NM_031460 ENSG00000124780 KCNK17 K2p17.1|TALK-2|TALK2|TASK-4|TASK4 potassium two pore domain channel subfamily K member 17 protein-coding chrX-5009 chrX 118756348 118756558 + 6.36 0.000 intron (NM_001560, intron 4 of 10) intron (NM_001560, intron 4 of 10) 28847 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr14-3983 chr14 33743046 33743256 + 6.36 0.000 intron (NM_001165893, intron 6 of 10) Tigger1|DNA|TcMar-Tigger 34214 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr7-7708 chr7 159063885 159064095 + 6.36 0.000 intron (NR_130758, intron 4 of 12) intron (NR_130758, intron 4 of 12) 33214 NM_001308259 7434 Hs.585052 NM_003382 ENSG00000106018 VIPR2 C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R vasoactive intestinal peptide receptor 2 protein-coding chr15-3164 chr15 68312802 68313012 + 6.36 0.000 intron (NM_001004439, intron 23 of 29) intron (NM_001004439, intron 23 of 29) 35162 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr16-3451 chr16 154336 154546 + 6.36 0.000 TTS (NM_005332) TTS (NM_005332) 1797 NM_005332 3050 Hs.585357 NM_005332 ENSG00000130656 HBZ HBAZ|HBZ-T1|HBZ1 hemoglobin subunit zeta protein-coding chr19-6477 chr19 17520959 17521169 + 6.36 0.000 exon (NM_012088, exon 5 of 5) exon (NM_012088, exon 5 of 5) -2237 NM_001098524 199786 Hs.434133 NM_173544 ENSG00000167483 NIBAN3 BCNP1|FAM129C niban apoptosis regulator 3 protein-coding chr6-7771 chr6 95956630 95956840 + 6.36 0.000 Intergenic Intergenic -59239 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr10-5721 chr10 101112085 101112295 + 6.36 0.000 intron (NR_130723, intron 2 of 2) AluY|SINE|Alu 18956 NR_130723 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr5-4570 chr5 23102761 23102971 + 6.36 0.000 Intergenic AluSx3|SINE|Alu -249522 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr12-7911 chr12 108320650 108320860 + 6.36 0.000 promoter-TSS (NM_001142345) promoter-TSS (NM_001142345) -93 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr10-7688 chr10 29396901 29397111 + 6.36 0.000 Intergenic Intergenic -12528 NR_110926 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr17-6263 chr17 34585002 34585212 + 6.36 0.000 intron (NM_001304438, intron 1 of 8) intron (NM_001304438, intron 1 of 8) 4358 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr5-9129 chr5 175222228 175222438 + 6.36 0.000 Intergenic Intergenic 221849 NM_000794 1812 Hs.2624 NM_000794 ENSG00000184845 DRD1 DADR|DRD1A dopamine receptor D1 protein-coding chr22-2473 chr22 20725196 20725406 + 6.36 0.000 intron (NM_058004, intron 42 of 54) intron (NM_058004, intron 42 of 54) 24187 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chr18-3331 chr18 56583649 56583859 + 6.36 0.000 Intergenic AluSg|SINE|Alu 54838 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding GL000214.1-5 GL000214.1 133176 133386 + 6.36 0.000 NA NA NA NA chr4-7558 chr4 78155788 78155998 + 6.36 0.000 intron (NM_001166133, intron 2 of 41) intron (NM_001166133, intron 2 of 41) 98323 NM_001166133 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr10-4450 chr10 71953879 71954089 + 6.36 0.000 Intergenic HERVFH21-int|LTR|ERV1 -10411 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr11-10546 chr11 120606711 120606921 + 6.36 0.000 intron (NM_001282470, intron 1 of 19) L2c|LINE|L2 42380 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr14-5104 chr14 88337997 88338207 + 6.36 0.000 Intergenic MSTA|LTR|ERVL-MaLR -11190 NM_021161 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr14-1282 chr14 86999221 86999431 + 6.36 0.000 Intergenic Intergenic 93548 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr17-6441 chr17 8532360 8532570 + 6.36 0.000 intron (NM_001256012, intron 16 of 42) intron (NM_001256012, intron 16 of 42) 96581 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr10-5216 chr10 62367628 62367838 + 6.36 0.000 intron (NR_104162, intron 1 of 3) AluSz|SINE|Alu -6424 NM_199450 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr11-6148 chr11 42212491 42212701 + 6.36 0.000 intron (NR_038309, intron 4 of 5) MSTB-int|LTR|ERVL-MaLR 41094 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr2-7388 chr2 7151095 7151305 + 6.36 0.000 Intergenic MLT2C1|LTR|ERVL -73320 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr13-4322 chr13 101245997 101246207 + 6.36 0.000 intron (NM_001350749, intron 11 of 43) MER51A|LTR|ERV1 170406 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr3-9121 chr3 30690390 30690600 + 6.36 0.000 intron (NM_001024847, intron 7 of 7) intron (NM_001024847, intron 7 of 7) 83894 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr2-9727 chr2 64912959 64913169 + 6.36 0.000 intron (NR_036586, intron 1 of 2) MLT1I|LTR|ERVL-MaLR 19383 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr18-3197 chr18 46253811 46254021 + 6.36 0.000 intron (NM_001008239, intron 3 of 3) intron (NM_001008239, intron 3 of 3) 79882 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr8-5174 chr8 99395030 99395240 + 6.36 0.000 intron (NM_017890, intron 21 of 61) L1MEc|LINE|L1 141595 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA chr20-4251 chr20 48823089 48823299 + 6.36 0.000 intron (NM_020820, intron 1 of 39) intron (NM_020820, intron 1 of 39) 4805 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chrX-5345 chrX 148497904 148498114 + 6.36 0.000 Intergenic Intergenic -2608 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr22-3890 chr22 35413709 35413919 + 6.36 0.000 intron (NM_006739, intron 8 of 16) intron (NM_006739, intron 8 of 16) 13674 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|MGORS8|P1-CDC46 minichromosome maintenance complex component 5 protein-coding chr10-6969 chr10 68036886 68037096 + 6.36 0.000 intron (NM_001278185, intron 5 of 23) L2c|LINE|L2 -26108 NR_131184 100009667 NR_131184 POU5F1P5 Oct4-pg5 POU class 5 homeobox 1 pseudogene 5 pseudo chr14-4996 chr14 76604511 76604721 + 6.36 0.000 Intergenic MER21C|LTR|ERVL -156852 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr1-15564 chr1 159088211 159088421 + 6.36 0.000 Intergenic Intergenic -11415 NM_001348247 9447 Hs.733411 NM_004833 ENSG00000163568 AIM2 PYHIN4 absent in melanoma 2 protein-coding chr11-5777 chr11 4643765 4643975 + 6.36 0.000 promoter-TSS (NM_152430) promoter-TSS (NM_152430) -112 NM_152430 143503 Hs.470038 NM_152430 ENSG00000180785 OR51E1 D-GPCR|DGPCR|GPR136|GPR164|OR51E1P|OR52A3P|POGR|PSGR2 olfactory receptor family 51 subfamily E member 1 protein-coding chr1-14898 chr1 82741177 82741387 + 6.36 0.000 Intergenic Intergenic -161901 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr4-7085 chr4 32162565 32162775 + 6.36 0.000 Intergenic L2a|LINE|L2 -140248 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA chr15-4729 chr15 68012852 68013062 + 6.36 0.000 Intergenic Intergenic -41222 NM_016166 8554 Hs.162458 NM_016166 ENSG00000033800 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT 1 protein-coding chr2-5244 chr2 49139482 49139692 + 6.36 0.000 intron (NM_000145, intron 1 of 9) intron (NM_000145, intron 1 of 9) 14928 NM_181446 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding chr10-5301 chr10 70025510 70025720 + 6.36 0.000 Intergenic L1PB1|LINE|L1 -27231 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr5-7785 chr5 63655576 63655786 + 6.36 0.000 Intergenic Intergenic 306611 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr21-664 chr21 42843251 42843461 + 6.36 0.000 intron (NM_033661, intron 11 of 11) L1ME3A|LINE|L1 35919 NM_001260477 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr8-4094 chr8 68712169 68712379 + 6.36 0.000 intron (NR_146187, intron 9 of 13) L1PB1|LINE|L1 -380783 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr8-6501 chr8 65280926 65281136 + 6.36 0.000 Intergenic L1PA16|LINE|L1 -100691 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA chr18-3554 chr18 76924986 76925196 + 6.36 0.000 intron (NM_001306089, intron 21 of 30) intron (NM_001306089, intron 21 of 30) 91964 NM_001025081 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr1-4510 chr1 31413463 31413673 + 6.36 0.000 promoter-TSS (NM_018565) promoter-TSS (NM_018565) -245 NM_001199039 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr14-5456 chr14 105516656 105516866 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -9822 NM_025268 80757 Hs.157527 NM_025268 ENSG00000184986 TMEM121 TMEM121A|hole transmembrane protein 121 protein-coding chr4-6136 chr4 27630404 27630614 + 6.36 0.000 Intergenic Intergenic 413030 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr11-5533 chr11 92579658 92579868 + 6.36 0.000 intron (NM_001008781, intron 2 of 24) intron (NM_001008781, intron 2 of 24) 227667 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr2-5936 chr2 27225118 27225328 + 6.36 0.000 exon (NM_004341, exon 11 of 44) exon (NM_004341, exon 11 of 44) 7833 NM_001306079 790 Hs.377010 NM_004341 ENSG00000084774 CAD CDG1Z|EIEE50|GATD4 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase protein-coding chr12-6801 chr12 10747679 10747889 + 6.36 0.000 Intergenic L1PA6|LINE|L1 -2450 NR_120463 101928162 Hs.112950 NR_120463 ENSG00000256888 LINC02366 - long intergenic non-protein coding RNA 2366 ncRNA chr3-5641 chr3 11085711 11085921 + 6.36 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -51422 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr3-8553 chr3 149362531 149362741 + 6.36 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 15013 NM_014220 4071 Hs.351316 NM_014220 ENSG00000169908 TM4SF1 H-L6|L6|M3S1|TAAL6 transmembrane 4 L six family member 1 protein-coding chr2-14542 chr2 230234212 230234422 + 6.36 0.000 intron (NM_001278453, intron 1 of 23) MLT1I|LTR|ERVL-MaLR 8581 NM_001005176 11262 Hs.632549 NM_007237 ENSG00000079263 SP140 LYSP100|LYSP100-A|LYSP100-B SP140 nuclear body protein protein-coding chr2-4868 chr2 106886011 106886221 + 6.36 0.000 promoter-TSS (NM_001142351) promoter-TSS (NM_001142351) 51 NM_001142351 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr1-9445 chr1 34452824 34453034 + 6.36 0.000 Intergenic Intergenic 216765 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr9-6860 chr9 78097301 78097511 + 6.36 0.000 Intergenic Intergenic -65595 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr20-3278 chr20 5817664 5817874 + 6.36 0.000 intron (NM_001303478, intron 3 of 3) L1MEc|LINE|L1 67368 NM_152504 149840 Hs.529340 NM_152504 ENSG00000171984 SHLD1 C20orf196|RINN3 shieldin complex subunit 1 protein-coding chrX-5323 chrX 145658051 145658261 + 6.36 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -159673 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr17-7729 chr17 33498523 33498733 + 6.36 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 35132 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr16-4215 chr16 12774698 12774908 + 6.36 0.000 intron (NM_018340, intron 2 of 3) MSTC|LTR|ERVL-MaLR 29084 NM_018340 55313 Hs.460002 NM_018340 ENSG00000103381 CPPED1 CSTP1 calcineurin like phosphoesterase domain containing 1 protein-coding chr19-3673 chr19 10298035 10298245 + 6.36 0.000 Intergenic AluSz|SINE|Alu 8188 NM_003259 7087 Hs.465862 NM_003259 ENSG00000105376 ICAM5 TLCN|TLN intercellular adhesion molecule 5 protein-coding chr9-8176 chr9 106026447 106026657 + 6.36 0.000 Intergenic Intergenic 332011 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr7-9293 chr7 126958408 126958618 + 6.36 0.000 intron (NM_001371085, intron 3 of 10) MER52A|LTR|ERV1 99671 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr19-4332 chr19 1685226 1685436 + 6.36 0.000 Intergenic Intergenic -32716 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr8-5690 chr8 124237762 124237972 + 6.36 0.000 intron (NR_125420, intron 1 of 2) MIR|SINE|MIR 9531 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr20-2617 chr20 40773372 40773582 + 6.36 0.000 Intergenic Intergenic -58854 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr18-3200 chr18 46321984 46322194 + 6.36 0.000 Intergenic Intergenic -11929 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr9-6545 chr9 116497046 116497256 + 6.36 0.000 intron (NM_014010, intron 18 of 21) LTR16E1|LTR|ERVL -7132 NR_033973 100128505 Hs.675821 NR_033973 ENSG00000229105 ASTN2-AS1 - ASTN2 antisense RNA 1 ncRNA chr19-4615 chr19 13238336 13238546 + 6.36 0.000 intron (NM_023035, intron 31 of 46) L2b|LINE|L2 88030 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr15-4050 chr15 65664119 65664329 + 6.36 0.000 intron (NM_005848, intron 31 of 31) intron (NM_005848, intron 31 of 31) 21345 NM_001254740 9187 Hs.173092 NM_004727 ENSG00000074621 SLC24A1 CSNB1D|HsT17412|NCKX|NCKX1|RODX solute carrier family 24 member 1 protein-coding chr8-6065 chr8 25583629 25583839 + 6.36 0.000 Intergenic Intergenic 124501 NM_152562 157313 Hs.33366 NM_152562 ENSG00000184661 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding chr7-6556 chr7 54414223 54414433 + 6.36 0.000 Intergenic L1MA9|LINE|L1 83631 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr5-7061 chr5 171332913 171333123 + 6.36 0.000 Intergenic MER45A|DNA|hAT-Tip100 23770 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr9-7258 chr9 5231181 5231391 + 6.36 0.000 promoter-TSS (NM_002195) promoter-TSS (NM_002195) -133 NM_002195 3641 Hs.418506 NM_002195 ENSG00000120211 INSL4 EPIL|PLACENTIN insulin like 4 protein-coding chr17-5940 chr17 75839211 75839421 + 6.36 0.000 intron (NM_199242, intron 12 of 31) AluSp|SINE|Alu 5401 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr13-4053 chr13 75298815 75299025 + 6.36 0.000 intron (NM_001286658, intron 16 of 19) intron (NM_001286658, intron 16 of 19) 58332 NR_132375 106144536 Hs.591226 NR_132375 LINC01078 - long intergenic non-protein coding RNA 1078 ncRNA chr22-3271 chr22 46610342 46610552 + 6.36 0.000 intron (NM_001366660, intron 1 of 17) MER58A|DNA|hAT-Charlie -9939 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr18-3522 chr18 75265034 75265244 + 6.36 0.000 intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 53610 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr4-5856 chr4 117974151 117974361 + 6.36 0.000 Intergenic Intergenic -59066 NR_146513 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chr16-5622 chr16 59787922 59788132 + 6.36 0.000 Intergenic L1MA8|LINE|L1 -32836 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr1-14513 chr1 50795525 50795735 + 6.36 0.000 intron (NM_007051, intron 3 of 18) intron (NM_007051, intron 3 of 18) 164637 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr5-6613 chr5 37711133 37711343 + 6.36 0.000 intron (NM_001345998, intron 13 of 17) intron (NM_001345998, intron 13 of 17) 123584 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chrX-2057 chrX 18798303 18798513 + 6.36 0.000 intron (NM_152226, intron 13 of 17) MIRb|SINE|MIR -91888 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr2-8069 chr2 73813076 73813286 + 6.36 0.000 intron (NM_001353344, intron 1 of 2) intron (NM_001353344, intron 1 of 2) 4442 NM_001353344 388960 Hs.456833 NM_001080474 ENSG00000187833 C2orf78 COG5373|hCG1989538 chromosome 2 open reading frame 78 protein-coding chr13-3911 chr13 55316216 55316426 + 6.36 0.000 Intergenic Intergenic 141867 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr1-8667 chr1 208534533 208534743 + 6.36 0.000 Intergenic Intergenic -194050 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr12-4466 chr12 15506224 15506434 + 6.36 0.000 intron (NM_030667, intron 6 of 26) MIR3|SINE|MIR -40282 NM_030669 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr8-3039 chr8 141216049 141216259 + 6.36 0.000 intron (NM_001286646, intron 5 of 7) intron (NM_001286646, intron 5 of 7) 12420 NM_001286648 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr13-2709 chr13 93189071 93189281 + 6.36 0.000 Intergenic L1MB1|LINE|L1 -37631 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr11-8893 chr11 15458311 15458521 + 6.36 0.000 Intergenic Intergenic -185469 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr14-4506 chr14 38193306 38193516 + 6.36 0.000 Intergenic HERVH-int|LTR|ERV1 -14493 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr20-2319 chr20 9022546 9022756 + 6.36 0.000 Intergenic Intergenic -46403 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr11-8732 chr11 7600424 7600634 + 6.36 0.000 intron (NM_001351860, intron 3 of 21) intron (NM_001351860, intron 3 of 21) 3343 NM_001256568 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr17-5261 chr17 18911016 18911226 + 6.36 0.000 exon (NM_002767, exon 9 of 12) exon (NM_002767, exon 9 of 12) -39555 NM_001282417 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr8-4687 chr8 139701594 139701804 + 6.36 0.000 intron (NR_104210, intron 1 of 3) intron (NR_104210, intron 1 of 3) 1424 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr12-2788 chr12 70798592 70798802 + 6.36 0.000 intron (NM_002849, intron 2 of 13) L2a|LINE|L2 -9777 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr1-15160 chr1 106997563 106997773 + 6.36 0.000 Intergenic L1HS|LINE|L1 -59006 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr2-13263 chr2 127143077 127143287 + 6.36 0.000 Intergenic Intergenic -36028 NM_139345 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr2-14223 chr2 209886382 209886592 + 6.36 0.000 intron (NM_032504, intron 25 of 63) intron (NM_032504, intron 25 of 63) 114494 NM_032504 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr11-8718 chr11 6785115 6785325 + 6.36 0.000 exon (NM_001004489, exon 1 of 1) exon (NM_001004489, exon 1 of 1) 203 NM_001004489 144125 Hs.553608 NM_001004489 ENSG00000279486 OR2AG1 OR11-79|OR2AG3 olfactory receptor family 2 subfamily AG member 1 (gene/pseudogene) protein-coding chr21-1567 chr21 13876229 13876439 + 6.36 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -27970 NR_026755 54055 Hs.580910 NR_026755 ENSG00000228314 CYP4F29P 4F-se4[6:7:8]|C21orf15|CYP4F-se4[6:7:8]|CYP4F3LP cytochrome P450 family 4 subfamily F member 29, pseudogene pseudo chr7-8720 chr7 75671454 75671664 + 6.36 0.000 intron (NM_005338, intron 1 of 30) L1MB3|LINE|L1 67382 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr7-4660 chr7 33338990 33339200 + 6.36 0.000 intron (NM_198428, intron 10 of 22) MLT1J|LTR|ERVL-MaLR 209531 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr16-4832 chr16 87601703 87601913 + 6.36 0.000 promoter-TSS (NR_073379) promoter-TSS (NR_073379) -27 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr8-6375 chr8 53633527 53633737 + 6.36 0.000 Intergenic MER54B|LTR|ERVL -109667 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr3-8694 chr3 185811715 185811925 + 6.36 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) 9311 NM_001291873 10644 Hs.35354 NM_006548 ENSG00000073792 IGF2BP2 IMP-2|IMP2|VICKZ2 insulin like growth factor 2 mRNA binding protein 2 protein-coding chr13-2128 chr13 96822289 96822499 + 6.36 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 161778 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr1-10181 chr1 110555453 110555663 + 6.36 0.000 Intergenic CpG -36383 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr11-10261 chr11 102389513 102389723 + 6.36 0.000 Intergenic MSTB|LTR|ERVL-MaLR 42244 NM_001256163 329 Hs.696238 NM_001166 ENSG00000110330 BIRC2 API1|HIAP2|Hiap-2|MIHB|RNF48|c-IAP1|cIAP1 baculoviral IAP repeat containing 2 protein-coding chr1-13337 chr1 245807839 245808049 + 6.36 0.000 intron (NM_022743, intron 10 of 11) intron (NM_022743, intron 10 of 11) -573427 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chrX-2353 chrX 65706458 65706668 + 6.36 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 38909 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr9-6003 chr9 135024114 135024324 + 6.36 0.000 Intergenic Intergenic -51286 NM_006334 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr3-8986 chr3 17399109 17399319 + 6.36 0.000 intron (NM_014744, intron 8 of 21) intron (NM_014744, intron 8 of 21) 300806 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr16-5631 chr16 63926239 63926449 + 6.36 0.000 Intergenic Intergenic 1195719 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chrX-1972 chrX 10287378 10287588 + 6.36 0.000 Intergenic Intergenic 130508 NM_001830 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chr10-5295 chr10 69838593 69838803 + 6.36 0.000 intron (NM_001368898, intron 3 of 33) intron (NM_001368898, intron 3 of 33) 36792 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr5-7765 chr5 61609389 61609599 + 6.36 0.000 Intergenic L1MC4|LINE|L1 -28266 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr10-5642 chr10 97059342 97059552 + 6.36 0.000 intron (NM_003061, intron 11 of 36) intron (NM_003061, intron 11 of 36) -43309 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr19-6808 chr19 41836891 41837101 + 6.36 0.000 TTS (NM_001291419) TTS (NM_001291419) 6731 NM_001291419 147719 Hs.98660 NM_173506 ENSG00000273111 LYPD4 SMR LY6/PLAUR domain containing 4 protein-coding chr17-7418 chr17 9991596 9991806 + 6.36 0.000 intron (NM_201432, intron 2 of 13) intron (NM_201432, intron 2 of 13) -32206 NM_003644 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr7-8122 chr7 26962835 26963045 + 6.36 0.000 Intergenic AluSg|SINE|Alu -98350 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr4-6096 chr4 10772906 10773116 + 6.36 0.000 Intergenic Intergenic -88243 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr7-5679 chr7 66152148 66152358 + 6.36 0.000 exon (NM_014478, exon 6 of 6) exon (NM_014478, exon 6 of 6) 37406 NM_014478 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr1-15781 chr1 175408153 175408363 + 6.36 0.000 intron (NM_003285, intron 2 of 22) intron (NM_003285, intron 2 of 22) -215271 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr4-7318 chr4 55034814 55035024 + 6.36 0.000 Intergenic Intergenic 90676 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr6-4857 chr6 87391368 87391578 + 6.36 0.000 Intergenic Intergenic -5651 NR_026784 63914 Hs.645177 NM_022084 ENSG00000111850 LINC01590 C6orf164|dJ102H19.4 long intergenic non-protein coding RNA 1590 ncRNA chr17-7754 chr17 34647731 34647941 + 6.36 0.000 Intergenic Intergenic 67087 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr17-7517 chr17 17380219 17380429 + 6.36 0.000 Intergenic Intergenic 76951 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr20-1195 chr20 5504245 5504455 + 6.36 0.000 non-coding (NR_015406, exon 1 of 2) non-coding (NR_015406, exon 1 of 2) 246 NR_015406 149837 Hs.123609 NR_015406 ENSG00000205181 LINC00654 - long intergenic non-protein coding RNA 654 ncRNA chr7-8926 chr7 95359138 95359348 + 6.36 0.000 TTS (NM_000940) TTS (NM_000940) -34711 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chrX-2327 chrX 56578205 56578415 + 6.36 0.000 Intergenic L1PA16|LINE|L1 14717 NM_013444 29978 Hs.179309 NM_013444 ENSG00000188021 UBQLN2 ALS15|CHAP1|DSK2|HRIHFB2157|N4BP4|PLIC2 ubiquilin 2 protein-coding chr17-7088 chr17 68046139 68046349 + 6.36 0.000 intron (NM_001320611, intron 10 of 10) intron (NM_001320611, intron 10 of 10) 10284 NM_001320611 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr12-4882 chr12 64007733 64007943 + 6.36 0.000 intron (NM_001346201, intron 3 of 21) intron (NM_001346201, intron 3 of 21) 163138 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr8-6213 chr8 37370916 37371126 + 6.36 0.000 Intergenic Intergenic 122892 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr9-8407 chr9 120105772 120105982 + 6.36 0.000 Intergenic Charlie15b|DNA|hAT-Charlie 139173 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr5-8030 chr5 90094183 90094393 + 6.36 0.000 Intergenic Intergenic -77568 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chrX-2889 chrX 148928927 148929137 + 6.36 0.000 intron (NM_001170628, intron 6 of 17) intron (NM_001170628, intron 6 of 17) 209941 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr8-6045 chr8 24292696 24292906 + 6.36 0.000 Intergenic MIR3|SINE|MIR -1239 NM_021777 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr20-4124 chr20 42303984 42304194 + 6.36 0.000 intron (NM_133170, intron 12 of 31) intron (NM_133170, intron 12 of 31) -381394 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr2-9053 chr2 200373194 200373404 + 6.36 0.000 intron (NM_001282743, intron 2 of 11) (A)n|Simple_repeat|Simple_repeat 64349 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr3-6776 chr3 142670488 142670698 + 6.36 0.000 intron (NM_001145319, intron 3 of 15) intron (NM_001145319, intron 3 of 15) 13696 NM_001172312 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr20-2618 chr20 40885891 40886101 + 6.36 0.000 Intergenic Intergenic -94717 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr18-1524 chr18 8556594 8556804 + 6.36 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -52746 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr19-4177 chr19 41710000 41710210 + 6.36 0.000 intron (NM_001308398, intron 2 of 8) intron (NM_001308398, intron 2 of 8) 1479 NM_001291484 1048 Hs.709196 NM_004363 ENSG00000105388 CEACAM5 CD66e|CEA carcinoembryonic antigen related cell adhesion molecule 5 protein-coding chr2-7425 chr2 10363657 10363867 + 6.36 0.000 intron (NM_001258357, intron 1 of 4) MIRc|SINE|MIR -4916 NM_001258358 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr6-5714 chr6 138546827 138547037 + 6.36 0.000 intron (NM_020464, intron 1 of 6) intron (NM_020464, intron 1 of 6) 25637 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr4-8513 chr4 162168992 162169202 + 6.36 0.000 Intergenic Intergenic -5063 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr14-3053 chr14 59959042 59959252 + 6.36 0.000 intron (NR_075071, intron 8 of 32) MER96B|DNA|hAT-Tip100 39434 NM_001355272 341883 Hs.666245 NM_198499 ENSG00000131951 LRRC9 - leucine rich repeat containing 9 protein-coding chr2-5818 chr2 232390755 232390965 + 6.36 0.000 Intergenic MER65-int|LTR|ERV1 -3816 NR_028501 347694 Hs.452575 NR_028501 ENSG00000244280 ECEL1P2 ECEL2 endothelin converting enzyme like 1 pseudogene 2 pseudo chr5-9088 chr5 172328741 172328951 + 6.36 0.000 intron (NM_001308175, intron 12 of 12) LTR79|LTR|ERVL 43249 NR_130933 100288254 Hs.531911 NM_001007542 LOC100288254 - uncharacterized LOC100288254 ncRNA chr3-5097 chr3 47969384 47969594 + 6.36 0.000 intron (NM_002375, intron 3 of 18) intron (NM_002375, intron 3 of 18) 119359 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr6-8243 chr6 137358355 137358565 + 6.36 0.000 Intergenic Intergenic 135934 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr19-5795 chr19 35039401 35039611 + 6.36 0.000 promoter-TSS (NM_182983) promoter-TSS (NM_182983) -1000 NM_182983 3249 Hs.182385 NM_002151 ENSG00000105707 HPN TMPRSS1 hepsin protein-coding chr2-11855 chr2 21299219 21299429 + 6.36 0.000 Intergenic Intergenic 175338 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr4-5031 chr4 140688784 140688994 + 6.36 0.000 intron (NM_015130, intron 2 of 20) intron (NM_015130, intron 2 of 20) -45809 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chrX-2585 chrX 104507924 104508134 + 6.36 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -58170 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr6-4739 chr6 68770306 68770516 + 6.36 0.000 intron (NM_001704, intron 3 of 31) intron (NM_001704, intron 3 of 31) 135129 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr8-6229 chr8 38355380 38355590 + 6.36 0.000 intron (NM_023034, intron 1 of 23) intron (NM_023034, intron 1 of 23) 26786 NM_023034 54904 Hs.434966 NM_017778 ENSG00000147548 NSD3 KMT3F|KMT3G|WHISTLE|WHSC1L1|pp14328 nuclear receptor binding SET domain protein 3 protein-coding chr17-8368 chr17 74523729 74523939 + 6.36 0.000 intron (NM_174892, intron 2 of 3) intron (NM_174892, intron 2 of 3) 7641 NM_174892 124599 Hs.313343 NM_174892 ENSG00000178789 CD300LB CD300b|CLM-7|CLM7|CMRF35-A2|IREM-3|IREM3|TREM-5|TREM5 CD300 molecule like family member b protein-coding chr6-6541 chr6 131731513 131731723 + 6.36 0.000 intron (NR_133007, intron 20 of 23) HAL1|LINE|L1 -20601 NM_001145659 643854 Hs.632613 NM_001145659 ENSG00000236761 CTAGE9 - CTAGE family member 9 protein-coding chr5-7183 chr5 6062180 6062390 + 6.36 0.000 Intergenic Intergenic 275007 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr3-4811 chr3 130106031 130106241 + 6.36 0.000 intron (NR_024252, intron 1 of 4) intron (NR_024252, intron 1 of 4) 5297 NR_024252 729375 Hs.123633 NR_024252 FAM86HP - family with sequence similarity 86, member A pseudogene pseudo chr2-7126 chr2 189531172 189531382 + 6.36 0.000 Intergenic Intergenic 49534 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr12-6700 chr12 4450370 4450580 + 6.36 0.000 Intergenic Intergenic -4861 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr2-12959 chr2 103062163 103062373 + 6.36 0.000 Intergenic L1PA7|LINE|L1 -77839 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr17-7716 chr17 32691650 32691860 + 6.36 0.000 intron (NM_015194, intron 16 of 21) L1ME4a|LINE|L1 185369 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr14-3431 chr14 98217558 98217768 + 6.36 0.000 Intergenic L2a|LINE|L2 -239539 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr11-7058 chr11 120187158 120187368 + 6.36 0.000 Intergenic Intergenic 18286 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chr1-8235 chr1 29524561 29524771 + 6.36 0.000 Intergenic (CCTC)n|Simple_repeat|Simple_repeat -174552 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr15-2354 chr15 38316539 38316749 + 6.36 0.000 intron (NM_152594, intron 2 of 6) intron (NM_152594, intron 2 of 6) 63808 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr20-3086 chr20 18092938 18093148 + 6.36 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -33855 NM_001303462 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr21-928 chr21 36272548 36272758 + 6.36 0.000 intron (NM_005128, intron 27 of 36) AluSx1|SINE|Alu -47536 NM_001320446 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr13-3081 chr13 45139965 45140175 + 6.36 0.000 intron (NM_004128, intron 2 of 7) AluJb|SINE|Alu 19560 NM_004128 2963 Hs.654582 NM_004128 ENSG00000188342 GTF2F2 BTF4|RAP30|TF2F2|TFIIF general transcription factor IIF subunit 2 protein-coding chr8-5776 chr8 142491421 142491631 + 6.36 0.000 intron (NM_001702, intron 17 of 30) intron (NM_001702, intron 17 of 30) 41877 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr17-6415 chr17 2822637 2822847 + 6.36 0.000 intron (NM_001330058, intron 2 of 24) L1PA4|LINE|L1 26304 NM_001100398 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr8-3676 chr8 16647522 16647732 + 6.36 0.000 Intergenic L1PA8|LINE|L1 354718 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr13-1806 chr13 36395476 36395686 + 6.36 0.000 Intergenic Intergenic -25401 NM_001142294 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding chrX-5072 chrX 124719149 124719359 + 6.36 0.000 intron (NM_014253, intron 4 of 30) intron (NM_014253, intron 4 of 30) 244563 NM_001163279 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr7-9547 chr7 140570557 140570767 + 6.36 0.000 intron (NM_001318052, intron 5 of 18) intron (NM_001318052, intron 5 of 18) 31880 NR_134477 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding chr3-9681 chr3 64109564 64109774 + 6.36 0.000 intron (NM_001370528, intron 7 of 7) intron (NM_001370528, intron 7 of 7) 6199 NR_046701 100874242 Hs.668874 NR_046701 PRICKLE2-AS2 - PRICKLE2 antisense RNA 2 ncRNA chr18-2911 chr18 12061524 12061734 + 6.36 0.000 Intergenic REP522|Satellite|telo -32214 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr9-8139 chr9 101676772 101676982 + 6.36 0.000 intron (NM_133445, intron 2 of 8) intron (NM_133445, intron 2 of 8) 61703 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr7-6884 chr7 65810739 65810949 + 6.36 0.000 Intergenic AluSx|SINE|Alu -40034 NR_038378 441242 Hs.373941 NM_001013464 ENSG00000272693 LOC441242 - uncharacterized LOC441242 ncRNA chr5-8217 chr5 108560820 108561030 + 6.36 0.000 Intergenic Intergenic 167336 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr1-16373 chr1 221359080 221359290 + 6.36 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -22889 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr8-3916 chr8 41672679 41672889 + 6.36 0.000 exon (NM_001142446, exon 39 of 43) exon (NM_001142446, exon 39 of 43) -7510 NM_020480 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr11-6741 chr11 82648260 82648470 + 6.36 0.000 Intergenic Intergenic 85499 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr3-7615 chr3 17125774 17125984 + 6.36 0.000 Intergenic Zaphod|DNA|hAT-Tip100 192683 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr14-4483 chr14 36254227 36254437 + 6.36 0.000 Intergenic LTR86A2|LTR|ERVL 66305 NM_001308110 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr1-16376 chr1 221810364 221810574 + 6.36 0.000 Intergenic Intergenic 30197 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr4-8021 chr4 118077401 118077611 + 6.36 0.000 intron (NM_004784, intron 2 of 13) L1PA15|LINE|L1 43020 NR_146514 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chr3-9464 chr3 49895856 49896066 + 6.36 0.000 exon (NM_002447, exon 11 of 20) exon (NM_002447, exon 11 of 20) 7676 NM_001318913 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chr5-8041 chr5 91207415 91207625 + 6.36 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 106882 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr16-6035 chr16 9971342 9971552 + 6.36 0.000 intron (NM_001134408, intron 2 of 13) MLT1H2|LTR|ERVL-MaLR 210620 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr13-3957 chr13 61485619 61485829 + 6.36 0.000 Intergenic L1PREC2|LINE|L1 -57778 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr10-6468 chr10 34429344 34429554 + 6.36 0.000 intron (NM_001184791, intron 4 of 20) AluJo|SINE|Alu 385847 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr8-4607 chr8 130984496 130984706 + 6.36 0.000 intron (NM_001115, intron 2 of 17) intron (NM_001115, intron 2 of 17) 56308 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr16-5258 chr16 50568186 50568396 + 6.36 0.000 intron (NM_033119, intron 3 of 9) intron (NM_033119, intron 3 of 9) 19895 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr4-6819 chr4 8015739 8015949 + 6.36 0.000 intron (NM_001130086, intron 11 of 17) intron (NM_001130086, intron 11 of 17) -10463 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr15-4742 chr15 68681730 68681940 + 6.36 0.000 intron (NM_006091, intron 2 of 11) intron (NM_006091, intron 2 of 11) 40332 NM_001324015 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr5-7812 chr5 66349063 66349273 + 6.36 0.000 Intergenic MIRc|SINE|MIR -139722 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA chr17-3650 chr17 6495357 6495567 + 6.36 0.000 intron (NM_031220, intron 4 of 19) intron (NM_031220, intron 4 of 19) 51007 NM_001195228 54478 Hs.592116 NM_019013 ENSG00000129195 PIMREG CATS|FAM64A|RCS1 PICALM interacting mitotic regulator protein-coding chr3-8692 chr3 185356785 185356995 + 6.36 0.000 intron (NM_001242317, intron 2 of 12) (ATGT)n|Simple_repeat|Simple_repeat -6246 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr21-1664 chr21 26367803 26368013 + 6.36 0.000 Intergenic Intergenic -25727 NR_135516 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chrX-1607 chrX 103607924 103608134 + 6.36 0.000 promoter-TSS (NM_032926) promoter-TSS (NM_032926) 66 NM_032926 85012 Hs.311776 NM_032926 ENSG00000196507 TCEAL3 WEX8 transcription elongation factor A like 3 protein-coding chr19-4166 chr19 39305658 39305868 + 6.36 0.000 Intergenic MIR|SINE|MIR 9356 NM_172140 282618 Hs.406745 NM_172140 ENSG00000182393 IFNL1 IL-29|IL29 interferon lambda 1 protein-coding chr2-13575 chr2 156315001 156315211 + 6.36 0.000 Intergenic Intergenic 17615 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr9-8377 chr9 118259997 118260207 + 6.36 0.000 Intergenic L1PA8|LINE|L1 -419569 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr3-6305 chr3 75614419 75614629 + 6.36 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -16239 NR_031714 100302212 NR_031714 ENSG00000283894 MIR1324 MIRN1324|hsa-mir-1324 microRNA 1324 ncRNA chr1-15694 chr1 168485133 168485343 + 6.36 0.000 intron (NR_125956, intron 4 of 4) L1PA8|LINE|L1 10406 NR_125956 101928565 Hs.563806 NR_125956 ENSG00000228697 LOC101928565 - uncharacterized LOC101928565 ncRNA chr2-5861 chr2 239163500 239163710 + 6.36 0.000 intron (NM_006037, intron 6 of 26) intron (NM_006037, intron 6 of 26) 31852 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr5-7513 chr5 36177837 36178047 + 6.36 0.000 intron (NM_032637, intron 9 of 9) intron (NM_032637, intron 9 of 9) 25831 NM_032637 6502 Hs.23348 NM_005983 ENSG00000145604 SKP2 FBL1|FBXL1|FLB1|p45 S-phase kinase associated protein 2 protein-coding chr4-4714 chr4 89255044 89255254 + 6.36 0.000 intron (NM_198281, intron 1 of 1) MIR|SINE|MIR 52651 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr13-2991 chr13 97369459 97369669 + 6.36 0.000 intron (NM_144778, intron 8 of 8) intron (NM_144778, intron 8 of 8) -64605 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr1-15991 chr1 196461777 196461987 + 6.36 0.000 intron (NM_001287820, intron 8 of 26) intron (NM_001287820, intron 8 of 26) 120599 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chr2-7306 chr2 240195420 240195630 + 6.36 0.000 Intergenic LTR16A1|LTR|ERVL -54867 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr2-3819 chr2 25831192 25831402 + 6.36 0.000 promoter-TSS (NM_001369346) promoter-TSS (NM_001369346) -396 NM_001369346 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr7-9055 chr7 103751688 103751898 + 6.36 0.000 intron (NM_005045, intron 5 of 64) intron (NM_005045, intron 5 of 64) 237723 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr1-11206 chr1 244027372 244027582 + 6.36 0.000 intron (NR_033883, intron 8 of 11) intron (NR_033883, intron 8 of 11) -21462 NM_001278196 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr2-13573 chr2 156127011 156127221 + 6.36 0.000 intron (NR_110250, intron 1 of 3) THE1B|LTR|ERVL-MaLR 127815 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr8-6882 chr8 100914635 100914845 + 6.36 0.000 Intergenic Intergenic 35831 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr17-7352 chr17 6674779 6674989 + 6.36 0.000 Intergenic Intergenic 17165 NR_045985 100652883 Hs.549540 NR_045985 ALOX15P1 ALOX15P arachidonate 15-lipoxygenase pseudogene 1 pseudo chr8-7351 chr8 135599709 135599919 + 6.36 0.000 intron (NM_006558, intron 6 of 8) L2c|LINE|L2 142358 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr16-4214 chr16 12688144 12688354 + 6.36 0.000 intron (NM_001099455, intron 2 of 2) intron (NM_001099455, intron 2 of 2) -32072 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr17-2784 chr17 3719301 3719511 + 6.36 0.000 intron (NM_002208, intron 29 of 30) intron (NM_002208, intron 29 of 30) -4497 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr17-5904 chr17 73760063 73760273 + 6.36 0.000 intron (NR_027146, intron 3 of 3) intron (NR_027146, intron 3 of 3) 22314 NM_001278587 100134391 Hs.694655 NM_001278587 LOC100134391 - uncharacterized LOC100134391 protein-coding chr1-9765 chr1 55046352 55046562 + 6.36 0.000 intron (NM_174936, intron 2 of 11) intron (NM_174936, intron 2 of 11) 6235 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr2-8215 chr2 95830000 95830210 + 6.36 0.000 Intergenic L1PA12|LINE|L1 -3124 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr5-5488 chr5 140576367 140576577 + 6.36 0.000 Intergenic L1MB5|LINE|L1 -11868 NM_133174 10307 Hs.529449 NM_006051 ENSG00000113108 APBB3 FE65L2|SRA amyloid beta precursor protein binding family B member 3 protein-coding chr9-4917 chr9 10539530 10539740 + 6.36 0.000 intron (NM_002839, intron 2 of 45) LTR52|LTR|ERVL 73367 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr1-15492 chr1 155782285 155782495 + 6.36 0.000 intron (NM_032292, intron 14 of 20) Tigger3a|DNA|TcMar-Tigger 1442 NR_132767 106633816 NR_132767 SCARNA26B - small Cajal body-specific RNA 26B ncRNA chrX-2846 chrX 139660114 139660324 + 6.36 0.000 intron (NM_001099855, intron 1 of 27) intron (NM_001099855, intron 1 of 27) -17316 NM_005369 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr9-5236 chr9 77111478 77111688 + 6.36 0.000 Intergenic LTR48|LTR|ERV1 -65862 NM_001018038 23230 Hs.459790 NM_015186 ENSG00000197969 VPS13A CHAC|CHOREIN vacuolar protein sorting 13 homolog A protein-coding chr16-6004 chr16 8078835 8079045 + 6.36 0.000 Intergenic MSTA|LTR|ERVL-MaLR 510898 NM_001290095 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr12-5965 chr12 87403289 87403499 + 6.36 0.000 Intergenic AluSc|SINE|Alu 72655 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr12-5144 chr12 100155712 100155922 + 6.36 0.000 TTS (NR_036632) TTS (NR_036632) -12943 NM_001006947 23074 Hs.572154 NM_015054 ENSG00000111647 UHRF1BP1L SHIP164 UHRF1 binding protein 1 like protein-coding chr1-13081 chr1 180961191 180961401 + 6.36 0.000 Intergenic MER5A|DNA|hAT-Charlie -6409 NR_145481 103344928 Hs.665319 NR_145481 ENSG00000232586 KIAA1614-AS1 - KIAA1614 antisense RNA 1 ncRNA chr13-4252 chr13 97122488 97122698 + 6.36 0.000 Intergenic Intergenic 57029 NR_125725 103625683 Hs.679591 NR_125725 ENSG00000233124 LINC00456 - long intergenic non-protein coding RNA 456 ncRNA chr12-7837 chr12 101614143 101614353 + 6.36 0.000 intron (NM_001254722, intron 1 of 27) intron (NM_001254722, intron 1 of 27) 19277 NM_002465 4604 Hs.654589 NM_002465 ENSG00000196091 MYBPC1 LCCS4|MYBPCC|MYBPCS myosin binding protein C, slow type protein-coding chr10-4319 chr10 22025038 22025248 + 6.36 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -21413 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr9-5538 chr9 108643819 108644029 + 6.36 0.000 Intergenic Intergenic 212062 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr17-5218 chr17 16768003 16768213 + 6.36 0.000 intron (NM_014695, intron 15 of 17) PABL_A|LTR|ERV1 -18784 NR_003190 162632 Hs.419859 NR_003190 ENSG00000188933 USP32P1 - ubiquitin specific peptidase 32 pseudogene 1 pseudo chr7-7983 chr7 15409102 15409312 + 6.36 0.000 intron (NM_001004320, intron 5 of 12) intron (NM_001004320, intron 5 of 12) 152808 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chr4-6674 chr4 2640708 2640918 + 6.36 0.000 intron (NM_001256668, intron 4 of 19) AluSx|SINE|Alu 15381 NM_003704 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr1-5618 chr1 18806177 18806387 + 6.36 0.000 Intergenic Intergenic 53379 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr19-4950 chr19 44951554 44951764 + 6.36 0.000 Intergenic MSR1|Satellite|Satellite -2926 NM_001282176 1209 Hs.444441 NM_001294 ENSG00000104853 CLPTM1 - CLPTM1 regulator of GABA type A receptor forward trafficking protein-coding chr5-7859 chr5 72633738 72633948 + 6.36 0.000 intron (NR_105007, intron 1 of 2) intron (NR_105007, intron 1 of 2) 26826 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr4-4750 chr4 95939226 95939436 + 6.36 0.000 Intergenic MER5B|DNA|hAT-Charlie 99238 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding chr10-6351 chr10 125477587 125477797 + 6.36 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -96679 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr6-6359 chr6 62047483 62047693 + 6.36 0.000 intron (NR_146874, intron 3 of 13) intron (NR_146874, intron 3 of 13) 238637 NR_146874 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr13-2698 chr13 90968627 90968837 + 6.36 0.000 Intergenic Intergenic -42135 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr11-5942 chr11 16415527 16415737 + 6.36 0.000 intron (NM_001367872, intron 3 of 16) L1MA5|LINE|L1 -6776 NM_001145811 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr1-16561 chr1 234308128 234308338 + 6.36 0.000 intron (NM_173508, intron 3 of 7) intron (NM_173508, intron 3 of 7) 1766 NR_039818 100616380 NR_039818 ENSG00000264377 MIR4671 - microRNA 4671 ncRNA chr10-6737 chr10 129532312 129532522 + 6.36 0.000 intron (NM_002412, intron 1 of 4) intron (NM_002412, intron 1 of 4) 65176 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chrX-4054 chrX 18889991 18890201 + 6.36 0.000 promoter-TSS (NR_029379) promoter-TSS (NR_029379) -200 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr3-9615 chr3 57584374 57584584 + 6.36 0.000 intron (NM_001660, intron 1 of 5) intron (NM_001660, intron 1 of 5) 12865 NM_001660 378 Hs.652183 NM_001660 ENSG00000168374 ARF4 ARF2 ADP ribosylation factor 4 protein-coding chr5-3826 chr5 102297001 102297211 + 6.36 0.000 promoter-TSS (NM_180991) promoter-TSS (NM_180991) -822 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr11-9998 chr11 79373953 79374163 + 6.36 0.000 intron (NM_001098816, intron 1 of 33) intron (NM_001098816, intron 1 of 33) 28051 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr2-7933 chr2 60277795 60278005 + 6.36 0.000 Intergenic Intergenic 105136 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr3-10515 chr3 137656802 137657012 + 6.36 0.000 Intergenic L1PA7|LINE|L1 -107408 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding chr6-5418 chr6 156379146 156379356 + 6.36 0.000 TTS (NR_145751) TTS (NR_145751) 501 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr6-7496 chr6 63270089 63270299 + 6.36 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 49783 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr12-3195 chr12 52912543 52912753 + 6.36 0.000 intron (NM_001256293, intron 1 of 8) intron (NM_001256293, intron 1 of 8) -7572 NM_002273 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr5-7808 chr5 66134778 66134988 + 6.36 0.000 Intergenic L1ME1|LINE|L1 -9417 NM_001077199 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding chr11-9291 chr11 45158476 45158686 + 6.36 0.000 intron (NM_001256695, intron 1 of 7) intron (NM_001256695, intron 1 of 7) 11238 NM_001256696 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chrX-1834 chrX 103769204 103769414 + 6.36 0.000 Intergenic Intergenic -7197 NM_001128834 5354 Hs.1787 NM_000533 ENSG00000123560 PLP1 GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2 proteolipid protein 1 protein-coding chr14-3237 chr14 75709293 75709503 + 6.36 0.000 intron (NM_015072, intron 9 of 31) intron (NM_015072, intron 9 of 31) 48152 NM_015072 23093 Hs.709609 NM_015072 ENSG00000119685 TTLL5 CORD19|KIAA0998|STAMP tubulin tyrosine ligase like 5 protein-coding chr22-3636 chr22 21916341 21916551 + 6.36 0.000 Intergenic Intergenic -21791 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr3-5502 chr3 194942373 194942583 + 6.36 0.000 Intergenic MER21C|LTR|ERVL -152110 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr7-5351 chr7 30126596 30126806 + 6.36 0.000 intron (NM_001350973, intron 13 of 13) THE1B|LTR|ERVL-MaLR -8285 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr14-3245 chr14 76401557 76401767 + 6.36 0.000 intron (NM_004452, intron 1 of 10) Tigger3a|DNA|TcMar-Tigger 30315 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr20-4336 chr20 53737705 53737915 + 6.36 0.000 Intergenic Intergenic 129456 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr4-7706 chr4 89204142 89204352 + 6.36 0.000 Intergenic Intergenic 91430 NM_145715 166815 Hs.58924 NM_145715 ENSG00000180346 TIGD2 HEL106 tigger transposable element derived 2 protein-coding chr20-4431 chr20 61123868 61124078 + 6.36 0.000 Intergenic Intergenic 44909 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LINC01718 - long intergenic non-protein coding RNA 1718 ncRNA chr12-2801 chr12 104626395 104626605 + 6.36 0.000 intron (NM_018413, intron 2 of 2) MIRc|SINE|MIR 34867 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr20-3491 chr20 62013296 62013506 + 6.36 0.000 intron (NM_003185, intron 2 of 14) intron (NM_003185, intron 2 of 14) -51401 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr1-10725 chr1 195954750 195954960 + 6.36 0.000 Intergenic LTR1D1|LTR|ERV1 133860 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr10-7968 chr10 58111691 58111901 + 6.36 0.000 Intergenic MIR|SINE|MIR 156098 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr14-3336 chr14 89239851 89240061 + 6.36 0.000 intron (NM_001085471, intron 4 of 6) intron (NM_001085471, intron 4 of 6) 177277 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr7-9517 chr7 139075062 139075272 + 6.36 0.000 intron (NM_020119, intron 6 of 12) MER20|DNA|hAT-Charlie -31010 NR_162108 113218503 NR_162108 MIR10399 - microRNA 10399 ncRNA chrX-4242 chrX 39049353 39049563 + 6.36 0.000 Intergenic LTR16C|LTR|ERVL -245575 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr12-6649 chr12 648016 648226 + 6.36 0.000 intron (NM_016533, intron 1 of 3) AluSq2|SINE|Alu -4485 NM_001367996 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chr5-7954 chr5 80712063 80712273 + 6.36 0.000 intron (NM_002439, intron 8 of 23) intron (NM_002439, intron 8 of 23) -57185 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr6-8607 chr6 168099953 168100163 + 6.36 0.000 Intergenic Intergenic -18501 NR_110312 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr18-3151 chr18 41253879 41254089 + 6.36 0.000 Intergenic Intergenic 266693 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr3-9860 chr3 80130193 80130403 + 6.36 0.000 Intergenic L1MA1|LINE|L1 -362300 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chrX-4416 chrX 53493366 53493576 + 6.36 0.000 Intergenic Intergenic -59095 NM_004493 3028 Hs.171280 NM_004493 ENSG00000072506 HSD17B10 17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|HSD10MD|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1 hydroxysteroid 17-beta dehydrogenase 10 protein-coding chr8-6844 chr8 98621410 98621620 + 6.36 0.000 intron (NM_001256313, intron 4 of 8) L1MD|LINE|L1 194557 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr15-3741 chr15 59535347 59535557 + 6.36 0.000 Intergenic Intergenic -76331 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr7-5830 chr7 85185341 85185551 + 6.36 0.000 Intergenic Intergenic -63515 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr7-5178 chr7 7386602 7386812 + 6.36 0.000 intron (NM_001037763, intron 27 of 34) L1MCc|LINE|L1 131553 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr6-7935 chr6 110728868 110729078 + 6.36 0.000 intron (NM_001300963, intron 3 of 13) L2c|LINE|L2 -85648 NM_001287215 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr12-7866 chr12 105137245 105137455 + 6.36 0.000 intron (NM_001293640, intron 14 of 32) intron (NM_001293640, intron 14 of 32) 29619 NM_001293640 23325 Hs.12144 NM_015275 ENSG00000136051 WASHC4 KIAA1033|MRT43|SWIP WASH complex subunit 4 protein-coding chr22-2235 chr22 24764680 24764890 + 6.36 0.000 non-coding (NR_001283, exon 1 of 1) non-coding (NR_001283, exon 1 of 1) 284 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo chr12-6833 chr12 13588346 13588556 + 6.36 0.000 intron (NM_000834, intron 9 of 12) intron (NM_000834, intron 9 of 12) -211706 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr7-9278 chr7 124993559 124993769 + 6.36 0.000 intron (NR_125719, intron 2 of 7) MSTB1|LTR|ERVL-MaLR -63681 NR_003103 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr13-2864 chr13 110456024 110456234 + 6.36 0.000 TTS (NM_001267044) TTS (NM_001267044) 7158 NM_001267044 100129836 Hs.640035 NM_001267044 COL4A2-AS2 - COL4A2 antisense 2 protein-coding chr2-14190 chr2 207305901 207306111 + 6.36 0.000 Intergenic MIRb|SINE|MIR -36582 NR_031633 100302130 NR_031633 ENSG00000221628 MIR1302-4 MIRN1302-4|hsa-mir-1302-4 microRNA 1302-4 ncRNA chr6-6902 chr6 12928779 12928989 + 6.36 0.000 intron (NM_001322308, intron 3 of 13) intron (NM_001322308, intron 3 of 13) -28472 NM_001322311 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr3-5988 chr3 48173553 48173763 + 6.36 0.000 intron (NM_201567, intron 8 of 13) L1MDa|LINE|L1 14759 NM_201567 993 Hs.437705 NM_001789 ENSG00000164045 CDC25A CDC25A2 cell division cycle 25A protein-coding chr9-7399 chr9 19985343 19985553 + 6.36 0.000 Intergenic L1ME1|LINE|L1 -198429 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr3-5571 chr3 5799443 5799653 + 6.36 0.000 Intergenic Intergenic -549293 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr1-12677 chr1 46961204 46961414 + 6.36 0.000 promoter-TSS (NM_001320289) promoter-TSS (NM_001320289) -55 NM_001320289 260293 Hs.439760 NM_178033 ENSG00000186377 CYP4X1 CYPIVX1 cytochrome P450 family 4 subfamily X member 1 protein-coding chr5-7030 chr5 160570625 160570835 + 6.36 0.000 intron (NM_001366652, intron 23 of 24) L1MEd|LINE|L1 85378 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr8-5400 chr8 27183213 27183423 + 6.36 0.000 Intergenic MER57E1|LTR|ERV1 75086 NM_001283054 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding chr7-3733 chr7 67922730 67922940 + 6.36 0.000 Intergenic Intergenic -97418 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr1-14872 chr1 80793445 80793655 + 6.36 0.000 Intergenic Intergenic 152263 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chrX-2511 chrX 94912940 94913150 + 6.36 0.000 Intergenic Intergenic 150181 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr6-6781 chr6 3883730 3883940 + 6.36 0.000 Intergenic Intergenic 34462 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr9-6988 chr9 111509206 111509416 + 6.36 0.000 Intergenic Intergenic -15868 NM_001007169 158399 Hs.584864 NM_133464 ENSG00000173258 ZNF483 ZKSCAN16|ZSCAN48 zinc finger protein 483 protein-coding chr7-4907 chr7 129098676 129098886 + 6.36 0.000 Intergenic Intergenic -27490 NR_002144 407835 Hs.592273 NR_002144 LOC407835 - mitogen-activated protein kinase kinase 2 pseudogene pseudo chr20-4416 chr20 59601911 59602121 + 6.36 0.000 intron (NM_001199505, intron 1 of 12) MER113|DNA|hAT-Charlie -2524 NM_080672 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr4-5119 chr4 150501030 150501240 + 6.36 0.000 intron (NM_001367550, intron 40 of 56) intron (NM_001367550, intron 40 of 56) -77954 NR_149035 729558 Hs.647978 NR_149035 ENSG00000249690 LOC729558 - uncharacterized LOC729558 ncRNA chrX-4773 chrX 96728390 96728600 + 6.36 0.000 intron (NM_007309, intron 1 of 26) AluSx1|SINE|Alu 43653 NM_006729 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr2-14737 chr2 239126524 239126734 + 6.36 0.000 exon (NM_006037, exon 12 of 27) exon (NM_006037, exon 12 of 27) -40703 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr6-3212 chr6 135995444 135995654 + 6.36 0.000 intron (NM_018945, intron 2 of 12) intron (NM_018945, intron 2 of 12) 77278 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr16-6679 chr16 69891755 69891965 + 6.36 0.000 intron (NM_001270453, intron 5 of 20) intron (NM_001270453, intron 5 of 20) -33179 NM_199424 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr1-15627 chr1 162492872 162493082 + 6.36 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -4197 NM_001184763 127933 Hs.127310 NM_144624 ENSG00000152332 UHMK1 KIS|KIST|P-CIP2 U2AF homology motif kinase 1 protein-coding chr1-12475 chr1 18649739 18649949 + 6.36 0.000 intron (NM_001135254, intron 4 of 8) MIR3|SINE|MIR 18998 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr20-4038 chr20 37100822 37101032 + 6.36 0.000 TTS (NM_152503) TTS (NM_152503) -4930 NM_001323281 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr9-6788 chr9 32267658 32267868 + 6.36 0.000 Intergenic Intergenic -116840 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr4-7308 chr4 54328512 54328722 + 6.36 0.000 Intergenic Intergenic -4275 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr13-1986 chr13 24573548 24573758 + 6.36 0.000 Intergenic AluJb|SINE|Alu -6555 NR_002815 374491 Hs.406779 NR_002815 TPTE2P6 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6 pseudo chrX-3746 chrX 124560584 124560794 + 6.36 0.000 intron (NM_014253, intron 14 of 30) intron (NM_014253, intron 14 of 30) 214407 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr7-9578 chr7 146820627 146820837 + 6.36 0.000 intron (NM_014141, intron 1 of 22) L1P1|LINE|L1 46461 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr6-4500 chr6 37279923 37280133 + 6.36 0.000 intron (NR_130108, intron 3 of 12) intron (NR_130108, intron 3 of 12) -21873 NM_001286401 221468 Hs.520101 NM_145316 ENSG00000172738 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding chr5-4488 chr5 9653925 9654135 + 6.36 0.000 intron (NR_027112, intron 11 of 12) intron (NR_027112, intron 11 of 12) -23679 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr3-5190 chr3 70366330 70366540 + 6.36 0.000 Intergenic L1MC3|LINE|L1 -53797 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr17-6095 chr17 80940689 80940899 + 6.36 0.000 intron (NM_020761, intron 25 of 33) intron (NM_020761, intron 25 of 33) 30419 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr22-3749 chr22 26773164 26773374 + 6.36 0.000 intron (NR_110543, intron 2 of 5) SVA_F|Retroposon|SVA -86942 NR_146604 110091768 Hs.639900 NR_146604 LOC110091768 - uncharacterized LOC110091768 ncRNA chr1-13882 chr1 21661939 21662149 + 6.36 0.000 intron (NM_002885, intron 1 of 24) intron (NM_002885, intron 1 of 24) 7313 NM_001350525 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr1-14577 chr1 53447580 53447790 + 6.36 0.000 Intergenic MER57B2|LTR|ERV1 -7665 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr12-7089 chr12 44251799 44252009 + 6.36 0.000 intron (NM_001286213, intron 4 of 6) intron (NM_001286213, intron 4 of 6) 415823 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr2-9656 chr2 26145276 26145486 + 6.36 0.000 Intergenic HAL1|LINE|L1 -27707 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr3-5987 chr3 47961035 47961245 + 6.36 0.000 intron (NM_002375, intron 3 of 18) intron (NM_002375, intron 3 of 18) 111585 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr16-6139 chr16 20607104 20607314 + 6.36 0.000 Intergenic Intergenic -30842 NM_001105069 348158 Hs.298252 NM_182617 ENSG00000066813 ACSM2B ACSM2|HXMA|HYST1046 acyl-CoA synthetase medium chain family member 2B protein-coding chr5-6532 chr5 8067668 8067878 + 6.36 0.000 Intergenic L2a|LINE|L2 198625 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr11-10330 chr11 109718461 109718671 + 6.36 0.000 Intergenic THE1B|LTR|ERVL-MaLR 296376 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr11-8650 chr11 3193106 3193316 + 6.36 0.000 Intergenic Intergenic -25121 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr1-15076 chr1 96857738 96857948 + 6.36 0.000 Intergenic L1PA3|LINE|L1 135205 NR_125356 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr1-12110 chr1 160584756 160584966 + 6.36 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -5345 NM_001184882 8832 Hs.398093 NM_003874 ENSG00000066294 CD84 LY9B|SLAMF5|hCD84|mCD84 CD84 molecule protein-coding chr20-4330 chr20 53286667 53286877 + 6.36 0.000 intron (NM_173485, intron 2 of 2) AluJo|SINE|Alu 101489 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr7-1996 chr7 6969122 6969332 + 6.36 0.000 Intergenic Intergenic 97818 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr6-7121 chr6 35344050 35344260 + 6.36 0.000 intron (NM_177435, intron 1 of 6) intron (NM_177435, intron 1 of 6) 1597 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr8-4604 chr8 130720669 130720879 + 6.36 0.000 Intergenic Intergenic -277100 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr9-7840 chr9 83601552 83601762 + 6.36 0.000 Intergenic L2a|LINE|L2 -21392 NM_001256915 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding chr1-12125 chr1 166481128 166481338 + 6.36 0.000 intron (NR_146890, intron 1 of 2) intron (NR_146890, intron 1 of 2) 8806 NR_146890 105371590 Hs.575926 NR_146890 ENSG00000234142 LINC01675 - long intergenic non-protein coding RNA 1675 ncRNA chr14-3796 chr14 63471144 63471354 + 6.36 0.000 intron (NM_001354926, intron 2 of 2) intron (NM_001354926, intron 2 of 2) 36989 NM_001282181 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr4-1432 chr4 75611517 75611727 + 6.36 0.000 intron (NM_003948, intron 3 of 11) intron (NM_003948, intron 3 of 11) 18906 NM_001330724 8999 Hs.591698 NM_003948 ENSG00000138769 CDKL2 KKIAMRE|P56 cyclin dependent kinase like 2 protein-coding chr3-8490 chr3 127606159 127606369 + 6.36 0.000 exon (NM_004526, exon 5 of 16) exon (NM_004526, exon 5 of 16) 7853 NR_073375 4171 Hs.477481 NM_004526 ENSG00000073111 MCM2 BM28|CCNL1|CDCL1|D3S3194|DFNA70|MITOTIN|cdc19 minichromosome maintenance complex component 2 protein-coding chr1-15543 chr1 157690019 157690229 + 6.36 0.000 intron (NM_052939, intron 9 of 14) intron (NM_052939, intron 9 of 14) 10645 NR_135217 115352 Hs.292449 NM_052939 ENSG00000160856 FCRL3 CD307c|FCRH3|IFGP3|IRTA3|SPAP2 Fc receptor like 3 protein-coding chr2-4830 chr2 65261818 65262028 + 6.36 0.000 intron (NM_001005386, intron 8 of 9) L1M2|LINE|L1 34228 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chrX-1492 chrX 148895626 148895836 + 6.36 0.000 intron (NM_001170628, intron 5 of 17) intron (NM_001170628, intron 5 of 17) 176640 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr5-4910 chr5 72402533 72402743 + 6.36 0.000 Intergenic Intergenic 82265 NM_001284403 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr10-3340 chr10 13074830 13075040 + 6.36 0.000 intron (NM_001282658, intron 3 of 6) intron (NM_001282658, intron 3 of 6) 25054 NM_001282658 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr17-6936 chr17 42489768 42489978 + 6.36 0.000 intron (NM_005177, intron 10 of 20) intron (NM_005177, intron 10 of 20) -4900 NR_049845 100847030 NR_049845 ENSG00000264314 MIR548AT - microRNA 548at ncRNA chr22-2065 chr22 47079079 47079289 + 6.36 0.000 intron (NM_001284305, intron 11 of 12) AluSx1|SINE|Alu -163142 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr9-4543 chr9 79028497 79028707 + 6.36 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 117064 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr13-3810 chr13 46317153 46317363 + 6.36 0.000 Intergenic Intergenic -19414 NR_047493 100861554 Hs.90866 NR_047493 ENSG00000261097 LINC00563 - long intergenic non-protein coding RNA 563 ncRNA chr9-7811 chr9 81031991 81032201 + 6.36 0.000 Intergenic Intergenic 657439 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr8-5649 chr8 109533628 109533838 + 6.36 0.000 3' UTR (NM_177531, exon 78 of 78) 3' UTR (NM_177531, exon 78 of 78) -5967 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding chr20-3652 chr20 9945479 9945689 + 6.36 0.000 Intergenic MER57A-int|LTR|ERV1 -40749 NR_109861 101929371 Hs.619265 NR_109861 PARAL1 - PPARG activating RBM14 associated lncRNA 1 ncRNA chr21-998 chr21 14770377 14770587 + 6.36 0.000 Intergenic MER5A|DNA|hAT-Charlie -127375 NM_001256579 388813 Hs.334177 NM_001256579 LOC388813 - uncharacterized protein ENSP00000383407-like protein-coding chr18-2553 chr18 3117499 3117709 + 6.36 0.000 intron (NM_019856, intron 19 of 36) intron (NM_019856, intron 19 of 36) 102364 NM_019856 8736 Hs.464469 NM_003803 ENSG00000101605 MYOM1 SKELEMIN myomesin 1 protein-coding chr12-3867 chr12 110307176 110307386 + 6.36 0.000 intron (NM_170665, intron 5 of 19) AluJb|SINE|Alu 26034 NM_170665 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr10-3321 chr10 4212725 4212935 + 6.36 0.000 intron (NR_108040, intron 2 of 2) intron (NR_108040, intron 2 of 2) 31082 NR_108040 100652988 Hs.433011 NR_108040 LINC00702 - long intergenic non-protein coding RNA 702 ncRNA chr9-5916 chr9 133044817 133045027 + 6.36 0.000 intron (NM_012087, intron 3 of 10) intron (NM_012087, intron 3 of 10) -7074 NR_106937 102465528 NR_106937 ENSG00000273932 MIR6877 hsa-mir-6877 microRNA 6877 ncRNA chr1-12504 chr1 21433553 21433763 + 6.36 0.000 Intergenic L1ME4b|LINE|L1 -6479 NR_046176 84224 Hs.325422 NM_032264 ENSG00000142794 NBPF3 AE2 NBPF member 3 protein-coding chr1-16223 chr1 209168542 209168752 + 6.36 0.000 Intergenic MER77B|LTR|ERVL -156809 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr6-5224 chr6 134525125 134525335 + 6.36 0.000 TTS (NR_125855) TTS (NR_125855) 14775 NR_125855 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr1-15934 chr1 186925938 186926148 + 6.36 0.000 intron (NM_024420, intron 7 of 17) intron (NM_024420, intron 7 of 17) 97094 NM_001311193 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr14-5169 chr14 91871835 91872045 + 6.36 0.000 intron (NM_006329, intron 10 of 10) MER5A1|DNA|hAT-Charlie -4404 NM_001128596 123036 Hs.510262 NM_152332 ENSG00000165929 TC2N C14orf47|C2CD1|MTAC2D1|Tac2-N tandem C2 domains, nuclear protein-coding chr2-11350 chr2 204142253 204142463 + 6.36 0.000 Intergenic L2b|LINE|L2 205610 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr21-1790 chr21 38191802 38192012 + 6.36 0.000 Intergenic Intergenic -14249 NR_027695 259234 Hs.147695 NM_148676 ENSG00000233316 DSCR10 - Down syndrome critical region 10 ncRNA chr3-9790 chr3 72127926 72128136 + 6.36 0.000 Intergenic Intergenic -23226 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr16-5955 chr16 4151481 4151691 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -35144 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr13-3466 chr13 112573798 112574008 + 6.36 0.000 intron (NM_006322, intron 1 of 21) intron (NM_006322, intron 1 of 21) 14250 NM_006322 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr13-4134 chr13 82748078 82748288 + 6.36 0.000 Intergenic Intergenic 1134210 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr18-1644 chr18 57621301 57621511 + 6.36 0.000 intron (NM_004539, intron 1 of 13) intron (NM_004539, intron 1 of 13) 430 NM_004539 4677 Hs.465224 NM_004539 ENSG00000134440 NARS ASNRS|NARS1 asparaginyl-tRNA synthetase protein-coding chr1-12214 chr1 205397527 205397737 + 6.36 0.000 intron (NR_037583, intron 2 of 3) intron (NR_037583, intron 2 of 3) 24380 NR_038425 284576 Hs.585440 NR_038425 ENSG00000226235 LEMD1-AS1 - LEMD1 antisense RNA 1 ncRNA chr13-2031 chr13 45824755 45824965 + 6.36 0.000 intron (NM_198849, intron 1 of 1) AluSz6|SINE|Alu 26893 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr1-11407 chr1 53929103 53929313 + 6.36 0.000 intron (NM_016126, intron 3 of 5) LTR33|LTR|ERVL 16615 NM_016126 51668 Hs.525462 NM_016126 ENSG00000081870 HSPB11 C1orf41|HSPCO34|IFT25|PP25 heat shock protein family B (small) member 11 protein-coding chr7-6671 chr7 147142513 147142723 + 6.36 0.000 intron (NM_014141, intron 7 of 22) L1P1|LINE|L1 -45009 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr11-8561 chr11 134285662 134285872 + 6.36 0.000 intron (NM_001080407, intron 6 of 19) AluJo|SINE|Alu 9388 NM_001080407 112937 Hs.721382 NM_138416 ENSG00000166105 GLB1L3 - galactosidase beta 1 like 3 protein-coding chr17-5536 chr17 43745695 43745905 + 6.36 0.000 Intergenic Intergenic 12991 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr10-5548 chr10 86779111 86779321 + 6.36 0.000 intron (NM_004329, intron 1 of 12) L1MA5A|LINE|L1 22577 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr1-8383 chr1 73527167 73527377 + 6.36 0.000 Intergenic LTR1A2|LTR|ERV1 -147407 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA chr14-1482 chr14 30270848 30271058 + 6.36 0.000 Intergenic Intergenic -288170 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding chr2-12554 chr2 68423962 68424172 + 6.36 0.000 Intergenic L2|LINE|L2 43227 NM_001024680 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding chr2-11314 chr2 197480702 197480912 + 6.36 0.000 Intergenic Intergenic 6096 NR_132787 106635539 NR_132787 SNORA105A - small nucleolar RNA, H/ACA box 105A snoRNA chr12-6774 chr12 8507167 8507377 + 6.36 0.000 Intergenic L1PREC2|LINE|L1 -6231 NM_080387 338339 Hs.351811 NM_080387 ENSG00000166527 CLEC4D CD368|CLEC-6|CLEC6|CLECSF8|Dectin-3|MCL|MPCL C-type lectin domain family 4 member D protein-coding chr13-1911 chr13 52080049 52080259 + 6.36 0.000 intron (NM_001365552, intron 17 of 23) SVA_D|Retroposon|SVA -48741 NR_110306 101929657 Hs.637461 NR_110306 ENSG00000273523 LOC101929657 - uncharacterized LOC101929657 ncRNA chrX-4672 chrX 82736800 82737010 + 6.36 0.000 Intergenic Intergenic -771385 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr1-14409 chr1 44655602 44655812 + 6.36 0.000 intron (NM_001300746, intron 1 of 1) intron (NM_001300746, intron 1 of 1) 15349 NR_145816 109623472 NR_145816 SNORD145 - small nucleolar RNA, C/D box 145 snoRNA chr7-4444 chr7 126689033 126689243 + 6.36 0.000 intron (NM_001371085, intron 7 of 10) LTR105_Mam|LTR|ERVL 369046 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr11-6566 chr11 71568146 71568356 + 6.36 0.000 Intergenic HAL1M8|LINE|L1 2688 NM_001012710 387273 Hs.661887 NM_001012710 ENSG00000204572 KRTAP5-10 KRTAP5.10 keratin associated protein 5-10 protein-coding chr19-6468 chr19 17184463 17184673 + 6.36 0.000 intron (NM_001130065, intron 16 of 39) intron (NM_001130065, intron 16 of 39) -30789 NM_018467 55850 Hs.16187 NM_018467 ENSG00000053501 USE1 D12|MDS032|P31|SLT1 unconventional SNARE in the ER 1 protein-coding chr5-8849 chr5 151947891 151948101 + 6.36 0.000 Intergenic Intergenic -10902 NR_109876 101927115 Hs.549665 NR_109876 ENSG00000254226 LINC01933 CTB-12O2.1 long intergenic non-protein coding RNA 1933 ncRNA chr4-3478 chr4 127709134 127709344 + 6.36 0.000 intron (NM_015693, intron 13 of 15) LTR16|LTR|ERVL -21161 NM_031291 83447 Hs.149030 NM_031291 ENSG00000151475 SLC25A31 AAC4|ANT 4|ANT4|SFEC35kDa solute carrier family 25 member 31 protein-coding chr19-3274 chr19 3133287 3133497 + 6.36 0.000 Intergenic Intergenic -2641 NM_002068 2769 Hs.73797 NM_002068 ENSG00000060558 GNA15 GNA16 G protein subunit alpha 15 protein-coding chr5-8692 chr5 141831628 141831838 + 6.36 0.000 Intergenic Intergenic 34469 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr3-10944 chr3 175899483 175899693 + 6.36 0.000 Intergenic Intergenic -123255 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr18-3262 chr18 50674523 50674733 + 6.36 0.000 intron (NM_002747, intron 2 of 5) L2b|LINE|L2 114541 NM_001292039 5596 Hs.433728 NM_002747 ENSG00000141639 MAPK4 ERK-4|ERK4|PRKM4|p63-MAPK|p63MAPK mitogen-activated protein kinase 4 protein-coding chr10-6553 chr10 73217608 73217818 + 6.36 0.000 intron (NM_173348, intron 7 of 13) MLT1F2|LTR|ERVL-MaLR 29542 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding chr12-6436 chr12 87259524 87259734 + 6.36 0.000 Intergenic Intergenic -71110 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr3-5546 chr3 2775722 2775932 + 6.36 0.000 intron (NM_175607, intron 6 of 24) L2a|LINE|L2 -116388 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr1-15749 chr1 171969368 171969578 + 6.36 0.000 intron (NM_001278252, intron 2 of 14) LTR48|LTR|ERV1 105281 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 - DNM3 intronic transcript 1 ncRNA chr4-6937 chr4 17303396 17303606 + 6.36 0.000 Intergenic L1MCb|LINE|L1 17381 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr2-12000 chr2 28161371 28161581 + 6.36 0.000 intron (NR_120504, intron 1 of 2) intron (NR_120504, intron 1 of 2) 45485 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr17-5772 chr17 61807015 61807225 + 6.36 0.000 intron (NM_032043, intron 7 of 19) intron (NM_032043, intron 7 of 19) 56439 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding chr2-14295 chr2 216427801 216428011 + 6.36 0.000 intron (NM_001127207, intron 6 of 17) intron (NM_001127207, intron 6 of 17) 15141 NM_001127207 50485 Hs.516674 NM_014140 ENSG00000138375 SMARCAL1 HARP|HHARP SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 protein-coding chr6-7581 chr6 73945038 73945248 + 6.36 0.000 Intergenic L1MA4A|LINE|L1 -124308 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr5-4173 chr5 105931997 105932207 + 6.36 0.000 Intergenic Intergenic 832628 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr4-4623 chr4 79358103 79358313 + 6.36 0.000 Intergenic Intergenic -32147 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr12-5884 chr12 53129805 53130015 + 6.36 0.000 Intergenic L2|LINE|L2 26424 NM_003578 8435 Hs.656544 NM_003578 ENSG00000167780 SOAT2 ACACT2|ACAT2|ARGP2 sterol O-acyltransferase 2 protein-coding chr16-5509 chr16 18770463 18770673 + 6.36 0.000 Intergenic AluSg|SINE|Alu 19766 NM_001019 6210 Hs.370504 NM_001019 ENSG00000134419 RPS15A DBA20|S15a ribosomal protein S15a protein-coding chr7-5753 chr7 74649310 74649520 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -8250 NM_001280800 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr10-8878 chr10 113128764 113128974 + 6.36 0.000 promoter-TSS (NM_001349870) promoter-TSS (NM_001349870) -402 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr7-3281 chr7 24379266 24379476 + 6.36 0.000 Intergenic LTR1D1|LTR|ERV1 95181 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr7-7288 chr7 38530652 38530862 + 6.36 0.000 intron (NM_001635, intron 2 of 20) intron (NM_001635, intron 2 of 20) 100616 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr2-13698 chr2 165541537 165541747 + 6.36 0.000 intron (NM_001172173, intron 3 of 6) L2c|LINE|L2 -30694 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr22-1777 chr22 29200467 29200677 + 6.36 0.000 Intergenic Intergenic -5324 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr16-4750 chr16 84776863 84777073 + 6.36 0.000 intron (NR_073577, intron 11 of 11) AluSz6|SINE|Alu -43017 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr2-14452 chr2 223313888 223314098 + 6.36 0.000 Intergenic Intergenic 262063 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr19-5023 chr19 47994496 47994706 + 6.36 0.000 promoter-TSS (NM_022142) promoter-TSS (NM_022142) -31 NM_022142 64100 Hs.104894 NM_022142 ENSG00000169393 ELSPBP1 E12|EDDM12|EL149|HE12 epididymal sperm binding protein 1 protein-coding chr2-14091 chr2 199701527 199701737 + 6.36 0.000 Intergenic L1PA12|LINE|L1 93564 NR_110270 101927641 Hs.549598 NR_110270 ENSG00000238217 LINC01877 - long intergenic non-protein coding RNA 1877 ncRNA chr12-5446 chr12 123081653 123081863 + 6.36 0.000 non-coding (NR_038290, exon 1 of 3) non-coding (NR_038290, exon 1 of 3) 374 NR_038290 100507091 Hs.683912 NR_038290 ENSG00000251497 PITPNM2-AS1 - PITPNM2 antisense RNA 1 ncRNA chr16-6486 chr16 58464687 58464897 + 6.36 0.000 promoter-TSS (NM_022910) promoter-TSS (NM_022910) -30 NM_022910 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr19-5216 chr19 32055517 32055727 + 6.36 0.000 Intergenic Intergenic 29760 NR_110675 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA chr21-1340 chr21 30833358 30833568 + 6.36 0.000 Intergenic LTR16E2|LTR|ERVL -3704 NM_181606 337878 Hs.407656 NM_181606 ENSG00000274749 KRTAP7-1 KAP7.1 keratin associated protein 7-1 (gene/pseudogene) protein-coding chr8-6838 chr8 98152986 98153196 + 6.36 0.000 intron (NM_015029, intron 14 of 15) AluJr|SINE|Alu 35251 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr2-6142 chr2 230985554 230985764 + 6.36 0.000 non-coding (NR_033879, exon 6 of 6) non-coding (NR_033879, exon 6 of 6) 10373 NR_033879 348761 Hs.404807 NR_033879 ENSG00000238062 SPATA3-AS1 - SPATA3 antisense RNA 1 (head to head) ncRNA chr3-7373 chr3 61191572 61191782 + 6.36 0.000 intron (NR_148922, intron 2 of 3) intron (NR_148922, intron 2 of 3) 59775 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr5-9057 chr5 170505291 170505501 + 6.36 0.000 intron (NM_001278339, intron 1 of 7) intron (NM_001278339, intron 1 of 7) 1376 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr2-12483 chr2 61819239 61819449 + 6.36 0.000 Intergenic AluJb|SINE|Alu 34716 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr3-10024 chr3 102676387 102676597 + 6.36 0.000 Intergenic Intergenic 241477 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr20-2766 chr20 51600216 51600426 + 6.36 0.000 3' UTR (NM_006045, exon 28 of 28) 3' UTR (NM_006045, exon 28 of 28) -37482 NM_001136021 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr6-5639 chr6 71886652 71886862 + 6.36 0.000 promoter-TSS (NM_001350411) promoter-TSS (NM_001350411) 54 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr4-3271 chr4 112730907 112731117 + 6.36 0.000 intron (NM_001354269, intron 1 of 43) AluSc|SINE|Alu 24994 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr8-5745 chr8 139906746 139906956 + 6.36 0.000 intron (NM_001160372, intron 20 of 22) intron (NM_001160372, intron 20 of 22) 193684 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr18-2231 chr18 68960201 68960411 + 6.36 0.000 intron (NM_001093729, intron 8 of 9) L1MA3|LINE|L1 162226 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr6-6378 chr6 74155077 74155287 + 6.36 0.000 intron (NR_110856, intron 1 of 3) L4_A_Mam|LINE|RTE-X 85731 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr9-6775 chr9 27208124 27208334 + 6.36 0.000 intron (NM_001290077, intron 14 of 21) intron (NM_001290077, intron 14 of 21) 74564 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA chr1-9569 chr1 42440191 42440401 + 6.36 0.000 intron (NM_001146192, intron 2 of 6) L1MB7|LINE|L1 15726 NM_032257 84217 Hs.294009 NM_032257 ENSG00000066185 ZMYND12 - zinc finger MYND-type containing 12 protein-coding chr6-7967 chr6 113205497 113205707 + 6.36 0.000 Intergenic Intergenic 227845 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr2-12801 chr2 88245826 88246036 + 6.36 0.000 Intergenic AluSx|SINE|Alu 72792 NM_018271 55258 Hs.739080 NM_018271 ENSG00000144115 THNSL2 SOFAT|THS2|TSH2 threonine synthase like 2 protein-coding chr5-6461 chr5 171321822 171322032 + 6.36 0.000 Intergenic Intergenic 12679 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chrX-3719 chrX 118308817 118309027 + 6.36 0.000 Intergenic Intergenic -37151 NM_001184966 54521 Hs.98510 NM_019045 ENSG00000131725 WDR44 RAB11BP|RPH11|SYM-4 WD repeat domain 44 protein-coding chr21-1814 chr21 39536366 39536576 + 6.36 0.000 Intergenic LTR8|LTR|ERV1 76351 NR_026543 114041 Hs.375120 NM_153754 ENSG00000184809 B3GALT5-AS1 C21orf88 B3GALT5 antisense RNA 1 ncRNA chr7-9417 chr7 132475758 132475968 + 6.36 0.000 intron (NM_001105543, intron 3 of 3) intron (NM_001105543, intron 3 of 3) 100607 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr19-2719 chr19 33081261 33081471 + 6.36 0.000 intron (NR_135270, intron 1 of 20) intron (NR_135270, intron 1 of 20) 185 NM_018025 55094 Hs.466436 NM_018025 ENSG00000076650 GPATCH1 ECGP|GPATC1 G-patch domain containing 1 protein-coding chr1-10155 chr1 109263730 109263940 + 6.36 0.000 intron (NM_001408, intron 9 of 33) intron (NM_001408, intron 9 of 33) 14296 NM_001408 1952 Hs.57652 NM_001408 ENSG00000143126 CELSR2 ADGRC2|CDHF10|EGFL2|Flamingo1|MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 protein-coding chrX-2524 chrX 97037303 97037513 + 6.36 0.000 intron (NM_007309, intron 17 of 26) intron (NM_007309, intron 17 of 26) 153500 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr11-10232 chr11 99454877 99455087 + 6.36 0.000 intron (NM_001243271, intron 2 of 20) intron (NM_001243271, intron 2 of 20) -101163 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr7-6990 chr7 111789743 111789953 + 6.36 0.000 intron (NM_001363540, intron 31 of 52) intron (NM_001363540, intron 31 of 52) -18657 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr22-2046 chr22 43272363 43272573 + 6.36 0.000 intron (NM_173050, intron 4 of 21) intron (NM_173050, intron 4 of 21) -3474 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr1-7875 chr1 110606265 110606475 + 6.36 0.000 promoter-TSS (NM_004974) promoter-TSS (NM_004974) -12 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr2-13341 chr2 134259784 134259994 + 6.36 0.000 intron (NM_001371457, intron 2 of 16) L2a|LINE|L2 5817 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr5-3910 chr5 161059931 161060141 + 6.36 0.000 Intergenic ERVL-int|LTR|ERVL -121410 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr8-4678 chr8 139065094 139065304 + 6.36 0.000 Intergenic L2|LINE|L2 -151158 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr3-9742 chr3 68799208 68799418 + 6.36 0.000 intron (NM_001005527, intron 3 of 5) MLT1A0|LTR|ERVL-MaLR 133234 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr10-4267 chr10 1098161 1098371 + 6.36 0.000 intron (NM_014023, intron 9 of 13) MLT1A|LTR|ERVL-MaLR -41562 NM_001317955 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr14-5349 chr14 103017424 103017634 + 6.36 0.000 intron (NM_006035, intron 1 of 36) L1MC4|LINE|L1 40020 NM_006035 9578 Hs.654634 NM_006035 ENSG00000198752 CDC42BPB MRCKB CDC42 binding protein kinase beta protein-coding chr5-7669 chr5 54388328 54388538 + 6.36 0.000 intron (NR_126379, intron 1 of 4) intron (NR_126379, intron 1 of 4) -67266 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr3-10778 chr3 158403004 158403214 + 6.36 0.000 intron (NM_001271838, intron 6 of 9) intron (NM_001271838, intron 6 of 9) -123599 NR_148407 110599565 NR_148407 UC.134 - long non-coding RNA uc.134 ncRNA chr2-7913 chr2 57961801 57962011 + 6.36 0.000 intron (NM_001288838, intron 1 of 15) AluJb|SINE|Alu 54255 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr2-13005 chr2 106725828 106726038 + 6.36 0.000 Intergenic LTR16A2|LTR|ERVL 160095 NR_136313 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr2-8519 chr2 129799540 129799750 + 6.36 0.000 Intergenic L2c|LINE|L2 77846 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr9-8587 chr9 128018252 128018462 + 6.36 0.000 Intergenic AluJr4|SINE|Alu -37368 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr21-1357 chr21 36673143 36673353 + 6.36 0.000 Intergenic AluJb|SINE|Alu -25867 NM_009586 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 SIM bHLH transcription factor 2 protein-coding chr5-4674 chr5 38029467 38029677 + 6.36 0.000 intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) 3875 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr7-9689 chr7 153479238 153479448 + 6.36 0.000 Intergenic L1MA4A|LINE|L1 -67109 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr2-9201 chr2 216743860 216744070 + 6.36 0.000 Intergenic Intergenic -48416 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr1-14956 chr1 88105377 88105587 + 6.36 0.000 Intergenic Intergenic -578662 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr7-3572 chr7 22371231 22371441 + 6.36 0.000 Intergenic Intergenic -14182 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr8-7456 chr8 141528491 141528701 + 6.36 0.000 Intergenic Intergenic -21366 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr9-7661 chr9 68974763 68974973 + 6.36 0.000 intron (NR_110647, intron 1 of 2) intron (NR_110647, intron 1 of 2) 973 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chr8-3404 chr8 66972221 66972431 + 6.36 0.000 intron (NM_001364911, intron 5 of 6) intron (NM_001364911, intron 5 of 6) -9735 NM_001193502 100129654 Hs.120040 NM_001193502 ENSG00000261787 TCF24 TCF-24|bHLHa25 transcription factor 24 protein-coding chr6-8017 chr6 117775616 117775826 + 6.36 0.000 Intergenic Intergenic 100252 NM_138459 116150 Hs.289008 NM_138459 ENSG00000153989 NUS1 C6orf68|CDG1AA|MGC:7199|MRD55|NgBR|TANGO14 NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding chr1-13435 chr1 3032259 3032469 + 6.36 0.000 Intergenic Intergenic 10897 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr3-9062 chr3 25354743 25354953 + 6.36 0.000 intron (NM_001290300, intron 1 of 7) intron (NM_001290300, intron 1 of 7) 14046 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr11-9234 chr11 41460193 41460403 + 6.36 0.000 promoter-TSS (NM_001258419) promoter-TSS (NM_001258419) -646 NM_001258419 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding KZ208915.1-4 KZ208915.1 1513556 1513766 + 6.36 0.000 NA NA NA NA chr12-3571 chr12 27257085 27257295 + 6.36 0.000 intron (NM_015000, intron 1 of 13) MamRep605|LTR?|LTR? 12904 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr6-1848 chr6 17987810 17988020 + 6.36 0.000 promoter-TSS (NM_022113) promoter-TSS (NM_022113) -280 NM_001105567 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr1-14830 chr1 75537662 75537872 + 6.36 0.000 intron (NM_001320285, intron 2 of 25) intron (NM_001320285, intron 2 of 25) 73347 NM_001320287 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr2-11907 chr2 24346315 24346525 + 6.36 0.000 intron (NM_001348182, intron 1 of 38) L1MC3|LINE|L1 14116 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr12-7939 chr12 109120620 109120830 + 6.36 0.000 intron (NM_001093, intron 1 of 52) intron (NM_001093, intron 1 of 52) 4138 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr2-10764 chr2 39488594 39488804 + 6.36 0.000 intron (NR_037875, intron 3 of 5) AluJb|SINE|Alu 51283 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr2-13095 chr2 112457860 112458070 + 6.36 0.000 Intergenic THE1C|LTR|ERVL-MaLR -24191 NM_153712 150465 Hs.358997 NM_153712 ENSG00000114999 TTL - tubulin tyrosine ligase protein-coding chr7-8574 chr7 65460823 65461033 + 6.36 0.000 Intergenic Intergenic 87073 NM_001287533 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr13-3490 chr13 20144420 20144630 + 6.36 0.000 intron (NM_021954, intron 1 of 1) intron (NM_021954, intron 1 of 1) 16527 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr9-7634 chr9 38690465 38690675 + 6.36 0.000 Intergenic Intergenic 69482 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr14-3782 chr14 56915017 56915227 + 6.36 0.000 intron (NR_029385, intron 3 of 3) Tigger3b|DNA|TcMar-Tigger 101964 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA chr12-5073 chr12 93066854 93067064 + 6.36 0.000 intron (NR_040096, intron 3 of 4) MLT1L|LTR|ERVL-MaLR -107407 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr5-9046 chr5 169762864 169763074 + 6.36 0.000 intron (NR_156756, intron 25 of 52) intron (NR_156756, intron 25 of 52) 125694 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr1-6486 chr1 22151938 22152148 + 6.36 0.000 Intergenic (TCCT)n|Simple_repeat|Simple_repeat -8946 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr1-16386 chr1 222886980 222887190 + 6.36 0.000 intron (NM_032890, intron 1 of 9) intron (NM_032890, intron 1 of 9) -41339 NM_001369594 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr2-14008 chr2 191105042 191105252 + 6.36 0.000 intron (NM_003151, intron 3 of 23) L2|LINE|L2 45847 NM_003151 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr2-13044 chr2 109061055 109061265 + 6.36 0.000 Intergenic Intergenic -68045 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr9-5449 chr9 98017225 98017435 + 6.36 0.000 Intergenic L2b|LINE|L2 33989 NM_006401 10541 Hs.730654 NM_006401 ENSG00000136938 ANP32B APRIL|PHAPI2|SSP29 acidic nuclear phosphoprotein 32 family member B protein-coding chr15-3851 chr15 85157815 85158025 + 6.36 0.000 Intergenic MER41A|LTR|ERV1 76861 NR_158179 101929479 Hs.681665 NR_158179 LOC101929479 - golgin A2 pseudogene pseudo chr13-3525 chr13 22969552 22969762 + 6.36 0.000 Intergenic Intergenic -53288 NR_138043 100996930 Hs.380803 NR_138043 LINC00621 - long intergenic non-protein coding RNA 621 ncRNA chr18-2108 chr18 51313374 51313584 + 6.36 0.000 Intergenic Intergenic -78563 NR_040075 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr17-7430 chr17 10848440 10848650 + 6.36 0.000 Intergenic Intergenic -10458 NM_001101387 644139 Hs.553909 NM_001101387 ENSG00000233670 PIRT - phosphoinositide interacting regulator of transient receptor potential channels protein-coding chr3-2962 chr3 66972001 66972211 + 6.36 0.000 Intergenic Intergenic -26201 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr3-5273 chr3 116943034 116943244 + 6.36 0.000 Intergenic L1PB3|LINE|L1 21708 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr3-2810 chr3 11220354 11220564 + 6.36 0.000 intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) -5522 NM_001098211 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr11-6340 chr11 62991882 62992092 + 6.36 0.000 TTS (NM_001184733) TTS (NM_001184733) -7020 NM_153278 9356 Hs.369252 NM_004790 ENSG00000197901 SLC22A6 HOAT1|OAT1|PAHT|ROAT1 solute carrier family 22 member 6 protein-coding chr17-5298 chr17 22286416 22286626 + 6.36 0.000 Intergenic MER52A|LTR|ERV1 -12243 NR_028336 284123 Hs.348578 NM_203392 ENSG00000178130 FAM27E5 FAM27L family with sequence similarity E5 ncRNA chr21-1638 chr21 22902305 22902515 + 6.36 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -176874 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA chr10-7778 chr10 35171760 35171970 + 6.36 0.000 intron (NM_001267565, intron 2 of 2) Charlie13a|DNA|hAT-Charlie -3722 NM_001267566 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr9-6364 chr9 19174242 19174452 + 6.36 0.000 Intergenic Intergenic -46741 NR_038064 123 Hs.3416 NM_001122 ENSG00000147872 PLIN2 ADFP|ADRP perilipin 2 protein-coding chr16-6572 chr16 66400183 66400393 + 6.36 0.000 intron (NM_001795, intron 10 of 11) intron (NM_001795, intron 10 of 11) -8236 NR_046242 100505865 Hs.314372 NR_046242 LINC00920 - long intergenic non-protein coding RNA 920 ncRNA chr21-1733 chr21 33660086 33660296 + 6.36 0.000 intron (NM_001001132, intron 1 of 29) intron (NM_001001132, intron 1 of 29) 17690 NM_001331010 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr19-6399 chr19 13451838 13452048 + 6.36 0.000 intron (NM_023035, intron 3 of 46) AluJo|SINE|Alu 54517 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr3-2288 chr3 101512940 101513150 + 6.36 0.000 intron (NM_020654, intron 1 of 23) CpG 167 NM_001077203 57337 Hs.529551 NM_020654 ENSG00000138468 SENP7 - SUMO specific peptidase 7 protein-coding chr12-5148 chr12 100519770 100519980 + 6.36 0.000 intron (NM_001206978, intron 4 of 9) MamGypLTR2c|LTR|Gypsy 16515 NM_001206992 9971 Hs.282735 NM_005123 ENSG00000012504 NR1H4 BAR|FXR|HRR-1|HRR1|PFIC5|RIP14 nuclear receptor subfamily 1 group H member 4 protein-coding chr20-3440 chr20 49149865 49150075 + 6.36 0.000 intron (NM_004602, intron 5 of 13) intron (NM_004602, intron 5 of 13) 38400 NM_001319134 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding chr14-2894 chr14 36443906 36444116 + 6.36 0.000 Intergenic Intergenic 69524 NR_161363 253970 Hs.509165 NM_001101341 ENSG00000229415 SFTA3 NANCI|SFTPH|SP-H|SPH surfactant associated 3 ncRNA chr10-7588 chr10 19119903 19120113 + 6.36 0.000 intron (NM_001142308, intron 5 of 39) L2a|LINE|L2 71207 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr13-3229 chr13 27717913 27718123 + 6.36 0.000 Intergenic AluSx3|SINE|Alu -74465 NM_145657 219409 Hs.351785 NM_145657 ENSG00000169840 GSX1 GSH1|Gsh-1 GS homeobox 1 protein-coding chr2-14042 chr2 194797502 194797712 + 6.36 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 67012 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr11-8455 chr11 115518096 115518306 + 6.36 0.000 Intergenic Intergenic -13786 NM_014333 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr14-2772 chr14 18627876 18628086 + 6.36 0.000 Intergenic MIRb|SINE|MIR 5653 NR_046104 642426 Hs.578301 NR_046104 ENSG00000257504 LINC02297 - long intergenic non-protein coding RNA 2297 ncRNA chr22-3687 chr22 24189678 24189888 + 6.36 0.000 TTS (NM_019601) TTS (NM_019601) 8296 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr20-3082 chr20 17355928 17356138 + 6.36 0.000 intron (NM_002594, intron 2 of 11) LTR16B2|LTR|ERVL 128993 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr5-6839 chr5 115174854 115175064 + 6.36 0.000 intron (NM_001017397, intron 1 of 1) intron (NM_001017397, intron 1 of 1) -5051 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chrX-3738 chrX 121282020 121282230 + 6.36 0.000 Intergenic L1PA3|LINE|L1 -88847 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr1-14132 chr1 31674935 31675145 + 6.36 0.000 intron (NM_001856, intron 43 of 70) intron (NM_001856, intron 43 of 70) 28977 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr15-3885 chr15 94538047 94538257 + 6.36 0.000 Intergenic MSTD|LTR|ERVL-MaLR 182222 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr21-1783 chr21 37608852 37609062 + 6.36 0.000 3' UTR (NM_002240, exon 4 of 4) 3' UTR (NM_002240, exon 4 of 4) 188658 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr12-2855 chr12 5796349 5796559 + 6.36 0.000 intron (NM_001278596, intron 10 of 25) (CA)n|Simple_repeat|Simple_repeat 148805 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr3-8428 chr3 113225324 113225534 + 6.36 0.000 intron (NM_001301861, intron 2 of 19) intron (NM_001301861, intron 2 of 19) 13313 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr10-7644 chr10 24963715 24963925 + 6.36 0.000 Intergenic Intergenic -11214 NM_020200 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chrX-2553 chrX 100600510 100600720 + 6.36 0.000 TTS (NM_022144) TTS (NM_022144) 15679 NM_022144 64102 Hs.132957 NM_022144 ENSG00000000005 TNMD BRICD4|CHM1L|TEM tenomodulin protein-coding chr5-4211 chr5 122756437 122756647 + 6.36 0.000 Intergenic Intergenic -18454 NM_001278199 6643 Hs.125352 NM_003100 ENSG00000205302 SNX2 TRG-9 sorting nexin 2 protein-coding chrX-1141 chrX 36757704 36757914 + 6.36 0.000 Intergenic Intergenic -250550 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr6-4793 chr6 77593136 77593346 + 6.36 0.000 Intergenic HERVL-int|LTR|ERVL -57033 NM_001282136 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr7-7244 chr7 27253347 27253557 + 6.36 0.000 Intergenic Intergenic -6223 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr1-5840 chr1 233420268 233420478 + 6.36 0.000 Intergenic L1MD1|LINE|L1 92649 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr18-3317 chr18 55765340 55765550 + 6.36 0.000 Intergenic Intergenic 14976 NR_145453 100132501 Hs.634003 NR_145452 LINC01415 TCONS_00026208 long intergenic non-protein coding RNA 1415 ncRNA chr5-3233 chr5 93789474 93789684 + 6.36 0.000 intron (NM_032042, intron 8 of 10) intron (NM_032042, intron 8 of 10) -47979 NM_153216 134187 Hs.678995 NM_153216 ENSG00000248483 POU5F2 SPRM-1 POU domain class 5, transcription factor 2 protein-coding chr11-10682 chr11 128695934 128696144 + 6.36 0.000 promoter-TSS (NR_038908) promoter-TSS (NR_038908) -16 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr2-13283 chr2 128435760 128435970 + 6.36 0.000 Intergenic Intergenic -116997 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr10-6196 chr10 28478432 28478642 + 6.36 0.000 intron (NR_134496, intron 1 of 2) AluJo|SINE|Alu 17276 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chr11-5975 chr11 18787996 18788206 + 6.36 0.000 intron (NM_006906, intron 1 of 14) L2c|LINE|L2 3697 NM_001039970 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr2-10449 chr2 210198358 210198568 + 6.36 0.000 intron (NM_001608, intron 8 of 10) intron (NM_001608, intron 8 of 10) 26984 NM_001608 33 Hs.471277 NM_001608 ENSG00000115361 ACADL ACAD4|LCAD acyl-CoA dehydrogenase long chain protein-coding chr4-8317 chr4 144933455 144933665 + 6.36 0.000 Intergenic L1PA13|LINE|L1 163822 NM_001318367 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr7-3805 chr7 93772065 93772275 + 6.36 0.000 Intergenic Intergenic 55242 NR_039796 100616206 NR_039796 ENSG00000265423 MIR4652 - microRNA 4652 ncRNA chr10-2689 chr10 101136252 101136462 + 6.36 0.000 intron (NM_005521, intron 2 of 2) intron (NM_005521, intron 2 of 2) 4909 NR_130724 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr9-8478 chr9 124040204 124040414 + 6.36 0.000 Intergenic Intergenic 28541 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr4-3656 chr4 25915215 25915425 + 6.36 0.000 intron (NM_001145432, intron 1 of 2) intron (NM_001145432, intron 1 of 2) 1128 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr9-3179 chr9 126608648 126608858 + 6.36 0.000 Intergenic Intergenic -5690 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr2-13676 chr2 163693037 163693247 + 6.36 0.000 intron (NM_001321825, intron 1 of 1) intron (NM_001321825, intron 1 of 1) 42866 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr7-8510 chr7 53911658 53911868 + 6.36 0.000 Intergenic Intergenic -99832 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr11-4357 chr11 73619600 73619810 + 6.36 0.000 Intergenic ERVL-B4-int|LTR|ERVL -21593 NM_001286051 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr14-2047 chr14 64970918 64971128 + 6.36 0.000 intron (NM_001330182, intron 1 of 7) intron (NM_001330182, intron 1 of 7) 1313 NM_001308154 376267 Hs.512492 NM_198686 ENSG00000139998 RAB15 - RAB15, member RAS oncogene family protein-coding chr2-10082 chr2 46800443 46800653 + 6.36 0.000 Intergenic Intergenic -16120 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr8-5949 chr8 20073987 20074197 + 6.36 0.000 Intergenic Intergenic 109044 NM_003053 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr10-7797 chr10 36904944 36905154 + 6.36 0.000 Intergenic Intergenic -220808 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr17-2151 chr17 43452029 43452239 + 6.36 0.000 TTS (NR_146952) TTS (NR_146952) 7328 NR_031751 100313779 NR_031751 ENSG00000284344 MIR2117 - microRNA 2117 ncRNA chr2-7802 chr2 44082842 44083052 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -85856 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr1-13254 chr1 221394342 221394552 + 6.36 0.000 Intergenic Intergenic -58151 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr22-3093 chr22 45710355 45710565 + 6.36 0.000 intron (NM_013236, intron 5 of 11) L2a|LINE|L2 38626 NM_013236 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr5-6984 chr5 149581574 149581784 + 6.36 0.000 intron (NM_001001669, intron 1 of 12) intron (NM_001001669, intron 1 of 12) 181 NM_001001669 389337 Hs.256206 NM_001001669 ENSG00000183111 ARHGEF37 - Rho guanine nucleotide exchange factor 37 protein-coding chr6-2341 chr6 125154149 125154359 + 6.36 0.000 promoter-TSS (NM_001003395) promoter-TSS (NM_001003395) 8 NM_001003395 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr5-4781 chr5 55930651 55930861 + 6.36 0.000 Intergenic AluJr4|SINE|Alu 64207 NR_120480 3572 Hs.532082 NM_002184 ENSG00000134352 IL6ST CD130|CDW130|GP130|IL-6RB interleukin 6 signal transducer protein-coding chr1-15127 chr1 102550767 102550977 + 6.36 0.000 Intergenic THE1-int|LTR|ERVL-MaLR -553638 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr1-2357 chr1 41662051 41662261 + 6.36 0.000 intron (NM_001127714, intron 1 of 7) CpG -177473 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr2-8671 chr2 149514263 149514473 + 6.36 0.000 Intergenic Intergenic -72990 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr1-5099 chr1 116574818 116575028 + 6.36 0.000 3' UTR (NM_001542, exon 12 of 12) 3' UTR (NM_001542, exon 12 of 12) -3830 NM_001144822 965 Hs.34341 NM_001779 ENSG00000116815 CD58 LFA-3|LFA3|ag3 CD58 molecule protein-coding chr13-3067 chr13 39106295 39106505 + 6.36 0.000 Intergenic LTR18B|LTR|ERVL 67944 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr17-4917 chr17 75492183 75492393 + 6.36 0.000 intron (NM_014738, intron 14 of 31) intron (NM_014738, intron 14 of 31) -6260 NR_106843 102466911 NR_106843 ENSG00000284595 MIR6785 hsa-mir-6785 microRNA 6785 ncRNA chr6-3420 chr6 110328321 110328531 + 6.36 0.000 intron (NM_001123364, intron 1 of 4) intron (NM_001123364, intron 1 of 4) 1632 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr5-8609 chr5 138717003 138717213 + 6.36 0.000 Intergenic Intergenic 36201 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr20-3670 chr20 12170258 12170468 + 6.36 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 252470 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr7-5169 chr7 6579518 6579728 + 6.36 0.000 intron (NM_001371296, intron 2 of 7) intron (NM_001371296, intron 2 of 7) 2169 NM_001371299 chr4-2859 chr4 69521354 69521564 + 6.36 0.000 intron (NM_001297616, intron 1 of 6) MER52A|LTR|ERV1 4555 NM_001297616 7363 Hs.285887 NM_021139 ENSG00000156096 UGT2B4 HLUG25|UDPGT2B4|UDPGTH1|UDPGTh-1|UGT2B11 UDP glucuronosyltransferase family 2 member B4 protein-coding chr22-1882 chr22 43438126 43438336 + 6.36 0.000 intron (NM_001362786, intron 3 of 6) intron (NM_001362786, intron 3 of 6) 21679 NM_001362786 758 Hs.159538 NM_001044370 ENSG00000186732 MPPED1 239AB|C22orf1|FAM1A metallophosphoesterase domain containing 1 protein-coding chrX-2293 chrX 52852407 52852617 + 6.36 0.000 Intergenic MER20B|DNA|hAT-Charlie 14789 NM_130776 170626 Hs.43879 NM_130776 ENSG00000171402 XAGE3 CT12.3a|CT12.3b|GAGED4|PLAC6|XAGE-3|pp9012 X antigen family member 3 protein-coding chr3-9236 chr3 38355261 38355471 + 6.36 0.000 intron (NR_146068, intron 2 of 16) MLT1H|LTR|ERVL-MaLR 8581 NM_005108 9942 Hs.659985 NM_005108 ENSG00000093217 XYLB - xylulokinase protein-coding chr7-8473 chr7 49018600 49018810 + 6.36 0.000 Intergenic (GCGTGT)n|Simple_repeat|Simple_repeat 94158 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr4-8406 chr4 152063250 152063460 + 6.36 0.000 Intergenic MER20B|DNA|hAT-Charlie -37398 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr17-7733 chr17 33657072 33657282 + 6.36 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -123417 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr6-6511 chr6 121010514 121010724 + 6.36 0.000 Intergenic Intergenic 323861 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr3-6262 chr3 70550608 70550818 + 6.36 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -238075 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr5-3319 chr5 128539067 128539277 + 6.36 0.000 promoter-TSS (NM_001999) promoter-TSS (NM_001999) -927 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr4-5486 chr4 73852979 73853189 + 6.36 0.000 promoter-TSS (NM_002620) promoter-TSS (NM_002620) -212 NM_002620 5197 Hs.72933 NM_002620 ENSG00000109272 PF4V1 CXCL4L1|CXCL4V1|PF4-ALT|PF4A|SCYB4V1 platelet factor 4 variant 1 protein-coding chr19-6454 chr19 16554339 16554549 + 6.36 0.000 intron (NM_024881, intron 5 of 5) AluJr|SINE|Alu -12007 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr19-7072 chr19 55325018 55325228 + 6.36 0.000 intron (NR_104071, intron 1 of 6) intron (NR_104071, intron 1 of 6) 218 NM_001282011 284417 Hs.382625 NM_001085488 ENSG00000180061 TMEM150B DRAM3|TMEM224|TTN2 transmembrane protein 150B protein-coding chr1-11202 chr1 243917975 243918185 + 6.36 0.000 intron (NR_033883, intron 1 of 11) intron (NR_033883, intron 1 of 11) 678 NR_033883 339529 Hs.209374 NR_033883 ENSG00000226828 LINC02774 - long intergenic non-protein coding RNA 2774 ncRNA chr20-4280 chr20 50027784 50027994 + 6.36 0.000 Intergenic Intergenic 13740 NR_051976 100887755 Hs.195705 NR_051976 TRERNA1 LINC00651|treRNA translation regulatory long non-coding RNA 1 ncRNA chr12-5219 chr12 106722974 106723184 + 6.36 0.000 intron (NM_001206691, intron 13 of 17) intron (NM_001206691, intron 13 of 17) 38350 NM_032491 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr17-5602 chr17 48194847 48195057 + 6.36 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -38441 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr12-6858 chr12 17046166 17046376 + 6.36 0.000 Intergenic Intergenic 57524 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo chr2-10376 chr2 173055513 173055723 + 6.36 0.000 Intergenic L2b|LINE|L2 -20228 NM_133646 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr1-9423 chr1 32895148 32895358 + 6.36 0.000 TTS (NM_002143) TTS (NM_002143) 6136 NM_001329722 113452 Hs.534521 NM_033504 ENSG00000121900 TMEM54 BCLP|CAC-1|CAC1 transmembrane protein 54 protein-coding chr2-11288 chr2 185578750 185578960 + 6.36 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 159864 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr1-14030 chr1 27194994 27195204 + 6.36 0.000 Intergenic L2b|LINE|L2 -39533 NM_015023 23038 Hs.469154 NM_015023 ENSG00000142784 WDTC1 ADP|DCAF9 WD and tetratricopeptide repeats 1 protein-coding chr4-8360 chr4 147916588 147916798 + 6.36 0.000 intron (NM_024605, intron 13 of 22) intron (NM_024605, intron 13 of 22) 134098 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr4-6263 chr4 75822006 75822216 + 6.36 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 80341 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr14-4318 chr14 22028384 22028594 + 6.36 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -357472 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr9-5132 chr9 36776106 36776316 + 6.36 0.000 Intergenic Intergenic 47388 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr1-10026 chr1 87488893 87489103 + 6.36 0.000 Intergenic Intergenic -117343 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr1-11325 chr1 22553068 22553278 + 6.36 0.000 Intergenic Intergenic -10316 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr4-6873 chr4 11181887 11182097 + 6.36 0.000 Intergenic Intergenic -186835 NR_030298 693157 NR_030298 ENSG00000207716 MIR572 MIRN572|hsa-mir-572 microRNA 572 ncRNA chr12-5828 chr12 33569360 33569570 + 6.36 0.000 Intergenic L1PB1|LINE|L1 -129646 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding chrX-5185 chrX 133812461 133812671 + 6.36 0.000 intron (NM_001164619, intron 1 of 6) intron (NM_001164619, intron 1 of 6) -84877 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr22-3660 chr22 22817066 22817276 + 6.36 0.000 Intergenic Intergenic -5605 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr3-6306 chr3 75858895 75859105 + 6.36 0.000 Intergenic MER21C|LTR|ERVL -73451 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr5-5163 chr5 109247983 109248193 + 6.36 0.000 intron (NR_149040, intron 3 of 3) intron (NR_149040, intron 3 of 3) 78281 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr4-7827 chr4 100589156 100589366 + 6.36 0.000 Intergenic L2a|LINE|L2 -71239 NM_016242 51705 Hs.152913 NM_016242 ENSG00000164035 EMCN EMCN2|MUC14 endomucin protein-coding chr10-6781 chr10 2866175 2866385 + 6.36 0.000 Intergenic Intergenic 200653 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr16-4506 chr16 58110209 58110419 + 6.36 0.000 Intergenic Intergenic 19067 NM_013242 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr1-11679 chr1 3166132 3166342 + 6.36 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 38262 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr7-5398 chr7 33718883 33719093 + 6.36 0.000 Intergenic Intergenic -185927 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr13-4230 chr13 95201973 95202183 + 6.36 0.000 intron (NM_001105515, intron 8 of 20) MLT2D|LTR|ERVL -8266 NR_145733 109616987 NR_145733 SNORD13G - small nucleolar RNA, C/D box 13G snoRNA chr2-8652 chr2 147133205 147133415 + 6.36 0.000 Intergenic Intergenic 546253 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr14-3149 chr14 68904147 68904357 + 6.36 0.000 intron (NM_001102, intron 7 of 20) intron (NM_001102, intron 7 of 20) 75050 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr2-8863 chr2 175599954 175600164 + 6.36 0.000 Intergenic Intergenic 402208 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr4-2767 chr4 15807525 15807735 + 6.36 0.000 intron (NR_132660, intron 1 of 6) LTR80A|LTR|ERVL 29302 NM_001775 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr21-1729 chr21 33342882 33343092 + 6.36 0.000 intron (NM_000629, intron 3 of 10) L2|LINE|L2 18017 NM_000629 3454 Hs.529400 NM_000629 ENSG00000142166 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon alpha and beta receptor subunit 1 protein-coding chr2-8708 chr2 154528004 154528214 + 6.36 0.000 Intergenic L1MA2|LINE|L1 -70671 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr4-5993 chr4 186016396 186016606 + 6.36 0.000 Intergenic MER39|LTR|ERV1 -52654 NM_003265 7098 Hs.657724 NM_003265 ENSG00000164342 TLR3 CD283|IIAE2 toll like receptor 3 protein-coding chr1-7511 chr1 154318195 154318405 + 6.36 0.000 Intergenic MER41-int|LTR|ERV1 -2793 NM_080429 89872 Hs.259048 NM_080429 ENSG00000143595 AQP10 AQPA_HUMAN aquaporin 10 protein-coding chr2-5317 chr2 74523371 74523581 + 6.36 0.000 exon (NM_133637, exon 5 of 12) exon (NM_133637, exon 5 of 12) 2755 NM_133637 165545 Hs.191705 NM_133637 ENSG00000144045 DQX1 - DEAQ-box RNA dependent ATPase 1 protein-coding chr5-8033 chr5 90331255 90331465 + 6.36 0.000 Intergenic L1M2|LINE|L1 -41289 NR_120601 101929495 Hs.346679 NR_120601 LINC01339 - long intergenic non-protein coding RNA 1339 ncRNA chr13-3330 chr13 63265499 63265709 + 6.36 0.000 intron (NR_126409, intron 2 of 6) MER57C2|LTR|ERV1 62490 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chrX-2041 chrX 17374135 17374345 + 6.36 0.000 promoter-TSS (NM_001291867) promoter-TSS (NM_001291867) -960 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chrX-1693 chrX 12791198 12791408 + 6.36 0.000 promoter-TSS (NM_002765) promoter-TSS (NM_002765) -52 NM_002765 5634 Hs.654581 NM_002765 ENSG00000101911 PRPS2 PRSII phosphoribosyl pyrophosphate synthetase 2 protein-coding chr22-4281 chr22 49587090 49587300 + 6.36 0.000 intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) -43729 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr1-15265 chr1 114281923 114282133 + 6.36 0.000 Intergenic THE1B|LTR|ERVL-MaLR -128159 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chrX-4724 chrX 89842634 89842844 + 6.36 0.000 Intergenic LTR53|LTR|ERVL -79169 NM_138960 90316 Hs.592220 NM_138960 ENSG00000153779 TGIF2LX TGIFLX TGFB induced factor homeobox 2 like X-linked protein-coding chr17-5421 chr17 34868666 34868876 + 6.36 0.000 Intergenic HAL1ME|LINE|L1 92689 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr3-8931 chr3 13575793 13576003 + 6.36 0.000 intron (NM_001004019, intron 2 of 17) intron (NM_001004019, intron 2 of 17) 7158 NM_001165035 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr3-5182 chr3 68582929 68583139 + 6.36 0.000 Intergenic L1PA6|LINE|L1 82397 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr19-6719 chr19 37848543 37848753 + 6.36 0.000 intron (NR_040015, intron 2 of 5) L1M7|LINE|L1 6548 NR_040015 100631378 Hs.726940 NR_040015 ENSG00000225868 LOC100631378 - uncharacterized 100631378 ncRNA chr13-1423 chr13 40955662 40955872 + 6.36 0.000 intron (NM_001370329, intron 4 of 9) SVA_D|Retroposon|SVA 26515 NM_001145353 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr11-8944 chr11 18733514 18733724 + 6.36 0.000 exon (NM_032781, exon 10 of 15) exon (NM_032781, exon 10 of 15) -7431 NM_173588 283284 Hs.434152 NM_173588 ENSG00000179057 IGSF22 IGFN2 immunoglobulin superfamily member 22 protein-coding chrX-4345 chrX 47645309 47645519 + 6.36 0.000 intron (NM_005229, intron 1 of 5) MIR|SINE|MIR 5190 NM_001114123 2002 Hs.181128 NM_005229 ENSG00000126767 ELK1 - ETS transcription factor ELK1 protein-coding chr17-7167 chr17 79316961 79317171 + 6.36 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 199082 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr6-6343 chr6 55377801 55378011 + 6.36 0.000 intron (NM_207410, intron 6 of 8) LTR16E2|LTR|ERVL 50437 NM_207410 389400 Hs.526967 NM_207410 ENSG00000187871 GFRAL C6orf144|GRAL|UNQ9356|bA360D14.1 GDNF family receptor alpha like protein-coding chr7-4160 chr7 100711920 100712130 + 6.36 0.000 Intergenic AluSx1|SINE|Alu 5904 NM_005837 10248 Hs.416994 NM_005837 ENSG00000172336 POP7 0610037N12Rik|RPP2|RPP20 POP7 homolog, ribonuclease P/MRP subunit protein-coding chr2-14180 chr2 206457234 206457444 + 6.36 0.000 intron (NM_003812, intron 2 of 25) intron (NM_003812, intron 2 of 25) 13807 NM_003812 8745 Hs.370287 NM_003812 ENSG00000114948 ADAM23 MDC-3|MDC3 ADAM metallopeptidase domain 23 protein-coding chr15-5165 chr15 92384664 92384874 + 6.36 0.000 Intergenic Intergenic -9112 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr8-5687 chr8 123385851 123386061 + 6.36 0.000 intron (NM_014109, intron 1 of 27) L1MB3|LINE|L1 10491 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr5-6318 chr5 129085207 129085417 + 6.36 0.000 Intergenic L2b|LINE|L2 -9437 NM_016048 51015 Hs.483296 NM_016048 ENSG00000066583 ISOC1 CGI-111 isochorismatase domain containing 1 protein-coding chr14-2481 chr14 97834281 97834491 + 6.36 0.000 Intergenic AluSz|SINE|Alu -71555 NR_146447 100132612 Hs.587781 NR_146447 ENSG00000258869 LINC02312 - long intergenic non-protein coding RNA 2312 ncRNA chr15-2278 chr15 56383790 56384000 + 6.36 0.000 intron (NM_198524, intron 3 of 12) intron (NM_198524, intron 3 of 12) 18471 NM_001286449 374618 Hs.511476 NM_198524 ENSG00000151575 TEX9 - testis expressed 9 protein-coding chr1-14836 chr1 75985972 75986182 + 6.36 0.000 Intergenic L1M5|LINE|L1 -25247 NR_125939 101927342 Hs.216363 NR_125939 LOC101927342 - uncharacterized LOC101927342 ncRNA chr15-4403 chr15 43636506 43636716 + 6.36 0.000 intron (NM_172095, intron 7 of 12) AluSx|SINE|Alu 11452 NR_110319 117155 Hs.657395 NM_054020 ENSG00000166762 CATSPER2 - cation channel sperm associated 2 protein-coding chr13-2629 chr13 77767244 77767454 + 6.36 0.000 Intergenic MSTB|LTR|ERVL-MaLR 26130 NM_001366666 122060 Hs.349955 NM_144595 ENSG00000139737 SLAIN1 C13orf32 SLAIN motif family member 1 protein-coding chr20-4253 chr20 48899645 48899855 + 6.36 0.000 Intergenic AluSz6|SINE|Alu -21961 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr8-4143 chr8 75047626 75047836 + 6.36 0.000 Intergenic HERVK9-int|LTR|ERVK 47576 NM_001286778 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr19-6844 chr19 42545977 42546187 + 6.36 0.000 intron (NR_073180, intron 2 of 2) L2b|LINE|L2 -17601 NM_001184816 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr10-5801 chr10 107915825 107916035 + 6.36 0.000 intron (NR_125760, intron 4 of 4) intron (NR_125760, intron 4 of 4) 153363 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr12-3886 chr12 117230351 117230561 + 6.36 0.000 intron (NM_001204213, intron 21 of 27) HAL1|LINE|L1 -39986 NM_015002 23014 Hs.740376 NM_015002 ENSG00000135108 FBXO21 FBX21 F-box protein 21 protein-coding chr3-10844 chr3 165999729 165999939 + 6.36 0.000 Intergenic HERVL-int|LTR|ERVL -162411 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr9-7872 chr9 86943735 86943945 + 6.36 0.000 TTS (NM_002048) TTS (NM_002048) 3666 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr9-7561 chr9 35560592 35560802 + 6.36 0.000 exon (NM_001135999, exon 10 of 12) exon (NM_001135999, exon 10 of 12) 3181 NM_001287239 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr1-8739 chr1 240152700 240152910 + 6.36 0.000 intron (NM_020066, intron 2 of 17) intron (NM_020066, intron 2 of 17) 60922 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr5-8071 chr5 95082135 95082345 + 6.36 0.000 promoter-TSS (NM_001002796) promoter-TSS (NM_001002796) -374 NM_001297777 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr8-5121 chr8 67190454 67190664 + 6.36 0.000 intron (NM_001363133, intron 25 of 27) L1MB7|LINE|L1 106711 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr11-10142 chr11 90730081 90730291 + 6.36 0.000 intron (NR_104190, intron 3 of 6) L2|LINE|L2 139016 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr7-6848 chr7 46524239 46524449 + 6.36 0.000 Intergenic MER41-int|LTR|ERV1 172778 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chrX-4885 chrX 106957932 106958142 + 6.36 0.000 intron (NM_001085354, intron 11 of 16) L2b|LINE|L2 37635 NM_020384 9075 Hs.522746 NM_020384 ENSG00000165376 CLDN2 - claudin 2 protein-coding chr14-4416 chr14 31329490 31329700 + 6.36 0.000 intron (NM_015473, intron 22 of 35) THE1C-int|LTR|ERVL-MaLR 90955 NM_015473 25938 Hs.744979 NM_015473 ENSG00000129493 HEATR5A C14orf125 HEAT repeat containing 5A protein-coding chr14-5296 chr14 100910646 100910856 + 6.36 0.000 promoter-TSS (NR_029863) promoter-TSS (NR_029863) -388 NR_029863 442915 NR_029863 ENSG00000199005 MIR370 MIRN370|hsa-mir-370|mir-370 microRNA 370 ncRNA chr8-7359 chr8 136184883 136185093 + 6.36 0.000 Intergenic Intergenic -345810 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr11-5292 chr11 42955100 42955310 + 6.36 0.000 Intergenic Intergenic 314164 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo chr18-2559 chr18 5602482 5602692 + 6.36 0.000 intron (NM_001281535, intron 3 of 21) AluJr|SINE|Alu 26404 NM_001281535 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr1-16315 chr1 216775698 216775908 + 6.36 0.000 intron (NM_001243513, intron 1 of 7) AluJb|SINE|Alu 29582 NM_001243514 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr5-8012 chr5 87627512 87627722 + 6.36 0.000 Intergenic Intergenic -34425 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr7-8180 chr7 30721070 30721280 + 6.36 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -21072 NM_001202475 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr9-4555 chr9 86946292 86946502 + 6.36 0.000 exon (NM_002048, exon 1 of 1) exon (NM_002048, exon 1 of 1) 1109 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr18-2809 chr18 4294303 4294513 + 6.36 0.000 non-coding (NR_036489, exon 3 of 3) non-coding (NR_036489, exon 3 of 3) 29806 NR_036489 284215 Hs.647594 NR_036489 ENSG00000261520 DLGAP1-AS5 - DLGAP1 antisense RNA 5 ncRNA chr6-4752 chr6 70722256 70722466 + 6.36 0.000 intron (NM_001281440, intron 1 of 10) intron (NM_001281440, intron 1 of 10) 53831 NM_001281440 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr6-7331 chr6 45860781 45860991 + 6.36 0.000 Intergenic Intergenic 76711 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr8-2846 chr8 131001265 131001475 + 6.36 0.000 intron (NM_001115, intron 1 of 17) MIRb|SINE|MIR 39539 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr19-4984 chr19 46508909 46509119 + 6.36 0.000 intron (NM_001205281, intron 3 of 3) AluJb|SINE|Alu -13147 NM_020709 57469 Hs.7193 NM_020709 ENSG00000204851 PNMA8B PNMAL2 PNMA family member 8B protein-coding chr4-4748 chr4 95379286 95379496 + 6.36 0.000 intron (NM_003728, intron 1 of 15) intron (NM_003728, intron 1 of 15) 169582 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr2-10513 chr2 230080644 230080854 + 6.36 0.000 Intergenic Intergenic -11825 NM_152527 151473 Hs.504317 NM_152527 ENSG00000163053 SLC16A14 MCT14 solute carrier family 16 member 14 protein-coding chr17-6397 chr17 82832468 82832678 + 6.36 0.000 5' UTR (NM_024702, exon 2 of 3) 5' UTR (NM_024702, exon 2 of 3) 7449 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr10-7105 chr10 96471024 96471234 + 6.36 0.000 intron (NM_012465, intron 2 of 20) AluSz|SINE|Alu 42797 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr2-11483 chr2 233453085 233453295 + 6.36 0.000 intron (NM_152879, intron 18 of 29) intron (NM_152879, intron 18 of 29) 65036 NM_003648 8527 Hs.471675 NM_003648 ENSG00000077044 DGKD DGKdelta|dgkd-2 diacylglycerol kinase delta protein-coding chr9-7778 chr9 77975069 77975279 + 6.36 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 56637 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr9-2531 chr9 124454921 124455131 + 6.36 0.000 Intergenic Intergenic -39584 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr3-9682 chr3 64223322 64223532 + 6.36 0.000 intron (NM_001370528, intron 1 of 7) intron (NM_001370528, intron 1 of 7) 2039 NM_198859 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr4-6739 chr4 4888734 4888944 + 6.36 0.000 Intergenic Intergenic 29174 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr18-1380 chr18 46658277 46658487 + 6.36 0.000 Intergenic Intergenic -1349 NM_144612 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr10-6158 chr10 844771 844981 + 6.36 0.000 intron (NM_001351277, intron 6 of 17) intron (NM_001351277, intron 6 of 17) 86829 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr17-8017 chr17 49919727 49919937 + 6.36 0.000 Intergenic Intergenic -49358 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chrX-931 chrX 27036371 27036581 + 6.36 0.000 Intergenic HAL1|LINE|L1 426865 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr19-2986 chr19 33821093 33821303 + 6.36 0.000 Intergenic Intergenic 24328 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr21-1657 chr21 26072967 26073177 + 6.36 0.000 intron (NM_001136131, intron 3 of 15) L2|LINE|L2 67318 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr1-16554 chr1 233798758 233798968 + 6.36 0.000 Intergenic MER11B|LTR|ERVK -105813 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr7-6128 chr7 122848251 122848461 + 6.36 0.000 intron (NM_001167940, intron 1 of 29) intron (NM_001167940, intron 1 of 29) 38104 NM_001363390 93664 Hs.649459 NM_017954 ENSG00000081803 CADPS2 CAPS2 calcium dependent secretion activator 2 protein-coding chr20-2162 chr20 42549160 42549370 + 6.36 0.000 intron (NM_133170, intron 7 of 31) intron (NM_133170, intron 7 of 31) -136218 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr7-8796 chr7 82408442 82408652 + 6.36 0.000 intron (NM_000722, intron 1 of 38) MIRc|SINE|MIR 35230 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr19-5458 chr19 33684299 33684509 + 6.36 0.000 promoter-TSS (NM_022467) promoter-TSS (NM_022467) -124 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr10-7735 chr10 32397193 32397403 + 6.36 0.000 Intergenic AluJo|SINE|Alu -18529 NM_001282391 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr5-2837 chr5 58833349 58833559 + 6.36 0.000 intron (NM_138453, intron 4 of 4) MER5B|DNA|hAT-Charlie 166444 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr8-2304 chr8 134479816 134480026 + 6.36 0.000 intron (NM_001174158, intron 13 of 13) intron (NM_001174158, intron 13 of 13) -118150 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr7-6301 chr7 139732198 139732408 + 6.36 0.000 intron (NM_001113239, intron 1 of 14) MamRTE1|LINE|RTE-BovB 45695 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr1-14792 chr1 71086547 71086757 + 6.36 0.000 intron (NR_046217, intron 1 of 3) FordPrefect|DNA|hAT-Tip100 5328 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr3-10536 chr3 139526955 139527165 + 6.36 0.000 3' UTR (NM_001130992, exon 3 of 3) 3' UTR (NM_001130992, exon 3 of 3) 12576 NM_001365940 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr5-6265 chr5 98570872 98571082 + 6.36 0.000 Intergenic Intergenic -197655 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr9-4466 chr9 28393605 28393815 + 6.36 0.000 intron (NM_152570, intron 3 of 6) LTR16C|LTR|ERVL 325595 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr5-2947 chr5 150284326 150284536 + 6.36 0.000 intron (NM_001369025, intron 1 of 17) intron (NM_001369025, intron 1 of 17) 5342 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chr6-5427 chr6 156981084 156981294 + 6.36 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -55238 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr2-9157 chr2 211806402 211806612 + 6.36 0.000 intron (NM_001042599, intron 3 of 26) HAL1|LINE|L1 619853 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr4-8135 chr4 127328011 127328221 + 6.36 0.000 Intergenic Intergenic -304841 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr4-3760 chr4 87213574 87213784 + 6.36 0.000 intron (NM_001292006, intron 1 of 9) MER58B|DNA|hAT-Charlie 6589 NM_001292003 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr20-2519 chr20 34547056 34547266 + 6.36 0.000 intron (NM_181509, intron 1 of 4) intron (NM_181509, intron 1 of 4) 317 NM_181509 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr16-6148 chr16 23064745 23064955 + 6.36 0.000 3' UTR (NM_020718, exon 16 of 16) 3' UTR (NM_020718, exon 16 of 16) 84420 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr6-7644 chr6 81241386 81241596 + 6.36 0.000 Intergenic Intergenic 511190 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr12-8264 chr12 124871601 124871811 + 6.36 0.000 Intergenic Intergenic -7842 NR_160423 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr8-6237 chr8 38806029 38806239 + 6.36 0.000 intron (NM_001352791, intron 1 of 11) intron (NM_001352791, intron 1 of 11) 684 NM_001352791 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr5-8438 chr5 128791165 128791375 + 6.36 0.000 Intergenic L1MD1|LINE|L1 -173857 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr10-8833 chr10 110217389 110217599 + 6.36 0.000 intron (NM_001008541, intron 1 of 4) intron (NM_001008541, intron 1 of 4) 7263 NM_001008541 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr11-10761 chr11 134568907 134569117 + 6.36 0.000 Intergenic Intergenic 132530 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA chr15-4027 chr15 60642207 60642417 + 6.36 0.000 intron (NM_134261, intron 2 of 10) L3|LINE|CR1 -14782 NM_002943 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr11-8805 chr11 11396932 11397142 + 6.36 0.000 intron (NM_001363464, intron 3 of 9) intron (NM_001363464, intron 3 of 9) -43787 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr10-6810 chr10 14988311 14988521 + 6.36 0.000 TTS (NR_147060) TTS (NR_147060) 29028 NM_001080836 644890 Hs.257249 NM_001080836 ENSG00000197889 MEIG1 SPATA39|bA2K17.3 meiosis/spermiogenesis associated 1 protein-coding chr6-3800 chr6 26514193 26514403 + 6.36 0.000 Intergenic Intergenic -7408 NR_026790 493812 Hs.272939 NR_026790 ENSG00000228223 HCG11 CTA-14H9.3|bK14H9.3 HLA complex group 11 ncRNA chr12-6242 chr12 39753286 39753496 + 6.36 0.000 intron (NR_135051, intron 14 of 18) intron (NR_135051, intron 14 of 18) 127208 NR_135051 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding chr9-5083 chr9 34475227 34475437 + 6.36 0.000 intron (NM_001281428, intron 1 of 19) intron (NM_001281428, intron 1 of 19) 16527 NM_012144 27019 Hs.112667 NM_012144 ENSG00000122735 DNAI1 CILD1|DIC1|ICS1|PCD dynein axonemal intermediate chain 1 protein-coding chr11-7108 chr11 123238389 123238599 + 6.36 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -43246 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr11-10667 chr11 127631469 127631679 + 6.36 0.000 Intergenic Intergenic 360504 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr18-2498 chr18 57019759 57019969 + 6.36 0.000 intron (NM_015285, intron 26 of 27) intron (NM_015285, intron 26 of 27) 52255 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr10-9110 chr10 126801224 126801434 + 6.36 0.000 Intergenic L1PB4|LINE|L1 -104080 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr4-4628 chr4 79822199 79822409 + 6.36 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -5167 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr5-8279 chr5 113128129 113128339 + 6.36 0.000 intron (NM_001085377, intron 5 of 18) intron (NM_001085377, intron 5 of 18) 151436 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr18-1164 chr18 12874345 12874555 + 6.36 0.000 intron (NM_080423, intron 1 of 8) SVA_D|Retroposon|SVA 9787 NM_002828 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase non-receptor type 2 protein-coding chr17-8352 chr17 73884352 73884562 + 6.36 0.000 Intergenic L2a|LINE|L2 -55920 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr11-8394 chr11 94092690 94092900 + 6.36 0.000 intron (NM_001098672, intron 12 of 19) Tigger17a|DNA|TcMar-Tigger -36046 NM_015368 24145 Hs.591976 NM_015368 ENSG00000110218 PANX1 MRS1|PX1|UNQ2529 pannexin 1 protein-coding chr3-10441 chr3 132505306 132505516 + 6.36 0.000 exon (NM_015268, exon 42 of 56) exon (NM_015268, exon 42 of 56) 87909 NM_015268 23317 Hs.12707 NM_015268 ENSG00000138246 DNAJC13 PARK21|RME8 DnaJ heat shock protein family (Hsp40) member C13 protein-coding chr7-8290 chr7 39251768 39251978 + 6.36 0.000 intron (NM_001370959, intron 4 of 9) intron (NM_001370959, intron 4 of 9) 77261 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr6-8254 chr6 138149904 138150114 + 6.36 0.000 Intergenic Intergenic -11930 NM_020340 57221 Hs.194408 NM_020340 ENSG00000112379 ARFGEF3 A7322|BIG3|C6orf92|KIAA1244|PPP1R33|dJ171N11.1 ARFGEF family member 3 protein-coding chr2-5651 chr2 196068635 196068845 + 6.36 0.000 promoter-TSS (NM_018897) promoter-TSS (NM_018897) 97 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr6-5792 chr6 6758290 6758500 + 6.36 0.000 Intergenic AluJo|SINE|Alu -135569 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr2-12896 chr2 98996282 98996492 + 6.36 0.000 TTS (NM_025244) TTS (NM_025244) -60162 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr5-5695 chr5 164015649 164015859 + 6.36 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 451648 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr14-4546 chr14 43417404 43417614 + 6.36 0.000 Intergenic L1PA10|LINE|L1 1089774 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr8-2984 chr8 97060538 97060748 + 6.36 0.000 intron (NM_016134, intron 6 of 7) intron (NM_016134, intron 6 of 7) 217285 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr20-3167 chr20 42049681 42049891 + 6.36 0.000 Intergenic Intergenic -431409 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr1-13138 chr1 201325405 201325615 + 6.36 0.000 intron (NM_001005337, intron 11 of 13) intron (NM_001005337, intron 11 of 13) 42004 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr11-9192 chr11 36656475 36656685 + 6.36 0.000 intron (NR_077243, intron 4 of 4) intron (NR_077243, intron 4 of 4) -58301 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr1-8894 chr1 5980287 5980497 + 6.36 0.000 intron (NR_111987, intron 2 of 32) L2a|LINE|L2 12033 NM_001291593 261734 Hs.462348 NM_015102 ENSG00000131697 NPHP4 POC10|SLSN4 nephrocystin 4 protein-coding chr2-12301 chr2 46891685 46891895 + 6.36 0.000 Intergenic Intergenic 24016 NM_001171509 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr1-10808 chr1 202835699 202835909 + 6.36 0.000 Intergenic Intergenic 15547 NR_038135 641515 Hs.23459 NR_038135 ENSG00000184774 MGAT4EP - MGAT4 family member E, pseudogene pseudo chr1-16725 chr1 248927262 248927472 + 6.36 0.000 Intergenic Intergenic 21124 NM_001017434 267002 Hs.602037 NM_170725 ENSG00000185220 PGBD2 - piggyBac transposable element derived 2 protein-coding chr3-5603 chr3 9111954 9112164 + 6.36 0.000 intron (NM_014850, intron 2 of 21) intron (NM_014850, intron 2 of 21) -80434 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr10-5390 chr10 74683731 74683941 + 6.36 0.000 intron (NM_001369124, intron 9 of 9) intron (NM_001369124, intron 9 of 9) -141419 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr17-8106 chr17 56989934 56990144 + 6.36 0.000 intron (NM_021626, intron 5 of 12) FLAM_C|SINE|Alu 11932 NM_021626 59342 Hs.514950 NM_021626 ENSG00000121064 SCPEP1 HSCP1|RISC serine carboxypeptidase 1 protein-coding chr12-3814 chr12 68897758 68897968 + 6.36 0.000 intron (NM_001874, intron 2 of 8) intron (NM_001874, intron 2 of 8) 35308 NM_198320 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr15-2736 chr15 99014991 99015201 + 6.36 0.000 intron (NR_126487, intron 1 of 3) CpG 392 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 - leukemia-associated non-coding IGF1R activator RNA 1 ncRNA chr4-7246 chr4 46463900 46464110 + 6.36 0.000 Intergenic L1PA4|LINE|L1 -73877 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr11-6477 chr11 67757620 67757830 + 6.36 0.000 Intergenic Intergenic 47611 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr14-3295 chr14 84709043 84709253 + 6.36 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -562784 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr4-8574 chr4 168129324 168129534 + 6.36 0.000 intron (NM_007193, intron 2 of 11) intron (NM_007193, intron 2 of 11) 36892 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr16-4027 chr16 963191 963401 + 6.36 0.000 intron (NM_001352017, intron 1 of 11) intron (NM_001352017, intron 1 of 11) 7688 NM_001352021 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr3-11117 chr3 186397607 186397817 + 6.36 0.000 Intergenic MIRc|SINE|MIR -35478 NM_001080744 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr8-3280 chr8 20222840 20223050 + 6.36 0.000 Intergenic Intergenic 25564 NM_001693 526 Hs.295917 NM_001693 ENSG00000147416 ATP6V1B2 ATP6B1B2|ATP6B2|DOOD|HO57|VATB|VPP3|Vma2|ZLS2 ATPase H+ transporting V1 subunit B2 protein-coding chr6-4755 chr6 71039026 71039236 + 6.36 0.000 Intergenic L2c|LINE|L2 -82071 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr3-3741 chr3 196545018 196545228 + 6.36 0.000 Intergenic AluSx|SINE|Alu 23431 NM_001345918 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr19-5828 chr19 41045256 41045466 + 6.36 0.000 Intergenic L2b|LINE|L2 -43090 NM_000766 1553 Hs.567252 NM_000766 ENSG00000197838 CYP2A13 CPAD|CYP2A|CYPIIA13 cytochrome P450 family 2 subfamily A member 13 protein-coding chr4-3461 chr4 106695965 106696175 + 6.36 0.000 Intergenic Intergenic 262446 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA chr3-5140 chr3 53604147 53604357 + 6.36 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 109641 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr10-8209 chr10 72697784 72697994 + 6.36 0.000 intron (NM_001270680, intron 1 of 7) AluJr|SINE|Alu 5270 NM_001270680 90550 Hs.591366 NM_138357 ENSG00000156026 MCU C10orf42|CCDC109A|HsMCU mitochondrial calcium uniporter protein-coding chr11-8456 chr11 115548397 115548607 + 6.36 0.000 Intergenic Intergenic -44087 NM_014333 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr4-4569 chr4 74848462 74848672 + 6.36 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -54044 NM_001316963 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr2-10818 chr2 51046572 51046782 + 6.36 0.000 intron (NR_135237, intron 1 of 10) intron (NR_135237, intron 1 of 10) 14076 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr2-6075 chr2 159755792 159756002 + 6.36 0.000 intron (NM_001282805, intron 8 of 11) intron (NM_001282805, intron 8 of 11) 21933 NM_001282807 64844 Hs.529272 NM_022826 ENSG00000136536 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane associated ring-CH-type finger 7 protein-coding chr8-6607 chr8 74012323 74012533 + 6.36 0.000 intron (NM_001195797, intron 2 of 3) L1PB4|LINE|L1 21036 NM_015364 23643 Hs.726603 NM_015364 ENSG00000154589 LY96 ESOP-1|MD-2|MD2|ly-96 lymphocyte antigen 96 protein-coding chr1-14731 chr1 66445462 66445672 + 6.36 0.000 Intergenic Intergenic -88026 NM_001308203 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr1-15554 chr1 158506681 158506891 + 6.36 0.000 Intergenic L1M1|LINE|L1 26908 NM_001004472 343406 Hs.451913 NM_001004472 ENSG00000198965 OR10R2 OR1-8|OR10R2Q olfactory receptor family 10 subfamily R member 2 protein-coding chr19-6438 chr19 15940851 15941061 + 6.36 0.000 Intergenic Intergenic -6090 NM_021187 57834 Hs.187393 NM_021187 ENSG00000171903 CYP4F11 CYPIVF11 cytochrome P450 family 4 subfamily F member 11 protein-coding chr9-8730 chr9 132372731 132372941 + 6.36 0.000 Intergenic L2a|LINE|L2 -17850 NM_015046 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr3-9922 chr3 87187287 87187497 + 6.36 0.000 Intergenic Intergenic 38885 NR_039958 100616161 NR_039958 ENSG00000264119 MIR4795 - microRNA 4795 ncRNA chrX-2538 chrX 99160829 99161039 + 6.36 0.000 Intergenic HERVH-int|LTR|ERV1 1249339 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr18-2339 chr18 21253053 21253263 + 6.36 0.000 intron (NM_001142966, intron 1 of 32) MIRc|SINE|MIR 10916 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr16-5997 chr16 7352861 7353071 + 6.36 0.000 intron (NM_145893, intron 1 of 13) AluJb|SINE|Alu 20121 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr22-3407 chr22 36658115 36658325 + 6.36 0.000 intron (NM_006078, intron 1 of 3) CR1_Mam|LINE|CR1 44638 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr14-2609 chr14 57485599 57485809 + 6.36 0.000 intron (NM_001283060, intron 2 of 5) intron (NM_001283060, intron 2 of 5) 8153 NM_001283060 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chrX-4916 chrX 109113184 109113394 + 6.36 0.000 Intergenic Intergenic 368797 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chrX-3172 chrX 33631171 33631381 + 6.36 0.000 Intergenic L1M2|LINE|L1 -291888 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr17-8514 chr17 79138462 79138672 + 6.36 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 63630 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr4-7704 chr4 89136780 89136990 + 6.36 0.000 Intergenic Charlie6|DNA|hAT-Charlie 24068 NM_145715 166815 Hs.58924 NM_145715 ENSG00000180346 TIGD2 HEL106 tigger transposable element derived 2 protein-coding chr4-6424 chr4 131302353 131302563 + 6.36 0.000 Intergenic L1PB4|LINE|L1 -462380 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr10-3611 chr10 93252292 93252502 + 6.36 0.000 Intergenic MIRc|SINE|MIR 178504 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr18-3152 chr18 41382939 41383149 + 6.36 0.000 Intergenic Intergenic 137633 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr13-2955 chr13 46047842 46048052 + 6.36 0.000 intron (NM_001330565, intron 1 of 18) intron (NM_001330565, intron 1 of 18) 4799 NM_001076788 23091 Hs.136102 NM_015070 ENSG00000123200 ZC3H13 KIAA0853|Xio zinc finger CCCH-type containing 13 protein-coding chr1-9004 chr1 10853602 10853812 + 6.36 0.000 Intergenic Intergenic -57061 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chrX-2066 chrX 19609355 19609565 + 6.36 0.000 intron (NM_001024666, intron 7 of 16) intron (NM_001024666, intron 7 of 16) 61539 NM_001353897 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr11-9038 chr11 26914555 26914765 + 6.36 0.000 Intergenic Intergenic -79452 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr3-6895 chr3 156209006 156209216 + 6.36 0.000 intron (NM_003471, intron 1 of 13) L2c|LINE|L2 18772 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr3-10935 chr3 174248119 174248329 + 6.36 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -327428 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr2-10640 chr2 16042233 16042443 + 6.36 0.000 Intergenic L2c|LINE|L2 -8089 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA chr3-5430 chr3 171384278 171384488 + 6.36 0.000 intron (NM_001161563, intron 1 of 31) MER5A1|DNA|hAT-Charlie 76022 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr5-9094 chr5 172533919 172534129 + 6.36 0.000 Intergenic Intergenic 24990 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr12-3183 chr12 51907061 51907271 + 6.36 0.000 promoter-TSS (NM_000020) promoter-TSS (NM_000020) -252 NM_000020 94 Hs.591026 NM_000020 ENSG00000139567 ACVRL1 ACVRLK1|ALK-1|ALK1|HHT|HHT2|ORW2|SKR3|TSR-I activin A receptor like type 1 protein-coding chr10-8793 chr10 106960578 106960788 + 6.36 0.000 intron (NM_001206569, intron 1 of 25) AluSc|SINE|Alu 204023 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr3-8277 chr3 53212483 53212693 + 6.36 0.000 Intergenic L1MB3|LINE|L1 43434 NM_001064 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr5-6342 chr5 135399050 135399260 + 6.36 0.000 promoter-TSS (NM_001040158) promoter-TSS (NM_001040158) 83 NM_138609 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr8-7381 chr8 138686809 138687019 + 6.36 0.000 intron (NM_152888, intron 37 of 64) intron (NM_152888, intron 37 of 64) -189184 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr5-6856 chr5 118577616 118577826 + 6.36 0.000 Intergenic Intergenic -15604 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chr12-8221 chr12 123803529 123803739 + 6.36 0.000 intron (NM_207437, intron 15 of 77) intron (NM_207437, intron 15 of 77) 41139 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr1-16624 chr1 239381855 239382065 + 6.36 0.000 Intergenic L1MEg|LINE|L1 -4608 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr2-14524 chr2 228973504 228973714 + 6.36 0.000 Intergenic L1MC3|LINE|L1 258483 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr10-7280 chr10 129955989 129956199 + 6.36 0.000 intron (NM_001005463, intron 6 of 15) intron (NM_001005463, intron 6 of 15) 8180 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr8-5958 chr8 20417404 20417614 + 6.36 0.000 Intergenic Intergenic -113546 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr13-4270 chr13 97726199 97726409 + 6.36 0.000 Intergenic MLT2A2|LTR|ERVL -227371 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr9-8467 chr9 123479561 123479771 + 6.36 0.000 intron (NM_001352968, intron 12 of 18) intron (NM_001352968, intron 12 of 18) 5956 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr6-6371 chr6 70369297 70369507 + 6.36 0.000 Intergenic Intergenic -24800 NR_125857 101928353 NR_125857 EVADR - uncharacterized LOC101928353 ncRNA chr20-4218 chr20 47662014 47662224 + 6.36 0.000 intron (NM_198596, intron 17 of 20) intron (NM_198596, intron 17 of 20) 123945 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr22-3973 chr22 38129365 38129575 + 6.36 0.000 exon (NM_003560, exon 8 of 17) exon (NM_003560, exon 8 of 17) -18786 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr2-13279 chr2 128039550 128039760 + 6.36 0.000 Intergenic HERVI-int|LTR|ERV1 -11596 NM_001330302 79595 Hs.32995 NM_024545 ENSG00000136715 SAP130 - Sin3A associated protein 130 protein-coding chr8-4591 chr8 130032812 130033022 + 6.36 0.000 Intergenic AluJo|SINE|Alu -15788 NM_001353245 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr11-8845 chr11 12762328 12762538 + 6.36 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 88012 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr1-10460 chr1 161285118 161285328 + 6.36 0.000 3' UTR (NM_001102566, exon 3 of 3) 3' UTR (NM_001102566, exon 3 of 3) 24745 NM_000530 4359 Hs.591486 NM_000530 ENSG00000158887 MPZ CHM|CHN2|CMT1|CMT1B|CMT2I|CMT2J|CMT4E|CMTDI3|CMTDID|DSS|HMSNIB|MPP|P0 myelin protein zero protein-coding chr3-5673 chr3 12974942 12975152 + 6.36 0.000 intron (NM_001134382, intron 1 of 13) MIRb|SINE|MIR -7317 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chrX-1850 chrX 111055117 111055327 + 6.36 0.000 intron (NM_001128166, intron 2 of 15) intron (NM_001128166, intron 2 of 15) -40969 NM_001324326 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr3-5993 chr3 48320409 48320619 + 6.36 0.000 intron (NM_001080525, intron 2 of 4) AluSx4|SINE|Alu -4055 NR_031749 100313840 NR_031749 ENSG00000252466 MIR2115 - microRNA 2115 ncRNA chr10-7557 chr10 15755265 15755475 + 6.36 0.000 Intergenic Intergenic -35035 NM_001291494 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr15-5267 chr15 99041434 99041644 + 6.36 0.000 Intergenic HAL1M8|LINE|L1 26835 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 - leukemia-associated non-coding IGF1R activator RNA 1 ncRNA chr8-5997 chr8 22357295 22357505 + 6.36 0.000 TTS (NM_001135721) TTS (NM_001135721) -9878 NM_015359 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr2-13211 chr2 122240305 122240515 + 6.36 0.000 Intergenic Intergenic 484759 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr18-2546 chr18 2096418 2096628 + 6.36 0.000 Intergenic Intergenic 474982 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr1-4804 chr1 20175775 20175985 + 6.36 0.000 intron (NM_001316722, intron 1 of 4) intron (NM_001316722, intron 1 of 4) 1559 NM_001367969 391013 Hs.512512 NM_001105572 ENSG00000187980 PLA2G2C - phospholipase A2 group IIC protein-coding chr1-10908 chr1 208484875 208485085 + 6.36 0.000 Intergenic Intergenic -240596 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr4-5612 chr4 2456827 2457037 + 6.36 0.000 intron (NM_001193282, intron 11 of 15) intron (NM_001193282, intron 11 of 15) -12174 NM_001185010 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr2-11001 chr2 101617938 101618148 + 6.36 0.000 Intergenic Intergenic -79660 NM_145686 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr2-10502 chr2 225995834 225996044 + 6.36 0.000 Intergenic Intergenic -146855 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr20-2565 chr20 36779263 36779473 + 6.36 0.000 3' UTR (NM_080627, exon 15 of 15) 3' UTR (NM_080627, exon 15 of 15) -5605 NM_001145318 79980 Hs.632268 NM_024918 ENSG00000149636 DSN1 C20orf172|KNL3|MIS13|dJ469A13.2|hKNL-3 DSN1 component of MIS12 kinetochore complex protein-coding chr1-15613 chr1 161885710 161885920 + 6.36 0.000 intron (NM_007348, intron 14 of 15) L2c|LINE|L2 119495 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chr15-4024 chr15 60219890 60220100 + 6.36 0.000 Intergenic Intergenic 177991 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr8-7551 chr8 144615842 144616052 + 6.36 0.000 intron (NM_001308208, intron 1 of 10) intron (NM_001308208, intron 1 of 10) -2444 NM_001308207 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr15-2454 chr15 79156094 79156304 + 6.36 0.000 Intergenic Intergenic -53589 NR_029705 406960 NR_029705 ENSG00000207695 MIR184 EDICT|MIRN184|miR-184 microRNA 184 ncRNA chrX-2236 chrX 45775055 45775265 + 6.36 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -28036 NR_029636 407007 NR_029636 ENSG00000207725 MIR222 MIRN222|miRNA222|mir-222 microRNA 222 ncRNA chr5-4288 chr5 149702463 149702673 + 6.36 0.000 Intergenic AluJo|SINE|Alu -27742 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr11-5795 chr11 5936552 5936762 + 6.36 0.000 Intergenic HERV-Fc1-int|LTR|ERV1 -10690 NM_001003443 390083 Hs.553741 NM_001003443 ENSG00000184478 OR56A3 OR56A2P|OR56A3P|OR56A6 olfactory receptor family 56 subfamily A member 3 protein-coding chr1-11174 chr1 239738319 239738529 + 6.36 0.000 intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) -19305 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA chr9-3041 chr9 130537780 130537990 + 6.36 0.000 Intergenic Intergenic 41609 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr4-3634 chr4 15234724 15234934 + 6.36 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) -105159 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr5-7879 chr5 73454539 73454749 + 6.36 0.000 intron (NR_126410, intron 4 of 4) intron (NR_126410, intron 4 of 4) -5867 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chrX-3956 chrX 11724336 11724546 + 6.36 0.000 Intergenic Intergenic -33718 NM_078628 10943 Hs.655288 NM_006800 ENSG00000005302 MSL3 MSL3L1 MSL complex subunit 3 protein-coding chr10-8083 chr10 67864401 67864611 + 6.36 0.000 Intergenic AluSp|SINE|Alu -20150 NM_012238 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr2-14533 chr2 229653050 229653260 + 6.36 0.000 intron (NM_139072, intron 1 of 12) intron (NM_139072, intron 1 of 12) 61400 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr18-2649 chr18 46069888 46070098 + 6.36 0.000 intron (NM_024430, intron 1 of 14) MIR|SINE|MIR 2267 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr5-2001 chr5 693473 693683 + 6.36 0.000 promoter-TSS (NM_007030) promoter-TSS (NM_007030) -226 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr15-2841 chr15 40736148 40736358 + 6.36 0.000 3' UTR (NM_001323896, exon 13 of 13) 3' UTR (NM_001323896, exon 13 of 13) 19001 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chr13-3923 chr13 58089574 58089784 + 6.36 0.000 Intergenic L1MA7|LINE|L1 -76148 NR_120416 101926897 Hs.640215 NR_120416 ENSG00000277448 LINC02338 - long intergenic non-protein coding RNA 2338 ncRNA chr19-1795 chr19 55354048 55354258 + 6.36 0.000 TTS (NM_001145402) TTS (NM_001145402) 566 NM_001369798 125965 Hs.550544 NM_144613 ENSG00000160471 COX6B2 COXVIB2|CT59 cytochrome c oxidase subunit 6B2 protein-coding chr10-6407 chr10 8017414 8017624 + 6.36 0.000 TTS (NM_031923) TTS (NM_031923) 34972 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 - GATA3 antisense RNA 1 ncRNA chr11-6639 chr11 75169236 75169446 + 6.36 0.000 exon (NM_001145212, exon 2 of 11) exon (NM_001145212, exon 2 of 11) 9509 NM_001145211 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr3-10481 chr3 134893468 134893678 + 6.36 0.000 intron (NM_004441, intron 1 of 15) L2b|LINE|L2 98313 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr8-7446 chr8 141091805 141092015 + 6.36 0.000 Intergenic MER83|LTR|ERV1 -36679 NM_001352890 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr17-8134 chr17 58371624 58371834 + 6.36 0.000 intron (NM_001305544, intron 2 of 9) intron (NM_001305544, intron 2 of 9) -19528 NR_073470 6827 Hs.439481 NM_003168 ENSG00000213246 SUPT4H1 SPT4|SPT4H|SUPT4H|Supt4a SPT4 homolog, DSIF elongation factor subunit protein-coding chr22-3031 chr22 29850194 29850404 + 6.36 0.000 Intergenic Intergenic -12025 NM_001369922 84164 Hs.731754 NM_032204 ENSG00000100325 ASCC2 ASC1p100|p100 activating signal cointegrator 1 complex subunit 2 protein-coding chr2-9547 chr2 239579523 239579733 + 6.36 0.000 Intergenic THE1B|LTR|ERVL-MaLR 177880 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr6-6117 chr6 156309426 156309636 + 6.36 0.000 Intergenic Intergenic -69219 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr19-5093 chr19 55321610 55321820 + 6.36 0.000 intron (NR_104066, intron 2 of 6) intron (NR_104066, intron 2 of 6) 3626 NM_001282011 284417 Hs.382625 NM_001085488 ENSG00000180061 TMEM150B DRAM3|TMEM224|TTN2 transmembrane protein 150B protein-coding chr8-6066 chr8 25897932 25898142 + 6.36 0.000 intron (NM_022659, intron 7 of 15) intron (NM_022659, intron 7 of 15) 147376 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr4-3502 chr4 143124434 143124644 + 6.36 0.000 Intergenic LTR16A|LTR|ERVL 60322 NR_136203 105377623 NR_136203 ENSG00000250326 LOC105377623 - uncharacterized LOC105377623 ncRNA chrX-1566 chrX 51471751 51471961 + 6.36 0.000 Intergenic L1MB8|LINE|L1 24736 NM_018159 55190 Hs.200016 NM_018159 ENSG00000196368 NUDT11 APS1|ASP1|DIPP3b|DIPP3beta|hDIPP3beta nudix hydrolase 11 protein-coding chr20-3481 chr20 58420765 58420975 + 6.36 0.000 intron (NM_001195677, intron 2 of 2) intron (NM_001195677, intron 2 of 2) 31641 NM_001195677 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr11-10211 chr11 97624960 97625170 + 6.36 0.000 Intergenic MLT2E|LTR|ERVL 1116640 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr1-5847 chr1 244705374 244705584 + 6.36 0.000 intron (NM_016076, intron 4 of 4) intron (NM_016076, intron 4 of 4) 52353 NM_001297746 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr5-6887 chr5 129052924 129053134 + 6.36 0.000 Intergenic L1MC3|LINE|L1 -41720 NM_016048 51015 Hs.483296 NM_016048 ENSG00000066583 ISOC1 CGI-111 isochorismatase domain containing 1 protein-coding chr5-7994 chr5 84830638 84830848 + 6.36 0.000 Intergenic LTR12C|LTR|ERV1 -445863 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr7-7748 chr7 1188377 1188587 + 6.36 0.000 Intergenic Intergenic 27697 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr1-6589 chr1 36579065 36579275 + 6.36 0.000 Intergenic Intergenic -95856 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chrX-1870 chrX 119538437 119538647 + 6.36 0.000 3' UTR (NM_001170569, exon 7 of 7) 3' UTR (NM_001170569, exon 7 of 7) 26867 NM_001170569 63932 Hs.248572 NM_022101 ENSG00000018610 CXorf56 MRX107 chromosome X open reading frame 56 protein-coding chr19-4702 chr19 18730777 18730987 + 6.36 0.000 intron (NM_015321, intron 1 of 13) intron (NM_015321, intron 1 of 13) 47202 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr5-7949 chr5 80142174 80142384 + 6.36 0.000 3' UTR (NM_001174072, exon 12 of 12) 3' UTR (NM_001174072, exon 12 of 12) -58614 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr6-6347 chr6 56437851 56438061 + 6.36 0.000 Intergenic Intergenic -43828 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr9-7185 chr9 135971081 135971291 + 6.36 0.000 Intergenic Intergenic -9813 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr5-7914 chr5 77328017 77328227 + 6.36 0.000 intron (NM_001029851, intron 3 of 18) intron (NM_001029851, intron 3 of 18) 117442 NM_001029853 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr10-3796 chr10 131513143 131513353 + 6.36 0.000 Intergenic Intergenic -201527 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr6-3568 chr6 57263416 57263626 + 6.36 0.000 promoter-TSS (NR_109774) promoter-TSS (NR_109774) -175 NR_109774 100506188 Hs.485640 NR_109774 LOC100506188 - uncharacterized LOC100506188 ncRNA chr17-6886 chr17 31396924 31397134 + 6.36 0.000 intron (NM_032932, intron 1 of 14) intron (NM_032932, intron 1 of 14) 5354 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr21-729 chr21 37176588 37176798 + 6.36 0.000 intron (NM_003316, intron 35 of 45) MIR|SINE|MIR 17233 NR_046651 100874006 Hs.570411 NR_046651 ENSG00000228677 TTC3-AS1 - TTC3 antisense RNA 1 ncRNA chr2-6123 chr2 218948069 218948279 + 6.36 0.000 Intergenic AluSq2|SINE|Alu -11492 NM_003936 8941 Hs.158460 NM_003936 ENSG00000171450 CDK5R2 NCK5AI|P39|p39nck5ai cyclin dependent kinase 5 regulatory subunit 2 protein-coding chr17-7037 chr17 60693434 60693644 + 6.36 0.000 intron (NM_001330413, intron 4 of 25) AluJb|SINE|Alu 15688 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr14-3669 chr14 92355079 92355289 + 6.36 0.000 intron (NM_153647, intron 3 of 17) L2a|LINE|L2 31376 NM_153646 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr12-4435 chr12 9959956 9960166 + 6.36 0.000 intron (NM_001207010, intron 1 of 6) LOR1-int|LTR|ERV1 -6724 NR_135047 400002 NR_135047 ENSG00000231560 CLEC12A-AS1 - CLEC12A antisense RNA 1 ncRNA chr10-7898 chr10 50133680 50133890 + 6.36 0.000 TTS (NM_001291398) TTS (NM_001291398) 65831 NM_001330102 387680 Hs.365286 NM_018232 ENSG00000099290 WASHC2A FAM21A|FAM21B|bA56A21.1|bA98I6.1 WASH complex subunit 2A protein-coding chr14-4186 chr14 86208011 86208221 + 6.36 0.000 Intergenic AluSx1|SINE|Alu 273438 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr3-9737 chr3 68107715 68107925 + 6.36 0.000 intron (NM_001252216, intron 2 of 4) intron (NM_001252216, intron 2 of 4) 103573 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr20-3894 chr20 31781111 31781321 + 6.36 0.000 intron (NM_012112, intron 10 of 17) intron (NM_012112, intron 10 of 17) -38159 NM_033118 85366 Hs.86092 NM_033118 ENSG00000101306 MYLK2 KMLC|MLCK|MLCK2|skMLCK myosin light chain kinase 2 protein-coding chr12-8311 chr12 128996716 128996926 + 6.36 0.000 Intergenic G-rich|Low_complexity|Low_complexity -112869 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 TMEM132D-AS1 - TMEM132D antisense RNA 1 ncRNA chr3-7474 chr3 140477312 140477522 + 6.36 0.000 intron (NM_022131, intron 8 of 16) intron (NM_022131, intron 8 of 16) 31372 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr7-3044 chr7 120889403 120889613 + 6.36 0.000 Intergenic HERVH-int|LTR|ERV1 -31364 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr11-10127 chr11 88586788 88586998 + 6.36 0.000 intron (NM_001143831, intron 6 of 8) L2a|LINE|L2 82317 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr7-6369 chr7 150952782 150952992 + 6.36 0.000 intron (NM_172056, intron 5 of 8) intron (NM_172056, intron 5 of 8) 2917 NM_001204798 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chr14-3356 chr14 90898551 90898761 + 6.36 0.000 intron (NM_182398, intron 12 of 12) intron (NM_182398, intron 12 of 12) -82226 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr18-3433 chr18 64687821 64688031 + 6.36 0.000 Intergenic LTR8|LTR|ERV1 -427871 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr10-7960 chr10 56524214 56524424 + 6.36 0.000 Intergenic Intergenic -163046 NM_001005413 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr1-14867 chr1 79892697 79892907 + 6.36 0.000 Intergenic L1PA3|LINE|L1 -642953 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr17-8579 chr17 80244054 80244264 + 6.36 0.000 intron (NM_001166348, intron 9 of 16) intron (NM_001166348, intron 9 of 16) -16693 NM_001256071 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr5-2209 chr5 172959481 172959691 + 6.36 0.000 promoter-TSS (NR_026683) promoter-TSS (NR_026683) 126 NM_001317982 51121 Hs.546390 NM_016093 ENSG00000037241 RPL26L1 RPL26P1 ribosomal protein L26 like 1 protein-coding chr5-4116 chr5 76141491 76141701 + 6.36 0.000 intron (NM_014979, intron 2 of 12) AluSz|SINE|Alu 58213 NM_014979 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr10-4556 chr10 101534221 101534431 + 6.36 0.000 intron (NM_001256856, intron 8 of 13) intron (NM_001256856, intron 8 of 13) 53931 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr6-4305 chr6 15114608 15114818 + 6.36 0.000 Intergenic (AAAAT)n|Simple_repeat|Simple_repeat -131356 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr7-7911 chr7 7047522 7047732 + 6.36 0.000 Intergenic MER106A|DNA|hAT-Charlie 19418 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr22-1885 chr22 44277449 44277659 + 6.36 0.000 intron (NM_001099294, intron 4 of 4) intron (NM_001099294, intron 4 of 4) 35397 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr16-5557 chr16 30565931 30566141 + 6.36 0.000 Intergenic L2a|LINE|L2 6371 NM_001024683 146542 Hs.301463 NM_145271 ENSG00000229809 ZNF688 - zinc finger protein 688 protein-coding chr3-10716 chr3 153833338 153833548 + 6.36 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -70917 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr4-7110 chr4 34492479 34492689 + 6.36 0.000 Intergenic THE1D|LTR|ERVL-MaLR -222837 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr18-3124 chr18 37552666 37552876 + 6.36 0.000 intron (NM_001353701, intron 1 of 1) intron (NM_001353701, intron 1 of 1) 13027 NM_001353752 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr1-16511 chr1 230243877 230244087 + 6.36 0.000 intron (NM_004481, intron 7 of 15) intron (NM_004481, intron 7 of 15) 176744 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr6-6839 chr6 7758757 7758967 + 6.36 0.000 intron (NM_001718, intron 1 of 6) intron (NM_001718, intron 1 of 6) 32763 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr7-6979 chr7 106237495 106237705 + 6.36 0.000 Intergenic Intergenic 47383 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr6-7073 chr6 33619514 33619724 + 6.36 0.000 Intergenic Intergenic -1703 NM_002224 3710 Hs.65758 NM_002224 ENSG00000096433 ITPR3 IP3R|IP3R3 inositol 1,4,5-trisphosphate receptor type 3 protein-coding chr2-12636 chr2 73548793 73549003 + 6.36 0.000 intron (NM_015120, intron 12 of 22) L2c|LINE|L2 91795 NR_046762 100874291 Hs.668279 NR_046762 ENSG00000230002 ALMS1-IT1 - ALMS1 intronic transcript 1 ncRNA chr12-6891 chr12 22396872 22397082 + 6.36 0.000 Intergenic Intergenic -62263 NM_001304450 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr9-5630 chr9 119928616 119928826 + 6.36 0.000 Intergenic Intergenic -6339 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr7-8105 chr7 25994644 25994854 + 6.36 0.000 Intergenic MIR|SINE|MIR -44763 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chrX-1547 chrX 45687101 45687311 + 6.36 0.000 Intergenic AluSg7|SINE|Alu -43882 NR_102268 392452 Hs.745266 NR_102268 LOC392452 - mitochondrial fission factor pseudogene pseudo chr10-6961 chr10 67266724 67266934 + 6.36 0.000 intron (NM_001127384, intron 5 of 17) L1MA7|LINE|L1 136581 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr4-6887 chr4 13013576 13013786 + 6.36 0.000 Intergenic THE1D|LTR|ERVL-MaLR 470659 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr16-1952 chr16 48583697 48583907 + 6.36 0.000 intron (NM_153029, intron 1 of 6) intron (NM_153029, intron 1 of 6) 26378 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr1-12925 chr1 118111170 118111380 + 6.36 0.000 intron (NM_206996, intron 4 of 48) intron (NM_206996, intron 4 of 48) 73953 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr11-8351 chr11 79656688 79656898 + 6.36 0.000 Intergenic MIRb|SINE|MIR -215763 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr7-9111 chr7 106983103 106983313 + 6.36 0.000 Intergenic AluSx|SINE|Alu -61497 NM_002736 5577 Hs.433068 NM_002736 ENSG00000005249 PRKAR2B PRKAR2|RII-BETA protein kinase cAMP-dependent type II regulatory subunit beta protein-coding chr3-5898 chr3 38689841 38690051 + 6.36 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -40259 NM_001354701 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr5-6783 chr5 90267115 90267325 + 6.36 0.000 intron (NR_120601, intron 1 of 5) MER5A|DNA|hAT-Charlie 22851 NR_120601 101929495 Hs.346679 NR_120601 LINC01339 - long intergenic non-protein coding RNA 1339 ncRNA chr15-5136 chr15 90365989 90366199 + 6.36 0.000 Intergenic Intergenic 13810 NM_001004309 342132 Hs.55307 NM_001004309 ENSG00000196391 ZNF774 - zinc finger protein 774 protein-coding chr1-13025 chr1 163941106 163941316 + 6.36 0.000 Intergenic Intergenic -518020 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr6-3947 chr6 87298475 87298685 + 6.36 0.000 intron (NM_198568, intron 2 of 2) L1ME3A|LINE|L1 -24008 NM_001287445 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr17-4210 chr17 33804370 33804580 + 6.36 0.000 intron (NM_001094, intron 1 of 9) (ATGA)n|Simple_repeat|Simple_repeat -270715 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr3-8313 chr3 63116307 63116517 + 6.36 0.000 intron (NR_027104, intron 3 of 6) MER72B|LTR|ERV1 13724 NR_027104 285401 Hs.211125 NR_027104 ENSG00000244342 LINC00698 - long intergenic non-protein coding RNA 698 ncRNA chr6-6320 chr6 46015532 46015742 + 6.36 0.000 5' UTR (NM_001256023, exon 1 of 6) 5' UTR (NM_001256023, exon 1 of 6) 223 NM_016929 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr15-4079 chr15 71118743 71118953 + 6.36 0.000 Intergenic Intergenic -22601 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr6-4340 chr6 17297276 17297486 + 6.36 0.000 Intergenic Intergenic 14680 NM_153020 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr16-4279 chr16 25867655 25867865 + 6.36 0.000 intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) -157477 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr20-3479 chr20 57652366 57652576 + 6.36 0.000 exon (NM_199171, exon 4 of 4) exon (NM_199171, exon 4 of 4) -32045 NM_001160418 81030 Hs.302123 NM_030776 ENSG00000124256 ZBP1 C20orf183|DAI|DLM-1|DLM1 Z-DNA binding protein 1 protein-coding chr6-7681 chr6 85739304 85739514 + 6.36 0.000 Intergenic MER31B|LTR|ERV1 -60676 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr10-8959 chr10 118641383 118641593 + 6.36 0.000 Intergenic Intergenic -45840 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chrX-2428 chrX 77917164 77917374 + 6.36 0.000 intron (NM_001282224, intron 1 of 21) intron (NM_001282224, intron 1 of 21) 6576 NM_000052 538 Hs.496414 NM_000052 ENSG00000165240 ATP7A DSMAX|MK|MNK|SMAX3 ATPase copper transporting alpha protein-coding chr14-1484 chr14 31206126 31206336 + 6.36 0.000 intron (NM_015382, intron 1 of 42) intron (NM_015382, intron 1 of 42) 1562 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr17-4859 chr17 63955709 63955919 + 6.36 0.000 intron (NM_000334, intron 13 of 23) intron (NM_000334, intron 13 of 23) 17104 NM_000334 6329 Hs.46038 NM_000334 ENSG00000007314 SCN4A CMS16|HOKPP2|HYKPP|HYPP|NAC1A|Na(V)1.4|Nav1.4|SkM1 sodium voltage-gated channel alpha subunit 4 protein-coding chr18-797 chr18 58297339 58297549 + 6.36 0.000 intron (NM_001144965, intron 5 of 30) L2a|LINE|L2 75873 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr2-8336 chr2 108666125 108666335 + 6.36 0.000 intron (NM_001193484, intron 2 of 9) MER21B|LTR|ERVL 11196 NM_001193485 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr6-6342 chr6 55168294 55168504 + 6.36 0.000 intron (NM_001526, intron 1 of 7) intron (NM_001526, intron 1 of 7) 61939 NM_001526 3062 Hs.151624 NM_001526 ENSG00000137252 HCRTR2 OX2R hypocretin receptor 2 protein-coding chr7-6382 chr7 151831847 151832057 + 6.36 0.000 intron (NM_016203, intron 1 of 15) MamGypLTR1a|LTR|Gypsy -17081 NM_001040633 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr4-1903 chr4 25320609 25320819 + 6.36 0.000 intron (NM_001318148, intron 3 of 8) intron (NM_001318148, intron 3 of 8) 7940 NM_024936 29063 Hs.278945 NM_024936 ENSG00000168228 ZCCHC4 HSPC052|ZGRF4 zinc finger CCHC-type containing 4 protein-coding chr21-1446 chr21 29505165 29505375 + 6.36 0.000 Intergenic Intergenic 9223 NR_146594 54147 Hs.124532 NR_146594 ENSG00000234293 BACH1-IT3 C21orf8|NCRNA00097 BACH1 intronic transcript 3 ncRNA chr19-6494 chr19 17834359 17834569 + 6.36 0.000 intron (NM_000215, intron 17 of 23) intron (NM_000215, intron 17 of 23) -12945 NM_005543 3640 Hs.37062 NM_005543 ENSG00000248099 INSL3 RLF|RLNL|ley-I-L insulin like 3 protein-coding chr18-1451 chr18 44482793 44483003 + 6.36 0.000 intron (NR_110792, intron 2 of 4) LTR86A1|LTR|ERVL 48799 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr2-8638 chr2 145565369 145565579 + 6.36 0.000 Intergenic L2a|LINE|L2 897507 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr10-7717 chr10 30788553 30788763 + 6.36 0.000 Intergenic L3|LINE|CR1 65439 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr5-7465 chr5 32768311 32768521 + 6.36 0.000 intron (NM_001364460, intron 2 of 6) intron (NM_001364460, intron 2 of 6) 57095 NM_001204375 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chrX-4525 chrX 67398937 67399147 + 6.36 0.000 Intergenic L1PB2|LINE|L1 -144979 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr2-14675 chr2 236928965 236929175 + 6.36 0.000 Intergenic Intergenic 127097 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr11-8502 chr11 121892289 121892499 + 6.36 0.000 Intergenic L3b|LINE|CR1 207450 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr6-7777 chr6 96972649 96972859 + 6.36 0.000 intron (NR_136580, intron 2 of 9) intron (NR_136580, intron 2 of 9) -37322 NR_136579 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr2-13620 chr2 159295423 159295633 + 6.36 0.000 Intergenic AluJb|SINE|Alu -8825 NM_001330276 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr2-7285 chr2 235966176 235966386 + 6.36 0.000 intron (NM_001037131, intron 12 of 17) intron (NM_001037131, intron 12 of 17) 202105 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr8-2807 chr8 124226349 124226559 + 6.36 0.000 intron (NR_125420, intron 1 of 2) intron (NR_125420, intron 1 of 2) 20944 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr11-8655 chr11 3411268 3411478 + 6.36 0.000 Intergenic AluJb|SINE|Alu -19458 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr10-7483 chr10 11008051 11008261 + 6.36 0.000 intron (NM_001326339, intron 1 of 11) intron (NM_001326339, intron 1 of 11) 2497 NM_001326339 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr3-9159 chr3 33153777 33153987 + 6.36 0.000 exon (NM_015551, exon 5 of 5) exon (NM_015551, exon 5 of 5) 39924 NM_006371 10491 Hs.517888 NM_006371 ENSG00000170275 CRTAP CASP|LEPREL3|OI7|P3H5 cartilage associated protein protein-coding chr8-4653 chr8 135200009 135200219 + 6.36 0.000 Intergenic Intergenic -34017 NR_120396 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA chr8-4846 chr8 33394780 33394990 + 6.36 0.000 intron (NM_032664, intron 3 of 4) intron (NM_032664, intron 3 of 4) 78261 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr3-5330 chr3 129425712 129425922 + 6.36 0.000 intron (NM_207307, intron 1 of 8) L3|LINE|CR1 2819 NM_207307 90288 Hs.652347 NM_207307 ENSG00000172771 EFCAB12 C3orf25 EF-hand calcium binding domain 12 protein-coding chr7-7998 chr7 16298266 16298476 + 6.36 0.000 intron (NR_160656, intron 3 of 7) intron (NR_160656, intron 3 of 7) 87885 NR_038947 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr19-4874 chr19 40213151 40213361 + 6.36 0.000 intron (NM_002446, intron 8 of 9) intron (NM_002446, intron 8 of 9) 5143 NM_152479 148014 Hs.631572 NM_152479 ENSG00000174521 TTC9B - tetratricopeptide repeat domain 9B protein-coding chr22-3368 chr22 29370711 29370921 + 6.36 0.000 intron (NM_001166019, intron 1 of 20) intron (NM_001166019, intron 1 of 20) 17754 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr11-9925 chr11 75639750 75639960 + 6.36 0.000 intron (NM_207577, intron 1 of 2) intron (NM_207577, intron 1 of 2) 28579 NM_033063 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr2-6600 chr2 235244731 235244941 + 6.36 0.000 Intergenic (TTTGT)n|Simple_repeat|Simple_repeat 217101 NM_001371306 chr7-8467 chr7 48480236 48480446 + 6.36 0.000 intron (NM_152701, intron 45 of 61) LOR1b|LTR|ERV1 308883 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr20-2308 chr20 6519668 6519878 + 6.36 0.000 intron (NR_109953, intron 3 of 3) intron (NR_109953, intron 3 of 3) 93041 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr11-10361 chr11 111336812 111337022 + 6.36 0.000 Intergenic Intergenic -10840 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chr19-4624 chr19 14407556 14407766 + 6.36 0.000 intron (NM_001784, intron 16 of 17) AluJo|SINE|Alu 11680 NM_005804 10212 Hs.311609 NM_005804 ENSG00000123136 DDX39A BAT1|BAT1L|DDX39|DDXL|URH49 DExD-box helicase 39A protein-coding chr3-11113 chr3 186221009 186221219 + 6.36 0.000 intron (NM_001346, intron 20 of 24) intron (NM_001346, intron 20 of 24) -112025 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr6-8315 chr6 145014829 145015039 + 6.36 0.000 Intergenic Intergenic 609279 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr1-9138 chr1 18878577 18878787 + 6.36 0.000 intron (NM_001161504, intron 9 of 14) MER103C|DNA|hAT-Charlie 4593 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 - microRNA 4695 ncRNA chr11-8378 chr11 89197438 89197648 + 6.36 0.000 intron (NM_000372, intron 2 of 4) intron (NM_000372, intron 2 of 4) 19668 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr11-10195 chr11 95700037 95700247 + 6.36 0.000 Intergenic Intergenic 89640 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr14-3695 chr14 103492407 103492617 + 6.36 0.000 intron (NM_001128920, intron 15 of 15) intron (NM_001128920, intron 15 of 15) 30318 NM_001823 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr1-14021 chr1 26958784 26958994 + 6.36 0.000 intron (NM_152365, intron 1 of 3) intron (NM_152365, intron 1 of 3) 1579 NM_152365 126695 Hs.188881 NM_152365 ENSG00000175707 KDF1 C1orf172|ECTD12 keratinocyte differentiation factor 1 protein-coding chr5-8406 chr5 126789002 126789212 + 6.36 0.000 intron (NR_134488, intron 1 of 11) AluJb|SINE|Alu 11971 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr2-12465 chr2 60413738 60413948 + 6.36 0.000 Intergenic Intergenic -22468 NR_132992 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr10-5217 chr10 62795206 62795416 + 6.36 0.000 Intergenic UCON2|DNA?|DNA? -9409 NM_032804 84890 Hs.99821 NM_032804 ENSG00000181915 ADO C10orf22 2-aminoethanethiol dioxygenase protein-coding chr9-3908 chr9 134586267 134586477 + 6.36 0.000 Intergenic Intergenic -55433 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr22-3510 chr22 49303341 49303551 + 6.36 0.000 Intergenic Intergenic 240020 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr2-10636 chr2 14428326 14428536 + 6.36 0.000 Intergenic MIRc|SINE|MIR -27473 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr9-8638 chr9 129247426 129247636 + 6.36 0.000 Intergenic MIR|SINE|MIR -34885 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr1-15996 chr1 197065388 197065598 + 6.36 0.000 intron (NM_001994, intron 1 of 11) L1ME3G|LINE|L1 1774 NM_001994 2165 Hs.435782 NM_001994 ENSG00000143278 F13B FXIIIB coagulation factor XIII B chain protein-coding chr6-7570 chr6 72319547 72319757 + 6.36 0.000 intron (NM_001350466, intron 19 of 24) intron (NM_001350466, intron 19 of 24) -47094 NM_001168411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr15-3331 chr15 80335533 80335743 + 6.36 0.000 intron (NR_033833, intron 1 of 2) intron (NR_033833, intron 1 of 2) 6167 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA chr18-1194 chr18 29013032 29013242 + 6.36 0.000 Intergenic Intergenic -836007 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr14-3000 chr14 53167580 53167790 + 6.36 0.000 Intergenic Intergenic 14331 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr19-6259 chr19 7500866 7501076 + 6.36 0.000 exon (NM_198534, exon 2 of 9) exon (NM_198534, exon 2 of 9) 3423 NM_198534 374877 Hs.631862 NM_198534 ENSG00000198723 TEX45 C19orf45 testis expressed 45 protein-coding chr17-7636 chr17 28699484 28699694 + 6.36 0.000 intron (NM_003170, intron 32 of 36) intron (NM_003170, intron 32 of 36) 10515 NM_001366303 147011 Hs.207471 NM_152465 ENSG00000167525 PROCA1 - protein interacting with cyclin A1 protein-coding chr16-5701 chr16 79600516 79600726 + 6.36 0.000 5' UTR (NM_001031804, exon 1 of 1) 5' UTR (NM_001031804, exon 1 of 1) 116 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr4-5900 chr4 136357255 136357465 + 6.36 0.000 Intergenic Intergenic -443680 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr14-5076 chr14 84813893 84814103 + 6.36 0.000 Intergenic L1PA5|LINE|L1 -457934 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr19-5005 chr19 47199754 47199964 + 6.36 0.000 intron (NM_005500, intron 7 of 8) intron (NM_005500, intron 7 of 8) -27083 NR_036158 100422899 NR_036158 ENSG00000265134 MIR3190 mir-3190 microRNA 3190 ncRNA chr19-6246 chr19 6832160 6832370 + 6.36 0.000 intron (NM_001258206, intron 15 of 25) MIR3|SINE|MIR -55314 NM_001974 2015 Hs.2375 NM_001974 ENSG00000174837 ADGRE1 EMR1|TM7LN3 adhesion G protein-coupled receptor E1 protein-coding chr15-4282 chr15 37561531 37561741 + 6.36 0.000 Intergenic L1PA13|LINE|L1 -372971 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chrX-2145 chrX 34728513 34728723 + 6.36 0.000 Intergenic MIR1_Amn|SINE|MIR -71333 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr1-15186 chr1 109641349 109641559 + 6.36 0.000 Intergenic Intergenic -14622 NR_024538 2948 Hs.348387 NM_000850 ENSG00000168765 GSTM4 GSTM4-4|GTM4 glutathione S-transferase mu 4 protein-coding chr7-5847 chr7 88040197 88040407 + 6.36 0.000 intron (NM_001324421, intron 3 of 28) AluSx1|SINE|Alu 106051 NM_001324421 53616 Hs.256398 NM_004194 ENSG00000008277 ADAM22 ADAM 22|EIEE61|MDC2 ADAM metallopeptidase domain 22 protein-coding chr6-7182 chr6 38235496 38235706 + 6.36 0.000 intron (NM_052893, intron 10 of 11) intron (NM_052893, intron 10 of 11) -245995 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr4-8132 chr4 127186062 127186272 + 6.36 0.000 Intergenic L1M1|LINE|L1 -446790 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr18-2941 chr18 13652988 13653198 + 6.36 0.000 TTS (NM_181481) TTS (NM_181481) 11335 NM_001276251 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr15-4970 chr15 79087396 79087606 + 6.36 0.000 intron (NM_001145648, intron 1 of 26) intron (NM_001145648, intron 1 of 26) 3279 NM_002891 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr7-9196 chr7 116199094 116199304 + 6.36 0.000 Intergenic MLT1G3-int|LTR|ERVL-MaLR -11340 NM_015641 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr14-2090 chr14 71932171 71932381 + 6.36 0.000 promoter-TSS (NM_001204424) promoter-TSS (NM_001204424) 105 NM_001370289 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr17-7734 chr17 33753264 33753474 + 6.36 0.000 intron (NM_001094, intron 1 of 9) L1MC2|LINE|L1 -219609 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr6-2633 chr6 157370499 157370709 + 6.36 0.000 Intergenic AluSx1|SINE|Alu -10586 NM_024630 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr14-3739 chr14 36045333 36045543 + 6.36 0.000 Intergenic Intergenic -24989 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chr9-8038 chr9 95679126 95679336 + 6.36 0.000 Intergenic Intergenic -162174 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr3-3782 chr3 13094536 13094746 + 6.36 0.000 Intergenic MIR|SINE|MIR -21212 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr20-3786 chr20 21629541 21629751 + 6.36 0.000 intron (NR_109878, intron 1 of 4) intron (NR_109878, intron 1 of 4) 59622 NR_109880 101929625 Hs.542413 NR_109880 LINC01727 - long intergenic non-protein coding RNA 1727 ncRNA chr14-3959 chr14 22061574 22061784 + 6.36 0.000 Intergenic L1MD1|LINE|L1 371074 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr10-8490 chr10 89459673 89459883 + 6.36 0.000 intron (NR_120614, intron 1 of 2) AluSq|SINE|Alu 3787 NR_120614 101926906 Hs.568874 NR_120614 ENSG00000234452 SLC16A12-AS1 - SLC16A12 antisense RNA 1 ncRNA chr17-5726 chr17 57723232 57723442 + 6.36 0.000 Intergenic Intergenic 21962 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr7-5399 chr7 33753974 33754184 + 6.36 0.000 Intergenic Intergenic -150836 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr5-7211 chr5 7902486 7902696 + 6.36 0.000 Intergenic L2a|LINE|L2 33443 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr3-9086 chr3 27712885 27713095 + 6.36 0.000 Intergenic CpG 9333 NM_001278182 8320 Hs.591663 NM_005442 ENSG00000163508 EOMES TBR2 eomesodermin protein-coding chr15-4762 chr15 69743208 69743418 + 6.36 0.000 Intergenic Intergenic -91921 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr19-4757 chr19 29781031 29781241 + 6.36 0.000 Intergenic Intergenic -30855 NM_001238 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr9-5834 chr9 130096695 130096905 + 6.36 0.000 intron (NM_020960, intron 9 of 17) L1ME5|LINE|L1 42894 NM_001136557 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chr4-5797 chr4 81084050 81084260 + 6.36 0.000 Intergenic MLT2F|LTR|ERVL 53447 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr5-7616 chr5 44935723 44935933 + 6.36 0.000 Intergenic Intergenic 126881 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr5-8411 chr5 126966687 126966897 + 6.36 0.000 intron (NM_178450, intron 1 of 4) Tigger15a|DNA|TcMar-Tigger 63766 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr13-3258 chr13 36693490 36693700 + 6.36 0.000 intron (NM_203451, intron 1 of 1) intron (NM_203451, intron 1 of 1) 19575 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr2-9152 chr2 211541668 211541878 + 6.36 0.000 intron (NM_001042599, intron 20 of 26) intron (NM_001042599, intron 20 of 26) 884587 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr16-3600 chr16 75614471 75614681 + 6.36 0.000 intron (NM_001324448, intron 6 of 8) MamRep605|LTR?|LTR? 8705 NM_001324445 23536 Hs.729312 NM_012091 ENSG00000065457 ADAT1 HADAT1 adenosine deaminase tRNA specific 1 protein-coding chr6-7376 chr6 49252908 49253118 + 6.36 0.000 Intergenic L1P4|LINE|L1 210240 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr7-4718 chr7 50213004 50213214 + 6.36 0.000 Intergenic Intergenic -90955 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr4-8534 chr4 163745851 163746061 + 6.36 0.000 intron (NM_001166373, intron 3 of 7) L1MC1|LINE|L1 -132422 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr4-7408 chr4 64983484 64983694 + 6.25 0.000 intron (NR_033976, intron 1 of 6) Tigger1|DNA|TcMar-Tigger 20911 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr5-8993 chr5 164092023 164092233 + 6.25 0.000 Intergenic Intergenic 375274 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr1-14348 chr1 40809387 40809597 + 6.25 0.000 intron (NM_004700, intron 1 of 13) L2|LINE|L2 25705 NM_172163 9132 Hs.473058 NM_004700 ENSG00000117013 KCNQ4 DFNA2|DFNA2A|KV7.4 potassium voltage-gated channel subfamily Q member 4 protein-coding chr2-11790 chr2 15728859 15729069 + 6.25 0.000 Intergenic Intergenic 38182 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr1-16348 chr1 219126390 219126600 + 6.25 0.000 intron (NR_038845, intron 3 of 4) intron (NR_038845, intron 3 of 4) 47293 NR_038845 643723 Hs.519774 NR_038845 LYPLAL1-DT LYPLAL1-AS1 LYPLAL1 divergent transcript ncRNA chr10-8482 chr10 89086655 89086865 + 6.25 0.000 Intergenic Intergenic -23349 NR_039827 100616192 NR_039827 ENSG00000265375 MIR4679-2 - microRNA 4679-2 ncRNA chr8-5513 chr8 61424261 61424471 + 6.25 0.000 intron (NM_173519, intron 3 of 5) intron (NM_173519, intron 3 of 5) 136396 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr4-4689 chr4 86441182 86441392 + 6.25 0.000 intron (NM_002753, intron 1 of 13) intron (NM_002753, intron 1 of 13) 11908 NM_002753 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr1-14076 chr1 29388554 29388764 + 6.25 0.000 Intergenic THE1C|LTR|ERVL-MaLR -38545 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr10-6940 chr10 58771625 58771835 + 6.25 0.000 intron (NM_001080512, intron 3 of 20) L2|LINE|L2 56715 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr1-16543 chr1 233323617 233323827 + 6.25 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -4002 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr9-7974 chr9 92480330 92480540 + 6.25 0.000 intron (NM_017680, intron 1 of 8) intron (NM_017680, intron 1 of 8) 2071 NM_001193335 54829 Hs.435655 NM_017680 ENSG00000106819 ASPN OS3|PLAP-1|PLAP1|SLRR1C asporin protein-coding chr8-3073 chr8 21057237 21057447 + 6.25 0.000 Intergenic Intergenic 83356 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LINC02153 - long intergenic non-protein coding RNA 2153 ncRNA chr10-7232 chr10 122362027 122362237 + 6.25 0.000 Intergenic Intergenic -12576 NM_001330178 59338 Hs.643512 NM_021622 ENSG00000107679 PLEKHA1 TAPP1 pleckstrin homology domain containing A1 protein-coding chr1-9124 chr1 18101556 18101766 + 6.25 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat -6137 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr1-3311 chr1 9250223 9250433 + 6.25 0.000 intron (NM_001282587, intron 3 of 4) intron (NM_001282587, intron 3 of 4) 10481 NM_001282587 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr17-7312 chr17 4716350 4716560 + 6.25 0.000 exon (NM_001257328, exon 5 of 15) exon (NM_001257328, exon 5 of 15) 5823 NM_199004 409 Hs.435811 NM_004313 ENSG00000141480 ARRB2 ARB2|ARR2|BARR2 arrestin beta 2 protein-coding chr11-10576 chr11 122739804 122740014 + 6.25 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 84187 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr12-6056 chr12 112855449 112855659 + 6.25 0.000 intron (NR_145127, intron 5 of 22) intron (NR_145127, intron 5 of 22) -51223 NM_002534 4938 Hs.524760 NM_002534 ENSG00000089127 OAS1 E18/E16|IFI-4|OIAS|OIASI 2'-5'-oligoadenylate synthetase 1 protein-coding chr15-2635 chr15 69863299 69863509 + 6.25 0.000 Intergenic Intergenic 28170 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr10-6951 chr10 64328146 64328356 + 6.25 0.000 Intergenic L1M2|LINE|L1 -497277 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr7-4479 chr7 137820649 137820859 + 6.25 0.000 intron (NM_001321708, intron 1 of 32) intron (NM_001321708, intron 1 of 32) 25578 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr16-6107 chr16 13394265 13394475 + 6.25 0.000 Intergenic Intergenic 492772 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr6-2865 chr6 4647654 4647864 + 6.25 0.000 Intergenic Intergenic 37194 NR_122107 497048 Hs.591355 NM_001011540 ENSG00000205444 KU-MEL-3 - uncharacterized LOC497048 ncRNA chr19-4828 chr19 36032282 36032492 + 6.25 0.000 5' UTR (NM_001199570, exon 1 of 13) 5' UTR (NM_001199570, exon 1 of 13) 248 NM_001199570 25999 Hs.466539 NM_015526 ENSG00000105270 CLIP3 CLIPR-59|CLIPR59|RSNL1 CAP-Gly domain containing linker protein 3 protein-coding chr6-6027 chr6 117506569 117506779 + 6.25 0.000 intron (NM_173674, intron 2 of 14) intron (NM_173674, intron 2 of 14) 24000 NM_001366459 285761 Hs.658304 NM_173674 ENSG00000164465 DCBLD1 dJ94G16.1 discoidin, CUB and LCCL domain containing 1 protein-coding chr1-15496 chr1 155867821 155868031 + 6.25 0.000 intron (NM_152280, intron 1 of 3) intron (NM_152280, intron 1 of 3) 8359 NM_152280 23208 Hs.32984 NM_152280 ENSG00000132718 SYT11 SYT12|sytXI synaptotagmin 11 protein-coding chr2-11203 chr2 159547291 159547501 + 6.25 0.000 intron (NM_001329858, intron 2 of 36) intron (NM_001329858, intron 2 of 36) -67898 NR_110587 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA chr6-5225 chr6 134686201 134686411 + 6.25 0.000 Intergenic Intergenic -146301 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr9-7247 chr9 4103381 4103591 + 6.25 0.000 intron (NM_001042413, intron 4 of 10) intron (NM_001042413, intron 4 of 10) 48697 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr19-6215 chr19 5998075 5998285 + 6.25 0.000 intron (NM_000635, intron 15 of 17) AluSz|SINE|Alu 19777 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA chr14-5155 chr14 91144573 91144783 + 6.25 0.000 intron (NM_001286471, intron 1 of 13) MLT1K|LTR|ERVL-MaLR 18252 NR_003709 100124539 Hs.693444 NR_003709 ENSG00000221102 SNORA11B - small nucleolar RNA, H/ACA box 11B snoRNA chr9-7698 chr9 72196109 72196319 + 6.25 0.000 intron (NM_001351573, intron 2 of 14) AluSx|SINE|Alu 46774 NR_147240 9615 Hs.494163 NM_004293 ENSG00000119125 GDA CYPIN|GAH|GUANASE|NEDASIN guanine deaminase protein-coding chr6-7368 chr6 48535751 48535961 + 6.25 0.000 Intergenic MER89|LTR|ERV1 -467167 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr12-5140 chr12 99752856 99753066 + 6.25 0.000 intron (NM_152788, intron 8 of 25) intron (NM_152788, intron 8 of 25) 105208 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr7-8631 chr7 70056664 70056874 + 6.25 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 458294 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr20-3792 chr20 22411521 22411731 + 6.25 0.000 intron (NR_027089, intron 1 of 3) intron (NR_027089, intron 1 of 3) 9017 NR_027089 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr13-3715 chr13 39123902 39124112 + 6.25 0.000 Intergenic Intergenic 85551 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr4-7994 chr4 114874992 114875202 + 6.25 0.000 intron (NM_022569, intron 6 of 13) intron (NM_022569, intron 6 of 13) 218338 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chrX-5305 chrX 143109074 143109284 + 6.25 0.000 Intergenic Intergenic 83251 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr15-2527 chr15 41926452 41926662 + 6.25 0.000 intron (NR_120332, intron 2 of 3) intron (NR_120332, intron 2 of 3) 5140 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr1-12468 chr1 17703000 17703210 + 6.25 0.000 Intergenic LTR16C|LTR|ERVL -52228 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr11-6270 chr11 58513742 58513952 + 6.25 0.000 Intergenic Intergenic -5742 NM_001005218 219968 Hs.553647 NM_001005218 ENSG00000198283 OR5B21 - olfactory receptor family 5 subfamily B member 21 protein-coding chr13-2504 chr13 53600996 53601206 + 6.25 0.000 Intergenic Intergenic -214318 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr12-6473 chr12 99798374 99798584 + 6.25 0.000 intron (NM_152788, intron 4 of 25) L3|LINE|CR1 150726 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr2-13465 chr2 146412690 146412900 + 6.25 0.000 Intergenic LTR1|LTR|ERV1 -174262 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr17-5170 chr17 10062848 10063058 + 6.25 0.000 intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) -26296 NM_201432 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr2-10383 chr2 176481787 176481997 + 6.25 0.000 Intergenic Intergenic 119160 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr10-3640 chr10 97899712 97899922 + 6.25 0.000 intron (NM_001206528, intron 8 of 14) intron (NM_001206528, intron 8 of 14) -23920 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr16-6460 chr16 57341362 57341572 + 6.25 0.000 Intergenic MIRc|SINE|MIR -17316 NM_002990 6367 Hs.534347 NM_002990 ENSG00000102962 CCL22 A-152E5.1|ABCD-1|DC/B-CK|MDC|SCYA22|STCP-1 C-C motif chemokine ligand 22 protein-coding chr8-6193 chr8 34806689 34806899 + 6.25 0.000 intron (NR_125746, intron 2 of 3) L2b|LINE|L2 22873 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr11-3884 chr11 96293000 96293210 + 6.25 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -48333 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr16-3457 chr16 610822 611032 + 6.25 0.000 intron (NM_021168, intron 1 of 5) intron (NM_021168, intron 1 of 5) -20058 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr8-5176 chr8 100436551 100436761 + 6.25 0.000 Intergenic Intergenic 53893 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr13-3891 chr13 52964625 52964835 + 6.25 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -64083 NM_006418 10562 Hs.508113 NM_006418 ENSG00000102837 OLFM4 GC1|GW112|OLM4|OlfD|UNQ362|bA209J19.1|hGC-1|hOLfD olfactomedin 4 protein-coding chr11-8721 chr11 7288782 7288992 + 6.25 0.000 intron (NM_175733, intron 1 of 6) intron (NM_175733, intron 1 of 6) 36983 NM_175733 143425 Hs.177193 NM_175733 ENSG00000170743 SYT9 - synaptotagmin 9 protein-coding chr20-1896 chr20 54062928 54063138 + 6.25 0.000 intron (NM_001366297, intron 1 of 8) intron (NM_001366297, intron 1 of 8) -4013 NM_001323347 8537 Hs.400556 NM_003657 ENSG00000064787 BCAS1 AIBC1|NABC1 breast carcinoma amplified sequence 1 protein-coding chr1-8870 chr1 4000885 4001095 + 6.25 0.000 Intergenic Intergenic -52010 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr12-7500 chr12 67731039 67731249 + 6.25 0.000 Intergenic Intergenic -1669 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr3-6134 chr3 55556140 55556350 + 6.25 0.000 intron (NM_015576, intron 16 of 16) intron (NM_015576, intron 16 of 16) -68603 NM_003392 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr2-8717 chr2 157855870 157856080 + 6.25 0.000 intron (NM_001347664, intron 1 of 11) intron (NM_001347664, intron 1 of 11) -17345 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr1-8307 chr1 45601944 45602154 + 6.25 0.000 intron (NM_001195193, intron 2 of 12) intron (NM_001195193, intron 2 of 12) 18008 NM_152298 4678 Hs.319334 NM_002482 ENSG00000132780 NASP FLB7527|HMDRA1|PRO1999 nuclear autoantigenic sperm protein protein-coding chr10-9245 chr10 133295843 133296053 + 6.25 0.000 intron (NM_006659, intron 5 of 17) intron (NM_006659, intron 5 of 17) -12966 NM_145806 118472 Hs.422113 NM_145806 ENSG00000198546 ZNF511 - zinc finger protein 511 protein-coding chr4-8215 chr4 136180328 136180538 + 6.25 0.000 Intergenic MER44C|DNA|TcMar-Tigger -266753 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr22-4265 chr22 48610177 48610387 + 6.25 0.000 intron (NM_015381, intron 1 of 3) intron (NM_015381, intron 1 of 3) 33942 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr17-6719 chr17 80825729 80825939 + 6.25 0.000 intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -20202 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr10-6306 chr10 102582210 102582420 + 6.25 0.000 intron (NM_001178133, intron 3 of 10) intron (NM_001178133, intron 3 of 10) -62180 NM_030912 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr1-13519 chr1 6017250 6017460 + 6.25 0.000 intron (NM_001199861, intron 1 of 15) AluJo|SINE|Alu -8978 NM_003636 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr17-7302 chr17 4380489 4380699 + 6.25 0.000 Intergenic AluSx4|SINE|Alu -13920 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr1-8577 chr1 173647057 173647267 + 6.25 0.000 intron (NM_198493, intron 2 of 5) MIR|SINE|MIR 11824 NM_001195190 730159 Hs.647757 NM_001195190 ENSG00000232113 TEX50 - testis expressed 50 protein-coding chr2-13240 chr2 125516415 125516625 + 6.25 0.000 Intergenic L1PA17|LINE|L1 601465 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr10-6530 chr10 68907998 68908208 + 6.25 0.000 intron (NM_024045, intron 2 of 14) L1ME4a|LINE|L1 6788 NM_024045 79009 Hs.522984 NM_024045 ENSG00000107625 DDX50 GU2|GUB|RH-II/GuB|mcdrh DExD-box helicase 50 protein-coding chr20-3197 chr20 49791577 49791787 + 6.25 0.000 Intergenic AluJr|SINE|Alu -21031 NM_001260491 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr16-6843 chr16 82203152 82203362 + 6.25 0.000 Intergenic LTR16E2|LTR|ERVL -33033 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr6-7756 chr6 93417305 93417515 + 6.25 0.000 intron (NM_004440, intron 1 of 16) CpG 2149 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chrX-4828 chrX 102583091 102583301 + 6.25 0.000 Intergenic Intergenic -16010 NM_001168479 64860 Hs.522729 NM_022838 ENSG00000125962 ARMCX5 GASP5 armadillo repeat containing X-linked 5 protein-coding chr14-5214 chr14 96131091 96131301 + 6.25 0.000 Intergenic L2c|LINE|L2 -73602 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr22-3194 chr22 36397594 36397804 + 6.25 0.000 Intergenic Intergenic -9632 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr4-8001 chr4 116281326 116281536 + 6.25 0.000 Intergenic AluY|SINE|Alu -18294 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr5-5814 chr5 177187758 177187968 + 6.25 0.000 intron (NM_172349, intron 3 of 23) MLT1C|LTR|ERVL-MaLR 53634 NM_001365684 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr20-2487 chr20 33036368 33036578 + 6.25 0.000 exon (NM_174897, exon 7 of 15) exon (NM_174897, exon 7 of 15) 4825 NM_174897 128859 Hs.375090 NM_174897 ENSG00000167104 BPIFB6 BPIL3|LPLUNC6 BPI fold containing family B member 6 protein-coding chr20-4257 chr20 49310913 49311123 + 6.25 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 30335 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr14-3723 chr14 23695963 23696173 + 6.25 0.000 Intergenic HERV3-int|LTR|ERV1 59704 NM_005794 10202 Hs.272499 NM_005794 ENSG00000100867 DHRS2 HEP27|SDR25C1 dehydrogenase/reductase 2 protein-coding chr2-5081 chr2 10548965 10549175 + 6.25 0.000 Intergenic Intergenic 99342 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr18-2329 chr18 9661557 9661767 + 6.25 0.000 Intergenic LTR16|LTR|ERVL 46398 NR_110774 101927323 Hs.151204 NR_110773 ENSG00000263627 PPP4R1-AS1 - PPP4R1 antisense RNA 1 ncRNA chr1-14378 chr1 43498602 43498812 + 6.25 0.000 Intergenic AluSx3|SINE|Alu -27330 NM_001329138 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr4-8671 chr4 179619287 179619497 + 6.25 0.000 Intergenic Intergenic 1539757 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr5-6709 chr5 66671253 66671463 + 6.25 0.000 intron (NM_001290228, intron 1 of 4) intron (NM_001290228, intron 1 of 4) 74965 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr3-4800 chr3 126126395 126126605 + 6.25 0.000 intron (NR_072979, intron 13 of 20) intron (NR_072979, intron 13 of 20) 22860 NR_046602 100874204 Hs.742339 NR_046602 ENSG00000250218 ALDH1L1-AS1 - ALDH1L1 antisense RNA 1 ncRNA chr9-7042 chr9 123164366 123164576 + 6.25 0.000 intron (NM_001171137, intron 6 of 18) intron (NM_001171137, intron 6 of 18) -48994 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chrX-3000 chrX 48830233 48830443 + 6.25 0.000 TTS (NM_013271) TTS (NM_013271) 3825 NM_181532 3266 Hs.447330 NM_181532 ENSG00000187682 ERAS HRAS2|HRASP ES cell expressed Ras protein-coding chr20-3220 chr20 58217394 58217604 + 6.25 0.000 3' UTR (NM_001304369, exon 4 of 4) 3' UTR (NM_001304369, exon 4 of 4) 11154 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr17-1820 chr17 2270995 2271205 + 6.25 0.000 intron (NM_017575, intron 8 of 18) intron (NM_017575, intron 8 of 18) -4915 NM_001256827 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr11-9422 chr11 59441514 59441724 + 6.25 0.000 Intergenic Intergenic -1550 NM_001004728 219982 Hs.553649 NM_001004728 ENSG00000172320 OR5A1 OR11-249|OR5A1P|OST181 olfactory receptor family 5 subfamily A member 1 protein-coding chr3-6742 chr3 139519574 139519784 + 6.25 0.000 intron (NM_002899, intron 2 of 3) L2b|LINE|L2 19957 NM_001365940 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr1-15409 chr1 151850544 151850754 + 6.25 0.000 non-coding (NR_024237, exon 5 of 5) non-coding (NR_024237, exon 5 of 5) 3063 NM_182578 284486 Hs.132648 NM_182578 ENSG00000196407 THEM5 ACOT15 thioesterase superfamily member 5 protein-coding chr12-3482 chr12 122145842 122146052 + 6.25 0.000 3' UTR (NM_014938, exon 17 of 17).2 3' UTR (NM_014938, exon 17 of 17).2 -21772 NM_152759 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chrX-4543 chrX 68883497 68883707 + 6.25 0.000 Intergenic MamTip1|DNA|hAT-Tip100 54605 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr3-4477 chr3 51333658 51333868 + 6.25 0.000 intron (NM_004947, intron 35 of 52) intron (NM_004947, intron 35 of 52) -51528 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr2-12511 chr2 64366912 64367122 + 6.25 0.000 Intergenic CR1-3_Croc|LINE|CR1 -26169 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr2-8098 chr2 76089132 76089342 + 6.25 0.000 Intergenic AluSp|SINE|Alu -378322 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr21-1412 chr21 10331058 10331268 + 6.25 0.000 Intergenic Intergenic -82357 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding chr14-4051 chr14 55944495 55944705 + 6.25 0.000 Intergenic Intergenic -147926 NR_026796 645687 Hs.569345 NR_026796 ENSG00000258791 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA chr4-8615 chr4 172229661 172229871 + 6.25 0.000 intron (NM_001034845, intron 3 of 12) intron (NM_001034845, intron 3 of 12) -416159 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr11-9001 chr11 24093171 24093381 + 6.25 0.000 Intergenic Intergenic -403777 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr2-13652 chr2 161352346 161352556 + 6.25 0.000 intron (NM_005805, intron 3 of 11) intron (NM_005805, intron 3 of 11) 44026 NM_005805 10213 Hs.740477 NM_005805 ENSG00000115233 PSMD14 PAD1|POH1|RPN11 proteasome 26S subunit, non-ATPase 14 protein-coding chr16-6339 chr16 49913266 49913476 + 6.25 0.000 Intergenic AluJo|SINE|Alu -55452 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr11-7897 chr11 127338713 127338923 + 6.25 0.000 Intergenic Intergenic 67748 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr2-7191 chr2 211887129 211887339 + 6.25 0.000 intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 539126 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr14-4000 chr14 36844520 36844730 + 6.25 0.000 intron (NM_001171170, intron 2 of 10) intron (NM_001171170, intron 2 of 10) 107766 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chrX-3469 chrX 31271072 31271282 + 6.25 0.000 intron (NM_000109, intron 62 of 78) L2|LINE|L2 -4223 NM_004018 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr12-3593 chr12 49964690 49964900 + 6.25 0.000 intron (NM_001651, intron 3 of 3) intron (NM_001651, intron 3 of 3) -1871 NR_110589 101927318 Hs.668233 NR_110589 ENSG00000257588 LOC101927318 - uncharacterized LOC101927318 ncRNA chr10-6461 chr10 32030128 32030338 + 6.25 0.000 intron (NM_004521, intron 14 of 25) intron (NM_004521, intron 14 of 25) 26192 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr4-3387 chr4 27214611 27214821 + 6.25 0.000 Intergenic AluJb|SINE|Alu -2763 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr12-6822 chr12 13067194 13067404 + 6.25 0.000 intron (NM_020853, intron 7 of 12) intron (NM_020853, intron 7 of 12) 22918 NM_020853 57613 Hs.132660 NM_020853 ENSG00000084444 FAM234B KIAA1467 family with sequence similarity 234 member B protein-coding chr16-4807 chr16 86144062 86144272 + 6.25 0.000 Intergenic LTR16C|LTR|ERVL -52014 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr8-1947 chr8 52955851 52956061 + 6.25 0.000 Intergenic HERV9NC-int|LTR|ERV1 16048 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr7-8746 chr7 77242310 77242520 + 6.25 0.000 intron (NM_020879, intron 4 of 18) intron (NM_020879, intron 4 of 18) -42596 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding chr1-13704 chr1 14598811 14599021 + 6.25 0.000 5' UTR (NM_015209, exon 1 of 8) 5' UTR (NM_015209, exon 1 of 8) 199 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr11-4720 chr11 69918554 69918764 + 6.25 0.000 Intergenic MIRb|SINE|MIR -99243 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr18-3418 chr18 63262455 63262665 + 6.25 0.000 intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 56820 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chrX-3005 chrX 50901857 50902067 + 6.25 0.000 Intergenic Intergenic -8773 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr12-4669 chr12 47397728 47397938 + 6.25 0.000 Intergenic L1PA16|LINE|L1 -17175 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr7-6602 chr7 98469744 98469954 + 6.25 0.000 Intergenic AluSx|SINE|Alu -68759 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr11-9866 chr11 73509703 73509913 + 6.25 0.000 intron (NM_001286051, intron 1 of 5) intron (NM_001286051, intron 1 of 5) 88304 NM_015159 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr5-4960 chr5 78113905 78114115 + 6.25 0.000 intron (NM_003664, intron 18 of 26) intron (NM_003664, intron 18 of 26) 155763 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr3-4393 chr3 195209784 195209994 + 6.25 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 38031 NM_001308069 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr10-9138 chr10 128001995 128002205 + 6.25 0.000 intron (NM_001323354, intron 1 of 19) intron (NM_001323354, intron 1 of 19) 3953 NM_001323354 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr9-6360 chr9 17884502 17884712 + 6.25 0.000 Intergenic Intergenic 305541 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chrX-2583 chrX 104489057 104489267 + 6.25 0.000 Intergenic L2b|LINE|L2 -77037 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr20-4448 chr20 62163877 62164087 + 6.25 0.000 intron (NR_125980, intron 7 of 12) AluSx|SINE|Alu -19043 NM_015666 26164 Hs.340636 NM_015666 ENSG00000101181 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome associated GTPase 2 protein-coding chr20-4184 chr20 45450435 45450645 + 6.25 0.000 Intergenic MIR|SINE|MIR -19213 NM_006103 10406 Hs.2719 NM_006103 ENSG00000101443 WFDC2 EDDM4|HE4|WAP5|dJ461P17.6 WAP four-disulfide core domain 2 protein-coding chr7-3630 chr7 41997490 41997700 + 6.25 0.000 intron (NM_000168, intron 10 of 14) intron (NM_000168, intron 10 of 14) 239614 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr5-6920 chr5 135150942 135151152 + 6.25 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) 97130 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr11-7609 chr11 45680512 45680722 + 6.25 0.000 Intergenic Intergenic 11159 NR_106976 102465691 NR_106976 ENSG00000276639 MIR7154 hsa-mir-7154 microRNA 7154 ncRNA chr12-3082 chr12 12779592 12779802 + 6.25 0.000 intron (NM_001130415, intron 1 of 1) L1ME4c|LINE|L1 -5962 NM_030817 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chr11-9177 chr11 35554196 35554406 + 6.25 0.000 Intergenic Intergenic -24001 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr8-6562 chr8 69646212 69646422 + 6.25 0.000 intron (NR_132437, intron 16 of 16) MIR|SINE|MIR 53417 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr16-3546 chr16 48728074 48728284 + 6.25 0.000 Intergenic AluJr|SINE|Alu -117999 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr21-1382 chr21 43022700 43022910 + 6.25 0.000 intron (NM_004571, intron 8 of 10) intron (NM_004571, intron 8 of 10) 45599 NM_001321072 875 Hs.533013 NM_000071 ENSG00000160200 CBS CBSL|HIP4 cystathionine-beta-synthase protein-coding chr6-6896 chr6 12688127 12688337 + 6.25 0.000 Intergenic L1PREC2|LINE|L1 -28535 NM_001322308 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chrX-3642 chrX 98800275 98800485 + 6.25 0.000 Intergenic Intergenic -1235845 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr7-9202 chr7 116500720 116500930 + 6.25 0.000 intron (NM_001233, intron 2 of 2) intron (NM_001233, intron 2 of 2) 779 NM_001206748 858 Hs.212332 NM_001233 ENSG00000105971 CAV2 CAV caveolin 2 protein-coding chr13-3826 chr13 47710911 47711121 + 6.25 0.000 Intergenic Intergenic 221606 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr10-6811 chr10 15486075 15486285 + 6.25 0.000 Intergenic Intergenic -114891 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr17-8137 chr17 58572925 58573135 + 6.25 0.000 intron (NM_031272, intron 23 of 31) intron (NM_031272, intron 23 of 31) -28702 NM_001038704 5414 Hs.287518 NM_004574 ENSG00000108387 SEPTIN4 ARTS|BRADEION|C17orf47|CE5B3|H5|MART|PNUTL2|SEP4|SEPT4|hCDCREL-2|hucep-7 septin 4 protein-coding chr12-3997 chr12 24199230 24199440 + 6.25 0.000 intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -13086 NR_030625 100126320 NR_030625 ENSG00000216192 MIR920 MIRN920|hsa-mir-920 microRNA 920 ncRNA chr3-8579 chr3 156738160 156738370 + 6.25 0.000 Intergenic Intergenic 61601 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr8-2264 chr8 80768019 80768229 + 6.25 0.000 intron (NM_001033723, intron 2 of 8) intron (NM_001033723, intron 2 of 8) 106344 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr3-8625 chr3 170034852 170035062 + 6.25 0.000 Intergenic Intergenic -3038 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr7-7016 chr7 129095105 129095315 + 6.25 0.000 Intergenic Intergenic -31061 NR_002144 407835 Hs.592273 NR_002144 LOC407835 - mitogen-activated protein kinase kinase 2 pseudogene pseudo chr10-2138 chr10 48579458 48579668 + 6.25 0.000 intron (NM_001347736, intron 3 of 3) intron (NM_001347736, intron 3 of 3) 25510 NR_144642 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr11-7274 chr11 32487190 32487400 + 6.25 0.000 Intergenic L2a|LINE|L2 51256 NR_120546 51352 Hs.567499 NM_015855 ENSG00000183242 WT1-AS WIT-1|WIT1|WT1-AS1|WT1AS WT1 antisense RNA ncRNA chr20-1326 chr20 63364511 63364721 + 6.25 0.000 intron (NR_110634, intron 3 of 4) intron (NR_110634, intron 3 of 4) -3220 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr13-2814 chr13 102693944 102694154 + 6.25 0.000 intron (NM_001010977, intron 1 of 3) intron (NM_001010977, intron 1 of 3) 472 NM_001010977 196541 Hs.508623 NM_001010977 ENSG00000139780 METTL21C C13orf39 methyltransferase like 21C protein-coding chr5-4164 chr5 98786265 98786475 + 6.25 0.000 intron (NM_001366510, intron 4 of 4) intron (NM_001366510, intron 4 of 4) 12707 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr14-4896 chr14 72382617 72382827 + 6.25 0.000 intron (NM_001370288, intron 3 of 16) L1ME3D|LINE|L1 -134098 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr9-6363 chr9 18726528 18726738 + 6.25 0.000 intron (NM_001040272, intron 15 of 28) intron (NM_001040272, intron 15 of 28) 153327 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr4-5492 chr4 78058841 78059051 + 6.25 0.000 intron (NM_001166133, intron 1 of 41) CpG 1376 NM_001166133 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr22-3150 chr22 26105645 26105855 + 6.25 0.000 Intergenic Intergenic -63712 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr13-3888 chr13 52790040 52790250 + 6.25 0.000 Intergenic Intergenic -19905 NR_031582 100313778 NR_031582 ENSG00000211579 MIR759 hsa-mir-759 microRNA 759 ncRNA chr4-5888 chr4 129791680 129791890 + 6.25 0.000 intron (NR_151713, intron 2 of 16) MIRc|SINE|MIR 20166 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr11-8066 chr11 29527361 29527571 + 6.25 0.000 Intergenic LTR4|LTR|ERV1 -66947 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr12-8090 chr12 117837119 117837329 + 6.25 0.000 intron (NM_173598, intron 3 of 19) MIR3|SINE|MIR 131766 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr20-1779 chr20 55395431 55395641 + 6.25 0.000 Intergenic MER5B|DNA|hAT-Charlie -27507 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA chr20-3438 chr20 48558375 48558585 + 6.25 0.000 Intergenic Intergenic 198569 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr19-5469 chr19 39324753 39324963 + 6.25 0.000 Intergenic L1ME2z|LINE|L1 -9522 NM_020862 57622 Hs.97860 NM_020862 ENSG00000128011 LRFN1 SALM2 leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr14-3121 chr14 67411901 67412111 + 6.25 0.000 intron (NM_016445, intron 1 of 8) CpG 159 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr12-6385 chr12 69089372 69089582 + 6.25 0.000 Intergenic Intergenic -126237 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr11-10215 chr11 97712979 97713189 + 6.25 0.000 Intergenic Intergenic 1204659 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr7-8585 chr7 66574158 66574368 + 6.25 0.000 intron (NR_111975, intron 1 of 3) L2c|LINE|L2 18144 NR_111973 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr3-6281 chr3 72031599 72031809 + 6.25 0.000 Intergenic LTR33C|LTR|ERVL 68751 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr1-16571 chr1 234770400 234770610 + 6.25 0.000 Intergenic Intergenic -10449 NR_148962 100130249 Hs.617350 NR_148962 ENSG00000279261 PP2672 - uncharacterized LOC100130249 ncRNA chr14-5174 chr14 92205083 92205293 + 6.25 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 83219 NM_001322270 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chrX-4203 chrX 36346616 36346826 + 6.25 0.000 intron (NM_001304548, intron 57 of 63) intron (NM_001304548, intron 57 of 63) 93571 NR_110412 101928627 Hs.590831 NR_110412 ENSG00000226484 LOC101928627 - uncharacterized LOC101928627 ncRNA chr1-15555 chr1 158572226 158572436 + 6.25 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 7568 NM_001004477 128367 Hs.553589 NM_001004477 ENSG00000279111 OR10X1 OR1-13|OR1-14|OR10X1P olfactory receptor family 10 subfamily X member 1 (gene/pseudogene) protein-coding chr1-11227 chr1 246315264 246315474 + 6.25 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 102043 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr11-5214 chr11 14268056 14268266 + 6.25 0.000 TTS (NM_006108) TTS (NM_006108) 90324 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr13-3562 chr13 25398414 25398624 + 6.25 0.000 intron (NM_016529, intron 1 of 36) intron (NM_016529, intron 1 of 36) 26545 NM_016529 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr14-4099 chr14 67795447 67795657 + 6.25 0.000 intron (NM_015346, intron 12 of 41) intron (NM_015346, intron 12 of 41) 21038 NM_015346 23503 Hs.98041 NM_015346 ENSG00000072121 ZFYVE26 FYVE-CENT|SPG15 zinc finger FYVE-type containing 26 protein-coding chr15-4473 chr15 49927484 49927694 + 6.25 0.000 intron (NR_073596, intron 16 of 27) intron (NR_073596, intron 16 of 27) 185790 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr7-8347 chr7 43309109 43309319 + 6.25 0.000 intron (NM_001287059, intron 2 of 27) intron (NM_001287059, intron 2 of 27) 158319 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr20-2033 chr20 61920 62130 + 6.25 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -25647 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr16-6360 chr16 50818537 50818747 + 6.25 0.000 Intergenic Intergenic 11970 NR_146573 105371252 NR_146573 ENSG00000261703 LINC02168 - long intergenic non-protein coding RNA 2168 ncRNA chr5-7475 chr5 33485845 33486055 + 6.25 0.000 Intergenic Intergenic 45174 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr12-7943 chr12 109262378 109262588 + 6.25 0.000 intron (NM_001093, intron 49 of 52) intron (NM_001093, intron 49 of 52) 46801 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr3-8574 chr3 155423931 155424141 + 6.25 0.000 Intergenic Intergenic -61767 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr3-10770 chr3 157180370 157180580 + 6.25 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -19715 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr2-9644 chr2 20485368 20485578 + 6.25 0.000 intron (NR_157978, intron 2 of 3) intron (NR_157978, intron 2 of 3) 16051 NR_157978 107985856 NR_157978 LOC107985856 - uncharacterized LOC107985856 ncRNA chrX-3946 chrX 10704278 10704488 + 6.25 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) -26644 NM_001098624 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr5-8977 chr5 161915627 161915837 + 6.25 0.000 intron (NR_126372, intron 2 of 2) MLT1L|LTR|ERVL-MaLR 65007 NM_001127648 2554 Hs.175934 NM_000806 ENSG00000022355 GABRA1 ECA4|EIEE19|EJM|EJM5 gamma-aminobutyric acid type A receptor alpha1 subunit protein-coding chr1-16551 chr1 233747947 233748157 + 6.25 0.000 Intergenic Intergenic 123900 NR_039625 100616390 NR_039625 ENSG00000265744 MIR4427 - microRNA 4427 ncRNA chr4-3823 chr4 119783298 119783508 + 6.25 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 21112 NR_110660 101927007 Hs.143958 NR_110660 ENSG00000250772 LINC01365 - long intergenic non-protein coding RNA 1365 ncRNA chr9-7628 chr9 38153618 38153828 + 6.25 0.000 Intergenic Intergenic -84496 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr16-4994 chr16 20075228 20075438 + 6.25 0.000 Intergenic Intergenic -1555 NM_001318483 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr12-7086 chr12 43624198 43624408 + 6.25 0.000 Intergenic Intergenic -72100 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr2-8356 chr2 109452913 109453123 + 6.25 0.000 intron (NM_001099289, intron 8 of 9) intron (NM_001099289, intron 8 of 9) -139393 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr8-1657 chr8 19756751 19756961 + 6.25 0.000 intron (NM_001354488, intron 1 of 9) CpG 227 NM_001354490 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr1-13086 chr1 181679428 181679638 + 6.25 0.000 intron (NM_001205293, intron 7 of 47) intron (NM_001205293, intron 7 of 47) 196016 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr2-12180 chr2 40640630 40640840 + 6.25 0.000 Intergenic Intergenic -128300 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chrX-1570 chrX 63616952 63617162 + 6.25 0.000 Intergenic L1PA7|LINE|L1 54445 NR_138419 100874355 Hs.671524 NR_138419 ENSG00000231729 ARHGEF9-IT1 - ARHGEF9 intronic transcript 1 ncRNA chr4-6792 chr4 7458849 7459059 + 6.25 0.000 intron (NM_020777, intron 2 of 26) intron (NM_020777, intron 2 of 26) -1074 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chrX-5101 chrX 128078268 128078478 + 6.25 0.000 Intergenic L1P4|LINE|L1 -25970 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr10-6600 chr10 88282546 88282756 + 6.25 0.000 intron (NM_018363, intron 6 of 6) intron (NM_018363, intron 6 of 6) 300667 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr5-7597 chr5 43132107 43132317 + 6.25 0.000 intron (NM_001330705, intron 3 of 5) intron (NM_001330705, intron 3 of 5) 10647 NM_001330714 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr3-10719 chr3 153941216 153941426 + 6.25 0.000 Intergenic AluY|SINE|Alu -178795 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr17-7102 chr17 72476699 72476909 + 6.25 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 116000 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr2-12764 chr2 85341333 85341543 + 6.25 0.000 TTS (NM_017750) TTS (NM_017750) 13090 NM_017750 54884 Hs.440401 NM_017750 ENSG00000042445 RETSAT - retinol saturase protein-coding chr3-8108 chr3 17551385 17551595 + 6.25 0.000 intron (NM_001349075, intron 1 of 22) intron (NM_001349075, intron 1 of 22) 148530 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr2-5835 chr2 236365828 236366038 + 6.25 0.000 intron (NR_073043, intron 14 of 19) intron (NR_073043, intron 14 of 19) -101588 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr2-9794 chr2 121131219 121131429 + 6.25 0.000 Intergenic AluJb|SINE|Alu 153878 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr5-6282 chr5 109253162 109253372 + 6.25 0.000 intron (NR_149040, intron 3 of 3) intron (NR_149040, intron 3 of 3) 73102 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr10-6617 chr10 96102639 96102849 + 6.25 0.000 Intergenic AluJr|SINE|Alu -12509 NR_134321 728558 Hs.538374 NR_038444 ENSG00000226688 ENTPD1-AS1 - ENTPD1 antisense RNA 1 ncRNA chr1-6500 chr1 23665356 23665566 + 6.25 0.000 Intergenic AluSz|SINE|Alu -26318 NM_001199802 6135 Hs.719951 NM_000975 ENSG00000142676 RPL11 DBA7|GIG34|L11|uL5 ribosomal protein L11 protein-coding chr8-4686 chr8 139377894 139378104 + 6.25 0.000 Intergenic Intergenic 325124 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr15-5254 chr15 98634805 98635015 + 6.25 0.000 Intergenic Intergenic -13629 NM_000875 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding chr10-8079 chr10 67771033 67771243 + 6.25 0.000 Intergenic Intergenic 67041 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr3-7443 chr3 126404396 126404606 + 6.25 0.000 intron (NM_182628, intron 2 of 16) LTR24B|LTR|ERV1 9592 NM_182628 348807 Hs.591305 NM_182628 ENSG00000163885 CFAP100 CCDC37|MIA1 cilia and flagella associated protein 100 protein-coding chr3-9984 chr3 98801066 98801276 + 6.25 0.000 intron (NM_080927, intron 14 of 15) intron (NM_080927, intron 14 of 15) 37864 NM_001323368 10402 Hs.148716 NM_006100 ENSG00000064225 ST3GAL6 SIAT10|ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding chr13-2286 chr13 29475006 29475216 + 6.25 0.000 intron (NM_015233, intron 2 of 8) Tigger3b|DNA|TcMar-Tigger 12639 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr11-6779 chr11 87213974 87214184 + 6.25 0.000 intron (NR_033149, intron 4 of 13) intron (NR_033149, intron 4 of 13) 176145 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr20-4389 chr20 58065950 58066160 + 6.25 0.000 Intergenic Intergenic 62151 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr13-3331 chr13 63954600 63954810 + 6.25 0.000 Intergenic L1M1|LINE|L1 -110580 NR_130763 102723968 Hs.551671 NR_130763 ENSG00000219926 LOC102723968 - uncharacterized LOC102723968 ncRNA chr15-5090 chr15 88098727 88098937 + 6.25 0.000 intron (NM_001007156, intron 13 of 15) MER96B|DNA|hAT 107142 NM_001320135 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr11-9258 chr11 43525111 43525321 + 6.25 0.000 Intergenic ERVL-B4-int|LTR|ERVL -34440 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA chr20-2690 chr20 46399415 46399625 + 6.25 0.000 intron (NM_133171, intron 1 of 21) L2c|LINE|L2 7095 NM_133171 63916 Hs.210469 NM_022086 ENSG00000062598 ELMO2 CED-12|CED12|Ced-12A|ELMO-2|VMPI engulfment and cell motility 2 protein-coding chr14-2051 chr14 65255109 65255319 + 6.25 0.000 Intergenic MamGypLTR1a|LTR|Gypsy -32867 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr2-9902 chr2 225031604 225031814 + 6.25 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) 10759 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr6-5919 chr6 54582341 54582551 + 6.25 0.000 Intergenic L1ME2|LINE|L1 -264325 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr5-4664 chr5 37071571 37071781 + 6.25 0.000 Intergenic L2|LINE|L2 -177370 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chr9-6454 chr9 85479066 85479276 + 6.25 0.000 Intergenic L2a|LINE|L2 262858 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr11-5022 chr11 79393916 79394126 + 6.25 0.000 intron (NM_001098816, intron 1 of 33) intron (NM_001098816, intron 1 of 33) 8088 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr8-5583 chr8 87756325 87756535 + 6.25 0.000 Intergenic LTR38|LTR|ERV1 117585 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr3-8603 chr3 164365198 164365408 + 6.25 0.000 Intergenic Intergenic -193747 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr21-1078 chr21 32232894 32233104 + 6.25 0.000 Intergenic Intergenic 46050 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr3-5586 chr3 7476455 7476665 + 6.25 0.000 intron (NM_000844, intron 7 of 9) AluSc8|SINE|Alu 58724 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr3-10954 chr3 176657657 176657867 + 6.25 0.000 Intergenic L1ME3A|LINE|L1 -22230 NR_109968 100505547 Hs.253350 NR_109968 LINC01208 - long intergenic non-protein coding RNA 1208 ncRNA chr3-8755 chr3 2412640 2412850 + 6.25 0.000 intron (NM_175607, intron 3 of 24) intron (NM_175607, intron 3 of 24) 173916 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr4-7877 chr4 104588895 104589105 + 6.25 0.000 intron (NR_125926, intron 1 of 9) intron (NR_125926, intron 1 of 9) -94106 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr18-2703 chr18 61482867 61483077 + 6.25 0.000 intron (NM_031891, intron 1 of 11) L2c|LINE|L2 149542 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr1-11192 chr1 241770443 241770653 + 6.25 0.000 intron (NM_001367482, intron 17 of 27) intron (NM_001367482, intron 17 of 27) -77643 NM_001319224 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr12-5588 chr12 30454893 30455103 + 6.25 0.000 Intergenic Intergenic 222246 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr10-7494 chr10 11874580 11874790 + 6.25 0.000 intron (NR_038222, intron 2 of 5) intron (NR_038222, intron 2 of 5) 20025 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr14-5307 chr14 101570771 101570981 + 6.25 0.000 Intergenic L1MA8|LINE|L1 9525 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chrX-2284 chrX 50988868 50989078 + 6.25 0.000 Intergenic Intergenic 78238 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr5-6389 chr5 141794983 141795193 + 6.25 0.000 Intergenic Intergenic 71114 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr19-5696 chr19 12701379 12701589 + 6.25 0.000 intron (NM_013433, intron 23 of 24) intron (NM_013433, intron 23 of 24) 2187 NR_132756 106633804 NR_132756 SNORD135 ZL2 small nucleolar RNA, C/D box 135 snoRNA chr14-2085 chr14 71478649 71478859 + 6.25 0.000 intron (NM_001284247, intron 1 of 23) L1ME1|LINE|L1 -9107 NR_027046 145474 Hs.658241 NR_027046 LOC145474 - uncharacterized LOC145474 ncRNA chr11-8341 chr11 77422729 77422939 + 6.25 0.000 intron (NM_001128620, intron 1 of 15) intron (NM_001128620, intron 1 of 15) 51229 NM_002576 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr15-4815 chr15 73070857 73071067 + 6.25 0.000 intron (NM_002499, intron 1 of 28) intron (NM_002499, intron 1 of 28) 18478 NM_001172624 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr3-8235 chr3 48674182 48674392 + 6.25 0.000 3' UTR (NM_184231, exon 13 of 13) 3' UTR (NM_184231, exon 13 of 13) 10519 NR_111921 102724368 Hs.663571 NR_111921 ENSG00000228350 LINC02585 CELSR3-AS1 long intergenic non-protein coding RNA 2585 ncRNA chr4-4980 chr4 133432794 133433004 + 6.25 0.000 Intergenic MLT2D|LTR|ERVL 283605 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr22-3902 chr22 36135605 36135815 + 6.25 0.000 Intergenic L3b|LINE|CR1 25045 NM_145639 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr1-13349 chr1 817993 818203 + 6.25 0.000 non-coding (NR_103536, exon 1 of 2) non-coding (NR_103536, exon 1 of 2) 727 NR_103536 400728 Hs.568078 NM_207464 ENSG00000177757 FAM87B - family with sequence similarity 87 member B ncRNA chr2-8574 chr2 136605009 136605219 + 6.25 0.000 Intergenic AluJb|SINE|Alu -160431 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr12-3233 chr12 57383732 57383942 + 6.25 0.000 intron (NM_001351217, intron 1 of 21) intron (NM_001351217, intron 1 of 21) -41381 NM_001351214 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr16-3064 chr16 57729346 57729556 + 6.25 0.000 intron (NM_032269, intron 16 of 17) (GGAT)n|Simple_repeat|Simple_repeat -6319 NM_005886 10300 Hs.275675 NM_005886 ENSG00000140854 KATNB1 KAT|LIS6 katanin regulatory subunit B1 protein-coding chr5-9072 chr5 171342335 171342545 + 6.25 0.000 Intergenic Intergenic -23678 NR_145720 109616973 NR_145720 ENSG00000206909 SNORA70J - small nucleolar RNA, H/ACA box 70J snoRNA chr18-2889 chr18 10670856 10671066 + 6.25 0.000 3' UTR (NM_022068, exon 52 of 52) 3' UTR (NM_022068, exon 52 of 52) 9028 NR_110777 101927410 Hs.436902 NR_110777 ENSG00000260779 LOC101927410 - uncharacterized LOC101927410 ncRNA chr6-7992 chr6 115792294 115792504 + 6.25 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -148564 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr7-5767 chr7 75885611 75885821 + 6.25 0.000 intron (NM_001040456, intron 3 of 3) MSTB|LTR|ERVL-MaLR 6682 NM_001040456 57414 Hs.488827 NM_020684 ENSG00000005486 RHBDD2 NPD007|RHBDL7 rhomboid domain containing 2 protein-coding chr11-8635 chr11 2559047 2559257 + 6.25 0.000 intron (NM_181798, intron 2 of 15) L2b|LINE|L2 97698 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr7-6023 chr7 106957711 106957921 + 6.25 0.000 Intergenic Intergenic -86889 NM_002736 5577 Hs.433068 NM_002736 ENSG00000005249 PRKAR2B PRKAR2|RII-BETA protein kinase cAMP-dependent type II regulatory subunit beta protein-coding chr13-3607 chr13 29149888 29150098 + 6.25 0.000 intron (NM_001033602, intron 3 of 13) L1PA11|LINE|L1 125536 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr8-7286 chr8 131165529 131165739 + 6.25 0.000 Intergenic MIRc|SINE|MIR -124725 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr6-7371 chr6 48835864 48836074 + 6.25 0.000 Intergenic MER50|LTR|ERV1 627284 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr17-4401 chr17 31397844 31398054 + 6.25 0.000 intron (NM_032932, intron 1 of 14) AluJo|SINE|Alu 6274 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr22-4253 chr22 48241707 48241917 + 6.25 0.000 Intergenic Intergenic -32552 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr13-3116 chr13 73110946 73111156 + 6.25 0.000 Intergenic Intergenic 52046 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr3-10545 chr3 140342805 140343015 + 6.25 0.000 intron (NM_022131, intron 2 of 16) MLT1G|LTR|ERVL-MaLR 165879 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr1-14414 chr1 44776111 44776321 + 6.25 0.000 promoter-TSS (NR_000024) promoter-TSS (NR_000024) -276 NR_000024 94161 NR_000024 ENSG00000200913 SNORD46 RNU40|RNU46|U40|U46 small nucleolar RNA, C/D box 46 snoRNA chr5-4170 chr5 103425919 103426129 + 6.25 0.000 Intergenic Intergenic 115961 NR_104670 102467212 Hs.641885 NR_104670 ENSG00000248757 LINC02115 - long intergenic non-protein coding RNA 2115 ncRNA chr15-4483 chr15 50642169 50642379 + 6.25 0.000 intron (NR_149154, intron 5 of 37) MER58A|DNA|hAT-Charlie 44523 NM_001301212 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr18-2251 chr18 70562076 70562286 + 6.25 0.000 Intergenic Intergenic 88773 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr16-5649 chr16 67294908 67295118 + 6.25 0.000 exon (NM_001100915, exon 10 of 16) exon (NM_001100915, exon 10 of 16) 15481 NM_001129729 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding chr19-5069 chr19 50697236 50697446 + 6.25 0.000 intron (NM_016148, intron 14 of 23) intron (NM_016148, intron 14 of 23) 22461 NM_016148 50944 Hs.274255 NM_016148 ENSG00000161681 SHANK1 SPANK-1|SSTRIP|synamon SH3 and multiple ankyrin repeat domains 1 protein-coding chr7-6317 chr7 140745596 140745806 + 6.25 0.000 intron (NR_148928, intron 16 of 17) L2b|LINE|L2 -48624 NR_024454 100134713 Hs.534141 NR_024454 ENSG00000240889 NDUFB2-AS1 - NDUFB2 antisense RNA 1 ncRNA chr20-2569 chr20 37001823 37002033 + 6.25 0.000 intron (NM_002895, intron 21 of 21) (A)n|Simple_repeat|Simple_repeat -50085 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr7-4974 chr7 151160797 151161007 + 6.25 0.000 intron (NM_001098834, intron 1 of 1) intron (NM_001098834, intron 1 of 1) 6646 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chrX-5379 chrX 150779333 150779543 + 6.25 0.000 intron (NM_001184808, intron 4 of 7) intron (NM_001184808, intron 4 of 7) 67683 NM_001353996 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr11-10380 chr11 112530019 112530229 + 6.25 0.000 intron (NR_120559, intron 2 of 2) intron (NR_120559, intron 2 of 2) 25678 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chrX-1478 chrX 124336572 124336782 + 6.25 0.000 3' UTR (NM_001355534, exon 1 of 1) 3' UTR (NM_001355534, exon 1 of 1) 4017 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr10-8651 chr10 99719326 99719536 + 6.25 0.000 intron (NM_004376, intron 6 of 8) AluSx|SINE|Alu -12803 NM_015960 51076 Hs.16606 NM_015960 ENSG00000119929 CUTC CGI-32 cutC copper transporter protein-coding chr3-10028 chr3 102950436 102950646 + 6.25 0.000 Intergenic Intergenic 515526 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr18-1668 chr18 66445827 66446037 + 6.25 0.000 Intergenic L1MB3|LINE|L1 158158 NM_001271028 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr12-3747 chr12 42484036 42484246 + 6.25 0.000 promoter-TSS (NM_001144883) promoter-TSS (NM_001144883) -131 NM_001144883 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr10-5347 chr10 72033917 72034127 + 6.25 0.000 Intergenic Intergenic 54529 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chrX-4870 chrX 105510214 105510424 + 6.25 0.000 intron (NM_017416, intron 6 of 10) (TG)n|Simple_repeat|Simple_repeat -289626 NM_031274 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr17-7799 chr17 39942902 39943112 + 6.25 0.000 intron (NM_001195545, intron 1 of 1) intron (NM_001195545, intron 1 of 1) 1533 NM_001195545 100505591 Hs.145136 NM_001195545 ENSG00000204913 LRRC3C - leucine rich repeat containing 3C protein-coding chr11-10096 chr11 86303098 86303308 + 6.25 0.000 intron (NR_024598, intron 1 of 3) intron (NR_024598, intron 1 of 3) 963 NM_001322404 51501 Hs.283322 NM_016401 ENSG00000149196 HIKESHI C11orf73|HLD13|HSPC138|HSPC179|L7RN6|OPI10 heat shock protein nuclear import factor hikeshi protein-coding chr17-5678 chr17 50623577 50623787 + 6.25 0.000 intron (NM_198383, intron 33 of 35) intron (NM_198383, intron 33 of 35) -11199 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chrX-3913 chrX 9349561 9349771 + 6.25 0.000 Intergenic Intergenic -113629 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr1-14381 chr1 43551360 43551570 + 6.25 0.000 intron (NM_001329137, intron 4 of 34) intron (NM_001329137, intron 4 of 34) 20582 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr2-13730 chr2 168169177 168169387 + 6.25 0.000 intron (NM_013233, intron 2 of 17) intron (NM_013233, intron 2 of 17) 78313 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr11-7788 chr11 94028563 94028773 + 6.25 0.000 intron (NM_001098672, intron 1 of 19) intron (NM_001098672, intron 1 of 19) 7314 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding chr13-2945 chr13 39696719 39696929 + 6.25 0.000 intron (NM_001145079, intron 12 of 18) L2a|LINE|L2 -32689 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr16-3676 chr16 163389 163599 + 6.25 0.000 Intergenic Intergenic -2484 NM_001003938 3042 Hs.647389 NM_001003938 ENSG00000206177 HBM HBAP2|HBK hemoglobin subunit mu protein-coding chr3-8200 chr3 43485185 43485395 + 6.25 0.000 intron (NM_001346464, intron 12 of 13) LTR17|LTR|ERV1 -133328 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chr6-7285 chr6 43530471 43530681 + 6.25 0.000 intron (NR_144392, intron 24 of 32) intron (NR_144392, intron 24 of 32) 13487 NM_001363658 9533 Hs.743509 NM_004875 ENSG00000171453 POLR1C AC40|HLD11|RPA39|RPA40|RPA5|RPAC1|RPC40|TCS3 RNA polymerase I and III subunit C protein-coding chrX-1383 chrX 153651691 153651901 + 6.25 0.000 TTS (NM_001395) TTS (NM_001395) 4593 NM_001318503 1852 Hs.144879 NM_001395 ENSG00000130829 DUSP9 MKP-4|MKP4 dual specificity phosphatase 9 protein-coding chrX-3623 chrX 86927187 86927397 + 6.25 0.000 Intergenic Intergenic -590510 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr17-6606 chr17 58479822 58480032 + 6.25 0.000 exon (NM_001080439, exon 2 of 6) exon (NM_001080439, exon 2 of 6) 8481 NM_001080439 124535 Hs.380061 NM_001080439 ENSG00000176160 HSF5 HSF 5|HSTF 5 heat shock transcription factor 5 protein-coding chr6-2852 chr6 2688457 2688667 + 6.25 0.000 intron (NM_001012418, intron 4 of 12) intron (NM_001012418, intron 4 of 12) -53959 NR_131168 154386 Hs.680574 NM_152554 ENSG00000164385 LINC01600 C6orf195|bA145H9.2 long intergenic non-protein coding RNA 1600 ncRNA chr9-5058 chr9 33117987 33118197 + 6.25 0.000 intron (NM_001497, intron 3 of 5) intron (NM_001497, intron 3 of 5) 9400 NR_162131 113219452 NR_162131 MIR12117 - microRNA 12117 ncRNA chr14-4740 chr14 61524337 61524547 + 6.25 0.000 intron (NM_006255, intron 10 of 13) intron (NM_006255, intron 10 of 13) 45752 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr18-2449 chr18 34436717 34436927 + 6.25 0.000 Intergenic AluJr|SINE|Alu -56468 NM_032975 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr10-7222 chr10 118321506 118321716 + 6.25 0.000 intron (NM_022063, intron 7 of 8) intron (NM_022063, intron 7 of 8) 20713 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr7-9686 chr7 153289348 153289558 + 6.25 0.000 Intergenic MER67C|LTR|ERV1 122781 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr20-2744 chr20 50517552 50517762 + 6.25 0.000 intron (NM_001278618, intron 1 of 8) intron (NM_001278618, intron 1 of 8) 7274 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr18-3359 chr18 58093867 58094077 + 6.25 0.000 intron (NM_001144964, intron 1 of 30) intron (NM_001144964, intron 1 of 30) 46746 NM_001144964 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr2-13442 chr2 143830137 143830347 + 6.25 0.000 Intergenic Intergenic -106825 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr12-6827 chr12 13429849 13430059 + 6.25 0.000 Intergenic L1PA17|LINE|L1 -53209 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chrX-2640 chrX 111178170 111178380 + 6.25 0.000 intron (NM_001128172, intron 8 of 14) intron (NM_001128172, intron 8 of 14) 55198 NM_001128172 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr1-16229 chr1 209259051 209259261 + 6.25 0.000 Intergenic Intergenic -66300 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr19-3759 chr19 52922731 52922941 + 6.25 0.000 Intergenic CpG -4905 NM_001310127 388559 NM_001310127 ENSG00000213793 ZNF888 - zinc finger protein 888 protein-coding chr12-7254 chr12 51995898 51996108 + 6.25 0.000 3' UTR (NM_020327, exon 9 of 9) 3' UTR (NM_020327, exon 9 of 9) -10943 NM_181711 160622 Hs.407202 NM_181711 ENSG00000161835 GRASP TAMALIN general receptor for phosphoinositides 1 associated scaffold protein protein-coding chr12-8154 chr12 121160803 121161013 + 6.25 0.000 exon (NM_002562, exon 4 of 13) exon (NM_002562, exon 4 of 13) 28032 NR_033948 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chrX-4285 chrX 42273557 42273767 + 6.25 0.000 Intergenic Intergenic -350108 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr21-1116 chr21 36390335 36390545 + 6.25 0.000 intron (NM_005441, intron 3 of 13) MamRep605|LTR?|LTR? 5048 NM_005441 8208 Hs.75238 NM_005441 ENSG00000159259 CHAF1B CAF-1|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7|MPP7 chromatin assembly factor 1 subunit B protein-coding chr7-8048 chr7 22038290 22038500 + 6.25 0.000 Intergenic MER91B|DNA|hAT-Tip100 -92496 NM_001127370 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr5-4947 chr5 76355536 76355746 + 6.25 0.000 Intergenic AluSx1|SINE|Alu -47644 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr6-2710 chr6 44388590 44388800 + 6.25 0.000 intron (NM_001253, intron 1 of 15) intron (NM_001253, intron 1 of 15) 989 NM_001253 988 Hs.485471 NM_001253 ENSG00000096401 CDC5L CDC5|CDC5-LIKE|CEF1|PCDC5RP|dJ319D22.1 cell division cycle 5 like protein-coding chr8-5481 chr8 49115945 49116155 + 6.25 0.000 Intergenic MIR|SINE|MIR 43706 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr7-5397 chr7 33692971 33693181 + 6.25 0.000 Intergenic Intergenic -211839 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr2-14416 chr2 221773127 221773337 + 6.25 0.000 Intergenic Intergenic -199030 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr19-3653 chr19 3742107 3742317 + 6.25 0.000 intron (NM_001267560, intron 14 of 20) AluJo|SINE|Alu 19480 NM_004886 9546 Hs.25527 NM_004886 ENSG00000011132 APBA3 MGC:15815|X11L2|mint3 amyloid beta precursor protein binding family A member 3 protein-coding chr5-6464 chr5 171857257 171857467 + 6.25 0.000 Intergenic Intergenic 71490 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr15-2144 chr15 74897233 74897443 + 6.25 0.000 intron (NM_001289157, intron 6 of 6) intron (NM_001289157, intron 6 of 6) 7296 NM_001289157 4351 Hs.75694 NM_002435 ENSG00000178802 MPI CDG1B|PMI|PMI1 mannose phosphate isomerase protein-coding chr1-15839 chr1 180268045 180268255 + 6.25 0.000 intron (NM_033343, intron 3 of 5) intron (NM_033343, intron 3 of 5) 6531 NR_037642 100527964 Hs.496545 NR_037642 ENSG00000230124 LHX4-AS1 - LHX4 antisense RNA 1 ncRNA chr4-6523 chr4 167710606 167710816 + 6.25 0.000 Intergenic Intergenic -381826 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr12-5447 chr12 123140234 123140444 + 6.25 0.000 Intergenic Intergenic -29850 NM_001300801 57605 Hs.272759 NM_020845 ENSG00000090975 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein membrane associated 2 protein-coding chr10-7953 chr10 54758779 54758989 + 6.25 0.000 intron (NM_001354404, intron 4 of 34) intron (NM_001354404, intron 4 of 34) 42347 NM_001354411 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding chr5-6351 chr5 136926339 136926549 + 6.25 0.000 Intergenic Intergenic -201753 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr1-12879 chr1 109261058 109261268 + 6.25 0.000 exon (NM_001408, exon 3 of 34) exon (NM_001408, exon 3 of 34) 11624 NM_001408 1952 Hs.57652 NM_001408 ENSG00000143126 CELSR2 ADGRC2|CDHF10|EGFL2|Flamingo1|MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 protein-coding chr10-5762 chr10 103497023 103497233 + 6.25 0.000 intron (NR_120675, intron 2 of 3) intron (NR_120675, intron 2 of 3) 3423 NM_004210 9148 Hs.594708 NM_004210 ENSG00000107954 NEURL1 NEUR1|NEURL|RNF67|bA416N2.1|neu|neu-1 neuralized E3 ubiquitin protein ligase 1 protein-coding chr5-4386 chr5 176630214 176630424 + 6.25 0.000 promoter-TSS (NR_036239) promoter-TSS (NR_036239) 215 NM_001318037 6620 Hs.90297 NM_003085 ENSG00000074317 SNCB - synuclein beta protein-coding chr3-5925 chr3 42937284 42937494 + 6.25 0.000 promoter-TSS (NR_122033) promoter-TSS (NR_122033) -604 NR_122033 100506275 Hs.517918 NR_122033 ENSG00000206552 KRBOX1-AS1 - KRBOX1 antisense RNA 1 ncRNA chr2-12424 chr2 57318118 57318328 + 6.25 0.000 Intergenic L1PA15|LINE|L1 -589428 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr5-4063 chr5 55802430 55802640 + 6.25 0.000 intron (NM_024415, intron 18 of 21) LTR37-int|LTR|ERV1 35650 NM_001166534 54514 Hs.223581 NM_019039 ENSG00000152670 DDX4 VASA DEAD-box helicase 4 protein-coding chr18-3287 chr18 52949413 52949623 + 6.25 0.000 intron (NM_005215, intron 5 of 28) intron (NM_005215, intron 5 of 28) -287583 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr12-7147 chr12 48030518 48030728 + 6.25 0.000 Intergenic MIRc|SINE|MIR -26147 NM_033150 1280 Hs.408182 NM_001844 ENSG00000139219 COL2A1 ANFH|AOM|COL11A3|SEDC|STL1 collagen type II alpha 1 chain protein-coding chr9-6765 chr9 22813829 22814039 + 6.25 0.000 intron (NR_038977, intron 4 of 5) intron (NR_038977, intron 4 of 5) 167734 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr4-7162 chr4 39403234 39403444 + 6.25 0.000 Intergenic L2b|LINE|L2 -3591 NM_175737 152831 Hs.90756 NM_175737 ENSG00000134962 KLB BKL klotho beta protein-coding chr2-14534 chr2 229669819 229670029 + 6.25 0.000 intron (NM_139072, intron 1 of 12) MamGypsy2-I|LTR|Gypsy 44631 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr2-4298 chr2 234620636 234620846 + 6.25 0.000 Intergenic AluSx|SINE|Alu -61927 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr1-12502 chr1 21361196 21361406 + 6.25 0.000 Intergenic Intergenic -15797 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr5-4055 chr5 45558881 45559091 + 6.25 0.000 intron (NM_021072, intron 2 of 7) AluJr4|SINE|Alu 137394 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr6-8523 chr6 159806416 159806626 + 6.25 0.000 intron (NM_173516, intron 7 of 18) Charlie1a|DNA|hAT-Charlie 6245 NM_001271862 154197 Hs.349077 NM_173516 ENSG00000146453 PNLDC1 HsPNLDC1 PARN like, ribonuclease domain containing 1 protein-coding chr1-13936 chr1 23615570 23615780 + 6.25 0.000 Intergenic MIRc|SINE|MIR -11659 NM_001348075 259283 Hs.523369 NM_001348075 MDS2 - myelodysplastic syndrome 2 translocation associated protein-coding chr8-5034 chr8 22303489 22303699 + 6.25 0.000 intron (NM_001330480, intron 10 of 21) AluJo|SINE|Alu 28027 NM_001135721 55124 Hs.614809 NM_018068 ENSG00000197181 PIWIL2 CT80|HILI|PIWIL1L|mili piwi like RNA-mediated gene silencing 2 protein-coding chr4-8663 chr4 178620859 178621069 + 6.25 0.000 Intergenic Intergenic -713028 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chrX-3978 chrX 13684420 13684630 + 6.25 0.000 Intergenic Intergenic -4596 NM_001195328 9367 Hs.495704 NM_004251 ENSG00000123595 RAB9A RAB9 RAB9A, member RAS oncogene family protein-coding chr20-3533 chr20 939114 939324 + 6.25 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -22885 NM_001322809 51378 Hs.278973 NM_015985 ENSG00000101280 ANGPT4 ANG3|ANG4 angiopoietin 4 protein-coding chr17-5090 chr17 4526655 4526865 + 6.25 0.000 intron (NM_001124758, intron 3 of 12) L2|LINE|L2 27879 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr11-8955 chr11 19539969 19540179 + 6.25 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) -15996 NR_033989 399876 Hs.132600 NR_033989 ENSG00000254622 NAV2-AS4 - NAV2 antisense RNA 4 ncRNA chr4-5809 chr4 87574941 87575151 + 6.25 0.000 Intergenic MER34|LTR|ERV1 -33483 NM_014208 1834 Hs.678914 NM_014208 ENSG00000152591 DSPP DFNA39|DGI1|DMP3|DPP|DSP dentin sialophosphoprotein protein-coding chr5-8221 chr5 108797301 108797511 + 6.25 0.000 intron (NM_001308038, intron 3 of 7) L1M1|LINE|L1 48458 NR_146155 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chrX-1255 chrX 102131413 102131623 + 6.25 0.000 Intergenic Intergenic 5839 NM_080390 140597 Hs.401835 NM_080390 ENSG00000184905 TCEAL2 MY0876G05|WEX1|my048 transcription elongation factor A like 2 protein-coding chr18-1657 chr18 60957349 60957559 + 6.25 0.000 Intergenic L1MEf|LINE|L1 -375976 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr9-5757 chr9 127382472 127382682 + 6.25 0.000 intron (NR_104591, intron 22 of 26) AluJb|SINE|Alu -14561 NM_001271711 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr3-10038 chr3 103796617 103796827 + 6.25 0.000 Intergenic Intergenic -272606 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr9-6980 chr9 109167150 109167360 + 6.25 0.000 promoter-TSS (NM_014334) promoter-TSS (NM_014334) 36 NM_014334 23732 Hs.347537 NM_014334 ENSG00000260230 FRRS1L C9orf4|CG-6|CG6|EIEE37 ferric chelate reductase 1 like protein-coding chr16-4775 chr16 85403105 85403315 + 6.25 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -96885 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr1-15743 chr1 171794181 171794391 + 6.25 0.000 intron (NM_001007239, intron 6 of 7) intron (NM_001007239, intron 6 of 7) 12626 NM_015935 51603 Hs.494705 NM_014955 ENSG00000010165 EEF1AKNMT 5630401D24Rik|CGI-01|DFNB26|DFNB26M|KIAA0859|METTL13|feat eEF1A lysine and N-terminal methyltransferase protein-coding chr12-5194 chr12 105053130 105053340 + 6.25 0.000 intron (NR_027752, intron 10 of 22) intron (NR_027752, intron 10 of 22) 31223 NR_027752 160428 Hs.42572 NM_001034173 ENSG00000136010 ALDH1L2 mtFDH aldehyde dehydrogenase 1 family member L2 protein-coding chr19-6976 chr19 48458185 48458395 + 6.25 0.000 intron (NM_013348, intron 1 of 2) L1MB7|LINE|L1 2583 NM_013348 3770 Hs.144011 NM_013348 ENSG00000182324 KCNJ14 IRK4|KIR2.4 potassium voltage-gated channel subfamily J member 14 protein-coding chr19-7108 chr19 58346100 58346310 + 6.25 0.000 3' UTR (NM_130786, exon 8 of 8) 3' UTR (NM_130786, exon 8 of 8) -5765 NR_015380 503538 Hs.709582 NR_015380 ENSG00000268895 A1BG-AS1 A1BG-AS|A1BGAS|NCRNA00181 A1BG antisense RNA 1 ncRNA chr2-11987 chr2 27386778 27386988 + 6.25 0.000 intron (NM_177983, intron 2 of 9) intron (NM_177983, intron 2 of 9) -6149 NM_144631 130557 Hs.515872 NM_144631 ENSG00000163795 ZNF513 HMFT0656|RP58 zinc finger protein 513 protein-coding chrX-3066 chrX 111923157 111923367 + 6.25 0.000 intron (NM_012471, intron 2 of 10) intron (NM_012471, intron 2 of 10) 41365 NM_001195577 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr12-6408 chr12 76018564 76018774 + 6.25 0.000 Intergenic Intergenic 13107 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr19-4731 chr19 19541155 19541365 + 6.25 0.000 intron (NM_153221, intron 4 of 7) intron (NM_153221, intron 4 of 7) 2995 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr12-7974 chr12 110676178 110676388 + 6.25 0.000 intron (NM_001256413, intron 2 of 6) intron (NM_001256413, intron 2 of 6) 12832 NM_032369 84329 Hs.211511 NM_032369 ENSG00000122986 HVCN1 HV1|VSOP hydrogen voltage gated channel 1 protein-coding chr6-6576 chr6 137647918 137648128 + 6.25 0.000 Intergenic MIR|SINE|MIR -17623 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr1-7501 chr1 150405492 150405702 + 6.25 0.000 intron (NM_015203, intron 1 of 10) intron (NM_015203, intron 1 of 10) 41486 NM_015203 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding chr12-7204 chr12 50015811 50016021 + 6.25 0.000 intron (NM_001320005, intron 1 of 15) intron (NM_001320005, intron 1 of 15) 9578 NM_001319999 29127 Hs.505469 NM_013277 ENSG00000161800 RACGAP1 CYK4|HsCYK-4|ID-GAP|MgcRacGAP Rac GTPase activating protein 1 protein-coding chr21-1547 chr21 7949215 7949425 + 6.25 0.000 Intergenic (CATTC)n|Satellite|Satellite -119688 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chr6-8217 chr6 135713281 135713491 + 6.25 0.000 intron (NR_152842, intron 5 of 5) MLT1D|LTR|ERVL-MaLR -138315 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr8-7550 chr8 144598507 144598717 + 6.25 0.000 intron (NM_025251, intron 1 of 10) L1MC5|LINE|L1 7083 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr7-2005 chr7 30619625 30619835 + 6.25 0.000 intron (NM_002047, intron 10 of 16) intron (NM_002047, intron 10 of 16) 24852 NM_002047 2617 Hs.404321 NM_002047 ENSG00000106105 GARS CMT2D|DSMAV|GlyRS|HMN5|SMAD1 glycyl-tRNA synthetase protein-coding chr1-8789 chr1 1519867 1520077 + 6.25 0.000 intron (NM_001170536, intron 5 of 15) CpG 7442 NM_001170536 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr13-1707 chr13 91693575 91693785 + 6.25 0.000 exon (NM_004466, exon 3 of 8) exon (NM_004466, exon 3 of 8) 295059 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr15-2702 chr15 86086500 86086710 + 6.25 0.000 intron (NR_120368, intron 4 of 5) (TCTC)n|Simple_repeat|Simple_repeat 6985 NM_152336 123624 Hs.31795 NM_152336 ENSG00000273540 AGBL1 CCP4|FECD8 ATP/GTP binding protein like 1 protein-coding chr19-3791 chr19 3918422 3918632 + 6.25 0.000 intron (NM_033064, intron 10 of 12) AluJb|SINE|Alu -14576 NM_001289117 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr5-6149 chr5 38096741 38096951 + 6.25 0.000 intron (NR_147009, intron 2 of 2) (TATTT)n|Simple_repeat|Simple_repeat -51634 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA chr22-2196 chr22 47540297 47540507 + 6.25 0.000 Intergenic Intergenic -53291 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LINC01644 LL22NC03-75H12.2 long intergenic non-protein coding RNA 1644 ncRNA chr11-5788 chr11 5488155 5488365 + 6.25 0.000 promoter-TSS (NM_001005163) promoter-TSS (NM_001005163) -425 NM_001005163 390066 Hs.553734 NM_001005163 ENSG00000181609 OR52D1 OR11-43 olfactory receptor family 52 subfamily D member 1 protein-coding chr1-12910 chr1 114369953 114370163 + 6.25 0.000 Intergenic MER4-int|LTR|ERV1 141145 NM_033020 51592 Hs.26837 NM_015906 ENSG00000197323 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding chr9-6191 chr9 91700779 91700989 + 6.25 0.000 Intergenic L1MA9|LINE|L1 -64539 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr12-4693 chr12 48934359 48934569 + 6.25 0.000 Intergenic Intergenic -8917 NM_001143782 51303 Hs.655103 NM_016594 ENSG00000134285 FKBP11 FKBP19 FKBP prolyl isomerase 11 protein-coding chr9-8324 chr9 114820584 114820794 + 6.25 0.000 Intergenic L2b|LINE|L2 -14650 NM_005118 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr10-8235 chr10 73979733 73979943 + 6.25 0.000 Intergenic LTR16B2|LTR|ERVL -18276 NM_014000 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr5-6996 chr5 151628650 151628860 + 6.25 0.000 Intergenic Intergenic -48190 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr4-3207 chr4 29711282 29711492 + 6.25 0.000 Intergenic LTR79|LTR|ERVL 497095 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr11-8936 chr11 17812470 17812680 + 6.25 0.000 intron (NR_104040, intron 11 of 11) intron (NR_104040, intron 11 of 11) 76627 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr17-4755 chr17 42619484 42619694 + 6.25 0.000 Intergenic AluSx1|SINE|Alu 9906 NM_001070 7283 Hs.279669 NM_001070 ENSG00000131462 TUBG1 CDCBM4|GCP-1|TUBG|TUBGCP1 tubulin gamma 1 protein-coding chr5-8144 chr5 100551150 100551360 + 6.25 0.000 intron (NM_198507, intron 1 of 2) LTR16B1|LTR|ERVL 15881 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr6-5370 chr6 150848023 150848233 + 6.25 0.000 Intergenic AluSz|SINE|Alu -17551 NR_146719 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr7-5121 chr7 4829682 4829892 + 6.25 0.000 intron (NM_018059, intron 5 of 14) THE1B|LTR|ERVL-MaLR 7663 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr8-5493 chr8 53727758 53727968 + 6.25 0.000 intron (NM_213620, intron 13 of 13) L2b|LINE|L2 115179 NM_213620 51606 Hs.491737 NM_015941 ENSG00000047249 ATP6V1H CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase H+ transporting V1 subunit H protein-coding chr20-1426 chr20 37924508 37924718 + 6.25 0.000 intron (NM_080607, intron 1 of 3) intron (NM_080607, intron 1 of 3) 21486 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr6-8338 chr6 147412381 147412591 + 6.25 0.000 Intergenic L1MA9|LINE|L1 -96204 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr15-5198 chr15 94348248 94348458 + 6.25 0.000 intron (NM_018349, intron 7 of 21) (TCTCCC)n|Simple_repeat|Simple_repeat -7577 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr11-10641 chr11 126160638 126160848 + 6.25 0.000 Intergenic Intergenic 50907 NM_032795 84881 Hs.150458 NM_032795 ENSG00000165526 RPUSD4 - RNA pseudouridine synthase D4 protein-coding chr2-8140 chr2 82291691 82291901 + 6.25 0.000 Intergenic L1PA12|LINE|L1 -565007 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr21-1528 chr21 45674895 45675105 + 6.25 0.000 intron (NM_001348238, intron 2 of 16) intron (NM_001348238, intron 2 of 16) 6126 NM_001348242 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr8-4861 chr8 42425824 42426034 + 6.25 0.000 intron (NM_006749, intron 10 of 10) AluY|SINE|Alu 34049 NM_005662 7419 Hs.699301 NM_005662 ENSG00000078668 VDAC3 HD-VDAC3|VDAC-3 voltage dependent anion channel 3 protein-coding chr6-6585 chr6 139084069 139084279 + 6.25 0.000 Intergenic Intergenic -50906 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding chr7-9727 chr7 157177582 157177792 + 6.25 0.000 intron (NM_014671, intron 5 of 22) intron (NM_014671, intron 5 of 22) 38761 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr6-8092 chr6 125631237 125631447 + 6.25 0.000 Intergenic Intergenic -43011 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr2-5452 chr2 124483429 124483639 + 6.25 0.000 intron (NM_001367498, intron 7 of 23) intron (NM_001367498, intron 7 of 23) 458247 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr19-6587 chr19 23987663 23987873 + 6.25 0.000 Intergenic BSR/Beta|Satellite|Satellite -29815 NR_149007 100505851 Hs.190888 NR_149007 LOC100505851 - uncharacterized LOC100505851 ncRNA chr19-4906 chr19 41928897 41929107 + 6.25 0.000 promoter-TSS (NM_001365103) promoter-TSS (NM_001365103) 182 NR_135626 100505585 NR_135626 ENSG00000076928 LOC100505585 - uncharacterized LOC100505585 ncRNA chr10-3734 chr10 117168141 117168351 + 6.25 0.000 promoter-TSS (NR_037436) promoter-TSS (NR_037436) -472 NR_037436 100500893 NR_037436 ENSG00000266782 MIR3663 - microRNA 3663 ncRNA chr11-7978 chr11 9700673 9700883 + 6.25 0.000 intron (NM_001297714, intron 2 of 10) intron (NM_001297714, intron 2 of 10) 36701 NM_001297714 23075 Hs.153026 NM_015055 ENSG00000133789 SWAP70 HSPC321|SWAP-70 switching B cell complex subunit SWAP70 protein-coding chr6-2663 chr6 3227809 3228019 + 6.25 0.000 promoter-TSS (NM_178012) promoter-TSS (NM_178012) -261 NM_178012 347733 Hs.300701 NM_178012 ENSG00000137285 TUBB2B CDCBM7|PMGYSA|bA506K6.1 tubulin beta 2B class IIb protein-coding chr15-4607 chr15 60797420 60797630 + 6.25 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 115956 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr14-5379 chr14 103899864 103900074 + 6.25 0.000 Intergenic Intergenic 21560 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr4-7710 chr4 89336837 89337047 + 6.25 0.000 Intergenic LTR88a|LTR|Gypsy? -29142 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr9-6004 chr9 135042627 135042837 + 6.25 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -32773 NM_006334 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr1-6651 chr1 46039916 46040126 + 6.25 0.000 TTS (NM_001328653) TTS (NM_001328653) 90652 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr16-2962 chr16 9674254 9674464 + 6.25 0.000 Intergenic HERVH-int|LTR|ERV1 -218854 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr15-4389 chr15 42858710 42858920 + 6.25 0.000 intron (NM_173500, intron 3 of 14) L1MCa|LINE|L1 61963 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr1-14205 chr1 34626532 34626742 + 6.25 0.000 Intergenic LTR69|LTR|ERVL 43057 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr3-9820 chr3 74482857 74483067 + 6.25 0.000 intron (NM_020872, intron 3 of 21) intron (NM_020872, intron 3 of 21) 38178 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr9-5647 chr9 121547920 121548130 + 6.25 0.000 Intergenic Intergenic -19077 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr3-8738 chr3 196547306 196547516 + 6.25 0.000 Intergenic L1MC5a|LINE|L1 21143 NM_001345918 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr8-4804 chr8 5637372 5637582 + 6.25 0.000 Intergenic Intergenic -642563 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr22-1543 chr22 30555545 30555755 + 6.25 0.000 exon (NM_001318109, exon 3 of 3) exon (NM_001318109, exon 3 of 3) 5126 NM_001318113 9514 Hs.17958 NM_004861 ENSG00000128242 GAL3ST1 CST galactose-3-O-sulfotransferase 1 protein-coding chr10-5058 chr10 41860868 41861078 + 6.25 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 507072 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr16-5004 chr16 27434143 27434353 + 6.25 0.000 intron (NM_181079, intron 3 of 9) intron (NM_181079, intron 3 of 9) 6977 NM_021798 50615 Hs.210546 NM_021798 ENSG00000103522 IL21R CD360|IMD56|NILR interleukin 21 receptor protein-coding chr14-2810 chr14 22726263 22726473 + 6.25 0.000 Intergenic Intergenic -40320 NM_005015 5018 Hs.151134 NM_005015 ENSG00000155463 OXA1L OXA1 OXA1L mitochondrial inner membrane protein protein-coding chr9-7333 chr9 13707791 13708001 + 6.25 0.000 Intergenic Intergenic -220075 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr10-4099 chr10 65226620 65226830 + 6.25 0.000 Intergenic Intergenic -302207 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA chr4-5583 chr4 173491057 173491267 + 6.25 0.000 intron (NM_001329597, intron 1 of 3) intron (NM_001329597, intron 1 of 3) 28076 NM_001329597 11341 Hs.7122 NM_007281 ENSG00000164106 SCRG1 SCRG-1 stimulator of chondrogenesis 1 protein-coding chr8-5759 chr8 141539265 141539475 + 6.25 0.000 Intergenic Intergenic -32140 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chrX-4508 chrX 65744411 65744621 + 6.25 0.000 Intergenic MER41B|LTR|ERV1 76862 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr5-7517 chr5 36396698 36396908 + 6.25 0.000 Intergenic Intergenic -94901 NM_001323273 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr18-2669 chr18 52715970 52716180 + 6.25 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 375878 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr2-5056 chr2 1993771 1993981 + 6.25 0.000 intron (NM_015025, intron 5 of 24) L1ME3Cz|LINE|L1 -249361 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr7-5904 chr7 96558712 96558922 + 6.25 0.000 intron (NR_163950, intron 3 of 6) intron (NR_163950, intron 3 of 6) -55294 NM_001201450 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr17-5565 chr17 44866078 44866288 + 6.25 0.000 intron (NM_001142605, intron 12 of 26) intron (NM_001142605, intron 12 of 26) 18300 NR_073504 51751 Hs.151787 NM_016438 ENSG00000131097 HIGD1B CLST11240|CLST11240-15 HIG1 hypoxia inducible domain family member 1B protein-coding chr11-3558 chr11 43575559 43575769 + 6.25 0.000 Intergenic CpG -5730 NR_029697 406918 NR_029697 ENSG00000199077 MIR129-2 MIR-129b|MIRN129-2|mir-129-2 microRNA 129-2 ncRNA chr7-9526 chr7 139647933 139648143 + 6.25 0.000 intron (NM_001113239, intron 2 of 14) L2a|LINE|L2 124353 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr19-4418 chr19 3828496 3828706 + 6.25 0.000 intron (NM_015174, intron 5 of 18) intron (NM_015174, intron 5 of 18) -26802 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr3-6641 chr3 127665602 127665812 + 6.25 0.000 intron (NM_015720, intron 4 of 7) intron (NM_015720, intron 4 of 7) -7231 NR_033429 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr15-4977 chr15 79724510 79724720 + 6.25 0.000 Intergenic MLT1K-int|LTR|ERVL-MaLR 172382 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr15-4280 chr15 37100270 37100480 + 6.25 0.000 promoter-TSS (NM_172316) promoter-TSS (NM_172316) 174 NM_170674 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr13-3078 chr13 44197865 44198075 + 6.25 0.000 Intergenic Intergenic -1770 NR_107046 102465876 NR_107046 ENSG00000276319 MIR8079 hsa-mir-8079 microRNA 8079 ncRNA chr12-4231 chr12 108029282 108029492 + 6.25 0.000 Intergenic Intergenic -99901 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr12-8333 chr12 130948824 130949034 + 6.25 0.000 Intergenic LTR16E2|LTR|ERVL -4978 NM_198827 283383 Hs.719239 NM_198827 ENSG00000111452 ADGRD1 GPR133|PGR25 adhesion G protein-coupled receptor D1 protein-coding chr4-7815 chr4 99135205 99135415 + 6.25 0.000 intron (NR_037884, intron 2 of 9) AluJo|SINE|Alu 8988 NM_001306172 127 Hs.1219 NM_000670 ENSG00000198099 ADH4 ADH-2|HEL-S-4 alcohol dehydrogenase 4 (class II), pi polypeptide protein-coding GL000254.2-1 GL000254.2 1309031 1309241 + 6.25 0.000 NA NA NA NA chr4-6475 chr4 149475412 149475622 + 6.25 0.000 intron (NM_001363507, intron 12 of 13) L2a|LINE|L2 321222 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr7-8645 chr7 70645351 70645561 + 6.25 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -486688 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr22-3594 chr22 20100543 20100753 + 6.25 0.000 intron (NM_022720, intron 9 of 13) intron (NM_022720, intron 9 of 13) 14103 NR_106874 102465490 NR_106874 ENSG00000278278 MIR6816 hsa-mir-6816 microRNA 6816 ncRNA chr4-2025 chr4 3140148 3140358 + 6.25 0.000 intron (NM_002111, intron 21 of 66) AluSg4|SINE|Alu 65572 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr5-7689 chr5 55904243 55904453 + 6.25 0.000 intron (NM_001297572, intron 8 of 10) intron (NM_001297572, intron 8 of 10) 51026 NM_001242639 133396 Hs.55378 NM_139017 ENSG00000164509 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding chr5-8759 chr5 147362500 147362710 + 6.25 0.000 intron (NM_001112724, intron 8 of 12) MLT1A-int|LTR|ERVL-MaLR 91087 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr8-6532 chr8 68014227 68014437 + 6.25 0.000 intron (NM_024870, intron 1 of 39) intron (NM_024870, intron 1 of 39) 62286 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr19-5739 chr19 18340743 18340953 + 6.25 0.000 intron (NM_001329477, intron 1 of 3) CpG 250 NM_001329471 54858 Hs.131776 NM_017712 ENSG00000130517 PGPEP1 PAP-I|PGI|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding chr1-12223 chr1 209691986 209692196 + 6.25 0.000 intron (NM_181755, intron 1 of 6) intron (NM_181755, intron 1 of 6) 5911 NM_001206741 3290 Hs.195040 NM_005525 ENSG00000117594 HSD11B1 11-DH|11-beta-HSD1|CORTRD2|HDL|HSD11|HSD11B|HSD11L|SDR26C1 hydroxysteroid 11-beta dehydrogenase 1 protein-coding chr10-6512 chr10 62733107 62733317 + 6.25 0.000 Intergenic Intergenic -71508 NM_032804 84890 Hs.99821 NM_032804 ENSG00000181915 ADO C10orf22 2-aminoethanethiol dioxygenase protein-coding chr10-9172 chr10 129878882 129879092 + 6.25 0.000 intron (NM_001005463, intron 6 of 15) intron (NM_001005463, intron 6 of 15) -35613 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr14-3564 chr14 105257170 105257380 + 6.25 0.000 intron (NM_001242788, intron 2 of 16) intron (NM_001242788, intron 2 of 16) -7871 NM_001242789 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr7-8047 chr7 21909793 21910003 + 6.25 0.000 intron (NM_001127371, intron 2 of 8) intron (NM_001127371, intron 2 of 8) 36001 NM_018719 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr18-3397 chr18 61222419 61222629 + 6.25 0.000 Intergenic Intergenic -110906 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr2-7553 chr2 23836803 23837013 + 6.25 0.000 intron (NR_125717, intron 13 of 28) MER52A|LTR|ERV1 90215 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr2-10723 chr2 29347956 29348166 + 6.25 0.000 intron (NM_004304, intron 5 of 28) intron (NM_004304, intron 5 of 28) -124161 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr19-7025 chr19 50036891 50037101 + 6.25 0.000 intron (NM_015428, intron 2 of 4) MIRb|SINE|MIR 10991 NM_001308424 25888 Hs.440553 NM_015428 ENSG00000142528 ZNF473 ZFP100|ZN473 zinc finger protein 473 protein-coding chr14-1733 chr14 57674739 57674949 + 6.25 0.000 intron (NM_001352014, intron 1 of 9) LTR40b|LTR|ERVL -180987 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr1-15664 chr1 165617159 165617369 + 6.25 0.000 Intergenic Intergenic -13970 NM_004528 4259 Hs.191734 NM_004528 ENSG00000143198 MGST3 GST-III microsomal glutathione S-transferase 3 protein-coding chr7-5265 chr7 20454222 20454432 + 6.25 0.000 Intergenic Intergenic -122565 NR_110120 101927811 Hs.285724 NR_110119 ENSG00000271133 LOC101927811 - uncharacterized LOC101927811 ncRNA chr20-3531 chr20 874125 874335 + 6.25 0.000 intron (NM_001322809, intron 7 of 7) intron (NM_001322809, intron 7 of 7) 29587 NM_031424 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding chr16-3921 chr16 84239970 84240180 + 6.25 0.000 promoter-TSS (NM_172347) promoter-TSS (NM_172347) -325 NM_172347 93107 Hs.335877 NM_133490 ENSG00000168418 KCNG4 KV6.3|KV6.4 potassium voltage-gated channel modifier subfamily G member 4 protein-coding chr12-7393 chr12 57283470 57283680 + 6.25 0.000 intron (NM_001351215, intron 11 of 22) AluSx|SINE|Alu -32388 NM_001286257 246329 Hs.417595 NM_145064 ENSG00000185482 STAC3 MYPBB|NAM SH3 and cysteine rich domain 3 protein-coding chr1-8468 chr1 115069367 115069577 + 6.25 0.000 intron (NM_005725, intron 2 of 7) MLT1K|LTR|ERVL-MaLR 20028 NM_001308315 10100 Hs.310458 NM_005725 ENSG00000134198 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding chr15-4558 chr15 57510543 57510753 + 6.25 0.000 intron (NM_032866, intron 8 of 18) intron (NM_032866, intron 8 of 18) -81256 NR_104368 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr2-9962 chr2 6974427 6974637 + 6.25 0.000 intron (NM_001349186, intron 2 of 7) intron (NM_001349186, intron 2 of 7) 41448 NM_001349182 9781 Hs.22146 NM_014746 ENSG00000151692 RNF144A RNF144|UBCE7IP4|hUIP4 ring finger protein 144A protein-coding chr4-5960 chr4 165871246 165871456 + 6.25 0.000 Intergenic Intergenic -1886 NM_001204760 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr1-11582 chr1 203815884 203816094 + 6.25 0.000 intron (NM_014827, intron 4 of 19) intron (NM_014827, intron 4 of 19) 18466 NM_001174108 100381270 NM_001174108 ENSG00000257315 ZBED6 MGR zinc finger BED-type containing 6 protein-coding chr6-8553 chr6 162016760 162016970 + 6.25 0.000 intron (NM_013988, intron 2 of 8) intron (NM_013988, intron 2 of 8) 545888 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr1-16588 chr1 236366434 236366644 + 6.25 0.000 Intergenic L1MEc|LINE|L1 -27747 NM_145861 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr2-10143 chr2 74264439 74264649 + 6.25 0.000 intron (NM_133478, intron 9 of 30) MIRc|SINE|MIR 50481 NM_021196 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr15-4886 chr15 76141253 76141463 + 6.25 0.000 intron (NM_152335, intron 3 of 10) AluSz|SINE|Alu 40128 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr5-8072 chr5 95090440 95090650 + 6.25 0.000 intron (NM_024717, intron 1 of 22) intron (NM_024717, intron 1 of 22) -8679 NM_001297777 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr5-8893 chr5 155754439 155754649 + 6.25 0.000 Intergenic Intergenic -572213 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr4-7265 chr4 48139690 48139900 + 6.25 0.000 intron (NM_003215, intron 15 of 17) L1ME3G|LINE|L1 -5545 NM_003328 7294 Hs.479669 NM_003328 ENSG00000074966 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding chr16-5330 chr16 79506499 79506709 + 6.25 0.000 Intergenic Intergenic 94133 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr10-7421 chr10 5327487 5327697 + 6.25 0.000 Intergenic Intergenic -37374 NM_053049 114131 Hs.511775 NM_053049 ENSG00000178473 UCN3 SCP|SPC|UCNIII urocortin 3 protein-coding chr14-3595 chr14 37046760 37046970 + 6.25 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -94474 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr19-2914 chr19 1746782 1746992 + 6.25 0.000 Intergenic Intergenic -6619 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr11-3409 chr11 8019780 8019990 + 6.25 0.000 Intergenic CpG -3376 NR_125366 103581031 Hs.249366 NR_125366 ENSG00000255420 CASC23 LINC01464 cancer susceptibility 23 ncRNA chr22-4097 chr22 43372992 43373202 + 6.25 0.000 Intergenic Tigger17c|DNA|TcMar-Tigger -27234 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr14-3489 chr14 102513112 102513322 + 6.25 0.000 Intergenic Intergenic -3441 NM_001348652 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr5-7314 chr5 15646452 15646662 + 6.25 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -31555 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr4-6671 chr4 2544786 2544996 + 6.25 0.000 intron (NM_001366318, intron 1 of 20) intron (NM_001366318, intron 1 of 20) 8244 NM_001366318 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr3-10155 chr3 115523737 115523947 + 6.25 0.000 Intergenic Intergenic -99668 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr12-7243 chr12 51533089 51533299 + 6.25 0.000 Intergenic AluJb|SINE|Alu -58039 NM_001330260 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr4-5528 chr4 108749922 108750132 + 6.25 0.000 intron (NM_031279, intron 7 of 12) intron (NM_031279, intron 7 of 12) 13026 NM_001146590 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr11-9946 chr11 76418029 76418239 + 6.25 0.000 Intergenic AluJb|SINE|Alu -26884 NM_001300943 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding chr7-8453 chr7 47924165 47924375 + 6.25 0.000 intron (NM_138295, intron 7 of 56) LTR8B|LTR|ERV1 24221 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr14-2851 chr14 30078495 30078705 + 6.25 0.000 Intergenic Intergenic -150753 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr5-6807 chr5 99607209 99607419 + 6.25 0.000 Intergenic Intergenic 73324 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr2-10624 chr2 10762795 10763005 + 6.25 0.000 intron (NM_001039362, intron 4 of 13) intron (NM_001039362, intron 4 of 13) 41270 NM_001039362 245973 Hs.580464 NM_144583 ENSG00000143882 ATP6V1C2 ATP6C2|VMA5 ATPase H+ transporting V1 subunit C2 protein-coding chr10-4066 chr10 41909351 41909561 + 6.25 0.000 Intergenic (AATGG)n|Simple_repeat|Simple_repeat 458589 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr9-6723 chr9 7789149 7789359 + 6.25 0.000 Intergenic HERVL18-int|LTR|ERVL 10524 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr11-9016 chr11 25350045 25350255 + 6.25 0.000 Intergenic L1PA15|LINE|L1 -838973 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr4-7563 chr4 78557143 78557353 + 6.25 0.000 intron (NM_005139, intron 2 of 12) MLT1E2|LTR|ERVL-MaLR 5478 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr5-5976 chr5 122053968 122054178 + 6.25 0.000 Intergenic L1PA15|LINE|L1 23101 NM_001317073 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr3-10938 chr3 174922098 174922308 + 6.25 0.000 intron (NM_207015, intron 1 of 13) AluJr|SINE|Alu 62869 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr1-5645 chr1 26190133 26190343 + 6.25 0.000 promoter-TSS (NM_198137) promoter-TSS (NM_198137) -390 NM_198137 378807 Hs.123532 NM_198137 ENSG00000188782 CATSPER4 - cation channel sperm associated 4 protein-coding chr5-3787 chr5 74462148 74462358 + 6.25 0.000 intron (NR_126354, intron 2 of 2) intron (NR_126354, intron 2 of 2) 74723 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA chr2-11774 chr2 13194075 13194285 + 6.25 0.000 Intergenic Intergenic -187167 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr16-5797 chr16 89453087 89453297 + 6.25 0.000 intron (NR_110932, intron 2 of 2) intron (NR_110932, intron 2 of 2) 22274 NR_110932 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr1-15570 chr1 159436845 159437055 + 6.25 0.000 intron (NM_001363557, intron 4 of 4) L2b|LINE|L2 -2772 NM_012351 26476 Hs.532661 NM_012351 ENSG00000196184 OR10J1 HGMP07J|HSHGMP07J olfactory receptor family 10 subfamily J member 1 protein-coding chr4-4546 chr4 71896885 71897095 + 6.25 0.000 Intergenic L1PA8|LINE|L1 -91470 NM_001204306 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr1-13860 chr1 20718028 20718238 + 6.25 0.000 promoter-TSS (NM_001287212) promoter-TSS (NM_001287212) -126 NM_001122819 57576 Hs.130411 NM_020816 ENSG00000117245 KIF17 KIF17B|KIF3X|KLP-2|OSM-3 kinesin family member 17 protein-coding chr22-3478 chr22 44304274 44304484 + 6.25 0.000 intron (NM_001099294, intron 1 of 4) intron (NM_001099294, intron 1 of 4) 8572 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr7-7815 chr7 2541906 2542116 + 6.25 0.000 intron (NR_146879, intron 7 of 14) intron (NR_146879, intron 7 of 14) 13513 NM_152743 221927 Hs.520623 NM_152743 ENSG00000106009 BRAT1 BAAT1|C7orf27|NEDCAS|RMFSL BRCA1 associated ATM activator 1 protein-coding chr16-3370 chr16 56592051 56592261 + 6.25 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 2628 NM_005954 4504 Hs.73133 NM_005954 ENSG00000087250 MT3 GIF|GIFB|GRIF|ZnMT3 metallothionein 3 protein-coding chr12-7777 chr12 96109185 96109395 + 6.25 0.000 Intergenic LTR12C|LTR|ERV1 -65770 NM_001256643 4048 Hs.524648 NM_000895 ENSG00000111144 LTA4H - leukotriene A4 hydrolase protein-coding chr5-8787 chr5 149144179 149144389 + 6.25 0.000 intron (NM_001370418, intron 1 of 18) intron (NM_001370418, intron 1 of 18) 2553 NM_001370418 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr4-2058 chr4 10457277 10457487 + 6.25 0.000 promoter-TSS (NM_053042) promoter-TSS (NM_053042) 44 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr12-6152 chr12 4702990 4703200 + 6.25 0.000 intron (NR_110112, intron 3 of 3) MLT1E2|LTR|ERVL-MaLR 17007 NR_110112 101929549 Hs.663336 NR_110112 ENSG00000255474 GAU1 GALNT8-DT GALNT8 antisense upstream 1 ncRNA chr5-4214 chr5 125123996 125124206 + 6.25 0.000 intron (NR_109882, intron 2 of 5) AluSz|SINE|Alu 87270 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr7-6018 chr7 106260139 106260349 + 6.25 0.000 intron (NM_005746, intron 8 of 10) Tigger1|DNA|TcMar-Tigger 24739 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr18-1629 chr18 51135596 51135806 + 6.25 0.000 Intergenic MER44B|DNA|TcMar-Tigger 61980 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr6-8532 chr6 160399967 160400177 + 6.25 0.000 intron (NM_021977, intron 2 of 10) L1MC1|LINE|L1 51694 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr13-4456 chr13 112807947 112808157 + 6.25 0.000 intron (NM_032189, intron 4 of 28) GA-rich|Low_complexity|Low_complexity -53321 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr12-4075 chr12 54121431 54121641 + 6.25 0.000 non-coding (NR_026655, exon 2 of 2) non-coding (NR_026655, exon 2 of 2) -4535 NR_026656 400043 Hs.19193 NR_026656 ENSG00000250742 LINC02381 - long intergenic non-protein coding RNA 2381 ncRNA chr7-5127 chr7 5120521 5120731 + 6.25 0.000 TTS (NR_034163) TTS (NR_034163) 23920 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr11-9204 chr11 37609845 37610055 + 6.25 0.000 Intergenic Intergenic -328651 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chrX-976 chrX 140210379 140210589 + 6.25 0.000 Intergenic MSTA|LTR|ERVL-MaLR 118817 NM_001271560 389895 Hs.127679 NM_001271560 LOC389895 - chromosome 16 open reading frame 72-like protein-coding chr2-8306 chr2 105455975 105456185 + 6.25 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -17567 NM_001318897 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr2-9793 chr2 119460242 119460452 + 6.25 0.000 intron (NM_002980, intron 7 of 12) intron (NM_002980, intron 7 of 12) -16107 NR_147846 107105282 Hs.670673 NR_147846 ENSG00000231013 LOC107105282 - uncharacterized LOC107105282 ncRNA chr7-9751 chr7 158783433 158783643 + 6.25 0.000 intron (NM_020728, intron 6 of 21) intron (NM_020728, intron 6 of 21) 45971 NM_001367773 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr12-6578 chr12 122155667 122155877 + 6.25 0.000 Intergenic Intergenic -11947 NM_152759 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr11-8356 chr11 81172271 81172481 + 6.25 0.000 Intergenic HERVL-int|LTR|ERVL -409573 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chrX-2432 chrX 78344869 78345079 + 6.25 0.000 Intergenic L1P2|LINE|L1 -17283 NM_001282186 10800 Hs.733809 NM_006639 ENSG00000173198 CYSLTR1 CYSLT1|CYSLT1R|CYSLTR|HMTMF81 cysteinyl leukotriene receptor 1 protein-coding chr2-13768 chr2 170972509 170972719 + 6.25 0.000 Intergenic L4_B_Mam|LINE|RTE-X 43361 NM_015530 26003 Hs.431317 NM_015530 ENSG00000115806 GORASP2 GOLPH6|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding chr1-10511 chr1 167035499 167035709 + 6.25 0.000 Intergenic L2a|LINE|L2 46324 NM_032858 84944 Hs.651245 NM_032858 ENSG00000143194 MAEL CT128|SPATA35 maelstrom spermatogenic transposon silencer protein-coding chr2-6717 chr2 27257112 27257322 + 6.25 0.000 exon (NM_001318950, exon 6 of 9) exon (NM_001318950, exon 6 of 9) 5830 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr11-3469 chr11 74926360 74926570 + 6.25 0.000 intron (NM_001270380, intron 7 of 14) Tigger12A|DNA|TcMar-Tigger 22626 NM_001270380 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr16-3755 chr16 23537366 23537576 + 6.25 0.000 intron (NM_001083614, intron 3 of 8) intron (NM_001083614, intron 3 of 8) 19879 NM_001083614 124454 Hs.620541 NM_001083614 ENSG00000103356 EARS2 COXPD12|MSE1|gluRS|mtGlnRS glutamyl-tRNA synthetase 2, mitochondrial protein-coding chr3-9232 chr3 38216926 38217136 + 6.25 0.000 intron (NM_005109, intron 5 of 17) L1MEg|LINE|L1 -48781 NM_004256 9390 Hs.225941 NM_004256 ENSG00000172940 SLC22A13 OAT10|OCTL1|OCTL3|ORCTL-3|ORCTL3 solute carrier family 22 member 13 protein-coding chr8-6344 chr8 51841044 51841254 + 6.25 0.000 intron (NM_001286783, intron 2 of 5) MIR|SINE|MIR -31704 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr21-1756 chr21 35423649 35423859 + 6.25 0.000 intron (NR_073512, intron 2 of 2) intron (NR_073512, intron 2 of 2) 157010 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr10-9127 chr10 127633267 127633477 + 6.25 0.000 Intergenic L1MA4A|LINE|L1 84023 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr13-3328 chr13 63137942 63138152 + 6.25 0.000 Intergenic L2|LINE|L2 190047 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr8-4885 chr8 71222964 71223174 + 6.25 0.000 intron (NM_001370336, intron 12 of 17) intron (NM_001370336, intron 12 of 17) 133637 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr3-4869 chr3 168605305 168605515 + 6.25 0.000 intron (NR_021485, intron 4 of 15) MamRep38|DNA|hAT 53556 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr15-4456 chr15 47470186 47470396 + 6.25 0.000 intron (NM_001198999, intron 2 of 19) intron (NM_001198999, intron 2 of 19) -247214 NM_001358352 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr1-14240 chr1 36538212 36538422 + 6.25 0.000 Intergenic Intergenic -55003 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr13-3241 chr13 30715979 30716189 + 6.25 0.000 intron (NM_001204406, intron 1 of 5) intron (NM_001204406, intron 1 of 5) 2606 NM_001204406 241 Hs.507658 NM_001629 ENSG00000132965 ALOX5AP FLAP arachidonate 5-lipoxygenase activating protein protein-coding chr12-7233 chr12 51149234 51149444 + 6.25 0.000 intron (NM_005653, intron 1 of 14) L1PB1|LINE|L1 23796 NM_001173452 7024 Hs.48849 NM_005653 ENSG00000135457 TFCP2 LBP1C|LSF|LSF1D|SEF|TFCP2C transcription factor CP2 protein-coding chr17-8337 chr17 73498233 73498443 + 6.25 0.000 intron (NM_001144952, intron 2 of 44) intron (NM_001144952, intron 2 of 44) -15345 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr5-8542 chr5 135549874 135550084 + 6.25 0.000 Intergenic Intergenic -14015 NM_006161 4762 Hs.248149 NM_006161 ENSG00000181965 NEUROG1 AKA|Math4C|NEUROD3|bHLHa6|ngn1 neurogenin 1 protein-coding chr17-4888 chr17 68843527 68843737 + 6.25 0.000 Intergenic Intergenic 111760 NM_007168 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr6-6462 chr6 108250606 108250816 + 6.25 0.000 intron (NM_001300929, intron 1 of 3) intron (NM_001300929, intron 1 of 3) 10329 NM_003795 8724 Hs.12102 NM_003795 ENSG00000112335 SNX3 Grd19|MCOPS8|SDP3 sorting nexin 3 protein-coding chr5-7863 chr5 72711493 72711703 + 6.25 0.000 Intergenic Intergenic -50929 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr11-7776 chr11 88629675 88629885 + 6.25 0.000 intron (NM_001143831, intron 3 of 8) intron (NM_001143831, intron 3 of 8) 125204 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr5-9042 chr5 169083666 169083876 + 6.25 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 70544 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr2-13469 chr2 146612576 146612786 + 6.25 0.000 Intergenic L1MA9|LINE|L1 25624 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr5-6991 chr5 150375037 150375247 + 6.25 0.000 exon (NM_001195141, exon 10 of 26) exon (NM_001195141, exon 10 of 26) 17445 NM_001135245 6949 Hs.519672 NM_000356 ENSG00000070814 TCOF1 MFD1|TCS|TCS1|treacle treacle ribosome biogenesis factor 1 protein-coding chrX-2112 chrX 26622406 26622616 + 6.25 0.000 Intergenic MER87|LTR|ERV1 64174 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr9-4500 chr9 38253781 38253991 + 6.25 0.000 Intergenic MIRc|SINE|MIR -138816 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr2-6625 chr2 239601342 239601552 + 6.25 0.000 Intergenic Intergenic -161413 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr4-7946 chr4 109803108 109803318 + 6.25 0.000 promoter-TSS (NM_000204) promoter-TSS (NM_000204) -988 NM_000204 3426 Hs.312485 NM_000204 ENSG00000205403 CFI AHUS3|ARMD13|C3BINA|C3b-INA|FI|IF|KAF complement factor I protein-coding chr1-5664 chr1 34565879 34566089 + 6.25 0.000 Intergenic L2a|LINE|L2 103710 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr7-4149 chr7 80783820 80784030 + 6.25 0.000 intron (NM_006379, intron 12 of 17) intron (NM_006379, intron 12 of 17) 135126 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr1-13085 chr1 181673218 181673428 + 6.25 0.000 intron (NM_001205293, intron 7 of 47) intron (NM_001205293, intron 7 of 47) 189806 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr8-3434 chr8 81069783 81069993 + 6.25 0.000 intron (NM_018440, intron 2 of 8) intron (NM_018440, intron 2 of 8) 42180 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr18-2381 chr18 75213547 75213757 + 6.25 0.000 intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 2123 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr4-5270 chr4 173786145 173786355 + 6.25 0.000 Intergenic L1PA4|LINE|L1 -111023 NR_146487 101928478 NR_146487 ENSG00000250708 LINC02269 - long intergenic non-protein coding RNA 2269 ncRNA chr6-4861 chr6 87831940 87832150 + 6.25 0.000 intron (NR_110869, intron 2 of 4) intron (NR_110869, intron 2 of 4) 47185 NR_110869 101928911 Hs.571178 NR_110869 LOC101928911 - uncharacterized LOC101928911 ncRNA chr11-9010 chr11 24828554 24828764 + 6.25 0.000 intron (NM_001252010, intron 5 of 9) intron (NM_001252010, intron 5 of 9) 331606 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr20-2499 chr20 33400772 33400982 + 6.25 0.000 intron (NM_001365728, intron 1 of 14) MIRb|SINE|MIR 642 NM_016408 51654 Hs.435952 NM_016082 ENSG00000101391 CDK5RAP1 C20orf34|C42|CGI-05|HSPC167 CDK5 regulatory subunit associated protein 1 protein-coding chr7-9247 chr7 122093168 122093378 + 6.25 0.000 intron (NM_005763, intron 15 of 23) intron (NM_005763, intron 15 of 23) 50976 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr12-7884 chr12 106512761 106512971 + 6.25 0.000 intron (NR_040246, intron 1 of 3) MLT1B|LTR|ERVL-MaLR -70041 NM_213594 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr3-6088 chr3 52360919 52361129 + 6.25 0.000 intron (NM_015512, intron 28 of 77) intron (NM_015512, intron 28 of 77) 44705 NM_015512 25981 Hs.655469 NM_015512 ENSG00000114841 DNAH1 CILD37|DNAHC1|HDHC7|HL-11|HL11|HSRF-1|SPGF18|XLHSRF-1 dynein axonemal heavy chain 1 protein-coding chr7-8792 chr7 82203906 82204116 + 6.25 0.000 intron (NM_000722, intron 3 of 38) HERVL18-int|LTR|ERVL 194834 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr2-7249 chr2 229222919 229223129 + 6.25 0.000 intron (NM_001100818, intron 1 of 2) L1ME4c|LINE|L1 9068 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr3-11020 chr3 181468283 181468493 + 6.25 0.000 intron (NR_075091, intron 3 of 7) MER21C|LTR|ERVL -25902 NR_125407 102724604 Hs.570524 NR_125407 ENSG00000241231 LOC102724604 - uncharacterized LOC102724604 ncRNA chr14-4940 chr14 74258643 74258853 + 6.25 0.000 intron (NM_182894, intron 3 of 4) intron (NM_182894, intron 3 of 4) 19299 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr17-7389 chr17 8045374 8045584 + 6.25 0.000 intron (NM_001039130, intron 7 of 12) intron (NM_001039130, intron 7 of 12) 6420 NM_001039131 247 Hs.111256 NM_001141 ENSG00000179593 ALOX15B 15-LOX-2 arachidonate 15-lipoxygenase type B protein-coding chr12-4616 chr12 40705710 40705920 + 6.25 0.000 intron (NM_001256063, intron 1 of 15) MSTA|LTR|ERVL-MaLR 13373 NM_001256063 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr1-11732 chr1 14710617 14710827 + 6.25 0.000 intron (NM_201628, intron 1 of 14) L2a|LINE|L2 112005 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr6-7812 chr6 100345974 100346184 + 6.25 0.000 Intergenic Intergenic 117596 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr19-5447 chr19 31099634 31099844 + 6.25 0.000 Intergenic Intergenic -67771 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chrX-3476 chrX 34969113 34969323 + 6.25 0.000 Intergenic MIR|SINE|MIR 26422 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr9-3623 chr9 90003907 90004117 + 6.25 0.000 Intergenic Intergenic 19523 NR_036253 100422963 NR_036253 ENSG00000263967 MIR4290 - microRNA 4290 ncRNA chr8-2999 chr8 103870004 103870214 + 6.25 0.000 intron (NR_145711, intron 1 of 21) intron (NR_145711, intron 1 of 21) 50889 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr16-2619 chr16 2325984 2326194 + 6.25 0.000 exon (NM_001089, exon 5 of 33) exon (NM_001089, exon 5 of 33) 14639 NM_001089 21 Hs.26630 NM_001089 ENSG00000167972 ABCA3 ABC-C|ABC3|EST111653|LBM180|SMDP3 ATP binding cassette subfamily A member 3 protein-coding chr4-2886 chr4 77436381 77436591 + 6.25 0.000 Intergenic L1MA7|LINE|L1 -75267 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr19-5219 chr19 33753679 33753889 + 6.25 0.000 intron (NM_001127895, intron 3 of 4) intron (NM_001127895, intron 3 of 4) -43086 NM_024076 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr17-8365 chr17 74328361 74328571 + 6.25 0.000 exon (NM_153209, exon 2 of 20) exon (NM_153209, exon 2 of 20) 2240 NM_153209 124602 Hs.372773 NM_153209 ENSG00000196169 KIF19 KIF19A kinesin family member 19 protein-coding chr17-2764 chr17 83052871 83053081 + 6.25 0.000 Intergenic Intergenic -1166 NM_001009905 146712 Hs.607824 NM_001009905 ENSG00000175711 B3GNTL1 3-Gn-T8|B3GNT8|BGnT-8|beta-1|beta3Gn-T8|beta3GnTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 protein-coding chr6-8622 chr6 170032226 170032436 + 6.25 0.000 Intergenic Intergenic 69708 NR_027434 100131532 Hs.703417 NR_027434 LOC100131532 - uncharacterized LOC100131532 ncRNA chr13-2953 chr13 45833688 45833898 + 6.25 0.000 intron (NM_198849, intron 1 of 1) MIRc|SINE|MIR 17960 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr9-6888 chr9 88503339 88503549 + 6.25 0.000 Intergenic Intergenic -31657 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr6-6721 chr6 1491090 1491300 + 6.25 0.000 Intergenic Intergenic -100784 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr15-1928 chr15 89358752 89358962 + 6.25 0.000 Intergenic CpG -2722 NR_133001 254559 Hs.136313 NR_015411 ENSG00000255571 MIR9-3HG LINC00925 MIR9-3 host gene ncRNA chr22-2457 chr22 20275611 20275821 + 6.25 0.000 Intergenic Intergenic -7398 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chr4-3408 chr4 55491552 55491762 + 6.25 0.000 intron (NM_004898, intron 2 of 22) L1M4c|LINE|L1 54275 NM_001267843 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr6-6767 chr6 3492283 3492493 + 6.25 0.000 Intergenic MER90|LTR|ERV1 -35829 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr18-2970 chr18 22815709 22815919 + 6.25 0.000 Intergenic MER52C|LTR|ERV1 -28977 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr10-8783 chr10 105711777 105711987 + 6.25 0.000 intron (NR_120625, intron 3 of 3) intron (NR_120625, intron 3 of 3) 108451 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr22-1798 chr22 32031733 32031943 + 6.25 0.000 intron (NR_149128, intron 4 of 4) intron (NR_149128, intron 4 of 4) -11423 NM_000343 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr2-10885 chr2 66068761 66068971 + 6.25 0.000 Intergenic Intergenic 289462 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr18-2834 chr18 6928119 6928329 + 6.25 0.000 intron (NR_034100, intron 2 of 6) LTR9|LTR|ERV1 1645 NR_034100 400643 Hs.253920 NM_001103383 ENSG00000265933 LINC00668 - long intergenic non-protein coding RNA 668 ncRNA chr12-7802 chr12 98297929 98298139 + 6.25 0.000 Intergenic MLT1M|LTR|ERVL-MaLR 159111 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr9-8397 chr9 119497961 119498171 + 6.25 0.000 Intergenic L1MA4|LINE|L1 -128631 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr17-5423 chr17 35053046 35053256 + 6.25 0.000 intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) 10556 NM_001017368 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr2-9623 chr2 8550585 8550795 + 6.25 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 33102 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr21-1385 chr21 43667663 43667873 + 6.25 0.000 intron (NM_015056, intron 1 of 15) intron (NM_015056, intron 1 of 15) 8208 NM_015056 23076 Hs.565725 NM_015056 ENSG00000160208 RRP1B KIAA0179|NNP1L|Nnp1|PPP1R136|RRP1 ribosomal RNA processing 1B protein-coding chrX-695 chrX 63189281 63189491 + 6.25 0.000 Intergenic SVA_F|Retroposon|SVA 161946 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr1-16372 chr1 221032755 221032965 + 6.25 0.000 Intergenic Intergenic -152720 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr10-7633 chr10 23631017 23631227 + 6.25 0.000 Intergenic L1M4|LINE|L1 -63605 NM_001098500 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr1-6216 chr1 212967788 212967998 + 6.25 0.000 intron (NM_001301056, intron 5 of 7) intron (NM_001301056, intron 5 of 7) 17352 NM_001136474 79805 Hs.96885 NM_024749 ENSG00000143494 VASH2 - vasohibin 2 protein-coding chr16-5044 chr16 60882954 60883164 + 6.25 0.000 Intergenic Intergenic 172707 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr5-8306 chr5 115461599 115461809 + 6.25 0.000 Intergenic Intergenic 83071 NM_020177 56929 Hs.47367 NM_020177 ENSG00000145780 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog C protein-coding chr11-7700 chr11 68938497 68938707 + 6.25 0.000 intron (NM_002180, intron 14 of 14) intron (NM_002180, intron 14 of 14) 34751 NM_002180 3508 Hs.503048 NM_002180 ENSG00000132740 IGHMBP2 CATF1|CMT2S|HCSA|HMN6|SMARD1|SMUBP2|ZFAND7 immunoglobulin mu DNA binding protein 2 protein-coding chr3-7547 chr3 188131082 188131292 + 6.25 0.000 Intergenic Intergenic -22711 NM_001167672 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr10-2285 chr10 14653976 14654186 + 6.25 0.000 intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) -49680 NM_001282697 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr8-6331 chr8 49945422 49945632 + 6.25 0.000 intron (NR_135798, intron 1 of 15) intron (NR_135798, intron 1 of 15) 34120 NR_135796 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr2-7678 chr2 30046342 30046552 + 6.25 0.000 Intergenic HAL1|LINE|L1 -100560 NM_016061 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr3-9327 chr3 45427020 45427230 + 6.25 0.000 intron (NM_001368263, intron 5 of 20) intron (NM_001368263, intron 5 of 20) 38549 NM_015340 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr15-1080 chr15 40924146 40924356 + 6.25 0.000 Intergenic Intergenic -5089 NM_019074 54567 Hs.511076 NM_019074 ENSG00000128917 DLL4 AOS6|delta4|hdelta2 delta like canonical Notch ligand 4 protein-coding chr8-5706 chr8 127043332 127043542 + 6.25 0.000 Intergenic Intergenic 30283 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr1-9039 chr1 12191043 12191253 + 6.25 0.000 promoter-TSS (NR_039775) promoter-TSS (NR_039775) -565 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr3-11171 chr3 190863847 190864057 + 6.25 0.000 Intergenic Intergenic -1258 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr18-3586 chr18 80185973 80186183 + 6.25 0.000 intron (NM_032510, intron 2 of 2) intron (NM_032510, intron 2 of 2) 38154 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr2-14203 chr2 208356673 208356883 + 6.25 0.000 3' UTR (NM_015040, exon 42 of 42) 3' UTR (NM_015040, exon 42 of 42) -2914 NM_001309516 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr2-12523 chr2 65501625 65501835 + 6.25 0.000 Intergenic Intergenic -69131 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2-11677 chr2 7772486 7772696 + 6.25 0.000 Intergenic MIR|SINE|MIR 127064 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr13-2998 chr13 100831603 100831813 + 6.25 0.000 intron (NR_047687, intron 2 of 7) intron (NR_047687, intron 2 of 7) 112656 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chrX-4068 chrX 20442703 20442913 + 6.25 0.000 Intergenic Intergenic -175899 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr9-4797 chr9 135450164 135450374 + 6.25 0.000 Intergenic Intergenic 21980 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr7-3953 chr7 130955135 130955345 + 6.25 0.000 intron (NR_024153, intron 3 of 4) intron (NR_024153, intron 3 of 4) 41776 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr1-6782 chr1 81998378 81998588 + 6.25 0.000 Intergenic Intergenic 196030 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr6-8434 chr6 152339992 152340202 + 6.25 0.000 intron (NM_182961, intron 74 of 145) L2a|LINE|L2 -40433 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr1-15130 chr1 102774881 102775091 + 6.25 0.000 Intergenic MER41A|LTR|ERV1 333510 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr1-5120 chr1 151963175 151963385 + 6.25 0.000 Intergenic Intergenic 30579 NM_002966 6281 Hs.143873 NM_002966 ENSG00000197747 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding chr21-842 chr21 14984147 14984357 + 6.25 0.000 intron (NM_003489, intron 3 of 3) Tigger1|DNA|TcMar-Tigger -65584 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chrX-2895 chrX 149121019 149121229 + 6.25 0.000 Intergenic Intergenic 384182 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr2-10951 chr2 84180261 84180471 + 6.25 0.000 Intergenic LTR85b|LTR|Gypsy? -110316 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr19-6037 chr19 2139154 2139364 + 6.25 0.000 intron (NM_003938, intron 1 of 29) L1MB5|LINE|L1 12307 NM_003938 8943 Hs.512815 NM_003938 ENSG00000065000 AP3D1 ADTD|HPS10|hBLVR adaptor related protein complex 3 subunit delta 1 protein-coding chrX-4362 chrX 48988140 48988350 + 6.25 0.000 intron (NM_020137, intron 11 of 25) intron (NM_020137, intron 11 of 25) 14019 NM_020137 56850 Hs.109929 NM_020137 ENSG00000068400 GRIPAP1 GRASP-1 GRIP1 associated protein 1 protein-coding chrX-2343 chrX 63904701 63904911 + 6.25 0.000 Intergenic L1P1|LINE|L1 -118719 NR_031567 100302115 NR_031567 ENSG00000222532 MIR1468 MIRN1468|hsa-mir-1468|mir-1468 microRNA 1468 ncRNA chr3-8512 chr3 133959356 133959566 + 6.25 0.000 intron (NM_005630, intron 3 of 13) L1MB3|LINE|L1 -29649 NR_161373 80111 Hs.287691 NM_025041 ENSG00000174640 C3orf36 - chromosome 3 open reading frame 36 ncRNA chr18-3076 chr18 32577156 32577366 + 6.25 0.000 Intergenic Intergenic 65598 NR_003558 441818 Hs.549773 NR_003558 ENSG00000260389 WBP11P1 HsT3017 WW domain binding protein 11 pseudogene 1 pseudo chr9-6331 chr9 3193837 3194047 + 6.25 0.000 intron (NR_121585, intron 3 of 4) MIRb|SINE|MIR 12353 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr19-2963 chr19 13209466 13209676 + 6.25 0.000 intron (NM_023035, intron 44 of 46) intron (NM_023035, intron 44 of 46) 59160 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr14-2746 chr14 100826651 100826861 + 6.25 0.000 intron (NR_033360, intron 1 of 6) CpG 624 NR_003531 55384 Hs.654863 NR_002766 ENSG00000214548 MEG3 FP504|GTL2|LINC00023|NCRNA00023|PRO0518|PRO2160|onco-lncRNA-83|prebp1 maternally expressed 3 ncRNA chr19-5723 chr19 16513529 16513739 + 6.25 0.000 intron (NM_032207, intron 6 of 8) AluSx1|SINE|Alu 17240 NM_032207 84167 Hs.631627 NM_032207 ENSG00000105072 C19orf44 - chromosome 19 open reading frame 44 protein-coding chr20-2362 chr20 16386357 16386567 + 6.25 0.000 intron (NM_001199866, intron 17 of 22) L2b|LINE|L2 186986 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr6-5176 chr6 129088922 129089132 + 6.25 0.000 intron (NM_000426, intron 3 of 64) SVA_C|Retroposon|SVA 205886 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr14-4802 chr14 66475525 66475735 + 6.25 0.000 Intergenic Intergenic -10741 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr12-3951 chr12 6250453 6250663 + 6.25 0.000 Intergenic LTR105_Mam|LTR|ERVL 50158 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr16-5499 chr16 11514721 11514931 + 6.25 0.000 intron (NM_001370704, intron 6 of 66) intron (NM_001370704, intron 6 of 66) 12421 NM_001370704 400499 Hs.459937 NM_001370704 ENSG00000188897 LOC400499 - putative uncharacterized protein LOC400499 protein-coding chr3-7966 chr3 171428649 171428859 + 6.25 0.000 intron (NM_001161563, intron 1 of 31) intron (NM_001161563, intron 1 of 31) 31651 NM_001161566 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr4-6592 chr4 749712 749922 + 6.25 0.000 intron (NM_001317836, intron 9 of 11) intron (NM_001317836, intron 9 of 11) 32031 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr2-12826 chr2 95017887 95018097 + 6.25 0.000 Intergenic Intergenic -7663 NM_022438 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr14-3773 chr14 54412274 54412484 + 6.25 0.000 intron (NM_001330173, intron 5 of 8) AluJb|SINE|Alu 15372 NM_005192 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr10-6733 chr10 127923141 127923351 + 6.25 0.000 intron (NM_001323356, intron 1 of 19) intron (NM_001323356, intron 1 of 19) 16143 NM_001316676 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr8-4051 chr8 62147323 62147533 + 6.25 0.000 Intergenic L1M2|LINE|L1 -101426 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr2-4974 chr2 199085040 199085250 + 6.25 0.000 Intergenic AluSq2|SINE|Alu 372794 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr17-7511 chr17 17204162 17204372 + 6.25 0.000 intron (NM_178836, intron 1 of 1) intron (NM_178836, intron 1 of 1) 2066 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr20-1410 chr20 32463901 32464111 + 6.25 0.000 intron (NM_001351680, intron 2 of 8) intron (NM_001351680, intron 2 of 8) 19484 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr10-8663 chr10 100521792 100522002 + 6.25 0.000 Intergenic L2a|LINE|L2 -2036 NM_015490 25956 Hs.18889 NM_015490 ENSG00000075826 SEC31B SEC31B-1|SEC31L2 SEC31 homolog B, COPII coat complex component protein-coding chr19-5801 chr19 35977779 35977989 + 6.25 0.000 Intergenic Intergenic -17304 NM_001042631 644096 Hs.356460 NM_001042631 ENSG00000205138 SDHAF1 LYRM8 succinate dehydrogenase complex assembly factor 1 protein-coding chrX-4660 chrX 81014804 81015014 + 6.25 0.000 Intergenic L1PA8|LINE|L1 187004 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr14-3178 chr14 70700400 70700610 + 6.25 0.000 intron (NR_125769, intron 2 of 3) intron (NR_125769, intron 2 of 3) 1807 NR_125769 103695436 Hs.572296 NR_125769 ENSG00000258689 LINC01269 - long intergenic non-protein coding RNA 1269 ncRNA chr20-3859 chr20 25591570 25591780 + 6.25 0.000 Intergenic L1MD3|LINE|L1 -6144 NM_001318226 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr8-3770 chr8 24339846 24340056 + 6.25 0.000 intron (NM_014265, intron 15 of 22) intron (NM_014265, intron 15 of 22) -44334 NR_156422 27299 Hs.521459 NM_014479 ENSG00000134028 ADAMDEC1 M12.219 ADAM like decysin 1 protein-coding chr3-3372 chr3 46672159 46672369 + 6.25 0.000 intron (NR_135622, intron 21 of 24) intron (NR_135622, intron 21 of 24) 21415 NM_147129 259173 Hs.517937 NM_147129 ENSG00000178038 ALS2CL RN49018 ALS2 C-terminal like protein-coding chr11-6124 chr11 38905047 38905257 + 6.25 0.000 Intergenic L1PA16|LINE|L1 256294 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr1-5968 chr1 33255787 33255997 + 6.25 0.000 promoter-TSS (NM_152493) promoter-TSS (NM_152493) -600 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr7-8239 chr7 35315447 35315657 + 6.25 0.000 intron (NR_038864, intron 1 of 2) (TGG)n|Simple_repeat|Simple_repeat 1697 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr1-13092 chr1 182489563 182489773 + 6.25 0.000 intron (NM_001366934, intron 9 of 22) MIRb|SINE|MIR 39522 NM_001137669 353299 Hs.121200 NM_032267 ENSG00000121446 RGSL1 RGSL|RGSL2 regulator of G protein signaling like 1 protein-coding chr1-15695 chr1 168608856 168609066 + 6.25 0.000 Intergenic Intergenic 32356 NM_002995 6375 Hs.546295 NM_002995 ENSG00000143184 XCL1 ATAC|LPTN|LTN|SCM-1|SCM-1a|SCM1|SCM1A|SCYC1 X-C motif chemokine ligand 1 protein-coding chr8-6860 chr8 100062657 100062867 + 6.25 0.000 intron (NM_015668, intron 8 of 27) intron (NM_015668, intron 8 of 27) 42864 NM_001286693 26166 Hs.120021 NM_015668 ENSG00000132554 RGS22 CT145|PRTD-NY2 regulator of G protein signaling 22 protein-coding chr4-6889 chr4 13389049 13389259 + 6.25 0.000 intron (NM_001017979, intron 4 of 6) L1MB2|LINE|L1 95186 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr10-4215 chr10 120784369 120784579 + 6.25 0.000 intron (NR_033850, intron 1 of 2) MLT1B|LTR|ERVL-MaLR 66705 NR_033850 283089 Hs.568750 NR_033850 ENSG00000227165 WDR11-AS1 - WDR11 antisense RNA 1 ncRNA chr7-8614 chr7 68107391 68107601 + 6.25 0.000 Intergenic Intergenic 87243 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr4-7918 chr4 107425518 107425728 + 6.25 0.000 Intergenic Intergenic 294611 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chrX-5295 chrX 142272769 142272979 + 6.25 0.000 Intergenic HERVE_a-int|LTR|ERV1 -67584 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr20-2250 chr20 1941134 1941344 + 6.25 0.000 TTS (NM_080792) TTS (NM_080792) -5971 NR_134520 727993 Hs.551466 NR_134520 ENSG00000233896 PDYN-AS1 - PDYN antisense RNA 1 ncRNA chrX-3143 chrX 17154100 17154310 + 6.25 0.000 TTS (NM_004726) TTS (NM_004726) 207547 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr8-7362 chr8 136297386 136297596 + 6.25 0.000 Intergenic Intergenic -233307 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr9-6142 chr9 35552548 35552758 + 6.25 0.000 intron (NM_014806, intron 2 of 11) CR1-3_Croc|LINE|CR1 11225 NM_001287239 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr1-15836 chr1 180210279 180210489 + 6.25 0.000 Intergenic Intergenic -19880 NM_033343 89884 Hs.658487 NM_033343 ENSG00000121454 LHX4 CPHD4 LIM homeobox 4 protein-coding chr12-4245 chr12 112536612 112536822 + 6.25 0.000 Intergenic Intergenic -38519 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr11-9924 chr11 75599520 75599730 + 6.25 0.000 intron (NM_033063, intron 3 of 3) intron (NM_033063, intron 3 of 3) 16429 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr8-4237 chr8 89344105 89344315 + 6.25 0.000 Intergenic LTR33C|LTR|ERVL 413501 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chrX-3736 chrX 120408471 120408681 + 6.25 0.000 Intergenic LTR53-int|LTR|ERVL 46487 NM_001142447 23439 Hs.292599 NM_012069 ENSG00000101892 ATP1B4 - ATPase Na+/K+ transporting family member beta 4 protein-coding chr12-6421 chr12 80193125 80193335 + 6.25 0.000 intron (NM_001368062, intron 6 of 62) (TAAGAA)n|Simple_repeat|Simple_repeat -16223 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr7-8854 chr7 88759778 88759988 + 6.25 0.000 5' UTR (NM_181646, exon 1 of 4) 5' UTR (NM_181646, exon 1 of 4) 183 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chr3-8167 chr3 36562956 36563166 + 6.25 0.000 Intergenic Intergenic 176800 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr2-12715 chr2 79881711 79881921 + 6.25 0.000 intron (NM_001282598, intron 6 of 17) L1PA8A|LINE|L1 -15233 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr11-6642 chr11 75283413 75283623 + 6.25 0.000 intron (NM_004041, intron 4 of 15) intron (NM_004041, intron 4 of 15) 42744 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr16-5713 chr16 81881816 81882026 + 6.25 0.000 intron (NM_002661, intron 8 of 32) AluSx1|SINE|Alu 102630 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr3-8777 chr3 4421124 4421334 + 6.25 0.000 intron (NM_001164674, intron 2 of 7) MIRb|SINE|MIR 46040 NM_182760 285362 Hs.350475 NM_182760 ENSG00000144455 SUMF1 AAPA3037|FGE|UNQ3037 sulfatase modifying factor 1 protein-coding chr12-7841 chr12 102548494 102548704 + 6.25 0.000 Intergenic L2|LINE|L2 -68036 NM_000618 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr16-6214 chr16 28059726 28059936 + 6.25 0.000 intron (NM_001109763, intron 1 of 6) intron (NM_001109763, intron 1 of 6) 3883 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr10-8999 chr10 121307237 121307447 + 6.25 0.000 Intergenic LTR16E2|LTR|ERVL 223972 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr2-11919 chr2 24940259 24940469 + 6.25 0.000 Intergenic Intergenic -20127 NM_004036 109 Hs.467898 NM_004036 ENSG00000138031 ADCY3 AC-III|AC3|BMIQ19 adenylate cyclase 3 protein-coding chr6-7949 chr6 111517457 111517667 + 6.25 0.000 intron (NR_034109, intron 1 of 1) intron (NR_034109, intron 1 of 1) -33847 NM_001286432 5980 Hs.232021 NM_002912 ENSG00000009413 REV3L POLZ|REV3 REV3 like, DNA directed polymerase zeta catalytic subunit protein-coding chr14-3952 chr14 20697749 20697959 + 6.25 0.000 intron (NM_001282192, intron 2 of 2) intron (NM_001282192, intron 2 of 2) 9090 NM_194431 6038 Hs.283749 NM_002937 ENSG00000258818 RNASE4 RAB1|RNS4 ribonuclease A family member 4 protein-coding chr5-7676 chr5 54957922 54958132 + 6.25 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 27566 NM_001135604 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr5-6960 chr5 142301390 142301600 + 6.25 0.000 Intergenic Intergenic 16827 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr9-4275 chr9 105062300 105062510 + 6.25 0.000 Intergenic Intergenic -134250 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr8-5357 chr8 19274012 19274222 + 6.25 0.000 Intergenic Intergenic -28595 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr22-3140 chr22 24148625 24148835 + 6.25 0.000 intron (NM_012295, intron 29 of 36) Charlie15a|DNA|hAT-Charlie -32757 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr14-4374 chr14 26868787 26868997 + 6.25 0.000 Intergenic Intergenic -4241 NR_110041 101927081 Hs.97955 NR_110041 ENSG00000257612 MIR4307HG - MIR4307 host gene ncRNA chr3-3357 chr3 27782206 27782416 + 6.25 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -15277 NR_146630 105377007 NR_146630 LINC01980 - long intergenic non-protein coding RNA 1980 ncRNA chr14-4898 chr14 72523544 72523754 + 6.25 0.000 intron (NM_001370288, intron 15 of 16) intron (NM_001370288, intron 15 of 16) 6829 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr12-7631 chr12 80496344 80496554 + 6.25 0.000 exon (NM_001145026, exon 14 of 45) exon (NM_001145026, exon 14 of 45) 52214 NM_001145026 374462 Hs.539284 NM_001145026 ENSG00000139304 PTPRQ DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q protein tyrosine phosphatase receptor type Q protein-coding chr2-7389 chr2 7574965 7575175 + 6.25 0.000 Intergenic Intergenic 153809 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr16-5314 chr16 73456227 73456437 + 6.25 0.000 Intergenic Intergenic 69527 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr4-7898 chr4 105895784 105895994 + 6.25 0.000 intron (NM_001184692, intron 1 of 10) CpG 418 NM_001184692 255743 Hs.518921 NM_198278 ENSG00000168743 NPNT EGFL6L|POEM nephronectin protein-coding chr9-4578 chr9 92941227 92941437 + 6.25 0.000 Intergenic MER31A|LTR|ERV1 -6191 NM_001083536 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr4-6316 chr4 87785725 87785935 + 6.25 0.000 Intergenic Intergenic -13724 NM_004967 3381 Hs.518726 NM_004967 ENSG00000029559 IBSP BNSP|BSP|BSP-II|SP-II integrin binding sialoprotein protein-coding chr19-4698 chr19 18542322 18542532 + 6.25 0.000 intron (NM_012181, intron 1 of 8) intron (NM_012181, intron 1 of 8) 1146 NM_001308373 23770 Hs.173464 NM_012181 ENSG00000105701 FKBP8 FKBP38|FKBPr38 FKBP prolyl isomerase 8 protein-coding chr2-8599 chr2 139991369 139991579 + 6.25 0.000 Intergenic L1PA15|LINE|L1 595211 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr7-3124 chr7 45920956 45921166 + 6.25 0.000 exon (NM_000598, exon 1 of 5) exon (NM_000598, exon 1 of 5) 211 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr4-2505 chr4 26337564 26337774 + 6.25 0.000 intron (NM_001363577, intron 1 of 10) intron (NM_001363577, intron 1 of 10) 16441 NM_001363577 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr5-4142 chr5 88819261 88819471 + 6.25 0.000 intron (NM_001131005, intron 3 of 10) MIRb|SINE|MIR 4561 NM_001193348 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr2-14015 chr2 191352129 191352339 + 6.25 0.000 intron (NM_012223, intron 7 of 28) intron (NM_012223, intron 7 of 28) 106830 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr4-2989 chr4 119455744 119455954 + 6.25 0.000 intron (NR_037630, intron 1 of 8) intron (NR_037630, intron 1 of 8) 1066 NR_037630 645513 Hs.677546 NR_037630 ENSG00000245958 LOC645513 - septin 7 pseudogene pseudo chr3-7057 chr3 175073661 175073871 + 6.25 0.000 intron (NM_207015, intron 1 of 13) intron (NM_207015, intron 1 of 13) 41476 NR_046390 100862679 Hs.148810 NR_046390 ENSG00000230292 NAALADL2-AS3 - NAALADL2 antisense RNA 3 ncRNA chr5-3760 chr5 58563801 58564011 + 6.25 0.000 Intergenic SVA_A|Retroposon|SVA -5663 NR_109904 101928600 Hs.694699 NR_109904 ENSG00000250127 LINC02108 - long intergenic non-protein coding RNA 2108 ncRNA chr5-3996 chr5 18307673 18307883 + 6.25 0.000 Intergenic LTR104_Mam|LTR|Gypsy 500504 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr15-4691 chr15 65661013 65661223 + 6.25 0.000 TTS (NM_001301033) TTS (NM_001301033) 18239 NM_001254740 9187 Hs.173092 NM_004727 ENSG00000074621 SLC24A1 CSNB1D|HsT17412|NCKX|NCKX1|RODX solute carrier family 24 member 1 protein-coding chr7-3030 chr7 91752485 91752695 + 6.25 0.000 Intergenic L1PA8A|LINE|L1 128112 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr12-5644 chr12 70243646 70243856 + 6.25 0.000 promoter-TSS (NR_120460) promoter-TSS (NR_120460) 37 NM_001199303 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chrX-3547 chrX 63744846 63745056 + 6.25 0.000 intron (NM_001369036, intron 1 of 10) intron (NM_001369036, intron 1 of 10) 10172 NM_001369044 23229 Hs.54697 NM_015185 ENSG00000131089 ARHGEF9 COLLYBISTIN|EIEE8|HPEM-2|PEM-2|PEM2 Cdc42 guanine nucleotide exchange factor 9 protein-coding chr12-7536 chr12 70104889 70105099 + 6.25 0.000 Intergenic Intergenic -138036 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr6-6982 chr6 19023002 19023212 + 6.25 0.000 Intergenic Intergenic 157373 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr11-6545 chr11 69966673 69966883 + 6.25 0.000 Intergenic Intergenic 97146 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr2-7477 chr2 16075278 16075488 + 6.25 0.000 intron (NR_126559, intron 2 of 3) L1PA16|LINE|L1 24956 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA chr13-3502 chr13 20780015 20780225 + 6.25 0.000 3' UTR (NM_022459, exon 23 of 23) 3' UTR (NM_022459, exon 23 of 23) -6159 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chrX-2249 chrX 46788980 46789190 + 6.25 0.000 Intergenic LTR86C|LTR|ERVL -29967 NM_032591 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr10-8470 chr10 88455966 88456176 + 6.25 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 127247 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr6-7940 chr6 111029850 111030060 + 6.25 0.000 Intergenic Intergenic 17599 NR_002932 442245 Hs.551627 NR_002932 GSTM2P1 - glutathione S-transferase mu 2 pseudogene 1 pseudo chr1-6852 chr1 108705078 108705288 + 6.25 0.000 Intergenic LTR41C|LTR|ERVL -7725 NM_001144937 163479 Hs.258253 NM_173532 ENSG00000143107 FNDC7 - fibronectin type III domain containing 7 protein-coding chr1-13523 chr1 6121906 6122116 + 6.25 0.000 intron (NM_015557, intron 31 of 41) intron (NM_015557, intron 31 of 41) 58310 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr12-5799 chr12 16386192 16386402 + 6.25 0.000 Intergenic Intergenic 32880 NM_145764 4257 Hs.389700 NM_020300 ENSG00000008394 MGST1 GST12|MGST|MGST-I microsomal glutathione S-transferase 1 protein-coding chr4-8238 chr4 139024192 139024402 + 6.25 0.000 intron (NM_012118, intron 1 of 2) AluJr|SINE|Alu 8516 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chrX-3841 chrX 152928122 152928332 + 6.25 0.000 intron (NM_001178107, intron 11 of 22) intron (NM_001178107, intron 11 of 22) 10362 NM_001178113 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr11-8234 chr11 66209416 66209626 + 6.25 0.000 intron (NM_018026, intron 2 of 23) intron (NM_018026, intron 2 of 23) -47773 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr11-8910 chr11 16807020 16807230 + 6.25 0.000 intron (NM_001329630, intron 13 of 26) intron (NM_001329630, intron 13 of 26) 68478 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr1-14687 chr1 62290491 62290701 + 6.25 0.000 intron (NM_181712, intron 1 of 9) intron (NM_181712, intron 1 of 9) 28838 NM_181712 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chr2-12891 chr2 98711812 98712022 + 6.25 0.000 intron (NM_012214, intron 2 of 15) AluJb|SINE|Alu 19215 NM_012214 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding chr7-7659 chr7 149623800 149624010 + 6.25 0.000 intron (NR_027789, intron 1 of 8) intron (NR_027789, intron 1 of 8) 885 NR_027788 79970 Hs.520785 NM_024910 ENSG00000133624 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo chr7-2990 chr7 22549664 22549874 + 6.25 0.000 Intergenic CpG -13568 NR_038393 100506178 Hs.668122 NR_038393 ENSG00000232759 LOC100506178 - uncharacterized LOC100506178 ncRNA chr5-6975 chr5 147037331 147037541 + 6.25 0.000 intron (NM_181677, intron 2 of 10) (TATA)n|Simple_repeat|Simple_repeat 18701 NM_181676 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr18-2819 chr18 5632401 5632611 + 6.25 0.000 Intergenic Intergenic -3515 NM_001281535 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr12-6894 chr12 22672787 22672997 + 6.25 0.000 intron (NM_018638, intron 5 of 7) intron (NM_018638, intron 5 of 7) 47721 NM_001039481 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr6-6724 chr6 1552429 1552639 + 6.25 0.000 Intergenic ERVL-E-int|LTR|ERVL -52997 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript ncRNA chr2-9556 chr2 240124665 240124875 + 6.25 0.000 Intergenic Intergenic 11535 NM_001163424 150678 Hs.293884 NM_138336 ENSG00000172428 COPS9 CSNAP|MYEOV2 COP9 signalosome subunit 9 protein-coding chr1-14428 chr1 45238791 45239001 + 6.25 0.000 Intergenic L1ME2z|LINE|L1 -32291 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr10-7760 chr10 33734927 33735137 + 6.25 0.000 Intergenic (TTTCTT)n|Simple_repeat|Simple_repeat 37648 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr15-1722 chr15 100687447 100687657 + 6.25 0.000 Intergenic Intergenic 84963 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 - ankyrin repeat and SOCS box containing 7 protein-coding chr1-3979 chr1 155209060 155209270 + 6.25 0.000 exon (NM_198883, exon 1 of 7) exon (NM_198883, exon 1 of 7) 466 NM_002455 4580 Hs.490874 NM_002455 ENSG00000173171 MTX1 MTX|MTXN metaxin 1 protein-coding chr1-15210 chr1 110480825 110481035 + 6.25 0.000 intron (NR_003599, intron 1 of 8) intron (NR_003599, intron 1 of 8) 164 NR_003599 643160 Hs.532720 NR_003599 ENSG00000240194 CYMP - chymosin pseudogene pseudo chr2-6624 chr2 239426421 239426631 + 6.25 0.000 Intergenic Intergenic 24778 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr2-7001 chr2 142196799 142197009 + 6.25 0.000 Intergenic Intergenic -65203 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr1-15063 chr1 95430489 95430699 + 6.25 0.000 Intergenic Intergenic -44143 NR_033966 440594 Hs.514123 NR_033966 ENSG00000233907 LINC01761 - long intergenic non-protein coding RNA 1761 ncRNA chr7-5789 chr7 78680039 78680249 + 6.25 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -328844 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr2-10611 chr2 6483909 6484119 + 6.25 0.000 Intergenic (CTC)n|Simple_repeat|Simple_repeat -108592 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr5-8954 chr5 159820197 159820407 + 6.25 0.000 intron (NR_109891, intron 2 of 2) intron (NR_109891, intron 2 of 2) 51082 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr9-6316 chr9 137396680 137396890 + 6.25 0.000 intron (NM_001286823, intron 1 of 7) intron (NM_001286823, intron 1 of 7) 26377 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chrX-2797 chrX 133659424 133659634 + 6.25 0.000 intron (NM_001164619, intron 5 of 6) L2b|LINE|L2 -237914 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr2-9671 chr2 31124853 31125063 + 6.25 0.000 intron (NM_001329096, intron 2 of 16) intron (NM_001329096, intron 2 of 16) 4682 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr7-7634 chr7 138663550 138663760 + 6.25 0.000 intron (NM_001139456, intron 3 of 14) intron (NM_001139456, intron 3 of 14) 569 NM_001331192 136306 Hs.99414 NM_174959 ENSG00000157703 SVOPL - SVOP like protein-coding chr5-7289 chr5 14303994 14304204 + 6.25 0.000 intron (NM_007118, intron 7 of 56) intron (NM_007118, intron 7 of 56) -159884 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr5-7974 chr5 82799096 82799306 + 6.25 0.000 Intergenic Intergenic -40954 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr15-3219 chr15 73414588 73414798 + 6.25 0.000 Intergenic Intergenic -28471 NM_001042367 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chr1-9867 chr1 65729328 65729538 + 6.25 0.000 Intergenic Intergenic -63077 NM_001297440 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr6-6039 chr6 124443457 124443667 + 6.25 0.000 intron (NM_001300738, intron 4 of 7) ERV3-16A3_I-int|LTR|ERVL 160557 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr1-12509 chr1 22092296 22092506 + 6.25 0.000 3' UTR (NM_001791, exon 6 of 6) 3' UTR (NM_001791, exon 6 of 6) 39692 NM_044472 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr8-6653 chr8 79438018 79438228 + 6.25 0.000 Intergenic Intergenic 105935 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA chr6-5747 chr6 155245253 155245463 + 6.25 0.000 intron (NM_001010927, intron 4 of 12) intron (NM_001010927, intron 4 of 12) -18655 NM_001001346 49861 Hs.567491 NM_001001346 ENSG00000171217 CLDN20 - claudin 20 protein-coding chr1-14621 chr1 55607516 55607726 + 6.25 0.000 Intergenic THE1C|LTR|ERVL-MaLR 337342 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr7-9566 chr7 142030411 142030621 + 6.25 0.000 intron (NM_004668, intron 11 of 47) intron (NM_004668, intron 11 of 47) 34637 NM_004668 8972 Hs.122785 NM_004668 ENSG00000257335 MGAM MG|MGA maltase-glucoamylase protein-coding chr9-7606 chr9 37198069 37198279 + 6.25 0.000 intron (NM_001289120, intron 2 of 8) L2b|LINE|L2 77576 NM_001289121 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr16-5286 chr16 63221424 63221634 + 6.25 0.000 Intergenic MER4D1|LTR|ERV1 -1185091 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr22-2934 chr22 47284998 47285208 + 6.25 0.000 Intergenic Intergenic -60468 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr18-2918 chr18 12606991 12607201 + 6.25 0.000 intron (NM_020148, intron 2 of 15) intron (NM_020148, intron 2 of 15) 49636 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr7-4604 chr7 21384078 21384288 + 6.25 0.000 Intergenic AluJo|SINE|Alu -43900 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr17-4509 chr17 74433425 74433635 + 6.25 0.000 promoter-TSS (NM_018653) promoter-TSS (NM_018653) -167 NM_018653 55890 Hs.446438 NM_018653 ENSG00000170412 GPRC5C RAIG-3|RAIG3 G protein-coupled receptor class C group 5 member C protein-coding chr2-8243 chr2 98254454 98254664 + 6.25 0.000 intron (NM_001345864, intron 14 of 21) intron (NM_001345864, intron 14 of 21) -91596 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr5-6868 chr5 121459324 121459534 + 6.25 0.000 Intergenic LTR80B|LTR|ERVL 136879 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr7-7521 chr7 104253823 104254033 + 6.25 0.000 Intergenic Intergenic -45881 NM_181747 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chr7-3713 chr7 56367498 56367708 + 6.25 0.000 Intergenic Intergenic 80772 NR_029420 650226 Hs.448401 NR_029420 LOC650226 - ankyrin repeat domain 26 pseudogene pseudo chr1-12268 chr1 226800412 226800622 + 6.25 0.000 Intergenic Intergenic -61342 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chrX-3090 chrX 134529049 134529259 + 6.25 0.000 Intergenic LTR16E1|LTR|ERVL 11108 NR_030587 100126302 NR_030587 ENSG00000216001 MIR450B MIRN450B|mir-450b microRNA 450b ncRNA chrX-2387 chrX 70877161 70877371 + 6.25 0.000 intron (NM_001003811, intron 4 of 30) AluSz6|SINE|Alu -30971 NR_145758 109617015 NR_145758 ENSG00000280704 SNORD3E - small nucleolar RNA, C/D box 3E snoRNA chr10-4743 chr10 1694733 1694943 + 6.25 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) 42687 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr14-2470 chr14 90345988 90346198 + 6.25 0.000 Intergenic Intergenic -14152 NM_017970 55051 Hs.528131 NM_017970 ENSG00000119720 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding chr4-5314 chr4 181090832 181091042 + 6.25 0.000 intron (NR_033918, intron 2 of 2) Tigger1|DNA|TcMar-Tigger 68212 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr1-12252 chr1 220874116 220874326 + 6.25 0.000 intron (NR_046901, intron 1 of 2) intron (NR_046901, intron 1 of 2) -5222 NM_021958 3142 Hs.74870 NM_021958 ENSG00000136630 HLX HB24|HLX1 H2.0 like homeobox protein-coding chr3-11182 chr3 192789294 192789504 + 6.25 0.000 Intergenic LTR12C|LTR|ERV1 -61858 NM_004113 2257 Hs.390250 NM_004113 ENSG00000114279 FGF12 EIEE47|FGF12B|FHF1 fibroblast growth factor 12 protein-coding chr19-4767 chr19 31005404 31005614 + 6.25 0.000 Intergenic Intergenic -162001 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr14-2574 chr14 38647866 38648076 + 6.25 0.000 Intergenic Intergenic -234625 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr17-7620 chr17 27823760 27823970 + 6.25 0.000 Intergenic AluJr4|SINE|Alu -23336 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr8-6908 chr8 102245571 102245781 + 6.25 0.000 intron (NR_125415, intron 2 of 2) MLT1G3|LTR|ERVL-MaLR 6225 NR_125415 101927221 Hs.492445 NR_125415 ENSG00000246263 UBR5-AS1 - UBR5 antisense RNA 1 ncRNA chr11-10250 chr11 101401276 101401486 + 6.25 0.000 Intergenic L1PREC2|LINE|L1 118524 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chrX-2384 chrX 70321413 70321623 + 6.25 0.000 intron (NM_012310, intron 7 of 30) L2c|LINE|L2 31414 NM_012310 24137 Hs.648326 NM_012310 ENSG00000090889 KIF4A KIF4|KIF4G1|MRX100 kinesin family member 4A protein-coding chr10-8621 chr10 97929988 97930198 + 6.25 0.000 intron (NM_001206528, intron 3 of 14) MIRb|SINE|MIR -54196 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr8-6146 chr8 30575402 30575612 + 6.25 0.000 Intergenic Intergenic -63073 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr20-4224 chr20 47856344 47856554 + 6.25 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -69833 NM_001161841 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr3-8949 chr3 14653600 14653810 + 6.25 0.000 intron (NM_016474, intron 1 of 10) intron (NM_016474, intron 1 of 10) 1943 NM_016474 51244 Hs.517820 NM_016474 ENSG00000154781 CCDC174 C3orf19|HSPC212|IHPM|IHPMR coiled-coil domain containing 174 protein-coding chr3-10786 chr3 158977282 158977492 + 6.25 0.000 Intergenic L2b|LINE|L2 -91865 NM_001197114 100505385 Hs.134665 NM_001197113 ENSG00000283154 IQCJ-SCHIP1 - IQCJ-SCHIP1 readthrough protein-coding chr6-8580 chr6 165255252 165255462 + 6.25 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 54248 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr5-4369 chr5 171823841 171824051 + 6.25 0.000 Intergenic Intergenic 38074 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr11-1609 chr11 46238133 46238343 + 6.25 0.000 Intergenic CpG -39424 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chrX-3924 chrX 9596546 9596756 + 6.25 0.000 intron (NM_001139468, intron 3 of 17) MER20|DNA|hAT-Charlie 131593 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr11-4546 chr11 121328801 121329011 + 6.25 0.000 Intergenic Intergenic 36038 NM_001024956 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr1-10439 chr1 159557852 159558062 + 6.25 0.000 Intergenic Intergenic -21950 NM_001004469 127385 Hs.553587 NM_001004469 ENSG00000184155 OR10J5 OR1-28 olfactory receptor family 10 subfamily J member 5 protein-coding chr4-5504 chr4 82295538 82295748 + 6.25 0.000 Intergenic Intergenic 78348 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr8-4194 chr8 82859486 82859696 + 6.25 0.000 Intergenic THE1B|LTR|ERVL-MaLR -52513 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr15-4445 chr15 46454599 46454809 + 6.25 0.000 Intergenic Intergenic -729385 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr1-14837 chr1 76023761 76023971 + 6.25 0.000 Intergenic Intergenic 12542 NR_125939 101927342 Hs.216363 NR_125939 LOC101927342 - uncharacterized LOC101927342 ncRNA chrX-764 chrX 24311195 24311405 + 6.25 0.000 exon (NM_001136233, exon 1 of 1) exon (NM_001136233, exon 1 of 1) 2093 NM_001136233 170067 Hs.716893 NM_001136233 SUPT20HL2 FAM48B1|FAM48B2 SUPT20H like 2 protein-coding chr4-7224 chr4 42939938 42940148 + 6.25 0.000 intron (NM_001080476, intron 1 of 3) L1MCb|LINE|L1 46777 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr10-2885 chr10 103804159 103804369 + 6.25 0.000 intron (NM_014631, intron 1 of 13) MER4B|LTR|ERV1 51142 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr14-3670 chr14 95912635 95912845 + 6.25 0.000 intron (NR_132398, intron 2 of 2) intron (NR_132398, intron 2 of 2) 35968 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr17-6355 chr17 77862262 77862472 + 6.25 0.000 Intergenic Intergenic 21720 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr20-2405 chr20 19626983 19627193 + 6.25 0.000 intron (NM_020689, intron 6 of 16) intron (NM_020689, intron 6 of 16) -259433 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr3-7651 chr3 32862596 32862806 + 6.25 0.000 intron (NM_001039111, intron 1 of 3) intron (NM_001039111, intron 1 of 3) 44704 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr7-2440 chr7 129251146 129251356 + 6.25 0.000 intron (NM_001130720, intron 1 of 16) L2c|LINE|L2 26221 NM_015328 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr5-3805 chr5 83632998 83633208 + 6.25 0.000 Intergenic MER39|LTR|ERV1 -70789 NR_136215 105379054 Hs.643801 NR_136215 ENSG00000249835 VCAN-AS1 - VCAN antisense RNA 1 ncRNA chr1-7141 chr1 204788872 204789082 + 6.25 0.000 Intergenic Intergenic -39675 NM_001365986 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr3-7683 chr3 42043214 42043424 + 6.25 0.000 Intergenic Intergenic -43881 NR_146089 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr11-10242 chr11 100974934 100975144 + 6.25 0.000 intron (NM_001367945, intron 21 of 25) intron (NM_001367945, intron 21 of 25) 40765 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr8-2970 chr8 77309205 77309415 + 6.25 0.000 Intergenic Intergenic -141387 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr13-3263 chr13 38219422 38219632 + 6.25 0.000 Intergenic AluSg|SINE|Alu -76295 NR_047500 100874188 Hs.569249 NR_047500 ENSG00000223685 LINC00571 - long intergenic non-protein coding RNA 571 ncRNA chr1-9746 chr1 54446514 54446724 + 6.25 0.000 Intergenic L1PA5|LINE|L1 -40225 NM_018070 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr1-12735 chr1 60374114 60374324 + 6.25 0.000 Intergenic Intergenic 248466 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr13-1890 chr13 41696617 41696827 + 6.25 0.000 intron (NM_015058, intron 29 of 44) L2a|LINE|L2 -128327 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr17-6494 chr17 28450302 28450512 + 6.25 0.000 Intergenic Intergenic -23237 NM_001145975 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr17-8538 chr17 79435648 79435858 + 6.25 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 80395 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr22-2419 chr22 18964908 18965118 + 6.25 0.000 Intergenic Intergenic -5485 NR_045121 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr3-8190 chr3 40817374 40817584 + 6.25 0.000 Intergenic L1ME3Cz|LINE|L1 292519 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr4-6508 chr4 159740798 159741008 + 6.25 0.000 intron (NR_146278, intron 2 of 2) L1PB1|LINE|L1 36881 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr15-3815 chr15 74725954 74726164 + 6.25 0.000 promoter-TSS (NM_000499) promoter-TSS (NM_000499) -531 NM_001319216 1543 Hs.72912 NM_000499 ENSG00000140465 CYP1A1 AHH|AHRR|CP11|CYP1|CYPIA1|P1-450|P450-C|P450DX cytochrome P450 family 1 subfamily A member 1 protein-coding chr7-7554 chr7 117050125 117050335 + 6.25 0.000 intron (NR_161419, intron 1 of 15) AluSc8|SINE|Alu 30012 NM_001369606 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr2-12702 chr2 77752262 77752472 + 6.25 0.000 intron (NR_110288, intron 3 of 3) L1MEc|LINE|L1 -163567 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA chr6-6382 chr6 75723415 75723625 + 6.25 0.000 Intergenic Intergenic -25719 NM_004999 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr6-5872 chr6 40111051 40111261 + 6.25 0.000 Intergenic Intergenic -176694 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr16-6211 chr16 28010568 28010778 + 6.25 0.000 intron (NM_001109763, intron 1 of 6) intron (NM_001109763, intron 1 of 6) 53041 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr2-9135 chr2 209629368 209629578 + 6.25 0.000 intron (NM_001039538, intron 4 of 14) intron (NM_001039538, intron 4 of 14) 49794 NM_001363911 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr11-7409 chr11 95033384 95033594 + 6.25 0.000 Intergenic LTR16A|LTR|ERVL 8231 NM_001161630 390245 Hs.714692 NM_001161630 ENSG00000235268 KDM4E JMJD2E|KDM4DL|KDM5E lysine demethylase 4E protein-coding chr2-14761 chr2 240238437 240238647 + 6.25 0.000 Intergenic L1MC5a|LINE|L1 -97884 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr11-10282 chr11 104223934 104224144 + 6.25 0.000 Intergenic Intergenic -59892 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr14-4589 chr14 50353003 50353213 + 6.25 0.000 intron (NM_001282236, intron 3 of 8) MamRep605|LTR?|LTR? 40784 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr7-9165 chr7 113695061 113695271 + 6.25 0.000 Intergenic Intergenic 223843 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr12-5630 chr12 62686943 62687153 + 6.25 0.000 intron (NM_020700, intron 8 of 9) MLT1M|LTR|ERVL-MaLR 83362 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr7-7348 chr7 51512633 51512843 + 6.25 0.000 Intergenic AluSx|SINE|Alu -119482 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr11-8143 chr11 57822403 57822613 + 6.25 0.000 Intergenic L1MEd|LINE|L1 60706 NM_001206887 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr7-8242 chr7 35480399 35480609 + 6.25 0.000 Intergenic AluJr4|SINE|Alu 166649 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr13-2341 chr13 34617698 34617908 + 6.25 0.000 intron (NR_047036, intron 1 of 2) intron (NR_047036, intron 1 of 2) 22882 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr4-6293 chr4 82949734 82949944 + 6.25 0.000 intron (NM_001288996, intron 2 of 10) AluSz|SINE|Alu -48923 NR_034075 100499177 Hs.728916 NR_034075 ENSG00000251022 THAP9-AS1 - THAP9 antisense RNA 1 ncRNA chrX-1021 chrX 63393171 63393381 + 6.25 0.000 Intergenic SVA_D|Retroposon|SVA -41944 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr10-2465 chr10 21728776 21728986 + 6.25 0.000 intron (NM_001195626, intron 16 of 22) (T)n|Simple_repeat|Simple_repeat 194709 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr6-4284 chr6 13302754 13302964 + 6.25 0.000 intron (NR_134872, intron 5 of 7) intron (NR_134872, intron 5 of 7) -7273 NR_160971 100130357 Hs.484678 NM_001242698 LOC100130357 - uncharacterized LOC100130357 ncRNA chr2-3085 chr2 113720199 113720409 + 6.25 0.000 TTS (NR_039943) TTS (NR_039943) 1064 NR_039943 100616208 NR_039943 ENSG00000265429 MIR4782 - microRNA 4782 ncRNA chr11-4637 chr11 27910206 27910416 + 6.25 0.000 Intergenic AluJb|SINE|Alu -146504 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr5-9014 chr5 166099390 166099600 + 6.25 0.000 Intergenic Intergenic 826875 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr14-3656 chr14 82209255 82209465 + 6.25 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger -433272 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr22-1340 chr22 21597891 21598101 + 6.25 0.000 intron (NM_001256355, intron 2 of 3) AluJb|SINE|Alu 30282 NR_028436 7332 Hs.108104 NM_003347 ENSG00000185651 UBE2L3 E2-F1|L-UBC|UBCH7|UbcM4 ubiquitin conjugating enzyme E2 L3 protein-coding chr3-7487 chr3 149698504 149698714 + 6.25 0.000 intron (NM_001348362, intron 3 of 9) MSTB-int|LTR|ERVL-MaLR 4664 NM_001168278 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chrX-1406 chrX 15597639 15597849 + 6.25 0.000 intron (NM_021804, intron 2 of 18) intron (NM_021804, intron 2 of 18) 3216 NM_001371415 chr16-5666 chr16 69092642 69092852 + 6.25 0.000 Intergenic FLAM_A|SINE|Alu -12906 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr2-13587 chr2 157093196 157093406 + 6.25 0.000 Intergenic Intergenic -164404 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr2-13714 chr2 166950902 166951112 + 6.25 0.000 intron (NM_152381, intron 2 of 10) intron (NM_152381, intron 2 of 10) 62520 NM_001199143 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr6-4013 chr6 121401969 121402179 + 6.25 0.000 Intergenic Intergenic -33572 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr14-3955 chr14 21165473 21165683 + 6.25 0.000 Intergenic Intergenic -9515 NM_001004731 390445 Hs.553768 NM_001004731 ENSG00000169327 OR5AU1 OR14-38 olfactory receptor family 5 subfamily AU member 1 protein-coding chr21-1601 chr21 16608924 16609134 + 6.25 0.000 non-coding (NR_136542, exon 8 of 8) non-coding (NR_136542, exon 8 of 8) 18792 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr3-6443 chr3 104132624 104132834 + 6.25 0.000 Intergenic Intergenic -608613 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr3-5746 chr3 20694124 20694334 + 6.25 0.000 Intergenic MIRb|SINE|MIR 351761 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr17-5097 chr17 4649559 4649769 + 6.25 0.000 Intergenic AluSz|SINE|Alu -7986 NM_001140 246 Hs.73809 NM_001140 ENSG00000161905 ALOX15 12-LOX|15-LOX|15-LOX-1|LOG15 arachidonate 15-lipoxygenase protein-coding chrX-2463 chrX 82655687 82655897 + 6.25 0.000 Intergenic MLT2B3|LTR|ERVL -852498 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr19-3756 chr19 52270332 52270542 + 6.25 0.000 intron (NM_001010851, intron 1 of 3) intron (NM_001010851, intron 1 of 3) 850 NM_001010851 90321 Hs.439662 NM_001010851 ENSG00000196214 ZNF766 - zinc finger protein 766 protein-coding chr13-3556 chr13 24687708 24687918 + 6.25 0.000 intron (NM_001676, intron 3 of 22) MamRTE1|LINE|RTE-BovB 7402 NM_001185085 479 Hs.147111 NM_001676 ENSG00000075673 ATP12A ATP1AL1|HK ATPase H+/K+ transporting non-gastric alpha2 subunit protein-coding chr1-10064 chr1 92812153 92812363 + 6.25 0.000 Intergenic L1MA6|LINE|L1 -19728 NR_146333 6125 Hs.532359 NM_000969 ENSG00000122406 RPL5 L5|MSTP030|PPP1R135|uL18 ribosomal protein L5 protein-coding chr2-8540 chr2 132562389 132562599 + 6.25 0.000 intron (NM_001508, intron 1 of 1) L2c|LINE|L2 107711 NM_001321235 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr9-7224 chr9 1013042 1013252 + 6.25 0.000 Intergenic Intergenic -34996 NR_110643 102800446 Hs.171043 NR_110643 LINC01230 TCONS_00015639|linc-DMRT2|lnc-DRMT2 long intergenic non-protein coding RNA 1230 ncRNA chr11-10728 chr11 131748440 131748650 + 6.25 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -84989 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr10-3224 chr10 102907321 102907531 + 6.25 0.000 intron (NR_160733, intron 1 of 2) AluJo|SINE|Alu -10868 NM_199076 54805 Hs.643509 NM_017649 ENSG00000148842 CNNM2 ACDP2|HOMG6|HOMGSMR cyclin and CBS domain divalent metal cation transport mediator 2 protein-coding chr8-6992 chr8 108295440 108295650 + 6.25 0.000 Intergenic Intergenic -46828 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr1-7594 chr1 233614218 233614428 + 6.25 0.000 exon (NM_002245, exon 1 of 3) exon (NM_002245, exon 1 of 3) 217 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr2-11369 chr2 209642203 209642413 + 6.25 0.000 intron (NM_001039538, intron 4 of 14) AluJr4|SINE|Alu 62629 NM_001363911 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr6-3321 chr6 167790179 167790389 + 6.25 0.000 intron (NR_026773, intron 2 of 3) (CCACCC)n|Simple_repeat|Simple_repeat -5245 NR_149041 441179 Hs.192711 NR_149041 ENSG00000269155 LOC441179 - uncharacterized LOC441179 ncRNA chr8-4428 chr8 109808166 109808376 + 6.25 0.000 Intergenic Intergenic -116480 NM_001099744 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr2-13360 chr2 136171003 136171213 + 6.25 0.000 Intergenic Intergenic -52953 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr17-6317 chr17 58312210 58312420 + 6.25 0.000 exon (NM_001261835, exon 17 of 32) exon (NM_001261835, exon 17 of 32) -13135 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr8-7461 chr8 141635939 141636149 + 6.25 0.000 Intergenic Intergenic -128814 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chrX-4462 chrX 57152544 57152754 + 6.25 0.000 Intergenic L1P1|LINE|L1 -15024 NM_019003 54466 Hs.460725 NM_019003 ENSG00000147059 SPIN2A DXF34|SPIN2|TDRD25|dJ323P24.1 spindlin family member 2A protein-coding chr16-5288 chr16 64706228 64706438 + 6.25 0.000 Intergenic MIRb|SINE|MIR 415730 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr21-1808 chr21 39319166 39319376 + 6.25 0.000 intron (NR_046655, intron 2 of 2) intron (NR_046655, intron 2 of 2) 3564 NR_046655 100874093 Hs.588102 NR_046655 ENSG00000238141 BRWD1-AS1 - BRWD1 antisense RNA 1 ncRNA chr5-4451 chr5 5264015 5264225 + 6.25 0.000 intron (NM_139056, intron 18 of 22) LTR28B|LTR|ERV1 123790 NM_139056 170690 Hs.661915 NM_139056 ENSG00000145536 ADAMTS16 ADAMTS16s ADAM metallopeptidase with thrombospondin type 1 motif 16 protein-coding chr21-1440 chr21 27734200 27734410 + 6.25 0.000 intron (NR_024357, intron 1 of 3) MLT1B|LTR|ERVL-MaLR 11926 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr19-3697 chr19 19538349 19538559 + 6.25 0.000 TTS (NM_001190328) TTS (NM_001190328) 189 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr21-1183 chr21 42834192 42834402 + 6.25 0.000 Intergenic Intergenic 44978 NM_001260477 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr5-8461 chr5 131866254 131866464 + 6.25 0.000 intron (NM_001303622, intron 9 of 12) L1M2|LINE|L1 -69342 NM_001346113 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 - folliculin interacting protein 1 protein-coding chr3-6943 chr3 160184739 160184949 + 6.25 0.000 intron (NR_108088, intron 3 of 9) intron (NR_108088, intron 3 of 9) 22248 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr6-4207 chr6 3853804 3854014 + 6.25 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 4536 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr4-5555 chr4 138035177 138035387 + 6.25 0.000 intron (NR_037866, intron 8 of 10) intron (NR_037866, intron 8 of 10) -53732 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr15-3688 chr15 40969382 40969592 + 6.25 0.000 Intergenic Intergenic 16016 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr6-5169 chr6 127539266 127539476 + 6.25 0.000 Intergenic Intergenic -20347 NM_001012279 387104 Hs.319247 NM_001012279 ENSG00000255330 SOGA3 C6orf174|dJ403A15.3 SOGA family member 3 protein-coding chr9-7813 chr9 81097449 81097659 + 6.25 0.000 Intergenic Intergenic 591981 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr8-2165 chr8 86866049 86866259 + 6.25 0.000 promoter-TSS (NM_173538) promoter-TSS (NM_173538) -261 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr11-6921 chr11 109124105 109124315 + 6.25 0.000 Intergenic Intergenic -297980 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr2-13328 chr2 132932577 132932787 + 6.25 0.000 intron (NM_207481, intron 8 of 17) intron (NM_207481, intron 8 of 17) 17125 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr9-8714 chr9 131625951 131626161 + 6.25 0.000 exon (NM_001304275, exon 10 of 24) exon (NM_001304275, exon 10 of 24) 80533 NM_001365666 642515 NM_001365666 ENSG00000283526 PRRT1B DSPD2|IFITMD8 proline rich transmembrane protein 1B protein-coding chr2-4542 chr2 45570941 45571151 + 6.25 0.000 intron (NM_018079, intron 9 of 20) L1M4|LINE|L1 40221 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr11-9988 chr11 78380726 78380936 + 6.25 0.000 intron (NM_080491, intron 1 of 9) LTR24|LTR|ERV1 36989 NM_080491 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr8-5688 chr8 123632467 123632677 + 6.25 0.000 Intergenic MIRb|SINE|MIR 21229 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr13-2571 chr13 68685987 68686197 + 6.25 0.000 Intergenic MER4A1_|LTR|ERV1 199233 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr13-1132 chr13 27449828 27450038 + 6.25 0.000 intron (NM_152912, intron 1 of 4) intron (NM_152912, intron 1 of 4) 256 NM_001166262 219402 Hs.534582 NM_152912 ENSG00000122033 MTIF3 IF3mt mitochondrial translational initiation factor 3 protein-coding chr10-6394 chr10 4763855 4764065 + 6.25 0.000 Intergenic MER89|LTR|ERV1 -62217 NR_073127 83592 Hs.657944 NM_031436 ENSG00000165568 AKR1E2 AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR aldo-keto reductase family 1 member E2 protein-coding chr4-5540 chr4 123187783 123187993 + 6.25 0.000 intron (NM_001345856, intron 14 of 15) AluJb|SINE|Alu -208907 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr5-5778 chr5 173988791 173989001 + 6.25 0.000 promoter-TSS (NM_001144954) promoter-TSS (NM_001144954) -274 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chr1-15962 chr1 191891398 191891608 + 6.25 0.000 Intergenic Intergenic -266959 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr5-5678 chr5 160247257 160247467 + 6.25 0.000 Intergenic Intergenic 17856 NM_001445 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr5-4128 chr5 82332579 82332789 + 6.25 0.000 Intergenic Intergenic 53222 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr8-4887 chr8 71803130 71803340 + 6.25 0.000 Intergenic L2c|LINE|L2 -39888 NR_033652 100132891 Hs.137674 NR_033651 ENSG00000235531 MSC-AS1 - MSC antisense RNA 1 ncRNA chr12-6389 chr12 70056639 70056849 + 6.25 0.000 Intergenic Intergenic -186286 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr4-6360 chr4 104986371 104986581 + 6.25 0.000 Intergenic MER5B|DNA|hAT-Charlie -159399 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr6-6116 chr6 156218200 156218410 + 6.25 0.000 Intergenic L1ME4a|LINE|L1 -160445 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr12-4808 chr12 56054897 56055107 + 6.25 0.000 Intergenic Intergenic 13084 NM_001029 6231 Hs.447562 NM_001029 ENSG00000197728 RPS26 DBA10|S26|eS26 ribosomal protein S26 protein-coding chr3-5933 chr3 44027441 44027651 + 6.25 0.000 Intergenic LTR16E2|LTR|ERVL -86666 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr14-3340 chr14 89781763 89781973 + 6.25 0.000 Intergenic Intergenic -162703 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr10-7830 chr10 44279096 44279306 + 6.25 0.000 Intergenic Intergenic -13549 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr12-3681 chr12 131125454 131125664 + 6.25 0.000 intron (NM_198827, intron 20 of 24) (ATACAG)n|Simple_repeat|Simple_repeat -39452 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA chrX-3137 chrX 14095838 14096048 + 6.25 0.000 Intergenic Intergenic -66051 NM_001042480 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chr9-4272 chr9 100472785 100472995 + 6.25 0.000 promoter-TSS (NM_003692) promoter-TSS (NM_003692) -259 NM_003692 8577 Hs.598100 NM_003692 ENSG00000241697 TMEFF1 C9orf2|CT120.1|H7365|TR-1 transmembrane protein with EGF like and two follistatin like domains 1 protein-coding chr10-4286 chr10 11472190 11472400 + 6.25 0.000 intron (NM_014688, intron 14 of 14) intron (NM_014688, intron 14 of 14) 59985 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr1-11271 chr1 4962295 4962505 + 6.25 0.000 Intergenic Intergenic 307791 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr12-6687 chr12 3354499 3354709 + 6.25 0.000 intron (NR_148995, intron 1 of 11) intron (NR_148995, intron 1 of 11) 11518 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr17-3340 chr17 76146410 76146620 + 6.25 0.000 intron (NR_040017, intron 5 of 7) intron (NR_040017, intron 5 of 7) -5270 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr2-8088 chr2 74916784 74916994 + 6.25 0.000 intron (NR_125792, intron 1 of 4) L2a|LINE|L2 7758 NR_125792 102724515 Hs.708649 NR_125792 ENSG00000204792 LINC01291 - long intergenic non-protein coding RNA 1291 ncRNA chr14-2201 chr14 101035841 101036051 + 6.25 0.000 Intergenic Intergenic 2191 NR_030175 574453 NR_030175 ENSG00000207743 MIR495 MIRN495|hsa-mir-495|mir-495 microRNA 495 ncRNA chr15-3322 chr15 79591922 79592132 + 6.25 0.000 Intergenic L2b|LINE|L2 159511 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr7-7279 chr7 34737740 34737950 + 6.25 0.000 intron (NR_015356, intron 2 of 4) L2a|LINE|L2 20427 NR_033664 404744 Hs.487951 NM_207283 ENSG00000197085 NPSR1-AS1 AAA1 NPSR1 antisense RNA 1 ncRNA chrX-3396 chrX 4543416 4543626 + 6.25 0.000 Intergenic HERVH-int|LTR|ERV1 90051 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr9-6506 chr9 101425321 101425531 + 6.25 0.000 intron (NM_000035, intron 7 of 8) intron (NM_000035, intron 7 of 8) 10348 NM_000035 229 Hs.530274 NM_000035 ENSG00000136872 ALDOB ALDB|ALDO2 aldolase, fructose-bisphosphate B protein-coding chr9-6411 chr9 38470044 38470254 + 6.25 0.000 Intergenic Intergenic -45695 NM_001007563 347252 Hs.349705 NM_001007563 ENSG00000137142 IGFBPL1 IGFBP-RP4|IGFBPRP4|bA113O24.1 insulin like growth factor binding protein like 1 protein-coding chr5-1349 chr5 9621471 9621681 + 6.25 0.000 Intergenic Intergenic 8775 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr5-8835 chr5 151054621 151054831 + 6.25 0.000 intron (NM_001258454, intron 6 of 17) intron (NM_001258454, intron 6 of 17) 10405 NM_001258455 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr17-7103 chr17 72489556 72489766 + 6.25 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 103143 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chrX-4886 chrX 106960111 106960321 + 6.25 0.000 intron (NM_001085354, intron 10 of 16) intron (NM_001085354, intron 10 of 16) 39814 NM_020384 9075 Hs.522746 NM_020384 ENSG00000165376 CLDN2 - claudin 2 protein-coding chr14-3304 chr14 85387411 85387621 + 6.25 0.000 intron (NR_135155, intron 1 of 2) intron (NR_135155, intron 1 of 2) 241 NR_135155 105370605 NR_135155 ENSG00000258814 LINC02329 - long intergenic non-protein coding RNA 2329 ncRNA chr8-5736 chr8 137615685 137615895 + 6.25 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -202202 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr7-7934 chr7 9432288 9432498 + 6.25 0.000 Intergenic Intergenic -201877 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr7-6986 chr7 108836455 108836665 + 6.25 0.000 Intergenic Intergenic 48027 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chrX-3269 chrX 96182530 96182740 + 6.25 0.000 Intergenic Intergenic 155267 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr5-6685 chr5 62699867 62700077 + 6.25 0.000 Intergenic Intergenic 121153 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr8-5016 chr8 6083763 6083973 + 6.25 0.000 Intergenic MER76|LTR|ERVL 322680 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr12-6906 chr12 23457617 23457827 + 6.25 0.000 Intergenic Intergenic 126864 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr20-1560 chr20 63580869 63581079 + 6.25 0.000 Intergenic MER21B|LTR|ERVL -6735 NM_001037335 85441 Hs.517180 NM_033405 ENSG00000130589 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2 protein-coding chr7-7613 chr7 132661049 132661259 + 6.25 0.000 intron (NR_046323, intron 1 of 4) MIR|SINE|MIR 12360 NR_046323 286023 Hs.671875 NM_173682 ENSG00000183470 FLJ40288 - uncharacterized FLJ40288 ncRNA chr2-11822 chr2 17926409 17926619 + 6.25 0.000 intron (NM_002252, intron 2 of 2) THE1C-int|LTR|ERVL-MaLR 47847 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr2-8882 chr2 177100480 177100690 + 6.25 0.000 Intergenic AluJr|SINE|Alu 111826 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr6-7206 chr6 39601318 39601528 + 6.25 0.000 intron (NM_001289020, intron 6 of 21) intron (NM_001289020, intron 6 of 21) 123985 NM_001289020 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chrX-4441 chrX 54983528 54983738 + 6.25 0.000 intron (NR_073450, intron 1 of 12) L1PA13|LINE|L1 10555 NM_002625 5207 Hs.444304 NM_002625 ENSG00000158571 PFKFB1 F6PK|HL2K|PFRX 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 protein-coding chr20-1891 chr20 50987881 50988091 + 6.25 0.000 Intergenic Intergenic 29168 NM_014484 27304 Hs.159410 NM_014484 ENSG00000124217 MOCS3 UBA4 molybdenum cofactor synthesis 3 protein-coding chr19-3083 chr19 4568053 4568263 + 6.25 0.000 Intergenic MER5A1|DNA|hAT-Charlie -8474 NM_032108 10501 Hs.465642 NM_020241 ENSG00000167680 SEMA6B SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ semaphorin 6B protein-coding chr12-6331 chr12 55008302 55008512 + 6.25 0.000 Intergenic Intergenic -11567 NM_021191 58158 Hs.591024 NM_021191 ENSG00000123307 NEUROD4 ATH-3|ATH3|Atoh3|MATH-3|MATH3|bHLHa4 neuronal differentiation 4 protein-coding chr13-4021 chr13 72114813 72115023 + 6.25 0.000 Intergenic Intergenic -247714 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr1-12065 chr1 121034833 121035043 + 6.25 0.000 intron (NR_135813, intron 2 of 2) intron (NR_135813, intron 2 of 2) 17229 NR_135813 101929798 Hs.649642 NR_135813 ENSG00000275585 LOC101929798 CH17-118O6.3 phosphodiesterase 4D interacting protein pseudogene pseudo chr6-5987 chr6 93621402 93621612 + 6.25 0.000 Intergenic Intergenic -82510 NR_152794 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr2-13488 chr2 148210033 148210243 + 6.25 0.000 intron (NM_018328, intron 3 of 14) intron (NM_018328, intron 3 of 14) -188534 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr1-9232 chr1 22943052 22943262 + 6.25 0.000 Intergenic Intergenic 29709 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr11-9787 chr11 69829965 69830175 + 6.25 0.000 Intergenic L2a|LINE|L2 -10654 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr9-5369 chr9 90978668 90978878 + 6.25 0.000 Intergenic Intergenic 96359 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr5-6442 chr5 161706385 161706595 + 6.25 0.000 Intergenic AluY|SINE|Alu 20769 NM_000811 2559 Hs.90791 NM_000811 ENSG00000145863 GABRA6 - gamma-aminobutyric acid type A receptor alpha6 subunit protein-coding chr4-4831 chr4 108827843 108828053 + 6.25 0.000 intron (NM_198721, intron 31 of 36) L2a|LINE|L2 -64895 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chrX-3903 chrX 8517661 8517871 + 6.25 0.000 Intergenic MER50B|LTR|ERV1 52936 NM_001001888 425054 Hs.279737 NM_001001888 ENSG00000205642 VCX3B VCX-C|VCXC variable charge X-linked 3B protein-coding chr13-2959 chr13 48805138 48805348 + 6.25 0.000 Intergenic Intergenic 151314 NM_001308471 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr4-6350 chr4 99851037 99851247 + 6.25 0.000 intron (NM_001306151, intron 3 of 9) intron (NM_001306151, intron 3 of 9) 34315 NM_014395 27071 Hs.436271 NM_014395 ENSG00000070190 DAPP1 BAM32 dual adaptor of phosphotyrosine and 3-phosphoinositides 1 protein-coding chr11-7309 chr11 57303443 57303653 + 6.25 0.000 intron (NM_033396, intron 6 of 11) L2b|LINE|L2 21404 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr1-13780 chr1 17724582 17724792 + 6.25 0.000 Intergenic AluSq2|SINE|Alu -30646 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr22-2922 chr22 46747660 46747870 + 6.25 0.000 Intergenic Intergenic -9513 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr3-6303 chr3 75220148 75220358 + 6.25 0.000 Intergenic Intergenic 5777 NR_039646 100616394 NR_039646 ENSG00000284252 MIR4444-1 MIR4444|hsa-mir-4444-1|miR-4444-1 microRNA 4444-1 ncRNA chr16-6790 chr16 78211528 78211738 + 6.25 0.000 intron (NM_001291997, intron 4 of 7) intron (NM_001291997, intron 4 of 7) 111979 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr8-5469 chr8 43294616 43294826 + 6.25 0.000 intron (NM_001005365, intron 1 of 13) intron (NM_001005365, intron 1 of 13) 2279 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr12-2724 chr12 2865546 2865756 + 6.25 0.000 intron (NM_202002, intron 5 of 9) AluSp|SINE|Alu -8612 NM_001365175 101929469 Hs.634625 NM_001365174 ENSG00000283297 TEX52 - testis expressed 52 protein-coding chr14-2915 chr14 39582177 39582387 + 6.25 0.000 Intergenic Intergenic -149782 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr11-5532 chr11 91362540 91362750 + 6.25 0.000 Intergenic Intergenic -493443 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr10-6395 chr10 4963329 4963539 + 6.25 0.000 promoter-TSS (NM_001353) promoter-TSS (NM_001353) 19 NM_001353 1645 Hs.460260 NM_001353 ENSG00000187134 AKR1C1 2-ALPHA-HSD|20-ALPHA-HSD|C9|DD1|DD1/DD2|DDH|DDH1|H-37|HAKRC|HBAB|MBAB aldo-keto reductase family 1 member C1 protein-coding chr15-1903 chr15 77632083 77632293 + 6.25 0.000 intron (NM_001301195, intron 3 of 3) intron (NM_001301195, intron 3 of 3) 724 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr8-3382 chr8 58285052 58285262 + 6.25 0.000 Intergenic Intergenic -13056 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr4-5808 chr4 86489995 86490205 + 6.25 0.000 Intergenic Intergenic -36905 NM_002753 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr9-7903 chr9 88695265 88695475 + 6.25 0.000 Intergenic Intergenic 50535 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr2-8903 chr2 180258442 180258652 + 6.25 0.000 Intergenic Intergenic -251250 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr6-7186 chr6 38574003 38574213 + 6.25 0.000 intron (NM_001172418, intron 5 of 10) intron (NM_001172418, intron 5 of 10) 21959 NM_001172418 114781 Hs.603858 NM_052893 ENSG00000183826 BTBD9 dJ322I12.1 BTB domain containing 9 protein-coding chr17-4367 chr17 17376906 17377116 + 6.25 0.000 Intergenic MER91A|DNA|hAT-Tip100 73638 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chrX-4708 chrX 87516708 87516918 + 6.25 0.000 promoter-TSS (NM_019117) promoter-TSS (NM_019117) -989 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr5-5026 chr5 84781326 84781536 + 6.25 0.000 Intergenic MSTB|LTR|ERVL-MaLR -396551 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr5-3782 chr5 71694321 71694531 + 6.25 0.000 Intergenic Intergenic -24849 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr7-8799 chr7 82840069 82840279 + 6.25 0.000 intron (NM_033026, intron 14 of 24) intron (NM_033026, intron 14 of 24) 322710 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr2-12818 chr2 91941339 91941549 + 6.25 0.000 non-coding (NR_027714, exon 1 of 1) non-coding (NR_027714, exon 1 of 1) 311 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo chr5-8300 chr5 114702372 114702582 + 6.25 0.000 intron (NR_130785, intron 1 of 12) intron (NR_130785, intron 1 of 12) 70936 NR_130785 101927078 Hs.160027 NR_130785 LOC101927078 - uncharacterized LOC101927078 ncRNA chr1-15897 chr1 183720079 183720289 + 6.25 0.000 intron (NM_001297669, intron 2 of 18) intron (NM_001297669, intron 2 of 18) -66868 NM_203454 403314 Hs.97335 NM_203454 ENSG00000173627 APOBEC4 C1orf169 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 protein-coding chrX-3081 chrX 124561107 124561317 + 6.25 0.000 intron (NM_014253, intron 14 of 30) intron (NM_014253, intron 14 of 30) 214930 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr5-3727 chr5 31002283 31002493 + 6.25 0.000 Intergenic L1PB1|LINE|L1 -191298 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr2-3432 chr2 95049373 95049583 + 6.25 0.000 intron (NM_022438, intron 2 of 2) intron (NM_022438, intron 2 of 2) 23770 NM_002371 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr20-1527 chr20 44138900 44139110 + 6.25 0.000 intron (NM_020433, intron 2 of 5) intron (NM_020433, intron 2 of 5) 48183 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr18-2495 chr18 54100112 54100322 + 6.25 0.000 Intergenic MLT2B3|LTR|ERVL 122195 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr13-3764 chr13 43559020 43559230 + 6.25 0.000 intron (NM_001347965, intron 1 of 15) intron (NM_001347965, intron 1 of 15) 70352 NM_001127615 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr1-12857 chr1 102374662 102374872 + 6.25 0.000 Intergenic AluJr|SINE|Alu -377533 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr10-9159 chr10 128902113 128902323 + 6.25 0.000 Intergenic L1MEc|LINE|L1 -10615 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr13-3471 chr13 113226838 113227048 + 6.25 0.000 intron (NM_001354942, intron 3 of 19) intron (NM_001354942, intron 3 of 19) 17330 NM_001354943 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr7-7962 chr7 12389107 12389317 + 6.25 0.000 exon (NM_001346972, exon 3 of 27) exon (NM_001346972, exon 3 of 27) 14653 NM_001135924 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding chr16-3481 chr16 2405099 2405309 + 6.25 0.000 intron (NR_003574, intron 10 of 16) AluSp|SINE|Alu -24243 NM_001323538 899 Hs.1973 NM_001761 ENSG00000162063 CCNF FBX1|FBXO1 cyclin F protein-coding chrX-850 chrX 130082541 130082751 + 6.25 0.000 intron (NM_001127197, intron 1 of 8) intron (NM_001127197, intron 1 of 8) 27854 NM_001421 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr17-6271 chr17 39206889 39207099 + 6.25 0.000 Intergenic AluJb|SINE|Alu 6671 NM_001330200 6143 Hs.381061 NM_000981 ENSG00000108298 RPL19 L19 ribosomal protein L19 protein-coding chr4-3848 chr4 126779930 126780140 + 6.25 0.000 Intergenic LTR1C|LTR|ERV1 -852922 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr1-11521 chr1 156586595 156586805 + 6.25 0.000 3' UTR (NM_001105669, exon 10 of 10) 3' UTR (NM_001105669, exon 10 of 10) -5076 NM_144772 128240 Hs.528320 NM_144772 ENSG00000163382 NAXE AIBP|APOA1BP|PEBEL|YJEFN1 NAD(P)HX epimerase protein-coding chr2-4886 chr2 122338884 122339094 + 6.25 0.000 Intergenic FordPrefect_a|DNA|hAT-Tip100 583338 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr12-5425 chr12 122357672 122357882 + 6.25 0.000 intron (NM_198240, intron 5 of 23) SVA_D|Retroposon|SVA -37765 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chr9-4914 chr9 9562466 9562676 + 6.25 0.000 intron (NM_002839, intron 8 of 45) L2a|LINE|L2 -236821 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr17-6993 chr17 50591984 50592194 + 6.25 0.000 exon (NM_001256328, exon 13 of 35) exon (NM_001256328, exon 13 of 35) -29981 NR_038439 253962 Hs.558704 NR_038439 ENSG00000250107 CACNA1G-AS1 CAS1 CACNA1G antisense RNA 1 ncRNA chr5-5967 chr5 117747112 117747322 + 6.25 0.000 intron (NR_104997, intron 1 of 2) MIR|SINE|MIR 16856 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr8-5168 chr8 94744295 94744505 + 6.25 0.000 intron (NM_181787, intron 6 of 18) MLT1F2|LTR|ERVL-MaLR 24500 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr17-7851 chr17 42026919 42027129 + 6.25 0.000 exon (NM_001242704, exon 8 of 8) exon (NM_001242704, exon 8 of 8) 6934 NM_017595 28511 Hs.632252 NM_017595 ENSG00000168256 NKIRAS2 KBRAS2|kappaB-Ras2 NFKB inhibitor interacting Ras like 2 protein-coding chr11-8746 chr11 8529638 8529848 + 6.25 0.000 intron (NM_001352388, intron 1 of 14) MLT1D|LTR|ERVL-MaLR 64233 NM_001289061 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr4-7612 chr4 82332891 82333101 + 6.25 0.000 Intergenic AluSz6|SINE|Alu 40995 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr2-10874 chr2 65328450 65328660 + 6.25 0.000 intron (NM_001128210, intron 4 of 5) MIRb|SINE|MIR 38223 NM_001128210 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr6-8404 chr6 150616458 150616668 + 6.25 0.000 intron (NM_001329799, intron 1 of 15) intron (NM_001329799, intron 1 of 15) -16401 NR_138140 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr5-8273 chr5 113022680 113022890 + 6.25 0.000 TTS (NM_001242377) TTS (NM_001242377) 45987 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr13-2958 chr13 47256975 47257185 + 6.25 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -360004 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr7-8018 chr7 18212856 18213066 + 6.25 0.000 intron (NM_001321872, intron 2 of 11) intron (NM_001321872, intron 2 of 11) -77131 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr12-7477 chr12 65420856 65421066 + 6.25 0.000 intron (NM_001031679, intron 5 of 6) L1PREC2|LINE|L1 136350 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr8-2972 chr8 80487586 80487796 + 6.25 0.000 exon (NM_023929, exon 1 of 7) exon (NM_023929, exon 1 of 7) 1465 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr12-4958 chr12 73590684 73590894 + 6.25 0.000 Intergenic LTR79|LTR|ERVL 431599 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LINC02444 - long intergenic non-protein coding RNA 2444 ncRNA chrX-5152 chrX 131235266 131235476 + 6.25 0.000 Intergenic Intergenic 53690 NM_001170963 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr12-6943 chr12 26204663 26204873 + 6.25 0.000 intron (NM_005086, intron 1 of 2) intron (NM_005086, intron 1 of 2) 9195 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr5-7387 chr5 22857669 22857879 + 6.25 0.000 Intergenic Intergenic -4430 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr10-6977 chr10 69211633 69211843 + 6.25 0.000 Intergenic Intergenic -8594 NM_025130 80201 Hs.522988 NM_025130 ENSG00000156510 HKDC1 - hexokinase domain containing 1 protein-coding chr7-6879 chr7 55814255 55814465 + 6.25 0.000 intron (NM_207366, intron 7 of 9) L1MA3|LINE|L1 48392 NM_207366 346288 Hs.453629 NM_207366 ENSG00000154997 SEPTIN14 SEPT14 septin 14 protein-coding chrX-4280 chrX 41889839 41890049 + 6.25 0.000 intron (NM_003688, intron 1 of 26) Tigger19b|DNA|TcMar-Tigger 33090 NM_003688 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr12-5162 chr12 102394124 102394334 + 6.25 0.000 Intergenic MIRb|SINE|MIR 84321 NM_001111284 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr6-8626 chr6 170233721 170233931 + 6.25 0.000 Intergenic Intergenic 28743 NR_002787 154449 Hs.447751 NR_002787 ENSG00000230960 LOC154449 - uncharacterized LOC154449 ncRNA chr9-6099 chr9 137632970 137633180 + 6.25 0.000 intron (NM_001354612, intron 1 of 8) intron (NM_001354612, intron 1 of 8) 14070 NM_001354611 79813 Hs.495511 NM_024757 ENSG00000181090 EHMT1 EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D euchromatic histone lysine methyltransferase 1 protein-coding chr11-9176 chr11 35523269 35523479 + 6.25 0.000 intron (NM_001282675, intron 2 of 12) intron (NM_001282675, intron 2 of 12) 2242 NM_015430 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr1-16018 chr1 199751776 199751986 + 6.25 0.000 Intergenic MIRb|SINE|MIR -275829 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr15-3739 chr15 58704754 58704964 + 6.25 0.000 intron (NM_001320570, intron 2 of 14) intron (NM_001320570, intron 2 of 14) -11252 NR_073415 664618 Hs.670224 NR_002927 HSP90AB4P HSP90Bd heat shock protein 90 alpha family class B member 4, pseudogene pseudo chr2-10857 chr2 61875561 61875771 + 6.25 0.000 intron (NM_001256721, intron 7 of 12) MER41-int|LTR|ERV1 12990 NM_006430 10575 Hs.421509 NM_006430 ENSG00000115484 CCT4 CCT-DELTA|Cctd|SRB chaperonin containing TCP1 subunit 4 protein-coding chr3-8832 chr3 8779268 8779478 + 6.25 0.000 Intergenic MIRb|SINE|MIR -9759 NM_001354653 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr11-4388 chr11 77029438 77029648 + 6.25 0.000 Intergenic Intergenic -4855 NM_138706 192134 Hs.352622 NM_138706 ENSG00000198488 B3GNT6 B3Gn-T6|BGnT-6|beta-1,3-Gn-T6|beta3Gn-T6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 protein-coding chr11-10162 chr11 93169977 93170187 + 6.25 0.000 intron (NM_152313, intron 6 of 10) intron (NM_152313, intron 6 of 10) 27344 NM_001286139 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr2-13430 chr2 142700510 142700720 + 6.25 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger -177049 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chrX-5413 chrX 153232114 153232324 + 6.25 0.000 Intergenic Intergenic 52935 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chr12-7325 chr12 54823017 54823227 + 6.25 0.000 Intergenic LTR9D|LTR|ERV1 -31394 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr6-8226 chr6 136309127 136309337 + 6.25 0.000 Intergenic Intergenic -19381 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr11-9477 chr11 62106100 62106310 + 6.25 0.000 Intergenic AluSx|SINE|Alu -17806 NM_020238 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr11-8549 chr11 132199692 132199902 + 6.25 0.000 intron (NM_016522, intron 2 of 6) intron (NM_016522, intron 2 of 6) -84505 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr18-2520 chr18 70566762 70566972 + 6.25 0.000 Intergenic L1ME3G|LINE|L1 84087 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr8-4832 chr8 25051041 25051251 + 6.25 0.000 Intergenic Intergenic -94277 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr10-8798 chr10 107410948 107411158 + 6.25 0.000 Intergenic THE1D|LTR|ERVL-MaLR -246347 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr5-7791 chr5 64511422 64511632 + 6.25 0.000 intron (NM_001029875, intron 2 of 5) intron (NM_001029875, intron 2 of 5) 5512 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr18-2438 chr18 26989773 26989983 + 6.25 0.000 intron (NM_031422, intron 4 of 5) AluSz6|SINE|Alu -124075 NM_001317384 361 Hs.315369 NM_001650 ENSG00000171885 AQP4 MIWC|WCH4 aquaporin 4 protein-coding chr7-2998 chr7 39081841 39082051 + 6.25 0.000 intron (NM_007252, intron 2 of 10) MIR|SINE|MIR -68379 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr18-1139 chr18 7577833 7578043 + 6.25 0.000 intron (NM_002845, intron 1 of 30) intron (NM_002845, intron 1 of 30) 10622 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr2-14695 chr2 237790424 237790634 + 6.25 0.000 Intergenic Charlie5|DNA|hAT-Charlie -8216 NM_001080504 375316 Hs.607265 NM_198852 ENSG00000177483 RBM44 - RNA binding motif protein 44 protein-coding chr4-8123 chr4 126772840 126773050 + 6.25 0.000 Intergenic Intergenic -860012 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr2-13906 chr2 181598400 181598610 + 6.25 0.000 intron (NR_027690, intron 2 of 11) L1PA17|LINE|L1 58600 NM_201548 375298 Hs.732358 NM_201548 ENSG00000188452 CERKL RP26 ceramide kinase like protein-coding chr8-6001 chr8 22462806 22463016 + 6.25 0.000 intron (NM_005605, intron 1 of 13) intron (NM_005605, intron 1 of 13) 21941 NM_001243975 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr12-6905 chr12 23451268 23451478 + 6.25 0.000 Intergenic Charlie1b|DNA|hAT-Charlie 133213 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr13-3076 chr13 43227666 43227876 + 6.25 0.000 intron (NM_001347966, intron 16 of 17) intron (NM_001347966, intron 16 of 17) 114606 NR_047013 100874159 Hs.633241 NR_047013 LINC00400 - long intergenic non-protein coding RNA 400 ncRNA chr3-9162 chr3 33297661 33297871 + 6.25 0.000 non-coding (NR_146130, exon 2 of 16) non-coding (NR_146130, exon 2 of 16) 20324 NR_146123 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding chrX-3741 chrX 123122721 123122931 + 6.25 0.000 Intergenic L1PA13|LINE|L1 -61417 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr10-8357 chr10 80287834 80288044 + 6.25 0.000 intron (NM_000429, intron 1 of 8) MER20|DNA|hAT-Charlie 1719 NM_000429 4143 Hs.282670 NM_000429 ENSG00000151224 MAT1A MAT|MATA1|SAMS|SAMS1 methionine adenosyltransferase 1A protein-coding chr5-8822 chr5 150286271 150286481 + 6.25 0.000 intron (NM_001369025, intron 1 of 17) intron (NM_001369025, intron 1 of 17) 3397 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chrX-3980 chrX 13854740 13854950 + 6.25 0.000 intron (NM_001318729, intron 1 of 6) intron (NM_001318729, intron 1 of 6) -37486 NM_001001996 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr16-4522 chr16 61570207 61570417 + 6.25 0.000 Intergenic Intergenic 466126 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr1-16501 chr1 229843880 229844090 + 6.25 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 41833 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr12-5007 chr12 81044469 81044679 + 6.25 0.000 Intergenic Intergenic -33505 NM_001330242 79611 Hs.259559 NM_024560 ENSG00000111058 ACSS3 - acyl-CoA synthetase short chain family member 3 protein-coding chr22-3534 chr22 11578429 11578639 + 6.25 0.000 Intergenic Intergenic -318872 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr10-3736 chr10 118117182 118117392 + 6.25 0.000 intron (NR_026940, intron 3 of 3) UCON1|Unknown|Unknown -70346 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr12-8028 chr12 113664383 113664593 + 6.25 0.000 Intergenic Intergenic 109195 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr1-14219 chr1 35564888 35565098 + 6.25 0.000 intron (NM_014284, intron 6 of 6) MIR|SINE|MIR 7194 NM_014284 23154 Hs.121870 NM_014284 ENSG00000020129 NCDN - neurochondrin protein-coding chr4-5721 chr4 41486046 41486256 + 6.25 0.000 intron (NM_001289122, intron 1 of 25) intron (NM_001289122, intron 1 of 25) -52006 NM_001330672 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr16-5035 chr16 56888448 56888658 + 6.25 0.000 intron (NM_001126108, intron 18 of 25) AluY|SINE|Alu -15711 NR_106923 102466752 NR_106923 ENSG00000283471 MIR6863 hsa-mir-6863 microRNA 6863 ncRNA chr10-6892 chr10 35133850 35134060 + 6.25 0.000 intron (NM_183060, intron 1 of 5) intron (NM_183060, intron 1 of 5) -3827 NM_183012 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr15-4862 chr15 75223381 75223591 + 6.25 0.000 Intergenic Intergenic 6204 NM_001321990 105376731 NM_001321990 LOC105376731 - taste receptor cell protein 1-like protein-coding chr15-3593 chr15 55468855 55469065 + 6.25 0.000 intron (NM_001033560, intron 4 of 8) intron (NM_001033560, intron 4 of 8) 29624 NR_037923 100533483 Hs.285051 NR_037923 ENSG00000261771 DNAAF4-CCPG1 DYX1C1-CCPG1 DNAAF4-CCPG1 readthrough (NMD candidate) ncRNA chr7-3815 chr7 96058689 96058899 + 6.25 0.000 intron (NM_004411, intron 14 of 16) AluSx|SINE|Alu 160962 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr2-6331 chr2 74037555 74037765 + 6.25 0.000 intron (NM_001287491, intron 3 of 11) intron (NM_001287491, intron 3 of 11) 34968 NM_001366022 200424 Hs.208546 NM_001287491 ENSG00000187605 TET3 hCG_40738 tet methylcytosine dioxygenase 3 protein-coding chr10-8557 chr10 94216797 94217007 + 6.25 0.000 intron (NM_001165979, intron 3 of 31) intron (NM_001165979, intron 3 of 31) 70168 NR_033969 100128054 Hs.677562 NR_033969 ENSG00000268894 PLCE1-AS1 - PLCE1 antisense RNA 1 ncRNA chr8-2582 chr8 47073690 47073900 + 6.25 0.000 Intergenic L1PA7|LINE|L1 -115512 NR_037168 100287846 Hs.21550 NR_037168 LOC100287846 - uncharacterized LOC100287846 ncRNA chrX-3701 chrX 111676592 111676802 + 6.25 0.000 Intergenic AluSz6|SINE|Alu -4421 NR_033125 79868 Hs.443061 NM_018466 ENSG00000101901 ALG13 CDG1S|CXorf45|EIEE36|GLT28D1|MDS031|TDRD13|YGL047W ALG13 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr6-7770 chr6 95689791 95690001 + 6.25 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 112361 NM_024641 79694 Hs.734632 NM_024641 ENSG00000172469 MANEA ENDO|hEndo mannosidase endo-alpha protein-coding chr1-16023 chr1 200206338 200206548 + 6.25 0.000 Intergenic Intergenic 163618 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr5-2741 chr5 135624972 135625182 + 6.25 0.000 intron (NM_001349335, intron 1 of 10) intron (NM_001349335, intron 1 of 10) 28858 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr16-3400 chr16 73735272 73735482 + 6.25 0.000 Intergenic Intergenic 348572 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr8-6531 chr8 67644406 67644616 + 6.25 0.000 intron (NM_020361, intron 1 of 10) intron (NM_020361, intron 1 of 10) 101849 NM_020361 57094 Hs.658850 NM_020361 ENSG00000165078 CPA6 CPAH|ETL5|FEB11 carboxypeptidase A6 protein-coding chr14-3074 chr14 62023613 62023823 + 6.25 0.000 intron (NM_001367661, intron 4 of 8) L1MEg|LINE|L1 -93639 NR_015358 646113 Hs.445241 NM_001039785 LINC00643 - long intergenic non-protein coding RNA 643 ncRNA chr14-4503 chr14 38065722 38065932 + 6.25 0.000 Intergenic MER83|LTR|ERV1 -142077 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr11-7909 chr11 134069100 134069310 + 6.25 0.000 intron (NM_001205329, intron 1 of 7) CpG 133 NM_032801 83700 Hs.150718 NM_032801 ENSG00000166086 JAM3 JAM-2|JAM-3|JAM-C|JAMC junctional adhesion molecule 3 protein-coding chr6-3381 chr6 43874498 43874708 + 6.25 0.000 Intergenic Intergenic -16425 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr15-2197 chr15 89645157 89645367 + 6.25 0.000 intron (NM_198525, intron 9 of 18) intron (NM_198525, intron 9 of 18) 10205 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chr10-6806 chr10 13553356 13553566 + 6.25 0.000 Intergenic AluSx1|SINE|Alu -24447 NM_001369863 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr11-9314 chr11 45826297 45826507 + 6.25 0.000 Intergenic Intergenic -20716 NM_001127457 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr1-5823 chr1 222814706 222814916 + 6.25 0.000 promoter-TSS (NM_001350630) promoter-TSS (NM_001350630) -228 NM_001350630 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr18-3497 chr18 73515387 73515597 + 6.25 0.000 Intergenic MLT2A1|LTR|ERVL 190551 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chrX-1973 chrX 10828154 10828364 + 6.25 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) 5424 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr3-6099 chr3 52561034 52561244 + 6.25 0.000 intron (NM_001366071, intron 27 of 30) intron (NM_001366071, intron 27 of 30) 24534 NM_001124767 440957 Hs.660577 NM_001124767 ENSG00000168273 SMIM4 C3orf78 small integral membrane protein 4 protein-coding chr2-12193 chr2 41712100 41712310 + 6.25 0.000 Intergenic Intergenic -165350 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr11-8492 chr11 120205809 120206019 + 6.25 0.000 Intergenic AluSx4|SINE|Alu -5118 NM_178507 220323 Hs.445081 NM_178507 ENSG00000184232 OAF NS5ATP13TP2 out at first homolog protein-coding chrX-1728 chrX 33123017 33123227 + 6.25 0.000 intron (NM_000109, intron 1 of 78) Tigger3a|DNA|TcMar-Tigger 5305 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-6642 chr3 127667605 127667815 + 6.25 0.000 intron (NM_015720, intron 4 of 7) intron (NM_015720, intron 4 of 7) -5228 NR_033429 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr14-4568 chr14 47226057 47226267 + 6.25 0.000 intron (NM_001113498, intron 2 of 16) AluJr|SINE|Alu 117084 NR_103766 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding chr22-3623 chr22 20987449 20987659 + 6.25 0.000 exon (NM_006767, exon 4 of 21) exon (NM_006767, exon 4 of 21) 5257 NM_006767 8216 Hs.78788 NM_006767 ENSG00000099949 LZTR1 BTBD29|LZTR-1|NS10|NS2|SWNTS2 leucine zipper like transcription regulator 1 protein-coding chr20-3865 chr20 26277563 26277773 + 6.25 0.000 Intergenic Intergenic -68435 NR_040095 284801 Hs.370699 NR_040095 ENSG00000227195 MIR663AHG - MIR663A host gene ncRNA chr1-12568 chr1 30685238 30685448 + 6.25 0.000 Intergenic Intergenic -33429 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr9-7387 chr9 18943361 18943571 + 6.25 0.000 intron (NM_153707, intron 2 of 3) intron (NM_153707, intron 2 of 3) 89743 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr11-3747 chr11 36091408 36091618 + 6.25 0.000 intron (NM_001304264, intron 2 of 5) intron (NM_001304264, intron 2 of 5) -13612 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr1-13879 chr1 21634570 21634780 + 6.25 0.000 intron (NM_001350526, intron 5 of 28) intron (NM_001350526, intron 5 of 28) 17223 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr16-1697 chr16 1998871 1999081 + 6.25 0.000 exon (NM_178167, exon 12 of 14) exon (NM_178167, exon 12 of 14) 9006 NM_004209 9143 Hs.435277 NM_004209 ENSG00000127561 SYNGR3 - synaptogyrin 3 protein-coding chr2-10396 chr2 182555923 182556133 + 6.25 0.000 Intergenic Intergenic -33183 NM_001003683 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr2-4744 chr2 9207079 9207289 + 6.25 0.000 exon (NM_001135191, exon 1 of 27) exon (NM_001135191, exon 1 of 27) 372 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr10-7458 chr10 7693527 7693737 + 6.25 0.000 Intergenic MER20B|DNA|hAT-Charlie -9684 NM_002216 3698 Hs.75285 NM_002216 ENSG00000151655 ITIH2 H2P|SHAP inter-alpha-trypsin inhibitor heavy chain 2 protein-coding chr17-2888 chr17 39418661 39418871 + 6.25 0.000 intron (NM_004774, intron 14 of 16) intron (NM_004774, intron 14 of 16) -16210 NM_001370209 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr5-7817 chr5 66587460 66587670 + 6.25 0.000 Intergenic MIRb|SINE|MIR -8828 NM_198828 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr1-5756 chr1 116792681 116792891 + 6.25 0.000 Intergenic AluY|SINE|Alu 38356 NM_001328609 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding chr10-4170 chr10 93068277 93068487 + 6.25 0.000 exon (NM_183374, exon 6 of 6) exon (NM_183374, exon 6 of 6) -5093 NM_057157 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr3-11163 chr3 189954879 189955089 + 6.25 0.000 Intergenic MIR3|SINE|MIR 125062 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr16-5010 chr16 29962592 29962802 + 6.25 0.000 non-coding (NR_161466, exon 1 of 6) non-coding (NR_161466, exon 1 of 6) 618 NM_001369690 124446 Hs.460574 NM_194280 ENSG00000149932 TMEM219 IGFBP-3R transmembrane protein 219 protein-coding chr5-4440 chr5 2594147 2594357 + 6.25 0.000 Intergenic Intergenic -118339 NR_145480 101234261 NR_145480 ENSG00000281560 LSINCT5 - long stress-induced non-coding transcript 5 ncRNA chr5-3377 chr5 139982733 139982943 + 6.25 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 60461 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr7-5403 chr7 34070667 34070877 + 6.25 0.000 intron (NM_133468, intron 12 of 15) MER103C|DNA|hAT-Charlie 165233 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr2-4734 chr2 1021899 1022109 + 6.25 0.000 intron (NM_018968, intron 1 of 16) intron (NM_018968, intron 1 of 16) -70612 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr20-3577 chr20 3711896 3712106 + 6.25 0.000 intron (NM_023068, intron 1 of 21) intron (NM_023068, intron 1 of 21) 599 NM_023068 6614 Hs.31869 NM_023068 ENSG00000088827 SIGLEC1 CD169|SIGLEC-1|SN sialic acid binding Ig like lectin 1 protein-coding KI270442.1-9 KI270442.1 248404 248614 + 6.25 0.000 NA NA NA NA chr17-4836 chr17 59472590 59472800 + 6.25 0.000 intron (NR_110813, intron 2 of 2) Tigger3a|DNA|TcMar-Tigger 54162 NR_110813 101927728 Hs.569720 NR_110813 ENSG00000265313 LINC01476 - long intergenic non-protein coding RNA 1476 ncRNA chr10-7982 chr10 59777321 59777531 + 6.25 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -23971 NM_001304731 100507027 Hs.648790 NM_001304731 ENSG00000227877 MRLN LINC00948|Linc-RAM|M1|MLN|MUSER1 myoregulin protein-coding chr15-4016 chr15 59241038 59241248 + 6.25 0.000 intron (NM_004998, intron 4 of 27) intron (NM_004998, intron 4 of 27) 34300 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr16-6401 chr16 54326388 54326598 + 6.25 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -39706 NM_024336 79191 Hs.499205 NM_024336 ENSG00000177508 IRX3 IRX-1|IRXB1 iroquois homeobox 3 protein-coding chr1-10261 chr1 119741013 119741223 + 6.25 0.000 intron (NM_006623, intron 9 of 11) intron (NM_006623, intron 9 of 11) 27814 NM_001166107 3158 Hs.59889 NM_005518 ENSG00000134240 HMGCS2 - 3-hydroxy-3-methylglutaryl-CoA synthase 2 protein-coding chr4-6130 chr4 25633682 25633892 + 6.25 0.000 Intergenic Intergenic -22064 NM_006424 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr17-4094 chr17 80584265 80584475 + 6.25 0.000 intron (NM_020761, intron 1 of 33) intron (NM_020761, intron 1 of 33) 39532 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr15-4723 chr15 67783332 67783542 + 6.25 0.000 intron (NM_001206804, intron 21 of 21) L2c|LINE|L2 -42072 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr7-6296 chr7 139453162 139453372 + 6.25 0.000 3' UTR (NM_198508, exon 5 of 5) 3' UTR (NM_198508, exon 5 of 5) -25741 NR_033999 100129148 Hs.744449 NR_033999 LOC100129148 - uncharacterized LOC100129148 ncRNA chr12-7070 chr12 41953518 41953728 + 6.25 0.000 Intergenic MER45A|DNA|hAT-Tip100 189434 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr20-3589 chr20 4104509 4104719 + 6.25 0.000 Intergenic AluSz6|SINE|Alu -44165 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chrX-3571 chrX 72160551 72160761 + 6.25 0.000 3' UTR (NM_207422, exon 2 of 2) 3' UTR (NM_207422, exon 2 of 2) 16472 NM_207422 392490 Hs.660859 NM_207422 FLJ44635 - TPT1-like protein protein-coding chr10-6223 chr10 56962892 56963102 + 6.25 0.000 Intergenic L1PA16|LINE|L1 341562 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr3-10575 chr3 141776633 141776843 + 6.25 0.000 Intergenic Intergenic -1463 NM_139209 131890 Hs.680654 NM_139209 ENSG00000114124 GRK7 GPRK7 G protein-coupled receptor kinase 7 protein-coding chr19-4140 chr19 28322223 28322433 + 6.25 0.000 Intergenic L1M4|LINE|L1 -284360 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr5-3490 chr5 172982416 172982626 + 6.25 0.000 Intergenic AluSx1|SINE|Alu -1250 NM_003945 8992 Hs.484188 NM_003945 ENSG00000113732 ATP6V0E1 ATP6H|ATP6V0E|M9.2|Vma21|Vma21p ATPase H+ transporting V0 subunit e1 protein-coding chr8-7388 chr8 139104629 139104839 + 6.25 0.000 Intergenic Intergenic -190693 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr5-8262 chr5 111860175 111860385 + 6.25 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) -52228 NR_046678 100873948 Hs.147716 NR_046678 ENSG00000250095 NREP-AS1 - NREP antisense RNA 1 ncRNA chr2-7144 chr2 196323133 196323343 + 6.25 0.000 intron (NM_020760, intron 6 of 28) intron (NM_020760, intron 6 of 28) 38939 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr10-5661 chr10 97925546 97925756 + 6.25 0.000 intron (NM_001206528, intron 3 of 14) (AGTGAG)n|Simple_repeat|Simple_repeat -49754 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr2-11937 chr2 25374875 25375085 + 6.25 0.000 Intergenic Intergenic -32390 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr2-12774 chr2 85736439 85736649 + 6.25 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -17447 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr3-9378 chr3 47365706 47365916 + 6.25 0.000 Intergenic L1MB7|LINE|L1 -15210 NM_015466 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chrX-3021 chrX 68744197 68744407 + 6.25 0.000 Intergenic L2a|LINE|L2 50663 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr1-13551 chr1 7185463 7185673 + 6.25 0.000 intron (NM_001349608, intron 3 of 21) L1MC4a|LINE|L1 204186 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr13-4168 chr13 87906913 87907123 + 6.25 0.000 Intergenic L1MEi|LINE|L1 -96498 NR_104059 101930749 Hs.539610 NR_104059 ENSG00000223404 LINC00397 - long intergenic non-protein coding RNA 397 ncRNA chr13-3347 chr13 73606327 73606537 + 6.25 0.000 Intergenic Intergenic 42188 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr3-5876 chr3 36730631 36730841 + 6.25 0.000 intron (NM_033403, intron 2 of 4) MER3|DNA|hAT-Charlie 9125 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr6-6874 chr6 10902426 10902636 + 6.25 0.000 intron (NM_001040274, intron 6 of 29) intron (NM_001040274, intron 6 of 29) 15479 NM_001040274 221711 Hs.729128 NM_194299 ENSG00000153157 SYCP2L C6orf177|NO145|dJ62D2.1 synaptonemal complex protein 2 like protein-coding chr20-4375 chr20 57069300 57069510 + 6.25 0.000 Intergenic Intergenic -144291 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr12-4923 chr12 68223280 68223490 + 6.25 0.000 intron (NM_018402, intron 3 of 4) intron (NM_018402, intron 3 of 4) 2425 NM_018402 55801 Hs.272350 NM_018402 ENSG00000111536 IL26 AK155|IL-26 interleukin 26 protein-coding chr5-5252 chr5 119873814 119874024 + 6.25 0.000 Intergenic MER50B|LTR|ERV1 244360 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr11-10152 chr11 92422811 92423021 + 6.25 0.000 intron (NM_001008781, intron 1 of 24) intron (NM_001008781, intron 1 of 24) 70820 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr15-3300 chr15 78276708 78276918 + 6.25 0.000 intron (NM_018602, intron 6 of 7) intron (NM_018602, intron 6 of 7) 10595 NM_001130183 55466 Hs.513053 NM_018602 ENSG00000140403 DNAJA4 MST104|MSTP104|PRO1472 DnaJ heat shock protein family (Hsp40) member A4 protein-coding chr5-5192 chr5 112353275 112353485 + 6.25 0.000 intron (NM_001347887, intron 1 of 23) L1MA4A|LINE|L1 65897 NM_022140 64097 Hs.584954 NM_022140 ENSG00000129595 EPB41L4A EPB41L4|NBL4 erythrocyte membrane protein band 4.1 like 4A protein-coding chr20-2843 chr20 61740294 61740504 + 6.25 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) -20651 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr15-3854 chr15 87627730 87627940 + 6.25 0.000 Intergenic Intergenic 50906 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr10-6726 chr10 126706800 126707010 + 6.25 0.000 Intergenic Intergenic -36395 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr18-1930 chr18 34583949 34584159 + 6.25 0.000 intron (NM_001198945, intron 1 of 10) HAL1|LINE|L1 -9281 NM_001128175 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr7-8873 chr7 90442580 90442790 + 6.25 0.000 Intergenic Intergenic -26954 NM_001365443 102723899 Hs.731917 NM_001365443 LOC102723899 - uncharacterized LOC102723899 protein-coding chrX-5380 chrX 150871517 150871727 + 6.25 0.000 intron (NM_001242614, intron 1 of 11) L1ME2|LINE|L1 27046 NM_134445 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chrX-3708 chrX 113883364 113883574 + 6.25 0.000 intron (NR_131204, intron 1 of 2) intron (NR_131204, intron 1 of 2) 54749 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr9-8609 chr9 128473422 128473632 + 6.25 0.000 intron (NM_153433, intron 7 of 20) intron (NM_153433, intron 7 of 20) 16620 NM_153437 4957 Hs.129055 NM_002540 ENSG00000136811 ODF2 CT134|ODF2/1|ODF2/2|ODF84 outer dense fiber of sperm tails 2 protein-coding chr2-9610 chr2 241748379 241748589 + 6.25 0.000 intron (NR_109778, intron 6 of 7) intron (NR_109778, intron 6 of 7) 13854 NR_109778 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr21-1275 chr21 29664128 29664338 + 6.25 0.000 intron (NM_000830, intron 4 of 16) intron (NM_000830, intron 4 of 16) 68193 NR_033368 100379661 Hs.659368 NR_033368 ENSG00000156273 GRIK1-AS2 C21orf41|NCRNA00258 GRIK1 antisense RNA 2 ncRNA chr1-12722 chr1 56540822 56541032 + 6.25 0.000 intron (NM_003713, intron 1 of 5) intron (NM_003713, intron 1 of 5) 38636 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr2-13648 chr2 161100387 161100597 + 6.25 0.000 Intergenic Intergenic -36463 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr12-4163 chr12 86466340 86466550 + 6.25 0.000 intron (NM_013244, intron 1 of 6) L1MC1|LINE|L1 -209146 NM_001351287 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding chr4-2826 chr4 42091694 42091904 + 6.25 0.000 Intergenic AluY|SINE|Alu 60856 NM_001159547 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr8-5346 chr8 16008042 16008252 + 6.25 0.000 Intergenic Intergenic 178125 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr11-6257 chr11 57455502 57455712 + 6.25 0.000 Intergenic Intergenic -4921 NM_178570 349667 Hs.502618 NM_178570 ENSG00000186907 RTN4RL2 NGRH1|NgR2 reticulon 4 receptor like 2 protein-coding chr12-6934 chr12 25774796 25775006 + 6.25 0.000 Intergenic Intergenic 99178 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr2-10418 chr2 196010145 196010355 + 6.25 0.000 intron (NM_018897, intron 10 of 64) AluSz|SINE|Alu 58587 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr10-9140 chr10 128011324 128011534 + 6.25 0.000 intron (NM_001323354, intron 1 of 19) intron (NM_001323354, intron 1 of 19) 13282 NM_001323354 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr2-13990 chr2 190296312 190296522 + 6.25 0.000 intron (NM_198047, intron 3 of 12) AluY|SINE|Alu 23409 NM_198047 26275 Hs.656685 NM_014362 ENSG00000198130 HIBCH HIBYLCOAH 3-hydroxyisobutyryl-CoA hydrolase protein-coding chrX-2667 chrX 115452345 115452555 + 6.25 0.000 Intergenic Intergenic -108724 NM_001282337 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr6-4191 chr6 2863935 2864145 + 6.25 0.000 intron (NR_033851, intron 1 of 1) intron (NR_033851, intron 1 of 1) -9933 NR_039788 100616285 NR_039788 ENSG00000266750 MIR4645 mir-4645 microRNA 4645 ncRNA chr10-5772 chr10 104137439 104137649 + 6.25 0.000 intron (NM_025145, intron 34 of 37) AluJb|SINE|Alu 15373 NM_001002759 119392 Hs.93667 NM_145247 ENSG00000156384 SFR1 C10orf78|MEI5|MEIR5|bA373N18.1 SWI5 dependent homologous recombination repair protein 1 protein-coding chr3-7457 chr3 130843982 130844192 + 6.25 0.000 Intergenic LTR78|LTR|ERV1 -6508 NM_001199181 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr17-6824 chr17 13044834 13045044 + 6.25 0.000 Intergenic Intergenic -26875 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr5-6252 chr5 94780029 94780239 + 6.25 0.000 intron (NM_001297777, intron 15 of 19) intron (NM_001297777, intron 15 of 19) 161465 NM_032290 84250 Hs.657315 NM_032290 ENSG00000133302 SLF1 ANKRD32|BRCTD1|BRCTx SMC5-SMC6 complex localization factor 1 protein-coding chr3-9181 chr3 34679796 34680006 + 6.25 0.000 Intergenic HERV1_I-int|LTR|ERV1 714122 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr6-3400 chr6 73339827 73340037 + 6.25 0.000 Intergenic Intergenic 14344 NM_001025290 340168 Hs.125331 NM_001025290 ENSG00000203909 DPPA5 ESG1 developmental pluripotency associated 5 protein-coding chr5-7743 chr5 60382801 60383011 + 6.25 0.000 intron (NM_001364599, intron 1 of 16) intron (NM_001364599, intron 1 of 16) -10243 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr14-3330 chr14 88938068 88938278 + 6.25 0.000 Intergenic Intergenic 113522 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr17-7703 chr17 32118708 32118918 + 6.25 0.000 Intergenic Intergenic -23641 NM_001288758 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding chr11-5048 chr11 101429022 101429232 + 6.25 0.000 Intergenic L1MA6|LINE|L1 90778 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr2-14519 chr2 228774562 228774772 + 6.25 0.000 Intergenic MER67B|LTR|ERV1 -163272 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr5-3224 chr5 91458504 91458714 + 6.25 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -75292 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr3-6222 chr3 65275263 65275473 + 6.25 0.000 Intergenic Intergenic -587368 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr10-8608 chr10 97165338 97165548 + 6.25 0.000 intron (NR_037909, intron 11 of 14) intron (NR_037909, intron 11 of 14) 20516 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr7-6680 chr7 153099114 153099324 + 6.25 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 313015 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr1-7310 chr1 246518617 246518827 + 6.25 0.000 intron (NR_040002, intron 1 of 2) intron (NR_040002, intron 1 of 2) 5565 NR_040002 255654 Hs.407570 NR_040002 ENSG00000242042 LINC01743 - long intergenic non-protein coding RNA 1743 ncRNA chr2-11105 chr2 129319282 129319492 + 6.25 0.000 Intergenic MER52C|LTR|ERV1 -45496 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chrX-1670 chrX 153739229 153739439 + 6.25 0.000 intron (NM_000033, intron 5 of 9) AluJb|SINE|Alu 14478 NM_000033 215 Hs.159546 NM_000033 ENSG00000101986 ABCD1 ABC42|ALD|ALDP|AMN ATP binding cassette subfamily D member 1 protein-coding chr5-3806 chr5 85293392 85293602 + 6.25 0.000 Intergenic Intergenic -908617 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr3-10556 chr3 141068900 141069110 + 6.25 0.000 intron (NM_080862, intron 2 of 2) intron (NM_080862, intron 2 of 2) 17658 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr20-3249 chr20 190295 190505 + 6.25 0.000 promoter-TSS (NM_001037732) promoter-TSS (NM_001037732) -689 NM_001037732 245939 Hs.516818 NM_001037732 ENSG00000185982 DEFB128 DEFB-28|DEFB28|hBD-28 defensin beta 128 protein-coding chr6-8352 chr6 148386835 148387045 + 6.25 0.000 intron (NM_001346506, intron 1 of 20) intron (NM_001346506, intron 1 of 20) 44102 NM_001346506 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr16-4977 chr16 3567356 3567566 + 6.25 0.000 intron (NR_075083, intron 1 of 20) intron (NR_075083, intron 1 of 20) 9942 NR_075083 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chr2-5434 chr2 120374309 120374519 + 6.25 0.000 Intergenic AluSg|SINE|Alu 28278 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr1-15714 chr1 170032455 170032665 + 6.25 0.000 intron (NM_014970, intron 7 of 19) intron (NM_014970, intron 7 of 19) 36355 NM_001204517 22920 Hs.433442 NM_014970 ENSG00000075945 KIFAP3 FLA3|KAP-1|KAP-3|KAP3|SMAP|Smg-GDS|dJ190I16.1 kinesin associated protein 3 protein-coding chr13-3553 chr13 24665047 24665257 + 6.25 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -15256 NM_001676 479 Hs.147111 NM_001676 ENSG00000075673 ATP12A ATP1AL1|HK ATPase H+/K+ transporting non-gastric alpha2 subunit protein-coding chr3-2826 chr3 15498526 15498736 + 6.25 0.000 5' UTR (NM_080538, exon 1 of 17) 5' UTR (NM_080538, exon 1 of 17) 241 NM_080538 8292 Hs.146735 NM_005677 ENSG00000206561 COLQ CMS5|EAD collagen like tail subunit of asymmetric acetylcholinesterase protein-coding chr4-7636 chr4 83516016 83516226 + 6.25 0.000 Intergenic ERVL-B4-int|LTR|ERVL -19793 NM_001256422 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chrX-4605 chrX 73916915 73917125 + 6.25 0.000 Intergenic Intergenic -27304 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator ncRNA chr12-8067 chr12 116636028 116636238 + 6.25 0.000 Intergenic AluJr|SINE|Alu 76752 NM_001085481 643246 Hs.356061 NM_001085481 ENSG00000258102 MAP1LC3B2 ATG8G microtubule associated protein 1 light chain 3 beta 2 protein-coding chr4-8138 chr4 127449506 127449716 + 6.25 0.000 Intergenic Intergenic -183346 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr7-9154 chr7 112069287 112069497 + 6.25 0.000 intron (NM_001363540, intron 1 of 52) L2c|LINE|L2 137007 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr2-12884 chr2 98363797 98364007 + 6.25 0.000 intron (NM_001079878, intron 1 of 6) L1PA10|LINE|L1 17446 NM_001079878 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr5-6178 chr5 58509396 58509606 + 6.25 0.000 Intergenic L1PB3|LINE|L1 18066 NM_001304429 202309 Hs.547697 NM_152687 ENSG00000175857 GAPT C5orf29 GRB2 binding adaptor protein, transmembrane protein-coding chr15-4530 chr15 55217675 55217885 + 6.25 0.000 intron (NM_183235, intron 6 of 6) intron (NM_183235, intron 6 of 6) -20839 NM_016304 51187 Hs.274772 NM_016304 ENSG00000137876 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding chr2-12384 chr2 53402481 53402691 + 6.25 0.000 Intergenic L2a|LINE|L2 -365197 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr2-10505 chr2 227255431 227255641 + 6.25 0.000 intron (NM_000091, intron 15 of 51) intron (NM_000091, intron 15 of 51) 69628 NR_102371 654841 Hs.659982 NR_102371 ENSG00000236432 LOC654841 - uncharacterized LOC654841 ncRNA chr7-7272 chr7 32281946 32282156 + 6.25 0.000 intron (NM_001322059, intron 1 of 17) L1PA6|LINE|L1 17277 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr14-1935 chr14 22514263 22514473 + 6.25 0.000 Intergenic AluY|SINE|Alu -31409 NR_148361 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr17-4787 chr17 47605162 47605372 + 6.25 0.000 intron (NM_001330257, intron 17 of 23) intron (NM_001330257, intron 17 of 23) -44652 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr6-6830 chr6 7242991 7243201 + 6.25 0.000 intron (NM_001003700, intron 11 of 11) intron (NM_001003700, intron 11 of 11) 70103 NM_003144 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr4-4791 chr4 102950540 102950750 + 6.25 0.000 intron (NR_047513, intron 3 of 10) intron (NR_047513, intron 3 of 10) 69060 NR_047515 150159 Hs.666728 NM_139173 ENSG00000164037 SLC9B1 NHA1|NHEDC1 solute carrier family 9 member B1 protein-coding chr4-6205 chr4 54076545 54076755 + 6.25 0.000 Intergenic Intergenic -12045 NM_012110 26511 Hs.335393 NM_012110 ENSG00000109220 CHIC2 BTL cysteine rich hydrophobic domain 2 protein-coding chr22-1535 chr22 27726786 27726996 + 6.25 0.000 Intergenic Intergenic 74865 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr7-7049 chr7 140036247 140036457 + 6.25 0.000 intron (NR_130117, intron 6 of 10) intron (NR_130117, intron 6 of 10) 27369 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr2-7153 chr2 199557909 199558119 + 6.25 0.000 Intergenic Intergenic -50054 NR_110270 101927641 Hs.549598 NR_110270 ENSG00000238217 LINC01877 - long intergenic non-protein coding RNA 1877 ncRNA chr8-4975 chr8 132113115 132113325 + 6.25 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -7955 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr22-2842 chr22 44326103 44326313 + 6.25 0.000 Intergenic Intergenic -13257 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr2-8323 chr2 107357720 107357930 + 6.25 0.000 Intergenic Intergenic -8300 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr2-12650 chr2 74099713 74099923 + 6.25 0.000 intron (NM_001287491, intron 11 of 11) intron (NM_001287491, intron 11 of 11) 48094 NM_001035505 388962 Hs.61472 NM_212552 ENSG00000163170 BOLA3 MMDS2 bolA family member 3 protein-coding chrX-924 chrX 21941114 21941324 + 6.25 0.000 intron (NM_004595, intron 1 of 10) CpG 510 NM_004595 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr6-4064 chr6 137356274 137356484 + 6.25 0.000 Intergenic Intergenic -136949 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr5-2980 chr5 180089942 180090152 + 6.25 0.000 Intergenic MER96B|DNA|hAT -18288 NM_018434 55819 Hs.484363 NM_018434 ENSG00000113269 RNF130 G1RZFP|GOLIATH|GP ring finger protein 130 protein-coding chr17-7793 chr17 39814489 39814699 + 6.25 0.000 intron (NM_001257409, intron 2 of 5) MLT1C|LTR|ERVL-MaLR -36369 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr7-3619 chr7 36084546 36084756 + 6.25 0.000 Intergenic Intergenic -10659 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr20-3452 chr20 50638385 50638595 + 6.25 0.000 intron (NM_001290268, intron 1 of 21) intron (NM_001290268, intron 1 of 21) -1572 NM_080829 140876 Hs.372578 NM_080829 ENSG00000042062 RIPOR3 C20orf175|C20orf176|FAM65C RIPOR family member 3 protein-coding chr15-2336 chr15 100787889 100788099 + 6.25 0.000 Intergenic Intergenic -61758 NR_160704 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA chr22-2735 chr22 39393416 39393626 + 6.25 0.000 Intergenic AluY|SINE|Alu -6259 NM_006116 10454 Hs.507681 NM_006116 ENSG00000100324 TAB1 3'-Tab1|MAP3K7IP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 protein-coding chr4-6267 chr4 76421126 76421336 + 6.25 0.000 Intergenic CpG -13926 NM_001042784 339965 Hs.529680 NM_178555 ENSG00000163749 CCDC158 - coiled-coil domain containing 158 protein-coding chr2-13284 chr2 128444043 128444253 + 6.25 0.000 Intergenic Intergenic -125280 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr2-13336 chr2 133652554 133652764 + 6.25 0.000 Intergenic Intergenic -84196 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr6-6326 chr6 47919059 47919269 + 6.25 0.000 intron (NM_207499, intron 2 of 2) intron (NM_207499, intron 2 of 2) 132096 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr20-2794 chr20 56269180 56269390 + 6.25 0.000 Intergenic LTR33|LTR|ERVL 20553 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr10-6328 chr10 117360277 117360487 + 6.25 0.000 intron (NM_173791, intron 1 of 4) intron (NM_173791, intron 1 of 4) 15058 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr19-5908 chr19 48403613 48403823 + 6.25 0.000 intron (NM_000836, intron 2 of 12) intron (NM_000836, intron 2 of 12) 8843 NM_000836 2906 Hs.445015 NM_000836 ENSG00000105464 GRIN2D EB11|EIEE46|GluN2D|NMDAR2D|NR2D glutamate ionotropic receptor NMDA type subunit 2D protein-coding chr1-13209 chr1 209313545 209313755 + 6.25 0.000 Intergenic L2b|LINE|L2 -11806 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr15-3941 chr15 40820840 40821050 + 6.25 0.000 intron (NM_001130143, intron 1 of 4) AluJr4|SINE|Alu 7763 NM_001130143 54866 Hs.192927 NM_017726 ENSG00000166143 PPP1R14D CPI17-like|GBPI-1|GBPI1 protein phosphatase 1 regulatory inhibitor subunit 14D protein-coding chr20-3666 chr20 11750800 11751010 + 6.25 0.000 Intergenic MER57D|LTR|ERV1 119810 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr2-6687 chr2 20356093 20356303 + 6.25 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -3945 NM_001352925 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr12-5076 chr12 93249574 93249784 + 6.25 0.000 intron (NR_040096, intron 2 of 4) HUERS-P1-int|LTR|ERV1 75313 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr2-12434 chr2 57812776 57812986 + 6.25 0.000 Intergenic Intergenic -94770 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr15-5167 chr15 92448038 92448248 + 6.25 0.000 intron (NM_001330416, intron 4 of 4) intron (NM_001330416, intron 4 of 4) 23403 NR_126501 104613533 Hs.97584 NR_126501 ENSG00000259170 LOC104613533 - uncharacterized LOC104613533 ncRNA chr10-6444 chr10 27019475 27019685 + 6.25 0.000 intron (NM_014915, intron 29 of 33) intron (NM_014915, intron 29 of 33) -77579 NR_026795 387644 Hs.529965 NR_026795 ENSG00000283709 FAM238C C10orf51|LINC00202|LINC00202-1|NCRNA00202|bB27G4.1 family with sequence similarity 238 member C ncRNA chrX-5014 chrX 118965339 118965549 + 6.25 0.000 Intergenic L2c|LINE|L2 -9170 NR_110311 79836 Hs.144266 NM_024778 ENSG00000175556 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding chr6-7829 chr6 103318826 103319036 + 6.25 0.000 Intergenic Intergenic 1540615 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr1-7448 chr1 55081392 55081602 + 6.25 0.000 intron (NM_015306, intron 58 of 67) intron (NM_015306, intron 58 of 67) 41275 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr15-3088 chr15 63277699 63277909 + 6.25 0.000 intron (NM_031301, intron 1 of 5) CpG 199 NM_031301 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chr16-6017 chr16 8769006 8769216 + 6.25 0.000 intron (NM_020686, intron 11 of 15) intron (NM_020686, intron 11 of 15) 28528 NM_015421 25880 Hs.513330 NM_015421 ENSG00000184857 TMEM186 C16orf51 transmembrane protein 186 protein-coding chr20-3348 chr20 31157726 31157936 + 6.25 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -99833 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr12-6505 chr12 107245332 107245542 + 6.25 0.000 Intergenic Intergenic -72997 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr2-10128 chr2 69603450 69603660 + 6.25 0.000 intron (NM_014911, intron 2 of 21) intron (NM_014911, intron 2 of 21) 40184 NM_014911 22848 Hs.468878 NM_014911 ENSG00000115977 AAK1 - AP2 associated kinase 1 protein-coding chr8-6376 chr8 53879944 53880154 + 6.25 0.000 promoter-TSS (NM_003702) promoter-TSS (NM_003702) -823 NR_104578 8601 Hs.368733 NM_003702 ENSG00000147509 RGS20 RGSZ1|ZGAP1|g(z)GAP|gz-GAP regulator of G protein signaling 20 protein-coding chr1-9146 chr1 19288890 19289100 + 6.25 0.000 promoter-TSS (NM_012067) promoter-TSS (NM_012067) -225 NM_012067 22977 Hs.6980 NM_012067 ENSG00000162482 AKR7A3 AFAR2 aldo-keto reductase family 7 member A3 protein-coding chr9-6353 chr9 15857739 15857949 + 6.25 0.000 intron (NM_001355547, intron 22 of 24) L1MB1|LINE|L1 293866 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr11-6338 chr11 62976066 62976276 + 6.25 0.000 TTS (NM_004790) TTS (NM_004790) 8796 NM_153277 9356 Hs.369252 NM_004790 ENSG00000197901 SLC22A6 HOAT1|OAT1|PAHT|ROAT1 solute carrier family 22 member 6 protein-coding chr4-8581 chr4 168694949 168695159 + 6.25 0.000 intron (NM_001166108, intron 8 of 21) intron (NM_001166108, intron 8 of 21) 63476 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr2-3414 chr2 50472605 50472815 + 6.25 0.000 intron (NM_001330093, intron 15 of 22) MIRb|SINE|MIR -124954 NM_138735 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr3-10932 chr3 174089511 174089721 + 6.25 0.000 intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -168820 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr10-6676 chr10 109469496 109469706 + 6.25 0.000 Intergenic Intergenic 453645 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr12-7534 chr12 70043776 70043986 + 6.25 0.000 Intergenic Intergenic -199149 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr4-6979 chr4 21504984 21505194 + 6.25 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) 39567 NM_001035004 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chrX-3574 chrX 72479331 72479541 + 6.25 0.000 intron (NM_001166448, intron 4 of 4) intron (NM_001166448, intron 4 of 4) 93407 NM_018486 55869 Hs.310536 NM_018486 ENSG00000147099 HDAC8 CDA07|CDLS5|HD8|HDACL1|KDAC8|MRXS6|RPD3|WTS histone deacetylase 8 protein-coding chrX-2972 chrX 24586391 24586601 + 6.25 0.000 intron (NM_004845, intron 5 of 7) intron (NM_004845, intron 5 of 7) 60851 NM_001163265 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr10-7315 chr10 133127074 133127284 + 6.25 0.000 intron (NM_001083909, intron 5 of 6) CpG 24933 NM_001291085 84435 Hs.435183 NM_032422 ENSG00000197177 ADGRA1 GPR123 adhesion G protein-coupled receptor A1 protein-coding chr7-4698 chr7 44400238 44400448 + 6.25 0.000 intron (NM_015332, intron 4 of 5) intron (NM_015332, intron 4 of 5) -74712 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr7-7330 chr7 47347440 47347650 + 6.25 0.000 intron (NM_022748, intron 17 of 30) intron (NM_022748, intron 17 of 30) 117258 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr6-5559 chr6 154317 154527 + 6.25 0.000 Intergenic Intergenic -6263 NR_109817 441123 NR_109817 LINC00266-3 C6orf88|NCRNA00266-3|NCRNA00266C|dJ24O22.2 long intergenic non-protein coding RNA 266-3 ncRNA chr14-4125 chr14 72438114 72438324 + 6.25 0.000 intron (NM_001370288, intron 3 of 16) intron (NM_001370288, intron 3 of 16) -78601 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr8-3860 chr8 34495471 34495681 + 6.25 0.000 Intergenic Intergenic -288345 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr4-6126 chr4 23372834 23373044 + 6.25 0.000 Intergenic AluSx|SINE|Alu 508353 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr7-8085 chr7 25201304 25201514 + 6.25 0.000 Intergenic AluJb|SINE|Alu -21055 NM_001371351 chr7-4795 chr7 88601718 88601928 + 6.25 0.000 Intergenic Intergenic -157877 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chr10-8489 chr10 89426451 89426661 + 6.25 0.000 Intergenic Intergenic 11988 NM_012420 24138 Hs.252839 NM_012420 ENSG00000152778 IFIT5 ISG58|P58|RI58 interferon induced protein with tetratricopeptide repeats 5 protein-coding chr10-6246 chr10 71288523 71288733 + 6.25 0.000 exon (NM_170744, exon 7 of 17) exon (NM_170744, exon 7 of 17) -30625 NM_001363518 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr7-5091 chr7 2586947 2587157 + 6.25 0.000 intron (NM_001287501, intron 10 of 19) L2a|LINE|L2 28073 NM_001287499 23288 Hs.520627 NM_152558 ENSG00000106012 IQCE 1700028P05Rik|PAPA7 IQ motif containing E protein-coding chr9-7068 chr9 125970358 125970568 + 6.25 0.000 Intergenic MIRb|SINE|MIR 222280 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr6-6562 chr6 135646228 135646438 + 6.25 0.000 intron (NR_152842, intron 3 of 5) L1MCa|LINE|L1 148532 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr12-7983 chr12 111168045 111168255 + 6.25 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 68146 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr12-2948 chr12 100541375 100541585 + 6.25 0.000 intron (NR_135146, intron 9 of 10) AluSz6|SINE|Alu -32204 NM_001363672 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr16-5987 chr16 5369497 5369707 + 6.25 0.000 Intergenic Intergenic 246648 NR_110902 101926950 Hs.613285 NR_110902 ENSG00000260338 LINC01570 - long intergenic non-protein coding RNA 1570 ncRNA chr3-7199 chr3 190566516 190566726 + 6.25 0.000 intron (NR_157352, intron 3 of 10) intron (NR_157352, intron 3 of 10) 52536 NM_001167928 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr8-2236 chr8 28902399 28902609 + 6.25 0.000 intron (NM_024567, intron 2 of 10) intron (NM_024567, intron 2 of 10) 11190 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr10-9154 chr10 128549449 128549659 + 6.25 0.000 Intergenic Intergenic 263604 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr3-9602 chr3 56660208 56660418 + 6.25 0.000 intron (NM_001365638, intron 11 of 22) AluSc|SINE|Alu 3733 NM_015224 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chr15-3595 chr15 57861933 57862143 + 6.25 0.000 Intergenic Intergenic 151985 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr10-6931 chr10 52313430 52313640 + 6.25 0.000 promoter-TSS (NM_012242) promoter-TSS (NM_012242) 593 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr12-4104 chr12 58167802 58168012 + 6.25 0.000 Intergenic Intergenic 80015 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chr19-3106 chr19 10789425 10789635 + 6.25 0.000 intron (NM_001005362, intron 7 of 19) FLAM_C|SINE|Alu 9276 NR_039903 100616425 NR_039903 ENSG00000265879 MIR4748 mir-4748 microRNA 4748 ncRNA chr11-7045 chr11 119764397 119764607 + 6.25 0.000 Intergenic Intergenic 34919 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr17-7086 chr17 67820522 67820732 + 6.25 0.000 Intergenic ERVL-B4-int|LTR|ERVL -4876 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr2-6683 chr2 19733681 19733891 + 6.25 0.000 Intergenic Intergenic -135068 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr9-8681 chr9 130670532 130670742 + 6.25 0.000 intron (NM_021619, intron 3 of 4) intron (NM_021619, intron 3 of 4) 6043 NM_021619 59335 Hs.495311 NM_021619 ENSG00000130711 PRDM12 HSAN8|PFM9 PR/SET domain 12 protein-coding chr1-14649 chr1 58143310 58143520 + 6.25 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 107088 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr14-3820 chr14 71298842 71299052 + 6.25 0.000 Intergenic AluSq2|SINE|Alu -21529 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr2-7767 chr2 39688159 39688369 + 6.25 0.000 intron (NM_152390, intron 1 of 3) intron (NM_152390, intron 1 of 3) 22347 NM_152390 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chrX-2390 chrX 71469286 71469496 + 6.25 0.000 intron (NR_104387, intron 38 of 39) intron (NR_104387, intron 38 of 39) 23058 NR_002226 27160 Hs.721806 NR_002226 ENSG00000243468 INGX ING1-like|ING2 inhibitor of growth family, X-linked (pseudogene) pseudo chr1-11961 chr1 74749613 74749823 + 6.25 0.000 intron (NM_138467, intron 4 of 5) AluSc|SINE|Alu -16310 NM_001130043 1429 Hs.83114 NM_001889 ENSG00000116791 CRYZ - crystallin zeta protein-coding chr4-7931 chr4 108644086 108644296 + 6.25 0.000 Intergenic ERVL-E-int|LTR|ERVL -6394 NM_001267817 58505 Hs.445803 NM_021227 ENSG00000198856 OSTC DC2 oligosaccharyltransferase complex non-catalytic subunit protein-coding chr16-6209 chr16 27865743 27865953 + 6.25 0.000 intron (NM_001323901, intron 2 of 5) AluJb|SINE|Alu 22309 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr13-4193 chr13 90588640 90588850 + 6.25 0.000 Intergenic Intergenic 95457 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr10-5436 chr10 78179032 78179242 + 6.25 0.000 Intergenic Intergenic -69488 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA chr11-5560 chr11 100791627 100791837 + 6.25 0.000 intron (NM_001367945, intron 2 of 25) intron (NM_001367945, intron 2 of 25) -103777 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr2-9381 chr2 230343920 230344130 + 6.25 0.000 intron (NM_001352892, intron 2 of 18) L1PA10|LINE|L1 16854 NM_001308163 93349 Hs.589661 NM_138402 ENSG00000185404 SP140L - SP140 nuclear body protein like protein-coding chr7-8654 chr7 71368960 71369170 + 6.25 0.000 intron (NM_022479, intron 2 of 10) intron (NM_022479, intron 2 of 10) -61295 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr10-7840 chr10 44988140 44988350 + 6.25 0.000 intron (NM_032023, intron 6 of 10) MIRb|SINE|MIR -9436 NM_007021 11067 Hs.93675 NM_007021 ENSG00000165507 DEPP1 C10orf10|DEPP|FIG|Fseg DEPP1 autophagy regulator protein-coding chr6-7903 chr6 108924695 108924905 + 6.25 0.000 promoter-TSS (NR_104137) promoter-TSS (NR_104137) -697 NR_104137 101929716 NR_104137 ARMC2-AS1 - ARMC2 antisense RNA 1 ncRNA chr13-3380 chr13 81541288 81541498 + 6.25 0.000 Intergenic L2|LINE|L2 -314410 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr14-5207 chr14 95878494 95878704 + 6.25 0.000 intron (NR_038861, intron 1 of 1) intron (NR_038861, intron 1 of 1) 1827 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR HI-LNC78|LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA chr13-4192 chr13 90294944 90295154 + 6.25 0.000 Intergenic Intergenic 63867 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr9-6386 chr9 31311643 31311853 + 6.25 0.000 Intergenic A-rich|Low_complexity|Low_complexity 69742 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr10-6333 chr10 119288572 119288782 + 6.25 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 81106 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr17-8581 chr17 80274774 80274984 + 6.25 0.000 intron (NM_020954, intron 3 of 16) intron (NM_020954, intron 3 of 16) 14027 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr4-6991 chr4 22754140 22754350 + 6.25 0.000 intron (NR_102357, intron 4 of 4) intron (NR_102357, intron 4 of 4) 40156 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr5-8988 chr5 163743053 163743263 + 6.25 0.000 Intergenic Intergenic 237539 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr5-4397 chr5 178089769 178089979 + 6.25 0.000 Intergenic AluJr4|SINE|Alu -23658 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr7-8956 chr7 98276125 98276335 + 6.25 0.000 Intergenic Intergenic -5456 NM_015379 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr7-5074 chr7 2090526 2090736 + 6.13 0.000 intron (NM_001013837, intron 11 of 18) L1MC3|LINE|L1 -1579 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr10-3505 chr10 70566734 70566944 + 6.13 0.000 3' UTR (NM_014431, exon 20 of 20) 3' UTR (NM_014431, exon 20 of 20) 35902 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr1-13829 chr1 19580535 19580745 + 6.13 0.000 Intergenic L2a|LINE|L2 16192 NR_135054 105378614 Hs.430098 NR_135054 ENSG00000235185 LOC105378614 - uncharacterized LOC105378614 ncRNA chr14-2358 chr14 29465056 29465266 + 6.13 0.000 Intergenic Intergenic 461935 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr8-2966 chr8 68201731 68201941 + 6.13 0.000 intron (NM_024870, intron 37 of 39) intron (NM_024870, intron 37 of 39) -128537 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr6-4415 chr6 27753160 27753370 + 6.13 0.000 Intergenic Intergenic -8479 NR_038929 100131289 Hs.200573 NR_038929 LOC100131289 - uncharacterized LOC100131289 ncRNA chr4-6339 chr4 95032236 95032446 + 6.13 0.000 intron (NM_001256792, intron 1 of 10) MLT1A|LTR|ERVL-MaLR -19336 NM_001256793 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr2-13226 chr2 124167673 124167883 + 6.13 0.000 intron (NM_130773, intron 1 of 23) intron (NM_130773, intron 1 of 23) 142491 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr11-9293 chr11 45212457 45212667 + 6.13 0.000 intron (NM_001256695, intron 5 of 7) intron (NM_001256695, intron 5 of 7) 65219 NM_001256696 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr14-3486 chr14 102430547 102430757 + 6.13 0.000 intron (NM_014844, intron 7 of 19) intron (NM_014844, intron 7 of 19) 67711 NM_014844 9895 Hs.195667 NM_014844 ENSG00000196663 TECPR2 KIAA0329|SPG49 tectonin beta-propeller repeat containing 2 protein-coding chr5-5429 chr5 137254542 137254752 + 6.13 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 126450 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr12-1875 chr12 53652495 53652705 + 6.13 0.000 Intergenic AluJb|SINE|Alu 22819 NM_001330269 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr11-10725 chr11 131607145 131607355 + 6.13 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 56306 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr1-9775 chr1 56142809 56143019 + 6.13 0.000 Intergenic MLT1F-int|LTR|ERVL-MaLR 197827 NR_147161 105378738 Hs.121473 NR_147161 ENSG00000233079 LINC01755 - long intergenic non-protein coding RNA 1755 ncRNA chr2-8632 chr2 144983396 144983606 + 6.13 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 315534 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr6-6778 chr6 3771912 3772122 + 6.13 0.000 Intergenic LTR12C|LTR|ERV1 -20005 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chrX-1808 chrX 93285514 93285724 + 6.13 0.000 Intergenic Intergenic 387959 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr11-6716 chr11 79670972 79671182 + 6.13 0.000 Intergenic L2c|LINE|L2 -230047 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr2-7717 chr2 33926941 33927151 + 6.13 0.000 intron (NR_126403, intron 3 of 5) MLT1C|LTR|ERVL-MaLR -140180 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr2-8101 chr2 76772080 76772290 + 6.13 0.000 intron (NR_146416, intron 1 of 1) MLT1A0|LTR|ERVL-MaLR -213780 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr15-4523 chr15 54162380 54162590 + 6.13 0.000 intron (NM_001329919, intron 4 of 31) L3b|LINE|CR1 149837 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr2-5245 chr2 51028043 51028253 + 6.13 0.000 exon (NM_001330081, exon 2 of 6) exon (NM_001330081, exon 2 of 6) 3984 NM_001330078 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr15-3220 chr15 73422980 73423190 + 6.13 0.000 Intergenic AluSc8|SINE|Alu -20079 NM_001042367 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chr2-5960 chr2 43881740 43881950 + 6.13 0.000 3' UTR (NM_022437, exon 13 of 13) 3' UTR (NM_022437, exon 13 of 13) 42874 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr11-9785 chr11 69784322 69784532 + 6.13 0.000 Intergenic Charlie2a|DNA|hAT-Charlie -9086 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr20-3857 chr20 25573357 25573567 + 6.13 0.000 intron (NM_025176, intron 1 of 23) intron (NM_025176, intron 1 of 23) 12069 NM_025176 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr9-4657 chr9 116521934 116522144 + 6.13 0.000 intron (NR_033973, intron 1 of 11) L1PB1|LINE|L1 17756 NR_033973 100128505 Hs.675821 NR_033973 ENSG00000229105 ASTN2-AS1 - ASTN2 antisense RNA 1 ncRNA chr1-6168 chr1 186134732 186134942 + 6.13 0.000 intron (NM_031935, intron 86 of 106) intron (NM_031935, intron 86 of 106) -161436 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr10-7976 chr10 58999317 58999527 + 6.13 0.000 promoter-TSS (NR_108046) promoter-TSS (NR_108046) -96 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA chr1-14784 chr1 70353534 70353744 + 6.13 0.000 intron (NM_030816, intron 1 of 12) intron (NM_030816, intron 1 of 12) 1083 NM_030816 81573 Hs.744989 NM_030816 ENSG00000118454 ANKRD13C dJ677H15.3 ankyrin repeat domain 13C protein-coding chr6-6413 chr6 85302542 85302752 + 6.13 0.000 Intergenic L1PA6|LINE|L1 87539 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr7-9607 chr7 149150968 149151178 + 6.13 0.000 intron (NM_170686, intron 1 of 5) intron (NM_170686, intron 1 of 5) 3620 NM_170686 57541 Hs.632032 NM_020781 ENSG00000197024 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding chr19-4827 chr19 35992042 35992252 + 6.13 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -3041 NM_001042631 644096 Hs.356460 NM_001042631 ENSG00000205138 SDHAF1 LYRM8 succinate dehydrogenase complex assembly factor 1 protein-coding chr5-7363 chr5 19132948 19133158 + 6.13 0.000 Intergenic L1P3|LINE|L1 753219 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr1-14371 chr1 43388332 43388542 + 6.13 0.000 5' UTR (NM_001001653, exon 2 of 7) 5' UTR (NM_001001653, exon 2 of 7) 1363 NM_052877 112950 Hs.301756 NM_052877 ENSG00000159479 MED8 ARC32 mediator complex subunit 8 protein-coding chr8-4711 chr8 140786603 140786813 + 6.13 0.000 intron (NR_148036, intron 14 of 34) intron (NR_148036, intron 14 of 34) -54055 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr1-13974 chr1 25031868 25032078 + 6.13 0.000 Intergenic Intergenic 8470 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr8-6291 chr8 42605497 42605707 + 6.13 0.000 Intergenic L1MA9|LINE|L1 -63648 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr20-3959 chr20 34500398 34500608 + 6.13 0.000 intron (NM_001257137, intron 24 of 25) L1M2|LINE|L1 -15881 NM_001281729 83658 Hs.593920 NM_014183 ENSG00000125971 DYNLRB1 BITH|BLP|DNCL2A|DNLC2A|ROBLD1 dynein light chain roadblock-type 1 protein-coding chr3-7468 chr3 137027518 137027728 + 6.13 0.000 Intergenic AluJb|SINE|Alu 69640 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr1-11488 chr1 113048015 113048225 + 6.13 0.000 intron (NR_103777, intron 2 of 2) L1PB4|LINE|L1 24982 NR_103777 100996251 Hs.382067 NR_103777 ENSG00000238198 LRIG2-DT - LRIG2 divergent transcript ncRNA chr17-2976 chr17 66222471 66222681 + 6.13 0.000 intron (NM_000042, intron 4 of 7) AluSp|SINE|Alu 6839 NM_000042 350 Hs.445358 NM_000042 ENSG00000091583 APOH B2G1|B2GP1|BG apolipoprotein H protein-coding chr16-6080 chr16 11661926 11662136 + 6.13 0.000 Intergenic AluJr|SINE|Alu -6424 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr6-4301 chr6 14994627 14994837 + 6.13 0.000 Intergenic AluJb|SINE|Alu -251337 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chrX-5282 chrX 140765151 140765361 + 6.13 0.000 intron (NR_104228, intron 3 of 3) intron (NR_104228, intron 3 of 3) 19302 NM_004065 1038 Hs.446675 NM_004065 ENSG00000184258 CDR1 CDR|CDR34|CDR62A cerebellar degeneration related protein 1 protein-coding chr10-6883 chr10 32912759 32912969 + 6.13 0.000 intron (NM_002211, intron 11 of 15) L1PA5|LINE|L1 -11392 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr4-4163 chr4 8289971 8290181 + 6.13 0.000 intron (NM_053044, intron 3 of 8) intron (NM_053044, intron 3 of 8) 20322 NM_001297559 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr2-9279 chr2 221644377 221644587 + 6.13 0.000 Intergenic LTR79|LTR|ERVL -70280 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr9-7977 chr9 92610768 92610978 + 6.13 0.000 intron (NM_001286971, intron 1 of 3) intron (NM_001286971, intron 1 of 3) -7177 NR_036505 100128361 Hs.660395 NR_036505 LOC100128361 - uncharacterized LOC100128361 ncRNA chr3-9674 chr3 63224472 63224682 + 6.13 0.000 Intergenic Intergenic -53731 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr12-6873 chr12 19699715 19699925 + 6.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 259221 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr18-2534 chr18 78675053 78675263 + 6.13 0.000 Intergenic Intergenic -305117 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr7-6944 chr7 94410834 94411044 + 6.13 0.000 exon (NM_000089, exon 22 of 52) exon (NM_000089, exon 22 of 52) 16378 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr16-6545 chr16 64198487 64198697 + 6.13 0.000 Intergenic Intergenic 923471 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-9544 chr1 39926712 39926922 + 6.13 0.000 Intergenic Intergenic -24900 NM_005376 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 MYCL proto-oncogene, bHLH transcription factor protein-coding chr1-8640 chr1 203141090 203141300 + 6.13 0.000 intron (NM_001365066, intron 2 of 2) intron (NM_001365066, intron 2 of 2) 13469 NM_001365065 134 Hs.77867 NM_000674 ENSG00000163485 ADORA1 RDC7 adenosine A1 receptor protein-coding chr16-3237 chr16 85970335 85970545 + 6.13 0.000 Intergenic Intergenic 52093 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr1-15167 chr1 107643801 107644011 + 6.13 0.000 intron (NM_006113, intron 19 of 26) intron (NM_006113, intron 19 of 26) 44593 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr10-7987 chr10 60237052 60237262 + 6.13 0.000 intron (NM_001204403, intron 8 of 43) intron (NM_001204403, intron 8 of 43) -96141 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr1-13178 chr1 205304287 205304497 + 6.13 0.000 exon (NM_030952, exon 7 of 7) exon (NM_030952, exon 7 of 7) 17353 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr9-2246 chr9 71175381 71175591 + 6.13 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) -53865 NM_001366145 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr2-8618 chr2 143222512 143222722 + 6.13 0.000 intron (NM_018460, intron 4 of 13) intron (NM_018460, intron 4 of 13) 93198 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr22-3566 chr22 19129385 19129595 + 6.13 0.000 TTS (NR_134304) TTS (NR_134304) -1818 NM_053006 23617 Hs.694070 NM_053006 ENSG00000206203 TSSK2 DGS-G|SPOGA2|STK22B|TSK2 testis specific serine kinase 2 protein-coding chr6-7304 chr6 44034510 44034720 + 6.13 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) -30965 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr13-3856 chr13 50299968 50300178 + 6.13 0.000 intron (NR_109974, intron 2 of 6) L1ME1|LINE|L1 128055 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr1-10589 chr1 175857941 175858151 + 6.13 0.000 Intergenic Intergenic -19297 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr21-1726 chr21 33104370 33104580 + 6.13 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 19225 NR_109961 101928107 Hs.382669 NR_109961 ENSG00000226527 LOC101928107 - uncharacterized LOC101928107 ncRNA chr10-4397 chr10 51322023 51322233 + 6.13 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 22555 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr17-4944 chr17 77745697 77745907 + 6.13 0.000 Intergenic THE1B|LTR|ERVL-MaLR -17243 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr10-4233 chr10 125425181 125425391 + 6.13 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -149085 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr20-3182 chr20 44909129 44909339 + 6.13 0.000 promoter-TSS (NR_134983) promoter-TSS (NR_134983) -826 NR_134983 80336 Hs.641481 NM_001124756 ENSG00000101104 PABPC1L C20orf119|EPAB|PABPC1L1|dJ1069P2.3 poly(A) binding protein cytoplasmic 1 like protein-coding chr5-8879 chr5 154794014 154794224 + 6.13 0.000 exon (NM_001367718, exon 7 of 19) exon (NM_001367718, exon 7 of 19) -35339 NR_039667 100616306 NR_039667 ENSG00000263361 MIR378H - microRNA 378h ncRNA chr7-9582 chr7 147352542 147352752 + 6.13 0.000 intron (NM_014141, intron 8 of 22) intron (NM_014141, intron 8 of 22) 25474 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr12-6566 chr12 121071614 121071824 + 6.13 0.000 Intergenic L1MB7|LINE|L1 -32477 NM_001261825 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr9-7516 chr9 33305816 33306026 + 6.13 0.000 intron (NM_002504, intron 4 of 23) intron (NM_002504, intron 4 of 23) 15405 NM_147134 4799 Hs.413074 NM_002504 ENSG00000086102 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding chr12-5589 chr12 31722126 31722336 + 6.13 0.000 intron (NR_103522, intron 1 of 8) HERVL40-int|LTR|ERVL 6790 NM_001113402 196394 Hs.585084 NM_001113402 ENSG00000151743 AMN1 - antagonist of mitotic exit network 1 homolog protein-coding chr4-7905 chr4 106320841 106321051 + 6.13 0.000 intron (NM_001142416, intron 1 of 6) SVA_A|Retroposon|SVA -4152 NM_001163436 93627 Hs.151498 NM_033115 ENSG00000145348 TBCK HSPC302|IHPRF3|TBCKL TBC1 domain containing kinase protein-coding chrX-4179 chrX 33948053 33948263 + 6.13 0.000 Intergenic L1MA4|LINE|L1 184172 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr7-5763 chr7 75688055 75688265 + 6.13 0.000 intron (NM_005338, intron 1 of 30) L2c|LINE|L2 50781 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr6-6356 chr6 58256684 58256894 + 6.13 0.000 Intergenic SATR1|Satellite|Satellite -295343 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr21-1583 chr21 15247183 15247393 + 6.13 0.000 Intergenic MER103C|DNA|hAT-Charlie -182288 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr7-9271 chr7 124443680 124443890 + 6.13 0.000 Intergenic Intergenic -91689 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr7-7932 chr7 9239257 9239467 + 6.13 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -394908 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr12-7694 chr12 90080629 90080839 + 6.13 0.000 Intergenic Intergenic 133041 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA chr3-9213 chr3 37680057 37680267 + 6.13 0.000 intron (NM_002207, intron 17 of 27) MIRb|SINE|MIR 181618 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr7-9062 chr7 103989448 103989658 + 6.13 0.000 promoter-TSS (NM_173054) promoter-TSS (NM_173054) -37 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding KI270714.1-4 KI270714.1 2639 2849 + 6.13 0.000 NA NA NA NA chr18-3429 chr18 64028322 64028532 + 6.13 0.000 Intergenic Intergenic 58346 NM_001031848 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr5-5961 chr5 110007035 110007245 + 6.13 0.000 Intergenic Intergenic 123958 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr9-8455 chr9 122785935 122786145 + 6.13 0.000 Intergenic Intergenic -2893 NM_001001923 392391 Hs.534761 NM_001001923 ENSG00000148215 OR5C1 OR5C2P|OR9-31|OR9-F olfactory receptor family 5 subfamily C member 1 protein-coding chr2-6233 chr2 30841640 30841850 + 6.13 0.000 Intergenic L2c|LINE|L2 -34299 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr10-8915 chr10 115348926 115349136 + 6.13 0.000 intron (NM_207303, intron 19 of 28) L1MA4|LINE|L1 255666 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chrX-885 chrX 19910517 19910727 + 6.13 0.000 Intergenic Intergenic -23022 NM_001353891 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr18-1903 chr18 31722476 31722686 + 6.13 0.000 Intergenic Intergenic -37836 NM_004775 9331 Hs.591063 NM_004775 ENSG00000118276 B4GALT6 B4Gal-T6|beta4Gal-T6 beta-1,4-galactosyltransferase 6 protein-coding chr4-7044 chr4 27998561 27998771 + 6.13 0.000 Intergenic L1PB1|LINE|L1 781187 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr3-11214 chr3 194439997 194440207 + 6.13 0.000 intron (NM_001367549, intron 16 of 33) G-rich|Low_complexity|Low_complexity 28137 NM_024524 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr2-10425 chr2 198823072 198823282 + 6.13 0.000 Intergenic LTR12|LTR|ERV1 -448080 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr11-5631 chr11 120367212 120367422 + 6.13 0.000 intron (NM_015313, intron 1 of 40) intron (NM_015313, intron 1 of 40) -18010 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr17-6443 chr17 9142250 9142460 + 6.13 0.000 intron (NM_004822, intron 2 of 6) intron (NM_004822, intron 2 of 6) 36763 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr11-8546 chr11 131760902 131761112 + 6.13 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -97451 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr5-7522 chr5 36996391 36996601 + 6.13 0.000 intron (NM_015384, intron 11 of 45) intron (NM_015384, intron 11 of 45) 119727 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr6-7366 chr6 48476484 48476694 + 6.13 0.000 Intergenic L1MA3|LINE|L1 -407900 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr7-8273 chr7 38198239 38198449 + 6.13 0.000 intron (NM_001363344, intron 2 of 8) MER102b|DNA|hAT-Charlie 20099 NM_001363344 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr4-5348 chr4 184536508 184536718 + 6.13 0.000 intron (NR_147158, intron 1 of 2) intron (NR_147158, intron 1 of 2) 970 NR_147158 105377585 Hs.519127 NR_147158 ENSG00000271538 LINC02427 - long intergenic non-protein coding RNA 2427 ncRNA chr10-6688 chr10 118151743 118151953 + 6.13 0.000 intron (NR_026940, intron 3 of 3) MER65D|LTR|ERV1 -104907 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr8-4865 chr8 48582926 48583136 + 6.13 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 31464 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr9-4496 chr9 37433411 37433621 + 6.13 0.000 intron (NM_012203, intron 8 of 8) AluSx|SINE|Alu 10820 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr2-9875 chr2 203175995 203176205 + 6.13 0.000 intron (NM_001114132, intron 41 of 54) intron (NM_001114132, intron 41 of 54) -62341 NM_177538 57404 Hs.446065 NM_020674 ENSG00000119004 CYP20A1 CYP-M cytochrome P450 family 20 subfamily A member 1 protein-coding chr8-6403 chr8 56193547 56193757 + 6.13 0.000 intron (NM_002655, intron 1 of 4) intron (NM_002655, intron 1 of 4) 17621 NM_001114634 5324 Hs.14968 NM_002655 ENSG00000181690 PLAG1 PSA|SGPA|ZNF912 PLAG1 zinc finger protein-coding chr10-6874 chr10 31420397 31420607 + 6.13 0.000 intron (NM_001323646, intron 4 of 11) MLT1E1|LTR|ERVL-MaLR -20747 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr17-5499 chr17 41990564 41990774 + 6.13 0.000 intron (NM_003315, intron 5 of 13) AluY|SINE|Alu 22872 NM_001330216 1267 Hs.273621 NM_033133 ENSG00000173786 CNP CNP1 2',3'-cyclic nucleotide 3' phosphodiesterase protein-coding chr14-3396 chr14 95373350 95373560 + 6.13 0.000 Intergenic Intergenic 43871 NR_110127 101929080 Hs.525567 NR_110127 ENSG00000258630 LINC02292 - long intergenic non-protein coding RNA 2292 ncRNA chr16-6895 chr16 84670212 84670422 + 6.13 0.000 Intergenic Intergenic 21806 NM_024731 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr18-3573 chr18 79418320 79418530 + 6.13 0.000 intron (NM_001278672, intron 2 of 8) intron (NM_001278672, intron 2 of 8) 18126 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr12-6945 chr12 26407285 26407495 + 6.13 0.000 intron (NM_002223, intron 52 of 56) MER20|DNA|hAT-Charlie 211817 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr6-1915 chr6 36435868 36436078 + 6.13 0.000 intron (NM_152990, intron 2 of 4) HAL1|LINE|L1 -6794 NM_001286580 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr4-7455 chr4 69628945 69629155 + 6.13 0.000 intron (NM_001301239, intron 1 of 4) intron (NM_001301239, intron 1 of 4) 10592 NM_001301233 574537 Hs.225950 NM_001105677 ENSG00000271271 UGT2A2 - UDP glucuronosyltransferase family 2 member A2 protein-coding chr5-3714 chr5 15807929 15808139 + 6.13 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -127148 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr10-6174 chr10 13450199 13450409 + 6.13 0.000 intron (NM_152751, intron 7 of 8) intron (NM_152751, intron 7 of 8) 52672 NM_152751 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr2-9539 chr2 239382336 239382546 + 6.13 0.000 intron (NM_006037, intron 1 of 26) intron (NM_006037, intron 1 of 26) 18508 NM_006037 9759 Hs.20516 NM_006037 ENSG00000068024 HDAC4 AHO3|BDMR|HA6116|HD4|HDAC-4|HDAC-A|HDACA histone deacetylase 4 protein-coding chr19-3954 chr19 57007846 57008056 + 6.13 0.000 Intergenic L2|LINE|L2 -112190 NM_020903 57663 Hs.515632 NM_020903 ENSG00000131864 USP29 HOM-TES-84/86 ubiquitin specific peptidase 29 protein-coding chr11-10608 chr11 124421624 124421834 + 6.13 0.000 Intergenic L2|LINE|L2 3142 NM_001005196 283162 Hs.553671 NM_001005196 ENSG00000280090 OR8B4 OR11-315|OR8B4P olfactory receptor family 8 subfamily B member 4 (gene/pseudogene) protein-coding chr10-4318 chr10 21527034 21527244 + 6.13 0.000 Intergenic CpG -1457 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr5-7706 chr5 57189584 57189794 + 6.13 0.000 intron (NM_001331037, intron 2 of 12) L2c|LINE|L2 14241 NM_001127235 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr19-4764 chr19 30357439 30357649 + 6.13 0.000 Intergenic Intergenic -14840 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr10-5913 chr10 119422319 119422529 + 6.13 0.000 intron (NM_005308, intron 4 of 15) MIRb|SINE|MIR 44452 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chrX-2705 chrX 120315626 120315836 + 6.13 0.000 Intergenic L1M5|LINE|L1 -4195 NM_017938 55026 Hs.437563 NM_017938 ENSG00000125355 TMEM255A FAM70A transmembrane protein 255A protein-coding chr11-9413 chr11 58415832 58416042 + 6.13 0.000 Intergenic L1PA5|LINE|L1 7376 NM_001005566 390190 Hs.553753 NM_001005566 ENSG00000172365 OR5B2 OR11-240|OST073 olfactory receptor family 5 subfamily B member 2 protein-coding chr1-14747 chr1 67449875 67450085 + 6.13 0.000 Intergenic AluSx|SINE|Alu -19578 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr4-3480 chr4 129488534 129488744 + 6.13 0.000 Intergenic Intergenic 282839 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr16-4673 chr16 77922484 77922694 + 6.13 0.000 intron (NM_020927, intron 7 of 8) intron (NM_020927, intron 7 of 8) -99959 NM_005752 10143 Hs.177936 NM_005752 ENSG00000166509 CLEC3A CLECSF1 C-type lectin domain family 3 member A protein-coding chr20-3755 chr20 19407881 19408091 + 6.13 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -123390 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr4-5532 chr4 112745461 112745671 + 6.13 0.000 intron (NM_001354269, intron 1 of 43) AluSp|SINE|Alu 39548 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr10-5222 chr10 62948006 62948216 + 6.13 0.000 Intergenic SVA_E|Retroposon|SVA -128944 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chr17-8592 chr17 80513454 80513664 + 6.13 0.000 Intergenic Intergenic -31279 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr16-2325 chr16 29700645 29700855 + 6.13 0.000 Intergenic Intergenic 21570 NR_134536 23475 Hs.513484 NM_014298 ENSG00000103485 QPRT HEL-S-90n|QPRTase quinolinate phosphoribosyltransferase protein-coding chr1-13162 chr1 202937870 202938080 + 6.13 0.000 Intergenic AluSz|SINE|Alu -9376 NM_001303051 59349 Hs.706793 NM_021633 ENSG00000117153 KLHL12 C3IP1|DKIR kelch like family member 12 protein-coding chr1-14377 chr1 43461218 43461428 + 6.13 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -7334 NM_001190880 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr3-4233 chr3 139899731 139899941 + 6.13 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -35349 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr6-8186 chr6 133136517 133136727 + 6.13 0.000 Intergenic Intergenic 48542 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr12-6161 chr12 8537717 8537927 + 6.13 0.000 intron (NM_014358, intron 3 of 5) LTR13|LTR|ERVK 3083 NM_014358 26253 Hs.236516 NM_014358 ENSG00000166523 CLEC4E CLECSF9|MINCLE C-type lectin domain family 4 member E protein-coding chr5-5244 chr5 119083669 119083879 + 6.13 0.000 intron (NM_001290321, intron 1 of 43) AluSz6|SINE|Alu 12687 NM_001290321 1657 Hs.181042 NM_005509 ENSG00000172869 DMXL1 - Dmx like 1 protein-coding chr15-4518 chr15 53294983 53295193 + 6.13 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 178723 NR_147181 105370822 Hs.527821 NR_147181 ENSG00000259237 LINC02490 - long intergenic non-protein coding RNA 2490 ncRNA chr1-15715 chr1 170101798 170102008 + 6.13 0.000 Intergenic L2c|LINE|L2 -27165 NM_001204514 22920 Hs.433442 NM_014970 ENSG00000075945 KIFAP3 FLA3|KAP-1|KAP-3|KAP3|SMAP|Smg-GDS|dJ190I16.1 kinesin associated protein 3 protein-coding chr4-4646 chr4 81747641 81747851 + 6.13 0.000 Intergenic LTR16B1|LTR|ERVL -275839 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr11-4574 chr11 126432387 126432597 + 6.13 0.000 intron (NM_001301097, intron 12 of 15) MIR3|SINE|MIR 26405 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr7-7059 chr7 148692886 148693096 + 6.13 0.000 Intergenic AluJb|SINE|Alu -4765 NM_001370660 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr5-7573 chr5 40902697 40902907 + 6.13 0.000 Intergenic AluJr|SINE|Alu -6695 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 - complement C7 protein-coding chr13-1909 chr13 51089152 51089362 + 6.13 0.000 intron (NR_102432, intron 1 of 3) intron (NR_102432, intron 1 of 3) 21971 NM_001351589 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chrX-2572 chrX 103248677 103248887 + 6.13 0.000 Intergenic Intergenic 6373 NM_153333 90843 Hs.389734 NM_153333 ENSG00000180964 TCEAL8 WEX3 transcription elongation factor A like 8 protein-coding chr21-834 chr21 44603519 44603729 + 6.13 0.000 intron (NM_144991, intron 1 of 11) intron (NM_144991, intron 1 of 11) 3027 NM_198689 386675 Hs.473999 NM_198689 ENSG00000272804 KRTAP10-7 KAP10.7|KAP18.7|KRTAP18-7 keratin associated protein 10-7 protein-coding chr6-3618 chr6 110590496 110590706 + 6.13 0.000 Intergenic MamRep605|LTR?|LTR? -113988 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chrX-5434 chrX 153807398 153807608 + 6.13 0.000 intron (NM_001303516, intron 2 of 7) intron (NM_001303516, intron 2 of 7) 12835 NM_006280 6748 Hs.409223 NM_006280 ENSG00000180879 SSR4 CDG1Y|TRAPD signal sequence receptor subunit 4 protein-coding chr6-8053 chr6 121354750 121354960 + 6.13 0.000 Intergenic AluJb|SINE|Alu -20126 NM_001367759 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr6-7227 chr6 40514204 40514414 + 6.13 0.000 intron (NM_020737, intron 1 of 2) AluSx|SINE|Alu 73055 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr3-9744 chr3 68904504 68904714 + 6.13 0.000 intron (NM_001005527, intron 1 of 5) LTR16E1|LTR|ERVL 27938 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chrX-2201 chrX 40773843 40774053 + 6.13 0.000 Intergenic Intergenic -38406 NM_004229 9282 Hs.407604 NM_004229 ENSG00000180182 MED14 CRSP150|CRSP2|CSRP|CXorf4|DRIP150|EXLM1|RGR1|TRAP170 mediator complex subunit 14 protein-coding chr5-5161 chr5 108887798 108888008 + 6.13 0.000 intron (NR_146155, intron 8 of 19) intron (NR_146155, intron 8 of 19) -36703 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr14-841 chr14 77498729 77498939 + 6.13 0.000 promoter-TSS (NM_182509) promoter-TSS (NM_182509) -18 NM_199296 145501 Hs.29742 NM_182509 ENSG00000100593 ISM2 TAIL1|THSD3 isthmin 2 protein-coding chrX-1581 chrX 73447117 73447327 + 6.13 0.000 promoter-TSS (NM_005193) promoter-TSS (NM_005193) -32 NM_005193 1046 Hs.553488 NM_005193 ENSG00000131264 CDX4 - caudal type homeobox 4 protein-coding chr8-2328 chr8 5999175 5999385 + 6.13 0.000 Intergenic Intergenic 407268 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr18-2494 chr18 54078114 54078324 + 6.13 0.000 Intergenic AluSx3|SINE|Alu 144193 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr1-15668 chr1 165970365 165970575 + 6.13 0.000 Intergenic Intergenic 62549 NR_037431 100500832 NR_037431 ENSG00000283936 MIR3658 - microRNA 3658 ncRNA chr12-3922 chr12 131783481 131783691 + 6.13 0.000 intron (NM_004592, intron 14 of 17) AluY|SINE|Alu -44807 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr9-8842 chr9 135548753 135548963 + 6.13 0.000 intron (NM_014582, intron 5 of 6) intron (NM_014582, intron 5 of 6) 2732 NM_014582 29991 Hs.567489 NM_014582 ENSG00000122136 OBP2A LCN13|OBP|OBP2C|OBPIIa|hOBPIIa odorant binding protein 2A protein-coding chr17-8438 chr17 76829358 76829568 + 6.13 0.000 Intergenic AluSx1|SINE|Alu -26703 NR_135283 283994 Hs.645372 NR_135283 ENSG00000267535 LINC00868 C17orf52 long intergenic non-protein coding RNA 868 ncRNA chr3-7899 chr3 133532111 133532321 + 6.13 0.000 Intergenic Intergenic -41070 NR_135276 85003 Hs.659202 NR_135276 ENSG00000249993 BFSP2-AS1 - BFSP2 antisense RNA 1 ncRNA chr10-8718 chr10 102707471 102707681 + 6.13 0.000 intron (NM_004311, intron 1 of 5) intron (NM_004311, intron 1 of 5) 6821 NM_004311 403 Hs.182215 NM_004311 ENSG00000138175 ARL3 ARFL3|JBTS35|RP83 ADP ribosylation factor like GTPase 3 protein-coding chr10-9163 chr10 129225514 129225724 + 6.13 0.000 Intergenic Intergenic -241622 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr5-6739 chr5 76690008 76690218 + 6.13 0.000 intron (NM_006633, intron 30 of 35) intron (NM_006633, intron 30 of 35) -22290 NR_028375 100302746 NR_028375 NCRUPAR NCRNA00193|ncR-uPAR non-protein coding RNA, upstream of F2R/PAR1 ncRNA chr1-8041 chr1 240228293 240228503 + 6.13 0.000 intron (NM_020066, intron 6 of 17) L1M4b|LINE|L1 136515 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr13-3578 chr13 26976304 26976514 + 6.13 0.000 Intergenic Intergenic -149124 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr2-10142 chr2 73716515 73716725 + 6.13 0.000 Intergenic Intergenic -15280 NR_132338 51471 Hs.278983 NM_016347 ENSG00000204872 NAT8B CML2|Hcml2|NAT8BP N-acetyltransferase 8B (putative, gene/pseudogene) protein-coding chrX-2865 chrX 142800823 142801033 + 6.13 0.000 Intergenic L3|LINE|CR1 -225000 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr2-14512 chr2 228056150 228056360 + 6.13 0.000 intron (NM_030623, intron 3 of 10) L2b|LINE|L2 125390 NM_030623 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr16-6220 chr16 28253061 28253271 + 6.13 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -39359 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr3-9561 chr3 53640126 53640336 + 6.13 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 145620 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr11-7855 chr11 117874838 117875048 + 6.13 0.000 intron (NM_001164836, intron 1 of 9) intron (NM_001164836, intron 1 of 9) 1715 NM_001164836 53826 Hs.744850 NM_022003 ENSG00000137726 FXYD6 - FXYD domain containing ion transport regulator 6 protein-coding chr4-5437 chr4 18251144 18251354 + 6.13 0.000 Intergenic Intergenic -229374 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr8-4487 chr8 118556119 118556329 + 6.13 0.000 intron (NM_001101676, intron 2 of 4) intron (NM_001101676, intron 2 of 4) -64777 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr12-7542 chr12 70733571 70733781 + 6.13 0.000 intron (NM_130846, intron 2 of 9) intron (NM_130846, intron 2 of 9) 20932 NR_073474 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr10-7210 chr10 114883251 114883461 + 6.13 0.000 intron (NM_001135051, intron 16 of 16) intron (NM_001135051, intron 16 of 16) -54839 NM_139169 142940 Hs.21187 NM_139169 ENSG00000165832 TRUB1 PUS4 TruB pseudouridine synthase family member 1 protein-coding chr6-5699 chr6 126210834 126211044 + 6.13 0.000 Intergenic Intergenic -128850 NM_001012507 387103 Hs.486401 NM_001012507 ENSG00000203760 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding chr4-3121 chr4 168815924 168816134 + 6.13 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -16066 NM_001367569 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr8-7533 chr8 144178621 144178831 + 6.13 0.000 intron (NM_001099281, intron 3 of 11) intron (NM_001099281, intron 3 of 11) 30081 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr1-10869 chr1 205521639 205521849 + 6.13 0.000 intron (NM_002596, intron 1 of 15) intron (NM_002596, intron 1 of 15) 17075 NM_002596 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr4-7588 chr4 80646407 80646617 + 6.13 0.000 intron (NM_001206997, intron 4 of 6) intron (NM_001206997, intron 4 of 6) 310792 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr10-6807 chr10 13912997 13913207 + 6.13 0.000 intron (NM_018027, intron 2 of 24) L1MB8|LINE|L1 58794 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr5-8921 chr5 157479748 157479958 + 6.13 0.000 3' UTR (NM_033274, exon 23 of 23) 3' UTR (NM_033274, exon 23 of 23) -19753 NR_136205 102724404 Hs.570889 NR_136204 LOC102724404 - uncharacterized LOC102724404 ncRNA chr3-11164 chr3 190012553 190012763 + 6.13 0.000 intron (NM_001134418, intron 1 of 14) L2b|LINE|L2 108239 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr17-8536 chr17 79427282 79427492 + 6.13 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 88761 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr3-9071 chr3 26498728 26498938 + 6.13 0.000 Intergenic Intergenic -123973 NM_052953 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chrX-3815 chrX 143915695 143915905 + 6.13 0.000 Intergenic Intergenic 31729 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr17-7868 chr17 42615002 42615212 + 6.13 0.000 3' UTR (NM_001070, exon 11 of 11) 3' UTR (NM_001070, exon 11 of 11) 5424 NM_001070 7283 Hs.279669 NM_001070 ENSG00000131462 TUBG1 CDCBM4|GCP-1|TUBG|TUBGCP1 tubulin gamma 1 protein-coding chr7-6863 chr7 48781124 48781334 + 6.13 0.000 Intergenic L1MCa|LINE|L1 -143318 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr3-7402 chr3 99721310 99721520 + 6.13 0.000 intron (NM_001850, intron 2 of 4) G-rich|Low_complexity|Low_complexity 82821 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chrX-1851 chrX 111193210 111193420 + 6.13 0.000 intron (NM_001128172, intron 10 of 14) intron (NM_001128172, intron 10 of 14) 70238 NM_001128172 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr7-5203 chr7 11973052 11973262 + 6.13 0.000 Intergenic LTR8A|LTR|ERV1 -140959 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr20-1359 chr20 37005777 37005987 + 6.13 0.000 intron (NM_002895, intron 20 of 21) AluJo|SINE|Alu -54039 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr3-8583 chr3 157204680 157204890 + 6.13 0.000 Intergenic Intergenic -44025 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr1-15136 chr1 103190917 103191127 + 6.13 0.000 Intergenic Intergenic -82500 NM_080630 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr3-9578 chr3 54697521 54697731 + 6.13 0.000 intron (NM_018398, intron 11 of 37) intron (NM_018398, intron 11 of 37) -57769 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr6-7118 chr6 35267553 35267763 + 6.13 0.000 intron (NM_001292032, intron 1 of 12) L2a|LINE|L2 7923 NM_001292032 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr10-6392 chr10 4684433 4684643 + 6.13 0.000 Intergenic L2c|LINE|L2 -6468 NR_024475 100216001 Hs.634869 NR_024475 ENSG00000231298 MANCR LINC00704 mitotically associated long non coding RNA ncRNA chr7-6826 chr7 38615434 38615644 + 6.13 0.000 intron (NM_001635, intron 1 of 20) intron (NM_001635, intron 1 of 20) 15834 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr13-3063 chr13 36363638 36363848 + 6.13 0.000 intron (NR_045180, intron 2 of 5) intron (NR_045180, intron 2 of 5) 6437 NM_001142294 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding chr11-8437 chr11 111238101 111238311 + 6.13 0.000 Intergenic Intergenic -7519 NM_198498 341032 Hs.298685 NM_198498 ENSG00000150750 C11orf53 - chromosome 11 open reading frame 53 protein-coding chr3-10868 chr3 169179658 169179868 + 6.13 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -32292 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr10-6361 chr10 132077193 132077403 + 6.13 0.000 intron (NM_001323086, intron 1 of 23) intron (NM_001323086, intron 1 of 23) 11352 NM_001323087 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr7-6767 chr7 15417326 15417536 + 6.13 0.000 intron (NM_001004320, intron 5 of 12) intron (NM_001004320, intron 5 of 12) 144584 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chr4-7076 chr4 31729334 31729544 + 6.13 0.000 Intergenic Intergenic 222895 NR_149122 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr7-5138 chr7 5441470 5441680 + 6.13 0.000 Intergenic Intergenic -12648 NM_001354886 100129484 Hs.147507 NM_001354886 LOC100129484 - uncharacterized LOC100129484 protein-coding chr17-7642 chr17 29115288 29115498 + 6.13 0.000 exon (NM_203318, exon 13 of 41) exon (NM_203318, exon 13 of 41) 24996 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr15-3269 chr15 76601966 76602176 + 6.13 0.000 intron (NR_148227, intron 22 of 32) MER8|DNA|TcMar-Tigger 15424 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr16-5730 chr16 84574196 84574406 + 6.13 0.000 intron (NM_021149, intron 3 of 3) intron (NM_021149, intron 3 of 3) 43777 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr3-9798 chr3 73017128 73017338 + 6.13 0.000 intron (NM_001318025, intron 2 of 7) intron (NM_001318025, intron 2 of 7) 20422 NM_001318027 151987 Hs.431092 NM_174907 ENSG00000163605 PPP4R2 PP4R2 protein phosphatase 4 regulatory subunit 2 protein-coding chr13-1450 chr13 73209418 73209628 + 6.13 0.000 Intergenic Intergenic 150518 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr2-12594 chr2 70820374 70820584 + 6.13 0.000 exon (NM_001258027, exon 1 of 7) exon (NM_001258027, exon 1 of 7) 120 NM_173535 165530 Hs.681239 NM_173535 ENSG00000152672 CLEC4F CLECSF13|KCLR C-type lectin domain family 4 member F protein-coding chr15-3615 chr15 69299529 69299739 + 6.13 0.000 intron (NM_017705, intron 1 of 8) intron (NM_017705, intron 1 of 8) 722 NM_017705 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chr5-8598 chr5 138370467 138370677 + 6.13 0.000 intron (NM_016604, intron 1 of 23) intron (NM_016604, intron 1 of 23) 17887 NM_016604 51780 Hs.483486 NM_016604 ENSG00000120733 KDM3B 5qNCA|C5orf7|JMJD1B|NET22 lysine demethylase 3B protein-coding chr1-14576 chr1 53363328 53363538 + 6.13 0.000 Intergenic Intergenic 35200 NR_131923 105378732 Hs.118609 NR_131923 ENSG00000225675 LINC01771 - long intergenic non-protein coding RNA 1771 ncRNA chr4-5706 chr4 32786833 32787043 + 6.13 0.000 Intergenic AluSg|SINE|Alu 435900 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr14-1750 chr14 72682122 72682332 + 6.13 0.000 intron (NM_001280544, intron 7 of 9) AluSg|SINE|Alu 165407 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr1-13577 chr1 8217454 8217664 + 6.13 0.000 Intergenic CpG 8887 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr8-6584 chr8 71370902 71371112 + 6.13 0.000 intron (NM_001370336, intron 2 of 17) HAL1|LINE|L1 -8938 NM_001288574 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr4-7201 chr4 41658327 41658537 + 6.13 0.000 intron (NM_001330786, intron 10 of 22) intron (NM_001330786, intron 10 of 22) 45530 NM_001330983 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr3-8543 chr3 144542173 144542383 + 6.13 0.000 Intergenic L1PA15|LINE|L1 569197 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr4-7927 chr4 108332364 108332574 + 6.13 0.000 Intergenic LTR81C|LTR|Gypsy 160349 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr5-5284 chr5 123975755 123975965 + 6.13 0.000 Intergenic MSTA|LTR|ERVL-MaLR 430443 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr11-10106 chr11 86819374 86819584 + 6.13 0.000 intron (NR_120591, intron 1 of 4) intron (NR_120591, intron 1 of 4) 18937 NR_120592 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr4-3962 chr4 183067090 183067300 + 6.13 0.000 Intergenic AluSg4|SINE|Alu 29530 NR_003612 403315 Hs.652187 NR_003612 ENSG00000230219 FAM92A1P2 FAM92A3 family with sequence similarity 92, member A3 pseudo chr16-6798 chr16 79057587 79057797 + 6.13 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 543045 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr11-8531 chr11 127449815 127450025 + 6.13 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 178850 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr16-4505 chr16 58066263 58066473 + 6.13 0.000 Intergenic Intergenic 40614 NM_002428 4324 Hs.80343 NM_002428 ENSG00000102996 MMP15 MMP-15|MT2-MMP|MT2MMP|MTMMP2|SMCP-2 matrix metallopeptidase 15 protein-coding chrX-4169 chrX 32276380 32276590 + 6.13 0.000 intron (NM_000109, intron 43 of 78) L1MA2|LINE|L1 -121016 NM_004023 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr5-4015 chr5 32346755 32346965 + 6.13 0.000 Intergenic MER41-int|LTR|ERV1 -33921 NM_001294344 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr19-6752 chr19 39275026 39275236 + 6.13 0.000 Intergenic MER57A1|LTR|ERV1 6614 NM_172138 282616 Hs.567792 NM_172138 ENSG00000183709 IFNL2 IL-28A|IL28A interferon lambda 2 protein-coding chr7-6568 chr7 68840116 68840326 + 6.13 0.000 Intergenic AluSz|SINE|Alu 757403 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr7-5358 chr7 30667995 30668205 + 6.13 0.000 intron (NM_001202481, intron 4 of 13) intron (NM_001202481, intron 4 of 13) 14356 NM_001883 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr15-3395 chr15 88725304 88725514 + 6.13 0.000 Intergenic Intergenic -78027 NM_001369268 176 Hs.2159 NM_001135 ENSG00000157766 ACAN AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD aggrecan protein-coding chr6-6029 chr6 118230245 118230455 + 6.13 0.000 intron (NM_001029858, intron 2 of 7) AluSc|SINE|Alu 144447 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr4-6434 chr4 134948194 134948404 + 6.13 0.000 Intergenic LTR12C|LTR|ERV1 175260 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chrX-2322 chrX 56024446 56024656 + 6.13 0.000 intron (NM_001324104, intron 2 of 6) LTR2B|LTR|ERV1 116266 NM_001324104 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr5-4027 chr5 35336661 35336871 + 6.13 0.000 Intergenic Intergenic -106279 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr2-13016 chr2 107772242 107772452 + 6.13 0.000 intron (NR_126370, intron 2 of 4) intron (NR_126370, intron 2 of 4) 18235 NR_126369 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chr15-2686 chr15 79739573 79739783 + 6.13 0.000 Intergenic LTR16E2|LTR|ERVL 157319 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr10-5053 chr10 37265403 37265613 + 6.13 0.000 Intergenic Intergenic -43678 NR_104061 101929520 Hs.144151 NR_104061 ENSG00000235687 LINC00993 - long intergenic non-protein coding RNA 993 ncRNA chr20-3726 chr20 17351038 17351248 + 6.13 0.000 intron (NM_002594, intron 2 of 11) intron (NM_002594, intron 2 of 11) 124103 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr10-5006 chr10 32763932 32764142 + 6.13 0.000 intron (NM_001321115, intron 29 of 43) L1MB1|LINE|L1 137435 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr13-3079 chr13 44301201 44301411 + 6.13 0.000 Intergenic Intergenic -72344 NM_001346980 387923 Hs.377972 NM_001010897 ENSG00000151778 SERP2 C13orf21|bA269C23.1 stress associated endoplasmic reticulum protein family member 2 protein-coding chr14-3600 chr14 45256826 45257036 + 6.13 0.000 Intergenic LTR16B1|LTR|ERVL -3729 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding chr20-4240 chr20 48475738 48475948 + 6.13 0.000 Intergenic D20S16|Satellite|Satellite 115932 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chrX-4629 chrX 77836578 77836788 + 6.13 0.000 intron (NM_032121, intron 8 of 9) AluJo|SINE|Alu -50467 NM_138270 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr6-5671 chr6 105456149 105456359 + 6.13 0.000 Intergenic L3|LINE|CR1 -53172 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr3-9707 chr3 65828724 65828934 + 6.13 0.000 intron (NM_001365904, intron 1 of 24) MLT1E2|LTR|ERVL-MaLR -64987 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr5-4797 chr5 57384811 57385021 + 6.13 0.000 Intergenic Intergenic 97895 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr18-2979 chr18 23407622 23407832 + 6.13 0.000 intron (NR_148382, intron 1 of 12) L1M5|LINE|L1 30234 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr4-8599 chr4 170250126 170250336 + 6.13 0.000 intron (NR_125889, intron 1 of 2) intron (NR_125889, intron 1 of 2) 23640 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chrX-2099 chrX 24100824 24101034 + 6.13 0.000 Intergenic L1M4a1|LINE|L1 45973 NM_001415 1968 Hs.539684 NM_001415 ENSG00000130741 EIF2S3 EIF2|EIF2G|EIF2gamma|MEHMO|MRXSBRK|eIF-2gA eukaryotic translation initiation factor 2 subunit gamma protein-coding chr17-8329 chr17 72998779 72998989 + 6.13 0.000 intron (NM_001352692, intron 4 of 9) intron (NM_001352692, intron 4 of 9) 93804 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr11-10602 chr11 124208623 124208833 + 6.13 0.000 Intergenic L2c|LINE|L2 -15911 NM_001291438 26492 Hs.381319 NM_001291438 OR8G2P HSTPCR120|OR8G2|OR8G4|ORL206|ORL486|TPCR120 olfactory receptor family 8 subfamily G member 2 pseudogene protein-coding chr10-6459 chr10 31676127 31676337 + 6.13 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 232694 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr6-3822 chr6 35586523 35586733 + 6.13 0.000 3' UTR (NM_001145777, exon 7 of 7) 3' UTR (NM_001145777, exon 7 of 7) -73732 NM_003322 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr3-8179 chr3 38855101 38855311 + 6.13 0.000 intron (NM_014139, intron 24 of 25) L1PBa|LINE|L1 -61196 NM_006514 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr12-3884 chr12 117038729 117038939 + 6.13 0.000 TTS (NM_017899) TTS (NM_017899) -51497 NR_103809 100506551 Hs.657861 NR_103809 ENSG00000257279 LOC100506551 - uncharacterized LOC100506551 ncRNA chr6-3715 chr6 1312395 1312605 + 6.13 0.000 5' UTR (NM_033260, exon 1 of 1) 5' UTR (NM_033260, exon 1 of 1) 402 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr15-4296 chr15 38502978 38503188 + 6.13 0.000 intron (NM_001306086, intron 10 of 14) intron (NM_001306086, intron 10 of 14) 48956 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr6-5885 chr6 42685379 42685589 + 6.13 0.000 intron (NM_015255, intron 44 of 46) AluSx3|SINE|Alu 37113 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr5-5917 chr5 54615978 54616188 + 6.13 0.000 Intergenic Intergenic 87241 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr4-8587 chr4 168931323 168931533 + 6.13 0.000 Intergenic L1M2c|LINE|L1 78827 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr15-4045 chr15 64566785 64566995 + 6.13 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 67470 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr4-7335 chr4 56829930 56830140 + 6.13 0.000 Intergenic AluSp|SINE|Alu -8166 NM_021114 6691 Hs.98243 NM_021114 ENSG00000128040 SPINK2 HUSI-II|SPGF29 serine peptidase inhibitor, Kazal type 2 protein-coding chrX-2632 chrX 109997786 109997996 + 6.13 0.000 Intergenic Intergenic -4744 NM_001353851 84187 Hs.496572 NM_017698 ENSG00000157600 TMEM164 bB360B22.3 transmembrane protein 164 protein-coding chr10-3957 chr10 106805957 106806167 + 6.13 0.000 intron (NM_001206569, intron 3 of 25) AluY|SINE|Alu 358644 NM_052918 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr6-2080 chr6 136782322 136782532 + 6.13 0.000 intron (NM_005923, intron 1 of 29) intron (NM_005923, intron 1 of 29) -1620 NR_134635 101928429 Hs.672896 NR_134635 LOC101928429 - uncharacterized LOC101928429 ncRNA chr9-8723 chr9 131855355 131855565 + 6.13 0.000 Intergenic Intergenic -115516 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr1-12931 chr1 119862085 119862295 + 6.13 0.000 Intergenic Intergenic -17310 NM_001047980 343505 NM_001047980 NBPF7 - NBPF member 7 protein-coding chr3-3205 chr3 193241299 193241509 + 6.13 0.000 promoter-TSS (NR_026877) promoter-TSS (NR_026877) 182 NM_020386 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr9-7880 chr9 87670328 87670538 + 6.13 0.000 intron (NM_004938, intron 19 of 25) intron (NM_004938, intron 19 of 25) -55686 NM_001912 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr22-3429 chr22 39151874 39152084 + 6.13 0.000 intron (NM_001346744, intron 1 of 5) intron (NM_001346744, intron 1 of 5) 701 NM_001346743 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr19-5022 chr19 47894519 47894729 + 6.13 0.000 Intergenic AluY|SINE|Alu -8309 NM_003167 6822 Hs.515835 NM_003167 ENSG00000105398 SULT2A1 DHEA-ST|DHEAS|HST|ST2|ST2A1|ST2A3|STD|hSTa sulfotransferase family 2A member 1 protein-coding chr11-10605 chr11 124277722 124277932 + 6.13 0.000 Intergenic L1PB1|LINE|L1 13000 NM_001005198 219865 Hs.722725 NM_001005198 ENSG00000255298 OR8G5 OR11-298|OR8G5P|OR8G6 olfactory receptor family 8 subfamily G member 5 protein-coding chr1-7778 chr1 43058570 43058780 + 6.13 0.000 Intergenic Intergenic -89229 NM_001101376 440585 Hs.657614 NM_001101376 ENSG00000186973 FAM183A - family with sequence similarity 183 member A protein-coding chr1-12679 chr1 47508175 47508385 + 6.13 0.000 Intergenic CpG -70963 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr7-8814 chr7 83584037 83584247 + 6.13 0.000 intron (NM_012431, intron 1 of 16) intron (NM_012431, intron 1 of 16) 57289 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr14-4588 chr14 50320313 50320523 + 6.13 0.000 intron (NM_001370605, intron 2 of 5) intron (NM_001370605, intron 2 of 5) 8094 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr11-7592 chr11 39849209 39849419 + 6.13 0.000 Intergenic L1PA2|LINE|L1 443816 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr6-8122 chr6 127512293 127512503 + 6.13 0.000 intron (NM_001012279, intron 4 of 11) L3|LINE|CR1 6626 NM_001012279 387104 Hs.319247 NM_001012279 ENSG00000255330 SOGA3 C6orf174|dJ403A15.3 SOGA family member 3 protein-coding chr10-7846 chr10 45754162 45754372 + 6.13 0.000 intron (NM_001367411, intron 13 of 30) intron (NM_001367411, intron 13 of 30) 27001 NM_001367399 253725 Hs.365286 NM_015262 ENSG00000172661 WASHC2C FAM21A|FAM21C|VPEF WASH complex subunit 2C protein-coding chr2-10793 chr2 45018163 45018373 + 6.13 0.000 Intergenic Intergenic -8816 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr3-11190 chr3 193158252 193158462 + 6.13 0.000 Intergenic Intergenic -82865 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr18-2933 chr18 13454542 13454752 + 6.13 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -5300 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr9-8330 chr9 115115159 115115369 + 6.13 0.000 intron (NM_002160, intron 1 of 27) intron (NM_002160, intron 1 of 27) 2893 NM_002160 3371 Hs.143250 NM_002160 ENSG00000041982 TNC 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C tenascin C protein-coding chr8-3184 chr8 103308393 103308603 + 6.13 0.000 promoter-TSS (NR_145795) promoter-TSS (NR_145795) -480 NR_145795 109623480 NR_145795 SNORD173 - small nucleolar RNA, C/D box 173 snoRNA chr11-5318 chr11 48966381 48966591 + 6.13 0.000 Intergenic Intergenic -65114 NM_001206626 283116 Hs.448644 NM_001206626 ENSG00000182053 TRIM49B - tripartite motif containing 49B protein-coding chr17-7431 chr17 10852430 10852640 + 6.13 0.000 Intergenic AluY|SINE|Alu -14448 NM_001101387 644139 Hs.553909 NM_001101387 ENSG00000233670 PIRT - phosphoinositide interacting regulator of transient receptor potential channels protein-coding KI270728.1-2 KI270728.1 1561702 1561912 + 6.13 0.000 NA NA NA NA chr5-7562 chr5 39756502 39756712 + 6.13 0.000 Intergenic Intergenic 236176 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr6-6263 chr6 34979434 34979644 + 6.13 0.000 intron (NM_015245, intron 3 of 23) intron (NM_015245, intron 3 of 23) 90284 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr6-3516 chr6 35521488 35521698 + 6.13 0.000 Intergenic Intergenic -8697 NM_003322 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr22-2102 chr22 26606862 26607072 + 6.13 0.000 intron (NM_001887, intron 4 of 5) intron (NM_001887, intron 4 of 5) 11060 NM_001887 1414 Hs.37135 NM_001887 ENSG00000100122 CRYBB1 CATCN3|CTRCT17 crystallin beta B1 protein-coding chr22-4059 chr22 42308496 42308706 + 6.13 0.000 Intergenic Intergenic -24674 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr4-7744 chr4 93016376 93016586 + 6.13 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 712082 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr2-4798 chr2 42503971 42504181 + 6.13 0.000 intron (NM_001282755, intron 2 of 17) AluSq2|SINE|Alu 9507 NM_001282755 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr12-5660 chr12 85405861 85406071 + 6.13 0.000 Intergenic Intergenic 125746 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr6-8230 chr6 136532066 136532276 + 6.13 0.000 intron (NM_001198617, intron 1 of 15) intron (NM_001198617, intron 1 of 15) -5461 NM_001198619 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr17-5115 chr17 6086171 6086381 + 6.13 0.000 intron (NM_015253, intron 2 of 8) intron (NM_015253, intron 2 of 8) 15662 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr11-7263 chr11 17786771 17786981 + 6.13 0.000 Intergenic Charlie15a|DNA|hAT-Charlie 50928 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr2-10750 chr2 36548841 36549051 + 6.13 0.000 3' UTR (NM_016441, exon 17 of 17) 3' UTR (NM_016441, exon 17 of 17) 49222 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr2-12294 chr2 46692310 46692520 + 6.13 0.000 Intergenic L2b|LINE|L2 -6545 NM_014011 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr11-10267 chr11 102761654 102761864 + 6.13 0.000 Intergenic L2c|LINE|L2 18869 NM_002425 4319 Hs.2258 NM_002425 ENSG00000166670 MMP10 SL-2|STMY2 matrix metallopeptidase 10 protein-coding chr9-7882 chr9 87732908 87733118 + 6.13 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 6894 NM_001257971 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr5-8063 chr5 94018172 94018382 + 6.13 0.000 intron (NR_028080, intron 3 of 8) MER21-int|LTR|ERVL 93386 NM_032042 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr2-14316 chr2 217650937 217651147 + 6.13 0.000 intron (NR_026597, intron 1 of 12) LTR50|LTR|ERVL 105551 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr1-16507 chr1 230059286 230059496 + 6.13 0.000 intron (NM_001291866, intron 1 of 15) intron (NM_001291866, intron 1 of 15) 1602 NM_001291866 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr3-8883 chr3 10823340 10823550 + 6.13 0.000 3' UTR (NM_001317406, exon 4 of 4) 3' UTR (NM_001317406, exon 4 of 4) 7217 NM_001317406 6538 Hs.655078 NM_014229 ENSG00000132164 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 member 11 protein-coding chr2-12802 chr2 88418064 88418274 + 6.13 0.000 Intergenic LTR40a|LTR|ERVL 34524 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr6-8428 chr6 151973563 151973773 + 6.13 0.000 intron (NM_001122741, intron 5 of 8) intron (NM_001122741, intron 5 of 8) 164561 NM_001328100 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr2-14395 chr2 219841627 219841837 + 6.13 0.000 Intergenic Intergenic 63157 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr4-7562 chr4 78510095 78510305 + 6.13 0.000 intron (NM_025074, intron 63 of 73) intron (NM_025074, intron 63 of 73) -41570 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr4-7699 chr4 88517501 88517711 + 6.13 0.000 Intergenic L1MB8|LINE|L1 6170 NM_032906 100996939 Hs.26136 NM_032906 ENSG00000145337 PYURF PREY PIGY upstream reading frame protein-coding chr2-12807 chr2 88650494 88650704 + 6.13 0.000 Intergenic AluJo|SINE|Alu 22770 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 EIF2AK3-DT - EIF2AK3 divergent transcript ncRNA chr5-6293 chr5 116842443 116842653 + 6.13 0.000 Intergenic Intergenic -80339 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr17-7177 chr17 79973658 79973868 + 6.13 0.000 intron (NM_019020, intron 3 of 11) AluJo|SINE|Alu -22910 NM_001271846 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr6-7892 chr6 108064018 108064228 + 6.13 0.000 intron (NM_014028, intron 2 of 5) intron (NM_014028, intron 2 of 5) 10618 NM_014028 28962 Hs.226780 NM_014028 ENSG00000081087 OSTM1 GIPN|GL|HSPC019|OPTB5 osteoclastogenesis associated transmembrane protein 1 protein-coding chr2-5629 chr2 189822505 189822715 + 6.13 0.000 intron (NR_110332, intron 6 of 12) intron (NR_110332, intron 6 of 12) 38160 NM_001321045 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr6-7787 chr6 97592059 97592269 + 6.13 0.000 intron (NR_110757, intron 1 of 4) LTR22B1|LTR|ERVK 286578 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr20-3712 chr20 16293648 16293858 + 6.13 0.000 intron (NM_024704, intron 25 of 25) HAL1|LINE|L1 279695 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr9-7942 chr9 90826574 90826784 + 6.13 0.000 promoter-TSS (NM_001174167) promoter-TSS (NM_001174167) -741 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chrX-4557 chrX 69549501 69549711 + 6.13 0.000 Intergenic Intergenic 44371 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr6-7301 chr6 43892374 43892584 + 6.13 0.000 intron (NR_024478, intron 1 of 1) intron (NR_024478, intron 1 of 1) 1451 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr14-1972 chr14 38600687 38600897 + 6.13 0.000 Intergenic L1PA7|LINE|L1 -281804 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chrX-2927 chrX 153086721 153086931 + 6.13 0.000 Intergenic Intergenic 14412 NM_032882 84968 Hs.533301 NM_032882 ENSG00000235961 PNMA6A MA6|PNMA6|PNMA6C PNMA family member 6A protein-coding chr22-3765 chr22 27991025 27991235 + 6.13 0.000 intron (NM_001145418, intron 19 of 22) intron (NM_001145418, intron 19 of 22) -70518 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr11-6283 chr11 60217675 60217885 + 6.13 0.000 intron (NM_001351235, intron 4 of 5) MER11C|LTR|ERVK -8624 NR_106758 102465250 NR_106758 ENSG00000275344 MIR6503 hsa-mir-6503 microRNA 6503 ncRNA chr8-6575 chr8 70058119 70058329 + 6.13 0.000 intron (NM_024504, intron 6 of 7) intron (NM_024504, intron 6 of 7) 13028 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr5-4994 chr5 81146023 81146233 + 6.13 0.000 intron (NM_006909, intron 17 of 26) intron (NM_006909, intron 17 of 26) -87192 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr19-7090 chr19 56095621 56095831 + 6.13 0.000 intron (NM_001002836, intron 2 of 2) HAL1M8|LINE|L1 25569 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr6-6920 chr6 14441074 14441284 + 6.13 0.000 Intergenic Intergenic -155725 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr7-8431 chr7 47071121 47071331 + 6.13 0.000 Intergenic L1M8|LINE|L1 -374104 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr18-3328 chr18 56467933 56468143 + 6.13 0.000 Intergenic Intergenic 170554 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr10-3631 chr10 97096363 97096573 + 6.13 0.000 intron (NM_003061, intron 4 of 36) intron (NM_003061, intron 4 of 36) -6288 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr4-7049 chr4 28713885 28714095 + 6.13 0.000 Intergenic LTR41|LTR|ERVL -105592 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chrX-4302 chrX 43703496 43703706 + 6.13 0.000 intron (NM_001270458, intron 4 of 15) intron (NM_001270458, intron 4 of 15) 48694 NM_001270458 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr5-5693 chr5 163151191 163151401 + 6.13 0.000 Intergenic L1PA7|LINE|L1 -286275 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr16-6013 chr16 8719107 8719317 + 6.13 0.000 intron (NM_000663, intron 1 of 15) L2b|LINE|L2 -1501 NM_001127448 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr14-4388 chr14 29007779 29007989 + 6.13 0.000 Intergenic Intergenic -222097 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr1-13679 chr1 12040625 12040835 + 6.13 0.000 Intergenic LTR64|LTR|ERV1 11572 NR_106787 102466982 NR_106787 ENSG00000276869 MIR6729 hsa-mir-6729 microRNA 6729 ncRNA chr15-3762 chr15 63749452 63749662 + 6.13 0.000 intron (NM_003922, intron 9 of 77) intron (NM_003922, intron 9 of 77) 84391 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding chr10-7930 chr10 51999251 51999461 + 6.13 0.000 intron (NM_001098512, intron 5 of 17) intron (NM_001098512, intron 5 of 17) -299761 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr9-8034 chr9 95254204 95254414 + 6.13 0.000 intron (NM_001243744, intron 1 of 13) L1PA7|LINE|L1 62945 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr10-9057 chr10 124665371 124665581 + 6.13 0.000 intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -38552 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr4-7833 chr4 101183726 101183936 + 6.13 0.000 intron (NM_001130691, intron 2 of 12) intron (NM_001130691, intron 2 of 12) 57041 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr3-9256 chr3 39236660 39236870 + 6.13 0.000 Intergenic Intergenic 43271 NM_001337 1524 Hs.78913 NM_001337 ENSG00000168329 CX3CR1 CCRL1|CMKBRL1|CMKDR1|GPR13|GPRV28|V28 C-X3-C motif chemokine receptor 1 protein-coding chr14-2420 chr14 63596582 63596792 + 6.13 0.000 TTS (NM_001008726) TTS (NM_001008726) 45184 NM_001008726 112840 Hs.655666 NM_080666 ENSG00000140006 WDR89 C14orf150|MSTP050 WD repeat domain 89 protein-coding chr12-5895 chr12 56912106 56912316 + 6.13 0.000 Intergenic AluJb|SINE|Alu 22197 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chr9-8736 chr9 132572946 132573156 + 6.13 0.000 3' UTR (NM_001282957, exon 6 of 6) 3' UTR (NM_001282957, exon 6 of 6) -9555 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr8-3506 chr8 109691990 109692200 + 6.13 0.000 promoter-TSS (NM_001099744) promoter-TSS (NM_001099744) -304 NM_001099744 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr11-4798 chr11 3181435 3181645 + 6.13 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR -16230 NM_145638 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr8-5091 chr8 48582267 48582477 + 6.13 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 30805 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr12-5318 chr12 113439694 113439904 + 6.13 0.000 Intergenic Intergenic 17409 NM_138432 113675 Hs.337594 NM_138432 ENSG00000139410 SDSL SDH 2|SDS-RS1|TDH|cSDH serine dehydratase like protein-coding chr7-6685 chr7 157289405 157289615 + 6.13 0.000 Intergenic Intergenic -47494 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr9-4322 chr9 126546129 126546339 + 6.13 0.000 Intergenic Intergenic -68209 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr2-12706 chr2 79088136 79088346 + 6.13 0.000 promoter-TSS (NM_006507) promoter-TSS (NM_006507) -248 NM_006507 5968 Hs.4158 NM_006507 ENSG00000172023 REG1B PSPS2|REGH|REGI-BETA|REGL regenerating family member 1 beta protein-coding chr12-5861 chr12 49650232 49650442 + 6.13 0.000 intron (NM_001367835, intron 17 of 26) L2c|LINE|L2 19793 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr1-11358 chr1 35144319 35144529 + 6.13 0.000 Intergenic HERV3-int|LTR|ERV1 48721 NR_136702 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr6-4605 chr6 44343577 44343787 + 6.13 0.000 intron (NM_145026, intron 2 of 8) intron (NM_145026, intron 2 of 8) 1022 NM_145026 221409 Hs.135283 NM_145026 ENSG00000249481 SPATS1 DDIP|SPATA8|SRSP1 spermatogenesis associated serine rich 1 protein-coding chr18-3219 chr18 47203384 47203594 + 6.13 0.000 Intergenic L2a|LINE|L2 -27125 NM_016097 51124 Hs.130917 NM_016097 ENSG00000134049 IER3IP1 HSPC039|MEDS|PRO2309 immediate early response 3 interacting protein 1 protein-coding chr11-8857 chr11 13235700 13235910 + 6.13 0.000 Intergenic Intergenic -40847 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr8-7346 chr8 134943019 134943229 + 6.13 0.000 Intergenic Intergenic 93189 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr12-4697 chr12 49032258 49032468 + 6.13 0.000 exon (NM_003482, exon 39 of 54) exon (NM_003482, exon 39 of 54) -13587 NM_001206710 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding chr9-2713 chr9 89009068 89009278 + 6.13 0.000 3' UTR (NM_016848, exon 12 of 12) 3' UTR (NM_016848, exon 12 of 12) 17705 NM_005226 1903 Hs.585118 NM_005226 ENSG00000213694 S1PR3 EDG-3|EDG3|LPB3|S1P3 sphingosine-1-phosphate receptor 3 protein-coding chr11-9430 chr11 60528336 60528546 + 6.13 0.000 intron (NM_001012417, intron 5 of 6) L2c|LINE|L2 13049 NM_001278320 503497 Hs.523704 NM_001012417 ENSG00000204979 MS4A13 - membrane spanning 4-domains A13 protein-coding chr16-5639 chr16 66231584 66231794 + 6.13 0.000 Intergenic Intergenic -135002 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr11-4442 chr11 95505931 95506141 + 6.13 0.000 Intergenic Intergenic -273561 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr20-2663 chr20 44757284 44757494 + 6.13 0.000 intron (NM_182970, intron 4 of 5) L2b|LINE|L2 -11162 NR_132377 106144538 Hs.255479 NR_132377 KCNK15-AS1 - KCNK15 and WISP2 antisense RNA 1 ncRNA chr2-12543 chr2 67701167 67701377 + 6.13 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger 124290 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr1-15648 chr1 164083648 164083858 + 6.13 0.000 Intergenic Intergenic -475607 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr16-4314 chr16 29258136 29258346 + 6.13 0.000 Intergenic Intergenic -44046 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr21-1736 chr21 33839438 33839648 + 6.13 0.000 intron (NM_001331010, intron 28 of 38) intron (NM_001331010, intron 28 of 38) 76261 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr3-8899 chr3 12302715 12302925 + 6.13 0.000 intron (NM_001354667, intron 1 of 6) intron (NM_001354667, intron 1 of 6) -9560 NM_001330615 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr2-14141 chr2 203232662 203232872 + 6.13 0.000 Intergenic Intergenic -5674 NM_177538 57404 Hs.446065 NM_020674 ENSG00000119004 CYP20A1 CYP-M cytochrome P450 family 20 subfamily A member 1 protein-coding chr7-8339 chr7 42967295 42967505 + 6.13 0.000 Intergenic MER65C|LTR|ERV1 35024 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr3-7939 chr3 155835909 155836119 + 6.13 0.000 intron (NM_001363883, intron 1 of 3) AluSc|SINE|Alu 18392 NM_001363883 9197 Hs.478031 NM_004733 ENSG00000169359 SLC33A1 ACATN|AT-1|AT1|CCHLND|SPG42 solute carrier family 33 member 1 protein-coding chr1-15140 chr1 103445653 103445863 + 6.13 0.000 intron (NM_001347930, intron 1 of 4) L1PA11|LINE|L1 79753 NM_001286997 101928436 Hs.558999 NM_001286997 LOC101928436 - uncharacterized LOC101928436 protein-coding chr7-8756 chr7 77930736 77930946 + 6.13 0.000 intron (NM_001366082, intron 10 of 11) L1ME3B|LINE|L1 90711 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr9-6722 chr9 7739651 7739861 + 6.13 0.000 Intergenic Intergenic 60022 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chrX-2423 chrX 77296367 77296577 + 6.13 0.000 Intergenic HERVE_a-int|LTR|ERV1 -150917 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr5-8184 chr5 105126621 105126831 + 6.13 0.000 Intergenic LTR16B|LTR|ERVL 27252 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr2-14665 chr2 236338089 236338299 + 6.13 0.000 intron (NR_073043, intron 18 of 19) intron (NR_073043, intron 18 of 19) -73849 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr16-5284 chr16 62664592 62664802 + 6.13 0.000 Intergenic AluJb|SINE|Alu -628259 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr1-15624 chr1 162364150 162364360 + 6.13 0.000 5' UTR (NM_001126060, exon 1 of 2) 5' UTR (NM_001126060, exon 1 of 2) 1272 NM_001126060 9722 Hs.731942 NM_014697 ENSG00000198929 NOS1AP 6330408P19Rik|CAPON nitric oxide synthase 1 adaptor protein protein-coding chr4-7731 chr4 90799777 90799987 + 6.13 0.000 intron (NM_001145065, intron 7 of 10) L1PA13|LINE|L1 564851 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr2-10620 chr2 10199733 10199943 + 6.13 0.000 intron (NR_161344, intron 3 of 3) PABL_A-int|LTR|ERV1 -7167 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr15-3292 chr15 77853810 77854020 + 6.13 0.000 Intergenic L2c|LINE|L2 -33015 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr5-6005 chr5 142248024 142248234 + 6.13 0.000 Intergenic MER47A|DNA|TcMar-Tigger 70193 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr17-5263 chr17 19311350 19311560 + 6.13 0.000 intron (NM_014964, intron 5 of 10) 7SLRNA|srpRNA|srpRNA -5194 NR_048576 100874018 Hs.621672 NR_048576 ENSG00000235397 EPN2-AS1 - EPN2 antisense RNA 1 ncRNA chr21-1466 chr21 34605796 34606006 + 6.13 0.000 intron (NM_004414, intron 1 of 3) AluSg|SINE|Alu 7942 NM_001285389 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr4-7181 chr4 40723016 40723226 + 6.13 0.000 Intergenic L2a|LINE|L2 -26834 NM_001330648 79730 Hs.479602 NM_024677 ENSG00000179299 NSUN7 - NOP2/Sun RNA methyltransferase family member 7 protein-coding chr2-12039 chr2 29800408 29800618 + 6.13 0.000 intron (NM_004304, intron 1 of 28) intron (NM_004304, intron 1 of 28) 121073 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr11-6916 chr11 108011300 108011510 + 6.13 0.000 intron (NM_003478, intron 1 of 18) Kanga2_a|DNA|TcMar-Tc2 2507 NM_003478 8065 Hs.440320 NM_003478 ENSG00000166266 CUL5 CUL-5|VACM-1|VACM1 cullin 5 protein-coding chrX-4365 chrX 49222739 49222949 + 6.13 0.000 intron (NM_001256790, intron 15 of 47) intron (NM_001256790, intron 15 of 47) 10496 NM_005183 778 Hs.632799 NM_005183 ENSG00000102001 CACNA1F AIED|COD3|COD4|CORDX|CORDX3|CSNB2|CSNB2A|CSNBX2|Cav1.4|Cav1.4alpha1|JM8|JMC8|OA2 calcium voltage-gated channel subunit alpha1 F protein-coding chr10-3912 chr10 71726138 71726348 + 6.13 0.000 intron (NM_022124, intron 29 of 67) intron (NM_022124, intron 29 of 67) -6465 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr11-8704 chr11 6136310 6136520 + 6.13 0.000 Intergenic L1PA6|LINE|L1 28731 NM_001005181 196335 Hs.632154 NM_001005181 ENSG00000180919 OR56B4 OR11-67 olfactory receptor family 56 subfamily B member 4 protein-coding chr9-8196 chr9 108041662 108041872 + 6.13 0.000 Intergenic Intergenic -551998 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr12-5975 chr12 90874746 90874956 + 6.13 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -43172 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr12-3325 chr12 87311303 87311513 + 6.13 0.000 Intergenic LTR78B|LTR|ERV1 -19331 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr8-3645 chr8 4988600 4988810 + 6.13 0.000 intron (NM_033225, intron 1 of 69) intron (NM_033225, intron 1 of 69) 6209 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr11-8110 chr11 44585878 44586088 + 6.13 0.000 intron (NM_001024844, intron 1 of 8) intron (NM_001024844, intron 1 of 8) 20320 NM_002231 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr13-2674 chr13 85767079 85767289 + 6.13 0.000 Intergenic Intergenic 32235 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chrX-4946 chrX 111747211 111747421 + 6.13 0.000 intron (NM_001099922, intron 24 of 26) L1MC1|LINE|L1 65659 NM_001257239 79868 Hs.443061 NM_018466 ENSG00000101901 ALG13 CDG1S|CXorf45|EIEE36|GLT28D1|MDS031|TDRD13|YGL047W ALG13 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr7-8986 chr7 100392088 100392298 + 6.13 0.000 intron (NM_013439, intron 3 of 6) AluSx4|SINE|Alu 18706 NM_178273 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr13-2338 chr13 34076407 34076617 + 6.13 0.000 Intergenic Intergenic 258363 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr17-8548 chr17 79694263 79694473 + 6.13 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 12881 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr6-6040 chr6 124751560 124751770 + 6.13 0.000 intron (NM_001040214, intron 4 of 6) intron (NM_001040214, intron 4 of 6) -210880 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr11-6537 chr11 69796608 69796818 + 6.13 0.000 Intergenic Intergenic -21372 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr8-5676 chr8 119821182 119821392 + 6.13 0.000 intron (NM_003184, intron 2 of 25) L2|LINE|L2 11554 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr17-6540 chr17 39352607 39352817 + 6.13 0.000 intron (NM_001370209, intron 1 of 13) AluSz|SINE|Alu 48914 NM_001184906 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr1-11960 chr1 74659173 74659383 + 6.13 0.000 intron (NM_001002912, intron 1 of 14) intron (NM_001002912, intron 1 of 14) 14514 NM_001002912 127254 Hs.531182 NM_001002912 ENSG00000178965 ERICH3 C1orf173 glutamate rich 3 protein-coding chr6-4345 chr6 17902734 17902944 + 6.13 0.000 intron (NM_001105567, intron 2 of 36) L2b|LINE|L2 84796 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr3-10433 chr3 131741106 131741316 + 6.13 0.000 intron (NM_130808, intron 2 of 15) L2a|LINE|L2 -238240 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr11-6088 chr11 34085703 34085913 + 6.13 0.000 intron (NM_005898, intron 9 of 18) AluSg7|SINE|Alu -19821 NM_024662 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr11-7875 chr11 122214617 122214827 + 6.13 0.000 intron (NR_137180, intron 2 of 4) L3b|LINE|CR1 -11613 NR_137182 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr14-4465 chr14 34459794 34460004 + 6.13 0.000 intron (NM_138288, intron 1 of 1) intron (NM_138288, intron 1 of 1) 2341 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr2-3999 chr2 95297368 95297578 + 6.13 0.000 intron (NM_013434, intron 1 of 8) intron (NM_013434, intron 1 of 8) 126 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr12-5527 chr12 132018162 132018372 + 6.13 0.000 exon (NM_015409, exon 21 of 53) exon (NM_015409, exon 21 of 53) -12957 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr7-5895 chr7 94698297 94698507 + 6.13 0.000 Intergenic Intergenic 42032 NM_001184962 23089 Hs.147492 NM_015068 ENSG00000242265 PEG10 EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1 paternally expressed 10 protein-coding chrX-4418 chrX 53625080 53625290 + 6.13 0.000 exon (NM_031407, exon 18 of 84) exon (NM_031407, exon 18 of 84) 61534 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr14-5093 chr14 86906689 86906899 + 6.13 0.000 intron (NR_038445, intron 1 of 4) intron (NR_038445, intron 1 of 4) 1016 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr2-12197 chr2 41786418 41786628 + 6.13 0.000 Intergenic MIRc|SINE|MIR -91032 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr2-14073 chr2 198359340 198359550 + 6.13 0.000 intron (NR_110267, intron 2 of 2) intron (NR_110267, intron 2 of 2) 15652 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr17-7701 chr17 31991396 31991606 + 6.13 0.000 intron (NM_001321207, intron 9 of 14) intron (NM_001321207, intron 9 of 14) -15882 NM_001321350 114659 Hs.514071 NM_052888 ENSG00000185158 LRRC37B LRRC37 leucine rich repeat containing 37B protein-coding chr20-2828 chr20 59575377 59575587 + 6.13 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -2027 NM_001199505 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr9-7558 chr9 35488327 35488537 + 6.13 0.000 Intergenic MER51A|LTR|ERV1 -1679 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr5-2870 chr5 82347694 82347904 + 6.13 0.000 Intergenic Intergenic 68337 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr11-9351 chr11 47020763 47020973 + 6.13 0.000 intron (NR_103472, intron 2 of 7) intron (NR_103472, intron 2 of 7) 84107 NM_001003677 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr3-7625 chr3 23194111 23194321 + 6.13 0.000 TTS (NR_136177) TTS (NR_136177) 8362 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr7-8072 chr7 24258469 24258679 + 6.13 0.000 Intergenic (AAAT)n|Simple_repeat|Simple_repeat -25616 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr5-5815 chr5 177190242 177190452 + 6.13 0.000 intron (NM_172349, intron 3 of 23) AluSz6|SINE|Alu 56118 NM_001365684 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr7-7398 chr7 71562449 71562659 + 6.13 0.000 intron (NM_022479, intron 5 of 10) MER1A|DNA|hAT-Charlie -254784 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr1-11058 chr1 225074894 225075104 + 6.13 0.000 intron (NM_001367479, intron 17 of 85) L1PA12|LINE|L1 145324 NM_001367481 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chrX-4014 chrX 16814692 16814902 + 6.13 0.000 intron (NM_001168683, intron 1 of 7) L1MB8|LINE|L1 28331 NM_018360 55787 Hs.555961 NM_018360 ENSG00000086712 TXLNG CXorf15|ELRG|FIAT|LSR5|TXLNGX taxilin gamma protein-coding chr2-14696 chr2 237796861 237797071 + 6.13 0.000 Intergenic Intergenic -1779 NM_001080504 375316 Hs.607265 NM_198852 ENSG00000177483 RBM44 - RNA binding motif protein 44 protein-coding chr4-8596 chr4 169880590 169880800 + 6.13 0.000 Intergenic LTR36|LTR|ERV1 95207 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chrX-1798 chrX 86507287 86507497 + 6.13 0.000 intron (NM_001139515, intron 2 of 11) intron (NM_001139515, intron 2 of 11) 244424 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr5-4941 chr5 75952418 75952628 + 6.13 0.000 Intergenic MSTB|LTR|ERVL-MaLR -130860 NM_001297716 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr1-9430 chr1 33272542 33272752 + 6.13 0.000 intron (NM_001370212, intron 1 of 7) intron (NM_001370212, intron 1 of 7) 2954 NM_001370212 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr14-3809 chr14 67729005 67729215 + 6.13 0.000 intron (NM_152443, intron 7 of 8) intron (NM_152443, intron 7 of 8) 27224 NM_152443 145226 Hs.415322 NM_152443 ENSG00000139988 RDH12 LCA13|RP53|SDR7C2 retinol dehydrogenase 12 protein-coding chr16-6362 chr16 50948994 50949204 + 6.13 0.000 intron (NR_039672, intron 2 of 6) intron (NR_039672, intron 2 of 6) -68659 NR_110913 101927334 Hs.555184 NR_110913 ENSG00000261637 LINC02127 - long intergenic non-protein coding RNA 2127 ncRNA chr11-7800 chr11 98846858 98847068 + 6.13 0.000 Intergenic Intergenic -173986 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr8-7338 chr8 134479227 134479437 + 6.13 0.000 intron (NM_001174158, intron 13 of 13) intron (NM_001174158, intron 13 of 13) -118739 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr17-8062 chr17 51318158 51318368 + 6.13 0.000 intron (NR_110751, intron 5 of 5) MER4A1|LTR|ERV1 16899 NR_110751 101927274 Hs.591168 NR_110751 ENSG00000249383 LINC02071 - long intergenic non-protein coding RNA 2071 ncRNA chr14-4928 chr14 74042587 74042797 + 6.13 0.000 intron (NM_025057, intron 5 of 11) AluJr|SINE|Alu 23343 NM_025057 80127 Hs.644621 NM_025057 ENSG00000119636 BBOF1 C14orf45|CCDC176 basal body orientation factor 1 protein-coding chr12-3752 chr12 45010720 45010930 + 6.13 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 40274 NM_001004329 440097 Hs.302764 NM_001004329 ENSG00000185610 DBX2 - developing brain homeobox 2 protein-coding chr6-5189 chr6 130857960 130858170 + 6.13 0.000 intron (NM_001350320, intron 15 of 15) intron (NM_001350320, intron 15 of 15) 30660 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr7-8189 chr7 31242167 31242377 + 6.13 0.000 Intergenic LTR16C|LTR|ERVL 98454 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr4-8674 chr4 179791668 179791878 + 6.13 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 1367376 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr8-6080 chr8 26614788 26614998 + 6.13 0.000 intron (NM_001244604, intron 3 of 13) intron (NM_001244604, intron 3 of 13) 36488 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr2-13121 chr2 115494959 115495169 + 6.13 0.000 intron (NM_001321912, intron 4 of 25) MER110|LTR|ERV1 151249 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr4-7031 chr4 26181986 26182196 + 6.13 0.000 Intergenic AluYk2|SINE|Alu -137619 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chrX-4421 chrX 53875188 53875398 + 6.13 0.000 Intergenic MER112|DNA|hAT-Charlie 167854 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr7-4955 chr7 141466797 141467007 + 6.13 0.000 intron (NM_001195278, intron 3 of 3) intron (NM_001195278, intron 3 of 3) -84508 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr4-6747 chr4 5569907 5570117 + 6.13 0.000 intron (NM_147127, intron 19 of 21) L2b|LINE|L2 44856 NR_126518 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr18-2147 chr18 56921711 56921921 + 6.13 0.000 intron (NM_015285, intron 21 of 27) intron (NM_015285, intron 21 of 27) 150303 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr3-7785 chr3 79247205 79247415 + 6.13 0.000 intron (NM_002941, intron 2 of 30) (ACT)n|Simple_repeat|Simple_repeat -164417 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr8-5343 chr8 15227259 15227469 + 6.13 0.000 intron (NM_139167, intron 1 of 7) intron (NM_139167, intron 1 of 7) 11067 NM_001322880 137868 Hs.545526 NM_139167 ENSG00000185053 SGCZ ZSG1 sarcoglycan zeta protein-coding chr6-4379 chr6 22098531 22098741 + 6.13 0.000 intron (NR_015410, intron 8 of 11) L2a|LINE|L2 48557 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr2-11104 chr2 129067173 129067383 + 6.13 0.000 Intergenic Intergenic 202678 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chrX-4496 chrX 64946344 64946554 + 6.13 0.000 intron (NM_001178032, intron 1 of 4) L1P3|LINE|L1 30001 NR_045044 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr15-3696 chr15 42033392 42033602 + 6.13 0.000 intron (NM_001206670, intron 1 of 19) intron (NM_001206670, intron 1 of 19) 17206 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chr19-6464 chr19 17089456 17089666 + 6.13 0.000 intron (NM_001130065, intron 1 of 39) intron (NM_001130065, intron 1 of 39) -2674 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chr3-8684 chr3 183417756 183417966 + 6.13 0.000 intron (NM_015078, intron 1 of 29) THE1D|LTR|ERVL-MaLR 10408 NM_015078 23101 Hs.208267 NM_015078 ENSG00000053524 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding chr14-2839 chr14 27329779 27329989 + 6.13 0.000 intron (NR_148991, intron 2 of 2) AluJr|SINE|Alu -282704 NR_039992 100505967 Hs.668484 NR_039992 ENSG00000258548 LINC00645 - long intergenic non-protein coding RNA 645 ncRNA chr12-6526 chr12 110074645 110074855 + 6.13 0.000 Intergenic LTR65|LTR|ERV1 -1111 NR_148514 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr11-4196 chr11 61863229 61863439 + 6.13 0.000 exon (NM_004265, exon 9 of 12) exon (NM_004265, exon 9 of 12) 14944 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr11-7428 chr11 113115724 113115934 + 6.13 0.000 intron (NM_181351, intron 1 of 18) intron (NM_181351, intron 1 of 18) -152369 NR_120563 101928847 Hs.711235 NR_120563 ENSG00000247416 LOC101928847 - uncharacterized LOC101928847 ncRNA chr5-7734 chr5 59532844 59533054 + 6.13 0.000 intron (NM_001349242, intron 1 of 16) intron (NM_001349242, intron 1 of 16) 53549 NM_001349242 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr14-4726 chr14 60258953 60259163 + 6.13 0.000 intron (NM_177951, intron 2 of 3) intron (NM_177951, intron 2 of 3) 9837 NM_021003 5494 Hs.130036 NM_021003 ENSG00000100614 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent 1A protein-coding chr1-8578 chr1 173976816 173977026 + 6.13 0.000 intron (NM_001300852, intron 6 of 18) AluY|SINE|Alu 16151 NM_001300851 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding chr12-5922 chr12 68751098 68751308 + 6.13 0.000 intron (NR_149144, intron 2 of 4) intron (NR_149144, intron 2 of 4) 5027 NM_001354998 55508 Hs.506011 NM_018656 ENSG00000175782 SLC35E3 BLOV1 solute carrier family 35 member E3 protein-coding chr7-6331 chr7 144791704 144791914 + 6.13 0.000 intron (NM_001350887, intron 1 of 6) HERVL40-int|LTR|ERVL 44131 NR_146935 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr8-6935 chr8 103848284 103848494 + 6.13 0.000 intron (NR_145711, intron 1 of 21) ERV3-16A3_I-int|LTR|ERVL 29169 NM_001282881 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr3-10252 chr3 123459635 123459845 + 6.13 0.000 Intergenic Intergenic -11195 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr3-8980 chr3 16576254 16576464 + 6.13 0.000 Intergenic L1MA4|LINE|L1 28431 NM_001190811 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr20-4277 chr20 49823931 49824141 + 6.13 0.000 intron (NR_048539, intron 3 of 13) intron (NR_048539, intron 3 of 13) 11208 NR_048538 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr4-3322 chr4 736543 736753 + 6.13 0.000 intron (NM_001317836, intron 6 of 11) CpG 30816 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr2-11005 chr2 102321797 102322007 + 6.13 0.000 intron (NM_001282408, intron 1 of 6) intron (NM_001282408, intron 1 of 6) 10339 NM_016232 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr5-4324 chr5 155895673 155895883 + 6.13 0.000 Intergenic Intergenic -430979 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr1-12305 chr1 241094079 241094289 + 6.13 0.000 intron (NM_001350116, intron 3 of 16) intron (NM_001350116, intron 3 of 16) -38088 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr2-12557 chr2 68685879 68686089 + 6.13 0.000 Intergenic Intergenic 42396 NM_138964 10887 Hs.683430 NM_138964 ENSG00000169618 PROKR1 GPR73|GPR73a|PK-R1|PKR1|ZAQ prokineticin receptor 1 protein-coding chr3-8532 chr3 142154575 142154785 + 6.13 0.000 Intergenic L1MC4a|LINE|L1 -5136 NM_001178138 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr3-11060 chr3 183968432 183968642 + 6.13 0.000 intron (NM_001320032, intron 11 of 29) intron (NM_001320032, intron 11 of 29) -37801 NR_046570 100873982 Hs.570696 NR_046570 ENSG00000223882 ABCC5-AS1 - ABCC5 antisense RNA 1 ncRNA chr2-12350 chr2 50380247 50380457 + 6.13 0.000 intron (NM_001330093, intron 17 of 22) intron (NM_001330093, intron 17 of 22) -32596 NM_138735 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr2-11106 chr2 129615779 129615989 + 6.13 0.000 Intergenic L1MA6|LINE|L1 261607 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr6-5843 chr6 35207615 35207825 + 6.13 0.000 Intergenic Intergenic -6236 NM_152753 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding chr9-3351 chr9 111056425 111056635 + 6.13 0.000 Intergenic Intergenic -17532 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chrX-3864 chrX 2984472 2984682 + 6.13 0.000 Intergenic Intergenic -16332 NM_001369080 415 Hs.386975 NM_000047 ENSG00000157399 ARSE ASE|CDPX|CDPX1|CDPXR arylsulfatase E protein-coding chr8-7114 chr8 119246045 119246255 + 6.13 0.000 TTS (NM_052886) TTS (NM_052886) 707 NR_149113 105375726 Hs.666095 NR_149111 MAL2-AS1 - MAL2 antisense RNA 1 ncRNA chr5-5193 chr5 112396564 112396774 + 6.13 0.000 intron (NM_001347887, intron 1 of 23) MLT1F1|LTR|ERVL-MaLR 22608 NM_022140 64097 Hs.584954 NM_022140 ENSG00000129595 EPB41L4A EPB41L4|NBL4 erythrocyte membrane protein band 4.1 like 4A protein-coding chr3-2452 chr3 53773699 53773909 + 6.13 0.000 intron (NM_001128840, intron 33 of 47) intron (NM_001128840, intron 33 of 47) 72615 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr8-7087 chr8 117988323 117988533 + 6.13 0.000 intron (NM_000127, intron 1 of 10) MER5A|DNA|hAT-Charlie -67515 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr1-11132 chr1 234145021 234145231 + 6.13 0.000 intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -69085 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr12-7282 chr12 52750095 52750305 + 6.13 0.000 Intergenic Intergenic 27145 NM_015848 51350 Hs.654392 NM_015848 ENSG00000185069 KRT76 HUMCYT2A|KRT2B|KRT2P keratin 76 protein-coding chr1-12895 chr1 111607876 111608086 + 6.13 0.000 intron (NR_034126, intron 1 of 4) SVA_D|Retroposon|SVA 337 NR_034126 100129269 Hs.689728 NR_034126 LINC01160 - long intergenic non-protein coding RNA 1160 ncRNA chr22-4159 chr22 45072050 45072260 + 6.13 0.000 Intergenic Intergenic -62150 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr5-8345 chr5 119528170 119528380 + 6.13 0.000 intron (NM_001199291, intron 21 of 24) intron (NM_001199291, intron 21 of 24) 75778 NM_001199291 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr4-5429 chr4 15150587 15150797 + 6.13 0.000 intron (NR_125911, intron 2 of 5) L2c|LINE|L2 148211 NM_001177384 132864 Hs.656937 NM_182485 ENSG00000137449 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding chr8-6051 chr8 24832247 24832457 + 6.13 0.000 Intergenic THE1D|LTR|ERVL-MaLR -81409 NM_005382 4741 Hs.458657 NM_005382 ENSG00000104722 NEFM NEF3|NF-M|NFM neurofilament medium protein-coding chr5-7186 chr5 6254244 6254454 + 6.13 0.000 Intergenic Intergenic 82943 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr11-10091 chr11 85899252 85899462 + 6.13 0.000 intron (NM_001286159, intron 7 of 10) LTR81A|LTR|Gypsy 44256 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr2-9549 chr2 239625186 239625396 + 6.13 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -137569 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr14-4339 chr14 23054121 23054331 + 6.13 0.000 exon (NM_022478, exon 6 of 14) exon (NM_022478, exon 6 of 14) 3312 NM_022478 64403 Hs.155912 NM_022478 ENSG00000139880 CDH24 CDH11L cadherin 24 protein-coding chr2-12942 chr2 102264098 102264308 + 6.13 0.000 Intergenic Intergenic -47299 NM_001282408 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr12-4038 chr12 48805458 48805668 + 6.13 0.000 Intergenic Intergenic -8917 NM_001206917 784 Hs.250712 NM_000725 ENSG00000167535 CACNB3 CAB3|CACNLB3 calcium voltage-gated channel auxiliary subunit beta 3 protein-coding chr9-8230 chr9 110022216 110022426 + 6.13 0.000 intron (NM_147150, intron 7 of 9) FLAM_A|SINE|Alu -26277 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chrX-2886 chrX 148626864 148627074 + 6.13 0.000 intron (NM_001169124, intron 1 of 19) AluJr|SINE|Alu -92122 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr3-9752 chr3 69322998 69323208 + 6.13 0.000 intron (NM_015123, intron 1 of 22) GA-rich|Low_complexity|Low_complexity 62985 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr8-6038 chr8 23756693 23756903 + 6.13 0.000 Intergenic Intergenic -50200 NM_001136271 137814 Hs.532654 NM_001136271 ENSG00000180053 NKX2-6 CSX2|CTHM|NKX2F|NKX4-2 NK2 homeobox 6 protein-coding chr18-1727 chr18 4984365 4984575 + 6.13 0.000 Intergenic L1PA10|LINE|L1 -96712 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA chr5-9048 chr5 169921771 169921981 + 6.13 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 58619 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr8-3582 chr8 134127412 134127622 + 6.13 0.000 Intergenic Intergenic 241021 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr20-4072 chr20 38595514 38595724 + 6.13 0.000 Intergenic HERVH-int|LTR|ERV1 -6190 NM_001164431 343578 NM_001164431 ENSG00000124143 ARHGAP40 C20orf95|dJ1100H13.4 Rho GTPase activating protein 40 protein-coding chr18-2191 chr18 60749010 60749220 + 6.13 0.000 Intergenic AluSg|SINE|Alu -376340 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr17-7004 chr17 51747599 51747809 + 6.13 0.000 exon (NM_001082534, exon 5 of 10) exon (NM_001082534, exon 5 of 10) 312277 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr3-11062 chr3 184119303 184119513 + 6.13 0.000 Intergenic AluSx|SINE|Alu -14230 NR_133658 106478970 Hs.581159 NR_133658 ENSG00000238020 HTR3E-AS1 - HTR3E antisense RNA 1 ncRNA chr7-6291 chr7 139108190 139108400 + 6.13 0.000 intron (NM_020119, intron 1 of 12) intron (NM_020119, intron 1 of 12) 1425 NM_001363491 56829 Hs.133512 NM_020119 ENSG00000105939 ZC3HAV1 ARTD13|FLB6421|PARP13|ZAP|ZC3H2|ZC3HDC2 zinc finger CCCH-type containing, antiviral 1 protein-coding chr1-16673 chr1 244010427 244010637 + 6.13 0.000 intron (NR_033883, intron 5 of 11) intron (NR_033883, intron 5 of 11) -38407 NM_001278196 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr4-5520 chr4 98527684 98527894 + 6.13 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 130822 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr9-5925 chr9 133514658 133514868 + 6.13 0.000 exon (NM_001080483, exon 5 of 5) exon (NM_001080483, exon 5 of 5) 10196 NM_001080483 389827 NM_001080483 ENSG00000187616 MYMK MYOMAKER|TMEM226|TMEM8C myomaker, myoblast fusion factor protein-coding chr20-2822 chr20 59290528 59290738 + 6.13 0.000 Intergenic Intergenic -9978 NM_207033 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding chr2-5945 chr2 35829572 35829782 + 6.13 0.000 Intergenic Intergenic 358272 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr15-5218 chr15 96392276 96392486 + 6.13 0.000 Intergenic Intergenic 58616 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr13-2649 chr13 80131322 80131532 + 6.13 0.000 Intergenic Intergenic 120350 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr6-4527 chr6 38998041 38998251 + 6.13 0.000 intron (NM_001371, intron 87 of 91) intron (NM_001371, intron 87 of 91) -45039 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr18-1086 chr18 48178015 48178225 + 6.13 0.000 intron (NM_001371285, intron 2 of 5) LTR33|LTR|ERVL 15806 NM_001371288 chr18-3183 chr18 44870955 44871165 + 6.13 0.000 intron (NM_015559, intron 3 of 5) intron (NM_015559, intron 3 of 5) 99106 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr13-4131 chr13 82412672 82412882 + 6.13 0.000 Intergenic Intergenic -1185794 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr1-9603 chr1 45089400 45089610 + 6.13 0.000 intron (NM_020883, intron 1 of 13) MIRb|SINE|MIR 77251 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr17-3483 chr17 45073711 45073921 + 6.13 0.000 intron (NM_021079, intron 1 of 11) MIR3|SINE|MIR 12499 NM_021079 4836 Hs.532790 NM_021079 ENSG00000136448 NMT1 NMT N-myristoyltransferase 1 protein-coding chr8-5628 chr8 101889107 101889317 + 6.13 0.000 intron (NM_001040624, intron 4 of 7) intron (NM_001040624, intron 4 of 7) -95220 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr12-5436 chr12 122866624 122866834 + 6.13 0.000 3' UTR (NM_024667, exon 4 of 4) 3' UTR (NM_024667, exon 4 of 4) 29395 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr1-14820 chr1 74073473 74073683 + 6.13 0.000 intron (NM_001105659, intron 6 of 7) intron (NM_001105659, intron 6 of 7) 124598 NM_001322315 127255 Hs.644625 NM_145258 ENSG00000162620 LRRIQ3 LRRC44 leucine rich repeats and IQ motif containing 3 protein-coding chr3-9479 chr3 50253064 50253274 + 6.13 0.000 exon (NM_001166425, exon 4 of 9) exon (NM_001166425, exon 4 of 9) 6259 NM_001166425 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr19-4297 chr19 872756 872966 + 6.13 0.000 intron (NM_005481, intron 11 of 15) intron (NM_005481, intron 11 of 15) 13197 NM_001928 1675 Hs.155597 NM_001928 ENSG00000197766 CFD ADIPSIN|ADN|DF|PFD complement factor D protein-coding chr8-5990 chr8 22200070 22200280 + 6.13 0.000 intron (NR_033403, intron 15 of 19) intron (NR_033403, intron 15 of 19) 31924 NM_014759 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr10-2650 chr10 92479479 92479689 + 6.13 0.000 intron (NM_001322796, intron 14 of 24) intron (NM_001322796, intron 14 of 24) 18177 NM_001165946 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr17-3735 chr17 27677333 27677543 + 6.13 0.000 Intergenic Intergenic 46250 NM_002308 3965 Hs.81337 NM_002308 ENSG00000168961 LGALS9 HUAT|LGALS9A galectin 9 protein-coding chrX-5428 chrX 153611630 153611840 + 6.13 0.000 Intergenic Intergenic 12395 NR_131982 105373383 Hs.547831 NR_131982 ENSG00000260081 LOC105373383 - uncharacterized LOC105373383 ncRNA chr11-7197 chr11 131694768 131694978 + 6.13 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -31317 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr3-9234 chr3 38281966 38282176 + 6.13 0.000 promoter-TSS (NM_001320033) promoter-TSS (NM_001320033) -223 NM_001320033 9389 Hs.165559 NM_004803 ENSG00000144671 SLC22A14 OCTL2|OCTL4|ORCTL4 solute carrier family 22 member 14 protein-coding chr11-9369 chr11 48061331 48061541 + 6.13 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) -35346 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr4-5846 chr4 108627662 108627872 + 6.13 0.000 intron (NM_033625, intron 5 of 5) AluSx|SINE|Alu 7138 NM_001319234 6164 Hs.438227 NM_000995 ENSG00000109475 RPL34 L34 ribosomal protein L34 protein-coding chr6-5947 chr6 76010175 76010385 + 6.13 0.000 intron (NM_001563, intron 8 of 16) intron (NM_001563, intron 8 of 16) 62382 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr6-6000 chr6 101595540 101595750 + 6.13 0.000 intron (NM_001166247, intron 1 of 16) (TA)n|Simple_repeat|Simple_repeat 196660 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr9-4079 chr9 125885716 125885926 + 6.13 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 137638 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr8-6632 chr8 77523405 77523615 + 6.13 0.000 Intergenic Intergenic 72813 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr10-7530 chr10 14521448 14521658 + 6.13 0.000 intron (NM_001282699, intron 3 of 3) intron (NM_001282699, intron 3 of 3) 11161 NM_001320741 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr1-13499 chr1 4461838 4462048 + 6.13 0.000 Intergenic Intergenic 49892 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr18-2405 chr18 7333787 7333997 + 6.13 0.000 Intergenic Intergenic 102788 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr13-1856 chr13 113261626 113261836 + 6.13 0.000 intron (NM_001008895, intron 19 of 19) intron (NM_001008895, intron 19 of 19) -1189 NR_107042 102465874 NR_107042 ENSG00000277942 MIR8075 hsa-mir-8075 microRNA 8075 ncRNA chr4-7428 chr4 66723223 66723433 + 6.13 0.000 Intergenic Intergenic 446504 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr22-2358 chr22 43689276 43689486 + 6.13 0.000 intron (NM_198856, intron 8 of 29) LTR78|LTR|ERV1 122924 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr16-6093 chr16 12171576 12171786 + 6.13 0.000 intron (NM_032167, intron 13 of 20) intron (NM_032167, intron 13 of 20) 194947 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr4-6629 chr4 1332066 1332276 + 6.13 0.000 intron (NM_001297432, intron 5 of 8) intron (NM_001297432, intron 5 of 8) -15037 NM_020894 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chr2-4713 chr2 232448175 232448385 + 6.13 0.000 Intergenic Intergenic -7873 NM_001631 248 Hs.37009 NM_001631 ENSG00000163295 ALPI IAP alkaline phosphatase, intestinal protein-coding chr16-6162 chr16 23842391 23842601 + 6.13 0.000 intron (NM_002738, intron 2 of 16) intron (NM_002738, intron 2 of 16) 6513 NM_002738 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr5-4591 chr5 28571283 28571493 + 6.13 0.000 Intergenic Intergenic -283723 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr5-8664 chr5 140382610 140382820 + 6.13 0.000 Intergenic MER5A|DNA|hAT-Charlie -19099 NM_020690 404734 Hs.594084 NM_020690 ENSG00000254996 ANKHD1-EIF4EBP3 MASK-BP3|MASK-BP3ARF ANKHD1-EIF4EBP3 readthrough protein-coding chr9-5210 chr9 74120450 74120660 + 6.13 0.000 Intergenic MamRTE1|LINE|RTE-BovB -250976 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr3-4169 chr3 126524192 126524402 + 6.13 0.000 5' UTR (NM_152889, exon 1 of 3) 5' UTR (NM_152889, exon 1 of 3) 142 NM_152889 166012 Hs.292375 NM_152889 ENSG00000180767 CHST13 C4ST3 carbohydrate sulfotransferase 13 protein-coding chrX-2659 chrX 114586115 114586325 + 6.13 0.000 intron (NM_001256760, intron 1 of 6) intron (NM_001256760, intron 1 of 6) 2142 NM_000868 3358 Hs.149037 NM_000868 ENSG00000147246 HTR2C 5-HT1C|5-HT2C|5-HTR2C|5HTR2C|HTR1C 5-hydroxytryptamine receptor 2C protein-coding chr10-8022 chr10 63046805 63047015 + 6.13 0.000 Intergenic AluSq|SINE|Alu -86337 NM_001282405 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr2-5657 chr2 197459379 197459589 + 6.13 0.000 intron (NM_001320820, intron 1 of 4) intron (NM_001320820, intron 1 of 4) 5720 NM_001320820 80219 Hs.606592 NM_025147 ENSG00000115520 COQ10B - coenzyme Q10B protein-coding chr11-8678 chr11 4203962 4204172 + 6.13 0.000 Intergenic Intergenic 16915 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LINC02749 - long intergenic non-protein coding RNA 2749 ncRNA chrX-3207 chrX 48788112 48788322 + 6.13 0.000 intron (NM_002049, intron 1 of 5) intron (NM_002049, intron 1 of 5) 1643 NM_002049 2623 Hs.765 NM_002049 ENSG00000102145 GATA1 ERYF1|GATA-1|GF-1|GF1|NF-E1|NFE1|XLANP|XLTDA|XLTT GATA binding protein 1 protein-coding chr1-11950 chr1 68782186 68782396 + 6.13 0.000 Intergenic L2|LINE|L2 -273607 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr12-8214 chr12 123625225 123625435 + 6.13 0.000 intron (NM_001414, intron 6 of 8) AluYh3|SINE|Alu 8356 NM_001414 1967 Hs.741273 NM_001414 ENSG00000111361 EIF2B1 EIF2B|EIF2BA eukaryotic translation initiation factor 2B subunit alpha protein-coding chrX-5335 chrX 147200740 147200950 + 6.13 0.000 Intergenic L1PA6|LINE|L1 -1718 NR_031708 100313822 NR_031708 ENSG00000207871 MIR513B MIRN513B microRNA 513b ncRNA chr2-13154 chr2 119435662 119435872 + 6.13 0.000 intron (NM_183240, intron 1 of 1) L2b|LINE|L2 3913 NM_183240 140738 Hs.26216 NM_183240 ENSG00000171227 TMEM37 PR|PR1 transmembrane protein 37 protein-coding chr5-6727 chr5 73442244 73442454 + 6.13 0.000 Intergenic Intergenic 6428 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr12-5712 chr12 114225249 114225459 + 6.13 0.000 Intergenic Intergenic 16416 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chr1-12010 chr1 96118791 96119001 + 6.13 0.000 Intergenic L1MEd|LINE|L1 126828 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr1-16204 chr1 208008372 208008582 + 6.13 0.000 Intergenic L2c|LINE|L2 -97352 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr19-5410 chr19 15469891 15470101 + 6.13 0.000 intron (NM_001363546, intron 3 of 3) CpG -5452 NM_001348028 64926 Hs.136979 NM_022904 ENSG00000105122 RASAL3 - RAS protein activator like 3 protein-coding KI270728.1-4 KI270728.1 1559088 1559298 + 6.13 0.000 NA NA NA NA chr10-8261 chr10 75643267 75643477 + 6.13 0.000 intron (NM_001305581, intron 2 of 6) MIRb|SINE|MIR -4137 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr5-4431 chr5 1665232 1665442 + 6.13 0.000 Intergenic Intergenic -31332 NR_003713 728613 Hs.720393 NR_003713 LOC728613 - programmed cell death 6 pseudogene pseudo chr4-6088 chr4 9768479 9768689 + 6.13 0.000 Intergenic L2b|LINE|L2 -13050 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr6-7939 chr6 110969562 110969772 + 6.13 0.000 Intergenic AluY|SINE|Alu 10961 NM_138408 112495 Hs.418520 NM_138408 ENSG00000155115 GTF3C6 C6orf51|TFIIIC35|bA397G5.3 general transcription factor IIIC subunit 6 protein-coding chr15-3405 chr15 89464366 89464576 + 6.13 0.000 Intergenic HERV4_I-int|LTR|ERV1 32112 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr19-5500 chr19 45136764 45136974 + 6.13 0.000 intron (NM_019121, intron 1 of 12) MIR3|SINE|MIR 23281 NM_198478 284353 Hs.299256 NM_198478 NKPD1 - NTPase KAP family P-loop domain containing 1 protein-coding chr12-7364 chr12 56581889 56582099 + 6.13 0.000 intron (NM_002898, intron 8 of 13) intron (NM_002898, intron 8 of 13) 48332 NM_001300905 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr8-5026 chr8 17112828 17113038 + 6.13 0.000 intron (NR_146233, intron 12 of 15) intron (NR_146233, intron 12 of 15) -43549 NM_016353 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr10-6555 chr10 73313540 73313750 + 6.13 0.000 intron (NM_001367801, intron 10 of 27) AluSz|SINE|Alu 45109 NM_001350934 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding chr5-5068 chr5 94773752 94773962 + 6.13 0.000 intron (NM_001297777, intron 16 of 19) THE1B|LTR|ERVL-MaLR 155188 NM_032290 84250 Hs.657315 NM_032290 ENSG00000133302 SLF1 ANKRD32|BRCTD1|BRCTx SMC5-SMC6 complex localization factor 1 protein-coding chr3-4344 chr3 181335509 181335719 + 6.13 0.000 intron (NR_075091, intron 3 of 7) intron (NR_075091, intron 3 of 7) 103877 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr16-6016 chr16 8752074 8752284 + 6.13 0.000 intron (NM_020686, intron 5 of 15) intron (NM_020686, intron 5 of 15) 31466 NM_001127448 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr13-2757 chr13 98599772 98599982 + 6.13 0.000 Intergenic Intergenic 22622 NR_046542 100874069 Hs.594160 NR_046542 STK24-AS1 - STK24 antisense RNA 1 ncRNA chr4-3484 chr4 133921996 133922206 + 6.13 0.000 Intergenic ERVL-E-int|LTR|ERVL 279688 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr17-5894 chr17 72642787 72642997 + 6.13 0.000 Intergenic ERVL-B4-int|LTR|ERVL -2420 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr5-5762 chr5 172939797 172940007 + 6.13 0.000 intron (NM_001031711, intron 9 of 9) intron (NM_001031711, intron 9 of 9) -18827 NM_001317981 51121 Hs.546390 NM_016093 ENSG00000037241 RPL26L1 RPL26P1 ribosomal protein L26 like 1 protein-coding chr5-8441 chr5 128890567 128890777 + 6.13 0.000 Intergenic L1MA2|LINE|L1 -74455 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr2-12639 chr2 73569297 73569507 + 6.13 0.000 intron (NM_015120, intron 15 of 22) intron (NM_015120, intron 15 of 22) 73020 NM_003960 9027 Hs.14637 NM_003960 ENSG00000144035 NAT8 ATase2|CCNAT|CML1|GLA|Hcml1|TSC501|TSC510 N-acetyltransferase 8 (putative) protein-coding chr21-1630 chr21 21362170 21362380 + 6.13 0.000 intron (NM_001352592, intron 9 of 18) L2|LINE|L2 215113 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr7-5833 chr7 85636239 85636449 + 6.13 0.000 Intergenic Intergenic 215222 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chrX-2273 chrX 49233703 49233913 + 6.13 0.000 promoter-TSS (NM_005183) promoter-TSS (NM_005183) -468 NM_001256789 778 Hs.632799 NM_005183 ENSG00000102001 CACNA1F AIED|COD3|COD4|CORDX|CORDX3|CSNB2|CSNB2A|CSNBX2|Cav1.4|Cav1.4alpha1|JM8|JMC8|OA2 calcium voltage-gated channel subunit alpha1 F protein-coding chr10-5494 chr10 80525041 80525251 + 6.13 0.000 3' UTR (NM_001351267, exon 11 of 11) 3' UTR (NM_001351267, exon 11 of 11) 10796 NR_120661 101929574 Hs.593663 NR_120661 ENSG00000226659 LOC101929574 - uncharacterized LOC101929574 ncRNA chr11-6606 chr11 73344870 73345080 + 6.13 0.000 intron (NM_014786, intron 1 of 20) MIRb|SINE|MIR -31424 NM_152222 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr2-9921 chr2 236164267 236164477 + 6.13 0.000 TTS (NM_001485) TTS (NM_001485) 4014 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr5-4698 chr5 39862038 39862248 + 6.13 0.000 Intergenic Intergenic -190148 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr11-8022 chr11 15307776 15307986 + 6.13 0.000 Intergenic Intergenic 158779 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr2-12990 chr2 105930708 105930918 + 6.13 0.000 Intergenic Intergenic 78966 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr13-3444 chr13 106437534 106437744 + 6.13 0.000 Intergenic Intergenic 61075 NR_163477 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chrX-3904 chrX 8660044 8660254 + 6.13 0.000 intron (NM_000216, intron 2 of 13) intron (NM_000216, intron 2 of 13) 71988 NM_000216 3730 Hs.521869 NM_000216 ENSG00000011201 ANOS1 ADMLX|HH1|HHA|KAL|KAL1|KALIG-1|KMS|WFDC19 anosmin 1 protein-coding chr6-5869 chr6 39002343 39002553 + 6.13 0.000 intron (NM_001371, intron 87 of 91) intron (NM_001371, intron 87 of 91) -46333 NR_136563 2740 Hs.351883 NM_002062 ENSG00000112164 GLP1R GLP-1|GLP-1-R|GLP-1R glucagon like peptide 1 receptor protein-coding chr2-9978 chr2 10837775 10837985 + 6.13 0.000 promoter-TSS (NM_001282705) promoter-TSS (NM_001282705) -168 NM_001282705 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr12-6289 chr12 49802993 49803203 + 6.13 0.000 exon (NM_001368048, exon 5 of 14) exon (NM_001368048, exon 5 of 14) 25315 NM_001368048 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L Cep169|FP1193|KIAA1602 NCK associated protein 5 like protein-coding chr8-6560 chr8 69643272 69643482 + 6.13 0.000 intron (NR_132437, intron 16 of 16) intron (NR_132437, intron 16 of 16) 50477 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr2-10115 chr2 62683544 62683754 + 6.13 0.000 intron (NM_001142615, intron 1 of 22) AluY|SINE|Alu 9771 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr22-2622 chr22 32744491 32744701 + 6.13 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -56220 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr15-3933 chr15 38893895 38894105 + 6.13 0.000 Intergenic Intergenic 197402 NR_160786 chr12-7496 chr12 67370645 67370855 + 6.13 0.000 Intergenic Intergenic 71809 NR_146500 102724433 NR_146500 ENSG00000256172 LINC02420 - long intergenic non-protein coding RNA 2420 ncRNA chr16-4492 chr16 57390717 57390927 + 6.13 0.000 Intergenic MSTC|LTR|ERVL-MaLR -13945 NM_002987 6361 Hs.546294 NM_002987 ENSG00000102970 CCL17 A-152E5.3|ABCD-2|SCYA17|TARC C-C motif chemokine ligand 17 protein-coding chr20-2064 chr20 11117814 11118024 + 6.13 0.000 Intergenic Intergenic 91375 NR_146878 728434 Hs.570365 NR_146878 ENSG00000125899 C20orf187 - chromosome 20 open reading frame 187 (putative) ncRNA chr4-6097 chr4 10963431 10963641 + 6.13 0.000 Intergenic Intergenic -278768 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr8-4496 chr8 119363413 119363623 + 6.13 0.000 Intergenic Intergenic 38347 NR_106755 102466162 NR_106755 ENSG00000276479 MIR548AZ hsa-mir-548az microRNA 548az ncRNA chrX-4635 chrX 78233349 78233559 + 6.13 0.000 Intergenic L1PA7|LINE|L1 -93804 NM_015975 51616 Hs.592248 NM_015975 ENSG00000187325 TAF9B DN-7|DN7|TAF9L|TAFII31L|TFIID-31 TATA-box binding protein associated factor 9b protein-coding chrX-4661 chrX 81052968 81053178 + 6.13 0.000 Intergenic Intergenic 148840 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr10-7608 chr10 21202474 21202684 + 6.13 0.000 Intergenic AluY|SINE|Alu 28277 NR_046284 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA chr2-12273 chr2 45905054 45905264 + 6.13 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 253484 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr18-2323 chr18 4079655 4079865 + 6.13 0.000 intron (NM_001242761, intron 2 of 11) intron (NM_001242761, intron 2 of 11) 117407 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA chr7-7853 chr7 5267498 5267708 + 6.13 0.000 Intergenic Intergenic -15340 NM_153247 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chrX-5287 chrX 141344326 141344536 + 6.13 0.000 Intergenic L2|LINE|L2 -101914 NM_022661 64663 Hs.375036 NM_022661 ENSG00000198573 SPANXC CT11.3|CTp11|SPANX-C|SPANX-E|SPANXE SPANX family member C protein-coding chr3-5442 chr3 177406511 177406721 + 6.13 0.000 Intergenic Intergenic -35305 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr5-3488 chr5 172717029 172717239 + 6.13 0.000 Intergenic Intergenic -38369 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr18-2956 chr18 21915442 21915652 + 6.13 0.000 Intergenic LTR16C|LTR|ERVL -84141 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA chr4-6901 chr4 14532528 14532738 + 6.13 0.000 intron (NR_126435, intron 5 of 6) L2b|LINE|L2 355536 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr2-14443 chr2 222891978 222892188 + 6.13 0.000 intron (NM_203372, intron 2 of 15) intron (NM_203372, intron 2 of 15) 31047 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr1-12501 chr1 21279391 21279601 + 6.13 0.000 5' UTR (NM_001113347, exon 1 of 17) 5' UTR (NM_001113347, exon 1 of 17) 119 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr16-6404 chr16 54731245 54731455 + 6.13 0.000 Intergenic L2-1_AMi|LINE|L2 116883 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr12-7275 chr12 52579591 52579801 + 6.13 0.000 Intergenic MER91A|DNA|hAT-Tip100 -5853 NM_175053 121391 Hs.660125 NM_175053 ENSG00000170484 KRT74 ADWH|HTSS2|HYPT3|K6IRS4|KRT5C|KRT6IRS4 keratin 74 protein-coding chr20-2679 chr20 45645742 45645952 + 6.13 0.000 Intergenic SVA_D|Retroposon|SVA -14563 NM_147198 259240 Hs.249828 NM_147198 ENSG00000180205 WFDC9 WAP9|dJ688G8.2 WAP four-disulfide core domain 9 protein-coding chr1-6015 chr1 55612885 55613095 + 6.13 0.000 Intergenic Arthur1|DNA|hAT-Tip100 331973 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr16-5651 chr16 67486762 67486972 + 6.13 0.000 Intergenic Intergenic -3054 NM_001138 181 Hs.104633 NM_001138 ENSG00000159723 AGRP AGRT|ART|ASIP2 agouti related neuropeptide protein-coding chr12-2986 chr12 118095938 118096148 + 6.13 0.000 intron (NM_019086, intron 1 of 8) AluSx|SINE|Alu 7968 NM_019086 54621 Hs.187624 NM_019086 ENSG00000176834 VSIG10 - V-set and immunoglobulin domain containing 10 protein-coding chr5-7298 chr5 14522819 14523029 + 6.13 0.000 Intergenic Intergenic -58868 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 OTULINL FAM105A|NET20 OTU deubiquitinase with linear linkage specificity like protein-coding chrX-3973 chrX 13251402 13251612 + 6.13 0.000 Intergenic Intergenic 51945 NR_146309 109729169 Hs.348675 NR_146309 LINC02154 - long intergenic non-protein coding RNA 2154 ncRNA chr6-2895 chr6 12603397 12603607 + 6.13 0.000 Intergenic Intergenic -18098 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr6-3133 chr6 108372452 108372662 + 6.13 0.000 intron (NR_136553, intron 3 of 8) AluSg|SINE|Alu 77503 NR_136553 246269 Hs.259666 NM_145315 ENSG00000135537 AFG1L AFG1|LACE1|c222389 AFG1 like ATPase protein-coding chr10-7572 chr10 17713438 17713648 + 6.13 0.000 intron (NM_001324284, intron 14 of 14) L2a|LINE|L2 -38658 NM_001098844 653567 Hs.564139 NM_001013629 ENSG00000148483 TMEM236 FAM23A|FAM23B|bA162I21.2|bA16O1.2 transmembrane protein 236 protein-coding chr5-6643 chr5 45404440 45404650 + 6.13 0.000 intron (NM_021072, intron 3 of 7) intron (NM_021072, intron 3 of 7) 291835 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr12-6918 chr12 24480926 24481136 + 6.13 0.000 intron (NM_152989, intron 1 of 17) L1MA2|LINE|L1 81460 NM_001261414 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr1-14429 chr1 45246929 45247139 + 6.13 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -40429 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr5-2074 chr5 149670264 149670474 + 6.13 0.000 Intergenic SVA_D|Retroposon|SVA -59941 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr4-8660 chr4 178217296 178217506 + 6.13 0.000 Intergenic Intergenic -309465 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr6-7720 chr6 89531544 89531754 + 6.13 0.000 intron (NM_001242809, intron 1 of 15) intron (NM_001242809, intron 1 of 15) -30669 NM_001242811 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr4-3439 chr4 85826277 85826487 + 6.13 0.000 intron (NM_001346093, intron 1 of 6) intron (NM_001346093, intron 1 of 6) -1555 NM_001287805 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr1-5757 chr1 118884603 118884813 + 6.13 0.000 3' UTR (NM_001330677, exon 8 of 8) 3' UTR (NM_001330677, exon 8 of 8) 103635 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr7-4737 chr7 61856060 61856270 + 6.13 0.000 Intergenic ALR/Alpha|Satellite|centr 1447891 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr5-4561 chr5 21432025 21432235 + 6.13 0.000 Intergenic Intergenic -27350 NR_027027 728411 Hs.88181 NM_207331 ENSG00000183666 GUSBP1 - GUSB pseudogene 1 pseudo chr17-4905 chr17 73735534 73735744 + 6.13 0.000 Intergenic Intergenic -2215 NM_001278587 100134391 Hs.694655 NM_001278587 LOC100134391 - uncharacterized LOC100134391 protein-coding chr3-10213 chr3 121585330 121585540 + 6.13 0.000 intron (NM_001012659, intron 4 of 4) intron (NM_001012659, intron 4 of 4) -7944 NM_016298 51725 Hs.272564 NM_016298 ENSG00000163833 FBXO40 FBX40 F-box protein 40 protein-coding chr14-2981 chr14 51458147 51458357 + 6.13 0.000 intron (NR_051990, intron 2 of 2) intron (NR_051990, intron 2 of 2) -30876 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr4-7963 chr4 112199625 112199835 + 6.13 0.000 Intergenic Intergenic -32057 NM_001128426 55435 Hs.435991 NM_018569 ENSG00000138660 AP1AR 2C18|C4orf16|GBAR|PRO0971|gamma-BAR adaptor related protein complex 1 associated regulatory protein protein-coding chr16-6906 chr16 84979220 84979430 + 6.13 0.000 intron (NM_001145548, intron 5 of 8) intron (NM_001145548, intron 5 of 8) 32210 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr11-10664 chr11 127494638 127494848 + 6.13 0.000 Intergenic MIRc|SINE|MIR 223673 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr14-2801 chr14 22149732 22149942 + 6.13 0.000 Intergenic MIRb|SINE|MIR 282916 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr9-4922 chr9 12466285 12466495 + 6.13 0.000 Intergenic Intergenic -226995 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr5-8546 chr5 135741443 135741653 + 6.13 0.000 intron (NM_001349335, intron 3 of 10) AluJb|SINE|Alu 61527 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr5-8593 chr5 138188183 138188393 + 6.13 0.000 TTS (NM_005733) TTS (NM_005733) 9176 NM_005733 10112 Hs.718626 NM_005733 ENSG00000112984 KIF20A MKLP2|RAB6KIFL kinesin family member 20A protein-coding chr2-14257 chr2 213766424 213766634 + 6.13 0.000 intron (NR_047660, intron 9 of 14) MER76|LTR|ERVL 8462 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr1-13635 chr1 10380891 10381101 + 6.13 0.000 3' UTR (NM_015074, exon 47 of 47) 3' UTR (NM_015074, exon 47 of 47) -18068 NM_001304451 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr2-14298 chr2 216559600 216559810 + 6.13 0.000 Intergenic Intergenic 47233 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr12-8329 chr12 130275680 130275890 + 6.13 0.000 Intergenic Intergenic -62102 NM_001190971 9271 Hs.405659 NM_004764 ENSG00000125207 PIWIL1 CT80.1|HIWI|MIWI|PIWI piwi like RNA-mediated gene silencing 1 protein-coding chr14-3292 chr14 84125282 84125492 + 6.13 0.000 Intergenic Intergenic -1146545 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr12-4397 chr12 6234100 6234310 + 6.13 0.000 intron (NM_001769, intron 4 of 7) intron (NM_001769, intron 4 of 7) 33805 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr2-11102 chr2 128798457 128798667 + 6.13 0.000 Intergenic Intergenic -66038 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr1-16497 chr1 229709142 229709352 + 6.13 0.000 Intergenic Intergenic 83000 NM_014777 9816 Hs.533628 NM_014777 ENSG00000135763 URB2 KIAA0133|NET10|NPA2 URB2 ribosome biogenesis homolog protein-coding chr11-10490 chr11 118344116 118344326 + 6.13 0.000 promoter-TSS (NM_000073) promoter-TSS (NM_000073) -123 NM_000073 917 Hs.2259 NM_000073 ENSG00000160654 CD3G CD3-GAMMA|IMD17|T3G CD3g molecule protein-coding chr15-3011 chr15 55899418 55899628 + 6.13 0.000 intron (NM_001329212, intron 5 of 28) intron (NM_001329212, intron 5 of 28) 17608 NR_104302 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr18-1871 chr18 26402698 26402908 + 6.13 0.000 Intergenic Intergenic -20192 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr9-7336 chr9 14258868 14259078 + 6.13 0.000 intron (NR_161383, intron 1 of 7) intron (NR_161383, intron 1 of 7) 41291 NM_001369479 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr5-7384 chr5 22364188 22364398 + 6.13 0.000 intron (NM_001364104, intron 2 of 13) intron (NM_001364104, intron 2 of 13) -150443 NM_001364107 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr2-12351 chr2 50420791 50421001 + 6.13 0.000 intron (NM_001330093, intron 17 of 22) MER94|DNA|hAT-Blackjack -73140 NM_138735 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr9-7394 chr9 19582945 19583155 + 6.13 0.000 intron (NM_001193288, intron 3 of 8) L2a|LINE|L2 174041 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chrX-2342 chrX 63695396 63695606 + 6.13 0.000 intron (NM_001353922, intron 4 of 8) L1ME5|LINE|L1 -23999 NR_138419 100874355 Hs.671524 NR_138419 ENSG00000231729 ARHGEF9-IT1 - ARHGEF9 intronic transcript 1 ncRNA chr17-6881 chr17 30053486 30053696 + 6.13 0.000 exon (NM_001145053, exon 10 of 15) exon (NM_001145053, exon 10 of 15) -63216 NM_001261467 84081 Hs.462663 NM_032141 ENSG00000126653 NSRP1 CCDC55|HSPC095|NSrp70 nuclear speckle splicing regulatory protein 1 protein-coding chr2-6697 chr2 25011562 25011772 + 6.13 0.000 intron (NR_034113, intron 2 of 2) AluJb|SINE|Alu -30409 NM_014971 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chrX-3882 chrX 5750506 5750716 + 6.13 0.000 Intergenic AluSx|SINE|Alu -475747 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr7-6219 chr7 131422281 131422491 + 6.13 0.000 intron (NM_001321316, intron 8 of 17) AluJr|SINE|Alu 94510 NM_001321316 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr12-5586 chr12 30069051 30069261 + 6.13 0.000 Intergenic L1MCa|LINE|L1 -284397 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr4-2776 chr4 17327879 17328089 + 6.13 0.000 Intergenic Intergenic -7102 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr18-3557 chr18 77212398 77212608 + 6.13 0.000 Intergenic Intergenic -37345 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr8-6409 chr8 56818957 56819167 + 6.13 0.000 Intergenic L1ME1|LINE|L1 174805 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr5-9004 chr5 165100140 165100350 + 6.13 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 629966 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr13-1692 chr13 79136819 79137029 + 6.13 0.000 Intergenic Intergenic 269297 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr14-5082 chr14 86224836 86225046 + 6.13 0.000 Intergenic Intergenic 290263 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr6-7525 chr6 67956416 67956626 + 6.13 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -98830 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr7-7645 chr7 140259198 140259408 + 6.13 0.000 Intergenic AluSx|SINE|Alu 82042 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr12-6974 chr12 28999015 28999225 + 6.13 0.000 Intergenic Intergenic -150158 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr13-2997 chr13 100414472 100414682 + 6.13 0.000 intron (NR_148027, intron 20 of 23) intron (NR_148027, intron 20 of 23) 66438 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr16-4401 chr16 50479387 50479597 + 6.13 0.000 Intergenic AluJr|SINE|Alu -68904 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr2-13553 chr2 153328631 153328841 + 6.13 0.000 Intergenic L1PA7|LINE|L1 150026 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr12-6132 chr12 407755 407965 + 6.13 0.000 intron (NM_001130146, intron 2 of 11) AluY|SINE|Alu 6216 NM_032358 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr5-9013 chr5 165954804 165955014 + 6.13 0.000 Intergenic AluSq2|SINE|Alu 971461 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chrX-5375 chrX 150549493 150549703 + 6.13 0.000 Intergenic Intergenic -18999 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chrX-5015 chrX 119080157 119080367 + 6.13 0.000 3' UTR (NM_020721, exon 14 of 14) 3' UTR (NM_020721, exon 14 of 14) 70317 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr8-2934 chr8 22234904 22235114 + 6.13 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -2657 NM_001363312 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr9-5543 chr9 109310335 109310545 + 6.13 0.000 intron (NM_019114, intron 1 of 25) L1ME3B|LINE|L1 10524 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr1-16270 chr1 212525802 212526012 + 6.13 0.000 Intergenic Intergenic -19787 NR_125985 101929565 NR_125985 ENSG00000228067 LINC01740 - long intergenic non-protein coding RNA 1740 ncRNA chr22-2431 chr22 19704340 19704550 + 6.13 0.000 Intergenic Intergenic -10058 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding chr1-14663 chr1 59263274 59263484 + 6.13 0.000 Intergenic Intergenic -33434 NM_001350796 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr19-4099 chr19 16025024 16025234 + 6.13 0.000 non-coding (NR_026828, exon 9 of 9) non-coding (NR_026828, exon 9 of 9) -8584 NR_024335 148231 Hs.631621 NR_024335 ENSG00000167459 LINC00905 - long intergenic non-protein coding RNA 905 ncRNA chr11-10198 chr11 95960132 95960342 + 6.13 0.000 Intergenic FLAM_A|SINE|Alu -36030 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr18-1925 chr18 34133871 34134081 + 6.13 0.000 intron (NM_001353232, intron 1 of 9) AluSx4|SINE|Alu -85364 NM_001198549 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr10-8942 chr10 117154185 117154395 + 6.13 0.000 intron (NR_121651, intron 2 of 2) L2b|LINE|L2 13484 NR_037436 100500893 NR_037436 ENSG00000266782 MIR3663 - microRNA 3663 ncRNA chr1-13156 chr1 202676798 202677008 + 6.13 0.000 intron (NM_177402, intron 1 of 8) MSTA|LTR|ERVL-MaLR -33450 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr4-6257 chr4 73693913 73694123 + 6.13 0.000 Intergenic L2a|LINE|L2 -46551 NM_001354840 3576 Hs.624 NM_000584 ENSG00000169429 CXCL8 GCP-1|GCP1|IL8|LECT|LUCT|LYNAP|MDNCF|MONAP|NAF|NAP-1|NAP1 C-X-C motif chemokine ligand 8 protein-coding chr16-6800 chr16 79496257 79496467 + 6.13 0.000 Intergenic Intergenic 104375 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr9-6171 chr9 79883253 79883463 + 6.13 0.000 intron (NR_121213, intron 1 of 2) intron (NR_121213, intron 1 of 2) 58828 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr6-5554 chr6 169650192 169650402 + 6.13 0.000 intron (NM_182552, intron 14 of 25) (ATCC)n|Simple_repeat|Simple_repeat 51732 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr5-5500 chr5 141947596 141947806 + 6.13 0.000 intron (NM_016580, intron 3 of 3) intron (NM_016580, intron 3 of 3) 11361 NM_016580 51294 Hs.439474 NM_016580 ENSG00000113555 PCDH12 VE-cadherin-2|VECAD2 protocadherin 12 protein-coding chr8-7288 chr8 131295649 131295859 + 6.13 0.000 Intergenic Intergenic -254845 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr15-2616 chr15 65674481 65674691 + 6.13 0.000 intron (NM_005848, intron 23 of 31) AluJb|SINE|Alu 22350 NR_145750 109617020 NR_145750 ENSG00000238311 SNORD13E - small nucleolar RNA, C/D box 13E snoRNA chr11-7421 chr11 107677548 107677758 + 6.13 0.000 Intergenic Intergenic 34403 NM_003063 6588 Hs.334629 NM_003063 ENSG00000170290 SLN - sarcolipin protein-coding chr22-2754 chr22 40084902 40085112 + 6.13 0.000 intron (NM_001024843, intron 1 of 23) MLT1F|LTR|ERVL-MaLR 40190 NM_001024843 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr20-3964 chr20 34613956 34614166 + 6.13 0.000 intron (NM_080476, intron 7 of 11) AluJb|SINE|Alu 55343 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chrX-2344 chrX 63994066 63994276 + 6.13 0.000 Intergenic Intergenic -208084 NR_031567 100302115 NR_031567 ENSG00000222532 MIR1468 MIRN1468|hsa-mir-1468|mir-1468 microRNA 1468 ncRNA chr16-2723 chr16 88922553 88922763 + 6.13 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) -17379 NM_001290330 100129697 Hs.689377 NM_001290330 LOC100129697 - uncharacterized LOC100129697 protein-coding chr6-5810 chr6 15921030 15921240 + 6.13 0.000 Intergenic Intergenic -207951 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr6-1897 chr6 170087477 170087687 + 6.13 0.000 Intergenic CpG -73060 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chrX-1329 chrX 133138295 133138505 + 6.13 0.000 Intergenic Intergenic 79954 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr8-4826 chr8 22840317 22840527 + 6.13 0.000 intron (NM_001363233, intron 3 of 6) FLAM_C|SINE|Alu -37550 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr7-4298 chr7 24503943 24504153 + 6.13 0.000 Intergenic MER134|DNA?|DNA? -69404 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr10-8854 chr10 111261149 111261359 + 6.13 0.000 Intergenic Intergenic 146963 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr19-7050 chr19 51656959 51657169 + 6.13 0.000 Intergenic Intergenic -10185 NM_001098612 100049587 Hs.707374 NM_001098612 ENSG00000254415 SIGLEC14 - sialic acid binding Ig like lectin 14 protein-coding chr10-6159 chr10 954358 954568 + 6.13 0.000 Intergenic Intergenic 21437 NR_120629 101927762 Hs.151159 NR_120629 ENSG00000229869 LOC101927762 - uncharacterized LOC101927762 ncRNA chr7-7245 chr7 27258555 27258765 + 6.13 0.000 Intergenic MER5B|DNA|hAT-Charlie -11431 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr1-12046 chr1 113294247 113294457 + 6.13 0.000 Intergenic AluY|SINE|Alu -88099 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr9-6121 chr9 13069929 13070139 + 6.13 0.000 Intergenic L2c|LINE|L2 -97401 NR_132976 106635615 NR_132976 SNORD137 - small nucleolar RNA, C/D box 137 snoRNA chr2-11207 chr2 159815459 159815669 + 6.13 0.000 exon (NM_001198759, exon 31 of 39) exon (NM_001198759, exon 31 of 39) -17309 NM_001198763 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr2-13945 chr2 185411643 185411853 + 6.13 0.000 Intergenic Intergenic -244676 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA chr9-6898 chr9 89894446 89894656 + 6.13 0.000 Intergenic L1MD2|LINE|L1 -74865 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr13-3157 chr13 99710373 99710583 + 6.13 0.000 intron (NR_104592, intron 1 of 9) intron (NR_104592, intron 1 of 9) 18523 NR_120383 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr11-8042 chr11 21536116 21536326 + 6.13 0.000 intron (NM_001288713, intron 17 of 20) L1PA16|LINE|L1 -656864 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr6-2124 chr6 2641274 2641484 + 6.13 0.000 TTS (NR_149118) TTS (NR_149118) -6776 NR_131168 154386 Hs.680574 NM_152554 ENSG00000164385 LINC01600 C6orf195|bA145H9.2 long intergenic non-protein coding RNA 1600 ncRNA chr2-8437 chr2 120345129 120345339 + 6.13 0.000 promoter-TSS (NM_002193) promoter-TSS (NM_002193) -902 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr5-4993 chr5 81105212 81105422 + 6.13 0.000 intron (NM_006909, intron 12 of 26) intron (NM_006909, intron 12 of 26) -128003 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr17-5820 chr17 64991005 64991215 + 6.13 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -15525 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo chr7-8285 chr7 39131246 39131456 + 6.13 0.000 intron (NM_001370959, intron 2 of 9) intron (NM_001370959, intron 2 of 9) -117784 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr1-16526 chr1 231483392 231483602 + 6.13 0.000 Intergenic Intergenic -6972 NR_033826 645339 Hs.382049 NR_033826 SNRPD2P2 - small nuclear ribonucleoprotein D2 pseudogene 2 pseudo chr3-5847 chr3 32872663 32872873 + 6.13 0.000 intron (NM_001039111, intron 1 of 3) intron (NM_001039111, intron 1 of 3) 54771 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr16-6011 chr16 8695586 8695796 + 6.13 0.000 intron (NM_020686, intron 1 of 15) MIRb|SINE|MIR -17278 NM_000663 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr14-3640 chr14 73398308 73398518 + 6.13 0.000 intron (NM_001005743, intron 2 of 12) L1ME4a|LINE|L1 60167 NM_001005744 8650 Hs.525443 NM_003744 ENSG00000133961 NUMB C14orf41|S171|c14_5527 NUMB endocytic adaptor protein protein-coding chr2-11833 chr2 18998456 18998666 + 6.13 0.000 intron (NR_135287, intron 2 of 3) intron (NR_135287, intron 2 of 3) 28410 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr2-12468 chr2 60696051 60696261 + 6.13 0.000 Intergenic Intergenic -60112 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr6-7251 chr6 41836059 41836269 + 6.13 0.000 intron (NM_001286554, intron 1 of 5) intron (NM_001286554, intron 1 of 5) 35473 NM_001286554 25862 Hs.593575 NM_018561 ENSG00000164663 USP49 - ubiquitin specific peptidase 49 protein-coding chr11-6437 chr11 66360644 66360854 + 6.13 0.000 intron (NR_135761, intron 1 of 1) intron (NR_135761, intron 1 of 1) 11011 NM_001532 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr2-11220 chr2 161729677 161729887 + 6.13 0.000 intron (NM_001354443, intron 2 of 25) LTR79|LTR|ERVL 105366 NM_001354455 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr7-5009 chr7 777534 777744 + 6.13 0.000 intron (NR_075098, intron 11 of 12) intron (NR_075098, intron 11 of 12) -37918 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr15-4209 chr15 25945490 25945700 + 6.13 0.000 intron (NR_040082, intron 1 of 4) intron (NR_040082, intron 1 of 4) 43235 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr7-4165 chr7 102425748 102425958 + 6.13 0.000 non-coding (NR_038967, exon 9 of 9) non-coding (NR_038967, exon 9 of 9) -7677 NM_001271818 80228 Hs.363308 NM_032831 ENSG00000160991 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding chr19-6902 chr19 45548290 45548500 + 6.13 0.000 3' UTR (NM_025136, exon 2 of 2) 3' UTR (NM_025136, exon 2 of 2) 36407 NM_001017989 80207 Hs.466945 NM_025136 ENSG00000125741 OPA3 MGA3 outer mitochondrial membrane lipid metabolism regulator OPA3 protein-coding chr19-5849 chr19 42739661 42739871 + 6.13 0.000 intron (NM_021016, intron 1 of 6) intron (NM_021016, intron 1 of 6) 715 NM_021016 5671 Hs.654413 NM_021016 ENSG00000221826 PSG3 - pregnancy specific beta-1-glycoprotein 3 protein-coding chr15-2425 chr15 71219525 71219735 + 6.13 0.000 intron (NM_024817, intron 3 of 16) intron (NM_024817, intron 3 of 16) -30571 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr16-4521 chr16 60866276 60866486 + 6.13 0.000 Intergenic Intergenic 189385 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chrX-4310 chrX 44400639 44400849 + 6.13 0.000 Intergenic Intergenic -57072 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr16-3402 chr16 79651330 79651540 + 6.13 0.000 Intergenic Intergenic -50698 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr6-6127 chr6 159347620 159347830 + 6.13 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -35806 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA chrX-5174 chrX 133159780 133159990 + 6.13 0.000 Intergenic L1PA7|LINE|L1 58469 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr3-10749 chr3 156151884 156152094 + 6.13 0.000 intron (NM_003471, intron 1 of 13) intron (NM_003471, intron 1 of 13) 9027 NM_003471 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr12-3314 chr12 81079523 81079733 + 6.13 0.000 intron (NM_024560, intron 1 of 15) L2b|LINE|L2 1549 NM_024560 79611 Hs.259559 NM_024560 ENSG00000111058 ACSS3 - acyl-CoA synthetase short chain family member 3 protein-coding chr1-16218 chr1 208976657 208976867 + 6.13 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 4308 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr17-7465 chr17 14969330 14969540 + 6.13 0.000 Intergenic L1PB1|LINE|L1 -45370 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr17-7949 chr17 47335699 47335909 + 6.13 0.000 intron (NM_001195192, intron 5 of 21) MSTA|LTR|ERVL-MaLR 11849 NM_152347 124989 Hs.463303 NM_152347 ENSG00000178852 EFCAB13 C17orf57 EF-hand calcium binding domain 13 protein-coding chr12-7223 chr12 50638570 50638780 + 6.13 0.000 intron (NM_173602, intron 2 of 37) intron (NM_173602, intron 2 of 37) -125426 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr5-4452 chr5 5272205 5272415 + 6.13 0.000 intron (NM_139056, intron 18 of 22) MER45A|DNA|hAT-Tip100 131980 NM_139056 170690 Hs.661915 NM_139056 ENSG00000145536 ADAMTS16 ADAMTS16s ADAM metallopeptidase with thrombospondin type 1 motif 16 protein-coding chr19-5804 chr19 36023426 36023636 + 6.13 0.000 intron (NM_001347907, intron 3 of 3) L2c|LINE|L2 9029 NM_001290056 101927572 Hs.676116 NM_001290056 LOC101927572 - uncharacterized LOC101927572 protein-coding chr7-4504 chr7 330389 330599 + 6.13 0.000 Intergenic L1MEg|LINE|L1 -48931 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr8-7358 chr8 136123356 136123566 + 6.13 0.000 Intergenic Intergenic -407337 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr3-7451 chr3 128771580 128771790 + 6.13 0.000 intron (NM_004637, intron 1 of 5) MADE1|DNA|TcMar-Mariner 45549 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr2-13847 chr2 177183794 177184004 + 6.13 0.000 Intergenic Intergenic 28512 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr3-10151 chr3 115238234 115238444 + 6.13 0.000 Intergenic Intergenic -91051 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr13-4271 chr13 97878127 97878337 + 6.13 0.000 Intergenic Intergenic -75443 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr3-7481 chr3 141933943 141934153 + 6.13 0.000 Intergenic Intergenic 57405 NM_001679 483 Hs.477789 NM_001679 ENSG00000069849 ATP1B3 ATPB-3|CD298 ATPase Na+/K+ transporting subunit beta 3 protein-coding chr2-11171 chr2 150155360 150155570 + 6.13 0.000 Intergenic AluJr|SINE|Alu 101542 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr14-4477 chr14 35627029 35627239 + 6.13 0.000 exon (NM_001346249, exon 34 of 42) exon (NM_001346249, exon 34 of 42) 92970 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding chr14-1876 chr14 85320104 85320314 + 6.13 0.000 Intergenic Intergenic 48277 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr20-2960 chr20 33101856 33102066 + 6.13 0.000 intron (NM_182519, intron 12 of 15) intron (NM_182519, intron 12 of 15) 20449 NM_182519 149954 Hs.38961 NM_182519 ENSG00000186191 BPIFB4 C20orf186|LPLUNC4|RY2G5|dJ726C3.5 BPI fold containing family B member 4 protein-coding chr4-3596 chr4 4861948 4862158 + 6.13 0.000 intron (NM_002448, intron 1 of 1) intron (NM_002448, intron 1 of 1) 2388 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr6-8582 chr6 165618181 165618391 + 6.13 0.000 intron (NM_006661, intron 1 of 22) intron (NM_006661, intron 1 of 22) 43814 NM_001130690 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr10-4239 chr10 126797967 126798177 + 6.13 0.000 Intergenic AluSc8|SINE|Alu -107337 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr7-6344 chr7 148923755 148923965 + 6.13 0.000 Intergenic Intergenic -17628 NR_001571 6090 NR_001571 RNY5 Y5|hY5 RNA, Ro60-associated Y5 ncRNA chr1-11454 chr1 85397769 85397979 + 6.13 0.000 intron (NM_001134445, intron 2 of 6) MSTB1|LTR|ERVL-MaLR 6632 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr18-1596 chr18 40068488 40068698 + 6.13 0.000 intron (NR_110791, intron 1 of 3) AluSz6|SINE|Alu 2307 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr20-3706 chr20 15753121 15753331 + 6.13 0.000 intron (NM_001351663, intron 8 of 17) L1PA16|LINE|L1 170088 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr1-9126 chr1 18282548 18282758 + 6.13 0.000 intron (NM_032880, intron 2 of 9) (AC)n|Simple_repeat|Simple_repeat 174855 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr16-6232 chr16 29032183 29032393 + 6.13 0.000 Intergenic AluSz|SINE|Alu -42554 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr1-11057 chr1 225043263 225043473 + 6.13 0.000 intron (NM_001367479, intron 13 of 85) intron (NM_001367479, intron 13 of 85) 113693 NM_001367481 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr15-4579 chr15 59358472 59358682 + 6.13 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 14294 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr7-2299 chr7 76215283 76215493 + 6.13 0.000 intron (NM_001110199, intron 1 of 14) intron (NM_001110199, intron 1 of 14) 13492 NM_001110199 222183 Hs.511025 NM_001039212 ENSG00000177679 SRRM3 - serine/arginine repetitive matrix 3 protein-coding chr5-7627 chr5 46290236 46290446 + 6.13 0.000 Intergenic ALR/Alpha|Satellite|centr -593961 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr1-11314 chr1 20986719 20986929 + 6.13 0.000 intron (NM_001198802, intron 5 of 34) L3|LINE|CR1 1608 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr9-7508 chr9 32665246 32665456 + 6.13 0.000 Intergenic Intergenic -29682 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr6-6199 chr6 13743301 13743511 + 6.13 0.000 Intergenic LTR12C|LTR|ERV1 -31571 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr19-7031 chr19 50322321 50322531 + 6.13 0.000 intron (NR_110912, intron 1 of 3) intron (NR_110912, intron 1 of 3) 6951 NM_004977 3748 Hs.467146 NM_004977 ENSG00000131398 KCNC3 KSHIIID|KV3.3|SCA13 potassium voltage-gated channel subfamily C member 3 protein-coding chr2-8057 chr2 72859964 72860174 + 6.13 0.000 Intergenic Intergenic -27339 NM_003124 6697 Hs.301540 NM_003124 ENSG00000116096 SPR SDR38C1 sepiapterin reductase protein-coding chr8-3703 chr8 18876465 18876675 + 6.13 0.000 intron (NM_015310, intron 2 of 15) AluJb|SINE|Alu 10487 NM_001362819 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr11-8824 chr11 12017294 12017504 + 6.13 0.000 Intergenic Intergenic -8029 NM_013253 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr7-5170 chr7 6615094 6615304 + 6.13 0.000 promoter-TSS (NM_017560) promoter-TSS (NM_017560) -411 NM_017560 54753 Hs.592170 NM_017560 ENSG00000236609 ZNF853 - zinc finger protein 853 protein-coding chr14-2545 chr14 23385154 23385364 + 6.13 0.000 intron (NM_002471, intron 34 of 38) intron (NM_002471, intron 34 of 38) 3407 NR_029595 406990 NR_029595 ENSG00000199157 MIR208A MIR208|MIRN208|MIRN208A|hsa-mir-208a|miRNA208 microRNA 208a ncRNA chr17-6285 chr17 43610293 43610503 + 6.13 0.000 Intergenic L2b|LINE|L2 51165 NM_013999 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr8-7454 chr8 141464163 141464373 + 6.13 0.000 intron (NR_102364, intron 18 of 26) Tigger1|DNA|TcMar-Tigger 42880 NM_007079 11156 Hs.43666 NM_007079 ENSG00000184489 PTP4A3 PRL-3|PRL-R|PRL3 protein tyrosine phosphatase 4A3 protein-coding chr14-2568 chr14 36558712 36558922 + 6.13 0.000 Intergenic Intergenic 23797 NM_014360 26257 Hs.234763 NM_014360 ENSG00000136327 NKX2-8 NKX2.8|NKX2H|Nkx2-9 NK2 homeobox 8 protein-coding chr6-6242 chr6 26257362 26257572 + 6.13 0.000 Intergenic LTR22A|LTR|ERVK 5816 NM_003524 8345 Hs.247815 NM_003524 ENSG00000275713 HIST1H2BH H2B/j|H2BFJ histone cluster 1 H2B family member h protein-coding chr20-1592 chr20 4614161 4614371 + 6.13 0.000 Intergenic Intergenic -72190 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr2-11069 chr2 120788662 120788872 + 6.13 0.000 intron (NM_001371271, intron 1 of 13) intron (NM_001371271, intron 1 of 13) -3514 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2-12506 chr2 63926368 63926578 + 6.13 0.000 intron (NM_001005739, intron 12 of 22) intron (NM_001005739, intron 12 of 22) 84593 NM_006759 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr9-6901 chr9 90860516 90860726 + 6.13 0.000 intron (NM_001174167, intron 3 of 13) intron (NM_001174167, intron 3 of 13) 33201 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr11-4804 chr11 4164274 4164484 + 6.13 0.000 Intergenic Intergenic -22773 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LINC02749 - long intergenic non-protein coding RNA 2749 ncRNA chr4-5897 chr4 134352448 134352658 + 6.13 0.000 Intergenic Intergenic -71315 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr12-5970 chr12 88579168 88579378 + 6.13 0.000 intron (NM_000899, intron 1 of 9) intron (NM_000899, intron 1 of 9) 1198 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr13-3387 chr13 87108139 87108349 + 6.13 0.000 Intergenic Intergenic 196324 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr15-2883 chr15 42104160 42104370 + 6.13 0.000 Intergenic Intergenic -9703 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr17-5339 chr17 28961609 28961819 + 6.13 0.000 intron (NM_001290202, intron 5 of 16) intron (NM_001290202, intron 5 of 16) -10196 NM_001290131 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr11-9114 chr11 32867209 32867419 + 6.13 0.000 Intergenic L1PREC2|LINE|L1 -25497 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr14-3812 chr14 69268014 69268224 + 6.13 0.000 intron (NM_020692, intron 1 of 15) intron (NM_020692, intron 1 of 15) 7961 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr9-8910 chr9 136916307 136916517 + 6.13 0.000 intron (NM_021138, intron 6 of 10) intron (NM_021138, intron 6 of 10) 28326 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr5-8760 chr5 147535388 147535598 + 6.13 0.000 Intergenic Intergenic -24501 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA chr18-3263 chr18 50688151 50688361 + 6.13 0.000 intron (NM_002747, intron 2 of 5) intron (NM_002747, intron 2 of 5) 128169 NM_001292039 5596 Hs.433728 NM_002747 ENSG00000141639 MAPK4 ERK-4|ERK4|PRKM4|p63-MAPK|p63MAPK mitogen-activated protein kinase 4 protein-coding chrX-3283 chrX 102835729 102835939 + 6.13 0.000 intron (NR_146590, intron 3 of 6) intron (NR_146590, intron 3 of 6) 66681 NR_146592 100287765 Hs.556850 NR_038988 LINC00630 - long intergenic non-protein coding RNA 630 ncRNA chr6-7693 chr6 86538167 86538377 + 6.13 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -399256 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr14-3287 chr14 83636641 83636851 + 6.13 0.000 Intergenic Intergenic 994114 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr22-4069 chr22 42565523 42565733 + 6.13 0.000 intron (NR_104301, intron 8 of 10) AluJb|SINE|Alu 11672 NM_014509 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr16-6710 chr16 71857732 71857942 + 6.13 0.000 TTS (NM_001137675) TTS (NM_001137675) 11861 NM_001137675 342371 Hs.743239 NM_001137675 ENSG00000224470 ATXN1L BOAT|BOAT1 ataxin 1 like protein-coding chr7-6146 chr7 124649890 124650100 + 6.13 0.000 Intergenic Intergenic 115797 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr1-12565 chr1 30133805 30134015 + 6.13 0.000 Intergenic L2c|LINE|L2 -96298 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr6-3642 chr6 132655812 132656022 + 6.13 0.000 Intergenic L2|LINE|L2 -9891 NM_138327 134864 Hs.375030 NM_138327 ENSG00000146399 TAAR1 TA1|TAR1|TRAR1 trace amine associated receptor 1 protein-coding chr1-6018 chr1 59707196 59707406 + 6.13 0.000 intron (NM_001350790, intron 15 of 16) MIRb|SINE|MIR 25995 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr5-8203 chr5 107169887 107170097 + 6.13 0.000 Intergenic CR1_Mam|LINE|CR1 -158978 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chrX-4722 chrX 89500198 89500408 + 6.13 0.000 Intergenic MST-int|LTR|ERVL-MaLR -421605 NM_138960 90316 Hs.592220 NM_138960 ENSG00000153779 TGIF2LX TGIFLX TGFB induced factor homeobox 2 like X-linked protein-coding chr22-3856 chr22 32880005 32880215 + 6.13 0.000 intron (NM_003490, intron 4 of 13) intron (NM_003490, intron 4 of 13) 79294 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr11-8144 chr11 57955822 57956032 + 6.13 0.000 Intergenic AluSx1|SINE|Alu -67954 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr20-1958 chr20 34074430 34074640 + 6.13 0.000 intron (NM_016732, intron 5 of 9) intron (NM_016732, intron 5 of 9) 25416 NR_039911 100616434 NR_039911 ENSG00000264616 MIR4755 mir-4755 microRNA 4755 ncRNA chr8-1771 chr8 56876273 56876483 + 6.13 0.000 Intergenic Intergenic 117489 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr17-7600 chr17 21821281 21821491 + 6.13 0.000 Intergenic Intergenic 128863 NM_001194958 100134444 Hs.200629 NM_001194958 ENSG00000260458 KCNJ18 KIR2.6|TTPP2 potassium voltage-gated channel subfamily J member 18 protein-coding chr2-7670 chr2 29247450 29247660 + 6.13 0.000 intron (NM_004304, intron 12 of 28) intron (NM_004304, intron 12 of 28) -23655 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr7-4946 chr7 138661609 138661819 + 6.13 0.000 intron (NM_001331192, intron 2 of 12) LTR23|LTR|ERV1 2510 NM_001331192 136306 Hs.99414 NM_174959 ENSG00000157703 SVOPL - SVOP like protein-coding chr17-7715 chr17 32661394 32661604 + 6.13 0.000 intron (NM_015194, intron 16 of 21) AluJb|SINE|Alu 174506 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr16-5299 chr16 68187361 68187571 + 6.13 0.000 intron (NM_004555, intron 8 of 10) MER52A|LTR|ERV1 46033 NR_106831 102466194 NR_106831 ENSG00000284259 MIR6773 hsa-mir-6773 microRNA 6773 ncRNA chr4-7430 chr4 66900913 66901123 + 6.13 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger 520982 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr20-4016 chr20 36456310 36456520 + 6.13 0.000 intron (NM_001365621, intron 7 of 12) intron (NM_001365621, intron 7 of 12) -5053 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr2-11605 chr2 2893001 2893211 + 6.13 0.000 Intergenic L2c|LINE|L2 232920 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr9-7530 chr9 34165319 34165529 + 6.13 0.000 Intergenic AluYk2|SINE|Alu -13581 NM_001171202 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr6-7372 chr6 48950057 48950267 + 6.13 0.000 Intergenic Intergenic 513091 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr4-4193 chr4 11720391 11720601 + 6.13 0.000 Intergenic Intergenic 48972 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr16-6427 chr16 56351055 56351265 + 6.13 0.000 intron (NM_020988, intron 6 of 8) intron (NM_020988, intron 6 of 8) 73829 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr17-7979 chr17 48310574 48310784 + 6.13 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) 16332 NR_131239 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chrX-3545 chrX 57400566 57400776 + 6.13 0.000 intron (NM_001353840, intron 7 of 9) HERV17-int|LTR|ERV1 113817 NR_148564 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding chr22-4039 chr22 41351159 41351369 + 6.13 0.000 intron (NM_017590, intron 16 of 22) intron (NM_017590, intron 16 of 22) -16069 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr3-6340 chr3 81329783 81329993 + 6.13 0.000 Intergenic Intergenic 336020 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr1-11256 chr1 1759913 1760123 + 6.13 0.000 intron (NM_001198994, intron 3 of 13) intron (NM_001198994, intron 3 of 13) -1376 NM_001198995 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chrX-4735 chrX 91453886 91454096 + 6.13 0.000 Intergenic MER57A-int|LTR|ERV1 -18992 NR_110659 102724167 Hs.571694 NR_110659 ENSG00000234161 PABPC5-AS1 CXorf46 PABPC5 antisense RNA 1 ncRNA chr12-7020 chr12 32924235 32924445 + 6.13 0.000 Intergenic L1PA11|LINE|L1 -27494 NM_001005242 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr3-5945 chr3 45365176 45365386 + 6.13 0.000 Intergenic Intergenic -23295 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr7-9734 chr7 157360949 157361159 + 6.13 0.000 intron (NM_005494, intron 2 of 7) intron (NM_005494, intron 2 of 7) 24050 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr5-5226 chr5 116256783 116256993 + 6.13 0.000 intron (NM_001308080, intron 5 of 6) Tigger4|DNA|TcMar-Tigger 1145 NR_162144 113219464 NR_162144 MIR12130 - microRNA 12130 ncRNA chr10-6827 chr10 19951856 19952066 + 6.13 0.000 intron (NM_032812, intron 1 of 13) L1PA16|LINE|L1 135529 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr11-5830 chr11 8327673 8327883 + 6.13 0.000 Intergenic Intergenic -58991 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr2-8095 chr2 75595700 75595910 + 6.13 0.000 Intergenic Intergenic -26086 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr18-385 chr18 58839075 58839285 + 6.13 0.000 Intergenic Intergenic -23744 NR_148459 55205 Hs.529023 NM_018181 ENSG00000074657 ZNF532 - zinc finger protein 532 protein-coding chr17-4639 chr17 13154430 13154640 + 6.13 0.000 Intergenic Charlie2b|DNA|hAT-Charlie -136471 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr5-5113 chr5 101327790 101328000 + 6.13 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -424613 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr18-2921 chr18 12789397 12789607 + 6.13 0.000 intron (NM_080423, intron 8 of 8) intron (NM_080423, intron 8 of 8) -40080 NR_110763 100996324 Hs.333275 NR_110763 LINC01882 - long intergenic non-protein coding RNA 1882 ncRNA chr8-6641 chr8 78285205 78285415 + 6.13 0.000 Intergenic MER77B|LTR|ERVL -231030 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr18-3460 chr18 68959460 68959670 + 6.13 0.000 intron (NM_001093729, intron 8 of 9) L1MA3|LINE|L1 161485 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr7-7456 chr7 89289743 89289953 + 6.13 0.000 intron (NM_181646, intron 2 of 3) L1M1|LINE|L1 -494111 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr13-3952 chr13 61091338 61091548 + 6.13 0.000 Intergenic HERVH-int|LTR|ERV1 108437 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr5-6903 chr5 132979931 132980141 + 6.13 0.000 Intergenic L1MB8|LINE|L1 -16402 NM_014423 27125 Hs.519313 NM_014423 ENSG00000072364 AFF4 AF5Q31|CHOPS|MCEF AF4/FMR2 family member 4 protein-coding chr11-8725 chr11 7347821 7348031 + 6.13 0.000 intron (NM_175733, intron 3 of 6) intron (NM_175733, intron 3 of 6) 96022 NM_175733 143425 Hs.177193 NM_175733 ENSG00000170743 SYT9 - synaptotagmin 9 protein-coding chr5-6873 chr5 123258643 123258853 + 6.13 0.000 Intergenic L1P2|LINE|L1 164844 NM_153223 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr3-5454 chr3 179902421 179902631 + 6.13 0.000 intron (NR_110061, intron 3 of 3) intron (NR_110061, intron 3 of 3) 2989 NR_110061 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr19-6217 chr19 6011823 6012033 + 6.13 0.000 intron (NM_000635, intron 8 of 17) MER58A|DNA|hAT-Charlie 33525 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA chr16-5542 chr16 27756455 27756665 + 6.13 0.000 intron (NM_015202, intron 18 of 27) MIRb|SINE|MIR -37531 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr3-6057 chr3 50555042 50555252 + 6.13 0.000 Intergenic Intergenic 12600 NM_016210 51161 Hs.517860 NM_016210 ENSG00000088543 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding chr1-15174 chr1 108801099 108801309 + 6.13 0.000 intron (NM_007269, intron 17 of 18) L1M4a1|LINE|L1 54530 NM_007269 6814 Hs.530436 NM_007269 ENSG00000116266 STXBP3 MUNC18-3|MUNC18C|PSP|UNC-18C syntaxin binding protein 3 protein-coding chr4-7262 chr4 47761101 47761311 + 6.13 0.000 intron (NM_006587, intron 4 of 21) Tigger1|DNA|TcMar-Tigger -70139 NR_125881 101927179 Hs.570822 NR_125880 LOC101927179 - uncharacterized LOC101927179 ncRNA chr5-3901 chr5 158980162 158980372 + 6.13 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 117689 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr1-13946 chr1 24152361 24152571 + 6.13 0.000 Intergenic AluSz6|SINE|Alu -9326 NM_021258 58985 Hs.110915 NM_021258 ENSG00000142677 IL22RA1 CRF2-9|IL22R|IL22R1 interleukin 22 receptor subunit alpha 1 protein-coding chr3-9710 chr3 65912814 65913024 + 6.13 0.000 intron (NR_145422, intron 1 of 2) intron (NR_145422, intron 1 of 2) 19103 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr1-14754 chr1 67724081 67724291 + 6.13 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 38985 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr5-7433 chr5 29914187 29914397 + 6.13 0.000 Intergenic L1PA13|LINE|L1 33732 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chr1-15444 chr1 153930924 153931134 + 6.13 0.000 exon (NM_001367466, exon 25 of 28) exon (NM_001367466, exon 25 of 28) -8057 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr10-7784 chr10 35815130 35815340 + 6.13 0.000 Intergenic Intergenic 36933 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr3-4613 chr3 9095738 9095948 + 6.13 0.000 intron (NM_014850, intron 3 of 21) AluJr|SINE|Alu -96650 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr3-5265 chr3 112967075 112967285 + 6.13 0.000 intron (NM_138806, intron 1 of 7) L2b|LINE|L2 7923 NM_138806 131450 Hs.309158 NM_138806 ENSG00000163606 CD200R1 CD200R|HCRTR2|MOX2R|OX2R CD200 receptor 1 protein-coding chr12-7705 chr12 90784917 90785127 + 6.13 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -133001 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr10-8078 chr10 67723561 67723771 + 6.13 0.000 Intergenic Intergenic -27471 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chr14-2877 chr14 34063992 34064202 + 6.13 0.000 Intergenic Intergenic -113023 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr10-8373 chr10 80814559 80814769 + 6.13 0.000 Intergenic LTR12C|LTR|ERV1 164867 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr5-7359 chr5 18516393 18516603 + 6.13 0.000 Intergenic L1ME1|LINE|L1 709224 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr4-8061 chr4 121765175 121765385 + 6.13 0.000 promoter-TSS (NM_152399) promoter-TSS (NM_152399) -116 NM_152399 132332 Hs.27524 NM_152399 ENSG00000164112 TMEM155 - transmembrane protein 155 protein-coding chr4-4318 chr4 31658859 31659069 + 6.13 0.000 Intergenic Intergenic 152420 NR_149122 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr3-9527 chr3 52324831 52325041 + 6.13 0.000 intron (NM_015512, intron 3 of 77) intron (NM_015512, intron 3 of 77) 8617 NM_015512 25981 Hs.655469 NM_015512 ENSG00000114841 DNAH1 CILD37|DNAHC1|HDHC7|HL-11|HL11|HSRF-1|SPGF18|XLHSRF-1 dynein axonemal heavy chain 1 protein-coding chr7-5727 chr7 72859333 72859543 + 6.13 0.000 Intergenic PABL_B-int|LTR|ERV1 9653 NR_003666 441251 Hs.591819 NM_001034844 ENSG00000179994 SPDYE7P - speedy/RINGO cell cycle regulator family member E7, pseudogene pseudo chr2-4928 chr2 163572475 163572685 + 6.13 0.000 Intergenic Intergenic 163428 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr1-9501 chr1 37653125 37653335 + 6.13 0.000 Intergenic Intergenic -18338 NM_001242910 284654 Hs.135015 NM_173640 ENSG00000169218 RSPO1 CRISTIN3|RSPO R-spondin 1 protein-coding chr9-7065 chr9 125436097 125436307 + 6.13 0.000 Intergenic L3|LINE|CR1 174376 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr4-5589 chr4 181598572 181598782 + 6.13 0.000 Intergenic Intergenic 231296 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr16-6196 chr16 27140529 27140739 + 6.13 0.000 Intergenic L2|LINE|L2 -62892 NM_024773 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr2-4000 chr2 95305984 95306194 + 6.13 0.000 intron (NM_013434, intron 1 of 8) L1MD2|LINE|L1 8742 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr4-6970 chr4 20760249 20760459 + 6.13 0.000 intron (NM_025221, intron 2 of 7) intron (NM_025221, intron 2 of 7) 59896 NM_001330747 133015 Hs.479298 NM_145048 ENSG00000163138 PACRGL C4orf28 parkin coregulated like protein-coding chr20-1587 chr20 3973815 3974025 + 6.13 0.000 intron (NM_001134337, intron 1 of 5) L1MD1|LINE|L1 41638 NM_001134338 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr3-3243 chr3 43105898 43106108 + 6.13 0.000 promoter-TSS (NM_032806) promoter-TSS (NM_032806) 76 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chr11-7342 chr11 66208192 66208402 + 6.13 0.000 intron (NM_018026, intron 2 of 23) intron (NM_018026, intron 2 of 23) -48997 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr15-1178 chr15 26411610 26411820 + 6.13 0.000 Intergenic AluY|SINE|Alu 217375 NR_103801 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr13-3028 chr13 22587086 22587296 + 6.13 0.000 Intergenic Tigger4b|DNA|TcMar-Tigger 310990 NR_033774 646201 Hs.729338 NR_033774 BASP1P1 - BASP1 pseudogene 1 pseudo chrX-1731 chrX 35728744 35728954 + 6.13 0.000 Intergenic LTR22C2|LTR|ERVK -69493 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr3-2899 chr3 49587674 49587884 + 6.13 0.000 intron (NM_003458, intron 1 of 11) MER51A|LTR|ERV1 33302 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr8-3202 chr8 120780305 120780515 + 6.13 0.000 intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) 19157 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr5-1623 chr5 115296265 115296475 + 6.13 0.000 promoter-TSS (NM_152549) promoter-TSS (NM_152549) -80 NM_152549 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr4-6573 chr4 187289621 187289831 + 6.13 0.000 Intergenic Intergenic -80922 NR_149103 105377602 Hs.582096 NR_149103 ENSG00000250042 LINC02514 - long intergenic non-protein coding RNA 2514 ncRNA chr8-2981 chr8 93537999 93538209 + 6.13 0.000 intron (NR_033858, intron 6 of 10) (ATATAC)n|Simple_repeat|Simple_repeat 162329 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr17-8284 chr17 68485171 68485381 + 6.13 0.000 intron (NM_001278433, intron 1 of 10) intron (NM_001278433, intron 1 of 10) -26504 NM_212471 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chrX-3821 chrX 148214634 148214844 + 6.13 0.000 Intergenic L5|LINE|RTE-X 233402 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr1-14637 chr1 57254065 57254275 + 6.13 0.000 intron (NM_001353980, intron 5 of 5) intron (NM_001353980, intron 5 of 5) 168942 NM_001365793 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr4-6871 chr4 10724876 10725086 + 6.13 0.000 Intergenic Intergenic -40213 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr10-8967 chr10 118913689 118913899 + 6.13 0.000 Intergenic Intergenic -115920 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr14-2986 chr14 51670026 51670236 + 6.13 0.000 intron (NM_001267046, intron 1 of 13) AluJb|SINE|Alu 18221 NM_152330 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr8-2152 chr8 33509363 33509573 + 6.13 0.000 intron (NM_001102401, intron 3 of 7) AluSg7|SINE|Alu 3667 NM_001330505 80185 Hs.77135 NM_025115 ENSG00000129696 TTI2 C8orf41|MRT39 TELO2 interacting protein 2 protein-coding chrX-3409 chrX 9821076 9821286 + 6.13 0.000 intron (NM_001649, intron 1 of 9) intron (NM_001649, intron 1 of 9) 34752 NM_001649 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr7-8981 chr7 100235320 100235530 + 6.13 0.000 intron (NR_028038, intron 1 of 6) AluJr|SINE|Alu 16177 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr9-8198 chr9 108187117 108187327 + 6.13 0.000 Intergenic Intergenic 668764 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr9-7406 chr9 20873621 20873831 + 6.13 0.000 intron (NM_017794, intron 20 of 45) intron (NM_017794, intron 20 of 45) 86799 NR_145762 109616992 NR_145762 ENSG00000202189 SNORA30B - small nucleolar RNA, H/ACA box 30B snoRNA chr4-5733 chr4 48900749 48900959 + 6.13 0.000 intron (NM_001014446, intron 2 of 6) AluJb|SINE|Alu 5920 NM_001014446 132299 Hs.95835 NM_152398 ENSG00000145247 OCIAD2 - OCIA domain containing 2 protein-coding chr9-4450 chr9 21558155 21558365 + 6.13 0.000 intron (NR_152877, intron 1 of 3) intron (NR_152877, intron 1 of 3) 1538 NR_152877 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chr13-4089 chr13 77776129 77776339 + 6.13 0.000 Intergenic LTR16C|LTR|ERVL 35015 NM_001366666 122060 Hs.349955 NM_144595 ENSG00000139737 SLAIN1 C13orf32 SLAIN motif family member 1 protein-coding chr6-6714 chr6 1216615 1216825 + 6.13 0.000 Intergenic Intergenic -95378 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr7-8683 chr7 73725859 73726069 + 6.13 0.000 Intergenic Intergenic -6295 NM_001165903 6804 Hs.647024 NM_004603 ENSG00000106089 STX1A HPC-1|P35-1|STX1|SYN1A syntaxin 1A protein-coding chr16-6377 chr16 52657800 52658010 + 6.13 0.000 Intergenic L1MA5A|LINE|L1 -50930 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr6-4212 chr6 4192272 4192482 + 6.13 0.000 Intergenic Intergenic -2348 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr15-5222 chr15 96503989 96504199 + 6.13 0.000 Intergenic Intergenic 170329 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr11-7074 chr11 121116797 121117007 + 6.13 0.000 intron (NM_005422, intron 5 of 22) intron (NM_005422, intron 5 of 22) 14236 NM_005422 7007 Hs.248162 NM_005422 ENSG00000109927 TECTA DFNA12|DFNA8|DFNB21 tectorin alpha protein-coding chr10-7204 chr10 112917923 112918133 + 6.13 0.000 Intergenic Intergenic -32219 NM_001146283 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr18-1586 chr18 37393120 37393330 + 6.13 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 73279 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr10-7411 chr10 4344042 4344252 + 6.13 0.000 Intergenic Intergenic -40099 NR_108054 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr1-16077 chr1 202661304 202661514 + 6.13 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) -17956 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr1-16520 chr1 230936959 230937169 + 6.13 0.000 intron (NM_024525, intron 8 of 22) intron (NM_024525, intron 8 of 22) 41797 NM_001122835 79573 Hs.424788 NM_024525 ENSG00000143643 TTC13 - tetratricopeptide repeat domain 13 protein-coding chr1-14160 chr1 32566734 32566944 + 6.13 0.000 intron (NR_111980, intron 2 of 3) intron (NR_111980, intron 2 of 3) 27412 NR_111980 653121 Hs.546479 NM_144621 ENSG00000160062 ZBTB8A BOZF1|ZBTB8|ZNF916A zinc finger and BTB domain containing 8A protein-coding chr20-4468 chr20 62549241 62549451 + 6.13 0.000 intron (NR_033263, intron 1 of 6) intron (NR_033263, intron 1 of 6) -1107 NM_178463 128826 Hs.86507 NM_178463 MIR1-1HG C20orf166|MIR133A2HG MIR1-1 host gene protein-coding chr11-8895 chr11 15800411 15800621 + 6.13 0.000 Intergenic Intergenic 156631 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr10-7473 chr10 9678002 9678212 + 6.13 0.000 Intergenic Intergenic -380615 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA chr4-3948 chr4 173074706 173074916 + 6.13 0.000 Intergenic Intergenic -94000 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr12-5364 chr12 119028993 119029203 + 6.13 0.000 intron (NM_194286, intron 1 of 12) intron (NM_194286, intron 1 of 12) 47557 NM_194286 84530 Hs.744964 NM_194286 ENSG00000139767 SRRM4 KIAA1853|MU-MB-2.76|nSR100 serine/arginine repetitive matrix 4 protein-coding chrX-3123 chrX 9087638 9087848 + 6.13 0.000 Intergenic Intergenic -53616 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding chr1-8155 chr1 15417863 15418073 + 6.13 0.000 intron (NM_024329, intron 1 of 3) intron (NM_024329, intron 1 of 3) 8080 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr1-15273 chr1 114855228 114855438 + 6.13 0.000 intron (NM_003176, intron 1 of 31) intron (NM_003176, intron 1 of 31) 470 NR_104211 6847 Hs.112743 NM_003176 ENSG00000198765 SYCP1 CT8|HOM-TES-14|SCP-1|SCP1 synaptonemal complex protein 1 protein-coding chrX-1557 chrX 48021648 48021858 + 6.13 0.000 Intergenic Intergenic 14012 NM_001079900 729201 Hs.319319 NM_001079900 ENSG00000171478 SPACA5B LYZL5B sperm acrosome associated 5B protein-coding chr8-7074 chr8 117281217 117281427 + 6.13 0.000 Intergenic L2c|LINE|L2 146327 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr5-3232 chr5 93581499 93581709 + 6.13 0.000 promoter-TSS (NR_021491) promoter-TSS (NR_021491) -284 NR_021490 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr8-6505 chr8 65542958 65543168 + 6.13 0.000 intron (NR_033893, intron 1 of 4) L1MB1|LINE|L1 19603 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr6-5125 chr6 121794724 121794934 + 6.13 0.000 Intergenic Intergenic 359183 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr7-9287 chr7 126056721 126056931 + 6.13 0.000 Intergenic L1MA3|LINE|L1 -792535 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr3-9889 chr3 82647146 82647356 + 6.13 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 661109 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr13-2492 chr13 51999423 51999633 + 6.13 0.000 intron (NM_001005918, intron 1 of 16) intron (NM_001005918, intron 1 of 16) 11922 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chr6-7943 chr6 111132255 111132465 + 6.13 0.000 intron (NM_018593, intron 1 of 5) HERV17-int|LTR|ERV1 18526 NR_145796 109623478 NR_145796 SNORD166 - small nucleolar RNA, C/D box 166 snoRNA chr7-8803 chr7 82916238 82916448 + 6.13 0.000 exon (NM_014510, exon 7 of 20) exon (NM_014510, exon 7 of 20) 246541 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr6-8368 chr6 149164442 149164652 + 6.13 0.000 Intergenic L2b|LINE|L2 -53377 NR_125861 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr5-6223 chr5 78144192 78144402 + 6.13 0.000 intron (NM_003664, intron 14 of 26) intron (NM_003664, intron 14 of 26) 150401 NM_001271769 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding chr8-2732 chr8 101734135 101734345 + 6.13 0.000 intron (NM_001040625, intron 4 of 6) intron (NM_001040625, intron 4 of 6) 56729 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr17-6948 chr17 43569485 43569695 + 6.13 0.000 Intergenic Intergenic -23250 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr16-2787 chr16 47181399 47181609 + 6.13 0.000 intron (NM_030790, intron 14 of 17) SVA_D|Retroposon|SVA 37436 NR_110903 101927102 Hs.634652 NR_110903 ITFG1-AS1 - ITFG1 antisense RNA 1 ncRNA chr7-6906 chr7 73907185 73907395 + 6.13 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 46131 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr12-6220 chr12 27069291 27069501 + 6.13 0.000 Intergenic AluJr|SINE|Alu 13126 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr6-8075 chr6 124373265 124373475 + 6.13 0.000 intron (NM_153355, intron 3 of 5) L2|LINE|L2 90365 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr10-7975 chr10 58839178 58839388 + 6.13 0.000 Intergenic Intergenic 124268 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr7-8133 chr7 27695446 27695656 + 6.13 0.000 Intergenic MER31A|LTR|ERV1 -32668 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding chr4-7452 chr4 69154104 69154314 + 6.13 0.000 Intergenic Intergenic -27891 NR_136191 105377267 Hs.654304 NR_136191 ENSG00000250696 LOC105377267 - uncharacterized LOC105377267 ncRNA chr1-13508 chr1 4961747 4961957 + 6.13 0.000 Intergenic AluSc|SINE|Alu 307243 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr19-3841 chr19 15174187 15174397 + 6.13 0.000 exon (NM_000435, exon 25 of 33) exon (NM_000435, exon 25 of 33) 5058 NR_106853 102465476 NR_106853 ENSG00000275711 MIR6795 hsa-mir-6795 microRNA 6795 ncRNA chr19-6443 chr19 16138924 16139134 + 6.13 0.000 intron (NR_163150, intron 1 of 7) AluSx|SINE|Alu -4656 NR_163156 84941 Hs.631617 NM_032855 ENSG00000196684 HSH2D ALX|HSH2 hematopoietic SH2 domain containing protein-coding chr2-12108 chr2 34390098 34390308 + 6.13 0.000 Intergenic L2b|LINE|L2 -287354 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr15-3850 chr15 85036843 85037053 + 6.13 0.000 intron (NM_173454, intron 1 of 20) LTR78|LTR|ERV1 54974 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr11-8858 chr11 13297904 13298114 + 6.13 0.000 intron (NM_001351822, intron 1 of 18) L2a|LINE|L2 20282 NM_001351822 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr20-3870 chr20 29044413 29044623 + 6.13 0.000 Intergenic Intergenic -35872 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr18-3349 chr18 57548797 57549007 + 6.13 0.000 3' UTR (NM_001012515, exon 11 of 11) 3' UTR (NM_001012515, exon 11 of 11) 37800 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chrX-903 chrX 100671329 100671539 + 6.13 0.000 3' UTR (NM_014467, exon 11 of 11) 3' UTR (NM_014467, exon 11 of 11) 27235 NM_014467 27286 Hs.306339 NM_014467 ENSG00000102359 SRPX2 BPP|CBPS|PMGX|RESDX|SRPUL sushi repeat containing protein X-linked 2 protein-coding chr11-10425 chr11 115729796 115730006 + 6.13 0.000 Intergenic Intergenic 4861 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr1-11102 chr1 229879884 229880094 + 6.13 0.000 intron (NR_146476, intron 1 of 1) intron (NR_146476, intron 1 of 1) 5829 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr2-7159 chr2 201882829 201883039 + 6.13 0.000 intron (NM_001261435, intron 12 of 13) intron (NM_001261435, intron 12 of 13) 76355 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr13-3113 chr13 68559189 68559399 + 6.13 0.000 Intergenic Intergenic 326031 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr12-7959 chr12 109783924 109784134 + 6.13 0.000 intron (NM_001177431, intron 15 of 15) MIRb|SINE|MIR -10542 NR_026662 84983 Hs.675961 NM_032897 ENSG00000255650 FAM222A-AS1 - FAM222A antisense RNA 1 ncRNA chr16-5224 chr16 28593158 28593368 + 6.13 0.000 exon (NM_177528, exon 6 of 8) exon (NM_177528, exon 6 of 8) 3217 NM_177528 6799 Hs.546304 NM_001054 ENSG00000197165 SULT1A2 HAST4|P-PST|P-PST 2|ST1A2|STP2|TSPST2 sulfotransferase family 1A member 2 protein-coding chr22-3741 chr22 26353358 26353568 + 6.13 0.000 intron (NM_001184777, intron 12 of 14) intron (NM_001184777, intron 12 of 14) -75797 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr8-7459 chr8 141623913 141624123 + 6.13 0.000 Intergenic Intergenic -116788 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr4-4293 chr4 26493872 26494082 + 6.13 0.000 Intergenic Intergenic -3493 NM_000730 886 Hs.129 NM_000730 ENSG00000163394 CCKAR CCK-A|CCK1-R|CCK1R|CCKRA cholecystokinin A receptor protein-coding chr5-7920 chr5 77946972 77947182 + 6.13 0.000 intron (NR_105012, intron 1 of 1) intron (NR_105012, intron 1 of 1) -11170 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr6-2985 chr6 41428039 41428249 + 6.13 0.000 Intergenic CpG -74300 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chrX-5293 chrX 142090925 142091135 + 6.13 0.000 Intergenic Intergenic 114260 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr2-10638 chr2 15307661 15307871 + 6.13 0.000 intron (NR_052013, intron 40 of 50) intron (NR_052013, intron 40 of 50) 253568 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr20-3927 chr20 32913980 32914190 + 6.13 0.000 intron (NM_001143967, intron 17 of 26) MLT1A0-int|LTR|ERVL-MaLR 55162 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr1-14790 chr1 70963332 70963542 + 6.13 0.000 intron (NM_198716, intron 2 of 3) THE1B-int|LTR|ERVL-MaLR -83069 NR_038420 100132618 Hs.720513 NR_038420 ZRANB2-AS1 - ZRANB2 antisense RNA 1 ncRNA chr6-1959 chr6 132898056 132898266 + 6.13 0.000 Intergenic AluSx1|SINE|Alu 80942 NR_002436 594839 Hs.671378 NR_002436 ENSG00000200534 SNORA33 ACA33 small nucleolar RNA, H/ACA box 33 snoRNA chr8-6659 chr8 79785730 79785940 + 6.13 0.000 intron (NR_125410, intron 3 of 3) L2b|LINE|L2 17693 NR_125410 101927067 Hs.144030 NR_125410 ENSG00000272138 LINC01607 - long intergenic non-protein coding RNA 1607 ncRNA chr7-6791 chr7 25663315 25663525 + 6.13 0.000 promoter-TSS (NR_157831) promoter-TSS (NR_157831) -280 NR_157826 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr2-7466 chr2 14911858 14912068 + 6.13 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 279246 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr1-10726 chr1 195987076 195987286 + 6.13 0.000 Intergenic MLT2B3|LTR|ERVL 101534 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr22-3528 chr22 10964232 10964442 + 6.13 0.000 Intergenic Intergenic -2808 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr9-4910 chr9 8793267 8793477 + 6.13 0.000 intron (NM_002839, intron 11 of 45) MLT1F|LTR|ERVL-MaLR -59426 NM_001171025 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr11-8061 chr11 27822693 27822903 + 6.13 0.000 Intergenic Intergenic -100768 NM_170731 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr2-12630 chr2 72932434 72932644 + 6.13 0.000 intron (NM_004097, intron 2 of 2) intron (NM_004097, intron 2 of 2) 15020 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr13-725 chr13 83271479 83271689 + 6.13 0.000 Intergenic Intergenic 610809 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr5-8222 chr5 108919786 108919996 + 6.13 0.000 intron (NR_146155, intron 10 of 19) MIRb|SINE|MIR -4715 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chrX-4270 chrX 41220280 41220490 + 6.13 0.000 intron (NM_001039591, intron 38 of 44) intron (NM_001039591, intron 38 of 44) -55354 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chrX-3027 chrX 74248723 74248933 + 6.13 0.000 intron (NR_028379, intron 5 of 6) L1MC5a|LINE|L1 -30210 NR_030620 100126317 NR_030620 ENSG00000212027 MIR374B MIRN374B|mir-374b microRNA 374b ncRNA chr1-12202 chr1 202656156 202656366 + 6.13 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) -12808 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr6-7584 chr6 74050927 74051137 + 6.13 0.000 Intergenic L1MCc|LINE|L1 -18419 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr6-7156 chr6 36827839 36828049 + 6.13 0.000 intron (NM_020939, intron 1 of 20) intron (NM_020939, intron 1 of 20) 11500 NM_001314017 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr16-5520 chr16 23376258 23376468 + 6.13 0.000 intron (NM_000336, intron 8 of 12) (GT)n|Simple_repeat|Simple_repeat 74061 NM_000336 6338 Hs.414614 NM_000336 ENSG00000168447 SCNN1B BESC1|ENaCb|ENaCbeta|LIDLS1|SCNEB sodium channel epithelial 1 beta subunit protein-coding chr2-14415 chr2 221748847 221749057 + 6.13 0.000 Intergenic Intergenic -174750 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr8-7181 chr8 124128855 124129065 + 6.13 0.000 intron (NR_103547, intron 1 of 4) L1PA15|LINE|L1 42562 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr14-5122 chr14 89560071 89560281 + 6.13 0.000 intron (NM_001085471, intron 1 of 6) MSTA|LTR|ERVL-MaLR -16040 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA chr9-7297 chr9 9286860 9287070 + 6.13 0.000 intron (NM_002839, intron 9 of 45) AluSz6|SINE|Alu 428947 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr2-7869 chr2 52255412 52255622 + 6.13 0.000 intron (NR_135237, intron 7 of 10) THE1A-int|LTR|ERVL-MaLR -115131 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr1-6545 chr1 29412592 29412802 + 6.13 0.000 Intergenic Intergenic -62583 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr12-6121 chr12 129929774 129929984 + 6.13 0.000 Intergenic Intergenic -25854 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr13-2046 chr13 49817161 49817371 + 6.13 0.000 Intergenic L1MC5a|LINE|L1 -24584 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr22-4004 chr22 39597776 39597986 + 6.13 0.000 intron (NM_001003406, intron 1 of 35) intron (NM_001003406, intron 1 of 35) 27128 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr8-3414 chr8 70010525 70010735 + 6.13 0.000 Intergenic Intergenic 60622 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr12-6055 chr12 112818260 112818470 + 6.13 0.000 intron (NM_001347955, intron 2 of 20) MLT1K|LTR|ERVL-MaLR 26617 NR_145127 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr10-7258 chr10 126031034 126031244 + 6.13 0.000 intron (NM_003474, intron 21 of 22) intron (NM_003474, intron 21 of 22) -57866 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr11-9938 chr11 76246941 76247151 + 6.13 0.000 Intergenic MIRb|SINE|MIR -40544 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr2-13665 chr2 162524066 162524276 + 6.13 0.000 intron (NM_033272, intron 3 of 15) LTR16|LTR|ERVL 179803 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr12-7627 chr12 80017199 80017409 + 6.13 0.000 Intergenic Intergenic -81849 NM_001244990 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr15-4133 chr15 84014594 84014804 + 6.13 0.000 exon (NM_001301110, exon 24 of 30) exon (NM_001301110, exon 24 of 30) -65488 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr14-4515 chr14 38937282 38937492 + 6.13 0.000 Intergenic L1PA16|LINE|L1 -20505 NR_039982 283547 Hs.675941 NR_039982 ENSG00000259070 LINC00639 - long intergenic non-protein coding RNA 639 ncRNA chr2-8307 chr2 105516908 105517118 + 6.13 0.000 Intergenic Intergenic -78500 NM_001318897 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr1-10404 chr1 156958355 156958565 + 6.13 0.000 intron (NM_014784, intron 16 of 39) intron (NM_014784, intron 16 of 39) -22216 NR_030527 768220 NR_030527 ENSG00000211581 MIR765 MIRN765|hsa-mir-765|mir-765 microRNA 765 ncRNA chr1-12770 chr1 75229165 75229375 + 6.13 0.000 intron (NM_001320283, intron 10 of 21) L2a|LINE|L2 94882 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr8-6635 chr8 77830026 77830236 + 6.13 0.000 Intergenic L1PA8A|LINE|L1 379434 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr10-7967 chr10 58107555 58107765 + 6.13 0.000 Intergenic Intergenic 160234 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr13-4389 chr13 109130422 109130632 + 6.13 0.000 intron (NM_015011, intron 31 of 34) intron (NM_015011, intron 31 of 34) 36776 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr22-3990 chr22 38742378 38742588 + 6.13 0.000 exon (NM_001199580, exon 10 of 19) exon (NM_001199580, exon 10 of 19) 12983 NM_001199580 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chrX-3296 chrX 109473161 109473371 + 6.13 0.000 intron (NM_001522, intron 2 of 19) intron (NM_001522, intron 2 of 19) 8820 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr2-10070 chr2 43026511 43026721 + 6.13 0.000 Intergenic Intergenic 12927 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr10-7152 chr10 101755274 101755484 + 6.13 0.000 Intergenic Intergenic 20735 NM_033163 2253 Hs.57710 NM_006119 ENSG00000107831 FGF8 AIGF|FGF-8|HBGF-8|HH6|KAL6 fibroblast growth factor 8 protein-coding chr11-10355 chr11 111126700 111126910 + 6.13 0.000 Intergenic L2a|LINE|L2 -29487 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr1-9187 chr1 21521641 21521851 + 6.13 0.000 intron (NM_001177520, intron 1 of 9) intron (NM_001177520, intron 1 of 9) 12323 NM_000478 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr1-4402 chr1 185813430 185813640 + 6.13 0.000 intron (NM_031935, intron 1 of 106) intron (NM_031935, intron 1 of 106) 79144 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr4-4108 chr4 6427651 6427861 + 6.13 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) -6638 NM_001206996 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr9-7362 chr9 16350334 16350544 + 6.13 0.000 Intergenic Intergenic -74126 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr19-3452 chr19 30089103 30089313 + 6.13 0.000 Intergenic Intergenic 146969 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr1-11459 chr1 89381225 89381435 + 6.13 0.000 intron (NM_198460, intron 6 of 10) intron (NM_198460, intron 6 of 10) 17453 NM_001320257 163351 Hs.254338 NM_198460 ENSG00000183347 GBP6 - guanylate binding protein family member 6 protein-coding chr7-8513 chr7 54196144 54196354 + 6.13 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -134448 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr6-3561 chr6 53670747 53670957 + 6.13 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -5096 NM_001003760 401265 Hs.131064 NM_001003760 ENSG00000124743 KLHL31 BKLHD6|KBTBD1|KLHL|bA345L23.2 kelch like family member 31 protein-coding chr13-3194 chr13 112978527 112978737 + 6.13 0.000 promoter-TSS (NM_001320816) promoter-TSS (NM_001320816) -734 NM_001320816 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr13-4206 chr13 92543456 92543666 + 6.13 0.000 intron (NM_004466, intron 7 of 7) L1M2|LINE|L1 53398 NR_049840 100847092 NR_049840 ENSG00000263741 MIR548AS - microRNA 548as ncRNA chr1-13493 chr1 3923630 3923840 + 6.13 0.000 Intergenic MIR|SINE|MIR -16877 NR_040065 728716 Hs.668359 NR_040065 LINC01346 - long intergenic non-protein coding RNA 1346 ncRNA chr5-7911 chr5 77003817 77004027 + 6.13 0.000 Intergenic AluJo|SINE|Alu -26482 NM_018046 55109 Hs.634849 NM_018046 ENSG00000164252 AGGF1 GPATC7|GPATCH7|HSU84971|HUS84971|VG5Q angiogenic factor with G-patch and FHA domains 1 protein-coding chr12-3992 chr12 22618750 22618960 + 6.13 0.000 intron (NR_135031, intron 1 of 1) MER41A|LTR|ERV1 6191 NR_135031 105369691 Hs.556287 NR_135030 LOC105369691 - uncharacterized LOC105369691 ncRNA chr12-6368 chr12 63523329 63523539 + 6.13 0.000 Intergenic Intergenic 145059 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding chr9-5433 chr9 97044839 97045049 + 6.13 0.000 Intergenic AluJr|SINE|Alu -5301 NM_001201575 1515 Hs.610096 NM_001333 ENSG00000136943 CTSV CATL2|CTSL2|CTSU cathepsin V protein-coding chr6-5313 chr6 143230919 143231129 + 6.13 0.000 intron (NM_001366354, intron 3 of 4) MIRc|SINE|MIR 66242 NM_001366361 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr2-10286 chr2 129587068 129587278 + 6.13 0.000 Intergenic Intergenic 290318 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr9-4755 chr9 132319400 132319610 + 6.13 0.000 intron (NM_001351527, intron 10 of 25) L2a|LINE|L2 35351 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr15-3261 chr15 76136334 76136544 + 6.13 0.000 intron (NM_152335, intron 2 of 10) MIR3|SINE|MIR 45047 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr10-7012 chr10 75707777 75707987 + 6.13 0.000 intron (NR_131178, intron 1 of 7) intron (NR_131178, intron 1 of 7) -4573 NR_132791 105378367 Hs.464836 NR_132791 LOC105378367 - uncharacterized LOC105378367 ncRNA chr1-12757 chr1 70505253 70505463 + 6.13 0.000 Intergenic Intergenic 94090 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr9-7914 chr9 89095762 89095972 + 6.13 0.000 intron (NM_016848, intron 2 of 11) intron (NM_016848, intron 2 of 11) 82951 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr15-4421 chr15 44918024 44918234 + 6.13 0.000 Intergenic MER20|DNA|hAT-Charlie -33435 NR_146394 653381 Hs.878 NR_146393 ENSG00000259479 SORD2P SORD2 sorbitol dehydrogenase 2, pseudogene pseudo chr7-9286 chr7 125922670 125922880 + 6.13 0.000 Intergenic HERVH-int|LTR|ERV1 -658484 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr17-6751 chr17 82823111 82823321 + 6.13 0.000 intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) 16806 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr5-5249 chr5 119470882 119471092 + 6.13 0.000 intron (NM_000414, intron 2 of 23) intron (NM_000414, intron 2 of 23) 18490 NM_001199291 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr10-5848 chr10 113745270 113745480 + 6.13 0.000 Intergenic Intergenic -6307 NM_001193435 79949 Hs.228320 NM_024889 ENSG00000148735 PLEKHS1 C10orf81|HEL185 pleckstrin homology domain containing S1 protein-coding chr22-2426 chr22 19422931 19423141 + 6.13 0.000 intron (NM_003325, intron 1 of 24) LTR16|LTR|ERVL 8697 NM_003325 7290 Hs.474206 NM_003325 ENSG00000100084 HIRA DGCR1|TUP1|TUPLE1 histone cell cycle regulator protein-coding chr7-6506 chr7 19650929 19651139 + 6.13 0.000 Intergenic L1PREC2|LINE|L1 54402 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr7-9229 chr7 120021390 120021600 + 6.13 0.000 Intergenic Intergenic -114120 NR_131961 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr21-1579 chr21 15022570 15022780 + 6.13 0.000 intron (NM_003489, intron 2 of 3) intron (NM_003489, intron 2 of 3) 42325 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr14-3540 chr14 104427492 104427702 + 6.13 0.000 Intergenic Intergenic -152167 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr20-4039 chr20 37120563 37120773 + 6.13 0.000 intron (NM_152503, intron 16 of 24) intron (NM_152503, intron 16 of 24) -24671 NM_001323281 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr13-3179 chr13 110109892 110110102 + 6.13 0.000 Intergenic Intergenic -11705 NR_148221 105370361 Hs.134728 NR_148221 LOC105370361 - uncharacterized LOC105370361 ncRNA chr10-4469 chr10 78436653 78436863 + 6.13 0.000 Intergenic Intergenic 169416 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr20-2442 chr20 24739549 24739759 + 6.13 0.000 Intergenic Intergenic -209615 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr17-4454 chr17 52217619 52217829 + 6.13 0.000 Intergenic AluSz|SINE|Alu -57707 NM_001082534 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr17-6491 chr17 27489076 27489286 + 6.13 0.000 intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 17217 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr2-12698 chr2 77180282 77180492 + 6.13 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) 194422 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr10-8220 chr10 73227990 73228200 + 6.13 0.000 exon (NM_173348, exon 8 of 14) exon (NM_173348, exon 8 of 14) 19160 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding chr14-5159 chr14 91305353 91305563 + 6.13 0.000 intron (NM_001080414, intron 19 of 29) MER103C|DNA|hAT-Charlie -51578 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr5-7207 chr5 7796666 7796876 + 6.13 0.000 intron (NM_020546, intron 20 of 24) intron (NM_020546, intron 20 of 24) 54362 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding chr4-8640 chr4 174740981 174741191 + 6.13 0.000 intron (NM_006529, intron 3 of 9) L1ME1|LINE|L1 88161 NM_006529 8001 Hs.413099 NM_006529 ENSG00000145451 GLRA3 - glycine receptor alpha 3 protein-coding chr2-10297 chr2 133168144 133168354 + 6.13 0.000 intron (NM_207481, intron 5 of 17) intron (NM_207481, intron 5 of 17) -97946 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr20-4402 chr20 58800592 58800802 + 6.13 0.000 Intergenic Intergenic 16997 NR_029844 407022 NR_029844 ENSG00000284040 MIR296 MIRN296|miRNA296|mir-296 microRNA 296 ncRNA chrX-3431 chrX 18199673 18199883 + 6.13 0.000 intron (NM_153346, intron 6 of 13) L1MDa|LINE|L1 21108 NM_153346 139105 Hs.403802 NM_153346 ENSG00000177324 BEND2 CXorf20 BEN domain containing 2 protein-coding chr6-8539 chr6 161145814 161146024 + 6.13 0.000 intron (NM_020133, intron 7 of 8) intron (NM_020133, intron 7 of 8) 16063 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr11-6982 chr11 116276513 116276723 + 6.13 0.000 Intergenic Intergenic -362804 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr1-10669 chr1 184684662 184684872 + 6.13 0.000 Intergenic Intergenic 70091 NR_135118 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr11-6665 chr11 76215481 76215691 + 6.13 0.000 Intergenic Intergenic -9084 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr15-3330 chr15 80331903 80332113 + 6.13 0.000 intron (NR_033833, intron 1 of 2) intron (NR_033833, intron 1 of 2) 9797 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA chr3-9591 chr3 56167575 56167785 + 6.13 0.000 intron (NR_132749, intron 4 of 17) intron (NR_132749, intron 4 of 17) 300787 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr1-10746 chr1 198930244 198930454 + 6.13 0.000 intron (NR_040073, intron 1 of 2) intron (NR_040073, intron 1 of 2) 7080 NR_040073 100131234 Hs.711077 NR_040073 MIR181A1HG - MIR181A1 host gene ncRNA chr17-4219 chr17 39617632 39617842 + 6.13 0.000 Intergenic CpG -9215 NM_032192 84152 Hs.286192 NM_032192 ENSG00000131771 PPP1R1B DARPP-32|DARPP32 protein phosphatase 1 regulatory inhibitor subunit 1B protein-coding chr7-6363 chr7 150788388 150788598 + 6.13 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 11871 NM_001101312 28959 Hs.647090 NM_014020 ENSG00000106565 TMEM176B LR8|MS4B2 transmembrane protein 176B protein-coding chr9-4430 chr9 14517688 14517898 + 6.13 0.000 intron (NM_001369458, intron 1 of 11) intron (NM_001369458, intron 1 of 11) 14284 NM_001369458 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr3-9562 chr3 53667017 53667227 + 6.13 0.000 intron (NM_000720, intron 7 of 48) intron (NM_000720, intron 7 of 48) 172511 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr20-1454 chr20 62036670 62036880 + 6.13 0.000 intron (NM_003185, intron 1 of 14) L1MD|LINE|L1 -28027 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr6-7944 chr6 111160610 111160820 + 6.13 0.000 intron (NM_018593, intron 1 of 5) LTR27C|LTR|ERV1 46881 NR_145796 109623478 NR_145796 SNORD166 - small nucleolar RNA, C/D box 166 snoRNA chrX-2151 chrX 35561305 35561515 + 6.13 0.000 Intergenic L1P4e|LINE|L1 -236932 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr5-7943 chr5 79857077 79857287 + 6.13 0.000 Intergenic AluSx1|SINE|Alu -79397 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr22-3828 chr22 31337311 31337521 + 6.13 0.000 intron (NM_032050, intron 2 of 3) intron (NM_032050, intron 2 of 3) 2067 NR_110542 101929760 Hs.661718 NR_110542 ENSG00000228839 PIK3IP1-AS1 - PIK3IP1 antisense RNA 1 (head to head) ncRNA chr14-4738 chr14 61461977 61462187 + 6.13 0.000 intron (NM_006255, intron 9 of 13) intron (NM_006255, intron 9 of 13) 108112 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr1-16469 chr1 228220873 228221083 + 6.13 0.000 intron (NM_001271223, intron 9 of 115) LTR78|LTR|ERV1 -7314 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr7-4236 chr7 1209059 1209269 + 6.13 0.000 Intergenic AluJo|SINE|Alu -23708 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr8-6798 chr8 95455478 95455688 + 6.13 0.000 intron (NR_038207, intron 2 of 2) L1MEj|LINE|L1 -186382 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr8-6984 chr8 107968223 107968433 + 6.13 0.000 intron (NM_001282863, intron 2 of 4) L1MA4|LINE|L1 113611 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr1-9441 chr1 34383066 34383276 + 6.13 0.000 Intergenic L1MCa|LINE|L1 206264 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr10-7813 chr10 42932465 42932675 + 6.13 0.000 Intergenic Intergenic 48937 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr2-11872 chr2 23017027 23017237 + 6.13 0.000 Intergenic Intergenic -368047 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2-13364 chr2 136258318 136258528 + 6.13 0.000 Intergenic MER5B|DNA|hAT-Charlie -140268 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr2-7394 chr2 8003704 8003914 + 6.13 0.000 Intergenic Intergenic -26995 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr3-10850 chr3 166825079 166825289 + 6.13 0.000 Intergenic HERVH-int|LTR|ERV1 -73499 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr20-2867 chr20 62543067 62543277 + 6.13 0.000 non-coding (NR_033263, exon 7 of 7) non-coding (NR_033263, exon 7 of 7) -7281 NM_178463 128826 Hs.86507 NM_178463 MIR1-1HG C20orf166|MIR133A2HG MIR1-1 host gene protein-coding chr2-9421 chr2 232367291 232367501 + 6.13 0.000 Intergenic Intergenic -11355 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr1-10933 chr1 211483645 211483855 + 6.13 0.000 intron (NM_183059, intron 1 of 2) intron (NM_183059, intron 1 of 2) 9167 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr20-4228 chr20 47909188 47909398 + 6.13 0.000 Intergenic Intergenic -73933 NR_109942 101060004 Hs.129970 NR_109942 LINC01523 - long intergenic non-protein coding RNA 1523 ncRNA chr21-1022 chr21 21101968 21102178 + 6.13 0.000 intron (NM_001352595, intron 1 of 14) MLT1I|LTR|ERVL-MaLR -45089 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr7-4141 chr7 75616065 75616275 + 6.13 0.000 intron (NM_005338, intron 1 of 30) L3b|LINE|CR1 -88047 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr21-1145 chr21 39591490 39591700 + 6.13 0.000 Intergenic L1PA13|LINE|L1 21227 NR_026543 114041 Hs.375120 NM_153754 ENSG00000184809 B3GALT5-AS1 C21orf88 B3GALT5 antisense RNA 1 ncRNA chr18-2187 chr18 60241945 60242155 + 6.13 0.000 Intergenic L1PREC2|LINE|L1 130725 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr10-5555 chr10 88116066 88116276 + 6.13 0.000 Intergenic Intergenic 252546 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr5-6172 chr5 57043312 57043522 + 6.13 0.000 Intergenic Intergenic -91287 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr14-3798 chr14 63922606 63922816 + 6.13 0.000 intron (NM_015180, intron 2 of 114) intron (NM_015180, intron 2 of 114) 69707 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr17-4337 chr17 3259814 3260024 + 6.13 0.000 Intergenic Intergenic 19055 NM_002551 4995 Hs.647414 NM_002551 ENSG00000221882 OR3A2 OLFRA04|OR17-14|OR17-228|OR228 olfactory receptor family 3 subfamily A member 2 protein-coding chr1-15289 chr1 116273607 116273817 + 6.13 0.000 Intergenic Intergenic -99532 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr10-4829 chr10 12868550 12868760 + 6.13 0.000 Intergenic Intergenic 133058 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr10-6191 chr10 25390676 25390886 + 6.13 0.000 intron (NM_020752, intron 2 of 10) THE1B-int|LTR|ERVL-MaLR -214505 NR_027333 100128811 Hs.700407 NR_027333 ENSG00000233642 GPR158-AS1 - GPR158 antisense RNA 1 ncRNA chr14-3660 chr14 84684750 84684960 + 6.13 0.000 Intergenic L1P4|LINE|L1 -587077 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr5-8899 chr5 156052031 156052241 + 6.13 0.000 Intergenic MER61A|LTR|ERV1 -274621 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr7-7715 chr7 407680 407890 + 6.13 0.000 Intergenic Intergenic 28360 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr4-7750 chr4 93521910 93522120 + 6.13 0.000 intron (NM_001286838, intron 12 of 14) L2a|LINE|L2 -306738 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr18-3307 chr18 54690184 54690394 + 6.13 0.000 Intergenic Intergenic 99130 NM_173629 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr8-1977 chr8 76272836 76273046 + 6.13 0.000 Intergenic L1MB2|LINE|L1 -133713 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr12-7688 chr12 89346075 89346285 + 6.13 0.000 Intergenic Intergenic 6321 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr8-5844 chr8 6361405 6361615 + 6.13 0.000 Intergenic Intergenic 45038 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr8-6440 chr8 60725720 60725930 + 6.13 0.000 intron (NM_017780, intron 1 of 37) intron (NM_017780, intron 1 of 37) -15434 NM_001316690 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr6-7507 chr6 63980253 63980463 + 6.13 0.000 intron (NM_001292009, intron 35 of 43) intron (NM_001292009, intron 35 of 43) 173522 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chrX-2662 chrX 115067630 115067840 + 6.13 0.000 Intergenic Intergenic -50119 NM_000640 3598 Hs.336046 NM_000640 ENSG00000123496 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor subunit alpha 2 protein-coding chr4-7546 chr4 77197855 77198065 + 6.13 0.000 Intergenic Intergenic 40753 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr1-16699 chr1 246292255 246292465 + 6.13 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 125052 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr20-4120 chr20 42078456 42078666 + 6.13 0.000 3' UTR (NM_007050, exon 31 of 31) 3' UTR (NM_007050, exon 31 of 31) -460184 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr4-4989 chr4 135474080 135474290 + 6.13 0.000 Intergenic L1PA3|LINE|L1 -350626 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr18-2787 chr18 2968145 2968355 + 6.13 0.000 intron (NM_014646, intron 1 of 19) L4_C_Mam|LINE|RTE-X -21627 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo chr6-5120 chr6 120813617 120813827 + 6.13 0.000 Intergenic L1P3|LINE|L1 520758 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr5-4347 chr5 167559833 167560043 + 6.13 0.000 intron (NM_001122679, intron 3 of 29) intron (NM_001122679, intron 3 of 29) -13721 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr7-7243 chr7 27093697 27093907 + 6.13 0.000 3' UTR (NM_153620, exon 3 of 3) 3' UTR (NM_153620, exon 3 of 3) 2198 NM_153620 3198 Hs.67397 NM_005522 ENSG00000105991 HOXA1 BSAS|HOX1|HOX1F homeobox A1 protein-coding chr1-12714 chr1 54554599 54554809 + 6.13 0.000 intron (NM_015547, intron 1 of 16) L1MA8|LINE|L1 6476 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr7-4342 chr7 45510642 45510852 + 6.13 0.000 Intergenic Intergenic -63393 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr10-5328 chr10 71292185 71292395 + 6.13 0.000 intron (NM_001244889, intron 9 of 15) intron (NM_001244889, intron 9 of 15) -26963 NM_001363518 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr18-3201 chr18 46333867 46334077 + 6.13 0.000 promoter-TSS (NR_046357) promoter-TSS (NR_046357) -46 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr4-7582 chr4 80154403 80154613 + 6.13 0.000 Intergenic Intergenic -30762 NM_020226 56978 Hs.373642 NM_020226 ENSG00000152784 PRDM8 EPM10|KMT8D|PFM5 PR/SET domain 8 protein-coding chr15-5153 chr15 91513047 91513257 + 6.13 0.000 Intergenic MER102a|DNA|hAT-Charlie 49813 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr2-8764 chr2 163934253 163934463 + 6.13 0.000 Intergenic L2c|LINE|L2 -198350 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr10-8931 chr10 116524834 116525044 + 6.13 0.000 Intergenic Intergenic -20992 NM_000936 5406 Hs.501135 NM_000936 ENSG00000175535 PNLIP PL|PNLIPD|PTL pancreatic lipase protein-coding chr5-7462 chr5 32588226 32588436 + 6.13 0.000 intron (NM_006713, intron 1 of 4) intron (NM_006713, intron 1 of 4) 2774 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr16-6665 chr16 69556369 69556579 + 6.13 0.000 Intergenic Intergenic 9394 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr8-6802 chr8 95763286 95763496 + 6.13 0.000 intron (NR_038205, intron 2 of 2) L3|LINE|CR1 184957 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chrX-2104 chrX 24665181 24665391 + 6.13 0.000 intron (NM_001163264, intron 1 of 7) AluSx|SINE|Alu 7601 NM_001163264 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr20-4037 chr20 37082239 37082449 + 6.13 0.000 intron (NM_002895, intron 2 of 21) L1MB3|LINE|L1 13653 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr1-12360 chr1 3119006 3119216 + 6.13 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) -8864 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr7-9091 chr7 105785503 105785713 + 6.13 0.000 intron (NM_152749, intron 3 of 3) intron (NM_152749, intron 3 of 3) 90977 NM_152749 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr16-6191 chr16 26845692 26845902 + 6.13 0.000 Intergenic Intergenic -221130 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr15-4457 chr15 47582624 47582834 + 6.13 0.000 intron (NM_001198999, intron 3 of 19) intron (NM_001198999, intron 3 of 19) -134776 NM_001358352 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chrX-4245 chrX 39213448 39213658 + 6.13 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 113809 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr15-3796 chr15 70569215 70569425 + 6.13 0.000 Intergenic MER68|LTR|ERVL 17286 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA chrX-3576 chrX 74114500 74114710 + 6.13 0.000 intron (NR_028379, intron 5 of 6) L1MA10|LINE|L1 103856 NR_030398 693122 NR_030398 ENSG00000202566 MIR421 MIRN421|hsa-mir-421 microRNA 421 ncRNA chr8-6711 chr8 85146301 85146511 + 6.13 0.000 TTS (NM_001349638) TTS (NM_001349638) 30635 NR_134311 102723322 Hs.535913 NR_134311 ENSG00000260493 LOC102723322 - uncharacterized LOC102723322 ncRNA chr11-4610 chr11 4148141 4148351 + 6.13 0.000 Intergenic Intergenic 32168 NM_001330193 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr3-8827 chr3 8338870 8339080 + 6.13 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 162683 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr1-14814 chr1 72625458 72625668 + 6.13 0.000 Intergenic Intergenic -343024 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr14-2813 chr14 22882617 22882827 + 6.13 0.000 promoter-TSS (NM_173527) promoter-TSS (NM_173527) -500 NM_173527 161253 Hs.444911 NM_173527 ENSG00000139890 REM2 - RRAD and GEM like GTPase 2 protein-coding chr6-7405 chr6 52082630 52082840 + 6.13 0.000 intron (NM_138694, intron 3 of 66) intron (NM_138694, intron 3 of 66) 4878 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding chr20-3548 chr20 1985421 1985631 + 6.13 0.000 intron (NM_001190899, intron 1 of 2) MIRb|SINE|MIR 7280 NM_001190892 5173 Hs.22584 NM_024411 ENSG00000101327 PDYN ADCA|PENKB|SCA23 prodynorphin protein-coding chr12-7479 chr12 65729137 65729347 + 6.13 0.000 Intergenic CpG -86870 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr8-5275 chr8 139688194 139688404 + 6.13 0.000 intron (NR_104210, intron 1 of 3) THE1D|LTR|ERVL-MaLR 14824 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr6-5646 chr6 75418333 75418543 + 6.13 0.000 intron (NR_125859, intron 4 of 8) intron (NR_125859, intron 4 of 8) -9969 NR_039670 100616389 NR_039670 ENSG00000263533 MIR4463 - microRNA 4463 ncRNA chr7-7903 chr7 6620209 6620419 + 6.13 0.000 intron (NM_001353546, intron 2 of 2) intron (NM_001353546, intron 2 of 2) 4704 NM_001353546 54753 Hs.592170 NM_017560 ENSG00000236609 ZNF853 - zinc finger protein 853 protein-coding chr4-7418 chr4 65794513 65794723 + 6.13 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -124123 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr10-4940 chr10 26049451 26049661 + 6.13 0.000 intron (NM_017433, intron 10 of 34) L2|LINE|L2 115327 NM_017433 53904 Hs.662630 NM_017433 ENSG00000095777 MYO3A DFNB30 myosin IIIA protein-coding chr3-7174 chr3 187159616 187159826 + 6.13 0.000 Intergenic Intergenic -20225 NM_052969 116832 Hs.647900 NM_052969 ENSG00000163923 RPL39L L39-2|RPL39L1 ribosomal protein L39 like protein-coding chr1-15941 chr1 188027709 188027919 + 6.13 0.000 Intergenic L2a|LINE|L2 584186 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr6-7847 chr6 105078928 105079138 + 6.13 0.000 3' UTR (NM_001004317, exon 4 of 4) 3' UTR (NM_001004317, exon 4 of 4) 57313 NM_147147 11149 Hs.221660 NM_007073 ENSG00000112276 BVES CARICK|HBVES|LGMD2X|LGMDR25|POP1|POPDC1 blood vessel epicardial substance protein-coding chr15-2641 chr15 71303268 71303478 + 6.13 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -114314 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr4-3544 chr4 168958070 168958280 + 6.13 0.000 Intergenic AluSx1|SINE|Alu 52080 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr12-3957 chr12 8508562 8508772 + 6.13 0.000 Intergenic L1PREC2|LINE|L1 -4836 NM_080387 338339 Hs.351811 NM_080387 ENSG00000166527 CLEC4D CD368|CLEC-6|CLEC6|CLECSF8|Dectin-3|MCL|MPCL C-type lectin domain family 4 member D protein-coding chr5-7018 chr5 157787692 157787902 + 6.13 0.000 exon (NM_001195555, exon 12 of 12) exon (NM_001195555, exon 12 of 12) 44085 NM_173491 134353 Hs.23648 NM_173491 ENSG00000155858 LSM11 - LSM11, U7 small nuclear RNA associated protein-coding chr8-6299 chr8 42975649 42975859 + 6.13 0.000 intron (NM_032410, intron 13 of 21) AluSc8|SINE|Alu 78776 NM_032410 84376 Hs.162852 NM_032410 ENSG00000168172 HOOK3 HK3 hook microtubule tethering protein 3 protein-coding chr1-5474 chr1 107851047 107851257 + 6.13 0.000 intron (NM_006113, intron 2 of 26) AluYk12|SINE|Alu -46071 NR_107006 102465839 NR_107006 ENSG00000275455 MIR7852 hsa-mir-7852 microRNA 7852 ncRNA chr7-8255 chr7 36165085 36165295 + 6.13 0.000 intron (NM_030636, intron 2 of 7) Tigger3b|DNA|TcMar-Tigger 11936 NM_030636 80820 Hs.487994 NM_030636 ENSG00000122547 EEPD1 HSPC107 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding chr22-1886 chr22 44313689 44313899 + 6.13 0.000 promoter-TSS (NM_001099294) promoter-TSS (NM_001099294) -843 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chrX-2634 chrX 110249056 110249266 + 6.13 0.000 intron (NM_001025580, intron 1 of 4) intron (NM_001025580, intron 1 of 4) -24101 NR_004379 692226 NR_004379 ENSG00000208883 SNORD96B U96b small nucleolar RNA, C/D box 96B snoRNA chr21-1650 chr21 25414959 25415169 + 6.13 0.000 intron (NR_024027, intron 4 of 4) MSTB|LTR|ERVL-MaLR 16637 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA chr4-6953 chr4 18956009 18956219 + 6.13 0.000 Intergenic Intergenic -934239 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr6-7019 chr6 23321381 23321591 + 6.13 0.000 Intergenic L2c|LINE|L2 -603562 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr19-6758 chr19 39489589 39489799 + 6.13 0.000 intron (NM_001001563, intron 10 of 10) intron (NM_001001563, intron 10 of 10) 8856 NM_001329559 92609 Hs.590956 NM_001001563 ENSG00000105197 TIMM50 MGCA9|TIM50|TIM50L translocase of inner mitochondrial membrane 50 protein-coding chr3-6343 chr3 81959427 81959637 + 6.13 0.000 Intergenic Intergenic -26610 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr20-3417 chr20 43925861 43926071 + 6.13 0.000 intron (NM_001098796, intron 1 of 8) intron (NM_001098796, intron 1 of 8) 9836 NM_032883 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr9-7429 chr9 23601809 23602019 + 6.13 0.000 intron (NR_121602, intron 11 of 27) MamRep605|LTR?|LTR? 70485 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr4-8628 chr4 173771044 173771254 + 6.13 0.000 Intergenic Intergenic -126124 NR_146487 101928478 NR_146487 ENSG00000250708 LINC02269 - long intergenic non-protein coding RNA 2269 ncRNA chr1-13631 chr1 10232395 10232605 + 6.13 0.000 intron (NM_001365953, intron 2 of 20) intron (NM_001365953, intron 2 of 20) 1736 NM_001365953 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr1-13202 chr1 208392070 208392280 + 6.13 0.000 Intergenic Intergenic -147791 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr2-8817 chr2 169427316 169427526 + 6.13 0.000 Intergenic Intergenic -52073 NM_152384 129880 Hs.233398 NM_152384 ENSG00000163093 BBS5 - Bardet-Biedl syndrome 5 protein-coding chr19-6119 chr19 3831499 3831709 + 6.13 0.000 intron (NM_015174, intron 4 of 18) CpG -29805 NM_002378 4145 Hs.631845 NM_002378 ENSG00000007264 MATK CHK|CTK|HHYLTK|HYL|HYLTK|Lsk megakaryocyte-associated tyrosine kinase protein-coding chr17-7908 chr17 43954920 43955130 + 6.13 0.000 intron (NM_004160, intron 3 of 6) intron (NM_004160, intron 3 of 6) -12549 NM_002722 5539 Hs.558368 NM_002722 ENSG00000108849 PPY PNP|PP pancreatic polypeptide protein-coding chr4-5086 chr4 147009486 147009696 + 6.13 0.000 Intergenic Intergenic -63705 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chrX-2986 chrX 38177916 38178126 + 6.13 0.000 intron (NM_001170750, intron 1 of 8) intron (NM_001170750, intron 1 of 8) 42850 NM_006307 8406 Hs.15154 NM_006307 ENSG00000101955 SRPX DRS|ETX1|HEL-S-83p|SRPX1 sushi repeat containing protein X-linked protein-coding chr18-2263 chr18 73662247 73662457 + 6.13 0.000 Intergenic Intergenic 337411 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr4-5685 chr4 22757094 22757304 + 6.13 0.000 intron (NR_102357, intron 4 of 4) Helitron3Na_Mam|RC|Helitron 43110 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr2-10327 chr2 152443900 152444110 + 6.13 0.000 intron (NM_052905, intron 1 of 25) L2b|LINE|L2 108831 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr6-6862 chr6 10086470 10086680 + 6.13 0.000 Intergenic Intergenic -317927 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr6-6768 chr6 3534874 3535084 + 6.13 0.000 Intergenic L2|LINE|L2 -78420 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr4-7486 chr4 72130636 72130846 + 6.13 0.000 intron (NM_053036, intron 2 of 3) LTR1E|LTR|ERV1 91609 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr5-5417 chr5 136373762 136373972 + 6.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -8391 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr9-4919 chr9 10806423 10806633 + 6.13 0.000 Intergenic AluJo|SINE|Alu 193322 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr12-4596 chr12 32896540 32896750 + 6.13 0.000 exon (NM_004572, exon 1 of 14) exon (NM_004572, exon 1 of 14) 201 NM_004572 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr8-6542 chr8 68843140 68843350 + 6.13 0.000 Intergenic Intergenic 260945 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr12-6690 chr12 3673641 3673851 + 6.13 0.000 intron (NM_001144958, intron 6 of 19) MIRb|SINE|MIR 79363 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr18-3289 chr18 53186557 53186767 + 6.13 0.000 intron (NM_005215, intron 9 of 28) L2a|LINE|L2 -50439 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr10-7832 chr10 44356382 44356592 + 6.13 0.000 Intergenic Intergenic 28610 NM_001033886 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr5-6822 chr5 104779095 104779305 + 6.13 0.000 Intergenic Intergenic -320274 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr20-4518 chr20 63604672 63604882 + 6.13 0.000 exon (NM_012384, exon 3 of 10) exon (NM_012384, exon 3 of 10) 22324 NM_012384 26205 Hs.473286 NM_012384 ENSG00000101216 GMEB2 GMEB-2|P79PIF|PIF79 glucocorticoid modulatory element binding protein 2 protein-coding chr1-15637 chr1 162969759 162969969 + 6.13 0.000 Intergenic Intergenic -98742 NM_001102445 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G protein signaling 4 protein-coding chr10-7746 chr10 32852019 32852229 + 6.13 0.000 intron (NM_001321115, intron 41 of 43) intron (NM_001321115, intron 41 of 43) 49348 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr7-7119 chr7 1704612 1704822 + 6.13 0.000 intron (NM_001128636, intron 1 of 2) intron (NM_001128636, intron 1 of 2) 16598 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr12-5371 chr12 119816681 119816891 + 6.13 0.000 intron (NM_007174, intron 9 of 46) intron (NM_007174, intron 9 of 46) 60534 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr6-4919 chr6 97661569 97661779 + 6.13 0.000 intron (NR_110757, intron 3 of 4) L2c|LINE|L2 356088 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr7-4923 chr7 132217742 132217952 + 6.13 0.000 intron (NM_020911, intron 9 of 31) intron (NM_020911, intron 9 of 31) -43014 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr7-8647 chr7 70673681 70673891 + 6.13 0.000 intron (NM_015570, intron 5 of 18) L2c|LINE|L2 -458358 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr9-7545 chr9 34917152 34917362 + 6.13 0.000 Intergenic Intergenic -21493 NM_001309426 100129969 Hs.571602 NM_001309426 ENSG00000187791 FAM205C FAM205CP family with sequence similarity 205 member C protein-coding chr1-12464 chr1 17516689 17516899 + 6.13 0.000 Intergenic Intergenic -22904 NR_137288 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr15-3177 chr15 69668328 69668538 + 6.13 0.000 intron (NR_126437, intron 3 of 5) intron (NR_126437, intron 3 of 5) 76233 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr1-16328 chr1 217647923 217648133 + 6.13 0.000 intron (NM_138796, intron 1 of 10) intron (NM_138796, intron 1 of 10) 16684 NM_138796 128153 Hs.171130 NM_138796 ENSG00000162814 SPATA17 IQCH|MSRG-11|MSRG11 spermatogenesis associated 17 protein-coding chr2-13427 chr2 142537600 142537810 + 6.13 0.000 Intergenic Intergenic -339959 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr15-2500 chr15 26826662 26826872 + 6.13 0.000 Intergenic AluSx|SINE|Alu -40295 NM_000810 2558 Hs.24969 NM_000810 ENSG00000186297 GABRA5 - gamma-aminobutyric acid type A receptor alpha5 subunit protein-coding chr8-4366 chr8 101842587 101842797 + 6.13 0.000 intron (NM_001040628, intron 4 of 7) MLT1L|LTR|ERVL-MaLR -51723 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr19-3599 chr19 50447146 50447356 + 6.13 0.000 intron (NM_004533, intron 12 of 27) L1MC4a|LINE|L1 14359 NM_004533 4606 Hs.85937 NM_004533 ENSG00000086967 MYBPC2 MYBPC|MYBPCF myosin binding protein C, fast type protein-coding chr3-5869 chr3 35505356 35505566 + 6.13 0.000 Intergenic L1PA10|LINE|L1 -111438 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr11-6194 chr11 45636087 45636297 + 6.13 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 29430 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr12-5262 chr12 109657371 109657581 + 6.13 0.000 Intergenic L2a|LINE|L2 -56349 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr22-3798 chr22 29853516 29853726 + 6.13 0.000 Intergenic MIRb|SINE|MIR -15347 NM_001369922 84164 Hs.731754 NM_032204 ENSG00000100325 ASCC2 ASC1p100|p100 activating signal cointegrator 1 complex subunit 2 protein-coding chr5-5884 chr5 14288486 14288696 + 6.13 0.000 intron (NM_007118, intron 4 of 56) AluY|SINE|Alu 145249 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr7-7002 chr7 120439886 120440096 + 6.13 0.000 intron (NM_012281, intron 1 of 5) L1MA5|LINE|L1 166816 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr1-9860 chr1 65192105 65192315 + 6.13 0.000 intron (NM_001005353, intron 3 of 5) MSTD|LTR|ERVL-MaLR 43216 NM_001330616 205 Hs.10862 NM_013410 ENSG00000162433 AK4 AK 4|AK3|AK3L1|AK3L2 adenylate kinase 4 protein-coding chr17-5608 chr17 48470802 48471012 + 6.13 0.000 Intergenic MIRc|SINE|MIR 26074 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 - uncharacterized LOC101927166 ncRNA chr7-4843 chr7 102458721 102458931 + 6.13 0.000 intron (NM_017621, intron 2 of 2) L1M4|LINE|L1 6037 NM_017621 54784 Hs.658598 NM_017621 ENSG00000160993 ALKBH4 ABH4 alkB homolog 4, lysine demethylase protein-coding chr1-11635 chr1 244237150 244237360 + 6.13 0.000 Intergenic AluJb|SINE|Alu -115380 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr17-4196 chr17 20936999 20937209 + 6.13 0.000 Intergenic Intergenic -1462 NR_160722 339260 Hs.661076 NR_123730 ENSG00000233098 LOC339260 - uncharacterized LOC339260 ncRNA chr13-3257 chr13 36484219 36484429 + 6.13 0.000 Intergenic L1MA4|LINE|L1 51829 NM_003914 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr20-1678 chr20 34340127 34340337 + 6.13 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -23041 NM_001324198 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr2-13161 chr2 119703067 119703277 + 6.13 0.000 intron (NR_148341, intron 12 of 16) intron (NR_148341, intron 12 of 16) 23971 NR_148341 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr1-13712 chr1 15108712 15108922 + 6.13 0.000 intron (NM_201628, intron 13 of 14) intron (NM_201628, intron 13 of 14) 43647 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr6-4635 chr6 47373958 47374168 + 6.13 0.000 Intergenic L1MA8|LINE|L1 -64158 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr13-3883 chr13 51886460 51886670 + 6.13 0.000 Intergenic MIR|SINE|MIR 24596 NM_001346075 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr7-7806 chr7 2324006 2324216 + 6.13 0.000 Intergenic AluSx|SINE|Alu -9670 NM_013321 29886 Hs.584900 NM_013321 ENSG00000106266 SNX8 Mvp1 sorting nexin 8 protein-coding chr11-7194 chr11 131527406 131527616 + 6.13 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 13356 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr1-16012 chr1 198329201 198329411 + 6.13 0.000 Intergenic AluSx|SINE|Alu 172308 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr11-10312 chr11 108416379 108416589 + 6.13 0.000 intron (NM_001351110, intron 2 of 8) AluSz|SINE|Alu 51045 NM_001351110 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr11-8062 chr11 28107440 28107650 + 6.13 0.000 promoter-TSS (NM_001297775) promoter-TSS (NM_001297775) 611 NM_031217 81930 Hs.301052 NM_031217 ENSG00000121621 KIF18A MS-KIF18A|PPP1R99 kinesin family member 18A protein-coding chr2-12036 chr2 29567176 29567386 + 6.13 0.000 intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -91904 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr3-4331 chr3 177770749 177770959 + 6.13 0.000 Intergenic Intergenic -46011 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr10-7044 chr10 81009428 81009638 + 6.13 0.000 Intergenic Intergenic 359736 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr11-8919 chr11 17047091 17047301 + 6.13 0.000 Intergenic Intergenic -4690 NR_045002 10819 Hs.523504 NR_045002 ENSG00000184669 OR7E14P OR11-5|OR7E151P olfactory receptor family 7 subfamily E member 14 pseudogene pseudo chr8-5590 chr8 91953709 91953919 + 6.13 0.000 Intergenic AluJr|SINE|Alu 63866 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr18-2645 chr18 43982741 43982951 + 6.13 0.000 Intergenic MLT1M|LTR|ERVL-MaLR 548851 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr12-7400 chr12 57578475 57578685 + 6.13 0.000 intron (NM_004984, intron 23 of 28) intron (NM_004984, intron 23 of 28) -12612 NM_001146260 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr11-8720 chr11 7115895 7116105 + 6.13 0.000 Intergenic HAL1ME|LINE|L1 27002 NM_014469 27288 Hs.121605 NM_014469 ENSG00000170748 RBMXL2 HNRNPG-T|HNRNPGT|HNRPGT RBMX like 2 protein-coding chr22-3035 chr22 30547478 30547688 + 6.13 0.000 promoter-TSS (NM_001193336) promoter-TSS (NM_001193336) -901 NM_001193336 730005 Hs.505605 NM_001193336 ENSG00000214491 SEC14L6 - SEC14 like lipid binding 6 protein-coding chr2-10998 chr2 100381223 100381433 + 6.13 0.000 Intergenic Intergenic 36340 NM_004854 9486 Hs.516370 NM_004854 ENSG00000115526 CHST10 HNK-1ST|HNK1ST carbohydrate sulfotransferase 10 protein-coding chr3-9403 chr3 48302787 48302997 + 6.13 0.000 Intergenic Intergenic -1207 NM_001308431 10201 Hs.465558 NM_005793 ENSG00000172113 NME6 IPIA-ALPHA|NDK 6|NM23-H6 NME/NM23 nucleoside diphosphate kinase 6 protein-coding chr14-3826 chr14 73038558 73038768 + 6.13 0.000 Intergenic AluSz6|SINE|Alu -11557 NM_021260 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr9-4619 chr9 109418936 109419146 + 6.13 0.000 intron (NM_001145368, intron 13 of 24) intron (NM_001145368, intron 13 of 24) -1258 NR_026918 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chr7-8511 chr7 54026166 54026376 + 6.13 0.000 Intergenic L1PB1|LINE|L1 -214340 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr6-7529 chr6 68416236 68416446 + 6.13 0.000 Intergenic L1MEd|LINE|L1 -86442 NR_125854 101928280 Hs.544560 NR_125854 ENSG00000226497 LINC02549 - long intergenic non-protein coding RNA 2549 ncRNA chr2-8195 chr2 88556361 88556571 + 6.13 0.000 TTS (NM_001313915) TTS (NM_001313915) 17746 NR_110236 101928371 Hs.738045 NR_110236 ENSG00000225420 LOC101928371 - uncharacterized LOC101928371 ncRNA chr15-4153 chr15 89003275 89003485 + 6.13 0.000 Intergenic MER4C|LTR|ERV1 -85076 NM_007011 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr5-8919 chr5 157449672 157449882 + 6.13 0.000 intron (NR_136204, intron 1 of 3) MIR|SINE|MIR -10242 NM_001099287 348938 Hs.4285 NM_001099287 ENSG00000172548 NIPAL4 ARCI6|ICHTHYIN|ICHYN NIPA like domain containing 4 protein-coding chr7-5913 chr7 97917092 97917302 + 6.13 0.000 intron (NR_147989, intron 3 of 18) MER53|DNA|hAT 11244 NM_001352496 440 Hs.489207 NM_001673 ENSG00000070669 ASNS ASNSD|TS11 asparagine synthetase (glutamine-hydrolyzing) protein-coding chr13-2136 chr13 99812031 99812241 + 6.13 0.000 intron (NR_120421, intron 1 of 4) MER46C|DNA|TcMar-Tigger -83135 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr11-7557 chr11 18854574 18854784 + 6.13 0.000 Intergenic L1PA15-16|LINE|L1 -61958 NM_001278236 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr18-3447 chr18 67149054 67149264 + 6.13 0.000 Intergenic Intergenic 67575 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr21-614 chr21 34869727 34869937 + 6.13 0.000 intron (NM_001001890, intron 2 of 5) intron (NM_001001890, intron 2 of 5) 18867 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr3-3573 chr3 53519524 53519734 + 6.13 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 25018 NM_001128839 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr22-3723 chr22 25661264 25661474 + 6.13 0.000 intron (NM_005160, intron 3 of 20) intron (NM_005160, intron 3 of 20) -80819 NM_032608 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr14-4047 chr14 55652276 55652486 + 6.13 0.000 intron (NR_073129, intron 26 of 45) intron (NR_073129, intron 26 of 45) 72174 NM_001079521 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding chr15-3485 chr15 96233505 96233715 + 6.13 0.000 intron (NR_125738, intron 2 of 4) MIRb|SINE|MIR -92436 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr4-5932 chr4 151841758 151841968 + 6.13 0.000 Intergenic Intergenic -80840 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr17-7964 chr17 47965414 47965624 + 6.13 0.000 Intergenic Intergenic -5009 NM_001278197 80279 Hs.20157 NM_025197 ENSG00000108465 CDK5RAP3 C53|HSF-27|IC53|LZAP|MST016|OK/SW-cl.114|PP1553 CDK5 regulatory subunit associated protein 3 protein-coding chr4-7770 chr4 94731922 94732132 + 6.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 25506 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr8-4115 chr8 71780625 71780835 + 6.13 0.000 Intergenic Intergenic -62393 NR_033652 100132891 Hs.137674 NR_033651 ENSG00000235531 MSC-AS1 - MSC antisense RNA 1 ncRNA chr2-11709 chr2 10014888 10015098 + 6.13 0.000 Intergenic CpG 28408 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr3-8781 chr3 4991581 4991791 + 6.13 0.000 Intergenic AluJb|SINE|Alu -11725 NR_125916 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr14-3031 chr14 56627932 56628142 + 6.13 0.000 intron (NM_017799, intron 12 of 15) L1MD2|LINE|L1 48239 NM_017799 54916 Hs.497253 NM_017799 ENSG00000070269 TMEM260 C14orf101|SHDRA transmembrane protein 260 protein-coding chr11-7195 chr11 131589975 131590185 + 6.13 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) -49213 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr3-4471 chr3 48967121 48967331 + 6.13 0.000 exon (NM_006321, exon 6 of 16) exon (NM_006321, exon 6 of 16) -22682 NM_177938 54681 Hs.654944 NM_017732 ENSG00000178467 P4HTM EGLN4|HIFPH4|P4H-TM|PH-4|PH4|PHD4 prolyl 4-hydroxylase, transmembrane protein-coding chr16-6502 chr16 59698176 59698386 + 6.13 0.000 Intergenic L2a|LINE|L2 56910 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr11-8231 chr11 66084235 66084445 + 6.13 0.000 intron (NM_018026, intron 1 of 23) L2a|LINE|L2 14068 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr15-5073 chr15 85855692 85855902 + 6.13 0.000 Intergenic MSTA|LTR|ERVL-MaLR 30162 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr7-6213 chr7 131060018 131060228 + 6.13 0.000 intron (NR_109850, intron 2 of 5) LTR12C|LTR|ERV1 46907 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr17-6637 chr17 65595083 65595293 + 6.13 0.000 Intergenic Intergenic -33540 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chrX-3834 chrX 151841083 151841293 + 6.13 0.000 Intergenic L1PB3|LINE|L1 69895 NR_136578 105373368 Hs.256904 NR_136578 MAGEA4-AS1 - MAGEA4 antisense RNA 1 ncRNA chr21-1789 chr21 38079418 38079628 + 6.13 0.000 intron (NR_147130, intron 2 of 2) intron (NR_147130, intron 2 of 2) 41837 NR_147130 10281 Hs.23251 NM_005867 ENSG00000184029 DSCR4 DCRB|DSCRB Down syndrome critical region 4 ncRNA chr16-5219 chr16 27217227 27217437 + 6.13 0.000 intron (NM_024773, intron 5 of 7) intron (NM_024773, intron 5 of 7) 13357 NM_001145348 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr3-5812 chr3 29103828 29104038 + 6.13 0.000 Intergenic MER58A|DNA|hAT-Charlie 177006 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr13-3373 chr13 80197500 80197710 + 6.13 0.000 Intergenic AluJo|SINE|Alu 142054 NM_001318538 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chrX-4427 chrX 54181865 54182075 + 6.13 0.000 intron (NM_198456, intron 1 of 1) intron (NM_198456, intron 1 of 1) 1284 NM_017848 54954 Hs.86045 NM_017848 ENSG00000184083 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding chr22-3552 chr22 17329252 17329462 + 6.13 0.000 Intergenic Intergenic -30592 NM_001290046 27443 Hs.231895 NM_031413 ENSG00000099954 CECR2 - CECR2 histone acetyl-lysine reader protein-coding chr5-7721 chr5 58795530 58795740 + 6.13 0.000 intron (NM_138453, intron 3 of 4) intron (NM_138453, intron 3 of 4) 204263 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr15-3165 chr15 68390453 68390663 + 6.13 0.000 intron (NM_001004439, intron 2 of 29) intron (NM_001004439, intron 2 of 29) 41605 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr10-8869 chr10 112524603 112524813 + 6.13 0.000 intron (NM_001365712, intron 3 of 8) intron (NM_001365712, intron 3 of 8) -77105 NM_001351082 64429 Hs.196990 NM_022494 ENSG00000023041 ZDHHC6 DHHC-6|ZNF376 zinc finger DHHC-type containing 6 protein-coding chr10-6153 chr10 392677 392887 + 6.13 0.000 intron (NM_014974, intron 10 of 36) (AC)n|Simple_repeat|Simple_repeat 212788 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr5-7010 chr5 155365191 155365401 + 6.13 0.000 Intergenic MamRep137|DNA|TcMar-Tigger 351541 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr6-7869 chr6 106792927 106793137 + 6.13 0.000 Intergenic MLT2F|LTR|ERVL -5491 NR_147986 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr12-4983 chr12 77651643 77651853 + 6.13 0.000 Intergenic Intergenic -179146 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr16-6632 chr16 68040569 68040779 + 6.13 0.000 intron (NM_017803, intron 3 of 16) intron (NM_017803, intron 3 of 16) -16807 NM_018380 55794 Hs.458313 NM_018380 ENSG00000182810 DDX28 MDDX28 DEAD-box helicase 28 protein-coding chr14-4672 chr14 55774233 55774443 + 6.13 0.000 Intergenic MLT2B1|LTR|ERVL 8093 NR_004844 645683 Hs.663461 NR_004844 ENSG00000177350 RPL13AP3 RPL13A_11_1370 ribosomal protein L13a pseudogene 3 pseudo chr19-6770 chr19 40561804 40562014 + 6.13 0.000 intron (NM_020971, intron 27 of 35) L2a|LINE|L2 -14964 NM_138392 92799 Hs.26506 NM_138392 ENSG00000160410 SHKBP1 PP203|Sb1 SH3KBP1 binding protein 1 protein-coding chr17-6571 chr17 45256874 45257084 + 6.13 0.000 intron (NM_152343, intron 2 of 4) intron (NM_152343, intron 2 of 4) -5101 NR_024435 100133991 Hs.668927 NR_024434 ENSG00000267278 MAP3K14-AS1 - MAP3K14 antisense RNA 1 ncRNA chr17-7697 chr17 31550180 31550390 + 6.13 0.000 Intergenic CpG -9711 NR_029710 406968 NR_029710 ENSG00000207614 MIR193A MIRN193|MIRN193A|mir-193a microRNA 193a ncRNA chr1-10613 chr1 178104402 178104612 + 6.13 0.000 intron (NM_170692, intron 1 of 17) L1ME4a|LINE|L1 10403 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr3-8062 chr3 8290496 8290706 + 6.13 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 211057 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr21-1351 chr21 34052423 34052633 + 6.13 0.000 Intergenic Helitron1Na_Mam|RC|Helitron -21050 NM_032476 64968 Hs.302742 NM_032476 ENSG00000243927 MRPS6 C21orf101|MRP-S6|RPMS6|S6mt mitochondrial ribosomal protein S6 protein-coding chr14-4686 chr14 57072595 57072805 + 6.13 0.000 Intergenic Intergenic 196205 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding chr1-14940 chr1 86313112 86313322 + 6.13 0.000 Intergenic MER57A-int|LTR|ERV1 44470 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chrX-2534 chrX 98399796 98400006 + 6.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -835366 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr10-2331 chr10 64112956 64113166 + 6.13 0.000 Intergenic Intergenic -591171 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr9-7807 chr9 80687409 80687619 + 6.13 0.000 Intergenic L1MCa|LINE|L1 712491 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr21-843 chr21 16587879 16588089 + 6.13 0.000 promoter-TSS (NR_136548) promoter-TSS (NR_136548) -614 NR_136548 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr5-4498 chr5 10877483 10877693 + 6.13 0.000 Intergenic MLT2B3|LTR|ERVL -116354 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr17-8517 chr17 79168461 79168671 + 6.13 0.000 intron (NM_001350453, intron 3 of 13) MIRb|SINE|MIR 93629 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr15-5305 chr15 101580622 101580832 + 6.13 0.000 Intergenic Intergenic 33612 NR_147041 101927505 Hs.578394 NR_147041 LINC02348 - long intergenic non-protein coding RNA 2348 ncRNA chr5-5626 chr5 154615270 154615480 + 6.13 0.000 Intergenic AluSx3|SINE|Alu -19303 NR_036094 100422950 NR_036094 ENSG00000264760 MIR3141 mir-3141 microRNA 3141 ncRNA chr14-2838 chr14 26995221 26995431 + 6.13 0.000 Intergenic ERVL-B4-int|LTR|ERVL 86684 NR_036193 100423019 NR_036193 ENSG00000265165 MIR4307 - microRNA 4307 ncRNA chr5-7176 chr5 5520749 5520959 + 6.13 0.000 Intergenic LTR7|LTR|ERV1 98177 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr2-11623 chr2 4269968 4270178 + 6.13 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 295912 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr2-9550 chr2 239631062 239631272 + 6.13 0.000 Intergenic Intergenic -131693 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr4-7093 chr4 32808837 32809047 + 6.13 0.000 Intergenic AluJr|SINE|Alu 457904 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr19-2272 chr19 703596 703806 + 6.13 0.000 Intergenic Intergenic -5234 NM_002579 5064 Hs.631841 NM_002579 ENSG00000099864 PALM PALM1 paralemmin protein-coding chr3-8665 chr3 179511810 179512020 + 6.13 0.000 Intergenic MER3|DNA|hAT-Charlie -50965 NM_177989 86 Hs.435326 NM_004301 ENSG00000136518 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin like 6A protein-coding chrX-5427 chrX 153606755 153606965 + 6.13 0.000 Intergenic Intergenic 7520 NR_131982 105373383 Hs.547831 NR_131982 ENSG00000260081 LOC105373383 - uncharacterized LOC105373383 ncRNA chr12-7440 chr12 61899839 61900049 + 6.13 0.000 intron (NM_178539, intron 1 of 4) MER2|DNA|TcMar-Tigger 292895 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr8-7008 chr8 109276861 109277071 + 6.13 0.000 intron (NM_032869, intron 6 of 9) intron (NM_032869, intron 6 of 9) 52967 NM_001128211 84955 Hs.380291 NM_032869 ENSG00000120526 NUDCD1 CML66|OVA66 NudC domain containing 1 protein-coding chr13-3252 chr13 34037559 34037769 + 6.13 0.000 Intergenic Intergenic 219515 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr6-5996 chr6 99809614 99809824 + 6.13 0.000 Intergenic Intergenic -184319 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr16-6934 chr16 85429152 85429362 + 6.13 0.000 Intergenic Intergenic -122932 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr20-2705 chr20 47565531 47565741 + 6.13 0.000 intron (NM_181659, intron 1 of 22) AluJb|SINE|Alu 63749 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr5-5376 chr5 133696068 133696278 + 6.13 0.000 Intergenic MIRb|SINE|MIR -83632 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr18-2803 chr18 3606428 3606638 + 6.13 0.000 intron (NR_119377, intron 1 of 2) intron (NR_119377, intron 1 of 2) 2796 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr7-8060 chr7 22886598 22886808 + 6.13 0.000 Intergenic Intergenic 30090 NR_003075 692210 NR_003075 ENSG00000221740 SNORD93 HBII-336 small nucleolar RNA, C/D box 93 snoRNA chrX-4004 chrX 16062957 16063167 + 6.13 0.000 Intergenic Intergenic -60503 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr4-5321 chr4 181662497 181662707 + 6.13 0.000 Intergenic Intergenic 167371 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr8-2191 chr8 130027820 130028030 + 6.13 0.000 Intergenic AluY|SINE|Alu -10796 NM_001353245 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr17-6979 chr17 49376457 49376667 + 6.13 0.000 intron (NR_110883, intron 4 of 4) MLT1D|LTR|ERVL-MaLR -14089 NM_014897 22834 Hs.463375 NM_014897 ENSG00000198740 ZNF652 - zinc finger protein 652 protein-coding chr16-5302 chr16 69795799 69796009 + 6.13 0.000 intron (NM_001270455, intron 2 of 8) AluSz6|SINE|Alu 33572 NM_007014 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr2-14161 chr2 204047231 204047441 + 6.13 0.000 Intergenic MER1B|DNA|hAT-Charlie 110588 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr6-2000 chr6 17864156 17864366 + 6.13 0.000 intron (NM_001105567, intron 4 of 36) intron (NM_001105567, intron 4 of 36) 123374 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr1-15716 chr1 170215058 170215268 + 6.13 0.000 intron (NR_146891, intron 1 of 4) (GTGG)n|Simple_repeat|Simple_repeat 40784 NR_146891 105371609 Hs.508115 NR_146891 LINC01681 - long intergenic non-protein coding RNA 1681 ncRNA chr13-4090 chr13 77786457 77786667 + 6.13 0.000 Intergenic Intergenic -32375 NR_103853 100505518 Hs.742215 NR_103853 EDNRB-AS1 - EDNRB antisense RNA 1 ncRNA chr10-4039 chr10 20809885 20810095 + 6.13 0.000 intron (NM_006393, intron 24 of 27) intron (NM_006393, intron 24 of 27) 87612 NM_006393 10529 Hs.5025 NM_006393 ENSG00000078114 NEBL LASP2|LNEBL nebulette protein-coding chrX-5086 chrX 126458596 126458806 + 6.13 0.000 Intergenic L1MA2|LINE|L1 94113 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr7-8051 chr7 22353019 22353229 + 6.13 0.000 intron (NM_012294, intron 1 of 25) L1MC5a|LINE|L1 4030 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr14-4615 chr14 52859112 52859322 + 6.13 0.000 TTS (NM_001135000) TTS (NM_001135000) -67610 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding chr10-6208 chr10 42582858 42583068 + 6.13 0.000 non-coding (NR_130948, exon 6 of 6) non-coding (NR_130948, exon 6 of 6) -30093 NR_026777 100129482 Hs.278064 NR_026777 ENSG00000234420 ZNF37BP KOX21|ZNF37B zinc finger protein 37B, pseudogene pseudo chr10-8007 chr10 61787547 61787757 + 6.13 0.000 Intergenic Intergenic -114047 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr7-6597 chr7 92654024 92654234 + 6.13 0.000 intron (NM_001259, intron 5 of 7) L1M6|LINE|L1 -63739 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr4-4509 chr4 61698292 61698502 + 6.13 0.000 intron (NM_001371342, intron 4 of 20) AluY|SINE|Alu 463368 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr3-9837 chr3 77648412 77648622 + 6.13 0.000 3' UTR (NM_002942, exon 26 of 26) 3' UTR (NM_002942, exon 26 of 26) 400446 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr6-7467 chr6 56777316 56777526 + 6.13 0.000 intron (NM_001144770, intron 2 of 94) LTR79|LTR|ERVL 66244 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chrX-3715 chrX 116239902 116240112 + 6.13 0.000 Intergenic Intergenic 69263 NM_000686 186 Hs.405348 NM_000686 ENSG00000180772 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor type 2 protein-coding chr8-6325 chr8 48556375 48556585 + 6.13 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 4913 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr1-14097 chr1 30600046 30600256 + 6.13 0.000 Intergenic Intergenic -118621 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr1-7716 chr1 26495371 26495581 + 6.13 0.000 Intergenic AluSc8|SINE|Alu 23036 NM_005517 3151 Hs.181163 NM_005517 ENSG00000198830 HMGN2 HMG17 high mobility group nucleosomal binding domain 2 protein-coding chr18-2082 chr18 49020251 49020461 + 6.13 0.000 Intergenic Intergenic -3347 NR_148999 100129878 Hs.437704 NR_148999 ENSG00000264269 LOC100129878 - uncharacterized LOC100129878 ncRNA chr2-4427 chr2 143991550 143991760 + 6.13 0.000 intron (NM_001354353, intron 7 of 9) SVA_D|Retroposon|SVA 54588 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr7-5447 chr7 38666743 38666953 + 6.13 0.000 Intergenic L2b|LINE|L2 20241 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chrX-2329 chrX 56766697 56766907 + 6.13 0.000 intron (NM_001348129, intron 2 of 2) intron (NM_001348129, intron 2 of 2) -29218 NR_002308 442454 Hs.663220 NR_002308 UQCRBP1 - ubiquinol-cytochrome c reductase binding protein pseudogene 1 pseudo chr5-5433 chr5 137492614 137492824 + 6.13 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 6607 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr1-10499 chr1 165247735 165247945 + 6.13 0.000 intron (NM_177398, intron 4 of 8) MIR|SINE|MIR 108401 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr1-16662 chr1 241906394 241906604 + 6.13 0.000 Intergenic L2c|LINE|L2 -51268 NM_001290693 441925 Hs.731347 NM_001290693 ENSG00000196289 BECN2 BECN1L1|BECN1P1 beclin 2 protein-coding chr9-2185 chr9 133054998 133055208 + 6.13 0.000 intron (NM_001122823, intron 9 of 11) intron (NM_001122823, intron 9 of 11) 3107 NR_106937 102465528 NR_106937 ENSG00000273932 MIR6877 hsa-mir-6877 microRNA 6877 ncRNA chr17-5903 chr17 73637055 73637265 + 6.13 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 7285 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chr14-3888 chr14 94533837 94534047 + 6.13 0.000 Intergenic Intergenic -16098 NM_173850 145264 Hs.99476 NM_173850 ENSG00000165953 SERPINA12 OL-64 serpin family A member 12 protein-coding chr10-8997 chr10 121130426 121130636 + 6.13 0.000 Intergenic LTR16C|LTR|ERVL 279169 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr5-7651 chr5 52735175 52735385 + 6.13 0.000 Intergenic Intergenic -52636 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr1-10189 chr1 111897162 111897372 + 6.13 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) -12390 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr3-11198 chr3 193780316 193780526 + 6.13 0.000 Intergenic L3|LINE|CR1 63588 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr10-7862 chr10 47294989 47295199 + 6.13 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -5103 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr3-7659 chr3 35985063 35985273 + 6.13 0.000 Intergenic Intergenic 240692 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr20-2728 chr20 49312446 49312656 + 6.13 0.000 Intergenic L2a|LINE|L2 31868 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr6-4941 chr6 101217202 101217412 + 6.13 0.000 Intergenic L1MA8|LINE|L1 -181678 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr10-4554 chr10 100872420 100872630 + 6.13 0.000 Intergenic Intergenic -40438 NM_001136123 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr6-8177 chr6 132733332 132733542 + 6.13 0.000 intron (NM_001368150, intron 2 of 7) L1PA13|LINE|L1 1328 NM_001368156 55350 Hs.183656 NM_018399 VNN3 HSA238982 vanin 3 protein-coding chrX-985 chrX 154947193 154947403 + 6.13 0.000 intron (NM_000132, intron 13 of 25) L1M2|LINE|L1 -59840 NR_036260 100422977 NR_036260 ENSG00000221603 MIR1184-3 - microRNA 1184-3 ncRNA chr19-4753 chr19 29409319 29409529 + 6.13 0.000 intron (NR_040029, intron 3 of 9) intron (NR_040029, intron 3 of 9) 116328 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr22-3760 chr22 27561571 27561781 + 6.13 0.000 Intergenic MLT2B1|LTR|ERVL 240080 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr20-4365 chr20 56487793 56488003 + 6.13 0.000 intron (NM_001283036, intron 5 of 8) MLT1C|LTR|ERVL-MaLR 19313 NM_001283035 51507 Hs.517134 NM_016407 ENSG00000022277 RTF2 C20orf43|CDAO5|HSPC164|RTFDC1|SHUJUN-3 replication termination factor 2 protein-coding chr16-4597 chr16 68341490 68341700 + 6.13 0.000 intron (NR_147058, intron 9 of 18) AluSp|SINE|Alu 30481 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr7-8096 chr7 25732643 25732853 + 6.13 0.000 intron (NR_157808, intron 1 of 4) LTR9B|LTR|ERV1 18284 NR_157814 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr20-1555 chr20 62990837 62991047 + 6.13 0.000 Intergenic Intergenic 16022 NM_080606 128408 Hs.551230 NM_080606 ENSG00000125533 BHLHE23 BETA4|BHLHB4|Beta3b|bA305P22.3 basic helix-loop-helix family member e23 protein-coding chr2-14548 chr2 230611149 230611359 + 6.13 0.000 Intergenic Intergenic 89275 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr14-4441 chr14 33115326 33115536 + 6.13 0.000 intron (NM_001164749, intron 2 of 11) MamGypsy2-I|LTR|Gypsy 176552 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr2-11343 chr2 202849639 202849849 + 6.13 0.000 intron (NM_001288622, intron 1 of 12) L1PA8|LINE|L1 -20510 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr2-11664 chr2 7245788 7245998 + 6.13 0.000 Intergenic Intergenic -168013 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr4-5488 chr4 76051669 76051879 + 6.13 0.000 intron (NM_001130017, intron 1 of 9) AluJb|SINE|Alu -15704 NM_005409 6373 Hs.632592 NM_005409 ENSG00000169248 CXCL11 H174|I-TAC|IP-9|IP9|SCYB11|SCYB9B|b-R1 C-X-C motif chemokine ligand 11 protein-coding chr19-5133 chr19 1766309 1766519 + 6.13 0.000 intron (NM_001080488, intron 1 of 1) intron (NM_001080488, intron 1 of 1) 12908 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr11-6078 chr11 33418851 33419061 + 6.13 0.000 intron (NM_012194, intron 1 of 20) AluSz|SINE|Alu 42848 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr1-10295 chr1 150437227 150437437 + 6.13 0.000 intron (NM_015203, intron 2 of 10) AluSc|SINE|Alu -50087 NR_073513 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr20-3803 chr20 23050118 23050328 + 6.13 0.000 promoter-TSS (NM_000361) promoter-TSS (NM_000361) -559 NM_000361 7056 Hs.2030 NM_000361 ENSG00000178726 THBD AHUS6|BDCA3|CD141|THPH12|THRM|TM thrombomodulin protein-coding chr1-13035 chr1 166053636 166053846 + 6.13 0.000 Intergenic Intergenic 101057 NR_030626 100126349 NR_030626 ENSG00000215952 MIR921 MIRN921|hsa-mir-921 microRNA 921 ncRNA chr6-4186 chr6 2467887 2468097 + 6.13 0.000 Intergenic Intergenic -166508 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr14-5419 chr14 104761373 104761583 + 6.13 0.000 Intergenic Intergenic 8331 NM_006427 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr12-4107 chr12 59541930 59542140 + 6.13 0.000 Intergenic SATR1|Satellite|Satellite -53994 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr7-7611 chr7 132274772 132274982 + 6.13 0.000 intron (NM_020911, intron 4 of 31) FLAM_C|SINE|Alu 14016 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr20-3675 chr20 12641370 12641580 + 6.13 0.000 Intergenic Intergenic 295488 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr1-16203 chr1 207987167 207987377 + 6.13 0.000 Intergenic Intergenic -76147 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr8-3651 chr8 6160282 6160492 + 6.13 0.000 Intergenic MamTip2|DNA|hAT-Tip100 246161 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr9-6165 chr9 76756455 76756665 + 6.13 0.000 intron (NM_001308048, intron 6 of 17) intron (NM_001308048, intron 6 of 17) -7876 NR_132312 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3|PRUNE2-AS1 prostate cancer associated 3 ncRNA chr3-8096 chr3 14712242 14712452 + 6.13 0.000 intron (NM_001184957, intron 7 of 16) MLT1C|LTR|ERVL-MaLR 37206 NM_032137 84077 Hs.661452 NM_032137 ENSG00000131379 C3orf20 - chromosome 3 open reading frame 20 protein-coding chr14-3921 chr14 102535487 102535697 + 6.13 0.000 Intergenic Intergenic -4052 NR_036192 100422954 NR_036192 ENSG00000266015 MIR4309 - microRNA 4309 ncRNA chr3-7799 chr3 88431017 88431227 + 6.13 0.000 intron (NM_001368168, intron 2 of 2) intron (NM_001368168, intron 2 of 2) 92666 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr10-7942 chr10 52894783 52894993 + 6.13 0.000 Intergenic Intergenic -123188 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr22-3791 chr22 29665040 29665250 + 6.13 0.000 intron (NR_156186, intron 10 of 16) intron (NR_156186, intron 10 of 16) -54858 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr18-2501 chr18 58374982 58375192 + 6.13 0.000 intron (NM_001144965, intron 24 of 30) intron (NM_001144965, intron 24 of 30) -75987 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr14-3497 chr14 102895914 102896124 + 6.13 0.000 intron (NM_145725, intron 9 of 11) Charlie9|DNA|hAT-Charlie -26637 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr5-5918 chr5 54974648 54974858 + 6.13 0.000 Intergenic Intergenic 10840 NM_001135604 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr8-6034 chr8 23567472 23567682 + 6.13 0.000 intron (NM_001317812, intron 2 of 3) intron (NM_001317812, intron 2 of 3) 38621 NM_016612 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr7-7652 chr7 146002888 146003098 + 6.13 0.000 Intergenic Intergenic -771278 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr2-9883 chr2 211746786 211746996 + 6.13 0.000 intron (NM_001042599, intron 5 of 26) MLT1O|LTR|ERVL-MaLR 679469 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr18-3475 chr18 70730111 70730321 + 6.13 0.000 Intergenic THE1B|LTR|ERVL-MaLR -79262 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr21-1642 chr21 23501289 23501499 + 6.13 0.000 Intergenic AluYh3|SINE|Alu -116559 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA chr6-7867 chr6 106696289 106696499 + 6.13 0.000 non-coding (NR_149100, exon 2 of 3) non-coding (NR_149100, exon 2 of 3) 909 NR_149100 105377926 Hs.635821 NR_149100 ENSG00000229654 LINC02526 - long intergenic non-protein coding RNA 2526 ncRNA chr13-3105 chr13 54289175 54289385 + 6.13 0.000 Intergenic AluYb8|SINE|Alu 22768 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr16-5978 chr16 4956982 4957192 + 6.13 0.000 Intergenic AluJo|SINE|Alu -1243 NM_014692 9717 Hs.512856 NM_014692 ENSG00000103184 SEC14L5 PRELID4B SEC14 like lipid binding 5 protein-coding chr4-8276 chr4 141646068 141646278 + 6.13 0.000 intron (NR_037840, intron 1 of 7) L2a|LINE|L2 9590 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr5-6399 chr5 145764381 145764591 + 6.13 0.000 intron (NM_205846, intron 6 of 6) intron (NM_205846, intron 6 of 6) 70856 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr17-7121 chr17 75865031 75865241 + 6.13 0.000 Intergenic AluSx3|SINE|Alu -8700 NM_001348170 23558 Hs.514489 NM_012478 ENSG00000132471 WBP2 DFNB107|GRAMD6|WBP-2 WW domain binding protein 2 protein-coding chr17-8089 chr17 55519444 55519654 + 6.13 0.000 Intergenic L2|LINE|L2 -97714 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr16-4776 chr16 85416476 85416686 + 6.13 0.000 Intergenic Intergenic -110256 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr4-7649 chr4 84568627 84568837 + 6.13 0.000 Intergenic L2|LINE|L2 -14395 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr12-4145 chr12 78313062 78313272 + 6.13 0.000 Intergenic L1ME3|LINE|L1 46579 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr6-6096 chr6 149913519 149913729 + 6.13 0.000 intron (NR_045127, intron 2 of 2) intron (NR_045127, intron 2 of 2) 9497 NR_130110 353091 Hs.535023 NM_001001788 ENSG00000203722 RAET1G ULBP5 retinoic acid early transcript 1G protein-coding chr19-3762 chr19 56173837 56174047 + 6.13 0.000 Intergenic AluSx|SINE|Alu -2066 NM_033106 85569 Hs.283915 NM_033106 ENSG00000197487 GALP - galanin like peptide protein-coding chr1-5923 chr1 19241410 19241620 + 6.13 0.000 TTS (NR_135114) TTS (NR_135114) 10009 NM_001271427 23065 Hs.439200 NM_015047 ENSG00000127463 EMC1 CAVIPMR|KIAA0090 ER membrane protein complex subunit 1 protein-coding chr5-6857 chr5 118965172 118965382 + 6.13 0.000 intron (NM_173666, intron 1 of 5) SVA_C|Retroposon|SVA -9309 NR_128710 103504734 NR_128710 ENSG00000283475 MIR1244-4 hsa-mir-1244-4 microRNA 1244-4 ncRNA chr2-10097 chr2 54749832 54750042 + 6.13 0.000 intron (NM_001039753, intron 1 of 40) intron (NM_001039753, intron 1 of 40) 24925 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr6-4852 chr6 86705088 86705298 + 6.13 0.000 Intergenic L1PA10|LINE|L1 -232335 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chrX-1366 chrX 150429865 150430075 + 6.13 0.000 intron (NM_001177465, intron 1 of 4) L1MDa|LINE|L1 -15484 NM_001177466 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr11-4587 chr11 130840335 130840545 + 6.13 0.000 Intergenic Intergenic 21670 NR_125383 100507431 Hs.375101 NR_125383 LINC02551 - long intergenic non-protein coding RNA 2551 ncRNA chr4-6719 chr4 3945990 3946200 + 6.13 0.000 intron (NR_130742, intron 3 of 3) intron (NR_130742, intron 3 of 3) 9333 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chrX-3709 chrX 114247205 114247415 + 6.13 0.000 Intergenic L1MA9|LINE|L1 -309092 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr3-8808 chr3 6889684 6889894 + 6.13 0.000 intron (NM_000844, intron 1 of 9) L1PA3|LINE|L1 4228 NR_131906 105376946 Hs.616038 NR_131906 ENSG00000237665 GRM7-AS2 - GRM7 antisense RNA 2 ncRNA chr1-8672 chr1 211300841 211301051 + 6.13 0.000 intron (NM_018254, intron 8 of 10) MamRep137|DNA|TcMar-Tigger -25669 NM_004619 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr3-4832 chr3 142223027 142223237 + 6.13 0.000 intron (NM_001039547, intron 1 of 15) intron (NM_001039547, intron 1 of 15) 2453 NR_033289 256356 Hs.135904 NM_152776 ENSG00000175066 GK5 - glycerol kinase 5 protein-coding chr9-6811 chr9 35795851 35796061 + 6.13 0.000 intron (NM_003995, intron 2 of 21) L2a|LINE|L2 3547 NM_003995 4882 Hs.78518 NM_000907 ENSG00000159899 NPR2 AMDM|ANPRB|ANPb|ECDM|GUC2B|GUCY2B|NPRB|NPRBi|SNSK natriuretic peptide receptor 2 protein-coding chr5-7983 chr5 83955921 83956131 + 6.13 0.000 intron (NM_001278642, intron 9 of 9) intron (NM_001278642, intron 9 of 9) -235171 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr18-1579 chr18 35944644 35944854 + 6.13 0.000 Intergenic Intergenic -10607 NR_037497 100500864 NR_037497 ENSG00000265641 MIR3929 - microRNA 3929 ncRNA chr12-6893 chr12 22635931 22636141 + 6.13 0.000 intron (NM_001039481, intron 1 of 2) AluJb|SINE|Alu 10865 NM_001039481 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr1-16506 chr1 230004975 230005185 + 6.13 0.000 intron (NR_135116, intron 1 of 1) intron (NR_135116, intron 1 of 1) 2363 NR_135116 101927532 Hs.40183 NR_135116 ENSG00000228058 LINC01736 - long intergenic non-protein coding RNA 1736 ncRNA chr3-6888 chr3 154574374 154574584 + 6.13 0.000 Intergenic L1M1|LINE|L1 -144289 NM_001038705 344758 Hs.376338 NM_001038705 ENSG00000174948 GPR149 IEDA|PGR10|R35 G protein-coupled receptor 149 protein-coding chr2-9424 chr2 232492204 232492414 + 6.13 0.000 Intergenic AluJr|SINE|Alu -4475 NM_001290787 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr6-5669 chr6 101307124 101307334 + 6.13 0.000 Intergenic Intergenic -91756 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr1-12904 chr1 113303313 113303523 + 6.13 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -87097 NM_001142782 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr14-3375 chr14 92690446 92690656 + 6.13 0.000 Intergenic Intergenic 58076 NM_005606 5641 Hs.18069 NM_005606 ENSG00000100600 LGMN AEP|LGMN1|PRSC1 legumain protein-coding chr7-8646 chr7 70669235 70669445 + 6.13 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -462804 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr22-2774 chr22 41429178 41429388 + 6.13 0.000 Intergenic Intergenic 17518 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding chr11-5781 chr11 5154459 5154669 + 6.13 0.000 Intergenic Intergenic -2195 NM_012375 23538 Hs.553520 NM_012375 ENSG00000182070 OR52A1 HPFH1OR olfactory receptor family 52 subfamily A member 1 protein-coding chr20-4187 chr20 45602430 45602640 + 6.13 0.000 Intergenic L1MA9|LINE|L1 -23251 NM_181510 90199 Hs.116128 NM_130896 ENSG00000158901 WFDC8 C20orf170|HEL-S-292|WAP8|dJ461P17.1 WAP four-disulfide core domain 8 protein-coding chrX-1441 chrX 65540731 65540941 + 6.13 0.000 Intergenic AluJr|SINE|Alu -6030 NM_031206 81887 Hs.522675 NM_031206 ENSG00000001497 LAS1L Las1-like|WTS|dJ475B7.2 LAS1 like, ribosome biogenesis factor protein-coding chr2-3580 chr2 47433025 47433235 + 6.13 0.000 intron (NM_000251, intron 7 of 15) SVA_D|Retroposon|SVA 30063 NM_001258281 4436 Hs.597656 NM_000251 ENSG00000095002 MSH2 COCA1|FCC1|HNPCC|HNPCC1|LCFS2|hMSH2 mutS homolog 2 protein-coding chr7-7429 chr7 76301516 76301726 + 6.13 0.000 Intergenic AluSx1|SINE|Alu -1052 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr8-4884 chr8 70092809 70093019 + 6.13 0.000 Intergenic Intergenic -21662 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr3-3891 chr3 42541111 42541321 + 6.13 0.000 Intergenic Intergenic -8610 NR_046654 100874007 Hs.600642 NR_046654 VIPR1-AS1 - VIPR1 antisense RNA 1 ncRNA chr4-8593 chr4 169784963 169785173 + 6.13 0.000 Intergenic SATR2|Satellite|Satellite -27124 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr16-6836 chr16 81746310 81746520 + 6.13 0.000 Intergenic L1M6|LINE|L1 -32876 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr10-3451 chr10 49363375 49363585 + 6.13 0.000 TTS (NM_001276451) TTS (NM_001276451) 32609 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding chr16-6744 chr16 74943427 74943637 + 6.13 0.000 intron (NM_001324172, intron 6 of 13) intron (NM_001324172, intron 6 of 13) 41591 NM_030581 79726 Hs.280951 NM_030581 ENSG00000103091 WDR59 CDW12|FP977|p90-120 WD repeat domain 59 protein-coding chr7-4426 chr7 106679181 106679391 + 6.13 0.000 Intergenic Intergenic -18128 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr15-2511 chr15 38756284 38756494 + 6.13 0.000 Intergenic Intergenic 59791 NR_160786 chr7-9544 chr7 140485484 140485694 + 6.13 0.000 Intergenic Intergenic -6020 NM_001145125 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chr1-10429 chr1 158514920 158515130 + 6.13 0.000 Intergenic Intergenic 33080 NM_001005189 391112 Hs.553780 NM_001005189 ENSG00000197532 OR6Y1 OR1-11|OR6Y2 olfactory receptor family 6 subfamily Y member 1 protein-coding chr19-6915 chr19 45926076 45926286 + 6.13 0.000 Intergenic Intergenic -11403 NM_001029861 339345 Hs.434218 NM_001029861 ENSG00000188425 NANOS2 NOS2|ZC2HC12B nanos C2HC-type zinc finger 2 protein-coding chr10-9158 chr10 128883718 128883928 + 6.13 0.000 Intergenic Intergenic -29010 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr3-9053 chr3 24258427 24258637 + 6.13 0.000 intron (NM_001354708, intron 2 of 9) intron (NM_001354708, intron 2 of 9) 107208 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr9-4304 chr9 121812218 121812428 + 6.13 0.000 Intergenic Intergenic 69538 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr8-5856 chr8 13393746 13393956 + 6.13 0.000 intron (NM_024767, intron 3 of 4) intron (NM_024767, intron 3 of 4) -117067 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr2-11607 chr2 2925462 2925672 + 6.13 0.000 intron (NR_110228, intron 5 of 6) AluJr4|SINE|Alu 200459 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr11-7640 chr11 61482575 61482785 + 6.13 0.000 exon (NM_001170753, exon 4 of 13) exon (NM_001170753, exon 4 of 13) 1560 NM_145017 220004 Hs.729003 NM_145017 ENSG00000162148 PPP1R32 C11orf66|IIIG9 protein phosphatase 1 regulatory subunit 32 protein-coding chr2-13748 chr2 169715004 169715214 + 6.13 0.000 intron (NR_144936, intron 3 of 4) HERVL18-int|LTR|ERVL -18723 NM_144711 151230 Hs.655150 NM_144711 ENSG00000213160 KLHL23 DITHP kelch like family member 23 protein-coding chr7-8192 chr7 31374419 31374629 + 6.13 0.000 Intergenic Intergenic -33798 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr20-1661 chr20 32027259 32027469 + 6.13 0.000 intron (NM_001365692, intron 7 of 9) intron (NM_001365692, intron 7 of 9) 16926 NM_001365692 140706 Hs.382151 NM_080625 ENSG00000101331 CCM2L C20orf160|dJ310O13.5 CCM2 like scaffold protein protein-coding chr6-8500 chr6 157881816 157882026 + 6.13 0.000 intron (NM_016224, intron 4 of 17) Tigger1|DNA|TcMar-Tigger 58675 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr10-3446 chr10 47311484 47311694 + 6.13 0.000 intron (NM_004962, intron 2 of 2) intron (NM_004962, intron 2 of 2) -10865 NM_016204 2658 Hs.279463 NM_016204 ENSG00000263761 GDF2 BMP-9|BMP9|HHT5 growth differentiation factor 2 protein-coding chr8-4985 chr8 138820620 138820830 + 6.13 0.000 intron (NM_152888, intron 7 of 64) (TGTA)n|Simple_repeat|Simple_repeat 93316 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr11-10216 chr11 97729648 97729858 + 6.13 0.000 Intergenic Intergenic 1221328 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr17-5405 chr17 33916204 33916414 + 6.13 0.000 intron (NM_001094, intron 1 of 9) MLT1K|LTR|ERVL-MaLR 240497 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr7-5973 chr7 101333739 101333949 + 6.13 0.000 Intergenic MER66B|LTR|ERV1 -12021 NM_001287526 64792 Hs.389104 NM_022777 ENSG00000128581 IFT22 RABL5 intraflagellar transport 22 protein-coding chr22-2610 chr22 32011746 32011956 + 6.13 0.000 intron (NR_149128, intron 4 of 4) L1M4c|LINE|L1 -31410 NM_000343 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr11-3828 chr11 68161717 68161927 + 6.13 0.000 intron (NM_001300908, intron 10 of 10) intron (NM_001300908, intron 10 of 10) -40431 NM_212469 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr17-5905 chr17 73988571 73988781 + 6.13 0.000 Intergenic Intergenic -160139 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr7-8146 chr7 28758006 28758216 + 6.13 0.000 intron (NM_001011666, intron 3 of 6) intron (NM_001011666, intron 3 of 6) 71978 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr4-6531 chr4 170014389 170014599 + 6.13 0.000 intron (NM_021647, intron 1 of 2) intron (NM_021647, intron 1 of 2) -10717 NM_001009554 9848 Hs.593942 NM_021647 ENSG00000198948 MFAP3L NYD-sp9 microfibril associated protein 3 like protein-coding chr17-6599 chr17 55190284 55190494 + 6.13 0.000 Intergenic Intergenic -74571 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr9-8514 chr9 125574416 125574626 + 6.13 0.000 intron (NM_001006619, intron 5 of 10) intron (NM_001006619, intron 5 of 10) 132687 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr4-7640 chr4 84044935 84045145 + 6.13 0.000 intron (NR_125909, intron 7 of 8) intron (NR_125909, intron 7 of 8) 254129 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr8-5210 chr8 114629150 114629360 + 6.13 0.000 Intergenic Intergenic 1038758 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8-5663 chr8 114227707 114227917 + 6.13 0.000 Intergenic L1ME2|LINE|L1 -790873 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr6-7517 chr6 65524269 65524479 + 6.13 0.000 intron (NM_001292009, intron 2 of 43) ERVL-B4-int|LTR|ERVL 55430 NM_198283 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding chr4-2339 chr4 179650694 179650904 + 6.13 0.000 Intergenic AluJo|SINE|Alu 1508350 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chrX-3974 chrX 13471136 13471346 + 6.13 0.000 Intergenic L2a|LINE|L2 -98360 NM_015507 25975 Hs.12844 NM_015507 ENSG00000198759 EGFL6 MAEG|W80 EGF like domain multiple 6 protein-coding chr4-5505 chr4 82363852 82364062 + 6.13 0.000 intron (NM_001003810, intron 1 of 6) MIR|SINE|MIR 10034 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr1-12312 chr1 246141620 246141830 + 6.13 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 275687 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr3-8353 chr3 76999385 76999595 + 6.13 0.000 Intergenic Intergenic -40609 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr12-4774 chr12 53172425 53172635 + 6.13 0.000 exon (NM_015989, exon 5 of 17) exon (NM_015989, exon 5 of 17) -8037 NM_001244706 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr15-4571 chr15 59010669 59010879 + 6.13 0.000 intron (NM_001270530, intron 1 of 13) intron (NM_001270530, intron 1 of 13) 22628 NM_001270530 54778 Hs.404423 NM_017610 ENSG00000157450 RNF111 ARK|hRNF111 ring finger protein 111 protein-coding chr16-5591 chr16 50935297 50935507 + 6.13 0.000 intron (NR_039672, intron 2 of 6) LTR16E1|LTR|ERVL 56629 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chrX-4838 chrX 103399555 103399765 + 6.13 0.000 Intergenic Intergenic 22622 NM_014380 27018 Hs.448588 NM_014380 ENSG00000166681 BEX3 Bex|DXS6984E|HGR74|NADE|NGFRAP1 brain expressed X-linked 3 protein-coding chr11-7983 chr11 10626479 10626689 + 6.13 0.000 intron (NM_001100163, intron 8 of 20) intron (NM_001100163, intron 8 of 20) 25717 NM_001098579 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr3-9658 chr3 61327344 61327554 + 6.13 0.000 Intergenic MLT2B2|LTR|ERVL -75988 NR_148921 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr10-7337 chr10 633297 633507 + 6.13 0.000 intron (NM_014974, intron 1 of 36) CpG 4838 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr17-7406 chr17 8962673 8962883 + 6.13 0.000 intron (NM_001142633, intron 1 of 18) MER104|DNA|TcMar-Tc2 2929 NM_001251851 23533 Hs.278901 NM_014308 ENSG00000141506 PIK3R5 F730038I15Rik|FOAP-2|P101-PI3K|p101 phosphoinositide-3-kinase regulatory subunit 5 protein-coding chr3-8158 chr3 32852082 32852292 + 6.13 0.000 intron (NM_001039111, intron 1 of 3) intron (NM_001039111, intron 1 of 3) 34190 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr12-7058 chr12 41058613 41058823 + 6.13 0.000 intron (NM_001843, intron 23 of 23) intron (NM_001843, intron 23 of 23) -129602 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr11-10423 chr11 115674283 115674493 + 6.13 0.000 Intergenic Intergenic 60374 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr5-8646 chr5 139926762 139926972 + 6.13 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 116432 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr12-7901 chr12 107662528 107662738 + 6.13 0.000 Intergenic Intergenic -23099 NM_001317963 11137 Hs.506652 NM_007062 ENSG00000136045 PWP1 IEF-SSP-9502 PWP1 homolog, endonuclein protein-coding chr19-6803 chr19 41772668 41772878 + 6.13 0.000 TTS (NM_002483) TTS (NM_002483) 17243 NM_002483 4680 Hs.466814 NM_002483 ENSG00000086548 CEACAM6 CD66c|CEAL|NCA carcinoembryonic antigen related cell adhesion molecule 6 protein-coding chr9-7948 chr9 90967015 90967225 + 6.13 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 108012 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr8-4254 chr8 92449500 92449710 + 6.13 0.000 Intergenic Intergenic 205889 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr9-8870 chr9 136060577 136060787 + 6.13 0.000 intron (NM_144653, intron 1 of 5) intron (NM_144653, intron 1 of 5) 34607 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr5-6819 chr5 103889135 103889345 + 6.13 0.000 Intergenic Intergenic -326451 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr1-12801 chr1 84244162 84244372 + 6.13 0.000 Intergenic Intergenic -54271 NM_001010971 148418 Hs.591445 NM_001010971 ENSG00000203943 SAMD13 HSD-41|HSD-42 sterile alpha motif domain containing 13 protein-coding chr16-5070 chr16 74492796 74493006 + 6.13 0.000 intron (NR_027264, intron 7 of 26) intron (NR_027264, intron 7 of 26) -71431 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr7-5925 chr7 98998675 98998885 + 6.13 0.000 intron (NM_003496, intron 65 of 70) intron (NM_003496, intron 65 of 70) -14385 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr6-6006 chr6 105873304 105873514 + 6.13 0.000 Intergenic Intergenic -212927 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr10-9004 chr10 121726727 121726937 + 6.13 0.000 Intergenic LTR16A1|LTR|ERVL -128374 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chrX-5069 chrX 124518900 124519110 + 6.13 0.000 intron (NM_014253, intron 18 of 30) intron (NM_014253, intron 18 of 30) 172723 NM_002351 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chrX-3074 chrX 117935085 117935295 + 6.13 0.000 intron (NM_001168301, intron 3 of 7) L1MB7|LINE|L1 38548 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr2-14341 chr2 218252776 218252986 + 6.13 0.000 intron (NM_152862, intron 10 of 10) intron (NM_152862, intron 10 of 10) -6615 NM_001321950 151306 Hs.160954 NM_170699 ENSG00000179921 GPBAR1 BG37|GPCR19|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding chr16-5560 chr16 30837831 30838041 + 6.13 0.000 intron (NM_001286526, intron 5 of 5) intron (NM_001286526, intron 5 of 5) 37387 NR_039744 100616231 NR_039744 ENSG00000265991 MIR4519 - microRNA 4519 ncRNA chr4-2760 chr4 12956053 12956263 + 6.13 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 528182 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr3-8034 chr3 194879904 194880114 + 6.13 0.000 Intergenic Intergenic -111300 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr16-4380 chr16 49666919 49667129 + 6.13 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) -2700 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr10-8531 chr10 92842628 92842838 + 6.13 0.000 intron (NM_001319194, intron 2 of 22) intron (NM_001319194, intron 2 of 22) -5722 NM_001319200 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr10-6881 chr10 32740567 32740777 + 6.13 0.000 intron (NM_001321115, intron 29 of 43) intron (NM_001321115, intron 29 of 43) 160800 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr20-3437 chr20 47895928 47896138 + 6.13 0.000 Intergenic D20S16|Satellite|Satellite -87193 NR_109942 101060004 Hs.129970 NR_109942 LINC01523 - long intergenic non-protein coding RNA 1523 ncRNA chr15-4542 chr15 56336606 56336816 + 6.13 0.000 Intergenic LTR16|LTR|ERVL -28713 NM_198524 374618 Hs.511476 NM_198524 ENSG00000151575 TEX9 - testis expressed 9 protein-coding chr6-5375 chr6 151156696 151156906 + 6.13 0.000 Intergenic AluJb|SINE|Alu 54126 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr8-4047 chr8 61926735 61926945 + 6.13 0.000 Intergenic Intergenic 37001 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr3-10651 chr3 148779194 148779404 + 6.13 0.000 Intergenic Intergenic -48512 NM_001871 1360 Hs.477891 NM_001871 ENSG00000153002 CPB1 CPB|PASP|PCPB carboxypeptidase B1 protein-coding chr2-12939 chr2 102061149 102061359 + 6.13 0.000 Intergenic Intergenic -9136 NM_001320978 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr4-4416 chr4 46934851 46935061 + 6.13 0.000 intron (NM_001204267, intron 7 of 7) intron (NM_001204267, intron 7 of 7) -25711 NM_130902 170712 Hs.479656 NM_130902 ENSG00000170516 COX7B2 - cytochrome c oxidase subunit 7B2 protein-coding chr11-10710 chr11 130737462 130737672 + 6.13 0.000 Intergenic Intergenic 64611 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding chr2-4394 chr2 60673246 60673456 + 6.13 0.000 Intergenic Intergenic -82917 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr6-2459 chr6 35440153 35440363 + 6.13 0.000 Intergenic Intergenic -12103 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr7-5741 chr7 73829586 73829796 + 6.13 0.000 Intergenic L2a|LINE|L2 -1172 NM_001305 1364 Hs.647036 NM_001305 ENSG00000189143 CLDN4 CPE-R|CPER|CPETR|CPETR1|WBSCR8|hCPE-R claudin 4 protein-coding chr2-6196 chr2 10911543 10911753 + 6.13 0.000 promoter-TSS (NM_002236) promoter-TSS (NM_002236) -286 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr6-7794 chr6 97928787 97928997 + 6.13 0.000 Intergenic Intergenic -95639 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr16-3035 chr16 49837172 49837382 + 6.13 0.000 intron (NM_001271620, intron 1 of 7) MIRc|SINE|MIR -14539 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr14-3369 chr14 92336858 92337068 + 6.13 0.000 intron (NM_153647, intron 3 of 17) intron (NM_153647, intron 3 of 17) 13155 NM_153646 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr5-4848 chr5 63122086 63122296 + 6.13 0.000 Intergenic Intergenic 543372 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr2-11901 chr2 24155309 24155519 + 6.13 0.000 intron (NM_001145710, intron 7 of 10) intron (NM_001145710, intron 7 of 10) -19639 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr2-12109 chr2 34411417 34411627 + 6.13 0.000 Intergenic Intergenic -266035 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr20-4380 chr20 57432208 57432418 + 6.13 0.000 Intergenic AluSz|SINE|Alu -39257 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA chr2-9958 chr2 4232123 4232333 + 6.13 0.000 Intergenic Intergenic 258067 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr15-4285 chr15 37854186 37854396 + 6.13 0.000 Intergenic Intergenic -80316 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr12-6808 chr12 11779383 11779593 + 6.13 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 129634 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr17-7377 chr17 7737571 7737781 + 6.13 0.000 intron (NM_020877, intron 8 of 85) intron (NM_020877, intron 8 of 85) -16644 NR_002778 118432 Hs.658086 NR_002778 ENSG00000240480 RPL29P2 RPL29_10_1510 ribosomal protein L29 pseudogene 2 pseudo chr5-6383 chr5 139999620 139999830 + 6.13 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 43574 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr4-6448 chr4 139546158 139546368 + 6.13 0.000 intron (NR_131339, intron 3 of 3) intron (NR_131339, intron 3 of 3) 10506 NR_131339 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr2-11073 chr2 121363725 121363935 + 6.13 0.000 intron (NM_015282, intron 35 of 38) intron (NM_015282, intron 35 of 38) -78628 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr8-6195 chr8 35083440 35083650 + 6.13 0.000 Intergenic Intergenic -151930 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr4-7222 chr4 42872017 42872227 + 6.13 0.000 Intergenic Intergenic -21144 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr2-10495 chr2 223762925 223763135 + 6.13 0.000 intron (NR_110905, intron 5 of 5) intron (NR_110905, intron 5 of 5) 74552 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr9-5112 chr9 35854121 35854331 + 6.13 0.000 3' UTR (NM_001042590, exon 13 of 13) 3' UTR (NM_001042590, exon 13 of 13) 16175 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chr7-1701 chr7 1038395 1038605 + 6.13 0.000 intron (NM_001134395, intron 2 of 4) SVA_F|Retroposon|SVA -6046 NM_001303473 115330 Hs.585007 NM_138445 ENSG00000164849 GPR146 PGR8 G protein-coupled receptor 146 protein-coding chr12-4956 chr12 72750772 72750982 + 6.13 0.000 Intergenic Intergenic -408313 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LINC02444 - long intergenic non-protein coding RNA 2444 ncRNA chr3-10855 chr3 167569047 167569257 + 6.13 0.000 intron (NM_001348951, intron 8 of 18) AluSg7|SINE|Alu 84790 NM_001366157 151790 Hs.213762 NM_178824 ENSG00000174776 WDR49 - WD repeat domain 49 protein-coding chr13-2482 chr13 51786579 51786789 + 6.13 0.000 intron (NM_001031719, intron 4 of 7) intron (NM_001031719, intron 4 of 7) 17478 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chrX-5437 chrX 153887844 153888054 + 6.13 0.000 intron (NR_130768, intron 6 of 6) MIRb|SINE|MIR -1776 NM_001278116 3897 Hs.522818 NM_000425 ENSG00000198910 L1CAM CAML1|CD171|HSAS|HSAS1|MASA|MIC5|N-CAM-L1|N-CAML1|NCAM-L1|S10|SPG1 L1 cell adhesion molecule protein-coding chrX-3698 chrX 110834915 110835125 + 6.13 0.000 Intergenic Intergenic -39203 NM_001367209 91851 Hs.496587 NM_145234 ENSG00000101938 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin like 1 protein-coding chr16-4266 chr16 24118242 24118452 + 6.13 0.000 intron (NM_002738, intron 8 of 16) intron (NM_002738, intron 8 of 16) -84769 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr2-9846 chr2 171410550 171410760 + 6.13 0.000 intron (NM_024770, intron 1 of 9) MARNA|DNA|TcMar-Mariner 23335 NM_001321154 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr2-3426 chr2 74351836 74352046 + 6.13 0.000 Intergenic Intergenic -8525 NM_133478 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr11-8473 chr11 117594886 117595096 + 6.13 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 202225 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr20-3757 chr20 19583988 19584198 + 6.13 0.000 intron (NM_020689, intron 4 of 16) intron (NM_020689, intron 4 of 16) -299497 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr7-6753 chr7 8606805 8607015 + 6.13 0.000 intron (NM_152745, intron 2 of 2) intron (NM_152745, intron 2 of 2) 173301 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr14-3235 chr14 75479976 75480186 + 6.13 0.000 Intergenic Intergenic -42388 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chrX-5120 chrX 129107595 129107805 + 6.13 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 415790 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chrX-4529 chrX 67642987 67643197 + 6.13 0.000 intron (NM_001011645, intron 2 of 8) intron (NM_001011645, intron 2 of 8) 98469 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr11-7534 chr11 12871909 12872119 + 6.13 0.000 intron (NM_021961, intron 5 of 12) intron (NM_021961, intron 5 of 12) 117534 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr12-8280 chr12 125624713 125624923 + 6.13 0.000 intron (NM_001286219, intron 1 of 4) L1MC4a|LINE|L1 2366 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr17-7602 chr17 22269793 22270003 + 6.13 0.000 Intergenic Intergenic -28866 NR_028336 284123 Hs.348578 NM_203392 ENSG00000178130 FAM27E5 FAM27L family with sequence similarity E5 ncRNA chr2-8891 chr2 178177141 178177351 + 6.13 0.000 Intergenic L2|LINE|L2 -17235 NM_001201482 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr4-5341 chr4 183765189 183765399 + 6.13 0.000 Intergenic Intergenic -32728 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr3-10958 chr3 176855905 176856115 + 6.13 0.000 Intergenic Intergenic -39009 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr8-3688 chr8 17605736 17605946 + 6.13 0.000 intron (NM_006207, intron 3 of 6) intron (NM_006207, intron 3 of 6) 29408 NM_006207 5157 Hs.458573 NM_006207 ENSG00000104213 PDGFRL PDGRL|PRLTS platelet derived growth factor receptor like protein-coding chr21-916 chr21 29758949 29759159 + 6.13 0.000 intron (NR_027021, intron 3 of 4) intron (NR_027021, intron 3 of 4) 10879 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA chr4-6277 chr4 79620801 79621011 + 6.13 0.000 Intergenic Intergenic 128313 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr4-5991 chr4 185223327 185223537 + 6.13 0.000 intron (NM_001317781, intron 1 of 18) L1MC5|LINE|L1 19195 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr7-6488 chr7 6218900 6219110 + 6.13 0.000 intron (NM_001367581, intron 1 of 13) AluSc|SINE|Alu -46868 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr1-12071 chr1 150052723 150052933 + 6.13 0.000 Intergenic L1PREC2|LINE|L1 -14554 NM_001279353 11311 Hs.443750 NM_007259 ENSG00000136631 VPS45 H1|H1VPS45|SCN5|VPS45A|VPS45B|VPS54A|VSP45|VSP45A vacuolar protein sorting 45 homolog protein-coding chr20-2895 chr20 63253914 63254124 + 6.13 0.000 promoter-TSS (NM_001363718) promoter-TSS (NM_001363718) 41 NR_024389 100192386 Hs.111539 NR_024389 ENSG00000275620 FLJ16779 - uncharacterized LOC100192386 ncRNA chr10-8164 chr10 71124957 71125167 + 6.13 0.000 Intergenic L1PA13|LINE|L1 -87508 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr1-14775 chr1 69225024 69225234 + 6.13 0.000 Intergenic Intergenic 169231 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr3-9418 chr3 48580349 48580559 + 6.13 0.000 intron (NM_000094, intron 54 of 117) intron (NM_000094, intron 54 of 117) -1477 NR_031756 100313843 NR_031756 ENSG00000284251 MIR711 hsa-mir-711 microRNA 711 ncRNA chr22-3726 chr22 25851901 25852111 + 6.13 0.000 intron (NM_001318245, intron 21 of 43) intron (NM_001318245, intron 21 of 43) 109818 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr3-5193 chr3 71482302 71482512 + 6.13 0.000 intron (NR_146142, intron 3 of 19) AluSx|SINE|Alu 59682 NR_031697 100302112 NR_031697 ENSG00000221264 MIR1284 MIRN1284|hsa-mir-1284|mir-1284 microRNA 1284 ncRNA chr12-6702 chr12 4587458 4587668 + 6.13 0.000 intron (NM_001371301, intron 2 of 14) intron (NM_001371301, intron 2 of 14) -2509 NM_003845 8798 Hs.439530 NM_003845 ENSG00000010219 DYRK4 - dual specificity tyrosine phosphorylation regulated kinase 4 protein-coding chr16-5527 chr16 24433306 24433516 + 6.13 0.000 Intergenic Intergenic -106155 NM_006910 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding chr17-6867 chr17 28052458 28052668 + 6.13 0.000 intron (NM_016231, intron 1 of 10) intron (NM_016231, intron 1 of 10) 9886 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr5-5388 chr5 134493353 134493563 + 6.13 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -13094 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LINC01843 - long intergenic non-protein coding RNA 1843 ncRNA chr3-5594 chr3 8520117 8520327 + 6.13 0.000 intron (NM_001278233, intron 1 of 4) (CA)n|Simple_repeat|Simple_repeat 18399 NM_001278233 29995 Hs.475353 NM_014583 ENSG00000071282 LMCD1 - LIM and cysteine rich domains 1 protein-coding chrX-4250 chrX 39582231 39582441 + 6.13 0.000 Intergenic LTR16E1|LTR|ERVL -78880 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr5-2773 chr5 170504068 170504278 + 6.13 0.000 5' UTR (NM_001034837, exon 1 of 9) 5' UTR (NM_001034837, exon 1 of 9) 153 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr3-9880 chr3 81839795 81840005 + 6.13 0.000 Intergenic Intergenic -78255 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr8-5088 chr8 47431732 47431942 + 6.13 0.000 intron (NM_001080394, intron 7 of 19) intron (NM_001080394, intron 7 of 19) 170899 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr4-3777 chr4 96515354 96515564 + 6.13 0.000 intron (NR_147149, intron 2 of 3) AluY|SINE|Alu 204756 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr1-3704 chr1 203499984 203500194 + 6.13 0.000 intron (NM_014359, intron 5 of 7) (CCA)n|Simple_repeat|Simple_repeat 5936 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr19-4420 chr19 3923931 3924141 + 6.13 0.000 intron (NM_033064, intron 12 of 12) (ATGG)n|Simple_repeat|Simple_repeat -9067 NM_001289117 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr5-8274 chr5 113026614 113026824 + 6.13 0.000 3' UTR (NM_002387, exon 17 of 17) 3' UTR (NM_002387, exon 17 of 17) 49921 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr10-8811 chr10 108232659 108232869 + 6.13 0.000 Intergenic Intergenic -163471 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr2-9991 chr2 17429340 17429550 + 6.13 0.000 Intergenic Intergenic 88995 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr20-4102 chr20 40901067 40901277 + 6.13 0.000 Intergenic AluJr|SINE|Alu -79541 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr18-3067 chr18 31998905 31999115 + 6.13 0.000 Intergenic MER5A|DNA|hAT-Charlie -19815 NM_017831 54941 Hs.633703 NM_017831 ENSG00000101695 RNF125 TNORS|TRAC-1|TRAC1 ring finger protein 125 protein-coding chr6-7543 chr6 70367152 70367362 + 6.13 0.000 Intergenic Intergenic -26945 NR_125857 101928353 NR_125857 EVADR - uncharacterized LOC101928353 ncRNA chr16-5706 chr16 81149596 81149806 + 6.13 0.000 non-coding (NR_126532, exon 28 of 43) non-coding (NR_126532, exon 28 of 43) 31630 NM_001278423 114780 Hs.413525 NM_052892 ENSG00000166473 PKD1L2 PC1L2 polycystin 1 like 2 (gene/pseudogene) protein-coding chr20-4360 chr20 56180397 56180607 + 6.13 0.000 Intergenic L1ME3A|LINE|L1 -68230 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr20-2993 chr20 43379580 43379790 + 6.13 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -78211 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr6-8520 chr6 159537370 159537580 + 6.13 0.000 Intergenic L1MA9|LINE|L1 153944 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA chr19-3951 chr19 55737543 55737753 + 6.13 0.000 intron (NM_176820, intron 1 of 8) FLAM_C|SINE|Alu 754 NM_176820 338321 Hs.661568 NM_176820 ENSG00000185792 NLRP9 CLR19.1|NALP9|NOD6|PAN12 NLR family pyrin domain containing 9 protein-coding chr8-5833 chr8 5618306 5618516 + 6.13 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -623497 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr5-6829 chr5 108902600 108902810 + 6.13 0.000 intron (NR_146155, intron 10 of 19) intron (NR_146155, intron 10 of 19) -21901 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr2-12638 chr2 73566428 73566638 + 6.13 0.000 intron (NM_015120, intron 15 of 22) Tigger7|DNA|TcMar-Tigger 75889 NM_003960 9027 Hs.14637 NM_003960 ENSG00000144035 NAT8 ATase2|CCNAT|CML1|GLA|Hcml1|TSC501|TSC510 N-acetyltransferase 8 (putative) protein-coding chr1-5584 chr1 3269669 3269879 + 6.13 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 141799 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr12-7746 chr12 94186877 94187087 + 6.13 0.000 intron (NM_005761, intron 4 of 30) CpG 38405 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr2-9672 chr2 31506132 31506342 + 6.13 0.000 Intergenic Intergenic 74701 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr14-4108 chr14 68871790 68872000 + 6.13 0.000 Intergenic Intergenic -75652 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr8-5502 chr8 58612140 58612350 + 6.13 0.000 intron (NM_001144772, intron 9 of 30) MER21C|LTR|ERVL 47162 NM_001144772 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr14-2972 chr14 50816468 50816678 + 6.13 0.000 intron (NM_016350, intron 3 of 28) intron (NM_016350, intron 3 of 28) -5224 NR_135258 105370489 Hs.569387 NR_135258 ENSG00000258843 LOC105370489 - uncharacterized LOC105370489 ncRNA chr22-3740 chr22 26306400 26306610 + 6.13 0.000 intron (NM_001184776, intron 6 of 14) intron (NM_001184776, intron 6 of 14) -122755 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr3-9941 chr3 89615900 89616110 + 6.13 0.000 Intergenic Intergenic 508384 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr20-3359 chr20 32615939 32616149 + 6.13 0.000 Intergenic Intergenic 28565 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr8-4608 chr8 130991235 130991445 + 6.13 0.000 intron (NM_001115, intron 1 of 17) L1ME4a|LINE|L1 49569 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr13-4439 chr13 111653385 111653595 + 6.13 0.000 Intergenic Intergenic 57481 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr2-12855 chr2 96502069 96502279 + 6.13 0.000 intron (NR_104346, intron 1 of 3) intron (NR_104346, intron 1 of 3) 3183 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding ML143365.1-1 ML143365.1 23787 23997 + 6.13 0.000 NA NA NA NA chr1-9815 chr1 59907581 59907791 + 6.13 0.000 intron (NM_000775, intron 6 of 8) intron (NM_000775, intron 6 of 8) 19087 NM_000775 1573 Hs.152096 NM_000775 ENSG00000134716 CYP2J2 CPJ2|CYPIIJ2 cytochrome P450 family 2 subfamily J member 2 protein-coding chr13-3762 chr13 43416668 43416878 + 6.13 0.000 intron (NM_001347963, intron 2 of 15) SVA_A|Retroposon|SVA -32079 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chrX-4201 chrX 35987700 35987910 + 6.13 0.000 intron (NM_001304548, intron 15 of 63) L1P3|LINE|L1 68071 NM_001304548 286464 Hs.376425 NM_152632 ENSG00000165164 CFAP47 CHDC2|CXorf22|CXorf30|CXorf59 cilia and flagella associated protein 47 protein-coding chr17-7134 chr17 76618291 76618501 + 6.13 0.000 Intergenic Intergenic 25361 NM_018414 55808 Hs.105352 NM_018414 ENSG00000070526 ST6GALNAC1 HSY11339|SIAT7A|ST6GalNAcI|STYI ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 protein-coding chr3-10181 chr3 118625759 118625969 + 6.13 0.000 intron (NR_135547, intron 2 of 3) MIRb|SINE|MIR -15904 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr6-6720 chr6 1445504 1445714 + 6.13 0.000 Intergenic LTR60B|LTR|ERV1 -55198 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr17-4065 chr17 78611892 78612102 + 6.13 0.000 Intergenic Intergenic 20060 NR_110848 101928710 Hs.464224 NR_110848 ENSG00000267123 SCAT1 LINC02081|XLOC_012582 S-phase cancer associated transcript 1 ncRNA chr9-6979 chr9 108895116 108895326 + 6.13 0.000 intron (NM_001330749, intron 23 of 34) AluJb|SINE|Alu 32955 NM_006687 10881 Hs.123530 NM_006687 ENSG00000187003 ACTL7A - actin like 7A protein-coding chr5-8778 chr5 148661851 148662061 + 6.13 0.000 Intergenic MIR|SINE|MIR -7429 NR_104445 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chrX-4015 chrX 16836023 16836233 + 6.13 0.000 intron (NM_001168683, intron 5 of 7) AluJb|SINE|Alu 33735 NM_001198719 5931 Hs.495755 NM_002893 ENSG00000102054 RBBP7 RbAp46 RB binding protein 7, chromatin remodeling factor protein-coding chr2-10483 chr2 219917952 219918162 + 6.13 0.000 Intergenic Intergenic -11492 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr13-4071 chr13 76227506 76227716 + 6.13 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -292479 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr11-6061 chr11 31787472 31787682 + 6.13 0.000 non-coding (NR_160916, exon 11 of 11) non-coding (NR_160916, exon 11 of 11) 13084 NM_001368930 5080 Hs.270303 NM_000280 ENSG00000007372 PAX6 AN|AN2|ASGD5|D11S812E|FVH1|MGDA|WAGR paired box 6 protein-coding chr5-6151 chr5 38816224 38816434 + 6.13 0.000 intron (NR_109951, intron 1 of 3) (TCACAG)n|Simple_repeat|Simple_repeat 29500 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA chr2-13805 chr2 174765645 174765855 + 6.13 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -1278 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr2-12812 chr2 90195876 90196086 + 6.13 0.000 Intergenic Intergenic -558074 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr8-6295 chr8 42714964 42715174 + 6.13 0.000 intron (NM_001347717, intron 4 of 6) L2c|LINE|L2 17693 NM_001347717 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr2-10482 chr2 219782799 219783009 + 6.13 0.000 Intergenic Intergenic 121985 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr1-10141 chr1 106591850 106592060 + 6.13 0.000 Intergenic L2|LINE|L2 -226284 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr11-5188 chr11 10262292 10262502 + 6.13 0.000 intron (NM_030962, intron 1 of 39) intron (NM_030962, intron 1 of 39) 31810 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr3-6708 chr3 134045704 134045914 + 6.13 0.000 Intergenic MER101-int|LTR|ERV1 11839 NR_135574 100507210 Hs.669052 NR_135574 ENSG00000243832 LINC02000 - long intergenic non-protein coding RNA 2000 ncRNA chr8-2314 chr8 143186428 143186638 + 6.13 0.000 Intergenic Intergenic -25879 NM_001130478 4062 Hs.159590 NM_002347 ENSG00000176956 LY6H NMLY6 lymphocyte antigen 6 family member H protein-coding chr7-4755 chr7 73424272 73424482 + 6.13 0.000 Intergenic CpG -9401 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr15-3789 chr15 68926571 68926781 + 6.13 0.000 Intergenic Intergenic -3824 NR_033672 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr6-5159 chr6 125931886 125932096 + 6.13 0.000 TTS (NM_001199619) TTS (NM_001199619) 12736 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr1-15864 chr1 181854990 181855200 + 6.13 0.000 Intergenic L1PA8A|LINE|L1 206617 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chrX-2148 chrX 35232687 35232897 + 6.13 0.000 Intergenic Intergenic 289996 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr2-11759 chr2 11665653 11665863 + 6.13 0.000 intron (NM_012344, intron 1 of 3) intron (NM_012344, intron 1 of 3) 4437 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr6-6618 chr6 150044663 150044873 + 6.13 0.000 Intergenic AluSc|SINE|Alu -19236 NM_130900 154064 Hs.558659 NM_130900 ENSG00000155918 RAET1L ULBP6 retinoic acid early transcript 1L protein-coding chr6-5976 chr6 86436966 86437176 + 6.13 0.000 Intergenic Intergenic -500457 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr8-6956 chr8 106027588 106027798 + 6.13 0.000 intron (NR_125797, intron 1 of 4) L1PA5|LINE|L1 32810 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr8-7223 chr8 126796323 126796533 + 6.13 0.000 Intergenic MLT2B3|LTR|ERVL -216726 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr3-10302 chr3 126314175 126314385 + 6.13 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 43128 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr2-8102 chr2 77183741 77183951 + 6.13 0.000 intron (NR_146416, intron 1 of 1) L1PA4|LINE|L1 197881 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr8-6876 chr8 100699376 100699586 + 6.13 0.000 Intergenic Intergenic 3543 NR_106992 102466854 NR_106992 ENSG00000284570 MIR7705 hsa-mir-7705 microRNA 7705 ncRNA chr19-5856 chr19 44703570 44703780 + 6.13 0.000 exon (NM_001039213, exon 3 of 7) exon (NM_001039213, exon 3 of 7) 4524 NM_001039213 388551 Hs.456381 NM_001039213 ENSG00000213892 CEACAM16 CEAL2|DFNA4B|DFNB113 carcinoembryonic antigen related cell adhesion molecule 16 protein-coding chr10-1956 chr10 22714520 22714730 + 6.13 0.000 promoter-TSS (NM_001330062) promoter-TSS (NM_001330062) -47 NM_005028 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr2-10269 chr2 124251929 124252139 + 6.13 0.000 intron (NM_130773, intron 3 of 23) intron (NM_130773, intron 3 of 23) 226747 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chrX-4211 chrX 36992737 36992947 + 6.13 0.000 Intergenic Intergenic -15517 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr10-4988 chr10 31132841 31133051 + 6.13 0.000 Intergenic Intergenic -54937 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr10-8877 chr10 113005864 113006074 + 6.13 0.000 intron (NM_001367943, intron 4 of 14) intron (NM_001367943, intron 4 of 14) -39386 NR_132769 106635520 NR_132769 SNORA87 - small nucleolar RNA, H/ACA box 87 snoRNA chr1-9259 chr1 24898145 24898355 + 6.13 0.000 Intergenic Intergenic 21166 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr12-4945 chr12 70242678 70242888 + 6.13 0.000 promoter-TSS (NR_037615) promoter-TSS (NR_037615) -247 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding chr15-2375 chr15 47568196 47568406 + 6.13 0.000 intron (NM_001198999, intron 3 of 19) L1M5|LINE|L1 -149204 NM_001358352 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr7-5343 chr7 29160097 29160307 + 6.13 0.000 intron (NM_001293069, intron 2 of 13) intron (NM_001293069, intron 2 of 13) 13655 NM_001293069 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr19-6256 chr19 7469840 7470050 + 6.13 0.000 exon (NM_001367824, exon 19 of 20) exon (NM_001367824, exon 19 of 20) 19090 NM_080662 92960 Hs.515100 NM_080662 ENSG00000104883 PEX11G - peroxisomal biogenesis factor 11 gamma protein-coding chr14-3114 chr14 66069015 66069225 + 6.13 0.000 Intergenic Intergenic -417251 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr8-7222 chr8 126779110 126779320 + 6.13 0.000 Intergenic LTR19B|LTR|ERV1 -220737 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr7-6891 chr7 70345882 70346092 + 6.13 0.000 intron (NM_015570, intron 4 of 18) L3|LINE|CR1 747512 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr17-7762 chr17 34904990 34905200 + 6.13 0.000 Intergenic Intergenic 56365 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr4-4296 chr4 26692040 26692250 + 6.13 0.000 intron (NM_001292054, intron 10 of 17) L1M4b|LINE|L1 108061 NM_018317 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr7-4879 chr7 112800079 112800289 + 6.13 0.000 Intergenic (TTCTGCA)n|Simple_repeat|Simple_repeat -9761 NR_109840 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding chr1-12280 chr1 230747372 230747582 + 6.13 0.000 promoter-TSS (NM_006615) promoter-TSS (NM_006615) 89 NM_006615 10753 Hs.498021 NM_006615 ENSG00000135773 CAPN9 GC36|nCL-4 calpain 9 protein-coding chr4-6673 chr4 2626224 2626434 + 6.13 0.000 intron (NM_001256668, intron 1 of 19) intron (NM_001256668, intron 1 of 19) 897 NM_003704 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr4-8268 chr4 140852913 140853123 + 6.13 0.000 Intergenic Intergenic -96633 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr10-3420 chr10 35271406 35271616 + 6.13 0.000 intron (NM_181698, intron 3 of 11) L1MCa|LINE|L1 24486 NM_181698 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr7-9147 chr7 111498633 111498843 + 6.13 0.000 intron (NM_032549, intron 2 of 5) L4_B_Mam|LINE|RTE-X 63553 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr11-9208 chr11 38055241 38055451 + 6.13 0.000 Intergenic L1PREC2|LINE|L1 116745 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr1-7172 chr1 208212581 208212791 + 6.13 0.000 intron (NM_025179, intron 2 of 31) MER63B|DNA|hAT-Blackjack 31698 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr7-5714 chr7 70443657 70443867 + 6.13 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -688382 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr6-6798 chr6 4996384 4996594 + 6.13 0.000 intron (NM_001286133, intron 4 of 6) intron (NM_001286133, intron 4 of 6) -7327 NR_126015 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr6-7002 chr6 21665014 21665224 + 6.13 0.000 Intergenic Intergenic -1294 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr3-11147 chr3 188712767 188712977 + 6.13 0.000 intron (NM_001167672, intron 6 of 9) intron (NM_001167672, intron 6 of 9) 24091 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr11-10134 chr11 89062901 89063111 + 6.13 0.000 intron (NM_000842, intron 1 of 8) intron (NM_000842, intron 1 of 8) 672 NM_000842 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr12-7348 chr12 56035148 56035358 + 6.13 0.000 exon (NM_001351090, exon 7 of 7) exon (NM_001351090, exon 7 of 7) -6665 NM_001029 6231 Hs.447562 NM_001029 ENSG00000197728 RPS26 DBA10|S26|eS26 ribosomal protein S26 protein-coding chr2-10858 chr2 61896338 61896548 + 6.13 0.000 intron (NM_001321781, intron 1 of 2) AluJo|SINE|Alu 7720 NM_001321781 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr18-2721 chr18 68968542 68968752 + 6.13 0.000 intron (NM_001093729, intron 8 of 9) L1MA10|LINE|L1 170567 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr5-4614 chr5 32321942 32322152 + 6.13 0.000 Intergenic LOR1a|LTR|ERV1 -9108 NM_001294344 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr5-8744 chr5 146377005 146377215 + 6.13 0.000 Intergenic Intergenic 38271 NM_002700 5459 Hs.553499 NM_002700 ENSG00000091010 POU4F3 BRN3C|DFNA15|DFNA42|DFNA52 POU class 4 homeobox 3 protein-coding chr3-9772 chr3 70564657 70564867 + 6.13 0.000 Intergenic L1PA17|LINE|L1 -252124 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr20-4322 chr20 52656411 52656621 + 6.13 0.000 Intergenic AluSz|SINE|Alu 35678 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA chr3-4729 chr3 64368696 64368906 + 6.13 0.000 Intergenic Intergenic -100628 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr16-5481 chr16 5600780 5600990 + 6.13 0.000 TTS (NR_110902) TTS (NR_110902) 15365 NR_110902 101926950 Hs.613285 NR_110902 ENSG00000260338 LINC01570 - long intergenic non-protein coding RNA 1570 ncRNA chr1-14512 chr1 50750269 50750479 + 6.13 0.000 intron (NM_007051, intron 4 of 18) L1ME1|LINE|L1 209893 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr10-6552 chr10 73018213 73018423 + 6.13 0.000 intron (NM_001017962, intron 10 of 14) L1M2a|LINE|L1 -63512 NM_001318125 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chr10-7325 chr10 203570 203780 + 6.13 0.000 intron (NM_001370123, intron 3 of 12) intron (NM_001370123, intron 3 of 12) 23681 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr12-6791 chr12 10143874 10144084 + 6.13 0.000 Intergenic L1MEc|LINE|L1 -13710 NM_197947 64581 Hs.143929 NM_022570 ENSG00000172243 CLEC7A BGR|CANDF4|CD369|CLECSF12|DECTIN1|SCARE2 C-type lectin domain containing 7A protein-coding chr1-13884 chr1 21681643 21681853 + 6.13 0.000 intron (NM_001350167, intron 25 of 26) intron (NM_001350167, intron 25 of 26) -12391 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr5-4454 chr5 5581960 5582170 + 6.13 0.000 Intergenic Intergenic 159388 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr15-3076 chr15 62497528 62497738 + 6.13 0.000 Intergenic Intergenic 147548 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr7-8335 chr7 42617872 42618082 + 6.13 0.000 Intergenic Intergenic 88470 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr14-2197 chr14 100640690 100640900 + 6.13 0.000 Intergenic Intergenic -16473 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chrX-942 chrX 47760064 47760274 + 6.13 0.000 Intergenic L1ME4a|LINE|L1 52978 NR_033924 392459 Hs.562045 NR_033924 ENSG00000187893 CXXC1P1 CXorf25|NCRNA00236 CXXC finger protein 1 pseudogene 1 pseudo chr16-5729 chr16 84439412 84439622 + 6.13 0.000 exon (NM_001286527, exon 13 of 28) exon (NM_001286527, exon 13 of 28) 27844 NR_146503 105371374 Hs.610979 NR_146503 ENSG00000261286 ATP2C2-AS1 - ATP2C2 antisense RNA 1 ncRNA chr7-9187 chr7 115877136 115877346 + 6.13 0.000 Intergenic AluJb|SINE|Alu 91072 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr12-6521 chr12 109291266 109291476 + 6.13 0.000 intron (NM_213596, intron 2 of 9) intron (NM_213596, intron 2 of 9) 17913 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chrX-4125 chrX 26629863 26630073 + 6.13 0.000 Intergenic L1PA15|LINE|L1 71631 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr3-7485 chr3 143171651 143171861 + 6.13 0.000 Intergenic Intergenic 51985 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr11-6201 chr11 45888209 45888419 + 6.13 0.000 intron (NM_005456, intron 1 of 11) MIR|SINE|MIR 2663 NM_005456 9479 Hs.234249 NM_005456 ENSG00000121653 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding chr7-4117 chr7 45828577 45828787 + 6.13 0.000 Intergenic Intergenic 23453 NR_146388 730234 Hs.714106 NR_146388 LOC730234 - uncharacterized LOC730234 ncRNA chr22-1510 chr22 43353125 43353335 + 6.13 0.000 Intergenic AluJr|SINE|Alu -9858 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr11-8073 chr11 34332619 34332829 + 6.13 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 25286 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr10-6528 chr10 68782932 68783142 + 6.13 0.000 intron (NR_104262, intron 18 of 23) AluJr|SINE|Alu 27865 NR_003076 692211 NR_003076 ENSG00000283551 SNORD98 HBII-419 small nucleolar RNA, C/D box 98 snoRNA chr15-5079 chr15 86615679 86615889 + 6.13 0.000 intron (NM_152336, intron 22 of 24) intron (NM_152336, intron 22 of 24) -298816 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr2-14053 chr2 196055012 196055222 + 6.13 0.000 intron (NM_018897, intron 2 of 64) AluJb|SINE|Alu 13720 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chrX-4679 chrX 83914359 83914569 + 6.13 0.000 Intergenic L1MB1|LINE|L1 53318 NM_021118 1538 Hs.444230 NM_021118 ENSG00000183035 CYLC1 CYCL1 cylicin 1 protein-coding chr13-4330 chr13 101786680 101786890 + 6.13 0.000 intron (NM_175929, intron 3 of 4) intron (NM_175929, intron 3 of 4) 129860 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr13-3882 chr13 51830308 51830518 + 6.13 0.000 intron (NM_001351003, intron 2 of 4) MIR|SINE|MIR 14764 NM_001351003 283521 Hs.649896 NM_178515 ENSG00000281106 TMEM272 LINC00282|NCRNA00282 transmembrane protein 272 protein-coding chr4-3367 chr4 8074712 8074922 + 6.13 0.000 intron (NM_001130084, intron 6 of 19) AluSg|SINE|Alu -2829 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr11-5304 chr11 46122224 46122434 + 6.13 0.000 Intergenic Intergenic -1344 NM_001352025 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr9-4902 chr9 6944177 6944387 + 6.13 0.000 intron (NR_148680, intron 8 of 21) intron (NR_148680, intron 8 of 21) 186932 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr5-8003 chr5 86368910 86369120 + 6.13 0.000 Intergenic LTR16B2|LTR|ERVL 86571 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr1-16724 chr1 248620608 248620818 + 6.13 0.000 Intergenic MER4B|LTR|ERV1 6415 NM_001001964 127077 Hs.626619 NM_001001964 ENSG00000279301 OR2T11 OR2T11Q olfactory receptor family 2 subfamily T member 11 (gene/pseudogene) protein-coding chr4-8502 chr4 160704398 160704608 + 6.13 0.000 Intergenic L1PA5|LINE|L1 -926719 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr4-4930 chr4 124499241 124499451 + 6.13 0.000 TTS (NR_110838) TTS (NR_110838) 59088 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr11-5020 chr11 78263658 78263868 + 6.13 0.000 intron (NM_012296, intron 2 of 9) MIR3|SINE|MIR 74844 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr17-7457 chr17 14206369 14206579 + 6.13 0.000 intron (NM_001303, intron 6 of 6) MER20B|DNA|hAT-Charlie 30388 NM_001348781 146822 Hs.447556 NM_001007530 ENSG00000223510 CDRT15 - CMT1A duplicated region transcript 15 protein-coding chr6-5060 chr6 114096421 114096631 + 6.13 0.000 intron (NR_125845, intron 5 of 9) intron (NR_125845, intron 5 of 9) -33649 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr14-2304 chr14 72121580 72121790 + 6.13 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 188158 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr6-4953 chr6 102600696 102600906 + 6.13 0.000 Intergenic Intergenic 1201816 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr11-10628 chr11 125377383 125377593 + 6.13 0.000 intron (NM_022062, intron 5 of 12) intron (NM_022062, intron 5 of 12) -117726 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr1-14131 chr1 31660708 31660918 + 6.13 0.000 intron (NM_001856, intron 61 of 70) intron (NM_001856, intron 61 of 70) -15937 NM_012392 553115 Hs.470417 NM_012392 ENSG00000162517 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding chr6-6064 chr6 136700835 136701045 + 6.13 0.000 intron (NM_005923, intron 3 of 29) intron (NM_005923, intron 3 of 29) 71826 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr4-8625 chr4 173132178 173132388 + 6.13 0.000 non-coding (NR_134242, exon 7 of 7) non-coding (NR_134242, exon 7 of 7) -36528 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr11-9108 chr11 32596622 32596832 + 6.13 0.000 intron (NM_006360, intron 8 of 10) AluSz|SINE|Alu 12896 NM_006360 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr20-3619 chr20 6819690 6819900 + 6.13 0.000 Intergenic Intergenic 52109 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr12-7761 chr12 95162966 95163176 + 6.13 0.000 intron (NM_018351, intron 3 of 20) intron (NM_018351, intron 3 of 20) 54396 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding chr6-3580 chr6 71056990 71057200 + 6.13 0.000 Intergenic Intergenic -100035 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr5-7545 chr5 38420685 38420895 + 6.13 0.000 intron (NM_182798, intron 7 of 16) intron (NM_182798, intron 7 of 16) 17249 NM_182798 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr2-10224 chr2 109004122 109004332 + 6.13 0.000 Intergenic Intergenic -15007 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr20-3777 chr20 20951313 20951523 + 6.13 0.000 Intergenic Intergenic 154940 NR_147212 105372556 Hs.371339 NR_147212 ENSG00000225127 LINC00237 NCRNA00237 long intergenic non-protein coding RNA 237 ncRNA chr9-4640 chr9 113668125 113668335 + 6.13 0.000 Intergenic L1ME5|LINE|L1 74101 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr8-7239 chr8 127748087 127748297 + 6.13 0.000 Intergenic Intergenic 11961 NM_002467 4609 Hs.202453 NM_002467 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc MYC proto-oncogene, bHLH transcription factor protein-coding chr17-8346 chr17 73620792 73621002 + 6.13 0.000 intron (NM_001144952, intron 1 of 44) L1MB5|LINE|L1 23548 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chr15-4428 chr15 45080672 45080882 + 6.13 0.000 Intergenic Intergenic 33384 NM_014080 50506 Hs.71377 NM_014080 ENSG00000140279 DUOX2 LNOX2|NOXEF2|P138-TOX|TDH6|THOX2 dual oxidase 2 protein-coding chr5-7426 chr5 28926688 28926898 + 6.13 0.000 promoter-TSS (NR_033961) promoter-TSS (NR_033961) -77 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo chr22-2617 chr22 32557626 32557836 + 6.13 0.000 intron (NM_003490, intron 7 of 13) L2c|LINE|L2 82494 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr5-4086 chr5 65126780 65126990 + 6.13 0.000 Intergenic Intergenic 355035 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr17-7977 chr17 48299198 48299408 + 6.13 0.000 intron (NR_131239, intron 2 of 2) intron (NR_131239, intron 2 of 2) 4956 NR_131239 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr22-4257 chr22 48439738 48439948 + 6.13 0.000 Intergenic Intergenic -49710 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr3-8347 chr3 76158478 76158688 + 6.13 0.000 Intergenic Intergenic -373034 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr9-4426 chr9 13299495 13299705 + 6.13 0.000 Intergenic AluJr|SINE|Alu -19887 NM_001330637 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr14-1778 chr14 101628447 101628657 + 6.13 0.000 Intergenic CpG 67201 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr2-11371 chr2 209956439 209956649 + 6.13 0.000 intron (NM_032504, intron 47 of 63) MLT1E2|LTR|ERVL-MaLR -46021 NM_001278283 6120 Hs.282260 NM_006916 ENSG00000197713 RPE RPE2-1 ribulose-5-phosphate-3-epimerase protein-coding chr9-7400 chr9 20183008 20183218 + 6.13 0.000 Intergenic Intergenic 228125 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr12-6219 chr12 26993162 26993372 + 6.13 0.000 intron (NM_016551, intron 5 of 11) intron (NM_016551, intron 5 of 11) 21117 NM_016551 51768 Hs.438641 NM_016551 ENSG00000064115 TM7SF3 - transmembrane 7 superfamily member 3 protein-coding chr9-5760 chr9 127465001 127465211 + 6.13 0.000 intron (NM_001190723, intron 9 of 24) MIRb|SINE|MIR 12851 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr18-3507 chr18 74304162 74304372 + 6.13 0.000 Intergenic MER44C|DNA|TcMar-Tigger -11572 NM_001174123 644041 Hs.465414 NM_001174123 ENSG00000206043 C18orf63 DKFZP781G0119 chromosome 18 open reading frame 63 protein-coding chr2-8330 chr2 107716127 107716337 + 6.13 0.000 Intergenic Intergenic -37880 NR_126370 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chr6-5534 chr6 168059513 168059723 + 6.13 0.000 intron (NR_110312, intron 13 of 15) intron (NR_110312, intron 13 of 15) 16217 NM_001122841 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr10-6665 chr10 104190794 104191004 + 6.13 0.000 intron (NM_025145, intron 12 of 37) MIR|SINE|MIR 27984 NR_030340 693194 NR_030340 ENSG00000208033 MIR609 MIRN609|hsa-mir-609 microRNA 609 ncRNA chr4-8522 chr4 162858034 162858244 + 6.13 0.000 Intergenic Intergenic 235489 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr12-7308 chr12 54004928 54005138 + 6.13 0.000 Intergenic Intergenic -3952 NM_022658 3224 Hs.664500 NM_022658 ENSG00000037965 HOXC8 HOX3|HOX3A homeobox C8 protein-coding chr11-6033 chr11 26778514 26778724 + 6.13 0.000 Intergenic Intergenic -56559 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr17-8342 chr17 73551699 73551909 + 6.13 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 38121 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr5-6323 chr5 131079747 131079957 + 6.13 0.000 Intergenic L1MCa|LINE|L1 85404 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr10-7599 chr10 20065155 20065365 + 6.13 0.000 intron (NM_032812, intron 3 of 13) L2|LINE|L2 248828 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr4-8356 chr4 147813675 147813885 + 6.13 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) 31185 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr17-8357 chr17 74116504 74116714 + 6.13 0.000 Intergenic MER20B|DNA|hAT-Charlie -87069 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr7-8566 chr7 62796870 62797080 + 6.13 0.000 Intergenic ALR/Alpha|Satellite|centr 507081 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr7-8722 chr7 75822474 75822684 + 6.13 0.000 intron (NM_001371193, intron 1 of 3) AluSx1|SINE|Alu 793 NM_001371193 chr21-1849 chr21 41772158 41772368 + 6.13 0.000 Intergenic Intergenic -5211 NM_020639 54101 Hs.517310 NM_020639 ENSG00000183421 RIPK4 ANKK2|ANKRD3|CHANDS|DIK|NKRD3|PKK|PPS2|RIP4 receptor interacting serine/threonine kinase 4 protein-coding chr11-9882 chr11 74404281 74404491 + 6.13 0.000 Intergenic Intergenic 5149 NR_039710 100616215 NR_039710 ENSG00000264402 MIR548AL - microRNA 548al ncRNA chr19-7054 chr19 52242037 52242247 + 6.13 0.000 Intergenic Intergenic 20122 NR_106859 102466984 NR_106859 ENSG00000274380 MIR6801 hsa-mir-6801 microRNA 6801 ncRNA chr16-6562 chr16 65482090 65482300 + 6.13 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 94105 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr19-5103 chr19 55755393 55755603 + 6.13 0.000 Intergenic L1PA15|LINE|L1 -3643 NM_001145014 342931 Hs.631553 NM_001145014 ENSG00000223638 RFPL4A RFPL4|RNF210 ret finger protein like 4A protein-coding chr1-9303 chr1 26825358 26825568 + 6.13 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -1225 NM_032283 84243 Hs.523710 NM_032283 ENSG00000204160 ZDHHC18 DHHC-18|DHHC18 zinc finger DHHC-type containing 18 protein-coding chr16-5696 chr16 76280821 76281031 + 6.13 0.000 intron (NR_136213, intron 1 of 23) intron (NR_136213, intron 1 of 23) 3525 NM_001322188 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding chr3-11144 chr3 188544048 188544258 + 6.13 0.000 intron (NM_001167672, intron 4 of 9) MIR3|SINE|MIR 24513 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr7-7567 chr7 121006395 121006605 + 6.13 0.000 intron (NM_001105533, intron 1 of 17) GA-rich|Low_complexity|Low_complexity 17109 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr5-6097 chr5 16120642 16120852 + 6.13 0.000 intron (NM_001102562, intron 2 of 3) MLT1H|LTR|ERVL-MaLR 59044 NM_001102562 441061 Hs.662216 NM_001102562 ENSG00000183654 MARCH11 MARCH-XI|RNF226 membrane associated ring-CH-type finger 11 protein-coding chr12-5898 chr12 57299478 57299688 + 6.13 0.000 intron (NM_001351215, intron 4 of 22) intron (NM_001351215, intron 4 of 22) 42191 NM_001351208 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr4-7375 chr4 60693360 60693570 + 6.13 0.000 Intergenic L1PA8A|LINE|L1 -229154 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr5-7709 chr5 58081078 58081288 + 6.13 0.000 Intergenic L2c|LINE|L2 41158 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr5-6277 chr5 107696403 107696613 + 6.01 0.000 Intergenic Intergenic -25571 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr2-10302 chr2 137818460 137818670 + 6.01 0.000 Intergenic AluJo|SINE|Alu 109367 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr8-7389 chr8 139198421 139198631 + 6.01 0.000 Intergenic AluSx4|SINE|Alu -284485 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr5-7079 chr5 175855865 175856075 + 6.01 0.000 intron (NM_006650, intron 2 of 4) intron (NM_006650, intron 2 of 4) -15608 NM_001008220 10814 Hs.193235 NM_006650 ENSG00000145920 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding chr17-7261 chr17 2640802 2641012 + 6.01 0.000 intron (NM_000430, intron 2 of 10) L1MC4|LINE|L1 47253 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr8-4268 chr8 93906436 93906646 + 6.01 0.000 Intergenic Intergenic 9578 NR_039602 100616169 NR_039602 ENSG00000284288 MIR378D2 mir-378d-2 microRNA 378d-2 ncRNA chr4-3284 chr4 139781485 139781695 + 6.01 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 115771 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr10-7678 chr10 28595598 28595808 + 6.01 0.000 intron (NM_100486, intron 6 of 12) intron (NM_100486, intron 6 of 12) 62585 NM_100486 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr6-1653 chr6 144150431 144150641 + 6.01 0.000 promoter-TSS (NM_003764) promoter-TSS (NM_003764) 19 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding chr8-5386 chr8 23951032 23951242 + 6.01 0.000 Intergenic Intergenic -96331 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr1-16499 chr1 229726245 229726455 + 6.01 0.000 Intergenic Intergenic 100103 NM_014777 9816 Hs.533628 NM_014777 ENSG00000135763 URB2 KIAA0133|NET10|NPA2 URB2 ribosome biogenesis homolog protein-coding chr16-5242 chr16 31268538 31268748 + 6.01 0.000 intron (NM_001145808, intron 5 of 29) L2|LINE|L2 8668 NM_000632 3684 Hs.172631 NM_000632 ENSG00000169896 ITGAM CD11B|CR3A|MAC-1|MAC1A|MO1A|SLEB6 integrin subunit alpha M protein-coding chr17-5969 chr17 76946138 76946348 + 6.01 0.000 intron (NM_144677, intron 14 of 16) intron (NM_144677, intron 14 of 16) 22956 NR_136416 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr2-11255 chr2 174199440 174199650 + 6.01 0.000 intron (NM_001011708, intron 3 of 9) Charlie1a|DNA|hAT-Charlie 48987 NM_001011708 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr1-8636 chr1 202203505 202203715 + 6.01 0.000 promoter-TSS (NM_021636) promoter-TSS (NM_021636) -102 NM_021636 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr3-10785 chr3 158934535 158934745 + 6.01 0.000 Intergenic MER5A|DNA|hAT-Charlie 132586 NR_110328 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr17-8052 chr17 50955743 50955953 + 6.01 0.000 Intergenic Intergenic -87870 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr7-3116 chr7 43862299 43862509 + 6.01 0.000 Intergenic HERVK9-int|LTR|ERVK 7113 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chrX-4843 chrX 103517351 103517561 + 6.01 0.000 5' UTR (NM_080879, exon 2 of 3) 5' UTR (NM_080879, exon 2 of 3) 2033 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chr8-4837 chr8 27611545 27611755 + 6.01 0.000 promoter-TSS (NR_038335) promoter-TSS (NR_038335) 101 NR_045494 1191 Hs.436657 NM_001831 ENSG00000120885 CLU AAG4|APO-J|APOJ|CLI|CLU1|CLU2|KUB1|NA1/NA2|SGP-2|SGP2|SP-40|TRPM-2|TRPM2 clusterin protein-coding chr1-13319 chr1 240053174 240053384 + 6.01 0.000 Intergenic Intergenic -38604 NM_020066 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr17-4488 chr17 66971104 66971314 + 6.01 0.000 intron (NM_014405, intron 1 of 3) intron (NM_014405, intron 1 of 3) 6502 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr17-6629 chr17 64108104 64108314 + 6.01 0.000 intron (NM_001433, intron 1 of 21) intron (NM_001433, intron 1 of 21) 21935 NM_001433 2081 Hs.133982 NM_001433 ENSG00000178607 ERN1 IRE1|IRE1P|IRE1a|hIRE1p endoplasmic reticulum to nucleus signaling 1 protein-coding chr11-3443 chr11 65127924 65128134 + 6.01 0.000 TTS (NR_037567) TTS (NR_037567) 1949 NR_106809 102465449 NR_106809 ENSG00000284489 MIR6751 hsa-mir-6751 microRNA 6751 ncRNA chr3-6859 chr3 150860288 150860498 + 6.01 0.000 Intergenic HERV17-int|LTR|ERV1 45046 NM_001351281 646951 Hs.380222 NM_001351281 MINDY4B C3orf76|FAM188B2 MINDY family member 4B protein-coding chr14-5262 chr14 99872964 99873174 + 6.01 0.000 intron (NM_004434, intron 3 of 21) intron (NM_004434, intron 3 of 21) 79656 NM_001008707 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr12-5205 chr12 105522552 105522762 + 6.01 0.000 Intergenic Intergenic -181546 NR_110108 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr9-8962 chr9 138181508 138181718 + 6.01 0.000 Intergenic L1MB4|LINE|L1 21840 NR_135133 101928932 Hs.586416 NR_135133 ENSG00000237419 LOC101928932 - uncharacterized LOC101928932 ncRNA chr16-2647 chr16 29119621 29119831 + 6.01 0.000 Intergenic AluJb|SINE|Alu 44884 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr8-5707 chr8 127447563 127447773 + 6.01 0.000 intron (NR_024393, intron 4 of 4) intron (NR_024393, intron 4 of 4) 31843 NM_001159542 5462 Hs.450254 NM_001159542 ENSG00000212993 POU5F1B OCT4-PG1|OCT4PG1|OTF3C|OTF3P1|POU5F1P1|POU5F1P4|POU5FLC20|POU5FLC8 POU class 5 homeobox 1B protein-coding chr13-3158 chr13 99791525 99791735 + 6.01 0.000 intron (NR_120421, intron 1 of 4) MIR|SINE|MIR -62629 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr1-16545 chr1 233342454 233342664 + 6.01 0.000 intron (NM_032435, intron 1 of 9) intron (NM_032435, intron 1 of 9) 14835 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr9-6726 chr9 8858001 8858211 + 6.01 0.000 promoter-TSS (NR_121599) promoter-TSS (NR_121599) 88 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr20-4179 chr20 45173690 45173900 + 6.01 0.000 Intergenic Intergenic -1107 NM_002638 5266 Hs.112341 NM_002638 ENSG00000124102 PI3 ESI|SKALP|WAP3|WFDC14|cementoin peptidase inhibitor 3 protein-coding chr11-7289 chr11 43637058 43637268 + 6.01 0.000 Intergenic Intergenic -43575 NM_016142 51144 Hs.132513 NM_016142 ENSG00000149084 HSD17B12 KAR|SDR12C1 hydroxysteroid 17-beta dehydrogenase 12 protein-coding chr9-4225 chr9 76292552 76292762 + 6.01 0.000 intron (NM_001190482, intron 25 of 36) intron (NM_001190482, intron 25 of 36) 101769 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr10-3658 chr10 100779335 100779545 + 6.01 0.000 intron (NM_003988, intron 3 of 10) intron (NM_003988, intron 3 of 10) 33729 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr8-4880 chr8 67946900 67947110 + 6.01 0.000 Intergenic Intergenic -5041 NM_024870 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr3-10874 chr3 169348232 169348442 + 6.01 0.000 intron (NM_001205194, intron 1 of 15) MARNA|DNA|TcMar-Mariner -99530 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr20-4310 chr20 51482715 51482925 + 6.01 0.000 intron (NM_012340, intron 3 of 10) intron (NM_012340, intron 3 of 10) -29843 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr6-3061 chr6 72554877 72555087 + 6.01 0.000 Intergenic MIR|SINE|MIR -66861 NM_001160130 56479 Hs.445324 NM_019842 ENSG00000185760 KCNQ5 Kv7.5|MRD46 potassium voltage-gated channel subfamily Q member 5 protein-coding chr2-11228 chr2 164070565 164070775 + 6.01 0.000 Intergenic Intergenic -334662 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr19-4188 chr19 42568350 42568560 + 6.01 0.000 intron (NR_073180, intron 2 of 2) intron (NR_073180, intron 2 of 2) 26469 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr4-5434 chr4 16398128 16398338 + 6.01 0.000 Intergenic MER3|DNA|hAT-Charlie 171570 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr8-2099 chr8 135193539 135193749 + 6.01 0.000 Intergenic Intergenic -40487 NR_120396 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA chr5-8775 chr5 148517473 148517683 + 6.01 0.000 intron (NM_001040172, intron 4 of 5) L2a|LINE|L2 119483 NM_001040169 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr1-9856 chr1 65021192 65021402 + 6.01 0.000 intron (NM_001321853, intron 2 of 26) intron (NM_001321853, intron 2 of 26) -18821 NR_119383 101927084 Hs.734218 NR_119383 ENSG00000226891 LINC01359 - long intergenic non-protein coding RNA 1359 ncRNA chr6-3907 chr6 69026142 69026352 + 6.01 0.000 intron (NM_001704, intron 13 of 31) L2a|LINE|L2 390965 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr11-10551 chr11 120877257 120877467 + 6.01 0.000 intron (NM_001282470, intron 10 of 19) L2b|LINE|L2 17435 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr9-8005 chr9 94084458 94084668 + 6.01 0.000 promoter-TSS (NM_001253829) promoter-TSS (NM_001253829) 99 NM_001253829 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding chr12-5134 chr12 98833011 98833221 + 6.01 0.000 intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) 61658 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chrX-2240 chrX 45952124 45952334 + 6.01 0.000 Intergenic Intergenic -100739 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr5-8258 chr5 111720773 111720983 + 6.01 0.000 intron (NR_040093, intron 2 of 6) intron (NR_040093, intron 2 of 6) 35373 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr8-3306 chr8 27928057 27928267 + 6.01 0.000 intron (NM_173833, intron 3 of 8) intron (NM_173833, intron 3 of 8) -42046 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr20-4173 chr20 44924189 44924399 + 6.01 0.000 intron (NR_134983, intron 7 of 13) intron (NR_134983, intron 7 of 13) -7268 NR_134985 80336 Hs.641481 NM_001124756 ENSG00000101104 PABPC1L C20orf119|EPAB|PABPC1L1|dJ1069P2.3 poly(A) binding protein cytoplasmic 1 like protein-coding chr19-3943 chr19 50668096 50668306 + 6.01 0.000 exon (NM_016148, exon 23 of 24) exon (NM_016148, exon 23 of 24) 18756 NM_001195076 342918 Hs.531650 NM_001195076 ENSG00000235034 C19orf81 - chromosome 19 open reading frame 81 protein-coding chr8-6772 chr8 92812226 92812436 + 6.01 0.000 Intergenic Intergenic -26271 NR_046114 441369 Hs.521683 NR_046114 ENSG00000248858 FLJ46284 - uncharacterized LOC441369 ncRNA chr15-5042 chr15 84120933 84121143 + 6.01 0.000 intron (NR_036652, intron 7 of 9) intron (NR_036652, intron 7 of 9) 40851 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr10-7286 chr10 130619570 130619780 + 6.01 0.000 Intergenic Intergenic 342993 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr9-5362 chr9 90349332 90349542 + 6.01 0.000 intron (NR_109795, intron 2 of 2) L1PA15|LINE|L1 84052 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr13-2485 chr13 51808169 51808379 + 6.01 0.000 Intergenic MIR|SINE|MIR -4111 NM_001031719 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr9-8647 chr9 129522777 129522987 + 6.01 0.000 Intergenic LTR16E1|LTR|ERVL 34222 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr10-5199 chr10 60919782 60919992 + 6.01 0.000 intron (NM_001350908, intron 2 of 11) intron (NM_001350908, intron 2 of 11) 24298 NM_014836 9886 Hs.737374 NM_014836 ENSG00000072422 RHOBTB1 - Rho related BTB domain containing 1 protein-coding chr5-7312 chr5 15367573 15367783 + 6.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR -101118 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr21-1496 chr21 41658599 41658809 + 6.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -20598 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr4-2825 chr4 41491494 41491704 + 6.01 0.000 intron (NM_001289122, intron 1 of 25) SVA_A|Retroposon|SVA -46558 NM_001330672 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr1-10425 chr1 158120854 158121064 + 6.01 0.000 Intergenic Intergenic 19681 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr1-16539 chr1 232562084 232562294 + 6.01 0.000 Intergenic Intergenic -46581 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr1-5859 chr1 1518389 1518599 + 6.01 0.000 intron (NM_001170536, intron 4 of 15) (AC)n|Simple_repeat|Simple_repeat 5964 NM_001170536 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr11-5030 chr11 84922072 84922282 + 6.01 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) 1244 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr3-6915 chr3 157388232 157388442 + 6.01 0.000 intron (NM_024621, intron 6 of 13) intron (NM_024621, intron 6 of 13) -48513 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr4-8351 chr4 147674605 147674815 + 6.01 0.000 intron (NM_001350144, intron 1 of 10) Charlie10|DNA|hAT-Charlie 9453 NM_138364 90826 Hs.591692 NM_138364 ENSG00000164169 PRMT9 PRMT10 protein arginine methyltransferase 9 protein-coding chr11-4268 chr11 65811070 65811280 + 6.01 0.000 Intergenic Intergenic -20307 NR_108085 101927828 Hs.666246 NR_108085 ENSG00000255120 OVOL1-AS1 - OVOL1 antisense RNA 1 ncRNA chr12-7266 chr12 52258534 52258744 + 6.01 0.000 promoter-TSS (NR_146088) promoter-TSS (NR_146088) -131 NR_146088 85349 Hs.584773 NR_146088 ENSG00000135477 KRT87P HBD|KRT121P|KRTHBP4|psihHbD keratin 87 pseudogene pseudo chr8-6067 chr8 25901142 25901352 + 6.01 0.000 intron (NM_022659, intron 7 of 15) AluJb|SINE|Alu 144166 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr4-3361 chr4 7286120 7286330 + 6.01 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -24225 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr12-6667 chr12 2858323 2858533 + 6.01 0.000 3' UTR (NM_021953, exon 9 of 9) 3' UTR (NM_021953, exon 9 of 9) -1389 NM_001365175 101929469 Hs.634625 NM_001365174 ENSG00000283297 TEX52 - testis expressed 52 protein-coding chr17-8128 chr17 58138373 58138583 + 6.01 0.000 Intergenic HAL1M8|LINE|L1 -16676 NM_012374 26689 Hs.531188 NM_012374 ENSG00000141194 OR4D1 OR17-23|OR4D3|OR4D4P|TPCR16 olfactory receptor family 4 subfamily D member 1 protein-coding chr11-9792 chr11 69949299 69949509 + 6.01 0.000 Intergenic Intergenic 114520 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr21-1437 chr21 26235238 26235448 + 6.01 0.000 Intergenic Intergenic -64215 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr11-6774 chr11 86792131 86792341 + 6.01 0.000 intron (NM_001293180, intron 1 of 1) LTR33|LTR|ERVL 1165 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr16-6552 chr16 64900284 64900494 + 6.01 0.000 Intergenic Intergenic 221674 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr17-6796 chr17 5723804 5724014 + 6.01 0.000 Intergenic L1MEc|LINE|L1 -48325 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr2-11967 chr2 26911417 26911627 + 6.01 0.000 intron (NM_020134, intron 2 of 12) intron (NM_020134, intron 2 of 12) -59115 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr5-5998 chr5 138567618 138567828 + 6.01 0.000 intron (NM_004134, intron 5 of 16) intron (NM_004134, intron 5 of 16) -6613 NR_002913 26785 NR_002913 ENSG00000206989 SNORD63 RNU63|SNORD63A|U63 small nucleolar RNA, C/D box 63 snoRNA chr9-6048 chr9 136592980 136593190 + 6.01 0.000 Intergenic Intergenic 24096 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr4-7217 chr4 42357584 42357794 + 6.01 0.000 intron (NR_134668, intron 1 of 1) AluSq2|SINE|Alu 33579 NR_134668 105374428 Hs.245131 NR_134668 ENSG00000250781 LOC105374428 - uncharacterized LOC105374428 ncRNA chr22-3632 chr22 21741097 21741307 + 6.01 0.000 Intergenic Intergenic -5408 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr2-10035 chr2 28356794 28357004 + 6.01 0.000 Intergenic Intergenic -35959 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr7-4592 chr7 15602087 15602297 + 6.01 0.000 Intergenic Intergenic -40177 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chr15-1711 chr15 78194503 78194713 + 6.01 0.000 exon (NM_001199377, exon 3 of 14) exon (NM_001199377, exon 3 of 14) 39957 NM_015162 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr3-6485 chr3 111620030 111620240 + 6.01 0.000 intron (NR_134917, intron 8 of 14) L2a|LINE|L2 -24789 NM_024508 79413 Hs.136912 NM_024508 ENSG00000177494 ZBED2 - zinc finger BED-type containing 2 protein-coding chr11-7519 chr11 8321282 8321492 + 6.01 0.000 Intergenic Intergenic -52600 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr11-9232 chr11 41308533 41308743 + 6.01 0.000 intron (NM_001258419, intron 1 of 6) LTR88b|LTR|Gypsy? 150998 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr20-3123 chr20 33332739 33332949 + 6.01 0.000 Intergenic Intergenic 49630 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr21-1151 chr21 41371652 41371862 + 6.01 0.000 intron (NM_002463, intron 1 of 13) intron (NM_002463, intron 1 of 13) 9730 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding chr6-7476 chr6 57741922 57742132 + 6.01 0.000 Intergenic L1MA8|LINE|L1 194902 NR_133000 375513 Hs.561539 NM_206908 GUSBP4 C6orf216|GUSBL2|SMA3-L|SMAC3L GUSB pseudogene 4 pseudo chr20-2632 chr20 42631014 42631224 + 6.01 0.000 intron (NM_133170, intron 7 of 31) intron (NM_133170, intron 7 of 31) -54364 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr3-9094 chr3 28084421 28084631 + 6.01 0.000 Intergenic Intergenic -157093 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr4-5592 chr4 184503211 184503421 + 6.01 0.000 Intergenic AluJb|SINE|Alu -28766 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr4-7799 chr4 97997189 97997399 + 6.01 0.000 intron (NM_174952, intron 5 of 10) MSTA|LTR|ERVL-MaLR 146182 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr7-3506 chr7 5317090 5317300 + 6.01 0.000 intron (NM_001080495, intron 24 of 29) intron (NM_001080495, intron 24 of 29) 34252 NM_001040661 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr2-10365 chr2 170282629 170282839 + 6.01 0.000 intron (NM_001083615, intron 7 of 33) L1M2b|LINE|L1 68209 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr16-6184 chr16 25931415 25931625 + 6.01 0.000 intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) -93717 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr7-6818 chr7 35955404 35955614 + 6.01 0.000 Intergenic Intergenic -139801 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chrX-4239 chrX 38883155 38883365 + 6.01 0.000 Intergenic Intergenic -79377 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr6-7638 chr6 80214441 80214651 + 6.01 0.000 intron (NR_134945, intron 9 of 10) intron (NR_134945, intron 9 of 10) 107875 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chrX-4990 chrX 117619998 117620208 + 6.01 0.000 Intergenic L1PA7|LINE|L1 353635 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr2-10002 chr2 21687799 21688009 + 6.01 0.000 non-coding (NR_038837, exon 3 of 3) non-coding (NR_038837, exon 3 of 3) 22748 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr3-7103 chr3 181720117 181720327 + 6.01 0.000 intron (NR_075091, intron 7 of 7) intron (NR_075091, intron 7 of 7) 8297 NM_003106 6657 Hs.518438 NM_003106 ENSG00000181449 SOX2 ANOP3|MCOPS3 SRY-box transcription factor 2 protein-coding chr1-13649 chr1 10888497 10888707 + 6.01 0.000 Intergenic CpG 78085 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr16-5392 chr16 88548379 88548589 + 6.01 0.000 Intergenic Intergenic 13499 NR_146877 400555 Hs.120392 NM_001001682 ZC3H18-AS1 C16orf85|LINC00859 ZC3H18 antisense RNA 1 (head to head) ncRNA chr1-14932 chr1 85691122 85691332 + 6.01 0.000 intron (NM_017953, intron 5 of 9) intron (NM_017953, intron 5 of 9) 17206 NM_001170670 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding GL000216.2-14 GL000216.2 173854 174064 + 6.01 0.000 NA NA NA NA chr11-9105 chr11 32455665 32455875 + 6.01 0.000 intron (NR_120548, intron 3 of 4) AluSx|SINE|Alu 19731 NR_120546 51352 Hs.567499 NM_015855 ENSG00000183242 WT1-AS WIT-1|WIT1|WT1-AS1|WT1AS WT1 antisense RNA ncRNA chr1-15632 chr1 162702908 162703118 + 6.01 0.000 intron (NM_006182, intron 2 of 17) L2a|LINE|L2 70549 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr18-1234 chr18 48094152 48094362 + 6.01 0.000 intron (NM_001371291, intron 4 of 6) intron (NM_001371291, intron 4 of 6) 42891 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr2-14621 chr2 234412804 234413014 + 6.01 0.000 Intergenic Intergenic 41686 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr6-7497 chr6 63391618 63391828 + 6.01 0.000 Intergenic Intergenic -71740 NM_016571 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr6-3331 chr6 1910716 1910926 + 6.01 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 265170 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr3-9883 chr3 82161438 82161648 + 6.01 0.000 intron (NR_147146, intron 1 of 8) intron (NR_147146, intron 1 of 8) 175401 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr10-3953 chr10 103387328 103387538 + 6.01 0.000 intron (NM_139052, intron 8 of 9) intron (NM_139052, intron 8 of 9) 6968 NR_031707 100302174 NR_031707 ENSG00000283867 MIR1307 MIRN1307|hsa-mir-1307|mir-1307 microRNA 1307 ncRNA chr15-2550 chr15 48877810 48878020 + 6.01 0.000 promoter-TSS (NM_014335) promoter-TSS (NM_014335) -219 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chr20-2946 chr20 16691002 16691212 + 6.01 0.000 Intergenic LTR16C|LTR|ERVL -38919 NM_003092 6629 Hs.280378 NM_003092 ENSG00000125870 SNRPB2 Msl1|U2B'' small nuclear ribonucleoprotein polypeptide B2 protein-coding chr12-5659 chr12 85278544 85278754 + 6.01 0.000 Intergenic Intergenic -1571 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr3-6995 chr3 169860484 169860694 + 6.01 0.000 exon (NM_001277127, exon 3 of 9) exon (NM_001277127, exon 3 of 9) 9346 NM_001277127 79782 Hs.411295 NM_024727 ENSG00000114248 LRRC31 HEL-S-293 leucine rich repeat containing 31 protein-coding chr18-2907 chr18 11839657 11839867 + 6.01 0.000 intron (NM_001369387, intron 5 of 11) L1MB7|LINE|L1 -11651 NM_020412 57132 Hs.656244 NM_020412 ENSG00000255112 CHMP1B C10orf2|C18-ORF2|C18orf2|CHMP1.5|Vps46-2|Vps46B|hVps46-2 charged multivesicular body protein 1B protein-coding chr5-8698 chr5 142201582 142201792 + 6.01 0.000 Intergenic L1MC4|LINE|L1 92908 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr14-3521 chr14 103654057 103654267 + 6.01 0.000 intron (NM_182923, intron 1 of 14) intron (NM_182923, intron 1 of 14) 24974 NM_001130107 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr15-5089 chr15 87939721 87939931 + 6.01 0.000 intron (NM_001320135, intron 13 of 15) intron (NM_001320135, intron 13 of 15) 6442 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr2-7406 chr2 8849348 8849558 + 6.01 0.000 Intergenic L2|LINE|L2 -11840 NM_001348731 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr14-2735 chr14 99029430 99029640 + 6.01 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 242662 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr19-6967 chr19 47991112 47991322 + 6.01 0.000 intron (NM_001128326, intron 1 of 5) intron (NM_001128326, intron 1 of 5) 953 NM_001128326 100131137 Hs.651072 NM_001128326 ENSG00000188334 BSPH1 BSP1|ELSPBP2 binder of sperm protein homolog 1 protein-coding chr2-7722 chr2 34580449 34580659 + 6.01 0.000 Intergenic L1MA3|LINE|L1 -97003 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr3-7407 chr3 101261522 101261732 + 6.01 0.000 intron (NM_016247, intron 9 of 18) intron (NM_016247, intron 9 of 18) 58948 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr6-5896 chr6 43949074 43949284 + 6.01 0.000 Intergenic Intergenic -51406 NR_160955 221416 Hs.531926 NM_153246 ENSG00000181577 C6orf223 - chromosome 6 open reading frame 223 ncRNA chr14-5277 chr14 100526648 100526858 + 6.01 0.000 intron (NM_001350950, intron 4 of 5) (ACC)n|Simple_repeat|Simple_repeat 41317 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr5-6957 chr5 141935588 141935798 + 6.01 0.000 intron (NM_014773, intron 10 of 11) intron (NM_014773, intron 10 of 11) 11822 NM_014773 9812 Hs.210532 NM_014773 ENSG00000081791 DELE1 DELE|KIAA0141 DAP3 binding cell death enhancer 1 protein-coding chrX-620 chrX 41465568 41465778 + 6.01 0.000 intron (NM_022567, intron 1 of 1) AluSx1|SINE|Alu 18213 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr3-10836 chr3 164766059 164766269 + 6.01 0.000 intron (NR_126405, intron 1 of 3) L1MA10|LINE|L1 65316 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr10-7671 chr10 28320722 28320932 + 6.01 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -17763 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr1-13430 chr1 2882356 2882566 + 6.01 0.000 Intergenic Intergenic -81593 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr14-3616 chr14 55438829 55439039 + 6.01 0.000 intron (NM_199047, intron 1 of 6) intron (NM_199047, intron 1 of 6) 1611 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr6-7306 chr6 44098924 44099134 + 6.01 0.000 Intergenic AluSz6|SINE|Alu -24377 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chrX-1580 chrX 72459623 72459833 + 6.01 0.000 intron (NR_051952, intron 8 of 9) L2b|LINE|L2 113115 NM_018486 55869 Hs.310536 NM_018486 ENSG00000147099 HDAC8 CDA07|CDLS5|HD8|HDACL1|KDAC8|MRXS6|RPD3|WTS histone deacetylase 8 protein-coding chr1-12704 chr1 53367975 53368185 + 6.01 0.000 Intergenic L2b|LINE|L2 39847 NR_131923 105378732 Hs.118609 NR_131923 ENSG00000225675 LINC01771 - long intergenic non-protein coding RNA 1771 ncRNA chr6-6255 chr6 34148474 34148684 + 6.01 0.000 intron (NM_001256809, intron 1 of 8) intron (NM_001256809, intron 1 of 8) -2442 NM_001256811 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr3-8021 chr3 190934863 190935073 + 6.01 0.000 Intergenic L1P3|LINE|L1 57038 NR_024343 100170222 Hs.717310 NR_024343 SNAR-I snaR-3 small NF90 (ILF3) associated RNA I snRNA chr12-4091 chr12 56050159 56050369 + 6.01 0.000 Intergenic AluSx3|SINE|Alu 8346 NM_001029 6231 Hs.447562 NM_001029 ENSG00000197728 RPS26 DBA10|S26|eS26 ribosomal protein S26 protein-coding chr15-3295 chr15 77896187 77896397 + 6.01 0.000 Intergenic Intergenic 30554 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr8-6212 chr8 37260902 37261112 + 6.01 0.000 Intergenic Intergenic 232906 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr3-3237 chr3 37611691 37611901 + 6.01 0.000 intron (NM_002207, intron 15 of 27) intron (NM_002207, intron 15 of 27) 159655 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr7-7294 chr7 39750301 39750511 + 6.01 0.000 intron (NR_026999, intron 1 of 11) L2a|LINE|L2 16838 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr18-2345 chr18 26806032 26806242 + 6.01 0.000 Intergenic Intergenic 56773 NM_004028 361 Hs.315369 NM_001650 ENSG00000171885 AQP4 MIWC|WCH4 aquaporin 4 protein-coding chr2-7395 chr2 8150080 8150290 + 6.01 0.000 intron (NR_034135, intron 7 of 8) intron (NR_034135, intron 7 of 8) -173371 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr21-1875 chr21 42863565 42863775 + 6.01 0.000 intron (NM_001260476, intron 3 of 10) intron (NM_001260476, intron 3 of 10) 15605 NM_001260477 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr17-6901 chr17 33748760 33748970 + 6.01 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -215105 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr8-6430 chr8 59369186 59369396 + 6.01 0.000 Intergenic Intergenic 250081 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr6-2101 chr6 158064208 158064418 + 6.01 0.000 intron (NM_003898, intron 9 of 26) intron (NM_003898, intron 9 of 26) 47220 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr12-6487 chr12 103745441 103745651 + 6.01 0.000 intron (NM_017564, intron 57 of 68) intron (NM_017564, intron 57 of 68) 95688 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr4-2939 chr4 98453220 98453430 + 6.01 0.000 Intergenic L1PB|LINE|L1 191941 NM_001100426 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding chr16-3566 chr16 63684122 63684332 + 6.01 0.000 Intergenic Intergenic 1437836 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr4-7739 chr4 92452263 92452473 + 6.01 0.000 intron (NM_001286838, intron 1 of 14) AluSx|SINE|Alu 147969 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr5-3757 chr5 55172689 55172899 + 6.01 0.000 promoter-TSS (NR_031572) promoter-TSS (NR_031572) 383 NM_001170402 166979 Hs.669184 NM_152623 ENSG00000164287 CDC20B G6VTS76519 cell division cycle 20B protein-coding chr22-3837 chr22 31997117 31997327 + 6.01 0.000 intron (NR_149128, intron 4 of 4) AluSx1|SINE|Alu 26399 NR_149128 105372999 Hs.512525 NR_149128 LINC02558 - long intergenic non-protein coding RNA 2558 ncRNA chr17-7318 chr17 5032949 5033159 + 6.01 0.000 exon (NM_017986, exon 5 of 5) exon (NM_017986, exon 5 of 5) 2372 NM_017986 55065 Hs.632247 NM_017986 ENSG00000132517 SLC52A1 GPCR42|GPR172B|PAR2|RBFVD|RFT1|RFVT1|hRFT1 solute carrier family 52 member 1 protein-coding chr1-3682 chr1 161207876 161208086 + 6.01 0.000 intron (NM_001166159, intron 3 of 12) AluSq2|SINE|Alu 5834 NM_001166159 4720 Hs.173611 NM_004550 ENSG00000158864 NDUFS2 CI-49|MC1DN6 NADH:ubiquinone oxidoreductase core subunit S2 protein-coding chr6-6852 chr6 8710309 8710519 + 6.01 0.000 intron (NR_038980, intron 3 of 4) MIR3|SINE|MIR 58205 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr9-8434 chr9 121755354 121755564 + 6.01 0.000 intron (NM_138709, intron 1 of 13) intron (NM_138709, intron 1 of 13) 12674 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr1-6593 chr1 36851374 36851584 + 6.01 0.000 intron (NM_000831, intron 8 of 15) intron (NM_000831, intron 8 of 15) 183036 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr5-7525 chr5 37266950 37267160 + 6.01 0.000 Intergenic HERVL-int|LTR|ERVL -17627 NM_023073 65250 Hs.586199 NM_023073 ENSG00000197603 CPLANE1 C5orf42|Hug|JBTS17|OFD6 ciliogenesis and planar polarity effector 1 protein-coding chr7-7539 chr7 111640154 111640364 + 6.01 0.000 Intergenic Intergenic -77742 NM_001244606 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr5-3781 chr5 71679091 71679301 + 6.01 0.000 Intergenic AluSz6|SINE|Alu -40079 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr17-7544 chr17 18816863 18817073 + 6.01 0.000 Intergenic Intergenic 27933 NM_001316920 51030 Hs.87295 NM_016078 ENSG00000171928 TVP23B CGI-148|FAM18B|FAM18B1|NPD008|YDR084C trans-golgi network vesicle protein 23 homolog B protein-coding chr7-4936 chr7 134941270 134941480 + 6.01 0.000 intron (NM_033139, intron 5 of 12) intron (NM_033139, intron 5 of 12) -45133 NM_001345853 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr2-13948 chr2 185771793 185772003 + 6.01 0.000 intron (NM_173651, intron 13 of 22) MSTB-int|LTR|ERVL-MaLR 28252 NR_144453 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA chr4-4386 chr4 41152773 41152983 + 6.01 0.000 intron (NM_173075, intron 1 of 16) intron (NM_173075, intron 1 of 16) 61664 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr18-3005 chr18 24877426 24877636 + 6.01 0.000 Intergenic Intergenic 110448 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr5-1973 chr5 135033938 135034148 + 6.01 0.000 5' UTR (NM_002653, exon 1 of 3) 5' UTR (NM_002653, exon 1 of 3) 185 NM_002653 5307 Hs.84136 NM_002653 ENSG00000069011 PITX1 BFT|CCF|LBNBG|POTX|PTX1 paired like homeodomain 1 protein-coding chr7-7055 chr7 147829825 147830035 + 6.01 0.000 intron (NM_014141, intron 12 of 22) intron (NM_014141, intron 12 of 22) 158251 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr16-3745 chr16 14321921 14322131 + 6.01 0.000 intron (NR_132983, intron 1 of 1) intron (NR_132983, intron 1 of 1) 12741 NR_029854 100126355 NR_029854 ENSG00000199130 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a|mir-365a microRNA 365a ncRNA chr12-8204 chr12 123249317 123249527 + 6.01 0.000 intron (NM_001194995, intron 1 of 2) LTR12C|LTR|ERV1 15678 NM_001143905 91574 Hs.319128 NM_152269 ENSG00000130921 C12orf65 COXPD7|SPG55 chromosome 12 open reading frame 65 protein-coding chrX-1805 chrX 88157567 88157777 + 6.01 0.000 Intergenic HERVL-int|LTR|ERVL -589553 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr8-5733 chr8 135907075 135907285 + 6.01 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 449724 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr12-5511 chr12 130048245 130048455 + 6.01 0.000 Intergenic Intergenic -6008 NR_024457 100190940 Hs.625993 NR_024457 ENSG00000214039 LINC02418 - long intergenic non-protein coding RNA 2418 ncRNA chr6-3229 chr6 142725524 142725734 + 6.01 0.000 Intergenic Intergenic -87740 NR_027312 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr10-4906 chr10 21663012 21663222 + 6.01 0.000 intron (NM_001195626, intron 9 of 22) L1MCa|LINE|L1 128945 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr20-2764 chr20 51468680 51468890 + 6.01 0.000 intron (NM_012340, intron 5 of 10) L2c|LINE|L2 -15808 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr16-4282 chr16 26447552 26447762 + 6.01 0.000 Intergenic LTR29|LTR|ERV1 422420 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr14-3743 chr14 37700803 37701013 + 6.01 0.000 intron (NM_001310135, intron 6 of 32) intron (NM_001310135, intron 6 of 32) -71475 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr22-2868 chr22 45201683 45201893 + 6.01 0.000 promoter-TSS (NR_031651) promoter-TSS (NR_031651) -769 NR_031651 100302149 NR_031651 ENSG00000221598 MIR1249 MIRN1249|hsa-mir-1249 microRNA 1249 ncRNA chrX-4011 chrX 16624936 16625146 + 6.01 0.000 intron (NM_019857, intron 14 of 18) intron (NM_019857, intron 14 of 18) 2044 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr8-5189 chr8 103021739 103021949 + 6.01 0.000 intron (NM_001695, intron 1 of 12) intron (NM_001695, intron 1 of 12) 761 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr4-6474 chr4 148328617 148328827 + 6.01 0.000 intron (NM_000901, intron 2 of 8) intron (NM_000901, intron 2 of 8) 113692 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr5-8180 chr5 104982013 104982223 + 6.01 0.000 Intergenic L1MA1|LINE|L1 -117356 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr19-6365 chr19 11874411 11874621 + 6.01 0.000 Intergenic Intergenic 8487 NM_152262 90594 Hs.528731 NM_152262 ENSG00000171291 ZNF439 - zinc finger protein 439 protein-coding chr3-9863 chr3 80300248 80300458 + 6.01 0.000 Intergenic Intergenic -464544 NR_147144 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr7-8145 chr7 28726450 28726660 + 6.01 0.000 intron (NM_001011666, intron 3 of 6) intron (NM_001011666, intron 3 of 6) 40422 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr10-2510 chr10 44044137 44044347 + 6.01 0.000 Intergenic Intergenic 131840 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr2-9807 chr2 132830263 132830473 + 6.01 0.000 intron (NM_207481, intron 11 of 17) intron (NM_207481, intron 11 of 17) -85189 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr3-7324 chr3 38477988 38478198 + 6.01 0.000 intron (NM_001106, intron 3 of 10) intron (NM_001106, intron 3 of 10) -18179 NR_153330 9941 Hs.517897 NM_005107 ENSG00000157036 EXOG ENDOGL1|ENDOGL2|ENGL|ENGL-a|ENGL-b|ENGLA|ENGLB exo/endonuclease G protein-coding chr3-8815 chr3 7663519 7663729 + 6.01 0.000 intron (NM_000844, intron 8 of 9) intron (NM_000844, intron 8 of 9) -128340 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr4-7735 chr4 91626486 91626696 + 6.01 0.000 Intergenic HERVH-int|LTR|ERV1 650711 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr1-11783 chr1 23119483 23119693 + 6.01 0.000 intron (NM_033631, intron 1 of 4) L2c|LINE|L2 49268 NM_033631 7798 Hs.257900 NM_033631 ENSG00000169641 LUZP1 LUZP leucine zipper protein 1 protein-coding chr7-6601 chr7 98212130 98212340 + 6.01 0.000 promoter-TSS (NM_177455) promoter-TSS (NM_177455) -19 NM_177455 168620 Hs.511979 NM_177455 ENSG00000180535 BHLHA15 BHLHB8|MIST1 basic helix-loop-helix family member a15 protein-coding chr17-7328 chr17 5632134 5632344 + 6.01 0.000 Intergenic Intergenic -47730 NM_033004 22861 Hs.652273 NM_014922 ENSG00000091592 NLRP1 AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family pyrin domain containing 1 protein-coding chrX-2306 chrX 54296675 54296885 + 6.01 0.000 intron (NM_001002838, intron 7 of 22) intron (NM_001002838, intron 7 of 22) 61225 NM_020922 65267 Hs.92423 NM_020922 ENSG00000196632 WNK3 PRKWNK3 WNK lysine deficient protein kinase 3 protein-coding chr21-1509 chr21 43263174 43263384 + 6.01 0.000 Intergenic MIRc|SINE|MIR 68760 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chrX-2706 chrX 120329982 120330192 + 6.01 0.000 Intergenic LTR53|LTR|ERVL -18551 NM_017938 55026 Hs.437563 NM_017938 ENSG00000125355 TMEM255A FAM70A transmembrane protein 255A protein-coding chr10-3922 chr10 80388518 80388728 + 6.01 0.000 Intergenic Intergenic -19206 NM_001243779 84293 Hs.500333 NM_032333 ENSG00000122378 PRXL2A Adrx|C10orf58|FAM213A|PAMM peroxiredoxin like 2A protein-coding chr17-3400 chr17 2724220 2724430 + 6.01 0.000 3' UTR (NM_001355573, exon 4 of 4) 3' UTR (NM_001355573, exon 4 of 4) 12016 NR_136412 105371592 Hs.731739 NR_136412 ENSG00000262050 LOC105371592 - uncharacterized LOC105371592 ncRNA chr8-7412 chr8 140039639 140039849 + 6.01 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 60791 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr8-6782 chr8 94428292 94428502 + 6.01 0.000 3' UTR (NM_001256141, exon 2 of 2) 3' UTR (NM_001256141, exon 2 of 2) 8547 NM_001256141 100861412 Hs.30561 NM_001256141 ENSG00000265817 FSBP - fibrinogen silencer binding protein protein-coding chr2-9628 chr2 10193709 10193919 + 6.01 0.000 intron (NR_161344, intron 3 of 3) intron (NR_161344, intron 3 of 3) -1143 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr3-5492 chr3 193311247 193311457 + 6.01 0.000 intron (NM_198505, intron 20 of 29) intron (NM_198505, intron 20 of 29) 4108 NR_046758 100874218 Hs.407490 NR_046758 ATP13A5-AS1 - ATP13A5 antisense RNA 1 ncRNA chr13-3276 chr13 42338045 42338255 + 6.01 0.000 Intergenic Intergenic 65998 NM_016248 11215 Hs.105105 NM_016248 ENSG00000023516 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A-kinase anchoring protein 11 protein-coding chr5-8309 chr5 116130106 116130316 + 6.01 0.000 intron (NM_001308080, intron 4 of 6) L2a|LINE|L2 44749 NM_001308080 51397 Hs.483136 NM_016144 ENSG00000145781 COMMD10 PTD002 COMM domain containing 10 protein-coding chr14-2905 chr14 38213098 38213308 + 6.01 0.000 TTS (NM_001049) TTS (NM_001049) 5299 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr2-12721 chr2 80504677 80504887 + 6.01 0.000 intron (NM_001282599, intron 3 of 11) MIRb|SINE|MIR 191403 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr1-5508 chr1 172897657 172897867 + 6.01 0.000 Intergenic AluSc5|SINE|Alu 153201 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr2-14242 chr2 211707705 211707915 + 6.01 0.000 intron (NM_001042599, intron 9 of 26) intron (NM_001042599, intron 9 of 26) 718550 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr3-4190 chr3 128993968 128994178 + 6.01 0.000 promoter-TSS (NM_020741) promoter-TSS (NM_020741) 3 NM_020741 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr16-3449 chr16 90053735 90053945 + 6.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR -6057 NR_027336 100130015 Hs.431792 NR_027335 ENSG00000222019 URAHP URAH urate (hydroxyiso-) hydrolase, pseudogene pseudo chr14-2676 chr14 74634574 74634784 + 6.01 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -22442 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr7-4913 chr7 130018876 130019086 + 6.01 0.000 intron (NM_016478, intron 9 of 9) MamSINE1|SINE|tRNA-RTE 32404 NM_001363701 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 HSPC216|NIPA zinc finger C3HC-type containing 1 protein-coding chr22-3634 chr22 21749268 21749478 + 6.01 0.000 Intergenic AluJb|SINE|Alu -13579 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr4-6578 chr4 107878 108088 + 6.01 0.000 Intergenic CpG -16493 NR_110529 255403 Hs.636638 NM_001039127 ENSG00000250312 ZNF718 - zinc finger protein 718 protein-coding chr5-7896 chr5 75298267 75298477 + 6.01 0.000 Intergenic MER4-int|LTR|ERV1 -38796 NM_001364187 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding chr3-5459 chr3 183405361 183405571 + 6.01 0.000 intron (NM_015078, intron 1 of 29) L1ME1|LINE|L1 22803 NM_015078 23101 Hs.208267 NM_015078 ENSG00000053524 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding chr2-5704 chr2 211599392 211599602 + 6.01 0.000 intron (NM_001042599, intron 19 of 26) L4_B_Mam|LINE|RTE-X 826863 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr14-3935 chr14 104403414 104403624 + 6.01 0.000 Intergenic Intergenic -176245 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr3-2336 chr3 136960971 136961181 + 6.01 0.000 intron (NM_144717, intron 1 of 6) intron (NM_144717, intron 1 of 6) 3093 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr5-7829 chr5 68014902 68015112 + 6.01 0.000 Intergenic Intergenic -174869 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr5-7704 chr5 57113873 57114083 + 6.01 0.000 Intergenic Intergenic -59970 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr18-3305 chr18 54558237 54558447 + 6.01 0.000 Intergenic Intergenic -29417 NM_001307955 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr11-10077 chr11 85187755 85187965 + 6.01 0.000 intron (NM_001142699, intron 4 of 27) L1M4a1|LINE|L1 -264439 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr16-6238 chr16 29413633 29413843 + 6.01 0.000 Intergenic AluY|SINE|Alu -9193 NM_001310137 728888 Hs.720286 NM_001310137 ENSG00000254206 NPIPB11 NPIP nuclear pore complex interacting protein family member B11 protein-coding chr8-4336 chr8 100103804 100104014 + 6.01 0.000 intron (NM_015668, intron 2 of 27) intron (NM_015668, intron 2 of 27) 1717 NM_001286693 26166 Hs.120021 NM_015668 ENSG00000132554 RGS22 CT145|PRTD-NY2 regulator of G protein signaling 22 protein-coding chr2-10089 chr2 51013298 51013508 + 6.01 0.000 intron (NM_004801, intron 2 of 21) intron (NM_004801, intron 2 of 21) 18729 NM_001330078 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr7-9158 chr7 112585770 112585980 + 6.01 0.000 Intergenic LTR67B|LTR|ERVL -32190 NR_110160 100996249 Hs.561749 NR_110159 LOC100996249 - uncharacterized LOC100996249 ncRNA chr13-3998 chr13 68527807 68528017 + 6.01 0.000 Intergenic L1PA7|LINE|L1 357413 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr17-8140 chr17 58936311 58936521 + 6.01 0.000 intron (NM_014906, intron 1 of 6) intron (NM_014906, intron 1 of 6) 170464 NM_001320987 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding chr20-1449 chr20 57476757 57476967 + 6.01 0.000 Intergenic Intergenic 48005 NR_072975 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr2-7506 chr2 20123019 20123229 + 6.01 0.000 Intergenic Intergenic -71496 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr12-7569 chr12 74767435 74767645 + 6.01 0.000 Intergenic L1MA9|LINE|L1 229705 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr4-5804 chr4 83104501 83104711 + 6.01 0.000 intron (NM_001130716, intron 3 of 4) MIRb|SINE|MIR 5283 NM_001130716 51316 Hs.546392 NM_016619 ENSG00000145287 PLAC8 C15|DGIC|PNAS-144|onzin placenta associated 8 protein-coding chr12-6608 chr12 127528106 127528316 + 6.01 0.000 Intergenic Intergenic 108256 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LINC02411 - long intergenic non-protein coding RNA 2411 ncRNA chr15-4231 chr15 27436693 27436903 + 6.01 0.000 intron (NM_001270873, intron 5 of 5) L2|LINE|L2 -275479 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr4-5648 chr4 8419762 8419972 + 6.01 0.000 intron (NM_003501, intron 1 of 17) intron (NM_003501, intron 1 of 17) 20856 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr3-10945 chr3 175952450 175952660 + 6.01 0.000 Intergenic Intergenic -176222 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr15-2870 chr15 41878633 41878843 + 6.01 0.000 intron (NM_016642, intron 16 of 67) intron (NM_016642, intron 16 of 67) -12187 NR_036195 100423013 NR_036195 ENSG00000264850 MIR4310 - microRNA 4310 ncRNA chr1-12186 chr1 200039493 200039703 + 6.01 0.000 intron (NM_003822, intron 1 of 6) CpG -3227 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr2-10138 chr2 72762058 72762268 + 6.01 0.000 intron (NR_135774, intron 1 of 19) AluSc|SINE|Alu 63870 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chrX-3379 chrX 151948163 151948373 + 6.01 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 10390 NR_029638 407009 NR_029638 ENSG00000284363 MIR224 MIRN224|miRNA224 microRNA 224 ncRNA chr22-3103 chr22 49632330 49632540 + 6.01 0.000 intron (NM_001289922, intron 1 of 5) CpG 25084 NR_110522 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr16-2993 chr16 26751377 26751587 + 6.01 0.000 Intergenic L2c|LINE|L2 -315445 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr15-2172 chr15 79508604 79508814 + 6.01 0.000 Intergenic HAL1|LINE|L1 76193 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr11-4826 chr11 11798976 11799186 + 6.01 0.000 Intergenic Intergenic -15859 NR_107037 102465870 NR_107037 ENSG00000278529 MIR8070 hsa-mir-8070 microRNA 8070 ncRNA chr6-2885 chr6 9086402 9086612 + 6.01 0.000 Intergenic Intergenic 434298 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr3-3532 chr3 40504714 40504924 + 6.01 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -1220 NM_001256167 253639 Hs.581541 NM_175888 ENSG00000177842 ZNF620 - zinc finger protein 620 protein-coding chr8-5236 chr8 125746598 125746808 + 6.01 0.000 Intergenic L2a|LINE|L2 204494 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr8-6631 chr8 77520848 77521058 + 6.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR 70256 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr22-2879 chr22 45763628 45763838 + 6.01 0.000 intron (NM_013236, intron 9 of 11) intron (NM_013236, intron 9 of 11) 3209 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chrX-4446 chrX 55529313 55529523 + 6.01 0.000 Intergenic L2|LINE|L2 -40220 NM_201286 158880 Hs.40061 NM_201286 ENSG00000247746 USP51 - ubiquitin specific peptidase 51 protein-coding chr2-10790 chr2 44900378 44900588 + 6.01 0.000 Intergenic Intergenic 38405 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr15-3352 chr15 82968162 82968372 + 6.01 0.000 Intergenic L1MB5|LINE|L1 -15547 NM_004839 9455 Hs.578443 NM_004839 ENSG00000103942 HOMER2 ACPD|CPD|DFNA68|HOMER-2|VESL-2 homer scaffold protein 2 protein-coding chr15-3187 chr15 70347912 70348122 + 6.01 0.000 Intergenic LTR16E1|LTR|ERVL 157911 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr5-6059 chr5 278892 279102 + 6.01 0.000 intron (NM_001267557, intron 2 of 3) intron (NM_001267557, intron 2 of 3) 7351 NM_001267559 10016 Hs.50823 NM_013232 ENSG00000249915 PDCD6 ALG-2|ALG2|PEF1B programmed cell death 6 protein-coding chr7-8517 chr7 54514831 54515041 + 6.01 0.000 Intergenic L1PB1|LINE|L1 -27389 NM_001301009 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding chr19-6457 chr19 16874477 16874687 + 6.01 0.000 intron (NM_001297595, intron 14 of 18) (CTGGT)n|Simple_repeat|Simple_repeat 11308 NM_001297597 23309 Hs.13999 NM_015260 ENSG00000127511 SIN3B - SIN3 transcription regulator family member B protein-coding chr22-1811 chr22 34157991 34158201 + 6.01 0.000 Intergenic AluY|SINE|Alu -235208 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr14-2427 chr14 67953282 67953492 + 6.01 0.000 intron (NM_133509, intron 7 of 10) L2b|LINE|L2 129795 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr1-14190 chr1 33780930 33781140 + 6.01 0.000 intron (NM_052896, intron 12 of 69) intron (NM_052896, intron 12 of 69) -79440 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding chr9-7918 chr9 89406434 89406644 + 6.01 0.000 intron (NM_001371194, intron 2 of 15) intron (NM_001371194, intron 2 of 15) 73351 NR_163888 chr5-7320 chr5 15998371 15998581 + 6.01 0.000 Intergenic Intergenic 63294 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chrX-3739 chrX 122756344 122756554 + 6.01 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -427794 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr6-3498 chr6 19016236 19016446 + 6.01 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 164139 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr5-7109 chr5 53300 53510 + 6.01 0.000 Intergenic CpG -38763 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr7-4963 chr7 147569150 147569360 + 6.01 0.000 intron (NM_014141, intron 11 of 22) intron (NM_014141, intron 11 of 22) -102424 NR_133929 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr7-4690 chr7 43177760 43177970 + 6.01 0.000 intron (NM_015052, intron 2 of 29) intron (NM_015052, intron 2 of 29) 26970 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr5-4902 chr5 68428805 68429015 + 6.01 0.000 Intergenic Intergenic 136333 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chrX-3540 chrX 55109366 55109576 + 6.01 0.000 Intergenic MER41-int|LTR|ERV1 20453 NM_207339 203569 Hs.662489 NM_207339 ENSG00000234068 PAGE2 CT16.4|GAGEC2|GAGEE2|PAGE-2 PAGE family member 2 protein-coding chr11-9871 chr11 73802023 73802233 + 6.01 0.000 non-coding (NR_134659, exon 3 of 10) non-coding (NR_134659, exon 3 of 10) 14254 NM_001318498 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr4-6896 chr4 14121732 14121942 + 6.01 0.000 intron (NR_033931, intron 1 of 2) intron (NR_033931, intron 1 of 2) 9869 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr14-5018 chr14 78205782 78205992 + 6.01 0.000 intron (NR_073547, intron 1 of 20) L2b|LINE|L2 35514 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chrX-3975 chrX 13536279 13536489 + 6.01 0.000 Intergenic MER3|DNA|hAT-Charlie -33217 NM_015507 25975 Hs.12844 NM_015507 ENSG00000198759 EGFL6 MAEG|W80 EGF like domain multiple 6 protein-coding chr19-7056 chr19 52661990 52662200 + 6.01 0.000 intron (NM_001348018, intron 1 of 5) intron (NM_001348018, intron 1 of 5) -23704 NM_001105549 55769 Hs.467210 NM_018300 ENSG00000167766 ZNF83 HPF1|ZNF816B zinc finger protein 83 protein-coding chr10-8828 chr10 109775423 109775633 + 6.01 0.000 Intergenic Intergenic 147718 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr19-2737 chr19 37964230 37964440 + 6.01 0.000 intron (NM_015073, intron 1 of 21) AluJb|SINE|Alu 57127 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr8-4813 chr8 15534627 15534837 + 6.01 0.000 Intergenic MER57A1|LTR|ERV1 -5355 NM_178234 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr17-4912 chr17 75002934 75003144 + 6.01 0.000 intron (NM_014603, intron 4 of 4) LTR33|LTR|ERVL -9631 NM_001545 3396 Hs.407955 NM_001545 ENSG00000167862 MRPL58 DS-1|DS1|ICT1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding chr3-10442 chr3 132574192 132574402 + 6.01 0.000 intron (NR_132427, intron 15 of 17) intron (NR_132427, intron 15 of 17) -22973 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr6-6620 chr6 150254667 150254877 + 6.01 0.000 Intergenic Intergenic 111728 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr10-7940 chr10 52740244 52740454 + 6.01 0.000 intron (NR_155748, intron 1 of 2) intron (NR_155748, intron 1 of 2) 15055 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA chr6-5969 chr6 85056893 85057103 + 6.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -292400 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box transcription factor 18 protein-coding chr1-16565 chr1 234521502 234521712 + 6.01 0.000 Intergenic Intergenic 10172 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr1-9721 chr1 53274676 53274886 + 6.01 0.000 intron (NM_033300, intron 4 of 16) intron (NM_033300, intron 4 of 16) 36171 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 - uncharacterized LOC100507564 ncRNA chr7-6135 chr7 123460858 123461068 + 6.01 0.000 intron (NR_104245, intron 10 of 11) intron (NR_104245, intron 10 of 11) 71985 NM_001282855 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr3-10167 chr3 116956036 116956246 + 6.01 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 34710 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr2-10647 chr2 17093791 17094001 + 6.01 0.000 Intergenic Intergenic 424544 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr2-10496 chr2 223884686 223884896 + 6.01 0.000 intron (NM_020830, intron 8 of 11) intron (NM_020830, intron 8 of 11) -47209 NR_110906 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr14-2821 chr14 23234721 23234931 + 6.01 0.000 intron (NM_001370218, intron 2 of 15) AluJr|SINE|Alu -3110 NM_001282322 100507650 NM_001282322 ENSG00000215277 RNF212B C14orf164 ring finger protein 212B protein-coding chr14-4566 chr14 46878954 46879164 + 6.01 0.000 intron (NM_001113498, intron 11 of 16) intron (NM_001113498, intron 11 of 16) -227278 NM_080746 140801 Hs.308332 NM_080746 ENSG00000165496 RPL10L RPL10_5_1358 ribosomal protein L10 like protein-coding chr13-2164 chr13 111911795 111912005 + 6.01 0.000 Intergenic Intergenic 18404 NR_120401 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr9-8722 chr9 131849524 131849734 + 6.01 0.000 Intergenic Intergenic -109685 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr5-3925 chr5 174222786 174222996 + 6.01 0.000 Intergenic MSTC|LTR|ERVL-MaLR -113463 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr2-11706 chr2 9748936 9749146 + 6.01 0.000 Intergenic MIRb|SINE|MIR -94401 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr22-3508 chr22 48951346 48951556 + 6.01 0.000 Intergenic AluJo|SINE|Alu 84681 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr9-3604 chr9 84583961 84584171 + 6.01 0.000 Intergenic Intergenic -84392 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr3-7132 chr3 184710909 184711119 + 6.01 0.000 exon (NM_022149, exon 1 of 1) exon (NM_022149, exon 1 of 1) 1050 NM_022149 64110 Hs.306123 NM_022149 ENSG00000177383 MAGEF1 MAGE-F1 MAGE family member F1 protein-coding chr12-2711 chr12 121918630 121918840 + 6.01 0.000 TTS (NM_001261400) TTS (NM_001261400) 143 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr12-6828 chr12 13531523 13531733 + 6.01 0.000 Intergenic Intergenic -154883 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr2-11181 chr2 151887110 151887320 + 6.01 0.000 intron (NM_000726, intron 2 of 13) intron (NM_000726, intron 2 of 13) -58794 NM_177985 26225 Hs.470233 NM_012097 ENSG00000162980 ARL5A ARFLP5|ARL5 ADP ribosylation factor like GTPase 5A protein-coding chrX-4575 chrX 70834207 70834417 + 6.01 0.000 intron (NM_001003811, intron 8 of 30) MIR3|SINE|MIR 11983 NR_145758 109617015 NR_145758 ENSG00000280704 SNORD3E - small nucleolar RNA, C/D box 3E snoRNA chr12-5397 chr12 121076644 121076854 + 6.01 0.000 Intergenic SVA_D|Retroposon|SVA -37507 NM_001261825 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr5-7690 chr5 55913389 55913599 + 6.01 0.000 exon (NM_001242638, exon 15 of 18) exon (NM_001242638, exon 15 of 18) 60172 NM_001242639 133396 Hs.55378 NM_139017 ENSG00000164509 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding chrX-5338 chrX 147612377 147612587 + 6.01 0.000 Intergenic Intergenic 299335 NR_024499 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr9-8470 chr9 123646577 123646787 + 6.01 0.000 intron (NM_001352968, intron 8 of 18) L2a|LINE|L2 -161060 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chrX-3691 chrX 109031040 109031250 + 6.01 0.000 Intergenic L1M1|LINE|L1 294605 NR_110652 101928358 Hs.722300 NR_110652 ENSG00000237863 LOC101928358 - uncharacterized LOC101928358 ncRNA chr5-6230 chr5 80707619 80707829 + 6.01 0.000 intron (NM_002439, intron 8 of 23) AluJo|SINE|Alu -52741 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr10-8118 chr10 69663090 69663300 + 6.01 0.000 Intergenic Intergenic 32948 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr2-8569 chr2 136279694 136279904 + 6.01 0.000 Intergenic Intergenic -161644 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr10-6672 chr10 107468977 107469187 + 6.01 0.000 Intergenic Intergenic -304376 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr12-7437 chr12 61481329 61481539 + 6.01 0.000 Intergenic L1PA13|LINE|L1 711405 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr11-10126 chr11 88569472 88569682 + 6.01 0.000 intron (NM_001143831, intron 6 of 8) MLT1J|LTR|ERVL-MaLR 65001 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr19-6788 chr19 41195562 41195772 + 6.01 0.000 intron (NM_030622, intron 2 of 8) L2b|LINE|L2 2448 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr11-9267 chr11 44340831 44341041 + 6.01 0.000 Intergenic Intergenic -30797 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr15-3212 chr15 73268802 73269012 + 6.01 0.000 intron (NM_002499, intron 16 of 28) intron (NM_002499, intron 16 of 28) -31003 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr18-2383 chr18 76255582 76255792 + 6.01 0.000 Intergenic Intergenic 46177 NR_146507 105372207 Hs.303880 NR_146507 LINC01893 - long intergenic non-protein coding RNA 1893 ncRNA chr2-9898 chr2 223277131 223277341 + 6.01 0.000 Intergenic Intergenic 225306 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr4-5818 chr4 97607976 97608186 + 6.01 0.000 intron (NM_174952, intron 10 of 10) LTR78|LTR|ERV1 241155 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chrX-2178 chrX 38967391 38967601 + 6.01 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -163613 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr11-6050 chr11 30349530 30349740 + 6.01 0.000 Intergenic Intergenic 26531 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr15-4266 chr15 35183393 35183603 + 6.01 0.000 Intergenic Intergenic -53828 NR_003144 723972 Hs.631698 NR_003144 ENSG00000259516 ANP32AP1 - acidic nuclear phosphoprotein 32 family member A pseudogene 1 pseudo chr11-10418 chr11 115489635 115489845 + 6.01 0.000 intron (NM_001098517, intron 1 of 8) L2b|LINE|L2 14675 NM_001301045 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr22-3323 chr22 20172493 20172703 + 6.01 0.000 Intergenic Intergenic -21543 NM_001365892 388849 Hs.454905 NM_001243537 ENSG00000234409 CCDC188 - coiled-coil domain containing 188 protein-coding chr2-10176 chr2 90051408 90051618 + 6.01 0.000 Intergenic AluYj4|SINE|Alu -413606 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr14-5077 chr14 84825499 84825709 + 6.01 0.000 Intergenic Intergenic -446328 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr6-6007 chr6 106576054 106576264 + 6.01 0.000 intron (NM_032730, intron 8 of 8) intron (NM_032730, intron 8 of 8) 53339 NM_032730 84816 Hs.155839 NM_032730 ENSG00000130347 RTN4IP1 NIMP|OPA10 reticulon 4 interacting protein 1 protein-coding chr2-13741 chr2 168713417 168713627 + 6.01 0.000 intron (NM_001256126, intron 6 of 10) intron (NM_001256126, intron 6 of 10) 72907 NR_045786 100861402 Hs.506829 NR_045786 ENSG00000227617 CERS6-AS1 - CERS6 antisense RNA 1 ncRNA chr4-6147 chr4 31497323 31497533 + 6.01 0.000 Intergenic L2a|LINE|L2 -9116 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr22-2945 chr22 48106343 48106553 + 6.01 0.000 Intergenic Intergenic -167916 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr2-5597 chr2 177031732 177031942 + 6.01 0.000 Intergenic Intergenic 180574 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr20-1014 chr20 5939730 5939940 + 6.01 0.000 intron (NM_001281467, intron 9 of 9) intron (NM_001281467, intron 9 of 9) 10698 NM_015939 51605 Hs.128791 NM_015939 ENSG00000089195 TRMT6 CGI-09|GCD10|Gcd10p tRNA methyltransferase 6 protein-coding chr1-14809 chr1 72214454 72214664 + 6.01 0.000 intron (NM_173808, intron 1 of 6) L1PA8|LINE|L1 67980 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr19-5768 chr19 27746874 27747084 + 6.01 0.000 Intergenic HERVK22-int|LTR|ERVK -46452 NR_146735 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA chr5-6267 chr5 99622322 99622532 + 6.01 0.000 Intergenic L1M2b|LINE|L1 88437 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chrX-3053 chrX 104167305 104167515 + 6.01 0.000 intron (NM_207318, intron 1 of 5) intron (NM_207318, intron 1 of 5) 957 NM_207318 139231 Hs.496535 NM_207318 ENSG00000123575 FAM199X CXorf39 family with sequence similarity 199, X-linked protein-coding chrX-2624 chrX 109120247 109120457 + 6.01 0.000 Intergenic Intergenic 361734 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr4-3838 chr4 123564841 123565051 + 6.01 0.000 Intergenic Intergenic -85045 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr7-8596 chr7 66889372 66889582 + 6.01 0.000 Intergenic Intergenic -14643 NR_136637 644794 Hs.552124 NR_136637 LINC02604 lncHERG long intergenic non-protein coding RNA 2604 ncRNA chr10-3440 chr10 44857611 44857821 + 6.01 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -53600 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr20-2312 chr20 6890900 6891110 + 6.01 0.000 Intergenic AluSx|SINE|Alu 123319 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr13-3613 chr13 29754590 29754800 + 6.01 0.000 Intergenic MER66B|LTR|ERV1 95922 NM_007106 5412 Hs.145575 NM_007106 ENSG00000122042 UBL3 HCG-1|PNSC1 ubiquitin like 3 protein-coding chr2-10246 chr2 114374040 114374250 + 6.01 0.000 Intergenic MLT2B3|LTR|ERVL -68496 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr5-6184 chr5 60016279 60016489 + 6.01 0.000 intron (NM_001349243, intron 2 of 16) Tigger1|DNA|TcMar-Tigger -122658 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr13-4339 chr13 102329032 102329242 + 6.01 0.000 intron (NM_001321941, intron 1 of 5) L2a|LINE|L2 -11433 NM_001321936 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr1-8342 chr1 54799569 54799779 + 6.01 0.000 intron (NM_001114108, intron 1 of 6) intron (NM_001114108, intron 1 of 6) 1649 NM_001114108 55001 Hs.16230 NM_017904 ENSG00000006555 TTC22 - tetratricopeptide repeat domain 22 protein-coding chr9-8161 chr9 104780970 104781180 + 6.01 0.000 TTS (NM_005502) TTS (NM_005502) 16946 NR_130760 55335 Hs.429294 NM_018376 ENSG00000165028 NIPSNAP3B FP944|NIPSNAP3|SNAP1 nipsnap homolog 3B protein-coding chr13-3097 chr13 51959572 51959782 + 6.01 0.000 intron (NM_001330579, intron 5 of 18) intron (NM_001330579, intron 5 of 18) 51773 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chr12-6621 chr12 132065440 132065650 + 6.01 0.000 intron (NM_015409, intron 48 of 52) MIR|SINE|MIR -18738 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400P1 EP400NL EP400 pseudogene 1 pseudo chr8-1802 chr8 103733854 103734064 + 6.01 0.000 intron (NM_001348496, intron 3 of 23) L1M1|LINE|L1 -85261 NM_001348501 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr8-4889 chr8 72067565 72067775 + 6.01 0.000 intron (NM_007332, intron 3 of 26) intron (NM_007332, intron 3 of 26) 7914 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr15-4719 chr15 67444247 67444457 + 6.01 0.000 intron (NR_040052, intron 3 of 5) intron (NR_040052, intron 3 of 5) 76621 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr13-2402 chr13 42720552 42720762 + 6.01 0.000 Intergenic Intergenic -60893 NM_182508 144809 Hs.16970 NM_182508 ENSG00000179813 FAM216B C13orf30 family with sequence similarity 216 member B protein-coding chrX-3239 chrX 68904305 68904515 + 6.01 0.000 Intergenic Intergenic 75413 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr7-8156 chr7 29150981 29151191 + 6.01 0.000 intron (NM_001293069, intron 2 of 13) intron (NM_001293069, intron 2 of 13) 4539 NM_001293069 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr8-5558 chr8 75031649 75031859 + 6.01 0.000 intron (NM_031461, intron 14 of 14) intron (NM_031461, intron 14 of 14) 31599 NM_001286778 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr18-2859 chr18 8727598 8727808 + 6.01 0.000 intron (NM_015210, intron 4 of 16) L1MEd|LINE|L1 10322 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr4-5550 chr4 134097340 134097550 + 6.01 0.000 Intergenic Intergenic 104344 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr6-6312 chr6 43793586 43793796 + 6.01 0.000 Intergenic Intergenic 21723 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr20-3422 chr20 44619914 44620124 + 6.01 0.000 TTS (NM_001281445) TTS (NM_001281445) 31680 NM_000022 100 Hs.654536 NM_000022 ENSG00000196839 ADA - adenosine deaminase protein-coding chr20-4096 chr20 40760466 40760676 + 6.01 0.000 Intergenic Intergenic -45948 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr22-1968 chr22 50339356 50339566 + 6.01 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -3866 NM_001351648 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr3-9952 chr3 94336381 94336591 + 6.01 0.000 Intergenic Intergenic 273425 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr17-7112 chr17 74809653 74809863 + 6.01 0.000 intron (NM_017728, intron 8 of 9) intron (NM_017728, intron 8 of 9) 33259 NM_001321264 54868 Hs.370262 NM_017728 ENSG00000109066 TMEM104 - transmembrane protein 104 protein-coding chr12-7921 chr12 108541648 108541858 + 6.01 0.000 intron (NM_014706, intron 6 of 18) AluSx3|SINE|Alu 19420 NM_014706 9733 Hs.584842 NM_014706 ENSG00000075856 SART3 DSAP1|P100|RP11-13G14|TIP110|p110|p110(nrb) spliceosome associated factor 3, U4/U6 recycling protein protein-coding chr2-8619 chr2 143559200 143559410 + 6.01 0.000 intron (NM_018460, intron 11 of 13) intron (NM_018460, intron 11 of 13) -377762 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr18-1794 chr18 12097797 12098007 + 6.01 0.000 intron (NM_001277333, intron 5 of 13) intron (NM_001277333, intron 5 of 13) 4059 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chrX-4159 chrX 31278032 31278242 + 6.01 0.000 intron (NM_000109, intron 62 of 78) (TG)n|Simple_repeat|Simple_repeat -11183 NM_004018 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr1-11264 chr1 3204955 3205165 + 6.01 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 77085 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr1-16231 chr1 209486846 209487056 + 6.01 0.000 Intergenic Intergenic 54818 NR_029622 406988 NR_029622 ENSG00000284485 MIR205 MIRN205|mir-205 microRNA 205 ncRNA chr1-9667 chr1 48526389 48526599 + 6.01 0.000 Intergenic Intergenic -54286 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr18-2499 chr18 57071764 57071974 + 6.01 0.000 intron (NR_048536, intron 1 of 3) HERVH-int|LTR|ERV1 250 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr7-7265 chr7 31550323 31550533 + 6.01 0.000 intron (NM_001257967, intron 2 of 14) intron (NM_001257967, intron 2 of 14) -2574 NM_194300 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr16-3096 chr16 67504689 67504899 + 6.01 0.000 Intergenic Intergenic -20981 NM_001138 181 Hs.104633 NM_001138 ENSG00000159723 AGRP AGRT|ART|ASIP2 agouti related neuropeptide protein-coding chr18-1480 chr18 61636017 61636227 + 6.01 0.000 Intergenic Intergenic -112054 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr5-8902 chr5 156700936 156701146 + 6.01 0.000 intron (NM_001128209, intron 6 of 7) L2|LINE|L2 -149254 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr15-5182 chr15 93191678 93191888 + 6.01 0.000 Intergenic L1MB2|LINE|L1 -14283 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr14-1379 chr14 32934445 32934655 + 6.01 0.000 Intergenic CpG -4329 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr1-15831 chr1 179516743 179516953 + 6.01 0.000 intron (NR_073544, intron 21 of 25) L1PB1|LINE|L1 59100 NM_001297575 7827 Hs.412710 NM_014625 ENSG00000116218 NPHS2 PDCN|SRN1 NPHS2 stomatin family member, podocin protein-coding chr17-6819 chr17 11085371 11085581 + 6.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR -155737 NM_001173462 388336 Hs.592124 NM_175903 ENSG00000188803 SHISA6 - shisa family member 6 protein-coding chr19-5771 chr19 29888497 29888707 + 6.01 0.000 Intergenic AluSq2|SINE|Alu -35055 NM_001252641 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr1-15085 chr1 97745132 97745342 + 6.01 0.000 intron (NM_000110, intron 3 of 22) intron (NM_000110, intron 3 of 22) -51684 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chrX-3528 chrX 53078285 53078495 + 6.01 0.000 3' UTR (NM_018969, exon 2 of 2) 3' UTR (NM_018969, exon 2 of 2) -3977 NM_022117 64061 Hs.136164 NM_022117 ENSG00000184205 TSPYL2 CDA1|CINAP|CTCL|DENTT|HRIHFB2216|NP79|SE204|TSPX TSPY like 2 protein-coding chr9-6705 chr9 137915020 137915230 + 6.01 0.000 intron (NM_001243812, intron 5 of 45) L2a|LINE|L2 -22555 NR_121583 100133077 Hs.640081 NR_121583 ENSG00000203987 LOC100133077 - uncharacterized LOC100133077 ncRNA chr7-9355 chr7 129596516 129596726 + 6.01 0.000 Intergenic L1MC3|LINE|L1 -15099 NM_001293163 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chrX-3867 chrX 3224888 3225098 + 6.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR -46827 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 LINC01546 CXorf28 long intergenic non-protein coding RNA 1546 ncRNA chr9-3140 chr9 96884169 96884379 + 6.01 0.000 Intergenic L1MDa|LINE|L1 15374 NR_038890 100132781 Hs.710921 NR_038890 LOC100132781 - cyclin Y like 1 pseudogene pseudo chr17-6219 chr17 13049273 13049483 + 6.01 0.000 Intergenic Intergenic -31314 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr1-10306 chr1 150963729 150963939 + 6.01 0.000 intron (NM_001366417, intron 20 of 21) intron (NM_001366417, intron 20 of 21) 11001 NM_022075 29956 Hs.744017 NM_013384 ENSG00000143418 CERS2 L3|LASS2|SP260|TMSG1 ceramide synthase 2 protein-coding chr20-2500 chr20 33450571 33450781 + 6.01 0.000 Intergenic AluSx|SINE|Alu -6784 NM_003098 6640 Hs.31121 NM_003098 ENSG00000101400 SNTA1 LQT12|SNT1|TACIP1|dJ1187J4.5 syntrophin alpha 1 protein-coding chrX-769 chrX 39759654 39759864 + 6.01 0.000 Intergenic Intergenic -77802 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr20-3315 chr20 17138409 17138619 + 6.01 0.000 Intergenic Intergenic -87593 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr11-7709 chr11 69680591 69680801 + 6.01 0.000 Intergenic AluJr4|SINE|Alu -5343 NM_153451 220064 Hs.667996 NM_153451 ENSG00000149716 LTO1 CIAB1|ORAOV1|TAOS1 LTO1 maturation factor of ABCE1 protein-coding chr6-8533 chr6 160458042 160458252 + 6.01 0.000 Intergenic Intergenic 52977 NR_028093 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr11-9735 chr11 68581933 68582143 + 6.01 0.000 intron (NR_147968, intron 14 of 23) intron (NR_147968, intron 14 of 23) -102506 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr6-6836 chr6 7640607 7640817 + 6.01 0.000 Intergenic Intergenic 50514 NM_152551 154007 Hs.13366 NM_152551 ENSG00000168566 SNRNP48 C6orf151|dJ336K20B.1|dJ512B11.2 small nuclear ribonucleoprotein U11/U12 subunit 48 protein-coding chr1-15397 chr1 151388583 151388793 + 6.01 0.000 Intergenic L1ME3G|LINE|L1 -10885 NM_002796 5692 Hs.89545 NM_002796 ENSG00000159377 PSMB4 HN3|HsN3|PRAAS3|PROS-26|PROS26 proteasome subunit beta 4 protein-coding chr9-8272 chr9 112644243 112644453 + 6.01 0.000 intron (NM_001287036, intron 3 of 4) (AGGTG)n|Simple_repeat|Simple_repeat 73769 NR_138054 58493 Hs.658575 NM_021218 ENSG00000148153 INIP C9orf80|HSPC043|MISE|SOSSC|SSBIP1|hSSBIP1 INTS3 and NABP interacting protein protein-coding chr20-3144 chr20 37111832 37112042 + 6.01 0.000 intron (NM_152503, intron 21 of 24) intron (NM_152503, intron 21 of 24) -15940 NM_001323281 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr5-6752 chr5 79938477 79938687 + 6.01 0.000 intron (NR_131226, intron 1 of 2) MLT1H|LTR|ERVL-MaLR 2003 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr20-3688 chr20 14209228 14209438 + 6.01 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) 128279 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr7-7221 chr7 22104854 22105064 + 6.01 0.000 Intergenic Intergenic 88786 NM_001367601 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr17-3539 chr17 74304929 74305139 + 6.01 0.000 intron (NM_023036, intron 8 of 13) intron (NM_023036, intron 8 of 13) -21192 NM_153209 124602 Hs.372773 NM_153209 ENSG00000196169 KIF19 KIF19A kinesin family member 19 protein-coding chr7-7633 chr7 138182781 138182991 + 6.01 0.000 Intergenic AluJr|SINE|Alu 59128 NR_039678 100616226 NR_039678 ENSG00000284028 MIR4468 - microRNA 4468 ncRNA chr7-6993 chr7 114508960 114509170 + 6.01 0.000 intron (NR_033767, intron 2 of 17) L2a|LINE|L2 82563 NM_001172767 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr9-6533 chr9 112029917 112030127 + 6.01 0.000 Intergenic Intergenic 97922 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr14-3316 chr14 86574323 86574533 + 6.01 0.000 Intergenic Intergenic -331350 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr12-6367 chr12 63182993 63183203 + 6.01 0.000 Intergenic MIR3|SINE|MIR -30288 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr1-13873 chr1 21494846 21495056 + 6.01 0.000 Intergenic MIR3|SINE|MIR -14033 NM_001369805 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr15-5152 chr15 91194086 91194296 + 6.01 0.000 intron (NM_001323040, intron 2 of 12) intron (NM_001323040, intron 2 of 12) 92395 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr19-3746 chr19 48655078 48655288 + 6.01 0.000 intron (NR_004401, intron 1 of 4) (TA)n|Simple_repeat|Simple_repeat -8996 NR_136241 770 Hs.428446 NM_001217 ENSG00000063180 CA11 CA-RP|CA-RP II|CA-XI|CARP-2|CARPX1 carbonic anhydrase 11 protein-coding chr13-3014 chr13 114289298 114289508 + 6.01 0.000 intron (NR_148488, intron 3 of 5) AluSc|SINE|Alu 7008 NM_001353648 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3A regulator of nonsense mediated mRNA decay protein-coding chr3-8309 chr3 62207630 62207840 + 6.01 0.000 intron (NM_002841, intron 12 of 29) intron (NM_002841, intron 12 of 29) 111212 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr1-10532 chr1 170395299 170395509 + 6.01 0.000 Intergenic L1MB3|LINE|L1 -111196 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr18-2972 chr18 23031532 23031742 + 6.01 0.000 Intergenic Intergenic 97761 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr4-8131 chr4 127081204 127081414 + 6.01 0.000 Intergenic Intergenic -551648 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr8-6777 chr8 93404172 93404382 + 6.01 0.000 intron (NR_033858, intron 7 of 10) intron (NR_033858, intron 7 of 10) -237427 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr1-8865 chr1 3763081 3763291 + 6.01 0.000 exon (NM_152492, exon 7 of 12) exon (NM_152492, exon 7 of 12) -9575 NM_001288583 388588 Hs.22047 NM_001163724 ENSG00000235169 SMIM1 Vel small integral membrane protein 1 (Vel blood group) protein-coding chrX-3670 chrX 104097201 104097411 + 6.01 0.000 Intergenic AluSg|SINE|Alu -15217 NM_001143978 644353 Hs.648338 NM_001143978 ENSG00000166707 ZCCHC18 PNMA7B|SIZN2 zinc finger CCHC-type containing 18 protein-coding chr2-13653 chr2 161414856 161415066 + 6.01 0.000 Intergenic Intergenic -1336 NM_006593 10716 Hs.210862 NM_006593 ENSG00000136535 TBR1 IDDAS|TBR-1|TES-56 T-box brain transcription factor 1 protein-coding chr1-15225 chr1 111333328 111333538 + 6.01 0.000 Intergenic L1MA4A|LINE|L1 -13127 NR_125338 128344 Hs.172510 NM_181643 ENSG00000173947 PIFO C1orf88|pitchfork primary cilia formation protein-coding chr10-6789 chr10 5148012 5148222 + 6.01 0.000 Intergenic Intergenic 37070 NR_027916 340811 Hs.282513 NM_001007536 ENSG00000264006 AKR1C8P AKR1CL1 aldo-keto reductase family 1 member C8, pseudogene pseudo chr5-6358 chr5 138253562 138253772 + 6.01 0.000 intron (NM_001496, intron 6 of 7) intron (NM_001496, intron 6 of 7) 20954 NM_001496 2676 Hs.58042 NM_001496 ENSG00000146013 GFRA3 GDNFR3 GDNF family receptor alpha 3 protein-coding chr20-4350 chr20 55340362 55340572 + 6.01 0.000 Intergenic Intergenic -82576 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA chr16-2609 chr16 1239027 1239237 + 6.01 0.000 Intergenic Intergenic -1573 NM_003294 7177 Hs.405479 NM_003294 ENSG00000172236 TPSAB1 TPS1|TPS2|TPSB1|TPSB2|Tryptase-2 tryptase alpha/beta 1 protein-coding chr13-2083 chr13 70250760 70250970 + 6.01 0.000 Intergenic AluSp|SINE|Alu -142372 NM_001286725 57626 Hs.508201 NM_020866 ENSG00000150361 KLHL1 MRP2 kelch like family member 1 protein-coding chr5-7630 chr5 50578739 50578949 + 6.01 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -87087 NM_001178055 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr7-6925 chr7 80451309 80451519 + 6.01 0.000 Intergenic MER39|LTR|ERV1 60650 NM_001102386 346562 Hs.335049 NM_001102386 ENSG00000214415 GNAT3 GDCA G protein subunit alpha transducin 3 protein-coding chr17-8495 chr17 78757886 78758096 + 6.01 0.000 intron (NM_004762, intron 1 of 12) L1M5|LINE|L1 -21089 NM_001365040 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr8-3522 chr8 117997929 117998139 + 6.01 0.000 intron (NM_000127, intron 1 of 10) AluSg7|SINE|Alu -77121 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr2-14620 chr2 234403240 234403450 + 6.01 0.000 Intergenic Intergenic 51250 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr8-5338 chr8 13715877 13716087 + 6.01 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 86292 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr14-5254 chr14 99662870 99663080 + 6.01 0.000 exon (NM_001127258, exon 6 of 9) exon (NM_001127258, exon 6 of 9) 17865 NM_032425 84439 Hs.131714 NM_032425 ENSG00000182218 HHIPL1 KIAA1822|UNQ9245 HHIP like 1 protein-coding chr2-11745 chr2 11109854 11110064 + 6.01 0.000 intron (NR_040080, intron 6 of 8) AluSc|SINE|Alu 22217 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr7-8412 chr7 45856663 45856873 + 6.01 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -31720 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding chr18-3109 chr18 36331901 36332111 + 6.01 0.000 intron (NM_001281740, intron 1 of 28) LTR41B|LTR|ERVL 34293 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr16-6364 chr16 51150501 51150711 + 6.01 0.000 promoter-TSS (NM_001127892) promoter-TSS (NM_001127892) -9 NM_001127892 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chrX-2061 chrX 19259088 19259298 + 6.01 0.000 Intergenic Intergenic -84700 NM_001173454 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr16-5993 chr16 6131904 6132114 + 6.01 0.000 intron (NM_018723, intron 1 of 15) intron (NM_018723, intron 1 of 15) 112306 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr4-5800 chr4 81887346 81887556 + 6.01 0.000 Intergenic L1PA16|LINE|L1 -415544 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr10-8305 chr10 78104626 78104836 + 6.01 0.000 Intergenic THE1A|LTR|ERVL-MaLR 70868 NM_001142285 6229 Hs.280130 NM_001026 ENSG00000138326 RPS24 DBA3|S24|eS24 ribosomal protein S24 protein-coding chrX-2393 chrX 71996842 71997052 + 6.01 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -47462 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr11-9154 chr11 34552639 34552849 + 6.01 0.000 Intergenic L1MDa|LINE|L1 -38950 NM_001243080 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr12-6240 chr12 37684302 37684512 + 6.01 0.000 Intergenic L1PA3|LINE|L1 -632367 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr10-8936 chr10 116627421 116627631 + 6.01 0.000 intron (NR_103727, intron 5 of 12) CpG 6573 NR_103727 5408 Hs.423598 NM_005396 ENSG00000266200 PNLIPRP2 PLRP2 pancreatic lipase related protein 2 (gene/pseudogene) protein-coding chr16-6575 chr16 66460477 66460687 + 6.01 0.000 intron (NM_001178020, intron 2 of 4) intron (NM_001178020, intron 2 of 4) 15820 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr9-4416 chr9 3177375 3177585 + 6.01 0.000 Intergenic MER74A|LTR|ERVL -4109 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr10-7560 chr10 16212120 16212330 + 6.01 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR -224718 NM_001261836 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr10-6602 chr10 88466970 88467180 + 6.01 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 116243 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr1-4226 chr1 158113484 158113694 + 6.01 0.000 Intergenic CpG 27051 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr2-13303 chr2 129795985 129796195 + 6.01 0.000 Intergenic Intergenic 81401 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr1-14368 chr1 42967302 42967512 + 6.01 0.000 intron (NR_033967, intron 1 of 3) intron (NR_033967, intron 1 of 3) 8358 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr11-9367 chr11 47535245 47535455 + 6.01 0.000 intron (NM_006560, intron 1 of 13) intron (NM_006560, intron 1 of 13) -10646 NM_001330272 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr21-1335 chr21 28111016 28111226 + 6.01 0.000 intron (NR_126010, intron 2 of 4) intron (NR_126010, intron 2 of 4) 20718 NR_126011 284825 Hs.651529 NR_126010 ENSG00000232079 LINC01697 - long intergenic non-protein coding RNA 1697 ncRNA chr10-3785 chr10 126539150 126539360 + 6.01 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) -17762 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr5-1501 chr5 132495904 132496114 + 6.01 0.000 Intergenic Intergenic -5236 NR_149069 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr12-6382 chr12 68259377 68259587 + 6.01 0.000 Intergenic Intergenic -5878 NM_020525 50616 Hs.287369 NM_020525 ENSG00000127318 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding chr9-6874 chr9 84852833 84853043 + 6.01 0.000 intron (NM_001018064, intron 12 of 17) intron (NM_001018064, intron 12 of 17) 147037 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr19-6781 chr19 40937276 40937486 + 6.01 0.000 intron (NR_001278, intron 3 of 8) intron (NR_001278, intron 3 of 8) 13116 NR_001278 1556 Hs.529117 NR_001278 ENSG00000256612 CYP2B7P CYP2B|CYP2B7|CYP2B7P1 cytochrome P450 family 2 subfamily B member 7, pseudogene pseudo chr1-10783 chr1 201519922 201520132 + 6.01 0.000 non-coding (NR_026667, exon 1 of 1) non-coding (NR_026667, exon 1 of 1) 123 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr2-9258 chr2 219706984 219707194 + 6.01 0.000 Intergenic Intergenic 79459 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr8-3642 chr8 4226001 4226211 + 6.01 0.000 intron (NM_033225, intron 3 of 69) (AC)n|Simple_repeat|Simple_repeat 768808 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr17-7047 chr17 62058520 62058730 + 6.01 0.000 intron (NM_005121, intron 2 of 29) intron (NM_005121, intron 2 of 29) 6653 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr10-6491 chr10 50052218 50052428 + 6.01 0.000 intron (NR_038275, intron 4 of 6) intron (NR_038275, intron 4 of 6) 15480 NR_038275 100421577 Hs.712902 NR_038275 ENSG00000235618 FAM21EP - family with sequence similarity 21, member A pseudogene pseudo chr20-3591 chr20 4227106 4227316 + 6.01 0.000 intron (NM_000678, intron 1 of 1) intron (NM_000678, intron 1 of 1) 22076 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr11-2968 chr11 79523662 79523872 + 6.01 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -82737 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr2-5467 chr2 127805993 127806203 + 6.01 0.000 intron (NM_001006622, intron 1 of 5) AluJb|SINE|Alu 5073 NM_001006623 55339 Hs.554831 NM_018383 ENSG00000136709 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding chr5-5508 chr5 142625221 142625431 + 6.01 0.000 intron (NM_001144935, intron 1 of 3) (AC)n|Simple_repeat|Simple_repeat -3992 NM_001257212 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr3-9257 chr3 39288554 39288764 + 6.01 0.000 Intergenic Intergenic -6924 NM_001171174 1524 Hs.78913 NM_001337 ENSG00000168329 CX3CR1 CCRL1|CMKBRL1|CMKDR1|GPR13|GPRV28|V28 C-X3-C motif chemokine receptor 1 protein-coding chr2-13918 chr2 182916296 182916506 + 6.01 0.000 3' UTR (NM_205842, exon 32 of 32) 3' UTR (NM_205842, exon 32 of 32) -49764 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr8-6500 chr8 65000116 65000326 + 6.01 0.000 Intergenic L2|LINE|L2 180119 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA chr7-8477 chr7 49716565 49716775 + 6.01 0.000 Intergenic Intergenic -56968 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr18-2471 chr18 44020263 44020473 + 6.01 0.000 Intergenic Intergenic 511329 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA chr4-7366 chr4 59784738 59784948 + 6.01 0.000 Intergenic L1PA7|LINE|L1 771270 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr20-4347 chr20 54547315 54547525 + 6.01 0.000 intron (NM_018431, intron 1 of 7) intron (NM_018431, intron 1 of 7) 71827 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr8-5697 chr8 125768867 125769077 + 6.01 0.000 Intergenic Intergenic 182225 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr10-6425 chr10 18930368 18930578 + 6.01 0.000 Intergenic Intergenic -118328 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr8-5537 chr8 69192639 69192849 + 6.01 0.000 Intergenic Intergenic -88554 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr15-2470 chr15 85763942 85764152 + 6.01 0.000 intron (NM_022480, intron 2 of 2) intron (NM_022480, intron 2 of 2) -5322 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr3-4104 chr3 107988600 107988810 + 6.01 0.000 Intergenic Intergenic 102383 NM_198793 961 Hs.446414 NM_001777 ENSG00000196776 CD47 IAP|MER6|OA3 CD47 molecule protein-coding chr10-8333 chr10 79234488 79234698 + 6.01 0.000 intron (NM_020338, intron 7 of 24) HAL1b|LINE|L1 -112876 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr15-4110 chr15 77913930 77914140 + 6.01 0.000 TTS (NR_027024) TTS (NR_027024) 12811 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr6-4536 chr6 39841384 39841594 + 6.01 0.000 intron (NM_015345, intron 1 of 24) intron (NM_015345, intron 1 of 24) 48492 NM_015345 23500 Hs.357128 NM_015345 ENSG00000146122 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding chr3-2595 chr3 143865366 143865576 + 6.01 0.000 Intergenic Intergenic -17003 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr1-15005 chr1 92230643 92230853 + 6.01 0.000 intron (NM_001012425, intron 1 of 5) AluJr4|SINE|Alu 12833 NM_001012425 388649 Hs.558823 NM_001012425 ENSG00000203910 C1orf146 - chromosome 1 open reading frame 146 protein-coding chr1-15024 chr1 93099402 93099612 + 6.01 0.000 intron (NM_001164393, intron 1 of 12) HAL1ME|LINE|L1 20224 NM_007358 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr9-8507 chr9 124908211 124908421 + 6.01 0.000 intron (NM_002077, intron 12 of 22) intron (NM_002077, intron 12 of 22) 32767 NM_002077 2800 Hs.59504 NM_002077 ENSG00000136935 GOLGA1 golgin-97 golgin A1 protein-coding chr3-10777 chr3 158068506 158068716 + 6.01 0.000 Intergenic L1P2|LINE|L1 37552 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr18-1641 chr18 56471670 56471880 + 6.01 0.000 Intergenic AluSx|SINE|Alu 166817 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr6-4898 chr6 93419103 93419313 + 6.01 0.000 intron (NM_004440, intron 1 of 16) CpG 351 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr3-8759 chr3 2624770 2624980 + 6.01 0.000 intron (NM_175607, intron 4 of 24) AluSz|SINE|Alu -267340 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr2-9941 chr2 240822826 240823036 + 6.01 0.000 Intergenic L1M5|LINE|L1 -2623 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr21-1395 chr21 44284198 44284408 + 6.01 0.000 Intergenic Intergenic -1573 NM_000383 326 Hs.129829 NM_000383 ENSG00000160224 AIRE AIRE1|APECED|APS1|APSI|PGA1 autoimmune regulator protein-coding chr7-5735 chr7 73572357 73572567 + 6.01 0.000 intron (NM_001362662, intron 6 of 7) AluJb|SINE|Alu 5925 NM_001362663 26608 Hs.647044 NM_012453 ENSG00000106638 TBL2 WBSCR13|WS-betaTRP transducin beta like 2 protein-coding chr9-4498 chr9 37937020 37937230 + 6.01 0.000 intron (NM_003028, intron 5 of 5) L2b|LINE|L2 -32772 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr4-5490 chr4 77255933 77256143 + 6.01 0.000 Intergenic Intergenic 98831 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr9-6727 chr9 9456985 9457195 + 6.01 0.000 intron (NM_002839, intron 8 of 45) intron (NM_002839, intron 8 of 45) -342302 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr3-6803 chr3 145289624 145289834 + 6.01 0.000 Intergenic L1MA5|LINE|L1 779456 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr6-4089 chr6 143621908 143622118 + 6.01 0.000 intron (NM_014721, intron 1 of 12) Tigger15a|DNA|TcMar-Tigger 13833 NM_001100166 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr4-6058 chr4 6264237 6264447 + 6.01 0.000 Intergenic Intergenic -5508 NM_001145853 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr2-14436 chr2 222494746 222494956 + 6.01 0.000 intron (NM_152386, intron 2 of 4) intron (NM_152386, intron 2 of 4) 70308 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr9-7714 chr9 73074182 73074392 + 6.01 0.000 Intergenic Intergenic -77578 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr9-4379 chr9 134618680 134618890 + 6.01 0.000 Intergenic Intergenic -23020 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr20-3868 chr20 28824928 28825138 + 6.01 0.000 Intergenic ALR/Alpha|Satellite|centr -222368 NR_132315 100289097 Hs.529357 NR_132315 ENSG00000282826 FRG1CP - FSHD region gene 1 family member C, pseudogene pseudo chr13-3238 chr13 30376274 30376484 + 6.01 0.000 Intergenic Intergenic -2465 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr13-3231 chr13 27981715 27981925 + 6.01 0.000 intron (NM_001105577, intron 1 of 1) L2b|LINE|L2 6817 NM_001105577 646625 Hs.705356 NM_001105577 ENSG00000183463 URAD PRHOXNB ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase protein-coding chr9-8418 chr9 120919010 120919220 + 6.01 0.000 intron (NM_001190945, intron 4 of 8) intron (NM_001190945, intron 4 of 8) -4543 NM_001190947 7185 Hs.531251 NM_005658 ENSG00000056558 TRAF1 EBI6|MGC:10353 TNF receptor associated factor 1 protein-coding chr14-5185 chr14 92849837 92850047 + 6.01 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 55637 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr3-7798 chr3 88188100 88188310 + 6.01 0.000 Intergenic Charlie2b|DNA|hAT-Charlie 38246 NM_173824 285237 Hs.476944 NM_173824 ENSG00000179021 C3orf38 - chromosome 3 open reading frame 38 protein-coding chr11-3505 chr11 129612548 129612758 + 6.01 0.000 intron (NR_120582, intron 3 of 3) intron (NR_120582, intron 3 of 3) 4616 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr7-4796 chr7 89879316 89879526 + 6.01 0.000 Intergenic AluJb|SINE|Alu -239979 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr17-3632 chr17 2884284 2884494 + 6.01 0.000 intron (NM_001330058, intron 2 of 24) AluSx|SINE|Alu 81506 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr3-9174 chr3 34067337 34067547 + 6.01 0.000 Intergenic Intergenic 268812 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr16-5577 chr16 47460242 47460452 + 6.01 0.000 promoter-TSS (NM_000293) promoter-TSS (NM_000293) 716 NM_030790 81533 Hs.42217 NM_030790 ENSG00000129636 ITFG1 2310047C21Rik|CDA08|LNKN-1|TIP integrin alpha FG-GAP repeat containing 1 protein-coding chr4-7014 chr4 24747567 24747777 + 6.01 0.000 Intergenic Intergenic -47901 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr20-1641 chr20 19786425 19786635 + 6.01 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -99991 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr2-12029 chr2 29166222 29166432 + 6.01 0.000 intron (NM_001287528, intron 13 of 14) L2c|LINE|L2 50912 NM_001287527 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr3-10543 chr3 140267672 140267882 + 6.01 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 241012 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr8-3883 chr8 38223471 38223681 + 6.01 0.000 Intergenic Intergenic -7915 NM_001164234 23259 Hs.434966 NM_015214 ENSG00000085788 DDHD2 SAMWD1|SPG54|iPLA(1)gamma DDHD domain containing 2 protein-coding chrX-5324 chrX 145826351 145826561 + 6.01 0.000 TTS (NM_001144008) TTS (NM_001144008) 5108 NM_001144006 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr9-8337 chr9 115636784 115636994 + 6.01 0.000 Intergenic Intergenic 107350 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr9-6567 chr9 121972195 121972405 + 6.01 0.000 intron (NM_001139442, intron 6 of 8) intron (NM_001139442, intron 6 of 8) 121306 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr9-6809 chr9 35575471 35575681 + 6.01 0.000 Intergenic MER66-int|LTR|ERV1 -11698 NM_001287238 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr10-4339 chr10 29039842 29040052 + 6.01 0.000 Intergenic Intergenic 193539 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr20-1808 chr20 62531560 62531770 + 6.01 0.000 Intergenic Intergenic -18788 NM_178463 128826 Hs.86507 NM_178463 MIR1-1HG C20orf166|MIR133A2HG MIR1-1 host gene protein-coding chr8-2390 chr8 53291382 53291592 + 6.01 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -39790 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr20-3723 chr20 17064888 17065098 + 6.01 0.000 Intergenic Intergenic -161114 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr10-6934 chr10 52651248 52651458 + 6.01 0.000 intron (NR_155748, intron 1 of 2) intron (NR_155748, intron 1 of 2) 104051 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA chr12-5691 chr12 107402492 107402702 + 6.01 0.000 intron (NM_001347944, intron 1 of 14) intron (NM_001347944, intron 1 of 14) 82009 NM_001347944 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr12-6821 chr12 13038559 13038769 + 6.01 0.000 Intergenic Intergenic -5717 NM_020853 57613 Hs.132660 NM_020853 ENSG00000084444 FAM234B KIAA1467 family with sequence similarity 234 member B protein-coding chr8-7044 chr8 113328560 113328770 + 6.01 0.000 intron (NM_001363185, intron 1 of 66) L1MB7|LINE|L1 48487 NM_198124 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr5-7952 chr5 80570399 80570609 + 6.01 0.000 promoter-TSS (NM_001004441) promoter-TSS (NM_001004441) -224 NM_001004441 340120 Hs.519404 NM_001004441 ENSG00000189127 ANKRD34B DP58 ankyrin repeat domain 34B protein-coding chr13-3180 chr13 110240301 110240511 + 6.01 0.000 intron (NM_001845, intron 2 of 51) intron (NM_001845, intron 2 of 51) 66751 NM_001303110 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr10-7159 chr10 103020772 103020982 + 6.01 0.000 intron (NM_199076, intron 1 of 6) L2a|LINE|L2 -102542 NR_160733 107984265 NR_160733 LOC107984265 - uncharacterized LOC107984265 ncRNA chr6-7877 chr6 107296717 107296927 + 6.01 0.000 intron (NM_020381, intron 2 of 7) intron (NM_020381, intron 2 of 7) 162742 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr4-5855 chr4 114672374 114672584 + 6.01 0.000 intron (NM_003360, intron 4 of 4) L1PA8A|LINE|L1 15720 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chr4-7852 chr4 102557371 102557581 + 6.01 0.000 intron (NM_003998, intron 5 of 23) intron (NM_003998, intron 5 of 23) -54990 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chr7-4704 chr7 45709744 45709954 + 6.01 0.000 intron (NM_021116, intron 18 of 19) MIRc|SINE|MIR 59169 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr1-15954 chr1 191406344 191406554 + 6.01 0.000 Intergenic Intergenic -177951 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr6-3764 chr6 14743794 14744004 + 6.01 0.000 Intergenic Intergenic -458445 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr4-6048 chr4 3838669 3838879 + 6.01 0.000 Intergenic Intergenic 72389 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr18-2777 chr18 1621503 1621713 + 6.01 0.000 Intergenic L1MC3|LINE|L1 -261979 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr3-9076 chr3 27294015 27294225 + 6.01 0.000 intron (NM_152534, intron 16 of 38) intron (NM_152534, intron 16 of 38) 75263 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr4-6200 chr4 51895101 51895311 + 6.01 0.000 intron (NM_001040402, intron 7 of 10) intron (NM_001040402, intron 7 of 10) 51627 NM_001287755 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr14-3260 chr14 77769410 77769620 + 6.01 0.000 non-coding (NR_161323, exon 3 of 3) non-coding (NR_161323, exon 3 of 3) -8359 NM_012245 22938 Hs.445498 NM_012245 ENSG00000100603 SNW1 Bx42|FUN20|NCOA-62|PRPF45|Prp45|SKIIP|SKIP|SKIP1 SNW domain containing 1 protein-coding chr19-4847 chr19 38219620 38219830 + 6.01 0.000 intron (NM_001135155, intron 3 of 11) AluJb|SINE|Alu 4525 NM_001289978 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr2-14476 chr2 224925654 224925864 + 6.01 0.000 intron (NM_001290263, intron 2 of 55) intron (NM_001290263, intron 2 of 55) 21290 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr8-6094 chr8 27232018 27232228 + 6.01 0.000 Intergenic Intergenic 26281 NM_001283054 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding chr22-3116 chr22 19333049 19333259 + 6.01 0.000 intron (NM_003325, intron 24 of 24) AluJb|SINE|Alu -41435 NM_007098 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr6-5183 chr6 130106677 130106887 + 6.01 0.000 intron (NM_001007102, intron 18 of 21) intron (NM_001007102, intron 18 of 21) 87138 NM_001346550 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr20-4268 chr20 49508993 49509203 + 6.01 0.000 intron (NM_000961, intron 9 of 9) MIR|SINE|MIR -26430 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr3-6531 chr3 117462642 117462852 + 6.01 0.000 Intergenic L1PA15|LINE|L1 228178 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr16-3848 chr16 66767709 66767919 + 6.01 0.000 intron (NM_001136505, intron 15 of 18) AluSx1|SINE|Alu -15986 NR_136658 1783 Hs.369068 NM_006141 ENSG00000135720 DYNC1LI2 DNCLI2|LIC2 dynein cytoplasmic 1 light intermediate chain 2 protein-coding chr4-7975 chr4 113288789 113288999 + 6.01 0.000 intron (NM_001354275, intron 21 of 43) intron (NM_001354275, intron 21 of 43) -3945 NM_001354281 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr22-3733 chr22 26007842 26008052 + 6.01 0.000 intron (NM_001318245, intron 42 of 43) L1ME3G|LINE|L1 -161515 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr8-6955 chr8 106011334 106011544 + 6.01 0.000 intron (NR_125797, intron 1 of 4) L1ME2|LINE|L1 49064 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chrX-3710 chrX 114451866 114452076 + 6.01 0.000 Intergenic Intergenic -132107 NM_001256760 3358 Hs.149037 NM_000868 ENSG00000147246 HTR2C 5-HT1C|5-HT2C|5-HTR2C|5HTR2C|HTR1C 5-hydroxytryptamine receptor 2C protein-coding chr1-12175 chr1 188314562 188314772 + 6.01 0.000 Intergenic Intergenic 871039 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr6-6080 chr6 143958919 143959129 + 6.01 0.000 intron (NM_001289047, intron 2 of 3) intron (NM_001289047, intron 2 of 3) 2386 NM_001317157 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr7-6757 chr7 11831160 11831370 + 6.01 0.000 intron (NM_015204, intron 1 of 26) intron (NM_015204, intron 1 of 26) 933 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr5-5175 chr5 110250810 110251020 + 6.01 0.000 Intergenic Intergenic 263000 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr20-3108 chr20 31504213 31504423 + 6.01 0.000 Intergenic AluJr|SINE|Alu -10092 NM_178580 81502 Hs.373741 NM_030789 ENSG00000101294 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 histocompatibility minor 13 protein-coding chr1-10567 chr1 174082649 174082859 + 6.01 0.000 Intergenic AluSq|SINE|Alu 76533 NR_121197 102724601 Hs.563791 NR_121197 ENSG00000227373 RABGAP1L-DT - RABGAP1L divergent transcript ncRNA chrX-2114 chrX 26776308 26776518 + 6.01 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 218076 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr2-14523 chr2 228968721 228968931 + 6.01 0.000 Intergenic L1M6|LINE|L1 263266 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr10-4896 chr10 19911501 19911711 + 6.01 0.000 intron (NM_032812, intron 1 of 13) MIR3|SINE|MIR 95174 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr4-7945 chr4 109677504 109677714 + 6.01 0.000 intron (NM_017918, intron 4 of 7) MSTD|LTR|ERVL-MaLR 25836 NR_133012 839 Hs.654616 NM_001226 ENSG00000138794 CASP6 MCH2 caspase 6 protein-coding chr2-5730 chr2 217036027 217036237 + 6.01 0.000 Intergenic Intergenic 165360 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr3-7225 chr3 194296503 194296713 + 6.01 0.000 Intergenic Intergenic 16196 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr14-3869 chr14 88211833 88212043 + 6.01 0.000 intron (NM_138317, intron 4 of 6) intron (NM_138317, intron 4 of 6) 58973 NM_138318 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr7-6224 chr7 131591775 131591985 + 6.01 0.000 Intergenic LTR16E2|LTR|ERVL -35252 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr2-8040 chr2 71303120 71303330 + 6.01 0.000 Intergenic AluY|SINE|Alu -28530 NM_001252613 27332 Hs.434401 NM_014497 ENSG00000075292 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding chr4-6752 chr4 6123621 6123831 + 6.01 0.000 intron (NM_144720, intron 1 of 12) AluJr|SINE|Alu 70893 NM_001306134 152789 Hs.479066 NM_144720 ENSG00000152969 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding chr7-7335 chr7 47995488 47995698 + 6.01 0.000 intron (NM_001030019, intron 7 of 9) intron (NM_001030019, intron 7 of 9) -15978 NM_004507 3364 Hs.152983 NM_004507 ENSG00000136273 HUS1 hHUS1 HUS1 checkpoint clamp component protein-coding chr20-2410 chr20 20354601 20354811 + 6.01 0.000 intron (NM_015585, intron 26 of 26) intron (NM_015585, intron 26 of 26) -13398 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr12-7612 chr12 79336047 79336257 + 6.01 0.000 intron (NM_001291901, intron 7 of 9) intron (NM_001291901, intron 7 of 9) -83105 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr17-6296 chr17 49291353 49291563 + 6.01 0.000 non-coding (NR_135579, exon 8 of 8) non-coding (NR_135579, exon 8 of 8) -3004 NR_106745 102465137 NR_106745 ENSG00000273500 MIR6129 hsa-mir-6129 microRNA 6129 ncRNA chr6-7706 chr6 87723119 87723329 + 6.01 0.000 Intergenic Intergenic -20991 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr3-7616 chr3 17134868 17135078 + 6.01 0.000 Intergenic Intergenic 201777 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA chr15-4307 chr15 39238733 39238943 + 6.01 0.000 Intergenic Intergenic -11831 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr20-1453 chr20 62020322 62020532 + 6.01 0.000 intron (NM_003185, intron 1 of 14) intron (NM_003185, intron 1 of 14) -44375 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr17-7777 chr17 38983046 38983256 + 6.01 0.000 Intergenic Intergenic -15748 NM_001008777 494188 Hs.549536 NM_001008777 ENSG00000204952 FBXO47 - F-box protein 47 protein-coding chr19-2878 chr19 28871422 28871632 + 6.01 0.000 Intergenic Intergenic -93604 NR_027318 148145 Hs.112651 NR_027318 ENSG00000267339 LINC00906 - long intergenic non-protein coding RNA 906 ncRNA chr5-7408 chr5 26351138 26351348 + 6.01 0.000 Intergenic MLT2D|LTR|ERVL 687343 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr20-4487 chr20 62990321 62990531 + 6.01 0.000 Intergenic Intergenic 16538 NM_080606 128408 Hs.551230 NM_080606 ENSG00000125533 BHLHE23 BETA4|BHLHB4|Beta3b|bA305P22.3 basic helix-loop-helix family member e23 protein-coding chr6-7394 chr6 50756777 50756987 + 6.01 0.000 intron (NM_172238, intron 7 of 7) intron (NM_172238, intron 7 of 7) 43338 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr4-6376 chr4 109133747 109133957 + 6.01 0.000 intron (NM_198721, intron 3 of 36) L2c|LINE|L2 168806 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr2-9664 chr2 28567286 28567496 + 6.01 0.000 intron (NR_138141, intron 1 of 35) intron (NR_138141, intron 1 of 35) 1034 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr3-4684 chr3 48336577 48336787 + 6.01 0.000 Intergenic Charlie2b|DNA|hAT-Charlie -8341 NM_001080525 646424 Hs.257687 NM_001080525 ENSG00000229453 SPINK8 - serine peptidase inhibitor, Kazal type 8 (putative) protein-coding chr8-1655 chr8 14188786 14188996 + 6.01 0.000 intron (NM_139167, intron 4 of 7) AluSq2|SINE|Alu 559201 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr22-4241 chr22 47098467 47098677 + 6.01 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -182530 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr3-11137 chr3 187769357 187769567 + 6.01 0.000 Intergenic L2a|LINE|L2 -23994 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr1-15372 chr1 150460135 150460345 + 6.01 0.000 exon (NM_001297673, exon 8 of 11) exon (NM_001297673, exon 8 of 11) -27179 NR_073513 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr9-7140 chr9 132717526 132717736 + 6.01 0.000 Intergenic L1ME3G|LINE|L1 47167 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr19-3005 chr19 45878954 45879164 + 6.01 0.000 Intergenic Intergenic 7082 NM_015649 26145 Hs.515477 NM_015649 ENSG00000170604 IRF2BP1 - interferon regulatory factor 2 binding protein 1 protein-coding chr12-5798 chr12 16358854 16359064 + 6.01 0.000 intron (NM_001267598, intron 3 of 3) LTR85a|LTR|Gypsy? 5542 NM_145764 4257 Hs.389700 NM_020300 ENSG00000008394 MGST1 GST12|MGST|MGST-I microsomal glutathione S-transferase 1 protein-coding chr1-16377 chr1 221816920 221817130 + 6.01 0.000 Intergenic Intergenic 23641 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr1-16435 chr1 226713093 226713303 + 6.01 0.000 intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) 25977 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr2-12837 chr2 96082392 96082602 + 6.01 0.000 Intergenic Intergenic 34074 NM_000682 151 Hs.247686 NM_000682 ENSG00000274286 ADRA2B ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR adrenoceptor alpha 2B protein-coding chr5-7966 chr5 82023971 82024181 + 6.01 0.000 intron (NM_031482, intron 2 of 7) intron (NM_031482, intron 2 of 7) 52053 NM_031482 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding chr10-8552 chr10 93709760 93709970 + 6.01 0.000 Intergenic L1MA8|LINE|L1 -6906 NM_001347714 118924 Hs.586650 NM_145246 ENSG00000148690 FRA10AC1 C10orf4|F26C11.1-like|FRA10A FRA10A associated CGG repeat 1 protein-coding chr15-1337 chr15 37661330 37661540 + 6.01 0.000 Intergenic L1PREC2|LINE|L1 -273172 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr16-7034 chr16 88170769 88170979 + 6.01 0.000 Intergenic L1MA9|LINE|L1 -23407 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr10-5727 chr10 101252281 101252491 + 6.01 0.000 TTS (NR_120621) TTS (NR_120621) 11164 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr22-1531 chr22 20967060 20967270 + 6.01 0.000 promoter-TSS (NM_001146288) promoter-TSS (NM_001146288) -90 NR_027464 150209 Hs.723246 NM_144704 ENSG00000183773 AIFM3 AIFL apoptosis inducing factor mitochondria associated 3 protein-coding chr18-3277 chr18 52226445 52226655 + 6.01 0.000 Intergenic Intergenic -113647 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr8-4741 chr8 142340705 142340915 + 6.01 0.000 intron (NM_001291931, intron 2 of 10) intron (NM_001291931, intron 2 of 10) 62372 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr4-5935 chr4 152098870 152099080 + 6.01 0.000 Intergenic Intergenic -1778 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr7-8123 chr7 26989965 26990175 + 6.01 0.000 Intergenic Intergenic 105930 NM_153620 3198 Hs.67397 NM_005522 ENSG00000105991 HOXA1 BSAS|HOX1|HOX1F homeobox A1 protein-coding chr15-3116 chr15 65195121 65195331 + 6.01 0.000 3' UTR (NM_003613, exon 9 of 9) 3' UTR (NM_003613, exon 9 of 9) -9884 NM_006660 10845 Hs.113823 NM_006660 ENSG00000166855 CLPX EPP2 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding chr7-9256 chr7 123410607 123410817 + 6.01 0.000 Intergenic Intergenic 122236 NM_001282855 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr4-3904 chr4 148070731 148070941 + 6.01 0.000 intron (NM_024605, intron 22 of 22) intron (NM_024605, intron 22 of 22) 288241 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr2-11226 chr2 163253470 163253680 + 6.01 0.000 Intergenic Intergenic -414808 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr11-9333 chr11 46333164 46333374 + 6.01 0.000 5' UTR (NM_201532, exon 1 of 31) 5' UTR (NM_201532, exon 1 of 31) 343 NM_201532 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chrX-4507 chrX 65588011 65588221 + 6.01 0.000 Intergenic Intergenic -35695 NR_033742 83957 Hs.652967 NR_033742 ENSG00000227942 FRMD8P1 - FERM domain containing 8 pseudogene 1 pseudo chr9-6497 chr9 98159020 98159230 + 6.01 0.000 intron (NM_052820, intron 1 of 11) AluJr4|SINE|Alu 13767 NM_003389 7464 Hs.113094 NM_003389 ENSG00000106789 CORO2A CLIPINB|IR10|WDR2 coronin 2A protein-coding chrX-3415 chrX 11920661 11920871 + 6.01 0.000 intron (NM_001368398, intron 3 of 18) MIRb|SINE|MIR 98327 NM_001368398 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr15-5002 chr15 80833775 80833985 + 6.01 0.000 intron (NM_018689, intron 1 of 28) AluSz6|SINE|Alu 8193 NR_030393 693132 NR_030393 ENSG00000208003 MIR549A MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a microRNA 549a ncRNA chr22-3928 chr22 36672028 36672238 + 6.01 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 30725 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr17-7450 chr17 13094337 13094547 + 6.01 0.000 Intergenic Intergenic -76378 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr8-7329 chr8 133858258 133858468 + 6.01 0.000 Intergenic LTR45|LTR|ERV1 -28133 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr2-12934 chr2 101819387 101819597 + 6.01 0.000 intron (NM_145686, intron 3 of 30) intron (NM_145686, intron 3 of 30) 121785 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr7-7252 chr7 28846102 28846312 + 6.01 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 112123 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr4-7495 chr4 73397008 73397218 + 6.01 0.000 Intergenic Intergenic -7174 NM_000477 213 Hs.418167 NM_000477 ENSG00000163631 ALB HSA|PRO0883|PRO0903|PRO1341 albumin protein-coding chr20-4369 chr20 56648624 56648834 + 6.01 0.000 Intergenic AluJr|SINE|Alu 19423 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr7-5955 chr7 100577610 100577820 + 6.01 0.000 exon (NM_002319, exon 9 of 18) exon (NM_002319, exon 9 of 18) -2496 NM_001289933 101927655 Hs.125742 NM_001289933 ZASP - ZO-2 associated speckle protein protein-coding chr4-7285 chr4 52241376 52241586 + 6.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 190177 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr9-8937 chr9 137342402 137342612 + 6.01 0.000 intron (NM_017820, intron 17 of 21) MER68|LTR|ERVL -40236 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chrX-4752 chrX 94622644 94622854 + 6.01 0.000 Intergenic L1PA10|LINE|L1 440477 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr5-8877 chr5 154779848 154780058 + 6.01 0.000 intron (NM_001367719, intron 1 of 18) intron (NM_001367719, intron 1 of 18) 22799 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr7-8472 chr7 48889249 48889459 + 6.01 0.000 Intergenic Intergenic -35193 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr20-2763 chr20 51425850 51426060 + 6.01 0.000 intron (NM_012340, intron 9 of 10) intron (NM_012340, intron 9 of 10) 27022 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr13-3402 chr13 93298683 93298893 + 6.01 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 71981 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr12-2044 chr12 84313447 84313657 + 6.01 0.000 Intergenic Intergenic 599247 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr4-4102 chr4 5996675 5996885 + 6.01 0.000 intron (NM_001364690, intron 2 of 10) intron (NM_001364690, intron 2 of 10) 21766 NM_001364689 389197 Hs.479065 NM_207405 ENSG00000181215 C4orf50 - chromosome 4 open reading frame 50 protein-coding chr10-8476 chr10 88819305 88819515 + 6.01 0.000 TTS (NM_144590) TTS (NM_144590) 16680 NM_001128215 340654 Hs.55118 NM_001128215 ENSG00000173239 LIPM LIPL3|bA304I5.1 lipase family member M protein-coding chr6-8194 chr6 133922171 133922381 + 6.01 0.000 Intergenic Intergenic -29894 NM_001253676 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr6-8438 chr6 152681603 152681813 + 6.01 0.000 Intergenic L1ME5|LINE|L1 -16187 NM_025107 80177 Hs.18160 NM_025107 ENSG00000120279 MYCT1 MTLC MYC target 1 protein-coding chr7-7687 chr7 155526448 155526658 + 6.01 0.000 intron (NM_001369813, intron 2 of 4) L1M5|LINE|L1 7309 NR_163158 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr2-8293 chr2 103809430 103809640 + 6.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR 598797 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr5-4673 chr5 38013164 38013374 + 6.01 0.000 Intergenic Charlie15b|DNA|hAT-Charlie -12428 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr8-5224 chr8 120007514 120007724 + 6.01 0.000 intron (NM_022783, intron 7 of 8) intron (NM_022783, intron 7 of 8) -117483 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr3-8704 chr3 187235535 187235745 + 6.01 0.000 non-coding (NR_033519, exon 10 of 10) non-coding (NR_033519, exon 10 of 10) -28011 NR_110052 101929106 Hs.640145 NR_110052 ENSG00000198491 LOC101929106 - uncharacterized LOC101929106 ncRNA chr3-8288 chr3 55897550 55897760 + 6.01 0.000 intron (NR_132749, intron 12 of 17) intron (NR_132749, intron 12 of 17) -45061 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr11-10750 chr11 133584111 133584321 + 6.01 0.000 Intergenic Intergenic -51715 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr11-9870 chr11 73773516 73773726 + 6.01 0.000 Intergenic Intergenic -12547 NM_002869 5870 Hs.503222 NM_002869 ENSG00000175582 RAB6A RAB6 RAB6A, member RAS oncogene family protein-coding chr10-5529 chr10 85189647 85189857 + 6.01 0.000 Intergenic MER41-int|LTR|ERV1 9153 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr1-15920 chr1 186175649 186175859 + 6.01 0.000 intron (NM_031935, intron 103 of 106) AluSq|SINE|Alu -120519 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr18-1748 chr18 7453176 7453386 + 6.01 0.000 Intergenic MER5B|DNA|hAT-Charlie 7725 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr11-8446 chr11 113338691 113338901 + 6.01 0.000 non-coding (NR_147891, exon 9 of 23) non-coding (NR_147891, exon 9 of 23) 24213 NM_001318533 54970 Hs.288772 NM_017868 ENSG00000149292 TTC12 TPARM tetratricopeptide repeat domain 12 protein-coding chr20-2154 chr20 38231603 38231813 + 6.01 0.000 intron (NR_145960, intron 2 of 10) MIRb|SINE|MIR -28467 NR_104170 149684 Hs.628250 NR_104170 ENSG00000285347 LOC149684 - uncharacterized LOC149684 ncRNA chr4-5487 chr4 74716188 74716398 + 6.01 0.000 Intergenic Intergenic 78230 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr2-12615 chr2 71850449 71850659 + 6.01 0.000 Intergenic Intergenic 297308 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr5-6186 chr5 60677660 60677870 + 6.01 0.000 intron (NM_001145208, intron 2 of 9) MIR3|SINE|MIR 22401 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr5-2144 chr5 87390833 87391043 + 6.01 0.000 non-coding (NR_157071, exon 8 of 8) non-coding (NR_157071, exon 8 of 8) 21966 NM_001199189 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr7-9002 chr7 100784841 100785051 + 6.01 0.000 intron (NR_111919, intron 36 of 46) intron (NR_111919, intron 36 of 46) -41923 NM_001363494 56996 Hs.521087 NM_020246 ENSG00000146828 SLC12A9 CCC6|CIP1|WO3.3|hCCC6 solute carrier family 12 member 9 protein-coding chr3-9345 chr3 46433547 46433757 + 6.01 0.000 Intergenic Intergenic -9985 NR_151704 105377068 NR_151704 ENSG00000283646 LINC02009 - long intergenic non-protein coding RNA 2009 ncRNA chr11-5615 chr11 117770922 117771132 + 6.01 0.000 intron (NM_020693, intron 3 of 32) MIR3|SINE|MIR 26189 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr9-7784 chr9 78463778 78463988 + 6.01 0.000 Intergenic MER1A|DNA|hAT-Charlie 166758 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr1-11238 chr1 247272821 247273031 + 6.01 0.000 Intergenic L1M1|LINE|L1 16854 NM_173858 317705 Hs.553686 NM_173858 ENSG00000197617 VN1R5 V1RL5 vomeronasal 1 receptor 5 (gene/pseudogene) protein-coding chr5-3642 chr5 141794095 141794305 + 6.01 0.000 Intergenic AluSx1|SINE|Alu 72002 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chrX-3828 chrX 150525664 150525874 + 6.01 0.000 Intergenic Intergenic -42828 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr3-9202 chr3 37021628 37021838 + 6.01 0.000 intron (NM_001167617, intron 11 of 18) intron (NM_001167617, intron 11 of 18) 28383 NM_001354626 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding chr5-3982 chr5 14326437 14326647 + 6.01 0.000 intron (NM_007118, intron 9 of 56) intron (NM_007118, intron 9 of 56) -137441 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr3-8172 chr3 37609584 37609794 + 6.01 0.000 intron (NM_002207, intron 15 of 27) MLT1G|LTR|ERVL-MaLR 157548 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr11-10597 chr11 124053361 124053571 + 6.01 0.000 Intergenic Intergenic -14465 NM_001004463 390265 Hs.553761 NM_001004463 ENSG00000182634 OR10G7 OR11-283 olfactory receptor family 10 subfamily G member 7 protein-coding chr14-4669 chr14 55446423 55446633 + 6.01 0.000 Intergenic Intergenic -5983 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr4-3646 chr4 20795554 20795764 + 6.01 0.000 intron (NM_025221, intron 2 of 7) intron (NM_025221, intron 2 of 7) 55009 NM_147181 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr2-9768 chr2 102327681 102327891 + 6.01 0.000 intron (NM_001282408, intron 1 of 6) L1PA4|LINE|L1 -9471 NR_104167 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding chr11-8146 chr11 58109531 58109741 + 6.01 0.000 intron (NM_001005212, intron 2 of 2) intron (NM_001005212, intron 2 of 2) 9808 NM_001005211 219954 Hs.632122 NM_001005211 ENSG00000172377 OR9I1 OR11-228 olfactory receptor family 9 subfamily I member 1 protein-coding chr7-9732 chr7 157331188 157331398 + 6.01 0.000 Intergenic AluSz|SINE|Alu -5711 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr9-3206 chr9 133545195 133545405 + 6.01 0.000 intron (NM_001145320, intron 8 of 18) intron (NM_001145320, intron 8 of 18) 10596 NM_014694 9719 Hs.522543 NM_014694 ENSG00000197859 ADAMTSL2 ADAMTSL-2|GPHYSD1 ADAMTS like 2 protein-coding chr12-6714 chr12 5058628 5058838 + 6.01 0.000 Intergenic L2a|LINE|L2 14854 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr1-16523 chr1 231211152 231211362 + 6.01 0.000 intron (NM_001300889, intron 10 of 11) intron (NM_001300889, intron 10 of 11) -23630 NM_001256615 149373 Hs.632505 NM_001256615 ENSG00000235710 LOC149373 - uncharacterized LOC149373 protein-coding chr4-7115 chr4 35390689 35390899 + 6.01 0.000 Intergenic AluSx1|SINE|Alu 853145 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr3-4617 chr3 10808995 10809205 + 6.01 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -7128 NM_014229 6538 Hs.655078 NM_014229 ENSG00000132164 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 member 11 protein-coding chr14-2718 chr14 90985840 90986050 + 6.01 0.000 intron (NM_182398, intron 2 of 12) Tigger13a|DNA|TcMar-Tigger 74179 NM_001322237 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr4-5058 chr4 143245617 143245827 + 6.01 0.000 Intergenic LTR8|LTR|ERV1 60805 NM_032557 84640 Hs.480848 NM_032557 ENSG00000170185 USP38 HP43.8KD ubiquitin specific peptidase 38 protein-coding chr22-2064 chr22 46655745 46655955 + 6.01 0.000 intron (NM_015124, intron 3 of 18) intron (NM_015124, intron 3 of 18) 35464 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr22-3338 chr22 22955952 22956162 + 6.01 0.000 Intergenic Intergenic 68241 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr15-4602 chr15 60523324 60523534 + 6.01 0.000 intron (NR_120339, intron 4 of 5) MER63C|DNA|hAT-Blackjack 44251 NR_120342 101928784 Hs.655155 NR_120339 ENSG00000245534 RORA-AS1 - RORA antisense RNA 1 ncRNA chr4-8504 chr4 161184154 161184364 + 6.01 0.000 Intergenic Intergenic -838474 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr22-4041 chr22 41489095 41489305 + 6.01 0.000 intron (NM_001098, intron 1 of 17) AluJo|SINE|Alu 20083 NM_001098 50 Hs.643610 NM_001098 ENSG00000100412 ACO2 ACONM|HEL-S-284|ICRD|OCA8|OPA9 aconitase 2 protein-coding chr13-2777 chr13 99721834 99722044 + 6.01 0.000 intron (NR_104592, intron 1 of 9) L1MEd|LINE|L1 7062 NR_120383 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr12-8082 chr12 117381858 117382068 + 6.01 0.000 Intergenic L2c|LINE|L2 -20161 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr1-11926 chr1 59678820 59679030 + 6.01 0.000 intron (NM_001350790, intron 15 of 16) intron (NM_001350790, intron 15 of 16) 54371 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr4-6817 chr4 7958525 7958735 + 6.01 0.000 Intergenic AluSx|SINE|Alu -18704 NM_198595 60312 Hs.529369 NM_021638 ENSG00000196526 AFAP1 AFAP|AFAP-110|AFAP110 actin filament associated protein 1 protein-coding chr1-6940 chr1 155185084 155185294 + 6.01 0.000 TTS (NM_001044392) TTS (NM_001044392) 7720 NM_001204294 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr4-5630 chr4 5282686 5282896 + 6.01 0.000 intron (NM_001306082, intron 4 of 12) MER44D|DNA|TcMar-Tigger 231311 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr1-15209 chr1 110451264 110451474 + 6.01 0.000 intron (NM_032414, intron 1 of 2) intron (NM_032414, intron 1 of 2) 220 NM_032414 84432 Hs.514793 NM_032414 ENSG00000143125 PROK1 EGVEGF|PK1|PRK1 prokineticin 1 protein-coding chr7-4153 chr7 94440388 94440598 + 6.01 0.000 Intergenic Intergenic 45932 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr20-3657 chr20 10462463 10462673 + 6.01 0.000 intron (NM_001009608, intron 2 of 7) HAL1|LINE|L1 27263 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr19-6901 chr19 45542314 45542524 + 6.01 0.000 intron (NM_001017989, intron 1 of 1) Tigger3a|DNA|TcMar-Tigger 34940 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr15-2789 chr15 34953861 34954071 + 6.01 0.000 intron (NM_014691, intron 3 of 34) AluSx|SINE|Alu 15776 NM_014691 9716 Hs.510958 NM_014691 ENSG00000021776 AQR IBP160|fSAP164 aquarius intron-binding spliceosomal factor protein-coding chr2-10565 chr2 240412287 240412497 + 6.01 0.000 Intergenic Intergenic -23271 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr18-3396 chr18 61216109 61216319 + 6.01 0.000 Intergenic Intergenic -117216 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr1-10894 chr1 207002797 207003007 + 6.01 0.000 Intergenic Intergenic 29854 NM_023938 79098 Hs.32417 NM_023938 ENSG00000182795 C1orf116 SARG chromosome 1 open reading frame 116 protein-coding chr11-10504 chr11 118939624 118939834 + 6.01 0.000 Intergenic Intergenic -16569 NM_006760 7379 Hs.379613 NM_006760 ENSG00000110375 UPK2 UP2|UPII uroplakin 2 protein-coding chr1-13746 chr1 16069510 16069720 + 6.01 0.000 intron (NM_182623, intron 1 of 6) intron (NM_182623, intron 1 of 6) 4036 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr1-13096 chr1 182687236 182687446 + 6.01 0.000 Intergenic MER5A|DNA|hAT-Charlie -14409 NM_001102450 85397 Hs.20982 NM_033345 ENSG00000135824 RGS8 - regulator of G protein signaling 8 protein-coding chr11-10453 chr11 117433830 117434040 + 6.01 0.000 intron (NM_020693, intron 27 of 32) intron (NM_020693, intron 27 of 32) 106081 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr9-5221 chr9 75974002 75974212 + 6.01 0.000 intron (NR_120409, intron 2 of 19) intron (NR_120409, intron 2 of 19) 83434 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr1-9707 chr1 52095771 52095981 + 6.01 0.000 Intergenic AluSz6|SINE|Alu 39581 NM_152265 91408 Hs.429839 NM_152265 ENSG00000134717 BTF3L4 - basic transcription factor 3 like 4 protein-coding chr1-14671 chr1 60663148 60663358 + 6.01 0.000 intron (NR_110628, intron 4 of 5) intron (NR_110628, intron 4 of 5) -40568 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr7-8338 chr7 42914624 42914834 + 6.01 0.000 Intergenic HAL1|LINE|L1 -2639 NM_001099858 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr12-6835 chr12 13722743 13722953 + 6.01 0.000 intron (NM_000834, intron 3 of 12) intron (NM_000834, intron 3 of 12) 257508 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr6-6685 chr6 167356031 167356241 + 6.01 0.000 Intergenic Intergenic 28374 NR_163193 6953 Hs.351 NM_004610 ENSG00000203690 TCP10 TCP10A t-complex 10 pseudo chr1-11998 chr1 92205076 92205286 + 6.01 0.000 Intergenic Intergenic -12734 NM_001012425 388649 Hs.558823 NM_001012425 ENSG00000203910 C1orf146 - chromosome 1 open reading frame 146 protein-coding chr6-7094 chr6 34137187 34137397 + 6.01 0.000 intron (NM_000841, intron 1 of 10) intron (NM_000841, intron 1 of 10) 8795 NM_001282847 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chrX-5300 chrX 142738241 142738451 + 6.01 0.000 Intergenic LTR16A|LTR|ERVL -287582 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr10-5508 chr10 82490214 82490424 + 6.01 0.000 intron (NR_163253, intron 3 of 10) L2a|LINE|L2 -257399 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr1-14236 chr1 36367975 36368185 + 6.01 0.000 5' UTR (NM_032017, exon 2 of 12) 5' UTR (NM_032017, exon 2 of 12) 17844 NM_032017 83931 Hs.471768 NM_032017 ENSG00000196182 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding chr6-6011 chr6 108423183 108423393 + 6.01 0.000 intron (NM_145315, intron 7 of 12) intron (NM_145315, intron 7 of 12) 128234 NR_136553 246269 Hs.259666 NM_145315 ENSG00000135537 AFG1L AFG1|LACE1|c222389 AFG1 like ATPase protein-coding chr6-5255 chr6 137059245 137059455 + 6.01 0.000 Intergenic Intergenic -14170 NM_001278723 53832 Hs.445868 NM_014432 ENSG00000016402 IL20RA CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA interleukin 20 receptor subunit alpha protein-coding chr2-13159 chr2 119660948 119661158 + 6.01 0.000 Intergenic MIRc|SINE|MIR -18114 NM_001105198 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr13-4440 chr13 111857810 111858020 + 6.01 0.000 Intergenic Intergenic -35463 NR_046992 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr6-6150 chr6 797561 797771 + 6.01 0.000 Intergenic Intergenic -70832 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr2-6473 chr2 168061152 168061362 + 6.01 0.000 intron (NM_013233, intron 14 of 17) L3|LINE|CR1 -120113 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr19-4154 chr19 35949415 35949625 + 6.01 0.000 intron (NR_136525, intron 1 of 4) intron (NR_136525, intron 1 of 4) 2405 NR_136525 105372383 Hs.641592 NR_136525 LOC105372383 - uncharacterized LOC105372383 ncRNA chr8-7037 chr8 112415639 112415849 + 6.01 0.000 intron (NM_052900, intron 31 of 68) THE1D-int|LTR|ERVL-MaLR -227749 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr2-4745 chr2 9459492 9459702 + 6.01 0.000 exon (NM_001321834, exon 15 of 18) exon (NM_001321834, exon 15 of 18) -14954 NM_001320859 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr4-7029 chr4 26142111 26142321 + 6.01 0.000 Intergenic Intergenic -177494 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr4-5308 chr4 179219825 179220035 + 6.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR -1311994 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr4-5447 chr4 25507640 25507850 + 6.01 0.000 Intergenic LTR67B|LTR|ERVL 61601 NR_134641 101929161 Hs.125638 NR_134641 LOC101929161 - uncharacterized LOC101929161 ncRNA chr3-7743 chr3 57376969 57377179 + 6.01 0.000 exon (NM_001366028, exon 53 of 74) exon (NM_001366028, exon 53 of 74) -84389 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chr15-2984 chr15 52268630 52268840 + 6.01 0.000 intron (NM_018728, intron 8 of 40) Charlie19a|DNA|hAT-Charlie 8465 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr8-6705 chr8 84630405 84630615 + 6.01 0.000 intron (NM_001354308, intron 3 of 9) intron (NM_001354308, intron 3 of 9) -75417 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr2-12034 chr2 29393282 29393492 + 6.01 0.000 intron (NM_004304, intron 4 of 28) MER39|LTR|ERV1 81990 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr9-4174 chr9 20557935 20558145 + 6.01 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) -55698 NR_039685 100616441 NR_039685 ENSG00000264941 MIR4474 - microRNA 4474 ncRNA chr20-3394 chr20 37912201 37912411 + 6.01 0.000 intron (NM_080607, intron 1 of 3) Charlie4z|DNA|hAT-Charlie 9179 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr1-12481 chr1 18965860 18966070 + 6.01 0.000 Intergenic Intergenic -9289 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr11-5072 chr11 112450404 112450614 + 6.01 0.000 Intergenic HAL1|LINE|L1 -31723 NR_120559 101928823 Hs.126118 NR_120559 ENSG00000254968 LINC02763 - long intergenic non-protein coding RNA 2763 ncRNA chr9-5794 chr9 128627720 128627930 + 6.01 0.000 intron (NM_003127, intron 49 of 55) (TTCT)n|Simple_repeat|Simple_repeat 29025 NM_052844 89891 Hs.495240 NM_052844 ENSG00000119333 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding chr10-7477 chr10 10407704 10407914 + 6.01 0.000 Intergenic Intergenic 54540 NR_120637 101928322 Hs.576789 NR_120637 ENSG00000270111 CELF2-DT - CELF2 divergent transript ncRNA chr7-6940 chr7 91166218 91166428 + 6.01 0.000 intron (NM_012395, intron 13 of 13) intron (NM_012395, intron 13 of 13) -98110 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr14-4199 chr14 90815455 90815665 + 6.01 0.000 intron (NM_001320421, intron 1 of 20) intron (NM_001320421, intron 1 of 20) 857 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr16-5240 chr16 30978269 30978479 + 6.01 0.000 intron (NM_014712, intron 13 of 18) intron (NM_014712, intron 13 of 18) -6833 NM_001142777 80270 Hs.460618 NM_025193 ENSG00000099377 HSD3B7 CBAS1|PFIC4|SDR11E3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding chr7-4069 chr7 6430360 6430570 + 6.01 0.000 intron (NM_001142936, intron 4 of 12) intron (NM_001142936, intron 4 of 12) 17489 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr19-6539 chr19 18839633 18839843 + 6.01 0.000 intron (NM_002911, intron 1 of 23) intron (NM_002911, intron 1 of 23) 7779 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr2-6982 chr2 134193066 134193276 + 6.01 0.000 intron (NM_001371457, intron 1 of 16) AluJo|SINE|Alu -60901 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr16-5867 chr16 1666775 1666985 + 6.01 0.000 intron (NM_020825, intron 15 of 19) intron (NM_020825, intron 15 of 19) -11399 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 JPT2 C16orf34|HN1L|L11 Jupiter microtubule associated homolog 2 protein-coding chr20-3131 chr20 35026360 35026570 + 6.01 0.000 intron (NM_015638, intron 8 of 18) AluJr|SINE|Alu -35993 NR_039912 100616134 NR_039912 ENSG00000283441 MIR499B MIR499A|hsa-mir-499b microRNA 499b ncRNA chr11-4064 chr11 17763387 17763597 + 6.01 0.000 intron (NM_001112741, intron 1 of 3) (AC)n|Simple_repeat|Simple_repeat 27544 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr21-1278 chr21 31505202 31505412 + 6.01 0.000 intron (NM_003253, intron 1 of 28) intron (NM_003253, intron 1 of 28) 53780 NM_001353688 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr15-4420 chr15 44676510 44676720 + 6.01 0.000 intron (NM_001145112, intron 1 of 15) intron (NM_001145112, intron 1 of 15) 273 NM_001330283 197135 Hs.11594 NM_001145112 ENSG00000229474 PATL2 OOMD4|Pat1a|hPat1a PAT1 homolog 2 protein-coding chr22-3858 chr22 32997061 32997271 + 6.01 0.000 intron (NM_003490, intron 2 of 13) intron (NM_003490, intron 2 of 13) 9655 NM_133633 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr11-7244 chr11 10392827 10393037 + 6.01 0.000 intron (NR_103765, intron 2 of 3) intron (NR_103765, intron 2 of 3) -57389 NM_001172431 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr5-4140 chr5 88438164 88438374 + 6.01 0.000 intron (NR_105021, intron 1 of 5) intron (NR_105021, intron 1 of 5) 821 NR_105021 102546226 Hs.535810 NR_105021 ENSG00000250156 LINC02060 - long intergenic non-protein coding RNA 2060 ncRNA chr22-2222 chr22 21594974 21595184 + 6.01 0.000 intron (NM_001256355, intron 2 of 3) intron (NM_001256355, intron 2 of 3) 27365 NR_028436 7332 Hs.108104 NM_003347 ENSG00000185651 UBE2L3 E2-F1|L-UBC|UBCH7|UbcM4 ubiquitin conjugating enzyme E2 L3 protein-coding chr8-7088 chr8 118012330 118012540 + 6.01 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -91522 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr14-4480 chr14 36039679 36039889 + 6.01 0.000 Intergenic L1MC5|LINE|L1 -30643 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chr6-6793 chr6 4677534 4677744 + 6.01 0.000 Intergenic Intergenic -28499 NM_001368125 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr19-6786 chr19 41184633 41184843 + 6.01 0.000 Intergenic AluJb|SINE|Alu -8481 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr9-5626 chr9 119274030 119274240 + 6.01 0.000 intron (NM_014618, intron 2 of 7) intron (NM_014618, intron 2 of 7) 95300 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr12-7744 chr12 93857346 93857556 + 6.01 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) 86155 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr6-7383 chr6 50030835 50031045 + 6.01 0.000 Intergenic L1PA16|LINE|L1 -8946 NM_001037497 245913 Hs.571093 NM_001037497 ENSG00000203970 DEFB110 DEFB-10|DEFB-11|DEFB111 defensin beta 110 protein-coding chr5-7153 chr5 2969950 2970160 + 6.01 0.000 Intergenic L1MB1|LINE|L1 52201 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA chr4-6954 chr4 19069284 19069494 + 6.01 0.000 Intergenic L2a|LINE|L2 -1047514 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr3-10372 chr3 128670199 128670409 + 6.01 0.000 Intergenic AluYm1|SINE|Alu -19486 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chr10-7486 chr10 11297605 11297815 + 6.01 0.000 intron (NM_001025076, intron 9 of 13) AluSx|SINE|Alu 46964 NR_126062 414196 Hs.729598 NM_001012713 CELF2-AS1 C10orf31 CELF2 antisense RNA 1 ncRNA chrX-3487 chrX 38055189 38055399 + 6.01 0.000 intron (NM_001163334, intron 2 of 16) intron (NM_001163334, intron 2 of 16) 21760 NM_001163334 94122 Hs.662334 NM_138780 ENSG00000147041 SYTL5 slp5 synaptotagmin like 5 protein-coding chr4-4188 chr4 10928191 10928401 + 6.01 0.000 Intergenic L2c|LINE|L2 -243528 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr15-4708 chr15 66862067 66862277 + 6.01 0.000 Intergenic Intergenic 94343 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr12-7913 chr12 108361410 108361620 + 6.01 0.000 Intergenic Intergenic -22204 NM_004072 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr7-4150 chr7 80877039 80877249 + 6.01 0.000 intron (NM_006379, intron 2 of 17) intron (NM_006379, intron 2 of 17) 41907 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr20-4095 chr20 40742290 40742500 + 6.01 0.000 Intergenic Intergenic -27772 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr18-1528 chr18 10424654 10424864 + 6.01 0.000 Intergenic (GGAG)n|Simple_repeat|Simple_repeat -10389 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr4-6382 chr4 110701173 110701383 + 6.01 0.000 Intergenic L1MCc|LINE|L1 -59155 NM_001204397 5308 Hs.643588 NM_000325 ENSG00000164093 PITX2 ARP1|ASGD4|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS paired like homeodomain 2 protein-coding chr19-6291 chr19 8255422 8255632 + 6.01 0.000 intron (NM_024552, intron 4 of 11) intron (NM_024552, intron 4 of 11) 46157 NM_024552 79603 Hs.515111 NM_024552 ENSG00000090661 CERS4 LASS4|Trh1 ceramide synthase 4 protein-coding chr11-6938 chr11 111148995 111149205 + 6.01 0.000 Intergenic Intergenic -51782 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr20-4165 chr20 44460785 44460995 + 6.01 0.000 TTS (NR_132342) TTS (NR_132342) 4454 NR_132343 140834 Hs.357589 NM_001287807 ENSG00000168746 LINC01620 C20orf62|dJ1013A22.3 long intergenic non-protein coding RNA 1620 ncRNA chr17-5618 chr17 49035662 49035872 + 6.01 0.000 intron (NM_001160423, intron 5 of 12) intron (NM_001160423, intron 5 of 12) 38382 NM_001160423 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chr1-11602 chr1 221572300 221572510 + 6.01 0.000 Intergenic Intergenic 164495 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chrX-5264 chrX 138936577 138936787 + 6.01 0.000 intron (NM_001139500, intron 2 of 6) L2a|LINE|L2 -69127 NM_001139502 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr5-5869 chr5 3225683 3225893 + 6.01 0.000 Intergenic Intergenic 47953 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr2-11965 chr2 26851486 26851696 + 6.01 0.000 intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 3167 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr3-5257 chr3 109142130 109142340 + 6.01 0.000 intron (NR_161294, intron 2 of 2) intron (NR_161294, intron 2 of 2) 5516 NM_001351622 401081 Hs.280892 NM_001351622 ENSG00000241224 C3orf85 - chromosome 3 open reading frame 85 protein-coding chr4-3761 chr4 88039510 88039720 + 6.01 0.000 intron (NR_156488, intron 4 of 13) AluSz|SINE|Alu 31980 NM_000297 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr13-1375 chr13 98682442 98682652 + 6.01 0.000 Intergenic Intergenic 70125 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr2-8283 chr2 101996481 101996691 + 6.01 0.000 intron (NM_004633, intron 1 of 8) intron (NM_004633, intron 1 of 8) -2375 NR_048564 7850 Hs.25333 NM_004633 ENSG00000115590 IL1R2 CD121b|CDw121b|IL-1R-2|IL-1RT-2|IL-1RT2|IL1R2c|IL1RB interleukin 1 receptor type 2 protein-coding chr1-14341 chr1 40614706 40614916 + 6.01 0.000 Intergenic L1MA9|LINE|L1 50871 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr8-6429 chr8 59284698 59284908 + 6.01 0.000 Intergenic Intergenic 165593 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chrX-3363 chrX 142108563 142108773 + 6.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 96622 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr14-3985 chr14 34019095 34019305 + 6.01 0.000 Intergenic Intergenic -68126 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr1-14630 chr1 56461226 56461436 + 6.01 0.000 Intergenic Intergenic 46368 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr12-5228 chr12 108056153 108056363 + 6.01 0.000 Intergenic LTR16C|LTR|ERVL -73030 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr3-9498 chr3 50752265 50752475 + 6.01 0.000 intron (NM_004947, intron 1 of 52) AluSc|SINE|Alu 77290 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr22-2873 chr22 45526670 45526880 + 6.01 0.000 intron (NM_006487, intron 3 of 14) intron (NM_006487, intron 3 of 14) 23892 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chrX-3484 chrX 37685860 37686070 + 6.01 0.000 exon (NM_021083, exon 1 of 3) exon (NM_021083, exon 1 of 3) 174 NM_021083 7504 Hs.78919 NM_021083 ENSG00000047597 XK KX|NA|NAC|X1k|XKR1 X-linked Kx blood group protein-coding chr3-11154 chr3 189297425 189297635 + 6.01 0.000 intron (NM_198485, intron 4 of 5) MER5A1|DNA|hAT-Charlie -56936 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr20-3559 chr20 2907715 2907925 + 6.01 0.000 intron (NM_080840, intron 1 of 22) Cheshire|DNA|hAT-Charlie -15387 NM_080841 5786 Hs.269577 NM_002836 ENSG00000132670 PTPRA HEPTP|HLPR|HPTPA|HPTPalpha|LRP|PTPA|PTPRL2|R-PTP-alpha|RPTPA protein tyrosine phosphatase receptor type A protein-coding chr16-5054 chr16 66977588 66977798 + 6.01 0.000 Intergenic Intergenic 10218 NM_001185176 23491 Hs.268700 NM_012122 ENSG00000172828 CES3 ES31 carboxylesterase 3 protein-coding chr5-7144 chr5 2371885 2372095 + 6.01 0.000 Intergenic Intergenic -59789 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chrX-3056 chrX 105409797 105410007 + 6.01 0.000 intron (NM_017416, intron 5 of 10) intron (NM_017416, intron 5 of 10) -189209 NM_031274 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chrX-4992 chrX 117767886 117768096 + 6.01 0.000 Intergenic Intergenic 205747 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr9-4728 chr9 128569580 128569790 + 6.01 0.000 intron (NM_003127, intron 3 of 55) intron (NM_003127, intron 3 of 55) 17098 NM_001363759 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr1-13347 chr1 248702828 248703038 + 6.01 0.000 Intergenic Intergenic 5871 NR_125950 101928226 NR_125950 LYPD9P - LY6/PLAUR domain containing 9, pseudogene pseudo chr17-6709 chr17 79647783 79647993 + 6.01 0.000 Intergenic Intergenic -36837 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr22-3684 chr22 24033918 24034128 + 6.01 0.000 intron (NM_001199281, intron 1 of 36) MER1B|DNA|hAT-Charlie 22653 NM_001199281 23523 Hs.517478 NM_012295 ENSG00000099991 CABIN1 CAIN|KB-318B8.7|PPP3IN calcineurin binding protein 1 protein-coding chr21-923 chr21 35649228 35649438 + 6.01 0.000 Intergenic Intergenic -68569 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr8-3600 chr8 140924554 140924764 + 6.01 0.000 intron (NM_001352697, intron 3 of 35) L2b|LINE|L2 76345 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr11-9398 chr11 57461864 57462074 + 6.01 0.000 intron (NM_178570, intron 1 of 2) intron (NM_178570, intron 1 of 2) 1441 NM_178570 349667 Hs.502618 NM_178570 ENSG00000186907 RTN4RL2 NGRH1|NgR2 reticulon 4 receptor like 2 protein-coding chr14-4932 chr14 74154270 74154480 + 6.01 0.000 intron (NM_001024674, intron 5 of 5) intron (NM_001024674, intron 5 of 5) 69422 NM_001024674 91750 Hs.612866 NM_001024674 ENSG00000205659 LIN52 C14orf46|c14_5549 lin-52 DREAM MuvB core complex component protein-coding chr12-5853 chr12 48754617 48754827 + 6.01 0.000 intron (NM_001351125, intron 2 of 4) AluY|SINE|Alu 17315 NR_039850 100616262 NR_039850 ENSG00000264201 MIR4701 - microRNA 4701 ncRNA chr13-3320 chr13 59350134 59350344 + 6.01 0.000 Intergenic MER5A1|DNA|hAT-Charlie -662479 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr3-10877 chr3 169529814 169530024 + 6.01 0.000 intron (NM_001366473, intron 1 of 15) L2c|LINE|L2 82052 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr12-5648 chr12 75656733 75656943 + 6.01 0.000 Intergenic Intergenic -145229 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr8-6394 chr8 55506312 55506522 + 6.01 0.000 intron (NM_052898, intron 2 of 2) intron (NM_052898, intron 2 of 2) 14561 NR_134323 105375843 Hs.662416 NR_134323 ENSG00000254357 LOC105375843 - uncharacterized LOC105375843 ncRNA chr9-4219 chr9 70620137 70620347 + 6.01 0.000 exon (NM_024971, exon 16 of 26) exon (NM_024971, exon 16 of 26) 189842 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr21-965 chr21 45149028 45149238 + 6.01 0.000 intron (NR_027673, intron 3 of 12) intron (NR_027673, intron 3 of 12) -3397 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr11-6185 chr11 45317583 45317793 + 6.01 0.000 Intergenic Intergenic -31347 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr8-4878 chr8 67176997 67177207 + 6.01 0.000 intron (NM_001363133, intron 23 of 27) intron (NM_001363133, intron 23 of 27) 93254 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr12-7850 chr12 103755908 103756118 + 6.01 0.000 intron (NM_017564, intron 63 of 68) MIR|SINE|MIR 85221 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr10-7650 chr10 25616807 25617017 + 6.01 0.000 Intergenic Intergenic -34800 NR_108068 101929052 Hs.128298 NR_108067 ENSG00000280809 LINC00836 - long intergenic non-protein coding RNA 836 ncRNA chr7-3529 chr7 6618828 6619038 + 6.01 0.000 intron (NM_001353546, intron 2 of 2) Tigger19a|DNA|TcMar-Tigger 3323 NM_001353546 54753 Hs.592170 NM_017560 ENSG00000236609 ZNF853 - zinc finger protein 853 protein-coding chr17-4030 chr17 76412201 76412411 + 6.01 0.000 intron (NM_022066, intron 1 of 17) intron (NM_022066, intron 1 of 17) 27028 NM_001142602 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr16-4238 chr16 19687100 19687310 + 6.01 0.000 intron (NM_001300743, intron 25 of 27) intron (NM_001300743, intron 25 of 27) -29251 NM_001305122 124152 Hs.460217 NM_153208 ENSG00000174628 IQCK - IQ motif containing K protein-coding chr15-1593 chr15 77048233 77048443 + 6.01 0.000 intron (NM_198902, intron 5 of 5) intron (NM_198902, intron 5 of 5) 22771 NM_198902 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr6-7236 chr6 41291177 41291387 + 6.01 0.000 Intergenic MER41-int|LTR|ERV1 -4537 NR_136332 54210 Hs.283022 NM_018643 ENSG00000124731 TREM1 CD354|TREM-1 triggering receptor expressed on myeloid cells 1 protein-coding chr17-6660 chr17 74298071 74298281 + 6.01 0.000 intron (NM_023036, intron 6 of 13) intron (NM_023036, intron 6 of 13) 23942 NR_148379 64446 Hs.147472 NM_023036 ENSG00000171595 DNAI2 CILD9|DIC2 dynein axonemal intermediate chain 2 protein-coding chr7-9435 chr7 133992655 133992865 + 6.01 0.000 intron (NM_021807, intron 14 of 17) L1MA4|LINE|L1 -134580 NM_001365700 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr11-10113 chr11 87443902 87444112 + 6.01 0.000 Intergenic Intergenic 275404 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr10-7201 chr10 112367739 112367949 + 6.01 0.000 Intergenic Intergenic -6272 NM_203379 51703 Hs.11638 NM_016234 ENSG00000197142 ACSL5 ACS2|ACS5|FACL5 acyl-CoA synthetase long chain family member 5 protein-coding chr7-9492 chr7 136948551 136948761 + 6.01 0.000 intron (NR_046103, intron 2 of 3) intron (NR_046103, intron 2 of 3) 45489 NR_030165 574443 NR_030165 ENSG00000207597 MIR490 MIRN490|hsa-mir-490|miR-490 microRNA 490 ncRNA chr22-1485 chr22 29883190 29883400 + 6.01 0.000 5' UTR (NM_153050, exon 1 of 20) 5' UTR (NM_153050, exon 1 of 20) 121 NM_153051 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding chr12-4906 chr12 67026808 67027018 + 6.01 0.000 Intergenic Intergenic 69371 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr9-6974 chr9 107488638 107488848 + 6.01 0.000 intron (NM_001314052, intron 2 of 3) CpG 1026 NM_001314052 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr16-5848 chr16 1064755 1064965 + 6.01 0.000 non-coding (NR_027242, exon 4 of 4) non-coding (NR_027242, exon 4 of 4) -7896 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr22-3076 chr22 41956988 41957198 + 6.01 0.000 intron (NR_024355, intron 1 of 1) intron (NR_024355, intron 1 of 1) 4906 NR_024355 339674 Hs.517656 NR_024355 ENSG00000205704 LINC00634 BK250D10.8 long intergenic non-protein coding RNA 634 ncRNA chr18-1787 chr18 11649976 11650186 + 6.01 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 4860 NR_106975 102465690 NR_106975 ENSG00000283492 MIR7153 hsa-mir-7153|mir-7153 microRNA 7153 ncRNA chr20-4097 chr20 40769051 40769261 + 6.01 0.000 Intergenic MER5A|DNA|hAT-Charlie -54533 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr10-7058 chr10 85790885 85791095 + 6.01 0.000 intron (NM_017551, intron 8 of 15) intron (NM_017551, intron 8 of 15) 213259 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chrX-5035 chrX 121446138 121446348 + 6.01 0.000 Intergenic Intergenic 75271 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr16-6715 chr16 72109336 72109546 + 6.01 0.000 exon (NM_014003, exon 25 of 27) exon (NM_014003, exon 25 of 27) -15063 NM_001142318 54957 Hs.134406 NM_017853 ENSG00000140830 TXNL4B DLP|Dim2 thioredoxin like 4B protein-coding chr3-10490 chr3 135505828 135506038 + 6.01 0.000 Intergenic L2c|LINE|L2 -459795 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr7-4412 chr7 101027702 101027912 + 6.01 0.000 intron (NM_001040105, intron 1 of 12) AluJb|SINE|Alu 7726 NM_001040105 140453 Hs.271819 NM_001004430 ENSG00000169876 MUC17 MUC-17|MUC-3|MUC3 mucin 17, cell surface associated protein-coding chr1-15803 chr1 177235843 177236053 + 6.01 0.000 intron (NM_021165, intron 2 of 7) intron (NM_021165, intron 2 of 7) 64990 NM_021165 57795 Hs.495918 NM_021165 ENSG00000198797 BRINP2 DBCCR1L2|FAM5B BMP/retinoic acid inducible neural specific 2 protein-coding chr9-7735 chr9 74605359 74605569 + 6.01 0.000 intron (NM_006914, intron 1 of 9) intron (NM_006914, intron 1 of 9) -10070 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr4-6140 chr4 28487887 28488097 + 6.01 0.000 Intergenic Intergenic -331590 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr12-6097 chr12 123767555 123767765 + 6.01 0.000 exon (NM_207437, exon 2 of 78) exon (NM_207437, exon 2 of 78) 5165 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr4-8698 chr4 181646874 181647084 + 6.01 0.000 Intergenic Intergenic 182994 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr1-13575 chr1 8193296 8193506 + 6.01 0.000 Intergenic Intergenic -15271 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr9-7879 chr9 87662015 87662225 + 6.01 0.000 intron (NM_004938, intron 18 of 25) L1PB4|LINE|L1 -63999 NM_001912 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr11-8962 chr11 20187269 20187479 + 6.01 0.000 Intergenic L2c|LINE|L2 -26899 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr2-13897 chr2 181079162 181079372 + 6.01 0.000 Intergenic Intergenic -44570 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA chr2-7314 chr2 240480989 240481199 + 6.01 0.000 exon (NM_001354025, exon 16 of 17) exon (NM_001354025, exon 16 of 17) -24394 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr14-5339 chr14 102872040 102872250 + 6.01 0.000 intron (NM_145725, intron 4 of 11) MIR|SINE|MIR -50511 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr1-11930 chr1 61491508 61491718 + 6.01 0.000 Intergenic ERVL-E-int|LTR|ERVL -162629 NR_073400 414927 Hs.123471 NR_073400 MGC34796 - sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene pseudo chr5-3392 chr5 142143947 142144157 + 6.01 0.000 intron (NM_030571, intron 6 of 7) intron (NM_030571, intron 6 of 7) 35273 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr4-4995 chr4 136910643 136910853 + 6.01 0.000 intron (NR_149105, intron 3 of 3) L1MA6|LINE|L1 -283008 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr19-4889 chr19 40740111 40740321 + 6.01 0.000 TTS (NM_001353809) TTS (NM_001353809) 10261 NM_001353806 284325 Hs.585105 NM_198476 ENSG00000188493 C19orf54 - chromosome 19 open reading frame 54 protein-coding chr7-4753 chr7 72871330 72871540 + 6.01 0.000 Intergenic Intergenic -2344 NR_003666 441251 Hs.591819 NM_001034844 ENSG00000179994 SPDYE7P - speedy/RINGO cell cycle regulator family member E7, pseudogene pseudo chr19-5788 chr19 33079508 33079718 + 6.01 0.000 Intergenic AluY|SINE|Alu -1267 NR_135270 55094 Hs.466436 NM_018025 ENSG00000076650 GPATCH1 ECGP|GPATC1 G-patch domain containing 1 protein-coding chr15-4022 chr15 59637845 59638055 + 6.01 0.000 TTS (NM_001320929) TTS (NM_001320929) 19355 NM_001320929 2958 Hs.512934 NM_004492 ENSG00000140307 GTF2A2 HsT18745|T18745|TF2A2|TFIIA|TFIIA-12|TFIIA-gamma|TFIIAS general transcription factor IIA subunit 2 protein-coding chr10-8431 chr10 85854839 85855049 + 6.01 0.000 intron (NM_017551, intron 7 of 15) L2a|LINE|L2 277213 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr12-4852 chr12 58833773 58833983 + 6.01 0.000 Intergenic Intergenic -52162 NR_120452 101927653 Hs.130744 NR_120452 ENSG00000257259 LINC02388 - long intergenic non-protein coding RNA 2388 ncRNA chr19-5646 chr19 5443212 5443422 + 6.01 0.000 Intergenic AluSz6|SINE|Alu -12100 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr11-7812 chr11 106137099 106137309 + 6.01 0.000 Intergenic Intergenic -5088 NR_135099 105369473 Hs.524010 NR_135099 ENSG00000254580 LINC02719 - long intergenic non-protein coding RNA 2719 ncRNA chr7-5181 chr7 8040048 8040258 + 6.01 0.000 intron (NM_138426, intron 3 of 7) L1ME1|LINE|L1 71357 NM_138426 113263 Hs.131673 NM_138426 ENSG00000106415 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced 1 protein-coding chr15-4649 chr15 64182988 64183198 + 6.01 0.000 intron (NM_001329607, intron 10 of 11) Penelope1_Vert|LINE|Penelope -19938 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding chr2-8997 chr2 194028995 194029205 + 6.01 0.000 Intergenic L1PB1|LINE|L1 -315169 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr4-3664 chr4 29164170 29164380 + 6.01 0.000 Intergenic MLT1E|LTR|ERVL-MaLR -50017 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr4-7796 chr4 97832487 97832697 + 6.01 0.000 intron (NM_174952, intron 9 of 10) L1PA7|LINE|L1 310884 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr4-5485 chr4 73776201 73776411 + 6.01 0.000 Intergenic Intergenic 35737 NM_000584 3576 Hs.624 NM_000584 ENSG00000169429 CXCL8 GCP-1|GCP1|IL8|LECT|LUCT|LYNAP|MDNCF|MONAP|NAF|NAP-1|NAP1 C-X-C motif chemokine ligand 8 protein-coding chr15-5018 chr15 81979998 81980208 + 6.01 0.000 Intergenic L1MC3|LINE|L1 65915 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr1-14437 chr1 45723428 45723638 + 6.01 0.000 intron (NM_001145349, intron 5 of 9) intron (NM_001145349, intron 5 of 9) 27120 NM_005897 3652 Hs.744252 NM_005897 ENSG00000197429 IPP KLHL27 intracisternal A particle-promoted polypeptide protein-coding chr2-13458 chr2 145880905 145881115 + 6.01 0.000 Intergenic LTR12C|LTR|ERV1 -706047 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr5-5111 chr5 101167033 101167243 + 6.01 0.000 Intergenic L1PA6|LINE|L1 -263856 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr2-9955 chr2 2226525 2226735 + 6.01 0.000 intron (NM_015025, intron 2 of 24) intron (NM_015025, intron 2 of 24) -92602 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr5-8854 chr5 152474950 152475160 + 6.01 0.000 Intergenic Intergenic -69776 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr3-10464 chr3 133839835 133840045 + 6.01 0.000 intron (NM_001363953, intron 5 of 8) intron (NM_001363953, intron 5 of 8) 34125 NR_163491 58477 Hs.12152 NM_021203 ENSG00000144867 SRPRB APMCF1|SR-beta SRP receptor subunit beta protein-coding chr17-7738 chr17 33892616 33892826 + 6.01 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 264085 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr3-3333 chr3 1358399 1358609 + 6.01 0.000 intron (NM_001289080, intron 12 of 22) intron (NM_001289080, intron 12 of 22) 265480 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr12-6745 chr12 6586245 6586455 + 6.01 0.000 intron (NM_001273, intron 25 of 39) AluY|SINE|Alu -4741 NR_003012 677780 Hs.689692 NR_003012 ENSG00000251898 SCARNA11 ACA57 small Cajal body-specific RNA 11 ncRNA chr4-4688 chr4 86267917 86268127 + 6.01 0.000 intron (NM_001363657, intron 2 of 13) L2a|LINE|L2 86622 NM_001318067 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr17-7990 chr17 48952624 48952834 + 6.01 0.000 Intergenic AluJo|SINE|Alu -7887 NM_001317194 11267 Hs.127249 NM_007241 ENSG00000159210 SNF8 Dot3|EAP30|VPS22 SNF8 subunit of ESCRT-II protein-coding chr11-7393 chr11 82327360 82327570 + 6.01 0.000 intron (NR_120571, intron 3 of 7) AluSc|SINE|Alu 76448 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr4-5879 chr4 127904825 127905035 + 6.01 0.000 Intergenic L1PA7|LINE|L1 23686 NM_001190801 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding chr18-2297 chr18 78232692 78232902 + 6.01 0.000 Intergenic L1M4a2|LINE|L1 -239070 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chrX-2539 chrX 99170863 99171073 + 6.01 0.000 Intergenic Intergenic 1239305 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr5-5006 chr5 82593514 82593724 + 6.01 0.000 Intergenic Intergenic -246536 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr10-6278 chr10 89635010 89635220 + 6.01 0.000 intron (NM_148977, intron 1 of 6) intron (NM_148977, intron 1 of 6) 8801 NM_138316 53354 Hs.163555 NM_138316 ENSG00000152782 PANK1 PANK pantothenate kinase 1 protein-coding chr9-4658 chr9 116802034 116802244 + 6.01 0.000 intron (NM_014010, intron 12 of 21) AluY|SINE|Alu 114834 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr12-2996 chr12 121773262 121773472 + 6.01 0.000 intron (NM_001080825, intron 8 of 11) intron (NM_001080825, intron 8 of 11) 20321 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr3-9209 chr3 37414036 37414246 + 6.01 0.000 intron (NM_001302832, intron 2 of 4) AluJr|SINE|Alu 3003 NM_001302832 339883 Hs.475945 NM_178339 ENSG00000198590 C3orf35 APRG1 chromosome 3 open reading frame 35 protein-coding chr3-7080 chr3 178470376 178470586 + 6.01 0.000 Intergenic L1PA8|LINE|L1 51280 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr4-6383 chr4 110953195 110953405 + 6.01 0.000 Intergenic Intergenic -92653 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr5-2832 chr5 53532342 53532552 + 6.01 0.000 Intergenic AluSc|SINE|Alu -28192 NM_001318051 4724 Hs.528222 NM_002495 ENSG00000164258 NDUFS4 AQDQ|CI-18|CI-18 kDa|CI-AQDQ|MC1DN1 NADH:ubiquinone oxidoreductase subunit S4 protein-coding chr2-14616 chr2 234158905 234159115 + 6.01 0.000 Intergenic L2a|LINE|L2 108308 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr9-8374 chr9 117957430 117957640 + 6.01 0.000 Intergenic Intergenic 253132 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chrX-4581 chrX 71539853 71540063 + 6.01 0.000 intron (NM_181672, intron 3 of 21) intron (NM_181672, intron 3 of 21) 6854 NM_181672 8473 Hs.405410 NM_003605 ENSG00000147162 OGT HINCUT-1|HRNT1|MRX106|O-GLCNAC|OGT1 O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding chr9-7632 chr9 38516313 38516523 + 6.01 0.000 Intergenic Charlie1|DNA|hAT-Charlie 28954 NR_047651 100289137 Hs.644630 NR_047651 ENSG00000283486 FAM95C - family with sequence similarity 95 member C ncRNA chr8-5132 chr8 70749279 70749489 + 6.01 0.000 Intergenic MER52D|LTR|ERV1 80045 NM_001287259 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr8-6681 chr8 81028995 81029205 + 6.01 0.000 intron (NM_018440, intron 3 of 8) intron (NM_018440, intron 3 of 8) 82968 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr9-7979 chr9 92659361 92659571 + 6.01 0.000 intron (NM_022755, intron 1 of 12) intron (NM_022755, intron 1 of 12) 10665 NM_022755 64768 Hs.459896 NM_022755 ENSG00000127080 IPPK C9orf12|INSP5K2|IP5K|IPK1|bA476B13.1 inositol-pentakisphosphate 2-kinase protein-coding chrX-5026 chrX 119610417 119610627 + 6.01 0.000 Intergenic L1MC4|LINE|L1 -4639 NM_001173487 55922 Hs.437084 NM_017544 ENSG00000186416 NKRF ITBA4|NRF NFKB repressing factor protein-coding chr11-8021 chr11 14729954 14730164 + 6.01 0.000 intron (NM_000922, intron 1 of 15) MLT1N2|LTR|ERVL-MaLR 86255 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr16-3252 chr16 87615221 87615431 + 6.01 0.000 intron (NM_020655, intron 1 of 4) intron (NM_020655, intron 1 of 4) 12818 NM_001271605 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr1-15893 chr1 183555915 183556125 + 6.01 0.000 3' UTR (NM_000433, exon 15 of 15) 3' UTR (NM_000433, exon 15 of 15) 34584 NM_001190789 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr14-5358 chr14 103219025 103219235 + 6.01 0.000 Intergenic Intergenic -30102 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chrX-3807 chrX 140365505 140365715 + 6.01 0.000 Intergenic L1MA9|LINE|L1 139450 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chrX-3774 chrX 132258513 132258723 + 6.01 0.000 intron (NR_110410, intron 2 of 2) intron (NR_110410, intron 2 of 2) -39138 NR_073150 57826 Hs.119889 NM_021183 ENSG00000123728 RAP2C - RAP2C, member of RAS oncogene family protein-coding chr9-7638 chr9 40912565 40912775 + 6.01 0.000 Intergenic CER|Satellite|Satellite 16422 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr1-15964 chr1 191973677 191973887 + 6.01 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -184680 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr9-6875 chr9 84873875 84874085 + 6.01 0.000 3' UTR (NM_001369538, exon 13 of 13) 3' UTR (NM_001369538, exon 13 of 13) 168079 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr20-3145 chr20 37336767 37336977 + 6.01 0.000 Intergenic Intergenic -7813 NM_005417 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr2-9250 chr2 219286642 219286852 + 6.01 0.000 3' UTR (NM_006736, exon 9 of 9) 3' UTR (NM_006736, exon 9 of 9) 7381 NM_006736 3300 Hs.77768 NM_006736 ENSG00000135924 DNAJB2 CMT2T|DSMA5|HSJ-1|HSJ1|HSPF3 DnaJ heat shock protein family (Hsp40) member B2 protein-coding chrX-3643 chrX 98980092 98980302 + 6.01 0.000 Intergenic LTR1A1|LTR|ERV1 -1415662 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr19-2501 chr19 10027553 10027763 + 6.01 0.000 Intergenic Intergenic -10696 NR_049855 100847093 NR_049855 ENSG00000266204 MIR5589 - microRNA 5589 ncRNA chr2-8015 chr2 69224487 69224697 + 6.01 0.000 intron (NM_032208, intron 17 of 17) intron (NM_032208, intron 17 of 17) 120910 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr1-14978 chr1 89721432 89721642 + 6.01 0.000 Intergenic Intergenic 88417 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr11-8905 chr11 16182777 16182987 + 6.01 0.000 intron (NM_033326, intron 6 of 15) intron (NM_033326, intron 6 of 15) 173664 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr12-5793 chr12 14511056 14511266 + 6.01 0.000 intron (NM_024829, intron 8 of 10) intron (NM_024829, intron 8 of 10) -56571 NR_120465 101928290 Hs.131933 NR_120465 ENSG00000256751 PLBD1-AS1 - PLBD1 antisense RNA 1 ncRNA chr1-12143 chr1 174667730 174667940 + 6.01 0.000 intron (NM_001366446, intron 14 of 25) L2b|LINE|L2 -32704 NM_001366451 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr11-8132 chr11 47198494 47198704 + 6.01 0.000 Intergenic AluSq|SINE|Alu -12165 NM_016223 29763 Hs.334639 NM_016223 ENSG00000165912 PACSIN3 SDPIII protein kinase C and casein kinase substrate in neurons 3 protein-coding chr13-4080 chr13 77109016 77109226 + 6.01 0.000 intron (NM_015057, intron 55 of 82) intron (NM_015057, intron 55 of 82) 33607 NR_046716 100874212 Hs.569288 NR_046716 ENSG00000236051 MYCBP2-AS1 - MYCBP2 antisense RNA 1 ncRNA chrX-4455 chrX 56705083 56705293 + 6.01 0.000 Intergenic L1P3|LINE|L1 -24055 NM_001348129 550643 Hs.355559 NM_001348129 ENSG00000204272 NBDY LINC01420|NoBody negative regulator of P-body association protein-coding chr6-4225 chr6 5043581 5043791 + 6.01 0.000 TTS (NR_126016) TTS (NR_126016) 13714 NR_126018 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr14-2732 chr14 98420495 98420705 + 6.01 0.000 Intergenic Intergenic -291013 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr4-5584 chr4 174681792 174682002 + 6.01 0.000 intron (NM_006529, intron 6 of 9) intron (NM_006529, intron 6 of 9) 147350 NM_006529 8001 Hs.413099 NM_006529 ENSG00000145451 GLRA3 - glycine receptor alpha 3 protein-coding chr20-4153 chr20 44152902 44153112 + 6.01 0.000 intron (NM_020433, intron 2 of 5) MER113|DNA|hAT-Charlie 34181 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr10-6880 chr10 32672947 32673157 + 6.01 0.000 intron (NM_001321115, intron 22 of 43) L1M4c|LINE|L1 226912 NR_109826 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding chr21-1346 chr21 33047352 33047562 + 6.01 0.000 Intergenic Intergenic -10372 NR_104056 101930746 Hs.580934 NR_104056 ENSG00000232539 LINC00945 - long intergenic non-protein coding RNA 945 ncRNA chr15-3517 chr15 99580441 99580651 + 6.01 0.000 intron (NM_001352616, intron 1 of 10) intron (NM_001352616, intron 1 of 10) 14063 NM_001352616 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr1-9837 chr1 62892196 62892406 + 6.01 0.000 Intergenic Intergenic 108169 NM_032852 84938 Hs.7353 NM_032852 ENSG00000125703 ATG4C APG4-C|APG4C|AUTL1|AUTL3 autophagy related 4C cysteine peptidase protein-coding chr3-4587 chr3 184773196 184773406 + 6.01 0.000 promoter-TSS (NR_110043) promoter-TSS (NR_110043) -146 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LINC02069 - long intergenic non-protein coding RNA 2069 ncRNA chr8-6735 chr8 87661592 87661802 + 6.01 0.000 Intergenic MLT2B3|LTR|ERVL 212318 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr15-3875 chr15 92814246 92814456 + 6.01 0.000 Intergenic AluSg4|SINE|Alu 18867 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr1-15262 chr1 114083039 114083249 + 6.01 0.000 Intergenic Intergenic 69296 NM_205848 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr10-6276 chr10 86367707 86367917 + 6.01 0.000 Intergenic Intergenic -1017 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr18-2742 chr18 78454585 78454795 + 6.01 0.000 Intergenic Intergenic -460963 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr19-4145 chr19 30719152 30719362 + 6.01 0.000 Intergenic Intergenic 346873 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr10-5643 chr10 97068938 97069148 + 6.01 0.000 intron (NM_003061, intron 4 of 36) intron (NM_003061, intron 4 of 36) -33713 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr11-10741 chr11 133051639 133051849 + 6.01 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -107976 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr2-6325 chr2 72968377 72968587 + 6.01 0.000 exon (NM_001330405, exon 13 of 14) exon (NM_001330405, exon 13 of 14) 50963 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr4-5026 chr4 140367558 140367768 + 6.01 0.000 intron (NM_032547, intron 2 of 4) AluSc8|SINE|Alu 5729 NR_033939 100129858 Hs.660477 NR_033939 ENSG00000196951 SCOC-AS1 - SCOC antisense RNA 1 ncRNA chr1-13048 chr1 171495787 171495997 + 6.01 0.000 intron (NM_015172, intron 1 of 33) MLT1A|LTR|ERVL-MaLR 10362 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding chr3-8965 chr3 15316586 15316796 + 6.01 0.000 intron (NM_001018009, intron 2 of 8) U13|snRNA|snRNA 15895 NM_004844 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr13-3955 chr13 61370991 61371201 + 6.01 0.000 Intergenic Charlie4z|DNA|hAT-Charlie 44426 NM_022843 64881 Hs.391781 NM_022843 ENSG00000280165 PCDH20 PCDH13 protocadherin 20 protein-coding chr20-2995 chr20 44022658 44022868 + 6.01 0.000 intron (NM_001098797, intron 3 of 8) MamTip3|DNA|hAT-Tip100 76867 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr9-7957 chr9 91427827 91428037 + 6.01 0.000 Intergenic AluJb|SINE|Alu -3306 NM_001290000 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr2-12882 chr2 98221760 98221970 + 6.01 0.000 intron (NR_144297, intron 14 of 18) intron (NR_144297, intron 14 of 18) 72332 NM_001345864 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr14-4014 chr14 42398015 42398225 + 6.01 0.000 Intergenic L1ME3A|LINE|L1 791264 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr13-4422 chr13 110546872 110547082 + 6.01 0.000 intron (NM_017817, intron 1 of 1) AluJr|SINE|Alu 14745 NM_017817 55647 Hs.743563 NM_017817 ENSG00000139832 RAB20 - RAB20, member RAS oncogene family protein-coding chr22-3731 chr22 25952320 25952530 + 6.01 0.000 intron (NM_001318245, intron 38 of 43) intron (NM_001318245, intron 38 of 43) 210237 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr6-6583 chr6 138974399 138974609 + 6.01 0.000 intron (NM_031922, intron 1 of 19) intron (NM_031922, intron 1 of 19) 13757 NM_031922 85021 Hs.334603 NM_031922 ENSG00000135597 REPS1 NBIA7|RALBP1 RALBP1 associated Eps domain containing 1 protein-coding chr4-7322 chr4 55112646 55112856 + 6.01 0.000 intron (NM_002253, intron 7 of 29) AluSq2|SINE|Alu 12844 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chrX-4450 chrX 56097929 56098139 + 6.01 0.000 intron (NM_001324104, intron 2 of 6) MSTB1|LTR|ERVL-MaLR -134322 NR_136705 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr21-1969 chr21 46403027 46403237 + 6.01 0.000 intron (NM_001315529, intron 27 of 46) intron (NM_001315529, intron 27 of 46) -55759 NM_015151 23181 Hs.189585 NM_015151 ENSG00000160305 DIP2A C21orf106|DIP2 disco interacting protein 2 homolog A protein-coding chr1-8198 chr1 22239730 22239940 + 6.01 0.000 Intergenic MIRb|SINE|MIR -26404 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr15-2035 chr15 51679669 51679879 + 6.01 0.000 Intergenic Intergenic -1579 NM_001165257 29106 Hs.232618 NM_013243 ENSG00000104112 SCG3 SGIII secretogranin III protein-coding chr3-7802 chr3 89289979 89290189 + 6.01 0.000 intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 182463 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr3-9194 chr3 36244076 36244286 + 6.01 0.000 Intergenic Intergenic -136306 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr8-6355 chr8 52577716 52577926 + 6.01 0.000 Intergenic Intergenic -12391 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr2-11495 chr2 235412588 235412798 + 6.01 0.000 Intergenic Intergenic -81350 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr2-7968 chr2 64212454 64212664 + 6.01 0.000 Intergenic Intergenic -7074 NR_033837 150992 Hs.272318 NR_033837 ENSG00000230923 LINC00309 NCRNA00309 long intergenic non-protein coding RNA 309 ncRNA chr5-7739 chr5 59994508 59994718 + 6.01 0.000 intron (NM_001165899, intron 2 of 16) MLT1J2|LTR|ERVL-MaLR -100887 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr16-6968 chr16 86155256 86155466 + 6.01 0.000 Intergenic AluJb|SINE|Alu -40820 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr7-8694 chr7 74145742 74145952 + 6.01 0.000 Intergenic AluJb|SINE|Alu -28509 NM_031992 7458 Hs.520943 NM_022170 ENSG00000106682 EIF4H WBSCR1|WSCR1|eIF-4H eukaryotic translation initiation factor 4H protein-coding chr4-5582 chr4 170090161 170090371 + 6.01 0.000 promoter-TSS (NM_016228) promoter-TSS (NM_016228) -45 NM_001286682 51166 Hs.529735 NM_016228 ENSG00000109576 AADAT KAT2|KATII|KYAT2 aminoadipate aminotransferase protein-coding chr22-3705 chr22 24819549 24819759 + 6.01 0.000 intron (NM_001098498, intron 2 of 23) MIRb|SINE|MIR 13433 NM_133454 129049 Hs.474397 NM_133454 ENSG00000167037 SGSM1 RUTBC2 small G protein signaling modulator 1 protein-coding chr15-3836 chr15 79099958 79100168 + 6.01 0.000 Intergenic LTR33|LTR|ERVL -9283 NM_001145648 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr7-5174 chr7 7023631 7023841 + 6.01 0.000 Intergenic L1PA11|LINE|L1 43309 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr1-11638 chr1 245247152 245247362 + 6.01 0.000 intron (NM_018012, intron 2 of 14) AluSz|SINE|Alu -12740 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr11-9250 chr11 42710513 42710723 + 6.01 0.000 Intergenic AluSz|SINE|Alu -456928 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr9-4442 chr9 18848595 18848805 + 6.01 0.000 intron (NM_001040272, intron 23 of 28) MER58A|DNA|hAT-Charlie 184509 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr1-8344 chr1 55448198 55448408 + 6.01 0.000 Intergenic Intergenic 222662 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chrX-3688 chrX 107935473 107935683 + 6.01 0.000 intron (NR_110395, intron 1 of 3) intron (NR_110395, intron 1 of 3) 402 NR_110395 101928335 Hs.657090 NR_110395 ENSG00000236064 LOC101928335 - uncharacterized LOC101928335 ncRNA chr3-10256 chr3 123544974 123545184 + 6.01 0.000 intron (NM_001329786, intron 2 of 5) HAL1b|LINE|L1 39538 NM_001329787 201562 Hs.705480 NM_198402 ENSG00000206527 HACD2 PTPLB 3-hydroxyacyl-CoA dehydratase 2 protein-coding chr3-5488 chr3 191115811 191116021 + 6.01 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -83325 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding chr4-5080 chr4 146424000 146424210 + 6.01 0.000 intron (NM_001317816, intron 4 of 10) AluJo|SINE|Alu 15522 NR_107003 102465837 NR_107003 ENSG00000278438 MIR7849 hsa-mir-7849 microRNA 7849 ncRNA chrX-5450 chrX 154436916 154437126 + 6.01 0.000 promoter-TSS (NM_001493) promoter-TSS (NM_001493) -133 NM_001493 2664 Hs.74576 NM_001493 ENSG00000203879 GDI1 1A|GDIL|MRX41|MRX48|OPHN2|RABGD1A|RABGDIA|XAP-4 GDP dissociation inhibitor 1 protein-coding chr1-12697 chr1 51985070 51985280 + 6.01 0.000 intron (NM_002867, intron 1 of 4) MIRb|SINE|MIR 5525 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr7-8901 chr7 93095368 93095578 + 6.01 0.000 Intergenic Intergenic 22506 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding chr3-9331 chr3 45666800 45667010 + 6.01 0.000 intron (NM_014240, intron 3 of 7) intron (NM_014240, intron 3 of 7) 21977 NR_033947 644714 Hs.712889 NR_033947 LIMD1-AS1 - LIMD1 antisense RNA 1 ncRNA chr5-8537 chr5 135032902 135033112 + 6.01 0.000 promoter-TSS (NR_161235) promoter-TSS (NR_161235) -267 NR_161235 100996485 NR_161235 C5orf66 - chromosome 5 open reading frame 66 ncRNA chr12-2031 chr12 53695608 53695818 + 6.01 0.000 Intergenic Intergenic -19383 NM_001002031 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr16-6847 chr16 82379951 82380161 + 6.01 0.000 Intergenic Intergenic -209832 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr2-12249 chr2 44544417 44544627 + 6.01 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 182575 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr10-6705 chr10 123554477 123554687 + 6.01 0.000 Intergenic Intergenic -111773 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr15-3199 chr15 71916829 71917039 + 6.01 0.000 intron (NM_006901, intron 18 of 41) intron (NM_006901, intron 18 of 41) 106380 NM_014249 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding chr2-10003 chr2 22386427 22386637 + 6.01 0.000 Intergenic Charlie24|DNA|hAT-Charlie -149947 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr16-2992 chr16 25531578 25531788 + 6.01 0.000 Intergenic AluJo|SINE|Alu -160276 NM_006040 9951 Hs.655275 NM_006040 ENSG00000182601 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate-glucosamine 3-sulfotransferase 4 protein-coding chr8-5225 chr8 120600831 120601041 + 6.01 0.000 intron (NM_021021, intron 3 of 6) intron (NM_021021, intron 3 of 6) 155517 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr7-8994 chr7 100489916 100490126 + 6.01 0.000 intron (NM_173564, intron 4 of 6) intron (NM_173564, intron 4 of 6) 6094 NM_173564 222950 Hs.320086 NM_173564 ENSG00000166924 NYAP1 C7orf51 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 protein-coding chr4-7901 chr4 105990942 105991152 + 6.01 0.000 Intergenic Intergenic 31431 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chr8-4705 chr8 140581488 140581698 + 6.01 0.000 intron (NM_001164623, intron 2 of 17) intron (NM_001164623, intron 2 of 17) 54040 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr6-4559 chr6 42199585 42199795 + 6.01 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -4734 NM_002098 2979 Hs.446529 NM_002098 ENSG00000112599 GUCA1B GCAP 2|GCAP2|GUCA2|RP48 guanylate cyclase activator 1B protein-coding chr1-12881 chr1 109741735 109741945 + 6.01 0.000 promoter-TSS (NR_024537) promoter-TSS (NR_024537) -802 NR_024537 2947 Hs.2006 NM_000849 ENSG00000134202 GSTM3 GST5|GSTB|GSTM3-3|GTM3 glutathione S-transferase mu 3 protein-coding chr19-6123 chr19 3912655 3912865 + 6.01 0.000 intron (NM_033064, intron 8 of 12) AluJr|SINE|Alu -20343 NM_001289117 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr17-7398 chr17 8382472 8382682 + 6.01 0.000 intron (NM_000987, intron 1 of 3) intron (NM_000987, intron 1 of 3) 616 NM_001315530 6154 Hs.482144 NM_000987 ENSG00000161970 RPL26 DBA11|L26 ribosomal protein L26 protein-coding chr20-1511 chr20 36428435 36428645 + 6.01 0.000 intron (NM_001365621, intron 2 of 12) intron (NM_001365621, intron 2 of 12) -32928 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr1-8257 chr1 34170900 34171110 + 6.01 0.000 intron (NM_032884, intron 1 of 6) L2b|LINE|L2 4012 NM_032884 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr2-10364 chr2 170239362 170239572 + 6.01 0.000 intron (NM_001083615, intron 7 of 33) intron (NM_001083615, intron 7 of 33) 61320 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr1-15556 chr1 158751708 158751918 + 6.01 0.000 Intergenic MER52D|LTR|ERV1 -3003 NM_001005184 128371 Hs.553591 NM_001005184 ENSG00000180433 OR6K6 OR1-21 olfactory receptor family 6 subfamily K member 6 protein-coding chr12-3123 chr12 31582179 31582389 + 6.01 0.000 intron (NM_001308339, intron 1 of 22) intron (NM_001308339, intron 1 of 22) -7639 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr4-6759 chr4 6361273 6361483 + 6.01 0.000 intron (NM_001206994, intron 6 of 9) MIRb|SINE|MIR 20490 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr4-7829 chr4 100667824 100668034 + 6.01 0.000 intron (NR_046811, intron 2 of 3) L1PA4|LINE|L1 7184 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr6-7559 chr6 71792346 71792556 + 6.01 0.000 Intergenic L1M3f|LINE|L1 -94252 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr3-4685 chr3 48819671 48819881 + 6.01 0.000 intron (NM_001321982, intron 1 of 11) intron (NM_001321982, intron 1 of 11) 28098 NM_001321989 5576 Hs.631923 NM_004157 ENSG00000114302 PRKAR2A PKR2|PRKAR2 protein kinase cAMP-dependent type II regulatory subunit alpha protein-coding chr2-10792 chr2 44996785 44996995 + 6.01 0.000 Intergenic Intergenic 12562 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr6-8181 chr6 132860351 132860561 + 6.01 0.000 Intergenic L3|LINE|CR1 43237 NR_002436 594839 Hs.671378 NR_002436 ENSG00000200534 SNORA33 ACA33 small nucleolar RNA, H/ACA box 33 snoRNA chr1-16112 chr1 204406232 204406442 + 6.01 0.000 intron (NM_032833, intron 1 of 1) intron (NM_032833, intron 1 of 1) 5480 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr15-2514 chr15 39172757 39172967 + 6.01 0.000 Intergenic Intergenic -77807 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr4-6519 chr4 165403478 165403688 + 6.01 0.000 intron (NM_001873, intron 1 of 8) intron (NM_001873, intron 1 of 8) 17341 NR_030304 693163 NR_030304 ENSG00000207559 MIR578 MIRN578|hsa-mir-578 microRNA 578 ncRNA chr4-7882 chr4 105126562 105126772 + 6.01 0.000 Intergenic Intergenic -19208 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr8-7020 chr8 110263793 110264003 + 6.01 0.000 Intergenic MER54A|LTR|ERVL -288127 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr6-7608 chr6 76628463 76628673 + 6.01 0.000 Intergenic L1PA5|LINE|L1 -34945 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr2-7434 chr2 11023752 11023962 + 6.01 0.000 Intergenic Intergenic 108319 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr5-7299 chr5 14580837 14581047 + 6.01 0.000 promoter-TSS (NM_019018) promoter-TSS (NM_019018) -850 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 OTULINL FAM105A|NET20 OTU deubiquitinase with linear linkage specificity like protein-coding chr7-8259 chr7 36785079 36785289 + 6.01 0.000 Intergenic Intergenic -60635 NM_001177507 313 Hs.488007 NM_001637 ENSG00000136250 AOAH - acyloxyacyl hydrolase protein-coding chr18-2868 chr18 9317131 9317341 + 6.01 0.000 Intergenic L1ME1|LINE|L1 -17537 NM_020648 57045 Hs.514685 NM_020648 ENSG00000128791 TWSG1 TSG twisted gastrulation BMP signaling modulator 1 protein-coding chr2-14220 chr2 209734680 209734890 + 6.01 0.000 TTS (NM_031847) TTS (NM_031847) -37047 NM_182587 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr1-11777 chr1 22583202 22583412 + 6.01 0.000 intron (NM_020526, intron 3 of 16) intron (NM_020526, intron 3 of 16) 19818 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr21-1086 chr21 32964379 32964589 + 6.01 0.000 Intergenic MER41A|LTR|ERV1 5596 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA chr22-1953 chr22 48756471 48756681 + 6.01 0.000 Intergenic Intergenic -23719 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr1-12893 chr1 110767503 110767713 + 6.01 0.000 Intergenic Intergenic -92668 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding chr17-5952 chr17 76335662 76335872 + 6.01 0.000 intron (NM_001330503, intron 2 of 8) AluJr4|SINE|Alu 18149 NM_001330503 5635 Hs.77498 NM_002766 ENSG00000161542 PRPSAP1 PAP39 phosphoribosyl pyrophosphate synthetase associated protein 1 protein-coding chr6-6386 chr6 75892528 75892738 + 6.01 0.000 exon (NM_001368866, exon 28 of 35) exon (NM_001368866, exon 28 of 35) 143394 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr10-2975 chr10 71659259 71659469 + 6.01 0.000 intron (NM_022124, intron 13 of 67) intron (NM_022124, intron 13 of 67) 60414 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr12-6939 chr12 26030381 26030591 + 6.01 0.000 intron (NM_001164747, intron 2 of 5) intron (NM_001164747, intron 2 of 5) -22078 NM_001164746 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr11-4806 chr11 4383892 4384102 + 6.01 0.000 TTS (NM_003141) TTS (NM_003141) 9705 NM_003141 6737 Hs.532357 NM_003141 ENSG00000132109 TRIM21 RNF81|RO52|Ro/SSA|SSA|SSA1 tripartite motif containing 21 protein-coding chr10-6083 chr10 131272491 131272701 + 6.01 0.000 intron (NM_174937, intron 3 of 11) intron (NM_174937, intron 3 of 11) 39125 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr4-5442 chr4 21436703 21436913 + 6.01 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) 27950 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr3-7606 chr3 14993024 14993234 + 6.01 0.000 intron (NM_003298, intron 1 of 14) intron (NM_003298, intron 1 of 14) -44688 NR_046251 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr6-2547 chr6 35568946 35569156 + 6.01 0.000 Intergenic Intergenic -56155 NM_003322 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr7-4998 chr7 357143 357353 + 6.01 0.000 Intergenic Intergenic -22177 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chrX-4924 chrX 109890933 109891143 + 6.01 0.000 Intergenic Intergenic 20637 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr6-7717 chr6 89372180 89372390 + 6.01 0.000 intron (NM_021244, intron 6 of 6) intron (NM_021244, intron 6 of 6) -19563 NM_016021 51465 Hs.163776 NM_016021 ENSG00000198833 UBE2J1 CGI-76|HSPC153|HSPC205|HSU93243|NCUBE-1|NCUBE1|UBC6|UBC6E|Ubc6p ubiquitin conjugating enzyme E2 J1 protein-coding chr18-1583 chr18 36704947 36705157 + 6.01 0.000 intron (NM_001281740, intron 17 of 28) intron (NM_001281740, intron 17 of 28) -41634 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr1-9566 chr1 42179243 42179453 + 6.01 0.000 3' UTR (NM_001198852, exon 12 of 12) 3' UTR (NM_001198852, exon 12 of 12) -14603 NM_033553 2980 Hs.778 NM_033553 ENSG00000197273 GUCA2A GCAP-I|GUCA2|STARA guanylate cyclase activator 2A protein-coding chr2-7619 chr2 26724715 26724925 + 6.01 0.000 intron (NM_002246, intron 1 of 1) intron (NM_002246, intron 1 of 1) 32098 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr3-7703 chr3 47750796 47751006 + 6.01 0.000 intron (NM_003074, intron 2 of 27) AluSx|SINE|Alu 30992 NM_003074 6599 Hs.476179 NM_003074 ENSG00000173473 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding chr3-10602 chr3 144015251 144015461 + 6.01 0.000 Intergenic Intergenic 42275 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr4-5892 chr4 132127590 132127800 + 6.01 0.000 Intergenic ERV24_Prim-int|LTR|ERV1 362857 NR_125884 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr8-2272 chr8 97240235 97240445 + 6.01 0.000 intron (NR_125390, intron 2 of 2) L2b|LINE|L2 37588 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr17-3956 chr17 62943185 62943395 + 6.01 0.000 promoter-TSS (NR_030363) promoter-TSS (NR_030363) -925 NR_030363 693218 NR_030363 ENSG00000207552 MIR633 MIRN633|hsa-mir-633 microRNA 633 ncRNA chr7-8549 chr7 55977842 55978052 + 6.01 0.000 intron (NM_001202469, intron 1 of 7) intron (NM_001202469, intron 1 of 7) 13362 NM_001202469 2631 Hs.591069 NM_001483 ENSG00000146729 NIPSNAP2 GBAS nipsnap homolog 2 protein-coding chr16-3678 chr16 211611 211821 + 6.01 0.000 intron (NM_001330420, intron 3 of 9) intron (NM_001330420, intron 3 of 9) 17733 NM_018032 55692 Hs.16803 NM_018032 ENSG00000007392 LUC7L LUC7B1|Luc7|SR+89|hLuc7B1 LUC7 like protein-coding chr6-7801 chr6 98637894 98638104 + 6.01 0.000 Intergenic Intergenic 193701 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr1-10313 chr1 151597420 151597630 + 6.01 0.000 Intergenic Intergenic -14525 NM_001330723 81609 Hs.192326 NM_030918 ENSG00000143376 SNX27 MRT1|MY014 sorting nexin 27 protein-coding chr6-6601 chr6 146306923 146307133 + 6.01 0.000 intron (NM_001278065, intron 4 of 9) intron (NM_001278065, intron 4 of 9) -236805 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chrX-921 chrX 20745997 20746207 + 6.01 0.000 Intergenic Intergenic -479193 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr13-1359 chr13 72971097 72971307 + 6.01 0.000 intron (NR_146206, intron 15 of 16) (GT)n|Simple_repeat|Simple_repeat -83774 NM_001286818 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr1-8901 chr1 6146644 6146854 + 6.01 0.000 exon (NM_015557, exon 10 of 42) exon (NM_015557, exon 10 of 42) 33572 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr3-6581 chr3 124267040 124267250 + 6.01 0.000 intron (NM_001024660, intron 4 of 59) intron (NM_001024660, intron 4 of 59) -107187 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr11-6553 chr11 70504255 70504465 + 6.01 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) 105831 NM_005231 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr8-3299 chr8 24004412 24004622 + 6.01 0.000 Intergenic Intergenic -149711 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr2-4564 chr2 70132238 70132448 + 6.01 0.000 Intergenic Intergenic -7027 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr10-8815 chr10 108702924 108703134 + 6.01 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -633736 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr2-9987 chr2 14776213 14776423 + 6.01 0.000 Intergenic Intergenic 143601 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr17-7127 chr17 76308569 76308779 + 6.01 0.000 promoter-TSS (NR_130649) promoter-TSS (NR_130649) -994 NM_032134 84074 Hs.252739 NM_032134 ENSG00000129646 QRICH2 SPGF35 glutamine rich 2 protein-coding chr8-5935 chr8 19086960 19087170 + 6.01 0.000 Intergenic Intergenic -73362 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr11-7589 chr11 37490059 37490269 + 6.01 0.000 Intergenic Intergenic -448437 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chrX-3119 chrX 7889804 7890014 + 6.01 0.000 Intergenic AluJr|SINE|Alu 37504 NM_004650 8228 Hs.264 NM_004650 ENSG00000006757 PNPLA4 DXS1283E|GS2|iPLA2eta patatin like phospholipase domain containing 4 protein-coding chr9-8426 chr9 121344963 121345173 + 6.01 0.000 intron (NM_198194, intron 2 of 2) L1M5|LINE|L1 25182 NR_073037 2040 Hs.253903 NM_004099 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding chr5-4273 chr5 141879238 141879448 + 6.01 0.000 promoter-TSS (NM_032420) promoter-TSS (NM_032420) -933 NM_002587 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr2-9693 chr2 45729209 45729419 + 6.01 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 77639 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr11-9076 chr11 30390703 30390913 + 6.01 0.000 intron (NM_001145399, intron 6 of 6) MLT1H|LTR|ERVL-MaLR 67704 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr4-8208 chr4 135028560 135028770 + 6.01 0.000 Intergenic MLT2F|LTR|ERVL 94894 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr17-2434 chr17 2724751 2724961 + 6.01 0.000 exon (NM_001355573, exon 4 of 4) exon (NM_001355573, exon 4 of 4) 12547 NR_136412 105371592 Hs.731739 NR_136412 ENSG00000262050 LOC105371592 - uncharacterized LOC105371592 ncRNA chr15-4407 chr15 43932636 43932846 + 6.01 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) -54570 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr7-6521 chr7 32247219 32247429 + 6.01 0.000 intron (NM_001322059, intron 1 of 17) L2a|LINE|L2 52004 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr2-9133 chr2 209305889 209306099 + 6.01 0.000 Intergenic MER52A|LTR|ERV1 -118053 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr10-7035 chr10 79391266 79391476 + 6.01 0.000 intron (NM_153367, intron 3 of 3) intron (NM_153367, intron 3 of 3) 43902 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr10-6689 chr10 118181305 118181515 + 6.01 0.000 intron (NR_026940, intron 3 of 3) MLT1N2|LTR|ERVL-MaLR -134469 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr2-11699 chr2 9448007 9448217 + 6.01 0.000 intron (NM_016207, intron 10 of 17) intron (NM_016207, intron 10 of 17) 24458 NM_016207 51692 Hs.515972 NM_016207 ENSG00000119203 CPSF3 CPSF-73|CPSF73 cleavage and polyadenylation specific factor 3 protein-coding chr12-5996 chr12 99029768 99029978 + 6.01 0.000 intron (NM_152788, intron 17 of 25) MIRc|SINE|MIR -63486 NR_110095 101928937 Hs.555499 NR_110095 ENSG00000258039 LOC101928937 - uncharacterized LOC101928937 ncRNA chr18-1052 chr18 13259191 13259401 + 6.01 0.000 intron (NM_181482, intron 1 of 5) AluJo|SINE|Alu -18809 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr5-7492 chr5 34868014 34868224 + 6.01 0.000 intron (NM_001317949, intron 7 of 10) MIR|SINE|MIR 28738 NM_001317949 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding chr17-6256 chr17 30849339 30849549 + 6.01 0.000 intron (NM_024857, intron 6 of 22) L1ME1|LINE|L1 17478 NM_024857 79915 Hs.528902 NM_024857 ENSG00000176208 ATAD5 C17orf41|ELG1|FRAG1 ATPase family AAA domain containing 5 protein-coding chr11-7853 chr11 117548555 117548765 + 6.01 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 220806 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chrX-2479 chrX 87111344 87111554 + 6.01 0.000 Intergenic L1PA10|LINE|L1 -406353 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chrX-5146 chrX 130721384 130721594 + 6.01 0.000 intron (NM_182314, intron 3 of 15) intron (NM_182314, intron 3 of 15) -81147 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr15-4568 chr15 58608123 58608333 + 6.01 0.000 intron (NM_001320570, intron 13 of 14) intron (NM_001320570, intron 13 of 14) 85379 NR_073415 664618 Hs.670224 NR_002927 HSP90AB4P HSP90Bd heat shock protein 90 alpha family class B member 4, pseudogene pseudo chr6-4262 chr6 9921525 9921735 + 6.01 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -482872 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr8-5489 chr8 52312618 52312828 + 6.01 0.000 intron (NR_148195, intron 2 of 3) intron (NR_148195, intron 2 of 3) -58231 NM_001352845 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr4-7238 chr4 45222848 45223058 + 6.01 0.000 Intergenic Intergenic -496319 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr11-7145 chr11 126686085 126686295 + 6.01 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) 30104 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr10-4387 chr10 48188216 48188426 + 6.01 0.000 intron (NM_001018071, intron 16 of 28) intron (NM_001018071, intron 16 of 28) -13178 NM_001042512 143162 Hs.664786 NM_152428 ENSG00000170324 FRMPD2 PDZD5C|PDZK4|PDZK5C FERM and PDZ domain containing 2 protein-coding chr13-4078 chr13 76980064 76980274 + 6.01 0.000 Intergenic CpG -11912 NM_001366624 1203 Hs.30213 NM_006493 ENSG00000102805 CLN5 - CLN5 intracellular trafficking protein protein-coding chr13-4029 chr13 73028851 73029061 + 6.01 0.000 Intergenic L2a|LINE|L2 -26020 NM_001286818 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr16-6778 chr16 77446417 77446627 + 6.01 0.000 Intergenic Intergenic -11488 NM_001326358 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr17-6239 chr17 20799460 20799670 + 6.01 0.000 Intergenic Intergenic -68962 NR_160710 440416 Hs.661076 NR_104185 ENSG00000233098 CCDC144NL-AS1 - CCDC144NL antisense RNA 1 ncRNA chr9-8500 chr9 124613975 124614185 + 6.01 0.000 intron (NM_033334, intron 2 of 9) L1MEc|LINE|L1 -44356 NR_038975 100379345 Hs.660412 NR_038975 ENSG00000224020 MIR181A2HG - MIR181A2 host gene ncRNA chrX-3798 chrX 139160722 139160932 + 6.01 0.000 intron (NM_001139501, intron 2 of 7) L1PA7|LINE|L1 44196 NM_001139501 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr4-7526 chr4 75392323 75392533 + 6.01 0.000 Intergenic Intergenic 38352 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr7-3785 chr7 85536263 85536473 + 6.01 0.000 Intergenic Intergenic 115246 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr9-6087 chr9 137504854 137505064 + 6.01 0.000 intron (NM_001098537, intron 14 of 34) AluSx1|SINE|Alu 45443 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr9-7417 chr9 21715634 21715844 + 6.01 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -86897 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr5-3927 chr5 176609881 176610091 + 6.01 0.000 intron (NM_052899, intron 1 of 1) CpG 170 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr2-13753 chr2 170198548 170198758 + 6.01 0.000 intron (NM_001083615, intron 1 of 33) intron (NM_001083615, intron 1 of 33) 20506 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr12-5235 chr12 108541091 108541301 + 6.01 0.000 intron (NM_014706, intron 6 of 18) AluSx1|SINE|Alu 19977 NM_014706 9733 Hs.584842 NM_014706 ENSG00000075856 SART3 DSAP1|P100|RP11-13G14|TIP110|p110|p110(nrb) spliceosome associated factor 3, U4/U6 recycling protein protein-coding chr8-3101 chr8 30477158 30477368 + 6.01 0.000 intron (NM_001008710, intron 2 of 8) AluY|SINE|Alu -91862 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr5-8932 chr5 158086836 158087046 + 6.01 0.000 Intergenic Intergenic -227796 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr6-7071 chr6 33543682 33543892 + 6.01 0.000 Intergenic Intergenic 36489 NM_001188 578 Hs.485139 NM_001188 ENSG00000030110 BAK1 BAK|BAK-LIKE|BCL2L7|CDN1 BCL2 antagonist/killer 1 protein-coding chrX-2199 chrX 40611680 40611890 + 6.01 0.000 Intergenic AluJo|SINE|Alu -11781 NM_001195522 347411 Hs.128084 NM_001195522 ENSG00000238205 MPC1L SLC54A3 mitochondrial pyruvate carrier 1 like protein-coding chrX-4258 chrX 39897346 39897556 + 6.01 0.000 Intergenic Intergenic 59890 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr2-11893 chr2 23758485 23758695 + 6.01 0.000 intron (NR_125717, intron 25 of 28) intron (NR_125717, intron 25 of 28) 168533 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr9-7255 chr9 5111329 5111539 + 6.01 0.000 intron (NM_004972, intron 22 of 24) CpG 69741 NM_001322204 3717 Hs.656213 NM_004972 ENSG00000096968 JAK2 JTK10|THCYT3 Janus kinase 2 protein-coding chr12-4072 chr12 53645355 53645565 + 6.01 0.000 Intergenic L1PA6|LINE|L1 -19045 NM_001206682 11016 Hs.12286 NM_006856 ENSG00000170653 ATF7 ATFA activating transcription factor 7 protein-coding chr21-1831 chr21 41064544 41064754 + 6.01 0.000 Intergenic Intergenic 83415 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr12-3579 chr12 39258198 39258408 + 6.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR 184817 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr9-7357 chr9 15889559 15889769 + 6.01 0.000 intron (NM_001355547, intron 23 of 24) intron (NM_001355547, intron 23 of 24) 325686 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr22-4002 chr22 39486002 39486212 + 6.01 0.000 intron (NM_002409, intron 1 of 1) intron (NM_002409, intron 1 of 1) -1117 NM_001098270 4248 Hs.276808 NM_002409 ENSG00000128268 MGAT3 GNT-III|GNT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase protein-coding chr5-7381 chr5 21831196 21831406 + 6.01 0.000 intron (NM_004061, intron 8 of 14) intron (NM_004061, intron 8 of 14) -53153 NR_132788 106635540 NR_132788 SNORA105B - small nucleolar RNA, H/ACA box 105B snoRNA chr13-2183 chr13 19280478 19280688 + 6.01 0.000 intron (NR_027248, intron 17 of 20) L1PA8|LINE|L1 64390 NR_027248 100101938 Hs.129283 NR_027248 ANKRD26P3 LINC00414 ankyrin repeat domain 26 pseudogene 3 pseudo chr20-4503 chr20 63260685 63260895 + 6.01 0.000 non-coding (NR_024389, exon 1 of 1) non-coding (NR_024389, exon 1 of 1) -6327 NM_152864 128414 Hs.46627 NM_152864 ENSG00000101198 NKAIN4 C20orf58|FAM77A|bA261N11.2 sodium/potassium transporting ATPase interacting 4 protein-coding chr4-5896 chr4 133774117 133774327 + 6.01 0.000 Intergenic Intergenic 427567 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr1-5998 chr1 47851189 47851399 + 6.01 0.000 intron (NM_001194986, intron 2 of 6) intron (NM_001194986, intron 2 of 6) 146091 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr6-6258 chr6 34366009 34366219 + 6.01 0.000 intron (NM_001202470, intron 5 of 8) AluJo|SINE|Alu 26555 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr6-5508 chr6 165236609 165236819 + 6.01 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 72891 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr9-7649 chr9 64067555 64067765 + 6.01 0.000 Intergenic Intergenic 50710 NR_033856 644316 Hs.632789 NR_033856 FLJ43315 - asparagine synthetase pseudogene pseudo chr3-10178 chr3 118446792 118447002 + 6.01 0.000 Intergenic Intergenic -194871 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr3-8943 chr3 14388286 14388496 + 6.01 0.000 Intergenic L2b|LINE|L2 -14185 NM_001134367 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr13-3815 chr13 46524215 46524425 + 6.01 0.000 Intergenic Intergenic -28850 NM_001164211 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr6-6417 chr6 86937014 86937224 + 6.01 0.000 promoter-TSS (NM_000865) promoter-TSS (NM_000865) -409 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr13-3353 chr13 75019761 75019971 + 6.01 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 220515 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr10-2017 chr10 68418591 68418801 + 6.01 0.000 intron (NM_001080449, intron 19 of 20) AluSx1|SINE|Alu -11402 NM_001042417 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr20-2296 chr20 5215812 5216022 + 6.01 0.000 Intergenic Intergenic 88909 NM_003818 8760 Hs.126857 NM_003818 ENSG00000101290 CDS2 - CDP-diacylglycerol synthase 2 protein-coding chr7-5996 chr7 103394710 103394920 + 6.01 0.000 intron (NR_135802, intron 9 of 17) MLT1H1|LTR|ERVL-MaLR 47172 NM_002803 5701 Hs.437366 NM_002803 ENSG00000161057 PSMC2 MSS1|Nbla10058|S7 proteasome 26S subunit, ATPase 2 protein-coding chr3-10389 chr3 129067131 129067341 + 6.01 0.000 Intergenic Charlie1b|DNA|hAT-Charlie 6469 NM_000174 2815 Hs.1144 NM_000174 ENSG00000169704 GP9 CD42a|GPIX glycoprotein IX platelet protein-coding chr17-8324 chr17 72432401 72432611 + 6.01 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 89695 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr5-3952 chr5 4465611 4465821 + 6.01 0.000 Intergenic (GTAT)n|Simple_repeat|Simple_repeat -307765 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA chr2-11645 chr2 6322196 6322406 + 6.01 0.000 Intergenic L1PA6|LINE|L1 53121 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chrX-5272 chrX 139724617 139724827 + 6.01 0.000 Intergenic MIR|SINE|MIR -16500 NM_001099855 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr8-4558 chr8 125842297 125842507 + 6.01 0.000 Intergenic L1PA15|LINE|L1 108795 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr14-2818 chr14 23160999 23161209 + 6.01 0.000 intron (NM_012244, intron 3 of 10) intron (NM_012244, intron 3 of 10) -5646 NM_001267036 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr10-7322 chr10 133481671 133481881 + 6.01 0.000 Intergenic Intergenic 27848 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr9-7596 chr9 36781592 36781802 + 6.01 0.000 Intergenic Intergenic 41902 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr11-6177 chr11 44934471 44934681 + 6.01 0.000 non-coding (NR_134612, exon 8 of 8) non-coding (NR_134612, exon 8 of 8) 15584 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr7-9150 chr7 111962872 111963082 + 6.01 0.000 intron (NM_001363540, intron 8 of 52) intron (NM_001363540, intron 8 of 52) 154472 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr6-6079 chr6 143159036 143159246 + 6.01 0.000 intron (NM_001366353, intron 2 of 4) L2c|LINE|L2 -5641 NM_001366361 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr3-5927 chr3 43180099 43180309 + 6.01 0.000 Intergenic Intergenic -74125 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chr11-5384 chr11 65808818 65809028 + 6.01 0.000 Intergenic Intergenic -18055 NR_108085 101927828 Hs.666246 NR_108085 ENSG00000255120 OVOL1-AS1 - OVOL1 antisense RNA 1 ncRNA chr10-9106 chr10 126767317 126767527 + 6.01 0.000 Intergenic L1PA7|LINE|L1 -96912 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr10-6866 chr10 29688270 29688480 + 6.01 0.000 intron (NM_001323599, intron 1 of 38) intron (NM_001323599, intron 1 of 38) 47426 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr8-7142 chr8 121507058 121507268 + 6.01 0.000 Intergenic Intergenic -132183 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr8-5564 chr8 78794088 78794298 + 6.01 0.000 intron (NM_001199886, intron 2 of 4) Tigger1|DNA|TcMar-Tigger 11270 NM_000880 3574 Hs.591873 NM_000880 ENSG00000104432 IL7 IL-7 interleukin 7 protein-coding chr1-10088 chr1 94808302 94808512 + 6.01 0.000 intron (NR_160783, intron 1 of 3) intron (NR_160783, intron 1 of 3) 11825 NR_160784 101928079 Hs.596857 NR_104131 ENSG00000224081 SLC44A3-AS1 LINC01057|XLOC_000303 SLC44A3 antisense RNA 1 ncRNA chr3-5936 chr3 44133816 44134026 + 6.01 0.000 Intergenic Intergenic 19709 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr18-3131 chr18 38447045 38447255 + 6.01 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 790015 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr11-5014 chr11 76597417 76597627 + 6.01 0.000 Intergenic Intergenic 72416 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr11-9165 chr11 35029882 35030092 + 6.01 0.000 Intergenic Intergenic 88150 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr7-4919 chr7 131424144 131424354 + 6.01 0.000 intron (NM_001321316, intron 8 of 17) intron (NM_001321316, intron 8 of 17) 96373 NM_001321316 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr7-3276 chr7 21350391 21350601 + 6.01 0.000 Intergenic LTR32|LTR|ERVL -77587 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr6-6614 chr6 148936209 148936419 + 6.01 0.000 intron (NM_005715, intron 2 of 7) intron (NM_005715, intron 2 of 7) 28370 NR_038408 100128176 Hs.557541 NR_038408 UST-AS1 - UST antisense RNA 1 ncRNA chr14-2349 chr14 21557579 21557789 + 6.01 0.000 Intergenic UCON105|Unknown|Unknown 13060 NM_001005465 26533 Hs.554581 NM_001005465 ENSG00000169208 OR10G3 OR14-40 olfactory receptor family 10 subfamily G member 3 protein-coding chr18-2066 chr18 48080023 48080233 + 6.01 0.000 intron (NM_001371286, intron 3 of 4) intron (NM_001371286, intron 3 of 4) 57020 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr8-6708 chr8 84825849 84826059 + 6.01 0.000 intron (NM_001287244, intron 3 of 7) L1PA16|LINE|L1 120027 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr22-3138 chr22 23115119 23115329 + 6.01 0.000 intron (NM_002073, intron 2 of 2) intron (NM_002073, intron 2 of 2) 26766 NM_014433 27156 Hs.526920 NM_014433 ENSG00000100218 RSPH14 RTDR1 radial spoke head 14 homolog protein-coding chr13-2130 chr13 97810292 97810502 + 6.01 0.000 Intergenic Intergenic -143278 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr1-9489 chr1 37067877 37068087 + 6.01 0.000 Intergenic Intergenic -33467 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr8-3373 chr8 52605474 52605684 + 6.01 0.000 Intergenic Intergenic -40149 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr1-7820 chr1 58773634 58773844 + 6.01 0.000 Intergenic Intergenic 10308 NM_002228 3725 Hs.696684 NM_002228 ENSG00000177606 JUN AP-1|AP1|c-Jun|p39 Jun proto-oncogene, AP-1 transcription factor subunit protein-coding chr11-5287 chr11 39255322 39255532 + 6.01 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 606569 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr18-1860 chr18 24985792 24986002 + 6.01 0.000 intron (NR_146903, intron 1 of 1) intron (NR_146903, intron 1 of 1) 2082 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr15-2037 chr15 51793772 51793982 + 6.01 0.000 intron (NM_014548, intron 7 of 9) intron (NM_014548, intron 7 of 9) -35776 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr5-8238 chr5 110206663 110206873 + 6.01 0.000 Intergenic HERVL-int|LTR|ERVL 307147 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr6-8296 chr6 143504009 143504219 + 6.01 0.000 exon (NM_032020, exon 3 of 7) exon (NM_032020, exon 3 of 7) 7606 NM_032020 2519 Hs.17680 NM_032020 ENSG00000001036 FUCA2 dJ20N2.5 alpha-L-fucosidase 2 protein-coding chr4-4192 chr4 11677000 11677210 + 6.01 0.000 Intergenic L1PA8|LINE|L1 92363 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr2-10420 chr2 196586742 196586952 + 6.01 0.000 intron (NM_001348768, intron 1 of 28) Charlie25|DNA|hAT-Charlie 6136 NM_020760 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr14-5350 chr14 103067768 103067978 + 6.01 0.000 Intergenic Intergenic -10324 NM_006035 9578 Hs.654634 NM_006035 ENSG00000198752 CDC42BPB MRCKB CDC42 binding protein kinase beta protein-coding chr2-14048 chr2 195417993 195418203 + 6.01 0.000 Intergenic AluJb|SINE|Alu -238860 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr1-14536 chr1 51668994 51669204 + 6.01 0.000 intron (NM_001350209, intron 2 of 23) MIRb|SINE|MIR 52007 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr8-2738 chr8 102928282 102928492 + 6.01 0.000 intron (NR_126339, intron 2 of 2) SVA_D|Retroposon|SVA 64116 NR_126339 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA chr20-3295 chr20 10200673 10200883 + 6.01 0.000 intron (NR_040710, intron 1 of 4) intron (NR_040710, intron 1 of 4) -18020 NM_130811 6616 Hs.167317 NM_003081 ENSG00000132639 SNAP25 CMS18|RIC-4|RIC4|SEC9|SNAP|SNAP-25|SUP|bA416N4.2|dJ1068F16.2 synaptosome associated protein 25 protein-coding chrX-3650 chrX 99736575 99736785 + 5.89 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 673593 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-4309 chr8 98169995 98170205 + 5.89 0.000 Intergenic Intergenic 52260 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr9-7836 chr9 83403904 83404114 + 5.89 0.000 intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 63733 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr18-1165 chr18 12980135 12980345 + 5.89 0.000 intron (NM_031216, intron 6 of 8) SVA_D|Retroposon|SVA -11122 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr14-3191 chr14 72202110 72202320 + 5.89 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 268688 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chrX-3047 chrX 101079953 101080163 + 5.89 0.000 intron (NM_021637, intron 1 of 1) intron (NM_021637, intron 1 of 1) 1179 NM_021637 59353 Hs.45140 NM_021637 ENSG00000126950 TMEM35A TMEM35 transmembrane protein 35A protein-coding chr12-4350 chr12 2821448 2821658 + 5.89 0.000 non-coding (NR_147202, exon 8 of 16) non-coding (NR_147202, exon 8 of 16) -8629 NR_146318 283440 Hs.448720 NR_033958 ENSG00000256150 ITFG2-AS1 - ITFG2 antisense RNA 1 ncRNA chr6-5324 chr6 144179741 144179951 + 5.89 0.000 intron (NM_003764, intron 1 of 1) intron (NM_003764, intron 1 of 1) 29329 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding chr3-5710 chr3 15279993 15280203 + 5.89 0.000 intron (NM_001018009, intron 3 of 8) intron (NM_001018009, intron 3 of 8) 25914 NR_046084 100505696 Hs.745026 NR_046084 ENSG00000224660 SH3BP5-AS1 - SH3BP5 antisense RNA 1 ncRNA chr19-5918 chr19 49238401 49238611 + 5.89 0.000 Intergenic AluY|SINE|Alu 70362 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr4-7885 chr4 105187209 105187419 + 5.89 0.000 intron (NR_126420, intron 2 of 5) intron (NR_126420, intron 2 of 5) 40629 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr6-6316 chr6 44200761 44200971 + 5.89 0.000 Intergenic Intergenic -16060 NM_001315494 101929726 Hs.438979 NM_001315494 ENSG00000262179 MYMX MINION|hMINION myomixer, myoblast fusion factor protein-coding chrX-3420 chrX 13567365 13567575 + 5.89 0.000 Intergenic Intergenic -2131 NM_015507 25975 Hs.12844 NM_015507 ENSG00000198759 EGFL6 MAEG|W80 EGF like domain multiple 6 protein-coding chr10-6562 chr10 74028173 74028383 + 5.89 0.000 intron (NM_014000, intron 1 of 21) AluJr|SINE|Alu 30162 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr22-3633 chr22 21741779 21741989 + 5.89 0.000 Intergenic Intergenic -6090 NR_130910 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr7-9259 chr7 123758264 123758474 + 5.89 0.000 Intergenic MER58A|DNA|hAT-Charlie -9366 NM_003941 8976 Hs.143728 NM_003941 ENSG00000106299 WASL N-WASP|NWASP|WASPB WASP like actin nucleation promoting factor protein-coding chr5-1551 chr5 62143710 62143920 + 5.89 0.000 Intergenic Intergenic -162347 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr11-6883 chr11 103184023 103184233 + 5.89 0.000 intron (NM_001377, intron 40 of 88) L2c|LINE|L2 74702 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr21-1542 chr21 46353436 46353646 + 5.89 0.000 intron (NM_001315529, intron 10 of 46) intron (NM_001315529, intron 10 of 46) 28874 NM_001315529 5116 Hs.474069 NM_006031 ENSG00000160299 PCNT KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4 pericentrin protein-coding chr16-6323 chr16 49266836 49267046 + 5.89 0.000 Intergenic Intergenic 14897 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding chr1-15997 chr1 197135849 197136059 + 5.89 0.000 intron (NM_001206846, intron 4 of 26) AluSz6|SINE|Alu 10715 NM_018136 259266 Hs.121028 NM_018136 ENSG00000066279 ASPM ASP|Calmbp1|MCPH5 abnormal spindle microtubule assembly protein-coding chr3-7836 chr3 109272060 109272270 + 5.89 0.000 Intergenic AluJr|SINE|Alu 44352 NM_138815 151871 Hs.351113 NM_138815 ENSG00000163530 DPPA2 CT100|ECAT15-2|PESCRG1 developmental pluripotency associated 2 protein-coding chr15-4605 chr15 60761337 60761547 + 5.89 0.000 intron (NM_134261, intron 1 of 10) Tigger14a|DNA|TcMar-Tigger 79873 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr16-6982 chr16 87036916 87037126 + 5.89 0.000 Intergenic Kanga11a|DNA|TcMar-Tc2 -20763 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr7-7093 chr7 157477132 157477342 + 5.89 0.000 intron (NR_110157, intron 2 of 3) MER72|LTR|ERV1 11006 NR_110157 101927914 Hs.623826 NR_110157 ENSG00000234210 LOC101927914 - uncharacterized LOC101927914 ncRNA chr22-1979 chr22 19552713 19552923 + 5.89 0.000 Intergenic L1MB5|LINE|L1 14021 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr8-6197 chr8 35327248 35327458 + 5.89 0.000 intron (NM_080872, intron 1 of 16) intron (NM_080872, intron 1 of 16) 91878 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr21-1912 chr21 44881416 44881626 + 5.89 0.000 Intergenic Intergenic -7618 NR_104597 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF PTTG1 interacting protein protein-coding chr11-5636 chr11 121389616 121389826 + 5.89 0.000 Intergenic Intergenic -62593 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr13-2269 chr13 27600181 27600391 + 5.89 0.000 intron (NM_153371, intron 1 of 9) MER33|DNA|hAT-Charlie 20243 NM_153371 222484 Hs.132359 NM_153371 ENSG00000139517 LNX2 PDZRN1 ligand of numb-protein X 2 protein-coding chr19-6607 chr19 28921209 28921419 + 5.89 0.000 Intergenic L2a|LINE|L2 -43817 NR_027318 148145 Hs.112651 NR_027318 ENSG00000267339 LINC00906 - long intergenic non-protein coding RNA 906 ncRNA chr4-8389 chr4 150925904 150926114 + 5.89 0.000 intron (NM_001367550, intron 4 of 56) intron (NM_001367550, intron 4 of 56) 89258 NM_001199282 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr1-12610 chr1 36719810 36720020 + 5.89 0.000 Intergenic Intergenic -236601 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr8-5689 chr8 123939523 123939733 + 5.89 0.000 intron (NM_001039112, intron 1 of 40) LTR16B|LTR|ERVL 87641 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chr10-7394 chr10 3465534 3465744 + 5.89 0.000 intron (NR_155743, intron 3 of 4) intron (NR_155743, intron 3 of 4) 37199 NR_155745 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr10-6274 chr10 85658614 85658824 + 5.89 0.000 intron (NM_017551, intron 12 of 15) L2c|LINE|L2 80988 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr15-5035 chr15 83653443 83653653 + 5.89 0.000 promoter-TSS (NM_001301110) promoter-TSS (NM_001301110) -575 NM_001301110 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr3-9144 chr3 32153929 32154139 + 5.89 0.000 intron (NM_015141, intron 5 of 7) intron (NM_015141, intron 5 of 7) 47523 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chr4-6923 chr4 16065218 16065428 + 5.89 0.000 intron (NM_001371408, intron 2 of 24) intron (NM_001371408, intron 2 of 24) 10795 NM_001145851 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr8-6643 chr8 78645525 78645735 + 5.89 0.000 Intergenic Intergenic -20459 NM_016010 51101 Hs.271876 NM_016010 ENSG00000104427 ZC2HC1A C8orf70|CGI-62|FAM164A zinc finger C2HC-type containing 1A protein-coding chr2-13915 chr2 182356711 182356921 + 5.89 0.000 intron (NM_005019, intron 1 of 14) L1PA5|LINE|L1 70232 NM_001363871 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr12-3782 chr12 54071143 54071353 + 5.89 0.000 intron (NR_026655, intron 1 of 1) MIRb|SINE|MIR 10575 NR_026658 100240735 Hs.635297 NR_026658 ENSG00000250654 LOC100240735 - uncharacterized LOC100240735 ncRNA chr20-4020 chr20 36565792 36566002 + 5.89 0.000 intron (NR_109939, intron 2 of 4) AluJo|SINE|Alu 7378 NR_109939 101926987 Hs.647444 NR_109939 ENSG00000232907 DLGAP4-AS1 CCAT7 DLGAP4 antisense RNA 1 ncRNA chrX-3553 chrX 67131325 67131535 + 5.89 0.000 Intergenic Intergenic -412591 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chrX-2228 chrX 44182219 44182429 + 5.89 0.000 intron (NM_025184, intron 11 of 14) L1MB5|LINE|L1 161348 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr10-8666 chr10 100616069 100616279 + 5.89 0.000 Intergenic L2c|LINE|L2 80231 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr8-1626 chr8 64145937 64146147 + 5.89 0.000 intron (NR_125826, intron 3 of 4) MER72|LTR|ERV1 222516 NR_125826 102724623 Hs.586375 NR_125826 ENSG00000253554 LINC01414 - long intergenic non-protein coding RNA 1414 ncRNA chr18-1691 chr18 79800826 79801036 + 5.89 0.000 Intergenic Intergenic -62737 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr3-10827 chr3 164132040 164132250 + 5.89 0.000 Intergenic Intergenic 39411 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr18-3575 chr18 79454079 79454289 + 5.89 0.000 intron (NM_001278672, intron 6 of 8) intron (NM_001278672, intron 6 of 8) 53885 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr3-4133 chr3 119368384 119368594 + 5.89 0.000 exon (NM_020754, exon 3 of 12) exon (NM_020754, exon 3 of 12) -45729 NR_046748 100874246 Hs.607097 NR_046748 ENSG00000241155 ARHGAP31-AS1 - ARHGAP31 antisense RNA 1 ncRNA chr3-8531 chr3 141493351 141493561 + 5.89 0.000 intron (NM_006506, intron 1 of 23) MER5B|DNA|hAT-Charlie 6429 NM_001303245 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr13-2489 chr13 51940411 51940621 + 5.89 0.000 intron (NM_001005918, intron 12 of 16) AluSq2|SINE|Alu 70934 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chrX-3462 chrX 27856175 27856385 + 5.89 0.000 Intergenic Intergenic 48290 NM_182506 139422 Hs.447363 NM_182506 ENSG00000177689 MAGEB10 - MAGE family member B10 protein-coding chr21-1842 chr21 41564819 41565029 + 5.89 0.000 Intergenic Intergenic -56766 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr4-4383 chr4 41049483 41049693 + 5.89 0.000 intron (NM_001330658, intron 3 of 15) SVA_C|Retroposon|SVA 164954 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr11-4579 chr11 128679643 128679853 + 5.89 0.000 Intergenic (CTTT)n|Simple_repeat|Simple_repeat -6787 NM_001271012 2313 Hs.504281 NM_002017 ENSG00000151702 FLI1 BDPLT21|EWSR2|SIC-1 Fli-1 proto-oncogene, ETS transcription factor protein-coding chr9-8959 chr9 138043627 138043837 + 5.89 0.000 non-coding (NR_121582, exon 2 of 3) non-coding (NR_121582, exon 2 of 3) 1339 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chr2-6304 chr2 65111276 65111486 + 5.89 0.000 intron (NM_015543, intron 1 of 3) L1MD3|LINE|L1 18725 NM_004161 5861 Hs.310645 NM_004161 ENSG00000138069 RAB1A RAB1|YPT1 RAB1A, member RAS oncogene family protein-coding chr3-10364 chr3 128463816 128464026 + 5.89 0.000 non-coding (NR_037890, exon 2 of 3) non-coding (NR_037890, exon 2 of 3) 327 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr2-3892 chr2 43916849 43917059 + 5.89 0.000 intron (NM_133259, intron 29 of 37) AluJo|SINE|Alu 77983 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr6-3629 chr6 118460906 118461116 + 5.89 0.000 3' UTR (NM_001178035, exon 14 of 14) 3' UTR (NM_001178035, exon 14 of 14) -40362 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr9-5345 chr9 89429989 89430199 + 5.89 0.000 intron (NM_001371200, intron 2 of 20) intron (NM_001371200, intron 2 of 20) 49796 NR_163888 chr7-5985 chr7 102173866 102174076 + 5.89 0.000 intron (NM_001202546, intron 9 of 21) intron (NM_001202546, intron 9 of 21) -111170 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr9-8419 chr9 120946417 120946627 + 5.89 0.000 intron (NR_148450, intron 1 of 1) MER90a|LTR|ERV1 6309 NR_148450 110599590 NR_148450 C5-OT1 C5T1LNCRNA C5 3' UTR overlapping transcript 1 ncRNA chr2-12093 chr2 33636188 33636398 + 5.89 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -36931 NM_001304538 25940 Hs.468140 NM_015475 ENSG00000119812 FAM98A - family with sequence similarity 98 member A protein-coding chr18-3457 chr18 68879947 68880157 + 5.89 0.000 intron (NM_001093729, intron 7 of 9) LTR12C|LTR|ERV1 81972 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr5-7520 chr5 36798906 36799116 + 5.89 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 77683 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA chr20-4112 chr20 41412009 41412219 + 5.89 0.000 intron (NM_032221, intron 36 of 36) intron (NM_032221, intron 36 of 36) -45296 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr3-10734 chr3 155369345 155369555 + 5.89 0.000 Intergenic LTR49|LTR|ERV1 -75767 NM_001352129 100507537 Hs.518341 NM_001352129 ENSG00000240045 STRIT1 DWORF small transmembrane regulator of ion transport 1 protein-coding chr12-7657 chr12 83318367 83318577 + 5.89 0.000 Intergenic Intergenic 631317 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chrX-2302 chrX 53647479 53647689 + 5.89 0.000 intron (NM_031407, intron 5 of 83) intron (NM_031407, intron 5 of 83) 39135 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr1-12146 chr1 176216507 176216717 + 5.89 0.000 Intergenic Intergenic -9326 NM_022457 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr6-6416 chr6 86729378 86729588 + 5.89 0.000 Intergenic Intergenic -208045 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr1-16625 chr1 239386570 239386780 + 5.89 0.000 5' UTR (NM_001347716, exon 1 of 8) 5' UTR (NM_001347716, exon 1 of 8) 107 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr20-4422 chr20 60009322 60009532 + 5.89 0.000 intron (NM_021810, intron 5 of 5) intron (NM_021810, intron 5 of 5) 13053 NM_021810 60437 Hs.729046 NM_021810 ENSG00000124215 CDH26 VR20 cadherin 26 protein-coding chr10-8115 chr10 69579631 69579841 + 5.89 0.000 Intergenic Intergenic -6314 NM_020999 50674 Hs.532682 NM_020999 ENSG00000122859 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding chr10-7370 chr10 2083900 2084110 + 5.89 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -7916 NR_106720 102465944 NR_106720 ENSG00000278069 MIR6072 hsa-mir-6072 microRNA 6072 ncRNA chr22-4279 chr22 49466524 49466734 + 5.89 0.000 intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) 76837 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr3-11193 chr3 193539938 193540148 + 5.89 0.000 intron (NM_032279, intron 1 of 29) intron (NM_032279, intron 1 of 29) -13170 NR_121666 101929198 Hs.450092 NR_046726 ATP13A4-AS1 - ATP13A4 antisense RNA 1 ncRNA chr4-7831 chr4 101102460 101102670 + 5.89 0.000 intron (NM_001130691, intron 3 of 12) intron (NM_001130691, intron 3 of 12) 138307 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr4-8452 chr4 155322095 155322305 + 5.89 0.000 Intergenic Intergenic -32016 NR_125937 102724776 Hs.61271 NR_125937 ENSG00000250910 LOC102724776 - uncharacterized LOC102724776 ncRNA chr2-13437 chr2 143238771 143238981 + 5.89 0.000 intron (NM_018460, intron 5 of 13) L1PA11|LINE|L1 109457 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chrX-2819 chrX 135639559 135639769 + 5.89 0.000 Intergenic Intergenic 46430 NR_147090 644717 Hs.556140 NR_147090 SAGE2P - sarcoma antigen 2, pseudogene pseudo chr13-3277 chr13 43370255 43370465 + 5.89 0.000 intron (NM_001347966, intron 6 of 17) AluY|SINE|Alu -78492 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr12-5886 chr12 54075772 54075982 + 5.89 0.000 intron (NR_026655, intron 1 of 1) intron (NR_026655, intron 1 of 1) 5946 NR_026658 100240735 Hs.635297 NR_026658 ENSG00000250654 LOC100240735 - uncharacterized LOC100240735 ncRNA chr11-8491 chr11 119864775 119864985 + 5.89 0.000 Intergenic Intergenic 135297 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr1-7673 chr1 18000366 18000576 + 5.89 0.000 Intergenic MIR3|SINE|MIR -65186 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr16-4339 chr16 31084526 31084736 + 5.89 0.000 TTS (NM_014699) TTS (NM_014699) 4178 NM_001039503 339105 Hs.569575 NM_001039503 ENSG00000151006 PRSS53 POL3S|UNQ308 serine protease 53 protein-coding chr12-3916 chr12 129747580 129747790 + 5.89 0.000 intron (NM_133448, intron 1 of 8) (CA)n|Simple_repeat|Simple_repeat 156340 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr2-12389 chr2 54239445 54239655 + 5.89 0.000 intron (NM_138448, intron 3 of 3) intron (NM_138448, intron 3 of 3) 16679 NM_001003937 388951 Hs.620508 NM_001003937 ENSG00000178021 TSPYL6 - TSPY like 6 protein-coding chr7-3518 chr7 5685105 5685315 + 5.89 0.000 intron (NM_207111, intron 13 of 16) intron (NM_207111, intron 13 of 16) -4749 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr5-7806 chr5 65986643 65986853 + 5.89 0.000 intron (NM_001253697, intron 1 of 25) MLT1L|LTR|ERVL-MaLR -41175 NR_028474 100303749 Hs.608060 NR_028474 LOC100303749 - LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene pseudo chr1-16607 chr1 238298536 238298746 + 5.89 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 187376 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr3-7619 chr3 19543350 19543560 + 5.89 0.000 Intergenic LTR41C|LTR|ERVL -228524 NR_039954 100616291 NR_039954 ENSG00000271898 MIR4791 mir-4791 microRNA 4791 ncRNA chr2-13128 chr2 116836154 116836364 + 5.89 0.000 Intergenic Intergenic -978432 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chrX-3612 chrX 85051711 85051921 + 5.89 0.000 intron (NM_198450, intron 3 of 8) MLT1H1|LTR|ERVL-MaLR 47939 NM_198450 139322 Hs.512181 NM_198450 ENSG00000155008 APOOL CXorf33|FAM121A|MICOS27|Mic27|UNQ8193 apolipoprotein O like protein-coding chr14-3020 chr14 54841703 54841913 + 5.89 0.000 TTS (NM_001024070) TTS (NM_001024070) 36385 NR_036194 100422984 NR_036194 ENSG00000265432 MIR4308 - microRNA 4308 ncRNA chr1-9921 chr1 75072972 75073182 + 5.89 0.000 Intergenic L1ME3Cz|LINE|L1 -55357 NM_001001933 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr16-6721 chr16 72645708 72645918 + 5.89 0.000 intron (NR_159372, intron 1 of 7) L1ME2|LINE|L1 19157 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr2-14736 chr2 239122499 239122709 + 5.89 0.000 intron (NM_006037, intron 12 of 26) intron (NM_006037, intron 12 of 26) -36678 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr5-6445 chr5 163413160 163413370 + 5.89 0.000 Intergenic Intergenic -24306 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr18-1708 chr18 2327077 2327287 + 5.89 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 244323 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr5-6455 chr5 169052373 169052583 + 5.89 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 39251 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr1-14923 chr1 85148415 85148625 + 5.89 0.000 Intergenic Intergenic 14726 NR_039619 100616481 NR_039619 ENSG00000266110 MIR4423 mir-4423 microRNA 4423 ncRNA chr3-10207 chr3 121055831 121056041 + 5.89 0.000 intron (NR_145517, intron 5 of 8) AluJo|SINE|Alu 6296 NR_049861 100847043 NR_049861 ENSG00000264477 MIR5682 - microRNA 5682 ncRNA chr19-3353 chr19 10528328 10528538 + 5.89 0.000 Intergenic AluJo|SINE|Alu -10468 NM_001166215 53637 Hs.501561 NM_030760 ENSG00000180739 S1PR5 EDG8|Edg-8|S1P5|SPPR-1|SPPR-2 sphingosine-1-phosphate receptor 5 protein-coding chr2-8591 chr2 138701326 138701536 + 5.89 0.000 intron (NM_007226, intron 1 of 1) intron (NM_007226, intron 1 of 1) 78959 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chr1-11148 chr1 236159747 236159957 + 5.89 0.000 intron (NM_003272, intron 1 of 6) intron (NM_003272, intron 1 of 6) 17313 NM_003272 7107 Hs.498160 NM_003272 ENSG00000077585 GPR137B TM7SF1 G protein-coupled receptor 137B protein-coding chr15-3622 chr15 75171513 75171723 + 5.89 0.000 Intergenic Intergenic -30264 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr1-14337 chr1 40316736 40316946 + 5.89 0.000 intron (NM_001852, intron 1 of 31) CpG 445 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr22-4008 chr22 39658273 39658483 + 5.89 0.000 intron (NM_001003406, intron 10 of 35) intron (NM_001003406, intron 10 of 35) 87625 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr6-8449 chr6 153765713 153765923 + 5.89 0.000 Intergenic Intergenic -244678 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr11-7828 chr11 111611072 111611282 + 5.89 0.000 intron (NM_015191, intron 1 of 14) AluJb|SINE|Alu 8728 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr13-3663 chr13 33185970 33186180 + 5.89 0.000 promoter-TSS (NM_001243466) promoter-TSS (NM_001243466) 16 NM_001243466 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr6-7699 chr6 86881865 86882075 + 5.89 0.000 Intergenic L1PA8|LINE|L1 -55558 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr3-7847 chr3 114792780 114792990 + 5.89 0.000 intron (NM_001164343, intron 4 of 11) AluSx1|SINE|Alu -33778 NM_001164345 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr13-3162 chr13 102199242 102199452 + 5.89 0.000 intron (NM_001321944, intron 1 of 5) intron (NM_001321944, intron 1 of 5) 111339 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr18-3202 chr18 46355128 46355338 + 5.89 0.000 intron (NM_001256758, intron 1 of 5) AluSx|SINE|Alu 21009 NR_046357 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr12-5966 chr12 87420522 87420732 + 5.89 0.000 Intergenic L1PA7|LINE|L1 89888 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr3-4139 chr3 121998753 121998963 + 5.89 0.000 intron (NM_001199800, intron 3 of 5) MIRb|SINE|MIR 23389 NM_001199800 286676 Hs.98484 NM_175924 ENSG00000145103 ILDR1 DFNB42|ILDR1alpha|ILDR1alpha'|ILDR1beta immunoglobulin like domain containing receptor 1 protein-coding chr13-2791 chr13 101110272 101110482 + 5.89 0.000 intron (NM_001350749, intron 20 of 43) intron (NM_001350749, intron 20 of 43) -166013 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chrX-3957 chrX 11735029 11735239 + 5.89 0.000 Intergenic MER117|DNA|hAT-Charlie -23025 NM_078628 10943 Hs.655288 NM_006800 ENSG00000005302 MSL3 MSL3L1 MSL complex subunit 3 protein-coding chr6-7916 chr6 109395448 109395658 + 5.89 0.000 intron (NM_001286361, intron 5 of 5) MER3|DNA|hAT-Charlie -12741 NM_001142404 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr4-5870 chr4 123538868 123539078 + 5.89 0.000 Intergenic LTR12C|LTR|ERV1 -111018 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr15-4509 chr15 52225680 52225890 + 5.89 0.000 intron (NM_018728, intron 25 of 40) AluSq2|SINE|Alu -34393 NM_016194 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr19-6659 chr19 33731574 33731784 + 5.89 0.000 intron (NM_001127895, intron 3 of 4) MER41B|LTR|ERV1 47151 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr16-6371 chr16 51900362 51900572 + 5.89 0.000 Intergenic Intergenic 137948 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr4-6774 chr4 6797967 6798177 + 5.89 0.000 intron (NM_001100590, intron 1 of 8) AluYc|SINE|Alu 15340 NM_001100590 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr12-6472 chr12 99358601 99358811 + 5.89 0.000 intron (NM_152788, intron 12 of 25) (CA)n|Simple_repeat|Simple_repeat -203616 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr20-3906 chr20 32255410 32255620 + 5.89 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 17720 NR_031726 100302183 NR_031726 ENSG00000284125 MIR1825 MIRN1825|hsa-mir-1825 microRNA 1825 ncRNA chr7-6134 chr7 123442461 123442671 + 5.89 0.000 Intergenic L1MB1|LINE|L1 90382 NM_001282855 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr17-6442 chr17 8753619 8753829 + 5.89 0.000 intron (NM_001128076, intron 4 of 6) AluSz6|SINE|Alu 4822 NM_001128076 388333 Hs.230205 NM_001128076 ENSG00000183318 SPDYE4 - speedy/RINGO cell cycle regulator family member E4 protein-coding chr3-6891 chr3 155862676 155862886 + 5.89 0.000 Intergenic LTR8|LTR|ERV1 -7869 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr2-7576 chr2 25154548 25154758 + 5.89 0.000 3' UTR (NM_001319099, exon 23 of 23) 3' UTR (NM_001319099, exon 23 of 23) 13927 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr21-1685 chr21 28780038 28780248 + 5.89 0.000 Intergenic Intergenic 105224 NM_013240 29104 Hs.163846 NM_013240 ENSG00000156239 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P N-6 adenine-specific DNA methyltransferase 1 protein-coding chr4-4390 chr4 41426933 41427143 + 5.89 0.000 intron (NM_001289122, intron 1 of 25) intron (NM_001289122, intron 1 of 25) 66231 NM_001330784 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr17-6909 chr17 34808780 34808990 + 5.89 0.000 Intergenic AluY|SINE|Alu 152575 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr5-5129 chr5 103584928 103585138 + 5.89 0.000 Intergenic MIRb|SINE|MIR -22244 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr20-4418 chr20 59815003 59815213 + 5.89 0.000 intron (NM_080672, intron 8 of 12) intron (NM_080672, intron 8 of 12) 93898 NM_183244 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr2-7938 chr2 60612211 60612421 + 5.89 0.000 Intergenic L2c|LINE|L2 -58662 NM_022893 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr12-6785 chr12 9628691 9628901 + 5.89 0.000 intron (NR_046450, intron 1 of 4) L1PA5|LINE|L1 -4623 NR_046448 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2 member D pseudogene pseudo chr16-6055 chr16 10901856 10902066 + 5.89 0.000 intron (NM_001286403, intron 6 of 17) intron (NM_001286403, intron 6 of 17) 24759 NM_001286403 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding chr3-10071 chr3 108244910 108245120 + 5.89 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -22591 NM_018010 55081 Hs.412196 NM_018010 ENSG00000114446 IFT57 ESRRBL1|HIPPI|MHS4R2|OFD18 intraflagellar transport 57 protein-coding chr9-7580 chr9 36143284 36143494 + 5.89 0.000 intron (NR_104637, intron 2 of 6) intron (NR_104637, intron 2 of 6) 6604 NM_001287013 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr2-13799 chr2 174059900 174060110 + 5.89 0.000 Intergenic Intergenic 34725 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr19-6676 chr19 35144170 35144380 + 5.89 0.000 intron (NM_022006, intron 1 of 5) intron (NM_022006, intron 1 of 5) 1020 NM_022006 53822 Hs.134729 NM_022006 ENSG00000221946 FXYD7 - FXYD domain containing ion transport regulator 7 protein-coding chr12-6191 chr12 20319285 20319495 + 5.89 0.000 Intergenic L2|LINE|L2 -49855 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr11-4928 chr11 65164461 65164671 + 5.89 0.000 Intergenic Intergenic -5588 NM_001008778 387778 Hs.450642 NM_001008778 ENSG00000204710 SPDYC RINGOC|Ringo2 speedy/RINGO cell cycle regulator family member C protein-coding chr2-11785 chr2 15323281 15323491 + 5.89 0.000 intron (NR_052013, intron 38 of 50) intron (NR_052013, intron 38 of 50) 237948 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr1-13233 chr1 216409956 216410166 + 5.89 0.000 intron (NM_206933, intron 3 of 71) L1PREC2|LINE|L1 13335 NM_007123 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr14-4183 chr14 84616901 84617111 + 5.89 0.000 Intergenic Intergenic -654926 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr5-9149 chr5 176809226 176809436 + 5.89 0.000 Intergenic Charlie8|DNA|hAT-Charlie -1228 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 netrin receptor A protein-coding chr12-5811 chr12 24864854 24865064 + 5.89 0.000 intron (NM_001178091, intron 4 of 9) L2b|LINE|L2 37263 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr22-3444 chr22 41132152 41132362 + 5.89 0.000 intron (NM_001429, intron 6 of 30) intron (NM_001429, intron 6 of 30) 39665 NM_001362843 2033 Hs.517517 NM_001429 ENSG00000100393 EP300 KAT3B|MKHK2|RSTS2|p300 E1A binding protein p300 protein-coding chr20-3546 chr20 1943248 1943458 + 5.89 0.000 Intergenic Intergenic -3857 NR_134520 727993 Hs.551466 NR_134520 ENSG00000233896 PDYN-AS1 - PDYN antisense RNA 1 ncRNA chr19-6175 chr19 4995566 4995776 + 5.89 0.000 intron (NM_001370094, intron 1 of 10) intron (NM_001370094, intron 1 of 10) 26558 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr1-15488 chr1 155393179 155393389 + 5.89 0.000 intron (NM_001366177, intron 7 of 27) intron (NM_001366177, intron 7 of 27) -39896 NR_034180 645682 Hs.632482 NR_034180 ENSG00000237872 POU5F1P4 OCT3|OCT4|OTF-3|OTF3|Oct-3|Oct-4|Oct4-pg4|POU5F1|POU5FLC1 POU class 5 homeobox 1 pseudogene 4 pseudo chr7-6169 chr7 128247047 128247257 + 5.89 0.000 intron (NM_000230, intron 1 of 2) intron (NM_000230, intron 1 of 2) 5874 NM_000230 3952 Hs.194236 NM_000230 ENSG00000174697 LEP LEPD|OB|OBS leptin protein-coding chr17-6907 chr17 34751046 34751256 + 5.89 0.000 Intergenic Intergenic 170402 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr1-15304 chr1 117540397 117540607 + 5.89 0.000 Intergenic Intergenic 65268 NR_121626 100996263 Hs.202533 NR_121626 ENSG00000236866 LOC100996263 - uncharacterized LOC100996263 ncRNA chr22-3435 chr22 39763238 39763448 + 5.89 0.000 intron (NM_152512, intron 6 of 6) L1MEg|LINE|L1 130417 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr10-8218 chr10 73120507 73120717 + 5.89 0.000 intron (NM_001283015, intron 3 of 7) intron (NM_001283015, intron 3 of 7) 5595 NR_145776 109617000 NR_145776 ENSG00000221164 SNORA11F - small nucleolar RNA, H/ACA box 11F snoRNA chr3-7258 chr3 196202692 196202902 + 5.89 0.000 intron (NR_135617, intron 5 of 8) L2|LINE|L2 8603 NR_135617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr4-8232 chr4 138786810 138787020 + 5.89 0.000 Intergenic Intergenic 225731 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr7-7838 chr7 4490528 4490738 + 5.89 0.000 Intergenic L2c|LINE|L2 -191662 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr1-15228 chr1 111827034 111827244 + 5.89 0.000 intron (NM_172198, intron 2 of 6) MIR|SINE|MIR 29766 NR_046783 100874295 Hs.738190 NR_046783 ENSG00000232558 KCND3-IT1 - KCND3 intronic transcript 1 ncRNA chr10-8407 chr10 84187901 84188111 + 5.89 0.000 Intergenic Intergenic -6531 NM_033100 92211 Hs.137556 NM_033100 ENSG00000148600 CDHR1 CORD15|PCDH21|PRCAD|RP65 cadherin related family member 1 protein-coding chr14-4911 chr14 73311449 73311659 + 5.89 0.000 intron (NM_001005745, intron 5 of 10) intron (NM_001005745, intron 5 of 10) -65553 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr10-7290 chr10 130867060 130867270 + 5.89 0.000 Intergenic Intergenic 95503 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr4-8430 chr4 153704725 153704935 + 5.89 0.000 exon (NM_001318796, exon 3 of 3) exon (NM_001318796, exon 3 of 3) 20550 NM_001318791 7097 Hs.519033 NM_003264 ENSG00000137462 TLR2 CD282|TIL4 toll like receptor 2 protein-coding chr10-6519 chr10 66087648 66087858 + 5.89 0.000 intron (NM_001127384, intron 14 of 17) intron (NM_001127384, intron 14 of 17) 516328 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr1-8230 chr1 27941881 27942091 + 5.89 0.000 intron (NM_001009568, intron 1 of 6) intron (NM_001009568, intron 1 of 6) 6986 NM_001304579 27293 Hs.123659 NM_014474 ENSG00000130768 SMPDL3B ASML3B sphingomyelin phosphodiesterase acid like 3B protein-coding chr2-6260 chr2 45169477 45169687 + 5.89 0.000 Intergenic CpG 85359 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr7-3410 chr7 134213044 134213254 + 5.89 0.000 TTS (NM_001365701) TTS (NM_001365701) 85809 NM_001365701 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr20-2036 chr20 667912 668122 + 5.89 0.000 intron (NM_033129, intron 1 of 1) intron (NM_033129, intron 1 of 1) 7785 NM_033129 85508 Hs.355284 NM_033129 ENSG00000215397 SCRT2 ZNF898B scratch family transcriptional repressor 2 protein-coding chr12-3780 chr12 53794264 53794474 + 5.89 0.000 Intergenic Intergenic -37335 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr6-7268 chr6 43006776 43006986 + 5.89 0.000 intron (NM_001270476, intron 3 of 15) intron (NM_001270476, intron 3 of 15) 7065 NM_014623 4201 Hs.278362 NM_014623 ENSG00000124733 MEA1 HYS|MEA male-enhanced antigen 1 protein-coding chr21-1637 chr21 22719457 22719667 + 5.89 0.000 Intergenic MER21-int|LTR|ERVL -359722 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA chr2-12340 chr2 48903779 48903989 + 5.89 0.000 Intergenic Intergenic -148160 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr9-6419 chr9 69513504 69513714 + 5.89 0.000 intron (NM_001163, intron 2 of 12) intron (NM_001163, intron 2 of 12) 158762 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr6-5582 chr6 34120397 34120607 + 5.89 0.000 intron (NM_001256809, intron 1 of 8) intron (NM_001256809, intron 1 of 8) -9739 NM_001256812 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr6-3559 chr6 53315805 53316015 + 5.89 0.000 intron (NM_001242830, intron 1 of 6) intron (NM_001242830, intron 1 of 6) 21707 NR_046241 647190 Hs.520189 NR_046241 RPS16P5 RPS16_3_702 ribosomal protein S16 pseudogene 5 pseudo chrX-4008 chrX 16521797 16522007 + 5.89 0.000 Intergenic L1M1|LINE|L1 105183 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr14-3566 chr14 105326550 105326760 + 5.89 0.000 intron (NM_015197, intron 1 of 23) intron (NM_015197, intron 1 of 23) -11078 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chrX-2744 chrX 127812501 127812711 + 5.89 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 239797 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr2-12500 chr2 63432643 63432853 + 5.89 0.000 intron (NR_148704, intron 10 of 18) MIR3|SINE|MIR 5259 NR_122106 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr7-8818 chr7 83946415 83946625 + 5.89 0.000 Intergenic AluY|SINE|Alu 248269 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chrX-3654 chrX 100226615 100226825 + 5.89 0.000 Intergenic Intergenic 183553 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr3-6014 chr3 49039355 49039565 + 5.89 0.000 intron (NM_017730, intron 7 of 10) AluSx1|SINE|Alu -10062 NM_000884 3615 Hs.654400 NM_000884 ENSG00000178035 IMPDH2 IMPD2|IMPDH-II inosine monophosphate dehydrogenase 2 protein-coding chr6-6991 chr6 20223070 20223280 + 5.89 0.000 Intergenic Charlie2a|DNA|hAT-Charlie -10706 NR_073465 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr7-8829 chr7 85630934 85631144 + 5.89 0.000 Intergenic Intergenic 209917 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr3-9443 chr3 49158952 49159162 + 5.89 0.000 Intergenic Intergenic -4656 NR_004405 22973 Hs.607092 NR_004405 LAMB2P1 LAMB2L laminin subunit beta 2 pseudogene 1 pseudo chr9-7310 chr9 10362261 10362471 + 5.89 0.000 intron (NM_002839, intron 2 of 45) MIR|SINE|MIR 250636 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr5-6952 chr5 140385127 140385337 + 5.89 0.000 Intergenic AluJb|SINE|Alu -16582 NM_020690 404734 Hs.594084 NM_020690 ENSG00000254996 ANKHD1-EIF4EBP3 MASK-BP3|MASK-BP3ARF ANKHD1-EIF4EBP3 readthrough protein-coding chr6-4643 chr6 48242204 48242414 + 5.89 0.000 Intergenic Intergenic -173620 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr21-1539 chr21 46109080 46109290 + 5.89 0.000 intron (NM_058174, intron 1 of 27) MER52D|LTR|ERV1 11066 NM_058175 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr2-11761 chr2 11723384 11723594 + 5.89 0.000 promoter-TSS (NM_001261427) promoter-TSS (NM_001261427) -826 NM_001261427 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr3-4807 chr3 129010891 129011101 + 5.89 0.000 intron (NM_024768, intron 2 of 7) MIRb|SINE|MIR -6994 NM_001348521 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr4-4673 chr4 85295962 85296172 + 5.89 0.000 Intergenic MER8|DNA|TcMar-Tigger -179083 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr2-11597 chr2 2232642 2232852 + 5.89 0.000 intron (NM_015025, intron 2 of 24) intron (NM_015025, intron 2 of 24) -86485 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr3-8283 chr3 54548870 54549080 + 5.89 0.000 intron (NM_018398, intron 5 of 37) intron (NM_018398, intron 5 of 37) 90882 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr11-2814 chr11 120319338 120319548 + 5.89 0.000 3' UTR (NM_014352, exon 13 of 13) 3' UTR (NM_014352, exon 13 of 13) -5856 NM_001198673 219902 Hs.643516 NM_174926 ENSG00000181264 TLCD5 TMEM136 TLC domain containing 5 protein-coding chr6-7542 chr6 70044528 70044738 + 5.89 0.000 intron (NM_001858, intron 14 of 50) Tigger1|DNA|TcMar-Tigger 178077 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr6-5424 chr6 156901605 156901815 + 5.89 0.000 intron (NM_020732, intron 4 of 19) intron (NM_020732, intron 4 of 19) -121979 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr5-5902 chr5 38167585 38167795 + 5.89 0.000 intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) 19210 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA chr11-10207 chr11 97004679 97004889 + 5.89 0.000 Intergenic ERVL-E-int|LTR|ERVL 496359 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr13-2396 chr13 42405461 42405671 + 5.89 0.000 Intergenic Intergenic -19326 NR_135319 105370177 NR_135319 ENSG00000283554 LINC02341 - long intergenic non-protein coding RNA 2341 ncRNA chr5-4666 chr5 37552491 37552701 + 5.89 0.000 intron (NM_001345998, intron 9 of 17) intron (NM_001345998, intron 9 of 17) 173278 NM_001345999 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr12-5012 chr12 82349822 82350032 + 5.89 0.000 Intergenic Intergenic 8460 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr17-8005 chr17 49601770 49601980 + 5.89 0.000 exon (NM_001007228, exon 9 of 10) exon (NM_001007228, exon 9 of 10) 24714 NM_001370732 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding KI270736.1-20 KI270736.1 81204 81414 + 5.89 0.000 NA NA NA NA chr14-5028 chr14 79167871 79168081 + 5.89 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -32006 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr16-5203 chr16 12921480 12921690 + 5.89 0.000 intron (NM_001145204, intron 2 of 4) AluJr|SINE|Alu 19987 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr11-10458 chr11 117509454 117509664 + 5.89 0.000 intron (NM_020693, intron 8 of 32) intron (NM_020693, intron 8 of 32) 181705 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr4-5218 chr4 167014094 167014304 + 5.89 0.000 intron (NM_001204354, intron 2 of 9) intron (NM_001204354, intron 2 of 9) 220227 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr18-1286 chr18 60834748 60834958 + 5.89 0.000 Intergenic Intergenic -462078 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr16-3374 chr16 57521622 57521832 + 5.89 0.000 intron (NM_033212, intron 3 of 8) intron (NM_033212, intron 3 of 8) 14844 NM_033212 92922 Hs.644611 NM_033212 ENSG00000135736 CCDC102A - coiled-coil domain containing 102A protein-coding chr9-7578 chr9 35964177 35964387 + 5.89 0.000 Intergenic L1ME4b|LINE|L1 -6128 NM_019897 56656 Hs.553540 NM_019897 ENSG00000278889 OR2S2 OR37A|OST715 olfactory receptor family 2 subfamily S member 2 (gene/pseudogene) protein-coding chr13-3733 chr13 40968766 40968976 + 5.89 0.000 intron (NM_001370329, intron 2 of 9) AluJb|SINE|Alu 13411 NM_001145353 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr16-5486 chr16 7294578 7294788 + 5.89 0.000 intron (NM_018723, intron 4 of 15) intron (NM_018723, intron 4 of 15) -38162 NM_145892 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr11-9669 chr11 67247366 67247576 + 5.89 0.000 intron (NR_027473, intron 15 of 20) AluSz|SINE|Alu 7457 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr3-8833 chr3 8785135 8785345 + 5.89 0.000 Intergenic Intergenic -15626 NM_001354653 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr1-14480 chr1 48089569 48089779 + 5.89 0.000 Intergenic Intergenic -92289 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr14-4499 chr14 37572421 37572631 + 5.89 0.000 Intergenic AluSz6|SINE|Alu 22723 NM_004496 3169 Hs.163484 NM_004496 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding chr7-6149 chr7 124782800 124783010 + 5.89 0.000 intron (NM_001024603, intron 2 of 3) MSTA|LTR|ERVL-MaLR 7905 NM_001024603 154872 Hs.444163 NM_001024603 ENSG00000275356 C7orf77 - chromosome 7 open reading frame 77 protein-coding chr20-2688 chr20 46357394 46357604 + 5.89 0.000 intron (NM_173073, intron 3 of 9) intron (NM_173073, intron 3 of 9) 6926 NM_015945 51006 Hs.593344 NM_015945 ENSG00000080189 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 member C2 protein-coding chr7-2985 chr7 8152618 8152828 + 5.89 0.000 intron (NM_001350838, intron 6 of 11) (CAC)n|Simple_repeat|Simple_repeat 109329 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr16-4694 chr16 81260122 81260332 + 5.89 0.000 intron (NM_017429, intron 3 of 10) L1ME4b|LINE|L1 21538 NM_017429 53630 Hs.212172 NM_017429 ENSG00000135697 BCO1 BCDO|BCDO1|BCMO|BCMO1|BCO beta-carotene oxygenase 1 protein-coding chr8-6952 chr8 105430708 105430918 + 5.89 0.000 intron (NM_001362837, intron 2 of 7) intron (NM_001362837, intron 2 of 7) 111270 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr7-7834 chr7 4267681 4267891 + 5.89 0.000 3' UTR (NM_152744, exon 45 of 45) 3' UTR (NM_152744, exon 45 of 45) -132949 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr14-3871 chr14 89392319 89392529 + 5.89 0.000 intron (NM_001085471, intron 2 of 6) MLT1C|LTR|ERVL-MaLR 24809 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr4-7716 chr4 89581718 89581928 + 5.89 0.000 Intergenic MLT2A2|LTR|ERVL -254578 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr6-5525 chr6 167108696 167108906 + 5.89 0.000 Intergenic Intergenic -3006 NM_004367 1235 Hs.46468 NM_004367 ENSG00000112486 CCR6 BN-1|C-C CKR-6|CC-CKR-6|CCR-6|CD196|CKR-L3|CKRL3|CMKBR6|DCR2|DRY6|GPR29|GPRCY4|STRL22 C-C motif chemokine receptor 6 protein-coding chr14-3378 chr14 92839217 92839427 + 5.89 0.000 intron (NM_005113, intron 12 of 12) intron (NM_005113, intron 12 of 12) 45017 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr13-1315 chr13 110678153 110678363 + 5.89 0.000 intron (NM_024537, intron 6 of 14) intron (NM_024537, intron 6 of 14) 27858 NM_024537 79587 Hs.508725 NM_024537 ENSG00000134905 CARS2 COXPD27|cysRS cysteinyl-tRNA synthetase 2, mitochondrial protein-coding chr17-4406 chr17 34039041 34039251 + 5.89 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 117660 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr2-14328 chr2 218023109 218023319 + 5.89 0.000 Intergenic Intergenic -11720 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr1-12887 chr1 110503838 110504048 + 5.89 0.000 Intergenic Intergenic -13685 NR_108042 440602 Hs.708945 NR_108042 ENSG00000235407 CYMP-AS1 - CYMP antisense RNA 1 ncRNA chr5-6907 chr5 133639402 133639612 + 5.89 0.000 Intergenic Intergenic -26966 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr12-6392 chr12 71330150 71330360 + 5.89 0.000 Intergenic L2|LINE|L2 -109543 NM_001277226 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding chr1-13253 chr1 221040005 221040215 + 5.89 0.000 Intergenic Intergenic -159970 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr2-10060 chr2 38918847 38919057 + 5.89 0.000 promoter-TSS (NM_001367623) promoter-TSS (NM_001367623) -411 NM_001367623 100271715 Hs.99841 NM_001145451 ENSG00000214694 ARHGEF33 - Rho guanine nucleotide exchange factor 33 protein-coding chr4-6642 chr4 1947142 1947352 + 5.89 0.000 3' UTR (NM_133334, exon 9 of 9) 3' UTR (NM_133334, exon 9 of 9) -27389 NR_003004 677770 Hs.676951 NR_003004 ENSG00000249784 SCARNA22 ACA11 small Cajal body-specific RNA 22 ncRNA chr4-7861 chr4 103106213 103106423 + 5.89 0.000 intron (NM_001813, intron 48 of 48) intron (NM_001813, intron 48 of 48) -6484 NM_020139 56898 Hs.124696 NM_020139 ENSG00000164039 BDH2 DHRS6|EFA6R|PRO20933|SDR15C1|UCPA-OR|UNQ6308 3-hydroxybutyrate dehydrogenase 2 protein-coding chr5-7518 chr5 36614778 36614988 + 5.89 0.000 intron (NM_001289939, intron 2 of 8) intron (NM_001289939, intron 2 of 8) 8277 NM_001166695 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr14-5196 chr14 95002952 95003162 + 5.89 0.000 Intergenic Intergenic 130446 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr1-12953 chr1 152035027 152035237 + 5.89 0.000 intron (NM_005620, intron 1 of 2) intron (NM_005620, intron 1 of 2) 1872 NM_005620 6282 Hs.417004 NM_005620 ENSG00000163191 S100A11 HEL-S-43|MLN70|S100C S100 calcium binding protein A11 protein-coding chr13-3446 chr13 107712429 107712639 + 5.89 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 122924 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA chr6-1665 chr6 158869494 158869704 + 5.89 0.000 promoter-TSS (NR_160977) promoter-TSS (NR_160977) -215 NR_160977 100130967 Hs.32804 NM_001195032 C6orf99 - chromosome 6 open reading frame 99 ncRNA chr7-4094 chr7 32846752 32846962 + 5.89 0.000 Intergenic Intergenic 20555 NR_132360 102724668 Hs.636806 NR_132360 DPY19L1P2 THC1072510 DPY19L1 pseudogene 2 pseudo chr2-9952 chr2 1816354 1816564 + 5.89 0.000 intron (NM_015025, intron 21 of 24) intron (NM_015025, intron 21 of 24) -71944 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr11-4419 chr11 86990578 86990788 + 5.89 0.000 intron (NR_038905, intron 2 of 2) MER5A|DNA|hAT-Charlie 35062 NR_038905 100506368 Hs.559920 NR_038905 ENSG00000246523 FZD4-DT - FZD4 divergent transcript ncRNA chr20-3544 chr20 1769430 1769640 + 5.89 0.000 Intergenic Intergenic 10211 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr8-5755 chr8 141016626 141016836 + 5.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR -14652 NM_001352699 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr11-9158 chr11 34751382 34751592 + 5.89 0.000 Intergenic Intergenic 118921 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr6-7677 chr6 85537572 85537782 + 5.89 0.000 intron (NM_001350541, intron 15 of 26) AluSx1|SINE|Alu 56181 NM_153816 57231 Hs.485871 NM_020468 ENSG00000135317 SNX14 RGS-PX2|SCAR20 sorting nexin 14 protein-coding chr3-9971 chr3 96515297 96515507 + 5.89 0.000 Intergenic L1MA1|LINE|L1 155438 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chr13-1820 chr13 60019386 60019596 + 5.89 0.000 intron (NM_001258369, intron 5 of 26) intron (NM_001258369, intron 5 of 26) 6188 NR_051994 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr20-2315 chr20 8011515 8011725 + 5.89 0.000 intron (NM_021156, intron 1 of 7) intron (NM_021156, intron 1 of 7) 8141 NM_021156 56255 Hs.169358 NM_021156 ENSG00000125827 TMX4 DJ971N18.2|PDIA14|TXNDC13 thioredoxin related transmembrane protein 4 protein-coding chr10-7501 chr10 12603811 12604021 + 5.89 0.000 intron (NM_001351032, intron 4 of 11) intron (NM_001351032, intron 4 of 11) 25163 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 - microRNA 4480 ncRNA chr5-4226 chr5 129433663 129433873 + 5.89 0.000 Intergenic Intergenic -26530 NM_133638 171019 Hs.23751 NM_133638 ENSG00000145808 ADAMTS19 - ADAM metallopeptidase with thrombospondin type 1 motif 19 protein-coding chr8-3510 chr8 114456511 114456721 + 5.89 0.000 Intergenic ERVL-E-int|LTR|ERVL -1019677 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr5-8471 chr5 132179398 132179608 + 5.89 0.000 Intergenic LTR51|LTR|ERV1 -5373 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA chr12-5297 chr12 111233154 111233364 + 5.89 0.000 intron (NM_015267, intron 3 of 21) intron (NM_015267, intron 3 of 21) -70883 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr2-10875 chr2 65442485 65442695 + 5.89 0.000 Intergenic Intergenic -9991 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr1-13159 chr1 202740195 202740405 + 5.89 0.000 intron (NM_001314042, intron 21 of 27) SVA_D|Retroposon|SVA -29846 NM_177402 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr7-7549 chr7 114819792 114820002 + 5.89 0.000 Intergenic Intergenic -102257 NM_001166345 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chr4-3554 chr4 183344751 183344961 + 5.89 0.000 Intergenic Intergenic -22430 NM_001185149 100132463 Hs.727475 NM_001185149 ENSG00000185758 CLDN24 CLDN21 claudin 24 protein-coding chr21-1363 chr21 38244528 38244738 + 5.89 0.000 intron (NM_001276438, intron 1 of 2) intron (NM_001276438, intron 1 of 2) -12065 NM_001276435 3772 Hs.411299 NM_002243 ENSG00000157551 KCNJ15 IRKK|KIR1.3|KIR4.2 potassium voltage-gated channel subfamily J member 15 protein-coding chr19-6100 chr19 3586799 3587009 + 5.89 0.000 exon (NM_133261, exon 3 of 6) exon (NM_133261, exon 3 of 6) 1426 NM_133261 126326 Hs.266873 NM_133261 ENSG00000179855 GIPC3 C19orf64|DFNB15|DFNB72|DFNB95 GIPC PDZ domain containing family member 3 protein-coding chrX-2143 chrX 34610147 34610357 + 5.89 0.000 Intergenic MIRc|SINE|MIR 47033 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr11-5625 chr11 119256580 119256790 + 5.89 0.000 intron (NM_005188, intron 2 of 15) L1PB3|LINE|L1 50409 NM_005188 867 Hs.504096 NM_005188 ENSG00000110395 CBL C-CBL|CBL2|FRA11B|NSLL|RNF55 Cbl proto-oncogene protein-coding chr15-5297 chr15 101306140 101306350 + 5.89 0.000 intron (NM_002570, intron 21 of 21) intron (NM_002570, intron 21 of 21) 3059 NR_045387 100507472 Hs.498494 NR_045387 LOC100507472 - uncharacterized LOC100507472 ncRNA chr8-6967 chr8 106892487 106892697 + 5.89 0.000 Intergenic Intergenic -122348 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr18-3052 chr18 29190191 29190401 + 5.89 0.000 Intergenic Intergenic -1013166 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr10-6471 chr10 36809121 36809331 + 5.89 0.000 Intergenic L2|LINE|L2 -316631 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr8-5599 chr8 93511160 93511370 + 5.89 0.000 intron (NR_033858, intron 7 of 10) intron (NR_033858, intron 7 of 10) 189168 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr2-5653 chr2 197125110 197125320 + 5.89 0.000 intron (NM_153697, intron 6 of 9) intron (NM_153697, intron 6 of 9) -72776 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr2-13905 chr2 181528220 181528430 + 5.89 0.000 intron (NM_000885, intron 22 of 27) intron (NM_000885, intron 22 of 27) 70939 NM_000885 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr2-7990 chr2 66346008 66346218 + 5.89 0.000 Intergenic LTR16A1|LTR|ERVL 12215 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr10-8156 chr10 70930245 70930455 + 5.89 0.000 Intergenic Intergenic -8703 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr2-14011 chr2 191223404 191223614 + 5.89 0.000 Intergenic Intergenic -21895 NM_001161819 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr8-5488 chr8 52186847 52187057 + 5.89 0.000 intron (NM_014682, intron 8 of 25) L1ME3A|LINE|L1 -7410 NR_134310 101929341 Hs.147170 NR_134310 ENSG00000253551 LOC101929341 - uncharacterized LOC101929341 ncRNA chr3-8661 chr3 178669338 178669548 + 5.89 0.000 intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 110593 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr7-8221 chr7 33045607 33045817 + 5.89 0.000 intron (NM_001002009, intron 1 of 9) AluSx4|SINE|Alu -4547 NM_001166118 51251 Hs.487933 NM_016489 ENSG00000122643 NT5C3A NT5C3|P5'N-1|P5N-1|PN-I|POMP|PSN1|UMPH|UMPH1|cN-III|hUMP1|p36 5'-nucleotidase, cytosolic IIIA protein-coding chr17-6413 chr17 2722015 2722225 + 5.89 0.000 3' UTR (NM_001355573, exon 4 of 4) 3' UTR (NM_001355573, exon 4 of 4) 9811 NR_136412 105371592 Hs.731739 NR_136412 ENSG00000262050 LOC105371592 - uncharacterized LOC105371592 ncRNA chr5-8416 chr5 127406644 127406854 + 5.89 0.000 intron (NM_001308121, intron 8 of 13) intron (NM_001308121, intron 8 of 13) -110891 NM_001286808 133619 Hs.483259 NM_130809 ENSG00000164244 PRRC1 - proline rich coiled-coil 1 protein-coding chr5-8325 chr5 117550159 117550369 + 5.89 0.000 intron (NR_046089, intron 4 of 5) intron (NR_046089, intron 4 of 5) 134752 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chrX-3964 chrX 12596544 12596754 + 5.89 0.000 intron (NM_001368400, intron 1 of 15) intron (NM_001368400, intron 1 of 15) 97969 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr20-4406 chr20 58914780 58914990 + 5.89 0.000 Intergenic MIR|SINE|MIR 22722 NR_132272 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|PITA3|POH|SCG6|SgVI GNAS complex locus protein-coding chr13-3169 chr13 105708307 105708517 + 5.89 0.000 intron (NR_046391, intron 3 of 3) (CA)n|Simple_repeat|Simple_repeat 1582 NR_120418 144920 Hs.567700 NR_046391 LINC00343 LINC00344|NCRNA00343|NCRNA00344 long intergenic non-protein coding RNA 343 ncRNA chr6-8340 chr6 147452974 147453184 + 5.89 0.000 Intergenic LTR2|LTR|ERV1 -55611 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr19-4734 chr19 21488865 21489075 + 5.89 0.000 intron (NR_037194, intron 2 of 10) BSR/Beta|Satellite|Satellite 5255 NR_037194 400680 Hs.710554 NR_037194 ENSG00000268658 LINC00664 - long intergenic non-protein coding RNA 664 ncRNA chr10-6181 chr10 18787918 18788128 + 5.89 0.000 Intergenic Intergenic 128592 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding chr1-11828 chr1 31304224 31304434 + 5.89 0.000 intron (NM_001282566, intron 1 of 6) AluSx1|SINE|Alu 7347 NM_001282574 51538 Hs.524094 NM_016505 ENSG00000121766 ZCCHC17 HSPC251|PS1D|pNO40 zinc finger CCHC-type containing 17 protein-coding chr6-4097 chr6 149079721 149079931 + 5.89 0.000 Intergenic Intergenic -47165 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr10-8496 chr10 89883541 89883751 + 5.89 0.000 intron (NR_149080, intron 1 of 1) L1MEc|LINE|L1 -4488 NR_149079 105378425 Hs.559891 NR_149079 ENSG00000280560 LINC01374 TCONS_00018278 long intergenic non-protein coding RNA 1374 ncRNA chr9-7086 chr9 127991549 127991759 + 5.89 0.000 Intergenic AluSq2|SINE|Alu -10665 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr13-4433 chr13 111249382 111249592 + 5.89 0.000 intron (NM_001330597, intron 8 of 18) MER4CL34|LTR|ERV1 8313 NM_001354061 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr4-6411 chr4 124303358 124303568 + 5.89 0.000 Intergenic Intergenic 254971 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr8-3231 chr8 139409225 139409435 + 5.89 0.000 Intergenic L1ME3Cz|LINE|L1 293793 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr4-6518 chr4 165345758 165345968 + 5.89 0.000 Intergenic Intergenic 18194 NM_006745 6307 Hs.105269 NM_006745 ENSG00000052802 MSMO1 DESP4|ERG25|MCCPD|SC4MOL methylsterol monooxygenase 1 protein-coding chr8-7107 chr8 118957543 118957753 + 5.89 0.000 intron (NM_001324095, intron 1 of 7) L2a|LINE|L2 5385 NM_001324095 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding chr9-6668 chr9 134910191 134910401 + 5.89 0.000 intron (NM_002003, intron 8 of 8) intron (NM_002003, intron 8 of 8) 7616 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr12-6773 chr12 8373314 8373524 + 5.89 0.000 intron (NR_024420, intron 1 of 1) intron (NR_024420, intron 1 of 1) 17333 NR_024420 389634 Hs.434403 NM_001012988 ENSG00000226091 LINC00937 - long intergenic non-protein coding RNA 937 ncRNA chr11-7206 chr11 133908852 133909062 + 5.89 0.000 3' UTR (NM_001277285, exon 20 of 20) 3' UTR (NM_001277285, exon 20 of 20) -7217 NR_024344 283174 Hs.504370 NM_001001873 ENSG00000280237 MIR4697HG LINC00947 MIR4697 host gene ncRNA chr10-4866 chr10 16027314 16027524 + 5.89 0.000 Intergenic Intergenic -166886 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chrX-3113 chrX 154522230 154522440 + 5.89 0.000 Intergenic AluSq|SINE|Alu -6093 NM_001171134 60343 Hs.289108 NM_021806 ENSG00000071889 FAM3A 2.19|DLD|DXS560S|XAP-7 family with sequence similarity 3 member A protein-coding chrX-5192 chrX 134148019 134148229 + 5.89 0.000 Intergenic L2a|LINE|L2 21328 NR_029852 574031 NR_029852 ENSG00000284499 MIR363 MIR-363|MIRN363|hsa-mir-363 microRNA 363 ncRNA chr6-8299 chr6 143721612 143721822 + 5.89 0.000 intron (NM_001100165, intron 2 of 11) intron (NM_001100165, intron 2 of 11) 43752 NM_001100164 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr17-8265 chr17 67044779 67044989 + 5.89 0.000 exon (NM_000727, exon 1 of 4) exon (NM_000727, exon 1 of 4) 330 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr6-8448 chr6 153481472 153481682 + 5.89 0.000 Intergenic Intergenic -350295 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chrX-1884 chrX 131317454 131317664 + 5.89 0.000 Intergenic Tigger19a|DNA|TcMar-Tigger -28130 NM_001170961 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr8-6579 chr8 70378571 70378781 + 5.89 0.000 intron (NM_001321703, intron 1 of 22) MIR|SINE|MIR 24714 NM_001321712 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr19-4644 chr19 15628295 15628505 + 5.89 0.000 exon (NM_007253, exon 10 of 13) exon (NM_007253, exon 10 of 13) -12497 NM_000896 4051 Hs.106242 NM_000896 ENSG00000186529 CYP4F3 CPF3|CYP4F|CYPIVF3|LTB4H cytochrome P450 family 4 subfamily F member 3 protein-coding chr3-3896 chr3 44976196 44976406 + 5.89 0.000 promoter-TSS (NR_146163) promoter-TSS (NR_146163) 52 NR_023353 23016 Hs.719958 NM_015004 ENSG00000075914 EXOSC7 EAP1|RRP42|Rrp42p|hRrp42p|p8 exosome component 7 protein-coding chr22-3553 chr22 17368245 17368455 + 5.89 0.000 intron (NM_001290046, intron 1 of 18) intron (NM_001290046, intron 1 of 18) -1110 NM_001290047 27443 Hs.231895 NM_031413 ENSG00000099954 CECR2 - CECR2 histone acetyl-lysine reader protein-coding chr3-3810 chr3 16398436 16398646 + 5.89 0.000 intron (NM_015150, intron 4 of 9) intron (NM_015150, intron 4 of 9) 115158 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr10-5442 chr10 78364894 78365104 + 5.89 0.000 Intergenic Intergenic 97657 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr11-5778 chr11 4773180 4773390 + 5.89 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -3347 NM_001004752 256892 NM_001004752 ENSG00000280021 OR51F1 OR11-21|OR51F1P olfactory receptor family 51 subfamily F member 1 (gene/pseudogene) protein-coding chr5-7333 chr5 16724508 16724718 + 5.89 0.000 intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -107555 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr7-6071 chr7 114521455 114521665 + 5.89 0.000 intron (NR_033767, intron 2 of 17) intron (NR_033767, intron 2 of 17) 95058 NM_001172767 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr1-16409 chr1 225307170 225307380 + 5.89 0.000 intron (NM_001367479, intron 58 of 85) L1MD|LINE|L1 120763 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr2-8586 chr2 137957095 137957305 + 5.89 0.000 Intergenic Intergenic -7273 NM_001024075 3176 Hs.42151 NM_006895 ENSG00000150540 HNMT HMT|HNMT-S1|HNMT-S2|MRT51 histamine N-methyltransferase protein-coding chr11-10526 chr11 119920687 119920897 + 5.89 0.000 Intergenic Intergenic 191209 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr4-8060 chr4 121741603 121741813 + 5.89 0.000 Intergenic L1ME3G|LINE|L1 22586 NM_001317839 132332 Hs.27524 NM_152399 ENSG00000164112 TMEM155 - transmembrane protein 155 protein-coding chr6-5506 chr6 164872919 164873129 + 5.89 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR -50961 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr2-11666 chr2 7265547 7265757 + 5.89 0.000 Intergenic Intergenic -155609 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr5-6508 chr5 1163546 1163756 + 5.89 0.000 Intergenic Intergenic 14954 NR_109911 101928857 Hs.593732 NR_109911 ENSG00000249201 CTD-3080P12.3 - uncharacterized LOC101928857 ncRNA chr5-7744 chr5 60399566 60399776 + 5.89 0.000 intron (NM_001364599, intron 1 of 16) MLT1N2|LTR|ERVL-MaLR -27008 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr21-1936 chr21 45573333 45573543 + 5.89 0.000 Intergenic Intergenic -10413 NM_001352511 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr1-8560 chr1 167894571 167894781 + 5.89 0.000 intron (NM_018417, intron 7 of 32) MER21C|LTR|ERVL 19458 NM_018417 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr3-8939 chr3 14093847 14094057 + 5.89 0.000 Intergenic Intergenic 30918 NM_001098502 131474 Hs.517815 NM_144636 ENSG00000163528 CHCHD4 MIA40|TIMM40 coiled-coil-helix-coiled-coil-helix domain containing 4 protein-coding chr2-7844 chr2 47674645 47674855 + 5.89 0.000 Intergenic Intergenic -104419 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr6-7680 chr6 85700947 85701157 + 5.89 0.000 Intergenic AluSc8|SINE|Alu -22319 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr13-4214 chr13 93361003 93361213 + 5.89 0.000 intron (NM_005708, intron 1 of 8) intron (NM_005708, intron 1 of 8) 134301 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chrX-4338 chrX 46838252 46838462 + 5.89 0.000 intron (NM_006915, intron 1 of 4) intron (NM_006915, intron 1 of 4) 1314 NM_006915 6102 Hs.44766 NM_006915 ENSG00000102218 RP2 DELXp11.3|NM23-H10|NME10|TBCCD2|XRP2 RP2 activator of ARL3 GTPase protein-coding chr1-11637 chr1 244552025 244552235 + 5.89 0.000 intron (NM_001130957, intron 8 of 21) HAL1|LINE|L1 90759 NM_001242340 257044 Hs.459534 NM_173807 ENSG00000179397 CATSPERE C10orf101|C1orf101 catsper channel auxiliary subunit epsilon protein-coding chr2-10318 chr2 147663751 147663961 + 5.89 0.000 Intergenic MamRTE1|LINE|RTE-BovB -180661 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr10-2319 chr10 49413319 49413529 + 5.89 0.000 Intergenic AluJo|SINE|Alu -17335 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding chr9-2046 chr9 8544344 8544554 + 5.89 0.000 intron (NM_130392, intron 3 of 30) intron (NM_130392, intron 3 of 30) 189497 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr9-3631 chr9 91465937 91466147 + 5.89 0.000 Intergenic L1MCa|LINE|L1 -41416 NM_001290000 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chrX-4602 chrX 73747033 73747243 + 5.89 0.000 Intergenic L1MA1|LINE|L1 -45067 NR_003255 9383 Hs.529901 NR_003255 ENSG00000270641 TSIX LINC00013|NCRNA00013|XIST-AS|XIST-AS1|XISTAS TSIX transcript, XIST antisense RNA ncRNA chr9-4762 chr9 132817226 132817436 + 5.89 0.000 intron (NM_001317959, intron 11 of 14) L1MEf|LINE|L1 -61013 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr4-8199 chr4 134464621 134464831 + 5.89 0.000 intron (NR_147155, intron 3 of 3) intron (NR_147155, intron 3 of 3) 40858 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr4-5841 chr4 107128015 107128225 + 5.89 0.000 Intergenic Intergenic -91807 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr1-12637 chr1 41163124 41163334 + 5.89 0.000 promoter-TSS (NM_001172221) promoter-TSS (NM_001172221) -212 NM_001172221 22955 Hs.571874 NM_012236 ENSG00000010803 SCMH1 Scml3 Scm polycomb group protein homolog 1 protein-coding chrX-4154 chrX 30649467 30649677 + 5.89 0.000 Intergenic MIR3|SINE|MIR -3787 NM_001128127 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr12-5920 chr12 67233772 67233982 + 5.89 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -35481 NM_018448 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr10-7914 chr10 50685806 50686016 + 5.89 0.000 Intergenic Intergenic -53777 NR_135904 653308 Hs.659820 NM_001079516 ENSG00000204147 ASAH2B ASAH2C|ASAH2L|bA449O16.3|bA98I6.3 N-acylsphingosine amidohydrolase 2B protein-coding chr2-10754 chr2 37257627 37257837 + 5.89 0.000 intron (NM_005813, intron 15 of 17) intron (NM_005813, intron 15 of 17) 26074 NM_001350025 55471 Hs.433466 NM_018607 ENSG00000003509 NDUFAF7 C2orf56|MidA|PRO1853 NADH:ubiquinone oxidoreductase complex assembly factor 7 protein-coding chr18-2616 chr18 28607919 28608129 + 5.89 0.000 Intergenic L1M4|LINE|L1 -430894 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chrX-2141 chrX 34558155 34558365 + 5.89 0.000 Intergenic L1MEc|LINE|L1 99025 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr2-14151 chr2 203802334 203802544 + 5.89 0.000 Intergenic MER5A1|DNA|hAT-Charlie -65332 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr1-13675 chr1 11822204 11822414 + 5.89 0.000 intron (NM_001286, intron 5 of 22) AluJb|SINE|Alu 16118 NM_001286 1185 Hs.193043 NM_001286 ENSG00000011021 CLCN6 CLC-6 chloride voltage-gated channel 6 protein-coding chr9-7973 chr9 92385415 92385625 + 5.89 0.000 3' UTR (NM_033014, exon 7 of 7) 3' UTR (NM_033014, exon 7 of 7) 19058 NM_014057 4969 Hs.109439 NM_014057 ENSG00000106809 OGN OG|OIF|SLRR3A osteoglycin protein-coding chr8-6968 chr8 106922526 106922736 + 5.89 0.000 Intergenic Intergenic -152387 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr4-6129 chr4 25091949 25092159 + 5.89 0.000 Intergenic LTR56|LTR|ERV1 -61108 NM_018176 55203 Hs.12488 NM_018176 ENSG00000153012 LGI2 LGIL2 leucine rich repeat LGI family member 2 protein-coding chr10-9006 chr10 121776000 121776210 + 5.89 0.000 intron (NM_001001976, intron 11 of 11) L1MA4|LINE|L1 151926 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr4-2367 chr4 4860769 4860979 + 5.89 0.000 intron (NM_002448, intron 1 of 1) intron (NM_002448, intron 1 of 1) 1209 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr22-3572 chr22 19407152 19407362 + 5.89 0.000 exon (NM_003325, exon 4 of 25) exon (NM_003325, exon 4 of 25) 24476 NM_003325 7290 Hs.474206 NM_003325 ENSG00000100084 HIRA DGCR1|TUP1|TUPLE1 histone cell cycle regulator protein-coding chr2-10953 chr2 84658382 84658592 + 5.89 0.000 intron (NM_001370, intron 36 of 76) intron (NM_001370, intron 36 of 76) 142032 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chr10-8249 chr10 74725680 74725890 + 5.89 0.000 Intergenic L1ME1|LINE|L1 -99470 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr2-14645 chr2 235354320 235354530 + 5.89 0.000 Intergenic Intergenic -139618 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr2-10305 chr2 138606228 138606438 + 5.89 0.000 Intergenic Intergenic 104563 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr8-7041 chr8 113044302 113044512 + 5.89 0.000 intron (NM_001363185, intron 5 of 66) L2a|LINE|L2 332745 NM_198124 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr14-5318 chr14 101941193 101941403 + 5.89 0.000 Intergenic AluSc|SINE|Alu -23275 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr11-10196 chr11 95918717 95918927 + 5.89 0.000 intron (NM_001243571, intron 1 of 17) MamSINE1|SINE|tRNA-RTE 5285 NM_201281 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr7-6620 chr7 107702688 107702898 + 5.89 0.000 intron (NM_000441, intron 17 of 20) intron (NM_000441, intron 17 of 20) 40839 NR_144536 101927974 Hs.432792 NR_144536 ENSG00000241764 LOC101927974 - uncharacterized LOC101927974 ncRNA chr21-1625 chr21 20963496 20963706 + 5.89 0.000 Intergenic Charlie17b|DNA|hAT-Charlie -34808 NM_001352592 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr1-12552 chr1 28699079 28699289 + 5.89 0.000 intron (NM_001319674, intron 6 of 9) intron (NM_001319674, intron 6 of 9) 30400 NM_024482 10691 Hs.632373 NM_006582 ENSG00000162419 GMEB1 P96PIF|PIF96 glucocorticoid modulatory element binding protein 1 protein-coding chr11-6858 chr11 100173006 100173216 + 5.89 0.000 intron (NM_001243270, intron 12 of 23) intron (NM_001243270, intron 12 of 23) -514177 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr16-6788 chr16 77899160 77899370 + 5.89 0.000 intron (NM_020927, intron 7 of 8) MIRb|SINE|MIR 110701 NM_020927 57687 Hs.461405 NM_020927 ENSG00000171724 VAT1L - vesicle amine transport 1 like protein-coding chr12-8041 chr12 114240183 114240393 + 5.89 0.000 intron (NR_146536, intron 1 of 1) intron (NR_146536, intron 1 of 1) 1482 NR_146536 105369996 Hs.577438 NR_146536 ENSG00000257476 LINC02459 - long intergenic non-protein coding RNA 2459 ncRNA chrX-3058 chrX 106611730 106611940 + 5.89 0.000 promoter-TSS (NM_018015) promoter-TSS (NM_018015) -95 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding KI270803.1-2 KI270803.1 688703 688913 + 5.89 0.000 NA NA NA NA chr1-4493 chr1 21994187 21994397 + 5.89 0.000 Intergenic LTR33A_|LTR|ERVL -7365 NM_005747 10136 Hs.181289 NM_005747 ENSG00000142789 CELA3A ELA3|ELA3A chymotrypsin like elastase 3A protein-coding chr16-6678 chr16 69880959 69881169 + 5.89 0.000 intron (NM_001270453, intron 4 of 20) intron (NM_001270453, intron 4 of 20) 42327 NM_001270453 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr7-8936 chr7 96440659 96440869 + 5.89 0.000 Intergenic Intergenic 62759 NR_163949 chr8-7234 chr8 127583633 127583843 + 5.89 0.000 Intergenic Intergenic -101599 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr8-7040 chr8 112836150 112836360 + 5.89 0.000 intron (NM_001363185, intron 9 of 66) intron (NM_001363185, intron 9 of 66) 192762 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr1-13206 chr1 209153421 209153631 + 5.89 0.000 Intergenic Intergenic -171930 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr7-9270 chr7 124380449 124380659 + 5.89 0.000 Intergenic L1M1|LINE|L1 -28458 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr2-14811 chr2 241040115 241040325 + 5.89 0.000 intron (NM_001080437, intron 7 of 31) intron (NM_001080437, intron 7 of 31) 41602 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr1-11373 chr1 41475053 41475263 + 5.89 0.000 Intergenic Intergenic 9525 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr1-15427 chr1 153057357 153057567 + 5.89 0.000 promoter-TSS (NM_005988) promoter-TSS (NM_005988) 50 NM_005988 6700 Hs.355542 NM_005988 ENSG00000241794 SPRR2A - small proline rich protein 2A protein-coding chr7-9358 chr7 129695502 129695712 + 5.89 0.000 intron (NM_005011, intron 5 of 10) intron (NM_005011, intron 5 of 10) 65529 NM_001040110 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr3-9766 chr3 70154268 70154478 + 5.89 0.000 Intergenic MIR|SINE|MIR 154629 NR_110000 101927152 Hs.382046 NR_110000 ENSG00000240405 SAMMSON LINC01212 survival associated mitochondrial melanoma specific oncogenic non-coding RNA ncRNA chr5-4811 chr5 58767796 58768006 + 5.89 0.000 intron (NM_138453, intron 3 of 4) L2a|LINE|L2 184826 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr12-2989 chr12 119252486 119252696 + 5.89 0.000 Intergenic Intergenic 50789 NR_024246 144742 Hs.524782 NR_024246 ENSG00000281196 LINC00934 - long intergenic non-protein coding RNA 934 ncRNA chr1-12226 chr1 211970859 211971069 + 5.89 0.000 intron (NM_015434, intron 13 of 19) MER20B|DNA|hAT-Charlie -64589 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr6-5342 chr6 146586182 146586392 + 5.89 0.000 Intergenic MLT2B2|LTR|ERVL 12644 NR_125860 101928661 Hs.711833 NR_125860 ENSG00000237468 LOC101928661 - uncharacterized LOC101928661 ncRNA chr16-5506 chr16 13176574 13176784 + 5.89 0.000 intron (NM_001145204, intron 2 of 4) intron (NM_001145204, intron 2 of 4) 275081 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr16-6306 chr16 47857291 47857501 + 5.89 0.000 intron (NR_110649, intron 1 of 1) (TA)n|Simple_repeat|Simple_repeat -1185 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA chr2-13224 chr2 123832067 123832277 + 5.89 0.000 Intergenic L1M4c|LINE|L1 193002 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA chr13-2503 chr13 53337585 53337795 + 5.89 0.000 Intergenic Intergenic -185790 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr6-5191 chr6 131206825 131207035 + 5.89 0.000 intron (NM_016377, intron 6 of 7) intron (NM_016377, intron 6 of 7) -43474 NM_004842 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr6-7313 chr6 44361493 44361703 + 5.89 0.000 intron (NM_145026, intron 4 of 8) intron (NM_145026, intron 4 of 8) 18938 NM_145026 221409 Hs.135283 NM_145026 ENSG00000249481 SPATS1 DDIP|SPATA8|SRSP1 spermatogenesis associated serine rich 1 protein-coding chr13-3037 chr13 27152349 27152559 + 5.89 0.000 intron (NR_046547, intron 1 of 2) L1MB8|LINE|L1 19357 NM_182488 219333 Hs.42400 NM_182488 ENSG00000152484 USP12 UBH1|USP12L1 ubiquitin specific peptidase 12 protein-coding chr7-6898 chr7 72264616 72264826 + 5.89 0.000 intron (NM_001363460, intron 2 of 5) L1PA13|LINE|L1 72670 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr6-7668 chr6 84667716 84667926 + 5.89 0.000 Intergenic LTR73|LTR|ERV1 -21637 NR_125875 102724201 Hs.667523 NR_125875 ENSG00000228290 TBX18-AS1 - TBX18 antisense RNA 1 ncRNA chr22-3683 chr22 23691155 23691365 + 5.89 0.000 5' UTR (NM_153615, exon 1 of 11) 5' UTR (NM_153615, exon 1 of 11) 399 NM_153615 266747 Hs.658997 NM_153615 ENSG00000159496 RGL4 Rgr ral guanine nucleotide dissociation stimulator like 4 protein-coding chr4-8567 chr4 167298815 167299025 + 5.89 0.000 Intergenic Intergenic -64330 NM_001251967 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr9-8447 chr9 122500145 122500355 + 5.89 0.000 Intergenic L1PA15-16|LINE|L1 -10552 NM_054107 26740 Hs.460145 NM_054107 ENSG00000197233 OR1J2 HG152|HSA5|OR1J3|OR1J5|OR9-19|OST044 olfactory receptor family 1 subfamily J member 2 protein-coding chr4-5774 chr4 73524654 73524864 + 5.89 0.000 intron (NR_046377, intron 3 of 3) L1M1|LINE|L1 15956 NR_046377 728040 Hs.640574 NR_046377 ENSG00000250436 LINC02499 - long intergenic non-protein coding RNA 2499 ncRNA chr2-10650 chr2 17585580 17585790 + 5.89 0.000 intron (NM_001366806, intron 1 of 3) MIR3|SINE|MIR 44989 NM_003385 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr10-7869 chr10 48234816 48235026 + 5.89 0.000 intron (NM_001018071, intron 9 of 28) intron (NM_001018071, intron 9 of 28) 16836 NM_001318191 143162 Hs.664786 NM_152428 ENSG00000170324 FRMPD2 PDZD5C|PDZK4|PDZK5C FERM and PDZ domain containing 2 protein-coding chr1-13782 chr1 17808791 17809001 + 5.89 0.000 intron (NM_030812, intron 1 of 2) intron (NM_030812, intron 1 of 2) 53563 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr5-4801 chr5 57499594 57499804 + 5.89 0.000 Intergenic Intergenic -16888 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr17-3438 chr17 19237501 19237711 + 5.89 0.000 intron (NM_001102664, intron 1 of 7) CpG 229 NM_148921 22905 Hs.743983 NM_014964 ENSG00000072134 EPN2 EHB21 epsin 2 protein-coding chr8-5927 chr8 18833449 18833659 + 5.89 0.000 intron (NM_015310, intron 4 of 15) intron (NM_015310, intron 4 of 15) -24687 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr3-8783 chr3 5009976 5010186 + 5.89 0.000 Intergenic Intergenic -30120 NR_125916 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr4-7278 chr4 49067488 49067698 + 5.89 0.000 Intergenic L1PA4|LINE|L1 80951 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr15-5300 chr15 101427066 101427276 + 5.89 0.000 intron (NM_138325, intron 6 of 13) intron (NM_138325, intron 6 of 13) 62536 NM_002570 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr20-2791 chr20 56024343 56024553 + 5.89 0.000 Intergenic L2b|LINE|L2 -18929 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr1-14511 chr1 50746787 50746997 + 5.89 0.000 intron (NM_007051, intron 4 of 18) MSTA-int|LTR|ERVL-MaLR 213375 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr20-4469 chr20 62556724 62556934 + 5.89 0.000 intron (NM_001302812, intron 3 of 4) intron (NM_001302812, intron 3 of 4) 2523 NR_029780 406904 NR_029780 ENSG00000199017 MIR1-1 MIRN1-1|hsa-mir-1-1|miRNA1-1|mir-1-1 microRNA 1-1 ncRNA chr6-4960 chr6 104297716 104297926 + 5.89 0.000 Intergenic Intergenic 561725 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr5-7612 chr5 44504977 44505187 + 5.89 0.000 intron (NR_131946, intron 1 of 2) MLT-int|LTR|ERVL-MaLR 5200 NR_131946 102723839 Hs.561412 NR_131946 LINC02224 BRCAT107 long intergenic non-protein coding RNA 2224 ncRNA chr5-6294 chr5 116887219 116887429 + 5.89 0.000 Intergenic Intergenic -125115 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr15-1894 chr15 72972381 72972591 + 5.89 0.000 Intergenic Intergenic -79977 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr3-8549 chr3 146438830 146439040 + 5.89 0.000 intron (NM_001199978, intron 9 of 9) L1PA5|LINE|L1 30366 NM_001199978 57047 Hs.744414 NM_020359 ENSG00000163746 PLSCR2 - phospholipid scramblase 2 protein-coding chr22-2565 chr22 27416981 27417191 + 5.89 0.000 Intergenic L2b|LINE|L2 106435 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr1-15268 chr1 114354842 114355052 + 5.89 0.000 Intergenic AluJb|SINE|Alu 156256 NM_033020 51592 Hs.26837 NM_015906 ENSG00000197323 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding chr11-7991 chr11 11521366 11521576 + 5.89 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 100534 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr17-8325 chr17 72591489 72591699 + 5.89 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 1210 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chrX-4493 chrX 64857475 64857685 + 5.89 0.000 Intergenic MLT2A2|LTR|ERVL 118870 NR_045044 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr11-5955 chr11 17468146 17468356 + 5.89 0.000 intron (NR_147094, intron 3 of 37) intron (NR_147094, intron 3 of 37) 8594 NR_147094 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr17-3577 chr17 80361577 80361787 + 5.89 0.000 intron (NM_001256071, intron 38 of 67) intron (NM_001256071, intron 38 of 67) -53485 NM_001164637 284131 Hs.389678 NM_173627 ENSG00000173818 ENDOV - endonuclease V protein-coding chr15-2774 chr15 33242871 33243081 + 5.89 0.000 intron (NR_046005, intron 5 of 8) MIR|SINE|MIR 4579 NR_046005 100652857 Hs.439998 NR_046005 TMCO5B - transmembrane and coiled-coil domains 5B (pseudogene) pseudo chrX-5153 chrX 131332254 131332464 + 5.89 0.000 Intergenic Intergenic -42930 NM_001170961 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr12-5317 chr12 112992924 112993134 + 5.89 0.000 intron (NM_002535, intron 2 of 9) intron (NM_002535, intron 2 of 9) 14510 NM_016817 4939 Hs.414332 NM_002535 ENSG00000111335 OAS2 - 2'-5'-oligoadenylate synthetase 2 protein-coding chr8-4263 chr8 93613790 93614000 + 5.89 0.000 intron (NR_033858, intron 5 of 10) MIRc|SINE|MIR 86538 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr19-5620 chr19 3903042 3903252 + 5.89 0.000 intron (NM_033064, intron 3 of 12) AluJo|SINE|Alu 22462 NM_033064 85300 Hs.418055 NM_033064 ENSG00000167654 ATCAY BNIP-H|CLAC ATCAY kinesin light chain interacting caytaxin protein-coding chr3-6145 chr3 56952697 56952907 + 5.89 0.000 intron (NR_046572, intron 2 of 2) intron (NR_046572, intron 2 of 2) 12762 NR_046572 100874200 Hs.549631 NR_046572 ENSG00000240198 ARHGEF3-AS1 - ARHGEF3 antisense RNA 1 ncRNA chr18-1736 chr18 6242033 6242243 + 5.89 0.000 intron (NM_001365769, intron 7 of 16) intron (NM_001365769, intron 7 of 16) -14606 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA chr5-2702 chr5 81904989 81905199 + 5.89 0.000 Intergenic Intergenic -66929 NM_001131028 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding chr18-2444 chr18 31586166 31586376 + 5.89 0.000 Intergenic Intergenic -5496 NM_000371 7276 Hs.427202 NM_000371 ENSG00000118271 TTR ATTR|CTS|CTS1|HEL111|HsT2651|PALB|TBPA transthyretin protein-coding chr6-6287 chr6 37536008 37536218 + 5.89 0.000 non-coding (NR_126057, exon 4 of 4) non-coding (NR_126057, exon 4 of 4) 19309 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr13-4041 chr13 73804045 73804255 + 5.89 0.000 intron (NM_007249, intron 5 of 7) L2c|LINE|L2 239906 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr2-12800 chr2 88227391 88227601 + 5.89 0.000 Intergenic Intergenic 54357 NM_018271 55258 Hs.739080 NM_018271 ENSG00000144115 THNSL2 SOFAT|THS2|TSH2 threonine synthase like 2 protein-coding chr11-10557 chr11 121441524 121441734 + 5.89 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -10685 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr18-2696 chr18 60339917 60340127 + 5.89 0.000 Intergenic Intergenic 32753 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr13-3461 chr13 111252325 111252535 + 5.89 0.000 intron (NM_001330597, intron 8 of 18) intron (NM_001330597, intron 8 of 18) 11256 NM_001354061 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr1-16277 chr1 213097662 213097872 + 5.89 0.000 intron (NM_001349671, intron 4 of 12) Tigger1|DNA|TcMar-Tigger 46526 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chrX-2868 chrX 143464383 143464593 + 5.89 0.000 Intergenic Intergenic 52987 NM_001009609 139067 Hs.447320 NM_001009609 ENSG00000189252 SPANXN3 CT11.8|SPANX-N3 SPANX family member N3 protein-coding chr15-3226 chr15 73768865 73769075 + 5.89 0.000 intron (NR_120352, intron 2 of 2) AluSx1|SINE|Alu 756 NR_120352 101929221 NR_120352 INSYN1-AS1 C15orf59-AS1 INSYN1 antisense RNA 1 ncRNA chr6-7694 chr6 86591451 86591661 + 5.89 0.000 Intergenic MIR|SINE|MIR -345972 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr11-8390 chr11 93224558 93224768 + 5.89 0.000 Intergenic Intergenic -26672 NM_152313 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr22-3939 chr22 37066761 37066971 + 5.89 0.000 exon (NM_001289000, exon 18 of 19) exon (NM_001289000, exon 18 of 19) 15130 NM_001282684 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr9-5550 chr9 109930901 109931111 + 5.89 0.000 intron (NM_001037293, intron 6 of 6) intron (NM_001037293, intron 6 of 6) -117592 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr6-8460 chr6 154462419 154462629 + 5.89 0.000 intron (NM_001368117, intron 1 of 12) L2|LINE|L2 15967 NM_001368118 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chrX-3885 chrX 6075945 6076155 + 5.89 0.000 intron (NM_001282145, intron 3 of 6) intron (NM_001282145, intron 3 of 6) -150308 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr12-5166 chr12 102848789 102848999 + 5.89 0.000 intron (NM_000277, intron 8 of 12) intron (NM_000277, intron 8 of 12) -24495 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr22-3247 chr22 43666035 43666245 + 5.89 0.000 intron (NM_198856, intron 15 of 29) intron (NM_198856, intron 15 of 29) 146165 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr11-10680 chr11 128613339 128613549 + 5.89 0.000 Intergenic Intergenic -25886 NM_001143820 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr9-6467 chr9 89629499 89629709 + 5.89 0.000 Intergenic Intergenic -10179 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr12-4626 chr12 41914246 41914456 + 5.89 0.000 Intergenic L2c|LINE|L2 150162 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr18-1753 chr18 8550136 8550346 + 5.89 0.000 Intergenic L1MB3|LINE|L1 -59204 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr15-4172 chr15 94278537 94278747 + 5.89 0.000 Intergenic L1PA15|LINE|L1 -19559 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr6-6112 chr6 154232345 154232555 + 5.89 0.000 intron (NM_015553, intron 5 of 11) intron (NM_015553, intron 5 of 11) 97631 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr5-6757 chr5 81168451 81168661 + 5.89 0.000 intron (NM_006909, intron 17 of 26) AluSx|SINE|Alu -64764 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr8-5054 chr8 27897979 27898189 + 5.89 0.000 intron (NM_173833, intron 7 of 8) intron (NM_173833, intron 7 of 8) -11968 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr16-4277 chr16 25388709 25388919 + 5.89 0.000 Intergenic LTR16|LTR|ERVL -130969 NM_001012981 342357 Hs.513451 NM_001012981 ENSG00000155592 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding chr17-5572 chr17 45110642 45110852 + 5.89 0.000 3' UTR (NM_133373, exon 15 of 15) 3' UTR (NM_133373, exon 15 of 15) 3686 NR_106842 102465470 NR_106842 ENSG00000277249 MIR6784 hsa-mir-6784 microRNA 6784 ncRNA chr14-4461 chr14 34113167 34113377 + 5.89 0.000 Intergenic Intergenic -162198 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr1-14438 chr1 45770896 45771106 + 5.89 0.000 Intergenic L1MEc|LINE|L1 -20188 NM_001145349 3652 Hs.744252 NM_005897 ENSG00000197429 IPP KLHL27 intracisternal A particle-promoted polypeptide protein-coding chr4-8644 chr4 175651291 175651501 + 5.89 0.000 intron (NM_201592, intron 4 of 6) intron (NM_201592, intron 4 of 6) 136280 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr1-15417 chr1 152124209 152124419 + 5.89 0.000 Intergenic Intergenic -8860 NM_007113 7062 Hs.432416 NM_007113 ENSG00000159450 TCHH THH|THL|TRHY|UHS3 trichohyalin protein-coding chr1-14272 chr1 37110733 37110943 + 5.89 0.000 Intergenic Intergenic -50725 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr13-3465 chr13 111972004 111972214 + 5.89 0.000 promoter-TSS (NR_120392) promoter-TSS (NR_120392) -201 NR_120392 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr11-10620 chr11 125220946 125221156 + 5.89 0.000 intron (NM_022062, intron 1 of 12) AluSx3|SINE|Alu 56300 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr5-6034 chr5 167371246 167371456 + 5.89 0.000 intron (NM_001122679, intron 2 of 29) AluSp|SINE|Alu -202308 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr5-8724 chr5 144438431 144438641 + 5.89 0.000 intron (NM_001370487, intron 2 of 2) MLT1K|LTR|ERVL-MaLR 233145 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr7-4350 chr7 49788656 49788866 + 5.89 0.000 intron (NR_136188, intron 1 of 3) (TG)n|Simple_repeat|Simple_repeat 13428 NR_136188 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr9-4547 chr9 84134707 84134917 + 5.89 0.000 Intergenic MLT2A2|LTR|ERVL 71369 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr22-3680 chr22 23613481 23613691 + 5.89 0.000 intron (NM_016449, intron 10 of 11) intron (NM_016449, intron 10 of 11) 18735 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr1-15019 chr1 92922429 92922639 + 5.89 0.000 intron (NM_001006605, intron 1 of 4) intron (NM_001006605, intron 1 of 4) 38928 NM_001006605 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr15-4222 chr15 26944486 26944696 + 5.89 0.000 intron (NM_001165037, intron 10 of 10) intron (NM_001165037, intron 10 of 10) -26590 NM_001270873 2567 Hs.569475 NM_033223 ENSG00000182256 GABRG3 - gamma-aminobutyric acid type A receptor gamma3 subunit protein-coding chr4-8710 chr4 182861937 182862147 + 5.89 0.000 Intergenic Intergenic 55211 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr3-6486 chr3 111717526 111717736 + 5.89 0.000 intron (NM_153268, intron 3 of 3) intron (NM_153268, intron 3 of 3) -14865 NM_001134437 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr19-5671 chr19 8481223 8481433 + 5.89 0.000 intron (NM_001297418, intron 10 of 13) intron (NM_001297418, intron 10 of 13) 21312 NM_032152 84106 Hs.465812 NM_032152 ENSG00000133246 PRAM1 PML-RAR|PRAM-1 PML-RARA regulated adaptor molecule 1 protein-coding chr5-7036 chr5 166836455 166836665 + 5.89 0.000 Intergenic Intergenic 89810 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr3-8867 chr3 10303798 10304008 + 5.89 0.000 intron (NM_001136232, intron 8 of 8) intron (NM_001136232, intron 8 of 8) -10956 NM_001302824 51738 Hs.590080 NM_016362 ENSG00000157017 GHRL MTLRP ghrelin and obestatin prepropeptide protein-coding chr8-3584 chr8 134921928 134922138 + 5.89 0.000 Intergenic Intergenic 72098 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr11-7714 chr11 71704017 71704227 + 5.89 0.000 Intergenic Intergenic -83389 NM_001099653 55199 Hs.567527 NM_018172 ENSG00000158483 FAM86C1 FAM86C family with sequence similarity 86 member C1 protein-coding chr10-7047 chr10 82640123 82640333 + 5.89 0.000 intron (NR_163253, intron 3 of 10) L1PA13|LINE|L1 -407308 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr16-6952 chr16 85901067 85901277 + 5.89 0.000 intron (NM_002163, intron 1 of 8) intron (NM_002163, intron 1 of 8) -1658 NM_001363907 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr12-5982 chr12 94126376 94126586 + 5.89 0.000 Intergenic Intergenic -22096 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr8-6975 chr8 107569983 107570193 + 5.89 0.000 Intergenic SATR1|Satellite|Satellite -72170 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr2-10448 chr2 208831776 208831986 + 5.89 0.000 Intergenic L1PA4|LINE|L1 289239 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr3-8767 chr3 3263559 3263769 + 5.89 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -83947 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chrX-3373 chrX 149806267 149806477 + 5.89 0.000 Intergenic Intergenic -19336 NR_109813 101241891 Hs.744829 NR_109813 ENSG00000280752 LINC00850 KUCG1 long intergenic non-protein coding RNA 850 ncRNA chr10-3176 chr10 86228151 86228361 + 5.89 0.000 intron (NM_017551, intron 2 of 15) G-rich|Low_complexity|Low_complexity 36532 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr19-2857 chr19 8544041 8544251 + 5.89 0.000 intron (NM_012335, intron 14 of 27) intron (NM_012335, intron 14 of 27) -29979 NM_032370 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr22-4268 chr22 48726703 48726913 + 5.89 0.000 intron (NM_001082967, intron 3 of 3) LTR32|LTR|ERVL -53487 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr8-5335 chr8 6588307 6588517 + 5.89 0.000 intron (NM_024596, intron 12 of 13) MamTip3|DNA|hAT-Tip100 -25167 NM_001118888 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr1-16433 chr1 226553918 226554128 + 5.89 0.000 intron (NM_001003665, intron 1 of 3) MLT1I|LTR|ERVL-MaLR 5259 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr16-2163 chr16 66309611 66309821 + 5.89 0.000 Intergenic Intergenic -56975 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr16-4818 chr16 86758582 86758792 + 5.89 0.000 Intergenic Intergenic 36596 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr2-2863 chr2 168118611 168118821 + 5.89 0.000 intron (NM_013233, intron 10 of 17) intron (NM_013233, intron 10 of 17) 128879 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr6-8531 chr6 160386618 160386828 + 5.89 0.000 intron (NM_021977, intron 1 of 10) intron (NM_021977, intron 1 of 10) 38345 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr5-3946 chr5 1604729 1604939 + 5.89 0.000 intron (NR_003713, intron 2 of 3) intron (NR_003713, intron 2 of 3) -10303 NR_003263 728609 Hs.379186 NR_003263 SDHAP3 SDHACL|SDHAL succinate dehydrogenase complex flavoprotein subunit A pseudogene 3 pseudo chr8-6536 chr8 68316142 68316352 + 5.89 0.000 intron (NR_038877, intron 1 of 2) L1ME3C|LINE|L1 -14126 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr2-12739 chr2 84177608 84177818 + 5.89 0.000 Intergenic Intergenic -112969 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr16-5016 chr16 35233917 35234127 + 5.89 0.000 Intergenic Intergenic 38263 NR_157262 112268173 Hs.369226 NR_157261 LOC112268173 - uncharacterized LOC112268173 ncRNA chr9-7582 chr9 36163848 36164058 + 5.89 0.000 TTS (NM_022343) TTS (NM_022343) -5435 NM_005893 881 Hs.115460 NM_005893 ENSG00000185972 CCIN BTBD20|KBTBD14 calicin protein-coding chr16-6478 chr16 58079736 58079946 + 5.89 0.000 Intergenic AluJb|SINE|Alu 49540 NM_013242 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr3-5566 chr3 5124071 5124281 + 5.89 0.000 intron (NM_018184, intron 1 of 6) intron (NM_018184, intron 1 of 6) 1884 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr15-4531 chr15 55400648 55400858 + 5.89 0.000 intron (NR_037923, intron 8 of 15) L1ME3Cz|LINE|L1 7606 NM_004748 9236 Hs.285051 NM_004748 ENSG00000260916 CCPG1 CPR8 cell cycle progression 1 protein-coding chr11-10069 chr11 84861060 84861270 + 5.89 0.000 intron (NM_001351274, intron 5 of 26) L2c|LINE|L2 62256 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr17-3910 chr17 55617571 55617781 + 5.89 0.000 Intergenic Intergenic 105188 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr7-8601 chr7 66973851 66974061 + 5.89 0.000 Intergenic AluSp|SINE|Alu 21630 NM_016038 51119 Hs.110445 NM_016038 ENSG00000126524 SBDS CGI-97|SDS|SWDS SBDS ribosome maturation factor protein-coding chr5-8918 chr5 157361401 157361611 + 5.89 0.000 exon (NM_001291721, exon 25 of 30) exon (NM_001291721, exon 25 of 30) -15829 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr19-4133 chr19 19150714 19150924 + 5.89 0.000 intron (NR_027308, intron 5 of 11) intron (NR_027308, intron 5 of 11) -12341 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr8-3727 chr8 21764139 21764349 + 5.89 0.000 intron (NM_001165039, intron 1 of 6) MLT1A0|LTR|ERVL-MaLR 24631 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr2-13903 chr2 181453887 181454097 + 5.89 0.000 Intergenic L1MA4|LINE|L1 -2900 NM_001316312 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr18-2065 chr18 48054111 48054321 + 5.89 0.000 intron (NM_001371286, intron 3 of 4) intron (NM_001371286, intron 3 of 4) 82932 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr17-7764 chr17 35069416 35069626 + 5.89 0.000 intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) -5814 NM_001017368 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr5-8080 chr5 95402288 95402498 + 5.89 0.000 intron (NM_152548, intron 3 of 9) intron (NM_152548, intron 3 of 9) 11027 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr13-3889 chr13 52847040 52847250 + 5.89 0.000 exon (NM_002590, exon 1 of 3) exon (NM_002590, exon 1 of 3) 1495 NM_032949 5100 Hs.19492 NM_002590 ENSG00000136099 PCDH8 ARCADLIN|PAPC protocadherin 8 protein-coding chr12-5081 chr12 93509700 93509910 + 5.89 0.000 non-coding (NR_038159, exon 7 of 7) non-coding (NR_038159, exon 7 of 7) 42291 NM_014050 28977 Hs.199579 NM_014050 ENSG00000198015 MRPL42 HSPC204|L31MT|L42MT|MRP-L31|MRP-L42|MRP-S32|MRPL31|MRPS32|PTD007|RPML31|S32MT mitochondrial ribosomal protein L42 protein-coding chr3-6023 chr3 49388001 49388211 + 5.89 0.000 intron (NM_001664, intron 1 of 4) AluJb|SINE|Alu 23870 NM_001313946 387 Hs.247077 NM_001664 ENSG00000067560 RHOA ARH12|ARHA|RHO12|RHOH12 ras homolog family member A protein-coding chr1-7727 chr1 29236518 29236728 + 5.89 0.000 5' UTR (NM_001195001, exon 1 of 30) 5' UTR (NM_001195001, exon 1 of 30) 101 NM_133178 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr14-2505 chr14 103468155 103468365 + 5.89 0.000 intron (NM_001128920, intron 12 of 15) intron (NM_001128920, intron 12 of 15) 54570 NM_001823 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr16-5556 chr16 30564492 30564702 + 5.89 0.000 Intergenic Intergenic -6223 NM_001172679 92595 Hs.132227 NM_033410 ENSG00000169951 ZNF764 - zinc finger protein 764 protein-coding chr17-8652 chr17 81969875 81970085 + 5.89 0.000 Intergenic AluSx|SINE|Alu -7649 NM_001251888 79058 Hs.298351 NM_024083 ENSG00000169696 ASPSCR1 ASPCR1|ASPL|ASPS|RCC17|TUG|UBXD9|UBXN9 ASPSCR1 tether for SLC2A4, UBX domain containing protein-coding chr6-5311 chr6 143136070 143136280 + 5.89 0.000 intron (NM_001366358, intron 1 of 5) intron (NM_001366358, intron 1 of 5) 10036 NM_001366358 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr7-4322 chr7 37192405 37192615 + 5.89 0.000 intron (NM_001206480, intron 13 of 21) AluSc|SINE|Alu 161158 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr21-1380 chr21 42907355 42907565 + 5.89 0.000 intron (NM_021075, intron 3 of 3) AluSz6|SINE|Alu 14151 NM_001001503 4731 Hs.473937 NM_021075 ENSG00000160194 NDUFV3 CI-10k|CI-9KD NADH:ubiquinone oxidoreductase subunit V3 protein-coding chr19-5422 chr19 18099018 18099228 + 5.89 0.000 promoter-TSS (NM_001290024) promoter-TSS (NM_001290024) -307 NM_001290024 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr22-2264 chr22 31125790 31126000 + 5.89 0.000 exon (NM_001284289, exon 4 of 15) exon (NM_001284289, exon 4 of 15) 2929 NM_001284285 27124 Hs.517549 NM_014422 ENSG00000185133 INPP5J INPP5|PIB5PA|PIPP inositol polyphosphate-5-phosphatase J protein-coding chr5-4117 chr5 76168252 76168462 + 5.89 0.000 intron (NM_014979, intron 2 of 12) intron (NM_014979, intron 2 of 12) 84974 NM_014979 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr16-7113 chr16 89650183 89650393 + 5.89 0.000 intron (NR_046418, intron 3 of 6) AluSx|SINE|Alu 7420 NR_046418 5119 Hs.589427 NM_002768 ENSG00000131165 CHMP1A CHMP1|PCH8|PCOLN3|PRSM1|VPS46-1|VPS46A charged multivesicular body protein 1A protein-coding chr9-3227 chr9 136558148 136558358 + 5.89 0.000 Intergenic AluY|SINE|Alu 10411 NR_121577 101928483 Hs.170035 NR_121577 NALT1 LINC01573|MIR4674HG|NALT|TCONS_l2_00029132 NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 ncRNA chr7-4602 chr7 20164859 20165069 + 5.89 0.000 intron (NM_182762, intron 2 of 6) intron (NM_182762, intron 2 of 6) 23048 NR_046756 100874041 Hs.145104 NR_046756 ENSG00000228598 MACC1-AS1 - MACC1 antisense RNA 1 ncRNA chr1-11912 chr1 54667748 54667958 + 5.89 0.000 intron (NM_001039464, intron 4 of 23) AluJr4|SINE|Alu 26067 NM_001039464 374977 Hs.412482 NM_198547 ENSG00000184313 MROH7 C1orf175|HEATR8 maestro heat like repeat family member 7 protein-coding chr2-6987 chr2 135596761 135596971 + 5.89 0.000 intron (NM_001282798, intron 1 of 25) L1ME3C|LINE|L1 10514 NM_001354199 23518 Hs.412462 NM_015361 ENSG00000048991 R3HDM1 R3HDM R3H domain containing 1 protein-coding chr12-3479 chr12 121774417 121774627 + 5.89 0.000 intron (NM_001080825, intron 9 of 11) intron (NM_001080825, intron 9 of 11) 19166 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr11-9811 chr11 71060021 71060231 + 5.89 0.000 intron (NM_012309, intron 8 of 24) MER20|DNA|hAT-Charlie 164670 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr7-9090 chr7 105618093 105618303 + 5.89 0.000 intron (NM_138495, intron 7 of 9) intron (NM_138495, intron 7 of 9) -36656 NM_001355527 100130771 Hs.719432 NM_001355526 ENSG00000185055 EFCAB10 - EF-hand calcium binding domain 10 protein-coding chrX-3749 chrX 125427844 125428054 + 5.89 0.000 Intergenic Intergenic 108078 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr12-4643 chr12 44607981 44608191 + 5.89 0.000 intron (NM_006159, intron 15 of 20) intron (NM_006159, intron 15 of 20) 267575 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr6-8291 chr6 143024539 143024749 + 5.89 0.000 intron (NR_038987, intron 1 of 2) intron (NR_038987, intron 1 of 2) 12938 NR_038987 100507489 Hs.486645 NR_038987 LINC01277 - long intergenic non-protein coding RNA 1277 ncRNA chr9-3246 chr9 6185084 6185294 + 5.89 0.000 Intergenic MER76|LTR|ERVL -29960 NM_001314047 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr14-5079 chr14 85017391 85017601 + 5.89 0.000 Intergenic MIRb|SINE|MIR -254436 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chrX-4839 chrX 103412166 103412376 + 5.89 0.000 Intergenic L1PREC2|LINE|L1 35233 NM_014380 27018 Hs.448588 NM_014380 ENSG00000166681 BEX3 Bex|DXS6984E|HGR74|NADE|NGFRAP1 brain expressed X-linked 3 protein-coding chrX-2593 chrX 105159773 105159983 + 5.89 0.000 intron (NM_017416, intron 2 of 10) MIR3|SINE|MIR 60815 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr17-2230 chr17 3371494 3371704 + 5.89 0.000 Intergenic SVA_D|Retroposon|SVA 26811 NM_003553 8387 NM_003553 ENSG00000180016 OR1E1 HGM071|OR13-66|OR17-2|OR17-32|OR1E5|OR1E6|OR1E8P|OR1E9P|OST547 olfactory receptor family 1 subfamily E member 1 protein-coding chr2-12454 chr2 59508548 59508758 + 5.89 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 290945 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr4-8749 chr4 186021266 186021476 + 5.89 0.000 Intergenic Intergenic -47784 NM_003265 7098 Hs.657724 NM_003265 ENSG00000164342 TLR3 CD283|IIAE2 toll like receptor 3 protein-coding chr5-4835 chr5 61679191 61679401 + 5.89 0.000 intron (NR_109910, intron 5 of 7) intron (NR_109910, intron 5 of 7) 19136 NR_109910 101928651 Hs.662309 NR_109910 ENSG00000248529 LOC101928651 - uncharacterized LOC101928651 ncRNA chr13-1922 chr13 69215305 69215515 + 5.89 0.000 Intergenic L1PA16|LINE|L1 -6936 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr10-1989 chr10 43844106 43844316 + 5.89 0.000 Intergenic Intergenic -1095 NR_033923 414260 Hs.351856 NR_033923 ENSG00000226808 LINC00619 C10orf136|bA168P8.1 long intergenic non-protein coding RNA 619 ncRNA chr2-14577 chr2 231700566 231700776 + 5.89 0.000 Intergenic Intergenic -7854 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr2-11675 chr2 7437770 7437980 + 5.89 0.000 intron (NR_038432, intron 4 of 5) intron (NR_038432, intron 4 of 5) 16614 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr2-11306 chr2 193888414 193888624 + 5.89 0.000 Intergenic L1MA2|LINE|L1 -455750 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr13-4337 chr13 102249018 102249228 + 5.89 0.000 intron (NM_001321940, intron 1 of 5) intron (NM_001321940, intron 1 of 5) 61563 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr7-9739 chr7 157654802 157655012 + 5.89 0.000 intron (NM_130843, intron 13 of 21) intron (NM_130843, intron 13 of 21) -80485 NR_029689 406945 NR_029689 ENSG00000207960 MIR153-2 MIRN153-2|mir-153-2 microRNA 153-2 ncRNA chr10-7853 chr10 46565777 46565987 + 5.89 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -9811 NM_014696 9721 Hs.523375 NM_014696 ENSG00000204175 GPRIN2 GRIN2|KIAA0514 G protein regulated inducer of neurite outgrowth 2 protein-coding chr16-6266 chr16 31133548 31133758 + 5.89 0.000 intron (NM_002773, intron 2 of 5) intron (NM_002773, intron 2 of 5) 2074 NM_002773 5652 Hs.75799 NM_002773 ENSG00000052344 PRSS8 CAP1|PROSTASIN serine protease 8 protein-coding chr2-14657 chr2 235895366 235895576 + 5.89 0.000 intron (NM_001037131, intron 10 of 17) L2b|LINE|L2 272915 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr3-10444 chr3 132637908 132638118 + 5.89 0.000 intron (NM_032169, intron 5 of 19) intron (NM_032169, intron 5 of 19) -16433 NM_198329 79876 Hs.170737 NM_024818 ENSG00000081307 UBA5 EIEE44|SCAR24|THIFP1|UBE1DC1 ubiquitin like modifier activating enzyme 5 protein-coding chr2-13522 chr2 151299903 151300113 + 5.89 0.000 Intergenic Intergenic -10340 NM_004688 9111 Hs.54483 NM_004688 ENSG00000123609 NMI - N-myc and STAT interactor protein-coding chr21-1770 chr21 36567102 36567312 + 5.89 0.000 intron (NM_001146077, intron 1 of 2) intron (NM_001146077, intron 1 of 2) 9362 NM_001146077 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr3-5587 chr3 7678898 7679108 + 5.89 0.000 intron (NM_000844, intron 8 of 9) intron (NM_000844, intron 8 of 9) -143719 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr2-10464 chr2 217090145 217090355 + 5.89 0.000 Intergenic LTR103_Mam|LTR|ERV1? -192483 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr4-7544 chr4 77052452 77052662 + 5.89 0.000 intron (NM_006835, intron 6 of 6) intron (NM_006835, intron 6 of 6) 22353 NM_001348133 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr3-10142 chr3 114409034 114409244 + 5.89 0.000 intron (NM_001348805, intron 7 of 10) (T)n|Simple_repeat|Simple_repeat -25497 NM_001164342 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr1-13302 chr1 234533901 234534111 + 5.89 0.000 Intergenic Intergenic -2227 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr19-4928 chr19 43563272 43563482 + 5.89 0.000 intron (NM_006297, intron 2 of 16) AluSz|SINE|Alu 12201 NM_006297 7515 Hs.98493 NM_006297 ENSG00000073050 XRCC1 RCC|SCAR26 X-ray repair cross complementing 1 protein-coding chr6-5677 chr6 108166299 108166509 + 5.89 0.000 5' UTR (NM_003269, exon 1 of 9) 5' UTR (NM_003269, exon 1 of 9) 382 NM_003269 7101 Hs.157688 NM_003269 ENSG00000112333 NR2E1 TLL|TLX|XTLL nuclear receptor subfamily 2 group E member 1 protein-coding chr6-6523 chr6 127400808 127401018 + 5.89 0.000 Intergenic Intergenic -57304 NM_001105545 55862 Hs.486410 NM_018479 ENSG00000093144 ECHDC1 HEL-S-76|MMCD|dJ351K20.2 ethylmalonyl-CoA decarboxylase 1 protein-coding chr15-3186 chr15 70260703 70260913 + 5.89 0.000 Intergenic Intergenic -162891 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr19-6900 chr19 45527757 45527967 + 5.89 0.000 TTS (NM_003370) TTS (NM_003370) 20383 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr18-3038 chr18 27668910 27669120 + 5.89 0.000 Intergenic Intergenic -326359 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr2-14356 chr2 218825205 218825415 + 5.89 0.000 intron (NM_017431, intron 10 of 13) AluSx3|SINE|Alu 2220 NR_128707 103504730 NR_128707 ENSG00000283639 MIR9500 hsa-mir-9500 microRNA 9500 ncRNA chr11-9100 chr11 32077277 32077487 + 5.89 0.000 Intergenic L2|LINE|L2 -13692 NM_002901 5954 Hs.97887 NM_002901 ENSG00000049449 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1 protein-coding chr5-5671 chr5 159628986 159629196 + 5.89 0.000 Intergenic L2c|LINE|L2 -162815 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr5-4810 chr5 58639405 58639615 + 5.89 0.000 intron (NM_138453, intron 2 of 4) MLT1A|LTR|ERVL-MaLR 56435 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr2-12333 chr2 48071282 48071492 + 5.89 0.000 Intergenic Intergenic -165594 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr19-3958 chr19 562678 562888 + 5.89 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -8500 NM_198591 682 Hs.501293 NM_001728 ENSG00000172270 BSG 5F7|CD147|EMMPRIN|EMPRIN|OK|SLC7A11|TCSF basigin (Ok blood group) protein-coding chr1-11830 chr1 31999864 32000074 + 5.89 0.000 Intergenic Intergenic -13899 NR_073498 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr15-4510 chr15 52252980 52253190 + 5.89 0.000 intron (NM_018728, intron 12 of 40) intron (NM_018728, intron 12 of 40) 24115 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr16-5225 chr16 28629369 28629579 + 5.89 0.000 Intergenic Intergenic -5888 NM_177536 6817 Hs.567342 NM_001055 ENSG00000196502 SULT1A1 HAST1/HAST2|P-PST|PST|ST1A1|ST1A3|STP|STP1|TSPST1 sulfotransferase family 1A member 1 protein-coding chr14-4553 chr14 44607649 44607859 + 5.89 0.000 Intergenic Intergenic 100345 NR_135257 105370473 Hs.180134 NR_135257 ENSG00000258747 LOC105370473 - uncharacterized LOC105370473 ncRNA chr7-8659 chr7 71517950 71518160 + 5.89 0.000 intron (NM_022479, intron 5 of 10) L2a|LINE|L2 -210285 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chrX-4454 chrX 56545279 56545489 + 5.89 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -18209 NM_013444 29978 Hs.179309 NM_013444 ENSG00000188021 UBQLN2 ALS15|CHAP1|DSK2|HRIHFB2157|N4BP4|PLIC2 ubiquilin 2 protein-coding chr16-3767 chr16 27841680 27841890 + 5.89 0.000 intron (NM_001109763, intron 4 of 6) intron (NM_001109763, intron 4 of 6) 46372 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr14-5236 chr14 98963629 98963839 + 5.89 0.000 Intergenic Intergenic 252121 NR_161368 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr14-4024 chr14 48353320 48353530 + 5.89 0.000 Intergenic Intergenic -558411 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr14-4412 chr14 31011107 31011317 + 5.89 0.000 intron (NM_001083893, intron 1 of 17) intron (NM_001083893, intron 1 of 17) 3530 NR_030354 693209 NR_030354 ENSG00000207952 MIR624 MIRN624|hsa-mir-624|mir-624 microRNA 624 ncRNA chr1-16564 chr1 234500887 234501097 + 5.89 0.000 Intergenic Intergenic -21813 NM_005646 6894 Hs.498115 NM_005646 ENSG00000059588 TARBP1 TRM3|TRMT3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding chr3-11204 chr3 193935586 193935796 + 5.89 0.000 Intergenic Intergenic 58547 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo chrX-3969 chrX 13044217 13044427 + 5.89 0.000 intron (NM_174901, intron 1 of 7) intron (NM_174901, intron 1 of 7) 298 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chr2-14038 chr2 194428404 194428614 + 5.89 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 84240 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr2-8423 chr2 119074351 119074561 + 5.89 0.000 Intergenic L1ME3|LINE|L1 84295 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr11-7556 chr11 18677640 18677850 + 5.89 0.000 Intergenic MIRb|SINE|MIR -21034 NM_153347 144110 Hs.502100 NM_153347 ENSG00000151117 TMEM86A - transmembrane protein 86A protein-coding chr11-3133 chr11 45611026 45611236 + 5.89 0.000 Intergenic Intergenic 54491 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr7-7470 chr7 93333599 93333809 + 5.89 0.000 intron (NM_001257998, intron 22 of 28) intron (NM_001257998, intron 22 of 28) 101338 NM_017667 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr9-8172 chr9 105942721 105942931 + 5.89 0.000 Intergenic Intergenic 248285 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr12-5944 chr12 77672383 77672593 + 5.89 0.000 Intergenic L1PB1|LINE|L1 -158406 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr3-9816 chr3 74117841 74118051 + 5.89 0.000 Intergenic Intergenic 308702 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr17-7534 chr17 17904715 17904925 + 5.89 0.000 intron (NM_001288787, intron 2 of 13) intron (NM_001288787, intron 2 of 13) 67580 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr10-5293 chr10 69737392 69737602 + 5.89 0.000 Intergenic Intergenic -64409 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr17-5278 chr17 20569878 20570088 + 5.89 0.000 Intergenic Intergenic -9741 NM_001190790 256223 Hs.131916 NM_001190790 ENSG00000214819 CDRT15L2 - CMT1A duplicated region transcript 15 like 2 protein-coding chr1-15652 chr1 164295763 164295973 + 5.89 0.000 Intergenic Intergenic -263492 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr7-8558 chr7 57294920 57295130 + 5.89 0.000 Intergenic AluJb|SINE|Alu -72851 NR_136269 105375297 Hs.586309 NR_136269 ENSG00000234089 LOC105375297 - uncharacterized LOC105375297 ncRNA chr20-3721 chr20 17026323 17026533 + 5.89 0.000 Intergenic Intergenic -199679 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr6-6397 chr6 82013799 82014009 + 5.89 0.000 intron (NR_149135, intron 3 of 3) intron (NR_149135, intron 3 of 3) -75483 NR_149134 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr9-3688 chr9 101484981 101485191 + 5.89 0.000 intron (NM_001303107, intron 1 of 2) intron (NM_001303107, intron 1 of 2) 1382 NM_001371233 chr13-3825 chr13 47459553 47459763 + 5.89 0.000 Intergenic Intergenic 472964 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr1-11919 chr1 55075423 55075633 + 5.89 0.000 intron (NM_015306, intron 62 of 67) intron (NM_015306, intron 62 of 67) 35306 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr11-4893 chr11 56975312 56975522 + 5.89 0.000 Intergenic Intergenic -13497 NM_001005323 390181 Hs.554520 NM_001005323 ENSG00000181273 OR5AK2 - olfactory receptor family 5 subfamily AK member 2 protein-coding chr5-7560 chr5 39394262 39394472 + 5.89 0.000 5' UTR (NM_001244871, exon 2 of 14) 5' UTR (NM_001244871, exon 2 of 14) -29872 NM_001737 735 Hs.654443 NM_001737 ENSG00000113600 C9 ARMD15|C9D complement C9 protein-coding chr12-7849 chr12 103631792 103632002 + 5.89 0.000 intron (NM_017564, intron 6 of 68) A-rich|Low_complexity|Low_complexity 44624 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chr2-10800 chr2 46194904 46195114 + 5.89 0.000 Intergenic MER115|DNA|hAT-Tip100 -102398 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr11-7739 chr11 74486401 74486611 + 5.89 0.000 Intergenic Intergenic -6879 NM_001319240 100287896 Hs.591971 NM_198519 LOC100287896 - uncharacterized LOC100287896 protein-coding chr3-7155 chr3 185980014 185980224 + 5.89 0.000 non-coding (NR_151491, exon 4 of 4) non-coding (NR_151491, exon 4 of 4) 20176 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr11-8963 chr11 20191117 20191327 + 5.89 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -30747 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr5-7556 chr5 39328765 39328975 + 5.89 0.000 intron (NM_001737, intron 5 of 10) intron (NM_001737, intron 5 of 10) 35625 NM_001737 735 Hs.654443 NM_001737 ENSG00000113600 C9 ARMD15|C9D complement C9 protein-coding chr6-3528 chr6 37314975 37315185 + 5.89 0.000 intron (NR_130108, intron 10 of 12) intron (NR_130108, intron 10 of 12) -38903 NM_003958 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr21-1155 chr21 41458186 41458396 + 5.89 0.000 intron (NM_001144925, intron 18 of 18) intron (NM_001144925, intron 18 of 18) 26241 NM_001282920 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding chr2-14009 chr2 191148792 191149002 + 5.89 0.000 intron (NM_001243835, intron 1 of 23) intron (NM_001243835, intron 1 of 23) 2097 NM_003151 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr2-11842 chr2 19851178 19851388 + 5.89 0.000 Intergenic Intergenic -17571 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr20-3112 chr20 31856119 31856329 + 5.89 0.000 intron (NM_001320479, intron 6 of 9) L2c|LINE|L2 -10620 NM_004118 2307 Hs.516971 NM_004118 ENSG00000179772 FOXS1 FKHL18|FREAC10 forkhead box S1 protein-coding chr4-7678 chr4 87339175 87339385 + 5.89 0.000 intron (NM_016245, intron 6 of 6) intron (NM_016245, intron 6 of 6) -16398 NM_001136230 345275 Hs.284414 NM_178135 ENSG00000170509 HSD17B13 HMFN0376|NIIL497|SCDR9|SDR16C3 hydroxysteroid 17-beta dehydrogenase 13 protein-coding chr10-7577 chr10 18140610 18140820 + 5.89 0.000 5' UTR (NM_201572, exon 1 of 14) 5' UTR (NM_201572, exon 1 of 14) 291 NM_201572 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr6-6036 chr6 124019888 124020098 + 5.89 0.000 intron (NM_001040214, intron 1 of 6) intron (NM_001040214, intron 1 of 6) 216128 NM_001040214 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr1-9805 chr1 59016626 59016836 + 5.89 0.000 Intergenic AluSx|SINE|Alu -3745 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr12-7781 chr12 96389721 96389931 + 5.89 0.000 intron (NM_002595, intron 1 of 16) AluSc5|SINE|Alu 10613 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr10-8238 chr10 74061188 74061398 + 5.89 0.000 intron (NM_014000, intron 2 of 21) intron (NM_014000, intron 2 of 21) 63177 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr12-6177 chr12 13662705 13662915 + 5.89 0.000 intron (NM_000834, intron 4 of 12) intron (NM_000834, intron 4 of 12) -286065 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr19-6476 chr19 17420660 17420870 + 5.89 0.000 intron (NM_001304547, intron 4 of 9) intron (NM_001304547, intron 4 of 9) 718 NM_138401 93343 Hs.515243 NM_138401 ENSG00000141971 MVB12A CFBP|FAM125A multivesicular body subunit 12A protein-coding chr3-5245 chr3 104290910 104291120 + 5.89 0.000 Intergenic MER65-int|LTR|ERV1 -766899 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr13-3206 chr13 20092934 20093144 + 5.89 0.000 Intergenic Intergenic -9662 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr3-10668 chr3 150216693 150216903 + 5.89 0.000 Intergenic Intergenic -21721 NR_110168 101927992 Hs.534682 NR_110167 ENSG00000244541 LINC01213 - long intergenic non-protein coding RNA 1213 ncRNA chr14-5054 chr14 81548215 81548425 + 5.89 0.000 Intergenic L1PA7|LINE|L1 -14459 NM_001244984 6400 Hs.181300 NM_005065 ENSG00000071537 SEL1L Hrd3|PRO1063|SEL1-LIKE|SEL1L1 SEL1L adaptor subunit of ERAD E3 ubiquitin ligase protein-coding chr6-6478 chr6 111170040 111170250 + 5.89 0.000 intron (NM_018593, intron 1 of 5) AluSx|SINE|Alu 56311 NR_145796 109623478 NR_145796 SNORD166 - small nucleolar RNA, C/D box 166 snoRNA chr5-6174 chr5 57567342 57567552 + 5.89 0.000 Intergenic Intergenic -2895 NR_120607 100996645 Hs.582496 NR_120607 LINCR-0003 - uncharacterized LincR-0003 ncRNA chr11-9181 chr11 35770489 35770699 + 5.89 0.000 intron (NM_017583, intron 4 of 4) L1PA16|LINE|L1 107819 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr15-1858 chr15 58865253 58865463 + 5.89 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 68321 NR_135042 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr9-4927 chr9 12904802 12905012 + 5.89 0.000 Intergenic Intergenic 67726 NR_132976 106635615 NR_132976 SNORD137 - small nucleolar RNA, C/D box 137 snoRNA chr8-6724 chr8 87041418 87041628 + 5.89 0.000 intron (NM_173538, intron 4 of 10) L2a|LINE|L2 175108 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr3-7591 chr3 10853143 10853353 + 5.89 0.000 intron (NM_014229, intron 5 of 13) intron (NM_014229, intron 5 of 13) 37020 NM_001317406 6538 Hs.655078 NM_014229 ENSG00000132164 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 member 11 protein-coding chr19-6422 chr19 15264258 15264468 + 5.89 0.000 intron (NM_001330384, intron 6 of 11) intron (NM_001330384, intron 6 of 11) 16088 NM_014299 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr3-9989 chr3 99429849 99430059 + 5.89 0.000 Intergenic Intergenic -208640 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr15-4696 chr15 66538925 66539135 + 5.89 0.000 intron (NM_001287823, intron 15 of 17) L2c|LINE|L2 26467 NM_207338 197021 Hs.680983 NM_207338 ENSG00000188501 LCTL KLG|KLPH lactase like protein-coding chr6-4417 chr6 28028502 28028712 + 5.89 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -44709 NM_001355425 442179 NM_001355425 OR1F12 OR1F12P|OR1F12Q|OR6-12|hs6M1-35P olfactory receptor family 1 subfamily F member 12 protein-coding chr4-5833 chr4 103679903 103680113 + 5.89 0.000 intron (NM_001059, intron 1 of 4) intron (NM_001059, intron 1 of 4) 39977 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr10-4310 chr10 16436844 16437054 + 5.89 0.000 promoter-TSS (NM_001001484) promoter-TSS (NM_001001484) 6 NM_030664 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr2-12106 chr2 34300463 34300673 + 5.89 0.000 Intergenic L1PA6|LINE|L1 233342 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr15-4522 chr15 53959088 53959298 + 5.89 0.000 Intergenic L1MA4|LINE|L1 -19248 NM_001329919 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr1-15517 chr1 156551403 156551613 + 5.89 0.000 intron (NM_178229, intron 15 of 37) MIRc|SINE|MIR 21057 NM_178229 128239 Hs.591495 NM_178229 ENSG00000183856 IQGAP3 - IQ motif containing GTPase activating protein 3 protein-coding chr1-16638 chr1 239994244 239994454 + 5.89 0.000 Intergenic L1ME2z|LINE|L1 -13175 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chrX-3008 chrX 52176739 52176949 + 5.89 0.000 Intergenic L1PA5|LINE|L1 -7979 NM_001242362 81557 Hs.522650 NM_030801 ENSG00000187243 MAGED4B - MAGE family member D4B protein-coding chr10-5316 chr10 70937514 70937724 + 5.89 0.000 Intergenic Intergenic -1434 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr5-2805 chr5 10546293 10546503 + 5.89 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -17672 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr2-11240 chr2 168443854 168444064 + 5.89 0.000 Intergenic Intergenic -12313 NM_203463 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr6-5468 chr6 159943041 159943251 + 5.89 0.000 Intergenic Intergenic -25953 NM_000876 3482 Hs.487062 NM_000876 ENSG00000197081 IGF2R CD222|CI-M6PR|CIMPR|M6P-R|M6P/IGF2R|MPR 300|MPR1|MPR300|MPRI insulin like growth factor 2 receptor protein-coding chr16-3489 chr16 3101582 3101792 + 5.89 0.000 Intergenic MER33|DNA|hAT-Charlie -2393 NM_032805 84891 Hs.334515 NM_032805 ENSG00000130182 ZSCAN10 ZFP206|ZNF206 zinc finger and SCAN domain containing 10 protein-coding chr5-6834 chr5 111178984 111179194 + 5.89 0.000 Intergenic L1PB1|LINE|L1 -44494 NM_001323375 814 Hs.438801 NM_001744 ENSG00000152495 CAMK4 CaMK IV|CaMK-GR|CaMKIV|caMK calcium/calmodulin dependent protein kinase IV protein-coding chr4-7353 chr4 57490604 57490814 + 5.89 0.000 Intergenic Intergenic 64837 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr17-4832 chr17 58474822 58475032 + 5.89 0.000 intron (NM_001080439, intron 2 of 5) intron (NM_001080439, intron 2 of 5) 13481 NM_001080439 124535 Hs.380061 NM_001080439 ENSG00000176160 HSF5 HSF 5|HSTF 5 heat shock transcription factor 5 protein-coding chr11-6028 chr11 26071637 26071847 + 5.89 0.000 Intergenic Intergenic -117381 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr9-7898 chr9 88382085 88382295 + 5.89 0.000 Intergenic Intergenic -6254 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr1-8423 chr1 90091101 90091311 + 5.89 0.000 Intergenic Intergenic 96096 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr7-6659 chr7 134406267 134406477 + 5.89 0.000 Intergenic Intergenic 52728 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr7-6405 chr7 154756603 154756813 + 5.89 0.000 intron (NR_157196, intron 8 of 25) intron (NR_157196, intron 8 of 25) -171809 NR_024476 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr9-7805 chr9 80630425 80630635 + 5.89 0.000 Intergenic LTR8|LTR|ERV1 655507 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr5-5260 chr5 121174355 121174565 + 5.89 0.000 Intergenic L1PB4|LINE|L1 -148090 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr5-7509 chr5 35919461 35919671 + 5.89 0.000 intron (NM_001042625, intron 2 of 4) intron (NM_001042625, intron 2 of 4) 19056 NM_001042625 133690 Hs.55150 NM_144647 ENSG00000152611 CAPSL - calcyphosine like protein-coding chr8-5691 chr8 124436101 124436311 + 5.89 0.000 Intergenic MIRb|SINE|MIR -14614 NM_017956 55039 Hs.9925 NM_017956 ENSG00000183665 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog protein-coding chr6-4245 chr6 6995255 6995465 + 5.89 0.000 Intergenic MIR|SINE|MIR -112383 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr10-6907 chr10 46191126 46191336 + 5.89 0.000 Intergenic L1MB1|LINE|L1 78377 NR_103827 100996567 Hs.546758 NR_103827 ANTXRLP1 - ANTXR like pseudogene 1 pseudo chr3-2519 chr3 15162846 15163056 + 5.89 0.000 Intergenic SVA_D|Retroposon|SVA 43008 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen type VI alpha 4 pseudogene 1 pseudo chr6-3553 chr6 44789417 44789627 + 5.89 0.000 Intergenic Intergenic -237641 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr3-7680 chr3 40723379 40723589 + 5.89 0.000 Intergenic Charlie5|DNA|hAT-Charlie 198524 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr6-3328 chr6 1027450 1027660 + 5.89 0.000 intron (NR_027116, intron 1 of 3) intron (NR_027116, intron 1 of 3) 73777 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr13-4266 chr13 97659529 97659739 + 5.89 0.000 Intergenic Intergenic 225465 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr9-5391 chr9 92939150 92939360 + 5.89 0.000 Intergenic AluY|SINE|Alu -8268 NM_001083536 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr11-6659 chr11 75910795 75911005 + 5.89 0.000 intron (NM_003369, intron 5 of 14) Tigger16b|DNA|TcMar-Tigger 95690 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr2-10242 chr2 113373657 113373867 + 5.89 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -63929 NM_001330342 150472 Hs.531330 NM_172003 ENSG00000136682 CBWD2 - COBW domain containing 2 protein-coding chr2-14051 chr2 195968143 195968353 + 5.89 0.000 intron (NM_018897, intron 17 of 64) L1MA3|LINE|L1 100589 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr16-6577 chr16 66479875 66480085 + 5.89 0.000 intron (NM_001197225, intron 3 of 4) MamGypLTR3a|LTR|Gypsy -3578 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr7-9486 chr7 136183546 136183756 + 5.89 0.000 Intergenic Intergenic -206292 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr8-3011 chr8 119776471 119776681 + 5.89 0.000 intron (NM_003184, intron 18 of 25) AluY|SINE|Alu 56265 NM_003184 6873 Hs.122752 NM_003184 ENSG00000064313 TAF2 CIF150|MRT40|TAF2B|TAFII150 TATA-box binding protein associated factor 2 protein-coding chr10-4771 chr10 4695741 4695951 + 5.89 0.000 Intergenic Intergenic -17776 NR_024475 100216001 Hs.634869 NR_024475 ENSG00000231298 MANCR LINC00704 mitotically associated long non coding RNA ncRNA chr22-4026 chr22 40780648 40780858 + 5.89 0.000 intron (NR_104235, intron 5 of 10) intron (NR_104235, intron 5 of 10) 33205 NR_039923 100616283 NR_039923 ENSG00000266594 MIR4766 mir-4766 microRNA 4766 ncRNA chr2-11501 chr2 236061779 236061989 + 5.89 0.000 intron (NM_001037131, intron 16 of 17) intron (NM_001037131, intron 16 of 17) 106502 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr7-8903 chr7 93462201 93462411 + 5.89 0.000 intron (NM_001164737, intron 8 of 15) intron (NM_001164737, intron 8 of 15) 20549 NR_030388 724023 NR_030388 ENSG00000208014 MIR653 MIRN653|hsa-mir-653|mir-653 microRNA 653 ncRNA chr13-4363 chr13 106251318 106251528 + 5.89 0.000 Intergenic Charlie2b|DNA|hAT-Charlie -125141 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr11-10171 chr11 93848416 93848626 + 5.89 0.000 intron (NM_001144871, intron 1 of 3) intron (NM_001144871, intron 1 of 3) 2097 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chrX-5342 chrX 148267156 148267366 + 5.89 0.000 Intergenic L1PA8|LINE|L1 -233356 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr6-7708 chr6 88002486 88002696 + 5.89 0.000 Intergenic Intergenic -45250 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr10-8802 chr10 107657258 107657468 + 5.89 0.000 Intergenic MER91A|DNA|hAT-Tip100 411930 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr11-7019 chr11 117901744 117901954 + 5.89 0.000 3' UTR (NM_001206789, exon 12 of 12) 3' UTR (NM_001206789, exon 12 of 12) -24419 NM_001164831 53826 Hs.744850 NM_022003 ENSG00000137726 FXYD6 - FXYD domain containing ion transport regulator 6 protein-coding chr17-7566 chr17 19747873 19748083 + 5.89 0.000 intron (NM_000691, intron 1 of 10) MIRb|SINE|MIR 320 NM_001330150 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr2-6957 chr2 121197247 121197457 + 5.89 0.000 Intergenic MIRc|SINE|MIR 87850 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chrX-4598 chrX 73175238 73175448 + 5.89 0.000 Intergenic L1PB1|LINE|L1 39508 NM_021963 4674 Hs.66180 NM_021963 ENSG00000186462 NAP1L2 BPX nucleosome assembly protein 1 like 2 protein-coding chr2-14474 chr2 224873954 224874164 + 5.89 0.000 exon (NM_001363762, exon 11 of 56) exon (NM_001363762, exon 11 of 56) 72990 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr10-4256 chr10 133561076 133561286 + 5.89 0.000 intron (NM_130784, intron 1 of 12) MER4A1|LTR|ERV1 4402 NM_001143764 93426 Hs.553795 NM_130784 ENSG00000171772 SYCE1 C10orf94|CT76|POF12|SPGF15 synaptonemal complex central element protein 1 protein-coding chr16-6866 chr16 83996832 83997042 + 5.89 0.000 intron (NM_001329748, intron 8 of 11) intron (NM_001329748, intron 8 of 11) 28289 NM_001329749 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr5-7313 chr5 15600082 15600292 + 5.89 0.000 intron (NM_001278317, intron 1 of 3) MER72|LTR|ERV1 14815 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr17-7295 chr17 3974536 3974746 + 5.89 0.000 Intergenic Intergenic -2462 NR_146884 105371496 Hs.579239 NR_146884 LINC01975 - long intergenic non-protein coding RNA 1975 ncRNA chr6-5903 chr6 45838275 45838485 + 5.89 0.000 Intergenic L2a|LINE|L2 99217 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr6-6142 chr6 167494938 167495148 + 5.89 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -22253 NR_134591 105378127 Hs.58456 NR_134591 LOC105378127 - uncharacterized LOC105378127 ncRNA chr4-6833 chr4 8252261 8252471 + 5.89 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -17388 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr10-6728 chr10 127101139 127101349 + 5.89 0.000 intron (NM_001290223, intron 23 of 51) intron (NM_001290223, intron 23 of 51) 95347 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr1-14358 chr1 41821768 41821978 + 5.89 0.000 intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 97049 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr13-4257 chr13 97381104 97381314 + 5.89 0.000 intron (NM_144778, intron 8 of 8) intron (NM_144778, intron 8 of 8) -52960 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chrX-4170 chrX 32357338 32357548 + 5.89 0.000 intron (NM_000109, intron 37 of 78) MER5A|DNA|hAT-Charlie 54785 NM_004011 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr8-6906 chr8 102178288 102178498 + 5.89 0.000 Intergenic Intergenic 52961 NR_049859 100847001 NR_049859 ENSG00000266756 MIR5680 - microRNA 5680 ncRNA chr15-2487 chr15 99297308 99297518 + 5.89 0.000 intron (NM_001321677, intron 5 of 8) AluJr|SINE|Alu 39888 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr15-4514 chr15 52504689 52504899 + 5.89 0.000 intron (NM_001142495, intron 1 of 39) AluSg7|SINE|Alu 24086 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr3-8995 chr3 17881767 17881977 + 5.89 0.000 Intergenic LTR16D|LTR|ERVL -80680 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr6-7316 chr6 44508892 44509102 + 5.89 0.000 Intergenic Intergenic 42884 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr1-9496 chr1 37263489 37263699 + 5.89 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 102031 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr11-8658 chr11 3474711 3474921 + 5.89 0.000 Intergenic HERVE-int|LTR|ERV1 -82901 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr5-7698 chr5 56812008 56812218 + 5.89 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -3436 NM_005921 4214 Hs.653654 NM_005921 ENSG00000095015 MAP3K1 MAPKKK1|MEKK|MEKK 1|MEKK1|SRXY6 mitogen-activated protein kinase kinase kinase 1 protein-coding chr15-5199 chr15 94351694 94351904 + 5.89 0.000 intron (NM_018349, intron 7 of 21) intron (NM_018349, intron 7 of 21) -4131 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr21-910 chr21 27929321 27929531 + 5.89 0.000 Intergenic Intergenic -83937 NR_027246 246705 Hs.505079 NM_145180 ENSG00000178457 LINC00314 C21orf94|NCRNA00314 long intergenic non-protein coding RNA 314 ncRNA chr19-5785 chr19 32814146 32814356 + 5.89 0.000 intron (NM_001366102, intron 25 of 32) intron (NM_001366102, intron 25 of 32) 55516 NM_001126335 11136 Hs.743345 NM_014270 ENSG00000021488 SLC7A9 BAT1|CSNU3 solute carrier family 7 member 9 protein-coding chrX-3727 chrX 119115074 119115284 + 5.89 0.000 intron (NM_020721, intron 4 of 13) intron (NM_020721, intron 4 of 13) 35400 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr2-7575 chr2 25138558 25138768 + 5.89 0.000 intron (NM_014971, intron 15 of 22) intron (NM_014971, intron 15 of 22) 29917 NM_001319205 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr1-15449 chr1 154151542 154151752 + 5.89 0.000 intron (NM_001159484, intron 2 of 37) Kanga1b|DNA|TcMar-Tc2 3469 NM_001159484 91181 Hs.67639 NM_207308 ENSG00000143552 NUP210L - nucleoporin 210 like protein-coding chr13-3675 chr13 34207784 34207994 + 5.89 0.000 Intergenic Charlie18a|DNA|hAT-Charlie -140154 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr16-5222 chr16 27856732 27856942 + 5.89 0.000 intron (NM_001323901, intron 2 of 5) intron (NM_001323901, intron 2 of 5) 31320 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr12-6004 chr12 101876766 101876976 + 5.89 0.000 promoter-TSS (NM_018370) promoter-TSS (NM_018370) -709 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr13-4485 chr13 113515475 113515685 + 5.89 0.000 intron (NR_146222, intron 7 of 11) intron (NR_146222, intron 7 of 11) 24559 NM_017905 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr19-6737 chr19 38452694 38452904 + 5.89 0.000 intron (NM_001042723, intron 12 of 104) CpG 19099 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr14-4728 chr14 60401482 60401692 + 5.89 0.000 Intergenic Intergenic 78391 NR_146481 101927729 NR_146481 ENSG00000258556 LINC02322 - long intergenic non-protein coding RNA 2322 ncRNA chr20-4300 chr20 51020500 51020710 + 5.89 0.000 intron (NM_002237, intron 1 of 2) intron (NM_002237, intron 1 of 2) 2502 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr2-7535 chr2 22327865 22328075 + 5.89 0.000 Intergenic Intergenic -208509 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr16-6580 chr16 66569866 66570076 + 5.89 0.000 exon (NM_181270, exon 2 of 4) exon (NM_181270, exon 2 of 4) 3532 NM_181269 113540 Hs.15159 NM_052999 ENSG00000089505 CMTM1 CKLFH|CKLFH1|CKLFSF1 CKLF like MARVEL transmembrane domain containing 1 protein-coding chr11-9085 chr11 31132995 31133205 + 5.89 0.000 intron (NM_001367979, intron 10 of 38) intron (NM_001367979, intron 10 of 38) -140414 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chrX-2315 chrX 55120316 55120526 + 5.89 0.000 Intergenic Intergenic 31403 NM_207339 203569 Hs.662489 NM_207339 ENSG00000234068 PAGE2 CT16.4|GAGEC2|GAGEE2|PAGE-2 PAGE family member 2 protein-coding chr11-9837 chr11 72552415 72552625 + 5.89 0.000 Intergenic Intergenic -18136 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr8-4506 chr8 120095251 120095461 + 5.89 0.000 Intergenic AluSx|SINE|Alu -29746 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr8-3428 chr8 76168786 76168996 + 5.89 0.000 Intergenic AluSg|SINE|Alu -237763 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr2-9494 chr2 236418300 236418510 + 5.89 0.000 intron (NM_001270584, intron 7 of 17) intron (NM_001270584, intron 7 of 17) 85292 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr8-6470 chr8 62062745 62062955 + 5.89 0.000 Intergenic L1M1|LINE|L1 173011 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr6-2435 chr6 161503470 161503680 + 5.89 0.000 intron (NM_004562, intron 9 of 11) MIR|SINE|MIR 32598 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr10-7317 chr10 133324819 133325029 + 5.89 0.000 3' UTR (NM_015722, exon 6 of 6) 3' UTR (NM_015722, exon 6 of 6) 11972 NM_015722 50632 Hs.148680 NM_015722 ENSG00000130643 CALY DRD1IP|NSG3 calcyon neuron specific vesicular protein protein-coding chr17-8404 chr17 75654732 75654942 + 5.89 0.000 intron (NM_001003716, intron 7 of 7) AluJr|SINE|Alu 8586 NM_001162997 100130933 Hs.662541 NM_001162997 ENSG00000259120 SMIM6 C17orf110|ELN small integral membrane protein 6 protein-coding chr8-7409 chr8 139982797 139983007 + 5.89 0.000 intron (NM_001160372, intron 19 of 22) intron (NM_001160372, intron 19 of 22) 117633 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr12-8260 chr12 124820642 124820852 + 5.89 0.000 intron (NR_160424, intron 1 of 11) L1MA10|LINE|L1 18924 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr13-2243 chr13 25352577 25352787 + 5.89 0.000 Intergenic L2a|LINE|L2 -19292 NM_016529 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr19-3296 chr19 4212507 4212717 + 5.89 0.000 exon (NM_133475, exon 15 of 22) exon (NM_133475, exon 15 of 22) -16911 NM_005755 10148 Hs.501452 NM_005755 ENSG00000105246 EBI3 IL-27B|IL27B|IL35B Epstein-Barr virus induced 3 protein-coding chr6-6360 chr6 63687436 63687646 + 5.89 0.000 intron (NM_001370349, intron 3 of 14) intron (NM_001370349, intron 3 of 14) 41015 NM_015153 23469 Hs.348921 NM_015153 ENSG00000118482 PHF3 - PHD finger protein 3 protein-coding chr9-7926 chr9 89634714 89634924 + 5.89 0.000 Intergenic Intergenic -4964 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr11-10609 chr11 124561115 124561325 + 5.89 0.000 Intergenic LTR42|LTR|ERVL -8777 NM_001005194 390275 Hs.632104 NM_001005194 ENSG00000196119 OR8A1 OR11-318|OST025 olfactory receptor family 8 subfamily A member 1 protein-coding chr4-6401 chr4 119828878 119829088 + 5.89 0.000 Intergenic Intergenic -24468 NR_110660 101927007 Hs.143958 NR_110660 ENSG00000250772 LINC01365 - long intergenic non-protein coding RNA 1365 ncRNA chr10-6611 chr10 93152153 93152363 + 5.89 0.000 Intergenic Intergenic 78365 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr11-10358 chr11 111317148 111317358 + 5.89 0.000 Intergenic L1PB1|LINE|L1 -12205 NM_001302644 399948 Hs.729225 NM_207429 COLCA1 C11orf92|CASC12|LOH11CR1F colorectal cancer associated 1 protein-coding chr13-4014 chr13 71537336 71537546 + 5.89 0.000 intron (NM_004392, intron 2 of 6) L2a|LINE|L2 329751 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr7-2164 chr7 64718129 64718339 + 5.89 0.000 Intergenic SVA_D|Retroposon|SVA 39170 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA chr2-13221 chr2 122990200 122990410 + 5.89 0.000 Intergenic MER52A|LTR|ERV1 83176 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr14-4459 chr14 33922334 33922544 + 5.89 0.000 Intergenic Intergenic 28635 NM_001308103 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr14-2892 chr14 36070518 36070728 + 5.89 0.000 non-coding (NR_073454, exon 1 of 3) non-coding (NR_073454, exon 1 of 3) 196 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chr15-2804 chr15 37713540 37713750 + 5.89 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -220962 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr4-8085 chr4 123481092 123481302 + 5.89 0.000 Intergenic Intergenic 81657 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr15-4563 chr15 57849786 57849996 + 5.89 0.000 Intergenic MER45B|DNA|hAT-Tip100 143177 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr5-8218 chr5 108601980 108602190 + 5.89 0.000 Intergenic L1MC4|LINE|L1 126176 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr10-8023 chr10 63156484 63156694 + 5.89 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 23261 NM_030759 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr19-6716 chr19 37803229 37803439 + 5.89 0.000 Intergenic Intergenic -14077 NR_040013 644554 Hs.683930 NR_040013 LOC644554 - uncharacterized LOC644554 ncRNA chr15-3808 chr15 73084685 73084895 + 5.89 0.000 intron (NM_002499, intron 1 of 28) (TG)n|Simple_repeat|Simple_repeat 32306 NM_001172624 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr8-6862 chr8 100177988 100178198 + 5.89 0.000 intron (NM_003114, intron 4 of 18) intron (NM_003114, intron 4 of 18) 19758 NM_003114 6674 Hs.591866 NM_003114 ENSG00000104450 SPAG1 CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS sperm associated antigen 1 protein-coding chr2-14470 chr2 224343075 224343285 + 5.89 0.000 Intergenic Intergenic 58814 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chrX-4825 chrX 102076398 102076608 + 5.89 0.000 Intergenic L1PA13|LINE|L1 -49176 NM_080390 140597 Hs.401835 NM_080390 ENSG00000184905 TCEAL2 MY0876G05|WEX1|my048 transcription elongation factor A like 2 protein-coding chr9-8379 chr9 118323726 118323936 + 5.89 0.000 Intergenic Intergenic -355840 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chrX-4663 chrX 81336678 81336888 + 5.89 0.000 Intergenic L1PREC2|LINE|L1 134681 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr18-3291 chr18 53523848 53524058 + 5.89 0.000 intron (NM_005215, intron 27 of 28) intron (NM_005215, intron 27 of 28) -44494 NR_110798 102724651 Hs.123442 NR_110798 ENSG00000263438 LINC01919 - long intergenic non-protein coding RNA 1919 ncRNA chr9-6089 chr9 137522910 137523120 + 5.89 0.000 intron (NM_001098537, intron 8 of 34) intron (NM_001098537, intron 8 of 34) 27387 NM_001098537 375775 Hs.294147 NM_152286 ENSG00000130653 PNPLA7 C9orf111|NTE-R1|NTEL1 patatin like phospholipase domain containing 7 protein-coding chr3-11036 chr3 182749239 182749449 + 5.89 0.000 Intergenic AluSg|SINE|Alu -44160 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr12-8147 chr12 120799511 120799721 + 5.89 0.000 intron (NM_139015, intron 2 of 10) L4_A_Mam|LINE|RTE-X 73790 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr7-3780 chr7 84112948 84113158 + 5.89 0.000 intron (NM_006080, intron 3 of 16) intron (NM_006080, intron 3 of 16) 81736 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr10-2039 chr10 79779377 79779587 + 5.89 0.000 intron (NR_120611, intron 5 of 5) intron (NR_120611, intron 5 of 5) -46420 NR_029407 642361 Hs.164298 NR_029407 ENSG00000272447 LOC642361 - uncharacterized LOC642361 ncRNA chr9-7137 chr9 132199628 132199838 + 5.89 0.000 intron (NM_032536, intron 3 of 7) MER77|LTR|ERVL 37675 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chrX-3486 chrX 38019267 38019477 + 5.89 0.000 intron (NM_138780, intron 1 of 16) intron (NM_138780, intron 1 of 16) 4614 NR_039674 100616252 NR_039674 ENSG00000221466 MIR548AJ2 - microRNA 548aj-2 ncRNA chr12-3832 chr12 84533790 84534000 + 5.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR 378904 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr2-8443 chr2 120617175 120617385 + 5.89 0.000 Intergenic Intergenic -118588 NM_001371271 chr2-11684 chr2 8574697 8574907 + 5.89 0.000 intron (NR_110257, intron 4 of 5) intron (NR_110257, intron 4 of 5) 8990 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr19-4013 chr19 3415001 3415211 + 5.89 0.000 intron (NM_001245002, intron 2 of 10) AluSx1|SINE|Alu 48523 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr19-6921 chr19 46125505 46125715 + 5.89 0.000 promoter-TSS (NM_207393) promoter-TSS (NM_207393) -922 NM_207393 388555 Hs.365496 NM_207393 ENSG00000188624 IGFL3 UNQ483 IGF like family member 3 protein-coding chr13-2494 chr13 52118157 52118367 + 5.89 0.000 intron (NM_199289, intron 4 of 21) intron (NM_199289, intron 4 of 21) -10633 NR_110306 101929657 Hs.637461 NR_110306 ENSG00000273523 LOC101929657 - uncharacterized LOC101929657 ncRNA chr8-3308 chr8 28230013 28230223 + 5.89 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -87150 NM_006228 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chrX-4074 chrX 21495260 21495470 + 5.89 0.000 intron (NM_001168648, intron 6 of 20) MIR|SINE|MIR 120947 NM_001330771 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr20-3224 chr20 60995908 60996118 + 5.89 0.000 Intergenic Intergenic -83051 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LINC01718 - long intergenic non-protein coding RNA 1718 ncRNA chr13-2902 chr13 113247674 113247884 + 5.89 0.000 intron (NM_001008895, intron 15 of 19) intron (NM_001008895, intron 15 of 19) -15141 NR_107042 102465874 NR_107042 ENSG00000277942 MIR8075 hsa-mir-8075 microRNA 8075 ncRNA chr11-6859 chr11 100177122 100177332 + 5.89 0.000 intron (NM_001243270, intron 12 of 23) L2c|LINE|L2 -510061 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr1-10504 chr1 166165008 166165218 + 5.89 0.000 intron (NR_163271, intron 1 of 2) CpG 1642 NM_001017961 149297 Hs.22930 NM_001017961 ENSG00000188859 FAM78B - family with sequence similarity 78 member B protein-coding chr6-4862 chr6 87845846 87846056 + 5.89 0.000 intron (NR_110869, intron 2 of 4) 7SLRNA|srpRNA|srpRNA 61091 NR_110869 101928911 Hs.571178 NR_110869 LOC101928911 - uncharacterized LOC101928911 ncRNA chr21-1802 chr21 38965136 38965346 + 5.89 0.000 Intergenic MER4B|LTR|ERV1 12533 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr17-7427 chr17 10756087 10756297 + 5.89 0.000 intron (NR_073457, intron 2 of 3) intron (NR_073457, intron 2 of 3) -25863 NM_001330139 388335 Hs.462230 NM_001004313 ENSG00000187824 TMEM220 - transmembrane protein 220 protein-coding chr11-3792 chr11 64400947 64401157 + 5.89 0.000 Intergenic ERVL-E-int|LTR|ERVL 32450 NR_031602 100302280 NR_031602 ENSG00000221273 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA chr12-6329 chr12 54968720 54968930 + 5.89 0.000 intron (NR_147072, intron 1 of 9) intron (NR_147072, intron 1 of 9) 4907 NM_001351153 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|ITPRID3|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr1-10474 chr1 162652096 162652306 + 5.89 0.000 intron (NM_006182, intron 1 of 17) intron (NM_006182, intron 1 of 17) 19737 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr5-5333 chr5 129906522 129906732 + 5.89 0.000 intron (NM_175856, intron 1 of 2) intron (NM_175856, intron 1 of 2) 2162 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chrX-3918 chrX 9394742 9394952 + 5.89 0.000 Intergenic Intergenic -68448 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr4-8092 chr4 124438216 124438426 + 5.89 0.000 Intergenic L2a|LINE|L2 120113 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr1-14935 chr1 86050463 86050673 + 5.89 0.000 intron (NM_152890, intron 10 of 59) intron (NM_152890, intron 10 of 59) 105903 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr3-9252 chr3 39101128 39101338 + 5.89 0.000 intron (NM_001278790, intron 1 of 5) intron (NM_001278790, intron 1 of 5) 6394 NR_103866 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding chr13-3664 chr13 33228291 33228501 + 5.89 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -22346 NM_001243474 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr15-3328 chr15 80211933 80212143 + 5.89 0.000 intron (NM_001352888, intron 1 of 2) LTR16A2|LTR|ERVL 40175 NM_001352888 100996492 Hs.20034 NM_001352888 ENSG00000259417 CTXND1 LINC01314 cortexin domain containing 1 protein-coding chr5-6663 chr5 56432894 56433104 + 5.89 0.000 Intergenic Intergenic 48770 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr1-11107 chr1 230106400 230106610 + 5.89 0.000 intron (NM_004481, intron 1 of 15) intron (NM_004481, intron 1 of 15) 39267 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr12-4367 chr12 4022502 4022712 + 5.89 0.000 Intergenic HERVH-int|LTR|ERV1 -149159 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr10-3841 chr10 4060365 4060575 + 5.89 0.000 intron (NR_120632, intron 1 of 3) intron (NR_120632, intron 1 of 3) 8744 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA chr5-8032 chr5 90295259 90295469 + 5.89 0.000 Intergenic Intergenic -5293 NR_120601 101929495 Hs.346679 NR_120601 LINC01339 - long intergenic non-protein coding RNA 1339 ncRNA chr3-8853 chr3 9593406 9593616 + 5.89 0.000 Intergenic LTR48B|LTR|ERV1 -39689 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr5-8188 chr5 105433340 105433550 + 5.89 0.000 Intergenic L1MB5|LINE|L1 333971 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr2-10347 chr2 162623703 162623913 + 5.89 0.000 intron (NM_033272, intron 2 of 15) intron (NM_033272, intron 2 of 15) -145128 NR_110258 101929570 Hs.470445 NR_110258 ENSG00000237750 LOC101929570 - uncharacterized LOC101929570 ncRNA chr8-7030 chr8 111642997 111643207 + 5.89 0.000 Intergenic LTR12C|LTR|ERV1 266463 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr1-16350 chr1 219271395 219271605 + 5.89 0.000 Intergenic Intergenic 96531 NM_001300772 127018 Hs.657617 NM_138794 ENSG00000143353 LYPLAL1 Q96AV0 lysophospholipase like 1 protein-coding chr19-6601 chr19 28570804 28571014 + 5.89 0.000 intron (NR_110759, intron 5 of 9) intron (NR_110759, intron 5 of 9) -35779 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA KI270730.1-8 KI270730.1 107012 107222 + 5.89 0.000 NA NA NA NA chr22-2333 chr22 41401922 41402132 + 5.89 0.000 Intergenic Intergenic 20085 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr12-2365 chr12 13338833 13339043 + 5.89 0.000 Intergenic AluY|SINE|Alu 37807 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr10-8518 chr10 91493369 91493579 + 5.89 0.000 exon (NM_001348365, exon 14 of 21) exon (NM_001348365, exon 14 of 21) 83189 NR_104291 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr9-6614 chr9 129398604 129398814 + 5.89 0.000 Intergenic Intergenic 61786 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr20-3799 chr20 22893456 22893666 + 5.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR -141859 NM_001052 6754 Hs.673846 NM_001052 ENSG00000132671 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding chrX-4913 chrX 109019204 109019414 + 5.89 0.000 Intergenic Intergenic 282769 NR_110652 101928358 Hs.722300 NR_110652 ENSG00000237863 LOC101928358 - uncharacterized LOC101928358 ncRNA chr14-2683 chr14 76667690 76667900 + 5.89 0.000 Intergenic Intergenic -93673 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr9-4284 chr9 112664834 112665044 + 5.89 0.000 3' UTR (NM_001287036, exon 5 of 5) 3' UTR (NM_001287036, exon 5 of 5) 53178 NR_138054 58493 Hs.658575 NM_021218 ENSG00000148153 INIP C9orf80|HSPC043|MISE|SOSSC|SSBIP1|hSSBIP1 INTS3 and NABP interacting protein protein-coding chr2-11731 chr2 10599773 10599983 + 5.89 0.000 intron (NR_048552, intron 16 of 19) MIR3|SINE|MIR 90097 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr2-14183 chr2 206591622 206591832 + 5.89 0.000 intron (NM_003812, intron 21 of 25) L1ME3B|LINE|L1 -52500 NM_001102659 200726 NM_001102659 ENSG00000235118 FAM237A - family with sequence similarity 237 member A protein-coding chr7-9597 chr7 148634087 148634297 + 5.89 0.000 Intergenic Intergenic 43426 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr2-7890 chr2 54633426 54633636 + 5.89 0.000 intron (NM_178313, intron 16 of 30) intron (NM_178313, intron 16 of 30) 75137 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr14-4602 chr14 51707844 51708054 + 5.89 0.000 intron (NM_001042481, intron 7 of 14) intron (NM_001042481, intron 7 of 14) -9334 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr17-7999 chr17 49505627 49505837 + 5.89 0.000 TTS (NR_103773) TTS (NR_103773) -5085 NR_106751 102465141 NR_106751 ENSG00000277478 MIR6165 hsa-mir-6165 microRNA 6165 ncRNA chr11-6425 chr11 65946670 65946880 + 5.89 0.000 intron (NM_152762, intron 1 of 7) intron (NM_152762, intron 1 of 7) 1131 NM_152762 254187 Hs.350671 NM_152762 ENSG00000175513 TSGA10IP FAM161C testis specific 10 interacting protein protein-coding chr19-5377 chr19 8883884 8884094 + 5.89 0.000 intron (NM_024690, intron 63 of 83) intron (NM_024690, intron 63 of 83) 41396 NM_145208 85509 Hs.133912 NM_145208 ENSG00000170948 MBD3L1 MBD3L methyl-CpG binding domain protein 3 like 1 protein-coding chr16-5968 chr16 4815033 4815243 + 5.89 0.000 intron (NM_001324098, intron 9 of 14) AluJb|SINE|Alu -12188 NR_046480 79641 Hs.459795 NM_024589 ENSG00000067836 ROGDI KTZS rogdi atypical leucine zipper protein-coding chr2-12968 chr2 104386803 104387013 + 5.89 0.000 intron (NR_037885, intron 2 of 2) L2c|LINE|L2 21424 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA chr5-6096 chr5 15649649 15649859 + 5.89 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -34752 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr22-4292 chr22 49944456 49944666 + 5.89 0.000 Intergenic Intergenic -16211 NM_001001852 415116 Hs.530381 NM_001001852 ENSG00000198355 PIM3 pim-3 Pim-3 proto-oncogene, serine/threonine kinase protein-coding chr5-4563 chr5 21885468 21885678 + 5.89 0.000 intron (NM_004061, intron 6 of 14) intron (NM_004061, intron 6 of 14) 1119 NR_132787 106635539 NR_132787 SNORA105A - small nucleolar RNA, H/ACA box 105A snoRNA chr6-2086 chr6 150599875 150600085 + 5.89 0.000 promoter-TSS (NM_001329799) promoter-TSS (NM_001329799) 95 NM_001329804 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr1-9838 chr1 62893574 62893784 + 5.89 0.000 Intergenic Intergenic 109547 NM_032852 84938 Hs.7353 NM_032852 ENSG00000125703 ATG4C APG4-C|APG4C|AUTL1|AUTL3 autophagy related 4C cysteine peptidase protein-coding chr9-6445 chr9 83087313 83087523 + 5.89 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -24276 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr17-6809 chr17 8258831 8259041 + 5.89 0.000 intron (NM_012393, intron 11 of 27) AluY|SINE|Alu 9647 NM_012393 5198 Hs.573976 NM_012393 ENSG00000178921 PFAS FGAMS|FGAR-AT|FGARAT|GATD8|PURL phosphoribosylformylglycinamidine synthase protein-coding chr8-7410 chr8 140015763 140015973 + 5.89 0.000 intron (NM_001160372, intron 18 of 22) intron (NM_001160372, intron 18 of 22) 84667 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr6-6673 chr6 164083222 164083432 + 5.89 0.000 Intergenic LTR78B|LTR|ERV1 -411843 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chrX-4102 chrX 24229559 24229769 + 5.89 0.000 Intergenic AluJb|SINE|Alu 79935 NM_001178084 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chr19-6663 chr19 33912910 33913120 + 5.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR 116145 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr8-7038 chr8 112580489 112580699 + 5.89 0.000 intron (NM_001363185, intron 21 of 66) intron (NM_001363185, intron 21 of 66) -62899 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr5-8924 chr5 157721586 157721796 + 5.89 0.000 Intergenic L1PA6|LINE|L1 -9729 NM_001317824 54974 Hs.353090 NM_017872 ENSG00000113272 THG1L ICF45|IHG-1|hTHG1 tRNA-histidine guanylyltransferase 1 like protein-coding chr7-5853 chr7 89282723 89282933 + 5.89 0.000 intron (NM_181646, intron 2 of 3) MLT1D|LTR|ERVL-MaLR -487091 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr16-2739 chr16 616062 616272 + 5.89 0.000 intron (NM_021168, intron 1 of 5) AluYh3|SINE|Alu -14818 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr2-13825 chr2 175796939 175797149 + 5.89 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 205223 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr4-8049 chr4 120914617 120914827 + 5.89 0.000 intron (NM_001300824, intron 1 of 13) L1PB3|LINE|L1 8144 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr18-1258 chr18 56148550 56148760 + 5.89 0.000 intron (NR_148972, intron 3 of 8) MLT1H2|LTR|ERVL-MaLR -11119 NR_040025 100505474 Hs.662191 NR_040025 ENSG00000267712 LINC01539 - long intergenic non-protein coding RNA 1539 ncRNA chr10-5733 chr10 101635344 101635554 + 5.89 0.000 intron (NR_136613, intron 4 of 7) MER1A|DNA|hAT-Charlie -33952 NR_036115 100423033 NR_036115 ENSG00000283558 MIR3158-2 mir-3158-2 microRNA 3158-2 ncRNA chr6-8595 chr6 166758582 166758792 + 5.89 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 103838 NM_001318937 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr11-7022 chr11 118084087 118084297 + 5.89 0.000 intron (NM_001173552, intron 1 of 11) MIRb|SINE|MIR 2771 NM_001354434 100526771 Hs.627426 NM_001354434 SMIM35 TMPRSS4-AS1 small integral membrane protein 35 protein-coding chr20-3088 chr20 21156266 21156476 + 5.89 0.000 intron (NM_018474, intron 4 of 12) intron (NM_018474, intron 4 of 12) 30289 NM_001163022 55857 Hs.187635 NM_018474 ENSG00000088970 KIZ C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69 kizuna centrosomal protein protein-coding chr17-7551 chr17 18948457 18948667 + 5.89 0.000 Intergenic Intergenic -2114 NM_001282417 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr2-14554 chr2 230874555 230874765 + 5.89 0.000 intron (NM_001287241, intron 3 of 6) intron (NM_001287241, intron 3 of 6) 9710 NM_001012516 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr16-6094 chr16 12276985 12277195 + 5.89 0.000 intron (NM_032167, intron 14 of 20) intron (NM_032167, intron 14 of 20) 300356 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr16-4392 chr16 49980263 49980473 + 5.89 0.000 Intergenic Intergenic -44838 NR_104042 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding chr4-7048 chr4 28575989 28576199 + 5.89 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -243488 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr3-10937 chr3 174482562 174482772 + 5.89 0.000 Intergenic Intergenic -376667 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr3-9801 chr3 73056267 73056477 + 5.89 0.000 intron (NM_001318026, intron 3 of 8) intron (NM_001318026, intron 3 of 8) -5287 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr2-10040 chr2 29889657 29889867 + 5.89 0.000 intron (NM_004304, intron 1 of 28) intron (NM_004304, intron 1 of 28) 31824 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr16-6189 chr16 26593023 26593233 + 5.89 0.000 Intergenic L1ME3D|LINE|L1 -473799 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr12-5389 chr12 120814924 120815134 + 5.89 0.000 intron (NM_139015, intron 1 of 10) L1ME4b|LINE|L1 89203 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr12-8091 chr12 117925654 117925864 + 5.89 0.000 intron (NM_173598, intron 1 of 19) MIRb|SINE|MIR 43231 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr8-5555 chr8 73283089 73283299 + 5.89 0.000 Intergenic Intergenic 10439 NM_000971 6129 Hs.421257 NM_000971 ENSG00000147604 RPL7 L7|humL7-1 ribosomal protein L7 protein-coding chr1-15014 chr1 92736438 92736648 + 5.89 0.000 exon (NM_005665, exon 2 of 18) exon (NM_005665, exon 2 of 18) 48565 NM_001350197 7813 Hs.594434 NM_005665 ENSG00000067208 EVI5 EVI-5|NB4S ecotropic viral integration site 5 protein-coding chr2-7898 chr2 55255797 55256007 + 5.89 0.000 intron (NM_001005369, intron 6 of 16) AluSq|SINE|Alu 13277 NM_001005369 4528 Hs.149894 NM_002453 ENSG00000085760 MTIF2 - mitochondrial translational initiation factor 2 protein-coding chr2-6030 chr2 109103778 109103988 + 5.89 0.000 Intergenic AluY|SINE|Alu -25322 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr2-10283 chr2 129243279 129243489 + 5.89 0.000 non-coding (NR_122040, exon 5 of 5) non-coding (NR_122040, exon 5 of 5) 30507 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr18-2238 chr18 69527184 69527394 + 5.89 0.000 intron (NM_152721, intron 1 of 7) THE1C|LTR|ERVL-MaLR 57358 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr18-3189 chr18 45295314 45295524 + 5.89 0.000 intron (NM_001371319, intron 4 of 23) intron (NM_001371319, intron 4 of 23) 82424 NM_001242692 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr3-8194 chr3 41598756 41598966 + 5.89 0.000 intron (NR_136342, intron 29 of 34) MLT1D|LTR|ERVL-MaLR 363242 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr8-1668 chr8 30562273 30562483 + 5.89 0.000 intron (NM_006867, intron 8 of 9) intron (NM_006867, intron 8 of 9) -76202 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr22-4102 chr22 43446497 43446707 + 5.89 0.000 intron (NM_001362786, intron 3 of 6) intron (NM_001362786, intron 3 of 6) 30050 NM_001362786 758 Hs.159538 NM_001044370 ENSG00000186732 MPPED1 239AB|C22orf1|FAM1A metallophosphoesterase domain containing 1 protein-coding chrX-3280 chrX 101250063 101250273 + 5.89 0.000 intron (NM_001939, intron 14 of 23) (CT)n|Simple_repeat|Simple_repeat 30224 NM_001171184 1821 Hs.159291 NM_001939 ENSG00000102385 DRP2 DRP-2 dystrophin related protein 2 protein-coding chr18-2542 chr18 147713 147923 + 5.89 0.000 Intergenic AluJb|SINE|Alu -10739 NM_001037334 9097 Hs.464416 NM_005151 ENSG00000101557 USP14 TGT ubiquitin specific peptidase 14 protein-coding chr5-7848 chr5 71925426 71925636 + 5.89 0.000 Intergenic Intergenic -181944 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chrX-4095 chrX 23714925 23715135 + 5.89 0.000 intron (NM_001037171, intron 8 of 15) intron (NM_001037171, intron 8 of 15) 28246 NM_001330259 23597 Hs.298885 NM_001033583 ENSG00000123130 ACOT9 ACATE2|CGI-16|MT-ACT48|MTACT48 acyl-CoA thioesterase 9 protein-coding chr5-6381 chr5 139933182 139933392 + 5.89 0.000 intron (NM_013983, intron 1 of 10) AluSz|SINE|Alu 110012 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr14-5125 chr14 89805519 89805729 + 5.89 0.000 intron (NM_001284269, intron 5 of 5) intron (NM_001284269, intron 5 of 5) 148912 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr5-6584 chr5 26432986 26433196 + 5.89 0.000 Intergenic L1M1|LINE|L1 605495 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr2-13184 chr2 120794755 120794965 + 5.89 0.000 intron (NM_005270, intron 1 of 13) intron (NM_005270, intron 1 of 13) 2579 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr1-16189 chr1 207175248 207175458 + 5.89 0.000 Intergenic Intergenic 71120 NM_000715 722 Hs.1012 NM_000715 ENSG00000123838 C4BPA C4BP|PRP complement component 4 binding protein alpha protein-coding chr12-7745 chr12 93913171 93913381 + 5.89 0.000 intron (NR_135017, intron 1 of 2) L1MB3|LINE|L1 30330 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr5-8475 chr5 132237594 132237804 + 5.89 0.000 Intergenic ORSL-2a|DNA|hAT-Tip100 -9846 NM_001365677 8974 Hs.519568 NM_004199 ENSG00000072682 P4HA2 MYP25 prolyl 4-hydroxylase subunit alpha 2 protein-coding chr1-9211 chr1 22362650 22362860 + 5.89 0.000 Intergenic MIRb|SINE|MIR -89096 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr15-4100 chr15 75856265 75856475 + 5.89 0.000 intron (NM_001284382, intron 2 of 11) L1M5|LINE|L1 12326 NM_001145335 92912 Hs.23033 NM_173469 ENSG00000140367 UBE2Q2 - ubiquitin conjugating enzyme E2 Q2 protein-coding chr22-3390 chr22 32992072 32992282 + 5.89 0.000 intron (NM_003490, intron 2 of 13) intron (NM_003490, intron 2 of 13) 14644 NM_133633 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr1-12052 chr1 116151263 116151473 + 5.89 0.000 Intergenic Intergenic 39613 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr13-4486 chr13 113592309 113592519 + 5.89 0.000 intron (NM_007111, intron 2 of 11) AluSp|SINE|Alu 7661 NM_007111 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chrX-4467 chrX 57814326 57814536 + 5.89 0.000 Intergenic L1P2|LINE|L1 96202 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr15-2994 chr15 54068972 54069182 + 5.89 0.000 intron (NM_001329919, intron 2 of 31) intron (NM_001329919, intron 2 of 31) 56429 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr2-9972 chr2 10182992 10183202 + 5.89 0.000 intron (NR_161344, intron 3 of 3) AluJo|SINE|Alu 9574 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr9-8060 chr9 97619008 97619218 + 5.89 0.000 intron (NM_139246, intron 3 of 9) MIRc|SINE|MIR 14255 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr2-11858 chr2 21646476 21646686 + 5.89 0.000 Intergenic Intergenic 64071 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr8-3810 chr8 28476069 28476279 + 5.89 0.000 intron (NM_172366, intron 2 of 8) intron (NM_172366, intron 2 of 8) 14055 NM_172366 157574 Hs.741522 NM_172366 ENSG00000214050 FBXO16 FBX16 F-box protein 16 protein-coding chr7-7572 chr7 122674062 122674272 + 5.89 0.000 intron (NM_001167940, intron 2 of 29) LTR12C|LTR|ERV1 24950 NM_139175 168433 Hs.126730 NM_139175 ENSG00000188050 RNF133 - ring finger protein 133 protein-coding chr13-843 chr13 86005753 86005963 + 5.89 0.000 Intergenic AluY|SINE|Alu -206439 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr2-3692 chr2 205657647 205657857 + 5.89 0.000 Intergenic Intergenic -24748 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chrX-4209 chrX 36898602 36898812 + 5.89 0.000 Intergenic L1M4a2|LINE|L1 -109652 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr11-8873 chr11 14057119 14057329 + 5.89 0.000 intron (NM_006108, intron 3 of 15) L1MC4|LINE|L1 94501 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr13-3597 chr13 28658348 28658558 + 5.89 0.000 promoter-TSS (NM_015932) promoter-TSS (NM_015932) -677 NM_015932 51371 Hs.268742 NM_015932 ENSG00000132963 POMP C13orf12|HSPC014|PNAS-110|PRAAS2|UMP1 proteasome maturation protein protein-coding chr5-5968 chr5 118605498 118605708 + 5.89 0.000 intron (NR_104998, intron 1 of 4) (T)n|Simple_repeat|Simple_repeat 9415 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chrX-3888 chrX 6442651 6442861 + 5.89 0.000 Intergenic LTR1D1|LTR|ERV1 -58793 NR_039927 100616373 NR_039927 ENSG00000265284 MIR4770 - microRNA 4770 ncRNA chr14-5300 chr14 101132079 101132289 + 5.89 0.000 Intergenic Intergenic 11328 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr5-7248 chr5 11002443 11002653 + 5.89 0.000 intron (NM_001288715, intron 17 of 20) intron (NM_001288715, intron 17 of 20) -241314 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr8-3765 chr8 23826207 23826417 + 5.89 0.000 Intergenic Intergenic 28494 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr8-4895 chr8 78617625 78617835 + 5.89 0.000 Intergenic L1MC3|LINE|L1 -48359 NM_016010 51101 Hs.271876 NM_016010 ENSG00000104427 ZC2HC1A C8orf70|CGI-62|FAM164A zinc finger C2HC-type containing 1A protein-coding chr14-5015 chr14 78050375 78050585 + 5.89 0.000 Intergenic Intergenic -119893 NR_073547 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr1-16198 chr1 207617678 207617888 + 5.89 0.000 intron (NM_000573, intron 33 of 38) intron (NM_000573, intron 33 of 38) -27350 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr22-3776 chr22 28793115 28793325 + 5.89 0.000 Intergenic AluSq2|SINE|Alu 7352 NM_001079539 7494 Hs.437638 NM_005080 ENSG00000100219 XBP1 TREB-5|TREB5|XBP-1|XBP2 X-box binding protein 1 protein-coding chr17-6865 chr17 27674581 27674791 + 5.89 0.000 Intergenic Intergenic 43498 NM_002308 3965 Hs.81337 NM_002308 ENSG00000168961 LGALS9 HUAT|LGALS9A galectin 9 protein-coding chr6-6637 chr6 155063165 155063375 + 5.89 0.000 Intergenic Intergenic -27019 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr10-2968 chr10 70991613 70991823 + 5.89 0.000 Intergenic Intergenic 52665 NR_134314 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr21-1383 chr21 43298601 43298811 + 5.89 0.000 Intergenic CpG 33333 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr7-8475 chr7 49257508 49257718 + 5.89 0.000 Intergenic Intergenic 333066 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding chr6-3693 chr6 162553409 162553619 + 5.89 0.000 intron (NM_004562, intron 1 of 11) intron (NM_004562, intron 1 of 11) -173618 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr10-6100 chr10 132347939 132348149 + 5.89 0.000 exon (NM_001143759, exon 6 of 9) exon (NM_001143759, exon 6 of 9) 10704 NM_001309474 80313 Hs.119897 NM_030626 ENSG00000148814 LRRC27 - leucine rich repeat containing 27 protein-coding chr13-3423 chr13 99438567 99438777 + 5.89 0.000 Intergenic L1M2|LINE|L1 60634 NR_110731 102725509 Hs.648968 NR_110731 LINC01232 TCONS_00021520 long intergenic non-protein coding RNA 1232 ncRNA chr4-5269 chr4 173674070 173674280 + 5.89 0.000 Intergenic Intergenic 143717 NR_003679 79804 Hs.61435 NR_003679 ENSG00000237125 HAND2-AS1 DEIN|NBLA00301|UPH HAND2 antisense RNA 1 ncRNA chr3-9000 chr3 18204325 18204535 + 5.89 0.000 intron (NR_161333, intron 4 of 4) LTR16E2|LTR|ERVL 220909 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr15-5004 chr15 80920810 80921020 + 5.89 0.000 intron (NM_001293304, intron 15 of 29) intron (NM_001293304, intron 15 of 29) 68904 NR_126327 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr7-9183 chr7 115618662 115618872 + 5.89 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -37326 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr11-10554 chr11 120988467 120988677 + 5.89 0.000 3' UTR (NM_014619, exon 21 of 21) 3' UTR (NM_014619, exon 21 of 21) -30533 NR_133004 101929208 Hs.662310 NR_133004 LOC101929208 - uncharacterized LOC101929208 ncRNA chr5-9174 chr5 177841385 177841595 + 5.89 0.000 Intergenic L1MC3|LINE|L1 -31983 NR_157842 105377752 NR_157842 LOC105377752 - FAM83G pseudogene pseudo chr6-8097 chr6 126015823 126016033 + 5.89 0.000 intron (NM_001031712, intron 11 of 12) L1MC4|LINE|L1 29388 NR_146804 60487 Hs.404186 NM_021820 ENSG00000066651 TRMT11 C6orf75|MDS024|TRM11|TRMT11-1 tRNA methyltransferase 11 homolog protein-coding chr8-3823 chr8 29224908 29225118 + 5.89 0.000 intron (NM_015254, intron 2 of 39) intron (NM_015254, intron 2 of 39) 38057 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr10-6490 chr10 49624292 49624502 + 5.89 0.000 intron (NM_001142929, intron 5 of 14) intron (NM_001142929, intron 5 of 14) 10360 NM_001142929 1103 Hs.302002 NM_020549 ENSG00000070748 CHAT CHOACTASE|CMS1A|CMS1A2|CMS6 choline O-acetyltransferase protein-coding chr12-8102 chr12 119187044 119187254 + 5.89 0.000 intron (NM_014365, intron 2 of 2) intron (NM_014365, intron 2 of 2) 8359 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr2-11794 chr2 16314707 16314917 + 5.89 0.000 Intergenic L2b|LINE|L2 264385 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA chr2-12080 chr2 32909345 32909555 + 5.89 0.000 intron (NR_027099, intron 10 of 10) intron (NR_027099, intron 10 of 10) -17677 NR_027097 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr13-3959 chr13 61526022 61526232 + 5.89 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -98181 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LINC02339 - long intergenic non-protein coding RNA 2339 ncRNA chr2-12438 chr2 58022570 58022780 + 5.89 0.000 intron (NM_001288838, intron 1 of 15) AluSz6|SINE|Alu -23967 NM_001288836 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr13-2678 chr13 86332311 86332521 + 5.89 0.000 Intergenic AluSq|SINE|Alu -532997 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr1-13389 chr1 1728371 1728581 + 5.89 0.000 3' UTR (NM_182838, exon 6 of 6) 3' UTR (NM_182838, exon 6 of 6) -4119 NR_132740 728642 Hs.651228 NM_024011 ENSG00000008128 CDK11A CDC2L2|CDC2L3|CDK11-p110|CDK11-p46|CDK11-p58|PITSLRE|p58GTA cyclin dependent kinase 11A protein-coding chr2-8759 chr2 162530875 162531085 + 5.89 0.000 intron (NM_033272, intron 3 of 15) intron (NM_033272, intron 3 of 15) 186612 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr2-12976 chr2 105032470 105032680 + 5.89 0.000 intron (NR_110603, intron 1 of 2) intron (NR_110603, intron 1 of 2) -5494 NM_182640 64965 Hs.590900 NM_182640 ENSG00000135972 MRPS9 MRP-S9|RPMS9|S9mt mitochondrial ribosomal protein S9 protein-coding chr20-3215 chr20 56488338 56488548 + 5.89 0.000 intron (NM_001283036, intron 5 of 8) intron (NM_001283036, intron 5 of 8) 19858 NM_001283035 51507 Hs.517134 NM_016407 ENSG00000022277 RTF2 C20orf43|CDAO5|HSPC164|RTFDC1|SHUJUN-3 replication termination factor 2 protein-coding chr22-4296 chr22 50019479 50019689 + 5.89 0.000 intron (NM_001350317, intron 13 of 13) MLT1F|LTR|ERVL-MaLR -6819 NM_001371417 GL339449.2-1 GL339449.2 177160 177370 + 5.89 0.000 NA NA NA NA chr4-7729 chr4 90151980 90152190 + 5.89 0.000 intron (NM_001145065, intron 1 of 10) MLT1K|LTR|ERVL-MaLR 24552 NM_001145065 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr12-8250 chr12 124604693 124604903 + 5.89 0.000 Intergenic MIR|SINE|MIR -37186 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr6-8302 chr6 143879973 143880183 + 5.89 0.000 intron (NM_001013623, intron 1 of 7) AluJo|SINE|Alu 15604 NM_001013623 153918 Hs.121188 NM_001013623 ENSG00000118491 ZC2HC1B C6orf94|FAM164B|dJ468K18.5 zinc finger C2HC-type containing 1B protein-coding chr2-14172 chr2 205461615 205461825 + 5.89 0.000 intron (NM_057177, intron 19 of 21) MER5A|DNA|hAT-Charlie -220780 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr14-3116 chr14 66233202 66233412 + 5.89 0.000 Intergenic Intergenic -253064 NR_110307 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr9-6231 chr9 121608078 121608288 + 5.89 0.000 intron (NM_032552, intron 1 of 16) MIRc|SINE|MIR 41081 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr19-4602 chr19 12865817 12866027 + 5.89 0.000 intron (NM_014975, intron 16 of 25) G-rich|Low_complexity|Low_complexity 13662 NR_106852 102466196 NR_106852 ENSG00000276181 MIR6794 hsa-mir-6794 microRNA 6794 ncRNA chr12-7948 chr12 109428099 109428309 + 5.89 0.000 intron (NM_001101421, intron 18 of 30) intron (NM_001101421, intron 18 of 30) 39485 NM_001101421 283446 Hs.512008 NM_173597 ENSG00000174527 MYO1H - myosin IH protein-coding chr3-9450 chr3 49362092 49362302 + 5.89 0.000 intron (NM_001313943, intron 4 of 5) AluSx1|SINE|Alu -3597 NM_001329455 2876 Hs.76686 NM_000581 ENSG00000233276 GPX1 GPXD|GSHPX1 glutathione peroxidase 1 protein-coding chr6-4754 chr6 70968997 70969207 + 5.89 0.000 Intergenic Intergenic -12042 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr11-6695 chr11 77668874 77669084 + 5.89 0.000 intron (NM_016578, intron 15 of 15) L2a|LINE|L2 -31173 NM_001311199 1207 Hs.430733 NM_001293 ENSG00000074201 CLNS1A CLCI|CLNS1B|ICln chloride nucleotide-sensitive channel 1A protein-coding chr7-2703 chr7 26148420 26148630 + 5.89 0.000 Intergenic SVA_D|Retroposon|SVA -3673 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr2-9673 chr2 31614045 31614255 + 5.89 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -33212 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr12-7945 chr12 109343706 109343916 + 5.89 0.000 Intergenic Intergenic 15677 NR_120462 101928138 Hs.143843 NR_120462 ENSG00000256560 LINC01486 - long intergenic non-protein coding RNA 1486 ncRNA chr11-10540 chr11 120385061 120385271 + 5.89 0.000 promoter-TSS (NM_001301084) promoter-TSS (NM_001301084) -161 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr7-7458 chr7 89802673 89802883 + 5.89 0.000 Intergenic L1PBa|LINE|L1 -316622 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr11-4524 chr11 117984747 117984957 + 5.89 0.000 Intergenic LTR38C|LTR|ERV1 -1539 NM_001558 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding chr4-5313 chr4 180915480 180915690 + 5.89 0.000 Intergenic L2c|LINE|L2 243564 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr14-3286 chr14 83505039 83505249 + 5.89 0.000 Intergenic MER41A|LTR|ERV1 862512 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chrX-2578 chrX 103933364 103933574 + 5.89 0.000 intron (NM_001350213, intron 1 of 3) L1ME3B|LINE|L1 -13921 NR_146556 100128594 Hs.525914 NR_146556 ENSG00000231728 TMSB15B-AS1 - TMSB15B antisense RNA 1 ncRNA chr4-8472 chr4 157494135 157494345 + 5.89 0.000 Intergenic Intergenic -78250 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr12-7024 chr12 33662699 33662909 + 5.89 0.000 Intergenic MLT2E|LTR|ERVL -222985 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding chr17-7854 chr17 42166120 42166330 + 5.89 0.000 intron (NM_012285, intron 10 of 16) intron (NM_012285, intron 10 of 16) -11236 NM_004583 5878 Hs.650382 NM_004583 ENSG00000108774 RAB5C L1880|RAB5CL|RAB5L|RABL RAB5C, member RAS oncogene family protein-coding chr5-7908 chr5 76548070 76548280 + 5.89 0.000 intron (NM_001285460, intron 1 of 34) MIRc|SINE|MIR 766 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr16-6022 chr16 9007419 9007629 + 5.89 0.000 Intergenic Intergenic -43618 NM_003470 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chrX-1935 chrX 2900766 2900976 + 5.89 0.000 Intergenic AluJr|SINE|Alu -4033 NR_144459 100506356 Hs.528631 NR_144459 ENSG00000229851 ARSD-AS1 - ARSD antisense RNA 1 ncRNA chr5-6813 chr5 102555625 102555835 + 5.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR -25638 NR_047462 100861468 Hs.519483 NR_047462 ENSG00000250958 LINC00492 - long intergenic non-protein coding RNA 492 ncRNA chr11-6015 chr11 24525768 24525978 + 5.89 0.000 intron (NM_001252008, intron 1 of 11) intron (NM_001252008, intron 1 of 11) 28820 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr2-9416 chr2 232116012 232116222 + 5.89 0.000 intron (NR_046477, intron 6 of 18) AluSz6|SINE|Alu -56536 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr5-7745 chr5 60417851 60418061 + 5.89 0.000 intron (NM_001364599, intron 1 of 16) intron (NM_001364599, intron 1 of 16) -45293 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chrX-4265 chrX 40780497 40780707 + 5.89 0.000 Intergenic L1M1|LINE|L1 -45060 NM_004229 9282 Hs.407604 NM_004229 ENSG00000180182 MED14 CRSP150|CRSP2|CSRP|CXorf4|DRIP150|EXLM1|RGR1|TRAP170 mediator complex subunit 14 protein-coding chr5-3551 chr5 40532091 40532301 + 5.89 0.000 Intergenic THE1B|LTR|ERVL-MaLR -147719 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr2-14278 chr2 215851122 215851332 + 5.89 0.000 Intergenic Intergenic -7691 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr3-7552 chr3 193795816 193796026 + 5.89 0.000 Intergenic AluSx1|SINE|Alu 48088 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr21-899 chr21 17449341 17449551 + 5.89 0.000 TTS (NR_037585) TTS (NR_037585) 10556 NR_037586 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chrX-3460 chrX 26748542 26748752 + 5.89 0.000 Intergenic Intergenic 190310 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr2-13395 chr2 139384281 139384491 + 5.89 0.000 Intergenic ERVL-E-int|LTR|ERVL 487062 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr3-10889 chr3 170493634 170493844 + 5.89 0.000 intron (NM_020949, intron 4 of 7) intron (NM_020949, intron 4 of 7) 26454 NR_135555 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr19-5526 chr19 49226229 49226439 + 5.89 0.000 Intergenic HERVL40-int|LTR|ERVL 68542 NM_001195227 54795 Hs.467101 NM_017636 ENSG00000130529 TRPM4 LTrpC4|PFHB1B|TRPM4B|hTRPM4 transient receptor potential cation channel subfamily M member 4 protein-coding chr9-5007 chr9 23553451 23553661 + 5.89 0.000 intron (NR_121602, intron 12 of 27) intron (NR_121602, intron 12 of 27) 118843 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr17-6746 chr17 82567750 82567960 + 5.89 0.000 intron (NM_004514, intron 2 of 8) intron (NM_004514, intron 2 of 8) 48123 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr1-11685 chr1 4619812 4620022 + 5.89 0.000 Intergenic AluJb|SINE|Alu -34692 NM_001042478 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chrX-3160 chrX 23925653 23925863 + 5.89 0.000 intron (NM_001169574, intron 5 of 8) intron (NM_001169574, intron 5 of 8) 17752 NM_152761 254158 Hs.351265 NM_152761 ENSG00000165182 CXorf58 - chromosome X open reading frame 58 protein-coding chr11-9773 chr11 69538897 69539107 + 5.89 0.000 Intergenic Intergenic 53441 NR_120545 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chrX-2258 chrX 47562877 47563087 + 5.89 0.000 exon (NM_001654, exon 2 of 16) exon (NM_001654, exon 2 of 16) 1777 NM_001654 369 Hs.446641 NM_001654 ENSG00000078061 ARAF A-RAF|ARAF1|PKS2|RAFA1 A-Raf proto-oncogene, serine/threonine kinase protein-coding chr22-3256 chr22 45360461 45360671 + 5.89 0.000 intron (NM_148674, intron 17 of 24) FLAM_C|SINE|Alu 42123 NM_001349913 55007 Hs.265018 NM_017911 ENSG00000100376 FAM118A C22orf8 family with sequence similarity 118 member A protein-coding chr10-4674 chr10 130664350 130664560 + 5.89 0.000 Intergenic MER53|DNA|hAT 298213 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr12-6189 chr12 19394507 19394717 + 5.89 0.000 Intergenic Intergenic -44880 NM_153207 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr15-4892 chr15 76517924 76518134 + 5.89 0.000 intron (NR_148227, intron 23 of 32) intron (NR_148227, intron 23 of 32) -68618 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr11-8361 chr11 82497471 82497681 + 5.89 0.000 Intergenic L2c|LINE|L2 -93663 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr1-7366 chr1 20576193 20576403 + 5.89 0.000 Intergenic Intergenic -12799 NM_001785 978 Hs.466910 NM_001785 ENSG00000158825 CDA CDD cytidine deaminase protein-coding chr1-13452 chr1 3267588 3267798 + 5.89 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 139718 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr10-6204 chr10 33337412 33337622 + 5.89 0.000 Intergenic Intergenic -2612 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr4-6103 chr4 15161769 15161979 + 5.89 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) 159393 NM_001177384 132864 Hs.656937 NM_182485 ENSG00000137449 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding chr2-8578 chr2 137013480 137013690 + 5.89 0.000 intron (NM_001316349, intron 2 of 27) intron (NM_001316349, intron 2 of 27) 248040 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr19-6798 chr19 41704408 41704618 + 5.89 0.000 Intergenic Intergenic -4113 NM_004363 1048 Hs.709196 NM_004363 ENSG00000105388 CEACAM5 CD66e|CEA carcinoembryonic antigen related cell adhesion molecule 5 protein-coding chr17-7290 chr17 3943470 3943680 + 5.89 0.000 intron (NM_174955, intron 10 of 21) intron (NM_174955, intron 10 of 21) 20862 NM_174958 489 Hs.513870 NM_005173 ENSG00000074370 ATP2A3 SERCA3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 protein-coding chr1-11489 chr1 114106621 114106831 + 5.89 0.000 intron (NM_001366223, intron 3 of 7) intron (NM_001366223, intron 3 of 7) 45714 NM_205848 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr11-8045 chr11 23041540 23041750 + 5.89 0.000 Intergenic AluSz|SINE|Alu -181171 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding chr6-2529 chr6 5283286 5283496 + 5.89 0.000 intron (NM_006567, intron 1 of 6) AluSp|SINE|Alu 21878 NM_006567 10667 Hs.484547 NM_006567 ENSG00000145982 FARS2 COXPD14|FARS1|HSPC320|PheRS|SPG77|mtPheRS phenylalanyl-tRNA synthetase 2, mitochondrial protein-coding chr1-12118 chr1 164274678 164274888 + 5.89 0.000 Intergenic L1MA9|LINE|L1 -284577 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr5-7350 chr5 17876372 17876582 + 5.89 0.000 intron (NR_134286, intron 5 of 7) AluJr|SINE|Alu 69203 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr6-5420 chr6 156635088 156635298 + 5.89 0.000 Intergenic Intergenic -142662 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr10-5365 chr10 72953940 72954150 + 5.89 0.000 intron (NM_001318124, intron 1 of 3) intron (NM_001318124, intron 1 of 3) 761 NM_001318124 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chr20-2778 chr20 53544649 53544859 + 5.89 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -8016 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr5-8922 chr5 157665801 157666011 + 5.89 0.000 intron (NM_001308165, intron 2 of 5) Alu|SINE|Alu 5574 NM_001308165 11063 Hs.529462 NM_007017 ENSG00000039600 SOX30 - SRY-box transcription factor 30 protein-coding chr10-3858 chr10 22251714 22251924 + 5.89 0.000 promoter-TSS (NR_038921) promoter-TSS (NR_038921) -253 NR_038921 100130992 Hs.48501 NR_038921 LOC100130992 - uncharacterized LOC100130992 ncRNA chr2-13758 chr2 170421387 170421597 + 5.89 0.000 intron (NM_001083615, intron 22 of 33) intron (NM_001083615, intron 22 of 33) -70549 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr13-1507 chr13 19177151 19177361 + 5.89 0.000 exon (NM_006001, exon 4 of 5) exon (NM_006001, exon 4 of 5) 4568 NM_006001 7278 Hs.349695 NM_006001 ENSG00000198033 TUBA3C TUBA2|bA408E5.3 tubulin alpha 3c protein-coding chr18-1235 chr18 48326963 48327173 + 5.89 0.000 intron (NM_001371290, intron 5 of 9) intron (NM_001371290, intron 5 of 9) 48559 NM_001371291 chr12-5963 chr12 86381882 86382092 + 5.89 0.000 intron (NM_001351286, intron 3 of 7) THE1B|LTR|ERVL-MaLR -124688 NM_001351287 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding chr2-4602 chr2 113695439 113695649 + 5.89 0.000 Intergenic AluSz|SINE|Alu 25824 NR_039943 100616208 NR_039943 ENSG00000265429 MIR4782 - microRNA 4782 ncRNA chr18-2831 chr18 6711402 6711612 + 5.89 0.000 Intergenic Intergenic -18209 NM_001366231 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr20-4351 chr20 55399333 55399543 + 5.89 0.000 Intergenic L1MD1|LINE|L1 -23605 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA chr9-8726 chr9 132187310 132187520 + 5.89 0.000 intron (NM_032536, intron 2 of 7) intron (NM_032536, intron 2 of 7) 25357 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr3-11222 chr3 194836655 194836865 + 5.89 0.000 Intergenic Intergenic -68051 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr5-7004 chr5 154044748 154044958 + 5.89 0.000 intron (NM_001242336, intron 1 of 2) intron (NM_001242336, intron 1 of 2) 5886 NM_005927 4238 Hs.432818 NM_005927 ENSG00000037749 MFAP3 - microfibril associated protein 3 protein-coding chr9-7160 chr9 134112558 134112768 + 5.89 0.000 Intergenic AluSp|SINE|Alu -23419 NM_017588 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr1-14949 chr1 87361285 87361495 + 5.89 0.000 intron (NR_038324, intron 1 of 3) L1PA10|LINE|L1 10265 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr1-14548 chr1 52234441 52234651 + 5.89 0.000 intron (NM_007324, intron 3 of 17) intron (NM_007324, intron 3 of 17) 92452 NM_004799 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr4-7561 chr4 78477367 78477577 + 5.89 0.000 intron (NM_025074, intron 54 of 73) intron (NM_025074, intron 54 of 73) -74298 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr22-2668 chr22 36396000 36396210 + 5.89 0.000 Intergenic Intergenic -8038 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr7-6485 chr7 5931724 5931934 + 5.89 0.000 intron (NM_173565, intron 19 of 20) AluSq|SINE|Alu 33096 NM_015622 51622 Hs.530000 NM_015622 ENSG00000122674 CCZ1 C7orf28A|CCZ1A|CGI-43|H_DJ1163J12.2 CCZ1 homolog, vacuolar protein trafficking and biogenesis associated protein-coding chr20-1895 chr20 53688655 53688865 + 5.89 0.000 Intergenic AluY|SINE|Alu 80406 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr5-5425 chr5 136762546 136762756 + 5.89 0.000 Intergenic Intergenic -365546 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr13-3643 chr13 31437866 31438076 + 5.89 0.000 Intergenic Intergenic 237996 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr1-9591 chr1 44302531 44302741 + 5.89 0.000 intron (NM_001301698, intron 5 of 7) intron (NM_001301698, intron 5 of 7) -50077 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr7-9677 chr7 152718105 152718315 + 5.89 0.000 Intergenic AluSz6|SINE|Alu -41539 NR_146950 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr6-7393 chr6 50720602 50720812 + 5.89 0.000 intron (NM_172238, intron 3 of 7) intron (NM_172238, intron 3 of 7) 7163 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr14-2625 chr14 61953669 61953879 + 5.89 0.000 intron (NM_001367663, intron 1 of 7) LTR88c|LTR|Gypsy? 26079 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding chr3-9287 chr3 42336337 42336547 + 5.89 0.000 Intergenic Intergenic -70257 NM_000729 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr4-4943 chr4 126197952 126198162 + 5.89 0.000 Intergenic L1MCa|LINE|L1 690798 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr11-10396 chr11 113664131 113664341 + 5.89 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 42072 NM_001288752 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding chr16-6531 chr16 63461436 63461646 + 5.89 0.000 Intergenic Intergenic -1425103 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chrX-3162 chrX 24581017 24581227 + 5.89 0.000 intron (NM_004845, intron 5 of 7) L2c|LINE|L2 66225 NM_001163265 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr11-9506 chr11 63296068 63296278 + 5.89 0.000 intron (NM_001039752, intron 2 of 9) L1M2c|LINE|L1 6270 NM_001039752 387775 Hs.188982 NM_001039752 ENSG00000184999 SLC22A10 OAT5|hOAT5 solute carrier family 22 member 10 protein-coding chr21-1594 chr21 16054523 16054733 + 5.89 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -15860 NR_136541 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr10-6835 chr10 22297073 22297283 + 5.89 0.000 Intergenic ERVL-E-int|LTR|ERVL -19205 NM_001204062 100532731 Hs.380403 NM_001204062 ENSG00000269897 COMMD3-BMI1 BMI1|PCGF4|RNF51 COMMD3-BMI1 readthrough protein-coding chr7-8649 chr7 70834862 70835072 + 5.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR -297177 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr5-6707 chr5 66653851 66654061 + 5.89 0.000 intron (NM_001290228, intron 1 of 4) L2b|LINE|L2 57563 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chrX-1065 chrX 130579668 130579878 + 5.89 0.000 Intergenic L1M4a2|LINE|L1 84832 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr15-4072 chr15 69855702 69855912 + 5.89 0.000 Intergenic Intergenic 20573 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr1-8797 chr1 1749102 1749312 + 5.89 0.000 Intergenic Intergenic -3208 NM_182838 9906 Hs.655255 NM_182838 ENSG00000215790 SLC35E2A SLC35E2 solute carrier family 35 member E2A protein-coding chr11-8086 chr11 36524432 36524642 + 5.89 0.000 Intergenic AluJb|SINE|Alu -14265 NM_004620 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr9-7090 chr9 128224961 128225171 + 5.89 0.000 intron (NM_004408, intron 10 of 21) MIRc|SINE|MIR 19764 NR_029619 406978 NR_029619 ENSG00000207581 MIR199B MIRN199B|mir-199b microRNA 199b ncRNA chr19-4854 chr19 38580784 38580994 + 5.89 0.000 intron (NM_001042723, intron 100 of 104) MIR|SINE|MIR -15458 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr20-3384 chr20 36527952 36528162 + 5.89 0.000 3' UTR (NM_014902, exon 13 of 13) 3' UTR (NM_014902, exon 13 of 13) -13462 NM_181526 10398 Hs.504687 NM_006097 ENSG00000101335 MYL9 LC20|MLC-2C|MLC2|MRLC1|MYRL2 myosin light chain 9 protein-coding chr5-4441 chr5 2751045 2751255 + 5.89 0.000 promoter-TSS (NM_178569) promoter-TSS (NM_178569) 527 NM_001134222 153572 Hs.282089 NM_033267 ENSG00000170561 IRX2 IRXA2 iroquois homeobox 2 protein-coding chr21-1928 chr21 45402045 45402255 + 5.89 0.000 Intergenic Intergenic -3015 NM_130445 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr1-13448 chr1 3185979 3186189 + 5.89 0.000 intron (NM_022114, intron 1 of 16) CpG 58109 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr7-9429 chr7 133504988 133505198 + 5.89 0.000 intron (NM_021807, intron 9 of 17) intron (NM_021807, intron 9 of 17) 214212 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chrX-2421 chrX 76052463 76052673 + 5.89 0.000 Intergenic L1PA4|LINE|L1 -120361 NM_001300888 51260 Hs.370100 NM_016500 ENSG00000102390 PBDC1 CXorf26 polysaccharide biosynthesis domain containing 1 protein-coding chr9-7820 chr9 81959358 81959568 + 5.89 0.000 Intergenic Intergenic 15963 NM_207416 389762 Hs.522246 NM_207416 ENSG00000186788 SPATA31D3 FAM75D3 SPATA31 subfamily D member 3 protein-coding chr17-5100 chr17 4829182 4829392 + 5.89 0.000 Intergenic Intergenic -4053 NM_153827 50488 Hs.443417 NM_015716 ENSG00000141503 MINK1 B55|MAP4K6|MINK|YSK2|ZC3 misshapen like kinase 1 protein-coding chr12-6184 chr12 16600794 16601004 + 5.89 0.000 intron (NM_001001395, intron 1 of 3) intron (NM_001001395, intron 1 of 3) 4480 NM_001243611 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding chrX-3510 chrX 43698428 43698638 + 5.89 0.000 intron (NM_001270458, intron 4 of 15) L2a|LINE|L2 43626 NM_001270458 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr12-5708 chr12 113054299 113054509 + 5.89 0.000 Intergenic Intergenic -3453 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 RNF140|hDx-1 deltex E3 ubiquitin ligase 1 protein-coding chr2-5231 chr2 46684028 46684238 + 5.89 0.000 Intergenic Intergenic -14827 NM_014011 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chrX-3522 chrX 48904306 48904516 + 5.89 0.000 3' UTR (NM_001042498, exon 4 of 4) 3' UTR (NM_001042498, exon 4 of 4) 5919 NM_001167992 10084 Hs.534384 NM_005710 ENSG00000102103 PQBP1 MRX2|MRX55|MRXS3|MRXS8|NPW38|RENS1|SHS polyglutamine binding protein 1 protein-coding chr1-15643 chr1 163455039 163455249 + 5.89 0.000 Intergenic L2c|LINE|L2 -31953 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr16-5675 chr16 70588388 70588598 + 5.89 0.000 intron (NM_152456, intron 1 of 6) AluSq2|SINE|Alu 8594 NM_001172771 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr8-5214 chr8 116454363 116454573 + 5.89 0.000 Intergenic Intergenic -129409 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr2-12528 chr2 65776478 65776688 + 5.89 0.000 Intergenic Intergenic -343984 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2-10666 chr2 20986039 20986249 + 5.89 0.000 Intergenic Intergenic 57929 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr3-4717 chr3 59051011 59051221 + 5.89 0.000 Intergenic LTR12C|LTR|ERV1 -1084 NM_001351534 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr18-2714 chr18 65208056 65208266 + 5.89 0.000 Intergenic Intergenic -542091 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr2-14586 chr2 232324130 232324340 + 5.89 0.000 intron (NR_046476, intron 14 of 20) intron (NR_046476, intron 14 of 20) -54516 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr6-8214 chr6 135383445 135383655 + 5.89 0.000 intron (NM_017651, intron 22 of 27) AluYk11|SINE|Alu 114190 NM_001134831 54806 Hs.386684 NM_017651 ENSG00000135541 AHI1 AHI-1|JBTS3|ORF1|dJ71N10.1 Abelson helper integration site 1 protein-coding chr3-10725 chr3 154842895 154843105 + 5.89 0.000 Intergenic Intergenic -181124 NM_001354642 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chrX-3454 chrX 24672221 24672431 + 5.89 0.000 intron (NM_001163264, intron 1 of 7) intron (NM_001163264, intron 1 of 7) 561 NM_001163264 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chrX-1740 chrX 41361931 41362141 + 5.89 0.000 intron (NR_126093, intron 18 of 18) L2b|LINE|L2 27870 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr8-6389 chr8 54746156 54746366 + 5.89 0.000 Intergenic Intergenic 130165 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr12-7248 chr12 51773558 51773768 + 5.89 0.000 intron (NM_001369788, intron 19 of 25) L1MB8|LINE|L1 58254 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chr2-9176 chr2 214311405 214311615 + 5.89 0.000 intron (NR_047660, intron 14 of 14) L1PA17|LINE|L1 -99544 NM_001080500 402117 Hs.534834 NM_001080500 ENSG00000174453 VWC2L - von Willebrand factor C domain containing 2 like protein-coding chr15-2551 chr15 49776378 49776588 + 5.89 0.000 Intergenic Intergenic 155435 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr16-5698 chr16 78934963 78935173 + 5.89 0.000 intron (NM_001291997, intron 7 of 7) L1PA5|LINE|L1 665669 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr11-3662 chr11 118571978 118572188 + 5.89 0.000 promoter-TSS (NM_001142281) promoter-TSS (NM_001142281) -304 NM_001142281 372 Hs.33642 NM_001655 ENSG00000095139 ARCN1 COPD|SRMMD archain 1 protein-coding chr19-7028 chr19 50074157 50074367 + 5.89 0.000 intron (NR_138096, intron 3 of 4) intron (NR_138096, intron 3 of 4) 18347 NR_024228 100169958 Hs.723094 NR_024228 SNAR-A8 - small NF90 (ILF3) associated RNA A8 snRNA chr8-3669 chr8 14566811 14567021 + 5.89 0.000 intron (NM_139167, intron 1 of 7) LTR12C|LTR|ERV1 286594 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr2-13276 chr2 127787287 127787497 + 5.89 0.000 intron (NM_001006622, intron 1 of 5) SVA_F|Retroposon|SVA 23779 NM_001006623 55339 Hs.554831 NM_018383 ENSG00000136709 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding chr6-4892 chr6 91453913 91454123 + 5.89 0.000 Intergenic Intergenic -67642 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr6-5776 chr6 620168 620378 + 5.89 0.000 intron (NM_018303, intron 4 of 27) intron (NM_018303, intron 4 of 27) 36691 NM_148959 135458 Hs.669039 NM_148959 ENSG00000188996 HUS1B - HUS1 checkpoint clamp component B protein-coding chr17-8435 chr17 76629334 76629544 + 5.89 0.000 exon (NM_018414, exon 2 of 9) exon (NM_018414, exon 2 of 9) 14318 NM_018414 55808 Hs.105352 NM_018414 ENSG00000070526 ST6GALNAC1 HSY11339|SIAT7A|ST6GalNAcI|STYI ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 protein-coding chr3-10126 chr3 113392284 113392494 + 5.89 0.000 intron (NM_001164496, intron 15 of 34) L1MA3|LINE|L1 -11609 NR_046728 100874029 Hs.599665 NR_046728 ENSG00000243849 CFAP44-AS1 WDR52-AS1 CFAP44 antisense RNA 1 ncRNA chr9-7505 chr9 32247746 32247956 + 5.89 0.000 Intergenic MIR3|SINE|MIR -136752 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr18-2027 chr18 45256268 45256478 + 5.89 0.000 intron (NM_001371319, intron 4 of 23) intron (NM_001371319, intron 4 of 23) 43378 NM_001242692 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr4-3513 chr4 150219944 150220154 + 5.89 0.000 intron (NR_036614, intron 5 of 16) L2|LINE|L2 141604 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr5-6298 chr5 119515296 119515506 + 5.89 0.000 intron (NM_001199291, intron 18 of 24) intron (NM_001199291, intron 18 of 24) 62904 NM_001199291 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr9-7449 chr9 26641002 26641212 + 5.89 0.000 Intergenic Intergenic 251695 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr20-2352 chr20 14861339 14861549 + 5.89 0.000 intron (NM_001351663, intron 5 of 17) LTR33|LTR|ERVL 68074 NR_072988 100379174 Hs.407533 NR_037841 ENSG00000235914 MACROD2-AS1 BA318C17.1|NCRNA00186 MACROD2 antisense RNA 1 ncRNA chr8-7004 chr8 109064137 109064347 + 5.89 0.000 Intergenic Intergenic -22386 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr5-8425 chr5 127720516 127720726 + 5.89 0.000 intron (NM_001317938, intron 2 of 6) MSTA-int|LTR|ERVL-MaLR 17232 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr16-5570 chr16 46426134 46426344 + 5.89 0.000 Intergenic L1MCa|LINE|L1 142858 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr2-13988 chr2 190201831 190202041 + 5.89 0.000 3' UTR (NM_032321, exon 2 of 2) 3' UTR (NM_032321, exon 2 of 2) 21073 NM_001042519 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding chr3-10013 chr3 101163634 101163844 + 5.89 0.000 Intergenic Intergenic 156836 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr17-5759 chr17 60404775 60404985 + 5.89 0.000 Intergenic Intergenic -12747 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr9-6441 chr9 80212642 80212852 + 5.89 0.000 Intergenic MER52A|LTR|ERV1 237724 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr16-4231 chr16 18866384 18866594 + 5.89 0.000 intron (NM_015092, intron 23 of 62) intron (NM_015092, intron 23 of 62) 59915 NM_015092 23049 Hs.460179 NM_015092 ENSG00000157106 SMG1 61E3.4|ATX|LIP SMG1 nonsense mediated mRNA decay associated PI3K related kinase protein-coding chr22-3604 chr22 20227602 20227812 + 5.89 0.000 Intergenic Intergenic 21375 NR_026919 150197 Hs.635544 NM_152508 ENSG00000236499 LINC00896 - long intergenic non-protein coding RNA 896 ncRNA chr1-12242 chr1 216145034 216145244 + 5.89 0.000 intron (NM_206933, intron 21 of 71) MLT1O|LTR|ERVL-MaLR 72674 NR_125992 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chrX-4922 chrX 109696996 109697206 + 5.89 0.000 intron (NM_004458, intron 1 of 15) intron (NM_004458, intron 1 of 15) -35410 NR_158569 105373311 Hs.268785 NR_158569 LOC105373311 - uncharacterized LOC105373311 ncRNA chr14-3608 chr14 51843638 51843848 + 5.89 0.000 Intergenic Intergenic -16869 NM_001243773 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr8-2175 chr8 98535383 98535593 + 5.89 0.000 intron (NM_006281, intron 9 of 10) intron (NM_006281, intron 9 of 10) 108530 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr8-5650 chr8 109577000 109577210 + 5.89 0.000 intron (NM_001099754, intron 6 of 6) intron (NM_001099754, intron 6 of 6) 26354 NM_001363032 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr16-6840 chr16 82082773 82082983 + 5.89 0.000 intron (NM_002153, intron 3 of 4) MIRc|SINE|MIR 47625 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding chr18-2695 chr18 60251349 60251559 + 5.89 0.000 Intergenic MSTD|LTR|ERVL-MaLR 121321 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr18-3508 chr18 74394425 74394635 + 5.89 0.000 Intergenic Penelope1_Vert|LINE|Penelope -14918 NR_131977 101927606 Hs.623809 NR_131977 ENSG00000259779 LINC01922 - long intergenic non-protein coding RNA 1922 ncRNA chr8-4184 chr8 81335341 81335551 + 5.89 0.000 Intergenic Intergenic 54910 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding chr17-3219 chr17 6723557 6723767 + 5.89 0.000 Intergenic AluY|SINE|Alu -10241 NM_177550 284111 Hs.399496 NM_177550 ENSG00000141485 SLC13A5 EIEE25|INDY|NACT|mIndy solute carrier family 13 member 5 protein-coding chr1-10167 chr1 110106790 110107000 + 5.89 0.000 intron (NR_126382, intron 1 of 3) intron (NR_126382, intron 1 of 3) -5548 NM_203412 164153 Hs.374027 NM_203412 ENSG00000186150 UBL4B - ubiquitin like 4B protein-coding chr16-3539 chr16 35920892 35921102 + 5.89 0.000 Intergenic ALR/Alpha|Satellite|centr 174445 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA chr8-4046 chr8 61875432 61875642 + 5.89 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -14302 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr9-8502 chr9 124790926 124791136 + 5.89 0.000 intron (NM_182487, intron 2 of 7) intron (NM_182487, intron 2 of 7) -9843 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr2-8725 chr2 158619810 158620020 + 5.89 0.000 intron (NM_001005476, intron 4 of 20) L2c|LINE|L2 115087 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr4-8676 chr4 179899134 179899344 + 5.89 0.000 Intergenic Intergenic 1259910 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr17-6249 chr17 28387062 28387272 + 5.89 0.000 intron (NM_015077, intron 5 of 8) L2c|LINE|L2 15473 NM_015077 23098 Hs.743510 NM_015077 ENSG00000004139 SARM1 MyD88-5|SAMD2|SARM sterile alpha and TIR motif containing 1 protein-coding chr5-7348 chr5 17643307 17643517 + 5.89 0.000 Intergenic Intergenic 12226 NM_001355258 391769 NM_001355258 ENSG00000269466 H3.Y - histone cluster 2, H3c pseudogene protein-coding chr20-2092 chr20 22531110 22531320 + 5.89 0.000 Intergenic Intergenic 47427 NR_001558 140828 Hs.9842 NR_001558 ENSG00000259974 LINC00261 ALIEN|C20orf56|DEANR1|FALCOR|HCCDR1|NCRNA00261|TCONS_00027846|onco-lncRNA-17 long intergenic non-protein coding RNA 261 ncRNA chr6-7041 chr6 25910143 25910353 + 5.89 0.000 Intergenic Intergenic 15631 NM_001286125 10246 Hs.591802 NM_005835 ENSG00000112337 SLC17A2 NPT3 solute carrier family 17 member 2 protein-coding chr12-7454 chr12 63101920 63102130 + 5.89 0.000 Intergenic MER84|LTR|ERV1 50785 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr20-2738 chr20 50078447 50078657 + 5.89 0.000 Intergenic Intergenic 34598 NM_001282577 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr16-6826 chr16 81269682 81269892 + 5.89 0.000 intron (NM_017429, intron 6 of 10) intron (NM_017429, intron 6 of 10) 31098 NM_017429 53630 Hs.212172 NM_017429 ENSG00000135697 BCO1 BCDO|BCDO1|BCMO|BCMO1|BCO beta-carotene oxygenase 1 protein-coding chr11-8711 chr11 6397562 6397772 + 5.89 0.000 intron (NM_001257323, intron 10 of 12) L2b|LINE|L2 7024 NM_001257325 322 Hs.372840 NM_001164 ENSG00000166313 APBB1 FE65|MGC:9072|RIR amyloid beta precursor protein binding family B member 1 protein-coding chrX-2176 chrX 38849430 38849640 + 5.89 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -45652 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr14-4839 chr14 69457217 69457427 + 5.89 0.000 intron (NM_001252150, intron 6 of 6) AluSg|SINE|Alu -27406 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr10-7630 chr10 23374412 23374622 + 5.89 0.000 Intergenic LTR8B|LTR|ERV1 -29720 NM_001351306 256815 Hs.132442 NM_153714 ENSG00000179133 C10orf67 C10orf115|LINC01552 chromosome 10 open reading frame 67 protein-coding chr21-1495 chr21 41630407 41630617 + 5.89 0.000 Intergenic Intergenic -48790 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr13-1684 chr13 76917712 76917922 + 5.89 0.000 Intergenic L1PBa1|LINE|L1 -10634 NR_026983 690 Hs.567241 NR_026983 BTF3P11 BTF3L1|HUMBTFB|OCIF|OPG|TNFRSF11B basic transcription factor 3 pseudogene 11 pseudo chr15-1951 chr15 33613049 33613259 + 5.89 0.000 intron (NM_001243996, intron 18 of 102) intron (NM_001243996, intron 18 of 102) 302187 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr2-12974 chr2 104875155 104875365 + 5.89 0.000 Intergenic L1MB3|LINE|L1 -2665 NR_110373 102682016 Hs.638438 NR_110373 ENSG00000229743 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA chr3-2267 chr3 58289886 58290096 + 5.89 0.000 intron (NM_001320126, intron 9 of 9) SVA_D|Retroposon|SVA -16254 NM_007042 11102 Hs.446320 NM_007042 ENSG00000163684 RPP14 P14 ribonuclease P/MRP subunit p14 protein-coding chr1-12264 chr1 225649929 225650139 + 5.89 0.000 intron (NM_001008493, intron 1 of 14) intron (NM_001008493, intron 1 of 14) 3089 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr6-6141 chr6 167242500 167242710 + 5.89 0.000 Intergenic HERVL-int|LTR|ERVL 14305 NR_157263 112590798 NR_157263 HPAT5 - human pluripotency-associated transcript 5 ncRNA chr13-1467 chr13 83859230 83859440 + 5.89 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 23058 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr14-5285 chr14 100636536 100636746 + 5.89 0.000 Intergenic Intergenic -20627 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chr14-4782 chr14 64836129 64836339 + 5.89 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) -12854 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr3-9489 chr3 50403275 50403485 + 5.89 0.000 intron (NM_001291101, intron 3 of 37) intron (NM_001291101, intron 3 of 37) 38017 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr9-7960 chr9 91581802 91582012 + 5.89 0.000 Intergenic AluSc|SINE|Alu -54344 NR_037472 100500821 NR_037472 ENSG00000266855 MIR3910-1 mir-3910-1 microRNA 3910-1 ncRNA chr13-1838 chr13 90202105 90202315 + 5.89 0.000 Intergenic LTR38|LTR|ERV1 -28972 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr4-5494 chr4 78418787 78418997 + 5.89 0.000 intron (NM_001166133, intron 32 of 41) intron (NM_001166133, intron 32 of 41) 129907 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA chr5-8566 chr5 136433876 136434086 + 5.89 0.000 Intergenic Intergenic -68505 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr1-8898 chr1 6065628 6065838 + 5.89 0.000 intron (NM_001199862, intron 2 of 15) intron (NM_001199862, intron 2 of 15) 19845 NM_001199863 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr12-6882 chr12 21233578 21233788 + 5.89 0.000 intron (NM_006446, intron 14 of 14) HUERS-P1-int|LTR|ERV1 101234 NM_021094 6579 Hs.46440 NM_005075 ENSG00000084453 SLCO1A2 OATP|OATP-A|OATP1A2|SLC21A3 solute carrier organic anion transporter family member 1A2 protein-coding chr4-7387 chr4 61525602 61525812 + 5.89 0.000 intron (NM_001371343, intron 4 of 23) L2c|LINE|L2 323535 NM_001371342 chr11-10626 chr11 125334869 125335079 + 5.89 0.000 intron (NM_022062, intron 3 of 12) MIRb|SINE|MIR -160240 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr18-3236 chr18 48117537 48117747 + 5.89 0.000 intron (NM_001371291, intron 4 of 6) MIRb|SINE|MIR 19506 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr5-8556 chr5 135896571 135896781 + 5.89 0.000 promoter-TSS (NM_000590) promoter-TSS (NM_000590) -835 NM_000590 3578 Hs.960 NM_000590 ENSG00000145839 IL9 HP40|IL-9|P40 interleukin 9 protein-coding chr5-4287 chr5 149693936 149694146 + 5.89 0.000 Intergenic Intergenic -36269 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chrX-4311 chrX 44408773 44408983 + 5.89 0.000 Intergenic Intergenic -65206 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding chr17-5769 chr17 61482430 61482640 + 5.89 0.000 intron (NM_018488, intron 7 of 7) intron (NM_018488, intron 7 of 7) 26047 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr4-5636 chr4 6974442 6974652 + 5.89 0.000 intron (NM_020773, intron 3 of 13) L1MEf|LINE|L1 -12662 NM_001113363 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr5-8039 chr5 91072982 91073192 + 5.89 0.000 intron (NR_003149, intron 86 of 89) UCON28a|Unknown|Unknown 241315 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr9-4906 chr9 7804334 7804544 + 5.89 0.000 Intergenic Intergenic -4661 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr8-5814 chr8 3634155 3634365 + 5.89 0.000 intron (NM_033225, intron 7 of 69) MER77|LTR|ERVL -905809 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr5-6336 chr5 134494583 134494793 + 5.89 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -11864 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LINC01843 - long intergenic non-protein coding RNA 1843 ncRNA chr4-2299 chr4 40339157 40339367 + 5.89 0.000 intron (NM_017581, intron 3 of 4) AluSx1|SINE|Alu 3929 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding chr8-6954 chr8 105974274 105974484 + 5.89 0.000 intron (NR_125797, intron 1 of 4) intron (NR_125797, intron 1 of 4) 86124 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr5-3084 chr5 38132323 38132533 + 5.89 0.000 intron (NR_147009, intron 2 of 2) L1PA15|LINE|L1 -16052 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA chr10-4078 chr10 47143568 47143778 + 5.89 0.000 Intergenic Intergenic -156524 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr8-5544 chr8 71866625 71866835 + 5.89 0.000 intron (NR_033651, intron 1 of 2) intron (NR_033651, intron 1 of 2) -22234 NM_005098 9242 Hs.442619 NM_005098 ENSG00000178860 MSC ABF-1|ABF1|MYOR|bHLHa22 musculin protein-coding chr16-4398 chr16 50311233 50311443 + 5.89 0.000 TTS (NM_001286057) TTS (NM_001286057) 18722 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chr5-7596 chr5 43075702 43075912 + 5.89 0.000 intron (NR_102752, intron 2 of 2) intron (NR_102752, intron 2 of 2) -8368 NR_104651 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA chr21-1405 chr21 45704757 45704967 + 5.89 0.000 intron (NM_001348238, intron 2 of 16) intron (NM_001348238, intron 2 of 16) 35988 NM_001348242 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr13-2834 chr13 108036301 108036511 + 5.89 0.000 Intergenic MIRc|SINE|MIR -168910 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding chr6-3392 chr6 57696367 57696577 + 5.89 0.000 Intergenic L2b|LINE|L2 240457 NR_133000 375513 Hs.561539 NM_206908 GUSBP4 C6orf216|GUSBL2|SMA3-L|SMAC3L GUSB pseudogene 4 pseudo chr22-3715 chr22 25227838 25228048 + 5.89 0.000 exon (NM_000496, exon 4 of 6) exon (NM_000496, exon 4 of 6) 8304 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding chr12-7197 chr12 49858271 49858481 + 5.89 0.000 Intergenic L1MC4|LINE|L1 -15270 NM_181708 144233 Hs.142736 NM_181708 ENSG00000186666 BCDIN3D - BCDIN3 domain containing RNA methyltransferase protein-coding chr10-7523 chr10 14076845 14077055 + 5.89 0.000 intron (NR_120638, intron 1 of 2) intron (NR_120638, intron 1 of 2) 2666 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr16-6850 chr16 82540282 82540492 + 5.89 0.000 Intergenic Intergenic -86582 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr6-7619 chr6 77936562 77936772 + 5.89 0.000 Intergenic L1ME3E|LINE|L1 283628 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr8-4482 chr8 118045631 118045841 + 5.89 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 66083 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr1-7040 chr1 177070182 177070392 + 5.89 0.000 intron (NM_207108, intron 1 of 21) intron (NM_207108, intron 1 of 21) -40842 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr11-7097 chr11 122661565 122661775 + 5.89 0.000 intron (NM_001363365, intron 1 of 13) MIRc|SINE|MIR 5948 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr22-3349 chr22 24222297 24222507 + 5.89 0.000 intron (NM_001302464, intron 10 of 11) intron (NM_001302464, intron 10 of 11) 22740 NM_001099782 2687 Hs.437156 NM_004121 ENSG00000099998 GGT5 GGL|GGT 5|GGT-REL|GGTLA1 gamma-glutamyltransferase 5 protein-coding chr11-7882 chr11 123822476 123822686 + 5.89 0.000 Intergenic MER4D|LTR|ERV1 -16232 NM_001005325 390261 Hs.557924 NM_001005325 ENSG00000196099 OR6M1 OR11-271 olfactory receptor family 6 subfamily M member 1 protein-coding chr4-6505 chr4 158652677 158652887 + 5.89 0.000 non-coding (NR_045583, exon 17 of 17) non-coding (NR_045583, exon 17 of 17) 19105 NM_001008393 201725 Hs.380920 NM_001008393 ENSG00000205208 C4orf46 RCDG1 chromosome 4 open reading frame 46 protein-coding chr13-3563 chr13 25411110 25411320 + 5.89 0.000 intron (NM_016529, intron 1 of 36) intron (NM_016529, intron 1 of 36) 39241 NM_016529 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr8-5361 chr8 20564093 20564303 + 5.89 0.000 Intergenic ERVL-E-int|LTR|ERVL 50728 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr11-10017 chr11 80984478 80984688 + 5.89 0.000 Intergenic L1M6|LINE|L1 -221780 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr12-5498 chr12 126430912 126431122 + 5.89 0.000 intron (NR_146291, intron 2 of 2) intron (NR_146291, intron 2 of 2) 4871 NR_146291 105370059 NR_146291 LINC02350 - long intergenic non-protein coding RNA 2350 ncRNA chr21-1071 chr21 31839284 31839494 + 5.89 0.000 Intergenic Intergenic -33631 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr17-6544 chr17 39944692 39944902 + 5.89 0.000 TTS (NM_001195545) TTS (NM_001195545) 3323 NM_001195545 100505591 Hs.145136 NM_001195545 ENSG00000204913 LRRC3C - leucine rich repeat containing 3C protein-coding chr16-3389 chr16 68052497 68052707 + 5.89 0.000 intron (NM_017803, intron 4 of 16) intron (NM_017803, intron 4 of 16) -28735 NM_018380 55794 Hs.458313 NM_018380 ENSG00000182810 DDX28 MDDX28 DEAD-box helicase 28 protein-coding chrX-2873 chrX 144940129 144940339 + 5.89 0.000 Intergenic MER52D|LTR|ERV1 -307269 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr6-5718 chr6 141265925 141266135 + 5.89 0.000 Intergenic Intergenic 582216 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr7-8225 chr7 33539352 33539562 + 5.89 0.000 intron (NM_001362679, intron 21 of 21) LTR18C|LTR|ERVL -365458 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr5-6302 chr5 121454196 121454406 + 5.89 0.000 Intergenic LTR16A|LTR|ERVL 131751 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr4-8064 chr4 122032190 122032400 + 5.89 0.000 Intergenic L1PA7|LINE|L1 -80235 NM_001130698 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr1-10113 chr1 100282779 100282989 + 5.89 0.000 intron (NM_003729, intron 8 of 10) AluSz|SINE|Alu 1643 NR_030279 693138 NR_030279 ENSG00000207750 MIR553 MIRN553|hsa-mir-553 microRNA 553 ncRNA chr5-8966 chr5 160670847 160671057 + 5.89 0.000 intron (NM_001366652, intron 5 of 24) AluSx4|SINE|Alu 14439 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr11-4120 chr11 37703056 37703266 + 5.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR -235440 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr3-10553 chr3 141015566 141015776 + 5.89 0.000 Intergenic Intergenic -35676 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr5-6396 chr5 144091382 144091592 + 5.89 0.000 Intergenic Intergenic 79172 NM_001271732 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding chr13-3878 chr13 51632900 51633110 + 5.89 0.000 intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 48543 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr21-1786 chr21 37955357 37955567 + 5.89 0.000 Intergenic MER1A|DNA|hAT-Charlie -39005 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr8-3845 chr8 31311005 31311215 + 5.89 0.000 Intergenic L1MEd|LINE|L1 -277754 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr4-7883 chr4 105147909 105148119 + 5.89 0.000 intron (NM_001127208, intron 1 of 10) (TC)n|Simple_repeat|Simple_repeat 1329 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr6-7722 chr6 89716428 89716638 + 5.89 0.000 intron (NM_014611, intron 44 of 101) intron (NM_014611, intron 44 of 101) -77786 NM_020466 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chr7-9192 chr7 116006228 116006438 + 5.89 0.000 intron (NM_012252, intron 1 of 7) THE1B-int|LTR|ERVL-MaLR 24430 NM_012252 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr3-5867 chr3 35206146 35206356 + 5.89 0.000 intron (NR_110817, intron 2 of 3) LTR78B|LTR|ERV1 187772 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr12-6633 chr12 281444 281654 + 5.89 0.000 3' UTR (NM_001042603, exon 28 of 28) 3' UTR (NM_001042603, exon 28 of 28) -18676 NM_001190997 6540 Hs.504398 NM_016615 ENSG00000010379 SLC6A13 GAT-2|GAT2|GAT3 solute carrier family 6 member 13 protein-coding chr20-2258 chr20 2733834 2734044 + 5.89 0.000 intron (NM_001110514, intron 7 of 17) L1M4|LINE|L1 41061 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr3-8202 chr3 44125971 44126181 + 5.89 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 11864 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr15-3857 chr15 88804453 88804663 + 5.89 0.000 intron (NM_001369268, intron 1 of 18) intron (NM_001369268, intron 1 of 18) 1115 NM_001135 176 Hs.2159 NM_001135 ENSG00000157766 ACAN AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD aggrecan protein-coding chr1-12384 chr1 7291987 7292197 + 5.89 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) 97662 NR_146201 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr6-5805 chr6 13674812 13675022 + 5.89 0.000 intron (NM_005493, intron 2 of 13) LTR3B_|LTR|ERVK 36918 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr8-3671 chr8 15292895 15293105 + 5.89 0.000 Intergenic L2c|LINE|L2 -54569 NM_139167 137868 Hs.545526 NM_139167 ENSG00000185053 SGCZ ZSG1 sarcoglycan zeta protein-coding chr9-6750 chr9 17514140 17514350 + 5.89 0.000 Intergenic AluJo|SINE|Alu -64821 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr8-4974 chr8 132090598 132090808 + 5.89 0.000 intron (NM_001145095, intron 6 of 15) intron (NM_001145095, intron 6 of 15) 14562 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr9-4635 chr9 112224736 112224946 + 5.89 0.000 intron (NM_001244896, intron 11 of 12) MLT1F|LTR|ERVL-MaLR -49544 NM_022486 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr9-4871 chr9 3161852 3162062 + 5.89 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -19632 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr14-3823 chr14 72208299 72208509 + 5.89 0.000 intron (NM_001370288, intron 2 of 16) MLT1K|LTR|ERVL-MaLR 274877 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr6-6622 chr6 150894517 150894727 + 5.89 0.000 intron (NM_001350486, intron 7 of 27) intron (NM_001350486, intron 7 of 27) 28136 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr13-1440 chr13 58130725 58130935 + 5.89 0.000 Intergenic L1PA10|LINE|L1 -34997 NR_120416 101926897 Hs.640215 NR_120416 ENSG00000277448 LINC02338 - long intergenic non-protein coding RNA 2338 ncRNA chr19-6749 chr19 39219622 39219832 + 5.89 0.000 Intergenic L2a|LINE|L2 -15461 NM_001080468 342898 Hs.124123 NM_001080468 ENSG00000179751 SYCN INSSA1|SYL syncollin protein-coding chr11-9310 chr11 45789582 45789792 + 5.89 0.000 Intergenic L1ME1|LINE|L1 -14385 NM_001145266 55343 Hs.12211 NM_018389 ENSG00000181830 SLC35C1 CDG2C|FUCT1 solute carrier family 35 member C1 protein-coding chr16-6215 chr16 28082483 28082693 + 5.89 0.000 Intergenic AluY|SINE|Alu -18874 NM_001323900 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr8-3367 chr8 48501728 48501938 + 5.89 0.000 Intergenic Intergenic -49734 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chrX-2908 chrX 151069726 151069936 + 5.89 0.000 Intergenic Intergenic 86446 NM_001301228 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr4-7090 chr4 32462993 32463203 + 5.89 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 112060 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr13-4052 chr13 75151405 75151615 + 5.89 0.000 Intergenic LTR16A2|LTR|ERVL 88871 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr10-4169 chr10 92990604 92990814 + 5.89 0.000 intron (NM_001319195, intron 18 of 21) L1PA10|LINE|L1 -70089 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr8-5307 chr8 142990338 142990548 + 5.89 0.000 intron (NR_026913, intron 1 of 1) (TG)n|Simple_repeat|Simple_repeat -5385 NR_102426 100128627 NR_102426 CDC42P3 - cell division cycle 42 pseudogene 3 pseudo chr17-5564 chr17 44822866 44823076 + 5.89 0.000 intron (NM_001080383, intron 1 of 2) intron (NM_001080383, intron 1 of 2) 7316 NM_005497 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr5-6051 chr5 176723497 176723707 + 5.89 0.000 Intergenic Intergenic -19603 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr15-4219 chr15 26765127 26765337 + 5.89 0.000 intron (NM_001278631, intron 3 of 9) intron (NM_001278631, intron 3 of 9) 7834 NM_000814 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr3-8666 chr3 179716924 179717134 + 5.89 0.000 intron (NM_003940, intron 6 of 20) intron (NM_003940, intron 6 of 20) 63989 NM_003940 8975 Hs.175322 NM_003940 ENSG00000058056 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 protein-coding chr2-10856 chr2 61617101 61617311 + 5.89 0.000 Intergenic AluJb|SINE|Alu -78850 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr10-4229 chr10 124221772 124221982 + 5.89 0.000 Intergenic Intergenic -128279 NM_001270764 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr6-8116 chr6 127182660 127182870 + 5.89 0.000 intron (NM_032784, intron 4 of 4) intron (NM_032784, intron 4 of 4) 64094 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr1-11598 chr1 214415865 214416075 + 5.89 0.000 intron (NM_005401, intron 3 of 18) intron (NM_005401, intron 3 of 18) 134811 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr1-16247 chr1 211211912 211212122 + 5.89 0.000 Intergenic MamRTE1|LINE|RTE-BovB -47260 NM_001350069 55758 Hs.356399 NM_018254 ENSG00000117625 RCOR3 - REST corepressor 3 protein-coding chr3-7355 chr3 50437422 50437632 + 5.89 0.000 intron (NM_001291101, intron 2 of 37) intron (NM_001291101, intron 2 of 37) 66107 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr5-9208 chr5 180630258 180630468 + 5.89 0.000 intron (NM_002020, intron 3 of 29) intron (NM_002020, intron 3 of 29) 19237 NM_182925 2324 Hs.646917 NM_002020 ENSG00000037280 FLT4 FLT-4|FLT41|LMPH1A|LMPHM1|PCL|VEGFR-3|VEGFR3 fms related tyrosine kinase 4 protein-coding chr1-9145 chr1 19284052 19284262 + 5.89 0.000 intron (NM_012067, intron 5 of 6) intron (NM_012067, intron 5 of 6) 4613 NM_012067 22977 Hs.6980 NM_012067 ENSG00000162482 AKR7A3 AFAR2 aldo-keto reductase family 7 member A3 protein-coding chr15-5129 chr15 89927397 89927607 + 5.89 0.000 Intergenic AluSx1|SINE|Alu -14550 NM_182616 348110 Hs.6734 NM_182616 ENSG00000242498 ARPIN C15orf38 actin related protein 2/3 complex inhibitor protein-coding chr5-8460 chr5 131708499 131708709 + 5.89 0.000 intron (NM_133372, intron 8 of 17) L2c|LINE|L2 -73375 NM_001164387 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr3-5576 chr3 6226246 6226456 + 5.89 0.000 Intergenic AluSx1|SINE|Alu 579098 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr6-7945 chr6 111216710 111216920 + 5.89 0.000 intron (NM_018593, intron 4 of 5) intron (NM_018593, intron 4 of 5) -42524 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr13-3188 chr13 110959279 110959489 + 5.89 0.000 Intergenic MER41-int|LTR|ERV1 -6643 NR_126378 104355135 Hs.649708 NR_126378 LINC00431 - long intergenic non-protein coding RNA 431 ncRNA chr3-6080 chr3 52140825 52141035 + 5.89 0.000 intron (NM_015426, intron 6 of 10) intron (NM_015426, intron 6 of 10) 13493 NM_001161580 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr1-9291 chr1 26011055 26011265 + 5.89 0.000 Intergenic MER74A|LTR|ERVL -10615 NM_004455 2134 Hs.150956 NM_004455 ENSG00000158008 EXTL1 EXTL exostosin like glycosyltransferase 1 protein-coding chr7-6437 chr7 159225328 159225538 + 5.89 0.000 Intergenic Intergenic -80476 NM_001304522 7434 Hs.585052 NM_003382 ENSG00000106018 VIPR2 C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R vasoactive intestinal peptide receptor 2 protein-coding chr5-8023 chr5 88932720 88932930 + 5.89 0.000 intron (NR_109941, intron 3 of 3) L2c|LINE|L2 -28720 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr8-5455 chr8 41873486 41873696 + 5.89 0.000 intron (NM_001142446, intron 1 of 42) MIRb|SINE|MIR 23150 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr5-8489 chr5 133199158 133199368 + 5.89 0.000 exon (NM_015082, exon 16 of 16) exon (NM_015082, exon 16 of 16) 147250 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr16-6694 chr16 70450913 70451123 + 5.89 0.000 Intergenic LTR12C|LTR|ERV1 -3577 NM_145059 197258 Hs.7907 NM_145059 ENSG00000157353 FCSK 1110046B12Rik|CDGF2|FUK fucose kinase protein-coding chr2-13010 chr2 107375997 107376207 + 5.89 0.000 Intergenic MER54B|LTR|ERVL -26577 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr18-2755 chr18 228678 228888 + 5.89 0.000 intron (NM_005131, intron 11 of 20) L2|LINE|L2 39264 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr2-13374 chr2 137353467 137353677 + 5.89 0.000 intron (NM_001316349, intron 12 of 27) intron (NM_001316349, intron 12 of 27) 574360 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr5-2550 chr5 176673081 176673291 + 5.89 0.000 Intergenic Intergenic 25702 NM_001366492 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr16-5558 chr16 30669613 30669823 + 5.89 0.000 3' UTR (NM_001105079, exon 18 of 18) 3' UTR (NM_001105079, exon 18 of 18) 11287 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding chr2-12613 chr2 71637204 71637414 + 5.89 0.000 intron (NM_001130987, intron 41 of 55) L2a|LINE|L2 170610 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr12-7614 chr12 79410560 79410770 + 5.89 0.000 intron (NM_001291901, intron 8 of 9) intron (NM_001291901, intron 8 of 9) -8592 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr4-5461 chr4 46887716 46887926 + 5.89 0.000 intron (NM_130902, intron 1 of 2) intron (NM_130902, intron 1 of 2) 21424 NM_130902 170712 Hs.479656 NM_130902 ENSG00000170516 COX7B2 - cytochrome c oxidase subunit 7B2 protein-coding chr12-7589 chr12 77115468 77115678 + 5.89 0.000 Intergenic Intergenic -50004 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr3-4615 chr3 10582703 10582913 + 5.89 0.000 intron (NM_001353564, intron 1 of 20) L2a|LINE|L2 37153 NM_001353564 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr2-14237 chr2 211637993 211638203 + 5.89 0.000 intron (NM_001042599, intron 16 of 26) intron (NM_001042599, intron 16 of 26) 788262 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr1-15041 chr1 93866775 93866985 + 5.89 0.000 3' UTR (NM_014597, exon 7 of 7) 3' UTR (NM_014597, exon 7 of 7) 12326 NM_014597 30836 Hs.85769 NM_014597 ENSG00000067334 DNTTIP2 ERBP|FCF2|HSU15552|LPTS-RP2|TdIF2 deoxynucleotidyltransferase terminal interacting protein 2 protein-coding chr8-6633 chr8 77620238 77620448 + 5.89 0.000 Intergenic MSTA|LTR|ERVL-MaLR 169646 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr19-3492 chr19 38584250 38584460 + 5.89 0.000 intron (NM_001042723, intron 100 of 104) intron (NM_001042723, intron 100 of 104) -11992 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr17-7456 chr17 14092212 14092422 + 5.89 0.000 intron (NM_001303, intron 3 of 6) intron (NM_001303, intron 3 of 6) 22813 NM_001303 1352 Hs.462278 NM_001303 ENSG00000006695 COX10 - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 protein-coding chr3-8300 chr3 60259892 60260102 + 5.89 0.000 intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) -179088 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr16-3063 chr16 57654997 57655207 + 5.89 0.000 intron (NM_001370429, intron 5 of 13) intron (NM_001370429, intron 5 of 13) -13204 NM_170776 222487 Hs.383403 NM_170776 ENSG00000182885 ADGRG3 GPR97|PB99|PGR26 adhesion G protein-coupled receptor G3 protein-coding chr10-6091 chr10 132108283 132108493 + 5.89 0.000 intron (NM_001323086, intron 2 of 23) intron (NM_001323086, intron 2 of 23) 42442 NM_001323087 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr8-4877 chr8 65067236 65067446 + 5.89 0.000 Intergenic AluSg|SINE|Alu 112999 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA chr4-6118 chr4 19262825 19263035 + 5.89 0.000 Intergenic Intergenic -988975 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr17-4711 chr17 30879650 30879860 + 5.89 0.000 intron (NM_024857, intron 18 of 22) AluY|SINE|Alu 26483 NM_024683 79736 Hs.317340 NM_024683 ENSG00000172171 TEFM C17orf42 transcription elongation factor, mitochondrial protein-coding chr11-5268 chr11 34343294 34343504 + 5.89 0.000 intron (NM_145804, intron 1 of 16) MER5B|DNA|hAT-Charlie 14611 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr12-7963 chr12 109826068 109826278 + 5.89 0.000 intron (NM_021625, intron 1 of 15) AluJb|SINE|Alu -7175 NR_039718 100616454 NR_039718 ENSG00000263510 MIR4497 mir-4497 microRNA 4497 ncRNA chr8-5841 chr8 6197537 6197747 + 5.89 0.000 Intergenic MER94|DNA|hAT-Blackjack 208906 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr17-8204 chr17 63520582 63520792 + 5.89 0.000 Intergenic Intergenic -2671 NM_001278920 81033 Hs.591177 NM_030779 ENSG00000173826 KCNH6 ERG-2|ERG2|HERG2|Kv11.2|hERG-2 potassium voltage-gated channel subfamily H member 6 protein-coding chr8-4659 chr8 135924129 135924339 + 5.89 0.000 Intergenic MER5B|DNA|hAT-Charlie 466778 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr10-5644 chr10 97113366 97113576 + 5.89 0.000 intron (NM_003061, intron 4 of 36) AluSq|SINE|Alu 10715 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr16-4397 chr16 50167371 50167581 + 5.89 0.000 intron (NM_001365324, intron 1 of 11) L1MD2|LINE|L1 13995 NM_001365324 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr17-5212 chr17 16312127 16312337 + 5.89 0.000 intron (NM_004278, intron 3 of 6) SVA_C|Retroposon|SVA 30218 NR_031698 100302124 NR_031698 ENSG00000221355 MIR1288 MIRN1288|hsa-mir-1288 microRNA 1288 ncRNA chr2-14377 chr2 219409749 219409959 + 5.89 0.000 Intergenic L2|LINE|L2 -8523 NM_001927 1674 Hs.594952 NM_001927 ENSG00000175084 DES CDCD3|CMD1F|CSM1|CSM2|LGMD1D|LGMD1E|LGMD2R desmin protein-coding chr8-6644 chr8 78695436 78695646 + 5.89 0.000 intron (NM_001362969, intron 5 of 9) intron (NM_001362969, intron 5 of 9) 28833 NR_077236 101241902 Hs.388511 NR_077236 LOC101241902 - chromosome 4 open reading frame 46 pseudogene pseudo chr5-4819 chr5 59900088 59900298 + 5.89 0.000 intron (NM_001165899, intron 3 of 16) AluSz|SINE|Alu -6467 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chrX-4264 chrX 40734044 40734254 + 5.89 0.000 intron (NM_004229, intron 1 of 30) intron (NM_004229, intron 1 of 30) -1247 NM_001289773 100873985 Hs.460579 NM_001289773 MED14OS MED14-AS1 MED14 opposite strand protein-coding KI270879.1-5 KI270879.1 240714 240924 + 5.89 0.000 NA NA NA NA chr17-2260 chr17 17427995 17428205 + 5.89 0.000 Intergenic LTR25-int|LTR|ERV1 -48900 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chrX-2311 chrX 54788646 54788856 + 5.89 0.000 intron (NM_198510, intron 4 of 12) intron (NM_198510, intron 4 of 12) 9504 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chrX-4057 chrX 19132866 19133076 + 5.89 0.000 Intergenic Intergenic -10334 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr5-7819 chr5 66603274 66603484 + 5.89 0.000 intron (NM_001290228, intron 1 of 4) intron (NM_001290228, intron 1 of 4) 6986 NM_001164664 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chrX-4077 chrX 21985261 21985471 + 5.89 0.000 intron (NM_004595, intron 9 of 10) intron (NM_004595, intron 9 of 10) 44657 NM_004595 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr1-16605 chr1 238087888 238088098 + 5.89 0.000 Intergenic THE1D|LTR|ERVL-MaLR -197071 NM_021186 57829 Hs.136241 NM_021186 ENSG00000116996 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding chr11-7312 chr11 58907224 58907434 + 5.89 0.000 5' UTR (NM_001354699, exon 2 of 8) 5' UTR (NM_001354699, exon 2 of 8) 1931 NM_001354699 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr13-2928 chr13 20339400 20339610 + 5.89 0.000 Intergenic Intergenic 94341 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr19-6854 chr19 43373540 43373750 + 5.89 0.000 Intergenic Intergenic -14966 NM_031451 83639 Hs.97978 NM_031451 ENSG00000131126 TEX101 CT131|GTPR867|NYD-SP8|PRO1884|SGRG|SPATA44|TES101RP testis expressed 101 protein-coding chr4-8253 chr4 139655480 139655690 + 5.89 0.000 Intergenic L2b|LINE|L2 -10183 NM_001204367 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr17-6718 chr17 80771767 80771977 + 5.89 0.000 intron (NM_020761, intron 6 of 33) AluJr|SINE|Alu 33760 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr12-6357 chr12 60486625 60486835 + 5.89 0.000 Intergenic Intergenic 797360 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr7-6813 chr7 33185849 33186059 + 5.89 0.000 intron (NM_198428, intron 5 of 22) intron (NM_198428, intron 5 of 22) 56390 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr15-1753 chr15 58392801 58393011 + 5.89 0.000 Intergenic MER39B|LTR|ERV1 -39085 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr21-1712 chr21 31985920 31986130 + 5.89 0.000 intron (NM_014586, intron 8 of 10) intron (NM_014586, intron 8 of 10) 100270 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr4-6726 chr4 4368834 4369044 + 5.89 0.000 Intergenic Intergenic -17317 NM_001287763 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr3-9042 chr3 23075431 23075641 + 5.89 0.000 Intergenic Intergenic 127042 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr3-7991 chr3 181508828 181509038 + 5.89 0.000 intron (NR_075091, intron 3 of 7) MIRb|SINE|MIR -66447 NR_125407 102724604 Hs.570524 NR_125407 ENSG00000241231 LOC102724604 - uncharacterized LOC102724604 ncRNA chr9-6710 chr9 3228003 3228213 + 5.89 0.000 intron (NM_134428, intron 17 of 17) intron (NM_134428, intron 17 of 17) 46519 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr21-1608 chr21 17746921 17747131 + 5.89 0.000 Intergenic MER34C2|LTR|ERV1 45483 NR_038871 246312 Hs.473425 NR_038870 ENSG00000240770 C21orf91-OT1 D21S2089E|NCRNA00285 C21orf91 overlapping transcript 1 ncRNA chr7-6514 chr7 27862013 27862223 + 5.89 0.000 intron (NM_175061, intron 3 of 4) HAL1|LINE|L1 122023 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr16-4364 chr16 46908833 46909043 + 5.89 0.000 intron (NM_001142466, intron 5 of 11) intron (NM_001142466, intron 5 of 11) -22464 NR_145840 109623466 NR_145840 SNORD148 - small nucleolar RNA, C/D box 148 snoRNA chr7-4953 chr7 141280238 141280448 + 5.89 0.000 intron (NM_001195278, intron 2 of 3) THE1B|LTR|ERVL-MaLR 206279 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr5-6122 chr5 31650432 31650642 + 5.89 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 11406 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr2-14677 chr2 236951384 236951594 + 5.89 0.000 Intergenic THE1B|LTR|ERVL-MaLR 104678 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr2-9489 chr2 236195209 236195419 + 5.89 0.000 intron (NM_212556, intron 5 of 5) intron (NM_212556, intron 5 of 5) -26928 NM_001485 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr8-6491 chr8 63839436 63839646 + 5.89 0.000 Intergenic Intergenic 70111 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr22-3233 chr22 41919744 41919954 + 5.89 0.000 Intergenic CpG 3448 NR_039760 100616259 NR_039760 ENSG00000283829 MIR378I - microRNA 378i ncRNA chr9-5263 chr9 79623694 79623904 + 5.89 0.000 intron (NM_001351563, intron 5 of 17) intron (NM_001351563, intron 5 of 17) 50622 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr14-5021 chr14 78285356 78285566 + 5.89 0.000 intron (NM_001366425, intron 3 of 19) MIRb|SINE|MIR 115088 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr1-9060 chr1 14930288 14930498 + 5.89 0.000 intron (NM_001370231, intron 2 of 8) intron (NM_001370231, intron 2 of 8) 593 NM_001018001 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr4-6850 chr4 9409895 9410105 + 5.89 0.000 Intergenic LTR12D|LTR|ERV1 -34534 NM_001040448 644414 Hs.590200 NM_001040448 ENSG00000186146 DEFB131A DEFB-31|DEFB131 defensin beta 131A protein-coding chr3-8391 chr3 98329470 98329680 + 5.89 0.000 Intergenic L1P4a|LINE|L1 -24279 NM_001005517 403278 Hs.554710 NM_001005517 ENSG00000196098 OR5K4 - olfactory receptor family 5 subfamily K member 4 protein-coding chr1-7945 chr1 178498445 178498655 + 5.89 0.000 Intergenic AluJb|SINE|Alu -14559 NM_032126 84066 Hs.534501 NM_032126 ENSG00000240021 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding chr9-8807 chr9 134511329 134511539 + 5.89 0.000 Intergenic L1MEd|LINE|L1 104874 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr6-7977 chr6 114167574 114167784 + 5.89 0.000 intron (NR_125845, intron 6 of 9) intron (NR_125845, intron 6 of 9) -104802 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr3-9002 chr3 18247533 18247743 + 5.89 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 177701 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr2-14669 chr2 236463305 236463515 + 5.89 0.000 intron (NR_073043, intron 6 of 19) intron (NR_073043, intron 6 of 19) 40287 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr10-5302 chr10 70105448 70105658 + 5.89 0.000 intron (NM_018649, intron 7 of 8) intron (NM_018649, intron 7 of 8) 27272 NM_032797 84883 Hs.650680 NM_032797 ENSG00000042286 AIFM2 AMID|PRG3 apoptosis inducing factor mitochondria associated 2 protein-coding chr10-8171 chr10 71273489 71273699 + 5.89 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -45659 NM_001363518 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr8-3460 chr8 95250964 95251174 + 5.89 0.000 intron (NM_001363260, intron 4 of 4) intron (NM_001363260, intron 4 of 4) -17767 NR_038209 100616530 Hs.554328 NR_038201 ENSG00000253773 C8orf37-AS1 - C8orf37 antisense RNA 1 ncRNA chr9-6140 chr9 35137080 35137290 + 5.89 0.000 Intergenic MER41-int|LTR|ERV1 -21323 NM_025182 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr13-3990 chr13 66887296 66887506 + 5.89 0.000 intron (NR_046527, intron 4 of 5) intron (NR_046527, intron 4 of 5) 62232 NR_046527 100874064 Hs.569284 NR_046527 ENSG00000228842 PCDH9-AS2 - PCDH9 antisense RNA 2 ncRNA chr2-7866 chr2 51745773 51745983 + 5.89 0.000 intron (NR_135237, intron 5 of 10) intron (NR_135237, intron 5 of 10) -624770 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr7-8503 chr7 52303801 52304011 + 5.89 0.000 Intergenic ERVL-B4-int|LTR|ERVL -731727 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr14-4214 chr14 96047178 96047388 + 5.89 0.000 intron (NM_001289139, intron 2 of 2) intron (NM_001289139, intron 2 of 2) 7921 NM_001282463 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr18-2535 chr18 78717228 78717438 + 5.89 0.000 Intergenic Intergenic -262942 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr6-7910 chr6 109225165 109225375 + 5.89 0.000 intron (NR_152435, intron 11 of 45) MLT1J|LTR|ERVL-MaLR 59439 NR_152435 221262 Hs.373914 NM_173671 ENSG00000203799 CCDC162P C6orf183|C6orf184|C6orf185|CCDC162 coiled-coil domain containing 162, pseudogene pseudo chr11-7906 chr11 131137032 131137242 + 5.89 0.000 Intergenic Intergenic -220650 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr20-1261 chr20 41340743 41340953 + 5.89 0.000 promoter-TSS (NR_126051) promoter-TSS (NR_126051) 27 NM_001301860 64900 Hs.25897 NM_022896 ENSG00000132793 LPIN3 LIPN3L|SMP2 lipin 3 protein-coding chr11-8995 chr11 23201978 23202188 + 5.89 0.000 Intergenic MER52D|LTR|ERV1 217107 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr2-13371 chr2 136910069 136910279 + 5.89 0.000 intron (NM_001316349, intron 2 of 27) intron (NM_001316349, intron 2 of 27) 144629 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr11-6103 chr11 35419346 35419556 + 5.89 0.000 5' UTR (NM_004171, exon 1 of 11) 5' UTR (NM_004171, exon 1 of 11) 107 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr9-8555 chr9 127109806 127110016 + 5.89 0.000 intron (NM_012098, intron 1 of 4) L2b|LINE|L2 12724 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr16-6687 chr16 70118941 70119151 + 5.89 0.000 intron (NM_001322117, intron 2 of 18) intron (NM_001322117, intron 2 of 18) 5420 NM_001322119 55066 Hs.744043 NM_017990 ENSG00000090857 PDPR PDP3 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding chr15-3546 chr15 101355560 101355770 + 5.89 0.000 intron (NM_138323, intron 13 of 13) intron (NM_138323, intron 13 of 13) 21228 NR_132373 105371027 NR_132373 ENSG00000259764 PCSK6-AS1 - PCSK6 antisense RNA 1 ncRNA chr2-11705 chr2 9695610 9695820 + 5.89 0.000 Intergenic AluSq2|SINE|Alu -64718 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chrX-4646 chrX 79244311 79244521 + 5.89 0.000 Intergenic L1M1|LINE|L1 73444 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr14-3715 chr14 19925286 19925496 + 5.89 0.000 Intergenic Intergenic 4784 NM_001005483 79317 Hs.554585 NM_001005483 ENSG00000176281 OR4K5 OR14-16 olfactory receptor family 4 subfamily K member 5 protein-coding chr16-6708 chr16 71803146 71803356 + 5.89 0.000 intron (NM_001128, intron 1 of 22) intron (NM_001128, intron 1 of 22) 5583 NM_001128 164 Hs.461253 NM_001128 ENSG00000166747 AP1G1 ADTG|CLAPG1 adaptor related protein complex 1 subunit gamma 1 protein-coding GL000216.2-21 GL000216.2 175105 175315 + 5.89 0.000 NA NA NA NA chr17-5919 chr17 74810539 74810749 + 5.89 0.000 intron (NM_017728, intron 8 of 9) intron (NM_017728, intron 8 of 9) 34145 NM_001321264 54868 Hs.370262 NM_017728 ENSG00000109066 TMEM104 - transmembrane protein 104 protein-coding chr11-8380 chr11 90577052 90577262 + 5.89 0.000 intron (NR_104190, intron 2 of 6) intron (NR_104190, intron 2 of 6) -21300 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA chr8-6778 chr8 93717395 93717605 + 5.89 0.000 intron (NM_001283034, intron 5 of 6) intron (NM_001283034, intron 5 of 6) 16950 NR_156452 137392 Hs.125038 NM_145269 ENSG00000188343 FAM92A FAM92A1|PAPA9 family with sequence similarity 92 member A protein-coding chrX-3014 chrX 56538338 56538548 + 5.89 0.000 Intergenic L1M1|LINE|L1 -25150 NM_013444 29978 Hs.179309 NM_013444 ENSG00000188021 UBQLN2 ALS15|CHAP1|DSK2|HRIHFB2157|N4BP4|PLIC2 ubiquilin 2 protein-coding chr10-7037 chr10 79915214 79915424 + 5.89 0.000 intron (NR_033857, intron 3 of 5) MER58B|DNA|hAT-Charlie -4859 NR_002724 8512 Hs.733579 NR_002724 ENSG00000242600 MBL1P COLEC3P|MBL1P1 mannose binding lectin 1, pseudogene pseudo chr19-6853 chr19 43361665 43361875 + 5.89 0.000 intron (NM_020406, intron 8 of 8) MSR1|Satellite|Satellite 8084 NM_020406 57126 Hs.232165 NM_020406 ENSG00000204936 CD177 HNA-2a|HNA2A|NB1|NB1 GP|PRV-1|PRV1 CD177 molecule protein-coding chr6-8513 chr6 159052227 159052437 + 5.89 0.000 Intergenic MER6A|DNA|TcMar-Tigger -7180 NM_152133 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chr6-2594 chr6 99349435 99349645 + 5.89 0.000 5' UTR (NM_032511, exon 1 of 6) 5' UTR (NM_032511, exon 1 of 6) 134 NM_032511 84553 Hs.573245 NM_032511 ENSG00000146267 FAXC C6orf168|dJ273F20 failed axon connections homolog, metaxin like GST domain containing protein-coding chr7-6415 chr7 155820161 155820371 + 5.89 0.000 Intergenic MIRc|SINE|MIR -7803 NM_000193 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr12-6930 chr12 25502223 25502433 + 5.89 0.000 intron (NM_001145729, intron 8 of 8) intron (NM_001145729, intron 8 of 8) 50955 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr1-11939 chr1 63594227 63594437 + 5.89 0.000 intron (NM_001172819, intron 1 of 10) intron (NM_001172819, intron 1 of 10) 523 NM_001172819 5236 Hs.1869 NM_002633 ENSG00000079739 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding chr12-5685 chr12 105816892 105817102 + 5.89 0.000 Intergenic Intergenic 110223 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr12-4783 chr12 53531031 53531241 + 5.89 0.000 intron (NR_073163, intron 9 of 12) intron (NR_073163, intron 9 of 12) 17152 NR_046221 100652999 Hs.633602 NR_046221 ENSG00000257550 LOC100652999 - uncharacterized LOC100652999 ncRNA chr5-7080 chr5 176187980 176188190 + 5.89 0.000 intron (NR_036494, intron 1 of 25) intron (NR_036494, intron 1 of 25) 11210 NR_036494 643201 Hs.390285 NR_036494 ENSG00000248596 LOC643201 - centrosomal protein 192kDa pseudogene pseudo chr2-3674 chr2 181506165 181506375 + 5.89 0.000 intron (NM_000885, intron 15 of 27) intron (NM_000885, intron 15 of 27) 48884 NM_000885 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr11-4350 chr11 73272037 73272247 + 5.89 0.000 promoter-TSS (NM_001277208) promoter-TSS (NM_001277208) 0 NM_001277208 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr2-10564 chr2 240225203 240225413 + 5.89 0.000 Intergenic Intergenic -84650 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr9-6935 chr9 97183801 97184011 + 5.89 0.000 intron (NR_136286, intron 10 of 17) AluSp|SINE|Alu -54520 NR_036526 100499484 Hs.435629 NR_036526 ENSG00000254876 SUGT1P4-STRA6LP - SUGT1P4-STRA6LP readthrough pseudo chr15-4629 chr15 62544545 62544755 + 5.89 0.000 Intergenic Intergenic 100531 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr8-6535 chr8 68203424 68203634 + 5.89 0.000 intron (NM_024870, intron 37 of 39) intron (NM_024870, intron 37 of 39) -126844 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr9-7590 chr9 36538814 36539024 + 5.89 0.000 Intergenic Intergenic -33943 NM_001256691 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr8-6634 chr8 77650871 77651081 + 5.89 0.000 Intergenic Intergenic 200279 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr15-3677 chr15 39719050 39719260 + 5.89 0.000 intron (NM_152597, intron 9 of 11) intron (NM_152597, intron 9 of 11) 63686 NM_152597 161835 Hs.129598 NM_152597 ENSG00000150667 FSIP1 HSD10 fibrous sheath interacting protein 1 protein-coding chr3-8573 chr3 155342233 155342443 + 5.89 0.000 Intergenic Intergenic -48655 NM_001352129 100507537 Hs.518341 NM_001352129 ENSG00000240045 STRIT1 DWORF small transmembrane regulator of ion transport 1 protein-coding chr17-8296 chr17 69455946 69456156 + 5.89 0.000 intron (NM_002758, intron 1 of 11) AluSq2|SINE|Alu 29481 NR_145982 105371880 NR_145982 LOC105371880 - uncharacterized LOC105371880 ncRNA chr11-4832 chr11 13339356 13339566 + 5.89 0.000 intron (NM_001351821, intron 3 of 19) L2a|LINE|L2 61734 NM_001351822 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr3-5590 chr3 7987393 7987603 + 5.89 0.000 intron (NR_110131, intron 2 of 3) LOR1b|LTR|ERV1 28809 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr11-3999 chr11 3658556 3658766 + 5.89 0.000 intron (NM_004314, intron 1 of 4) intron (NM_004314, intron 1 of 4) 12723 NM_001303035 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr3-10603 chr3 144343750 144343960 + 5.89 0.000 Intergenic AluSq|SINE|Alu 370774 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chrX-4769 chrX 96051996 96052206 + 5.89 0.000 Intergenic Intergenic 285801 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr2-14428 chr2 222049986 222050196 + 5.89 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -248056 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chrX-2713 chrX 121427870 121428080 + 5.89 0.000 Intergenic Intergenic 57003 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr10-8207 chr10 72525865 72526075 + 5.89 0.000 intron (NM_001363513, intron 5 of 12) intron (NM_001363513, intron 5 of 12) -1984 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr6-7163 chr6 37334119 37334329 + 5.89 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -19759 NM_003958 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr6-6936 chr6 15763939 15764149 + 5.89 0.000 Intergenic Intergenic -100986 NM_001271667 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chrX-5111 chrX 128388562 128388772 + 5.89 0.000 Intergenic L1PB2|LINE|L1 -336264 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr10-4883 chr10 18080420 18080630 + 5.89 0.000 Intergenic Intergenic -59899 NM_201596 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr17-3826 chr17 42497204 42497414 + 5.89 0.000 intron (NM_005177, intron 14 of 20) AluSz|SINE|Alu 2536 NR_049845 100847030 NR_049845 ENSG00000264314 MIR548AT - microRNA 548at ncRNA chr12-6209 chr12 24251940 24252150 + 5.89 0.000 intron (NM_001261414, intron 4 of 16) intron (NM_001261414, intron 4 of 16) 28774 NR_120472 101928471 Hs.569156 NR_120472 ENSG00000256120 SOX5-AS1 - SOX5 antisense RNA 1 ncRNA chr2-14615 chr2 234083542 234083752 + 5.89 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 32945 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr6-7871 chr6 106908216 106908426 + 5.89 0.000 Intergenic Intergenic 65718 NM_001291739 100133941 Hs.644105 NM_013230 ENSG00000272398 CD24 CD24A CD24 molecule protein-coding chr10-8540 chr10 93194046 93194256 + 5.89 0.000 Intergenic Intergenic 120258 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr3-10821 chr3 163353050 163353260 + 5.89 0.000 Intergenic L1PA5|LINE|L1 -49854 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr4-5433 chr4 16352946 16353156 + 5.89 0.000 Intergenic Intergenic 126388 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr10-8907 chr10 114859386 114859596 + 5.89 0.000 intron (NM_001135051, intron 14 of 16) intron (NM_001135051, intron 14 of 16) 37711 NM_020940 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding chr20-3444 chr20 49835534 49835744 + 5.89 0.000 intron (NR_048539, intron 3 of 13) L1MB8|LINE|L1 22811 NR_048538 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr2-6673 chr2 14968350 14968560 + 5.89 0.000 Intergenic FAM|SINE|Alu 335738 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr7-5579 chr7 47839511 47839721 + 5.89 0.000 exon (NM_138295, exon 36 of 57) exon (NM_138295, exon 36 of 57) 44325 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr1-12126 chr1 166980826 166981036 + 5.89 0.000 intron (NM_001286378, intron 1 of 12) intron (NM_001286378, intron 1 of 12) 5349 NM_001286378 84944 Hs.651245 NM_032858 ENSG00000143194 MAEL CT128|SPATA35 maelstrom spermatogenic transposon silencer protein-coding chr4-5692 chr4 26199590 26199800 + 5.89 0.000 Intergenic Intergenic -120015 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr7-5330 chr7 27254317 27254527 + 5.89 0.000 Intergenic AluJo|SINE|Alu -7193 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr10-7791 chr10 36325221 36325431 + 5.89 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger 547024 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr8-6514 chr8 66381346 66381556 + 5.89 0.000 Intergenic LTR16A|LTR|ERVL 47526 NR_040434 100505676 Hs.121613 NM_001242759 ENSG00000246145 RRS1-AS1 - RRS1 antisense RNA 1 (head to head) ncRNA chr7-9160 chr7 112710732 112710942 + 5.89 0.000 Intergenic MER76|LTR|ERVL 79556 NM_022484 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding chr1-15114 chr1 101390132 101390342 + 5.89 0.000 Intergenic Intergenic 66400 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr1-16055 chr1 201792513 201792723 + 5.89 0.000 intron (NM_020443, intron 13 of 29) intron (NM_020443, intron 13 of 29) -15993 NR_031599 100302158 NR_031599 ENSG00000221028 MIR1231 MIRN1231|hsa-mir-1231 microRNA 1231 ncRNA chr1-10717 chr1 194169019 194169229 + 5.89 0.000 Intergenic Intergenic 864379 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr9-6625 chr9 130485425 130485635 + 5.89 0.000 intron (NM_054012, intron 11 of 14) intron (NM_054012, intron 11 of 14) 40569 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr16-6177 chr16 25386462 25386672 + 5.89 0.000 Intergenic L1PA7|LINE|L1 -128722 NM_001012981 342357 Hs.513451 NM_001012981 ENSG00000155592 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding chr4-2363 chr4 3752846 3753056 + 5.89 0.000 Intergenic Intergenic -13434 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr17-5505 chr17 42081509 42081719 + 5.89 0.000 Intergenic AluSx1|SINE|Alu -31013 NM_001358661 110806298 Hs.127116 NM_001358661 ENSG00000267221 C17orf113 - chromosome 17 open reading frame 113 protein-coding chrX-5397 chrX 152134027 152134237 + 5.89 0.000 3' UTR (NM_001251828, exon 5 of 5) 3' UTR (NM_001251828, exon 5 of 5) 4445 NM_021048 4109 Hs.18048 NM_021048 ENSG00000124260 MAGEA10 CT1.10|MAGE10 MAGE family member A10 protein-coding chr18-3378 chr18 59238309 59238519 + 5.89 0.000 Intergenic Intergenic 18256 NM_002091 2922 Hs.153444 NM_002091 ENSG00000134443 GRP BN|GRP-10|preproGRP|proGRP gastrin releasing peptide protein-coding chr15-4574 chr15 59216089 59216299 + 5.89 0.000 intron (NM_004998, intron 10 of 27) intron (NM_004998, intron 10 of 27) 9351 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr1-14724 chr1 65184858 65185068 + 5.89 0.000 intron (NM_001330616, intron 1 of 4) intron (NM_001330616, intron 1 of 4) 35969 NM_001330616 205 Hs.10862 NM_013410 ENSG00000162433 AK4 AK 4|AK3|AK3L1|AK3L2 adenylate kinase 4 protein-coding chr4-7959 chr4 111756301 111756511 + 5.89 0.000 Intergenic Intergenic -389048 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr11-7562 chr11 23990563 23990773 + 5.89 0.000 Intergenic Intergenic -506385 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr2-11804 chr2 16850097 16850307 + 5.89 0.000 Intergenic LTR40b|LTR|ERVL -184368 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr6-4647 chr6 49596903 49597113 + 5.89 0.000 Intergenic Intergenic 39866 NM_000324 6005 Hs.120950 NM_000324 ENSG00000112077 RHAG CD241|OHS|OHST|RH2|RH50A|RHNR|Rh50|Rh50GP|SLC42A1 Rh associated glycoprotein protein-coding chr14-4303 chr14 21096498 21096708 + 5.89 0.000 intron (NM_001102454, intron 1 of 4) intron (NM_001102454, intron 1 of 4) 2052 NM_016423 51222 Hs.250493 NM_016423 ENSG00000165804 ZNF219 ZFP219 zinc finger protein 219 protein-coding chr11-9282 chr11 44853628 44853838 + 5.89 0.000 intron (NM_130783, intron 2 of 9) intron (NM_130783, intron 2 of 9) 96427 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr12-7787 chr12 97030310 97030520 + 5.89 0.000 Intergenic MIR|SINE|MIR 122949 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr5-8097 chr5 96655414 96655624 + 5.89 0.000 Intergenic L3b|LINE|CR1 -6518 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr4-8341 chr4 146956662 146956872 + 5.89 0.000 Intergenic LTR16B2|LTR|ERVL -10881 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr6-6846 chr6 8434498 8434708 + 5.89 0.000 intron (NM_001142541, intron 1 of 10) intron (NM_001142541, intron 1 of 10) 942 NM_001370478 51000 Hs.285847 NM_015948 ENSG00000124786 SLC35B3 C6orf196|CGI-19|PAPST2 solute carrier family 35 member B3 protein-coding chr17-7367 chr17 7170653 7170863 + 5.89 0.000 Intergenic AluSg7|SINE|Alu 8612 NM_001671 432 Hs.12056 NM_001671 ENSG00000141505 ASGR1 ASGPR|ASGPR1|CLEC4H1|HL-1 asialoglycoprotein receptor 1 protein-coding chr6-5696 chr6 122105261 122105471 + 5.89 0.000 Intergenic Intergenic -294185 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr11-6171 chr11 44716116 44716326 + 5.89 0.000 Intergenic Tigger19a|DNA|TcMar-Tigger -10741 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr3-9349 chr3 46536814 46537024 + 5.89 0.000 intron (NM_024512, intron 4 of 8) intron (NM_024512, intron 4 of 8) -20479 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr11-8673 chr11 3929731 3929941 + 5.89 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 73774 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr1-9874 chr1 66323961 66324171 + 5.89 0.000 intron (NM_001037340, intron 5 of 14) intron (NM_001037340, intron 5 of 14) -8042 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr7-9386 chr7 130977095 130977305 + 5.89 0.000 intron (NR_109851, intron 4 of 5) AluSq2|SINE|Alu 63736 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr14-5059 chr14 82950965 82951175 + 5.89 0.000 Intergenic LTR16A|LTR|ERVL 308438 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr17-4089 chr17 80009558 80009768 + 5.89 0.000 intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) 26209 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr3-9853 chr3 79597234 79597444 + 5.89 0.000 intron (NM_002941, intron 1 of 30) intron (NM_002941, intron 1 of 30) 89452 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA chr5-7254 chr5 11275476 11275686 + 5.89 0.000 intron (NM_001288715, intron 8 of 20) intron (NM_001288715, intron 8 of 20) 313336 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr9-7736 chr9 74622740 74622950 + 5.89 0.000 intron (NM_001365023, intron 1 of 9) MER5A1|DNA|hAT-Charlie 7311 NM_001365023 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr6-5317 chr6 143505412 143505622 + 5.89 0.000 intron (NM_032020, intron 2 of 6) AluJr|SINE|Alu 6203 NM_032020 2519 Hs.17680 NM_032020 ENSG00000001036 FUCA2 dJ20N2.5 alpha-L-fucosidase 2 protein-coding chrX-2675 chrX 117312520 117312730 + 5.89 0.000 Intergenic L1PB|LINE|L1 -494765 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr1-12192 chr1 201005369 201005579 + 5.89 0.000 intron (NM_001252103, intron 4 of 33) intron (NM_001252103, intron 4 of 33) 18240 NM_001252102 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr6-8079 chr6 124760713 124760923 + 5.89 0.000 intron (NM_001040214, intron 4 of 6) intron (NM_001040214, intron 4 of 6) -201727 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr17-4681 chr17 27508970 27509180 + 5.89 0.000 intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 37111 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr7-6769 chr7 17209107 17209317 + 5.89 0.000 Intergenic Intergenic -89440 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr18-3487 chr18 72417947 72418157 + 5.89 0.000 Intergenic Intergenic 126290 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr17-8166 chr17 61149481 61149691 + 5.89 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 218118 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chrX-3551 chrX 65596296 65596506 + 5.89 0.000 Intergenic Intergenic -43980 NR_033742 83957 Hs.652967 NR_033742 ENSG00000227942 FRMD8P1 - FERM domain containing 8 pseudogene 1 pseudo chr4-6233 chr4 62176981 62177191 + 5.89 0.000 Intergenic Intergenic -15321 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr16-6219 chr16 28251077 28251287 + 5.89 0.000 Intergenic L1ME4b|LINE|L1 -39217 NM_015171 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr2-9954 chr2 2083775 2083985 + 5.89 0.000 intron (NM_015025, intron 3 of 24) intron (NM_015025, intron 3 of 24) -235352 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr3-5632 chr3 10580508 10580718 + 5.89 0.000 intron (NM_001353564, intron 1 of 20) intron (NM_001353564, intron 1 of 20) 39348 NM_001353564 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr7-4606 chr7 22339332 22339542 + 5.89 0.000 intron (NM_012294, intron 1 of 25) intron (NM_012294, intron 1 of 25) 17717 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr2-11598 chr2 2311523 2311733 + 5.89 0.000 intron (NM_015025, intron 1 of 24) intron (NM_015025, intron 1 of 24) -7604 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr9-6565 chr9 121453387 121453597 + 5.89 0.000 Intergenic Intergenic 46535 NR_045211 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr11-10556 chr11 121432442 121432652 + 5.89 0.000 Intergenic Intergenic -19767 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr1-15523 chr1 156840772 156840982 + 5.89 0.000 exon (NM_014215, exon 22 of 22) exon (NM_014215, exon 22 of 22) 18240 NM_014215 3645 Hs.248138 NM_014215 ENSG00000027644 INSRR IRR insulin receptor related receptor protein-coding chr2-12786 chr2 86359125 86359335 + 5.89 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -21147 NM_001164730 65055 Hs.368884 NM_022912 ENSG00000068615 REEP1 C2orf23|HMN5B|SPG31|Yip2a receptor accessory protein 1 protein-coding chr3-10022 chr3 102343752 102343962 + 5.89 0.000 Intergenic MER34|LTR|ERV1 -91158 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr16-6015 chr16 8740320 8740530 + 5.89 0.000 intron (NM_020686, intron 2 of 15) MLT1F2|LTR|ERVL-MaLR 19712 NM_001127448 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr1-11687 chr1 5671202 5671412 + 5.89 0.000 Intergenic Intergenic 191434 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr9-7890 chr9 87960696 87960906 + 5.89 0.000 Intergenic Intergenic 13732 NM_001170639 23552 Hs.522274 NM_012119 ENSG00000156345 CDK20 CCRK|CDCH|P42|PNQALRE cyclin dependent kinase 20 protein-coding chr19-2213 chr19 39320550 39320760 + 5.89 0.000 Intergenic CpG -5319 NM_020862 57622 Hs.97860 NM_020862 ENSG00000128011 LRFN1 SALM2 leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr19-4149 chr19 33787910 33788120 + 5.89 0.000 Intergenic Intergenic -8855 NM_024076 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr17-7470 chr17 15092175 15092385 + 5.89 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 13907 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr1-7596 chr1 234916712 234916922 + 5.89 0.000 Intergenic Intergenic 47182 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr2-7561 chr2 24334473 24334683 + 5.89 0.000 intron (NM_001348182, intron 1 of 38) intron (NM_001348182, intron 1 of 38) 25958 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr13-4430 chr13 111072999 111073209 + 5.89 0.000 Intergenic L1MEf|LINE|L1 -22734 NR_120415 101927802 Hs.559193 NR_120415 LINC00368 - long intergenic non-protein coding RNA 368 ncRNA chr3-9260 chr3 39671725 39671935 + 5.89 0.000 Intergenic Intergenic -137084 NM_001284423 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr9-5259 chr9 79353834 79354044 + 5.89 0.000 Intergenic AluJb|SINE|Alu -208273 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr5-5203 chr5 113319698 113319908 + 5.89 0.000 intron (NM_001085377, intron 3 of 18) intron (NM_001085377, intron 3 of 18) -24865 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr17-5891 chr17 72540161 72540371 + 5.89 0.000 intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 52538 NR_137281 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chrX-3902 chrX 8498006 8498216 + 5.89 0.000 Intergenic Intergenic 33281 NM_001001888 425054 Hs.279737 NM_001001888 ENSG00000205642 VCX3B VCX-C|VCXC variable charge X-linked 3B protein-coding chr9-6108 chr9 138050397 138050607 + 5.89 0.000 intron (NM_001243812, intron 24 of 45) intron (NM_001243812, intron 24 of 45) -5431 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chr6-7519 chr6 65961306 65961516 + 5.89 0.000 Intergenic Intergenic 173532 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr3-8550 chr3 146640892 146641102 + 5.89 0.000 Intergenic Intergenic -34781 NM_001085420 389158 Hs.254692 NM_001085420 ENSG00000231213 PLSCR5 - phospholipid scramblase family member 5 protein-coding chr14-4754 chr14 62330009 62330219 + 5.89 0.000 Intergenic Intergenic -190141 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr1-16213 chr1 208624485 208624695 + 5.89 0.000 Intergenic Intergenic -104098 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr1-10309 chr1 151024611 151024821 + 5.89 0.000 exon (NM_021222, exon 4 of 8) exon (NM_021222, exon 4 of 8) -11870 NM_001159642 149428 Hs.591473 NM_138278 ENSG00000163141 BNIPL BNIP-S|BNIP-Salpha|BNIP-Sbeta|BNIPL-1|BNIPL-2|BNIPL1|BNIPL2|BNIPS|PP753 BCL2 interacting protein like protein-coding chr7-9284 chr7 125458202 125458412 + 5.89 0.000 Intergenic MER57A1|LTR|ERV1 -194016 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr6-8453 chr6 154031774 154031984 + 5.89 0.000 intron (NM_001145280, intron 1 of 3) intron (NM_001145280, intron 1 of 3) -7223 NM_000914 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr17-7613 chr17 27495547 27495757 + 5.89 0.000 intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 23688 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr10-6440 chr10 25194451 25194661 + 5.89 0.000 intron (NM_020752, intron 1 of 10) AluSx|SINE|Alu -18280 NR_027333 100128811 Hs.700407 NR_027333 ENSG00000233642 GPR158-AS1 - GPR158 antisense RNA 1 ncRNA chr2-6813 chr2 55923085 55923295 + 5.89 0.000 intron (NM_001039348, intron 1 of 11) intron (NM_001039348, intron 1 of 11) 592 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chr14-5304 chr14 101193743 101193953 + 5.89 0.000 Intergenic Intergenic 72992 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr2-11092 chr2 127119508 127119718 + 5.89 0.000 Intergenic SVA_F|Retroposon|SVA -12459 NM_139345 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr12-6719 chr12 5362692 5362902 + 5.89 0.000 Intergenic MIRc|SINE|MIR -69311 NM_001102654 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr1-15170 chr1 107921321 107921531 + 5.89 0.000 intron (NM_006113, intron 1 of 26) intron (NM_006113, intron 1 of 26) 24203 NR_107006 102465839 NR_107006 ENSG00000275455 MIR7852 hsa-mir-7852 microRNA 7852 ncRNA chr5-9207 chr5 180614129 180614339 + 5.89 0.000 intron (NM_002020, intron 23 of 29) intron (NM_002020, intron 23 of 29) -22735 NM_052863 92304 Hs.62492 NM_052863 ENSG00000161055 SCGB3A1 HIN-1|HIN1|LU105|PnSP-2|UGRP2 secretoglobin family 3A member 1 protein-coding chr7-4788 chr7 80833812 80834022 + 5.89 0.000 intron (NM_006379, intron 2 of 17) intron (NM_006379, intron 2 of 17) 85134 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr6-7334 chr6 45966471 45966681 + 5.89 0.000 intron (NM_001370649, intron 1 of 5) intron (NM_001370649, intron 1 of 5) -28979 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr3-9946 chr3 90075409 90075619 + 5.89 0.000 Intergenic Intergenic 967893 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr5-7450 chr5 31707728 31707938 + 5.89 0.000 intron (NM_178140, intron 1 of 24) AluJo|SINE|Alu 68702 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr17-5448 chr17 39569472 39569682 + 5.89 0.000 Intergenic Intergenic 38343 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr17-5153 chr17 8660470 8660680 + 5.89 0.000 Intergenic Intergenic -29814 NM_001256095 4628 Hs.16355 NM_005964 ENSG00000133026 MYH10 NMMHC-IIB|NMMHCB myosin heavy chain 10 protein-coding chr2-12274 chr2 45912637 45912847 + 5.89 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 261067 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr3-7051 chr3 173788669 173788879 + 5.89 0.000 intron (NM_001365928, intron 3 of 6) FAM|SINE|Alu 132022 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr13-2010 chr13 36218896 36219106 + 5.89 0.000 intron (NM_001198910, intron 6 of 15) AluJr|SINE|Alu -4386 NM_001282147 54937 Hs.124519 NM_017826 ENSG00000120669 SOHLH2 SOSF2|SPATA28|TEB1|bHLHe81 spermatogenesis and oogenesis specific basic helix-loop-helix 2 protein-coding chr1-11498 chr1 147086058 147086268 + 5.89 0.000 Intergenic LTR8|LTR|ERV1 -1407 NR_121645 101447996 NR_121645 ENSG00000286172 RNVU1-8 RNU1-145|vU1.8 RNA, variant U1 small nuclear 8 snRNA chr10-1727 chr10 100240903 100241113 + 5.89 0.000 intron (NM_001303404, intron 10 of 12) AluSg7|SINE|Alu -3706 NR_002954 677800 Hs.662165 NR_002954 ENSG00000212464 SNORA12 U108 small nucleolar RNA, H/ACA box 12 snoRNA chr21-1961 chr21 46121754 46121964 + 5.89 0.000 intron (NM_058174, intron 18 of 27) intron (NM_058174, intron 18 of 27) 23740 NM_058175 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr10-6284 chr10 92951165 92951375 + 5.89 0.000 intron (NM_001319195, intron 14 of 21) L2b|LINE|L2 102750 NM_019053 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr17-6153 chr17 81886320 81886530 + 5.89 0.000 Intergenic Intergenic -4365 NM_001289414 51529 Hs.534456 NM_016476 ENSG00000141552 ANAPC11 APC11|Apc11p|HSPC214 anaphase promoting complex subunit 11 protein-coding chr3-10012 chr3 100893639 100893849 + 5.89 0.000 intron (NM_001349332, intron 4 of 35) L2|LINE|L2 99746 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr19-2868 chr19 15177489 15177699 + 5.89 0.000 exon (NM_000435, exon 24 of 33) exon (NM_000435, exon 24 of 33) 1756 NR_106853 102465476 NR_106853 ENSG00000275711 MIR6795 hsa-mir-6795 microRNA 6795 ncRNA chr15-5112 chr15 89341534 89341744 + 5.89 0.000 Intergenic Intergenic -6815 NM_001126131 5428 Hs.706868 NM_002693 ENSG00000140521 POLG MDP1|MIRAS|MTDPS4A|MTDPS4B|PEO|POLG1|POLGA|SANDO|SCAE DNA polymerase gamma, catalytic subunit protein-coding chr20-4546 chr20 64291703 64291913 + 5.89 0.000 intron (NR_040415, intron 1 of 2) intron (NR_040415, intron 1 of 2) 1423 NR_040415 140849 Hs.745565 NR_040415 LINC00266-1 C20orf69|NCRNA00266|NCRNA00266-1|bA476I15.3 long intergenic non-protein coding RNA 266-1 ncRNA chr13-3372 chr13 79908575 79908785 + 5.89 0.000 intron (NR_120413, intron 1 of 5) intron (NR_120413, intron 1 of 5) 36094 NR_120413 101927195 Hs.342412 NR_120413 ENSG00000229175 LINC00382 TCONS_00021500 long intergenic non-protein coding RNA 382 ncRNA chr10-4440 chr10 70526321 70526531 + 5.89 0.000 intron (NM_014431, intron 2 of 19) intron (NM_014431, intron 2 of 19) 47659 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr3-10180 chr3 118551067 118551277 + 5.89 0.000 intron (NR_135547, intron 2 of 3) intron (NR_135547, intron 2 of 3) -90596 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr13-3160 chr13 99924708 99924918 + 5.89 0.000 intron (NR_120421, intron 1 of 4) AluJr|SINE|Alu 32352 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr19-6938 chr19 46802035 46802245 + 5.89 0.000 Intergenic Intergenic -13546 NM_005628 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding chr12-7768 chr12 95521872 95522082 + 5.89 0.000 intron (NR_144947, intron 2 of 3) intron (NR_144947, intron 2 of 3) 26261 NM_001278393 84101 Hs.646421 NM_032147 ENSG00000136014 USP44 - ubiquitin specific peptidase 44 protein-coding chr2-8395 chr2 113868437 113868647 + 5.89 0.000 intron (NR_110174, intron 1 of 4) intron (NR_110174, intron 1 of 4) -21392 NR_102318 10096 Hs.433512 NM_005721 ENSG00000115091 ACTR3 ARP3 actin related protein 3 protein-coding chr17-4311 chr17 80574103 80574313 + 5.89 0.000 intron (NM_020761, intron 1 of 33) AluYb8|SINE|Alu 29370 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr22-4280 chr22 49545185 49545395 + 5.89 0.000 intron (NR_110523, intron 1 of 4) L1MB8|LINE|L1 -1824 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr17-7244 chr17 1965764 1965974 + 5.89 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -51847 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr8-1732 chr8 144595956 144596166 + 5.89 0.000 intron (NM_025251, intron 1 of 10) intron (NM_025251, intron 1 of 10) 9634 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr12-4240 chr12 111798019 111798229 + 5.89 0.000 exon (NM_001204889, exon 9 of 12) exon (NM_001204889, exon 9 of 12) -1710 NR_106819 102465456 NR_106819 ENSG00000274697 MIR6761 hsa-mir-6761 microRNA 6761 ncRNA chr3-8647 chr3 176472112 176472322 + 5.89 0.000 Intergenic L1ME1|LINE|L1 -42886 NR_107017 102465858 NR_107017 ENSG00000283333 MIR7977 hsa-mir-7977 microRNA 7977 ncRNA chr22-3661 chr22 22851148 22851358 + 5.89 0.000 Intergenic Intergenic 28477 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr3-7791 chr3 86647914 86648124 + 5.89 0.000 Intergenic Intergenic 166076 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chrX-2619 chrX 108312180 108312390 + 5.89 0.000 intron (NM_001287758, intron 2 of 45) intron (NM_001287758, intron 2 of 45) 126137 NM_033641 1288 Hs.145586 NM_001847 ENSG00000197565 COL4A6 CXDELq22.3|DELXq22.3|DFNX6 collagen type IV alpha 6 chain protein-coding chr11-8959 chr11 20022984 20023194 + 5.89 0.000 intron (NM_001111019, intron 1 of 27) intron (NM_001111019, intron 1 of 27) 533 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr11-8347 chr11 78562209 78562419 + 5.89 0.000 intron (NM_024678, intron 4 of 13) AluJo|SINE|Alu 12550 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr5-7477 chr5 34001232 34001442 + 5.89 0.000 intron (NR_037951, intron 7 of 8) MER57B2|LTR|ERV1 6713 NM_014324 23600 Hs.508343 NM_014324 ENSG00000242110 AMACR AMACRD|CBAS4|P504S|RACE|RM alpha-methylacyl-CoA racemase protein-coding chr9-7114 chr9 130504723 130504933 + 5.89 0.000 Intergenic L1MEc|LINE|L1 59867 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr18-1950 chr18 36649602 36649812 + 5.89 0.000 intron (NM_001281740, intron 11 of 28) intron (NM_001281740, intron 11 of 28) 13711 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr3-9068 chr3 26173516 26173726 + 5.89 0.000 Intergenic L1PB1|LINE|L1 -299926 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr1-14151 chr1 32311490 32311700 + 5.89 0.000 intron (NM_004964, intron 2 of 13) L2|LINE|L2 19512 NM_004964 3065 Hs.88556 NM_004964 ENSG00000116478 HDAC1 GON-10|HD1|KDAC1|RPD3|RPD3L1 histone deacetylase 1 protein-coding chr1-9340 chr1 28540625 28540835 + 5.89 0.000 Intergenic Intergenic -12287 NR_003109 54952 Hs.533626 NM_017846 ENSG00000180098 TRNAU1AP PRO1902|SECP43|TRSPAP1 tRNA selenocysteine 1 associated protein 1 protein-coding chr17-5460 chr17 40056550 40056760 + 5.89 0.000 Intergenic Intergenic -2247 NR_052017 9862 Hs.462983 NM_014815 ENSG00000008838 MED24 ARC100|CRSP100|CRSP4|DRIP100|MED5|THRAP4|TRAP100 mediator complex subunit 24 protein-coding chr5-6214 chr5 72975537 72975747 + 5.89 0.000 intron (NM_001146032, intron 2 of 24) AluSz6|SINE|Alu 19601 NM_001146032 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chrX-5431 chrX 153674118 153674328 + 5.89 0.000 promoter-TSS (NM_001366977) promoter-TSS (NM_001366977) 138 NM_001039582 139728 Hs.436667 NM_198452 ENSG00000130822 PNCK BSTK3|CaMK1b pregnancy up-regulated nonubiquitous CaM kinase protein-coding chr4-6124 chr4 22621194 22621404 + 5.89 0.000 Intergenic L2a|LINE|L2 -71615 NM_020973 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr17-6242 chr17 21235948 21236158 + 5.89 0.000 Intergenic Intergenic 17357 NM_152914 256302 Hs.654713 NM_152914 ENSG00000274180 NATD1 C17orf103|Gtlf3b N-acetyltransferase domain containing 1 protein-coding chr17-3749 chr17 29449746 29449956 + 5.89 0.000 intron (NM_025142, intron 1 of 17) AluSz|SINE|Alu 58926 NM_020791 57551 Hs.597434 NM_020791 ENSG00000160551 TAOK1 KFC-B|MAP3K16|MARKK|PSK-2|PSK2|TAO1|hKFC-B|hTAOK1 TAO kinase 1 protein-coding chr20-3752 chr20 19262684 19262894 + 5.89 0.000 intron (NR_024564, intron 4 of 7) intron (NR_024564, intron 4 of 7) 21807 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr5-7049 chr5 168991846 168992056 + 5.89 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) -21276 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA GL000218.1-4 GL000218.1 41572 41782 + 5.89 0.000 NA NA NA NA chr4-5911 chr4 140973679 140973889 + 5.89 0.000 intron (NM_020724, intron 1 of 6) AluSx|SINE|Alu 159685 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr5-9019 chr5 166926371 166926581 + 5.89 0.000 promoter-TSS (NR_108020) promoter-TSS (NR_108020) -106 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr20-3019 chr20 49731586 49731796 + 5.89 0.000 Intergenic AluSx|SINE|Alu -17813 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr6-7364 chr6 48269662 48269872 + 5.89 0.000 Intergenic L1PA8|LINE|L1 -201078 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr8-7103 chr8 118745756 118745966 + 5.89 0.000 Intergenic Zaphod3|DNA|hAT-Tip100 -123898 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr2-13443 chr2 144097024 144097234 + 5.89 0.000 intron (NM_001354355, intron 7 of 13) intron (NM_001354355, intron 7 of 13) 114450 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr6-8090 chr6 125571662 125571872 + 5.89 0.000 Intergenic MER68C|LTR|ERVL -102586 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr6-4387 chr6 24279137 24279347 + 5.89 0.000 intron (NM_016356, intron 6 of 9) FLAM_A|SINE|Alu -77661 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr4-4466 chr4 55169091 55169301 + 5.89 0.000 Intergenic L1PA6|LINE|L1 -43601 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr13-3644 chr13 31442224 31442434 + 5.89 0.000 Intergenic Intergenic 242354 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chrX-5307 chrX 143255049 143255259 + 5.89 0.000 Intergenic MLT2D|LTR|ERVL 229226 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr3-6054 chr3 50505568 50505778 + 5.89 0.000 Intergenic Intergenic -1429 NM_001291101 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr14-3768 chr14 52577024 52577234 + 5.89 0.000 intron (NM_001353361, intron 1 of 7) AluSz|SINE|Alu 24293 NM_001099652 283554 Hs.416214 NM_001099652 ENSG00000180998 GPR137C TM7SF1L2 G protein-coupled receptor 137C protein-coding chr18-2429 chr18 23274086 23274296 + 5.89 0.000 Intergenic AluJb|SINE|Alu 118366 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr17-8077 chr17 53934836 53935046 + 5.89 0.000 Intergenic Intergenic 112014 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr1-15605 chr1 161131341 161131551 + 5.89 0.000 intron (NM_032998, intron 1 of 5) intron (NM_032998, intron 1 of 5) 1020 NM_001039712 9191 Hs.744092 NM_004216 ENSG00000158796 DEDD CASP8IP1|DEDD1|DEFT|FLDED1|KE05 death effector domain containing protein-coding chr15-3964 chr15 43350158 43350368 + 5.89 0.000 TTS (NM_001012969) TTS (NM_001012969) 19591 NM_001159280 161823 Hs.533913 NM_001012969 ENSG00000168803 ADAL - adenosine deaminase like protein-coding chr18-1645 chr18 57663609 57663819 + 5.89 0.000 intron (NM_005603, intron 20 of 27) L1MB2|LINE|L1 33383 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr6-7482 chr6 60698084 60698294 + 5.89 0.000 Intergenic Intergenic -875941 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr7-9207 chr7 116790034 116790244 + 5.89 0.000 intron (NM_000245, intron 19 of 20) L1PA10|LINE|L1 -72448 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr22-3362 chr22 28146618 28146828 + 5.89 0.000 intron (NM_001145418, intron 6 of 22) intron (NM_001145418, intron 6 of 22) -226111 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr7-7155 chr7 4988054 4988264 + 5.89 0.000 intron (NR_023384, intron 5 of 7) intron (NR_023384, intron 5 of 7) 14174 NR_023385 441191 Hs.520636 NR_015449 ENSG00000196204 RNF216P1 RNF216L|hCG2040556 ring finger protein 216 pseudogene 1 pseudo chr8-5965 chr8 20871773 20871983 + 5.89 0.000 Intergenic Intergenic -81755 NR_130774 102467222 Hs.444226 NR_130773 ENSG00000253147 LOC102467222 - uncharacterized LOC102467222 ncRNA chr5-5176 chr5 110368713 110368923 + 5.89 0.000 Intergenic LTR1D1|LTR|ERV1 145097 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr14-4243 chr14 101492662 101492872 + 5.89 0.000 Intergenic Intergenic 50691 NR_135240 100507277 Hs.123543 NR_135240 ENSG00000259082 LINC02314 - long intergenic non-protein coding RNA 2314 ncRNA chr3-9568 chr3 53780555 53780765 + 5.89 0.000 intron (NM_001128840, intron 38 of 47) intron (NM_001128840, intron 38 of 47) 65759 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr3-10684 chr3 150843477 150843687 + 5.89 0.000 Intergenic MER4C|LTR|ERV1 61857 NM_001351281 646951 Hs.380222 NM_001351281 MINDY4B C3orf76|FAM188B2 MINDY family member 4B protein-coding chr4-6279 chr4 80336654 80336864 + 5.89 0.000 intron (NM_152770, intron 1 of 5) intron (NM_152770, intron 1 of 5) 1039 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr10-4218 chr10 121503716 121503926 + 5.89 0.000 exon (NM_000141, exon 10 of 18) exon (NM_000141, exon 10 of 18) 27493 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr2-9492 chr2 236284149 236284359 + 5.89 0.000 Intergenic LTR79|LTR|ERVL -19909 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr14-3601 chr14 45878549 45878759 + 5.89 0.000 Intergenic MER6A|DNA|TcMar-Tigger -163052 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr13-3744 chr13 41928250 41928460 + 5.89 0.000 intron (NM_001009814, intron 2 of 25) L1MA9|LINE|L1 32730 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr6-8303 chr6 143956776 143956986 + 5.89 0.000 intron (NM_001289047, intron 2 of 3) intron (NM_001289047, intron 2 of 3) 4529 NM_001317157 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr5-6860 chr5 119742436 119742646 + 5.89 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 112982 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr3-6680 chr3 130968315 130968525 + 5.89 0.000 intron (NM_001001485, intron 16 of 27) intron (NM_001001485, intron 16 of 27) 58434 NM_001288950 28990 Hs.100878 NM_014065 ENSG00000034533 ASTE1 HT001 asteroid homolog 1 protein-coding chr1-13893 chr1 21871809 21872019 + 5.89 0.000 intron (NM_005529, intron 33 of 96) intron (NM_005529, intron 33 of 96) 59649 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr7-9737 chr7 157464925 157465135 + 5.89 0.000 Intergenic Intergenic -1201 NR_110157 101927914 Hs.623826 NR_110157 ENSG00000234210 LOC101927914 - uncharacterized LOC101927914 ncRNA chr1-14689 chr1 62342886 62343096 + 5.89 0.000 Intergenic Intergenic -23557 NM_001320269 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chr11-10719 chr11 131230763 131230973 + 5.89 0.000 Intergenic Intergenic -139747 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr9-7934 chr9 90057915 90058125 + 5.89 0.000 Intergenic Intergenic -16521 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr8-6088 chr8 26905876 26906086 + 5.89 0.000 Intergenic Intergenic -38703 NM_000680 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr16-6180 chr16 25686874 25687084 + 5.89 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -4980 NM_006040 9951 Hs.655275 NM_006040 ENSG00000182601 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate-glucosamine 3-sulfotransferase 4 protein-coding chr2-8510 chr2 128993173 128993383 + 5.89 0.000 Intergenic L1MD1|LINE|L1 128678 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr2-10130 chr2 69673772 69673982 + 5.89 0.000 intron (NM_001320698, intron 2 of 14) intron (NM_001320698, intron 2 of 14) 30069 NM_001320698 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr8-6804 chr8 95917223 95917433 + 5.89 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 31020 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr18-3227 chr18 47833529 47833739 + 5.89 0.000 3' UTR (NM_005901, exon 11 of 11) 3' UTR (NM_005901, exon 11 of 11) 97025 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr7-7465 chr7 91707715 91707925 + 5.89 0.000 Intergenic L1MA4A|LINE|L1 172882 NM_001301134 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr6-5333 chr6 145366028 145366238 + 5.89 0.000 Intergenic MIR1_Amn|SINE|MIR 320744 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr3-7319 chr3 33836546 33836756 + 5.89 0.000 intron (NM_001162429, intron 8 of 17) AluJb|SINE|Alu 38021 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr1-13195 chr1 207609797 207610007 + 5.89 0.000 intron (NM_000573, intron 29 of 38) MIR|SINE|MIR -35231 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr2-14667 chr2 236397247 236397457 + 5.89 0.000 intron (NR_073043, intron 9 of 19) intron (NR_073043, intron 9 of 19) 106345 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr5-7929 chr5 79078512 79078722 + 5.89 0.000 intron (NM_001178005, intron 2 of 6) MIRb|SINE|MIR 8850 NM_017614 23743 Hs.114172 NM_017614 ENSG00000132840 BHMT2 - betaine--homocysteine S-methyltransferase 2 protein-coding chr5-7567 chr5 40147982 40148192 + 5.89 0.000 Intergenic Intergenic 95796 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr18-1936 chr18 35343669 35343879 + 5.89 0.000 intron (NM_001308123, intron 1 of 3) intron (NM_001308123, intron 1 of 3) 646 NM_001308123 7572 Hs.514802 NM_006965 ENSG00000172466 ZNF24 KOX17|RSG-A|ZNF191|ZSCAN3|Zfp191 zinc finger protein 24 protein-coding chr7-4637 chr7 29518744 29518954 + 5.89 0.000 Intergenic L1ME3Cz|LINE|L1 35033 NM_001293081 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr20-3425 chr20 45153406 45153616 + 5.89 0.000 Intergenic Intergenic -21391 NM_002638 5266 Hs.112341 NM_002638 ENSG00000124102 PI3 ESI|SKALP|WAP3|WFDC14|cementoin peptidase inhibitor 3 protein-coding chr5-6237 chr5 85617140 85617350 + 5.89 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -665199 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chrX-4403 chrX 52923964 52924174 + 5.89 0.000 Intergenic Intergenic 25010 NM_001099684 727866 Hs.6451 NM_001099684 ENSG00000179304 FAM156B TMEM29B family with sequence similarity 156 member B protein-coding chr4-6192 chr4 47941874 47942084 + 5.89 0.000 intron (NM_000087, intron 9 of 10) intron (NM_000087, intron 9 of 10) -27312 NR_103795 152518 Hs.646325 NM_152995 ENSG00000170448 NFXL1 CDZFP|HOZFP|OZFP|URCC5 nuclear transcription factor, X-box binding like 1 protein-coding chr3-5991 chr3 48233346 48233556 + 5.89 0.000 Intergenic LTR2|LTR|ERV1 -7653 NM_016089 51385 Hs.172602 NM_016089 ENSG00000164048 ZNF589 SZF1 zinc finger protein 589 protein-coding chr14-2066 chr14 68682818 68683028 + 5.89 0.000 intron (NM_001321818, intron 10 of 10) (T)n|Simple_repeat|Simple_repeat -54136 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr1-14711 chr1 64418911 64419121 + 5.89 0.000 Intergenic Intergenic -51113 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr3-10265 chr3 124079362 124079572 + 5.89 0.000 Intergenic Intergenic -15214 NM_001322988 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr16-5271 chr16 56835696 56835906 + 5.89 0.000 intron (NM_014669, intron 16 of 21) intron (NM_014669, intron 16 of 21) -22717 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr2-14505 chr2 227655445 227655655 + 5.89 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -22230 NM_020161 56918 Hs.283092 NM_020161 ENSG00000042304 C2orf83 - chromosome 2 open reading frame 83 protein-coding chr1-14081 chr1 29890351 29890561 + 5.89 0.000 Intergenic Intergenic 147156 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr22-4068 chr22 42545014 42545224 + 5.89 0.000 Intergenic L1ME4b|LINE|L1 -8837 NM_001284334 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr1-9886 chr1 68117239 68117449 + 5.89 0.000 intron (NR_040077, intron 6 of 9) MIR3|SINE|MIR -65713 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding chr15-3645 chr15 82788745 82788955 + 5.89 0.000 intron (NM_001007122, intron 1 of 12) AluJr|SINE|Alu 17219 NM_001281805 123722 Hs.719372 NM_001007122 ENSG00000186628 FSD2 SPRYD1 fibronectin type III and SPRY domain containing 2 protein-coding chr16-6442 chr16 56878680 56878890 + 5.89 0.000 intron (NM_001126108, intron 9 of 25) intron (NM_001126108, intron 9 of 25) 13578 NM_000339 6559 Hs.669115 NM_000339 ENSG00000070915 SLC12A3 NCC|NCCT|TSC solute carrier family 12 member 3 protein-coding chr9-8046 chr9 96251844 96252054 + 5.89 0.000 intron (NM_000197, intron 4 of 10) intron (NM_000197, intron 4 of 10) 5486 NR_146524 105376162 Hs.662614 NR_146524 ENSG00000232283 HSD17B3-AS1 - HSD17B3 antisense RNA 1 ncRNA chr15-3649 chr15 86390986 86391196 + 5.89 0.000 intron (NM_152336, intron 17 of 24) L1ME1|LINE|L1 -74123 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr17-5079 chr17 4036900 4037110 + 5.89 0.000 intron (NM_015113, intron 39 of 54) L1MC4|LINE|L1 59902 NR_146884 105371496 Hs.579239 NR_146884 LINC01975 - long intergenic non-protein coding RNA 1975 ncRNA chr21-1164 chr21 42256194 42256404 + 5.89 0.000 intron (NM_207627, intron 3 of 15) intron (NM_207627, intron 3 of 15) 36401 NM_207174 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr8-4017 chr8 58536077 58536287 + 5.89 0.000 Intergenic MER44B|DNA|TcMar-Tigger -16742 NM_001348340 6386 Hs.200804 NM_005625 ENSG00000137575 SDCBP MDA-9|MDA9|ST1|SYCL|TACIP18 syndecan binding protein protein-coding chr2-12463 chr2 60338790 60339000 + 5.89 0.000 Intergenic Intergenic 44141 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr4-7911 chr4 107169695 107169905 + 5.89 0.000 Intergenic Intergenic -133487 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr4-6276 chr4 79575770 79575980 + 5.89 0.000 non-coding (NR_038826, exon 4 of 4) non-coding (NR_038826, exon 4 of 4) 83282 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr9-8073 chr9 98130758 98130968 + 5.89 0.000 intron (NM_003389, intron 7 of 11) intron (NM_003389, intron 7 of 11) -11641 NM_014788 9830 Hs.575631 NM_014788 ENSG00000106785 TRIM14 - tripartite motif containing 14 protein-coding chr5-8224 chr5 109122415 109122625 + 5.89 0.000 intron (NR_146155, intron 17 of 19) L1M1|LINE|L1 197914 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr8-1817 chr8 122695402 122695612 + 5.89 0.000 Intergenic L1MD2|LINE|L1 -1401 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr7-8605 chr7 67135570 67135780 + 5.89 0.000 intron (NR_134540, intron 12 of 14) intron (NR_134540, intron 12 of 14) -21278 NR_039793 100616310 NR_039793 ENSG00000266525 MIR4650-1 - microRNA 4650-1 ncRNA chr4-7705 chr4 89193907 89194117 + 5.89 0.000 Intergenic Intergenic 81195 NM_145715 166815 Hs.58924 NM_145715 ENSG00000180346 TIGD2 HEL106 tigger transposable element derived 2 protein-coding chr10-8855 chr10 111398079 111398289 + 5.89 0.000 Intergenic Intergenic 283893 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr14-4679 chr14 56358323 56358533 + 5.89 0.000 Intergenic Intergenic -155903 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr2-12517 chr2 64891138 64891348 + 5.89 0.000 Intergenic L1PA5|LINE|L1 -27612 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr15-4965 chr15 78983436 78983646 + 5.89 0.000 intron (NM_001145648, intron 23 of 26) intron (NM_001145648, intron 23 of 26) 4652 NR_148998 100129540 Hs.459035 NR_148998 ENSG00000177699 LOC100129540 - uncharacterized LOC100129540 ncRNA chr2-9742 chr2 74540579 74540789 + 5.89 0.000 intron (NM_032603, intron 4 of 13) AluJo|SINE|Alu -8336 NM_001197260 1796 Hs.103854 NM_001381 ENSG00000115325 DOK1 P62DOK|pp62 docking protein 1 protein-coding chr5-8036 chr5 90768689 90768899 + 5.89 0.000 intron (NR_003149, intron 59 of 89) intron (NR_003149, intron 59 of 89) 209997 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr7-6191 chr7 129779116 129779326 + 5.89 0.000 Intergenic CpG -4207 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr19-4135 chr19 19502912 19503122 + 5.89 0.000 intron (NM_001359631, intron 10 of 10) intron (NM_001359631, intron 10 of 10) 12531 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr5-8120 chr5 98643344 98643554 + 5.89 0.000 Intergenic Intergenic -125183 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr11-4851 chr11 26447054 26447264 + 5.89 0.000 intron (NM_031418, intron 3 of 26) AluJo|SINE|Alu -26743 NM_001313727 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr5-3000 chr5 4027441 4027651 + 5.89 0.000 Intergenic Intergenic 431714 NM_024337 79192 Hs.424156 NM_024337 ENSG00000170549 IRX1 IRX-5|IRXA1 iroquois homeobox 1 protein-coding chrX-555 chrX 18786772 18786982 + 5.89 0.000 intron (NM_152226, intron 12 of 17) intron (NM_152226, intron 12 of 17) -94190 NR_046642 100874004 NR_046642 PPEF1-AS1 - PPEF1 antisense RNA 1 ncRNA chr13-2745 chr13 97418893 97419103 + 5.89 0.000 Intergenic Intergenic -15171 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr6-7712 chr6 88532790 88533000 + 5.89 0.000 intron (NR_110867, intron 1 of 2) MER94|DNA|hAT-Blackjack 6474 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr3-5585 chr3 7263607 7263817 + 5.89 0.000 intron (NM_000844, intron 2 of 9) L1PREC2|LINE|L1 271572 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr1-9504 chr1 37777579 37777789 + 5.89 0.000 Intergenic MER21B|LTR|ERVL -12532 NM_173641 284656 Hs.129435 NM_173641 ENSG00000183317 EPHA10 - EPH receptor A10 protein-coding chr1-13088 chr1 182216918 182217128 + 5.89 0.000 intron (NR_104175, intron 2 of 2) intron (NR_104175, intron 2 of 2) 97038 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr1-6077 chr1 99004565 99004775 + 5.89 0.000 exon (NM_001010861, exon 1 of 6) intron (NR_033940, intron 1 of 2) 191 NM_001037317 163404 Hs.483948 NM_001010861 ENSG00000117598 PLPPR5 LPPR5|PAP2|PAP2D|PRG5 phospholipid phosphatase related 5 protein-coding chr7-3747 chr7 74371251 74371461 + 5.89 0.000 intron (NM_032421, intron 8 of 15) intron (NM_032421, intron 8 of 15) 81881 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr7-4294 chr7 23077525 23077735 + 5.89 0.000 Intergenic Intergenic 28073 NR_046220 100775104 NR_046220 ENSG00000230658 KLHL7-DT KLHL7-AS1|PLATAK KLHL7 divergent transcript ncRNA chr9-4161 chr9 7366289 7366499 + 5.89 0.000 Intergenic Intergenic 433384 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr11-9013 chr11 25120062 25120272 + 5.89 0.000 Intergenic Intergenic 623114 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr1-15426 chr1 152983478 152983688 + 5.89 0.000 promoter-TSS (NM_001199828) promoter-TSS (NM_001199828) -498 NM_005987 6698 Hs.46320 NM_005987 ENSG00000169474 SPRR1A SPRK small proline rich protein 1A protein-coding chr2-11576 chr2 1579589 1579799 + 5.89 0.000 Intergenic L1ME3|LINE|L1 164821 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr11-5994 chr11 20529865 20530075 + 5.89 0.000 Intergenic MIRb|SINE|MIR -69430 NM_001318369 9152 Hs.136557 NM_004211 ENSG00000165970 SLC6A5 GLYT-2|GLYT2|HKPX3|NET1 solute carrier family 6 member 5 protein-coding chr16-6026 chr16 9142407 9142617 + 5.89 0.000 Intergenic AluSx|SINE|Alu 50868 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr16-3439 chr16 89388152 89388362 + 5.89 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) -42661 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr1-14455 chr1 46917907 46918117 + 5.89 0.000 Intergenic L1PBa|LINE|L1 -17537 NR_002788 163720 Hs.591431 NR_002788 ENSG00000154198 CYP4Z2P - cytochrome P450 family 4 subfamily Z member 2, pseudogene pseudo chr22-1766 chr22 27617040 27617250 + 5.89 0.000 Intergenic AluJr|SINE|Alu 184611 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr4-7791 chr4 96938785 96938995 + 5.89 0.000 Intergenic Intergenic -428036 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr7-7520 chr7 104241288 104241498 + 5.89 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -33346 NM_181747 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chr11-8715 chr11 6653703 6653913 + 5.89 0.000 intron (NM_003737, intron 1 of 20) L2c|LINE|L2 2001 NM_003737 8642 Hs.199850 NM_003737 ENSG00000166341 DCHS1 CDH19|CDH25|CDHR6|FIB1|MVP2|PCDH16|VMLDS1 dachsous cadherin-related 1 protein-coding chr14-1161 chr14 51197520 51197730 + 5.89 0.000 Intergenic AluSp|SINE|Alu -42622 NM_030755 81542 Hs.125221 NM_030755 ENSG00000139921 TMX1 PDIA11|TMX|TXNDC|TXNDC1 thioredoxin related transmembrane protein 1 protein-coding chr22-4003 chr22 39552940 39553150 + 5.89 0.000 Intergenic Intergenic -17708 NM_021096 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr3-8533 chr3 142177814 142178024 + 5.89 0.000 intron (NM_001039547, intron 11 of 15) AluSp|SINE|Alu -28375 NM_001178138 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr9-8741 chr9 132750362 132750572 + 5.89 0.000 intron (NM_001317959, intron 13 of 14) intron (NM_001317959, intron 13 of 14) 80003 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr10-3042 chr10 124475496 124475706 + 5.89 0.000 intron (NM_001318332, intron 1 of 5) MIRb|SINE|MIR 13778 NM_001318331 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr6-5103 chr6 119842508 119842718 + 5.89 0.000 intron (NR_134600, intron 2 of 3) L1MA9|LINE|L1 -172566 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr7-8393 chr7 45267237 45267447 + 5.89 0.000 Intergenic Intergenic 109551 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr8-6960 chr8 106221732 106221942 + 5.89 0.000 Intergenic Intergenic -48341 NM_001198533 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr3-4920 chr3 194572389 194572599 + 5.89 0.000 Intergenic Intergenic -11774 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr20-3013 chr20 48799353 48799563 + 5.77 0.000 intron (NM_020820, intron 1 of 39) MamRep4096|DNA|hAT-Tip100 28541 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr22-3934 chr22 36982184 36982394 + 5.77 0.000 Intergenic Intergenic 17041 NR_038954 100506241 Hs.640023 NR_038954 ENSG00000215403 LL22NC01-81G9.3 - uncharacterized protein FLJ39582-like ncRNA chr19-5456 chr19 33532632 33532842 + 5.77 0.000 Intergenic Intergenic -10946 NM_001166056 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr8-3139 chr8 69671703 69671913 + 5.77 0.000 TTS (NM_001146009) TTS (NM_001146009) 78908 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr8-6866 chr8 100388072 100388282 + 5.77 0.000 Intergenic L2b|LINE|L2 5414 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr2-13659 chr2 161970146 161970356 + 5.77 0.000 intron (NM_001354443, intron 23 of 25) intron (NM_001354443, intron 23 of 25) 103964 NM_001935 1803 Hs.368912 NM_001935 ENSG00000197635 DPP4 ADABP|ADCP2|CD26|DPPIV|TP103 dipeptidyl peptidase 4 protein-coding chr3-4791 chr3 122857083 122857293 + 5.77 0.000 intron (NM_032839, intron 6 of 8) intron (NM_032839, intron 6 of 8) -29325 NR_024618 100129550 Hs.61558 NR_024618 ENSG00000273033 LINC02035 - long intergenic non-protein coding RNA 2035 ncRNA chr19-4682 chr19 17795378 17795588 + 5.77 0.000 intron (NM_014256, intron 1 of 2) CpG 345 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr18-3516 chr18 74740661 74740871 + 5.77 0.000 intron (NM_001146190, intron 2 of 3) intron (NM_001146190, intron 2 of 3) 109803 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr17-4746 chr17 40727567 40727777 + 5.77 0.000 Intergenic Intergenic -23920 NM_019016 192666 Hs.87383 NM_019016 ENSG00000167916 KRT24 K24|KA24 keratin 24 protein-coding chr12-6162 chr12 8809551 8809761 + 5.77 0.000 Intergenic HERVH-int|LTR|ERV1 -12965 NM_144670 144568 Hs.620532 NM_144670 ENSG00000166535 A2ML1 CPAMD9|OMS|p170 alpha-2-macroglobulin like 1 protein-coding chr2-5210 chr2 44742254 44742464 + 5.77 0.000 intron (NM_024766, intron 7 of 10) intron (NM_024766, intron 7 of 10) 196529 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr3-10240 chr3 123008978 123009188 + 5.77 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) -15810 NM_001256346 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr1-16600 chr1 237208130 237208340 + 5.77 0.000 intron (NM_001035, intron 1 of 104) intron (NM_001035, intron 1 of 104) 166051 NM_001035 6262 Hs.109514 NM_001035 ENSG00000198626 RYR2 ARVC2|ARVD2|RYR-2|RyR|VTSIP ryanodine receptor 2 protein-coding chr12-8199 chr12 123026882 123027092 + 5.77 0.000 intron (NM_020845, intron 2 of 24) MLT1C|LTR|ERVL-MaLR -16259 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chr21-1276 chr21 29704584 29704794 + 5.77 0.000 intron (NM_000830, intron 1 of 16) intron (NM_000830, intron 1 of 16) -43486 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA chr8-5414 chr8 29846577 29846787 + 5.77 0.000 Intergenic Intergenic -18178 NR_125817 101929470 Hs.204721 NR_125817 ENSG00000248964 LOC101929470 - uncharacterized LOC101929470 ncRNA chr1-12605 chr1 35877225 35877435 + 5.77 0.000 intron (NM_001317123, intron 1 of 18) intron (NM_001317123, intron 1 of 18) -5865 NM_001317122 26523 Hs.22867 NM_012199 ENSG00000092847 AGO1 EIF2C|EIF2C1|GERP95|Q99|hAgo1 argonaute RISC component 1 protein-coding chr18-2206 chr18 63433670 63433880 + 5.77 0.000 Intergenic Intergenic -11299 NM_004869 9525 Hs.126550 NM_004869 ENSG00000119541 VPS4B MIG1|SKD1|SKD1B|VPS4-2 vacuolar protein sorting 4 homolog B protein-coding chr9-6583 chr9 124793185 124793395 + 5.77 0.000 intron (NM_182487, intron 2 of 7) intron (NM_182487, intron 2 of 7) -7584 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr11-9761 chr11 69249673 69249883 + 5.77 0.000 Intergenic Intergenic -44377 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr3-10480 chr3 134828319 134828529 + 5.77 0.000 intron (NM_004441, intron 1 of 15) intron (NM_004441, intron 1 of 15) 33164 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr3-9755 chr3 69522531 69522741 + 5.77 0.000 Intergenic Intergenic -136548 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr3-8210 chr3 46211203 46211413 + 5.77 0.000 Intergenic AluJb|SINE|Alu -2995 NM_001295 1230 Hs.301921 NM_001295 ENSG00000163823 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 C-C motif chemokine receptor 1 protein-coding chr10-6085 chr10 131279682 131279892 + 5.77 0.000 intron (NM_174937, intron 3 of 11) intron (NM_174937, intron 3 of 11) 31934 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr9-8042 chr9 96048288 96048498 + 5.77 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -17446 NR_033838 158435 Hs.652615 NR_033838 LOC158435 - uncharacterized LOC158435 ncRNA chr14-4810 chr14 67684931 67685141 + 5.77 0.000 exon (NM_001252650, exon 5 of 6) exon (NM_001252650, exon 5 of 6) -10404 NM_006370 10490 Hs.741177 NM_006370 ENSG00000100568 VTI1B VTI1|VTI1-LIKE|VTI1L|VTI2|v-SNARE|vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding chrX-3763 chrX 130013928 130014138 + 5.77 0.000 exon (NM_001184772, exon 3 of 13) exon (NM_001184772, exon 3 of 13) 8845 NM_021946 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr14-5227 chr14 97836716 97836926 + 5.77 0.000 Intergenic Intergenic -73990 NR_146447 100132612 Hs.587781 NR_146447 ENSG00000258869 LINC02312 - long intergenic non-protein coding RNA 2312 ncRNA chr16-6576 chr16 66461757 66461967 + 5.77 0.000 intron (NM_001178020, intron 2 of 4) intron (NM_001178020, intron 2 of 4) 14540 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr11-6302 chr11 61605710 61605920 + 5.77 0.000 non-coding (NR_110189, exon 4 of 4) non-coding (NR_110189, exon 4 of 4) -9221 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr15-3664 chr15 100934817 100935027 + 5.77 0.000 intron (NM_024652, intron 2 of 33) intron (NM_024652, intron 2 of 33) 15565 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr5-3997 chr5 18955548 18955758 + 5.77 0.000 Intergenic L1MA9|LINE|L1 930619 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr1-10614 chr1 178493725 178493935 + 5.77 0.000 Intergenic Intergenic -19279 NM_032126 84066 Hs.534501 NM_032126 ENSG00000240021 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding chr5-7511 chr5 36076613 36076823 + 5.77 0.000 Intergenic AluJb|SINE|Alu -9836 NR_031764 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr17-4423 chr17 40676711 40676921 + 5.77 0.000 Intergenic Intergenic -11639 NM_152349 125113 Hs.6920 NM_152349 ENSG00000213424 KRT222 KA21|KRT222P keratin 222 protein-coding chrX-3682 chrX 106092316 106092526 + 5.77 0.000 Intergenic Intergenic -53694 NM_000354 6906 Hs.76838 NM_000354 ENSG00000123561 SERPINA7 TBG|TBGQTL serpin family A member 7 protein-coding chr5-7166 chr5 3925963 3926173 + 5.77 0.000 Intergenic Intergenic 330236 NM_024337 79192 Hs.424156 NM_024337 ENSG00000170549 IRX1 IRX-5|IRXA1 iroquois homeobox 1 protein-coding chr12-7716 chr12 91456664 91456874 + 5.77 0.000 Intergenic MIRc|SINE|MIR -273952 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr2-12148 chr2 38146233 38146443 + 5.77 0.000 intron (NR_027252, intron 2 of 2) intron (NR_027252, intron 2 of 2) 15233 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr2-8465 chr2 122830271 122830481 + 5.77 0.000 Intergenic ERVL-B4-int|LTR|ERVL 243105 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr22-4054 chr22 41917591 41917801 + 5.77 0.000 Intergenic Intergenic -2601 NM_001207020 440829 Hs.526704 NM_001207020 ENSG00000234965 SHISA8 C22orf17|Orf26 shisa family member 8 protein-coding chr1-6745 chr1 67376554 67376764 + 5.77 0.000 intron (NM_001319233, intron 13 of 15) intron (NM_001319233, intron 13 of 15) 53743 NM_001018067 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr1-16604 chr1 238062652 238062862 + 5.77 0.000 Intergenic Intergenic -171835 NM_021186 57829 Hs.136241 NM_021186 ENSG00000116996 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding chr10-8534 chr10 93096316 93096526 + 5.77 0.000 Intergenic AluSx|SINE|Alu 22528 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr9-7597 chr9 36788568 36788778 + 5.77 0.000 Intergenic Intergenic 34926 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr2-13157 chr2 119573191 119573401 + 5.77 0.000 intron (NR_073132, intron 6 of 24) intron (NR_073132, intron 6 of 24) 28847 NM_001271049 200373 Hs.496753 NM_001029996 ENSG00000163075 CFAP221 FAP221|PCDP1 cilia and flagella associated protein 221 protein-coding chr9-7929 chr9 89727948 89728158 + 5.77 0.000 Intergenic AluJb|SINE|Alu 88270 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr7-8359 chr7 44096160 44096370 + 5.77 0.000 Intergenic Intergenic -8080 NM_001129 165 Hs.439463 NM_001129 ENSG00000106624 AEBP1 ACLP AE binding protein 1 protein-coding chr16-6994 chr16 87558851 87559061 + 5.77 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat -42879 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr5-8288 chr5 113946465 113946675 + 5.77 0.000 Intergenic AluY|SINE|Alu -415500 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr5-5891 chr5 19395833 19396043 + 5.77 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 490334 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr6-4832 chr6 83366188 83366398 + 5.77 0.000 intron (NM_002395, intron 3 of 13) L2c|LINE|L2 64758 NM_002395 4199 Hs.21160 NM_002395 ENSG00000065833 ME1 HUMNDME|MES malic enzyme 1 protein-coding chr8-4338 chr8 100186899 100187109 + 5.77 0.000 intron (NM_003114, intron 7 of 18) MLT1B|LTR|ERVL-MaLR 28669 NM_003114 6674 Hs.591866 NM_003114 ENSG00000104450 SPAG1 CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS sperm associated antigen 1 protein-coding chr4-8068 chr4 122453774 122453984 + 5.77 0.000 intron (NM_000586, intron 2 of 3) intron (NM_000586, intron 2 of 3) 2616 NM_000586 3558 Hs.89679 NM_000586 ENSG00000109471 IL2 IL-2|TCGF|lymphokine interleukin 2 protein-coding chr3-5965 chr3 46733826 46734036 + 5.77 0.000 intron (NR_147121, intron 2 of 3) intron (NR_147121, intron 2 of 3) 2496 NR_147121 100287362 Hs.673244 NM_001205271 ENSG00000261603 PRSS46P PRSS46|TESSP6 serine protease 46, pseudogene pseudo chr20-2151 chr20 37468928 37469138 + 5.77 0.000 Intergenic Intergenic 51270 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr4-3623 chr4 10519928 10520138 + 5.77 0.000 intron (NM_052964, intron 15 of 18) intron (NM_052964, intron 15 of 18) -62607 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr1-11508 chr1 154061379 154061589 + 5.77 0.000 intron (NM_001159484, intron 18 of 37) intron (NM_001159484, intron 18 of 37) 43108 NR_049883 100847024 NR_049883 ENSG00000263987 MIR5698 - microRNA 5698 ncRNA chr1-13507 chr1 4901791 4902001 + 5.77 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 247287 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr12-7210 chr12 50158861 50159071 + 5.77 0.000 intron (NM_001331069, intron 1 of 11) intron (NM_001331069, intron 1 of 11) 8403 NM_001331073 91012 Hs.270525 NM_147190 ENSG00000139624 CERS5 LASS5|Trh4 ceramide synthase 5 protein-coding chr8-3109 chr8 40421487 40421697 + 5.77 0.000 Intergenic AluSz6|SINE|Alu -78229 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr14-4247 chr14 102479989 102480199 + 5.77 0.000 intron (NM_014844, intron 17 of 19) MIR|SINE|MIR 29682 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr1-14298 chr1 38720491 38720701 + 5.77 0.000 Intergenic Intergenic 139176 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr16-5181 chr16 6479903 6480113 + 5.77 0.000 intron (NM_018723, intron 2 of 15) AluSx1|SINE|Alu -293801 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr18-2844 chr18 7482355 7482565 + 5.77 0.000 Intergenic Intergenic -21454 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr2-6309 chr2 66213237 66213447 + 5.77 0.000 Intergenic AluJr|SINE|Alu 144986 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr1-15424 chr1 152670635 152670845 + 5.77 0.000 Intergenic Intergenic -4575 NM_178429 353140 Hs.553713 NM_178429 ENSG00000187180 LCE2C LEP11 late cornified envelope 2C protein-coding chr16-5779 chr16 88225217 88225427 + 5.77 0.000 Intergenic Intergenic 31041 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr11-10707 chr11 130552637 130552847 + 5.77 0.000 Intergenic MIR|SINE|MIR 103768 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr21-1606 chr21 16924130 16924340 + 5.77 0.000 Intergenic MER58B|DNA|hAT-Charlie 333998 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr5-5560 chr5 148582328 148582538 + 5.77 0.000 intron (NM_001040172, intron 1 of 5) L1PA16|LINE|L1 54628 NM_001040169 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr13-4384 chr13 108890925 108891135 + 5.77 0.000 intron (NM_015011, intron 14 of 34) intron (NM_015011, intron 14 of 34) 261419 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr12-7476 chr12 65109015 65109225 + 5.77 0.000 intron (NM_007191, intron 2 of 9) intron (NM_007191, intron 2 of 9) 12185 NM_007191 11197 Hs.284122 NM_007191 ENSG00000156076 WIF1 WIF-1 WNT inhibitory factor 1 protein-coding chr9-7393 chr9 19573651 19573861 + 5.77 0.000 intron (NM_020344, intron 5 of 9) intron (NM_020344, intron 5 of 9) 164747 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr5-3609 chr5 121357877 121358087 + 5.77 0.000 Intergenic Intergenic 35432 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr15-4174 chr15 95353830 95354040 + 5.77 0.000 Intergenic Intergenic -26835 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr11-9263 chr11 44055380 44055590 + 5.77 0.000 intron (NM_001031854, intron 9 of 13) intron (NM_001031854, intron 9 of 13) 7504 NM_001031854 390110 Hs.558851 NM_001031854 ENSG00000205126 ACCSL - 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like protein-coding chr8-6107 chr8 27720006 27720216 + 5.77 0.000 Intergenic Intergenic -18344 NR_037418 100500871 NR_037418 ENSG00000265075 MIR3622B - microRNA 3622b ncRNA chrX-5206 chrX 134743320 134743530 + 5.77 0.000 intron (NM_001316887, intron 1 of 3) L2a|LINE|L2 -9789 NM_001316888 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr12-4498 chr12 21249328 21249538 + 5.77 0.000 Intergenic Intergenic 85484 NM_021094 6579 Hs.46440 NM_005075 ENSG00000084453 SLCO1A2 OATP|OATP-A|OATP1A2|SLC21A3 solute carrier organic anion transporter family member 1A2 protein-coding chr10-7036 chr10 79572232 79572442 + 5.77 0.000 Intergenic L1PA6|LINE|L1 -11930 NM_001098668 729238 Hs.523084 NM_001098668 ENSG00000185303 SFTPA2 COLEC5|PSAP|PSP-A|PSPA|SFTP1|SFTPA2B|SP-2A|SP-A|SPA2|SPAII surfactant protein A2 protein-coding chr11-9621 chr11 66036240 66036450 + 5.77 0.000 Intergenic MIRb|SINE|MIR -9866 NM_053054 117144 Hs.189105 NM_053054 ENSG00000175294 CATSPER1 CATSPER|SPGF7 cation channel sperm associated 1 protein-coding chr12-6868 chr12 18873327 18873537 + 5.77 0.000 Intergenic Intergenic 135313 NM_033328 93661 Hs.131288 NM_033328 ENSG00000177938 CAPZA3 CAPPA3|Gsg3|HEL-S-86 capping actin protein of muscle Z-line subunit alpha 3 protein-coding chr14-2833 chr14 25817136 25817346 + 5.77 0.000 Intergenic Intergenic 736189 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr2-10795 chr2 45682275 45682485 + 5.77 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 30705 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr16-4999 chr16 24031773 24031983 + 5.77 0.000 intron (NM_002738, intron 3 of 16) intron (NM_002738, intron 3 of 16) -171238 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr1-7867 chr1 101175479 101175689 + 5.77 0.000 Intergenic Intergenic 60944 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr5-1491 chr5 113753599 113753809 + 5.77 0.000 Intergenic Intergenic 240010 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr3-10664 chr3 149936955 149937165 + 5.77 0.000 intron (NM_183383, intron 7 of 8) L1M1|LINE|L1 33835 NM_053024 5217 Hs.91747 NM_002628 ENSG00000070087 PFN2 D3S1319E|PFL profilin 2 protein-coding chr11-6809 chr11 92625586 92625796 + 5.77 0.000 intron (NM_001008781, intron 2 of 24) intron (NM_001008781, intron 2 of 24) 273595 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr10-8264 chr10 75777120 75777330 + 5.77 0.000 intron (NR_131178, intron 1 of 7) intron (NR_131178, intron 1 of 7) -5536 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr11-7992 chr11 11541004 11541214 + 5.77 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 80896 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr14-2048 chr14 64976690 64976900 + 5.77 0.000 intron (NM_001202559, intron 3 of 13) intron (NM_001202559, intron 3 of 13) -4459 NM_001330182 376267 Hs.512492 NM_198686 ENSG00000139998 RAB15 - RAB15, member RAS oncogene family protein-coding chr12-5410 chr12 121672440 121672650 + 5.77 0.000 promoter-TSS (NM_001363685) promoter-TSS (NM_001363685) 99 NM_001363685 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 - MORN repeat containing 3 protein-coding chr4-7981 chr4 113756473 113756683 + 5.77 0.000 intron (NM_001321592, intron 2 of 2) intron (NM_001321592, intron 2 of 2) 5160 NM_001321577 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chrX-5082 chrX 126127005 126127215 + 5.77 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 17348 NR_110409 101928495 Hs.545998 NR_110409 ENSG00000237208 LOC101928495 - uncharacterized LOC101928495 ncRNA chr11-5201 chr11 12506567 12506777 + 5.77 0.000 intron (NM_018222, intron 6 of 12) intron (NM_018222, intron 6 of 12) 129101 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr1-16460 chr1 228038680 228038890 + 5.77 0.000 intron (NM_033131, intron 2 of 3) intron (NM_033131, intron 2 of 3) 31787 NM_033131 89780 Hs.336930 NM_033131 ENSG00000154342 WNT3A - Wnt family member 3A protein-coding chr14-5268 chr14 100182093 100182303 + 5.77 0.000 Intergenic Intergenic -22553 NM_206918 123099 Hs.159643 NM_206918 ENSG00000168350 DEGS2 C14orf66|DES2|FADS8 delta 4-desaturase, sphingolipid 2 protein-coding chr2-10631 chr2 12716827 12717037 + 5.77 0.000 promoter-TSS (NR_027303) promoter-TSS (NR_027303) -4 NR_027303 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr9-5317 chr9 86783941 86784151 + 5.77 0.000 Intergenic Intergenic 163460 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr2-11654 chr2 6825019 6825229 + 5.77 0.000 Intergenic MIRb|SINE|MIR 15340 NR_126359 104326052 Hs.7155 NR_126359 NRIR lncRNA-CMPK2 negative regulator of interferon response ncRNA chr11-10315 chr11 108655085 108655295 + 5.77 0.000 Intergenic Intergenic -9879 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr12-5771 chr12 4330729 4330939 + 5.77 0.000 intron (NM_020375, intron 1 of 5) intron (NM_020375, intron 1 of 5) 9621 NM_020375 57103 Hs.504545 NM_020375 ENSG00000078237 TIGAR C12orf5|FR2BP TP53 induced glycolysis regulatory phosphatase protein-coding chr16-6406 chr16 55144258 55144468 + 5.77 0.000 Intergenic Intergenic -180196 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr4-6569 chr4 186545341 186545551 + 5.77 0.000 intron (NM_005958, intron 1 of 1) L2b|LINE|L2 10121 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr9-4095 chr9 129435324 129435534 + 5.77 0.000 Intergenic MER53|DNA|hAT -53231 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr9-3112 chr9 71719741 71719951 + 5.77 0.000 intron (NM_013390, intron 12 of 23) (A)n|Simple_repeat|Simple_repeat 48667 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr12-6345 chr12 56936011 56936221 + 5.77 0.000 Intergenic Intergenic -1708 NM_148897 121214 Hs.380178 NM_148897 ENSG00000170426 SDR9C7 ARCI13|RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C member 7 protein-coding chr8-4984 chr8 136110517 136110727 + 5.77 0.000 Intergenic AluY|SINE|Alu -420176 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr10-6460 chr10 31867651 31867861 + 5.77 0.000 intron (NM_001270696, intron 3 of 17) L1ME4c|LINE|L1 41170 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr12-7784 chr12 96660604 96660814 + 5.77 0.000 intron (NM_001306084, intron 38 of 67) MER21B|LTR|ERVL 171132 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr6-8473 chr6 156107864 156108074 + 5.77 0.000 Intergenic Intergenic 161172 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chrX-4919 chrX 109559130 109559340 + 5.77 0.000 Intergenic L2a|LINE|L2 22030 NM_001242618 55916 Hs.25010 NM_018698 ENSG00000101888 NXT2 P15-2 nuclear transport factor 2 like export factor 2 protein-coding chr22-3301 chr22 50574074 50574284 + 5.77 0.000 intron (NR_027928, intron 19 of 29) L2b|LINE|L2 3838 NM_001145137 1375 Hs.439777 NM_004377 ENSG00000205560 CPT1B CPT1-M|CPT1M|CPTI|CPTI-M|M-CPT1|MCCPT1|MCPT1 carnitine palmitoyltransferase 1B protein-coding chrX-3215 chrX 52364874 52365084 + 5.77 0.000 Intergenic AluSz|SINE|Alu -4042 NM_130777 9502 Hs.409726 NM_130777 ENSG00000155622 XAGE2 CT12.2|GAGED3|XAGE-2|XAGE2B X antigen family member 2 protein-coding chr18-2041 chr18 46355560 46355770 + 5.77 0.000 intron (NM_001256758, intron 1 of 5) intron (NM_001256758, intron 1 of 5) 21441 NR_046357 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr16-6100 chr16 12758865 12759075 + 5.77 0.000 intron (NM_018340, intron 2 of 3) AluJo|SINE|Alu 38649 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr2-9986 chr2 13153534 13153744 + 5.77 0.000 Intergenic Intergenic -146626 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr12-6836 chr12 13757415 13757625 + 5.77 0.000 intron (NM_000834, intron 2 of 12) intron (NM_000834, intron 2 of 12) 222836 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr7-8919 chr7 94907570 94907780 + 5.77 0.000 promoter-TSS (NM_001166160) promoter-TSS (NM_001166160) 38 NM_017650 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr5-6602 chr5 34395942 34396152 + 5.77 0.000 Intergenic Intergenic -151323 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr3-10036 chr3 103692949 103693159 + 5.77 0.000 Intergenic L1PA7|LINE|L1 -168938 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr1-15868 chr1 182255710 182255920 + 5.77 0.000 intron (NR_104175, intron 2 of 2) ERV3-16A3_I-int|LTR|ERVL 58246 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr12-8056 chr12 115839253 115839463 + 5.77 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 309296 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr2-9348 chr2 227008319 227008529 + 5.77 0.000 intron (NM_000092, intron 46 of 47) intron (NM_000092, intron 46 of 47) 156135 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr6-8405 chr6 150643245 150643455 + 5.77 0.000 intron (NM_001329804, intron 2 of 17) intron (NM_001329804, intron 2 of 17) 10386 NR_138140 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chrX-1647 chrX 133664814 133665024 + 5.77 0.000 intron (NM_001164619, intron 4 of 6) AluJb|SINE|Alu -232524 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr6-4512 chr6 37743515 37743725 + 5.77 0.000 Intergenic Intergenic -45737 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr7-6594 chr7 89485897 89486107 + 5.77 0.000 Intergenic L1M3f|LINE|L1 -633398 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr19-5384 chr19 10516998 10517208 + 5.77 0.000 intron (NM_001166215, intron 1 of 1) intron (NM_001166215, intron 1 of 1) 344 NM_030760 53637 Hs.501561 NM_030760 ENSG00000180739 S1PR5 EDG8|Edg-8|S1P5|SPPR-1|SPPR-2 sphingosine-1-phosphate receptor 5 protein-coding chr5-6635 chr5 43227616 43227826 + 5.77 0.000 intron (NR_072980, intron 1 of 3) (ATTTATT)n|Simple_repeat|Simple_repeat 34869 NR_072980 167359 Hs.25845 NM_153361 ENSG00000177453 NIM1K NIM1 NIM1 serine/threonine protein kinase protein-coding chr7-7479 chr7 98041925 98042135 + 5.77 0.000 Intergenic L2a|LINE|L2 -51926 NM_006188 4951 Hs.510456 NM_006188 ENSG00000135175 OCM2 OCM|OM oncomodulin 2 protein-coding chr11-4368 chr11 74682425 74682635 + 5.77 0.000 Intergenic Intergenic 28837 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr10-4083 chr10 52308287 52308497 + 5.77 0.000 intron (NR_038277, intron 3 of 5) intron (NR_038277, intron 3 of 5) 5736 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr3-8516 chr3 135217217 135217427 + 5.77 0.000 intron (NM_004441, intron 12 of 15) intron (NM_004441, intron 12 of 15) 422062 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr11-9459 chr11 61645758 61645968 + 5.77 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 30827 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr11-10341 chr11 110299097 110299307 + 5.77 0.000 Intergenic MER41B|LTR|ERV1 -2490 NM_001260494 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr1-14340 chr1 40571936 40572146 + 5.77 0.000 Intergenic LTR5_Hs|LTR|ERVK 40404 NM_152373 127396 Hs.524767 NM_152373 ENSG00000117010 ZNF684 - zinc finger protein 684 protein-coding chr15-2806 chr15 37980046 37980256 + 5.77 0.000 intron (NM_001370737, intron 12 of 13) L1PA15|LINE|L1 45509 NM_001370736 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr1-8638 chr1 202626538 202626748 + 5.77 0.000 intron (NM_177402, intron 1 of 8) AluJo|SINE|Alu 16810 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr12-7307 chr12 53997168 53997378 + 5.77 0.000 promoter-TSS (NR_047505) promoter-TSS (NR_047505) -488 NR_047505 100874364 NR_047505 ENSG00000250133 HOXC-AS2 - HOXC cluster antisense RNA 2 ncRNA chr19-4481 chr19 5660506 5660716 + 5.77 0.000 intron (NM_001320572, intron 14 of 20) FLAM_C|SINE|Alu 19627 NM_001365761 125988 Hs.356626 NM_205767 ENSG00000174917 MICOS13 C19orf70|MIC13|P117|QIL1 mitochondrial contact site and cristae organizing system subunit 13 protein-coding chr3-8081 chr3 12022052 12022262 + 5.77 0.000 intron (NM_133625, intron 1 of 12) L2c|LINE|L2 17766 NM_133625 6854 Hs.445503 NM_003178 ENSG00000157152 SYN2 SYNII synapsin II protein-coding chr21-1793 chr21 38438473 38438683 + 5.77 0.000 intron (NM_001243429, intron 2 of 8) intron (NM_001243429, intron 2 of 8) 59899 NM_182918 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr12-4352 chr12 3029256 3029466 + 5.77 0.000 intron (NM_201443, intron 8 of 10) AluY|SINE|Alu -47994 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr11-10645 chr11 126414719 126414929 + 5.77 0.000 TTS (NM_001348398) TTS (NM_001348398) 8737 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr8-3277 chr8 19953948 19954158 + 5.77 0.000 intron (NM_000237, intron 4 of 9) intron (NM_000237, intron 4 of 9) 14800 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr6-6606 chr6 147468048 147468258 + 5.77 0.000 Intergenic Intergenic -40537 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr14-2284 chr14 54203499 54203709 + 5.77 0.000 Intergenic SVA_D|Retroposon|SVA -193264 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr5-5444 chr5 138246650 138246860 + 5.77 0.000 Intergenic Intergenic 27866 NM_001496 2676 Hs.58042 NM_001496 ENSG00000146013 GFRA3 GDNFR3 GDNF family receptor alpha 3 protein-coding chr5-5738 chr5 170095815 170096025 + 5.77 0.000 Intergenic Intergenic -9977 NM_012188 2299 Hs.87236 NM_012188 ENSG00000168269 FOXI1 FKH10|FKHL10|FREAC-6|FREAC6|HFH-3|HFH3 forkhead box I1 protein-coding chr17-8343 chr17 73570968 73571178 + 5.77 0.000 intron (NM_001144952, intron 1 of 44) AluSx|SINE|Alu 57390 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr3-9819 chr3 74420365 74420575 + 5.77 0.000 intron (NM_020872, intron 4 of 21) LTR84a|LTR|ERVL 100670 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr3-9187 chr3 35393887 35394097 + 5.77 0.000 promoter-TSS (NR_110817) promoter-TSS (NR_110817) 31 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr14-4473 chr14 35213927 35214137 + 5.77 0.000 intron (NM_014672, intron 5 of 7) intron (NM_014672, intron 5 of 7) -64526 NM_001282234 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr3-10495 chr3 135774533 135774743 + 5.77 0.000 Intergenic Intergenic -191090 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr2-9587 chr2 241090206 241090416 + 5.77 0.000 intron (NR_138464, intron 3 of 4) Tigger3b|DNA|TcMar-Tigger 11976 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr5-3929 chr5 176858148 176858358 + 5.77 0.000 intron (NM_133369, intron 1 of 14) L2b|LINE|L2 41093 NM_002115 3101 Hs.411695 NM_002115 ENSG00000160883 HK3 HKIII|HXK3 hexokinase 3 protein-coding chr14-3655 chr14 81971168 81971378 + 5.77 0.000 Intergenic Intergenic -228135 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA chrX-4474 chrX 62993656 62993866 + 5.77 0.000 Intergenic L1M1|LINE|L1 357571 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr10-7664 chr10 26984080 26984290 + 5.77 0.000 Intergenic PRIMA4-int|LTR|ERV1 -42184 NR_026795 387644 Hs.529965 NR_026795 ENSG00000283709 FAM238C C10orf51|LINC00202|LINC00202-1|NCRNA00202|bB27G4.1 family with sequence similarity 238 member C ncRNA chr6-5601 chr6 39026465 39026675 + 5.77 0.000 exon (NM_001206927, exon 92 of 93) exon (NM_001206927, exon 92 of 93) -22211 NR_136563 2740 Hs.351883 NM_002062 ENSG00000112164 GLP1R GLP-1|GLP-1-R|GLP-1R glucagon like peptide 1 receptor protein-coding chr13-3222 chr13 26769645 26769855 + 5.77 0.000 Intergenic Intergenic -8964 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr1-12034 chr1 110407996 110408206 + 5.77 0.000 promoter-TSS (NM_006402) promoter-TSS (NM_006402) -177 NM_006402 10542 Hs.439815 NM_006402 ENSG00000134248 LAMTOR5 HBXIP|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding chr13-2957 chr13 46595371 46595581 + 5.77 0.000 intron (NM_001164213, intron 1 of 18) intron (NM_001164213, intron 1 of 18) 42306 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr17-4999 chr17 81850871 81851081 + 5.77 0.000 intron (NM_000918, intron 4 of 10) AluY|SINE|Alu 9559 NM_000918 5034 Hs.464336 NM_000918 ENSG00000185624 P4HB CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB prolyl 4-hydroxylase subunit beta protein-coding chr2-8773 chr2 165162691 165162901 + 5.77 0.000 exon (NM_001081676, exon 8 of 28) exon (NM_001081676, exon 8 of 28) 41254 NM_006922 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr11-8825 chr11 12030027 12030237 + 5.77 0.000 promoter-TSS (NR_135109) promoter-TSS (NR_135109) -743 NR_135109 105376554 Hs.523483 NR_135109 ENSG00000254486 LINC02547 - long intergenic non-protein coding RNA 2547 ncRNA chr3-5514 chr3 196098538 196098748 + 5.77 0.000 Intergenic AluJo|SINE|Alu -16553 NM_001313965 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr13-3702 chr13 37492230 37492440 + 5.77 0.000 Intergenic Intergenic -7551 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chrX-1561 chrX 50893444 50893654 + 5.77 0.000 Intergenic L1MA4|LINE|L1 -17186 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr8-4300 chr8 97459560 97459770 + 5.77 0.000 Intergenic LTR88a|LTR|Gypsy? -13168 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr14-4559 chr14 45536645 45536855 + 5.77 0.000 Intergenic L1PA10|LINE|L1 178852 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr9-8391 chr9 118856330 118856540 + 5.77 0.000 Intergenic L1PA8|LINE|L1 176764 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr4-7465 chr4 70341625 70341835 + 5.77 0.000 Intergenic L2|LINE|L2 6749 NM_033122 85438 Hs.120316 NM_033122 ENSG00000145309 CABS1 C4orf35|CLPH|NYD-SP26 calcium binding protein, spermatid associated 1 protein-coding chr16-5711 chr16 81831599 81831809 + 5.77 0.000 intron (NM_002661, intron 2 of 32) intron (NM_002661, intron 2 of 32) 52413 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr18-3566 chr18 78790173 78790383 + 5.77 0.000 Intergenic Intergenic -189997 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr14-5133 chr14 90341869 90342079 + 5.77 0.000 Intergenic MER21C|LTR|ERVL -10033 NM_017970 55051 Hs.528131 NM_017970 ENSG00000119720 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding chr6-3889 chr6 62497905 62498115 + 5.77 0.000 Intergenic L1PA7|LINE|L1 -211783 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr2-13278 chr2 127926846 127927056 + 5.77 0.000 Intergenic LTR54|LTR|ERV1 -41011 NM_001199140 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr1-16431 chr1 226496882 226497092 + 5.77 0.000 Intergenic Intergenic -51777 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr10-6906 chr10 46069374 46069584 + 5.77 0.000 Intergenic AluY|SINE|Alu -23210 NM_002443 4477 Hs.255462 NM_002443 ENSG00000263639 MSMB HPC13|IGBF|MSP|MSPB|PN44|PRPS|PSP|PSP-94|PSP57|PSP94 microseminoprotein beta protein-coding chr14-2280 chr14 50342825 50343035 + 5.77 0.000 intron (NM_001282236, intron 4 of 8) intron (NM_001282236, intron 4 of 8) 30606 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr3-10633 chr3 147219829 147220039 + 5.77 0.000 Intergenic Intergenic 172496 NR_033119 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chr3-7515 chr3 171936363 171936573 + 5.77 0.000 Intergenic Intergenic -35728 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA chr6-8431 chr6 152173241 152173451 + 5.77 0.000 intron (NM_182961, intron 130 of 145) intron (NM_182961, intron 130 of 145) -5059 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr17-2494 chr17 79810163 79810373 + 5.77 0.000 Intergenic CpG -13184 NR_146504 105371919 NR_146504 ENSG00000262772 LINC01977 - long intergenic non-protein coding RNA 1977 ncRNA chr6-6166 chr6 4521454 4521664 + 5.77 0.000 Intergenic L2|LINE|L2 32761 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr3-11236 chr3 196093809 196094019 + 5.77 0.000 Intergenic Intergenic -11824 NM_001313965 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr20-3749 chr20 19153962 19154172 + 5.77 0.000 Intergenic LTR33A|LTR|ERVL -58575 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr18-1278 chr18 59273416 59273626 + 5.77 0.000 promoter-TSS (NM_013435) promoter-TSS (NM_013435) -67 NM_013435 30062 Hs.278957 NM_013435 ENSG00000134438 RAX MCOP3|RX retina and anterior neural fold homeobox protein-coding chr10-6385 chr10 1673811 1674021 + 5.77 0.000 intron (NM_018702, intron 1 of 9) MIR|SINE|MIR 63609 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr2-14246 chr2 211936939 211937149 + 5.77 0.000 intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 489316 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr2-8549 chr2 133579429 133579639 + 5.77 0.000 Intergenic Intergenic -11071 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr2-7020 chr2 150134327 150134537 + 5.77 0.000 Intergenic Intergenic 122575 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr17-6248 chr17 28278576 28278786 + 5.77 0.000 intron (NR_028334, intron 2 of 2) L1ME3G|LINE|L1 28701 NR_028334 284085 Hs.371796 NM_173624 ENSG00000265480 KRT18P55 - keratin 18 pseudogene 55 pseudo chr22-1596 chr22 18978384 18978594 + 5.77 0.000 intron (NR_045121, intron 1 of 2) MIRb|SINE|MIR 7991 NR_002733 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr1-12905 chr1 113396617 113396827 + 5.77 0.000 intron (NM_001142782, intron 1 of 20) L2c|LINE|L2 6207 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr3-8111 chr3 18393493 18393703 + 5.77 0.000 intron (NM_001131010, intron 7 of 10) intron (NM_001131010, intron 7 of 10) 31741 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr12-6739 chr12 5919612 5919822 + 5.77 0.000 intron (NM_001278596, intron 3 of 25) AluY|SINE|Alu 25542 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr6-3260 chr6 149857137 149857347 + 5.77 0.000 intron (NM_032832, intron 1 of 6) LTR8|LTR|ERV1 -6256 NR_045126 100652739 Hs.642734 NR_045126 ENSG00000223701 RAET1E-AS1 RAET1G-AS1 RAET1E antisense RNA 1 ncRNA chr7-7544 chr7 113227372 113227582 + 5.77 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -108895 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding chr15-3879 chr15 93283084 93283294 + 5.77 0.000 Intergenic Intergenic 77123 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr22-3895 chr22 35584921 35585131 + 5.77 0.000 Intergenic AluSx1|SINE|Alu 32303 NM_005368 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr9-6883 chr9 87063636 87063846 + 5.77 0.000 Intergenic Tigger9a|DNA|TcMar-Tigger 21484 NR_036691 494127 Hs.626316 NR_036691 LOC494127 - NFYC pseudogene pseudo chr9-8361 chr9 117386116 117386326 + 5.77 0.000 intron (NM_014010, intron 1 of 21) intron (NM_014010, intron 1 of 21) 28836 NM_001365068 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr15-4041 chr15 64031212 64031422 + 5.77 0.000 intron (NM_014326, intron 2 of 11) AluJb|SINE|Alu 15168 NM_001363730 23604 Hs.237886 NM_014326 ENSG00000035664 DAPK2 DRP-1|DRP1 death associated protein kinase 2 protein-coding chr11-8306 chr11 74451224 74451434 + 5.77 0.000 Intergenic AluSq2|SINE|Alu 16226 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 BRGDA6|HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr17-5430 chr17 35664929 35665139 + 5.77 0.000 intron (NM_001282, intron 14 of 20) intron (NM_001282, intron 14 of 20) -66605 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr2-5792 chr2 228866942 228867152 + 5.77 0.000 Intergenic Intergenic -255652 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chrX-4880 chrX 106502387 106502597 + 5.77 0.000 Intergenic Intergenic -109438 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr14-4624 chr14 53413263 53413473 + 5.77 0.000 Intergenic Intergenic 260014 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr17-7987 chr17 48725112 48725322 + 5.77 0.000 promoter-TSS (NR_036150) promoter-TSS (NR_036150) -742 NR_036150 100422978 NR_036150 ENSG00000263602 MIR3185 - microRNA 3185 ncRNA chrX-3138 chrX 15518116 15518326 + 5.77 0.000 intron (NM_203281, intron 6 of 18) intron (NM_203281, intron 6 of 18) 10913 NM_001721 660 Hs.495731 NM_001721 ENSG00000102010 BMX ETK|PSCTK2|PSCTK3 BMX non-receptor tyrosine kinase protein-coding chrX-4199 chrX 35789138 35789348 + 5.77 0.000 Intergenic MER50|LTR|ERV1 -9099 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr16-6480 chr16 58214415 58214625 + 5.77 0.000 Intergenic AluJr|SINE|Alu -16414 NM_001896 1459 Hs.82201 NM_001896 ENSG00000070770 CSNK2A2 CK2A2|CK2alpha'|CSNK2A1 casein kinase 2 alpha 2 protein-coding chr21-1614 chr21 19227170 19227380 + 5.77 0.000 Intergenic THE1D|LTR|ERVL-MaLR -467463 NR_109925 101927797 Hs.551743 NR_109925 MIR548XHG - MIR548X host gene ncRNA chr19-4059 chr19 8497696 8497906 + 5.77 0.000 exon (NM_032152, exon 4 of 10) exon (NM_032152, exon 4 of 10) 4839 NM_032152 84106 Hs.465812 NM_032152 ENSG00000133246 PRAM1 PML-RAR|PRAM-1 PML-RARA regulated adaptor molecule 1 protein-coding chr15-5105 chr15 89169155 89169365 + 5.77 0.000 intron (NM_007011, intron 9 of 14) MIRc|SINE|MIR 52319 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chr1-14319 chr1 39639691 39639901 + 5.77 0.000 promoter-TSS (NM_014571) promoter-TSS (NM_014571) -153 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr15-4604 chr15 60741644 60741854 + 5.77 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 60180 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr1-11782 chr1 22864706 22864916 + 5.77 0.000 intron (NM_004442, intron 4 of 15) intron (NM_004442, intron 4 of 15) -1585 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr4-3042 chr4 138056766 138056976 + 5.77 0.000 intron (NR_037866, intron 7 of 10) intron (NR_037866, intron 7 of 10) -32143 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr15-4101 chr15 76165255 76165465 + 5.77 0.000 intron (NM_152335, intron 5 of 10) intron (NM_152335, intron 5 of 10) 16126 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr2-12412 chr2 55917941 55918151 + 5.77 0.000 exon (NM_001039348, exon 5 of 12) exon (NM_001039348, exon 5 of 12) 5736 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chrX-956 chrX 93294805 93295015 + 5.77 0.000 Intergenic L1M1|LINE|L1 378668 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr11-4413 chr11 85874583 85874793 + 5.77 0.000 intron (NM_001286159, intron 3 of 10) L2c|LINE|L2 19587 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr12-4928 chr12 68558370 68558580 + 5.77 0.000 Intergenic MIRb|SINE|MIR -52424 NM_001251918 5908 Hs.369920 NM_015646 ENSG00000127314 RAP1B K-REV|RAL1B RAP1B, member of RAS oncogene family protein-coding chr16-4384 chr16 49744451 49744661 + 5.77 0.000 intron (NM_001271620, intron 2 of 7) intron (NM_001271620, intron 2 of 7) 78182 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chrX-4522 chrX 66911260 66911470 + 5.77 0.000 Intergenic MIRb|SINE|MIR -272067 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr19-5193 chr19 16483555 16483765 + 5.77 0.000 intron (NM_145046, intron 5 of 8) AluSq|SINE|Alu -11648 NM_001258376 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr1-16149 chr1 205566136 205566346 + 5.77 0.000 intron (NR_152721, intron 1 of 3) intron (NR_152721, intron 1 of 3) -2773 NM_181644 148808 Hs.567714 NM_181644 ENSG00000174514 MFSD4A MFSD4|UNQ3064 major facilitator superfamily domain containing 4A protein-coding chr15-4586 chr15 59584774 59584984 + 5.77 0.000 Intergenic AluJr|SINE|Alu -26904 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr3-9033 chr3 22415593 22415803 + 5.77 0.000 Intergenic Intergenic 458559 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr2-13776 chr2 171954914 171955124 + 5.77 0.000 intron (NR_027862, intron 3 of 9) MLT1D|LTR|ERVL-MaLR 32558 NM_003642 8520 Hs.632532 NM_003642 ENSG00000128708 HAT1 KAT1 histone acetyltransferase 1 protein-coding chr3-7843 chr3 112752384 112752594 + 5.77 0.000 Intergenic AluSc|SINE|Alu -3170 NR_110017 101929694 Hs.385630 NR_110017 ENSG00000240893 LINC02042 - long intergenic non-protein coding RNA 2042 ncRNA chr11-8703 chr11 6026229 6026439 + 5.77 0.000 TTS (NM_001001917) TTS (NM_001001917) 1407 NM_001001917 120796 Hs.553543 NM_001001917 ENSG00000180934 OR56A1 OR11-75 olfactory receptor family 56 subfamily A member 1 protein-coding chr1-15223 chr1 111192435 111192645 + 5.77 0.000 intron (NM_001271833, intron 7 of 11) intron (NM_001271833, intron 7 of 11) 8106 NM_024901 79961 Hs.557850 NM_024901 ENSG00000162777 DENND2D - DENN domain containing 2D protein-coding chr2-11186 chr2 155479807 155480017 + 5.77 0.000 Intergenic L1PA5|LINE|L1 775019 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chrX-1372 chrX 152791705 152791915 + 5.77 0.000 Intergenic L1M1|LINE|L1 -22081 NM_175868 4105 Hs.441113 NM_005363 ENSG00000197172 MAGEA6 CT1.6|MAGE-3b|MAGE3B|MAGE6 MAGE family member A6 protein-coding chr10-4524 chr10 92674872 92675082 + 5.77 0.000 Intergenic SVA_F|Retroposon|SVA -14978 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr12-4119 chr12 64967878 64968088 + 5.77 0.000 intron (NR_146276, intron 2 of 3) MLT1B|LTR|ERVL-MaLR 24308 NR_146276 109729131 Hs.577553 NR_146276 ENSG00000248995 LINC02231 - long intergenic non-protein coding RNA 2231 ncRNA chr2-12470 chr2 60823725 60823935 + 5.77 0.000 Intergenic Intergenic 57484 NR_033980 400957 Hs.170358 NR_033980 ENSG00000228414 LINC01185 - long intergenic non-protein coding RNA 1185 ncRNA chr11-8796 chr11 11038416 11038626 + 5.77 0.000 Intergenic Intergenic 180304 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr3-8165 chr3 35670373 35670583 + 5.77 0.000 intron (NM_016300, intron 1 of 19) intron (NM_016300, intron 1 of 19) -9146 NM_001267618 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr10-8945 chr10 117259581 117259791 + 5.77 0.000 intron (NM_003054, intron 10 of 15) HAL1|LINE|L1 18572 NM_003054 6571 Hs.596992 NM_003054 ENSG00000165646 SLC18A2 PKDYS2|SVAT|SVMT|VAT2|VMAT2 solute carrier family 18 member A2 protein-coding chr7-8666 chr7 72011257 72011467 + 5.77 0.000 intron (NM_001363460, intron 4 of 5) intron (NM_001363460, intron 4 of 5) 326029 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chrX-3744 chrX 123667428 123667638 + 5.77 0.000 intron (NM_001081550, intron 10 of 38) AluJb|SINE|Alu 65519 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr18-2814 chr18 5352604 5352814 + 5.77 0.000 Intergenic Intergenic -55656 NM_001243704 7541 Hs.592340 NM_003409 ENSG00000198081 ZBTB14 ZF5|ZFP-161|ZFP-5|ZFP161|ZNF478 zinc finger and BTB domain containing 14 protein-coding chr16-5575 chr16 47068899 47069109 + 5.77 0.000 Intergenic L1M3|LINE|L1 74941 NM_001201477 81831 Hs.645802 NM_018092 ENSG00000171208 NETO2 BTCL2|NEOT2 neuropilin and tolloid like 2 protein-coding chrX-4412 chrX 53341314 53341524 + 5.77 0.000 Intergenic Intergenic -20069 NM_001111125 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr16-3149 chr16 75070229 75070439 + 5.77 0.000 intron (NM_032268, intron 1 of 4) L2b|LINE|L2 46438 NM_194436 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr2-12579 chr2 70215081 70215291 + 5.77 0.000 TTS (NM_001351516) TTS (NM_001351516) -24167 NM_001348761 54980 Hs.720049 NM_017880 ENSG00000115998 C2orf42 - chromosome 2 open reading frame 42 protein-coding chr12-6570 chr12 121438737 121438947 + 5.77 0.000 intron (NM_001005366, intron 21 of 22) intron (NM_001005366, intron 21 of 22) 5510 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr16-2186 chr16 70370271 70370481 + 5.77 0.000 non-coding (NR_135296, exon 8 of 10) non-coding (NR_135296, exon 8 of 10) 23473 NM_018332 55308 Hs.656037 NM_018332 ENSG00000168872 DDX19A DDX19-DDX19L|DDX19L DEAD-box helicase 19A protein-coding chr4-5664 chr4 15366903 15367113 + 5.77 0.000 intron (NM_001135170, intron 1 of 2) intron (NM_001135170, intron 1 of 2) -7543 NM_001135171 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr11-8049 chr11 24585141 24585351 + 5.77 0.000 intron (NM_001252008, intron 1 of 11) intron (NM_001252008, intron 1 of 11) 88193 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr14-5161 chr14 91342683 91342893 + 5.77 0.000 intron (NM_001080414, intron 5 of 29) intron (NM_001080414, intron 5 of 29) 75032 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr4-2844 chr4 53586198 53586408 + 5.77 0.000 intron (NM_001126328, intron 1 of 10) intron (NM_001126328, intron 1 of 10) 5183 NM_001126328 84708 Hs.518760 NM_032622 ENSG00000072201 LNX1 LNX|MPDZ|PDZRN2 ligand of numb-protein X 1 protein-coding chr3-8323 chr3 66021036 66021246 + 5.77 0.000 intron (NM_001365904, intron 1 of 24) MER3|DNA|hAT-Charlie 17777 NM_001365904 9223 Hs.476636 NM_004742 ENSG00000151276 MAGI1 AIP-3|AIP3|BAIAP1|BAP-1|BAP1|MAGI-1|MAGI-1b|Magi1d|TNRC19|WWP3 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding chr8-5807 chr8 483938 484148 + 5.77 0.000 Intergenic Intergenic 31709 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr2-12494 chr2 62727830 62728040 + 5.77 0.000 intron (NM_001142615, intron 2 of 22) LTR35|LTR|ERV1 21038 NM_001354217 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr8-4862 chr8 42757503 42757713 + 5.77 0.000 intron (NM_001199279, intron 2 of 4) AluY|SINE|Alu 11178 NM_004198 8973 Hs.103128 NM_004198 ENSG00000147434 CHRNA6 CHNRA6 cholinergic receptor nicotinic alpha 6 subunit protein-coding chr18-3434 chr18 64737472 64737682 + 5.77 0.000 Intergenic Intergenic -477522 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr9-6822 chr9 37047016 37047226 + 5.77 0.000 Intergenic Intergenic -12853 NR_104000 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr19-5379 chr19 10083551 10083761 + 5.77 0.000 Intergenic AluJb|SINE|Alu -2661 NM_001308277 55337 Hs.655613 NM_018381 ENSG00000130813 SHFL C19orf66|IRAV|RyDEN|SFL shiftless antiviral inhibitor of ribosomal frameshifting protein-coding chr1-12002 chr1 93209860 93210070 + 5.77 0.000 intron (NM_001306076, intron 9 of 28) AluJo|SINE|Alu 29249 NM_206886 343099 Hs.482873 NM_206886 ENSG00000122483 CCDC18 NY-SAR-41 coiled-coil domain containing 18 protein-coding chr4-6246 chr4 67868309 67868519 + 5.77 0.000 intron (NM_004262, intron 1 of 9) L1PB4|LINE|L1 15588 NM_004262 9407 Hs.132195 NM_004262 ENSG00000153802 TMPRSS11D HAT transmembrane serine protease 11D protein-coding chr12-5656 chr12 82789925 82790135 + 5.77 0.000 intron (NM_001320321, intron 1 of 10) AluJr|SINE|Alu 102875 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr5-6259 chr5 96259204 96259414 + 5.77 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 172850 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr17-6177 chr17 82686962 82687172 + 5.77 0.000 intron (NM_006822, intron 1 of 5) intron (NM_006822, intron 1 of 5) 11631 NM_006822 10966 Hs.484068 NM_006822 ENSG00000141542 RAB40B RAR|SEC4L RAB40B, member RAS oncogene family protein-coding chr11-10248 chr11 101325349 101325559 + 5.77 0.000 Intergenic Intergenic 194451 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr2-13019 chr2 107959711 107959921 + 5.77 0.000 Intergenic Intergenic -26708 NM_021815 60482 Hs.287758 NM_021815 ENSG00000115665 SLC5A7 CHT|CHT1|CMS20|HMN7A solute carrier family 5 member 7 protein-coding chr6-7173 chr6 37737609 37737819 + 5.77 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -39831 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr7-6958 chr7 99888561 99888771 + 5.77 0.000 Intergenic SVA_D|Retroposon|SVA -11633 NM_001005276 81392 Hs.647523 NM_001005276 ENSG00000244623 OR2AE1 OR2AE2 olfactory receptor family 2 subfamily AE member 1 protein-coding chr7-9005 chr7 100840373 100840583 + 5.77 0.000 intron (NR_146550, intron 1 of 1) Harlequin-int|LTR|ERV1 12136 NR_146550 105375430 Hs.638778 NR_146550 ENSG00000236305 SLC12A9-AS1 - SLC12A9 antisense RNA 1 ncRNA chr13-1619 chr13 50104507 50104717 + 5.77 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 20929 NR_152566 8847 Hs.547964 NR_002612 ENSG00000231607 DLEU2 ALT1|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 ncRNA chr4-8754 chr4 186520519 186520729 + 5.77 0.000 Intergenic L1PBa|LINE|L1 -19566 NR_033900 285441 Hs.481369 NR_033900 ENSG00000251165 F11-AS1 - F11 antisense RNA 1 ncRNA chr1-12011 chr1 97245801 97246011 + 5.77 0.000 intron (NM_000110, intron 18 of 22) (TTCACT)n|Simple_repeat|Simple_repeat 149983 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr13-4100 chr13 79007752 79007962 + 5.77 0.000 Intergenic Intergenic -167807 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr10-9068 chr10 124930084 124930294 + 5.77 0.000 Intergenic Intergenic -11934 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr10-8069 chr10 66675603 66675813 + 5.77 0.000 intron (NM_001127384, intron 9 of 17) Tigger19a|DNA|TcMar-Tigger -250328 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr12-5710 chr12 113459415 113459625 + 5.77 0.000 Intergenic (TGTATG)n|Simple_repeat|Simple_repeat 12351 NM_022363 64211 Hs.302029 NM_022363 ENSG00000089116 LHX5 - LIM homeobox 5 protein-coding chr3-3097 chr3 138434575 138434785 + 5.77 0.000 promoter-TSS (NM_001322831) promoter-TSS (NM_001322831) 64 NM_031913 83850 Hs.477711 NM_031913 ENSG00000158220 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin 3 protein-coding chr11-7781 chr11 91502234 91502444 + 5.77 0.000 Intergenic Intergenic -633137 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr18-3187 chr18 45112669 45112879 + 5.77 0.000 Intergenic L1MEg|LINE|L1 -55189 NM_001371319 chr6-3913 chr6 72048917 72049127 + 5.77 0.000 intron (NM_001350411, intron 2 of 3) intron (NM_001350411, intron 2 of 3) 162319 NM_001350412 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding KI270512.1-1 KI270512.1 21361 21571 + 5.77 0.000 NA NA NA NA chr17-6879 chr17 29836127 29836337 + 5.77 0.000 intron (NM_033389, intron 1 of 14) MIRb|SINE|MIR -74800 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr11-10063 chr11 84473047 84473257 + 5.77 0.000 intron (NM_001142699, intron 7 of 27) MIR3|SINE|MIR -155813 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr11-8467 chr11 117025896 117026106 + 5.77 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 72427 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr16-4366 chr16 47408991 47409201 + 5.77 0.000 intron (NM_030790, intron 6 of 17) Charlie1|DNA|hAT-Charlie 51967 NM_030790 81533 Hs.42217 NM_030790 ENSG00000129636 ITFG1 2310047C21Rik|CDA08|LNKN-1|TIP integrin alpha FG-GAP repeat containing 1 protein-coding chr9-6515 chr9 105998955 105999165 + 5.77 0.000 Intergenic Intergenic 304519 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr13-1794 chr13 24538574 24538784 + 5.77 0.000 TTS (NR_158455) TTS (NR_158455) 3041 NR_158455 105370295 NR_158453 LOC105370295 - uncharacterized LOC105370295 ncRNA chr16-3912 chr16 82612332 82612542 + 5.77 0.000 Intergenic MIRb|SINE|MIR -14532 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr3-8628 chr3 170853994 170854204 + 5.77 0.000 Intergenic Intergenic 16096 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr2-12205 chr2 42461628 42461838 + 5.77 0.000 intron (NM_172344, intron 1 of 1) intron (NM_172344, intron 1 of 1) 32249 NM_133329 170850 Hs.352633 NM_133329 ENSG00000171126 KCNG3 KV10.1|KV6.3 potassium voltage-gated channel modifier subfamily G member 3 protein-coding chr12-8081 chr12 117294192 117294402 + 5.77 0.000 intron (NM_000620, intron 3 of 28) intron (NM_000620, intron 3 of 28) 10755 NM_001204213 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr4-8365 chr4 148288692 148288902 + 5.77 0.000 intron (NM_000901, intron 2 of 8) intron (NM_000901, intron 2 of 8) 153617 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr11-5728 chr11 2355137 2355347 + 5.77 0.000 intron (NR_108080, intron 1 of 2) ERVL-B4-int|LTR|ERVL -20935 NM_001297649 975 Hs.54457 NM_004356 ENSG00000110651 CD81 CVID6|S5.7|TAPA1|TSPAN28 CD81 molecule protein-coding chr22-2035 chr22 40975352 40975562 + 5.77 0.000 Intergenic Intergenic 24079 NM_014248 9978 Hs.474949 NM_014248 ENSG00000100387 RBX1 BA554C12.1|RNF75|ROC1 ring-box 1 protein-coding chr11-7678 chr11 66493283 66493493 + 5.77 0.000 intron (NM_130443, intron 11 of 17) MIRc|SINE|MIR 12954 NM_001256670 10072 Hs.502914 NM_005700 ENSG00000254986 DPP3 DPPIII dipeptidyl peptidase 3 protein-coding chr17-7111 chr17 74247747 74247957 + 5.77 0.000 promoter-TSS (NM_052869) promoter-TSS (NM_052869) -514 NM_052869 94015 Hs.27935 NM_032646 ENSG00000141540 TTYH2 C17orf29 tweety family member 2 protein-coding chr8-4683 chr8 139215398 139215608 + 5.77 0.000 Intergenic Intergenic -301462 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr17-4389 chr17 28608946 28609156 + 5.77 0.000 3' UTR (NM_001174103, exon 12 of 12) 3' UTR (NM_001174103, exon 12 of 12) 5134 NM_001174103 124923 Hs.729077 NM_144610 ENSG00000167524 RSKR SGK494 ribosomal protein S6 kinase related protein-coding chr1-9826 chr1 60690043 60690253 + 5.77 0.000 intron (NR_110628, intron 4 of 5) L1PA11|LINE|L1 -67463 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr19-5366 chr19 7503949 7504159 + 5.77 0.000 intron (NM_198534, intron 2 of 8) intron (NM_198534, intron 2 of 8) 6506 NM_198534 374877 Hs.631862 NM_198534 ENSG00000198723 TEX45 C19orf45 testis expressed 45 protein-coding chr4-6431 chr4 133288232 133288442 + 5.77 0.000 Intergenic Intergenic 139043 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr19-3128 chr19 17282166 17282376 + 5.77 0.000 intron (NM_001278443, intron 2 of 8) CpG-13976 370 NR_103530 126549 Hs.721610 NM_152363 ENSG00000160117 ANKLE1 ANKRD41|LEM3|LEMD6 ankyrin repeat and LEM domain containing 1 protein-coding chr5-6163 chr5 51017237 51017447 + 5.77 0.000 Intergenic L1MA2|LINE|L1 -47155 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chrX-1879 chrX 129321574 129321784 + 5.77 0.000 Intergenic L3|LINE|CR1 201811 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr11-8628 chr11 2494435 2494645 + 5.77 0.000 intron (NM_181798, intron 1 of 15) L1PA8|LINE|L1 33086 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr15-4975 chr15 79519169 79519379 + 5.77 0.000 Intergenic Intergenic 86758 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr6-3971 chr6 107617996 107618206 + 5.77 0.000 intron (NM_018013, intron 5 of 6) AluSx1|SINE|Alu 114049 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr7-4012 chr7 146793687 146793897 + 5.77 0.000 intron (NM_014141, intron 1 of 22) intron (NM_014141, intron 1 of 22) 19521 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr12-5830 chr12 34206707 34206917 + 5.77 0.000 Intergenic Intergenic 184316 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr4-3723 chr4 73653698 73653908 + 5.77 0.000 Intergenic Intergenic -33172 NM_001270392 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr16-4494 chr16 57500828 57501038 + 5.77 0.000 Intergenic Intergenic -14440 NM_001369618 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr3-3777 chr3 12693848 12694058 + 5.77 0.000 Intergenic Intergenic -29752 NM_002880 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr9-7700 chr9 72236547 72236757 + 5.77 0.000 intron (NM_001351573, intron 10 of 14) L2c|LINE|L2 -68784 NR_110953 100507540 Hs.54957 NR_110952 ENSG00000225434 LINC01504 - long intergenic non-protein coding RNA 1504 ncRNA chr4-8079 chr4 123087298 123087508 + 5.77 0.000 intron (NM_001345856, intron 13 of 15) L1MC1|LINE|L1 164325 NM_001317799 166378 Hs.709648 NM_145207 ENSG00000145375 SPATA5 AFG2|EHLMRS|SPAF spermatogenesis associated 5 protein-coding chr11-10729 chr11 131769734 131769944 + 5.77 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -106283 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr7-8426 chr7 46754009 46754219 + 5.77 0.000 Intergenic L3b|LINE|CR1 -56992 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr3-9979 chr3 98133130 98133340 + 5.77 0.000 exon (NM_001005338, exon 1 of 1) exon (NM_001005338, exon 1 of 1) 537 NM_001005338 26341 Hs.537383 NM_001005338 ENSG00000231192 OR5H1 HSHTPCRX14|HTPCRX14 olfactory receptor family 5 subfamily H member 1 protein-coding chr12-2750 chr12 43897126 43897336 + 5.77 0.000 intron (NM_001286213, intron 2 of 6) intron (NM_001286213, intron 2 of 6) 61150 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr6-8109 chr6 126684602 126684812 + 5.77 0.000 Intergenic L1PA16|LINE|L1 200076 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr20-2145 chr20 37000882 37001092 + 5.77 0.000 intron (NM_002895, intron 21 of 21) SVA_D|Retroposon|SVA -49144 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr21-1139 chr21 39099916 39100126 + 5.77 0.000 Intergenic Charlie3|DNA|hAT-Charlie 83430 NM_003720 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chr7-6653 chr7 131210365 131210575 + 5.77 0.000 intron (NM_001145354, intron 2 of 18) AluSx3|SINE|Alu 100376 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr17-7163 chr17 78998831 78999041 + 5.77 0.000 intron (NM_001159772, intron 1 of 5) intron (NM_001159772, intron 1 of 5) 10828 NM_138793 124583 Hs.8859 NM_138793 ENSG00000171302 CANT1 DBQD|DBQD1|EDM7|SCAN-1|SCAN1|SHAPY calcium activated nucleotidase 1 protein-coding chr17-4717 chr17 31928219 31928429 + 5.77 0.000 Intergenic AluYc|SINE|Alu -8683 NM_001321207 23512 Hs.462732 NM_015355 ENSG00000178691 SUZ12 CHET9|JJAZ1 SUZ12 polycomb repressive complex 2 subunit protein-coding chr7-7215 chr7 21158103 21158313 + 5.77 0.000 Intergenic Intergenic -269875 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr11-8417 chr11 102497092 102497302 + 5.77 0.000 intron (NR_135076, intron 2 of 2) L2c|LINE|L2 29942 NR_135076 102723838 Hs.738066 NR_135076 ENSG00000255482 LOC102723838 - uncharacterized LOC102723838 ncRNA chr2-14217 chr2 209591392 209591602 + 5.77 0.000 intron (NM_001039538, intron 3 of 14) L2a|LINE|L2 11818 NM_001363911 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr14-4530 chr14 40724627 40724837 + 5.77 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -229979 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA chr2-12425 chr2 57345649 57345859 + 5.77 0.000 Intergenic Intergenic -561897 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr4-8394 chr4 151304869 151305079 + 5.77 0.000 Intergenic (AAAAC)n|Simple_repeat|Simple_repeat 27801 NM_001353611 345062 Hs.651266 NM_183375 ENSG00000189099 PRSS48 ESSPL serine protease 48 protein-coding chr2-8935 chr2 185720966 185721176 + 5.77 0.000 intron (NR_110217, intron 2 of 2) Tigger3b|DNA|TcMar-Tigger 17648 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr13-1824 chr13 66267182 66267392 + 5.77 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 49037 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr19-5073 chr19 50952644 50952854 + 5.77 0.000 5' UTR (NM_001077491, exon 2 of 7) 5' UTR (NM_001077491, exon 2 of 7) 289 NM_001077492 25818 Hs.50915 NM_012427 ENSG00000167754 KLK5 KLK-L2|KLKL2|SCTE kallikrein related peptidase 5 protein-coding chr2-13968 chr2 188788783 188788993 + 5.77 0.000 intron (NR_161166, intron 1 of 1) A-rich|Low_complexity|Low_complexity 1235 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr10-7843 chr10 45502676 45502886 + 5.77 0.000 intron (NM_001282866, intron 2 of 7) L1MEf|LINE|L1 32590 NM_001282866 220972 Hs.499489 NM_145021 ENSG00000165406 MARCH8 CMIR|MARCH-VIII|MIR|RNF178|c-MIR membrane associated ring-CH-type finger 8 protein-coding chr10-7263 chr10 126749054 126749264 + 5.77 0.000 Intergenic Intergenic -78649 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr2-8288 chr2 102712821 102713031 + 5.77 0.000 Intergenic Intergenic 23962 NR_136173 84804 Hs.590898 NM_032718 ENSG00000135953 MFSD9 - major facilitator superfamily domain containing 9 protein-coding chr17-7983 chr17 48639207 48639417 + 5.77 0.000 Intergenic Intergenic -6753 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr10-6956 chr10 65273748 65273958 + 5.77 0.000 Intergenic MLT2A1|LTR|ERVL -297572 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr14-4771 chr14 63877346 63877556 + 5.77 0.000 intron (NM_015180, intron 1 of 114) intron (NM_015180, intron 1 of 114) 24447 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr11-8956 chr11 19632111 19632321 + 5.77 0.000 intron (NM_001111018, intron 1 of 37) MIRc|SINE|MIR 56906 NR_039706 100616118 NR_039706 ENSG00000265210 MIR4486 - microRNA 4486 ncRNA chr6-3539 chr6 41759140 41759350 + 5.77 0.000 Intergenic Intergenic -11844 NM_001166424 5225 Hs.1867 NM_002630 ENSG00000096088 PGC PEPC|PGII progastricsin protein-coding chr12-6157 chr12 6402369 6402579 + 5.77 0.000 Intergenic AluYh3|SINE|Alu 18312 NM_002342 4055 Hs.1116 NM_002342 ENSG00000111321 LTBR D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3 lymphotoxin beta receptor protein-coding chr3-8729 chr3 194438572 194438782 + 5.77 0.000 intron (NM_001367549, intron 17 of 33) AluJo|SINE|Alu 29562 NM_024524 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr14-4790 chr14 65156819 65157029 + 5.77 0.000 Intergenic Intergenic -54229 NR_073137 4149 Hs.285354 NM_002382 ENSG00000125952 MAX bHLHd4 MYC associated factor X protein-coding chr22-2951 chr22 48919283 48919493 + 5.77 0.000 Intergenic Intergenic 52618 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr10-7568 chr10 17392959 17393169 + 5.77 0.000 intron (NM_001004470, intron 2 of 7) MLT2B1|LTR|ERVL 6128 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr10-8459 chr10 87142929 87143139 + 5.77 0.000 intron (NM_001330112, intron 2 of 9) AluJb|SINE|Alu 47828 NM_019054 54537 Hs.500419 NM_019054 ENSG00000122376 SHLD2 FAM35A|FAM35A1|RINN2|bA163M19.1 shieldin complex subunit 2 protein-coding chr2-11692 chr2 9141179 9141389 + 5.77 0.000 Intergenic Intergenic -65481 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr3-10565 chr3 141352753 141352963 + 5.77 0.000 intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) 28672 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr12-8112 chr12 119832894 119833104 + 5.77 0.000 intron (NM_007174, intron 6 of 46) intron (NM_007174, intron 6 of 46) 44321 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chrX-2736 chrX 126400276 126400486 + 5.77 0.000 Intergenic Intergenic 152433 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr14-2030 chr14 61319960 61320170 + 5.77 0.000 Intergenic AluJr4|SINE|Alu -1378 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr2-12868 chr2 97036941 97037151 + 5.77 0.000 Intergenic L2a|LINE|L2 -50466 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr5-6129 chr5 32255299 32255509 + 5.77 0.000 intron (NM_001294344, intron 8 of 13) intron (NM_001294344, intron 8 of 13) 57535 NM_001294343 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr20-2322 chr20 9336034 9336244 + 5.77 0.000 intron (NM_000933, intron 1 of 35) intron (NM_000933, intron 1 of 35) 28339 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr3-4489 chr3 54562018 54562228 + 5.77 0.000 intron (NM_018398, intron 5 of 37) THE1B|LTR|ERVL-MaLR 77734 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA chr7-8421 chr7 46405479 46405689 + 5.77 0.000 Intergenic Intergenic 291538 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr6-6152 chr6 1258776 1258986 + 5.77 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -53217 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr12-7082 chr12 43131299 43131509 + 5.77 0.000 Intergenic Intergenic -23911 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr10-7175 chr10 104651660 104651870 + 5.77 0.000 intron (NM_014978, intron 1 of 26) LTR16C|LTR|ERVL 10475 NM_014978 22986 Hs.671950 NM_014978 ENSG00000156395 SORCS3 SORCS sortilin related VPS10 domain containing receptor 3 protein-coding chr6-8130 chr6 129016044 129016254 + 5.77 0.000 intron (NM_000426, intron 1 of 64) intron (NM_000426, intron 1 of 64) 133008 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr1-13219 chr1 212357967 212358177 + 5.77 0.000 intron (NM_006243, intron 11 of 12) AluJo|SINE|Alu 5254 NR_004389 692157 Hs.707958 NR_004389 ENSG00000201544 SNORA16B U98b small nucleolar RNA, H/ACA box 16B snoRNA chr8-7071 chr8 116851036 116851246 + 5.77 0.000 intron (NM_006265, intron 11 of 13) intron (NM_006265, intron 11 of 13) -23283 NR_033886 644660 Hs.706174 NR_033886 ENSG00000253327 RAD21-AS1 C8orf81|NCRNA00255 RAD21 antisense RNA 1 ncRNA chr1-7703 chr1 24543479 24543689 + 5.77 0.000 intron (NR_109781, intron 2 of 2) AluSp|SINE|Alu 12440 NR_109781 100506985 Hs.607088 NR_109781 NCMAP-DT - NCMAP divergent transcript ncRNA chr1-13149 chr1 202081650 202081860 + 5.77 0.000 Intergenic Intergenic -41162 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr19-4898 chr19 41151884 41152094 + 5.77 0.000 Intergenic L1ME2z|LINE|L1 37557 NR_135528 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr22-1719 chr22 19758285 19758495 + 5.77 0.000 intron (NM_005992, intron 1 of 9) intron (NM_005992, intron 1 of 9) 1687 NM_080646 6899 Hs.173984 NM_005992 ENSG00000184058 TBX1 CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS T-box transcription factor 1 protein-coding chr8-7399 chr8 139769956 139770166 + 5.77 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -66938 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr8-4012 chr8 57543917 57544127 + 5.77 0.000 Intergenic Intergenic 200235 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr15-2705 chr15 88873984 88874194 + 5.77 0.000 intron (NM_001369268, intron 18 of 18) intron (NM_001369268, intron 18 of 18) 21455 NM_001307952 145864 Hs.447530 NM_178232 ENSG00000140511 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding chr10-8474 chr10 88727049 88727259 + 5.77 0.000 intron (NM_001080518, intron 2 of 8) intron (NM_001080518, intron 2 of 8) 2610 NM_001080518 643414 Hs.632092 NM_001080518 ENSG00000204021 LIPK LIPL2|bA186O14.2 lipase family member K protein-coding chr10-7288 chr10 130795793 130796003 + 5.77 0.000 Intergenic Intergenic 166770 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr7-8446 chr7 47589433 47589643 + 5.77 0.000 Intergenic AluSx|SINE|Alu -7427 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr4-7784 chr4 96340787 96340997 + 5.77 0.000 intron (NR_147149, intron 1 of 3) MER70A|LTR|ERVL 30189 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr15-4383 chr15 42604470 42604680 + 5.77 0.000 intron (NM_020759, intron 3 of 32) intron (NM_020759, intron 3 of 32) 28969 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr2-13750 chr2 170022822 170023032 + 5.77 0.000 intron (NM_172070, intron 30 of 38) intron (NM_172070, intron 30 of 38) -155220 NR_045684 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr12-6586 chr12 123512962 123513172 + 5.77 0.000 intron (NM_178314, intron 2 of 6) (TG)n|Simple_repeat|Simple_repeat 7159 NM_001319244 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr4-6095 chr4 10487627 10487837 + 5.77 0.000 3' UTR (NM_052964, exon 19 of 19) 3' UTR (NM_052964, exon 19 of 19) -30306 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr1-15117 chr1 101618579 101618789 + 5.77 0.000 Intergenic Intergenic 228396 NM_001288821 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr10-2955 chr10 42955525 42955735 + 5.77 0.000 Intergenic Intergenic 25877 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr4-6803 chr4 7706820 7707030 + 5.77 0.000 intron (NM_020777, intron 14 of 26) intron (NM_020777, intron 14 of 26) -47165 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr14-4719 chr14 59829957 59830167 + 5.77 0.000 intron (NM_021136, intron 1 of 8) intron (NM_021136, intron 1 of 8) 40714 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr3-8388 chr3 96976873 96977083 + 5.77 0.000 intron (NM_001080448, intron 2 of 17) MER115|DNA|hAT-Tip100 162384 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr9-7676 chr9 70228977 70229187 + 5.77 0.000 intron (NR_039990, intron 3 of 3) L2c|LINE|L2 29792 NR_039990 100507299 Hs.556816 NR_039990 SMC5-AS1 MAMDC2-AS2 SMC5 antisense RNA 1 (head to head) ncRNA chr14-3602 chr14 50343751 50343961 + 5.77 0.000 intron (NM_001282236, intron 4 of 8) intron (NM_001282236, intron 4 of 8) 31532 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr16-4290 chr16 27127667 27127877 + 5.77 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 60845 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr5-8439 chr5 128796687 128796897 + 5.77 0.000 Intergenic L2b|LINE|L2 -168335 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr8-3498 chr8 107353664 107353874 + 5.77 0.000 intron (NM_001199859, intron 1 of 8) intron (NM_001199859, intron 1 of 8) -17254 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr5-2046 chr5 109342454 109342664 + 5.77 0.000 intron (NM_014819, intron 9 of 9) SVA_F|Retroposon|SVA -16190 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr12-8083 chr12 117511435 117511645 + 5.77 0.000 intron (NM_173598, intron 14 of 19) MIRb|SINE|MIR -149738 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr3-10532 chr3 139138257 139138467 + 5.77 0.000 Intergenic Intergenic 34177 NR_026783 60467 Hs.512673 NM_021812 ENSG00000232416 BPESC1 NCRNA00187 blepharophimosis, epicanthus inversus and ptosis candidate 1 ncRNA chr1-11815 chr1 28820195 28820405 + 5.77 0.000 intron (NM_000911, intron 1 of 2) AluSz|SINE|Alu 8130 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chrX-4236 chrX 38806999 38807209 + 5.77 0.000 TTS (NM_021242) TTS (NM_021242) -3221 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr14-1683 chr14 79897450 79897660 + 5.77 0.000 Intergenic AluSz6|SINE|Alu -313864 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chr15-4937 chr15 78036234 78036444 + 5.77 0.000 intron (NM_144572, intron 3 of 12) intron (NM_144572, intron 3 of 12) 41313 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr20-1952 chr20 32630343 32630553 + 5.77 0.000 Intergenic Intergenic 42969 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr6-4720 chr6 62842675 62842885 + 5.77 0.000 Intergenic SATR1|Satellite|Satellite 477197 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr3-10671 chr3 150441777 150441987 + 5.77 0.000 intron (NR_130136, intron 3 of 4) intron (NR_130136, intron 3 of 4) 33584 NM_001303264 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr14-4320 chr14 22086363 22086573 + 5.77 0.000 Intergenic L3b|LINE|CR1 346285 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr16-6518 chr16 62440601 62440811 + 5.77 0.000 Intergenic L1MA5A|LINE|L1 -404268 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr6-2837 chr6 169724180 169724390 + 5.77 0.000 promoter-TSS (NM_133325) promoter-TSS (NM_133325) 215 NM_018288 55274 Hs.435933 NM_018288 ENSG00000130024 PHF10 BAF45A|XAP135 PHD finger protein 10 protein-coding chr1-8418 chr1 88061590 88061800 + 5.77 0.000 Intergenic Intergenic -622449 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr18-2332 chr18 12394799 12395009 + 5.77 0.000 Intergenic MIRb|SINE|MIR -13025 NM_001142405 10650 Hs.514718 NM_006553 ENSG00000141391 PRELID3A C18orf43|HFL-EDDG1|SLMO1 PRELI domain containing 3A protein-coding chr3-3630 chr3 108403295 108403505 + 5.77 0.000 intron (NM_014981, intron 34 of 41) intron (NM_014981, intron 34 of 41) 91615 NM_001282557 11148 Hs.225968 NM_007072 ENSG00000114455 HHLA2 B7-H5|B7-H7|B7H7|B7y HERV-H LTR-associating 2 protein-coding chr10-6816 chr10 16354245 16354455 + 5.77 0.000 Intergenic L2|LINE|L2 -82593 NM_001261836 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chrX-4540 chrX 68779983 68780193 + 5.77 0.000 Intergenic L1PA6|LINE|L1 -48909 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr2-13368 chr2 136658568 136658778 + 5.77 0.000 Intergenic Intergenic -106872 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chrX-2504 chrX 94152116 94152326 + 5.77 0.000 Intergenic L1PA6|LINE|L1 478015 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr14-3827 chr14 73582202 73582412 + 5.77 0.000 Intergenic LTR26|LTR|ERV1 -9399 NM_152331 122970 Hs.49433 NM_152331 ENSG00000177465 ACOT4 PTE-Ib|PTE1B|PTE2B acyl-CoA thioesterase 4 protein-coding chr3-10117 chr3 112973323 112973533 + 5.77 0.000 intron (NM_138806, intron 1 of 7) intron (NM_138806, intron 1 of 7) 1675 NM_138806 131450 Hs.309158 NM_138806 ENSG00000163606 CD200R1 CD200R|HCRTR2|MOX2R|OX2R CD200 receptor 1 protein-coding chr22-2532 chr22 25256349 25256559 + 5.77 0.000 Intergenic AluJr4|SINE|Alu 36815 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding chr12-5957 chr12 83181038 83181248 + 5.77 0.000 Intergenic AluSq2|SINE|Alu 493988 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr4-7986 chr4 114461229 114461439 + 5.77 0.000 Intergenic MSTC|LTR|ERVL-MaLR -137068 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr6-5482 chr6 162213912 162214122 + 5.77 0.000 intron (NM_004562, intron 3 of 11) intron (NM_004562, intron 3 of 11) -513115 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr12-6548 chr12 117073736 117073946 + 5.77 0.000 intron (NR_031766, intron 2 of 7) AluJo|SINE|Alu 25575 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr9-6381 chr9 28213110 28213320 + 5.77 0.000 intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) 506090 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr15-5138 chr15 90464319 90464529 + 5.77 0.000 intron (NM_003870, intron 15 of 37) intron (NM_003870, intron 15 of 37) -65499 NM_022769 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr2-5927 chr2 24324621 24324831 + 5.77 0.000 intron (NM_001348181, intron 2 of 40) AluJb|SINE|Alu 35810 NM_001348183 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr13-3535 chr13 23617256 23617466 + 5.77 0.000 intron (NM_001354985, intron 4 of 8) intron (NM_001354985, intron 4 of 8) 38001 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr5-5909 chr5 41617006 41617216 + 5.77 0.000 Intergenic Intergenic -106510 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding chr13-1874 chr13 27987242 27987452 + 5.77 0.000 intron (NM_001105577, intron 1 of 1) intron (NM_001105577, intron 1 of 1) 1290 NM_001105577 646625 Hs.705356 NM_001105577 ENSG00000183463 URAD PRHOXNB ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase protein-coding chr21-1265 chr21 16928985 16929195 + 5.77 0.000 Intergenic AluSz|SINE|Alu 338853 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA chr4-7401 chr4 63882459 63882669 + 5.77 0.000 Intergenic Intergenic 526886 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr1-11954 chr1 69069563 69069773 + 5.77 0.000 intron (NR_146608, intron 1 of 4) L1PA10|LINE|L1 13770 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr13-3311 chr13 53266214 53266424 + 5.77 0.000 Intergenic Intergenic -114419 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr11-10342 chr11 110365978 110366188 + 5.77 0.000 intron (NR_135100, intron 1 of 3) AluY|SINE|Alu 10969 NR_135100 105369486 Hs.611557 NR_135100 LINC02732 - long intergenic non-protein coding RNA 2732 ncRNA chrX-4622 chrX 76814873 76815083 + 5.77 0.000 intron (NR_110405, intron 1 of 2) L2|LINE|L2 104382 NR_029909 494333 NR_029909 ENSG00000283242 MIR384 MIRN384|hsa-mir-384 microRNA 384 ncRNA chr20-2619 chr20 41161532 41161742 + 5.77 0.000 intron (NM_182811, intron 4 of 31) MIR|SINE|MIR -7386 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr17-6328 chr17 63527946 63528156 + 5.77 0.000 intron (NM_030779, intron 2 of 13) intron (NM_030779, intron 2 of 13) 4693 NM_173092 81033 Hs.591177 NM_030779 ENSG00000173826 KCNH6 ERG-2|ERG2|HERG2|Kv11.2|hERG-2 potassium voltage-gated channel subfamily H member 6 protein-coding chr1-7405 chr1 36527336 36527546 + 5.77 0.000 Intergenic Intergenic -44127 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr12-5827 chr12 32875952 32876162 + 5.77 0.000 intron (NM_001005242, intron 3 of 12) intron (NM_001005242, intron 3 of 12) 20789 NM_004572 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr7-6051 chr7 111753863 111754073 + 5.77 0.000 intron (NM_001363540, intron 42 of 52) intron (NM_001363540, intron 42 of 52) -54537 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr7-6916 chr7 76307825 76308035 + 5.77 0.000 Intergenic AluSx|SINE|Alu 5257 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr5-7414 chr5 27523556 27523766 + 5.77 0.000 Intergenic LTR2752|LTR|ERV1 51369 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr19-5223 chr19 35899021 35899231 + 5.77 0.000 intron (NM_032721, intron 1 of 11) intron (NM_032721, intron 1 of 11) 611 NM_001321831 84807 Hs.466531 NM_032721 ENSG00000167604 NFKBID IkBNS|IkappaBNS|TA-NFKBH NFKB inhibitor delta protein-coding chr14-4428 chr14 32350292 32350502 + 5.77 0.000 intron (NM_004274, intron 1 of 13) L1MC3|LINE|L1 21099 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr3-7484 chr3 143147090 143147300 + 5.77 0.000 Intergenic Intergenic 27424 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr16-5228 chr16 29267218 29267428 + 5.77 0.000 Intergenic Intergenic -34964 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr20-2970 chr20 35725664 35725874 + 5.77 0.000 intron (NR_040722, intron 7 of 17) AluSq2|SINE|Alu 16491 NR_040722 9584 Hs.282901 NM_004902 ENSG00000131051 RBM39 CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 RNA binding motif protein 39 protein-coding chr12-3816 chr12 70365909 70366119 + 5.77 0.000 promoter-TSS (NM_014505) promoter-TSS (NM_014505) -276 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 - potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding chr16-3887 chr16 74826406 74826616 + 5.77 0.000 Intergenic Intergenic -51691 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr17-6315 chr17 58284399 58284609 + 5.77 0.000 Intergenic Intergenic -3569 NM_000250 4353 Hs.458272 NM_000250 ENSG00000005381 MPO - myeloperoxidase protein-coding chr5-7543 chr5 38378167 38378377 + 5.77 0.000 intron (NM_152403, intron 6 of 21) intron (NM_152403, intron 6 of 21) 25199 NR_102749 100506475 Hs.662304 NR_102749 ENSG00000248572 EGFLAM-AS2 - EGFLAM antisense RNA 2 ncRNA chr3-9089 chr3 27917970 27918180 + 5.77 0.000 Intergenic L1MC4a|LINE|L1 -83939 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr7-9285 chr7 125848233 125848443 + 5.77 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -584047 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr13-3005 chr13 110996113 110996323 + 5.77 0.000 Intergenic L1PA10|LINE|L1 30191 NR_126378 104355135 Hs.649708 NR_126378 LINC00431 - long intergenic non-protein coding RNA 431 ncRNA chr17-8055 chr17 51133067 51133277 + 5.77 0.000 Intergenic Intergenic -12304 NM_003971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr6-8246 chr6 137536933 137537143 + 5.77 0.000 Intergenic L2a|LINE|L2 -42644 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr17-8142 chr17 59300444 59300654 + 5.77 0.000 Intergenic Intergenic -31106 NM_001005404 388403 Hs.463613 NM_001005404 ENSG00000175155 YPEL2 FKSG4 yippee like 2 protein-coding chr12-7685 chr12 88721550 88721760 + 5.77 0.000 Intergenic L2a|LINE|L2 -141182 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr2-10337 chr2 158707257 158707467 + 5.77 0.000 intron (NR_135242, intron 1 of 3) L1MCa|LINE|L1 27640 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr5-3584 chr5 81176818 81177028 + 5.77 0.000 intron (NM_006909, intron 17 of 26) L1MEd|LINE|L1 -56397 NM_001825 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr3-7387 chr3 75619592 75619802 + 5.77 0.000 Intergenic CpG -11066 NR_031714 100302212 NR_031714 ENSG00000283894 MIR1324 MIRN1324|hsa-mir-1324 microRNA 1324 ncRNA chr3-9620 chr3 58197079 58197289 + 5.77 0.000 intron (NM_004944, intron 6 of 7) MIRb|SINE|MIR 13788 NM_004944 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding chr16-3557 chr16 56570952 56571162 + 5.77 0.000 Intergenic MER115|DNA|hAT-Tip100 5984 NM_032935 84560 Hs.567624 NM_032935 ENSG00000102891 MT4 MT-4|MT-IV|MTIV metallothionein 4 protein-coding chr2-11432 chr2 222283772 222283982 + 5.77 0.000 intron (NM_181457, intron 4 of 7) intron (NM_181457, intron 4 of 7) -14270 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr17-8509 chr17 79069714 79069924 + 5.77 0.000 Intergenic AluSz6|SINE|Alu -5118 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr6-4582 chr6 43447528 43447738 + 5.77 0.000 intron (NM_033450, intron 15 of 19) intron (NM_033450, intron 15 of 19) 7915 NM_001286656 65989 Hs.337251 NM_023932 ENSG00000171462 DLK2 DLK-2|EGFL9 delta like non-canonical Notch ligand 2 protein-coding chr17-5582 chr17 47225437 47225647 + 5.77 0.000 Intergenic Intergenic 16194 NM_002476 4635 Hs.463300 NM_002476 ENSG00000198336 MYL4 ALC1|AMLC|GT1|PRO1957 myosin light chain 4 protein-coding chr7-8377 chr7 44545630 44545840 + 5.77 0.000 Intergenic AluJr|SINE|Alu -4405 NM_001101648 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr10-5024 chr10 34102978 34103188 + 5.77 0.000 Intergenic Intergenic -330403 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr11-5963 chr11 17821753 17821963 + 5.77 0.000 intron (NR_104040, intron 11 of 11) L2c|LINE|L2 85910 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr14-3838 chr14 74583705 74583915 + 5.77 0.000 intron (NM_000428, intron 3 of 35) L2b|LINE|L2 28427 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr4-6400 chr4 119314532 119314742 + 5.77 0.000 Intergenic Intergenic 7501 NM_000134 2169 Hs.282265 NM_000134 ENSG00000145384 FABP2 FABPI|I-FABP fatty acid binding protein 2 protein-coding chr12-6111 chr12 125186232 125186442 + 5.77 0.000 promoter-TSS (NM_001366854) promoter-TSS (NM_001366854) -49 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr19-5510 chr19 46610759 46610969 + 5.77 0.000 TTS (NM_005184) TTS (NM_005184) 8792 NM_001329922 808 Hs.515487 NM_005184 ENSG00000160014 CALM3 CALM|CAM1|CAM2|CAMB|CaM|CaMIII|HEL-S-72|PHKD|PHKD3 calmodulin 3 protein-coding chr9-7663 chr9 69009444 69009654 + 5.77 0.000 TTS (NM_001278253) TTS (NM_001278253) 4574 NM_002732 5568 Hs.158029 NM_002732 ENSG00000165059 PRKACG BDPLT19|KAPG|PKACg protein kinase cAMP-activated catalytic subunit gamma protein-coding chr10-5571 chr10 89836029 89836239 + 5.77 0.000 intron (NR_038382, intron 3 of 3) MLT1N2|LTR|ERVL-MaLR 6641 NR_038382 643529 Hs.618956 NR_038382 ENSG00000232229 LINC00865 - long intergenic non-protein coding RNA 865 ncRNA chr11-4909 chr11 62732900 62733110 + 5.77 0.000 intron (NM_173810, intron 1 of 2) L3|LINE|CR1 4519 NM_173810 283237 Hs.31704 NM_173810 ENSG00000162222 TTC9C - tetratricopeptide repeat domain 9C protein-coding chr4-3223 chr4 43672518 43672728 + 5.77 0.000 Intergenic LTR12C|LTR|ERV1 -180080 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr10-7145 chr10 101247972 101248182 + 5.77 0.000 Intergenic AluSx1|SINE|Alu 15473 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr9-8535 chr9 126332243 126332453 + 5.77 0.000 intron (NM_033446, intron 1 of 9) intron (NM_033446, intron 1 of 9) 5519 NM_001011703 89853 Hs.162659 NM_033446 ENSG00000196814 MVB12B C9orf28|FAM125B multivesicular body subunit 12B protein-coding chr1-7360 chr1 19149498 19149708 + 5.77 0.000 intron (NM_020765, intron 49 of 105) intron (NM_020765, intron 49 of 105) 60663 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr8-2213 chr8 13368526 13368736 + 5.77 0.000 intron (NM_024767, intron 4 of 4) intron (NM_024767, intron 4 of 4) -91847 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr12-6211 chr12 24654739 24654949 + 5.77 0.000 Intergenic L1MA3|LINE|L1 -70676 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr7-7732 chr7 748590 748800 + 5.77 0.000 intron (NR_075098, intron 4 of 12) intron (NR_075098, intron 4 of 12) -21019 NM_001164758 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr20-3095 chr20 24821721 24821931 + 5.77 0.000 Intergenic Intergenic -127443 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr2-10774 chr2 42556147 42556357 + 5.77 0.000 intron (NM_001282755, intron 2 of 17) intron (NM_001282755, intron 2 of 17) -11793 NM_001282756 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr7-9226 chr7 119217532 119217742 + 5.77 0.000 Intergenic L1PB3|LINE|L1 689738 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr7-8844 chr7 87436454 87436664 + 5.77 0.000 intron (NM_018849, intron 14 of 27) MLT1H-int|LTR|ERVL-MaLR 39121 NM_018849 5244 Hs.654403 NM_000443 ENSG00000005471 ABCB4 ABC21|GBD1|ICP3|MDR2|MDR2/3|MDR3|PFIC-3|PGY3 ATP binding cassette subfamily B member 4 protein-coding chr1-10594 chr1 176468005 176468215 + 5.77 0.000 intron (NM_021936, intron 1 of 4) intron (NM_021936, intron 1 of 4) 4935 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr19-4384 chr19 2884012 2884222 + 5.77 0.000 TTS (NM_024967) TTS (NM_024967) 16782 NM_024967 80032 Hs.287433 NM_024967 ENSG00000172000 ZNF556 - zinc finger protein 556 protein-coding chr15-4121 chr15 79205081 79205291 + 5.77 0.000 intron (NR_038997, intron 1 of 1) intron (NR_038997, intron 1 of 1) -4602 NR_029705 406960 NR_029705 ENSG00000207695 MIR184 EDICT|MIRN184|miR-184 microRNA 184 ncRNA chr17-3920 chr17 57257054 57257264 + 5.77 0.000 intron (NM_001322250, intron 2 of 13) intron (NM_001322250, intron 2 of 13) 140 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr1-16576 chr1 235606451 235606661 + 5.77 0.000 intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 43228 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr1-13809 chr1 19054584 19054794 + 5.77 0.000 Intergenic Intergenic -98013 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr4-6868 chr4 10398721 10398931 + 5.77 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 58600 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr2-14766 chr2 240323077 240323287 + 5.77 0.000 Intergenic CpG -112481 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr16-5946 chr16 3903135 3903345 + 5.77 0.000 Intergenic Intergenic -22527 NM_004380 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr5-6771 chr5 85834216 85834426 + 5.77 0.000 Intergenic L2c|LINE|L2 -448123 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr11-9409 chr11 58238086 58238296 + 5.77 0.000 Intergenic MER103C|DNA|hAT-Charlie -9273 NM_001004471 219960 Hs.553646 NM_001004471 ENSG00000180475 OR10Q1 OR11-233 olfactory receptor family 10 subfamily Q member 1 protein-coding chr16-5945 chr16 3822424 3822634 + 5.77 0.000 intron (NM_004380, intron 2 of 30) intron (NM_004380, intron 2 of 30) 57591 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr9-6473 chr9 91460190 91460400 + 5.77 0.000 Intergenic AluSz|SINE|Alu -35669 NM_001290000 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr6-4589 chr6 43696542 43696752 + 5.77 0.000 Intergenic Intergenic -8835 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr2-12116 chr2 35442749 35442959 + 5.77 0.000 Intergenic Intergenic -28551 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr2-13229 chr2 124511446 124511656 + 5.77 0.000 intron (NM_130773, intron 8 of 23) MIR3|SINE|MIR 486264 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr2-10942 chr2 79220222 79220432 + 5.77 0.000 Intergenic LTR79|LTR|ERVL -60574 NM_138937 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding chr7-6179 chr7 128747709 128747919 + 5.77 0.000 5' UTR (NM_001199671, exon 2 of 8) 5' UTR (NM_001199671, exon 2 of 8) 8455 NR_074086 813 Hs.7753 NM_001219 ENSG00000128595 CALU - calumenin protein-coding chr8-6437 chr8 60328573 60328783 + 5.77 0.000 Intergenic Intergenic -47278 NR_135821 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr21-1584 chr21 15302833 15303043 + 5.77 0.000 Intergenic Intergenic -237938 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr17-5720 chr17 57402217 57402427 + 5.77 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) 121275 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr8-5438 chr8 37391631 37391841 + 5.77 0.000 Intergenic AluSp|SINE|Alu 102177 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr9-8275 chr9 112764345 112764555 + 5.77 0.000 intron (NM_001012994, intron 1 of 8) AluJr4|SINE|Alu 13690 NM_001012994 401548 Hs.522350 NM_001012994 ENSG00000148158 SNX30 ATG24A sorting nexin family member 30 protein-coding chr12-5557 chr12 4969280 4969490 + 5.77 0.000 Intergenic Intergenic 59480 NM_000217 3736 Hs.416139 NM_000217 ENSG00000111262 KCNA1 AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1 potassium voltage-gated channel subfamily A member 1 protein-coding chr5-8297 chr5 114414505 114414715 + 5.77 0.000 intron (NM_021614, intron 3 of 7) intron (NM_021614, intron 3 of 7) -18901 NR_103458 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr7-4185 chr7 127533433 127533643 + 5.77 0.000 Intergenic Intergenic 52058 NM_024523 79571 Hs.521168 NM_024523 ENSG00000179562 GCC1 GCC1P|GCC88 GRIP and coiled-coil domain containing 1 protein-coding chr2-11782 chr2 14558492 14558702 + 5.77 0.000 Intergenic Intergenic -74120 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr6-3683 chr6 154479788 154479998 + 5.77 0.000 intron (NM_001368117, intron 1 of 12) intron (NM_001368117, intron 1 of 12) -1402 NM_001368118 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chrX-2324 chrX 56118787 56118997 + 5.77 0.000 intron (NM_001324104, intron 2 of 6) intron (NM_001324104, intron 2 of 6) -113464 NR_136705 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr3-9179 chr3 34302127 34302337 + 5.77 0.000 Intergenic L1ME3A|LINE|L1 503602 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr14-4656 chr14 54916281 54916491 + 5.77 0.000 Intergenic Charlie2b|DNA|hAT-Charlie -13560 NM_001024071 2643 Hs.86724 NM_000161 ENSG00000131979 GCH1 DYT14|DYT5|DYT5a|GCH|GTP-CH-1|GTPCH1|HPABH4B GTP cyclohydrolase 1 protein-coding chr3-10767 chr3 157098827 157099037 + 5.77 0.000 intron (NR_034008, intron 1 of 2) MIRb|SINE|MIR 9051 NR_034008 100498859 Hs.633655 NR_034008 ENSG00000241135 LINC00881 - long intergenic non-protein coding RNA 881 ncRNA chr9-6414 chr9 40886325 40886535 + 5.77 0.000 Intergenic LTR7B|LTR|ERV1 42662 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr2-11374 chr2 211335992 211336202 + 5.77 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 718526 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr1-15583 chr1 160129291 160129501 + 5.77 0.000 exon (NM_000702, exon 11 of 23) exon (NM_000702, exon 11 of 23) 13637 NM_000702 477 Hs.34114 NM_000702 ENSG00000018625 ATP1A2 FHM2|MHP2 ATPase Na+/K+ transporting subunit alpha 2 protein-coding chr5-7077 chr5 173752937 173753147 + 5.77 0.000 Intergenic Intergenic -6833 NR_108027 101928136 Hs.449267 NR_108027 ENSG00000253686 LINC01484 - long intergenic non-protein coding RNA 1484 ncRNA chr6-6624 chr6 151067886 151068096 + 5.77 0.000 intron (NM_001350486, intron 26 of 27) intron (NM_001350486, intron 26 of 27) -34684 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr14-2807 chr14 22532227 22532437 + 5.77 0.000 Intergenic MIRb|SINE|MIR 24730 NR_146543 105370400 NR_146543 ENSG00000259054 LINC02332 - long intergenic non-protein coding RNA 2332 ncRNA chr14-2110 chr14 74463108 74463318 + 5.77 0.000 Intergenic L2c|LINE|L2 16991 NR_039858 100616211 NR_039858 ENSG00000283944 MIR4709 mir-4709 microRNA 4709 ncRNA chr20-1780 chr20 56005575 56005785 + 5.77 0.000 promoter-TSS (NM_080617) promoter-TSS (NM_080617) -161 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr9-6126 chr9 22405911 22406121 + 5.77 0.000 Intergenic L1PA16|LINE|L1 -40808 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr1-14185 chr1 33614098 33614308 + 5.77 0.000 intron (NM_052896, intron 40 of 69) intron (NM_052896, intron 40 of 69) 141558 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr1-11818 chr1 29134352 29134562 + 5.77 0.000 Intergenic CpG -10554 NM_001003682 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr11-3910 chr11 119321494 119321704 + 5.77 0.000 Intergenic Intergenic -4469 NM_006500 4162 Hs.599039 NM_006500 ENSG00000076706 MCAM CD146|HEMCAM|METCAM|MUC18|MelCAM melanoma cell adhesion molecule protein-coding chr18-1692 chr18 79882363 79882573 + 5.77 0.000 intron (NM_012283, intron 1 of 1) L1MC|LINE|L1 18800 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr4-4963 chr4 129904073 129904283 + 5.77 0.000 intron (NR_151713, intron 12 of 16) intron (NR_151713, intron 12 of 16) 132559 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr10-6360 chr10 131115548 131115758 + 5.77 0.000 intron (NM_174937, intron 9 of 11) intron (NM_174937, intron 9 of 11) 20435 NR_120623 101927489 Hs.659317 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA chr1-12047 chr1 114229189 114229399 + 5.77 0.000 Intergenic Intergenic -75425 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr7-9482 chr7 135879139 135879349 + 5.77 0.000 Intergenic Intergenic 98115 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding chr1-7532 chr1 174519660 174519870 + 5.77 0.000 intron (NM_001366446, intron 13 of 25) intron (NM_001366446, intron 13 of 25) 71801 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr9-8961 chr9 138120020 138120230 + 5.77 0.000 intron (NM_001243812, intron 43 of 45) intron (NM_001243812, intron 43 of 45) -29988 NR_027156 643224 Hs.551805 NR_027156 TUBBP5 - tubulin beta pseudogene 5 pseudo chr1-8528 chr1 156701004 156701214 + 5.77 0.000 intron (NM_001199723, intron 2 of 4) intron (NM_001199723, intron 2 of 4) 4474 NM_001878 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding chr3-8095 chr3 13834215 13834425 + 5.77 0.000 intron (NM_004625, intron 3 of 3) L1MC5a|LINE|L1 45751 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding chr5-3054 chr5 28096962 28097172 + 5.77 0.000 Intergenic AluJr|SINE|Alu 190598 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr13-3479 chr13 18947177 18947387 + 5.77 0.000 Intergenic Intergenic 41843 NR_104118 100652856 Hs.549878 NR_104118 LINC00408 - long intergenic non-protein coding RNA 408 ncRNA chr10-7064 chr10 86743775 86743985 + 5.77 0.000 Intergenic Intergenic -12759 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr11-7434 chr11 116488639 116488849 + 5.77 0.000 Intergenic Intergenic -150678 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr7-6161 chr7 127674148 127674358 + 5.77 0.000 intron (NM_014390, intron 1 of 23) L1MC4|LINE|L1 22059 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr2-13320 chr2 131662576 131662786 + 5.77 0.000 Intergenic Intergenic -19818 NM_001354872 29798 Hs.635289 NM_013310 C2orf27A C2orf27|C2orf27B chromosome 2 open reading frame 27A protein-coding chr1-15131 chr1 102836431 102836641 + 5.77 0.000 Intergenic L1PA4|LINE|L1 271960 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr2-13120 chr2 114640677 114640887 + 5.77 0.000 intron (NM_001321908, intron 2 of 25) intron (NM_001321908, intron 2 of 25) 179205 NM_001321908 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr2-12439 chr2 58252089 58252299 + 5.77 0.000 Intergenic Intergenic -10814 NM_001114636 55120 Hs.631890 NM_018062 ENSG00000115392 FANCL FAAP43|PHF9|POG FA complementation group L protein-coding chr4-8480 chr4 159203092 159203302 + 5.77 0.000 intron (NM_001351724, intron 3 of 30) intron (NM_001351724, intron 3 of 30) -24435 NM_001351726 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr17-7479 chr17 15437185 15437395 + 5.77 0.000 non-coding (NR_037924, exon 6 of 6) non-coding (NR_037924, exon 6 of 6) 30331 NM_001204477 284040 Hs.164595 NM_173622 ENSG00000239704 CDRT4 - CMT1A duplicated region transcript 4 protein-coding chr1-9167 chr1 20256994 20257204 + 5.77 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 14004 NR_147205 105376827 Hs.559701 NR_147205 ENSG00000228105 LINC01757 - long intergenic non-protein coding RNA 1757 ncRNA chr3-3583 chr3 57518371 57518581 + 5.77 0.000 intron (NM_198564, intron 4 of 11) AluSz|SINE|Alu 25868 NM_001366028 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr3-9374 chr3 47188968 47189178 + 5.77 0.000 intron (NR_033373, intron 2 of 6) AluSg|SINE|Alu 24703 NR_033373 285352 Hs.570631 NR_033373 KIF9-AS1 - KIF9 antisense RNA 1 ncRNA chr14-3990 chr14 35253674 35253884 + 5.77 0.000 intron (NM_014672, intron 5 of 7) L2c|LINE|L2 -24779 NM_001282234 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr3-8010 chr3 187657508 187657718 + 5.77 0.000 Intergenic Intergenic 12781 NM_001048 6750 Hs.12409 NM_001048 ENSG00000157005 SST SMST somatostatin protein-coding chr13-4064 chr13 75803221 75803431 + 5.77 0.000 intron (NM_005358, intron 8 of 29) intron (NM_005358, intron 8 of 29) 42665 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr10-5394 chr10 75105020 75105230 + 5.77 0.000 intron (NM_001007273, intron 1 of 5) intron (NM_001007273, intron 1 of 5) 4066 NM_001007272 51207 Hs.178170 NM_016364 ENSG00000079393 DUSP13 BEDP|DUSP13A|DUSP13B|MDSP|SKRP4|TMDP dual specificity phosphatase 13 protein-coding chr12-6199 chr12 22082530 22082740 + 5.77 0.000 Intergenic LTR16A|LTR|ERVL 36417 NM_018686 55907 Hs.311346 NM_018686 ENSG00000111726 CMAS CSS cytidine monophosphate N-acetylneuraminic acid synthetase protein-coding chr4-6268 chr4 76590355 76590565 + 5.77 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 14909 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr4-3868 chr4 138037270 138037480 + 5.77 0.000 intron (NR_037866, intron 8 of 10) MER41B|LTR|ERV1 -51639 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chrX-5038 chrX 121948982 121949192 + 5.77 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 578115 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr10-7499 chr10 12187158 12187368 + 5.77 0.000 intron (NM_001321648, intron 1 of 10) AluJb|SINE|Alu 8628 NM_014142 11164 Hs.555956 NM_014142 ENSG00000165609 NUDT5 YSA1|YSA1H|YSAH1|hNUDT5 nudix hydrolase 5 protein-coding chr13-3132 chr13 80440369 80440579 + 5.77 0.000 Intergenic Intergenic -99348 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr4-8739 chr4 185562289 185562499 + 5.77 0.000 Intergenic Intergenic -26836 NR_047562 27295 Hs.701364 NM_014476 ENSG00000154553 PDLIM3 ALP PDZ and LIM domain 3 protein-coding chr13-2375 chr13 40210805 40211015 + 5.77 0.000 intron (NR_033877, intron 1 of 5) intron (NR_033877, intron 1 of 5) 9592 NR_033877 400123 Hs.577960 NR_033877 ENSG00000215483 LINC00548 - long intergenic non-protein coding RNA 548 ncRNA chr3-5549 chr3 3261819 3262029 + 5.77 0.000 Intergenic Intergenic -82207 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr16-6732 chr16 74400856 74401066 + 5.77 0.000 Intergenic AluSq2|SINE|Alu 6258 NR_135170 105376772 Hs.742071 NR_135170 LOC105376772 - uncharacterized LOC105376772 ncRNA chr6-7926 chr6 109773203 109773413 + 5.77 0.000 intron (NM_014845, intron 15 of 22) MLT1E2|LTR|ERVL-MaLR 82087 NM_014845 9896 Hs.529959 NM_014845 ENSG00000112367 FIG4 ALS11|BTOP|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding chr13-1637 chr13 57753973 57754183 + 5.77 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 122334 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr14-5061 chr14 83125116 83125326 + 5.77 0.000 Intergenic Intergenic 482589 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chrX-1487 chrX 140931504 140931714 + 5.77 0.000 Intergenic AluJr|SINE|Alu -5378 NR_031725 100302169 NR_031725 ENSG00000221081 MIR320D2 MIR320D-2|MIRN320D2|hsa-mir-320d-2|mir-320d-2 microRNA 320d-2 ncRNA chr10-8127 chr10 69957456 69957666 + 5.77 0.000 intron (NM_080801, intron 38 of 38) intron (NM_080801, intron 38 of 38) -95285 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr1-8031 chr1 231071014 231071224 + 5.77 0.000 Intergenic Intergenic -30865 NM_198552 375061 Hs.38516 NM_198552 ENSG00000182118 FAM89A C1orf153 family with sequence similarity 89 member A protein-coding chr12-7227 chr12 50838747 50838957 + 5.77 0.000 Intergenic L1ME3E|LINE|L1 -4074 NM_182559 283471 Hs.125571 NM_182559 ENSG00000186452 TMPRSS12 CT151 transmembrane serine protease 12 protein-coding chrX-3088 chrX 132902131 132902341 + 5.77 0.000 intron (NM_001077188, intron 3 of 5) AluJb|SINE|Alu 59134 NM_147175 90161 Hs.385956 NM_147175 ENSG00000171004 HS6ST2 MRXSPM heparan sulfate 6-O-sulfotransferase 2 protein-coding chr6-6137 chr6 166676771 166676981 + 5.77 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -49625 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr15-4662 chr15 64727328 64727538 + 5.77 0.000 Intergenic L2c|LINE|L2 -24152 NM_002537 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr14-3738 chr14 35663126 35663336 + 5.77 0.000 intron (NM_014990, intron 26 of 40) intron (NM_014990, intron 26 of 40) 99700 NR_135620 107399303 Hs.742611 NR_135620 SNORA101B ZL4 small nucleolar RNA, H/ACA box 101B snoRNA chr20-4460 chr20 62332892 62333102 + 5.77 0.000 promoter-TSS (NR_039915) promoter-TSS (NR_039915) -440 NR_039915 100616340 NR_039915 ENSG00000284074 MIR4758 - microRNA 4758 ncRNA chr7-6759 chr7 12427419 12427629 + 5.77 0.000 Intergenic AluY|SINE|Alu -23583 NM_001346973 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding chr19-5272 chr19 49376158 49376368 + 5.77 0.000 intron (NR_110729, intron 2 of 2) intron (NR_110729, intron 2 of 2) 11818 NR_110729 101928295 Hs.640180 NR_110729 ENSG00000268686 LOC101928295 - uncharacterized LOC101928295 ncRNA chr3-4830 chr3 141710724 141710934 + 5.77 0.000 intron (NR_136190, intron 6 of 7) intron (NR_136190, intron 6 of 7) -27380 NR_037702 9616 Hs.134623 NM_014245 ENSG00000114125 RNF7 CKBBP1|ROC2|SAG|rbx2 ring finger protein 7 protein-coding chr20-2127 chr20 34548504 34548714 + 5.77 0.000 intron (NM_181509, intron 1 of 4) intron (NM_181509, intron 1 of 4) 1765 NM_181509 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr14-3186 chr14 71726536 71726746 + 5.77 0.000 intron (NM_001354286, intron 20 of 24) intron (NM_001354286, intron 20 of 24) 140343 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr14-4520 chr14 39369228 39369438 + 5.77 0.000 intron (NM_001354155, intron 22 of 22) intron (NM_001354155, intron 22 of 22) 63167 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr9-6757 chr9 20744080 20744290 + 5.77 0.000 intron (NM_017794, intron 7 of 45) intron (NM_017794, intron 7 of 45) 28080 NR_030166 574444 NR_030166 ENSG00000207609 MIR491 MIRN491|hsa-mir-491|mir-491 microRNA 491 ncRNA chr9-8561 chr9 127329256 127329466 + 5.77 0.000 intron (NR_104591, intron 7 of 26) MER94|DNA|hAT-Blackjack 64587 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr3-7901 chr3 133987906 133988116 + 5.77 0.000 intron (NM_005630, intron 1 of 13) intron (NM_005630, intron 1 of 13) 41914 NM_005630 6578 Hs.518270 NM_005630 ENSG00000174640 SLCO2A1 MATR1|OATP2A1|PGT|PHOAR2|SLC21A2 solute carrier organic anion transporter family member 2A1 protein-coding chr9-6902 chr9 90863213 90863423 + 5.77 0.000 intron (NM_001174167, intron 4 of 13) intron (NM_001174167, intron 4 of 13) 35898 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr7-3317 chr7 57642477 57642687 + 5.77 0.000 Intergenic Intergenic 192405 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr1-10519 chr1 167869367 167869577 + 5.77 0.000 intron (NM_018417, intron 14 of 32) LTR2B|LTR|ERV1 44662 NM_018417 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr12-2290 chr12 111789404 111789614 + 5.77 0.000 intron (NM_000690, intron 4 of 12) AluSg7|SINE|Alu -10325 NR_106819 102465456 NR_106819 ENSG00000274697 MIR6761 hsa-mir-6761 microRNA 6761 ncRNA chr12-5291 chr12 111035099 111035309 + 5.77 0.000 intron (NM_015267, intron 1 of 21) CpG 1039 NM_015267 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr12-5066 chr12 91327317 91327527 + 5.77 0.000 Intergenic Intergenic -144605 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr20-4134 chr20 43421389 43421599 + 5.77 0.000 Intergenic L1M2c|LINE|L1 -36402 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chrX-4392 chrX 51623376 51623586 + 5.77 0.000 Intergenic L1PA5|LINE|L1 -4563 NM_001355276 347549 NM_001355276 ENSG00000224109 CENPVL3 CENPVP3 centromere protein V like 3 protein-coding chr1-12599 chr1 35173386 35173596 + 5.77 0.000 Intergenic L1MB7|LINE|L1 19654 NR_136702 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr1-12737 chr1 60749079 60749289 + 5.77 0.000 intron (NR_110628, intron 1 of 5) intron (NR_110628, intron 1 of 5) 76400 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr16-6620 chr16 67758504 67758714 + 5.77 0.000 intron (NM_001320238, intron 2 of 12) intron (NM_001320238, intron 2 of 12) -39293 NM_001243650 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr6-5611 chr6 43933152 43933362 + 5.77 0.000 intron (NR_024478, intron 1 of 1) intron (NR_024478, intron 1 of 1) 42229 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr8-7530 chr8 144119246 144119456 + 5.77 0.000 Intergenic MER101-int|LTR|ERV1 11612 NM_001316309 340390 Hs.98723 NM_032529 ENSG00000179698 WDR97 KIAA1875 WD repeat domain 97 protein-coding chr17-6284 chr17 43570473 43570683 + 5.77 0.000 Intergenic AluSz6|SINE|Alu -24238 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr8-3377 chr8 56447873 56448083 + 5.77 0.000 intron (NR_125813, intron 1 of 3) intron (NR_125813, intron 1 of 3) -1337 NM_001135690 5179 Hs.339831 NM_006211 ENSG00000181195 PENK PE|PENK-A proenkephalin protein-coding chr2-12269 chr2 45769124 45769334 + 5.77 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 117554 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr19-5951 chr19 55931827 55932037 + 5.77 0.000 intron (NM_176810, intron 1 of 10) intron (NM_176810, intron 1 of 10) 404 NM_176810 126204 Hs.446924 NM_176810 ENSG00000173572 NLRP13 CLR19.7|NALP13|NOD14|PAN13 NLR family pyrin domain containing 13 protein-coding chrX-4812 chrX 101263627 101263837 + 5.77 0.000 3' UTR (NM_001171184, exon 22 of 22) 3' UTR (NM_001171184, exon 22 of 22) 27602 NM_001168474 54457 Hs.223806 NM_024885 ENSG00000102387 TAF7L CT40|TAF2Q TATA-box binding protein associated factor 7 like protein-coding chr17-8154 chr17 59899184 59899394 + 5.77 0.000 intron (NM_001272044, intron 2 of 15) intron (NM_001272044, intron 2 of 15) 6168 NR_161455 6198 Hs.463642 NM_003161 ENSG00000108443 RPS6KB1 PS6K|S6K|S6K-beta-1|S6K1|STK14A|p70 S6KA|p70(S6K)-alpha|p70-S6K|p70-alpha ribosomal protein S6 kinase B1 protein-coding chr9-7629 chr9 38333171 38333381 + 5.77 0.000 Intergenic Intergenic -59426 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr12-5974 chr12 90793250 90793460 + 5.77 0.000 Intergenic Arthur1|DNA|hAT-Tip100 -124668 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr4-7023 chr4 25769394 25769604 + 5.77 0.000 intron (NM_001297592, intron 17 of 23) intron (NM_001297592, intron 17 of 23) 93489 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding chr13-2870 chr13 110854945 110855155 + 5.77 0.000 Intergenic Intergenic 15258 NR_027701 283487 Hs.245390 NM_178514 ENSG00000255874 LINC00346 C13orf29|NCRNA00346 long intergenic non-protein coding RNA 346 ncRNA chr6-7698 chr6 86706673 86706883 + 5.77 0.000 Intergenic L1PA10|LINE|L1 -230750 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr4-3810 chr4 112359053 112359263 + 5.77 0.000 intron (NM_001102406, intron 2 of 15) intron (NM_001102406, intron 2 of 15) 61789 NM_001102406 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr15-2703 chr15 88136453 88136663 + 5.77 0.000 exon (NM_001012338, exon 8 of 20) exon (NM_001012338, exon 8 of 20) 69416 NM_001320135 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr11-6694 chr11 77571023 77571233 + 5.77 0.000 promoter-TSS (NR_130930) promoter-TSS (NR_130930) 39 NR_130930 646029 Hs.609654 NM_001039908 LOC646029 - uncharacterized LOC646029 ncRNA chr1-16040 chr1 201206450 201206660 + 5.77 0.000 exon (NM_001164586, exon 12 of 24) exon (NM_001164586, exon 12 of 24) 15730 NM_001164586 91156 Hs.519024 NM_178275 ENSG00000163395 IGFN1 EEF1A2BP1 immunoglobulin like and fibronectin type III domain containing 1 protein-coding chr4-8607 chr4 171195834 171196044 + 5.77 0.000 Intergenic Intergenic 9755 NR_106730 102466953 NR_106730 ENSG00000278502 MIR6082 hsa-mir-6082 microRNA 6082 ncRNA chr1-16573 chr1 235122602 235122812 + 5.77 0.000 intron (NM_014765, intron 1 of 4) intron (NM_014765, intron 1 of 4) 5230 NR_002956 677802 Hs.744743 NR_002956 ENSG00000207181 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA chr3-5368 chr3 147930420 147930630 + 5.77 0.000 Intergenic Intergenic -147634 NR_134937 100507461 Hs.112623 NR_134937 ENSG00000241131 LINC02032 - long intergenic non-protein coding RNA 2032 ncRNA chr3-4348 chr3 183552548 183552758 + 5.77 0.000 TTS (NR_046687) TTS (NR_046687) 3053 NM_130446 89857 Hs.659147 NM_130446 ENSG00000172578 KLHL6 - kelch like family member 6 protein-coding chr10-7916 chr10 50764662 50764872 + 5.77 0.000 Intergenic THE1B|LTR|ERVL-MaLR 24831 NM_001321959 653308 Hs.659820 NM_001079516 ENSG00000204147 ASAH2B ASAH2C|ASAH2L|bA449O16.3|bA98I6.3 N-acylsphingosine amidohydrolase 2B protein-coding chrX-3979 chrX 13790860 13791070 + 5.77 0.000 intron (NM_001318729, intron 1 of 6) intron (NM_001318729, intron 1 of 6) 26128 NM_001001995 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr3-10215 chr3 121652390 121652600 + 5.77 0.000 intron (NM_001292041, intron 3 of 12) AluSz|SINE|Alu 8408 NM_001292041 3059 Hs.14601 NM_005335 ENSG00000180353 HCLS1 CTTNL|HS1|lckBP1|p75 hematopoietic cell-specific Lyn substrate 1 protein-coding chr9-4241 chr9 86731556 86731766 + 5.77 0.000 Intergenic Intergenic 215845 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chrX-1013 chrX 47161565 47161775 + 5.77 0.000 intron (NM_152856, intron 2 of 22) AluJb|SINE|Alu 16449 NM_005676 8241 Hs.401509 NM_005676 ENSG00000182872 RBM10 DXS8237E|GPATC9|GPATCH9|S1-1|TARPS|ZRANB5 RNA binding motif protein 10 protein-coding chr12-4711 chr12 49849004 49849214 + 5.77 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -6003 NM_181708 144233 Hs.142736 NM_181708 ENSG00000186666 BCDIN3D - BCDIN3 domain containing RNA methyltransferase protein-coding chr6-6552 chr6 133455498 133455708 + 5.77 0.000 intron (NM_001301013, intron 5 of 19) intron (NM_001301013, intron 5 of 19) 214104 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr16-5625 chr16 61274354 61274564 + 5.77 0.000 Intergenic Intergenic -218693 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr19-6307 chr19 8709761 8709971 + 5.77 0.000 Intergenic Intergenic -11071 NM_178525 284382 Hs.209206 NM_178525 ENSG00000181786 ACTL9 HSD21 actin like 9 protein-coding chr13-4274 chr13 98026149 98026359 + 5.77 0.000 Intergenic AluSc|SINE|Alu 72579 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr5-8252 chr5 111518787 111518997 + 5.77 0.000 intron (NR_040093, intron 1 of 6) MLT1K|LTR|ERVL-MaLR -6295 NR_131752 134429 Hs.93842 NM_139164 ENSG00000164211 STARD4 - StAR related lipid transfer domain containing 4 protein-coding chr16-6123 chr16 19193898 19194108 + 5.77 0.000 intron (NM_001308157, intron 5 of 7) LTR16C|LTR|ERVL 21668 NM_001308157 51760 Hs.258326 NM_016524 ENSG00000103528 SYT17 sytXVII synaptotagmin 17 protein-coding chr13-4400 chr13 109686406 109686616 + 5.77 0.000 Intergenic Intergenic -41763 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr1-11095 chr1 229168273 229168483 + 5.77 0.000 Intergenic Intergenic 6423 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr5-8350 chr5 119795713 119795923 + 5.77 0.000 Intergenic LTR8|LTR|ERV1 166259 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr3-10462 chr3 133734353 133734563 + 5.77 0.000 intron (NM_001354703, intron 7 of 22) L1MC4|LINE|L1 -11935 NM_001354704 7018 Hs.518267 NM_001063 ENSG00000091513 TF HEL-S-71p|PRO1557|PRO2086|TFQTL1 transferrin protein-coding chr11-5580 chr11 107338550 107338760 + 5.77 0.000 intron (NM_152434, intron 14 of 17) L1PA11|LINE|L1 119191 NM_152434 143884 Hs.212140 NM_152434 ENSG00000152404 CWF19L2 - CWF19 like cell cycle control factor 2 protein-coding chr3-10530 chr3 138984899 138985109 + 5.77 0.000 Intergenic Intergenic 21264 NM_001134659 729627 Hs.121314 NM_001134659 ENSG00000206260 PRR23A - proline rich 23A protein-coding chr2-10934 chr2 76455817 76456027 + 5.77 0.000 Intergenic Intergenic -530043 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr12-4453 chr12 13012423 13012633 + 5.77 0.000 intron (NR_149067, intron 2 of 2) intron (NR_149067, intron 2 of 2) 12086 NR_002774 93164 Hs.593282 NR_002774 ENSG00000183935 HTR7P1 HTR7P 5-hydroxytryptamine receptor 7 pseudogene 1 pseudo chr9-7917 chr9 89398086 89398296 + 5.77 0.000 intron (NM_001371200, intron 7 of 20) LTR28B|LTR|ERV1 79340 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr11-6276 chr11 59475541 59475751 + 5.77 0.000 Intergenic L2b|LINE|L2 -1784 NM_001004705 390197 Hs.553756 NM_001004705 ENSG00000254466 OR4D10 OR11-251|OR4D10P|OST711 olfactory receptor family 4 subfamily D member 10 protein-coding chr1-13313 chr1 239367308 239367518 + 5.77 0.000 Intergenic LTR16E1|LTR|ERVL -19155 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr9-7040 chr9 123021119 123021329 + 5.77 0.000 intron (NM_012197, intron 13 of 25) intron (NM_012197, intron 13 of 25) -12419 NM_005294 2844 Hs.722039 NM_005294 ENSG00000011454 GPR21 - G protein-coupled receptor 21 protein-coding chr19-6674 chr19 34854400 34854610 + 5.77 0.000 Intergenic AluSq2|SINE|Alu -21636 NR_033982 400685 Hs.730118 NR_033982 ENSG00000267767 LINC01801 - long intergenic non-protein coding RNA 1801 ncRNA chr9-6773 chr9 26998813 26999023 + 5.77 0.000 intron (NM_022901, intron 2 of 4) AluSx1|SINE|Alu 6754 NM_022901 64922 Hs.128071 NM_022901 ENSG00000184434 LRRC19 - leucine rich repeat containing 19 protein-coding chr10-6495 chr10 51796438 51796648 + 5.77 0.000 intron (NM_001098512, intron 3 of 17) intron (NM_001098512, intron 3 of 17) -96948 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr2-13934 chr2 183958739 183958949 + 5.77 0.000 Intergenic MIRb|SINE|MIR -420131 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr15-4330 chr15 40273122 40273332 + 5.77 0.000 intron (NM_001128629, intron 6 of 9) intron (NM_001128629, intron 6 of 9) 9359 NM_001190479 100131244 Hs.711376 NM_001190479 ENSG00000230778 ANKRD63 - ankyrin repeat domain 63 protein-coding chr15-3574 chr15 43287068 43287278 + 5.77 0.000 intron (NM_052955, intron 6 of 12) MIRc|SINE|MIR 15082 NM_052955 116179 Hs.164661 NM_052955 ENSG00000159495 TGM7 TGMZ transglutaminase 7 protein-coding chr10-8933 chr10 116585391 116585601 + 5.77 0.000 Intergenic Intergenic -5463 NM_006229 5407 Hs.73923 NM_006229 ENSG00000187021 PNLIPRP1 PLRP1 pancreatic lipase related protein 1 protein-coding chr16-6781 chr16 77484127 77484337 + 5.77 0.000 Intergenic Intergenic -49198 NM_001326358 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr6-4528 chr6 39039435 39039645 + 5.77 0.000 Intergenic Intergenic -9241 NR_136563 2740 Hs.351883 NM_002062 ENSG00000112164 GLP1R GLP-1|GLP-1-R|GLP-1R glucagon like peptide 1 receptor protein-coding chrX-4237 chrX 38825439 38825649 + 5.77 0.000 Intergenic L1MC3|LINE|L1 -21661 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr6-5922 chr6 63677025 63677235 + 5.77 0.000 intron (NM_001370350, intron 2 of 14) L2a|LINE|L2 30604 NM_015153 23469 Hs.348921 NM_015153 ENSG00000118482 PHF3 - PHD finger protein 3 protein-coding chr8-1985 chr8 81281341 81281551 + 5.77 0.000 intron (NM_001444, intron 1 of 3) CpG 910 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding chr9-4258 chr9 94635448 94635658 + 5.77 0.000 intron (NM_000507, intron 1 of 6) intron (NM_000507, intron 1 of 6) 3965 NM_000507 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr14-3477 chr14 101796541 101796751 + 5.77 0.000 intron (NM_001161726, intron 3 of 14) (CAGCC)n|Simple_repeat|Simple_repeat -13189 NM_002719 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr13-2785 chr13 100532233 100532443 + 5.77 0.000 exon (NM_001195087, exon 3 of 3) exon (NM_001195087, exon 3 of 3) 1464 NM_033110 87769 Hs.350868 NM_033110 ENSG00000134864 GGACT A2LD1 gamma-glutamylamine cyclotransferase protein-coding chr5-3530 chr5 11384828 11385038 + 5.77 0.000 exon (NM_001332, exon 7 of 22) exon (NM_001332, exon 7 of 22) 203984 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr19-6299 chr19 8489484 8489694 + 5.77 0.000 TTS (NM_031203) TTS (NM_031203) 13051 NM_032152 84106 Hs.465812 NM_032152 ENSG00000133246 PRAM1 PML-RAR|PRAM-1 PML-RARA regulated adaptor molecule 1 protein-coding chr15-4726 chr15 67825973 67826183 + 5.77 0.000 exon (NM_001365915, exon 2 of 9) exon (NM_001365915, exon 2 of 9) 569 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr2-14086 chr2 199443989 199444199 + 5.77 0.000 intron (NM_001172509, intron 2 of 10) intron (NM_001172509, intron 2 of 10) 13845 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr9-8265 chr9 112338560 112338770 + 5.77 0.000 Intergenic Intergenic -5001 NM_001163790 9991 Hs.269988 NM_005156 ENSG00000119314 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding chr6-7659 chr6 83781633 83781843 + 5.77 0.000 Intergenic Intergenic -71528 NM_001009994 134701 Hs.149454 NM_001009994 ENSG00000203877 RIPPLY2 C6orf159|SCDO6|dJ237I15.1 ripply transcriptional repressor 2 protein-coding chr8-6489 chr8 63658935 63659145 + 5.77 0.000 Intergenic Intergenic -110390 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr5-4465 chr5 7221373 7221583 + 5.77 0.000 Intergenic L1MEf|LINE|L1 47876 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr5-6699 chr5 65127633 65127843 + 5.77 0.000 Intergenic Intergenic 354182 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr1-13120 chr1 195856331 195856541 + 5.77 0.000 Intergenic L1M2|LINE|L1 232279 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr2-14290 chr2 216349997 216350207 + 5.77 0.000 intron (NM_020814, intron 1 of 3) intron (NM_020814, intron 1 of 3) 22381 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chrX-4235 chrX 38784843 38785053 + 5.77 0.000 Intergenic Intergenic -16484 NM_021242 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr2-5580 chr2 172921591 172921801 + 5.77 0.000 intron (NM_001282899, intron 2 of 27) intron (NM_001282899, intron 2 of 27) -6509 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr2-11826 chr2 18505828 18506038 + 5.77 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 54720 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr3-8008 chr3 187165943 187166153 + 5.77 0.000 Intergenic L2a|LINE|L2 -26552 NM_052969 116832 Hs.647900 NM_052969 ENSG00000163923 RPL39L L39-2|RPL39L1 ribosomal protein L39 like protein-coding chr3-5843 chr3 32664921 32665131 + 5.77 0.000 Intergenic Intergenic -20162 NM_001256741 25904 Hs.444851 NM_015442 ENSG00000182973 CNOT10 - CCR4-NOT transcription complex subunit 10 protein-coding chr3-4914 chr3 192756608 192756818 + 5.77 0.000 Intergenic Intergenic -29172 NM_004113 2257 Hs.390250 NM_004113 ENSG00000114279 FGF12 EIEE47|FGF12B|FHF1 fibroblast growth factor 12 protein-coding chr10-8180 chr10 71451114 71451324 + 5.77 0.000 intron (NM_052836, intron 3 of 12) L2a|LINE|L2 54285 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr2-4752 chr2 11508274 11508484 + 5.77 0.000 Intergenic LTR104_Mam|LTR|Gypsy -25666 NM_014668 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr5-6633 chr5 43154380 43154590 + 5.77 0.000 intron (NM_003432, intron 4 of 7) HERVL40-int|LTR|ERVL 32920 NM_001330714 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr2-12133 chr2 37246685 37246895 + 5.77 0.000 intron (NR_146408, intron 8 of 10) MER5A|DNA|hAT-Charlie 15132 NM_001350025 55471 Hs.433466 NM_018607 ENSG00000003509 NDUFAF7 C2orf56|MidA|PRO1853 NADH:ubiquinone oxidoreductase complex assembly factor 7 protein-coding chr9-6483 chr9 94625238 94625448 + 5.77 0.000 intron (NM_000507, intron 1 of 6) intron (NM_000507, intron 1 of 6) 14175 NM_000507 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr14-3105 chr14 65230383 65230593 + 5.77 0.000 Intergenic Intergenic -8141 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr3-9026 chr3 21478069 21478279 + 5.77 0.000 intron (NM_024697, intron 4 of 7) L2a|LINE|L2 -64615 NR_046731 100874216 Hs.661720 NR_046731 ENSG00000225542 ZNF385D-AS1 - ZNF385D antisense RNA 1 ncRNA chr11-8458 chr11 115942672 115942882 + 5.77 0.000 Intergenic Intergenic -182577 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr22-3199 chr22 37237297 37237507 + 5.77 0.000 intron (NM_002872, intron 2 of 6) intron (NM_002872, intron 2 of 6) 6867 NM_002872 5880 Hs.517601 NM_002872 ENSG00000128340 RAC2 EN-7|Gx|HSPC022|p21-Rac2 Rac family small GTPase 2 protein-coding chr3-7645 chr3 30933748 30933958 + 5.77 0.000 Intergenic Intergenic -39192 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr2-13196 chr2 121257304 121257514 + 5.77 0.000 intron (NM_014553, intron 2 of 14) intron (NM_014553, intron 2 of 14) 27793 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr11-6127 chr11 39348340 39348550 + 5.77 0.000 Intergenic MLT1E|LTR|ERVL-MaLR 699587 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr3-5432 chr3 171695712 171695922 + 5.77 0.000 intron (NM_002662, intron 12 of 26) intron (NM_002662, intron 12 of 26) 114666 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr2-11529 chr2 239200774 239200984 + 5.77 0.000 intron (NM_006037, intron 3 of 26) intron (NM_006037, intron 3 of 26) -5422 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr18-3577 chr18 79530022 79530232 + 5.77 0.000 TTS (NM_172387) TTS (NM_172387) -49155 NR_148949 284240 Hs.448912 NR_148949 LOC284240 - uncharacterized LOC284240 ncRNA chr11-10253 chr11 101577621 101577831 + 5.77 0.000 intron (NM_004621, intron 1 of 12) intron (NM_004621, intron 1 of 12) 6281 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr17-6019 chr17 78397709 78397919 + 5.77 0.000 intron (NR_111989, intron 2 of 8) intron (NR_111989, intron 2 of 8) 19165 NR_110601 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr2-4786 chr2 37103718 37103928 + 5.77 0.000 3' UTR (NM_001135651, exon 17 of 17) 3' UTR (NM_001135651, exon 17 of 17) 19372 NM_001278505 253635 Hs.595250 NM_174931 ENSG00000152133 GPATCH11 CCDC75|CENP-Y|CENPY G-patch domain containing 11 protein-coding chr7-6230 chr7 131869884 131870094 + 5.77 0.000 Intergenic L2a|LINE|L2 -40231 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr19-4814 chr19 35391915 35392125 + 5.77 0.000 Intergenic L2a|LINE|L2 -13587 NR_040046 100128682 Hs.570008 NR_040046 ENSG00000205786 LINC01531 - long intergenic non-protein coding RNA 1531 ncRNA chr1-14281 chr1 37644141 37644351 + 5.77 0.000 Intergenic MIRb|SINE|MIR -9354 NM_001242910 284654 Hs.135015 NM_173640 ENSG00000169218 RSPO1 CRISTIN3|RSPO R-spondin 1 protein-coding chr7-4042 chr7 486303 486513 + 5.77 0.000 Intergenic Intergenic 33436 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr1-13203 chr1 208595950 208596160 + 5.77 0.000 Intergenic Intergenic -132633 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr5-7956 chr5 80754088 80754298 + 5.77 0.000 intron (NM_002439, intron 12 of 23) L1ME4b|LINE|L1 -99210 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr14-4955 chr14 74552978 74553188 + 5.77 0.000 intron (NM_000428, intron 4 of 35) intron (NM_000428, intron 4 of 35) 59154 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr2-9613 chr2 409742 409952 + 5.77 0.000 Intergenic Intergenic 82808 NR_146437 727944 NR_146436 ENSG00000223985 LINC01874 - long intergenic non-protein coding RNA 1874 ncRNA chr2-9105 chr2 205714648 205714858 + 5.77 0.000 intron (NM_018534, intron 2 of 15) intron (NM_018534, intron 2 of 15) 32252 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr1-16176 chr1 206600444 206600654 + 5.77 0.000 intron (NM_001201478, intron 5 of 12) MER3|DNA|hAT-Charlie 11916 NM_006893 1939 Hs.497581 NM_006893 ENSG00000143486 EIF2D HCA56|LGTN eukaryotic translation initiation factor 2D protein-coding chr7-9545 chr7 140538060 140538270 + 5.77 0.000 intron (NM_001318052, intron 13 of 18) intron (NM_001318052, intron 13 of 18) -58596 NM_001145125 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chr8-6727 chr8 87145801 87146011 + 5.77 0.000 intron (NM_173538, intron 4 of 10) intron (NM_173538, intron 4 of 10) 279491 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr15-3940 chr15 40543603 40543813 + 5.77 0.000 intron (NM_001289132, intron 3 of 3) AluSx4|SINE|Alu -11158 NR_002208 359821 Hs.678598 NR_002208 MRPL42P5 - mitochondrial ribosomal protein L42 pseudogene 5 pseudo chr8-2519 chr8 22176815 22177025 + 5.77 0.000 intron (NM_006129, intron 4 of 19) intron (NM_006129, intron 4 of 19) 11548 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr18-3358 chr18 58069413 58069623 + 5.77 0.000 intron (NM_001144964, intron 1 of 30) intron (NM_001144964, intron 1 of 30) 22292 NM_001144964 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr22-2032 chr22 39891360 39891570 + 5.77 0.000 intron (NM_152512, intron 1 of 6) intron (NM_152512, intron 1 of 6) 2295 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr7-6800 chr7 29333844 29334054 + 5.77 0.000 intron (NM_001293070, intron 2 of 13) intron (NM_001293070, intron 2 of 13) -124979 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr11-7911 chr11 134576892 134577102 + 5.77 0.000 Intergenic Intergenic 140515 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA chr22-3547 chr22 16959232 16959442 + 5.77 0.000 Intergenic Intergenic 48885 NM_001366857 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2 associated binding protein family member 4 protein-coding chr15-3282 chr15 77602456 77602666 + 5.77 0.000 Intergenic Intergenic 30351 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr17-8233 chr17 65135118 65135328 + 5.77 0.000 Intergenic MIR3|SINE|MIR -2115 NM_001165933 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding GL000224.1-5 GL000224.1 20273 20483 + 5.77 0.000 NA NA NA NA chr16-5207 chr16 20077899 20078109 + 5.77 0.000 Intergenic AluSq2|SINE|Alu -4226 NM_001318483 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr11-7620 chr11 47947238 47947448 + 5.77 0.000 Intergenic Intergenic -33216 NM_002843 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr4-8410 chr4 152114462 152114672 + 5.77 0.000 Intergenic L2a|LINE|L2 13749 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr10-5949 chr10 122137789 122137999 + 5.77 0.000 intron (NM_001291876, intron 6 of 19) intron (NM_001291876, intron 6 of 19) 25009 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr3-9994 chr3 99657561 99657771 + 5.77 0.000 intron (NM_020351, intron 1 of 3) intron (NM_020351, intron 1 of 3) 19072 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr2-8878 chr2 176960098 176960308 + 5.77 0.000 Intergenic Intergenic 252208 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr6-6503 chr6 119052525 119052735 + 5.77 0.000 intron (NM_001288576, intron 1 of 15) L2|LINE|L2 16513 NR_030315 693128 NR_030315 ENSG00000207982 MIR548B MIRN548B microRNA 548b ncRNA chr2-10816 chr2 50884568 50884778 + 5.77 0.000 intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) 147459 NM_001330078 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chrX-4616 chrX 75356988 75357198 + 5.77 0.000 Intergenic L1MEc|LINE|L1 83008 NM_145052 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chr1-14920 chr1 84960382 84960592 + 5.77 0.000 intron (NM_153259, intron 2 of 13) intron (NM_153259, intron 2 of 13) 36626 NM_001330647 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr9-7876 chr9 87556210 87556420 + 5.77 0.000 intron (NM_004938, intron 2 of 25) MIR|SINE|MIR 2861 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr11-8472 chr11 117511253 117511463 + 5.77 0.000 intron (NM_020693, intron 8 of 32) intron (NM_020693, intron 8 of 32) 183504 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr6-6940 chr6 16040248 16040458 + 5.77 0.000 Intergenic LTR12C|LTR|ERV1 -88733 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr17-5268 chr17 19830389 19830599 + 5.77 0.000 intron (NM_014683, intron 10 of 26) AluJr|SINE|Alu 37442 NM_001142610 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr12-6296 chr12 50729313 50729523 + 5.77 0.000 intron (NM_173602, intron 30 of 37) MER5B|DNA|hAT-Charlie -34683 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr4-8286 chr4 142460305 142460515 + 5.77 0.000 intron (NM_001331040, intron 3 of 25) intron (NM_001331040, intron 3 of 25) 386125 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr22-3216 chr22 39359802 39360012 + 5.77 0.000 intron (NM_145731, intron 1 of 3) L2c|LINE|L2 -4263 NM_145738 9145 Hs.216226 NM_004711 ENSG00000100321 SYNGR1 - synaptogyrin 1 protein-coding chr6-7526 chr6 68127011 68127221 + 5.77 0.000 Intergenic L1PA12|LINE|L1 71765 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr17-7274 chr17 3397932 3398142 + 5.77 0.000 exon (NM_003553, exon 1 of 1) exon (NM_003553, exon 1 of 1) 373 NM_003553 8387 NM_003553 ENSG00000180016 OR1E1 HGM071|OR13-66|OR17-2|OR17-32|OR1E5|OR1E6|OR1E8P|OR1E9P|OST547 olfactory receptor family 1 subfamily E member 1 protein-coding chr11-7417 chr11 101236124 101236334 + 5.77 0.000 Intergenic HERV9-int|LTR|ERV1 -106416 NM_000926 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr3-7804 chr3 95982745 95982955 + 5.77 0.000 Intergenic Intergenic -299657 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr5-6696 chr5 64375448 64375658 + 5.77 0.000 Intergenic ERVL-E-int|LTR|ERVL -130462 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chrX-2867 chrX 143385517 143385727 + 5.77 0.000 Intergenic AluSq10|SINE|Alu 131853 NM_001009609 139067 Hs.447320 NM_001009609 ENSG00000189252 SPANXN3 CT11.8|SPANX-N3 SPANX family member N3 protein-coding chr10-3079 chr10 6894403 6894613 + 5.77 0.000 Intergenic Intergenic 114910 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr4-5093 chr4 147578033 147578243 + 5.77 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -39259 NM_018241 55751 Hs.203896 NM_018241 ENSG00000164168 TMEM184C TMEM34 transmembrane protein 184C protein-coding chr11-10573 chr11 122618140 122618350 + 5.77 0.000 Intergenic Intergenic -37477 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr2-14543 chr2 230319459 230319669 + 5.77 0.000 Intergenic Intergenic -7607 NM_001308162 93349 Hs.589661 NM_138402 ENSG00000185404 SP140L - SP140 nuclear body protein like protein-coding chr8-6313 chr8 46204976 46205186 + 5.77 0.000 Intergenic GSAT|Satellite|centr 412562 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chrX-4618 chrX 75472377 75472587 + 5.77 0.000 intron (NM_001146256, intron 2 of 10) HERVL-int|LTR|ERVL 50555 NM_144969 158866 Hs.253211 NM_144969 ENSG00000102383 ZDHHC15 DHHC15|MRX91 zinc finger DHHC-type containing 15 protein-coding chr12-8350 chr12 131855765 131855975 + 5.77 0.000 Intergenic Intergenic 27477 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr2-6856 chr2 73561270 73561480 + 5.77 0.000 intron (NM_015120, intron 15 of 22) LTR76|LTR|ERV1 81047 NM_003960 9027 Hs.14637 NM_003960 ENSG00000144035 NAT8 ATase2|CCNAT|CML1|GLA|Hcml1|TSC501|TSC510 N-acetyltransferase 8 (putative) protein-coding chr11-8349 chr11 79274484 79274694 + 5.77 0.000 intron (NM_001098816, intron 2 of 33) intron (NM_001098816, intron 2 of 33) 127520 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr11-5534 chr11 93306847 93307057 + 5.77 0.000 Intergenic L1PA12|LINE|L1 -23765 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr20-2267 chr20 3221790 3222000 + 5.77 0.000 non-coding (NR_052000, exon 6 of 7) non-coding (NR_052000, exon 6 of 7) 12397 NM_181493 3704 Hs.415299 NM_033453 ENSG00000125877 ITPA C20orf37|HLC14-06-P|ITPase|My049|NTPase|dJ794I6.3 inosine triphosphatase protein-coding chr9-7022 chr9 118780423 118780633 + 5.77 0.000 Intergenic MLT1E|LTR|ERVL-MaLR 100857 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr11-10603 chr11 124230507 124230717 + 5.77 0.000 Intergenic L3|LINE|CR1 5973 NM_001291438 26492 Hs.381319 NM_001291438 OR8G2P HSTPCR120|OR8G2|OR8G4|ORL206|ORL486|TPCR120 olfactory receptor family 8 subfamily G member 2 pseudogene protein-coding chr10-4871 chr10 16545235 16545445 + 5.77 0.000 Intergenic Intergenic -23461 NM_001010908 389941 Hs.676792 NM_001010908 ENSG00000165985 C1QL3 C1QTNF13|C1ql|CTRP13|K100 complement C1q like 3 protein-coding chr12-6989 chr12 30329559 30329769 + 5.77 0.000 Intergenic ERVL-B4-int|LTR|ERVL 347580 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr1-15288 chr1 116221686 116221896 + 5.77 0.000 Intergenic Intergenic 110036 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr10-5687 chr10 99888720 99888930 + 5.77 0.000 exon (NM_001318326, exon 9 of 14) exon (NM_001318326, exon 9 of 14) 25267 NM_001318327 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr9-7723 chr9 73543718 73543928 + 5.77 0.000 Intergenic L2c|LINE|L2 391958 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr19-6497 chr19 17967425 17967635 + 5.77 0.000 intron (NM_002248, intron 2 of 10) intron (NM_002248, intron 2 of 10) 16228 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr19-6151 chr19 4288150 4288360 + 5.77 0.000 exon (NM_020209, exon 5 of 6) exon (NM_020209, exon 5 of 6) 9654 NM_020209 56961 Hs.7423 NM_020209 ENSG00000105251 SHD - Src homology 2 domain containing transforming protein D protein-coding KI270442.1-15 KI270442.1 84021 84231 + 5.77 0.000 NA NA NA NA chr4-2440 chr4 153101808 153102018 + 5.77 0.000 Intergenic L1PB1|LINE|L1 -50421 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr1-16311 chr1 216447985 216448195 + 5.77 0.000 Intergenic Intergenic -24642 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr18-1859 chr18 24959050 24959260 + 5.77 0.000 intron (NR_146903, intron 1 of 1) OldhAT1|DNA|hAT-Ac 28824 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr5-7899 chr5 75435272 75435482 + 5.77 0.000 intron (NM_031361, intron 3 of 16) L1PA15|LINE|L1 76252 NM_031361 10087 Hs.270437 NM_005713 ENSG00000113163 CERT1 CERT|CERTL|COL4A3BP|GPBP|MRD34|STARD11 ceramide transporter 1 protein-coding chr3-6217 chr3 64595390 64595600 + 5.77 0.000 intron (NM_001318781, intron 26 of 38) intron (NM_001318781, intron 26 of 38) 34149 NR_110150 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr8-5418 chr8 30840976 30841186 + 5.77 0.000 intron (NM_001350162, intron 8 of 10) AluSz|SINE|Alu -28263 NM_001009552 5516 Hs.491440 NM_004156 ENSG00000104695 PPP2CB PP2Abeta|PP2CB protein phosphatase 2 catalytic subunit beta protein-coding chr11-9237 chr11 41681438 41681648 + 5.77 0.000 Intergenic Intergenic -33025 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA chr16-5038 chr16 58050038 58050248 + 5.77 0.000 Intergenic Intergenic 24389 NM_002428 4324 Hs.80343 NM_002428 ENSG00000102996 MMP15 MMP-15|MT2-MMP|MT2MMP|MTMMP2|SMCP-2 matrix metallopeptidase 15 protein-coding chr7-4804 chr7 93553321 93553531 + 5.77 0.000 intron (NM_001164737, intron 2 of 15) intron (NM_001164737, intron 2 of 15) 6384 NM_001164738 799 Hs.489127 NM_001742 ENSG00000004948 CALCR CRT|CT-R|CTR|CTR1 calcitonin receptor protein-coding chr17-5354 chr17 29710853 29711063 + 5.77 0.000 intron (NM_033389, intron 2 of 14) intron (NM_033389, intron 2 of 14) 50474 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr2-6758 chr2 40849899 40850109 + 5.77 0.000 Intergenic AluSz6|SINE|Alu -337569 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr6-7841 chr6 104566422 104566632 + 5.77 0.000 Intergenic Intergenic 293019 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr12-4712 chr12 49880536 49880746 + 5.77 0.000 intron (NM_012306, intron 11 of 11) intron (NM_012306, intron 11 of 11) 23259 NM_012306 23017 Hs.567424 NM_012306 ENSG00000135472 FAIM2 LFG|LFG2|NGP35|NMP35|TMBIM2 Fas apoptotic inhibitory molecule 2 protein-coding chr1-12998 chr1 157430714 157430924 + 5.77 0.000 Intergenic HERVL66-int|LTR|ERVL 121696 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr15-4898 chr15 76967158 76967368 + 5.77 0.000 Intergenic Intergenic -27417 NM_001321137 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chr11-8471 chr11 117508768 117508978 + 5.77 0.000 intron (NM_020693, intron 8 of 32) intron (NM_020693, intron 8 of 32) 181019 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr16-5005 chr16 27634661 27634871 + 5.77 0.000 intron (NM_015202, intron 5 of 27) LTR67B|LTR|ERVL 84263 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr5-6659 chr5 55227600 55227810 + 5.77 0.000 promoter-TSS (NM_001190787) promoter-TSS (NM_001190787) -390 NM_001190787 345643 Hs.394578 NM_001190787 ENSG00000234602 MCIDAS IDAS|MCI|MCIN multiciliate differentiation and DNA synthesis associated cell cycle protein protein-coding chr5-4350 chr5 168125093 168125303 + 5.77 0.000 intron (NM_001368145, intron 10 of 26) intron (NM_001368145, intron 10 of 26) -40647 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr11-4131 chr11 44110300 44110510 + 5.77 0.000 intron (NM_207122, intron 3 of 13) intron (NM_207122, intron 3 of 13) 14208 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr14-4912 chr14 73452691 73452901 + 5.77 0.000 intron (NM_001005743, intron 1 of 12) intron (NM_001005743, intron 1 of 12) 5784 NM_001005744 8650 Hs.525443 NM_003744 ENSG00000133961 NUMB C14orf41|S171|c14_5527 NUMB endocytic adaptor protein protein-coding chr6-2613 chr6 127484393 127484603 + 5.77 0.000 intron (NM_001012279, intron 4 of 11) intron (NM_001012279, intron 4 of 11) -25109 NM_014702 9729 Hs.319247 NM_014702 ENSG00000189367 KIAA0408 - KIAA0408 protein-coding chr7-8889 chr7 92033533 92033743 + 5.77 0.000 intron (NM_147185, intron 16 of 49) AluJr|SINE|Alu 92763 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr12-7184 chr12 49483753 49483963 + 5.77 0.000 intron (NM_001293285, intron 4 of 14) MER5A1|DNA|hAT-Charlie -55172 NM_001314030 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr9-6451 chr9 84710681 84710891 + 5.77 0.000 exon (NM_001369552, exon 3 of 10) exon (NM_001369552, exon 3 of 10) 4885 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr19-6774 chr19 40762801 40763011 + 5.77 0.000 exon (NM_004596, exon 4 of 6) exon (NM_004596, exon 4 of 6) 11703 NM_004596 6626 Hs.466775 NM_004596 ENSG00000077312 SNRPA Mud1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding chrX-3177 chrX 37308563 37308773 + 5.77 0.000 Intergenic AluY|SINE|Alu -40662 NM_001173490 5638 Hs.190341 NM_000950 ENSG00000130962 PRRG1 PRGP1 proline rich and Gla domain 1 protein-coding chr6-8454 chr6 154117497 154117707 + 5.77 0.000 intron (NR_104348, intron 4 of 4) intron (NR_104348, intron 4 of 4) 27840 NM_001285528 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr11-7245 chr11 11227786 11227996 + 5.77 0.000 Intergenic MamRep1894|DNA|hAT 125359 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr1-6939 chr1 155127010 155127220 + 5.77 0.000 promoter-TSS (NM_004428) promoter-TSS (NM_004428) -761 NM_182685 1942 Hs.516664 NM_004428 ENSG00000169242 EFNA1 B61|ECKLG|EFL1|EPLG1|LERK-1|LERK1|TNFAIP4 ephrin A1 protein-coding chr10-7091 chr10 93262243 93262453 + 5.77 0.000 Intergenic Intergenic 188455 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr12-7062 chr12 41274820 41275030 + 5.77 0.000 intron (NM_001164595, intron 3 of 9) L3|LINE|CR1 86605 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr19-5079 chr19 51713876 51714086 + 5.77 0.000 exon (NM_001523, exon 5 of 5) exon (NM_001523, exon 5 of 5) 10010 NM_001297436 3036 Hs.57697 NM_001523 ENSG00000105509 HAS1 HAS hyaluronan synthase 1 protein-coding chr2-8448 chr2 121230302 121230512 + 5.77 0.000 intron (NM_014553, intron 13 of 14) AluSp|SINE|Alu 54795 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr3-6135 chr3 55585883 55586093 + 5.77 0.000 intron (NM_015576, intron 16 of 16) intron (NM_015576, intron 16 of 16) 73481 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA chr10-7868 chr10 48185965 48186175 + 5.77 0.000 intron (NM_001018071, intron 17 of 28) intron (NM_001018071, intron 17 of 28) -10927 NM_001042512 143162 Hs.664786 NM_152428 ENSG00000170324 FRMPD2 PDZD5C|PDZK4|PDZK5C FERM and PDZ domain containing 2 protein-coding chr20-2824 chr20 59403002 59403212 + 5.77 0.000 Intergenic Intergenic 102496 NM_001302455 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding chrX-4894 chrX 107334223 107334433 + 5.77 0.000 Intergenic THE1D|LTR|ERVL-MaLR 127696 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr10-8358 chr10 80300961 80301171 + 5.77 0.000 Intergenic AluJr|SINE|Alu -11408 NM_000429 4143 Hs.282670 NM_000429 ENSG00000151224 MAT1A MAT|MATA1|SAMS|SAMS1 methionine adenosyltransferase 1A protein-coding chr2-13467 chr2 146539383 146539593 + 5.77 0.000 Intergenic Intergenic -47569 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-10727 chr2 30346793 30347003 + 5.77 0.000 non-coding (NR_122048, exon 1 of 2) non-coding (NR_122048, exon 1 of 2) 252 NR_122048 285043 Hs.429119 NR_122048 LINC01936 - long intergenic non-protein coding RNA 1936 ncRNA chr12-6507 chr12 107399152 107399362 + 5.77 0.000 intron (NM_001347944, intron 1 of 14) intron (NM_001347944, intron 1 of 14) 78669 NM_001347944 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr3-9719 chr3 66858482 66858692 + 5.77 0.000 Intergenic LTR1A1|LTR|ERV1 -120251 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr2-11137 chr2 139970999 139971209 + 5.77 0.000 Intergenic L1MA4A|LINE|L1 615581 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr1-15549 chr1 158034100 158034310 + 5.77 0.000 intron (NM_001286349, intron 1 of 12) AluYk4|SINE|Alu 8655 NR_145471 100505785 Hs.664656 NR_145471 KIRREL1-IT1 KIRREL-IT1 KIRREL1 intronic transcript 1 ncRNA chr4-8340 chr4 146902427 146902637 + 5.77 0.000 intron (NR_133922, intron 6 of 13) intron (NR_133922, intron 6 of 13) 43332 NR_133922 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chrX-1481 chrX 133450234 133450444 + 5.77 0.000 Intergenic MER57B1|LTR|ERV1 -34850 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr3-5595 chr3 8532458 8532668 + 5.77 0.000 intron (NM_001278233, intron 1 of 4) intron (NM_001278233, intron 1 of 4) 30740 NM_001278233 29995 Hs.475353 NM_014583 ENSG00000071282 LMCD1 - LIM and cysteine rich domains 1 protein-coding chr2-11448 chr2 226674388 226674598 + 5.77 0.000 Intergenic Intergenic -15700 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr6-7489 chr6 62311913 62312123 + 5.77 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -25791 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr16-6814 chr16 80610764 80610974 + 5.77 0.000 intron (NM_152342, intron 5 of 6) intron (NM_152342, intron 5 of 6) -38061 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr4-3661 chr4 27642632 27642842 + 5.77 0.000 Intergenic Intergenic 425258 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr1-13299 chr1 233460654 233460864 + 5.77 0.000 Intergenic Intergenic 133035 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr19-5460 chr19 34039452 34039662 + 5.77 0.000 Intergenic Intergenic -132947 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chrX-2298 chrX 53209052 53209262 + 5.77 0.000 intron (NR_148673, intron 12 of 26) intron (NR_148673, intron 12 of 26) -10212 NR_106954 102466759 NR_106954 ENSG00000277474 MIR6894 hsa-mir-6894 microRNA 6894 ncRNA chr11-3614 chr11 70111998 70112208 + 5.77 0.000 intron (NM_018043, intron 7 of 25) intron (NM_018043, intron 7 of 25) 26693 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr5-6197 chr5 63131675 63131885 + 5.77 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 552961 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr4-7921 chr4 107593905 107594115 + 5.77 0.000 Intergenic Tigger4|DNA|TcMar-Tigger 126224 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr10-3370 chr10 21350211 21350421 + 5.77 0.000 intron (NR_155751, intron 4 of 4) intron (NR_155751, intron 4 of 4) 22634 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr5-8177 chr5 104747058 104747268 + 5.77 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -352311 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr11-9765 chr11 69310938 69311148 + 5.77 0.000 Intergenic Intergenic 16888 NM_001293294 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chrX-4188 chrX 34813730 34813940 + 5.77 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -128961 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr20-2243 chr20 910697 910907 + 5.77 0.000 intron (NM_015985, intron 1 of 8) intron (NM_015985, intron 1 of 8) 5532 NM_015985 51378 Hs.278973 NM_015985 ENSG00000101280 ANGPT4 ANG3|ANG4 angiopoietin 4 protein-coding chr5-7857 chr5 72531655 72531865 + 5.77 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -24350 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr6-6122 chr6 158663865 158664075 + 5.77 0.000 intron (NM_001318745, intron 1 of 14) intron (NM_001318745, intron 1 of 14) 567 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr1-6386 chr1 9875353 9875563 + 5.77 0.000 intron (NM_020248, intron 3 of 5) intron (NM_020248, intron 3 of 5) 34811 NM_001012329 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr18-3199 chr18 46320849 46321059 + 5.77 0.000 Intergenic L2c|LINE|L2 -13064 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr8-4612 chr8 131705965 131706175 + 5.77 0.000 Intergenic Intergenic -198023 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr9-7245 chr9 3646193 3646403 + 5.77 0.000 Intergenic Intergenic -21788 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA chr7-9441 chr7 134347831 134348041 + 5.77 0.000 Intergenic Intergenic -31006 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr2-12068 chr2 31778041 31778251 + 5.77 0.000 Intergenic L1PREC2|LINE|L1 25834 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA chr3-8449 chr3 120390567 120390777 + 5.77 0.000 Intergenic Intergenic 5057 NR_029584 406975 NR_029584 ENSG00000284121 MIR198 MIRN198|miR-198 microRNA 198 ncRNA chr11-5594 chr11 111526529 111526739 + 5.77 0.000 intron (NM_207430, intron 4 of 6) L2b|LINE|L2 11849 NM_001100388 399949 Hs.411600 NM_207430 ENSG00000183644 C11orf88 - chromosome 11 open reading frame 88 protein-coding chr2-6775 chr2 45568342 45568552 + 5.77 0.000 intron (NM_018079, intron 9 of 20) intron (NM_018079, intron 9 of 20) 42820 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr4-5301 chr4 177926744 177926954 + 5.77 0.000 intron (NR_028342, intron 2 of 5) intron (NR_028342, intron 2 of 5) -18913 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr11-5876 chr11 11141238 11141448 + 5.77 0.000 Intergenic Intergenic 211907 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr2-12204 chr2 42395231 42395441 + 5.77 0.000 Intergenic HAL1|LINE|L1 -26379 NM_001319037 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr1-11418 chr1 60664343 60664553 + 5.77 0.000 intron (NR_110628, intron 4 of 5) intron (NR_110628, intron 4 of 5) -41763 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr5-4034 chr5 37810198 37810408 + 5.77 0.000 Intergenic Intergenic 24519 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr8-5774 chr8 142415323 142415533 + 5.77 0.000 Intergenic Intergenic -12246 NM_001366902 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr10-7027 chr10 78735203 78735413 + 5.77 0.000 Intergenic Intergenic 332140 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr7-9400 chr7 131459404 131459614 + 5.77 0.000 intron (NM_001321316, intron 12 of 17) MER39|LTR|ERV1 97119 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr14-1738 chr14 60517281 60517491 + 5.77 0.000 Intergenic Intergenic 8240 NM_007374 4990 Hs.194756 NM_007374 ENSG00000184302 SIX6 MCOPCT2|ODRMD|OPTX2|Six9 SIX homeobox 6 protein-coding chr11-7068 chr11 120888085 120888295 + 5.77 0.000 intron (NM_001282470, intron 10 of 19) intron (NM_001282470, intron 10 of 19) 6607 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr6-6286 chr6 37518323 37518533 + 5.77 0.000 intron (NR_126057, intron 1 of 3) MIR|SINE|MIR 11080 NR_126057 100505530 Hs.582978 NM_001039791 LINC02520 - long intergenic non-protein coding RNA 2520 ncRNA chrX-2892 chrX 149029821 149030031 + 5.77 0.000 Intergenic AluSz|SINE|Alu 310835 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr14-4121 chr14 70277148 70277358 + 5.77 0.000 Intergenic L1ME3E|LINE|L1 -29452 NR_003951 145241 Hs.712468 NR_003951 ENSG00000235812 ADAM21P1 ADAM21P ADAM metallopeptidase domain 21 pseudogene 1 pseudo chr8-6358 chr8 52722285 52722495 + 5.77 0.000 Intergenic AluJb|SINE|Alu -7924 NM_001083617 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr9-5243 chr9 78090828 78091038 + 5.77 0.000 Intergenic Intergenic -59122 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr1-11540 chr1 167455954 167456164 + 5.77 0.000 intron (NM_000734, intron 1 of 7) intron (NM_000734, intron 1 of 7) 62470 NM_000734 919 Hs.156445 NM_000734 ENSG00000198821 CD247 CD3-ZETA|CD3H|CD3Q|CD3Z|IMD25|T3Z|TCRZ CD247 molecule protein-coding chr3-4842 chr3 150521700 150521910 + 5.77 0.000 Intergenic Intergenic 24691 NM_014445 27230 Hs.518326 NM_014445 ENSG00000120742 SERP1 RAMP4 stress associated endoplasmic reticulum protein 1 protein-coding chr8-7180 chr8 124110423 124110633 + 5.77 0.000 intron (NM_001039112, intron 39 of 40) intron (NM_001039112, intron 39 of 40) 60994 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr4-7164 chr4 39489178 39489388 + 5.77 0.000 Intergenic HERV3-int|LTR|ERV1 9028 NR_026854 401127 Hs.383197 NR_026854 ENSG00000224097 LOC401127 - WD repeat domain 5 pseudogene pseudo chr8-5431 chr8 35204196 35204406 + 5.77 0.000 Intergenic MER52A|LTR|ERV1 -31174 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr4-6186 chr4 44446310 44446520 + 5.77 0.000 intron (NM_198353, intron 1 of 1) intron (NM_198353, intron 1 of 1) 2394 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chrX-3998 chrX 15815951 15816161 + 5.77 0.000 intron (NM_005089, intron 8 of 10) intron (NM_005089, intron 8 of 10) 25605 NM_005089 8233 Hs.171909 NM_005089 ENSG00000169249 ZRSR2 U2AF1-RS2|U2AF1L2|U2AF1RS2|URP|ZC3H22 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 protein-coding chr1-13548 chr1 7041122 7041332 + 5.77 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 255773 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr2-14461 chr2 223850387 223850597 + 5.77 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -12910 NR_110906 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr12-3221 chr12 56408255 56408465 + 5.77 0.000 Intergenic AluY|SINE|Alu 41066 NM_001330295 8914 Hs.118631 NM_003920 ENSG00000111602 TIMELESS TIM|TIM1|hTIM timeless circadian regulator protein-coding chr14-4370 chr14 26205189 26205399 + 5.77 0.000 Intergenic Intergenic 348136 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr8-3234 chr8 140052649 140052859 + 5.77 0.000 intron (NM_001160372, intron 17 of 22) AluSz|SINE|Alu 47781 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr14-5033 chr14 79404690 79404900 + 5.77 0.000 intron (NM_001105250, intron 1 of 6) intron (NM_001105250, intron 1 of 6) 125415 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr6-6509 chr6 120387246 120387456 + 5.77 0.000 Intergenic Intergenic 372172 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr2-10968 chr2 88333122 88333332 + 5.77 0.000 Intergenic L2|LINE|L2 119466 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr1-15122 chr1 102174393 102174603 + 5.77 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -177264 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr2-6463 chr2 161063753 161063963 + 5.77 0.000 Intergenic Intergenic -73097 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr19-6769 chr19 40561166 40561376 + 5.77 0.000 TTS (NM_025213) TTS (NM_025213) -15602 NM_138392 92799 Hs.26506 NM_138392 ENSG00000160410 SHKBP1 PP203|Sb1 SH3KBP1 binding protein 1 protein-coding chr4-8551 chr4 165580316 165580526 + 5.77 0.000 Intergenic Intergenic -104218 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr1-16513 chr1 230322589 230322799 + 5.77 0.000 3' UTR (NM_001258311, exon 7 of 7) 3' UTR (NM_001258311, exon 7 of 7) 103638 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr2-9166 chr2 212777117 212777327 + 5.77 0.000 Intergenic Intergenic -18109 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr6-6206 chr6 15463228 15463438 + 5.77 0.000 intron (NM_004973, intron 4 of 17) intron (NM_004973, intron 4 of 17) 199695 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr11-6140 chr11 41065222 41065432 + 5.77 0.000 intron (NM_001258419, intron 1 of 6) L1PA8|LINE|L1 394309 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr9-3313 chr9 87868474 87868684 + 5.77 0.000 intron (NR_149022, intron 3 of 3) intron (NR_149022, intron 3 of 3) -9523 NR_040117 392364 Hs.689633 NR_040117 LOC392364 - nuclear pore associated protein 1 pseudogene pseudo chr6-4230 chr6 5466355 5466565 + 5.77 0.000 intron (NM_006567, intron 4 of 6) L2c|LINE|L2 -8385 NR_125847 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA chr1-10666 chr1 183996695 183996905 + 5.77 0.000 intron (NM_001303421, intron 1 of 11) intron (NM_001303421, intron 1 of 11) 40928 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr2-9929 chr2 238712884 238713094 + 5.77 0.000 Intergenic Intergenic 134918 NR_157851 100287387 Hs.516864 NR_157851 LOC100287387 - uncharacterized LOC100287387 ncRNA chr19-5669 chr19 8146778 8146988 + 5.77 0.000 intron (NM_032447, intron 3 of 63) GA-rich|Low_complexity|Low_complexity 1986 NM_001321431 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr10-8913 chr10 115337201 115337411 + 5.77 0.000 intron (NM_207303, intron 19 of 28) L1MA1|LINE|L1 243941 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr20-4086 chr20 39538051 39538261 + 5.77 0.000 Intergenic Intergenic -313408 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr11-10746 chr11 133413156 133413366 + 5.77 0.000 intron (NM_001012393, intron 1 of 7) L1PA2|LINE|L1 119240 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr4-5817 chr4 96888210 96888420 + 5.77 0.000 Intergenic Intergenic -478611 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr21-1283 chr21 36593469 36593679 + 5.77 0.000 Intergenic MLT2C2|LTR|ERVL -17005 NM_001146077 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr2-10438 chr2 204066333 204066543 + 5.77 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 129690 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chrX-4078 chrX 22060289 22060499 + 5.77 0.000 intron (NM_001282754, intron 3 of 20) intron (NM_001282754, intron 3 of 20) 28069 NM_000444 5251 Hs.495834 NM_000444 ENSG00000102174 PHEX HPDR|HPDR1|HYP|HYP1|LXHR|PEX|XLH phosphate regulating endopeptidase homolog X-linked protein-coding chr17-7073 chr17 65861707 65861917 + 5.77 0.000 intron (NM_001353129, intron 20 of 26) L1ME3F|LINE|L1 -35269 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr18-1031 chr18 79903878 79904088 + 5.77 0.000 exon (NM_001146345, exon 5 of 5) exon (NM_001146345, exon 5 of 5) 40315 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr17-5752 chr17 59699907 59700117 + 5.77 0.000 5' UTR (NM_001015509, exon 2 of 3) 5' UTR (NM_001015509, exon 2 of 3) 7586 NM_001015509 51651 Hs.12677 NM_016077 ENSG00000141378 PTRH2 BIT1|CFAP37|CGI-147|IMNEPD|PTH|PTH 2|PTH2 peptidyl-tRNA hydrolase 2 protein-coding chr14-4230 chr14 99505494 99505704 + 5.77 0.000 3' UTR (NM_001144995, exon 6 of 6) 3' UTR (NM_001144995, exon 6 of 6) 24190 NM_001099402 8812 Hs.510409 NM_003858 ENSG00000090061 CCNK CPR4|IDDHDF cyclin K protein-coding chr2-4349 chr2 241080827 241081037 + 5.77 0.000 intron (NR_138463, intron 6 of 6) L1MC5a|LINE|L1 21355 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr9-7025 chr9 120143272 120143482 + 5.77 0.000 Intergenic Intergenic 101673 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr15-2344 chr15 34348237 34348447 + 5.77 0.000 exon (NM_001284293, exon 2 of 7) exon (NM_001284293, exon 2 of 7) 5027 NM_001284293 256646 Hs.525769 NM_175741 ENSG00000184507 NUTM1 C15orf55|FAM22H|NUT NUT midline carcinoma family member 1 protein-coding chr7-9500 chr7 137880615 137880825 + 5.77 0.000 intron (NM_001318246, intron 11 of 11) intron (NM_001318246, intron 11 of 11) -33856 NM_001321708 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr4-7130 chr4 36535669 36535879 + 5.77 0.000 intron (NR_149124, intron 3 of 4) intron (NR_149124, intron 3 of 4) 106126 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA chr6-7860 chr6 106087491 106087701 + 5.77 0.000 intron (NM_001198, intron 1 of 6) intron (NM_001198, intron 1 of 6) 1260 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr2-6601 chr2 235467785 235467995 + 5.77 0.000 Intergenic L1ME4b|LINE|L1 -26153 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr18-1620 chr18 47982816 47983026 + 5.77 0.000 Intergenic THE1D|LTR|ERVL-MaLR -51775 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr12-7648 chr12 82527274 82527484 + 5.77 0.000 Intergenic Intergenic -159527 NM_152588 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr6-5842 chr6 35151639 35151849 + 5.77 0.000 Intergenic Intergenic -10334 NM_001261818 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chrX-1364 chrX 149837754 149837964 + 5.77 0.000 intron (NR_109813, intron 1 of 2) L1MCb|LINE|L1 12151 NR_109813 101241891 Hs.744829 NR_109813 ENSG00000280752 LINC00850 KUCG1 long intergenic non-protein coding RNA 850 ncRNA chr20-1727 chr20 43799116 43799326 + 5.77 0.000 Intergenic Intergenic -72219 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr12-2971 chr12 110578209 110578419 + 5.77 0.000 intron (NR_138550, intron 1 of 4) intron (NR_138550, intron 1 of 4) 5004 NR_138550 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr5-8931 chr5 158040265 158040475 + 5.77 0.000 Intergenic Intergenic -181225 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr12-8158 chr12 121322901 121323111 + 5.77 0.000 intron (NM_001137559, intron 11 of 16) AluSx1|SINE|Alu -24698 NM_006549 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr7-6989 chr7 111362840 111363050 + 5.77 0.000 intron (NM_032549, intron 3 of 5) Charlie2a|DNA|hAT-Charlie 199346 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr1-9857 chr1 65042700 65042910 + 5.77 0.000 intron (NM_001321853, intron 2 of 26) L3|LINE|CR1 15037 NR_037443 100500854 NR_037443 ENSG00000265996 MIR3671 - microRNA 3671 ncRNA chr18-1462 chr18 51266622 51266832 + 5.77 0.000 Intergenic AluJb|SINE|Alu -69046 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr9-7544 chr9 34891556 34891766 + 5.77 0.000 intron (NM_001309426, intron 4 of 4) intron (NM_001309426, intron 4 of 4) 4103 NM_001309427 100129969 Hs.571602 NM_001309426 ENSG00000187791 FAM205C FAM205CP family with sequence similarity 205 member C protein-coding chr16-5805 chr16 48058 48268 + 5.77 0.000 intron (NM_016310, intron 2 of 2) AluSx3|SINE|Alu 5445 NM_016310 51728 Hs.632223 NM_016310 ENSG00000161980 POLR3K C11|C11-RNP3|My010|RPC10|RPC11|RPC12.5 RNA polymerase III subunit K protein-coding chr8-6323 chr8 48141668 48141878 + 5.77 0.000 Intergenic L2|LINE|L2 133342 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr16-5906 chr16 2697197 2697407 + 5.77 0.000 intron (NM_018992, intron 2 of 5) intron (NM_018992, intron 2 of 5) 14779 NM_018992 54442 Hs.61960 NM_018992 ENSG00000167977 KCTD5 - potassium channel tetramerization domain containing 5 protein-coding chr20-3226 chr20 61411569 61411779 + 5.77 0.000 intron (NM_001794, intron 2 of 15) intron (NM_001794, intron 2 of 15) -87747 NM_001252338 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr22-3128 chr22 20784120 20784330 + 5.77 0.000 exon (NM_000185, exon 3 of 5) exon (NM_000185, exon 3 of 5) 10112 NM_000185 3053 Hs.474270 NM_000185 ENSG00000099937 SERPIND1 D22S673|HC2|HCF2|HCII|HLS2|LS2|THPH10 serpin family D member 1 protein-coding chr17-8116 chr17 57629919 57630129 + 5.77 0.000 intron (NM_001322250, intron 10 of 13) intron (NM_001322250, intron 10 of 13) -21612 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA chr2-11321 chr2 199197440 199197650 + 5.77 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 260394 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr3-7417 chr3 108909046 108909256 + 5.77 0.000 intron (NM_005459, intron 3 of 3) intron (NM_005459, intron 3 of 3) 44695 NM_001363884 9626 Hs.233363 NM_005459 ENSG00000138472 GUCA1C GCAP3 guanylate cyclase activator 1C protein-coding chr12-8336 chr12 131096866 131097076 + 5.77 0.000 intron (NM_198827, intron 15 of 24) intron (NM_198827, intron 15 of 24) -68040 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA chr4-3615 chr4 8044140 8044350 + 5.77 0.000 intron (NM_001130084, intron 9 of 19) intron (NM_001130084, intron 9 of 19) 27743 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr10-8502 chr10 90330646 90330856 + 5.77 0.000 Intergenic MamRep137|DNA|TcMar-Tigger 210054 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr9-6014 chr9 135415698 135415908 + 5.77 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 56446 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr10-4465 chr10 76052965 76053175 + 5.77 0.000 intron (NM_001305581, intron 4 of 6) intron (NM_001305581, intron 4 of 6) 270309 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chrX-5322 chrX 145604411 145604621 + 5.77 0.000 Intergenic L1MA4|LINE|L1 -213313 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr18-2068 chr18 48142551 48142761 + 5.77 0.000 intron (NM_001371291, intron 4 of 6) intron (NM_001371291, intron 4 of 6) -5508 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr8-4471 chr8 117185254 117185464 + 5.77 0.000 Intergenic Intergenic 50364 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr13-1688 chr13 77276775 77276985 + 5.77 0.000 intron (NM_015057, intron 4 of 82) AluJr|SINE|Alu 50214 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr18-2884 chr18 10329085 10329295 + 5.77 0.000 Intergenic Intergenic 85180 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr7-4470 chr7 135321289 135321499 + 5.77 0.000 Intergenic PABL_B-int|LTR|ERV1 89415 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr3-8763 chr3 2876462 2876672 + 5.77 0.000 intron (NM_175607, intron 8 of 24) intron (NM_175607, intron 8 of 24) -15648 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr7-9483 chr7 136050604 136050814 + 5.77 0.000 Intergenic Intergenic -73350 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr10-3879 chr10 44892904 44893114 + 5.77 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -18307 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr12-7436 chr12 61463591 61463801 + 5.77 0.000 Intergenic MLT2A2|LTR|ERVL 729143 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr10-4166 chr10 92357743 92357953 + 5.77 0.000 Intergenic L1MA3|LINE|L1 -60813 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - microtubule affinity regulating kinase 2 pseudogene 9 pseudo chr6-6980 chr6 18806499 18806709 + 5.77 0.000 Intergenic L2|LINE|L2 234820 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chrX-4640 chrX 78665329 78665539 + 5.77 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -6106 NM_152694 203430 Hs.134873 NM_152694 ENSG00000179300 RTL3 Mar3|Mart3|SIRH9|ZCCHC5|ZHC5 retrotransposon Gag like 3 protein-coding chr22-3991 chr22 38749650 38749860 + 5.77 0.000 intron (NM_001199579, intron 6 of 17) intron (NM_001199579, intron 6 of 17) 5711 NM_001199580 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr1-9048 chr1 12661163 12661373 + 5.77 0.000 intron (NM_001013630, intron 2 of 3) MER5B|DNA|hAT-Charlie 16721 NM_001013630 343066 Hs.209954 NM_001013630 ENSG00000204518 AADACL4 - arylacetamide deacetylase like 4 protein-coding chr2-13986 chr2 190145109 190145319 + 5.77 0.000 intron (NM_001042521, intron 1 of 2) AluJr|SINE|Alu -5032 NM_001042520 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding chr3-4998 chr3 22809198 22809408 + 5.77 0.000 Intergenic MER67D|LTR|ERV1 393275 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr7-2929 chr7 135312993 135313203 + 5.77 0.000 Intergenic Intergenic 81119 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr3-10486 chr3 135263288 135263498 + 5.77 0.000 Intergenic Intergenic 468133 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding KI270730.1-10 KI270730.1 91932 92142 + 5.77 0.000 NA NA NA NA chr12-5675 chr12 96906955 96907165 + 5.77 0.000 promoter-TSS (NM_152905) promoter-TSS (NM_152905) -197 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr17-4503 chr17 72325630 72325840 + 5.77 0.000 Intergenic Intergenic -17076 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr2-13958 chr2 187230522 187230732 + 5.77 0.000 Intergenic Intergenic 217625 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chrX-3842 chrX 153037894 153038104 + 5.77 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -18471 NM_013364 29944 Hs.449627 NM_013364 ENSG00000183837 PNMA3 MA3|MA5 PNMA family member 3 protein-coding chr8-3595 chr8 139749731 139749941 + 5.77 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -46713 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr9-8320 chr9 114495048 114495258 + 5.77 0.000 intron (NM_015404, intron 1 of 11) intron (NM_015404, intron 1 of 11) 8062 NM_001083885 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr3-7035 chr3 172731927 172732137 + 5.77 0.000 Intergenic Intergenic -18653 NM_001258316 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr12-6931 chr12 25557049 25557259 + 5.77 0.000 intron (NM_001352234, intron 1 of 8) intron (NM_001352234, intron 1 of 8) -3871 NM_152590 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr18-3311 chr18 55228384 55228594 + 5.77 0.000 intron (NM_001348216, intron 11 of 12) intron (NM_001348216, intron 11 of 12) 74171 NM_001243236 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr21-904 chr21 24041215 24041425 + 5.77 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 280057 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr3-7834 chr3 108096734 108096944 + 5.77 0.000 Intergenic Intergenic -5751 NM_001777 961 Hs.446414 NM_001777 ENSG00000196776 CD47 IAP|MER6|OA3 CD47 molecule protein-coding chr22-3697 chr22 24525504 24525714 + 5.77 0.000 intron (NM_016327, intron 9 of 9) intron (NM_016327, intron 9 of 9) 29529 NM_031444 83606 Hs.9850 NM_031444 ENSG00000138867 GUCD1 C22orf13|LLN4 guanylyl cyclase domain containing 1 protein-coding chr14-3847 chr14 76094816 76095026 + 5.77 0.000 Intergenic Intergenic -56964 NM_001322029 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr12-2950 chr12 101969185 101969395 + 5.77 0.000 Intergenic AluSz|SINE|Alu 91710 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr3-11183 chr3 192929836 192930046 + 5.77 0.000 Intergenic Intergenic -12085 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr2-6595 chr2 234873714 234873924 + 5.77 0.000 Intergenic Intergenic -78198 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr9-6118 chr9 6725221 6725431 + 5.77 0.000 intron (NM_001146696, intron 1 of 17) intron (NM_001146696, intron 1 of 17) 4463 NM_001146696 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr6-8497 chr6 157594457 157594667 + 5.77 0.000 intron (NM_024630, intron 3 of 8) MIR|SINE|MIR 65430 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chrX-3224 chrX 54789546 54789756 + 5.77 0.000 intron (NM_198510, intron 4 of 12) MIR|SINE|MIR 8604 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr14-3639 chr14 73183905 73184115 + 5.77 0.000 intron (NM_000021, intron 5 of 11) SVA_F|Retroposon|SVA 47503 NM_000021 5663 Hs.3260 NM_000021 ENSG00000080815 PSEN1 ACNINV3|AD3|FAD|PS-1|PS1|S182 presenilin 1 protein-coding chr3-11202 chr3 193900154 193900364 + 5.77 0.000 Intergenic Intergenic -56250 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr7-8375 chr7 44531529 44531739 + 5.77 0.000 intron (NM_013389, intron 10 of 19) intron (NM_013389, intron 10 of 19) 9696 NM_001300967 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr17-5856 chr17 67712201 67712411 + 5.77 0.000 Intergenic L2|LINE|L2 -5527 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr10-7526 chr10 14288244 14288454 + 5.77 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 42535 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr22-3505 chr22 48523655 48523865 + 5.77 0.000 intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) 23627 NR_038917 284933 Hs.159057 NR_038917 ENSG00000281732 LOC284933 - uncharacterized LOC284933 ncRNA chr6-6635 chr6 153947726 153947936 + 5.77 0.000 Intergenic Intergenic -62665 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr1-14737 chr1 67099386 67099596 + 5.77 0.000 intron (NM_001276351, intron 5 of 7) L1MEi|LINE|L1 35479 NR_075077 400757 Hs.666621 NM_001013674 ENSG00000203963 C1orf141 - chromosome 1 open reading frame 141 protein-coding chr20-4026 chr20 36735338 36735548 + 5.77 0.000 intron (NM_032013, intron 1 of 15) intron (NM_032013, intron 1 of 15) 10647 NM_022477 57446 Hs.437338 NM_022477 ENSG00000101079 NDRG3 - NDRG family member 3 protein-coding chr10-3843 chr10 5666480 5666690 + 5.77 0.000 promoter-TSS (NR_024581) promoter-TSS (NR_024581) 10 NR_037164 79754 Hs.445899 NM_024701 ENSG00000196372 ASB13 - ankyrin repeat and SOCS box containing 13 protein-coding chr6-8351 chr6 148348482 148348692 + 5.77 0.000 intron (NM_001346506, intron 1 of 20) MIRc|SINE|MIR 5749 NM_001346506 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr2-3447 chr2 110806819 110807029 + 5.77 0.000 intron (NM_001371254, intron 9 of 18) intron (NM_001371254, intron 9 of 18) 74351 NM_001371254 chr2-7182 chr2 208462896 208463106 + 5.77 0.000 intron (NM_005048, intron 9 of 12) intron (NM_005048, intron 9 of 12) 56171 NM_005048 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr10-6506 chr10 59573767 59573977 + 5.77 0.000 Intergenic L1MA9|LINE|L1 136019 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr17-6056 chr17 79426257 79426467 + 5.77 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 89786 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr11-6783 chr11 87835320 87835530 + 5.77 0.000 Intergenic Intergenic -116014 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr18-1725 chr18 3670998 3671208 + 5.77 0.000 intron (NM_001308390, intron 4 of 10) intron (NM_001308390, intron 4 of 10) 67366 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr1-14109 chr1 31040214 31040424 + 5.77 0.000 intron (NM_001020658, intron 2 of 21) L2c|LINE|L2 25398 NM_014676 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr8-5765 chr8 141868184 141868394 + 5.77 0.000 Intergenic L1MC3|LINE|L1 -81976 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr8-4833 chr8 25201531 25201741 + 5.77 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 16947 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr1-8382 chr1 73293791 73294001 + 5.77 0.000 Intergenic MIR|SINE|MIR -12274 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chr21-1018 chr21 20222378 20222588 + 5.77 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR 36202 NR_151724 111216285 Hs.561034 NR_151724 LINC02573 - long intergenic non-protein coding RNA 2573 ncRNA chr8-6932 chr8 103588637 103588847 + 5.77 0.000 intron (NM_001348497, intron 1 of 22) L1MA1|LINE|L1 -86832 NR_145698 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA chr20-2447 chr20 25494011 25494221 + 5.77 0.000 intron (NM_025176, intron 10 of 23) intron (NM_025176, intron 10 of 23) 86433 NR_134574 9837 Hs.658464 NM_021067 ENSG00000101003 GINS1 IMD55|PSF1 GINS complex subunit 1 protein-coding chr7-8348 chr7 43446973 43447183 + 5.77 0.000 intron (NM_001287059, intron 10 of 27) MER58D|DNA|hAT-Charlie 75464 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr21-1079 chr21 32412685 32412895 + 5.77 0.000 promoter-TSS (NM_001320744) promoter-TSS (NM_001320744) 84 NM_001320744 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr18-3190 chr18 45620104 45620314 + 5.77 0.000 intron (NM_007163, intron 1 of 19) intron (NM_007163, intron 1 of 19) 4733 NM_007163 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr8-6113 chr8 28235084 28235294 + 5.77 0.000 Intergenic Intergenic -82079 NM_006228 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr18-3230 chr18 47981255 47981465 + 5.77 0.000 Intergenic Intergenic -50214 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chrX-1225 chrX 79772492 79772702 + 5.77 0.000 Intergenic L1PA13|LINE|L1 -242156 NM_001109879 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr2-10855 chr2 61460313 61460523 + 5.77 0.000 intron (NM_014709, intron 1 of 79) Tigger7|DNA|TcMar-Tigger 10669 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding chr1-11525 chr1 157424129 157424339 + 5.77 0.000 Intergenic L1P3|LINE|L1 128281 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chrX-2514 chrX 95611597 95611807 + 5.77 0.000 Intergenic LTR49-int|LTR|ERV1 -548476 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr2-10543 chr2 236628821 236629031 + 5.77 0.000 Intergenic Intergenic 59101 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr4-7446 chr4 68283556 68283766 + 5.77 0.000 Intergenic Intergenic -37967 NM_182502 132724 Hs.407122 NM_182502 ENSG00000185873 TMPRSS11B - transmembrane serine protease 11B protein-coding chr3-9497 chr3 50739840 50740050 + 5.77 0.000 intron (NM_004947, intron 1 of 52) L1ME1|LINE|L1 64865 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr3-10291 chr3 125359785 125359995 + 5.77 0.000 intron (NM_001348427, intron 1 of 9) intron (NM_001348427, intron 1 of 9) -2610 NM_001348433 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr14-3932 chr14 104138854 104139064 + 5.77 0.000 promoter-TSS (NR_158217) promoter-TSS (NR_158217) 236 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding chr4-8443 chr4 154839747 154839957 + 5.77 0.000 Intergenic LTR22C2|LTR|ERVK 58347 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr14-3557 chr14 105047846 105048056 + 5.77 0.000 Intergenic Intergenic 17479 NM_001278696 29933 Hs.532504 NM_013345 ENSG00000183484 GPR132 G2A G protein-coupled receptor 132 protein-coding chr1-9078 chr1 15860452 15860662 + 5.77 0.000 intron (NM_015001, intron 1 of 14) AluJb|SINE|Alu -12410 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr5-6622 chr5 40866558 40866768 + 5.77 0.000 Intergenic Intergenic 25296 NM_032587 84674 Hs.200242 NM_032587 ENSG00000132357 CARD6 CINCIN1 caspase recruitment domain family member 6 protein-coding chr1-11781 chr1 22816348 22816558 + 5.77 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 46773 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr12-6386 chr12 69468292 69468502 + 5.77 0.000 Intergenic MER5A|DNA|hAT-Charlie -1991 NM_001042555 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding chr12-8285 chr12 125797516 125797726 + 5.77 0.000 Intergenic Intergenic 175169 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr14-3830 chr14 73865895 73866105 + 5.77 0.000 intron (NM_001371328, intron 3 of 8) intron (NM_001371328, intron 3 of 8) 14053 NM_001146155 145482 Hs.632344 NM_152444 ENSG00000140043 PTGR2 HEL-S-298|PGR2|ZADH1 prostaglandin reductase 2 protein-coding chr8-7448 chr8 141140855 141141065 + 5.77 0.000 intron (NM_001362798, intron 3 of 21) L2c|LINE|L2 12371 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr17-6676 chr17 76641042 76641252 + 5.77 0.000 intron (NM_001289107, intron 1 of 9) LTR15|LTR|ERV1 2610 NM_018414 55808 Hs.105352 NM_018414 ENSG00000070526 ST6GALNAC1 HSY11339|SIAT7A|ST6GalNAcI|STYI ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 protein-coding chr10-4546 chr10 98919982 98920192 + 5.77 0.000 intron (NM_021828, intron 3 of 11) LTR16B1|LTR|ERVL 4481 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr11-8685 chr11 4494430 4494640 + 5.77 0.000 Intergenic HERVK13-int|LTR|ERVK 5656 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr20-3238 chr20 63283223 63283433 + 5.77 0.000 promoter-TSS (NR_104023) promoter-TSS (NR_104023) -984 NR_104023 55738 Hs.25584 NM_018209 ENSG00000101199 ARFGAP1 ARF1GAP|HRIHFB2281 ADP ribosylation factor GTPase activating protein 1 protein-coding chr2-14227 chr2 210719892 210720102 + 5.77 0.000 Intergenic Intergenic 102426 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr17-4708 chr17 30796603 30796813 + 5.77 0.000 intron (NM_015986, intron 3 of 7) intron (NM_015986, intron 3 of 7) 27984 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr4-5724 chr4 42203902 42204112 + 5.77 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -51352 NM_207406 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr2-9749 chr2 80167838 80168048 + 5.77 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) 136809 NM_178839 347730 Hs.591580 NM_178839 ENSG00000162951 LRRTM1 - leucine rich repeat transmembrane neuronal 1 protein-coding chr14-3111 chr14 65432801 65433011 + 5.77 0.000 intron (NR_038170, intron 1 of 10) MER41A|LTR|ERV1 20176 NR_038170 2530 Hs.597649 NM_004480 ENSG00000033170 FUT8 CDGF|CDGF1 fucosyltransferase 8 protein-coding chr15-4860 chr15 75154241 75154451 + 5.77 0.000 Intergenic Intergenic -47536 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr13-4120 chr13 81286280 81286490 + 5.77 0.000 Intergenic L1MC1|LINE|L1 -59402 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr2-13018 chr2 107957262 107957472 + 5.77 0.000 Intergenic L1M4|LINE|L1 -29157 NM_021815 60482 Hs.287758 NM_021815 ENSG00000115665 SLC5A7 CHT|CHT1|CMS20|HMN7A solute carrier family 5 member 7 protein-coding chr18-1403 chr18 79766982 79767192 + 5.77 0.000 Intergenic Intergenic 85657 NM_001202504 9150 Hs.465490 NM_004715 ENSG00000060069 CTDP1 CCFDN|FCP1 CTD phosphatase subunit 1 protein-coding chr7-8124 chr7 27057450 27057660 + 5.77 0.000 Intergenic AluSx1|SINE|Alu 38445 NM_153620 3198 Hs.67397 NM_005522 ENSG00000105991 HOXA1 BSAS|HOX1|HOX1F homeobox A1 protein-coding chr1-6928 chr1 153565701 153565911 + 5.77 0.000 promoter-TSS (NM_001366407) promoter-TSS (NM_001366407) 38 NM_001366407 6273 Hs.516484 NM_005978 ENSG00000196754 S100A2 CAN19|S100L S100 calcium binding protein A2 protein-coding chr11-9949 chr11 76628102 76628312 + 5.77 0.000 Intergenic Intergenic 41731 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr2-2412 chr2 28528829 28529039 + 5.77 0.000 intron (NM_001170585, intron 6 of 56) intron (NM_001170585, intron 6 of 56) 32863 NM_001170585 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2-8989 chr2 192016960 192017170 + 5.77 0.000 intron (NM_001305134, intron 5 of 9) L2c|LINE|L2 -169977 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding chr10-7847 chr10 45805040 45805250 + 5.77 0.000 Intergenic L1ME1|LINE|L1 12179 NM_001351234 643479 Hs.522900 NM_001351234 FAM25E FAM25D family with sequence similarity 25 member E protein-coding chr19-6590 chr19 27360334 27360544 + 5.77 0.000 Intergenic ALR/Alpha|Satellite|centr -432992 NR_146735 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA chr5-6139 chr5 35330132 35330342 + 5.77 0.000 Intergenic L1PA13|LINE|L1 -99750 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr2-9606 chr2 241629891 241630101 + 5.77 0.000 intron (NM_015963, intron 2 of 5) L1MEd|LINE|L1 7162 NM_015963 51078 Hs.435759 NM_015963 ENSG00000176946 THAP4 CGI-36|Nb(III)|PP238 THAP domain containing 4 protein-coding chr5-3917 chr5 171367333 171367543 + 5.77 0.000 Intergenic AluSc8|SINE|Alu 1320 NR_145720 109616973 NR_145720 ENSG00000206909 SNORA70J - small nucleolar RNA, H/ACA box 70J snoRNA chr3-8503 chr3 130267672 130267882 + 5.77 0.000 non-coding (NR_027898, exon 23 of 23) non-coding (NR_027898, exon 23 of 23) 54957 NR_027898 646300 Hs.170475 NR_027898 COL6A4P2 COL6A4 collagen type VI alpha 4 pseudogene 2 pseudo chr7-9016 chr7 101054041 101054251 + 5.77 0.000 intron (NM_001040105, intron 11 of 12) intron (NM_001040105, intron 11 of 12) -31335 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding chr1-9783 chr1 56688703 56688913 + 5.77 0.000 intron (NM_006252, intron 2 of 8) L2c|LINE|L2 -43490 NR_135111 101929935 NR_135111 LOC101929935 - uncharacterized LOC101929935 ncRNA chr4-6756 chr4 6328096 6328306 + 5.77 0.000 intron (NM_001206994, intron 9 of 9) intron (NM_001206994, intron 9 of 9) 53667 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr19-3249 chr19 1774992 1775202 + 5.77 0.000 intron (NM_001080488, intron 1 of 1) CpG 21591 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr6-6451 chr6 102084809 102085019 + 5.77 0.000 Intergenic Intergenic 685929 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr22-2773 chr22 41357513 41357723 + 5.77 0.000 3' UTR (NM_017590, exon 23 of 23) 3' UTR (NM_017590, exon 23 of 23) -9715 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr10-7915 chr10 50687185 50687395 + 5.77 0.000 Intergenic Intergenic -52398 NR_135904 653308 Hs.659820 NM_001079516 ENSG00000204147 ASAH2B ASAH2C|ASAH2L|bA449O16.3|bA98I6.3 N-acylsphingosine amidohydrolase 2B protein-coding chr4-8517 chr4 162512084 162512294 + 5.77 0.000 Intergenic Intergenic -348155 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chrX-4324 chrX 45386391 45386601 + 5.77 0.000 Intergenic Intergenic -118892 NR_104644 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA chr11-7284 chr11 35991801 35992011 + 5.77 0.000 intron (NM_001304264, intron 1 of 5) intron (NM_001304264, intron 1 of 5) -18192 NR_039769 100616311 NR_039769 ENSG00000263389 MIR3973 - microRNA 3973 ncRNA chr8-6991 chr8 108225411 108225621 + 5.77 0.000 intron (NM_001568, intron 7 of 12) Charlie1|DNA|hAT-Charlie 23201 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr4-7660 chr4 85672404 85672614 + 5.77 0.000 intron (NM_001025616, intron 2 of 9) intron (NM_001025616, intron 2 of 9) -49959 NR_039656 100616349 NR_039656 ENSG00000266421 MIR4451 mir-4451 microRNA 4451 ncRNA chrX-2842 chrX 139057706 139057916 + 5.77 0.000 intron (NM_001139501, intron 2 of 7) L1MB7|LINE|L1 147212 NM_001139501 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr2-13996 chr2 190755019 190755229 + 5.77 0.000 Intergenic Intergenic 95966 NM_001321314 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr2-10275 chr2 127428724 127428934 + 5.77 0.000 exon (NM_000312, exon 9 of 9) exon (NM_000312, exon 9 of 9) -5211 NR_039944 100616187 NR_039944 ENSG00000264075 MIR4783 - microRNA 4783 ncRNA chr5-6688 chr5 63070881 63071091 + 5.77 0.000 Intergenic Intergenic 492167 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr11-8054 chr11 26018263 26018473 + 5.77 0.000 Intergenic MIR|SINE|MIR -170755 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr9-7576 chr9 35901663 35901873 + 5.77 0.000 Intergenic AluJb|SINE|Alu -4434 NM_001039792 646962 Hs.208081 NM_001039792 ENSG00000196196 HRCT1 LGLL338|PRO537|UNQ338 histidine rich carboxyl terminus 1 protein-coding chr1-6149 chr1 173412027 173412237 + 5.77 0.000 intron (NR_037845, intron 2 of 2) AluSx3|SINE|Alu 49230 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr10-5653 chr10 97414255 97414465 + 5.77 0.000 Intergenic Intergenic 11697 NR_157582 644215 NR_157582 LOC644215 - uncharacterized LOC644215 ncRNA chr12-3335 chr12 89671575 89671785 + 5.77 0.000 intron (NM_001001323, intron 1 of 21) MamRep605|LTR?|LTR? 37158 NM_001366532 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr7-8876 chr7 90825866 90826076 + 5.77 0.000 intron (NM_012395, intron 4 of 13) intron (NM_012395, intron 4 of 13) 116155 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr4-4746 chr4 95313256 95313466 + 5.77 0.000 intron (NM_003728, intron 2 of 15) intron (NM_003728, intron 2 of 15) 221870 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr16-5220 chr16 27652289 27652499 + 5.77 0.000 intron (NM_015202, intron 6 of 27) intron (NM_015202, intron 6 of 27) 66635 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr4-8580 chr4 168621996 168622206 + 5.77 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) -9477 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr9-6879 chr9 85783709 85783919 + 5.77 0.000 Intergenic AluSq|SINE|Alu -22188 NR_029410 389765 Hs.715986 NR_029410 LOC389765 - kinesin family member 27 pseudogene pseudo chr13-3389 chr13 88227279 88227489 + 5.77 0.000 intron (NR_131919, intron 3 of 4) MLT2B4|LTR|ERVL 84517 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr14-5183 chr14 92813756 92813966 + 5.77 0.000 intron (NM_005113, intron 6 of 12) L2c|LINE|L2 19556 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr13-3367 chr13 78603300 78603510 + 5.77 0.000 5' UTR (NM_006237, exon 1 of 2) 5' UTR (NM_006237, exon 1 of 2) 147 NM_006237 5457 Hs.654522 NM_006237 ENSG00000152192 POU4F1 BRN3A|Oct-T1|RDC-1|brn-3A POU class 4 homeobox 1 protein-coding chr5-8749 chr5 146792629 146792839 + 5.77 0.000 intron (NM_001271899, intron 2 of 9) L2a|LINE|L2 86051 NM_001271948 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr15-4512 chr15 52287215 52287425 + 5.77 0.000 intron (NM_018728, intron 1 of 40) intron (NM_018728, intron 1 of 40) 8484 NM_018728 55930 Hs.487036 NM_018728 ENSG00000128833 MYO5C - myosin VC protein-coding chr6-1689 chr6 14513504 14513714 + 5.77 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -228155 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr15-5037 chr15 83815691 83815901 + 5.77 0.000 intron (NM_207517, intron 5 of 29) MIRc|SINE|MIR 161673 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr15-4289 chr15 38130995 38131205 + 5.77 0.000 Intergenic Intergenic -58110 NR_147200 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chrX-2798 chrX 133666124 133666334 + 5.77 0.000 intron (NM_001164619, intron 4 of 6) CR1_Mam|LINE|CR1 -231214 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr4-5698 chr4 30609284 30609494 + 5.77 0.000 Intergenic Intergenic -110980 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr4-8145 chr4 128427983 128428193 + 5.77 0.000 promoter-TSS (NR_125882) promoter-TSS (NR_125882) 72 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr1-14238 chr1 36494623 36494833 + 5.77 0.000 Intergenic L2|LINE|L2 -11414 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr1-14860 chr1 79042031 79042241 + 5.77 0.000 Intergenic Intergenic -35406 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr15-2190 chr15 88711838 88712048 + 5.77 0.000 Intergenic Intergenic 72927 NM_001303236 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr16-6941 chr16 85577095 85577305 + 5.77 0.000 Intergenic Intergenic -34209 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr11-3390 chr11 130897394 130897604 + 5.66 0.000 intron (NM_014758, intron 8 of 10) intron (NM_014758, intron 8 of 10) 18988 NM_001347923 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr9-7466 chr9 27810855 27811065 + 5.66 0.000 Intergenic L1P4|LINE|L1 -237094 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr6-7231 chr6 40705855 40706065 + 5.66 0.000 Intergenic Intergenic -118596 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr2-14828 chr2 241552441 241552651 + 5.66 0.000 intron (NR_033346, intron 1 of 1) intron (NR_033346, intron 1 of 1) -6199 NM_032515 666 Hs.293753 NM_032515 ENSG00000176720 BOK BCL2L9|BOKL BCL2 family apoptosis regulator BOK protein-coding chr20-4340 chr20 54064512 54064722 + 5.66 0.000 intron (NM_001366297, intron 1 of 8) intron (NM_001366297, intron 1 of 8) 3868 NR_039913 100616225 NR_039913 ENSG00000265595 MIR4756 - microRNA 4756 ncRNA chr21-1263 chr21 16001186 16001396 + 5.66 0.000 Intergenic Intergenic -69197 NR_136541 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr18-2486 chr18 50188771 50188981 + 5.66 0.000 intron (NM_001080467, intron 1 of 39) intron (NM_001080467, intron 1 of 39) 6271 NM_001080467 4645 Hs.720076 NM_001080467 ENSG00000167306 MYO5B - myosin VB protein-coding chr6-7742 chr6 91303430 91303640 + 5.66 0.000 Intergenic LTR12D|LTR|ERV1 -218125 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr19-3589 chr19 48927295 48927505 + 5.66 0.000 Intergenic AluSq|SINE|Alu -6299 NM_014475 27294 Hs.631555 NM_014475 ENSG00000104808 DHDH 2DD|HUM2DD dihydrodiol dehydrogenase protein-coding chr7-5450 chr7 39051926 39052136 + 5.66 0.000 intron (NM_007252, intron 2 of 10) intron (NM_007252, intron 2 of 10) -38464 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr1-13095 chr1 182660650 182660860 + 5.66 0.000 intron (NM_001102450, intron 5 of 6) MER5A|DNA|hAT-Charlie 11169 NM_001369564 85397 Hs.20982 NM_033345 ENSG00000135824 RGS8 - regulator of G protein signaling 8 protein-coding chr3-4864 chr3 162742039 162742249 + 5.66 0.000 Intergenic Intergenic 561157 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chrX-4934 chrX 110634621 110634831 + 5.66 0.000 Intergenic Intergenic 114414 NR_002718 6998 Hs.592361 NR_002718 ENSG00000225366 TDGF1P3 CR-3|CRIPTO|CRIPTO-3|CRIPTO3|TDGF1|TDGF2|TDGF3 teratocarcinoma-derived growth factor 1 pseudogene 3 pseudo chrX-3247 chrX 76243482 76243692 + 5.66 0.000 Intergenic AluSz6|SINE|Alu 70525 NM_016500 51260 Hs.370100 NM_016500 ENSG00000102390 PBDC1 CXorf26 polysaccharide biosynthesis domain containing 1 protein-coding chr1-8148 chr1 13811799 13812009 + 5.66 0.000 intron (NM_012231, intron 8 of 9) L2c|LINE|L2 62489 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chrX-5131 chrX 129868694 129868904 + 5.66 0.000 Intergenic Intergenic -24913 NM_016032 51114 Hs.193566 NM_016032 ENSG00000188706 ZDHHC9 CGI89|CXorf11|DHHC9|MMSA1|MRXSZ|ZDHHC10|ZNF379|ZNF380 zinc finger DHHC-type containing 9 protein-coding chr19-6288 chr19 8120016 8120226 + 5.66 0.000 intron (NM_032447, intron 25 of 63) intron (NM_032447, intron 25 of 63) 28748 NM_001321431 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr22-2805 chr22 42801491 42801701 + 5.66 0.000 intron (NM_001142293, intron 13 of 14) intron (NM_001142293, intron 13 of 14) 55677 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr15-3157 chr15 67917154 67917364 + 5.66 0.000 Intergenic Intergenic -77214 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr1-7675 chr1 19057952 19058162 + 5.66 0.000 Intergenic Intergenic -101381 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chrX-3818 chrX 144899325 144899535 + 5.66 0.000 Intergenic Intergenic -348073 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr4-2468 chr4 1789629 1789839 + 5.66 0.000 Intergenic Intergenic -3559 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr1-13773 chr1 17470328 17470538 + 5.66 0.000 Intergenic MER34C_|LTR|ERV1 -30756 NM_018715 55920 Hs.380857 NM_018715 ENSG00000179051 RCC2 TD-60 regulator of chromosome condensation 2 protein-coding chr16-5289 chr16 65309477 65309687 + 5.66 0.000 intron (NR_027755, intron 8 of 8) intron (NR_027755, intron 8 of 8) -133009 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr13-3559 chr13 24971944 24972154 + 5.66 0.000 Intergenic L1PA15-16|LINE|L1 -3580 NR_026730 646405 Hs.620592 NM_001126062 TPTE2P1 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 pseudo chr7-7145 chr7 3375024 3375234 + 5.66 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 73877 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr20-3188 chr20 46846543 46846753 + 5.66 0.000 Intergenic AluY|SINE|Alu -47976 NM_172110 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr12-8248 chr12 124588651 124588861 + 5.66 0.000 Intergenic L3|LINE|CR1 -21144 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr9-8822 chr9 134969735 134969945 + 5.66 0.000 Intergenic Intergenic -51928 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr1-4683 chr1 225373084 225373294 + 5.66 0.000 intron (NM_001367479, intron 77 of 85) GA-rich|Low_complexity|Low_complexity 54849 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr15-2566 chr15 55060166 55060376 + 5.66 0.000 intron (NR_135679, intron 1 of 1) intron (NR_135679, intron 1 of 1) 3524 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr6-5338 chr6 145984547 145984757 + 5.66 0.000 Intergenic L2c|LINE|L2 -20294 NM_001370328 257218 Hs.723297 NM_173082 ENSG00000146414 SHPRH bA545I5.2 SNF2 histone linker PHD RING helicase protein-coding chr22-2098 chr22 23561112 23561322 + 5.66 0.000 Intergenic SVA_D|Retroposon|SVA 19073 NM_001369906 3543 Hs.348935 NM_020070 ENSG00000128322 IGLL1 14.1|AGM2|CD179b|IGL1|IGL5|IGLJ14.1|IGLL|IGO|IGVPB|VPREB2 immunoglobulin lambda like polypeptide 1 protein-coding chr7-6610 chr7 101299788 101299998 + 5.66 0.000 intron (NR_146480, intron 1 of 1) L1M2|LINE|L1 280 NR_146480 101927721 Hs.148659 NR_146480 ENSG00000232301 LNCPRESS1 - lncRNA p53 regulated and ESC associated 1 ncRNA chr11-5246 chr11 26995064 26995274 + 5.66 0.000 3' UTR (NM_203371, exon 1 of 1) 3' UTR (NM_203371, exon 1 of 1) 1057 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr18-3133 chr18 38718661 38718871 + 5.66 0.000 Intergenic LTR12C|LTR|ERV1 903409 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr14-3841 chr14 75091258 75091468 + 5.66 0.000 exon (NM_001329238, exon 19 of 22) exon (NM_001329238, exon 19 of 22) 21722 NM_001330191 79696 Hs.48642 NM_024643 ENSG00000119703 ZC2HC1C C14orf140|FAM164C zinc finger C2HC-type containing 1C protein-coding chr4-5835 chr4 104326810 104327020 + 5.66 0.000 Intergenic L1PA4|LINE|L1 -164050 NR_125926 101929468 Hs.480435 NR_125926 ENSG00000245384 CXXC4-AS1 - CXXC4 antisense RNA 1 ncRNA chr13-2158 chr13 110356608 110356818 + 5.66 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) 15755 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr4-4950 chr4 127732633 127732843 + 5.66 0.000 intron (NM_001318467, intron 1 of 6) intron (NM_001318467, intron 1 of 6) 2338 NM_001318467 83447 Hs.149030 NM_031291 ENSG00000151475 SLC25A31 AAC4|ANT 4|ANT4|SFEC35kDa solute carrier family 25 member 31 protein-coding chr18-2927 chr18 13289059 13289269 + 5.66 0.000 intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 11059 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr9-6626 chr9 130486007 130486217 + 5.66 0.000 intron (NM_054012, intron 11 of 14) AluJr|SINE|Alu 41151 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr19-5516 chr19 47634617 47634827 + 5.66 0.000 intron (NM_015711, intron 1 of 14) L2a|LINE|L2 26526 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr1-14365 chr1 42652342 42652552 + 5.66 0.000 intron (NM_001080850, intron 15 of 16) L1MA3|LINE|L1 -5976 NM_001330510 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr3-8284 chr3 54906481 54906691 + 5.66 0.000 intron (NM_018398, intron 27 of 37) intron (NM_018398, intron 27 of 37) -5331 NR_046666 100874237 Hs.570583 NR_046666 ENSG00000243715 CACNA2D3-AS1 - CACNA2D3 antisense RNA 1 ncRNA chr1-9728 chr1 53485614 53485824 + 5.66 0.000 Intergenic Intergenic 26320 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr12-6881 chr12 20986489 20986699 + 5.66 0.000 intron (NM_001371097, intron 13 of 15) AluSz6|SINE|Alu -29102 NM_001009562 338821 Hs.729117 NM_001009562 ENSG00000205754 SLCO1B7 LST-3|LST-3TM12|LST3|SLC21A21 solute carrier organic anion transporter family member 1B7 (putative) protein-coding chr11-8947 chr11 18959378 18959588 + 5.66 0.000 Intergenic Intergenic -24481 NM_147199 259249 Hs.711459 NM_147199 ENSG00000170255 MRGPRX1 GPCR|MGRG2|MRGX1|SNSR4 MAS related GPR family member X1 protein-coding chr4-7738 chr4 92161267 92161477 + 5.66 0.000 Intergenic THE1B|LTR|ERVL-MaLR 115930 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr3-6856 chr3 150773272 150773482 + 5.66 0.000 Intergenic Intergenic -10208 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding chrX-1777 chrX 71482977 71483187 + 5.66 0.000 intron (NR_104387, intron 38 of 39) AluJo|SINE|Alu 9367 NR_002226 27160 Hs.721806 NR_002226 ENSG00000243468 INGX ING1-like|ING2 inhibitor of growth family, X-linked (pseudogene) pseudo chr1-12664 chr1 44769699 44769909 + 5.66 0.000 Intergenic AluSg|SINE|Alu -5736 NM_001012 6202 Hs.512675 NM_001012 ENSG00000142937 RPS8 S8 ribosomal protein S8 protein-coding chr2-4882 chr2 119562209 119562419 + 5.66 0.000 intron (NR_073132, intron 6 of 24) MLT1K|LTR|ERVL-MaLR 17865 NM_001271049 200373 Hs.496753 NM_001029996 ENSG00000163075 CFAP221 FAP221|PCDP1 cilia and flagella associated protein 221 protein-coding chr17-8299 chr17 69567239 69567449 + 5.66 0.000 Intergenic Intergenic -26643 NR_109972 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr20-3159 chr20 39491501 39491711 + 5.66 0.000 Intergenic L2b|LINE|L2 -266858 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr6-7488 chr6 61865797 61866007 + 5.66 0.000 intron (NM_001350622, intron 6 of 9) THE1B-int|LTR|ERVL-MaLR 291772 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr22-1952 chr22 48754503 48754713 + 5.66 0.000 Intergenic Intergenic -25687 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr14-4558 chr14 45304742 45304952 + 5.66 0.000 Intergenic L1PA17|LINE|L1 -51645 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding chr9-4365 chr9 132893306 132893516 + 5.66 0.000 3' UTR (NM_001162426, exon 23 of 23) 3' UTR (NM_001162426, exon 23 of 23) 14513 NM_001316897 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr15-4685 chr15 65532776 65532986 + 5.66 0.000 intron (NM_016395, intron 1 of 10) intron (NM_016395, intron 1 of 10) 2418 NM_016395 51495 Hs.512973 NM_016395 ENSG00000074696 HACD3 B-IND1|BIND1|HSPC121|PTPLAD1 3-hydroxyacyl-CoA dehydratase 3 protein-coding chr5-6766 chr5 83925165 83925375 + 5.66 0.000 Intergenic Intergenic -204415 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr16-6393 chr16 53848193 53848403 + 5.66 0.000 intron (NR_156761, intron 3 of 4) intron (NR_156761, intron 3 of 4) 144142 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr3-7245 chr3 195163411 195163621 + 5.66 0.000 intron (NM_152531, intron 2 of 3) MIRc|SINE|MIR 15645 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr17-8239 chr17 65396836 65397046 + 5.66 0.000 Intergenic Intergenic -60600 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr9-7376 chr9 17593901 17594111 + 5.66 0.000 intron (NM_003026, intron 1 of 8) intron (NM_003026, intron 1 of 8) 14940 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr16-6833 chr16 81695485 81695695 + 5.66 0.000 intron (NM_030629, intron 13 of 20) intron (NM_030629, intron 13 of 20) 30236 NR_045112 100129617 Hs.657151 NR_045112 LOC100129617 - uncharacterized LOC100129617 ncRNA chr17-8059 chr17 51270664 51270874 + 5.66 0.000 intron (NM_016001, intron 4 of 13) MLT1J1|LTR|ERVL-MaLR 10223 NM_016001 51096 Hs.709327 NM_016001 ENSG00000011260 UTP18 CGI-48|WDR50 UTP18 small subunit processome component protein-coding chr12-7324 chr12 54706306 54706516 + 5.66 0.000 Intergenic Intergenic -58046 NM_053283 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr15-5132 chr15 90058386 90058596 + 5.66 0.000 intron (NM_198526, intron 1 of 4) intron (NM_198526, intron 1 of 4) 23716 NR_146321 109729181 Hs.655249 NR_146321 ENSG00000259291 ZNF710-AS1 - ZNF710 antisense RNA 1 ncRNA chr12-6699 chr12 4447270 4447480 + 5.66 0.000 Intergenic Intergenic -1761 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr6-4964 chr6 104839827 104840037 + 5.66 0.000 intron (NR_146787, intron 4 of 21) AluSx|SINE|Alu 19614 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr12-8211 chr12 123553550 123553760 + 5.66 0.000 Intergenic HERV17-int|LTR|ERV1 17246 NR_037470 100500909 NR_037470 ENSG00000266655 MIR3908 - microRNA 3908 ncRNA chr7-5887 chr7 94011561 94011771 + 5.66 0.000 Intergenic LTR12C|LTR|ERV1 -7311 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr13-4085 chr13 77479332 77479542 + 5.66 0.000 Intergenic AluJo|SINE|Alu -56237 NM_001160706 8796 Hs.534699 NM_003843 ENSG00000136155 SCEL - sciellin protein-coding chr2-9179 chr2 214974488 214974698 + 5.66 0.000 intron (NR_103740, intron 37 of 54) intron (NR_103740, intron 37 of 54) 57493 NM_015657 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr6-7695 chr6 86601823 86602033 + 5.66 0.000 Intergenic HERVH-int|LTR|ERV1 -335600 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr10-6828 chr10 21027347 21027557 + 5.66 0.000 intron (NM_001173484, intron 2 of 6) AluJb|SINE|Alu -129850 NM_006393 10529 Hs.5025 NM_006393 ENSG00000078114 NEBL LASP2|LNEBL nebulette protein-coding chr5-8205 chr5 107326538 107326748 + 5.66 0.000 Intergenic LTR16C|LTR|ERVL -315629 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr10-6347 chr10 124668368 124668578 + 5.66 0.000 intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -35555 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr13-3356 chr13 75705544 75705754 + 5.66 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) -54671 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr6-2849 chr6 2222021 2222231 + 5.66 0.000 intron (NM_001500, intron 1 of 10) intron (NM_001500, intron 1 of 10) 23479 NM_001500 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chrX-4648 chrX 79695514 79695724 + 5.66 0.000 Intergenic L1PA7|LINE|L1 -319134 NM_001109879 50945 Hs.374253 NM_016954 ENSG00000122145 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box transcription factor 22 protein-coding chr22-2807 chr22 42867784 42867994 + 5.66 0.000 Intergenic Intergenic -10616 NM_001142293 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr22-3506 chr22 48528111 48528321 + 5.66 0.000 intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) 19171 NR_038917 284933 Hs.159057 NR_038917 ENSG00000281732 LOC284933 - uncharacterized LOC284933 ncRNA chr6-8309 chr6 144582035 144582245 + 5.66 0.000 intron (NM_007124, intron 50 of 73) intron (NM_007124, intron 50 of 73) 176485 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr11-7090 chr11 122260608 122260818 + 5.66 0.000 intron (NR_137180, intron 2 of 4) MER3|DNA|hAT-Charlie 48774 NR_137180 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr19-5745 chr19 18579547 18579757 + 5.66 0.000 Intergenic HERV30-int|LTR|ERV1 6812 NM_001321021 7311 Hs.5308 NM_003333 ENSG00000221983 UBA52 CEP52|HUBCEP52|L40|RPL40 ubiquitin A-52 residue ribosomal protein fusion product 1 protein-coding chr9-6520 chr9 108784850 108785060 + 5.66 0.000 Intergenic L1MCc|LINE|L1 71031 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr13-3736 chr13 41316315 41316525 + 5.66 0.000 intron (NM_001110798, intron 1 of 10) AluSz|SINE|Alu -4382 NM_001354076 9617 Hs.382176 NM_004294 ENSG00000120662 MTRF1 MRF1|MTTRF1|RF1 mitochondrial translation release factor 1 protein-coding chr17-4243 chr17 49006447 49006657 + 5.66 0.000 intron (NM_001160423, intron 2 of 12) intron (NM_001160423, intron 2 of 12) 9167 NM_001160423 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chrX-4977 chrX 116198067 116198277 + 5.66 0.000 Intergenic ERVL-int|LTR|ERVL 27428 NM_000686 186 Hs.405348 NM_000686 ENSG00000180772 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor type 2 protein-coding chr13-4387 chr13 109008935 109009145 + 5.66 0.000 exon (NM_001198950, exon 22 of 35) exon (NM_001198950, exon 22 of 35) 158263 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr13-2640 chr13 78871537 78871747 + 5.66 0.000 Intergenic Intergenic -31592 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr2-11258 chr2 174436321 174436531 + 5.66 0.000 intron (NM_001267051, intron 14 of 14) intron (NM_001267051, intron 14 of 14) 40696 NM_024583 79634 Hs.470679 NM_024583 ENSG00000144306 SCRN3 SES3 secernin 3 protein-coding chr15-4664 chr15 64756159 64756369 + 5.66 0.000 intron (NR_138350, intron 1 of 7) AluSz|SINE|Alu 4953 NR_138364 348093 Hs.436518 NM_194272 ENSG00000166831 RBPMS2 - RNA binding protein, mRNA processing factor 2 protein-coding chr2-14722 chr2 238545864 238546074 + 5.66 0.000 intron (NR_037809, intron 2 of 2) intron (NR_037809, intron 2 of 2) 9530 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr10-7461 chr10 8290058 8290268 + 5.66 0.000 Intergenic Intergenic -21858 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chr10-8406 chr10 84166667 84166877 + 5.66 0.000 TTS (NR_134505) TTS (NR_134505) 5304 NR_134505 642934 NR_134505 ENSG00000285972 CERNA2 HOST2|lncRNA-HOST2 competing endogenous lncRNA 2 for microRNA let-7b ncRNA chr8-3407 chr8 68243576 68243786 + 5.66 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -86692 NM_001349480 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr18-3226 chr18 47807210 47807420 + 5.66 0.000 Intergenic AluSz6|SINE|Alu 123344 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr2-13729 chr2 168155709 168155919 + 5.66 0.000 intron (NM_013233, intron 5 of 17) intron (NM_013233, intron 5 of 17) 91781 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr12-6885 chr12 21619533 21619743 + 5.66 0.000 Intergenic AluY|SINE|Alu -14791 NM_021957 2998 Hs.82614 NM_021957 ENSG00000111713 GYS2 - glycogen synthase 2 protein-coding chr11-3352 chr11 120952896 120953106 + 5.66 0.000 intron (NM_001282470, intron 14 of 19) intron (NM_001282470, intron 14 of 19) 5038 NR_133004 101929208 Hs.662310 NR_133004 LOC101929208 - uncharacterized LOC101929208 ncRNA chr11-7132 chr11 125686275 125686485 + 5.66 0.000 Intergenic MER31B|LTR|ERV1 -5533 NM_001612 56 Hs.169222 NM_001612 ENSG00000134940 ACRV1 D11S4365|SP-10|SPACA2 acrosomal vesicle protein 1 protein-coding chr5-7050 chr5 169267911 169268121 + 5.66 0.000 intron (NM_003062, intron 1 of 35) intron (NM_003062, intron 1 of 35) -4322 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr1-12476 chr1 18687104 18687314 + 5.66 0.000 intron (NM_001135254, intron 4 of 8) MIRc|SINE|MIR 56363 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr14-4545 chr14 43149011 43149221 + 5.66 0.000 Intergenic Intergenic 1358167 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chrX-1793 chrX 82699184 82699394 + 5.66 0.000 Intergenic AluSx3|SINE|Alu -809001 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr4-4518 chr4 65078372 65078582 + 5.66 0.000 Intergenic MER61-int|LTR|ERV1 -73977 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr12-8160 chr12 121460325 121460535 + 5.66 0.000 intron (NM_001005366, intron 12 of 22) AluJb|SINE|Alu -16078 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr5-3776 chr5 65837282 65837492 + 5.66 0.000 Intergenic MIRc|SINE|MIR -89167 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr2-10188 chr2 96618071 96618281 + 5.66 0.000 intron (NR_047658, intron 4 of 19) intron (NR_047658, intron 4 of 19) 19815 NR_047658 55683 Hs.516341 NM_017991 ENSG00000114982 KANSL3 KIAA1310|NSL3|Rcd1 KAT8 regulatory NSL complex subunit 3 protein-coding chr2-12024 chr2 28902372 28902582 + 5.66 0.000 intron (NM_015131, intron 2 of 17) LTR50|LTR|ERVL 7810 NM_015131 23160 Hs.622982 NM_015131 ENSG00000163811 WDR43 NET12|UTP5 WD repeat domain 43 protein-coding chr8-6277 chr8 42113708 42113918 + 5.66 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -39133 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr1-15023 chr1 93062310 93062520 + 5.66 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -16820 NM_001164393 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding chr19-3114 chr19 12896232 12896442 + 5.66 0.000 exon (NM_000159, exon 8 of 12) exon (NM_000159, exon 8 of 12) 5177 NM_013976 2639 Hs.532699 NM_000159 ENSG00000105607 GCDH ACAD5|GCD glutaryl-CoA dehydrogenase protein-coding chr7-9064 chr7 104094089 104094299 + 5.66 0.000 Intergenic Intergenic -104536 NM_005045 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr2-11701 chr2 9485779 9485989 + 5.66 0.000 intron (NM_001320858, intron 5 of 5) intron (NM_001320858, intron 5 of 5) 10829 NM_001320858 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr18-1949 chr18 36580553 36580763 + 5.66 0.000 intron (NM_001281740, intron 6 of 28) intron (NM_001281740, intron 6 of 28) 82760 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr17-6029 chr17 78809622 78809832 + 5.66 0.000 intron (NM_001321291, intron 13 of 20) AluJo|SINE|Alu -27385 NM_004762 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr7-7691 chr7 156049579 156049789 + 5.66 0.000 Intergenic Intergenic 87052 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr1-11944 chr1 65618420 65618630 + 5.66 0.000 intron (NM_001003679, intron 16 of 19) AluJb|SINE|Alu 92836 NM_001198689 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr2-14507 chr2 227777357 227777567 + 5.66 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -36380 NM_001130046 6364 Hs.75498 NM_004591 ENSG00000115009 CCL20 CKb4|Exodus|LARC|MIP-3-alpha|MIP-3a|MIP3A|SCYA20|ST38 C-C motif chemokine ligand 20 protein-coding chr10-4611 chr10 116188849 116189059 + 5.66 0.000 intron (NM_145793, intron 3 of 8) L1MB3|LINE|L1 5835 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr4-8562 chr4 166142535 166142745 + 5.66 0.000 Intergenic LSU-rRNA_Hsa|rRNA|rRNA 269403 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr7-5326 chr7 26940069 26940279 + 5.66 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -75584 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chrX-5065 chrX 124218983 124219193 + 5.66 0.000 Intergenic MIR|SINE|MIR -113572 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr10-8428 chr10 85663869 85664079 + 5.66 0.000 intron (NM_017551, intron 12 of 15) intron (NM_017551, intron 12 of 15) 86243 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr13-4175 chr13 88959978 88960188 + 5.66 0.000 Intergenic A-rich|Low_complexity|Low_complexity -275208 NR_047025 100874172 Hs.569291 NR_047025 LINC00440 - long intergenic non-protein coding RNA 440 ncRNA chr2-7177 chr2 205717891 205718101 + 5.66 0.000 intron (NM_018534, intron 3 of 15) intron (NM_018534, intron 3 of 15) 35495 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr14-4653 chr14 54866762 54866972 + 5.66 0.000 intron (NM_001024071, intron 1 of 5) intron (NM_001024071, intron 1 of 5) 11326 NR_036194 100422984 NR_036194 ENSG00000265432 MIR4308 - microRNA 4308 ncRNA chr9-4580 chr9 93545826 93546036 + 5.66 0.000 intron (NM_001286722, intron 11 of 17) AluSq2|SINE|Alu -30653 NM_005392 5253 Hs.211441 NM_005392 ENSG00000197724 PHF2 CENP-35|GRC5|JHDM1E|KDM7C PHD finger protein 2 protein-coding chr15-4675 chr15 65112459 65112669 + 5.66 0.000 Intergenic Intergenic -6205 NM_001163692 390595 Hs.659256 NM_001163692 ENSG00000246922 UBAP1L UBAP-1L ubiquitin associated protein 1 like protein-coding chr15-2659 chr15 75602483 75602693 + 5.66 0.000 intron (NM_001042581, intron 7 of 8) MER5B|DNA|hAT-Charlie 23137 NM_005701 10073 Hs.21577 NM_005701 ENSG00000169371 SNUPN KPNBL|RNUT1|Snurportin1 snurportin 1 protein-coding chr4-7844 chr4 101954094 101954304 + 5.66 0.000 intron (NM_017935, intron 7 of 16) MLT1C|LTR|ERVL-MaLR 140357 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr2-12373 chr2 52502140 52502350 + 5.66 0.000 Intergenic L1MCa|LINE|L1 131597 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr6-5726 chr6 144321203 144321413 + 5.66 0.000 intron (NM_007124, intron 1 of 73) MIR|SINE|MIR 29571 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chrX-5308 chrX 143544988 143545198 + 5.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -27618 NM_001009609 139067 Hs.447320 NM_001009609 ENSG00000189252 SPANXN3 CT11.8|SPANX-N3 SPANX family member N3 protein-coding chr10-7961 chr10 56864600 56864810 + 5.66 0.000 Intergenic LTR16A1|LTR|ERVL 439854 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr11-10408 chr11 114477890 114478100 + 5.66 0.000 Intergenic Intergenic 38528 NM_015523 25996 Hs.677190 NM_015523 ENSG00000076043 REXO2 CGI-114|REX2|RFN|SFN RNA exonuclease 2 protein-coding chr11-8783 chr11 10366868 10367078 + 5.66 0.000 intron (NR_103765, intron 2 of 3) intron (NR_103765, intron 2 of 3) 58660 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA chr11-7846 chr11 116305372 116305582 + 5.66 0.000 Intergenic LTR50|LTR|ERVL -333945 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr4-3441 chr4 86453615 86453825 + 5.66 0.000 promoter-TSS (NM_002753) promoter-TSS (NM_002753) -525 NM_002753 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr6-6881 chr6 11476888 11477098 + 5.66 0.000 Intergenic L2a|LINE|L2 -60756 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr11-10109 chr11 87097678 87097888 + 5.66 0.000 intron (NM_001168724, intron 4 of 13) L2a|LINE|L2 59849 NR_033149 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr1-12618 chr1 38018815 38019025 + 5.66 0.000 intron (NM_016037, intron 4 of 7) intron (NM_016037, intron 4 of 7) 6186 NM_016037 51118 Hs.472038 NM_016037 ENSG00000183520 UTP11 CGI-94|CGI94|UTP11L UTP11 small subunit processome component protein-coding chr3-10550 chr3 140750320 140750530 + 5.66 0.000 Intergenic L2a|LINE|L2 72361 NM_152616 287015 Hs.343487 NM_152616 ENSG00000155890 TRIM42 PPP1R40|T4A1 tripartite motif containing 42 protein-coding chr2-14517 chr2 228762259 228762469 + 5.66 0.000 Intergenic L1M1|LINE|L1 -150969 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr19-7039 chr19 50818343 50818553 + 5.66 0.000 TTS (NM_002257) TTS (NM_002257) 767 NR_038359 284365 Hs.161397 NR_038359 ENSG00000180279 LINC01869 - long intergenic non-protein coding RNA 1869 ncRNA chr11-8774 chr11 9626921 9627131 + 5.66 0.000 Intergenic L2a|LINE|L2 -37051 NM_015055 23075 Hs.153026 NM_015055 ENSG00000133789 SWAP70 HSPC321|SWAP-70 switching B cell complex subunit SWAP70 protein-coding chr2-13237 chr2 124980047 124980257 + 5.66 0.000 Intergenic Intergenic 954865 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr7-8765 chr7 78957938 78958148 + 5.66 0.000 intron (NM_001301128, intron 2 of 20) MamRTE1|LINE|RTE-BovB -50945 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr16-6528 chr16 63030217 63030427 + 5.66 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -993884 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chrX-1763 chrX 63670002 63670212 + 5.66 0.000 TTS (NR_138419) TTS (NR_138419) 1395 NR_138419 100874355 Hs.671524 NR_138419 ENSG00000231729 ARHGEF9-IT1 - ARHGEF9 intronic transcript 1 ncRNA chr22-2809 chr22 42956510 42956720 + 5.66 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 3241 NM_001349973 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr22-2548 chr22 26140018 26140228 + 5.66 0.000 Intergenic MIR3|SINE|MIR -29339 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chrX-5368 chrX 150258212 150258422 + 5.66 0.000 Intergenic Intergenic 30313 NR_031748 100313839 NR_031748 ENSG00000252454 MIR2114 - microRNA 2114 ncRNA chr7-8413 chr7 45884541 45884751 + 5.66 0.000 Intergenic Intergenic -3842 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding chr8-4493 chr8 119244946 119245156 + 5.66 0.000 3' UTR (NM_052886, exon 4 of 4) 3' UTR (NM_052886, exon 4 of 4) 1806 NR_149113 105375726 Hs.666095 NR_149111 MAL2-AS1 - MAL2 antisense RNA 1 ncRNA chr7-7995 chr7 16130375 16130585 + 5.66 0.000 intron (NM_001101426, intron 9 of 9) intron (NM_001101426, intron 9 of 9) -80006 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr3-8228 chr3 48322168 48322378 + 5.66 0.000 intron (NM_001080525, intron 1 of 4) L1MB8|LINE|L1 -5814 NR_031749 100313840 NR_031749 ENSG00000252466 MIR2115 - microRNA 2115 ncRNA chr16-3542 chr16 47000466 47000676 + 5.66 0.000 Intergenic SVA_D|Retroposon|SVA -26897 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr14-3688 chr14 101780893 101781103 + 5.66 0.000 intron (NM_001352915, intron 2 of 14) intron (NM_001352915, intron 2 of 14) 18628 NM_001352915 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr1-15833 chr1 179628461 179628671 + 5.66 0.000 intron (NM_001199091, intron 6 of 16) AluJr|SINE|Alu 22339 NM_001199092 163589 Hs.197354 NM_173533 ENSG00000162782 TDRD5 TUDOR3 tudor domain containing 5 protein-coding chr18-3531 chr18 75889633 75889843 + 5.66 0.000 Intergenic Intergenic -177335 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chrX-5187 chrX 133827547 133827757 + 5.66 0.000 intron (NM_001164619, intron 1 of 6) AluSz|SINE|Alu -69791 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr8-6072 chr8 26226110 26226320 + 5.66 0.000 Intergenic Intergenic -65293 NM_002717 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr3-8797 chr3 5671871 5672081 + 5.66 0.000 Intergenic Intergenic -421721 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr3-7510 chr3 170050141 170050351 + 5.66 0.000 intron (NM_014373, intron 2 of 3) AluSq|SINE|Alu 12251 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr2-3845 chr2 32293895 32294105 + 5.66 0.000 intron (NM_032312, intron 3 of 5) SVA_D|Retroposon|SVA 16096 NM_032312 84272 Hs.468099 NM_032312 ENSG00000119820 YIPF4 FinGER4|Nbla11189 Yip1 domain family member 4 protein-coding chr1-10652 chr1 182755244 182755454 + 5.66 0.000 Intergenic Intergenic -34100 NM_001200052 80896 Hs.496969 NM_030769 ENSG00000135838 NPL C112|C1orf13|NAL|NPL1 N-acetylneuraminate pyruvate lyase protein-coding chr2-9507 chr2 237061244 237061454 + 5.66 0.000 Intergenic Intergenic -5182 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr8-6951 chr8 105359597 105359807 + 5.66 0.000 intron (NM_001362837, intron 1 of 7) THE1C|LTR|ERVL-MaLR 40159 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding GL000225.1-70 GL000225.1 108579 108789 + 5.66 0.000 NA NA NA NA chr16-5990 chr16 5888864 5889074 + 5.66 0.000 Intergenic Intergenic -130055 NM_001142333 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr3-8457 chr3 122910132 122910342 + 5.66 0.000 exon (NM_001031702, exon 23 of 23) exon (NM_001031702, exon 23 of 23) 23724 NR_024618 100129550 Hs.61558 NR_024618 ENSG00000273033 LINC02035 - long intergenic non-protein coding RNA 2035 ncRNA chr2-6137 chr2 227681205 227681415 + 5.66 0.000 Intergenic Intergenic 25346 NM_001371412 chr18-3203 chr18 46358841 46359051 + 5.66 0.000 intron (NM_001256758, intron 1 of 5) intron (NM_001256758, intron 1 of 5) 24722 NR_046357 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chrX-4260 chrX 40074216 40074426 + 5.66 0.000 exon (NM_001123385, exon 4 of 15) exon (NM_001123385, exon 4 of 15) 23145 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr20-2386 chr20 18025957 18026167 + 5.66 0.000 intron (NM_001303461, intron 3 of 3) intron (NM_001303461, intron 3 of 3) 31854 NM_021220 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr10-7422 chr10 5467239 5467449 + 5.66 0.000 Intergenic Intergenic 20735 NM_005863 10276 Hs.25155 NM_005863 ENSG00000173848 NET1 ARHGEF8|NET1A neuroepithelial cell transforming 1 protein-coding chr6-7814 chr6 100451992 100452202 + 5.66 0.000 intron (NM_005068, intron 2 of 10) L2b|LINE|L2 11578 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr1-13450 chr1 3231545 3231755 + 5.66 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 103675 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr7-8675 chr7 72787979 72788189 + 5.66 0.000 intron (NM_001145440, intron 6 of 13) AluY|SINE|Alu 40116 NM_001145440 441250 Hs.488614 NM_001145440 ENSG00000277149 TYW1B LINC00069|NCRNA00069|RSAFD2 tRNA-yW synthesizing protein 1 homolog B protein-coding chr7-6009 chr7 104845916 104846126 + 5.66 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) -41929 NR_034141 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr4-6273 chr4 78727071 78727281 + 5.66 0.000 Intergenic AluSg4|SINE|Alu -49174 NM_017593 55589 Hs.146551 NM_017593 ENSG00000138756 BMP2K BIKE|HRIHFB2017 BMP2 inducible kinase protein-coding chr5-8341 chr5 119321689 119321899 + 5.66 0.000 intron (NM_001286815, intron 2 of 2) L2a|LINE|L2 -11381 NM_001286814 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr20-2474 chr20 32406616 32406826 + 5.66 0.000 intron (NM_015338, intron 3 of 11) intron (NM_015338, intron 3 of 11) 47656 NM_001363734 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chr8-5740 chr8 139393443 139393653 + 5.66 0.000 Intergenic AluSx1|SINE|Alu 309575 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr5-4694 chr5 39554134 39554344 + 5.66 0.000 Intergenic Intergenic 33808 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr9-8725 chr9 132051323 132051533 + 5.66 0.000 intron (NM_001253881, intron 2 of 6) intron (NM_001253881, intron 2 of 6) 28439 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr3-3414 chr3 95637529 95637739 + 5.66 0.000 Intergenic Intergenic 45559 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr1-14291 chr1 38250444 38250654 + 5.66 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -35782 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA chr17-7340 chr17 6204697 6204907 + 5.66 0.000 Intergenic AluSc|SINE|Alu 134188 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr8-6189 chr8 34435978 34436188 + 5.66 0.000 Intergenic L1PB1|LINE|L1 -347838 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr19-6345 chr19 11042182 11042392 + 5.66 0.000 intron (NM_001128846, intron 28 of 32) intron (NM_001128846, intron 28 of 32) -47075 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr12-4371 chr12 4155727 4155937 + 5.66 0.000 Intergenic AluSc|SINE|Alu -117930 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chr16-6783 chr16 77605167 77605377 + 5.66 0.000 Intergenic LTR16A1|LTR|ERVL -117220 NM_001243661 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr5-8637 chr5 139816879 139817089 + 5.66 0.000 intron (NM_032289, intron 4 of 14) intron (NM_032289, intron 4 of 14) 21176 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr1-14903 chr1 83251240 83251450 + 5.66 0.000 Intergenic L1ME2|LINE|L1 -194709 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr10-5940 chr10 121611576 121611786 + 5.66 0.000 Intergenic Intergenic -13223 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr5-8200 chr5 106874526 106874736 + 5.66 0.000 intron (NR_104671, intron 2 of 3) HERVL18-int|LTR|ERVL 136383 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr6-3448 chr6 149475073 149475283 + 5.66 0.000 intron (NM_207360, intron 1 of 5) MLT1B|LTR|ERVL-MaLR 9836 NM_207360 340152 Hs.632618 NM_207360 ENSG00000178199 ZC3H12D C6orf95|MCPIP4|TFL|dJ281H8.1|p34 zinc finger CCCH-type containing 12D protein-coding chr1-16314 chr1 216685407 216685617 + 5.66 0.000 intron (NM_001134285, intron 3 of 8) intron (NM_001134285, intron 3 of 8) 37917 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr1-14972 chr1 89281569 89281779 + 5.66 0.000 Intergenic Intergenic 8688 NR_077244 729930 Hs.745054 NR_077244 LOC729930 - chromosome 11 open reading frame 74 pseudogene pseudo chrX-2575 chrX 103376387 103376597 + 5.66 0.000 promoter-TSS (NM_014380) promoter-TSS (NM_014380) 169 NM_206915 27018 Hs.448588 NM_014380 ENSG00000166681 BEX3 Bex|DXS6984E|HGR74|NADE|NGFRAP1 brain expressed X-linked 3 protein-coding chr11-9991 chr11 78653122 78653332 + 5.66 0.000 3' UTR (NM_001098816, exon 34 of 34) 3' UTR (NM_001098816, exon 34 of 34) -78363 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr11-10000 chr11 79388766 79388976 + 5.66 0.000 intron (NM_001098816, intron 1 of 33) L2c|LINE|L2 13238 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr4-5951 chr4 158496979 158497189 + 5.66 0.000 Intergenic L2|LINE|L2 -24630 NM_001363776 59350 Hs.591686 NM_021634 ENSG00000171509 RXFP1 LGR7|RXFPR1 relaxin family peptide receptor 1 protein-coding chrX-1586 chrX 79264375 79264585 + 5.66 0.000 Intergenic AluSz|SINE|Alu 93508 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr10-8529 chr10 92734434 92734644 + 5.66 0.000 Intergenic Intergenic 44584 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr7-9267 chr7 124276733 124276943 + 5.66 0.000 Intergenic Intergenic 75258 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr1-12027 chr1 107861998 107862208 + 5.66 0.000 intron (NM_006113, intron 2 of 26) intron (NM_006113, intron 2 of 26) -35120 NR_107006 102465839 NR_107006 ENSG00000275455 MIR7852 hsa-mir-7852 microRNA 7852 ncRNA chr16-4528 chr16 63018721 63018931 + 5.66 0.000 Intergenic Intergenic -982388 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chrX-4039 chrX 17897479 17897689 + 5.66 0.000 Intergenic MER45A|DNA|hAT-Tip100 -36247 NM_001172743 10742 Hs.446680 NM_021785 ENSG00000131831 RAI2 - retinoic acid induced 2 protein-coding chr5-3867 chr5 136891359 136891569 + 5.66 0.000 Intergenic Intergenic -236733 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr5-8372 chr5 122479076 122479286 + 5.66 0.000 promoter-TSS (NR_051996) promoter-TSS (NR_051996) -94 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA chr12-6693 chr12 3968918 3969128 + 5.66 0.000 Intergenic Intergenic -95575 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr22-2590 chr22 30217998 30218208 + 5.66 0.000 Intergenic Intergenic -21091 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr10-6641 chr10 101023983 101024193 + 5.66 0.000 intron (NM_001351044, intron 2 of 9) intron (NM_001351044, intron 2 of 9) 7041 NM_001195263 79955 Hs.438245 NM_024895 ENSG00000186862 PDZD7 DFNB57|PDZK7 PDZ domain containing 7 protein-coding chr17-3670 chr17 9239973 9240183 + 5.66 0.000 3' UTR (NM_004822, exon 7 of 7) 3' UTR (NM_004822, exon 7 of 7) -60960 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr5-7515 chr5 36367792 36368002 + 5.66 0.000 Intergenic L2|LINE|L2 -65995 NM_001323273 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr11-5860 chr11 9923007 9923217 + 5.66 0.000 intron (NR_120539, intron 2 of 2) LTR36|LTR|ERV1 83970 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr16-4704 chr16 81873625 81873835 + 5.66 0.000 intron (NM_002661, intron 7 of 32) AluJo|SINE|Alu 94439 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr19-6747 chr19 39183942 39184152 + 5.66 0.000 Intergenic AluSq2|SINE|Alu -12917 NM_001001414 342897 Hs.726934 NM_001001414 ENSG00000188505 NCCRP1 FBXO50|NCCRP-1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) protein-coding chr5-3243 chr5 95878873 95879083 + 5.66 0.000 Intergenic Intergenic 26746 NR_026936 202299 Hs.8373 NM_175616 ENSG00000236882 LINC01554 C5orf27|FIS long intergenic non-protein coding RNA 1554 ncRNA chr5-6854 chr5 117897035 117897245 + 5.66 0.000 intron (NR_104997, intron 1 of 2) L1MC1|LINE|L1 166779 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr8-6340 chr8 51429074 51429284 + 5.66 0.000 intron (NM_144651, intron 12 of 22) L1MD|LINE|L1 380266 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr1-13303 chr1 234579374 234579584 + 5.66 0.000 Intergenic Intergenic 30046 NM_001077397 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr6-7711 chr6 88463462 88463672 + 5.66 0.000 Intergenic MamRTE1|LINE|RTE-BovB 75802 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chrX-1210 chrX 71919579 71919789 + 5.66 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) 8596 NM_001013627 340527 Hs.397836 NM_001013627 ENSG00000204131 NHSL2 - NHS like 2 protein-coding chr11-8878 chr11 14270032 14270242 + 5.66 0.000 Intergenic Intergenic 88348 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr5-8545 chr5 135737894 135738104 + 5.66 0.000 intron (NM_001349335, intron 3 of 10) intron (NM_001349335, intron 3 of 10) 65076 NR_049867 100847082 NR_049867 ENSG00000265924 MIR5692C1 - microRNA 5692c-1 ncRNA chr11-10669 chr11 127700517 127700727 + 5.66 0.000 Intergenic LTR1B0|LTR|ERV1 429552 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr10-8435 chr10 86002393 86002603 + 5.66 0.000 intron (NM_017551, intron 4 of 15) Tigger11a|DNA|TcMar-Tigger 262290 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr2-14398 chr2 220033233 220033443 + 5.66 0.000 Intergenic LTR16|LTR|ERVL -126773 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr14-4604 chr14 51716674 51716884 + 5.66 0.000 promoter-TSS (NM_001267047) promoter-TSS (NM_001267047) -504 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr19-6985 chr19 48680516 48680726 + 5.66 0.000 non-coding (NR_004401, exon 5 of 5) non-coding (NR_004401, exon 5 of 5) -7540 NM_145807 126147 Hs.326217 NM_145807 ENSG00000142233 NTN5 - netrin 5 protein-coding chr8-6368 chr8 53339924 53340134 + 5.66 0.000 Intergenic L1PA3|LINE|L1 -88332 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr10-2445 chr10 9273122 9273332 + 5.66 0.000 intron (NR_120635, intron 3 of 4) SVA_B|Retroposon|SVA -2386 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chrX-3496 chrX 39825505 39825715 + 5.66 0.000 Intergenic LTR16B1|LTR|ERVL -11951 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr9-6981 chr9 109199881 109200091 + 5.66 0.000 intron (NM_019114, intron 20 of 25) MLT1F2|LTR|ERVL-MaLR -32695 NM_014334 23732 Hs.347537 NM_014334 ENSG00000260230 FRRS1L C9orf4|CG-6|CG6|EIEE37 ferric chelate reductase 1 like protein-coding chr6-7398 chr6 51148922 51149132 + 5.66 0.000 Intergenic Intergenic 330156 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr1-5521 chr1 201300247 201300457 + 5.66 0.000 intron (NM_001005337, intron 2 of 13) intron (NM_001005337, intron 2 of 13) 16846 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr19-4771 chr19 31847978 31848188 + 5.66 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -177779 NR_110674 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA chr9-8720 chr9 131802359 131802569 + 5.66 0.000 Intergenic MSTD|LTR|ERVL-MaLR -62520 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr12-4430 chr12 9743206 9743416 + 5.66 0.000 Intergenic Intergenic -10012 NM_172004 160365 Hs.560087 NM_172004 ENSG00000184293 CLECL1 DCAL-1|DCAL1 C-type lectin like 1 protein-coding chr3-10344 chr3 127544190 127544400 + 5.66 0.000 Intergenic Intergenic -6515 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr12-6853 chr12 16112740 16112950 + 5.66 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 164840 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding chr5-9026 chr5 168034688 168034898 + 5.66 0.000 intron (NM_001080428, intron 3 of 24) AluJr|SINE|Alu -131052 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr14-4285 chr14 19861133 19861343 + 5.66 0.000 Intergenic L1MA4|LINE|L1 7935 NR_145507 283617 NM_001348266 ENSG00000176290 OR4K3 OR14-10|OR4K3P olfactory receptor family 4 subfamily K member 3 (gene/pseudogene) protein-coding chr7-8912 chr7 94407793 94408003 + 5.66 0.000 intron (NM_000089, intron 13 of 51) intron (NM_000089, intron 13 of 51) 13337 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr2-6610 chr2 237120023 237120233 + 5.66 0.000 Intergenic Intergenic 34239 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr12-5079 chr12 93409747 93409957 + 5.66 0.000 3' UTR (NM_003348, exon 4 of 4) 3' UTR (NM_003348, exon 4 of 4) 31274 NM_001301024 11163 Hs.506325 NM_019094 ENSG00000173598 NUDT4 DIPP-2B|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P|NUDT4B nudix hydrolase 4 protein-coding chr6-5929 chr6 68690515 68690725 + 5.66 0.000 intron (NM_001704, intron 3 of 31) MIRb|SINE|MIR 55338 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr1-16705 chr1 246650536 246650746 + 5.66 0.000 intron (NM_152609, intron 9 of 10) intron (NM_152609, intron 9 of 10) -73768 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr3-10092 chr3 109797074 109797284 + 5.66 0.000 Intergenic L1PA7|LINE|L1 194351 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr14-4449 chr14 33475651 33475861 + 5.66 0.000 intron (NM_001165893, intron 3 of 10) intron (NM_001165893, intron 3 of 10) -233181 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr1-10617 chr1 179040645 179040855 + 5.66 0.000 intron (NM_001324311, intron 1 of 7) SVA_D|Retroposon|SVA 14626 NM_001324311 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chrX-1943 chrX 4163690 4163900 + 5.66 0.000 Intergenic L1PA16|LINE|L1 -243053 NR_146579 729162 Hs.657302 NR_146578 FAM239B - zinc finger protein 839 pseudogene pseudo chr1-15590 chr1 160627200 160627410 + 5.66 0.000 intron (NM_001330754, intron 3 of 7) intron (NM_001330754, intron 3 of 7) 19739 NR_104401 6504 Hs.523660 NM_003037 ENSG00000117090 SLAMF1 CD150|CDw150|SLAM signaling lymphocytic activation molecule family member 1 protein-coding chr5-7723 chr5 58845320 58845530 + 5.66 0.000 intron (NM_138453, intron 4 of 4) L3b|LINE|CR1 154473 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-13664 chr2 162470772 162470982 + 5.66 0.000 intron (NM_033272, intron 6 of 15) SVA_D|Retroposon|SVA 126509 NM_001330271 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr16-6724 chr16 72798039 72798249 + 5.66 0.000 exon (NM_006885, exon 9 of 10) exon (NM_006885, exon 9 of 10) -133174 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr3-9716 chr3 66658496 66658706 + 5.66 0.000 Intergenic Intergenic 79735 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr3-4802 chr3 126664702 126664912 + 5.66 0.000 intron (NR_034158, intron 2 of 4) intron (NR_034158, intron 2 of 4) 2726 NR_034158 255330 Hs.145435 NM_174935 ENSG00000198284 NUP210P1 C3orf46 nucleoporin 210 pseudogene 1 pseudo chr9-8406 chr9 120093730 120093940 + 5.66 0.000 Intergenic ERVL-E-int|LTR|ERVL 151215 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr1-13735 chr1 15934657 15934867 + 5.66 0.000 exon (NM_015001, exon 11 of 15) exon (NM_015001, exon 11 of 15) 41370 NM_001287603 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr14-4510 chr14 38401721 38401931 + 5.66 0.000 Intergenic Intergenic -145733 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr5-6303 chr5 121515326 121515536 + 5.66 0.000 Intergenic L1MA7|LINE|L1 192881 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr16-5368 chr16 86107032 86107242 + 5.66 0.000 Intergenic L2a|LINE|L2 -89044 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr7-8370 chr7 44293793 44294003 + 5.66 0.000 intron (NM_172081, intron 1 of 18) intron (NM_172081, intron 1 of 18) 31696 NM_172084 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr3-10010 chr3 100756175 100756385 + 5.66 0.000 intron (NM_001349332, intron 31 of 35) AluSp|SINE|Alu 46738 NM_001195478 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr4-4270 chr4 23294554 23294764 + 5.66 0.000 Intergenic LTR33|LTR|ERVL 580570 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr17-5414 chr17 34660302 34660512 + 5.66 0.000 Intergenic Intergenic 79658 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr1-15119 chr1 101840644 101840854 + 5.66 0.000 intron (NM_058170, intron 1 of 5) intron (NM_058170, intron 1 of 5) 6331 NM_001288821 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr7-6687 chr7 158080473 158080683 + 5.66 0.000 intron (NM_130843, intron 10 of 21) intron (NM_130843, intron 10 of 21) 225993 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr19-6761 chr19 39717347 39717557 + 5.66 0.000 Intergenic L1PA4|LINE|L1 12971 NM_020129 56891 Hs.24236 NM_020129 ENSG00000006659 LGALS14 CLC2|PPL13 galectin 14 protein-coding chr20-4104 chr20 40943824 40944034 + 5.66 0.000 Intergenic Intergenic -36784 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr8-2389 chr8 52994307 52994517 + 5.66 0.000 Intergenic LTR54B|LTR|ERV1 54504 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr14-5234 chr14 98804022 98804232 + 5.66 0.000 Intergenic Intergenic 92514 NR_161368 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr5-8669 chr5 140603014 140603224 + 5.66 0.000 Intergenic L1MB5|LINE|L1 30056 NM_000591 929 Hs.163867 NM_000591 ENSG00000170458 CD14 - CD14 molecule protein-coding chr20-2953 chr20 30815392 30815602 + 5.66 0.000 Intergenic Intergenic -412035 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 MLLT10 pseudogene 1 pseudo chr15-4113 chr15 78434022 78434232 + 5.66 0.000 Intergenic MamTip3|DNA|hAT-Tip100 -3304 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr18-3427 chr18 63904391 63904601 + 5.66 0.000 TTS (NM_001143818) TTS (NM_001143818) -3462 NM_005024 5273 Hs.158339 NM_005024 ENSG00000242550 SERPINB10 PI-10|PI10 serpin family B member 10 protein-coding chr6-6365 chr6 66495391 66495601 + 5.66 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 707617 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr7-4634 chr7 29137166 29137376 + 5.66 0.000 intron (NM_001371261, intron 2 of 13) LTR9D|LTR|ERV1 9266 NM_019029 54504 Hs.233389 NM_019029 ENSG00000106066 CPVL HVLP carboxypeptidase vitellogenic like protein-coding chr15-4610 chr15 61034263 61034473 + 5.66 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 194934 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr17-5433 chr17 38845490 38845700 + 5.66 0.000 Intergenic AluSg4|SINE|Alu -4206 NM_001080465 388381 Hs.250182 NM_001080465 ENSG00000275489 C17orf98 - chromosome 17 open reading frame 98 protein-coding chr3-8071 chr3 9942399 9942609 + 5.66 0.000 intron (NM_001077415, intron 7 of 10) MLT1J2|LTR|ERVL-MaLR -4900 NR_046734 100874032 Hs.616388 NR_046734 ENSG00000230082 PRRT3-AS1 - PRRT3 antisense RNA 1 ncRNA chr7-4481 chr7 139949898 139950108 + 5.66 0.000 intron (NM_001366537, intron 4 of 11) L3|LINE|CR1 113718 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr20-2754 chr20 50959796 50960006 + 5.66 0.000 exon (NM_014484, exon 1 of 1) exon (NM_014484, exon 1 of 1) 1083 NM_014484 27304 Hs.159410 NM_014484 ENSG00000124217 MOCS3 UBA4 molybdenum cofactor synthesis 3 protein-coding chr8-4848 chr8 35154139 35154349 + 5.66 0.000 Intergenic Intergenic -81231 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr3-10771 chr3 157263041 157263251 + 5.66 0.000 intron (NM_024621, intron 13 of 13) intron (NM_024621, intron 13 of 13) -102386 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr12-7691 chr12 89769455 89769665 + 5.66 0.000 Intergenic ERVL-B4-int|LTR|ERVL -60194 NM_001366526 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr2-10821 chr2 53424640 53424850 + 5.66 0.000 Intergenic L1PA15|LINE|L1 -343038 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr17-6649 chr17 68132642 68132852 + 5.66 0.000 non-coding (NR_027418, exon 6 of 6) non-coding (NR_027418, exon 6 of 6) 31192 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr4-6737 chr4 4741066 4741276 + 5.66 0.000 Intergenic LTR33A_|LTR|ERVL -20589 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr2-10350 chr2 164361566 164361776 + 5.66 0.000 Intergenic L2a|LINE|L2 206824 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr7-7367 chr7 57358384 57358594 + 5.66 0.000 Intergenic Intergenic -46278 NR_120505 100653233 Hs.127379 NR_120505 ENSG00000260653 LOC100653233 - uncharacterized LOC100653233 ncRNA chr19-4545 chr19 10184240 10184450 + 5.66 0.000 intron (NM_001379, intron 1 of 39) intron (NM_001379, intron 1 of 39) 10608 NM_001318730 1786 Hs.202672 NM_001379 ENSG00000130816 DNMT1 ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT|m.HsaI DNA methyltransferase 1 protein-coding chr3-9751 chr3 69294918 69295128 + 5.66 0.000 intron (NM_015123, intron 4 of 22) intron (NM_015123, intron 4 of 22) 91065 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr5-8658 chr5 140253581 140253791 + 5.66 0.000 intron (NM_002622, intron 3 of 3) intron (NM_002622, intron 3 of 3) 49415 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr11-6690 chr11 77316279 77316489 + 5.66 0.000 Intergenic Intergenic -14718 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr11-7396 chr11 84906979 84907189 + 5.66 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) 16337 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-4276 chr9 107396599 107396809 + 5.66 0.000 Intergenic AluSx|SINE|Alu 69881 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr4-4934 chr4 124828521 124828731 + 5.66 0.000 Intergenic Intergenic -115894 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr10-7887 chr10 49366681 49366891 + 5.66 0.000 intron (NM_001276451, intron 6 of 6) MER119|DNA|hAT-Charlie 29303 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding chr13-3574 chr13 26758761 26758971 + 5.66 0.000 exon (NM_005288, exon 2 of 2) exon (NM_005288, exon 2 of 2) 1920 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chrX-4050 chrX 18699090 18699300 + 5.66 0.000 intron (NM_152226, intron 2 of 17) intron (NM_152226, intron 2 of 17) -6508 NR_046642 100874004 NR_046642 PPEF1-AS1 - PPEF1 antisense RNA 1 ncRNA chr8-7489 chr8 142766491 142766701 + 5.66 0.000 intron (NM_023946, intron 3 of 4) intron (NM_023946, intron 3 of 4) 3232 NM_001356372 432355 Hs.158665 NM_177458 ENSG00000283992 SLURP2 SLURP-2 secreted LY6/PLAUR domain containing 2 protein-coding chr10-8852 chr10 111123186 111123396 + 5.66 0.000 Intergenic Intergenic 9000 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr14-5408 chr14 104298716 104298926 + 5.66 0.000 Intergenic Intergenic 75237 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr10-9167 chr10 129712572 129712782 + 5.66 0.000 intron (NM_002412, intron 3 of 4) intron (NM_002412, intron 3 of 4) 130697 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr1-14915 chr1 84572836 84573046 + 5.66 0.000 intron (NM_004388, intron 1 of 6) AluSx1|SINE|Alu 1499 NM_004388 1486 Hs.513557 NM_004388 ENSG00000117151 CTBS CTB chitobiase protein-coding chr18-2591 chr18 14085870 14086080 + 5.66 0.000 intron (NR_033354, intron 1 of 5) L1M3e|LINE|L1 46460 NM_145287 162655 Hs.352635 NM_145287 ENSG00000175322 ZNF519 HsT2362 zinc finger protein 519 protein-coding chr17-6481 chr17 20700541 20700751 + 5.66 0.000 Intergenic L1ME3|LINE|L1 -11800 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr5-9067 chr5 171025057 171025267 + 5.66 0.000 intron (NM_022897, intron 14 of 27) L2b|LINE|L2 163144 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chrX-2275 chrX 49884354 49884564 + 5.66 0.000 Intergenic Intergenic 4975 NM_001145073 389856 Hs.143587 NM_001145073 ENSG00000273820 USP27X MRX105|USP22L|USP27 ubiquitin specific peptidase 27 X-linked protein-coding chr4-7533 chr4 75877987 75878197 + 5.66 0.000 intron (NM_006239, intron 10 of 16) intron (NM_006239, intron 10 of 16) 24360 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr6-5806 chr6 14073974 14074184 + 5.66 0.000 Intergenic AluSz6|SINE|Alu -43177 NM_001251901 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr4-8705 chr4 182417944 182418154 + 5.66 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 174647 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr10-8260 chr10 75628968 75629178 + 5.66 0.000 intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) -18436 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr22-2796 chr22 42571113 42571323 + 5.66 0.000 non-coding (NR_104300, exon 9 of 11) non-coding (NR_104300, exon 9 of 11) 10793 NR_002184 91695 Hs.534041 NR_002184 ENSG00000182841 RRP7BP RRP7B|dJ222E13.2 ribosomal RNA processing 7 homolog B, pseudogene pseudo chr6-8191 chr6 133510274 133510484 + 5.66 0.000 intron (NR_109982, intron 6 of 8) intron (NR_109982, intron 6 of 8) 268880 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr11-6586 chr11 72549385 72549595 + 5.66 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -21166 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr19-6322 chr19 10282908 10283118 + 5.66 0.000 intron (NM_000201, intron 2 of 6) AluSz|SINE|Alu -3942 NM_001039132 3386 Hs.706750 NM_001544 ENSG00000105371 ICAM4 CD242|LW intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) protein-coding chr6-6250 chr6 33782507 33782717 + 5.66 0.000 intron (NM_181336, intron 3 of 8) L2b|LINE|L2 4330 NM_001143944 221496 Hs.444845 NM_181336 ENSG00000161904 LEMD2 CTRCT42|LEM2|NET25|dJ482C21.1 LEM domain containing 2 protein-coding chr2-12410 chr2 55553233 55553443 + 5.66 0.000 intron (NM_020463, intron 14 of 14) intron (NM_020463, intron 14 of 14) 33743 NM_080667 112942 Hs.264208 NM_080667 ENSG00000163001 CFAP36 BARTL1|CCDC104 cilia and flagella associated protein 36 protein-coding chr7-9620 chr7 149791053 149791263 + 5.66 0.000 non-coding (NR_163594, exon 31 of 103) non-coding (NR_163594, exon 31 of 103) 15116 NR_163594 23145 Hs.632022 NR_163594 ENSG00000197558 SSPO - SCO-spondin pseudo chr2-14588 chr2 232374882 232375092 + 5.66 0.000 Intergenic L1ME3B|LINE|L1 -3764 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr3-10152 chr3 115245443 115245653 + 5.66 0.000 Intergenic Intergenic -98260 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr7-9356 chr7 129606208 129606418 + 5.66 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -5407 NM_001293163 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr15-5052 chr15 84813786 84813996 + 5.66 0.000 Intergenic L2c|LINE|L2 -2789 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 CMH27|MAK|MIDORI alpha kinase 3 protein-coding chr4-6981 chr4 21735994 21736204 + 5.66 0.000 intron (NM_147182, intron 2 of 8) MLT1I|LTR|ERVL-MaLR -38404 NM_001035003 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr21-1398 chr21 44471841 44472051 + 5.66 0.000 Intergenic MER4E1|LTR|ERV1 -13625 NR_155204 111216286 Hs.572852 NR_155204 LINC02575 - long intergenic non-protein coding RNA 2575 ncRNA chr7-5752 chr7 74566774 74566984 + 5.66 0.000 intron (NM_016328, intron 22 of 26) intron (NM_016328, intron 22 of 26) -29089 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr7-8600 chr7 66963432 66963642 + 5.66 0.000 Intergenic AluSx1|SINE|Alu 32049 NM_016038 51119 Hs.110445 NM_016038 ENSG00000126524 SBDS CGI-97|SDS|SWDS SBDS ribosome maturation factor protein-coding chr10-4518 chr10 91603770 91603980 + 5.66 0.000 intron (NR_024467, intron 1 of 4) L2b|LINE|L2 7585 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr16-6410 chr16 55440622 55440832 + 5.66 0.000 intron (NR_147198, intron 4 of 6) MamRep38|DNA|hAT 21570 NR_147198 107984884 Hs.666473 NR_147198 MMP2-AS1 - MMP2 antisense RNA 1 ncRNA chrX-4288 chrX 42369416 42369626 + 5.66 0.000 Intergenic LTR16C|LTR|ERVL 408642 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr4-4795 chr4 103466226 103466436 + 5.66 0.000 Intergenic MER4D1|LTR|ERV1 41289 NR_125925 101929448 Hs.570839 NR_125925 ENSG00000248740 LINC02428 - long intergenic non-protein coding RNA 2428 ncRNA chr11-9405 chr11 58068801 58069011 + 5.66 0.000 intron (NM_001005212, intron 2 of 2) intron (NM_001005212, intron 2 of 2) 37953 NM_001005186 219952 Hs.690432 NM_001005186 ENSG00000279051 OR6Q1 OR11-226 olfactory receptor family 6 subfamily Q member 1 (gene/pseudogene) protein-coding chr21-1566 chr21 13848610 13848820 + 5.66 0.000 promoter-TSS (NR_026755) promoter-TSS (NR_026755) -351 NR_026755 54055 Hs.580910 NR_026755 ENSG00000228314 CYP4F29P 4F-se4[6:7:8]|C21orf15|CYP4F-se4[6:7:8]|CYP4F3LP cytochrome P450 family 4 subfamily F member 29, pseudogene pseudo chr7-5835 chr7 86607199 86607409 + 5.66 0.000 Intergenic L1MEf|LINE|L1 -36605 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chr11-10696 chr11 129398702 129398912 + 5.66 0.000 intron (NM_003658, intron 1 of 3) intron (NM_003658, intron 1 of 3) 22959 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr12-7874 chr12 105342621 105342831 + 5.66 0.000 intron (NM_001145199, intron 1 of 5) MER21C|LTR|ERVL 12035 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr2-11471 chr2 231832150 231832360 + 5.66 0.000 Intergenic MER20|DNA|hAT-Charlie 45810 NM_022730 64708 Hs.335061 NM_022730 ENSG00000144524 COPS7B CSN7B|SGN7b COP9 signalosome subunit 7B protein-coding chr1-13199 chr1 207971947 207972157 + 5.66 0.000 Intergenic Intergenic -60927 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr1-16021 chr1 200066193 200066403 + 5.66 0.000 intron (NM_205860, intron 5 of 7) L2a|LINE|L2 23473 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chrX-4775 chrX 96800864 96801074 + 5.66 0.000 intron (NM_007309, intron 4 of 26) intron (NM_007309, intron 4 of 26) -82939 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr15-4418 chr15 44593087 44593297 + 5.66 0.000 intron (NM_025137, intron 26 of 39) intron (NM_025137, intron 26 of 39) 56045 NM_003758 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr1-14624 chr1 55932361 55932571 + 5.66 0.000 intron (NR_147162, intron 1 of 2) intron (NR_147162, intron 1 of 2) 12497 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr1-6059 chr1 90301892 90302102 + 5.66 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 306887 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr3-9849 chr3 79411623 79411833 + 5.66 0.000 promoter-TSS (NR_110133) promoter-TSS (NR_110133) 1 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr12-6277 chr12 47447647 47447857 + 5.66 0.000 Intergenic HERVK9-int|LTR|ERVK 32744 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr11-8425 chr11 106342522 106342732 + 5.66 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 91220 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr8-7130 chr8 120716394 120716604 + 5.66 0.000 intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) -44754 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr5-7853 chr5 72167402 72167612 + 5.66 0.000 intron (NM_005909, intron 2 of 6) intron (NM_005909, intron 2 of 6) -1960 NR_039967 100616377 NR_039967 ENSG00000264099 MIR4803 - microRNA 4803 ncRNA chr17-5195 chr17 14231208 14231418 + 5.66 0.000 Intergenic Tigger7|DNA|TcMar-Tigger 5549 NM_001348781 146822 Hs.447556 NM_001007530 ENSG00000223510 CDRT15 - CMT1A duplicated region transcript 15 protein-coding chr8-5645 chr8 109026061 109026271 + 5.66 0.000 Intergenic Intergenic -60462 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr17-6666 chr17 75228352 75228562 + 5.66 0.000 intron (NM_001303276, intron 10 of 17) intron (NM_001303276, intron 10 of 17) 22778 NM_024844 79902 Hs.362817 NM_024844 ENSG00000125450 NUP85 FROUNT|NPHS17|Nup75 nucleoporin 85 protein-coding chr4-8284 chr4 142322902 142323112 + 5.66 0.000 intron (NM_001331040, intron 7 of 25) intron (NM_001331040, intron 7 of 25) 523528 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr17-6793 chr17 5099107 5099317 + 5.66 0.000 Intergenic AluSx|SINE|Alu -12723 NR_135658 101928000 Hs.660048 NR_135657 ENSG00000234327 LOC101928000 - uncharacterized LOC101928000 ncRNA chr3-8772 chr3 4041385 4041595 + 5.66 0.000 Intergenic Intergenic -240615 NR_149025 100130207 Hs.587205 NR_149025 ENSG00000144455 LOC100130207 - uncharacterized LOC100130207 ncRNA chr14-2995 chr14 52369410 52369620 + 5.66 0.000 Intergenic Intergenic 55203 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chr19-6632 chr19 31612127 31612337 + 5.66 0.000 Intergenic Intergenic 19951 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr22-3445 chr22 41176372 41176582 + 5.66 0.000 exon (NM_001362843, exon 29 of 30) exon (NM_001362843, exon 29 of 30) 21024 NR_110514 101927279 Hs.517517 NR_110514 EP300-AS1 - EP300 antisense RNA 1 ncRNA chr5-2498 chr5 150194749 150194959 + 5.66 0.000 exon (NM_014228, exon 2 of 14) exon (NM_014228, exon 2 of 14) 4792 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr7-8222 chr7 33361331 33361541 + 5.66 0.000 intron (NM_198428, intron 16 of 22) L1M2a|LINE|L1 231872 NM_001348040 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chrX-4898 chrX 107477678 107477888 + 5.66 0.000 Intergenic Intergenic -44667 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr1-9015 chr1 11311909 11312119 + 5.66 0.000 Intergenic MIR3|SINE|MIR 38816 NM_013319 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr11-10303 chr11 107252768 107252978 + 5.66 0.000 Intergenic MER21-int|LTR|ERVL 204973 NM_152434 143884 Hs.212140 NM_152434 ENSG00000152404 CWF19L2 - CWF19 like cell cycle control factor 2 protein-coding chr17-8590 chr17 80482544 80482754 + 5.66 0.000 Intergenic L2c|LINE|L2 -6042 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr4-6950 chr4 18241652 18241862 + 5.66 0.000 Intergenic L1PA16|LINE|L1 -219882 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr4-5735 chr4 52892719 52892929 + 5.66 0.000 intron (NM_152540, intron 7 of 8) intron (NM_152540, intron 7 of 8) 30507 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr11-8755 chr11 9027697 9027907 + 5.66 0.000 intron (NM_001367977, intron 19 of 22) intron (NM_001367977, intron 19 of 22) -23801 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chr11-7349 chr11 66819716 66819926 + 5.66 0.000 intron (NM_024650, intron 11 of 16) AluSq2|SINE|Alu -23620 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr13-2514 chr13 59483027 59483237 + 5.66 0.000 Intergenic MLT2A2|LTR|ERVL -529586 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr10-7563 chr10 16922567 16922777 + 5.66 0.000 intron (NM_001081, intron 43 of 66) intron (NM_001081, intron 43 of 66) -105218 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr19-6518 chr19 18599412 18599622 + 5.66 0.000 intron (NM_004750, intron 2 of 8) intron (NM_004750, intron 2 of 8) 7282 NM_004750 9244 Hs.114948 NM_004750 ENSG00000006016 CRLF1 CISS|CISS1|CLF|CLF-1|NR6|zcytor5 cytokine receptor like factor 1 protein-coding chr1-15206 chr1 110229405 110229615 + 5.66 0.000 intron (NM_001039574, intron 3 of 3) intron (NM_001039574, intron 3 of 3) 19196 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr5-3713 chr5 15352661 15352871 + 5.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -86206 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr12-6060 chr12 113502680 113502890 + 5.66 0.000 Intergenic L1ME5|LINE|L1 30782 NR_126425 104355219 Hs.641707 NR_126425 LHX5-AS1 locus 4010|locus4010 LHX5 antisense RNA 1 ncRNA chr15-2700 chr15 86048154 86048364 + 5.66 0.000 Intergenic L1M2|LINE|L1 -31361 NM_152336 123624 Hs.31795 NM_152336 ENSG00000273540 AGBL1 CCP4|FECD8 ATP/GTP binding protein like 1 protein-coding chr11-5820 chr11 7490116 7490326 + 5.66 0.000 intron (NM_198474, intron 2 of 2) intron (NM_198474, intron 2 of 2) 4455 NM_001370501 283298 Hs.503500 NM_198474 ENSG00000183801 OLFML1 MVAL564|UNQ564 olfactomedin like 1 protein-coding chr6-3850 chr6 42828401 42828611 + 5.66 0.000 exon (NM_015349, exon 5 of 12) exon (NM_015349, exon 5 of 12) 7450 NM_015349 23506 Hs.658033 NM_015349 ENSG00000112624 BICRAL GLTSCR1L|KIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding chr4-7101 chr4 33605665 33605875 + 5.66 0.000 Intergenic MSTA|LTR|ERVL-MaLR 434123 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr20-2722 chr20 49052540 49052750 + 5.66 0.000 intron (NM_001362762, intron 1 of 24) AluJo|SINE|Alu 6333 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr20-4117 chr20 41737867 41738077 + 5.66 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -119595 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr18-1518 chr18 7585122 7585332 + 5.66 0.000 intron (NM_002845, intron 1 of 30) intron (NM_002845, intron 1 of 30) 17911 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr1-14963 chr1 88709867 88710077 + 5.66 0.000 intron (NM_001320708, intron 1 of 20) L2a|LINE|L2 -24768 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chrX-2704 chrX 120264729 120264939 + 5.66 0.000 intron (NM_001104544, intron 8 of 8) intron (NM_001104544, intron 8 of 8) 14022 NM_006777 10009 Hs.143604 NM_006777 ENSG00000177485 ZBTB33 ZNF-kaiso|ZNF348 zinc finger and BTB domain containing 33 protein-coding chr14-4453 chr14 33737450 33737660 + 5.66 0.000 intron (NM_001165893, intron 6 of 10) intron (NM_001165893, intron 6 of 10) 28618 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr4-7572 chr4 79052353 79052563 + 5.66 0.000 intron (NR_038342, intron 2 of 5) intron (NR_038342, intron 2 of 5) 80710 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA chr2-9487 chr2 236156637 236156847 + 5.66 0.000 Intergenic Intergenic 11644 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr11-9228 chr11 41156743 41156953 + 5.66 0.000 intron (NM_001258419, intron 1 of 6) MLT1A1|LTR|ERVL-MaLR 302788 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr3-8589 chr3 159150224 159150434 + 5.66 0.000 intron (NM_001197113, intron 1 of 10) LTR16C|LTR|ERVL 81010 NM_001042706 654502 Hs.570685 NM_001042705 ENSG00000214216 IQCJ - IQ motif containing J protein-coding chr11-8982 chr11 22111371 22111581 + 5.66 0.000 Intergenic ERVL-B4-int|LTR|ERVL -81609 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr19-2988 chr19 36190501 36190711 + 5.66 0.000 intron (NM_001366188, intron 4 of 4) MLT1D|LTR|ERVL-MaLR 22973 NM_001366189 147929 Hs.596338 NM_152477 ENSG00000196357 ZNF565 - zinc finger protein 565 protein-coding chr10-6066 chr10 129540960 129541170 + 5.66 0.000 intron (NM_002412, intron 2 of 4) intron (NM_002412, intron 2 of 4) 73824 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr11-5117 chr11 125513238 125513448 + 5.66 0.000 Intergenic LTR48|LTR|ERV1 -17033 NM_022549 9638 Hs.224008 NM_005103 ENSG00000149557 FEZ1 UNC-76 fasciculation and elongation protein zeta 1 protein-coding chr4-5980 chr4 181292933 181293143 + 5.66 0.000 Intergenic UCON132b|DNA|hAT-Tip100 -28009 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr4-5779 chr4 77488978 77489188 + 5.66 0.000 Intergenic Intergenic -22670 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr13-3837 chr13 48682403 48682613 + 5.66 0.000 intron (NM_001308471, intron 1 of 1) intron (NM_001308471, intron 1 of 1) 28579 NM_001308471 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chrX-3077 chrX 123186173 123186383 + 5.66 0.000 intron (NM_007325, intron 2 of 15) intron (NM_007325, intron 2 of 15) 2000 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr22-3197 chr22 36728231 36728441 + 5.66 0.000 intron (NR_134623, intron 2 of 3) (TGTGCA)n|Simple_repeat|Simple_repeat 24460 NR_134623 105373021 Hs.401697 NR_134623 LOC105373021 - uncharacterized LOC105373021 ncRNA chr13-1993 chr13 29462343 29462553 + 5.66 0.000 intron (NM_015233, intron 2 of 8) L2a|LINE|L2 25302 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr2-14134 chr2 202670131 202670341 + 5.66 0.000 intron (NM_173511, intron 1 of 7) intron (NM_173511, intron 1 of 7) 35267 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr13-1884 chr13 35678204 35678414 + 5.66 0.000 Intergenic Intergenic -19215 NR_132116 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr1-9399 chr1 31538317 31538527 + 5.66 0.000 Intergenic Intergenic 19987 NR_027085 284551 Hs.658659 NR_027085 LINC01226 - long intergenic non-protein coding RNA 1226 ncRNA chr1-15323 chr1 119452917 119453127 + 5.66 0.000 Intergenic Intergenic 37872 NM_000198 3284 Hs.654399 NM_000198 ENSG00000203859 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding chr16-2314 chr16 23795067 23795277 + 5.66 0.000 Intergenic AluSz6|SINE|Alu 40146 NM_022097 63928 Hs.178589 NM_022097 ENSG00000166869 CHP2 - calcineurin like EF-hand protein 2 protein-coding chr1-14091 chr1 30513306 30513516 + 5.66 0.000 Intergenic MIR3|SINE|MIR -205361 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr8-5512 chr8 61181539 61181749 + 5.66 0.000 Intergenic L1PA8|LINE|L1 -106326 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr7-9584 chr7 147473757 147473967 + 5.66 0.000 intron (NM_014141, intron 9 of 22) AluSp|SINE|Alu -95741 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr11-6795 chr11 89623458 89623668 + 5.66 0.000 Intergenic Intergenic -34006 NM_001143837 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr9-3071 chr9 825351 825561 + 5.66 0.000 Intergenic AluJb|SINE|Alu -16241 NM_021951 1761 Hs.98586 NM_021951 ENSG00000137090 DMRT1 CT154|DMT1 doublesex and mab-3 related transcription factor 1 protein-coding chr15-4799 chr15 72297405 72297615 + 5.66 0.000 intron (NM_052840, intron 3 of 12) L1MB2|LINE|L1 8805 NM_001172685 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr1-11764 chr1 21472942 21473152 + 5.66 0.000 intron (NM_001256416, intron 6 of 14) intron (NM_001256416, intron 6 of 14) 32910 NM_001256416 84224 Hs.325422 NM_032264 ENSG00000142794 NBPF3 AE2 NBPF member 3 protein-coding chr2-11438 chr2 224424084 224424294 + 5.66 0.000 Intergenic L1MA5|LINE|L1 -22082 NM_001122779 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr2-14520 chr2 228800816 228801026 + 5.66 0.000 Intergenic Intergenic -189526 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr17-7597 chr17 21483090 21483300 + 5.66 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 68483 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr11-7842 chr11 114555056 114555266 + 5.66 0.000 intron (NM_152315, intron 1 of 5) intron (NM_152315, intron 1 of 5) 4720 NM_001367953 120400 Hs.550126 NM_152315 ENSG00000095110 NXPE1 FAM55A neurexophilin and PC-esterase domain family member 1 protein-coding chr7-7369 chr7 57788415 57788625 + 5.66 0.000 Intergenic Intergenic 338343 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr12-6716 chr12 5249951 5250161 + 5.66 0.000 Intergenic L2b|LINE|L2 -6905 NR_120477 101929584 Hs.436529 NR_120476 ENSG00000256115 LINC02443 - long intergenic non-protein coding RNA 2443 ncRNA chrX-4580 chrX 71503452 71503662 + 5.66 0.000 intron (NR_104396, intron 1 of 2) intron (NR_104396, intron 1 of 2) 11107 NR_104396 6872 Hs.158560 NM_004606 ENSG00000147133 TAF1 BA2R|CCG1|CCGS|DYT3|DYT3/TAF1|KAT4|MRXS33|N-TAF1|NSCL2|OF|P250|TAF(II)250|TAF2A|TAFII-250|TAFII250|XDP TATA-box binding protein associated factor 1 protein-coding chr5-7737 chr5 59562940 59563150 + 5.66 0.000 intron (NM_001349242, intron 1 of 16) intron (NM_001349242, intron 1 of 16) 23453 NM_001349242 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-15545 chr1 157834770 157834980 + 5.66 0.000 intron (NM_001347698, intron 3 of 5) intron (NM_001347698, intron 3 of 5) 6933 NM_005894 922 Hs.134035 NM_005894 ENSG00000073754 CD5L AIM|API6|CT-2|PRO229|SP-ALPHA|Spalpha|hAIM CD5 molecule like protein-coding chr15-3654 chr15 90693778 90693988 + 5.66 0.000 intron (NR_120372, intron 2 of 3) intron (NR_120372, intron 2 of 3) 23257 NR_120372 101926895 Hs.564760 NR_120372 ENSG00000259736 CRTC3-AS1 - CRTC3 antisense RNA 1 ncRNA chr10-8684 chr10 101242281 101242491 + 5.66 0.000 Intergenic Intergenic 12792 NR_029380 399806 Hs.386143 NR_029380 LBX1-AS1 MUSE LBX1 antisense RNA 1 ncRNA chr8-6473 chr8 62216600 62216810 + 5.66 0.000 Intergenic Intergenic -32149 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chrX-4091 chrX 23509596 23509806 + 5.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -157792 NM_006406 10549 Hs.83383 NM_006406 ENSG00000123131 PRDX4 AOE37-2|AOE372|HEL-S-97n|PRX-4 peroxiredoxin 4 protein-coding chr5-3822 chr5 99208968 99209178 + 5.66 0.000 Intergenic SATR1|Satellite|Satellite -279359 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr7-8671 chr7 72303709 72303919 + 5.66 0.000 intron (NM_001363460, intron 1 of 5) AluJo|SINE|Alu 33577 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr4-8677 chr4 179935223 179935433 + 5.66 0.000 Intergenic Intergenic 1223821 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr11-8114 chr11 45256128 45256338 + 5.66 0.000 intron (NM_020826, intron 1 of 5) (CTTCCTT)n|Simple_repeat|Simple_repeat 30108 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr3-10088 chr3 109675855 109676065 + 5.66 0.000 Intergenic MamGypLTR1c|LTR|Gypsy 73132 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr7-9722 chr7 156897577 156897787 + 5.66 0.000 Intergenic AluSc|SINE|Alu -4474 NR_146959 64327 Hs.209989 NM_022458 ENSG00000105983 LMBR1 ACHP|C7orf2|DIF14|LSS|PPD2|THYP|TPT|ZRS limb development membrane protein 1 protein-coding chr3-6130 chr3 54928723 54928933 + 5.66 0.000 promoter-TSS (NM_020678) promoter-TSS (NM_020678) -769 NM_020678 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr3-6886 chr3 154445590 154445800 + 5.66 0.000 Intergenic L1ME3|LINE|L1 -15505 NM_001038705 344758 Hs.376338 NM_001038705 ENSG00000174948 GPR149 IEDA|PGR10|R35 G protein-coupled receptor 149 protein-coding chr11-8660 chr11 3489284 3489494 + 5.66 0.000 Intergenic Intergenic 82598 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA chr1-15669 chr1 166089270 166089480 + 5.66 0.000 intron (NR_163271, intron 1 of 2) intron (NR_163271, intron 1 of 2) 65423 NR_030626 100126349 NR_030626 ENSG00000215952 MIR921 MIRN921|hsa-mir-921 microRNA 921 ncRNA chr16-5492 chr16 8894157 8894367 + 5.66 0.000 intron (NM_001286458, intron 31 of 31) intron (NM_001286458, intron 31 of 31) -25250 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr17-4792 chr17 48156574 48156784 + 5.66 0.000 promoter-TSS (NR_031607) promoter-TSS (NR_031607) -168 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr11-7817 chr11 107221343 107221553 + 5.66 0.000 Intergenic AluSx1|SINE|Alu -202972 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr2-11000 chr2 101279450 101279660 + 5.66 0.000 intron (NM_173647, intron 6 of 6) L3|LINE|CR1 -6506 NR_003070 692205 Hs.656503 NR_003070 ENSG00000212283 SNORD89 HBII-289 small nucleolar RNA, C/D box 89 snoRNA chr7-3794 chr7 91081784 91081994 + 5.66 0.000 intron (NM_012395, intron 11 of 13) intron (NM_012395, intron 11 of 13) -182544 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr17-6226 chr17 17074284 17074494 + 5.66 0.000 intron (NM_201274, intron 1 of 23) intron (NM_201274, intron 1 of 23) 31629 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr4-7120 chr4 35969833 35970043 + 5.66 0.000 Intergenic AluSx|SINE|Alu 274001 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr1-10448 chr1 160168795 160169005 + 5.66 0.000 intron (NM_144699, intron 10 of 21) intron (NM_144699, intron 10 of 21) -8511 NM_001001734 480 Hs.662219 NM_144699 ENSG00000132681 ATP1A4 ATP1A1|ATP1AL2 ATPase Na+/K+ transporting subunit alpha 4 protein-coding chr19-6776 chr19 40784806 40785016 + 5.66 0.000 intron (NM_016154, intron 5 of 7) AluSx4|SINE|Alu 6664 NM_016154 53916 Hs.631539 NM_016154 ENSG00000167578 RAB4B - RAB4B, member RAS oncogene family protein-coding chrX-3949 chrX 11052546 11052756 + 5.66 0.000 Intergenic Intergenic -58681 NM_001122608 3052 Hs.211571 NM_005333 ENSG00000004961 HCCS CCHL|LSDMCA1|MCOPS7|MLS holocytochrome c synthase protein-coding chr1-15425 chr1 152717134 152717344 + 5.66 0.000 Intergenic MIR|SINE|MIR -2283 NM_001024679 100129271 Hs.601077 NM_001024679 ENSG00000198854 C1orf68 LEP7|XP32 chromosome 1 open reading frame 68 protein-coding chr11-10270 chr11 102920162 102920372 + 5.66 0.000 Intergenic Intergenic 35465 NM_002427 4322 Hs.2936 NM_002427 ENSG00000137745 MMP13 CLG3|MANDP1|MDST|MMP-13 matrix metallopeptidase 13 protein-coding chr9-6219 chr9 111491287 111491497 + 5.66 0.000 Intergenic MER21A|LTR|ERVL -7009 NM_001363756 23392 Hs.368255 NM_001080398 ENSG00000136813 ECPAS ECM29|KIAA0368 Ecm29 proteasome adaptor and scaffold protein-coding chr20-3107 chr20 31503272 31503482 + 5.66 0.000 Intergenic AluSx|SINE|Alu -11033 NM_178580 81502 Hs.373741 NM_030789 ENSG00000101294 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 histocompatibility minor 13 protein-coding chrX-892 chrX 46758881 46759091 + 5.66 0.000 exon (NM_032591, exon 1 of 17) exon (NM_032591, exon 1 of 17) 132 NM_001257291 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr17-8109 chr17 57193810 57194020 + 5.66 0.000 Intergenic Intergenic -61936 NM_001322250 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr11-8900 chr11 15909820 15910030 + 5.66 0.000 Intergenic Intergenic 59696 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr7-7824 chr7 3381356 3381566 + 5.66 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 80209 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr21-1497 chr21 41835655 41835865 + 5.66 0.000 intron (NM_001040424, intron 10 of 23) intron (NM_001040424, intron 10 of 23) 27542 NR_104260 63977 Hs.473893 NM_022115 ENSG00000141956 PRDM15 C21orf83|PFM15|ZNF298 PR/SET domain 15 protein-coding chr3-10253 chr3 123492371 123492581 + 5.66 0.000 3' UTR (NM_198402, exon 7 of 7) 3' UTR (NM_198402, exon 7 of 7) -43931 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr2-11016 chr2 105630342 105630552 + 5.66 0.000 Intergenic Intergenic -19888 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chr3-10782 chr3 158841016 158841226 + 5.66 0.000 Intergenic Intergenic 39067 NR_110328 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr7-9485 chr7 136115330 136115540 + 5.66 0.000 Intergenic L1PA15-16|LINE|L1 -138076 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr6-6955 chr6 17323578 17323788 + 5.66 0.000 Intergenic HERVFH21-int|LTR|ERV1 40982 NM_153020 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr19-5864 chr19 45231459 45231669 + 5.66 0.000 intron (NM_138568, intron 2 of 9) intron (NM_138568, intron 2 of 9) 2647 NM_138568 90332 Hs.337557 NM_138568 ENSG00000283632 EXOC3L2 XTP7 exocyst complex component 3 like 2 protein-coding chrX-4553 chrX 69186501 69186711 + 5.66 0.000 intron (NR_103715, intron 1 of 4) L2a|LINE|L2 7049 NR_103715 100996279 NR_103715 ENSG00000215162 LINC00269 CXorf62|NCRNA00269 long intergenic non-protein coding RNA 269 ncRNA chr2-12305 chr2 47007848 47008058 + 5.66 0.000 intron (NM_001288951, intron 10 of 20) intron (NM_001288951, intron 10 of 20) -66098 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr3-11107 chr3 186025308 186025518 + 5.66 0.000 Intergenic Intergenic 65470 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr16-6171 chr16 24737984 24738194 + 5.66 0.000 intron (NM_014494, intron 2 of 24) intron (NM_014494, intron 2 of 24) 8438 NM_001330520 27327 Hs.655057 NM_014494 ENSG00000090905 TNRC6A CAGH26|FAME6|GW1|GW182|TNRC6 trinucleotide repeat containing adaptor 6A protein-coding chr3-8019 chr3 190659074 190659284 + 5.66 0.000 3' UTR (NM_001167931, exon 12 of 12) 3' UTR (NM_001167931, exon 12 of 12) 145094 NM_001167928 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr20-4199 chr20 46250981 46251191 + 5.66 0.000 exon (NM_021248, exon 2 of 12) exon (NM_021248, exon 2 of 12) 57412 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr13-3499 chr13 20463216 20463426 + 5.66 0.000 intron (NM_015974, intron 3 of 7) intron (NM_015974, intron 3 of 7) -29475 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr5-7048 chr5 168927758 168927968 + 5.66 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) -85364 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr6-4240 chr6 6306555 6306765 + 5.66 0.000 intron (NM_000129, intron 2 of 14) intron (NM_000129, intron 2 of 14) 14031 NM_000129 2162 Hs.335513 NM_000129 ENSG00000124491 F13A1 F13A coagulation factor XIII A chain protein-coding chr1-14393 chr1 44049628 44049838 + 5.66 0.000 Intergenic AluJb|SINE|Alu -18271 NM_001024845 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr1-8937 chr1 7922295 7922505 + 5.66 0.000 intron (NM_001561, intron 8 of 8) L1MD2|LINE|L1 20765 NM_001561 3604 Hs.86447 NM_001561 ENSG00000049249 TNFRSF9 4-1BB|CD137|CDw137|ILA TNF receptor superfamily member 9 protein-coding chrX-5093 chrX 127100350 127100560 + 5.66 0.000 Intergenic L1PA10|LINE|L1 280726 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr1-12026 chr1 107842088 107842298 + 5.66 0.000 intron (NM_006113, intron 2 of 26) intron (NM_006113, intron 2 of 26) -55030 NR_107006 102465839 NR_107006 ENSG00000275455 MIR7852 hsa-mir-7852 microRNA 7852 ncRNA chr6-8624 chr6 170063715 170063925 + 5.66 0.000 Intergenic Intergenic -96822 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr18-3294 chr18 53875236 53875446 + 5.66 0.000 Intergenic Intergenic -294282 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr1-9478 chr1 36341998 36342208 + 5.66 0.000 intron (NM_001282546, intron 10 of 10) intron (NM_001282546, intron 10 of 10) -17949 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr17-5291 chr17 21480676 21480886 + 5.66 0.000 Intergenic MER34-int|LTR|ERV1 70897 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr16-6560 chr16 65418692 65418902 + 5.66 0.000 intron (NR_027755, intron 2 of 8) MLT1A0|LTR|ERVL-MaLR 157503 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr13-2822 chr13 104212645 104212855 + 5.66 0.000 Intergenic HERVH-int|LTR|ERV1 787550 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr18-3559 chr18 77331135 77331345 + 5.66 0.000 Intergenic Intergenic 81392 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr6-6617 chr6 149900724 149900934 + 5.66 0.000 intron (NR_045127, intron 2 of 2) intron (NR_045127, intron 2 of 2) -4770 NM_001243328 135250 Hs.511818 NM_139165 ENSG00000164520 RAET1E LETAL|N2DL-4|NKG2DL4|RAET1E2|RL-4|ULBP4|bA350J20.7 retinoic acid early transcript 1E protein-coding chr19-5678 chr19 10149773 10149983 + 5.66 0.000 exon (NM_001130823, exon 25 of 41) exon (NM_001130823, exon 25 of 41) -29979 NM_003755 8666 Hs.529059 NM_003755 ENSG00000130811 EIF3G EIF3-P42|EIF3S4|eIF3-delta|eIF3-p44 eukaryotic translation initiation factor 3 subunit G protein-coding chr14-3529 chr14 103973873 103974083 + 5.66 0.000 intron (NM_153046, intron 6 of 35) AluJb|SINE|Alu -31449 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr20-4099 chr20 40786699 40786909 + 5.66 0.000 Intergenic L2b|LINE|L2 -72181 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr19-3372 chr19 12289424 12289634 + 5.66 0.000 intron (NM_001353552, intron 1 of 3) MER92B|LTR|ERV1 5083 NM_001353551 51710 Hs.296731 NM_016264 ENSG00000197857 ZNF44 GIOT-2|KOX7|ZNF|ZNF504|ZNF55|ZNF58 zinc finger protein 44 protein-coding chr6-8278 chr6 141744194 141744404 + 5.66 0.000 Intergenic MLT1G3-int|LTR|ERVL-MaLR 344500 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr10-7666 chr10 27628672 27628882 + 5.66 0.000 Intergenic Intergenic -115838 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr9-5105 chr9 35562712 35562922 + 5.66 0.000 TTS (NM_001135999) TTS (NM_001135999) 1061 NM_001287239 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr7-9632 chr7 150934368 150934578 + 5.66 0.000 Intergenic MER20|DNA|hAT-Charlie 21331 NM_001204798 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chr9-4016 chr9 38009229 38009439 + 5.66 0.000 intron (NM_003028, intron 2 of 5) intron (NM_003028, intron 2 of 5) 59893 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr12-4239 chr12 111397131 111397341 + 5.66 0.000 Intergenic CpG -8712 NM_005475 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr16-6403 chr16 54577730 54577940 + 5.66 0.000 Intergenic Intergenic -207136 NR_134923 100996345 Hs.112680 NR_134922 ENSG00000261803 LINC02140 - long intergenic non-protein coding RNA 2140 ncRNA chrX-3099 chrX 140303044 140303254 + 5.66 0.000 Intergenic AluYm1|SINE|Alu 201911 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr5-4383 chr5 176395499 176395709 + 5.66 0.000 intron (NR_045724, intron 5 of 5) intron (NR_045724, intron 5 of 5) -6677 NM_001256539 51491 Hs.696283 NM_016391 ENSG00000048162 NOP16 HSPC111|HSPC185 NOP16 nucleolar protein protein-coding chr3-9146 chr3 32313460 32313670 + 5.66 0.000 intron (NM_001320308, intron 1 of 2) AluJo|SINE|Alu 74885 NM_178868 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr21-1587 chr21 15729763 15729973 + 5.66 0.000 promoter-TSS (NM_001352561) promoter-TSS (NM_001352561) -66 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr8-4440 chr8 111790680 111790890 + 5.66 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 414146 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr2-9888 chr2 217803703 217803913 + 5.66 0.000 3' UTR (NM_022648, exon 33 of 33) 3' UTR (NM_022648, exon 33 of 33) 29925 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr11-9791 chr11 69946601 69946811 + 5.66 0.000 Intergenic THE1C|LTR|ERVL-MaLR 117218 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr5-6194 chr5 62134940 62135150 + 5.66 0.000 Intergenic Intergenic -171117 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr19-6432 chr19 15527294 15527504 + 5.66 0.000 intron (NM_173483, intron 3 of 13) L2b|LINE|L2 18874 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr12-4420 chr12 8098347 8098557 + 5.66 0.000 TTS (NR_024260) TTS (NR_024260) 16178 NM_015509 25977 Hs.555927 NM_015509 ENSG00000089818 NECAP1 EIEE21 NECAP endocytosis associated 1 protein-coding chr16-3564 chr16 59494048 59494258 + 5.66 0.000 Intergenic Intergenic 261038 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr2-9017 chr2 196718489 196718699 + 5.66 0.000 exon (NM_001353340, exon 2 of 11) exon (NM_001353340, exon 2 of 11) 5056 NM_001353340 284992 Hs.132519 NM_173466 ENSG00000144395 CCDC150 - coiled-coil domain containing 150 protein-coding chr4-3703 chr4 58143289 58143499 + 5.66 0.000 Intergenic L2a|LINE|L2 392934 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr4-8009 chr4 116809764 116809974 + 5.66 0.000 Intergenic L1PA4|LINE|L1 275707 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr9-6965 chr9 105716430 105716640 + 5.66 0.000 intron (NM_018112, intron 2 of 5) L1MC5|LINE|L1 21994 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr7-9423 chr7 133121447 133121657 + 5.66 0.000 Intergenic Intergenic -13041 NR_133931 105375512 Hs.521205 NR_133931 LOC105375512 - uncharacterized LOC105375512 ncRNA chr4-4809 chr4 106993929 106994139 + 5.66 0.000 intron (NM_014421, intron 1 of 3) intron (NM_014421, intron 1 of 3) 42279 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr21-1144 chr21 39566387 39566597 + 5.66 0.000 Intergenic L2a|LINE|L2 46330 NR_026543 114041 Hs.375120 NM_153754 ENSG00000184809 B3GALT5-AS1 C21orf88 B3GALT5 antisense RNA 1 ncRNA chr21-1201 chr21 44258464 44258674 + 5.66 0.000 exon (NM_013369, exon 6 of 12) exon (NM_013369, exon 6 of 12) 3328 NM_013369 29947 Hs.592165 NM_013369 ENSG00000142182 DNMT3L - DNA methyltransferase 3 like protein-coding chr9-6160 chr9 73050243 73050453 + 5.66 0.000 Intergenic Intergenic -97295 NM_000689 216 Hs.76392 NM_000689 ENSG00000165092 ALDH1A1 ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 aldehyde dehydrogenase 1 family member A1 protein-coding chr8-2416 chr8 92071493 92071703 + 5.66 0.000 intron (NM_001198632, intron 1 of 11) intron (NM_001198632, intron 1 of 11) -8964 NM_004349 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr11-7793 chr11 96806223 96806433 + 5.66 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 297903 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chrX-5212 chrX 135060470 135060680 + 5.66 0.000 Intergenic MER66-int|LTR|ERV1 -8384 NM_001078172 26071 Hs.460924 NM_015582 ENSG00000203950 RTL8A CXX1b|FAM127B|MAR8A|SIRH6 retrotransposon Gag like 8A protein-coding chr4-5187 chr4 158970922 158971132 + 5.66 0.000 intron (NM_152543, intron 2 of 4) intron (NM_152543, intron 2 of 4) 64202 NM_152543 152940 Hs.415576 NM_152543 ENSG00000164123 C4orf45 - chromosome 4 open reading frame 45 protein-coding chr7-9162 chr7 113092225 113092435 + 5.66 0.000 Intergenic L2|LINE|L2 -4552 NM_018970 54329 Hs.152009 NM_018970 ENSG00000164604 GPR85 SREB|SREB2 G protein-coupled receptor 85 protein-coding chr6-7322 chr6 45584351 45584561 + 5.66 0.000 Intergenic Intergenic 162181 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr2-13678 chr2 163787757 163787967 + 5.66 0.000 Intergenic MER21B|LTR|ERVL -51854 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr1-16214 chr1 208685958 208686168 + 5.66 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -42625 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr21-1805 chr21 39088760 39088970 + 5.66 0.000 Intergenic MER75|DNA|PiggyBac 94586 NM_003720 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chr2-11871 chr2 22904423 22904633 + 5.66 0.000 Intergenic Intergenic 368049 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr1-4474 chr1 11852708 11852918 + 5.66 0.000 Intergenic AluJr|SINE|Alu -5030 NM_006172 4878 Hs.75640 NM_006172 ENSG00000175206 NPPA ANF|ANP|ATFB6|ATRST2|CDD|CDD-ANF|CDP|PND natriuretic peptide A protein-coding chr2-13705 chr2 166160959 166161169 + 5.66 0.000 intron (NR_110260, intron 2 of 11) intron (NR_110260, intron 2 of 11) -11903 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr9-5614 chr9 117190087 117190297 + 5.66 0.000 intron (NM_001365068, intron 3 of 22) MER102b|DNA|hAT-Charlie -8991 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr9-7223 chr9 1010796 1011006 + 5.66 0.000 Intergenic AluJr|SINE|Alu 34246 NM_021240 58524 Hs.189174 NM_021240 ENSG00000064218 DMRT3 DMRTA3 doublesex and mab-3 related transcription factor 3 protein-coding chr3-9953 chr3 94456547 94456757 + 5.66 0.000 Intergenic Intergenic 393591 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chrX-5241 chrX 137034876 137035086 + 5.66 0.000 Intergenic Intergenic -3307 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr12-7417 chr12 58387289 58387499 + 5.66 0.000 Intergenic Intergenic -204308 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr5-2112 chr5 63126045 63126255 + 5.66 0.000 Intergenic Intergenic 547331 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr5-2865 chr5 79835712 79835922 + 5.66 0.000 Intergenic AluYm1|SINE|Alu -100762 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr17-8153 chr17 59876107 59876317 + 5.66 0.000 intron (NM_016261, intron 5 of 8) AluJr|SINE|Alu 16731 NM_016261 51174 Hs.463638 NM_016261 ENSG00000108423 TUBD1 TUBD tubulin delta 1 protein-coding chr9-8712 chr9 131584323 131584533 + 5.66 0.000 intron (NM_198679, intron 20 of 23) intron (NM_198679, intron 20 of 23) 38905 NM_001365666 642515 NM_001365666 ENSG00000283526 PRRT1B DSPD2|IFITMD8 proline rich transmembrane protein 1B protein-coding chr1-12258 chr1 223506078 223506288 + 5.66 0.000 Intergenic AluSc5|SINE|Alu 112768 NM_152610 164127 Hs.192090 NM_152610 ENSG00000178395 CCDC185 C1orf65 coiled-coil domain containing 185 protein-coding chr4-6131 chr4 25970346 25970556 + 5.66 0.000 Intergenic Intergenic 56259 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr14-4294 chr14 20813640 20813850 + 5.66 0.000 Intergenic Intergenic -10901 NM_002933 6035 Hs.78224 NM_002933 ENSG00000129538 RNASE1 RAC1|RIB1|RNS1 ribonuclease A family member 1, pancreatic protein-coding chr15-4584 chr15 59512724 59512934 + 5.66 0.000 intron (NM_152450, intron 6 of 8) intron (NM_152450, intron 6 of 8) 74643 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding chr7-7045 chr7 139702468 139702678 + 5.66 0.000 intron (NM_001113239, intron 2 of 14) intron (NM_001113239, intron 2 of 14) 75425 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr11-7975 chr11 9533826 9534036 + 5.66 0.000 Intergenic MER4CL34|LTR|ERV1 -39739 NM_003390 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr21-1430 chr21 21725613 21725823 + 5.66 0.000 intron (NR_038872, intron 2 of 2) intron (NR_038872, intron 2 of 2) 11601 NR_038872 378828 Hs.551009 NR_038872 ENSG00000238265 LINC00317 C21orf117|NCRNA00317|PRED89 long intergenic non-protein coding RNA 317 ncRNA chrX-3232 chrX 65765067 65765277 + 5.66 0.000 Intergenic L1PA7|LINE|L1 97518 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr4-4903 chr4 122030067 122030277 + 5.66 0.000 Intergenic L1PA7|LINE|L1 -78112 NM_001130698 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr10-9244 chr10 133294534 133294744 + 5.66 0.000 intron (NM_006659, intron 5 of 17) AluJr|SINE|Alu -14275 NM_145806 118472 Hs.422113 NM_145806 ENSG00000198546 ZNF511 - zinc finger protein 511 protein-coding chr5-7724 chr5 58862362 58862572 + 5.66 0.000 Intergenic L1PA15|LINE|L1 137431 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr20-2561 chr20 36591018 36591228 + 5.66 0.000 exon (NM_001199515, exon 3 of 3) exon (NM_001199515, exon 3 of 3) -14656 NR_026562 55969 Hs.584985 NM_018840 ENSG00000101084 RAB5IF C20orf24|PNAS-11|RIP5 RAB5 interacting factor protein-coding chr14-4102 chr14 68199473 68199683 + 5.66 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 375986 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr9-5395 chr9 93111598 93111808 + 5.66 0.000 non-coding (NR_134464, exon 3 of 4) non-coding (NR_134464, exon 3 of 4) 15486 NR_134467 84270 Hs.434213 NM_032310 ENSG00000165233 CARD19 BinCARD|C9orf89 caspase recruitment domain family member 19 protein-coding chr3-9773 chr3 70566015 70566225 + 5.66 0.000 Intergenic Intergenic -253482 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr5-3121 chr5 54837252 54837462 + 5.66 0.000 Intergenic Intergenic -93099 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr20-3890 chr20 31489739 31489949 + 5.66 0.000 Intergenic L1ME3C|LINE|L1 4066 NR_024358 140875 Hs.283478 NR_024358 ENSG00000233354 LINC00028 C20orf93|NCRNA00028|dJ1093G12.6 long intergenic non-protein coding RNA 28 ncRNA chr17-6650 chr17 68469916 68470126 + 5.66 0.000 intron (NM_001278433, intron 1 of 10) Charlie1b|DNA|hAT-Charlie -12497 NM_001320772 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding chr1-16001 chr1 197575728 197575938 + 5.66 0.000 intron (NM_144977, intron 15 of 15) L1PA6|LINE|L1 199647 NM_001300858 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr2-13287 chr2 128941552 128941762 + 5.66 0.000 Intergenic Intergenic 77057 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr2-8124 chr2 80050316 80050526 + 5.66 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -183838 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr1-14197 chr1 34408139 34408349 + 5.66 0.000 Intergenic Intergenic 231337 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr2-5649 chr2 195632145 195632355 + 5.66 0.000 Intergenic Intergenic -24708 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr1-5838 chr1 231039837 231040047 + 5.66 0.000 exon (NM_198552, exon 1 of 2) exon (NM_198552, exon 1 of 2) 312 NM_198552 375061 Hs.38516 NM_198552 ENSG00000182118 FAM89A C1orf153 family with sequence similarity 89 member A protein-coding chr2-11370 chr2 209660870 209661080 + 5.66 0.000 intron (NM_001039538, intron 5 of 14) AluY|SINE|Alu 81296 NM_001363911 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr12-6647 chr12 623832 624042 + 5.66 0.000 intron (NM_016533, intron 1 of 3) AluJo|SINE|Alu -6954 NR_122124 100049716 Hs.655804 NR_122124 ENSG00000177406 LOC100049716 - uncharacterized LOC100049716 ncRNA chr12-7572 chr12 75589930 75590140 + 5.66 0.000 Intergenic Intergenic -78426 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr10-7795 chr10 36759331 36759541 + 5.66 0.000 Intergenic Intergenic -366421 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr2-12886 chr2 98511221 98511431 + 5.66 0.000 intron (NM_001351428, intron 1 of 24) AluSc8|SINE|Alu 65316 NM_001351428 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr8-7325 chr8 133655125 133655335 + 5.66 0.000 Intergenic Intergenic 28836 NR_134462 105375773 Hs.445172 NR_134462 LOC105375773 - uncharacterized LOC105375773 ncRNA chr10-5279 chr10 68774471 68774681 + 5.66 0.000 intron (NR_104262, intron 18 of 23) AluSx|SINE|Alu 19404 NR_003076 692211 NR_003076 ENSG00000283551 SNORD98 HBII-419 small nucleolar RNA, C/D box 98 snoRNA chr12-2204 chr12 32060549 32060759 + 5.66 0.000 Intergenic MER20B|DNA|hAT-Charlie -46153 NM_001363603 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr2-12271 chr2 45823802 45824012 + 5.66 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 172232 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr10-6178 chr10 14847084 14847294 + 5.66 0.000 TTS (NM_001278205) TTS (NM_001278205) 8883 NM_016299 51182 Hs.534169 NM_016299 ENSG00000187522 HSPA14 HSP70-4|HSP70L1 heat shock protein family A (Hsp70) member 14 protein-coding chr14-2643 chr14 68168761 68168971 + 5.66 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 345274 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chrX-1337 chrX 134570234 134570444 + 5.66 0.000 intron (NM_001316889, intron 1 of 1) intron (NM_001316889, intron 1 of 1) 20315 NR_038998 100506757 Hs.130961 NR_038998 LINC00629 LINC00629A|LINC00629B|LINC00629C|LINC00629D long intergenic non-protein coding RNA 629 ncRNA chr17-3802 chr17 40304532 40304742 + 5.66 0.000 TTS (NM_001254) TTS (NM_001254) -4543 NM_000964 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding chr13-3949 chr13 61038111 61038321 + 5.66 0.000 Intergenic Intergenic 161664 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr3-8877 chr3 10620543 10620753 + 5.66 0.000 promoter-TSS (NM_001353564) promoter-TSS (NM_001353564) -687 NM_001353564 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr6-5667 chr6 99902776 99902986 + 5.66 0.000 Intergenic Intergenic -91157 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr8-6407 chr8 56522194 56522404 + 5.66 0.000 intron (NR_038236, intron 1 of 2) intron (NR_038236, intron 1 of 2) 37524 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr11-8262 chr11 67766328 67766538 + 5.66 0.000 Intergenic Intergenic 38903 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr2-8174 chr2 86264302 86264512 + 5.66 0.000 intron (NM_001164731, intron 1 of 5) intron (NM_001164731, intron 1 of 5) 64950 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr20-2797 chr20 56456029 56456239 + 5.66 0.000 intron (NM_001164116, intron 6 of 6) intron (NM_001164116, intron 6 of 6) -12451 NM_001283036 51507 Hs.517134 NM_016407 ENSG00000022277 RTF2 C20orf43|CDAO5|HSPC164|RTFDC1|SHUJUN-3 replication termination factor 2 protein-coding chr11-9005 chr11 24339411 24339621 + 5.66 0.000 Intergenic L1MA5|LINE|L1 -157537 NM_001252010 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr1-13664 chr1 11414094 11414304 + 5.66 0.000 Intergenic Intergenic -64956 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr11-5076 chr11 113439753 113439963 + 5.66 0.000 intron (NM_016574, intron 1 of 6) AluSx1|SINE|Alu 10230 NR_036183 100422855 NR_036183 ENSG00000265140 MIR4301 - microRNA 4301 ncRNA chr2-14001 chr2 191000010 191000220 + 5.66 0.000 intron (NM_007315, intron 6 of 24) MER94|DNA|hAT-Blackjack 14135 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr11-8447 chr11 113456934 113457144 + 5.66 0.000 intron (NM_016574, intron 1 of 6) intron (NM_016574, intron 1 of 6) -6951 NR_036183 100422855 NR_036183 ENSG00000265140 MIR4301 - microRNA 4301 ncRNA chr3-9593 chr3 56323672 56323882 + 5.66 0.000 intron (NR_132749, intron 2 of 17) intron (NR_132749, intron 2 of 17) 144690 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr21-753 chr21 42674241 42674451 + 5.66 0.000 intron (NM_001001575, intron 1 of 14) AluJo|SINE|Alu 20594 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chrX-3905 chrX 8781009 8781219 + 5.66 0.000 Intergenic L1MC5|LINE|L1 20223 NM_001171186 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr2-7758 chr2 39039841 39040051 + 5.66 0.000 intron (NM_005633, intron 6 of 22) L1MB8|LINE|L1 -79602 NR_028386 375196 Hs.659035 NR_028386 ENSG00000269210 LOC375196 - uncharacterized LOC375196 ncRNA chr1-10066 chr1 92847753 92847963 + 5.66 0.000 intron (NM_001006605, intron 3 of 4) AluJr|SINE|Alu 7139 NR_002444 26782 Hs.180946 NR_002444 ENSG00000207523 SNORA66 RNU66|U66 small nucleolar RNA, H/ACA box 66 snoRNA chr1-15704 chr1 169119992 169120202 + 5.66 0.000 intron (NM_001677, intron 2 of 5) intron (NM_001677, intron 2 of 5) 13407 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr6-4215 chr6 4317049 4317259 + 5.66 0.000 Intergenic Intergenic -127125 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr19-7034 chr19 50502056 50502266 + 5.66 0.000 Intergenic Intergenic 9030 NM_138334 126119 Hs.467151 NM_138334 ENSG00000161677 JOSD2 SBBI54 Josephin domain containing 2 protein-coding chr11-6217 chr11 46602116 46602326 + 5.66 0.000 TTS (NM_173811) TTS (NM_173811) -8198 NM_001300731 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr13-4344 chr13 102651938 102652148 + 5.66 0.000 intron (NM_001330588, intron 24 of 29) intron (NM_001330588, intron 24 of 29) 42478 NM_001010977 196541 Hs.508623 NM_001010977 ENSG00000139780 METTL21C C13orf39 methyltransferase like 21C protein-coding chr11-4401 chr11 79059226 79059436 + 5.66 0.000 intron (NM_001098816, intron 6 of 33) L2c|LINE|L2 342778 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr7-5945 chr7 100266062 100266272 + 5.66 0.000 intron (NR_028038, intron 1 of 6) AluSz6|SINE|Alu 6038 NR_028038 352954 Hs.556063 NM_178831 ENSG00000239521 CASTOR3 GATS|STAG3OS CASTOR family member 3 protein-coding KI270791.1-1 KI270791.1 186583 186793 + 5.66 0.000 NA NA NA NA chr5-8287 chr5 113628820 113629030 + 5.66 0.000 Intergenic Intergenic 115231 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr3-8648 chr3 176733780 176733990 + 5.66 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger 83116 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr6-3461 chr6 166949050 166949260 + 5.66 0.000 intron (NM_003730, intron 2 of 8) AluSq2|SINE|Alu 7395 NM_003730 8635 Hs.529989 NM_003730 ENSG00000026297 RNASET2 RNASE6PL|bA514O12.3 ribonuclease T2 protein-coding chrX-4113 chrX 25015517 25015727 + 5.66 0.000 exon (NM_139058, exon 1 of 5) exon (NM_139058, exon 1 of 5) 343 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chrX-4219 chrX 37707305 37707515 + 5.66 0.000 intron (NM_021083, intron 2 of 2) SVA_D|Retroposon|SVA 21619 NM_021083 7504 Hs.78919 NM_021083 ENSG00000047597 XK KX|NA|NAC|X1k|XKR1 X-linked Kx blood group protein-coding chr18-2517 chr18 69818922 69819132 + 5.66 0.000 intron (NM_152721, intron 7 of 7) intron (NM_152721, intron 7 of 7) 128846 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr6-7739 chr6 90918457 90918667 + 5.66 0.000 Intergenic Intergenic -331490 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr6-8452 chr6 153974584 153974794 + 5.66 0.000 Intergenic L1ME3|LINE|L1 -35807 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr6-4569 chr6 42783474 42783684 + 5.66 0.000 promoter-TSS (NR_134654) promoter-TSS (NR_134654) 83 NR_134654 401261 Hs.656652 NM_001004322 LOC401261 - uncharacterized LOC401261 ncRNA chr1-15872 chr1 182449746 182449956 + 5.66 0.000 promoter-TSS (NM_001137669) promoter-TSS (NM_001137669) -295 NM_001366934 353299 Hs.121200 NM_032267 ENSG00000121446 RGSL1 RGSL|RGSL2 regulator of G protein signaling like 1 protein-coding chr3-5174 chr3 64570648 64570858 + 5.66 0.000 intron (NM_001318781, intron 27 of 38) L2a|LINE|L2 9407 NR_110150 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr4-5743 chr4 56085347 56085557 + 5.66 0.000 Intergenic MIRc|SINE|MIR -84743 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr8-5869 chr8 14418057 14418267 + 5.66 0.000 intron (NM_001322881, intron 2 of 6) intron (NM_001322881, intron 2 of 6) 435348 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chrX-1340 chrX 135271758 135271968 + 5.66 0.000 intron (NR_110381, intron 1 of 3) LTR53B|LTR|ERVL 19802 NM_001355522 101928677 NM_001355522 ENSG00000238210 ETDA - embryonic testis differentiation homolog A protein-coding chr10-4485 chr10 80552215 80552425 + 5.66 0.000 intron (NM_001145719, intron 1 of 6) intron (NM_001145719, intron 1 of 6) 11501 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr15-4105 chr15 76919717 76919927 + 5.66 0.000 Intergenic MamGypsy2-LTR|LTR|Gypsy -11927 NM_002902 5955 Hs.79088 NM_002902 ENSG00000117906 RCN2 E6BP|ERC-55|ERC55|TCBP49 reticulocalbin 2 protein-coding chr4-4913 chr4 123016217 123016427 + 5.66 0.000 intron (NM_001317799, intron 10 of 10) SVA_D|Retroposon|SVA 93244 NM_001317799 166378 Hs.709648 NM_145207 ENSG00000145375 SPATA5 AFG2|EHLMRS|SPAF spermatogenesis associated 5 protein-coding chr21-1559 chr21 9995357 9995567 + 5.66 0.000 Intergenic LTR16B|LTR|ERVL -174401 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr5-4212 chr5 123164762 123164972 + 5.66 0.000 intron (NM_001136239, intron 5 of 7) LTR16|LTR|ERVL -74551 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr4-8311 chr4 144627474 144627684 + 5.66 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 18440 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA chr20-3561 chr20 3082517 3082727 + 5.66 0.000 TTS (NM_000490) TTS (NM_000490) 2102 NM_000490 551 Hs.89648 NM_000490 ENSG00000101200 AVP ADH|ARVP|AVP-NPII|AVRP|VP arginine vasopressin protein-coding chr1-14458 chr1 47210136 47210346 + 5.66 0.000 Intergenic Intergenic -20205 NM_005764 10158 Hs.431099 NM_005764 ENSG00000162366 PDZK1IP1 DD96|MAP17|SPAP PDZK1 interacting protein 1 protein-coding chr9-6449 chr9 84601365 84601575 + 5.66 0.000 Intergenic Intergenic -66988 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr4-3928 chr4 160888335 160888545 + 5.66 0.000 Intergenic Intergenic -1110656 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr3-8886 chr3 11048460 11048670 + 5.66 0.000 Intergenic L2c|LINE|L2 -29341 NR_046647 100874090 Hs.628542 NR_046647 ENSG00000232287 SLC6A1-AS1 - SLC6A1 antisense RNA 1 ncRNA chr4-8382 chr4 150063240 150063450 + 5.66 0.000 Intergenic Intergenic -15100 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr16-3785 chr16 31083896 31084106 + 5.66 0.000 3' UTR (NM_014699, exon 3 of 3) 3' UTR (NM_014699, exon 3 of 3) 4808 NM_001039503 339105 Hs.569575 NM_001039503 ENSG00000151006 PRSS53 POL3S|UNQ308 serine protease 53 protein-coding chr17-8019 chr17 50006115 50006325 + 5.66 0.000 Intergenic L1M5|LINE|L1 -10996 NM_005220 1747 Hs.134194 NM_005220 ENSG00000064195 DLX3 AI4|TDO distal-less homeobox 3 protein-coding chrX-5408 chrX 152962671 152962881 + 5.66 0.000 intron (NM_007150, intron 17 of 22) intron (NM_007150, intron 17 of 22) 21105 NM_001178115 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr2-13432 chr2 142739772 142739982 + 5.66 0.000 Intergenic AluSp|SINE|Alu -137787 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr8-5531 chr8 67904725 67904935 + 5.66 0.000 Intergenic UCON105|Unknown|Unknown -47216 NM_024870 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chrX-3536 chrX 53929933 53930143 + 5.66 0.000 Intergenic L1MC|LINE|L1 113109 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr5-2565 chr5 22808680 22808890 + 5.66 0.000 intron (NM_004061, intron 1 of 14) (T)n|Simple_repeat|Simple_repeat 44559 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr19-6959 chr19 47699049 47699259 + 5.66 0.000 intron (NM_015711, intron 13 of 14) CpG-14808 -14268 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr12-6726 chr12 5589061 5589271 + 5.66 0.000 intron (NM_001278596, intron 21 of 25) intron (NM_001278596, intron 21 of 25) 95034 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr5-6831 chr5 110231792 110232002 + 5.66 0.000 Intergenic L1MA4A|LINE|L1 282018 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr4-8488 chr4 159586691 159586901 + 5.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 190988 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr16-6736 chr16 74585319 74585529 + 5.66 0.000 intron (NR_027264, intron 1 of 26) intron (NR_027264, intron 1 of 26) 21690 NM_012201 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr8-7445 chr8 141051898 141052108 + 5.66 0.000 Intergenic L1MEg|LINE|L1 -49924 NM_001352699 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr7-7704 chr7 158084538 158084748 + 5.66 0.000 intron (NM_130843, intron 9 of 21) intron (NM_130843, intron 9 of 21) 230058 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr13-4079 chr13 77035193 77035403 + 5.66 0.000 Intergenic MIR|SINE|MIR -8139 NM_012158 26224 Hs.508284 NM_012158 ENSG00000005812 FBXL3 FBL3|FBL3A|FBXL3A|IDDSFAS F-box and leucine rich repeat protein 3 protein-coding chr5-7901 chr5 75990801 75991011 + 5.66 0.000 Intergenic MER76|LTR|ERVL -92477 NM_001297716 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr2-11018 chr2 106330688 106330898 + 5.66 0.000 Intergenic MER11A|LTR|ERVK -38952 NR_157576 402096 NR_157576 LOC402096 - anaphase promoting complex subunit 1 pseudogene pseudo chr20-3506 chr20 62801325 62801535 + 5.66 0.000 non-coding (NR_136405, exon 5 of 5) non-coding (NR_136405, exon 5 of 5) -3405 NM_007346 11054 Hs.67896 NM_007346 ENSG00000060491 OGFR - opioid growth factor receptor protein-coding chr1-11785 chr1 23700025 23700235 + 5.66 0.000 Intergenic Intergenic 8324 NM_000975 6135 Hs.719951 NM_000975 ENSG00000142676 RPL11 DBA7|GIG34|L11|uL5 ribosomal protein L11 protein-coding chr9-8399 chr9 119575648 119575858 + 5.66 0.000 Intergenic L2c|LINE|L2 -206318 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr8-3217 chr8 130371809 130372019 + 5.66 0.000 intron (NM_001247996, intron 2 of 30) intron (NM_001247996, intron 2 of 30) 71746 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr2-14010 chr2 191166197 191166407 + 5.66 0.000 Intergenic Intergenic -14706 NM_001243835 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr3-6299 chr3 74729341 74729551 + 5.66 0.000 Intergenic (TTG)n|Simple_repeat|Simple_repeat -208306 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr10-3001 chr10 97196393 97196603 + 5.66 0.000 intron (NR_037909, intron 11 of 14) CpG -10539 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr13-1499 chr13 113162763 113162973 + 5.66 0.000 intron (NM_003891, intron 3 of 7) intron (NM_003891, intron 3 of 7) 4214 NM_001256134 8858 Hs.1011 NM_003891 ENSG00000126231 PROZ PZ protein Z, vitamin K dependent plasma glycoprotein protein-coding chr17-7425 chr17 10384588 10384798 + 5.66 0.000 intron (NR_125367, intron 1 of 10) intron (NR_125367, intron 1 of 10) 1561 NR_125367 100128560 Hs.661174 NR_125367 MYHAS - myosin heavy chain gene cluster antisense RNA ncRNA chr19-5855 chr19 44511328 44511538 + 5.66 0.000 intron (NM_001102600, intron 9 of 10) intron (NM_001102600, intron 9 of 10) -10911 NM_001288759 7733 Hs.22305 NM_013256 ENSG00000167384 ZNF180 HHZ168 zinc finger protein 180 protein-coding chr1-9352 chr1 28849260 28849470 + 5.66 0.000 intron (NM_000911, intron 1 of 2) HAL1|LINE|L1 37195 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chr20-4143 chr20 43811402 43811612 + 5.66 0.000 Intergenic AluSz|SINE|Alu -83211 NR_134577 105372626 Hs.130555 NR_134577 ENSG00000233277 LINC01728 - long intergenic non-protein coding RNA 1728 ncRNA chr8-5442 chr8 38128220 38128430 + 5.66 0.000 exon (NM_001282272, exon 10 of 15) exon (NM_001282272, exon 10 of 15) 22532 NM_001105214 9070 Hs.521530 NM_004674 ENSG00000129691 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ASH2 like, histone lysine methyltransferase complex subunit protein-coding chr11-10445 chr11 117059501 117059711 + 5.66 0.000 intron (NM_001366687, intron 1 of 4) L1MC2|LINE|L1 38822 NM_001281749 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr10-5888 chr10 117556437 117556647 + 5.66 0.000 Intergenic Intergenic -11474 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr2-10492 chr2 222383165 222383375 + 5.66 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -40718 NM_001320834 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr1-5444 chr1 44347610 44347820 + 5.66 0.000 intron (NM_001301699, intron 1 of 7) intron (NM_001301699, intron 1 of 7) 7542 NM_024066 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding chr20-2182 chr20 48099546 48099756 + 5.66 0.000 Intergenic Intergenic -109534 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA chr5-8742 chr5 146325273 146325483 + 5.66 0.000 Intergenic L2b|LINE|L2 -13461 NM_002700 5459 Hs.553499 NM_002700 ENSG00000091010 POU4F3 BRN3C|DFNA15|DFNA42|DFNA52 POU class 4 homeobox 3 protein-coding chr1-11069 chr1 226494765 226494975 + 5.66 0.000 Intergenic AluSg|SINE|Alu -53894 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr12-6401 chr12 73882317 73882527 + 5.66 0.000 Intergenic THE1C|LTR|ERVL-MaLR 410209 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr4-8102 chr4 125279738 125279948 + 5.66 0.000 Intergenic Charlie3|DNA|hAT-Charlie -36569 NM_001291285 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr2-8830 chr2 171560961 171561171 + 5.66 0.000 Intergenic HERV17-int|LTR|ERV1 38592 NM_001127383 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr5-7260 chr5 12289636 12289846 + 5.66 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -285116 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA chr9-8549 chr9 126888864 126889074 + 5.66 0.000 Intergenic AluSc|SINE|Alu -25805 NM_001190729 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr1-10206 chr1 113293704 113293914 + 5.66 0.000 Intergenic Intergenic -87556 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr8-4441 chr8 111837336 111837546 + 5.66 0.000 Intergenic L1MA8|LINE|L1 460802 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chrX-5166 chrX 132566035 132566245 + 5.66 0.000 Intergenic Intergenic -76105 NM_001170704 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr19-5543 chr19 53366472 53366682 + 5.66 0.000 intron (NR_145446, intron 1 of 4) intron (NR_145446, intron 1 of 4) 872 NM_001348156 170958 Hs.352638 NM_001348156 ENSG00000203326 ZNF525 - zinc finger protein 525 protein-coding chr14-4040 chr14 54497974 54498184 + 5.66 0.000 Intergenic HERV35I-int|LTR|ERV1 -9099 NM_004124 2764 Hs.151413 NM_004124 ENSG00000197045 GMFB GMF glia maturation factor beta protein-coding chr7-5536 chr7 45276407 45276617 + 5.66 0.000 Intergenic AluJr|SINE|Alu 118721 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr2-12903 chr2 99550221 99550431 + 5.66 0.000 3' UTR (NM_002285, exon 24 of 24) 3' UTR (NM_002285, exon 24 of 24) -60309 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr4-6755 chr4 6230472 6230682 + 5.66 0.000 intron (NR_037863, intron 3 of 3) intron (NR_037863, intron 3 of 3) 29844 NR_037863 285484 Hs.479068 NR_037863 LINC02495 - long intergenic non-protein coding RNA 2495 ncRNA chr8-5764 chr8 141751762 141751972 + 5.66 0.000 Intergenic Intergenic 34446 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr10-8389 chr10 82360024 82360234 + 5.66 0.000 intron (NR_163253, intron 3 of 10) intron (NR_163253, intron 3 of 10) -127209 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr13-2275 chr13 28313705 28313915 + 5.66 0.000 intron (NM_002019, intron 25 of 29) intron (NM_002019, intron 25 of 29) -174636 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chrX-3972 chrX 13216175 13216385 + 5.66 0.000 Intergenic Intergenic 87172 NR_146309 109729169 Hs.348675 NR_146309 LINC02154 - long intergenic non-protein coding RNA 2154 ncRNA chr1-14866 chr1 79843276 79843486 + 5.66 0.000 Intergenic Intergenic -692374 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr12-6695 chr12 4189262 4189472 + 5.66 0.000 Intergenic Intergenic -84395 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chr16-6126 chr16 19368225 19368435 + 5.66 0.000 Intergenic MLT2A1|LTR|ERVL -42209 NM_001308161 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr8-6508 chr8 65558832 65559042 + 5.66 0.000 intron (NR_033893, intron 1 of 4) L2a|LINE|L2 3729 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr9-8529 chr9 126217549 126217759 + 5.66 0.000 Intergenic Intergenic 58261 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr2-8156 chr2 84509019 84509229 + 5.66 0.000 Intergenic L1PA4|LINE|L1 -7331 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chr8-6613 chr8 74956277 74956487 + 5.66 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -28123 NM_031461 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr2-8602 chr2 140315563 140315773 + 5.66 0.000 intron (NM_018557, intron 82 of 90) intron (NM_018557, intron 82 of 90) 271017 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2-6368 chr2 106886815 106887025 + 5.66 0.000 promoter-TSS (NM_001142351) promoter-TSS (NM_001142351) -51 NM_001322362 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr1-11604 chr1 222390196 222390406 + 5.66 0.000 Intergenic Intergenic 157803 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr14-3440 chr14 99272127 99272337 + 5.66 0.000 promoter-TSS (NM_138576) promoter-TSS (NM_138576) -35 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr16-5179 chr16 5761578 5761788 + 5.66 0.000 Intergenic THE1B|LTR|ERVL-MaLR 129216 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA chr2-4757 chr2 15611500 15611710 + 5.66 0.000 intron (NM_004939, intron 13 of 25) SVA_D|Retroposon|SVA 19737 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr14-5312 chr14 101654854 101655064 + 5.66 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -75478 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr12-4483 chr12 18747253 18747463 + 5.66 0.000 Intergenic LTR33|LTR|ERVL 9239 NM_033328 93661 Hs.131288 NM_033328 ENSG00000177938 CAPZA3 CAPPA3|Gsg3|HEL-S-86 capping actin protein of muscle Z-line subunit alpha 3 protein-coding chr8-2240 chr8 31755282 31755492 + 5.66 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) 115635 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr5-8160 chr5 102740582 102740792 + 5.66 0.000 Intergenic FRAM|SINE|Alu -14096 NM_001319943 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr12-7117 chr12 46221804 46222014 + 5.66 0.000 intron (NM_030674, intron 5 of 16) L2b|LINE|L2 44607 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr15-3927 chr15 38024264 38024474 + 5.66 0.000 Intergenic MER76|LTR|ERVL -16024 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LINC02345 - long intergenic non-protein coding RNA 2345 ncRNA chr3-7237 chr3 194988090 194988300 + 5.66 0.000 Intergenic Intergenic -106393 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr4-7039 chr4 27372917 27373127 + 5.66 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 155543 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr7-6138 chr7 123726931 123727141 + 5.66 0.000 intron (NM_003941, intron 1 of 10) L1ME2|LINE|L1 21967 NM_003941 8976 Hs.143728 NM_003941 ENSG00000106299 WASL N-WASP|NWASP|WASPB WASP like actin nucleation promoting factor protein-coding chr2-10127 chr2 69191624 69191834 + 5.66 0.000 intron (NM_032208, intron 16 of 17) intron (NM_032208, intron 16 of 17) 88047 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr1-9680 chr1 50578384 50578594 + 5.66 0.000 intron (NM_007051, intron 12 of 18) intron (NM_007051, intron 12 of 18) -155046 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr11-9239 chr11 41936718 41936928 + 5.66 0.000 Intergenic MIR3|SINE|MIR 148635 NR_135065 101928591 Hs.149771 NR_135065 LINC02745 - long intergenic non-protein coding RNA 2745 ncRNA chr22-1574 chr22 44024183 44024393 + 5.66 0.000 promoter-TSS (NM_013327) promoter-TSS (NM_013327) 11 NM_013327 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr12-3966 chr12 12660491 12660701 + 5.66 0.000 TTS (NM_006143) TTS (NM_006143) 35587 NM_006143 2842 Hs.657862 NM_006143 ENSG00000183150 GPR19 - G protein-coupled receptor 19 protein-coding chr15-3490 chr15 97188292 97188502 + 5.66 0.000 Intergenic Intergenic 333414 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chrX-4165 chrX 31923903 31924113 + 5.66 0.000 intron (NM_000109, intron 47 of 78) intron (NM_000109, intron 47 of 78) 231461 NM_004013 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr11-7390 chr11 78664853 78665063 + 5.66 0.000 intron (NM_001098816, intron 32 of 33) intron (NM_001098816, intron 32 of 33) -90094 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr19-6306 chr19 8708352 8708562 + 5.66 0.000 Intergenic L1PA5|LINE|L1 -9662 NM_178525 284382 Hs.209206 NM_178525 ENSG00000181786 ACTL9 HSD21 actin like 9 protein-coding chr4-3631 chr4 13507050 13507260 + 5.66 0.000 Intergenic Intergenic -22790 NM_001159601 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr2-10559 chr2 239349767 239349977 + 5.66 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) 1932 NR_039948 100616360 NR_039948 ENSG00000264292 MIR2467 mir-2467 microRNA 2467 ncRNA chr6-7744 chr6 91387586 91387796 + 5.66 0.000 Intergenic L1PB1|LINE|L1 -133969 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr9-8717 chr9 131716178 131716388 + 5.66 0.000 intron (NM_001304275, intron 1 of 23) intron (NM_001304275, intron 1 of 23) -6441 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr14-4119 chr14 69921297 69921507 + 5.66 0.000 intron (NM_001034852, intron 1 of 11) intron (NM_001034852, intron 1 of 11) 41986 NM_001034852 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding chr6-7312 chr6 44360316 44360526 + 5.66 0.000 intron (NM_145026, intron 3 of 8) intron (NM_145026, intron 3 of 8) 17761 NM_145026 221409 Hs.135283 NM_145026 ENSG00000249481 SPATS1 DDIP|SPATA8|SRSP1 spermatogenesis associated serine rich 1 protein-coding chr10-8072 chr10 67289133 67289343 + 5.66 0.000 intron (NM_001127384, intron 5 of 17) intron (NM_001127384, intron 5 of 17) 114172 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chrX-5372 chrX 150372213 150372423 + 5.66 0.000 intron (NM_001177465, intron 1 of 4) intron (NM_001177465, intron 1 of 4) 9001 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr6-4108 chr6 151805331 151805541 + 5.66 0.000 promoter-TSS (NM_001291241) promoter-TSS (NM_001291241) -237 NM_001122741 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr19-5903 chr19 47871739 47871949 + 5.66 0.000 intron (NM_003167, intron 5 of 5) L2a|LINE|L2 14471 NM_003167 6822 Hs.515835 NM_003167 ENSG00000105398 SULT2A1 DHEA-ST|DHEAS|HST|ST2|ST2A1|ST2A3|STD|hSTa sulfotransferase family 2A member 1 protein-coding chr2-12151 chr2 38402468 38402678 + 5.66 0.000 Intergenic (CTCTCC)n|Simple_repeat|Simple_repeat -23989 NM_001330462 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chrX-3819 chrX 145760459 145760669 + 5.66 0.000 Intergenic AluY|SINE|Alu -57265 NM_001144004 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr3-8761 chr3 2707147 2707357 + 5.66 0.000 intron (NM_175607, intron 4 of 24) AluJb|SINE|Alu -184963 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr8-4323 chr8 99727921 99728131 + 5.66 0.000 intron (NM_017890, intron 39 of 61) MamRep605|LTR?|LTR? 165681 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr2-7035 chr2 154645373 154645583 + 5.66 0.000 Intergenic Intergenic -53103 NM_001260508 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr6-7170 chr6 37593975 37594185 + 5.66 0.000 Intergenic Intergenic -38658 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr7-7010 chr7 126214486 126214696 + 5.66 0.000 Intergenic AluSz|SINE|Alu 843593 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr15-4993 chr15 80197451 80197661 + 5.66 0.000 3' UTR (NM_001352888, exon 3 of 3) 3' UTR (NM_001352888, exon 3 of 3) 44557 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr4-7149 chr4 38520187 38520397 + 5.66 0.000 intron (NR_110951, intron 1 of 7) L1MC3|LINE|L1 2888 NR_110951 101928776 Hs.586147 NR_110951 ENSG00000249534 LINC01258 - long intergenic non-protein coding RNA 1258 ncRNA chr5-7625 chr5 46044030 46044240 + 5.66 0.000 Intergenic ALR/Alpha|Satellite|centr -347755 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr17-6403 chr17 1264024 1264234 + 5.66 0.000 Intergenic Intergenic -6435 NM_001164405 727857 Hs.723790 NM_001164405 ENSG00000205899 BHLHA9 BHLHF42|CCSPD basic helix-loop-helix family member a9 protein-coding chr4-7124 chr4 36190005 36190215 + 5.66 0.000 intron (NR_146894, intron 7 of 32) L2c|LINE|L2 53829 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr3-9800 chr3 73054348 73054558 + 5.66 0.000 intron (NM_001318026, intron 3 of 8) intron (NM_001318026, intron 3 of 8) -7206 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr17-6050 chr17 79360982 79361192 + 5.66 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 155061 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr7-7616 chr7 132909653 132909863 + 5.66 0.000 intron (NM_001317177, intron 4 of 8) intron (NM_001317177, intron 4 of 8) 125157 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr17-6778 chr17 3129668 3129878 + 5.66 0.000 Intergenic AluSx|SINE|Alu -2222 NM_003555 8390 Hs.248183 NM_003555 ENSG00000183024 OR1G1 OR17-130|OR17-209|OR1G2 olfactory receptor family 1 subfamily G member 1 protein-coding chr11-10221 chr11 98239001 98239211 + 5.66 0.000 Intergenic L1PA17|LINE|L1 -781843 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr22-4145 chr22 44776658 44776868 + 5.66 0.000 intron (NM_181335, intron 1 of 11) intron (NM_181335, intron 1 of 11) 24205 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr8-3720 chr8 20793094 20793304 + 5.66 0.000 Intergenic Intergenic -160434 NR_130774 102467222 Hs.444226 NR_130773 ENSG00000253147 LOC102467222 - uncharacterized LOC102467222 ncRNA chrX-4180 chrX 34021200 34021410 + 5.66 0.000 Intergenic MSTD|LTR|ERVL-MaLR 111025 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr6-4957 chr6 103489062 103489272 + 5.66 0.000 Intergenic SATR1|Satellite|Satellite 1370379 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr6-4595 chr6 43949951 43950161 + 5.66 0.000 Intergenic Intergenic -50529 NR_160955 221416 Hs.531926 NM_153246 ENSG00000181577 C6orf223 - chromosome 6 open reading frame 223 ncRNA chr4-7673 chr4 87074095 87074305 + 5.66 0.000 intron (NM_005935, intron 3 of 19) intron (NM_005935, intron 3 of 19) 67199 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr16-4683 chr16 79523829 79524039 + 5.66 0.000 Intergenic Intergenic 76803 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr11-3482 chr11 89560945 89561155 + 5.66 0.000 intron (NM_001143837, intron 1 of 20) (TA)n|Simple_repeat|Simple_repeat 28507 NM_001143837 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr1-14262 chr1 36879850 36880060 + 5.66 0.000 intron (NM_000831, intron 3 of 15) intron (NM_000831, intron 3 of 15) 154560 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr18-3411 chr18 62841258 62841468 + 5.66 0.000 intron (NM_194449, intron 3 of 16) AluSx3|SINE|Alu 125822 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chrX-3925 chrX 9634311 9634521 + 5.66 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 131431 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr22-3783 chr22 29205915 29206125 + 5.66 0.000 5' UTR (NM_133455, exon 1 of 15) 5' UTR (NM_133455, exon 1 of 15) 124 NM_133455 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr8-6399 chr8 55831590 55831800 + 5.66 0.000 Intergenic AluSx1|SINE|Alu -48140 NM_002350 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chr3-8934 chr3 13630700 13630910 + 5.66 0.000 exon (NM_001998, exon 14 of 17) exon (NM_001998, exon 14 of 17) 12424 NR_132775 106635526 NR_132775 SNORA93 - small nucleolar RNA, H/ACA box 93 snoRNA chr22-3173 chr22 30466988 30467198 + 5.66 0.000 intron (NM_174975, intron 5 of 11) intron (NM_174975, intron 5 of 11) 4954 NM_001257382 266629 Hs.505601 NM_174975 ENSG00000100012 SEC14L3 TAP2 SEC14 like lipid binding 3 protein-coding chr15-3045 chr15 59870306 59870516 + 5.66 0.000 Intergenic Intergenic -133900 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr2-12723 chr2 80883991 80884201 + 5.66 0.000 Intergenic L2c|LINE|L2 570717 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr13-3571 chr13 26430553 26430763 + 5.66 0.000 Intergenic L1P4|LINE|L1 -127025 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr10-4171 chr10 93271633 93271843 + 5.66 0.000 Intergenic Intergenic 197845 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr2-13725 chr2 167847347 167847557 + 5.66 0.000 intron (NM_020981, intron 1 of 1) L1PB1|LINE|L1 28780 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr17-8542 chr17 79605426 79605636 + 5.66 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 5520 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr2-7822 chr2 46365968 46366178 + 5.66 0.000 intron (NM_001430, intron 6 of 15) MamRep434|DNA|TcMar-Tigger 28094 NR_146999 105374582 Hs.570163 NR_146999 ENSG00000228100 LINC01820 - long intergenic non-protein coding RNA 1820 ncRNA chr1-15335 chr1 119793716 119793926 + 5.66 0.000 TTS (NM_001159352) TTS (NM_001159352) 17639 NM_001159353 83998 Hs.660883 NM_032044 ENSG00000134193 REG4 GISP|REG-IV|RELP regenerating family member 4 protein-coding chr1-9024 chr1 11654235 11654445 + 5.66 0.000 promoter-TSS (NR_130909) promoter-TSS (NR_130909) -67 NM_183412 93611 Hs.556006 NM_033182 ENSG00000132879 FBXO44 FBG3|FBX30|FBX6A|Fbx44|Fbxo6a F-box protein 44 protein-coding chrX-4000 chrX 15911560 15911770 + 5.66 0.000 Intergenic Intergenic -56852 NM_001272071 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr10-8677 chr10 100928090 100928300 + 5.66 0.000 intron (NM_018121, intron 6 of 19) intron (NM_018121, intron 6 of 19) 15232 NM_018121 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr11-9030 chr11 26506314 26506524 + 5.66 0.000 intron (NM_001313727, intron 1 of 23) MIRb|SINE|MIR 32517 NM_001313727 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr6-4882 chr6 90310612 90310822 + 5.66 0.000 Intergenic Intergenic -2025 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr10-6272 chr10 80889739 80889949 + 5.66 0.000 Intergenic Intergenic 240047 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr20-2200 chr20 53785032 53785242 + 5.66 0.000 Intergenic AluSp|SINE|Alu 90572 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr16-4136 chr16 4111482 4111692 + 5.66 0.000 intron (NM_001116, intron 2 of 10) intron (NM_001116, intron 2 of 10) 4855 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr3-3255 chr3 51068541 51068751 + 5.66 0.000 intron (NM_004947, intron 6 of 52) MIRb|SINE|MIR -316645 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr17-8139 chr17 58900527 58900737 + 5.66 0.000 intron (NM_014906, intron 1 of 6) Tigger1|DNA|TcMar-Tigger 144763 NR_048561 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding chr4-7610 chr4 82253586 82253796 + 5.66 0.000 Intergenic AluJb|SINE|Alu 120300 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr20-2497 chr20 33341354 33341564 + 5.66 0.000 Intergenic AluSz6|SINE|Alu 58245 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr3-9541 chr3 52700156 52700366 + 5.66 0.000 intron (NM_001278281, intron 4 of 10) intron (NM_001278281, intron 4 of 10) 3437 NM_152932 55830 Hs.297304 NM_018446 ENSG00000016864 GLT8D1 AD-017|MSTP139 glycosyltransferase 8 domain containing 1 protein-coding chr3-9407 chr3 48367383 48367593 + 5.66 0.000 Intergenic Intergenic -4731 NM_001159929 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding chrX-3589 chrX 78064106 78064316 + 5.66 0.000 Intergenic LTR1E|LTR|ERV1 -40037 NM_000291 5230 Hs.78771 NM_000291 ENSG00000102144 PGK1 HEL-S-68p|MIG10|PGKA phosphoglycerate kinase 1 protein-coding chr8-6396 chr8 55548801 55549011 + 5.66 0.000 Intergenic MLT2A2|LTR|ERVL -27928 NR_134323 105375843 Hs.662416 NR_134323 ENSG00000254357 LOC105375843 - uncharacterized LOC105375843 ncRNA chr4-8637 chr4 174717591 174717801 + 5.66 0.000 intron (NM_006529, intron 4 of 9) intron (NM_006529, intron 4 of 9) 111551 NM_006529 8001 Hs.413099 NM_006529 ENSG00000145451 GLRA3 - glycine receptor alpha 3 protein-coding chr22-2906 chr22 46398833 46399043 + 5.66 0.000 intron (NM_014246, intron 10 of 34) intron (NM_014246, intron 10 of 34) 63224 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr19-6790 chr19 41239204 41239414 + 5.66 0.000 exon (NM_021913, exon 9 of 20) exon (NM_021913, exon 9 of 20) 12554 NM_001278599 558 Hs.590970 NM_001699 ENSG00000167601 AXL ARK|JTK11|Tyro7|UFO AXL receptor tyrosine kinase protein-coding chr8-5458 chr8 42109210 42109420 + 5.66 0.000 Intergenic AluSz6|SINE|Alu -43631 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr11-10051 chr11 83822549 83822759 + 5.66 0.000 intron (NM_001142699, intron 17 of 27) intron (NM_001142699, intron 17 of 27) -140229 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr1-15657 chr1 164862450 164862660 + 5.66 0.000 intron (NM_001353131, intron 7 of 7) intron (NM_001353131, intron 7 of 7) -87914 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr7-4593 chr7 15633417 15633627 + 5.66 0.000 intron (NM_005924, intron 1 of 2) intron (NM_005924, intron 1 of 2) -34425 NR_134258 105375166 Hs.658822 NR_134258 ENSG00000237070 LOC105375166 - uncharacterized LOC105375166 ncRNA chr4-8716 chr4 183183377 183183587 + 5.66 0.000 intron (NM_024949, intron 1 of 22) L1ME4c|LINE|L1 57152 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr4-5029 chr4 140559929 140560139 + 5.66 0.000 intron (NM_021833, intron 5 of 5) intron (NM_021833, intron 5 of 5) 8927 NM_021833 7350 Hs.249211 NM_021833 ENSG00000109424 UCP1 SLC25A7|UCP uncoupling protein 1 protein-coding chr14-3218 chr14 74345224 74345434 + 5.66 0.000 Intergenic AluJo|SINE|Alu -3142 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr5-9070 chr5 171269499 171269709 + 5.66 0.000 intron (NM_022897, intron 25 of 27) intron (NM_022897, intron 25 of 27) -39644 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr4-5500 chr4 81805181 81805391 + 5.66 0.000 Intergenic Intergenic -333379 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chrX-3684 chrX 107325459 107325669 + 5.66 0.000 Intergenic MER52A|LTR|ERV1 118932 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr18-3435 chr18 64774652 64774862 + 5.66 0.000 Intergenic MIRb|SINE|MIR -514702 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr2-14541 chr2 230164119 230164329 + 5.66 0.000 Intergenic Intergenic 55760 NM_004510 3431 Hs.145150 NM_004509 ENSG00000135899 SP110 IFI41|IFI75|IPR1|VODI SP110 nuclear body protein protein-coding chr1-13724 chr1 15513165 15513375 + 5.66 0.000 intron (NR_102733, intron 2 of 8) L2a|LINE|L2 10945 NM_001229 842 Hs.329502 NM_001229 ENSG00000132906 CASP9 APAF-3|APAF3|ICE-LAP6|MCH6|PPP1R56 caspase 9 protein-coding chr2-11602 chr2 2672475 2672685 + 5.66 0.000 Intergenic Intergenic -341305 NM_001329851 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr4-3822 chr4 118867360 118867570 + 5.66 0.000 intron (NM_001286754, intron 1 of 4) intron (NM_001286754, intron 1 of 4) 16784 NM_001286754 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr5-4373 chr5 172551029 172551239 + 5.66 0.000 Intergenic Intergenic 7880 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr17-6514 chr17 30805892 30806102 + 5.66 0.000 intron (NM_015986, intron 1 of 7) AluJb|SINE|Alu 18695 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr4-6469 chr4 145870992 145871202 + 5.66 0.000 intron (NM_178835, intron 4 of 14) intron (NM_178835, intron 4 of 14) 67726 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr22-3712 chr22 25117215 25117425 + 5.66 0.000 intron (NM_001145206, intron 4 of 10) MIR1_Amn|SINE|MIR -4628 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr7-9555 chr7 141437509 141437719 + 5.66 0.000 exon (NM_001195278, exon 3 of 4) exon (NM_001195278, exon 3 of 4) -113796 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr5-7371 chr5 20079499 20079709 + 5.66 0.000 intron (NM_001291956, intron 2 of 14) L1MA7|LINE|L1 -91404 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr17-7384 chr17 7908920 7909130 + 5.66 0.000 intron (NM_001005273, intron 36 of 39) intron (NM_001005273, intron 36 of 39) 2902 NR_003000 677763 NR_003000 ENSG00000252835 SCARNA21 ACA68|SCARNA21A small Cajal body-specific RNA 21 ncRNA chr12-6429 chr12 83343408 83343618 + 5.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 656358 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr5-7824 chr5 67021006 67021216 + 5.66 0.000 intron (NM_001297651, intron 1 of 25) intron (NM_001297651, intron 1 of 25) 16456 NM_001290227 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chrX-5350 chrX 148995933 148996143 + 5.66 0.000 3' UTR (NM_001169122, exon 20 of 20) 3' UTR (NM_001169122, exon 20 of 20) 276947 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr9-8062 chr9 97762764 97762974 + 5.66 0.000 intron (NR_147055, intron 5 of 10) L2c|LINE|L2 -65460 NM_000380 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr3-9664 chr3 62189114 62189324 + 5.66 0.000 intron (NM_002841, intron 8 of 29) intron (NM_002841, intron 8 of 29) 129728 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr2-11367 chr2 209052012 209052222 + 5.66 0.000 Intergenic L1PB3|LINE|L1 -371930 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr3-9958 chr3 95053216 95053426 + 5.66 0.000 Intergenic LTR48B|LTR|ERV1 115058 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr3-8530 chr3 141194692 141194902 + 5.66 0.000 Intergenic L1PA13|LINE|L1 -37028 NM_001282728 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr12-7301 chr12 53804272 53804482 + 5.66 0.000 Intergenic MIRc|SINE|MIR -47343 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr5-6668 chr5 58452721 58452931 + 5.66 0.000 Intergenic L2b|LINE|L2 7260 NM_006622 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding chr2-14071 chr2 198215247 198215457 + 5.66 0.000 Intergenic AluSz|SINE|Alu 159745 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr15-5233 chr15 96887832 96888042 + 5.66 0.000 Intergenic Intergenic 104502 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr3-8907 chr3 12796794 12797004 + 5.66 0.000 intron (NM_001162499, intron 1 of 14) intron (NM_001162499, intron 1 of 14) 219 NM_012298 23066 Hs.343664 NM_012298 ENSG00000144712 CAND2 TIP120B|Tp120b cullin associated and neddylation dissociated 2 (putative) protein-coding chr16-6430 chr16 56436326 56436536 + 5.66 0.000 intron (NM_007006, intron 4 of 6) MIRb|SINE|MIR -10886 NM_001144 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr20-3029 chr20 60034163 60034373 + 5.66 0.000 Intergenic Intergenic -21657 NR_126504 284756 Hs.335319 NR_126504 ENSG00000176659 C20orf197 - chromosome 20 open reading frame 197 ncRNA chr15-3059 chr15 60878512 60878722 + 5.66 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 197048 NR_120319 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr3-11074 chr3 184599900 184600110 + 5.66 0.000 Intergenic L2a|LINE|L2 38220 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr5-8942 chr5 159248772 159248982 + 5.66 0.000 Intergenic MIR|SINE|MIR -14413 NM_145049 134510 Hs.591733 NM_145049 ENSG00000164332 UBLCP1 CPUB1 ubiquitin like domain containing CTD phosphatase 1 protein-coding chr21-1761 chr21 35858820 35859030 + 5.66 0.000 Intergenic Intergenic -27520 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr1-6525 chr1 26945599 26945809 + 5.66 0.000 intron (NM_006600, intron 8 of 8) intron (NM_006600, intron 8 of 8) 14764 NM_152365 126695 Hs.188881 NM_152365 ENSG00000175707 KDF1 C1orf172|ECTD12 keratinocyte differentiation factor 1 protein-coding chr1-16614 chr1 238631626 238631836 + 5.66 0.000 Intergenic L1PB|LINE|L1 -145714 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr2-12259 chr2 44896497 44896707 + 5.66 0.000 Intergenic Intergenic 42286 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr4-5838 chr4 105530479 105530689 + 5.66 0.000 Intergenic L2a|LINE|L2 -22036 NM_001242729 54848 Hs.585224 NM_017700 ENSG00000236699 ARHGEF38 - Rho guanine nucleotide exchange factor 38 protein-coding chr18-3077 chr18 32646088 32646298 + 5.66 0.000 Intergenic MLT2C1|LTR|ERVL 126830 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr17-5723 chr17 57619602 57619812 + 5.66 0.000 intron (NM_001322250, intron 9 of 13) intron (NM_001322250, intron 9 of 13) -11295 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA chr3-11043 chr3 182967950 182968160 + 5.66 0.000 intron (NM_001308101, intron 1 of 6) intron (NM_001308101, intron 1 of 6) 12483 NM_020640 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr10-8421 chr10 85142118 85142328 + 5.66 0.000 Intergenic LTR12C|LTR|ERV1 56682 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr2-13024 chr2 108167138 108167348 + 5.66 0.000 TTS (NR_131251) TTS (NR_131251) 50598 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA chr17-3858 chr17 46949749 46949959 + 5.66 0.000 intron (NM_001321133, intron 6 of 6) L2c|LINE|L2 -23163 NR_049812 100847067 NR_049812 ENSG00000264999 MIR5089 - microRNA 5089 ncRNA chr13-2434 chr13 46818080 46818290 + 5.66 0.000 Intergenic MER52C|LTR|ERV1 -21024 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr2-13946 chr2 185466305 185466515 + 5.66 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 272309 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr18-1540 chr18 13298469 13298679 + 5.66 0.000 intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 20469 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr3-7296 chr3 11412248 11412458 + 5.66 0.000 intron (NM_001144912, intron 16 of 16) LOR1b|LTR|ERV1 139956 NM_001349232 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chrX-3358 chrX 140389268 140389478 + 5.66 0.000 Intergenic Intergenic 115687 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr21-976 chr21 5123848 5124058 + 5.66 0.000 intron (NM_001363758, intron 4 of 6) intron (NM_001363758, intron 4 of 6) 4416 NM_001363758 102724023 Hs.413482 NM_001363758 ENSG00000280071 GATD3B KNP-I glutamine amidotransferase like class 1 domain containing 3B protein-coding chr1-8848 chr1 3338917 3339127 + 5.66 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -115643 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr1-15027 chr1 93232497 93232707 + 5.66 0.000 intron (NM_001306076, intron 18 of 28) intron (NM_001306076, intron 18 of 28) 51886 NM_206886 343099 Hs.482873 NM_206886 ENSG00000122483 CCDC18 NY-SAR-41 coiled-coil domain containing 18 protein-coding chr10-7581 chr10 18376395 18376605 + 5.66 0.000 intron (NM_201590, intron 1 of 12) LTR19A|LTR|ERV1 -24075 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr13-3829 chr13 47831280 47831490 + 5.66 0.000 Intergenic Intergenic 101237 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr2-13873 chr2 179172313 179172523 + 5.66 0.000 intron (NM_178123, intron 4 of 17) intron (NM_178123, intron 4 of 17) 92414 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr9-4207 chr9 36964840 36965050 + 5.66 0.000 intron (NR_104000, intron 6 of 9) L2b|LINE|L2 69323 NM_016734 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr20-4169 chr20 44583265 44583475 + 5.66 0.000 intron (NM_181804, intron 2 of 4) intron (NM_181804, intron 2 of 4) 791 NM_001281445 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr8-7293 chr8 131827410 131827620 + 5.66 0.000 Intergenic Intergenic -76578 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr7-7917 chr7 7615832 7616042 + 5.66 0.000 Intergenic Intergenic -24815 NM_001302348 729852 Hs.652371 NM_001302348 ENSG00000219545 UMAD1 RPA3-AS1|RPA3OS UBAP1-MVB12-associated (UMA) domain containing 1 protein-coding chr17-8224 chr17 64516258 64516468 + 5.66 0.000 intron (NM_001316990, intron 4 of 18) intron (NM_001316990, intron 4 of 18) 9386 NM_001316990 90799 Hs.569713 NM_138363 ENSG00000258890 CEP95 CCDC45 centrosomal protein 95 protein-coding chr16-4666 chr16 76878898 76879108 + 5.66 0.000 Intergenic Intergenic 10067 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr1-12424 chr1 11439343 11439553 + 5.66 0.000 Intergenic Intergenic -39707 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr17-6854 chr17 20380767 20380977 + 5.66 0.000 intron (NR_023380, intron 12 of 15) L1PA16|LINE|L1 -29644 NR_146076 347716 Hs.745055 NR_146076 USP32P3 - ubiquitin specific peptidase 32 pseudogene 3 pseudo chr6-8549 chr6 161659241 161659451 + 5.66 0.000 intron (NM_004562, intron 7 of 11) intron (NM_004562, intron 7 of 11) 188369 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr8-5083 chr8 42467073 42467283 + 5.66 0.000 intron (NM_006749, intron 2 of 10) intron (NM_006749, intron 2 of 10) 34053 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr20-4259 chr20 49381578 49381788 + 5.66 0.000 intron (NM_004975, intron 1 of 1) intron (NM_004975, intron 1 of 1) 100985 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr9-8366 chr9 117537626 117537836 + 5.66 0.000 Intergenic Intergenic -110875 NR_109806 101928797 Hs.382317 NR_109806 ENSG00000233569 LOC101928797 - uncharacterized LOC101928797 ncRNA chr9-8140 chr9 101723657 101723867 + 5.66 0.000 intron (NM_133445, intron 1 of 8) LTR12C|LTR|ERV1 14818 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr20-1864 chr20 35387434 35387644 + 5.66 0.000 intron (NM_018244, intron 2 of 9) Plat_L3|LINE|CR1 24434 NM_018244 55245 Hs.726290 NM_018244 ENSG00000101019 UQCC1 BFZB|C20orf44|CBP3|UQCC ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding chr11-10064 chr11 84534486 84534696 + 5.66 0.000 exon (NM_001364, exon 2 of 23) exon (NM_001364, exon 2 of 23) 186351 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr5-7945 chr5 79932480 79932690 + 5.66 0.000 Intergenic Intergenic -3994 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr14-2495 chr14 102095258 102095468 + 5.66 0.000 intron (NM_001017963, intron 2 of 11) intron (NM_001017963, intron 2 of 11) -8319 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr1-12874 chr1 108944775 108944985 + 5.66 0.000 intron (NM_001048210, intron 4 of 11) AluY|SINE|Alu 5568 NM_001278202 23155 Hs.658489 NM_015127 ENSG00000121940 CLCC1 MCLC chloride channel CLIC like 1 protein-coding chr11-9140 chr11 33987463 33987673 + 5.66 0.000 Intergenic AluSz6|SINE|Alu -64163 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr1-6851 chr1 108660961 108661171 + 5.66 0.000 promoter-TSS (NM_001102592) promoter-TSS (NM_001102592) 27 NM_001102592 113802 Hs.7962 NM_144584 ENSG00000162639 HENMT1 C1orf59|HEN1 HEN methyltransferase 1 protein-coding chr1-8717 chr1 229597355 229597565 + 5.66 0.000 intron (NM_014409, intron 4 of 4) intron (NM_014409, intron 4 of 4) 28587 NM_014409 27097 Hs.270621 NM_014409 ENSG00000135801 TAF5L PAF65B TATA-box binding protein associated factor 5 like protein-coding chr9-7514 chr9 33019604 33019814 + 5.66 0.000 intron (NM_001368996, intron 1 of 7) intron (NM_001368996, intron 1 of 7) 5411 NR_160926 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr3-9175 chr3 34103907 34104117 + 5.66 0.000 Intergenic Intergenic 305382 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr7-9351 chr7 129274971 129275181 + 5.66 0.000 intron (NM_001130720, intron 1 of 16) MLT1G|LTR|ERVL-MaLR 50046 NM_015328 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr1-13665 chr1 11425134 11425344 + 5.66 0.000 Intergenic AluSz|SINE|Alu -53916 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr2-11945 chr2 26011923 26012133 + 5.66 0.000 Intergenic L1MEc|LINE|L1 -22056 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr1-16124 chr1 204948963 204949173 + 5.66 0.000 intron (NM_001160332, intron 3 of 27) intron (NM_001160332, intron 3 of 27) 4842 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr19-3475 chr19 35484507 35484717 + 5.66 0.000 Intergenic L1ME3D|LINE|L1 5852 NM_001244847 388533 Hs.112457 NM_207392 ENSG00000188508 KRTDAP KDAP|UNQ467 keratinocyte differentiation associated protein protein-coding chr3-1637 chr3 97988827 97989037 + 5.66 0.000 intron (NM_001105580, intron 9 of 9) (GGT)n|Simple_repeat|Simple_repeat -16481 NM_001261829 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr17-7676 chr17 30716520 30716730 + 5.66 0.000 intron (NR_144394, intron 1 of 8) intron (NR_144394, intron 1 of 8) 7017 NR_144394 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr5-9178 chr5 178470462 178470672 + 5.66 0.000 intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) 119826 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr10-4809 chr10 9876229 9876439 + 5.66 0.000 Intergenic L1MEg|LINE|L1 -182388 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA chr20-3751 chr20 19214226 19214436 + 5.66 0.000 intron (NM_020689, intron 1 of 16) intron (NM_020689, intron 1 of 16) 1689 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr10-7141 chr10 101152675 101152885 + 5.66 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -11514 NR_130724 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr10-8943 chr10 117229635 117229845 + 5.66 0.000 Intergenic L1MC5|LINE|L1 -11374 NM_003054 6571 Hs.596992 NM_003054 ENSG00000165646 SLC18A2 PKDYS2|SVAT|SVMT|VAT2|VMAT2 solute carrier family 18 member A2 protein-coding chr4-8530 chr4 163566521 163566731 + 5.66 0.000 intron (NM_017923, intron 2 of 3) intron (NM_017923, intron 2 of 3) 46908 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr6-4746 chr6 69433365 69433575 + 5.66 0.000 Intergenic SVA_A|Retroposon|SVA 362996 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr2-6531 chr2 203441593 203441803 + 5.66 0.000 3' UTR (NM_001282925, exon 11 of 11) 3' UTR (NM_001282925, exon 11 of 11) 74814 NM_001282927 10152 Hs.471156 NM_005759 ENSG00000138443 ABI2 ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB abl interactor 2 protein-coding chr2-10891 chr2 67517193 67517403 + 5.66 0.000 Intergenic Intergenic 119965 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding chr19-5503 chr19 45532194 45532404 + 5.66 0.000 intron (NM_001017989, intron 1 of 1) MER77|LTR|ERVL 24820 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr4-2763 chr4 14626373 14626583 + 5.66 0.000 intron (NR_126435, intron 3 of 6) intron (NR_126435, intron 3 of 6) 261691 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr16-6951 chr16 85839591 85839801 + 5.66 0.000 Intergenic Intergenic 40001 NM_001318802 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr16-6143 chr16 20866168 20866378 + 5.66 0.000 intron (NM_173475, intron 1 of 2) intron (NM_173475, intron 1 of 2) -33609 NM_001369631 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr4-6386 chr4 112094426 112094636 + 5.66 0.000 Intergenic Intergenic -50923 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr4-7209 chr4 41965276 41965486 + 5.66 0.000 Intergenic Intergenic -16375 NM_001029955 285429 Hs.213307 NM_001029955 ENSG00000182308 DCAF4L1 WDR21B DDB1 and CUL4 associated factor 4 like 1 protein-coding chr11-6764 chr11 85360588 85360798 + 5.66 0.000 intron (NM_001142699, intron 3 of 27) intron (NM_001142699, intron 3 of 27) 266577 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr22-2681 chr22 37096599 37096809 + 5.66 0.000 exon (NM_001289000, exon 4 of 19) exon (NM_001289000, exon 4 of 19) 6949 NM_153609 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr2-10444 chr2 206778596 206778806 + 5.66 0.000 intron (NM_001136193, intron 7 of 11) MER1B|DNA|hAT-Charlie -4533 NR_036078 100423002 NR_036078 ENSG00000263468 MIR3130-2 MIR3130-4|mir-3130-2 microRNA 3130-2 ncRNA chr1-15314 chr1 118675415 118675625 + 5.66 0.000 Intergenic Intergenic 312823 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr2-11572 chr2 997275 997485 + 5.66 0.000 intron (NM_018968, intron 1 of 16) intron (NM_018968, intron 1 of 16) -45988 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr11-9191 chr11 36566892 36567102 + 5.66 0.000 Intergenic Intergenic -1016 NM_000448 5896 Hs.73958 NM_000448 ENSG00000166349 RAG1 RAG-1|RNF74 recombination activating 1 protein-coding chr13-3136 chr13 84900252 84900462 + 5.66 0.000 Intergenic Intergenic 116703 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr12-7071 chr12 42017322 42017532 + 5.66 0.000 Intergenic Intergenic 127447 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr3-7412 chr3 107241283 107241493 + 5.66 0.000 promoter-TSS (NR_028303) promoter-TSS (NR_028303) 696 NR_028302 344595 Hs.543039 NR_028301 ENSG00000243701 DUBR DUM|LINC00883|LINC0883 DPPA2 upstream binding RNA ncRNA chr1-10262 chr1 119755559 119755769 + 5.66 0.000 intron (NM_005518, intron 5 of 9) intron (NM_005518, intron 5 of 9) 13268 NM_001166107 3158 Hs.59889 NM_005518 ENSG00000134240 HMGCS2 - 3-hydroxy-3-methylglutaryl-CoA synthase 2 protein-coding chr11-6729 chr11 81772222 81772432 + 5.66 0.000 Intergenic Intergenic 118509 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr15-3869 chr15 91314851 91315061 + 5.66 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -148383 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chrX-3064 chrX 110944587 110944797 + 5.66 0.000 intron (NM_001128167, intron 1 of 14) intron (NM_001128167, intron 1 of 14) 295 NM_001324330 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr22-3813 chr22 30532562 30532772 + 5.66 0.000 exon (NM_001353441, exon 5 of 12) exon (NM_001353441, exon 5 of 12) 9987 NM_001353441 730005 Hs.505605 NM_001193336 ENSG00000214491 SEC14L6 - SEC14 like lipid binding 6 protein-coding chr12-6031 chr12 109616403 109616613 + 5.66 0.000 Intergenic Intergenic 42714 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr19-5074 chr19 51019413 51019623 + 5.66 0.000 intron (NM_001077500, intron 1 of 5) CpG-15022 191 NM_145888 5655 Hs.275464 NM_002776 ENSG00000129451 KLK10 NES1|PRSSL1 kallikrein related peptidase 10 protein-coding chr7-8268 chr7 37916993 37917203 + 5.66 0.000 promoter-TSS (NM_003014) promoter-TSS (NM_003014) -281 NM_003014 6424 Hs.658169 NM_003014 ENSG00000106483 SFRP4 FRP-4|FRPHE|FRZB-2|PYL|sFRP-4 secreted frizzled related protein 4 protein-coding chrX-3032 chrX 82678076 82678286 + 5.66 0.000 Intergenic AluSx1|SINE|Alu -830109 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chrX-5265 chrX 139053077 139053287 + 5.66 0.000 intron (NM_001139501, intron 2 of 7) L1PB1|LINE|L1 151841 NM_001139501 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr5-3695 chr5 2442074 2442284 + 5.66 0.000 Intergenic Intergenic -129978 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr5-6452 chr5 167301028 167301238 + 5.66 0.000 intron (NM_001122679, intron 2 of 29) HERVH-int|LTR|ERV1 -132732 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr12-7640 chr12 81758543 81758753 + 5.66 0.000 promoter-TSS (NM_001220476) promoter-TSS (NM_001220476) 7 NM_001220474 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr18-3265 chr18 50718768 50718978 + 5.66 0.000 intron (NM_001292040, intron 3 of 3) AluSx|SINE|Alu 101143 NM_031939 83876 Hs.30495 NM_031939 ENSG00000134042 MRO B29|C18orf3 maestro protein-coding chr5-9052 chr5 170164114 170164324 + 5.66 0.000 Intergenic Intergenic 34922 NR_108022 100507267 Hs.634846 NR_108022 LINC01187 CTB-27N1.1|KIDR long intergenic non-protein coding RNA 1187 ncRNA chr6-3706 chr6 168024326 168024536 + 5.66 0.000 intron (NM_005355, intron 1 of 7) (T)n|Simple_repeat|Simple_repeat 6558 NM_005355 3834 Hs.150013 NM_005355 ENSG00000125337 KIF25 KNSL3 kinesin family member 25 protein-coding chr3-10675 chr3 150536636 150536846 + 5.66 0.000 Intergenic AluJb|SINE|Alu 9755 NM_014445 27230 Hs.518326 NM_014445 ENSG00000120742 SERP1 RAMP4 stress associated endoplasmic reticulum protein 1 protein-coding chr7-5187 chr7 8785880 8786090 + 5.66 0.000 Intergenic Intergenic 352376 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr1-14608 chr1 54593179 54593389 + 5.66 0.000 intron (NM_015547, intron 4 of 16) AluJr4|SINE|Alu 30241 NM_176782 338094 Hs.234786 NM_176782 ENSG00000162391 FAM151A C1orf179 family with sequence similarity 151 member A protein-coding chr2-12784 chr2 86298261 86298471 + 5.66 0.000 intron (NM_001164730, intron 1 of 6) MIR3|SINE|MIR 39260 NM_001371279 chr6-4715 chr6 58320583 58320793 + 5.66 0.000 Intergenic L1PA7|LINE|L1 -359242 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr2-12171 chr2 39568436 39568646 + 5.66 0.000 intron (NR_037875, intron 5 of 5) intron (NR_037875, intron 5 of 5) -96957 NM_001167959 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr14-5031 chr14 79288541 79288751 + 5.66 0.000 intron (NM_001105250, intron 1 of 6) MIRb|SINE|MIR 9266 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr1-14694 chr1 62900691 62900901 + 5.66 0.000 Intergenic MER117|DNA|hAT-Charlie 110129 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr4-5382 chr4 189314961 189315171 + 5.66 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -344540 NR_121679 101928971 Hs.519164 NR_121679 ENSG00000250739 LINC01262 TCONS_l2_00021807 long intergenic non-protein coding RNA 1262 ncRNA chr4-7089 chr4 32455623 32455833 + 5.66 0.000 Intergenic LTR19-int|LTR|ERV1 104690 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr5-7138 chr5 1982381 1982591 + 5.66 0.000 Intergenic Intergenic 95155 NR_109912 101929081 Hs.519180 NR_109912 ENSG00000249326 CTD-2194D22.4 - uncharacterized LOC101929081 ncRNA chr8-6271 chr8 41688737 41688947 + 5.66 0.000 intron (NM_020475, intron 33 of 41) intron (NM_020475, intron 33 of 41) -23568 NM_020480 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chrX-3714 chrX 116174865 116175075 + 5.66 0.000 TTS (NM_000686) TTS (NM_000686) 4226 NM_000686 186 Hs.405348 NM_000686 ENSG00000180772 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor type 2 protein-coding chr5-8233 chr5 109892426 109892636 + 5.66 0.000 Intergenic Intergenic 9349 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr7-6498 chr7 11484819 11485029 + 5.66 0.000 intron (NM_015204, intron 6 of 26) AluSx4|SINE|Alu 347274 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr8-6924 chr8 102845031 102845241 + 5.66 0.000 intron (NM_001363010, intron 2 of 11) intron (NM_001363010, intron 2 of 11) 19027 NM_001301668 51582 Hs.459106 NM_015878 ENSG00000155096 AZIN1 AZI|AZI1|AZIA1|OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding chr18-3034 chr18 27356012 27356222 + 5.66 0.000 Intergenic Intergenic -13461 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr10-5195 chr10 60313710 60313920 + 5.66 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 76060 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr10-7533 chr10 14535435 14535645 + 5.66 0.000 intron (NM_031453, intron 2 of 4) intron (NM_031453, intron 2 of 4) -2826 NM_001320741 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr1-12262 chr1 225378780 225378990 + 5.66 0.000 intron (NM_001367479, intron 79 of 85) AluSg7|SINE|Alu 49153 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr3-6690 chr3 131901530 131901740 + 5.66 0.000 intron (NM_130808, intron 2 of 15) FLAM_C|SINE|Alu 84296 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr8-5831 chr8 5589889 5590099 + 5.66 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -595080 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chrX-2246 chrX 46594691 46594901 + 5.66 0.000 intron (NM_019886, intron 1 of 1) L1MD2|LINE|L1 21031 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chr2-13836 chr2 176524027 176524237 + 5.66 0.000 Intergenic Intergenic 76920 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr17-4968 chr17 79762291 79762501 + 5.66 0.000 Intergenic Intergenic -15752 NM_005189 84733 Hs.368410 NM_005189 ENSG00000173894 CBX2 CDCA6|M33|SRXY5 chromobox 2 protein-coding chr2-11254 chr2 173780342 173780552 + 5.66 0.000 Intergenic LTR16A|LTR|ERVL 183433 NM_001017371 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr6-7765 chr6 94655551 94655761 + 5.66 0.000 Intergenic L1M1|LINE|L1 921795 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr16-4592 chr16 67780544 67780754 + 5.66 0.000 intron (NM_001320238, intron 1 of 12) intron (NM_001320238, intron 1 of 12) 25911 NM_001320240 57610 Hs.368569 NM_020850 ENSG00000141084 RANBP10 - RAN binding protein 10 protein-coding chr2-13646 chr2 160649682 160649892 + 5.66 0.000 Intergenic MER52D|LTR|ERV1 -155980 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr11-4897 chr11 58040909 58041119 + 5.66 0.000 intron (NM_001005212, intron 1 of 2) intron (NM_001005212, intron 1 of 2) 10061 NM_001005186 219952 Hs.690432 NM_001005186 ENSG00000279051 OR6Q1 OR11-226 olfactory receptor family 6 subfamily Q member 1 (gene/pseudogene) protein-coding chr17-4380 chr17 20752386 20752596 + 5.66 0.000 Intergenic AluJb|SINE|Alu 40045 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chrX-2165 chrX 38362511 38362721 + 5.66 0.000 intron (NM_000531, intron 1 of 9) intron (NM_000531, intron 1 of 9) 10012 NM_000531 5009 Hs.117050 NM_000531 ENSG00000036473 OTC OCTD ornithine carbamoyltransferase protein-coding chr3-10467 chr3 133882566 133882776 + 5.66 0.000 intron (NM_016577, intron 1 of 7) intron (NM_016577, intron 1 of 7) 13176 NM_001363953 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr2-10467 chr2 217848179 217848389 + 5.66 0.000 exon (NM_022648, exon 17 of 33) exon (NM_022648, exon 17 of 33) -14551 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr7-7257 chr7 30224739 30224949 + 5.66 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -59753 NM_147128 223082 Hs.263912 NM_147128 ENSG00000180233 ZNRF2 RNF202 zinc and ring finger 2 protein-coding chr1-13123 chr1 197469232 197469442 + 5.66 0.000 intron (NR_047564, intron 11 of 11) intron (NR_047564, intron 11 of 11) 201085 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr9-7019 chr9 118355294 118355504 + 5.66 0.000 Intergenic L1PB4|LINE|L1 -324272 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr1-16048 chr1 201428170 201428380 + 5.66 0.000 Intergenic Intergenic -6545 NM_003281 7135 Hs.320890 NM_003281 ENSG00000159173 TNNI1 SSTNI|TNN1 troponin I1, slow skeletal type protein-coding chr14-4490 chr14 36656792 36657002 + 5.66 0.000 promoter-TSS (NM_006194) promoter-TSS (NM_006194) -671 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr19-5145 chr19 3387863 3388073 + 5.66 0.000 intron (NM_001245002, intron 2 of 10) CpG 21385 NM_005597 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr1-16575 chr1 235174055 235174265 + 5.66 0.000 intron (NR_135074, intron 23 of 24) AluSx3|SINE|Alu -12910 NR_144491 23029 Hs.535224 NM_015014 ENSG00000188739 RBM34 - RNA binding motif protein 34 protein-coding chr4-7522 chr4 75235838 75236048 + 5.66 0.000 Intergenic Intergenic -118133 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr13-3790 chr13 45296970 45297180 + 5.66 0.000 Intergenic Intergenic 39372 NR_145985 109616966 NR_145726 ENSG00000253051 SNORA31B - small nucleolar RNA, H/ACA box 31B snoRNA chr6-4223 chr6 4871645 4871855 + 5.66 0.000 intron (NM_001143970, intron 1 of 6) intron (NM_001143970, intron 1 of 6) -18290 NM_001143971 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr2-13746 chr2 169361280 169361490 + 5.66 0.000 intron (NM_004525, intron 1 of 78) (TC)n|Simple_repeat|Simple_repeat 1149 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr13-2938 chr13 31120554 31120764 + 5.66 0.000 Intergenic L1MB3|LINE|L1 41245 NM_006644 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr3-9663 chr3 62169974 62170184 + 5.66 0.000 intron (NM_002841, intron 8 of 29) intron (NM_002841, intron 8 of 29) 148868 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chrX-5136 chrX 130106440 130106650 + 5.66 0.000 intron (NM_001127197, intron 1 of 8) intron (NM_001127197, intron 1 of 8) 3955 NM_001421 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr10-7426 chr10 5619868 5620078 + 5.66 0.000 Intergenic Intergenic -23855 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr20-2892 chr20 63174083 63174293 + 5.66 0.000 Intergenic Intergenic -4312 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA chr8-6546 chr8 69111707 69111917 + 5.66 0.000 Intergenic Intergenic -7622 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chrX-2279 chrX 50347097 50347307 + 5.66 0.000 intron (NM_033670, intron 5 of 7) L1ME3B|LINE|L1 62660 NM_033670 85417 Hs.130310 NM_033031 ENSG00000147082 CCNB3 - cyclin B3 protein-coding chr5-7598 chr5 43155801 43156011 + 5.66 0.000 intron (NM_003432, intron 4 of 7) HERVL40-int|LTR|ERVL 34341 NM_001330714 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr13-4216 chr13 93851484 93851694 + 5.66 0.000 intron (NR_046536, intron 3 of 6) intron (NR_046536, intron 3 of 6) 6884 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr3-4628 chr3 15658646 15658856 + 5.66 0.000 intron (NM_001370752, intron 4 of 4) intron (NM_001370752, intron 4 of 4) 38620 NR_036085 100422990 NR_036085 ENSG00000264354 MIR3134 - microRNA 3134 ncRNA chr7-9599 chr7 148670436 148670646 + 5.66 0.000 Intergenic Intergenic -27215 NM_001370660 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr6-7876 chr6 107186193 107186403 + 5.66 0.000 intron (NM_020381, intron 7 of 7) intron (NM_020381, intron 7 of 7) -70783 NM_001367314 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr1-15947 chr1 189101181 189101391 + 5.66 0.000 Intergenic THE1D|LTR|ERVL-MaLR 1374724 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr2-11823 chr2 17946990 17947200 + 5.66 0.000 Intergenic L2b|LINE|L2 68428 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chrX-1681 chrX 5674977 5675187 + 5.66 0.000 Intergenic AluJr|SINE|Alu -551276 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr5-5653 chr5 157998261 157998471 + 5.66 0.000 Intergenic Intergenic -139221 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr12-7385 chr12 57173737 57173947 + 5.66 0.000 exon (NM_002332, exon 22 of 89) exon (NM_002332, exon 22 of 89) -20662 NR_031597 100302201 NR_031597 ENSG00000221365 MIR1228 MIRN1228|hsa-mir-1228|mir-1228 microRNA 1228 ncRNA chr19-6713 chr19 36917124 36917334 + 5.66 0.000 promoter-TSS (NM_001037232) promoter-TSS (NM_001037232) 897 NM_198539 374900 Hs.404220 NM_198539 ENSG00000198453 ZNF568 ZFP568 zinc finger protein 568 protein-coding chr7-6374 chr7 151173073 151173283 + 5.66 0.000 Intergenic Intergenic -5630 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr13-2002 chr13 32256507 32256717 + 5.66 0.000 intron (NM_023037, intron 51 of 60) intron (NM_023037, intron 51 of 60) 55342 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr5-9128 chr5 174837894 174838104 + 5.66 0.000 Intergenic Intergenic 86265 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr9-3516 chr9 33402410 33402620 + 5.66 0.000 promoter-TSS (NM_001170) promoter-TSS (NM_001170) 53 NM_001170 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr19-6499 chr19 17995990 17996200 + 5.66 0.000 intron (NM_002248, intron 10 of 10) AluJb|SINE|Alu -5029 NM_001025604 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr5-2097 chr5 14428839 14429049 + 5.66 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -35039 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr9-7497 chr9 31706092 31706302 + 5.66 0.000 Intergenic MLT2B3|LTR|ERVL -324707 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr11-9328 chr11 46176869 46177079 + 5.66 0.000 non-coding (NR_120565, exon 3 of 3) non-coding (NR_120565, exon 3 of 3) 5019 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chr11-8745 chr11 8398721 8398931 + 5.66 0.000 intron (NM_001352399, intron 11 of 11) L1PA4|LINE|L1 -130039 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr8-4289 chr8 96446690 96446900 + 5.66 0.000 Intergenic Intergenic -47018 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr10-4228 chr10 123963726 123963936 + 5.66 0.000 Intergenic Intergenic -72024 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr12-3969 chr12 13441759 13441969 + 5.66 0.000 Intergenic Intergenic -65119 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr6-2082 chr6 139319176 139319386 + 5.66 0.000 Intergenic FLAM_C|SINE|Alu -27283 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding chr12-7300 chr12 53761475 53761685 + 5.66 0.000 Intergenic Intergenic -4546 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr8-4285 chr8 96103959 96104169 + 5.66 0.000 Intergenic Intergenic 56742 NM_001001557 392255 Hs.492277 NM_001001557 ENSG00000156466 GDF6 BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|SGM1|SYNS4 growth differentiation factor 6 protein-coding chr12-7244 chr12 51544023 51544233 + 5.66 0.000 Intergenic MER11C|LTR|ERVK -47105 NM_001330260 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr1-12500 chr1 21218725 21218935 + 5.66 0.000 3' UTR (NM_001397, exon 19 of 19) 3' UTR (NM_001397, exon 19 of 19) -41933 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr7-9573 chr7 145852358 145852568 + 5.66 0.000 Intergenic L2c|LINE|L2 -921808 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr21-1518 chr21 44448670 44448880 + 5.66 0.000 Intergenic Intergenic 6509 NR_047476 100861510 Hs.505254 NR_047476 ENSG00000229356 LRRC3-DT LRRC3-AS1 LRRC3 divergent transcript ncRNA chrX-654 chrX 100723987 100724197 + 5.66 0.000 intron (NM_001370167, intron 2 of 19) SVA_D|Retroposon|SVA 7442 NM_001370169 94121 Hs.592224 NM_080737 ENSG00000102362 SYTL4 SLP4 synaptotagmin like 4 protein-coding chr17-4632 chr17 10631066 10631276 + 5.66 0.000 intron (NM_002470, intron 36 of 40) intron (NM_002470, intron 36 of 40) 26138 NM_002470 4621 Hs.440895 NM_002470 ENSG00000109063 MYH3 CPSKF1A|CPSKF1B|DA2A|DA2B|DA2B3|DA8|HEMHC|MYHC-EMB|MYHSE1|SMHCE myosin heavy chain 3 protein-coding chr4-6511 chr4 160957296 160957506 + 5.66 0.000 Intergenic L1MEc|LINE|L1 -1065332 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr3-9814 chr3 73979565 73979775 + 5.66 0.000 Intergenic Intergenic 170426 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr5-8412 chr5 127140793 127141003 + 5.66 0.000 Intergenic L1MDa|LINE|L1 -67406 NM_001164479 401207 Hs.49573 NM_001164478 ENSG00000164241 C5orf63 YDR286C chromosome 5 open reading frame 63 protein-coding chr1-13758 chr1 16462365 16462575 + 5.66 0.000 non-coding (NR_147210, exon 1 of 2) non-coding (NR_147210, exon 1 of 2) 663 NR_147211 107984921 Hs.528312 NR_147210 ENSG00000226029 LINC01772 - long intergenic non-protein coding RNA 1772 ncRNA chr15-2274 chr15 52714100 52714310 + 5.66 0.000 Intergenic AluY|SINE|Alu -35571 NR_104457 56204 Hs.152385 NM_019600 ENSG00000047346 FAM214A KIAA1370 family with sequence similarity 214 member A protein-coding chr10-9080 chr10 125265668 125265878 + 5.66 0.000 Intergenic Intergenic -104743 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chrX-4795 chrX 99542638 99542848 + 5.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 867530 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr7-9067 chr7 104330554 104330764 + 5.66 0.000 intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 2003 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr2-11205 chr2 159612634 159612844 + 5.66 0.000 intron (NM_001329857, intron 1 of 36) intron (NM_001329857, intron 1 of 36) -2555 NR_110587 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA chr4-5345 chr4 184023291 184023501 + 5.66 0.000 non-coding (NR_132761, exon 3 of 3) non-coding (NR_132761, exon 3 of 3) 118089 NM_020225 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chrX-3422 chrX 13913089 13913299 + 5.66 0.000 intron (NM_001318729, intron 1 of 6) AluJb|SINE|Alu 25444 NM_001001994 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr3-3800 chr3 14916025 14916235 + 5.66 0.000 intron (NM_152536, intron 11 of 19) intron (NM_152536, intron 11 of 19) 31375 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr21-1452 chr21 32025845 32026055 + 5.66 0.000 Intergenic MER44C|DNA|TcMar-Tigger 60345 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr8-6438 chr8 60464490 60464700 + 5.66 0.000 Intergenic MER112|DNA|hAT-Charlie -50777 NR_103854 100505532 Hs.720321 NR_103854 LINC01301 - long intergenic non-protein coding RNA 1301 ncRNA chrX-4376 chrX 50446152 50446362 + 5.66 0.000 intron (NM_001013742, intron 1 of 27) L1PREC2|LINE|L1 24568 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr5-5301 chr5 126395387 126395597 + 5.66 0.000 intron (NM_001146319, intron 1 of 13) intron (NM_001146319, intron 1 of 13) -27654 NM_001146320 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr8-3930 chr8 42427978 42428188 + 5.66 0.000 intron (NM_006749, intron 10 of 10) intron (NM_006749, intron 10 of 10) 36203 NM_005662 7419 Hs.699301 NM_005662 ENSG00000078668 VDAC3 HD-VDAC3|VDAC-3 voltage dependent anion channel 3 protein-coding chr1-14721 chr1 65090450 65090660 + 5.66 0.000 Intergenic MIRc|SINE|MIR -22809 NM_001321853 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chrX-4263 chrX 40617616 40617826 + 5.66 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -5845 NM_001195522 347411 Hs.128084 NM_001195522 ENSG00000238205 MPC1L SLC54A3 mitochondrial pyruvate carrier 1 like protein-coding chr14-5221 chr14 96770839 96771049 + 5.66 0.000 intron (NR_146552, intron 3 of 3) intron (NR_146552, intron 3 of 3) -26438 NM_003384 7443 Hs.422662 NM_003384 ENSG00000100749 VRK1 PCH1|PCH1A VRK serine/threonine kinase 1 protein-coding chr19-5291 chr19 725634 725844 + 5.66 0.000 intron (NM_002579, intron 1 of 8) intron (NM_002579, intron 1 of 8) 16804 NM_001040134 5064 Hs.631841 NM_002579 ENSG00000099864 PALM PALM1 paralemmin protein-coding chr12-6793 chr12 10225587 10225797 + 5.66 0.000 Intergenic LTR12C|LTR|ERV1 12815 NM_031412 23710 Hs.524250 NM_031412 ENSG00000139112 GABARAPL1 APG8-LIKE|APG8L|ATG8|ATG8B|ATG8L|GEC1 GABA type A receptor associated protein like 1 protein-coding chr3-8213 chr3 46829757 46829967 + 5.66 0.000 non-coding (NR_148409, exon 3 of 3) non-coding (NR_148409, exon 3 of 3) 3961 NR_148409 339906 Hs.585127 NM_182702 ENSG00000178055 PRSS42P PRSS42|TESSP2 serine protease 42, pseudogene pseudo chr20-3754 chr20 19318192 19318402 + 5.66 0.000 intron (NM_020689, intron 2 of 16) LTR16C|LTR|ERVL -33701 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr14-4487 chr14 36406265 36406475 + 5.66 0.000 Intergenic L2b|LINE|L2 -85694 NM_001144891 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr10-3396 chr10 29363341 29363551 + 5.66 0.000 Intergenic Harlequin-int|LTR|ERV1 -46088 NR_110926 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr10-3526 chr10 72926336 72926546 + 5.66 0.000 intron (NM_152635, intron 7 of 8) L2c|LINE|L2 28365 NM_001318124 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chr11-9086 chr11 31173880 31174090 + 5.66 0.000 intron (NM_001367979, intron 9 of 38) MER52A|LTR|ERV1 -181299 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr21-1552 chr21 9012317 9012527 + 5.66 0.000 Intergenic L1PA15-16|LINE|L1 24805 NR_162105 113218501 NR_162105 MIR10396A - microRNA 10396a ncRNA chr3-11079 chr3 184907090 184907300 + 5.66 0.000 intron (NM_001009921, intron 24 of 46) MER4A|LTR|ERV1 94688 NR_146116 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr10-6403 chr10 7320039 7320249 + 5.66 0.000 intron (NM_001029880, intron 4 of 20) intron (NM_001029880, intron 4 of 20) 89197 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr8-2713 chr8 98730611 98730821 + 5.66 0.000 intron (NM_006281, intron 4 of 10) AluSx|SINE|Alu 94955 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr4-6683 chr4 2895744 2895954 + 5.66 0.000 intron (NM_014190, intron 6 of 15) intron (NM_014190, intron 6 of 15) 38388 NM_001120 10227 Hs.632581 NM_001120 ENSG00000109736 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding chr12-3506 chr12 124854706 124854916 + 5.66 0.000 intron (NR_160424, intron 1 of 11) L2a|LINE|L2 9053 NR_160420 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr4-7274 chr4 48496208 48496418 + 5.66 0.000 Intergenic Intergenic 6061 NM_175619 326340 Hs.276457 NM_175619 ENSG00000182223 ZAR1 Z3CXXC6 zygote arrest 1 protein-coding chr3-6483 chr3 110932515 110932725 + 5.66 0.000 Intergenic Intergenic 137339 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr10-4115 chr10 70592894 70593104 + 5.66 0.000 Intergenic Intergenic 9742 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr1-16263 chr1 212214704 212214914 + 5.66 0.000 intron (NR_125982, intron 2 of 3) L1ME3Cz|LINE|L1 19927 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr3-10239 chr3 122996859 122997069 + 5.66 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) -3691 NM_001256346 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr7-7277 chr7 33815330 33815540 + 5.66 0.000 Intergenic Intergenic -89480 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr8-5643 chr8 108263980 108264190 + 5.66 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -15368 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr15-4012 chr15 57743698 57743908 + 5.66 0.000 Intergenic L2b|LINE|L2 37089 NM_015532 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr7-5378 chr7 31971286 31971496 + 5.66 0.000 intron (NM_001322059, intron 3 of 17) MIRb|SINE|MIR 99016 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr4-5849 chr4 112889238 112889448 + 5.66 0.000 intron (NM_001354271, intron 1 of 42) intron (NM_001354271, intron 1 of 42) 28356 NM_001354261 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr20-2563 chr20 36686977 36687187 + 5.66 0.000 intron (NR_038370, intron 3 of 13) AluJo|SINE|Alu -40886 NM_175077 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr13-2463 chr13 50152343 50152553 + 5.66 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) -19570 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr7-7516 chr7 103375555 103375765 + 5.66 0.000 intron (NR_135801, intron 17 of 17) FLAM_C|SINE|Alu 28017 NM_002803 5701 Hs.437366 NM_002803 ENSG00000161057 PSMC2 MSS1|Nbla10058|S7 proteasome 26S subunit, ATPase 2 protein-coding chr5-5741 chr5 170334893 170335103 + 5.66 0.000 non-coding (NR_026945, exon 3 of 3) non-coding (NR_026945, exon 3 of 3) 3605 NR_026945 257358 Hs.249689 NM_001025454 LINC01366 - long intergenic non-protein coding RNA 1366 ncRNA chr4-7872 chr4 104293051 104293261 + 5.66 0.000 Intergenic Intergenic -197809 NR_125926 101929468 Hs.480435 NR_125926 ENSG00000245384 CXXC4-AS1 - CXXC4 antisense RNA 1 ncRNA chr9-6105 chr9 137916677 137916887 + 5.66 0.000 intron (NM_001243812, intron 5 of 45) intron (NM_001243812, intron 5 of 45) -24212 NR_121583 100133077 Hs.640081 NR_121583 ENSG00000203987 LOC100133077 - uncharacterized LOC100133077 ncRNA chr9-7586 chr9 36326384 36326594 + 5.66 0.000 Intergenic AluSz|SINE|Alu -49433 NM_001190388 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding chr9-8332 chr9 115276973 115277183 + 5.66 0.000 intron (NR_163556, intron 2 of 7) L1MA3|LINE|L1 135260 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr1-10234 chr1 115863532 115863742 + 5.66 0.000 Intergenic L2c|LINE|L2 -22511 NM_005599 4808 Hs.46296 NM_005599 ENSG00000177551 NHLH2 HEN2|NSCL2|bHLHa34 nescient helix-loop-helix 2 protein-coding chr2-12546 chr2 67908538 67908748 + 5.66 0.000 Intergenic AluSx1|SINE|Alu -83081 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr14-5136 chr14 90363032 90363242 + 5.66 0.000 Intergenic Intergenic -31196 NM_017970 55051 Hs.528131 NM_017970 ENSG00000119720 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding chr8-4475 chr8 117337531 117337741 + 5.66 0.000 Intergenic Intergenic -183077 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr13-4399 chr13 109672240 109672450 + 5.66 0.000 Intergenic Intergenic -55929 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr16-3366 chr16 54373645 54373855 + 5.66 0.000 Intergenic Intergenic -3051 NR_134923 100996345 Hs.112680 NR_134922 ENSG00000261803 LINC02140 - long intergenic non-protein coding RNA 2140 ncRNA chr11-9021 chr11 25793840 25794050 + 5.66 0.000 Intergenic L1M2|LINE|L1 -395178 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr15-4619 chr15 61798120 61798330 + 5.66 0.000 Intergenic Intergenic 68307 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr7-5650 chr7 55500269 55500479 + 5.66 0.000 intron (NM_001321242, intron 2 of 4) MLT1E1A|LTR|ERVL-MaLR 26506 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr2-14646 chr2 235361518 235361728 + 5.66 0.000 Intergenic AluSx1|SINE|Alu -132420 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr10-8201 chr10 72028232 72028442 + 5.66 0.000 Intergenic FRAM|SINE|Alu 60214 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr19-6720 chr19 37876202 37876412 + 5.66 0.000 Intergenic L2a|LINE|L2 -21111 NR_040015 100631378 Hs.726940 NR_040015 ENSG00000225868 LOC100631378 - uncharacterized 100631378 ncRNA chr19-5136 chr19 2006049 2006259 + 5.66 0.000 intron (NM_017797, intron 1 of 8) MER3|DNA|hAT-Charlie 9560 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr4-6877 chr4 11756319 11756529 + 5.66 0.000 intron (NR_146995, intron 1 of 3) intron (NR_146995, intron 1 of 3) 13044 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr1-10283 chr1 149650130 149650340 + 5.66 0.000 intron (NR_111950, intron 2 of 8) LTR49-int|LTR|ERV1 43223 NR_111951 57234 Hs.456578 NR_046135 ENSG00000277147 LINC00869 FAM91A2 long intergenic non-protein coding RNA 869 ncRNA chr6-7330 chr6 45857266 45857476 + 5.66 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 80226 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr3-5203 chr3 74131647 74131857 + 5.66 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 322508 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr6-3638 chr6 131807678 131807888 + 5.66 0.000 promoter-TSS (NM_006208) promoter-TSS (NM_006208) -237 NM_006208 5167 Hs.527295 NM_006208 ENSG00000197594 ENPP1 ARHR2|COLED|M6S1|NPP1|NPPS|PC-1|PCA1|PDNP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding chr13-4350 chr13 103145408 103145618 + 5.66 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -79096 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr15-1798 chr15 89873168 89873378 + 5.66 0.000 intron (NM_001199058, intron 7 of 9) HAL1|LINE|L1 10757 NR_049807 100846993 NR_049807 ENSG00000264796 MIR5009 - microRNA 5009 ncRNA chr10-9012 chr10 122002430 122002640 + 5.66 0.000 intron (NM_206862, intron 1 of 22) L1MC4|LINE|L1 13372 NM_206862 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr3-3794 chr3 14492880 14493090 + 5.66 0.000 3' UTR (NM_001080423, exon 24 of 24) 3' UTR (NM_001080423, exon 24 of 24) 47357 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chr9-3924 chr9 135060965 135061175 + 5.66 0.000 Intergenic MIRb|SINE|MIR -14435 NM_006334 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr7-9562 chr7 141886464 141886674 + 5.66 0.000 Intergenic Intergenic -32307 NM_001001656 130075 Hs.690171 NM_001001656 ENSG00000258083 OR9A4 - olfactory receptor family 9 subfamily A member 4 protein-coding chr5-3750 chr5 50711410 50711620 + 5.66 0.000 intron (NM_024615, intron 2 of 25) MLT1L|LTR|ERVL-MaLR 44101 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chrX-5234 chrX 136557320 136557530 + 5.66 0.000 TTS (NM_016267) TTS (NM_016267) 6547 NR_030631 100126324 NR_030631 ENSG00000216060 MIR934 MIRN934|hsa-mir-934|mir-934 microRNA 934 ncRNA chr9-7767 chr9 77522545 77522755 + 5.66 0.000 intron (NR_121184, intron 4 of 4) MER5B|DNA|hAT-Charlie 75001 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr12-8138 chr12 120660590 120660800 + 5.66 0.000 intron (NM_001033677, intron 3 of 5) intron (NM_001033677, intron 3 of 5) 10418 NM_004276 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr1-4635 chr1 172359007 172359217 + 5.66 0.000 intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -61573 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr13-3761 chr13 43356686 43356896 + 5.66 0.000 intron (NM_001347966, intron 8 of 17) intron (NM_001347966, intron 8 of 17) -92061 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr4-8153 chr4 128839937 128840147 + 5.66 0.000 intron (NM_001287442, intron 2 of 10) intron (NM_001287442, intron 2 of 10) 28198 NM_001287443 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr10-8028 chr10 63231756 63231966 + 5.66 0.000 intron (NM_001322252, intron 2 of 24) AluSq2|SINE|Alu 37362 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr18-3420 chr18 63492801 63493011 + 5.66 0.000 intron (NM_002639, intron 4 of 6) intron (NM_002639, intron 4 of 6) 15948 NM_002639 5268 Hs.55279 NM_002639 ENSG00000206075 SERPINB5 PI5|maspin serpin family B member 5 protein-coding chr6-6124 chr6 159059600 159059810 + 5.66 0.000 Intergenic Intergenic -14553 NM_152133 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chr18-3242 chr18 48228069 48228279 + 5.66 0.000 intron (NM_001371285, intron 1 of 5) intron (NM_001371285, intron 1 of 5) -24127 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr3-10582 chr3 142348487 142348697 + 5.66 0.000 intron (NM_019001, intron 32 of 41) intron (NM_019001, intron 32 of 41) 99445 NM_019001 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr9-8370 chr9 117762362 117762572 + 5.66 0.000 Intergenic L2c|LINE|L2 58064 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr7-9464 chr7 134932876 134933086 + 5.66 0.000 intron (NM_033139, intron 2 of 12) intron (NM_033139, intron 2 of 12) 41523 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr13-4416 chr13 110352486 110352696 + 5.66 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) 11633 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr7-4197 chr7 131723352 131723562 + 5.66 0.000 Intergenic Intergenic -166829 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr1-11684 chr1 3788615 3788825 + 5.66 0.000 intron (NM_020710, intron 1 of 6) intron (NM_020710, intron 1 of 6) 7778 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 - leucine rich repeat containing 47 protein-coding chr2-5347 chr2 89763556 89763766 + 5.66 0.000 Intergenic Intergenic -125754 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr7-5872 chr7 92007147 92007357 + 5.66 0.000 intron (NM_147185, intron 8 of 49) intron (NM_147185, intron 8 of 49) 66377 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr11-5900 chr11 12884794 12885004 + 5.66 0.000 intron (NM_021961, intron 9 of 12) intron (NM_021961, intron 9 of 12) 104649 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr2-7189 chr2 211409871 211410081 + 5.66 0.000 intron (NM_005235, intron 25 of 27) intron (NM_005235, intron 25 of 27) 792405 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr7-7823 chr7 3370779 3370989 + 5.66 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 69632 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr18-3081 chr18 33504386 33504596 + 5.66 0.000 Intergenic MSTA|LTR|ERVL-MaLR -63451 NM_001371120 chr16-6466 chr16 57427104 57427314 + 5.66 0.000 TTS (NM_001308347) TTS (NM_001308347) 20176 NM_020313 57019 Hs.4900 NM_020313 ENSG00000005194 CIAPIN1 Anamorsin|CIAE2|DRE2|PRO0915 cytokine induced apoptosis inhibitor 1 protein-coding chr4-2656 chr4 187972114 187972324 + 5.66 0.000 Intergenic Intergenic -23552 NM_174900 132625 Hs.335787 NM_174900 ENSG00000179059 ZFP42 REX-1|REX1|ZNF754|zfp-42 ZFP42 zinc finger protein protein-coding chr2-7872 chr2 52648983 52649193 + 5.66 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 53527 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr6-7339 chr6 46199762 46199972 + 5.66 0.000 Intergenic Intergenic -28857 NM_001290073 59084 Hs.35198 NM_021572 ENSG00000112796 ENPP5 NPP-5|NPP5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 protein-coding chr4-8087 chr4 123651030 123651240 + 5.66 0.000 intron (NR_027105, intron 1 of 5) intron (NR_027105, intron 1 of 5) 1144 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr12-4918 chr12 67698819 67699029 + 5.66 0.000 Intergenic Intergenic 30551 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr16-5078 chr16 79207297 79207507 + 5.66 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 393335 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr1-12070 chr1 149904742 149904952 + 5.66 0.000 3' UTR (NM_001278719, exon 3 of 3) 3' UTR (NM_001278719, exon 3 of 3) 2144 NM_001278719 9900 Hs.516153 NM_014849 ENSG00000159164 SV2A SV2 synaptic vesicle glycoprotein 2A protein-coding chr18-1051 chr18 12094485 12094695 + 5.66 0.000 intron (NM_001277333, intron 1 of 13) intron (NM_001277333, intron 1 of 13) 747 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr18-3476 chr18 71100291 71100501 + 5.66 0.000 Intergenic MER67C|LTR|ERV1 -449442 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr11-8395 chr11 94549514 94549724 + 5.66 0.000 3' UTR (NM_002033, exon 1 of 1) 3' UTR (NM_002033, exon 1 of 1) 5768 NM_002033 2526 Hs.390420 NM_002033 ENSG00000196371 FUT4 CD15|ELFT|FCT3A|FUC-TIV|FUTIV|LeX|SSEA-1 fucosyltransferase 4 protein-coding chr3-11018 chr3 181346511 181346721 + 5.66 0.000 intron (NR_075091, intron 3 of 7) AluJr|SINE|Alu 95870 NR_125407 102724604 Hs.570524 NR_125407 ENSG00000241231 LOC102724604 - uncharacterized LOC102724604 ncRNA chr4-6754 chr4 6229754 6229964 + 5.66 0.000 intron (NR_037863, intron 3 of 3) intron (NR_037863, intron 3 of 3) 29126 NR_037863 285484 Hs.479068 NR_037863 LINC02495 - long intergenic non-protein coding RNA 2495 ncRNA chr2-9485 chr2 236022916 236023126 + 5.66 0.000 intron (NM_001037131, intron 13 of 17) intron (NM_001037131, intron 13 of 17) 145365 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr4-3647 chr4 21948544 21948754 + 5.66 0.000 5' UTR (NM_147182, exon 1 of 9) 5' UTR (NM_147182, exon 1 of 9) 102 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr14-3735 chr14 34780794 34781004 + 5.66 0.000 intron (NM_013448, intron 16 of 26) intron (NM_013448, intron 16 of 26) -66076 NR_028131 1073 Hs.180141 NM_021914 ENSG00000165410 CFL2 NEM7 cofilin 2 protein-coding chr5-9003 chr5 165097487 165097697 + 5.66 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 627313 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr7-5392 chr7 32951226 32951436 + 5.66 0.000 Intergenic AluJr4|SINE|Alu -6073 NM_001284341 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr8-7230 chr8 127486706 127486916 + 5.66 0.000 Intergenic L1MD2|LINE|L1 -4672 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA chr1-12766 chr1 73557357 73557567 + 5.66 0.000 Intergenic THE1C|LTR|ERVL-MaLR -117217 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA chr10-5063 chr10 43233503 43233713 + 5.66 0.000 intron (NM_145313, intron 1 of 12) L1ME3A|LINE|L1 -3869 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr16-2688 chr16 80346281 80346491 + 5.66 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -194348 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr6-6228 chr6 21332689 21332899 + 5.66 0.000 Intergenic Intergenic 179098 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr4-6153 chr4 34440210 34440420 + 5.66 0.000 Intergenic Intergenic -170568 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr4-3183 chr4 6090074 6090284 + 5.66 0.000 intron (NM_001306134, intron 2 of 11) AluSx|SINE|Alu -71633 NM_001364690 389197 Hs.479065 NM_207405 ENSG00000181215 C4orf50 - chromosome 4 open reading frame 50 protein-coding chr2-10090 chr2 53322424 53322634 + 5.66 0.000 Intergenic MER5A|DNA|hAT-Charlie -445254 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr3-8645 chr3 175010477 175010687 + 5.66 0.000 intron (NM_207015, intron 1 of 13) intron (NM_207015, intron 1 of 13) 104660 NR_046390 100862679 Hs.148810 NR_046390 ENSG00000230292 NAALADL2-AS3 - NAALADL2 antisense RNA 3 ncRNA chr16-4987 chr16 10359960 10360170 + 5.66 0.000 Intergenic L1ME1|LINE|L1 -25996 NR_045815 80063 Hs.513343 NM_024997 ENSG00000166669 ATF7IP2 MCAF2 activating transcription factor 7 interacting protein 2 protein-coding chr17-6852 chr17 19907285 19907495 + 5.66 0.000 intron (NM_007202, intron 14 of 14) L1MEc|LINE|L1 -39454 NM_014683 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr11-9183 chr11 36088700 36088910 + 5.66 0.000 intron (NM_001304264, intron 2 of 5) intron (NM_001304264, intron 2 of 5) -10904 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr8-5931 chr8 18942845 18943055 + 5.66 0.000 intron (NM_015310, intron 1 of 15) intron (NM_015310, intron 1 of 15) -55893 NM_001362819 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr2-10092 chr2 53847308 53847518 + 5.66 0.000 intron (NM_001164165, intron 1 of 9) AluJb|SINE|Alu 1792 NR_037453 100500850 NR_037453 ENSG00000265452 MIR3682 mir-3682 microRNA 3682 ncRNA chr17-3537 chr17 73588210 73588420 + 5.66 0.000 intron (NM_001144952, intron 1 of 44) AluSp|SINE|Alu 56130 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chr18-2920 chr18 12768676 12768886 + 5.66 0.000 Intergenic ERVL-E-int|LTR|ERVL -19359 NR_110763 100996324 Hs.333275 NR_110763 LINC01882 - long intergenic non-protein coding RNA 1882 ncRNA chr11-8068 chr11 31757189 31757399 + 5.66 0.000 intron (NM_001288726, intron 10 of 11) intron (NM_001288726, intron 10 of 11) 43367 NM_001368930 5080 Hs.270303 NM_000280 ENSG00000007372 PAX6 AN|AN2|ASGD5|D11S812E|FVH1|MGDA|WAGR paired box 6 protein-coding chr7-7931 chr7 8958827 8959037 + 5.66 0.000 Intergenic L1M5|LINE|L1 525323 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr13-4051 chr13 75102401 75102611 + 5.66 0.000 Intergenic Intergenic 137875 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr20-4207 chr20 46696794 46697004 + 5.66 0.000 Intergenic LTR16C|LTR|ERVL -7455 NM_033550 112858 Hs.440263 NM_033550 ENSG00000172315 TP53RK BUD32|C20orf64|GAMOS4|Nori-2|Nori-2p|PRPK|dJ101A2 TP53 regulating kinase protein-coding chr10-8339 chr10 79388834 79389044 + 5.66 0.000 intron (NM_153367, intron 3 of 3) MIRc|SINE|MIR 41470 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr4-3470 chr4 114711305 114711515 + 5.66 0.000 Intergenic L2|LINE|L2 54651 NR_030303 693162 NR_030303 ENSG00000207931 MIR577 MIRN577|hsa-mir-577|mir-577 microRNA 577 ncRNA chr8-6244 chr8 40010084 40010294 + 5.66 0.000 intron (NM_194294, intron 9 of 10) L2a|LINE|L2 75234 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr18-3288 chr18 53003082 53003292 + 5.66 0.000 intron (NM_005215, intron 5 of 28) intron (NM_005215, intron 5 of 28) -233914 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr12-3551 chr12 598087 598297 + 5.66 0.000 intron (NM_016533, intron 1 of 3) intron (NM_016533, intron 1 of 3) -11706 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr3-9817 chr3 74147562 74147772 + 5.66 0.000 Intergenic MIRb|SINE|MIR 338423 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr21-1320 chr21 9823607 9823817 + 5.66 0.000 Intergenic SST1|Satellite|centr -2651 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr3-7488 chr3 150470590 150470800 + 5.66 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 62397 NM_001303264 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr7-8835 chr7 86303773 86303983 + 5.66 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -340031 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chr2-6949 chr2 115163891 115164101 + 5.66 0.000 intron (NM_001321906, intron 2 of 26) intron (NM_001321906, intron 2 of 26) 1841 NM_001321909 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr1-5797 chr1 182789511 182789721 + 5.66 0.000 promoter-TSS (NM_001200051) promoter-TSS (NM_001200051) -157 NM_001200051 80896 Hs.496969 NM_030769 ENSG00000135838 NPL C112|C1orf13|NAL|NPL1 N-acetylneuraminate pyruvate lyase protein-coding chr4-6858 chr4 10000361 10000571 + 5.66 0.000 intron (NM_001001290, intron 3 of 12) MLT1L|LTR|ERVL-MaLR 21031 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr5-8429 chr5 128021407 128021617 + 5.66 0.000 TTS (NR_015360) TTS (NR_015360) 61663 NR_152811 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA chr21-1845 chr21 41682618 41682828 + 5.66 0.000 intron (NR_024367, intron 1 of 2) intron (NR_024367, intron 1 of 2) 3421 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr1-13788 chr1 18080455 18080665 + 5.66 0.000 Intergenic Intergenic 14903 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr10-5163 chr10 56465614 56465824 + 5.66 0.000 Intergenic L1P4e|LINE|L1 -104446 NM_001005413 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr3-8182 chr3 39307779 39307989 + 5.66 0.000 Intergenic L1P3|LINE|L1 -21825 NM_005201 1237 Hs.113222 NM_005201 ENSG00000179934 CCR8 CC-CKR-8|CCR-8|CDw198|CKRL1|CMKBR8|CMKBRL2|CY6|GPRCY6|TER1 C-C motif chemokine receptor 8 protein-coding chr2-9773 chr2 107118895 107119105 + 5.66 0.000 Intergenic AluJb|SINE|Alu 230525 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr4-5689 chr4 24682848 24683058 + 5.66 0.000 Intergenic MIRc|SINE|MIR -98399 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr16-6911 chr16 85037255 85037465 + 5.66 0.000 intron (NM_001286566, intron 1 of 11) intron (NM_001286566, intron 1 of 11) 9609 NM_014732 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding KV880766.1-1 KV880766.1 53747 53957 + 5.66 0.000 NA NA NA NA chr3-8935 chr3 13637776 13637986 + 5.66 0.000 exon (NM_001998, exon 17 of 17) exon (NM_001998, exon 17 of 17) -12840 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr19-6281 chr19 7951558 7951768 + 5.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -7997 NM_006351 10469 Hs.465784 NM_006351 ENSG00000104980 TIMM44 TIM44 translocase of inner mitochondrial membrane 44 protein-coding chr3-7956 chr3 165221350 165221560 + 5.66 0.000 intron (NR_125764, intron 1 of 5) L2c|LINE|L2 14495 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr4-8210 chr4 135358987 135359197 + 5.66 0.000 Intergenic Intergenic -235533 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr11-4664 chr11 57261267 57261477 + 5.66 0.000 Intergenic Intergenic -23919 NM_005161 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr1-15309 chr1 118403569 118403779 + 5.66 0.000 Intergenic Intergenic -218446 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr19-6636 chr19 32069699 32069909 + 5.66 0.000 Intergenic Intergenic 36112 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LINC01782 - long intergenic non-protein coding RNA 1782 ncRNA chr10-6207 chr10 36987768 36987978 + 5.66 0.000 Intergenic Intergenic -137984 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr12-6984 chr12 29741775 29741985 + 5.66 0.000 intron (NM_001367875, intron 5 of 19) intron (NM_001367875, intron 5 of 19) 42062 NM_001193451 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr20-4158 chr20 44249921 44250131 + 5.66 0.000 intron (NR_046353, intron 1 of 3) MIRb|SINE|MIR 2718 NM_024034 78997 Hs.517059 NM_024034 ENSG00000124194 GDAP1L1 dJ881L22.1|dJ995J12.1.1 ganglioside induced differentiation associated protein 1 like 1 protein-coding chr11-3337 chr11 117592299 117592509 + 5.66 0.000 intron (NM_020693, intron 3 of 32) (TG)n|Simple_repeat|Simple_repeat 204812 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr9-7375 chr9 17573651 17573861 + 5.66 0.000 Intergenic Intergenic -5310 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr3-9296 chr3 42823018 42823228 + 5.66 0.000 intron (NM_001296, intron 2 of 2) intron (NM_001296, intron 2 of 2) 13678 NM_001296 1238 Hs.146346 NM_001296 ENSG00000144648 ACKR2 CCBP2|CCR10|CCR9|CMKBR9|D6|hD6 atypical chemokine receptor 2 protein-coding chr2-12798 chr2 88095413 88095623 + 5.66 0.000 intron (NM_198274, intron 5 of 9) intron (NM_198274, intron 5 of 9) -12919 NR_039940 100616447 NR_039940 ENSG00000265003 MIR4780 - microRNA 4780 ncRNA chr7-7220 chr7 22103587 22103797 + 5.66 0.000 Intergenic Intergenic 90053 NM_001367601 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr6-8578 chr6 164919045 164919255 + 5.66 0.000 Intergenic L1M3e|LINE|L1 -97087 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr2-8157 chr2 84552864 84553074 + 5.66 0.000 exon (NM_001370, exon 10 of 77) exon (NM_001370, exon 10 of 77) 36514 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chr14-4960 chr14 74784981 74785191 + 5.66 0.000 intron (NM_019589, intron 4 of 20) Plat_L3|LINE|CR1 21770 NM_019589 56252 Hs.531111 NM_019589 ENSG00000119596 YLPM1 C14orf170|PPP1R169|ZAP113|ZAP3 YLP motif containing 1 protein-coding chr10-5128 chr10 50469355 50469565 + 5.66 0.000 intron (NM_147156, intron 3 of 10) intron (NM_147156, intron 3 of 10) 154496 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr2-7962 chr2 63347306 63347516 + 5.66 0.000 intron (NR_148704, intron 13 of 18) MER53|DNA|hAT 90596 NR_122106 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr7-7254 chr7 29196880 29197090 + 5.66 0.000 promoter-TSS (NM_001293072) promoter-TSS (NM_001293072) -756 NM_001293072 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr15-4217 chr15 26682357 26682567 + 5.66 0.000 intron (NM_001278631, intron 3 of 9) intron (NM_001278631, intron 3 of 9) 34303 NM_001191320 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr2-14547 chr2 230590330 230590540 + 5.66 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 110094 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr19-7102 chr19 57583820 57584030 + 5.66 0.000 promoter-TSS (NM_001321146) promoter-TSS (NM_001321146) -220 NM_001010879 284307 Hs.454830 NM_001010879 ENSG00000171649 ZIK1 ZNF762 zinc finger protein interacting with K protein 1 protein-coding chr20-3690 chr20 14278238 14278448 + 5.66 0.000 intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) 59269 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr7-4156 chr7 100184302 100184512 + 5.66 0.000 intron (NM_001282718, intron 4 of 31) intron (NM_001282718, intron 4 of 31) 6489 NM_001282718 10734 Hs.592283 NM_012447 ENSG00000066923 STAG3 - stromal antigen 3 protein-coding chr4-8082 chr4 123325647 123325857 + 5.66 0.000 Intergenic Intergenic -71043 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr3-5947 chr3 45441663 45441873 + 5.66 0.000 intron (NM_001368263, intron 5 of 20) intron (NM_001368263, intron 5 of 20) 53192 NM_015340 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr12-6011 chr12 105130353 105130563 + 5.66 0.000 intron (NM_001293640, intron 13 of 32) intron (NM_001293640, intron 13 of 32) 22727 NM_001293640 23325 Hs.12144 NM_015275 ENSG00000136051 WASHC4 KIAA1033|MRT43|SWIP WASH complex subunit 4 protein-coding chr8-5097 chr8 54349824 54350034 + 5.66 0.000 Intergenic AluJb|SINE|Alu 19243 NR_004385 26766 NR_004385 ENSG00000199212 RNU105C E1-5|E1-6 RNA, U105C small nucleolar snoRNA chr10-3886 chr10 51989421 51989631 + 5.66 0.000 intron (NM_001098512, intron 5 of 17) intron (NM_001098512, intron 5 of 17) -289931 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr17-4394 chr17 29556000 29556210 + 5.66 0.000 Intergenic Intergenic 10932 NM_198147 116236 Hs.106510 NM_198147 ENSG00000168792 ABHD15 - abhydrolase domain containing 15 protein-coding chr3-8876 chr3 10604767 10604977 + 5.66 0.000 intron (NM_001353564, intron 1 of 20) intron (NM_001353564, intron 1 of 20) 15089 NM_001353564 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chr16-6858 chr16 83150170 83150380 + 5.66 0.000 intron (NM_001220490, intron 3 of 12) intron (NM_001220490, intron 3 of 12) -159977 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr17-8098 chr17 56063996 56064206 + 5.66 0.000 Intergenic L1PA8A|LINE|L1 -89374 NM_001370326 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 - ankyrin repeat and fibronectin type III domain containing 1 protein-coding chr10-7100 chr10 95951068 95951278 + 5.66 0.000 intron (NM_001349008, intron 10 of 34) AluJb|SINE|Alu 43208 NM_001349008 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr2-13252 chr2 126963181 126963391 + 5.66 0.000 Intergenic L1PA8A|LINE|L1 64396 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr17-7335 chr17 5910999 5911209 + 5.66 0.000 intron (NR_040000, intron 3 of 3) intron (NR_040000, intron 3 of 3) 138870 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr16-4480 chr16 56861155 56861365 + 5.66 0.000 Intergenic MIR1_Amn|SINE|MIR 2742 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr6-6453 chr6 103018548 103018758 + 5.66 0.000 Intergenic L1PA8|LINE|L1 1619668 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr3-8782 chr3 5004527 5004737 + 5.66 0.000 Intergenic MIRb|SINE|MIR -24671 NR_125916 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr7-7475 chr7 95430941 95431151 + 5.66 0.000 intron (NM_000305, intron 1 of 8) intron (NM_000305, intron 1 of 8) 3982 NM_000305 5445 Hs.514420 NM_000305 ENSG00000105854 PON2 - paraoxonase 2 protein-coding chr7-7030 chr7 132577423 132577633 + 5.66 0.000 promoter-TSS (NM_020911) promoter-TSS (NM_020911) -964 NM_020911 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr5-6405 chr5 148969279 148969489 + 5.66 0.000 Intergenic Intergenic 93025 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr15-4603 chr15 60560965 60561175 + 5.66 0.000 intron (NM_134260, intron 1 of 11) intron (NM_134260, intron 1 of 11) 31456 NM_134262 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr11-7809 chr11 104841298 104841508 + 5.66 0.000 Intergenic L1MEc|LINE|L1 57267 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr10-3086 chr10 12378349 12378559 + 5.66 0.000 intron (NM_153498, intron 1 of 10) AluJr|SINE|Alu -10528 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr3-10540 chr3 139811321 139811531 + 5.66 0.000 Intergenic Intergenic -123759 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr7-6412 chr7 155767984 155768194 + 5.66 0.000 intron (NM_053043, intron 16 of 17) intron (NM_053043, intron 16 of 17) 40983 NR_132318 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr1-11629 chr1 240646557 240646767 + 5.66 0.000 Intergenic Intergenic -34507 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr13-3811 chr13 46371533 46371743 + 5.66 0.000 intron (NM_001286766, intron 1 of 12) intron (NM_001286766, intron 1 of 12) 15614 NM_001286764 80183 Hs.98117 NM_025113 ENSG00000102445 RUBCNL C13orf18|KIAA0226L|PACER rubicon like autophagy enhancer protein-coding chr8-4134 chr8 74288815 74289025 + 5.66 0.000 intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 32441 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr16-4132 chr16 3734836 3735046 + 5.66 0.000 intron (NM_004380, intron 28 of 30) intron (NM_004380, intron 28 of 30) -17417 NM_001272049 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr16-6416 chr16 55771404 55771614 + 5.66 0.000 intron (NR_003276, intron 4 of 5) L2a|LINE|L2 10910 NR_003276 51716 Hs.721645 NM_016280 ENSG00000228695 CES1P1 CES1A2|CES1A3|CES4|CESR|PCE-3 carboxylesterase 1 pseudogene 1 pseudo chr3-6777 chr3 142823018 142823228 + 5.66 0.000 intron (NM_013363, intron 7 of 8) intron (NM_013363, intron 7 of 8) 65960 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr19-6603 chr19 28749911 28750121 + 5.66 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -22322 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr12-2903 chr12 51510445 51510655 + 5.66 0.000 3' UTR (NM_001258401, exon 25 of 25) 3' UTR (NM_001258401, exon 25 of 25) -80683 NM_001330260 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr4-8168 chr4 129926843 129927053 + 5.66 0.000 intron (NR_151713, intron 13 of 16) intron (NR_151713, intron 13 of 16) 155329 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr5-7944 chr5 79860558 79860768 + 5.66 0.000 Intergenic AluSq|SINE|Alu -75916 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr9-8404 chr9 119888273 119888483 + 5.66 0.000 Intergenic Intergenic -46682 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr12-5674 chr12 96476756 96476966 + 5.66 0.000 Intergenic MER41D|LTR|ERV1 -12716 NM_001306084 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr22-3830 chr22 31380985 31381195 + 5.66 0.000 Intergenic L1PA12|LINE|L1 -18514 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chr13-3140 chr13 88158165 88158375 + 5.66 0.000 intron (NR_131919, intron 1 of 4) ERVL-B4-int|LTR|ERVL 15403 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr9-7631 chr9 38422980 38423190 + 5.66 0.000 intron (NM_001007563, intron 1 of 4) intron (NM_001007563, intron 1 of 4) 1369 NM_001007563 347252 Hs.349705 NM_001007563 ENSG00000137142 IGFBPL1 IGFBP-RP4|IGFBPRP4|bA113O24.1 insulin like growth factor binding protein like 1 protein-coding chr2-12330 chr2 47804963 47805173 + 5.66 0.000 intron (NM_001281493, intron 5 of 8) intron (NM_001281493, intron 5 of 8) 21113 NM_001281494 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr7-6378 chr7 151379036 151379246 + 5.66 0.000 TTS (NM_016118) TTS (NM_016118) -30020 NR_034013 100131176 Hs.659231 NR_034012 ENSG00000243836 WDR86-AS1 - WDR86 antisense RNA 1 ncRNA chr3-9328 chr3 45528263 45528473 + 5.66 0.000 intron (NM_001368263, intron 19 of 20) intron (NM_001368263, intron 19 of 20) -18823 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr5-8219 chr5 108608635 108608845 + 5.66 0.000 Intergenic MER4E1|LTR|ERV1 119521 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr1-12489 chr1 19826153 19826363 + 5.66 0.000 Intergenic L2|LINE|L2 -10975 NM_019062 54546 Hs.124835 NM_019062 ENSG00000178828 RNF186 - ring finger protein 186 protein-coding chr4-5355 chr4 184934499 184934709 + 5.66 0.000 Intergenic L1MD2|LINE|L1 3836 NR_039660 100616111 NR_039660 ENSG00000263458 MIR4455 - microRNA 4455 ncRNA chr5-8555 chr5 135882882 135883092 + 5.66 0.000 intron (NR_146141, intron 8 of 8) intron (NR_146141, intron 8 of 8) 12854 NM_000590 3578 Hs.960 NM_000590 ENSG00000145839 IL9 HP40|IL-9|P40 interleukin 9 protein-coding chr4-3236 chr4 59642233 59642443 + 5.66 0.000 Intergenic MLT2D|LTR|ERVL 628765 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr11-3439 chr11 64419173 64419383 + 5.66 0.000 Intergenic Intergenic -29779 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr3-5086 chr3 46448657 46448867 + 5.66 0.000 intron (NM_001321121, intron 9 of 16) intron (NM_001321121, intron 9 of 16) 14892 NM_001199149 4057 Hs.529517 NM_002343 ENSG00000012223 LTF GIG12|HEL110|HLF2|LF lactotransferrin protein-coding chr1-10461 chr1 161308136 161308346 + 5.66 0.000 intron (NM_001315491, intron 1 of 5) intron (NM_001315491, intron 1 of 5) 1727 NM_000530 4359 Hs.591486 NM_000530 ENSG00000158887 MPZ CHM|CHN2|CMT1|CMT1B|CMT2I|CMT2J|CMT4E|CMTDI3|CMTDID|DSS|HMSNIB|MPP|P0 myelin protein zero protein-coding chr10-7398 chr10 3580156 3580366 + 5.66 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) -77423 NR_155744 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr6-6605 chr6 146749568 146749778 + 5.66 0.000 intron (NM_024694, intron 26 of 35) MSTA|LTR|ERVL-MaLR 54151 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr10-4425 chr10 67692586 67692796 + 5.66 0.000 intron (NM_013266, intron 1 of 17) SVA_D|Retroposon|SVA 3504 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chrX-2742 chrX 127379751 127379961 + 5.66 0.000 Intergenic L1PA15|LINE|L1 560127 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr11-10627 chr11 125371534 125371744 + 5.66 0.000 intron (NM_022062, intron 5 of 12) intron (NM_022062, intron 5 of 12) -123575 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr7-8815 chr7 83601506 83601716 + 5.66 0.000 intron (NM_012431, intron 1 of 16) MLT1O|LTR|ERVL-MaLR 39820 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr2-7738 chr2 37264976 37265186 + 5.66 0.000 intron (NM_005813, intron 13 of 17) intron (NM_005813, intron 13 of 17) 33423 NM_001350025 55471 Hs.433466 NM_018607 ENSG00000003509 NDUFAF7 C2orf56|MidA|PRO1853 NADH:ubiquinone oxidoreductase complex assembly factor 7 protein-coding chr5-7647 chr5 52560477 52560687 + 5.66 0.000 Intergenic Intergenic -227334 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr6-6020 chr6 113458469 113458679 + 5.66 0.000 Intergenic Intergenic -25127 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr16-6684 chr16 69950131 69950341 + 5.66 0.000 promoter-TSS (NM_182619) promoter-TSS (NM_182619) -469 NM_001136214 348174 Hs.592064 NM_182619 ENSG00000157322 CLEC18A MRCL|MRCL1|MRLP2 C-type lectin domain family 18 member A protein-coding chr2-14288 chr2 216274361 216274571 + 5.66 0.000 intron (NM_020814, intron 3 of 3) intron (NM_020814, intron 3 of 3) 57577 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA chr1-16194 chr1 207464515 207464725 + 5.66 0.000 intron (NM_001006658, intron 1 of 19) intron (NM_001006658, intron 1 of 19) 10292 NM_001877 1380 Hs.445757 NM_001877 ENSG00000117322 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement C3d receptor 2 protein-coding chr14-3710 chr14 18657717 18657927 + 5.66 0.000 Intergenic Intergenic -24188 NR_046104 642426 Hs.578301 NR_046104 ENSG00000257504 LINC02297 - long intergenic non-protein coding RNA 2297 ncRNA chr18-3166 chr18 42821211 42821421 + 5.66 0.000 intron (NM_002930, intron 4 of 4) intron (NM_002930, intron 4 of 4) 294369 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr11-5811 chr11 6817851 6818061 + 5.66 0.000 Intergenic MER52A|LTR|ERV1 -22048 NM_003696 8590 Hs.652252 NM_003696 ENSG00000184933 OR6A2 I7|OR11-55|OR6A1|OR6A2P olfactory receptor family 6 subfamily A member 2 protein-coding chr9-8004 chr9 94056766 94056976 + 5.66 0.000 intron (NM_177995, intron 1 of 9) intron (NM_177995, intron 1 of 9) 26058 NM_177995 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding chr17-7548 chr17 18935303 18935513 + 5.66 0.000 Intergenic AluJb|SINE|Alu -15268 NM_001282417 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr17-5550 chr17 44307951 44308161 + 5.66 0.000 promoter-TSS (NM_001144826) promoter-TSS (NM_001144826) 375 NR_110802 101926996 Hs.666688 NR_110802 RUNDC3A-AS1 - RUNDC3A antisense RNA 1 ncRNA chr5-5155 chr5 108466626 108466836 + 5.66 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -84633 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr8-5042 chr8 23842746 23842956 + 5.66 0.000 3' UTR (NM_003155, exon 4 of 4) 3' UTR (NM_003155, exon 4 of 4) 11955 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr18-2639 chr18 41410396 41410606 + 5.66 0.000 Intergenic Intergenic 110176 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr1-14218 chr1 35532730 35532940 + 5.66 0.000 intron (NM_024874, intron 2 of 20) intron (NM_024874, intron 2 of 20) 24568 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr8-6310 chr8 43875581 43875791 + 5.66 0.000 Intergenic ALR/Alpha|Satellite|centr 583244 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr6-7748 chr6 91982290 91982500 + 5.66 0.000 Intergenic MIR|SINE|MIR -291967 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chrX-3368 chrX 146882838 146883048 + 5.66 0.000 Intergenic AluYa5|SINE|Alu -68199 NM_001244892 100133053 NM_001244892 ENSG00000235699 CXorf51B CXorf51A chromosome X open reading frame 51B protein-coding chr11-5929 chr11 15091523 15091733 + 5.66 0.000 Intergenic L1ME3Cz|LINE|L1 18035 NM_000728 797 Hs.534305 NM_000728 ENSG00000175868 CALCB CALC2|CGRP-II|CGRP2 calcitonin related polypeptide beta protein-coding chr12-4996 chr12 79090675 79090885 + 5.66 0.000 intron (NM_005639, intron 3 of 10) LTR49|LTR|ERV1 45088 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr22-3470 chr22 43360586 43360796 + 5.66 0.000 Intergenic MER103C|DNA|hAT-Charlie -17319 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr2-9198 chr2 216582169 216582379 + 5.66 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 24664 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr17-5098 chr17 4816625 4816835 + 5.66 0.000 exon (NM_001243108, exon 15 of 25) exon (NM_001243108, exon 15 of 25) 9578 NM_002663 5338 Hs.104519 NM_002663 ENSG00000129219 PLD2 PLD1C phospholipase D2 protein-coding chr5-6141 chr5 35696970 35697180 + 5.66 0.000 intron (NM_024867, intron 14 of 36) L2a|LINE|L2 79212 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr13-3832 chr13 48344449 48344659 + 5.66 0.000 intron (NM_000321, intron 3 of 26) intron (NM_000321, intron 3 of 26) 40807 NM_000321 5925 Hs.408528 NM_000321 ENSG00000139687 RB1 OSRC|PPP1R130|RB|p105-Rb|pRb|pp110 RB transcriptional corepressor 1 protein-coding chr3-6544 chr3 119500773 119500983 + 5.66 0.000 intron (NM_016589, intron 2 of 6) intron (NM_016589, intron 2 of 6) 2331 NM_016589 51300 Hs.477287 NM_016589 ENSG00000113845 TIMMDC1 C3orf1|MC1DN31 translocase of inner mitochondrial membrane domain containing 1 protein-coding chr7-7680 chr7 153026439 153026649 + 5.66 0.000 Intergenic Intergenic 266792 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr1-15830 chr1 179456854 179457064 + 5.66 0.000 intron (NM_144696, intron 16 of 25) intron (NM_144696, intron 16 of 25) 90915 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr15-2615 chr15 65632631 65632841 + 5.66 0.000 intron (NM_001301033, intron 4 of 11) L2c|LINE|L2 8781 NM_001301032 9187 Hs.173092 NM_004727 ENSG00000074621 SLC24A1 CSNB1D|HsT17412|NCKX|NCKX1|RODX solute carrier family 24 member 1 protein-coding chr15-4540 chr15 56120939 56121149 + 5.66 0.000 intron (NM_001370561, intron 7 of 11) L1MA3|LINE|L1 68888 NM_001368074 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr22-3159 chr22 27643383 27643593 + 5.66 0.000 Intergenic Intergenic 158268 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr1-11716 chr1 9820276 9820486 + 5.66 0.000 intron (NM_001009566, intron 1 of 18) AluSz|SINE|Alu 4145 NM_014944 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr22-2509 chr22 23110385 23110595 + 5.66 0.000 intron (NM_002073, intron 2 of 2) intron (NM_002073, intron 2 of 2) 31500 NM_014433 27156 Hs.526920 NM_014433 ENSG00000100218 RSPH14 RTDR1 radial spoke head 14 homolog protein-coding chr18-2480 chr18 47985403 47985613 + 5.66 0.000 Intergenic Intergenic -54362 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr5-4044 chr5 40829207 40829417 + 5.66 0.000 3' UTR (NM_000997, exon 4 of 4) 3' UTR (NM_000997, exon 4 of 4) 3423 NR_002583 619564 NR_002583 ENSG00000212296 SNORD72 HBII-240 small nucleolar RNA, C/D box 72 snoRNA chr17-6800 chr17 6433614 6433824 + 5.66 0.000 intron (NM_001033055, intron 1 of 4) intron (NM_001033055, intron 1 of 4) 1402 NM_001285399 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr4-8519 chr4 162783123 162783333 + 5.66 0.000 Intergenic LTR33|LTR|ERVL 310400 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr17-6496 chr17 28871028 28871238 + 5.66 0.000 Intergenic Intergenic -9403 NR_039885 100616385 NR_039885 ENSG00000284085 MIR4732 mir-4732 microRNA 4732 ncRNA chr10-8350 chr10 80084819 80085029 + 5.66 0.000 intron (NM_001270368, intron 3 of 3) AluSc|SINE|Alu 5679 NR_072986 80195 Hs.169982 NM_025125 ENSG00000133678 TMEM254 C10orf57|bA369J21.6 transmembrane protein 254 protein-coding chr2-6977 chr2 131390550 131390760 + 5.66 0.000 Intergenic Intergenic -12246 NR_036499 389043 Hs.586791 NR_036499 LINC01120 - long intergenic non-protein coding RNA 1120 ncRNA chr7-6468 chr7 2891058 2891268 + 5.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -46855 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr4-6506 chr4 158799249 158799459 + 5.66 0.000 intron (NM_001346043, intron 1 of 15) intron (NM_001346043, intron 1 of 15) -6485 NM_001366843 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr16-4454 chr16 55230350 55230560 + 5.66 0.000 Intergenic L1ME4a|LINE|L1 -94104 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr13-2790 chr13 101076260 101076470 + 5.66 0.000 intron (NM_001350749, intron 34 of 43) intron (NM_001350749, intron 34 of 43) -132001 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr13-2308 chr13 32168145 32168355 + 5.66 0.000 intron (NM_023037, intron 17 of 60) MLT2B4|LTR|ERVL 136476 NM_023037 10129 Hs.507669 NM_023037 ENSG00000073910 FRY 13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1 FRY microtubule binding protein protein-coding chr12-5339 chr12 115937081 115937291 + 5.66 0.000 Intergenic L1MC1|LINE|L1 211468 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr14-2762 chr14 104042221 104042431 + 5.66 0.000 intron (NM_153046, intron 34 of 35) intron (NM_153046, intron 34 of 35) -43374 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr9-7383 chr9 18255207 18255417 + 5.66 0.000 Intergenic Intergenic -218841 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr19-5665 chr19 7752083 7752293 + 5.66 0.000 Intergenic AluY|SINE|Alu -4654 NM_021155 30835 Hs.278694 NM_021155 ENSG00000090659 CD209 CDSIGN|CLEC4L|DC-SIGN|DC-SIGN1 CD209 molecule protein-coding chr12-8049 chr12 115370574 115370784 + 5.66 0.000 Intergenic Intergenic -686504 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr6-6447 chr6 100710449 100710659 + 5.66 0.000 intron (NM_006828, intron 13 of 41) intron (NM_006828, intron 13 of 41) 170775 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr4-8027 chr4 118777039 118777249 + 5.66 0.000 intron (NM_014822, intron 8 of 22) L1PA6|LINE|L1 58982 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr8-5281 chr8 139925910 139926120 + 5.66 0.000 intron (NM_001160372, intron 19 of 22) MER63A|DNA|hAT-Blackjack 174520 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr2-13327 chr2 132824993 132825203 + 5.66 0.000 intron (NM_207481, intron 11 of 17) intron (NM_207481, intron 11 of 17) -90459 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr4-4852 chr4 111002050 111002260 + 5.66 0.000 Intergenic Intergenic -141508 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr3-4580 chr3 183430286 183430496 + 5.66 0.000 Intergenic Intergenic -2122 NM_015078 23101 Hs.208267 NM_015078 ENSG00000053524 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding chr3-9635 chr3 59773317 59773527 + 5.66 0.000 intron (NM_001354590, intron 7 of 8) intron (NM_001354590, intron 7 of 8) -114925 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr5-3134 chr5 59079931 59080141 + 5.66 0.000 intron (NM_006203, intron 5 of 14) intron (NM_006203, intron 5 of 14) -40560 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-11672 chr2 7374371 7374581 + 5.66 0.000 Intergenic Intergenic -46785 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr5-9018 chr5 166818445 166818655 + 5.66 0.000 Intergenic Intergenic 107820 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr20-3814 chr20 23603798 23604008 + 5.66 0.000 intron (NM_001008693, intron 1 of 1) intron (NM_001008693, intron 1 of 1) 2070 NM_001008693 128822 Hs.698020 NM_001008693 ENSG00000173335 CST9 CLM|CTES7A cystatin 9 protein-coding chr8-5892 chr8 16489640 16489850 + 5.66 0.000 Intergenic L2a|LINE|L2 -296954 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr6-7365 chr6 48388164 48388374 + 5.66 0.000 Intergenic L1PBa|LINE|L1 -319580 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr7-7707 chr7 158996514 158996724 + 5.66 0.000 Intergenic Intergenic -11735 NR_024394 154822 Hs.544783 NM_198345 ENSG00000231419 LINC00689 - long intergenic non-protein coding RNA 689 ncRNA chr4-4632 chr4 80507991 80508201 + 5.66 0.000 intron (NM_152770, intron 2 of 5) intron (NM_152770, intron 2 of 5) 172376 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr7-2381 chr7 38631318 38631528 + 5.66 0.000 promoter-TSS (NM_001635) promoter-TSS (NM_001635) -50 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr2-7456 chr2 14096780 14096990 + 5.66 0.000 Intergenic (TTA)n|Simple_repeat|Simple_repeat 304073 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr3-11000 chr3 179789967 179790177 + 5.66 0.000 TTS (NM_003940) TTS (NM_003940) -108122 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr2-11615 chr2 3529739 3529949 + 5.66 0.000 Intergenic Intergenic -10313 NM_018269 55256 Hs.502773 NM_018269 ENSG00000182551 ADI1 APL1|ARD|Fe-ARD|HMFT1638|MTCBP1|Ni-ARD|SIPL|mtnD acireductone dioxygenase 1 protein-coding chr1-12108 chr1 159959068 159959278 + 5.66 0.000 Intergenic LTR78|LTR|ERV1 -2051 NR_038849 100505633 Hs.445045 NR_038849 ENSG00000224259 LINC01133 - long intergenic non-protein coding RNA 1133 ncRNA chr13-4369 chr13 107370072 107370282 + 5.66 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) -49214 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chrX-4329 chrX 45891298 45891508 + 5.66 0.000 Intergenic Intergenic -39913 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr3-9467 chr3 50098496 50098706 + 5.66 0.000 intron (NM_005778, intron 4 of 24) AluSc8|SINE|Alu 2387 NR_045388 100775107 Hs.439480 NR_045388 ENSG00000281691 RBM5-AS1 LUST RBM5 antisense RNA 1 ncRNA chr2-10842 chr2 58522214 58522424 + 5.66 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 1566 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr7-9309 chr7 128130155 128130365 + 5.66 0.000 Intergenic L2|LINE|L2 48399 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr9-8588 chr9 128024748 128024958 + 5.66 0.000 Intergenic AluSx1|SINE|Alu 42467 NM_197956 203245 Hs.373606 NM_197956 ENSG00000171169 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding chr1-12715 chr1 54632646 54632856 + 5.66 0.000 intron (NM_015547, intron 16 of 16) HERVK9-int|LTR|ERVK -8989 NR_026782 374977 Hs.412482 NM_198547 ENSG00000184313 MROH7 C1orf175|HEATR8 maestro heat like repeat family member 7 protein-coding chr7-9586 chr7 147574606 147574816 + 5.66 0.000 intron (NM_014141, intron 11 of 22) HAL1|LINE|L1 -96968 NR_133929 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr20-3951 chr20 33986118 33986328 + 5.66 0.000 Intergenic MER66A|LTR|ERV1 -7688 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chrX-5064 chrX 124194017 124194227 + 5.66 0.000 Intergenic Intergenic -138538 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr2-7978 chr2 64938967 64939177 + 5.66 0.000 Intergenic L2a|LINE|L2 -6625 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr6-8319 chr6 145196139 145196349 + 5.66 0.000 Intergenic MER34C|LTR|ERV1 490633 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr5-5745 chr5 171120125 171120335 + 5.66 0.000 intron (NM_022897, intron 14 of 27) L1MA5A|LINE|L1 -189018 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr12-4673 chr12 47753367 47753577 + 5.66 0.000 intron (NM_001098532, intron 1 of 26) intron (NM_001098532, intron 1 of 26) 4926 NM_001098532 10411 Hs.8578 NM_006105 ENSG00000079337 RAPGEF3 CAMP-GEFI|EPAC|EPAC1|HSU79275|bcm910 Rap guanine nucleotide exchange factor 3 protein-coding chr1-13141 chr1 201443342 201443552 + 5.66 0.000 Intergenic Intergenic -21717 NM_003281 7135 Hs.320890 NM_003281 ENSG00000159173 TNNI1 SSTNI|TNN1 troponin I1, slow skeletal type protein-coding chr12-8247 chr12 124573537 124573747 + 5.66 0.000 Intergenic Intergenic -6030 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr8-3775 chr8 24984453 24984663 + 5.66 0.000 Intergenic Intergenic -27689 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chrX-4323 chrX 45367956 45368166 + 5.66 0.000 Intergenic MSTA|LTR|ERVL-MaLR -137327 NR_104644 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA chr20-4032 chr20 36891891 36892101 + 5.66 0.000 TTS (NM_001363733) TTS (NM_001363733) 15858 NM_080628 140711 Hs.472630 NM_080628 ENSG00000101342 TLDC2 C20orf118 TBC/LysM-associated domain containing 2 protein-coding chr11-10422 chr11 115638828 115639038 + 5.66 0.000 Intergenic Intergenic 95829 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr2-12894 chr2 98869790 98870000 + 5.66 0.000 intron (NM_207362, intron 1 of 9) intron (NM_207362, intron 1 of 9) 66330 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr4-8743 chr4 185783466 185783676 + 5.66 0.000 intron (NM_021069, intron 1 of 20) intron (NM_021069, intron 1 of 20) -7717 NM_001145673 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding KI270724.1-2 KI270724.1 1160 1370 + 5.66 0.000 NA NA NA NA chr11-9354 chr11 47150327 47150537 + 5.66 0.000 intron (NM_001003677, intron 4 of 8) L2a|LINE|L2 26447 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr1-15940 chr1 188023222 188023432 + 5.66 0.000 Intergenic L2c|LINE|L2 579699 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr1-12103 chr1 157790349 157790559 + 5.66 0.000 Intergenic L1MA7|LINE|L1 -13322 NM_001159488 79368 Hs.437393 NM_030764 ENSG00000132704 FCRL2 CD307b|FCRH2|IFGP4|IRTA4|SPAP1|SPAP1A|SPAP1B|SPAP1C Fc receptor like 2 protein-coding chr5-7534 chr5 37842883 37843093 + 5.66 0.000 intron (NR_103441, intron 1 of 3) AluSx1|SINE|Alu 2550 NR_103441 100861519 Hs.536820 NM_001278094 GDNF-AS1 GDNFOS GDNF antisense RNA 1 ncRNA chr1-14821 chr1 74118508 74118718 + 5.66 0.000 intron (NM_001105659, intron 4 of 7) L1ME3G|LINE|L1 79563 NM_001322315 127255 Hs.644625 NM_145258 ENSG00000162620 LRRIQ3 LRRC44 leucine rich repeats and IQ motif containing 3 protein-coding chr11-10231 chr11 99404902 99405112 + 5.66 0.000 intron (NM_001243271, intron 2 of 20) L1MA4A|LINE|L1 -151138 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr5-7032 chr5 160804473 160804683 + 5.66 0.000 intron (NM_001366652, intron 1 of 24) MIRb|SINE|MIR 47633 NM_001366653 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chrX-5391 chrX 151558358 151558568 + 5.66 0.000 Intergenic HERV9NC-int|LTR|ERV1 -5212 NM_173493 139135 Hs.160594 NM_173493 ENSG00000166049 PASD1 CT63|CT64|OXTES1 PAS domain containing repressor 1 protein-coding chr7-7981 chr7 15086200 15086410 + 5.66 0.000 Intergenic Intergenic -111447 NM_001350717 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr12-6261 chr12 43429731 43429941 + 5.66 0.000 intron (NM_025003, intron 23 of 38) intron (NM_025003, intron 23 of 38) 122367 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr11-7252 chr11 13782816 13783026 + 5.66 0.000 Intergenic Intergenic -1465 NR_149108 105376562 Hs.577257 NR_149108 ENSG00000255411 LINC02548 - long intergenic non-protein coding RNA 2548 ncRNA chr13-3805 chr13 46085609 46085819 + 5.66 0.000 intron (NM_001872, intron 2 of 10) LTR16B|LTR|ERVL 19319 NM_001872 1361 Hs.512937 NM_001872 ENSG00000080618 CPB2 CPU|PCPB|TAFI carboxypeptidase B2 protein-coding chr12-2399 chr12 41033744 41033954 + 5.66 0.000 intron (NM_001843, intron 23 of 23) AluY|SINE|Alu 125492 NM_175038 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr16-3649 chr16 87525312 87525522 + 5.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 31230 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr2-13757 chr2 170396325 170396535 + 5.66 0.000 intron (NM_001083615, intron 16 of 33) intron (NM_001083615, intron 16 of 33) -45487 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr14-4758 chr14 62441819 62442029 + 5.66 0.000 Intergenic L1M2a|LINE|L1 -301951 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr1-7779 chr1 43549066 43549276 + 5.66 0.000 intron (NM_001329137, intron 4 of 34) intron (NM_001329137, intron 4 of 34) 18288 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr6-6785 chr6 4042393 4042603 + 5.66 0.000 exon (NM_003913, exon 5 of 15) exon (NM_003913, exon 5 of 15) 21198 NM_003913 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr9-5080 chr9 34347010 34347220 + 5.66 0.000 Intergenic Intergenic 17546 NM_147173 318 Hs.493767 NM_001161 ENSG00000164978 NUDT2 APAH1 nudix hydrolase 2 protein-coding chr10-7857 chr10 47183350 47183560 + 5.66 0.000 Intergenic Intergenic -116742 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr1-16439 chr1 226793776 226793986 + 5.66 0.000 Intergenic Intergenic -54706 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr7-4580 chr7 11077881 11078091 + 5.66 0.000 intron (NR_033436, intron 15 of 16) intron (NR_033436, intron 15 of 16) 104114 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr14-1695 chr14 100203933 100204143 + 5.66 0.000 Intergenic AluSz6|SINE|Alu -35106 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr20-4160 chr20 44358580 44358790 + 5.66 0.000 intron (NM_175914, intron 1 of 9) intron (NM_175914, intron 1 of 9) 2884 NM_175914 3172 Hs.116462 NM_000457 ENSG00000101076 HNF4A FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14 hepatocyte nuclear factor 4 alpha protein-coding chr7-4083 chr7 23986120 23986330 + 5.66 0.000 Intergenic AluY|SINE|Alu 276006 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr12-7490 chr12 66862735 66862945 + 5.66 0.000 Intergenic Intergenic -58571 NM_001366724 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr1-11996 chr1 92096443 92096653 + 5.66 0.000 intron (NM_183242, intron 2 of 8) AluJo|SINE|Alu 16203 NM_183242 284697 Hs.676102 NM_183242 ENSG00000189195 BTBD8 - BTB domain containing 8 protein-coding chr6-4470 chr6 35829118 35829328 + 5.66 0.000 Intergenic Intergenic 23871 NM_182548 222662 Hs.367947 NM_182548 ENSG00000197753 LHFPL5 DFNB67|TMHS|dJ510O8.8 LHFPL tetraspan subfamily member 5 protein-coding chr2-7152 chr2 199513946 199514156 + 5.66 0.000 Intergenic AluJr|SINE|Alu -42785 NM_015265 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr12-7077 chr12 42809244 42809454 + 5.66 0.000 Intergenic Intergenic 117133 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr1-14121 chr1 31493938 31494148 + 5.66 0.000 Intergenic Intergenic -6042 NR_034112 149086 Hs.729905 NR_034112 ENSG00000260386 LDC1P LINC01225 leucine decarboxylase 1, pseudogene pseudo chr14-3507 chr14 103100189 103100399 + 5.66 0.000 exon (NM_001077594, exon 1 of 11) exon (NM_001077594, exon 1 of 11) 150 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3 like 4 protein-coding chr5-4930 chr5 74416236 74416446 + 5.66 0.000 intron (NR_126354, intron 2 of 2) intron (NR_126354, intron 2 of 2) 93855 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chrX-5137 chrX 130154621 130154831 + 5.66 0.000 intron (NR_132647, intron 1 of 15) intron (NR_132647, intron 1 of 15) 11115 NM_004208 9131 Hs.424932 NM_004208 ENSG00000156709 AIFM1 AIF|CMT2D|CMTX4|COWCK|COXPD6|DFNX5|NADMR|NAMSD|PDCD8 apoptosis inducing factor mitochondria associated 1 protein-coding chr16-5377 chr16 87424209 87424419 + 5.66 0.000 intron (NM_015144, intron 3 of 12) intron (NM_015144, intron 3 of 12) 31978 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr17-7424 chr17 10296042 10296252 + 5.66 0.000 Intergenic MIRc|SINE|MIR 76859 NM_003802 8735 Hs.711142 NM_003802 ENSG00000006788 MYH13 MyHC-IIL|MyHC-eo myosin heavy chain 13 protein-coding chr2-13083 chr2 111248683 111248893 + 5.66 0.000 intron (NR_136165, intron 2 of 3) intron (NR_136165, intron 2 of 3) 72298 NR_039636 100616341 NR_039636 ENSG00000266139 MIR4435-2 mir-4435-2 microRNA 4435-2 ncRNA chr9-3257 chr9 18297691 18297901 + 5.66 0.000 Intergenic Intergenic -176357 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr7-5209 chr7 12322500 12322710 + 5.66 0.000 Intergenic Intergenic 81260 NM_001135924 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding chr10-8074 chr10 67394163 67394373 + 5.66 0.000 intron (NM_001127384, intron 5 of 17) ERVL-E-int|LTR|ERVL 9142 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr2-8131 chr2 80819956 80820166 + 5.66 0.000 Intergenic L1PA8A|LINE|L1 506682 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr1-7389 chr1 28922467 28922677 + 5.66 0.000 intron (NM_001166006, intron 1 of 14) AluJr4|SINE|Alu 7996 NM_001166006 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr3-2649 chr3 14881016 14881226 + 5.66 0.000 intron (NM_152536, intron 4 of 19) (TG)n|Simple_repeat|Simple_repeat 62159 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr10-8130 chr10 70223775 70223985 + 5.66 0.000 intron (NM_021129, intron 2 of 10) intron (NM_021129, intron 2 of 10) 9549 NM_021129 5464 Hs.437403 NM_021129 ENSG00000180817 PPA1 HEL-S-66p|IOPPP|PP|PP1|SID6-8061 pyrophosphatase (inorganic) 1 protein-coding chr3-8875 chr3 10564920 10565130 + 5.66 0.000 intron (NM_001353564, intron 1 of 20) MLT1J|LTR|ERVL-MaLR 54936 NM_001353564 491 Hs.268942 NM_001683 ENSG00000157087 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase plasma membrane Ca2+ transporting 2 protein-coding chrX-4547 chrX 68995336 68995546 + 5.66 0.000 Intergenic Intergenic 166444 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr16-3364 chr16 52622982 52623192 + 5.66 0.000 Intergenic Intergenic -16112 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr18-2635 chr18 40040911 40041121 + 5.66 0.000 Intergenic Intergenic -25270 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr14-4634 chr14 54077152 54077362 + 5.66 0.000 Intergenic L1MA1|LINE|L1 -120366 NM_001347913 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr16-6517 chr16 62294837 62295047 + 5.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -258504 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr19-6569 chr19 19558638 19558848 + 5.66 0.000 Intergenic Intergenic 20478 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr10-8270 chr10 75920694 75920904 + 5.66 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 138038 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr2-14402 chr2 220569447 220569657 + 5.66 0.000 Intergenic Intergenic -662987 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr6-5940 chr6 72621277 72621487 + 5.66 0.000 promoter-TSS (NM_001160133) promoter-TSS (NM_001160133) -461 NM_001160130 56479 Hs.445324 NM_019842 ENSG00000185760 KCNQ5 Kv7.5|MRD46 potassium voltage-gated channel subfamily Q member 5 protein-coding chr20-3192 chr20 48226712 48226922 + 5.66 0.000 Intergenic Intergenic -133094 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr4-7642 chr4 84142592 84142802 + 5.66 0.000 intron (NR_125909, intron 7 of 8) AluJb|SINE|Alu 156472 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr8-4720 chr8 141494502 141494712 + 5.66 0.000 intron (NR_102364, intron 3 of 26) intron (NR_102364, intron 3 of 26) 12622 NR_160399 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr8-6684 chr8 81558439 81558649 + 5.66 0.000 Intergenic Intergenic -27154 NR_144370 646486 Hs.586370 NM_001105281 ENSG00000197416 FABP12 - fatty acid binding protein 12 protein-coding chr4-8274 chr4 141458459 141458669 + 5.66 0.000 Intergenic Intergenic -125947 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr3-9590 chr3 55992605 55992815 + 5.66 0.000 intron (NR_132749, intron 10 of 17) intron (NR_132749, intron 10 of 17) -140116 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr17-8081 chr17 54836517 54836727 + 5.66 0.000 Intergenic MER52A|LTR|ERV1 -64069 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chrX-4347 chrX 47869194 47869404 + 5.66 0.000 intron (NM_007137, intron 2 of 4) intron (NM_007137, intron 2 of 4) 32397 NM_007137 347344 Hs.114246 NM_007137 ENSG00000197779 ZNF81 HFZ20|MRX45|dJ54B20.6 zinc finger protein 81 protein-coding chr5-5982 chr5 126996351 126996561 + 5.66 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 34102 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr10-7814 chr10 42943027 42943237 + 5.66 0.000 Intergenic Intergenic 38375 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr4-6939 chr4 17340396 17340606 + 5.66 0.000 Intergenic AluSq|SINE|Alu -19619 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr16-4635 chr16 72997123 72997333 + 5.66 0.000 intron (NM_006885, intron 1 of 9) L2|LINE|L2 50900 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr6-7001 chr6 21261990 21262200 + 5.66 0.000 Intergenic Intergenic 249797 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chrX-2416 chrX 75100369 75100579 + 5.66 0.000 intron (NM_001271696, intron 3 of 15) L2a|LINE|L2 55809 NM_001271698 22 Hs.370480 NM_004299 ENSG00000131269 ABCB7 ABC7|ASAT|Atm1p|EST140535 ATP binding cassette subfamily B member 7 protein-coding KI270733.1-21 KI270733.1 124670 124880 + 5.66 0.000 NA NA NA NA chr3-7551 chr3 192831330 192831540 + 5.66 0.000 intron (NM_178496, intron 1 of 1) MLT1F|LTR|ERVL-MaLR 86421 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr11-7638 chr11 61254595 61254805 + 5.66 0.000 Intergenic LTR16E2|LTR|ERVL 13524 NM_014224 5222 Hs.432854 NM_014224 ENSG00000256713 PGA5 Pg5 pepsinogen 5, group I (pepsinogen A) protein-coding chr7-8735 chr7 76210287 76210497 + 5.66 0.000 intron (NM_001110199, intron 1 of 14) intron (NM_001110199, intron 1 of 14) 8496 NM_001110199 222183 Hs.511025 NM_001039212 ENSG00000177679 SRRM3 - serine/arginine repetitive matrix 3 protein-coding chr22-3278 chr22 46885676 46885886 + 5.66 0.000 intron (NM_001284305, intron 5 of 12) intron (NM_001284305, intron 5 of 12) 30261 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr3-8485 chr3 126938441 126938651 + 5.66 0.000 intron (NM_032343, intron 6 of 7) intron (NM_032343, intron 6 of 7) -50048 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr5-8713 chr5 143156375 143156585 + 5.66 0.000 intron (NM_001349547, intron 20 of 21) MER5A|DNA|hAT-Charlie -36020 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr2-14225 chr2 209936342 209936552 + 5.66 0.000 intron (NM_032504, intron 39 of 63) intron (NM_032504, intron 39 of 63) -66118 NM_001278283 6120 Hs.282260 NM_006916 ENSG00000197713 RPE RPE2-1 ribulose-5-phosphate-3-epimerase protein-coding chr2-14647 chr2 235421580 235421790 + 5.66 0.000 Intergenic Intergenic -72358 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr5-8469 chr5 132177462 132177672 + 5.66 0.000 Intergenic Intergenic -7309 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA chr8-1866 chr8 17348564 17348774 + 5.66 0.000 intron (NM_004686, intron 5 of 13) intron (NM_004686, intron 5 of 13) 64682 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr10-6386 chr10 2418204 2418414 + 5.66 0.000 Intergenic Intergenic 83153 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr1-11144 chr1 235576555 235576765 + 5.66 0.000 intron (NM_004485, intron 2 of 2) intron (NM_004485, intron 2 of 2) -72208 NM_001277155 148789 Hs.498143 NM_152490 ENSG00000162885 B3GALNT2 B3GalNAc-T2|MDDGA11 beta-1,3-N-acetylgalactosaminyltransferase 2 protein-coding chr16-4730 chr16 84132875 84133085 + 5.66 0.000 intron (NM_031463, intron 2 of 5) intron (NM_031463, intron 2 of 5) 12197 NM_031463 83693 Hs.555992 NM_031463 ENSG00000103160 HSDL1 SDR12C3 hydroxysteroid dehydrogenase like 1 protein-coding chr2-12919 chr2 100682169 100682379 + 5.66 0.000 Intergenic Intergenic 78535 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr14-4056 chr14 57936847 57937057 + 5.66 0.000 Intergenic Intergenic -70860 NM_001306087 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr5-7436 chr5 31044692 31044902 + 5.66 0.000 Intergenic Intergenic -148889 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr12-6116 chr12 127968473 127968683 + 5.66 0.000 intron (NR_126452, intron 2 of 3) THE1B|LTR|ERVL-MaLR 15313 NR_126452 104472718 Hs.628661 NR_126452 LINC00508 - long intergenic non-protein coding RNA 508 ncRNA chr11-4557 chr11 123301942 123302152 + 5.66 0.000 Intergenic CpG -56375 NM_001367419 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr20-3310 chr20 15455267 15455477 + 5.66 0.000 intron (NM_001351663, intron 7 of 17) intron (NM_001351663, intron 7 of 17) 258532 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr5-9141 chr5 176553121 176553331 + 5.66 0.000 intron (NM_017675, intron 1 of 31) intron (NM_017675, intron 1 of 31) 3884 NM_017675 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding chr6-4670 chr6 52790217 52790427 + 5.66 0.000 Intergenic L1MC5|LINE|L1 13494 NM_001319059 2938 Hs.446309 NM_145740 ENSG00000243955 GSTA1 GST-epsilon|GST2|GSTA1-1|GTH1 glutathione S-transferase alpha 1 protein-coding chr2-13681 chr2 164006756 164006966 + 5.66 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -270853 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr4-2943 chr4 101168056 101168266 + 5.66 0.000 intron (NM_001130691, intron 2 of 12) L2a|LINE|L2 72711 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr13-1282 chr13 21675818 21676028 + 5.66 0.000 intron (NM_002010, intron 1 of 2) intron (NM_002010, intron 1 of 2) 4850 NM_002010 2254 Hs.111 NM_002010 ENSG00000102678 FGF9 FGF-9|GAF|HBFG-9|HBGF-9|SYNS3 fibroblast growth factor 9 protein-coding chr1-13707 chr1 14848607 14848817 + 5.66 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) -75417 NM_001018000 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr4-7602 chr4 81759097 81759307 + 5.66 0.000 Intergenic Intergenic -287295 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr5-7245 chr5 10858098 10858308 + 5.66 0.000 Intergenic L1ME3Cz|LINE|L1 -96969 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr11-10192 chr11 95555313 95555523 + 5.66 0.000 Intergenic L2a|LINE|L2 234364 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr4-8059 chr4 121736905 121737115 + 5.66 0.000 Intergenic Intergenic 27284 NM_001317839 132332 Hs.27524 NM_152399 ENSG00000164112 TMEM155 - transmembrane protein 155 protein-coding chr11-5075 chr11 112808777 112808987 + 5.66 0.000 Intergenic Intergenic -152538 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr12-7495 chr12 67330114 67330324 + 5.66 0.000 Intergenic AluSz6|SINE|Alu 60861 NM_001329675 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr4-5379 chr4 188231570 188231780 + 5.66 0.000 Intergenic Intergenic 92234 NM_178556 339976 Hs.348618 NM_178556 ENSG00000184108 TRIML1 RNF209 tripartite motif family like 1 protein-coding chr2-14027 chr2 192371812 192372022 + 5.66 0.000 Intergenic Intergenic -176984 NM_001305134 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr2-8374 chr2 111472967 111473177 + 5.66 0.000 intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 22089 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr3-10538 chr3 139597496 139597706 + 5.66 0.000 intron (NM_001320510, intron 3 of 6) intron (NM_001320510, intron 3 of 6) -57859 NM_001130993 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr18-3478 chr18 71193398 71193608 + 5.66 0.000 Intergenic Intergenic 385453 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chrX-4725 chrX 90359479 90359689 + 5.66 0.000 Intergenic AluJb|SINE|Alu 437676 NM_138960 90316 Hs.592220 NM_138960 ENSG00000153779 TGIF2LX TGIFLX TGFB induced factor homeobox 2 like X-linked protein-coding chr9-7806 chr9 80647073 80647283 + 5.66 0.000 Intergenic Intergenic 672155 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr8-3357 chr8 46089724 46089934 + 5.66 0.000 Intergenic GSAT|Satellite|centr 527814 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr13-3770 chr13 43877809 43878019 + 5.66 0.000 intron (NM_144974, intron 1 of 6) MER5B|DNA|hAT-Charlie -1264 NM_001128303 144811 Hs.210586 NM_153218 ENSG00000179630 LACC1 C13orf31|FAMIN laccase domain containing 1 protein-coding chr11-4763 chr11 117689292 117689502 + 5.66 0.000 intron (NM_020693, intron 3 of 32) MER5A1|DNA|hAT-Charlie 107819 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr9-5031 chr9 28264781 28264991 + 5.66 0.000 intron (NM_152570, intron 5 of 6) MLT2C2|LTR|ERVL 454419 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr12-7066 chr12 41514115 41514325 + 5.66 0.000 intron (NM_001164595, intron 5 of 9) intron (NM_001164595, intron 5 of 9) 76481 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr1-10142 chr1 106747039 106747249 + 5.66 0.000 Intergenic Intergenic -71095 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA chr21-1705 chr21 31141749 31141959 + 5.66 0.000 intron (NM_001353684, intron 5 of 12) MER74A|LTR|ERVL 19086 NM_001353684 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr11-4899 chr11 59583444 59583654 + 5.66 0.000 intron (NM_002556, intron 9 of 13) MIRb|SINE|MIR 11609 NR_036120 100422880 NR_036120 ENSG00000264559 MIR3162 mir-3162 microRNA 3162 ncRNA chr3-4408 chr3 197602292 197602502 + 5.66 0.000 Intergenic SVA_D|Retroposon|SVA 25484 NR_003266 220729 Hs.478854 NR_003266 ENSG00000214135 LOC220729 - succinate dehydrogenase complex flavoprotein subunit A pseudogene pseudo chr10-8312 chr10 78271218 78271428 + 5.66 0.000 intron (NR_073447, intron 1 of 2) AluSz|SINE|Alu 3981 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr6-6794 chr6 4720864 4721074 + 5.66 0.000 intron (NM_001368125, intron 2 of 8) intron (NM_001368125, intron 2 of 8) 14831 NM_001368125 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr11-8753 chr11 8932177 8932387 + 5.66 0.000 exon (NM_020643, exon 2 of 7) exon (NM_020643, exon 2 of 7) 665 NM_020643 56673 Hs.277349 NM_020643 ENSG00000176029 C11orf16 - chromosome 11 open reading frame 16 protein-coding chr13-4063 chr13 75789336 75789546 + 5.66 0.000 intron (NM_005358, intron 5 of 29) intron (NM_005358, intron 5 of 29) 28780 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr8-5030 chr8 22095239 22095449 + 5.66 0.000 intron (NR_148728, intron 4 of 19) MER20|DNA|hAT-Charlie 6190 NR_148727 64760 Hs.491223 NM_022749 ENSG00000158863 FAM160B2 RAI16 family with sequence similarity 160 member B2 protein-coding chr18-1705 chr18 2215059 2215269 + 5.66 0.000 Intergenic L1MEf|LINE|L1 356341 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr8-5238 chr8 126519317 126519527 + 5.66 0.000 Intergenic LTR78B|LTR|ERV1 39056 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr20-3170 chr20 42659550 42659760 + 5.66 0.000 intron (NM_133170, intron 7 of 31) intron (NM_133170, intron 7 of 31) -25828 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr17-7736 chr17 33854181 33854391 + 5.66 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 302520 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr18-3421 chr18 63512874 63513084 + 5.66 0.000 Intergenic Intergenic 36021 NM_002639 5268 Hs.55279 NM_002639 ENSG00000206075 SERPINB5 PI5|maspin serpin family B member 5 protein-coding chrX-3635 chrX 95291653 95291863 + 5.66 0.000 Intergenic L1M1|LINE|L1 -228532 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr20-3042 chr20 63783966 63784176 + 5.66 0.000 intron (NM_001369741, intron 2 of 4) intron (NM_001369741, intron 2 of 4) 21432 NM_025224 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr13-4059 chr13 75657468 75657678 + 5.66 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 21243 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr2-12361 chr2 51504855 51505065 + 5.66 0.000 intron (NR_135237, intron 4 of 10) L1PB1|LINE|L1 472359 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr16-6245 chr16 29876849 29877059 + 5.66 0.000 intron (NM_001243332, intron 11 of 17) CpG-9484 13120 NR_015396 440356 Hs.448823 NR_015396 ENSG00000214725 CDIPTOSP CDIPT-AS1 CDIP transferase opposite strand, pseudogene ncRNA chrX-5119 chrX 129074317 129074527 + 5.66 0.000 Intergenic Intergenic 449068 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr4-6041 chr4 2918683 2918893 + 5.66 0.000 intron (NM_014190, intron 13 of 15) L1PA7|LINE|L1 15449 NM_001120 10227 Hs.632581 NM_001120 ENSG00000109736 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding chrX-1256 chrX 102712348 102712558 + 5.66 0.000 promoter-TSS (NM_001350270) promoter-TSS (NM_001350270) 5 NM_001184876 114928 Hs.522729 NM_138437 ENSG00000158301 GPRASP2 DFNX7|GASP2 G protein-coupled receptor associated sorting protein 2 protein-coding chr1-5518 chr1 194026888 194027098 + 5.66 0.000 Intergenic Intergenic 722248 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr3-8218 chr3 47093145 47093355 + 5.66 0.000 intron (NR_146158, intron 9 of 21) L1ME3B|LINE|L1 70727 NM_014159 29072 Hs.517941 NM_012271 ENSG00000181555 SETD2 HBP231|HIF-1|HIP-1|HSPC069|HYPB|KMT3A|LLS|SET2|p231HBP SET domain containing 2, histone lysine methyltransferase protein-coding chr5-7356 chr5 18281816 18282026 + 5.66 0.000 Intergenic Intergenic 474647 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr1-9891 chr1 68906856 68907066 + 5.66 0.000 Intergenic Intergenic -148937 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr3-7705 chr3 48285857 48286067 + 5.66 0.000 Intergenic Intergenic 5716 NR_134638 101060195 Hs.670746 NR_134638 FCF1P2 - FCF1 pseudogene 2 pseudo chr8-4384 chr8 102698727 102698937 + 5.66 0.000 Intergenic Intergenic 42584 NR_160673 101927245 NR_160672 LOC101927245 - uncharacterized LOC101927245 ncRNA chr14-4893 chr14 72265178 72265388 + 5.66 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) -251537 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr3-10554 chr3 141037741 141037951 + 5.66 0.000 Intergenic Intergenic -13501 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr5-7377 chr5 20906593 20906803 + 5.66 0.000 intron (NR_149120, intron 6 of 11) THE1B|LTR|ERVL-MaLR -291163 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA chr3-9942 chr3 89640217 89640427 + 5.66 0.000 Intergenic L1MA3|LINE|L1 532701 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr13-3547 chr13 24310166 24310376 + 5.66 0.000 intron (NM_178540, intron 1 of 3) AluYc|SINE|Alu 691 NM_178540 338872 Hs.362854 NM_178540 ENSG00000240654 C1QTNF9 AQL1|C1QTNF9A|CTRP9 C1q and TNF related 9 protein-coding chr6-6718 chr6 1389762 1389972 + 5.66 0.000 TTS (NR_106778) TTS (NR_106778) 291 NM_001452 2295 Hs.484423 NM_001452 ENSG00000137273 FOXF2 FKHL6|FREAC-2|FREAC2 forkhead box F2 protein-coding chr15-1800 chr15 90201168 90201378 + 5.66 0.000 promoter-TSS (NM_001324032) promoter-TSS (NM_001324032) -57 NM_001324032 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr22-3758 chr22 27284006 27284216 + 5.66 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -26540 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr17-5757 chr17 60213886 60214096 + 5.66 0.000 intron (NM_032582, intron 17 of 33) AluSx1|SINE|Alu 17654 NR_002999 677681 NR_002999 ENSG00000252577 SCARNA20 ACA66 small Cajal body-specific RNA 20 ncRNA chr3-9960 chr3 95156114 95156324 + 5.66 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 217956 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr18-3167 chr18 42886544 42886754 + 5.66 0.000 intron (NM_002930, intron 4 of 4) intron (NM_002930, intron 4 of 4) 229036 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr12-5983 chr12 94629825 94630035 + 5.66 0.000 intron (NM_020698, intron 1 of 3) intron (NM_020698, intron 1 of 3) -13929 NM_001301036 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr12-8203 chr12 123242673 123242883 + 5.66 0.000 intron (NM_001194995, intron 1 of 2) intron (NM_001194995, intron 1 of 2) 9034 NM_001143905 91574 Hs.319128 NM_152269 ENSG00000130921 C12orf65 COXPD7|SPG55 chromosome 12 open reading frame 65 protein-coding chr12-2804 chr12 109845305 109845515 + 5.66 0.000 Intergenic Intergenic -12003 NM_021625 59341 Hs.506713 NM_021625 ENSG00000111199 TRPV4 BCYM3|CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel subfamily V member 4 protein-coding chr9-3768 chr9 125382733 125382943 + 5.66 0.000 Intergenic AluSz|SINE|Alu 121012 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr6-7026 chr6 24056019 24056229 + 5.66 0.000 Intergenic MIR|SINE|MIR -70091 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr4-5542 chr4 123995987 123996197 + 5.66 0.000 Intergenic Intergenic 221828 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr4-7870 chr4 103970568 103970778 + 5.66 0.000 Intergenic Intergenic -250688 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr7-3589 chr7 25173218 25173428 + 5.66 0.000 intron (NM_138811, intron 2 of 9) MER58A|DNA|hAT-Charlie 7031 NM_138811 136895 Hs.122055 NM_138811 ENSG00000153790 C7orf31 - chromosome 7 open reading frame 31 protein-coding chr11-6285 chr11 60584681 60584891 + 5.66 0.000 Intergenic MSTD|LTR|ERVL-MaLR -30965 NR_026946 283197 Hs.372650 NM_174939 ENSG00000181995 LINC00301 C11orf64|NCRNA00301 long intergenic non-protein coding RNA 301 ncRNA chr1-5929 chr1 21644003 21644213 + 5.66 0.000 intron (NM_001350526, intron 5 of 28) intron (NM_001350526, intron 5 of 28) 7790 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr13-2380 chr13 41023938 41024148 + 5.66 0.000 intron (NM_001370329, intron 1 of 9) intron (NM_001370329, intron 1 of 9) -4727 NM_172373 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr18-1541 chr18 13824078 13824288 + 5.66 0.000 promoter-TSS (NM_005913) promoter-TSS (NM_005913) 34 NM_005913 4161 Hs.248145 NM_005913 ENSG00000176136 MC5R MC2 melanocortin 5 receptor protein-coding chr3-7440 chr3 125564568 125564778 + 5.66 0.000 intron (NM_022776, intron 6 of 12) AluSx1|SINE|Alu 30824 NM_022776 114885 Hs.477440 NM_022776 ENSG00000144909 OSBPL11 ORP-11|ORP11|OSBP12|TCCCIA00292 oxysterol binding protein like 11 protein-coding chrX-4220 chrX 37830356 37830566 + 5.66 0.000 Intergenic Intergenic 17110 NM_006520 6990 Hs.446392 NM_006520 ENSG00000165169 DYNLT3 RP3|TCTE1L|TCTEX1L dynein light chain Tctex-type 3 protein-coding chrX-5346 chrX 148500843 148501053 + 5.66 0.000 5' UTR (NM_001169122, exon 1 of 20) 5' UTR (NM_001169122, exon 1 of 20) 331 NM_001169124 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chrX-5143 chrX 130682622 130682832 + 5.66 0.000 intron (NM_006375, intron 5 of 14) intron (NM_006375, intron 5 of 14) -119909 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr9-8642 chr9 129397797 129398007 + 5.66 0.000 Intergenic MIRb|SINE|MIR 60979 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr2-12244 chr2 44142806 44143016 + 5.66 0.000 Intergenic AluSz|SINE|Alu -25892 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr9-4744 chr9 130553657 130553867 + 5.66 0.000 Intergenic Intergenic 25732 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr15-2926 chr15 45703955 45704165 + 5.66 0.000 Intergenic L2c|LINE|L2 -1135 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr17-4543 chr17 78281958 78282168 + 5.66 0.000 Intergenic AluJb|SINE|Alu -3571 NR_073178 100996291 Hs.744493 NR_073178 ENSG00000204277 LINC01993 - long intergenic non-protein coding RNA 1993 ncRNA chr7-8812 chr7 83408746 83408956 + 5.66 0.000 intron (NM_001178129, intron 5 of 16) intron (NM_001178129, intron 5 of 16) 232580 NM_001178129 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr13-3370 chr13 78978591 78978801 + 5.66 0.000 Intergenic Intergenic -138646 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr1-11134 chr1 234423341 234423551 + 5.66 0.000 intron (NM_005646, intron 20 of 29) L2|LINE|L2 49745 NM_001301733 388753 Hs.23198 NM_001012985 ENSG00000168275 COA6 C1orf31|CEMCOX4 cytochrome c oxidase assembly factor 6 protein-coding chr9-8199 chr9 108259133 108259343 + 5.66 0.000 Intergenic L1MEd|LINE|L1 596748 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr8-3420 chr8 71654414 71654624 + 5.66 0.000 Intergenic Intergenic -106425 NM_001370336 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr21-1479 chr21 37799859 37800069 + 5.66 0.000 intron (NM_002240, intron 2 of 3) intron (NM_002240, intron 2 of 3) 116493 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr2-10124 chr2 64516775 64516985 + 5.66 0.000 Intergenic Intergenic 7275 NR_136167 101927402 Hs.187018 NR_136167 ENSG00000260101 LOC101927402 - uncharacterized LOC101927402 ncRNA chr16-2222 chr16 87909430 87909640 + 5.66 0.000 intron (NM_001739, intron 2 of 6) intron (NM_001739, intron 2 of 6) 26994 NM_001367225 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr7-7199 chr7 14351237 14351447 + 5.66 0.000 intron (NM_001350717, intron 20 of 24) intron (NM_001350717, intron 20 of 24) -359917 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chrX-3171 chrX 33528007 33528217 + 5.66 0.000 Intergenic L1M1|LINE|L1 -188724 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr19-3350 chr19 10347848 10348058 + 5.66 0.000 Intergenic Intergenic -8329 NM_001320608 3385 Hs.654563 NM_002162 ENSG00000076662 ICAM3 CD50|CDW50|ICAM-R intercellular adhesion molecule 3 protein-coding chr2-10033 chr2 27728897 27729107 + 5.66 0.000 intron (NR_160725, intron 2 of 2) intron (NR_160725, intron 2 of 2) 12879 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr12-7460 chr12 63767324 63767534 + 5.66 0.000 Intergenic AluJb|SINE|Alu -12480 NM_014254 10329 Hs.216386 NM_014254 ENSG00000118600 RXYLT1 HP10481|MDDGA10|TMEM5 ribitol xylosyltransferase 1 protein-coding chr12-7756 chr12 94698119 94698329 + 5.66 0.000 Intergenic Intergenic -47667 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr2-12561 chr2 69335754 69335964 + 5.66 0.000 intron (NM_002056, intron 14 of 18) AluJb|SINE|Alu 51368 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr15-4682 chr15 65330372 65330582 + 5.66 0.000 intron (NM_004884, intron 10 of 13) intron (NM_004884, intron 10 of 13) 25800 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr4-8129 chr4 127061018 127061228 + 5.66 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -571834 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr1-10326 chr1 152243999 152244209 + 5.66 0.000 Intergenic L2a|LINE|L2 -19908 NM_001009931 388697 Hs.490162 NM_001009931 ENSG00000197915 HRNR FLG3|S100A16|S100a18 hornerin protein-coding chr9-6962 chr9 105026532 105026742 + 5.66 0.000 Intergenic Intergenic -98482 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chrX-5458 chrX 154552898 154553108 + 5.66 0.000 intron (NM_001321396, intron 2 of 9) intron (NM_001321396, intron 2 of 9) 5156 NM_003639 8517 Hs.43505 NM_003639 ENSG00000269335 IKBKG AMCBX1|EDAID1|FIP-3|FIP3|Fip3p|IKK-gamma|IKKAP1|IKKG|IMD33|IP|IP1|IP2|IPD2|NEMO|ZC2HC9 inhibitor of nuclear factor kappa B kinase regulatory subunit gamma protein-coding chr2-6676 chr2 15645419 15645629 + 5.66 0.000 Intergenic MIRb|SINE|MIR -45258 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr8-6046 chr8 24413983 24414193 + 5.66 0.000 intron (NR_125808, intron 1 of 5) intron (NR_125808, intron 1 of 5) -26938 NM_003817 8756 Hs.116147 NM_003817 ENSG00000069206 ADAM7 ADAM 7|ADAM-7|EAPI|GP-83|GP83 ADAM metallopeptidase domain 7 protein-coding chr12-8385 chr12 132815139 132815349 + 5.66 0.000 intron (NM_001172557, intron 3 of 15) intron (NM_001172557, intron 3 of 15) 13145 NM_005895 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr2-8525 chr2 130290076 130290286 + 5.66 0.000 Intergenic AluJo|SINE|Alu 51927 NM_001321119 84317 Hs.104203 NM_032357 ENSG00000136710 CCDC115 CDG2O|ccp1 coiled-coil domain containing 115 protein-coding chr3-10498 chr3 136153244 136153454 + 5.66 0.000 intron (NM_018133, intron 1 of 1) L2b|LINE|L2 41119 NM_001145417 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr3-6726 chr3 137084995 137085205 + 5.66 0.000 Intergenic Intergenic 127117 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr6-8489 chr6 157259355 157259565 + 5.66 0.000 Intergenic Intergenic 64799 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr7-6721 chr7 4052941 4053151 + 5.66 0.000 intron (NM_152744, intron 19 of 44) AluSg4|SINE|Alu -76639 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr9-2235 chr9 13311289 13311499 + 5.66 0.000 Intergenic AluSz|SINE|Alu -31681 NM_001330637 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr3-10900 chr3 171269728 171269938 + 5.66 0.000 intron (NM_001161563, intron 2 of 31) intron (NM_001161563, intron 2 of 31) -163074 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr8-5433 chr8 35819102 35819312 + 5.66 0.000 Intergenic L1PA8|LINE|L1 -108887 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr4-8338 chr4 146720932 146721142 + 5.66 0.000 intron (NR_133922, intron 12 of 13) intron (NR_133922, intron 12 of 13) 82144 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr3-9999 chr3 100048219 100048429 + 5.66 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) 66189 NM_182909 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr14-4455 chr14 33835910 33836120 + 5.66 0.000 Intergenic Intergenic 115059 NM_001308103 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr10-9161 chr10 129169769 129169979 + 5.66 0.000 Intergenic Intergenic 257041 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr1-14115 chr1 31216009 31216219 + 5.66 0.000 intron (NM_024522, intron 1 of 6) intron (NM_024522, intron 1 of 6) 23773 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr7-7295 chr7 39929653 39929863 + 5.66 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 19661 NR_158201 112267983 Hs.587424 NR_158201 LOC112267983 - uncharacterized LOC112267983 ncRNA chr2-13527 chr2 151540717 151540927 + 5.66 0.000 intron (NM_001271208, intron 136 of 182) intron (NM_001271208, intron 136 of 182) 130920 NM_018151 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding chr7-4037 chr7 157429426 157429636 + 5.66 0.000 Intergenic Intergenic -36700 NR_110157 101927914 Hs.623826 NR_110157 ENSG00000234210 LOC101927914 - uncharacterized LOC101927914 ncRNA chr15-3346 chr15 82174681 82174891 + 5.66 0.000 intron (NM_001040610, intron 13 of 17) intron (NM_001040610, intron 13 of 17) 86192 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr15-2837 chr15 40371384 40371594 + 5.66 0.000 3' UTR (NM_033510, exon 8 of 8) 3' UTR (NM_033510, exon 8 of 8) -11232 NM_001142761 90417 Hs.525796 NM_033286 ENSG00000128944 KNSTRN C15orf23|HSD11|SKAP|TRAF4AF1 kinetochore localized astrin (SPAG5) binding protein protein-coding chr20-4403 chr20 58810538 58810748 + 5.66 0.000 Intergenic Intergenic 7051 NR_029844 407022 NR_029844 ENSG00000284040 MIR296 MIRN296|miRNA296|mir-296 microRNA 296 ncRNA chr16-6179 chr16 25614398 25614608 + 5.66 0.000 Intergenic AluSz6|SINE|Alu -77456 NM_006040 9951 Hs.655275 NM_006040 ENSG00000182601 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate-glucosamine 3-sulfotransferase 4 protein-coding chr1-10939 chr1 211838452 211838662 + 5.66 0.000 intron (NR_135818, intron 2 of 2) intron (NR_135818, intron 2 of 2) 7596 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr9-5304 chr9 85857932 85858142 + 5.66 0.000 Intergenic Intergenic 52035 NR_029410 389765 Hs.715986 NR_029410 LOC389765 - kinesin family member 27 pseudogene pseudo chr14-5004 chr14 77135693 77135903 + 5.66 0.000 intron (NM_174976, intron 2 of 2) intron (NM_174976, intron 2 of 2) 4946 NM_001364172 283576 Hs.525485 NM_174976 ENSG00000177108 ZDHHC22 C14orf59 zinc finger DHHC-type containing 22 protein-coding chr9-4676 chr9 123286863 123287073 + 5.66 0.000 Intergenic AluSc8|SINE|Alu -18382 NM_018387 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr17-7671 chr17 30361155 30361365 + 5.66 0.000 Intergenic Intergenic -17667 NM_001304 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr19-7017 chr19 49782540 49782750 + 5.66 0.000 exon (NM_014203, exon 4 of 24) exon (NM_014203, exon 4 of 24) -9221 NR_106857 102465479 NR_106857 ENSG00000276270 MIR6799 hsa-mir-6799 microRNA 6799 ncRNA chr15-2114 chr15 69614724 69614934 + 5.66 0.000 intron (NR_126437, intron 2 of 5) intron (NR_126437, intron 2 of 5) 22629 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr15-4745 chr15 68930851 68931061 + 5.66 0.000 intron (NM_001184780, intron 1 of 15) CpG 431 NM_001184780 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr15-4195 chr15 24924595 24924805 + 5.66 0.000 intron (NM_001349456, intron 4 of 12) AluJr|SINE|Alu -30193 NM_003097 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr15-5091 chr15 88198393 88198603 + 5.66 0.000 intron (NM_001007156, intron 3 of 15) intron (NM_001007156, intron 3 of 15) 7476 NM_001320135 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr6-4498 chr6 37175852 37176062 + 5.66 0.000 TTS (NM_002648) TTS (NM_002648) 5805 NM_001243186 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr10-6422 chr10 17134974 17135184 + 5.66 0.000 Intergenic Intergenic -5262 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr5-4609 chr5 31728953 31729163 + 5.66 0.000 intron (NM_178140, intron 1 of 24) intron (NM_178140, intron 1 of 24) 89927 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr12-4164 chr12 86513636 86513846 + 5.66 0.000 intron (NM_001351285, intron 2 of 8) L1M4|LINE|L1 231408 NR_162123 113839519 NR_162123 MIR3059 - microRNA 3059 ncRNA chr14-3288 chr14 83812172 83812382 + 5.66 0.000 Intergenic MLT2B1|LTR|ERVL 1169645 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr22-3545 chr22 16816336 16816546 + 5.66 0.000 intron (NM_001318251, intron 1 of 3) intron (NM_001318251, intron 1 of 3) 5258 NM_001318251 150165 Hs.356069 NM_175878 ENSG00000172967 XKR3 XRG3|XTES XK related 3 protein-coding chr20-2223 chr20 62576474 62576684 + 5.66 0.000 Intergenic Intergenic 11667 NR_029676 406923 NR_029676 ENSG00000284508 MIR133A2 MIRN133A2|mir-133a-2 microRNA 133a-2 ncRNA chr14-5311 chr14 101599583 101599793 + 5.66 0.000 Intergenic Intergenic 38337 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chrX-5385 chrX 151145701 151145911 + 5.66 0.000 Intergenic L1PA17|LINE|L1 -22416 NR_036256 100422930 NR_036256 ENSG00000265789 MIR4330 - microRNA 4330 ncRNA chr11-6158 chr11 44007908 44008118 + 5.66 0.000 Intergenic Intergenic -39968 NM_001363113 390110 Hs.558851 NM_001031854 ENSG00000205126 ACCSL - 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like protein-coding chr9-7794 chr9 79831137 79831347 + 5.66 0.000 intron (NR_121213, intron 1 of 2) intron (NR_121213, intron 1 of 2) 6712 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr7-8665 chr7 71972561 71972771 + 5.66 0.000 intron (NM_001363460, intron 4 of 5) intron (NM_001363460, intron 4 of 5) 364725 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr2-9390 chr2 230982050 230982260 + 5.66 0.000 Intergenic Intergenic 13877 NR_033879 348761 Hs.404807 NR_033879 ENSG00000238062 SPATA3-AS1 - SPATA3 antisense RNA 1 (head to head) ncRNA chr1-8146 chr1 13434093 13434303 + 5.66 0.000 Intergenic LTR12C|LTR|ERV1 23748 NM_001099852 645425 NM_001099852 ENSG00000204478 PRAMEF20 PRAMEF21 PRAME family member 20 protein-coding chr20-3373 chr20 33937624 33937834 + 5.66 0.000 Intergenic MER113|DNA|hAT-Charlie -56182 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr1-9640 chr1 47044412 47044622 + 5.54 0.000 intron (NM_178033, intron 8 of 11) L1MA8|LINE|L1 20848 NM_178033 260293 Hs.439760 NM_178033 ENSG00000186377 CYP4X1 CYPIVX1 cytochrome P450 family 4 subfamily X member 1 protein-coding chr4-2286 chr4 2274821 2275031 + 5.54 0.000 intron (NM_020972, intron 8 of 12) MLT1D|LTR|ERVL-MaLR -12817 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr21-701 chr21 29114575 29114785 + 5.54 0.000 intron (NM_001286622, intron 6 of 8) AluJb|SINE|Alu -7310 NM_001371376 chr5-6619 chr5 39270460 39270670 + 5.54 0.000 promoter-TSS (NM_001243093) promoter-TSS (NM_001243093) 84 NM_001243093 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr13-4331 chr13 101846309 101846519 + 5.54 0.000 intron (NM_001321937, intron 3 of 3) intron (NM_001321937, intron 3 of 3) 70231 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr22-3738 chr22 26205022 26205232 + 5.54 0.000 intron (NM_001184776, intron 1 of 14) intron (NM_001184776, intron 1 of 14) 35653 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr14-2686 chr14 77240053 77240263 + 5.54 0.000 intron (NM_020431, intron 12 of 23) intron (NM_020431, intron 12 of 23) -26060 NR_031661 100302236 NR_031661 ENSG00000221754 MIR1260A MIR1260|MIRN1260|hsa-mir-1260|hsa-mir-1260a|mir-1260a microRNA 1260a ncRNA chr9-6507 chr9 101792129 101792339 + 5.54 0.000 Intergenic Intergenic -53654 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr5-7103 chr5 180370496 180370706 + 5.54 0.000 Intergenic MIRb|SINE|MIR -17265 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr2-14673 chr2 236862286 236862496 + 5.54 0.000 Intergenic Intergenic 193776 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr4-5563 chr4 144299193 144299403 + 5.54 0.000 Intergenic MIR|SINE|MIR -158580 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr4-5012 chr4 139040928 139041138 + 5.54 0.000 intron (NM_012118, intron 1 of 2) intron (NM_012118, intron 1 of 2) 25252 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr4-3263 chr4 96542112 96542322 + 5.54 0.000 intron (NR_147149, intron 2 of 3) LTR48|LTR|ERV1 231514 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr4-7935 chr4 108944191 108944401 + 5.54 0.000 intron (NM_001256074, intron 6 of 31) intron (NM_001256074, intron 6 of 31) -181243 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr14-3800 chr14 64765959 64766169 + 5.54 0.000 TTS (NM_001355437) TTS (NM_001355437) 19622 NR_107009 102465841 NR_107009 ENSG00000284269 MIR7855 hsa-mir-7855 microRNA 7855 ncRNA chr2-14240 chr2 211672149 211672359 + 5.54 0.000 intron (NM_001042599, intron 14 of 26) intron (NM_001042599, intron 14 of 26) 754106 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr4-5927 chr4 150309796 150310006 + 5.54 0.000 intron (NM_001367550, intron 52 of 56) intron (NM_001367550, intron 52 of 56) 231456 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr21-944 chr21 42751091 42751301 + 5.54 0.000 exon (NM_001001567, exon 8 of 19) exon (NM_001001567, exon 8 of 19) 28798 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr3-6603 chr3 126246267 126246477 + 5.54 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -65186 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr3-5596 chr3 8575950 8576160 + 5.54 0.000 Intergenic Intergenic 4273 NR_024065 29931 Hs.433151 NM_013343 LINC00312 ERR-10|ERR10|LMCD1DN|LOH3CR2A|NAG-7|NAG7|NCRNA00312 long intergenic non-protein coding RNA 312 ncRNA chr2-11898 chr2 23947854 23948064 + 5.54 0.000 intron (NM_181713, intron 1 of 6) AluSq2|SINE|Alu 7496 NM_181713 165324 Hs.591576 NM_181713 ENSG00000173960 UBXN2A UBXD4 UBX domain protein 2A protein-coding chr13-3963 chr13 61957283 61957493 + 5.54 0.000 Intergenic Intergenic 72160 NR_046995 100874143 Hs.552684 NR_046995 ENSG00000229578 LINC00358 - long intergenic non-protein coding RNA 358 ncRNA chr3-10984 chr3 178589414 178589624 + 5.54 0.000 intron (NM_001278911, intron 1 of 4) AluJr4|SINE|Alu 30669 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr4-4269 chr4 23283314 23283524 + 5.54 0.000 Intergenic L1MEd|LINE|L1 569330 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr13-4147 chr13 84935023 84935233 + 5.54 0.000 Intergenic Intergenic 151474 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chrX-3437 chrX 20646724 20646934 + 5.54 0.000 Intergenic L1PA10|LINE|L1 -379920 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr2-7079 chr2 170397173 170397383 + 5.54 0.000 intron (NM_001083615, intron 16 of 33) intron (NM_001083615, intron 16 of 33) -46335 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr9-5278 chr9 82660553 82660763 + 5.54 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 402484 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr19-6418 chr19 15090238 15090448 + 5.54 0.000 Intergenic AluSx1|SINE|Alu 3277 NM_001004713 126370 Hs.631610 NM_001004713 ENSG00000094661 OR1I1 OR19-20|OR1I1P|OR1I1Q olfactory receptor family 1 subfamily I member 1 protein-coding chr17-8323 chr17 72334199 72334409 + 5.54 0.000 Intergenic MIRb|SINE|MIR -8507 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr1-4895 chr1 36996123 36996333 + 5.54 0.000 intron (NM_000831, intron 1 of 15) MIRb|SINE|MIR 38287 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr13-3977 chr13 64029150 64029360 + 5.54 0.000 intron (NR_145420, intron 2 of 5) LTR1A2|LTR|ERV1 46756 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr2-8815 chr2 169328006 169328216 + 5.54 0.000 intron (NM_004525, intron 1 of 78) SVA_F|Retroposon|SVA 34423 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chrX-5325 chrX 145877161 145877371 + 5.54 0.000 Intergenic Intergenic 55918 NM_001144006 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chr3-8618 chr3 169112303 169112513 + 5.54 0.000 intron (NM_001366467, intron 8 of 15) intron (NM_001366467, intron 8 of 15) 33115 NM_001366472 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr7-8411 chr7 45813184 45813394 + 5.54 0.000 Intergenic Intergenic 8060 NR_146388 730234 Hs.714106 NR_146388 LOC730234 - uncharacterized LOC730234 ncRNA chr17-7301 chr17 4371721 4371931 + 5.54 0.000 Intergenic L2a|LINE|L2 -5152 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr16-3362 chr16 50448514 50448724 + 5.54 0.000 Intergenic Intergenic -53486 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA chr9-8056 chr9 97302722 97302932 + 5.54 0.000 intron (NR_036528, intron 14 of 50) ERVL-B4-int|LTR|ERVL -4510 NM_001348010 100499483 Hs.435629 NM_020893 ENSG00000197816 CCDC180 C9orf174 coiled-coil domain containing 180 protein-coding chr12-8099 chr12 118854780 118854990 + 5.54 0.000 Intergenic AluJb|SINE|Alu -21349 NR_134997 105370016 Hs.550627 NR_134997 ENSG00000255814 LINC02439 - long intergenic non-protein coding RNA 2439 ncRNA chr1-6804 chr1 89394824 89395034 + 5.54 0.000 Intergenic Intergenic -12750 NR_003133 400759 Hs.661968 NR_003133 ENSG00000225492 GBP1P1 - guanylate binding protein 1 pseudogene 1 pseudo chr8-4872 chr8 58488830 58489040 + 5.54 0.000 Intergenic AluSp|SINE|Alu 11228 NM_000780 1581 Hs.1644 NM_000780 ENSG00000167910 CYP7A1 CP7A|CYP7|CYPVII cytochrome P450 family 7 subfamily A member 1 protein-coding chr2-13069 chr2 110713802 110714012 + 5.54 0.000 Intergenic MamGyp-int|LTR|Gypsy -18666 NM_001142807 55289 Hs.253320 NM_018308 ENSG00000153093 ACOXL - acyl-CoA oxidase like protein-coding chr18-3327 chr18 56448026 56448236 + 5.54 0.000 Intergenic Intergenic 190461 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr4-8557 chr4 165920917 165921127 + 5.54 0.000 intron (NM_001204760, intron 1 of 9) intron (NM_001204760, intron 1 of 9) 47785 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr8-7075 chr8 117302455 117302665 + 5.54 0.000 Intergenic Intergenic 167565 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr12-7157 chr12 48540452 48540662 + 5.54 0.000 Intergenic MamGypLTR2b|LTR|Gypsy 14925 NM_001005203 341568 Hs.524373 NM_001005203 ENSG00000284723 OR8S1 - olfactory receptor family 8 subfamily S member 1 protein-coding chr12-8249 chr12 124594810 124595020 + 5.54 0.000 Intergenic MIRb|SINE|MIR -27303 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr14-4240 chr14 100693977 100694187 + 5.54 0.000 Intergenic Intergenic -32783 NM_003836 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chr11-9048 chr11 27861098 27861308 + 5.54 0.000 Intergenic Intergenic -139173 NM_170731 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chrX-1865 chrX 118856242 118856452 + 5.54 0.000 intron (NR_110393, intron 6 of 6) intron (NR_110393, intron 6 of 6) 16791 NR_110393 101928287 Hs.496647 NR_110393 ENSG00000203650 LINC01285 - long intergenic non-protein coding RNA 1285 ncRNA chr3-3727 chr3 186239795 186240005 + 5.54 0.000 intron (NM_001346, intron 20 of 24) (T)n|Simple_repeat|Simple_repeat 122334 NM_001346 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr3-9490 chr3 50446401 50446611 + 5.54 0.000 intron (NM_001291101, intron 2 of 37) intron (NM_001291101, intron 2 of 37) 57128 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr1-9402 chr1 31684172 31684382 + 5.54 0.000 intron (NM_001856, intron 31 of 70) intron (NM_001856, intron 31 of 70) 19740 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr8-4590 chr8 129971792 129972002 + 5.54 0.000 intron (NM_001353245, intron 1 of 13) intron (NM_001353245, intron 1 of 13) -32086 NM_001353266 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr19-3472 chr19 34902802 34903012 + 5.54 0.000 Intergenic LTR87|LTR|ERVL? -2408 NR_146451 100652911 Hs.292009 NR_146451 ENSG00000269037 LINC01838 - long intergenic non-protein coding RNA 1838 ncRNA chr20-2816 chr20 57884861 57885071 + 5.54 0.000 Intergenic Intergenic -118938 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr1-7601 chr1 245285519 245285729 + 5.54 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) -51107 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr2-6004 chr2 77517594 77517804 + 5.54 0.000 3' UTR (NM_001282928, exon 2 of 2) 3' UTR (NM_001282928, exon 2 of 2) 4677 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr15-4144 chr15 85874146 85874356 + 5.54 0.000 Intergenic Intergenic 48616 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chrX-4049 chrX 18622783 18622993 + 5.54 0.000 intron (NM_001037343, intron 17 of 21) intron (NM_001037343, intron 17 of 21) 49215 NM_000330 6247 Hs.715725 NM_000330 ENSG00000102104 RS1 RS|XLRS1 retinoschisin 1 protein-coding chr14-4222 chr14 96894349 96894559 + 5.54 0.000 Intergenic HAL1|LINE|L1 -49125 NR_104113 145249 Hs.592323 NR_104113 ENSG00000225163 LINC00618 C14orf63 long intergenic non-protein coding RNA 618 ncRNA chr4-5522 chr4 99458788 99458998 + 5.54 0.000 Intergenic Intergenic -23383 NM_000673 131 Hs.389 NM_000673 ENSG00000196344 ADH7 ADH4 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding chr4-6352 chr4 100836682 100836892 + 5.54 0.000 Intergenic Intergenic -161674 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chr16-6735 chr16 74516060 74516270 + 5.54 0.000 intron (NM_001145666, intron 1 of 25) L1PA7|LINE|L1 90949 NM_012201 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chr7-7172 chr7 6056909 6057119 + 5.54 0.000 intron (NM_001134335, intron 1 of 14) AluJo|SINE|Alu 2161 NM_014413 27102 Hs.520205 NM_014413 ENSG00000086232 EIF2AK1 HCR|HRI eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding chr18-2760 chr18 475138 475348 + 5.54 0.000 intron (NM_130386, intron 2 of 9) intron (NM_130386, intron 2 of 9) 25458 NM_130386 81035 Hs.464422 NM_030781 ENSG00000158270 COLEC12 CLP1|NSR2|SCARA4|SRCL collectin subfamily member 12 protein-coding chr12-7961 chr12 109800243 109800453 + 5.54 0.000 intron (NM_001177433, intron 3 of 12) AluJr|SINE|Alu 14448 NM_001177431 59341 Hs.506713 NM_021625 ENSG00000111199 TRPV4 BCYM3|CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel subfamily V member 4 protein-coding chr3-8233 chr3 48620751 48620961 + 5.54 0.000 TTS (NM_001008269) TTS (NM_001008269) 913 NM_001008269 440955 Hs.631922 NM_001008269 ENSG00000183396 TMEM89 - transmembrane protein 89 protein-coding chr2-6947 chr2 113996964 113997174 + 5.54 0.000 intron (NR_148508, intron 1 of 1) intron (NR_148508, intron 1 of 1) -17085 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr7-4436 chr7 116525453 116525663 + 5.54 0.000 promoter-TSS (NM_001172896) promoter-TSS (NM_001172896) 522 NM_001753 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr2-12949 chr2 102597972 102598182 + 5.54 0.000 Intergenic Intergenic -21476 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr20-3368 chr20 33236162 33236372 + 5.54 0.000 intron (NM_001243193, intron 1 of 8) intron (NM_001243193, intron 1 of 8) 271 NM_001243193 51297 Hs.211092 NM_016583 ENSG00000198183 BPIFA1 LUNX|NASG|PLUNC|SPLUNC1|SPURT|bA49G10.5 BPI fold containing family A member 1 protein-coding chrX-2016 chrX 15505060 15505270 + 5.54 0.000 intron (NM_203281, intron 1 of 18) intron (NM_203281, intron 1 of 18) -2143 NM_001721 660 Hs.495731 NM_001721 ENSG00000102010 BMX ETK|PSCTK2|PSCTK3 BMX non-receptor tyrosine kinase protein-coding chr16-6568 chr16 66038552 66038762 + 5.54 0.000 Intergenic Intergenic -328034 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr17-5548 chr17 44249026 44249236 + 5.54 0.000 3' UTR (NM_000342, exon 20 of 20) 3' UTR (NM_000342, exon 20 of 20) 19004 NM_000342 6521 Hs.210751 NM_000342 ENSG00000004939 SLC4A1 AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR solute carrier family 4 member 1 (Diego blood group) protein-coding chr16-6216 chr16 28106197 28106407 + 5.54 0.000 intron (NM_001270940, intron 20 of 24) intron (NM_001270940, intron 20 of 24) -42588 NM_001323900 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr7-6397 chr7 153301628 153301838 + 5.54 0.000 Intergenic Intergenic 110501 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chrX-5210 chrX 135011199 135011409 + 5.54 0.000 Intergenic Intergenic 11238 NM_001078173 441518 Hs.378813 NM_001078173 ENSG00000212747 RTL8B CXX1c|FAM127C|MAR8B|SIRH4 retrotransposon Gag like 8B protein-coding chr13-1529 chr13 25991824 25992034 + 5.54 0.000 intron (NM_016529, intron 35 of 36) MLT1H|LTR|ERVL-MaLR 59131 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr1-5712 chr1 65066607 65066817 + 5.54 0.000 5' UTR (NM_001321854, exon 2 of 26) 5' UTR (NM_001321854, exon 2 of 26) 1034 NM_001321852 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr12-4465 chr12 15269047 15269257 + 5.54 0.000 Intergenic Intergenic -47735 NM_001190726 85004 Hs.199487 NM_032918 ENSG00000134533 RERG - RAS like estrogen regulated growth inhibitor protein-coding chr16-5363 chr16 85869029 85869239 + 5.54 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -30028 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr22-3178 chr22 31987866 31988076 + 5.54 0.000 intron (NR_149128, intron 3 of 4) intron (NR_149128, intron 3 of 4) 17148 NR_149128 105372999 Hs.512525 NR_149128 LINC02558 - long intergenic non-protein coding RNA 2558 ncRNA chr7-8880 chr7 91388964 91389174 + 5.54 0.000 Intergenic AluSz6|SINE|Alu 124636 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr3-10086 chr3 109444504 109444714 + 5.54 0.000 intron (NR_109841, intron 2 of 4) L1M1|LINE|L1 34619 NR_109841 401082 Hs.477089 NM_001145553 ENSG00000228980 LINC01205 - long intergenic non-protein coding RNA 1205 ncRNA chr14-2803 chr14 22410644 22410854 + 5.54 0.000 intron (NR_148362, intron 1 of 5) MLT1I|LTR|ERVL-MaLR 22004 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr21-1680 chr21 27701110 27701320 + 5.54 0.000 Intergenic Intergenic -21164 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chrX-5318 chrX 144757706 144757916 + 5.54 0.000 Intergenic L1PA10|LINE|L1 -489692 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr14-3592 chr14 36047507 36047717 + 5.54 0.000 Intergenic Intergenic -22815 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chr9-6387 chr9 32930067 32930277 + 5.54 0.000 Intergenic AluJb|SINE|Alu 71404 NM_001195249 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr5-6891 chr5 129945633 129945843 + 5.54 0.000 intron (NM_175856, intron 2 of 2) intron (NM_175856, intron 2 of 2) 41273 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr13-3333 chr13 67136614 67136824 + 5.54 0.000 intron (NM_001318372, intron 2 of 4) intron (NM_001318372, intron 2 of 4) 93617 NM_001318372 5101 Hs.654709 NM_020403 ENSG00000184226 PCDH9 - protocadherin 9 protein-coding chr14-4298 chr14 20869497 20869707 + 5.54 0.000 Intergenic AluJb|SINE|Alu -21801 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding chr2-9636 chr2 15768851 15769061 + 5.54 0.000 Intergenic Intergenic 78174 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr6-6160 chr6 3244661 3244871 + 5.54 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 13363 NR_147505 100422781 Hs.664539 NR_147505 LOC100422781 - uncharacterized LOC100422781 ncRNA chr5-8772 chr5 148178006 148178216 + 5.54 0.000 Intergenic L1MA10|LINE|L1 9565 NM_001001325 408187 Hs.553815 NM_001001325 ENSG00000196800 SPINK14 SPINK5L2 serine peptidase inhibitor, Kazal type 14 (putative) protein-coding chr8-6214 chr8 37487524 37487734 + 5.54 0.000 intron (NR_121620, intron 1 of 6) intron (NR_121620, intron 1 of 6) 6284 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr1-16143 chr1 205396944 205397154 + 5.54 0.000 intron (NR_037583, intron 2 of 3) intron (NR_037583, intron 2 of 3) 23797 NR_038425 284576 Hs.585440 NR_038425 ENSG00000226235 LEMD1-AS1 - LEMD1 antisense RNA 1 ncRNA chr4-6932 chr4 16544853 16545063 + 5.54 0.000 intron (NM_001304435, intron 5 of 7) L2a|LINE|L2 318295 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr2-14032 chr2 193905565 193905775 + 5.54 0.000 Intergenic Intergenic -438599 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr21-485 chr21 46049486 46049696 + 5.54 0.000 Intergenic Intergenic -48521 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr15-3763 chr15 63942868 63943078 + 5.54 0.000 intron (NM_014326, intron 4 of 11) L2c|LINE|L2 14699 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr22-2631 chr22 33226572 33226782 + 5.54 0.000 Intergenic Intergenic 118148 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA chr10-9189 chr10 131885506 131885716 + 5.54 0.000 Intergenic Intergenic -15397 NM_018461 55844 Hs.380372 NM_018461 ENSG00000175470 PPP2R2D B55D|B55delta|MDS026 protein phosphatase 2 regulatory subunit Bdelta protein-coding chr4-6326 chr4 89584037 89584247 + 5.54 0.000 Intergenic Intergenic -252259 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr4-5924 chr4 148447806 148448016 + 5.54 0.000 Intergenic Intergenic -3213 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr1-13909 chr1 22179575 22179785 + 5.54 0.000 Intergenic L2|LINE|L2 -36583 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr15-2120 chr15 70646894 70647104 + 5.54 0.000 Intergenic Intergenic 11750 NR_126482 104548973 NR_126482 ENSG00000280515 SALRNA2 SAL-RNA2|XLOC_025931 senescence associated long non-coding RNA 2 ncRNA chr15-2542 chr15 43785000 43785210 + 5.54 0.000 intron (NM_001199877, intron 1 of 4) AluSx1|SINE|Alu -6871 NR_037672 10169 Hs.424126 NM_005770 ENSG00000140264 SERF2 4F5REL|FAM2C|H4F5REL|HsT17089 small EDRK-rich factor 2 protein-coding chr3-8565 chr3 152393386 152393596 + 5.54 0.000 intron (NM_001314057, intron 2 of 11) intron (NM_001314057, intron 2 of 11) -52501 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr5-4155 chr5 95348295 95348505 + 5.54 0.000 Intergenic Intergenic -42966 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr15-2963 chr15 50172841 50173051 + 5.54 0.000 Intergenic SVA_B|Retroposon|SVA -9250 NM_001159629 11001 Hs.11729 NM_003645 ENSG00000140284 SLC27A2 ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1 solute carrier family 27 member 2 protein-coding chr6-5561 chr6 1407722 1407932 + 5.54 0.000 Intergenic Intergenic -17416 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr20-3765 chr20 20184685 20184895 + 5.54 0.000 intron (NM_015585, intron 13 of 26) intron (NM_015585, intron 13 of 26) 128144 NM_001167816 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr9-7989 chr9 93318761 93318971 + 5.54 0.000 3' UTR (NM_001282394, exon 30 of 30) 3' UTR (NM_001282394, exon 30 of 30) 27437 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr1-5842 chr1 235218742 235218952 + 5.54 0.000 intron (NR_135074, intron 16 of 24) intron (NR_135074, intron 16 of 24) -28731 NR_039908 100616224 NR_039908 ENSG00000263439 MIR4753 mir-4753 microRNA 4753 ncRNA chr12-5116 chr12 96895515 96895725 + 5.54 0.000 Intergenic AluYk3|SINE|Alu -11637 NM_152905 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 NEDD1 gamma-tubulin ring complex targeting factor protein-coding chr4-7552 chr4 77497560 77497770 + 5.54 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -14088 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr7-9176 chr7 115120334 115120544 + 5.54 0.000 intron (NR_120521, intron 2 of 3) intron (NR_120521, intron 2 of 3) 41481 NR_120521 102724386 Hs.352357 NR_120521 ENSG00000225535 LINC01393 - long intergenic non-protein coding RNA 1393 ncRNA chr7-6593 chr7 88045641 88045851 + 5.54 0.000 intron (NM_001324421, intron 3 of 28) L1MA8|LINE|L1 111495 NM_001324421 53616 Hs.256398 NM_004194 ENSG00000008277 ADAM22 ADAM 22|EIEE61|MDC2 ADAM metallopeptidase domain 22 protein-coding chr6-8284 chr6 142520820 142521030 + 5.54 0.000 Intergenic L1MEd|LINE|L1 116911 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr13-2763 chr13 98771818 98772028 + 5.54 0.000 Intergenic Intergenic -19251 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chrX-4479 chrX 63604996 63605206 + 5.54 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -44006 NR_152610 92249 Hs.31532 NR_015353 ENSG00000235437 LINC01278 - long intergenic non-protein coding RNA 1278 ncRNA chr11-10432 chr11 116233914 116234124 + 5.54 0.000 Intergenic Intergenic -405403 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr11-8406 chr11 97208538 97208748 + 5.54 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 700218 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chrX-4739 chrX 92750565 92750775 + 5.54 0.000 Intergenic L1PREC2|LINE|L1 74233 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr5-5905 chr5 38538425 38538635 + 5.54 0.000 intron (NM_002310, intron 1 of 19) intron (NM_002310, intron 1 of 19) 18116 NM_001127671 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS LIF receptor subunit alpha protein-coding chr11-4970 chr11 69035595 69035805 + 5.54 0.000 Intergenic Intergenic -13232 NM_139075 219931 Hs.131851 NM_139075 ENSG00000162341 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding chr4-5444 chr4 24643563 24643773 + 5.54 0.000 Intergenic Intergenic -59114 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr20-1352 chr20 31761105 31761315 + 5.54 0.000 intron (NM_012112, intron 4 of 17) AluSg|SINE|Alu 21920 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr1-14863 chr1 79397208 79397418 + 5.54 0.000 Intergenic MSTA|LTR|ERVL-MaLR -390583 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr5-5858 chr5 181198133 181198343 + 5.54 0.000 intron (NM_203293, intron 5 of 6) intron (NM_203293, intron 5 of 6) 2692 NM_203297 81786 Hs.487412 NM_033342 ENSG00000146054 TRIM7 GNIP|RNF90 tripartite motif containing 7 protein-coding chr11-9771 chr11 69449265 69449475 + 5.54 0.000 Intergenic Intergenic 23715 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr19-4519 chr19 7850538 7850748 + 5.54 0.000 intron (NM_001159944, intron 6 of 19) intron (NM_001159944, intron 6 of 19) 20425 NM_145245 115704 Hs.26870 NM_145245 ENSG00000142459 EVI5L - ecotropic viral integration site 5 like protein-coding chr20-2869 chr20 62564547 62564757 + 5.54 0.000 promoter-TSS (NR_029676) promoter-TSS (NR_029676) -260 NR_029676 406923 NR_029676 ENSG00000284508 MIR133A2 MIRN133A2|mir-133a-2 microRNA 133a-2 ncRNA chr18-3438 chr18 65218223 65218433 + 5.54 0.000 Intergenic Intergenic -531924 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr16-4372 chr16 48385390 48385600 + 5.54 0.000 promoter-TSS (NM_003031) promoter-TSS (NM_003031) -82 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr3-10414 chr3 130591833 130592043 + 5.54 0.000 intron (NM_001102608, intron 12 of 35) intron (NM_001102608, intron 12 of 35) 31604 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr12-7423 chr12 59543146 59543356 + 5.54 0.000 Intergenic SATR1|Satellite|Satellite -52778 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr11-9066 chr11 29925265 29925475 + 5.54 0.000 Intergenic Intergenic 57023 NR_132652 106456574 Hs.128812 NR_132652 ENSG00000261340 LINC01616 n341006 long intergenic non-protein coding RNA 1616 ncRNA chr1-2885 chr1 247093678 247093888 + 5.54 0.000 Intergenic AluSx3|SINE|Alu 10589 NM_001142572 79862 Hs.163754 NM_024804 ENSG00000188295 ZNF669 - zinc finger protein 669 protein-coding chr21-939 chr21 41689221 41689431 + 5.54 0.000 intron (NR_024367, intron 2 of 2) CpG 10024 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr7-5966 chr7 101066841 101067051 + 5.54 0.000 Intergenic L4_B_Mam|LINE|RTE-X -18535 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding chr2-11870 chr2 22846958 22847168 + 5.54 0.000 Intergenic Intergenic 310584 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr5-6848 chr5 116701691 116701901 + 5.54 0.000 Intergenic Intergenic 60413 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr10-7793 chr10 36469723 36469933 + 5.54 0.000 Intergenic Intergenic -656029 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr4-7348 chr4 57283042 57283252 + 5.54 0.000 Intergenic Intergenic -142725 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr13-2182 chr13 19170229 19170439 + 5.54 0.000 Intergenic Intergenic 11490 NM_006001 7278 Hs.349695 NM_006001 ENSG00000198033 TUBA3C TUBA2|bA408E5.3 tubulin alpha 3c protein-coding chr9-7232 chr9 1959226 1959436 + 5.54 0.000 Intergenic MER91A|DNA|hAT-Tip100 -56016 NM_001289397 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr10-2784 chr10 128126295 128126505 + 5.54 0.000 promoter-TSS (NM_002417) promoter-TSS (NM_002417) 23 NM_001145966 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chr7-6272 chr7 136018679 136018889 + 5.54 0.000 Intergenic AluYk4|SINE|Alu -41425 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr2-10720 chr2 29255050 29255260 + 5.54 0.000 intron (NM_004304, intron 11 of 28) X7C_LINE|LINE|CR1 -31255 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr8-5936 chr8 19134788 19134998 + 5.54 0.000 Intergenic Intergenic 110629 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr6-7357 chr6 47857417 47857627 + 5.54 0.000 Intergenic Intergenic 70454 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr3-9134 chr3 31320788 31320998 + 5.54 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -159106 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr19-6600 chr19 28508609 28508819 + 5.54 0.000 intron (NR_110759, intron 5 of 9) L2a|LINE|L2 -97974 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr13-2522 chr13 60189238 60189448 + 5.54 0.000 Intergenic Intergenic -25358 NM_001258369 81624 Hs.283127 NM_030932 ENSG00000139734 DIAPH3 AN|AUNA1|DIA2|DRF3|NSDAN|diap3|mDia2 diaphanous related formin 3 protein-coding chr10-8578 chr10 95864404 95864614 + 5.54 0.000 intron (NM_001098175, intron 8 of 9) intron (NM_001098175, intron 8 of 9) -43456 NM_001130446 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr4-5981 chr4 181534941 181535151 + 5.54 0.000 Intergenic LTR78B|LTR|ERV1 -270017 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr9-5302 chr9 85577324 85577534 + 5.54 0.000 intron (NM_015239, intron 24 of 25) intron (NM_015239, intron 24 of 25) 164600 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr9-7105 chr9 129892276 129892486 + 5.54 0.000 intron (NM_015033, intron 16 of 16) (AC)n|Simple_repeat|Simple_repeat 22776 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr1-16401 chr1 224156217 224156427 + 5.54 0.000 intron (NR_049764, intron 3 of 3) intron (NR_049764, intron 3 of 3) -26918 NM_003676 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|HLD18|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr1-15928 chr1 186531917 186532127 + 5.54 0.000 Intergenic L1PA11|LINE|L1 -70908 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding chr14-1711 chr14 21656069 21656279 + 5.54 0.000 Intergenic A-rich|Low_complexity|Low_complexity -8909 NM_001001912 26686 Hs.547982 NM_001001912 ENSG00000221977 OR4E2 OR14-42 olfactory receptor family 4 subfamily E member 2 protein-coding chr4-4687 chr4 86195748 86195958 + 5.54 0.000 intron (NM_001363657, intron 2 of 13) L1PA7|LINE|L1 76047 NR_110879 101929064 Hs.662221 NR_110879 ENSG00000250062 LOC101929064 - uncharacterized LOC101929064 ncRNA chr17-5609 chr17 48529448 48529658 + 5.54 0.000 exon (NM_002144, exon 2 of 2) exon (NM_002144, exon 2 of 2) 1458 NM_002144 3211 Hs.99992 NM_002144 ENSG00000120094 HOXB1 HCFP3|HOX2|HOX2I|Hox-2.9 homeobox B1 protein-coding chr12-5129 chr12 98669855 98670065 + 5.54 0.000 intron (NM_001160, intron 10 of 25) intron (NM_001160, intron 10 of 25) 24660 NM_181869 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr6-6677 chr6 165837546 165837756 + 5.54 0.000 Intergenic Intergenic -149900 NR_027284 441177 Hs.708964 NM_001013720 ENSG00000281832 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA chr7-5578 chr7 47698468 47698678 + 5.54 0.000 Intergenic Intergenic 43329 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr17-8234 chr17 65200956 65201166 + 5.54 0.000 intron (NM_003835, intron 13 of 18) intron (NM_003835, intron 13 of 18) 63691 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chrX-3621 chrX 86727702 86727912 + 5.54 0.000 intron (NM_001139515, intron 6 of 11) MSTB|LTR|ERVL-MaLR 464839 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr16-6043 chr16 10557252 10557462 + 5.54 0.000 intron (NM_001424, intron 1 of 4) AluSz6|SINE|Alu 23241 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr11-9709 chr11 67898153 67898363 + 5.54 0.000 Intergenic AluSc|SINE|Alu -92922 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chrX-2305 chrX 54024471 54024681 + 5.54 0.000 intron (NM_001184898, intron 2 of 21) L2|LINE|L2 18571 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr1-7917 chr1 157417655 157417865 + 5.54 0.000 Intergenic Intergenic 134755 NM_001195388 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr22-3538 chr22 11974132 11974342 + 5.54 0.000 Intergenic CpG 76831 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr14-5229 chr14 98322114 98322324 + 5.54 0.000 Intergenic Intergenic -344095 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr2-10093 chr2 54294718 54294928 + 5.54 0.000 intron (NM_001320589, intron 4 of 4) AluJr|SINE|Alu -36061 NM_001369403 129852 Hs.732626 NM_173486 ENSG00000177994 C2orf73 - chromosome 2 open reading frame 73 protein-coding chr2-9909 chr2 231901738 231901948 + 5.54 0.000 Intergenic AluSz6|SINE|Alu -9545 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr1-14641 chr1 57576994 57577204 + 5.54 0.000 intron (NM_001353980, intron 4 of 5) intron (NM_001353980, intron 4 of 5) -152178 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr20-3460 chr20 52698012 52698222 + 5.54 0.000 Intergenic AluSc|SINE|Alu 77279 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA chr6-3843 chr6 41492309 41492519 + 5.54 0.000 Intergenic Intergenic -10030 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr12-7624 chr12 79844737 79844947 + 5.54 0.000 intron (NM_001244990, intron 4 of 24) L2a|LINE|L2 69069 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr7-2557 chr7 101276123 101276333 + 5.54 0.000 Intergenic AluSg4|SINE|Alu -23385 NR_146480 101927721 Hs.148659 NR_146480 ENSG00000232301 LNCPRESS1 - lncRNA p53 regulated and ESC associated 1 ncRNA chr9-8284 chr9 112918643 112918853 + 5.54 0.000 Intergenic L1MD1|LINE|L1 -27872 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr18-2576 chr18 9960187 9960397 + 5.54 0.000 TTS (NM_003574) TTS (NM_003574) 46276 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr14-3597 chr14 41288379 41288589 + 5.54 0.000 Intergenic L1PA15|LINE|L1 -318372 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr12-8023 chr12 113162411 113162621 + 5.54 0.000 intron (NM_001111322, intron 17 of 19) intron (NM_001111322, intron 17 of 19) -3339 NR_106956 102466222 NR_106956 ENSG00000276908 MIR7106 hsa-mir-7106 microRNA 7106 ncRNA chr1-11772 chr1 22182579 22182789 + 5.54 0.000 Intergenic MIRb|SINE|MIR -39587 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr17-3504 chr17 54778229 54778439 + 5.54 0.000 Intergenic Intergenic -122357 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr12-7329 chr12 55120393 55120603 + 5.54 0.000 Intergenic Intergenic -9271 NM_001005243 441639 Hs.553827 NM_001005243 ENSG00000170605 OR9K2 OR12-2 olfactory receptor family 9 subfamily K member 2 protein-coding chrX-4299 chrX 43468198 43468408 + 5.54 0.000 Intergenic LTR28|LTR|ERV1 -186604 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr7-5612 chr7 51938389 51938599 + 5.54 0.000 Intergenic L1MA8|LINE|L1 -545238 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr12-8270 chr12 125173322 125173532 + 5.54 0.000 Intergenic Intergenic -12959 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr8-3132 chr8 66829978 66830188 + 5.54 0.000 intron (NM_001204173, intron 9 of 18) AluSx1|SINE|Alu -40688 NM_001136161 157777 Hs.437006 NM_173518 ENSG00000178460 MCMDC2 C8orf45 minichromosome maintenance domain containing 2 protein-coding chr3-8816 chr3 7695992 7696202 + 5.54 0.000 intron (NM_181874, intron 10 of 10) intron (NM_181874, intron 10 of 10) -160813 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr10-7070 chr10 88063379 88063589 + 5.54 0.000 Intergenic MIR|SINE|MIR 199859 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr3-10339 chr3 127419274 127419484 + 5.54 0.000 Intergenic (CACACT)n|Simple_repeat|Simple_repeat -28709 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr11-10132 chr11 88984316 88984526 + 5.54 0.000 intron (NM_001143831, intron 1 of 8) Tigger3b|DNA|TcMar-Tigger 63651 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr5-7132 chr5 969059 969269 + 5.54 0.000 Intergenic L1MEg|LINE|L1 28176 NR_104615 100506688 Hs.532063 NM_001242737 ENSG00000215246 LOC100506688 - uncharacterized LOC100506688 ncRNA chr9-6799 chr9 34915877 34916087 + 5.54 0.000 Intergenic THE1C|LTR|ERVL-MaLR -20218 NM_001309426 100129969 Hs.571602 NM_001309426 ENSG00000187791 FAM205C FAM205CP family with sequence similarity 205 member C protein-coding chr17-6473 chr17 18962090 18962300 + 5.54 0.000 intron (NM_001270648, intron 5 of 13) L2c|LINE|L2 10030 NM_152351 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr21-1580 chr21 15094053 15094263 + 5.54 0.000 Intergenic Intergenic -29158 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr1-12436 chr1 12779637 12779847 + 5.54 0.000 Intergenic PRIMA4-int|LTR|ERV1 4894 NM_001080830 390999 Hs.156406 NM_001080830 ENSG00000116726 PRAMEF12 - PRAME family member 12 protein-coding chr10-4294 chr10 13380433 13380643 + 5.54 0.000 Intergenic Intergenic -32240 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chrX-4609 chrX 74373327 74373537 + 5.54 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -48061 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chrX-3039 chrX 94146561 94146771 + 5.54 0.000 Intergenic AluSg|SINE|Alu 472460 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr1-14782 chr1 70248030 70248240 + 5.54 0.000 intron (NR_146810, intron 10 of 12) L1MB8|LINE|L1 26755 NM_001350614 9295 Hs.479693 NM_004768 ENSG00000116754 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine and arginine rich splicing factor 11 protein-coding chr19-5809 chr19 38091608 38091818 + 5.54 0.000 intron (NM_015073, intron 4 of 21) intron (NM_015073, intron 4 of 21) -71383 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr10-6878 chr10 32191109 32191319 + 5.54 0.000 Intergenic Intergenic -134789 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr5-2743 chr5 137140575 137140785 + 5.54 0.000 exon (NM_004598, exon 4 of 11) exon (NM_004598, exon 4 of 11) 12483 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr9-8350 chr9 116777140 116777350 + 5.54 0.000 intron (NM_014010, intron 12 of 21) intron (NM_014010, intron 12 of 21) 89940 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr10-6852 chr10 26214768 26214978 + 5.54 0.000 Intergenic Intergenic -1434 NM_000818 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr7-4874 chr7 109645102 109645312 + 5.54 0.000 Intergenic HERVH-int|LTR|ERV1 315006 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr9-4243 chr9 89637163 89637373 + 5.54 0.000 Intergenic Intergenic -2515 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr3-6688 chr3 131804558 131804768 + 5.54 0.000 intron (NM_130808, intron 2 of 15) MLT1H|LTR|ERVL-MaLR 181268 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr13-3291 chr13 47664668 47664878 + 5.54 0.000 Intergenic Intergenic 267849 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr15-4992 chr15 80179033 80179243 + 5.54 0.000 intron (NM_000137, intron 11 of 13) L1ME3A|LINE|L1 26139 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr22-3730 chr22 25937405 25937615 + 5.54 0.000 intron (NM_001318245, intron 34 of 43) intron (NM_001318245, intron 34 of 43) 195322 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr1-9246 chr1 24061223 24061433 + 5.54 0.000 intron (NM_152372, intron 33 of 36) intron (NM_152372, intron 33 of 36) 50807 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr10-2937 chr10 17610875 17611085 + 5.54 0.000 intron (NM_014241, intron 1 of 6) intron (NM_014241, intron 1 of 6) 6394 NM_014241 9200 Hs.114062 NM_014241 ENSG00000165996 HACD1 CAP|PTPLA 3-hydroxyacyl-CoA dehydratase 1 protein-coding chr11-8813 chr11 11635051 11635261 + 5.54 0.000 Intergenic Intergenic -13151 NM_001363464 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr8-7052 chr8 114152370 114152580 + 5.54 0.000 Intergenic MLT2A2|LTR|ERVL -715536 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr14-5098 chr14 87797066 87797276 + 5.54 0.000 Intergenic Intergenic -141877 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr21-715 chr21 33578149 33578359 + 5.54 0.000 TTS (NM_138927) TTS (NM_138927) 10430 NM_017613 29980 Hs.436341 NM_017613 ENSG00000159147 DONSON B17|C21orf60|MIMIS|MISSLA downstream neighbor of SON protein-coding chr1-10182 chr1 110698012 110698222 + 5.54 0.000 Intergenic Intergenic -23177 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding chr10-8973 chr10 119301014 119301224 + 5.54 0.000 intron (NM_005308, intron 1 of 15) AluSx1|SINE|Alu -76853 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr17-7524 chr17 17641959 17642169 + 5.54 0.000 Intergenic Intergenic 35624 NR_131243 105371564 Hs.369680 NR_131243 ENSG00000223979 SMCR2 TCONS_00025215 Smith-Magenis syndrome chromosome region, candidate 2 ncRNA chr8-5505 chr8 58991217 58991427 + 5.54 0.000 intron (NM_014729, intron 1 of 8) intron (NM_014729, intron 1 of 8) 127825 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr15-3882 chr15 93492083 93492293 + 5.54 0.000 Intergenic Intergenic 286122 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr11-9936 chr11 76223140 76223350 + 5.54 0.000 Intergenic L1MB5|LINE|L1 -16743 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr10-7618 chr10 21756602 21756812 + 5.54 0.000 exon (NM_022365, exon 12 of 12) exon (NM_022365, exon 12 of 12) 222535 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr9-6789 chr9 32339084 32339294 + 5.54 0.000 Intergenic MLT2B3|LTR|ERVL -45414 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr4-7556 chr4 78079768 78079978 + 5.54 0.000 intron (NM_001166133, intron 2 of 41) intron (NM_001166133, intron 2 of 41) 22303 NM_001166133 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr20-4152 chr20 44141783 44141993 + 5.54 0.000 intron (NM_020433, intron 2 of 5) L3|LINE|CR1 45300 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr5-3678 chr5 175543994 175544204 + 5.54 0.000 Intergenic AluSx1|SINE|Alu 65539 NM_022754 94081 Hs.369440 NM_022754 ENSG00000164466 SFXN1 SLC56A1|TCC sideroflexin 1 protein-coding chr17-8372 chr17 74622134 74622344 + 5.54 0.000 intron (NM_181449, intron 1 of 3) intron (NM_181449, intron 1 of 3) 1499 NM_181449 342510 Hs.158954 NM_181449 ENSG00000186407 CD300E CD300LE|CLM-2|CLM2|CMRF35-A5|IREM-2|IREM2|PIgR-2|PIgR2 CD300e molecule protein-coding chr6-5956 chr6 79644987 79645197 + 5.54 0.000 intron (NM_031469, intron 1 of 3) AluSx1|SINE|Alu 13763 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chr9-6907 chr9 91656726 91656936 + 5.54 0.000 Intergenic Intergenic -20486 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr9-7729 chr9 73964917 73965127 + 5.54 0.000 Intergenic ERVL-B4-int|LTR|ERVL -406509 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr5-6928 chr5 137714902 137715112 + 5.54 0.000 intron (NM_017415, intron 2 of 14) intron (NM_017415, intron 2 of 14) 6303 NM_001257194 26249 Hs.655084 NM_017415 ENSG00000146021 KLHL3 PHA2D kelch like family member 3 protein-coding chr16-6737 chr16 74637762 74637972 + 5.54 0.000 exon (NM_018124, exon 7 of 13) exon (NM_018124, exon 7 of 13) 29010 NM_001370537 55159 Hs.567525 NM_018124 ENSG00000168411 RFWD3 FANCW|RNF201 ring finger and WD repeat domain 3 protein-coding chr6-6487 chr6 114237130 114237340 + 5.54 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -174358 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr16-2128 chr16 10363542 10363752 + 5.54 0.000 Intergenic AluSx|SINE|Alu -22414 NR_045815 80063 Hs.513343 NM_024997 ENSG00000166669 ATF7IP2 MCAF2 activating transcription factor 7 interacting protein 2 protein-coding chr22-2244 chr22 26610522 26610732 + 5.54 0.000 intron (NM_001887, intron 3 of 5) intron (NM_001887, intron 3 of 5) 7400 NM_001887 1414 Hs.37135 NM_001887 ENSG00000100122 CRYBB1 CATCN3|CTRCT17 crystallin beta B1 protein-coding chr12-8018 chr12 112970053 112970263 + 5.54 0.000 3' UTR (NM_006187, exon 16 of 16) 3' UTR (NM_006187, exon 16 of 16) -8361 NM_001032731 4939 Hs.414332 NM_002535 ENSG00000111335 OAS2 - 2'-5'-oligoadenylate synthetase 2 protein-coding chr7-7184 chr7 8128031 8128241 + 5.54 0.000 exon (NM_001350821, exon 13 of 14) exon (NM_001350821, exon 13 of 14) 133916 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr16-4985 chr16 8878054 8878264 + 5.54 0.000 Intergenic Intergenic -9147 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr9-7654 chr9 68647746 68647956 + 5.54 0.000 Intergenic L2c|LINE|L2 -57389 NM_003558 8395 Hs.534371 NM_003558 ENSG00000107242 PIP5K1B MSS4|STM7 phosphatidylinositol-4-phosphate 5-kinase type 1 beta protein-coding chr22-2588 chr22 29694698 29694908 + 5.54 0.000 non-coding (NR_156186, exon 17 of 17) non-coding (NR_156186, exon 17 of 17) -25200 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr9-6736 chr9 14021775 14021985 + 5.54 0.000 Intergenic Intergenic 93909 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr17-7813 chr17 40402846 40403056 + 5.54 0.000 exon (NM_001067, exon 20 of 35) exon (NM_001067, exon 20 of 35) 14945 NM_001067 7153 Hs.156346 NM_001067 ENSG00000131747 TOP2A TOP2|TP2A DNA topoisomerase II alpha protein-coding chr19-5799 chr19 35618817 35619027 + 5.54 0.000 exon (NM_015302, exon 13 of 19) exon (NM_015302, exon 13 of 19) 6187 NM_015302 23354 Hs.7426 NM_015302 ENSG00000249115 HAUS5 KIAA0841|dgt5 HAUS augmin like complex subunit 5 protein-coding chr8-5905 chr8 17383833 17384043 + 5.54 0.000 intron (NM_004686, intron 1 of 13) intron (NM_004686, intron 1 of 13) 29413 NM_004686 9108 Hs.625674 NM_004686 ENSG00000003987 MTMR7 - myotubularin related protein 7 protein-coding chr2-6286 chr2 55500205 55500415 + 5.54 0.000 Intergenic MamRep38|DNA|hAT -19285 NM_001282761 112942 Hs.264208 NM_080667 ENSG00000163001 CFAP36 BARTL1|CCDC104 cilia and flagella associated protein 36 protein-coding chr2-9688 chr2 43220194 43220404 + 5.54 0.000 Intergenic Intergenic 6307 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein like 2 protein-coding chr3-10731 chr3 155195065 155195275 + 5.54 0.000 Intergenic Intergenic -45775 NR_125399 101928190 Hs.121410 NR_125399 ENSG00000241336 LINC01487 - long intergenic non-protein coding RNA 1487 ncRNA chr11-9298 chr11 45354296 45354506 + 5.54 0.000 promoter-TSS (NR_120558) promoter-TSS (NR_120558) -970 NR_120558 101928812 Hs.444059 NR_120557 ENSG00000254427 LINC02696 - long intergenic non-protein coding RNA 2696 ncRNA chr8-6512 chr8 66064928 66065138 + 5.54 0.000 intron (NR_146171, intron 4 of 6) intron (NR_146171, intron 4 of 6) 43480 NM_033105 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr9-7305 chr9 10128784 10128994 + 5.54 0.000 intron (NM_002839, intron 3 of 45) intron (NM_002839, intron 3 of 45) 329497 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr1-12796 chr1 82646462 82646672 + 5.54 0.000 Intergenic LTR33A_|LTR|ERVL -256616 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr15-5201 chr15 94387815 94388025 + 5.54 0.000 intron (NM_018349, intron 13 of 21) L2a|LINE|L2 31990 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr18-2942 chr18 13871523 13871733 + 5.54 0.000 Intergenic Intergenic 43908 NM_000529 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding chr1-13955 chr1 24409506 24409716 + 5.54 0.000 intron (NM_001199012, intron 1 of 8) MER44C|DNA|TcMar-Tigger -3876 NM_001322854 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr11-5083 chr11 115101926 115102136 + 5.54 0.000 Intergenic AluYc|SINE|Alu -231546 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr4-3841 chr4 124973719 124973929 + 5.54 0.000 Intergenic Intergenic -261092 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr15-4102 chr15 76332540 76332750 + 5.54 0.000 Intergenic Intergenic -4128 NM_145805 64843 Hs.444677 NM_145805 ENSG00000159556 ISL2 - ISL LIM homeobox 2 protein-coding chr14-4958 chr14 74627885 74628095 + 5.54 0.000 Intergenic Intergenic -15753 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr6-8576 chr6 164567643 164567853 + 5.54 0.000 Intergenic MER57B2|LTR|ERV1 254315 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr2-10540 chr2 236173627 236173837 + 5.54 0.000 Intergenic CpG -5346 NM_001485 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr16-6801 chr16 79504353 79504563 + 5.54 0.000 Intergenic MIRb|SINE|MIR 96279 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr19-5180 chr19 11002615 11002825 + 5.54 0.000 intron (NM_001128845, intron 10 of 32) AluSx1|SINE|Alu 18568 NM_001128848 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr15-3538 chr15 101139602 101139812 + 5.54 0.000 Intergenic Intergenic 112341 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr7-5951 chr7 100490876 100491086 + 5.54 0.000 intron (NM_173564, intron 5 of 6) (CCTCACT)n|Simple_repeat|Simple_repeat 7054 NM_173564 222950 Hs.320086 NM_173564 ENSG00000166924 NYAP1 C7orf51 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 protein-coding chr10-9096 chr10 126333184 126333394 + 5.54 0.000 intron (NM_001288974, intron 1 of 18) intron (NM_001288974, intron 1 of 18) 55188 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr19-5274 chr19 49556677 49556887 + 5.54 0.000 intron (NM_001363649, intron 7 of 9) CpG-14929 23774 NM_001363649 51070 Hs.7236 NM_015953 ENSG00000142546 NOSIP CGI-25 nitric oxide synthase interacting protein protein-coding chr15-2248 chr15 35106100 35106310 + 5.54 0.000 Intergenic Intergenic -20797 NM_001355281 388112 Hs.635882 NM_001355281 ENSG00000255192 NANOGP8 NANOGP1|PN8 Nanog homeobox retrogene P8 protein-coding chr4-4756 chr4 98055954 98056164 + 5.54 0.000 intron (NM_174952, intron 5 of 10) L1PA14|LINE|L1 87417 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr20-3227 chr20 62029351 62029561 + 5.54 0.000 intron (NM_003185, intron 1 of 14) intron (NM_003185, intron 1 of 14) -35346 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr14-4312 chr14 21791638 21791848 + 5.54 0.000 Intergenic Intergenic -120726 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding chr3-2559 chr3 72171672 72171882 + 5.54 0.000 intron (NR_038221, intron 2 of 2) intron (NR_038221, intron 2 of 2) 20520 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr2-13502 chr2 149735419 149735629 + 5.54 0.000 intron (NR_110240, intron 1 of 2) intron (NR_110240, intron 1 of 2) 123667 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr3-9193 chr3 36096634 36096844 + 5.54 0.000 Intergenic Intergenic -283748 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr6-8354 chr6 148557887 148558097 + 5.54 0.000 Intergenic L2a|LINE|L2 48841 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr20-3625 chr20 7442980 7443190 + 5.54 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger 71477 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chrX-3228 chrX 64513583 64513793 + 5.54 0.000 Intergenic L1P1|LINE|L1 -118236 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr6-7325 chr6 45625489 45625699 + 5.54 0.000 Intergenic MamTip2|DNA|hAT-Tip100 203319 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr10-6543 chr10 71279356 71279566 + 5.54 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -39792 NM_001363518 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr9-3611 chr9 87436977 87437187 + 5.54 0.000 Intergenic ERVL-E-int|LTR|ERVL -60146 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr4-3005 chr4 124409008 124409218 + 5.54 0.000 Intergenic Intergenic 149321 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr10-6290 chr10 98470628 98470838 + 5.54 0.000 intron (NM_001166246, intron 11 of 12) intron (NM_001166246, intron 11 of 12) -23770 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr6-3680 chr6 153511457 153511667 + 5.54 0.000 Intergenic AluSx|SINE|Alu -380280 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr3-9168 chr3 33826201 33826411 + 5.54 0.000 intron (NM_001256192, intron 5 of 5) L1MB7|LINE|L1 27676 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr11-10736 chr11 132414564 132414774 + 5.54 0.000 TTS (NM_001012393) TTS (NM_001012393) 130367 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chrX-5208 chrX 134839350 134839560 + 5.54 0.000 non-coding (NR_158606, exon 5 of 12) non-coding (NR_158606, exon 5 of 12) 32218 NM_001170783 159091 Hs.269127 NM_138819 ENSG00000156500 FAM122C - family with sequence similarity 122C protein-coding chr8-5951 chr8 20221806 20222016 + 5.54 0.000 TTS (NM_001693) TTS (NM_001693) 24530 NM_001693 526 Hs.295917 NM_001693 ENSG00000147416 ATP6V1B2 ATP6B1B2|ATP6B2|DOOD|HO57|VATB|VPP3|Vma2|ZLS2 ATPase H+ transporting V1 subunit B2 protein-coding chr3-8119 chr3 20991045 20991255 + 5.54 0.000 Intergenic PABL_A|LTR|ERV1 -414576 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr8-7200 chr8 125596706 125596916 + 5.54 0.000 Intergenic LTR33|LTR|ERVL 164602 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr16-5764 chr16 87473166 87473376 + 5.54 0.000 intron (NM_015144, intron 1 of 12) AluSq2|SINE|Alu 18583 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr15-4344 chr15 40598987 40599197 + 5.54 0.000 intron (NM_144508, intron 1 of 25) AluJb|SINE|Alu 4843 NM_144508 57082 Hs.181855 NM_144508 ENSG00000137812 KNL1 AF15Q14|CASC5|CT29|D40|MCPH4|PPP1R55|Spc7|hKNL-1|hSpc105 kinetochore scaffold 1 protein-coding chr12-7976 chr12 110846926 110847136 + 5.54 0.000 promoter-TSS (NM_001286243) promoter-TSS (NM_001286243) 44 NM_001286243 160762 Hs.437141 NM_152591 ENSG00000173093 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding chr20-2750 chr20 50740874 50741084 + 5.54 0.000 intron (NM_032521, intron 2 of 2) AluSx|SINE|Alu 9399 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr2-9802 chr2 130252907 130253117 + 5.54 0.000 Intergenic CpG -54573 NM_207312 112714 Hs.433336 NM_207312 ENSG00000152086 TUBA3E - tubulin alpha 3e protein-coding chr7-8557 chr7 57236886 57237096 + 5.54 0.000 Intergenic L2a|LINE|L2 -14817 NR_136269 105375297 Hs.586309 NR_136269 ENSG00000234089 LOC105375297 - uncharacterized LOC105375297 ncRNA chr17-7950 chr17 47393086 47393296 + 5.54 0.000 intron (NM_001195192, intron 13 of 21) AluJr|SINE|Alu 69236 NM_152347 124989 Hs.463303 NM_152347 ENSG00000178852 EFCAB13 C17orf57 EF-hand calcium binding domain 13 protein-coding chr3-10586 chr3 142603916 142604126 + 5.54 0.000 intron (NM_001145319, intron 1 of 15) intron (NM_001145319, intron 1 of 15) 7628 NM_001145319 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr15-1819 chr15 38360753 38360963 + 5.54 0.000 Intergenic AluY|SINE|Alu -93269 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr1-12685 chr1 48540134 48540344 + 5.54 0.000 intron (NM_001323575, intron 11 of 12) intron (NM_001323575, intron 11 of 12) -68031 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr1-7046 chr1 178665806 178666016 + 5.54 0.000 Intergenic L1MC4|LINE|L1 -11838 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chr10-8951 chr10 118170963 118171173 + 5.54 0.000 intron (NR_026940, intron 3 of 3) L1MC4|LINE|L1 -124127 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr3-9103 chr3 28736243 28736453 + 5.54 0.000 intron (NR_038840, intron 2 of 4) L1PA10|LINE|L1 161070 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr7-7585 chr7 126303822 126304032 + 5.54 0.000 Intergenic MER66-int|LTR|ERV1 754257 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr18-2810 chr18 4686778 4686988 + 5.54 0.000 Intergenic HERV17-int|LTR|ERV1 -231576 NM_004746 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr1-11825 chr1 30903330 30903540 + 5.54 0.000 intron (NM_014654, intron 1 of 4) (CA)n|Simple_repeat|Simple_repeat 5323 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr20-1073 chr20 33443434 33443644 + 5.54 0.000 exon (NM_003098, exon 1 of 8) exon (NM_003098, exon 1 of 8) 353 NM_003098 6640 Hs.31121 NM_003098 ENSG00000101400 SNTA1 LQT12|SNT1|TACIP1|dJ1187J4.5 syntrophin alpha 1 protein-coding chr8-7369 chr8 137424603 137424813 + 5.54 0.000 Intergenic Intergenic -11120 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr3-9538 chr3 52555938 52556148 + 5.54 0.000 intron (NM_001350075, intron 26 of 29) intron (NM_001350075, intron 26 of 29) 19438 NM_001124767 440957 Hs.660577 NM_001124767 ENSG00000168273 SMIM4 C3orf78 small integral membrane protein 4 protein-coding chr19-6712 chr19 36772393 36772603 + 5.54 0.000 promoter-TSS (NM_001294306) promoter-TSS (NM_001294306) 309 NM_001193552 342892 Hs.406307 NM_001193552 ENSG00000267041 ZNF850 ZNF850P zinc finger protein 850 protein-coding chr5-8057 chr5 92884655 92884865 + 5.54 0.000 Intergenic Intergenic 686583 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr3-9609 chr3 56990850 56991060 + 5.54 0.000 intron (NM_001128615, intron 2 of 12) intron (NM_001128615, intron 2 of 12) 50915 NR_046572 100874200 Hs.549631 NR_046572 ENSG00000240198 ARHGEF3-AS1 - ARHGEF3 antisense RNA 1 ncRNA chr9-7563 chr9 35625153 35625363 + 5.54 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -6845 NM_001782 971 Hs.116481 NM_001782 ENSG00000137101 CD72 CD72b|LYB2 CD72 molecule protein-coding chr11-7257 chr11 15653271 15653481 + 5.54 0.000 intron (NM_001293172, intron 1 of 2) intron (NM_001293172, intron 1 of 2) 9491 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chrX-3781 chrX 133578687 133578897 + 5.54 0.000 intron (NM_001164619, intron 6 of 6) MER117|DNA|hAT-Charlie -163303 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr20-2641 chr20 43556270 43556480 + 5.54 0.000 Intergenic Intergenic -2652 NM_170693 10110 Hs.300863 NM_016276 ENSG00000101049 SGK2 H-SGK2|dJ138B7.2 serum/glucocorticoid regulated kinase 2 protein-coding chr10-6227 chr10 59606342 59606552 + 5.54 0.000 Intergenic Intergenic 103444 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr8-5465 chr8 42691237 42691447 + 5.54 0.000 Intergenic Intergenic -6024 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr3-7471 chr3 139033921 139034131 + 5.54 0.000 Intergenic MER89-int|LTR|ERV1 10866 NM_001134657 389152 Hs.531377 NM_001004315 ENSG00000233701 PRR23C - proline rich 23C protein-coding chr10-8710 chr10 102102646 102102856 + 5.54 0.000 Intergenic Intergenic 12251 NM_003893 8861 Hs.454418 NM_003893 ENSG00000198728 LDB1 CLIM-2|CLIM2|LDB-1|NLI LIM domain binding 1 protein-coding chr15-4669 chr15 65061151 65061361 + 5.54 0.000 intron (NM_001307930, intron 1 of 3) MIRb|SINE|MIR 6735 NM_001307930 51285 Hs.27018 NM_016563 ENSG00000103710 RASL12 RIS RAS like family 12 protein-coding chr2-10282 chr2 128834501 128834711 + 5.54 0.000 Intergenic Intergenic -29994 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chrX-3840 chrX 152908664 152908874 + 5.54 0.000 Intergenic Intergenic -5673 NM_001178110 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr13-3524 chr13 22908304 22908514 + 5.54 0.000 intron (NR_138043, intron 1 of 2) MLT1A1-int|LTR|ERVL-MaLR 7960 NR_138043 100996930 Hs.380803 NR_138043 LINC00621 - long intergenic non-protein coding RNA 621 ncRNA chr20-4446 chr20 62062415 62062625 + 5.54 0.000 intron (NM_003185, intron 1 of 14) intron (NM_003185, intron 1 of 14) -2282 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr11-6674 chr11 76604066 76604276 + 5.54 0.000 Intergenic Intergenic 65767 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr16-5211 chr16 22894585 22894795 + 5.54 0.000 intron (NM_006043, intron 1 of 1) AluJb|SINE|Alu 80528 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr16-5409 chr16 89522843 89523053 + 5.54 0.000 intron (NM_001363850, intron 3 of 17) intron (NM_001363850, intron 3 of 17) 14545 NM_199367 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7 matrix AAA peptidase subunit, paraplegin protein-coding chr7-9659 chr7 151472201 151472411 + 5.54 0.000 intron (NM_005614, intron 4 of 7) L2a|LINE|L2 -31493 NR_131779 155051 Hs.647104 NM_144727 ENSG00000127377 CRYGN - crystallin gamma N protein-coding chr1-16577 chr1 235783210 235783420 + 5.54 0.000 intron (NM_000081, intron 14 of 52) intron (NM_000081, intron 14 of 52) 69745 NR_031718 100302139 NR_031718 ENSG00000222831 MIR1537 MIRN1537|hsa-mir-1537|mir-1537 microRNA 1537 ncRNA chrX-4593 chrX 72422739 72422949 + 5.54 0.000 intron (NR_051952, intron 8 of 9) L1M4|LINE|L1 -115687 NM_001144886 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr19-4191 chr19 43470385 43470595 + 5.54 0.000 Intergenic Intergenic -4882 NM_014400 27076 Hs.631594 NM_014400 ENSG00000124466 LYPD3 C4.4A LY6/PLAUR domain containing 3 protein-coding chr17-3242 chr17 19547151 19547361 + 5.54 0.000 intron (NM_018242, intron 3 of 16) AluJo|SINE|Alu -10304 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr2-14756 chr2 240085032 240085242 + 5.54 0.000 Intergenic L1ME3G|LINE|L1 -39065 NM_173351 150681 Hs.626616 NM_173351 ENSG00000178586 OR6B3 OR6B3P|OR6B3Q olfactory receptor family 6 subfamily B member 3 protein-coding chr7-7828 chr7 4116682 4116892 + 5.54 0.000 intron (NM_152744, intron 25 of 44) intron (NM_152744, intron 25 of 44) -12898 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr3-10751 chr3 156210591 156210801 + 5.54 0.000 intron (NM_003471, intron 1 of 13) MIR3|SINE|MIR 17187 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr3-3701 chr3 169147566 169147776 + 5.54 0.000 promoter-TSS (NM_001164000) promoter-TSS (NM_001164000) -200 NM_001366467 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr6-5552 chr6 169420977 169421187 + 5.54 0.000 Intergenic Intergenic -166968 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr8-5401 chr8 27366559 27366769 + 5.54 0.000 intron (NM_173175, intron 1 of 29) intron (NM_173175, intron 1 of 29) 41100 NM_173175 2185 Hs.491322 NM_004103 ENSG00000120899 PTK2B CADTK|CAKB|FADK2|FAK2|PKB|PTK|PYK2|RAFTK protein tyrosine kinase 2 beta protein-coding chr14-1117 chr14 77468639 77468849 + 5.54 0.000 intron (NM_012111, intron 8 of 8) AluJb|SINE|Alu 10651 NM_012111 10598 Hs.204041 NM_012111 ENSG00000100591 AHSA1 AHA1|C14orf3|hAha1|p38 activator of HSP90 ATPase activity 1 protein-coding chr10-7017 chr10 76592445 76592655 + 5.54 0.000 Intergenic L1PB3|LINE|L1 -295494 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr2-14740 chr2 239145039 239145249 + 5.54 0.000 intron (NM_006037, intron 7 of 26) intron (NM_006037, intron 7 of 26) 50313 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr7-7512 chr7 102473535 102473745 + 5.54 0.000 TTS (NM_152892) TTS (NM_152892) 2171 NR_039677 100616367 NR_039677 ENSG00000284596 MIR4467 - microRNA 4467 ncRNA chr7-7182 chr7 7825834 7826044 + 5.54 0.000 intron (NM_001302350, intron 4 of 4) MER2|DNA|TcMar-Tigger -107332 NM_002947 6119 Hs.487540 NM_002947 ENSG00000106399 RPA3 REPA3|RP-A p14 replication protein A3 protein-coding chr15-1665 chr15 39640647 39640857 + 5.54 0.000 intron (NM_152597, intron 10 of 11) MER57A1|LTR|ERV1 59673 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr1-10286 chr1 149897197 149897407 + 5.54 0.000 Intergenic AluSp|SINE|Alu -2266 NM_001321026 51027 Hs.13880 NM_016074 ENSG00000178096 BOLA1 CGI-143 bolA family member 1 protein-coding chrX-1465 chrX 108735844 108736054 + 5.54 0.000 promoter-TSS (NR_110652) promoter-TSS (NR_110652) 428 NM_003604 8471 Hs.407141 NM_003604 ENSG00000133124 IRS4 IRS-4|PY160 insulin receptor substrate 4 protein-coding chr10-6327 chr10 117350761 117350971 + 5.54 0.000 intron (NM_173791, intron 1 of 4) AluY|SINE|Alu 24574 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr2-9630 chr2 12115601 12115811 + 5.54 0.000 intron (NR_110197, intron 3 of 3) intron (NR_110197, intron 3 of 3) -83424 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr4-7570 chr4 78953328 78953538 + 5.54 0.000 Intergenic Intergenic -13995 NM_001350105 152559 Hs.657312 NM_177453 ENSG00000163291 PAQR3 RKTG progestin and adipoQ receptor family member 3 protein-coding chr4-7176 chr4 40299870 40300080 + 5.54 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -7210 NR_121641 101060498 Hs.351492 NR_121640 ENSG00000249241 LINC02265 - long intergenic non-protein coding RNA 2265 ncRNA chr11-4982 chr11 71536249 71536459 + 5.54 0.000 Intergenic AluJb|SINE|Alu -1671 NM_021046 57830 Hs.445245 NM_021046 ENSG00000241233 KRTAP5-8 KRTAP5-2|KRTAP5.8|UHSKerB keratin associated protein 5-8 protein-coding chr6-5164 chr6 127287651 127287861 + 5.54 0.000 TTS (NM_001139510) TTS (NM_001139510) 20918 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr12-7645 chr12 82320635 82320845 + 5.54 0.000 Intergenic Intergenic 37647 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr11-4975 chr11 69377764 69377974 + 5.54 0.000 Intergenic Intergenic -47786 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr6-6089 chr6 147584257 147584467 + 5.54 0.000 Intergenic Intergenic 75672 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr4-8366 chr4 148386021 148386231 + 5.54 0.000 intron (NM_000901, intron 2 of 8) intron (NM_000901, intron 2 of 8) 56288 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr6-8336 chr6 147220448 147220658 + 5.54 0.000 intron (NM_139244, intron 2 of 25) L1MC1|LINE|L1 -15939 NR_034115 729178 Hs.557608 NR_034115 STXBP5-AS1 - STXBP5 antisense RNA 1 ncRNA chr14-4188 chr14 86640203 86640413 + 5.54 0.000 Intergenic Intergenic -265470 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr6-6037 chr6 124260341 124260551 + 5.54 0.000 intron (NM_001300737, intron 2 of 7) L2a|LINE|L2 -22559 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr3-3331 chr3 529930 530140 + 5.54 0.000 Intergenic L1M4c|LINE|L1 -62070 NR_110118 101927215 Hs.650700 NR_110118 ENSG00000224957 LINC01266 - long intergenic non-protein coding RNA 1266 ncRNA chr5-7703 chr5 57040956 57041166 + 5.54 0.000 Intergenic MER21C|LTR|ERVL -88931 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr15-4945 chr15 78260145 78260355 + 5.54 0.000 Intergenic Intergenic -3895 NM_018602 55466 Hs.513053 NM_018602 ENSG00000140403 DNAJA4 MST104|MSTP104|PRO1472 DnaJ heat shock protein family (Hsp40) member A4 protein-coding chr19-7047 chr19 51196406 51196616 + 5.54 0.000 Intergenic MER101|LTR|ERV1 10498 NR_107041 102465873 NR_107041 ENSG00000278617 MIR8074 hsa-mir-8074 microRNA 8074 ncRNA chr2-14013 chr2 191291839 191292049 + 5.54 0.000 intron (NM_012223, intron 2 of 28) intron (NM_012223, intron 2 of 28) 46540 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr2-11190 chr2 156859259 156859469 + 5.54 0.000 Intergenic Intergenic -398341 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr4-6938 chr4 17337285 17337495 + 5.54 0.000 Intergenic Intergenic -16508 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr3-6937 chr3 159726453 159726663 + 5.54 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 42054 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr11-8862 chr11 13497812 13498022 + 5.54 0.000 Intergenic AluJr|SINE|Alu -1742 NM_001316352 5741 Hs.37045 NM_000315 ENSG00000152266 PTH PTH1 parathyroid hormone protein-coding chr2-5234 chr2 46804306 46804516 + 5.54 0.000 Intergenic Intergenic -12257 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr14-4087 chr14 65361966 65362176 + 5.54 0.000 Intergenic Intergenic -26888 NR_039857 100616176 NR_039857 ENSG00000266740 MIR4708 mir-4708 microRNA 4708 ncRNA chr10-4831 chr10 12919803 12920013 + 5.54 0.000 intron (NM_001282658, intron 6 of 6) intron (NM_001282658, intron 6 of 6) 81805 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr19-6957 chr19 47570842 47571052 + 5.54 0.000 intron (NM_001277075, intron 2 of 16) AluSx3|SINE|Alu 2201 NM_001277075 84215 Hs.14161 NM_032255 ENSG00000118156 ZNF541 - zinc finger protein 541 protein-coding chr3-5880 chr3 37442355 37442565 + 5.54 0.000 Intergenic Intergenic -9681 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr13-1617 chr13 49436932 49437142 + 5.54 0.000 intron (NM_001079670, intron 1 of 10) AluJo|SINE|Alu 7027 NM_001287337 81617 Hs.87159 NM_030925 ENSG00000102547 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39 like protein-coding chr17-7247 chr17 2183818 2184028 + 5.54 0.000 intron (NM_001256827, intron 5 of 11) intron (NM_001256827, intron 5 of 11) -48755 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr8-6188 chr8 34372541 34372751 + 5.54 0.000 Intergenic Intergenic -411275 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr5-8092 chr5 96024518 96024728 + 5.54 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) -54515 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr9-4954 chr9 16191450 16191660 + 5.54 0.000 Intergenic Intergenic 61552 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr5-6573 chr5 21741077 21741287 + 5.54 0.000 Intergenic L1MC3|LINE|L1 -143272 NR_132788 106635540 NR_132788 SNORA105B - small nucleolar RNA, H/ACA box 105B snoRNA chr2-10442 chr2 206679770 206679980 + 5.54 0.000 intron (NM_001093730, intron 9 of 11) intron (NM_001093730, intron 9 of 11) 35648 NM_001102659 200726 NM_001102659 ENSG00000235118 FAM237A - family with sequence similarity 237 member A protein-coding chr15-4039 chr15 63035236 63035446 + 5.54 0.000 Intergenic Intergenic -7406 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr12-3714 chr12 7053992 7054202 + 5.54 0.000 Intergenic AluY|SINE|Alu -6621 NM_001346850 716 Hs.458355 NM_001734 ENSG00000182326 C1S EDSPD2 complement C1s protein-coding chr1-11924 chr1 58960684 58960894 + 5.54 0.000 Intergenic L1PA5|LINE|L1 -59687 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr5-3774 chr5 65182387 65182597 + 5.54 0.000 intron (NR_135689, intron 23 of 25) intron (NR_135689, intron 23 of 25) 299428 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr2-11533 chr2 240200706 240200916 + 5.54 0.000 Intergenic Intergenic -60153 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr20-4114 chr20 41607580 41607790 + 5.54 0.000 intron (NM_032221, intron 1 of 36) intron (NM_032221, intron 1 of 36) 10692 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr1-16597 chr1 236929368 236929578 + 5.54 0.000 Intergenic AluSz6|SINE|Alu 74968 NM_001276687 645745 Hs.632513 NM_001039954 ENSG00000244020 MT1HL1 MT1P2 metallothionein 1H like 1 protein-coding chr21-1854 chr21 41995072 41995282 + 5.54 0.000 intron (NM_020727, intron 1 of 1) THE1B-int|LTR|ERVL-MaLR -14017 NR_119384 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA chr2-13112 chr2 113403684 113403894 + 5.54 0.000 Intergenic MSTD|LTR|ERVL-MaLR -33902 NM_001330342 150472 Hs.531330 NM_172003 ENSG00000136682 CBWD2 - COBW domain containing 2 protein-coding chr9-6978 chr9 108810293 108810503 + 5.54 0.000 Intergenic LTR78|LTR|ERV1 45588 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr7-6623 chr7 108660833 108661043 + 5.54 0.000 Intergenic Intergenic 91064 NM_012328 4189 Hs.732494 NM_012328 ENSG00000128590 DNAJB9 ERdj4|MDG-1|MDG1|MST049|MSTP049 DnaJ heat shock protein family (Hsp40) member B9 protein-coding chr16-4169 chr16 8663696 8663906 + 5.54 0.000 Intergenic Intergenic -10816 NM_020686 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr5-4821 chr5 59993354 59993564 + 5.54 0.000 intron (NM_001165899, intron 2 of 16) L1ME4a|LINE|L1 -99733 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr8-4197 chr8 83632354 83632564 + 5.54 0.000 Intergenic Intergenic 228701 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr3-10733 chr3 155254090 155254300 + 5.54 0.000 Intergenic ERVL-B4-int|LTR|ERVL 13250 NR_125399 101928190 Hs.121410 NR_125399 ENSG00000241336 LINC01487 - long intergenic non-protein coding RNA 1487 ncRNA chr1-14913 chr1 84164203 84164413 + 5.54 0.000 promoter-TSS (NM_001242860) promoter-TSS (NM_001242860) 3 NM_001300917 5567 Hs.487325 NM_002731 ENSG00000142875 PRKACB PKA C-beta|PKACB protein kinase cAMP-activated catalytic subunit beta protein-coding KI270714.1-3 KI270714.1 30983 31193 + 5.54 0.000 NA NA NA NA chr15-3966 chr15 43635380 43635590 + 5.54 0.000 intron (NR_146339, intron 36 of 39) intron (NR_146339, intron 36 of 39) 12578 NR_110319 117155 Hs.657395 NM_054020 ENSG00000166762 CATSPER2 - cation channel sperm associated 2 protein-coding chr9-6511 chr9 104927441 104927651 + 5.54 0.000 intron (NM_005502, intron 1 of 49) intron (NM_005502, intron 1 of 49) 609 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr8-7495 chr8 142824391 142824601 + 5.54 0.000 Intergenic Intergenic -10305 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr5-6105 chr5 22975867 22976077 + 5.54 0.000 Intergenic Intergenic -122628 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr22-3898 chr22 36009003 36009213 + 5.54 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) 19429 NM_001082579 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr6-8260 chr6 138660776 138660986 + 5.54 0.000 Intergenic AluJb|SINE|Alu -30787 NR_033896 441172 Hs.92290 NR_033896 FLJ46906 - uncharacterized LOC441172 ncRNA chr4-7554 chr4 77852545 77852755 + 5.54 0.000 Intergenic Intergenic -10180 NM_020236 65008 Hs.532019 NM_020236 ENSG00000169288 MRPL1 BM022|L1MT|MRP-L1 mitochondrial ribosomal protein L1 protein-coding chr7-8029 chr7 19285367 19285577 + 5.54 0.000 Intergenic Intergenic -140051 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chr6-6733 chr6 2062980 2063190 + 5.54 0.000 intron (NM_001253846, intron 4 of 10) L2a|LINE|L2 112906 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr5-7868 chr5 73138155 73138365 + 5.54 0.000 intron (NR_134252, intron 1 of 1) intron (NR_134252, intron 1 of 1) 12332 NR_134252 105379030 NR_134252 ENSG00000251599 LOC105379030 - uncharacterized LOC105379030 ncRNA chr4-5777 chr4 74802876 74803086 + 5.54 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -8458 NM_001316963 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr22-4202 chr22 46168695 46168905 + 5.54 0.000 intron (NM_001001928, intron 2 of 7) L1MD|LINE|L1 18005 NM_001362873 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr5-8562 chr5 136225600 136225810 + 5.54 0.000 promoter-TSS (NR_133682) promoter-TSS (NR_133682) -950 NR_133682 106478968 Hs.637713 NR_133682 ENSG00000250947 TRPC7-AS2 CTB-28J9.2 TRPC7 antisense RNA 2 ncRNA chr2-13981 chr2 189832100 189832310 + 5.54 0.000 intron (NR_110332, intron 6 of 12) intron (NR_110332, intron 6 of 12) 47755 NM_001321045 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr4-4574 chr4 75206744 75206954 + 5.54 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -122141 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA chr21-1858 chr21 42124199 42124409 + 5.54 0.000 intron (NM_001004416, intron 17 of 22) intron (NM_001004416, intron 17 of 22) -15770 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr20-3763 chr20 20142308 20142518 + 5.54 0.000 intron (NM_015585, intron 8 of 26) intron (NM_015585, intron 8 of 26) 85767 NM_001167816 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr14-3855 chr14 77794303 77794513 + 5.54 0.000 Intergenic L2a|LINE|L2 -5701 NR_158988 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr14-5225 chr14 97544214 97544424 + 5.54 0.000 intron (NR_110166, intron 3 of 4) AluJb|SINE|Alu 85503 NR_110166 101929241 Hs.650839 NR_110165 ENSG00000246084 LINC02325 - long intergenic non-protein coding RNA 2325 ncRNA chr16-3551 chr16 53268879 53269089 + 5.54 0.000 intron (NM_001352157, intron 21 of 37) AluJb|SINE|Alu 60533 NM_001352158 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr9-7453 chr9 26863179 26863389 + 5.54 0.000 intron (NM_001167575, intron 4 of 5) intron (NM_001167575, intron 4 of 5) 29518 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr1-16384 chr1 222723477 222723687 + 5.54 0.000 intron (NM_144695, intron 5 of 12) intron (NM_144695, intron 5 of 12) 10261 NM_001288581 148362 Hs.534965 NM_144695 ENSG00000162819 BROX C1orf58 BRO1 domain and CAAX motif containing protein-coding chr8-5501 chr8 56511513 56511723 + 5.54 0.000 intron (NR_125813, intron 2 of 3) intron (NR_125813, intron 2 of 3) 48205 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr1-6114 chr1 155202991 155203201 + 5.54 0.000 exon (NM_001252607, exon 6 of 22) exon (NM_001252607, exon 6 of 22) 4801 NM_007112 7059 Hs.169875 NM_007112 ENSG00000169231 THBS3 TSP3 thrombospondin 3 protein-coding chr10-4388 chr10 48776205 48776415 + 5.54 0.000 intron (NM_020945, intron 15 of 61) intron (NM_020945, intron 15 of 61) 90847 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr3-7952 chr3 160010522 160010732 + 5.54 0.000 intron (NR_108088, intron 4 of 9) AluJr|SINE|Alu -10022 NR_104132 730109 Hs.99333 NR_104132 LINC01100 - long intergenic non-protein coding RNA 1100 ncRNA chr6-7509 chr6 64434034 64434244 + 5.54 0.000 intron (NM_001292009, intron 28 of 43) MLT1B|LTR|ERVL-MaLR 627303 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr10-6935 chr10 52785290 52785500 + 5.54 0.000 Intergenic Intergenic -13695 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr1-8261 chr1 34883265 34883475 + 5.54 0.000 intron (NM_001080418, intron 8 of 11) intron (NM_001080418, intron 8 of 11) -23621 NM_138428 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding chr7-5430 chr7 36610051 36610261 + 5.54 0.000 intron (NM_001177507, intron 10 of 19) intron (NM_001177507, intron 10 of 19) -10036 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr9-8378 chr9 118307012 118307222 + 5.54 0.000 Intergenic Intergenic -372554 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr1-11394 chr1 50731178 50731388 + 5.54 0.000 intron (NM_007051, intron 6 of 18) MER54B|LTR|ERVL 228984 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr6-5999 chr6 101422824 101423034 + 5.54 0.000 intron (NM_001166247, intron 1 of 16) intron (NM_001166247, intron 1 of 16) 23944 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr8-4983 chr8 135687431 135687641 + 5.54 0.000 Intergenic Intergenic 230080 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr14-5299 chr14 101066547 101066757 + 5.54 0.000 promoter-TSS (NR_030392) promoter-TSS (NR_030392) -72 NR_030392 724026 NR_030392 ENSG00000207959 MIR656 MIRN656|hsa-mir-656|mir-656 microRNA 656 ncRNA chr11-7375 chr11 73684733 73684943 + 5.54 0.000 intron (NM_001243718, intron 3 of 4) intron (NM_001243718, intron 3 of 4) 35925 NM_001130036 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr11-7955 chr11 6081898 6082108 + 5.54 0.000 Intergenic L1MA1|LINE|L1 -25681 NM_001005181 196335 Hs.632154 NM_001005181 ENSG00000180919 OR56B4 OR11-67 olfactory receptor family 56 subfamily B member 4 protein-coding chr9-5767 chr9 127599130 127599340 + 5.54 0.000 Intergenic L2b|LINE|L2 -13042 NM_003165 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr2-13289 chr2 129089893 129090103 + 5.54 0.000 Intergenic Intergenic 183893 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr4-3969 chr4 185957109 185957319 + 5.54 0.000 promoter-TSS (NM_001270771) promoter-TSS (NM_001270771) -842 NM_001270771 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr4-6886 chr4 12958379 12958589 + 5.54 0.000 Intergenic Intergenic 525856 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr18-3500 chr18 73888690 73888900 + 5.54 0.000 Intergenic Intergenic 259039 NM_152676 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr19-6750 chr19 39251316 39251526 + 5.54 0.000 Intergenic AluJb|SINE|Alu -2565 NM_001276254 101180976 Hs.745579 NM_001276254 ENSG00000272395 IFNL4 IFNAN interferon lambda 4 (gene/pseudogene) protein-coding chr9-6561 chr9 120344437 120344647 + 5.54 0.000 Intergenic LTR101_Mam|LTR|ERVL -99492 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr12-6637 chr12 492592 492802 + 5.54 0.000 intron (NM_173593, intron 1 of 19) L1MCa|LINE|L1 32758 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr5-7195 chr5 6731670 6731880 + 5.54 0.000 intron (NM_001171805, intron 1 of 12) intron (NM_001171805, intron 1 of 12) 18343 NM_001171805 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr7-8736 chr7 76230167 76230377 + 5.54 0.000 intron (NM_001110199, intron 1 of 14) CR1-3_Croc|LINE|CR1 28376 NM_001110199 222183 Hs.511025 NM_001039212 ENSG00000177679 SRRM3 - serine/arginine repetitive matrix 3 protein-coding chr6-7724 chr6 89793786 89793996 + 5.54 0.000 exon (NM_014611, exon 5 of 102) exon (NM_014611, exon 5 of 102) 25903 NM_014611 23195 Hs.529948 NM_014611 ENSG00000112159 MDN1 Rea1 midasin AAA ATPase 1 protein-coding chr4-7787 chr4 96537136 96537346 + 5.54 0.000 intron (NR_147149, intron 2 of 3) intron (NR_147149, intron 2 of 3) 226538 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr5-6715 chr5 68538742 68538952 + 5.54 0.000 Intergenic Intergenic 246270 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr8-5075 chr8 38756805 38757015 + 5.54 0.000 promoter-TSS (NM_001352804) promoter-TSS (NM_001352804) -365 NM_001352796 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr12-8122 chr12 120144856 120145066 + 5.54 0.000 exon (NM_006836, exon 40 of 58) exon (NM_006836, exon 40 of 58) 10538 NR_039719 100616179 NR_039719 ENSG00000266704 MIR4498 mir-4498 microRNA 4498 ncRNA chr16-5436 chr16 1149346 1149556 + 5.54 0.000 Intergenic Intergenic -3655 NM_021098 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr8-4404 chr8 106047388 106047598 + 5.54 0.000 intron (NR_125797, intron 1 of 4) intron (NR_125797, intron 1 of 4) 13010 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr2-10628 chr2 11612481 11612691 + 5.54 0.000 exon (NM_014668, exon 19 of 33) exon (NM_014668, exon 19 of 33) 57609 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr10-4819 chr10 11649941 11650151 + 5.54 0.000 Intergenic Intergenic -38257 NR_125732 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr11-6838 chr11 96001114 96001324 + 5.54 0.000 intron (NM_032427, intron 2 of 4) intron (NM_032427, intron 2 of 4) -77012 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chrX-2328 chrX 56745078 56745288 + 5.54 0.000 intron (NM_001348129, intron 2 of 2) Tigger7|DNA|TcMar-Tigger -7599 NR_002308 442454 Hs.663220 NR_002308 UQCRBP1 - ubiquinol-cytochrome c reductase binding protein pseudogene 1 pseudo chr3-8828 chr3 8517439 8517649 + 5.54 0.000 intron (NM_001278233, intron 1 of 4) MER113|DNA|hAT-Charlie 15721 NM_001278233 29995 Hs.475353 NM_014583 ENSG00000071282 LMCD1 - LIM and cysteine rich domains 1 protein-coding chr12-4535 chr12 25741927 25742137 + 5.54 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -93454 NM_001352234 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr4-8114 chr4 126355218 126355428 + 5.54 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 848064 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr20-1423 chr20 37250557 37250767 + 5.54 0.000 TTS (NM_001184731) TTS (NM_001184731) 6246 NM_021081 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chr5-5613 chr5 153048863 153049073 + 5.54 0.000 Intergenic Intergenic -76619 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr6-3978 chr6 108895524 108895734 + 5.54 0.000 intron (NM_001286609, intron 5 of 16) intron (NM_001286609, intron 5 of 16) 28474 NR_104137 101929716 NR_104137 ARMC2-AS1 - ARMC2 antisense RNA 1 ncRNA chr4-5941 chr4 153871147 153871357 + 5.54 0.000 Intergenic Intergenic -82169 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr14-3400 chr14 95563325 95563535 + 5.54 0.000 Intergenic AluSx1|SINE|Alu -10132 NR_146450 100506999 Hs.112858 NR_146449 ENSG00000258390 LINC02318 - long intergenic non-protein coding RNA 2318 ncRNA chr5-3627 chr5 136847896 136848106 + 5.54 0.000 Intergenic L1PA7|LINE|L1 -280196 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr18-2293 chr18 77293825 77294035 + 5.54 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 44082 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr2-14446 chr2 223010652 223010862 + 5.54 0.000 Intergenic Intergenic -41173 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr15-3430 chr15 90511037 90511247 + 5.54 0.000 Intergenic LTR12D|LTR|ERV1 -18781 NM_022769 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr16-5899 chr16 2352216 2352426 + 5.54 0.000 intron (NR_003574, intron 1 of 16) MER91A|DNA|hAT-Tip100 11399 NR_003574 650655 Hs.376281 NR_003574 ENSG00000238098 ABCA17P ABCA17 ATP binding cassette subfamily A member 17, pseudogene pseudo chrX-1780 chrX 73068761 73068971 + 5.54 0.000 Intergenic SVA_F|Retroposon|SVA 10646 NM_001012977 340529 Hs.450320 NM_001012977 ENSG00000186288 PABPC1L2A RBM32A poly(A) binding protein cytoplasmic 1 like 2A protein-coding chr8-7302 chr8 132408750 132408960 + 5.54 0.000 intron (NM_004519, intron 1 of 14) MLT1E|LTR|ERVL-MaLR 38407 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr22-2732 chr22 39138099 39138309 + 5.54 0.000 intron (NM_001346743, intron 4 of 5) AluY|SINE|Alu 14476 NM_001346743 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr7-7300 chr7 42115862 42116072 + 5.54 0.000 intron (NM_000168, intron 3 of 14) intron (NM_000168, intron 3 of 14) 121242 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr4-8470 chr4 157303618 157303828 + 5.54 0.000 exon (NM_000826, exon 3 of 16) exon (NM_000826, exon 3 of 16) 82995 NM_000826 2891 Hs.32763 NM_000826 ENSG00000120251 GRIA2 GLUR2|GLURB|GluA2|GluR-K2|HBGR2 glutamate ionotropic receptor AMPA type subunit 2 protein-coding chr8-4535 chr8 123450352 123450562 + 5.54 0.000 Intergenic L2|LINE|L2 33683 NM_018024 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr17-5266 chr17 19766527 19766737 + 5.54 0.000 Intergenic Intergenic -18334 NM_000691 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr2-9141 chr2 210137706 210137916 + 5.54 0.000 intron (NM_001307976, intron 2 of 13) AluJb|SINE|Alu 33598 NM_001307976 151050 Hs.282260 NM_152519 ENSG00000144445 KANSL1L C2orf67|MSL1v2 KAT8 regulatory NSL complex subunit 1 like protein-coding chr15-2298 chr15 67833902 67834112 + 5.54 0.000 TTS (NR_120345) TTS (NR_120345) 4872 NR_120345 101929076 Hs.297340 NR_120345 ENSG00000245719 LOC101929076 - uncharacterized LOC101929076 ncRNA chr14-3006 chr14 53667110 53667320 + 5.54 0.000 Intergenic Intergenic 281269 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr12-6371 chr12 64385606 64385816 + 5.54 0.000 intron (NM_001099676, intron 1 of 10) LTR8|LTR|ERV1 5047 NM_001170633 115749 Hs.535190 NM_001099676 ENSG00000185306 C12orf56 - chromosome 12 open reading frame 56 protein-coding chr4-7521 chr4 75218419 75218629 + 5.54 0.000 Intergenic L1PA4|LINE|L1 -133816 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA chr4-7862 chr4 103177405 103177615 + 5.54 0.000 intron (NM_001813, intron 13 of 48) intron (NM_001813, intron 13 of 48) 20833 NM_001813 1062 Hs.75573 NM_001813 ENSG00000138778 CENPE CENP-E|KIF10|MCPH13|PPP1R61 centromere protein E protein-coding chrX-3797 chrX 139117788 139117998 + 5.54 0.000 intron (NM_001139501, intron 2 of 7) intron (NM_001139501, intron 2 of 7) 87130 NM_001139501 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr3-10202 chr3 120608911 120609121 + 5.54 0.000 Intergenic Intergenic 12680 NM_004547 4710 Hs.304613 NM_004547 ENSG00000065518 NDUFB4 B15|CI-B15 NADH:ubiquinone oxidoreductase subunit B4 protein-coding chr9-6642 chr9 133141279 133141489 + 5.54 0.000 intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) 7826 NM_001042368 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr14-2094 chr14 72692785 72692995 + 5.54 0.000 intron (NM_001280544, intron 7 of 9) intron (NM_001280544, intron 7 of 9) 176070 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr6-8054 chr6 121458443 121458653 + 5.54 0.000 Intergenic Intergenic 22902 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr2-12452 chr2 59274947 59275157 + 5.54 0.000 intron (NR_110219, intron 2 of 2) MIR|SINE|MIR 57344 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr4-7203 chr4 41716829 41717039 + 5.54 0.000 Intergenic Intergenic 32036 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding chr4-6926 chr4 16241951 16242161 + 5.54 0.000 intron (NR_027697, intron 2 of 2) intron (NR_027697, intron 2 of 2) 15393 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr2-6312 chr2 67730574 67730784 + 5.54 0.000 Intergenic LTR33|LTR|ERVL 94883 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr6-7314 chr6 44416359 44416569 + 5.54 0.000 intron (NM_001253, intron 8 of 15) LTR33C|LTR|ERVL -19177 NR_039785 100616352 NR_039785 ENSG00000266619 MIR4642 - microRNA 4642 ncRNA chr19-6285 chr19 8044983 8045193 + 5.54 0.000 Intergenic Intergenic -7674 NM_001201359 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr9-8711 chr9 131470709 131470919 + 5.54 0.000 exon (NM_013318, exon 13 of 31) exon (NM_013318, exon 13 of 31) -14851 NR_003050 692093 NR_003050 ENSG00000231587 SNORD62B U62|U62B small nucleolar RNA, C/D box 62B snoRNA chr15-2269 chr15 50788876 50789086 + 5.54 0.000 Intergenic AluJb|SINE|Alu -23275 NM_032802 84888 Hs.401537 NM_032802 ENSG00000138600 SPPL2A IMP3|PSL2 signal peptide peptidase like 2A protein-coding chr12-6249 chr12 41305796 41306006 + 5.54 0.000 intron (NM_001164595, intron 3 of 9) MLT1A-int|LTR|ERVL-MaLR 117581 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr10-8579 chr10 95927454 95927664 + 5.54 0.000 intron (NM_001349008, intron 6 of 34) MIRb|SINE|MIR 19594 NM_001349008 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr14-5112 chr14 89198483 89198693 + 5.54 0.000 intron (NM_001085471, intron 4 of 6) MER20|DNA|hAT-Charlie 218645 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr2-13243 chr2 125658963 125659173 + 5.54 0.000 Intergenic HERVL-int|LTR|ERVL 458917 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr1-14478 chr1 48069529 48069739 + 5.54 0.000 Intergenic Intergenic -72249 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr4-3914 chr4 152824218 152824428 + 5.54 0.000 intron (NM_001287433, intron 2 of 8) AluSz|SINE|Alu 44369 NM_001025595 27236 Hs.416089 NM_014447 ENSG00000164144 ARFIP1 HSU52521 ADP ribosylation factor interacting protein 1 protein-coding chr1-12680 chr1 47554198 47554408 + 5.54 0.000 Intergenic Intergenic -116986 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr5-7735 chr5 59553099 59553309 + 5.54 0.000 intron (NM_001349242, intron 1 of 16) intron (NM_001349242, intron 1 of 16) 33294 NM_001349242 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5-6040 chr5 171441807 171442017 + 5.54 0.000 intron (NM_003862, intron 3 of 4) intron (NM_003862, intron 3 of 4) 22265 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chrX-4106 chrX 24503612 24503822 + 5.54 0.000 intron (NM_001142386, intron 4 of 11) intron (NM_001142386, intron 4 of 11) 38431 NM_001142386 5165 Hs.296031 NM_005391 ENSG00000067992 PDK3 CMTX6|GS1-358P8.4 pyruvate dehydrogenase kinase 3 protein-coding chr10-7217 chr10 117175174 117175384 + 5.54 0.000 Intergenic CpG -6224 NR_121651 101927704 Hs.342943 NR_121650 ENSG00000234474 MIR3663HG - MIR3663 host gene ncRNA chr19-4518 chr19 7849715 7849925 + 5.54 0.000 intron (NM_001159944, intron 5 of 19) MIRc|SINE|MIR 19602 NM_145245 115704 Hs.26870 NM_145245 ENSG00000142459 EVI5L - ecotropic viral integration site 5 like protein-coding chr1-9873 chr1 66303055 66303265 + 5.54 0.000 intron (NM_001037340, intron 5 of 14) L2c|LINE|L2 -28948 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr19-4576 chr19 11268096 11268306 + 5.54 0.000 Intergenic Intergenic -5677 NM_001367830 57572 Hs.591002 NM_020812 ENSG00000130158 DOCK6 AOS2|ZIR1 dedicator of cytokinesis 6 protein-coding chr3-4192 chr3 129490306 129490516 + 5.54 0.000 intron (NM_052990, intron 13 of 26) intron (NM_052990, intron 13 of 26) -38228 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr2-13966 chr2 188278639 188278849 + 5.54 0.000 intron (NR_126396, intron 1 of 2) AluSz|SINE|Alu 8947 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr10-7712 chr10 30634814 30635024 + 5.54 0.000 Intergenic L1MC3|LINE|L1 -5166 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr17-8441 chr17 76934279 76934489 + 5.54 0.000 intron (NM_144677, intron 11 of 16) MIRb|SINE|MIR 34815 NR_136416 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr14-3093 chr14 64433500 64433710 + 5.54 0.000 intron (NM_005956, intron 15 of 27) AluJb|SINE|Alu -31894 NM_004857 9495 Hs.656683 NM_004857 ENSG00000179841 AKAP5 AKAP75|AKAP79|H21 A-kinase anchoring protein 5 protein-coding chr1-14265 chr1 36970715 36970925 + 5.54 0.000 intron (NM_000831, intron 1 of 15) intron (NM_000831, intron 1 of 15) 63695 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr19-4095 chr19 15424917 15425127 + 5.54 0.000 exon (NM_001330395, exon 6 of 8) exon (NM_001330395, exon 6 of 8) -6034 NM_014371 26993 Hs.399800 NM_014371 ENSG00000011243 AKAP8L HA95|HAP95|NAKAP|NAKAP95 A-kinase anchoring protein 8 like protein-coding chr3-10411 chr3 130509021 130509231 + 5.54 0.000 Intergenic Intergenic -51208 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr3-7555 chr3 194674575 194674785 + 5.54 0.000 Intergenic AluSq|SINE|Alu -2489 NM_018385 55341 Hs.744061 NM_018385 ENSG00000041802 LSG1 - large 60S subunit nuclear export GTPase 1 protein-coding chr1-15356 chr1 147580045 147580255 + 5.54 0.000 intron (NM_004326, intron 1 of 9) intron (NM_004326, intron 1 of 9) 38649 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS BCL9 transcription coactivator protein-coding chr2-11808 chr2 16950160 16950370 + 5.54 0.000 Intergenic MIRc|SINE|MIR -284431 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr16-5835 chr16 848080 848290 + 5.54 0.000 Intergenic Intergenic 42742 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr10-7294 chr10 131514521 131514731 + 5.54 0.000 Intergenic Intergenic -202905 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr13-3795 chr13 45436829 45437039 + 5.54 0.000 Intergenic Intergenic -18479 NM_001286806 253512 Hs.591230 NM_001010875 ENSG00000174032 SLC25A30 KMCP1 solute carrier family 25 member 30 protein-coding chr10-7026 chr10 78604471 78604681 + 5.54 0.000 Intergenic Intergenic 337234 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr12-4998 chr12 79233050 79233260 + 5.54 0.000 intron (NM_001291901, intron 3 of 9) intron (NM_001291901, intron 3 of 9) -186102 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr16-3685 chr16 598790 599000 + 5.54 0.000 intron (NM_021168, intron 1 of 5) intron (NM_021168, intron 1 of 5) 8818 NM_001172665 57799 Hs.459630 NM_021168 ENSG00000197562 RAB40C RARL|RASL8C RAB40C, member RAS oncogene family protein-coding chr9-7270 chr9 6278102 6278312 + 5.54 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 29736 NM_001353802 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr8-4464 chr8 116505340 116505550 + 5.54 0.000 Intergenic MER90|LTR|ERV1 -146655 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr1-13186 chr1 206461632 206461842 + 5.54 0.000 3' UTR (NM_001170637, exon 22 of 22) 3' UTR (NM_001170637, exon 22 of 22) -8739 NM_001193322 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of nuclear factor kappa B kinase subunit epsilon protein-coding chr12-5832 chr12 38138886 38139096 + 5.54 0.000 Intergenic (TTTTAT)n|Simple_repeat|Simple_repeat -177783 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr20-2637 chr20 43051583 43051793 + 5.54 0.000 intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) 82945 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA chr4-5954 chr4 164081643 164081853 + 5.54 0.000 intron (NM_001166373, intron 2 of 7) (AC)n|Simple_repeat|Simple_repeat 115963 NM_012403 23520 Hs.661161 NM_012403 ANP32C PP32R1 acidic nuclear phosphoprotein 32 family member C protein-coding chr8-6192 chr8 34693490 34693700 + 5.54 0.000 Intergenic Intergenic -90326 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr22-4049 chr22 41754884 41755094 + 5.54 0.000 intron (NM_152513, intron 17 of 30) L2a|LINE|L2 -45633 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr21-1251 chr21 46343929 46344139 + 5.54 0.000 intron (NM_001315529, intron 3 of 46) L1PB|LINE|L1 19367 NM_001315529 5116 Hs.474069 NM_006031 ENSG00000160299 PCNT KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4 pericentrin protein-coding chr1-11207 chr1 244071488 244071698 + 5.54 0.000 Intergenic AluJb|SINE|Alu 18388 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr14-2800 chr14 22105341 22105551 + 5.54 0.000 Intergenic Intergenic 327307 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr10-7742 chr10 32682201 32682411 + 5.54 0.000 intron (NM_001321115, intron 22 of 43) L1PA15|LINE|L1 219166 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA chr5-7293 chr5 14422965 14423175 + 5.54 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -40913 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr19-5457 chr19 33674665 33674875 + 5.54 0.000 intron (NM_001127895, intron 2 of 4) intron (NM_001127895, intron 2 of 4) -9758 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr3-7967 chr3 171575027 171575237 + 5.54 0.000 Intergenic Intergenic -114724 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr13-3636 chr13 31020374 31020584 + 5.54 0.000 Intergenic L3|LINE|CR1 87823 NM_001353388 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr3-7609 chr3 15659096 15659306 + 5.54 0.000 intron (NM_001370752, intron 4 of 4) LTR16B2|LTR|ERVL 38170 NR_036085 100422990 NR_036085 ENSG00000264354 MIR3134 - microRNA 3134 ncRNA chr17-8367 chr17 74503538 74503748 + 5.54 0.000 Intergenic HERVH-int|LTR|ERV1 27832 NM_174892 124599 Hs.313343 NM_174892 ENSG00000178789 CD300LB CD300b|CLM-7|CLM7|CMRF35-A2|IREM-3|IREM3|TREM-5|TREM5 CD300 molecule like family member b protein-coding chr3-5198 chr3 71958315 71958525 + 5.54 0.000 Intergenic Arthur1C|DNA|hAT-Tip100 142035 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr16-5634 chr16 65038155 65038365 + 5.54 0.000 intron (NM_001797, intron 2 of 12) intron (NM_001797, intron 2 of 12) 83803 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr2-12709 chr2 79522405 79522615 + 5.54 0.000 promoter-TSS (NM_001282598) promoter-TSS (NM_001282598) -673 NM_001282598 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr10-8080 chr10 67801482 67801692 + 5.54 0.000 intron (NM_021800, intron 4 of 4) AluSq|SINE|Alu 36592 NM_201262 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding chr10-7949 chr10 54064342 54064552 + 5.54 0.000 intron (NM_001354411, intron 19 of 34) MER52A|LTR|ERV1 -421783 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr8-4734 chr8 142207030 142207240 + 5.54 0.000 intron (NR_024378, intron 2 of 2) (ATGG)n|Simple_repeat|Simple_repeat 8779 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr5-3222 chr5 90909051 90909261 + 5.54 0.000 intron (NR_003149, intron 83 of 89) intron (NR_003149, intron 83 of 89) 350359 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr1-9833 chr1 62139322 62139532 + 5.54 0.000 intron (NM_001350145, intron 41 of 43) intron (NM_001350145, intron 41 of 43) -55422 NM_001164835 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr2-3853 chr2 35886436 35886646 + 5.54 0.000 Intergenic Intergenic 415136 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr8-5326 chr8 214717 214927 + 5.54 0.000 intron (NR_003572, intron 3 of 3) LTR10C|LTR|ERV1 -17315 NM_001287255 169270 Hs.591388 NM_173539 ENSG00000172748 ZNF596 - zinc finger protein 596 protein-coding chr4-5431 chr4 15862239 15862449 + 5.54 0.000 Intergenic Intergenic 76396 NM_005130 9982 Hs.1690 NM_005130 ENSG00000137440 FGFBP1 FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17 fibroblast growth factor binding protein 1 protein-coding chr8-5533 chr8 68560770 68560980 + 5.54 0.000 intron (NR_146186, intron 7 of 12) Tigger3b|DNA|TcMar-Tigger -229384 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr16-6832 chr16 81694929 81695139 + 5.54 0.000 intron (NM_030629, intron 13 of 20) intron (NM_030629, intron 13 of 20) 29680 NR_045112 100129617 Hs.657151 NR_045112 LOC100129617 - uncharacterized LOC100129617 ncRNA chr9-7587 chr9 36348701 36348911 + 5.54 0.000 intron (NM_194328, intron 9 of 11) Tigger1|DNA|TcMar-Tigger 51463 NM_194329 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chrX-1412 chrX 21947224 21947434 + 5.54 0.000 intron (NM_004595, intron 1 of 10) MER5A|DNA|hAT-Charlie 6620 NM_004595 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chrX-4380 chrX 50624538 50624748 + 5.54 0.000 intron (NR_027121, intron 5 of 9) AluJr|SINE|Alu -153818 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr17-4610 chr17 5231999 5232209 + 5.54 0.000 intron (NR_152840, intron 5 of 5) LTR31|LTR|ERV1 2756 NM_001319190 388325 Hs.462080 NM_207103 ENSG00000161929 SCIMP C17orf87|UNQ5783 SLP adaptor and CSK interacting membrane protein protein-coding chr10-2908 chr10 128281855 128282065 + 5.54 0.000 Intergenic Intergenic -3990 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr11-9664 chr11 67066899 67067109 + 5.54 0.000 intron (NM_014578, intron 3 of 4) MIR3|SINE|MIR 10157 NM_001300886 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chrX-5382 chrX 151015468 151015678 + 5.54 0.000 Intergenic Intergenic 32188 NM_001301228 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr4-4263 chr4 21435686 21435896 + 5.54 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) 28967 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr13-1383 chr13 102120531 102120741 + 5.54 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) -74632 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr12-7579 chr12 76236408 76236618 + 5.54 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -23370 NR_146531 105369848 NR_146531 LNCOG LINC02407|lncRNA-OG lncRNA osteogenesis associated ncRNA chr9-5580 chr9 113164637 113164847 + 5.54 0.000 TTS (NM_001860) TTS (NM_001860) 13735 NM_001860 1318 Hs.24030 NM_001860 ENSG00000136867 SLC31A2 COPT2|CTR2|hCTR2 solute carrier family 31 member 2 protein-coding chr7-6436 chr7 158866427 158866637 + 5.54 0.000 intron (NM_001350918, intron 1 of 26) intron (NM_001350918, intron 1 of 26) 9974 NM_001350918 55112 Hs.389945 NM_018051 ENSG00000126870 WDR60 FAP163|SRPS6|SRTD8 WD repeat domain 60 protein-coding chr9-7849 chr9 84582699 84582909 + 5.54 0.000 Intergenic L1ME3F|LINE|L1 -85654 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chrX-4354 chrX 48515835 48516045 + 5.54 0.000 exon (NM_203474, exon 10 of 13) exon (NM_203474, exon 10 of 13) -5868 NM_006579 10682 Hs.30619 NM_006579 ENSG00000147155 EBP CDPX2|CHO2|CPX|CPXD|MEND EBP cholestenol delta-isomerase protein-coding chr19-7053 chr19 52231149 52231359 + 5.54 0.000 Intergenic Intergenic 9234 NR_106859 102466984 NR_106859 ENSG00000274380 MIR6801 hsa-mir-6801 microRNA 6801 ncRNA chr15-2540 chr15 43484491 43484701 + 5.54 0.000 intron (NM_001355001, intron 4 of 28) L2a|LINE|L2 8560 NM_001141979 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding chr18-2629 chr18 36594149 36594359 + 5.54 0.000 intron (NM_001281740, intron 6 of 28) intron (NM_001281740, intron 6 of 28) 69164 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr10-6825 chr10 18809561 18809771 + 5.54 0.000 Intergenic Intergenic 150235 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding chr2-13456 chr2 145464999 145465209 + 5.54 0.000 Intergenic MER131|DNA?|DNA? 797137 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr10-7755 chr10 33525060 33525270 + 5.54 0.000 Intergenic Intergenic -190260 NM_001024629 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr16-4726 chr16 83995686 83995896 + 5.54 0.000 intron (NM_001329748, intron 8 of 11) intron (NM_001329748, intron 8 of 11) 27143 NM_001329749 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr7-9742 chr7 158072986 158073196 + 5.54 0.000 intron (NM_130843, intron 10 of 21) intron (NM_130843, intron 10 of 21) 218506 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr11-10244 chr11 101091865 101092075 + 5.54 0.000 intron (NM_000926, intron 2 of 7) intron (NM_000926, intron 2 of 7) 37093 NM_001271161 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr1-9716 chr1 53071643 53071853 + 5.54 0.000 intron (NM_153703, intron 3 of 10) intron (NM_153703, intron 3 of 10) 9535 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr19-6609 chr19 29121622 29121832 + 5.54 0.000 Intergenic Intergenic 91424 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr2-8204 chr2 94837162 94837372 + 5.54 0.000 intron (NR_003366, intron 6 of 23) intron (NR_003366, intron 6 of 23) 19808 NR_003366 729171 Hs.456852 NR_003366 ENSG00000229089 ANKRD20A8P ANKRD20B ankyrin repeat domain 20 family member A8, pseudogene pseudo chr1-6134 chr1 164497270 164497480 + 5.54 0.000 Intergenic AluSx1|SINE|Alu -61985 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chrX-4212 chrX 37022056 37022266 + 5.54 0.000 Intergenic LTR16A2|LTR|ERVL 13802 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr20-3828 chr20 24276209 24276419 + 5.54 0.000 Intergenic Intergenic 76547 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA chr9-8205 chr9 108617472 108617682 + 5.54 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 238409 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr11-9210 chr11 38089770 38089980 + 5.54 0.000 Intergenic MER11A|LTR|ERVK 151274 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr1-13224 chr1 213656121 213656331 + 5.54 0.000 Intergenic MIR|SINE|MIR -268523 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr18-2336 chr18 12980726 12980936 + 5.54 0.000 intron (NM_031216, intron 6 of 8) SVA_D|Retroposon|SVA -10531 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr3-9238 chr3 38497050 38497260 + 5.54 0.000 intron (NR_153330, intron 2 of 7) intron (NR_153330, intron 2 of 7) 815 NR_134938 9941 Hs.517897 NM_005107 ENSG00000157036 EXOG ENDOGL1|ENDOGL2|ENGL|ENGL-a|ENGL-b|ENGLA|ENGLB exo/endonuclease G protein-coding chr17-2559 chr17 50030392 50030602 + 5.54 0.000 Intergenic Intergenic 25242 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 PICART1 - p53 inducible cancer associated RNA transcript 1 ncRNA chr19-6570 chr19 19620205 19620415 + 5.54 0.000 Intergenic Intergenic -1623 NR_038198 80714 Hs.466257 NM_025245 ENSG00000105717 PBX4 - PBX homeobox 4 protein-coding chr11-8723 chr11 7320940 7321150 + 5.54 0.000 intron (NM_175733, intron 3 of 6) intron (NM_175733, intron 3 of 6) 69141 NM_175733 143425 Hs.177193 NM_175733 ENSG00000170743 SYT9 - synaptotagmin 9 protein-coding chr2-14765 chr2 240293523 240293733 + 5.54 0.000 Intergenic Intergenic -142035 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr6-5897 chr6 44104277 44104487 + 5.54 0.000 Intergenic Intergenic 21885 NM_001318770 64928 Hs.311190 NM_032111 ENSG00000180992 MRPL14 L14mt|L32mt|MRP-L14|MRP-L32|MRPL32|RMPL32|RPML32 mitochondrial ribosomal protein L14 protein-coding chr5-8678 chr5 141417671 141417881 + 5.54 0.000 promoter-TSS (NM_032101) promoter-TSS (NM_032101) 99 NM_018927 56099 Hs.368160 NM_018927 ENSG00000254122 PCDHGB7 ME6|PCDH-GAMMA-B7 protocadherin gamma subfamily B, 7 protein-coding chr1-12861 chr1 102799643 102799853 + 5.54 0.000 Intergenic Intergenic 308748 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr3-9080 chr3 27451378 27451588 + 5.54 0.000 intron (NM_001258380, intron 2 of 23) L1MD3|LINE|L1 5295 NM_003615 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr12-7892 chr12 106866493 106866703 + 5.54 0.000 intron (NR_147139, intron 7 of 7) intron (NR_147139, intron 7 of 7) -89124 NM_001319666 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr4-8243 chr4 139142285 139142495 + 5.54 0.000 intron (NM_001371339, intron 1 of 9) L2a|LINE|L2 34828 NM_001371338 chr8-5169 chr8 94794506 94794716 + 5.54 0.000 TTS (NM_181787) TTS (NM_181787) -28676 NM_017864 55656 Hs.727669 NM_017864 ENSG00000164941 INTS8 C8orf52|INT8 integrator complex subunit 8 protein-coding chr10-5193 chr10 60097714 60097924 + 5.54 0.000 intron (NM_001204403, intron 29 of 43) intron (NM_001204403, intron 29 of 43) 43197 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr15-3936 chr15 39235460 39235670 + 5.54 0.000 Intergenic MSTA|LTR|ERVL-MaLR -15104 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr2-9649 chr2 23430898 23431108 + 5.54 0.000 intron (NM_052920, intron 1 of 13) intron (NM_052920, intron 1 of 13) 45824 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chrX-4534 chrX 68024368 68024578 + 5.54 0.000 Intergenic MIRb|SINE|MIR 409022 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr6-7440 chr6 54639609 54639819 + 5.54 0.000 Intergenic Charlie17b|DNA|hAT-Charlie -207057 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr6-7606 chr6 76573057 76573267 + 5.54 0.000 intron (NR_149101, intron 2 of 2) MLT1I|LTR|ERVL-MaLR 20461 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr7-6794 chr7 26799626 26799836 + 5.54 0.000 intron (NM_003930, intron 4 of 12) L1MA1|LINE|L1 57992 NM_001303468 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding chr1-9931 chr1 76300320 76300530 + 5.54 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 225679 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr10-7670 chr10 28248451 28248661 + 5.54 0.000 intron (NR_134518, intron 1 of 16) intron (NR_134518, intron 1 of 16) 33567 NM_173496 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr11-9373 chr11 48457679 48457889 + 5.54 0.000 Intergenic L1P4d|LINE|L1 -31009 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding chr6-3669 chr6 148592459 148592669 + 5.54 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 83413 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr5-4334 chr5 158305439 158305649 + 5.54 0.000 Intergenic Intergenic 104229 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr7-8493 chr7 51187685 51187895 + 5.54 0.000 intron (NM_015198, intron 4 of 12) intron (NM_015198, intron 4 of 12) 129019 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr9-5053 chr9 32928120 32928330 + 5.54 0.000 Intergenic MamGypLTR1c|LTR|Gypsy 73351 NM_001195249 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr17-8024 chr17 50123932 50124142 + 5.54 0.000 intron (NM_174920, intron 2 of 10) intron (NM_174920, intron 2 of 10) 6123 NM_174920 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr19-6631 chr19 31531390 31531600 + 5.54 0.000 Intergenic Intergenic -56694 NM_001278576 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr12-7899 chr12 107441889 107442099 + 5.54 0.000 intron (NM_001347944, intron 1 of 14) MER5B|DNA|hAT-Charlie 121406 NM_001347944 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr11-7258 chr11 15976089 15976299 + 5.54 0.000 intron (NM_033326, intron 15 of 15) intron (NM_033326, intron 15 of 15) -6573 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr15-3353 chr15 82986367 82986577 + 5.54 0.000 intron (NM_031452, intron 1 of 3) CpG 262 NM_031452 83640 Hs.80624 NM_031452 ENSG00000169612 RAMAC C15orf18|FAM103A1|HsT19360|RAM|RAMMET RNA guanine-7 methyltransferase activating subunit protein-coding chr18-2835 chr18 7024791 7025001 + 5.54 0.000 intron (NM_005559, intron 17 of 62) intron (NM_005559, intron 17 of 62) 70219 NR_126040 101927188 Hs.680444 NR_126040 ENSG00000265069 LOC101927188 - uncharacterized LOC101927188 ncRNA chr1-14403 chr1 44507035 44507245 + 5.54 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) -38353 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr9-2260 chr9 97411842 97412052 + 5.54 0.000 promoter-TSS (NM_014290) promoter-TSS (NM_014290) -149 NM_001302884 23424 Hs.193842 NM_014290 ENSG00000196116 TDRD7 CATC4|PCTAIRE2BP|TRAP tudor domain containing 7 protein-coding chr1-13765 chr1 16879266 16879476 + 5.54 0.000 Intergenic Intergenic 7145 NR_160658 112267871 NR_160657 LOC112267871 - uncharacterized LOC112267871 ncRNA chr6-6909 chr6 13838449 13838659 + 5.54 0.000 Intergenic L2c|LINE|L2 -23994 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr8-6578 chr8 70223881 70224091 + 5.54 0.000 intron (NM_001321711, intron 2 of 21) intron (NM_001321711, intron 2 of 21) -152734 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr16-6499 chr16 59338063 59338273 + 5.54 0.000 Intergenic MER4CL34|LTR|ERV1 417023 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr2-10069 chr2 42429088 42429298 + 5.54 0.000 Intergenic Intergenic -60236 NM_001319037 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr5-6877 chr5 125134679 125134889 + 5.54 0.000 intron (NR_109882, intron 2 of 5) MIR|SINE|MIR 97953 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr17-8392 chr17 75239407 75239617 + 5.54 0.000 exon (NM_014001, exon 13 of 16) exon (NM_014001, exon 13 of 16) 22094 NM_014001 23163 Hs.87726 NM_014001 ENSG00000125447 GGA3 - golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding chr20-2525 chr20 34857623 34857833 + 5.54 0.000 intron (NM_178026, intron 7 of 14) AluJb|SINE|Alu 15128 NM_178026 2686 Hs.433738 NM_178026 ENSG00000131067 GGT7 D20S101|GGT4|GGTL3|GGTL5 gamma-glutamyltransferase 7 protein-coding chr3-11241 chr3 196549712 196549922 + 5.54 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 18737 NM_001345918 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr1-3510 chr1 161281408 161281618 + 5.54 0.000 intron (NM_001102566, intron 1 of 2) SVA_D|Retroposon|SVA 22768 NM_001102566 654790 Hs.433150 NM_001102566 ENSG00000248485 PCP4L1 IQM1 Purkinje cell protein 4 like 1 protein-coding chrX-3111 chrX 154129125 154129335 + 5.54 0.000 Intergenic AluJr|SINE|Alu -15013 NM_020061 5956 Hs.247787 NM_020061 ENSG00000102076 OPN1LW CBBM|CBP|COD5|RCP|ROP opsin 1, long wave sensitive protein-coding chr4-8308 chr4 144283538 144283748 + 5.54 0.000 Intergenic Intergenic -142925 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr4-2381 chr4 23934929 23935139 + 5.54 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -44987 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr9-7507 chr9 32525191 32525401 + 5.54 0.000 intron (NM_014314, intron 1 of 17) LTR3A|LTR|ERVK 900 NM_014314 23586 Hs.190622 NM_014314 ENSG00000107201 DDX58 RIG-I|RIG1|RIGI|RLR-1|SGMRT2 DExD/H-box helicase 58 protein-coding chr19-6955 chr19 47547505 47547715 + 5.54 0.000 intron (NM_001277075, intron 4 of 16) MIR3|SINE|MIR 25538 NM_001277075 84215 Hs.14161 NM_032255 ENSG00000118156 ZNF541 - zinc finger protein 541 protein-coding chr20-4408 chr20 59093196 59093406 + 5.54 0.000 Intergenic Intergenic -50455 NR_037929 100533975 Hs.656865 NR_037929 SLMO2-ATP5E - SLMO2-ATP5E readthrough ncRNA chr2-14231 chr2 210961158 210961368 + 5.54 0.000 Intergenic Intergenic 343692 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr5-5914 chr5 53007579 53007789 + 5.54 0.000 intron (NR_073107, intron 1 of 28) intron (NR_073107, intron 1 of 28) 18332 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chrX-918 chrX 16222039 16222249 + 5.54 0.000 Intergenic LTR7B|LTR|ERV1 54663 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - MAGE family member B17 protein-coding chr11-8691 chr11 4895679 4895889 + 5.54 0.000 Intergenic AluJr|SINE|Alu -11586 NM_001004749 119687 Hs.553560 NM_001004749 ENSG00000176895 OR51A7 OR11-27 olfactory receptor family 51 subfamily A member 7 protein-coding chr7-5271 chr7 22183034 22183244 + 5.54 0.000 intron (NM_001367603, intron 1 of 5) AluSx|SINE|Alu 10606 NM_001367601 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr1-13528 chr1 6251341 6251551 + 5.54 0.000 exon (NM_207370, exon 4 of 6) exon (NM_207370, exon 4 of 6) 7267 NM_001024598 390992 Hs.532677 NM_001024598 ENSG00000173673 HES3 bHLHb43 hes family bHLH transcription factor 3 protein-coding chr15-3434 chr15 90698930 90699140 + 5.54 0.000 intron (NR_120372, intron 2 of 3) AluJr|SINE|Alu 18105 NR_120372 101926895 Hs.564760 NR_120372 ENSG00000259736 CRTC3-AS1 - CRTC3 antisense RNA 1 ncRNA chr18-2976 chr18 23067708 23067918 + 5.54 0.000 Intergenic AluJb|SINE|Alu -66751 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr9-6474 chr9 91972908 91973118 + 5.54 0.000 Intergenic L1PA11|LINE|L1 -22785 NM_001318204 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr8-4257 chr8 92648234 92648444 + 5.54 0.000 intron (NR_125827, intron 2 of 4) intron (NR_125827, intron 2 of 4) 7155 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr8-6591 chr8 72087081 72087291 + 5.54 0.000 Intergenic Intergenic -11602 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr5-8666 chr5 140469948 140470158 + 5.54 0.000 intron (NM_020690, intron 10 of 35) HAL1b|LINE|L1 68220 NM_024668 54882 Hs.594084 NM_017747 ENSG00000131503 ANKHD1 MASK|MASK1|PP2500|VBARP ankyrin repeat and KH domain containing 1 protein-coding chr15-5049 chr15 84706762 84706972 + 5.54 0.000 intron (NM_014300, intron 1 of 5) MLT2E|LTR|ERVL 9272 NM_014300 23478 Hs.9534 NM_014300 ENSG00000140612 SEC11A 1810012E07Rik|SEC11L1|SPC18|SPCS4A|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding chr2-10384 chr2 176553962 176554172 + 5.54 0.000 Intergenic Intergenic 46985 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr14-4116 chr14 69731808 69732018 + 5.54 0.000 Intergenic AluSx3|SINE|Alu -35229 NM_001039465 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr6-8543 chr6 161360164 161360374 + 5.54 0.000 intron (NM_004562, intron 10 of 11) intron (NM_004562, intron 10 of 11) -86208 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr17-6217 chr17 9802941 9803151 + 5.54 0.000 intron (NM_001310219, intron 4 of 4) intron (NM_001310219, intron 4 of 4) -11454 NM_001220493 201140 Hs.61684 NM_001105571 ENSG00000184544 DHRS7C SDR32C2 dehydrogenase/reductase 7C protein-coding chr12-6569 chr12 121265778 121265988 + 5.54 0.000 intron (NM_172226, intron 5 of 15) MLT1A0|LTR|ERVL-MaLR 8702 NM_001270486 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr12-5826 chr12 32569232 32569442 + 5.54 0.000 intron (NM_001370297, intron 2 of 14) L2a|LINE|L2 35044 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr5-6890 chr5 129902652 129902862 + 5.54 0.000 Intergenic Intergenic -1708 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr15-2371 chr15 43722560 43722770 + 5.54 0.000 Intergenic AluSc5|SINE|Alu -4405 NR_146078 554225 Hs.657395 NR_146078 ENSG00000166763 STRCP1 STRCP stereocilin pseudogene 1 pseudo chr16-4706 chr16 81959157 81959367 + 5.54 0.000 3' UTR (NM_002661, exon 33 of 33) 3' UTR (NM_002661, exon 33 of 33) 52208 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chr3-8606 chr3 165215273 165215483 + 5.54 0.000 intron (NR_125764, intron 1 of 5) intron (NR_125764, intron 1 of 5) 8418 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr12-6670 chr12 2991878 2992088 + 5.54 0.000 intron (NM_201443, intron 1 of 10) intron (NM_201443, intron 1 of 10) 32048 NM_201443 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr15-1856 chr15 57306740 57306950 + 5.54 0.000 non-coding (NR_024433, exon 2 of 3) non-coding (NR_024433, exon 2 of 3) 6480 NR_024433 283663 Hs.181297 NR_024433 ENSG00000247982 LINC00926 - long intergenic non-protein coding RNA 926 ncRNA chr12-6023 chr12 108485583 108485793 + 5.54 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -11999 NR_120483 102723562 Hs.455693 NR_120483 ENSG00000247213 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA chr12-5058 chr12 90391016 90391226 + 5.54 0.000 Intergenic L2a|LINE|L2 97803 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr11-4464 chr11 103797830 103798040 + 5.54 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -51971 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr10-9030 chr10 123294136 123294346 + 5.54 0.000 Intergenic Intergenic 139839 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr15-4154 chr15 89462466 89462676 + 5.54 0.000 Intergenic MER51A|LTR|ERV1 34012 NM_001321041 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr1-12066 chr1 121460724 121460934 + 5.54 0.000 Intergenic Intergenic -58283 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo chr5-5864 chr5 1555041 1555251 + 5.54 0.000 Intergenic OldhAT1|DNA|hAT-Ac -31186 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr1-7548 chr1 196267793 196268003 + 5.54 0.000 intron (NR_146058, intron 26 of 29) LTR53-int|LTR|ERVL -179183 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr8-3106 chr8 32633509 32633719 + 5.54 0.000 intron (NM_013960, intron 5 of 12) intron (NM_013960, intron 5 of 12) -13118 NM_013959 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr11-7408 chr11 94330964 94331174 + 5.54 0.000 Intergenic Intergenic 25432 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr2-14250 chr2 212666398 212666608 + 5.54 0.000 Intergenic Intergenic -127701 NM_005235 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr11-10336 chr11 110121000 110121210 + 5.54 0.000 intron (NM_033390, intron 1 of 5) MER5B|DNA|hAT-Charlie 27713 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr1-13952 chr1 24311296 24311506 + 5.54 0.000 Intergenic Intergenic -7956 NM_198174 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr13-3274 chr13 42112262 42112472 + 5.54 0.000 intron (NM_178009, intron 1 of 29) AluJr|SINE|Alu -25675 NR_123715 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr12-5943 chr12 77535836 77536046 + 5.54 0.000 Intergenic LTR40A1|LTR|ERVL -294953 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr4-6280 chr4 80712910 80713120 + 5.54 0.000 intron (NM_001206997, intron 4 of 6) L2b|LINE|L2 -317693 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr6-8167 chr6 132063609 132063819 + 5.54 0.000 Intergenic Intergenic 51549 NR_039673 100616191 NR_039673 ENSG00000265669 MIR548AJ1 - microRNA 548aj-1 ncRNA chr21-1731 chr21 33402786 33402996 + 5.54 0.000 promoter-TSS (NM_001329128) promoter-TSS (NM_001329128) -5 NM_001329128 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr7-5279 chr7 22704873 22705083 + 5.54 0.000 Intergenic HERVH-int|LTR|ERV1 -22222 NM_001318095 3569 Hs.654458 NM_000600 ENSG00000136244 IL6 BSF-2|BSF2|CDF|HGF|HSF|IFN-beta-2|IFNB2|IL-6 interleukin 6 protein-coding chr11-10475 chr11 117933077 117933287 + 5.54 0.000 Intergenic Intergenic -3729 NM_001206790 84000 Hs.266308 NM_032046 ENSG00000137747 TMPRSS13 MSP|MSPL|MSPS|TMPRSS11 transmembrane serine protease 13 protein-coding chr11-8556 chr11 133067306 133067516 + 5.54 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -123643 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr1-5960 chr1 29836865 29837075 + 5.54 0.000 Intergenic L2a|LINE|L2 200642 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr20-3270 chr20 4324278 4324488 + 5.54 0.000 Intergenic LOR1a|LTR|ERV1 -75096 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr2-9995 chr2 18250414 18250624 + 5.54 0.000 Intergenic Intergenic 310134 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chrX-5036 chrX 121831670 121831880 + 5.54 0.000 Intergenic Intergenic 460803 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr3-9696 chr3 65318525 65318735 + 5.54 0.000 Intergenic Intergenic -575186 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr9-7220 chr9 852873 853083 + 5.54 0.000 intron (NM_001363767, intron 2 of 4) intron (NM_001363767, intron 2 of 4) 9689 NM_001363767 1761 Hs.98586 NM_021951 ENSG00000137090 DMRT1 CT154|DMT1 doublesex and mab-3 related transcription factor 1 protein-coding chr2-12835 chr2 95921004 95921214 + 5.54 0.000 intron (NM_001310154, intron 35 of 88) intron (NM_001310154, intron 35 of 88) 70715 NM_001310154 400986 Hs.646318 NM_001010914 ENSG00000174501 ANKRD36C - ankyrin repeat domain 36C protein-coding chr14-4609 chr14 52267467 52267677 + 5.54 0.000 promoter-TSS (NM_000953) promoter-TSS (NM_000953) -126 NM_000953 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr22-3044 chr22 36703500 36703710 + 5.54 0.000 promoter-TSS (NM_006078) promoter-TSS (NM_006078) -271 NR_134623 105373021 Hs.401697 NR_134623 LOC105373021 - uncharacterized LOC105373021 ncRNA chr17-8194 chr17 62703313 62703523 + 5.54 0.000 intron (NM_001288779, intron 11 of 11) intron (NM_001288779, intron 11 of 11) -2788 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr1-14755 chr1 67725122 67725332 + 5.54 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 40026 NM_001199742 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr18-2363 chr18 50190319 50190529 + 5.54 0.000 intron (NM_001080467, intron 1 of 39) intron (NM_001080467, intron 1 of 39) 4723 NM_001080467 4645 Hs.720076 NM_001080467 ENSG00000167306 MYO5B - myosin VB protein-coding chr19-6194 chr19 5373667 5373877 + 5.54 0.000 Intergenic Intergenic -32960 NM_130854 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr3-6327 chr3 79414854 79415064 + 5.54 0.000 intron (NR_110133, intron 1 of 2) intron (NR_110133, intron 1 of 2) 3232 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr3-7498 chr3 158762799 158763009 + 5.54 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -30418 NM_002888 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr20-2713 chr20 48359004 48359214 + 5.54 0.000 promoter-TSS (NR_026958) promoter-TSS (NR_026958) -802 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr20-3469 chr20 56155901 56156111 + 5.54 0.000 Intergenic MER73|LTR|ERVL -92726 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr13-1579 chr13 37870011 37870221 + 5.54 0.000 5' UTR (NM_016179, exon 1 of 11) 5' UTR (NM_016179, exon 1 of 11) 309 NM_001135955 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr9-8251 chr9 111240954 111241164 + 5.54 0.000 Intergenic AluJb|SINE|Alu 30155 NR_106989 102465800 NR_106989 ENSG00000274263 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA chr1-6357 chr1 7712884 7713094 + 5.54 0.000 intron (NM_001349624, intron 1 of 11) THE1B|LTR|ERVL-MaLR 8253 NM_001349616 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr16-5256 chr16 50136527 50136737 + 5.54 0.000 Intergenic ERVL-B4-int|LTR|ERVL -16279 NM_001040285 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr9-4155 chr9 3019777 3019987 + 5.54 0.000 Intergenic Intergenic -161707 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chrX-3320 chrX 119463270 119463480 + 5.54 0.000 Intergenic L3|LINE|CR1 4887 NR_134915 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr9-6967 chr9 106435275 106435485 + 5.54 0.000 Intergenic L2c|LINE|L2 -165548 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr1-15876 chr1 182783072 182783282 + 5.54 0.000 Intergenic Intergenic -6272 NM_001200052 80896 Hs.496969 NM_030769 ENSG00000135838 NPL C112|C1orf13|NAL|NPL1 N-acetylneuraminate pyruvate lyase protein-coding chr13-3568 chr13 26020287 26020497 + 5.54 0.000 3' UTR (NM_001313741, exon 36 of 36) 3' UTR (NM_001313741, exon 36 of 36) 30668 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr2-11663 chr2 7241297 7241507 + 5.54 0.000 Intergenic Intergenic -163522 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr2-11875 chr2 23119080 23119290 + 5.54 0.000 Intergenic MER58A|DNA|hAT-Charlie -265994 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2-11831 chr2 18910928 18911138 + 5.54 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 115938 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr9-8348 chr9 116574182 116574392 + 5.54 0.000 intron (NM_014010, intron 18 of 21) MER58A|DNA|hAT-Charlie 70004 NR_033973 100128505 Hs.675821 NR_033973 ENSG00000229105 ASTN2-AS1 - ASTN2 antisense RNA 1 ncRNA chr11-9948 chr11 76598620 76598830 + 5.54 0.000 Intergenic MER33|DNA|hAT-Charlie 71213 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr9-6157 chr9 70619373 70619583 + 5.54 0.000 intron (NM_001366143, intron 15 of 25) AluJr|SINE|Alu 190606 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr4-5647 chr4 8217942 8218152 + 5.54 0.000 intron (NM_018986, intron 7 of 17) intron (NM_018986, intron 7 of 17) 18757 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr5-6301 chr5 121199680 121199890 + 5.54 0.000 Intergenic Intergenic -122765 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr16-6374 chr16 52206929 52207139 + 5.54 0.000 Intergenic MIR3|SINE|MIR -51530 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA chr14-3293 chr14 84233454 84233664 + 5.54 0.000 Intergenic Intergenic -1038373 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr12-6923 chr12 24969602 24969812 + 5.54 0.000 Intergenic Intergenic -20606 NM_001178092 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chrX-4177 chrX 33543116 33543326 + 5.54 0.000 Intergenic L1MA4A|LINE|L1 -203833 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr13-4034 chr13 73194199 73194409 + 5.54 0.000 Intergenic L2c|LINE|L2 135299 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr11-7958 chr11 6456453 6456663 + 5.54 0.000 exon (NM_033278, exon 6 of 12) exon (NM_033278, exon 6 of 12) -15571 NM_000613 3263 Hs.426485 NM_000613 ENSG00000110169 HPX HX hemopexin protein-coding chr1-16721 chr1 248027081 248027291 + 5.54 0.000 intron (NM_001304535, intron 1 of 1) MER11C|LTR|ERVK 5238 NM_001258284 81466 Hs.742583 NM_001258284 ENSG00000197454 OR2L5 OR2L11|OR2L5P olfactory receptor family 2 subfamily L member 5 protein-coding chr5-7738 chr5 59792806 59793016 + 5.54 0.000 intron (NM_001165899, intron 3 of 16) L2|LINE|L2 -24063 NM_001364601 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr20-2196 chr20 52973590 52973800 + 5.54 0.000 intron (NM_173485, intron 1 of 2) intron (NM_173485, intron 1 of 2) 1337 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr3-9176 chr3 34207411 34207621 + 5.54 0.000 Intergenic L2a|LINE|L2 408886 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr2-8711 chr2 155723754 155723964 + 5.54 0.000 Intergenic Intergenic 531072 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA chr2-12008 chr2 28353007 28353217 + 5.54 0.000 Intergenic Intergenic -39746 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr12-8124 chr12 120222461 120222671 + 5.54 0.000 exon (NM_001243756, exon 5 of 11) exon (NM_001243756, exon 5 of 11) 21275 NR_038924 100506649 Hs.569205 NR_038924 ENSG00000255857 PXN-AS1 EyeLinc4 PXN antisense RNA 1 ncRNA chr5-6451 chr5 167300452 167300662 + 5.54 0.000 intron (NM_001122679, intron 2 of 29) HERVH-int|LTR|ERV1 -132156 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr11-5656 chr11 126261087 126261297 + 5.54 0.000 intron (NM_001330446, intron 7 of 8) intron (NM_001330446, intron 7 of 8) 7703 NM_003139 6734 Hs.368376 NM_003139 ENSG00000182934 SRPRA DP|SRPR|Sralpha SRP receptor subunit alpha protein-coding chr6-3558 chr6 51983462 51983672 + 5.54 0.000 intron (NM_138694, intron 35 of 66) intron (NM_138694, intron 35 of 66) 104046 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding chr13-2940 chr13 31946487 31946697 + 5.54 0.000 intron (NR_027062, intron 2 of 3) intron (NR_027062, intron 2 of 3) 85047 NR_103839 100507099 Hs.536364 NR_103839 FRY-AS1 - FRY antisense RNA 1 ncRNA chr2-12827 chr2 95056571 95056781 + 5.54 0.000 Intergenic Intergenic 30968 NM_002371 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr16-1953 chr16 49956106 49956316 + 5.54 0.000 Intergenic Intergenic -68995 NR_104042 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding chr12-2434 chr12 51197918 51198128 + 5.54 0.000 exon (NM_001330422, exon 6 of 11) exon (NM_001330422, exon 6 of 11) 19282 NM_001368008 5463 Hs.555886 NM_002702 ENSG00000184271 POU6F1 BRN5|MPOU|TCFB1 POU class 6 homeobox 1 protein-coding chr13-1471 chr13 96905413 96905623 + 5.54 0.000 Intergenic Intergenic 78654 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr1-15374 chr1 150478806 150479016 + 5.54 0.000 Intergenic AluSg|SINE|Alu -8508 NR_073513 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr7-3156 chr7 76282639 76282849 + 5.54 0.000 exon (NM_001291831, exon 13 of 16) exon (NM_001291831, exon 13 of 16) -19929 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr8-7376 chr8 138382390 138382600 + 5.54 0.000 intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 114766 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr17-6892 chr17 32240164 32240374 + 5.54 0.000 Intergenic AluSx1|SINE|Alu -25563 NM_138328 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr1-13497 chr1 4137997 4138207 + 5.54 0.000 Intergenic Intergenic -189122 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr13-4382 chr13 108858847 108859057 + 5.54 0.000 intron (NM_015011, intron 11 of 34) L2a|LINE|L2 229341 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr5-7640 chr5 51728750 51728960 + 5.54 0.000 Intergenic L2a|LINE|L2 -279176 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr13-4211 chr13 93083943 93084153 + 5.54 0.000 Intergenic Intergenic 38707 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA chr3-3837 chr3 31510733 31510943 + 5.54 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR -22087 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr9-8938 chr9 137349102 137349312 + 5.54 0.000 exon (NM_017820, exon 16 of 22) exon (NM_017820, exon 16 of 22) -46936 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr2-14420 chr2 221804576 221804786 + 5.54 0.000 Intergenic MLT2C2|LTR|ERVL -230479 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr22-3793 chr22 29721328 29721538 + 5.54 0.000 intron (NM_182527, intron 1 of 4) intron (NM_182527, intron 1 of 4) 1430 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr16-4129 chr16 3663595 3663805 + 5.54 0.000 intron (NM_001272049, intron 12 of 16) intron (NM_001272049, intron 12 of 16) 8996 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr4-1763 chr4 168679155 168679365 + 5.54 0.000 intron (NM_001166108, intron 3 of 21) (GT)n|Simple_repeat|Simple_repeat 47682 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr6-4302 chr6 14997286 14997496 + 5.54 0.000 Intergenic Intergenic -248678 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr1-12626 chr1 39139848 39140058 + 5.54 0.000 intron (NM_012090, intron 1 of 92) AluJr|SINE|Alu 55786 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chrX-4548 chrX 69024503 69024713 + 5.54 0.000 Intergenic Intergenic 140845 NM_145119 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr10-6756 chr10 133203907 133204117 + 5.54 0.000 intron (NM_152643, intron 17 of 29) intron (NM_152643, intron 17 of 29) -26205 NM_003577 8433 Hs.458406 NM_003577 ENSG00000171794 UTF1 - undifferentiated embryonic cell transcription factor 1 protein-coding chr11-5441 chr11 71648871 71649081 + 5.54 0.000 Intergenic Intergenic -66101 NM_001005405 440051 Hs.679617 NM_001005405 ENSG00000204571 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding chr1-12145 chr1 175098261 175098471 + 5.54 0.000 exon (NM_022093, exon 9 of 19) exon (NM_022093, exon 9 of 19) 30533 NM_022093 63923 Hs.156369 NM_022093 ENSG00000120332 TNN TN-W tenascin N protein-coding chr4-5982 chr4 181971563 181971773 + 5.54 0.000 Intergenic AluJr4|SINE|Alu -141695 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr3-11028 chr3 182003278 182003488 + 5.54 0.000 non-coding (NR_104146, exon 8 of 8) non-coding (NR_104146, exon 8 of 8) 51019 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr19-3753 chr19 50996716 50996926 + 5.54 0.000 intron (NM_144507, intron 2 of 2) intron (NM_144507, intron 2 of 2) 4783 NR_104008 11202 Hs.104570 NM_007196 ENSG00000129455 KLK8 HNP|NP|NRPN|PRSS19|TADG14 kallikrein related peptidase 8 protein-coding chr2-11565 chr2 510408 510618 + 5.54 0.000 Intergenic Intergenic -17858 NR_146436 727944 NR_146436 ENSG00000223985 LINC01874 - long intergenic non-protein coding RNA 1874 ncRNA chr7-8959 chr7 98762256 98762466 + 5.54 0.000 Intergenic Intergenic 107653 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr9-6785 chr9 30128739 30128949 + 5.54 0.000 Intergenic L2c|LINE|L2 279610 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr16-5717 chr16 82618730 82618940 + 5.54 0.000 Intergenic L2a|LINE|L2 -8134 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr12-6493 chr12 104215667 104215877 + 5.54 0.000 promoter-TSS (NM_001093771) promoter-TSS (NM_001093771) -7 NM_001093771 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr1-6614 chr1 40861558 40861768 + 5.54 0.000 exon (NM_133467, exon 1 of 1) exon (NM_133467, exon 1 of 1) 700 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr4-7369 chr4 60268667 60268877 + 5.54 0.000 Intergenic Intergenic -653847 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr15-5186 chr15 93347545 93347755 + 5.54 0.000 Intergenic AluSc8|SINE|Alu 141584 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr9-1665 chr9 34628887 34629097 + 5.54 0.000 promoter-TSS (NM_001017363) promoter-TSS (NM_001017363) -978 NM_001017363 138715 Hs.534549 NM_001017363 ENSG00000205143 ARID3C - AT-rich interaction domain 3C protein-coding chr4-7549 chr4 77271347 77271557 + 5.54 0.000 Intergenic Intergenic 114245 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr11-6820 chr11 94650258 94650468 + 5.54 0.000 intron (NR_135096, intron 4 of 6) MER51B|LTR|ERV1 82995 NM_152431 143689 Hs.660188 NM_152431 ENSG00000134627 PIWIL4 HIWI2|MIWI2 piwi like RNA-mediated gene silencing 4 protein-coding chrX-5107 chrX 128325688 128325898 + 5.54 0.000 Intergenic Intergenic -273390 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chrX-1292 chrX 116113329 116113539 + 5.54 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -57310 NM_000686 186 Hs.405348 NM_000686 ENSG00000180772 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor type 2 protein-coding chr2-9968 chr2 9546462 9546672 + 5.54 0.000 intron (NM_003183, intron 1 of 18) intron (NM_003183, intron 1 of 18) 9263 NM_003183 6868 Hs.404914 NM_003183 ENSG00000151694 ADAM17 ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE ADAM metallopeptidase domain 17 protein-coding chr15-5044 chr15 84153070 84153280 + 5.54 0.000 Intergenic Intergenic 17809 NR_033787 440299 Hs.454641 NR_033787 DNM1P41 DNM1DN11-6|DNM1DN11.6|DNM1DN11@ dynamin 1 pseudogene 41 pseudo chr19-3394 chr19 15185531 15185741 + 5.54 0.000 exon (NM_000435, exon 13 of 33) exon (NM_000435, exon 13 of 33) -6286 NR_106853 102465476 NR_106853 ENSG00000275711 MIR6795 hsa-mir-6795 microRNA 6795 ncRNA chr10-8805 chr10 107784530 107784740 + 5.54 0.000 Intergenic L1P4a|LINE|L1 284658 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr16-5868 chr16 1667274 1667484 + 5.54 0.000 exon (NM_020825, exon 16 of 20) exon (NM_020825, exon 16 of 20) -10900 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 JPT2 C16orf34|HN1L|L11 Jupiter microtubule associated homolog 2 protein-coding chr2-5987 chr2 68687009 68687219 + 5.54 0.000 Intergenic Intergenic 43526 NM_138964 10887 Hs.683430 NM_138964 ENSG00000169618 PROKR1 GPR73|GPR73a|PK-R1|PKR1|ZAQ prokineticin receptor 1 protein-coding chr2-14212 chr2 209307039 209307249 + 5.54 0.000 Intergenic MER52A|LTR|ERV1 -116903 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr15-4345 chr15 40605342 40605552 + 5.54 0.000 intron (NM_144508, intron 3 of 25) MLT1K|LTR|ERVL-MaLR 11198 NM_144508 57082 Hs.181855 NM_144508 ENSG00000137812 KNL1 AF15Q14|CASC5|CT29|D40|MCPH4|PPP1R55|Spc7|hKNL-1|hSpc105 kinetochore scaffold 1 protein-coding chr5-6551 chr5 14323222 14323432 + 5.54 0.000 intron (NM_007118, intron 9 of 56) intron (NM_007118, intron 9 of 56) -140656 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chrX-3152 chrX 20603379 20603589 + 5.54 0.000 Intergenic LTR16A2|LTR|ERVL -336575 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr11-5570 chr11 102925139 102925349 + 5.54 0.000 Intergenic Intergenic 30488 NM_002427 4322 Hs.2936 NM_002427 ENSG00000137745 MMP13 CLG3|MANDP1|MDST|MMP-13 matrix metallopeptidase 13 protein-coding chr1-15013 chr1 92710738 92710948 + 5.54 0.000 intron (NM_001350198, intron 2 of 19) intron (NM_001350198, intron 2 of 19) 74265 NM_001350197 7813 Hs.594434 NM_005665 ENSG00000067208 EVI5 EVI-5|NB4S ecotropic viral integration site 5 protein-coding chr13-3091 chr13 50130509 50130719 + 5.54 0.000 intron (NR_109974, intron 2 of 6) CpG -5073 NR_152566 8847 Hs.547964 NR_002612 ENSG00000231607 DLEU2 ALT1|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 ncRNA chr11-8464 chr11 116821913 116822123 + 5.54 0.000 intron (NM_000482, intron 2 of 2) intron (NM_000482, intron 2 of 2) 1286 NM_000482 337 Hs.1247 NM_000482 ENSG00000110244 APOA4 - apolipoprotein A4 protein-coding chr6-6498 chr6 118020247 118020457 + 5.54 0.000 intron (NM_001029858, intron 1 of 7) intron (NM_001029858, intron 1 of 7) -65551 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr7-9213 chr7 117248174 117248384 + 5.54 0.000 Intergenic L1MC4|LINE|L1 65598 NR_002332 93655 Hs.368131 NR_002332 ENSG00000004866 ST7-OT3 NCRNA00026|ST7|ST7OT3 ST7 overlapping transcript 3 ncRNA chr8-5497 chr8 55262623 55262833 + 5.54 0.000 intron (NM_052898, intron 1 of 2) MLT1A|LTR|ERVL-MaLR 160700 NM_052898 114786 Hs.130197 NM_052898 ENSG00000206579 XKR4 XRG4 XK related 4 protein-coding chr2-14455 chr2 223451921 223452131 + 5.54 0.000 Intergenic LTR104_Mam|LTR|Gypsy 150335 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr1-14015 chr1 26381265 26381475 + 5.54 0.000 Intergenic L1MB5|LINE|L1 -8576 NM_173574 257101 Hs.353208 NM_173574 ENSG00000176083 ZNF683 Hobit zinc finger protein 683 protein-coding chr16-6813 chr16 80550739 80550949 + 5.54 0.000 TTS (NM_001305017) TTS (NM_001305017) 9851 NM_130897 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr6-6665 chr6 162287317 162287527 + 5.54 0.000 intron (NM_004562, intron 2 of 11) AluJb|SINE|Alu -439710 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr7-8241 chr7 35366734 35366944 + 5.54 0.000 intron (NR_038864, intron 2 of 2) intron (NR_038864, intron 2 of 2) 52984 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr12-6707 chr12 4821090 4821300 + 5.54 0.000 intron (NM_002235, intron 1 of 1) intron (NM_002235, intron 1 of 1) 12019 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding chr22-3922 chr22 36426845 36427055 + 5.54 0.000 Intergenic MIRc|SINE|MIR -38883 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr3-8928 chr3 13437338 13437548 + 5.54 0.000 Intergenic AluSg7|SINE|Alu -17121 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr1-11386 chr1 47762494 47762704 + 5.54 0.000 3' UTR (NM_001194986, exon 7 of 7) 3' UTR (NM_001194986, exon 7 of 7) 234786 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr3-4217 chr3 134308550 134308760 + 5.54 0.000 Intergenic Intergenic -4921 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr10-7484 chr10 11089218 11089428 + 5.54 0.000 intron (NR_046108, intron 4 of 6) intron (NR_046108, intron 4 of 6) 16165 NR_046108 439950 Hs.568157 NR_046108 CELF2-AS2 - CELF2 antisense RNA 2 ncRNA chr11-8684 chr11 4484417 4484627 + 5.54 0.000 Intergenic L2|LINE|L2 -4357 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr2-5911 chr2 9518146 9518356 + 5.54 0.000 intron (NM_003183, intron 8 of 18) intron (NM_003183, intron 8 of 18) 37579 NM_003183 6868 Hs.404914 NM_003183 ENSG00000151694 ADAM17 ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE ADAM metallopeptidase domain 17 protein-coding chr4-7220 chr4 42829731 42829941 + 5.54 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -63430 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr11-8169 chr11 61900121 61900331 + 5.54 0.000 intron (NM_013401, intron 8 of 9) LTR16A1|LTR|ERVL -8681 NM_021727 3995 Hs.21765 NM_021727 ENSG00000221968 FADS3 CYB5RP|LLCDL3 fatty acid desaturase 3 protein-coding chr3-9629 chr3 58670826 58671036 + 5.54 0.000 Intergenic MER83|LTR|ERV1 -4157 NM_138805 131177 Hs.61265 NM_138805 ENSG00000198643 FAM3D EF7|OIT1 family with sequence similarity 3 member D protein-coding chr17-8267 chr17 67089838 67090048 + 5.54 0.000 intron (NM_001330447, intron 31 of 32) L1MD|LINE|L1 45389 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr11-9137 chr11 33927449 33927659 + 5.54 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -35478 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chrX-1270 chrX 107654823 107655033 + 5.54 0.000 Intergenic Intergenic 26504 NM_001204402 5631 Hs.56 NM_002764 ENSG00000147224 PRPS1 ARTS|CMTX5|DFN2|DFNX1|PPRibP|PRS-I|PRSI phosphoribosyl pyrophosphate synthetase 1 protein-coding chr22-3462 chr22 42730140 42730350 + 5.54 0.000 Intergenic Intergenic -8944 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr11-6335 chr11 62778611 62778821 + 5.54 0.000 intron (NM_006473, intron 5 of 10) intron (NM_006473, intron 5 of 10) 7320 NM_006473 10629 Hs.714400 NM_006473 ENSG00000162227 TAF6L PAF65A TATA-box binding protein associated factor 6 like protein-coding chr12-8259 chr12 124817743 124817953 + 5.54 0.000 intron (NR_160424, intron 1 of 11) intron (NR_160424, intron 1 of 11) 21823 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr10-8472 chr10 88528268 88528478 + 5.54 0.000 intron (NM_018363, intron 4 of 6) HAL1|LINE|L1 54945 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr1-10817 chr1 203263591 203263801 + 5.54 0.000 Intergenic Intergenic -23456 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr10-6523 chr10 68450292 68450502 + 5.54 0.000 intron (NM_001080449, intron 5 of 20) MER5A|DNA|hAT-Charlie 21576 NM_001080449 1763 Hs.532446 NM_001080449 ENSG00000138346 DNA2 DNA2L|hDNA2 DNA replication helicase/nuclease 2 protein-coding chrX-4482 chrX 63790314 63790524 + 5.54 0.000 Intergenic L2a|LINE|L2 -4332 NR_031567 100302115 NR_031567 ENSG00000222532 MIR1468 MIRN1468|hsa-mir-1468|mir-1468 microRNA 1468 ncRNA chr10-8506 chr10 90496830 90497040 + 5.54 0.000 intron (NR_110657, intron 2 of 6) L1M3d|LINE|L1 43870 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr19-6759 chr19 39646077 39646287 + 5.54 0.000 Intergenic Intergenic 7497 NR_026870 100129935 Hs.659307 NR_026870 ENSG00000268153 LOC100129935 - galectin 14 pseudogene pseudo chr2-13108 chr2 113279814 113280024 + 5.54 0.000 promoter-TSS (NM_013992) promoter-TSS (NM_013992) -998 NM_013992 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr9-7585 chr9 36268011 36268221 + 5.54 0.000 intron (NM_001128227, intron 1 of 11) AluJb|SINE|Alu 8862 NM_001128227 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding chr7-7570 chr7 122338006 122338216 + 5.54 0.000 intron (NM_001167940, intron 28 of 29) intron (NM_001167940, intron 28 of 29) -33361 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chr5-4818 chr5 59873405 59873615 + 5.54 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 20216 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr7-6553 chr7 51300693 51300903 + 5.54 0.000 intron (NM_015198, intron 1 of 12) intron (NM_015198, intron 1 of 12) 16011 NM_001346441 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr20-3290 chr20 9140276 9140486 + 5.54 0.000 intron (NM_001172646, intron 1 of 37) L2b|LINE|L2 71327 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr1-15008 chr1 92462735 92462945 + 5.54 0.000 Intergenic Intergenic 21114 NM_001127215 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr5-7585 chr5 42115433 42115643 + 5.54 0.000 Intergenic HERV9NC-int|LTR|ERV1 59807 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA chr5-6056 chr5 29314 29524 + 5.54 0.000 Intergenic Intergenic -62749 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr21-1860 chr21 42227892 42228102 + 5.54 0.000 intron (NM_207627, intron 3 of 15) THE1D|LTR|ERVL-MaLR 8099 NM_207174 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr10-7174 chr10 104584795 104585005 + 5.54 0.000 Intergenic AluY|SINE|Alu -56390 NM_014978 22986 Hs.671950 NM_014978 ENSG00000156395 SORCS3 SORCS sortilin related VPS10 domain containing receptor 3 protein-coding chr8-7464 chr8 141928015 141928225 + 5.54 0.000 Intergenic Intergenic -141807 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr5-6092 chr5 14726166 14726376 + 5.54 0.000 intron (NM_054027, intron 8 of 11) intron (NM_054027, intron 8 of 11) 13577 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr16-2983 chr16 19357426 19357636 + 5.54 0.000 Intergenic AluSq4|SINE|Alu -53008 NM_001308161 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr16-4703 chr16 81737971 81738181 + 5.54 0.000 Intergenic MER5B|DNA|hAT-Charlie -41215 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr2-14583 chr2 232145841 232146051 + 5.54 0.000 intron (NR_046476, intron 8 of 20) intron (NR_046476, intron 8 of 20) -26707 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr16-4050 chr16 1414532 1414742 + 5.54 0.000 promoter-TSS (NM_001193388) promoter-TSS (NM_001193388) 67 NM_001193388 64718 Hs.643536 NM_001037125 ENSG00000059145 UNKL C16orf28|ZC3H5L|ZC3HDC5L unk like zinc finger protein-coding chr20-2317 chr20 8602353 8602563 + 5.54 0.000 intron (NM_182734, intron 3 of 32) intron (NM_182734, intron 3 of 32) -228727 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr11-9446 chr11 61170587 61170797 + 5.54 0.000 Intergenic Intergenic -9266 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chrX-5313 chrX 144491779 144491989 + 5.54 0.000 Intergenic Intergenic 607813 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr4-6513 chr4 162114404 162114614 + 5.54 0.000 intron (NM_001128428, intron 1 of 14) (TC)n|Simple_repeat|Simple_repeat 49491 NM_020116 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr3-10800 chr3 160196590 160196800 + 5.54 0.000 intron (NR_108088, intron 1 of 9) intron (NR_108088, intron 1 of 9) 10397 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr18-2531 chr18 76571527 76571737 + 5.54 0.000 Intergenic AluSc5|SINE|Alu 42977 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chr5-7574 chr5 41087369 41087579 + 5.54 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -16132 NM_173489 133558 Hs.97714 NM_173489 ENSG00000171495 MROH2B HEATR7B2|SPIF maestro heat like repeat family member 2B protein-coding chr2-13810 chr2 174985725 174985935 + 5.54 0.000 intron (NR_038133, intron 1 of 11) intron (NR_038133, intron 1 of 11) 19423 NM_001822 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr5-6810 chr5 100960838 100961048 + 5.54 0.000 Intergenic L1MA1|LINE|L1 -57661 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr14-4772 chr14 63961378 63961588 + 5.54 0.000 intron (NM_015180, intron 8 of 114) intron (NM_015180, intron 8 of 114) 108479 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr11-10257 chr11 101895923 101896133 + 5.54 0.000 intron (NM_178127, intron 7 of 8) intron (NM_178127, intron 7 of 8) -18982 NM_001363543 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr2-12710 chr2 79621819 79622029 + 5.54 0.000 intron (NM_001282598, intron 1 of 17) L1MC3|LINE|L1 27435 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA chr18-1522 chr18 8365952 8366162 + 5.54 0.000 intron (NR_024419, intron 1 of 3) MER5B|DNA|hAT-Charlie 977 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr9-8641 chr9 129351674 129351884 + 5.54 0.000 Intergenic Intergenic 14856 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr4-3339 chr4 2740074 2740284 + 5.54 0.000 Intergenic HERVL-int|LTR|ERVL 16157 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr7-7246 chr7 27651775 27651985 + 5.54 0.000 intron (NM_152740, intron 1 of 7) L2c|LINE|L2 11003 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding chr16-2054 chr16 70423589 70423799 + 5.54 0.000 intron (NM_006927, intron 1 of 6) AluSp|SINE|Alu 15406 NM_006927 6483 Hs.368611 NM_006927 ENSG00000157350 ST3GAL2 Gal-NAc6S|SIAT4B|ST3GALII|ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding chr16-6329 chr16 49521804 49522014 + 5.54 0.000 intron (NM_001271620, intron 7 of 7) intron (NM_001271620, intron 7 of 7) -3324 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr8-7205 chr8 125839797 125840007 + 5.54 0.000 Intergenic L1PREC2|LINE|L1 111295 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr20-3875 chr20 29761548 29761758 + 5.54 0.000 Intergenic Intergenic -118731 NR_039689 100616194 NR_039689 ENSG00000266017 MIR4477B - microRNA 4477b ncRNA chr11-7988 chr11 11248267 11248477 + 5.54 0.000 Intergenic Intergenic 104878 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr15-5013 chr15 81650500 81650710 + 5.54 0.000 Intergenic L1MC4|LINE|L1 -276392 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr3-8518 chr3 137029778 137029988 + 5.54 0.000 Intergenic AluYc|SINE|Alu 71900 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr20-3687 chr20 14178583 14178793 + 5.54 0.000 intron (NM_001351663, intron 3 of 17) L1MC4a|LINE|L1 158924 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr12-5509 chr12 129019124 129019334 + 5.54 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -90461 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 TMEM132D-AS1 - TMEM132D antisense RNA 1 ncRNA chr14-3896 chr14 97525961 97526171 + 5.54 0.000 intron (NR_110166, intron 2 of 4) intron (NR_110166, intron 2 of 4) 67250 NR_110166 101929241 Hs.650839 NR_110165 ENSG00000246084 LINC02325 - long intergenic non-protein coding RNA 2325 ncRNA chr16-3368 chr16 55019368 55019578 + 5.54 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 88274 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr1-11259 chr1 2083669 2083879 + 5.54 0.000 intron (NM_001242874, intron 1 of 14) Charlie1|DNA|hAT-Charlie 9788 NM_001350805 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr16-3540 chr16 46729960 46730170 + 5.54 0.000 intron (NM_182493, intron 5 of 12) intron (NM_182493, intron 5 of 12) 18279 NM_182493 91807 Hs.130465 NM_182493 ENSG00000140795 MYLK3 MLCK|MLCK2|caMLCK myosin light chain kinase 3 protein-coding chr1-14655 chr1 58886197 58886407 + 5.54 0.000 intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 101151 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr2-9627 chr2 10047593 10047803 + 5.54 0.000 exon (NM_003597, exon 3 of 4) exon (NM_003597, exon 3 of 4) 3453 NM_001177718 8462 Hs.12229 NM_003597 ENSG00000172059 KLF11 FKLF|FKLF1|MODY7|TIEG2|Tieg3 Kruppel like factor 11 protein-coding chr3-6388 chr3 95351291 95351501 + 5.54 0.000 Intergenic Intergenic 331797 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr10-6330 chr10 118613988 118614198 + 5.54 0.000 Intergenic HERVK9-int|LTR|ERVK -18445 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chr12-7658 chr12 83475861 83476071 + 5.54 0.000 Intergenic Intergenic 788811 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr10-4569 chr10 105049443 105049653 + 5.54 0.000 intron (NM_014978, intron 5 of 26) intron (NM_014978, intron 5 of 26) -383332 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr17-7358 chr17 6870473 6870683 + 5.54 0.000 intron (NR_002710, intron 2 of 13) AluSx1|SINE|Alu 17002 NR_002710 245 Hs.378695 NR_002710 ENSG00000262943 ALOX12P2 ALOX12E arachidonate 12-lipoxygenase pseudogene 2 pseudo chr22-4016 chr22 40120916 40121126 + 5.54 0.000 intron (NM_001024843, intron 2 of 23) LTR79|LTR|ERVL -56904 NM_015088 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr2-14195 chr2 207652662 207652872 + 5.54 0.000 Intergenic AluSx|SINE|Alu -9617 NR_135566 102724714 Hs.443475 NR_135566 ENSG00000224137 LINC01857 - long intergenic non-protein coding RNA 1857 ncRNA chr9-6758 chr9 21173565 21173775 + 5.54 0.000 Intergenic Intergenic -7010 NM_002175 3452 Hs.113211 NM_002175 ENSG00000137080 IFNA21 IFN-alphaI|LeIF F|leIF-F interferon alpha 21 protein-coding chr16-1654 chr16 50847770 50847980 + 5.54 0.000 Intergenic AluJr|SINE|Alu -30898 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chr15-4283 chr15 37729013 37729223 + 5.54 0.000 Intergenic L1MA5A|LINE|L1 -205489 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr2-9799 chr2 127201969 127202179 + 5.54 0.000 intron (NM_001001665, intron 2 of 7) intron (NM_001001665, intron 2 of 7) 3693 NM_001001665 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr2-10614 chr2 8534412 8534622 + 5.54 0.000 Intergenic Intergenic 49275 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr11-4622 chr11 11908773 11908983 + 5.54 0.000 intron (NM_001282659, intron 8 of 27) intron (NM_001282659, intron 8 of 27) 67455 NM_001330208 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr9-5364 chr9 90585877 90586087 + 5.54 0.000 Intergenic Intergenic -3236 NR_034157 340515 Hs.522284 NM_001105317 LINC01501 - long intergenic non-protein coding RNA 1501 ncRNA chr17-6939 chr17 42620705 42620915 + 5.54 0.000 Intergenic AluJr|SINE|Alu 11127 NM_001070 7283 Hs.279669 NM_001070 ENSG00000131462 TUBG1 CDCBM4|GCP-1|TUBG|TUBGCP1 tubulin gamma 1 protein-coding chr1-16380 chr1 222092925 222093135 + 5.54 0.000 Intergenic Intergenic -114510 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr4-6514 chr4 162879233 162879443 + 5.54 0.000 Intergenic Intergenic 214290 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-3581 chr7 23957017 23957227 + 5.54 0.000 Intergenic MamGypLTR1b|LTR|Gypsy 246903 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr10-4283 chr10 7827020 7827230 + 5.54 0.000 intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 8620 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding chr18-2937 chr18 13504525 13504735 + 5.54 0.000 intron (NM_181482, intron 4 of 5) AluSx|SINE|Alu 44683 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr6-6352 chr6 57242603 57242813 + 5.54 0.000 Intergenic Intergenic -20394 NR_103822 51715 Hs.555016 NM_016277 ENSG00000112210 RAB23 HSPC137 RAB23, member RAS oncogene family protein-coding chr5-8939 chr5 158484833 158485043 + 5.54 0.000 Intergenic Intergenic -75165 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr12-4476 chr12 16575995 16576205 + 5.54 0.000 intron (NR_045014, intron 2 of 3) intron (NR_045014, intron 2 of 3) 29279 NM_001243611 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding chr17-5139 chr17 7986917 7987127 + 5.54 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -15648 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr16-5725 chr16 84270146 84270356 + 5.54 0.000 Intergenic Intergenic -24627 NM_021197 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr17-7419 chr17 10055128 10055338 + 5.54 0.000 intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) -18576 NM_201432 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr20-4125 chr20 42366527 42366737 + 5.54 0.000 intron (NM_133170, intron 9 of 31) intron (NM_133170, intron 9 of 31) -318851 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr8-7269 chr8 130230307 130230517 + 5.54 0.000 intron (NM_001362925, intron 4 of 29) intron (NM_001362925, intron 4 of 29) 66121 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr2-10161 chr2 84200300 84200510 + 5.54 0.000 Intergenic Intergenic -90277 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr4-6998 chr4 23235683 23235893 + 5.54 0.000 Intergenic Intergenic 521699 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr5-2733 chr5 132767809 132768019 + 5.54 0.000 intron (NM_001098813, intron 1 of 9) intron (NM_001098813, intron 1 of 9) 9325 NM_001098812 23176 Hs.522057 NM_015146 ENSG00000164402 SEPTIN8 SEP2|SEPT8 septin 8 protein-coding chr6-8419 chr6 151260349 151260559 + 5.54 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 20487 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr12-5785 chr12 8143433 8143643 + 5.54 0.000 Intergenic L1M2a|LINE|L1 -8686 NR_036440 642559 Hs.646545 NR_036440 ENSG00000235602 POU5F1P3 OCT3|OCT4|OCT4-pg3|OTF-3|OTF3|OTF3L|Oct-3|Oct-4|POU5F1|POU5F1L|POU5FLC12 POU class 5 homeobox 1 pseudogene 3 pseudo chr16-6827 chr16 81371656 81371866 + 5.54 0.000 intron (NM_022041, intron 9 of 10) L1MEf|LINE|L1 -13257 NR_039871 100616150 NR_039871 ENSG00000284473 MIR4720 - microRNA 4720 ncRNA chr11-10760 chr11 134478345 134478555 + 5.54 0.000 intron (NR_033852, intron 3 of 5) intron (NR_033852, intron 3 of 5) 41968 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA chr5-5945 chr5 90552300 90552510 + 5.54 0.000 Intergenic LTR78B|LTR|ERV1 -6392 NR_003149 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr21-1468 chr21 34648072 34648282 + 5.54 0.000 Intergenic Intergenic -20817 NM_053277 54102 Hs.473695 NM_053277 ENSG00000159212 CLIC6 CLIC1L chloride intracellular channel 6 protein-coding chr2-14213 chr2 209334483 209334693 + 5.54 0.000 Intergenic Intergenic -89459 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr21-1361 chr21 37754673 37754883 + 5.54 0.000 intron (NM_002240, intron 2 of 3) intron (NM_002240, intron 2 of 3) 161679 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr9-8440 chr9 122065782 122065992 + 5.54 0.000 intron (NM_194252, intron 1 of 3) intron (NM_194252, intron 1 of 3) 27719 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr16-3027 chr16 47927319 47927529 + 5.54 0.000 Intergenic LTR39|LTR|ERV1 -38265 NR_146502 105371238 Hs.743032 NR_146502 LINC02134 - long intergenic non-protein coding RNA 2134 ncRNA chr4-7178 chr4 40438718 40438928 + 5.54 0.000 exon (NM_019027, exon 3 of 5) exon (NM_019027, exon 3 of 5) 63296 NR_039966 100616274 NR_039966 ENSG00000263642 MIR4802 - microRNA 4802 ncRNA chr2-14651 chr2 235633381 235633591 + 5.54 0.000 intron (NM_001037131, intron 1 of 17) AluSq2|SINE|Alu -115565 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr19-5209 chr19 28576282 28576492 + 5.54 0.000 intron (NR_110759, intron 5 of 9) MSTA|LTR|ERVL-MaLR -30301 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr4-8652 chr4 176735328 176735538 + 5.54 0.000 intron (NM_005429, intron 1 of 6) intron (NM_005429, intron 1 of 6) 57489 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr8-5009 chr8 535614 535824 + 5.54 0.000 intron (NM_001256113, intron 1 of 3) intron (NM_001256113, intron 1 of 3) 9126 NM_001256113 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr5-5187 chr5 111756036 111756246 + 5.54 0.000 5' UTR (NM_001142483, exon 1 of 3) 5' UTR (NM_001142483, exon 1 of 3) 110 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr12-5850 chr12 48431984 48432194 + 5.54 0.000 Intergenic Intergenic -40576 NM_012404 23519 Hs.532658 NM_012404 ENSG00000139223 ANP32D PP32R2 acidic nuclear phosphoprotein 32 family member D protein-coding chr20-4437 chr20 61583326 61583536 + 5.54 0.000 intron (NM_001252338, intron 1 of 14) intron (NM_001252338, intron 1 of 14) -16330 NM_001252339 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr4-6389 chr4 113162321 113162531 + 5.54 0.000 intron (NM_001354241, intron 2 of 45) L2a|LINE|L2 10144 NR_107049 102465878 NR_107049 ENSG00000275810 MIR8082 hsa-mir-8082 microRNA 8082 ncRNA chr6-5242 chr6 136227122 136227332 + 5.54 0.000 Intergenic Intergenic 23084 NM_001099286 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr4-4116 chr4 6710250 6710460 + 5.54 0.000 promoter-TSS (NM_203462) promoter-TSS (NM_203462) -490 NM_203462 114932 Hs.593159 NM_152301 ENSG00000178988 MRFAP1L1 PP784 Morf4 family associated protein 1 like 1 protein-coding chr9-8066 chr9 97973887 97974097 + 5.54 0.000 Intergenic L1ME4a|LINE|L1 -9349 NM_006401 10541 Hs.730654 NM_006401 ENSG00000136938 ANP32B APRIL|PHAPI2|SSP29 acidic nuclear phosphoprotein 32 family member B protein-coding chr14-5194 chr14 94941775 94941985 + 5.54 0.000 Intergenic LTR16E1|LTR|ERVL 171238 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr14-5198 chr14 95078856 95079066 + 5.54 0.000 Intergenic Intergenic 54542 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr13-1897 chr13 45939097 45939307 + 5.54 0.000 Intergenic L1MC5|LINE|L1 -87449 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr3-9111 chr3 29301960 29302170 + 5.54 0.000 intron (NM_001003792, intron 1 of 13) AluJo|SINE|Alu 20753 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr11-9159 chr11 34789390 34789600 + 5.54 0.000 Intergenic Intergenic -126635 NM_001166158 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding chr17-7375 chr17 7667872 7668082 + 5.54 0.000 TTS (NM_000546) TTS (NM_000546) 7267 NM_001276699 7157 Hs.437460 NM_000546 ENSG00000141510 TP53 BCC7|BMFS5|LFS1|P53|TRP53 tumor protein p53 protein-coding chr22-2938 chr22 47544798 47545008 + 5.54 0.000 Intergenic Intergenic -57792 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LINC01644 LL22NC03-75H12.2 long intergenic non-protein coding RNA 1644 ncRNA chr17-7446 chr17 12732009 12732219 + 5.54 0.000 intron (NM_001146312, intron 5 of 13) intron (NM_001146312, intron 5 of 13) -25979 NR_104605 101928418 Hs.620346 NR_104605 ENSG00000227274 LOC101928418 - uncharacterized LOC101928418 ncRNA chr4-2449 chr4 170046726 170046936 + 5.54 0.000 Intergenic SVA_C|Retroposon|SVA -13828 NR_125890 9848 Hs.593942 NM_021647 ENSG00000198948 MFAP3L NYD-sp9 microfibril associated protein 3 like protein-coding chr2-9791 chr2 118904573 118904783 + 5.54 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -37491 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding chr14-3665 chr14 90396911 90397121 + 5.54 0.000 promoter-TSS (NM_006888) promoter-TSS (NM_006888) -13 NM_006888 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAM2|CAM3|CAMB|CAMC|CAMI|CAMIII|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr13-1593 chr13 40900766 40900976 + 5.54 0.000 intron (NR_038259, intron 1 of 5) SVA_D|Retroposon|SVA 20879 NR_038258 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo chr2-10494 chr2 223062344 223062554 + 5.54 0.000 Intergenic L2c|LINE|L2 10519 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr1-5450 chr1 46367637 46367847 + 5.54 0.000 Intergenic MIR|SINE|MIR 26564 NM_001256128 387338 Hs.163424 NM_199044 ENSG00000117481 NSUN4 SHTAP NOP2/Sun RNA methyltransferase 4 protein-coding chr7-8669 chr7 72222077 72222287 + 5.54 0.000 intron (NM_001363460, intron 2 of 5) AluSz|SINE|Alu 115209 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr3-7912 chr3 139481216 139481426 + 5.54 0.000 intron (NR_121609, intron 3 of 4) intron (NR_121609, intron 3 of 4) -4805 NM_004164 5948 Hs.655516 NM_004164 ENSG00000114113 RBP2 CRABP-II|CRBP2|CRBPII|RBPC2 retinol binding protein 2 protein-coding chr7-8022 chr7 18798065 18798275 + 5.54 0.000 intron (NM_058176, intron 16 of 22) L1ME3D|LINE|L1 288900 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr4-6007 chr4 571991 572201 + 5.54 0.000 Intergenic Intergenic 4204 NM_001362796 112441426 NM_001362796 TMEM271 - transmembrane protein 271 protein-coding chrX-3397 chrX 4791551 4791761 + 5.54 0.000 Intergenic Intergenic -158084 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr2-11723 chr2 10439841 10440051 + 5.54 0.000 TTS (NM_001287188) TTS (NM_001287188) 6903 NR_028374 100302743 Hs.730525 NR_028374 ENSG00000206633 SNORA80B ACA67B small nucleolar RNA, H/ACA box 80B snoRNA chr6-7119 chr6 35332277 35332487 + 5.54 0.000 Intergenic L1P2|LINE|L1 -10176 NM_001171819 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chrX-4117 chrX 25792743 25792953 + 5.54 0.000 Intergenic Intergenic -345495 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr10-7972 chr10 58643634 58643844 + 5.54 0.000 intron (NM_001080512, intron 2 of 20) L4_A_Mam|LINE|RTE-X -71276 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr9-7050 chr9 123799616 123799826 + 5.54 0.000 intron (NM_001352968, intron 2 of 18) intron (NM_001352968, intron 2 of 18) 130405 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr6-7578 chr6 73587310 73587520 + 5.54 0.000 Intergenic AluJr|SINE|Alu -66383 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chrX-4463 chrX 57168288 57168498 + 5.54 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -30768 NM_019003 54466 Hs.460725 NM_019003 ENSG00000147059 SPIN2A DXF34|SPIN2|TDRD25|dJ323P24.1 spindlin family member 2A protein-coding chr9-7789 chr9 79528699 79528909 + 5.54 0.000 Intergenic Intergenic -42969 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr17-6529 chr17 34664503 34664713 + 5.54 0.000 Intergenic L3|LINE|CR1 83859 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr5-8789 chr5 149299339 149299549 + 5.54 0.000 intron (NM_152406, intron 1 of 18) intron (NM_152406, intron 1 of 18) 27585 NM_001323062 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr12-7553 chr12 71903915 71904125 + 5.54 0.000 intron (NR_027449, intron 9 of 15) L1PA15|LINE|L1 -34825 NM_173353 121278 Hs.736576 NM_173353 ENSG00000139287 TPH2 ADHD7|NTPH tryptophan hydroxylase 2 protein-coding chr17-6332 chr17 66207150 66207360 + 5.54 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -15122 NM_001199165 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr5-2749 chr5 140427488 140427698 + 5.54 0.000 intron (NM_001197030, intron 1 of 9) SVA_D|Retroposon|SVA 25760 NM_024668 54882 Hs.594084 NM_017747 ENSG00000131503 ANKHD1 MASK|MASK1|PP2500|VBARP ankyrin repeat and KH domain containing 1 protein-coding chr18-3204 chr18 46411896 46412106 + 5.54 0.000 intron (NM_001256758, intron 1 of 5) UCON29|DNA|PiggyBac? 77777 NR_046357 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr4-6587 chr4 639590 639800 + 5.54 0.000 intron (NM_000283, intron 3 of 21) AluSx3|SINE|Alu -13482 NM_001350154 5158 Hs.623810 NM_000283 ENSG00000133256 PDE6B CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1 phosphodiesterase 6B protein-coding chr6-4713 chr6 57253239 57253449 + 5.54 0.000 Intergenic LTR101_Mam|LTR|ERVL 10002 NR_109774 100506188 Hs.485640 NR_109774 LOC100506188 - uncharacterized LOC100506188 ncRNA chr14-5212 chr14 96066113 96066323 + 5.54 0.000 intron (NM_001282463, intron 2 of 2) intron (NM_001282463, intron 2 of 2) 26856 NM_001282463 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr1-15259 chr1 113733584 113733794 + 5.54 0.000 intron (NM_001323046, intron 3 of 15) MLT1A0|LTR|ERVL-MaLR 25466 NM_006608 10745 Hs.655824 NM_006608 ENSG00000116793 PHTF1 PHTF putative homeodomain transcription factor 1 protein-coding chr1-7894 chr1 146400765 146400975 + 5.54 0.000 Intergenic LTR51|LTR|ERV1 24063 NR_004408 26869 NR_004408 ENSG00000207513 RNU1-3 HSD4|RNU1G3 RNA, U1 small nuclear 3 snRNA chr6-6845 chr6 8243594 8243804 + 5.54 0.000 Intergenic LTR64|LTR|ERV1 -141104 NR_037618 100526837 Hs.719272 NR_037618 EEF1E1-BLOC1S5 EEF1E1-MUTED EEF1E1-BLOC1S5 readthrough (NMD candidate) ncRNA chr14-4527 chr14 40009979 40010189 + 5.54 0.000 Intergenic HERVL-int|LTR|ERVL -577584 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr12-4486 chr12 19150659 19150869 + 5.54 0.000 intron (NM_019012, intron 3 of 25) intron (NM_019012, intron 3 of 25) 21031 NM_001190860 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr5-3112 chr5 53480781 53480991 + 5.54 0.000 intron (NM_013409, intron 1 of 5) intron (NM_013409, intron 1 of 5) 257 NM_013409 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr18-3102 chr18 36046307 36046517 + 5.54 0.000 intron (NM_001303411, intron 1 of 7) L1MDa|LINE|L1 21147 NM_001303412 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr2-9674 chr2 32097597 32097807 + 5.54 0.000 intron (NM_001363875, intron 3 of 15) AluSc8|SINE|Alu 34091 NM_199436 6683 Hs.468091 NM_014946 ENSG00000021574 SPAST ADPSP|FSP2|SPG4 spastin protein-coding chr17-6561 chr17 42879739 42879949 + 5.54 0.000 intron (NR_027254, intron 3 of 5) intron (NR_027254, intron 3 of 5) 12699 NR_002773 90586 Hs.367781 NR_002773 ENSG00000260105 AOC4P AOC4|UPAT amine oxidase copper containing 4, pseudogene pseudo chr6-6910 chr6 13842906 13843116 + 5.54 0.000 Intergenic Intergenic -28451 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr1-16704 chr1 246560386 246560596 + 5.54 0.000 intron (NM_022366, intron 2 of 7) AluJb|SINE|Alu 5770 NM_022366 64216 Hs.7395 NM_022366 ENSG00000162851 TFB2M Hkp1|mtTFB2 transcription factor B2, mitochondrial protein-coding chr13-1969 chr13 113256824 113257034 + 5.42 0.000 intron (NM_001008895, intron 18 of 19) (T)n|Simple_repeat|Simple_repeat -5991 NR_107042 102465874 NR_107042 ENSG00000277942 MIR8075 hsa-mir-8075 microRNA 8075 ncRNA chr3-9603 chr3 56677402 56677612 + 5.42 0.000 intron (NM_001365638, intron 1 of 22) MIR|SINE|MIR 5730 NM_001363940 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chr6-6500 chr6 118872930 118873140 + 5.42 0.000 intron (NM_017696, intron 6 of 11) AluJb|SINE|Alu -21117 NM_014034 25842 Hs.292316 NM_014034 ENSG00000111875 ASF1A CGI-98|CIA|HSPC146 anti-silencing function 1A histone chaperone protein-coding chr11-9869 chr11 73633762 73633972 + 5.42 0.000 Intergenic AluSz|SINE|Alu -12714 NM_001130033 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr13-4446 chr13 112103326 112103536 + 5.42 0.000 intron (NR_120392, intron 3 of 3) intron (NR_120392, intron 3 of 3) -3688 NR_120394 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr8-7560 chr8 145075434 145075644 + 5.42 0.000 Intergenic L1PA6|LINE|L1 23072 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding chr22-4124 chr22 44276046 44276256 + 5.42 0.000 intron (NM_001099294, intron 4 of 4) L2a|LINE|L2 36800 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr17-7345 chr17 6420511 6420721 + 5.42 0.000 Intergenic LTR33|LTR|ERVL 14505 NM_001285399 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr20-2994 chr20 43794735 43794945 + 5.42 0.000 Intergenic Intergenic -67838 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr6-2795 chr6 146857608 146857818 + 5.42 0.000 intron (NR_034115, intron 8 of 10) intron (NR_034115, intron 8 of 10) -53889 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr8-5805 chr8 349062 349272 + 5.42 0.000 Intergenic Intergenic 34007 NR_103537 157693 Hs.591390 NR_103537 ENSG00000182366 FAM87A - family with sequence similarity 87 member A ncRNA chr10-8148 chr10 70762000 70762210 + 5.42 0.000 3' UTR (NM_139155, exon 22 of 22) 3' UTR (NM_139155, exon 22 of 22) 20468 NR_134533 219793 Hs.386698 NM_152710 ENSG00000166220 TBATA C10orf27|SPATIAL thymus, brain and testes associated protein-coding chr6-4614 chr6 45813052 45813262 + 5.42 0.000 Intergenic Intergenic 124440 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr2-5661 chr2 199019958 199020168 + 5.42 0.000 Intergenic Intergenic 437876 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr3-5866 chr3 34989518 34989728 + 5.42 0.000 intron (NR_110817, intron 2 of 3) LTR12C|LTR|ERV1 404400 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr3-5285 chr3 123030520 123030730 + 5.42 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -2020 NR_046079 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr16-2628 chr16 4987521 4987731 + 5.42 0.000 exon (NM_014692, exon 3 of 16) exon (NM_014692, exon 3 of 16) 29296 NM_014692 9717 Hs.512856 NM_014692 ENSG00000103184 SEC14L5 PRELID4B SEC14 like lipid binding 5 protein-coding chr11-9817 chr11 71388041 71388251 + 5.42 0.000 Intergenic Intergenic 35208 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr11-7612 chr11 46006491 46006701 + 5.42 0.000 intron (NR_147890, intron 5 of 18) intron (NR_147890, intron 5 of 18) 83940 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr16-4313 chr16 29177795 29178005 + 5.42 0.000 Intergenic Intergenic 103058 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr3-11071 chr3 184385984 184386194 + 5.42 0.000 non-coding (NR_130747, exon 13 of 20) non-coding (NR_130747, exon 13 of 20) 5779 NM_001304474 8646 Hs.166186 NM_003741 ENSG00000090539 CHRD - chordin protein-coding chr6-7016 chr6 22684177 22684387 + 5.42 0.000 intron (NR_134614, intron 1 of 2) MLT2C1|LTR|ERVL 33642 NR_134613 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr7-7940 chr7 10277293 10277503 + 5.42 0.000 Intergenic Intergenic -425278 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr11-8926 chr11 17424218 17424428 + 5.42 0.000 intron (NR_147094, intron 16 of 37) L1PA8|LINE|L1 -34977 NM_001166290 3767 Hs.248141 NM_000525 ENSG00000187486 KCNJ11 BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3 potassium voltage-gated channel subfamily J member 11 protein-coding chr2-10762 chr2 39245717 39245927 + 5.42 0.000 Intergenic Intergenic -1839 NR_144521 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr5-6067 chr5 2862624 2862834 + 5.42 0.000 Intergenic Intergenic -55125 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA chr22-4024 chr22 40746914 40747124 + 5.42 0.000 Intergenic LTR23|LTR|ERV1 66939 NR_039923 100616283 NR_039923 ENSG00000266594 MIR4766 mir-4766 microRNA 4766 ncRNA chr12-7010 chr12 31900195 31900405 + 5.42 0.000 Intergenic L1ME1|LINE|L1 -13097 NR_135029 105369723 Hs.736954 NR_135029 ENSG00000255760 LINC02422 - long intergenic non-protein coding RNA 2422 ncRNA chr4-3541 chr4 168614568 168614778 + 5.42 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) -16905 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr3-9101 chr3 28561436 28561646 + 5.42 0.000 Intergenic L2b|LINE|L2 -13737 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr17-7952 chr17 47609081 47609291 + 5.42 0.000 intron (NM_001330257, intron 18 of 23) L2a|LINE|L2 -40733 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr1-13187 chr1 206481219 206481429 + 5.42 0.000 intron (NM_001193321, intron 12 of 20) intron (NM_001193321, intron 12 of 20) 6521 NR_106919 102466202 NR_106919 ENSG00000278465 MIR6769B hsa-mir-6769b microRNA 6769b ncRNA chr4-8508 chr4 161322659 161322869 + 5.42 0.000 Intergenic Intergenic -699969 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr15-4676 chr15 65128667 65128877 + 5.42 0.000 intron (NM_005707, intron 2 of 4) intron (NM_005707, intron 2 of 4) 5036 NM_005707 10081 Hs.458596 NM_005707 ENSG00000090470 PDCD7 ES18|HES18 programmed cell death 7 protein-coding chr9-5577 chr9 112861780 112861990 + 5.42 0.000 intron (NM_001012994, intron 7 of 8) intron (NM_001012994, intron 7 of 8) 28991 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr6-5641 chr6 72658501 72658711 + 5.42 0.000 intron (NR_120503, intron 2 of 3) AluSx|SINE|Alu 28111 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr17-3555 chr17 77727615 77727825 + 5.42 0.000 intron (NR_104134, intron 1 of 1) intron (NR_104134, intron 1 of 1) 839 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr6-2845 chr6 1749075 1749285 + 5.42 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 139265 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr8-7413 chr8 140050383 140050593 + 5.42 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 50047 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr2-5242 chr2 48755634 48755844 + 5.42 0.000 promoter-TSS (NM_000233) promoter-TSS (NM_000233) -15 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr9-6204 chr9 98154924 98155134 + 5.42 0.000 intron (NM_003389, intron 2 of 11) L1ME3B|LINE|L1 17863 NM_003389 7464 Hs.113094 NM_003389 ENSG00000106789 CORO2A CLIPINB|IR10|WDR2 coronin 2A protein-coding KZ208915.1-7 KZ208915.1 3540460 3540670 + 5.42 0.000 NA NA NA NA chr21-457 chr21 16206149 16206359 + 5.42 0.000 intron (NR_136543, intron 1 of 4) AluSz|SINE|Alu 11875 NR_136543 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr17-4688 chr17 28451919 28452129 + 5.42 0.000 Intergenic L1PREC2|LINE|L1 -21620 NM_001145975 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr22-4239 chr22 47045797 47046007 + 5.42 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -129860 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr13-3778 chr13 44318015 44318225 + 5.42 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -55530 NM_001346980 387923 Hs.377972 NM_001010897 ENSG00000151778 SERP2 C13orf21|bA269C23.1 stress associated endoplasmic reticulum protein family member 2 protein-coding chr6-8569 chr6 163661387 163661597 + 5.42 0.000 Intergenic Intergenic 9992 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr5-3702 chr5 10564073 10564283 + 5.42 0.000 5' UTR (NM_001164440, exon 1 of 4) 5' UTR (NM_001164440, exon 1 of 4) 108 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chrX-4157 chrX 31066871 31067081 + 5.42 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 5065 NM_031894 53940 Hs.333125 NM_031894 ENSG00000132446 FTHL17 CT38 ferritin heavy chain like 17 protein-coding chr11-8661 chr11 3563848 3564058 + 5.42 0.000 intron (NR_126335, intron 1 of 2) intron (NR_126335, intron 1 of 2) 8034 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA chr7-4897 chr7 124421519 124421729 + 5.42 0.000 Intergenic Intergenic -69528 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr1-10204 chr1 113207143 113207353 + 5.42 0.000 promoter-TSS (NR_038846) promoter-TSS (NR_038846) -995 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr2-9771 chr2 106370359 106370569 + 5.42 0.000 intron (NR_157576, intron 1 of 3) intron (NR_157576, intron 1 of 3) 719 NR_157576 402096 NR_157576 LOC402096 - anaphase promoting complex subunit 1 pseudogene pseudo chr7-9572 chr7 145451292 145451502 + 5.42 0.000 Intergenic Intergenic -615344 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr8-5587 chr8 90072631 90072841 + 5.42 0.000 intron (NM_001366795, intron 2 of 9) intron (NM_001366795, intron 2 of 9) 10143 NM_004929 793 Hs.65425 NM_004929 ENSG00000104327 CALB1 CALB|D-28K calbindin 1 protein-coding chr1-15264 chr1 114174455 114174665 + 5.42 0.000 Intergenic Intergenic -20691 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr2-12422 chr2 57035883 57036093 + 5.42 0.000 Intergenic L1P4e|LINE|L1 -850218 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr11-9238 chr11 41719382 41719592 + 5.42 0.000 intron (NR_120584, intron 1 of 5) MER72|LTR|ERV1 4919 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA chr11-8428 chr11 108110259 108110469 + 5.42 0.000 Intergenic Intergenic -11203 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr6-3967 chr6 106709946 106710156 + 5.42 0.000 Intergenic Intergenic 14566 NR_149100 105377926 Hs.635821 NR_149100 ENSG00000229654 LINC02526 - long intergenic non-protein coding RNA 2526 ncRNA chr11-10066 chr11 84591347 84591557 + 5.42 0.000 intron (NM_001351274, intron 5 of 26) AluSz|SINE|Alu 129490 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr14-4332 chr14 22825053 22825263 + 5.42 0.000 Intergenic Intergenic -4729 NM_178336 122704 Hs.355935 NM_178336 ENSG00000172590 MRPL52 - mitochondrial ribosomal protein L52 protein-coding chr3-9058 chr3 24950797 24951007 + 5.42 0.000 intron (NM_001290216, intron 2 of 10) MER5A|DNA|hAT-Charlie 121579 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr13-3735 chr13 41297153 41297363 + 5.42 0.000 intron (NM_001354073, intron 1 of 14) LTR49-int|LTR|ERV1 -14009 NM_001110798 79612 Hs.512914 NM_018527 ENSG00000172766 NAA16 NARG1L N(alpha)-acetyltransferase 16, NatA auxiliary subunit protein-coding chr17-7791 chr17 39793416 39793626 + 5.42 0.000 intron (NM_001257409, intron 2 of 5) intron (NM_001257409, intron 2 of 5) -15296 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr1-13908 chr1 22174284 22174494 + 5.42 0.000 Intergenic Intergenic -31292 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr13-3646 chr13 31505431 31505641 + 5.42 0.000 Intergenic (CTT)n|Simple_repeat|Simple_repeat -233990 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr10-9026 chr10 123084537 123084747 + 5.42 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -51328 NM_001105574 340784 Hs.531194 NM_001105574 ENSG00000188620 HMX3 NKX-5.1|NKX5.1|Nkx5-1 H6 family homeobox 3 protein-coding chr3-5798 chr3 27837090 27837300 + 5.42 0.000 intron (NR_146630, intron 3 of 4) MLT2B3|LTR|ERVL -3059 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr1-15022 chr1 92998996 92999206 + 5.42 0.000 Intergenic Intergenic -37579 NM_001252270 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chrX-3248 chrX 76455492 76455702 + 5.42 0.000 Intergenic MER51A|LTR|ERV1 27887 NM_020932 57692 Hs.8453 NM_020932 ENSG00000198934 MAGEE1 DAMAGE|HCA1 MAGE family member E1 protein-coding chr11-9151 chr11 34395084 34395294 + 5.42 0.000 Intergenic L1PB1|LINE|L1 -37179 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chrX-3976 chrX 13638271 13638481 + 5.42 0.000 Intergenic Intergenic -14765 NM_152634 170082 Hs.222855 NM_152634 ENSG00000176896 TCEANC - transcription elongation factor A N-terminal and central domain containing protein-coding chr10-4442 chr10 71128549 71128759 + 5.42 0.000 Intergenic LTR8A|LTR|ERV1 -83916 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr2-13399 chr2 140291688 140291898 + 5.42 0.000 intron (NM_018557, intron 84 of 90) L1PA5|LINE|L1 294892 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chrX-5032 chrX 121180374 121180584 + 5.42 0.000 Intergenic L1PBa|LINE|L1 132869 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chr6-7337 chr6 46031289 46031499 + 5.42 0.000 intron (NM_001370649, intron 1 of 5) L1ME3G|LINE|L1 -15505 NM_001256023 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr12-6306 chr12 52264243 52264453 + 5.42 0.000 Intergenic Intergenic -5840 NR_146088 85349 Hs.584773 NR_146088 ENSG00000135477 KRT87P HBD|KRT121P|KRTHBP4|psihHbD keratin 87 pseudogene pseudo chr2-9620 chr2 5133377 5133587 + 5.42 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -477260 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chrX-1837 chrX 104470015 104470225 + 5.42 0.000 Intergenic Intergenic -96079 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr15-3386 chr15 88169782 88169992 + 5.42 0.000 intron (NM_001007156, intron 5 of 15) L2c|LINE|L2 36087 NM_001320135 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding chr4-3385 chr4 25437143 25437353 + 5.42 0.000 Intergenic L1PA17|LINE|L1 59985 NM_001286756 29945 Hs.152173 NM_013367 ENSG00000053900 ANAPC4 APC4 anaphase promoting complex subunit 4 protein-coding chr19-6717 chr19 37819369 37819579 + 5.42 0.000 intron (NR_040013, intron 1 of 4) intron (NR_040013, intron 1 of 4) 2063 NR_040013 644554 Hs.683930 NR_040013 LOC644554 - uncharacterized LOC644554 ncRNA chr14-2008 chr14 56129186 56129396 + 5.42 0.000 intron (NM_021255, intron 1 of 5) intron (NM_021255, intron 1 of 5) 10880 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chrX-907 chrX 124268509 124268719 + 5.42 0.000 Intergenic AluSz|SINE|Alu -64046 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr10-7614 chr10 21527540 21527750 + 5.42 0.000 Intergenic Intergenic -1963 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr13-3984 chr13 64716713 64716923 + 5.42 0.000 Intergenic Intergenic -640807 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr3-7893 chr3 130005235 130005445 + 5.42 0.000 Intergenic ERVL-B4-int|LTR|ERVL 30620 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr4-8770 chr4 187919169 187919379 + 5.42 0.000 Intergenic Intergenic -76497 NM_174900 132625 Hs.335787 NM_174900 ENSG00000179059 ZFP42 REX-1|REX1|ZNF754|zfp-42 ZFP42 zinc finger protein protein-coding chr15-2494 chr15 101496219 101496429 + 5.42 0.000 Intergenic Intergenic -6340 NM_138325 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr22-3011 chr22 22047603 22047813 + 5.42 0.000 Intergenic MER3|DNA|hAT-Charlie -3774 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr7-5228 chr7 15580152 15580362 + 5.42 0.000 Intergenic AluSz|SINE|Alu -18242 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chr16-3771 chr16 28504482 28504692 + 5.42 0.000 intron (NM_145659, intron 1 of 4) intron (NM_145659, intron 1 of 4) 2247 NM_145659 246778 Hs.528111 NM_145659 ENSG00000197272 IL27 IL-27|IL-27A|IL27A|IL27p28|IL30|p28 interleukin 27 protein-coding chr12-8046 chr12 114675861 114676071 + 5.42 0.000 intron (NM_016569, intron 6 of 7) GA-rich|Low_complexity|Low_complexity 8209 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr10-8818 chr10 108938607 108938817 + 5.42 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -869419 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr1-5637 chr1 23838622 23838832 + 5.42 0.000 Intergenic LTR1A2|LTR|ERV1 -13268 NM_001166059 3155 Hs.533444 NM_000191 ENSG00000117305 HMGCL HL 3-hydroxy-3-methylglutaryl-CoA lyase protein-coding chr3-10164 chr3 116611226 116611436 + 5.42 0.000 Intergenic Intergenic 58858 NR_046624 100861506 Hs.641878 NR_046624 LINC00903 LSAMP-AS2 long intergenic non-protein coding RNA 903 ncRNA chr2-10779 chr2 43233856 43234066 + 5.42 0.000 intron (NM_001083953, intron 36 of 37) intron (NM_001083953, intron 36 of 37) 6750 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr1-9389 chr1 31145845 31146055 + 5.42 0.000 Intergenic L1ME3G|LINE|L1 -80233 NM_001020658 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr1-13068 chr1 178268807 178269017 + 5.42 0.000 intron (NM_170692, intron 1 of 17) HAL1|LINE|L1 -72539 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr9-6450 chr9 84647334 84647544 + 5.42 0.000 Intergenic ERVL-B4-int|LTR|ERVL -21019 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr14-4042 chr14 54847613 54847823 + 5.42 0.000 intron (NM_001024071, intron 3 of 5) MLT2A1|LTR|ERVL 30475 NR_036194 100422984 NR_036194 ENSG00000265432 MIR4308 - microRNA 4308 ncRNA chr2-8158 chr2 84579407 84579617 + 5.42 0.000 intron (NM_001370, intron 13 of 76) intron (NM_001370, intron 13 of 76) 63057 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chr12-3919 chr12 130462533 130462743 + 5.42 0.000 intron (NM_015347, intron 4 of 19) LTR82A|LTR|ERVL 124751 NM_004764 9271 Hs.405659 NM_004764 ENSG00000125207 PIWIL1 CT80.1|HIWI|MIWI|PIWI piwi like RNA-mediated gene silencing 1 protein-coding chr11-6186 chr11 45361478 45361688 + 5.42 0.000 Intergenic LTR16C|LTR|ERVL 6212 NR_120557 101928812 Hs.444059 NR_120557 ENSG00000254427 LINC02696 - long intergenic non-protein coding RNA 2696 ncRNA chrX-3279 chrX 101105806 101106016 + 5.42 0.000 intron (NM_001318523, intron 2 of 13) intron (NM_001318523, intron 2 of 13) 4853 NM_001318523 2491 Hs.348920 NM_006733 ENSG00000102384 CENPI CENP-I|FSHPRH1|LRPR1 centromere protein I protein-coding chr8-6574 chr8 70003917 70004127 + 5.42 0.000 Intergenic Intergenic 67230 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chrX-4150 chrX 30528938 30529148 + 5.42 0.000 Intergenic Intergenic 48723 NM_025159 80231 Hs.665009 NM_025159 ENSG00000120280 CXorf21 - chromosome X open reading frame 21 protein-coding chr8-3812 chr8 28484865 28485075 + 5.42 0.000 intron (NM_001258211, intron 1 of 7) AluSx3|SINE|Alu 5259 NM_172366 157574 Hs.741522 NM_172366 ENSG00000214050 FBXO16 FBX16 F-box protein 16 protein-coding chr19-3792 chr19 3929952 3930162 + 5.42 0.000 Intergenic AluJr|SINE|Alu -3046 NM_001289117 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr14-5375 chr14 103770032 103770242 + 5.42 0.000 intron (NM_015316, intron 4 of 16) FLAM_C|SINE|Alu 54393 NM_024071 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr16-3826 chr16 57417029 57417239 + 5.42 0.000 Intergenic Intergenic 12367 NM_002987 6361 Hs.546294 NM_002987 ENSG00000102970 CCL17 A-152E5.3|ABCD-2|SCYA17|TARC C-C motif chemokine ligand 17 protein-coding chr13-3993 chr13 67608440 67608650 + 5.42 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 236158 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr7-9074 chr7 104601310 104601520 + 5.42 0.000 intron (NM_199000, intron 1 of 2) L2a|LINE|L2 202677 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chrX-3590 chrX 78414845 78415055 + 5.42 0.000 Intergenic Intergenic -87259 NM_001282186 10800 Hs.733809 NM_006639 ENSG00000173198 CYSLTR1 CYSLT1|CYSLT1R|CYSLTR|HMTMF81 cysteinyl leukotriene receptor 1 protein-coding chr3-7962 chr3 168712493 168712703 + 5.42 0.000 intron (NR_021485, intron 6 of 15) intron (NR_021485, intron 6 of 15) 160744 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr2-12321 chr2 47610389 47610599 + 5.42 0.000 Intergenic MLT1G1-int|LTR|ERVL-MaLR -40163 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr7-9405 chr7 131757108 131757318 + 5.42 0.000 Intergenic Intergenic -153007 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr1-14489 chr1 48595144 48595354 + 5.42 0.000 intron (NM_001323575, intron 9 of 12) L2c|LINE|L2 -123041 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr14-4910 chr14 73142805 73143015 + 5.42 0.000 intron (NM_000021, intron 1 of 11) intron (NM_000021, intron 1 of 11) 6403 NM_000021 5663 Hs.3260 NM_000021 ENSG00000080815 PSEN1 ACNINV3|AD3|FAD|PS-1|PS1|S182 presenilin 1 protein-coding chr6-4507 chr6 37538097 37538307 + 5.42 0.000 Intergenic Intergenic 17220 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr11-10229 chr11 99153474 99153684 + 5.42 0.000 intron (NM_001243270, intron 1 of 23) L1PA13|LINE|L1 132630 NM_001243270 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr12-5788 chr12 12803192 12803402 + 5.42 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -10049 NM_016355 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr19-5337 chr19 3849291 3849501 + 5.42 0.000 intron (NM_015174, intron 1 of 18) intron (NM_015174, intron 1 of 18) 19642 NM_015174 23217 Hs.65750 NM_015174 ENSG00000105278 ZFR2 KIAA1086 zinc finger RNA binding protein 2 protein-coding chr18-3275 chr18 51998032 51998242 + 5.42 0.000 Intergenic Intergenic -342060 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr1-12100 chr1 156920182 156920392 + 5.42 0.000 promoter-TSS (NM_144702) promoter-TSS (NM_144702) -345 NM_144702 149499 Hs.491734 NM_144702 ENSG00000160838 LRRC71 C1orf92 leucine rich repeat containing 71 protein-coding chr18-2402 chr18 6827568 6827778 + 5.42 0.000 intron (NM_001366230, intron 2 of 17) SVA_D|Retroposon|SVA -6812 NM_001010000 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr13-3417 chr13 98614140 98614350 + 5.42 0.000 Intergenic Intergenic 36990 NR_046542 100874069 Hs.594160 NR_046542 STK24-AS1 - STK24 antisense RNA 1 ncRNA chr2-11126 chr2 135556648 135556858 + 5.42 0.000 intron (NM_001282799, intron 1 of 22) AluY|SINE|Alu 25269 NM_001354200 23518 Hs.412462 NM_015361 ENSG00000048991 R3HDM1 R3HDM R3H domain containing 1 protein-coding chr10-7513 chr10 13364468 13364678 + 5.42 0.000 Intergenic AluJr|SINE|Alu -16275 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr4-6216 chr4 56281129 56281339 + 5.42 0.000 intron (NM_020722, intron 3 of 10) MER1B|DNA|hAT-Charlie 106257 NM_001286668 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr4-8483 chr4 159390694 159390904 + 5.42 0.000 Intergenic LTR12C|LTR|ERV1 122990 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr2-8751 chr2 161740257 161740467 + 5.42 0.000 intron (NM_001354443, intron 2 of 25) MER21-int|LTR|ERVL 115946 NM_001354455 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr8-4452 chr8 115219079 115219289 + 5.42 0.000 Intergenic MIRc|SINE|MIR 448829 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr20-3266 chr20 3532226 3532436 + 5.42 0.000 intron (NM_001323332, intron 1 of 25) intron (NM_001323332, intron 1 of 25) 61313 NM_001323332 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr10-2964 chr10 62582842 62583052 + 5.42 0.000 intron (NM_199452, intron 1 of 6) intron (NM_199452, intron 1 of 6) 62499 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr12-7767 chr12 95463442 95463652 + 5.42 0.000 Intergenic AluSx1|SINE|Alu -10605 NM_001317183 10988 Hs.444986 NM_006838 ENSG00000111142 METAP2 MAP2|MNPEP|p67eIF2 methionyl aminopeptidase 2 protein-coding chr2-6538 chr2 208693017 208693227 + 5.42 0.000 intron (NR_136588, intron 3 of 5) intron (NR_136588, intron 3 of 5) 150480 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr10-7699 chr10 29876830 29877040 + 5.42 0.000 Intergenic Intergenic -139999 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr2-13248 chr2 126704971 126705181 + 5.42 0.000 Intergenic Intergenic 48918 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr5-8293 chr5 114249673 114249883 + 5.42 0.000 Intergenic Intergenic -112292 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr12-8209 chr12 123474100 123474310 + 5.42 0.000 intron (NM_178314, intron 6 of 6) intron (NM_178314, intron 6 of 6) 14501 NM_180699 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chr2-10314 chr2 145460514 145460724 + 5.42 0.000 Intergenic Intergenic 792652 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr5-8811 chr5 149793157 149793367 + 5.42 0.000 intron (NM_001172699, intron 1 of 10) intron (NM_001172699, intron 1 of 10) 21322 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chrX-1842 chrX 106438880 106439090 + 5.42 0.000 Intergenic Intergenic -172945 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr9-6882 chr9 87014615 87014825 + 5.42 0.000 intron (NR_027471, intron 1 of 1) intron (NR_027471, intron 1 of 1) 27406 NR_027471 440173 Hs.127361 NR_027471 ENSG00000269994 LOC440173 - uncharacterized LOC440173 ncRNA chr14-3750 chr14 41673804 41674014 + 5.42 0.000 intron (NM_001346173, intron 1 of 4) SVA_D|Retroposon|SVA 67053 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-14187 chr1 33617456 33617666 + 5.42 0.000 exon (NM_001281956, exon 38 of 71) exon (NM_001281956, exon 38 of 71) 144916 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr14-1104 chr14 71402266 71402476 + 5.42 0.000 intron (NM_001354285, intron 2 of 24) AluSx|SINE|Alu 4034 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA chr14-3987 chr14 34334390 34334600 + 5.42 0.000 Intergenic L4_C_Mam|LINE|RTE-X 127745 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr17-8491 chr17 78505485 78505695 + 5.42 0.000 intron (NM_173628, intron 30 of 80) intron (NM_173628, intron 30 of 80) 20680 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr20-4324 chr20 52820430 52820640 + 5.42 0.000 Intergenic L2c|LINE|L2 -151823 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr5-5953 chr5 99994706 99994916 + 5.42 0.000 Intergenic AluY|SINE|Alu 393443 NR_027503 100133050 Hs.534796 NR_027503 LOC100133050 - glucuronidase beta pseudogene pseudo chr4-6052 chr4 4374072 4374282 + 5.42 0.000 Intergenic AluSx|SINE|Alu -12079 NM_001287763 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr18-2547 chr18 2108740 2108950 + 5.42 0.000 Intergenic Intergenic 462660 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr2-13900 chr2 181232437 181232647 + 5.42 0.000 intron (NR_130784, intron 2 of 4) MIRc|SINE|MIR 73110 NR_039637 100616213 NR_039637 ENSG00000266705 MIR4437 mir-4437 microRNA 4437 ncRNA chr1-13905 chr1 22124199 22124409 + 5.42 0.000 intron (NM_030761, intron 2 of 4) L2b|LINE|L2 18793 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr1-15232 chr1 111948119 111948329 + 5.42 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) 38567 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr4-7667 chr4 86791176 86791386 + 5.42 0.000 intron (NM_080685, intron 40 of 47) L1PA6|LINE|L1 58103 NM_197965 345274 Hs.452996 NM_197965 ENSG00000145283 SLC10A6 SOAT solute carrier family 10 member 6 protein-coding chr6-2881 chr6 7794510 7794720 + 5.42 0.000 intron (NM_001718, intron 1 of 6) AluJo|SINE|Alu 68516 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr1-12929 chr1 119278313 119278523 + 5.42 0.000 Intergenic Intergenic -49834 NR_146623 105378934 NR_146623 ENSG00000232650 LINC01780 - long intergenic non-protein coding RNA 1780 ncRNA chr2-12935 chr2 101898867 101899077 + 5.42 0.000 Intergenic Intergenic -84493 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chrX-4477 chrX 63266729 63266939 + 5.42 0.000 Intergenic L1PA4|LINE|L1 84498 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr17-8505 chr17 79001164 79001374 + 5.42 0.000 intron (NM_001159772, intron 1 of 5) intron (NM_001159772, intron 1 of 5) 8495 NM_138793 124583 Hs.8859 NM_138793 ENSG00000171302 CANT1 DBQD|DBQD1|EDM7|SCAN-1|SCAN1|SHAPY calcium activated nucleotidase 1 protein-coding chr6-6934 chr6 15594365 15594575 + 5.42 0.000 intron (NR_036448, intron 7 of 9) AluSx1|SINE|Alu 68558 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr6-6354 chr6 57879305 57879515 + 5.42 0.000 Intergenic L1MA7|LINE|L1 57519 NR_133000 375513 Hs.561539 NM_206908 GUSBP4 C6orf216|GUSBL2|SMA3-L|SMAC3L GUSB pseudogene 4 pseudo chr6-6595 chr6 144316852 144317062 + 5.42 0.000 intron (NM_007124, intron 1 of 73) intron (NM_007124, intron 1 of 73) 25220 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr18-2343 chr18 24055914 24056124 + 5.42 0.000 intron (NM_001135993, intron 1 of 13) intron (NM_001135993, intron 1 of 13) -40559 NR_110796 102724246 Hs.569872 NR_110796 ENSG00000264745 TTC39C-AS1 - TTC39C antisense RNA 1 ncRNA chr1-13903 chr1 22098871 22099081 + 5.42 0.000 3' UTR (NM_001791, exon 6 of 6) 3' UTR (NM_001791, exon 6 of 6) 44121 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr8-6979 chr8 107754392 107754602 + 5.42 0.000 Intergenic Intergenic -256579 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr1-10349 chr1 154334458 154334668 + 5.42 0.000 exon (NM_001367934, exon 10 of 27) exon (NM_001367934, exon 10 of 27) 5765 NM_001367934 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr2-11577 chr2 1587967 1588177 + 5.42 0.000 Intergenic Intergenic 156443 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr7-9679 chr7 152915313 152915523 + 5.42 0.000 Intergenic Intergenic 155666 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr7-7416 chr7 74669206 74669416 + 5.42 0.000 intron (NM_001163636, intron 1 of 33) AluSz|SINE|Alu 11593 NM_033000 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr12-7880 chr12 106006732 106006942 + 5.42 0.000 Intergenic Intergenic 133196 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr2-7939 chr2 60805406 60805616 + 5.42 0.000 Intergenic AluSx|SINE|Alu 49243 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr4-7890 chr4 105506180 105506390 + 5.42 0.000 Intergenic L2a|LINE|L2 -32215 NM_006903 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chr5-8129 chr5 99118636 99118846 + 5.42 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -189027 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr4-8403 chr4 152019648 152019858 + 5.42 0.000 Intergenic MIRb|SINE|MIR -81000 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr2-11936 chr2 25303964 25304174 + 5.42 0.000 intron (NR_135490, intron 2 of 23) intron (NR_135490, intron 2 of 23) 24652 NR_031570 100302246 NR_031570 ENSG00000221445 MIR1301 MIRN1301|hsa-mir-1301|mir-1301 microRNA 1301 ncRNA chr4-6843 chr4 8663370 8663580 + 5.42 0.000 Intergenic L1ME3Cz|LINE|L1 70710 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr10-9141 chr10 128039437 128039647 + 5.42 0.000 intron (NM_001323354, intron 1 of 19) intron (NM_001323354, intron 1 of 19) -8070 NM_001323357 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr3-7583 chr3 9611496 9611706 + 5.42 0.000 Intergenic AluJr|SINE|Alu -37904 NM_022485 64419 Hs.475382 NM_022485 ENSG00000163719 MTMR14 C3orf29 myotubularin related protein 14 protein-coding chr2-10607 chr2 5525498 5525708 + 5.42 0.000 Intergenic Intergenic 165515 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr19-5686 chr19 10583331 10583541 + 5.42 0.000 intron (NM_001300887, intron 3 of 11) AluJo|SINE|Alu 3876 NM_005498 10053 Hs.18894 NM_005498 ENSG00000129354 AP1M2 AP1-mu2|HSMU1B|MU-1B|MU1B|mu2 adaptor related protein complex 1 subunit mu 2 protein-coding chr5-8169 chr5 104039418 104039628 + 5.42 0.000 Intergenic L2|LINE|L2 -476734 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr12-6201 chr12 23128871 23129081 + 5.42 0.000 Intergenic Intergenic -46660 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr5-6548 chr5 14165640 14165850 + 5.42 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 22403 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr11-10390 chr11 113386873 113387083 + 5.42 0.000 promoter-TSS (NM_178510) promoter-TSS (NM_178510) -801 NM_178510 255239 Hs.448473 NM_178510 ENSG00000170209 ANKK1 PKK2|sgK288 ankyrin repeat and kinase domain containing 1 protein-coding chr9-4342 chr9 128714592 128714802 + 5.42 0.000 intron (NM_013355, intron 12 of 21) intron (NM_013355, intron 12 of 21) 9430 NM_001318016 84885 Hs.133122 NM_032799 ENSG00000160446 ZDHHC12 DHHC-12|ZNF400 zinc finger DHHC-type containing 12 protein-coding chr2-10404 chr2 186827763 186827973 + 5.42 0.000 3' UTR (NM_182521, exon 9 of 9) 3' UTR (NM_182521, exon 9 of 9) 21302 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr13-4342 chr13 102468477 102468687 + 5.42 0.000 Intergenic L1PA8|LINE|L1 -66139 NM_001321948 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr3-5553 chr3 4190712 4190922 + 5.42 0.000 Intergenic L2c|LINE|L2 -112487 NM_001320677 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr8-6749 chr8 90298095 90298305 + 5.42 0.000 intron (NR_051989, intron 2 of 3) L2c|LINE|L2 76712 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr2-14281 chr2 215982700 215982910 + 5.42 0.000 intron (NM_018000, intron 2 of 4) MIRb|SINE|MIR 30746 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr4-7930 chr4 108592243 108592453 + 5.42 0.000 intron (NR_026968, intron 1 of 3) HAL1|LINE|L1 28109 NR_026968 285456 Hs.683863 NM_182591 ENSG00000234492 RPL34-AS1 - RPL34 antisense RNA 1 (head to head) ncRNA chr3-10250 chr3 123421013 123421223 + 5.42 0.000 intron (NM_183357, intron 1 of 20) MLT1C|LTR|ERVL-MaLR -4776 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr17-8347 chr17 73648948 73649158 + 5.42 0.000 Intergenic Intergenic -4608 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chr5-7442 chr5 31331943 31332153 + 5.42 0.000 Intergenic Intergenic 138362 NM_001362435 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chrX-4723 chrX 89562349 89562559 + 5.42 0.000 Intergenic Intergenic -359454 NM_138960 90316 Hs.592220 NM_138960 ENSG00000153779 TGIF2LX TGIFLX TGFB induced factor homeobox 2 like X-linked protein-coding chr2-11068 chr2 120763349 120763559 + 5.42 0.000 intron (NM_001371271, intron 1 of 13) intron (NM_001371271, intron 1 of 13) 27586 NM_001371271 chr4-5974 chr4 176901214 176901424 + 5.42 0.000 Intergenic AluY|SINE|Alu 25617 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr7-8343 chr7 43100988 43101198 + 5.42 0.000 Intergenic Intergenic -11554 NM_015052 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr11-8085 chr11 36212616 36212826 + 5.42 0.000 intron (NM_001304264, intron 4 of 5) intron (NM_001304264, intron 4 of 5) 76703 NM_001307932 29099 Hs.99443 NM_014186 ENSG00000110442 COMMD9 C11orf55|HSPC166|LINC00610 COMM domain containing 9 protein-coding chr5-4629 chr5 33604373 33604583 + 5.42 0.000 intron (NM_001324512, intron 14 of 21) AluSq|SINE|Alu 163702 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr5-8319 chr5 117141198 117141408 + 5.42 0.000 Intergenic Intergenic -274209 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr1-10953 chr1 212656106 212656316 + 5.42 0.000 Intergenic Intergenic 31737 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding chrX-4460 chrX 57002803 57003013 + 5.42 0.000 Intergenic L1M3e|LINE|L1 -7367 NM_001010862 169981 Hs.522672 NM_001010862 ENSG00000204271 SPIN3 SPIN-3|TDRD27|bA445O16.1 spindlin family member 3 protein-coding chr8-6594 chr8 72542562 72542772 + 5.42 0.000 intron (NM_004770, intron 1 of 2) L2c|LINE|L2 5442 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr5-7409 chr5 26633788 26633998 + 5.42 0.000 Intergenic MER47A|DNA|TcMar-Tigger 404693 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chrX-4105 chrX 24420404 24420614 + 5.42 0.000 Intergenic L1PA15|LINE|L1 -44718 NM_005391 5165 Hs.296031 NM_005391 ENSG00000067992 PDK3 CMTX6|GS1-358P8.4 pyruvate dehydrogenase kinase 3 protein-coding chr3-10921 chr3 173054435 173054645 + 5.42 0.000 intron (NM_031955, intron 2 of 10) L1PA8A|LINE|L1 86695 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr3-4591 chr3 186652876 186653086 + 5.42 0.000 3' UTR (NM_014375, exon 7 of 7) 3' UTR (NM_014375, exon 7 of 7) 12582 NM_001308077 26998 Hs.81073 NM_014375 ENSG00000090512 FETUB 16G2|Gugu|IRL685 fetuin B protein-coding chr9-6925 chr9 94540522 94540732 + 5.42 0.000 Intergenic HERVH-int|LTR|ERV1 -14418 NR_121568 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA chr2-13325 chr2 132731775 132731985 + 5.42 0.000 exon (NM_207363, exon 17 of 20) exon (NM_207363, exon 17 of 20) -60354 NM_001077427 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr11-7468 chr11 218499 218709 + 5.42 0.000 intron (NM_001370324, intron 5 of 5) intron (NM_001370324, intron 5 of 5) 9268 NR_106801 102465445 NR_106801 ENSG00000283920 MIR6743 hsa-mir-6743 microRNA 6743 ncRNA chr19-5547 chr19 53909063 53909273 + 5.42 0.000 Intergenic Intergenic -3569 NM_031896 59284 Hs.631597 NM_031896 ENSG00000105605 CACNG7 - calcium voltage-gated channel auxiliary subunit gamma 7 protein-coding chr7-5229 chr7 15876874 15877084 + 5.42 0.000 Intergenic L2a|LINE|L2 188601 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr21-1709 chr21 31682713 31682923 + 5.42 0.000 intron (NM_020706, intron 19 of 19) intron (NM_020706, intron 19 of 19) 23196 NM_000454 6647 Hs.443914 NM_000454 ENSG00000142168 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1 protein-coding chr1-11947 chr1 67479376 67479586 + 5.42 0.000 Intergenic Intergenic -49079 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr1-16037 chr1 201072114 201072324 + 5.42 0.000 intron (NM_000069, intron 16 of 43) intron (NM_000069, intron 16 of 43) 40207 NM_000069 779 Hs.1294 NM_000069 ENSG00000081248 CACNA1S CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP calcium voltage-gated channel subunit alpha1 S protein-coding chr12-4519 chr12 24232629 24232839 + 5.42 0.000 intron (NR_120472, intron 4 of 4) intron (NR_120472, intron 4 of 4) 9463 NR_120472 101928471 Hs.569156 NR_120472 ENSG00000256120 SOX5-AS1 - SOX5 antisense RNA 1 ncRNA chr3-9831 chr3 75995679 75995889 + 5.42 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -210235 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr10-8269 chr10 75900883 75901093 + 5.42 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 118227 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr2-13050 chr2 109268897 109269107 + 5.42 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 44623 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr19-5715 chr19 15000537 15000747 + 5.42 0.000 intron (NR_073589, intron 1 of 8) L1MA8|LINE|L1 10001 NR_073589 6511 Hs.515217 NM_005071 ENSG00000105143 SLC1A6 EAAT4 solute carrier family 1 member 6 protein-coding chr2-2673 chr2 231354268 231354478 + 5.42 0.000 intron (NM_001352754, intron 21 of 24) intron (NM_001352754, intron 21 of 24) -8335 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr7-8046 chr7 21860481 21860691 + 5.42 0.000 intron (NM_001277115, intron 68 of 81) L1MB3|LINE|L1 85313 NM_018719 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr7-5117 chr7 4699237 4699447 + 5.42 0.000 intron (NM_001037165, intron 1 of 8) AluYj4|SINE|Alu 17047 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr18-3432 chr18 64637767 64637977 + 5.42 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -377817 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr18-3164 chr18 42614201 42614411 + 5.42 0.000 intron (NR_046174, intron 7 of 9) intron (NR_046174, intron 7 of 9) 427638 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr20-4059 chr20 37931177 37931387 + 5.42 0.000 intron (NM_080607, intron 1 of 3) intron (NM_080607, intron 1 of 3) 28155 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr2-11686 chr2 8639865 8640075 + 5.42 0.000 Intergenic Intergenic 41891 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr5-8997 chr5 164629319 164629529 + 5.42 0.000 Intergenic Intergenic 159145 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr18-3333 chr18 56931863 56932073 + 5.42 0.000 intron (NM_015285, intron 22 of 27) intron (NM_015285, intron 22 of 27) 140151 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr1-16069 chr1 202298522 202298732 + 5.42 0.000 intron (NM_001017403, intron 7 of 17) AluSc|SINE|Alu 43309 NM_014176 29089 Hs.5199 NM_014176 ENSG00000077152 UBE2T FANCT|HSPC150|PIG50 ubiquitin conjugating enzyme E2 T protein-coding chr12-7013 chr12 32295044 32295254 + 5.42 0.000 intron (NR_148725, intron 3 of 9) intron (NR_148725, intron 3 of 9) -104409 NM_001370298 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr16-4332 chr16 30639742 30639952 + 5.42 0.000 Intergenic AluJr|SINE|Alu -10931 NM_001320464 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 - proline rich 14 protein-coding chr4-8349 chr4 147530778 147530988 + 5.42 0.000 intron (NR_045958, intron 3 of 6) intron (NR_045958, intron 3 of 6) 49786 NR_148963 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr13-3919 chr13 57570898 57571108 + 5.42 0.000 Intergenic L1PA16|LINE|L1 -60741 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr15-2853 chr15 41043492 41043702 + 5.42 0.000 intron (NM_017553, intron 24 of 35) intron (NM_017553, intron 24 of 35) 72649 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr10-6581 chr10 79467519 79467729 + 5.42 0.000 Intergenic Intergenic -22000 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr18-2817 chr18 5537898 5538108 + 5.42 0.000 intron (NM_001330557, intron 1 of 21) Kanga1d|DNA|TcMar-Tc2 2553 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr5-7997 chr5 85246341 85246551 + 5.42 0.000 Intergenic HERVL-int|LTR|ERVL -861566 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr1-15966 chr1 192315577 192315787 + 5.42 0.000 Intergenic Intergenic -1310 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr15-4582 chr15 59441336 59441546 + 5.42 0.000 intron (NM_152450, intron 1 of 8) MER3|DNA|hAT-Charlie 3255 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding chr17-8314 chr17 72022655 72022865 + 5.42 0.000 intron (NR_110876, intron 2 of 2) intron (NR_110876, intron 2 of 2) 3219 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA chr8-6700 chr8 84102043 84102253 + 5.42 0.000 Intergenic L1MD3|LINE|L1 -80639 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr1-16013 chr1 199076154 199076364 + 5.42 0.000 intron (NR_126351, intron 2 of 2) intron (NR_126351, intron 2 of 2) -57295 NR_110525 102800316 Hs.568480 NR_110525 LINC01222 TCONS_00000112 long intergenic non-protein coding RNA 1222 ncRNA chr1-11246 chr1 248805353 248805563 + 5.42 0.000 Intergenic Intergenic 19908 NM_001322462 80851 Hs.298573 NM_030645 ENSG00000175137 SH3BP5L - SH3 binding domain protein 5 like protein-coding chr3-8956 chr3 14898826 14899036 + 5.42 0.000 intron (NM_152536, intron 7 of 19) intron (NM_152536, intron 7 of 19) 48574 NR_046252 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr4-8476 chr4 158020795 158021005 + 5.42 0.000 Intergenic Intergenic -149852 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr8-3905 chr8 40480670 40480880 + 5.42 0.000 Intergenic Intergenic -137412 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr12-5715 chr12 117863204 117863414 + 5.42 0.000 intron (NM_173598, intron 1 of 19) MLT1K|LTR|ERVL-MaLR 105681 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr6-5835 chr6 27653788 27653998 + 5.42 0.000 Intergenic SVA_B|Retroposon|SVA -40142 NR_038293 100507173 Hs.635987 NR_038292 ENSG00000281706 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA chr7-6896 chr7 71811503 71811713 + 5.42 0.000 intron (NM_001363460, intron 4 of 5) intron (NM_001363460, intron 4 of 5) -503838 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr11-9835 chr11 72535515 72535725 + 5.42 0.000 Intergenic AluJr|SINE|Alu -35036 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr12-6038 chr12 110866965 110867175 + 5.42 0.000 intron (NM_152591, intron 4 of 11) SVA_F|Retroposon|SVA 20083 NM_001286243 160762 Hs.437141 NM_152591 ENSG00000173093 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding chr2-14118 chr2 201297946 201298156 + 5.42 0.000 intron (NR_110620, intron 11 of 13) L2a|LINE|L2 37515 NM_033356 841 Hs.599762 NM_001228 ENSG00000064012 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8 protein-coding chr8-4977 chr8 133412069 133412279 + 5.42 0.000 Intergenic AluJo|SINE|Alu -114870 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr2-12158 chr2 38571229 38571439 + 5.42 0.000 intron (NM_138394, intron 8 of 12) MER44A|DNA|TcMar-Tigger 31594 NM_138394 92906 Hs.445497 NM_138394 ENSG00000143889 HNRNPLL HNRPLL|SRRF heterogeneous nuclear ribonucleoprotein L like protein-coding chr16-5200 chr16 12324151 12324361 + 5.42 0.000 intron (NM_032167, intron 15 of 20) intron (NM_032167, intron 15 of 20) 347522 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr16-2059 chr16 71674269 71674479 + 5.42 0.000 intron (NM_015020, intron 9 of 18) AluSq2|SINE|Alu 24327 NR_033337 100379141 Hs.725116 NR_033337 ENSG00000263666 SNORA70D U70D small nucleolar RNA, H/ACA box 70D snoRNA chrX-4168 chrX 32265494 32265704 + 5.42 0.000 intron (NM_000109, intron 43 of 78) THE1C-int|LTR|ERVL-MaLR -110130 NM_004023 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr19-4090 chr19 14928068 14928278 + 5.42 0.000 Intergenic AluYk3|SINE|Alu -13316 NM_012377 26658 Hs.589620 NM_012377 ENSG00000127529 OR7C2 CIT-HSP-87M17|OR19-18|OR7C3 olfactory receptor family 7 subfamily C member 2 protein-coding chr10-7054 chr10 84800125 84800335 + 5.42 0.000 Intergenic Intergenic 375061 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr8-5086 chr8 46494942 46495152 + 5.42 0.000 Intergenic ALR/Alpha|Satellite|centr 122596 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr3-7881 chr3 128602418 128602628 + 5.42 0.000 Intergenic Intergenic -26437 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr14-3978 chr14 32398677 32398887 + 5.42 0.000 intron (NM_004274, intron 1 of 13) (TC)n|Simple_repeat|Simple_repeat 69484 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr3-5968 chr3 46881437 46881647 + 5.42 0.000 promoter-TSS (NM_001184744) promoter-TSS (NM_001184744) -707 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr10-7260 chr10 126397376 126397586 + 5.42 0.000 Intergenic Intergenic -9004 NM_001288973 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr1-15595 chr1 160716602 160716812 + 5.42 0.000 Intergenic Intergenic -4856 NM_001256030 962 Hs.243564 NM_001778 ENSG00000117091 CD48 BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48 CD48 molecule protein-coding chr13-4417 chr13 110360255 110360465 + 5.42 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 19402 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr1-11477 chr1 108902179 108902389 + 5.42 0.000 intron (NM_013296, intron 8 of 14) AluSc|SINE|Alu 25299 NM_001321038 29899 Hs.584901 NM_013296 ENSG00000121957 GPSM2 CMCS|DFNB82|LGN|PINS G protein signaling modulator 2 protein-coding chr1-15616 chr1 161952753 161952963 + 5.42 0.000 intron (NM_007348, intron 15 of 15) MER20B|DNA|hAT-Charlie 71607 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr17-5611 chr17 48602474 48602684 + 5.42 0.000 TTS (NR_033202) TTS (NR_033202) 2407 NM_018952 3216 Hs.98428 NM_018952 ENSG00000108511 HOXB6 HOX2|HOX2B|HU-2|Hox-2.2 homeobox B6 protein-coding chr16-6173 chr16 25189850 25190060 + 5.42 0.000 Intergenic Intergenic -26992 NM_001169 343 Hs.176658 NM_001169 ENSG00000103375 AQP8 AQP-8 aquaporin 8 protein-coding chr5-5114 chr5 101359123 101359333 + 5.42 0.000 Intergenic Intergenic -455946 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr6-6265 chr6 35205109 35205319 + 5.42 0.000 Intergenic Intergenic -8742 NM_152753 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding chr18-2984 chr18 23581117 23581327 + 5.42 0.000 intron (NM_000271, intron 1 of 24) intron (NM_000271, intron 1 of 24) 5284 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC|POGZ|SLC65A1 NPC intracellular cholesterol transporter 1 protein-coding chr4-4204 chr4 14417145 14417355 + 5.42 0.000 Intergenic Intergenic 305282 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr1-9852 chr1 64812167 64812377 + 5.42 0.000 intron (NM_001366165, intron 9 of 11) AluSx3|SINE|Alu 67197 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr9-4459 chr9 25715310 25715520 + 5.42 0.000 Intergenic MIRc|SINE|MIR -36557 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr6-7819 chr6 101035112 101035322 + 5.42 0.000 Intergenic Intergenic -153845 NM_001284271 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr8-7238 chr8 127673745 127673955 + 5.42 0.000 Intergenic AluY|SINE|Alu 60117 NR_117102 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLO7|CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility 11 ncRNA chr14-4079 chr14 64709643 64709853 + 5.42 0.000 intron (NM_001308147, intron 1 of 16) (TG)n|Simple_repeat|Simple_repeat 5324 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr5-3862 chr5 135320255 135320465 + 5.42 0.000 intron (NR_161235, intron 3 of 5) intron (NR_161235, intron 3 of 5) -72183 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr20-2539 chr20 35611072 35611282 + 5.42 0.000 Intergenic Intergenic -3615 NR_119376 80307 Hs.72222 NR_001442 ENSG00000088340 FER1L4 C20orf124 fer-1 like family member 4 (pseudogene) pseudo KN538372.1-3 KN538372.1 158702 158912 + 5.42 0.000 NA NA NA NA chr17-7685 chr17 31156482 31156692 + 5.42 0.000 intron (NM_001042492, intron 2 of 57) intron (NM_001042492, intron 2 of 57) 61610 NM_001128147 4763 Hs.113577 NM_000267 ENSG00000196712 NF1 NFNS|VRNF|WSS neurofibromin 1 protein-coding chr2-12545 chr2 67733706 67733916 + 5.42 0.000 Intergenic Intergenic 91751 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr3-10644 chr3 148246559 148246769 + 5.42 0.000 Intergenic Intergenic -34227 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr5-8712 chr5 143094203 143094413 + 5.42 0.000 intron (NR_146198, intron 17 of 22) HERVIP10FH-int|LTR|ERV1 -98192 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr22-3466 chr22 42983451 42983661 + 5.42 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) -23220 NM_001349970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr4-6900 chr4 14296028 14296238 + 5.42 0.000 Intergenic Intergenic 184165 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr17-5753 chr17 59769673 59769883 + 5.42 0.000 intron (NM_001329400, intron 4 of 9) intron (NM_001329400, intron 4 of 9) 62124 NM_001329399 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding chr9-7301 chr9 9794460 9794670 + 5.42 0.000 intron (NM_002839, intron 5 of 45) intron (NM_002839, intron 5 of 45) -4827 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chrX-4625 chrX 77301096 77301306 + 5.42 0.000 Intergenic HERVE_a-int|LTR|ERV1 -146188 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr22-3563 chr22 18111786 18111996 + 5.42 0.000 intron (NM_018943, intron 1 of 4) intron (NM_018943, intron 1 of 4) 1082 NM_001193414 51807 Hs.137400 NM_018943 ENSG00000183785 TUBA8 CDCBM8|TUBAL2 tubulin alpha 8 protein-coding chr7-6785 chr7 25133266 25133476 + 5.42 0.000 Intergenic Intergenic -8010 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr3-10451 chr3 133069501 133069711 + 5.42 0.000 intron (NM_001136469, intron 2 of 5) intron (NM_001136469, intron 2 of 5) 31318 NM_001136469 66000 Hs.191616 NM_023943 ENSG00000144868 TMEM108 CT124|RTLN transmembrane protein 108 protein-coding chr2-6580 chr2 228195138 228195348 + 5.42 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -13556 NM_001142644 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr3-7696 chr3 47369956 47370166 + 5.42 0.000 Intergenic AluSq|SINE|Alu -10960 NM_015466 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chrX-1074 chrX 134446406 134446616 + 5.42 0.000 Intergenic FLAM_A|SINE|Alu -13654 NM_000194 3251 Hs.412707 NM_000194 ENSG00000165704 HPRT1 HGPRT|HPRT hypoxanthine phosphoribosyltransferase 1 protein-coding chr1-16570 chr1 234684268 234684478 + 5.42 0.000 Intergenic MIRb|SINE|MIR 38084 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr1-7718 chr1 27047409 27047619 + 5.42 0.000 Intergenic Intergenic -34664 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr9-5904 chr9 132554976 132555186 + 5.42 0.000 intron (NM_207417, intron 6 of 6) intron (NM_207417, intron 6 of 6) -27525 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr22-2944 chr22 48090293 48090503 + 5.42 0.000 Intergenic MIR1_Amn|SINE|MIR -183966 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr5-7147 chr5 2643497 2643707 + 5.42 0.000 Intergenic Intergenic -68989 NR_145480 101234261 NR_145480 ENSG00000281560 LSINCT5 - long stress-induced non-coding transcript 5 ncRNA chr20-3773 chr20 20690298 20690508 + 5.42 0.000 intron (NM_020343, intron 1 of 39) intron (NM_020343, intron 1 of 39) 22241 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr4-8742 chr4 185716113 185716323 + 5.42 0.000 intron (NM_001145672, intron 1 of 20) intron (NM_001145672, intron 1 of 20) -59249 NM_001145674 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr16-6733 chr16 74456354 74456564 + 5.42 0.000 intron (NR_027264, intron 26 of 26) AluYj4|SINE|Alu -34989 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr3-9300 chr3 43042911 43043121 + 5.42 0.000 intron (NM_001129908, intron 2 of 4) intron (NM_001129908, intron 2 of 4) 63063 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chr3-5074 chr3 43346100 43346310 + 5.42 0.000 TTS (NR_046757) TTS (NR_046757) 5757 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chr2-11914 chr2 24597334 24597544 + 5.42 0.000 intron (NM_001362950, intron 3 of 23) intron (NM_001362950, intron 3 of 23) 12962 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr9-7325 chr9 12652837 12653047 + 5.42 0.000 Intergenic L1MC4|LINE|L1 -40443 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr12-7396 chr12 57434702 57434912 + 5.42 0.000 promoter-TSS (NM_005538) promoter-TSS (NM_005538) 23 NM_005538 3626 Hs.632722 NM_005538 ENSG00000175189 INHBC IHBC inhibin subunit beta C protein-coding chr8-2229 chr8 23761554 23761764 + 5.42 0.000 Intergenic Intergenic -55061 NM_001136271 137814 Hs.532654 NM_001136271 ENSG00000180053 NKX2-6 CSX2|CTHM|NKX2F|NKX4-2 NK2 homeobox 6 protein-coding chr2-5622 chr2 188629104 188629314 + 5.42 0.000 Intergenic Intergenic 160914 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA chr1-10732 chr1 197174464 197174674 + 5.42 0.000 intron (NM_194314, intron 8 of 9) intron (NM_194314, intron 8 of 9) 25973 NM_194314 360023 Hs.529439 NM_194314 ENSG00000177888 ZBTB41 FRBZ1|ZNF924 zinc finger and BTB domain containing 41 protein-coding chr16-5691 chr16 74768450 74768660 + 5.42 0.000 intron (NM_024306, intron 1 of 6) intron (NM_024306, intron 1 of 6) 6265 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr12-3572 chr12 27849395 27849605 + 5.42 0.000 Intergenic L1PA10|LINE|L1 69267 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr12-6266 chr12 44616066 44616276 + 5.42 0.000 intron (NM_006159, intron 14 of 20) intron (NM_006159, intron 14 of 20) 259490 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr13-3809 chr13 46183192 46183402 + 5.42 0.000 Intergenic Intergenic -1120 NM_002298 3936 Hs.381099 NM_002298 ENSG00000136167 LCP1 CP64|HEL-S-37|L-PLASTIN|LC64P|LPL|PLS2 lymphocyte cytosolic protein 1 protein-coding chr1-7965 chr1 193335752 193335962 + 5.42 0.000 intron (NR_125789, intron 1 of 3) intron (NR_125789, intron 1 of 3) 31112 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chrX-4276 chrX 41606556 41606766 + 5.42 0.000 intron (NM_003688, intron 12 of 26) Charlie13a|DNA|hAT-Charlie -82312 NM_005300 2857 Hs.495989 NM_005300 ENSG00000171659 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding chr5-8848 chr5 151811808 151812018 + 5.42 0.000 3' UTR (NM_005754, exon 12 of 12) 3' UTR (NM_005754, exon 12 of 12) -39737 NR_132345 100652758 Hs.587054 NM_001278082 LOC100652758 - uncharacterized LOC100652758 ncRNA chr8-6775 chr8 93356244 93356454 + 5.42 0.000 intron (NR_033858, intron 10 of 10) intron (NR_033858, intron 10 of 10) -189499 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr3-11112 chr3 186129419 186129629 + 5.42 0.000 Intergenic Intergenic -20435 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr12-5959 chr12 83746678 83746888 + 5.42 0.000 Intergenic Intergenic 1059628 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-11183 chr2 153209010 153209220 + 5.42 0.000 Intergenic AluYk3|SINE|Alu 269647 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr3-11151 chr3 189182328 189182538 + 5.42 0.000 intron (NM_198485, intron 1 of 5) intron (NM_198485, intron 1 of 5) 10462 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr10-8250 chr10 74740262 74740472 + 5.42 0.000 Intergenic Intergenic -84888 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr9-3990 chr9 16558944 16559154 + 5.42 0.000 intron (NM_001317939, intron 3 of 6) intron (NM_001317939, intron 3 of 6) -167765 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr18-1036 chr18 2314758 2314968 + 5.42 0.000 Intergenic Intergenic 256642 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr1-15406 chr1 151823113 151823323 + 5.42 0.000 intron (NM_005060, intron 2 of 10) intron (NM_005060, intron 2 of 10) 2878 NM_001001523 6097 Hs.256022 NM_005060 ENSG00000143365 RORC IMD42|NR1F3|RORG|RZR-GAMMA|RZRG|TOR RAR related orphan receptor C protein-coding chr3-7588 chr3 10432752 10432962 + 5.42 0.000 intron (NM_001001331, intron 2 of 22) intron (NM_001001331, intron 2 of 22) -38295 NR_030614 100126334 NR_030614 ENSG00000216135 MIR885 MIRN885|hsa-mir-885|mir-885 microRNA 885 ncRNA chr13-3342 chr13 71412263 71412473 + 5.42 0.000 Intergenic L1MA4A|LINE|L1 397227 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr3-10147 chr3 114878533 114878743 + 5.42 0.000 intron (NM_001164343, intron 3 of 11) intron (NM_001164343, intron 3 of 11) 5605 NR_126422 104413890 Hs.612732 NR_126422 ENSG00000239946 ZBTB20-AS3 - ZBTB20 antisense RNA 3 ncRNA chr13-2118 chr13 90594936 90595146 + 5.42 0.000 Intergenic Intergenic 101753 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chrX-2028 chrX 16493906 16494116 + 5.42 0.000 Intergenic AluYk4|SINE|Alu 133074 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr20-3090 chr20 21438811 21439021 + 5.42 0.000 Intergenic AluSx|SINE|Alu -41390 NM_033176 644524 NM_033176 ENSG00000125816 NKX2-4 NKX2.4|NKX2D NK2 homeobox 4 protein-coding chr1-11149 chr1 236207533 236207743 + 5.42 0.000 intron (NM_003272, intron 6 of 6) MIR|SINE|MIR 65099 NM_003272 7107 Hs.498160 NM_003272 ENSG00000077585 GPR137B TM7SF1 G protein-coupled receptor 137B protein-coding chr16-6958 chr16 86027166 86027376 + 5.42 0.000 Intergenic Intergenic 108924 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr15-3903 chr15 25355729 25355939 + 5.42 0.000 intron (NM_001354549, intron 6 of 9) intron (NM_001354549, intron 6 of 9) 77491 NR_001289 338429 NR_001289 ENSG00000239169 SNORD109B HBII-438B small nucleolar RNA, C/D box 109B snoRNA chr11-5789 chr11 5504486 5504696 + 5.42 0.000 intron (NM_001005567, intron 1 of 4) intron (NM_001005567, intron 1 of 4) 1061 NR_038321 282763 Hs.690458 NM_001005567 ENSG00000167355 OR51B5 HOR5'Beta5|OR11-37 olfactory receptor family 51 subfamily B member 5 protein-coding chr12-6977 chr12 29129944 29130154 + 5.42 0.000 Intergenic L1MC1|LINE|L1 -19229 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr8-6869 chr8 100425039 100425249 + 5.42 0.000 Intergenic Intergenic 42381 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr11-9879 chr11 74305146 74305356 + 5.42 0.000 intron (NR_110031, intron 1 of 11) L2c|LINE|L2 -6111 NR_120556 101928580 Hs.569025 NR_120556 ENSG00000246211 P4HA3-AS1 - P4HA3 antisense RNA 1 ncRNA chr12-4567 chr12 29380963 29381173 + 5.42 0.000 intron (NM_016570, intron 1 of 13) intron (NM_016570, intron 1 of 13) 104 NM_016570 51290 Hs.339453 NM_016570 ENSG00000087502 ERGIC2 CDA14|Erv41|PTX1|cd002 ERGIC and golgi 2 protein-coding chr1-15569 chr1 159196309 159196519 + 5.42 0.000 non-coding (NR_037870, exon 4 of 4) non-coding (NR_037870, exon 4 of 4) 6008 NR_037870 100131825 Hs.701271 NR_037870 CADM3-AS1 - CADM3 antisense RNA 1 ncRNA chr7-4772 chr7 77552195 77552405 + 5.42 0.000 intron (NM_001131009, intron 1 of 16) intron (NM_001131009, intron 1 of 16) 14257 NM_001131009 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chr22-3879 chr22 34784063 34784273 + 5.42 0.000 intron (NR_138042, intron 3 of 4) intron (NR_138042, intron 3 of 4) 213748 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr16-5609 chr16 57331276 57331486 + 5.42 0.000 Intergenic L1MB7|LINE|L1 -27402 NM_002990 6367 Hs.534347 NM_002990 ENSG00000102962 CCL22 A-152E5.1|ABCD-1|DC/B-CK|MDC|SCYA22|STCP-1 C-C motif chemokine ligand 22 protein-coding chr11-5323 chr11 57545882 57546092 + 5.42 0.000 exon (NM_001105565, exon 4 of 7) exon (NM_001105565, exon 4 of 7) 3346 NM_001105565 219537 Hs.68756 NM_001105565 ENSG00000214872 SMTNL1 CHASM smoothelin like 1 protein-coding chr7-6726 chr7 4855583 4855793 + 5.42 0.000 intron (NM_018059, intron 2 of 14) L1MEd|LINE|L1 6342 NM_020144 56903 Hs.487409 NM_020144 ENSG00000218823 PAPOLB PAPT|TPAP poly(A) polymerase beta protein-coding chr1-16289 chr1 214497708 214497918 + 5.42 0.000 intron (NM_005401, intron 1 of 18) L1ME3G|LINE|L1 53789 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr5-7046 chr5 168676850 168677060 + 5.42 0.000 intron (NM_003062, intron 32 of 35) intron (NM_003062, intron 32 of 35) -29972 NR_130737 101927969 Hs.661903 NR_130737 LOC101927969 - uncharacterized LOC101927969 ncRNA chr20-3071 chr20 9184587 9184797 + 5.42 0.000 intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) -32698 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr1-14679 chr1 61369876 61370086 + 5.42 0.000 intron (NM_001134673, intron 6 of 10) intron (NM_001134673, intron 6 of 10) -116463 NR_104180 645030 Hs.632410 NR_104180 ENSG00000237853 NFIA-AS1 - NFIA antisense RNA 1 ncRNA chr17-6528 chr17 34509883 34510093 + 5.42 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 69381 NR_160787 400591 Hs.514090 NM_207454 C17orf102 - chromosome 17 open reading frame 102 ncRNA chr18-3216 chr18 46867017 46867227 + 5.42 0.000 intron (NR_136685, intron 1 of 11) intron (NR_136685, intron 1 of 11) 50385 NM_001324057 9063 Hs.57769 NM_004671 ENSG00000078043 PIAS2 ARIP3|DIP|MIZ1|PIASX|SIZ2|ZMIZ4 protein inhibitor of activated STAT 2 protein-coding chr2-7950 chr2 61703178 61703388 + 5.42 0.000 Intergenic Intergenic 150777 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr20-3818 chr20 23768437 23768647 + 5.42 0.000 Intergenic L1MC4|LINE|L1 -17605 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr6-7815 chr6 100672413 100672623 + 5.42 0.000 intron (NM_006828, intron 14 of 41) LTR67B|LTR|ERVL 208811 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr7-6419 chr7 156239328 156239538 + 5.42 0.000 Intergenic Intergenic 206155 NR_038232 285889 Hs.407095 NR_038232 ENSG00000182648 LOC285889 - uncharacterized LOC285889 ncRNA chr22-3800 chr22 30087793 30088003 + 5.42 0.000 intron (NM_001329457, intron 2 of 11) MIRb|SINE|MIR 7434 NM_001329457 150280 Hs.120391 NM_152510 ENSG00000176635 HORMAD2 CT46.2 HORMA domain containing 2 protein-coding chr8-5388 chr8 24156028 24156238 + 5.42 0.000 Intergenic Intergenic -137907 NM_021777 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr3-9619 chr3 58032536 58032746 + 5.42 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 24219 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr10-8544 chr10 93413127 93413337 + 5.42 0.000 intron (NM_013451, intron 5 of 53) intron (NM_013451, intron 5 of 53) 69102 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr22-2451 chr22 20217184 20217394 + 5.42 0.000 Intergenic (GCACAT)n|Simple_repeat|Simple_repeat 10957 NR_026919 150197 Hs.635544 NM_152508 ENSG00000236499 LINC00896 - long intergenic non-protein coding RNA 896 ncRNA chr4-6524 chr4 167990339 167990549 + 5.42 0.000 Intergenic Intergenic -102093 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chrX-4305 chrX 43814119 43814329 + 5.42 0.000 intron (NM_000898, intron 3 of 14) intron (NM_000898, intron 3 of 14) 68226 NM_000898 4129 Hs.654473 NM_000898 ENSG00000069535 MAOB - monoamine oxidase B protein-coding chrX-5087 chrX 126527690 126527900 + 5.42 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 25019 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr3-11033 chr3 182631989 182632199 + 5.42 0.000 Intergenic Intergenic -124970 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr3-4947 chr3 9743239 9743449 + 5.42 0.000 intron (NR_160918, intron 8 of 14) intron (NR_160918, intron 8 of 14) -6600 NM_001354651 4968 Hs.380271 NM_002542 ENSG00000114026 OGG1 HMMH|HOGG1|MUTM|OGH1 8-oxoguanine DNA glycosylase protein-coding chr1-8934 chr1 7809825 7810035 + 5.42 0.000 exon (NM_001289863, exon 12 of 23) exon (NM_001289863, exon 12 of 23) 25501 NM_001289861 8863 Hs.162200 NM_016831 ENSG00000049246 PER3 FASPS3|GIG13 period circadian regulator 3 protein-coding chr5-7779 chr5 63142825 63143035 + 5.42 0.000 Intergenic L1MC3|LINE|L1 564111 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr22-3157 chr22 27369277 27369487 + 5.42 0.000 Intergenic AluSx4|SINE|Alu 58731 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr16-5514 chr16 20019634 20019844 + 5.42 0.000 Intergenic AluJr4|SINE|Alu 54039 NM_001002911 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr9-6845 chr9 71011837 71012047 + 5.42 0.000 intron (NM_001366143, intron 1 of 25) AluJb|SINE|Alu 109679 NM_001366148 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr1-13496 chr1 4062943 4063153 + 5.42 0.000 Intergenic MIRb|SINE|MIR -114068 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr9-6719 chr9 6537028 6537238 + 5.42 0.000 intron (NM_000170, intron 22 of 24) AluJb|SINE|Alu 108559 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr16-4026 chr16 951914 952124 + 5.42 0.000 intron (NM_001352017, intron 2 of 11) intron (NM_001352017, intron 2 of 11) 18965 NM_001352021 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr12-7991 chr12 111501384 111501594 + 5.42 0.000 intron (NR_132311, intron 14 of 23) intron (NR_132311, intron 14 of 23) 66627 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chrX-2154 chrX 35759281 35759491 + 5.42 0.000 Intergenic MSTA|LTR|ERVL-MaLR -38956 NM_001099921 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr8-5808 chr8 530606 530816 + 5.42 0.000 intron (NM_001256113, intron 1 of 3) L1M3de|LINE|L1 14134 NM_001256113 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chrX-1864 chrX 118460312 118460522 + 5.42 0.000 Intergenic MER2|DNA|TcMar-Tigger -35492 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr1-13722 chr1 15476036 15476246 + 5.42 0.000 promoter-TSS (NM_015849) promoter-TSS (NM_015849) 37 NM_015849 51032 Hs.631871 NM_015849 ENSG00000215704 CELA2B ELA2B chymotrypsin like elastase 2B protein-coding chr4-8222 chr4 137029913 137030123 + 5.42 0.000 intron (NR_149105, intron 2 of 3) L1PA15|LINE|L1 -163738 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr6-6764 chr6 3304658 3304868 + 5.42 0.000 intron (NM_021945, intron 5 of 10) intron (NM_021945, intron 5 of 10) 45816 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr2-9616 chr2 3255898 3256108 + 5.42 0.000 intron (NM_001330531, intron 3 of 7) intron (NM_001330531, intron 3 of 7) 121815 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr5-6438 chr5 160349335 160349545 + 5.42 0.000 exon (NM_031908, exon 3 of 3) exon (NM_031908, exon 3 of 3) -9848 NR_131769 79616 Hs.14070 NM_024565 ENSG00000135083 CCNJL - cyclin J like protein-coding chr17-7550 chr17 18946142 18946352 + 5.42 0.000 Intergenic MER21A|LTR|ERVL -4429 NM_001282417 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr5-5639 chr5 155684622 155684832 + 5.42 0.000 Intergenic L1MA4A|LINE|L1 -642030 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr9-7280 chr9 7294765 7294975 + 5.42 0.000 Intergenic MER33|DNA|hAT-Charlie 504908 NM_001318059 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chrX-4142 chrX 28675827 28676037 + 5.42 0.000 intron (NM_014271, intron 1 of 10) intron (NM_014271, intron 1 of 10) 88486 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr13-3104 chr13 53831395 53831605 + 5.42 0.000 intron (NR_047488, intron 1 of 5) intron (NR_047488, intron 1 of 5) 16081 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr19-5208 chr19 27630656 27630866 + 5.42 0.000 Intergenic ALR/Alpha|Satellite|centr -162670 NR_146735 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA chr1-16261 chr1 211885151 211885361 + 5.42 0.000 Intergenic LTR16|LTR|ERVL 54295 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr6-7199 chr6 39128040 39128250 + 5.42 0.000 Intergenic L2c|LINE|L2 -12959 NM_001304793 55776 Hs.58382 NM_018322 ENSG00000112167 SAYSD1 C6orf64 SAYSVFN motif domain containing 1 protein-coding chr17-5277 chr17 20554285 20554495 + 5.42 0.000 Intergenic Intergenic -25334 NM_001190790 256223 Hs.131916 NM_001190790 ENSG00000214819 CDRT15L2 - CMT1A duplicated region transcript 15 like 2 protein-coding chr3-10409 chr3 130470933 130471143 + 5.42 0.000 intron (NM_153264, intron 39 of 39) intron (NM_153264, intron 39 of 39) -89296 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr10-4791 chr10 6524732 6524942 + 5.42 0.000 intron (NM_001323265, intron 1 of 17) intron (NM_001323265, intron 1 of 17) 55439 NM_001323266 5588 Hs.498570 NM_006257 ENSG00000065675 PRKCQ PRKCT|nPKC-theta protein kinase C theta protein-coding chr3-7664 chr3 37306360 37306570 + 5.42 0.000 intron (NM_001172713, intron 11 of 22) intron (NM_001172713, intron 11 of 22) -62270 NR_149029 152048 Hs.596176 NM_152532 ENSG00000270194 LOC152048 - uncharacterized FLJ31715 ncRNA chr2-10881 chr2 65812716 65812926 + 5.42 0.000 Intergenic Intergenic -380222 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr10-7565 chr10 17059157 17059367 + 5.42 0.000 intron (NM_001081, intron 22 of 66) intron (NM_001081, intron 22 of 66) 70555 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr13-2967 chr13 60156783 60156993 + 5.42 0.000 intron (NM_001258369, intron 1 of 26) intron (NM_001258369, intron 1 of 26) 7040 NM_001258366 81624 Hs.283127 NM_030932 ENSG00000139734 DIAPH3 AN|AUNA1|DIA2|DRF3|NSDAN|diap3|mDia2 diaphanous related formin 3 protein-coding chr6-5002 chr6 108770351 108770561 + 5.42 0.000 TTS (NR_033376) TTS (NR_033376) 18802 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr10-9156 chr10 128681611 128681821 + 5.42 0.000 Intergenic Intergenic -231117 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr7-8977 chr7 99967322 99967532 + 5.42 0.000 intron (NM_001185, intron 3 of 3) intron (NM_001185, intron 3 of 3) 8604 NM_001185 563 Hs.546239 NM_001185 ENSG00000160862 AZGP1 ZA2G|ZAG alpha-2-glycoprotein 1, zinc-binding protein-coding chr19-6827 chr19 42161260 42161470 + 5.42 0.000 Intergenic Intergenic -27852 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr4-6503 chr4 157846953 157847163 + 5.42 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 274568 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr2-13965 chr2 188097038 188097248 + 5.42 0.000 intron (NR_126396, intron 2 of 2) L2|LINE|L2 190548 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr1-8164 chr1 16921969 16922179 + 5.42 0.000 exon (NM_014675, exon 1 of 37) exon (NM_014675, exon 1 of 37) 143 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr7-4127 chr7 55408848 55409058 + 5.42 0.000 intron (NM_018697, intron 5 of 8) AluSc8|SINE|Alu 43505 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr5-7239 chr5 10294470 10294680 + 5.42 0.000 intron (NM_138809, intron 1 of 5) AluJo|SINE|Alu 13327 NM_138809 134147 Hs.192586 NM_138809 ENSG00000164237 CMBL JS-1 carboxymethylenebutenolidase homolog protein-coding chr6-7068 chr6 33498089 33498299 + 5.42 0.000 Intergenic MER52C|LTR|ERV1 43618 NM_152735 221504 Hs.591805 NM_152735 ENSG00000213588 ZBTB9 ZNF919 zinc finger and BTB domain containing 9 protein-coding chr15-3698 chr15 42454809 42455019 + 5.42 0.000 intron (NM_001366845, intron 4 of 21) intron (NM_001366845, intron 4 of 21) 2653 NM_001284306 64397 Hs.511143 NM_022473 ENSG00000103994 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding chr14-3887 chr14 92863287 92863497 + 5.42 0.000 Intergenic Intergenic 44090 NR_135253 101929002 Hs.639356 NR_135253 ENSG00000258499 LINC02287 - long intergenic non-protein coding RNA 2287 ncRNA chr13-4431 chr13 111088324 111088534 + 5.42 0.000 Intergenic MER65A|LTR|ERV1 -7409 NR_120415 101927802 Hs.559193 NR_120415 LINC00368 - long intergenic non-protein coding RNA 368 ncRNA chr1-16329 chr1 217673734 217673944 + 5.42 0.000 intron (NM_138796, intron 4 of 10) intron (NM_138796, intron 4 of 10) 42495 NM_138796 128153 Hs.171130 NM_138796 ENSG00000162814 SPATA17 IQCH|MSRG-11|MSRG11 spermatogenesis associated 17 protein-coding chr12-5937 chr12 75628922 75629132 + 5.42 0.000 Intergenic Intergenic -117418 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr3-4531 chr3 122942989 122943199 + 5.42 0.000 intron (NR_046079, intron 4 of 22) intron (NR_046079, intron 4 of 22) 33040 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr4-8155 chr4 129015336 129015546 + 5.42 0.000 intron (NM_144643, intron 5 of 20) L1PA13|LINE|L1 78098 NM_001300898 132320 Hs.654690 NM_144643 ENSG00000151466 SCLT1 CAP-1A|CAP1A sodium channel and clathrin linker 1 protein-coding chr17-8240 chr17 65403675 65403885 + 5.42 0.000 Intergenic Intergenic -53761 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr2-7083 chr2 170817853 170818063 + 5.42 0.000 intron (NM_013445, intron 1 of 6) CpG 1071 NM_000817 2571 Hs.420036 NM_000817 ENSG00000128683 GAD1 CPSQ1|GAD|SCP glutamate decarboxylase 1 protein-coding chr17-7553 chr17 18976485 18976695 + 5.42 0.000 intron (NM_001039999, intron 5 of 5) MIRc|SINE|MIR 24425 NM_152351 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr6-3473 chr6 3768387 3768597 + 5.42 0.000 Intergenic Intergenic -16480 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr4-6056 chr4 5927270 5927480 + 5.42 0.000 Intergenic L2a|LINE|L2 -4047 NR_039608 100616201 NR_039608 ENSG00000263631 MIR378D1 mir-378d-1 microRNA 378d-1 ncRNA chr15-2757 chr15 26419794 26420004 + 5.42 0.000 Intergenic L1PREC2|LINE|L1 209191 NR_103801 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr8-2410 chr8 80843888 80844098 + 5.42 0.000 intron (NM_001033723, intron 1 of 8) intron (NM_001033723, intron 1 of 8) 30475 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr10-6505 chr10 59568366 59568576 + 5.42 0.000 Intergenic L1ME1|LINE|L1 141420 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr12-6583 chr12 122714783 122714993 + 5.42 0.000 3' UTR (NM_006018, exon 1 of 1) 3' UTR (NM_006018, exon 1 of 1) 1923 NM_006018 8843 Hs.458425 NM_006018 ENSG00000255398 HCAR3 GPR109B|HCA3|HM74|PUMAG|Puma-g hydroxycarboxylic acid receptor 3 protein-coding chr2-13772 chr2 171614857 171615067 + 5.42 0.000 Intergenic L1PB4|LINE|L1 -72507 NM_001271790 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr16-4390 chr16 49887977 49888187 + 5.42 0.000 Intergenic AluSz|SINE|Alu -30163 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr15-5164 chr15 92278967 92279177 + 5.42 0.000 Intergenic ERVL-E-int|LTR|ERVL -114809 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr9-6763 chr9 22347656 22347866 + 5.42 0.000 Intergenic AluSx4|SINE|Alu -99063 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr1-16312 chr1 216568542 216568752 + 5.42 0.000 intron (NM_001243505, intron 3 of 6) intron (NM_001243505, intron 3 of 6) -145199 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr11-7782 chr11 91505101 91505311 + 5.42 0.000 Intergenic L1PA4|LINE|L1 -636004 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr22-3865 chr22 33559986 33560196 + 5.42 0.000 intron (NM_133642, intron 6 of 14) MIR|SINE|MIR -123422 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr3-8915 chr3 13004376 13004586 + 5.42 0.000 intron (NM_001134382, intron 1 of 13) L2c|LINE|L2 -17380 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chrX-4576 chrX 70929771 70929981 + 5.42 0.000 exon (NM_032803, exon 2 of 12) exon (NM_032803, exon 2 of 12) 1220 NM_001048164 84889 Hs.175220 NM_032803 ENSG00000165349 SLC7A3 ATRC3|CAT-3|CAT3 solute carrier family 7 member 3 protein-coding chr15-4099 chr15 75385670 75385880 + 5.42 0.000 intron (NM_015477, intron 16 of 20) intron (NM_015477, intron 16 of 20) -17148 NM_001256496 4123 Hs.26232 NM_006715 ENSG00000140400 MAN2C1 MAN6A8|MANA|MANA1 mannosidase alpha class 2C member 1 protein-coding chr7-9594 chr7 148495727 148495937 + 5.42 0.000 Intergenic Intergenic -94934 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr5-3684 chr5 178258056 178258266 + 5.42 0.000 intron (NM_173465, intron 12 of 28) AluJo|SINE|Alu -25339 NM_001278346 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr9-3498 chr9 19216290 19216500 + 5.42 0.000 Intergenic AluSq2|SINE|Alu -14298 NM_001330640 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr1-16593 chr1 236681684 236681894 + 5.42 0.000 Intergenic L1MEc|LINE|L1 -4665 NM_001103 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr11-6254 chr11 57254601 57254811 + 5.42 0.000 Intergenic L1MB8|LINE|L1 -17253 NM_005161 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr5-7505 chr5 35754313 35754523 + 5.42 0.000 intron (NM_024867, intron 24 of 36) MER67C|LTR|ERV1 -102473 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr6-6671 chr6 163993317 163993527 + 5.42 0.000 Intergenic Intergenic -321938 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr9-5205 chr9 73196012 73196222 + 5.42 0.000 Intergenic MSTA|LTR|ERVL-MaLR 44252 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr3-10737 chr3 155553127 155553337 + 5.42 0.000 intron (NM_001349252, intron 9 of 24) AluSz6|SINE|Alu 67429 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr17-7881 chr17 43036388 43036598 + 5.42 0.000 Intergenic Intergenic 11262 NM_005440 8153 Hs.603111 NM_005440 ENSG00000108830 RND2 ARHN|RHO7|RhoN Rho family GTPase 2 protein-coding chr15-4889 chr15 76334049 76334259 + 5.42 0.000 Intergenic Intergenic -2619 NM_145805 64843 Hs.444677 NM_145805 ENSG00000159556 ISL2 - ISL LIM homeobox 2 protein-coding chr4-6797 chr4 7640637 7640847 + 5.42 0.000 intron (NM_020777, intron 4 of 26) intron (NM_020777, intron 4 of 26) -113348 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr9-2471 chr9 37027763 37027973 + 5.42 0.000 intron (NM_001280548, intron 1 of 8) CpG 6400 NM_016734 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr1-10583 chr1 175603351 175603561 + 5.42 0.000 intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 140139 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr9-7705 chr9 72674446 72674656 + 5.42 0.000 intron (NM_138691, intron 5 of 23) MER5A|DNA|hAT-Charlie 152750 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr4-3711 chr4 61712143 61712353 + 5.42 0.000 intron (NM_001371342, intron 4 of 20) AluJb|SINE|Alu 449517 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr14-4380 chr14 28123911 28124121 + 5.42 0.000 Intergenic AluSx|SINE|Alu -450795 NR_148992 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA chr4-2951 chr4 103313262 103313472 + 5.42 0.000 Intergenic L1M4c|LINE|L1 -111675 NR_125925 101929448 Hs.570839 NR_125925 ENSG00000248740 LINC02428 - long intergenic non-protein coding RNA 2428 ncRNA chr3-8848 chr3 9267060 9267270 + 5.42 0.000 Intergenic Intergenic 17409 NR_146969 101927440 NR_146969 ENSG00000235830 SRGAP3-AS4 - SRGAP3 antisense RNA 4 ncRNA chr9-5819 chr9 129391738 129391948 + 5.42 0.000 Intergenic Intergenic 54920 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr20-1412 chr20 33185133 33185343 + 5.42 0.000 Intergenic SVA_D|Retroposon|SVA -8367 NR_026760 317716 Hs.434194 NM_173859 ENSG00000183566 BPIFA4P BASE BPI fold containing family A member 4, pseudogene pseudo chr9-5797 chr9 128804528 128804738 + 5.42 0.000 intron (NM_018201, intron 9 of 11) AluYj4|SINE|Alu -13867 NM_004435 2021 Hs.745161 NM_004435 ENSG00000167136 ENDOG - endonuclease G protein-coding chr11-10182 chr11 94588611 94588821 + 5.42 0.000 intron (NM_152431, intron 7 of 19) intron (NM_152431, intron 7 of 19) 21348 NM_152431 143689 Hs.660188 NM_152431 ENSG00000134627 PIWIL4 HIWI2|MIWI2 piwi like RNA-mediated gene silencing 4 protein-coding chr5-8289 chr5 113975043 113975253 + 5.42 0.000 Intergenic L3|LINE|CR1 -386922 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr5-6251 chr5 94366383 94366593 + 5.42 0.000 intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) 252116 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr11-8970 chr11 20736067 20736277 + 5.42 0.000 intron (NM_201551, intron 2 of 18) L2a|LINE|L2 66586 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr20-2806 chr20 57116236 57116446 + 5.42 0.000 Intergenic Intergenic -97355 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr4-6235 chr4 62809496 62809706 + 5.42 0.000 Intergenic Intergenic -647836 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr1-11154 chr1 236729980 236730190 + 5.42 0.000 intron (NM_001278344, intron 6 of 22) MIR|SINE|MIR 43586 NM_001278343 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr2-14441 chr2 222844475 222844685 + 5.42 0.000 Intergenic MER5A1|DNA|hAT-Charlie -16456 NM_001354159 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr3-5016 chr3 27881656 27881866 + 5.42 0.000 Intergenic Intergenic -47625 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr10-4925 chr10 23994281 23994491 + 5.42 0.000 intron (NM_001098500, intron 1 of 18) intron (NM_001098500, intron 1 of 18) -214405 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chrX-4053 chrX 18889465 18889675 + 5.42 0.000 promoter-TSS (NR_029379) promoter-TSS (NR_029379) -726 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr4-7821 chr4 99813655 99813865 + 5.42 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -3067 NM_001306151 27071 Hs.436271 NM_014395 ENSG00000070190 DAPP1 BAM32 dual adaptor of phosphotyrosine and 3-phosphoinositides 1 protein-coding chr7-6322 chr7 141541899 141542109 + 5.42 0.000 Intergenic LTR16E2|LTR|ERVL -9406 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr5-7413 chr5 27188408 27188618 + 5.42 0.000 Intergenic Intergenic -149927 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr9-6552 chr9 117878553 117878763 + 5.42 0.000 Intergenic LTR33B|LTR|ERVL 174255 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr14-3631 chr14 66673909 66674119 + 5.42 0.000 intron (NM_001024218, intron 1 of 21) L1MA5|LINE|L1 166607 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr1-13062 chr1 176504649 176504859 + 5.42 0.000 intron (NM_021936, intron 1 of 4) MLT1I|LTR|ERVL-MaLR 41579 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr4-6707 chr4 3657250 3657460 + 5.42 0.000 Intergenic MIR|SINE|MIR 20500 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr10-6059 chr10 128293673 128293883 + 5.42 0.000 intron (NR_120619, intron 2 of 5) intron (NR_120619, intron 2 of 5) 7828 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr5-4555 chr5 20443138 20443348 + 5.42 0.000 intron (NM_001349558, intron 1 of 15) intron (NM_001349558, intron 1 of 15) 132470 NM_001291956 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr6-6115 chr6 156129424 156129634 + 5.42 0.000 Intergenic Intergenic 182732 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr2-13179 chr2 120578865 120579075 + 5.42 0.000 Intergenic Intergenic -112621 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr15-5031 chr15 83320392 83320602 + 5.42 0.000 Intergenic Intergenic -35833 NM_001717 646 Hs.459153 NM_001717 ENSG00000169594 BNC1 BNC|BSN1|HsT19447 basonuclin 1 protein-coding chr3-10212 chr3 121432808 121433018 + 5.42 0.000 intron (NM_199420, intron 29 of 29) intron (NM_199420, intron 29 of 29) 113075 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chr8-7048 chr8 113878508 113878718 + 5.42 0.000 Intergenic Intergenic -441674 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr11-7154 chr11 127459863 127460073 + 5.42 0.000 Intergenic Intergenic 188898 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr3-9272 chr3 41266053 41266263 + 5.42 0.000 intron (NR_136342, intron 33 of 34) intron (NR_136342, intron 33 of 34) 66653 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr2-13788 chr2 172773371 172773581 + 5.42 0.000 intron (NM_007023, intron 1 of 30) intron (NM_007023, intron 1 of 30) -37270 NR_026995 91149 Hs.711021 NR_026995 ENSG00000228016 RAPGEF4-AS1 - RAPGEF4 antisense RNA 1 ncRNA chrX-5164 chrX 132400193 132400403 + 5.42 0.000 intron (NM_001170704, intron 3 of 8) intron (NM_001170704, intron 3 of 8) 13277 NM_001170702 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr12-8168 chr12 121561353 121561563 + 5.42 0.000 intron (NM_001005366, intron 4 of 22) intron (NM_001005366, intron 4 of 22) 18788 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr15-5156 chr15 91926987 91927197 + 5.42 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 72788 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr6-4221 chr6 4640668 4640878 + 5.42 0.000 Intergenic MER20|DNA|hAT-Charlie 30208 NR_122107 497048 Hs.591355 NM_001011540 ENSG00000205444 KU-MEL-3 - uncharacterized LOC497048 ncRNA chr5-6130 chr5 32978722 32978932 + 5.42 0.000 Intergenic MIRc|SINE|MIR 31384 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr2-12971 chr2 104618977 104619187 + 5.42 0.000 Intergenic Intergenic -108573 NR_110113 101927360 Hs.650324 NR_110113 ENSG00000234781 LINC01103 - long intergenic non-protein coding RNA 1103 ncRNA chr11-8026 chr11 16346107 16346317 + 5.42 0.000 intron (NM_001367872, intron 3 of 16) intron (NM_001367872, intron 3 of 16) 10334 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr16-3879 chr16 72558252 72558462 + 5.42 0.000 intron (NR_159370, intron 2 of 5) L1MCc|LINE|L1 106613 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr15-4491 chr15 51077208 51077418 + 5.42 0.000 intron (NM_001311175, intron 1 of 1) intron (NM_001311175, intron 1 of 1) 17593 NM_001311175 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr6-6941 chr6 16229846 16230056 + 5.42 0.000 Intergenic HERV3-int|LTR|ERV1 -8636 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr2-9704 chr2 52951858 52952068 + 5.42 0.000 Intergenic Intergenic -249348 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr9-8225 chr9 109638741 109638951 + 5.42 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -1942 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr5-8884 chr5 155200697 155200907 + 5.42 0.000 Intergenic L1PBa1|LINE|L1 187047 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr3-9948 chr3 90412461 90412671 + 5.42 0.000 Intergenic ALR/Alpha|Satellite|centr 1304945 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr1-14266 chr1 36998870 36999080 + 5.42 0.000 intron (NM_000831, intron 1 of 15) intron (NM_000831, intron 1 of 15) 35540 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr2-14047 chr2 195285994 195286204 + 5.42 0.000 Intergenic Intergenic -370859 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr1-15240 chr1 112182905 112183115 + 5.42 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 192474 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr18-1088 chr18 49023740 49023950 + 5.42 0.000 intron (NR_148999, intron 1 of 4) intron (NR_148999, intron 1 of 4) 142 NR_148999 100129878 Hs.437704 NR_148999 ENSG00000264269 LOC100129878 - uncharacterized LOC100129878 ncRNA chr6-7147 chr6 36301888 36302098 + 5.42 0.000 exon (NM_001145716, exon 6 of 8) exon (NM_001145716, exon 6 of 8) 31533 NM_001145717 285848 Hs.407002 NM_173676 ENSG00000180316 PNPLA1 ARCI10|dJ50J22.1 patatin like phospholipase domain containing 1 protein-coding chr15-4170 chr15 93424016 93424226 + 5.42 0.000 Intergenic Intergenic 218055 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr6-7951 chr6 111781897 111782107 + 5.42 0.000 intron (NM_153047, intron 2 of 13) Charlie4a|DNA|hAT-Charlie -22085 NM_001370529 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr10-6465 chr10 33703910 33704120 + 5.42 0.000 Intergenic Intergenic 68665 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr4-7698 chr4 88488862 88489072 + 5.42 0.000 intron (NM_016323, intron 15 of 22) intron (NM_016323, intron 15 of 22) 31848 NM_016323 51191 Hs.26663 NM_016323 ENSG00000138646 HERC5 CEB1|CEBP1 HECT and RLD domain containing E3 ubiquitin protein ligase 5 protein-coding chr2-8685 chr2 151016035 151016245 + 5.42 0.000 Intergenic LTR88c|LTR|Gypsy? 245723 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr1-16321 chr1 217083385 217083595 + 5.42 0.000 intron (NM_001350122, intron 1 of 9) MIR3|SINE|MIR -5203 NM_001350125 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr13-1517 chr13 21818065 21818275 + 5.42 0.000 Intergenic LTR12E|LTR|ERV1 59990 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr5-7141 chr5 2142797 2143007 + 5.42 0.000 Intergenic Intergenic 169299 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr11-8360 chr11 81894789 81894999 + 5.42 0.000 intron (NR_120571, intron 6 of 7) intron (NR_120571, intron 6 of 7) -4058 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr15-1581 chr15 75503769 75503979 + 5.42 0.000 intron (NM_002833, intron 7 of 12) SVA_D|Retroposon|SVA -48059 NM_001145357 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding chr11-6955 chr11 113352048 113352258 + 5.42 0.000 non-coding (NR_147891, exon 16 of 23) non-coding (NR_147891, exon 16 of 23) -35626 NM_178510 255239 Hs.448473 NM_178510 ENSG00000170209 ANKK1 PKK2|sgK288 ankyrin repeat and kinase domain containing 1 protein-coding chr12-7737 chr12 92854438 92854648 + 5.42 0.000 intron (NM_003566, intron 5 of 28) intron (NM_003566, intron 5 of 28) 74752 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr6-6692 chr6 170176597 170176807 + 5.42 0.000 Intergenic CpG 16060 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr2-12503 chr2 63489342 63489552 + 5.42 0.000 intron (NR_148704, intron 3 of 18) L1MC4|LINE|L1 -51440 NM_001042692 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr10-7579 chr10 18360754 18360964 + 5.42 0.000 intron (NM_201590, intron 1 of 12) MIRb|SINE|MIR 20150 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr5-5887 chr5 16617653 16617863 + 5.42 0.000 promoter-TSS (NM_001034850) promoter-TSS (NM_001034850) -700 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr11-9976 chr11 77487947 77488157 + 5.42 0.000 Intergenic L1M1|LINE|L1 -13989 NM_001128620 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chrX-1421 chrX 38803893 38804103 + 5.42 0.000 promoter-TSS (NR_046706) promoter-TSS (NR_046706) -115 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr8-7196 chr8 124932431 124932641 + 5.42 0.000 Intergenic L3|LINE|CR1 -9472 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA chr20-2165 chr20 44083775 44083985 + 5.42 0.000 Intergenic Intergenic 103308 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr9-5922 chr9 133142445 133142655 + 5.42 0.000 intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) 6660 NM_001042368 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr7-4495 chr7 151766869 151767079 + 5.42 0.000 intron (NM_016203, intron 3 of 15) MLT1C|LTR|ERVL-MaLR -30660 NM_001304527 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr5-3486 chr5 172594516 172594726 + 5.42 0.000 Intergenic Intergenic -35607 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr9-8288 chr9 113557076 113557286 + 5.42 0.000 intron (NM_001276261, intron 10 of 14) MLT1K|LTR|ERVL-MaLR -7773 NM_134427 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr10-6981 chr10 69494123 69494333 + 5.42 0.000 intron (NM_012339, intron 3 of 7) intron (NM_012339, intron 3 of 7) 42761 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr9-4017 chr9 38718164 38718374 + 5.42 0.000 Intergenic L1ME4b|LINE|L1 97181 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr12-8002 chr12 112062214 112062424 + 5.42 0.000 intron (NM_024953, intron 11 of 23) AluSz|SINE|Alu -24604 NR_037430 100500889 NR_037430 ENSG00000266370 MIR3657 - microRNA 3657 ncRNA chr2-14746 chr2 239471138 239471348 + 5.42 0.000 Intergenic Intergenic 69495 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr2-3454 chr2 120223414 120223624 + 5.42 0.000 promoter-TSS (NM_024121) promoter-TSS (NM_024121) -119 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr6-5756 chr6 157565653 157565863 + 5.42 0.000 intron (NM_024630, intron 2 of 8) AluSx|SINE|Alu 36626 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr9-8729 chr9 132324916 132325126 + 5.42 0.000 intron (NM_001351527, intron 10 of 25) intron (NM_001351527, intron 10 of 25) 29835 NM_001351527 23064 Hs.460317 NM_015046 ENSG00000107290 SETX ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 senataxin protein-coding chr5-8890 chr5 155358689 155358899 + 5.42 0.000 Intergenic L1PA15|LINE|L1 345039 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr12-7810 chr12 99017595 99017805 + 5.42 0.000 intron (NM_152788, intron 17 of 25) LTR8B|LTR|ERV1 -75659 NR_110095 101928937 Hs.555499 NR_110095 ENSG00000258039 LOC101928937 - uncharacterized LOC101928937 ncRNA chr1-8871 chr1 4010666 4010876 + 5.42 0.000 Intergenic Intergenic -61791 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr4-6562 chr4 183771855 183772065 + 5.42 0.000 Intergenic Intergenic -26062 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr8-3681 chr8 17279357 17279567 + 5.42 0.000 intron (NM_001363167, intron 6 of 11) intron (NM_001363167, intron 6 of 11) 32504 NM_001363171 137492 Hs.343873 NM_152415 ENSG00000155975 VPS37A HCRP1|PQBP2|SPG53 VPS37A subunit of ESCRT-I protein-coding chr1-15016 chr1 92846438 92846648 + 5.42 0.000 intron (NM_001252270, intron 3 of 3) intron (NM_001252270, intron 3 of 3) 5824 NR_002444 26782 Hs.180946 NR_002444 ENSG00000207523 SNORA66 RNU66|U66 small nucleolar RNA, H/ACA box 66 snoRNA chr6-7172 chr6 37718355 37718565 + 5.42 0.000 Intergenic Intergenic -20577 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr4-6704 chr4 3591169 3591379 + 5.42 0.000 TTS (NR_040045) TTS (NR_040045) 14405 NR_040045 285492 Hs.145563 NM_173661 LINC00955 - long intergenic non-protein coding RNA 955 ncRNA chr3-7523 chr3 175980623 175980833 + 5.42 0.000 Intergenic Intergenic -204395 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr10-7870 chr10 48312266 48312476 + 5.42 0.000 intron (NM_001323327, intron 2 of 12) intron (NM_001323327, intron 2 of 12) 5694 NM_001323331 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr1-16307 chr1 215920483 215920693 + 5.42 0.000 intron (NM_206933, intron 38 of 71) MIR|SINE|MIR -151877 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr11-7414 chr11 99646421 99646631 + 5.42 0.000 intron (NM_175566, intron 1 of 21) intron (NM_175566, intron 1 of 21) 90381 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chrX-1957 chrX 8673518 8673728 + 5.42 0.000 intron (NM_000216, intron 2 of 13) intron (NM_000216, intron 2 of 13) 58514 NM_000216 3730 Hs.521869 NM_000216 ENSG00000011201 ANOS1 ADMLX|HH1|HHA|KAL|KAL1|KALIG-1|KMS|WFDC19 anosmin 1 protein-coding chr2-13146 chr2 118679176 118679386 + 5.42 0.000 Intergenic Intergenic -76315 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr17-7506 chr17 17143460 17143670 + 5.42 0.000 exon (NM_015134, exon 9 of 23) exon (NM_015134, exon 9 of 23) 62768 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr7-7154 chr7 4925335 4925545 + 5.42 0.000 intron (NR_072989, intron 2 of 8) intron (NR_072989, intron 2 of 8) 33747 NM_001270375 221938 Hs.558694 NM_198403 ENSG00000136297 MMD2 PAQR10 monocyte to macrophage differentiation associated 2 protein-coding chr11-8036 chr11 18753651 18753861 + 5.42 0.000 intron (NM_001278236, intron 3 of 14) L1ME5|LINE|L1 -27568 NM_173588 283284 Hs.434152 NM_173588 ENSG00000179057 IGSF22 IGFN2 immunoglobulin superfamily member 22 protein-coding chr2-12548 chr2 68114808 68115018 + 5.42 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 42614 NM_001256476 116143 Hs.631877 NM_138458 ENSG00000243667 WDR92 - WD repeat domain 92 protein-coding chr17-7617 chr17 27765134 27765344 + 5.42 0.000 intron (NM_000625, intron 20 of 26) AluSz6|SINE|Alu 35290 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr6-4867 chr6 88165663 88165873 + 5.42 0.000 5' UTR (NM_001160259, exon 1 of 2) 5' UTR (NM_001160259, exon 1 of 2) 579 NM_001365872 1268 Hs.75110 NM_016083 ENSG00000118432 CNR1 CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR cannabinoid receptor 1 protein-coding chr5-8732 chr5 145443081 145443291 + 5.42 0.000 Intergenic MER11D|LTR|ERVK 392156 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr22-3880 chr22 34954570 34954780 + 5.42 0.000 intron (NR_138042, intron 1 of 4) AluSz|SINE|Alu 43241 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr22-3790 chr22 29325494 29325704 + 5.42 0.000 Intergenic L1ME4b|LINE|L1 7659 NR_003686 100113380 NR_003686 ENSG00000239127 SNORD125 - small nucleolar RNA, C/D box 125 snoRNA chr22-2460 chr22 20312584 20312794 + 5.42 0.000 Intergenic Intergenic 7371 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr12-4927 chr12 68538788 68538998 + 5.42 0.000 Intergenic Intergenic -72006 NM_001251918 5908 Hs.369920 NM_015646 ENSG00000127314 RAP1B K-REV|RAL1B RAP1B, member of RAS oncogene family protein-coding chr6-7654 chr6 82877478 82877688 + 5.42 0.000 Intergenic MER77B|LTR|ERVL 188258 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr9-7269 chr9 6165361 6165571 + 5.42 0.000 Intergenic Intergenic -49683 NM_001314047 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr4-6215 chr4 56271027 56271237 + 5.42 0.000 intron (NM_020722, intron 2 of 10) intron (NM_020722, intron 2 of 10) 100937 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr5-8834 chr5 150987396 150987606 + 5.42 0.000 Intergenic LTR46-int|LTR|ERV1 -33090 NM_001329790 2878 Hs.386793 NM_002084 ENSG00000211445 GPX3 GPx-P|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding chr17-2519 chr17 8611694 8611904 + 5.42 0.000 intron (NM_001256012, intron 2 of 42) L1ME3B|LINE|L1 18926 NM_005964 4628 Hs.16355 NM_005964 ENSG00000133026 MYH10 NMMHC-IIB|NMMHCB myosin heavy chain 10 protein-coding chr7-5520 chr7 44557148 44557358 + 5.42 0.000 Intergenic L1PREC2|LINE|L1 -15923 NM_001101648 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr3-6994 chr3 169844830 169845040 + 5.42 0.000 intron (NM_001277127, intron 8 of 8) AluSc5|SINE|Alu 23044 NM_001080460 344657 Hs.319484 NM_001080460 ENSG00000188306 LRRIQ4 LRRC64 leucine rich repeats and IQ motif containing 4 protein-coding chr12-7009 chr12 31813477 31813687 + 5.42 0.000 Intergenic L2a|LINE|L2 -21284 NM_001013699 440093 Hs.448697 NM_001013699 ENSG00000188375 H3F3C H3.5 H3 histone family member 3C protein-coding chr4-5785 chr4 78914517 78914727 + 5.42 0.000 non-coding (NR_146462, exon 7 of 7) non-coding (NR_146462, exon 7 of 7) 24816 NM_001040202 152559 Hs.657312 NM_177453 ENSG00000163291 PAQR3 RKTG progestin and adipoQ receptor family member 3 protein-coding chr1-16255 chr1 211621626 211621836 + 5.42 0.000 Intergenic Intergenic -18077 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr22-3561 chr22 18041564 18041774 + 5.42 0.000 Intergenic SVA_D|Retroposon|SVA 12284 NR_024417 100192420 Hs.589947 NR_024417 ENSG00000235295 LINC01634 - long intergenic non-protein coding RNA 1634 ncRNA chrX-2741 chrX 127231427 127231637 + 5.42 0.000 Intergenic HERVH-int|LTR|ERV1 411803 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr4-8561 chr4 166118547 166118757 + 5.42 0.000 Intergenic LTR16A2|LTR|ERVL 245415 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr2-9808 chr2 133981310 133981520 + 5.42 0.000 Intergenic AluSq|SINE|Alu -138520 NM_001371457 chr5-9007 chr5 165201306 165201516 + 5.42 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 731132 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr18-1895 chr18 29840168 29840378 + 5.42 0.000 Intergenic MER44B|DNA|TcMar-Tigger -458637 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr13-4276 chr13 98104044 98104254 + 5.42 0.000 Intergenic Intergenic -38440 NM_001286839 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, ARH/RhoGEF and pleckstrin domain protein 1 protein-coding chr6-7479 chr6 58262965 58263175 + 5.42 0.000 Intergenic SATR1|Satellite|Satellite -301624 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr3-5810 chr3 28806263 28806473 + 5.42 0.000 Intergenic Intergenic 231090 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr1-14110 chr1 31050265 31050475 + 5.42 0.000 intron (NM_001020658, intron 2 of 21) AluSz6|SINE|Alu 15347 NM_014676 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr1-9884 chr1 67760085 67760295 + 5.42 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) -72098 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12, DIRAS3 and WLS antisense RNA 1 ncRNA chr14-4067 chr14 61372282 61372492 + 5.42 0.000 intron (NM_006255, intron 1 of 13) L1MC3|LINE|L1 50944 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chrX-5381 chrX 150911727 150911937 + 5.42 0.000 Intergenic AluJo|SINE|Alu -13016 NM_001242614 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr4-7607 chr4 81970606 81970816 + 5.42 0.000 Intergenic Intergenic 403280 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr3-10721 chr3 154080439 154080649 + 5.42 0.000 intron (NR_037901, intron 2 of 3) Charlie8|DNA|hAT-Charlie -40459 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr10-5340 chr10 71613330 71613540 + 5.42 0.000 intron (NM_052836, intron 9 of 12) intron (NM_052836, intron 9 of 12) -101515 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr18-1199 chr18 31323890 31324100 + 5.42 0.000 intron (NM_001942, intron 1 of 14) AluSc|SINE|Alu 5835 NM_001942 1828 Hs.2633 NM_001942 ENSG00000134760 DSG1 CDHF4|DG1|DSG|EPKHE|EPKHIA|PPKS1|SPPK1 desmoglein 1 protein-coding chr3-6509 chr3 113495098 113495308 + 5.42 0.000 intron (NM_001331078, intron 4 of 17) intron (NM_001331078, intron 4 of 17) 19641 NM_001331079 152185 Hs.477144 NM_144718 ENSG00000163611 SPICE1 CCDC52|SPICE spindle and centriole associated protein 1 protein-coding chr2-12256 chr2 44809258 44809468 + 5.42 0.000 Intergenic MIRb|SINE|MIR 129525 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr2-11815 chr2 17428887 17429097 + 5.42 0.000 Intergenic Intergenic 89448 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr6-5934 chr6 70622495 70622705 + 5.42 0.000 Intergenic Tigger5|DNA|TcMar-Tigger -45283 NM_001281439 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr21-1557 chr21 9743720 9743930 + 5.42 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 77236 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chrX-3353 chrX 137236325 137236535 + 5.42 0.000 Intergenic Intergenic -204756 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr6-7294 chr6 43665871 43666081 + 5.42 0.000 intron (NM_152732, intron 4 of 4) AluJb|SINE|Alu 20940 NM_152732 221421 Hs.534585 NM_152732 ENSG00000172426 RSPH9 C6orf206|CILD12|MRPS18AL1 radial spoke head 9 homolog protein-coding chr17-4412 chr17 39266064 39266274 + 5.42 0.000 intron (NM_001370209, intron 11 of 13) AluSz6|SINE|Alu -31231 NR_162098 113839521 NR_162098 MIR548BC - microRNA 548BC ncRNA chr14-5017 chr14 78175133 78175343 + 5.42 0.000 intron (NR_073547, intron 1 of 20) intron (NR_073547, intron 1 of 20) 4865 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chrX-256 chrX 1366585 1366795 + 5.42 0.000 intron (NM_002183, intron 9 of 11) CpG 25423 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chr16-3778 chr16 30494608 30494818 + 5.42 0.000 exon (NM_001114380, exon 11 of 29) exon (NM_001114380, exon 11 of 29) -9206 NR_039743 100616405 NR_039743 ENSG00000266305 MIR4518 mir-4518 microRNA 4518 ncRNA chr8-6784 chr8 94639529 94639739 + 5.42 0.000 promoter-TSS (NR_034034) promoter-TSS (NR_034034) -167 NR_034034 100288748 Hs.608210 NR_034034 ENSG00000261437 LOC100288748 - uncharacterized LOC100288748 ncRNA chr4-5966 chr4 170341351 170341561 + 5.42 0.000 Intergenic AluSc|SINE|Alu 114865 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chr5-5679 chr5 160297163 160297373 + 5.42 0.000 intron (NR_131769, intron 2 of 7) intron (NR_131769, intron 2 of 7) 15296 NM_024565 79616 Hs.14070 NM_024565 ENSG00000135083 CCNJL - cyclin J like protein-coding chr14-3624 chr14 61089213 61089423 + 5.42 0.000 Intergenic L1MCc|LINE|L1 -107628 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr2-11981 chr2 27264746 27264956 + 5.42 0.000 intron (NM_001318949, intron 1 of 8) CpG-15874 -1804 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr6-3491 chr6 14094810 14095020 + 5.42 0.000 Intergenic Intergenic -22341 NM_001251901 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr8-5041 chr8 23840023 23840233 + 5.42 0.000 Intergenic AluSx1|SINE|Alu 14678 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr6-4696 chr6 55633045 55633255 + 5.42 0.000 Intergenic Tigger12|DNA|TcMar-Tigger -53936 NM_001042406 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr11-9324 chr11 45968064 45968274 + 5.42 0.000 intron (NR_147890, intron 8 of 18) L2c|LINE|L2 45513 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr19-2811 chr19 48955434 48955644 + 5.42 0.000 intron (NM_001291431, intron 1 of 3) intron (NM_001291431, intron 1 of 3) 664 NM_001291429 581 Hs.624291 NM_004324 ENSG00000087088 BAX BCL2L4 BCL2 associated X, apoptosis regulator protein-coding chr8-2495 chr8 486574 486784 + 5.42 0.000 Intergenic Intergenic 29073 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr11-10642 chr11 126339194 126339404 + 5.42 0.000 intron (NM_014026, intron 4 of 5) intron (NM_014026, intron 4 of 5) 16288 NR_033839 399972 Hs.585206 NR_033839 GSEC DCPS-AS1|ST3GAL4-AS1 G-quadruplex forming sequence containing lncRNA ncRNA chr11-10581 chr11 122850484 122850694 + 5.42 0.000 intron (NM_019604, intron 2 of 9) intron (NM_019604, intron 2 of 9) -11742 NM_001304782 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr16-5975 chr16 4919424 4919634 + 5.42 0.000 intron (NM_002705, intron 1 of 21) AluSx|SINE|Alu 17619 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr18-3032 chr18 27328796 27329006 + 5.42 0.000 Intergenic L1PA13|LINE|L1 13755 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr2-11349 chr2 204061540 204061750 + 5.42 0.000 Intergenic Intergenic 124897 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr1-14760 chr1 68016577 68016787 + 5.42 0.000 intron (NR_040077, intron 1 of 9) intron (NR_040077, intron 1 of 9) 34949 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding chr6-4975 chr6 106913652 106913862 + 5.42 0.000 Intergenic Intergenic 60282 NM_001291739 100133941 Hs.644105 NM_013230 ENSG00000272398 CD24 CD24A CD24 molecule protein-coding chr4-6978 chr4 21501829 21502039 + 5.42 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) -37176 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr4-5402 chr4 3525588 3525798 + 5.42 0.000 intron (NM_002337, intron 1 of 7) intron (NM_002337, intron 1 of 7) 6456 NR_110005 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr3-7778 chr3 75618090 75618300 + 5.42 0.000 Intergenic Intergenic -12568 NR_031714 100302212 NR_031714 ENSG00000283894 MIR1324 MIRN1324|hsa-mir-1324 microRNA 1324 ncRNA chr5-5913 chr5 44998780 44998990 + 5.42 0.000 Intergenic Intergenic 189938 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr1-12127 chr1 167193834 167194044 + 5.42 0.000 intron (NR_110811, intron 2 of 3) L1MEc|LINE|L1 1866 NR_110811 101928484 Hs.568496 NR_110811 LINC01363 RBSG4 long intergenic non-protein coding RNA 1363 ncRNA chr2-10999 chr2 101119256 101119466 + 5.42 0.000 intron (NM_001102426, intron 1 of 19) intron (NM_001102426, intron 1 of 19) 32086 NR_138475 11138 Hs.442657 NM_007063 ENSG00000204634 TBC1D8 AD3|GRAMD8|HBLP1|TBC1D8A|VRP TBC1 domain family member 8 protein-coding chr14-4535 chr14 41387384 41387594 + 5.42 0.000 Intergenic Intergenic -219367 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr4-4418 chr4 47716039 47716249 + 5.42 0.000 intron (NM_006587, intron 5 of 21) intron (NM_006587, intron 5 of 21) 63475 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA chr15-4402 chr15 43596432 43596642 + 5.42 0.000 intron (NM_020990, intron 7 of 9) intron (NM_020990, intron 7 of 9) 2703 NR_135748 1159 Hs.741420 NM_020990 ENSG00000237289 CKMT1B CKMT|CKMT1|UMTCK creatine kinase, mitochondrial 1B protein-coding chr2-14723 chr2 238558248 238558458 + 5.42 0.000 Intergenic MIR3|SINE|MIR -2854 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chrX-3439 chrX 21078766 21078976 + 5.42 0.000 Intergenic Intergenic -295547 NM_001330770 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr17-7475 chr17 15340962 15341172 + 5.42 0.000 intron (NM_031898, intron 1 of 8) intron (NM_031898, intron 1 of 8) 530 NM_031898 64518 Hs.414648 NM_031898 ENSG00000125409 TEKT3 - tektin 3 protein-coding chrX-4003 chrX 16057245 16057455 + 5.42 0.000 Intergenic Intergenic -66215 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr3-6176 chr3 59774567 59774777 + 5.42 0.000 intron (NM_001354590, intron 7 of 8) L2a|LINE|L2 -116175 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr7-7204 chr7 16140190 16140400 + 5.42 0.000 intron (NM_001101426, intron 9 of 9) AluSx|SINE|Alu -70191 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr5-9033 chr5 168431422 168431632 + 5.42 0.000 intron (NM_001161661, intron 15 of 22) intron (NM_001161661, intron 15 of 22) -54944 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chr12-6461 chr12 95500104 95500314 + 5.42 0.000 intron (NM_006838, intron 7 of 10) L1M4c|LINE|L1 26057 NM_001317182 10988 Hs.444986 NM_006838 ENSG00000111142 METAP2 MAP2|MNPEP|p67eIF2 methionyl aminopeptidase 2 protein-coding chr4-5426 chr4 13149118 13149328 + 5.42 0.000 Intergenic L2a|LINE|L2 335117 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr18-3474 chr18 70675371 70675581 + 5.42 0.000 Intergenic MLT2B2|LTR|ERVL -24522 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr8-6136 chr8 29640360 29640570 + 5.42 0.000 Intergenic Intergenic 107644 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA chr13-4290 chr13 98783855 98784065 + 5.42 0.000 Intergenic Intergenic -31288 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr20-3487 chr20 59784752 59784962 + 5.42 0.000 intron (NM_080672, intron 7 of 12) MIR|SINE|MIR 63647 NM_183244 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chrX-2847 chrX 139664708 139664918 + 5.42 0.000 intron (NM_001099855, intron 1 of 27) L1M1|LINE|L1 -21910 NM_005369 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr20-3211 chr20 53226848 53227058 + 5.42 0.000 intron (NM_001193421, intron 1 of 2) intron (NM_001193421, intron 1 of 2) 41670 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr2-12136 chr2 37414365 37414575 + 5.42 0.000 Intergenic Intergenic 69840 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr19-6239 chr19 6471030 6471240 + 5.42 0.000 intron (NM_024898, intron 17 of 22) AluJb|SINE|Alu 6864 NM_139161 92359 Hs.150319 NM_139161 ENSG00000130545 CRB3 - crumbs cell polarity complex component 3 protein-coding chr12-6499 chr12 105100668 105100878 + 5.42 0.000 Intergenic AluJr|SINE|Alu 6869 NR_121211 414300 Hs.191637 NR_121211 LOC414300 - uncharacterized LOC414300 ncRNA chr2-13735 chr2 168378929 168379139 + 5.42 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -77238 NM_203463 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr5-5005 chr5 82352030 82352240 + 5.42 0.000 Intergenic Intergenic 72673 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr4-8379 chr4 149487720 149487930 + 5.42 0.000 intron (NM_001363507, intron 12 of 13) L1MA2|LINE|L1 328018 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr21-1585 chr21 15521171 15521381 + 5.42 0.000 Intergenic MER52A|LTR|ERV1 -208658 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr19-6092 chr19 3320286 3320496 + 5.42 0.000 Intergenic Intergenic -39239 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chrX-3948 chrX 11012510 11012720 + 5.42 0.000 Intergenic Intergenic -98717 NM_001122608 3052 Hs.211571 NM_005333 ENSG00000004961 HCCS CCHL|LSDMCA1|MCOPS7|MLS holocytochrome c synthase protein-coding chr16-4646 chr16 74424324 74424534 + 5.42 0.000 Intergenic AluJb|SINE|Alu -2959 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr3-5706 chr3 15046828 15047038 + 5.42 0.000 3' UTR (NM_001291694, exon 14 of 14) 3' UTR (NM_001291694, exon 14 of 14) 18382 NM_022497 64432 Hs.657764 NM_022497 ENSG00000131368 MRPS25 MRP-S25|RPMS25 mitochondrial ribosomal protein S25 protein-coding chr4-7059 chr4 29935787 29935997 + 5.42 0.000 Intergenic L1PA7|LINE|L1 721600 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr22-4027 chr22 40812198 40812408 + 5.42 0.000 intron (NM_006358, intron 1 of 8) intron (NM_006358, intron 1 of 8) 1655 NR_039923 100616283 NR_039923 ENSG00000266594 MIR4766 mir-4766 microRNA 4766 ncRNA chr8-7467 chr8 142160164 142160374 + 5.42 0.000 Intergenic AluSq2|SINE|Alu -16070 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr15-5302 chr15 101499486 101499696 + 5.42 0.000 Intergenic Intergenic -9607 NM_138325 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr8-6746 chr8 89836794 89837004 + 5.42 0.000 Intergenic Intergenic -64969 NM_004337 734 Hs.436445 NM_004337 ENSG00000164823 OSGIN2 C8orf1|hT41 oxidative stress induced growth inhibitor family member 2 protein-coding chr20-3767 chr20 20237451 20237661 + 5.42 0.000 intron (NM_015585, intron 18 of 26) intron (NM_015585, intron 18 of 26) -130548 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr15-4843 chr15 73964762 73964972 + 5.42 0.000 Intergenic L1MCc|LINE|L1 27428 NM_001256675 9399 Hs.194816 NM_004809 ENSG00000067221 STOML1 SLP-1|STORP|hUNC-24 stomatin like 1 protein-coding chr17-7605 chr17 22453611 22453821 + 5.42 0.000 Intergenic Intergenic 47697 NR_027084 284124 Hs.310247 NR_027084 ENSG00000276399 FLJ36000 - uncharacterized FLJ36000 ncRNA chr5-4180 chr5 108261978 108262188 + 5.42 0.000 intron (NM_001163315, intron 4 of 8) AluYh3|SINE|Alu 120015 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr13-3623 chr13 30195397 30195607 + 5.42 0.000 Intergenic Intergenic -42428 NR_138041 102157400 Hs.639879 NR_138041 LINC00384 - long intergenic non-protein coding RNA 384 ncRNA chr2-11649 chr2 6475969 6476179 + 5.42 0.000 Intergenic Intergenic -100652 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr18-2582 chr18 11650741 11650951 + 5.42 0.000 Intergenic MLT1F-int|LTR|ERVL-MaLR 4095 NR_106975 102465690 NR_106975 ENSG00000283492 MIR7153 hsa-mir-7153|mir-7153 microRNA 7153 ncRNA chr17-8353 chr17 73940056 73940266 + 5.42 0.000 Intergenic Intergenic -111624 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr2-4631 chr2 169324566 169324776 + 5.42 0.000 intron (NM_004525, intron 1 of 78) intron (NM_004525, intron 1 of 78) 37863 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr18-1784 chr18 11520630 11520840 + 5.42 0.000 Intergenic Intergenic 30687 NR_110778 101927433 Hs.331210 NR_110778 ENSG00000267252 LINC01255 - long intergenic non-protein coding RNA 1255 ncRNA chrX-3010 chrX 53484800 53485010 + 5.42 0.000 Intergenic ERVL-int|LTR|ERVL -50529 NM_004493 3028 Hs.171280 NM_004493 ENSG00000072506 HSD17B10 17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|HSD10MD|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1 hydroxysteroid 17-beta dehydrogenase 10 protein-coding chrX-4758 chrX 95031730 95031940 + 5.42 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 31391 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr10-5346 chr10 72007740 72007950 + 5.42 0.000 exon (NM_004273, exon 3 of 3) exon (NM_004273, exon 3 of 3) 43450 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr2-10071 chr2 43101078 43101288 + 5.42 0.000 intron (NR_151714, intron 1 of 1) CpG 1262 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chrX-3365 chrX 145525737 145525947 + 5.42 0.000 Intergenic L1M1|LINE|L1 278339 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chrX-4931 chrX 110477726 110477936 + 5.42 0.000 Intergenic L1M1|LINE|L1 -37598 NM_001171689 9949 Hs.656243 NM_015365 ENSG00000101935 AMMECR1 AMMERC1|MFHIEN Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding chr12-4788 chr12 53767200 53767410 + 5.42 0.000 Intergenic Intergenic -10271 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr11-9167 chr11 35098294 35098504 + 5.42 0.000 Intergenic MIRb|SINE|MIR 39633 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr11-7760 chr11 79026937 79027147 + 5.42 0.000 intron (NM_001098816, intron 6 of 33) intron (NM_001098816, intron 6 of 33) 375067 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr2-13013 chr2 107711234 107711444 + 5.42 0.000 Intergenic Intergenic -42773 NR_126370 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chr7-7309 chr7 44025525 44025735 + 5.42 0.000 Intergenic Intergenic -6436 NR_003655 84820 Hs.657028 NM_032734 ENSG00000214783 POLR2J4 RPB11-phi RNA polymerase II subunit J4, pseudogene pseudo chr9-5855 chr9 130499370 130499580 + 5.42 0.000 intron (NM_054012, intron 13 of 14) intron (NM_054012, intron 13 of 14) 54514 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr14-4431 chr14 32662264 32662474 + 5.42 0.000 intron (NM_004274, intron 7 of 13) intron (NM_004274, intron 7 of 13) -276510 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr3-7794 chr3 87524565 87524775 + 5.42 0.000 Intergenic THE1C|LTR|ERVL-MaLR -248086 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr20-1427 chr20 38379030 38379240 + 5.42 0.000 Intergenic SVA_D|Retroposon|SVA 32653 NM_004139 3929 Hs.154078 NM_004139 ENSG00000129988 LBP BPIFD2 lipopolysaccharide binding protein protein-coding chr22-4038 chr22 41350129 41350339 + 5.42 0.000 intron (NM_017590, intron 16 of 22) L2a|LINE|L2 -17099 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr1-9101 chr1 16948221 16948431 + 5.42 0.000 intron (NM_014675, intron 17 of 36) intron (NM_014675, intron 17 of 36) 26395 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr1-14951 chr1 87636237 87636447 + 5.42 0.000 Intergenic LTR12C|LTR|ERV1 -264687 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr1-15124 chr1 102194453 102194663 + 5.42 0.000 Intergenic MER61C|LTR|ERV1 -197324 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr17-7041 chr17 61246448 61246658 + 5.42 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 121151 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr1-10251 chr1 118217980 118218190 + 5.42 0.000 Intergenic Intergenic -32857 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr12-7867 chr12 105140526 105140736 + 5.42 0.000 intron (NM_001293640, intron 16 of 32) intron (NM_001293640, intron 16 of 32) 32900 NM_001293640 23325 Hs.12144 NM_015275 ENSG00000136051 WASHC4 KIAA1033|MRT43|SWIP WASH complex subunit 4 protein-coding chr6-7956 chr6 112008577 112008787 + 5.42 0.000 Intergenic Intergenic -45393 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 CCN6 LIBC|PPAC|PPD|WISP-3|WISP3 cellular communication network factor 6 protein-coding chr12-8051 chr12 115628786 115628996 + 5.42 0.000 Intergenic L2a|LINE|L2 519763 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr2-8023 chr2 69994392 69994602 + 5.42 0.000 intron (NR_033872, intron 8 of 10) intron (NR_033872, intron 8 of 10) -32232 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase retroviral like 1 protein-coding chr11-9858 chr11 73213433 73213643 + 5.42 0.000 Intergenic Intergenic -4743 NM_002564 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr7-5364 chr7 31036960 31037170 + 5.42 0.000 Intergenic Intergenic -15243 NM_001199636 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr8-5865 chr8 13747532 13747742 + 5.42 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 117947 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr11-5097 chr11 118860799 118861009 + 5.42 0.000 Intergenic Intergenic -22988 NM_001716 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr8-3089 chr8 27522551 27522761 + 5.42 0.000 intron (NM_001979, intron 11 of 18) intron (NM_001979, intron 11 of 18) 31513 NM_001256482 2053 Hs.212088 NM_001979 ENSG00000120915 EPHX2 ABHD20|CEH|SEH epoxide hydrolase 2 protein-coding chr9-5272 chr9 81678135 81678345 + 5.42 0.000 intron (NM_005077, intron 4 of 19) AluJr4|SINE|Alu 11295 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr11-10662 chr11 127389857 127390067 + 5.42 0.000 Intergenic Intergenic 118892 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chrX-3731 chrX 119901943 119902153 + 5.42 0.000 intron (NM_001008534, intron 2 of 5) (CAAA)n|Simple_repeat|Simple_repeat 6075 NM_001008534 158798 Hs.592245 NM_178813 ENSG00000186471 AKAP14 AKAP28|PRKA14 A-kinase anchoring protein 14 protein-coding chr17-6522 chr17 32374077 32374287 + 5.42 0.000 Intergenic AluSq2|SINE|Alu 24044 NM_001098507 7756 Hs.500775 NM_003457 ENSG00000010244 ZNF207 BuGZ|hBuGZ zinc finger protein 207 protein-coding chr5-8059 chr5 93312066 93312276 + 5.42 0.000 Intergenic UCON26|Unknown|Unknown 259172 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr20-4101 chr20 40817553 40817763 + 5.42 0.000 Intergenic Intergenic -103035 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA chr5-8015 chr5 87859977 87860187 + 5.42 0.000 Intergenic L1PB3|LINE|L1 198040 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr20-4414 chr20 59559355 59559565 + 5.42 0.000 Intergenic MER115|DNA|hAT-Tip100 -18049 NM_001199505 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr6-8048 chr6 120924355 120924565 + 5.42 0.000 Intergenic MLT2B2|LTR|ERVL 410020 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr22-2571 chr22 28314748 28314958 + 5.42 0.000 intron (NM_001145418, intron 2 of 22) AluJr|SINE|Alu -145016 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr2-11282 chr2 183468796 183469006 + 5.42 0.000 Intergenic Intergenic 344458 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr11-7795 chr11 97878704 97878914 + 5.42 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -1142140 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr7-8152 chr7 28974449 28974659 + 5.42 0.000 Intergenic LTR78|LTR|ERV1 -5413 NR_038965 100506497 Hs.586328 NR_038965 ENSG00000272568 LOC100506497 - uncharacterized LOC100506497 ncRNA chr1-8391 chr1 76841979 76842189 + 5.42 0.000 Intergenic Intergenic -25396 NM_001320274 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr17-8587 chr17 80439806 80440016 + 5.42 0.000 Intergenic Intergenic 20493 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr3-8961 chr3 15129199 15129409 + 5.42 0.000 Intergenic Intergenic -30147 NR_126155 64145 Hs.475565 NM_022340 ENSG00000131381 RBSN Rabenosyn-5|ZFYVE20 rabenosyn, RAB effector protein-coding chr14-3476 chr14 101781690 101781900 + 5.42 0.000 intron (NM_001352915, intron 2 of 14) CpG 19425 NM_001352915 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr10-8052 chr10 64698546 64698756 + 5.42 0.000 Intergenic L1PA16|LINE|L1 -126877 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chrX-3720 chrX 118322822 118323032 + 5.42 0.000 Intergenic Intergenic -23146 NM_001184966 54521 Hs.98510 NM_019045 ENSG00000131725 WDR44 RAB11BP|RPH11|SYM-4 WD repeat domain 44 protein-coding chr5-6728 chr5 73793650 73793860 + 5.42 0.000 intron (NM_001177693, intron 7 of 35) intron (NM_001177693, intron 7 of 35) -19791 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr14-3763 chr14 51155098 51155308 + 5.42 0.000 Intergenic ERV24B_Prim-int|LTR|ERV1 -59499 NM_052978 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding chr6-7349 chr6 46821031 46821241 + 5.42 0.000 intron (NM_005588, intron 7 of 13) intron (NM_005588, intron 7 of 13) 27747 NM_005588 4224 Hs.179704 NM_005588 ENSG00000112818 MEP1A PPHA meprin A subunit alpha protein-coding chr7-5636 chr7 54662668 54662878 + 5.42 0.000 Intergenic Intergenic 96438 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr7-9022 chr7 101355157 101355367 + 5.42 0.000 Intergenic AluSx|SINE|Alu -7558 NM_133457 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr10-7554 chr10 15712792 15713002 + 5.42 0.000 intron (NM_001291494, intron 2 of 28) intron (NM_001291494, intron 2 of 28) 7025 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr6-5964 chr6 83378658 83378868 + 5.42 0.000 intron (NM_002395, intron 3 of 13) intron (NM_002395, intron 3 of 13) 52288 NM_002395 4199 Hs.21160 NM_002395 ENSG00000065833 ME1 HUMNDME|MES malic enzyme 1 protein-coding chr10-5424 chr10 77349142 77349352 + 5.42 0.000 intron (NM_001322838, intron 1 of 29) MLT1A0|LTR|ERVL-MaLR 1514 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr3-6787 chr3 143566043 143566253 + 5.42 0.000 intron (NM_173653, intron 8 of 15) intron (NM_173653, intron 8 of 15) 223902 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr6-6038 chr6 124314630 124314840 + 5.42 0.000 intron (NM_001040214, intron 2 of 6) LTR16|LTR|ERVL 31730 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr10-6790 chr10 5982118 5982328 + 5.42 0.000 Intergenic AluSx1|SINE|Alu -3482 NM_001351095 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr16-5482 chr16 5944900 5945110 + 5.42 0.000 Intergenic (GA)n|Simple_repeat|Simple_repeat -74019 NM_001142333 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr7-5948 chr7 100390517 100390727 + 5.42 0.000 intron (NM_013439, intron 3 of 6) intron (NM_013439, intron 3 of 6) 17135 NM_178273 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr5-4249 chr5 136132712 136132922 + 5.42 0.000 promoter-TSS (NM_005903) promoter-TSS (NM_005903) -28 NM_001001420 4090 Hs.167700 NM_005903 ENSG00000113658 SMAD5 DWFC|JV5-1|MADH5 SMAD family member 5 protein-coding chr17-7619 chr17 27819507 27819717 + 5.42 0.000 Intergenic AluJo|SINE|Alu -19083 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr7-8847 chr7 87890259 87890469 + 5.42 0.000 intron (NM_001318061, intron 6 of 11) AluSx|SINE|Alu 13871 NM_001318061 10926 Hs.485380 NM_006716 ENSG00000006634 DBF4 ASK|CHIF|DBF4A|ZDBF1 DBF4 zinc finger protein-coding chr12-7114 chr12 46185678 46185888 + 5.42 0.000 3' UTR (NM_001278387, exon 18 of 18) 3' UTR (NM_001278387, exon 18 of 18) 80733 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr7-5184 chr7 8208639 8208849 + 5.42 0.000 intron (NM_001350836, intron 7 of 14) intron (NM_001350836, intron 7 of 14) 53308 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr14-2656 chr14 69960185 69960395 + 5.42 0.000 intron (NM_001034852, intron 3 of 11) intron (NM_001034852, intron 3 of 11) -17843 NR_145786 109623479 NR_145786 SNORD169 - small nucleolar RNA, C/D box 169 snoRNA chr3-9645 chr3 60378331 60378541 + 5.42 0.000 intron (NM_001320900, intron 6 of 9) OldhAT1|DNA|hAT-Ac 239434 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr12-5323 chr12 113933085 113933295 + 5.42 0.000 intron (NM_001146698, intron 16 of 24) intron (NM_001146698, intron 16 of 24) 33135 NM_001146699 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr16-6325 chr16 49473831 49474041 + 5.42 0.000 Intergenic Intergenic 44649 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr22-4144 chr22 44766432 44766642 + 5.42 0.000 intron (NM_181335, intron 1 of 11) intron (NM_181335, intron 1 of 11) 13979 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr11-8480 chr11 118395171 118395381 + 5.42 0.000 intron (NM_001204077, intron 19 of 19) AluSx|SINE|Alu -6113 NR_033759 10632 Hs.486360 NM_006476 ENSG00000167283 ATP5MG ATP5JG|ATP5L ATP synthase membrane subunit g protein-coding chr2-14100 chr2 200305842 200306052 + 5.42 0.000 promoter-TSS (NM_001282735) promoter-TSS (NM_001282735) 66 NM_001282743 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr11-10367 chr11 111581558 111581768 + 5.42 0.000 Intergenic L1MC5|LINE|L1 -20786 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr1-14796 chr1 71406322 71406532 + 5.42 0.000 3' UTR (NM_173808, exon 7 of 7) 3' UTR (NM_173808, exon 7 of 7) 325103 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr20-2137 chr20 36271848 36272058 + 5.42 0.000 Intergenic Intergenic -34386 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr11-6530 chr11 69466707 69466917 + 5.42 0.000 Intergenic Intergenic -18749 NR_120544 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr7-6429 chr7 158106022 158106232 + 5.42 0.000 intron (NM_130843, intron 9 of 21) intron (NM_130843, intron 9 of 21) 251542 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr5-5659 chr5 158728048 158728258 + 5.42 0.000 intron (NM_001324107, intron 11 of 15) intron (NM_001324107, intron 11 of 15) -318380 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chrX-4626 chrX 77524642 77524852 + 5.42 0.000 intron (NM_000489, intron 30 of 34) AluJr4|SINE|Alu 77358 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr2-5392 chr2 104759595 104759805 + 5.42 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -1981 NR_038231 284998 Hs.410180 NR_038231 ENSG00000234177 LINC01114 PANCAT long intergenic non-protein coding RNA 1114 ncRNA chr11-9083 chr11 30871882 30872092 + 5.42 0.000 intron (NM_001367979, intron 38 of 38) intron (NM_001367979, intron 38 of 38) 120699 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr13-3377 chr13 80824495 80824705 + 5.42 0.000 Intergenic Intergenic -193791 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA chr4-5041 chr4 141513864 141514074 + 5.42 0.000 Intergenic LTR84a|LTR|ERVL -122614 NM_000585 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr11-5290 chr11 41246314 41246524 + 5.42 0.000 intron (NM_001258419, intron 1 of 6) MER52A|LTR|ERV1 213217 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr2-9396 chr2 231444852 231445062 + 5.42 0.000 Intergenic AluSq2|SINE|Alu 10979 NR_002921 654321 Hs.674388 NR_002921 ENSG00000206885 SNORA75 SNORA75A|U23 small nucleolar RNA, H/ACA box 75 snoRNA chr2-12956 chr2 102717660 102717870 + 5.42 0.000 non-coding (NR_136173, exon 7 of 7) non-coding (NR_136173, exon 7 of 7) 19123 NR_136173 84804 Hs.590898 NM_032718 ENSG00000135953 MFSD9 - major facilitator superfamily domain containing 9 protein-coding chr11-10258 chr11 102158291 102158501 + 5.42 0.000 intron (NM_001130145, intron 2 of 8) intron (NM_001130145, intron 2 of 8) 45948 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr3-8938 chr3 14014139 14014349 + 5.42 0.000 intron (NR_002223, intron 1 of 2) L1PB1|LINE|L1 76937 NR_002223 348825 Hs.529180 NR_002223 ENSG00000180438 TPRXL TPRX3P tetrapeptide repeat homeobox like pseudo chr7-8458 chr7 48111538 48111748 + 5.42 0.000 Intergenic Intergenic 22378 NM_003364 7378 Hs.488240 NM_003364 ENSG00000183696 UPP1 UDRPASE|UP|UPASE|UPP uridine phosphorylase 1 protein-coding chr5-7327 chr5 16424372 16424582 + 5.42 0.000 intron (NR_104625, intron 7 of 8) HERVH-int|LTR|ERV1 16625 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA chr1-16017 chr1 199723526 199723736 + 5.42 0.000 Intergenic Intergenic -304079 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr8-6832 chr8 97866744 97866954 + 5.42 0.000 Intergenic AluSx1|SINE|Alu -2215 NM_001317748 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr7-5933 chr7 99716314 99716524 + 5.42 0.000 intron (NM_000765, intron 6 of 12) intron (NM_000765, intron 6 of 12) 18777 NM_000765 1551 Hs.111944 NM_000765 ENSG00000160870 CYP3A7 CP37|CYPIIIA7|P-450(HFL33)|P-450111A7|P450-HFLA cytochrome P450 family 3 subfamily A member 7 protein-coding chr3-11057 chr3 183896029 183896239 + 5.42 0.000 Intergenic Intergenic 9334 NR_039650 100616127 NR_039650 ENSG00000263932 MIR4448 - microRNA 4448 ncRNA chr21-1143 chr21 39511856 39512066 + 5.42 0.000 intron (NM_001317740, intron 5 of 5) intron (NM_001317740, intron 5 of 5) 60107 NM_007341 6450 Hs.473847 NM_007341 ENSG00000185437 SH3BGR 21-GARP SH3 domain binding glutamate rich protein protein-coding chr16-6396 chr16 54054754 54054964 + 5.42 0.000 intron (NM_001363988, intron 9 of 9) intron (NM_001363988, intron 9 of 9) 15466 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chrX-2753 chrX 129523303 129523513 + 5.42 0.000 promoter-TSS (NM_001282874) promoter-TSS (NM_001282874) 82 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr17-8464 chr17 77746464 77746674 + 5.42 0.000 Intergenic Intergenic -18010 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr18-3565 chr18 78755147 78755357 + 5.42 0.000 Intergenic Intergenic -225023 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr20-4025 chr20 36654210 36654420 + 5.42 0.000 intron (NM_032013, intron 15 of 15) intron (NM_032013, intron 15 of 15) -8119 NM_175077 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr6-6508 chr6 120080943 120081153 + 5.42 0.000 Intergenic L1MC1|LINE|L1 65869 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr10-8219 chr10 73179076 73179286 + 5.42 0.000 intron (NM_173348, intron 3 of 13) AluSc|SINE|Alu 11062 NM_173348 317662 Hs.408577 NM_173348 ENSG00000138286 FAM149B1 KIAA0974 family with sequence similarity 149 member B1 protein-coding chr11-6494 chr11 68363442 68363652 + 5.42 0.000 intron (NM_002335, intron 3 of 22) AluSx1|SINE|Alu 50956 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr20-4287 chr20 50263778 50263988 + 5.42 0.000 Intergenic Intergenic -3603 NM_001278655 100506115 Hs.235484 NM_001278655 SMIM25 GCRL1|LINC01272 small integral membrane protein 25 protein-coding chr12-7567 chr12 74519138 74519348 + 5.42 0.000 Intergenic L2a|LINE|L2 -18592 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr14-2357 chr14 26527109 26527319 + 5.42 0.000 intron (NM_001366393, intron 2 of 4) HERVL40-int|LTR|ERVL 26216 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr6-7710 chr6 88149716 88149926 + 5.42 0.000 intron (NM_001160226, intron 1 of 2) intron (NM_001160226, intron 1 of 2) -4484 NM_033181 1268 Hs.75110 NM_016083 ENSG00000118432 CNR1 CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR cannabinoid receptor 1 protein-coding chr14-4994 chr14 76494174 76494384 + 5.42 0.000 intron (NM_004452, intron 8 of 10) intron (NM_004452, intron 8 of 10) 122932 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr21-1800 chr21 38831546 38831756 + 5.42 0.000 Intergenic Intergenic 25722 NM_005239 2114 Hs.644231 NM_005239 ENSG00000157557 ETS2 ETS2IT1 ETS proto-oncogene 2, transcription factor protein-coding chr1-14662 chr1 59223586 59223796 + 5.42 0.000 Intergenic MIRb|SINE|MIR -73122 NM_001350796 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr1-11014 chr1 220663133 220663343 + 5.42 0.000 3' UTR (NM_001286128, exon 16 of 16) 3' UTR (NM_001286128, exon 16 of 16) -27125 NM_024709 79762 Hs.519839 NM_024709 ENSG00000162817 C1orf115 - chromosome 1 open reading frame 115 protein-coding chr16-5760 chr16 87058044 87058254 + 5.42 0.000 non-coding (NR_126008, exon 1 of 3) non-coding (NR_126008, exon 1 of 3) 365 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr2-10617 chr2 9193743 9193953 + 5.42 0.000 Intergenic Intergenic -12917 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr7-7293 chr7 39413894 39414104 + 5.42 0.000 intron (NM_001370959, intron 6 of 9) CpG -7653 NR_046711 100861520 Hs.571292 NR_046711 ENSG00000224122 POU6F2-AS1 - POU6F2 antisense RNA 1 ncRNA chr14-5412 chr14 104390261 104390471 + 5.42 0.000 Intergenic Intergenic 166782 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr11-9252 chr11 42826456 42826666 + 5.42 0.000 Intergenic Intergenic 442808 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo chr17-4665 chr17 19713710 19713920 + 5.42 0.000 intron (NR_135625, intron 4 of 15) CpG 2769 NM_152908 146802 Hs.126830 NM_152908 ENSG00000180638 SLC47A2 MATE2|MATE2-B|MATE2-K|MATE2K solute carrier family 47 member 2 protein-coding chr5-4589 chr5 28066553 28066763 + 5.42 0.000 Intergenic L1PA13|LINE|L1 221007 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr6-8288 chr6 142824696 142824906 + 5.42 0.000 intron (NM_006734, intron 2 of 9) intron (NM_006734, intron 2 of 9) 120375 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr20-3050 chr20 3081855 3082065 + 5.42 0.000 TTS (NM_000490) TTS (NM_000490) 2764 NM_000490 551 Hs.89648 NM_000490 ENSG00000101200 AVP ADH|ARVP|AVP-NPII|AVRP|VP arginine vasopressin protein-coding chr11-9774 chr11 69569002 69569212 + 5.42 0.000 Intergenic Intergenic -71998 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr4-2428 chr4 140253022 140253232 + 5.42 0.000 Intergenic CpG -4181 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr9-5048 chr9 31807994 31808204 + 5.42 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -426609 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr4-8089 chr4 123754485 123754695 + 5.42 0.000 intron (NR_027105, intron 3 of 5) L1ME3A|LINE|L1 -19674 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr4-8294 chr4 143042748 143042958 + 5.42 0.000 Intergenic L1PB4|LINE|L1 142008 NR_136203 105377623 NR_136203 ENSG00000250326 LOC105377623 - uncharacterized LOC105377623 ncRNA chr8-5457 chr8 41992317 41992527 + 5.42 0.000 intron (NM_001305878, intron 2 of 13) intron (NM_001305878, intron 2 of 13) -59328 NR_136589 105379393 Hs.742878 NR_136589 LOC105379393 - uncharacterized LOC105379393 ncRNA chr12-7611 chr12 79326827 79327037 + 5.42 0.000 intron (NM_001291901, intron 7 of 9) intron (NM_001291901, intron 7 of 9) -92325 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr7-4878 chr7 112712614 112712824 + 5.42 0.000 Intergenic Intergenic 77674 NM_022484 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding chr1-13080 chr1 180899683 180899893 + 5.42 0.000 Intergenic Intergenic -13109 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr7-4887 chr7 117513042 117513252 + 5.42 0.000 intron (NM_000492, intron 3 of 26) LTR49|LTR|ERV1 33184 NM_000492 1080 Hs.489786 NM_000492 ENSG00000001626 CFTR ABC35|ABCC7|CF|CFTR/MRP|MRP7|TNR-CFTR|dJ760C5.1 CF transmembrane conductance regulator protein-coding chr2-12342 chr2 49093960 49094170 + 5.42 0.000 intron (NM_000145, intron 1 of 9) L1ME1|LINE|L1 34462 NR_107011 102465854 NR_107011 ENSG00000212036 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA chr10-5995 chr10 124884189 124884399 + 5.42 0.000 Intergenic Intergenic -57829 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr10-7269 chr10 127862346 127862556 + 5.42 0.000 Intergenic Intergenic 30490 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chr14-4354 chr14 23600368 23600578 + 5.42 0.000 Intergenic Intergenic -21683 NM_032452 84502 Hs.597841 NM_032452 ENSG00000092051 JPH4 JP4|JPHL1 junctophilin 4 protein-coding chr12-6976 chr12 29119029 29119239 + 5.42 0.000 Intergenic THE1C|LTR|ERVL-MaLR -30144 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr10-7460 chr10 8177708 8177918 + 5.42 0.000 Intergenic AluJo|SINE|Alu 90492 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chr4-5629 chr4 4656147 4656357 + 5.42 0.000 intron (NR_037888, intron 4 of 5) MSTA|LTR|ERVL-MaLR -8074 NR_145783 109623454 NR_145783 SNORD162 - small nucleolar RNA, C/D box 162 snoRNA chr2-13026 chr2 108208566 108208776 + 5.42 0.000 intron (NR_131251, intron 1 of 4) L1PA3|LINE|L1 9170 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA chr10-8192 chr10 71735629 71735839 + 5.42 0.000 intron (NM_022124, intron 32 of 67) intron (NM_022124, intron 32 of 67) 2116 NM_001168390 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr6-6296 chr6 41421827 41422037 + 5.42 0.000 Intergenic Intergenic -80512 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr11-3877 chr11 88646914 88647124 + 5.42 0.000 intron (NM_001143831, intron 3 of 8) MLT1C|LTR|ERVL-MaLR 142443 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr7-8552 chr7 56174473 56174683 + 5.42 0.000 Intergenic Intergenic -58161 NM_001145712 389493 Hs.177948 NM_001145712 ENSG00000185290 NUPR2 NUPR1L nuclear protein 2, transcriptional regulator protein-coding chr8-4141 chr8 75030873 75031083 + 5.42 0.000 intron (NM_031461, intron 14 of 14) MIRb|SINE|MIR 30823 NM_001286778 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr1-16303 chr1 215790815 215791025 + 5.42 0.000 intron (NM_206933, intron 50 of 71) intron (NM_206933, intron 50 of 71) 223616 NM_001319294 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr10-8859 chr10 111570117 111570327 + 5.42 0.000 Intergenic THE1C|LTR|ERVL-MaLR 455931 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr19-5813 chr19 38541170 38541380 + 5.42 0.000 intron (NM_001042723, intron 83 of 104) intron (NM_001042723, intron 83 of 104) -55072 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr7-8802 chr7 82904016 82904226 + 5.42 0.000 intron (NM_033026, intron 8 of 24) intron (NM_033026, intron 8 of 24) 258763 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr2-8201 chr2 94645490 94645700 + 5.42 0.000 Intergenic L1PA4|LINE|L1 -58412 NR_024443 100133920 Hs.645503 NR_024443 ENSG00000261522 LOC100133920 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like pseudogene pseudo chr12-6113 chr12 125676395 125676605 + 5.42 0.000 Intergenic Intergenic 54048 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr17-5785 chr17 62682445 62682655 + 5.42 0.000 intron (NM_006039, intron 20 of 29) intron (NM_006039, intron 20 of 29) -23656 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr3-5040 chr3 36105538 36105748 + 5.42 0.000 Intergenic L1ME1|LINE|L1 -274844 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr20-1900 chr20 58515260 58515470 + 5.42 0.000 promoter-TSS (NM_153360) promoter-TSS (NM_153360) -14 NR_034147 149773 Hs.685214 NR_034147 ENSG00000231290 APCDD1L-DT APCDD1L-AS1 APCDD1L divergent transcript ncRNA chr3-10658 chr3 149512357 149512567 + 5.42 0.000 Intergenic Intergenic 37765 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr3-8316 chr3 64588229 64588439 + 5.42 0.000 non-coding (NR_110150, exon 3 of 3) non-coding (NR_110150, exon 3 of 3) 26988 NR_110150 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chrX-5406 chrX 152922336 152922546 + 5.42 0.000 intron (NM_001178113, intron 4 of 14) intron (NM_001178113, intron 4 of 14) 4576 NM_001178113 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chrX-4596 chrX 72652856 72653066 + 5.42 0.000 intron (NM_002637, intron 11 of 31) intron (NM_002637, intron 11 of 31) -35988 NR_110391 101928259 Hs.666679 NR_110391 ENSG00000231944 PHKA1-AS1 - PHKA1 antisense RNA 1 ncRNA chr17-4470 chr17 61390203 61390413 + 5.42 0.000 intron (NM_001320470, intron 25 of 25) intron (NM_001320470, intron 25 of 25) 9298 NR_125751 103689912 Hs.410998 NR_125749 ENSG00000267280 TBX2-AS1 - TBX2 antisense RNA 1 ncRNA chr11-7329 chr11 64133400 64133610 + 5.42 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) 29615 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr7-7536 chr7 108434595 108434805 + 5.42 0.000 intron (NM_001371132, intron 1 of 30) L1MB7|LINE|L1 21697 NM_001193583 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr16-5952 chr16 4139250 4139460 + 5.42 0.000 Intergenic Intergenic -22913 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr4-4749 chr4 95818235 95818445 + 5.42 0.000 Intergenic AluSc|SINE|Alu -21753 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding chr7-7635 chr7 138705413 138705623 + 5.42 0.000 TTS (NM_020632) TTS (NM_020632) -26473 NM_001139456 136306 Hs.99414 NM_174959 ENSG00000157703 SVOPL - SVOP like protein-coding chr4-4785 chr4 101925083 101925293 + 5.42 0.000 intron (NM_017935, intron 7 of 16) L3b|LINE|CR1 111346 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr1-13958 chr1 24567105 24567315 + 5.42 0.000 intron (NM_001010980, intron 1 of 3) L2c|LINE|L2 11123 NM_001010980 400746 Hs.200253 NM_001010980 ENSG00000184454 NCMAP C1orf130|MP11 non-compact myelin associated protein protein-coding chr22-3942 chr22 37181116 37181326 + 5.42 0.000 3' UTR (NM_001365878, exon 5 of 5) 3' UTR (NM_001365878, exon 5 of 5) -6103 NM_001346222 3560 Hs.474787 NM_000878 ENSG00000100385 IL2RB CD122|IL15RB|P70-75 interleukin 2 receptor subunit beta protein-coding chr9-5404 chr9 94445035 94445245 + 5.42 0.000 exon (NM_032558, exon 6 of 12) exon (NM_032558, exon 6 of 12) 70571 NM_032558 84641 Hs.555996 NM_032558 ENSG00000148110 MFSD14B HIATL1 major facilitator superfamily domain containing 14B protein-coding chr15-4308 chr15 39262162 39262372 + 5.42 0.000 Intergenic L1PA6|LINE|L1 11598 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr9-4009 chr9 34780142 34780352 + 5.42 0.000 Intergenic L1MB4|LINE|L1 -50759 NM_001141917 259308 Hs.522093 NM_001141917 ENSG00000205108 FAM205A C9orf144B family with sequence similarity 205 member A protein-coding chr18-2955 chr18 21899015 21899225 + 5.42 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -67714 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA chr16-6723 chr16 72777129 72777339 + 5.42 0.000 Intergenic Intergenic -112264 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr7-5006 chr7 631327 631537 + 5.42 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 28034 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chrX-5399 chrX 152493910 152494120 + 5.42 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -42700 NM_000808 2556 Hs.123024 NM_000808 ENSG00000011677 GABRA3 - gamma-aminobutyric acid type A receptor alpha3 subunit protein-coding chr11-10023 chr11 81929385 81929595 + 5.42 0.000 intron (NR_120571, intron 6 of 7) intron (NR_120571, intron 6 of 7) -38654 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr6-7108 chr6 34657316 34657526 + 5.42 0.000 intron (NM_022758, intron 1 of 3) intron (NM_022758, intron 1 of 3) -38733 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr4-7723 chr4 89862942 89863152 + 5.42 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 -16464 NM_001371403 chr5-3542 chr5 32020397 32020607 + 5.42 0.000 intron (NM_178140, intron 6 of 24) intron (NM_178140, intron 6 of 24) -84343 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr6-5853 chr6 35813078 35813288 + 5.42 0.000 intron (NM_182548, intron 1 of 3) MER5A|DNA|hAT-Charlie 7831 NM_182548 222662 Hs.367947 NM_182548 ENSG00000197753 LHFPL5 DFNB67|TMHS|dJ510O8.8 LHFPL tetraspan subfamily member 5 protein-coding chr5-6114 chr5 27006385 27006595 + 5.42 0.000 intron (NM_016279, intron 1 of 11) LTR33|LTR|ERVL 32096 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr1-15135 chr1 103109074 103109284 + 5.42 0.000 promoter-TSS (NR_134980) promoter-TSS (NR_134980) -657 NM_080630 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr10-8395 chr10 83108346 83108556 + 5.42 0.000 Intergenic L1PA5|LINE|L1 568638 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr2-13222 chr2 123019541 123019751 + 5.42 0.000 Intergenic Intergenic 53835 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr10-8539 chr10 93181412 93181622 + 5.42 0.000 Intergenic Intergenic 107624 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr5-7267 chr5 13214794 13215004 + 5.42 0.000 Intergenic Intergenic -182013 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr1-15773 chr1 174659829 174660039 + 5.42 0.000 intron (NM_001366446, intron 14 of 25) MER70C|LTR|ERVL -40605 NM_001366451 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr2-7998 chr2 67050463 67050673 + 5.42 0.000 Intergenic L1MB2|LINE|L1 -35878 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA chr4-8080 chr4 123103043 123103253 + 5.42 0.000 intron (NM_001345856, intron 14 of 15) intron (NM_001345856, intron 14 of 15) 180070 NM_001317799 166378 Hs.709648 NM_145207 ENSG00000145375 SPATA5 AFG2|EHLMRS|SPAF spermatogenesis associated 5 protein-coding chr21-387 chr21 33266300 33266510 + 5.42 0.000 promoter-TSS (NM_000628) promoter-TSS (NM_000628) 38 NM_000628 3588 Hs.654593 NM_000628 ENSG00000243646 IL10RB CDW210B|CRF2-4|CRFB4|D21S58|D21S66|IL-10R2 interleukin 10 receptor subunit beta protein-coding chr12-8288 chr12 125973374 125973584 + 5.42 0.000 intron (NR_034132, intron 1 of 5) AluSg4|SINE|Alu 9895 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr6-8016 chr6 117641585 117641795 + 5.42 0.000 Intergenic L1MB2|LINE|L1 33594 NR_110854 101927919 Hs.467500 NR_110854 LOC101927919 - uncharacterized LOC101927919 ncRNA chr9-7643 chr9 42275888 42276098 + 5.42 0.000 Intergenic Intergenic 77131 NR_126166 100996582 NR_126166 FAM74A7 - family with sequence similarity 74 member A7 ncRNA chr4-7782 chr4 96184903 96185113 + 5.42 0.000 Intergenic Intergenic -125695 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chrX-2521 chrX 96815567 96815777 + 5.42 0.000 intron (NM_007309, intron 4 of 26) AluSx|SINE|Alu -68236 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr6-7374 chr6 49107521 49107731 + 5.42 0.000 Intergenic (AGTGCT)n|Simple_repeat|Simple_repeat 355627 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr15-2858 chr15 41578581 41578791 + 5.42 0.000 3' UTR (NM_006293, exon 19 of 19) 3' UTR (NM_006293, exon 19 of 19) 18714 NM_001330264 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chrX-5402 chrX 152735697 152735907 + 5.42 0.000 intron (NM_001166386, intron 2 of 2) intron (NM_001166386, intron 2 of 2) 1940 NM_001166386 4111 Hs.169246 NM_005367 ENSG00000213401 MAGEA12 CT1.12|MAGE12 MAGE family member A12 protein-coding chr7-3089 chr7 4958032 4958242 + 5.42 0.000 intron (NR_072989, intron 1 of 8) intron (NR_072989, intron 1 of 8) 1050 NM_001270375 221938 Hs.558694 NM_198403 ENSG00000136297 MMD2 PAQR10 monocyte to macrophage differentiation associated 2 protein-coding chr2-11691 chr2 9063483 9063693 + 5.42 0.000 Intergenic Intergenic -59904 NM_001321267 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chrX-5176 chrX 133176516 133176726 + 5.42 0.000 Intergenic Intergenic 41733 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr4-6174 chr4 41101426 41101636 + 5.42 0.000 intron (NM_173075, intron 2 of 16) intron (NM_173075, intron 2 of 16) 113011 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chrX-1636 chrX 123903073 123903283 + 5.42 0.000 intron (NM_001167, intron 6 of 6) MIR3|SINE|MIR 43011 NM_001167 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr1-10175 chr1 110427850 110428060 + 5.42 0.000 Intergenic Intergenic -20031 NM_006402 10542 Hs.439815 NM_006402 ENSG00000134248 LAMTOR5 HBXIP|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding chr11-8637 chr11 2611696 2611906 + 5.42 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 88197 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr7-7056 chr7 148006155 148006365 + 5.42 0.000 intron (NM_014141, intron 14 of 22) intron (NM_014141, intron 14 of 22) 334581 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr3-7368 chr3 53764142 53764352 + 5.42 0.000 intron (NM_001128839, intron 30 of 45) intron (NM_001128839, intron 30 of 45) 82172 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr1-15786 chr1 175752213 175752423 + 5.42 0.000 Intergenic MIR|SINE|MIR -8723 NM_001328635 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr19-6849 chr19 43021002 43021212 + 5.42 0.000 intron (NM_203287, intron 1 of 4) L1MCa|LINE|L1 5362 NM_001113410 5680 Hs.741150 NM_002785 ENSG00000243130 PSG11 PSBG-11|PSBG-13|PSG13|PSG14 pregnancy specific beta-1-glycoprotein 11 protein-coding chrX-5059 chrX 123897428 123897638 + 5.42 0.000 intron (NM_001167, intron 5 of 6) intron (NM_001167, intron 5 of 6) 37366 NM_001167 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chrX-3430 chrX 17715662 17715872 + 5.42 0.000 intron (NM_001291868, intron 3 of 7) L1PA13|LINE|L1 -21682 NM_001037535 6322 Hs.109655 NM_006746 ENSG00000047634 SCML1 - Scm polycomb group protein like 1 protein-coding chr2-13273 chr2 127695667 127695877 + 5.42 0.000 Intergenic CpG -5725 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding chr10-9170 chr10 129772789 129772999 + 5.42 0.000 Intergenic Intergenic 70480 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr10-9038 chr10 123659576 123659786 + 5.42 0.000 Intergenic Intergenic -6674 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr2-6429 chr2 149418263 149418473 + 5.42 0.000 intron (NM_194317, intron 1 of 4) L1M5|LINE|L1 87781 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr4-7800 chr4 98046842 98047052 + 5.42 0.000 intron (NM_174952, intron 5 of 10) L1M3de|LINE|L1 96529 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr6-4233 chr6 5752338 5752548 + 5.42 0.000 intron (NM_006567, intron 6 of 6) intron (NM_006567, intron 6 of 6) -57171 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chrX-2794 chrX 133487009 133487219 + 5.42 0.000 Intergenic Intergenic -71625 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr2-10552 chr2 238025326 238025536 + 5.42 0.000 intron (NR_103499, intron 6 of 7) intron (NR_103499, intron 6 of 7) -35570 NM_016510 51540 Hs.731909 NM_016510 ENSG00000132330 SCLY SCL|hSCL selenocysteine lyase protein-coding chr12-4714 chr12 50128831 50129041 + 5.42 0.000 TTS (NM_001331070) TTS (NM_001331070) 16700 NM_001257134 84987 Hs.388645 NM_032901 ENSG00000178449 COX14 C12orf62|PCAG1 cytochrome c oxidase assembly factor COX14 protein-coding chr20-1781 chr20 56374024 56374234 + 5.42 0.000 intron (NM_198433, intron 8 of 10) intron (NM_198433, intron 8 of 10) 15155 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding chr7-6143 chr7 124437701 124437911 + 5.42 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -85710 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr17-7070 chr17 65449201 65449411 + 5.42 0.000 Intergenic Intergenic -8235 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr8-7335 chr8 134325679 134325889 + 5.42 0.000 Intergenic Intergenic -272287 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr10-7511 chr10 13266523 13266733 + 5.42 0.000 Intergenic AluSx|SINE|Alu -32254 NM_001303118 221044 Hs.112998 NM_145314 ENSG00000165623 UCMA C10orf49|GRP|GRP/UCMA upper zone of growth plate and cartilage matrix associated protein-coding chr14-4023 chr14 48150225 48150435 + 5.42 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -355316 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr7-9209 chr7 116998804 116999014 + 5.42 0.000 intron (NR_161423, intron 1 of 13) L2a|LINE|L2 -16003 NM_001369602 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr17-5336 chr17 28896347 28896557 + 5.42 0.000 intron (NM_004475, intron 1 of 10) intron (NM_004475, intron 1 of 10) 1281 NM_004475 2319 Hs.514038 NM_004475 ENSG00000132589 FLOT2 ECS-1|ECS1|ESA|ESA1|M17S1 flotillin 2 protein-coding chr20-1542 chr20 53550769 53550979 + 5.42 0.000 Intergenic AluJb|SINE|Alu -1896 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr4-8040 chr4 120322704 120322914 + 5.42 0.000 Intergenic Intergenic -255961 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr20-4428 chr20 60688302 60688512 + 5.42 0.000 Intergenic L1ME3Cz|LINE|L1 123845 NR_039653 100616440 NR_039653 ENSG00000265617 MIR548AG2 - microRNA 548ag-2 ncRNA chr11-7439 chr11 117646828 117647038 + 5.42 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 150283 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr12-2188 chr12 8390486 8390696 + 5.42 0.000 non-coding (NR_024420, exon 1 of 2) non-coding (NR_024420, exon 1 of 2) 161 NR_024420 389634 Hs.434403 NM_001012988 ENSG00000226091 LINC00937 - long intergenic non-protein coding RNA 937 ncRNA chr2-12050 chr2 30412324 30412534 + 5.42 0.000 Intergenic Intergenic -34817 NM_001002257 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr5-5393 chr5 134975722 134975932 + 5.42 0.000 intron (NM_178019, intron 2 of 7) L1MA6|LINE|L1 7920 NM_178019 347732 Hs.631804 NM_178019 ENSG00000152705 CATSPER3 CACRC cation channel sperm associated 3 protein-coding chr4-7781 chr4 95952177 95952387 + 5.42 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 112189 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding chr10-7212 chr10 115402744 115402954 + 5.42 0.000 intron (NM_207303, intron 20 of 28) intron (NM_207303, intron 20 of 28) 309484 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr2-7989 chr2 66058701 66058911 + 5.42 0.000 Intergenic L1ME1|LINE|L1 299522 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr12-5008 chr12 81246289 81246499 + 5.42 0.000 intron (NM_024560, intron 13 of 15) L1MDa|LINE|L1 -32795 NR_120491 102724663 Hs.667264 NR_120491 ENSG00000257467 PPFIA2-AS1 - PPFIA2 antisense RNA 1 ncRNA chr4-5462 chr4 47102114 47102324 + 5.42 0.000 intron (NM_000812, intron 3 of 8) intron (NM_000812, intron 3 of 8) 70652 NM_000812 2560 Hs.27283 NM_000812 ENSG00000163288 GABRB1 EIEE45 gamma-aminobutyric acid type A receptor beta1 subunit protein-coding chr21-905 chr21 24336522 24336732 + 5.42 0.000 Intergenic LTR52|LTR|ERVL -15250 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr8-5397 chr8 26945285 26945495 + 5.42 0.000 Intergenic L1PB1|LINE|L1 -78112 NM_000680 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr8-6943 chr8 104438452 104438662 + 5.42 0.000 intron (NM_001385, intron 4 of 9) HAL1ME|LINE|L1 28498 NM_001385 1807 Hs.443161 NM_001385 ENSG00000147647 DPYS DHP|DHPase dihydropyrimidinase protein-coding chr19-3735 chr19 45242883 45243093 + 5.42 0.000 Intergenic L1ME3Cz|LINE|L1 -8283 NM_031417 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr3-6605 chr3 126301280 126301490 + 5.42 0.000 Intergenic Intergenic 56023 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr2-14607 chr2 233640482 233640692 + 5.42 0.000 intron (NM_019075, intron 1 of 4) L1M4|LINE|L1 4110 NM_019075 54575 Hs.554822 NM_019075 ENSG00000242515 UGT1A10 GNT1|UDPGT|UGT-1A|UGT-1J|UGT1|UGT1-01|UGT1-10|UGT1.1|UGT1.10|UGT1A|UGT1A1|UGT1J|hUG-BR1 UDP glucuronosyltransferase family 1 member A10 protein-coding chr11-9975 chr11 77486766 77486976 + 5.42 0.000 Intergenic L1M1|LINE|L1 -12808 NM_001128620 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr11-10766 chr11 134772225 134772435 + 5.42 0.000 Intergenic AluJo|SINE|Alu 36385 NR_147836 729305 Hs.148365 NR_147836 ENSG00000251226 LINC02714 - long intergenic non-protein coding RNA 2714 ncRNA chr3-11245 chr3 196890101 196890311 + 5.42 0.000 intron (NM_152699, intron 2 of 9) intron (NM_152699, intron 2 of 9) 22286 NM_152699 205564 Hs.240770 NM_152699 ENSG00000119231 SENP5 - SUMO specific peptidase 5 protein-coding KI270728.1-3 KI270728.1 1121354 1121564 + 5.42 0.000 NA NA NA NA chr9-3336 chr9 98400047 98400257 + 5.42 0.000 intron (NM_005458, intron 8 of 18) AluJr|SINE|Alu -144503 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr2-13558 chr2 154225534 154225744 + 5.42 0.000 intron (NM_052917, intron 4 of 12) MER39B|LTR|ERV1 231799 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr18-3228 chr18 47915543 47915753 + 5.42 0.000 intron (NM_001003652, intron 1 of 10) intron (NM_001003652, intron 1 of 10) 15011 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr3-10518 chr3 138012055 138012265 + 5.42 0.000 intron (NM_016369, intron 1 of 4) intron (NM_016369, intron 1 of 4) 1995 NM_016369 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr14-4995 chr14 76573559 76573769 + 5.42 0.000 Intergenic Intergenic -187804 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr11-9188 chr11 36487564 36487774 + 5.42 0.000 3' UTR (NM_004620, exon 7 of 7) 3' UTR (NM_004620, exon 7 of 7) 22603 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr2-10950 chr2 83726503 83726713 + 5.42 0.000 Intergenic L1MA1|LINE|L1 203794 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr3-5527 chr3 197398 197608 + 5.42 0.000 promoter-TSS (NR_045572) promoter-TSS (NR_045572) -162 NR_144486 101927174 Hs.570612 NR_144486 ENSG00000224318 CHL1-AS2 - CHL1 antisense RNA 2 ncRNA chr13-2307 chr13 32060609 32060819 + 5.42 0.000 intron (NM_023037, intron 1 of 60) intron (NM_023037, intron 1 of 60) 28940 NM_023037 10129 Hs.507669 NM_023037 ENSG00000073910 FRY 13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1 FRY microtubule binding protein protein-coding chr17-6607 chr17 58593548 58593758 + 5.42 0.000 exon (NM_001201457, exon 15 of 33) exon (NM_001201457, exon 15 of 33) -49325 NM_001038704 5414 Hs.287518 NM_004574 ENSG00000108387 SEPTIN4 ARTS|BRADEION|C17orf47|CE5B3|H5|MART|PNUTL2|SEP4|SEPT4|hCDCREL-2|hucep-7 septin 4 protein-coding chr11-10591 chr11 123518203 123518413 + 5.42 0.000 intron (NM_001330396, intron 2 of 19) intron (NM_001330396, intron 2 of 19) -7318 NM_001286563 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr1-12755 chr1 68608117 68608327 + 5.42 0.000 Intergenic L1M2b|LINE|L1 -111140 NM_017779 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding chr20-1916 chr20 4083331 4083541 + 5.42 0.000 Intergenic L1MB5|LINE|L1 -65343 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr22-2897 chr22 46329700 46329910 + 5.42 0.000 intron (NM_016426, intron 11 of 11) intron (NM_016426, intron 11 of 11) -5596 NR_104240 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr3-9748 chr3 69097488 69097698 + 5.42 0.000 intron (NM_006407, intron 1 of 2) intron (NM_006407, intron 1 of 2) 12656 NM_006407 10550 Hs.518060 NM_006407 ENSG00000144746 ARL6IP5 DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx ADP ribosylation factor like GTPase 6 interacting protein 5 protein-coding chr4-5116 chr4 149715256 149715466 + 5.42 0.000 intron (NM_001363507, intron 5 of 13) MER52A|LTR|ERV1 100482 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr3-6543 chr3 119293549 119293759 + 5.42 0.000 promoter-TSS (NM_020754) promoter-TSS (NM_020754) -729 NM_020754 57514 Hs.668218 NM_020754 ENSG00000031081 ARHGAP31 AOS1|CDGAP Rho GTPase activating protein 31 protein-coding chr1-15518 chr1 156618283 156618493 + 5.42 0.000 intron (NR_135113, intron 1 of 1) AluJr|SINE|Alu -1027 NM_021817 60484 Hs.410719 NM_021817 ENSG00000132702 HAPLN2 BRAL1 hyaluronan and proteoglycan link protein 2 protein-coding chr20-644 chr20 1225695 1225905 + 5.42 0.000 promoter-TSS (NM_001136566) promoter-TSS (NM_001136566) -320 NM_001136566 642636 Hs.713451 NM_001136566 ENSG00000244588 RAD21L1 RAD21L|dJ545L17.2 RAD21 cohesin complex component like 1 protein-coding chrX-3792 chrX 136531799 136532009 + 5.42 0.000 promoter-TSS (NM_016267) promoter-TSS (NM_016267) -311 NM_016267 51442 Hs.496843 NM_016267 ENSG00000102243 VGLL1 TDU|VGL1 vestigial like family member 1 protein-coding chr11-8543 chr11 131640529 131640739 + 5.42 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 22922 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr13-3450 chr13 109776086 109776296 + 5.42 0.000 intron (NM_003749, intron 1 of 1) intron (NM_003749, intron 1 of 1) 10392 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr1-15033 chr1 93642418 93642628 + 5.42 0.000 intron (NM_001261409, intron 2 of 11) intron (NM_001261409, intron 2 of 11) -28426 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr3-10496 chr3 135816064 135816274 + 5.42 0.000 Intergenic L1M1|LINE|L1 -149559 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr17-6957 chr17 44334531 44334741 + 5.42 0.000 Intergenic Intergenic -9766 NM_016016 51629 Hs.744880 NM_016016 ENSG00000013306 SLC25A39 CGI-69|CGI69 solute carrier family 25 member 39 protein-coding chr11-3908 chr11 117975129 117975339 + 5.42 0.000 Intergenic AluY|SINE|Alu -11157 NM_001558 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding chr2-11768 chr2 12613298 12613508 + 5.42 0.000 Intergenic Intergenic -103469 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr13-2811 chr13 102509224 102509434 + 5.42 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -87657 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr20-2385 chr20 18025393 18025603 + 5.42 0.000 intron (NM_001303461, intron 3 of 3) AluSz|SINE|Alu 32418 NM_021220 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr8-7202 chr8 125644350 125644560 + 5.42 0.000 Intergenic MIRb|SINE|MIR 212246 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chrX-2912 chrX 151411695 151411905 + 5.42 0.000 Intergenic Intergenic 14615 NM_001017980 203547 Hs.58633 NM_001017980 ENSG00000160131 VMA21 MEAX|XMEA vacuolar ATPase assembly factor VMA21 protein-coding chr4-5406 chr4 5216489 5216699 + 5.42 0.000 intron (NM_001306082, intron 4 of 12) L2a|LINE|L2 165114 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr13-4353 chr13 103608466 103608676 + 5.42 0.000 Intergenic LTR16C|LTR|ERVL 183371 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr2-11651 chr2 6560942 6561152 + 5.42 0.000 Intergenic L2a|LINE|L2 72740 NR_110500 102800315 Hs.729713 NR_110498 ENSG00000236172 LINC01246 - long intergenic non-protein coding RNA 1246 ncRNA chr21-1411 chr21 9789589 9789799 + 5.42 0.000 intron (NR_038377, intron 4 of 5) intron (NR_038377, intron 4 of 5) 31367 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr1-8291 chr1 42132913 42133123 + 5.42 0.000 Intergenic Intergenic -20392 NM_007102 2981 Hs.32966 NM_007102 ENSG00000044012 GUCA2B GCAP-II|UGN guanylate cyclase activator 2B protein-coding chr20-3958 chr20 34401777 34401987 + 5.42 0.000 intron (NM_001257138, intron 3 of 23) intron (NM_001257138, intron 3 of 23) 38609 NM_031483 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr4-6654 chr4 2174066 2174276 + 5.42 0.000 intron (NM_181808, intron 10 of 25) intron (NM_181808, intron 10 of 25) 67950 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr13-1144 chr13 31282556 31282766 + 5.42 0.000 intron (NM_194318, intron 10 of 14) AluY|SINE|Alu 82686 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr15-2969 chr15 50528426 50528636 + 5.42 0.000 intron (NM_203494, intron 6 of 6) intron (NM_203494, intron 6 of 6) 18135 NM_203494 373509 Hs.677758 NM_203494 ENSG00000170236 USP50 - ubiquitin specific peptidase 50 protein-coding chr6-4825 chr6 82102805 82103015 + 5.42 0.000 Intergenic L1PA2|LINE|L1 -1145 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr9-6403 chr9 35931029 35931239 + 5.42 0.000 Intergenic Intergenic 21644 NM_001348107 158376 Hs.302677 NM_001348107 ENSG00000235387 SPAAR LINC00961|SPAR small regulatory polypeptide of amino acid response protein-coding chr18-3451 chr18 67782802 67783012 + 5.42 0.000 intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) 31915 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr11-9120 chr11 33165576 33165786 + 5.42 0.000 intron (NR_034027, intron 1 of 3) intron (NR_034027, intron 1 of 3) 4024 NR_034027 338739 Hs.423476 NR_034027 ENSG00000247151 CSTF3-DT CSTF3-AS1 CSTF3 divergent transcript ncRNA chr19-5443 chr19 29129256 29129466 + 5.42 0.000 Intergenic Intergenic 83790 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr6-7821 chr6 101228132 101228342 + 5.42 0.000 Intergenic HERVE-int|LTR|ERV1 -170748 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr12-7654 chr12 83146185 83146395 + 5.42 0.000 Intergenic L2c|LINE|L2 459135 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr15-5075 chr15 86110174 86110384 + 5.42 0.000 intron (NR_120368, intron 1 of 5) Tigger2a|DNA|TcMar-Tigger 6438 NR_120368 101929701 Hs.132570 NR_120368 ENSG00000260477 LINC01584 - long intergenic non-protein coding RNA 1584 ncRNA chr11-7841 chr11 114527901 114528111 + 5.42 0.000 intron (NM_152315, intron 3 of 5) intron (NM_152315, intron 3 of 5) 31875 NM_001367953 120400 Hs.550126 NM_152315 ENSG00000095110 NXPE1 FAM55A neurexophilin and PC-esterase domain family member 1 protein-coding chr1-14850 chr1 77253447 77253657 + 5.42 0.000 Intergenic L1M1|LINE|L1 -28467 NM_174858 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr1-15387 chr1 151017313 151017523 + 5.42 0.000 intron (NR_130130, intron 1 of 3) MIRc|SINE|MIR 8969 NR_130132 58497 Hs.78524 NM_021222 ENSG00000143363 PRUNE1 DRES-17|DRES17|H-PRUNE|HTCD37|NMIHBA|PRUNE prune exopolyphosphatase 1 protein-coding chr9-6759 chr9 21285055 21285265 + 5.42 0.000 Intergenic Intergenic -6597 NR_036676 3453 Hs.545842 NR_036676 IFNA22P IFNAP22 interferon alpha 22, pseudogene pseudo KZ208914.1-1 KZ208914.1 146306 146472 + 5.42 0.000 NA NA NA NA chr6-7557 chr6 71707108 71707318 + 5.42 0.000 Intergenic Intergenic -179490 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr13-1991 chr13 28316462 28316672 + 5.42 0.000 intron (NM_002019, intron 25 of 29) intron (NM_002019, intron 25 of 29) -177393 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr7-9118 chr7 107724372 107724582 + 5.42 0.000 Intergenic Intergenic 19155 NR_144536 101927974 Hs.432792 NR_144536 ENSG00000241764 LOC101927974 - uncharacterized LOC101927974 ncRNA chr10-8046 chr10 63954692 63954902 + 5.42 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -432907 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chrX-3402 chrX 6455725 6455935 + 5.42 0.000 Intergenic MLT2A2|LTR|ERVL -71867 NR_039927 100616373 NR_039927 ENSG00000265284 MIR4770 - microRNA 4770 ncRNA chr5-8270 chr5 112640607 112640817 + 5.42 0.000 Intergenic Intergenic 12276 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr11-10461 chr11 117604889 117605099 + 5.42 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 192222 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr6-6156 chr6 2723099 2723309 + 5.42 0.000 intron (NM_001012418, intron 2 of 12) AluJb|SINE|Alu 27718 NM_001012418 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr21-1900 chr21 44405834 44406044 + 5.42 0.000 exon (NM_001320351, exon 18 of 31) exon (NM_001320351, exon 18 of 31) -19590 NM_001320352 7226 Hs.369759 NM_003307 ENSG00000142185 TRPM2 EREG1|KNP3|LTRPC2|LTrpC-2|NUDT9H|NUDT9L1|TRPC7 transient receptor potential cation channel subfamily M member 2 protein-coding chr10-8063 chr10 65859962 65860172 + 5.42 0.000 Intergenic (TGTATG)n|Simple_repeat|Simple_repeat 288642 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr19-7103 chr19 57587550 57587760 + 5.42 0.000 intron (NM_001010879, intron 2 of 3) MLT1A0|LTR|ERVL-MaLR 3510 NM_001321146 284307 Hs.454830 NM_001010879 ENSG00000171649 ZIK1 ZNF762 zinc finger protein interacting with K protein 1 protein-coding chr8-2626 chr8 64880022 64880232 + 5.42 0.000 Intergenic AluSg|SINE|Alu -81390 NM_004820 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding chr4-2525 chr4 41360548 41360758 + 5.42 0.000 promoter-TSS (NM_001330792) promoter-TSS (NM_001330792) -154 NM_001330788 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chrX-3779 chrX 133338769 133338979 + 5.42 0.000 intron (NM_001448, intron 2 of 8) intron (NM_001448, intron 2 of 8) 76615 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr11-6596 chr11 72801627 72801837 + 5.42 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -8027 NM_006645 10809 Hs.188606 NM_006645 ENSG00000214530 STARD10 CGI-52|NY-CO-28|PCTP2|SDCCAG28 StAR related lipid transfer domain containing 10 protein-coding chr12-8216 chr12 123657445 123657655 + 5.42 0.000 intron (NM_001271867, intron 8 of 11) L2a|LINE|L2 -13563 NM_001143850 79867 Hs.167165 NM_024809 ENSG00000168778 TCTN2 C12orf38|JBTS24|MKS8|TECT2 tectonic family member 2 protein-coding chr20-4205 chr20 46583344 46583554 + 5.42 0.000 intron (NM_001193340, intron 9 of 12) intron (NM_001193340, intron 9 of 12) -32795 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr20-3572 chr20 3460100 3460310 + 5.42 0.000 Intergenic Intergenic -10813 NM_001207047 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr22-4073 chr22 42662200 42662410 + 5.42 0.000 Intergenic CpG -12913 NM_000398 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr20-2937 chr20 4187951 4188161 + 5.42 0.000 TTS (NM_175839) TTS (NM_175839) -5034 NR_033917 728228 Hs.636379 NR_033917 ENSG00000230176 LINC01433 - long intergenic non-protein coding RNA 1433 ncRNA chr11-10592 chr11 123712529 123712739 + 5.42 0.000 Intergenic L1PA7|LINE|L1 18351 NM_001301819 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding chr19-5660 chr19 7287066 7287276 + 5.42 0.000 intron (NM_001079817, intron 1 of 20) AluSz|SINE|Alu 7243 NM_000208 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr8-5365 chr8 20958424 20958634 + 5.42 0.000 intron (NR_130773, intron 3 of 4) L1PA7|LINE|L1 4896 NR_130773 102467222 Hs.444226 NR_130773 ENSG00000253147 LOC102467222 - uncharacterized LOC102467222 ncRNA chr2-7816 chr2 46057904 46058114 + 5.42 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -239398 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr12-3813 chr12 68787340 68787550 + 5.42 0.000 Intergenic Intergenic 18049 NR_073494 100130075 Hs.744781 NR_073494 LOC100130075 - SUZ RNA binding domain containing 1 pseudogene pseudo chr15-4998 chr15 80723445 80723655 + 5.42 0.000 intron (NM_021214, intron 1 of 2) intron (NM_021214, intron 1 of 2) 28240 NM_021214 58489 Hs.459072 NM_021214 ENSG00000136379 ABHD17C FAM108C1 abhydrolase domain containing 17C protein-coding chr12-7665 chr12 84131448 84131658 + 5.42 0.000 Intergenic Intergenic 781246 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr1-11788 chr1 24161352 24161562 + 5.42 0.000 intron (NM_173065, intron 4 of 5) intron (NM_173065, intron 4 of 5) -18317 NM_021258 58985 Hs.110915 NM_021258 ENSG00000142677 IL22RA1 CRF2-9|IL22R|IL22R1 interleukin 22 receptor subunit alpha 1 protein-coding chr7-8698 chr7 74225649 74225859 + 5.42 0.000 intron (NM_032463, intron 13 of 13) intron (NM_032463, intron 13 of 13) 15748 NM_032463 7462 Hs.741249 NM_014146 ENSG00000086730 LAT2 HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 linker for activation of T cells family member 2 protein-coding chr3-6820 chr3 146665954 146666164 + 5.42 0.000 Intergenic L2|LINE|L2 -59843 NM_001085420 389158 Hs.254692 NM_001085420 ENSG00000231213 PLSCR5 - phospholipid scramblase family member 5 protein-coding chr4-3943 chr4 169087364 169087574 + 5.42 0.000 Intergenic Intergenic -77214 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr2-12001 chr2 28199931 28200141 + 5.42 0.000 intron (NR_120504, intron 1 of 2) intron (NR_120504, intron 1 of 2) 6925 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr17-5544 chr17 44043743 44043953 + 5.42 0.000 intron (NM_001369486, intron 1 of 3) intron (NM_001369486, intron 1 of 3) -20697 NM_001304813 84336 Hs.514211 NM_032376 ENSG00000091947 TMEM101 - transmembrane protein 101 protein-coding chr11-8067 chr11 30517821 30518031 + 5.42 0.000 intron (NM_001584, intron 2 of 5) intron (NM_001584, intron 2 of 5) 62567 NM_001584 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr2-5812 chr2 231617667 231617877 + 5.42 0.000 Intergenic Intergenic 24908 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chrX-3080 chrX 123824533 123824743 + 5.42 0.000 Intergenic Intergenic -35174 NM_001204401 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr14-4100 chr14 67964283 67964493 + 5.42 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 140796 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr12-4181 chr12 92692653 92692863 + 5.42 0.000 Intergenic L1MEg|LINE|L1 -10085 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000187510 C12orf74 - chromosome 12 open reading frame 74 protein-coding chr3-10410 chr3 130480799 130481009 + 5.42 0.000 intron (NR_022012, intron 41 of 41) LTR16A2|LTR|ERVL -79430 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr2-9953 chr2 1837620 1837830 + 5.42 0.000 intron (NM_015025, intron 21 of 24) intron (NM_015025, intron 21 of 24) -93210 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr5-4306 chr5 151167262 151167472 + 5.42 0.000 Intergenic Intergenic -9588 NM_001363114 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr4-4954 chr4 128678527 128678737 + 5.42 0.000 Intergenic AluSx|SINE|Alu -131068 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr14-4988 chr14 76110229 76110439 + 5.42 0.000 Intergenic Intergenic -41551 NM_001322029 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr11-7590 chr11 38388259 38388469 + 5.42 0.000 Intergenic LTR52-int|LTR|ERVL 257992 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA chr1-16058 chr1 201988720 201988930 + 5.42 0.000 intron (NM_001319182, intron 1 of 10) intron (NM_001319182, intron 1 of 10) 5464 NM_001319182 6051 Hs.497391 NM_020216 ENSG00000176393 RNPEP AP-B|APB arginyl aminopeptidase protein-coding chrX-4782 chrX 97687128 97687338 + 5.42 0.000 Intergenic Intergenic -122698 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr12-4526 chr12 25026453 25026663 + 5.42 0.000 intron (NM_001321724, intron 9 of 17) L2a|LINE|L2 -25670 NM_001366540 4033 Hs.124922 NM_006152 ENSG00000118308 LRMP JAW1 lymphoid restricted membrane protein protein-coding chr9-6638 chr9 132820538 132820748 + 5.42 0.000 intron (NM_001317959, intron 11 of 14) L1ME4a|LINE|L1 -57701 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr19-5375 chr19 8551288 8551498 + 5.42 0.000 intron (NM_012335, intron 8 of 27) AluSz|SINE|Alu 26049 NM_012335 4542 Hs.465818 NM_012335 ENSG00000142347 MYO1F - myosin IF protein-coding chr11-7582 chr11 34074953 34075163 + 5.42 0.000 intron (NM_005898, intron 4 of 18) AluYj4|SINE|Alu 23327 NM_203364 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr2-10747 chr2 36142860 36143070 + 5.42 0.000 Intergenic L1MEh|LINE|L1 212605 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr1-10713 chr1 193789194 193789404 + 5.42 0.000 Intergenic L3|LINE|CR1 484554 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr19-6604 chr19 28750915 28751125 + 5.42 0.000 Intergenic THE1A|LTR|ERVL-MaLR -23326 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr14-2682 chr14 76566660 76566870 + 5.42 0.000 Intergenic Intergenic -194703 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr12-3693 chr12 907350 907560 + 5.42 0.000 intron (NM_001184985, intron 26 of 27) intron (NM_001184985, intron 26 of 27) 25621 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr17-3791 chr17 39595684 39595894 + 5.42 0.000 Intergenic Intergenic 12131 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr10-8230 chr10 73763290 73763500 + 5.42 0.000 intron (NM_198597, intron 6 of 22) intron (NM_198597, intron 6 of 22) -8881 NM_173540 170384 Hs.588854 NM_173540 ENSG00000196968 FUT11 FUCTXI fucosyltransferase 11 protein-coding chr8-3261 chr8 3749619 3749829 + 5.42 0.000 intron (NM_033225, intron 6 of 69) L1ME3|LINE|L1 -1021273 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr4-7316 chr4 54976699 54976909 + 5.42 0.000 Intergenic L1MA2|LINE|L1 148791 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr13-2984 chr13 88866055 88866265 + 5.42 0.000 Intergenic L2b|LINE|L2 239307 NR_047490 100861553 Hs.560132 NR_047490 ENSG00000261666 LINC00560 - long intergenic non-protein coding RNA 560 ncRNA chr11-8694 chr11 5047282 5047492 + 5.42 0.000 TTS (NM_001001916) TTS (NM_001001916) 861 NM_001001916 119679 Hs.553558 NM_001001916 ENSG00000205495 OR52J3 OR11-32 olfactory receptor family 52 subfamily J member 3 protein-coding chrX-3199 chrX 46054559 46054769 + 5.42 0.000 Intergenic AluY|SINE|Alu -203174 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chr3-11178 chr3 192127655 192127865 + 5.42 0.000 Intergenic AluSx1|SINE|Alu -110870 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr2-7972 chr2 64393854 64394064 + 5.42 0.000 Intergenic Intergenic -53111 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr13-3594 chr13 28311015 28311225 + 5.42 0.000 intron (NM_002019, intron 27 of 29) AluJo|SINE|Alu -171946 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chrX-4019 chrX 17107168 17107378 + 5.42 0.000 intron (NM_001080975, intron 14 of 17) intron (NM_001080975, intron 14 of 17) 160615 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr12-8281 chr12 125640319 125640529 + 5.42 0.000 intron (NM_001286219, intron 1 of 4) intron (NM_001286219, intron 1 of 4) 17972 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr6-8007 chr6 117088481 117088691 + 5.42 0.000 Intergenic L1MD1|LINE|L1 -176972 NM_153453 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr2-13588 chr2 157263032 157263242 + 5.42 0.000 intron (NM_014568, intron 1 of 9) intron (NM_014568, intron 1 of 9) 5432 NM_001329868 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr11-7634 chr11 58756606 58756816 + 5.42 0.000 Intergenic Intergenic -24737 NM_005838 10249 Hs.145384 NM_005838 ENSG00000149124 GLYAT ACGNAT|CAT|GAT glycine-N-acyltransferase protein-coding chr4-8429 chr4 153684155 153684365 + 5.42 0.000 promoter-TSS (NM_001318796) promoter-TSS (NM_001318796) -20 NM_001318790 7097 Hs.519033 NM_003264 ENSG00000137462 TLR2 CD282|TIL4 toll like receptor 2 protein-coding chr19-6883 chr19 45116140 45116350 + 5.42 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 23066 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr7-7261 chr7 31061933 31062143 + 5.42 0.000 intron (NM_001199637, intron 1 of 13) L1ME3G|LINE|L1 9577 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr13-3676 chr13 34346943 34347153 + 5.42 0.000 promoter-TSS (NR_146542) promoter-TSS (NR_146542) -995 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr6-8389 chr6 150252116 150252326 + 5.42 0.000 Intergenic Intergenic 109177 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr10-6712 chr10 124852843 124853053 + 5.42 0.000 Intergenic L1ME3A|LINE|L1 51129 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr4-6429 chr4 133202544 133202754 + 5.42 0.000 Intergenic LTR53-int|LTR|ERVL 53355 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr10-7316 chr10 133175326 133175536 + 5.42 0.000 intron (NM_152643, intron 3 of 29) (ATGG)n|Simple_repeat|Simple_repeat 15212 NM_152643 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr2-7211 chr2 218019770 218019980 + 5.42 0.000 Intergenic Intergenic -15059 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr17-7926 chr17 44656392 44656602 + 5.42 0.000 promoter-TSS (NM_001145080) promoter-TSS (NM_001145080) 29 NM_001145080 284071 Hs.349758 NM_001033659 ENSG00000180336 MEIOC C17orf104 meiosis specific with coiled-coil domain protein-coding chr10-7604 chr10 20330681 20330891 + 5.42 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -221184 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr6-5490 chr6 163011635 163011845 + 5.42 0.000 intron (NM_001080379, intron 2 of 4) Tigger3|DNA|TcMar-Tigger 42421 NR_110872 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr17-4350 chr17 5540198 5540408 + 5.42 0.000 intron (NM_014922, intron 6 of 15) L1ME4b|LINE|L1 -39297 NM_001162371 728392 Hs.104305 NM_001162371 ENSG00000286190 LOC728392 - uncharacterized LOC728392 protein-coding chr1-14838 chr1 76069068 76069278 + 5.42 0.000 Intergenic MER58B|DNA|hAT-Charlie -5573 NM_001349105 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr12-5977 chr12 91617866 91618076 + 5.42 0.000 Intergenic Intergenic -435154 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr12-3306 chr12 79209532 79209742 + 5.42 0.000 intron (NM_005639, intron 3 of 10) LTR16|LTR|ERVL 163945 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chrX-4093 chrX 23614247 23614457 + 5.42 0.000 Intergenic L1MA4A|LINE|L1 -53141 NM_006406 10549 Hs.83383 NM_006406 ENSG00000123131 PRDX4 AOE37-2|AOE372|HEL-S-97n|PRX-4 peroxiredoxin 4 protein-coding chr2-11564 chr2 343203 343413 + 5.42 0.000 Intergenic A-rich|Low_complexity|Low_complexity 27024 NR_146953 105373350 NR_146953 LINC01865 - long intergenic non-protein coding RNA 1865 ncRNA chr5-4670 chr5 37821066 37821276 + 5.42 0.000 intron (NM_199231, intron 2 of 2) intron (NM_199231, intron 2 of 2) 13651 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr2-8401 chr2 115017003 115017213 + 5.42 0.000 intron (NM_001321910, intron 2 of 26) L1PA3|LINE|L1 -47465 NM_001178037 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chrX-2992 chrX 43730318 43730528 + 5.42 0.000 intron (NM_001270458, intron 7 of 15) intron (NM_001270458, intron 7 of 15) 75516 NM_001270458 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr16-6867 chr16 84020058 84020268 + 5.42 0.000 intron (NM_001080442, intron 6 of 9) AluJr|SINE|Alu 21994 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr9-6555 chr9 119152065 119152275 + 5.42 0.000 Intergenic MER77|LTR|ERVL 217265 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr20-4298 chr20 50886894 50887104 + 5.42 0.000 Intergenic AluSq2|SINE|Alu 22792 NM_001282532 23394 Hs.293736 NM_015339 ENSG00000101126 ADNP ADNP1|HVDAS|MRD28 activity dependent neuroprotector homeobox protein-coding chr9-8208 chr9 108922828 108923038 + 5.42 0.000 intron (NM_001330749, intron 5 of 34) intron (NM_001330749, intron 5 of 34) 11191 NM_001330749 8518 Hs.494738 NM_003640 ENSG00000070061 ELP1 DYS|FD|IKAP|IKBKAP|IKI3|TOT1 elongator complex protein 1 protein-coding chr1-10707 chr1 192654711 192654921 + 5.42 0.000 intron (NM_144766, intron 4 of 5) intron (NM_144766, intron 4 of 5) 18669 NM_144766 6003 Hs.497220 NM_002927 ENSG00000127074 RGS13 - regulator of G protein signaling 13 protein-coding chr3-10993 chr3 179189925 179190135 + 5.42 0.000 intron (NM_006218, intron 1 of 20) intron (NM_006218, intron 1 of 20) 41673 NM_006218 5290 Hs.553498 NM_006218 ENSG00000121879 PIK3CA CLAPO|CLOVE|CWS5|MCAP|MCM|MCMTC|PI3K|PI3K-alpha|p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha protein-coding chr10-7951 chr10 54117804 54118014 + 5.42 0.000 intron (NM_001354411, intron 16 of 34) MER52A|LTR|ERV1 -368321 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr16-5685 chr16 73333543 73333753 + 5.42 0.000 Intergenic Intergenic -53157 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr2-12497 chr2 63103915 63104125 + 5.42 0.000 Intergenic L1MA4A|LINE|L1 15522 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr12-8213 chr12 123621838 123622048 + 5.42 0.000 TTS (NR_135105) TTS (NR_135105) 5233 NR_145743 109616977 NR_145743 ENSG00000206897 SNORA9B - small nucleolar RNA, H/ACA box 9B snoRNA chr15-2884 chr15 42123836 42124046 + 5.42 0.000 Intergenic L1MC1|LINE|L1 -29379 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr3-10415 chr3 130652394 130652604 + 5.42 0.000 intron (NM_001102608, intron 32 of 35) L2a|LINE|L2 92165 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen type VI alpha 6 chain protein-coding chr11-8372 chr11 85309657 85309867 + 5.42 0.000 intron (NM_001142699, intron 3 of 27) L2a|LINE|L2 317508 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr2-10648 chr2 17499038 17499248 + 5.42 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 19297 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding chr10-4901 chr10 20921041 20921251 + 5.42 0.000 intron (NM_001173484, intron 4 of 6) intron (NM_001173484, intron 4 of 6) -23544 NM_006393 10529 Hs.5025 NM_006393 ENSG00000078114 NEBL LASP2|LNEBL nebulette protein-coding chr7-7476 chr7 97681940 97682150 + 5.42 0.000 Intergenic MER21-int|LTR|ERVL -50041 NM_013997 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding chr16-6007 chr16 8567600 8567810 + 5.42 0.000 intron (NR_110736, intron 2 of 3) intron (NR_110736, intron 2 of 3) 22133 NM_001290095 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr14-4886 chr14 72067880 72068090 + 5.42 0.000 intron (NM_001370288, intron 2 of 16) MER5A1|DNA|hAT-Charlie 134458 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr6-6553 chr6 133673600 133673810 + 5.42 0.000 intron (NR_109982, intron 4 of 8) intron (NR_109982, intron 4 of 8) -147442 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr1-13574 chr1 8151049 8151259 + 5.42 0.000 Intergenic AluSz|SINE|Alu -57518 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr3-10397 chr3 129569491 129569701 + 5.42 0.000 intron (NM_015103, intron 20 of 35) intron (NM_015103, intron 20 of 35) 21211 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr11-7507 chr11 5577395 5577605 + 5.42 0.000 Intergenic (GA)n|Simple_repeat|Simple_repeat -3377 NM_001005162 340980 Hs.553704 NM_001005162 ENSG00000187747 OR52B6 OR11-47 olfactory receptor family 52 subfamily B member 6 protein-coding chr22-2228 chr22 23290485 23290695 + 5.42 0.000 intron (NM_004327, intron 14 of 22) intron (NM_004327, intron 14 of 22) 27823 NR_033408 26226 Hs.729589 NR_033408 ENSG00000230701 FBXW4P1 FBW3|FBXW3|SHFM3P1 F-box and WD repeat domain containing 4 pseudogene 1 pseudo chr19-4791 chr19 34088363 34088573 + 5.42 0.000 Intergenic Intergenic -84036 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr16-4545 chr16 65108021 65108231 + 5.42 0.000 intron (NM_001330576, intron 1 of 11) intron (NM_001330576, intron 1 of 11) 13937 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-9988 chr1 83213741 83213951 + 5.42 0.000 Intergenic Intergenic -227638 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chr12-6321 chr12 53935909 53936119 + 5.42 0.000 non-coding (NR_047507, exon 3 of 3) non-coding (NR_047507, exon 3 of 3) -2817 NM_017410 3229 Hs.118608 NM_017410 ENSG00000123364 HOXC13 ECTD9|HOX3|HOX3G homeobox C13 protein-coding chr9-5434 chr9 97072400 97072610 + 5.42 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 9440 NR_002942 340508 Hs.680438 NR_002942 ENSG00000228376 GAS2L1P2 - growth arrest specific 2 like 1 pseudogene 2 pseudo chr7-6117 chr7 121560934 121561144 + 5.42 0.000 Intergenic L1MEc|LINE|L1 -164671 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr1-15776 chr1 175077605 175077815 + 5.42 0.000 exon (NM_022093, exon 2 of 19) exon (NM_022093, exon 2 of 19) 9877 NM_022093 63923 Hs.156369 NM_022093 ENSG00000120332 TNN TN-W tenascin N protein-coding chr5-6567 chr5 17144608 17144818 + 5.42 0.000 intron (NR_027253, intron 2 of 2) L1P3|LINE|L1 11279 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr8-5205 chr8 112297873 112298083 + 5.42 0.000 intron (NM_001363185, intron 49 of 66) L1ME2z|LINE|L1 -345515 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr8-1853 chr8 545504 545714 + 5.42 0.000 promoter-TSS (NM_001256113) promoter-TSS (NM_001256113) 172 NM_175075 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr19-6554 chr19 19182068 19182278 + 5.42 0.000 3' UTR (NM_001145783, exon 4 of 4) 3' UTR (NM_001145783, exon 4 of 4) 9979 NM_005919 4207 Hs.153629 NM_005919 ENSG00000064489 BORCS8-MEF2B LOC729991-MEF2B|MEF2B|MEF2BNB-MEF2B|RSRFR2 BORCS8-MEF2B readthrough protein-coding chr2-10917 chr2 73018820 73019030 + 5.42 0.000 intron (NR_138476, intron 6 of 14) L1ME3|LINE|L1 40247 NM_001330411 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding GL000194.1-6 GL000194.1 81374 81584 + 5.42 0.000 NA NA NA NA chr8-2494 chr8 144594070 144594280 + 5.42 0.000 intron (NM_025251, intron 1 of 10) L1MB8|LINE|L1 11520 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chrX-4140 chrX 28311925 28312135 + 5.42 0.000 Intergenic MER50|LTR|ERV1 183633 NR_106750 102465140 NR_106750 ENSG00000277569 MIR6134 hsa-mir-6134 microRNA 6134 ncRNA chr10-8857 chr10 111426159 111426369 + 5.42 0.000 Intergenic AluSx1|SINE|Alu 311973 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr12-6897 chr12 22942659 22942869 + 5.42 0.000 Intergenic L1M3a|LINE|L1 -232872 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr12-2090 chr12 31366124 31366334 + 5.42 0.000 intron (NR_146469, intron 1 of 1) intron (NR_146469, intron 1 of 1) 3072 NR_146469 101929027 Hs.266041 NR_146469 ENSG00000256232 LINC02387 - long intergenic non-protein coding RNA 2387 ncRNA chr5-7695 chr5 56460757 56460967 + 5.42 0.000 intron (NR_104664, intron 4 of 4) intron (NR_104664, intron 4 of 4) 20907 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr1-10105 chr1 98943178 98943388 + 5.42 0.000 intron (NM_001037317, intron 3 of 5) ERV3-16A3_I-int|LTR|ERVL -60993 NR_033940 100129620 Hs.588631 NR_033940 ENSG00000232825 LOC100129620 - uncharacterized LOC100129620 ncRNA chr3-5689 chr3 13773963 13774173 + 5.42 0.000 Intergenic Intergenic 106003 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding KI270747.1-1 KI270747.1 3653 3863 + 5.42 0.000 NA NA NA NA chr16-4721 chr16 83457499 83457709 + 5.42 0.000 intron (NM_001220489, intron 5 of 12) intron (NM_001220489, intron 5 of 12) -50742 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr11-8153 chr11 59770644 59770854 + 5.42 0.000 intron (NM_001178040, intron 1 of 9) intron (NM_001178040, intron 1 of 9) 15373 NM_001178040 6809 Hs.180711 NM_004177 ENSG00000166900 STX3 STX3A syntaxin 3 protein-coding chr11-10271 chr11 102971303 102971513 + 5.42 0.000 Intergenic Intergenic -15676 NM_002427 4322 Hs.2936 NM_002427 ENSG00000137745 MMP13 CLG3|MANDP1|MDST|MMP-13 matrix metallopeptidase 13 protein-coding chr12-7670 chr12 84819123 84819333 + 5.42 0.000 Intergenic L1MA5A|LINE|L1 93571 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr9-6491 chr9 97052263 97052473 + 5.42 0.000 Intergenic AluJb|SINE|Alu -12725 NM_001201575 1515 Hs.610096 NM_001333 ENSG00000136943 CTSV CATL2|CTSL2|CTSU cathepsin V protein-coding chr3-10794 chr3 159837382 159837592 + 5.42 0.000 intron (NM_001197113, intron 5 of 10) AluSx|SINE|Alu -2374 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr1-8968 chr1 9525093 9525303 + 5.42 0.000 Intergenic MLT2B1|LTR|ERVL -14267 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr22-2483 chr22 21720962 21721172 + 5.42 0.000 intron (NM_013313, intron 1 of 4) AluSz|SINE|Alu 14727 NM_013313 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chrX-1168 chrX 47609025 47609235 + 5.42 0.000 intron (NM_006950, intron 1 of 12) intron (NM_006950, intron 1 of 12) 10727 NM_006950 6853 Hs.225936 NM_006950 ENSG00000008056 SYN1 SYN1a|SYN1b|SYNI synapsin I protein-coding chr5-8106 chr5 97456254 97456464 + 5.42 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -48337 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr14-5153 chr14 91091687 91091897 + 5.42 0.000 intron (NM_001358312, intron 1 of 13) intron (NM_001358312, intron 1 of 13) -22221 NM_001102368 80017 Hs.309849 NM_024952 ENSG00000133943 DGLUCY C14orf159 D-glutamate cyclase protein-coding chr13-2893 chr13 112907412 112907622 + 5.42 0.000 Intergenic Intergenic 61121 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr8-7197 chr8 124949512 124949722 + 5.42 0.000 intron (NR_027321, intron 3 of 3) MLT2A2|LTR|ERVL 7609 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA chr7-3823 chr7 98274012 98274222 + 5.42 0.000 Intergenic MIRc|SINE|MIR -7569 NM_015379 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chrX-3546 chrX 58085223 58085433 + 5.42 0.000 Intergenic HSAT4|Satellite|centr -174695 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr5-8706 chr5 142495884 142496094 + 5.42 0.000 Intergenic Intergenic 125345 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr16-6889 chr16 84572330 84572540 + 5.42 0.000 intron (NM_021149, intron 3 of 3) intron (NM_021149, intron 3 of 3) 45643 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr20-4341 chr20 54096871 54097081 + 5.42 0.000 Intergenic Intergenic -26211 NM_001316361 8537 Hs.400556 NM_003657 ENSG00000064787 BCAS1 AIBC1|NABC1 breast carcinoma amplified sequence 1 protein-coding chr9-7904 chr9 88733873 88734083 + 5.42 0.000 Intergenic Intergenic 11927 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr2-14324 chr2 217870733 217870943 + 5.42 0.000 intron (NM_001308023, intron 15 of 29) MamSINE1|SINE|tRNA-RTE 29790 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr4-5989 chr4 184803961 184804171 + 5.42 0.000 intron (NM_001995, intron 1 of 20) intron (NM_001995, intron 1 of 20) 1722 NM_001286710 2180 Hs.406678 NM_001995 ENSG00000151726 ACSL1 ACS1|FACL1|FACL2|LACS|LACS1|LACS2 acyl-CoA synthetase long chain family member 1 protein-coding chr8-2681 chr8 90073430 90073640 + 5.42 0.000 intron (NM_001366795, intron 2 of 9) LTR16A|LTR|ERVL 9344 NM_004929 793 Hs.65425 NM_004929 ENSG00000104327 CALB1 CALB|D-28K calbindin 1 protein-coding chr11-10302 chr11 107208287 107208497 + 5.42 0.000 Intergenic Intergenic -189916 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr4-5610 chr4 2195426 2195636 + 5.42 0.000 intron (NM_181808, intron 6 of 25) AluJr|SINE|Alu 46590 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr13-3710 chr13 38900157 38900367 + 5.42 0.000 Intergenic Intergenic -72671 NR_146963 100874073 Hs.253994 NR_146963 FREM2-AS1 - FREM2 antisense RNA 1 ncRNA chr8-4180 chr8 80702573 80702783 + 5.42 0.000 intron (NM_001033723, intron 2 of 8) L2|LINE|L2 171790 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr1-14426 chr1 45112730 45112940 + 5.42 0.000 intron (NM_020883, intron 1 of 13) LTR87|LTR|ERVL? 93770 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr20-3901 chr20 31984613 31984823 + 5.42 0.000 intron (NM_001011718, intron 1 of 2) intron (NM_001011718, intron 1 of 2) 16567 NM_001011718 343702 Hs.666444 NM_001011718 ENSG00000260903 XKR7 C20orf159|dJ310O13.4 XK related 7 protein-coding chr17-6702 chr17 79059870 79060080 + 5.42 0.000 Intergenic AluSx|SINE|Alu -14962 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr18-2668 chr18 52571072 52571282 + 5.42 0.000 intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 230980 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr14-3903 chr14 99440959 99441169 + 5.42 0.000 intron (NM_199123, intron 6 of 8) intron (NM_199123, intron 6 of 8) 39795 NM_032233 84193 Hs.510407 NM_032233 ENSG00000183576 SETD3 C14orf154|hSETD3 SET domain containing 3, actin histidine methyltransferase protein-coding chr10-4207 chr10 112234698 112234908 + 5.42 0.000 Intergenic AluSz6|SINE|Alu -48597 NM_058222 6975 Hs.345485 NM_058222 ENSG00000119913 TECTB - tectorin beta protein-coding chr2-12718 chr2 80033313 80033523 + 5.42 0.000 intron (NM_001282598, intron 7 of 17) AluJb|SINE|Alu -166835 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr5-4731 chr5 43870804 43871014 + 5.42 0.000 Intergenic Intergenic -267679 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chrX-4481 chrX 63785019 63785229 + 5.42 0.000 promoter-TSS (NM_001369043) promoter-TSS (NM_001369043) 90 NM_001353922 23229 Hs.54697 NM_015185 ENSG00000131089 ARHGEF9 COLLYBISTIN|EIEE8|HPEM-2|PEM-2|PEM2 Cdc42 guanine nucleotide exchange factor 9 protein-coding chr11-7137 chr11 125941951 125942161 + 5.42 0.000 Intergenic Intergenic -4000 NM_001365077 338667 Hs.730137 NM_001365077 VSIG10L2 - V-set and immunoglobulin domain containing 10 like 2 protein-coding chr3-7343 chr3 48165061 48165271 + 5.42 0.000 intron (NM_201567, intron 11 of 13) intron (NM_201567, intron 11 of 13) 23251 NM_201567 993 Hs.437705 NM_001789 ENSG00000164045 CDC25A CDC25A2 cell division cycle 25A protein-coding chr11-9645 chr11 66651886 66652096 + 5.42 0.000 intron (NM_001198844, intron 2 of 2) intron (NM_001198844, intron 2 of 2) 13288 NM_001198844 5936 Hs.523822 NM_002896 ENSG00000173933 RBM4 LARK|RBM4A|ZCCHC21|ZCRB3A RNA binding motif protein 4 protein-coding chr4-6579 chr4 175048 175258 + 5.42 0.000 intron (NR_110527, intron 3 of 4) HERV4_I-int|LTR|ERV1 -37447 NR_027481 642280 Hs.673877 NM_001039758 ENSG00000198155 ZNF876P - zinc finger protein 876, pseudogene pseudo chr7-6249 chr7 134563150 134563360 + 5.42 0.000 intron (NM_001080538, intron 2 of 11) intron (NM_001080538, intron 2 of 11) 14145 NR_160302 441282 Hs.729418 NM_001080538 ENSG00000227471 AKR1B15 AKR1B10L|AKR1B10L, AK1R1B7|AKR1R1B7 aldo-keto reductase family 1 member B15 protein-coding chr5-6026 chr5 159383468 159383678 + 5.42 0.000 Intergenic L1PB2|LINE|L1 52055 NR_037889 285626 Hs.449275 NR_037889 ENSG00000249738 LOC285626 - uncharacterized LOC285626 ncRNA chr17-7019 chr17 55352992 55353202 + 5.42 0.000 Intergenic L1M4|LINE|L1 68738 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr4-8712 chr4 183075606 183075816 + 5.42 0.000 Intergenic Intergenic 23488 NR_024008 152641 Hs.745108 NM_153008 ENSG00000251359 WWC2-AS2 C4orf38 WWC2 antisense RNA 2 ncRNA chr6-4252 chr6 7878175 7878385 + 5.42 0.000 intron (NM_001718, intron 4 of 6) intron (NM_001718, intron 4 of 6) 31797 NM_001145549 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr4-8397 chr4 151652877 151653087 + 5.42 0.000 intron (NM_001109977, intron 11 of 13) L2b|LINE|L2 108025 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr16-4670 chr16 77496388 77496598 + 5.42 0.000 Intergenic Intergenic -61459 NM_001326358 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr2-10714 chr2 28485233 28485443 + 5.42 0.000 Intergenic Intergenic -10722 NM_153021 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr1-16190 chr1 207269381 207269591 + 5.42 0.000 Intergenic L1PREC2|LINE|L1 -52192 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr2-11086 chr2 125477262 125477472 + 5.42 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 640618 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr6-5971 chr6 85166387 85166597 + 5.42 0.000 Intergenic Intergenic 223694 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr14-4816 chr14 68146903 68147113 + 5.42 0.000 intron (NM_133509, intron 7 of 10) L4_C_Mam|LINE|RTE-X 323416 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr10-7992 chr10 60549691 60549901 + 5.42 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 23160 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr10-7089 chr10 92955393 92955603 + 5.42 0.000 intron (NM_001319195, intron 16 of 21) intron (NM_001319195, intron 16 of 21) -105300 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr1-14650 chr1 58227578 58227788 + 5.42 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 22820 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr6-5994 chr6 98834434 98834644 + 5.42 0.000 promoter-TSS (NM_005604) promoter-TSS (NM_005604) -35 NM_005604 5454 Hs.182505 NM_005604 ENSG00000184486 POU3F2 BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7 POU class 3 homeobox 2 protein-coding chr8-5595 chr8 93242210 93242420 + 5.42 0.000 Intergenic MER52A|LTR|ERV1 -75465 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr10-6551 chr10 72564932 72565142 + 5.42 0.000 intron (NM_006077, intron 2 of 11) AluSz|SINE|Alu -41051 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr10-7227 chr10 119919217 119919427 + 5.42 0.000 intron (NM_007190, intron 10 of 18) intron (NM_007190, intron 10 of 18) 26592 NR_037771 11196 Hs.435004 NM_007190 ENSG00000107651 SEC23IP MSTP053|P125|P125A SEC23 interacting protein protein-coding chr1-9368 chr1 29824457 29824667 + 5.42 0.000 Intergenic MIRb|SINE|MIR 213050 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr10-6725 chr10 126689280 126689490 + 5.42 0.000 Intergenic Intergenic -18875 NM_001350923 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr13-3290 chr13 47271058 47271268 + 5.42 0.000 Intergenic L1MA8|LINE|L1 -374087 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr9-5255 chr9 79134410 79134620 + 5.42 0.000 TTS (NR_109771) TTS (NR_109771) 11151 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr2-12941 chr2 102235807 102236017 + 5.42 0.000 intron (NM_001351447, intron 9 of 9) intron (NM_001351447, intron 9 of 9) 48598 NM_001351446 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding chr1-9197 chr1 21851870 21852080 + 5.42 0.000 intron (NM_005529, intron 53 of 96) intron (NM_005529, intron 53 of 96) 39710 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr17-8063 chr17 51390775 51390985 + 5.42 0.000 Intergenic Intergenic -44547 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr11-5079 chr11 114036139 114036349 + 5.42 0.000 Intergenic CpG -23467 NM_006006 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr2-4398 chr2 71716960 71717170 + 5.42 0.000 Intergenic Intergenic 250366 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr12-6378 chr12 66365848 66366058 + 5.42 0.000 intron (NM_001366722, intron 23 of 24) MIRb|SINE|MIR 63408 NR_135080 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr19-5682 chr19 10417575 10417785 + 5.42 0.000 exon (NM_001243121, exon 3 of 17) exon (NM_001243121, exon 3 of 17) 907 NM_001243121 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr8-6506 chr8 65545037 65545247 + 5.42 0.000 intron (NR_033893, intron 1 of 4) L2a|LINE|L2 17524 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr15-4396 chr15 43257128 43257338 + 5.42 0.000 intron (NM_004245, intron 2 of 11) L1M5|LINE|L1 9695 NM_201631 9333 Hs.129719 NM_004245 ENSG00000104055 TGM5 PSS2|TGASE5|TGASEX|TGM6|TGMX|TGX transglutaminase 5 protein-coding chr3-9183 chr3 34687464 34687674 + 5.42 0.000 Intergenic MER63A|DNA|hAT-Blackjack 706454 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr8-7284 chr8 131013578 131013788 + 5.42 0.000 intron (NM_001115, intron 1 of 17) intron (NM_001115, intron 1 of 17) 27226 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chrX-1662 chrX 150361865 150362075 + 5.42 0.000 Intergenic CpG -1347 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr4-7577 chr4 79472257 79472467 + 5.42 0.000 Intergenic Intergenic -20231 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr9-6513 chr9 105656132 105656342 + 5.42 0.000 Intergenic (GGC)n|Simple_repeat|Simple_repeat -6220 NM_005421 6887 Hs.247978 NM_005421 ENSG00000186051 TAL2 - TAL bHLH transcription factor 2 protein-coding chr2-11729 chr2 10559259 10559469 + 5.42 0.000 Intergenic Intergenic 109636 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr7-7731 chr7 740398 740608 + 5.42 0.000 intron (NR_075098, intron 2 of 12) intron (NR_075098, intron 2 of 12) -12827 NM_001164758 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr20-1353 chr20 31861473 31861683 + 5.42 0.000 exon (NM_080611, exon 7 of 7) exon (NM_080611, exon 7 of 7) 8653 NM_177991 128853 Hs.434108 NM_080611 ENSG00000149599 DUSP15 C20orf57|VHY dual specificity phosphatase 15 protein-coding chr8-6741 chr8 88635128 88635338 + 5.42 0.000 Intergenic AluJr4|SINE|Alu -307750 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr8-6614 chr8 75127015 75127225 + 5.42 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 126965 NM_001286778 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr11-10300 chr11 106826683 106826893 + 5.42 0.000 intron (NM_001256424, intron 4 of 8) intron (NM_001256424, intron 4 of 8) 191688 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr12-6613 chr12 130216316 130216526 + 5.42 0.000 Intergenic L2b|LINE|L2 53962 NM_007197 11211 Hs.31664 NM_007197 ENSG00000111432 FZD10 CD350|FZ-10|Fz10|FzE7|hFz10 frizzled class receptor 10 protein-coding chr11-9471 chr11 61857479 61857689 + 5.42 0.000 intron (NM_001281502, intron 7 of 11) intron (NM_001281502, intron 7 of 11) 20694 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr9-7454 chr9 26933734 26933944 + 5.42 0.000 intron (NM_001321546, intron 2 of 12) AluJr|SINE|Alu -13151 NM_001099223 80173 Hs.145402 NM_025103 ENSG00000096872 IFT74 BBS20|CCDC2|CMG-1|CMG1 intraflagellar transport 74 protein-coding chr9-5406 chr9 94600184 94600394 + 5.42 0.000 Intergenic Intergenic -6465 NM_003837 8789 Hs.61255 NM_003837 ENSG00000130957 FBP2 - fructose-bisphosphatase 2 protein-coding chr2-6963 chr2 122310396 122310606 + 5.42 0.000 Intergenic Intergenic 554850 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr11-10389 chr11 113382773 113382983 + 5.42 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -4901 NM_178510 255239 Hs.448473 NM_178510 ENSG00000170209 ANKK1 PKK2|sgK288 ankyrin repeat and kinase domain containing 1 protein-coding chr18-3118 chr18 37274315 37274525 + 5.42 0.000 promoter-TSS (NR_134588) promoter-TSS (NR_134588) -40 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr7-5852 chr7 88921819 88922029 + 5.42 0.000 intron (NM_181646, intron 1 of 3) intron (NM_181646, intron 1 of 3) -126187 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr5-7990 chr5 84742628 84742838 + 5.42 0.000 Intergenic L1PB3|LINE|L1 -357853 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chrX-3628 chrX 89088191 89088401 + 5.42 0.000 Intergenic HERVL-int|LTR|ERVL 341071 NM_001184771 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr8-6465 chr8 61760681 61760891 + 5.42 0.000 Intergenic Intergenic 45998 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr8-6750 chr8 90390287 90390497 + 5.42 0.000 Intergenic L1PA7|LINE|L1 168904 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr14-2597 chr14 53260803 53261013 + 5.42 0.000 Intergenic MER4-int|LTR|ERV1 107554 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr17-8349 chr17 73840032 73840242 + 5.42 0.000 Intergenic Intergenic -11600 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr10-5517 chr10 84058659 84058869 + 5.42 0.000 Intergenic L2a|LINE|L2 -80745 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr4-5122 chr4 151111742 151111952 + 5.42 0.000 Intergenic HERVL40-int|LTR|ERVL 8020 NR_000007 8944 NR_000007 ENSG00000208797 SNORD73A RNU73|RNU73A|U73|U73a small nucleolar RNA, C/D box 73A snoRNA chr2-12209 chr2 42736186 42736396 + 5.42 0.000 intron (NM_001330443, intron 16 of 16) L1MA3|LINE|L1 27970 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr9-7713 chr9 73016670 73016880 + 5.42 0.000 Intergenic Intergenic -63722 NM_000689 216 Hs.76392 NM_000689 ENSG00000165092 ALDH1A1 ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 aldehyde dehydrogenase 1 family member A1 protein-coding chr11-4063 chr11 17694815 17695025 + 5.42 0.000 TTS (NR_132279) TTS (NR_132279) 2019 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr1-15951 chr1 190512928 190513138 + 5.42 0.000 Intergenic AluY|SINE|Alu 34482 NR_110717 101929120 Hs.602301 NR_110716 LINC01351 - long intergenic non-protein coding RNA 1351 ncRNA chr9-6336 chr9 5931047 5931257 + 5.42 0.000 intron (NM_001017969, intron 5 of 7) intron (NM_001017969, intron 5 of 7) 40263 NM_005511 2315 Hs.154069 NM_005511 ENSG00000120215 MLANA MART-1|MART1 melan-A protein-coding chr6-5642 chr6 73619812 73620022 + 5.42 0.000 intron (NM_012434, intron 7 of 10) intron (NM_012434, intron 7 of 10) 34075 NM_012434 26503 Hs.597422 NM_012434 ENSG00000119899 SLC17A5 AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 member 5 protein-coding chr17-7945 chr17 45307493 45307703 + 5.42 0.000 intron (NM_003954, intron 1 of 15) intron (NM_003954, intron 1 of 15) 9422 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding chr11-9759 chr11 69161934 69162144 + 5.42 0.000 non-coding (NR_161183, exon 2 of 2) non-coding (NR_161183, exon 2 of 2) 6104 NR_161183 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chr16-5709 chr16 81481452 81481662 + 5.42 0.000 intron (NM_198390, intron 1 of 20) intron (NM_198390, intron 1 of 20) -13797 NM_030629 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding chr9-3809 chr9 128663723 128663933 + 5.42 0.000 Intergenic AluJb|SINE|Alu -6978 NM_052844 89891 Hs.495240 NM_052844 ENSG00000119333 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding chr19-4623 chr19 14326000 14326210 + 5.42 0.000 intron (NR_134908, intron 1 of 3) intron (NR_134908, intron 1 of 3) -7638 NR_134916 101928845 Hs.531617 NR_134916 ENSG00000267147 LINC01842 - long intergenic non-protein coding RNA 1842 ncRNA chr8-4235 chr8 88896647 88896857 + 5.42 0.000 Intergenic L1MA1|LINE|L1 -569269 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr5-7285 chr5 14252505 14252715 + 5.42 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 109268 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr2-7857 chr2 49785393 49785603 + 5.42 0.000 Intergenic LTR32|LTR|ERVL 188705 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr1-13917 chr1 22424426 22424636 + 5.42 0.000 Intergenic THE1B|LTR|ERVL-MaLR -27320 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr2-13818 chr2 175361748 175361958 + 5.42 0.000 Intergenic Intergenic -180143 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr5-7527 chr5 37325971 37326181 + 5.42 0.000 intron (NM_001278312, intron 18 of 33) intron (NM_001278312, intron 18 of 33) 45030 NM_001278312 9631 Hs.547696 NM_004298 ENSG00000113569 NUP155 ATFB15|N155 nucleoporin 155 protein-coding chrX-4147 chrX 30150325 30150535 + 5.42 0.000 Intergenic MER52A|LTR|ERV1 -65133 NM_002364 4113 Hs.113824 NM_002364 ENSG00000099399 MAGEB2 CT3.2|DAM6|MAGE-XP-2 MAGE family member B2 protein-coding chr3-6460 chr3 106926820 106927030 + 5.42 0.000 Intergenic HERVH-int|LTR|ERV1 313713 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr14-2814 chr14 22973714 22973924 + 5.42 0.000 intron (NM_198086, intron 5 of 5) intron (NM_198086, intron 5 of 5) 3023 NM_198086 84962 Hs.655832 NM_032876 ENSG00000129474 AJUBA JUB ajuba LIM protein protein-coding chr2-10057 chr2 38237453 38237663 + 5.42 0.000 Intergenic LTR22B1|LTR|ERVK 106453 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr15-4928 chr15 77882143 77882353 + 5.42 0.000 Intergenic Intergenic 44598 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr20-3414 chr20 41912207 41912417 + 5.42 0.000 Intergenic L1ME3B|LINE|L1 -293935 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr13-1833 chr13 81111021 81111231 + 5.42 0.000 Intergenic MER76|LTR|ERVL 92735 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA chr10-7943 chr10 53309286 53309496 + 5.42 0.000 Intergenic Intergenic -537691 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr12-6322 chr12 54099011 54099221 + 5.42 0.000 intron (NR_026655, intron 1 of 1) MIRc|SINE|MIR -3093 NR_026657 100240734 Hs.634954 NR_026657 LOC100240734 - uncharacterized LOC100240734 ncRNA chr16-5758 chr16 86863266 86863476 + 5.42 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 141280 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr18-3426 chr18 63887328 63887538 + 5.42 0.000 promoter-TSS (NM_001143818) promoter-TSS (NM_001143818) -272 NM_001143818 5055 Hs.594481 NM_002575 ENSG00000197632 SERPINB2 HsT1201|PAI|PAI-2|PAI2|PLANH2 serpin family B member 2 protein-coding chrX-4300 chrX 43517676 43517886 + 5.42 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -137126 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr2-13764 chr2 170815826 170816036 + 5.42 0.000 promoter-TSS (NM_000817) promoter-TSS (NM_000817) -759 NM_013445 2571 Hs.420036 NM_000817 ENSG00000128683 GAD1 CPSQ1|GAD|SCP glutamate decarboxylase 1 protein-coding chr3-9886 chr3 82445646 82445856 + 5.42 0.000 intron (NR_147146, intron 4 of 8) L1MC1|LINE|L1 459609 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr14-5097 chr14 87496111 87496321 + 5.42 0.000 Intergenic Intergenic 159078 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr12-5488 chr12 125192371 125192581 + 5.42 0.000 intron (NM_001366854, intron 1 of 8) intron (NM_001366854, intron 1 of 8) 6090 NM_001366854 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr15-4130 chr15 81588886 81589096 + 5.42 0.000 Intergenic L1ME4a|LINE|L1 -214778 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr4-5671 chr4 18213533 18213743 + 5.42 0.000 Intergenic L1PA15|LINE|L1 -191763 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr10-6205 chr10 34171944 34172154 + 5.42 0.000 intron (NM_001184789, intron 20 of 22) intron (NM_001184789, intron 20 of 22) -399369 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr10-9125 chr10 127472944 127473154 + 5.42 0.000 Intergenic MLT2F|LTR|ERVL -76300 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr18-3380 chr18 59282764 59282974 + 5.42 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -9415 NM_013435 30062 Hs.278957 NM_013435 ENSG00000134438 RAX MCOP3|RX retina and anterior neural fold homeobox protein-coding chr4-7368 chr4 60216057 60216267 + 5.42 0.000 Intergenic Intergenic -706457 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr17-7982 chr17 48638261 48638471 + 5.42 0.000 Intergenic Intergenic -5807 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr7-3202 chr7 128531806 128532016 + 5.42 0.000 Intergenic CpG 55182 NM_018396 55798 Hs.433213 NM_018396 ENSG00000165055 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding chr20-2326 chr20 9692201 9692411 + 5.42 0.000 intron (NM_020341, intron 3 of 10) intron (NM_020341, intron 3 of 10) 146770 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr10-8863 chr10 112055980 112056190 + 5.42 0.000 Intergenic Intergenic 127680 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr3-9669 chr3 62510673 62510883 + 5.42 0.000 intron (NM_183393, intron 16 of 26) intron (NM_183393, intron 16 of 26) -137228 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chrX-4636 chrX 78326714 78326924 + 5.42 0.000 intron (NM_001282188, intron 1 of 3) MIRc|SINE|MIR 792 NM_001282187 10800 Hs.733809 NM_006639 ENSG00000173198 CYSLTR1 CYSLT1|CYSLT1R|CYSLTR|HMTMF81 cysteinyl leukotriene receptor 1 protein-coding chr11-6987 chr11 116568886 116569096 + 5.42 0.000 Intergenic Intergenic -70431 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr11-9770 chr11 69430731 69430941 + 5.42 0.000 Intergenic L1M5|LINE|L1 5181 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr6-6446 chr6 100426754 100426964 + 5.42 0.000 intron (NM_005068, intron 8 of 10) intron (NM_005068, intron 8 of 10) 36816 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 SIM bHLH transcription factor 1 protein-coding chr1-12980 chr1 155379198 155379408 + 5.42 0.000 intron (NM_018489, intron 8 of 27) intron (NM_018489, intron 8 of 27) -32858 NR_030282 693140 NR_030282 ENSG00000283701 MIR555 MIRN555|hsa-mir-555 microRNA 555 ncRNA chr11-8018 chr11 14275275 14275485 + 5.42 0.000 Intergenic L1MEc|LINE|L1 83105 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr14-5062 chr14 83126554 83126764 + 5.42 0.000 Intergenic Intergenic 484027 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr20-3939 chr20 33276173 33276383 + 5.42 0.000 Intergenic Intergenic -6936 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr5-5201 chr5 113051140 113051350 + 5.42 0.000 intron (NM_001085377, intron 15 of 18) L1MEd|LINE|L1 74447 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr2-10928 chr2 74671252 74671462 + 5.42 0.000 intron (NM_001271662, intron 4 of 12) intron (NM_001271662, intron 4 of 12) 17110 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr20-4312 chr20 51502493 51502703 + 5.42 0.000 intron (NM_012340, intron 3 of 10) AluJo|SINE|Alu 40121 NM_012340 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr7-2624 chr7 1249780 1249990 + 5.42 0.000 Intergenic Intergenic 17013 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr2-12390 chr2 54291624 54291834 + 5.42 0.000 intron (NM_001320589, intron 4 of 4) intron (NM_001320589, intron 4 of 4) -35500 NM_001003937 388951 Hs.620508 NM_001003937 ENSG00000178021 TSPYL6 - TSPY like 6 protein-coding chr6-2792 chr6 144248984 144249194 + 5.42 0.000 Intergenic Intergenic -42648 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr15-4214 chr15 26457119 26457329 + 5.42 0.000 Intergenic Intergenic 171866 NR_103801 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chrX-5216 chrX 135303548 135303758 + 5.42 0.000 intron (NM_007131, intron 1 of 6) LTR5_Hs|LTR|ERVK -5827 NM_001358449 110806299 NM_001358449 ENSG00000283644 ETDC - embryonic testis differentiation homolog C protein-coding chr7-8707 chr7 74466267 74466477 + 5.42 0.000 intron (NM_016328, intron 1 of 26) intron (NM_016328, intron 1 of 26) 12466 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr4-8348 chr4 147511131 147511341 + 5.42 0.000 intron (NM_001166055, intron 2 of 5) intron (NM_001166055, intron 2 of 5) 30139 NR_148963 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr7-7651 chr7 145677236 145677446 + 5.42 0.000 Intergenic MSTD|LTR|ERVL-MaLR -841288 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding KI270722.1-4 KI270722.1 176683 176893 + 5.42 0.000 NA NA NA NA chr3-4821 chr3 136463604 136463814 + 5.42 0.000 intron (NM_005862, intron 13 of 33) FLAM_C|SINE|Alu 213369 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr6-8469 chr6 155529179 155529389 + 5.42 0.000 Intergenic Intergenic 14440 NR_134597 105378068 Hs.131541 NR_134596 LOC105378068 - uncharacterized LOC105378068 ncRNA chrX-3294 chrX 107292551 107292761 + 5.42 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 86024 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr20-3699 chr20 15120450 15120660 + 5.42 0.000 intron (NM_001351663, intron 5 of 17) intron (NM_001351663, intron 5 of 17) -76285 NM_001351664 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr17-7331 chr17 5798102 5798312 + 5.42 0.000 intron (NR_040000, intron 1 of 3) LTR16D|LTR|ERVL 25973 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr15-2779 chr15 33740419 33740629 + 5.42 0.000 intron (NM_001243996, intron 51 of 102) intron (NM_001243996, intron 51 of 102) -227973 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr19-6866 chr19 44503968 44504178 + 5.42 0.000 Intergenic Intergenic -3551 NM_001288759 7733 Hs.22305 NM_013256 ENSG00000167384 ZNF180 HHZ168 zinc finger protein 180 protein-coding chr7-4699 chr7 44867725 44867935 + 5.42 0.000 Intergenic Intergenic 13970 NR_039801 100616393 NR_039801 ENSG00000284261 MIR4657 mir-4657 microRNA 4657 ncRNA chr2-10170 chr2 87090598 87090808 + 5.42 0.000 Intergenic Intergenic -14290 NR_026846 285074 Hs.424184 NM_001012626 ENSG00000285793 LOC285074 - anaphase promoting complex subunit 1 pseudogene pseudo chr9-8113 chr9 99431082 99431292 + 5.42 0.000 Intergenic Intergenic -55930 NR_102271 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr10-7512 chr10 13357200 13357410 + 5.42 0.000 Intergenic (TCCT)n|Simple_repeat|Simple_repeat -9007 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr2-12329 chr2 47797744 47797954 + 5.42 0.000 intron (NM_001281494, intron 3 of 9) intron (NM_001281494, intron 3 of 9) 13894 NM_001281494 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr11-9025 chr11 25910698 25910908 + 5.42 0.000 Intergenic Intergenic -278320 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr7-6083 chr7 116598698 116598908 + 5.42 0.000 intron (NR_120506, intron 2 of 4) MLT1G|LTR|ERVL-MaLR 16017 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr11-9436 chr11 60936961 60937171 + 5.42 0.000 TTS (NM_017870) TTS (NM_017870) 12606 NM_017870 54972 Hs.118552 NM_017870 ENSG00000006118 TMEM132A GBP|HSPA5BP1 transmembrane protein 132A protein-coding chr12-4024 chr12 41857729 41857939 + 5.42 0.000 Intergenic MER63A|DNA|hAT-Blackjack 93645 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr22-1950 chr22 48552694 48552904 + 5.42 0.000 intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) -5412 NR_038917 284933 Hs.159057 NR_038917 ENSG00000281732 LOC284933 - uncharacterized LOC284933 ncRNA chr17-7998 chr17 49465686 49465896 + 5.42 0.000 Intergenic MIRb|SINE|MIR -4042 NR_110805 101927207 Hs.638402 NR_110805 ENSG00000249497 LINC02075 - long intergenic non-protein coding RNA 2075 ncRNA chr2-13281 chr2 128277105 128277315 + 5.42 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 41658 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr1-11136 chr1 234523923 234524133 + 5.42 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat 7751 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr8-6090 chr8 27092962 27093172 + 5.42 0.000 Intergenic Intergenic -44104 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA chr2-5423 chr2 113439831 113440041 + 5.42 0.000 intron (NR_138474, intron 2 of 16) AluYa5|SINE|Alu 2245 NM_001330337 150472 Hs.531330 NM_172003 ENSG00000136682 CBWD2 - COBW domain containing 2 protein-coding chr8-3189 chr8 108266515 108266725 + 5.42 0.000 Intergenic Intergenic -17903 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr13-4476 chr13 113256265 113256475 + 5.42 0.000 intron (NM_001008895, intron 18 of 19) intron (NM_001008895, intron 18 of 19) -6550 NR_107042 102465874 NR_107042 ENSG00000277942 MIR8075 hsa-mir-8075 microRNA 8075 ncRNA chr6-7382 chr6 49847582 49847792 + 5.42 0.000 intron (NM_170609, intron 4 of 6) intron (NM_170609, intron 4 of 6) 18848 NM_001131 167 Hs.109620 NM_001131 ENSG00000124812 CRISP1 AEGL1|ARP|CRISP-1|HEL-S-57|HSCRISP1D|HSCRISP1G|HUMARP cysteine rich secretory protein 1 protein-coding chrX-3558 chrX 68525651 68525861 + 5.42 0.000 intron (NM_001195214, intron 5 of 5) L1PA7|LINE|L1 26705 NM_173834 286451 Hs.82719 NM_173834 ENSG00000181704 YIPF6 FinGER6 Yip1 domain family member 6 protein-coding chr3-6909 chr3 156764591 156764801 + 5.42 0.000 intron (NR_038387, intron 1 of 2) AluSg|SINE|Alu 47325 NR_003284 647033 Hs.745109 NR_003284 PA2G4P4 PA2G4L1 proliferation-associated 2G4 pseudogene 4 pseudo chr2-10389 chr2 177769746 177769956 + 5.42 0.000 intron (NM_001077197, intron 10 of 20) AluJb|SINE|Alu 96529 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA chr11-8328 chr11 76660248 76660458 + 5.42 0.000 exon (NM_001128922, exon 3 of 3) exon (NM_001128922, exon 3 of 3) 9585 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr16-5697 chr16 76492107 76492317 + 5.42 0.000 intron (NR_136213, intron 13 of 23) L1MA9|LINE|L1 -142786 NR_110934 101928203 Hs.737035 NR_110934 ENSG00000250514 LINC02125 - long intergenic non-protein coding RNA 2125 ncRNA chr5-7506 chr5 35799172 35799382 + 5.42 0.000 intron (NM_024867, intron 33 of 36) intron (NM_024867, intron 33 of 36) -57614 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr22-3823 chr22 31170229 31170439 + 5.42 0.000 intron (NR_024212, intron 1 of 5) AluY|SINE|Alu 10152 NR_024212 91445 Hs.517553 NM_152267 ENSG00000138942 RNF185 - ring finger protein 185 protein-coding chr5-6443 chr5 161808481 161808691 + 5.42 0.000 Intergenic L1PB4|LINE|L1 -38605 NM_000806 2554 Hs.175934 NM_000806 ENSG00000022355 GABRA1 ECA4|EIEE19|EJM|EJM5 gamma-aminobutyric acid type A receptor alpha1 subunit protein-coding chr11-9157 chr11 34737711 34737921 + 5.42 0.000 Intergenic L1P3|LINE|L1 105250 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr1-8200 chr1 22585083 22585293 + 5.42 0.000 intron (NM_020526, intron 3 of 16) L2c|LINE|L2 21699 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr10-4838 chr10 13657466 13657676 + 5.42 0.000 intron (NM_001318336, intron 20 of 23) intron (NM_001318336, intron 20 of 23) 49996 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chrX-5243 chrX 137247268 137247478 + 5.42 0.000 Intergenic L2|LINE|L2 -215699 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr10-7445 chr10 6937002 6937212 + 5.42 0.000 Intergenic Intergenic 157509 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr5-2815 chr5 27095543 27095753 + 5.42 0.000 Intergenic L2a|LINE|L2 -57062 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr8-7304 chr8 132434902 132435112 + 5.42 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 12255 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chrX-5268 chrX 139421950 139422160 + 5.42 0.000 Intergenic Intergenic -24764 NR_028597 6719 Hs.730315 NR_028597 SRD5A1P1 SRD5AP1 steroid 5 alpha-reductase 1 pseudogene 1 pseudo chrX-3985 chrX 14237763 14237973 + 5.42 0.000 Intergenic Intergenic -6397 NR_110506 286480 Hs.567831 NR_110506 UBE2E4P UbcM2 ubiquitin conjugating enzyme E2 E4 pseudogene pseudo chr9-8154 chr9 103954782 103954992 + 5.42 0.000 Intergenic MLT2B4|LTR|ERVL -44822 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr5-7822 chr5 66806170 66806380 + 5.42 0.000 intron (NM_001290228, intron 3 of 4) intron (NM_001290228, intron 3 of 4) -22498 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr8-6507 chr8 65545989 65546199 + 5.42 0.000 intron (NR_033893, intron 1 of 4) AluSx1|SINE|Alu 16572 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr15-3452 chr15 92359503 92359713 + 5.42 0.000 Intergenic Intergenic -34273 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr8-5703 chr8 126463373 126463583 + 5.42 0.000 Intergenic Intergenic 95000 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr3-9684 chr3 64344738 64344948 + 5.42 0.000 Intergenic Intergenic -76670 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr3-10864 chr3 168664444 168664654 + 5.42 0.000 intron (NR_021485, intron 5 of 15) intron (NR_021485, intron 5 of 15) 112695 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr13-4222 chr13 94455127 94455337 + 5.42 0.000 intron (NM_001129889, intron 6 of 9) AluJr|SINE|Alu 24450 NM_001922 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr9-6175 chr9 83583006 83583216 + 5.42 0.000 Intergenic Intergenic -39938 NM_001256915 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding chr5-3081 chr5 37640198 37640408 + 5.42 0.000 intron (NM_001345998, intron 10 of 17) intron (NM_001345998, intron 10 of 17) 194519 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr18-2739 chr18 76167488 76167698 + 5.42 0.000 Intergenic Intergenic -41917 NR_146507 105372207 Hs.303880 NR_146507 LINC01893 - long intergenic non-protein coding RNA 1893 ncRNA chr14-4054 chr14 57518959 57519169 + 5.42 0.000 Intergenic L1PA6|LINE|L1 -25207 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr10-8347 chr10 79952117 79952327 + 5.42 0.000 Intergenic L1PA15-16|LINE|L1 -3117 NM_003019 6441 Hs.253495 NM_003019 ENSG00000133661 SFTPD COLEC7|PSP-D|SFTP4|SP-D surfactant protein D protein-coding chr10-8419 chr10 84944142 84944352 + 5.42 0.000 Intergenic Intergenic 254658 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr13-3325 chr13 60321034 60321244 + 5.42 0.000 Intergenic Intergenic -53035 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr13-2644 chr13 79338456 79338666 + 5.42 0.000 intron (NM_022118, intron 17 of 20) L2|LINE|L2 67660 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr2-10733 chr2 31032683 31032893 + 5.42 0.000 intron (NM_024572, intron 1 of 14) intron (NM_024572, intron 1 of 14) 96852 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr2-7518 chr2 20661791 20662001 + 5.42 0.000 Intergenic Intergenic -5248 NM_182828 151449 Hs.447688 NM_182828 ENSG00000143869 GDF7 BMP12 growth differentiation factor 7 protein-coding chr10-7136 chr10 100653917 100654127 + 5.42 0.000 Intergenic Intergenic -81374 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr16-5589 chr16 50699963 50700173 + 5.42 0.000 intron (NR_163434, intron 2 of 12) intron (NR_163434, intron 2 of 12) 688 NM_001293557 64127 Hs.592072 NM_022162 ENSG00000167207 NOD2 ACUG|BLAU|BLAUS|CARD15|CD|CLR16.3|IBD1|NLRC2|NOD2B|PSORAS1|YAOS nucleotide binding oligomerization domain containing 2 protein-coding chr6-6878 chr6 11252091 11252301 + 5.42 0.000 intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) -19514 NM_001271033 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr14-2559 chr14 31903352 31903562 + 5.42 0.000 Intergenic L2a|LINE|L2 -41396 NR_146544 105370439 NR_146544 ENSG00000258474 LINC02313 - long intergenic non-protein coding RNA 2313 ncRNA chrX-3380 chrX 151981109 151981319 + 5.42 0.000 Intergenic L2a|LINE|L2 -6538 NM_004961 2564 Hs.22785 NM_004961 ENSG00000102287 GABRE - gamma-aminobutyric acid type A receptor epsilon subunit protein-coding chr2-11998 chr2 27954875 27955085 + 5.42 0.000 intron (NM_199193, intron 4 of 13) intron (NM_199193, intron 4 of 13) -41387 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA chr3-10893 chr3 170929660 170929870 + 5.42 0.000 Intergenic L1PA3|LINE|L1 -21128 NM_020390 56648 Hs.164144 NM_020390 ENSG00000163577 EIF5A2 EIF-5A2|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding chr17-5416 chr17 34726842 34727052 + 5.42 0.000 Intergenic Intergenic 146198 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr9-7933 chr9 89998530 89998740 + 5.42 0.000 Intergenic Intergenic 24900 NR_036253 100422963 NR_036253 ENSG00000263967 MIR4290 - microRNA 4290 ncRNA chr16-4374 chr16 48762430 48762640 + 5.42 0.000 Intergenic L1PA6|LINE|L1 -152355 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr8-3955 chr8 47919482 47919692 + 5.42 0.000 intron (NM_001081640, intron 21 of 84) intron (NM_001081640, intron 21 of 84) 40549 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr9-7355 chr9 15661998 15662208 + 5.42 0.000 intron (NM_001355547, intron 7 of 24) AluSz6|SINE|Alu 98125 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr15-4565 chr15 58361195 58361405 + 5.42 0.000 Intergenic Intergenic -70691 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr22-3768 chr22 28054645 28054855 + 5.42 0.000 intron (NM_001145418, intron 12 of 22) intron (NM_001145418, intron 12 of 22) -134138 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr2-14087 chr2 199470231 199470441 + 5.42 0.000 non-coding (NR_026830, exon 2 of 2) non-coding (NR_026830, exon 2 of 2) 930 NM_015265 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr4-4474 chr4 56040847 56041057 + 5.42 0.000 Intergenic HERVL40-int|LTR|ERVL 92007 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr16-6318 chr16 48542118 48542328 + 5.42 0.000 3' UTR (NM_153029, exon 7 of 7) 3' UTR (NM_153029, exon 7 of 7) 67957 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr1-12431 chr1 11973557 11973767 + 5.30 0.000 intron (NM_001316320, intron 19 of 19) AluJb|SINE|Alu -6519 NM_014874 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr1-10525 chr1 169116187 169116397 + 5.30 0.000 intron (NM_001677, intron 2 of 5) intron (NM_001677, intron 2 of 5) 9602 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr1-15113 chr1 101308229 101308439 + 5.30 0.000 Intergenic MER39|LTR|ERV1 -15503 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr1-11879 chr1 43591413 43591623 + 5.30 0.000 exon (NM_001329139, exon 9 of 33) exon (NM_001329139, exon 9 of 33) -58631 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr5-2569 chr5 38616120 38616330 + 5.30 0.000 intron (NR_103554, intron 2 of 8) intron (NR_103554, intron 2 of 8) -20820 NM_002310 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS LIF receptor subunit alpha protein-coding chr9-4840 chr9 137834440 137834650 + 5.30 0.000 intron (NM_001354263, intron 26 of 26) CpG-29263 -3874 NR_030333 693187 NR_030333 ENSG00000207693 MIR602 MIRN602|hsa-mir-602 microRNA 602 ncRNA chr1-9071 chr1 15390264 15390474 + 5.30 0.000 intron (NM_052929, intron 30 of 30) intron (NM_052929, intron 30 of 30) -19519 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr1-12824 chr1 87662297 87662507 + 5.30 0.000 Intergenic AluJb|SINE|Alu -290747 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr7-7614 chr7 132712785 132712995 + 5.30 0.000 intron (NR_046323, intron 3 of 4) intron (NR_046323, intron 3 of 4) -46080 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr12-4425 chr12 8673496 8673706 + 5.30 0.000 Intergenic AluSx|SINE|Alu -7999 NR_123740 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr17-8309 chr17 70973980 70974190 + 5.30 0.000 Intergenic Intergenic 228094 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr1-13108 chr1 190862694 190862904 + 5.30 0.000 Intergenic L1P4a|LINE|L1 237909 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA chr17-7005 chr17 51825372 51825582 + 5.30 0.000 intron (NM_001082533, intron 4 of 9) MIR|SINE|MIR 333237 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr14-3590 chr14 34426265 34426475 + 5.30 0.000 Intergenic HERVL40-int|LTR|ERVL 35870 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr6-6482 chr6 112980809 112981019 + 5.30 0.000 Intergenic Intergenic 452533 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr2-9988 chr2 15002295 15002505 + 5.30 0.000 Intergenic LTR12C|LTR|ERV1 369683 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr7-3252 chr7 2851451 2851661 + 5.30 0.000 Intergenic L1MEd|LINE|L1 -7248 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr6-7341 chr6 46312263 46312473 + 5.30 0.000 intron (NR_125838, intron 2 of 3) intron (NR_125838, intron 2 of 3) 13524 NM_005822 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr15-4005 chr15 57003563 57003773 + 5.30 0.000 intron (NM_001322164, intron 3 of 19) Tigger17a|DNA|TcMar-Tigger 84223 NM_001322164 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr14-4668 chr14 55430164 55430374 + 5.30 0.000 intron (NM_199047, intron 4 of 6) intron (NM_199047, intron 4 of 6) 10276 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr1-8703 chr1 227192251 227192461 + 5.30 0.000 intron (NM_001366019, intron 5 of 36) MER5A|DNA|hAT-Charlie 126136 NM_001366010 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr16-5032 chr16 56667907 56668117 + 5.30 0.000 promoter-TSS (NM_001301267) promoter-TSS (NM_001301267) 53 NM_005950 4495 Hs.433391 NM_005950 ENSG00000125144 MT1G MT1|MT1K metallothionein 1G protein-coding chr5-5985 chr5 127987908 127988118 + 5.30 0.000 intron (NR_152803, intron 1 of 1) intron (NR_152803, intron 1 of 1) 95162 NR_152811 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA chr4-3479 chr4 128315911 128316121 + 5.30 0.000 Intergenic L2c|LINE|L2 -28203 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chr8-5022 chr8 14846710 14846920 + 5.30 0.000 intron (NM_139167, intron 1 of 7) AluSx|SINE|Alu 6695 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr6-7484 chr6 61032204 61032414 + 5.30 0.000 Intergenic SATR1|Satellite|Satellite -541821 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr6-6180 chr6 9941224 9941434 + 5.30 0.000 Intergenic Intergenic -463173 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr2-9754 chr2 85015715 85015925 + 5.30 0.000 intron (NM_020122, intron 1 of 6) intron (NM_020122, intron 1 of 6) 44659 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr7-7587 chr7 127610854 127611064 + 5.30 0.000 exon (NM_001366111, exon 10 of 10) exon (NM_001366111, exon 10 of 10) 5068 NM_001366111 5078 Hs.129706 NM_006193 ENSG00000106331 PAX4 KPD|MODY9 paired box 4 protein-coding chr7-8611 chr7 67766602 67766812 + 5.30 0.000 Intergenic Intergenic -253546 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr11-10582 chr11 122857823 122858033 + 5.30 0.000 intron (NM_019604, intron 5 of 9) AluJb|SINE|Alu -4403 NM_001304782 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr14-4735 chr14 61227775 61227985 + 5.30 0.000 Intergenic Intergenic 53458 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr21-1336 chr21 28445139 28445349 + 5.30 0.000 Intergenic Intergenic -94074 NR_026553 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr4-8175 chr4 130600256 130600466 + 5.30 0.000 Intergenic Intergenic 224000 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr6-5201 chr6 131917420 131917630 + 5.30 0.000 Intergenic Intergenic 33847 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr10-4828 chr10 12784890 12785100 + 5.30 0.000 intron (NM_001351032, intron 7 of 11) intron (NM_001351032, intron 7 of 11) -59642 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr16-5312 chr16 72240839 72241049 + 5.30 0.000 Intergenic (GA)n|Simple_repeat|Simple_repeat -68494 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr2-14397 chr2 220029218 220029428 + 5.30 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -122758 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr2-14070 chr2 198173854 198174064 + 5.30 0.000 Intergenic Intergenic 201138 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr5-3914 chr5 170552744 170552954 + 5.30 0.000 intron (NM_001278339, intron 1 of 7) L2a|LINE|L2 48829 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr7-9750 chr7 158741344 158741554 + 5.30 0.000 intron (NM_020728, intron 17 of 21) intron (NM_020728, intron 17 of 21) -36645 NM_001281933 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr2-5903 chr2 1656723 1656933 + 5.30 0.000 intron (NM_012293, intron 14 of 22) intron (NM_012293, intron 14 of 22) 87687 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr20-3815 chr20 23604621 23604831 + 5.30 0.000 intron (NM_001008693, intron 1 of 1) intron (NM_001008693, intron 1 of 1) 1247 NM_001008693 128822 Hs.698020 NM_001008693 ENSG00000173335 CST9 CLM|CTES7A cystatin 9 protein-coding chr21-1620 chr21 20293557 20293767 + 5.30 0.000 Intergenic Intergenic -34977 NR_151724 111216285 Hs.561034 NR_151724 LINC02573 - long intergenic non-protein coding RNA 2573 ncRNA chr1-16273 chr1 212791906 212792116 + 5.30 0.000 promoter-TSS (NM_001297739) promoter-TSS (NM_001297739) 117 NM_001146169 128387 Hs.530538 NM_001042552 ENSG00000203705 TATDN3 - TatD DNase domain containing 3 protein-coding chr7-7556 chr7 117209526 117209736 + 5.30 0.000 intron (NR_002332, intron 8 of 8) intron (NR_002332, intron 8 of 8) 26950 NR_002332 93655 Hs.368131 NR_002332 ENSG00000004866 ST7-OT3 NCRNA00026|ST7|ST7OT3 ST7 overlapping transcript 3 ncRNA chr6-6990 chr6 20042277 20042487 + 5.30 0.000 Intergenic Intergenic 170087 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr10-7802 chr10 37702387 37702597 + 5.30 0.000 Intergenic Intergenic 92683 NR_051997 100419868 Hs.741719 NR_051997 ZNF33BP1 - zinc finger protein 33B pseudogene 1 pseudo chr1-8685 chr1 216554332 216554542 + 5.30 0.000 intron (NM_001243518, intron 6 of 7) AluSq2|SINE|Alu -130989 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr4-4114 chr4 6620299 6620509 + 5.30 0.000 intron (NM_001292038, intron 18 of 18) intron (NM_001292038, intron 18 of 18) -19687 NM_001272053 93621 Hs.406590 NM_033296 ENSG00000179010 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding chr6-7633 chr6 79760781 79760991 + 5.30 0.000 Intergenic AluJr4|SINE|Alu 51360 NR_131786 89758 Hs.288213 NM_001243308 LINC01621 C6orf7 long intergenic non-protein coding RNA 1621 ncRNA chr9-8302 chr9 114025353 114025563 + 5.30 0.000 intron (NM_133374, intron 10 of 13) intron (NM_133374, intron 10 of 13) 52842 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr1-7668 chr1 15584949 15585159 + 5.30 0.000 promoter-TSS (NM_024758) promoter-TSS (NM_024758) -3 NM_024758 79814 Hs.461532 NM_024758 ENSG00000116771 AGMAT - agmatinase protein-coding chr2-11237 chr2 166903599 166903809 + 5.30 0.000 exon (NM_001079810, exon 2 of 10) exon (NM_001079810, exon 2 of 10) 15217 NM_001199143 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr5-4796 chr5 57089586 57089796 + 5.30 0.000 Intergenic LTR71B|LTR|ERV1 -84257 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr2-7369 chr2 2758997 2759207 + 5.30 0.000 Intergenic Intergenic 366924 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr9-7241 chr9 3113993 3114203 + 5.30 0.000 Intergenic L4_B_Mam|LINE|RTE-X -67491 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr11-9827 chr11 71961789 71961999 + 5.30 0.000 intron (NM_018320, intron 3 of 8) intron (NM_018320, intron 3 of 8) 32848 NM_018320 55298 Hs.368554 NM_018320 ENSG00000137522 RNF121 - ring finger protein 121 protein-coding chr3-7958 chr3 167489766 167489976 + 5.30 0.000 intron (NM_001348951, intron 18 of 18) intron (NM_001348951, intron 18 of 18) -15739 NM_001012303 5276 Hs.445555 NM_006217 ENSG00000114204 SERPINI2 MEPI|PANCPIN|PI14|TSA2004 serpin family I member 2 protein-coding chr8-6529 chr8 67452408 67452618 + 5.30 0.000 intron (NR_136224, intron 2 of 4) L2c|LINE|L2 108679 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr5-3674 chr5 170344332 170344542 + 5.30 0.000 Intergenic MER4D1|LTR|ERV1 -9050 NM_001034838 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr4-6517 chr4 164977441 164977651 + 5.30 0.000 5' UTR (NM_001012414, exon 1 of 5) 5' UTR (NM_001012414, exon 1 of 5) 111 NM_001012414 391712 Hs.654633 NM_001012414 ENSG00000183439 TRIM61 RNF35 tripartite motif containing 61 protein-coding chr1-15799 chr1 176780033 176780243 + 5.30 0.000 intron (NM_020318, intron 17 of 22) intron (NM_020318, intron 17 of 22) 249307 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr2-10251 chr2 118503626 118503836 + 5.30 0.000 Intergenic L2|LINE|L2 99235 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr5-2264 chr5 32208482 32208692 + 5.30 0.000 Intergenic SVA_F|Retroposon|SVA -34268 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr18-3266 chr18 50766294 50766504 + 5.30 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 53617 NM_031939 83876 Hs.30495 NM_031939 ENSG00000134042 MRO B29|C18orf3 maestro protein-coding chr7-5586 chr7 48453608 48453818 + 5.30 0.000 intron (NM_152701, intron 42 of 61) intron (NM_152701, intron 42 of 61) 282255 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr19-5883 chr19 46390383 46390593 + 5.30 0.000 3' UTR (NM_006247, exon 13 of 13) 3' UTR (NM_006247, exon 13 of 13) 23076 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr15-4849 chr15 74731344 74731554 + 5.30 0.000 Intergenic Intergenic -5921 NM_001319216 1543 Hs.72912 NM_000499 ENSG00000140465 CYP1A1 AHH|AHRR|CP11|CYP1|CYPIA1|P1-450|P450-C|P450DX cytochrome P450 family 1 subfamily A member 1 protein-coding chr18-1500 chr18 79422145 79422355 + 5.30 0.000 intron (NM_001278672, intron 2 of 8) intron (NM_001278672, intron 2 of 8) 21951 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr15-4927 chr15 77872696 77872906 + 5.30 0.000 Intergenic Intergenic -51901 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr11-9219 chr11 38997149 38997359 + 5.30 0.000 Intergenic MER61B|LTR|ERV1 348396 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr9-7848 chr9 84569399 84569609 + 5.30 0.000 Intergenic Intergenic -98954 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr17-7275 chr17 3433431 3433641 + 5.30 0.000 exon (NM_003554, exon 1 of 1) exon (NM_003554, exon 1 of 1) 305 NM_003554 8388 Hs.533931 NM_003554 ENSG00000127780 OR1E2 OR17-135|OR17-136|OR17-93|OR1E4|OR1E7|OST529 olfactory receptor family 1 subfamily E member 2 protein-coding chr20-3250 chr20 398397 398607 + 5.30 0.000 TTS (NM_021158) TTS (NM_021158) -9548 NM_001323956 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr5-8339 chr5 118862024 118862234 + 5.30 0.000 intron (NM_001308081, intron 4 of 5) MER1B|DNA|hAT-Charlie -112457 NR_128710 103504734 NR_128710 ENSG00000283475 MIR1244-4 hsa-mir-1244-4 microRNA 1244-4 ncRNA chrX-3657 chrX 100558445 100558655 + 5.30 0.000 Intergenic L1MA2|LINE|L1 -26386 NM_022144 64102 Hs.132957 NM_022144 ENSG00000000005 TNMD BRICD4|CHM1L|TEM tenomodulin protein-coding chr11-10434 chr11 116470475 116470685 + 5.30 0.000 Intergenic Intergenic -168842 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr10-8268 chr10 75896510 75896720 + 5.30 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 113854 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr1-14174 chr1 32827451 32827661 + 5.30 0.000 intron (NR_135106, intron 2 of 7) AluSx|SINE|Alu 2243 NR_135106 64766 Hs.440880 NM_022753 ENSG00000116497 S100PBP S100PBPR S100P binding protein protein-coding chr1-7454 chr1 60866264 60866474 + 5.30 0.000 Intergenic Intergenic -40785 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr17-6780 chr17 3183880 3184090 + 5.30 0.000 Intergenic Intergenic -7050 NR_147912 100288728 Hs.579219 NR_147912 ENSG00000261848 LOC100288728 - uncharacterized LOC100288728 ncRNA chr6-7303 chr6 44008913 44009123 + 5.30 0.000 intron (NR_125864, intron 1 of 4) L3|LINE|CR1 -5368 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr2-12803 chr2 88426542 88426752 + 5.30 0.000 Intergenic AluSc|SINE|Alu 26046 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr4-7836 chr4 101481083 101481293 + 5.30 0.000 Intergenic Intergenic 133411 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr7-8088 chr7 25257731 25257941 + 5.30 0.000 Intergenic Intergenic -29350 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chrX-3281 chrX 101410462 101410672 + 5.30 0.000 intron (NM_019597, intron 1 of 1) intron (NM_019597, intron 1 of 1) 2345 NM_019597 3188 Hs.432485 NM_019597 ENSG00000126945 HNRNPH2 FTP3|HNRPH'|HNRPH2|MRXSB|NRPH2|hnRNPH' heterogeneous nuclear ribonucleoprotein H2 protein-coding chr12-7367 chr12 56666638 56666848 + 5.30 0.000 intron (NM_001282602, intron 4 of 6) AluSz6|SINE|Alu -20759 NM_001686 506 Hs.406510 NM_001686 ENSG00000110955 ATP5F1B ATP5B|ATPMB|ATPSB|HEL-S-271 ATP synthase F1 subunit beta protein-coding chr1-11747 chr1 18410581 18410791 + 5.30 0.000 Intergenic Intergenic -70244 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr3-9933 chr3 88479414 88479624 + 5.30 0.000 Intergenic Charlie5|DNA|hAT-Charlie 141063 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr1-15533 chr1 157221903 157222113 + 5.30 0.000 Intergenic L1MA8|LINE|L1 -83417 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr9-6546 chr9 116716928 116717138 + 5.30 0.000 intron (NM_014010, intron 15 of 21) MIRc|SINE|MIR 29728 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr14-4406 chr14 30770665 30770875 + 5.30 0.000 Intergenic Intergenic -103765 NM_001347720 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr8-5888 chr8 16022094 16022304 + 5.30 0.000 Intergenic L1PA16|LINE|L1 164073 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr15-5040 chr15 84090938 84091148 + 5.30 0.000 intron (NR_036652, intron 4 of 9) L1ME4a|LINE|L1 10856 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr6-7569 chr6 72315213 72315423 + 5.30 0.000 intron (NM_001350466, intron 19 of 24) intron (NM_001350466, intron 19 of 24) -51428 NM_001168411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr3-11055 chr3 183800786 183800996 + 5.30 0.000 intron (NM_001351369, intron 24 of 30) intron (NM_001351369, intron 24 of 30) 9560 NR_046727 100874113 NR_046727 YEATS2-AS1 - YEATS2 antisense RNA 1 ncRNA chr5-6969 chr5 144547849 144548059 + 5.30 0.000 Intergenic MIRc|SINE|MIR 342563 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr7-1654 chr7 66529316 66529526 + 5.30 0.000 TTS (NR_111973) TTS (NR_111973) 35730 NR_134571 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr1-8119 chr1 9843331 9843541 + 5.30 0.000 Intergenic Intergenic -18910 NM_001009566 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr14-3100 chr14 64825502 64825712 + 5.30 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) -2227 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chrX-4948 chrX 111996777 111996987 + 5.30 0.000 intron (NM_012471, intron 1 of 10) L1PA6|LINE|L1 85894 NM_012471 7224 Hs.657709 NM_012471 ENSG00000072315 TRPC5 PPP1R159|TRP5 transient receptor potential cation channel subfamily C member 5 protein-coding chr1-12622 chr1 38537059 38537269 + 5.30 0.000 Intergenic Intergenic 61968 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr12-7462 chr12 63983403 63983613 + 5.30 0.000 intron (NM_001346201, intron 1 of 21) intron (NM_001346201, intron 1 of 21) 138808 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr17-3652 chr17 6544999 6545209 + 5.30 0.000 intron (NM_031220, intron 1 of 19) MIR|SINE|MIR 11451 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr5-5423 chr5 136664282 136664492 + 5.30 0.000 Intergenic Intergenic -298911 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr1-12707 chr1 53674975 53675185 + 5.30 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 59124 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr12-4306 chr12 124644518 124644728 + 5.30 0.000 Intergenic L1ME3|LINE|L1 -77011 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr11-10129 chr11 88751174 88751384 + 5.30 0.000 intron (NM_001143831, intron 2 of 8) L1PA11|LINE|L1 246703 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chrX-3399 chrX 5752424 5752634 + 5.30 0.000 Intergenic Intergenic -473829 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr2-11625 chr2 4390900 4391110 + 5.30 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 265217 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA chr1-16226 chr1 209229222 209229432 + 5.30 0.000 Intergenic Intergenic -96129 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr3-9632 chr3 59320579 59320789 + 5.30 0.000 Intergenic Intergenic -270652 NM_001351534 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr2-7265 chr2 233026984 233027194 + 5.30 0.000 Intergenic AluSx|SINE|Alu -5583 NM_005383 4759 Hs.532681 NM_005383 ENSG00000115488 NEU2 SIAL2 neuraminidase 2 protein-coding chr1-11836 chr1 33458066 33458276 + 5.30 0.000 Intergenic AluY|SINE|Alu -14474 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr15-5226 chr15 96645252 96645462 + 5.30 0.000 Intergenic Intergenic 136297 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr5-4696 chr5 39772428 39772638 + 5.30 0.000 Intergenic Charlie17b|DNA|hAT-Charlie 252102 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr5-8291 chr5 114020476 114020686 + 5.30 0.000 Intergenic Intergenic -341489 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr1-12646 chr1 42950363 42950573 + 5.30 0.000 intron (NM_006516, intron 1 of 9) intron (NM_006516, intron 1 of 9) 8400 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr3-7492 chr3 153977303 153977513 + 5.30 0.000 Intergenic Intergenic -143595 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr5-8119 chr5 98605716 98605926 + 5.30 0.000 Intergenic Intergenic -162811 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr8-6243 chr8 39963269 39963479 + 5.30 0.000 intron (NM_194294, intron 2 of 10) intron (NM_194294, intron 2 of 10) 28419 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr5-7564 chr5 39864123 39864333 + 5.30 0.000 Intergenic Intergenic -188063 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr3-9947 chr3 90180421 90180631 + 5.30 0.000 Intergenic Intergenic 1072905 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr6-8390 chr6 150302245 150302455 + 5.30 0.000 Intergenic Intergenic -66662 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chrX-5079 chrX 125594167 125594377 + 5.30 0.000 Intergenic L1MC1|LINE|L1 274401 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr1-12239 chr1 215534788 215534998 + 5.30 0.000 Intergenic L1PA5|LINE|L1 -32411 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr14-3436 chr14 98442368 98442578 + 5.30 0.000 Intergenic Intergenic -269140 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr6-5236 chr6 135606214 135606424 + 5.30 0.000 intron (NR_152845, intron 2 of 4) Charlie15a|DNA|hAT-Charlie 108518 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr22-3888 chr22 35371905 35372115 + 5.30 0.000 Intergenic Intergenic -9086 NM_002133 3162 Hs.517581 NM_002133 ENSG00000100292 HMOX1 HMOX1D|HO-1|HSP32|bK286B10 heme oxygenase 1 protein-coding chr6-3425 chr6 113854918 113855128 + 5.30 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -2322 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding chr1-14275 chr1 37179054 37179264 + 5.30 0.000 Intergenic MIR|SINE|MIR 17596 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr5-6526 chr5 6075340 6075550 + 5.30 0.000 Intergenic Intergenic 261847 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr2-12906 chr2 99689048 99689258 + 5.30 0.000 intron (NM_001025108, intron 10 of 23) intron (NM_001025108, intron 10 of 23) -199136 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr16-4352 chr16 31680704 31680914 + 5.30 0.000 Intergenic Intergenic -19804 NR_024034 100132341 Hs.715792 NM_024048 ENSG00000131797 CLUHP3 C16orf67|KIAA0664L3|KIAA0664P3|URLC3 clustered mitochondria homolog pseudogene 3 pseudo chr1-14311 chr1 39469431 39469641 + 5.30 0.000 intron (NM_012090, intron 90 of 92) intron (NM_012090, intron 90 of 92) -22100 NM_181809 353500 Hs.472497 NM_181809 ENSG00000183682 BMP8A - bone morphogenetic protein 8a protein-coding chr10-8098 chr10 68880499 68880709 + 5.30 0.000 intron (NM_152709, intron 1 of 3) L2|LINE|L2 -20711 NM_024045 79009 Hs.522984 NM_024045 ENSG00000107625 DDX50 GU2|GUB|RH-II/GuB|mcdrh DExD-box helicase 50 protein-coding chr2-12450 chr2 59093698 59093908 + 5.30 0.000 Intergenic UCON15|Unknown|Unknown -123905 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr2-6771 chr2 45158749 45158959 + 5.30 0.000 Intergenic AluSz6|SINE|Alu 96087 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr4-8017 chr4 117448246 117448456 + 5.30 0.000 intron (NR_125757, intron 2 of 3) L1MA4A|LINE|L1 19953 NR_125757 103689918 Hs.582062 NR_125757 LINC01378 - long intergenic non-protein coding RNA 1378 ncRNA chr10-5382 chr10 74227382 74227592 + 5.30 0.000 intron (NM_001369124, intron 3 of 9) AluJr|SINE|Alu 50724 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chrX-1646 chrX 133223631 133223841 + 5.30 0.000 Intergenic Intergenic -5382 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr14-2400 chr14 54922755 54922965 + 5.30 0.000 Intergenic Intergenic -20034 NM_001024071 2643 Hs.86724 NM_000161 ENSG00000131979 GCH1 DYT14|DYT5|DYT5a|GCH|GTP-CH-1|GTPCH1|HPABH4B GTP cyclohydrolase 1 protein-coding chr11-8535 chr11 128707835 128708045 + 5.30 0.000 intron (NM_002017, intron 1 of 8) intron (NM_002017, intron 1 of 8) -11917 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr11-8743 chr11 8340618 8340828 + 5.30 0.000 Intergenic Intergenic -71936 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr5-7702 chr5 57034150 57034360 + 5.30 0.000 Intergenic AluJb|SINE|Alu -82125 NM_152622 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr8-4960 chr8 121531514 121531724 + 5.30 0.000 Intergenic Intergenic -107727 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr22-2694 chr22 37417053 37417263 + 5.30 0.000 intron (NM_052906, intron 2 of 2) intron (NM_052906, intron 2 of 2) 10312 NR_110512 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr1-10028 chr1 87914340 87914550 + 5.30 0.000 Intergenic L1MB7|LINE|L1 -542790 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr2-8729 chr2 159073247 159073457 + 5.30 0.000 intron (NM_001350065, intron 4 of 27) intron (NM_001350065, intron 4 of 27) 104712 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr6-7747 chr6 91948083 91948293 + 5.30 0.000 Intergenic L1MC1|LINE|L1 -257760 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr9-8530 chr9 126219220 126219430 + 5.30 0.000 Intergenic L2|LINE|L2 56590 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr15-4355 chr15 41076342 41076552 + 5.30 0.000 intron (NM_017553, intron 9 of 35) intron (NM_017553, intron 9 of 35) 39799 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr1-11528 chr1 159521934 159522144 + 5.30 0.000 Intergenic L1PB4|LINE|L1 13968 NM_001004469 127385 Hs.553587 NM_001004469 ENSG00000184155 OR10J5 OR1-28 olfactory receptor family 10 subfamily J member 5 protein-coding chr7-3875 chr7 105602450 105602660 + 5.30 0.000 Intergenic MER50|LTR|ERV1 -21013 NM_001355527 100130771 Hs.719432 NM_001355526 ENSG00000185055 EFCAB10 - EF-hand calcium binding domain 10 protein-coding chrX-3436 chrX 20314717 20314927 + 5.30 0.000 Intergenic L1ME3|LINE|L1 -47913 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr8-1506 chr8 63678922 63679132 + 5.30 0.000 Intergenic L1M5|LINE|L1 -90403 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr5-6908 chr5 133657245 133657455 + 5.30 0.000 Intergenic Intergenic -44809 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr13-2247 chr13 25845079 25845289 + 5.30 0.000 intron (NM_016529, intron 30 of 36) intron (NM_016529, intron 30 of 36) 205876 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr8-6791 chr8 95099865 95100075 + 5.30 0.000 intron (NR_148914, intron 9 of 11) intron (NR_148914, intron 9 of 11) -26788 NR_132986 105375650 Hs.665518 NR_132986 ENSG00000245080 MIR3150BHG - MIR3150B host gene ncRNA chr12-6227 chr12 28390712 28390922 + 5.30 0.000 intron (NM_001330367, intron 7 of 11) intron (NM_001330367, intron 7 of 11) -200079 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr21-1851 chr21 41920836 41921046 + 5.30 0.000 intron (NM_199050, intron 2 of 12) intron (NM_199050, intron 2 of 12) 5762 NM_199050 25966 Hs.473894 NM_015500 ENSG00000157617 C2CD2 C21orf25|C21orf258|TMEM24L C2 calcium dependent domain containing 2 protein-coding chr17-7007 chr17 52125254 52125464 + 5.30 0.000 intron (NM_001082533, intron 2 of 9) LTR57|LTR|ERVL 33355 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr8-6781 chr8 94406207 94406417 + 5.30 0.000 intron (NM_012415, intron 5 of 14) MIRc|SINE|MIR 30632 NM_001256141 100861412 Hs.30561 NM_001256141 ENSG00000265817 FSBP - fibrinogen silencer binding protein protein-coding chr10-8436 chr10 86012054 86012264 + 5.30 0.000 intron (NM_017551, intron 4 of 15) ERVL-E-int|LTR|ERVL 252629 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr16-4368 chr16 47883202 47883412 + 5.30 0.000 intron (NR_110650, intron 4 of 5) L1PB1|LINE|L1 3823 NR_110649 100507534 Hs.407601 NR_110649 ENSG00000261325 LINC02192 - long intergenic non-protein coding RNA 2192 ncRNA chr9-3109 chr9 68705124 68705334 + 5.30 0.000 promoter-TSS (NM_001278253) promoter-TSS (NM_001278253) -11 NM_003558 8395 Hs.534371 NM_003558 ENSG00000107242 PIP5K1B MSS4|STM7 phosphatidylinositol-4-phosphate 5-kinase type 1 beta protein-coding chr9-6819 chr9 36801521 36801731 + 5.30 0.000 Intergenic Intergenic 21973 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr2-12165 chr2 39165173 39165383 + 5.30 0.000 Intergenic Intergenic -44815 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr22-3777 chr22 28888980 28889190 + 5.30 0.000 intron (NM_001206998, intron 1 of 8) AluSx3|SINE|Alu 5513 NM_001206998 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr5-7184 chr5 6113910 6114120 + 5.30 0.000 Intergenic (TTTA)n|Simple_repeat|Simple_repeat 223277 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr6-6904 chr6 13422733 13422943 + 5.30 0.000 intron (NM_018988, intron 1 of 1) intron (NM_018988, intron 1 of 1) -14701 NM_001242630 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr7-6505 chr7 18167089 18167299 + 5.30 0.000 intron (NM_001321872, intron 2 of 11) intron (NM_001321872, intron 2 of 11) -39885 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr11-9006 chr11 24539878 24540088 + 5.30 0.000 intron (NM_001252008, intron 1 of 11) (TATATA)n|Simple_repeat|Simple_repeat 42930 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr2-14684 chr2 237418269 237418479 + 5.30 0.000 Intergenic LTR16A1|LTR|ERVL -4167 NM_057167 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr12-7803 chr12 98395702 98395912 + 5.30 0.000 Intergenic Intergenic 61338 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr2-13493 chr2 148887295 148887505 + 5.30 0.000 intron (NM_004522, intron 1 of 25) L2b|LINE|L2 12173 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr2-10458 chr2 215425386 215425596 + 5.30 0.000 intron (NM_212482, intron 6 of 45) intron (NM_212482, intron 6 of 45) 10577 NM_001365519 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr7-7848 chr7 4933018 4933228 + 5.30 0.000 intron (NR_072989, intron 1 of 8) AluJo|SINE|Alu 26064 NM_001270375 221938 Hs.558694 NM_198403 ENSG00000136297 MMD2 PAQR10 monocyte to macrophage differentiation associated 2 protein-coding chr9-8174 chr9 105989616 105989826 + 5.30 0.000 Intergenic Intergenic 295180 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr6-5951 chr6 77360179 77360389 + 5.30 0.000 Intergenic Intergenic 103738 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr7-8456 chr7 48041767 48041977 + 5.30 0.000 intron (NM_001100159, intron 3 of 8) intron (NM_001100159, intron 3 of 8) 6329 NM_001100159 136288 Hs.258357 NM_001100159 ENSG00000164746 C7orf57 - chromosome 7 open reading frame 57 protein-coding chr1-15067 chr1 95804426 95804636 + 5.30 0.000 Intergenic Intergenic -187537 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr3-7983 chr3 178308448 178308658 + 5.30 0.000 Intergenic AluSx1|SINE|Alu -110648 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr20-3321 chr20 19091419 19091629 + 5.30 0.000 Intergenic LTR16A2|LTR|ERVL -121118 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr12-7801 chr12 98027137 98027347 + 5.30 0.000 Intergenic Intergenic -31794 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr2-12417 chr2 56287294 56287504 + 5.30 0.000 intron (NM_001348516, intron 2 of 2) L1ME2|LINE|L1 -101629 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr9-7746 chr9 75503173 75503383 + 5.30 0.000 Intergenic Intergenic -387366 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr11-6951 chr11 112814232 112814442 + 5.30 0.000 Intergenic Intergenic -147083 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr2-11617 chr2 3631462 3631672 + 5.30 0.000 intron (NM_199235, intron 4 of 7) intron (NM_199235, intron 4 of 7) 25515 NM_001255989 78989 Hs.32603 NM_024027 ENSG00000118004 COLEC11 3MC2|CL-K1-I|CL-K1-II|CL-K1-IIa|CL-K1-IIb|CLK1 collectin subfamily member 11 protein-coding chr20-4200 chr20 46318550 46318760 + 5.30 0.000 Intergenic Intergenic -10157 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr15-2289 chr15 62737423 62737633 + 5.30 0.000 intron (NM_015059, intron 26 of 55) intron (NM_015059, intron 26 of 55) -86429 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr1-8358 chr1 60443865 60444075 + 5.30 0.000 Intergenic Intergenic 178715 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr8-7404 chr8 139907962 139908172 + 5.30 0.000 intron (NM_001160372, intron 20 of 22) intron (NM_001160372, intron 20 of 22) 192468 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr1-16271 chr1 212593949 212594159 + 5.30 0.000 intron (NM_001030287, intron 1 of 3) L3b|LINE|CR1 -14707 NM_001206484 467 Hs.460 NM_001674 ENSG00000162772 ATF3 - activating transcription factor 3 protein-coding chr7-6147 chr7 124651527 124651737 + 5.30 0.000 Intergenic Intergenic 114160 NM_005302 2861 Hs.406094 NM_005302 ENSG00000170775 GPR37 EDNRBL|PAELR|hET(B)R-LP G protein-coupled receptor 37 protein-coding chr17-5187 chr17 12985707 12985917 + 5.30 0.000 intron (NM_001321166, intron 19 of 19) intron (NM_001321166, intron 19 of 19) 32215 NM_018127 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr9-5336 chr9 88443415 88443625 + 5.30 0.000 intron (NM_006717, intron 2 of 5) L1MC1|LINE|L1 55076 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr6-7982 chr6 114535451 114535661 + 5.30 0.000 Intergenic Intergenic -472679 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr4-8729 chr4 184265555 184265765 + 5.30 0.000 Intergenic L1M6|LINE|L1 -47787 NM_153343 133121 Hs.297814 NM_153343 ENSG00000164303 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding chrX-3737 chrX 120560326 120560536 + 5.30 0.000 promoter-TSS (NM_001369145) promoter-TSS (NM_001369145) 531 NM_001079872 8450 Hs.102914 NM_003588 ENSG00000158290 CUL4B CUL-4B|MRXHF2|MRXS15|MRXSC|SFM2 cullin 4B protein-coding chr19-4204 chr19 45981360 45981570 + 5.30 0.000 Intergenic MIR3|SINE|MIR -7600 NM_002516 4858 Hs.375439 NM_002516 ENSG00000104967 NOVA2 ANOVA|NOVA3 NOVA alternative splicing regulator 2 protein-coding chr11-9206 chr11 37669854 37670064 + 5.30 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -268642 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr16-5683 chr16 72262674 72262884 + 5.30 0.000 Intergenic Intergenic -90329 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr2-6396 chr2 125679609 125679819 + 5.30 0.000 Intergenic L1PB1|LINE|L1 438271 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr18-3552 chr18 76845114 76845324 + 5.30 0.000 intron (NM_007345, intron 1 of 30) intron (NM_007345, intron 1 of 30) 21059 NM_007345 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr1-15981 chr1 195468711 195468921 + 5.30 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 619899 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr11-8558 chr11 133260180 133260390 + 5.30 0.000 intron (NM_001012393, intron 1 of 7) L2a|LINE|L2 272216 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr2-6381 chr2 111972905 111973115 + 5.30 0.000 intron (NM_006343, intron 6 of 18) intron (NM_006343, intron 6 of 18) 74403 NM_006343 10461 Hs.306178 NM_006343 ENSG00000153208 MERTK MER|RP38|Tyro12|c-Eyk|c-mer MER proto-oncogene, tyrosine kinase protein-coding chr5-8771 chr5 148142534 148142744 + 5.30 0.000 Intergenic Intergenic -25907 NM_001001325 408187 Hs.553815 NM_001001325 ENSG00000196800 SPINK14 SPINK5L2 serine peptidase inhibitor, Kazal type 14 (putative) protein-coding chr19-7052 chr19 51828896 51829106 + 5.30 0.000 intron (NR_163433, intron 9 of 11) intron (NR_163433, intron 9 of 11) 33844 NM_002030 2359 Hs.445466 NM_002030 ENSG00000187474 FPR3 FML2_HUMAN|FMLP-R-II|FMLPY|FPRH1|FPRH2|FPRL2|RMLP-R-I formyl peptide receptor 3 protein-coding chr12-4406 chr12 6708925 6709135 + 5.30 0.000 Intergenic LTR12C|LTR|ERV1 -8215 NM_001244014 196500 Hs.44067 NM_153685 ENSG00000139200 PIANP C12orf53|LEDA1|PANP|leda-1 PILR alpha associated neural protein protein-coding chr12-6383 chr12 68429184 68429394 + 5.30 0.000 Intergenic Intergenic 22195 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr4-5827 chr4 101756169 101756379 + 5.30 0.000 Intergenic Intergenic -34333 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr8-5499 chr8 55422904 55423114 + 5.30 0.000 intron (NM_052898, intron 2 of 2) intron (NM_052898, intron 2 of 2) 32312 NR_027765 100133234 Hs.729852 NR_027765 ENSG00000248522 SBF1P1 - SET binding factor 1 pseudogene 1 pseudo chr4-8367 chr4 148389017 148389227 + 5.30 0.000 intron (NM_000901, intron 2 of 8) intron (NM_000901, intron 2 of 8) 53292 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr10-6601 chr10 88327778 88327988 + 5.30 0.000 intron (NM_018363, intron 5 of 6) AluSx|SINE|Alu 255435 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr19-5932 chr19 50309891 50310101 + 5.30 0.000 3' UTR (NM_001145809, exon 43 of 43) 3' UTR (NM_001145809, exon 43 of 43) 19381 NM_004977 3748 Hs.467146 NM_004977 ENSG00000131398 KCNC3 KSHIIID|KV3.3|SCA13 potassium voltage-gated channel subfamily C member 3 protein-coding chr1-13647 chr1 10870123 10870333 + 5.30 0.000 Intergenic Intergenic -73582 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr12-3781 chr12 53861083 53861293 + 5.30 0.000 Intergenic Intergenic -77643 NM_017410 3229 Hs.118608 NM_017410 ENSG00000123364 HOXC13 ECTD9|HOX3|HOX3G homeobox C13 protein-coding chrX-4982 chrX 116806748 116806958 + 5.30 0.000 Intergenic L1MA2|LINE|L1 11007 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr8-3938 chr8 43179334 43179544 + 5.30 0.000 intron (NM_152419, intron 10 of 17) SVA_E|Retroposon|SVA 38975 NM_001363228 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr10-6445 chr10 27979492 27979702 + 5.30 0.000 intron (NM_018076, intron 7 of 19) L1MB4|LINE|L1 2274 NM_001290021 55130 Hs.127530 NM_018076 ENSG00000169126 ARMC4 CILD23 armadillo repeat containing 4 protein-coding chr8-5185 chr8 101988986 101989196 + 5.30 0.000 intron (NR_126152, intron 2 of 4) intron (NR_126152, intron 2 of 4) 4659 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr2-10814 chr2 50541701 50541911 + 5.30 0.000 intron (NM_001330093, intron 9 of 22) MER112|DNA|hAT-Charlie 154456 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA chr3-6527 chr3 116463188 116463398 + 5.30 0.000 Intergenic Intergenic -17806 NM_002338 4045 Hs.26409 NM_002338 ENSG00000185565 LSAMP IGLON3|LAMP limbic system associated membrane protein protein-coding chr6-7256 chr6 42259488 42259698 + 5.30 0.000 exon (NM_033502, exon 9 of 18) exon (NM_033502, exon 9 of 18) -41732 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr17-7259 chr17 2528147 2528357 + 5.30 0.000 Intergenic Intergenic -16364 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr5-6295 chr5 117067496 117067706 + 5.30 0.000 Intergenic Intergenic -305392 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr11-8744 chr11 8363224 8363434 + 5.30 0.000 Intergenic L1ME3|LINE|L1 -94542 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding KI270736.1-16 KI270736.1 107553 107763 + 5.30 0.000 NA NA NA NA chr12-5833 chr12 38939645 38939855 + 5.30 0.000 Intergenic L1ME3G|LINE|L1 -34159 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr9-8145 chr9 102642715 102642925 + 5.30 0.000 intron (NR_103830, intron 3 of 4) MER74A|LTR|ERVL 123183 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA chrX-5106 chrX 128313398 128313608 + 5.30 0.000 Intergenic Intergenic -261100 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr6-7255 chr6 42188629 42188839 + 5.30 0.000 intron (NM_002098, intron 1 of 3) intron (NM_002098, intron 1 of 3) 6222 NM_002098 2979 Hs.446529 NM_002098 ENSG00000112599 GUCA1B GCAP 2|GCAP2|GUCA2|RP48 guanylate cyclase activator 1B protein-coding chr6-6373 chr6 71082595 71082805 + 5.30 0.000 Intergenic Intergenic -125640 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr6-7973 chr6 113628514 113628724 + 5.30 0.000 intron (NR_125844, intron 1 of 2) intron (NR_125844, intron 1 of 2) 21456 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chrX-4384 chrX 50779603 50779813 + 5.30 0.000 intron (NR_027121, intron 1 of 9) intron (NR_027121, intron 1 of 9) 34336 NM_020717 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding chr19-6784 chr19 41133298 41133508 + 5.30 0.000 Intergenic Intergenic 18971 NR_135528 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr5-7912 chr5 77196120 77196330 + 5.30 0.000 intron (NM_001349752, intron 1 of 21) L1MB5|LINE|L1 -13668 NM_001349753 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr5-7883 chr5 74434208 74434418 + 5.30 0.000 intron (NR_126354, intron 2 of 2) intron (NR_126354, intron 2 of 2) 102663 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA chr10-7140 chr10 101131883 101132093 + 5.30 0.000 promoter-TSS (NR_130722) promoter-TSS (NR_130722) 688 NM_005521 3195 Hs.89583 NM_005521 ENSG00000107807 TLX1 HOX11|TCL3 T cell leukemia homeobox 1 protein-coding chr1-12155 chr1 178932055 178932265 + 5.30 0.000 Intergenic Intergenic -61083 NM_004673 9068 Hs.591474 NM_004673 ENSG00000116194 ANGPTL1 ANG3|ANGPT3|ARP1|AngY|UNQ162|dJ595C2.2 angiopoietin like 1 protein-coding chr20-4391 chr20 58092855 58093065 + 5.30 0.000 Intergenic G-rich|Low_complexity|Low_complexity -57942 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr22-1483 chr22 27800418 27800628 + 5.30 0.000 exon (NM_002430, exon 1 of 2) exon (NM_002430, exon 1 of 2) 1233 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr14-4467 chr14 34700918 34701128 + 5.30 0.000 Intergenic Intergenic 12794 NM_021914 1073 Hs.180141 NM_021914 ENSG00000165410 CFL2 NEM7 cofilin 2 protein-coding chr1-12767 chr1 73847603 73847813 + 5.30 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 173029 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA chr7-7004 chr7 122637901 122638111 + 5.30 0.000 intron (NM_001167940, intron 3 of 29) L1PA16|LINE|L1 61111 NM_139175 168433 Hs.126730 NM_139175 ENSG00000188050 RNF133 - ring finger protein 133 protein-coding chrX-4692 chrX 85890072 85890282 + 5.30 0.000 intron (NM_001320959, intron 12 of 14) L1PA16|LINE|L1 13530 NR_029848 494323 NR_029848 ENSG00000199051 MIR361 MIRN361|hsa-mir-361|mir-361 microRNA 361 ncRNA chr17-6915 chr17 39184678 39184888 + 5.30 0.000 intron (NM_199248, intron 8 of 12) intron (NM_199248, intron 8 of 12) 12886 NM_000723 782 Hs.635 NM_000723 ENSG00000067191 CACNB1 CAB1|CACNLB1|CCHLB1 calcium voltage-gated channel auxiliary subunit beta 1 protein-coding chr11-10472 chr11 117831640 117831850 + 5.30 0.000 intron (NM_001204268, intron 6 of 10) intron (NM_001204268, intron 6 of 10) -3656 NM_021603 486 Hs.731865 NM_001680 ENSG00000137731 FXYD2 ATP1G1|HOMG2 FXYD domain containing ion transport regulator 2 protein-coding chr20-3819 chr20 23770930 23771140 + 5.30 0.000 Intergenic Intergenic -20098 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr7-7580 chr7 124162136 124162346 + 5.30 0.000 Intergenic L1PA17|LINE|L1 -129174 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr3-4554 chr3 141770911 141771121 + 5.30 0.000 Intergenic AluJb|SINE|Alu -7185 NM_139209 131890 Hs.680654 NM_139209 ENSG00000114124 GRK7 GPRK7 G protein-coupled receptor kinase 7 protein-coding chr5-5121 chr5 102583249 102583459 + 5.30 0.000 intron (NR_047462, intron 1 of 1) intron (NR_047462, intron 1 of 1) 1986 NR_047462 100861468 Hs.519483 NR_047462 ENSG00000250958 LINC00492 - long intergenic non-protein coding RNA 492 ncRNA chr5-6236 chr5 84543417 84543627 + 5.30 0.000 Intergenic Intergenic -158642 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr13-3807 chr13 46135997 46136207 + 5.30 0.000 intron (NM_002298, intron 13 of 15) (AC)n|Simple_repeat|Simple_repeat -31026 NM_001278541 1361 Hs.512937 NM_001872 ENSG00000080618 CPB2 CPU|PCPB|TAFI carboxypeptidase B2 protein-coding chr6-8231 chr6 136548857 136549067 + 5.30 0.000 intron (NM_001198617, intron 1 of 15) intron (NM_001198617, intron 1 of 15) 1857 NM_003980 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr5-8635 chr5 139774749 139774959 + 5.30 0.000 Intergenic Intergenic -20954 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr11-7585 chr11 35500007 35500217 + 5.30 0.000 intron (NM_015430, intron 1 of 11) MLT1D|LTR|ERVL-MaLR 25504 NM_015430 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr16-6142 chr16 20771046 20771256 + 5.30 0.000 intron (NM_005622, intron 2 of 13) AluSz6|SINE|Alu 7137 NM_005622 6296 Hs.706754 NM_005622 ENSG00000005187 ACSM3 SA|SAH acyl-CoA synthetase medium chain family member 3 protein-coding chr9-5173 chr9 68801541 68801751 + 5.30 0.000 intron (NM_003558, intron 2 of 15) intron (NM_003558, intron 2 of 15) 21581 NM_138333 116224 Hs.655572 NM_138333 ENSG00000187866 FAM122A C9orf42 family with sequence similarity 122A protein-coding chr8-2452 chr8 121322688 121322898 + 5.30 0.000 Intergenic L1M5|LINE|L1 -316553 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr2-10560 chr2 239371393 239371603 + 5.30 0.000 intron (NM_006037, intron 1 of 26) (CACA)n|Simple_repeat|Simple_repeat -19694 NR_039948 100616360 NR_039948 ENSG00000264292 MIR2467 mir-2467 microRNA 2467 ncRNA chr11-8126 chr11 46237178 46237388 + 5.30 0.000 Intergenic L2b|LINE|L2 -40379 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr2-9618 chr2 3588530 3588740 + 5.30 0.000 Intergenic L1MD1|LINE|L1 -6197 NM_001255983 78989 Hs.32603 NM_024027 ENSG00000118004 COLEC11 3MC2|CL-K1-I|CL-K1-II|CL-K1-IIa|CL-K1-IIb|CLK1 collectin subfamily member 11 protein-coding chr2-14501 chr2 227393546 227393756 + 5.30 0.000 Intergenic Intergenic -14345 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr20-3116 chr20 32176099 32176309 + 5.30 0.000 Intergenic SVA_F|Retroposon|SVA 14156 NR_002781 128854 Hs.647447 NR_002781 ENSG00000235217 TSPY26P TSPYL3|bA392M18.1 testis specific protein Y-linked 26, pseudogene pseudo chr7-9080 chr7 105137039 105137249 + 5.30 0.000 intron (NM_182692, intron 11 of 15) L2a|LINE|L2 122939 NM_182931 55904 Hs.592262 NM_018682 ENSG00000005483 KMT2E HDCMC04P|MLL5|NKp44L lysine methyltransferase 2E protein-coding chr15-4846 chr15 74628378 74628588 + 5.30 0.000 intron (NM_001130028, intron 10 of 12) intron (NM_001130028, intron 10 of 12) 13489 NM_001130028 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr18-727 chr18 41096426 41096636 + 5.30 0.000 Intergenic Intergenic 424146 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr6-8124 chr6 127630824 127631034 + 5.30 0.000 Intergenic HAL1|LINE|L1 53755 NM_001010905 352999 Hs.226268 NM_001010905 ENSG00000184530 C6orf58 LEG1 chromosome 6 open reading frame 58 protein-coding chr7-6496 chr7 10498950 10499160 + 5.30 0.000 intron (NR_147499, intron 2 of 2) L1PA10|LINE|L1 -203621 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr12-5507 chr12 128507294 128507504 + 5.30 0.000 intron (NM_001136103, intron 2 of 8) (T)n|Simple_repeat|Simple_repeat 213307 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr11-6279 chr11 59606057 59606267 + 5.30 0.000 intron (NM_002556, intron 3 of 13) L2b|LINE|L2 9612 NM_002556 5007 Hs.597091 NM_002556 ENSG00000110048 OSBP OSBP1 oxysterol binding protein protein-coding chr6-5927 chr6 65097946 65098156 + 5.30 0.000 intron (NM_001292009, intron 12 of 43) intron (NM_001292009, intron 12 of 43) -203367 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr15-3679 chr15 40239375 40239585 + 5.30 0.000 promoter-TSS (NM_020168) promoter-TSS (NM_020168) -317 NM_020168 56924 Hs.732375 NM_020168 ENSG00000137843 PAK6 PAK5 p21 (RAC1) activated kinase 6 protein-coding chr18-3120 chr18 37359676 37359886 + 5.30 0.000 intron (NM_001353724, intron 2 of 12) AluSc5|SINE|Alu 85321 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr13-1760 chr13 111942564 111942774 + 5.30 0.000 Intergenic MER20|DNA|hAT-Charlie -29641 NR_120392 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr9-8957 chr9 137833177 137833387 + 5.30 0.000 intron (NM_001354263, intron 25 of 26) CpG -5137 NR_030333 693187 NR_030333 ENSG00000207693 MIR602 MIRN602|hsa-mir-602 microRNA 602 ncRNA chrX-1543 chrX 42370995 42371205 + 5.30 0.000 Intergenic L1MA2|LINE|L1 407063 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr9-6738 chr9 14532806 14533016 + 5.30 0.000 promoter-TSS (NM_001369459) promoter-TSS (NM_001369459) -834 NM_001369468 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr6-6222 chr6 17964826 17965036 + 5.30 0.000 intron (NM_001243423, intron 2 of 2) AluSx1|SINE|Alu 22704 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr9-7002 chr9 114074356 114074566 + 5.30 0.000 intron (NM_001633, intron 3 of 9) intron (NM_001633, intron 3 of 9) 3839 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chrX-4918 chrX 109512930 109513140 + 5.30 0.000 Intergenic L1PB1|LINE|L1 -22789 NM_018698 55916 Hs.25010 NM_018698 ENSG00000101888 NXT2 P15-2 nuclear transport factor 2 like export factor 2 protein-coding chr6-6035 chr6 124003074 124003284 + 5.30 0.000 intron (NM_001040214, intron 1 of 6) intron (NM_001040214, intron 1 of 6) 199314 NM_001040214 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr11-7733 chr11 73193942 73194152 + 5.30 0.000 Intergenic Intergenic -24234 NM_002564 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chrX-3953 chrX 11406017 11406227 + 5.30 0.000 intron (NR_109776, intron 1 of 14) AluJb|SINE|Alu 21696 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr11-10467 chr11 117717229 117717439 + 5.30 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 79882 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr5-8143 chr5 99985921 99986131 + 5.30 0.000 Intergenic HERV9NC-int|LTR|ERV1 402228 NR_027503 100133050 Hs.534796 NR_027503 LOC100133050 - glucuronidase beta pseudogene pseudo chr22-2110 chr22 30132428 30132638 + 5.30 0.000 intron (NM_001329457, intron 11 of 11) AluSx|SINE|Alu 52069 NM_001329457 150280 Hs.120391 NM_152510 ENSG00000176635 HORMAD2 CT46.2 HORMA domain containing 2 protein-coding chr1-11614 chr1 231617589 231617799 + 5.30 0.000 intron (NR_028393, intron 5 of 15) Charlie18a|DNA|hAT-Charlie -5604 NR_034037 100287814 Hs.25555 NR_034037 ENSG00000229228 LINC00582 - long intergenic non-protein coding RNA 582 ncRNA chr6-8035 chr6 119609905 119610115 + 5.30 0.000 intron (NR_134600, intron 2 of 3) intron (NR_134600, intron 2 of 3) 60202 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr8-7361 chr8 136273222 136273432 + 5.30 0.000 Intergenic AluY|SINE|Alu -257471 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr12-3665 chr12 120705678 120705888 + 5.30 0.000 Intergenic Intergenic -4675 NM_001080533 84747 Hs.127610 NM_032661 ENSG00000175970 UNC119B POC7B unc-119 lipid binding chaperone B protein-coding chr4-6342 chr4 95256498 95256708 + 5.30 0.000 intron (NM_003728, intron 4 of 15) L2|LINE|L2 165112 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr2-13657 chr2 161764181 161764391 + 5.30 0.000 intron (NM_001354443, intron 2 of 25) L1MC5a|LINE|L1 139870 NM_001354455 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr20-3649 chr20 9603351 9603561 + 5.30 0.000 intron (NM_020341, intron 4 of 10) intron (NM_020341, intron 4 of 10) -88458 NR_109957 101929329 Hs.589878 NR_109957 ENSG00000225988 LAMP5-AS1 - LAMP5 antisense RNA 1 ncRNA chr7-8092 chr7 25437891 25438101 + 5.30 0.000 Intergenic Intergenic -209510 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr11-10070 chr11 84909800 84910010 + 5.30 0.000 intron (NM_001351274, intron 5 of 26) intron (NM_001351274, intron 5 of 26) 13516 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr4-3458 chr4 105215812 105216022 + 5.30 0.000 intron (NM_001127208, intron 2 of 10) intron (NM_001127208, intron 2 of 10) 69232 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr20-4400 chr20 58695235 58695445 + 5.30 0.000 intron (NM_024663, intron 3 of 11) MIRc|SINE|MIR 2540 NM_024663 79716 Hs.654868 NM_024663 ENSG00000215440 NPEPL1 bA261P9.2 aminopeptidase like 1 protein-coding chr5-9134 chr5 175626752 175626962 + 5.30 0.000 Intergenic Intergenic -31214 NR_160284 3274 Hs.247885 NM_022304 ENSG00000113749 HRH2 H2R|HH2R histamine receptor H2 protein-coding chr3-10669 chr3 150315704 150315914 + 5.30 0.000 intron (NR_110187, intron 1 of 1) intron (NR_110187, intron 1 of 1) 7938 NR_110187 101928022 Hs.555199 NR_110186 LINC01214 - long intergenic non-protein coding RNA 1214 ncRNA chr14-3857 chr14 78306276 78306486 + 5.30 0.000 intron (NR_073547, intron 4 of 20) intron (NR_073547, intron 4 of 20) -97338 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr8-6880 chr8 100885514 100885724 + 5.30 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 64952 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr5-7237 chr5 9816649 9816859 + 5.30 0.000 intron (NR_027112, intron 4 of 12) intron (NR_027112, intron 4 of 12) -37623 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA chrX-4028 chrX 17492853 17493063 + 5.30 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -35477 NR_135631 101928389 Hs.686933 NR_135631 ENSG00000235834 LOC101928389 - uncharacterized LOC101928389 ncRNA chr20-2088 chr20 20623361 20623571 + 5.30 0.000 intron (NM_020343, intron 10 of 39) L1MEg|LINE|L1 89178 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr1-13241 chr1 219247245 219247455 + 5.30 0.000 Intergenic Intergenic 72381 NM_001300772 127018 Hs.657617 NM_138794 ENSG00000143353 LYPLAL1 Q96AV0 lysophospholipase like 1 protein-coding chrX-3600 chrX 82090998 82091208 + 5.30 0.000 Intergenic MER50B|LTR|ERV1 889001 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr1-14591 chr1 53707689 53707899 + 5.30 0.000 intron (NM_001367484, intron 2 of 10) AluJo|SINE|Alu 26410 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr1-8258 chr1 34640349 34640559 + 5.30 0.000 Intergenic Intergenic 29240 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr3-8278 chr3 53489434 53489644 + 5.30 0.000 Intergenic Intergenic -5072 NM_001128840 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr2-6872 chr2 77965971 77966181 + 5.30 0.000 intron (NR_110288, intron 1 of 3) HERVH-int|LTR|ERV1 -11050 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA chr4-3352 chr4 4111960 4112170 + 5.30 0.000 Intergenic AluJo|SINE|Alu 114829 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr8-6947 chr8 105067332 105067542 + 5.30 0.000 Intergenic Tigger4b|DNA|TcMar-Tigger -251001 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr2-13627 chr2 159740603 159740813 + 5.30 0.000 intron (NM_001282807, intron 1 of 8) intron (NM_001282807, intron 1 of 8) 6744 NM_001282807 64844 Hs.529272 NM_022826 ENSG00000136536 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane associated ring-CH-type finger 7 protein-coding chr12-3513 chr12 126438821 126439031 + 5.30 0.000 intron (NR_147498, intron 2 of 3) MLT1G3|LTR|ERVL-MaLR -3555 NR_130748 100128554 Hs.408255 NR_015398 ENSG00000214043 LINC02347 - long intergenic non-protein coding RNA 2347 ncRNA chr2-5965 chr2 51032350 51032560 + 5.30 0.000 promoter-TSS (NM_001330081) promoter-TSS (NM_001330081) 81 NM_001330093 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr3-10323 chr3 126976115 126976325 + 5.30 0.000 Intergenic Intergenic -12374 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr10-5551 chr10 87414285 87414495 + 5.30 0.000 Intergenic L1PA13|LINE|L1 -6690 NR_046091 728218 Hs.713428 NR_046091 FAM245A LINC00864 family with sequence similarity 245 member A ncRNA chr8-7472 chr8 142339527 142339737 + 5.30 0.000 intron (NM_001291931, intron 2 of 10) intron (NM_001291931, intron 2 of 10) 63550 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr7-6330 chr7 144754170 144754380 + 5.30 0.000 intron (NM_001042482, intron 3 of 7) L1P2|LINE|L1 -15377 NM_001350884 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chrX-4012 chrX 16679495 16679705 + 5.30 0.000 intron (NM_019857, intron 9 of 18) MLT1A0|LTR|ERVL-MaLR 29442 NM_004057 795 Hs.639 NM_004057 ENSG00000169906 S100G CABP|CABP1|CABP9K|CALB3 S100 calcium binding protein G protein-coding chr12-4917 chr12 67697850 67698060 + 5.30 0.000 Intergenic Intergenic 31520 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr9-7711 chr9 72894478 72894688 + 5.30 0.000 Intergenic Intergenic -20474 NR_121181 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr7-9272 chr7 124480579 124480789 + 5.30 0.000 Intergenic Intergenic -128588 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chrX-3425 chrX 15919764 15919974 + 5.30 0.000 Intergenic L1ME3F|LINE|L1 -65056 NM_001272071 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr8-4940 chr8 109008892 109009102 + 5.30 0.000 Intergenic LTR33|LTR|ERVL -77631 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr8-4849 chr8 35708911 35709121 + 5.30 0.000 non-coding (NR_125819, exon 1 of 5) non-coding (NR_125819, exon 1 of 5) 1304 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr15-1602 chr15 78750887 78751097 + 5.30 0.000 Intergenic Intergenic -1045 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr3-10321 chr3 126952336 126952546 + 5.30 0.000 intron (NM_032343, intron 6 of 7) intron (NM_032343, intron 6 of 7) -36153 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr2-12669 chr2 74583427 74583637 + 5.30 0.000 intron (NM_001321739, intron 4 of 10) intron (NM_001321739, intron 4 of 10) 29372 NM_001381 1796 Hs.103854 NM_001381 ENSG00000115325 DOK1 P62DOK|pp62 docking protein 1 protein-coding chr9-8655 chr9 129846522 129846732 + 5.30 0.000 intron (NM_001008563, intron 1 of 25) AluSq2|SINE|Alu 11169 NM_001110303 10868 Hs.5452 NM_006676 ENSG00000136878 USP20 LSFR3A|VDU2|hVDU2 ubiquitin specific peptidase 20 protein-coding chr10-8152 chr10 70844200 70844410 + 5.30 0.000 intron (NM_003901, intron 2 of 14) intron (NM_003901, intron 2 of 14) 28357 NM_003901 8879 Hs.499984 NM_003901 ENSG00000166224 SGPL1 NPHS14|S1PL|SPL sphingosine-1-phosphate lyase 1 protein-coding chr10-7651 chr10 25667570 25667780 + 5.30 0.000 intron (NR_108067, intron 2 of 4) L1PA10|LINE|L1 15963 NR_108067 101929052 Hs.128298 NR_108067 ENSG00000280809 LINC00836 - long intergenic non-protein coding RNA 836 ncRNA chr18-2671 chr18 53219708 53219918 + 5.30 0.000 intron (NM_005215, intron 12 of 28) intron (NM_005215, intron 12 of 28) -17288 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr4-5704 chr4 31481010 31481220 + 5.30 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -25429 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr3-8675 chr3 181550152 181550362 + 5.30 0.000 intron (NR_075091, intron 3 of 7) intron (NR_075091, intron 3 of 7) -60077 NR_004053 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr3-4502 chr3 74614713 74614923 + 5.30 0.000 Intergenic CpG -93678 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr11-6712 chr11 79530001 79530211 + 5.30 0.000 Intergenic L2|LINE|L2 -89076 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr6-6884 chr6 11732165 11732375 + 5.30 0.000 intron (NM_032744, intron 4 of 5) intron (NM_032744, intron 4 of 5) 46777 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr3-8185 chr3 39568605 39568815 + 5.30 0.000 Intergenic Intergenic 66644 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chrX-5114 chrX 128651096 128651306 + 5.30 0.000 Intergenic Intergenic -598798 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr1-8611 chr1 190616823 190617033 + 5.30 0.000 Intergenic THE1B|LTR|ERVL-MaLR -7962 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA chr9-3597 chr9 83405964 83406174 + 5.30 0.000 intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 61673 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr7-9674 chr7 152593714 152593924 + 5.30 0.000 Intergenic AluJb|SINE|Alu 82322 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr21-1213 chr21 44949865 44950075 + 5.30 0.000 intron (NM_001316986, intron 2 of 4) intron (NM_001316986, intron 2 of 4) 9941 NM_058190 85395 Hs.410830 NM_058190 ENSG00000160256 FAM207A C21orf70|PRED56 family with sequence similarity 207 member A protein-coding chr4-8026 chr4 118753372 118753582 + 5.30 0.000 intron (NM_014822, intron 11 of 22) intron (NM_014822, intron 11 of 22) 68085 NM_020961 57721 Hs.596872 NM_020961 ENSG00000145388 METTL14 hMETTL14 methyltransferase like 14 protein-coding chr1-10982 chr1 216102863 216103073 + 5.30 0.000 intron (NM_206933, intron 21 of 71) L1ME3A|LINE|L1 30503 NR_125992 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr4-5585 chr4 174726194 174726404 + 5.30 0.000 intron (NM_006529, intron 4 of 9) L1MDa|LINE|L1 102948 NM_006529 8001 Hs.413099 NM_006529 ENSG00000145451 GLRA3 - glycine receptor alpha 3 protein-coding chr5-8888 chr5 155307324 155307534 + 5.30 0.000 Intergenic Intergenic 293674 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr2-13699 chr2 165791930 165792140 + 5.30 0.000 intron (NM_004482, intron 1 of 10) intron (NM_004482, intron 1 of 10) 2212 NM_004482 2591 Hs.170986 NM_004482 ENSG00000115339 GALNT3 GalNAc-T3|HFTC|HFTC1|HHS polypeptide N-acetylgalactosaminyltransferase 3 protein-coding chr1-16085 chr1 203162824 203163034 + 5.30 0.000 intron (NM_001365066, intron 2 of 2) intron (NM_001365066, intron 2 of 2) 12897 NM_004997 4608 Hs.927 NM_004997 ENSG00000133055 MYBPH - myosin binding protein H protein-coding chrX-5180 chrX 133319255 133319465 + 5.30 0.000 intron (NM_001448, intron 3 of 8) AluJo|SINE|Alu 96129 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr14-5100 chr14 87893039 87893249 + 5.30 0.000 Intergenic MIR|SINE|MIR 100038 NM_000153 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr16-4482 chr16 56918016 56918226 + 5.30 0.000 Intergenic Intergenic 13857 NR_106923 102466752 NR_106923 ENSG00000283471 MIR6863 hsa-mir-6863 microRNA 6863 ncRNA chr2-11146 chr2 142776155 142776365 + 5.30 0.000 Intergenic L1MA2|LINE|L1 -101404 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr7-6408 chr7 155132413 155132623 + 5.30 0.000 Intergenic Intergenic -60961 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chr10-8597 chr10 96674657 96674867 + 5.30 0.000 intron (NM_152309, intron 2 of 16) intron (NM_152309, intron 2 of 16) 45752 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr11-10384 chr11 112957673 112957883 + 5.30 0.000 Intergenic Intergenic -3642 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding chr1-14454 chr1 46846472 46846682 + 5.30 0.000 intron (NR_002788, intron 9 of 11) L1PA5|LINE|L1 47531 NM_001099772 1580 Hs.436317 NM_000779 ENSG00000142973 CYP4B1 CYPIVB1|P-450HP cytochrome P450 family 4 subfamily B member 1 protein-coding chr16-6535 chr16 63530494 63530704 + 5.30 0.000 Intergenic Intergenic -1494161 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr17-6235 chr17 19788399 19788609 + 5.30 0.000 intron (NM_014683, intron 20 of 26) L1M1|LINE|L1 -40206 NM_000691 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr7-5720 chr7 71140321 71140531 + 5.30 0.000 intron (NM_022479, intron 1 of 10) intron (NM_022479, intron 1 of 10) 8282 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr4-3319 chr4 186137094 186137304 + 5.30 0.000 intron (NM_001367768, intron 1 of 13) intron (NM_001367768, intron 1 of 13) -7088 NM_001006655 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr8-5610 chr8 96345451 96345661 + 5.30 0.000 Intergenic Intergenic 41092 NR_125829 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr6-6449 chr6 101393880 101394090 + 5.30 0.000 Intergenic CpG -5000 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr3-11158 chr3 189508925 189509135 + 5.30 0.000 Intergenic Intergenic -87716 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr13-3941 chr13 60299709 60299919 + 5.30 0.000 Intergenic AluSx1|SINE|Alu -31710 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr7-7317 chr7 44919642 44919852 + 5.30 0.000 Intergenic Intergenic -34217 NM_033224 5814 Hs.349150 NM_033224 ENSG00000146676 PURB PURBETA purine rich element binding protein B protein-coding chr1-11377 chr1 43677122 43677332 + 5.30 0.000 intron (NM_014663, intron 11 of 21) AluSx1|SINE|Alu 27078 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr13-4006 chr13 70860167 70860377 + 5.30 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -154869 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr12-7607 chr12 79056438 79056648 + 5.30 0.000 intron (NM_005639, intron 3 of 10) intron (NM_005639, intron 3 of 10) 10851 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr10-8016 chr10 62060139 62060349 + 5.30 0.000 intron (NM_001244638, intron 4 of 6) intron (NM_001244638, intron 4 of 6) 10887 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr5-7963 chr5 81721500 81721710 + 5.30 0.000 intron (NM_012446, intron 1 of 16) (AAAACA)n|Simple_repeat|Simple_repeat 29648 NM_001256736 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr19-5115 chr19 57887386 57887596 + 5.30 0.000 intron (NM_001144989, intron 1 of 2) LTR62|LTR|ERVL 1546 NM_001144989 730051 Hs.634143 NM_001144989 ENSG00000204514 ZNF814 - zinc finger protein 814 protein-coding chr22-3167 chr22 29387938 29388148 + 5.30 0.000 intron (NM_001166019, intron 1 of 20) intron (NM_001166019, intron 1 of 20) 527 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr8-4922 chr8 99202131 99202341 + 5.30 0.000 intron (NM_017890, intron 17 of 61) intron (NM_017890, intron 17 of 61) 188970 NM_015243 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr2-12440 chr2 58337945 58338155 + 5.30 0.000 Intergenic Intergenic 62173 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA chrX-4951 chrX 112636561 112636771 + 5.30 0.000 intron (NM_178175, intron 3 of 3) intron (NM_178175, intron 3 of 3) 43272 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr15-2753 chr15 25713691 25713901 + 5.30 0.000 exon (NM_024490, exon 10 of 21) exon (NM_024490, exon 10 of 21) 135029 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr8-6248 chr8 40773194 40773404 + 5.30 0.000 intron (NM_024645, intron 2 of 6) intron (NM_024645, intron 2 of 6) 124527 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr3-6512 chr3 113702059 113702269 + 5.30 0.000 Intergenic AluSg|SINE|Alu -5518 NR_111981 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr14-3818 chr14 70789170 70789380 + 5.30 0.000 intron (NM_033141, intron 2 of 12) intron (NM_033141, intron 2 of 12) -5823 NM_001284231 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding chr6-3662 chr6 143987291 143987501 + 5.30 0.000 intron (NM_001289040, intron 1 of 5) intron (NM_001289040, intron 1 of 5) 20863 NM_001317161 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr10-7816 chr10 43110164 43110374 + 5.30 0.000 intron (NM_020630, intron 6 of 18) intron (NM_020630, intron 6 of 18) 5537 NM_001355216 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr4-7053 chr4 29387814 29388024 + 5.30 0.000 Intergenic Intergenic 173627 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr18-2715 chr18 65934603 65934813 + 5.30 0.000 Intergenic Intergenic 183696 NM_001317214 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr17-6787 chr17 4318544 4318754 + 5.30 0.000 intron (NM_003342, intron 1 of 5) intron (NM_003342, intron 1 of 5) -46755 NR_110982 103021295 Hs.741319 NR_110982 LOC103021295 - uncharacterized LOC103021295 ncRNA chr17-8000 chr17 49509870 49510080 + 5.30 0.000 promoter-TSS (NR_106751) promoter-TSS (NR_106751) -842 NR_106751 102465141 NR_106751 ENSG00000277478 MIR6165 hsa-mir-6165 microRNA 6165 ncRNA chr5-7058 chr5 170422379 170422589 + 5.30 0.000 non-coding (NR_109899, exon 3 of 3) non-coding (NR_109899, exon 3 of 3) 32991 NR_109899 101928033 Hs.709167 NR_109899 ENSG00000253647 CTD-2270F17.1 - uncharacterized LOC101928033 ncRNA chr3-7827 chr3 105334540 105334750 + 5.30 0.000 Intergenic Intergenic -32068 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr1-7185 chr1 211655235 211655445 + 5.30 0.000 TTS (NR_131925) TTS (NR_131925) 15532 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr6-3658 chr6 142820317 142820527 + 5.30 0.000 intron (NM_006734, intron 2 of 9) intron (NM_006734, intron 2 of 9) 124754 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr20-1413 chr20 34025946 34026156 + 5.30 0.000 intron (NM_007367, intron 1 of 8) intron (NM_007367, intron 1 of 8) -23068 NR_039911 100616434 NR_039911 ENSG00000264616 MIR4755 mir-4755 microRNA 4755 ncRNA chr4-7708 chr4 89258682 89258892 + 5.30 0.000 intron (NM_198281, intron 1 of 1) MER34|LTR|ERV1 49013 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr4-5639 chr4 7584434 7584644 + 5.30 0.000 intron (NM_020777, intron 3 of 26) MIR3|SINE|MIR 124511 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr7-9592 chr7 148072532 148072742 + 5.30 0.000 intron (NM_014141, intron 14 of 22) intron (NM_014141, intron 14 of 22) 400958 NR_133930 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr11-9807 chr11 70603774 70603984 + 5.30 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) -27215 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA chr2-14601 chr2 232776638 232776848 + 5.30 0.000 promoter-TSS (NM_001172417) promoter-TSS (NM_001172417) -178 NM_001172416 3769 Hs.467338 NM_002242 ENSG00000115474 KCNJ13 KIR1.4|KIR7.1|LCA16|SVD potassium voltage-gated channel subfamily J member 13 protein-coding chr14-1978 chr14 44634440 44634650 + 5.30 0.000 Intergenic Intergenic 127136 NR_135257 105370473 Hs.180134 NR_135257 ENSG00000258747 LOC105370473 - uncharacterized LOC105370473 ncRNA chr3-7231 chr3 194736665 194736875 + 5.30 0.000 intron (NR_037891, intron 1 of 3) intron (NR_037891, intron 1 of 3) 28349 NR_037891 100507391 Hs.590099 NR_037891 ENSG00000237222 LINC01968 - long intergenic non-protein coding RNA 1968 ncRNA chr2-9918 chr2 235209973 235210183 + 5.30 0.000 Intergenic Intergenic 182343 NM_001371306 chr14-4171 chr14 79174965 79175175 + 5.30 0.000 intron (NR_073547, intron 14 of 20) AluY|SINE|Alu -24912 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr9-4186 chr9 32838217 32838427 + 5.30 0.000 Intergenic Intergenic 54782 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr9-4552 chr9 86111429 86111639 + 5.30 0.000 Intergenic AluSq2|SINE|Alu -11333 NM_177937 51280 Hs.494337 NM_016548 ENSG00000135052 GOLM1 C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 golgi membrane protein 1 protein-coding chrX-4592 chrX 72358510 72358720 + 5.30 0.000 intron (NR_051952, intron 8 of 9) MER44C|DNA|TcMar-Tigger -51458 NM_001144886 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr11-6020 chr11 25123428 25123638 + 5.30 0.000 Intergenic LTR33C|LTR|ERVL 626480 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr3-9056 chr3 24471829 24472039 + 5.30 0.000 intron (NM_001354709, intron 1 of 10) intron (NM_001354709, intron 1 of 10) -22153 NR_046244 644990 Hs.631912 NR_046244 THRB-AS1 - THRB antisense RNA 1 ncRNA chr5-6331 chr5 134028285 134028495 + 5.30 0.000 Intergenic AluSx1|SINE|Alu -23415 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr1-4198 chr1 69710215 69710425 + 5.30 0.000 intron (NM_001370785, intron 2 of 26) intron (NM_001370785, intron 2 of 26) 140979 NM_001366842 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr17-7888 chr17 43338994 43339204 + 5.30 0.000 Intergenic LTR13|LTR|ERVK -38868 NR_002716 6066 NR_002716 ENSG00000274585 RNU2-1 RNU2|U2 RNA, U2 small nuclear 1 snRNA chr15-4169 chr15 93123984 93124194 + 5.30 0.000 Intergenic MIRc|SINE|MIR -34878 NM_020211 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr2-11276 chr2 181206467 181206677 + 5.30 0.000 intron (NR_130784, intron 1 of 4) THE1C-int|LTR|ERVL-MaLR 82735 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA chr8-3124 chr8 59117924 59118134 + 5.30 0.000 intron (NM_014729, intron 1 of 8) CpG 1118 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr10-7194 chr10 111027939 111028149 + 5.30 0.000 Intergenic L1M1|LINE|L1 39118 NR_031614 100313921 NR_031614 ENSG00000221214 MIR548E MIRN548E|hsa-mir-548e microRNA 548e ncRNA chr6-6975 chr6 18466643 18466853 + 5.30 0.000 3' UTR (NM_182757, exon 8 of 8) 3' UTR (NM_182757, exon 8 of 8) -55999 NR_149116 105374956 Hs.561599 NR_149116 MIR548A1HG - MIR548A1 host gene ncRNA chr8-2785 chr8 120831526 120831736 + 5.30 0.000 Intergenic Intergenic -19585 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr7-8946 chr7 97325528 97325738 + 5.30 0.000 Intergenic LTR1F1|LTR|ERV1 209040 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr6-8329 chr6 146336397 146336607 + 5.30 0.000 intron (NM_001278065, intron 4 of 9) LTR16A1|LTR|ERVL -207331 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr7-6494 chr7 8164253 8164463 + 5.30 0.000 intron (NM_001350836, intron 7 of 14) L2b|LINE|L2 97694 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chrX-3087 chrX 132770349 132770559 + 5.30 0.000 intron (NM_001077188, intron 3 of 5) intron (NM_001077188, intron 3 of 5) 102812 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr9-8480 chr9 124063380 124063590 + 5.30 0.000 Intergenic Intergenic 51717 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr16-5840 chr16 958864 959074 + 5.30 0.000 intron (NM_001352017, intron 1 of 11) L1MC3|LINE|L1 12015 NM_001352021 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr7-9132 chr7 108430643 108430853 + 5.30 0.000 intron (NM_001371132, intron 1 of 30) L2c|LINE|L2 25649 NM_001193583 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr14-5356 chr14 103178994 103179204 + 5.30 0.000 Intergenic MER81|DNA|hAT-Blackjack 9929 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr1-7806 chr1 53501667 53501877 + 5.30 0.000 Intergenic Intergenic 42373 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr16-3813 chr16 51765153 51765363 + 5.30 0.000 intron (NR_110916, intron 1 of 2) intron (NR_110916, intron 1 of 2) 2739 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr11-9716 chr11 68099646 68099856 + 5.30 0.000 intron (NM_001277, intron 1 of 11) intron (NM_001277, intron 1 of 11) 21637 NM_001277 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr3-10555 chr3 141059358 141059568 + 5.30 0.000 intron (NM_080862, intron 1 of 2) MSTA|LTR|ERVL-MaLR 8116 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr8-5578 chr8 86414370 86414580 + 5.30 0.000 intron (NM_007013, intron 9 of 24) intron (NM_007013, intron 9 of 24) 71928 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr8-7217 chr8 126692010 126692220 + 5.30 0.000 Intergenic (TCCCT)n|Simple_repeat|Simple_repeat -133637 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr17-7277 chr17 3595328 3595538 + 5.30 0.000 intron (NM_080704, intron 2 of 16) intron (NM_080704, intron 2 of 16) 398 NM_080705 7442 Hs.579217 NM_018727 ENSG00000196689 TRPV1 VR1 transient receptor potential cation channel subfamily V member 1 protein-coding chr4-8723 chr4 183571989 183572199 + 5.30 0.000 Intergenic AluJb|SINE|Alu 66012 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr4-8298 chr4 143346409 143346619 + 5.30 0.000 intron (NM_207123, intron 1 of 10) intron (NM_207123, intron 1 of 10) 3054 NR_036091 100423017 NR_036091 ENSG00000265623 MIR3139 - microRNA 3139 ncRNA chr6-3861 chr6 43913968 43914178 + 5.30 0.000 intron (NR_024478, intron 1 of 1) intron (NR_024478, intron 1 of 1) 23045 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr17-2951 chr17 60551560 60551770 + 5.30 0.000 Intergenic SVA_F|Retroposon|SVA -12881 NR_126009 388406 Hs.368309 NR_126009 ENSG00000267772 LINC01999 - long intergenic non-protein coding RNA 1999 ncRNA chr5-6681 chr5 61926937 61927147 + 5.30 0.000 Intergenic Intergenic -191344 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr7-7197 chr7 14200628 14200838 + 5.30 0.000 intron (NM_001350717, intron 22 of 24) intron (NM_001350717, intron 22 of 24) -209308 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr15-2283 chr15 58787643 58787853 + 5.30 0.000 intron (NM_001040450, intron 1 of 8) AluY|SINE|Alu 16446 NM_001040450 54629 Hs.591122 NM_019092 ENSG00000128923 MINDY2 FAM63B MINDY lysine 48 deubiquitinase 2 protein-coding chr3-4145 chr3 123027667 123027877 + 5.30 0.000 promoter-TSS (NM_001031702) promoter-TSS (NM_001031702) -9 NM_001031702 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr3-7013 chr3 171101943 171102153 + 5.30 0.000 intron (NM_001161566, intron 18 of 29) intron (NM_001161566, intron 18 of 29) 4711 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr12-4991 chr12 78663019 78663229 + 5.30 0.000 Intergenic Intergenic -200858 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr9-6516 chr9 106136637 106136847 + 5.30 0.000 Intergenic LTR16E1|LTR|ERVL 442201 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr15-2408 chr15 65342303 65342513 + 5.30 0.000 intron (NM_004884, intron 2 of 13) MER3|DNA|hAT-Charlie 35594 NM_004884 9543 Hs.128292 NM_004884 ENSG00000174498 IGDCC3 HsT18880|PUNC immunoglobulin superfamily DCC subclass member 3 protein-coding chr5-6113 chr5 26775209 26775419 + 5.30 0.000 Intergenic MLT2A1|LTR|ERVL 263272 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr20-3319 chr20 17629818 17630028 + 5.30 0.000 exon (NM_004587, exon 9 of 25) exon (NM_004587, exon 9 of 25) 52319 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr11-10022 chr11 81850442 81850652 + 5.30 0.000 Intergenic Intergenic 40289 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr13-1652 chr13 67585165 67585375 + 5.30 0.000 Intergenic L1MA4A|LINE|L1 212883 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr16-6424 chr16 56343785 56343995 + 5.30 0.000 exon (NM_138736, exon 8 of 8) exon (NM_138736, exon 8 of 8) 81099 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr3-10432 chr3 131703177 131703387 + 5.30 0.000 intron (NM_130808, intron 3 of 15) intron (NM_130808, intron 3 of 15) -200311 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr11-8457 chr11 115763785 115763995 + 5.30 0.000 Intergenic Intergenic -3690 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr7-7289 chr7 38619790 38620000 + 5.30 0.000 intron (NM_001635, intron 1 of 20) intron (NM_001635, intron 1 of 20) 11478 NM_001635 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding chr11-9212 chr11 38296010 38296220 + 5.30 0.000 Intergenic LTR12C|LTR|ERV1 350241 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA chr4-7083 chr4 32057804 32058014 + 5.30 0.000 intron (NR_125936, intron 1 of 2) THE1C-int|LTR|ERVL-MaLR -35487 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA chr16-6098 chr16 12591188 12591398 + 5.30 0.000 Intergenic L1PA10|LINE|L1 -129028 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr9-7527 chr9 33850175 33850385 + 5.30 0.000 intron (NM_017811, intron 1 of 4) intron (NM_017811, intron 1 of 4) 33120 NM_017811 54926 Hs.643648 NM_017811 ENSG00000107341 UBE2R2 CDC34B|E2-CDC34B|UBC3B ubiquitin conjugating enzyme E2 R2 protein-coding chr12-2862 chr12 7345075 7345285 + 5.30 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 40848 NM_001080454 341392 Hs.450804 NM_001080454 ENSG00000215009 ACSM4 - acyl-CoA synthetase medium chain family member 4 protein-coding chr7-2878 chr7 121994697 121994907 + 5.30 0.000 intron (NM_001206839, intron 8 of 28) intron (NM_001206839, intron 8 of 28) 121641 NM_001369396 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr1-7575 chr1 211539869 211540079 + 5.30 0.000 Intergenic AluSx|SINE|Alu 39187 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr2-6946 chr2 113374985 113375195 + 5.30 0.000 Intergenic THE1A|LTR|ERVL-MaLR -62601 NM_001330342 150472 Hs.531330 NM_172003 ENSG00000136682 CBWD2 - COBW domain containing 2 protein-coding chr8-6883 chr8 100922493 100922703 + 5.30 0.000 intron (NM_001135700, intron 5 of 5) AluSg7|SINE|Alu 27973 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr11-5013 chr11 76365266 76365476 + 5.30 0.000 intron (NR_130898, intron 2 of 5) (GTTTT)n|Simple_repeat|Simple_repeat 15594 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr11-9233 chr11 41419818 41420028 + 5.30 0.000 intron (NM_001258419, intron 1 of 6) intron (NM_001258419, intron 1 of 6) 39713 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr22-2273 chr22 32364787 32364997 + 5.30 0.000 intron (NR_002596, intron 3 of 4) intron (NR_002596, intron 3 of 4) 6184 NR_001450 10737 Hs.274285 NR_001450 ENSG00000205853 RFPL3S NCRNA00005|RFPL3-AS|RFPL3-AS1|RFPL3ANT|RFPL3AS RFPL3 antisense ncRNA chr13-2582 chr13 71292941 71293151 + 5.30 0.000 Intergenic AluY|SINE|Alu 277905 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr8-3995 chr8 54035072 54035282 + 5.30 0.000 Intergenic L1MB5|LINE|L1 -12729 NR_109902 6917 Hs.491745 NM_006756 ENSG00000187735 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A1 protein-coding chrX-4551 chrX 69153460 69153670 + 5.30 0.000 Intergenic Intergenic 11888 NM_145119 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr19-5698 chr19 12825084 12825294 + 5.30 0.000 TTS (NM_031429) TTS (NM_031429) 5227 NM_001080997 83546 Hs.21162 NM_031429 ENSG00000132026 RTBDN - retbindin protein-coding chr11-6856 chr11 99406821 99407031 + 5.30 0.000 intron (NM_001243271, intron 2 of 20) L1MA4A|LINE|L1 -149219 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr19-5406 chr19 14679180 14679390 + 5.30 0.000 Intergenic MSTA|LTR|ERVL-MaLR -4367 NM_001289158 84658 Hs.658712 NM_032571 ENSG00000131355 ADGRE3 EMR3 adhesion G protein-coupled receptor E3 protein-coding chrX-4695 chrX 86302928 86303138 + 5.30 0.000 intron (NM_001139515, intron 1 of 11) MIR|SINE|MIR 40065 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr14-4438 chr14 33016402 33016612 + 5.30 0.000 intron (NM_001165893, intron 1 of 10) L3|LINE|CR1 77628 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr11-8399 chr11 95027148 95027358 + 5.30 0.000 3' UTR (NM_001161630, exon 1 of 1) 3' UTR (NM_001161630, exon 1 of 1) 1995 NM_001161630 390245 Hs.714692 NM_001161630 ENSG00000235268 KDM4E JMJD2E|KDM4DL|KDM5E lysine demethylase 4E protein-coding chr1-14831 chr1 75610173 75610383 + 5.30 0.000 intron (NM_152697, intron 1 of 23) intron (NM_152697, intron 1 of 23) 836 NM_001320287 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr2-9752 chr2 84223224 84223434 + 5.30 0.000 Intergenic L1M4b|LINE|L1 -67353 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr11-7183 chr11 130464430 130464640 + 5.30 0.000 intron (NM_139055, intron 4 of 7) L2b|LINE|L2 15561 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr4-8684 chr4 180788241 180788451 + 5.30 0.000 Intergenic AluSc8|SINE|Alu 370803 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr16-6634 chr16 68127379 68127589 + 5.30 0.000 intron (NM_004555, intron 3 of 10) AluJb|SINE|Alu 42114 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chrX-4703 chrX 87033738 87033948 + 5.30 0.000 Intergenic SVA_B|Retroposon|SVA -483959 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr18-2851 chr18 8370186 8370396 + 5.30 0.000 intron (NM_002845, intron 21 of 30) intron (NM_002845, intron 21 of 30) -3257 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr3-11007 chr3 180117785 180117995 + 5.30 0.000 Intergenic Intergenic -80953 NM_001349399 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr10-8908 chr10 114895220 114895430 + 5.30 0.000 intron (NM_001135051, intron 16 of 16) L2|LINE|L2 -42870 NM_139169 142940 Hs.21187 NM_139169 ENSG00000165832 TRUB1 PUS4 TruB pseudouridine synthase family member 1 protein-coding chr4-7835 chr4 101321882 101322092 + 5.30 0.000 intron (NM_001130691, intron 1 of 12) intron (NM_001130691, intron 1 of 12) 8427 NR_031656 100302193 NR_031656 ENSG00000221265 MIR1255A MIRN1255A|hsa-mir-1255a microRNA 1255a ncRNA chr2-12374 chr2 52656894 52657104 + 5.30 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 45616 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr6-6636 chr6 154237263 154237473 + 5.30 0.000 intron (NM_015553, intron 5 of 11) intron (NM_015553, intron 5 of 11) 92713 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr19-6741 chr19 38485608 38485818 + 5.30 0.000 exon (NM_000540, exon 34 of 106) exon (NM_000540, exon 34 of 106) 52013 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr1-6684 chr1 52662766 52662976 + 5.30 0.000 intron (NR_135156, intron 4 of 5) L2b|LINE|L2 29703 NM_001042693 348378 Hs.424589 NM_001042693 ENSG00000182183 SHISAL2A FAM159A|PRO7171|WWLS2783 shisa like 2A protein-coding chr1-11606 chr1 224041070 224041280 + 5.30 0.000 Intergenic Intergenic 48445 NR_136590 100287497 Hs.568390 NR_136590 LOC100287497 - septin 7 pseudogene pseudo chr7-8135 chr7 27881528 27881738 + 5.30 0.000 intron (NM_175061, intron 3 of 4) intron (NM_175061, intron 3 of 4) 141538 NM_001362795 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr20-3441 chr20 49297619 49297829 + 5.30 0.000 Intergenic LTR33|LTR|ERVL 17041 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr10-7850 chr10 46219026 46219236 + 5.30 0.000 non-coding (NR_103827, exon 5 of 5) non-coding (NR_103827, exon 5 of 5) 50477 NR_103827 100996567 Hs.546758 NR_103827 ANTXRLP1 - ANTXR like pseudogene 1 pseudo chr7-9210 chr7 117005451 117005661 + 5.30 0.000 intron (NR_161423, intron 1 of 13) intron (NR_161423, intron 1 of 13) -9356 NM_001369602 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr7-8524 chr7 54873387 54873597 + 5.30 0.000 Intergenic L1MEc|LINE|L1 114179 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr11-4069 chr11 19374351 19374561 + 5.30 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 23732 NM_001111018 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr12-5915 chr12 65656165 65656375 + 5.30 0.000 Intergenic L2c|LINE|L2 -13898 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr6-3999 chr6 116557901 116558111 + 5.30 0.000 exon (NM_001256887, exon 4 of 4) exon (NM_001256887, exon 4 of 4) 4875 NM_001366078 221301 Hs.350750 NM_153036 ENSG00000164451 CALHM4 C6orf78|FAM26D calcium homeostasis modulator family member 4 protein-coding chr8-7049 chr8 113896423 113896633 + 5.30 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger -459589 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr14-4494 chr14 37143188 37143398 + 5.30 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -28733 NR_033240 100129794 Hs.601579 NR_033240 ENSG00000258708 SLC25A21-AS1 - SLC25A21 antisense RNA 1 ncRNA chr7-9695 chr7 154804731 154804941 + 5.30 0.000 intron (NR_157196, intron 14 of 25) intron (NR_157196, intron 14 of 25) -123681 NR_024476 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr10-8172 chr10 71293329 71293539 + 5.30 0.000 exon (NM_170744, exon 12 of 17) exon (NM_170744, exon 12 of 17) -25819 NM_001363518 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr13-3843 chr13 49215055 49215265 + 5.30 0.000 Intergenic Intergenic -5178 NM_001507 2862 Hs.248126 NM_001507 ENSG00000102539 MLNR GPR38|MTLR1 motilin receptor protein-coding chr12-6475 chr12 100410674 100410884 + 5.30 0.000 intron (NM_001145288, intron 8 of 10) L2c|LINE|L2 53705 NM_001145288 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr20-1226 chr20 28898378 28898588 + 5.30 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat -181907 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr3-11205 chr3 193974638 193974848 + 5.30 0.000 intron (NR_033944, intron 1 of 2) intron (NR_033944, intron 1 of 2) 19495 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo chr19-3913 chr19 43642049 43642259 + 5.30 0.000 Intergenic AluSz|SINE|Alu -2304 NM_145296 199731 Hs.370984 NM_145296 ENSG00000105767 CADM4 IGSF4C|NECL4|Necl-4|TSLL2|synCAM4 cell adhesion molecule 4 protein-coding chr13-3620 chr13 30094589 30094799 + 5.30 0.000 Intergenic Intergenic 14181 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr1-9975 chr1 81259181 81259391 + 5.30 0.000 Intergenic L2a|LINE|L2 -46906 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr2-5333 chr2 85312500 85312710 + 5.30 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 15384 NM_001206840 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr1-12470 chr1 17972972 17973182 + 5.30 0.000 Intergenic MIR|SINE|MIR -92580 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr1-9390 chr1 31181622 31181832 + 5.30 0.000 intron (NM_024522, intron 6 of 6) CpG 58160 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr5-5711 chr5 167713508 167713718 + 5.30 0.000 intron (NM_001368145, intron 1 of 26) (CACATG)n|Simple_repeat|Simple_repeat -41316 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr8-6166 chr8 32280304 32280514 + 5.30 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -160337 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr14-4075 chr14 64035632 64035842 + 5.30 0.000 intron (NM_015180, intron 45 of 114) AluJo|SINE|Alu 59388 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA chr5-7893 chr5 75230028 75230238 + 5.30 0.000 intron (NM_001164443, intron 2 of 24) MER6A|DNA|TcMar-Tigger 6745 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr13-4484 chr13 113480554 113480764 + 5.30 0.000 exon (NM_001014283, exon 3 of 7) exon (NM_001014283, exon 3 of 7) 10052 NM_001014283 55208 Hs.682987 NM_018185 ENSG00000150401 DCUN1D2 C13orf17 defective in cullin neddylation 1 domain containing 2 protein-coding chr14-3161 chr14 69341477 69341687 + 5.30 0.000 intron (NM_020692, intron 11 of 15) intron (NM_020692, intron 11 of 15) 56717 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr7-2245 chr7 143620835 143621045 + 5.30 0.000 promoter-TSS (NM_001365427) promoter-TSS (NM_001365427) -34 NM_001365429 285966 Hs.743565 NM_173678 ENSG00000170379 TCAF2 FAM115C|FAM139A|GATD9 TRPM8 channel associated factor 2 protein-coding chr12-6484 chr12 102439627 102439837 + 5.30 0.000 intron (NM_000618, intron 2 of 3) Plat_L3|LINE|CR1 38818 NM_001111284 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr3-11174 chr3 191887814 191888024 + 5.30 0.000 Intergenic Intergenic -350711 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr6-7845 chr6 104933872 104934082 + 5.30 0.000 Intergenic MER34|LTR|ERV1 6550 NR_046407 100113403 Hs.649249 NR_046407 ENSG00000203809 LIN28B-AS1 C6orf220|LINC00577|dJ439I14.1 LIN28B antisense RNA 1 ncRNA chr20-3501 chr20 62551077 62551287 + 5.30 0.000 intron (NM_001302812, intron 2 of 4) CpG 379 NR_033263 253868 Hs.337024 NM_152757 MIR1-1HG-AS1 C20orf166-AS1|C20orf200|NCRNA00335 MIR1-1HG antisense RNA 1 ncRNA chr12-7782 chr12 96610958 96611168 + 5.30 0.000 intron (NM_001306084, intron 26 of 67) L1PA5|LINE|L1 121486 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr4-7402 chr4 63892125 63892335 + 5.30 0.000 Intergenic ERVL-E-int|LTR|ERVL 517220 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr11-10681 chr11 128653545 128653755 + 5.30 0.000 Intergenic L1M6|LINE|L1 -32885 NM_001271012 2313 Hs.504281 NM_002017 ENSG00000151702 FLI1 BDPLT21|EWSR2|SIC-1 Fli-1 proto-oncogene, ETS transcription factor protein-coding chr1-14432 chr1 45382372 45382582 + 5.30 0.000 intron (NM_007170, intron 4 of 10) AluJb|SINE|Alu -42007 NR_146882 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr2-5512 chr2 149040142 149040352 + 5.30 0.000 intron (NM_001317006, intron 1 of 4) AluSx1|SINE|Alu 1548 NM_177964 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr2-12363 chr2 51642038 51642248 + 5.30 0.000 intron (NR_135237, intron 5 of 10) L1PA7|LINE|L1 609542 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr2-14690 chr2 237577767 237577977 + 5.30 0.000 intron (NR_033308, intron 2 of 4) intron (NR_033308, intron 2 of 4) 11298 NM_015893 51052 Hs.247710 NM_015893 ENSG00000071677 PRLH PRH|PRRP prolactin releasing hormone protein-coding chr5-6932 chr5 138428908 138429118 + 5.30 0.000 intron (NM_016604, intron 20 of 23) FLAM_C|SINE|Alu -10044 NM_016606 51308 Hs.416090 NM_016606 ENSG00000132563 REEP2 C5orf19|SGC32445|SPG72|Yip2d receptor accessory protein 2 protein-coding chr21-1819 chr21 39845367 39845577 + 5.30 0.000 Intergenic Intergenic -21966 NM_006198 5121 Hs.80296 NM_006198 ENSG00000183036 PCP4 PEP-19 Purkinje cell protein 4 protein-coding chr16-5700 chr16 79466318 79466528 + 5.30 0.000 Intergenic Intergenic 134314 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr7-8914 chr7 94511930 94512140 + 5.30 0.000 intron (NM_001363428, intron 1 of 17) intron (NM_001363428, intron 1 of 17) 2226 NM_001363426 64921 Hs.260041 NM_022900 ENSG00000127995 CASD1 C7orf12|NBLA04196|SOAT CAS1 domain containing 1 protein-coding chr7-8044 chr7 21203944 21204154 + 5.30 0.000 Intergenic MER6A|DNA|TcMar-Tigger -224034 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr21-844 chr21 19341543 19341753 + 5.30 0.000 Intergenic Intergenic 558107 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr17-7461 chr17 14629712 14629922 + 5.30 0.000 Intergenic L3|LINE|CR1 326077 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr4-6371 chr4 108154402 108154612 + 5.30 0.000 intron (NM_001130713, intron 3 of 10) intron (NM_001130713, intron 3 of 10) 12290 NM_001166119 51176 Hs.743478 NM_016269 ENSG00000138795 LEF1 LEF-1|TCF10|TCF1ALPHA|TCF7L3 lymphoid enhancer binding factor 1 protein-coding chr1-8841 chr1 3232641 3232851 + 5.30 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 104771 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr8-1831 chr8 131073513 131073723 + 5.30 0.000 Intergenic Intergenic -32709 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr9-1958 chr9 78036937 78037147 + 5.30 0.000 Intergenic MER96B|DNA|hAT-Tip100 -5231 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr3-8563 chr3 151891251 151891461 + 5.30 0.000 intron (NR_110203, intron 1 of 2) MSTD|LTR|ERVL-MaLR 17713 NM_033050 56670 Hs.133181 NM_033050 ENSG00000198829 SUCNR1 GPR91 succinate receptor 1 protein-coding chr5-9012 chr5 165681267 165681477 + 5.30 0.000 Intergenic L1M4c|LINE|L1 1211093 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr4-1293 chr4 89111275 89111485 + 5.30 0.000 Intergenic CpG -1437 NM_145715 166815 Hs.58924 NM_145715 ENSG00000180346 TIGD2 HEL106 tigger transposable element derived 2 protein-coding chr21-1623 chr21 20699774 20699984 + 5.30 0.000 Intergenic THE1C|LTR|ERVL-MaLR 103229 NR_109786 387486 Hs.576551 NR_024090 ENSG00000224924 LINC00320 C21orf131|NCRNA00320|PRED14 long intergenic non-protein coding RNA 320 ncRNA chr6-5848 chr6 35344634 35344844 + 5.30 0.000 intron (NM_177435, intron 1 of 6) intron (NM_177435, intron 1 of 6) 2181 NM_001171818 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr1-14276 chr1 37243431 37243641 + 5.30 0.000 Intergenic Intergenic 81973 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr7-9115 chr7 107658874 107659084 + 5.30 0.000 non-coding (NR_028137, exon 2 of 2) non-coding (NR_028137, exon 2 of 2) -1849 NM_000441 5172 Hs.571246 NM_000441 ENSG00000091137 SLC26A4 DFNB4|EVA|PDS|TDH2B solute carrier family 26 member 4 protein-coding chrX-3762 chrX 129816209 129816419 + 5.30 0.000 intron (NM_016032, intron 5 of 10) MER8|DNA|TcMar-Tigger 27285 NM_001008222 51114 Hs.193566 NM_016032 ENSG00000188706 ZDHHC9 CGI89|CXorf11|DHHC9|MMSA1|MRXSZ|ZDHHC10|ZNF379|ZNF380 zinc finger DHHC-type containing 9 protein-coding chr16-5017 chr16 35863623 35863833 + 5.30 0.000 Intergenic L2|LINE|L2 117176 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA chr19-4619 chr19 13459495 13459705 + 5.30 0.000 intron (NM_023035, intron 1 of 46) intron (NM_023035, intron 1 of 46) 46860 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr4-2700 chr4 3059577 3059787 + 5.30 0.000 Intergenic AluSx|SINE|Alu 14832 NR_045414 100750326 Hs.575112 NR_045414 HTT-AS HTT-AS1|HTTAS HTT antisense RNA ncRNA chr20-1849 chr20 17308940 17309150 + 5.30 0.000 intron (NM_002594, intron 2 of 11) MLT1H|LTR|ERVL-MaLR 82005 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr11-10460 chr11 117575516 117575726 + 5.30 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 221595 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr12-4962 chr12 75442586 75442796 + 5.30 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -38064 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr16-3492 chr16 3879909 3880119 + 5.30 0.000 5' UTR (NM_001079846, exon 1 of 30) 5' UTR (NM_001079846, exon 1 of 30) 106 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr7-8111 chr7 26380483 26380693 + 5.30 0.000 intron (NR_136272, intron 1 of 1) AluJb|SINE|Alu -3887 NR_136270 105375304 Hs.735352 NR_136270 ENSG00000225792 LOC105375304 - uncharacterized LOC105375304 ncRNA chr17-4671 chr17 21253214 21253424 + 5.30 0.000 promoter-TSS (NM_152914) promoter-TSS (NM_152914) 91 NM_152914 256302 Hs.654713 NM_152914 ENSG00000274180 NATD1 C17orf103|Gtlf3b N-acetyltransferase domain containing 1 protein-coding chr2-6311 chr2 67130295 67130505 + 5.30 0.000 intron (NR_038844, intron 6 of 7) intron (NR_038844, intron 6 of 7) 43954 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA chr1-14412 chr1 44762094 44762304 + 5.30 0.000 TTS (NR_145793) TTS (NR_145793) 164 NR_145793 109623476 NR_145793 SNORD160 - small nucleolar RNA, C/D box 160 snoRNA chr7-9255 chr7 122787675 122787885 + 5.30 0.000 intron (NM_001167940, intron 1 of 29) intron (NM_001167940, intron 1 of 29) -84858 NM_198085 378925 Hs.675191 NM_198085 ENSG00000235631 RNF148 - ring finger protein 148 protein-coding chr19-6482 chr19 17580022 17580232 + 5.30 0.000 intron (NM_024656, intron 10 of 11) intron (NM_024656, intron 10 of 11) 24478 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr17-7115 chr17 75350115 75350325 + 5.30 0.000 intron (NM_002086, intron 2 of 5) FAM|SINE|Alu 55458 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr16-5974 chr16 4913366 4913576 + 5.30 0.000 intron (NM_002705, intron 1 of 21) MIR|SINE|MIR 23677 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr4-8610 chr4 172068084 172068294 + 5.30 0.000 intron (NM_001034845, intron 2 of 12) intron (NM_001034845, intron 2 of 12) -254582 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr7-2171 chr7 73235256 73235466 + 5.30 0.000 intron (NR_003186, intron 7 of 7) CpG-25995 14722 NR_003186 654816 Hs.655201 NR_003186 ENSG00000182487 NCF1B NCF-1B|SH3PXD1B neutrophil cytosolic factor 1B pseudogene pseudo chr7-2358 chr7 4831497 4831707 + 5.30 0.000 intron (NM_018059, intron 5 of 14) AluSz|SINE|Alu 5848 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr10-7880 chr10 48965248 48965458 + 5.30 0.000 intron (NM_020945, intron 54 of 61) intron (NM_020945, intron 54 of 61) 20234 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr10-5946 chr10 122085217 122085427 + 5.30 0.000 exon (NM_001291877, exon 4 of 20) exon (NM_001291877, exon 4 of 20) -27563 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr5-6207 chr5 67234885 67235095 + 5.30 0.000 Intergenic Intergenic -38191 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr14-4172 chr14 80357570 80357780 + 5.30 0.000 intron (NR_038355, intron 2 of 8) MLT1A|LTR|ERVL-MaLR -126618 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr10-7878 chr10 48896273 48896483 + 5.30 0.000 intron (NM_020945, intron 44 of 61) intron (NM_020945, intron 44 of 61) 17857 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr4-6771 chr4 6596787 6596997 + 5.30 0.000 intron (NM_001292038, intron 7 of 18) intron (NM_001292038, intron 7 of 18) 21703 NM_015274 23324 Hs.188464 NM_015274 ENSG00000013288 MAN2B2 - mannosidase alpha class 2B member 2 protein-coding chr3-9250 chr3 39030925 39031135 + 5.30 0.000 intron (NM_001349253, intron 2 of 29) intron (NM_001349253, intron 2 of 29) 20914 NM_001349253 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr14-3658 chr14 84044177 84044387 + 5.30 0.000 Intergenic MER4B|LTR|ERV1 -1227650 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr6-6833 chr6 7427701 7427911 + 5.30 0.000 Intergenic MIR3|SINE|MIR 37977 NM_001348194 83732 Hs.437474 NM_031480 ENSG00000124784 RIOK1 AD034|RIO1|RRP10|bA288G3.1 RIO kinase 1 protein-coding chr1-4888 chr1 34917219 34917429 + 5.30 0.000 intron (NM_001080418, intron 1 of 11) intron (NM_001080418, intron 1 of 11) 12326 NM_001080418 58512 Hs.436393 NM_001080418 ENSG00000116544 DLGAP3 DAP3|SAPAP3 DLG associated protein 3 protein-coding chr18-2775 chr18 1580744 1580954 + 5.30 0.000 Intergenic Intergenic -221220 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr7-8949 chr7 97517202 97517412 + 5.30 0.000 Intergenic Intergenic -214779 NM_013997 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding chr8-7143 chr8 121587021 121587231 + 5.30 0.000 Intergenic Intergenic -52220 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr15-4836 chr15 73807170 73807380 + 5.30 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 39061 NR_120352 101929221 NR_120352 INSYN1-AS1 C15orf59-AS1 INSYN1 antisense RNA 1 ncRNA chr8-6447 chr8 61135366 61135576 + 5.30 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -152499 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr12-6765 chr12 7459737 7459947 + 5.30 0.000 Intergenic L1M1|LINE|L1 -15657 NM_174941 283316 Hs.631727 NM_174941 ENSG00000177675 CD163L1 CD163B|M160|SCARI2|WC1 CD163 molecule like 1 protein-coding chr3-8050 chr3 2704096 2704306 + 5.30 0.000 intron (NM_175607, intron 4 of 24) AluSz|SINE|Alu -188014 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr11-10076 chr11 85182933 85183143 + 5.30 0.000 intron (NM_001142699, intron 4 of 27) intron (NM_001142699, intron 4 of 27) -259617 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-5006 chr9 23449766 23449976 + 5.30 0.000 Intergenic L2c|LINE|L2 222528 NR_121602 101929563 Hs.533220 NR_121602 ENSG00000283982 LOC101929563 - uncharacterized LOC101929563 ncRNA chr12-5679 chr12 98944154 98944364 + 5.30 0.000 intron (NM_152788, intron 17 of 25) AluSq2|SINE|Alu -48968 NM_001352208 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr13-3699 chr13 37193126 37193336 + 5.30 0.000 Intergenic Intergenic -87567 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr21-809 chr21 14243132 14243342 + 5.30 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 27080 NM_144770 54033 Hs.283828 NM_144770 ENSG00000185272 RBM11 - RNA binding motif protein 11 protein-coding chrX-4375 chrX 50388740 50388950 + 5.30 0.000 intron (NM_001013742, intron 12 of 27) MIRb|SINE|MIR 81980 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr3-7524 chr3 176650989 176651199 + 5.30 0.000 Intergenic MER4E|LTR|ERV1 -15562 NR_109968 100505547 Hs.253350 NR_109968 LINC01208 - long intergenic non-protein coding RNA 1208 ncRNA chr2-7181 chr2 207870230 207870440 + 5.30 0.000 intron (NM_001080475, intron 6 of 7) intron (NM_001080475, intron 6 of 7) -100429 NM_003468 7855 Hs.17631 NM_003468 ENSG00000163251 FZD5 C2orf31|HFZ5 frizzled class receptor 5 protein-coding chr4-6105 chr4 15575925 15576135 + 5.30 0.000 intron (NM_001080522, intron 30 of 37) intron (NM_001080522, intron 30 of 37) 79327 NM_012161 26234 Hs.643433 NM_012161 ENSG00000118564 FBXL5 FBL4|FBL5|FLR1 F-box and leucine rich repeat protein 5 protein-coding chr20-4149 chr20 44028114 44028324 + 5.30 0.000 intron (NM_001098797, intron 3 of 8) L2b|LINE|L2 82323 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding GL000194.1-10 GL000194.1 9657 9867 + 5.30 0.000 NA NA NA NA chr18-2271 chr18 75072614 75072824 + 5.30 0.000 Intergenic Intergenic 132794 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr11-8317 chr11 75604363 75604573 + 5.30 0.000 3' UTR (NM_207577, exon 3 of 3) 3' UTR (NM_207577, exon 3 of 3) 21272 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr7-5304 chr7 25073411 25073621 + 5.30 0.000 Intergenic Intergenic 51845 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr18-2780 chr18 2035636 2035846 + 5.30 0.000 Intergenic Intergenic 535764 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr2-10854 chr2 61452843 61453053 + 5.30 0.000 intron (NM_014709, intron 1 of 79) intron (NM_014709, intron 1 of 79) 18139 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding chr6-5970 chr6 85089823 85090033 + 5.30 0.000 Intergenic Intergenic 300258 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr1-13638 chr1 10696439 10696649 + 5.30 0.000 intron (NM_001079843, intron 3 of 20) intron (NM_001079843, intron 3 of 20) 100102 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr1-16235 chr1 209649266 209649476 + 5.30 0.000 intron (NM_001017402, intron 2 of 21) intron (NM_001017402, intron 2 of 21) 1963 NM_001017402 3914 Hs.497636 NM_000228 ENSG00000196878 LAMB3 AI1A|BM600-125KDA|LAM5|LAMNB1 laminin subunit beta 3 protein-coding chr13-4240 chr13 96183573 96183783 + 5.30 0.000 intron (NM_153456, intron 1 of 1) L1MB3|LINE|L1 92839 NM_153456 266722 Hs.171001 NM_153456 ENSG00000185352 HS6ST3 HS6ST-3 heparan sulfate 6-O-sulfotransferase 3 protein-coding chr3-3922 chr3 48833949 48834159 + 5.30 0.000 intron (NM_001321982, intron 1 of 11) AluSx|SINE|Alu 13820 NM_001321989 5576 Hs.631923 NM_004157 ENSG00000114302 PRKAR2A PKR2|PRKAR2 protein kinase cAMP-dependent type II regulatory subunit alpha protein-coding chr3-9809 chr3 73600502 73600712 + 5.30 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) -22961 NR_046681 101927249 Hs.733334 NR_046681 PDZRN3-AS1 - PDZRN3 antisense RNA 1 ncRNA chr19-6315 chr19 10051695 10051905 + 5.30 0.000 intron (NR_027300, intron 12 of 29) AluSz6|SINE|Alu 10444 NR_027300 388503 Hs.655363 NM_001013640 ENSG00000167798 C3P1 CPLP complement component 3 precursor pseudogene pseudo chr12-7200 chr12 49895280 49895490 + 5.30 0.000 intron (NM_012306, intron 5 of 11) intron (NM_012306, intron 5 of 11) 8515 NM_012306 23017 Hs.567424 NM_012306 ENSG00000135472 FAIM2 LFG|LFG2|NGP35|NMP35|TMBIM2 Fas apoptotic inhibitory molecule 2 protein-coding chr17-6447 chr17 13024574 13024784 + 5.30 0.000 Intergenic Intergenic -6615 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr15-3055 chr15 60591031 60591241 + 5.30 0.000 intron (NM_134260, intron 1 of 11) CpG 1390 NM_134262 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr9-6584 chr9 124895560 124895770 + 5.30 0.000 intron (NM_002077, intron 15 of 22) intron (NM_002077, intron 15 of 22) 33535 NM_030978 81873 Hs.132499 NM_030978 ENSG00000136950 ARPC5L ARC16-2 actin related protein 2/3 complex subunit 5 like protein-coding chr1-12233 chr1 213262988 213263198 + 5.30 0.000 intron (NM_001136138, intron 13 of 13) intron (NM_001136138, intron 13 of 13) 211852 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr12-7211 chr12 50178600 50178810 + 5.30 0.000 intron (NM_001243775, intron 4 of 4) LTR24|LTR|ERV1 -11172 NM_001281731 91012 Hs.270525 NM_147190 ENSG00000139624 CERS5 LASS5|Trh4 ceramide synthase 5 protein-coding chr17-6310 chr17 51472623 51472833 + 5.30 0.000 Intergenic Intergenic 37301 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr3-9899 chr3 84055419 84055629 + 5.30 0.000 Intergenic L1MC1|LINE|L1 814051 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr19-2662 chr19 10770366 10770576 + 5.30 0.000 intron (NM_001005362, intron 2 of 19) AluJr|SINE|Alu -9783 NR_039903 100616425 NR_039903 ENSG00000265879 MIR4748 mir-4748 microRNA 4748 ncRNA chr6-4905 chr6 95216880 95217090 + 5.30 0.000 Intergenic MIRb|SINE|MIR 360466 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr12-2913 chr12 55707882 55708092 + 5.30 0.000 promoter-TSS (NM_002206) promoter-TSS (NM_002206) -83 NM_002206 3679 Hs.524484 NM_002206 ENSG00000135424 ITGA7 - integrin subunit alpha 7 protein-coding chr1-16011 chr1 198219247 198219457 + 5.30 0.000 intron (NM_133494, intron 1 of 9) L1PB3|LINE|L1 62354 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr22-3172 chr22 30224151 30224361 + 5.30 0.000 Intergenic Intergenic -14938 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr6-6813 chr6 6749996 6750206 + 5.30 0.000 Intergenic Intergenic -127275 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr3-9812 chr3 73710430 73710640 + 5.30 0.000 Intergenic Intergenic -85594 NM_015009 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr22-3342 chr22 23083382 23083592 + 5.30 0.000 intron (NM_002073, intron 1 of 2) intron (NM_002073, intron 1 of 2) 12968 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr8-4044 chr8 61774082 61774292 + 5.30 0.000 Intergenic Intergenic 59399 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr1-14869 chr1 80037213 80037423 + 5.30 0.000 Intergenic Intergenic -498437 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr19-4614 chr19 13236523 13236733 + 5.30 0.000 intron (NM_023035, intron 31 of 46) intron (NM_023035, intron 31 of 46) 86217 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr19-5471 chr19 39504145 39504355 + 5.30 0.000 exon (NM_203486, exon 5 of 9) exon (NM_203486, exon 5 of 9) 5303 NM_016941 10683 Hs.127792 NM_016941 ENSG00000090932 DLL3 SCDO1 delta like canonical Notch ligand 3 protein-coding chr2-9831 chr2 154588412 154588622 + 5.30 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -110064 NM_001260508 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr8-4229 chr8 87747509 87747719 + 5.30 0.000 Intergenic Intergenic 126401 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr15-3756 chr15 63132549 63132759 + 5.30 0.000 intron (NM_032857, intron 5 of 5) AluJb|SINE|Alu 10793 NM_171846 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr9-7074 chr9 126769430 126769640 + 5.30 0.000 Intergenic AluY|SINE|Alu -35471 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr6-2731 chr6 73660644 73660854 + 5.30 0.000 Intergenic SVA_D|Retroposon|SVA -6757 NM_012434 26503 Hs.597422 NM_012434 ENSG00000119899 SLC17A5 AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 member 5 protein-coding chr7-9726 chr7 157152354 157152564 + 5.30 0.000 intron (NM_014671, intron 1 of 22) intron (NM_014671, intron 1 of 22) 13533 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr15-4545 chr15 56534215 56534425 + 5.30 0.000 Intergenic Intergenic -69183 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr5-4046 chr5 41939826 41940036 + 5.30 0.000 intron (NM_012176, intron 6 of 6) AluJb|SINE|Alu 14650 NM_012176 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding chr1-5762 chr1 147829099 147829309 + 5.30 0.000 Intergenic AluYf1|SINE|Alu -55842 NM_005266 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chr6-2801 chr6 149786182 149786392 + 5.30 0.000 intron (NM_001252050, intron 3 of 6) SVA_D|Retroposon|SVA 36546 NM_001360452 5110 Hs.279257 NM_005389 ENSG00000120265 PCMT1 PIMT protein-L-isoaspartate (D-aspartate) O-methyltransferase protein-coding chr17-4268 chr17 64385424 64385634 + 5.30 0.000 intron (NM_000442, intron 2 of 15) intron (NM_000442, intron 2 of 15) 5331 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr1-14506 chr1 50411894 50412104 + 5.30 0.000 Intergenic L1MC5a|LINE|L1 11444 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr14-4683 chr14 56773469 56773679 + 5.30 0.000 Intergenic AluSz|SINE|Alu 32093 NM_001270525 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding chr6-7179 chr6 38162175 38162385 + 5.30 0.000 Intergenic L2a|LINE|L2 -319316 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr13-4170 chr13 88073530 88073740 + 5.30 0.000 Intergenic Intergenic -69232 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr7-9041 chr7 102208364 102208574 + 5.30 0.000 intron (NM_001202543, intron 20 of 23) AluSx|SINE|Alu -76672 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr19-7077 chr19 55455831 55456041 + 5.30 0.000 intron (NM_001136201, intron 2 of 5) MSR1|Satellite|Satellite 5706 NM_001136201 79763 Hs.467306 NM_024710 ENSG00000063241 ISOC2 - isochorismatase domain containing 2 protein-coding chr8-4416 chr8 107310580 107310790 + 5.30 0.000 intron (NM_001199859, intron 4 of 8) intron (NM_001199859, intron 4 of 8) 25830 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr10-8882 chr10 113595720 113595930 + 5.30 0.000 intron (NM_001322945, intron 36 of 40) intron (NM_001322945, intron 36 of 40) 42772 NM_004132 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr7-7195 chr7 13199188 13199398 + 5.30 0.000 Intergenic Intergenic 511660 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr17-7894 chr17 43560441 43560651 + 5.30 0.000 Intergenic Intergenic -14206 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr4-4216 chr4 15769097 15769307 + 5.30 0.000 Intergenic Intergenic -9126 NR_132660 952 Hs.479214 NM_001775 ENSG00000004468 CD38 ADPRC 1|ADPRC1 CD38 molecule protein-coding chr4-1875 chr4 914447 914657 + 5.30 0.000 intron (NM_005255, intron 1 of 27) intron (NM_005255, intron 1 of 27) 17764 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr16-6845 chr16 82280995 82281205 + 5.30 0.000 Intergenic Intergenic -110876 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr4-3374 chr4 11399699 11399909 + 5.30 0.000 exon (NM_005114, exon 2 of 2) exon (NM_005114, exon 2 of 2) 29090 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chrX-3525 chrX 48980861 48981071 + 5.30 0.000 intron (NM_020137, intron 21 of 25) intron (NM_020137, intron 21 of 25) -9122 NM_004979 3750 Hs.55276 NM_004979 ENSG00000102057 KCND1 KV4.1 potassium voltage-gated channel subfamily D member 1 protein-coding chr8-5767 chr8 142044846 142045056 + 5.30 0.000 Intergenic Intergenic -131388 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr11-9044 chr11 27681658 27681868 + 5.30 0.000 intron (NR_033315, intron 6 of 6) intron (NR_033315, intron 6 of 6) 17904 NM_170734 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr11-3416 chr11 15907046 15907256 + 5.30 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 62470 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr4-4332 chr4 33942523 33942733 + 5.30 0.000 intron (NR_125902, intron 4 of 4) intron (NR_125902, intron 4 of 4) 97265 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr11-10473 chr11 117846165 117846375 + 5.30 0.000 intron (NM_001164832, intron 1 of 8) L1ME3F|LINE|L1 -18181 NM_021603 486 Hs.731865 NM_001680 ENSG00000137731 FXYD2 ATP1G1|HOMG2 FXYD domain containing ion transport regulator 2 protein-coding chr21-1803 chr21 38989709 38989919 + 5.30 0.000 Intergenic Intergenic -12040 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr1-16115 chr1 204551502 204551712 + 5.30 0.000 3' UTR (NM_001278519, exon 5 of 5) 3' UTR (NM_001278519, exon 5 of 5) 35201 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr13-3672 chr13 33992871 33993081 + 5.30 0.000 Intergenic Intergenic 174827 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr19-5231 chr19 39280869 39281079 + 5.30 0.000 Intergenic AluSx1|SINE|Alu 12457 NM_172138 282616 Hs.567792 NM_172138 ENSG00000183709 IFNL2 IL-28A|IL28A interferon lambda 2 protein-coding chr7-8947 chr7 97403315 97403525 + 5.30 0.000 Intergenic Intergenic 286827 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr12-7900 chr12 107519638 107519848 + 5.30 0.000 intron (NM_001347944, intron 1 of 14) MLT1H2|LTR|ERVL-MaLR -61131 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr9-7908 chr9 88833560 88833770 + 5.30 0.000 Intergenic MER115|DNA|hAT-Tip100 -87760 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr5-4018 chr5 33400891 33401101 + 5.30 0.000 Intergenic THE1D|LTR|ERVL-MaLR -39700 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr1-8940 chr1 8137842 8138052 + 5.30 0.000 Intergenic L4_C_Mam|LINE|RTE-X -70725 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr11-8359 chr11 81372074 81372284 + 5.30 0.000 Intergenic AluSz|SINE|Alu 518657 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr22-3137 chr22 23102807 23103017 + 5.30 0.000 intron (NM_002073, intron 2 of 2) L3|LINE|CR1 32393 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr11-9023 chr11 25864080 25864290 + 5.30 0.000 Intergenic Intergenic -324938 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr3-11044 chr3 183009115 183009325 + 5.30 0.000 Intergenic Intergenic -23302 NM_001308101 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr5-7038 chr5 167533375 167533585 + 5.30 0.000 intron (NM_001122679, intron 3 of 29) AluJo|SINE|Alu -40179 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr16-3862 chr16 68528792 68529002 + 5.30 0.000 Intergenic Intergenic -10316 NM_001305204 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr4-5356 chr4 184984265 184984475 + 5.30 0.000 Intergenic Intergenic -34471 NM_001300781 391723 Hs.531242 NM_001029887 ENSG00000187821 HELT HCM1228|HESL|Mgn|bHLHb44 helt bHLH transcription factor protein-coding chr4-4611 chr4 77537312 77537522 + 5.30 0.000 intron (NM_006419, intron 1 of 4) LTR33|LTR|ERVL 25664 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr5-4353 chr5 168262384 168262594 + 5.30 0.000 exon (NM_001368146, exon 28 of 28) exon (NM_001368146, exon 28 of 28) -29156 NM_015238 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr16-6705 chr16 71423257 71423467 + 5.30 0.000 intron (NR_146574, intron 1 of 2) AluYc|SINE|Alu 3102 NR_146574 105371333 Hs.578738 NR_146574 ENSG00000261348 LINC02136 - long intergenic non-protein coding RNA 2136 ncRNA chr2-14252 chr2 212767993 212768203 + 5.30 0.000 Intergenic L2c|LINE|L2 -27233 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr4-6397 chr4 117839941 117840151 + 5.30 0.000 intron (NR_147154, intron 1 of 1) AluSx|SINE|Alu 5645 NR_147154 105377391 Hs.148448 NR_147154 ENSG00000229565 LINC02264 - long intergenic non-protein coding RNA 2264 ncRNA chr3-9793 chr3 72755605 72755815 + 5.30 0.000 intron (NM_018130, intron 10 of 10) intron (NM_018130, intron 10 of 10) -91461 NR_135531 105377162 Hs.123457 NR_135531 LOC105377162 - uncharacterized LOC105377162 ncRNA chr13-3309 chr13 52930160 52930370 + 5.30 0.000 Intergenic Intergenic -81625 NM_002590 5100 Hs.19492 NM_002590 ENSG00000136099 PCDH8 ARCADLIN|PAPC protocadherin 8 protein-coding chr1-15898 chr1 183752135 183752345 + 5.30 0.000 intron (NM_001297669, intron 3 of 18) AluSc|SINE|Alu -52880 NM_001297671 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr11-7540 chr11 14851703 14851913 + 5.30 0.000 intron (NM_000922, intron 12 of 15) intron (NM_000922, intron 12 of 15) 40397 NM_024514 120227 Hs.371427 NM_024514 ENSG00000186104 CYP2R1 - cytochrome P450 family 2 subfamily R member 1 protein-coding chr15-3246 chr15 75246426 75246636 + 5.30 0.000 Intergenic HERV16-int|LTR|ERVL -12027 NM_001164404 653641 Hs.540230 NM_001164404 ENSG00000167195 GOLGA6C - golgin A6 family member C protein-coding chrX-1790 chrX 80274042 80274252 + 5.30 0.000 intron (NR_110646, intron 5 of 5) L1PA7|LINE|L1 61171 NR_110646 101060146 Hs.546064 NR_110646 ENSG00000278530 CHMP1B2P - charged multivesicular body protein 1B2, pseudogene pseudo chr3-8354 chr3 77432912 77433122 + 5.30 0.000 intron (NM_001290039, intron 2 of 26) intron (NM_001290039, intron 2 of 26) 335005 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr5-6241 chr5 88514762 88514972 + 5.30 0.000 Intergenic AluJr4|SINE|Alu -75777 NR_105021 102546226 Hs.535810 NR_105021 ENSG00000250156 LINC02060 - long intergenic non-protein coding RNA 2060 ncRNA chrX-1626 chrX 117485625 117485835 + 5.30 0.000 Intergenic L1M1|LINE|L1 488008 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr2-12194 chr2 41715834 41716044 + 5.30 0.000 Intergenic Intergenic -161616 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr7-8577 chr7 65702948 65703158 + 5.30 0.000 intron (NR_027392, intron 9 of 12) intron (NR_027392, intron 9 of 12) 47871 NR_103527 441242 Hs.373941 NM_001013464 ENSG00000272693 LOC441242 - uncharacterized LOC441242 ncRNA chr5-5327 chr5 128853151 128853361 + 5.30 0.000 Intergenic Intergenic -111871 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr2-11066 chr2 119530757 119530967 + 5.30 0.000 Intergenic Intergenic -6410 NM_002980 6344 Hs.42091 NM_002980 ENSG00000080293 SCTR SR secretin receptor protein-coding chr4-6967 chr4 20544789 20544999 + 5.30 0.000 intron (NM_001289135, intron 20 of 35) intron (NM_001289135, intron 20 of 35) 16619 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr4-8078 chr4 123017773 123017983 + 5.30 0.000 intron (NM_001317799, intron 10 of 10) intron (NM_001317799, intron 10 of 10) 94800 NM_001317799 166378 Hs.709648 NM_145207 ENSG00000145375 SPATA5 AFG2|EHLMRS|SPAF spermatogenesis associated 5 protein-coding chr5-7487 chr5 34666978 34667188 + 5.30 0.000 intron (NM_001145520, intron 1 of 17) MIR|SINE|MIR 10592 NM_001145520 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr9-6437 chr9 77663357 77663567 + 5.30 0.000 Intergenic Intergenic -15140 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr3-9037 chr3 22584351 22584561 + 5.30 0.000 Intergenic Intergenic 618122 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr3-6183 chr3 60249384 60249594 + 5.30 0.000 intron (NM_001320900, intron 6 of 9) MLT1K|LTR|ERVL-MaLR -168580 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr7-6799 chr7 29215051 29215261 + 5.30 0.000 intron (NM_001293072, intron 1 of 12) intron (NM_001293072, intron 1 of 12) -6186 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chrX-5132 chrX 129877395 129877605 + 5.30 0.000 Intergenic Intergenic -28621 NM_001166221 10813 Hs.458598 NM_006649 ENSG00000156697 UTP14A NYCO16|SDCCAG16|Utp14|dJ537K23.3 UTP14A small subunit processome component protein-coding chr2-9278 chr2 221630983 221631193 + 5.30 0.000 Intergenic Intergenic -56886 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr10-8865 chr10 112223035 112223245 + 5.30 0.000 Intergenic LTR16B1|LTR|ERVL -39375 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr10-7122 chr10 99275629 99275839 + 5.30 0.000 Intergenic Intergenic -39859 NM_021828 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding chr6-7795 chr6 98014803 98015013 + 5.30 0.000 Intergenic Intergenic -9623 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr11-9551 chr11 64583706 64583916 + 5.30 0.000 Intergenic L2a|LINE|L2 -6999 NM_001276327 116085 Hs.174424 NM_144585 ENSG00000197891 SLC22A12 OAT4L|RST|URAT1 solute carrier family 22 member 12 protein-coding chr7-3037 chr7 101709050 101709260 + 5.30 0.000 Intergenic Intergenic -79859 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr1-15072 chr1 95903260 95903470 + 5.30 0.000 Intergenic Intergenic -88703 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr5-5415 chr5 136268424 136268634 + 5.30 0.000 intron (NM_001167576, intron 2 of 9) intron (NM_001167576, intron 2 of 9) 33327 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr10-7468 chr10 9093836 9094046 + 5.30 0.000 Intergenic L1PA15|LINE|L1 -181672 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr2-11592 chr2 2121081 2121291 + 5.30 0.000 intron (NM_015025, intron 3 of 24) intron (NM_015025, intron 3 of 24) -198046 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr15-4621 chr15 61971149 61971359 + 5.30 0.000 intron (NM_001018088, intron 27 of 81) AluSx1|SINE|Alu 89193 NM_017684 54832 Hs.511668 NM_017684 ENSG00000129003 VPS13C PARK23 vacuolar protein sorting 13 homolog C protein-coding chr2-11825 chr2 18433119 18433329 + 5.30 0.000 Intergenic Intergenic 127429 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chrX-3060 chrX 108439908 108440118 + 5.30 0.000 promoter-TSS (NM_001847) promoter-TSS (NM_001847) 175 NM_033380 1287 Hs.369089 NM_000495 ENSG00000188153 COL4A5 ASLN|ATS|ATS1|CA54 collagen type IV alpha 5 chain protein-coding chr9-7841 chr9 83752089 83752299 + 5.30 0.000 intron (NM_025211, intron 9 of 12) AluSg|SINE|Alu 43863 NR_135840 105376114 Hs.9589 NR_135839 ENSG00000254473 LOC105376114 - uncharacterized LOC105376114 ncRNA chr8-7390 chr8 139214304 139214514 + 5.30 0.000 Intergenic Intergenic -300368 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr6-4506 chr6 37520145 37520355 + 5.30 0.000 intron (NR_126057, intron 1 of 3) AluJb|SINE|Alu 12902 NR_126057 100505530 Hs.582978 NM_001039791 LINC02520 - long intergenic non-protein coding RNA 2520 ncRNA chr2-6886 chr2 85737612 85737822 + 5.30 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -16274 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr8-5156 chr8 81668766 81668976 + 5.30 0.000 intron (NM_001144879, intron 6 of 7) MSTC-int|LTR|ERVL-MaLR 17454 NM_005536 3612 Hs.656694 NM_005536 ENSG00000133731 IMPA1 IMP|IMPA|MRT59 inositol monophosphatase 1 protein-coding chrX-2043 chrX 17425663 17425873 + 5.30 0.000 promoter-TSS (NR_039925) promoter-TSS (NR_039925) -113 NR_039925 100616249 NR_039925 ENSG00000265465 MIR4768 - microRNA 4768 ncRNA chr3-4431 chr3 15155603 15155813 + 5.30 0.000 Intergenic Intergenic 50251 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen type VI alpha 4 pseudogene 1 pseudo chr16-2953 chr16 4996111 4996321 + 5.30 0.000 intron (NM_014692, intron 6 of 15) intron (NM_014692, intron 6 of 15) -37486 NR_038913 100507589 Hs.729936 NR_038913 NAGPA-AS1 - NAGPA antisense RNA 1 ncRNA chr15-3350 chr15 82657572 82657782 + 5.30 0.000 intron (NR_046096, intron 3 of 3) intron (NR_046096, intron 3 of 3) 4998 NM_001348441 8120 Hs.199593 NM_004644 ENSG00000103723 AP3B2 EIEE48|NAPTB adaptor related protein complex 3 subunit beta 2 protein-coding chr3-8397 chr3 100781844 100782054 + 5.30 0.000 intron (NM_001349331, intron 32 of 42) MIRb|SINE|MIR 72407 NM_001195478 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr16-5183 chr16 7929425 7929635 + 5.30 0.000 Intergenic MSTA|LTR|ERVL-MaLR 596685 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr2-11221 chr2 162118295 162118505 + 5.30 0.000 intron (NR_110255, intron 1 of 3) MER81|DNA|hAT-Blackjack 3959 NR_110255 101929532 Hs.639883 NR_110255 ENSG00000236841 LOC101929532 - uncharacterized LOC101929532 ncRNA chr1-16342 chr1 218390921 218391131 + 5.30 0.000 intron (NR_138149, intron 2 of 7) intron (NR_138149, intron 2 of 7) -45348 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA chr9-7486 chr9 29472702 29472912 + 5.30 0.000 Intergenic L1PA10|LINE|L1 -259206 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr17-7705 chr17 32281983 32282193 + 5.30 0.000 intron (NM_001363836, intron 2 of 8) MIR|SINE|MIR 15912 NM_001363834 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr5-3955 chr5 6455683 6455893 + 5.30 0.000 intron (NM_001145161, intron 1 of 1) intron (NM_001145161, intron 1 of 1) 6929 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr7-7302 chr7 42671764 42671974 + 5.30 0.000 intron (NR_110833, intron 2 of 2) L1ME3E|LINE|L1 34578 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr1-12051 chr1 115842889 115843099 + 5.30 0.000 Intergenic Intergenic -1868 NM_005599 4808 Hs.46296 NM_005599 ENSG00000177551 NHLH2 HEN2|NSCL2|bHLHa34 nescient helix-loop-helix 2 protein-coding chr3-8791 chr3 5366455 5366665 + 5.30 0.000 Intergenic Intergenic -116305 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr10-7448 chr10 7193013 7193223 + 5.30 0.000 intron (NM_001029880, intron 15 of 20) intron (NM_001029880, intron 15 of 20) -6334 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr10-6614 chr10 93851083 93851293 + 5.30 0.000 Intergenic LTR1D1|LTR|ERV1 -42790 NR_144337 159371 Hs.632085 NM_153226 ENSG00000176273 SLC35G1 C10orf60|POST|TMEM20 solute carrier family 35 member G1 protein-coding chr10-8011 chr10 62005493 62005703 + 5.30 0.000 intron (NM_032199, intron 4 of 9) intron (NM_032199, intron 4 of 9) -43759 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr22-3404 chr22 36308370 36308580 + 5.30 0.000 intron (NM_002473, intron 15 of 40) AluJr|SINE|Alu -21568 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr3-10648 chr3 148496773 148496983 + 5.30 0.000 Intergenic L2a|LINE|L2 -200993 NM_000685 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr6-5652 chr6 83977293 83977503 + 5.30 0.000 Intergenic Intergenic -56374 NM_001346541 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr12-6406 chr12 75871525 75871735 + 5.30 0.000 Intergenic L2a|LINE|L2 160146 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr6-5221 chr6 134299258 134299468 + 5.30 0.000 intron (NM_001143676, intron 1 of 13) AluJb|SINE|Alu 18695 NM_001143676 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr15-5005 chr15 80979823 80980033 + 5.30 0.000 intron (NR_126327, intron 2 of 4) intron (NR_126327, intron 2 of 4) 9891 NR_126327 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr5-7540 chr5 38207345 38207555 + 5.30 0.000 Intergenic Intergenic -51109 NM_001205301 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr3-9091 chr3 28032713 28032923 + 5.30 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -198682 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chrX-2331 chrX 57043036 57043246 + 5.30 0.000 Intergenic HERVL-int|LTR|ERVL -47600 NM_001010862 169981 Hs.522672 NM_001010862 ENSG00000204271 SPIN3 SPIN-3|TDRD27|bA445O16.1 spindlin family member 3 protein-coding chr8-2833 chr8 130016155 130016365 + 5.30 0.000 intron (NM_001353245, intron 1 of 13) CpG 300 NM_001353312 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr6-8461 chr6 154494943 154495153 + 5.30 0.000 intron (NM_001368117, intron 1 of 12) intron (NM_001368117, intron 1 of 12) 15198 NM_001368116 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr10-4016 chr10 895584 895794 + 5.30 0.000 intron (NM_001351277, intron 1 of 17) AluSx|SINE|Alu 36016 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr3-7456 chr3 130677451 130677661 + 5.30 0.000 3' UTR (NM_001102608, exon 36 of 36) 3' UTR (NM_001102608, exon 36 of 36) 69273 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr18-2091 chr18 49494820 49495030 + 5.30 0.000 Intergenic Intergenic -2461 NM_001199342 6139 Hs.293653 NM_000985 ENSG00000265681 RPL17 L17|PD-1|RPL23 ribosomal protein L17 protein-coding chr14-4979 chr14 75512966 75513176 + 5.30 0.000 Intergenic AluJb|SINE|Alu -9398 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr2-13034 chr2 108759432 108759642 + 5.30 0.000 intron (NM_006267, intron 18 of 28) intron (NM_006267, intron 18 of 28) -27213 NM_001351561 165055 Hs.362702 NM_144978 ENSG00000163006 CCDC138 - coiled-coil domain containing 138 protein-coding chr19-5369 chr19 7858306 7858516 + 5.30 0.000 intron (NM_001159944, intron 13 of 19) intron (NM_001159944, intron 13 of 19) 15979 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr5-4581 chr5 26309382 26309592 + 5.30 0.000 Intergenic L1MA8|LINE|L1 729099 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr18-2379 chr18 74286197 74286407 + 5.30 0.000 intron (NM_001190807, intron 1 of 3) intron (NM_001190807, intron 1 of 3) 5661 NM_001190807 1528 Hs.465413 NM_001914 ENSG00000166347 CYB5A CYB5|MCB5|METAG cytochrome b5 type A protein-coding chr3-7844 chr3 112847163 112847373 + 5.30 0.000 Intergenic MER74C|LTR|ERVL -1318 NM_001008784 344807 Hs.531814 NM_001008784 ENSG00000206531 CD200R1L CD200R2|CD200RLa CD200 receptor 1 like protein-coding chr9-7125 chr9 131335533 131335743 + 5.30 0.000 Intergenic AluJo|SINE|Alu 45915 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr1-16090 chr1 203264872 203265082 + 5.30 0.000 Intergenic L1M4|LINE|L1 -22175 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr2-10983 chr2 98609240 98609450 + 5.30 0.000 promoter-TSS (NM_001008215) promoter-TSS (NM_001008215) 756 NM_001330353 25972 Hs.13370 NM_014044 ENSG00000115446 UNC50 GMH1|HSD23|PDLs22|UNCL|URP unc-50 inner nuclear membrane RNA binding protein protein-coding chr1-7032 chr1 174349747 174349957 + 5.30 0.000 intron (NM_001366445, intron 11 of 13) SVA_F|Retroposon|SVA 74752 NM_001366449 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr2-6193 chr2 10503431 10503641 + 5.30 0.000 Intergenic MIRc|SINE|MIR 53808 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr17-7823 chr17 40599206 40599416 + 5.30 0.000 Intergenic Intergenic -33839 NM_001301714 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr5-5416 chr5 136344714 136344924 + 5.30 0.000 intron (NM_020389, intron 2 of 11) L1ME5|LINE|L1 20657 NM_001167577 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr5-5090 chr5 97324931 97325141 + 5.30 0.000 Intergenic AluJb|SINE|Alu -141789 NM_018343 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding chr14-2554 chr14 28309434 28309644 + 5.30 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 455780 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr7-5593 chr7 49761044 49761254 + 5.30 0.000 Intergenic L1ME2|LINE|L1 -12489 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chrX-4537 chrX 68355887 68356097 + 5.30 0.000 intron (NM_002547, intron 2 of 24) AluSx|SINE|Alu 77503 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr10-7025 chr10 78577454 78577664 + 5.30 0.000 Intergenic Intergenic 310217 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr1-14764 chr1 68244891 68245101 + 5.30 0.000 Intergenic MIR|SINE|MIR -12450 NM_001193334 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chr1-11387 chr1 47797766 47797976 + 5.30 0.000 intron (NM_001194986, intron 3 of 6) intron (NM_001194986, intron 3 of 6) 199514 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr2-13649 chr2 161208038 161208248 + 5.30 0.000 intron (NM_001199135, intron 4 of 7) intron (NM_001199135, intron 4 of 7) -36596 NR_110164 100996579 Hs.660929 NR_110163 ENSG00000227403 LINC01806 - long intergenic non-protein coding RNA 1806 ncRNA chr16-6527 chr16 62975752 62975962 + 5.30 0.000 Intergenic AluY|SINE|Alu -939419 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr6-7290 chr6 43645664 43645874 + 5.30 0.000 intron (NM_001193341, intron 1 of 5) intron (NM_001193341, intron 1 of 5) 733 NM_152732 221421 Hs.534585 NM_152732 ENSG00000172426 RSPH9 C6orf206|CILD12|MRPS18AL1 radial spoke head 9 homolog protein-coding chr15-4401 chr15 43420920 43421130 + 5.30 0.000 exon (NM_001141979, exon 20 of 28) exon (NM_001141979, exon 20 of 28) 49924 NM_014444 27229 Hs.584887 NM_014444 ENSG00000137822 TUBGCP4 76P|GCP-4|GCP4|Grip76|MCCRP3 tubulin gamma complex associated protein 4 protein-coding chr16-6972 chr16 86279549 86279759 + 5.30 0.000 intron (NR_104139, intron 1 of 5) HERVH-int|LTR|ERV1 6593 NR_104139 101154687 Hs.640512 NR_104139 LINC01081 TCONS00024764|TCONS_00024764 long intergenic non-protein coding RNA 1081 ncRNA chr4-5678 chr4 20287448 20287658 + 5.30 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 35648 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr5-6755 chr5 80917507 80917717 + 5.30 0.000 Intergenic Intergenic -42751 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding chr13-3582 chr13 27320652 27320862 + 5.30 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 49580 NM_001331126 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr5-9064 chr5 170854526 170854736 + 5.30 0.000 Intergenic Intergenic -7387 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chrX-5353 chrX 149117106 149117316 + 5.30 0.000 Intergenic Intergenic 388095 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr9-8053 chr9 97066502 97066712 + 5.30 0.000 Intergenic L1M4c|LINE|L1 15338 NR_002942 340508 Hs.680438 NR_002942 ENSG00000228376 GAS2L1P2 - growth arrest specific 2 like 1 pseudogene 2 pseudo chr4-8303 chr4 143721392 143721602 + 5.30 0.000 Intergenic Intergenic -20822 NM_001168235 166752 Hs.252714 NM_001168235 ENSG00000183090 FREM3 - FRAS1 related extracellular matrix 3 protein-coding chr8-4188 chr8 81584505 81584715 + 5.30 0.000 Intergenic L1M2c|LINE|L1 46667 NR_146081 650747 NR_146081 IMPA1P1 IMPA1P inositol monophosphatase 1 pseudogene 1 pseudo chr1-11198 chr1 242038770 242038980 + 5.30 0.000 Intergenic L1MC3|LINE|L1 -39777 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr18-1607 chr18 44734119 44734329 + 5.30 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 53336 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr15-4951 chr15 78402068 78402278 + 5.30 0.000 Intergenic Intergenic -35258 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chrX-4373 chrX 50208024 50208234 + 5.30 0.000 intron (NM_033031, intron 1 of 12) MER68|LTR|ERVL 3364 NM_033031 85417 Hs.130310 NM_033031 ENSG00000147082 CCNB3 - cyclin B3 protein-coding chr1-7555 chr1 201142749 201142959 + 5.30 0.000 intron (NM_016456, intron 5 of 5) intron (NM_016456, intron 5 of 5) 11620 NM_001288565 252839 Hs.181444 NM_016456 ENSG00000116857 TMEM9 DERM4|TMEM9A transmembrane protein 9 protein-coding chr5-8418 chr5 127569662 127569872 + 5.30 0.000 Intergenic LTR12C|LTR|ERV1 52127 NM_130809 133619 Hs.483259 NM_130809 ENSG00000164244 PRRC1 - proline rich coiled-coil 1 protein-coding chr19-5681 chr19 10396258 10396468 + 5.30 0.000 intron (NM_007065, intron 1 of 7) L2a|LINE|L2 7175 NR_031592 100302213 NR_031592 ENSG00000284268 MIR1181 MIRN1181|hsa-mir-1181 microRNA 1181 ncRNA chr19-4769 chr19 31448354 31448564 + 5.30 0.000 Intergenic Intergenic -99023 NR_138034 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr11-6248 chr11 55381880 55382090 + 5.30 0.000 Intergenic L1MA9|LINE|L1 14101 NM_001005275 81328 Hs.554529 NM_001005275 ENSG00000181958 OR4A15 OR11-118 olfactory receptor family 4 subfamily A member 15 protein-coding chr8-4873 chr8 61697864 61698074 + 5.30 0.000 intron (NM_001164755, intron 1 of 12) AluJr|SINE|Alu -8158 NM_032468 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr11-8434 chr11 109886136 109886346 + 5.30 0.000 Intergenic L1PREC2|LINE|L1 -207151 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr11-8106 chr11 44420711 44420921 + 5.30 0.000 Intergenic MIRc|SINE|MIR -110677 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr2-3518 chr2 232429687 232429897 + 5.30 0.000 Intergenic AluYj4|SINE|Alu 22948 NM_031313 251 Hs.333509 NM_031313 ENSG00000163286 ALPG ALPPL|ALPPL2|GCAP alkaline phosphatase, germ cell protein-coding chr4-8738 chr4 185386109 185386319 + 5.30 0.000 Intergenic L1P4|LINE|L1 -7216 NM_018409 55805 Hs.558513 NM_018409 ENSG00000109771 LRP2BP - LRP2 binding protein protein-coding chr18-3025 chr18 26680528 26680738 + 5.30 0.000 Intergenic Intergenic 23005 NR_024259 728606 Hs.170599 NR_024259 ENSG00000265369 PCAT18 LINC01092 prostate cancer associated transcript 18 ncRNA chr1-14900 chr1 82808627 82808837 + 5.30 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu -94451 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr7-4485 chr7 141966532 141966742 + 5.30 0.000 Intergenic Intergenic 7136 NM_176817 5726 Hs.647085 NM_176817 ENSG00000257138 TAS2R38 PTC|T2R38|T2R61|THIOT taste 2 receptor member 38 protein-coding chr14-4367 chr14 25287076 25287286 + 5.30 0.000 Intergenic MLT2A1|LTR|ERVL -236884 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr19-6097 chr19 3492545 3492755 + 5.30 0.000 intron (NM_001145165, intron 3 of 4) L2b|LINE|L2 8024 NM_031304 83475 Hs.515064 NM_031304 ENSG00000129932 DOHH HLRC1|hDOHH deoxyhypusine hydroxylase protein-coding chr6-8099 chr6 126208083 126208293 + 5.30 0.000 Intergenic Intergenic -131601 NM_001012507 387103 Hs.486401 NM_001012507 ENSG00000203760 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding chr20-3400 chr20 38803851 38804061 + 5.30 0.000 Intergenic L1MB8|LINE|L1 -1741 NM_015568 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr3-9214 chr3 37689688 37689898 + 5.30 0.000 intron (NM_002207, intron 18 of 27) intron (NM_002207, intron 18 of 27) 171987 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr9-6550 chr9 117282667 117282877 + 5.30 0.000 intron (NM_014010, intron 2 of 21) MLT1I|LTR|ERVL-MaLR -101571 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr6-7031 chr6 24521735 24521945 + 5.30 0.000 intron (NM_170740, intron 7 of 10) AluJb|SINE|Alu 26871 NM_001368954 7915 Hs.371723 NM_001080 ENSG00000112294 ALDH5A1 SSADH|SSDH aldehyde dehydrogenase 5 family member A1 protein-coding chr2-11256 chr2 174256930 174257140 + 5.30 0.000 Intergenic AluY|SINE|Alu -8503 NM_001328688 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr8-4894 chr8 75495421 75495631 + 5.30 0.000 intron (NM_001330561, intron 3 of 11) intron (NM_001330561, intron 3 of 11) -44442 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr3-6065 chr3 51358514 51358724 + 5.30 0.000 intron (NM_004947, intron 46 of 52) intron (NM_004947, intron 46 of 52) -26672 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr5-7897 chr5 75368241 75368451 + 5.30 0.000 TTS (NM_005713) TTS (NM_005713) 31126 NM_000859 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding chr2-14655 chr2 235878907 235879117 + 5.30 0.000 intron (NM_001037131, intron 9 of 17) intron (NM_001037131, intron 9 of 17) 289374 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr4-5055 chr4 142834616 142834826 + 5.30 0.000 intron (NM_001331040, intron 1 of 25) intron (NM_001331040, intron 1 of 25) 11814 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr6-8487 chr6 157218356 157218566 + 5.30 0.000 Intergenic Intergenic 105798 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr7-8193 chr7 31419077 31419287 + 5.30 0.000 Intergenic MIR|SINE|MIR -78456 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr17-8510 chr17 79089336 79089546 + 5.30 0.000 TTS (NM_001350453) TTS (NM_001350453) 14504 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr2-13756 chr2 170387653 170387863 + 5.30 0.000 intron (NM_001083615, intron 14 of 33) MIR|SINE|MIR -36815 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr1-8492 chr1 150092627 150092837 + 5.30 0.000 intron (NR_103998, intron 10 of 13) intron (NR_103998, intron 10 of 13) 24956 NM_001279354 11311 Hs.443750 NM_007259 ENSG00000136631 VPS45 H1|H1VPS45|SCN5|VPS45A|VPS45B|VPS54A|VSP45|VSP45A vacuolar protein sorting 45 homolog protein-coding chr2-9857 chr2 180870712 180870922 + 5.30 0.000 intron (NR_104324, intron 4 of 4) L1MA3|LINE|L1 -109568 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr15-5141 chr15 90711731 90711941 + 5.30 0.000 intron (NR_120372, intron 2 of 3) intron (NR_120372, intron 2 of 3) 5304 NR_120372 101926895 Hs.564760 NR_120372 ENSG00000259736 CRTC3-AS1 - CRTC3 antisense RNA 1 ncRNA chr2-6108 chr2 202986695 202986905 + 5.30 0.000 non-coding (NR_148033, exon 15 of 15) non-coding (NR_148033, exon 15 of 15) -28079 NM_001114132 65065 Hs.648846 NM_198945 ENSG00000144426 NBEAL1 A530083I02Rik|ALS2CR16|ALS2CR17 neurobeachin like 1 protein-coding chr2-11932 chr2 25201531 25201741 + 5.30 0.000 Intergenic Intergenic -2677 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr18-3272 chr18 51325512 51325722 + 5.30 0.000 Intergenic Intergenic -66425 NR_040075 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr1-8969 chr1 9555539 9555749 + 5.30 0.000 intron (NM_032315, intron 2 of 6) intron (NM_032315, intron 2 of 6) 16179 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr17-6257 chr17 31082836 31083046 + 5.30 0.000 Intergenic AluY|SINE|Alu 11484 NR_039886 100616266 NR_039886 ENSG00000265444 MIR4733 - microRNA 4733 ncRNA chr17-7921 chr17 44449506 44449716 + 5.30 0.000 intron (NM_001304942, intron 2 of 6) AluSp|SINE|Alu -12760 NM_001304943 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr4-7261 chr4 47760542 47760752 + 5.30 0.000 intron (NM_006587, intron 4 of 21) Tigger1|DNA|TcMar-Tigger -70698 NR_125881 101927179 Hs.570822 NR_125880 LOC101927179 - uncharacterized LOC101927179 ncRNA chr3-8835 chr3 8988058 8988268 + 5.30 0.000 intron (NM_014850, intron 21 of 21) Tigger19b|DNA|TcMar-Tigger -24691 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr2-13823 chr2 175727189 175727399 + 5.30 0.000 Intergenic Intergenic 274973 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr5-9058 chr5 170556669 170556879 + 5.30 0.000 intron (NM_001278339, intron 1 of 7) intron (NM_001278339, intron 1 of 7) 52754 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr4-4186 chr4 10724103 10724313 + 5.30 0.000 Intergenic L2a|LINE|L2 -39440 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr2-11198 chr2 158701472 158701682 + 5.30 0.000 intron (NR_135242, intron 1 of 3) intron (NR_135242, intron 1 of 3) 33425 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr3-9871 chr3 81196397 81196607 + 5.30 0.000 Intergenic L1MD|LINE|L1 202634 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr1-16528 chr1 231778081 231778291 + 5.30 0.000 intron (NM_001164547, intron 6 of 7) intron (NM_001164547, intron 6 of 7) 40331 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 ncRNA chr10-8600 chr10 96833519 96833729 + 5.30 0.000 intron (NM_001170766, intron 2 of 8) intron (NM_001170766, intron 2 of 8) 679 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chrX-3049 chrX 101254578 101254788 + 5.30 0.000 intron (NM_001939, intron 18 of 23) intron (NM_001939, intron 18 of 23) 34739 NM_001171184 1821 Hs.159291 NM_001939 ENSG00000102385 DRP2 DRP-2 dystrophin related protein 2 protein-coding chr17-7951 chr17 47502077 47502287 + 5.30 0.000 Intergenic Intergenic -9562 NR_033934 653479 Hs.537279 NR_033934 MRPL45P2 - mitochondrial ribosomal protein L45 pseudogene 2 pseudo chr1-10925 chr1 210178317 210178527 + 5.30 0.000 Intergenic L2c|LINE|L2 -54374 NM_001354173 56256 Hs.600545 NM_019605 ENSG00000082497 SERTAD4 DJ667H12.2 SERTA domain containing 4 protein-coding chr8-5195 chr8 106434353 106434563 + 5.30 0.000 intron (NM_018002, intron 2 of 15) intron (NM_018002, intron 2 of 15) -13466 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr6-5635 chr6 66273652 66273862 + 5.30 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 485878 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo chr3-10128 chr3 113524634 113524844 + 5.30 0.000 Intergenic MER89-int|LTR|ERV1 -7632 NM_001308350 54847 Hs.591291 NM_017699 ENSG00000072858 SIDT1 SID-1|SID1 SID1 transmembrane family member 1 protein-coding chr8-5332 chr8 4522758 4522968 + 5.30 0.000 intron (NM_033225, intron 2 of 69) MIR|SINE|MIR 472051 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr10-8860 chr10 111669146 111669356 + 5.30 0.000 Intergenic HERVL-int|LTR|ERVL 514514 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr18-3528 chr18 75779160 75779370 + 5.30 0.000 Intergenic Intergenic -66862 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chr8-5579 chr8 87053506 87053716 + 5.30 0.000 intron (NM_173538, intron 4 of 10) HUERS-P3-int|LTR|ERV1 187196 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr11-9000 chr11 23932923 23933133 + 5.30 0.000 Intergenic Intergenic -513838 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr13-3602 chr13 28981986 28982196 + 5.30 0.000 intron (NM_001366651, intron 2 of 14) intron (NM_001366651, intron 2 of 14) -42366 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr11-8133 chr11 47400819 47401029 + 5.30 0.000 promoter-TSS (NR_039707) promoter-TSS (NR_039707) -46 NR_039707 100616222 NR_039707 ENSG00000264583 MIR4487 mir-4487 microRNA 4487 ncRNA chr9-2485 chr9 83948328 83948538 + 5.30 0.000 intron (NM_001317997, intron 3 of 4) SVA_B|Retroposon|SVA 8309 NM_032307 84267 Hs.208914 NM_032307 ENSG00000165118 C9orf64 - chromosome 9 open reading frame 64 protein-coding chr4-3369 chr4 8340860 8341070 + 5.30 0.000 Intergenic Intergenic 20789 NR_149125 105374374 Hs.145224 NR_149125 ENSG00000249145 LINC02517 - long intergenic non-protein coding RNA 2517 ncRNA chr10-3823 chr10 133096632 133096842 + 5.30 0.000 intron (NM_001083909, intron 2 of 6) intron (NM_001083909, intron 2 of 6) -5509 NM_001291085 84435 Hs.435183 NM_032422 ENSG00000197177 ADGRA1 GPR123 adhesion G protein-coupled receptor A1 protein-coding chr4-6997 chr4 23214438 23214648 + 5.30 0.000 Intergenic Intergenic 500454 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr19-6633 chr19 31666142 31666352 + 5.30 0.000 Intergenic Intergenic 73966 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr1-14387 chr1 43892313 43892523 + 5.30 0.000 intron (NR_073018, intron 6 of 10) intron (NR_073018, intron 6 of 10) -40902 NM_057090 9048 Hs.632404 NM_003976 ENSG00000117407 ARTN ART|ENOVIN|EVN|NBN artemin protein-coding chr6-8521 chr6 159600719 159600929 + 5.30 0.000 Intergenic LTR52|LTR|ERVL 92417 NM_001322815 6648 Hs.487046 NM_000636 ENSG00000112096 SOD2 IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD superoxide dismutase 2 protein-coding chr7-9662 chr7 151531794 151532004 + 5.30 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -12004 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr7-2958 chr7 157078291 157078501 + 5.30 0.000 Intergenic CpG -60530 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr2-8048 chr2 72079172 72079382 + 5.30 0.000 Intergenic Intergenic 68585 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr4-5340 chr4 183743610 183743820 + 5.30 0.000 Intergenic AluJb|SINE|Alu -54307 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr7-8282 chr7 38943732 38943942 + 5.30 0.000 Intergenic Intergenic -34072 NM_001370959 11281 Hs.137106 NM_007252 ENSG00000106536 POU6F2 RPF-1|WT5|WTSL POU class 6 homeobox 2 protein-coding chr19-5599 chr19 2491483 2491693 + 5.30 0.000 Intergenic Intergenic 15461 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr3-10197 chr3 120298204 120298414 + 5.30 0.000 Intergenic AluSx1|SINE|Alu 51045 NM_001099678 116064 Hs.518084 NM_001099678 ENSG00000163428 LRRC58 - leucine rich repeat containing 58 protein-coding chrX-2692 chrX 119211282 119211492 + 5.30 0.000 Intergenic LTR12C|LTR|ERV1 -24858 NM_001282621 10857 Hs.90061 NM_006667 ENSG00000101856 PGRMC1 Dap1|HPR6.6|IZA|MPR progesterone receptor membrane component 1 protein-coding chr3-9394 chr3 48005034 48005244 + 5.30 0.000 intron (NM_002375, intron 1 of 18) AluSx3|SINE|Alu 83709 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr6-4364 chr6 20518025 20518235 + 5.30 0.000 Intergenic AluSz|SINE|Alu -16327 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr17-2686 chr17 49502169 49502379 + 5.30 0.000 intron (NM_002507, intron 2 of 5) intron (NM_002507, intron 2 of 5) 6981 NM_002507 4804 Hs.415768 NM_002507 ENSG00000064300 NGFR CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR nerve growth factor receptor protein-coding chr2-5252 chr2 54160160 54160370 + 5.30 0.000 intron (NM_138448, intron 3 of 3) intron (NM_138448, intron 3 of 3) 36982 NM_001320588 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr1-15436 chr1 153527718 153527928 + 5.30 0.000 Intergenic MER83A-int|LTR|ERV1 8168 NM_014624 6277 Hs.275243 NM_014624 ENSG00000197956 S100A6 2A9|5B10|CABP|CACY|PRA|S10A6 S100 calcium binding protein A6 protein-coding chr12-3952 chr12 6264580 6264790 + 5.30 0.000 Intergenic MIRc|SINE|MIR -45751 NM_018173 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr20-2988 chr20 39561373 39561583 + 5.30 0.000 Intergenic Intergenic -336730 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr11-10649 chr11 126603041 126603251 + 5.30 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -49632 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr15-3553 chr15 26069332 26069542 + 5.30 0.000 Intergenic Intergenic -46376 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr13-3894 chr13 53407255 53407465 + 5.30 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -255460 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr10-4424 chr10 67691836 67692046 + 5.30 0.000 intron (NM_013266, intron 1 of 17) SVA_D|Retroposon|SVA 4254 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chr11-9073 chr11 30154833 30155043 + 5.30 0.000 Intergenic L2a|LINE|L2 -76076 NM_000510 2488 Hs.36975 NM_000510 ENSG00000131808 FSHB HH24 follicle stimulating hormone subunit beta protein-coding chr17-6973 chr17 48669843 48670053 + 5.30 0.000 Intergenic AluSp|SINE|Alu -37389 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr17-6661 chr17 74417181 74417391 + 5.30 0.000 Intergenic AluSz6|SINE|Alu -14802 NM_022036 55890 Hs.446438 NM_018653 ENSG00000170412 GPRC5C RAIG-3|RAIG3 G protein-coupled receptor class C group 5 member C protein-coding chr6-8371 chr6 149283894 149284104 + 5.18 0.000 intron (NM_001292035, intron 2 of 6) intron (NM_001292035, intron 2 of 6) -26448 NR_149096 105378049 Hs.615624 NR_149096 ENSG00000225924 TAB2-AS1 - TAB2 antisense RNA 1 ncRNA chr10-6287 chr10 93774256 93774466 + 5.18 0.000 intron (NR_131777, intron 2 of 5) MER5B|DNA|hAT-Charlie 16425 NM_005097 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr2-9241 chr2 218938174 218938384 + 5.18 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -7642 NR_110238 101928537 Hs.611129 NR_110238 ENSG00000228135 LINC01494 - long intergenic non-protein coding RNA 1494 ncRNA chr2-13548 chr2 152804914 152805124 + 5.18 0.000 Intergenic LTR12C|LTR|ERV1 86382 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr22-2142 chr22 39115737 39115947 + 5.18 0.000 Intergenic MER4E1|LTR|ERV1 18598 NM_001166002 164668 Hs.440515 NM_181773 ENSG00000100298 APOBEC3H A3H|ARP-10|ARP10 apolipoprotein B mRNA editing enzyme catalytic subunit 3H protein-coding chr8-7386 chr8 139015237 139015447 + 5.18 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -101301 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr1-10445 chr1 160091522 160091732 + 5.18 0.000 3' UTR (NM_001320247, exon 7 of 7) 3' UTR (NM_001320247, exon 7 of 7) 6992 NM_001320247 93185 Hs.332012 NM_052868 ENSG00000162729 IGSF8 CD316|CD81P3|EWI-2|EWI2|KCT-4|LIR-D1|PGRL immunoglobulin superfamily member 8 protein-coding chr2-12257 chr2 44849557 44849767 + 5.18 0.000 Intergenic Intergenic 89226 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr3-5974 chr3 47054498 47054708 + 5.18 0.000 intron (NR_146158, intron 16 of 21) intron (NR_146158, intron 16 of 21) 43061 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr21-1823 chr21 40077467 40077677 + 5.18 0.000 intron (NM_001271534, intron 26 of 32) intron (NM_001271534, intron 26 of 32) 134859 NR_039917 100616148 NR_039917 ENSG00000263973 MIR4760 - microRNA 4760 ncRNA KI270743.1-1 KI270743.1 49039 49249 + 5.18 0.000 NA NA NA NA chr7-9328 chr7 128841061 128841271 + 5.18 0.000 intron (NM_001127487, intron 11 of 46) intron (NM_001127487, intron 11 of 46) 10737 NM_001458 2318 Hs.58414 NM_001458 ENSG00000128591 FLNC ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5 filamin C protein-coding chr13-3603 chr13 28987245 28987455 + 5.18 0.000 intron (NM_001366651, intron 2 of 14) intron (NM_001366651, intron 2 of 14) -37107 NM_001033602 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr21-1577 chr21 14942849 14943059 + 5.18 0.000 Intergenic Intergenic -24286 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr14-4020 chr14 45879365 45879575 + 5.18 0.000 Intergenic AluSg|SINE|Alu -163868 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr8-6717 chr8 86139859 86140069 + 5.18 0.000 intron (NM_152565, intron 3 of 7) intron (NM_152565, intron 3 of 7) 41054 NM_152565 245972 Hs.436360 NM_152565 ENSG00000147614 ATP6V0D2 ATP6D2|VMA6 ATPase H+ transporting V0 subunit d2 protein-coding chr10-5614 chr10 94280086 94280296 + 5.18 0.000 non-coding (NR_033969, exon 4 of 4) non-coding (NR_033969, exon 4 of 4) 6879 NR_033969 100128054 Hs.677562 NR_033969 ENSG00000268894 PLCE1-AS1 - PLCE1 antisense RNA 1 ncRNA chr20-3888 chr20 31382311 31382521 + 5.18 0.000 intron (NR_073153, intron 1 of 2) MIR|SINE|MIR 8174 NM_001271209 245932 Hs.516998 NM_153289 ENSG00000180483 DEFB119 DEFB-19|DEFB-20|DEFB120|DEFB20|ESC42-RELA|ESC42-RELB defensin beta 119 protein-coding chrX-5058 chrX 123842079 123842289 + 5.18 0.000 Intergenic AluSx1|SINE|Alu -17628 NM_001204401 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr12-7663 chr12 83877301 83877511 + 5.18 0.000 Intergenic ERVL-E-int|LTR|ERVL 1035393 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr19-3618 chr19 56133854 56134064 + 5.18 0.000 Intergenic L2c|LINE|L2 -7328 NM_001253792 55311 Hs.24545 NM_018337 ENSG00000167685 ZNF444 EZF-2|EZF2|ZSCAN17 zinc finger protein 444 protein-coding chr3-8937 chr3 13978944 13979154 + 5.18 0.000 intron (NR_002223, intron 1 of 2) intron (NR_002223, intron 1 of 2) 41742 NR_002223 348825 Hs.529180 NR_002223 ENSG00000180438 TPRXL TPRX3P tetrapeptide repeat homeobox like pseudo chrX-4438 chrX 54894032 54894242 + 5.18 0.000 Intergenic L1M2|LINE|L1 -26426 NM_001271183 7216 Hs.633653 NM_016157 ENSG00000067445 TRO MAGE-d3|MAGED3 trophinin protein-coding chr12-8187 chr12 122551889 122552099 + 5.18 0.000 intron (NM_014708, intron 16 of 63) AluSg|SINE|Alu 24745 NM_014708 9735 Hs.300559 NM_014708 ENSG00000184445 KNTC1 ROD kinetochore associated 1 protein-coding chr21-1755 chr21 35395939 35396149 + 5.18 0.000 intron (NR_073512, intron 2 of 2) intron (NR_073512, intron 2 of 2) 184720 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr9-7855 chr9 85093096 85093306 + 5.18 0.000 Intergenic MER74B|LTR|ERVL 387300 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr14-4399 chr14 29851505 29851715 + 5.18 0.000 intron (NM_001330069, intron 1 of 18) L1PA16|LINE|L1 75486 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr8-6371 chr8 53470046 53470256 + 5.18 0.000 Intergenic Intergenic 53814 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr1-10992 chr1 217214970 217215180 + 5.18 0.000 Intergenic L1PA10|LINE|L1 -77373 NM_001350124 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr22-3871 chr22 34054381 34054591 + 5.18 0.000 Intergenic MIRb|SINE|MIR -131598 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr21-727 chr21 36602900 36603110 + 5.18 0.000 Intergenic Intergenic -26436 NM_001146077 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr15-4362 chr15 41567323 41567533 + 5.18 0.000 exon (NM_006293, exon 7 of 19) exon (NM_006293, exon 7 of 19) 7456 NM_001330264 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr1-11420 chr1 61742093 61742303 + 5.18 0.000 promoter-TSS (NM_176877) promoter-TSS (NM_176877) -282 NM_176877 10207 Hs.478125 NM_005799 ENSG00000132849 PATJ Cipp|INADL|InaD-like|hINADL PATJ crumbs cell polarity complex component protein-coding chr7-5099 chr7 2799843 2800053 + 5.18 0.000 intron (NM_001293092, intron 1 of 2) L1MD1|LINE|L1 15282 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr14-3867 chr14 87249456 87249666 + 5.18 0.000 Intergenic L1ME2|LINE|L1 343783 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr17-4204 chr17 29281580 29281790 + 5.18 0.000 intron (NM_020772, intron 2 of 3) AluJo|SINE|Alu 12463 NM_020772 57532 Hs.462598 NM_020772 ENSG00000108256 NUFIP2 182-FIP|82-FIP|FIP-82|PIG1 nuclear FMR1 interacting protein 2 protein-coding chr18-1191 chr18 26657001 26657211 + 5.18 0.000 intron (NM_001258222, intron 1 of 4) CpG 367 NM_001258222 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr10-9177 chr10 130606491 130606701 + 5.18 0.000 Intergenic Intergenic 356072 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr1-15631 chr1 162671144 162671354 + 5.18 0.000 intron (NM_006182, intron 2 of 17) intron (NM_006182, intron 2 of 17) 38785 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr19-3102 chr19 8334869 8335079 + 5.18 0.000 exon (NM_198471, exon 3 of 11) exon (NM_198471, exon 3 of 11) 8288 NM_198471 256949 Hs.745036 NM_198471 ENSG00000186994 KANK3 ANKRD47 KN motif and ankyrin repeat domains 3 protein-coding chr7-5160 chr7 6355465 6355675 + 5.18 0.000 Intergenic AluSx|SINE|Alu -6603 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chr18-2726 chr18 71126142 71126352 + 5.18 0.000 Intergenic AluSx|SINE|Alu 452709 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr11-5073 chr11 112593819 112594029 + 5.18 0.000 Intergenic Intergenic -38122 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr3-6880 chr3 153438390 153438600 + 5.18 0.000 intron (NR_146713, intron 5 of 6) intron (NR_146713, intron 5 of 6) -46000 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr10-4847 chr10 14302210 14302420 + 5.18 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 28569 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr7-7260 chr7 30883224 30883434 + 5.18 0.000 intron (NR_037598, intron 19 of 19) intron (NR_037598, intron 19 of 19) -28365 NM_198098 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr2-12950 chr2 102611792 102612002 + 5.18 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -7656 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr10-6734 chr10 128089496 128089706 + 5.18 0.000 Intergenic Intergenic -27176 NR_136150 105378553 NR_136149 AS-PTPRE - lncRNA antisense to PTPRE protein-coding gene ncRNA chr1-14488 chr1 48552018 48552228 + 5.18 0.000 intron (NM_001323575, intron 11 of 12) AluSg|SINE|Alu -79915 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr5-8851 chr5 152371293 152371503 + 5.18 0.000 Intergenic Intergenic 33881 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr16-6287 chr16 31697038 31697248 + 5.18 0.000 Intergenic Intergenic -3470 NR_024034 100132341 Hs.715792 NM_024048 ENSG00000131797 CLUHP3 C16orf67|KIAA0664L3|KIAA0664P3|URLC3 clustered mitochondria homolog pseudogene 3 pseudo chr8-5898 chr8 16953895 16954105 + 5.18 0.000 Intergenic L1MC2|LINE|L1 48345 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr17-7426 chr17 10669037 10669247 + 5.18 0.000 Intergenic Intergenic -11833 NM_002470 4621 Hs.440895 NM_002470 ENSG00000109063 MYH3 CPSKF1A|CPSKF1B|DA2A|DA2B|DA2B3|DA8|HEMHC|MYHC-EMB|MYHSE1|SMHCE myosin heavy chain 3 protein-coding chrX-884 chrX 18444986 18445196 + 5.18 0.000 intron (NM_001037343, intron 2 of 21) AluSz|SINE|Alu 2867 NM_001037343 6792 Hs.659851 NM_003159 ENSG00000008086 CDKL5 CFAP247|EIEE2|ISSX|STK9 cyclin dependent kinase like 5 protein-coding chrX-5115 chrX 128737000 128737210 + 5.18 0.000 Intergenic L1PA3|LINE|L1 -684702 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr22-3761 chr22 27658910 27659120 + 5.18 0.000 Intergenic Intergenic 142741 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr14-4681 chr14 56417327 56417537 + 5.18 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -96899 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr12-4516 chr12 23888923 23889133 + 5.18 0.000 intron (NM_001330785, intron 2 of 14) intron (NM_001330785, intron 2 of 14) 60642 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chrX-3802 chrX 139536034 139536244 + 5.18 0.000 intron (NM_000133, intron 1 of 7) (TA)n|Simple_repeat|Simple_repeat 5403 NM_000133 2158 Hs.522798 NM_000133 ENSG00000101981 F9 F9 p22|FIX|HEMB|P19|PTC|THPH8 coagulation factor IX protein-coding chr21-1918 chr21 45096012 45096222 + 5.18 0.000 intron (NM_001346688, intron 1 of 11) LTR79|LTR|ERVL 21066 NM_001346688 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr8-4869 chr8 53260275 53260485 + 5.18 0.000 Intergenic Intergenic -8683 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr18-3234 chr18 48036962 48037172 + 5.18 0.000 intron (NM_001371287, intron 5 of 5) intron (NM_001371287, intron 5 of 5) 100081 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr3-7745 chr3 58025924 58026134 + 5.18 0.000 intron (NM_001164318, intron 1 of 45) MIRb|SINE|MIR 17607 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr5-7461 chr5 32566643 32566853 + 5.18 0.000 Intergenic Intergenic -18809 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr6-7864 chr6 106546850 106547060 + 5.18 0.000 intron (NM_001371242, intron 13 of 21) intron (NM_001371242, intron 13 of 21) 35100 NM_001624 202 Hs.724262 NM_001624 ENSG00000112297 CRYBG1 AIM1|ST4 crystallin beta-gamma domain containing 1 protein-coding chr1-4754 chr1 8501055 8501265 + 5.18 0.000 intron (NM_001042681, intron 8 of 22) intron (NM_001042681, intron 8 of 22) -6247 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr2-10303 chr2 138202475 138202685 + 5.18 0.000 Intergenic AluJb|SINE|Alu 100696 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr12-7984 chr12 111173073 111173283 + 5.18 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 73174 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr16-6782 chr16 77504292 77504502 + 5.18 0.000 Intergenic AluJb|SINE|Alu -69363 NM_001326358 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr3-7826 chr3 105172057 105172267 + 5.18 0.000 Intergenic AluY|SINE|Alu -194551 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr6-7436 chr6 54107095 54107305 + 5.18 0.000 intron (NM_001281746, intron 1 of 11) intron (NM_001281746, intron 1 of 11) -4243 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding chr20-3879 chr20 30631608 30631818 + 5.18 0.000 Intergenic Intergenic -228251 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 MLLT10 pseudogene 1 pseudo chrX-1831 chrX 103049540 103049750 + 5.18 0.000 Intergenic AluY|SINE|Alu 14526 NM_018476 55859 Hs.334370 NM_018476 ENSG00000133169 BEX1 BEX2|HBEX2|HGR74-h brain expressed X-linked 1 protein-coding chr18-3494 chr18 73267823 73268033 + 5.18 0.000 Intergenic Intergenic -3430 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA chr22-3119 chr22 19608256 19608466 + 5.18 0.000 Intergenic Intergenic -41522 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chrX-4688 chrX 85377242 85377452 + 5.18 0.000 intron (NM_001307940, intron 2 of 15) intron (NM_001307940, intron 2 of 15) 2318 NM_024921 79983 Hs.267038 NM_024921 ENSG00000124429 POF1B POF|POF2B POF1B actin binding protein protein-coding chr14-3828 chr14 73673889 73674099 + 5.18 0.000 intron (NM_001201366, intron 6 of 8) intron (NM_001201366, intron 6 of 8) 29008 NM_031427 83544 Hs.271270 NM_031427 ENSG00000119661 DNAL1 C14orf168|CILD16|LC1 dynein axonemal light chain 1 protein-coding chr9-3523 chr9 34551809 34552019 + 5.18 0.000 3' UTR (NM_001842, exon 9 of 9) 3' UTR (NM_001842, exon 9 of 9) -16098 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr1-15201 chr1 110167011 110167221 + 5.18 0.000 exon (NM_001010898, exon 2 of 12) exon (NM_001010898, exon 2 of 12) 16622 NM_001010898 388662 Hs.128382 NM_001010898 ENSG00000197106 SLC6A17 MRT48|NTT4 solute carrier family 6 member 17 protein-coding chr5-3830 chr5 105697211 105697421 + 5.18 0.000 Intergenic THE1A|LTR|ERVL-MaLR 597842 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr17-7098 chr17 71480770 71480980 + 5.18 0.000 Intergenic AluSq2|SINE|Alu -278696 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr4-3272 chr4 120604894 120605104 + 5.18 0.000 Intergenic L1MA4|LINE|L1 317867 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr5-8260 chr5 111829710 111829920 + 5.18 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) -71597 NM_001142476 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr16-6363 chr16 51117610 51117820 + 5.18 0.000 intron (NR_039672, intron 2 of 6) intron (NR_039672, intron 2 of 6) 32882 NM_001127892 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr22-4295 chr22 50016000 50016210 + 5.18 0.000 Intergenic Intergenic -3340 NM_001371417 chr12-6549 chr12 117099412 117099622 + 5.18 0.000 promoter-TSS (NM_017899) promoter-TSS (NM_017899) 50 NR_120464 101928244 Hs.742266 NR_120464 TESC-AS1 - TESC antisense RNA 1 (head to head) ncRNA chrX-5415 chrX 153400908 153401118 + 5.18 0.000 promoter-TSS (NM_001351294) promoter-TSS (NM_001351294) -317 NM_001351294 649238 Hs.112603 NM_001351293 ENSG00000214897 PNMA6E - PNMA family member 6E protein-coding chr6-3569 chr6 58207633 58207843 + 5.18 0.000 Intergenic Intergenic -246292 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr12-4847 chr12 57913584 57913794 + 5.18 0.000 Intergenic LTR1B|LTR|ERV1 -17207 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr12-8114 chr12 119869764 119869974 + 5.18 0.000 intron (NM_007174, intron 2 of 46) MER102a|DNA|hAT-Charlie 7451 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr2-6724 chr2 29052970 29053180 + 5.18 0.000 3' UTR (NM_199280, exon 20 of 20) 3' UTR (NM_199280, exon 20 of 20) 21448 NM_001029883 388939 Hs.354243 NM_001029883 ENSG00000179270 PCARE C2orf71|RP54 photoreceptor cilium actin regulator protein-coding chr20-3573 chr20 3605739 3605949 + 5.18 0.000 intron (NM_001323332, intron 24 of 25) L1PA11|LINE|L1 57555 NM_022139 64096 Hs.302025 NM_022139 ENSG00000125861 GFRA4 - GDNF family receptor alpha 4 protein-coding chr5-4766 chr5 53796855 53797065 + 5.18 0.000 intron (NR_147168, intron 1 of 3) intron (NR_147168, intron 1 of 3) 22722 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr9-4269 chr9 99357633 99357843 + 5.18 0.000 intron (NR_102271, intron 5 of 5) intron (NR_102271, intron 5 of 5) 17519 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr8-4451 chr8 115099408 115099618 + 5.18 0.000 Intergenic Intergenic 568500 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr14-3674 chr14 98182684 98182894 + 5.18 0.000 Intergenic Intergenic -204665 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr2-11738 chr2 11007744 11007954 + 5.18 0.000 Intergenic Intergenic 95915 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr12-7754 chr12 94661831 94662041 + 5.18 0.000 Intergenic Intergenic -11379 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr17-5444 chr17 39239720 39239930 + 5.18 0.000 Intergenic Intergenic -13880 NM_198993 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr17-7063 chr17 64658870 64659080 + 5.18 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 3332 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chrX-3955 chrX 11498335 11498545 + 5.18 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) -70622 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr14-4982 chr14 75548815 75549025 + 5.18 0.000 Intergenic Intergenic 26451 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr14-5105 chr14 88687925 88688135 + 5.18 0.000 intron (NM_183387, intron 18 of 42) AluJo|SINE|Alu 93610 NM_207662 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr22-3657 chr22 22749377 22749587 + 5.18 0.000 Intergenic ERVL-B4-int|LTR|ERVL -73294 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr7-4970 chr7 150414048 150414258 + 5.18 0.000 Intergenic Intergenic 8401 NR_027237 728743 Hs.650365 NM_001080852 LOC728743 - zinc finger protein pseudogene pseudo chrX-1757 chrX 54138411 54138621 + 5.18 0.000 intron (NM_001300788, intron 4 of 13) AluJb|SINE|Alu 44738 NM_017848 54954 Hs.86045 NM_017848 ENSG00000184083 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding chr3-10611 chr3 145288479 145288689 + 5.18 0.000 Intergenic L1MA5|LINE|L1 780601 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr13-3609 chr13 29419367 29419577 + 5.18 0.000 intron (NM_001033602, intron 6 of 13) ERVL-B4-int|LTR|ERVL -9188 NM_015233 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr12-7391 chr12 57266648 57266858 + 5.18 0.000 exon (NM_001351209, exon 19 of 24) exon (NM_001351209, exon 19 of 24) -15566 NM_001286257 246329 Hs.417595 NM_145064 ENSG00000185482 STAC3 MYPBB|NAM SH3 and cysteine rich domain 3 protein-coding chr5-8111 chr5 97896253 97896463 + 5.18 0.000 intron (NR_146299, intron 2 of 2) L1MC3|LINE|L1 55600 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA chr8-6199 chr8 35613876 35614086 + 5.18 0.000 intron (NM_001322818, intron 4 of 16) intron (NM_001322818, intron 4 of 16) 69589 NM_001322818 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr16-6633 chr16 68047561 68047771 + 5.18 0.000 intron (NM_017803, intron 3 of 16) AluSz|SINE|Alu -23799 NM_018380 55794 Hs.458313 NM_018380 ENSG00000182810 DDX28 MDDX28 DEAD-box helicase 28 protein-coding chr8-4986 chr8 139991552 139991762 + 5.18 0.000 intron (NM_001160372, intron 18 of 22) intron (NM_001160372, intron 18 of 22) 108878 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr2-9700 chr2 47545812 47546022 + 5.18 0.000 intron (NM_022055, intron 1 of 1) intron (NM_022055, intron 1 of 1) 18380 NR_120602 644093 Hs.734158 NR_120602 ENSG00000235760 HCG2040054 - uncharacterized LOC644093 ncRNA chr4-7410 chr4 65194805 65195015 + 5.18 0.000 Intergenic MER52D|LTR|ERV1 -190410 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr20-4429 chr20 60791259 60791469 + 5.18 0.000 Intergenic Intergenic 226802 NR_039653 100616440 NR_039653 ENSG00000265617 MIR548AG2 - microRNA 548ag-2 ncRNA chr21-1869 chr21 42575881 42576091 + 5.18 0.000 intron (NM_001320537, intron 18 of 19) L1MEd|LINE|L1 39109 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chr16-4362 chr16 46837959 46838169 + 5.18 0.000 Intergenic AluSc|SINE|Alu -6884 NM_001348660 388272 Hs.406551 NM_001001436 ENSG00000155330 C16orf87 - chromosome 16 open reading frame 87 protein-coding chr9-7316 chr9 11149721 11149931 + 5.18 0.000 Intergenic MIRc|SINE|MIR 536620 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr13-3025 chr13 21528500 21528710 + 5.18 0.000 intron (NM_152726, intron 4 of 11) L2c|LINE|L2 -69235 NM_001286638 253832 Hs.564611 NM_153251 ENSG00000180776 ZDHHC20 4933421L13Rik|DHHC-20|DHHC20 zinc finger DHHC-type containing 20 protein-coding chr12-4029 chr12 42861427 42861637 + 5.18 0.000 Intergenic Intergenic 169316 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr7-9425 chr7 133328747 133328957 + 5.18 0.000 intron (NM_021807, intron 5 of 17) L1P2|LINE|L1 37971 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chr4-5225 chr4 168098396 168098606 + 5.18 0.000 intron (NM_007193, intron 1 of 11) intron (NM_007193, intron 1 of 11) 5964 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr8-4753 chr8 142840148 142840358 + 5.18 0.000 intron (NM_002066, intron 1 of 3) intron (NM_002066, intron 1 of 3) 5452 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr4-8626 chr4 173318690 173318900 + 5.18 0.000 intron (NM_017423, intron 11 of 11) intron (NM_017423, intron 11 of 11) 14974 NM_001130689 3148 Hs.434953 NM_002129 ENSG00000164104 HMGB2 HMG2 high mobility group box 2 protein-coding chr22-3638 chr22 21923034 21923244 + 5.18 0.000 exon (NM_014634, exon 8 of 8) exon (NM_014634, exon 8 of 8) -15098 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr11-2889 chr11 45594309 45594519 + 5.18 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 71208 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr15-5010 chr15 81573211 81573421 + 5.18 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -199103 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr5-4365 chr5 170862280 170862490 + 5.18 0.000 intron (NM_022897, intron 1 of 27) CpG 367 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chr12-6404 chr12 75068202 75068412 + 5.18 0.000 intron (NM_001260499, intron 2 of 3) intron (NM_001260499, intron 2 of 3) 141441 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding chr19-6624 chr19 30895294 30895504 + 5.18 0.000 Intergenic Intergenic -272111 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr16-6415 chr16 55716937 55717147 + 5.18 0.000 Intergenic MER21-int|LTR|ERVL -7883 NR_033740 390732 Hs.554599 NR_033740 CES1P2 - carboxylesterase 1 pseudogene 2 pseudo chr3-10713 chr3 153562186 153562396 + 5.18 0.000 intron (NR_146713, intron 4 of 6) MLT1F2|LTR|ERVL-MaLR 77796 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr6-6066 chr6 137606012 137606222 + 5.18 0.000 Intergenic Intergenic -59529 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr6-8564 chr6 163489682 163489892 + 5.18 0.000 intron (NM_206853, intron 3 of 6) MER105|DNA|hAT-Charlie 75069 NM_006775 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr4-7159 chr4 38993871 38994081 + 5.18 0.000 exon (NM_024943, exon 3 of 7) exon (NM_024943, exon 3 of 7) 38433 NM_001303228 80008 Hs.374147 NM_024943 ENSG00000121895 TMEM156 - transmembrane protein 156 protein-coding chr20-3720 chr20 16885382 16885592 + 5.18 0.000 Intergenic AluSz6|SINE|Alu 137134 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr5-7075 chr5 173463907 173464117 + 5.18 0.000 Intergenic AluSz|SINE|Alu -115622 NR_027109 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr1-14817 chr1 72790947 72791157 + 5.18 0.000 Intergenic LTR52|LTR|ERVL -508513 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr6-8067 chr6 122902636 122902846 + 5.18 0.000 Intergenic Intergenic -93494 NM_001010852 134829 Hs.486361 NM_001010852 ENSG00000146352 CLVS2 C6orf212|C6orf213|RLBP1L2|bA160A10.4 clavesin 2 protein-coding chr22-4106 chr22 43654424 43654634 + 5.18 0.000 intron (NM_198856, intron 15 of 29) L1MC3|LINE|L1 138275 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr6-7924 chr6 109507958 109508168 + 5.18 0.000 intron (NM_001145128, intron 33 of 40) MER57A1|LTR|ERV1 -24826 NM_014797 9841 Hs.409876 NM_014797 ENSG00000112365 ZBTB24 BIF1|ICF2|PATZ2|ZNF450 zinc finger and BTB domain containing 24 protein-coding chr9-6114 chr9 4729840 4730050 + 5.18 0.000 intron (NM_001199853, intron 1 of 4) L1MB7|LINE|L1 -3718 NM_001199856 50808 Hs.732022 NM_016282 ENSG00000147853 AK3 AK3L1|AK6|AKL3L|AKL3L1|FIX adenylate kinase 3 protein-coding chr15-3108 chr15 64877613 64877823 + 5.18 0.000 Intergenic Intergenic -34184 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr12-6847 chr12 15165981 15166191 + 5.18 0.000 intron (NM_032918, intron 2 of 4) intron (NM_032918, intron 2 of 4) 14163 NR_046559 100873980 Hs.569154 NR_046559 ENSG00000255660 RERG-AS1 - RERG antisense RNA 1 ncRNA chr4-6964 chr4 20422911 20423121 + 5.18 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) 30827 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr4-8750 chr4 186105129 186105339 + 5.18 0.000 exon (NM_001367768, exon 1 of 14) exon (NM_001367768, exon 1 of 14) 530 NM_001367768 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr11-7351 chr11 66901236 66901446 + 5.18 0.000 intron (NM_001040716, intron 3 of 22) LTR33A|LTR|ERVL 6612 NM_022172 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding chr20-4445 chr20 61874587 61874797 + 5.18 0.000 intron (NM_001252339, intron 6 of 14) intron (NM_001252339, intron 6 of 14) 78970 NR_031658 100302168 NR_031658 ENSG00000284193 MIR1257 MIRN1257|hsa-mir-1257 microRNA 1257 ncRNA chr3-11141 chr3 188213478 188213688 + 5.18 0.000 intron (NM_005578, intron 1 of 10) MIR3|SINE|MIR 650 NM_005578 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr12-5810 chr12 24671117 24671327 + 5.18 0.000 Intergenic L2a|LINE|L2 -87054 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr4-4273 chr4 24070412 24070622 + 5.18 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -180470 NM_001354828 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr5-7542 chr5 38377589 38377799 + 5.18 0.000 intron (NM_152403, intron 6 of 21) intron (NM_152403, intron 6 of 21) 25777 NR_102749 100506475 Hs.662304 NR_102749 ENSG00000248572 EGFLAM-AS2 - EGFLAM antisense RNA 2 ncRNA chr3-10138 chr3 114158922 114159132 + 5.18 0.000 intron (NM_000796, intron 3 of 6) G-rich|Low_complexity|Low_complexity 19749 NM_001290809 1814 Hs.121478 NM_000796 ENSG00000151577 DRD3 D3DR|ETM1|FET1 dopamine receptor D3 protein-coding chrX-5359 chrX 149714918 149715128 + 5.18 0.000 intron (NM_001011544, intron 3 of 4) intron (NM_001011544, intron 3 of 4) 2963 NM_005366 4110 Hs.670252 NM_005366 ENSG00000185247 MAGEA11 CT1.11|MAGE-11|MAGE11|MAGEA-11 MAGE family member A11 protein-coding chr7-8644 chr7 70604285 70604495 + 5.18 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -527754 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr1-8513 chr1 154735724 154735934 + 5.18 0.000 intron (NM_170782, intron 3 of 7) intron (NM_170782, intron 3 of 7) -107832 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr3-4796 chr3 124945456 124945666 + 5.18 0.000 Intergenic L1ME4a|LINE|L1 -10810 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr17-7704 chr17 32157523 32157733 + 5.18 0.000 intron (NM_001288755, intron 1 of 18) AluSg|SINE|Alu -6057 NR_002222 503640 Hs.631752 NR_002222 ARGFXP2 - arginine-fifty homeobox pseudogene 2 pseudo chr16-6103 chr16 12945892 12946102 + 5.18 0.000 intron (NM_001145204, intron 2 of 4) AluSz6|SINE|Alu 44399 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr18-3346 chr18 57425866 57426076 + 5.18 0.000 Intergenic AluSx|SINE|Alu -9403 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr2-14209 chr2 208948141 208948351 + 5.18 0.000 Intergenic Intergenic 405604 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr4-6753 chr4 6204207 6204417 + 5.18 0.000 intron (NR_037863, intron 1 of 3) Arthur1|DNA|hAT-Tip100 3579 NR_037863 285484 Hs.479068 NR_037863 LINC02495 - long intergenic non-protein coding RNA 2495 ncRNA chr2-14103 chr2 200694052 200694262 + 5.18 0.000 Intergenic L3|LINE|CR1 -1566 NR_135012 107161151 Hs.148269 NR_135011 AOX3P-AOX2P AOX3/AOX3L1 AOX3P-AOX2P readthrough, transcribed pseudogene pseudo chr2-8558 chr2 134178242 134178452 + 5.18 0.000 intron (NM_001371457, intron 1 of 16) LTR33A|LTR|ERVL 51222 NR_037450 100500878 NR_037450 ENSG00000263813 MIR3679 mir-3679 microRNA 3679 ncRNA chr1-8700 chr1 226701886 226702096 + 5.18 0.000 intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) -26923 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr6-7861 chr6 106173561 106173771 + 5.18 0.000 Intergenic L1ME4b|LINE|L1 74725 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr13-3625 chr13 30364864 30365074 + 5.18 0.000 intron (NR_024464, intron 3 of 4) intron (NR_024464, intron 3 of 4) 8945 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr8-3917 chr8 41687795 41688005 + 5.18 0.000 intron (NM_020475, intron 35 of 41) intron (NM_020475, intron 35 of 41) -22626 NM_020480 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr19-7038 chr19 50780904 50781114 + 5.18 0.000 intron (NR_134883, intron 3 of 3) intron (NR_134883, intron 3 of 3) 5201 NR_134884 105372440 Hs.606943 NR_134883 ENSG00000261341 LOC105372440 - uncharacterized LOC105372440 ncRNA chr8-7509 chr8 143355024 143355234 + 5.18 0.000 intron (NM_001258447, intron 1 of 13) intron (NM_001258447, intron 1 of 13) 4848 NM_001258446 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr20-3835 chr20 24577055 24577265 + 5.18 0.000 intron (NM_024893, intron 2 of 3) intron (NM_024893, intron 2 of 3) 107199 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr3-8769 chr3 3615133 3615343 + 5.18 0.000 Intergenic MIRb|SINE|MIR -184193 NM_001324189 57633 Hs.163244 NM_020873 ENSG00000175928 LRRN1 FIGLER3|NLRR-1 leucine rich repeat neuronal 1 protein-coding chr15-2913 chr15 43958920 43959130 + 5.18 0.000 intron (NM_032892, intron 1 of 13) intron (NM_032892, intron 1 of 13) -80854 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr5-6391 chr5 142151742 142151952 + 5.18 0.000 3' UTR (NM_030571, exon 8 of 8) 3' UTR (NM_030571, exon 8 of 8) 43068 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr1-7866 chr1 100023926 100024136 + 5.18 0.000 3' UTR (NM_012243, exon 8 of 8) 3' UTR (NM_012243, exon 8 of 8) -14064 NM_033055 64645 Hs.124156 NM_033055 ENSG00000156875 MFSD14A HIAT1 major facilitator superfamily domain containing 14A protein-coding chrX-2967 chrX 18684493 18684703 + 5.18 0.000 Intergenic Intergenic -6328 NM_006240 5475 Hs.211589 NM_006240 ENSG00000086717 PPEF1 PP7|PPEF|PPP7C|PPP7CA protein phosphatase with EF-hand domain 1 protein-coding chr20-3012 chr20 48551680 48551890 + 5.18 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 191874 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr6-5770 chr6 166717608 166717818 + 5.18 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -90462 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr5-8917 chr5 157345047 157345257 + 5.18 0.000 intron (NM_001001343, intron 1 of 1) intron (NM_001001343, intron 1 of 1) 525 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr9-7995 chr9 93706968 93707178 + 5.18 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 112232 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr6-8052 chr6 121285209 121285419 + 5.18 0.000 intron (NR_104452, intron 12 of 35) MER68|LTR|ERVL 49166 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr7-7147 chr7 4094148 4094358 + 5.18 0.000 intron (NM_152744, intron 22 of 44) AluSx1|SINE|Alu -35432 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr16-5753 chr16 86469000 86469210 + 5.18 0.000 Intergenic AluSx|SINE|Alu 39755 NR_036444 400550 Hs.448825 NR_033925 ENSG00000268388 FENDRR FOXF1-AS1|FOXF1AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21 FOXF1 adjacent non-coding developmental regulatory RNA ncRNA chr8-6734 chr8 87642423 87642633 + 5.18 0.000 Intergenic L1MC4|LINE|L1 231487 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr10-7789 chr10 36200620 36200830 + 5.18 0.000 Intergenic L1MC1|LINE|L1 422423 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr4-5780 chr4 77527190 77527400 + 5.18 0.000 intron (NM_006419, intron 1 of 4) L1MD1|LINE|L1 15542 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr18-1671 chr18 68182311 68182521 + 5.18 0.000 Intergenic Intergenic -367594 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr12-4160 chr12 85626483 85626693 + 5.18 0.000 Intergenic Intergenic 209821 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr11-10324 chr11 109423377 109423587 + 5.18 0.000 5' UTR (NM_207645, exon 2 of 2) 5' UTR (NM_207645, exon 2 of 2) 1292 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr4-5512 chr4 89452628 89452838 + 5.18 0.000 Intergenic L1MC2|LINE|L1 -144933 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr9-8069 chr9 98068766 98068976 + 5.18 0.000 intron (NM_018946, intron 2 of 5) L1MD2|LINE|L1 12139 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr9-7819 chr9 81724577 81724787 + 5.18 0.000 intron (NR_109772, intron 1 of 3) L3b|LINE|CR1 34969 NR_109772 101927502 Hs.528628 NR_109772 ENSG00000233926 LOC101927502 - uncharacterized LOC101927502 ncRNA chrX-3191 chrX 43104638 43104848 + 5.18 0.000 Intergenic Intergenic -72251 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr6-7991 chr6 115654784 115654994 + 5.18 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger -11054 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr10-7220 chr10 118245364 118245574 + 5.18 0.000 Intergenic (TTGTT)n|Simple_repeat|Simple_repeat 96855 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr3-5259 chr3 109323008 109323218 + 5.18 0.000 Intergenic Intergenic -6596 NM_138815 151871 Hs.351113 NM_138815 ENSG00000163530 DPPA2 CT100|ECAT15-2|PESCRG1 developmental pluripotency associated 2 protein-coding chr17-7362 chr17 7052025 7052235 + 5.18 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -8038 NM_001370553 162515 Hs.336564 NM_153357 ENSG00000174326 SLC16A11 MCT 11|MCT11 solute carrier family 16 member 11 protein-coding chr1-15003 chr1 92022454 92022664 + 5.18 0.000 Intergenic AluSz|SINE|Alu -7426 NM_173567 253152 Hs.201555 NM_173567 ENSG00000172031 EPHX4 ABHD7|EH4|EPHXRP epoxide hydrolase 4 protein-coding chrX-5326 chrX 145939558 145939768 + 5.18 0.000 Intergenic HERVL-int|LTR|ERVL 53163 NR_106783 102466721 NR_106783 ENSG00000252219 MIR892C hsa-mir-892c microRNA 892c ncRNA chr2-10291 chr2 131202171 131202381 + 5.18 0.000 Intergenic Intergenic -16075 NM_001083538 445582 Hs.686146 NM_001004054 ENSG00000188219 POTEE A26C1|A26C1A|CT104.2|POTE-2|POTE2|POTE2gamma POTE ankyrin domain family member E protein-coding chr8-7046 chr8 113591719 113591929 + 5.18 0.000 Intergenic Intergenic -154885 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr6-7746 chr6 91857971 91858181 + 5.18 0.000 Intergenic L1ME3B|LINE|L1 -167648 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA chr2-12102 chr2 34081179 34081389 + 5.18 0.000 intron (NR_126403, intron 4 of 5) L1MB8|LINE|L1 14058 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr15-2387 chr15 57629099 57629309 + 5.18 0.000 intron (NM_001018100, intron 5 of 12) L1ME4a|LINE|L1 37300 NR_104371 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr15-3426 chr15 90413366 90413576 + 5.18 0.000 intron (NM_003870, intron 2 of 37) MER84|LTR|ERV1 25229 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr5-7259 chr5 11779996 11780206 + 5.18 0.000 intron (NM_001288717, intron 1 of 20) intron (NM_001288717, intron 1 of 20) 124345 NR_109988 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr3-9006 chr3 18576361 18576571 + 5.18 0.000 Intergenic Intergenic -130874 NM_001322872 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr6-5966 chr6 84417472 84417682 + 5.18 0.000 Intergenic AluSx1|SINE|Alu 57352 NR_132100 105377880 Hs.171384 NR_132100 ENSG00000231776 LINC01611 TCONS_l2_00025430 long intergenic non-protein coding RNA 1611 ncRNA chr16-5401 chr16 89014182 89014392 + 5.18 0.000 Intergenic Intergenic -37080 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr4-6433 chr4 134153336 134153546 + 5.18 0.000 Intergenic Intergenic 48348 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr6-6708 chr6 806852 807062 + 5.18 0.000 Intergenic Intergenic -61541 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr10-6755 chr10 133103427 133103637 + 5.18 0.000 intron (NM_001083909, intron 5 of 6) intron (NM_001083909, intron 5 of 6) 1286 NM_001291085 84435 Hs.435183 NM_032422 ENSG00000197177 ADGRA1 GPR123 adhesion G protein-coupled receptor A1 protein-coding chrX-4716 chrX 88237009 88237219 + 5.18 0.000 Intergenic L1PA13|LINE|L1 -510111 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr3-8271 chr3 52619094 52619304 + 5.18 0.000 intron (NM_001366074, intron 16 of 30) intron (NM_001366074, intron 16 of 30) 66400 NM_001350074 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding chr1-13100 chr1 185192353 185192563 + 5.18 0.000 intron (NM_017673, intron 10 of 18) FLAM_A|SINE|Alu 35291 NM_017673 54823 Hs.134183 NM_017673 ENSG00000116668 SWT1 C1orf26|HsSwt1 SWT1 RNA endoribonuclease homolog protein-coding chr4-6713 chr4 3789476 3789686 + 5.18 0.000 Intergenic Intergenic 23196 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr9-5320 chr9 87122081 87122291 + 5.18 0.000 Intergenic Intergenic -26458 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA chr16-6816 chr16 80706866 80707076 + 5.18 0.000 intron (NM_152342, intron 1 of 6) intron (NM_152342, intron 1 of 6) 97627 NM_152342 124359 Hs.60257 NM_152342 ENSG00000166446 CDYL2 PCCP1 chromodomain Y like 2 protein-coding chr18-3136 chr18 39324677 39324887 + 5.18 0.000 intron (NR_024391, intron 3 of 3) (AC)n|Simple_repeat|Simple_repeat 297393 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr19-3134 chr19 18033869 18034079 + 5.18 0.000 Intergenic AluSx|SINE|Alu 25804 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr15-4631 chr15 62947034 62947244 + 5.18 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -95608 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr10-8569 chr10 95297407 95297617 + 5.18 0.000 Intergenic Intergenic -6509 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr3-7753 chr3 62690756 62690966 + 5.18 0.000 intron (NM_003716, intron 3 of 29) L1MC1|LINE|L1 184555 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr10-7931 chr10 52120904 52121114 + 5.18 0.000 intron (NM_001098512, intron 7 of 17) MSTD-int|LTR|ERVL-MaLR 193119 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA chr1-10207 chr1 113302070 113302280 + 5.18 0.000 Intergenic Intergenic -88340 NM_001142782 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chrX-4539 chrX 68752851 68753061 + 5.18 0.000 Intergenic MamRTE1|LINE|RTE-BovB 59317 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr10-6637 chr10 100047139 100047349 + 5.18 0.000 intron (NM_001308, intron 8 of 8) (AGG)n|Simple_repeat|Simple_repeat 34625 NM_001308 1369 Hs.2246 NM_001308 ENSG00000120054 CPN1 CPN|SCPN carboxypeptidase N subunit 1 protein-coding chrX-3159 chrX 23340246 23340456 + 5.18 0.000 intron (NM_173495, intron 1 of 2) intron (NM_173495, intron 1 of 2) 5502 NM_173495 139411 Hs.319503 NM_173495 ENSG00000165186 PTCHD1 AUTSX4 patched domain containing 1 protein-coding chr10-7801 chr10 37680223 37680433 + 5.18 0.000 Intergenic CpG -77397 NM_001190489 100288485 Hs.727092 NM_001190489 ENSG00000256892 MTRNR2L7 HN7 MT-RNR2 like 7 protein-coding chr11-10754 chr11 133760642 133760852 + 5.18 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 49629 NR_120444 646522 Hs.560000 NR_120444 ENSG00000255258 LINC02743 - long intergenic non-protein coding RNA 2743 ncRNA chrX-1185 chrX 56762903 56763113 + 5.18 0.000 intron (NM_001348129, intron 2 of 2) intron (NM_001348129, intron 2 of 2) -25424 NR_002308 442454 Hs.663220 NR_002308 UQCRBP1 - ubiquinol-cytochrome c reductase binding protein pseudogene 1 pseudo chr12-6610 chr12 127820404 127820614 + 5.18 0.000 Intergenic Intergenic -61108 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chr7-3424 chr7 149148043 149148253 + 5.18 0.000 intron (NM_170686, intron 1 of 5) CpG 695 NM_170686 57541 Hs.632032 NM_020781 ENSG00000197024 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding chr3-11097 chr3 185668695 185668905 + 5.18 0.000 intron (NR_138486, intron 9 of 15) MIR|SINE|MIR -44452 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr20-1450 chr20 58159085 58159295 + 5.18 0.000 intron (NM_178456, intron 3 of 3) (T)n|Simple_repeat|Simple_repeat 8288 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr3-9113 chr3 29768635 29768845 + 5.18 0.000 intron (NM_001003792, intron 6 of 13) LTR16E1|LTR|ERVL 165416 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr5-7991 chr5 84747138 84747348 + 5.18 0.000 Intergenic Intergenic -362363 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr10-7531 chr10 14529378 14529588 + 5.18 0.000 intron (NM_001282699, intron 2 of 3) intron (NM_001282699, intron 2 of 3) 3231 NM_001320741 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr1-10679 chr1 186392502 186392712 + 5.18 0.000 intron (NM_001164245, intron 8 of 12) AluSx1|SINE|Alu -7965 NM_022375 10896 Hs.679230 NM_022375 ENSG00000262180 OCLM TISR oculomedin protein-coding chr2-13326 chr2 132750623 132750833 + 5.18 0.000 intron (NM_207481, intron 14 of 17) intron (NM_207481, intron 14 of 17) -79202 NM_001077427 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr12-4934 chr12 69258638 69258848 + 5.18 0.000 exon (NM_001300947, exon 7 of 11) exon (NM_001300947, exon 7 of 11) 14475 NR_031692 100302182 NR_031692 ENSG00000283476 MIR1279 MIRN1279|hsa-mir-1279 microRNA 1279 ncRNA chr3-7366 chr3 53492878 53493088 + 5.18 0.000 Intergenic Intergenic -1628 NM_001128840 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr8-5768 chr8 142067465 142067675 + 5.18 0.000 Intergenic L1PA8|LINE|L1 -108769 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr12-5836 chr12 40790014 40790224 + 5.18 0.000 intron (NM_001256063, intron 1 of 15) intron (NM_001256063, intron 1 of 15) -37819 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr5-8050 chr5 92159655 92159865 + 5.18 0.000 Intergenic Intergenic -776443 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr1-7913 chr1 156642077 156642287 + 5.18 0.000 promoter-TSS (NM_198427) promoter-TSS (NM_198427) 65 NM_198427 63827 Hs.516904 NM_021948 ENSG00000132692 BCAN BEHAB|CSPG7 brevican protein-coding chr8-4799 chr8 3734267 3734477 + 5.18 0.000 intron (NM_033225, intron 6 of 69) intron (NM_033225, intron 6 of 69) -1005921 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr2-14127 chr2 202335512 202335722 + 5.18 0.000 Intergenic Intergenic -40710 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr6-8596 chr6 166768266 166768476 + 5.18 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 94154 NM_001318937 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr1-12896 chr1 111809725 111809935 + 5.18 0.000 intron (NM_172198, intron 2 of 6) L2b|LINE|L2 47075 NR_046783 100874295 Hs.738190 NR_046783 ENSG00000232558 KCND3-IT1 - KCND3 intronic transcript 1 ncRNA chr7-7019 chr7 129527032 129527242 + 5.18 0.000 Intergenic Intergenic 24606 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr11-5924 chr11 14679501 14679711 + 5.18 0.000 intron (NM_000922, intron 1 of 15) MER51-int|LTR|ERV1 35802 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr1-9828 chr1 61083813 61084023 + 5.18 0.000 intron (NM_001134673, intron 1 of 10) intron (NM_001134673, intron 1 of 10) 1357 NM_005595 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr4-8597 chr4 169902454 169902664 + 5.18 0.000 Intergenic Intergenic 73343 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr8-6477 chr8 62609905 62610115 + 5.18 0.000 intron (NM_001304533, intron 3 of 6) L2a|LINE|L2 361156 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr1-16095 chr1 203430690 203430900 + 5.18 0.000 Intergenic AluJo|SINE|Alu -45011 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chrX-4069 chrX 20802842 20803052 + 5.18 0.000 Intergenic Intergenic -536038 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr6-8135 chr6 129242900 129243110 + 5.18 0.000 intron (NM_000426, intron 12 of 64) intron (NM_000426, intron 12 of 64) 359864 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr3-7760 chr3 65927982 65928192 + 5.18 0.000 intron (NR_145422, intron 1 of 2) L2a|LINE|L2 26471 NR_145422 151877 Hs.476636 NR_145422 ENSG00000272610 MAGI1-IT1 - MAGI1 intronic transcript 1 ncRNA chr10-7296 chr10 131732431 131732641 + 5.18 0.000 Intergenic (CACA)n|Simple_repeat|Simple_repeat 57663 NR_038365 399827 Hs.523353 NM_001001677 ENSG00000189275 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA chr10-7107 chr10 96974348 96974558 + 5.18 0.000 intron (NM_001346516, intron 7 of 7) intron (NM_001346516, intron 7 of 7) -128303 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr2-4568 chr2 74303041 74303251 + 5.18 0.000 intron (NM_133478, intron 7 of 30) intron (NM_133478, intron 7 of 30) 11879 NM_021196 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chr17-5049 chr17 2541416 2541626 + 5.18 0.000 Intergenic Intergenic -29633 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr1-13273 chr1 227690883 227691093 + 5.18 0.000 Intergenic L1M3de|LINE|L1 6719 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo chr20-2129 chr20 34862460 34862670 + 5.18 0.000 intron (NM_178026, intron 3 of 14) intron (NM_178026, intron 3 of 14) 10291 NM_178026 2686 Hs.433738 NM_178026 ENSG00000131067 GGT7 D20S101|GGT4|GGTL3|GGTL5 gamma-glutamyltransferase 7 protein-coding chr12-7554 chr12 71990038 71990248 + 5.18 0.000 intron (NM_173353, intron 7 of 10) intron (NM_173353, intron 7 of 10) 51298 NM_173353 121278 Hs.736576 NM_173353 ENSG00000139287 TPH2 ADHD7|NTPH tryptophan hydroxylase 2 protein-coding chr16-6530 chr16 63422081 63422291 + 5.18 0.000 Intergenic Intergenic -1385748 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr16-5176 chr16 5235566 5235776 + 5.18 0.000 Intergenic LTR16C|LTR|ERVL -137851 NM_001289029 196483 Hs.406461 NM_201400 ENSG00000118894 EEF2KMT EFM3|FAM86A|SB153|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding chrX-4422 chrX 53919507 53919717 + 5.18 0.000 Intergenic LTR42|LTR|ERVL 123535 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr13-3339 chr13 70792296 70792506 + 5.18 0.000 Intergenic Intergenic -222740 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr2-12780 chr2 85950510 85950720 + 5.18 0.000 Intergenic LTR85a|LTR|Gypsy? 61335 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr1-16000 chr1 197426170 197426380 + 5.18 0.000 intron (NM_001257966, intron 6 of 9) L2a|LINE|L2 158023 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr8-4262 chr8 93525007 93525217 + 5.18 0.000 intron (NR_033858, intron 7 of 10) ERV3-16A3_I-int|LTR|ERVL 175321 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr13-1394 chr13 113509072 113509282 + 5.18 0.000 intron (NM_001349746, intron 6 of 10) intron (NM_001349746, intron 6 of 10) 18156 NM_017905 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr19-5542 chr19 52963337 52963547 + 5.18 0.000 promoter-TSS (NM_001202473) promoter-TSS (NM_001202473) -531 NM_001202473 100529240 Hs.675715 NM_001202473 ENSG00000221874 ZNF816-ZNF321P ZNF816-ZNF321 ZNF816-ZNF321P readthrough protein-coding chr1-12960 chr1 153497752 153497962 + 5.18 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -37206 NM_002963 6278 Hs.112408 NM_002963 ENSG00000143556 S100A7 PSOR1|S100A7c S100 calcium binding protein A7 protein-coding chr8-7253 chr8 128314435 128314645 + 5.18 0.000 Intergenic L1MC5a|LINE|L1 164424 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr4-8345 chr4 147069184 147069394 + 5.18 0.000 Intergenic Intergenic -123403 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr13-2188 chr13 20092363 20092573 + 5.18 0.000 TTS (NM_001353161) TTS (NM_001353161) -10233 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr19-4244 chr19 53538253 53538463 + 5.18 0.000 promoter-TSS (NM_001253800) promoter-TSS (NM_001253800) 213 NM_001317115 55422 Hs.185674 NM_018555 ENSG00000130844 ZNF331 RITA|ZNF361|ZNF463 zinc finger protein 331 protein-coding chr2-10199 chr2 98882155 98882365 + 5.18 0.000 intron (NM_207362, intron 1 of 9) intron (NM_207362, intron 1 of 9) 53965 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr9-4112 chr9 132521346 132521556 + 5.18 0.000 intron (NM_207417, intron 4 of 6) L2c|LINE|L2 -61155 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr19-4836 chr19 37294342 37294552 + 5.18 0.000 Intergenic SST1|Satellite|centr -18390 NR_138103 284459 Hs.640243 NM_181786 ENSG00000181666 ZNF875 HKR1 zinc finger protein 875 protein-coding chr8-6228 chr8 38317971 38318181 + 5.18 0.000 intron (NM_017778, intron 9 of 9) intron (NM_017778, intron 9 of 9) -48844 NM_001354454 84513 Hs.567619 NM_032483 ENSG00000147535 PLPP5 DPPL1|HTPAP|PPAPDC1B phospholipid phosphatase 5 protein-coding chr8-5878 chr8 15241255 15241465 + 5.18 0.000 Intergenic Intergenic -2929 NM_139167 137868 Hs.545526 NM_139167 ENSG00000185053 SGCZ ZSG1 sarcoglycan zeta protein-coding chr6-3464 chr6 364849 365059 + 5.18 0.000 Intergenic Intergenic -26798 NR_046000 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chrX-3273 chrX 98730408 98730618 + 5.18 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -1165978 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr9-4159 chr9 5493878 5494088 + 5.18 0.000 Intergenic Intergenic -16548 NM_025239 80380 Hs.532279 NM_025239 ENSG00000197646 PDCD1LG2 B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2 programmed cell death 1 ligand 2 protein-coding chr7-8846 chr7 87539195 87539405 + 5.18 0.000 exon (NM_001348946, exon 19 of 28) exon (NM_001348946, exon 19 of 28) 61584 NM_001348946 5243 Hs.489033 NM_000927 ENSG00000085563 ABCB1 ABC20|CD243|CLCS|GP170|MDR1|P-GP|PGY1 ATP binding cassette subfamily B member 1 protein-coding chr4-8251 chr4 139620756 139620966 + 5.18 0.000 Intergenic Intergenic -44907 NM_001204367 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr4-8318 chr4 144945207 144945417 + 5.18 0.000 Intergenic Intergenic 152070 NM_001318367 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr16-4213 chr16 12676296 12676506 + 5.18 0.000 intron (NM_001099455, intron 2 of 2) intron (NM_001099455, intron 2 of 2) -43920 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr14-4897 chr14 72421659 72421869 + 5.18 0.000 intron (NM_001370288, intron 3 of 16) intron (NM_001370288, intron 3 of 16) -95056 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr2-10674 chr2 22982374 22982584 + 5.18 0.000 Intergenic Intergenic -402700 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chrX-1254 chrX 101073485 101073695 + 5.18 0.000 Intergenic AluSp|SINE|Alu -5289 NM_021637 59353 Hs.45140 NM_021637 ENSG00000126950 TMEM35A TMEM35 transmembrane protein 35A protein-coding chr5-9189 chr5 179176470 179176680 + 5.18 0.000 intron (NM_014244, intron 5 of 21) L2b|LINE|L2 116202 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr1-12409 chr1 10423930 10424140 + 5.18 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -6398 NM_198544 100526739 Hs.412311 NM_198544 ENSG00000251503 CENPS-CORT APITD1|APITD1-CORT|CENP-S|CENPS|FAAP16|MHF1 CENPS-CORT readthrough protein-coding chr22-2399 chr22 15761378 15761588 + 5.18 0.000 intron (NR_132385, intron 2 of 2) intron (NR_132385, intron 2 of 2) 14809 NR_132385 106146148 Hs.435289 NR_132385 ENSG00000225255 LINC01297 LA16c-83F12.6 long intergenic non-protein coding RNA 1297 ncRNA chr12-6477 chr12 101444162 101444372 + 5.18 0.000 Intergenic AluJb|SINE|Alu -31069 NM_152323 121599 Hs.577097 NM_152323 ENSG00000166211 SPIC SPI-C Spi-C transcription factor protein-coding chr7-4844 chr7 102577935 102578145 + 5.18 0.000 Intergenic Intergenic -5419 NM_001097615 548644 Hs.610255 NM_001015884 ENSG00000168255 POLR2J3 POLR2J2|RPB11b1|RPB11b2 RNA polymerase II subunit J3 protein-coding chr7-9685 chr7 153218334 153218544 + 5.18 0.000 Intergenic MLT2B2|LTR|ERVL 193795 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr10-9000 chr10 121436194 121436404 + 5.18 0.000 Intergenic Intergenic 95015 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr18-1843 chr18 23205016 23205226 + 5.18 0.000 intron (NM_001256438, intron 3 of 9) intron (NM_001256438, intron 3 of 9) 49296 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr4-7742 chr4 92802846 92803056 + 5.18 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 498552 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr1-15582 chr1 160122252 160122462 + 5.18 0.000 intron (NM_000702, intron 3 of 22) L2a|LINE|L2 6598 NM_000702 477 Hs.34114 NM_000702 ENSG00000018625 ATP1A2 FHM2|MHP2 ATPase Na+/K+ transporting subunit alpha 2 protein-coding chrX-4564 chrX 69992096 69992306 + 5.18 0.000 intron (NM_001005609, intron 2 of 7) L1MDb|LINE|L1 -30656 NR_037494 100500887 NR_037494 ENSG00000211991 MIR676 hsa-mir-676|mir-676 microRNA 676 ncRNA chr3-9009 chr3 18811911 18812121 + 5.18 0.000 Intergenic Intergenic -336494 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chrX-4066 chrX 20252997 20253207 + 5.18 0.000 intron (NM_004586, intron 1 of 21) L1MD2|LINE|L1 13807 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr5-8122 chr5 98791781 98791991 + 5.18 0.000 intron (NM_001366510, intron 4 of 4) intron (NM_001366510, intron 4 of 4) 18223 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr7-6367 chr7 150901737 150901947 + 5.18 0.000 Intergenic Intergenic 49325 NM_001272072 26 Hs.647097 NM_001091 ENSG00000002726 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase copper containing 1 protein-coding chr2-12211 chr2 42843858 42844068 + 5.18 0.000 Intergenic Intergenic -51380 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr15-4160 chr15 90627490 90627700 + 5.18 0.000 intron (NM_001042574, intron 10 of 14) intron (NM_001042574, intron 10 of 14) -32639 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr21-1757 chr21 35428705 35428915 + 5.18 0.000 intron (NR_073512, intron 2 of 2) intron (NR_073512, intron 2 of 2) 151954 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr7-9541 chr7 140328361 140328571 + 5.18 0.000 Intergenic Intergenic 70064 NM_001363375 84255 Hs.446021 NM_032295 ENSG00000157800 SLC37A3 - solute carrier family 37 member 3 protein-coding chr16-6218 chr16 28231750 28231960 + 5.18 0.000 Intergenic Intergenic -19890 NM_015171 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr2-13700 chr2 165819971 165820181 + 5.18 0.000 Intergenic Intergenic -25829 NM_004482 2591 Hs.170986 NM_004482 ENSG00000115339 GALNT3 GalNAc-T3|HFTC|HFTC1|HHS polypeptide N-acetylgalactosaminyltransferase 3 protein-coding chr2-12697 chr2 77126722 77126932 + 5.18 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) 140862 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr7-2774 chr7 73131084 73131294 + 5.18 0.000 intron (NR_146079, intron 2 of 9) AluJo|SINE|Alu -18403 NM_001351351 102723849 NM_001351351 SPDYE17 - speedy/RINGO cell cycle regulator family member E17 protein-coding chr1-11319 chr1 21971588 21971798 + 5.18 0.000 Intergenic AluSz|SINE|Alu -5329 NM_007352 23436 Hs.728752 NM_007352 ENSG00000219073 CELA3B CBPP|ELA3B chymotrypsin like elastase 3B protein-coding chr3-9005 chr3 18444499 18444709 + 5.18 0.000 promoter-TSS (NR_125803) promoter-TSS (NR_125803) 268 NM_001322876 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chrX-3392 chrX 3061678 3061888 + 5.18 0.000 intron (NM_001201539, intron 1 of 10) L1PA6|LINE|L1 -5016 NM_004042 416 Hs.101674 NM_004042 ENSG00000062096 ARSF ASF arylsulfatase F protein-coding chr8-5355 chr8 18720140 18720350 + 5.18 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 88622 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr17-5716 chr17 57046099 57046309 + 5.18 0.000 non-coding (NR_002818, exon 1 of 1) non-coding (NR_002818, exon 1 of 1) 726 NR_002818 376412 Hs.132299 NR_002818 ENSG00000261192 RNF126P1 - ring finger protein 126 pseudogene 1 pseudo chr10-5726 chr10 101204112 101204322 + 5.18 0.000 Intergenic Intergenic 24743 NM_006562 10660 Hs.37128 NM_006562 ENSG00000138136 LBX1 HPX-6|HPX6|LBX1H|homeobox ladybird homeobox 1 protein-coding chr7-8685 chr7 73779590 73779800 + 5.18 0.000 Intergenic Intergenic -9425 NM_001306 1365 Hs.647023 NM_001306 ENSG00000165215 CLDN3 C7orf1|CPE-R2|CPETR2|HRVP1|RVP1 claudin 3 protein-coding chr7-8191 chr7 31308175 31308385 + 5.18 0.000 Intergenic Intergenic 32446 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr4-8217 chr4 136549571 136549781 + 5.18 0.000 Intergenic Intergenic -635996 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr6-1946 chr6 117101391 117101601 + 5.18 0.000 Intergenic AluJb|SINE|Alu -164062 NM_153453 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr21-1356 chr21 36287432 36287642 + 5.18 0.000 intron (NM_005128, intron 32 of 36) intron (NM_005128, intron 32 of 36) -32652 NM_001320446 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr1-14565 chr1 53155129 53155339 + 5.18 0.000 Intergenic MER52D|LTR|ERV1 -12596 NM_001287596 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr1-13054 chr1 175155490 175155700 + 5.18 0.000 Intergenic MIR|SINE|MIR 37181 NM_001162895 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr13-3845 chr13 49632949 49633159 + 5.18 0.000 3' UTR (NM_138450, exon 2 of 2) 3' UTR (NM_138450, exon 2 of 2) 4547 NM_138450 115761 Hs.558599 NM_138450 ENSG00000152213 ARL11 ARLTS1 ADP ribosylation factor like GTPase 11 protein-coding chr8-4981 chr8 134457409 134457619 + 5.18 0.000 Intergenic Intergenic -140557 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr7-8042 chr7 20888696 20888906 + 5.18 0.000 intron (NR_126381, intron 2 of 5) MER1B|DNA|hAT-Charlie 53370 NR_126381 104355138 Hs.650722 NR_126381 ENSG00000232790 LINC01162 - long intergenic non-protein coding RNA 1162 ncRNA chr12-8302 chr12 128091802 128092012 + 5.18 0.000 intron (NR_104647, intron 3 of 4) intron (NR_104647, intron 3 of 4) 26234 NR_104647 100996679 Hs.539127 NR_104647 ENSG00000256551 LINC02369 - long intergenic non-protein coding RNA 2369 ncRNA chr15-5203 chr15 94492808 94493018 + 5.18 0.000 Intergenic HERVL-int|LTR|ERVL 136983 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr18-3512 chr18 74579920 74580130 + 5.18 0.000 intron (NM_032649, intron 9 of 11) intron (NM_032649, intron 9 of 11) 17810 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr5-6215 chr5 74594956 74595166 + 5.18 0.000 Intergenic Intergenic -44962 NM_001292004 3074 Hs.69293 NM_000521 ENSG00000049860 HEXB ENC-1AS|HEL-248|HEL-S-111 hexosaminidase subunit beta protein-coding chr19-4940 chr19 44671663 44671873 + 5.18 0.000 5' UTR (NM_020219, exon 1 of 8) 5' UTR (NM_020219, exon 1 of 8) 316 NM_001127893 56971 Hs.416925 NM_020219 ENSG00000186567 CEACAM19 CEACM19|CEAL1 carcinoembryonic antigen related cell adhesion molecule 19 protein-coding chr4-6976 chr4 21437822 21438032 + 5.18 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) 26831 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr1-9207 chr1 22257918 22258128 + 5.18 0.000 Intergenic Intergenic -8216 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr16-6432 chr16 56558565 56558775 + 5.18 0.000 Intergenic Intergenic -6403 NM_032935 84560 Hs.567624 NM_032935 ENSG00000102891 MT4 MT-4|MT-IV|MTIV metallothionein 4 protein-coding chr15-3520 chr15 99661934 99662144 + 5.18 0.000 intron (NM_001365201, intron 4 of 11) L1ME3B|LINE|L1 29061 NM_001130928 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr4-5728 chr4 45388711 45388921 + 5.18 0.000 Intergenic L1PA15|LINE|L1 -662182 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr11-9117 chr11 33086964 33087174 + 5.18 0.000 exon (NM_001326, exon 18 of 21) exon (NM_001326, exon 18 of 21) 10919 NR_015451 283267 Hs.533701 NR_015451 ENSG00000280798 LINC00294 NCRNA00294 long intergenic non-protein coding RNA 294 ncRNA chr10-8400 chr10 83983753 83983963 + 5.18 0.000 Intergenic Intergenic -155651 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr2-10632 chr2 12722092 12722302 + 5.18 0.000 intron (NM_021643, intron 1 of 2) intron (NM_021643, intron 1 of 2) 5261 NR_027303 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr20-3268 chr20 3692687 3692897 + 5.18 0.000 intron (NM_023068, intron 15 of 21) intron (NM_023068, intron 15 of 21) -10102 NM_153202 80332 Hs.173716 NM_025220 ENSG00000149451 ADAM33 C20orf153|DJ964F7.1 ADAM metallopeptidase domain 33 protein-coding chr4-7431 chr4 67017561 67017771 + 5.18 0.000 Intergenic Intergenic 404334 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr22-3655 chr22 22697927 22698137 + 5.18 0.000 Intergenic Intergenic 51720 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr4-8526 chr4 163280938 163281148 + 5.18 0.000 Intergenic Intergenic 51553 NM_000909 4886 Hs.519057 NM_000909 ENSG00000164128 NPY1R NPY1-R|NPYR neuropeptide Y receptor Y1 protein-coding chr5-7459 chr5 32419826 32420036 + 5.18 0.000 non-coding (NR_144318, exon 3 of 19) non-coding (NR_144318, exon 3 of 19) 24809 NR_144318 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr8-5272 chr8 139344458 139344668 + 5.18 0.000 Intergenic AluY|SINE|Alu 358560 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr9-4039 chr9 92101440 92101650 + 5.18 0.000 intron (NM_001368273, intron 4 of 15) AluY|SINE|Alu 13868 NM_178324 10558 Hs.90458 NM_006415 ENSG00000090054 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase long chain base subunit 1 protein-coding chr11-8885 chr11 15015051 15015261 + 5.18 0.000 Intergenic L1PA10|LINE|L1 -42805 NR_125898 796 Hs.37058 NM_001741 ENSG00000110680 CALCA CALC1|CGRP|CGRP-I|CGRP1|CT|KC|PCT calcitonin related polypeptide alpha protein-coding chr2-13739 chr2 168490795 168491005 + 5.18 0.000 intron (NM_001256126, intron 1 of 10) intron (NM_001256126, intron 1 of 10) 34628 NM_001256126 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr12-5435 chr12 122865879 122866089 + 5.18 0.000 3' UTR (NM_024667, exon 4 of 4) 3' UTR (NM_024667, exon 4 of 4) 30140 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr1-12934 chr1 146020015 146020225 + 5.18 0.000 intron (NM_202004, intron 1 of 2) intron (NM_202004, intron 1 of 2) 1615 NM_213652 148738 Hs.632436 NM_145277 ENSG00000168509 HJV HFE2|HFE2A|JH|RGMC hemojuvelin BMP co-receptor protein-coding chr19-6160 chr19 4423461 4423671 + 5.18 0.000 intron (NM_005483, intron 6 of 14) intron (NM_005483, intron 6 of 14) 20926 NM_005483 10036 Hs.79018 NM_005483 ENSG00000167670 CHAF1A CAF-1|CAF1|CAF1B|CAF1P150|P150 chromatin assembly factor 1 subunit A protein-coding chr4-7156 chr4 38805914 38806124 + 5.18 0.000 Intergenic Intergenic -1228 NM_003263 7096 Hs.621817 NM_003263 ENSG00000174125 TLR1 CD281|TIL|TIL. LPRS5|rsc786 toll like receptor 1 protein-coding chr8-7300 chr8 132167798 132168008 + 5.18 0.000 intron (NM_001204824, intron 8 of 14) intron (NM_001204824, intron 8 of 14) -62638 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr1-9386 chr1 30913596 30913806 + 5.18 0.000 Intergenic Intergenic -4943 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr1-15640 chr1 163283289 163283499 + 5.18 0.000 intron (NM_001254748, intron 2 of 5) L1MA5|LINE|L1 38397 NM_001254748 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr18-2148 chr18 57067746 57067956 + 5.18 0.000 intron (NR_048536, intron 2 of 3) HERVH-int|LTR|ERV1 4268 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr13-3039 chr13 27960812 27961022 + 5.18 0.000 TTS (NM_001354700) TTS (NM_001354700) 7391 NR_135254 100132234 Hs.197435 NR_135254 ENSG00000260704 LINC00543 - long intergenic non-protein coding RNA 543 ncRNA chr20-3617 chr20 6458671 6458881 + 5.18 0.000 intron (NR_109953, intron 2 of 3) L1PB1|LINE|L1 32044 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chrX-4818 chrX 101860022 101860232 + 5.18 0.000 Intergenic Intergenic -2550 NR_159738 55998 Hs.307077 NM_032946 ENSG00000126952 NXF5 - nuclear RNA export factor 5 protein-coding chr5-8026 chr5 89119476 89119686 + 5.18 0.000 intron (NR_136221, intron 4 of 6) intron (NR_136221, intron 4 of 6) -215476 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr9-8833 chr9 135401068 135401278 + 5.18 0.000 Intergenic AluSx1|SINE|Alu 57924 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr1-15490 chr1 155421928 155422138 + 5.18 0.000 intron (NM_018489, intron 5 of 27) L1MB3|LINE|L1 -11147 NR_034180 645682 Hs.632482 NR_034180 ENSG00000237872 POU5F1P4 OCT3|OCT4|OTF-3|OTF3|Oct-3|Oct-4|Oct4-pg4|POU5F1|POU5FLC1 POU class 5 homeobox 1 pseudogene 4 pseudo chr3-7875 chr3 127281782 127281992 + 5.18 0.000 Intergenic Intergenic 6159 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr10-8612 chr10 97362306 97362516 + 5.18 0.000 intron (NM_001145114, intron 28 of 31) intron (NM_001145114, intron 28 of 31) -27682 NM_012083 23401 Hs.140720 NM_012083 ENSG00000181274 FRAT2 FRAT-2 FRAT regulator of WNT signaling pathway 2 protein-coding chr12-7776 chr12 96107209 96107419 + 5.18 0.000 Intergenic Intergenic -63794 NM_001256643 4048 Hs.524648 NM_000895 ENSG00000111144 LTA4H - leukotriene A4 hydrolase protein-coding chr21-1181 chr21 42764086 42764296 + 5.18 0.000 intron (NM_001001574, intron 12 of 17) intron (NM_001001574, intron 12 of 17) 15803 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr12-4477 chr12 17194745 17194955 + 5.18 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR 206103 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo chr20-3776 chr20 20863923 20864133 + 5.18 0.000 Intergenic Intergenic -151384 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr2-8576 chr2 136703627 136703837 + 5.18 0.000 Intergenic Intergenic -61813 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr11-6567 chr11 71589182 71589392 + 5.18 0.000 Intergenic HERVE-int|LTR|ERV1 -6412 NM_001005405 440051 Hs.679617 NM_001005405 ENSG00000204571 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding chr2-7478 chr2 16484482 16484692 + 5.18 0.000 Intergenic LTR41|LTR|ERVL 181247 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr6-2742 chr6 97656911 97657121 + 5.18 0.000 intron (NR_110757, intron 3 of 4) intron (NR_110757, intron 3 of 4) 351430 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr7-5150 chr7 6047465 6047675 + 5.18 0.000 intron (NM_001134335, intron 4 of 14) AluSx1|SINE|Alu 11605 NM_014413 27102 Hs.520205 NM_014413 ENSG00000086232 EIF2AK1 HCR|HRI eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding chr5-7646 chr5 52500752 52500962 + 5.18 0.000 Intergenic Intergenic -287059 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr16-2774 chr16 13746735 13746945 + 5.18 0.000 Intergenic AluYc|SINE|Alu -173317 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr5-7662 chr5 53714775 53714985 + 5.18 0.000 Intergenic L1PA16|LINE|L1 104802 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr5-7156 chr5 3213493 3213703 + 5.18 0.000 Intergenic AluSx1|SINE|Alu 35763 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr14-2469 chr14 88806832 88807042 + 5.18 0.000 Intergenic L2c|LINE|L2 -13984 NM_183387 161436 Hs.325846 NM_183387 ENSG00000165521 EML5 EMAP-2|EMAP-5 EMAP like 5 protein-coding chr16-3817 chr16 54544466 54544676 + 5.18 0.000 Intergenic Intergenic -173872 NR_134923 100996345 Hs.112680 NR_134922 ENSG00000261803 LINC02140 - long intergenic non-protein coding RNA 2140 ncRNA chr2-12873 chr2 97735447 97735657 + 5.18 0.000 intron (NM_207519, intron 2 of 5) CpG-16331 1146 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr9-7435 chr9 24674757 24674967 + 5.18 0.000 Intergenic Intergenic -128965 NM_001365008 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr5-7205 chr5 7601718 7601928 + 5.18 0.000 intron (NM_020546, intron 3 of 24) MLT1C|LTR|ERVL-MaLR 205685 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chr20-3736 chr20 18239031 18239241 + 5.18 0.000 Intergenic L1PBa|LINE|L1 -49092 NM_001282995 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr8-2271 chr8 96030973 96031183 + 5.18 0.000 Intergenic L2a|LINE|L2 -82730 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr10-2938 chr10 19683904 19684114 + 5.18 0.000 intron (NM_001142308, intron 36 of 39) L1PA8|LINE|L1 44541 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr9-7396 chr9 19629416 19629626 + 5.18 0.000 intron (NM_020344, intron 1 of 9) intron (NM_020344, intron 1 of 9) 157498 NM_001193288 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr10-5783 chr10 104498635 104498845 + 5.18 0.000 Intergenic Intergenic -18465 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr9-4437 chr9 17127427 17127637 + 5.18 0.000 Intergenic L2a|LINE|L2 -7508 NM_001286984 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr22-1595 chr22 18110256 18110466 + 5.18 0.000 promoter-TSS (NM_018943) promoter-TSS (NM_018943) -448 NM_018943 51807 Hs.137400 NM_018943 ENSG00000183785 TUBA8 CDCBM8|TUBAL2 tubulin alpha 8 protein-coding chr2-12461 chr2 60252707 60252917 + 5.18 0.000 Intergenic Intergenic 130224 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr14-5276 chr14 100495602 100495812 + 5.18 0.000 intron (NM_001350950, intron 3 of 5) L1MCa|LINE|L1 72363 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr4-4568 chr4 74793875 74794085 + 5.18 0.000 intron (NM_001316963, intron 1 of 4) CpG 543 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr3-8006 chr3 185523667 185523877 + 5.18 0.000 intron (NM_139248, intron 5 of 9) AluSq|SINE|Alu -24737 NM_080652 90407 Hs.677570 NM_080652 ENSG00000163900 TMEM41A 2900010K02Rik transmembrane protein 41A protein-coding chr11-7081 chr11 121741949 121742159 + 5.18 0.000 Intergenic Intergenic 289740 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr5-8502 chr5 133605299 133605509 + 5.18 0.000 intron (NM_015082, intron 1 of 15) intron (NM_015082, intron 1 of 15) 7137 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr16-4564 chr16 66859299 66859509 + 5.18 0.000 Intergenic Intergenic 14475 NM_001365337 766 Hs.37014 NM_005182 ENSG00000168748 CA7 CA-VII|CAVII carbonic anhydrase 7 protein-coding chr4-8594 chr4 169857648 169857858 + 5.18 0.000 Intergenic AluJo|SINE|Alu -99809 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr10-4951 chr10 27774993 27775203 + 5.18 0.000 Intergenic Intergenic -29279 NM_001242702 283078 Hs.128193 NM_173576 ENSG00000150051 MKX C10orf48|IFRX|IRXL1 mohawk homeobox protein-coding chr4-7051 chr4 29044318 29044528 + 5.18 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 47639 NR_146499 102723764 NR_146499 LINC02364 - long intergenic non-protein coding RNA 2364 ncRNA chr11-9161 chr11 34827160 34827370 + 5.18 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -88865 NM_001166158 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding chr7-9655 chr7 151386719 151386929 + 5.18 0.000 intron (NM_001284260, intron 3 of 5) intron (NM_001284260, intron 3 of 5) -22337 NR_034013 100131176 Hs.659231 NR_034012 ENSG00000243836 WDR86-AS1 - WDR86 antisense RNA 1 ncRNA chr3-11003 chr3 179895657 179895867 + 5.18 0.000 intron (NM_001256753, intron 1 of 12) intron (NM_001256753, intron 1 of 12) -2432 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chrX-4608 chrX 74343936 74344146 + 5.18 0.000 Intergenic LTR55|LTR|ERVL? 39861 NM_203303 389874 Hs.157231 NM_203303 ENSG00000187969 ZCCHC13 CNBP2|ZNF9L zinc finger CCHC-type containing 13 protein-coding chr20-2578 chr20 37639226 37639436 + 5.18 0.000 Intergenic AluJb|SINE|Alu -16212 NR_047461 100861522 Hs.580680 NR_047461 ENSG00000225759 LINC00489 - long intergenic non-protein coding RNA 489 ncRNA chr12-5157 chr12 101829999 101830209 + 5.18 0.000 intron (NM_024312, intron 1 of 20) intron (NM_024312, intron 1 of 20) 855 NM_024312 79158 Hs.46850 NM_024312 ENSG00000111670 GNPTAB GNPTA|ICD N-acetylglucosamine-1-phosphate transferase subunits alpha and beta protein-coding chr9-6477 chr9 93037461 93037671 + 5.18 0.000 Intergenic Intergenic -21122 NM_001287006 203328 Hs.88417 NM_145006 ENSG00000157303 SUSD3 - sushi domain containing 3 protein-coding chr4-3740 chr4 79495207 79495417 + 5.18 0.000 intron (NR_038826, intron 2 of 3) intron (NR_038826, intron 2 of 3) 2719 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr7-4738 chr7 63077452 63077662 + 5.18 0.000 Intergenic AluYm1|SINE|Alu 226499 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr4-8564 chr4 166217858 166218068 + 5.18 0.000 Intergenic AluSx1|SINE|Alu 344726 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr3-8725 chr3 194022195 194022405 + 5.18 0.000 intron (NR_136179, intron 1 of 2) intron (NR_136179, intron 1 of 2) -18641 NR_033944 647323 Hs.652830 NR_033944 ENSG00000214146 LINC02026 - long intergenic non-protein coding RNA 2026 ncRNA chr9-7401 chr9 20227365 20227575 + 5.18 0.000 Intergenic Intergenic 183768 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr17-8596 chr17 80622303 80622513 + 5.18 0.000 intron (NM_020761, intron 1 of 33) L4_B_Mam|LINE|RTE-X 77570 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr11-2882 chr11 43590308 43590518 + 5.18 0.000 Intergenic Intergenic 9019 NR_029697 406918 NR_029697 ENSG00000199077 MIR129-2 MIR-129b|MIRN129-2|mir-129-2 microRNA 129-2 ncRNA chr3-10514 chr3 137596857 137597067 + 5.18 0.000 Intergenic HERVH-int|LTR|ERV1 -167353 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding chr9-4842 chr9 103657 103867 + 5.18 0.000 Intergenic AluSc8|SINE|Alu 14655 NM_207305 2298 Hs.584759 NM_207305 ENSG00000170122 FOXD4 FKHL9|FOXD4A|FREAC-5|FREAC5 forkhead box D4 protein-coding chr7-8252 chr7 35747679 35747889 + 5.18 0.000 Intergenic Intergenic 31347 NR_108082 100506725 Hs.304253 NR_108082 ENSG00000227544 LOC100506725 - uncharacterized LOC100506725 ncRNA chr19-6283 chr19 7974985 7975195 + 5.18 0.000 intron (NM_001419, intron 3 of 5) intron (NM_001419, intron 3 of 5) 30551 NM_001419 1994 Hs.184492 NM_001419 ENSG00000066044 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding chr12-7151 chr12 48216360 48216570 + 5.18 0.000 Intergenic MER83|LTR|ERV1 -13173 NM_001004134 121275 Hs.446790 NM_001004134 ENSG00000172640 OR10AD1 OR10AD1P|OR12-1 olfactory receptor family 10 subfamily AD member 1 protein-coding chr8-6311 chr8 46143814 46144024 + 5.18 0.000 Intergenic GSAT|Satellite|centr 473724 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr9-7953 chr9 91300749 91300959 + 5.18 0.000 intron (NM_001306190, intron 3 of 8) L2c|LINE|L2 61070 NM_001698 549 Hs.175905 NM_001698 ENSG00000148090 AUH - AU RNA binding methylglutaconyl-CoA hydratase protein-coding chr6-8501 chr6 157892655 157892865 + 5.18 0.000 intron (NM_016224, intron 4 of 17) intron (NM_016224, intron 4 of 17) 69514 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr7-9065 chr7 104148135 104148345 + 5.18 0.000 intron (NM_002553, intron 12 of 13) MIRb|SINE|MIR 59773 NM_002553 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chr3-9884 chr3 82219477 82219687 + 5.18 0.000 intron (NR_147146, intron 3 of 8) L1PA16|LINE|L1 233440 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr11-7360 chr11 68524804 68525014 + 5.18 0.000 intron (NM_001352348, intron 3 of 24) intron (NM_001352348, intron 3 of 24) 64157 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr6-7983 chr6 114550372 114550582 + 5.18 0.000 Intergenic Intergenic -487600 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr7-6815 chr7 33684985 33685195 + 5.18 0.000 Intergenic Intergenic -219825 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr20-4328 chr20 53211123 53211333 + 5.18 0.000 intron (NM_001193421, intron 1 of 2) MIR|SINE|MIR 25945 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr6-6621 chr6 150277988 150278198 + 5.18 0.000 Intergenic Intergenic -90919 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr22-3337 chr22 22871229 22871439 + 5.18 0.000 Intergenic Intergenic -14933 NR_049835 100847006 NR_049835 ENSG00000264824 MIR5571 - microRNA 5571 ncRNA chr2-14418 chr2 221780872 221781082 + 5.18 0.000 Intergenic Intergenic -206775 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr3-8890 chr3 11409716 11409926 + 5.18 0.000 intron (NM_001144912, intron 16 of 16) L1MCa|LINE|L1 137424 NM_001349232 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr17-6459 chr17 16235226 16235436 + 5.18 0.000 intron (NM_004278, intron 2 of 6) L1MC5a|LINE|L1 18121 NM_004278 9487 Hs.499793 NM_004278 ENSG00000108474 PIGL CHIME phosphatidylinositol glycan anchor biosynthesis class L protein-coding chr1-10063 chr1 92802037 92802247 + 5.18 0.000 Intergenic MER5A|DNA|hAT-Charlie -9732 NM_005665 7813 Hs.594434 NM_005665 ENSG00000067208 EVI5 EVI-5|NB4S ecotropic viral integration site 5 protein-coding chr8-6752 chr8 90676178 90676388 + 5.18 0.000 Intergenic Intergenic -30200 NM_001008495 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr1-14985 chr1 90281666 90281876 + 5.18 0.000 Intergenic Intergenic 286661 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr15-4210 chr15 25960103 25960313 + 5.18 0.000 intron (NR_040082, intron 1 of 4) L2c|LINE|L2 57848 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr16-5245 chr16 35573290 35573500 + 5.18 0.000 Intergenic AluJb|SINE|Alu -66225 NR_034018 100130700 Hs.97712 NR_034018 TP53TG3HP - TP53 target 3 family member H, pseudogene pseudo chr1-14787 chr1 70529077 70529287 + 5.18 0.000 Intergenic LTR33C|LTR|ERVL 117914 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr16-5667 chr16 69294808 69295018 + 5.18 0.000 intron (NM_006750, intron 5 of 6) AluSx|SINE|Alu -16437 NM_013245 27183 Hs.128420 NM_013245 ENSG00000132612 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A protein-coding chr1-8157 chr1 15857186 15857396 + 5.18 0.000 intron (NM_015001, intron 1 of 14) AluJb|SINE|Alu -9144 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr5-7884 chr5 74947432 74947642 + 5.18 0.000 Intergenic Intergenic -80571 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr5-8947 chr5 159306931 159307141 + 5.18 0.000 Intergenic AluJr|SINE|Alu 23437 NM_002187 3593 Hs.674 NM_002187 ENSG00000113302 IL12B CLMF|CLMF2|IL-12B|IMD28|IMD29|NKSF|NKSF2 interleukin 12B protein-coding chr11-10531 chr11 120056281 120056491 + 5.18 0.000 Intergenic Intergenic 72467 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr11-8540 chr11 130628614 130628824 + 5.18 0.000 Intergenic Intergenic -38016 NR_107019 102466873 NR_107019 ENSG00000274999 MIR8052 hsa-mir-8052 microRNA 8052 ncRNA chr7-7747 chr7 1130590 1130800 + 5.18 0.000 intron (NM_001134396, intron 1 of 4) intron (NM_001134396, intron 1 of 4) 7552 NM_001318252 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr5-8740 chr5 146251662 146251872 + 5.18 0.000 exon (NM_018989, exon 9 of 21) exon (NM_018989, exon 9 of 21) 48162 NM_018989 54439 Hs.61441 NM_018989 ENSG00000091009 RBM27 ARRS1|Psc1|ZC3H18|ZC3H20 RNA binding motif protein 27 protein-coding chr14-4692 chr14 57439818 57440028 + 5.18 0.000 Intergenic L1MA3|LINE|L1 49337 NM_001011713 122830 Hs.165465 NM_001011713 ENSG00000139977 NAA30 C14orf35|MAK3|Mak3p|NAT12|NAT12P N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding GL000219.1-6 GL000219.1 54933 55143 + 5.18 0.000 NA NA NA NA chr5-8808 chr5 149725646 149725856 + 5.18 0.000 Intergenic Intergenic -4559 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr12-6926 chr12 25098349 25098559 + 5.18 0.000 intron (NR_159367, intron 14 of 19) L2|LINE|L2 45748 NM_001204126 4033 Hs.124922 NM_006152 ENSG00000118308 LRMP JAW1 lymphoid restricted membrane protein protein-coding chr18-2333 chr18 12667667 12667877 + 5.18 0.000 intron (NR_073537, intron 12 of 12) AluSg|SINE|Alu 9033 NM_147163 56984 Hs.464652 NM_020232 ENSG00000128789 PSMG2 CLAST3|HCCA3|HsT1707|MDS003|PAC2|TNFSF5IP1 proteasome assembly chaperone 2 protein-coding chr14-4497 chr14 37364925 37365135 + 5.18 0.000 intron (NM_138731, intron 10 of 13) L1MA2|LINE|L1 167093 NM_138731 145282 Hs.660396 NM_138731 ENSG00000151338 MIPOL1 CCDC193 mirror-image polydactyly 1 protein-coding chr8-6686 chr8 81755561 81755771 + 5.18 0.000 intron (NM_152284, intron 3 of 4) intron (NM_152284, intron 3 of 4) 23218 NM_152284 92421 Hs.183861 NM_152284 ENSG00000164695 CHMP4C SNF7-3|Shax3|VPS32C charged multivesicular body protein 4C protein-coding chr10-8427 chr10 85447116 85447326 + 5.18 0.000 non-coding (NR_120670, exon 3 of 3) non-coding (NR_120670, exon 3 of 3) -2371 NR_120671 101929684 Hs.554059 NR_120671 ENSG00000230962 LINC01520 - long intergenic non-protein coding RNA 1520 ncRNA chr4-8635 chr4 174520325 174520535 + 5.18 0.000 intron (NM_000860, intron 2 of 6) intron (NM_000860, intron 2 of 6) 2058 NM_000860 3248 Hs.596913 NM_000860 ENSG00000164120 HPGD 15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1 15-hydroxyprostaglandin dehydrogenase protein-coding chr6-2980 chr6 40482950 40483160 + 5.18 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 104309 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr8-3986 chr8 53113864 53114074 + 5.18 0.000 Intergenic MER21C|LTR|ERVL 137668 NM_000912 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr5-6601 chr5 34048081 34048291 + 5.18 0.000 intron (NR_146599, intron 7 of 11) MamRep605|LTR?|LTR? -4973 NM_181435 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr11-9193 chr11 36690714 36690924 + 5.18 0.000 Intergenic Intergenic -92540 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr19-7015 chr19 49717470 49717680 + 5.18 0.000 Intergenic LTR50|LTR|ERVL 26459 NR_108072 126129 Hs.112195 NM_152359 ENSG00000169169 CPT1C CATL1|CPT1-B|CPT1P|CPTI-B|CPTIC|SPG73 carnitine palmitoyltransferase 1C protein-coding chr6-5850 chr6 35401792 35402002 + 5.18 0.000 intron (NM_001171818, intron 3 of 8) intron (NM_001171818, intron 3 of 8) -50464 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr2-14619 chr2 234393331 234393541 + 5.18 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 61159 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr3-5264 chr3 112786871 112787081 + 5.18 0.000 Intergenic Intergenic -15502 NR_149027 100129297 Hs.570655 NR_149026 CD200R1L-AS1 - CD200R1L antisense RNA 1 ncRNA chr9-6986 chr9 111240045 111240255 + 5.18 0.000 Intergenic Intergenic 31064 NR_106989 102465800 NR_106989 ENSG00000274263 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA chrX-5245 chrX 137334351 137334561 + 5.18 0.000 Intergenic Intergenic -231671 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr7-4415 chr7 101442270 101442480 + 5.18 0.000 intron (NM_133457, intron 2 of 12) AluSx3|SINE|Alu 79500 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr9-4934 chr9 13697312 13697522 + 5.18 0.000 Intergenic L1PA13|LINE|L1 -230554 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr10-8819 chr10 108981701 108981911 + 5.18 0.000 Intergenic Intergenic -912513 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr2-13726 chr2 167894598 167894808 + 5.18 0.000 intron (NR_131227, intron 2 of 4) AluSq2|SINE|Alu 46441 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr16-6567 chr16 65901699 65901909 + 5.18 0.000 Intergenic Intergenic -325504 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr10-7357 chr10 1009025 1009235 + 5.18 0.000 intron (NM_012341, intron 11 of 16) intron (NM_012341, intron 11 of 16) -13507 NR_027709 55853 Hs.728538 NM_018470 ENSG00000232656 IDI2-AS1 C10orf110|HT009|IDI2-AS IDI2 antisense RNA 1 ncRNA chr4-6102 chr4 14546091 14546301 + 5.18 0.000 intron (NR_126435, intron 5 of 6) L1ME2|LINE|L1 341973 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr22-4113 chr22 43768041 43768251 + 5.18 0.000 intron (NM_198856, intron 2 of 29) intron (NM_198856, intron 2 of 29) 44159 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr2-12755 chr2 85051246 85051456 + 5.18 0.000 intron (NM_020122, intron 6 of 6) intron (NM_020122, intron 6 of 6) 15996 NR_146453 100996478 Hs.434398 NR_146453 ENSG00000260840 LINC01964 - long intergenic non-protein coding RNA 1964 ncRNA chr1-12255 chr1 222429387 222429597 + 5.18 0.000 Intergenic L1PB3|LINE|L1 118612 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr2-10367 chr2 171478124 171478334 + 5.18 0.000 intron (NM_001164821, intron 10 of 11) intron (NM_001164821, intron 10 of 11) -43426 NM_024770 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr11-10149 chr11 91760901 91761111 + 5.18 0.000 Intergenic MIR|SINE|MIR -464028 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr7-7157 chr7 5122081 5122291 + 5.18 0.000 non-coding (NR_034163, exon 6 of 6) non-coding (NR_034163, exon 6 of 6) 22360 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr16-6753 chr16 75207565 75207775 + 5.18 0.000 promoter-TSS (NM_001025200).2 promoter-TSS (NM_001025200).2 -509 NM_001025200 440387 Hs.610926 NM_001025200 ENSG00000168928 CTRB2 - chymotrypsinogen B2 protein-coding chr1-16362 chr1 220475710 220475920 + 5.18 0.000 Intergenic LTR12C|LTR|ERV1 -52321 NM_018650 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr18-3279 chr18 52298452 52298662 + 5.18 0.000 Intergenic L1MA4A|LINE|L1 -41640 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr19-4912 chr19 42338964 42339174 + 5.18 0.000 intron (NM_001271938, intron 8 of 41) AluSx1|SINE|Alu -12062 NR_107044 102465875 NR_107044 ENSG00000277533 MIR8077 hsa-mir-8077 microRNA 8077 ncRNA chr8-5813 chr8 3633247 3633457 + 5.18 0.000 intron (NM_033225, intron 7 of 69) intron (NM_033225, intron 7 of 69) -904901 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr3-7406 chr3 100972997 100973207 + 5.18 0.000 intron (NM_001349332, intron 1 of 35) Tigger17a|DNA|TcMar-Tigger 20388 NM_001365643 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr17-8356 chr17 74072191 74072401 + 5.18 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -131382 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr19-3295 chr19 4151832 4152042 + 5.18 0.000 Intergenic AluSx|SINE|Alu -1694 NM_001271997 84699 Hs.247744 NM_032607 ENSG00000060566 CREB3L3 CREB-H|CREBH|HYST1481 cAMP responsive element binding protein 3 like 3 protein-coding chr5-8133 chr5 99314643 99314853 + 5.18 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -219242 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr20-3047 chr20 1979378 1979588 + 5.18 0.000 3' UTR (NM_024411, exon 4 of 4) 3' UTR (NM_024411, exon 4 of 4) 13323 NM_001190892 5173 Hs.22584 NM_024411 ENSG00000101327 PDYN ADCA|PENKB|SCA23 prodynorphin protein-coding chr2-7524 chr2 21071848 21072058 + 5.18 0.000 Intergenic Intergenic -27880 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr3-9172 chr3 34036234 34036444 + 5.18 0.000 Intergenic Intergenic 237709 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr5-6187 chr5 60738538 60738748 + 5.18 0.000 Intergenic L1M1|LINE|L1 -38477 NM_001145208 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr19-6144 chr19 4191065 4191275 + 5.18 0.000 intron (NM_133475, intron 2 of 21) intron (NM_133475, intron 2 of 21) 7816 NM_133475 170961 Hs.197872 NM_133475 ENSG00000089847 ANKRD24 - ankyrin repeat domain 24 protein-coding chr3-7466 chr3 135035077 135035287 + 5.18 0.000 intron (NM_004441, intron 3 of 15) intron (NM_004441, intron 3 of 15) 239922 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr20-3717 chr20 16735791 16736001 + 5.18 0.000 intron (NM_198220, intron 3 of 6) Chap1_Mam|DNA|hAT-Charlie 5870 NM_198220 6629 Hs.280378 NM_003092 ENSG00000125870 SNRPB2 Msl1|U2B'' small nuclear ribonucleoprotein polypeptide B2 protein-coding chr12-7667 chr12 84229882 84230092 + 5.18 0.000 Intergenic L1M1|LINE|L1 682812 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr3-9711 chr3 65913972 65914182 + 5.18 0.000 intron (NR_145422, intron 1 of 2) intron (NR_145422, intron 1 of 2) 20261 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr9-6158 chr9 71734632 71734842 + 5.18 0.000 intron (NM_001135820, intron 5 of 22) intron (NM_001135820, intron 5 of 22) 33776 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr10-6632 chr10 98811211 98811421 + 5.18 0.000 intron (NM_021828, intron 3 of 11) L2c|LINE|L2 113252 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr7-7463 chr7 91249822 91250032 + 5.18 0.000 Intergenic AluJr|SINE|Alu -14506 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr2-9722 chr2 62974903 62975113 + 5.18 0.000 intron (NM_001354215, intron 15 of 24) MLT1G3|LTR|ERVL-MaLR 72703 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr11-10400 chr11 114017885 114018095 + 5.18 0.000 Intergenic LTR86C|LTR|ERVL 40490 NM_001161772 3359 Hs.413899 NM_000869 ENSG00000166736 HTR3A 5-HT-3|5-HT3A|5-HT3R|5HT3R|HTR3 5-hydroxytryptamine receptor 3A protein-coding chr21-1885 chr21 43847705 43847915 + 5.18 0.000 Intergenic Intergenic -17413 NM_001369881 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr10-7268 chr10 127804514 127804724 + 5.18 0.000 Intergenic Intergenic 67434 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr21-996 chr21 14056153 14056363 + 5.18 0.000 Intergenic G-rich|Low_complexity|Low_complexity -75814 NR_027270 391267 Hs.364456 NM_153750 ENSG00000215559 ANKRD20A11P C21orf81 ankyrin repeat domain 20 family member A11, pseudogene pseudo chr1-14620 chr1 55546492 55546702 + 5.18 0.000 Intergenic Intergenic 320956 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr19-5758 chr19 19539504 19539714 + 5.18 0.000 intron (NM_153221, intron 1 of 7) intron (NM_153221, intron 1 of 7) 1344 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chrX-3825 chrX 148914450 148914660 + 5.18 0.000 intron (NM_001170628, intron 6 of 17) intron (NM_001170628, intron 6 of 17) 195464 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr7-8113 chr7 26487567 26487777 + 5.18 0.000 intron (NR_148500, intron 2 of 5) intron (NR_148500, intron 2 of 5) 51153 NR_022006 9808 Hs.69749 NM_014769 ENSG00000122548 KIAA0087 - KIAA0087 lncRNA ncRNA chr6-2808 chr6 151700703 151700913 + 5.18 0.000 intron (NM_001122742, intron 1 of 9) intron (NM_001122742, intron 1 of 9) 10312 NM_001122742 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr1-13306 chr1 234691662 234691872 + 5.18 0.000 Intergenic L1ME5|LINE|L1 -32275 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA chr9-5560 chr9 111020489 111020699 + 5.18 0.000 intron (NM_001351399, intron 1 of 5) intron (NM_001351399, intron 1 of 5) 16186 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr18-2484 chr18 49572918 49573128 + 5.18 0.000 intron (NM_001308006, intron 4 of 8) intron (NM_001308006, intron 4 of 8) 10966 NM_001308006 9388 Hs.465102 NM_006033 ENSG00000101670 LIPG EDL|EL|PRO719 lipase G, endothelial type protein-coding chr1-14661 chr1 59163942 59164152 + 5.18 0.000 Intergenic Intergenic -17240 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr21-1943 chr21 45726327 45726537 + 5.18 0.000 intron (NM_001348238, intron 2 of 16) intron (NM_001348238, intron 2 of 16) -21582 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr9-6463 chr9 88775362 88775572 + 5.18 0.000 Intergenic Intergenic -29562 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr20-4443 chr20 61797904 61798114 + 5.18 0.000 intron (NM_001252339, intron 3 of 14) intron (NM_001252339, intron 3 of 14) -78261 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr1-9456 chr1 35229110 35229320 + 5.18 0.000 Intergenic Intergenic -36070 NM_005066 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr20-3745 chr20 18946945 18947155 + 5.18 0.000 Intergenic Intergenic -116847 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr19-6167 chr19 4563718 4563928 + 5.18 0.000 Intergenic L1MB3|LINE|L1 -4139 NM_032108 10501 Hs.465642 NM_020241 ENSG00000167680 SEMA6B SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ semaphorin 6B protein-coding chr12-4208 chr12 103092673 103092883 + 5.18 0.000 Intergenic Intergenic -59064 NR_126333 101929058 Hs.171310 NR_126333 ENSG00000257860 LOC101929058 - uncharacterized LOC101929058 ncRNA chr4-8390 chr4 150964145 150964355 + 5.18 0.000 intron (NM_001367550, intron 2 of 56) SVA_B|Retroposon|SVA 51017 NM_001199282 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr6-7660 chr6 83919647 83919857 + 5.18 0.000 intron (NM_016230, intron 7 of 15) intron (NM_016230, intron 7 of 15) 60063 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding chr12-7935 chr12 108888839 108889049 + 5.18 0.000 intron (NM_001917, intron 3 of 10) MIR|SINE|MIR 8852 NM_001917 1610 Hs.113227 NM_001917 ENSG00000110887 DAO DAAO|DAMOX|OXDA D-amino acid oxidase protein-coding chr2-11285 chr2 184093409 184093619 + 5.18 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -285461 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr16-5898 chr16 2328526 2328736 + 5.18 0.000 5' UTR (NM_001089, exon 3 of 33) 5' UTR (NM_001089, exon 3 of 33) 12097 NM_001089 21 Hs.26630 NM_001089 ENSG00000167972 ABCA3 ABC-C|ABC3|EST111653|LBM180|SMDP3 ATP binding cassette subfamily A member 3 protein-coding chr2-12822 chr2 94712859 94713069 + 5.18 0.000 Intergenic Intergenic 48220 NR_038409 90499 Hs.458439 NR_038409 FAM95A - family with sequence similarity 95 member A ncRNA chr5-6355 chr5 137910495 137910705 + 5.18 0.000 intron (NM_001300921, intron 8 of 14) AluSx|SINE|Alu 21143 NM_001258449 27039 Hs.716884 NM_014386 ENSG00000078795 PKD2L2 TRPP5 polycystin 2 like 2, transient receptor potential cation channel protein-coding chr12-7048 chr12 40128418 40128628 + 5.18 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -22442 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr1-15967 chr1 192359661 192359871 + 5.18 0.000 intron (NM_001039152, intron 4 of 4) intron (NM_001039152, intron 4 of 4) 42774 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr14-4945 chr14 74363836 74364046 + 5.18 0.000 Intergenic Intergenic 15470 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr2-10992 chr2 99834471 99834681 + 5.18 0.000 intron (NM_001025108, intron 7 of 23) L2|LINE|L2 271007 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr11-6870 chr11 101738422 101738632 + 5.18 0.000 Intergenic Intergenic -154520 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr4-4857 chr4 112370371 112370581 + 5.18 0.000 intron (NM_001102406, intron 2 of 15) intron (NM_001102406, intron 2 of 15) 73107 NM_001102406 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr18-2337 chr18 14010737 14010947 + 5.18 0.000 Intergenic SVA_D|Retroposon|SVA -95135 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding chr2-14267 chr2 215002317 215002527 + 5.18 0.000 intron (NR_103740, intron 21 of 54) intron (NR_103740, intron 21 of 54) 29664 NM_015657 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr20-3593 chr20 4639333 4639543 + 5.18 0.000 Intergenic AluJo|SINE|Alu -47018 NM_001271561 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr8-3943 chr8 46599560 46599770 + 5.18 0.000 intron (NR_146077, intron 3 of 8) L1MB8|LINE|L1 17978 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr1-7882 chr1 114400965 114401175 + 5.18 0.000 intron (NM_015906, intron 17 of 19) AluYc|SINE|Alu 110133 NM_033020 51592 Hs.26837 NM_015906 ENSG00000197323 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding chr12-8206 chr12 123281808 123282018 + 5.18 0.000 Intergenic Intergenic -9673 NR_073007 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr10-2678 chr10 99569878 99570088 + 5.18 0.000 Intergenic Intergenic 37041 NM_145285 159296 Hs.243272 NM_145285 ENSG00000119919 NKX2-3 CSX3|NK2.3|NKX2.3|NKX2C|NKX4-3 NK2 homeobox 3 protein-coding chrX-2663 chrX 115227092 115227302 + 5.18 0.000 intron (NM_001243963, intron 1 of 19) FAM|SINE|Alu 6875 NM_001243963 57631 Hs.65366 NM_020871 ENSG00000130224 LRCH2 dA204F4.4 leucine rich repeats and calponin homology domain containing 2 protein-coding chr2-5363 chr2 96500531 96500741 + 5.18 0.000 non-coding (NR_104346, exon 2 of 4) non-coding (NR_104346, exon 2 of 4) 4721 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr4-7822 chr4 99862301 99862511 + 5.18 0.000 intron (NM_001306151, intron 5 of 9) intron (NM_001306151, intron 5 of 9) 32021 NM_021970 8649 Hs.433332 NM_021970 ENSG00000109270 LAMTOR3 MAP2K1IP1|MAPBP|MAPKSP1|MP1|PRO0633|Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding chr19-5081 chr19 52336869 52337079 + 5.18 0.000 intron (NM_001161425, intron 1 of 5) intron (NM_001161425, intron 1 of 5) 729 NM_001161426 162963 Hs.147025 NM_173530 ENSG00000167554 ZNF610 - zinc finger protein 610 protein-coding chr12-5709 chr12 113140414 113140624 + 5.18 0.000 Intergenic L1ME4a|LINE|L1 -4280 NM_004658 8437 Hs.528693 NM_004658 ENSG00000111344 RASAL1 RASAL RAS protein activator like 1 protein-coding chr12-5585 chr12 28745759 28745969 + 5.18 0.000 Intergenic L2|LINE|L2 -403414 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr1-16119 chr1 204715542 204715752 + 5.18 0.000 Intergenic Intergenic -29909 NM_006338 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr3-8669 chr3 180487673 180487883 + 5.18 0.000 Intergenic L1PA5|LINE|L1 73605 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr20-3739 chr20 18360963 18361173 + 5.18 0.000 Intergenic Intergenic -17981 NR_034167 440757 Hs.120399 NM_001004344 ENSG00000237282 LINC00851 DZANK1-AS1 long intergenic non-protein coding RNA 851 ncRNA chr18-2724 chr18 69948823 69949033 + 5.18 0.000 intron (NM_006566, intron 1 of 6) intron (NM_006566, intron 1 of 6) -1055 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr3-7597 chr3 13115045 13115255 + 5.18 0.000 Intergenic Intergenic -41721 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr6-5746 chr6 154815827 154816037 + 5.18 0.000 intron (NM_014892, intron 13 of 19) intron (NM_014892, intron 13 of 19) -37428 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C - microRNA 1273c ncRNA chr3-6807 chr3 145578891 145579101 + 5.18 0.000 Intergenic MER50-int|LTR|ERV1 490189 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr6-3815 chr6 34398290 34398500 + 5.18 0.000 intron (NM_001202470, intron 5 of 8) SVA_F|Retroposon|SVA -5726 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr4-6904 chr4 14771299 14771509 + 5.18 0.000 intron (NR_126435, intron 2 of 6) MLT1H|LTR|ERVL-MaLR 116765 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr6-7050 chr6 26309792 26310002 + 5.18 0.000 Intergenic Intergenic -24398 NM_003543 8365 Hs.591790 NM_003543 ENSG00000158406 HIST1H4H H4/h|H4FH histone cluster 1 H4 family member h protein-coding chr3-5383 chr3 152291363 152291573 + 5.18 0.000 intron (NM_001314057, intron 1 of 11) intron (NM_001314057, intron 1 of 11) -7546 NM_001363870 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding chr3-9115 chr3 29915030 29915240 + 5.18 0.000 intron (NM_001003793, intron 10 of 14) intron (NM_001003793, intron 10 of 14) 19021 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr4-6675 chr4 2648145 2648355 + 5.18 0.000 intron (NM_001256668, intron 5 of 19) intron (NM_001256668, intron 5 of 19) 22818 NM_003704 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr6-8235 chr6 136964630 136964840 + 5.18 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 28496 NR_027994 100294720 Hs.520412 NR_027994 ENSG00000225391 NHEG1 - neuroblastoma highly expressed 1 ncRNA chrX-4086 chrX 23007339 23007549 + 5.18 0.000 intron (NR_073010, intron 3 of 11) THE1B-int|LTR|ERVL-MaLR 7484 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr2-13494 chr2 148898065 148898275 + 5.18 0.000 intron (NM_004522, intron 1 of 25) intron (NM_004522, intron 1 of 25) 22943 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr17-8167 chr17 61156108 61156318 + 5.18 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 211491 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr19-3801 chr19 4782284 4782494 + 5.18 0.000 Intergenic AluJb|SINE|Alu -9345 NM_018708 55527 Hs.515082 NM_018708 ENSG00000141965 FEM1A EPRAP fem-1 homolog A protein-coding chr9-8075 chr9 98144119 98144329 + 5.18 0.000 intron (NM_003389, intron 2 of 11) MIRb|SINE|MIR -25002 NM_014788 9830 Hs.575631 NM_014788 ENSG00000106785 TRIM14 - tripartite motif containing 14 protein-coding chr19-6810 chr19 41894740 41894950 + 5.18 0.000 intron (NM_198977, intron 10 of 27) MSR1|Satellite|Satellite 10402 NM_199002 9138 Hs.631550 NM_004706 ENSG00000076928 ARHGEF1 GEF1|IMD62|LBCL2|LSC|P115-RHOGEF|SUB1.5 Rho guanine nucleotide exchange factor 1 protein-coding chr22-2097 chr22 22791092 22791302 + 5.18 0.000 Intergenic L1MD2|LINE|L1 -31579 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr1-11756 chr1 19490931 19491141 + 5.18 0.000 Intergenic L2a|LINE|L2 -5497 NM_001206540 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr2-4528 chr2 36721555 36721765 + 5.18 0.000 intron (NM_001177969, intron 2 of 14) L2c|LINE|L2 24953 NM_001328661 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr5-6313 chr5 127211671 127211881 + 5.18 0.000 Intergenic Intergenic -78988 NM_001308121 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr1-12832 chr1 90691905 90692115 + 5.18 0.000 Intergenic Intergenic 25292 NM_020063 343472 Hs.451956 NM_020063 ENSG00000143032 BARHL2 - BarH like homeobox 2 protein-coding chr14-2691 chr14 79663122 79663332 + 5.18 0.000 intron (NR_073547, intron 15 of 20) (TG)n|Simple_repeat|Simple_repeat 383847 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr4-3919 chr4 153798493 153798703 + 5.18 0.000 Intergenic Intergenic -9515 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr6-6050 chr6 130945368 130945578 + 5.18 0.000 intron (NR_146620, intron 1 of 12) intron (NR_146620, intron 1 of 12) 25010 NM_001350310 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr15-3722 chr15 51824732 51824942 + 5.18 0.000 Intergenic AluSx|SINE|Alu -4816 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr11-8972 chr11 21023611 21023821 + 5.18 0.000 intron (NM_201551, intron 12 of 18) intron (NM_201551, intron 12 of 18) 354130 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr1-10410 chr1 157181612 157181822 + 5.18 0.000 Intergenic MIR3|SINE|MIR -43126 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr2-12117 chr2 35593132 35593342 + 5.18 0.000 Intergenic L1MC3|LINE|L1 121832 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr7-4966 chr7 149543292 149543502 + 5.18 0.000 Intergenic L1M5|LINE|L1 -45588 NM_152557 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr2-7370 chr2 3064846 3065056 + 5.18 0.000 intron (NR_110228, intron 3 of 6) intron (NR_110228, intron 3 of 6) 61075 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr1-12919 chr1 117648758 117648968 + 5.18 0.000 Intergenic L1PA5|LINE|L1 42815 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr5-5316 chr5 127152112 127152322 + 5.18 0.000 Intergenic MSTB2|LTR|ERVL-MaLR -78725 NM_001164479 401207 Hs.49573 NM_001164478 ENSG00000164241 C5orf63 YDR286C chromosome 5 open reading frame 63 protein-coding chr6-3624 chr6 113763466 113763676 + 5.18 0.000 Intergenic Intergenic -93774 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding chr13-3208 chr13 20955978 20956188 + 5.18 0.000 Intergenic AluSp|SINE|Alu -6655 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr10-5934 chr10 121161134 121161344 + 5.18 0.000 Intergenic L2-1_AMi|LINE|L2 309877 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr12-6193 chr12 20663066 20663276 + 5.18 0.000 intron (NM_000921, intron 15 of 15) THE1C-int|LTR|ERVL-MaLR -32184 NM_001145946 53919 Hs.47261 NM_017435 ENSG00000139155 SLCO1C1 OATP-F|OATP1|OATP14|OATP1C1|OATPF|OATPRP5|SLC21A14 solute carrier organic anion transporter family member 1C1 protein-coding chr2-11878 chr2 23327552 23327762 + 5.18 0.000 Intergenic Intergenic -57522 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr4-8617 chr4 172531706 172531916 + 5.18 0.000 intron (NM_001034845, intron 5 of 12) MER45C|DNA|hAT-Tip100 157106 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chrX-3192 chrX 43381665 43381875 + 5.18 0.000 Intergenic L1PBa|LINE|L1 204776 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr10-9069 chr10 124969010 124969220 + 5.18 0.000 intron (NM_017580, intron 2 of 8) MLT1F1|LTR|ERVL-MaLR 26992 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr16-3821 chr16 56076771 56076981 + 5.18 0.000 Intergenic AluSc|SINE|Alu 114218 NR_027078 283856 Hs.707433 NR_027078 ENSG00000246379 LOC283856 - uncharacterized LOC283856 ncRNA chr12-8029 chr12 113724572 113724782 + 5.18 0.000 Intergenic Intergenic 49006 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr3-7701 chr3 47688067 47688277 + 5.18 0.000 intron (NM_003074, intron 13 of 27) AluSp|SINE|Alu -26478 NR_145791 109623484 NR_145791 SNORD146 - small nucleolar RNA, C/D box 146 snoRNA chr1-15856 chr1 181500985 181501195 + 5.18 0.000 intron (NM_001205293, intron 1 of 47) intron (NM_001205293, intron 1 of 47) 17573 NM_001205294 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr4-8600 chr4 170338884 170339094 + 5.18 0.000 Intergenic Intergenic 112398 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA chr8-6312 chr8 46145324 46145534 + 5.18 0.000 Intergenic GSAT|Satellite|centr 472214 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr14-4882 chr14 71797714 71797924 + 5.18 0.000 Intergenic L1MC3|LINE|L1 -134352 NM_001204423 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr11-10611 chr11 124612506 124612716 + 5.18 0.000 intron (NM_052959, intron 1 of 3) intron (NM_052959, intron 1 of 3) 1183 NM_052959 116337 Hs.99235 NM_052959 ENSG00000154143 PANX3 PX3 pannexin 3 protein-coding chr3-6729 chr3 137881984 137882194 + 5.18 0.000 Intergenic Intergenic 110178 NR_109987 100507274 Hs.360349 NR_109987 ENSG00000239513 LINC01210 - long intergenic non-protein coding RNA 1210 ncRNA chr12-5379 chr12 120160076 120160286 + 5.18 0.000 exon (NM_006836, exon 23 of 58) exon (NM_006836, exon 23 of 58) -4682 NR_039719 100616179 NR_039719 ENSG00000266704 MIR4498 mir-4498 microRNA 4498 ncRNA chr6-3842 chr6 40821544 40821754 + 5.18 0.000 Intergenic Intergenic 201631 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr2-11231 chr2 165601603 165601813 + 5.18 0.000 intron (NM_024969, intron 2 of 4) (TTCC)n|Simple_repeat|Simple_repeat 29372 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr17-6294 chr17 45004965 45005175 + 5.18 0.000 Intergenic AluSx4|SINE|Alu -36767 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr4-5470 chr4 57144992 57145202 + 5.18 0.000 intron (NR_034081, intron 1 of 4) AluJb|SINE|Alu -34712 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr9-7327 chr9 12972667 12972877 + 5.18 0.000 promoter-TSS (NR_132976) promoter-TSS (NR_132976) -139 NR_132976 106635615 NR_132976 SNORD137 - small nucleolar RNA, C/D box 137 snoRNA chr21-1665 chr21 26408956 26409166 + 5.18 0.000 intron (NR_135515, intron 1 of 3) MIR3|SINE|MIR 3118 NR_135515 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chr3-10647 chr3 148463993 148464203 + 5.18 0.000 Intergenic Intergenic 183207 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chrX-3298 chrX 110797823 110798033 + 5.18 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -2111 NM_001367209 91851 Hs.496587 NM_145234 ENSG00000101938 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin like 1 protein-coding chr5-8364 chr5 121821738 121821948 + 5.18 0.000 Intergenic Intergenic -30039 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr8-7015 chr8 109692628 109692838 + 5.18 0.000 promoter-TSS (NM_001099744) promoter-TSS (NM_001099744) -942 NM_001099744 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr10-4909 chr10 21739406 21739616 + 5.18 0.000 intron (NM_004641, intron 22 of 23) L2a|LINE|L2 205339 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr3-9274 chr3 41611393 41611603 + 5.18 0.000 intron (NR_136342, intron 29 of 34) intron (NR_136342, intron 29 of 34) 350605 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr7-8521 chr7 54670798 54671008 + 5.18 0.000 Intergenic Intergenic 88308 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr6-4369 chr6 20913074 20913284 + 5.18 0.000 intron (NM_017774, intron 9 of 15) MLT1F2|LTR|ERVL-MaLR 378722 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr3-7145 chr3 185207117 185207327 + 5.18 0.000 intron (NM_001966, intron 5 of 6) AluJb|SINE|Alu 44321 NR_038990 339926 Hs.567848 NR_038990 ENSG00000223358 EHHADH-AS1 - EHHADH antisense RNA 1 ncRNA chr22-2364 chr22 44594159 44594369 + 5.18 0.000 Intergenic Intergenic 24924 NR_028409 388910 Hs.332685 NM_001012986 ENSG00000187012 LINC00207 NCRNA00207 long intergenic non-protein coding RNA 207 ncRNA chr3-7618 chr3 18890489 18890699 + 5.18 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -257916 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr7-3986 chr7 137826001 137826211 + 5.18 0.000 intron (NM_001321708, intron 1 of 32) intron (NM_001321708, intron 1 of 32) 20226 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr1-15552 chr1 158360524 158360734 + 5.18 0.000 Intergenic L2a|LINE|L2 6735 NM_001185108 913 Hs.249217 NM_030893 ENSG00000158488 CD1E CD1A|R2 CD1e molecule protein-coding chrX-3609 chrX 84309524 84309734 + 5.18 0.000 Intergenic L1MA1|LINE|L1 -83801 NR_031690 100302191 NR_031690 ENSG00000221494 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA chr5-9089 chr5 172330559 172330769 + 5.18 0.000 intron (NM_001308175, intron 12 of 12) MER103C|DNA|hAT-Charlie 45067 NR_130933 100288254 Hs.531911 NM_001007542 LOC100288254 - uncharacterized LOC100288254 ncRNA chr20-4338 chr20 53915888 53916098 + 5.18 0.000 Intergenic Intergenic -40284 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr20-4105 chr20 40980874 40981084 + 5.18 0.000 intron (NR_145525, intron 1 of 2) L1MA3|LINE|L1 266 NR_145524 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr2-11679 chr2 7829549 7829759 + 5.18 0.000 Intergenic AluSx1|SINE|Alu 70001 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr7-9489 chr7 136348774 136348984 + 5.18 0.000 Intergenic Intergenic -371520 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr19-4083 chr19 13575105 13575315 + 5.18 0.000 Intergenic MIR1_Amn|SINE|MIR -68731 NM_023035 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr5-8397 chr5 126224853 126225063 + 5.18 0.000 Intergenic HERV9-int|LTR|ERV1 45381 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr3-8374 chr3 88320406 88320616 + 5.18 0.000 Intergenic Intergenic -17945 NM_001368165 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr13-2613 chr13 75656704 75656914 + 5.18 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 20479 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chrX-2915 chrX 151702823 151703033 + 5.18 0.000 Intergenic Intergenic 4621 NR_033262 79057 Hs.209253 NM_024082 ENSG00000130032 PRRG3 PRGP3|TMG3 proline rich and Gla domain 3 protein-coding chr7-5602 chr7 50340038 50340248 + 5.18 0.000 intron (NM_001291840, intron 2 of 2) intron (NM_001291840, intron 2 of 2) 21095 NM_001291842 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr3-8703 chr3 187170327 187170537 + 5.18 0.000 Intergenic AluSg|SINE|Alu -27054 NM_153708 132112 Hs.518480 NM_153708 ENSG00000175077 RTP1 Z3CXXC1 receptor transporter protein 1 protein-coding chr12-6837 chr12 14150963 14151173 + 5.18 0.000 Intergenic Intergenic -170712 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr10-6780 chr10 2782984 2783194 + 5.18 0.000 Intergenic L2|LINE|L2 -281627 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr1-6752 chr1 68322445 68322655 + 5.18 0.000 Intergenic Intergenic -90004 NM_001193334 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chr11-7266 chr11 20940041 20940251 + 5.18 0.000 intron (NM_201551, intron 10 of 18) (TCTC)n|Simple_repeat|Simple_repeat 270560 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr15-4528 chr15 55034128 55034338 + 5.18 0.000 Intergenic Intergenic -22514 NR_135679 105370829 Hs.174934 NR_135679 ENSG00000260937 LOC105370829 - uncharacterized LOC105370829 ncRNA chr13-2227 chr13 24560733 24560943 + 5.18 0.000 Intergenic LTR12C|LTR|ERV1 -19118 NR_158453 105370295 NR_158453 LOC105370295 - uncharacterized LOC105370295 ncRNA chr17-7396 chr17 8366286 8366496 + 5.18 0.000 Intergenic Intergenic 5149 NM_213597 124751 Hs.304604 NM_213597 ENSG00000184619 KRBA2 - KRAB-A domain containing 2 protein-coding chr7-7214 chr7 20798152 20798362 + 5.18 0.000 Intergenic CpG -11371 NM_198956 221833 Hs.195922 NM_182700 ENSG00000164651 SP8 BTD Sp8 transcription factor protein-coding chr11-10036 chr11 82688565 82688775 + 5.18 0.000 Intergenic L2a|LINE|L2 45194 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr12-7873 chr12 105337579 105337789 + 5.18 0.000 intron (NM_001145199, intron 1 of 5) LTR8B|LTR|ERV1 6993 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr1-13629 chr1 10155941 10156151 + 5.18 0.000 intron (NM_006048, intron 20 of 26) AluSx1|SINE|Alu -54524 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr11-6556 chr11 70755888 70756098 + 5.18 0.000 intron (NM_012309, intron 13 of 24) intron (NM_012309, intron 13 of 24) -94152 NR_110766 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr19-5541 chr19 52094747 52094957 + 5.18 0.000 promoter-TSS (NM_001352299) promoter-TSS (NM_001352299) -581 NM_001352299 284371 Hs.665751 NM_001136499 ENSG00000197608 ZNF841 - zinc finger protein 841 protein-coding chrX-5294 chrX 142146685 142146895 + 5.18 0.000 Intergenic Intergenic 58500 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr15-4801 chr15 72375463 72375673 + 5.18 0.000 promoter-TSS (NR_027262) promoter-TSS (NR_027262) 446 NM_001318825 3073 Hs.604479 NM_000520 ENSG00000213614 HEXA TSD hexosaminidase subunit alpha protein-coding chr8-6552 chr8 69508674 69508884 + 5.18 0.000 intron (NR_156414, intron 2 of 20) intron (NR_156414, intron 2 of 20) 15932 NM_001128206 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr4-6318 chr4 87926147 87926357 + 5.18 0.000 Intergenic ERVL-E-int|LTR|ERVL -49398 NM_001040060 6696 Hs.313 NM_000582 ENSG00000118785 SPP1 BNSP|BSPI|ETA-1|OPN secreted phosphoprotein 1 protein-coding chr11-4526 chr11 118331337 118331547 + 5.18 0.000 Intergenic SVA_F|Retroposon|SVA 11263 NM_001040651 915 Hs.504048 NM_000732 ENSG00000167286 CD3D CD3-DELTA|IMD19|T3D CD3d molecule protein-coding chr2-10901 chr2 70218096 70218306 + 5.18 0.000 intron (NR_147232, intron 5 of 10) L2a|LINE|L2 -27182 NM_001348761 54980 Hs.720049 NM_017880 ENSG00000115998 C2orf42 - chromosome 2 open reading frame 42 protein-coding chr1-14824 chr1 74302444 74302654 + 5.18 0.000 intron (NM_015978, intron 5 of 24) Tigger1|DNA|TcMar-Tigger 67162 NM_015978 51086 Hs.480085 NM_015978 ENSG00000116783 TNNI3K CARK|CCDD TNNI3 interacting kinase protein-coding chr14-4179 chr14 82319802 82320012 + 5.18 0.000 Intergenic L1PA7|LINE|L1 -322725 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr7-5550 chr7 45821410 45821620 + 5.18 0.000 Intergenic AluSq2|SINE|Alu 16286 NR_146388 730234 Hs.714106 NR_146388 LOC730234 - uncharacterized LOC730234 ncRNA chr19-4633 chr19 14776977 14777187 + 5.18 0.000 promoter-TSS (NM_001271052) promoter-TSS (NM_001271052) -155 NM_001271052 30817 Hs.531619 NM_013447 ENSG00000127507 ADGRE2 CD312|CD97|EMR2|VBU adhesion G protein-coupled receptor E2 protein-coding chr9-8192 chr9 107593733 107593943 + 5.18 0.000 Intergenic Intergenic -104069 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chrX-4002 chrX 16028916 16029126 + 5.18 0.000 Intergenic LOR1b|LTR|ERV1 -94544 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr8-3939 chr8 43191390 43191600 + 5.18 0.000 exon (NM_001363229, exon 11 of 17) exon (NM_001363229, exon 11 of 17) 51031 NM_001363228 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr2-8615 chr2 143179975 143180185 + 5.18 0.000 intron (NM_018460, intron 2 of 13) Tigger1|DNA|TcMar-Tigger 50661 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr1-7408 chr1 37685284 37685494 + 5.18 0.000 intron (NM_001350764, intron 3 of 4) AluJb|SINE|Alu 5140 NM_001350756 54955 Hs.272673 NM_017850 ENSG00000116922 C1orf109 - chromosome 1 open reading frame 109 protein-coding chr14-3541 chr14 104640370 104640580 + 5.18 0.000 Intergenic Intergenic 25083 NR_135293 101929634 Hs.532502 NR_135293 ENSG00000260792 LINC02280 - long intergenic non-protein coding RNA 2280 ncRNA chr8-5570 chr8 81018628 81018838 + 5.18 0.000 intron (NM_018440, intron 3 of 8) THE1B|LTR|ERVL-MaLR 93335 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr4-6885 chr4 12898214 12898424 + 5.18 0.000 Intergenic Intergenic 586021 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr10-4812 chr10 10706340 10706550 + 5.18 0.000 intron (NM_001326317, intron 2 of 14) intron (NM_001326317, intron 2 of 14) 88469 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo chr7-8951 chr7 97575245 97575455 + 5.18 0.000 Intergenic AluSx|SINE|Alu -156736 NM_013997 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding chr15-3891 chr15 96888945 96889155 + 5.18 0.000 Intergenic Intergenic 105615 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr4-6410 chr4 124278362 124278572 + 5.18 0.000 Intergenic AluSg|SINE|Alu 279967 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr11-8345 chr11 78212887 78213097 + 5.18 0.000 intron (NM_020798, intron 10 of 10) intron (NM_020798, intron 10 of 10) 24073 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr12-4271 chr12 120418507 120418717 + 5.18 0.000 Intergenic Intergenic -19501 NM_004373 1337 Hs.369624 NM_004373 ENSG00000111775 COX6A1 CMTRID|COX6A|COX6AL cytochrome c oxidase subunit 6A1 protein-coding chr17-6579 chr17 48704472 48704682 + 5.18 0.000 Intergenic Intergenic 17941 NM_032391 84366 Hs.116467 NM_032391 ENSG00000159182 PRAC1 C17orf92|PRAC PRAC1 small nuclear protein protein-coding chr13-963 chr13 113107724 113107934 + 5.18 0.000 intron (NM_000131, intron 2 of 8) CpG 2038 NR_051961 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr2-6500 chr2 180955629 180955839 + 5.18 0.000 Intergenic Intergenic -24651 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr2-10627 chr2 11325124 11325334 + 5.18 0.000 intron (NM_001321643, intron 1 of 32) MER8|DNA|TcMar-Tigger 19407 NM_004850 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr3-8787 chr3 5271979 5272189 + 5.18 0.000 Intergenic MIR3|SINE|MIR -21829 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr17-8434 chr17 76554256 76554466 + 5.18 0.000 Intergenic LTR88b|LTR|Gypsy? -3403 NR_038109 100507246 Hs.288215 NR_038108 ENSG00000163597 SNHG16 Nbla10727|Nbla12061|ncRAN small nucleolar RNA host gene 16 ncRNA chr10-7378 chr10 2775958 2776168 + 5.18 0.000 Intergenic (AGAAGGC)n|Simple_repeat|Simple_repeat -274601 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr2-5314 chr2 74394074 74394284 + 5.18 0.000 TTS (NR_158172) TTS (NR_158172) -2092 NR_033935 1639 Hs.516111 NM_004082 ENSG00000204843 DCTN1 DAP-150|DP-150|P135 dynactin subunit 1 protein-coding chr4-4252 chr4 19148631 19148841 + 5.18 0.000 Intergenic MIRc|SINE|MIR -1103169 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr8-7423 chr8 140427937 140428147 + 5.18 0.000 intron (NM_001160372, intron 4 of 22) intron (NM_001160372, intron 4 of 22) 29702 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr6-6873 chr6 10852632 10852842 + 5.18 0.000 Intergenic L1MEb|LINE|L1 -14182 NM_001242385 4117 Hs.446125 NM_005906 ENSG00000111837 MAK RP62 male germ cell associated kinase protein-coding ML143364.1-3 ML143364.1 68709 68919 + 5.18 0.000 NA NA NA NA chr4-6661 chr4 2305378 2305588 + 5.18 0.000 exon (NM_001172656, exon 7 of 12) exon (NM_001172656, exon 7 of 12) -43374 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr11-9884 chr11 74433385 74433595 + 5.18 0.000 Intergenic L1M5|LINE|L1 34065 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 BRGDA6|HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr17-7421 chr17 10195388 10195598 + 5.18 0.000 intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) 3113 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr1-9817 chr1 59981586 59981796 + 5.18 0.000 Intergenic Intergenic -54893 NR_134981 1573 Hs.152096 NM_000775 ENSG00000134716 CYP2J2 CPJ2|CYPIIJ2 cytochrome P450 family 2 subfamily J member 2 protein-coding chr10-4304 chr10 14730747 14730957 + 5.18 0.000 intron (NM_031453, intron 1 of 4) MER81|DNA|hAT-Blackjack 44045 NM_001282695 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr6-8590 chr6 166159415 166159625 + 5.18 0.000 intron (NM_001366285, intron 7 of 7) MIR3|SINE|MIR 8331 NM_001366285 6862 Hs.389457 NM_003181 ENSG00000164458 TBXT SAVA|T|TFT T-box transcription factor T protein-coding chr12-2050 chr12 95947667 95947877 + 5.18 0.000 intron (NM_152435, intron 1 of 8) SVA_F|Retroposon|SVA 4441 NM_152435 144193 Hs.424907 NM_152435 ENSG00000139344 AMDHD1 HMFT1272 amidohydrolase domain containing 1 protein-coding chr13-4195 chr13 90892308 90892518 + 5.18 0.000 non-coding (NR_027039, exon 6 of 6) non-coding (NR_027039, exon 6 of 6) 34184 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr8-7382 chr8 138719821 138720031 + 5.18 0.000 intron (NM_152888, intron 27 of 64) intron (NM_152888, intron 27 of 64) 194115 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr14-4400 chr14 29987725 29987935 + 5.18 0.000 Intergenic Intergenic -59983 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr2-11468 chr2 231741685 231741895 + 5.18 0.000 intron (NM_002601, intron 1 of 4) HAL1|LINE|L1 28476 NR_036052 100302285 NR_036052 ENSG00000284378 MIR1244-1 MIR1244|MIRN1244|hsa-mir-1244|hsa-mir-1244-1 microRNA 1244-1 ncRNA chr9-5428 chr9 96442308 96442518 + 5.18 0.000 Intergenic Intergenic -7756 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr13-3457 chr13 110579596 110579806 + 5.18 0.000 Intergenic L1MDa|LINE|L1 -17979 NM_017817 55647 Hs.743563 NM_017817 ENSG00000139832 RAB20 - RAB20, member RAS oncogene family protein-coding chr3-5581 chr3 6721966 6722176 + 5.18 0.000 intron (NR_110123, intron 2 of 3) intron (NR_110123, intron 2 of 3) 83378 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr19-4010 chr19 3314599 3314809 + 5.18 0.000 Intergenic CpG -44926 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr11-9654 chr11 66870489 66870699 + 5.18 0.000 intron (NM_022172, intron 6 of 20) intron (NM_022172, intron 6 of 20) 13530 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr4-7722 chr4 89808858 89809068 + 5.18 0.000 intron (NM_001146054, intron 4 of 5) intron (NM_001146054, intron 4 of 5) -27438 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chrX-4583 chrX 71628143 71628353 + 5.18 0.000 Intergenic Intergenic -9737 NM_001142797 2833 Hs.198252 NM_001504 ENSG00000186810 CXCR3 CD182|CD183|CKR-L2|CMKAR3|GPR9|IP10-R|Mig-R|MigR C-X-C motif chemokine receptor 3 protein-coding chr2-10244 chr2 113876504 113876714 + 5.18 0.000 intron (NR_110174, intron 1 of 4) AluSx|SINE|Alu -13325 NR_102318 10096 Hs.433512 NM_005721 ENSG00000115091 ACTR3 ARP3 actin related protein 3 protein-coding chr6-8086 chr6 125140933 125141143 + 5.18 0.000 Intergenic Intergenic -12735 NM_003287 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr12-7338 chr12 55502614 55502824 + 5.18 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 10341 NM_001005519 403284 Hs.626886 NM_001005519 ENSG00000205327 OR6C68 - olfactory receptor family 6 subfamily C member 68 protein-coding chr6-5722 chr6 142647803 142648013 + 5.18 0.000 Intergenic Intergenic -10019 NR_027312 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr3-11004 chr3 179971466 179971676 + 5.18 0.000 intron (NM_001349396, intron 1 of 13) intron (NM_001349396, intron 1 of 13) 2654 NR_146167 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr12-4396 chr12 6039879 6040089 + 5.18 0.000 TTS (NR_145989) TTS (NR_145989) 199 NR_145989 109729112 NR_145989 SNORA120 - small nucleolar RNA, H/ACA box 120 snoRNA chr1-16521 chr1 230972074 230972284 + 5.18 0.000 intron (NM_024525, intron 1 of 22) intron (NM_024525, intron 1 of 22) 6682 NM_001122835 79573 Hs.424788 NM_024525 ENSG00000143643 TTC13 - tetratricopeptide repeat domain 13 protein-coding chr13-3537 chr13 23832062 23832272 + 5.18 0.000 intron (NM_005932, intron 14 of 18) MSTC|LTR|ERVL-MaLR -56701 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr5-5930 chr5 68660198 68660408 + 5.18 0.000 Intergenic L2|LINE|L2 367726 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr9-8365 chr9 117428345 117428555 + 5.18 0.000 Intergenic MIRb|SINE|MIR -13393 NM_014010 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr15-1717 chr15 89776672 89776882 + 5.18 0.000 exon (NM_001039958, exon 1 of 2) exon (NM_001039958, exon 1 of 2) 445 NM_001039958 145873 Hs.37311 NM_001039958 ENSG00000188095 MESP2 SCDO2|bHLHc6 mesoderm posterior bHLH transcription factor 2 protein-coding chr1-16641 chr1 240044730 240044940 + 5.18 0.000 Intergenic Intergenic 37311 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chrX-3167 chrX 27331459 27331669 + 5.18 0.000 Intergenic L1PA16|LINE|L1 131777 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr17-6823 chr17 12902332 12902542 + 5.18 0.000 intron (NM_001321164, intron 3 of 20) L2a|LINE|L2 14905 NR_039747 100616494 NR_039747 ENSG00000265503 MIR1269B - microRNA 1269b ncRNA chr16-7051 chr16 88590618 88590828 + 5.18 0.000 intron (NM_001294340, intron 4 of 18) AluSx1|SINE|Alu 20320 NM_001294340 124245 Hs.93670 NM_144604 ENSG00000158545 ZC3H18 NHN1 zinc finger CCCH-type containing 18 protein-coding chr3-7660 chr3 36166463 36166673 + 5.18 0.000 Intergenic Intergenic -213919 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr14-4095 chr14 67341381 67341591 + 5.18 0.000 intron (NM_015994, intron 7 of 8) SVA_A|Retroposon|SVA 18318 NM_015994 51382 Hs.272630 NM_015994 ENSG00000100554 ATP6V1D ATP6M|VATD|VMA8 ATPase H+ transporting V1 subunit D protein-coding ML143371.1-1 ML143371.1 2496303 2496513 + 5.18 0.000 NA NA NA NA chr13-1242 chr13 95552982 95553192 + 5.18 0.000 intron (NM_006984, intron 1 of 4) CpG 367 NM_006984 9071 Hs.534377 NM_006984 ENSG00000134873 CLDN10 CPETRL3|HELIX|OSP-L|OSPL claudin 10 protein-coding chr14-5091 chr14 86796075 86796285 + 5.18 0.000 Intergenic Intergenic -109598 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr14-5406 chr14 104247158 104247368 + 5.18 0.000 intron (NR_146612, intron 1 of 2) (GT)n|Simple_repeat|Simple_repeat 23679 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr4-6144 chr4 29717273 29717483 + 5.18 0.000 Intergenic L1MA6|LINE|L1 503086 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr5-8355 chr5 120970480 120970690 + 5.18 0.000 Intergenic L1PA7|LINE|L1 -351965 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr5-9170 chr5 177539560 177539770 + 5.18 0.000 intron (NM_001190946, intron 1 of 8) intron (NM_001190946, intron 1 of 8) 14430 NM_001366499 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr1-14440 chr1 45969447 45969657 + 5.18 0.000 intron (NM_001324320, intron 5 of 29) MER1A|DNA|hAT-Charlie 105204 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr15-5026 chr15 82881235 82881445 + 5.18 0.000 intron (NM_004839, intron 2 of 8) intron (NM_004839, intron 2 of 8) 71380 NM_199330 9455 Hs.578443 NM_004839 ENSG00000103942 HOMER2 ACPD|CPD|DFNA68|HOMER-2|VESL-2 homer scaffold protein 2 protein-coding chr10-8592 chr10 96389852 96390062 + 5.18 0.000 intron (NM_012465, intron 13 of 20) intron (NM_012465, intron 13 of 20) -30592 NM_001284322 93377 Hs.12449 NM_033207 ENSG00000197430 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding chr11-10528 chr11 119981931 119982141 + 5.18 0.000 Intergenic Intergenic 146817 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr21-1034 chr21 24754123 24754333 + 5.18 0.000 Intergenic Intergenic -86322 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LINC01692 - long intergenic non-protein coding RNA 1692 ncRNA chr8-1960 chr8 60028070 60028280 + 5.18 0.000 Intergenic Intergenic 253225 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chrX-5341 chrX 148113890 148114100 + 5.18 0.000 Intergenic Intergenic 132658 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding chr9-6869 chr9 81871741 81871951 + 5.18 0.000 Intergenic Intergenic -41591 NR_026851 347127 Hs.215235 NM_198509 ENSG00000240632 SPATA31D5P FAM75D5|FAM75D5P SPATA31 subfamily D member 5, pseudogene pseudo chr14-3385 chr14 94549646 94549856 + 5.18 0.000 Intergenic MER5A|DNA|hAT-Charlie -11691 NM_001289033 5267 Hs.719893 NM_006215 ENSG00000100665 SERPINA4 KAL|KLST|KST|PI-4|PI4|kallistatin serpin family A member 4 protein-coding chr5-6255 chr5 95653039 95653249 + 5.18 0.000 non-coding (NR_125327, exon 9 of 9) non-coding (NR_125327, exon 9 of 9) 6265 NM_001131065 317671 Hs.399758 NM_173362 ENSG00000175449 RFESD - Rieske Fe-S domain containing protein-coding chr6-4889 chr6 90998786 90998996 + 5.18 0.000 Intergenic AluSx|SINE|Alu -411819 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr19-6506 chr19 18117973 18118183 + 5.18 0.000 intron (NM_015016, intron 2 of 26) CpG -19262 NM_001290024 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr15-5176 chr15 93003675 93003885 + 5.18 0.000 intron (NM_001271, intron 33 of 38) L1ME3Cz|LINE|L1 69376 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr19-4796 chr19 34691025 34691235 + 5.18 0.000 Intergenic L1MEc|LINE|L1 13452 NM_001289187 55900 Hs.436350 NM_018443 ENSG00000089335 ZNF302 HSD16|MST154|MSTP154|ZNF135L|ZNF140L|ZNF327 zinc finger protein 302 protein-coding chr2-14093 chr2 199820637 199820847 + 5.18 0.000 intron (NM_001363886, intron 3 of 4) intron (NM_001363886, intron 3 of 4) 30431 NM_001350853 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding chr7-6773 chr7 18667501 18667711 + 5.18 0.000 3' UTR (NM_001204148, exon 11 of 11) 3' UTR (NM_001204148, exon 11 of 11) 158336 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr8-5550 chr8 72997920 72998130 + 5.18 0.000 Intergenic LTR7|LTR|ERV1 -10839 NM_017489 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding chr4-6171 chr4 41029035 41029245 + 5.18 0.000 intron (NM_173075, intron 5 of 16) intron (NM_173075, intron 5 of 16) -171948 NM_001166054 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr9-5199 chr9 72525057 72525267 + 5.18 0.000 intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 3361 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr4-5596 chr4 187300634 187300844 + 5.18 0.000 Intergenic (TGTG)n|Simple_repeat|Simple_repeat -69909 NR_149103 105377602 Hs.582096 NR_149103 ENSG00000250042 LINC02514 - long intergenic non-protein coding RNA 2514 ncRNA chr13-3401 chr13 92335207 92335417 + 5.18 0.000 intron (NM_004466, intron 7 of 7) THE1B-int|LTR|ERVL-MaLR 16895 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr12-6543 chr12 114567347 114567557 + 5.18 0.000 Intergenic L1MB8|LINE|L1 116723 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr2-14724 chr2 238565462 238565672 + 5.18 0.000 Intergenic Intergenic -10068 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr1-13503 chr1 4735758 4735968 + 5.18 0.000 intron (NM_018836, intron 2 of 5) intron (NM_018836, intron 2 of 5) 81254 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr2-12745 chr2 84731419 84731629 + 5.18 0.000 intron (NM_001370, intron 61 of 76) L1M4b|LINE|L1 149560 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr10-7176 chr10 104786984 104787194 + 5.18 0.000 intron (NM_014978, intron 1 of 26) intron (NM_014978, intron 1 of 26) -120873 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr9-7905 chr9 88747507 88747717 + 5.18 0.000 Intergenic Intergenic -1707 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr9-3300 chr9 78074922 78075132 + 5.18 0.000 Intergenic HERVL40-int|LTR|ERVL -43216 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr5-3659 chr5 155010712 155010922 + 5.18 0.000 Intergenic Intergenic -2938 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr11-8283 chr11 71440283 71440493 + 5.18 0.000 intron (NM_001360, intron 6 of 8) (GATG)n|Simple_repeat|Simple_repeat 8005 NM_001163817 1717 Hs.503134 NM_001360 ENSG00000172893 DHCR7 SLOS 7-dehydrocholesterol reductase protein-coding chr8-3523 chr8 118424864 118425074 + 5.18 0.000 intron (NM_001349811, intron 3 of 4) AluY|SINE|Alu -196032 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chrX-3602 chrX 82479697 82479907 + 5.18 0.000 Intergenic L1MB3|LINE|L1 -1028488 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr9-5444 chr9 97570791 97571001 + 5.18 0.000 intron (NM_001166116, intron 8 of 9) Zaphod2|DNA|hAT-Tip100 62472 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr9-7574 chr9 35869377 35869587 + 5.18 0.000 TTS (NM_001004487) TTS (NM_001004487) 919 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chrX-4823 chrX 101973092 101973302 + 5.18 0.000 Intergenic L1PA15|LINE|L1 -41170 NM_001011657 84460 Hs.496512 NM_001011657 ENSG00000166432 ZMAT1 - zinc finger matrin-type 1 protein-coding chr17-7988 chr17 48729775 48729985 + 5.18 0.000 Intergenic Intergenic -1131 NM_006361 10481 Hs.66731 NM_006361 ENSG00000159184 HOXB13 HPC9|PSGD homeobox B13 protein-coding chrX-4230 chrX 38477136 38477346 + 5.18 0.000 Intergenic L1PB1|LINE|L1 -84237 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr10-6481 chr10 43443850 43444060 + 5.18 0.000 intron (NM_001355444, intron 1 of 3) AluSc8|SINE|Alu 6844 NM_001355444 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding chr15-4725 chr15 67814966 67815176 + 5.18 0.000 Intergenic Intergenic -10438 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr1-11272 chr1 5010937 5011147 + 5.18 0.000 Intergenic Intergenic 356433 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr6-8399 chr6 150538684 150538894 + 5.18 0.000 Intergenic AluJr|SINE|Alu -61096 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr5-8672 chr5 140858152 140858362 + 5.18 0.000 exon (NM_018901, exon 1 of 4) exon (NM_018901, exon 1 of 4) 2360 NM_018901 56139 Hs.199343 NM_018901 ENSG00000250120 PCDHA10 CNR8|CNRN8|CNRS8|CRNR8|PCDH-ALPHA10 protocadherin alpha 10 protein-coding chr13-3019 chr13 20351243 20351453 + 5.18 0.000 Intergenic L1MB7|LINE|L1 82498 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr14-3852 chr14 76730594 76730804 + 5.18 0.000 Intergenic MamGypLTR1a|LTR|Gypsy -30769 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr10-6668 chr10 104855490 104855700 + 5.18 0.000 intron (NM_014978, intron 2 of 26) L1MD2|LINE|L1 -189379 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr1-16568 chr1 234639024 234639234 + 5.18 0.000 Intergenic Intergenic -7160 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr7-6809 chr7 32116735 32116945 + 5.18 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -45404 NM_001322057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr14-3011 chr14 54555655 54555865 + 5.18 0.000 Intergenic Intergenic -11852 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr2-8165 chr2 85367815 85368025 + 5.18 0.000 intron (NR_138132, intron 6 of 12) AluY|SINE|Alu 13151 NM_001135021 84173 Hs.269990 NM_032213 ENSG00000115459 ELMOD3 DFNB88|LST3|RBED1|RBM29 ELMO domain containing 3 protein-coding chr6-5767 chr6 163689905 163690115 + 5.18 0.000 Intergenic Intergenic -18526 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr16-5524 chr16 24175933 24176143 + 5.18 0.000 intron (NM_002738, intron 12 of 16) L2|LINE|L2 -27078 NR_106996 102466247 NR_106996 ENSG00000274466 MIR1273H hsa-mir-1273h microRNA 1273h ncRNA chr10-9194 chr10 132129235 132129445 + 5.18 0.000 intron (NM_001323089, intron 3 of 22) intron (NM_001323089, intron 3 of 22) -57608 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr6-7552 chr6 70884423 70884633 + 5.18 0.000 intron (NM_080742, intron 2 of 3) L2c|LINE|L2 72532 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chrX-4506 chrX 65557929 65558139 + 5.18 0.000 Intergenic L1ME4b|LINE|L1 -5613 NR_033742 83957 Hs.652967 NR_033742 ENSG00000227942 FRMD8P1 - FERM domain containing 8 pseudogene 1 pseudo chr7-7275 chr7 33531813 33532023 + 5.18 0.000 intron (NM_198428, intron 20 of 22) L3|LINE|CR1 -372997 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr19-5451 chr19 33339275 33339485 + 5.18 0.000 Intergenic LTR16C|LTR|ERVL -34329 NM_001806 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr17-2864 chr17 31444162 31444372 + 5.18 0.000 intron (NM_032932, intron 3 of 14) intron (NM_032932, intron 3 of 14) -43841 NM_001346748 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr1-14130 chr1 31653667 31653877 + 5.18 0.000 intron (NM_001856, intron 69 of 70) (AC)n|Simple_repeat|Simple_repeat -8896 NM_012392 553115 Hs.470417 NM_012392 ENSG00000162517 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding chr18-3339 chr18 57073162 57073372 + 5.18 0.000 Intergenic Intergenic -1148 NR_152602 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr15-4224 chr15 27065469 27065679 + 5.18 0.000 intron (NM_001270873, intron 3 of 5) intron (NM_001270873, intron 3 of 5) 94393 NM_033223 2567 Hs.569475 NM_033223 ENSG00000182256 GABRG3 - gamma-aminobutyric acid type A receptor gamma3 subunit protein-coding chr3-9919 chr3 87042656 87042866 + 5.18 0.000 Intergenic L1MD2|LINE|L1 -46519 NR_104153 100846978 Hs.570649 NR_047469 ENSG00000281392 LINC00506 - long intergenic non-protein coding RNA 506 ncRNA chr2-8793 chr2 167563774 167563984 + 5.18 0.000 Intergenic SVA_D|Retroposon|SVA -254793 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr17-7040 chr17 61221516 61221726 + 5.18 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 146083 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr8-4375 chr8 102436129 102436339 + 5.18 0.000 Intergenic L1MEd|LINE|L1 -23534 NM_015902 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr1-15528 chr1 156947453 156947663 + 5.18 0.000 intron (NM_014784, intron 24 of 39) intron (NM_014784, intron 24 of 39) -11314 NR_030527 768220 NR_030527 ENSG00000211581 MIR765 MIRN765|hsa-mir-765|mir-765 microRNA 765 ncRNA chr13-3681 chr13 34981511 34981721 + 5.18 0.000 intron (NM_015678, intron 1 of 57) L1MEf|LINE|L1 39329 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr1-14037 chr1 27463954 27464164 + 5.18 0.000 intron (NM_006990, intron 1 of 8) intron (NM_006990, intron 1 of 8) 26108 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr10-5903 chr10 118924005 118924215 + 5.18 0.000 Intergenic AluSq|SINE|Alu -105604 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr17-4182 chr17 9965827 9966037 + 5.18 0.000 intron (NM_201432, intron 4 of 13) intron (NM_201432, intron 4 of 13) -6437 NM_003644 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr5-4322 chr5 155138272 155138482 + 5.18 0.000 Intergenic L1ME4a|LINE|L1 124622 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chrX-5000 chrX 118552593 118552803 + 5.18 0.000 intron (NM_144658, intron 6 of 52) intron (NM_144658, intron 6 of 52) 56789 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr8-6948 chr8 105099171 105099381 + 5.18 0.000 Intergenic Intergenic -219162 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr18-2446 chr18 32747339 32747549 + 5.18 0.000 intron (NM_020805, intron 2 of 8) MER1A|DNA|hAT-Charlie 25579 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr11-8834 chr11 12441988 12442198 + 5.18 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 64522 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr6-5883 chr6 42505602 42505812 + 5.18 0.000 Intergenic Charlie21a|DNA|hAT-Charlie -53483 NM_033502 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr13-4176 chr13 89088595 89088805 + 5.18 0.000 Intergenic L1PA2|LINE|L1 -146591 NR_047025 100874172 Hs.569291 NR_047025 LINC00440 - long intergenic non-protein coding RNA 440 ncRNA chr10-8494 chr10 89850492 89850702 + 5.18 0.000 Intergenic Intergenic -3309 NR_149080 105378425 Hs.559891 NR_149079 ENSG00000280560 LINC01374 TCONS_00018278 long intergenic non-protein coding RNA 1374 ncRNA chr1-15274 chr1 114969310 114969520 + 5.18 0.000 intron (NM_001282541, intron 27 of 31) L1PA7|LINE|L1 -60409 NM_000549 7252 Hs.406687 NM_000549 ENSG00000134200 TSHB TSH-B|TSH-BETA thyroid stimulating hormone subunit beta protein-coding chr6-2468 chr6 36742716 36742926 + 5.18 0.000 intron (NM_020939, intron 20 of 20) intron (NM_020939, intron 20 of 20) 14579 NM_001314020 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr21-977 chr21 5231386 5231596 + 5.18 0.000 Intergenic Intergenic -76833 NM_005049 5822 Hs.449076 NM_005049 ENSG00000241945 PWP2 EHOC-17|PWP2H|UTP1 PWP2 small subunit processome component protein-coding chr11-4311 chr11 68788456 68788666 + 5.18 0.000 intron (NM_001031847, intron 9 of 18) AluSz6|SINE|Alu -37041 NM_001039656 9633 Hs.145932 NM_004923 ENSG00000132749 TESMIN CXCDC2|MTL5|MTLT testis expressed metallothionein like protein protein-coding chr16-3432 chr16 88193187 88193397 + 5.18 0.000 promoter-TSS (NR_110944) promoter-TSS (NR_110944) -989 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr9-7537 chr9 34605781 34605991 + 5.18 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 6211 NM_148178 138716 Hs.15961 NM_148178 ENSG00000164967 RPP25L C9orf23|bA296L22.5 ribonuclease P/MRP subunit p25 like protein-coding chr2-13724 chr2 167846715 167846925 + 5.18 0.000 intron (NM_020981, intron 1 of 1) L1PB1|LINE|L1 28148 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr10-8990 chr10 120508190 120508400 + 5.18 0.000 intron (NM_001318169, intron 2 of 2) intron (NM_001318169, intron 2 of 2) 51341 NM_001030059 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr7-5456 chr7 39820048 39820258 + 5.18 0.000 Intergenic AluSz6|SINE|Alu 86585 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr7-9056 chr7 103766514 103766724 + 5.18 0.000 intron (NM_005045, intron 4 of 64) intron (NM_005045, intron 4 of 64) 222897 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chrX-4654 chrX 80261778 80261988 + 5.18 0.000 intron (NR_110646, intron 5 of 5) intron (NR_110646, intron 5 of 5) 73435 NR_110646 101060146 Hs.546064 NR_110646 ENSG00000278530 CHMP1B2P - charged multivesicular body protein 1B2, pseudogene pseudo chr3-4806 chr3 128999361 128999571 + 5.18 0.000 intron (NM_001348521, intron 1 of 15) intron (NM_001348521, intron 1 of 15) 1839 NM_001348522 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr10-7323 chr10 156599 156809 + 5.18 0.000 intron (NM_001370109, intron 1 of 13) intron (NM_001370109, intron 1 of 13) 20895 NM_001370109 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr18-3401 chr18 61659967 61660177 + 5.18 0.000 Intergenic Intergenic -88104 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr15-4235 chr15 33032122 33032332 + 5.18 0.000 intron (NM_001277313, intron 6 of 20) intron (NM_001277313, intron 6 of 20) 35947 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr2-14079 chr2 198916511 198916721 + 5.18 0.000 Intergenic Intergenic 541323 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr18-3570 chr18 79311957 79312167 + 5.18 0.000 intron (NR_148360, intron 16 of 31) intron (NR_148360, intron 16 of 31) -83868 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr13-3044 chr13 29491067 29491277 + 5.18 0.000 intron (NM_015233, intron 4 of 8) (GT)n|Simple_repeat|Simple_repeat -3422 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr14-4571 chr14 47851947 47852157 + 5.18 0.000 Intergenic L1PA10|LINE|L1 -57038 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr2-14196 chr2 207665595 207665805 + 5.18 0.000 intron (NR_135566, intron 1 of 3) intron (NR_135566, intron 1 of 3) 3270 NR_135567 102724714 Hs.443475 NR_135566 ENSG00000224137 LINC01857 - long intergenic non-protein coding RNA 1857 ncRNA chr8-3134 chr8 67168892 67169102 + 5.18 0.000 intron (NM_001363133, intron 21 of 27) intron (NM_001363133, intron 21 of 27) 85149 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr1-9464 chr1 35672492 35672702 + 5.18 0.000 Intergenic Intergenic -31071 NM_001199779 5690 Hs.471441 NM_002794 ENSG00000126067 PSMB2 HC7-I proteasome subunit beta 2 protein-coding chr9-6228 chr9 120104828 120105038 + 5.18 0.000 Intergenic L2a|LINE|L2 140117 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr14-3813 chr14 69549723 69549933 + 5.18 0.000 Intergenic Intergenic 25043 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr6-3384 chr6 49074060 49074270 + 5.18 0.000 Intergenic AluSp|SINE|Alu 389088 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr5-5672 chr5 159724723 159724933 + 5.18 0.000 Intergenic Intergenic 146556 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr20-3711 chr20 16267757 16267967 + 5.18 0.000 Intergenic Intergenic -281980 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr14-3240 chr14 75903807 75904017 + 5.18 0.000 intron (NM_015072, intron 31 of 31) AluJr|SINE|Alu 78083 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr21-1014 chr21 18730071 18730281 + 5.18 0.000 intron (NR_109925, intron 2 of 3) intron (NR_109925, intron 2 of 3) 29636 NR_109925 101927797 Hs.551743 NR_109925 MIR548XHG - MIR548X host gene ncRNA chr11-8713 chr11 6568510 6568720 + 5.18 0.000 intron (NM_144666, intron 38 of 42) intron (NM_144666, intron 38 of 42) 35001 NM_015324 23378 Hs.652255 NM_015324 ENSG00000132275 RRP8 KIAA0409|NML ribosomal RNA processing 8 protein-coding chr6-1705 chr6 24700329 24700539 + 5.18 0.000 intron (NM_018473, intron 2 of 2) AluSx1|SINE|Alu 18720 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding chr12-7078 chr12 42847114 42847324 + 5.18 0.000 Intergenic L1MA9|LINE|L1 155003 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr17-7271 chr17 3154095 3154305 + 5.18 0.000 intron (NR_147912, intron 3 of 3) intron (NR_147912, intron 3 of 3) 22735 NR_147912 100288728 Hs.579219 NR_147912 ENSG00000261848 LOC100288728 - uncharacterized LOC100288728 ncRNA chr16-4733 chr16 84169703 84169913 + 5.18 0.000 intron (NM_001318756, intron 3 of 7) intron (NM_001318756, intron 3 of 7) 10768 NM_001318756 123872 Hs.310164 NM_178452 ENSG00000154099 DNAAF1 CILD13|LRRC50|ODA7|swt dynein axonemal assembly factor 1 protein-coding chr20-3997 chr20 36126764 36126974 + 5.18 0.000 intron (NM_001258330, intron 3 of 20) intron (NM_001258330, intron 3 of 20) -27871 NM_012156 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr4-7068 chr4 30837222 30837432 + 5.18 0.000 intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 116958 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr5-4240 chr5 134732792 134733002 + 5.18 0.000 Intergenic Intergenic -5651 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr12-5048 chr12 88733330 88733540 + 5.18 0.000 Intergenic MIRc|SINE|MIR -152962 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr9-7326 chr9 12964282 12964492 + 5.18 0.000 Intergenic Intergenic 8246 NR_132976 106635615 NR_132976 SNORD137 - small nucleolar RNA, C/D box 137 snoRNA chr4-6990 chr4 22695041 22695251 + 5.18 0.000 intron (NR_102356, intron 1 of 2) MIR|SINE|MIR 2209 NR_102355 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr2-7440 chr2 11500996 11501206 + 5.18 0.000 Intergenic Intergenic -32944 NM_014668 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr1-14727 chr1 66008507 66008717 + 5.18 0.000 intron (NM_001037340, intron 1 of 14) L2a|LINE|L2 15996 NM_001037340 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr2-10622 chr2 10359833 10360043 + 5.18 0.000 intron (NM_001258357, intron 1 of 4) intron (NM_001258357, intron 1 of 4) -8740 NM_001258358 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr12-6600 chr12 125334768 125334978 + 5.18 0.000 intron (NM_052907, intron 1 of 8) MER45B|DNA|hAT-Tip100 8257 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr6-7432 chr6 53814710 53814920 + 5.18 0.000 intron (NM_018214, intron 1 of 13) Charlie19a|DNA|hAT-Charlie 19810 NM_018214 55227 Hs.606493 NM_018214 ENSG00000137269 LRRC1 LANO|dJ523E19.1 leucine rich repeat containing 1 protein-coding chr3-10820 chr3 163177585 163177795 + 5.18 0.000 non-coding (NR_033945, exon 7 of 7) non-coding (NR_033945, exon 7 of 7) 125611 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr8-4494 chr8 119259954 119260164 + 5.18 0.000 Intergenic L2a|LINE|L2 -13202 NR_149114 105375726 Hs.666095 NR_149111 MAL2-AS1 - MAL2 antisense RNA 1 ncRNA chr1-14924 chr1 85192765 85192975 + 5.18 0.000 intron (NM_032184, intron 1 of 6) intron (NM_032184, intron 1 of 6) 8146 NM_032184 84144 Hs.533853 NM_032184 ENSG00000097096 SYDE2 - synapse defective Rho GTPase homolog 2 protein-coding chrX-2020 chrX 15764171 15764381 + 5.18 0.000 intron (NR_160544, intron 5 of 11) AluJb|SINE|Alu 23313 NR_002725 8551 Hs.653287 NR_002725 ENSG00000281371 INE2 NCRNA00011 inactivation escape 2 ncRNA chrX-3596 chrX 80462843 80463053 + 5.18 0.000 Intergenic L1PA7|LINE|L1 42501 NM_152630 169966 Hs.367959 NM_152630 ENSG00000174016 TENT5D CT1.26|CT112|FAM46D terminal nucleotidyltransferase 5D protein-coding chr4-7597 chr4 81460228 81460438 + 5.18 0.000 intron (NM_152545, intron 1 of 13) intron (NM_152545, intron 1 of 13) 11574 NM_001300736 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr4-7196 chr4 41593130 41593340 + 5.18 0.000 intron (NM_001330786, intron 1 of 22) intron (NM_001330786, intron 1 of 22) -19474 NM_001330674 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr13-3390 chr13 88343907 88344117 + 5.18 0.000 Intergenic Intergenic -196817 NR_047021 100874168 Hs.126406 NR_047021 LINC00433 - long intergenic non-protein coding RNA 433 ncRNA chr19-5829 chr19 41119230 41119440 + 5.18 0.000 intron (NR_135528, intron 3 of 9) AluSx|SINE|Alu 4903 NR_135528 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr1-9987 chr1 83088086 83088296 + 5.18 0.000 intron (NR_147074, intron 7 of 10) HERVL40-int|LTR|ERVL -101983 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chr11-4424 chr11 90484410 90484620 + 5.18 0.000 intron (NR_104190, intron 1 of 6) L2|LINE|L2 71342 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA chr16-6578 chr16 66490059 66490269 + 5.18 0.000 intron (NM_001197224, intron 4 of 4) AluSx|SINE|Alu -13762 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr2-9503 chr2 236674716 236674926 + 5.18 0.000 Intergenic Intergenic 104996 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr2-9703 chr2 50366026 50366236 + 5.18 0.000 intron (NM_001330093, intron 17 of 22) intron (NM_001330093, intron 17 of 22) -18375 NM_138735 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr5-7106 chr5 181231169 181231379 + 5.18 0.000 intron (NM_201627, intron 2 of 7) intron (NM_201627, intron 2 of 7) 7993 NR_045218 90933 Hs.441488 NM_033549 ENSG00000146063 TRIM41 RINCK tripartite motif containing 41 protein-coding chr12-5647 chr12 75366512 75366722 + 5.18 0.000 intron (NM_152779, intron 4 of 4) MER4B-int|LTR|ERV1 24284 NM_001355031 84698 Hs.733835 NM_032606 ENSG00000180881 CAPS2 UG0636c06 calcyphosine 2 protein-coding chr7-7606 chr7 131828039 131828249 + 5.18 0.000 Intergenic MER58A|DNA|hAT-Charlie -82076 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr10-8134 chr10 70322290 70322500 + 5.18 0.000 intron (NM_018205, intron 3 of 3) intron (NM_018205, intron 3 of 3) -38391 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr3-7666 chr3 37654867 37655077 + 5.18 0.000 intron (NM_002207, intron 17 of 27) L1PA7|LINE|L1 202831 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr2-10193 chr2 96965631 96965841 + 5.18 0.000 intron (NM_001122646, intron 5 of 16) AluJo|SINE|Alu 20844 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr14-2178 chr14 96215923 96216133 + 5.18 0.000 intron (NM_000623, intron 1 of 2) intron (NM_000623, intron 1 of 2) 11230 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr2-13134 chr2 117985149 117985359 + 5.18 0.000 intron (NM_019044, intron 7 of 23) intron (NM_019044, intron 7 of 23) 28816 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr3-6398 chr3 98316709 98316919 + 5.18 0.000 Intergenic LTR5B|LTR|ERVK 33926 NM_001005482 79310 Hs.554711 NM_001005482 ENSG00000197938 OR5H2 OR3-10 olfactory receptor family 5 subfamily H member 2 protein-coding chr7-6426 chr7 157557228 157557438 + 5.18 0.000 intron (NM_130843, intron 20 of 21) (AC)n|Simple_repeat|Simple_repeat 17089 NR_029689 406945 NR_029689 ENSG00000207960 MIR153-2 MIRN153-2|mir-153-2 microRNA 153-2 ncRNA chr1-8037 chr1 235575828 235576038 + 5.18 0.000 intron (NM_004485, intron 2 of 2) intron (NM_004485, intron 2 of 2) -71481 NM_001277155 148789 Hs.498143 NM_152490 ENSG00000162885 B3GALNT2 B3GalNAc-T2|MDDGA11 beta-1,3-N-acetylgalactosaminyltransferase 2 protein-coding chr8-5881 chr8 15656826 15657036 + 5.18 0.000 intron (NM_001356429, intron 3 of 10) MLT1A1-int|LTR|ERVL-MaLR 116668 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr8-2234 chr8 28665313 28665523 + 5.18 0.000 Intergenic AluJo|SINE|Alu 36046 NR_126027 101929402 Hs.667366 NR_126027 ENSG00000246339 EXTL3-AS1 C8orf50 EXTL3 antisense RNA 1 ncRNA chr4-8482 chr4 159290623 159290833 + 5.18 0.000 intron (NM_001351727, intron 1 of 24) intron (NM_001351727, intron 1 of 24) 22919 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr1-15192 chr1 109756102 109756312 + 5.18 0.000 intron (NM_133181, intron 12 of 18) intron (NM_133181, intron 12 of 18) 7716 NM_133181 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr3-8620 chr3 169509331 169509541 + 5.18 0.000 intron (NM_001366473, intron 1 of 15) L1MB3|LINE|L1 61569 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr2-13118 chr2 114547106 114547316 + 5.18 0.000 intron (NM_001321908, intron 2 of 25) MER45C|DNA|hAT-Tip100 85634 NM_001321908 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr20-4494 chr20 63126818 63127028 + 5.18 0.000 Intergenic L1MC2|LINE|L1 -24604 NR_003245 768097 Hs.635159 NR_003245 ENSG00000231133 HAR1B HAR1R|LINC00065|NCRNA00065 highly accelerated region 1B ncRNA chr21-1533 chr21 45741619 45741829 + 5.18 0.000 intron (NM_001348241, intron 2 of 16) intron (NM_001348241, intron 2 of 16) -6290 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr21-1366 chr21 38387026 38387236 + 5.18 0.000 intron (NM_001136155, intron 8 of 8) intron (NM_001136155, intron 8 of 8) -41055 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr17-6686 chr17 77923368 77923578 + 5.18 0.000 Intergenic Intergenic -39386 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr11-10695 chr11 129349684 129349894 + 5.18 0.000 Intergenic L1MC4|LINE|L1 -26059 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr6-3884 chr6 56720855 56721065 + 5.18 0.000 intron (NM_001144770, intron 3 of 94) SVA_B|Retroposon|SVA -78071 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr3-9084 chr3 27570413 27570623 + 5.18 0.000 Intergenic LTR16C|LTR|ERVL -86134 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr2-10777 chr2 43124171 43124381 + 5.18 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -21831 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chr9-6424 chr9 70772979 70773189 + 5.18 0.000 intron (NM_001366143, intron 7 of 25) MamTip3|DNA|hAT-Tip100 37000 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr2-14340 chr2 218240277 218240487 + 5.18 0.000 intron (NM_152862, intron 7 of 10) intron (NM_152862, intron 7 of 10) -19114 NM_001321950 151306 Hs.160954 NM_170699 ENSG00000179921 GPBAR1 BG37|GPCR19|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding chr1-12474 chr1 18599758 18599968 + 5.18 0.000 Intergenic MIR3|SINE|MIR -30983 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chrX-2812 chrX 134969791 134970001 + 5.18 0.000 Intergenic Intergenic 20347 NR_134925 340581 Hs.434754 NR_134925 ENSG00000236091 LINC02243 - long intergenic non-protein coding RNA 2243 ncRNA chr8-5915 chr8 17909464 17909674 + 5.18 0.000 Intergenic HERVK-int|LTR|ERVK -13288 NM_001352660 5108 Hs.491148 NM_006197 ENSG00000078674 PCM1 PTC4|RET/PCM-1 pericentriolar material 1 protein-coding chr6-7224 chr6 40347584 40347794 + 5.18 0.000 intron (NR_038887, intron 1 of 2) intron (NR_038887, intron 1 of 2) 8317 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr12-7794 chr12 97522461 97522671 + 5.18 0.000 intron (NR_024037, intron 7 of 8) intron (NR_024037, intron 7 of 8) 30657 NR_031653 100302289 NR_031653 ENSG00000221479 MIR1251 MIRN1251|hsa-mir-1251 microRNA 1251 ncRNA chr8-3036 chr8 140139859 140140069 + 5.18 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -39429 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr18-3537 chr18 76397612 76397822 + 5.18 0.000 intron (NM_014643, intron 3 of 6) AluJb|SINE|Alu -93935 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr5-7750 chr5 60614312 60614522 + 5.18 0.000 intron (NM_001145208, intron 7 of 9) AluJo|SINE|Alu 85749 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr14-2347 chr14 21229217 21229427 + 5.18 0.000 intron (NM_031314, intron 5 of 8) AluY|SINE|Alu -22422 NR_038971 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA chr1-6796 chr1 87352948 87353158 + 5.18 0.000 TTS (NR_038324) TTS (NR_038324) 18602 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr8-5116 chr8 64580196 64580406 + 5.18 0.000 promoter-TSS (NM_152414) promoter-TSS (NM_152414) -64 NM_152414 27319 Hs.388788 NM_152414 ENSG00000180828 BHLHE22 BHLHB5|Beta3|Beta3a|CAGL85|TNRC20 basic helix-loop-helix family member e22 protein-coding chr2-13907 chr2 181601395 181601605 + 5.18 0.000 intron (NR_027690, intron 2 of 11) AluSx1|SINE|Alu 55605 NM_201548 375298 Hs.732358 NM_201548 ENSG00000188452 CERKL RP26 ceramide kinase like protein-coding chr19-6805 chr19 41799029 41799239 + 5.18 0.000 intron (NM_001815, intron 2 of 6) MSTB|LTR|ERVL-MaLR 2547 NR_102333 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr2-13682 chr2 164069514 164069724 + 5.18 0.000 Intergenic Intergenic -333611 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr3-11038 chr3 182816085 182816295 + 5.18 0.000 intron (NM_014616, intron 1 of 29) intron (NM_014616, intron 1 of 29) 22686 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr20-3610 chr20 5627561 5627771 + 5.18 0.000 Intergenic Intergenic -16660 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr8-7306 chr8 132573783 132573993 + 5.18 0.000 intron (NR_135913, intron 10 of 10) intron (NR_135913, intron 10 of 10) -12409 NR_026684 93668 Hs.545218 NR_026684 ENSG00000253521 HPYR1 HPRG1|LINC00027|NCRNA00027 Helicobacter pylori responsive 1 ncRNA chr2-13215 chr2 122508840 122509050 + 5.18 0.000 Intergenic Intergenic 564536 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr22-3387 chr22 32660427 32660637 + 5.18 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -140284 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr1-12053 chr1 116243029 116243239 + 5.18 0.000 Intergenic Intergenic -130110 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr20-4407 chr20 59005377 59005587 + 5.18 0.000 intron (NM_001336, intron 2 of 5) intron (NM_001336, intron 2 of 5) 1772 NM_001336 1522 Hs.252549 NM_001336 ENSG00000101160 CTSZ CTSX cathepsin Z protein-coding chr4-7079 chr4 31908424 31908634 + 5.18 0.000 Intergenic Intergenic -88850 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA chr1-13341 chr1 246363141 246363351 + 5.18 0.000 intron (NM_001167740, intron 1 of 11) SVA_D|Retroposon|SVA 54166 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr13-2448 chr13 49062321 49062531 + 5.18 0.000 intron (NM_001079673, intron 2 of 25) L2c|LINE|L2 -47891 NM_014923 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr6-8443 chr6 153073302 153073512 + 5.18 0.000 intron (NM_012419, intron 1 of 4) intron (NM_012419, intron 1 of 4) 57875 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr10-7150 chr10 101589022 101589232 + 5.18 0.000 promoter-TSS (NM_001308382) promoter-TSS (NM_001308382) 806 NM_001329745 25911 Hs.658128 NM_015448 ENSG00000166171 DPCD - deleted in primary ciliary dyskinesia homolog (mouse) protein-coding chr11-7644 chr11 61949397 61949607 + 5.18 0.000 promoter-TSS (NM_004183) promoter-TSS (NM_004183) -319 NM_001363592 7439 Hs.524910 NM_004183 ENSG00000167995 BEST1 ARB|BEST|BMD|Best1V1Delta2|RP50|TU15B|VMD2 bestrophin 1 protein-coding chr4-3686 chr4 49575323 49575533 + 5.18 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 588786 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr6-5027 chr6 111177652 111177862 + 5.18 0.000 intron (NM_018593, intron 3 of 5) intron (NM_018593, intron 3 of 5) 63923 NR_145796 109623478 NR_145796 SNORD166 - small nucleolar RNA, C/D box 166 snoRNA chr4-8046 chr4 120584170 120584380 + 5.18 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 338591 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr13-3517 chr13 22011531 22011741 + 5.18 0.000 Intergenic Intergenic -133476 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr12-7562 chr12 72770129 72770339 + 5.18 0.000 Intergenic MLT1F-int|LTR|ERVL-MaLR -388956 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LINC02444 - long intergenic non-protein coding RNA 2444 ncRNA chr22-3325 chr22 20784792 20785002 + 5.18 0.000 intron (NM_000185, intron 3 of 4) intron (NM_000185, intron 3 of 4) 10784 NM_000185 3053 Hs.474270 NM_000185 ENSG00000099937 SERPIND1 D22S673|HC2|HCF2|HCII|HLS2|LS2|THPH10 serpin family D member 1 protein-coding chr8-5368 chr8 21884386 21884596 + 5.18 0.000 Intergenic AluSz|SINE|Alu 29199 NM_003974 9046 Hs.71215 NM_003974 ENSG00000147443 DOK2 p56DOK|p56dok-2 docking protein 2 protein-coding chr8-6006 chr8 22841377 22841587 + 5.18 0.000 intron (NM_001363233, intron 3 of 6) CR1_Mam|LINE|CR1 -36490 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr4-8670 chr4 179496704 179496914 + 5.18 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -1588873 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chrX-2050 chrX 18354118 18354328 + 5.18 0.000 intron (NR_033717, intron 1 of 15) CpG 465 NR_033717 10389 Hs.495774 NM_006089 ENSG00000102098 SCML2 - Scm polycomb group protein like 2 protein-coding chr1-9171 chr1 20474619 20474829 + 5.18 0.000 Intergenic MER20|DNA|hAT-Charlie 11486 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding chr3-10223 chr3 122061942 122062152 + 5.18 0.000 intron (NM_001206925, intron 1 of 5) L1MD2|LINE|L1 6685 NM_001206925 942 Hs.171182 NM_006889 ENSG00000114013 CD86 B7-2|B7.2|B70|CD28LG2|LAB72 CD86 molecule protein-coding chr22-3815 chr22 30728201 30728411 + 5.18 0.000 intron (NM_030758, intron 1 of 13) AluY|SINE|Alu -3251 NR_036171 100422912 NR_036171 ENSG00000264661 MIR3200 mir-3200 microRNA 3200 ncRNA chr10-7863 chr10 47343302 47343512 + 5.18 0.000 Intergenic AluSx1|SINE|Alu -4956 NM_002900 5949 Hs.591928 NM_002900 ENSG00000265203 RBP3 D10S64|D10S65|D10S66|IRBP|RBPI|RP66 retinol binding protein 3 protein-coding chr8-6706 chr8 84701816 84702026 + 5.18 0.000 intron (NM_001354308, intron 3 of 9) intron (NM_001354308, intron 3 of 9) -4006 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr10-3248 chr10 121329242 121329452 + 5.18 0.000 Intergenic Intergenic 201967 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr16-5619 chr16 58548291 58548501 + 5.18 0.000 TTS (NR_002978) TTS (NR_002978) 237 NR_002978 677827 Hs.688592 NR_002978 ENSG00000207493 SNORA46 ACA46 small nucleolar RNA, H/ACA box 46 snoRNA chr16-2766 chr16 8734957 8735167 + 5.18 0.000 intron (NM_001127448, intron 1 of 15) AluSz|SINE|Alu 14349 NM_001127448 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr1-11050 chr1 224106412 224106622 + 5.18 0.000 Intergenic LTR41|LTR|ERVL -7594 NM_001136115 23219 Hs.64691 NM_015176 ENSG00000143756 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding chr17-7194 chr17 81657143 81657353 + 5.18 0.000 promoter-TSS (NM_002602) promoter-TSS (NM_002602) -706 NM_002602 5148 Hs.654482 NM_002602 ENSG00000185527 PDE6G PDEG|RP57 phosphodiesterase 6G protein-coding chr10-7923 chr10 51098914 51099124 + 5.18 0.000 intron (NM_006258, intron 1 of 17) LTR16A2|LTR|ERVL 24532 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr5-8840 chr5 151300056 151300266 + 5.18 0.000 intron (NM_181774, intron 1 of 9) intron (NM_181774, intron 1 of 9) 3605 NM_001145017 285641 Hs.720893 NM_181774 ENSG00000186334 SLC36A3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 member 3 protein-coding chr12-5704 chr12 111737798 111738008 + 5.18 0.000 intron (NM_025247, intron 12 of 20) AluSz6|SINE|Alu -29030 NM_000690 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr5-6875 chr5 124867050 124867260 + 5.18 0.000 Intergenic Intergenic -122043 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr4-5749 chr4 57675333 57675543 + 5.18 0.000 Intergenic Intergenic 249566 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr18-3567 chr18 78794034 78794244 + 5.18 0.000 Intergenic Intergenic -186136 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr1-15385 chr1 150942433 150942643 + 5.18 0.000 intron (NM_001243491, intron 5 of 8) intron (NM_001243491, intron 5 of 8) 16175 NM_012432 9869 Hs.643565 NM_012432 ENSG00000143379 SETDB1 ESET|H3-K9-HMTase4|KG1T|KMT1E|TDRD21 SET domain bifurcated histone lysine methyltransferase 1 protein-coding chr3-5150 chr3 57271919 57272129 + 5.18 0.000 3' UTR (NM_012096, exon 22 of 22) 3' UTR (NM_012096, exon 22 of 22) 2458 NR_135535 105377102 Hs.745243 NR_135535 LOC105377102 - uncharacterized LOC105377102 ncRNA chr19-6595 chr19 28218054 28218264 + 5.18 0.000 Intergenic AluJr|SINE|Alu -388529 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr17-8306 chr17 70596420 70596630 + 5.18 0.000 Intergenic Intergenic 426990 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr4-8291 chr4 142940973 142941183 + 5.18 0.000 Intergenic Intergenic -94543 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr2-13751 chr2 170087107 170087317 + 5.18 0.000 Intergenic MER58A|DNA|hAT-Charlie -90935 NR_045684 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr17-7572 chr17 20095857 20096067 + 5.18 0.000 intron (NM_001033553, intron 1 of 14) intron (NM_001033553, intron 1 of 14) 8940 NM_152904 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr16-5971 chr16 4863927 4864137 + 5.18 0.000 intron (NM_001079514, intron 7 of 17) intron (NM_001079514, intron 7 of 17) 15652 NM_001288656 29855 Hs.440219 NM_016936 ENSG00000118900 UBN1 VT|VT4 ubinuclein 1 protein-coding chr2-10652 chr2 17865757 17865967 + 5.18 0.000 Intergenic AluY|SINE|Alu -11985 NM_001282428 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr3-6749 chr3 140328207 140328417 + 5.18 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 180477 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr1-12442 chr1 14830449 14830659 + 5.18 0.000 intron (NM_201628, intron 1 of 14) MSTA|LTR|ERVL-MaLR -93575 NM_001018000 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr4-5874 chr4 125827796 125828006 + 5.18 0.000 Intergenic Intergenic 320642 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chrX-4546 chrX 68982990 68983200 + 5.18 0.000 Intergenic Intergenic 154098 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr7-8372 chr7 44367311 44367521 + 5.18 0.000 Intergenic L1M2a|LINE|L1 -41785 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr3-11142 chr3 188431390 188431600 + 5.18 0.000 intron (NM_001167672, intron 2 of 9) intron (NM_001167672, intron 2 of 9) 137171 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr8-3447 chr8 90280457 90280667 + 5.18 0.000 intron (NR_051989, intron 2 of 3) AluSz6|SINE|Alu 59074 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr16-5077 chr16 78327698 78327908 + 5.18 0.000 intron (NM_001291997, intron 4 of 7) intron (NM_001291997, intron 4 of 7) 228149 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr12-7785 chr12 96691110 96691320 + 5.18 0.000 exon (NM_001367885, exon 45 of 69) exon (NM_001367885, exon 45 of 69) 201638 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr9-6671 chr9 135524102 135524312 + 5.18 0.000 intron (NM_001252618, intron 4 of 6) intron (NM_001252618, intron 4 of 6) 2767 NM_001252619 3933 Hs.530311 NM_002297 ENSG00000160349 LCN1 PMFA|TLC|TP|VEGP lipocalin 1 protein-coding chr19-6241 chr19 6489968 6490178 + 5.18 0.000 Intergenic LTR67B|LTR|ERVL -8286 NM_001290331 79958 Hs.236449 NM_024898 ENSG00000205744 DENND1C FAM31C DENN domain containing 1C protein-coding chr20-3812 chr20 23553262 23553472 + 5.18 0.000 Intergenic Intergenic 15117 NM_080610 128821 Hs.121554 NM_080610 ENSG00000101435 CST9L CTES7B|bA218C14.1 cystatin 9 like protein-coding chr18-3523 chr18 75316406 75316616 + 5.18 0.000 Intergenic MIRb|SINE|MIR 104982 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr22-3775 chr22 28692682 28692892 + 5.18 0.000 intron (NM_001257387, intron 14 of 15) THE1C|LTR|ERVL-MaLR -12922 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding chr11-8708 chr11 6298673 6298883 + 5.18 0.000 Intergenic Intergenic 21723 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr16-4130 chr16 3664036 3664246 + 5.18 0.000 intron (NM_001272049, intron 12 of 16) intron (NM_001272049, intron 12 of 16) 9437 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr5-6524 chr5 5607666 5607876 + 5.18 0.000 Intergenic L1ME3A|LINE|L1 185094 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr12-8273 chr12 125327297 125327507 + 5.18 0.000 intron (NM_052907, intron 1 of 8) L2a|LINE|L2 786 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr13-4072 chr13 76248014 76248224 + 5.18 0.000 Intergenic L3|LINE|CR1 -312987 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chrX-4129 chrX 27149649 27149859 + 5.18 0.000 Intergenic MER20|DNA|hAT-Charlie 313587 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr1-16485 chr1 229092052 229092262 + 5.18 0.000 Intergenic Intergenic 82644 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr11-10180 chr11 94311312 94311522 + 5.18 0.000 Intergenic AluSx3|SINE|Alu 5780 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr13-4118 chr13 80837632 80837842 + 5.18 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -180654 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA chr7-7984 chr7 15477478 15477688 + 5.18 0.000 intron (NM_001004320, intron 3 of 12) intron (NM_001004320, intron 3 of 12) 84432 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding chr16-5581 chr16 49103056 49103266 + 5.18 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 178677 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding chr13-3577 chr13 26914088 26914298 + 5.18 0.000 Intergenic Intergenic -153407 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr2-9830 chr2 153066874 153067084 + 5.18 0.000 Intergenic L1MEd|LINE|L1 348342 NM_001350068 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr16-5329 chr16 79350654 79350864 + 5.18 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 249978 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr14-4780 chr14 64658416 64658626 + 5.18 0.000 Intergenic LTR12C|LTR|ERV1 -45903 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr5-8963 chr5 160549098 160549308 + 5.18 0.000 Intergenic Intergenic 63851 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr20-3841 chr20 24761680 24761890 + 5.18 0.000 Intergenic Intergenic -187484 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr17-6567 chr17 44997305 44997515 + 5.18 0.000 Intergenic Intergenic -29107 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr14-2291 chr14 58955395 58955605 + 5.18 0.000 intron (NR_110547, intron 4 of 5) intron (NR_110547, intron 4 of 5) 127212 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA KI270861.1-1 KI270861.1 170900 171110 + 5.18 0.000 NA NA NA NA chr13-4385 chr13 108897650 108897860 + 5.18 0.000 intron (NM_015011, intron 14 of 34) intron (NM_015011, intron 14 of 34) 268144 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr1-13587 chr1 8936250 8936460 + 5.18 0.000 Intergenic AluJb|SINE|Alu -9513 NM_001270502 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr4-7304 chr4 54097699 54097909 + 5.18 0.000 Intergenic Intergenic -2359 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr10-7362 chr10 1404026 1404236 + 5.18 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -122499 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr5-7679 chr5 55010098 55010308 + 5.18 0.000 Intergenic L1PA12|LINE|L1 13966 NR_104662 102467081 NR_104662 LOC102467081 - uncharacterized LOC102467081 ncRNA chr2-13075 chr2 110886194 110886404 + 5.18 0.000 intron (NM_001371254, intron 10 of 18) intron (NM_001371254, intron 10 of 18) 153726 NM_001371254 chr9-4551 chr9 85299025 85299235 + 5.18 0.000 Intergenic Intergenic 442899 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr1-7024 chr1 171475423 171475633 + 5.18 0.000 Intergenic LTR16A|LTR|ERVL -10002 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding chr2-11771 chr2 13138900 13139110 + 5.18 0.000 Intergenic Intergenic -131992 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr19-6572 chr19 19649505 19649715 + 5.18 0.000 exon (NM_020410, exon 19 of 26) exon (NM_020410, exon 19 of 26) -5953 NM_016573 51291 Hs.49427 NM_016573 ENSG00000089639 GMIP ARHGAP46 GEM interacting protein protein-coding chr7-8899 chr7 92946096 92946306 + 5.18 0.000 Intergenic Intergenic -109574 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr19-6370 chr19 12503915 12504125 + 5.18 0.000 Intergenic AluJo|SINE|Alu -19204 NM_152601 163051 Hs.631623 NM_152601 ENSG00000242852 ZNF709 - zinc finger protein 709 protein-coding chr4-5614 chr4 2733132 2733342 + 5.18 0.000 TTS (NM_001366318) TTS (NM_001366318) 23099 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr9-6987 chr9 111472460 111472670 + 5.18 0.000 intron (NM_001363756, intron 1 of 48) AluJb|SINE|Alu 10997 NM_001364931 23392 Hs.368255 NM_001080398 ENSG00000136813 ECPAS ECM29|KIAA0368 Ecm29 proteasome adaptor and scaffold protein-coding chr2-10410 chr2 191398255 191398465 + 5.18 0.000 intron (NM_012223, intron 21 of 28) SVA_E|Retroposon|SVA 152956 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr8-6159 chr8 31994232 31994442 + 5.18 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -31399 NR_104158 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr12-8218 chr12 123723945 123724155 + 5.18 0.000 intron (NM_012463, intron 3 of 19) intron (NM_012463, intron 3 of 19) 11697 NM_012463 23545 Hs.25786 NM_012463 ENSG00000185344 ATP6V0A2 A2|ARCL|ARCL2A|ATP6A2|ATP6N1D|J6B7|RTF|STV1|TJ6|TJ6M|TJ6S|VPH1|WSS ATPase H+ transporting V0 subunit a2 protein-coding chr20-3253 chr20 905006 905216 + 5.18 0.000 intron (NM_015985, intron 1 of 8) L2a|LINE|L2 11223 NM_015985 51378 Hs.278973 NM_015985 ENSG00000101280 ANGPT4 ANG3|ANG4 angiopoietin 4 protein-coding chr12-8014 chr12 112745138 112745348 + 5.18 0.000 intron (NM_001347952, intron 1 of 21) L1MC4|LINE|L1 -46295 NM_001347953 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr3-5500 chr3 194497888 194498098 + 5.18 0.000 Intergenic Intergenic 10853 NR_033929 401106 Hs.407087 NR_033929 LINC00884 - long intergenic non-protein coding RNA 884 ncRNA chr2-11595 chr2 2213370 2213580 + 5.18 0.000 intron (NM_015025, intron 2 of 24) L1ME1|LINE|L1 -105757 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr21-1438 chr21 26357709 26357919 + 5.18 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -35821 NR_135516 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chr18-3442 chr18 66005844 66006054 + 5.18 0.000 Intergenic LTR12C|LTR|ERV1 254937 NM_001317214 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr15-4501 chr15 51580394 51580604 + 5.18 0.000 intron (NM_001174116, intron 1 of 42) intron (NM_001174116, intron 1 of 42) 42272 NM_001174116 23312 Hs.511386 NM_015263 ENSG00000104093 DMXL2 DFNA71|PEPNS|RC3 Dmx like 2 protein-coding chr2-13074 chr2 110829310 110829520 + 5.18 0.000 intron (NM_001371254, intron 9 of 18) intron (NM_001371254, intron 9 of 18) 96842 NM_001371254 chr7-7541 chr7 111987214 111987424 + 5.18 0.000 intron (NM_001363540, intron 6 of 52) intron (NM_001363540, intron 6 of 52) 178814 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr7-7668 chr7 151287407 151287617 + 5.18 0.000 Intergenic L1MD1|LINE|L1 -10363 NM_003078 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr4-3330 chr4 1736852 1737062 + 5.18 0.000 intron (NM_006342, intron 8 of 15) intron (NM_006342, intron 8 of 15) 15436 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chr11-9423 chr11 59476519 59476729 + 5.18 0.000 promoter-TSS (NM_001004705) promoter-TSS (NM_001004705) -806 NM_001004705 390197 Hs.553756 NM_001004705 ENSG00000254466 OR4D10 OR11-251|OR4D10P|OST711 olfactory receptor family 4 subfamily D member 10 protein-coding chr15-4755 chr15 69424166 69424376 + 5.18 0.000 intron (NM_138555, intron 7 of 22) intron (NM_138555, intron 7 of 22) -9242 NR_132969 145694 Hs.147229 NR_132969 ENSG00000259426 LOC145694 - uncharacterized LOC145694 ncRNA chr20-1933 chr20 17437434 17437644 + 5.18 0.000 intron (NM_002594, intron 8 of 11) intron (NM_002594, intron 8 of 11) 93840 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr15-4764 chr15 70036858 70037068 + 5.18 0.000 Intergenic Intergenic 42505 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr13-4505 chr13 114290065 114290275 + 5.18 0.000 intron (NR_148488, intron 3 of 5) intron (NR_148488, intron 3 of 5) 7775 NM_001353648 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3A regulator of nonsense mediated mRNA decay protein-coding chr14-4533 chr14 41360617 41360827 + 5.18 0.000 Intergenic Intergenic -246134 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr2-7236 chr2 223976880 223977090 + 5.18 0.000 intron (NM_001136530, intron 8 of 8) THE1D|LTR|ERVL-MaLR 19522 NM_022915 65080 Hs.203559 NM_022915 ENSG00000135900 MRPL44 COXPD16|L44MT|MRP-L44 mitochondrial ribosomal protein L44 protein-coding chr8-6201 chr8 35750771 35750981 + 5.18 0.000 intron (NM_001322818, intron 13 of 16) intron (NM_001322818, intron 13 of 16) -40556 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr16-6384 chr16 53144900 53145110 + 5.18 0.000 intron (NM_001352127, intron 1 of 38) AluJr|SINE|Alu -10921 NM_001308319 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr2-8261 chr2 100385170 100385380 + 5.18 0.000 Intergenic Intergenic 32393 NM_004854 9486 Hs.516370 NM_004854 ENSG00000115526 CHST10 HNK-1ST|HNK1ST carbohydrate sulfotransferase 10 protein-coding chr1-15241 chr1 112206353 112206563 + 5.18 0.000 Intergenic L1MEd|LINE|L1 -189756 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr5-7230 chr5 9490633 9490843 + 5.18 0.000 intron (NM_003966, intron 1 of 22) intron (NM_003966, intron 1 of 22) -20595 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr2-8188 chr2 88118193 88118403 + 5.18 0.000 Intergenic Intergenic 9764 NM_001443 2168 Hs.380135 NM_001443 ENSG00000163586 FABP1 FABPL|L-FABP fatty acid binding protein 1 protein-coding chr20-4307 chr20 51308648 51308858 + 5.18 0.000 Intergenic MIRc|SINE|MIR 144224 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr3-6591 chr3 125116212 125116422 + 5.18 0.000 intron (NM_001195483, intron 7 of 12) CR1_Mam|LINE|CR1 35235 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr16-6117 chr16 17777612 17777822 + 5.18 0.000 Intergenic Intergenic -306757 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr14-4373 chr14 26844860 26845070 + 5.18 0.000 Intergenic Intergenic -22845 NR_110033 101927062 NR_110033 ENSG00000257845 LINC02294 - long intergenic non-protein coding RNA 2294 ncRNA chr1-13561 chr1 7484196 7484406 + 5.18 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -94547 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr11-7119 chr11 124422972 124423182 + 5.18 0.000 TTS (NM_001005196) TTS (NM_001005196) 1794 NM_001005196 283162 Hs.553671 NM_001005196 ENSG00000280090 OR8B4 OR11-315|OR8B4P olfactory receptor family 8 subfamily B member 4 (gene/pseudogene) protein-coding chr2-12595 chr2 70825659 70825869 + 5.18 0.000 Intergenic AluJb|SINE|Alu -5165 NM_001321308 165530 Hs.681239 NM_173535 ENSG00000152672 CLEC4F CLECSF13|KCLR C-type lectin domain family 4 member F protein-coding chr12-5772 chr12 4853085 4853295 + 5.18 0.000 Intergenic Intergenic 44014 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding chr3-5676 chr3 13153386 13153596 + 5.18 0.000 Intergenic Intergenic -80062 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr5-6076 chr5 10163295 10163505 + 5.18 0.000 Intergenic AluJo|SINE|Alu 86488 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr8-6502 chr8 65408224 65408434 + 5.18 0.000 Intergenic AluY|SINE|Alu 154337 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chrX-4665 chrX 81939600 81939810 + 5.18 0.000 Intergenic Intergenic 737603 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chrX-2558 chrX 100929267 100929477 + 5.18 0.000 promoter-TSS (NM_212559) promoter-TSS (NM_212559) -455 NM_212559 402415 Hs.364911 NM_212559 ENSG00000182489 XKRX XKR2|XPLAC|XRG2 XK related X-linked protein-coding chr17-8129 chr17 58198885 58199095 + 5.18 0.000 intron (NM_000502, intron 7 of 12) intron (NM_000502, intron 7 of 12) 6264 NM_000502 8288 Hs.279259 NM_000502 ENSG00000121053 EPX EPO|EPP|EPX-PEN|EPXD eosinophil peroxidase protein-coding chr11-5613 chr11 117589595 117589805 + 5.18 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 207516 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr19-6596 chr19 28224209 28224419 + 5.18 0.000 Intergenic Intergenic -382374 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr3-10136 chr3 114015989 114016199 + 5.18 0.000 intron (NR_148531, intron 6 of 14) intron (NR_148531, intron 6 of 14) 40432 NM_020817 57577 Hs.477159 NM_020817 ENSG00000163617 CCDC191 KIAA1407 coiled-coil domain containing 191 protein-coding chr3-10652 chr3 148866327 148866537 + 5.18 0.000 intron (NM_001870, intron 2 of 10) L2c|LINE|L2 1136 NM_001870 1359 Hs.646 NM_001870 ENSG00000163751 CPA3 MC-CPA carboxypeptidase A3 protein-coding chr14-4534 chr14 41385971 41386181 + 5.18 0.000 Intergenic Intergenic -220780 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-15420 chr1 152460273 152460483 + 5.18 0.000 Intergenic Intergenic -46115 NM_016190 49860 Hs.242057 NM_016190 ENSG00000143536 CRNN C1orf10|DRC1|PDRC1|SEP53 cornulin protein-coding chr5-5618 chr5 153784461 153784671 + 5.18 0.000 intron (NR_047578, intron 12 of 13) intron (NR_047578, intron 12 of 13) 114421 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr2-13812 chr2 175239820 175240030 + 5.18 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -58215 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr18-725 chr18 37539361 37539571 + 5.18 0.000 intron (NM_001353701, intron 1 of 1) (AC)n|Simple_repeat|Simple_repeat 26332 NM_001353752 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr12-6174 chr12 13322462 13322672 + 5.18 0.000 Intergenic Intergenic 54178 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr14-4884 chr14 71952965 71953175 + 5.18 0.000 intron (NM_001370288, intron 1 of 16) intron (NM_001370288, intron 1 of 16) 19543 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr6-3903 chr6 67418662 67418872 + 5.18 0.000 Intergenic L1MC1|LINE|L1 -636584 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr9-7826 chr9 82538805 82539015 + 5.18 0.000 Intergenic Intergenic 524232 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr8-6609 chr8 74065773 74065983 + 5.18 0.000 Intergenic Intergenic 74486 NM_015364 23643 Hs.726603 NM_015364 ENSG00000154589 LY96 ESOP-1|MD-2|MD2|ly-96 lymphocyte antigen 96 protein-coding chr1-16493 chr1 229402912 229403122 + 5.18 0.000 Intergenic MIRb|SINE|MIR 31079 NM_001100 58 Hs.1288 NM_001100 ENSG00000143632 ACTA1 ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3|SHPM actin alpha 1, skeletal muscle protein-coding chr15-3054 chr15 60530789 60530999 + 5.18 0.000 TTS (NR_120339) TTS (NR_120339) 51716 NR_120342 101928784 Hs.655155 NR_120339 ENSG00000245534 RORA-AS1 - RORA antisense RNA 1 ncRNA chr2-12535 chr2 66121317 66121527 + 5.18 0.000 Intergenic Intergenic 236906 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chrX-4832 chrX 102934818 102935028 + 5.18 0.000 intron (NR_146589, intron 10 of 11) intron (NR_146589, intron 10 of 11) -2349 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr20-3265 chr20 3441919 3442129 + 5.18 0.000 Intergenic AluJo|SINE|Alu -28994 NM_001207047 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding chr5-6787 chr5 91311944 91312154 + 5.18 0.000 intron (NR_103549, intron 2 of 2) intron (NR_103549, intron 2 of 2) 2353 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr5-7981 chr5 83746498 83746708 + 5.18 0.000 Intergenic Intergenic -25748 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr14-5170 chr14 91911534 91911744 + 5.18 0.000 intron (NM_006329, intron 4 of 10) MIR3|SINE|MIR 36063 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr5-8842 chr5 151398089 151398299 + 5.18 0.000 Intergenic Intergenic -38852 NM_001308151 206358 Hs.269004 NM_078483 ENSG00000123643 SLC36A1 Dct1|LYAAT1|PAT1|TRAMD3 solute carrier family 36 member 1 protein-coding chr12-7278 chr12 52609243 52609453 + 5.18 0.000 promoter-TSS (NR_126005) promoter-TSS (NR_126005) -503 NR_126005 100127967 Hs.689466 NR_126005 ENSG00000257495 KRT73-AS1 - KRT73 antisense RNA 1 ncRNA chr7-7989 chr7 15709462 15709672 + 5.18 0.000 Intergenic Intergenic 21189 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr2-14147 chr2 203518192 203518402 + 5.18 0.000 intron (NM_001329728, intron 1 of 15) AluSx1|SINE|Alu 17004 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr17-7594 chr17 21357770 21357980 + 5.18 0.000 Intergenic Intergenic -18482 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr3-3379 chr3 48387540 48387750 + 5.18 0.000 intron (NM_207102, intron 10 of 10) AluSz6|SINE|Alu 15426 NM_001159927 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding chr1-13802 chr1 18847168 18847378 + 5.18 0.000 intron (NM_152232, intron 4 of 5) MLT1C|LTR|ERVL-MaLR 12388 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chrX-4835 chrX 103146717 103146927 + 5.18 0.000 Intergenic Intergenic -53679 NM_022052 56000 Hs.60386 NM_022052 ENSG00000147206 NXF3 - nuclear RNA export factor 3 protein-coding chr2-13190 chr2 121116831 121117041 + 5.18 0.000 Intergenic ORSL|DNA|hAT-Tip100 168266 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chrX-5297 chrX 142355846 142356056 + 5.18 0.000 Intergenic Intergenic -150661 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr15-3223 chr15 73488689 73488899 + 5.18 0.000 intron (NM_001348772, intron 2 of 4) MLT1A1-int|LTR|ERVL-MaLR 45630 NM_001348772 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding chr15-4995 chr15 80440648 80440858 + 5.18 0.000 intron (NM_014862, intron 1 of 18) intron (NM_014862, intron 1 of 18) 36371 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr17-7769 chr17 35735286 35735496 + 5.18 0.000 exon (NM_033315, exon 2 of 4) exon (NM_033315, exon 2 of 4) 3752 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr7-8548 chr7 55954898 55955108 + 5.18 0.000 exon (NM_015969, exon 3 of 3) exon (NM_015969, exon 3 of 3) 3126 NM_015969 51373 Hs.44298 NM_015969 ENSG00000239789 MRPS17 HSPC011|MRP-S17|RPMS17|S17mt mitochondrial ribosomal protein S17 protein-coding chr5-5567 chr5 149175636 149175846 + 5.18 0.000 intron (NM_001370418, intron 1 of 18) intron (NM_001370418, intron 1 of 18) 34010 NM_001370418 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr13-4341 chr13 102467729 102467939 + 5.18 0.000 Intergenic Intergenic -65391 NM_001321948 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr15-1728 chr15 35115501 35115711 + 5.18 0.000 Intergenic Intergenic -30198 NM_001355281 388112 Hs.635882 NM_001355281 ENSG00000255192 NANOGP8 NANOGP1|PN8 Nanog homeobox retrogene P8 protein-coding chr12-7503 chr12 67885854 67886064 + 5.18 0.000 Intergenic Intergenic -43276 NR_120456 101927922 Hs.450769 NR_120456 ENSG00000255772 LINC01479 HRAT39 long intergenic non-protein coding RNA 1479 ncRNA chr16-6224 chr16 28555970 28556180 + 5.18 0.000 intron (NM_138414, intron 1 of 9) MIRb|SINE|MIR 2155 NM_138414 112869 Hs.655476 NM_138414 ENSG00000176476 SGF29 CCDC101|STAF36|TDRD29 SAGA complex associated factor 29 protein-coding chr6-6005 chr6 105327047 105327257 + 5.18 0.000 intron (NM_002726, intron 9 of 14) intron (NM_002726, intron 9 of 14) 75930 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr9-8785 chr9 134009475 134009685 + 5.18 0.000 Intergenic AluSq2|SINE|Alu -15896 NR_149319 266655 Hs.654869 NM_001355256 ENSG00000235106 BRD3OS LINC00094|LP2477|NCRNA00094 BRD3 opposite strand protein-coding chr1-8889 chr1 5697632 5697842 + 5.18 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 165004 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr12-7759 chr12 94801419 94801629 + 5.18 0.000 Intergenic Intergenic -32874 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr7-7637 chr7 139449638 139449848 + 5.18 0.000 Intergenic AluY|SINE|Alu -22217 NR_033999 100129148 Hs.744449 NR_033999 LOC100129148 - uncharacterized LOC100129148 ncRNA chr15-5095 chr15 88571288 88571498 + 5.18 0.000 Intergenic Intergenic -24690 NR_026645 55070 Hs.655064 NM_017996 ENSG00000140543 DET1 - DET1 partner of COP1 E3 ubiquitin ligase protein-coding chr6-7515 chr6 65384519 65384729 + 5.18 0.000 intron (NM_198283, intron 6 of 9) intron (NM_198283, intron 6 of 9) 83206 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chrX-5003 chrX 118655942 118656152 + 5.18 0.000 intron (NM_144658, intron 44 of 52) AluJb|SINE|Alu -71559 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr13-4295 chr13 99302178 99302388 + 5.18 0.000 intron (NM_004951, intron 1 of 1) intron (NM_004951, intron 1 of 1) 5116 NM_004951 1880 Hs.784 NM_004951 ENSG00000169508 GPR183 EBI2|hEBI2 G protein-coupled receptor 183 protein-coding chr9-7802 chr9 80423951 80424161 + 5.18 0.000 Intergenic Intergenic 449033 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr6-5720 chr6 142080278 142080488 + 5.18 0.000 intron (NM_001324308, intron 1 of 2) AluJb|SINE|Alu 8416 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr2-14672 chr2 236804194 236804404 + 5.18 0.000 Intergenic L1M5|LINE|L1 234474 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chrX-2452 chrX 81424081 81424291 + 5.18 0.000 Intergenic AluJo|SINE|Alu 222084 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr17-5739 chr17 58435843 58436053 + 5.18 0.000 intron (NM_001080439, intron 5 of 5) intron (NM_001080439, intron 5 of 5) -18366 NM_017763 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr2-13969 chr2 188948063 188948273 + 5.18 0.000 Intergenic Zaphod|DNA|hAT-Tip100 -26205 NM_000090 1281 Hs.443625 NM_000090 ENSG00000168542 COL3A1 EDS4A|EDSVASC|PMGEDSV collagen type III alpha 1 chain protein-coding chr18-3335 chr18 56948983 56949193 + 5.18 0.000 intron (NM_015285, intron 25 of 27) intron (NM_015285, intron 25 of 27) 123031 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr5-2597 chr5 109968865 109969075 + 5.18 0.000 Intergenic AluSx3|SINE|Alu 85788 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr7-8764 chr7 78873232 78873442 + 5.18 0.000 intron (NM_001301128, intron 2 of 20) MER1A|DNA|hAT-Charlie -135651 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr14-4504 chr14 38088911 38089121 + 5.18 0.000 Intergenic Intergenic -118888 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr3-11048 chr3 183194865 183195075 + 5.18 0.000 intron (NM_015078, intron 26 of 29) AluJb|SINE|Alu -32236 NM_014398 27074 Hs.518448 NM_014398 ENSG00000078081 LAMP3 CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403 lysosomal associated membrane protein 3 protein-coding chr9-8266 chr9 112342089 112342299 + 5.18 0.000 Intergenic MLT2B3|LTR|ERVL -8530 NM_001163790 9991 Hs.269988 NM_005156 ENSG00000119314 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding chr11-8889 chr11 15111362 15111572 + 5.18 0.000 promoter-TSS (NM_001031853) promoter-TSS (NM_001031853) -957 NM_001031853 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr21-1568 chr21 13987355 13987565 + 5.18 0.000 Intergenic (TGCCC)n|Simple_repeat|Simple_repeat -7016 NR_027270 391267 Hs.364456 NM_153750 ENSG00000215559 ANKRD20A11P C21orf81 ankyrin repeat domain 20 family member A11, pseudogene pseudo chr12-7715 chr12 91402919 91403129 + 5.18 0.000 Intergenic Intergenic -220207 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr18-3488 chr18 72448314 72448524 + 5.18 0.000 Intergenic THE1C|LTR|ERVL-MaLR 95923 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr5-3861 chr5 134881818 134882028 + 5.18 0.000 intron (NM_024715, intron 1 of 4) SVA_D|Retroposon|SVA 8153 NM_001350735 79770 Hs.741304 NM_024715 ENSG00000113621 TXNDC15 BUG|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding chr3-11026 chr3 181883192 181883402 + 5.18 0.000 Intergenic Tigger9b|DNA|TcMar-Tigger -69067 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr5-7062 chr5 171445918 171446128 + 5.18 0.000 intron (NM_003862, intron 3 of 4) (TC)n|Simple_repeat|Simple_repeat 26376 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr3-6730 chr3 137974290 137974500 + 5.18 0.000 Intergenic L2c|LINE|L2 -24421 NM_001002026 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr8-7501 chr8 143188059 143188269 + 5.18 0.000 Intergenic Intergenic -25054 NM_178172 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr11-9630 chr11 66250845 66251055 + 5.18 0.000 Intergenic L2b|LINE|L2 -6344 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chrX-5277 chrX 140123915 140124125 + 5.18 0.000 Intergenic L1MA2|LINE|L1 32353 NM_001271560 389895 Hs.127679 NM_001271560 LOC389895 - chromosome 16 open reading frame 72-like protein-coding chr16-6113 chr16 14318609 14318819 + 5.18 0.000 intron (NR_132983, intron 1 of 1) AluJo|SINE|Alu 9429 NR_029854 100126355 NR_029854 ENSG00000199130 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a|mir-365a microRNA 365a ncRNA chr1-13984 chr1 25424160 25424370 + 5.18 0.000 Intergenic MER47A|DNA|TcMar-Tigger -3351 NM_138617 6006 Hs.449968 NM_020485 ENSG00000188672 RHCE CD240CE|RH|RH30A|RHC|RHCe(152N)|RHE|RHIXB|RHNA|RHPI|Rh4|RhIVb(J)|RhVI|RhVIII Rh blood group CcEe antigens protein-coding chr4-8541 chr4 164913129 164913339 + 5.18 0.000 Intergenic Intergenic 36056 NM_001297550 100506013 Hs.105196 NM_001297550 ENSG00000248329 APELA ELA|Ende|tdl apelin receptor early endogenous ligand protein-coding chr1-12520 chr1 23201054 23201264 + 5.18 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -6430 NM_000864 3352 Hs.121482 NM_000864 ENSG00000179546 HTR1D 5-HT1D|HT1DA|HTR1DA|HTRL|RDC4 5-hydroxytryptamine receptor 1D protein-coding chr7-6150 chr7 124792663 124792873 + 5.18 0.000 Intergenic L2c|LINE|L2 -1958 NM_001024603 154872 Hs.444163 NM_001024603 ENSG00000275356 C7orf77 - chromosome 7 open reading frame 77 protein-coding chr8-4383 chr8 102692824 102693034 + 5.18 0.000 Intergenic Intergenic 36681 NR_160673 101927245 NR_160672 LOC101927245 - uncharacterized LOC101927245 ncRNA chr11-8396 chr11 94706177 94706387 + 5.18 0.000 intron (NR_135096, intron 1 of 6) intron (NR_135096, intron 1 of 6) 34073 NR_135096 105369438 Hs.568921 NR_135093 ENSG00000255929 LOC105369438 - uncharacterized LOC105369438 ncRNA chr11-10492 chr11 118427724 118427934 + 5.18 0.000 Intergenic L2|LINE|L2 -8661 NM_001197104 4297 Hs.258855 NM_005933 ENSG00000118058 KMT2A ALL-1|CXXC7|HRX|HTRX1|MLL|MLL1|MLL1A|TRX1|WDSTS lysine methyltransferase 2A protein-coding chr3-9718 chr3 66826640 66826850 + 5.18 0.000 Intergenic THE1B|LTR|ERVL-MaLR -88409 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr5-7687 chr5 55729867 55730077 + 5.18 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -8045 NM_001142549 54514 Hs.223581 NM_019039 ENSG00000152670 DDX4 VASA DEAD-box helicase 4 protein-coding chr8-6622 chr8 76671439 76671649 + 5.18 0.000 intron (NR_024360, intron 2 of 3) intron (NR_024360, intron 2 of 3) -9703 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr7-7690 chr7 155863255 155863465 + 5.18 0.000 Intergenic Intergenic -50897 NM_000193 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chrX-4746 chrX 93732437 93732647 + 5.18 0.000 Intergenic Intergenic 58336 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr16-6346 chr16 50359843 50360053 + 5.18 0.000 intron (NM_013263, intron 2 of 16) intron (NM_013263, intron 2 of 16) 9040 NM_013263 29117 Hs.437894 NM_013263 ENSG00000166164 BRD7 BP75|CELTIX1|NAG4 bromodomain containing 7 protein-coding chr22-3716 chr22 25231511 25231721 + 5.18 0.000 exon (NM_000496, exon 6 of 6) exon (NM_000496, exon 6 of 6) 11977 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding chr17-7659 chr17 30073432 30073642 + 5.18 0.000 intron (NR_026738, intron 15 of 15) L1ME2z|LINE|L1 -43270 NM_001261467 84081 Hs.462663 NM_032141 ENSG00000126653 NSRP1 CCDC55|HSPC095|NSrp70 nuclear speckle splicing regulatory protein 1 protein-coding chr21-1341 chr21 31636382 31636592 + 5.18 0.000 Intergenic L1M4|LINE|L1 -23135 NM_000454 6647 Hs.443914 NM_000454 ENSG00000142168 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1 protein-coding chr3-6854 chr3 149895093 149895303 + 5.18 0.000 intron (NM_183383, intron 3 of 8) MIRb|SINE|MIR 75697 NM_053024 5217 Hs.91747 NM_002628 ENSG00000070087 PFN2 D3S1319E|PFL profilin 2 protein-coding chr10-6447 chr10 28352366 28352576 + 5.18 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -49407 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr2-6502 chr2 184475376 184475586 + 5.18 0.000 Intergenic LTR16E1|LTR|ERVL 96506 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr11-9123 chr11 33226499 33226709 + 5.18 0.000 Intergenic Intergenic -30068 NM_001278163 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr8-7153 chr8 122522962 122523172 + 5.18 0.000 intron (NR_131202, intron 2 of 3) intron (NR_131202, intron 2 of 3) 45577 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr4-8767 chr4 187763370 187763580 + 5.18 0.000 Intergenic ERVL-B4-int|LTR|ERVL -90834 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LINC02492 - long intergenic non-protein coding RNA 2492 ncRNA chr13-3482 chr13 19049544 19049754 + 5.18 0.000 Intergenic Intergenic 41390 NR_026852 348021 Hs.314114 NR_026852 ENSG00000232685 LINC00442 - long intergenic non-protein coding RNA 442 ncRNA chr17-5789 chr17 63249516 63249726 + 5.18 0.000 intron (NM_025185, intron 7 of 25) intron (NM_025185, intron 7 of 25) 190646 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr7-7415 chr7 74642922 74643132 + 5.18 0.000 Intergenic AluSg|SINE|Alu -14638 NM_001280800 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr2-8459 chr2 122221968 122222178 + 5.18 0.000 Intergenic MIR|SINE|MIR 466422 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr1-14223 chr1 35865115 35865325 + 5.18 0.000 Intergenic AluSz|SINE|Alu -4588 NM_001317123 26523 Hs.22867 NM_012199 ENSG00000092847 AGO1 EIF2C|EIF2C1|GERP95|Q99|hAgo1 argonaute RISC component 1 protein-coding chr11-5590 chr11 110760120 110760330 + 5.18 0.000 Intergenic Intergenic -47036 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr7-7672 chr7 151781375 151781585 + 5.18 0.000 intron (NM_016203, intron 2 of 15) intron (NM_016203, intron 2 of 15) -24858 NM_001354885 644090 Hs.647065 NM_001354885 LOC644090 - uncharacterized LOC644090 protein-coding chr6-4871 chr6 89118420 89118630 + 5.18 0.000 promoter-TSS (NM_080743) promoter-TSS (NM_080743) -454 NM_080743 135295 Hs.254414 NM_080743 ENSG00000154548 SRSF12 SFRS13B|SFRS19|SRrp35 serine and arginine rich splicing factor 12 protein-coding chr4-7648 chr4 84482684 84482894 + 5.18 0.000 Intergenic CpG 15445 NM_006168 4825 Hs.546270 NM_006168 ENSG00000163623 NKX6-1 NKX6.1|NKX6A NK6 homeobox 1 protein-coding chr19-3417 chr19 17686808 17687018 + 5.18 0.000 intron (NM_001080421, intron 1 of 41) intron (NM_001080421, intron 1 of 41) 1286 NM_001080421 23025 Hs.164502 NM_001080421 ENSG00000130477 UNC13A Munc13-1 unc-13 homolog A protein-coding chr19-5227 chr19 38432075 38432285 + 5.18 0.000 Intergenic AluSz|SINE|Alu -1511 NM_001042723 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr1-16257 chr1 211688182 211688392 + 5.18 0.000 TTS (NR_148994) TTS (NR_148994) 12525 NR_148994 91548 Hs.367839 NR_148994 LOC91548 - uncharacterized LOC91548 ncRNA chr17-6880 chr17 29892770 29892980 + 5.18 0.000 intron (NM_001282129, intron 1 of 15) L2|LINE|L2 -37028 NM_001145053 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr17-8332 chr17 73170225 73170435 + 5.18 0.000 exon (NM_001050, exon 2 of 2) exon (NM_001050, exon 2 of 2) 5320 NM_001050 6752 Hs.514451 NM_001050 ENSG00000180616 SSTR2 - somatostatin receptor 2 protein-coding chr19-3689 chr19 18056199 18056409 + 5.18 0.000 Intergenic L2b|LINE|L2 30630 NM_153701 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr8-5331 chr8 4330559 4330769 + 5.18 0.000 intron (NM_033225, intron 3 of 69) intron (NM_033225, intron 3 of 69) 664250 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr12-7228 chr12 50857411 50857621 + 5.18 0.000 intron (NM_182559, intron 2 of 4) intron (NM_182559, intron 2 of 4) 14590 NM_182559 283471 Hs.125571 NM_182559 ENSG00000186452 TMPRSS12 CT151 transmembrane serine protease 12 protein-coding chr5-8488 chr5 133127310 133127520 + 5.07 0.000 Intergenic MamTip3|DNA|hAT-Tip100 75402 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr6-7594 chr6 75779711 75779921 + 5.07 0.000 intron (NM_001368139, intron 2 of 9) intron (NM_001368139, intron 2 of 9) 30577 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr6-6058 chr6 134950333 134950543 + 5.07 0.000 promoter-TSS (NM_022568) promoter-TSS (NM_022568) -337 NM_001193480 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding chr15-5197 chr15 94186392 94186602 + 5.07 0.000 Intergenic Charlie3|DNA|hAT-Charlie -78559 NR_120320 101927112 Hs.134687 NR_120320 ENSG00000259724 LINC01581 - long intergenic non-protein coding RNA 1581 ncRNA chr12-6093 chr12 123455911 123456121 + 5.07 0.000 Intergenic AluSz|SINE|Alu -2123 NM_022717 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chr12-3841 chr12 95823973 95824183 + 5.07 0.000 TTS (NR_135016) TTS (NR_135016) 20981 NR_135016 105369920 Hs.145556 NR_135016 ENSG00000258292 LINC02410 - long intergenic non-protein coding RNA 2410 ncRNA chr6-7359 chr6 47864996 47865206 + 5.07 0.000 Intergenic Intergenic 78033 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr7-8778 chr7 80594422 80594632 + 5.07 0.000 Intergenic AluJo|SINE|Alu -7680 NM_001371075 chr12-5770 chr12 4291106 4291316 + 5.07 0.000 intron (NM_001759, intron 4 of 4) (TG)n|Simple_repeat|Simple_repeat -15027 NR_125790 103752584 Hs.577711 NR_125790 ENSG00000255920 CCND2-AS1 CCND2-AS2 CCND2 antisense RNA 1 ncRNA chr1-12695 chr1 51564327 51564537 + 5.07 0.000 intron (NR_161259, intron 7 of 8) intron (NR_161259, intron 7 of 8) 19299 NR_161259 441884 NR_161259 CALR4P - calreticulin 4, pseudogene pseudo chr10-8246 chr10 74381202 74381412 + 5.07 0.000 intron (NM_001369124, intron 4 of 9) intron (NM_001369124, intron 4 of 9) 148017 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr17-6513 chr17 30798492 30798702 + 5.07 0.000 intron (NR_073118, intron 1 of 6) AluSx|SINE|Alu 26095 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr1-6326 chr1 3235968 3236178 + 5.07 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 108098 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr1-12841 chr1 94082016 94082226 + 5.07 0.000 intron (NM_000350, intron 7 of 49) intron (NM_000350, intron 7 of 49) 39027 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr5-6403 chr5 147986488 147986698 + 5.07 0.000 Intergenic MIR3|SINE|MIR -77379 NM_006846 11005 Hs.331555 NM_006846 ENSG00000133710 SPINK5 LEKTI|LETKI|NETS|NS|VAKTI serine peptidase inhibitor, Kazal type 5 protein-coding chr1-6753 chr1 68342863 68343073 + 5.07 0.000 Intergenic Intergenic 106986 NM_000329 6121 Hs.2133 NM_000329 ENSG00000116745 RPE65 BCO3|LCA2|RP20|mRPE65|p63|rd12|sRPE65 retinoid isomerohydrolase RPE65 protein-coding chr21-1362 chr21 38206174 38206384 + 5.07 0.000 non-coding (NR_027695, exon 1 of 3) non-coding (NR_027695, exon 1 of 3) 123 NR_027695 259234 Hs.147695 NM_148676 ENSG00000233316 DSCR10 - Down syndrome critical region 10 ncRNA chr5-8121 chr5 98784632 98784842 + 5.07 0.000 intron (NM_001366510, intron 4 of 4) intron (NM_001366510, intron 4 of 4) 11074 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr5-6814 chr5 102857070 102857280 + 5.07 0.000 intron (NM_001364582, intron 1 of 24) intron (NM_001364582, intron 1 of 24) -8648 NM_001177306 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr8-7144 chr8 121642267 121642477 + 5.07 0.000 promoter-TSS (NM_005328) promoter-TSS (NM_005328) -932 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr7-9228 chr7 119475639 119475849 + 5.07 0.000 Intergenic Intergenic 431631 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr16-5280 chr16 58045251 58045461 + 5.07 0.000 exon (NM_002428, exon 10 of 10) exon (NM_002428, exon 10 of 10) 19602 NM_002428 4324 Hs.80343 NM_002428 ENSG00000102996 MMP15 MMP-15|MT2-MMP|MT2MMP|MTMMP2|SMCP-2 matrix metallopeptidase 15 protein-coding chr15-3067 chr15 61978976 61979186 + 5.07 0.000 intron (NM_001018088, intron 22 of 81) intron (NM_001018088, intron 22 of 81) 81366 NM_017684 54832 Hs.511668 NM_017684 ENSG00000129003 VPS13C PARK23 vacuolar protein sorting 13 homolog C protein-coding chr5-6242 chr5 88851103 88851313 + 5.07 0.000 intron (NM_001131005, intron 2 of 10) AluSc|SINE|Alu -24020 NM_001364342 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr6-7291 chr6 43654125 43654335 + 5.07 0.000 intron (NM_001193341, intron 2 of 5) intron (NM_001193341, intron 2 of 5) 9194 NM_152732 221421 Hs.534585 NM_152732 ENSG00000172426 RSPH9 C6orf206|CILD12|MRPS18AL1 radial spoke head 9 homolog protein-coding chr17-6444 chr17 9289307 9289517 + 5.07 0.000 intron (NM_004853, intron 7 of 7) HAL1|LINE|L1 -110294 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr20-3100 chr20 25481410 25481620 + 5.07 0.000 intron (NM_025176, intron 14 of 23) intron (NM_025176, intron 14 of 23) 73832 NR_134574 9837 Hs.658464 NM_021067 ENSG00000101003 GINS1 IMD55|PSF1 GINS complex subunit 1 protein-coding chr1-11485 chr1 110210055 110210265 + 5.07 0.000 promoter-TSS (NR_046546) promoter-TSS (NR_046546) -154 NM_001039574 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr1-14719 chr1 64948220 64948430 + 5.07 0.000 intron (NM_001321852, intron 1 of 24) intron (NM_001321852, intron 1 of 24) 18224 NM_002227 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr5-7613 chr5 44664990 44665200 + 5.07 0.000 Intergenic MER52A|LTR|ERV1 143698 NR_109862 100506674 Hs.575213 NR_109862 MRPS30-DT BRCAT54 MRPS30 divergent transcript ncRNA chr4-7451 chr4 69139842 69140052 + 5.07 0.000 Intergenic AluSx1|SINE|Alu -42153 NR_136191 105377267 Hs.654304 NR_136191 ENSG00000250696 LOC105377267 - uncharacterized LOC105377267 ncRNA chr7-9439 chr7 134282756 134282966 + 5.07 0.000 Intergenic Intergenic 34069 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr5-6329 chr5 133579916 133580126 + 5.07 0.000 intron (NM_015082, intron 2 of 15) intron (NM_015082, intron 2 of 15) 32520 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr2-10100 chr2 55237592 55237802 + 5.07 0.000 intron (NM_001005369, intron 15 of 16) AluSx1|SINE|Alu 3533 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr20-3996 chr20 36057032 36057242 + 5.07 0.000 Intergenic Intergenic -6177 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr10-7272 chr10 128547522 128547732 + 5.07 0.000 Intergenic Intergenic 261677 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr10-5229 chr10 64120266 64120476 + 5.07 0.000 Intergenic L1PA3|LINE|L1 -598481 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr17-7732 chr17 33581557 33581767 + 5.07 0.000 intron (NM_001094, intron 1 of 9) MER51C|LTR|ERV1 -47902 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr12-6313 chr12 52775031 52775241 + 5.07 0.000 intron (NM_015848, intron 2 of 8) intron (NM_015848, intron 2 of 8) 2209 NM_015848 51350 Hs.654392 NM_015848 ENSG00000185069 KRT76 HUMCYT2A|KRT2B|KRT2P keratin 76 protein-coding chr7-6474 chr7 3949201 3949411 + 5.07 0.000 intron (NM_152744, intron 5 of 44) intron (NM_152744, intron 5 of 44) -180379 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr21-964 chr21 45051016 45051226 + 5.07 0.000 Intergenic L1ME4a|LINE|L1 22090 NR_027292 728039 Hs.309203 NM_032653 ENSG00000235374 SSR4P1 C21orf122|PRED57|PRED90 signal sequence receptor subunit 4 pseudogene 1 pseudo chrX-3508 chrX 42434206 42434416 + 5.07 0.000 Intergenic Intergenic 343852 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr15-3983 chr15 49045702 49045912 + 5.07 0.000 intron (NM_001193489, intron 1 of 17) intron (NM_001193489, intron 1 of 17) 639 NM_001193489 9728 Hs.9997 NM_014701 ENSG00000138593 SECISBP2L SBP2L|SLAN SECIS binding protein 2 like protein-coding chr17-7961 chr17 47849016 47849226 + 5.07 0.000 intron (NM_199262, intron 1 of 1) intron (NM_199262, intron 1 of 1) 2042 NM_001258248 80320 Hs.253603 NM_199262 ENSG00000189120 SP6 EPFN|EPIPROFIN|KLF14 Sp6 transcription factor protein-coding chr4-8036 chr4 119230971 119231181 + 5.07 0.000 intron (NM_001371399, intron 2 of 16) MER54A|LTR|ERVL 18363 NM_001371396 chr1-16634 chr1 239893193 239893403 + 5.07 0.000 intron (NM_001347716, intron 7 of 7) intron (NM_001347716, intron 7 of 7) 6574 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr18-2622 chr18 34083343 34083553 + 5.07 0.000 intron (NM_001353233, intron 5 of 11) intron (NM_001353233, intron 5 of 11) -34836 NM_001198549 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr14-3504 chr14 103062893 103063103 + 5.07 0.000 Intergenic L1MEc|LINE|L1 -5449 NM_006035 9578 Hs.654634 NM_006035 ENSG00000198752 CDC42BPB MRCKB CDC42 binding protein kinase beta protein-coding chr9-6528 chr9 111622022 111622232 + 5.07 0.000 Intergenic Intergenic -8574 NR_034087 652972 Hs.551134 NM_001037807 ENSG00000204173 LRRC37A5P C9orf29 leucine rich repeat containing 37 member A5, pseudogene pseudo chr8-3343 chr8 39989783 39989993 + 5.07 0.000 intron (NM_194294, intron 8 of 10) intron (NM_194294, intron 8 of 10) 54933 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr9-7424 chr9 22446548 22446758 + 5.07 0.000 promoter-TSS (NM_022160) promoter-TSS (NM_022160) -171 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr11-4214 chr11 63662985 63663195 + 5.07 0.000 intron (NM_001290048, intron 1 of 12) intron (NM_001290048, intron 1 of 12) 8286 NM_015459 25923 Hs.356719 NM_015459 ENSG00000184743 ATL3 HSN1F atlastin GTPase 3 protein-coding chr7-8721 chr7 75814682 75814892 + 5.07 0.000 promoter-TSS (NM_002991) promoter-TSS (NM_002991) -981 NM_002991 6369 Hs.247838 NM_002991 ENSG00000106178 CCL24 Ckb-6|MPIF-2|MPIF2|SCYA24 C-C motif chemokine ligand 24 protein-coding chr12-6391 chr12 71143509 71143719 + 5.07 0.000 intron (NM_001369760, intron 2 of 7) intron (NM_001369760, intron 2 of 7) 14195 NM_001369760 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr15-4904 chr15 77088489 77088699 + 5.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR -17485 NM_001168412 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chrX-3357 chrX 140356051 140356261 + 5.07 0.000 Intergenic Intergenic 148904 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr2-11865 chr2 22186434 22186644 + 5.07 0.000 Intergenic LTR12C|LTR|ERV1 -349940 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr9-7944 chr9 90901343 90901553 + 5.07 0.000 Intergenic LTR13_|LTR|ERVK 74028 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr11-10199 chr11 95991394 95991604 + 5.07 0.000 intron (NM_032427, intron 3 of 4) intron (NM_032427, intron 3 of 4) -67292 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr10-4667 chr10 127441594 127441804 + 5.07 0.000 intron (NM_001290223, intron 49 of 51) intron (NM_001290223, intron 49 of 51) -107650 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr2-12485 chr2 62018774 62018984 + 5.07 0.000 intron (NM_001321781, intron 2 of 2) MLT1A1|LTR|ERVL-MaLR 113237 NM_152516 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr13-3385 chr13 85901247 85901457 + 5.07 0.000 Intergenic Charlie2b|DNA|hAT-Charlie -101933 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr4-6254 chr4 71899181 71899391 + 5.07 0.000 Intergenic MER61B|LTR|ERV1 -93766 NM_001204306 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr2-4575 chr2 85451106 85451316 + 5.07 0.000 Intergenic AluJb|SINE|Alu 32280 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr11-9919 chr11 75533275 75533485 + 5.07 0.000 Intergenic Charlie1a|DNA|hAT-Charlie -7439 NM_030792 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr6-6602 chr6 146315363 146315573 + 5.07 0.000 intron (NM_001278065, intron 4 of 9) intron (NM_001278065, intron 4 of 9) -228365 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr22-3252 chr22 44282678 44282888 + 5.07 0.000 intron (NM_001099294, intron 4 of 4) intron (NM_001099294, intron 4 of 4) 30168 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr14-4854 chr14 69861060 69861270 + 5.07 0.000 Intergenic MER53|DNA|hAT -18251 NM_022137 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding chr15-2967 chr15 50418064 50418274 + 5.07 0.000 Intergenic Intergenic -6236 NM_001283049 9101 Hs.443731 NM_005154 ENSG00000138592 USP8 HumORF8|PITA4|SPG59|UBPY ubiquitin specific peptidase 8 protein-coding chr12-6826 chr12 13267768 13267978 + 5.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR 71147 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr7-9234 chr7 120535290 120535500 + 5.07 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 262220 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr9-7536 chr9 34598853 34599063 + 5.07 0.000 Intergenic Intergenic -8818 NM_001207011 1271 Hs.129966 NM_001842 ENSG00000122756 CNTFR - ciliary neurotrophic factor receptor protein-coding chr8-6144 chr8 30445599 30445809 + 5.07 0.000 intron (NM_001008710, intron 1 of 8) AluJb|SINE|Alu -60303 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr2-12932 chr2 101805208 101805418 + 5.07 0.000 intron (NM_145686, intron 3 of 30) L1ME3A|LINE|L1 107606 NM_004834 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr2-13275 chr2 127785294 127785504 + 5.07 0.000 intron (NM_001006622, intron 1 of 5) L1MC1|LINE|L1 25772 NM_001006623 55339 Hs.554831 NM_018383 ENSG00000136709 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding chr4-6479 chr4 150671083 150671293 + 5.07 0.000 intron (NM_001367550, intron 37 of 56) L1MC4a|LINE|L1 89037 NM_006439 10586 Hs.584852 NM_006439 ENSG00000181541 MAB21L2 MCOPS14|MCSKS14 mab-21 like 2 protein-coding chr9-5889 chr9 131930269 131930479 + 5.07 0.000 intron (NM_004269, intron 4 of 7) L1MA2|LINE|L1 149493 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr4-5705 chr4 31962531 31962741 + 5.07 0.000 Intergenic Intergenic -34743 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA chr8-6121 chr8 28750615 28750825 + 5.07 0.000 non-coding (NR_073468, exon 5 of 5) non-coding (NR_073468, exon 5 of 5) 49219 NR_073469 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr12-5098 chr12 95334475 95334685 + 5.07 0.000 Intergenic Intergenic 24657 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr11-7874 chr11 122211307 122211517 + 5.07 0.000 intron (NR_137180, intron 2 of 4) AluSx|SINE|Alu -8303 NR_137182 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr16-6292 chr16 35314191 35314401 + 5.07 0.000 Intergenic Intergenic -49120 NR_027080 283914 Hs.385772 NR_027079 ENSG00000259841 LINC01566 - long intergenic non-protein coding RNA 1566 ncRNA chr2-14662 chr2 236106706 236106916 + 5.07 0.000 intron (NM_001037131, intron 16 of 17) intron (NM_001037131, intron 16 of 17) 61575 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr3-10156 chr3 115550644 115550854 + 5.07 0.000 Intergenic Intergenic -72761 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr11-10052 chr11 84013722 84013932 + 5.07 0.000 intron (NM_001142699, intron 11 of 27) AluSg|SINE|Alu 259453 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr15-4204 chr15 25733304 25733514 + 5.07 0.000 intron (NM_024490, intron 3 of 20) intron (NM_024490, intron 3 of 20) 115416 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr3-5786 chr3 25479005 25479215 + 5.07 0.000 intron (NR_110892, intron 2 of 6) intron (NR_110892, intron 2 of 6) 20800 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr6-2445 chr6 3500292 3500502 + 5.07 0.000 Intergenic MER30|DNA|hAT-Charlie -43838 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr7-7278 chr7 34039092 34039302 + 5.07 0.000 intron (NM_133468, intron 7 of 15) L2b|LINE|L2 133658 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr1-10621 chr1 179232019 179232229 + 5.07 0.000 Intergenic Intergenic -2440 NM_001136001 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr5-8130 chr5 99128052 99128262 + 5.07 0.000 Intergenic AluSx1|SINE|Alu -198443 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr2-13397 chr2 140023419 140023629 + 5.07 0.000 Intergenic L3|LINE|CR1 563161 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr3-7749 chr3 61469006 61469216 + 5.07 0.000 Intergenic L1MC1|LINE|L1 -92460 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr6-6061 chr6 136131286 136131496 + 5.07 0.000 intron (NM_018945, intron 3 of 12) intron (NM_018945, intron 3 of 12) -58564 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr3-9842 chr3 78362584 78362794 + 5.07 0.000 Intergenic ERVL-B4-int|LTR|ERVL -313726 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr2-9317 chr2 224625782 224625992 + 5.07 0.000 Intergenic AluSq2|SINE|Alu -40490 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr3-7494 chr3 155101222 155101432 + 5.07 0.000 intron (NM_000902, intron 3 of 22) intron (NM_000902, intron 3 of 22) 21316 NM_007289 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr11-5334 chr11 61656443 61656653 + 5.07 0.000 Intergenic Intergenic -23843 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr18-3047 chr18 28365381 28365591 + 5.07 0.000 Intergenic Intergenic -188356 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr19-6311 chr19 9901393 9901603 + 5.07 0.000 intron (NM_058164, intron 1 of 5) intron (NM_058164, intron 1 of 5) 12303 NM_001304347 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr13-4171 chr13 88272358 88272568 + 5.07 0.000 Intergenic L2|LINE|L2 129596 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr9-6827 chr9 38008216 38008426 + 5.07 0.000 intron (NM_003028, intron 2 of 5) intron (NM_003028, intron 2 of 5) 60906 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr8-4809 chr8 13854666 13854876 + 5.07 0.000 Intergenic Intergenic 225081 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr6-5537 chr6 168078396 168078606 + 5.07 0.000 intron (NR_110312, intron 2 of 15) intron (NR_110312, intron 2 of 15) 711 NM_024919 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr10-9119 chr10 127137487 127137697 + 5.07 0.000 3' UTR (NM_001039762, exon 6 of 6) 3' UTR (NM_001039762, exon 6 of 6) 58999 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr17-6802 chr17 7137884 7138094 + 5.07 0.000 Intergenic AluSx1|SINE|Alu -23178 NM_001201352 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chr17-5484 chr17 41579594 41579804 + 5.07 0.000 Intergenic Intergenic 7196 NM_000526 3861 Hs.654380 NM_000526 ENSG00000186847 KRT14 CK14|EBS3|EBS4|K14|NFJ keratin 14 protein-coding chrX-3261 chrX 84377794 84378004 + 5.07 0.000 intron (NM_001177478, intron 4 of 9) L1MA1|LINE|L1 124554 NM_001177479 139324 Hs.559546 NM_144657 ENSG00000165259 HDX CXorf43|D030011N01Rik highly divergent homeobox protein-coding chr7-3377 chr7 107682008 107682218 + 5.07 0.000 intron (NM_000441, intron 6 of 20) AluJr|SINE|Alu -20315 NR_028137 286002 Hs.512611 NR_028137 SLC26A4-AS1 - SLC26A4 antisense RNA 1 ncRNA chr3-10578 chr3 141893610 141893820 + 5.07 0.000 intron (NM_001679, intron 1 of 6) L1ME1|LINE|L1 17072 NM_001679 483 Hs.477789 NM_001679 ENSG00000069849 ATP1B3 ATPB-3|CD298 ATPase Na+/K+ transporting subunit beta 3 protein-coding chr16-6852 chr16 82677785 82677995 + 5.07 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) -11041 NR_107025 102465863 NR_107025 ENSG00000277387 MIR8058 hsa-mir-8058 microRNA 8058 ncRNA chr11-10309 chr11 108147054 108147264 + 5.07 0.000 intron (NM_000019, intron 11 of 11) intron (NM_000019, intron 11 of 11) 25592 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr20-4508 chr20 63484832 63485042 + 5.07 0.000 Intergenic Intergenic -12282 NM_172107 3785 Hs.161851 NM_004518 ENSG00000075043 KCNQ2 BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2 potassium voltage-gated channel subfamily Q member 2 protein-coding chr8-6169 chr8 32520958 32521168 + 5.07 0.000 intron (NM_013962, intron 1 of 4) MER44B|DNA|TcMar-Tigger -27147 NM_013958 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr16-6293 chr16 35395673 35395883 + 5.07 0.000 Intergenic AluY|SINE|Alu 32247 NR_027079 283914 Hs.385772 NR_027079 ENSG00000259841 LINC01566 - long intergenic non-protein coding RNA 1566 ncRNA chr5-5749 chr5 171353254 171353464 + 5.07 0.000 Intergenic AluJr|SINE|Alu -12759 NR_145720 109616973 NR_145720 ENSG00000206909 SNORA70J - small nucleolar RNA, H/ACA box 70J snoRNA chr13-1984 chr13 23547058 23547268 + 5.07 0.000 Intergenic CpG -23207 NM_001204459 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr19-6726 chr19 38048130 38048340 + 5.07 0.000 intron (NM_015073, intron 2 of 21) MLT1L|LTR|ERVL-MaLR -114861 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr4-5580 chr4 166900522 166900732 + 5.07 0.000 intron (NM_001251967, intron 2 of 7) HERVL40-int|LTR|ERVL 333799 NM_001204353 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr4-7906 chr4 106371152 106371362 + 5.07 0.000 Intergenic Intergenic -3822 NM_001195138 100507096 Hs.722750 NM_001195138 ENSG00000250298 GIMD1 - GIMAP family P-loop NTPase domain containing 1 protein-coding chr1-14559 chr1 52829034 52829244 + 5.07 0.000 Intergenic AluSx|SINE|Alu -13621 NM_001307931 440590 Hs.658458 NM_001004339 ENSG00000203995 ZYG11A ZYG11 zyg-11 family member A, cell cycle regulator protein-coding chr6-4634 chr6 47209769 47209979 + 5.07 0.000 Intergenic L1PA11|LINE|L1 100031 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr9-7622 chr9 38057638 38057848 + 5.07 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 11484 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr5-8019 chr5 88279867 88280077 + 5.07 0.000 intron (NR_039995, intron 2 of 2) MLT1F1-int|LTR|ERVL-MaLR 10956 NR_039994 100505894 Hs.559426 NR_039993 ENSG00000247828 TMEM161B-AS1 linc-POLR3G-8 TMEM161B antisense RNA 1 ncRNA chr1-12319 chr1 246948480 246948690 + 5.07 0.000 intron (NR_037892, intron 5 of 5) intron (NR_037892, intron 5 of 5) -16637 NM_001323343 25909 Hs.300887 NM_015446 ENSG00000153207 AHCTF1 ELYS|MST108|MSTP108|TMBS62 AT-hook containing transcription factor 1 protein-coding chr3-9810 chr3 73614402 73614612 + 5.07 0.000 intron (NM_015009, intron 1 of 9) OldhAT1|DNA|hAT-Ac -9061 NR_046681 101927249 Hs.733334 NR_046681 PDZRN3-AS1 - PDZRN3 antisense RNA 1 ncRNA chr4-6504 chr4 157933152 157933362 + 5.07 0.000 Intergenic Intergenic -237495 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chrX-3527 chrX 52574525 52574735 + 5.07 0.000 Intergenic HERV1_I-int|LTR|ERV1 -48305 NR_027250 280659 Hs.694472 NM_174961 SSX8P SSX8 SSX family member 8, pseudogene pseudo chr12-4551 chr12 27545738 27545948 + 5.07 0.000 intron (NM_003622, intron 1 of 29) intron (NM_003622, intron 1 of 29) 21637 NM_003622 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr18-1355 chr18 7117700 7117910 + 5.07 0.000 promoter-TSS (NM_005559) promoter-TSS (NM_005559) -8 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr10-7433 chr10 6119483 6119693 + 5.07 0.000 Intergenic L1MC3|LINE|L1 -25333 NM_001145443 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr11-9020 chr11 25704429 25704639 + 5.07 0.000 Intergenic L2c|LINE|L2 -484589 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr8-5406 chr8 27888219 27888429 + 5.07 0.000 intron (NM_173833, intron 7 of 8) LTR39|LTR|ERV1 -2208 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr5-8040 chr5 91123952 91124162 + 5.07 0.000 intron (NR_003149, intron 87 of 89) L2a|LINE|L2 190345 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr8-5789 chr8 143859097 143859307 + 5.07 0.000 exon (NM_031308, exon 2 of 2) exon (NM_031308, exon 2 of 2) -18229 NM_178564 340371 Hs.521926 NM_178564 ENSG00000185189 NRBP2 TRG16|pp9320 nuclear receptor binding protein 2 protein-coding chr2-13140 chr2 118278029 118278239 + 5.07 0.000 Intergenic Intergenic -91748 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr3-10104 chr3 111824122 111824332 + 5.07 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) -34953 NM_145753 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr3-7812 chr3 98556658 98556868 + 5.07 0.000 Intergenic Intergenic 24785 NM_005290 2838 Hs.162987 NM_005290 ENSG00000154165 GPR15 BOB G protein-coupled receptor 15 protein-coding chr18-2791 chr18 3050227 3050437 + 5.07 0.000 Intergenic SVA_B|Retroposon|SVA -38385 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr4-5469 chr4 55910022 55910232 + 5.07 0.000 Intergenic LTR26|LTR|ERV1 -38818 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr3-8429 chr3 113265411 113265621 + 5.07 0.000 intron (NM_001301861, intron 4 of 19) intron (NM_001301861, intron 4 of 19) 53400 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr12-4126 chr12 67469324 67469534 + 5.07 0.000 Intergenic L1MA1|LINE|L1 -26870 NR_146500 102724433 NR_146500 ENSG00000256172 LINC02420 - long intergenic non-protein coding RNA 2420 ncRNA chrX-1036 chrX 91088714 91088924 + 5.07 0.000 Intergenic AluSg|SINE|Alu -346020 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr4-8535 chr4 163754965 163755175 + 5.07 0.000 intron (NM_001166373, intron 3 of 7) MER20|DNA|hAT-Charlie -141536 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr6-7239 chr6 41374409 41374619 + 5.07 0.000 Intergenic CpG 38906 NM_004828 9436 Hs.194721 NM_004828 ENSG00000096264 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding chr11-10186 chr11 95308786 95308996 + 5.07 0.000 Intergenic Intergenic -76416 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr18-2589 chr18 13274022 13274232 + 5.07 0.000 intron (NM_181482, intron 1 of 5) intron (NM_181482, intron 1 of 5) -3978 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr3-9727 chr3 67295190 67295400 + 5.07 0.000 Intergenic Intergenic 69831 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr4-3391 chr4 33733746 33733956 + 5.07 0.000 Intergenic HERVL-int|LTR|ERVL 306042 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr4-7399 chr4 63459615 63459825 + 5.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR 949730 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr11-7454 chr11 123406036 123406246 + 5.07 0.000 intron (NM_001367419, intron 1 of 20) AluSz|SINE|Alu -24128 NM_001354837 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr13-2392 chr13 41973363 41973573 + 5.07 0.000 intron (NR_039974, intron 2 of 3) intron (NR_039974, intron 2 of 3) 12299 NR_039974 100507240 Hs.147766 NR_039974 ENSG00000278338 VWA8-AS1 - VWA8 antisense RNA 1 (head to head) ncRNA chr7-5766 chr7 75851436 75851646 + 5.07 0.000 Intergenic AluSx1|SINE|Alu -27451 NR_144391 57414 Hs.488827 NM_020684 ENSG00000005486 RHBDD2 NPD007|RHBDL7 rhomboid domain containing 2 protein-coding chr21-1439 chr21 27481043 27481253 + 5.07 0.000 Intergenic Intergenic -241231 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr14-3774 chr14 54798073 54798283 + 5.07 0.000 Intergenic Intergenic 43345 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr6-5973 chr6 85602736 85602946 + 5.07 0.000 Intergenic AluSx|SINE|Alu -8685 NR_146774 57231 Hs.485871 NM_020468 ENSG00000135317 SNX14 RGS-PX2|SCAR20 sorting nexin 14 protein-coding chr4-5812 chr4 93100594 93100804 + 5.07 0.000 intron (NM_001510, intron 3 of 15) intron (NM_001510, intron 3 of 15) -728054 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr1-15563 chr1 159015560 159015770 + 5.07 0.000 intron (NM_001206567, intron 2 of 10) intron (NM_001206567, intron 2 of 10) 5758 NM_001206567 3428 Hs.380250 NM_005531 ENSG00000163565 IFI16 IFNGIP1|PYHIN2 interferon gamma inducible protein 16 protein-coding chrX-4042 chrX 18001205 18001415 + 5.07 0.000 intron (NR_133641, intron 1 of 4) intron (NR_133641, intron 1 of 4) 103334 NR_133641 105373144 NR_133641 ENSG00000225882 LINC01456 - long intergenic non-protein coding RNA 1456 ncRNA chr8-4137 chr8 74685264 74685474 + 5.07 0.000 intron (NR_033830, intron 2 of 5) intron (NR_033830, intron 2 of 5) -20324 NR_031744 100302260 NR_031744 ENSG00000283188 MIR2052 hsa-mir-2052 microRNA 2052 ncRNA chr6-8457 chr6 154396599 154396809 + 5.07 0.000 3' UTR (NM_173515, exon 13 of 13) 3' UTR (NM_173515, exon 13 of 13) 37369 NM_001368119 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr2-8710 chr2 155356910 155357120 + 5.07 0.000 Intergenic L1PA15-16|LINE|L1 658320 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr5-3250 chr5 98109736 98109946 + 5.07 0.000 intron (NR_146477, intron 3 of 4) intron (NR_146477, intron 3 of 4) 51398 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr15-3714 chr15 49098467 49098677 + 5.07 0.000 Intergenic Intergenic -52126 NM_014701 9728 Hs.9997 NM_014701 ENSG00000138593 SECISBP2L SBP2L|SLAN SECIS binding protein 2 like protein-coding chr3-9067 chr3 26066042 26066252 + 5.07 0.000 Intergenic Intergenic -192452 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr5-4090 chr5 65942047 65942257 + 5.07 0.000 intron (NM_001253697, intron 1 of 25) intron (NM_001253697, intron 1 of 25) 3421 NR_028474 100303749 Hs.608060 NR_028474 LOC100303749 - LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene pseudo chr2-11609 chr2 3116617 3116827 + 5.07 0.000 intron (NR_110228, intron 3 of 6) intron (NR_110228, intron 3 of 6) 9304 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr9-7265 chr9 5608444 5608654 + 5.07 0.000 Intergenic L1ME4b|LINE|L1 -20558 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chrX-3712 chrX 114859242 114859452 + 5.07 0.000 intron (NM_001256760, intron 6 of 6) L1M5|LINE|L1 35893 NR_029955 554212 NR_029955 ENSG00000199001 MIR448 MIRN448|hsa-mir-448|miRNA448 microRNA 448 ncRNA chr14-2163 chr14 90737409 90737619 + 5.07 0.000 intron (NM_001320421, intron 4 of 20) L1MB8|LINE|L1 40181 NR_135190 105370622 Hs.662373 NR_135190 ENSG00000258716 LOC105370622 - uncharacterized LOC105370622 ncRNA chr15-3587 chr15 52288254 52288464 + 5.07 0.000 intron (NM_018728, intron 1 of 40) intron (NM_018728, intron 1 of 40) 7445 NM_018728 55930 Hs.487036 NM_018728 ENSG00000128833 MYO5C - myosin VC protein-coding chrY-20 chrY 10776411 10776621 + 5.07 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat 865718 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 ncRNA chr10-8021 chr10 62887227 62887437 + 5.07 0.000 Intergenic Charlie8|DNA|hAT-Charlie -68165 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chrX-3649 chrX 99698697 99698907 + 5.07 0.000 Intergenic Intergenic 711471 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr7-8648 chr7 70682739 70682949 + 5.07 0.000 intron (NM_015570, intron 5 of 18) MLT1G1|LTR|ERVL-MaLR -449300 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr11-10317 chr11 108931393 108931603 + 5.07 0.000 intron (NM_004398, intron 17 of 17) intron (NM_004398, intron 17 of 17) 266429 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr5-8414 chr5 127248030 127248240 + 5.07 0.000 Intergenic L1ME4a|LINE|L1 -42629 NM_001308121 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr7-7491 chr7 100509352 100509562 + 5.07 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 25530 NM_173564 222950 Hs.320086 NM_173564 ENSG00000166924 NYAP1 C7orf51 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 protein-coding chr2-10433 chr2 202870968 202871178 + 5.07 0.000 intron (NM_138468, intron 1 of 13) intron (NM_138468, intron 1 of 13) 399 NM_001288623 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr16-6510 chr16 60632246 60632456 + 5.07 0.000 Intergenic LTR49-int|LTR|ERV1 -272558 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr3-7978 chr3 177041568 177041778 + 5.07 0.000 intron (NM_001321194, intron 11 of 16) intron (NM_001321194, intron 11 of 16) 154805 NM_001321195 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr1-13660 chr1 11198801 11199011 + 5.07 0.000 intron (NM_004958, intron 28 of 57) intron (NM_004958, intron 28 of 57) 9551 NM_021146 10218 Hs.146559 NM_021146 ENSG00000171819 ANGPTL7 AngX|CDT6|dJ647M16.1 angiopoietin like 7 protein-coding chr11-9150 chr11 34325381 34325591 + 5.07 0.000 intron (NM_145804, intron 1 of 16) MIR|SINE|MIR 32524 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr4-5281 chr4 175092758 175092968 + 5.07 0.000 Intergenic LTR12C|LTR|ERV1 174505 NM_001130704 11086 Hs.126838 NM_014269 ENSG00000168594 ADAM29 CT73|svph1 ADAM metallopeptidase domain 29 protein-coding chr9-7844 chr9 84325232 84325442 + 5.07 0.000 intron (NM_022127, intron 2 of 18) intron (NM_022127, intron 2 of 18) 15421 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr5-3397 chr5 142685998 142686208 + 5.07 0.000 promoter-TSS (NM_001257209) promoter-TSS (NM_001257209) -13 NM_000800 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr12-3624 chr12 82504655 82504865 + 5.07 0.000 Intergenic Intergenic -145955 NR_033192 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr3-9835 chr3 77155103 77155313 + 5.07 0.000 intron (NM_001290039, intron 2 of 26) MLT1D|LTR|ERVL-MaLR 57196 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr10-6539 chr10 70028622 70028832 + 5.07 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -24119 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr2-13203 chr2 121897550 121897760 + 5.07 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 142004 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr9-6510 chr9 103935904 103936114 + 5.07 0.000 Intergenic Intergenic -63700 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chrX-4567 chrX 70070653 70070863 + 5.07 0.000 Intergenic Intergenic 8301 NM_207320 139562 Hs.447381 NM_207320 ENSG00000189401 OTUD6A DUBA2|HSHIN6 OTU deubiquitinase 6A protein-coding chr8-6432 chr8 60151165 60151375 + 5.07 0.000 Intergenic L1MEc|LINE|L1 130130 NM_001321839 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr22-3556 chr22 17517757 17517967 + 5.07 0.000 intron (NM_001290046, intron 8 of 18) intron (NM_001290046, intron 8 of 18) -45577 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr18-2771 chr18 1212476 1212686 + 5.07 0.000 Intergenic L1MA5A|LINE|L1 147048 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr2-12447 chr2 58867541 58867751 + 5.07 0.000 intron (NR_033873, intron 3 of 13) MER21A|LTR|ERVL 346893 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr20-4182 chr20 45395158 45395368 + 5.07 0.000 intron (NR_003189, intron 3 of 5) LTR2752|LTR|ERV1 -10730 NM_001197139 55861 Hs.730643 NM_018478 ENSG00000244274 DBNDD2 C20orf35|CK1BP|HSMNP1 dysbindin domain containing 2 protein-coding chr9-8344 chr9 116368212 116368422 + 5.07 0.000 intron (NM_002581, intron 19 of 21) intron (NM_002581, intron 19 of 21) 32289 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr5-6439 chr5 160969941 160970151 + 5.07 0.000 Intergenic LTR16A|LTR|ERVL -31420 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr1-12115 chr1 162485559 162485769 + 5.07 0.000 Intergenic LTR41C|LTR|ERVL -11510 NM_001184763 127933 Hs.127310 NM_144624 ENSG00000152332 UHMK1 KIS|KIST|P-CIP2 U2AF homology motif kinase 1 protein-coding chrX-2231 chrX 44816950 44817160 + 5.07 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -26966 NM_022076 63904 Hs.534478 NM_022076 ENSG00000189037 DUSP21 LMWDSP21 dual specificity phosphatase 21 protein-coding chr1-15430 chr1 153227635 153227845 + 5.07 0.000 Intergenic L2b|LINE|L2 10156 NM_001195571 574414 Hs.135098 NM_001195571 ENSG00000203783 PRR9 - proline rich 9 protein-coding chr4-7405 chr4 64269938 64270148 + 5.07 0.000 Intergenic AluSc|SINE|Alu 139407 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr1-5670 chr1 37715919 37716129 + 5.07 0.000 TTS (NM_001099439) TTS (NM_001099439) 23508 NM_018101 55143 Hs.524571 NM_018101 ENSG00000134690 CDCA8 BOR|BOREALIN|DasraB|MESRGP cell division cycle associated 8 protein-coding chr12-5824 chr12 31652735 31652945 + 5.07 0.000 intron (NM_001135864, intron 1 of 3) intron (NM_001135864, intron 1 of 3) 5680 NM_001135864 254013 Hs.740628 NM_173802 ENSG00000139160 ETFBKMT C12orf72|ETFB-KMT|METTL20 electron transfer flavoprotein subunit beta lysine methyltransferase protein-coding chr17-8040 chr17 50460698 50460908 + 5.07 0.000 exon (NM_001288968, exon 3 of 17) exon (NM_001288968, exon 3 of 17) -7526 NR_110232 80221 Hs.288959 NM_025149 ENSG00000167107 ACSF2 ACSMW|AVYV493 acyl-CoA synthetase family member 2 protein-coding chr6-7060 chr6 27791377 27791587 + 5.07 0.000 Intergenic Intergenic 16449 NM_003519 8340 Hs.137594 NM_003519 ENSG00000185130 HIST1H2BL H2B/c|H2BFC|dJ97D16.4 histone cluster 1 H2B family member l protein-coding chr8-6359 chr8 52740808 52741018 + 5.07 0.000 Intergenic L1MD|LINE|L1 -26447 NM_001083617 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr20-3892 chr20 31642780 31642990 + 5.07 0.000 intron (NM_032609, intron 3 of 4) L2a|LINE|L2 4973 NM_032609 84701 Hs.277101 NM_032609 ENSG00000131055 COX4I2 COX4|COX4-2|COX4B|COX4L2|COXIV-2|dJ857M17.2 cytochrome c oxidase subunit 4I2 protein-coding chr13-4370 chr13 107451094 107451304 + 5.07 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 80049 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA chr7-9494 chr7 137171994 137172204 + 5.07 0.000 Intergenic Intergenic -7758 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA chr6-7670 chr6 85012427 85012637 + 5.07 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -247934 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box transcription factor 18 protein-coding chr2-13857 chr2 177820678 177820888 + 5.07 0.000 intron (NM_001077197, intron 7 of 20) intron (NM_001077197, intron 7 of 20) 67973 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr1-12593 chr1 33754968 33755178 + 5.07 0.000 intron (NM_052896, intron 13 of 69) L2|LINE|L2 -105402 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding chr8-5362 chr8 20714263 20714473 + 5.07 0.000 Intergenic Intergenic -99442 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr3-7764 chr3 67850417 67850627 + 5.07 0.000 intron (NR_109992, intron 5 of 6) intron (NR_109992, intron 5 of 6) -141070 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr1-7238 chr1 225817649 225817859 + 5.07 0.000 intron (NM_001291163, intron 1 of 8) intron (NM_001291163, intron 1 of 8) -7600 NM_000120 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr5-7827 chr5 67376367 67376577 + 5.07 0.000 Intergenic LTR16B2|LTR|ERVL -179673 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr12-7779 chr12 96129724 96129934 + 5.07 0.000 Intergenic MIRc|SINE|MIR -64546 NM_005230 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr8-6605 chr8 73928373 73928583 + 5.07 0.000 Intergenic Intergenic 43430 NM_001204862 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding chr3-10995 chr3 179464875 179465085 + 5.07 0.000 Intergenic Intergenic -13510 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr11-10346 chr11 110762870 110763080 + 5.07 0.000 Intergenic Intergenic -49786 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr19-5778 chr19 32051702 32051912 + 5.07 0.000 Intergenic Intergenic 25945 NR_110675 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA chr7-6974 chr7 103729341 103729551 + 5.07 0.000 intron (NM_005045, intron 6 of 64) intron (NM_005045, intron 6 of 64) 260070 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr8-5563 chr8 77684377 77684587 + 5.07 0.000 Intergenic Intergenic 233785 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr19-6263 chr19 7561291 7561501 + 5.07 0.000 intron (NM_001166111, intron 33 of 33) intron (NM_001166111, intron 33 of 33) 25679 NM_001166114 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chr4-5713 chr4 36748381 36748591 + 5.07 0.000 Intergenic MER52C|LTR|ERV1 -106586 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA chr2-9374 chr2 229637512 229637722 + 5.07 0.000 intron (NM_139072, intron 1 of 12) MER63B|DNA|hAT-Blackjack 76938 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr1-8621 chr1 198088435 198088645 + 5.07 0.000 Intergenic Intergenic -68458 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr16-4989 chr16 11239192 11239402 + 5.07 0.000 Intergenic AluSx1|SINE|Alu 16885 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr4-6832 chr4 8237066 8237276 + 5.07 0.000 intron (NM_018986, intron 16 of 17) intron (NM_018986, intron 16 of 17) -32583 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr3-9123 chr3 30779835 30780045 + 5.07 0.000 intron (NM_207359, intron 13 of 14) LTR41|LTR|ERVL 114721 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr16-4166 chr16 7705247 7705457 + 5.07 0.000 intron (NM_145893, intron 12 of 13) AluY|SINE|Alu 372507 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr1-4315 chr1 39789027 39789237 + 5.07 0.000 promoter-TSS (NM_001720) promoter-TSS (NM_001720) 156 NR_135805 101929536 Hs.552820 NR_135805 ENSG00000261798 LOC101929536 - uncharacterized LOC101929536 ncRNA chr16-4542 chr16 65032347 65032557 + 5.07 0.000 intron (NM_001797, intron 2 of 12) AluJb|SINE|Alu 89611 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-14344 chr1 40758215 40758425 + 5.07 0.000 TTS (NR_029833) TTS (NR_029833) 1036 NR_029833 407031 NR_029833 ENSG00000207962 MIR30C1 MIRN30C1|mir-30c-1 microRNA 30c-1 ncRNA chr11-10538 chr11 120280602 120280812 + 5.07 0.000 intron (NM_001244682, intron 3 of 12) intron (NM_001244682, intron 3 of 12) -14775 NR_038829 649133 Hs.568902 NR_038829 ENSG00000259541 LOC649133 - uncharacterized LOC649133 ncRNA chr19-6352 chr19 11367514 11367724 + 5.07 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -7088 NM_175871 126074 Hs.631619 NM_175871 ENSG00000173928 SWSAP1 C19orf39|SWS1AP1|ZSWIM7AP1 SWIM-type zinc finger 7 associated protein 1 protein-coding chr16-5712 chr16 81861534 81861744 + 5.07 0.000 intron (NM_002661, intron 5 of 32) intron (NM_002661, intron 5 of 32) 82348 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr10-8422 chr10 85320342 85320552 + 5.07 0.000 Intergenic Intergenic 112325 NR_120669 101929646 Hs.116129 NR_120669 LINC02647 - long intergenic non-protein coding RNA 2647 ncRNA chr3-7725 chr3 51164643 51164853 + 5.07 0.000 intron (NM_004947, intron 12 of 52) intron (NM_004947, intron 12 of 52) -220543 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr2-11984 chr2 27342759 27342969 + 5.07 0.000 exon (NM_001521, exon 4 of 20) exon (NM_001521, exon 4 of 20) 7322 NR_038427 100505624 Hs.666503 NR_038427 ENSG00000234945 GTF3C2-AS1 - GTF3C2 antisense RNA 1 ncRNA chr10-8528 chr10 92723843 92724053 + 5.07 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 33993 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr8-4328 chr8 99927153 99927363 + 5.07 0.000 Intergenic SVA_C|Retroposon|SVA -33551 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr7-8187 chr7 31153546 31153756 + 5.07 0.000 Intergenic SVA_A|Retroposon|SVA 101190 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr11-5681 chr11 132126240 132126450 + 5.07 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) -157957 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr9-7392 chr9 19504924 19505134 + 5.07 0.000 Intergenic L1P3|LINE|L1 96020 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr2-7328 chr2 241053318 241053528 + 5.07 0.000 intron (NM_001080437, intron 16 of 31) intron (NM_001080437, intron 16 of 31) 48864 NM_182501 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr2-10257 chr2 119646764 119646974 + 5.07 0.000 intron (NR_073132, intron 22 of 24) intron (NR_073132, intron 22 of 24) -32298 NM_001105198 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr5-8099 chr5 96835663 96835873 + 5.07 0.000 Intergenic Intergenic -21623 NM_001198541 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr11-4776 chr11 125367923 125368133 + 5.07 0.000 intron (NM_022062, intron 5 of 12) intron (NM_022062, intron 5 of 12) -127186 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr1-14317 chr1 39625103 39625313 + 5.07 0.000 3' UTR (NM_014571, exon 5 of 5) 3' UTR (NM_014571, exon 5 of 5) 14435 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr3-10842 chr3 165626429 165626639 + 5.07 0.000 Intergenic Intergenic 210889 NM_000055 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr18-1428 chr18 12459753 12459963 + 5.07 0.000 intron (NM_020148, intron 11 of 15) intron (NM_020148, intron 11 of 15) 27084 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chr9-7512 chr9 33000841 33001051 + 5.07 0.000 intron (NM_001369005, intron 1 of 8) AluSp|SINE|Alu 630 NM_001195249 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr7-6541 chr7 46954076 46954286 + 5.07 0.000 Intergenic Intergenic -257059 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr9-6534 chr9 112304992 112305202 + 5.07 0.000 intron (NM_001244896, intron 1 of 12) intron (NM_001244896, intron 1 of 12) 27929 NM_001244898 9991 Hs.269988 NM_005156 ENSG00000119314 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding chr12-4455 chr12 13148244 13148454 + 5.07 0.000 Intergenic Intergenic -44682 NM_001367361 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr11-7538 chr11 14005335 14005545 + 5.07 0.000 intron (NM_006108, intron 2 of 15) L2|LINE|L2 42717 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr6-7800 chr6 98481848 98482058 + 5.07 0.000 Intergenic L1PA5|LINE|L1 349747 NR_148381 105447646 Hs.211213 NR_148381 PNKY - long intergenic non-protein coding RNA PNKY ncRNA chr4-7756 chr4 94012930 94013140 + 5.07 0.000 Intergenic THE1B|LTR|ERVL-MaLR 184282 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr3-8086 chr3 12936052 12936262 + 5.07 0.000 exon (NM_014869, exon 3 of 14) exon (NM_014869, exon 3 of 14) 31573 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr11-3721 chr11 14490895 14491105 + 5.07 0.000 intron (NM_016451, intron 4 of 21) AluSx3|SINE|Alu 8858 NM_016451 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr15-4037 chr15 62769858 62770068 + 5.07 0.000 intron (NM_015059, intron 38 of 55) intron (NM_015059, intron 38 of 55) -53994 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr2-10734 chr2 31072250 31072460 + 5.07 0.000 intron (NM_024572, intron 1 of 14) intron (NM_024572, intron 1 of 14) 57285 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr22-3929 chr22 36677283 36677493 + 5.07 0.000 intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 25470 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr17-7000 chr17 50949528 50949738 + 5.07 0.000 Intergenic Intergenic -81655 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr15-5301 chr15 101491344 101491554 + 5.07 0.000 Intergenic Intergenic -1465 NM_138325 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr12-4310 chr12 125955824 125956034 + 5.07 0.000 Intergenic AluSg7|SINE|Alu 27445 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr2-13658 chr2 161839664 161839874 + 5.07 0.000 intron (NM_001354443, intron 4 of 25) intron (NM_001354443, intron 4 of 25) 215353 NM_001354455 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding chr7-9121 chr7 107920209 107920419 + 5.07 0.000 3' UTR (NM_001289751, exon 13 of 13) 3' UTR (NM_001289751, exon 13 of 13) 29131 NM_000108 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr11-8490 chr11 119664813 119665023 + 5.07 0.000 exon (NM_002855, exon 6 of 6) exon (NM_002855, exon 6 of 6) 64282 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr3-10837 chr3 164815661 164815871 + 5.07 0.000 intron (NR_126405, intron 1 of 3) HERV9NC-int|LTR|ERV1 15714 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr3-8560 chr3 151130319 151130529 + 5.07 0.000 intron (NM_053002, intron 4 of 42) L2a|LINE|L2 43626 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr6-4148 chr6 205139 205349 + 5.07 0.000 non-coding (NR_126020, exon 1 of 8) non-coding (NR_126020, exon 1 of 8) 240 NR_126020 285766 Hs.657946 NR_126020 ENSG00000263667 LOC285766 - uncharacterized LOC285766 ncRNA chr12-6789 chr12 9813456 9813666 + 5.07 0.000 intron (NR_159359, intron 1 of 5) intron (NR_159359, intron 1 of 5) 13509 NR_159359 51348 Hs.183125 NM_016523 ENSG00000150045 KLRF1 CLEC5C|NKp80 killer cell lectin like receptor F1 protein-coding chr5-5867 chr5 1939180 1939390 + 5.07 0.000 Intergenic Intergenic 51954 NR_109912 101929081 Hs.519180 NR_109912 ENSG00000249326 CTD-2194D22.4 - uncharacterized LOC101929081 ncRNA chr8-6623 chr8 76749850 76750060 + 5.07 0.000 intron (NM_024721, intron 3 of 10) intron (NM_024721, intron 3 of 10) -66680 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA chr16-5293 chr16 66669457 66669667 + 5.07 0.000 intron (NM_181521, intron 1 of 3) AluY|SINE|Alu 27181 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr12-5621 chr12 56007508 56007718 + 5.07 0.000 5' UTR (NM_001351089, exon 1 of 12) 5' UTR (NM_001351089, exon 1 of 12) 109 NM_001351091 64375 Hs.553221 NM_022465 ENSG00000123411 IKZF4 EOS|ZNFN1A4 IKAROS family zinc finger 4 protein-coding chr22-4275 chr22 49307766 49307976 + 5.07 0.000 Intergenic Intergenic 235595 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chrX-5260 chrX 138669590 138669800 + 5.07 0.000 intron (NM_033642, intron 3 of 4) intron (NM_033642, intron 3 of 4) -1902 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr6-8353 chr6 148524550 148524760 + 5.07 0.000 intron (NM_001346509, intron 3 of 12) intron (NM_001346509, intron 3 of 12) 15504 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr20-3288 chr20 8917211 8917421 + 5.07 0.000 Intergenic MamRep605|LTR?|LTR? 86131 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr1-15808 chr1 177800633 177800843 + 5.07 0.000 Intergenic Intergenic 100214 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr12-8326 chr12 130010129 130010339 + 5.07 0.000 Intergenic Intergenic 32108 NR_024457 100190940 Hs.625993 NR_024457 ENSG00000214039 LINC02418 - long intergenic non-protein coding RNA 2418 ncRNA chr10-7413 chr10 4711758 4711968 + 5.07 0.000 Intergenic LTR79|LTR|ERVL -33793 NR_024475 100216001 Hs.634869 NR_024475 ENSG00000231298 MANCR LINC00704 mitotically associated long non coding RNA ncRNA chr16-4951 chr16 840670 840880 + 5.07 0.000 Intergenic L2b|LINE|L2 35332 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chrX-3042 chrX 97927691 97927901 + 5.07 0.000 Intergenic L1PA7|LINE|L1 -363261 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr11-8801 chr11 11271164 11271374 + 5.07 0.000 exon (NM_198516, exon 11 of 11) exon (NM_198516, exon 11 of 11) 81981 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr4-3973 chr4 53260 53470 + 5.07 0.000 promoter-TSS (NM_182524) promoter-TSS (NM_182524) 44 NM_182524 152687 Hs.709469 NM_182524 ENSG00000272602 ZNF595 - zinc finger protein 595 protein-coding chr22-4080 chr22 42985169 42985379 + 5.07 0.000 intron (NM_001184970, intron 1 of 10) AluSz|SINE|Alu -24938 NM_001349970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr2-14525 chr2 229003136 229003346 + 5.07 0.000 Intergenic MLT1A-int|LTR|ERVL-MaLR 228851 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr3-9770 chr3 70433130 70433340 + 5.07 0.000 Intergenic L1MC2|LINE|L1 -120597 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr6-6087 chr6 146531777 146531987 + 5.07 0.000 Intergenic MLT2D|LTR|ERVL -11951 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr8-6418 chr8 58091286 58091496 + 5.07 0.000 intron (NM_147189, intron 4 of 4) intron (NM_147189, intron 4 of 4) 96868 NM_147189 90362 Hs.154652 NM_147189 ENSG00000169122 FAM110B C8orf72 family with sequence similarity 110 member B protein-coding chr10-9186 chr10 131749843 131750053 + 5.07 0.000 Intergenic Intergenic 40251 NR_038365 399827 Hs.523353 NM_001001677 ENSG00000189275 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA chr5-6858 chr5 119524409 119524619 + 5.07 0.000 intron (NM_001199291, intron 18 of 24) intron (NM_001199291, intron 18 of 24) 72017 NM_001199291 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr17-7706 chr17 32288898 32289108 + 5.07 0.000 exon (NM_001330181, exon 3 of 8) exon (NM_001330181, exon 3 of 8) 22827 NM_001363834 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr11-7510 chr11 6264263 6264473 + 5.07 0.000 intron (NM_001318029, intron 1 of 3) intron (NM_001318029, intron 1 of 3) 4530 NM_001318029 887 Hs.203 NM_176875 ENSG00000110148 CCKBR CCK-B|CCK2R|GASR cholecystokinin B receptor protein-coding chr9-7941 chr9 90799420 90799630 + 5.07 0.000 Intergenic L1MC1|LINE|L1 -2075 NM_001174168 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr5-8333 chr5 118152184 118152394 + 5.07 0.000 intron (NR_104997, intron 2 of 2) L1PA5|LINE|L1 -130285 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA chr12-6350 chr12 57340516 57340726 + 5.07 0.000 intron (NM_001351217, intron 1 of 21) intron (NM_001351217, intron 1 of 21) 1153 NM_001351208 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr1-14391 chr1 44021138 44021348 + 5.07 0.000 intron (NM_001328629, intron 2 of 13) intron (NM_001328629, intron 2 of 13) -3903 NM_001328627 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr7-8750 chr7 77543247 77543457 + 5.07 0.000 intron (NM_001131009, intron 1 of 16) intron (NM_001131009, intron 1 of 16) 5309 NM_001131009 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chr2-12861 chr2 96787957 96788167 + 5.07 0.000 intron (NM_020184, intron 1 of 6) AluSz|SINE|Alu -10216 NR_036074 100422928 NR_036074 ENSG00000264157 MIR3127 mir-3127 microRNA 3127 ncRNA chrX-3007 chrX 51942582 51942792 + 5.07 0.000 Intergenic L1PA11|LINE|L1 49064 NM_006986 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr8-2925 chr8 3023782 3023992 + 5.07 0.000 intron (NM_033225, intron 51 of 69) intron (NM_033225, intron 51 of 69) -295436 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr1-15741 chr1 171739417 171739627 + 5.07 0.000 intron (NM_001185127, intron 1 of 7) MER21B|LTR|ERVL 2543 NM_001185127 8674 Hs.6651 NM_003762 ENSG00000117533 VAMP4 VAMP-4|VAMP24 vesicle associated membrane protein 4 protein-coding chrX-3069 chrX 113831509 113831719 + 5.07 0.000 intron (NR_131204, intron 1 of 2) MER68-int|LTR|ERVL 106604 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr1-14695 chr1 62918847 62919057 + 5.07 0.000 Intergenic Intergenic 91973 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA KQ031387.1-1 KQ031387.1 205454 205664 + 5.07 0.000 NA NA NA NA chr7-7378 chr7 66530188 66530398 + 5.07 0.000 TTS (NR_111973) TTS (NR_111973) 36602 NR_134571 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr6-5300 chr6 141893101 141893311 + 5.07 0.000 Intergenic L1MEd|LINE|L1 195593 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr1-12779 chr1 77971451 77971661 + 5.07 0.000 intron (NM_003902, intron 1 of 19) intron (NM_003902, intron 1 of 19) 7516 NR_130152 8880 Hs.567380 NM_003902 ENSG00000162613 FUBP1 FBP|FUBP|hDH V far upstream element binding protein 1 protein-coding chr1-3710 chr1 208128592 208128802 + 5.07 0.000 intron (NM_025179, intron 4 of 31) AluY|SINE|Alu 115687 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr7-7407 chr7 73914949 73915159 + 5.07 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat 53895 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr5-2850 chr5 71723635 71723845 + 5.07 0.000 Intergenic Intergenic 4465 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr9-8371 chr9 117838692 117838902 + 5.07 0.000 Intergenic AluSx1|SINE|Alu 134394 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr10-7721 chr10 31085273 31085483 + 5.07 0.000 Intergenic Intergenic -53441 NM_001143768 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr2-12752 chr2 84944680 84944890 + 5.07 0.000 Intergenic MER21C|LTR|ERVL -26376 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr9-4033 chr9 88408610 88408820 + 5.07 0.000 intron (NM_006717, intron 1 of 5) AluSq2|SINE|Alu 20271 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr3-10259 chr3 123739750 123739960 + 5.07 0.000 intron (NM_001321309, intron 5 of 32) intron (NM_001321309, intron 5 of 32) 50211 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr3-10122 chr3 113087066 113087276 + 5.07 0.000 Intergenic Intergenic -67500 NM_001319109 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr12-5932 chr12 73332705 73332915 + 5.07 0.000 Intergenic L1MEg|LINE|L1 173620 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LINC02444 - long intergenic non-protein coding RNA 2444 ncRNA chr9-7390 chr9 19375168 19375378 + 5.07 0.000 TTS (NM_017925) TTS (NM_017925) 4963 NM_001010 6194 Hs.408073 NM_001010 ENSG00000137154 RPS6 S6 ribosomal protein S6 protein-coding chr21-1062 chr21 29778229 29778439 + 5.07 0.000 intron (NM_000830, intron 1 of 16) intron (NM_000830, intron 1 of 16) 30159 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA chr16-3677 chr16 201107 201317 + 5.07 0.000 intron (NM_001330420, intron 5 of 9) intron (NM_001330420, intron 5 of 9) 20753 NM_005331 3049 Hs.247921 NM_005331 ENSG00000086506 HBQ1 HBQ hemoglobin subunit theta 1 protein-coding chr2-14453 chr2 223339286 223339496 + 5.07 0.000 Intergenic Intergenic 262970 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr12-5955 chr12 82735233 82735443 + 5.07 0.000 intron (NM_001320321, intron 1 of 10) MER96B|DNA|hAT-Tip100 48183 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr7-4707 chr7 46109948 46110158 + 5.07 0.000 Intergenic Intergenic -188781 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr10-7050 chr10 84241662 84241872 + 5.07 0.000 promoter-TSS (NM_015613) promoter-TSS (NM_015613) -221 NM_015613 26103 Hs.226000 NM_015613 ENSG00000148602 LRIT1 FIGLER9|LRRC21|PAL leucine rich repeat, Ig-like and transmembrane domains 1 protein-coding chr19-4092 chr19 15175912 15176122 + 5.07 0.000 intron (NM_000435, intron 24 of 32) intron (NM_000435, intron 24 of 32) 3333 NR_106853 102465476 NR_106853 ENSG00000275711 MIR6795 hsa-mir-6795 microRNA 6795 ncRNA chr9-7990 chr9 93346332 93346542 + 5.07 0.000 promoter-TSS (NM_001368813) promoter-TSS (NM_001368813) -23 NM_001098808 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr21-1491 chr21 39628388 39628598 + 5.07 0.000 intron (NM_001278650, intron 1 of 2) intron (NM_001278650, intron 1 of 2) -13903 NM_001356339 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr10-7364 chr10 1665464 1665674 + 5.07 0.000 intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) 71956 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr14-4061 chr14 58739308 58739518 + 5.07 0.000 Intergenic MIRb|SINE|MIR -88875 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr5-7222 chr5 8912197 8912407 + 5.07 0.000 Intergenic MLT2A2|LTR|ERVL 72570 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr11-6152 chr11 43484961 43485171 + 5.07 0.000 intron (NM_018259, intron 21 of 23) MER1A|DNA|hAT-Charlie -74590 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA chr13-2816 chr13 102763868 102764078 + 5.07 0.000 Intergenic MER51A|LTR|ERV1 -4901 NM_001146197 643677 Hs.368382 NM_001146197 ENSG00000175820 CCDC168 C13orf40 coiled-coil domain containing 168 protein-coding chr15-4498 chr15 51316950 51317160 + 5.07 0.000 intron (NM_000103, intron 1 of 9) MLT1J|LTR|ERVL-MaLR 1442 NM_001347249 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr15-4896 chr15 76951900 76952110 + 5.07 0.000 3' UTR (NM_002902, exon 7 of 7) 3' UTR (NM_002902, exon 7 of 7) 20256 NM_001271837 5955 Hs.79088 NM_002902 ENSG00000117906 RCN2 E6BP|ERC-55|ERC55|TCBP49 reticulocalbin 2 protein-coding chr18-2227 chr18 67783559 67783769 + 5.07 0.000 intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) 31158 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr1-14374 chr1 43442966 43443176 + 5.07 0.000 exon (NM_001365999, exon 59 of 72) exon (NM_001365999, exon 59 of 72) -5468 NR_106793 102465440 NR_106793 ENSG00000274975 MIR6735 hsa-mir-6735 microRNA 6735 ncRNA chr19-6058 chr19 2495309 2495519 + 5.07 0.000 Intergenic Intergenic 19287 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chrX-1186 chrX 57429205 57429415 + 5.07 0.000 intron (NM_001353840, intron 7 of 9) AluY|SINE|Alu 142456 NR_148564 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding chr5-8985 chr5 163468051 163468261 + 5.07 0.000 intron (NM_012484, intron 4 of 17) MamRep605|LTR?|LTR? 7524 NM_012485 3161 Hs.740467 NM_012484 ENSG00000072571 HMMR CD168|IHABP|RHAMM hyaluronan mediated motility receptor protein-coding chr1-13865 chr1 20973275 20973485 + 5.07 0.000 intron (NM_003760, intron 5 of 31) intron (NM_003760, intron 5 of 31) 15052 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr3-10775 chr3 157770719 157770929 + 5.07 0.000 Intergenic Intergenic 227480 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr6-3426 chr6 115043773 115043983 + 5.07 0.000 Intergenic AluYm1|SINE|Alu 599957 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr10-4634 chr10 123569753 123569963 + 5.07 0.000 Intergenic Intergenic -96497 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr13-4127 chr13 82055292 82055502 + 5.07 0.000 Intergenic L1MB4|LINE|L1 -828414 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr20-3189 chr20 47210639 47210849 + 5.07 0.000 3' UTR (NM_001281778, exon 22 of 22) 3' UTR (NM_001281778, exon 22 of 22) 43777 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA chr18-2378 chr18 73474360 73474570 + 5.07 0.000 Intergenic Intergenic 149524 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA chr11-5605 chr11 116480235 116480445 + 5.07 0.000 Intergenic Intergenic -159082 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr3-7493 chr3 154426847 154427057 + 5.07 0.000 intron (NM_001038705, intron 2 of 3) intron (NM_001038705, intron 2 of 3) 3238 NM_001038705 344758 Hs.376338 NM_001038705 ENSG00000174948 GPR149 IEDA|PGR10|R35 G protein-coupled receptor 149 protein-coding chr5-4316 chr5 153756033 153756243 + 5.07 0.000 intron (NM_000827, intron 11 of 15) L1M3a|LINE|L1 142849 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA chr4-5248 chr4 169854391 169854601 + 5.07 0.000 Intergenic MIRb|SINE|MIR -96552 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr17-6333 chr17 66424072 66424282 + 5.07 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -7323 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr7-6749 chr7 6928657 6928867 + 5.07 0.000 Intergenic Intergenic -102467 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr9-8093 chr9 98523523 98523733 + 5.07 0.000 intron (NM_005458, intron 3 of 18) intron (NM_005458, intron 3 of 18) 185307 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr4-7920 chr4 107467692 107467902 + 5.07 0.000 Intergenic Intergenic 252437 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr22-4267 chr22 48676496 48676706 + 5.07 0.000 intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) 100261 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr13-3661 chr13 32910496 32910706 + 5.07 0.000 intron (NR_047020, intron 2 of 4) intron (NR_047020, intron 2 of 4) 1051 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chrX-2017 chrX 15566812 15567022 + 5.07 0.000 intron (NM_021804, intron 16 of 18) L2a|LINE|L2 34043 NM_001371415 chr12-6072 chr12 119902131 119902341 + 5.07 0.000 Intergenic Intergenic -24916 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr3-7477 chr3 141267164 141267374 + 5.07 0.000 intron (NM_001282728, intron 3 of 6) intron (NM_001282728, intron 3 of 6) 35444 NM_001037172 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr5-7033 chr5 162223300 162223510 + 5.07 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 155763 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding chr18-1379 chr18 45658982 45659192 + 5.07 0.000 intron (NM_007163, intron 10 of 19) intron (NM_007163, intron 10 of 19) 43611 NM_007163 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr7-7325 chr7 46273492 46273702 + 5.07 0.000 Intergenic Intergenic -352325 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr17-8446 chr17 77199194 77199404 + 5.07 0.000 intron (NM_001143999, intron 8 of 16) AluSp|SINE|Alu 14086 NM_001144001 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr17-5429 chr17 35533371 35533581 + 5.07 0.000 intron (NM_001363830, intron 1 of 4) L2b|LINE|L2 4385 NM_001363830 100506736 Hs.447559 NM_001145027 ENSG00000205045 SLFN12L - schlafen family member 12 like protein-coding chr10-9098 chr10 126369222 126369432 + 5.07 0.000 intron (NM_001288974, intron 1 of 18) L2c|LINE|L2 19150 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr14-4221 chr14 96889662 96889872 + 5.07 0.000 Intergenic Intergenic -53812 NR_104113 145249 Hs.592323 NR_104113 ENSG00000225163 LINC00618 C14orf63 long intergenic non-protein coding RNA 618 ncRNA chr12-3175 chr12 50653238 50653448 + 5.07 0.000 intron (NM_173602, intron 3 of 37) (T)n|Simple_repeat|Simple_repeat -110758 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr10-7124 chr10 99640001 99640211 + 5.07 0.000 Intergenic MIR|SINE|MIR -19403 NM_001349962 57089 Hs.28326 NM_020354 ENSG00000198018 ENTPD7 LALP1 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding chr4-3863 chr4 133274034 133274244 + 5.07 0.000 Intergenic L1PA10|LINE|L1 124845 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr3-9251 chr3 39092263 39092473 + 5.07 0.000 intron (NR_144401, intron 18 of 19) intron (NR_144401, intron 18 of 19) 15259 NR_103866 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding chr13-1235 chr13 86560739 86560949 + 5.07 0.000 Intergenic AluSx|SINE|Alu -351076 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr7-7969 chr7 13236285 13236495 + 5.07 0.000 Intergenic Intergenic 548757 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr17-7504 chr17 17062594 17062804 + 5.07 0.000 intron (NM_201274, intron 1 of 23) intron (NM_201274, intron 1 of 23) 19939 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr20-4040 chr20 37159366 37159576 + 5.07 0.000 intron (NM_152503, intron 6 of 24) MER103C|DNA|hAT-Charlie -19575 NM_001135771 6185 Hs.370895 NM_002951 ENSG00000118705 RPN2 RIBIIR|RPN-II|RPNII|SWP1 ribophorin II protein-coding chr10-9157 chr10 128768593 128768803 + 5.07 0.000 Intergenic Intergenic -144135 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr10-8786 chr10 106184925 106185135 + 5.07 0.000 intron (NR_134330, intron 3 of 4) LTR33A_|LTR|ERVL 44865 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr11-7100 chr11 122984146 122984356 + 5.07 0.000 Intergenic CpG -2417 NM_001098169 390259 Hs.449687 NM_001098169 ENSG00000188909 BSX BSX1 brain specific homeobox protein-coding chr12-6800 chr12 10705800 10706010 + 5.07 0.000 intron (NM_001145426, intron 5 of 8) L1MC4|LINE|L1 17418 NM_003651 8531 Hs.221889 NM_003651 ENSG00000060138 YBX3 CSDA|CSDA1|DBPA|ZONAB Y-box binding protein 3 protein-coding chr19-7009 chr19 49555807 49556017 + 5.07 0.000 intron (NM_001363649, intron 9 of 9) CpG 24644 NM_001363649 51070 Hs.7236 NM_015953 ENSG00000142546 NOSIP CGI-25 nitric oxide synthase interacting protein protein-coding chr18-3026 chr18 26712813 26713023 + 5.07 0.000 Intergenic AluJr|SINE|Alu -9280 NR_024259 728606 Hs.170599 NR_024259 ENSG00000265369 PCAT18 LINC01092 prostate cancer associated transcript 18 ncRNA chr3-10742 chr3 155791141 155791351 + 5.07 0.000 intron (NM_173657, intron 3 of 5) L1MA3|LINE|L1 15032 NM_001308229 285315 Hs.350846 NM_173657 ENSG00000174928 C3orf33 AC3-33 chromosome 3 open reading frame 33 protein-coding chr12-7356 chr12 56461605 56461815 + 5.07 0.000 Intergenic AluJr4|SINE|Alu -6868 NM_207344 283377 Hs.128676 NM_207344 ENSG00000176422 SPRYD4 - SPRY domain containing 4 protein-coding chr14-3989 chr14 35002621 35002831 + 5.07 0.000 intron (NM_003136, intron 4 of 15) AluSc8|SINE|Alu 19734 NM_003136 6729 Hs.167535 NM_003136 ENSG00000100883 SRP54 - signal recognition particle 54 protein-coding KI270736.1-15 KI270736.1 144878 145088 + 5.07 0.000 NA NA NA NA chr2-11127 chr2 135832320 135832530 + 5.07 0.000 intron (NM_002299, intron 2 of 16) AluJr|SINE|Alu 4759 NM_002299 3938 Hs.551506 NM_002299 ENSG00000115850 LCT LAC|LPH|LPH1 lactase protein-coding chr16-4663 chr16 75886403 75886613 + 5.07 0.000 Intergenic Intergenic -160018 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr11-10265 chr11 102625512 102625722 + 5.07 0.000 promoter-TSS (NM_004771) promoter-TSS (NM_004771) -285 NM_004771 9313 Hs.591946 NM_004771 ENSG00000137674 MMP20 AI2A2|MMP-20 matrix metallopeptidase 20 protein-coding chr1-14178 chr1 33117374 33117584 + 5.07 0.000 intron (NR_146648, intron 10 of 11) intron (NR_146648, intron 10 of 11) 35301 NM_001301826 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr8-5933 chr8 19049218 19049428 + 5.07 0.000 Intergenic Intergenic -35620 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr2-13300 chr2 129711187 129711397 + 5.07 0.000 Intergenic Intergenic 166199 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr16-7006 chr16 87762664 87762874 + 5.07 0.000 intron (NM_001184856, intron 1 of 10) intron (NM_001184856, intron 1 of 10) 3217 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr18-3330 chr18 56575064 56575274 + 5.07 0.000 Intergenic MamTip2|DNA|hAT-Tip100 63423 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr10-6253 chr10 73519012 73519222 + 5.07 0.000 intron (NR_146997, intron 17 of 21) AluJb|SINE|Alu -23093 NM_001142353 5532 Hs.500067 NM_021132 ENSG00000107758 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3 catalytic subunit beta protein-coding chr10-7913 chr10 50683268 50683478 + 5.07 0.000 Intergenic Intergenic -56315 NR_135904 653308 Hs.659820 NM_001079516 ENSG00000204147 ASAH2B ASAH2C|ASAH2L|bA449O16.3|bA98I6.3 N-acylsphingosine amidohydrolase 2B protein-coding chr10-5568 chr10 89183675 89183885 + 5.07 0.000 Intergenic Intergenic 23537 NM_003956 9023 Hs.47357 NM_003956 ENSG00000138135 CH25H C25H cholesterol 25-hydroxylase protein-coding chr17-6597 chr17 51949937 51950147 + 5.07 0.000 intron (NM_001082533, intron 3 of 9) intron (NM_001082533, intron 3 of 9) 208672 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr12-8334 chr12 130959734 130959944 + 5.07 0.000 intron (NM_198827, intron 2 of 24) intron (NM_198827, intron 2 of 24) 5932 NM_001330497 283383 Hs.719239 NM_198827 ENSG00000111452 ADGRD1 GPR133|PGR25 adhesion G protein-coupled receptor D1 protein-coding chr19-5655 chr19 6167277 6167487 + 5.07 0.000 intron (NM_030924, intron 7 of 14) intron (NM_030924, intron 7 of 14) 31715 NM_001289178 81616 Hs.465720 NM_030924 ENSG00000130377 ACSBG2 BGR|BRGL|PRTD-NY3|PRTDNY3 acyl-CoA synthetase bubblegum family member 2 protein-coding chr5-4096 chr5 67552854 67553064 + 5.07 0.000 Intergenic LTR16A|LTR|ERVL 93830 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr3-8829 chr3 8629500 8629710 + 5.07 0.000 intron (NR_046358, intron 8 of 12) MIR3|SINE|MIR 15193 NR_046358 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr15-2680 chr15 78325171 78325381 + 5.07 0.000 Intergenic Intergenic -15077 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr19-5817 chr19 39487136 39487346 + 5.07 0.000 intron (NM_001001563, intron 8 of 10) intron (NM_001001563, intron 8 of 10) 6403 NM_001329559 92609 Hs.590956 NM_001001563 ENSG00000105197 TIMM50 MGCA9|TIM50|TIM50L translocase of inner mitochondrial membrane 50 protein-coding chr4-1800 chr4 22045586 22045796 + 5.07 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -96940 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr4-4300 chr4 27288142 27288352 + 5.07 0.000 Intergenic Intergenic 70768 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr11-3584 chr11 64171738 64171948 + 5.07 0.000 Intergenic SVA_F|Retroposon|SVA -5730 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 mono-ADP ribosylhydrolase 1 protein-coding chr3-5724 chr3 16596008 16596218 + 5.07 0.000 intron (NM_001351, intron 6 of 10) L3|LINE|CR1 8677 NM_001190811 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr1-13073 chr1 179195916 179196126 + 5.07 0.000 intron (NM_007314, intron 1 of 11) AluSx|SINE|Alu 33656 NM_001168237 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr17-7641 chr17 29091038 29091248 + 5.07 0.000 intron (NM_001346767, intron 33 of 39) intron (NM_001346767, intron 33 of 39) -15534 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chrX-4961 chrX 113261926 113262136 + 5.07 0.000 intron (NR_110399, intron 3 of 3) L1PA13|LINE|L1 219304 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chrX-3075 chrX 119066054 119066264 + 5.07 0.000 Intergenic Intergenic 84420 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr5-7995 chr5 84831277 84831487 + 5.07 0.000 Intergenic Intergenic -446502 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr18-2702 chr18 61475131 61475341 + 5.07 0.000 intron (NM_031891, intron 1 of 11) L2b|LINE|L2 141806 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr1-16197 chr1 207573891 207574101 + 5.07 0.000 intron (NM_000573, intron 19 of 38) AluJb|SINE|Alu -71137 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr1-11885 chr1 44522534 44522744 + 5.07 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) -22854 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr1-16683 chr1 244790382 244790592 + 5.07 0.000 Intergenic L1M4|LINE|L1 -44819 NM_001312871 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr1-15681 chr1 167060554 167060764 + 5.07 0.000 intron (NM_005814, intron 4 of 6) intron (NM_005814, intron 4 of 6) 29718 NM_005814 10223 Hs.651244 NM_005814 ENSG00000143167 GPA33 A33 glycoprotein A33 protein-coding chr1-15736 chr1 171339251 171339461 + 5.07 0.000 non-coding (NR_002719, exon 1 of 1) non-coding (NR_002719, exon 1 of 1) 460 NR_002719 7151 Hs.661092 NR_002719 TOP1P1 - DNA topoisomerase I pseudogene 1 pseudo chr2-13993 chr2 190593672 190593882 + 5.07 0.000 Intergenic Intergenic -55118 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr14-4540 chr14 42110346 42110556 + 5.07 0.000 Intergenic L1PA15-16|LINE|L1 503595 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr3-9196 chr3 36264440 36264650 + 5.07 0.000 Intergenic L1PA12|LINE|L1 -115942 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding chr11-7798 chr11 98549829 98550039 + 5.07 0.000 Intergenic L1PB1|LINE|L1 -471015 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr5-8366 chr5 121851913 121852123 + 5.07 0.000 exon (NM_177478, exon 1 of 1) exon (NM_177478, exon 1 of 1) 136 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr1-9668 chr1 48552499 48552709 + 5.07 0.000 intron (NM_001323575, intron 11 of 12) MER20|DNA|hAT-Charlie -80396 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr11-7757 chr11 78223670 78223880 + 5.07 0.000 intron (NM_012296, intron 5 of 9) intron (NM_012296, intron 5 of 9) 34856 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr1-12079 chr1 153689030 153689240 + 5.07 0.000 TTS (NR_107050) TTS (NR_107050) 658 NR_107050 102466879 NR_107050 ENSG00000274940 MIR8083 hsa-mir-8083 microRNA 8083 ncRNA chr9-3995 chr9 19695704 19695914 + 5.07 0.000 intron (NM_020344, intron 1 of 9) L1ME3C|LINE|L1 91210 NM_001193288 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr7-6959 chr7 99934894 99935104 + 5.07 0.000 Intergenic Intergenic -5379 NM_181538 349149 Hs.647524 NM_181538 ENSG00000176402 GJC3 CX29|CX30.2|CX31.3|GJE1 gap junction protein gamma 3 protein-coding chr11-7691 chr11 67796046 67796256 + 5.07 0.000 intron (NR_024249, intron 3 of 3) MIR|SINE|MIR 9185 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr9-7268 chr9 6124683 6124893 + 5.07 0.000 Intergenic Intergenic -90361 NM_001314047 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr16-4419 chr16 51822641 51822851 + 5.07 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 60227 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr16-1492 chr16 3880555 3880765 + 5.07 0.000 promoter-TSS (NM_001079846) promoter-TSS (NM_001079846) 53 NM_004380 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr2-9795 chr2 121182918 121183128 + 5.07 0.000 Intergenic Intergenic 102179 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr6-6894 chr6 12677681 12677891 + 5.07 0.000 Intergenic Intergenic -38981 NM_001322308 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr19-3150 chr19 33064763 33064973 + 5.07 0.000 promoter-TSS (NM_033103) promoter-TSS (NM_033103) 20 NM_033103 85415 Hs.466435 NM_033103 ENSG00000131941 RHPN2 P76RBE|RHOBP rhophilin Rho GTPase binding protein 2 protein-coding chrX-1952 chrX 7132519 7132729 + 5.07 0.000 intron (NM_001135565, intron 1 of 4) intron (NM_001135565, intron 1 of 4) -14666 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr7-9042 chr7 102217963 102218173 + 5.07 0.000 intron (NM_001202543, intron 20 of 23) intron (NM_001202543, intron 20 of 23) -67073 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr20-2464 chr20 31782031 31782241 + 5.07 0.000 intron (NM_012112, intron 10 of 17) intron (NM_012112, intron 10 of 17) -37239 NM_033118 85366 Hs.86092 NM_033118 ENSG00000101306 MYLK2 KMLC|MLCK|MLCK2|skMLCK myosin light chain kinase 2 protein-coding chr11-8856 chr11 13229645 13229855 + 5.07 0.000 Intergenic Intergenic -46902 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr2-6519 chr2 198262642 198262852 + 5.07 0.000 Intergenic AluSx|SINE|Alu 112350 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr7-8562 chr7 57648120 57648330 + 5.07 0.000 Intergenic Intergenic 198048 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr12-6187 chr12 18874355 18874565 + 5.07 0.000 Intergenic MIRb|SINE|MIR 136341 NM_033328 93661 Hs.131288 NM_033328 ENSG00000177938 CAPZA3 CAPPA3|Gsg3|HEL-S-86 capping actin protein of muscle Z-line subunit alpha 3 protein-coding chrX-2290 chrX 51614941 51615151 + 5.07 0.000 Intergenic Intergenic 3872 NM_001355276 347549 NM_001355276 ENSG00000224109 CENPVL3 CENPVP3 centromere protein V like 3 protein-coding chr17-6090 chr17 80503712 80503922 + 5.07 0.000 Intergenic Intergenic -27210 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr5-9047 chr5 169895975 169896185 + 5.07 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 84415 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chrX-4254 chrX 39654620 39654830 + 5.07 0.000 Intergenic Intergenic -6491 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr3-6896 chr3 156217942 156218152 + 5.07 0.000 intron (NR_046617, intron 1 of 3) L1PBa|LINE|L1 9836 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr7-8935 chr7 96031665 96031875 + 5.07 0.000 intron (NM_004411, intron 11 of 16) intron (NM_004411, intron 11 of 16) 187986 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr2-7381 chr2 5687908 5688118 + 5.07 0.000 intron (NR_110580, intron 1 of 4) L1MC1|LINE|L1 3105 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr17-4616 chr17 6710469 6710679 + 5.07 0.000 intron (NM_001284509, intron 1 of 11) intron (NM_001284509, intron 1 of 11) 2795 NM_001284509 284111 Hs.399496 NM_177550 ENSG00000141485 SLC13A5 EIEE25|INDY|NACT|mIndy solute carrier family 13 member 5 protein-coding chr7-6830 chr7 43216394 43216604 + 5.07 0.000 intron (NM_015052, intron 2 of 29) intron (NM_015052, intron 2 of 29) 65604 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr2-13815 chr2 175281882 175282092 + 5.07 0.000 Intergenic AluSx|SINE|Alu -100277 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr17-7652 chr17 29726279 29726489 + 5.07 0.000 intron (NM_033389, intron 2 of 14) L2c|LINE|L2 35048 NM_001282131 85464 Hs.654754 NM_033389 ENSG00000141298 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding chr7-9264 chr7 124022179 124022389 + 5.07 0.000 intron (NR_133947, intron 4 of 4) ERVL-B4-int|LTR|ERVL 10783 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr3-9937 chr3 89345102 89345312 + 5.07 0.000 intron (NM_182644, intron 5 of 6) intron (NM_182644, intron 5 of 6) 237586 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr4-5551 chr4 136978746 136978956 + 5.07 0.000 intron (NR_149105, intron 2 of 3) intron (NR_149105, intron 2 of 3) -214905 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr3-5124 chr3 52041123 52041333 + 5.07 0.000 Intergenic Intergenic 15343 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr10-8565 chr10 95214959 95215169 + 5.07 0.000 intron (NM_207321, intron 8 of 10) intron (NM_207321, intron 8 of 10) 20864 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr20-3416 chr20 43749750 43749960 + 5.07 0.000 Intergenic Intergenic -22853 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr11-4684 chr11 64172175 64172385 + 5.07 0.000 Intergenic SVA_F|Retroposon|SVA -6167 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 mono-ADP ribosylhydrolase 1 protein-coding chr9-5593 chr9 114236521 114236731 + 5.07 0.000 intron (NM_032888, intron 17 of 60) intron (NM_032888, intron 17 of 60) 27192 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr16-5962 chr16 4658471 4658681 + 5.07 0.000 intron (NM_001142290, intron 5 of 16) intron (NM_001142290, intron 5 of 16) -12742 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr7-8478 chr7 49903944 49904154 + 5.07 0.000 intron (NR_136188, intron 2 of 3) LTR9|LTR|ERV1 128716 NR_136188 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr7-9052 chr7 103384526 103384736 + 5.07 0.000 intron (NR_135801, intron 12 of 17) intron (NR_135801, intron 12 of 17) 36988 NM_002803 5701 Hs.437366 NM_002803 ENSG00000161057 PSMC2 MSS1|Nbla10058|S7 proteasome 26S subunit, ATPase 2 protein-coding chr22-4136 chr22 44620404 44620614 + 5.07 0.000 intron (NR_044991, intron 3 of 4) CpG 4910 NR_044991 414351 Hs.572878 NR_044991 LINC00229 C22orf10|NCRNA00229|dJ474I12.C22.2 long intergenic non-protein coding RNA 229 ncRNA chr8-6963 chr8 106505349 106505559 + 5.07 0.000 intron (NM_001198532, intron 1 of 15) L2b|LINE|L2 57530 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr10-7702 chr10 29996774 29996984 + 5.07 0.000 Intergenic Intergenic 62707 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr4-7034 chr4 26557368 26557578 + 5.07 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -26451 NM_001292054 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr21-1212 chr21 44927403 44927613 + 5.07 0.000 intron (NR_038316, intron 2 of 2) intron (NR_038316, intron 2 of 2) 1307 NM_001127491 3689 Hs.375957 NM_000211 ENSG00000160255 ITGB2 CD18|LAD|LCAMB|LFA-1|MAC-1|MF17|MFI7 integrin subunit beta 2 protein-coding chr10-7543 chr10 14843494 14843704 + 5.07 0.000 non-coding (NR_103464, exon 5 of 5) non-coding (NR_103464, exon 5 of 5) 5293 NM_016299 51182 Hs.534169 NM_016299 ENSG00000187522 HSPA14 HSP70-4|HSP70L1 heat shock protein family A (Hsp70) member 14 protein-coding chr6-3022 chr6 50554353 50554563 + 5.07 0.000 Intergenic Intergenic -159086 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr15-3693 chr15 41381731 41381941 + 5.07 0.000 TTS (NM_001243142) TTS (NM_001243142) 20660 NM_016013 51103 Hs.106529 NM_016013 ENSG00000137806 NDUFAF1 CGI-65|CGI65|CIA30|MC1DN11 NADH:ubiquinone oxidoreductase complex assembly factor 1 protein-coding chr21-1887 chr21 43897311 43897521 + 5.07 0.000 intron (NM_001369878, intron 1 of 8) SVA_A|Retroposon|SVA -19372 NM_001369880 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr4-3739 chr4 78708793 78709003 + 5.07 0.000 Intergenic AluJr4|SINE|Alu 62904 NR_038303 100505702 Hs.235795 NR_038303 LINC01094 - long intergenic non-protein coding RNA 1094 ncRNA chr20-4118 chr20 41762637 41762847 + 5.07 0.000 Intergenic L1PA8|LINE|L1 -144365 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr17-6700 chr17 78995829 78996039 + 5.07 0.000 intron (NM_138793, intron 2 of 3) intron (NM_138793, intron 2 of 3) 13830 NM_138793 124583 Hs.8859 NM_138793 ENSG00000171302 CANT1 DBQD|DBQD1|EDM7|SCAN-1|SCAN1|SHAPY calcium activated nucleotidase 1 protein-coding chr17-7370 chr17 7602516 7602726 + 5.07 0.000 intron (NM_004860, intron 6 of 16) AluSg|SINE|Alu -11443 NM_001289114 6462 Hs.632235 NM_001040 ENSG00000129214 SHBG ABP|SBP|TEBG sex hormone binding globulin protein-coding chr10-8233 chr10 73893217 73893427 + 5.07 0.000 Intergenic Intergenic -17779 NM_001145031 5328 Hs.77274 NM_002658 ENSG00000122861 PLAU ATF|BDPLT5|QPD|UPA|URK|u-PA plasminogen activator, urokinase protein-coding chr20-3613 chr20 6063598 6063808 + 5.07 0.000 Intergenic L2a|LINE|L2 -9643 NM_152611 164312 Hs.149133 NM_152611 ENSG00000125872 LRRN4 C20orf75|NLRR-4|NLRR4|dJ1056H1.1 leucine rich repeat neuronal 4 protein-coding chr15-3720 chr15 51253364 51253574 + 5.07 0.000 intron (NM_000103, intron 1 of 9) intron (NM_000103, intron 1 of 9) 2320 NM_001347253 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr20-3212 chr20 53296083 53296293 + 5.07 0.000 intron (NM_173485, intron 2 of 2) intron (NM_173485, intron 2 of 2) 110905 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr9-7847 chr9 84538813 84539023 + 5.07 0.000 Intergenic L1MA3|LINE|L1 -129540 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr6-7703 chr6 87283801 87284011 + 5.07 0.000 3' UTR (NM_198568, exon 3 of 3) 3' UTR (NM_198568, exon 3 of 3) -38682 NM_001287445 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr1-14758 chr1 67897928 67898138 + 5.07 0.000 intron (NR_040077, intron 1 of 9) intron (NR_040077, intron 1 of 9) -64566 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr4-8212 chr4 135932742 135932952 + 5.07 0.000 Intergenic LTR33B|LTR|ERVL -19167 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr17-7250 chr17 2255542 2255752 + 5.07 0.000 intron (NM_017575, intron 8 of 18) SVA_D|Retroposon|SVA 10538 NM_001256827 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr11-8935 chr11 17791086 17791296 + 5.07 0.000 intron (NR_104040, intron 11 of 11) L1ME4a|LINE|L1 55243 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chrX-1755 chrX 51392855 51393065 + 5.07 0.000 Intergenic Intergenic -13988 NM_203407 340602 Hs.97053 NM_203407 ENSG00000187690 EZHIP CXorf67 EZH inhibitory protein protein-coding chr2-13593 chr2 157507215 157507425 + 5.07 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -63231 NM_004288 9595 Hs.270 NM_004288 ENSG00000115165 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding chr2-14089 chr2 199629095 199629305 + 5.07 0.000 intron (NR_110270, intron 3 of 6) intron (NR_110270, intron 3 of 6) 21132 NR_110270 101927641 Hs.549598 NR_110270 ENSG00000238217 LINC01877 - long intergenic non-protein coding RNA 1877 ncRNA chrX-2000 chrX 13916896 13917106 + 5.07 0.000 intron (NM_001318729, intron 1 of 6) AluJb|SINE|Alu 21637 NM_001001994 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr6-7601 chr6 76382928 76383138 + 5.07 0.000 Intergenic L1M1|LINE|L1 210590 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr10-6186 chr10 21535280 21535490 + 5.07 0.000 intron (NM_001195626, intron 2 of 22) CpG-2715 1213 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr11-10322 chr11 109206717 109206927 + 5.07 0.000 Intergenic Intergenic -215368 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr8-7524 chr8 144025302 144025512 + 5.07 0.000 intron (NM_198572, intron 1 of 4) intron (NM_198572, intron 1 of 4) 13127 NM_001134374 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr20-4346 chr20 54436347 54436557 + 5.07 0.000 Intergenic MER66B|LTR|ERV1 -39141 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr10-6224 chr10 57254831 57255041 + 5.07 0.000 Intergenic MER2|DNA|TcMar-Tigger 49623 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr4-7067 chr4 30691813 30692023 + 5.07 0.000 Intergenic AluSx|SINE|Alu -28451 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr11-5206 chr11 13047463 13047673 + 5.07 0.000 Intergenic L2|LINE|L2 38252 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr1-9484 chr1 36722739 36722949 + 5.07 0.000 Intergenic Intergenic -239530 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr1-13154 chr1 202655353 202655563 + 5.07 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) -12005 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr22-3185 chr22 33329068 33329278 + 5.07 0.000 intron (NM_133642, intron 10 of 14) MER117|DNA|hAT-Charlie 107496 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr10-7872 chr10 48406271 48406481 + 5.07 0.000 intron (NM_001323302, intron 5 of 13) intron (NM_001323302, intron 5 of 13) 4764 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr1-5451 chr1 47632077 47632287 + 5.07 0.000 Intergenic Intergenic -194865 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr18-1409 chr18 2199726 2199936 + 5.07 0.000 Intergenic Intergenic 371674 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr16-4633 chr16 72813059 72813269 + 5.07 0.000 intron (NM_001164766, intron 4 of 8) intron (NM_001164766, intron 4 of 8) -148194 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr22-4153 chr22 44928119 44928329 + 5.07 0.000 intron (NR_134535, intron 2 of 11) intron (NR_134535, intron 2 of 11) 75395 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr4-7282 chr4 51946218 51946428 + 5.07 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 74040 NM_001024611 339977 Hs.661450 NM_001024611 ENSG00000188993 LRRC66 - leucine rich repeat containing 66 protein-coding chr13-1691 chr13 78768952 78769162 + 5.07 0.000 Intergenic Intergenic 70993 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr18-3538 chr18 76435763 76435973 + 5.07 0.000 intron (NM_014643, intron 3 of 6) intron (NM_014643, intron 3 of 6) -55784 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr10-8290 chr10 77220311 77220521 + 5.07 0.000 intron (NM_001322838, intron 3 of 29) intron (NM_001322838, intron 3 of 29) 79585 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr4-8469 chr4 157014594 157014804 + 5.07 0.000 Intergenic Intergenic -42900 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr1-12687 chr1 49018149 49018359 + 5.07 0.000 intron (NM_001323575, intron 5 of 12) intron (NM_001323575, intron 5 of 12) -239157 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr4-5438 chr4 18403360 18403570 + 5.07 0.000 Intergenic Intergenic -381590 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr1-15978 chr1 194103566 194103776 + 5.07 0.000 Intergenic Intergenic 798926 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr14-1435 chr14 75924858 75925068 + 5.07 0.000 intron (NM_015072, intron 31 of 31) SVA_D|Retroposon|SVA 57032 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr16-6726 chr16 73002239 73002449 + 5.07 0.000 intron (NM_006885, intron 1 of 9) intron (NM_006885, intron 1 of 9) 45784 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr11-8501 chr11 121632861 121633071 + 5.07 0.000 3' UTR (NM_003105, exon 48 of 48) 3' UTR (NM_003105, exon 48 of 48) 180652 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr4-7131 chr4 36597838 36598048 + 5.07 0.000 intron (NR_149124, intron 2 of 4) intron (NR_149124, intron 2 of 4) 43957 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA chr16-5969 chr16 4820667 4820877 + 5.07 0.000 intron (NM_001324098, intron 8 of 14) intron (NM_001324098, intron 8 of 14) -17822 NR_046480 79641 Hs.459795 NM_024589 ENSG00000067836 ROGDI KTZS rogdi atypical leucine zipper protein-coding chr12-5716 chr12 118494961 118495171 + 5.07 0.000 Intergenic AluSz6|SINE|Alu 118511 NM_022491 64426 Hs.416630 NM_022491 ENSG00000111707 SUDS3 SAP45|SDS3 SDS3 homolog, SIN3A corepressor complex component protein-coding chr1-12308 chr1 244727923 244728133 + 5.07 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 74902 NM_001297746 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr11-9650 chr11 66824968 66825178 + 5.07 0.000 intron (NM_024650, intron 13 of 16) AluSp|SINE|Alu -18368 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr3-10512 chr3 137542909 137543119 + 5.07 0.000 Intergenic L1PA15|LINE|L1 -221301 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding chr14-2865 chr14 32360750 32360960 + 5.07 0.000 intron (NM_004274, intron 1 of 13) AluJo|SINE|Alu 31557 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr1-8495 chr1 150445967 150446177 + 5.07 0.000 intron (NM_015203, intron 6 of 10) AluY|SINE|Alu -41347 NR_073513 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chrX-636 chrX 137777039 137777249 + 5.07 0.000 Intergenic AluJr|SINE|Alu 211017 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr5-7548 chr5 38515669 38515879 + 5.07 0.000 intron (NM_001127671, intron 5 of 19) intron (NM_001127671, intron 5 of 19) 40872 NM_001127671 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS LIF receptor subunit alpha protein-coding chr3-10096 chr3 110715564 110715774 + 5.07 0.000 Intergenic Intergenic 354290 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr2-11245 chr2 170519066 170519276 + 5.07 0.000 intron (NM_001083615, intron 28 of 33) intron (NM_001083615, intron 28 of 33) -168228 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr1-16287 chr1 214383638 214383848 + 5.07 0.000 exon (NM_005401, exon 13 of 19) exon (NM_005401, exon 13 of 19) 102584 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr4-7732 chr4 91101550 91101760 + 5.07 0.000 intron (NM_001145065, intron 10 of 10) intron (NM_001145065, intron 10 of 10) 866624 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr11-10570 chr11 122369427 122369637 + 5.07 0.000 intron (NR_137179, intron 1 of 4) intron (NR_137179, intron 1 of 4) -1544 NR_137192 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr19-5756 chr19 19452707 19452917 + 5.07 0.000 intron (NM_001300946, intron 2 of 12) intron (NM_001300946, intron 2 of 12) 17749 NR_030370 693225 NR_030370 ENSG00000207821 MIR640 MIRN640|hsa-mir-640 microRNA 640 ncRNA chr4-6315 chr4 87697878 87698088 + 5.07 0.000 Intergenic MER52C|LTR|ERV1 47703 NM_004407 1758 Hs.652366 NM_004407 ENSG00000152592 DMP1 ARHP|ARHR|DMP-1 dentin matrix acidic phosphoprotein 1 protein-coding chr2-14559 chr2 230964436 230964646 + 5.07 0.000 Intergenic LTR12C|LTR|ERV1 31491 NR_033879 348761 Hs.404807 NR_033879 ENSG00000238062 SPATA3-AS1 - SPATA3 antisense RNA 1 (head to head) ncRNA chr21-1558 chr21 9942564 9942774 + 5.07 0.000 Intergenic MER1B|DNA|hAT-Charlie -121608 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr2-11029 chr2 109074902 109075112 + 5.07 0.000 Intergenic AluSg|SINE|Alu -54198 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr12-8048 chr12 114903447 114903657 + 5.07 0.000 Intergenic (CTCC)n|Simple_repeat|Simple_repeat -219377 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr13-2624 chr13 77386826 77387036 + 5.07 0.000 Intergenic Intergenic -59837 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr12-6919 chr12 24512588 24512798 + 5.07 0.000 intron (NM_152989, intron 1 of 17) MIR3|SINE|MIR 49798 NM_001261414 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr9-8020 chr9 94932485 94932695 + 5.07 0.000 3' UTR (NM_001193331, exon 8 of 8) 3' UTR (NM_001193331, exon 8 of 8) 12964 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr5-3667 chr5 160600147 160600357 + 5.07 0.000 intron (NM_001366652, intron 20 of 24) MIRc|SINE|MIR 85139 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding KI270830.1-3 KI270830.1 153095 153305 + 5.07 0.000 NA NA NA NA chr4-7903 chr4 106033184 106033394 + 5.07 0.000 Intergenic L1PB1|LINE|L1 -10811 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chr11-8040 chr11 20167520 20167730 + 5.07 0.000 Intergenic LTR33|LTR|ERVL -7150 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr6-6495 chr6 117311874 117312084 + 5.07 0.000 intron (NM_002944, intron 38 of 42) intron (NM_002944, intron 38 of 42) 46421 NM_182645 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chrX-4771 chrX 96157604 96157814 + 5.07 0.000 Intergenic Tigger2|DNA|TcMar-Tigger 180193 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr11-6965 chr11 114253996 114254206 + 5.07 0.000 3' UTR (NM_001354752, exon 5 of 5) 3' UTR (NM_001354752, exon 5 of 5) -41712 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr2-10077 chr2 46118755 46118965 + 5.07 0.000 intron (NM_005400, intron 11 of 14) intron (NM_005400, intron 11 of 14) -178547 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr13-2623 chr13 77292864 77293074 + 5.07 0.000 intron (NM_015057, intron 2 of 82) AluSx1|SINE|Alu 34125 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr4-5066 chr4 144146084 144146294 + 5.07 0.000 Intergenic L1PBa|LINE|L1 -5471 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr14-4446 chr14 33348376 33348586 + 5.07 0.000 intron (NM_173159, intron 3 of 11) intron (NM_173159, intron 3 of 11) -360456 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr15-3374 chr15 85698433 85698643 + 5.07 0.000 intron (NM_007200, intron 17 of 36) MER58A|DNA|hAT-Charlie 60187 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr17-6816 chr17 9349988 9350198 + 5.07 0.000 intron (NM_004853, intron 7 of 7) MER44D|DNA|TcMar-Tigger -170975 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr16-4901 chr16 89070448 89070658 + 5.07 0.000 Intergenic Intergenic -23256 NM_001243279 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr17-7852 chr17 42039660 42039870 + 5.07 0.000 exon (NM_001358661, exon 3 of 3) exon (NM_001358661, exon 3 of 3) -1739 NM_001242704 201181 Hs.443140 NM_001013624 ENSG00000187595 ZNF385C - zinc finger protein 385C protein-coding chr9-5265 chr9 79809467 79809677 + 5.07 0.000 Intergenic Intergenic -14958 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr14-3482 chr14 102241358 102241568 + 5.07 0.000 promoter-TSS (NR_073540) promoter-TSS (NR_073540) -848 NR_073541 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr12-4199 chr12 98183052 98183262 + 5.07 0.000 Intergenic Intergenic -187709 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr1-14404 chr1 44545226 44545436 + 5.07 0.000 promoter-TSS (NR_049849) promoter-TSS (NR_049849) -162 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr5-4714 chr5 41562397 41562607 + 5.07 0.000 Intergenic L2|LINE|L2 -51901 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding chr20-3236 chr20 63017487 63017697 + 5.07 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 8209 NR_033370 63930 Hs.640084 NR_033370 ENSG00000272259 LINC01749 - long intergenic non-protein coding RNA 1749 ncRNA chr19-5529 chr19 49658042 49658252 + 5.07 0.000 intron (NM_021228, intron 10 of 10) intron (NM_021228, intron 10 of 10) -6995 NR_104200 83596 Hs.289052 NM_138639 ENSG00000126453 BCL2L12 - BCL2 like 12 protein-coding chr16-6538 chr16 63588601 63588811 + 5.07 0.000 Intergenic Intergenic 1533357 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr10-6972 chr10 68388736 68388946 + 5.07 0.000 intron (NR_103476, intron 7 of 18) AluJb|SINE|Alu 18348 NM_017987 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr7-4943 chr7 137754572 137754782 + 5.07 0.000 intron (NM_001321708, intron 1 of 32) intron (NM_001321708, intron 1 of 32) 91655 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr2-14487 chr2 225889553 225889763 + 5.07 0.000 Intergenic Intergenic -253136 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr7-5336 chr7 28354521 28354731 + 5.07 0.000 intron (NM_182899, intron 1 of 9) intron (NM_182899, intron 1 of 9) 55305 NM_182899 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr16-4462 chr16 56010296 56010506 + 5.07 0.000 Intergenic Intergenic -54370 NM_001190158 221223 Hs.350800 NM_145024 ENSG00000159398 CES5A CAUXIN|CES4C1|CES5|CES7|HEL126 carboxylesterase 5A protein-coding chr7-6502 chr7 16719691 16719901 + 5.07 0.000 Intergenic Intergenic -33959 NM_014399 27075 Hs.364544 NM_014399 ENSG00000106537 TSPAN13 NET-6|NET6|TM4SF13 tetraspanin 13 protein-coding chr18-1208 chr18 35377044 35377254 + 5.07 0.000 intron (NM_001322290, intron 1 of 4) CpG 188 NM_001322290 252884 Hs.351005 NM_145756 ENSG00000186496 ZNF396 ZSCAN14 zinc finger protein 396 protein-coding chr15-4692 chr15 66287591 66287801 + 5.07 0.000 Intergenic Intergenic -5613 NM_001323936 115752 Hs.446251 NM_133375 ENSG00000166938 DIS3L DIS3L1 DIS3 like exosome 3'-5' exoribonuclease protein-coding chr1-12523 chr1 24800355 24800565 + 5.07 0.000 intron (NM_013943, intron 2 of 5) SVA_F|Retroposon|SVA 55013 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr7-7085 chr7 155593415 155593625 + 5.07 0.000 Intergenic Intergenic -22774 NM_001369813 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr3-7617 chr3 18508823 18509033 + 5.07 0.000 intron (NR_125803, intron 4 of 6) L2a|LINE|L2 -63336 NM_001322872 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr3-9803 chr3 73143836 73144046 + 5.07 0.000 Intergenic Intergenic 82282 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr1-9651 chr1 47561769 47561979 + 5.07 0.000 Intergenic Intergenic -124557 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr3-9442 chr3 49153894 49154104 + 5.07 0.000 non-coding (NR_004405, exon 1 of 1) non-coding (NR_004405, exon 1 of 1) 402 NR_004405 22973 Hs.607092 NR_004405 LAMB2P1 LAMB2L laminin subunit beta 2 pseudogene 1 pseudo chr16-4057 chr16 1525430 1525640 + 5.07 0.000 intron (NM_014714, intron 21 of 30) intron (NM_014714, intron 21 of 30) -3143 NM_001256541 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr11-9874 chr11 73938127 73938337 + 5.07 0.000 Intergenic AluJb|SINE|Alu -12087 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr9-5411 chr9 94981007 94981217 + 5.07 0.000 intron (NM_032823, intron 9 of 14) intron (NM_032823, intron 9 of 14) -35558 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr14-4860 chr14 70096838 70097048 + 5.07 0.000 intron (NM_033262, intron 2 of 7) intron (NM_033262, intron 2 of 7) -16726 NM_001130417 6547 Hs.337696 NM_033262 ENSG00000100678 SLC8A3 NCX3 solute carrier family 8 member A3 protein-coding chr2-12964 chr2 103617282 103617492 + 5.07 0.000 Intergenic AluJb|SINE|Alu -632958 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr20-4198 chr20 46226502 46226712 + 5.07 0.000 intron (NM_021248, intron 4 of 11) L2c|LINE|L2 81891 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr6-6153 chr6 1716421 1716631 + 5.07 0.000 intron (NM_001253846, intron 9 of 10) intron (NM_001253846, intron 9 of 10) 106611 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr2-8929 chr2 184646129 184646339 + 5.07 0.000 intron (NM_194250, intron 1 of 3) L1PA16|LINE|L1 47705 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr2-11119 chr2 133377594 133377804 + 5.07 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 111504 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr2-11406 chr2 218491015 218491225 + 5.07 0.000 intron (NM_020935, intron 14 of 25) AluJb|SINE|Alu 71997 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding chrX-1028 chrX 72018343 72018553 + 5.07 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -25961 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr10-7676 chr10 28515005 28515215 + 5.07 0.000 Intergenic MSTD|LTR|ERVL-MaLR 17244 NR_033805 220906 Hs.403253 NR_033805 WAC-AS1 - WAC antisense RNA 1 (head to head) ncRNA chr13-3404 chr13 95191917 95192127 + 5.07 0.000 intron (NM_001105515, intron 9 of 20) intron (NM_001105515, intron 9 of 20) -18322 NR_145733 109616987 NR_145733 SNORD13G - small nucleolar RNA, C/D box 13G snoRNA chr12-6318 chr12 53288417 53288627 + 5.07 0.000 intron (NM_012291, intron 19 of 30) intron (NM_012291, intron 19 of 30) -6929 NM_145897 5204 Hs.655327 NM_002624 ENSG00000123349 PFDN5 MM-1|MM1|PFD5 prefoldin subunit 5 protein-coding chr13-3366 chr13 78386315 78386525 + 5.07 0.000 intron (NR_047001, intron 3 of 5) intron (NR_047001, intron 3 of 5) -209702 NR_158457 780529 Hs.587755 NR_158457 LOC780529 - uncharacterized LOC780529 ncRNA chr17-6457 chr17 15882288 15882498 + 5.07 0.000 Intergenic Intergenic -62524 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr19-5215 chr19 31471769 31471979 + 5.07 0.000 Intergenic LTR78|LTR|ERV1 -116315 NM_001278576 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr15-4364 chr15 41593658 41593868 + 5.07 0.000 Intergenic LTR8|LTR|ERV1 33791 NM_001330264 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr2-9780 chr2 110740474 110740684 + 5.07 0.000 intron (NM_001371254, intron 1 of 18) intron (NM_001371254, intron 1 of 18) 8006 NM_001371254 chr13-3757 chr13 42853950 42854160 + 5.07 0.000 intron (NR_126388, intron 2 of 2) L1MC5a|LINE|L1 18689 NR_126389 104355147 Hs.633967 NR_126388 LINC00428 - long intergenic non-protein coding RNA 428 ncRNA chr17-6560 chr17 42818480 42818690 + 5.07 0.000 exon (NM_001313998, exon 6 of 12) exon (NM_001313998, exon 6 of 12) 5294 NM_001313999 8678 Hs.716464 NM_003766 ENSG00000126581 BECN1 ATG6|VPS30|beclin1 beclin 1 protein-coding chr18-2666 chr18 51980962 51981172 + 5.07 0.000 Intergenic Intergenic -359130 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr17-7473 chr17 15248824 15249034 + 5.07 0.000 intron (NR_104018, intron 1 of 2) intron (NR_104018, intron 1 of 2) 2767 NR_039884 100616125 NR_039884 ENSG00000265110 MIR4731 - microRNA 4731 ncRNA chr5-6673 chr5 60351945 60352155 + 5.07 0.000 intron (NM_001364599, intron 1 of 16) AluJr|SINE|Alu 20613 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr3-10176 chr3 117996725 117996935 + 5.07 0.000 Intergenic CpG -305905 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr9-5220 chr9 75952823 75953033 + 5.07 0.000 intron (NR_120409, intron 2 of 19) intron (NR_120409, intron 2 of 19) 62255 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr6-8240 chr6 137332810 137333020 + 5.07 0.000 Intergenic Intergenic -113485 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr9-8444 chr9 122236684 122236894 + 5.07 0.000 TTS (NR_027126) TTS (NR_027126) -7832 NM_199160 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr1-11607 chr1 226738735 226738945 + 5.07 0.000 intron (NM_002221, intron 1 of 7) CpG 335 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr5-7549 chr5 38749302 38749512 + 5.07 0.000 intron (NR_109951, intron 2 of 3) intron (NR_109951, intron 2 of 3) -29134 NR_104631 101926904 Hs.634191 NR_104631 ENSG00000249740 LINC01265 - long intergenic non-protein coding RNA 1265 ncRNA chr20-4065 chr20 38324729 38324939 + 5.07 0.000 intron (NM_001725, intron 9 of 14) intron (NM_001725, intron 9 of 14) 20684 NM_001725 671 Hs.529019 NM_001725 ENSG00000101425 BPI BPIFD1|rBPI bactericidal permeability increasing protein protein-coding chr9-6183 chr9 89270198 89270408 + 5.07 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -40892 NM_001827 1164 Hs.83758 NM_001827 ENSG00000123975 CKS2 CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding chrX-1317 chrX 130311723 130311933 + 5.07 0.000 Intergenic L1M4|LINE|L1 -28060 NM_001282197 9016 Hs.194686 NM_003951 ENSG00000102078 SLC25A14 BMCP1|UCP5 solute carrier family 25 member 14 protein-coding chr4-6398 chr4 118079990 118080200 + 5.07 0.000 intron (NM_004784, intron 2 of 13) MIR|SINE|MIR 45609 NR_146514 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chr5-6084 chr5 11127034 11127244 + 5.07 0.000 intron (NM_001288715, intron 11 of 20) intron (NM_001288715, intron 11 of 20) -365905 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr22-2829 chr22 43533189 43533399 + 5.07 0.000 intron (NM_198856, intron 28 of 29) Tigger13a|DNA|TcMar-Tigger 17040 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr1-8256 chr1 33763504 33763714 + 5.07 0.000 intron (NM_052896, intron 13 of 69) intron (NM_052896, intron 13 of 69) -96866 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding chr19-5445 chr19 30868341 30868551 + 5.07 0.000 Intergenic Intergenic -299064 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr20-1859 chr20 32986486 32986696 + 5.07 0.000 intron (NM_080675, intron 10 of 12) intron (NM_080675, intron 10 of 12) 17842 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr12-6250 chr12 41736203 41736413 + 5.07 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -27881 NR_135041 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA chr10-8835 chr10 110295560 110295770 + 5.07 0.000 intron (NM_005871, intron 4 of 5) AluSz6|SINE|Alu 9255 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr14-3754 chr14 45731393 45731603 + 5.07 0.000 Intergenic Intergenic -15896 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr2-11017 chr2 105766134 105766344 + 5.07 0.000 intron (NM_003581, intron 1 of 4) intron (NM_003581, intron 1 of 4) 21176 NM_001004722 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr13-3600 chr13 28852214 28852424 + 5.07 0.000 intron (NM_001366651, intron 2 of 14) L2a|LINE|L2 31980 NM_001366651 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr9-6999 chr9 113808573 113808783 + 5.07 0.000 Intergenic Intergenic -67604 NM_001318040 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding chr1-11440 chr1 72945197 72945407 + 5.07 0.000 Intergenic Intergenic -360868 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chr2-10345 chr2 161381427 161381637 + 5.07 0.000 intron (NM_005805, intron 7 of 11) intron (NM_005805, intron 7 of 11) -34765 NM_006593 10716 Hs.210862 NM_006593 ENSG00000136535 TBR1 IDDAS|TBR-1|TES-56 T-box brain transcription factor 1 protein-coding chr1-11633 chr1 242601170 242601380 + 5.07 0.000 Intergenic Intergenic -76578 NM_001320272 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr5-7569 chr5 40410515 40410725 + 5.07 0.000 Intergenic Intergenic -269295 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr15-4751 chr15 69324052 69324262 + 5.07 0.000 intron (NM_001104554, intron 1 of 8) (A)n|Simple_repeat|Simple_repeat 9754 NM_001104554 54852 Hs.591096 NM_017705 ENSG00000137819 PAQR5 MPRG progestin and adipoQ receptor family member 5 protein-coding chrX-2862 chrX 141900438 141900648 + 5.07 0.000 Intergenic Intergenic -3351 NM_005462 9947 Hs.132194 NM_005462 ENSG00000155495 MAGEC1 CT7|CT7.1 MAGE family member C1 protein-coding chr13-2701 chr13 91399416 91399626 + 5.07 0.000 intron (NM_004466, intron 1 of 7) intron (NM_004466, intron 1 of 7) 900 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr2-11386 chr2 214931924 214932134 + 5.07 0.000 non-coding (NR_103740, exon 55 of 55) non-coding (NR_103740, exon 55 of 55) 85082 NR_145773 109617008 NR_145773 ENSG00000207274 SNORA70I - small nucleolar RNA, H/ACA box 70I snoRNA chr10-6396 chr10 5000278 5000488 + 5.07 0.000 3' UTR (NM_001135241, exon 4 of 4) 3' UTR (NM_001135241, exon 4 of 4) 3631 NM_001321027 1646 Hs.460260 NM_001354 ENSG00000151632 AKR1C2 AKR1C-pseudo|BABP|DD|DD-2|DD/BABP|DD2|DDH2|HAKRD|HBAB|MCDR2|SRXY8|TDD aldo-keto reductase family 1 member C2 protein-coding chr8-6449 chr8 61237742 61237952 + 5.07 0.000 Intergenic Intergenic -50123 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr17-6987 chr17 50000186 50000396 + 5.07 0.000 Intergenic MER2|DNA|TcMar-Tigger -5067 NM_005220 1747 Hs.134194 NM_005220 ENSG00000064195 DLX3 AI4|TDO distal-less homeobox 3 protein-coding chr2-11278 chr2 182066733 182066943 + 5.07 0.000 intron (NM_001261425, intron 4 of 5) intron (NM_001261425, intron 4 of 5) 80985 NM_001261425 151242 Hs.10941 NM_001080545 ENSG00000150722 PPP1R1C IPP5 protein phosphatase 1 regulatory inhibitor subunit 1C protein-coding chr13-1520 chr13 23551962 23552172 + 5.07 0.000 Intergenic MER4CL34|LTR|ERV1 -18303 NM_001204459 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr20-4333 chr20 53531817 53532027 + 5.07 0.000 Intergenic MER5A1|DNA|hAT-Charlie -20848 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr10-8060 chr10 65829415 65829625 + 5.07 0.000 Intergenic L2|LINE|L2 258095 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr1-16142 chr1 205366569 205366779 + 5.07 0.000 Intergenic AluSx3|SINE|Alu -6578 NR_038425 284576 Hs.585440 NR_038425 ENSG00000226235 LEMD1-AS1 - LEMD1 antisense RNA 1 ncRNA chr11-8863 chr11 13504980 13505190 + 5.07 0.000 Intergenic L1MC3|LINE|L1 -8910 NM_001316352 5741 Hs.37045 NM_000315 ENSG00000152266 PTH PTH1 parathyroid hormone protein-coding chr20-3389 chr20 37076909 37077119 + 5.07 0.000 intron (NM_002895, intron 2 of 21) AluSx3|SINE|Alu 18983 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr5-8583 chr5 137791078 137791288 + 5.07 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -10010 NR_002713 4888 Hs.643466 NR_002713 ENSG00000226306 NPY6R NPY1RL|NPY6RP|PP2|Y2B neuropeptide Y receptor Y6 (pseudogene) pseudo chr6-5968 chr6 85020738 85020948 + 5.07 0.000 Intergenic L1PA8A|LINE|L1 -256245 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box transcription factor 18 protein-coding chr22-4133 chr22 44565192 44565402 + 5.07 0.000 Intergenic L1MEc|LINE|L1 -4043 NR_028411 388910 Hs.332685 NM_001012986 ENSG00000187012 LINC00207 NCRNA00207 long intergenic non-protein coding RNA 207 ncRNA chr7-5987 chr7 102190427 102190637 + 5.07 0.000 intron (NM_001913, intron 12 of 22) intron (NM_001913, intron 12 of 22) -94609 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr2-3739 chr2 241445120 241445330 + 5.07 0.000 intron (NM_014808, intron 13 of 26) AluJo|SINE|Alu -32680 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr1-10340 chr1 153873834 153874044 + 5.07 0.000 intron (NM_020699, intron 1 of 10) MSTC|LTR|ERVL-MaLR 49033 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr5-7736 chr5 59559884 59560094 + 5.07 0.000 intron (NM_001349242, intron 1 of 16) intron (NM_001349242, intron 1 of 16) 26509 NM_001349242 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chrX-3029 chrX 79355770 79355980 + 5.07 0.000 Intergenic MSTA|LTR|ERVL-MaLR 11459 NM_004867 9452 Hs.17109 NM_004867 ENSG00000078596 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding chr12-7949 chr12 109518949 109519159 + 5.07 0.000 intron (NM_130466, intron 19 of 27) intron (NM_130466, intron 19 of 27) 41420 NM_130466 89910 Hs.374067 NM_130466 ENSG00000151148 UBE3B BPIDS|KOS ubiquitin protein ligase E3B protein-coding chr5-8163 chr5 102989184 102989394 + 5.07 0.000 intron (NM_001364592, intron 15 of 24) AluJb|SINE|Alu 123466 NM_000919 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr5-5865 chr5 1672454 1672664 + 5.07 0.000 Intergenic Intergenic 36309 NR_036240 100422966 NR_036240 ENSG00000263746 MIR4277 - microRNA 4277 ncRNA chr2-10016 chr2 26007571 26007781 + 5.07 0.000 Intergenic AluSx|SINE|Alu -25179 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C - kinesin family member 3C protein-coding chr13-3449 chr13 109483214 109483424 + 5.07 0.000 Intergenic (CACATGG)n|Simple_repeat|Simple_repeat 82623 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr10-6277 chr10 87578379 87578589 + 5.07 0.000 Intergenic Intergenic 70651 NM_001178118 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding chr2-11690 chr2 9058507 9058717 + 5.07 0.000 Intergenic LTR50|LTR|ERVL -54928 NM_001321267 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr8-7330 chr8 133905540 133905750 + 5.07 0.000 Intergenic Intergenic 19149 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chrX-3499 chrX 40175852 40176062 + 5.07 0.000 intron (NM_001123384, intron 1 of 13) CpG 1320 NM_001123384 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr5-8282 chr5 113340916 113341126 + 5.07 0.000 intron (NM_001085377, intron 2 of 18) intron (NM_001085377, intron 2 of 18) -46083 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr18-2374 chr18 63344615 63344825 + 5.07 0.000 intron (NM_002035, intron 6 of 9) intron (NM_002035, intron 6 of 9) 22486 NM_002035 2531 Hs.74050 NM_002035 ENSG00000119537 KDSR DHSR|EKVP4|FVT1|SDR35C1 3-ketodihydrosphingosine reductase protein-coding chr4-6935 chr4 17263593 17263803 + 5.07 0.000 Intergenic Tigger8|DNA|TcMar-Tigger 57184 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr3-8936 chr3 13664807 13665017 + 5.07 0.000 intron (NR_027103, intron 1 of 5) intron (NR_027103, intron 1 of 5) 14191 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr12-4172 chr12 89703526 89703736 + 5.07 0.000 intron (NM_001366520, intron 1 of 21) intron (NM_001366520, intron 1 of 21) 5207 NM_001366532 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr17-4481 chr17 65332418 65332628 + 5.07 0.000 Intergenic Intergenic -125018 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr11-7784 chr11 93498721 93498931 + 5.07 0.000 intron (NM_020179, intron 2 of 2) L2b|LINE|L2 44565 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr5-5107 chr5 99984034 99984244 + 5.07 0.000 Intergenic AluSc8|SINE|Alu 404115 NR_027503 100133050 Hs.534796 NR_027503 LOC100133050 - glucuronidase beta pseudogene pseudo chr16-3350 chr16 30168892 30169102 + 5.07 0.000 Intergenic SVA_D|Retroposon|SVA -14413 NM_001193333 11151 Hs.415067 NM_007074 ENSG00000102879 CORO1A CLABP|CLIPINA|HCORO1|IMD8|TACO|p57 coronin 1A protein-coding chr5-6491 chr5 178280156 178280366 + 5.07 0.000 intron (NM_173465, intron 5 of 28) intron (NM_173465, intron 5 of 28) -47439 NM_001278346 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr4-5524 chr4 104494124 104494334 + 5.07 0.000 intron (NM_025212, intron 1 of 2) intron (NM_025212, intron 1 of 2) 665 NR_132741 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr4-6220 chr4 57143983 57144193 + 5.07 0.000 intron (NR_034081, intron 1 of 4) L1MA4A|LINE|L1 -33703 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr7-4480 chr7 137961264 137961474 + 5.07 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 8021 NR_161346 100130880 Hs.712161 NR_161346 CREB3L2-AS1 - CREB3L2 antisense RNA 1 ncRNA chr7-5922 chr7 98947875 98948085 + 5.07 0.000 intron (NM_001244580, intron 32 of 71) intron (NM_001244580, intron 32 of 71) -65185 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr1-8877 chr1 4611241 4611451 + 5.07 0.000 Intergenic Intergenic 39859 NR_147025 105376679 NR_147025 ENSG00000232596 LINC01646 - long intergenic non-protein coding RNA 1646 ncRNA chr8-4827 chr8 22852843 22853053 + 5.07 0.000 intron (NM_001363233, intron 3 of 6) intron (NM_001363233, intron 3 of 6) -25024 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr10-6435 chr10 22253145 22253355 + 5.07 0.000 non-coding (NR_038921, exon 1 of 1) non-coding (NR_038921, exon 1 of 1) 1178 NR_038921 100130992 Hs.48501 NR_038921 LOC100130992 - uncharacterized LOC100130992 ncRNA chr11-8707 chr11 6262401 6262611 + 5.07 0.000 intron (NM_001318029, intron 1 of 3) L2b|LINE|L2 2668 NM_001318029 887 Hs.203 NM_176875 ENSG00000110148 CCKBR CCK-B|CCK2R|GASR cholecystokinin B receptor protein-coding chr16-5923 chr16 3179899 3180109 + 5.07 0.000 Intergenic Intergenic -8200 NM_001370640 4992 Hs.664502 NM_012360 ENSG00000168124 OR1F1 OLFMF|OR16-36|OR16-37|OR16-88|OR16-89|OR16-90|OR1F10|OR1F13P|OR1F4|OR1F5|OR1F6|OR1F7|OR1F8|OR1F9|OR3-145|ORL1023 olfactory receptor family 1 subfamily F member 1 protein-coding chr6-5809 chr6 15389933 15390143 + 5.07 0.000 intron (NM_004973, intron 2 of 17) intron (NM_004973, intron 2 of 17) 141183 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr8-5934 chr8 19080436 19080646 + 5.07 0.000 Intergenic Intergenic -66838 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr7-6098 chr7 118363819 118364029 + 5.07 0.000 Intergenic Intergenic 139220 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr7-7846 chr7 4842308 4842518 + 5.07 0.000 intron (NM_018059, intron 2 of 14) intron (NM_018059, intron 2 of 14) -4963 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr16-6561 chr16 65480802 65481012 + 5.07 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 95393 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr11-5436 chr11 70074521 70074731 + 5.07 0.000 intron (NR_103835, intron 2 of 2) intron (NR_103835, intron 2 of 2) 722 NR_103835 100009613 Hs.131238 NR_103835 LINC02584 ANO1-AS2|C11orf78|NCRNA00224 long intergenic non-protein coding RNA 2584 ncRNA chr7-9406 chr7 131798320 131798530 + 5.07 0.000 Intergenic Intergenic -111795 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr13-3030 chr13 23731886 23732096 + 5.07 0.000 intron (NM_005932, intron 18 of 18) AluJb|SINE|Alu 152631 NM_001354985 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr2-14313 chr2 217491949 217492159 + 5.07 0.000 intron (NR_026597, intron 2 of 12) intron (NR_026597, intron 2 of 12) 209321 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2-7667 chr2 29155660 29155870 + 5.07 0.000 intron (NM_001287528, intron 9 of 14) intron (NM_001287528, intron 9 of 14) 40350 NM_001287527 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr11-9207 chr11 37735181 37735391 + 5.07 0.000 Intergenic L1MC5a|LINE|L1 -203315 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr4-7284 chr4 52200195 52200405 + 5.07 0.000 Intergenic Intergenic 148996 NM_001297608 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr16-4534 chr16 63885356 63885566 + 5.07 0.000 Intergenic AluSx|SINE|Alu 1236602 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chrX-4579 chrX 71400834 71401044 + 5.07 0.000 intron (NR_104387, intron 24 of 39) intron (NR_104387, intron 24 of 39) 34582 NR_104387 6872 Hs.158560 NM_004606 ENSG00000147133 TAF1 BA2R|CCG1|CCGS|DYT3|DYT3/TAF1|KAT4|MRXS33|N-TAF1|NSCL2|OF|P250|TAF(II)250|TAF2A|TAFII-250|TAFII250|XDP TATA-box binding protein associated factor 1 protein-coding chr21-1334 chr21 27306961 27307171 + 5.07 0.000 Intergenic Intergenic -339978 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr7-9368 chr7 130167408 130167618 + 5.07 0.000 intron (NR_156699, intron 14 of 14) intron (NR_156699, intron 14 of 14) 25782 NR_149033 100128325 Hs.105944 NR_149033 ENSG00000229196 LOC100128325 - uncharacterized LOC100128325 ncRNA chr4-5962 chr4 167976648 167976858 + 5.07 0.000 Intergenic L1PA13|LINE|L1 -115784 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr1-15863 chr1 181832409 181832619 + 5.07 0.000 Intergenic LTR12C|LTR|ERV1 229198 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr8-5976 chr8 21745275 21745485 + 5.07 0.000 intron (NM_001495, intron 4 of 8) intron (NM_001495, intron 4 of 8) 43495 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr6-8611 chr6 169177443 169177653 + 5.07 0.000 intron (NR_125863, intron 2 of 2) intron (NR_125863, intron 2 of 2) 5192 NR_125863 101929504 Hs.147721 NR_125863 ENSG00000261039 LINC02544 - long intergenic non-protein coding RNA 2544 ncRNA chr5-8323 chr5 117409122 117409332 + 5.07 0.000 Intergenic AluSg|SINE|Alu -6285 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA chr6-6840 chr6 7861895 7862105 + 5.07 0.000 intron (NM_001718, intron 3 of 6) intron (NM_001718, intron 3 of 6) 48077 NM_001145549 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr22-3881 chr22 34998971 34999181 + 5.07 0.000 Intergenic Charlie1b|DNA|hAT-Charlie -1160 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr20-4176 chr20 45008557 45008767 + 5.07 0.000 intron (NM_001352385, intron 9 of 11) L1PA16|LINE|L1 42150 NR_147974 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding chr7-8905 chr7 93713333 93713543 + 5.07 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -3490 NR_039796 100616206 NR_039796 ENSG00000265423 MIR4652 - microRNA 4652 ncRNA chr10-7199 chr10 111890441 111890651 + 5.07 0.000 Intergenic Intergenic 293219 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr1-14077 chr1 29682945 29683155 + 5.07 0.000 Intergenic Intergenic -332936 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr1-8952 chr1 9025585 9025795 + 5.07 0.000 intron (NM_207420, intron 1 of 11) intron (NM_207420, intron 1 of 11) 655 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr8-6301 chr8 43027474 43027684 + 5.07 0.000 3' UTR (NM_032410, exon 22 of 22) 3' UTR (NM_032410, exon 22 of 22) -28720 NR_033698 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr21-1355 chr21 36182272 36182482 + 5.07 0.000 intron (NM_005128, intron 2 of 36) MLT1L|LTR|ERVL-MaLR 17836 NM_005128 9980 Hs.204575 NM_005128 ENSG00000142197 DOP1B 21orf5|C21orf5|DOPEY2 DOP1 leucine zipper like protein B protein-coding chr9-8471 chr9 123735338 123735548 + 5.07 0.000 intron (NM_001352968, intron 4 of 18) MIRb|SINE|MIR 194683 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr1-15364 chr1 147905752 147905962 + 5.07 0.000 intron (NM_005267, intron 1 of 1) intron (NM_005267, intron 1 of 1) 3062 NM_005267 2703 Hs.632441 NM_005267 ENSG00000121634 GJA8 CAE|CAE1|CTRCT1|CX50|CZP1|MP70 gap junction protein alpha 8 protein-coding chr11-6189 chr11 45470336 45470546 + 5.07 0.000 Intergenic Intergenic 99044 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr21-1023 chr21 21126509 21126719 + 5.07 0.000 intron (NM_001352595, intron 1 of 14) intron (NM_001352595, intron 1 of 14) -20548 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr20-1563 chr20 264859 265069 + 5.07 0.000 Intergenic Intergenic 7240 NM_207469 400830 Hs.516819 NM_207469 ENSG00000186458 DEFB132 BD-32|DEFB-32|DEFB32|HEL-75|KFLL827|UNQ827 defensin beta 132 protein-coding chr1-12988 chr1 156167348 156167558 + 5.07 0.000 intron (NM_001370567, intron 9 of 13) AluJb|SINE|Alu 12905 NM_001370567 64218 Hs.408846 NM_022367 ENSG00000196189 SEMA4A CORD10|RP35|SEMAB|SEMB semaphorin 4A protein-coding chr6-6415 chr6 85565822 85566032 + 5.07 0.000 intron (NM_001350545, intron 4 of 27) intron (NM_001350545, intron 4 of 27) 27931 NM_153816 57231 Hs.485871 NM_020468 ENSG00000135317 SNX14 RGS-PX2|SCAR20 sorting nexin 14 protein-coding chr17-8096 chr17 55846605 55846815 + 5.07 0.000 Intergenic Intergenic 95605 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr2-11921 chr2 25049100 25049310 + 5.07 0.000 intron (NM_001319099, intron 1 of 22) L1ME3Cz|LINE|L1 6742 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr10-7831 chr10 44322278 44322488 + 5.07 0.000 Intergenic Intergenic 29633 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr7-2022 chr7 55783199 55783409 + 5.07 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -78737 NR_003949 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr17-7199 chr17 82122563 82122773 + 5.07 0.000 intron (NM_001367828, intron 16 of 16) intron (NM_001367828, intron 16 of 16) -24432 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr8-6642 chr8 78408718 78408928 + 5.07 0.000 Intergenic Intergenic -107517 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr1-15751 chr1 172255291 172255501 + 5.07 0.000 intron (NR_146559, intron 16 of 20) intron (NR_146559, intron 16 of 20) -110561 NR_103486 100628315 Hs.584880 NR_038397 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA chr18-3296 chr18 54130927 54131137 + 5.07 0.000 Intergenic LTR23|LTR|ERV1 91380 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr3-10003 chr3 100316507 100316717 + 5.07 0.000 intron (NM_001199198, intron 16 of 18) L2|LINE|L2 -18145 NM_020202 56954 Hs.439152 NM_020202 ENSG00000114021 NIT2 HEL-S-8a nitrilase family member 2 protein-coding chr2-7359 chr2 1861003 1861213 + 5.07 0.000 intron (NM_015025, intron 18 of 24) intron (NM_015025, intron 18 of 24) -116593 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr20-2015 chr20 57799736 57799946 + 5.07 0.000 Intergenic Intergenic -88305 NM_199171 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr6-8173 chr6 132587471 132587681 + 5.07 0.000 Intergenic Intergenic 2162 NM_003967 9038 Hs.248198 NM_003967 ENSG00000135569 TAAR5 PNR trace amine associated receptor 5 protein-coding chr7-7057 chr7 148627475 148627685 + 5.07 0.000 Intergenic Intergenic 36814 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr7-8868 chr7 90093770 90093980 + 5.07 0.000 intron (NR_110029, intron 2 of 2) intron (NR_110029, intron 2 of 2) -25525 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr16-4383 chr16 49742509 49742719 + 5.07 0.000 intron (NM_001271620, intron 2 of 7) intron (NM_001271620, intron 2 of 7) -78290 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr4-6477 chr4 150249879 150250089 + 5.07 0.000 intron (NM_001040260, intron 15 of 15) intron (NM_001040260, intron 15 of 15) 171539 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr1-14862 chr1 79259799 79260009 + 5.07 0.000 Intergenic Intergenic -253174 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr5-8670 chr5 140618645 140618855 + 5.07 0.000 Intergenic L1MC1|LINE|L1 14425 NM_000591 929 Hs.163867 NM_000591 ENSG00000170458 CD14 - CD14 molecule protein-coding chr11-10365 chr11 111452027 111452237 + 5.07 0.000 Intergenic Intergenic -33946 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr7-8793 chr7 82239663 82239873 + 5.07 0.000 intron (NM_000722, intron 3 of 38) intron (NM_000722, intron 3 of 38) 204009 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr19-6768 chr19 40519775 40519985 + 5.07 0.000 exon (NM_020971, exon 16 of 36) exon (NM_020971, exon 16 of 36) -10611 NM_025213 57731 Hs.32706 NM_020971 ENSG00000160460 SPTBN4 CMND|NEDHND|QV|SPNB4|SPTBN3 spectrin beta, non-erythrocytic 4 protein-coding chr5-8933 chr5 158117776 158117986 + 5.07 0.000 Intergenic Zaphod|DNA|hAT-Tip100 -258736 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr11-7952 chr11 5741520 5741730 + 5.07 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 5177 NM_001005180 387748 Hs.689609 NM_001005180 ENSG00000181023 OR56B1 OR11-65|OR56B1P olfactory receptor family 56 subfamily B member 1 protein-coding chr1-8762 chr1 952912 953122 + 5.07 0.000 intron (NM_015658, intron 9 of 18) intron (NM_015658, intron 9 of 18) 6239 NM_015658 26155 Hs.405987 NM_015658 ENSG00000188976 NOC2L NET15|NET7|NIR|PPP1R112 NOC2 like nucleolar associated transcriptional repressor protein-coding chr6-3445 chr6 147461866 147462076 + 5.07 0.000 Intergenic L1PA7|LINE|L1 -46719 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr7-6160 chr7 127599812 127600022 + 5.07 0.000 intron (NM_020369, intron 5 of 6) AluY|SINE|Alu 6181 NM_020369 29999 Hs.712692 NM_020369 ENSG00000106328 FSCN3 - fascin actin-bundling protein 3 protein-coding chr19-6292 chr19 8333838 8334048 + 5.07 0.000 exon (NM_198471, exon 5 of 11) exon (NM_198471, exon 5 of 11) 9319 NM_198471 256949 Hs.745036 NM_198471 ENSG00000186994 KANK3 ANKRD47 KN motif and ankyrin repeat domains 3 protein-coding chr19-5786 chr19 32826583 32826793 + 5.07 0.000 exon (NM_001366102, exon 32 of 33) exon (NM_001366102, exon 32 of 33) 43079 NM_001126335 11136 Hs.743345 NM_014270 ENSG00000021488 SLC7A9 BAT1|CSNU3 solute carrier family 7 member 9 protein-coding chr12-2669 chr12 49753827 49754037 + 5.07 0.000 intron (NM_001098576, intron 3 of 9) AluSz6|SINE|Alu 12123 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr11-9500 chr11 62932694 62932904 + 5.07 0.000 Intergenic AluSx3|SINE|Alu -11436 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr19-4748 chr19 28831096 28831306 + 5.07 0.000 Intergenic Intergenic -103507 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr17-6309 chr17 51321938 51322148 + 5.07 0.000 intron (NR_110751, intron 4 of 5) intron (NR_110751, intron 4 of 5) 13119 NR_110751 101927274 Hs.591168 NR_110751 ENSG00000249383 LINC02071 - long intergenic non-protein coding RNA 2071 ncRNA chr7-6936 chr7 87984295 87984505 + 5.07 0.000 intron (NM_001324421, intron 3 of 28) L1M5|LINE|L1 50149 NM_001324421 53616 Hs.256398 NM_004194 ENSG00000008277 ADAM22 ADAM 22|EIEE61|MDC2 ADAM metallopeptidase domain 22 protein-coding chr3-7539 chr3 184051732 184051942 + 5.07 0.000 Intergenic Intergenic -1210 NM_130770 170572 Hs.632579 NM_130770 ENSG00000178084 HTR3C - 5-hydroxytryptamine receptor 3C protein-coding chr5-7238 chr5 10168598 10168808 + 5.07 0.000 Intergenic Intergenic 81185 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr4-6407 chr4 123761682 123761892 + 5.07 0.000 intron (NR_027105, intron 3 of 5) MLT1D|LTR|ERVL-MaLR -12477 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr12-7018 chr12 32603887 32604097 + 5.07 0.000 intron (NM_001370297, intron 5 of 14) intron (NM_001370297, intron 5 of 14) 69699 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr14-4401 chr14 30080287 30080497 + 5.07 0.000 Intergenic AluSg4|SINE|Alu -152545 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr14-4663 chr14 55117866 55118076 + 5.07 0.000 Intergenic Intergenic -11281 NM_002306 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr6-7585 chr6 74051799 74052009 + 5.07 0.000 Intergenic L1MCc|LINE|L1 -17547 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr10-3099 chr10 21494802 21495012 + 5.07 0.000 non-coding (NR_160800, exon 2 of 2) non-coding (NR_160800, exon 2 of 2) 1734 NR_031736 100302129 NR_031736 ENSG00000222071 MIR1915 MIRN1915|hsa-mir-1915 microRNA 1915 ncRNA chr17-4175 chr17 4891321 4891531 + 5.07 0.000 intron (NM_001024937, intron 15 of 31) intron (NM_001024937, intron 15 of 31) -8110 NM_001145536 100130311 Hs.579243 NM_001145536 ENSG00000205710 C17orf107 - chromosome 17 open reading frame 107 protein-coding chr18-2939 chr18 13623006 13623216 + 5.07 0.000 intron (NM_001003675, intron 2 of 2) intron (NM_001003675, intron 2 of 2) 11347 NM_001276249 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr17-5915 chr17 74677626 74677836 + 5.07 0.000 intron (NM_175738, intron 1 of 8) intron (NM_175738, intron 1 of 8) 6600 NM_175738 326624 Hs.351413 NM_175738 ENSG00000172794 RAB37 - RAB37, member RAS oncogene family protein-coding chr8-6521 chr8 66788996 66789206 + 5.07 0.000 intron (NM_013257, intron 1 of 16) ERVL-E-int|LTR|ERVL 13896 NM_170709 23678 Hs.613417 NM_013257 ENSG00000104205 SGK3 CISK|SGK2|SGKL serum/glucocorticoid regulated kinase family member 3 protein-coding chr6-6772 chr6 3670638 3670848 + 5.07 0.000 Intergenic MER5B|DNA|hAT-Charlie 81269 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr8-3725 chr8 21716493 21716703 + 4.95 0.000 intron (NM_001495, intron 4 of 8) intron (NM_001495, intron 4 of 8) 72277 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr12-6767 chr12 7649526 7649736 + 4.95 0.000 exon (NM_001644, exon 5 of 5) exon (NM_001644, exon 5 of 5) 16277 NM_001644 339 Hs.560 NM_001644 ENSG00000111701 APOBEC1 APOBEC-1|BEDP|CDAR1|HEPR apolipoprotein B mRNA editing enzyme catalytic subunit 1 protein-coding chr10-8222 chr10 73330967 73331177 + 4.95 0.000 intron (NM_001367801, intron 9 of 27) intron (NM_001367801, intron 9 of 27) 27682 NM_001350934 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding chr18-1529 chr18 10453858 10454068 + 4.95 0.000 promoter-TSS (NM_153000) promoter-TSS (NM_153000) -672 NM_153000 147495 Hs.293274 NM_153000 ENSG00000154856 APCDD1 B7323|DRAPC1|FP7019|HHS|HTS|HYPT1 APC down-regulated 1 protein-coding chr15-4632 chr15 62985984 62986194 + 4.95 0.000 Intergenic Intergenic -56658 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr19-6284 chr19 7987211 7987421 + 4.95 0.000 intron (NM_001419, intron 2 of 5) intron (NM_001419, intron 2 of 5) 18325 NM_001419 1994 Hs.184492 NM_001419 ENSG00000066044 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding chr11-8150 chr11 59560219 59560429 + 4.95 0.000 Intergenic Intergenic 34834 NR_036120 100422880 NR_036120 ENSG00000264559 MIR3162 mir-3162 microRNA 3162 ncRNA chr12-6438 chr12 88419205 88419415 + 4.95 0.000 Intergenic L2a|LINE|L2 161161 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr5-7753 chr5 60774018 60774228 + 4.95 0.000 intron (NM_024930, intron 3 of 8) L1PA17|LINE|L1 70146 NM_024930 79993 Hs.274256 NM_024930 ENSG00000164181 ELOVL7 - ELOVL fatty acid elongase 7 protein-coding chr10-7985 chr10 60025784 60025994 + 4.95 0.000 TTS (NM_020987) TTS (NM_020987) -64976 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr3-9278 chr3 41840202 41840412 + 4.95 0.000 intron (NR_136342, intron 16 of 34) AluJb|SINE|Alu 121796 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr10-4406 chr10 60036234 60036444 + 4.95 0.000 intron (NM_001204403, intron 43 of 43) intron (NM_001204403, intron 43 of 43) -75426 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr12-8003 chr12 112147534 112147744 + 4.95 0.000 intron (NM_006700, intron 7 of 11) intron (NM_006700, intron 7 of 11) 15682 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr1-15213 chr1 110557572 110557782 + 4.95 0.000 Intergenic LTR16|LTR|ERVL -38502 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr5-8936 chr5 158170708 158170918 + 4.95 0.000 Intergenic Intergenic 238960 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr11-10397 chr11 113684483 113684693 + 4.95 0.000 Intergenic Intergenic 21720 NM_001288752 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding chr10-4159 chr10 88460822 88461032 + 4.95 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 122391 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr8-6953 chr8 105474975 105475185 + 4.95 0.000 intron (NM_001362837, intron 3 of 7) intron (NM_001362837, intron 3 of 7) 155537 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr19-5065 chr19 50548757 50548967 + 4.95 0.000 5' UTR (NM_001348568, exon 2 of 3) 5' UTR (NM_001348568, exon 2 of 3) 2180 NM_001348568 94030 Hs.120873 NM_001080457 ENSG00000131409 LRRC4B HSM|LRIG4|NGL-3 leucine rich repeat containing 4B protein-coding chr2-5528 chr2 156368825 156369035 + 4.95 0.000 Intergenic SVA_E|Retroposon|SVA -26810 NR_147695 440918 Hs.641142 NR_147695 FLJ46875 - uncharacterized LOC440918 ncRNA chr9-8180 chr9 106419404 106419614 + 4.95 0.000 Intergenic L2a|LINE|L2 -181419 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr9-7243 chr9 3441851 3442061 + 4.95 0.000 intron (NM_001282116, intron 1 of 16) AluSq2|SINE|Alu -46360 NM_002919 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr12-3580 chr12 46102777 46102987 + 4.95 0.000 Intergenic AluY|SINE|Alu -112308 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr1-11619 chr1 234282541 234282751 + 4.95 0.000 intron (NM_173508, intron 3 of 7) intron (NM_173508, intron 3 of 7) -23821 NR_039818 100616380 NR_039818 ENSG00000264377 MIR4671 - microRNA 4671 ncRNA chr2-12991 chr2 105943915 105944125 + 4.95 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 92173 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr18-3035 chr18 27493362 27493572 + 4.95 0.000 Intergenic LTR16E1|LTR|ERVL -150811 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr6-3744 chr6 8367636 8367846 + 4.95 0.000 Intergenic L2c|LINE|L2 67804 NM_001370478 51000 Hs.285847 NM_015948 ENSG00000124786 SLC35B3 C6orf196|CGI-19|PAPST2 solute carrier family 35 member B3 protein-coding chr20-2639 chr20 43488001 43488211 + 4.95 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -19591 NM_032107 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chr15-5249 chr15 98398969 98399179 + 4.95 0.000 intron (NR_146567, intron 1 of 2) intron (NR_146567, intron 1 of 2) 21924 NR_146567 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chr12-5809 chr12 24291508 24291718 + 4.95 0.000 intron (NM_152989, intron 3 of 17) intron (NM_152989, intron 3 of 17) 68342 NR_120472 101928471 Hs.569156 NR_120472 ENSG00000256120 SOX5-AS1 - SOX5 antisense RNA 1 ncRNA chr4-8310 chr4 144415649 144415859 + 4.95 0.000 Intergenic Intergenic 230265 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA chr18-3389 chr18 60421392 60421602 + 4.95 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -48722 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr8-5943 chr8 19518241 19518451 + 4.95 0.000 intron (NM_001354497, intron 1 of 7) LTR9|LTR|ERV1 84199 NM_001354494 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr2-10972 chr2 94976933 94977143 + 4.95 0.000 Intergenic Intergenic -29696 NR_037597 442028 Hs.611545 NR_037597 ENSG00000259848 LOC442028 - uncharacterized LOC442028 ncRNA chr4-8604 chr4 171014089 171014299 + 4.95 0.000 Intergenic Intergenic -26408 NR_038838 100506122 Hs.434205 NR_038838 ENSG00000248872 LINC02431 - long intergenic non-protein coding RNA 2431 ncRNA chr22-2402 chr22 16913831 16914041 + 4.95 0.000 Intergenic Intergenic 86462 NR_003607 27437 Hs.143955 NR_003607 ENSG00000229027 HSFY1P1 CECR8|HSFYL1|HSFYP1|NCRNA00016 HSFY1 pseudogene 1 pseudo chr10-7234 chr10 122898071 122898281 + 4.95 0.000 non-coding (NR_027282, exon 6 of 6) non-coding (NR_027282, exon 6 of 6) -12434 NM_001029888 118670 Hs.369829 NM_001029888 ENSG00000203795 FAM24A - family with sequence similarity 24 member A protein-coding chr9-7069 chr9 126068699 126068909 + 4.95 0.000 Intergenic MIRb|SINE|MIR 207111 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr3-7089 chr3 179286384 179286594 + 4.95 0.000 Intergenic Intergenic -19439 NM_171828 27094 Hs.591285 NM_014407 ENSG00000171121 KCNMB3 BKBETA3|HBETA3|K(VCA)BETA-3|KCNMB2|KCNMBL|SLO-BETA-3|SLOBETA3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 protein-coding chr2-13667 chr2 162735222 162735432 + 4.95 0.000 intron (NM_033272, intron 2 of 15) LTR8B|LTR|ERV1 -33609 NR_110258 101929570 Hs.470445 NR_110258 ENSG00000237750 LOC101929570 - uncharacterized LOC101929570 ncRNA chr10-5426 chr10 77537746 77537956 + 4.95 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 99957 NM_001271520 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr6-7596 chr6 75914962 75915172 + 4.95 0.000 non-coding (NR_160538, exon 33 of 33) non-coding (NR_160538, exon 33 of 33) 157595 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr10-5915 chr10 119535148 119535358 + 4.95 0.000 intron (NM_001005339, intron 1 of 4) intron (NM_001005339, intron 1 of 4) 1280 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr3-7933 chr3 152443371 152443581 + 4.95 0.000 intron (NM_207296, intron 3 of 7) intron (NM_207296, intron 3 of 7) -102486 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr1-10628 chr1 179813109 179813319 + 4.95 0.000 intron (NM_001329719, intron 4 of 4) intron (NM_001329719, intron 4 of 4) 9290 NR_162130 113219451 NR_162130 MIR12116 - microRNA 12116 ncRNA chr4-5655 chr4 9815075 9815285 + 4.95 0.000 Intergenic Intergenic 33546 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr22-3246 chr22 43643270 43643480 + 4.95 0.000 intron (NM_198856, intron 15 of 29) MIR3|SINE|MIR 127121 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr15-2719 chr15 93324433 93324643 + 4.95 0.000 Intergenic Intergenic 118472 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr2-13762 chr2 170740483 170740693 + 4.95 0.000 intron (NR_110185, intron 1 of 5) intron (NR_110185, intron 1 of 5) 25251 NM_001003845 389058 Hs.368802 NM_001003845 ENSG00000204335 SP5 - Sp5 transcription factor protein-coding chr6-8051 chr6 120966092 120966302 + 4.95 0.000 Intergenic LTR8B|LTR|ERV1 368283 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chrX-5050 chrX 123411329 123411539 + 4.95 0.000 intron (NM_007325, intron 10 of 15) intron (NM_007325, intron 10 of 15) 227156 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chrX-4448 chrX 55646662 55646872 + 4.95 0.000 Intergenic Intergenic 23367 NM_198451 139628 Hs.364260 NM_198451 ENSG00000189299 FOXR2 FOXN6 forkhead box R2 protein-coding chr3-10583 chr3 142484520 142484730 + 4.95 0.000 intron (NM_001354579, intron 35 of 45) MER21A|LTR|ERVL -36563 NM_001282859 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr17-8300 chr17 69593084 69593294 + 4.95 0.000 promoter-TSS (NR_109971) promoter-TSS (NR_109971) -798 NR_109972 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr10-7285 chr10 130494400 130494610 + 4.95 0.000 Intergenic (TGTG)n|Simple_repeat|Simple_repeat 358096 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr6-8594 chr6 166713573 166713783 + 4.95 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -86427 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr6-5739 chr6 151513917 151514127 + 4.95 0.000 intron (NM_025059, intron 1 of 10) intron (NM_025059, intron 1 of 10) 20005 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chr10-7622 chr10 22320813 22321023 + 4.95 0.000 promoter-TSS (NM_005180) promoter-TSS (NM_005180) -181 NM_005180 648 Hs.380403 NM_005180 ENSG00000168283 BMI1 FLVI2/BMI1|PCGF4|RNF51|flvi-2/bmi-1 BMI1 proto-oncogene, polycomb ring finger protein-coding chr9-8412 chr9 120411499 120411709 + 4.95 0.000 intron (NR_073558, intron 28 of 37) intron (NR_073558, intron 28 of 37) -166554 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr1-13581 chr1 8555209 8555419 + 4.95 0.000 intron (NM_001042681, intron 6 of 22) MER58B|DNA|hAT-Charlie -60401 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr4-5184 chr4 158510595 158510805 + 4.95 0.000 Intergenic Intergenic -11014 NM_001363776 59350 Hs.591686 NM_021634 ENSG00000171509 RXFP1 LGR7|RXFPR1 relaxin family peptide receptor 1 protein-coding chr4-4072 chr4 3538467 3538677 + 4.95 0.000 Intergenic SVA_D|Retroposon|SVA -6150 NM_002337 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr12-4448 chr12 11878779 11878989 + 4.95 0.000 intron (NM_001987, intron 5 of 7) intron (NM_001987, intron 5 of 7) -170977 NM_001370269 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr15-5064 chr15 85503028 85503238 + 4.95 0.000 intron (NM_007200, intron 2 of 36) MIR|SINE|MIR -116817 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr9-5611 chr9 117034971 117035181 + 4.95 0.000 intron (NM_014010, intron 5 of 21) intron (NM_014010, intron 5 of 21) 146125 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr13-4452 chr13 112647240 112647450 + 4.95 0.000 5' UTR (NM_207440, exon 1 of 3) 5' UTR (NM_207440, exon 1 of 3) 301 NM_207440 400165 Hs.591213 NM_207440 ATP11AUN C13orf35|SMABLO1 ATP11A upstream neighbor protein-coding chr11-9926 chr11 75649967 75650177 + 4.95 0.000 intron (NM_207577, intron 1 of 2) intron (NM_207577, intron 1 of 2) 18362 NM_033063 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr4-7828 chr4 100617137 100617347 + 4.95 0.000 Intergenic MLT1B-int|LTR|ERVL-MaLR 57871 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA chrX-3707 chrX 113136104 113136314 + 4.95 0.000 intron (NR_110399, intron 3 of 3) intron (NR_110399, intron 3 of 3) 93482 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr14-5232 chr14 98541086 98541296 + 4.95 0.000 Intergenic L1MB1|LINE|L1 -170422 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr16-5951 chr16 4123455 4123665 + 4.95 0.000 Intergenic HAL1|LINE|L1 -7118 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr11-2606 chr11 133915169 133915379 + 4.95 0.000 intron (NM_001277285, intron 18 of 19) AluJb|SINE|Alu -13534 NR_024344 283174 Hs.504370 NM_001001873 ENSG00000280237 MIR4697HG LINC00947 MIR4697 host gene ncRNA chr15-2272 chr15 51453043 51453253 + 4.95 0.000 intron (NM_001174116, intron 40 of 42) L1PB2|LINE|L1 75902 NM_001330297 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr2-12858 chr2 96682862 96683072 + 4.95 0.000 intron (NM_001293083, intron 19 of 52) L1MB8|LINE|L1 40203 NM_001293083 90342 Hs.534025 NM_001077400 ENSG00000249715 FER1L5 - fer-1 like family member 5 protein-coding chr2-14585 chr2 232247163 232247373 + 4.95 0.000 intron (NR_046477, intron 10 of 18) intron (NR_046477, intron 10 of 18) 74615 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr11-10339 chr11 110176643 110176853 + 4.95 0.000 intron (NM_001260493, intron 15 of 15) intron (NM_001260493, intron 15 of 15) 83356 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr6-7391 chr6 50632974 50633184 + 4.95 0.000 Intergenic L1PA5|LINE|L1 -80465 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr18-2934 chr18 13456118 13456328 + 4.95 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -3724 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr20-3863 chr20 26153654 26153864 + 4.95 0.000 Intergenic AluSp|SINE|Alu -39718 NR_003678 149934 Hs.711274 NM_001039379 ENSG00000240108 NCOR1P1 C20orf191|bB329D4.2 nuclear receptor corepressor 1 pseudogene 1 pseudo chr9-6575 chr9 123679476 123679686 + 4.95 0.000 intron (NM_001352968, intron 4 of 18) intron (NM_001352968, intron 4 of 18) -193959 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr8-5273 chr8 139491875 139492085 + 4.95 0.000 Intergenic LTR16A1|LTR|ERVL 211143 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chrX-2194 chrX 40248973 40249183 + 4.95 0.000 Intergenic Intergenic -13839 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr17-7760 chr17 34847035 34847245 + 4.95 0.000 Intergenic Intergenic 114320 NM_006584 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr8-6639 chr8 78220093 78220303 + 4.95 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -296142 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr13-3632 chr13 30907305 30907515 + 4.95 0.000 intron (NM_032849, intron 1 of 4) intron (NM_032849, intron 1 of 4) 1139 NM_032849 84935 Hs.147880 NM_032849 ENSG00000102802 MEDAG AWMS3|C13orf33|MEDA-4|MEDA4|hAWMS3 mesenteric estrogen dependent adipogenesis protein-coding chr3-10726 chr3 154934004 154934214 + 4.95 0.000 Intergenic LTR88b|LTR|Gypsy? -90015 NM_001354642 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr9-3461 chr9 3517415 3517625 + 4.95 0.000 intron (NM_134428, intron 1 of 17) intron (NM_134428, intron 1 of 17) 8481 NM_001282116 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr7-9595 chr7 148513615 148513825 + 4.95 0.000 Intergenic Intergenic -77046 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr16-6504 chr16 59865579 59865789 + 4.95 0.000 intron (NR_110917, intron 1 of 3) AluSx1|SINE|Alu 10331 NR_110917 101927580 Hs.552235 NR_110917 ENSG00000261807 LINC02141 - long intergenic non-protein coding RNA 2141 ncRNA chr20-2908 chr20 63672254 63672464 + 4.95 0.000 intron (NR_037882, intron 8 of 37) intron (NR_037882, intron 8 of 37) 14549 NR_037882 100533107 Hs.745057 NR_037882 ENSG00000026036 RTEL1-TNFRSF6B - RTEL1-TNFRSF6B readthrough (NMD candidate) ncRNA chrX-2785 chrX 132085437 132085647 + 4.95 0.000 intron (NM_194277, intron 7 of 11) intron (NM_194277, intron 7 of 11) 42478 NM_001306193 90167 Hs.170776 NM_194277 ENSG00000165694 FRMD7 NYS|NYS1|XIPAN FERM domain containing 7 protein-coding chr14-3029 chr14 56495251 56495461 + 4.95 0.000 Intergenic Intergenic -18975 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr19-3385 chr19 13326682 13326892 + 4.95 0.000 intron (NM_023035, intron 10 of 46) AluJr|SINE|Alu 176376 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr20-3413 chr20 41848410 41848620 + 4.95 0.000 Intergenic FRAM|SINE|Alu -230138 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr7-8423 chr7 46559139 46559349 + 4.95 0.000 Intergenic Intergenic 137878 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr19-6579 chr19 21635001 21635211 + 4.95 0.000 Intergenic Intergenic -14562 NR_144514 400682 Hs.568075 NR_144514 LOC400682 - zinc finger protein 100-like pseudo chr11-8700 chr11 5755432 5755642 + 4.95 0.000 exon (NM_001005175, exon 1 of 1) exon (NM_001005175, exon 1 of 1) 844 NM_001005175 390072 Hs.553735 NM_001005175 ENSG00000181074 OR52N4 OR11-64 olfactory receptor family 52 subfamily N member 4 (gene/pseudogene) protein-coding chr10-7947 chr10 53968089 53968299 + 4.95 0.000 intron (NM_001354411, intron 22 of 34) L1PA5|LINE|L1 -518036 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr9-7976 chr9 92551034 92551244 + 4.95 0.000 intron (NM_001286969, intron 4 of 6) intron (NM_001286969, intron 4 of 6) -15047 NM_001197295 1842 Hs.117060 NM_001393 ENSG00000106823 ECM2 - extracellular matrix protein 2 protein-coding chrX-4947 chrX 111926283 111926493 + 4.95 0.000 intron (NM_012471, intron 2 of 10) MER3|DNA|hAT-Charlie 44491 NM_001195577 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr12-8335 chr12 131092447 131092657 + 4.95 0.000 intron (NM_198827, intron 15 of 24) intron (NM_198827, intron 15 of 24) -72459 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA chr2-11769 chr2 12682262 12682472 + 4.95 0.000 Intergenic Intergenic -34505 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr5-8574 chr5 137345646 137345856 + 4.95 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 153575 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr1-7698 chr1 22675608 22675818 + 4.95 0.000 Intergenic Intergenic 22477 NM_000491 713 Hs.8986 NM_000491 ENSG00000173369 C1QB - complement C1q B chain protein-coding chr3-9676 chr3 63331834 63332044 + 4.95 0.000 intron (NM_001130003, intron 2 of 5) intron (NM_001130003, intron 2 of 5) 53631 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chrX-5270 chrX 139700934 139701144 + 4.95 0.000 intron (NM_001099855, intron 1 of 27) HAL1|LINE|L1 7128 NM_001171876 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr7-8797 chr7 82620441 82620651 + 4.95 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -176590 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr10-7045 chr10 81528422 81528632 + 4.95 0.000 Intergenic PABL_B-int|LTR|ERV1 -346667 NM_001370083 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr18-1454 chr18 44742710 44742920 + 4.95 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 61927 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr3-10875 chr3 169360087 169360297 + 4.95 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -87675 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr10-8812 chr10 108415374 108415584 + 4.95 0.000 Intergenic Intergenic -346186 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr11-10348 chr11 110857906 110858116 + 4.95 0.000 Intergenic Intergenic -144822 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr16-6402 chr16 54558334 54558544 + 4.95 0.000 Intergenic AluJr|SINE|Alu -187740 NR_134923 100996345 Hs.112680 NR_134922 ENSG00000261803 LINC02140 - long intergenic non-protein coding RNA 2140 ncRNA chrX-1653 chrX 138994807 138995017 + 4.95 0.000 intron (NM_001139501, intron 2 of 7) L1M1|LINE|L1 -127357 NM_001139502 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2|LINC00889 fibroblast growth factor 13 protein-coding chr12-8169 chr12 121569256 121569466 + 4.95 0.000 intron (NM_001005366, intron 4 of 22) MLT1K|LTR|ERVL-MaLR 10885 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chrX-4701 chrX 86643979 86644189 + 4.95 0.000 intron (NM_001139515, intron 3 of 11) L1PA14|LINE|L1 381116 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr11-6096 chr11 34516627 34516837 + 4.95 0.000 Intergenic MIRb|SINE|MIR -2938 NM_001243080 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr15-3820 chr15 76574126 76574336 + 4.95 0.000 exon (NM_001145923, exon 23 of 32) exon (NM_001145923, exon 23 of 32) -12416 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr8-7098 chr8 118322196 118322406 + 4.95 0.000 intron (NM_001101676, intron 4 of 4) L2b|LINE|L2 -210482 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr1-7637 chr1 5189731 5189941 + 4.95 0.000 Intergenic Intergenic 535227 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr7-6784 chr7 24653760 24653970 + 4.95 0.000 intron (NM_016447, intron 6 of 12) intron (NM_016447, intron 6 of 12) 80413 NM_016447 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr8-4698 chr8 140406483 140406693 + 4.95 0.000 intron (NM_001321646, intron 4 of 21) L4_A_Mam|LINE|RTE-X 51156 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr2-10788 chr2 44052862 44053072 + 4.95 0.000 Intergenic Intergenic -56978 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr7-9564 chr7 142018137 142018347 + 4.95 0.000 intron (NM_004668, intron 3 of 47) MLT1F2|LTR|ERVL-MaLR 22363 NM_004668 8972 Hs.122785 NM_004668 ENSG00000257335 MGAM MG|MGA maltase-glucoamylase protein-coding chr13-4173 chr13 88594691 88594901 + 4.95 0.000 Intergenic MER52D|LTR|ERV1 -32057 NR_047490 100861553 Hs.560132 NR_047490 ENSG00000261666 LINC00560 - long intergenic non-protein coding RNA 560 ncRNA chr7-8870 chr7 90149811 90150021 + 4.95 0.000 intron (NR_110029, intron 2 of 2) intron (NR_110029, intron 2 of 2) -4553 NM_012449 26872 Hs.61635 NM_012449 ENSG00000164647 STEAP1 PRSS24|STEAP STEAP family member 1 protein-coding chr5-7831 chr5 68191123 68191333 + 4.95 0.000 intron (NR_105003, intron 1 of 2) intron (NR_105003, intron 1 of 2) 1352 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr14-4718 chr14 59800450 59800660 + 4.95 0.000 intron (NM_021136, intron 1 of 8) AluYj4|SINE|Alu 70221 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr14-2475 chr14 94867175 94867385 + 4.95 0.000 Intergenic Intergenic 96638 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr9-6189 chr9 90234035 90234245 + 4.95 0.000 Intergenic AluSp|SINE|Alu -192641 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr1-14503 chr1 50086633 50086843 + 4.95 0.000 intron (NM_001324208, intron 1 of 6) intron (NM_001324208, intron 1 of 6) -17171 NM_001144776 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding chr12-7381 chr12 56995144 56995354 + 4.95 0.000 exon (NM_007264, exon 2 of 2) exon (NM_007264, exon 2 of 2) 757 NM_007264 11318 Hs.483909 NM_007264 ENSG00000166856 GPR182 7TMR|ADMR|AM-R|AMR|G10D|L1-R|gamrh|hrhAMR G protein-coupled receptor 182 protein-coding chr11-9024 chr11 25897709 25897919 + 4.95 0.000 Intergenic Intergenic -291309 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr2-9764 chr2 99533607 99533817 + 4.95 0.000 Intergenic HAL1ME|LINE|L1 -43695 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr12-3699 chr12 3141365 3141575 + 4.95 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 64091 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr13-4140 chr13 83761901 83762111 + 4.95 0.000 Intergenic Intergenic 120387 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr17-7002 chr17 51380900 51381110 + 4.95 0.000 Intergenic Intergenic 44290 NR_122104 440446 Hs.626751 NR_122104 ENSG00000267452 LINC02072 - long intergenic non-protein coding RNA 2072 ncRNA chr10-7450 chr10 7324445 7324655 + 4.95 0.000 intron (NM_001029880, intron 4 of 20) intron (NM_001029880, intron 4 of 20) 84791 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr12-7463 chr12 63989577 63989787 + 4.95 0.000 intron (NM_001346201, intron 2 of 21) AmnSINE2|SINE|tRNA-Deu 144982 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr8-6600 chr8 73401548 73401758 + 4.95 0.000 Intergenic L1PA13|LINE|L1 -18421 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA chr1-4882 chr1 34133971 34134181 + 4.95 0.000 intron (NM_052896, intron 1 of 69) AluSc|SINE|Alu 31198 NM_001281956 114784 Hs.656915 NM_052896 ENSG00000121904 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding chr1-11699 chr1 8083050 8083260 + 4.95 0.000 Intergenic Intergenic -56846 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr7-6525 chr7 34330184 34330394 + 4.95 0.000 Intergenic Intergenic -327929 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chrX-4829 chrX 102651474 102651684 + 4.95 0.000 promoter-TSS (NM_014710) promoter-TSS (NM_014710) 96 NM_001184727 9737 Hs.729265 NM_014710 ENSG00000198932 GPRASP1 GASP|GASP-1|GASP1 G protein-coupled receptor associated sorting protein 1 protein-coding chr3-9743 chr3 68860972 68861182 + 4.95 0.000 intron (NM_001005527, intron 3 of 5) L1M5|LINE|L1 71470 NM_182522 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr15-5275 chr15 99426092 99426302 + 4.95 0.000 Intergenic Intergenic -139220 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr8-7355 chr8 135730079 135730289 + 4.95 0.000 Intergenic Intergenic 272728 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr8-6191 chr8 34658857 34659067 + 4.95 0.000 Intergenic L1MA5|LINE|L1 -124959 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr17-7574 chr17 20125690 20125900 + 4.95 0.000 intron (NM_001033553, intron 3 of 14) L1MB3|LINE|L1 -30277 NM_001033555 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr12-7384 chr12 57160070 57160280 + 4.95 0.000 intron (NM_002332, intron 12 of 88) L2a|LINE|L2 -12556 NR_131939 105751187 Hs.609540 NR_131938 ENSG00000259125 LRP1-AS - LRP1 antisense RNA ncRNA chr4-6572 chr4 186819846 186820056 + 4.95 0.000 Intergenic MER58A|DNA|hAT-Charlie -96095 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr17-7100 chr17 72358555 72358765 + 4.95 0.000 Intergenic Intergenic 15849 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr17-5617 chr17 48997673 48997883 + 4.95 0.000 exon (NM_006546, exon 1 of 15) exon (NM_006546, exon 1 of 15) 393 NM_001160423 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chr8-4802 chr8 4444211 4444421 + 4.95 0.000 intron (NM_033225, intron 2 of 69) AluSz|SINE|Alu 550598 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr5-7752 chr5 60763114 60763324 + 4.95 0.000 intron (NM_024930, intron 7 of 8) intron (NM_024930, intron 7 of 8) -63053 NM_001145208 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr5-2562 chr5 8040928 8041138 + 4.95 0.000 Intergenic L1PA15|LINE|L1 171885 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr19-6435 chr19 15626984 15627194 + 4.95 0.000 intron (NM_007253, intron 9 of 12) L1ME5|LINE|L1 11871 NM_007253 11283 Hs.268554 NM_007253 ENSG00000186526 CYP4F8 CPF8|CYPIVF8 cytochrome P450 family 4 subfamily F member 8 protein-coding chr1-15869 chr1 182330351 182330561 + 4.95 0.000 Intergenic Intergenic -16395 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr16-6345 chr16 50314434 50314644 + 4.95 0.000 intron (NM_001114, intron 24 of 25) intron (NM_001114, intron 24 of 25) 21923 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chr19-3692 chr19 18385965 18386175 + 4.95 0.000 promoter-TSS (NR_036156) promoter-TSS (NR_036156) -88 NM_004864 9518 Hs.616962 NM_004864 ENSG00000130513 GDF15 GDF-15|MIC-1|MIC1|NAG-1|PDF|PLAB|PTGFB growth differentiation factor 15 protein-coding chr4-7326 chr4 56035686 56035896 + 4.95 0.000 Intergenic L2|LINE|L2 86846 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr1-12604 chr1 35845233 35845443 + 4.95 0.000 intron (NR_146062, intron 15 of 19) AluSq|SINE|Alu -24470 NM_001317123 26523 Hs.22867 NM_012199 ENSG00000092847 AGO1 EIF2C|EIF2C1|GERP95|Q99|hAgo1 argonaute RISC component 1 protein-coding chr20-4302 chr20 51075451 51075661 + 4.95 0.000 Intergenic L2b|LINE|L2 -52449 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr19-6665 chr19 33983190 33983400 + 4.95 0.000 Intergenic L1MDa|LINE|L1 186425 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr6-8219 chr6 135834048 135834258 + 4.95 0.000 Intergenic Intergenic -17548 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr1-13794 chr1 18481235 18481445 + 4.95 0.000 exon (NM_152375, exon 1 of 1) exon (NM_152375, exon 1 of 1) 410 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr10-8142 chr10 70552133 70552343 + 4.95 0.000 intron (NM_014431, intron 18 of 19) intron (NM_014431, intron 18 of 19) 50503 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr7-6658 chr7 134404271 134404481 + 4.95 0.000 Intergenic AluJr|SINE|Alu 54724 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr4-3824 chr4 119843377 119843587 + 4.95 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -38967 NR_110660 101927007 Hs.143958 NR_110660 ENSG00000250772 LINC01365 - long intergenic non-protein coding RNA 1365 ncRNA chr18-1517 chr18 7451482 7451692 + 4.95 0.000 Intergenic MamGypLTR2c|LTR|Gypsy 9419 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr22-3873 chr22 34328427 34328637 + 4.95 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -405644 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr20-2186 chr20 49627302 49627512 + 4.95 0.000 Intergenic Intergenic -59270 NM_000961 5740 Hs.302085 NM_000961 ENSG00000124212 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 synthase protein-coding chr7-7494 chr7 100633150 100633360 + 4.95 0.000 exon (NM_001206855, exon 2 of 15) exon (NM_001206855, exon 2 of 15) 395 NM_001206855 7036 Hs.544932 NM_003227 ENSG00000106327 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding chr3-10159 chr3 115891200 115891410 + 4.95 0.000 intron (NM_001318915, intron 3 of 8) MLT1H2|LTR|ERVL-MaLR 13821 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr2-13307 chr2 130294007 130294217 + 4.95 0.000 Intergenic Intergenic 47996 NM_001321119 84317 Hs.104203 NM_032357 ENSG00000136710 CCDC115 CDG2O|ccp1 coiled-coil domain containing 115 protein-coding chr8-7280 chr8 130621626 130621836 + 4.95 0.000 Intergenic L1M1|LINE|L1 -178057 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr1-14816 chr1 72704853 72705063 + 4.95 0.000 Intergenic LTR16A|LTR|ERVL -422419 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr6-8397 chr6 150446127 150446337 + 4.95 0.000 Intergenic L2|LINE|L2 77220 NR_134655 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chrX-1458 chrX 98543493 98543703 + 4.95 0.000 Intergenic Intergenic -979063 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr11-7712 chr11 71482379 71482589 + 4.95 0.000 intron (NM_018161, intron 13 of 20) intron (NM_018161, intron 13 of 20) 8981 NR_106812 102466728 NR_106812 ENSG00000278349 MIR6754 hsa-mir-6754 microRNA 6754 ncRNA chr1-11401 chr1 52786760 52786970 + 4.95 0.000 intron (NM_024646, intron 5 of 13) AluSp|SINE|Alu -55895 NM_001307931 440590 Hs.658458 NM_001004339 ENSG00000203995 ZYG11A ZYG11 zyg-11 family member A, cell cycle regulator protein-coding chr1-15242 chr1 112238734 112238944 + 4.95 0.000 Intergenic L2a|LINE|L2 -157375 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr11-7597 chr11 42529468 42529678 + 4.95 0.000 Intergenic Intergenic -275883 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr4-7354 chr4 57501871 57502081 + 4.95 0.000 Intergenic Intergenic 76104 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr8-6939 chr8 104280458 104280668 + 4.95 0.000 Intergenic Intergenic 57228 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr1-16578 chr1 235818770 235818980 + 4.95 0.000 intron (NM_000081, intron 3 of 52) intron (NM_000081, intron 3 of 52) 34185 NR_031718 100302139 NR_031718 ENSG00000222831 MIR1537 MIRN1537|hsa-mir-1537|mir-1537 microRNA 1537 ncRNA chrX-3816 chrX 144219224 144219434 + 4.95 0.000 Intergenic L1M1|LINE|L1 335258 NR_121210 389898 Hs.585177 NM_001012989 ENSG00000276380 UBE2NL Li174 ubiquitin conjugating enzyme E2 N like (gene/pseudogene) protein-coding chr7-4968 chr7 150112111 150112321 + 4.95 0.000 intron (NM_001351028, intron 6 of 9) intron (NM_001351028, intron 6 of 9) -64501 NR_147020 653857 Hs.664579 NM_001164458 ENSG00000106526 ACTR3C ARP11 actin related protein 3C protein-coding chr1-16316 chr1 216859982 216860192 + 4.95 0.000 intron (NM_001350122, intron 3 of 9) AluSz|SINE|Alu -54702 NM_001243514 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr14-4341 chr14 23130172 23130382 + 4.95 0.000 intron (NM_001267037, intron 5 of 7) intron (NM_001267037, intron 5 of 7) -10666 NM_001805 1053 Hs.558308 NM_001805 ENSG00000092067 CEBPE C/EBP-epsilon|CRP1 CCAAT enhancer binding protein epsilon protein-coding chr10-8467 chr10 88189638 88189848 + 4.95 0.000 Intergenic Intergenic 326118 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr5-8316 chr5 116890727 116890937 + 4.95 0.000 Intergenic Intergenic -128623 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr3-7283 chr3 197995027 197995237 + 4.95 0.000 intron (NR_026786, intron 9 of 16) Tigger2a|DNA|TcMar-Tigger 34915 NR_026786 89782 Hs.518540 NM_033029 ENSG00000185621 LMLN GP63|INV|IX14|LMNL1|MSP leishmanolysin like peptidase protein-coding chr5-4652 chr5 36034024 36034234 + 4.95 0.000 TTS (NM_174914) TTS (NM_174914) 32753 NM_174914 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr19-5782 chr19 32601308 32601518 + 4.95 0.000 intron (NM_032139, intron 26 of 28) AluY|SINE|Alu 7056 NR_145718 109616972 NR_145718 ENSG00000201388 SNORA68B - small nucleolar RNA, H/ACA box 68B snoRNA chr2-10703 chr2 26870744 26870954 + 4.95 0.000 intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 22425 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr9-6494 chr9 97497849 97498059 + 4.95 0.000 Intergenic SVA_B|Retroposon|SVA -3226 NM_001166116 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr1-16374 chr1 221593836 221594046 + 4.95 0.000 Intergenic MIR|SINE|MIR 142959 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr12-5769 chr12 3988778 3988988 + 4.95 0.000 Intergenic Intergenic -115435 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr2-12166 chr2 39187334 39187544 + 4.95 0.000 intron (NM_001009565, intron 6 of 7) AluJb|SINE|Alu 42149 NM_001346911 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr3-9154 chr3 32821680 32821890 + 4.95 0.000 intron (NM_001039111, intron 1 of 3) CpG 3788 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr7-8825 chr7 85222548 85222758 + 4.95 0.000 Intergenic Intergenic -100722 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr2-13872 chr2 178884805 178885015 + 4.95 0.000 exon (NM_173648, exon 11 of 24) exon (NM_173648, exon 11 of 24) -77487 NM_001256850 7273 Hs.134602 NM_003319 ENSG00000155657 TTN CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|LGMDR10|MYLK5|SALMY|TMD titin protein-coding chr6-8568 chr6 163604929 163605139 + 4.95 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 66450 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr10-3586 chr10 86888090 86888300 + 4.95 0.000 intron (NM_004329, intron 3 of 12) AluSx1|SINE|Alu -67564 NM_001330120 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chrX-2803 chrX 134331105 134331315 + 4.95 0.000 Intergenic AluSc8|SINE|Alu -42102 NM_001015877 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr22-3364 chr22 28843525 28843735 + 4.95 0.000 Intergenic AluSx|SINE|Alu -39942 NM_001206998 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr12-5353 chr12 117455012 117455222 + 4.95 0.000 3' UTR (NM_173598, exon 20 of 20) 3' UTR (NM_173598, exon 20 of 20) -93315 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr6-7613 chr6 77403464 77403674 + 4.95 0.000 Intergenic Intergenic 60453 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr22-3146 chr22 25206889 25207099 + 4.95 0.000 intron (NM_004076, intron 5 of 5) intron (NM_004076, intron 5 of 5) 7136 NM_004076 1417 Hs.533022 NM_004076 ENSG00000100053 CRYBB3 CATCN2|CRYB3|CTRCT22 crystallin beta B3 protein-coding chr14-4044 chr14 54940655 54940865 + 4.95 0.000 3' UTR (NM_001008396, exon 25 of 25) 3' UTR (NM_001008396, exon 25 of 25) -37934 NM_001024071 2643 Hs.86724 NM_000161 ENSG00000131979 GCH1 DYT14|DYT5|DYT5a|GCH|GTP-CH-1|GTPCH1|HPABH4B GTP cyclohydrolase 1 protein-coding chr2-8585 chr2 137914119 137914329 + 4.95 0.000 intron (NR_120402, intron 2 of 2) intron (NR_120402, intron 2 of 2) 13708 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr3-10819 chr3 163169794 163170004 + 4.95 0.000 Intergenic L1P2|LINE|L1 133402 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr10-8821 chr10 109084692 109084902 + 4.95 0.000 Intergenic L1PB|LINE|L1 838449 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr19-6970 chr19 48300123 48300333 + 4.95 0.000 intron (NM_144577, intron 10 of 13) AluSq|SINE|Alu 19271 NM_144577 93233 Hs.112645 NM_144577 ENSG00000105479 CCDC114 CILD20 coiled-coil domain containing 114 protein-coding chr3-8676 chr3 181875933 181876143 + 4.95 0.000 Intergenic Intergenic -76326 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr4-7111 chr4 34889600 34889810 + 4.95 0.000 Intergenic Intergenic -619958 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr4-8556 chr4 165804888 165805098 + 4.95 0.000 Intergenic Intergenic -61922 NR_121677 101928131 Hs.406479 NR_121677 LOC101928131 - uncharacterized LOC101928131 ncRNA chr14-5086 chr14 86462236 86462446 + 4.95 0.000 Intergenic THE1D|LTR|ERVL-MaLR -443437 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr7-5566 chr7 47213602 47213812 + 4.95 0.000 Intergenic Intergenic 251096 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr12-6151 chr12 4179540 4179750 + 4.95 0.000 Intergenic L1MEc|LINE|L1 -94117 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chr2-11002 chr2 101901540 101901750 + 4.95 0.000 Intergenic Intergenic -81820 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr4-8279 chr4 141851222 141851432 + 4.95 0.000 Intergenic MER61B|LTR|ERV1 214744 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr19-6396 chr19 13319599 13319809 + 4.95 0.000 intron (NM_023035, intron 10 of 46) MER102a|DNA|hAT-Charlie 169293 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr14-4872 chr14 71067359 71067569 + 4.95 0.000 intron (NM_014982, intron 26 of 35) L1PA7|LINE|L1 160005 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr4-6209 chr4 54831046 54831256 + 4.95 0.000 Intergenic AluSc|SINE|Alu 173223 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr18-1210 chr18 35810138 35810348 + 4.95 0.000 Intergenic Intergenic 94683 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr10-4174 chr10 96495291 96495501 + 4.95 0.000 intron (NM_012465, intron 1 of 20) intron (NM_012465, intron 1 of 20) 18530 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr5-6554 chr5 15166908 15167118 + 4.95 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 99547 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr14-5228 chr14 98159023 98159233 + 4.95 0.000 Intergenic Intergenic -181004 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr8-6446 chr8 61074031 61074241 + 4.95 0.000 Intergenic AluJb|SINE|Alu -106388 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr12-8105 chr12 119206387 119206597 + 4.95 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 27702 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr2-13723 chr2 167724136 167724346 + 4.95 0.000 Intergenic Intergenic -94431 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr6-7546 chr6 70684208 70684418 + 4.95 0.000 intron (NM_001281440, intron 1 of 10) intron (NM_001281440, intron 1 of 10) 15783 NM_001281440 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr13-3139 chr13 87784902 87785112 + 4.95 0.000 Intergenic AluSq|SINE|Alu 25513 NR_104059 101930749 Hs.539610 NR_104059 ENSG00000223404 LINC00397 - long intergenic non-protein coding RNA 397 ncRNA chr22-3668 chr22 22944362 22944572 + 4.95 0.000 Intergenic Intergenic 56651 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr1-16686 chr1 244937481 244937691 + 4.95 0.000 Intergenic Intergenic -32283 NM_032328 84288 Hs.134857 NM_032328 ENSG00000203666 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding chr14-3388 chr14 94753562 94753772 + 4.95 0.000 Intergenic MIRb|SINE|MIR 16495 NM_173849 145258 Hs.440438 NM_173849 ENSG00000133937 GSC SAMS goosecoid homeobox protein-coding chr18-1457 chr18 46304379 46304589 + 4.95 0.000 Intergenic AluSz6|SINE|Alu -29534 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr6-7511 chr6 64809667 64809877 + 4.95 0.000 intron (NM_001292009, intron 22 of 43) L1PA16|LINE|L1 -491646 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr2-11913 chr2 24586511 24586721 + 4.95 0.000 intron (NM_001362950, intron 3 of 23) AluSx|SINE|Alu 2139 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr22-3717 chr22 25233417 25233627 + 4.95 0.000 Intergenic MER1B|DNA|hAT-Charlie 13883 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding chr9-8520 chr9 126011818 126012028 + 4.95 0.000 Intergenic Intergenic 263740 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr2-10310 chr2 144142399 144142609 + 4.95 0.000 intron (NM_001284238, intron 7 of 13) intron (NM_001284238, intron 7 of 13) 69075 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr4-6349 chr4 99579933 99580143 + 4.95 0.000 intron (NM_000253, intron 2 of 18) AluJb|SINE|Alu 15960 NM_001300785 4547 Hs.195799 NM_000253 ENSG00000138823 MTTP ABL|MTP microsomal triglyceride transfer protein protein-coding chr13-2885 chr13 112119449 112119659 + 4.95 0.000 Intergenic Intergenic 12435 NR_120394 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA chr4-5646 chr4 8215873 8216083 + 4.95 0.000 intron (NM_018986, intron 5 of 17) intron (NM_018986, intron 5 of 17) 16688 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr8-6316 chr8 46923532 46923742 + 4.95 0.000 Intergenic Intergenic 82751 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr4-6878 chr4 12239095 12239305 + 4.95 0.000 intron (NR_125910, intron 1 of 3) MLT1G3|LTR|ERVL-MaLR 15749 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr10-8123 chr10 69748621 69748831 + 4.95 0.000 Intergenic Intergenic -53180 NM_001368895 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr19-7030 chr19 50260634 50260844 + 4.95 0.000 intron (NM_024729, intron 18 of 40) intron (NM_024729, intron 18 of 40) 57111 NM_024729 79784 Hs.467142 NM_024729 ENSG00000105357 MYH14 DFNA4|DFNA4A|FP17425|MHC16|MYH17|NMHC II-C|NMHC-II-C|PNMHH|myosin myosin heavy chain 14 protein-coding chr8-3133 chr8 66870557 66870767 + 4.95 0.000 promoter-TSS (NM_001136161) promoter-TSS (NM_001136161) -109 NM_001136161 157777 Hs.437006 NM_173518 ENSG00000178460 MCMDC2 C8orf45 minichromosome maintenance domain containing 2 protein-coding chrX-4183 chrX 34131496 34131706 + 4.95 0.000 exon (NM_203408, exon 1 of 1) exon (NM_203408, exon 1 of 1) 729 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr2-7451 chr2 12776740 12776950 + 4.95 0.000 Intergenic MER5A|DNA|hAT-Charlie 39478 NR_036072 100422986 NR_036072 ENSG00000264370 MIR3125 mir-3125 microRNA 3125 ncRNA chr16-5328 chr16 79330203 79330413 + 4.95 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 270429 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr19-6709 chr19 36135541 36135751 + 4.95 0.000 Intergenic L2a|LINE|L2 -4420 NM_001302632 826 Hs.515371 NM_001749 ENSG00000126247 CAPNS1 CALPAIN4|CANP|CANPS|CAPN4|CDPS|CSS1 calpain small subunit 1 protein-coding chr17-7665 chr17 30181386 30181596 + 4.95 0.000 intron (NM_032141, intron 6 of 6) AluJo|SINE|Alu 54206 NM_001045 6532 Hs.29792 NM_001045 ENSG00000108576 SLC6A4 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT solute carrier family 6 member 4 protein-coding chr3-4669 chr3 42465358 42465568 + 4.95 0.000 Intergenic Intergenic -23836 NM_001251882 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr2-13622 chr2 159443146 159443356 + 4.95 0.000 intron (NM_001329858, intron 6 of 36) intron (NM_001329858, intron 6 of 36) -156548 NM_001330276 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr15-5094 chr15 88428035 88428245 + 4.95 0.000 Intergenic Intergenic 39248 NM_022163 26589 Hs.534261 NM_022163 ENSG00000259494 MRPL46 C15orf4|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding chr6-6323 chr6 47315438 47315648 + 4.95 0.000 Intergenic HERVK9-int|LTR|ERVK -5638 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr13-2963 chr13 52996878 52997088 + 4.95 0.000 Intergenic Intergenic -31830 NM_006418 10562 Hs.508113 NM_006418 ENSG00000102837 OLFM4 GC1|GW112|OLM4|OlfD|UNQ362|bA209J19.1|hGC-1|hOLfD olfactomedin 4 protein-coding chr2-10725 chr2 29987951 29988161 + 4.95 0.000 Intergenic LTR16C|LTR|ERVL -66470 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr5-4834 chr5 61583120 61583330 + 4.95 0.000 Intergenic Intergenic -54535 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr19-6903 chr19 45553772 45553982 + 4.95 0.000 exon (NM_025136, exon 2 of 2) exon (NM_025136, exon 2 of 2) 30925 NM_001017989 80207 Hs.466945 NM_025136 ENSG00000125741 OPA3 MGA3 outer mitochondrial membrane lipid metabolism regulator OPA3 protein-coding chr1-7354 chr1 16250651 16250861 + 4.95 0.000 exon (NM_018994, exon 10 of 10) exon (NM_018994, exon 10 of 10) -13573 NM_030907 79363 Hs.546430 NM_030907 ENSG00000132881 CPLANE2 C1orf89|RSG1 ciliogenesis and planar polarity effector 2 protein-coding chr2-9162 chr2 212329584 212329794 + 4.95 0.000 intron (NM_001042599, intron 1 of 26) MER5B|DNA|hAT-Charlie 96671 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr1-15952 chr1 190826061 190826271 + 4.95 0.000 Intergenic L1MC3|LINE|L1 201276 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA chr8-6361 chr8 52915028 52915238 + 4.95 0.000 Intergenic Intergenic -24775 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr20-2338 chr20 11596577 11596787 + 4.95 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 274033 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr17-7662 chr17 30124497 30124707 + 4.95 0.000 intron (NM_032141, intron 2 of 6) LTR33A_|LTR|ERVL -7442 NR_036149 100423003 NR_036149 ENSG00000284399 MIR3184 - microRNA 3184 ncRNA chr8-6042 chr8 24017726 24017936 + 4.95 0.000 Intergenic Intergenic -163025 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr7-8860 chr7 89718949 89719159 + 4.95 0.000 Intergenic L1P2|LINE|L1 -400346 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr10-4943 chr10 26497569 26497779 + 4.95 0.000 intron (NM_019043, intron 4 of 14) intron (NM_019043, intron 4 of 14) 59333 NM_019043 54518 Hs.310421 NM_019043 ENSG00000077420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta precursor protein binding family B member 1 interacting protein protein-coding chrX-5343 chrX 148367232 148367442 + 4.95 0.000 Intergenic MER2|DNA|TcMar-Tigger -133280 NM_001169122 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr2-13126 chr2 116523375 116523585 + 4.95 0.000 Intergenic L1PREC2|LINE|L1 1179665 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr13-3228 chr13 27533157 27533367 + 4.95 0.000 Intergenic Intergenic -82660 NM_001166263 219402 Hs.534582 NM_152912 ENSG00000122033 MTIF3 IF3mt mitochondrial translational initiation factor 3 protein-coding chr22-2167 chr22 43314053 43314263 + 4.95 0.000 intron (NM_173050, intron 3 of 21) intron (NM_173050, intron 3 of 21) 29214 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chr3-10681 chr3 150808219 150808429 + 4.95 0.000 Intergenic Intergenic -45155 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding chr1-10993 chr1 217292871 217293081 + 4.95 0.000 Intergenic MER6|DNA|TcMar-Tigger -155274 NM_001350124 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr7-8158 chr7 29205511 29205721 + 4.95 0.000 intron (NR_120522, intron 1 of 2) CR1_Mam|LINE|CR1 3354 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr2-11492 chr2 235160407 235160617 + 4.95 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 132777 NM_001371306 chr8-6853 chr8 99593204 99593414 + 4.95 0.000 intron (NM_017890, intron 33 of 61) L1PA11|LINE|L1 -56448 NR_030596 100126309 NR_030596 ENSG00000216069 MIR875 MIRN875|hsa-mir-875 microRNA 875 ncRNA chr22-3982 chr22 38408801 38409011 + 4.95 0.000 Intergenic L1MA8|LINE|L1 -9980 NR_002821 400927 Hs.720223 NR_002821 TPTEP2 Z98749.2 TPTE pseudogene 2 pseudo chr10-8516 chr10 91323360 91323570 + 4.95 0.000 intron (NR_024467, intron 4 of 4) SVA_D|Retroposon|SVA -85770 NM_001348365 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr17-8269 chr17 67211787 67211997 + 4.95 0.000 intron (NM_001330447, intron 5 of 32) (GGGAA)n|Simple_repeat|Simple_repeat -32884 NR_136398 101928021 Hs.569824 NR_136398 LOC101928021 - uncharacterized LOC101928021 ncRNA chr1-14636 chr1 57151775 57151985 + 4.95 0.000 intron (NM_001353980, intron 5 of 5) AluSx1|SINE|Alu -185740 NM_001278544 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr7-8197 chr7 31589475 31589685 + 4.95 0.000 intron (NM_194300, intron 8 of 12) L1MEf|LINE|L1 36578 NM_194300 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chrX-2170 chrX 38585628 38585838 + 4.95 0.000 intron (NM_004615, intron 1 of 7) MSTB1|LTR|ERVL-MaLR 24255 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr1-13537 chr1 6477207 6477417 + 4.95 0.000 intron (NM_001042663, intron 3 of 21) intron (NM_001042663, intron 3 of 21) 8157 NM_001265593 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr6-7419 chr6 53042551 53042761 + 4.95 0.000 intron (NM_014920, intron 1 of 13) intron (NM_014920, intron 1 of 13) 19146 NM_016513 22858 Hs.417022 NM_014920 ENSG00000112144 ICK ECO|EJM10|LCK2|MRK intestinal cell kinase protein-coding chr4-7604 chr4 81869637 81869847 + 4.95 0.000 Intergenic L1ME2z|LINE|L1 -397835 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr13-2838 chr13 108495768 108495978 + 4.95 0.000 Intergenic CpG -100032 NM_015011 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr13-4096 chr13 78101298 78101508 + 4.95 0.000 intron (NR_047001, intron 1 of 5) intron (NR_047001, intron 1 of 5) 46548 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr11-10519 chr11 119567816 119568026 + 4.95 0.000 Intergenic Intergenic -142936 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr7-8500 chr7 51899671 51899881 + 4.95 0.000 Intergenic Intergenic -506520 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr8-7392 chr8 139368820 139369030 + 4.95 0.000 Intergenic LTR16|LTR|ERVL 334198 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr20-3313 chr20 17045791 17046001 + 4.95 0.000 Intergenic Intergenic -180211 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr5-8433 chr5 128344138 128344348 + 4.95 0.000 intron (NM_001999, intron 25 of 64) AluJr|SINE|Alu 194002 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr9-6730 chr9 10202589 10202799 + 4.95 0.000 intron (NM_002839, intron 3 of 45) (AT)n|Simple_repeat|Simple_repeat 403302 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr18-3249 chr18 49371722 49371932 + 4.95 0.000 intron (NM_001353210, intron 5 of 16) intron (NM_001353210, intron 5 of 16) 88818 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr3-9626 chr3 58496514 58496724 + 4.95 0.000 intron (NM_001128214, intron 1 of 2) L2a|LINE|L2 -1746 NM_153331 200845 Hs.13982 NM_153331 ENSG00000168301 KCTD6 KCASH3 potassium channel tetramerization domain containing 6 protein-coding chr2-12865 chr2 96906650 96906860 + 4.95 0.000 intron (NM_001122646, intron 12 of 16) intron (NM_001122646, intron 12 of 16) -8622 NM_016490 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr5-8234 chr5 110018457 110018667 + 4.95 0.000 Intergenic L1P4b|LINE|L1 135380 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chrX-2584 chrX 104501362 104501572 + 4.95 0.000 Intergenic AluSq|SINE|Alu -64732 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr12-6830 chr12 13541214 13541424 + 4.95 0.000 3' UTR (NM_000834, exon 13 of 13) 3' UTR (NM_000834, exon 13 of 13) -164574 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr21-1317 chr21 7940151 7940361 + 4.95 0.000 Intergenic (ATTCCATTCC)n|Simple_repeat|Simple_repeat -110624 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chr6-7486 chr6 61736082 61736292 + 4.95 0.000 intron (NR_146874, intron 6 of 13) HAL1|LINE|L1 162057 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr11-10650 chr11 126623937 126624147 + 4.95 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -28736 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA ML143364.1-4 ML143364.1 25338 25548 + 4.95 0.000 NA NA NA NA chr2-7080 chr2 170577904 170578114 + 4.95 0.000 intron (NM_001083615, intron 31 of 33) intron (NM_001083615, intron 31 of 33) 136558 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr11-7699 chr11 68927355 68927565 + 4.95 0.000 intron (NM_002180, intron 7 of 14) L1M4|LINE|L1 23609 NM_002180 3508 Hs.503048 NM_002180 ENSG00000132740 IGHMBP2 CATF1|CMT2S|HCSA|HMN6|SMARD1|SMUBP2|ZFAND7 immunoglobulin mu DNA binding protein 2 protein-coding chr2-7806 chr2 44807017 44807227 + 4.95 0.000 Intergenic Intergenic 131766 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr16-6133 chr16 19946624 19946834 + 4.95 0.000 Intergenic AluJb|SINE|Alu -61095 NM_001304771 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chr1-12437 chr1 13701343 13701553 + 4.95 0.000 intron (NM_001135610, intron 1 of 7) intron (NM_001135610, intron 1 of 7) 1260 NM_001135610 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr5-9173 chr5 177713175 177713385 + 4.95 0.000 intron (NR_146226, intron 28 of 28) AluY|SINE|Alu -41003 NR_026921 202181 Hs.189914 NR_026921 LOC202181 - SUMO interacting motifs containing 1 pseudogene pseudo chr5-8212 chr5 107917815 107918025 + 4.95 0.000 intron (NM_001163315, intron 7 of 8) intron (NM_001163315, intron 7 of 8) -246983 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr12-6772 chr12 8288438 8288648 + 4.95 0.000 Intergenic HERVE-int|LTR|ERV1 -45597 NR_024254 653113 Hs.661749 NR_024254 FAM86FP - family with sequence similarity 86, member A pseudogene pseudo chr8-6484 chr8 63109025 63109235 + 4.95 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -23077 NM_000370 7274 Hs.69049 NM_000370 ENSG00000137561 TTPA ATTP|AVED|TTP1|alphaTTP alpha tocopherol transfer protein protein-coding chr17-4539 chr17 77711113 77711323 + 4.95 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 17341 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr8-6324 chr8 48156557 48156767 + 4.95 0.000 Intergenic L1M3d|LINE|L1 148231 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chrX-4749 chrX 94281858 94282068 + 4.95 0.000 Intergenic L1PB1|LINE|L1 607757 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr12-7392 chr12 57282733 57282943 + 4.95 0.000 intron (NM_001351215, intron 11 of 22) intron (NM_001351215, intron 11 of 22) -31651 NM_001286257 246329 Hs.417595 NM_145064 ENSG00000185482 STAC3 MYPBB|NAM SH3 and cysteine rich domain 3 protein-coding chr5-6459 chr5 170776307 170776517 + 4.95 0.000 Intergenic MIRb|SINE|MIR -7307 NM_001291985 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr9-5522 chr9 107385225 107385435 + 4.95 0.000 Intergenic AluSg|SINE|Alu 81255 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr4-4584 chr4 75999415 75999625 + 4.95 0.000 intron (NR_125906, intron 2 of 2) LTR33C|LTR|ERVL 7989 NM_002416 4283 Hs.77367 NM_002416 ENSG00000138755 CXCL9 CMK|Humig|MIG|SCYB9|crg-10 C-X-C motif chemokine ligand 9 protein-coding chr15-4684 chr15 65453364 65453574 + 4.95 0.000 intron (NM_017743, intron 15 of 17) (AC)n|Simple_repeat|Simple_repeat -30522 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr3-8523 chr3 138484432 138484642 + 4.95 0.000 Intergenic LTR12C|LTR|ERV1 49921 NM_031913 83850 Hs.477711 NM_031913 ENSG00000158220 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin 3 protein-coding chr4-6906 chr4 14877681 14877891 + 4.95 0.000 intron (NR_126435, intron 1 of 6) intron (NR_126435, intron 1 of 6) 10383 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr1-13950 chr1 24186797 24187007 + 4.95 0.000 intron (NM_173065, intron 1 of 5) intron (NM_173065, intron 1 of 5) 387 NM_170743 163702 Hs.221375 NM_170743 ENSG00000185436 IFNLR1 CRF2/12|IFNLR|IL-28R1|IL28RA|LICR2 interferon lambda receptor 1 protein-coding chr2-13632 chr2 159811603 159811813 + 4.95 0.000 intron (NM_002349, intron 31 of 34) intron (NM_002349, intron 31 of 34) -13453 NM_001198763 9936 Hs.130014 NM_014880 ENSG00000241399 CD302 BIMLEC|CLEC13A|DCL-1|DCL1 CD302 molecule protein-coding chr19-5823 chr19 40583472 40583682 + 4.95 0.000 intron (NM_138392, intron 11 of 17) intron (NM_138392, intron 11 of 17) 6704 NM_138392 92799 Hs.26506 NM_138392 ENSG00000160410 SHKBP1 PP203|Sb1 SH3KBP1 binding protein 1 protein-coding chr15-3358 chr15 83794184 83794394 + 4.95 0.000 intron (NM_207517, intron 4 of 29) L1MD1|LINE|L1 140166 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr16-6747 chr16 74992991 74993201 + 4.95 0.000 Intergenic AluJb|SINE|Alu -5928 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr22-3780 chr22 29075067 29075277 + 4.95 0.000 intron (NM_001039570, intron 1 of 8) intron (NM_001039570, intron 1 of 8) 2137 NM_032045 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 ECTD13|KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr1-11289 chr1 10161330 10161540 + 4.95 0.000 intron (NM_006048, intron 22 of 26) intron (NM_006048, intron 22 of 26) -49135 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr6-5609 chr6 43462691 43462901 + 4.95 0.000 Intergenic L2a|LINE|L2 -6164 NM_001286655 65989 Hs.337251 NM_023932 ENSG00000171462 DLK2 DLK-2|EGFL9 delta like non-canonical Notch ligand 2 protein-coding chr4-7445 chr4 68156781 68156991 + 4.95 0.000 Intergenic L1PA16|LINE|L1 -25406 NR_015446 100130017 Hs.582037 NR_015446 ENSG00000250426 FTLP10 - ferritin light chain pseudogene 10 pseudo chr2-9766 chr2 100966446 100966656 + 4.95 0.000 intron (NM_002518, intron 10 of 20) intron (NM_002518, intron 10 of 20) 10610 NR_110213 101927142 Hs.656556 NR_110213 LOC101927142 - uncharacterized LOC101927142 ncRNA chr9-7644 chr9 42856049 42856259 + 4.95 0.000 Intergenic Intergenic 67754 NR_131213 105500239 NR_131213 XLOC_007697 - uncharacterized LOC105500239 ncRNA chr8-4883 chr8 69777416 69777626 + 4.95 0.000 intron (NM_001146009, intron 1 of 7) intron (NM_001146009, intron 1 of 7) 55648 NM_001146009 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr5-7871 chr5 73167813 73168023 + 4.95 0.000 Intergenic ERVL-E-int|LTR|ERVL -5275 NM_153217 134288 Hs.508588 NM_153217 ENSG00000164325 TMEM174 - transmembrane protein 174 protein-coding chr8-7119 chr8 119868469 119868679 + 4.95 0.000 Intergenic LTR8|LTR|ERV1 -5081 NM_001283012 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr14-4554 chr14 44842174 44842384 + 4.95 0.000 Intergenic MLT2B2|LTR|ERVL -43153 NR_146457 101927351 Hs.196842 NR_146457 LINC02302 - long intergenic non-protein coding RNA 2302 ncRNA chr1-14839 chr1 76128655 76128865 + 4.95 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 54014 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr1-12134 chr1 171355072 171355282 + 4.95 0.000 Intergenic Intergenic 16281 NR_002719 7151 Hs.661092 NR_002719 TOP1P1 - DNA topoisomerase I pseudogene 1 pseudo chr12-6576 chr12 122003557 122003767 + 4.95 0.000 exon (NM_144668, exon 22 of 22) exon (NM_144668, exon 22 of 22) -18222 NM_001024808 605 Hs.530970 NM_020993 ENSG00000110987 BCL7A BCL7 BAF chromatin remodeling complex subunit BCL7A protein-coding chr8-3177 chr8 100684072 100684282 + 4.95 0.000 Intergenic AluSq|SINE|Alu 18847 NR_106992 102466854 NR_106992 ENSG00000284570 MIR7705 hsa-mir-7705 microRNA 7705 ncRNA chr2-12279 chr2 46231403 46231613 + 4.95 0.000 Intergenic Intergenic -65899 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr11-6036 chr11 27800610 27800820 + 4.95 0.000 Intergenic AluYb8|SINE|Alu -78685 NM_170731 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chrX-3024 chrX 69493370 69493580 + 4.95 0.000 Intergenic Intergenic -11760 NM_015686 27112 Hs.87619 NM_015686 ENSG00000130054 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155 member B protein-coding chr15-4624 chr15 62184130 62184340 + 4.95 0.000 Intergenic A-rich|Low_complexity|Low_complexity -18950 NM_001007595 388125 Hs.144372 NM_001007595 ENSG00000205502 C2CD4B FAM148B|NLF2 C2 calcium dependent domain containing 4B protein-coding chr10-6280 chr10 90942271 90942481 + 4.95 0.000 Intergenic Intergenic -4924 NR_131214 105378427 NR_131214 XLOC_008559 - uncharacterized LOC105378427 ncRNA chr4-3224 chr4 47039258 47039468 + 4.95 0.000 intron (NM_000812, intron 3 of 8) (A)n|Simple_repeat|Simple_repeat 7796 NM_000812 2560 Hs.27283 NM_000812 ENSG00000163288 GABRB1 EIEE45 gamma-aminobutyric acid type A receptor beta1 subunit protein-coding chrX-5144 chrX 130707725 130707935 + 4.95 0.000 intron (NM_001281736, intron 2 of 13) MIRc|SINE|MIR -94806 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr7-6218 chr7 131315945 131316155 + 4.95 0.000 intron (NR_125364, intron 4 of 5) L1PA8|LINE|L1 11729 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr14-5239 chr14 99243692 99243902 + 4.95 0.000 intron (NM_001282237, intron 2 of 3) intron (NM_001282237, intron 2 of 3) 28400 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr5-6911 chr5 133878693 133878903 + 4.95 0.000 Intergenic MER50|LTR|ERV1 -34879 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr12-2606 chr12 122306910 122307120 + 4.95 0.000 intron (NM_198240, intron 18 of 23) AluSg7|SINE|Alu -40521 NM_001351021 65082 Hs.487883 NM_022916 ENSG00000139719 VPS33A MPSPS VPS33A core subunit of CORVET and HOPS complexes protein-coding chr12-5802 chr12 19058719 19058929 + 4.95 0.000 Intergenic Intergenic -70909 NM_001143821 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chrX-4064 chrX 19853480 19853690 + 4.95 0.000 intron (NM_031892, intron 1 of 17) intron (NM_031892, intron 1 of 17) -20434 NM_001353893 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr17-7214 chr17 742300 742510 + 4.95 0.000 3' UTR (NM_024792, exon 5 of 5) 3' UTR (NM_024792, exon 5 of 5) 9809 NM_024792 79850 Hs.154396 NM_024792 ENSG00000167695 TLCD3A CT120|FAM57A TLC domain containing 3A protein-coding chr2-9950 chr2 1588550 1588760 + 4.95 0.000 Intergenic Intergenic 155860 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr9-7418 chr9 21966180 21966390 + 4.95 0.000 promoter-TSS (NR_024274) promoter-TSS (NR_024274) -854 NR_024274 51198 Hs.721053 NM_016349 CDKN2A-DT C9orf53|CDKN2A-AS1|bA149I2.3 CDKN2A divergent transcript ncRNA chr3-5167 chr3 60988802 60989012 + 4.95 0.000 intron (NR_148922, intron 3 of 3) intron (NR_148922, intron 3 of 3) 262545 NM_001320899 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr18-1535 chr18 11678889 11679099 + 4.95 0.000 Intergenic Intergenic -10270 NM_182978 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr8-5393 chr8 25925458 25925668 + 4.95 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 119850 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr9-7899 chr9 88462194 88462404 + 4.95 0.000 intron (NM_006717, intron 3 of 5) intron (NM_006717, intron 3 of 5) -72802 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr12-6724 chr12 5519271 5519481 + 4.95 0.000 Intergenic MIRc|SINE|MIR 25244 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr1-15491 chr1 155765651 155765861 + 4.95 0.000 exon (NM_001282860, exon 21 of 32) exon (NM_001282860, exon 21 of 32) 18076 NR_132767 106633816 NR_132767 SCARNA26B - small Cajal body-specific RNA 26B ncRNA chr13-3427 chr13 100443957 100444167 + 4.95 0.000 intron (NM_001352605, intron 20 of 22) L2c|LINE|L2 36953 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr11-9008 chr11 24708321 24708531 + 4.95 0.000 intron (NM_001252008, intron 1 of 11) intron (NM_001252008, intron 1 of 11) 211373 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr3-7476 chr3 141010264 141010474 + 4.95 0.000 Intergenic AluJr|SINE|Alu -40978 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr14-4871 chr14 70966238 70966448 + 4.95 0.000 intron (NM_014982, intron 3 of 35) intron (NM_014982, intron 3 of 35) 58884 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr8-6366 chr8 53240507 53240717 + 4.95 0.000 intron (NM_000912, intron 2 of 3) intron (NM_000912, intron 2 of 3) 11025 NM_000912 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr4-5481 chr4 71839537 71839747 + 4.95 0.000 Intergenic Intergenic -34122 NM_001204306 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr2-10849 chr2 60001580 60001790 + 4.95 0.000 Intergenic Intergenic 381351 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr4-7114 chr4 35380758 35380968 + 4.95 0.000 Intergenic MSTB|LTR|ERVL-MaLR 863076 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chrX-3747 chrX 125162752 125162962 + 4.95 0.000 Intergenic L2|LINE|L2 -157014 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr4-5798 chr4 81618091 81618301 + 4.95 0.000 Intergenic Intergenic -146289 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr6-7004 chr6 21823923 21824133 + 4.95 0.000 intron (NR_015410, intron 4 of 11) intron (NR_015410, intron 4 of 11) 157615 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr6-7247 chr6 41656435 41656645 + 4.95 0.000 Intergenic Intergenic 18072 NM_001300806 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding chr3-8386 chr3 96777432 96777642 + 4.95 0.000 Intergenic Intergenic -37057 NM_001080448 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr2-13626 chr2 159722545 159722755 + 4.95 0.000 intron (NM_001282805, intron 3 of 11) intron (NM_001282805, intron 3 of 11) 10144 NM_001282805 64844 Hs.529272 NM_022826 ENSG00000136536 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane associated ring-CH-type finger 7 protein-coding chr4-6485 chr4 152170547 152170757 + 4.95 0.000 Intergenic Intergenic 69834 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr2-10761 chr2 38215465 38215675 + 4.95 0.000 Intergenic Intergenic 84465 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr11-7479 chr11 935780 935990 + 4.95 0.000 intron (NR_144509, intron 1 of 20) AluSg7|SINE|Alu 10015 NM_012305 161 Hs.19121 NM_012305 ENSG00000183020 AP2A2 ADTAB|CLAPA2|HIP-9|HIP9|HYPJ adaptor related protein complex 2 subunit alpha 2 protein-coding chr5-6418 chr5 152456170 152456380 + 4.95 0.000 Intergenic Intergenic -50996 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr19-3813 chr19 7528169 7528379 + 4.95 0.000 intron (NM_020533, intron 7 of 13) intron (NM_020533, intron 7 of 13) 5650 NM_020533 57192 Hs.631858 NM_020533 ENSG00000090674 MCOLN1 MG-2|ML1|ML4|MLIV|MST080|MSTP080|TRP-ML1|TRPM-L1|TRPML1 mucolipin 1 protein-coding chr12-6673 chr12 3018731 3018941 + 4.95 0.000 intron (NM_201443, intron 5 of 10) intron (NM_201443, intron 5 of 10) -58519 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr12-4096 chr12 56601462 56601672 + 4.95 0.000 exon (NM_013449, exon 20 of 29) exon (NM_013449, exon 20 of 29) 28759 NM_001300905 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr2-13752 chr2 170165674 170165884 + 4.95 0.000 Intergenic Intergenic -12368 NR_045684 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr3-9939 chr3 89477313 89477523 + 4.95 0.000 intron (NM_005233, intron 16 of 16) L3|LINE|CR1 369797 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr10-7893 chr10 49770771 49770981 + 4.95 0.000 Intergenic L1ME4a|LINE|L1 -8497 NM_001347823 55753 Hs.17860 NM_018245 ENSG00000197444 OGDHL - oxoglutarate dehydrogenase like protein-coding chr5-4460 chr5 6359523 6359733 + 4.95 0.000 Intergenic Intergenic 18919 NM_032286 84246 Hs.13885 NM_032286 ENSG00000133398 MED10 L6|NUT2|TRG20 mediator complex subunit 10 protein-coding chr7-2828 chr7 100522915 100523125 + 4.95 0.000 Intergenic SVA_D|Retroposon|SVA -16183 NM_006076 3268 Hs.521083 NM_006076 ENSG00000106351 AGFG2 HRBL|RABR ArfGAP with FG repeats 2 protein-coding chr4-7876 chr4 104538717 104538927 + 4.95 0.000 intron (NR_125926, intron 1 of 9) L2|LINE|L2 -43928 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr15-5168 chr15 92511708 92511918 + 4.95 0.000 Intergenic HERVH-int|LTR|ERV1 40136 NR_161370 145858 Hs.367879 NM_153040 C15orf32 - chromosome 15 open reading frame 32 ncRNA chr12-8347 chr12 131795201 131795411 + 4.95 0.000 intron (NM_004592, intron 15 of 17) intron (NM_004592, intron 15 of 17) -33087 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr3-5429 chr3 170836821 170837031 + 4.95 0.000 Intergenic AluY|SINE|Alu 33269 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr6-8161 chr6 131646102 131646312 + 4.95 0.000 intron (NR_133007, intron 2 of 23) HAL1|LINE|L1 8905 NM_005021 5169 Hs.486489 NM_005021 ENSG00000154269 ENPP3 B10|CD203c|NPP3|PD-IBETA|PDNP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 protein-coding chr7-4740 chr7 65990855 65991065 + 4.95 0.000 Intergenic MER4CL34|LTR|ERV1 -8747 NM_001293105 2990 Hs.255230 NM_000181 ENSG00000169919 GUSB BG|MPS7 glucuronidase beta protein-coding chr16-6751 chr16 75140724 75140934 + 4.95 0.000 Intergenic AluY|SINE|Alu -7695 NM_001318472 162239 Hs.388813 NM_153688 ENSG00000184517 ZFP1 ZNF475 ZFP1 zinc finger protein protein-coding chr11-9636 chr11 66357358 66357568 + 4.95 0.000 intron (NR_135761, intron 1 of 1) AluY|SINE|Alu 9472 NR_135761 102724064 Hs.614641 NR_135761 ENSG00000255468 LOC102724064 - uncharacterized LOC102724064 ncRNA chr2-10961 chr2 86114808 86115018 + 4.95 0.000 intron (NM_017952, intron 4 of 23) MER68|LTR|ERVL 8678 NM_017952 55037 Hs.323489 NM_017952 ENSG00000132300 PTCD3 MRP-S39 pentatricopeptide repeat domain 3 protein-coding chr14-4073 chr14 63454750 63454960 + 4.95 0.000 intron (NM_001354926, intron 2 of 2) MIRc|SINE|MIR 53383 NM_001282181 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr15-5012 chr15 81612315 81612525 + 4.95 0.000 Intergenic L1MEh|LINE|L1 -238207 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding chr20-4235 chr20 48383148 48383358 + 4.95 0.000 Intergenic Intergenic 23342 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr1-12069 chr1 147390096 147390306 + 4.95 0.000 intron (NR_038423, intron 3 of 3) L1P4d|LINE|L1 127674 NR_038423 100289211 Hs.323484 NR_038423 ENSG00000278811 LINC00624 - long intergenic non-protein coding RNA 624 ncRNA chr2-13457 chr2 145878790 145879000 + 4.95 0.000 Intergenic Intergenic -708162 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr11-6616 chr11 73814000 73814210 + 4.95 0.000 intron (NR_134661, intron 3 of 5) intron (NR_134661, intron 3 of 5) 26231 NM_001318498 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr5-6743 chr5 78051071 78051281 + 4.95 0.000 intron (NM_003664, intron 22 of 26) intron (NM_003664, intron 22 of 26) 92929 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr4-5889 chr4 130633153 130633363 + 4.95 0.000 Intergenic L1PBa|LINE|L1 256897 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chrX-3424 chrX 15488135 15488345 + 4.95 0.000 intron (NM_001018109, intron 2 of 9) AluSp|SINE|Alu 3069 NR_037859 100532742 Hs.495728 NR_037859 PIR-FIGF - PIR-FIGF readthrough ncRNA chr22-2801 chr22 42735782 42735992 + 4.95 0.000 Intergenic Intergenic -14586 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr19-5376 chr19 8589856 8590066 + 4.95 0.000 exon (NM_030957, exon 16 of 26) exon (NM_030957, exon 16 of 26) 2235 NM_001282352 81794 Hs.657508 NM_030957 ENSG00000142303 ADAMTS10 ADAM-TS10|ADAMTS-10|WMS|WMS1 ADAM metallopeptidase with thrombospondin type 1 motif 10 protein-coding chr13-4371 chr13 107534727 107534937 + 4.95 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) -3584 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA chr1-13622 chr1 9800669 9800879 + 4.95 0.000 intron (NM_001009566, intron 1 of 18) AluSc8|SINE|Alu 23752 NM_014944 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr3-9910 chr3 86233399 86233609 + 4.95 0.000 Intergenic Intergenic -248439 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr2-10053 chr2 37533154 37533364 + 4.95 0.000 Intergenic (GA)n|Simple_repeat|Simple_repeat 138940 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr20-3808 chr20 23458056 23458266 + 4.95 0.000 Intergenic Intergenic -5285 NM_080830 140880 Hs.128100 NM_080830 ENSG00000125831 CST11 CST8L|CTES2|SC13|dJ322G13.6 cystatin 11 protein-coding chr13-3890 chr13 52937089 52937299 + 4.95 0.000 Intergenic MER68|LTR|ERVL -88554 NM_002590 5100 Hs.19492 NM_002590 ENSG00000136099 PCDH8 ARCADLIN|PAPC protocadherin 8 protein-coding chr13-4275 chr13 98103300 98103510 + 4.95 0.000 Intergenic MER21C|LTR|ERVL -39184 NM_001286839 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, ARH/RhoGEF and pleckstrin domain protein 1 protein-coding chr2-11447 chr2 225589502 225589712 + 4.95 0.000 intron (NM_001371273, intron 5 of 7) AluJr4|SINE|Alu 188721 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr2-12534 chr2 66038429 66038639 + 4.95 0.000 Intergenic Intergenic 319794 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr2-7502 chr2 19462351 19462561 + 4.95 0.000 Intergenic Intergenic -103833 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chrX-3473 chrX 33016123 33016333 + 4.95 0.000 intron (NM_000109, intron 2 of 78) PABL_A|LTR|ERV1 112199 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr12-5368 chr12 119507401 119507611 + 4.95 0.000 intron (NM_178499, intron 7 of 13) (TA)n|Simple_repeat|Simple_repeat -86268 NM_001136534 387890 Hs.530965 NM_001136534 ENSG00000224982 TMEM233 DSPB2|IFITMD2 transmembrane protein 233 protein-coding chr8-5049 chr8 26077716 26077926 + 4.95 0.000 Intergenic Intergenic -32408 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr7-6766 chr7 15199519 15199729 + 4.95 0.000 TTS (NM_001004320) TTS (NM_001004320) -224766 NM_001350717 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr16-4662 chr16 75842985 75843195 + 4.95 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -116600 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chrX-3427 chrX 16175593 16175803 + 4.95 0.000 Intergenic Intergenic 8217 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - MAGE family member B17 protein-coding chr1-3631 chr1 48776486 48776696 + 4.95 0.000 intron (NM_001349794, intron 1 of 6) CpG 300 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr3-8640 chr3 172918115 172918325 + 4.95 0.000 intron (NM_031955, intron 8 of 10) intron (NM_031955, intron 8 of 10) 167218 NM_001349099 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr12-7481 chr12 65934486 65934696 + 4.95 0.000 intron (NM_001300918, intron 3 of 4) intron (NM_001300918, intron 3 of 4) -52266 NR_158985 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr13-3251 chr13 33639148 33639358 + 4.95 0.000 intron (NM_001243476, intron 3 of 17) L2a|LINE|L2 37541 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr13-4158 chr13 85916635 85916845 + 4.95 0.000 Intergenic L1PA4|LINE|L1 -117321 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr7-7528 chr7 105322569 105322779 + 4.95 0.000 intron (NM_001350746, intron 2 of 14) L1MB5|LINE|L1 -23895 NM_001278273 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr5-8118 chr5 98457182 98457392 + 4.95 0.000 Intergenic Intergenic -296048 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr5-7934 chr5 79487993 79488203 + 4.95 0.000 intron (NM_001277078, intron 1 of 5) intron (NM_001277078, intron 1 of 5) 25738 NM_001277077 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr6-6947 chr6 16568606 16568816 + 4.95 0.000 intron (NM_000332, intron 5 of 8) intron (NM_000332, intron 5 of 8) 191473 NR_152113 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr2-13687 chr2 164420102 164420312 + 4.95 0.000 Intergenic L2a|LINE|L2 148288 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr18-2880 chr18 10145507 10145717 + 4.95 0.000 Intergenic Intergenic 231596 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr4-5398 chr4 2874056 2874266 + 4.95 0.000 intron (NM_001286645, intron 2 of 17) AluJo|SINE|Alu 30011 NM_001286645 118 Hs.183706 NM_001119 ENSG00000087274 ADD1 ADDA adducin 1 protein-coding chr14-5042 chr14 80787889 80788099 + 4.95 0.000 intron (NM_152446, intron 14 of 24) intron (NM_152446, intron 14 of 24) 153744 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr3-6968 chr3 164870643 164870853 + 4.95 0.000 Intergenic Intergenic -39268 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr14-3389 chr14 94756857 94757067 + 4.95 0.000 Intergenic AluSz|SINE|Alu 13200 NM_173849 145258 Hs.440438 NM_173849 ENSG00000133937 GSC SAMS goosecoid homeobox protein-coding chr4-5693 chr4 26919950 26920160 + 4.95 0.000 intron (NM_001169118, intron 2 of 12) MLT1H2|LTR|ERVL-MaLR 59214 NM_001169118 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chr16-6986 chr16 87233755 87233965 + 4.95 0.000 Intergenic Intergenic 21745 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chrX-4533 chrX 67904400 67904610 + 4.95 0.000 Intergenic L1PREC2|LINE|L1 359882 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr2-13841 chr2 176829190 176829400 + 4.95 0.000 Intergenic Intergenic 191541 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr4-7892 chr4 105555331 105555541 + 4.95 0.000 intron (NM_001242729, intron 1 of 13) intron (NM_001242729, intron 1 of 13) 2816 NM_017700 54848 Hs.585224 NM_017700 ENSG00000236699 ARHGEF38 - Rho guanine nucleotide exchange factor 38 protein-coding chr1-13387 chr1 1656425 1656635 + 4.95 0.000 intron (NM_001787, intron 2 of 19) AluY|SINE|Alu 2474 NM_033490 984 Hs.651228 NM_001787 ENSG00000248333 CDK11B CDC2L1|CDK11|CDK11-p110|CDK11-p46|CDK11-p58|CLK-1|PITSLREA|PK58|p58|p58CDC2L1|p58CLK-1 cyclin dependent kinase 11B protein-coding chr3-10485 chr3 135192793 135193003 + 4.95 0.000 intron (NM_004441, intron 11 of 15) intron (NM_004441, intron 11 of 15) 397638 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr5-7820 chr5 66717547 66717757 + 4.95 0.000 intron (NM_001290228, intron 1 of 4) intron (NM_001290228, intron 1 of 4) -111121 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr14-2283 chr14 52906146 52906356 + 4.95 0.000 intron (NM_006832, intron 3 of 14) L1ME1|LINE|L1 44799 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr3-10342 chr3 127532410 127532620 + 4.95 0.000 intron (NR_125397, intron 4 of 6) MSTB2|LTR|ERVL-MaLR 5265 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr1-13111 chr1 191565122 191565332 + 4.95 0.000 Intergenic Intergenic -336729 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr12-7098 chr12 44645605 44645815 + 4.95 0.000 intron (NM_006159, intron 14 of 20) MIRb|SINE|MIR 229951 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr5-7835 chr5 68425350 68425560 + 4.95 0.000 Intergenic LTR33B|LTR|ERVL 132878 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr12-7382 chr12 57102737 57102947 + 4.95 0.000 exon (NM_003153, exon 12 of 22) exon (NM_003153, exon 12 of 22) 7447 NM_001178079 6778 Hs.524518 NM_003153 ENSG00000166888 STAT6 D12S1644|IL-4-STAT|STAT6B|STAT6C signal transducer and activator of transcription 6 protein-coding chr11-7980 chr11 10258579 10258789 + 4.95 0.000 intron (NM_030962, intron 1 of 39) intron (NM_030962, intron 1 of 39) 35523 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr20-3472 chr20 56820110 56820320 + 4.95 0.000 Intergenic (TCTCTG)n|Simple_repeat|Simple_repeat 190909 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr21-1938 chr21 45629408 45629618 + 4.95 0.000 Intergenic Intergenic -14212 NM_001348239 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr6-4728 chr6 64077479 64077689 + 4.95 0.000 intron (NM_001292009, intron 32 of 43) intron (NM_001292009, intron 32 of 43) 270748 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr12-7473 chr12 64807791 64808001 + 4.95 0.000 intron (NM_001330188, intron 3 of 13) AluJr4|SINE|Alu -16751 NM_001364838 23329 Hs.192492 NM_015279 ENSG00000111490 TBC1D30 - TBC1 domain family member 30 protein-coding chr2-10872 chr2 65208465 65208675 + 4.95 0.000 Intergenic AluY|SINE|Alu -19125 NM_005722 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr7-7084 chr7 155569485 155569695 + 4.95 0.000 intron (NM_001369813, intron 1 of 4) intron (NM_001369813, intron 1 of 4) 1156 NM_001369813 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr6-6823 chr6 7017626 7017836 + 4.95 0.000 Intergenic Intergenic -90012 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr11-10577 chr11 122751497 122751707 + 4.95 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) -86898 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr5-7888 chr5 75117467 75117677 + 4.95 0.000 intron (NM_001164443, intron 17 of 24) intron (NM_001164443, intron 17 of 24) -65014 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding chr2-9635 chr2 15634998 15635208 + 4.95 0.000 Intergenic Intergenic 43235 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr17-8310 chr17 71333157 71333367 + 4.95 0.000 Intergenic AluJb|SINE|Alu -131083 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr6-8041 chr6 119911925 119912135 + 4.95 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -103149 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr15-2319 chr15 78997564 78997774 + 4.95 0.000 intron (NM_001145648, intron 19 of 26) AluSq2|SINE|Alu 7991 NM_153815 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr15-5100 chr15 88763882 88764092 + 4.95 0.000 Intergenic AluSz|SINE|Alu -39449 NM_001369268 176 Hs.2159 NM_001135 ENSG00000157766 ACAN AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD aggrecan protein-coding chr3-5543 chr3 2432574 2432784 + 4.95 0.000 intron (NM_175607, intron 3 of 24) (TG)n|Simple_repeat|Simple_repeat 193850 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr10-8092 chr10 68379659 68379869 + 4.95 0.000 intron (NR_103476, intron 11 of 18) intron (NR_103476, intron 11 of 18) 27425 NM_017987 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr1-12999 chr1 157720805 157721015 + 4.95 0.000 Intergenic MSTA|LTR|ERVL-MaLR -20141 NR_135214 115352 Hs.292449 NM_052939 ENSG00000160856 FCRL3 CD307c|FCRH3|IFGP3|IRTA3|SPAP2 Fc receptor like 3 protein-coding chr10-6999 chr10 72558265 72558475 + 4.95 0.000 intron (NM_006077, intron 3 of 11) L1MEi|LINE|L1 -34384 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chrX-4673 chrX 82885182 82885392 + 4.95 0.000 Intergenic L1PA16|LINE|L1 -623003 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr7-8476 chr7 49580199 49580409 + 4.95 0.000 Intergenic Intergenic -193334 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr4-3225 chr4 48794444 48794654 + 4.95 0.000 Intergenic AluSz|SINE|Alu -14250 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chrX-4284 chrX 42196317 42196527 + 4.95 0.000 Intergenic Intergenic -272868 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr1-15992 chr1 196579525 196579735 + 4.95 0.000 intron (NM_001287820, intron 1 of 26) AluSx|SINE|Alu 2851 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chrX-4743 chrX 93360966 93361176 + 4.95 0.000 Intergenic Intergenic 312507 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr1-11587 chr1 205103194 205103404 + 4.95 0.000 intron (NM_001193273, intron 5 of 13) intron (NM_001193273, intron 5 of 13) 18679 NM_001193273 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr8-6335 chr8 50718801 50719011 + 4.95 0.000 intron (NM_001287814, intron 16 of 16) intron (NM_001287814, intron 16 of 16) 554775 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr3-9585 chr3 55719547 55719757 + 4.95 0.000 intron (NR_132749, intron 14 of 17) intron (NR_132749, intron 14 of 17) -60183 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA chr6-4380 chr6 22213065 22213275 + 4.95 0.000 Intergenic Intergenic -65977 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr6-6568 chr6 136916497 136916707 + 4.95 0.000 Intergenic Intergenic -5699 NM_001008783 340146 Hs.369703 NM_001008783 ENSG00000182747 SLC35D3 FRCL1 solute carrier family 35 member D3 protein-coding chr3-10768 chr3 157121515 157121725 + 4.95 0.000 intron (NR_034007, intron 1 of 3) L4_C_Mam|LINE|RTE-X 1382 NR_034007 339894 Hs.478050 NR_034007 ENSG00000243629 LINC00880 - long intergenic non-protein coding RNA 880 ncRNA chr5-9061 chr5 170756515 170756725 + 4.95 0.000 Intergenic Intergenic -27099 NM_001291985 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr2-13115 chr2 113943242 113943452 + 4.95 0.000 intron (NM_005721, intron 8 of 11) L2c|LINE|L2 -25975 NR_148507 440900 Hs.662205 NR_034128 ENSG00000234199 LINC01191 VIN|lnc-ACTR3 long intergenic non-protein coding RNA 1191 ncRNA chr22-4174 chr22 45461984 45462194 + 4.95 0.000 Intergenic L1MDa|LINE|L1 -40794 NM_006486 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr6-6832 chr6 7349424 7349634 + 4.95 0.000 intron (NM_001170693, intron 10 of 12) L1PB1|LINE|L1 -36330 NM_001292008 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr12-5286 chr12 110793402 110793612 + 4.95 0.000 Intergenic AluSz|SINE|Alu -50616 NM_001244974 5501 Hs.79081 NM_002710 ENSG00000186298 PPP1CC PP-1G|PP1C|PPP1G protein phosphatase 1 catalytic subunit gamma protein-coding chr10-8530 chr10 92781939 92782149 + 4.95 0.000 Intergenic Intergenic -44787 NM_001013848 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr5-8422 chr5 127670295 127670505 + 4.95 0.000 Intergenic Intergenic 17385 NM_001127385 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding chr4-5448 chr4 25607433 25607643 + 4.95 0.000 Intergenic AluJb|SINE|Alu -38192 NR_134641 101929161 Hs.125638 NR_134641 LOC101929161 - uncharacterized LOC101929161 ncRNA chr10-8686 chr10 101302847 101303057 + 4.95 0.000 Intergenic Intergenic -39402 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr13-3042 chr13 28843659 28843869 + 4.95 0.000 intron (NM_001366651, intron 2 of 14) intron (NM_001366651, intron 2 of 14) 23425 NM_001366651 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr18-2845 chr18 7510183 7510393 + 4.95 0.000 Intergenic L2|LINE|L2 -49282 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr20-4116 chr20 41704635 41704845 + 4.95 0.000 Intergenic Intergenic -86363 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr11-7566 chr11 26338045 26338255 + 4.95 0.000 intron (NM_031418, intron 1 of 26) intron (NM_031418, intron 1 of 26) 6020 NM_031418 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr2-7941 chr2 60974881 60975091 + 4.95 0.000 intron (NM_144709, intron 4 of 17) MER52D|LTR|ERV1 42226 NM_001322124 150962 Hs.368348 NM_144709 ENSG00000162927 PUS10 CCDC139|DOBI pseudouridine synthase 10 protein-coding chr12-7156 chr12 48452244 48452454 + 4.95 0.000 Intergenic L1PA11|LINE|L1 -20316 NM_012404 23519 Hs.532658 NM_012404 ENSG00000139223 ANP32D PP32R2 acidic nuclear phosphoprotein 32 family member D protein-coding chr16-5897 chr16 2309297 2309507 + 4.95 0.000 intron (NM_001089, intron 10 of 32) L2a|LINE|L2 31326 NM_001089 21 Hs.26630 NM_001089 ENSG00000167972 ABCA3 ABC-C|ABC3|EST111653|LBM180|SMDP3 ATP binding cassette subfamily A member 3 protein-coding chr4-3099 chr4 153633313 153633523 + 4.95 0.000 intron (NM_001131007, intron 32 of 34) AluJr|SINE|Alu -6750 NR_134873 100419170 Hs.382102 NR_134873 ENSG00000250771 LOC100419170 - toll like receptor 2 pseudogene pseudo chrX-4822 chrX 101937699 101937909 + 4.95 0.000 Intergenic Intergenic -5777 NM_001011657 84460 Hs.496512 NM_001011657 ENSG00000166432 ZMAT1 - zinc finger matrin-type 1 protein-coding chr19-6250 chr19 7159198 7159408 + 4.95 0.000 intron (NM_001079817, intron 9 of 20) L1MB3|LINE|L1 89600 NM_001044387 79230 Hs.591380 NM_024341 ENSG00000130544 ZNF557 - zinc finger protein 557 protein-coding chr18-2413 chr18 9720002 9720212 + 4.95 0.000 intron (NM_006868, intron 1 of 6) AluSz|SINE|Alu 11806 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr2-9751 chr2 82171573 82171783 + 4.95 0.000 Intergenic AluJb|SINE|Alu -685125 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr6-4661 chr6 52102238 52102448 + 4.95 0.000 Intergenic Intergenic -14730 NM_170724 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding chr12-6185 chr12 16948947 16949157 + 4.95 0.000 Intergenic Intergenic -39695 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo chr2-10604 chr2 3701516 3701726 + 4.95 0.000 exon (NM_018436, exon 11 of 12) exon (NM_018436, exon 11 of 12) -1954 NM_001287444 728597 Hs.304233 NM_001287444 ENSG00000214866 DCDC2C - doublecortin domain containing 2C protein-coding chr7-7546 chr7 113312003 113312213 + 4.95 0.000 Intergenic MIR|SINE|MIR -193526 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding chr16-6637 chr16 68219903 68220113 + 4.95 0.000 intron (NM_004555, intron 10 of 10) intron (NM_004555, intron 10 of 10) 13491 NR_106831 102466194 NR_106831 ENSG00000284259 MIR6773 hsa-mir-6773 microRNA 6773 ncRNA chr1-13578 chr1 8260728 8260938 + 4.95 0.000 Intergenic AluSq2|SINE|Alu 52161 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr17-5863 chr17 67980861 67981071 + 4.95 0.000 intron (NM_182641, intron 27 of 27) AluJb|SINE|Alu 12640 NM_181655 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr10-6184 chr10 21181165 21181375 + 4.95 0.000 Intergenic AluSp|SINE|Alu 6968 NR_046284 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA chr3-10493 chr3 135570688 135570898 + 4.95 0.000 Intergenic Intergenic -394935 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chrX-2101 chrX 24395907 24396117 + 4.95 0.000 Intergenic Intergenic 33329 NM_001136234 100130302 Hs.717243 NM_001136234 SUPT20HL1 FAM48B1|SPT20L SUPT20H like 1 protein-coding chr9-5295 chr9 85006341 85006551 + 4.95 0.000 intron (NM_001018064, intron 16 of 17) intron (NM_001018064, intron 16 of 17) 300545 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr5-7873 chr5 73205283 73205493 + 4.95 0.000 Intergenic Intergenic -3427 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr14-4039 chr14 54478298 54478508 + 4.95 0.000 intron (NM_004124, intron 6 of 6) intron (NM_004124, intron 6 of 6) 10577 NM_004124 2764 Hs.151413 NM_004124 ENSG00000197045 GMFB GMF glia maturation factor beta protein-coding chr3-8174 chr3 38311056 38311266 + 4.95 0.000 intron (NM_004803, intron 4 of 9) intron (NM_004803, intron 4 of 9) 5225 NM_004803 9389 Hs.165559 NM_004803 ENSG00000144671 SLC22A14 OCTL2|OCTL4|ORCTL4 solute carrier family 22 member 14 protein-coding chr8-6326 chr8 48945085 48945295 + 4.95 0.000 Intergenic L1P2|LINE|L1 -23761 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr4-6415 chr4 126559528 126559738 + 4.95 0.000 Intergenic Intergenic 1052374 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr7-9007 chr7 100859082 100859292 + 4.95 0.000 intron (NM_001363494, intron 4 of 10) intron (NM_001363494, intron 4 of 10) 6468 NM_001267812 56996 Hs.521087 NM_020246 ENSG00000146828 SLC12A9 CCC6|CIP1|WO3.3|hCCC6 solute carrier family 12 member 9 protein-coding chr15-3988 chr15 50404733 50404943 + 4.95 0.000 Intergenic L2|LINE|L2 -19567 NM_001283049 9101 Hs.443731 NM_005154 ENSG00000138592 USP8 HumORF8|PITA4|SPG59|UBPY ubiquitin specific peptidase 8 protein-coding chr1-14888 chr1 82029395 82029605 + 4.95 0.000 Intergenic Intergenic 227047 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr2-10979 chr2 96390969 96391179 + 4.95 0.000 Intergenic AluJr4|SINE|Alu 55308 NM_015341 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr5-8018 chr5 88029357 88029567 + 4.95 0.000 Intergenic Intergenic 239383 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding chr12-8157 chr12 121313256 121313466 + 4.95 0.000 intron (NM_001137559, intron 15 of 16) L1MB5|LINE|L1 -15053 NM_006549 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr5-7355 chr5 18176762 18176972 + 4.95 0.000 Intergenic HERV16-int|LTR|ERVL 369593 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr4-4580 chr4 75706194 75706404 + 4.95 0.000 Intergenic AluJo|SINE|Alu -18223 NM_001290049 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr21-1741 chr21 34634026 34634236 + 4.95 0.000 Intergenic MER21A|LTR|ERVL -19018 NM_004414 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr12-3113 chr12 27940819 27941029 + 4.95 0.000 Intergenic Intergenic 29052 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr12-5415 chr12 121947729 121947939 + 4.95 0.000 intron (NM_001178003, intron 7 of 17) L1MEh|LINE|L1 29242 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr18-3366 chr18 58549784 58549994 + 4.95 0.000 intron (NM_052947, intron 4 of 12) intron (NM_052947, intron 4 of 12) -50731 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr2-2938 chr2 9625218 9625428 + 4.95 0.000 intron (NM_006826, intron 2 of 5) intron (NM_006826, intron 2 of 5) 5674 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr3-9431 chr3 48878680 48878890 + 4.95 0.000 intron (NM_000387, intron 4 of 8) AluSx1|SINE|Alu 20097 NM_000387 788 Hs.13845 NM_000387 ENSG00000178537 SLC25A20 CAC|CACT solute carrier family 25 member 20 protein-coding chr21-1409 chr21 46561243 46561453 + 4.95 0.000 intron (NM_015151, intron 33 of 37) intron (NM_015151, intron 33 of 37) 43734 NM_006272 6285 Hs.422181 NM_006272 ENSG00000160307 S100B NEF|S100|S100-B|S100beta S100 calcium binding protein B protein-coding chr2-13912 chr2 182240867 182241077 + 4.95 0.000 intron (NM_005019, intron 2 of 14) intron (NM_005019, intron 2 of 14) 1091 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr10-7276 chr10 129292899 129293109 + 4.95 0.000 Intergenic L1MA9|LINE|L1 -174237 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr11-8609 chr11 2078543 2078753 + 4.95 0.000 Intergenic L1PA5|LINE|L1 55561 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr6-3897 chr6 64477511 64477721 + 4.95 0.000 intron (NM_001292009, intron 26 of 43) intron (NM_001292009, intron 26 of 43) 670780 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA chr8-4727 chr8 141852071 141852281 + 4.95 0.000 Intergenic Intergenic -65863 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr14-4058 chr14 58441037 58441247 + 4.95 0.000 intron (NM_001244193, intron 1 of 26) L1MA9|LINE|L1 1461 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding chr10-7725 chr10 31134238 31134448 + 4.95 0.000 Intergenic CpG -53540 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr11-7686 chr11 67083531 67083741 + 4.95 0.000 Intergenic AluSx|SINE|Alu 26789 NM_001300886 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr4-8233 chr4 138805069 138805279 + 4.95 0.000 Intergenic Intergenic 207472 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr3-3291 chr3 137837942 137838152 + 4.95 0.000 Intergenic L2b|LINE|L2 66136 NR_109987 100507274 Hs.360349 NR_109987 ENSG00000239513 LINC01210 - long intergenic non-protein coding RNA 1210 ncRNA chr7-4831 chr7 101460181 101460391 + 4.95 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 97411 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr9-7323 chr9 12403180 12403390 + 4.95 0.000 Intergenic MIR|SINE|MIR -290100 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr6-4609 chr6 44655633 44655843 + 4.95 0.000 Intergenic Intergenic -103857 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chrX-1937 chrX 2996635 2996845 + 4.95 0.000 Intergenic AluJb|SINE|Alu -9873 NM_001011719 347527 Hs.351533 NM_001011719 ENSG00000205667 ARSH sulfatase arylsulfatase family member H protein-coding chrX-3289 chrX 104660910 104661120 + 4.95 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 94816 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr5-8315 chr5 116856274 116856484 + 4.95 0.000 Intergenic L1MEc|LINE|L1 -94170 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr5-7056 chr5 170329555 170329765 + 4.95 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat -1733 NR_108024 257358 Hs.249689 NM_001025454 LINC01366 - long intergenic non-protein coding RNA 1366 ncRNA chr1-12182 chr1 195101889 195102099 + 4.95 0.000 Intergenic Intergenic 986721 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr3-10203 chr3 120634836 120635046 + 4.95 0.000 intron (NM_000187, intron 12 of 13) intron (NM_000187, intron 12 of 13) 38605 NM_004547 4710 Hs.304613 NM_004547 ENSG00000065518 NDUFB4 B15|CI-B15 NADH:ubiquinone oxidoreductase subunit B4 protein-coding chr6-6797 chr6 4987190 4987400 + 4.95 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -16521 NR_126015 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr4-7846 chr4 102107234 102107444 + 4.95 0.000 Intergenic L1PA7|LINE|L1 216973 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr10-8058 chr10 65466722 65466932 + 4.95 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -104598 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr9-4502 chr9 38479470 38479680 + 4.95 0.000 Intergenic Intergenic -55121 NM_001007563 347252 Hs.349705 NM_001007563 ENSG00000137142 IGFBPL1 IGFBP-RP4|IGFBPRP4|bA113O24.1 insulin like growth factor binding protein like 1 protein-coding chr12-4355 chr12 3247962 3248172 + 4.95 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 118055 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr12-8341 chr12 131308500 131308710 + 4.95 0.000 Intergenic AluSx3|SINE|Alu -10633 NR_135045 107161159 Hs.730119 NR_135045 ENSG00000248703 LINC02415 - long intergenic non-protein coding RNA 2415 ncRNA chr16-4203 chr16 11954561 11954771 + 4.95 0.000 intron (NM_001355514, intron 3 of 8) AluY|SINE|Alu 9772 NM_001355514 729978 Hs.730028 NM_001355514 ENSG00000234719 NPIPB2 - nuclear pore complex interacting protein family, member B2 protein-coding chr19-6592 chr19 27858924 27859134 + 4.95 0.000 intron (NR_146734, intron 1 of 7) HSAT4|Satellite|centr -65089 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr1-13211 chr1 209534664 209534874 + 4.95 0.000 Intergenic Intergenic -48945 NM_020439 57172 Hs.199068 NM_020439 ENSG00000008118 CAMK1G CLICK3|CLICKIII|VWS1|dJ272L16.1 calcium/calmodulin dependent protein kinase IG protein-coding chr22-3860 chr22 33038248 33038458 + 4.95 0.000 intron (NM_003490, intron 1 of 13) intron (NM_003490, intron 1 of 13) 14191 NM_001369908 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr17-7749 chr17 34454164 34454374 + 4.95 0.000 Intergenic Intergenic -91036 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr12-7574 chr12 75903015 75903225 + 4.95 0.000 Intergenic Intergenic 128656 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr15-3559 chr15 33609521 33609731 + 4.95 0.000 intron (NM_001243996, intron 18 of 102) AluSz|SINE|Alu 298659 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr11-10756 chr11 133979753 133979963 + 4.95 0.000 Intergenic MamGypLTR1b|LTR|Gypsy -23062 NM_001277285 22997 Hs.204121 NM_014987 ENSG00000080854 IGSF9B - immunoglobulin superfamily member 9B protein-coding chr10-7455 chr10 7541516 7541726 + 4.95 0.000 Intergenic Intergenic 78052 NM_032817 80760 Hs.498586 NM_030569 ENSG00000123243 ITIH5 ITI-HC5|PP14776 inter-alpha-trypsin inhibitor heavy chain 5 protein-coding chr21-1828 chr21 40938507 40938717 + 4.95 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -91454 NM_001271534 1826 Hs.160418 NM_001389 ENSG00000171587 DSCAM CHD2|CHD2-42|CHD2-52 DS cell adhesion molecule protein-coding chrX-4437 chrX 54794841 54795051 + 4.95 0.000 intron (NM_198510, intron 2 of 12) intron (NM_198510, intron 2 of 12) 3309 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr2-13555 chr2 153912864 153913074 + 4.95 0.000 intron (NM_052917, intron 2 of 12) L1PREC2|LINE|L1 -31425 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr8-5422 chr8 31296519 31296729 + 4.95 0.000 Intergenic L2a|LINE|L2 -263268 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr3-9875 chr3 81307478 81307688 + 4.95 0.000 Intergenic Intergenic 313715 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA chr2-14473 chr2 224842122 224842332 + 4.95 0.000 intron (NM_001290263, intron 22 of 55) intron (NM_001290263, intron 22 of 55) 104822 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr1-13016 chr1 161962546 161962756 + 4.95 0.000 3' UTR (NM_007348, exon 16 of 16) 3' UTR (NM_007348, exon 16 of 16) 61814 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr8-6787 chr8 94805386 94805596 + 4.95 0.000 Intergenic MER70B|LTR|ERVL -17796 NM_017864 55656 Hs.727669 NM_017864 ENSG00000164941 INTS8 C8orf52|INT8 integrator complex subunit 8 protein-coding chrX-4393 chrX 51697839 51698049 + 4.95 0.000 Intergenic L1ME3A|LINE|L1 -12568 NM_001355277 389857 Hs.730388 NM_001355277 ENSG00000223591 CENPVL1 CENPVP1|PRR6L1 centromere protein V like 1 protein-coding chr6-7870 chr6 106864062 106864272 + 4.95 0.000 Intergenic MER52D|LTR|ERV1 -76626 NR_147986 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr3-11186 chr3 193080905 193081115 + 4.95 0.000 Intergenic MER115|DNA|hAT-Tip100 -160212 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr2-12720 chr2 80344018 80344228 + 4.95 0.000 intron (NM_001282599, intron 1 of 11) L2a|LINE|L2 30744 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr8-6350 chr8 52284627 52284837 + 4.95 0.000 intron (NR_148195, intron 2 of 3) L2|LINE|L2 -30240 NM_001352845 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr12-7465 chr12 64124757 64124967 + 4.95 0.000 intron (NM_001346201, intron 18 of 21) L1MD2|LINE|L1 97434 NM_152440 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chrX-2168 chrX 38516975 38517185 + 4.95 0.000 Intergenic AluJr|SINE|Alu -44398 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr13-3149 chr13 94381399 94381609 + 4.95 0.000 intron (NM_005708, intron 6 of 8) MLT1B|LTR|ERVL-MaLR 98178 NM_001922 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr13-3106 chr13 56811480 56811690 + 4.95 0.000 Intergenic L1PB3|LINE|L1 -329333 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr11-7908 chr11 131502697 131502907 + 4.95 0.000 intron (NM_001352003, intron 1 of 8) L2a|LINE|L2 38065 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr5-7064 chr5 171685846 171686056 + 4.95 0.000 Intergenic L2b|LINE|L2 -99921 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr1-14897 chr1 82734621 82734831 + 4.95 0.000 Intergenic Intergenic -168457 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr10-5621 chr10 95126545 95126755 + 4.95 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -57153 NM_001198853 1558 Hs.709188 NM_000770 ENSG00000138115 CYP2C8 CPC8|CYP2C8DM|CYPIIC8|MP-12/MP-20 cytochrome P450 family 2 subfamily C member 8 protein-coding chr16-4316 chr16 29613304 29613514 + 4.95 0.000 non-coding (NR_135317, exon 1 of 12) non-coding (NR_135317, exon 1 of 12) 308 NR_135317 440354 Hs.552700 NR_002473 SMG1P2 - SMG1 pseudogene 2 pseudo chr8-6629 chr8 77378767 77378977 + 4.95 0.000 Intergenic Intergenic -71825 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA chr3-9311 chr3 43919540 43919750 + 4.95 0.000 Intergenic Intergenic -194567 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr3-5196 chr3 71868841 71869051 + 4.95 0.000 Intergenic L1ME1|LINE|L1 -83798 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr6-5603 chr6 41158452 41158662 + 4.95 0.000 TTS (NM_018965) TTS (NM_018965) -4208 NM_001271808 340205 Hs.117331 NM_178174 ENSG00000161911 TREML1 GLTL1825|PRO3438|TLT-1|TLT1|dJ238O23.3 triggering receptor expressed on myeloid cells like 1 protein-coding chr11-5661 chr11 127251817 127252027 + 4.95 0.000 Intergenic Intergenic -19148 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr1-16712 chr1 247120092 247120302 + 4.95 0.000 Intergenic Intergenic -7780 NM_207401 388759 Hs.456511 NM_207401 C1orf229 - chromosome 1 open reading frame 229 protein-coding chr8-4957 chr8 120318725 120318935 + 4.95 0.000 intron (NM_021110, intron 40 of 47) intron (NM_021110, intron 40 of 47) 126320 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr8-7385 chr8 138905690 138905900 + 4.95 0.000 intron (NM_152888, intron 1 of 64) L2c|LINE|L2 8246 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr5-6474 chr5 176373498 176373708 + 4.95 0.000 3' UTR (NM_173664, exon 4 of 4) 3' UTR (NM_173664, exon 4 of 4) 5657 NR_031569 100302203 NR_031569 ENSG00000221464 MIR1271 MIRN1271|hsa-mir-1271 microRNA 1271 ncRNA chr4-7840 chr4 101730547 101730757 + 4.95 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -59955 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr10-7803 chr10 37713792 37714002 + 4.95 0.000 Intergenic L1MD1|LINE|L1 81278 NR_051997 100419868 Hs.741719 NR_051997 ZNF33BP1 - zinc finger protein 33B pseudogene 1 pseudo chr2-7018 chr2 149898065 149898275 + 4.95 0.000 Intergenic HERV16-int|LTR|ERVL -38979 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr6-6346 chr6 56104817 56105027 + 4.95 0.000 intron (NM_030820, intron 16 of 29) intron (NM_030820, intron 16 of 29) -13260 NM_001318754 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr14-4410 chr14 30877337 30877547 + 4.95 0.000 intron (NR_038356, intron 4 of 4) intron (NR_038356, intron 4 of 4) 2883 NM_004086 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding chr9-5685 chr9 124065425 124065635 + 4.95 0.000 Intergenic Intergenic 53762 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr12-7818 chr12 99574342 99574552 + 4.95 0.000 intron (NM_152788, intron 9 of 25) L1MD|LINE|L1 -73306 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr22-3007 chr22 20655911 20656121 + 4.95 0.000 Intergenic AluSp|SINE|Alu -33539 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin like 4, pseudogene pseudo chr14-4926 chr14 73897898 73898108 + 4.95 0.000 intron (NR_040251, intron 4 of 11) intron (NR_040251, intron 4 of 11) 11144 NM_021188 57862 Hs.270869 NM_021188 ENSG00000119725 ZNF410 APA-1|APA1 zinc finger protein 410 protein-coding chr5-7198 chr5 6776499 6776709 + 4.95 0.000 Intergenic Intergenic -19276 NR_146281 109729133 Hs.582455 NR_146281 ENSG00000251365 LINC02236 - long intergenic non-protein coding RNA 2236 ncRNA KI270832.1-4 KI270832.1 172686 172896 + 4.95 0.000 NA NA NA NA chr5-6609 chr5 36518096 36518306 + 4.95 0.000 Intergenic L1PA15|LINE|L1 -88154 NM_001289939 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr11-8424 chr11 104371843 104372053 + 4.95 0.000 Intergenic L1MC3|LINE|L1 -207801 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr18-2023 chr18 44628123 44628333 + 4.95 0.000 Intergenic Intergenic -51845 NM_001130110 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr4-4704 chr4 87898506 87898716 + 4.95 0.000 Intergenic Intergenic 63908 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr7-9130 chr7 108269095 108269305 + 4.95 0.000 intron (NM_001371141, intron 3 of 29) MER96B|DNA|hAT-Tip100 -25815 NM_001371181 chr22-3222 chr22 40510243 40510453 + 4.95 0.000 intron (NM_020831, intron 3 of 14) intron (NM_020831, intron 3 of 14) -11452 NR_109965 101927257 Hs.662725 NR_109965 ENSG00000232564 MRTFA-AS1 - MRTFA antisense RNA 1 ncRNA chr6-7058 chr6 27479488 27479698 + 4.95 0.000 Intergenic Intergenic -6475 NM_007149 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding chr4-6219 chr4 56905488 56905698 + 4.95 0.000 Intergenic AluSp|SINE|Alu -2307 NM_005612 5978 Hs.307836 NM_005612 ENSG00000084093 REST DFNA27|GINGF5|HGF5|NRSF|WT6|XBR RE1 silencing transcription factor protein-coding chr1-16275 chr1 212845076 212845286 + 4.95 0.000 intron (NM_001024601, intron 1 of 2) HERVH-int|LTR|ERV1 2468 NM_001024601 149643 Hs.153274 NM_001024601 ENSG00000185523 SPATA45 C1orf227 spermatogenesis associated 45 protein-coding chr8-4801 chr8 4152507 4152717 + 4.95 0.000 intron (NM_033225, intron 3 of 69) AluJo|SINE|Alu 842302 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr7-7582 chr7 124193392 124193602 + 4.95 0.000 Intergenic MLT2A2|LTR|ERVL 158599 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr6-3581 chr6 71847834 71848044 + 4.95 0.000 Intergenic Intergenic -38764 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr11-9271 chr11 44486822 44487032 + 4.95 0.000 Intergenic MER48|LTR|ERV1 -78736 NM_001024844 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr6-7549 chr6 70862296 70862506 + 4.95 0.000 TTS (NM_001281439) TTS (NM_001281439) 94659 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr11-9299 chr11 45355871 45356081 + 4.95 0.000 non-coding (NR_120557, exon 2 of 2) non-coding (NR_120557, exon 2 of 2) 605 NR_120557 101928812 Hs.444059 NR_120557 ENSG00000254427 LINC02696 - long intergenic non-protein coding RNA 2696 ncRNA chr10-9042 chr10 123918866 123919076 + 4.95 0.000 Intergenic L1MD2|LINE|L1 -27164 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr11-7613 chr11 46174832 46175042 + 4.95 0.000 intron (NR_120565, intron 2 of 2) AluJb|SINE|Alu 2982 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chr10-7538 chr10 14612246 14612456 + 4.95 0.000 intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) -7950 NM_001282697 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr20-3015 chr20 49008581 49008791 + 4.95 0.000 intron (NM_006420, intron 26 of 38) intron (NM_006420, intron 26 of 38) 37370 NR_110625 102723483 Hs.209000 NR_110624 ENSG00000227431 CSE1L-AS1 - CSE1L antisense RNA 1 ncRNA chr11-10748 chr11 133522027 133522237 + 4.95 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) 10369 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr18-2965 chr18 22325532 22325742 + 4.95 0.000 Intergenic Intergenic 92278 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T cell lymphoma-associated antigen 1 protein-coding chr5-7998 chr5 85438961 85439171 + 4.95 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -843378 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr8-6150 chr8 31137665 31137875 + 4.95 0.000 intron (NM_000553, intron 24 of 34) (TG)n|Simple_repeat|Simple_repeat -104414 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr6-3536 chr6 38972791 38973001 + 4.95 0.000 intron (NM_001371, intron 82 of 91) intron (NM_001371, intron 82 of 91) -19789 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr10-8000 chr10 61058723 61058933 + 4.95 0.000 Intergenic Intergenic 42553 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chrX-3203 chrX 47166338 47166548 + 4.95 0.000 intron (NM_152856, intron 2 of 22) L1ME4b|LINE|L1 21222 NM_005676 8241 Hs.401509 NM_005676 ENSG00000182872 RBM10 DXS8237E|GPATC9|GPATCH9|S1-1|TARPS|ZRANB5 RNA binding motif protein 10 protein-coding chr5-3820 chr5 97370342 97370552 + 4.95 0.000 Intergenic Intergenic -134249 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr22-2365 chr22 44798632 44798842 + 4.95 0.000 intron (NM_181335, intron 2 of 11) MER3|DNA|hAT-Charlie 46179 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr9-6295 chr9 135583572 135583782 + 4.95 0.000 intron (NR_109814, intron 3 of 3) intron (NR_109814, intron 3 of 3) 8752 NR_034017 100130954 Hs.550769 NR_034016 ENSG00000237339 LINC01502 - long intergenic non-protein coding RNA 1502 ncRNA chr1-8135 chr1 10950857 10951067 + 4.95 0.000 intron (NM_001366227, intron 8 of 10) MER102c|DNA|hAT-Charlie 15725 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr9-4853 chr9 951963 952173 + 4.95 0.000 intron (NM_001363767, intron 4 of 4) MIRb|SINE|MIR -24587 NM_021240 58524 Hs.189174 NM_021240 ENSG00000064218 DMRT3 DMRTA3 doublesex and mab-3 related transcription factor 3 protein-coding chr20-3603 chr20 5239254 5239464 + 4.95 0.000 Intergenic L1PA7|LINE|L1 77373 NM_144773 128674 Hs.375029 NM_144773 ENSG00000101292 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding chr8-4909 chr8 92189605 92189815 + 4.95 0.000 Intergenic Intergenic -86325 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr5-6519 chr5 4709682 4709892 + 4.95 0.000 Intergenic L1PA7|LINE|L1 -63694 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA chr15-4356 chr15 41079808 41080018 + 4.95 0.000 intron (NM_017553, intron 8 of 35) intron (NM_017553, intron 8 of 35) 36333 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr1-15434 chr1 153367550 153367760 + 4.95 0.000 Intergenic Intergenic 7966 NM_005621 6283 Hs.19413 NM_005621 ENSG00000163221 S100A12 CAAF1|CAGC|CGRP|ENRAGE|MRP-6|MRP6|p6 S100 calcium binding protein A12 protein-coding chr13-2692 chr13 89998091 89998301 + 4.95 0.000 Intergenic Intergenic 121521 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr17-7941 chr17 45112296 45112506 + 4.95 0.000 3' UTR (NM_133373, exon 15 of 15) 3' UTR (NM_133373, exon 15 of 15) 2032 NR_106842 102465470 NR_106842 ENSG00000277249 MIR6784 hsa-mir-6784 microRNA 6784 ncRNA chr4-7216 chr4 42293906 42294116 + 4.95 0.000 Intergenic Intergenic 97257 NR_134668 105374428 Hs.245131 NR_134668 ENSG00000250781 LOC105374428 - uncharacterized LOC105374428 ncRNA chr3-10492 chr3 135542082 135542292 + 4.95 0.000 Intergenic L1MC3|LINE|L1 -423541 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr7-9044 chr7 102304827 102305037 + 4.95 0.000 intron (NM_020979, intron 2 of 8) intron (NM_020979, intron 2 of 8) 11829 NR_036245 100422858 NR_036245 ENSG00000264675 MIR4285 - microRNA 4285 ncRNA chr16-6500 chr16 59347014 59347224 + 4.95 0.000 Intergenic Intergenic 408072 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr11-9972 chr11 77279109 77279319 + 4.95 0.000 intron (NM_182833, intron 4 of 16) intron (NM_182833, intron 4 of 16) 22452 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr7-5970 chr7 101232570 101232780 + 4.95 0.000 exon (NM_001185080, exon 5 of 6) exon (NM_001185080, exon 5 of 6) 5127 NM_014343 24146 Hs.38738 NM_014343 ENSG00000106404 CLDN15 - claudin 15 protein-coding chr5-7547 chr5 38471823 38472033 + 4.95 0.000 Intergenic Intergenic 26382 NM_182801 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr7-6998 chr7 118332034 118332244 + 4.95 0.000 Intergenic MLT2B3|LTR|ERVL 107435 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding chr17-7495 chr17 16698752 16698962 + 4.95 0.000 intron (NM_014695, intron 2 of 17) intron (NM_014695, intron 2 of 17) 8616 NR_130142 9720 Hs.745246 NM_014695 ENSG00000170160 CCDC144A - coiled-coil domain containing 144A protein-coding chr6-4874 chr6 89536419 89536629 + 4.95 0.000 intron (NM_001242809, intron 1 of 15) intron (NM_001242809, intron 1 of 15) -25794 NM_001242811 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr4-4246 chr4 18436298 18436508 + 4.95 0.000 Intergenic Intergenic -414528 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr2-9361 chr2 227895533 227895743 + 4.95 0.000 intron (NM_178821, intron 5 of 12) intron (NM_178821, intron 5 of 12) 24007 NM_178821 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr4-8501 chr4 160407285 160407495 + 4.95 0.000 Intergenic Intergenic -629606 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr3-9348 chr3 46507837 46508047 + 4.95 0.000 Intergenic Intergenic 9966 NM_031440 83597 Hs.196584 NM_031440 ENSG00000163825 RTP3 LTM1|TMEM7|Z3CXXC3 receptor transporter protein 3 protein-coding chr1-14741 chr1 67276970 67277180 + 4.95 0.000 Intergenic L1PA7|LINE|L1 -30289 NM_001258216 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr6-4640 chr6 47895938 47896148 + 4.95 0.000 intron (NM_001013732, intron 2 of 2) intron (NM_001013732, intron 2 of 2) 108975 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr12-6607 chr12 127473335 127473545 + 4.95 0.000 Intergenic Intergenic -133368 NR_110057 101927616 Hs.637827 NR_110057 ENSG00000256362 LINC02375 - long intergenic non-protein coding RNA 2375 ncRNA chr14-5336 chr14 102827075 102827285 + 4.95 0.000 intron (NM_001199427, intron 1 of 7) intron (NM_001199427, intron 1 of 7) 49701 NM_145726 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr18-1676 chr18 70288356 70288566 + 4.95 0.000 promoter-TSS (NM_004232) promoter-TSS (NM_004232) -584 NM_004232 9306 Hs.44439 NM_004232 ENSG00000170677 SOCS6 CIS-4|CIS4|HSPC060|SOCS-4|SOCS-6|SOCS4|SSI4|STAI4|STATI4 suppressor of cytokine signaling 6 protein-coding chr4-3668 chr4 34087567 34087777 + 4.95 0.000 Intergenic AluSx|SINE|Alu -47779 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr8-4431 chr8 110536620 110536830 + 4.95 0.000 Intergenic L2a|LINE|L2 490708 NR_125416 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chrX-3757 chrX 129173619 129173829 + 4.95 0.000 Intergenic L1MA2|LINE|L1 349766 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr14-4296 chr14 20848499 20848709 + 4.95 0.000 Intergenic Intergenic -42799 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding chr2-12805 chr2 88603533 88603743 + 4.95 0.000 intron (NM_004836, intron 2 of 16) intron (NM_004836, intron 2 of 16) 21291 NM_001313915 9451 Hs.591589 NM_004836 ENSG00000172071 EIF2AK3 PEK|PERK|WRS eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding chr11-6913 chr11 107805654 107805864 + 4.95 0.000 intron (NM_017515, intron 4 of 7) AluSx1|SINE|Alu 53028 NM_017515 54733 Hs.524014 NM_017515 ENSG00000110660 SLC35F2 HSNOV1 solute carrier family 35 member F2 protein-coding chr2-13597 chr2 158107357 158107567 + 4.95 0.000 intron (NM_173355, intron 2 of 6) MIRc|SINE|MIR 5592 NM_173355 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr20-4252 chr20 48831601 48831811 + 4.95 0.000 Intergenic Intergenic -3707 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr1-13511 chr1 5497791 5498001 + 4.95 0.000 Intergenic Intergenic 364845 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr1-16613 chr1 238581490 238581700 + 4.95 0.000 Intergenic L2a|LINE|L2 -95578 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr12-8058 chr12 115973145 115973355 + 4.95 0.000 intron (NM_015335, intron 25 of 30) intron (NM_015335, intron 25 of 30) 175404 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr8-5730 chr8 134977606 134977816 + 4.95 0.000 Intergenic Intergenic 127776 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr2-12628 chr2 72819667 72819877 + 4.95 0.000 intron (NR_135774, intron 1 of 19) A-rich|Low_complexity|Low_complexity 6261 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr17-3509 chr17 58339112 58339322 + 4.95 0.000 intron (NR_038418, intron 2 of 3) intron (NR_038418, intron 2 of 3) 2015 NR_038416 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr12-5192 chr12 104975565 104975775 + 4.95 0.000 Intergenic MER20|DNA|hAT-Charlie -10646 NM_152318 121053 Hs.295563 NM_152318 ENSG00000151131 C12orf45 - chromosome 12 open reading frame 45 protein-coding chr11-7831 chr11 112586663 112586873 + 4.95 0.000 Intergenic Intergenic -30966 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr17-6455 chr17 15004794 15005004 + 4.95 0.000 Intergenic Intergenic -9906 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 - uncharacterized LOC101928475 ncRNA chr17-7034 chr17 60110017 60110227 + 4.95 0.000 Intergenic AluSz|SINE|Alu -7203 NR_027408 653653 Hs.631741 NR_027408 ENSG00000280852 LOC653653 - adaptor related protein complex 1 sigma 2 subunit pseudogene pseudo chr22-2551 chr22 26273528 26273738 + 4.95 0.000 intron (NM_001184776, intron 1 of 14) intron (NM_001184776, intron 1 of 14) 104159 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr2-14060 chr2 196948377 196948587 + 4.95 0.000 Intergenic AluJo|SINE|Alu -21775 NM_001321100 80055 Hs.229988 NM_024989 ENSG00000197121 PGAP1 Bst1|ISPD3024|MRT42|SPG67 post-GPI attachment to proteins 1 protein-coding chr2-13829 chr2 176091200 176091410 + 4.95 0.000 Intergenic Intergenic -1416 NM_000523 3239 Hs.152414 NM_000523 ENSG00000128714 HOXD13 BDE|BDSD|HOX4I|SPD|SPD1 homeobox D13 protein-coding chr15-3932 chr15 38686660 38686870 + 4.95 0.000 Intergenic MIRc|SINE|MIR -9833 NR_160786 chr5-7623 chr5 45820449 45820659 + 4.95 0.000 Intergenic HAL1|LINE|L1 -124174 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr7-7996 chr7 16159036 16159246 + 4.95 0.000 intron (NM_001101426, intron 9 of 9) AluSx|SINE|Alu -51345 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA chr5-8827 chr5 150653187 150653397 + 4.95 0.000 TTS (NM_001166209) TTS (NM_001166209) -7549 NM_133371 91977 Hs.91626 NM_133371 ENSG00000164591 MYOZ3 CS-3|CS3|FATZ-3|FRP3 myozenin 3 protein-coding chr2-6103 chr2 199457109 199457319 + 4.95 0.000 intron (NM_015265, intron 2 of 11) CpG-16887 725 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr10-8773 chr10 104836412 104836622 + 4.95 0.000 intron (NM_014978, intron 1 of 26) intron (NM_014978, intron 1 of 26) -170301 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr17-7422 chr17 10260375 10260585 + 4.95 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -61874 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr16-2636 chr16 20715754 20715964 + 4.95 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -18071 NM_001318890 116285 Hs.306812 NM_052956 ENSG00000166743 ACSM1 BUCS1|MACS1 acyl-CoA synthetase medium chain family member 1 protein-coding chr5-3599 chr5 104285915 104286125 + 4.95 0.000 Intergenic MER81|DNA|hAT-Blackjack -723231 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr2-5331 chr2 84888934 84889144 + 4.95 0.000 Intergenic L2b|LINE|L2 -7955 NM_001307978 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr4-7775 chr4 95161099 95161309 + 4.95 0.000 Intergenic Intergenic 69713 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr11-10488 chr11 118211122 118211332 + 4.95 0.000 intron (NM_001098526, intron 3 of 9) intron (NM_001098526, intron 3 of 9) 1719 NM_153206 120425 Hs.16291 NM_153206 ENSG00000160593 JAML AMICA|AMICA1|CREA7-1|CREA7-4|Gm638 junction adhesion molecule like protein-coding chr2-11985 chr2 27346243 27346453 + 4.95 0.000 intron (NM_001035521, intron 1 of 18) AluJb|SINE|Alu 10144 NM_001318909 2976 Hs.75782 NM_001521 ENSG00000115207 GTF3C2 TFIIIC-BETA|TFIIIC110 general transcription factor IIIC subunit 2 protein-coding chr21-1519 chr21 44534011 44534221 + 4.95 0.000 intron (NM_144991, intron 2 of 11) intron (NM_144991, intron 2 of 11) 6079 NM_198691 386677 Hs.688631 NM_198691 ENSG00000215455 KRTAP10-1 KAP10.1|KAP18-1|KAP18.1|KRTAP10.1|KRTAP18-1|KRTAP18.1 keratin associated protein 10-1 protein-coding chrX-4485 chrX 64176828 64177038 + 4.95 0.000 Intergenic MIRc|SINE|MIR 28775 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding chr5-6569 chr5 18145848 18146058 + 4.95 0.000 Intergenic THE1C|LTR|ERVL-MaLR 338679 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr15-4006 chr15 57281111 57281321 + 4.95 0.000 intron (NM_207038, intron 18 of 19) intron (NM_207038, intron 18 of 19) -2559 NR_145748 109616990 NR_145748 ENSG00000239035 SNORD13D - small nucleolar RNA, C/D box 13D snoRNA chr2-13466 chr2 146508029 146508239 + 4.95 0.000 Intergenic Intergenic -78923 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr11-10742 chr11 133053753 133053963 + 4.95 0.000 intron (NM_001012393, intron 1 of 7) L2a|LINE|L2 -110090 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr11-9868 chr11 73549477 73549687 + 4.95 0.000 intron (NM_001286051, intron 1 of 5) L2c|LINE|L2 48530 NM_015159 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr8-3244 chr8 143252658 143252868 + 4.95 0.000 intron (NM_173832, intron 2 of 2) intron (NM_173832, intron 2 of 2) 5824 NM_173832 286128 Hs.668016 NM_173832 ENSG00000181638 ZFP41 ZNF753|zfp-41 ZFP41 zinc finger protein protein-coding chr5-5928 chr5 66499114 66499324 + 4.95 0.000 Intergenic Intergenic 12385 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr9-7371 chr9 16977370 16977580 + 4.95 0.000 Intergenic SVA_D|Retroposon|SVA -106805 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr11-4571 chr11 125802288 125802498 + 4.95 0.000 Intergenic L1M2|LINE|L1 14266 NM_001129883 100169851 Hs.131278 NM_001129883 ENSG00000236027 PATE3 HEL-127|PATE-DJ prostate and testis expressed 3 protein-coding chr4-8216 chr4 136265111 136265321 + 4.95 0.000 Intergenic AluSq2|SINE|Alu -351536 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr1-16612 chr1 238459032 238459242 + 4.95 0.000 Intergenic Intergenic 26880 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr2-10859 chr2 62211229 62211439 + 4.95 0.000 intron (NM_006577, intron 1 of 1) AluJb|SINE|Alu -4187 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr2-14131 chr2 202503490 202503700 + 4.95 0.000 intron (NM_001204, intron 3 of 12) LTR12C|LTR|ERV1 127268 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr10-7653 chr10 25795849 25796059 + 4.95 0.000 Intergenic L1PA10|LINE|L1 137756 NR_120650 101929073 Hs.409816 NR_120650 ENSG00000226304 LOC101929073 - uncharacterized LOC101929073 ncRNA chr6-5775 chr6 366190 366400 + 4.95 0.000 Intergenic Intergenic -25457 NR_046000 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr1-16309 chr1 216196873 216197083 + 4.95 0.000 intron (NM_206933, intron 18 of 71) intron (NM_206933, intron 18 of 71) 124513 NR_125992 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr3-4677 chr3 46315742 46315952 + 4.95 0.000 Intergenic L1MD|LINE|L1 -37897 NM_001123041 729230 Hs.511794 NM_001123041 ENSG00000121807 CCR2 CC-CKR-2|CCR-2|CCR2A|CCR2B|CD192|CKR2|CKR2A|CKR2B|CMKBR2|MCP-1-R C-C motif chemokine receptor 2 protein-coding chr3-10080 chr3 108881221 108881431 + 4.95 0.000 Intergenic AluY|SINE|Alu 58540 NM_001317747 50852 Hs.138701 NM_016388 ENSG00000163519 TRAT1 HSPC062|TCRIM|TRIM|pp29/30 T cell receptor associated transmembrane adaptor 1 protein-coding chr2-7937 chr2 60600358 60600568 + 4.95 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -46809 NM_022893 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr5-4898 chr5 67901780 67901990 + 4.95 0.000 Intergenic Intergenic 108672 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA chr12-7358 chr12 56494552 56494762 + 4.95 0.000 Intergenic SVA_A|Retroposon|SVA -6243 NM_001280797 27165 Hs.212606 NM_013267 ENSG00000135423 GLS2 GA|GLS|LGA|hLGA glutaminase 2 protein-coding chr3-5496 chr3 193859449 193859659 + 4.95 0.000 Intergenic L1ME3Cz|LINE|L1 -15545 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr16-6524 chr16 62691097 62691307 + 4.95 0.000 Intergenic Intergenic -654764 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr11-7970 chr11 8429500 8429710 + 4.95 0.000 intron (NM_001352388, intron 13 of 14) intron (NM_001352388, intron 13 of 14) -160818 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr22-3022 chr22 25347689 25347899 + 4.95 0.000 Intergenic L1MD1|LINE|L1 14763 NM_182492 91355 Hs.634058 NM_182492 ENSG00000100068 LRP5L - LDL receptor related protein 5 like protein-coding chr19-4838 chr19 37810113 37810323 + 4.95 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -7193 NR_040013 644554 Hs.683930 NR_040013 LOC644554 - uncharacterized LOC644554 ncRNA chr6-7377 chr6 49503913 49504123 + 4.95 0.000 intron (NM_001010904, intron 1 of 5) HERVK11D-int|LTR|ERVK 4095 NM_001010904 389396 Hs.585172 NM_001010904 ENSG00000203972 GLYATL3 C6orf140|bA28H17.2 glycine-N-acyltransferase like 3 protein-coding chr5-3061 chr5 33250872 33251082 + 4.95 0.000 intron (NR_147008, intron 3 of 3) (T)n|Simple_repeat|Simple_repeat 21242 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr5-5911 chr5 43643521 43643731 + 4.95 0.000 intron (NM_012343, intron 7 of 21) intron (NM_012343, intron 7 of 21) -40396 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr2-7106 chr2 178127830 178128040 + 4.95 0.000 intron (NM_001365579, intron 9 of 9) intron (NM_001365579, intron 9 of 9) 15498 NM_001365578 129831 Hs.377257 NM_152945 ENSG00000155636 RBM45 DRB1|RB-1 RNA binding motif protein 45 protein-coding chr4-8005 chr4 116488602 116488812 + 4.95 0.000 Intergenic L1MA3|LINE|L1 188982 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chrX-4526 chrX 67502050 67502260 + 4.95 0.000 Intergenic Intergenic -41866 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chrX-3168 chrX 27345010 27345220 + 4.95 0.000 Intergenic L1MEf|LINE|L1 118226 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr8-7155 chr8 122562205 122562415 + 4.95 0.000 intron (NR_131202, intron 2 of 3) intron (NR_131202, intron 2 of 3) 6334 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chrX-2035 chrX 16897316 16897526 + 4.95 0.000 Intergenic Intergenic -27059 NM_002893 5931 Hs.495755 NM_002893 ENSG00000102054 RBBP7 RbAp46 RB binding protein 7, chromatin remodeling factor protein-coding chr8-6846 chr8 98901347 98901557 + 4.95 0.000 intron (NM_001256312, intron 1 of 12) intron (NM_001256312, intron 1 of 12) 41158 NM_001256312 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr17-7741 chr17 34110158 34110368 + 4.95 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 46543 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chrX-4127 chrX 26804610 26804820 + 4.95 0.000 Intergenic Intergenic 246378 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr11-7920 chr11 1096473 1096683 + 4.95 0.000 exon (NM_002457, exon 31 of 61) exon (NM_002457, exon 31 of 61) 21703 NM_002457 4583 Hs.315 NM_002457 MUC2 MLP|MUC-2|SMUC mucin 2, oligomeric mucus/gel-forming protein-coding chr11-7056 chr11 120171088 120171298 + 4.95 0.000 non-coding (NR_159965, exon 2 of 2) non-coding (NR_159965, exon 2 of 2) 2216 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chr4-7720 chr4 89728957 89729167 + 4.95 0.000 intron (NM_007308, intron 4 of 4) MER58C|DNA|hAT-Charlie -107339 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr14-5357 chr14 103187796 103188006 + 4.95 0.000 non-coding (NR_033938, exon 3 of 3) non-coding (NR_033938, exon 3 of 3) 1127 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr10-4573 chr10 107435832 107436042 + 4.95 0.000 Intergenic Intergenic -271231 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr1-12178 chr1 192020934 192021144 + 4.95 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -137423 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr9-8256 chr9 111772552 111772762 + 4.95 0.000 intron (NM_173521, intron 3 of 25) L1MA4|LINE|L1 10836 NM_173521 158401 Hs.428209 NM_173521 ENSG00000165181 SHOC1 C9orf84|ZIP2|ZIP2H shortage in chiasmata 1 protein-coding chr1-14600 chr1 54324274 54324484 + 4.95 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 82015 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr4-6744 chr4 5445465 5445675 + 4.95 0.000 intron (NM_001306082, intron 7 of 12) intron (NM_001306082, intron 7 of 12) -78999 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr10-8897 chr10 114322900 114323110 + 4.95 0.000 intron (NM_001351080, intron 5 of 18) intron (NM_001351080, intron 5 of 18) 81497 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr5-8168 chr5 103929358 103929568 + 4.95 0.000 Intergenic Intergenic -366674 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr20-4325 chr20 52842072 52842282 + 4.95 0.000 Intergenic Intergenic -130181 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr1-15649 chr1 164157014 164157224 + 4.95 0.000 Intergenic L2b|LINE|L2 -402241 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr21-1708 chr21 31617975 31618185 + 4.95 0.000 Intergenic MamRep137|DNA|TcMar-Tigger -41542 NM_000454 6647 Hs.443914 NM_000454 ENSG00000142168 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1 protein-coding chr9-7468 chr9 28147805 28148015 + 4.95 0.000 intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) 571395 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr15-4162 chr15 90972155 90972365 + 4.95 0.000 intron (NM_199413, intron 11 of 13) AluJb|SINE|Alu 5891 NR_051984 100507118 Hs.366401 NR_051984 ENSG00000258725 PRC1-AS1 - PRC1 antisense RNA 1 ncRNA chr16-7026 chr16 88099753 88099963 + 4.95 0.000 intron (NR_120310, intron 1 of 1) intron (NR_120310, intron 1 of 1) 1127 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr2-14450 chr2 223140072 223140282 + 4.95 0.000 Intergenic Intergenic 88247 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chrX-2759 chrX 129957353 129957563 + 4.95 0.000 Intergenic CpG -47730 NM_001184772 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr12-6346 chr12 56989847 56990057 + 4.95 0.000 Intergenic L1PB4|LINE|L1 -4540 NM_007264 11318 Hs.483909 NM_007264 ENSG00000166856 GPR182 7TMR|ADMR|AM-R|AMR|G10D|L1-R|gamrh|hrhAMR G protein-coupled receptor 182 protein-coding chr12-4558 chr12 27806550 27806760 + 4.95 0.000 Intergenic Intergenic 26422 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr8-6342 chr8 51489578 51489788 + 4.95 0.000 intron (NM_144651, intron 5 of 22) HAL1ME|LINE|L1 319762 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr10-6423 chr10 17598111 17598321 + 4.95 0.000 intron (NM_014241, intron 5 of 6) AluJb|SINE|Alu 19158 NM_014241 9200 Hs.114062 NM_014241 ENSG00000165996 HACD1 CAP|PTPLA 3-hydroxyacyl-CoA dehydratase 1 protein-coding chr5-5975 chr5 121612215 121612425 + 4.95 0.000 Intergenic L1MC3|LINE|L1 -239562 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr2-11252 chr2 173218862 173219072 + 4.95 0.000 intron (NM_016653, intron 11 of 19) intron (NM_016653, intron 11 of 19) 63069 NR_033882 339751 Hs.570083 NR_033882 ENSG00000238133 MAP3K20-AS1 MLK7-AS1 MAP3K20 antisense RNA 1 ncRNA chr19-6260 chr19 7506460 7506670 + 4.95 0.000 intron (NM_198534, intron 7 of 8) intron (NM_198534, intron 7 of 8) 9017 NM_198534 374877 Hs.631862 NM_198534 ENSG00000198723 TEX45 C19orf45 testis expressed 45 protein-coding chr15-3711 chr15 48292950 48293160 + 4.95 0.000 intron (NM_001184832, intron 24 of 26) AluSz|SINE|Alu -38040 NM_001330286 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr6-5386 chr6 152371185 152371395 + 4.95 0.000 intron (NM_182961, intron 59 of 145) THE1C|LTR|ERVL-MaLR -9240 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr5-6885 chr5 128895428 128895638 + 4.95 0.000 Intergenic L1MA2|LINE|L1 -69594 NM_001317984 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding chr6-8077 chr6 124619233 124619443 + 4.95 0.000 intron (NM_001300738, intron 4 of 7) intron (NM_001300738, intron 4 of 7) 336333 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr9-7734 chr9 74480807 74481017 + 4.95 0.000 intron (NR_125791, intron 3 of 4) intron (NR_125791, intron 3 of 4) -16423 NM_006914 6096 Hs.494178 NM_006914 ENSG00000198963 RORB EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 RAR related orphan receptor B protein-coding chr5-7013 chr5 156383737 156383947 + 4.95 0.000 intron (NM_001128209, intron 2 of 7) MamRep137|DNA|TcMar-Tigger 56678 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr6-7113 chr6 34964445 34964655 + 4.95 0.000 intron (NM_015245, intron 1 of 23) L1ME3G|LINE|L1 75295 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr2-12700 chr2 77540264 77540474 + 4.95 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -17936 NM_001282924 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr11-10255 chr11 101770074 101770284 + 4.95 0.000 Intergenic L1M6|LINE|L1 -144831 NM_001363543 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr6-6512 chr6 121444364 121444574 + 4.95 0.000 intron (NM_000165, intron 1 of 1) intron (NM_000165, intron 1 of 1) 8823 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr22-2150 chr22 40911898 40912108 + 4.95 0.000 intron (NM_022098, intron 6 of 9) Charlie1b|DNA|hAT-Charlie -39375 NM_014248 9978 Hs.474949 NM_014248 ENSG00000100387 RBX1 BA554C12.1|RNF75|ROC1 ring-box 1 protein-coding chr17-6711 chr17 80076573 80076783 + 4.95 0.000 intron (NM_017950, intron 10 of 19) Tigger1|DNA|TcMar-Tigger -22150 NR_039607 100616121 NR_039607 ENSG00000265561 MIR1268B - microRNA 1268b ncRNA chr1-11750 chr1 18734226 18734436 + 4.95 0.000 intron (NM_001135254, intron 7 of 8) intron (NM_001135254, intron 7 of 8) 103485 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr20-4415 chr20 59582993 59583203 + 4.95 0.000 intron (NM_001199505, intron 1 of 12) intron (NM_001199505, intron 1 of 12) 5589 NM_001199505 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr8-6797 chr8 95438469 95438679 + 4.95 0.000 intron (NR_038207, intron 2 of 2) L2a|LINE|L2 -169373 NM_177965 157657 Hs.548157 NM_177965 ENSG00000156172 C8orf37 BBS21|CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding chr8-7334 chr8 134294155 134294365 + 4.95 0.000 Intergenic L2a|LINE|L2 -303811 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr2-11375 chr2 211383848 211384058 + 4.95 0.000 exon (NM_005235, exon 28 of 28) exon (NM_005235, exon 28 of 28) 766382 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr21-1042 chr21 26104985 26105195 + 4.95 0.000 intron (NM_001136129, intron 1 of 14) (A)n|Simple_repeat|Simple_repeat 35300 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr18-1865 chr18 25462612 25462822 + 4.95 0.000 Intergenic L1PA8|LINE|L1 -110551 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr14-4291 chr14 20661294 20661504 + 4.95 0.000 Intergenic Intergenic -19708 NM_001001968 341799 Hs.513132 NM_001001968 ENSG00000181803 OR6S1 OR14-37|OR6S1Q olfactory receptor family 6 subfamily S member 1 protein-coding chr2-12901 chr2 99473313 99473523 + 4.95 0.000 intron (NR_135652, intron 1 of 21) intron (NR_135652, intron 1 of 21) 16599 NM_001321455 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr11-6815 chr11 93700937 93701147 + 4.95 0.000 intron (NM_033395, intron 15 of 29) intron (NM_033395, intron 15 of 29) -20472 NR_002569 619383 Hs.660668 NR_002569 ENSG00000254911 SCARNA9 Z32|mgU2-19/30 small Cajal body-specific RNA 9 ncRNA chr2-8481 chr2 126594901 126595111 + 4.95 0.000 Intergenic MLT2F|LTR|ERVL -60929 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr2-11239 chr2 168220768 168220978 + 4.95 0.000 intron (NM_013233, intron 1 of 17) intron (NM_013233, intron 1 of 17) 26722 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr16-7118 chr16 89731488 89731698 + 4.95 0.000 intron (NR_110129, intron 6 of 10) FRAM|SINE|Alu 10056 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr14-4395 chr14 29548907 29549117 + 4.95 0.000 Intergenic Intergenic 378084 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr4-7970 chr4 112976020 112976230 + 4.95 0.000 intron (NM_001354275, intron 2 of 43) intron (NM_001354275, intron 2 of 43) -73289 NM_001354236 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr12-4803 chr12 55699531 55699741 + 4.95 0.000 intron (NM_001367994, intron 4 of 23) intron (NM_001367994, intron 4 of 23) 8268 NM_001367994 3679 Hs.524484 NM_002206 ENSG00000135424 ITGA7 - integrin subunit alpha 7 protein-coding chr20-3287 chr20 8546444 8546654 + 4.95 0.000 intron (NM_182734, intron 3 of 32) intron (NM_182734, intron 3 of 32) -284636 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr17-5397 chr17 33241645 33241855 + 4.95 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 51238 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr4-8185 chr4 132084346 132084556 + 4.95 0.000 Intergenic MLT2A2|LTR|ERVL 319613 NR_125884 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr8-7336 chr8 134352961 134353171 + 4.95 0.000 Intergenic L1PA10|LINE|L1 -245005 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr5-7501 chr5 35385183 35385393 + 4.95 0.000 Intergenic L1PA13|LINE|L1 -154801 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr7-4439 chr7 120868353 120868563 + 4.95 0.000 Intergenic LTR47A2|LTR|ERVL -10314 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr7-6862 chr7 48522747 48522957 + 4.95 0.000 intron (NM_152701, intron 53 of 61) intron (NM_152701, intron 53 of 61) 351394 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr1-16687 chr1 245042650 245042860 + 4.95 0.000 intron (NM_032328, intron 3 of 7) intron (NM_032328, intron 3 of 7) -71886 NR_111907 101928068 Hs.134857 NR_111907 LOC101928068 - uncharacterized LOC101928068 ncRNA chr14-3721 chr14 22319602 22319812 + 4.95 0.000 Intergenic Intergenic 113046 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr7-8779 chr7 80729737 80729947 + 4.95 0.000 Intergenic Intergenic 83189 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding GL000194.1-11 GL000194.1 76309 76519 + 4.95 0.000 NA NA NA NA chr2-5569 chr2 170460311 170460521 + 4.95 0.000 intron (NM_001083615, intron 23 of 33) AluSg|SINE|Alu -109473 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr8-6898 chr8 101515311 101515521 + 4.95 0.000 intron (NM_001330593, intron 1 of 15) intron (NM_001330593, intron 1 of 15) 22977 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr6-5910 chr6 50543126 50543336 + 4.95 0.000 Intergenic Intergenic -170313 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr3-6992 chr3 169665668 169665878 + 4.95 0.000 Intergenic Intergenic -2061 NM_001205194 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr22-3114 chr22 19057398 19057608 + 4.95 0.000 intron (NM_001184781, intron 5 of 9) intron (NM_001184781, intron 5 of 9) -9128 NR_024157 25786 Hs.720269 NR_024157 ENSG00000273311 DGCR11 DGS-D DiGeorge syndrome critical region gene 11 ncRNA chr12-6806 chr12 11763890 11764100 + 4.95 0.000 intron (NM_001987, intron 2 of 7) MamTip2|DNA|hAT-Tip100 114141 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr5-7571 chr5 40497562 40497772 + 4.95 0.000 Intergenic MER5A1|DNA|hAT-Charlie -182248 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr2-8867 chr2 176045161 176045371 + 4.95 0.000 Intergenic AluSx|SINE|Alu 38696 NM_001080458 344191 Hs.452341 NM_001080458 ENSG00000174279 EVX2 EVX-2 even-skipped homeobox 2 protein-coding chr17-6526 chr17 34403389 34403599 + 4.95 0.000 Intergenic Intergenic -40261 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr2-8597 chr2 139721847 139722057 + 4.95 0.000 Intergenic Intergenic 824628 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr11-5509 chr11 84991440 84991650 + 4.95 0.000 intron (NM_001351274, intron 5 of 26) L1MD1|LINE|L1 -68124 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-7579 chr9 35976898 35977108 + 4.95 0.000 Intergenic L1M2|LINE|L1 -18849 NM_019897 56656 Hs.553540 NM_019897 ENSG00000278889 OR2S2 OR37A|OST715 olfactory receptor family 2 subfamily S member 2 (gene/pseudogene) protein-coding chr7-8262 chr7 37255957 37256167 + 4.95 0.000 intron (NM_001206480, intron 6 of 21) intron (NM_001206480, intron 6 of 21) 97606 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr3-6689 chr3 131840983 131841193 + 4.95 0.000 intron (NM_130808, intron 2 of 15) intron (NM_130808, intron 2 of 15) 144843 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr7-4993 chr7 157887533 157887743 + 4.95 0.000 intron (NM_130843, intron 11 of 21) intron (NM_130843, intron 11 of 21) 33053 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr19-5895 chr19 47339756 47339966 + 4.95 0.000 promoter-TSS (NM_001271750) promoter-TSS (NM_001271750) -626 NM_001271750 27202 Hs.534412 NM_018485 ENSG00000134830 C5AR2 C5L2|GPF77|GPR77 complement component 5a receptor 2 protein-coding chr4-6879 chr4 12365931 12366141 + 4.95 0.000 Intergenic HERVH-int|LTR|ERV1 142585 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr11-10433 chr11 116271589 116271799 + 4.95 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -367728 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr4-7743 chr4 92931303 92931513 + 4.95 0.000 intron (NM_001286838, intron 2 of 14) L1ME2|LINE|L1 627009 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr6-6136 chr6 165986227 165986437 + 4.95 0.000 intron (NR_026860, intron 1 of 1) intron (NR_026860, intron 1 of 1) -1219 NR_027284 441177 Hs.708964 NM_001013720 ENSG00000281832 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA chr18-2334 chr18 12708556 12708766 + 4.95 0.000 intron (NM_147163, intron 2 of 6) AluSp|SINE|Alu 5619 NM_020232 56984 Hs.464652 NM_020232 ENSG00000128789 PSMG2 CLAST3|HCCA3|HsT1707|MDS003|PAC2|TNFSF5IP1 proteasome assembly chaperone 2 protein-coding chrX-1813 chrX 95494343 95494553 + 4.95 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -431222 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr21-1458 chr21 32858938 32859148 + 4.95 0.000 Intergenic MER52D|LTR|ERV1 -45340 NM_019596 56245 Hs.517235 NM_019596 ENSG00000205929 C21orf62 B37|C21orf120|PRED81 chromosome 21 open reading frame 62 protein-coding chr7-6981 chr7 106977144 106977354 + 4.95 0.000 Intergenic MER102a|DNA|hAT-Charlie -67456 NM_002736 5577 Hs.433068 NM_002736 ENSG00000005249 PRKAR2B PRKAR2|RII-BETA protein kinase cAMP-dependent type II regulatory subunit beta protein-coding chr12-5889 chr12 54391329 54391539 + 4.95 0.000 promoter-TSS (NM_001130967) promoter-TSS (NM_001130967) -136 NM_001130967 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr6-8328 chr6 146328781 146328991 + 4.95 0.000 intron (NM_001278065, intron 4 of 9) intron (NM_001278065, intron 4 of 9) -214947 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chrX-4989 chrX 117616420 117616630 + 4.95 0.000 Intergenic L2a|LINE|L2 357213 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr19-6197 chr19 5516183 5516393 + 4.95 0.000 Intergenic MamGypLTR3a|LTR|Gypsy 51746 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr11-6792 chr11 89277946 89278156 + 4.95 0.000 intron (NM_000372, intron 3 of 4) L2c|LINE|L2 100176 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr21-1371 chr21 40266926 40267136 + 4.95 0.000 intron (NR_073202, intron 11 of 32) L1PB3|LINE|L1 -54600 NR_039917 100616148 NR_039917 ENSG00000263973 MIR4760 - microRNA 4760 ncRNA chr20-4385 chr20 57620773 57620983 + 4.95 0.000 promoter-TSS (NM_030776) promoter-TSS (NM_030776) -452 NM_001160418 81030 Hs.302123 NM_030776 ENSG00000124256 ZBP1 C20orf183|DAI|DLM-1|DLM1 Z-DNA binding protein 1 protein-coding chr2-12793 chr2 87486438 87486648 + 4.95 0.000 intron (NR_024204, intron 3 of 3) AluJb|SINE|Alu 16593 NR_146460 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr1-16183 chr1 206717399 206717609 + 4.95 0.000 intron (NM_004759, intron 1 of 9) L3|LINE|CR1 32599 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chrX-640 chrX 17299259 17299469 + 4.95 0.000 Intergenic Intergenic -75836 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr3-4939 chr3 5574179 5574389 + 4.95 0.000 Intergenic L2c|LINE|L2 -324029 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr4-6314 chr4 87662533 87662743 + 4.95 0.000 exon (NM_001079911, exon 5 of 5) exon (NM_001079911, exon 5 of 5) 12358 NM_004407 1758 Hs.652366 NM_004407 ENSG00000152592 DMP1 ARHP|ARHR|DMP-1 dentin matrix acidic phosphoprotein 1 protein-coding chr10-3762 chr10 123559395 123559605 + 4.95 0.000 Intergenic Intergenic -106855 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr10-7024 chr10 78410472 78410682 + 4.95 0.000 Intergenic Intergenic 143235 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr14-3918 chr14 101678756 101678966 + 4.95 0.000 Intergenic MER4-int|LTR|ERV1 -51576 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr8-3092 chr8 27928490 27928700 + 4.95 0.000 intron (NM_173833, intron 3 of 8) MIR|SINE|MIR -42479 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr5-5345 chr5 131065227 131065437 + 4.95 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 99924 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr2-13728 chr2 168092686 168092896 + 4.95 0.000 intron (NM_013233, intron 10 of 17) intron (NM_013233, intron 10 of 17) -151647 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr3-10108 chr3 112097610 112097820 + 4.95 0.000 intron (NM_024616, intron 2 of 5) intron (NM_024616, intron 2 of 5) 11380 NM_001171747 79669 Hs.434247 NM_024616 ENSG00000114529 C3orf52 TTMP chromosome 3 open reading frame 52 protein-coding chrX-3662 chrX 101931724 101931934 + 4.95 0.000 5' UTR (NM_001011657, exon 1 of 7) 5' UTR (NM_001011657, exon 1 of 7) 198 NM_001282400 84460 Hs.496512 NM_001011657 ENSG00000166432 ZMAT1 - zinc finger matrin-type 1 protein-coding chr3-10600 chr3 143714500 143714710 + 4.95 0.000 intron (NM_173653, intron 4 of 15) L2c|LINE|L2 133863 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr1-12040 chr1 112406099 112406309 + 4.95 0.000 intron (NM_018704, intron 1 of 5) MIR3|SINE|MIR 9990 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr10-8449 chr10 86453214 86453424 + 4.95 0.000 exon (NM_015045, exon 14 of 19) exon (NM_015045, exon 14 of 19) 68465 NM_001318328 23063 Hs.203099 NM_015045 ENSG00000062650 WAPL FOE|KIAA0261|WAPAL WAPL cohesin release factor protein-coding chr20-3488 chr20 60010149 60010359 + 4.95 0.000 intron (NM_021810, intron 5 of 5) intron (NM_021810, intron 5 of 5) 13880 NM_021810 60437 Hs.729046 NM_021810 ENSG00000124215 CDH26 VR20 cadherin 26 protein-coding chr2-11819 chr2 17615416 17615626 + 4.95 0.000 intron (NM_001366805, intron 2 of 2) intron (NM_001366805, intron 2 of 2) 74825 NM_003385 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr1-12835 chr1 92055802 92056012 + 4.95 0.000 intron (NM_173567, intron 6 of 6) intron (NM_173567, intron 6 of 6) 19565 NM_001287737 646817 NM_001287737 ENSG00000230667 SETSIP SETP18 SET like protein protein-coding chr12-5266 chr12 109768750 109768960 + 4.95 0.000 exon (NM_032829, exon 3 of 3) exon (NM_032829, exon 3 of 3) 4632 NR_026661 84983 Hs.675961 NM_032897 ENSG00000255650 FAM222A-AS1 - FAM222A antisense RNA 1 ncRNA chr2-11988 chr2 27397635 27397845 + 4.95 0.000 intron (NM_177983, intron 1 of 9) AluJo|SINE|Alu -4164 NR_002201 2498 Hs.658438 NR_002201 FTH1P3 FTHL3|FTHL3P ferritin heavy chain 1 pseudogene 3 pseudo chr7-8027 chr7 19119225 19119435 + 4.95 0.000 Intergenic Intergenic -1694 NM_000474 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr20-3216 chr20 57224266 57224476 + 4.95 0.000 intron (NM_001719, intron 2 of 6) intron (NM_001719, intron 2 of 6) 10675 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chrX-4737 chrX 92204421 92204631 + 4.95 0.000 intron (NM_032969, intron 3 of 5) THE1C-int|LTR|ERVL-MaLR 369065 NM_001168362 27328 Hs.655673 NM_014522 ENSG00000102290 PCDH11X PCDH-X|PCDH-Y|PCDH11|PCDH11Y|PCDH22|PCDHX|PPP1R119 protocadherin 11 X-linked protein-coding chr2-11874 chr2 23095208 23095418 + 4.95 0.000 Intergenic Intergenic -289866 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr6-5487 chr6 162773345 162773555 + 4.95 0.000 intron (NM_001080379, intron 1 of 4) intron (NM_001080379, intron 1 of 4) 45480 NM_001080379 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr3-9126 chr3 30961531 30961741 + 4.95 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -66975 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr8-7065 chr8 116094930 116095140 + 4.95 0.000 intron (NR_046215, intron 7 of 13) L2|LINE|L2 230024 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr12-8140 chr12 120711531 120711741 + 4.95 0.000 intron (NM_001080533, intron 1 of 4) intron (NM_001080533, intron 1 of 4) 1178 NM_001080533 84747 Hs.127610 NM_032661 ENSG00000175970 UNC119B POC7B unc-119 lipid binding chaperone B protein-coding chr8-7417 chr8 140210246 140210456 + 4.95 0.000 intron (NM_001160372, intron 17 of 22) MIRb|SINE|MIR -109816 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr10-7740 chr10 32581349 32581559 + 4.95 0.000 intron (NM_001321115, intron 17 of 43) (CTC)n|Simple_repeat|Simple_repeat 135314 NR_109826 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding chr20-3881 chr20 30921406 30921616 + 4.95 0.000 Intergenic CpG -336153 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr12-6195 chr12 21451396 21451606 + 4.95 0.000 intron (NM_001350913, intron 4 of 10) MIR|SINE|MIR 13586 NM_001350912 79912 Hs.709545 NM_024854 ENSG00000121350 PYROXD1 MFM8 pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding chr17-4378 chr17 20039135 20039345 + 4.95 0.000 intron (NM_001243439, intron 1 of 14) L1MDa|LINE|L1 29881 NM_001243439 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr17-8220 chr17 64344123 64344333 + 4.95 0.000 intron (NM_000442, intron 13 of 15) intron (NM_000442, intron 13 of 15) 46632 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr1-7338 chr1 7883794 7884004 + 4.95 0.000 Intergenic AluSp|SINE|Alu -30408 NM_021995 10911 Hs.715862 NM_006786 ENSG00000049247 UTS2 PRO1068|U-II|UCN2|UII urotensin 2 protein-coding chr7-9354 chr7 129539541 129539751 + 4.95 0.000 Intergenic MER74B|LTR|ERVL 37115 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr4-4647 chr4 81926495 81926705 + 4.95 0.000 Intergenic L2c|LINE|L2 447391 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr5-3269 chr5 109124947 109125157 + 4.95 0.000 intron (NR_146155, intron 17 of 19) AluY|SINE|Alu 200446 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding chr9-7667 chr9 69273258 69273468 + 4.95 0.000 Intergenic Intergenic 33693 NR_047671 100885775 Hs.49768 NR_047671 ENSG00000278910 BANCR LINC00586 BRAF-activated non-protein coding RNA ncRNA chr11-9251 chr11 42738620 42738830 + 4.95 0.000 Intergenic L2a|LINE|L2 -485035 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr10-4180 chr10 97533014 97533224 + 4.95 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) 34195 NM_024954 80019 Hs.500724 NM_024954 ENSG00000165886 UBTD1 - ubiquitin domain containing 1 protein-coding chr2-13428 chr2 142545101 142545311 + 4.95 0.000 Intergenic Intergenic -332458 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr2-11621 chr2 4138032 4138242 + 4.95 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 163976 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr17-7440 chr17 12260743 12260953 + 4.95 0.000 Intergenic Intergenic 178949 NR_030613 100126313 NR_030613 ENSG00000266297 MIR744 MIRN744|hsa-mir-744|mir-744 microRNA 744 ncRNA chr2-7597 chr2 25915468 25915678 + 4.95 0.000 Intergenic LTR12C|LTR|ERV1 -37086 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr22-4266 chr22 48645681 48645891 + 4.95 0.000 intron (NM_015381, intron 1 of 3) intron (NM_015381, intron 1 of 3) 69446 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr3-10469 chr3 133970720 133970930 + 4.95 0.000 intron (NM_005630, intron 3 of 13) intron (NM_005630, intron 3 of 13) -41013 NR_161373 80111 Hs.287691 NM_025041 ENSG00000174640 C3orf36 - chromosome 3 open reading frame 36 ncRNA chr5-7268 chr5 13217396 13217606 + 4.95 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -184615 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr3-10567 chr3 141405560 141405770 + 4.95 0.000 intron (NM_001080412, intron 7 of 7) intron (NM_001080412, intron 7 of 7) 3316 NM_001350100 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr12-5587 chr12 30244332 30244542 + 4.95 0.000 Intergenic Intergenic 432807 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr14-2095 chr14 72863462 72863672 + 4.95 0.000 intron (NM_001280542, intron 1 of 10) (A)n|Simple_repeat|Simple_repeat 29082 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr4-3734 chr4 77538621 77538831 + 4.95 0.000 intron (NM_006419, intron 1 of 4) intron (NM_006419, intron 1 of 4) 26973 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr3-10477 chr3 134571025 134571235 + 4.95 0.000 intron (NM_001353123, intron 11 of 11) intron (NM_001353123, intron 11 of 11) 79888 NM_001366276 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr17-8020 chr17 50035687 50035897 + 4.95 0.000 Intergenic Intergenic 19947 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 PICART1 - p53 inducible cancer associated RNA transcript 1 ncRNA chr11-8892 chr11 15397899 15398109 + 4.95 0.000 Intergenic AluY|SINE|Alu -245881 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chrX-3674 chrX 104237972 104238182 + 4.95 0.000 Intergenic AluSz|SINE|Alu 16856 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr1-12142 chr1 174469683 174469893 + 4.95 0.000 intron (NM_001366446, intron 13 of 25) UCON37|Unknown|Unknown 21824 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding chr10-8845 chr10 110738775 110738985 + 4.95 0.000 intron (NM_001134363, intron 1 of 13) intron (NM_001134363, intron 1 of 13) 94544 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr3-6482 chr3 110318089 110318299 + 4.95 0.000 Intergenic Intergenic 715366 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr1-9254 chr1 24284324 24284534 + 4.95 0.000 Intergenic L2c|LINE|L2 -34928 NM_198174 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chrX-3328 chrX 128547583 128547793 + 4.95 0.000 Intergenic L1M1|LINE|L1 -495285 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr15-4788 chr15 71471299 71471509 + 4.95 0.000 intron (NM_024817, intron 6 of 16) intron (NM_024817, intron 6 of 16) -75832 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr2-8444 chr2 120881729 120881939 + 4.95 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 89553 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2-10905 chr2 71149728 71149938 + 4.95 0.000 intron (NM_005791, intron 10 of 10) intron (NM_005791, intron 10 of 10) 19199 NM_005791 10199 Hs.656208 NM_005791 ENSG00000124383 MPHOSPH10 CT90|MPP10|MPP10P|PPP1R106 M-phase phosphoprotein 10 protein-coding chr6-5863 chr6 36853485 36853695 + 4.95 0.000 Intergenic Intergenic -14146 NM_020939 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr1-11434 chr1 66996151 66996361 + 4.95 0.000 Intergenic Intergenic 57892 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr22-3253 chr22 44344098 44344308 + 4.95 0.000 Intergenic L2b|LINE|L2 -31252 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr14-4716 chr14 59536094 59536304 + 4.95 0.000 intron (NM_001164399, intron 13 of 19) L2a|LINE|L2 40613 NM_001164399 729665 NM_001164399 ENSG00000151838 CCDC175 C14orf38|c14_5395 coiled-coil domain containing 175 protein-coding chr18-3295 chr18 53936564 53936774 + 4.95 0.000 Intergenic L2|LINE|L2 285743 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr2-14617 chr2 234244473 234244683 + 4.95 0.000 Intergenic L1MEd|LINE|L1 193876 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr2-13012 chr2 107694964 107695174 + 4.95 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -59043 NR_126370 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA chr1-16288 chr1 214496330 214496540 + 4.95 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 55167 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr2-14434 chr2 222476508 222476718 + 4.95 0.000 intron (NM_152386, intron 2 of 4) intron (NM_152386, intron 2 of 4) 52070 NM_152386 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr20-3994 chr20 35718191 35718401 + 4.95 0.000 intron (NR_040722, intron 10 of 17) intron (NR_040722, intron 10 of 17) 18891 NM_080748 140823 Hs.472564 NM_080748 ENSG00000125995 ROMO1 C20orf52|MTGM|MTGMP|bA353C18.2 reactive oxygen species modulator 1 protein-coding chr6-7640 chr6 80779842 80780052 + 4.95 0.000 Intergenic L1PA4|LINE|L1 673276 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr12-8070 chr12 116694721 116694931 + 4.95 0.000 Intergenic Intergenic 43243 NM_001353625 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr1-14715 chr1 64699371 64699581 + 4.95 0.000 Intergenic Intergenic -45497 NM_001366165 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr2-11851 chr2 20922879 20923089 + 4.95 0.000 Intergenic Intergenic -99854 NM_001282719 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr2-7846 chr2 47888693 47888903 + 4.95 0.000 promoter-TSS (NM_025133) promoter-TSS (NM_025133) -79 NM_025133 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr12-7539 chr12 70369413 70369623 + 4.95 0.000 intron (NM_014505, intron 1 of 2) intron (NM_014505, intron 1 of 2) 3228 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 - potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding chr5-3963 chr5 8571370 8571580 + 4.95 0.000 Intergenic Intergenic 110550 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr6-8433 chr6 152316175 152316385 + 4.95 0.000 intron (NM_182961, intron 87 of 145) intron (NM_182961, intron 87 of 145) -64250 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr14-5006 chr14 77203848 77204058 + 4.95 0.000 intron (NM_020431, intron 1 of 23) (CTC)n|Simple_repeat|Simple_repeat 22155 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding chr20-3823 chr20 24018582 24018792 + 4.95 0.000 Intergenic Intergenic -29908 NM_178311 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr9-3346 chr9 107600147 107600357 + 4.95 0.000 Intergenic Intergenic -110483 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr14-5025 chr14 79091880 79092090 + 4.95 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -107997 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr8-7353 chr8 135708387 135708597 + 4.95 0.000 Intergenic Intergenic 251036 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr9-6395 chr9 34405148 34405358 + 4.95 0.000 intron (NM_001184943, intron 2 of 5) intron (NM_001184943, intron 2 of 5) -7443 NM_032596 84688 Hs.50334 NM_032596 ENSG00000164972 C9orf24 CBE1|NYD-SP22|SMRP1|bA573M23.4 chromosome 9 open reading frame 24 protein-coding chr3-9245 chr3 38730037 38730247 + 4.95 0.000 intron (NM_006514, intron 14 of 26) intron (NM_006514, intron 14 of 26) 63868 NM_001293307 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr1-10579 chr1 175243268 175243478 + 4.95 0.000 Intergenic HERVL-int|LTR|ERVL -50386 NM_001162893 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr8-5085 chr8 46046989 46047199 + 4.95 0.000 Intergenic ALR/Alpha|Satellite|centr 570549 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr12-6412 chr12 77775285 77775495 + 4.95 0.000 Intergenic AluSp|SINE|Alu -55504 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr2-13827 chr2 175913783 175913993 + 4.95 0.000 Intergenic L1P3|LINE|L1 88379 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr9-5353 chr9 89976044 89976254 + 4.95 0.000 intron (NR_109791, intron 1 of 2) LTR80A|LTR|ERVL 6733 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr5-6570 chr5 18169923 18170133 + 4.95 0.000 Intergenic L1PA16|LINE|L1 362754 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr3-10806 chr3 160703948 160704158 + 4.95 0.000 Intergenic ERVL-E-int|LTR|ERVL 26893 NM_025047 80117 Hs.287702 NM_025047 ENSG00000179674 ARL14 ARF7 ADP ribosylation factor like GTPase 14 protein-coding chr19-6969 chr19 48128396 48128606 + 4.95 0.000 intron (NR_135500, intron 19 of 27) L2b|LINE|L2 -17649 NM_001159322 8605 Hs.631562 NM_003706 ENSG00000105499 PLA2G4C CPLA2-gamma phospholipase A2 group IVC protein-coding chr2-13892 chr2 180791038 180791248 + 4.95 0.000 intron (NR_104324, intron 3 of 4) MLT1L|LTR|ERVL-MaLR 99039 NR_104319 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA KZ208917.1-1 KZ208917.1 32520 32730 + 4.95 0.000 NA NA NA NA chr4-7881 chr4 104772126 104772336 + 4.95 0.000 Intergenic Intergenic -277337 NM_025212 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr9-7038 chr9 122609596 122609806 + 4.95 0.000 Intergenic Intergenic -5037 NM_012364 158131 Hs.684864 NM_012364 ENSG00000165202 OR1Q1 HSTPCR106|OR1Q2|OR1Q3|OR9-25|OR9-A|OST226|OST226OR9-A|TPCR106 olfactory receptor family 1 subfamily Q member 1 protein-coding chr1-12807 chr1 85049553 85049763 + 4.95 0.000 Intergenic Intergenic -1118 NM_001253693 55283 Hs.535239 NM_018298 ENSG00000055732 MCOLN3 TRP-ML3|TRPML3 mucolipin 3 protein-coding chr21-1866 chr21 42413055 42413265 + 4.95 0.000 exon (NM_001001895, exon 4 of 14) exon (NM_001001895, exon 4 of 14) 9258 NM_001001895 53347 Hs.473912 NM_018961 ENSG00000160185 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding chr1-6600 chr1 38371553 38371763 + 4.95 0.000 Intergenic Intergenic -103538 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr19-6017 chr19 1691206 1691416 + 4.95 0.000 Intergenic Intergenic -38696 NM_001136139 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr13-4002 chr13 69849194 69849404 + 4.95 0.000 intron (NM_001286725, intron 4 of 9) intron (NM_001286725, intron 4 of 9) -257914 NR_002717 6315 Hs.676453 NR_002717 ATXN8OS KLHL1AS|NCRNA00003|SCA8 ATXN8 opposite strand lncRNA ncRNA chr10-4176 chr10 96636803 96637013 + 4.95 0.000 intron (NM_152309, intron 8 of 16) intron (NM_152309, intron 8 of 16) -49896 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr1-9425 chr1 33122143 33122353 + 4.95 0.000 non-coding (NR_146648, exon 12 of 12) non-coding (NR_146648, exon 12 of 12) 40070 NM_001301826 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr17-7938 chr17 44980659 44980869 + 4.95 0.000 Intergenic Intergenic -12461 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr4-5477 chr4 68166804 68167014 + 4.95 0.000 Intergenic Intergenic -15383 NR_015446 100130017 Hs.582037 NR_015446 ENSG00000250426 FTLP10 - ferritin light chain pseudogene 10 pseudo chrX-4112 chrX 24986847 24987057 + 4.95 0.000 intron (NM_016937, intron 36 of 36) MLT1F2|LTR|ERVL-MaLR 29013 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr8-7057 chr8 115130822 115131032 + 4.95 0.000 Intergenic Intergenic 537086 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr12-5592 chr12 41147312 41147522 + 4.95 0.000 Intergenic THE1D|LTR|ERVL-MaLR -40903 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr10-6405 chr10 7724492 7724702 + 4.95 0.000 intron (NM_002216, intron 9 of 20) AluSp|SINE|Alu 21281 NM_002216 3698 Hs.75285 NM_002216 ENSG00000151655 ITIH2 H2P|SHAP inter-alpha-trypsin inhibitor heavy chain 2 protein-coding chr16-3359 chr16 48420803 48421013 + 4.95 0.000 Intergenic AluJo|SINE|Alu -35495 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr20-4327 chr20 53128043 53128253 + 4.95 0.000 intron (NM_173485, intron 1 of 2) intron (NM_173485, intron 1 of 2) -57135 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr3-9998 chr3 99886129 99886339 + 4.95 0.000 intron (NM_001042459, intron 4 of 4) L2a|LINE|L2 -10031 NM_001282794 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr13-4421 chr13 110533618 110533828 + 4.95 0.000 intron (NM_017817, intron 1 of 1) intron (NM_017817, intron 1 of 1) -25544 NR_046583 100874203 Hs.508716 NR_046583 ENSG00000232814 COL4A2-AS1 - COL4A2 antisense RNA 1 ncRNA chr13-2650 chr13 80199107 80199317 + 4.95 0.000 Intergenic MIRb|SINE|MIR 140447 NM_001318538 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr4-7728 chr4 90137402 90137612 + 4.95 0.000 intron (NM_001145065, intron 1 of 10) intron (NM_001145065, intron 1 of 10) 9974 NM_001145065 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr9-7856 chr9 85114218 85114428 + 4.95 0.000 Intergenic MER54A|LTR|ERVL 408422 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr6-7340 chr6 46205617 46205827 + 4.95 0.000 Intergenic Intergenic -34712 NM_001290073 59084 Hs.35198 NM_021572 ENSG00000112796 ENPP5 NPP-5|NPP5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 protein-coding chr4-6481 chr4 151078424 151078634 + 4.95 0.000 Intergenic AluSz|SINE|Alu -21044 NM_001267699 6189 Hs.356572 NM_001006 ENSG00000145425 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding chr1-14245 chr1 36595350 36595560 + 4.95 0.000 Intergenic Intergenic -112141 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr1-16547 chr1 233554206 233554416 + 4.95 0.000 Intergenic Intergenic -59795 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr3-6873 chr3 152292014 152292224 + 4.95 0.000 intron (NM_001314057, intron 1 of 11) intron (NM_001314057, intron 1 of 11) -6895 NM_001363870 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding chr4-6655 chr4 2188046 2188256 + 4.95 0.000 intron (NM_181808, intron 7 of 25) L1MA4|LINE|L1 53970 NM_181808 353497 Hs.368454 NM_181808 ENSG00000130997 POLN POL4P DNA polymerase nu protein-coding chr8-4661 chr8 136225732 136225942 + 4.95 0.000 Intergenic Intergenic -304961 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr7-8342 chr7 43067751 43067961 + 4.95 0.000 Intergenic LTR50|LTR|ERVL -44791 NM_015052 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr5-3369 chr5 138566076 138566286 + 4.95 0.000 intron (NM_004134, intron 9 of 16) AluSp|SINE|Alu -5071 NR_002913 26785 NR_002913 ENSG00000206989 SNORD63 RNU63|SNORD63A|U63 small nucleolar RNA, C/D box 63 snoRNA chr9-6325 chr9 1974687 1974897 + 4.95 0.000 Intergenic Intergenic -40555 NM_001289397 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr1-15442 chr1 153692651 153692861 + 4.95 0.000 intron (NM_000906, intron 20 of 21) AluSz6|SINE|Alu -2963 NR_107050 102466879 NR_107050 ENSG00000274940 MIR8083 hsa-mir-8083 microRNA 8083 ncRNA chrX-4499 chrX 65260120 65260330 + 4.95 0.000 Intergenic L1PB1|LINE|L1 -225484 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr6-6656 chr6 159080781 159080991 + 4.95 0.000 Intergenic Intergenic -35734 NM_152133 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chr20-4285 chr20 50186271 50186481 + 4.95 0.000 non-coding (NR_125739, exon 7 of 7) non-coding (NR_125739, exon 7 of 7) -4207 NM_001285879 1051 Hs.517106 NM_005194 ENSG00000172216 CEBPB C/EBP-beta|IL6DBP|NF-IL6|TCF5 CCAAT enhancer binding protein beta protein-coding chr16-6667 chr16 69658369 69658579 + 4.95 0.000 intron (NM_173215, intron 6 of 13) AluSq2|SINE|Alu 50201 NR_145753 109617018 NR_145753 SNORD13H - small nucleolar RNA, C/D box 13H snoRNA chr3-8555 chr3 149906642 149906852 + 4.95 0.000 intron (NM_183383, intron 5 of 8) AluJb|SINE|Alu 64148 NM_053024 5217 Hs.91747 NM_002628 ENSG00000070087 PFN2 D3S1319E|PFL profilin 2 protein-coding chr6-5936 chr6 71510163 71510373 + 4.95 0.000 Intergenic Intergenic 89241 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr4-7849 chr4 102380472 102380682 + 4.95 0.000 Intergenic L1PA4|LINE|L1 -35095 NM_001135146 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chr2-13937 chr2 184577774 184577984 + 4.95 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -20650 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr12-3442 chr12 111913559 111913769 + 4.95 0.000 Intergenic Intergenic 14601 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo chr6-8459 chr6 154457922 154458132 + 4.95 0.000 intron (NM_001368117, intron 1 of 12) MER58A|DNA|hAT-Charlie 20464 NM_001368118 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr19-4051 chr19 6730812 6731022 + 4.95 0.000 intron (NM_020171, intron 17 of 17) intron (NM_020171, intron 17 of 17) 5861 NR_106849 102465474 NR_106849 ENSG00000283950 MIR6791 hsa-mir-6791 microRNA 6791 ncRNA chr1-11449 chr1 80258809 80259019 + 4.95 0.000 Intergenic L1MCc|LINE|L1 -276841 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr4-7062 chr4 30339598 30339808 + 4.95 0.000 Intergenic AluSx1|SINE|Alu -380666 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr5-5346 chr5 131300708 131300918 + 4.95 0.000 intron (NM_001038702, intron 1 of 4) MER94|DNA|hAT-Blackjack 36804 NM_020240 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding chr3-2084 chr3 9837093 9837303 + 4.95 0.000 TTS (NR_037162) TTS (NR_037162) 6810 NM_001351736 285367 Hs.33719 NM_173659 ENSG00000156990 RPUSD3 - RNA pseudouridine synthase D3 protein-coding chrX-4371 chrX 50138513 50138723 + 4.95 0.000 Intergenic Intergenic 61754 NM_139289 8852 Hs.97633 NM_003886 ENSG00000147081 AKAP4 AKAP 82|AKAP-4|AKAP82|CT99|FSC1|HI|PRKA4|hAKAP82|p82 A-kinase anchoring protein 4 protein-coding chr12-7374 chr12 56811665 56811875 + 4.95 0.000 Intergenic LTR1A2|LTR|ERV1 48446 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chrX-4333 chrX 46142040 46142250 + 4.95 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 185529 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr1-15263 chr1 114102920 114103130 + 4.95 0.000 intron (NM_001366223, intron 4 of 7) intron (NM_001366223, intron 4 of 7) 49415 NM_205848 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr3-9163 chr3 33608240 33608450 + 4.95 0.000 intron (NM_001365634, intron 14 of 35) intron (NM_001365634, intron 14 of 35) 51334 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr3-7807 chr3 96946074 96946284 + 4.95 0.000 intron (NM_001080448, intron 2 of 17) L1MC1|LINE|L1 131585 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr1-14450 chr1 46454485 46454695 + 4.95 0.000 Intergenic L2c|LINE|L2 -4886 NR_121680 101929651 Hs.638707 NR_121680 ENSG00000224863 LINC01398 - long intergenic non-protein coding RNA 1398 ncRNA chr3-10799 chr3 160138049 160138259 + 4.95 0.000 intron (NR_108088, intron 3 of 9) intron (NR_108088, intron 3 of 9) 68938 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chr15-4471 chr15 49187277 49187487 + 4.95 0.000 intron (NM_002044, intron 1 of 9) L1MA3|LINE|L1 17135 NM_002044 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr1-15759 chr1 173267844 173268054 + 4.95 0.000 intron (NR_037845, intron 2 of 2) L1MDa|LINE|L1 -60618 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr16-5595 chr16 52759794 52760004 + 4.95 0.000 Intergenic L2a|LINE|L2 -152924 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr18-3419 chr18 63347048 63347258 + 4.95 0.000 intron (NM_002035, intron 6 of 9) intron (NM_002035, intron 6 of 9) 20053 NM_002035 2531 Hs.74050 NM_002035 ENSG00000119537 KDSR DHSR|EKVP4|FVT1|SDR35C1 3-ketodihydrosphingosine reductase protein-coding chr9-3115 chr9 76744358 76744568 + 4.95 0.000 intron (NM_001308048, intron 6 of 17) intron (NM_001308048, intron 6 of 17) -19973 NR_132312 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3|PRUNE2-AS1 prostate cancer associated 3 ncRNA chr2-8931 chr2 185454189 185454399 + 4.95 0.000 Intergenic L1M2|LINE|L1 284425 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr21-1343 chr21 32352919 32353129 + 4.95 0.000 intron (NM_014825, intron 18 of 38) intron (NM_014825, intron 18 of 38) 24298 NR_002996 677846 Hs.712293 NR_002996 ENSG00000200792 SNORA80A ACA67|SNORA80 small nucleolar RNA, H/ACA box 80A snoRNA chr20-4248 chr20 48725741 48725951 + 4.95 0.000 intron (NM_020820, intron 5 of 39) intron (NM_020820, intron 5 of 39) 102153 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr3-7580 chr3 7474304 7474514 + 4.95 0.000 intron (NM_000844, intron 7 of 9) intron (NM_000844, intron 7 of 9) 60875 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr15-1832 chr15 42601476 42601686 + 4.95 0.000 intron (NM_020759, intron 3 of 32) SVA_B|Retroposon|SVA 25975 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr15-3895 chr15 99960858 99961068 + 4.95 0.000 Intergenic AluJr|SINE|Alu 153940 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chrX-4085 chrX 22984143 22984353 + 4.95 0.000 intron (NR_073010, intron 3 of 11) L1MB1|LINE|L1 -15712 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr19-6710 chr19 36232038 36232248 + 4.95 0.000 intron (NM_001099639, intron 2 of 2) AluSx|SINE|Alu 13785 NM_001366188 147929 Hs.596338 NM_152477 ENSG00000196357 ZNF565 - zinc finger protein 565 protein-coding chr6-7917 chr6 109414984 109415194 + 4.95 0.000 intron (NR_104429, intron 6 of 8) Tigger2|DNA|TcMar-Tigger -25635 NM_003080 6610 Hs.55235 NM_003080 ENSG00000135587 SMPD2 ISC1|NSMASE|NSMASE1 sphingomyelin phosphodiesterase 2 protein-coding chr1-15243 chr1 112246012 112246222 + 4.95 0.000 Intergenic Intergenic -150097 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr9-8185 chr9 107127456 107127666 + 4.95 0.000 Intergenic Intergenic -24573 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr11-8749 chr11 8619528 8619738 + 4.95 0.000 intron (NM_014818, intron 17 of 19) intron (NM_014818, intron 17 of 19) -25405 NM_001352392 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr7-3423 chr7 148983280 148983490 + 4.95 0.000 promoter-TSS (NR_004392) promoter-TSS (NR_004392) -370 NR_004392 6085 NR_004392 ENSG00000202354 RNY3 HY3|Y3 RNA, Ro60-associated Y3 ncRNA chr13-4381 chr13 108848284 108848494 + 4.95 0.000 intron (NM_015011, intron 10 of 34) MIRc|SINE|MIR 218778 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr7-7360 chr7 56020119 56020329 + 4.95 0.000 intron (NM_001370522, intron 5 of 8) AluSx|SINE|Alu 31220 NM_001370511 5723 Hs.512656 NM_004577 ENSG00000146733 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding chr10-9176 chr10 130484336 130484546 + 4.95 0.000 Intergenic Intergenic 348032 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr6-6650 chr6 158354835 158355045 + 4.95 0.000 intron (NM_020245, intron 1 of 13) intron (NM_020245, intron 1 of 13) 31958 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr2-13931 chr2 183726332 183726542 + 4.95 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 601994 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr16-3150 chr16 75210396 75210606 + 4.95 0.000 Intergenic AluJb|SINE|Alu -3340 NM_001025200 440387 Hs.610926 NM_001025200 ENSG00000168928 CTRB2 - chymotrypsinogen B2 protein-coding chr5-3869 chr5 138274486 138274696 + 4.95 0.000 promoter-TSS (NM_001496) promoter-TSS (NM_001496) 30 NM_001496 2676 Hs.58042 NM_001496 ENSG00000146013 GFRA3 GDNFR3 GDNF family receptor alpha 3 protein-coding chr9-3490 chr9 15379007 15379217 + 4.95 0.000 Intergenic AluY|SINE|Alu -43672 NM_001039697 6619 Hs.546299 NM_003084 ENSG00000164975 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex polypeptide 3 protein-coding chr1-9879 chr1 67163473 67163683 + 4.95 0.000 Intergenic MSTB|LTR|ERVL-MaLR -2876 NM_144701 149233 Hs.677426 NM_144701 ENSG00000162594 IL23R - interleukin 23 receptor protein-coding chr3-8923 chr3 13241204 13241414 + 4.95 0.000 Intergenic Intergenic -167880 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr20-3529 chr20 708386 708596 + 4.95 0.000 Intergenic AluJo|SINE|Alu -32689 NM_033129 85508 Hs.355284 NM_033129 ENSG00000215397 SCRT2 ZNF898B scratch family transcriptional repressor 2 protein-coding chr14-4147 chr14 74668143 74668353 + 4.95 0.000 intron (NM_001039479, intron 15 of 19) intron (NM_001039479, intron 15 of 19) 44832 NM_001039479 9870 Hs.497417 NM_014821 ENSG00000119682 AREL1 FIEL1|KIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding chr7-6637 chr7 127809422 127809632 + 4.95 0.000 intron (NM_014390, intron 11 of 23) intron (NM_014390, intron 11 of 23) 157333 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr15-2346 chr15 34795477 34795687 + 4.95 0.000 promoter-TSS (NM_005159) promoter-TSS (NM_005159) -33 NM_005159 70 Hs.118127 NM_005159 ENSG00000159251 ACTC1 ACTC|ASD5|CMD1R|CMH11|LVNC4 actin alpha cardiac muscle 1 protein-coding chr3-2758 chr3 142410401 142410611 + 4.95 0.000 intron (NM_019001, intron 15 of 41) AluSc|SINE|Alu 37531 NM_019001 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr3-8623 chr3 169856831 169857041 + 4.95 0.000 intron (NM_001277128, intron 2 of 7) intron (NM_001277128, intron 2 of 7) 12999 NM_001277127 79782 Hs.411295 NM_024727 ENSG00000114248 LRRC31 HEL-S-293 leucine rich repeat containing 31 protein-coding chr2-8066 chr2 73259428 73259638 + 4.95 0.000 intron (NM_001371389, intron 11 of 12) intron (NM_001371389, intron 11 of 12) 24945 NM_001371389 chr1-16281 chr1 213575306 213575516 + 4.83 0.000 Intergenic THE1C|LTR|ERVL-MaLR -349338 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr3-8351 chr3 76965424 76965634 + 4.83 0.000 Intergenic Intergenic -74570 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr10-7790 chr10 36267104 36267314 + 4.83 0.000 Intergenic Intergenic 488907 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr4-6794 chr4 7470307 7470517 + 4.83 0.000 intron (NM_020777, intron 2 of 26) (ATCC)n|Simple_repeat|Simple_repeat 10384 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr6-4188 chr6 2726324 2726534 + 4.83 0.000 intron (NM_001012418, intron 2 of 12) intron (NM_001012418, intron 2 of 12) 24493 NM_001012418 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr10-8640 chr10 99279880 99280090 + 4.83 0.000 Intergenic Intergenic -44110 NM_021828 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding chrX-3526 chrX 50658565 50658775 + 4.83 0.000 intron (NR_027121, intron 2 of 9) intron (NR_027121, intron 2 of 9) 155374 NM_020717 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding KI270507.1-1 KI270507.1 1717 1927 + 4.83 0.000 NA NA NA NA chr12-4661 chr12 46453051 46453261 + 4.83 0.000 intron (NR_125381, intron 2 of 2) intron (NR_125381, intron 2 of 2) 69049 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr16-6984 chr16 87187818 87188028 + 4.83 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -24192 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr2-9661 chr2 27096340 27096550 + 4.83 0.000 intron (NM_006488, intron 3 of 7) intron (NM_006488, intron 3 of 7) 9673 NM_000221 3795 Hs.567297 NM_000221 ENSG00000138030 KHK - ketohexokinase protein-coding chrX-3184 chrX 40385267 40385477 + 4.83 0.000 Intergenic MIRb|SINE|MIR 122455 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr6-6321 chr6 46530600 46530810 + 4.83 0.000 intron (NR_125837, intron 2 of 2) MIRc|SINE|MIR -38638 NM_001251973 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr6-4018 chr6 123388467 123388677 + 4.83 0.000 intron (NM_001251987, intron 13 of 20) intron (NM_001251987, intron 13 of 20) -51032 NR_110844 101927990 Hs.660877 NR_110844 TRDN-AS1 HRAT13 TRDN antisense RNA 1 ncRNA chr8-2646 chr8 69901550 69901760 + 4.83 0.000 Intergenic AluSq2|SINE|Alu -66677 NM_030958 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr11-6990 chr11 116731281 116731491 + 4.83 0.000 Intergenic Intergenic 41601 NM_032725 84811 Hs.437341 NM_032725 ENSG00000137656 BUD13 Cwc26|fSAP71 BUD13 homolog protein-coding chr22-1757 chr22 25246803 25247013 + 4.83 0.000 Intergenic Intergenic 27269 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding chr3-7411 chr3 106927427 106927637 + 4.83 0.000 Intergenic HERVH-int|LTR|ERV1 313106 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr1-16490 chr1 229358966 229359176 + 4.83 0.000 Intergenic L1PBa|LINE|L1 -16024 NM_145257 126731 Hs.585011 NM_145257 ENSG00000154429 CCSAP C1orf96|CSAP centriole, cilia and spindle associated protein protein-coding chr9-5388 chr9 92831318 92831528 + 4.83 0.000 intron (NR_026868, intron 8 of 9) SVA_D|Retroposon|SVA 21812 NR_026868 138649 Hs.643597 NM_001010925 ENSG00000187984 ANKRD19P ANKRD19|bA526D8.2 ankyrin repeat domain 19, pseudogene pseudo chr17-6063 chr17 79621560 79621770 + 4.83 0.000 Intergenic Intergenic -10614 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chrX-2336 chrX 57587344 57587554 + 4.83 0.000 Intergenic L1PB4|LINE|L1 -4387 NM_007157 158586 Hs.156257 NM_007157 ENSG00000198455 ZXDB ZNF905|dJ83L6.1 zinc finger X-linked duplicated B protein-coding chr2-9599 chr2 241451625 241451835 + 4.83 0.000 intron (NM_014808, intron 13 of 26) intron (NM_014808, intron 13 of 26) -26175 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr2-10019 chr2 26151529 26151739 + 4.83 0.000 Intergenic AluJb|SINE|Alu -21454 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr2-14017 chr2 191428117 191428327 + 4.83 0.000 Intergenic Intergenic 182818 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr19-5212 chr19 30554134 30554344 + 4.83 0.000 intron (NM_001352260, intron 4 of 5) intron (NM_001352260, intron 4 of 5) 181855 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr1-14296 chr1 38577870 38578080 + 4.83 0.000 Intergenic Intergenic 102779 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr2-14030 chr2 192829013 192829223 + 4.83 0.000 Intergenic MER52A|LTR|ERV1 79273 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chr2-13932 chr2 183840074 183840284 + 4.83 0.000 Intergenic L1PBa1|LINE|L1 -538796 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chrX-912 chrX 154444125 154444335 + 4.83 0.000 promoter-TSS (NM_004699) promoter-TSS (NM_004699) 89 NM_004699 9130 Hs.54277 NM_004699 ENSG00000071859 FAM50A 9F|DXS9928E|HXC-26|HXC26|XAP5 family with sequence similarity 50 member A protein-coding chr12-8317 chr12 129497865 129498075 + 4.83 0.000 intron (NM_133448, intron 3 of 8) intron (NM_133448, intron 3 of 8) 289369 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chr19-6937 chr19 46738947 46739157 + 4.83 0.000 intron (NM_001039877, intron 1 of 17) intron (NM_001039877, intron 1 of 17) -7005 NM_001039885 79147 Hs.515493 NM_024301 ENSG00000181027 FKRP LGMD2I|LGMDR9|MDC1C|MDDGA5|MDDGB5|MDDGC5 fukutin related protein protein-coding chr2-13423 chr2 142200013 142200223 + 4.83 0.000 Intergenic Intergenic -68417 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr3-7823 chr3 103249478 103249688 + 4.83 0.000 Intergenic MLT1J1-int|LTR|ERVL-MaLR 274533 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr3-7326 chr3 40590330 40590540 + 4.83 0.000 Intergenic LTR16C|LTR|ERVL 65475 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr9-6818 chr9 36116063 36116273 + 4.83 0.000 intron (NM_021111, intron 16 of 20) AluSp|SINE|Alu -20368 NR_104641 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr12-7326 chr12 54996313 54996523 + 4.83 0.000 Intergenic Intergenic -11656 NM_001351149 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|ITPRID3|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr6-7980 chr6 114277269 114277479 + 4.83 0.000 intron (NR_125845, intron 9 of 9) intron (NR_125845, intron 9 of 9) -214497 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr6-7401 chr6 51541912 51542122 + 4.83 0.000 Intergenic Intergenic -79853 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chrX-5155 chrX 131479570 131479780 + 4.83 0.000 Intergenic L1PB1|LINE|L1 -64399 NM_001004486 347468 Hs.553711 NM_001004486 ENSG00000171054 OR13H1 ORX1 olfactory receptor family 13 subfamily H member 1 protein-coding chr17-2825 chr17 16666971 16667181 + 4.83 0.000 Intergenic CpG -13226 NM_020787 57547 Hs.128078 NM_020787 ENSG00000197566 ZNF624 - zinc finger protein 624 protein-coding chr20-3615 chr20 6162431 6162641 + 4.83 0.000 Intergenic Intergenic -38992 NM_017671 55612 Hs.472054 NM_017671 ENSG00000101311 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding chr12-8324 chr12 129786085 129786295 + 4.83 0.000 intron (NM_133448, intron 1 of 8) intron (NM_133448, intron 1 of 8) 117835 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr15-3876 chr15 92992801 92993011 + 4.83 0.000 exon (NM_001271, exon 28 of 39) exon (NM_001271, exon 28 of 39) 80250 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr8-7070 chr8 116802624 116802834 + 4.83 0.000 Intergenic Intergenic 36205 NM_032334 84294 Hs.86970 NM_032334 ENSG00000147679 UTP23 C8orf53 UTP23 small subunit processome component protein-coding chr6-4573 chr6 43129831 43130041 + 4.83 0.000 intron (NR_072997, intron 3 of 18) intron (NR_072997, intron 3 of 18) -41333 NM_003131 6722 Hs.520140 NM_003131 ENSG00000112658 SRF MCM1 serum response factor protein-coding chr3-9981 chr3 98312122 98312332 + 4.83 0.000 Intergenic Intergenic 29339 NM_001005482 79310 Hs.554711 NM_001005482 ENSG00000197938 OR5H2 OR3-10 olfactory receptor family 5 subfamily H member 2 protein-coding chr2-12897 chr2 99058215 99058425 + 4.83 0.000 intron (NR_146001, intron 15 of 18) L1M5|LINE|L1 82860 NR_146001 80705 Hs.120267 NM_025244 ENSG00000135951 TSGA10 CEP4L|CT79|SPGF26 testis specific 10 protein-coding chr7-6262 chr7 135228107 135228317 + 4.83 0.000 Intergenic MLT2C1|LTR|ERVL -3767 NM_182489 346673 Hs.592279 NM_182489 ENSG00000146857 STRA8 - stimulated by retinoic acid 8 protein-coding chr18-2016 chr18 43419111 43419321 + 4.83 0.000 Intergenic Intergenic -141726 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr5-7841 chr5 68821143 68821353 + 4.83 0.000 Intergenic Intergenic 208679 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr6-5920 chr6 55781550 55781760 + 4.83 0.000 intron (NM_001329754, intron 3 of 5) AluSx|SINE|Alu 93935 NM_001329756 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding chr1-8791 chr1 1567824 1568034 + 4.83 0.000 intron (NM_014188, intron 1 of 4) AluSz|SINE|Alu 6934 NM_014188 29101 Hs.30026 NM_014188 ENSG00000160075 SSU72 HSPC182|PNAS-120 SSU72 homolog, RNA polymerase II CTD phosphatase protein-coding chr1-7391 chr1 30615565 30615775 + 4.83 0.000 Intergenic MIR3|SINE|MIR -103102 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr1-16557 chr1 234083400 234083610 + 4.83 0.000 intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -130706 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr12-7485 chr12 66407689 66407899 + 4.83 0.000 intron (NM_001366722, intron 15 of 24) L1MA2|LINE|L1 105249 NR_135080 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr11-9490 chr11 62368413 62368623 + 4.83 0.000 intron (NM_025080, intron 4 of 6) LTR5_Hs|LTR|ERVK 31070 NM_001083926 80150 Hs.535326 NM_025080 ENSG00000162174 ASRGL1 ALP|ALP1|CRASH asparaginase like 1 protein-coding chr8-6745 chr8 89700542 89700752 + 4.83 0.000 Intergenic L1P4e|LINE|L1 57064 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr10-7988 chr10 60295098 60295308 + 4.83 0.000 intron (NM_001204403, intron 2 of 43) MIR|SINE|MIR 94672 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr2-13531 chr2 151726383 151726593 + 4.83 0.000 intron (NM_001271208, intron 5 of 182) intron (NM_001271208, intron 5 of 182) 7988 NM_001271208 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr12-7800 chr12 97995990 97996200 + 4.83 0.000 promoter-TSS (NR_036189) promoter-TSS (NR_036189) -647 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr3-7909 chr3 138153408 138153618 + 4.83 0.000 Intergenic L1MC5a|LINE|L1 -21123 NM_016161 51146 Hs.278960 NM_016161 ENSG00000118017 A4GNT alpha4GnT alpha-1,4-N-acetylglucosaminyltransferase protein-coding chr6-3330 chr6 1652761 1652971 + 4.83 0.000 intron (NM_001253846, intron 9 of 10) intron (NM_001253846, intron 9 of 10) 42951 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr14-3897 chr14 97812685 97812895 + 4.83 0.000 Intergenic Intergenic -49959 NR_146447 100132612 Hs.587781 NR_146447 ENSG00000258869 LINC02312 - long intergenic non-protein coding RNA 2312 ncRNA chr7-7445 chr7 83012570 83012780 + 4.83 0.000 intron (NM_033026, intron 3 of 24) Charlie8|DNA|hAT-Charlie 150209 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr9-2990 chr9 83817633 83817843 + 4.83 0.000 promoter-TSS (NM_001135953) promoter-TSS (NM_001135953) 31 NM_025211 80318 Hs.522255 NM_025211 ENSG00000165113 GKAP1 FKSG21|GKAP42 G kinase anchoring protein 1 protein-coding chr9-8153 chr9 103838608 103838818 + 4.83 0.000 Intergenic AluJr|SINE|Alu -160996 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr1-12935 chr1 147020243 147020453 + 4.83 0.000 intron (NR_024442, intron 5 of 5) intron (NR_024442, intron 5 of 5) 22691 NR_024442 728989 Hs.537068 NR_024442 LOC728989 - phosphodiesterase 4D interacting protein pseudogene pseudo chr7-8454 chr7 48010025 48010235 + 4.83 0.000 intron (NM_001030019, intron 3 of 9) (AC)n|Simple_repeat|Simple_repeat 18977 NM_001030019 256979 Hs.406741 NM_152782 ENSG00000164744 SUN3 SUNC1 Sad1 and UNC84 domain containing 3 protein-coding chr5-7916 chr5 77428614 77428824 + 4.83 0.000 TTS (NM_001349753) TTS (NM_001349753) 63597 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr6-8300 chr6 143815899 143816109 + 4.83 0.000 intron (NM_001100165, intron 11 of 11) intron (NM_001100165, intron 11 of 11) -27269 NM_001329953 84946 Hs.185675 NM_032860 ENSG00000135521 LTV1 C6orf93|dJ468K18.4 LTV1 ribosome biogenesis factor protein-coding chr10-8846 chr10 110785969 110786179 + 4.83 0.000 intron (NM_001134363, intron 5 of 13) intron (NM_001134363, intron 5 of 13) 84830 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr1-12180 chr1 192508640 192508850 + 4.83 0.000 Intergenic Intergenic -67028 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G protein signaling 1 protein-coding chr8-5842 chr8 6302550 6302760 + 4.83 0.000 Intergenic LTR38|LTR|ERV1 103893 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chrX-1655 chrX 143337090 143337300 + 4.83 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR 180280 NM_001009609 139067 Hs.447320 NM_001009609 ENSG00000189252 SPANXN3 CT11.8|SPANX-N3 SPANX family member N3 protein-coding chr2-13557 chr2 154143956 154144166 + 4.83 0.000 intron (NM_052917, intron 4 of 12) intron (NM_052917, intron 4 of 12) 199667 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr17-7108 chr17 73824096 73824306 + 4.83 0.000 intron (NR_027146, intron 1 of 3) intron (NR_027146, intron 1 of 3) 4336 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr2-12030 chr2 29283662 29283872 + 4.83 0.000 intron (NM_004304, intron 9 of 28) intron (NM_004304, intron 9 of 28) -59867 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr4-8732 chr4 184421711 184421921 + 4.83 0.000 intron (NM_002199, intron 2 of 8) intron (NM_002199, intron 2 of 8) -39510 NR_125933 102723766 Hs.432281 NR_125933 ENSG00000249096 LINC02362 - long intergenic non-protein coding RNA 2362 ncRNA chr10-7076 chr10 90000625 90000835 + 4.83 0.000 Intergenic Intergenic -43357 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr10-8291 chr10 77268004 77268214 + 4.83 0.000 intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 82652 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr22-3428 chr22 38881432 38881642 + 4.83 0.000 Intergenic Intergenic -9321 NM_014292 23466 Hs.592201 NM_014292 ENSG00000183741 CBX6 - chromobox 6 protein-coding chr11-5260 chr11 32788348 32788558 + 4.83 0.000 intron (NM_001008391, intron 1 of 17) intron (NM_001008391, intron 1 of 17) 6205 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr7-7313 chr7 44296553 44296763 + 4.83 0.000 intron (NM_172081, intron 1 of 18) L1MB4|LINE|L1 28936 NM_172084 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr11-8819 chr11 11731361 11731571 + 4.83 0.000 Intergenic Intergenic 51756 NR_107037 102465870 NR_107037 ENSG00000278529 MIR8070 hsa-mir-8070 microRNA 8070 ncRNA chr3-6415 chr3 100121947 100122157 + 4.83 0.000 intron (NM_001167924, intron 1 of 9) intron (NM_001167924, intron 1 of 9) 7122 NM_001167924 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr2-11290 chr2 187485601 187485811 + 4.83 0.000 intron (NM_001318941, intron 5 of 7) intron (NM_001318941, intron 5 of 7) -37454 NM_001369434 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr10-7208 chr10 113940202 113940412 + 4.83 0.000 Intergenic Intergenic 85646 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding chr4-7971 chr4 113105215 113105425 + 4.83 0.000 intron (NM_001354232, intron 1 of 46) intron (NM_001354232, intron 1 of 46) -1543 NR_031641 100302188 NR_031641 ENSG00000283193 MIR1243 MIRN1243|hsa-mir-1243 microRNA 1243 ncRNA chr10-8713 chr10 102269010 102269220 + 4.83 0.000 intron (NM_001199378, intron 3 of 39) intron (NM_001199378, intron 3 of 39) 23583 NM_001199379 8729 Hs.290243 NM_004193 ENSG00000107862 GBF1 ARF1GEF golgi brefeldin A resistant guanine nucleotide exchange factor 1 protein-coding chr10-5391 chr10 74721362 74721572 + 4.83 0.000 Intergenic L1MA8|LINE|L1 -103788 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr11-8686 chr11 4503776 4503986 + 4.83 0.000 Intergenic Intergenic 15002 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr3-10724 chr3 154794346 154794556 + 4.83 0.000 Intergenic Intergenic -229673 NM_001354642 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr17-7561 chr17 19579932 19580142 + 4.83 0.000 Intergenic CpG 22477 NR_003022 677882 Hs.658450 NR_003022 ENSG00000266079 SNORA59B ACA59 small nucleolar RNA, H/ACA box 59B snoRNA chr17-7394 chr17 8326567 8326777 + 4.83 0.000 Intergenic Intergenic -13168 NM_001319953 146852 Hs.186045 NM_153007 ENSG00000184650 ODF4 CT134|CT136|OPPO1 outer dense fiber of sperm tails 4 protein-coding chr21-1322 chr21 10706959 10707169 + 4.83 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 185550 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr7-7689 chr7 155745040 155745250 + 4.83 0.000 exon (NM_053043, exon 14 of 18) exon (NM_053043, exon 14 of 18) 63927 NR_132318 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr18-1453 chr18 44681112 44681322 + 4.83 0.000 intron (NM_015559, intron 1 of 5) intron (NM_015559, intron 1 of 5) 329 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr2-12228 chr2 43610791 43611001 + 4.83 0.000 Intergenic AluJb|SINE|Alu -14850 NM_001345925 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding chr17-5732 chr17 58036661 58036871 + 4.83 0.000 Intergenic AluSx|SINE|Alu -29420 NR_034041 6426 Hs.68714 NM_006924 ENSG00000136450 SRSF1 ASF|SF2|SF2p33|SFRS1|SRp30a serine and arginine rich splicing factor 1 protein-coding chr17-2367 chr17 73645119 73645329 + 4.83 0.000 promoter-TSS (NM_001144952) promoter-TSS (NM_001144952) -779 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chr4-7662 chr4 86015473 86015683 + 4.83 0.000 3' UTR (NM_001351624, exon 14 of 14) 3' UTR (NM_001351624, exon 14 of 14) 85562 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr10-7592 chr10 19704374 19704584 + 4.83 0.000 intron (NM_001142308, intron 38 of 39) MLT1A|LTR|ERVL-MaLR 24071 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr7-8705 chr7 74432345 74432555 + 4.83 0.000 Intergenic AluSx|SINE|Alu -21456 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr16-5532 chr16 26038718 26038928 + 4.83 0.000 intron (NM_006040, intron 1 of 1) AluY|SINE|Alu 13586 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr1-9333 chr1 28065350 28065560 + 4.83 0.000 intron (NM_001282562, intron 1 of 16) AluSc|SINE|Alu 23155 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr1-11450 chr1 81125259 81125469 + 4.83 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -180828 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr3-9830 chr3 75985871 75986081 + 4.83 0.000 Intergenic L1MB3|LINE|L1 -200427 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr2-8070 chr2 73815423 73815633 + 4.83 0.000 exon (NM_001080474, exon 3 of 3) exon (NM_001080474, exon 3 of 3) 6789 NM_001353344 388960 Hs.456833 NM_001080474 ENSG00000187833 C2orf78 COG5373|hCG1989538 chromosome 2 open reading frame 78 protein-coding chr11-5089 chr11 117186910 117187120 + 4.83 0.000 intron (NM_001040455, intron 10 of 25) intron (NM_001040455, intron 10 of 25) 8272 NM_001040455 51092 Hs.712144 NM_015996 ENSG00000149577 SIDT2 CGI-40 SID1 transmembrane family member 2 protein-coding chr3-11075 chr3 184740571 184740781 + 4.83 0.000 Intergenic Intergenic 28433 NR_160768 107986163 NR_160768 LOC107986163 - uncharacterized LOC107986163 ncRNA chr4-7733 chr4 91223690 91223900 + 4.83 0.000 intron (NM_001145065, intron 10 of 10) intron (NM_001145065, intron 10 of 10) 988764 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr2-13921 chr2 183071054 183071264 + 4.83 0.000 Intergenic Intergenic -7588 NM_001142314 142679 Hs.132237 NM_080876 ENSG00000162999 DUSP19 DUSP17|LMWDSP3|SKRP1|TS-DSP1 dual specificity phosphatase 19 protein-coding chr5-6680 chr5 61687289 61687499 + 4.83 0.000 intron (NR_161251, intron 3 of 3) intron (NR_161251, intron 3 of 3) 11038 NR_109910 101928651 Hs.662309 NR_109910 ENSG00000248529 LOC101928651 - uncharacterized LOC101928651 ncRNA chr11-5639 chr11 121795445 121795655 + 4.83 0.000 Intergenic Intergenic 304294 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr4-4829 chr4 108762690 108762900 + 4.83 0.000 5' UTR (NM_001331031, exon 1 of 13) 5' UTR (NM_001331031, exon 1 of 13) 258 NM_001146590 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr16-3842 chr16 65749432 65749642 + 4.83 0.000 Intergenic Intergenic -173237 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr4-5899 chr4 134742289 134742499 + 4.83 0.000 Intergenic L1PBa|LINE|L1 318526 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr13-3368 chr13 78861855 78862065 + 4.83 0.000 Intergenic Intergenic -21910 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA chr1-13792 chr1 18396522 18396732 + 4.83 0.000 Intergenic MER68|LTR|ERVL -84303 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr16-3507 chr16 17515839 17516049 + 4.83 0.000 Intergenic Intergenic -44984 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr4-2705 chr4 3268867 3269077 + 4.83 0.000 Intergenic Intergenic 19813 NM_001042690 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr1-11874 chr1 40877855 40878065 + 4.83 0.000 Intergenic Intergenic -15597 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr1-12742 chr1 63267010 63267220 + 4.83 0.000 intron (NR_038252, intron 3 of 11) GA-rich|Low_complexity|Low_complexity 50142 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr18-1574 chr18 34463367 34463577 + 4.83 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -29818 NM_032975 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr16-4430 chr16 52815798 52816008 + 4.83 0.000 Intergenic AluSz|SINE|Alu -208928 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr3-7670 chr3 37931061 37931271 + 4.83 0.000 intron (NM_001008392, intron 1 of 7) AluJr|SINE|Alu -38238 NR_029499 407015 NR_029499 ENSG00000199075 MIR26A1 MIR26A|MIRN26A1|mir-26a-1 microRNA 26a-1 ncRNA chr13-3261 chr13 37280305 37280515 + 4.83 0.000 Intergenic SVA_D|Retroposon|SVA -174746 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr11-4818 chr11 9784414 9784624 + 4.83 0.000 intron (NM_030962, intron 37 of 39) intron (NM_030962, intron 37 of 39) -24986 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chr10-2925 chr10 5381309 5381519 + 4.83 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 16448 NM_053049 114131 Hs.511775 NM_053049 ENSG00000178473 UCN3 SCP|SPC|UCNIII urocortin 3 protein-coding chr6-7929 chr6 110341938 110342148 + 4.83 0.000 intron (NM_001123364, intron 1 of 4) intron (NM_001123364, intron 1 of 4) -11985 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr3-7900 chr3 133894835 133895045 + 4.83 0.000 intron (NM_001363953, intron 1 of 8) CpG 907 NM_001363953 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr14-3657 chr14 83144884 83145094 + 4.83 0.000 Intergenic AluY|SINE|Alu 502357 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr1-14884 chr1 81472265 81472475 + 4.83 0.000 intron (NM_001366008, intron 2 of 26) AluSx|SINE|Alu 85332 NR_125943 101927434 Hs.130394 NR_125943 ENSG00000234953 LOC101927434 - uncharacterized LOC101927434 ncRNA chr10-8820 chr10 109031268 109031478 + 4.83 0.000 Intergenic Intergenic 891873 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr1-7485 chr1 102635837 102636047 + 4.83 0.000 Intergenic Intergenic 472554 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr10-4805 chr10 8331997 8332207 + 4.83 0.000 Intergenic Intergenic -63797 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chr20-3450 chr20 50581259 50581469 + 4.83 0.000 exon (NM_001278618, exon 8 of 9) exon (NM_001278618, exon 8 of 9) -4422 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr16-2707 chr16 85413228 85413438 + 4.83 0.000 Intergenic Intergenic -107008 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr4-5661 chr4 11292454 11292664 + 4.83 0.000 Intergenic Intergenic -76268 NR_030298 693157 NR_030298 ENSG00000207716 MIR572 MIRN572|hsa-mir-572 microRNA 572 ncRNA chr13-2065 chr13 55445249 55445459 + 4.83 0.000 Intergenic AluJo|SINE|Alu 270900 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr2-12736 chr2 83411920 83412130 + 4.83 0.000 Intergenic Intergenic -110789 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr1-15852 chr1 181371366 181371576 + 4.83 0.000 Intergenic AluJo|SINE|Alu -112046 NM_000721 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr4-8741 chr4 185713629 185713839 + 4.83 0.000 intron (NM_001145672, intron 1 of 20) intron (NM_001145672, intron 1 of 20) -56765 NM_001145674 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr17-8283 chr17 68288578 68288788 + 4.83 0.000 intron (NM_001174166, intron 1 of 6) MIR3|SINE|MIR 2444 NM_004694 9120 Hs.42645 NM_004694 ENSG00000108932 SLC16A6 MCT6|MCT7 solute carrier family 16 member 6 protein-coding chr19-3955 chr19 58076954 58077164 + 4.83 0.000 Intergenic Intergenic 17777 NM_003436 7694 Hs.85863 NM_003436 ENSG00000176293 ZNF135 ZNF61|ZNF78L1|pHZ-17|pT3 zinc finger protein 135 protein-coding chr10-8413 chr10 84392269 84392479 + 4.83 0.000 intron (NM_018999, intron 3 of 10) intron (NM_018999, intron 3 of 10) -32565 NM_001284243 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr17-7796 chr17 39845528 39845738 + 4.83 0.000 intron (NM_012481, intron 1 of 7) MER58B|DNA|hAT-Charlie 18555 NM_001284514 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr9-7300 chr9 9762995 9763205 + 4.83 0.000 intron (NM_002839, intron 6 of 45) MLT1B|LTR|ERVL-MaLR -36292 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr4-6467 chr4 145566008 145566218 + 4.83 0.000 Intergenic L1PREC2|LINE|L1 -48919 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA chr5-6540 chr5 11071497 11071707 + 4.83 0.000 intron (NM_001288715, intron 15 of 20) intron (NM_001288715, intron 15 of 20) -310368 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr9-6327 chr9 2288300 2288510 + 4.83 0.000 Intergenic LTR1B|LTR|ERV1 129949 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr12-6625 chr12 132809513 132809723 + 4.83 0.000 intron (NM_001172557, intron 4 of 15) LTR13|LTR|ERVK 18771 NM_005895 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr19-5393 chr19 11606227 11606437 + 4.83 0.000 intron (NM_001290083, intron 2 of 4) AluSc8|SINE|Alu 8849 NM_001290085 199692 Hs.526665 NM_145295 ENSG00000198551 ZNF627 - zinc finger protein 627 protein-coding chr8-6329 chr8 49251582 49251792 + 4.83 0.000 Intergenic Intergenic 179343 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr2-4972 chr2 197659394 197659604 + 4.83 0.000 intron (NM_144629, intron 1 of 8) AluSc|SINE|Alu 16088 NM_144629 130132 Hs.591615 NM_144629 ENSG00000162944 RFTN2 C2orf11|Raftlin-2 raftlin family member 2 protein-coding chr2-13864 chr2 178341082 178341292 + 4.83 0.000 intron (NM_001201482, intron 11 of 23) intron (NM_001201482, intron 11 of 23) 20945 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr15-3629 chr15 77771510 77771720 + 4.83 0.000 intron (NM_001301186, intron 2 of 5) intron (NM_001301186, intron 2 of 5) 15434 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr15-2978 chr15 51291232 51291442 + 4.83 0.000 intron (NR_146310, intron 2 of 2) intron (NR_146310, intron 2 of 2) -2999 NM_001347250 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr3-11212 chr3 194322827 194323037 + 4.83 0.000 Intergenic Intergenic -10128 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr2-13887 chr2 180163802 180164012 + 4.83 0.000 Intergenic L1MCc|LINE|L1 -156610 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr3-11249 chr3 197055887 197056097 + 4.83 0.000 intron (NM_001366216, intron 22 of 23) L1M4c|LINE|L1 -26175 NM_033316 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chr20-3283 chr20 8181188 8181398 + 4.83 0.000 intron (NM_182734, intron 2 of 32) intron (NM_182734, intron 2 of 32) 49027 NM_182734 23236 Hs.431173 NM_015192 ENSG00000182621 PLCB1 EIEE12|PI-PLC|PLC-154|PLC-I|PLC-beta-1|PLC154|PLCB1A|PLCB1B phospholipase C beta 1 protein-coding chr5-6580 chr5 25330745 25330955 + 4.83 0.000 Intergenic MER52D|LTR|ERV1 139897 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr11-8435 chr11 109960891 109961101 + 4.83 0.000 Intergenic Intergenic -132396 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr2-12427 chr2 57400829 57401039 + 4.83 0.000 Intergenic Intergenic -506717 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chrX-3435 chrX 20252325 20252535 + 4.83 0.000 intron (NM_004586, intron 1 of 21) L1MD2|LINE|L1 14479 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr17-7282 chr17 3804647 3804857 + 4.83 0.000 3' UTR (NM_001114118, exon 13 of 13) 3' UTR (NM_001114118, exon 13 of 13) -3564 NM_002208 3682 Hs.513867 NM_002208 ENSG00000083457 ITGAE CD103|HUMINAE integrin subunit alpha E protein-coding chr1-10498 chr1 165032577 165032787 + 4.83 0.000 Intergenic AluJr|SINE|Alu -258041 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr18-3149 chr18 41136677 41136887 + 4.83 0.000 Intergenic Intergenic 383895 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr2-11481 chr2 232689609 232689819 + 4.83 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -7617 NR_103493 26058 Hs.565319 NM_015575 ENSG00000204120 GIGYF2 GYF2|PARK11|PERQ2|PERQ3|TNRC15 GRB10 interacting GYF protein 2 protein-coding chr9-6136 chr9 33498605 33498815 + 4.83 0.000 Intergenic Intergenic 12456 NR_003667 441394 Hs.521441 NR_003667 SUGT1P1 SGT1P|SUGT1P|bA255A11.1 SUGT1 pseudogene 1 pseudo chrX-4799 chrX 99862314 99862524 + 4.83 0.000 Intergenic L1MA2|LINE|L1 547854 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr1-8658 chr1 205821013 205821223 + 4.83 0.000 Intergenic AluSq2|SINE|Alu -7920 NM_173854 254428 Hs.20274 NM_173854 ENSG00000133065 SLC41A1 MgtE solute carrier family 41 member 1 protein-coding chr11-5171 chr11 4891951 4892161 + 4.83 0.000 Intergenic Intergenic 10356 NM_001004759 401665 NM_001004759 ENSG00000176900 OR51T1 OR11-26 olfactory receptor family 51 subfamily T member 1 protein-coding chr1-11740 chr1 16403903 16404113 + 4.83 0.000 non-coding (NR_148413, exon 10 of 16) non-coding (NR_148413, exon 10 of 16) 33416 NM_198546 374955 Hs.705501 NM_198546 ENSG00000187144 SPATA21 spergen-2|spergen2 spermatogenesis associated 21 protein-coding chr1-5729 chr1 87095879 87096089 + 4.83 0.000 intron (NM_012262, intron 4 of 6) Charlie1a|DNA|hAT-Charlie -33781 NR_026989 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr8-6302 chr8 43035994 43036204 + 4.83 0.000 Intergenic AluSz|SINE|Alu -20200 NR_033698 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr15-3618 chr15 70869874 70870084 + 4.83 0.000 intron (NM_001284357, intron 1 of 16) intron (NM_001284357, intron 1 of 16) -15822 NM_197958 55323 Hs.416755 NM_018357 ENSG00000166173 LARP6 ACHN La ribonucleoprotein domain family member 6 protein-coding chr21-1655 chr21 25670280 25670490 + 4.83 0.000 intron (NR_072999, intron 1 of 9) AluJo|SINE|Alu 31103 NM_001270407 58494 Hs.517227 NM_021219 ENSG00000154721 JAM2 C21orf43|CD322|JAM-B|JAMB|PRO245|VE-JAM|VEJAM junctional adhesion molecule 2 protein-coding chr22-3840 chr22 32257206 32257416 + 4.83 0.000 intron (NR_149072, intron 2 of 3) MER66B|LTR|ERV1 -1964 NM_014227 6527 Hs.130101 NM_014227 ENSG00000100191 SLC5A4 DJ90G24.4|SAAT1|SGLT3 solute carrier family 5 member 4 protein-coding chr2-13809 chr2 174959553 174959763 + 4.83 0.000 intron (NR_038133, intron 1 of 11) MamGypLTR3a|LTR|Gypsy 45595 NM_001822 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr5-5442 chr5 138150922 138151132 + 4.83 0.000 intron (NM_139199, intron 21 of 26) intron (NM_139199, intron 21 of 26) -11599 NM_003551 8382 Hs.730856 NM_003551 ENSG00000112981 NME5 NM23-H5|NM23H5|RSPH23 NME/NM23 family member 5 protein-coding chr16-3161 chr16 78994892 78995102 + 4.83 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 605740 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr6-8522 chr6 159603177 159603387 + 4.83 0.000 Intergenic Intergenic 89959 NM_001322815 6648 Hs.487046 NM_000636 ENSG00000112096 SOD2 IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD superoxide dismutase 2 protein-coding chr4-6888 chr4 13332614 13332824 + 4.83 0.000 Intergenic L2a|LINE|L2 151621 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr4-5476 chr4 68107957 68108167 + 4.83 0.000 intron (NM_207407, intron 1 of 9) L2a|LINE|L2 21807 NM_207407 389208 Hs.677557 NM_207407 ENSG00000198092 TMPRSS11F - transmembrane serine protease 11F protein-coding chr1-15165 chr1 107421505 107421715 + 4.83 0.000 intron (NM_001113228, intron 6 of 6) intron (NM_001113228, intron 6 of 6) 266889 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr2-13800 chr2 174117438 174117648 + 4.83 0.000 intron (NM_001011708, intron 6 of 9) Tigger16b|DNA|TcMar-Tigger 92263 NR_136175 100128905 Hs.456944 NR_136175 ENSG00000260868 LINC01960 - long intergenic non-protein coding RNA 1960 ncRNA chr10-6377 chr10 874388 874598 + 4.83 0.000 intron (NM_001351277, intron 3 of 17) Charlie14a|DNA|hAT-Charlie 57212 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr12-4471 chr12 15996147 15996357 + 4.83 0.000 intron (NM_015954, intron 6 of 8) intron (NM_015954, intron 6 of 8) 84920 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr5-6036 chr5 169289842 169290052 + 4.83 0.000 intron (NM_003062, intron 1 of 35) intron (NM_003062, intron 1 of 35) 11192 NM_001271946 6586 Hs.552087 NM_003062 ENSG00000184347 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit guidance ligand 3 protein-coding chr2-7996 chr2 67012399 67012609 + 4.83 0.000 Intergenic Intergenic -73942 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA chr11-10409 chr11 114583863 114584073 + 4.83 0.000 intron (NM_017678, intron 2 of 5) intron (NM_017678, intron 2 of 5) 11818 NM_017678 54827 Hs.179100 NM_017678 ENSG00000137634 NXPE4 C11orf33|FAM55D neurexophilin and PC-esterase domain family member 4 protein-coding chr22-3232 chr22 41889631 41889841 + 4.83 0.000 intron (NR_103834, intron 12 of 21) AluSx|SINE|Alu -11208 NR_029507 407039 NR_029507 ENSG00000207932 MIR33A MIR33|MIRN33|MIRN33A|hsa-mir-33|hsa-mir-33a|miR-33|miRNA33A|mir-33a microRNA 33a ncRNA chr15-5247 chr15 98313234 98313444 + 4.83 0.000 Intergenic AluJb|SINE|Alu 18219 NR_146566 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chrX-3108 chrX 153020559 153020769 + 4.83 0.000 Intergenic L1M3|LINE|L1 -26548 NM_001184924 114824 Hs.573567 NM_052926 ENSG00000198883 PNMA5 - PNMA family member 5 protein-coding chr4-3473 chr4 121380796 121381006 + 4.83 0.000 5' UTR (NM_198179, exon 1 of 6) 5' UTR (NM_198179, exon 1 of 6) 117 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr11-10471 chr11 117764115 117764325 + 4.83 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 32996 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr9-6820 chr9 36928757 36928967 + 4.83 0.000 intron (NM_001280548, intron 6 of 8) L4_C_Mam|LINE|RTE-X -35331 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr9-5492 chr9 102028261 102028471 + 4.83 0.000 Intergenic THE1B|LTR|ERVL-MaLR -289786 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chr16-4596 chr16 68270487 68270697 + 4.83 0.000 intron (NM_003983, intron 2 of 10) L1MCc|LINE|L1 6066 NM_001076785 9057 Hs.679580 NM_003983 ENSG00000103064 SLC7A6 LAT-2|LAT3|y+LAT-2 solute carrier family 7 member 6 protein-coding chr6-6200 chr6 13767464 13767674 + 4.83 0.000 Intergenic Intergenic 46991 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chrX-4686 chrX 85257347 85257557 + 4.83 0.000 intron (NM_001330574, intron 5 of 10) L1PA16|LINE|L1 13461 NM_021998 7552 Hs.326801 NM_021998 ENSG00000147180 ZNF711 CMPX1|MRX97|ZNF4|ZNF5|ZNF6|Zfp711|dJ75N13.1 zinc finger protein 711 protein-coding chr12-8034 chr12 113978098 113978308 + 4.83 0.000 Intergenic MIR3|SINE|MIR -11878 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr3-9757 chr3 69574333 69574543 + 4.83 0.000 Intergenic L1PA5|LINE|L1 -165026 NM_001354606 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr4-7551 chr4 77346789 77346999 + 4.83 0.000 Intergenic Intergenic -164859 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding GL877875.1-1 GL877875.1 35925 36135 + 4.83 0.000 NA NA NA NA chr6-6551 chr6 133240858 133241068 + 4.83 0.000 promoter-TSS (NM_001301012) promoter-TSS (NM_001301012) -394 NM_001370459 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr11-9352 chr11 47038640 47038850 + 4.83 0.000 intron (NR_103472, intron 2 of 7) SVA_D|Retroposon|SVA 101984 NM_001003677 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr3-8052 chr3 3429187 3429397 + 4.83 0.000 Intergenic Intergenic -249575 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr3-8610 chr3 167251265 167251475 + 4.83 0.000 intron (NM_001199202, intron 19 of 20) LTR1A2|LTR|ERV1 128913 NM_001199202 79740 Hs.478143 NM_024687 ENSG00000169064 ZBBX - zinc finger B-box domain containing protein-coding chr21-1763 chr21 36005344 36005554 + 4.83 0.000 promoter-TSS (NR_110418) promoter-TSS (NR_110418) 129 NR_110419 100996609 Hs.742062 NR_110419 LINC01436 - long intergenic non-protein coding RNA 1436 ncRNA chr11-10313 chr11 108628959 108629169 + 4.83 0.000 Intergenic MER52A|LTR|ERV1 -35296 NM_001308019 23086 Hs.28540 NM_015065 ENSG00000110723 EXPH5 SLAC2-B|SLAC2B exophilin 5 protein-coding chrX-4760 chrX 95178651 95178861 + 4.83 0.000 Intergenic MSTA|LTR|ERVL-MaLR -115530 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr14-4873 chr14 71145941 71146151 + 4.83 0.000 Intergenic Intergenic -174430 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr17-7628 chr17 28181698 28181908 + 4.83 0.000 intron (NM_016231, intron 7 of 10) AluJo|SINE|Alu -44760 NR_003064 23615 Hs.157195 NM_021093 ENSG00000237575 PYY2 - peptide YY 2 (pseudogene) pseudo chr6-7673 chr6 85182630 85182840 + 4.83 0.000 Intergenic Intergenic 207451 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr4-7811 chr4 98922993 98923203 + 4.83 0.000 intron (NM_001331017, intron 1 of 7) AluSp|SINE|Alu 6035 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr10-4749 chr10 2679949 2680159 + 4.83 0.000 Intergenic Intergenic -178592 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr9-6863 chr9 78244093 78244303 + 4.83 0.000 intron (NM_001349840, intron 5 of 15) AluJo|SINE|Alu 8123 NM_001349840 84131 Hs.187621 NM_032171 ENSG00000148019 CEP78 C9orf81|CRDHL|IP63 centrosomal protein 78 protein-coding KI270772.1-3 KI270772.1 33157 33367 + 4.83 0.000 NA NA NA NA chr7-8194 chr7 31482069 31482279 + 4.83 0.000 Intergenic MER31A|LTR|ERV1 -31897 NM_001257967 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding chr2-10043 chr2 31193866 31194076 + 4.83 0.000 intron (NM_001145122, intron 9 of 21) intron (NM_001145122, intron 9 of 21) 23544 NM_001145122 440854 Hs.468059 NM_001145122 ENSG00000214711 CAPN14 - calpain 14 protein-coding chr5-6999 chr5 152097127 152097337 + 4.83 0.000 intron (NR_109876, intron 1 of 2) intron (NR_109876, intron 1 of 2) 138334 NR_109876 101927115 Hs.549665 NR_109876 ENSG00000254226 LINC01933 CTB-12O2.1 long intergenic non-protein coding RNA 1933 ncRNA chr1-12769 chr1 74621882 74622092 + 4.83 0.000 non-coding (NR_121671, exon 3 of 3) non-coding (NR_121671, exon 3 of 3) 32252 NR_121670 101927320 Hs.662589 NR_121670 ENSG00000234497 ERICH3-AS1 - ERICH3 antisense RNA 1 ncRNA chr3-10732 chr3 155223732 155223942 + 4.83 0.000 Intergenic L1PA10|LINE|L1 -17108 NR_125399 101928190 Hs.121410 NR_125399 ENSG00000241336 LINC01487 - long intergenic non-protein coding RNA 1487 ncRNA chr7-6353 chr7 149748332 149748542 + 4.83 0.000 Intergenic Intergenic 25151 NM_207336 168544 Hs.726477 NM_207336 ENSG00000181444 ZNF467 EZI|Zfp467 zinc finger protein 467 protein-coding chr20-3390 chr20 37089580 37089790 + 4.83 0.000 intron (NM_002895, intron 1 of 21) intron (NM_002895, intron 1 of 21) 6312 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr3-7100 chr3 181546608 181546818 + 4.83 0.000 intron (NR_075091, intron 3 of 7) AluY|SINE|Alu -63621 NR_004053 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr2-11650 chr2 6525556 6525766 + 4.83 0.000 Intergenic Intergenic 108126 NR_110500 102800315 Hs.729713 NR_110498 ENSG00000236172 LINC01246 - long intergenic non-protein coding RNA 1246 ncRNA chr6-3703 chr6 166673137 166673347 + 4.83 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -45991 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr3-6592 chr3 125303292 125303502 + 4.83 0.000 intron (NM_001348436, intron 5 of 8) MER1A|DNA|hAT-Charlie 53883 NM_001348433 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chrX-3950 chrX 11083873 11084083 + 4.83 0.000 Intergenic LTR33B|LTR|ERVL -27354 NM_001122608 3052 Hs.211571 NM_005333 ENSG00000004961 HCCS CCHL|LSDMCA1|MCOPS7|MLS holocytochrome c synthase protein-coding chr5-7728 chr5 59269337 59269547 + 4.83 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 6673 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr7-4760 chr7 74248205 74248415 + 4.83 0.000 intron (NM_001278792, intron 3 of 9) AluJr4|SINE|Alu 6089 NM_181471 5982 Hs.647062 NM_002914 ENSG00000049541 RFC2 RFC40 replication factor C subunit 2 protein-coding chr15-4517 chr15 53168033 53168243 + 4.83 0.000 Intergenic Intergenic 51773 NR_147181 105370822 Hs.527821 NR_147181 ENSG00000259237 LINC02490 - long intergenic non-protein coding RNA 2490 ncRNA chr16-5538 chr16 27188136 27188346 + 4.83 0.000 Intergenic FLAM_C|SINE|Alu -15285 NM_024773 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr2-13702 chr2 165988593 165988803 + 4.83 0.000 non-coding (NR_148667, exon 29 of 29) non-coding (NR_148667, exon 29 of 29) 31280 NR_110598 102724058 Hs.570269 NR_110598 ENSG00000236107 LOC102724058 - uncharacterized LOC102724058 ncRNA chr16-6425 chr16 56345324 56345534 + 4.83 0.000 3' UTR (NM_138736, exon 8 of 8) 3' UTR (NM_138736, exon 8 of 8) 79560 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr13-3552 chr13 24598468 24598678 + 4.83 0.000 TTS (NR_002815) TTS (NR_002815) 18365 NR_002815 374491 Hs.406779 NR_002815 TPTE2P6 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6 pseudo chrX-904 chrX 109140886 109141096 + 4.83 0.000 Intergenic AluSx|SINE|Alu 341095 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr7-3154 chr7 74925777 74925987 + 4.83 0.000 Intergenic Intergenic 35114 NR_027776 5383 Hs.292996 NM_174930 PMS2P5 PMS2L5|PMS7 PMS1 homolog 2, mismatch repair system component pseudogene 5 pseudo chr1-10332 chr1 153188715 153188925 + 4.83 0.000 intron (NR_110685, intron 2 of 2) L1PA8|LINE|L1 14302 NR_110685 101928009 Hs.385720 NR_110685 ENSG00000229699 LOC101928009 - uncharacterized LOC101928009 ncRNA chr1-15006 chr1 92367068 92367278 + 4.83 0.000 intron (NM_024813, intron 11 of 12) intron (NM_024813, intron 11 of 12) 68114 NM_024813 79871 Hs.444421 NM_024813 ENSG00000122484 RPAP2 C1orf82|Rtr1 RNA polymerase II associated protein 2 protein-coding chr2-12212 chr2 42844976 42845186 + 4.83 0.000 Intergenic Intergenic -52498 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr9-6181 chr9 86068609 86068819 + 4.83 0.000 intron (NM_016548, intron 3 of 9) MLT1G1|LTR|ERVL-MaLR 30844 NM_016548 51280 Hs.494337 NM_016548 ENSG00000135052 GOLM1 C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 golgi membrane protein 1 protein-coding chr2-13396 chr2 139977789 139977999 + 4.83 0.000 Intergenic AluJo|SINE|Alu 608791 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr5-9107 chr5 173211016 173211226 + 4.83 0.000 Intergenic Intergenic 24085 NM_001166175 1482 Hs.54473 NM_004387 ENSG00000183072 NKX2-5 CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3 NK2 homeobox 5 protein-coding chr21-1807 chr21 39273345 39273555 + 4.83 0.000 intron (NM_018963, intron 13 of 41) intron (NM_018963, intron 13 of 41) 40182 NM_018963 54014 Hs.627139 NM_018963 ENSG00000185658 BRWD1 C21orf107|DCAF19|N143|WDR9|WRD9 bromodomain and WD repeat domain containing 1 protein-coding chr16-6294 chr16 35576282 35576492 + 4.83 0.000 Intergenic Intergenic -69217 NR_034018 100130700 Hs.97712 NR_034018 TP53TG3HP - TP53 target 3 family member H, pseudogene pseudo chr1-5489 chr1 150851026 150851236 + 4.83 0.000 intron (NM_001286036, intron 3 of 21) SVA_C|Retroposon|SVA 25468 NM_178427 405 Hs.632446 NM_001668 ENSG00000143437 ARNT HIF-1-beta|HIF-1beta|HIF1-beta|HIF1B|HIF1BETA|TANGO|bHLHe2 aryl hydrocarbon receptor nuclear translocator protein-coding chr3-8308 chr3 61671289 61671499 + 4.83 0.000 intron (NM_002841, intron 1 of 29) SVA_D|Retroposon|SVA 109823 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr1-15060 chr1 95121131 95121341 + 4.83 0.000 intron (NM_001199691, intron 1 of 7) intron (NM_001199691, intron 1 of 7) 3313 NM_001199691 100527978 Hs.483512 NM_001199691 ENSG00000271092 TLCD4-RWDD3 TMEM56-RWDD3 TLCD4-RWDD3 readthrough protein-coding chr22-2943 chr22 48047266 48047476 + 4.83 0.000 Intergenic AluSx|SINE|Alu -226993 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr1-12723 chr1 56727016 56727226 + 4.83 0.000 intron (NM_001004303, intron 15 of 19) MIR|SINE|MIR -81803 NR_135111 101929935 NR_135111 LOC101929935 - uncharacterized LOC101929935 ncRNA chr2-4361 chr2 3951335 3951545 + 4.83 0.000 Intergenic Intergenic 22592 NR_037881 100505964 Hs.190267 NR_037881 ENSG00000237401 LINC01304 - long intergenic non-protein coding RNA 1304 ncRNA chr5-8731 chr5 145203673 145203883 + 4.83 0.000 Intergenic Intergenic 631564 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr2-10022 chr2 26327483 26327693 + 4.83 0.000 intron (NR_135916, intron 1 of 12) MSTD|LTR|ERVL-MaLR -8486 NM_001145169 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr2-13964 chr2 187910084 187910294 + 4.83 0.000 Intergenic Intergenic -355684 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr9-7528 chr9 33907414 33907624 + 4.83 0.000 intron (NM_017811, intron 3 of 4) intron (NM_017811, intron 3 of 4) 26845 NM_001282530 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr10-7610 chr10 21432804 21433014 + 4.83 0.000 Intergenic Intergenic -59959 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr3-10894 chr3 170982254 170982464 + 4.83 0.000 Intergenic AluJb|SINE|Alu 44361 NM_001278659 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr20-2465 chr20 31823507 31823717 + 4.83 0.000 intron (NM_033118, intron 5 of 12) intron (NM_033118, intron 5 of 12) 4237 NM_033118 85366 Hs.86092 NM_033118 ENSG00000101306 MYLK2 KMLC|MLCK|MLCK2|skMLCK myosin light chain kinase 2 protein-coding chr5-8810 chr5 149760603 149760813 + 4.83 0.000 intron (NM_001172698, intron 1 of 10) intron (NM_001172698, intron 1 of 10) -11232 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr1-13235 chr1 217523706 217523916 + 4.83 0.000 intron (NM_018040, intron 5 of 9) SVA_D|Retroposon|SVA 107279 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr12-6519 chr12 109172323 109172533 + 4.83 0.000 intron (NM_001093, intron 6 of 52) intron (NM_001093, intron 6 of 52) 55841 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr5-8956 chr5 160056692 160056902 + 4.83 0.000 intron (NM_003314, intron 7 of 7) intron (NM_003314, intron 7 of 7) 47658 NM_003314 7265 Hs.519718 NM_003314 ENSG00000113312 TTC1 TPR1 tetratricopeptide repeat domain 1 protein-coding chr2-10260 chr2 120438749 120438959 + 4.83 0.000 Intergenic Intergenic 27495 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr10-9008 chr10 121828557 121828767 + 4.83 0.000 intron (NM_001001976, intron 10 of 11) MLT1H2|LTR|ERVL-MaLR 99369 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr2-9614 chr2 1307033 1307243 + 4.83 0.000 intron (NM_018968, intron 14 of 16) (TG)n|Simple_repeat|Simple_repeat -106323 NM_000547 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chr1-16676 chr1 244283321 244283531 + 4.83 0.000 Intergenic Intergenic -69209 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr6-5831 chr6 25917230 25917440 + 4.83 0.000 intron (NM_001286123, intron 6 of 11) intron (NM_001286123, intron 6 of 11) 8544 NM_001286125 10246 Hs.591802 NM_005835 ENSG00000112337 SLC17A2 NPT3 solute carrier family 17 member 2 protein-coding ML143350.1-1 ML143350.1 43232 43442 + 4.83 0.000 NA NA NA NA chr7-8132 chr7 27606196 27606406 + 4.83 0.000 intron (NM_152740, intron 4 of 7) intron (NM_152740, intron 4 of 7) -9673 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr14-5298 chr14 101029270 101029480 + 4.83 0.000 promoter-TSS (NR_036132) promoter-TSS (NR_036132) -259 NR_030174 574452 NR_030174 ENSG00000194717 MIR494 MIRN494|hsa-mir-494|mir-494 microRNA 494 ncRNA chr16-6074 chr16 11554364 11554574 + 4.83 0.000 intron (NM_004862, intron 2 of 3) intron (NM_004862, intron 2 of 3) -27222 NM_001370704 400499 Hs.459937 NM_001370704 ENSG00000188897 LOC400499 - putative uncharacterized protein LOC400499 protein-coding chr7-7001 chr7 120337384 120337594 + 4.83 0.000 intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 64314 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding chr12-7822 chr12 99683087 99683297 + 4.83 0.000 intron (NM_152788, intron 8 of 25) THE1B|LTR|ERVL-MaLR 35439 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr11-9264 chr11 44145054 44145264 + 4.83 0.000 intron (NM_001178083, intron 8 of 14) intron (NM_001178083, intron 8 of 14) 48962 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr4-3345 chr4 3094463 3094673 + 4.83 0.000 intron (NM_002111, intron 2 of 66) SVA_B|Retroposon|SVA 19887 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr16-4608 chr16 69287214 69287424 + 4.83 0.000 intron (NM_006750, intron 5 of 6) AluSx1|SINE|Alu -24031 NM_013245 27183 Hs.128420 NM_013245 ENSG00000132612 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A protein-coding chr9-6971 chr9 107440042 107440252 + 4.83 0.000 intron (NR_121581, intron 4 of 7) intron (NR_121581, intron 4 of 7) 26438 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr3-8599 chr3 161812074 161812284 + 4.83 0.000 Intergenic Intergenic 315371 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr17-4722 chr17 32719249 32719459 + 4.83 0.000 intron (NM_015194, intron 15 of 21) AluY|SINE|Alu 157770 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr7-8031 chr7 19420747 19420957 + 4.83 0.000 Intergenic Intergenic -275431 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chr5-6160 chr5 45295319 45295529 + 4.83 0.000 intron (NM_021072, intron 6 of 7) intron (NM_021072, intron 6 of 7) 400956 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr7-9717 chr7 156611111 156611321 + 4.83 0.000 intron (NR_026865, intron 1 of 3) L3|LINE|CR1 -8021 NR_103858 100506380 Hs.647014 NM_032625 ENSG00000182648 LINC01006 C7orf13|MY040 long intergenic non-protein coding RNA 1006 ncRNA chr3-11027 chr3 181929554 181929764 + 4.83 0.000 Intergenic L2c|LINE|L2 -22705 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr1-8876 chr1 4489581 4489791 + 4.83 0.000 Intergenic G-rich|Low_complexity|Low_complexity 77635 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr12-6029 chr12 109228621 109228831 + 4.83 0.000 intron (NM_001093, intron 28 of 52) MER3|DNA|hAT-Charlie 80558 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr9-7832 chr9 82976088 82976298 + 4.83 0.000 Intergenic Intergenic 86949 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr6-8245 chr6 137444082 137444292 + 4.83 0.000 Intergenic L1M2|LINE|L1 50207 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr20-3844 chr20 24834439 24834649 + 4.83 0.000 Intergenic MIRb|SINE|MIR -114725 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr14-3209 chr14 73706884 73707094 + 4.83 0.000 Intergenic HERVH-int|LTR|ERV1 7395 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding chr2-12536 chr2 66193358 66193568 + 4.83 0.000 Intergenic Intergenic 164865 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr21-1354 chr21 35747409 35747619 + 4.83 0.000 Intergenic Intergenic 26799 NR_030414 768219 NR_030414 ENSG00000211590 MIR802 MIRN802|hsa-mir-802 microRNA 802 ncRNA chr7-9078 chr7 104998221 104998431 + 4.83 0.000 Intergenic Intergenic -7161 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr18-1497 chr18 78083161 78083371 + 4.83 0.000 Intergenic Intergenic -89539 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr10-6285 chr10 93587956 93588166 + 4.83 0.000 3' UTR (NM_001195755, exon 3 of 3) 3' UTR (NM_001195755, exon 3 of 3) 13174 NM_006744 5950 Hs.50223 NM_006744 ENSG00000138207 RBP4 MCOPCB10|RDCCAS retinol binding protein 4 protein-coding chr1-15046 chr1 94247739 94247949 + 4.83 0.000 promoter-TSS (NM_001328664) promoter-TSS (NM_001328664) -98 NM_001328665 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr13-4391 chr13 109308018 109308228 + 4.83 0.000 Intergenic LTR16A2|LTR|ERVL -92573 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr2-12687 chr2 76014433 76014643 + 4.83 0.000 Intergenic Intergenic -303623 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr15-4068 chr15 69503922 69504132 + 4.83 0.000 Intergenic Intergenic 51209 NM_001003 6176 Hs.356502 NM_001003 ENSG00000137818 RPLP1 LP1|P1|RPP1 ribosomal protein lateral stalk subunit P1 protein-coding chr5-7078 chr5 174738977 174739187 + 4.83 0.000 Intergenic MIR1_Amn|SINE|MIR -12652 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr3-10896 chr3 171018640 171018850 + 4.83 0.000 intron (NM_001278658, intron 1 of 9) intron (NM_001278658, intron 1 of 9) 7975 NM_001278659 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr20-2826 chr20 59452733 59452943 + 4.83 0.000 Intergenic L2b|LINE|L2 -124671 NM_001199505 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr19-3656 chr19 5008823 5009033 + 4.83 0.000 intron (NM_001370094, intron 1 of 10) AluSz6|SINE|Alu 39815 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr5-6008 chr5 144842171 144842381 + 4.83 0.000 Intergenic AluSx1|SINE|Alu 636885 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr9-7809 chr9 80983583 80983793 + 4.83 0.000 Intergenic Intergenic 705847 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr8-3000 chr8 106810988 106811198 + 4.83 0.000 Intergenic Intergenic -40849 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr16-5148 chr16 1844131 1844341 + 4.83 0.000 intron (NM_001163560, intron 10 of 13) AluSx1|SINE|Alu 17012 NM_001018104 81889 Hs.513265 NM_031208 ENSG00000180185 FAHD1 C16orf36|YISKL fumarylacetoacetate hydrolase domain containing 1 protein-coding chr5-4183 chr5 109219966 109220176 + 4.83 0.000 Intergenic Intergenic 106298 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr7-7653 chr7 147022380 147022590 + 4.83 0.000 intron (NM_014141, intron 2 of 22) (TA)n|Simple_repeat|Simple_repeat 75124 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr2-10119 chr2 63727718 63727928 + 4.83 0.000 Intergenic L1PA15|LINE|L1 -113141 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr10-6838 chr10 22436939 22437149 + 4.83 0.000 non-coding (NR_036533, exon 1 of 1) non-coding (NR_036533, exon 1 of 1) 885 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr7-9153 chr7 112023126 112023336 + 4.83 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 183168 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr2-8562 chr2 135023444 135023654 + 4.83 0.000 promoter-TSS (NM_001321177) promoter-TSS (NM_001321177) 100 NM_001321177 80122 Hs.659395 NM_025052 ENSG00000176601 MAP3K19 RCK|YSK4 mitogen-activated protein kinase kinase kinase 19 protein-coding chr20-3597 chr20 4800988 4801198 + 4.83 0.000 intron (NM_014737, intron 2 of 11) intron (NM_014737, intron 2 of 11) 14030 NM_170774 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr8-6265 chr8 41597188 41597398 + 4.83 0.000 intron (NM_001363197, intron 1 of 12) intron (NM_001363197, intron 1 of 12) 18777 NM_001363197 137964 Hs.355753 NM_178819 ENSG00000158669 GPAT4 1-AGPAT 6|AGPAT6|LPAAT-zeta|LPAATZ|TSARG7 glycerol-3-phosphate acyltransferase 4 protein-coding chr7-9707 chr7 155586739 155586949 + 4.83 0.000 Intergenic HAL1|LINE|L1 -16098 NM_001369813 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr13-4199 chr13 91395410 91395620 + 4.83 0.000 Intergenic Intergenic -3106 NM_004466 2262 Hs.655675 NM_004466 ENSG00000179399 GPC5 - glypican 5 protein-coding chr12-3630 chr12 85182796 85183006 + 4.83 0.000 intron (NM_001079910, intron 24 of 26) intron (NM_001079910, intron 24 of 26) -97319 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr3-5064 chr3 42437930 42438140 + 4.83 0.000 Intergenic AluSq|SINE|Alu -27425 NM_001304386 131375 Hs.234895 NM_144634 ENSG00000157093 LYZL4 LYC4|LYZA lysozyme like 4 protein-coding chrX-1648 chrX 133759547 133759757 + 4.83 0.000 intron (NM_001164619, intron 1 of 6) L1MC2|LINE|L1 -137791 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr22-3100 chr22 48694129 48694339 + 4.83 0.000 intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) -86061 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr9-6998 chr9 113587521 113587731 + 4.83 0.000 intron (NM_001282922, intron 3 of 7) intron (NM_001282922, intron 3 of 7) -6294 NM_144489 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr11-10395 chr11 113633055 113633265 + 4.83 0.000 Intergenic Intergenic 73148 NM_001288752 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding chr9-4464 chr9 27573269 27573479 + 4.83 0.000 intron (NM_145005, intron 1 of 4) CpG 107 NM_018325 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding chr2-13639 chr2 160228432 160228642 + 4.83 0.000 Intergenic Intergenic -28224 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr14-4525 chr14 39981741 39981951 + 4.83 0.000 Intergenic Intergenic -549346 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr19-5741 chr19 18408289 18408499 + 4.83 0.000 Intergenic Intergenic -10772 NM_145256 126364 Hs.332156 NM_145256 ENSG00000175489 LRRC25 MAPA leucine rich repeat containing 25 protein-coding chr6-8021 chr6 118220630 118220840 + 4.83 0.000 intron (NM_001029858, intron 2 of 7) intron (NM_001029858, intron 2 of 7) 134832 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr12-6909 chr12 23809726 23809936 + 4.83 0.000 intron (NM_152989, intron 6 of 17) intron (NM_152989, intron 6 of 17) 139839 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr12-6217 chr12 26737129 26737339 + 4.83 0.000 intron (NM_002223, intron 2 of 56) intron (NM_002223, intron 2 of 56) 95960 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chrX-5196 chrX 134285737 134285947 + 4.83 0.000 Intergenic SVA_B|Retroposon|SVA 48629 NM_001353453 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr2-11136 chr2 138802009 138802219 + 4.83 0.000 Intergenic MIRb|SINE|MIR -21724 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chr15-5016 chr15 81826182 81826392 + 4.83 0.000 Intergenic Intergenic 219731 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr1-13265 chr1 226143474 226143684 + 4.83 0.000 Intergenic AluSz6|SINE|Alu -4424 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr15-3665 chr15 25667912 25668122 + 4.83 0.000 Intergenic Intergenic 180808 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr4-7135 chr4 37353058 37353268 + 4.83 0.000 intron (NM_001144990, intron 2 of 6) L1P2|LINE|L1 -100762 NM_001104629 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr5-8892 chr5 155693830 155694040 + 4.83 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -632822 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr14-4418 chr14 31518076 31518286 + 4.83 0.000 Intergenic AluSz|SINE|Alu -30142 NM_001197184 2856 Hs.727479 NM_001197184 ENSG00000214943 GPR33 - G protein-coupled receptor 33 (gene/pseudogene) protein-coding chr20-2146 chr20 37013495 37013705 + 4.83 0.000 intron (NM_002895, intron 19 of 21) SVA_D|Retroposon|SVA -61757 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr6-7204 chr6 39305492 39305702 + 4.83 0.000 intron (NM_001135111, intron 2 of 5) intron (NM_001135111, intron 2 of 5) 8822 NM_001135111 89822 Hs.162282 NM_031460 ENSG00000124780 KCNK17 K2p17.1|TALK-2|TALK2|TASK-4|TASK4 potassium two pore domain channel subfamily K member 17 protein-coding chrX-3079 chrX 123736349 123736559 + 4.83 0.000 Intergenic MER20|DNA|hAT-Charlie -3402 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr16-6276 chr16 31298718 31298928 + 4.83 0.000 intron (NM_001145808, intron 14 of 29) MER45A|DNA|hAT-Tip100 38848 NM_000632 3684 Hs.172631 NM_000632 ENSG00000169896 ITGAM CD11B|CR3A|MAC-1|MAC1A|MO1A|SLEB6 integrin subunit alpha M protein-coding chr11-9986 chr11 78276051 78276261 + 4.83 0.000 intron (NM_012296, intron 2 of 9) FRAM|SINE|Alu 65724 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr2-5646 chr2 193580309 193580519 + 4.83 0.000 Intergenic AluSx3|SINE|Alu -763855 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr3-9222 chr3 37855562 37855772 + 4.83 0.000 intron (NR_110532, intron 1 of 5) intron (NR_110532, intron 1 of 5) 6113 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr6-3908 chr6 71055854 71056064 + 4.83 0.000 Intergenic Intergenic -98899 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr7-6808 chr7 31212663 31212873 + 4.83 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 127958 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr13-4048 chr13 74620812 74621022 + 4.83 0.000 Intergenic Intergenic 68074 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr10-4177 chr10 96822158 96822368 + 4.83 0.000 Intergenic Intergenic 6501 NR_030338 693192 NR_030338 ENSG00000207976 MIR607 MIRN607|hsa-mir-607 microRNA 607 ncRNA chr5-3746 chr5 40102598 40102808 + 4.83 0.000 Intergenic LTR1A1|LTR|ERV1 50412 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr12-5949 chr12 79707503 79707713 + 4.83 0.000 Intergenic Intergenic -16511 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr12-3392 chr12 103890847 103891057 + 4.83 0.000 intron (NR_027249, intron 6 of 15) intron (NR_027249, intron 6 of 15) 39259 NR_027249 253724 Hs.506549 NR_027249 ENSG00000214198 TTC41P GNN|GNNP tetratricopeptide repeat domain 41, pseudogene pseudo chr10-3906 chr10 69191063 69191273 + 4.83 0.000 intron (NM_001323586, intron 6 of 15) intron (NM_001323586, intron 6 of 15) 10934 NM_003171 6832 Hs.106469 NM_003171 ENSG00000156502 SUPV3L1 SUV3 Suv3 like RNA helicase protein-coding chr15-3862 chr15 89936144 89936354 + 4.83 0.000 Intergenic L1MEi|LINE|L1 -23297 NM_182616 348110 Hs.6734 NM_182616 ENSG00000242498 ARPIN C15orf38 actin related protein 2/3 complex inhibitor protein-coding chr5-7196 chr5 6760020 6760230 + 4.83 0.000 Intergenic Intergenic -35755 NR_146281 109729133 Hs.582455 NR_146281 ENSG00000251365 LINC02236 - long intergenic non-protein coding RNA 2236 ncRNA chr14-3077 chr14 62250423 62250633 + 4.83 0.000 Intergenic (TCTC)n|Simple_repeat|Simple_repeat -110555 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr13-4093 chr13 78027278 78027488 + 4.83 0.000 intron (NR_047028, intron 2 of 5) intron (NR_047028, intron 2 of 5) 14500 NR_047028 100874175 Hs.130364 NR_047028 LINC00446 - long intergenic non-protein coding RNA 446 ncRNA chr14-4803 chr14 66767504 66767714 + 4.83 0.000 intron (NM_001024218, intron 2 of 21) intron (NM_001024218, intron 2 of 21) 260202 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr9-6264 chr9 130158049 130158259 + 4.83 0.000 Intergenic Intergenic -13935 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr10-4268 chr10 1209348 1209558 + 4.83 0.000 intron (NM_018702, intron 7 of 9) intron (NM_018702, intron 7 of 9) 49685 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr6-7994 chr6 115954514 115954724 + 4.83 0.000 intron (NM_002031, intron 5 of 7) L2a|LINE|L2 -84112 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo chr4-3488 chr4 135941215 135941425 + 4.83 0.000 Intergenic AluYa5|SINE|Alu -27640 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr18-2631 chr18 38651493 38651703 + 4.83 0.000 Intergenic AluJo|SINE|Alu 970577 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr9-7603 chr9 36980432 36980642 + 4.83 0.000 intron (NM_001280554, intron 4 of 8) intron (NM_001280554, intron 4 of 8) 53731 NM_016734 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr12-5819 chr12 27229343 27229553 + 4.83 0.000 Intergenic L2a|LINE|L2 -14838 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr5-7429 chr5 29378323 29378533 + 4.83 0.000 Intergenic Intergenic 17548 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA chr19-5496 chr19 44702928 44703138 + 4.83 0.000 intron (NM_001039213, intron 2 of 6) MIR|SINE|MIR 3882 NM_001039213 388551 Hs.456381 NM_001039213 ENSG00000213892 CEACAM16 CEAL2|DFNA4B|DFNB113 carcinoembryonic antigen related cell adhesion molecule 16 protein-coding chr22-2052 chr22 44368017 44368227 + 4.83 0.000 Intergenic AluSq2|SINE|Alu -55171 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chrX-3185 chrX 40628806 40629016 + 4.83 0.000 3' UTR (NM_144970, exon 7 of 7) 3' UTR (NM_144970, exon 7 of 7) 5345 NM_001195522 347411 Hs.128084 NM_001195522 ENSG00000238205 MPC1L SLC54A3 mitochondrial pyruvate carrier 1 like protein-coding chr20-4147 chr20 43973915 43974125 + 4.83 0.000 intron (NM_001098797, intron 2 of 8) intron (NM_001098797, intron 2 of 8) 28124 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr8-5263 chr8 134956211 134956421 + 4.83 0.000 Intergenic Intergenic 106381 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr10-5081 chr10 44576088 44576298 + 4.83 0.000 Intergenic Intergenic -191096 NM_001178134 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr12-4254 chr12 114523403 114523613 + 4.83 0.000 Intergenic (TTATA)n|Simple_repeat|Simple_repeat -115066 NM_000192 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box transcription factor 5 protein-coding chr10-7855 chr10 47146326 47146536 + 4.83 0.000 Intergenic Intergenic -153766 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr4-7302 chr4 54073522 54073732 + 4.83 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -9022 NM_012110 26511 Hs.335393 NM_012110 ENSG00000109220 CHIC2 BTL cysteine rich hydrophobic domain 2 protein-coding chr1-12041 chr1 112544199 112544409 + 4.83 0.000 intron (NM_138728, intron 12 of 13) intron (NM_138728, intron 12 of 13) 35339 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr6-6492 chr6 116221113 116221323 + 4.83 0.000 exon (NM_152729, exon 7 of 12) exon (NM_152729, exon 7 of 12) 32857 NM_021648 23270 Hs.284141 NM_021648 ENSG00000187189 TSPYL4 dJ486I3.2 TSPY like 4 protein-coding chr10-8558 chr10 94579316 94579526 + 4.83 0.000 intron (NM_001289074, intron 11 of 22) AluY|SINE|Alu 33633 NM_001289075 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding chr4-6977 chr4 21441966 21442176 + 4.83 0.000 intron (NM_147182, intron 2 of 8) (TTTTG)n|Simple_repeat|Simple_repeat 22687 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr1-14411 chr1 44725272 44725482 + 4.83 0.000 exon (NM_001145636, exon 12 of 12) exon (NM_001145636, exon 12 of 12) -3476 NR_002753 26828 NR_002753 ENSG00000199377 RNU5F-1 RNU5F|U5F RNA, U5F small nuclear 1 snRNA chr5-7231 chr5 9520226 9520436 + 4.83 0.000 intron (NM_003966, intron 1 of 22) L2a|LINE|L2 8998 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr11-9403 chr11 57911786 57911996 + 4.83 0.000 Intergenic MER102c|DNA|hAT-Charlie -111990 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr11-9189 chr11 36492914 36493124 + 4.83 0.000 intron (NM_145803, intron 6 of 7) intron (NM_145803, intron 6 of 7) 17253 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr14-3599 chr14 43553257 43553467 + 4.83 0.000 Intergenic L1MA9|LINE|L1 953921 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr2-4829 chr2 64609336 64609546 + 4.83 0.000 intron (NR_034023, intron 1 of 3) CpG 2129 NR_034023 339807 Hs.434736 NR_034023 ENSG00000233694 LINC02579 - long intergenic non-protein coding RNA 2579 ncRNA chr9-4843 chr9 178276 178486 + 4.83 0.000 intron (NM_001145355, intron 1 of 15) intron (NM_001145355, intron 1 of 15) 694 NM_018491 55871 Hs.531330 NM_018491 ENSG00000172785 CBWD1 COBP COBW domain containing 1 protein-coding chr3-5268 chr3 114346916 114347126 + 4.83 0.000 intron (NR_121662, intron 6 of 6) intron (NR_121662, intron 6 of 6) -4790 NR_038993 100131117 Hs.122417 NR_038993 ENSG00000241560 ZBTB20-AS1 - ZBTB20 antisense RNA 1 ncRNA chr4-8772 chr4 188325876 188326086 + 4.83 0.000 Intergenic Intergenic -129597 NR_033869 401164 Hs.435756 NR_033869 ENSG00000249378 LINC01060 - long intergenic non-protein coding RNA 1060 ncRNA chrX-3519 chrX 47896501 47896711 + 4.83 0.000 intron (NM_007137, intron 4 of 4) L1ME1|LINE|L1 59704 NM_007137 347344 Hs.114246 NM_007137 ENSG00000197779 ZNF81 HFZ20|MRX45|dJ54B20.6 zinc finger protein 81 protein-coding chr10-8212 chr10 72880831 72881041 + 4.83 0.000 intron (NM_138357, intron 6 of 7) AluJr|SINE|Alu -12803 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr2-13503 chr2 149808713 149808923 + 4.83 0.000 intron (NR_145421, intron 2 of 4) HAL1|LINE|L1 50373 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr8-5114 chr8 62767778 62767988 + 4.83 0.000 intron (NM_001304533, intron 4 of 6) MER33|DNA|hAT-Charlie -209978 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr4-7865 chr4 103442601 103442811 + 4.83 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 17664 NR_125925 101929448 Hs.570839 NR_125925 ENSG00000248740 LINC02428 - long intergenic non-protein coding RNA 2428 ncRNA chr9-7174 chr9 135246515 135246725 + 4.83 0.000 Intergenic Intergenic 65011 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chr17-7267 chr17 2896756 2896966 + 4.83 0.000 intron (NM_001330058, intron 2 of 24) intron (NM_001330058, intron 2 of 24) 69034 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr5-9132 chr5 175616217 175616427 + 4.83 0.000 Intergenic MIRb|SINE|MIR -41749 NR_160284 3274 Hs.247885 NM_022304 ENSG00000113749 HRH2 H2R|HH2R histamine receptor H2 protein-coding chr7-9212 chr7 117240303 117240513 + 4.83 0.000 Intergenic Intergenic 57727 NR_002332 93655 Hs.368131 NR_002332 ENSG00000004866 ST7-OT3 NCRNA00026|ST7|ST7OT3 ST7 overlapping transcript 3 ncRNA chr1-14768 chr1 68631001 68631211 + 4.83 0.000 Intergenic Intergenic -134024 NM_017779 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding chrX-1725 chrX 29411604 29411814 + 4.83 0.000 intron (NM_014271, intron 5 of 10) intron (NM_014271, intron 5 of 10) -162569 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr8-3066 chr8 17808310 17808520 + 4.83 0.000 Intergenic Intergenic -6836 NM_001363061 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chrX-3663 chrX 102109835 102110045 + 4.83 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -15739 NM_080390 140597 Hs.401835 NM_080390 ENSG00000184905 TCEAL2 MY0876G05|WEX1|my048 transcription elongation factor A like 2 protein-coding chr8-2951 chr8 40926384 40926594 + 4.83 0.000 Intergenic Intergenic -28663 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr7-7936 chr7 9856805 9857015 + 4.83 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 222640 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr4-8509 chr4 161411567 161411777 + 4.83 0.000 intron (NM_001128428, intron 14 of 14) L1PA6|LINE|L1 -611061 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr15-3039 chr15 59456185 59456395 + 4.83 0.000 intron (NM_152450, intron 1 of 8) L2c|LINE|L2 18104 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding chr16-4156 chr16 5014381 5014591 + 4.83 0.000 intron (NM_014692, intron 15 of 15) intron (NM_014692, intron 15 of 15) -19216 NR_038913 100507589 Hs.729936 NR_038913 NAGPA-AS1 - NAGPA antisense RNA 1 ncRNA chr11-9726 chr11 68389799 68390009 + 4.83 0.000 exon (NM_002335, exon 7 of 23) exon (NM_002335, exon 7 of 23) -70848 NM_001352365 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr7-8387 chr7 45058469 45058679 + 4.83 0.000 intron (NM_001029835, intron 2 of 9) L1PA4|LINE|L1 30395 NM_001146334 23148 Hs.96633 NM_001146334 ENSG00000136274 NACAD - NAC alpha domain containing protein-coding chr9-7434 chr9 24649744 24649954 + 4.83 0.000 Intergenic MER52A|LTR|ERV1 -103952 NM_001365008 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr16-5513 chr16 19971728 19971938 + 4.83 0.000 Intergenic L2b|LINE|L2 -86199 NM_001304771 51704 Hs.148685 NM_016235 ENSG00000167191 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor class C group 5 member B protein-coding chr12-5132 chr12 98786612 98786822 + 4.83 0.000 intron (NM_001352221, intron 5 of 9) intron (NM_001352221, intron 5 of 9) 108057 NM_001352225 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr12-7620 chr12 79619522 79619732 + 4.83 0.000 intron (NM_001354732, intron 3 of 6) intron (NM_001354732, intron 3 of 6) 70953 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr17-4771 chr17 44466445 44466655 + 4.83 0.000 intron (NM_001304939, intron 1 of 6) intron (NM_001304939, intron 1 of 6) -29699 NM_001304943 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr19-6523 chr19 18729755 18729965 + 4.83 0.000 intron (NM_015321, intron 1 of 13) intron (NM_015321, intron 1 of 13) 46180 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr7-8840 chr7 86972620 86972830 + 4.83 0.000 intron (NM_001142749, intron 1 of 21) intron (NM_001142749, intron 1 of 21) -6826 NM_152748 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr12-6878 chr12 20437897 20438107 + 4.83 0.000 intron (NM_000921, intron 1 of 15) intron (NM_000921, intron 1 of 15) 68757 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr6-8512 chr6 159026870 159027080 + 4.83 0.000 Intergenic FLAM_C|SINE|Alu 15378 NM_001278733 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chr2-4622 chr2 152228284 152228494 + 4.83 0.000 Intergenic L3b|LINE|CR1 -52626 NM_005843 10254 Hs.17200 NM_005843 ENSG00000115145 STAM2 Hbp|STAM2A|STAM2B signal transducing adaptor molecule 2 protein-coding chr9-3085 chr9 21259337 21259547 + 4.83 0.000 Intergenic HUERS-P1-int|LTR|ERV1 19121 NR_036676 3453 Hs.545842 NR_036676 IFNA22P IFNAP22 interferon alpha 22, pseudogene pseudo chrX-4051 chrX 18794194 18794404 + 4.83 0.000 intron (NM_152226, intron 13 of 17) L1MB8|LINE|L1 -95997 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr3-9892 chr3 83058241 83058451 + 4.83 0.000 Intergenic MER1B|DNA|hAT-Charlie 1072204 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr3-9571 chr3 54193199 54193409 + 4.83 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 70752 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr19-4788 chr19 33758414 33758624 + 4.83 0.000 intron (NM_001127895, intron 3 of 4) intron (NM_001127895, intron 3 of 4) -38351 NM_024076 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr8-4538 chr8 123591191 123591401 + 4.83 0.000 Intergenic Intergenic -50090 NM_058229 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr15-4520 chr15 53634476 53634686 + 4.83 0.000 intron (NM_182758, intron 14 of 19) MER30|DNA|hAT-Charlie -93478 NR_102335 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr2-13583 chr2 156876366 156876576 + 4.83 0.000 Intergenic Intergenic -381234 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr12-5858 chr12 49306173 49306383 + 4.83 0.000 intron (NR_120449, intron 2 of 7) MLT1-int|LTR|ERVL-MaLR 11131 NM_006262 5630 Hs.37044 NM_006262 ENSG00000135406 PRPH NEF4|PRPH1 peripherin protein-coding chr1-11494 chr1 117429774 117429984 + 4.83 0.000 intron (NM_006699, intron 5 of 12) SVA_F|Retroposon|SVA 62430 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr2-10148 chr2 76389597 76389807 + 4.83 0.000 Intergenic AluY|SINE|Alu -596263 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr12-4599 chr12 34260721 34260931 + 4.83 0.000 Intergenic Intergenic 238330 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr14-3638 chr14 71488026 71488236 + 4.83 0.000 non-coding (NR_027046, exon 1 of 1) non-coding (NR_027046, exon 1 of 1) 270 NR_027046 145474 Hs.658241 NR_027046 LOC145474 - uncharacterized LOC145474 ncRNA chr2-10266 chr2 122649028 122649238 + 4.83 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 424348 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr5-6533 chr5 8475152 8475362 + 4.83 0.000 Intergenic MER52-int|LTR|ERV1 14332 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA chr7-7088 chr7 156968256 156968466 + 4.83 0.000 intron (NM_001353366, intron 9 of 10) CpG 18649 NM_001353366 64434 Hs.15825 NM_138400 ENSG00000146909 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding chr11-7971 chr11 8554896 8555106 + 4.83 0.000 intron (NM_030906, intron 1 of 13) L1MA8|LINE|L1 38975 NM_001289061 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr3-10572 chr3 141576117 141576327 + 4.83 0.000 intron (NM_006506, intron 14 of 23) intron (NM_006506, intron 14 of 23) -86977 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr21-1619 chr21 20105980 20106190 + 4.83 0.000 Intergenic Intergenic 152600 NR_151724 111216285 Hs.561034 NR_151724 LINC02573 - long intergenic non-protein coding RNA 2573 ncRNA chr2-13963 chr2 187890289 187890499 + 4.83 0.000 Intergenic LTR43|LTR|ERV1 -335889 NM_001318941 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr21-1279 chr21 33084334 33084544 + 4.83 0.000 Intergenic Intergenic 14298 NM_138983 116448 Hs.56663 NM_138983 ENSG00000184221 OLIG1 BHLHB6|BHLHE21 oligodendrocyte transcription factor 1 protein-coding chr12-4272 chr12 120575010 120575220 + 4.83 0.000 intron (NM_014868, intron 14 of 16) AluSq2|SINE|Alu 6283 NM_198202 51367 Hs.279913 NM_015918 ENSG00000167272 POP5 HSPC004|RPP2|RPP20|hPop5 POP5 homolog, ribonuclease P/MRP subunit protein-coding chr14-3934 chr14 104304465 104304675 + 4.83 0.000 Intergenic MER92B|LTR|ERV1 80986 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr2-6305 chr2 65405791 65406001 + 4.83 0.000 intron (NM_181784, intron 1 of 5) intron (NM_181784, intron 1 of 5) 26703 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding KI270442.1-11 KI270442.1 240391 240601 + 4.83 0.000 NA NA NA NA chr1-11425 chr1 63349364 63349574 + 4.83 0.000 Intergenic Intergenic -18158 NM_013339 29929 Hs.258501 NM_013339 ENSG00000088035 ALG6 CDG1C ALG6 alpha-1,3-glucosyltransferase protein-coding chr3-7960 chr3 168201494 168201704 + 4.83 0.000 Intergenic SATR1|Satellite|Satellite -47923 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr1-15429 chr1 153141146 153141356 + 4.83 0.000 intron (NR_003062, intron 1 of 1) intron (NR_003062, intron 1 of 1) 242 NR_003062 6702 Hs.2421 NR_003062 SPRR2C - small proline rich protein 2C (pseudogene) pseudo chr3-7436 chr3 123157743 123157953 + 4.83 0.000 intron (NM_006810, intron 15 of 16) intron (NM_006810, intron 15 of 16) -3946 NR_106960 102465667 NR_106960 ENSG00000284421 MIR7110 hsa-mir-7110 microRNA 7110 ncRNA chr6-7696 chr6 86642762 86642972 + 4.83 0.000 Intergenic AluJb|SINE|Alu -294661 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr21-856 chr21 32535532 32535742 + 4.83 0.000 Intergenic AluJb|SINE|Alu 49886 NM_144659 140290 Hs.728804 NM_018277 ENSG00000242220 TCP10L C21orf77|PRED77|TCP10A-1|TCP10A-2 t-complex 10 like protein-coding chr10-6775 chr10 1275073 1275283 + 4.83 0.000 intron (NM_018702, intron 3 of 9) intron (NM_018702, intron 3 of 9) 115410 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr1-15671 chr1 166236810 166237020 + 4.83 0.000 Intergenic L1M2a1|LINE|L1 -70160 NR_135199 149297 Hs.22930 NM_001017961 ENSG00000188859 FAM78B - family with sequence similarity 78 member B protein-coding chr2-12038 chr2 29722089 29722299 + 4.83 0.000 intron (NM_004304, intron 1 of 28) intron (NM_004304, intron 1 of 28) 199392 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr10-6414 chr10 12589024 12589234 + 4.83 0.000 intron (NM_001351032, intron 4 of 11) AluJb|SINE|Alu 10376 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 - microRNA 4480 ncRNA chr21-803 chr21 46411849 46412059 + 4.83 0.000 exon (NM_006031, exon 28 of 47) exon (NM_006031, exon 28 of 47) -46937 NM_015151 23181 Hs.189585 NM_015151 ENSG00000160305 DIP2A C21orf106|DIP2 disco interacting protein 2 homolog A protein-coding chr1-5422 chr1 27854347 27854557 + 4.83 0.000 Intergenic SVA_F|Retroposon|SVA -18091 NM_004848 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1|ICB1 thymocyte selection associated family member 2 protein-coding chr5-7218 chr5 8659294 8659504 + 4.83 0.000 Intergenic Intergenic -180333 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr12-6486 chr12 103719055 103719265 + 4.83 0.000 intron (NM_017564, intron 44 of 68) intron (NM_017564, intron 44 of 68) 122074 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr20-2604 chr20 39056057 39056267 + 4.83 0.000 Intergenic Intergenic 93818 NR_033905 60625 Hs.444520 NM_021931 ENSG00000101452 DHX35 C20orf15|DDX35|KAIA0875 DEAH-box helicase 35 protein-coding chr6-6659 chr6 159819966 159820176 + 4.83 0.000 intron (NM_173516, intron 18 of 18) intron (NM_173516, intron 18 of 18) 19795 NM_001271862 154197 Hs.349077 NM_173516 ENSG00000146453 PNLDC1 HsPNLDC1 PARN like, ribonuclease domain containing 1 protein-coding chr7-8582 chr7 66197842 66198052 + 4.83 0.000 Intergenic AluJr|SINE|Alu -7387 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr16-5839 chr16 944478 944688 + 4.83 0.000 intron (NM_001352017, intron 2 of 11) intron (NM_001352017, intron 2 of 11) 23550 NR_110945 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr15-3747 chr15 60541296 60541506 + 4.83 0.000 intron (NM_134261, intron 2 of 10) intron (NM_134261, intron 2 of 10) 51125 NM_134262 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr18-2358 chr18 47794252 47794462 + 4.83 0.000 Intergenic Intergenic 136302 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chrX-3348 chrX 134133845 134134055 + 4.83 0.000 Intergenic Intergenic 35502 NR_029852 574031 NR_029852 ENSG00000284499 MIR363 MIR-363|MIRN363|hsa-mir-363 microRNA 363 ncRNA chr14-5178 chr14 92363060 92363270 + 4.83 0.000 intron (NM_153647, intron 3 of 17) intron (NM_153647, intron 3 of 17) 39357 NM_153646 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr12-8089 chr12 117776964 117777174 + 4.83 0.000 intron (NM_173598, intron 3 of 19) Tigger17|DNA|TcMar-Tigger 191921 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr3-4982 chr3 15775243 15775453 + 4.83 0.000 intron (NM_001349280, intron 2 of 26) MER21B|LTR|ERVL -18801 NM_001195099 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr18-3027 chr18 26720195 26720405 + 4.83 0.000 Intergenic Intergenic -16662 NR_024259 728606 Hs.170599 NR_024259 ENSG00000265369 PCAT18 LINC01092 prostate cancer associated transcript 18 ncRNA chr14-4053 chr14 57087949 57088159 + 4.83 0.000 Intergenic Intergenic 180851 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding chr11-8164 chr11 61532117 61532327 + 4.83 0.000 intron (NM_001370211, intron 4 of 7) MIR3|SINE|MIR 10654 NM_001370210 9066 Hs.131188 NM_004200 ENSG00000011347 SYT7 IPCA-7|IPCA7|PCANAP7|SYT-VII|SYTVII synaptotagmin 7 protein-coding chr4-7364 chr4 59591123 59591333 + 4.83 0.000 Intergenic L1P1|LINE|L1 577655 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr3-9438 chr3 49119593 49119803 + 4.83 0.000 intron (NM_001199161, intron 1 of 26) intron (NM_001199161, intron 1 of 26) 1240 NM_001351102 10869 Hs.255596 NM_006677 ENSG00000172046 USP19 ZMYND9 ubiquitin specific peptidase 19 protein-coding chr13-4035 chr13 73303826 73304036 + 4.83 0.000 Intergenic Intergenic 244926 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr11-8854 chr11 13160659 13160869 + 4.83 0.000 Intergenic Intergenic -115888 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr22-3275 chr22 46726494 46726704 + 4.83 0.000 intron (NM_022766, intron 1 of 12) intron (NM_022766, intron 1 of 12) 11653 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr2-9850 chr2 174201020 174201230 + 4.83 0.000 intron (NM_001011708, intron 3 of 9) intron (NM_001011708, intron 3 of 9) 47407 NM_001011708 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr5-6281 chr5 108683786 108683996 + 4.83 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 44370 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr4-6062 chr4 6900448 6900658 + 4.83 0.000 Intergenic (AGGCTGG)n|Simple_repeat|Simple_repeat -8891 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr14-4760 chr14 62584827 62585037 + 4.83 0.000 Intergenic AluY|SINE|Alu -444959 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr2-10904 chr2 70691518 70691728 + 4.83 0.000 intron (NM_017482, intron 7 of 12) intron (NM_017482, intron 7 of 12) 76092 NM_001185054 119 Hs.66187 NM_001617 ENSG00000075340 ADD2 ADDB adducin 2 protein-coding chr10-7769 chr10 34467822 34468032 + 4.83 0.000 intron (NM_001184789, intron 4 of 22) LTR67B|LTR|ERVL 347369 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr11-10738 chr11 132546470 132546680 + 4.83 0.000 intron (NM_002545, intron 2 of 6) intron (NM_002545, intron 2 of 6) 262273 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr3-7951 chr3 159962159 159962369 + 4.83 0.000 intron (NR_108088, intron 9 of 9) AluJr4|SINE|Alu -26571 NM_000882 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr11-6453 chr11 66756030 66756240 + 4.83 0.000 intron (NM_024650, intron 2 of 16) intron (NM_024650, intron 2 of 16) 11366 NM_001302084 79703 Hs.292088 NM_024650 ENSG00000173715 C11orf80 HYDM4|TOP6BL|TOPOVIBL chromosome 11 open reading frame 80 protein-coding chr20-4170 chr20 44626256 44626466 + 4.83 0.000 intron (NR_136160, intron 4 of 10) intron (NR_136160, intron 4 of 10) 25338 NM_000022 100 Hs.654536 NM_000022 ENSG00000196839 ADA - adenosine deaminase protein-coding chr4-5424 chr4 10204496 10204706 + 4.83 0.000 Intergenic Intergenic -87802 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr15-4098 chr15 75335866 75336076 + 4.83 0.000 promoter-TSS (NM_017828) promoter-TSS (NM_017828) -92 NM_001321847 54939 Hs.351327 NM_017828 ENSG00000140365 COMMD4 - COMM domain containing 4 protein-coding chr10-9237 chr10 133214391 133214601 + 4.83 0.000 intron (NM_152643, intron 26 of 29) intron (NM_152643, intron 26 of 29) -15721 NM_003577 8433 Hs.458406 NM_003577 ENSG00000171794 UTF1 - undifferentiated embryonic cell transcription factor 1 protein-coding chr9-6376 chr9 25783024 25783234 + 4.83 0.000 intron (NR_121604, intron 2 of 5) intron (NR_121604, intron 2 of 5) 3073 NR_121604 101929582 Hs.140547 NR_121604 ENSG00000236306 LINC01241 - long intergenic non-protein coding RNA 1241 ncRNA chr13-3741 chr13 41773369 41773579 + 4.83 0.000 intron (NM_001009814, intron 20 of 25) intron (NM_001009814, intron 20 of 25) 187611 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr4-5541 chr4 123398039 123398249 + 4.83 0.000 promoter-TSS (NM_001258039) promoter-TSS (NM_001258039) -242 NM_001258039 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr11-10338 chr11 110174328 110174538 + 4.83 0.000 TTS (NM_001260493) TTS (NM_001260493) 81041 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr8-7189 chr8 124660315 124660525 + 4.83 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 68053 NM_001363299 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr1-7688 chr1 21289850 21290060 + 4.83 0.000 intron (NM_001113348, intron 2 of 18) CpG 260 NM_001113349 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr2-14264 chr2 214799729 214799939 + 4.83 0.000 intron (NM_001282545, intron 1 of 6) L2|LINE|L2 9849 NM_001282543 580 Hs.591642 NM_000465 ENSG00000138376 BARD1 - BRCA1 associated RING domain 1 protein-coding chr10-6090 chr10 132098887 132099097 + 4.83 0.000 intron (NM_001323086, intron 1 of 23) intron (NM_001323086, intron 1 of 23) 33046 NM_001323087 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr2-11586 chr2 1848645 1848855 + 4.83 0.000 intron (NM_015025, intron 19 of 24) intron (NM_015025, intron 19 of 24) -104235 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr20-4242 chr20 48491123 48491333 + 4.83 0.000 Intergenic Intergenic 131317 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr9-7321 chr9 12174777 12174987 + 4.83 0.000 Intergenic MER66-int|LTR|ERV1 -518503 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr17-8248 chr17 66332500 66332710 + 4.83 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 29992 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr13-4338 chr13 102297780 102297990 + 4.83 0.000 intron (NM_001321941, intron 1 of 5) intron (NM_001321941, intron 1 of 5) 12801 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr20-889 chr20 33902350 33902560 + 4.83 0.000 Intergenic (TTTC)n|Simple_repeat|Simple_repeat 91107 NM_176812 128866 Hs.472471 NM_176812 ENSG00000101421 CHMP4B C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4 charged multivesicular body protein 4B protein-coding chr8-2954 chr8 48010598 48010808 + 4.83 0.000 intron (NM_003350, intron 1 of 3) AluSx|SINE|Alu 2272 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr1-16059 chr1 202029212 202029422 + 4.83 0.000 Intergenic L2c|LINE|L2 18730 NM_001114309 1999 Hs.603657 NM_004433 ENSG00000163435 ELF3 EPR-1|ERT|ESE-1|ESX E74 like ETS transcription factor 3 protein-coding chr2-11124 chr2 134682714 134682924 + 4.83 0.000 intron (NM_030923, intron 2 of 7) L1MC1|LINE|L1 36181 NM_030923 81615 Hs.369471 NM_030923 ENSG00000152128 TMEM163 DC29|SV31 transmembrane protein 163 protein-coding chr10-6456 chr10 30389105 30389315 + 4.83 0.000 Intergenic HAL1|LINE|L1 -17303 NR_120609 729668 Hs.652158 NR_003524 GOLGA2P6 - GOLGA2 pseudogene 6 pseudo chrX-5223 chrX 136017963 136018173 + 4.83 0.000 intron (NM_006359, intron 10 of 15) MLT1F|LTR|ERVL-MaLR 32633 NM_001330652 10479 Hs.62185 NM_006359 ENSG00000198689 SLC9A6 MRSA|NHE6 solute carrier family 9 member A6 protein-coding chr7-7211 chr7 19820872 19821082 + 4.83 0.000 Intergenic AluSp|SINE|Alu -47360 NM_001366626 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding chr21-1449 chr21 31235210 31235420 + 4.83 0.000 intron (NM_001353686, intron 6 of 27) HAL1|LINE|L1 -74375 NM_001353685 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr5-8575 chr5 137350275 137350485 + 4.83 0.000 intron (NM_004598, intron 2 of 10) MLT1H1|LTR|ERVL-MaLR 148946 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr6-7545 chr6 70520668 70520878 + 4.83 0.000 intron (NM_020819, intron 11 of 20) intron (NM_020819, intron 11 of 20) -46157 NM_145267 135154 Hs.418495 NM_145267 ENSG00000154079 SDHAF4 C6orf57|Sdh8 succinate dehydrogenase complex assembly factor 4 protein-coding chr11-8159 chr11 60966476 60966686 + 4.83 0.000 Intergenic Intergenic -5099 NM_006725 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr19-5052 chr19 49651352 49651562 + 4.83 0.000 exon (NM_021228, exon 7 of 11) exon (NM_021228, exon 7 of 11) 9248 NM_021228 58506 Hs.103521 NM_021228 ENSG00000126461 SCAF1 SRA1 SR-related CTD associated factor 1 protein-coding chr14-4210 chr14 95044762 95044972 + 4.83 0.000 Intergenic Intergenic 88636 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr1-16076 chr1 202644345 202644555 + 4.83 0.000 promoter-TSS (NM_001136504) promoter-TSS (NM_001136504) -997 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr11-3421 chr11 33208309 33208519 + 4.83 0.000 Intergenic Intergenic 46757 NR_034027 338739 Hs.423476 NR_034027 ENSG00000247151 CSTF3-DT CSTF3-AS1 CSTF3 divergent transcript ncRNA chr1-15750 chr1 172219821 172220031 + 4.83 0.000 intron (NR_146559, intron 15 of 20) intron (NR_146559, intron 15 of 20) -75091 NR_103486 100628315 Hs.584880 NR_038397 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA chr4-5616 chr4 2973775 2973985 + 4.83 0.000 intron (NM_001350173, intron 1 of 13) L2a|LINE|L2 10309 NM_001004057 2868 Hs.32959 NM_005307 ENSG00000125388 GRK4 GPRK2L|GPRK4|GRK4a|IT11 G protein-coupled receptor kinase 4 protein-coding chr1-16656 chr1 241411130 241411340 + 4.83 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -54005 NM_001282773 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr1-11837 chr1 33735616 33735826 + 4.83 0.000 intron (NM_052896, intron 15 of 69) intron (NM_052896, intron 15 of 69) -124754 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding chr8-4921 chr8 98803524 98803734 + 4.83 0.000 intron (NM_001256312, intron 3 of 12) Tigger10|DNA|TcMar-Tigger 22042 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr9-7472 chr9 28337959 28338169 + 4.83 0.000 intron (NM_001354574, intron 4 of 5) THE1C-int|LTR|ERVL-MaLR 381241 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr6-6586 chr6 139243640 139243850 + 4.83 0.000 intron (NM_153235, intron 9 of 9) intron (NM_153235, intron 9 of 9) 48253 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding chr6-7257 chr6 42331297 42331507 + 4.83 0.000 intron (NM_001297573, intron 3 of 17) intron (NM_001297573, intron 3 of 17) -113541 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr11-9395 chr11 57223781 57223991 + 4.83 0.000 Intergenic L2a|LINE|L2 13364 NR_027991 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr17-4231 chr17 43079791 43080001 + 4.83 0.000 intron (NM_007300, intron 12 of 23) intron (NM_007300, intron 12 of 23) 44219 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr14-3795 chr14 63362850 63363060 + 4.83 0.000 Intergenic Intergenic -44020 NM_145171 122876 Hs.375028 NM_145171 ENSG00000179600 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone subunit beta 5 protein-coding chr17-2988 chr17 69461290 69461500 + 4.83 0.000 intron (NM_002758, intron 1 of 11) intron (NM_002758, intron 1 of 11) 24137 NR_145982 105371880 NR_145982 LOC105371880 - uncharacterized LOC105371880 ncRNA chr16-5169 chr16 3627780 3627990 + 4.83 0.000 Intergenic L1M4c|LINE|L1 -16279 NM_032444 84464 Hs.143681 NM_032444 ENSG00000188827 SLX4 BTBD12|FANCP|MUS312 SLX4 structure-specific endonuclease subunit protein-coding chr16-6313 chr16 48206894 48207104 + 4.83 0.000 intron (NM_001370497, intron 12 of 29) intron (NM_001370497, intron 12 of 29) 25272 NM_033151 85320 Hs.652267 NM_032583 ENSG00000121270 ABCC11 EWWD|MRP8|WW ATP binding cassette subfamily C member 11 protein-coding chr2-6686 chr2 20309327 20309537 + 4.83 0.000 intron (NM_001352930, intron 4 of 19) intron (NM_001352930, intron 4 of 19) 17954 NM_001282790 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr11-8093 chr11 40712940 40713150 + 4.83 0.000 intron (NM_020929, intron 1 of 4) AluSx|SINE|Alu -419915 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chrX-3278 chrX 99740505 99740715 + 4.83 0.000 Intergenic Intergenic 669663 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr18-3073 chr18 32518992 32519202 + 4.83 0.000 Intergenic Intergenic 7434 NR_003558 441818 Hs.549773 NR_003558 ENSG00000260389 WBP11P1 HsT3017 WW domain binding protein 11 pseudogene 1 pseudo chr20-3317 chr20 17441782 17441992 + 4.83 0.000 intron (NM_002594, intron 8 of 11) MLT1C|LTR|ERVL-MaLR 89492 NM_001195 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chrX-2668 chrX 115561559 115561769 + 4.83 0.000 intron (NM_001282337, intron 1 of 17) CpG 490 NM_005032 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr8-4854 chr8 40304488 40304698 + 4.83 0.000 Intergenic Intergenic 38770 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr1-14303 chr1 39006204 39006414 + 4.83 0.000 TTS (NM_001136275) TTS (NM_001136275) 15033 NM_024595 79647 Hs.293563 NM_024595 ENSG00000174574 AKIRIN1 C1orf108|STRF2 akirin 1 protein-coding chrX-5218 chrX 135399776 135399986 + 4.83 0.000 Intergenic Intergenic 3452 NR_104652 100506790 Hs.161358 NR_104652 ENSG00000229015 LOC100506790 - uncharacterized LOC100506790 ncRNA chr22-3569 chr22 19224739 19224949 + 4.83 0.000 intron (NM_007098, intron 13 of 32) intron (NM_007098, intron 13 of 32) -45981 NR_046298 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CMS23|CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr18-1376 chr18 44975860 44976070 + 4.83 0.000 intron (NM_015559, intron 4 of 5) MIRc|SINE|MIR -5799 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chrX-2809 chrX 134848535 134848745 + 4.83 0.000 intron (NM_001365748, intron 7 of 7) intron (NM_001365748, intron 7 of 7) 41403 NM_001170783 159091 Hs.269127 NM_138819 ENSG00000156500 FAM122C - family with sequence similarity 122C protein-coding chr4-7254 chr4 47200567 47200777 + 4.83 0.000 intron (NM_000812, intron 4 of 8) intron (NM_000812, intron 4 of 8) 169105 NM_000812 2560 Hs.27283 NM_000812 ENSG00000163288 GABRB1 EIEE45 gamma-aminobutyric acid type A receptor beta1 subunit protein-coding chr4-5730 chr4 46603662 46603872 + 4.83 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -213639 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr3-10047 chr3 104489128 104489338 + 4.83 0.000 Intergenic L1PA7|LINE|L1 -877480 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr7-6636 chr7 127595037 127595247 + 4.83 0.000 intron (NM_020369, intron 1 of 6) intron (NM_020369, intron 1 of 6) 1406 NM_020369 29999 Hs.712692 NM_020369 ENSG00000106328 FSCN3 - fascin actin-bundling protein 3 protein-coding chr20-2167 chr20 44260875 44261085 + 4.83 0.000 intron (NM_001256740, intron 3 of 3) intron (NM_001256740, intron 3 of 3) 13672 NM_024034 78997 Hs.517059 NM_024034 ENSG00000124194 GDAP1L1 dJ881L22.1|dJ995J12.1.1 ganglioside induced differentiation associated protein 1 like 1 protein-coding chr1-15925 chr1 186358450 186358660 + 4.83 0.000 exon (NM_003292, exon 13 of 51) exon (NM_003292, exon 13 of 51) 16698 NM_003292 7175 Hs.279640 NM_003292 ENSG00000047410 TPR - translocated promoter region, nuclear basket protein protein-coding chr5-6412 chr5 151003695 151003905 + 4.83 0.000 Intergenic L2b|LINE|L2 -16791 NM_001329790 2878 Hs.386793 NM_002084 ENSG00000211445 GPX3 GPx-P|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding chr7-8026 chr7 19108962 19109172 + 4.83 0.000 Intergenic Intergenic 8569 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chrX-3257 chrX 81940200 81940410 + 4.83 0.000 Intergenic Intergenic 738203 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr12-7152 chr12 48359145 48359355 + 4.83 0.000 Intergenic Intergenic -8004 NM_001172682 121274 Hs.23492 NM_152320 ENSG00000167528 ZNF641 - zinc finger protein 641 protein-coding chr5-6027 chr5 160259780 160259990 + 4.83 0.000 intron (NM_001308173, intron 3 of 5) intron (NM_001308173, intron 3 of 5) 30379 NM_001445 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr10-6919 chr10 49318722 49318932 + 4.83 0.000 intron (NM_001135196, intron 2 of 2) intron (NM_001135196, intron 2 of 2) 19657 NM_001135196 118461 Hs.585480 NM_199459 ENSG00000177354 C10orf71 CEFIP chromosome 10 open reading frame 71 protein-coding chr13-1942 chr13 94861135 94861345 + 4.83 0.000 intron (NR_110754, intron 2 of 4) intron (NR_110754, intron 2 of 4) -98801 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr19-5477 chr19 40851507 40851717 + 4.83 0.000 Intergenic Intergenic -1165 NM_000762 1548 Hs.250615 NM_000762 ENSG00000255974 CYP2A6 CPA6|CYP2A|CYP2A3|CYPIIA6|P450C2A|P450PB cytochrome P450 family 2 subfamily A member 6 protein-coding chr9-7236 chr9 2379290 2379500 + 4.83 0.000 Intergenic Intergenic 220939 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr4-7381 chr4 61244872 61245082 + 4.83 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 42805 NM_001371342 chr2-7551 chr2 23684692 23684902 + 4.83 0.000 intron (NM_052920, intron 6 of 13) intron (NM_052920, intron 6 of 13) 242326 NM_001354107 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr20-2280 chr20 3903562 3903772 + 4.83 0.000 intron (NM_001324191, intron 2 of 7) AluSx3|SINE|Alu -13827 NR_029519 406896 NR_029519 ENSG00000199024 MIR103A2 MIR103-2|MIRN103-2|mir-103a-2 microRNA 103a-2 ncRNA chr15-3828 chr15 77461698 77461908 + 4.83 0.000 intron (NM_001304505, intron 2 of 9) intron (NM_001304505, intron 2 of 9) 40915 NM_001304504 10363 Hs.69594 NM_018200 ENSG00000140382 HMG20A HMGX1|HMGXB1 high mobility group 20A protein-coding chr22-3335 chr22 22850111 22850321 + 4.83 0.000 Intergenic Intergenic 27440 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr3-9601 chr3 56610532 56610742 + 4.83 0.000 intron (NR_148376, intron 10 of 17) L1PBa1|LINE|L1 53409 NM_015224 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chr2-12367 chr2 51920772 51920982 + 4.83 0.000 intron (NR_135237, intron 7 of 10) ERVL-E-int|LTR|ERVL -449771 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr22-3458 chr22 42559121 42559331 + 4.83 0.000 intron (NR_104301, intron 7 of 10) AluJo|SINE|Alu 5270 NM_014509 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr4-8255 chr4 139823267 139823477 + 4.83 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 157553 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chrX-4119 chrX 26027341 26027551 + 4.83 0.000 Intergenic Intergenic -110897 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr20-3314 chr20 17132064 17132274 + 4.83 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -93938 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr12-4184 chr12 93514709 93514919 + 4.83 0.000 non-coding (NR_038159, exon 7 of 7) non-coding (NR_038159, exon 7 of 7) 47300 NM_014050 28977 Hs.199579 NM_014050 ENSG00000198015 MRPL42 HSPC204|L31MT|L42MT|MRP-L31|MRP-L42|MRP-S32|MRPL31|MRPS32|PTD007|RPML31|S32MT mitochondrial ribosomal protein L42 protein-coding chr14-5064 chr14 83172333 83172543 + 4.83 0.000 Intergenic MER57A-int|LTR|ERV1 529806 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr4-5575 chr4 164282138 164282348 + 4.83 0.000 intron (NM_001166373, intron 1 of 7) intron (NM_001166373, intron 1 of 7) -84532 NM_012403 23520 Hs.661161 NM_012403 ANP32C PP32R1 acidic nuclear phosphoprotein 32 family member C protein-coding chr5-5625 chr5 154599696 154599906 + 4.83 0.000 Intergenic AluJo|SINE|Alu -3729 NR_036094 100422950 NR_036094 ENSG00000264760 MIR3141 mir-3141 microRNA 3141 ncRNA chr11-10612 chr11 124695417 124695627 + 4.83 0.000 TTS (NM_017425) TTS (NM_017425) -19219 NM_001199922 54414 Hs.10056 NM_018978 ENSG00000110013 SIAE AIS6|CSE-C|CSEC|LSE|YSG2 sialic acid acetylesterase protein-coding chr13-4197 chr13 91235324 91235534 + 4.83 0.000 Intergenic Intergenic -23731 NR_047004 100874150 Hs.711947 NR_047004 LINC00379 - long intergenic non-protein coding RNA 379 ncRNA chr4-3468 chr4 114383319 114383529 + 4.83 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -214978 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr1-13943 chr1 24068221 24068431 + 4.83 0.000 exon (NM_152372, exon 26 of 37) exon (NM_152372, exon 26 of 37) 43809 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr3-9771 chr3 70561535 70561745 + 4.83 0.000 Intergenic L1PB4|LINE|L1 -249002 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr18-1485 chr18 63677732 63677942 + 4.83 0.000 Intergenic L2|LINE|L2 -15944 NM_006919 6317 Hs.227948 NM_006919 ENSG00000057149 SERPINB3 HsT1196|SCC|SCCA-1|SCCA-PD|SCCA1|SSCA1|T4-A serpin family B member 3 protein-coding chr3-4665 chr3 41065372 41065582 + 4.83 0.000 Intergenic LTR16A1|LTR|ERVL -134028 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr20-3623 chr20 7258149 7258359 + 4.83 0.000 Intergenic Intergenic -4052 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA chr1-12961 chr1 153575384 153575594 + 4.83 0.000 Intergenic SVA_C|Retroposon|SVA -9645 NM_005978 6273 Hs.516484 NM_005978 ENSG00000196754 S100A2 CAN19|S100L S100 calcium binding protein A2 protein-coding chr1-15844 chr1 180931647 180931857 + 4.83 0.000 intron (NM_020950, intron 4 of 8) intron (NM_020950, intron 4 of 8) 18855 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr1-14675 chr1 60961387 60961597 + 4.83 0.000 intron (NR_110618, intron 2 of 3) intron (NR_110618, intron 2 of 3) 9284 NR_110617 100996570 Hs.46616 NR_110617 ENSG00000237928 NFIA-AS2 - NFIA antisense RNA 2 ncRNA chr2-6748 chr2 37671731 37671941 + 4.83 0.000 5' UTR (NM_006449, exon 1 of 2) 5' UTR (NM_006449, exon 1 of 2) 363 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr7-4218 chr7 151330002 151330212 + 4.83 0.000 Intergenic AluSz|SINE|Alu -11654 NM_016118 51667 Hs.647082 NM_016118 ENSG00000013374 NUB1 BS4|NUB1L|NYREN18 negative regulator of ubiquitin like proteins 1 protein-coding chr19-7027 chr19 50073621 50073831 + 4.83 0.000 intron (NR_138096, intron 3 of 4) intron (NR_138096, intron 3 of 4) 18883 NR_024228 100169958 Hs.723094 NR_024228 SNAR-A8 - small NF90 (ILF3) associated RNA A8 snRNA chr5-5888 chr5 17314272 17314482 + 4.83 0.000 Intergenic AluSc|SINE|Alu 72933 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LINC02111 - long intergenic non-protein coding RNA 2111 ncRNA chr8-4554 chr8 125417935 125418145 + 4.83 0.000 Intergenic Intergenic -12318 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr2-9959 chr2 5688468 5688678 + 4.83 0.000 intron (NR_110580, intron 1 of 4) MER112|DNA|hAT-Charlie 2545 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr3-7646 chr3 31507520 31507730 + 4.83 0.000 Intergenic Intergenic -25300 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr10-7397 chr10 3534445 3534655 + 4.83 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) -31712 NR_155744 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr5-7443 chr5 31375518 31375728 + 4.83 0.000 Intergenic AluY|SINE|Alu 156470 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr2-8427 chr2 119155549 119155759 + 4.83 0.000 TTS (NM_182528) TTS (NM_182528) 3097 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr8-6994 chr8 108432895 108433105 + 4.83 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -10583 NM_001329494 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr17-8406 chr17 75673949 75674159 + 4.83 0.000 intron (NR_126037, intron 3 of 8) intron (NR_126037, intron 3 of 8) 6716 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr8-3977 chr8 52291059 52291269 + 4.83 0.000 intron (NR_148195, intron 2 of 3) intron (NR_148195, intron 2 of 3) -36672 NM_001352845 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr6-6220 chr6 17796370 17796580 + 4.83 0.000 intron (NM_001105567, intron 23 of 36) AluSg|SINE|Alu 89432 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr11-9061 chr11 29557074 29557284 + 4.83 0.000 Intergenic Intergenic -37234 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr2-11084 chr2 124241425 124241635 + 4.83 0.000 intron (NM_130773, intron 2 of 23) intron (NM_130773, intron 2 of 23) 216243 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr16-6553 chr16 64964389 64964599 + 4.83 0.000 intron (NM_001330576, intron 10 of 11) Tigger3c|DNA|TcMar-Tigger 157569 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-8005 chr1 216698352 216698562 + 4.83 0.000 intron (NM_001134285, intron 3 of 8) AluY|SINE|Alu 24972 NM_001243515 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr12-6444 chr12 90208198 90208408 + 4.83 0.000 Intergenic THE1C|LTR|ERVL-MaLR -85015 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr5-3203 chr5 80881427 80881637 + 4.83 0.000 Intergenic L1MC1|LINE|L1 -78831 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding chr14-4610 chr14 52427424 52427634 + 4.83 0.000 Intergenic L2a|LINE|L2 113217 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chr17-7611 chr17 27448480 27448690 + 4.83 0.000 Intergenic AluSz|SINE|Alu -7863 NM_001367810 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr3-10987 chr3 178834879 178835089 + 4.83 0.000 intron (NM_181361, intron 4 of 4) intron (NM_181361, intron 4 of 4) 25421 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr2-5455 chr2 125348589 125348799 + 4.83 0.000 Intergenic Intergenic 769291 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr8-6881 chr8 100892080 100892290 + 4.83 0.000 Intergenic SVA_D|Retroposon|SVA 58386 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr12-7987 chr12 111336146 111336356 + 4.83 0.000 intron (NM_015267, intron 19 of 21) intron (NM_015267, intron 19 of 21) 32109 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr10-9185 chr10 131506943 131507153 + 4.83 0.000 Intergenic L1PA4|LINE|L1 -195327 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr11-10133 chr11 88986501 88986711 + 4.83 0.000 intron (NM_001143831, intron 1 of 8) L1M3|LINE|L1 61466 NM_001143831 2915 Hs.147361 NM_000842 ENSG00000168959 GRM5 GPRC1E|MGLUR5|PPP1R86|mGlu5 glutamate metabotropic receptor 5 protein-coding chr6-3066 chr6 73416831 73417041 + 4.83 0.000 intron (NM_018665, intron 16 of 16) AluSz6|SINE|Alu 22108 NM_018665 55510 Hs.125507 NM_018665 ENSG00000080007 DDX43 CT13|HAGE DEAD-box helicase 43 protein-coding chr2-13256 chr2 127015645 127015855 + 4.83 0.000 Intergenic LTR16E1|LTR|ERVL 66315 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr18-1749 chr18 7601276 7601486 + 4.83 0.000 intron (NM_002845, intron 1 of 30) MLT1D|LTR|ERVL-MaLR 34065 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr7-7827 chr7 3966186 3966396 + 4.83 0.000 intron (NM_152744, intron 9 of 44) intron (NM_152744, intron 9 of 44) -163394 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr11-5724 chr11 2288157 2288367 + 4.83 0.000 Intergenic L1MEc|LINE|L1 13656 NM_001142946 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr6-2045 chr6 78333443 78333653 + 4.83 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 205761 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr12-6568 chr12 121238967 121239177 + 4.83 0.000 3' UTR (NM_001270485, exon 17 of 17) 3' UTR (NM_001270485, exon 17 of 17) 28943 NM_002560 5025 Hs.321709 NM_002560 ENSG00000135124 P2RX4 P2X4|P2X4R purinergic receptor P2X 4 protein-coding chr19-7087 chr19 56054785 56054995 + 4.83 0.000 intron (NM_153447, intron 13 of 14) intron (NM_153447, intron 13 of 14) -11794 NR_110741 101928886 Hs.434652 NR_110741 ENSG00000267522 LINC01864 - long intergenic non-protein coding RNA 1864 ncRNA chr4-8694 chr4 181427342 181427552 + 4.83 0.000 Intergenic L2c|LINE|L2 -162418 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr4-2250 chr4 161211106 161211316 + 4.83 0.000 Intergenic AluYc|SINE|Alu -811522 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr11-8281 chr11 71261919 71262129 + 4.83 0.000 Intergenic L1ME1|LINE|L1 -37228 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr9-6406 chr9 36560915 36561125 + 4.83 0.000 Intergenic MER41B|LTR|ERV1 -11842 NM_001256691 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr5-9204 chr5 180469515 180469725 + 4.83 0.000 Intergenic Intergenic -24759 NR_163438 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding chr5-8707 chr5 142512882 142513092 + 4.71 0.000 Intergenic L2a|LINE|L2 108347 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr9-3696 chr9 105415795 105416005 + 4.71 0.000 intron (NM_001330731, intron 15 of 15) AluSx1|SINE|Alu -32134 NM_001287191 83856 Hs.136901 NM_031919 ENSG00000106701 FSD1L CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1 fibronectin type III and SPRY domain containing 1 like protein-coding chr15-4754 chr15 69396562 69396772 + 4.71 0.000 TTS (NR_132970) TTS (NR_132970) -17682 NM_138555 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr11-10712 chr11 130986046 130986256 + 4.71 0.000 Intergenic L1PA3|LINE|L1 -69664 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr3-10113 chr3 112546437 112546647 + 4.71 0.000 intron (NM_001278712, intron 5 of 10) MER44B|DNA|TcMar-Tigger -14778 NM_001348906 55032 Hs.237480 NM_017945 ENSG00000138459 SLC35A5 - solute carrier family 35 member A5 protein-coding chr4-7534 chr4 75878677 75878887 + 4.71 0.000 intron (NM_006239, intron 10 of 16) AluSc|SINE|Alu 23670 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr6-8621 chr6 170023108 170023318 + 4.71 0.000 Intergenic CpG 60590 NR_027434 100131532 Hs.703417 NR_027434 LOC100131532 - uncharacterized LOC100131532 ncRNA chr2-8257 chr2 100104832 100105042 + 4.71 0.000 intron (NM_001025108, intron 1 of 23) CpG-16347 646 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr3-9724 chr3 67211058 67211268 + 4.71 0.000 Intergenic L2c|LINE|L2 -14301 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr16-3786 chr16 31111893 31112103 + 4.71 0.000 exon (NM_001271926, exon 10 of 10) exon (NM_001271926, exon 10 of 10) 3612 NM_001271926 10295 Hs.513520 NM_005881 ENSG00000103507 BCKDK BCKDKD|BDK branched chain keto acid dehydrogenase kinase protein-coding chr16-5582 chr16 49284893 49285103 + 4.71 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -3160 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding chr1-15029 chr1 93552891 93553101 + 4.71 0.000 3' UTR (NM_017737, exon 15 of 15) 3' UTR (NM_017737, exon 15 of 15) 32166 NM_001308251 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr3-9210 chr3 37509176 37509386 + 4.71 0.000 intron (NM_002207, intron 8 of 27) intron (NM_002207, intron 8 of 27) 57140 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr11-8899 chr11 15857318 15857528 + 4.71 0.000 Intergenic Intergenic 112198 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr2-8440 chr2 120377338 120377548 + 4.71 0.000 Intergenic Intergenic 31307 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr1-13002 chr1 159715801 159716011 + 4.71 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -1317 NM_001329058 1401 Hs.76452 NM_000567 ENSG00000132693 CRP PTX1 C-reactive protein protein-coding chr11-9790 chr11 69917814 69918024 + 4.71 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -98503 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chrX-4047 chrX 18266603 18266813 + 4.71 0.000 intron (NR_033717, intron 7 of 15) intron (NR_033717, intron 7 of 15) -45804 NM_001184767 139105 Hs.403802 NM_153346 ENSG00000177324 BEND2 CXorf20 BEN domain containing 2 protein-coding chr14-4524 chr14 39938271 39938481 + 4.71 0.000 Intergenic AluSq4|SINE|Alu -505876 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr11-8971 chr11 20948713 20948923 + 4.71 0.000 intron (NM_201551, intron 11 of 18) intron (NM_201551, intron 11 of 18) 279232 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr4-4370 chr4 40017721 40017931 + 4.71 0.000 Intergenic MIR|SINE|MIR -39024 NM_018177 55728 Hs.391463 NM_018177 ENSG00000078177 N4BP2 B3BP NEDD4 binding protein 2 protein-coding chr19-6233 chr19 6350110 6350320 + 4.71 0.000 Intergenic AluSc|SINE|Alu -11316 NM_006012 8192 Hs.515092 NM_006012 ENSG00000125656 CLPP DFNB81|PRLTS3 caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding chr11-7157 chr11 127986135 127986345 + 4.71 0.000 Intergenic L1M4|LINE|L1 -222526 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr13-4360 chr13 104643210 104643420 + 4.71 0.000 Intergenic MIR|SINE|MIR -822552 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr19-6325 chr19 10375146 10375356 + 4.71 0.000 intron (NM_003331, intron 3 of 24) intron (NM_003331, intron 3 of 24) 5321 NM_003331 7297 Hs.75516 NM_003331 ENSG00000105397 TYK2 IMD35|JTK1 tyrosine kinase 2 protein-coding chr8-7062 chr8 115727560 115727770 + 4.71 0.000 Intergenic MER5B|DNA|hAT-Charlie -58690 NM_014112 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chrX-1574 chrX 69636426 69636636 + 4.71 0.000 intron (NM_001005609, intron 1 of 7) L2c|LINE|L2 20418 NM_001005612 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr16-6000 chr16 7778692 7778902 + 4.71 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 445952 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr2-7043 chr2 158359908 158360118 + 4.71 0.000 intron (NM_138803, intron 1 of 13) L1PA7|LINE|L1 96740 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr19-5257 chr19 47632949 47633159 + 4.71 0.000 intron (NM_015711, intron 1 of 14) intron (NM_015711, intron 1 of 14) 24858 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr4-6974 chr4 21396500 21396710 + 4.71 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) 68153 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr1-15617 chr1 162009398 162009608 + 4.71 0.000 intron (NM_001347700, intron 3 of 7) intron (NM_001347700, intron 3 of 7) 14962 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr3-6864 chr3 151158643 151158853 + 4.71 0.000 exon (NM_053002, exon 6 of 43) exon (NM_053002, exon 6 of 43) 44468 NM_013308 29909 Hs.549152 NM_013308 ENSG00000174946 GPR171 H963 G protein-coupled receptor 171 protein-coding chr2-14156 chr2 203917482 203917692 + 4.71 0.000 Intergenic AluJr4|SINE|Alu -19161 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr22-3877 chr22 34586731 34586941 + 4.71 0.000 Intergenic AluSg|SINE|Alu 411080 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr8-5184 chr8 101973428 101973638 + 4.71 0.000 intron (NM_001040624, intron 3 of 7) LTR85b|LTR|Gypsy? -10899 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr4-4480 chr4 56485910 56486120 + 4.71 0.000 intron (NR_151856, intron 10 of 19) MER2|DNA|TcMar-Tigger 18398 NM_001267722 6731 Hs.237825 NM_006947 ENSG00000174780 SRP72 BMFF|BMFS1|HEL103 signal recognition particle 72 protein-coding chr11-9243 chr11 42213389 42213599 + 4.71 0.000 intron (NR_038309, intron 4 of 5) MSTB-int|LTR|ERVL-MaLR 40196 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr15-4331 chr15 40280093 40280303 + 4.71 0.000 3' UTR (NM_001190479, exon 1 of 1) 3' UTR (NM_001190479, exon 1 of 1) 2388 NM_001190479 100131244 Hs.711376 NM_001190479 ENSG00000230778 ANKRD63 - ankyrin repeat domain 63 protein-coding chr7-5505 chr7 43844371 43844581 + 4.71 0.000 Intergenic Intergenic 25041 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr11-7298 chr11 46121498 46121708 + 4.71 0.000 promoter-TSS (NM_001352032) promoter-TSS (NM_001352032) -618 NM_001352025 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr13-3831 chr13 48317101 48317311 + 4.71 0.000 intron (NM_000321, intron 2 of 26) CpG 13459 NM_000321 5925 Hs.408528 NM_000321 ENSG00000139687 RB1 OSRC|PPP1R130|RB|p105-Rb|pRb|pp110 RB transcriptional corepressor 1 protein-coding chr14-4933 chr14 74172039 74172249 + 4.71 0.000 intron (NM_001024674, intron 5 of 5) intron (NM_001024674, intron 5 of 5) -67305 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr8-6636 chr8 78002005 78002215 + 4.71 0.000 Intergenic AluSz|SINE|Alu -514230 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr22-2413 chr22 18016881 18017091 + 4.71 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) 7575 NM_015241 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr5-8392 chr5 124707392 124707602 + 4.71 0.000 intron (NM_020747, intron 1 of 8) intron (NM_020747, intron 1 of 8) 37615 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chrX-4774 chrX 96795855 96796065 + 4.71 0.000 intron (NM_007309, intron 4 of 26) intron (NM_007309, intron 4 of 26) -87948 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr4-8031 chr4 118936002 118936212 + 4.71 0.000 intron (NM_001128934, intron 1 of 4) Tigger3c|DNA|TcMar-Tigger 47253 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr17-5650 chr17 50007698 50007908 + 4.71 0.000 Intergenic AluSq2|SINE|Alu -12579 NM_005220 1747 Hs.134194 NM_005220 ENSG00000064195 DLX3 AI4|TDO distal-less homeobox 3 protein-coding chr12-7138 chr12 47889408 47889618 + 4.71 0.000 intron (NM_001364085, intron 1 of 9) intron (NM_001364085, intron 1 of 9) 15481 NM_000376 7421 Hs.524368 NM_000376 ENSG00000111424 VDR NR1I1|PPP1R163 vitamin D receptor protein-coding chr22-4076 chr22 42791019 42791229 + 4.71 0.000 Intergenic Intergenic 66149 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr3-6775 chr3 142662904 142663114 + 4.71 0.000 intron (NM_001172312, intron 1 of 15) AluSz|SINE|Alu 6112 NM_001172312 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr11-7779 chr11 91014578 91014788 + 4.71 0.000 Intergenic L1ME1|LINE|L1 -145481 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr5-7595 chr5 42995007 42995217 + 4.71 0.000 Intergenic CpG -1779 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr7-8602 chr7 66983899 66984109 + 4.71 0.000 Intergenic AluSz|SINE|Alu 11582 NM_016038 51119 Hs.110445 NM_016038 ENSG00000126524 SBDS CGI-97|SDS|SWDS SBDS ribosome maturation factor protein-coding chr7-8619 chr7 69052715 69052925 + 4.71 0.000 Intergenic Intergenic 544804 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr8-5812 chr8 3203845 3204055 + 4.71 0.000 intron (NM_033225, intron 31 of 69) L2c|LINE|L2 -475499 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr19-5373 chr19 8254526 8254736 + 4.71 0.000 intron (NM_024552, intron 4 of 11) intron (NM_024552, intron 4 of 11) 45261 NM_024552 79603 Hs.515111 NM_024552 ENSG00000090661 CERS4 LASS4|Trh1 ceramide synthase 4 protein-coding chr11-7432 chr11 116269751 116269961 + 4.71 0.000 Intergenic Intergenic -369566 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr9-8437 chr9 121945191 121945401 + 4.71 0.000 intron (NM_001139442, intron 6 of 8) intron (NM_001139442, intron 6 of 8) 148310 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr1-13473 chr1 3580620 3580830 + 4.71 0.000 intron (NM_001409, intron 3 of 36) intron (NM_001409, intron 3 of 36) -19935 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr7-7082 chr7 152258124 152258334 + 4.71 0.000 intron (NM_170606, intron 9 of 58) L1MC4|LINE|L1 177774 NM_170606 58508 Hs.647120 NM_021230 ENSG00000055609 KMT2C HALR|KLEFS2|MLL3 lysine methyltransferase 2C protein-coding chr5-5253 chr5 119912594 119912804 + 4.71 0.000 Intergenic L1PB1|LINE|L1 283140 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chrX-3791 chrX 136262142 136262352 + 4.71 0.000 Intergenic Intergenic -5765 NM_001173516 79649 Hs.446275 NM_024597 ENSG00000129680 MAP7D3 MDP3 MAP7 domain containing 3 protein-coding chr1-14901 chr1 82824047 82824257 + 4.71 0.000 Intergenic Intergenic -79031 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr11-6119 chr11 38146841 38147051 + 4.71 0.000 Intergenic L1PA16|LINE|L1 208345 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr1-12009 chr1 96074534 96074744 + 4.71 0.000 Intergenic Intergenic 82571 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr11-9119 chr11 33160596 33160806 + 4.71 0.000 promoter-TSS (NR_034027) promoter-TSS (NR_034027) 779 NM_001326 1479 Hs.44402 NM_001326 ENSG00000176102 CSTF3 CSTF-77 cleavage stimulation factor subunit 3 protein-coding chr3-8920 chr3 13121604 13121814 + 4.71 0.000 Intergenic Intergenic -48280 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr7-5123 chr7 4905799 4906009 + 4.71 0.000 TTS (NM_001100600) TTS (NM_001100600) -22188 NM_018059 55698 Hs.667336 NM_018059 ENSG00000157927 RADIL RASIP2 Rap associating with DIL domain protein-coding chr7-9493 chr7 137003717 137003927 + 4.71 0.000 intron (NM_001006630, intron 3 of 3) THE1C|LTR|ERVL-MaLR 100655 NR_030165 574443 NR_030165 ENSG00000207597 MIR490 MIRN490|hsa-mir-490|miR-490 microRNA 490 ncRNA chr12-7235 chr12 51381299 51381509 + 4.71 0.000 intron (NM_007210, intron 2 of 11) intron (NM_007210, intron 2 of 11) -9913 NM_001258401 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr16-6135 chr16 19987103 19987313 + 4.71 0.000 Intergenic Intergenic 86570 NM_001002911 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr3-4940 chr3 6478590 6478800 + 4.71 0.000 Intergenic AluJb|SINE|Alu 326754 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr10-8338 chr10 79352596 79352806 + 4.71 0.000 intron (NM_005729, intron 5 of 5) intron (NM_005729, intron 5 of 5) 5232 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr6-8292 chr6 143059692 143059902 + 4.71 0.000 promoter-TSS (NM_001366345) promoter-TSS (NM_001366345) 434 NM_001286587 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr11-6502 chr11 68677318 68677528 + 4.71 0.000 Intergenic Intergenic -7121 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr11-8091 chr11 38995962 38996172 + 4.71 0.000 Intergenic L1M4|LINE|L1 347209 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr16-6281 chr16 31414207 31414417 + 4.71 0.000 intron (NM_001318185, intron 16 of 29) L2b|LINE|L2 14048 NM_005205 1339 Hs.250760 NM_005205 ENSG00000156885 COX6A2 COX6AH|COXVIAH cytochrome c oxidase subunit 6A2 protein-coding chr17-6694 chr17 78697197 78697407 + 4.71 0.000 intron (NM_004762, intron 9 of 12) intron (NM_004762, intron 9 of 12) 19730 NM_001292019 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr11-10571 chr11 122393707 122393917 + 4.71 0.000 intron (NR_137179, intron 1 of 4) L1MC5a|LINE|L1 -25824 NR_137192 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr2-4793 chr2 39411794 39412004 + 4.71 0.000 intron (NM_003618, intron 1 of 33) intron (NM_003618, intron 1 of 33) 25386 NM_001270425 8491 Hs.655750 NM_003618 ENSG00000011566 MAP4K3 GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding chr18-2690 chr18 58975424 58975634 + 4.71 0.000 intron (NR_148459, intron 9 of 11) intron (NR_148459, intron 9 of 11) -60150 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr19-5733 chr19 17955080 17955290 + 4.71 0.000 intron (NM_002248, intron 2 of 10) FRAM|SINE|Alu 3883 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr14-5050 chr14 81438218 81438428 + 4.71 0.000 Intergenic Intergenic -1858 NM_001366850 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr1-16230 chr1 209433534 209433744 + 4.71 0.000 Intergenic Intergenic 1506 NR_029622 406988 NR_029622 ENSG00000284485 MIR205 MIRN205|mir-205 microRNA 205 ncRNA chr13-3964 chr13 62046425 62046635 + 4.71 0.000 Intergenic LTR12C|LTR|ERV1 -16982 NR_046995 100874143 Hs.552684 NR_046995 ENSG00000229578 LINC00358 - long intergenic non-protein coding RNA 358 ncRNA chr9-5668 chr9 123305449 123305659 + 4.71 0.000 Intergenic (CCTTTC)n|Simple_repeat|Simple_repeat -36968 NM_018387 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr7-4960 chr7 146103925 146104135 + 4.71 0.000 Intergenic L1MA8|LINE|L1 -670241 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr8-6618 chr8 75968453 75968663 + 4.71 0.000 Intergenic Intergenic 428590 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr2-12357 chr2 51093526 51093736 + 4.71 0.000 intron (NR_135237, intron 2 of 10) intron (NR_135237, intron 2 of 10) 61030 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr9-8438 chr9 121977573 121977783 + 4.71 0.000 intron (NM_001139442, intron 4 of 8) AluSq|SINE|Alu 115928 NM_194252 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr13-3654 chr13 32252885 32253095 + 4.71 0.000 intron (NM_023037, intron 50 of 60) intron (NM_023037, intron 50 of 60) 58964 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr10-7527 chr10 14353483 14353693 + 4.71 0.000 Intergenic Intergenic -22664 NM_018027 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr10-9152 chr10 128327217 128327427 + 4.71 0.000 Intergenic Intergenic 41372 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr1-16167 chr1 206134006 206134216 + 4.71 0.000 Intergenic Intergenic -16723 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr3-8779 chr3 4962985 4963195 + 4.71 0.000 intron (NR_125915, intron 1 of 3) AluJr|SINE|Alu -16347 NM_003670 8553 Hs.744856 NM_003670 ENSG00000134107 BHLHE40 BHLHB2|Clast5|DEC1|HLHB2|SHARP-2|SHARP2|STRA13|Stra14 basic helix-loop-helix family member e40 protein-coding chr4-7169 chr4 39843047 39843257 + 4.71 0.000 intron (NM_001100399, intron 30 of 32) AluJo|SINE|Alu 134759 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chrX-5121 chrX 129137024 129137234 + 4.71 0.000 Intergenic Intergenic 386361 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr6-6842 chr6 7939299 7939509 + 4.71 0.000 intron (NR_037616, intron 4 of 12) intron (NR_037616, intron 4 of 12) -28616 NM_030810 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr2-7180 chr2 207311418 207311628 + 4.71 0.000 Intergenic Intergenic -42099 NR_031633 100302130 NR_031633 ENSG00000221628 MIR1302-4 MIRN1302-4|hsa-mir-1302-4 microRNA 1302-4 ncRNA chr6-5127 chr6 121952155 121952365 + 4.71 0.000 Intergenic Intergenic -447291 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr1-11543 chr1 169601250 169601460 + 4.71 0.000 intron (NM_003005, intron 10 of 16) MIR3|SINE|MIR -14824 NM_000130 2153 Hs.30054 NM_000130 ENSG00000198734 F5 FVL|PCCF|RPRGL1|THPH2 coagulation factor V protein-coding chr13-3191 chr13 111556140 111556350 + 4.71 0.000 Intergenic Intergenic -39764 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr5-4564 chr5 21919561 21919771 + 4.71 0.000 intron (NM_004061, intron 6 of 14) intron (NM_004061, intron 6 of 14) -29819 NM_001364109 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr12-3298 chr12 77036657 77036867 + 4.71 0.000 intron (NM_203394, intron 7 of 12) AluY|SINE|Alu 28807 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr16-4248 chr16 21053407 21053617 + 4.71 0.000 intron (NM_001347886, intron 28 of 61) intron (NM_001347886, intron 28 of 61) 97334 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr4-8166 chr4 129806030 129806240 + 4.71 0.000 intron (NR_151713, intron 3 of 16) intron (NR_151713, intron 3 of 16) 34516 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chrX-4900 chrX 107691551 107691761 + 4.71 0.000 Intergenic L1MC1|LINE|L1 24852 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr5-4216 chr5 125954186 125954396 + 4.71 0.000 Intergenic MLT2B1|LTR|ERVL -225286 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr12-7502 chr12 67833806 67834016 + 4.71 0.000 Intergenic Intergenic -95324 NR_120456 101927922 Hs.450769 NR_120456 ENSG00000255772 LINC01479 HRAT39 long intergenic non-protein coding RNA 1479 ncRNA chr18-2321 chr18 2774892 2775102 + 4.71 0.000 intron (NM_015295, intron 41 of 47) intron (NM_015295, intron 41 of 47) -72009 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr20-4126 chr20 42433482 42433692 + 4.71 0.000 intron (NM_133170, intron 9 of 31) MER117|DNA|hAT-Charlie -251896 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr6-4607 chr6 44580975 44581185 + 4.71 0.000 Intergenic Intergenic -29199 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr1-6963 chr1 160186707 160186917 + 4.71 0.000 3' UTR (NM_144699, exon 22 of 22) 3' UTR (NM_144699, exon 22 of 22) -3763 NM_001231 844 Hs.632476 NM_001231 ENSG00000143318 CASQ1 CASQ|PDIB1|VMCQA calsequestrin 1 protein-coding chr13-3679 chr13 34630796 34631006 + 4.71 0.000 intron (NR_047036, intron 1 of 2) intron (NR_047036, intron 1 of 2) 9784 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr22-3310 chr22 18951356 18951566 + 4.71 0.000 Intergenic Intergenic -14908 NM_001368249 102724788 Hs.517352 NM_001368249 ENSG00000277196 LOC102724788 - proline dehydrogenase 1, mitochondrial protein-coding chr11-8313 chr11 74844098 74844308 + 4.71 0.000 exon (NM_182969, exon 17 of 19) exon (NM_182969, exon 17 of 19) 95354 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr20-3592 chr20 4248311 4248521 + 4.71 0.000 exon (NM_000678, exon 1 of 2) exon (NM_000678, exon 1 of 2) 871 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr5-8516 chr5 133931096 133931306 + 4.71 0.000 Intergenic L1ME4a|LINE|L1 17524 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr2-11652 chr2 6708235 6708445 + 4.71 0.000 Intergenic L1MB7|LINE|L1 -57821 NR_110497 102800314 Hs.258100 NR_110497 ENSG00000236172 MIR7515HG - MIR7515 host gene ncRNA chr3-8517 chr3 135237512 135237722 + 4.71 0.000 intron (NM_004441, intron 12 of 15) intron (NM_004441, intron 12 of 15) 442357 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr1-14909 chr1 83838283 83838493 + 4.71 0.000 intron (NR_119374, intron 2 of 2) LTR78B|LTR|ERV1 22158 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr8-7259 chr8 129427002 129427212 + 4.71 0.000 intron (NR_130920, intron 1 of 3) L1PB1|LINE|L1 57035 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA chr10-8630 chr10 98116671 98116881 + 4.71 0.000 Intergenic FLAM_A|SINE|Alu -17848 NM_001256620 27291 Hs.419800 NM_014472 ENSG00000166024 R3HCC1L C10orf28|GIDRP86|GIDRP88|PSORT R3H domain and coiled-coil containing 1 like protein-coding chr3-8362 chr3 82037712 82037922 + 4.71 0.000 intron (NR_147146, intron 1 of 8) intron (NR_147146, intron 1 of 8) 51675 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr15-3725 chr15 53195695 53195905 + 4.71 0.000 Intergenic Intergenic 79435 NR_147181 105370822 Hs.527821 NR_147181 ENSG00000259237 LINC02490 - long intergenic non-protein coding RNA 2490 ncRNA chr8-5952 chr8 20297512 20297722 + 4.71 0.000 intron (NM_021020, intron 1 of 3) AluSx3|SINE|Alu 6346 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr22-2634 chr22 33519078 33519288 + 4.71 0.000 intron (NM_133642, intron 6 of 14) intron (NM_133642, intron 6 of 14) -82514 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr11-7944 chr11 3631316 3631526 + 4.71 0.000 intron (NR_002720, intron 2 of 6) AluJr|SINE|Alu 4961 NR_002720 7221 Hs.131910 NR_002720 ENSG00000182048 TRPC2 - transient receptor potential cation channel subfamily C member 2 (pseudogene) pseudo chr8-5700 chr8 125955031 125955241 + 4.71 0.000 Intergenic L1PA8|LINE|L1 -3939 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr7-8845 chr7 87506329 87506539 + 4.71 0.000 intron (NM_001348944, intron 28 of 29) intron (NM_001348944, intron 28 of 29) -30731 NM_018850 5244 Hs.654403 NM_000443 ENSG00000005471 ABCB4 ABC21|GBD1|ICP3|MDR2|MDR2/3|MDR3|PFIC-3|PGY3 ATP binding cassette subfamily B member 4 protein-coding chr7-6615 chr7 104673861 104674071 + 4.71 0.000 intron (NM_199000, intron 1 of 2) OldhAT1|DNA|hAT-Ac 130126 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr14-4617 chr14 52888853 52889063 + 4.71 0.000 intron (NM_006832, intron 4 of 14) intron (NM_006832, intron 4 of 14) 62092 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr7-4374 chr7 73836247 73836457 + 4.71 0.000 intron (NM_152559, intron 5 of 5) SVA_F|Retroposon|SVA 5489 NM_001305 1364 Hs.647036 NM_001305 ENSG00000189143 CLDN4 CPE-R|CPER|CPETR|CPETR1|WBSCR8|hCPE-R claudin 4 protein-coding chr20-3651 chr20 9770337 9770547 + 4.71 0.000 intron (NM_177990, intron 1 of 9) L2|LINE|L2 68634 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr7-7968 chr7 13180170 13180380 + 4.71 0.000 Intergenic Intergenic 492642 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr5-7354 chr5 18116285 18116495 + 4.71 0.000 Intergenic Intergenic 309116 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr16-5214 chr16 23607188 23607398 + 4.71 0.000 intron (NM_024675, intron 12 of 12) AluJr|SINE|Alu -10977 NM_005003 4706 Hs.189716 NM_005003 ENSG00000004779 NDUFAB1 ACP|ACP1|FASN2A|SDAP NADH:ubiquinone oxidoreductase subunit AB1 protein-coding chr16-5046 chr16 62761379 62761589 + 4.71 0.000 Intergenic Intergenic -725046 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr16-6873 chr16 84137231 84137441 + 4.71 0.000 intron (NM_031463, intron 1 of 5) intron (NM_031463, intron 1 of 5) 7841 NM_031463 83693 Hs.555992 NM_031463 ENSG00000103160 HSDL1 SDR12C3 hydroxysteroid dehydrogenase like 1 protein-coding chr18-3318 chr18 55858824 55859034 + 4.71 0.000 Intergenic Intergenic 61270 NR_110755 101927273 Hs.434335 NR_110755 ENSG00000260930 LINC01416 - long intergenic non-protein coding RNA 1416 ncRNA chr9-5339 chr9 89165212 89165422 + 4.71 0.000 intron (NM_016848, intron 1 of 11) intron (NM_016848, intron 1 of 11) 13501 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr15-2611 chr15 65377897 65378107 + 4.71 0.000 promoter-TSS (NM_004884) promoter-TSS (NM_004884) 0 NM_004884 9543 Hs.128292 NM_004884 ENSG00000174498 IGDCC3 HsT18880|PUNC immunoglobulin superfamily DCC subclass member 3 protein-coding chr2-12443 chr2 58634786 58634996 + 4.71 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 114138 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr1-12598 chr1 35111208 35111418 + 4.71 0.000 intron (NM_001289089, intron 7 of 9) intron (NM_001289089, intron 7 of 9) 31928 NM_024772 79830 Hs.471243 NM_024772 ENSG00000197056 ZMYM1 MYM zinc finger MYM-type containing 1 protein-coding chr16-5602 chr16 56306243 56306453 + 4.71 0.000 intron (NM_138736, intron 3 of 7) intron (NM_138736, intron 3 of 7) 60828 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr4-6786 chr4 7225810 7226020 + 4.71 0.000 intron (NM_020777, intron 1 of 26) MLT1G|LTR|ERVL-MaLR 33377 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr7-9282 chr7 125423194 125423404 + 4.71 0.000 Intergenic L1PB1|LINE|L1 -159008 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr11-10033 chr11 82462373 82462583 + 4.71 0.000 Intergenic L2c|LINE|L2 -58565 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr2-14083 chr2 199267449 199267659 + 4.71 0.000 Intergenic MER2|DNA|TcMar-Tigger 190385 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr16-5580 chr16 48414094 48414304 + 4.71 0.000 Intergenic Intergenic -28786 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr6-5988 chr6 94933953 94934163 + 4.71 0.000 Intergenic Intergenic 643393 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr4-8181 chr4 131467972 131468182 + 4.71 0.000 Intergenic THE1A|LTR|ERVL-MaLR -296761 NR_125883 101927305 Hs.507924 NR_125883 SNHG27 - small nucleolar RNA host gene 27 ncRNA chr15-4109 chr15 77873275 77873485 + 4.71 0.000 Intergenic Intergenic -52480 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr3-10476 chr3 134381134 134381344 + 4.71 0.000 Intergenic HAL1|LINE|L1 -5822 NM_001278683 51421 Hs.426312 NM_016201 ENSG00000114019 AMOTL2 LCCP angiomotin like 2 protein-coding chr14-4761 chr14 62602107 62602317 + 4.71 0.000 Intergenic L1MA8|LINE|L1 443246 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr7-5274 chr7 22377957 22378167 + 4.71 0.000 Intergenic Intergenic -20908 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr2-13204 chr2 121902750 121902960 + 4.71 0.000 Intergenic Intergenic 147204 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr4-6940 chr4 17422589 17422799 + 4.71 0.000 Intergenic L2a|LINE|L2 89396 NM_000320 5860 Hs.75438 NM_000320 ENSG00000151552 QDPR DHPR|HDHPR|PKU2|SDR33C1 quinoid dihydropteridine reductase protein-coding chr22-3766 chr22 27993183 27993393 + 4.71 0.000 exon (NM_001145418, exon 18 of 23) exon (NM_001145418, exon 18 of 23) -72676 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr2-14309 chr2 217338517 217338727 + 4.71 0.000 intron (NR_133642, intron 5 of 5) intron (NR_133642, intron 5 of 5) 55889 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr6-5928 chr6 67909838 67910048 + 4.71 0.000 Intergenic AluSp|SINE|Alu -145408 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr2-12156 chr2 38528204 38528414 + 4.71 0.000 Intergenic Intergenic -12569 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chr6-2642 chr6 161861464 161861674 + 4.71 0.000 intron (NM_004562, intron 6 of 11) L1PA8|LINE|L1 390592 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr3-9457 chr3 49518829 49519039 + 4.71 0.000 intron (NM_001177640, intron 3 of 3) intron (NM_001177640, intron 3 of 3) 35432 NR_038866 100132677 Hs.435651 NR_038866 ENSG00000226913 BSN-DT BSN-AS2 BSN divergent transcript ncRNA chrX-5257 chrX 138556563 138556773 + 4.71 0.000 Intergenic Intergenic 111125 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr8-6345 chr8 52032878 52033088 + 4.71 0.000 Intergenic Intergenic -133797 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr20-2586 chr20 38181343 38181553 + 4.71 0.000 Intergenic Intergenic -14940 NM_001323316 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr9-7312 chr9 10572253 10572463 + 4.71 0.000 intron (NM_002839, intron 2 of 45) intron (NM_002839, intron 2 of 45) 40644 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr3-8559 chr3 151102638 151102848 + 4.71 0.000 intron (NM_053002, intron 1 of 42) AluJr|SINE|Alu 15945 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr2-10509 chr2 228975176 228975386 + 4.71 0.000 Intergenic L1PA16|LINE|L1 256811 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr1-13451 chr1 3252826 3253036 + 4.71 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 124956 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr20-2850 chr20 62346243 62346453 + 4.71 0.000 intron (NM_005560, intron 9 of 79) intron (NM_005560, intron 9 of 79) -6662 NR_109923 101928158 Hs.473256 NR_109922 ENSG00000228812 LAMA5-AS1 - LAMA5 antisense RNA 1 ncRNA chr19-6304 chr19 8609794 8610004 + 4.71 0.000 intron (NM_030957, intron 1 of 25) intron (NM_030957, intron 1 of 25) 816 NM_030957 81794 Hs.657508 NM_030957 ENSG00000142303 ADAMTS10 ADAM-TS10|ADAMTS-10|WMS|WMS1 ADAM metallopeptidase with thrombospondin type 1 motif 10 protein-coding chr18-2633 chr18 39116527 39116737 + 4.71 0.000 Intergenic Intergenic 505543 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr3-7570 chr3 1160187 1160397 + 4.71 0.000 intron (NM_001289080, intron 2 of 22) L1ME3A|LINE|L1 67268 NM_001349357 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr7-7830 chr7 4163555 4163765 + 4.71 0.000 intron (NM_001079653, intron 6 of 19) intron (NM_001079653, intron 6 of 19) -28823 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr6-7208 chr6 39625129 39625339 + 4.71 0.000 intron (NM_001289020, intron 5 of 21) intron (NM_001289020, intron 5 of 21) 100174 NM_001289020 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr1-11563 chr1 188546051 188546261 + 4.71 0.000 Intergenic AluY|SINE|Alu 1102528 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr11-6576 chr11 72180856 72181066 + 4.71 0.000 Intergenic Intergenic -8748 NM_016724 2348 Hs.73769 NM_000802 ENSG00000110195 FOLR1 FBP|FOLR|FRalpha folate receptor alpha protein-coding chr5-7152 chr5 2904893 2905103 + 4.71 0.000 Intergenic Intergenic -12856 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA chrX-4126 chrX 26650882 26651092 + 4.71 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 92650 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr3-6598 chr3 125448290 125448500 + 4.71 0.000 intron (NM_003794, intron 13 of 13) AluJo|SINE|Alu 71807 NR_073435 8723 Hs.507243 NM_003794 ENSG00000114520 SNX4 ATG24B sorting nexin 4 protein-coding chr20-3328 chr20 22809324 22809534 + 4.71 0.000 Intergenic Intergenic -124085 NR_146528 105372566 Hs.555065 NR_146527 LINC01747 - long intergenic non-protein coding RNA 1747 ncRNA chr12-7601 chr12 78635948 78636158 + 4.71 0.000 Intergenic Intergenic -227929 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr16-6190 chr16 26703609 26703819 + 4.71 0.000 Intergenic L1MB8|LINE|L1 -363213 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr15-3043 chr15 59791177 59791387 + 4.71 0.000 Intergenic MER52A|LTR|ERV1 -101962 NM_001368061 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr7-4876 chr7 112052607 112052817 + 4.71 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 153687 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr2-12428 chr2 57461186 57461396 + 4.71 0.000 Intergenic MIR|SINE|MIR -446360 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr4-6243 chr4 65679069 65679279 + 4.71 0.000 intron (NR_034138, intron 2 of 3) THE1B-int|LTR|ERVL-MaLR -8679 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr11-8449 chr11 114135876 114136086 + 4.71 0.000 intron (NM_006006, intron 2 of 6) intron (NM_006006, intron 2 of 6) 72770 NM_001354752 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chrX-4963 chrX 113496973 113497183 + 4.71 0.000 intron (NR_110399, intron 3 of 3) intron (NR_110399, intron 3 of 3) 441140 NR_131204 105463123 Hs.550218 NR_131204 XACT - X active specific transcript ncRNA chr1-13237 chr1 218105051 218105261 + 4.71 0.000 Intergenic MER5B|DNA|hAT-Charlie 61651 NR_110794 101929631 Hs.407614 NR_110794 ENSG00000232100 LINC01653 - long intergenic non-protein coding RNA 1653 ncRNA chr2-12623 chr2 72159540 72159750 + 4.71 0.000 Intergenic Intergenic -11783 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr3-9520 chr3 52134746 52134956 + 4.71 0.000 intron (NM_015426, intron 7 of 10) intron (NM_015426, intron 7 of 10) 19572 NM_001161580 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr11-10666 chr11 127544956 127545166 + 4.71 0.000 Intergenic HERVH-int|LTR|ERV1 273991 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr1-11799 chr1 25968453 25968663 + 4.71 0.000 intron (NM_000437, intron 10 of 10) intron (NM_000437, intron 10 of 10) 29505 NM_000437 5051 Hs.477083 NM_000437 ENSG00000158006 PAFAH2 HSD-PLA2 platelet activating factor acetylhydrolase 2 protein-coding chr5-8619 chr5 139350072 139350282 + 4.71 0.000 intron (NM_001033112, intron 1 of 3) AluSq|SINE|Alu 7743 NM_001033112 51247 Hs.396644 NM_016480 ENSG00000120727 PAIP2 PAIP-2|PAIP2A poly(A) binding protein interacting protein 2 protein-coding chr15-3579 chr15 44594627 44594837 + 4.71 0.000 intron (NM_025137, intron 26 of 39) AluJb|SINE|Alu 57585 NM_003758 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr7-9133 chr7 108982867 108983077 + 4.71 0.000 Intergenic L2a|LINE|L2 -98385 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr16-4681 chr16 79429652 79429862 + 4.71 0.000 Intergenic Intergenic 170980 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr6-8468 chr6 155417546 155417756 + 4.71 0.000 intron (NM_015718, intron 10 of 13) intron (NM_015718, intron 10 of 13) 38188 NM_015718 50508 Hs.247776 NM_015718 ENSG00000074771 NOX3 GP91-3|MOX-2 NADPH oxidase 3 protein-coding chr2-12647 chr2 73971833 73972043 + 4.71 0.000 intron (NR_104030, intron 1 of 1) intron (NR_104030, intron 1 of 1) 9501 NR_104029 100874048 Hs.600674 NR_104029 ENSG00000237883 DGUOK-AS1 - DGUOK antisense RNA 1 ncRNA chr5-6912 chr5 133886760 133886970 + 4.71 0.000 Intergenic AluJo|SINE|Alu -26812 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr6-8383 chr6 150025622 150025832 + 4.71 0.000 promoter-TSS (NM_130900) promoter-TSS (NM_130900) -195 NM_130900 154064 Hs.558659 NM_130900 ENSG00000155918 RAET1L ULBP6 retinoic acid early transcript 1L protein-coding chr1-12285 chr1 231550418 231550628 + 4.71 0.000 intron (NR_028393, intron 4 of 15) intron (NR_028393, intron 4 of 15) 21854 NM_005999 7257 Hs.13318 NM_005999 ENSG00000116918 TSNAX C3PO|TRAX translin associated factor X protein-coding chr11-10156 chr11 92841540 92841750 + 4.71 0.000 intron (NM_001008781, intron 17 of 24) intron (NM_001008781, intron 17 of 24) 73983 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr5-8801 chr5 149538983 149539193 + 4.71 0.000 intron (NM_001271742, intron 1 of 9) intron (NM_001271742, intron 1 of 9) 11277 NM_001271742 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding chr19-5329 chr19 3527732 3527942 + 4.71 0.000 intron (NM_001136198, intron 6 of 12) intron (NM_001136198, intron 6 of 12) 4881 NM_001136198 51343 Hs.413133 NM_016263 ENSG00000105325 FZR1 CDC20C|CDH1|FZR|FZR2|HCDH|HCDH1 fizzy and cell division cycle 20 related 1 protein-coding chr1-15698 chr1 168916093 168916303 + 4.71 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 129257 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chrX-1462 chrX 104250423 104250633 + 4.71 0.000 exon (NM_153448, exon 4 of 4) exon (NM_153448, exon 4 of 4) 4405 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chr12-6399 chr12 72442961 72443171 + 4.71 0.000 intron (NM_013381, intron 3 of 18) L2c|LINE|L2 -169557 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA chr1-11883 chr1 44202724 44202934 + 4.71 0.000 Intergenic L1M5|LINE|L1 -10642 NM_019100 55929 Hs.8008 NM_019100 ENSG00000178028 DMAP1 DNMAP1|DNMTAP1|EAF2|MEAF2|SWC4 DNA methyltransferase 1 associated protein 1 protein-coding chr9-8177 chr9 106203920 106204130 + 4.71 0.000 Intergenic L1PA7|LINE|L1 -396903 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr16-5465 chr16 2933421 2933631 + 4.71 0.000 exon (NM_001308068, exon 5 of 10) exon (NM_001308068, exon 5 of 10) 21547 NM_020912 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr20-2582 chr20 37945250 37945460 + 4.71 0.000 TTS (NM_080607) TTS (NM_080607) 42228 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr8-2990 chr8 100755659 100755869 + 4.71 0.000 Intergenic FLAM_C|SINE|Alu -33676 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr1-11009 chr1 219991157 219991367 + 4.71 0.000 intron (NM_004446, intron 18 of 31) intron (NM_004446, intron 18 of 31) 55243 NM_004446 2058 Hs.497788 NM_004446 ENSG00000136628 EPRS EARS|GLUPRORS|HLD15|PARS|PIG32|QARS|QPRS glutamyl-prolyl-tRNA synthetase protein-coding chr5-6884 chr5 128749483 128749693 + 4.71 0.000 Intergenic Intergenic -211343 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr11-8719 chr11 6846585 6846795 + 4.71 0.000 TTS (NM_178168) TTS (NM_178168) 1007 NM_178168 144124 Hs.447478 NM_178168 ENSG00000166363 OR10A5 JCG6|OR10A1|OR11-403 olfactory receptor family 10 subfamily A member 5 protein-coding chr9-8090 chr9 98475589 98475799 + 4.71 0.000 intron (NM_005458, intron 5 of 18) intron (NM_005458, intron 5 of 18) -220045 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr16-5464 chr16 2925325 2925535 + 4.71 0.000 intron (NM_020912, intron 2 of 8) (GTCCCACTCA)n|Simple_repeat|Simple_repeat 13451 NM_020912 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr3-9915 chr3 86943904 86944114 + 4.71 0.000 3' UTR (NM_016206, exon 4 of 4) 3' UTR (NM_016206, exon 4 of 4) 47140 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr20-3737 chr20 18255518 18255728 + 4.71 0.000 Intergenic MER65C|LTR|ERV1 -32605 NM_001282995 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr13-2506 chr13 55051030 55051240 + 4.71 0.000 Intergenic L1PB3|LINE|L1 -123319 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr14-4493 chr14 37056471 37056681 + 4.71 0.000 intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -104185 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr5-6876 chr5 124963650 124963860 + 4.71 0.000 Intergenic MER61-int|LTR|ERV1 -73076 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr15-4206 chr15 25775553 25775763 + 4.71 0.000 intron (NM_024490, intron 2 of 20) intron (NM_024490, intron 2 of 20) 73167 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr1-11984 chr1 87616557 87616767 + 4.71 0.000 Intergenic Intergenic -245007 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr4-5766 chr4 67443539 67443749 + 4.71 0.000 Intergenic L1MC3|LINE|L1 -21644 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr10-8281 chr10 76813689 76813899 + 4.71 0.000 Intergenic Intergenic -74250 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr6-7728 chr6 90099989 90100199 + 4.71 0.000 intron (NM_021813, intron 4 of 8) L1MB7|LINE|L1 196749 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr15-5273 chr15 99284284 99284494 + 4.71 0.000 intron (NR_135754, intron 3 of 9) intron (NR_135754, intron 3 of 9) 26864 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr11-4732 chr11 73572067 73572277 + 4.71 0.000 intron (NM_001286051, intron 1 of 5) SVA_D|Retroposon|SVA 25940 NM_015159 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr2-13449 chr2 144648806 144649016 + 4.71 0.000 Intergenic Intergenic -19056 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr14-4647 chr14 54654153 54654363 + 4.71 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 86646 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr11-6016 chr11 24530644 24530854 + 4.71 0.000 intron (NM_001252008, intron 1 of 11) L2|LINE|L2 33696 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr8-6029 chr8 23422208 23422418 + 4.71 0.000 Intergenic LTR3A|LTR|ERVK -18193 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr19-7064 chr19 53989079 53989289 + 4.71 0.000 3' UTR (NM_031895, exon 4 of 4) 3' UTR (NM_031895, exon 4 of 4) -1965 NR_102308 59285 Hs.631560 NM_031897 ENSG00000130433 CACNG6 - calcium voltage-gated channel auxiliary subunit gamma 6 protein-coding chr7-7782 chr7 1968144 1968354 + 4.71 0.000 intron (NM_001013837, intron 15 of 18) CpG -27678 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr7-9690 chr7 153518534 153518744 + 4.71 0.000 Intergenic Intergenic -106405 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr1-12775 chr1 77053334 77053544 + 4.71 0.000 intron (NM_030965, intron 4 of 4) L2a|LINE|L2 -6704 NR_106978 102466995 NR_106978 ENSG00000276081 MIR7156 hsa-mir-7156 microRNA 7156 ncRNA chr14-2361 chr14 29807286 29807496 + 4.71 0.000 intron (NM_001330069, intron 1 of 18) Tigger1|DNA|TcMar-Tigger 119705 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr2-14411 chr2 221249980 221250190 + 4.71 0.000 Intergenic L1ME3Cz|LINE|L1 322219 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr5-8831 chr5 150861311 150861521 + 4.71 0.000 intron (NM_001346557, intron 2 of 3) MLT1G|LTR|ERVL-MaLR 14893 NM_001145805 345611 Hs.519680 NM_001145805 ENSG00000237693 IRGM IFI1|IRGM1|LRG-47|LRG47 immunity related GTPase M protein-coding chr13-3828 chr13 47811841 47812051 + 4.71 0.000 Intergenic Intergenic 120676 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr17-6323 chr17 61608244 61608454 + 4.71 0.000 Intergenic AluSz|SINE|Alu -17130 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr5-8146 chr5 100762312 100762522 + 4.71 0.000 Intergenic L2|LINE|L2 54148 NR_031686 100302288 NR_031686 ENSG00000221263 MIR548P MIRN548P|hsa-mir-548p microRNA 548p ncRNA chr14-3303 chr14 85276739 85276949 + 4.71 0.000 Intergenic MamGypsy2-LTR|LTR|Gypsy 4912 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr8-3638 chr8 3552999 3553209 + 4.71 0.000 intron (NM_033225, intron 10 of 69) intron (NM_033225, intron 10 of 69) -824653 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr5-8841 chr5 151333576 151333786 + 4.71 0.000 intron (NM_181776, intron 6 of 9) AluSx3|SINE|Alu 13878 NM_181776 153201 Hs.483877 NM_181776 ENSG00000186335 SLC36A2 PAT2|TRAMD1 solute carrier family 36 member 2 protein-coding chr6-3102 chr6 91450313 91450523 + 4.71 0.000 Intergenic MER39|LTR|ERV1 -71242 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr9-7988 chr9 93280211 93280421 + 4.71 0.000 intron (NM_001282394, intron 19 of 29) L1ME1|LINE|L1 65987 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr6-6596 chr6 144408683 144408893 + 4.71 0.000 intron (NM_007124, intron 2 of 73) intron (NM_007124, intron 2 of 73) 3133 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr10-8505 chr10 90492569 90492779 + 4.71 0.000 intron (NR_110657, intron 2 of 6) L1P4a|LINE|L1 48131 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr9-7712 chr9 72909382 72909592 + 4.71 0.000 intron (NM_000689, intron 11 of 12) intron (NM_000689, intron 11 of 12) -35378 NR_121181 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr2-6207 chr2 24159768 24159978 + 4.71 0.000 intron (NM_001145710, intron 7 of 10) L1MEd|LINE|L1 -15180 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr11-10566 chr11 122179016 122179226 + 4.71 0.000 intron (NR_024430, intron 2 of 3) intron (NR_024430, intron 2 of 3) 1511 NR_137185 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr6-7395 chr6 50826927 50827137 + 4.71 0.000 intron (NM_003221, intron 2 of 6) intron (NM_003221, intron 2 of 6) 8161 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr1-4945 chr1 51693216 51693426 + 4.71 0.000 intron (NM_148906, intron 2 of 22) AluJo|SINE|Alu -36529 NM_148904 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr1-12219 chr1 207776212 207776422 + 4.71 0.000 intron (NM_172352, intron 7 of 11) L1PA6|LINE|L1 24263 NM_172353 4179 Hs.510402 NM_002389 ENSG00000117335 CD46 AHUS2|MCP|MIC10|TLX|TRA2.10 CD46 molecule protein-coding chr10-6926 chr10 50876603 50876813 + 4.71 0.000 intron (NM_001198818, intron 1 of 13) MLT2B4|LTR|ERVL 8919 NM_001370130 29974 Hs.282795 NM_014576 ENSG00000148584 A1CF ACF|ACF64|ACF65|APOBEC1CF|ASP APOBEC1 complementation factor protein-coding chr12-7604 chr12 78878682 78878892 + 4.71 0.000 intron (NM_001291901, intron 1 of 9) intron (NM_001291901, intron 1 of 9) 14013 NM_001291901 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr20-3674 chr20 12350131 12350341 + 4.71 0.000 Intergenic Intergenic 432343 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr17-3216 chr17 6070235 6070445 + 4.71 0.000 promoter-TSS (NM_015253) promoter-TSS (NM_015253) -274 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chrX-1872 chrX 120505260 120505470 + 4.71 0.000 Intergenic L1MC|LINE|L1 -36016 NM_001122606 3920 Hs.496684 NM_002294 ENSG00000005893 LAMP2 CD107b|LAMP-2|LAMPB|LGP-96|LGP110 lysosomal associated membrane protein 2 protein-coding chr15-2918 chr15 44328200 44328410 + 4.71 0.000 intron (NR_157849, intron 2 of 9) AluSz6|SINE|Alu 39586 NR_157849 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chr1-14976 chr1 89472629 89472839 + 4.71 0.000 Intergenic L1PA11|LINE|L1 -52095 NM_001134476 23507 Hs.482017 NM_015350 ENSG00000197147 LRRC8B TA-LRRP|TALRRP leucine rich repeat containing 8 VRAC subunit B protein-coding chr19-6206 chr19 5761506 5761716 + 4.71 0.000 intron (NM_152784, intron 15 of 21) THE1D|LTR|ERVL-MaLR 23135 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chr14-3083 chr14 63831504 63831714 + 4.71 0.000 Intergenic AluSx|SINE|Alu -21356 NM_182914 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr3-8884 chr3 10828543 10828753 + 4.71 0.000 3' UTR (NM_001317406, exon 4 of 4) 3' UTR (NM_001317406, exon 4 of 4) 12420 NM_001317406 6538 Hs.655078 NM_014229 ENSG00000132164 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 member 11 protein-coding chr19-6613 chr19 29337350 29337560 + 4.71 0.000 intron (NR_040029, intron 9 of 9) intron (NR_040029, intron 9 of 9) -124304 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr10-8804 chr10 107732122 107732332 + 4.71 0.000 Intergenic L1PA13|LINE|L1 337066 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr3-9027 chr3 21756156 21756366 + 4.71 0.000 Intergenic L2a|LINE|L2 -5051 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr7-8864 chr7 89965914 89966124 + 4.71 0.000 intron (NR_110029, intron 2 of 2) FordPrefect|DNA|hAT-Tip100 -153381 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr2-12187 chr2 41054555 41054765 + 4.71 0.000 Intergenic L1PA6|LINE|L1 -542225 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr1-14083 chr1 30009940 30010150 + 4.71 0.000 Intergenic MER52A|LTR|ERV1 27567 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr9-8103 chr9 98846864 98847074 + 4.71 0.000 intron (NM_024642, intron 9 of 9) intron (NM_024642, intron 9 of 9) 39299 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chr17-7737 chr17 33873807 33874017 + 4.71 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 282894 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr4-7108 chr4 34236861 34237071 + 4.71 0.000 intron (NR_147184, intron 2 of 3) THE1D|LTR|ERVL-MaLR 32781 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr5-8415 chr5 127368028 127368238 + 4.71 0.000 intron (NM_001308121, intron 4 of 13) Charlie15b|DNA|hAT-Charlie 77337 NM_001256545 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr13-3043 chr13 29428357 29428567 + 4.71 0.000 promoter-TSS (NM_015233) promoter-TSS (NM_015233) -198 NM_015233 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr7-7390 chr7 68921655 68921865 + 4.71 0.000 Intergenic LTR1D1|LTR|ERV1 675864 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr4-6838 chr4 8509192 8509402 + 4.71 0.000 Intergenic Intergenic 68500 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr9-8637 chr9 129242890 129243100 + 4.71 0.000 Intergenic Intergenic -39421 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr9-3017 chr9 122981977 122982187 + 4.71 0.000 intron (NM_012197, intron 2 of 25) intron (NM_012197, intron 2 of 25) 41062 NM_012197 23637 Hs.271341 NM_012197 ENSG00000011454 RABGAP1 GAPCENA|TBC1D11 RAB GTPase activating protein 1 protein-coding chr5-6640 chr5 44176518 44176728 + 4.71 0.000 Intergenic L1PA14|LINE|L1 -212109 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr20-4423 chr20 60108001 60108211 + 4.71 0.000 Intergenic MER45A|DNA|hAT-Tip100 20420 NR_109917 729296 Hs.534781 NR_109916 LOC729296 - uncharacterized LOC729296 ncRNA chr10-7881 chr10 49013548 49013758 + 4.71 0.000 TTS (NM_001031746) TTS (NM_001031746) -28066 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr1-13835 chr1 19780994 19781204 + 4.71 0.000 intron (NM_001349112, intron 2 of 14) Alu|SINE|Alu 18250 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr3-9108 chr3 28991012 28991222 + 4.71 0.000 Intergenic Intergenic 289822 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr7-6090 chr7 117545010 117545220 + 4.71 0.000 intron (NR_149084, intron 2 of 2) THE1B|LTR|ERVL-MaLR 19561 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr10-3938 chr10 95590085 95590295 + 4.71 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -28819 NM_024991 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr4-7100 chr4 33586887 33587097 + 4.71 0.000 Intergenic AluY|SINE|Alu 452901 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr19-7016 chr19 49746296 49746506 + 4.71 0.000 intron (NM_021733, intron 6 of 10) CpG 16905 NM_021733 60385 Hs.515858 NM_021733 ENSG00000126467 TSKS PPP1R161|STK22S1|TSKS1|TSSKS testis specific serine kinase substrate protein-coding chr6-6333 chr6 51601611 51601821 + 4.71 0.000 Intergenic Intergenic -20154 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr1-15917 chr1 185679287 185679497 + 4.71 0.000 Intergenic Intergenic -50904 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr4-8213 chr4 136126659 136126869 + 4.71 0.000 Intergenic Intergenic -213084 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr3-9208 chr3 37376165 37376375 + 4.71 0.000 Intergenic MSTA|LTR|ERVL-MaLR -9999 NM_178344 339883 Hs.475945 NM_178339 ENSG00000198590 C3orf35 APRG1 chromosome 3 open reading frame 35 protein-coding chr3-4753 chr3 98454521 98454731 + 4.71 0.000 Intergenic L2b|LINE|L2 -14854 NM_001004736 26339 Hs.621533 NM_001004736 ENSG00000232382 OR5K1 HSHTPCRX10|HTPCRX10|OR3-8 olfactory receptor family 5 subfamily K member 1 protein-coding chr3-10513 chr3 137594943 137595153 + 4.71 0.000 Intergenic CR1_Mam|LINE|CR1 -169267 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding chr9-7488 chr9 29709593 29709803 + 4.71 0.000 Intergenic L1PB1|LINE|L1 -496097 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr13-3439 chr13 104030115 104030325 + 4.71 0.000 Intergenic Intergenic 605020 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr1-12000 chr1 92489411 92489621 + 4.71 0.000 Intergenic MIRb|SINE|MIR -2591 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr14-4007 chr14 39527038 39527248 + 4.71 0.000 Intergenic L1PA3|LINE|L1 -94643 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr7-4801 chr7 93218006 93218216 + 4.71 0.000 intron (NM_001346642, intron 2 of 9) L2a|LINE|L2 1460 NM_198151 253012 Hs.443169 NM_198151 ENSG00000188175 HEPACAM2 MIKI HEPACAM family member 2 protein-coding chr3-10988 chr3 178902357 178902567 + 4.71 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -42057 NR_126560 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr13-3536 chr13 23754329 23754539 + 4.71 0.000 intron (NM_005932, intron 18 of 18) intron (NM_005932, intron 18 of 18) -134434 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr1-12188 chr1 200627740 200627950 + 4.71 0.000 Intergenic Intergenic -7094 NM_014875 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding chr7-8005 chr7 16712592 16712802 + 4.71 0.000 Intergenic Intergenic -41058 NM_014399 27075 Hs.364544 NM_014399 ENSG00000106537 TSPAN13 NET-6|NET6|TM4SF13 tetraspanin 13 protein-coding chr11-4475 chr11 107610900 107611110 + 4.71 0.000 intron (NM_001308018, intron 1 of 12) L1PA16|LINE|L1 19858 NM_018712 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr4-7063 chr4 30473780 30473990 + 4.71 0.000 Intergenic Intergenic -246484 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr5-6780 chr5 89744111 89744321 + 4.71 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 272504 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr3-9675 chr3 63264762 63264972 + 4.71 0.000 Intergenic THE1D|LTR|ERVL-MaLR -13441 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr11-8785 chr11 10484750 10484960 + 4.71 0.000 exon (NM_001172430, exon 5 of 15) exon (NM_001172430, exon 5 of 15) 23471 NR_039705 100616263 NR_039705 ENSG00000283813 MIR4485 mir-4485 microRNA 4485 ncRNA chr19-6254 chr19 7458738 7458948 + 4.71 0.000 intron (NM_001130955, intron 9 of 19) intron (NM_001130955, intron 9 of 19) 19155 NM_001130955 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr3-9019 chr3 20938140 20938350 + 4.71 0.000 Intergenic L1ME3A|LINE|L1 -467481 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr10-9076 chr10 125171015 125171225 + 4.71 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -10090 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr10-7781 chr10 35353994 35354204 + 4.71 0.000 intron (NM_001282852, intron 1 of 8) MLT1F2|LTR|ERVL-MaLR 17225 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr5-5043 chr5 89674176 89674386 + 4.71 0.000 Intergenic AluSq2|SINE|Alu 342439 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr10-8694 chr10 101711715 101711925 + 4.71 0.000 Intergenic AluJb|SINE|Alu -16525 NM_001323541 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr18-3061 chr18 30964495 30964705 + 4.71 0.000 Intergenic L2c|LINE|L2 78142 NM_001941 1825 Hs.41690 NM_001941 ENSG00000134762 DSC3 CDHF3|DSC|DSC1|DSC2|DSC4|HT-CP desmocollin 3 protein-coding chr16-4496 chr16 57661005 57661215 + 4.71 0.000 intron (NM_001370429, intron 12 of 13) MIRc|SINE|MIR -7196 NM_170776 222487 Hs.383403 NM_170776 ENSG00000182885 ADGRG3 GPR97|PB99|PGR26 adhesion G protein-coupled receptor G3 protein-coding chr16-2062 chr16 74337129 74337339 + 4.71 0.000 intron (NR_026950, intron 12 of 14) AluJb|SINE|Alu 31021 NR_026950 283922 Hs.558726 NR_026950 ENSG00000214331 LOC283922 - pyruvate dehydrogenase phosphatase regulatory subunit pseudogene pseudo chr3-9422 chr3 48672305 48672515 + 4.71 0.000 Intergenic Intergenic 8642 NR_111921 102724368 Hs.663571 NR_111921 ENSG00000228350 LINC02585 CELSR3-AS1 long intergenic non-protein coding RNA 2585 ncRNA chr12-3743 chr12 39885218 39885428 + 4.71 0.000 intron (NM_052885, intron 4 of 9) intron (NM_052885, intron 4 of 9) 220758 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr6-8228 chr6 136467067 136467277 + 4.71 0.000 promoter-TSS (NM_001198615) promoter-TSS (NM_001198615) -297 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr1-13894 chr1 21878650 21878860 + 4.71 0.000 intron (NM_005529, intron 18 of 96) intron (NM_005529, intron 18 of 96) 58555 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr20-2306 chr20 6416340 6416550 + 4.71 0.000 Intergenic LTR33|LTR|ERVL -10287 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chr5-8089 chr5 95892812 95893022 + 4.71 0.000 intron (NM_012081, intron 9 of 11) intron (NM_012081, intron 9 of 11) 40685 NR_026936 202299 Hs.8373 NM_175616 ENSG00000236882 LINC01554 C5orf27|FIS long intergenic non-protein coding RNA 1554 ncRNA chr3-4746 chr3 85928064 85928274 + 4.71 0.000 intron (NM_001256502, intron 6 of 10) AluSc|SINE|Alu -100119 NR_046752 100874037 Hs.570566 NR_046752 ENSG00000241648 CADM2-AS2 - CADM2 antisense RNA 2 ncRNA chr19-4455 chr19 4946106 4946316 + 4.71 0.000 intron (NM_001290051, intron 10 of 16) L1MB3|LINE|L1 13524 NR_039902 100616337 NR_039902 ENSG00000263409 MIR4747 mir-4747 microRNA 4747 ncRNA chr11-5052 chr11 102341781 102341991 + 4.71 0.000 Intergenic Intergenic -5296 NM_001166 329 Hs.696238 NM_001166 ENSG00000110330 BIRC2 API1|HIAP2|Hiap-2|MIHB|RNF48|c-IAP1|cIAP1 baculoviral IAP repeat containing 2 protein-coding chr10-6830 chr10 21525539 21525749 + 4.71 0.000 promoter-TSS (NM_207371) promoter-TSS (NM_207371) 38 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr1-14206 chr1 34632589 34632799 + 4.71 0.000 Intergenic HERVH-int|LTR|ERV1 37000 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr3-3392 chr3 56714778 56714988 + 4.71 0.000 Intergenic AluSx|SINE|Alu -31618 NM_001365636 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chr11-8917 chr11 16989684 16989894 + 4.71 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) 24625 NM_001329630 144100 Hs.12332 NM_175058 ENSG00000166689 PLEKHA7 - pleckstrin homology domain containing A7 protein-coding chr9-7715 chr9 73086582 73086792 + 4.71 0.000 Intergenic Intergenic -65178 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr20-3007 chr20 47693807 47694017 + 4.71 0.000 intron (NM_198596, intron 4 of 20) MIR|SINE|MIR 92152 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr1-14868 chr1 80029010 80029220 + 4.71 0.000 Intergenic Charlie1a|DNA|hAT-Charlie -506640 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr15-3562 chr15 39894355 39894565 + 4.71 0.000 intron (NM_001271854, intron 1 of 3) SVA_F|Retroposon|SVA 26432 NM_007223 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr2-14173 chr2 205463896 205464106 + 4.71 0.000 intron (NM_057177, intron 19 of 21) intron (NM_057177, intron 19 of 21) -218499 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr14-3979 chr14 32507476 32507686 + 4.71 0.000 intron (NM_004274, intron 2 of 13) intron (NM_004274, intron 2 of 13) 178283 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr9-7653 chr9 68638244 68638454 + 4.71 0.000 Intergenic MIRb|SINE|MIR -66891 NM_003558 8395 Hs.534371 NM_003558 ENSG00000107242 PIP5K1B MSS4|STM7 phosphatidylinositol-4-phosphate 5-kinase type 1 beta protein-coding chr6-6363 chr6 64839860 64840070 + 4.71 0.000 intron (NM_001292009, intron 19 of 43) MLT1A1|LTR|ERVL-MaLR -461453 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr22-2645 chr22 34877518 34877728 + 4.71 0.000 intron (NR_138042, intron 3 of 4) intron (NR_138042, intron 3 of 4) 120293 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr19-6664 chr19 33950224 33950434 + 4.71 0.000 Intergenic Intergenic 153459 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr19-4717 chr19 19132935 19133145 + 4.71 0.000 intron (NM_017814, intron 3 of 11) intron (NM_017814, intron 3 of 11) 5438 NM_017814 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr4-3796 chr4 108168859 108169069 + 4.71 0.000 promoter-TSS (NM_016269) promoter-TSS (NM_016269) -8 NM_001130713 51176 Hs.743478 NM_016269 ENSG00000138795 LEF1 LEF-1|TCF10|TCF1ALPHA|TCF7L3 lymphoid enhancer binding factor 1 protein-coding chr4-7936 chr4 108968009 108968219 + 4.71 0.000 intron (NM_001256074, intron 6 of 31) intron (NM_001256074, intron 6 of 31) -205061 NM_001146627 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr8-5536 chr8 69158875 69159085 + 4.71 0.000 Intergenic Intergenic -54790 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr20-3399 chr20 38579628 38579838 + 4.71 0.000 TTS (NM_001282918) TTS (NM_001282918) -1464 NR_130907 149685 Hs.368028 NM_174906 ENSG00000182035 ADIG SMAF1 adipogenin protein-coding chr19-7011 chr19 49614883 49615093 + 4.71 0.000 exon (NM_020719, exon 8 of 14) exon (NM_020719, exon 8 of 14) 23806 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding chr17-8042 chr17 50595345 50595555 + 4.71 0.000 intron (NR_046056, intron 14 of 34) intron (NR_046056, intron 14 of 34) -33342 NR_038439 253962 Hs.558704 NR_038439 ENSG00000250107 CACNA1G-AS1 CAS1 CACNA1G antisense RNA 1 ncRNA chr3-7092 chr3 179681088 179681298 + 4.71 0.000 intron (NM_003940, intron 1 of 20) intron (NM_003940, intron 1 of 20) 28153 NM_003940 8975 Hs.175322 NM_003940 ENSG00000058056 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 protein-coding chr8-5264 chr8 135585093 135585303 + 4.71 0.000 intron (NM_006558, intron 6 of 8) AluSz|SINE|Alu 127742 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr10-7638 chr10 24357817 24358027 + 4.71 0.000 intron (NM_019590, intron 2 of 20) intron (NM_019590, intron 2 of 20) 82237 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr2-10741 chr2 33223716 33223926 + 4.71 0.000 intron (NM_206943, intron 9 of 33) L3|LINE|CR1 89224 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chrX-2186 chrX 39532263 39532473 + 4.71 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -128848 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr7-4404 chr7 98887624 98887834 + 4.71 0.000 intron (NM_003496, intron 3 of 70) AluSq2|SINE|Alu 6032 NR_132754 106633801 NR_132754 SCARNA28 ZL1 small Cajal body-specific RNA 28 ncRNA chr11-9039 chr11 27001427 27001637 + 4.71 0.000 Intergenic AluSz6|SINE|Alu 7420 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr20-1288 chr20 49982669 49982879 + 4.71 0.000 promoter-TSS (NM_005985) promoter-TSS (NM_005985) -206 NM_005985 6615 Hs.48029 NM_005985 ENSG00000124216 SNAI1 SLUGH2|SNA|SNAH|SNAIL|SNAIL1|dJ710H13.1 snail family transcriptional repressor 1 protein-coding chr16-3310 chr16 90116613 90116823 + 4.71 0.000 intron (NR_126161, intron 3 of 3) intron (NR_126161, intron 3 of 3) 14454 NR_126161 100996541 Hs.652849 NR_126161 FAM157C - family with sequence similarity 157 member C ncRNA chr2-10639 chr2 15799258 15799468 + 4.71 0.000 Intergenic Intergenic 108581 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA chr5-6774 chr5 87652777 87652987 + 4.71 0.000 Intergenic AluJb|SINE|Alu -9160 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA chr6-4982 chr6 107390972 107391182 + 4.71 0.000 intron (NM_020381, intron 1 of 7) intron (NM_020381, intron 1 of 7) 68487 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr16-5297 chr16 67794856 67795066 + 4.71 0.000 intron (NM_001320238, intron 1 of 12) intron (NM_001320238, intron 1 of 12) 11599 NM_001320240 57610 Hs.368569 NM_020850 ENSG00000141084 RANBP10 - RAN binding protein 10 protein-coding chr3-6634 chr3 127412386 127412596 + 4.71 0.000 Intergenic LTR5_Hs|LTR|ERVK -21821 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr2-8147 chr2 82970295 82970505 + 4.71 0.000 Intergenic L1M1|LINE|L1 113597 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr15-5191 chr15 93841268 93841478 + 4.71 0.000 Intergenic L1MCa|LINE|L1 -15187 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr3-8546 chr3 145305861 145306071 + 4.71 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 763219 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr6-2476 chr6 44653775 44653985 + 4.71 0.000 Intergenic Intergenic -101999 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr3-9622 chr3 58219438 58219648 + 4.71 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -8540 NM_001256560 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding chr10-2867 chr10 84381727 84381937 + 4.71 0.000 intron (NM_018999, intron 3 of 10) AluSx|SINE|Alu -43107 NM_001284243 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr18-2307 chr18 79442741 79442951 + 4.71 0.000 intron (NM_001278672, intron 3 of 8) intron (NM_001278672, intron 3 of 8) 42547 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr2-13312 chr2 131064890 131065100 + 4.71 0.000 intron (NM_001321746, intron 3 of 6) L1MEf|LINE|L1 28167 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr15-4449 chr15 47133350 47133560 + 4.71 0.000 Intergenic SVA_E|Retroposon|SVA -50634 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr12-4431 chr12 9909748 9909958 + 4.71 0.000 intron (NM_207375, intron 4 of 4) HERVI-int|LTR|ERV1 22517 NM_207375 387836 Hs.527665 NM_207375 ENSG00000188393 CLEC2A INPE5792|KACL|PILAR|UNQ5792 C-type lectin domain family 2 member A protein-coding chr18-3233 chr18 48017451 48017661 + 4.71 0.000 Intergenic Intergenic -86410 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr17-6289 chr17 44243583 44243793 + 4.71 0.000 Intergenic L1MC5|LINE|L1 -22384 NR_045058 7343 Hs.89781 NM_014233 ENSG00000108312 UBTF CONDBA|NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor protein-coding chrX-3128 chrX 9923391 9923601 + 4.71 0.000 intron (NM_001320663, intron 1 of 5) intron (NM_001320663, intron 1 of 5) 11004 NM_001320663 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr6-4795 chr6 77692667 77692877 + 4.71 0.000 intron (NM_001282136, intron 2 of 4) intron (NM_001282136, intron 2 of 4) 39733 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr19-3670 chr19 9970256 9970466 + 4.71 0.000 intron (NM_015719, intron 54 of 66) intron (NM_015719, intron 54 of 66) -33846 NM_058164 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr15-4392 chr15 43057010 43057220 + 4.71 0.000 intron (NM_174916, intron 10 of 46) intron (NM_174916, intron 10 of 46) 48923 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr17-8189 chr17 62328246 62328456 + 4.71 0.000 Intergenic Intergenic -41867 NM_001144933 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding chr4-6498 chr4 154971118 154971328 + 4.71 0.000 Intergenic Intergenic 189718 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr7-8495 chr7 51415821 51416031 + 4.71 0.000 Intergenic Intergenic -22670 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr16-6853 chr16 82839397 82839607 + 4.71 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 66183 NR_110938 101928446 Hs.684007 NR_110938 ENSG00000260862 LOC101928446 - uncharacterized LOC101928446 ncRNA chr3-11042 chr3 182929436 182929646 + 4.71 0.000 Intergenic AluSx|SINE|Alu 50997 NM_020640 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr9-8342 chr9 116181970 116182180 + 4.71 0.000 intron (NM_002581, intron 1 of 21) intron (NM_002581, intron 1 of 21) 28284 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr3-7399 chr3 95801617 95801827 + 4.71 0.000 Intergenic AluYb8|SINE|Alu -118529 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr7-6077 chr7 115503714 115503924 + 4.71 0.000 Intergenic Intergenic 77622 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr3-8298 chr3 59744035 59744245 + 4.71 0.000 Intergenic Intergenic -85643 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr19-4240 chr19 50488811 50489021 + 4.71 0.000 3' UTR (NM_175063, exon 8 of 8) 3' UTR (NM_175063, exon 8 of 8) -12068 NM_138411 112703 Hs.448941 NM_138411 ENSG00000142530 FAM71E1 - family with sequence similarity 71 member E1 protein-coding chr2-11863 chr2 22089327 22089537 + 4.71 0.000 Intergenic MLT2A2|LTR|ERVL -378780 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chrX-1934 chrX 2828715 2828925 + 4.71 0.000 promoter-TSS (NM_003918) promoter-TSS (NM_003918) -2 NM_001184703 8908 Hs.567381 NM_003918 ENSG00000056998 GYG2 GN-2|GN2 glycogenin 2 protein-coding chr18-1686 chr18 77695304 77695514 + 4.71 0.000 Intergenic AluSq|SINE|Alu 298318 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr18-2850 chr18 8263755 8263965 + 4.71 0.000 intron (NM_002845, intron 17 of 30) MER21B|LTR|ERVL 103174 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr1-15711 chr1 169824957 169825167 + 4.71 0.000 intron (NM_001366772, intron 9 of 22) L2a|LINE|L2 30022 NM_001366769 55732 Hs.443551 NM_018186 ENSG00000000460 C1orf112 - chromosome 1 open reading frame 112 protein-coding chr8-6895 chr8 101301197 101301407 + 4.71 0.000 Intergenic L2b|LINE|L2 -67591 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr18-3456 chr18 68687578 68687788 + 4.71 0.000 exon (NM_001350516, exon 8 of 14) exon (NM_001350516, exon 8 of 14) 27425 NM_001350512 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr2-10352 chr2 164657813 164658023 + 4.71 0.000 TTS (NM_001365671) TTS (NM_001365671) 29859 NR_033309 100337591 Hs.664357 NR_033309 ENSG00000206869 SNORA70F U70F small nucleolar RNA, H/ACA box 70F snoRNA chr2-9924 chr2 236790327 236790537 + 4.71 0.000 Intergenic Intergenic 220607 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr8-2614 chr8 60678361 60678571 + 4.71 0.000 promoter-TSS (NM_017780) promoter-TSS (NM_017780) -274 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr6-6248 chr6 33485729 33485939 + 4.71 0.000 Intergenic SVA_D|Retroposon|SVA 31258 NM_152735 221504 Hs.591805 NM_152735 ENSG00000213588 ZBTB9 ZNF919 zinc finger and BTB domain containing 9 protein-coding chr7-8075 chr7 24820939 24821149 + 4.71 0.000 intron (NR_104111, intron 15 of 21) intron (NR_104111, intron 15 of 21) -63105 NM_004403 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chrX-2618 chrX 108156250 108156460 + 4.71 0.000 3' UTR (NM_001847, exon 45 of 45) 3' UTR (NM_001847, exon 45 of 45) 64577 NM_052936 115201 Hs.8763 NM_052936 ENSG00000101844 ATG4A APG4A|AUTL2 autophagy related 4A cysteine peptidase protein-coding chr1-12106 chr1 158916003 158916213 + 4.71 0.000 Intergenic Intergenic -15444 NM_198930 149628 Hs.710248 NM_152501 ENSG00000163564 PYHIN1 IFIX pyrin and HIN domain family member 1 protein-coding chr8-5058 chr8 29101747 29101957 + 4.71 0.000 intron (NM_015254, intron 35 of 39) intron (NM_015254, intron 35 of 39) 161218 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr18-1415 chr18 7108540 7108750 + 4.71 0.000 intron (NM_005559, intron 1 of 62) AluSx1|SINE|Alu 9152 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr20-2301 chr20 5870916 5871126 + 4.71 0.000 Intergenic Intergenic -40489 NM_001819 1114 Hs.516874 NM_001819 ENSG00000089199 CHGB SCG1 chromogranin B protein-coding chr13-3601 chr13 28920946 28921156 + 4.71 0.000 intron (NM_001366651, intron 2 of 14) L1MA3|LINE|L1 100712 NM_001366651 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr2-14226 chr2 210677892 210678102 + 4.71 0.000 non-coding (NR_161225, exon 39 of 39) non-coding (NR_161225, exon 39 of 39) 60426 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr3-10267 chr3 124238157 124238367 + 4.71 0.000 intron (NM_001024660, intron 3 of 59) L3|LINE|CR1 105333 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr15-4238 chr15 33188199 33188409 + 4.71 0.000 intron (NM_001277313, intron 2 of 20) AluSx3|SINE|Alu 6410 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr5-8049 chr5 91900451 91900661 + 4.71 0.000 Intergenic Intergenic -517239 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr18-3122 chr18 37414372 37414582 + 4.71 0.000 intron (NM_001353724, intron 2 of 12) (TCCA)n|Simple_repeat|Simple_repeat 52027 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr3-10023 chr3 102374994 102375204 + 4.71 0.000 Intergenic Intergenic -59916 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr11-10378 chr11 112483948 112484158 + 4.71 0.000 promoter-TSS (NR_120560) promoter-TSS (NR_120560) -292 NR_120560 101928823 Hs.126118 NR_120559 ENSG00000254968 LINC02763 - long intergenic non-protein coding RNA 2763 ncRNA chr3-10564 chr3 141337401 141337611 + 4.71 0.000 intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) 13320 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr7-9680 chr7 153012381 153012591 + 4.71 0.000 Intergenic Intergenic 252734 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr3-11002 chr3 179892577 179892787 + 4.71 0.000 intron (NM_001256753, intron 1 of 12) intron (NM_001256753, intron 1 of 12) -5512 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr3-9246 chr3 38786156 38786366 + 4.71 0.000 intron (NM_006514, intron 3 of 26) L1PA7|LINE|L1 7749 NM_001293307 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr15-5178 chr15 93021887 93022097 + 4.71 0.000 intron (NM_001271, intron 38 of 38) L1MEc|LINE|L1 51164 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr1-14533 chr1 51627828 51628038 + 4.71 0.000 intron (NM_148906, intron 1 of 22) L2a|LINE|L2 10841 NR_036662 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr12-6651 chr12 830182 830392 + 4.71 0.000 intron (NM_001184985, intron 4 of 27) intron (NM_001184985, intron 4 of 27) 77364 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr3-10188 chr3 119341940 119342150 + 4.71 0.000 intron (NM_020754, intron 1 of 11) intron (NM_020754, intron 1 of 11) -19285 NR_046748 100874246 Hs.607097 NR_046748 ENSG00000241155 ARHGAP31-AS1 - ARHGAP31 antisense RNA 1 ncRNA chr2-13481 chr2 147577889 147578099 + 4.71 0.000 Intergenic Intergenic -266523 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr11-7512 chr11 7174704 7174914 + 4.71 0.000 Intergenic L1PA7|LINE|L1 -59957 NR_031683 100313774 NR_031683 ENSG00000221703 MIR302E MIRN302E microRNA 302e ncRNA chr3-9968 chr3 96201138 96201348 + 4.71 0.000 Intergenic L1PA15|LINE|L1 -158721 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chr17-3723 chr17 19017947 19018157 + 4.71 0.000 intron (NM_001282417, intron 11 of 14) intron (NM_001282417, intron 11 of 14) -13288 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr6-5076 chr6 116764590 116764800 + 4.71 0.000 intron (NM_001085480, intron 2 of 3) CpG 1024 NM_001085480 221303 Hs.126712 NM_001085480 ENSG00000183807 FAM162B C6orf189|bA86F4.2 family with sequence similarity 162 member B protein-coding chr1-8465 chr1 112795415 112795625 + 4.71 0.000 Intergenic Intergenic 55123 NR_103746 100996702 Hs.632431 NR_103746 ENSG00000215866 LINC01356 - long intergenic non-protein coding RNA 1356 ncRNA chr7-8238 chr7 35274597 35274807 + 4.71 0.000 Intergenic L1M2|LINE|L1 -20602 NM_001077653 57057 Hs.404167 NM_020417 ENSG00000164532 TBX20 ASD4 T-box transcription factor 20 protein-coding chr3-9024 chr3 21379718 21379928 + 4.71 0.000 Intergenic HERVH-int|LTR|ERV1 -25903 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr20-2356 chr20 15310317 15310527 + 4.71 0.000 intron (NM_001351663, intron 6 of 17) intron (NM_001351663, intron 6 of 17) 113582 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr16-5375 chr16 87293984 87294194 + 4.71 0.000 Intergenic G-rich|Low_complexity|Low_complexity -1637 NR_104667 101928682 Hs.149004 NR_104667 ENSG00000261697 LOC101928682 - uncharacterized LOC101928682 ncRNA chr6-7783 chr6 97409347 97409557 + 4.71 0.000 intron (NR_110757, intron 1 of 4) L1PA8|LINE|L1 103866 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr13-2832 chr13 107809075 107809285 + 4.71 0.000 intron (NR_046848, intron 1 of 1) LTR65|LTR|ERV1 26278 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA chr5-4956 chr5 77636955 77637165 + 4.71 0.000 exon (NM_032109, exon 2 of 3) exon (NM_032109, exon 2 of 3) 1637 NM_032109 23440 Hs.202247 NM_032109 ENSG00000171540 OTP - orthopedia homeobox protein-coding chr4-6529 chr4 169486269 169486479 + 4.71 0.000 intron (NM_001199400, intron 20 of 32) intron (NM_001199400, intron 20 of 32) 126209 NM_001199398 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr7-6600 chr7 96969845 96970055 + 4.71 0.000 intron (NR_015448, intron 2 of 2) intron (NR_015448, intron 2 of 2) -35603 NM_005222 1750 Hs.249196 NM_005222 ENSG00000006377 DLX6 - distal-less homeobox 6 protein-coding chr9-4965 chr9 17866133 17866343 + 4.71 0.000 Intergenic Intergenic 287172 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr5-3540 chr5 28745357 28745567 + 4.71 0.000 Intergenic AluSp|SINE|Alu -181408 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo chr15-4564 chr15 57970065 57970275 + 4.71 0.000 intron (NM_170696, intron 6 of 11) intron (NM_170696, intron 6 of 11) 43853 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr2-5780 chr2 225040462 225040672 + 4.71 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) 1901 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chrX-4136 chrX 27773725 27773935 + 4.71 0.000 Intergenic Intergenic -34160 NM_182506 139422 Hs.447363 NM_182506 ENSG00000177689 MAGEB10 - MAGE family member B10 protein-coding chr8-6250 chr8 40794772 40794982 + 4.71 0.000 intron (NM_024645, intron 2 of 6) intron (NM_024645, intron 2 of 6) 102949 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr7-9083 chr7 105377852 105378062 + 4.71 0.000 intron (NM_001350746, intron 2 of 14) intron (NM_001350746, intron 2 of 14) 10964 NM_182692 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr21-1647 chr21 24518550 24518760 + 4.71 0.000 intron (NR_135519, intron 1 of 2) L1PA10|LINE|L1 89915 NR_135519 105372751 Hs.652040 NR_135519 ENSG00000237484 LINC01684 lnc-JAM2-6 long intergenic non-protein coding RNA 1684 ncRNA chrX-2897 chrX 149496099 149496309 + 4.71 0.000 intron (NR_104128, intron 6 of 8) intron (NR_104128, intron 6 of 8) 9102 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr9-5401 chr9 94108639 94108849 + 4.71 0.000 3' UTR (NM_001253830, exon 10 of 10) 3' UTR (NM_001253830, exon 10 of 10) 24280 NM_001253829 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding chr9-6349 chr9 14482558 14482768 + 4.71 0.000 intron (NM_001369458, intron 1 of 11) intron (NM_001369458, intron 1 of 11) 49414 NM_001369458 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr9-8144 chr9 102254823 102255033 + 4.71 0.000 Intergenic Intergenic -264709 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA chr22-2584 chr22 29386156 29386366 + 4.71 0.000 intron (NM_001166019, intron 1 of 20) MIRc|SINE|MIR 2309 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr1-15069 chr1 95853698 95853908 + 4.71 0.000 Intergenic MER52D|LTR|ERV1 -138265 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr13-4130 chr13 82163406 82163616 + 4.71 0.000 Intergenic L2|LINE|L2 -936528 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr20-3550 chr20 2594703 2594913 + 4.71 0.000 intron (NM_080751, intron 8 of 19) intron (NM_080751, intron 8 of 19) -57824 NR_027700 10528 Hs.376064 NM_006392 ENSG00000101361 NOP56 NOL5A|SCA36 NOP56 ribonucleoprotein protein-coding chr12-7191 chr12 49767316 49767526 + 4.71 0.000 Intergenic AluSz|SINE|Alu 25612 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding KI270733.1-19 KI270733.1 128463 128673 + 4.71 0.000 NA NA NA NA chr1-11813 chr1 28160614 28160824 + 4.71 0.000 intron (NM_001164722, intron 1 of 1) intron (NM_001164722, intron 1 of 1) 15971 NM_001164723 5724 Hs.77542 NM_000952 ENSG00000169403 PTAFR PAFR platelet activating factor receptor protein-coding chr6-4797 chr6 78174504 78174714 + 4.71 0.000 Intergenic L1M2a1|LINE|L1 364700 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr11-9427 chr11 60107930 60108140 + 4.71 0.000 Intergenic Harlequin-int|LTR|ERV1 19371 NM_001256916 2206 Hs.386748 NM_000139 ENSG00000149534 MS4A2 APY|ATOPY|FCER1B|FCERI|IGEL|IGER|IGHER|MS4A1 membrane spanning 4-domains A2 protein-coding chr5-3127 chr5 56815630 56815840 + 4.71 0.000 exon (NM_005921, exon 1 of 20) exon (NM_005921, exon 1 of 20) 186 NM_005921 4214 Hs.653654 NM_005921 ENSG00000095015 MAP3K1 MAPKKK1|MEKK|MEKK 1|MEKK1|SRXY6 mitogen-activated protein kinase kinase kinase 1 protein-coding chr3-7085 chr3 178625077 178625287 + 4.71 0.000 intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 66332 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr2-6925 chr2 109156361 109156571 + 4.71 0.000 intron (NM_001099289, intron 1 of 9) AluSq|SINE|Alu -14878 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chrX-3653 chrX 100222744 100222954 + 4.71 0.000 Intergenic Intergenic 187424 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr17-7985 chr17 48699584 48699794 + 4.71 0.000 Intergenic AluSz6|SINE|Alu 22829 NM_032391 84366 Hs.116467 NM_032391 ENSG00000159182 PRAC1 C17orf92|PRAC PRAC1 small nuclear protein protein-coding chr11-5130 chr11 133361837 133362047 + 4.71 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) 170559 NM_001319104 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr3-10818 chr3 162936732 162936942 + 4.71 0.000 Intergenic L2a|LINE|L2 366464 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr5-4708 chr5 40900623 40900833 + 4.71 0.000 Intergenic Intergenic -8769 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 - complement C7 protein-coding chrX-2059 chrX 19179734 19179944 + 4.71 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -57202 NM_001184836 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr11-8934 chr11 17736146 17736356 + 4.71 0.000 exon (NM_004976, exon 1 of 2) exon (NM_004976, exon 1 of 2) 303 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr8-6526 chr8 67376956 67377166 + 4.71 0.000 intron (NR_136224, intron 1 of 4) Tigger3b|DNA|TcMar-Tigger 33227 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr20-4216 chr20 47594521 47594731 + 4.71 0.000 intron (NM_181659, intron 2 of 22) AluSx1|SINE|Alu 92739 NM_001174088 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr21-938 chr21 41601618 41601828 + 4.71 0.000 Intergenic MIR3|SINE|MIR -77579 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chrX-5271 chrX 139722079 139722289 + 4.71 0.000 Intergenic Intergenic -13962 NM_001099855 4168 Hs.387262 NM_005369 ENSG00000101977 MCF2 ARHGEF21|DBL MCF.2 cell line derived transforming sequence protein-coding chr20-4115 chr20 41643508 41643718 + 4.71 0.000 Intergenic Intergenic -25236 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr4-6156 chr4 35123965 35124175 + 4.71 0.000 Intergenic L1PA15|LINE|L1 -854323 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr18-2985 chr18 23737146 23737356 + 4.71 0.000 intron (NM_001127717, intron 2 of 73) intron (NM_001127717, intron 2 of 73) 47798 NM_001127717 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr2-10198 chr2 98695862 98696072 + 4.71 0.000 intron (NM_012214, intron 2 of 15) AluSx|SINE|Alu -32494 NM_001160154 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding chr20-3743 chr20 18780551 18780761 + 4.71 0.000 Intergenic MER51B|LTR|ERV1 13326 NR_026884 29075 Hs.584899 NM_014162 LINC00652 HSPC072 long intergenic non-protein coding RNA 652 ncRNA chrY-24 chrY 11022806 11023016 + 4.71 0.000 Intergenic Intergenic 1112113 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 ncRNA chr21-1070 chr21 31709642 31709852 + 4.71 0.000 intron (NM_020706, intron 1 of 19) intron (NM_020706, intron 1 of 19) 22371 NM_001145445 57466 Hs.17255 NM_020706 ENSG00000156304 SCAF4 SFRS15|SRA4 SR-related CTD associated factor 4 protein-coding chr12-6402 chr12 73892888 73893098 + 4.71 0.000 Intergenic Intergenic 399638 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr11-10530 chr11 120050986 120051196 + 4.71 0.000 Intergenic AluSx|SINE|Alu 77762 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chrX-5289 chrX 141896842 141897052 + 4.71 0.000 exon (NM_138702, exon 7 of 8) exon (NM_138702, exon 7 of 8) 2281 NM_177456 139081 Hs.356870 NM_138702 ENSG00000165509 MAGEC3 CT7.2|HCA2|MAGE-C3|MAGEC4 MAGE family member C3 protein-coding chr15-3554 chr15 26247100 26247310 + 4.71 0.000 Intergenic AluY|SINE|Alu 131392 NR_038851 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr6-8536 chr6 160579169 160579379 + 4.71 0.000 intron (NM_005577, intron 26 of 38) Tigger16a|DNA|TcMar-Tigger -68150 NR_028092 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr17-5058 chr17 2821966 2822176 + 4.71 0.000 intron (NM_001330058, intron 2 of 24) intron (NM_001330058, intron 2 of 24) 25633 NM_001100398 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr6-6118 chr6 156600013 156600223 + 4.71 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -177737 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr10-4765 chr10 3828427 3828637 + 4.71 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -5418 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr2-9923 chr2 236564368 236564578 + 4.71 0.000 Intergenic MER51E|LTR|ERV1 -5352 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr9-6984 chr9 110008455 110008665 + 4.71 0.000 intron (NM_147150, intron 6 of 9) intron (NM_147150, intron 6 of 9) -40038 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr1-11643 chr1 247911606 247911816 + 4.71 0.000 Intergenic SATR1|Satellite|Satellite -9307 NM_001005522 343172 Hs.521114 NM_001005522 ENSG00000177462 OR2T8 OR2T8P olfactory receptor family 2 subfamily T member 8 protein-coding chr14-4394 chr14 29492190 29492400 + 4.71 0.000 Intergenic Intergenic 434801 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr15-2749 chr15 24750978 24751188 + 4.71 0.000 Intergenic Kanga1a|DNA|TcMar-Tc2 -72525 NM_001349460 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr4-4051 chr4 3214030 3214240 + 4.71 0.000 exon (NM_002111, exon 50 of 67) exon (NM_002111, exon 50 of 67) -30234 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr11-8874 chr11 14120402 14120612 + 4.71 0.000 intron (NM_006108, intron 5 of 15) intron (NM_006108, intron 5 of 15) 157784 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr2-14044 chr2 194992196 194992406 + 4.71 0.000 Intergenic Intergenic 261706 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr16-4586 chr16 67606601 67606811 + 4.71 0.000 intron (NM_001191022, intron 2 of 9) intron (NM_001191022, intron 2 of 9) 35933 NM_001363916 10664 Hs.368367 NM_006565 ENSG00000102974 CTCF MRD21 CCCTC-binding factor protein-coding chr1-15748 chr1 171939748 171939958 + 4.71 0.000 intron (NM_001278252, intron 2 of 14) intron (NM_001278252, intron 2 of 14) 75661 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 - DNM3 intronic transcript 1 ncRNA chr7-5186 chr7 8760092 8760302 + 4.71 0.000 Intergenic Intergenic 326588 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chrX-3275 chrX 98928361 98928571 + 4.71 0.000 Intergenic Intergenic -1363931 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr1-14547 chr1 52191389 52191599 + 4.71 0.000 intron (NM_007324, intron 1 of 17) intron (NM_007324, intron 1 of 17) 49400 NM_004799 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr11-10009 chr11 79900847 79901057 + 4.71 0.000 Intergenic L1MA4|LINE|L1 -459922 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr9-3381 chr9 128048581 128048791 + 4.71 0.000 Intergenic Intergenic 18634 NM_197956 203245 Hs.373606 NM_197956 ENSG00000171169 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding chr11-9396 chr11 57231027 57231237 + 4.71 0.000 Intergenic L2b|LINE|L2 6118 NR_027991 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr4-6187 chr4 44989839 44990049 + 4.71 0.000 Intergenic MER50-int|LTR|ERV1 -263310 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr8-4490 chr8 118861568 118861778 + 4.71 0.000 Intergenic Intergenic 90212 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding chr13-4138 chr13 83676123 83676333 + 4.71 0.000 Intergenic LTR13A|LTR|ERVK 206165 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr7-5988 chr7 102217402 102217612 + 4.71 0.000 intron (NM_001202543, intron 20 of 23) intron (NM_001202543, intron 20 of 23) -67634 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr11-5295 chr11 44695773 44695983 + 4.71 0.000 Intergenic MIRb|SINE|MIR -31084 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chrX-1704 chrX 17050999 17051209 + 4.71 0.000 intron (NM_001080975, intron 6 of 17) L1MA1|LINE|L1 104446 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr2-4760 chr2 19940089 19940299 + 4.71 0.000 intron (NM_001006657, intron 18 of 27) AluJb|SINE|Alu -38211 NM_001008237 130502 Hs.591547 NM_001008237 ENSG00000183891 TTC32 - tetratricopeptide repeat domain 32 protein-coding chr12-4023 chr12 41551041 41551251 + 4.71 0.000 intron (NM_001164595, intron 5 of 9) MLT1A0|LTR|ERVL-MaLR 113407 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr3-7682 chr3 41476208 41476418 + 4.71 0.000 intron (NR_136342, intron 30 of 34) intron (NR_136342, intron 30 of 34) 276808 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr6-4263 chr6 10123576 10123786 + 4.71 0.000 Intergenic AluSc|SINE|Alu -280821 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr20-4309 chr20 51444780 51444990 + 4.71 0.000 intron (NM_012340, intron 6 of 10) intron (NM_012340, intron 6 of 10) 8092 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr11-9497 chr11 62901825 62902035 + 4.71 0.000 Intergenic Intergenic 19433 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr4-4752 chr4 96064073 96064283 + 4.71 0.000 Intergenic L4_A_Mam|LINE|RTE-X 224085 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding chr11-8714 chr11 6629889 6630099 + 4.71 0.000 intron (NM_003737, intron 10 of 20) CpG -10572 NM_000391 1200 Hs.523454 NM_000391 ENSG00000166340 TPP1 CLN2|GIG1|LPIC|SCAR7|TPP-1 tripeptidyl peptidase 1 protein-coding chr17-6577 chr17 48252361 48252571 + 4.71 0.000 intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -41881 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr3-4675 chr3 45355389 45355599 + 4.71 0.000 Intergenic LTR101_Mam|LTR|ERVL -33082 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chrX-4378 chrX 50487038 50487248 + 4.71 0.000 Intergenic Intergenic -16318 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr3-10297 chr3 126059446 126059656 + 4.71 0.000 intron (NM_001164475, intron 1 of 9) MIRc|SINE|MIR -2776 NM_001008487 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chrX-4005 chrX 16125727 16125937 + 4.71 0.000 intron (NM_005314, intron 1 of 2) intron (NM_005314, intron 1 of 2) 2267 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr2-9927 chr2 238377025 238377235 + 4.71 0.000 intron (NM_001139490, intron 13 of 14) L1M5|LINE|L1 -49797 NM_001040445 51665 Hs.516788 NM_016114 ENSG00000065802 ASB1 ASB-1 ankyrin repeat and SOCS box containing 1 protein-coding chr19-6366 chr19 11958430 11958640 + 4.71 0.000 Intergenic Intergenic -6505 NM_001367174 284390 Hs.646386 NM_001012753 ENSG00000197054 ZNF763 ZNF|ZNF440L zinc finger protein 763 protein-coding chr4-7603 chr4 81793004 81793214 + 4.71 0.000 Intergenic MLT2C1|LTR|ERVL -321202 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr10-9088 chr10 125547700 125547910 + 4.71 0.000 Intergenic MIRb|SINE|MIR -26566 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr5-8820 chr5 150256116 150256326 + 4.71 0.000 intron (NM_001369025, intron 6 of 17) MIRb|SINE|MIR 33552 NM_001369025 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chrX-4976 chrX 116168843 116169053 + 4.71 0.000 Intergenic Intergenic -1796 NM_000686 186 Hs.405348 NM_000686 ENSG00000180772 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor type 2 protein-coding chr4-2504 chr4 24512055 24512265 + 4.71 0.000 Intergenic AluSx1|SINE|Alu 8130 NR_030299 693158 NR_030299 ENSG00000207697 MIR573 MIRN573|hsa-mir-573|mir-573 microRNA 573 ncRNA chr7-8841 chr7 87068795 87069005 + 4.71 0.000 Intergenic MLT2B1|LTR|ERVL -9246 NM_001142749 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr10-6796 chr10 8445177 8445387 + 4.71 0.000 Intergenic Intergenic 149109 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 - uncharacterized LOC105376398 ncRNA chr2-13656 chr2 161556178 161556388 + 4.71 0.000 Intergenic Intergenic -48381 NR_077058 285116 Hs.470435 NR_077058 AHCTF1P1 AHCTF1P|ELYS-like AT-hook containing transcription factor 1 pseudogene 1 pseudo chr5-5365 chr5 132631877 132632087 + 4.71 0.000 intron (NR_132124, intron 2 of 2) intron (NR_132124, intron 2 of 2) 9808 NR_132124 101927761 Hs.598812 NR_132124 ENSG00000223442 TH2LCRR TH2-LCR T helper type 2 locus control region associated RNA ncRNA chr3-8865 chr3 10214764 10214974 + 4.71 0.000 intron (NM_001570, intron 6 of 12) AluJb|SINE|Alu -33590 NM_014760 9797 Hs.475401 NM_014760 ENSG00000157014 TATDN2 - TatD DNase domain containing 2 protein-coding chr3-4002 chr3 58630021 58630231 + 4.71 0.000 intron (NR_134853, intron 2 of 3) intron (NR_134853, intron 2 of 3) -2516 NM_001282714 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr3-8914 chr3 12961339 12961549 + 4.71 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) 6286 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr1-11497 chr1 143750115 143750325 + 4.71 0.000 intron (NR_160531, intron 3 of 5) AluSz6|SINE|Alu 5385 NR_160530 105369140 NR_160528 LOC105369140 - NBPF member 6 pseudogene pseudo chr1-14372 chr1 43425341 43425551 + 4.71 0.000 intron (NM_015284, intron 18 of 70) intron (NM_015284, intron 18 of 70) -23093 NR_106793 102465440 NR_106793 ENSG00000274975 MIR6735 hsa-mir-6735 microRNA 6735 ncRNA chr3-8706 chr3 188186860 188187070 + 4.71 0.000 intron (NM_001167672, intron 1 of 9) HAL1ME|LINE|L1 8422 NR_024413 401105 Hs.679026 NM_207488 ENSG00000279891 FLJ42393 AVPC1948 uncharacterized LOC401105 ncRNA chr2-6274 chr2 48066863 48067073 + 4.71 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -161175 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr19-6462 chr19 17025146 17025356 + 4.71 0.000 intron (NM_015692, intron 1 of 41) AluSp|SINE|Alu 1559 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr10-7013 chr10 75905794 75906004 + 4.71 0.000 intron (NR_131178, intron 3 of 7) intron (NR_131178, intron 3 of 7) 123138 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr18-919 chr18 63358720 63358930 + 4.71 0.000 intron (NM_002035, intron 3 of 9) AluSx|SINE|Alu 8381 NM_002035 2531 Hs.74050 NM_002035 ENSG00000119537 KDSR DHSR|EKVP4|FVT1|SDR35C1 3-ketodihydrosphingosine reductase protein-coding chr2-11999 chr2 28003753 28003963 + 4.71 0.000 intron (NM_199193, intron 5 of 13) intron (NM_199193, intron 5 of 13) 7491 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA chr2-7270 chr2 234333343 234333553 + 4.71 0.000 Intergenic Intergenic 121147 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr18-2521 chr18 70681022 70681232 + 4.71 0.000 Intergenic AluSx1|SINE|Alu -30173 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA chr3-8734 chr3 196007429 196007639 + 4.71 0.000 Intergenic AluJb|SINE|Alu -17255 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr2-12141 chr2 37762348 37762558 + 4.71 0.000 Intergenic Intergenic 67258 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr18-2376 chr18 67960912 67961122 + 4.71 0.000 Intergenic Intergenic -146195 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA chr15-3474 chr15 94903427 94903637 + 4.71 0.000 Intergenic MER21C|LTR|ERVL 48169 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr15-4700 chr15 66605343 66605553 + 4.71 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) 23258 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr7-8150 chr7 28900613 28900823 + 4.71 0.000 Intergenic Intergenic 57612 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr5-7999 chr5 85739928 85740138 + 4.71 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -542411 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chrX-1269 chrX 107500717 107500927 + 4.71 0.000 Intergenic AluSx1|SINE|Alu -21628 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr11-10698 chr11 129694359 129694569 + 4.71 0.000 Intergenic Intergenic -77195 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr5-5375 chr5 133627048 133627258 + 4.71 0.000 Intergenic L1MD1|LINE|L1 -14612 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr2-8180 chr2 87463719 87463929 + 4.71 0.000 intron (NR_024206, intron 1 of 1) intron (NR_024206, intron 1 of 1) -6126 NR_146460 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr3-7203 chr3 190847557 190847767 + 4.71 0.000 Intergenic Intergenic 15032 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr3-11175 chr3 191896903 191897113 + 4.71 0.000 Intergenic HERVH-int|LTR|ERV1 -341622 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr2-13093 chr2 112291257 112291467 + 4.71 0.000 intron (NM_198581, intron 1 of 11) AluSx|SINE|Alu 15765 NM_198581 376940 Hs.190477 NM_198581 ENSG00000188177 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding chr22-3900 chr22 36022453 36022663 + 4.71 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) 5979 NM_001082579 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr18-1701 chr18 1010086 1010296 + 4.71 0.000 Intergenic Intergenic -82198 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA chr11-10697 chr11 129558060 129558270 + 4.71 0.000 Intergenic L1P4d|LINE|L1 59104 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr20-3174 chr20 44137178 44137388 + 4.71 0.000 intron (NM_020433, intron 2 of 5) intron (NM_020433, intron 2 of 5) 49905 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr8-6612 chr8 74645615 74645825 + 4.71 0.000 intron (NR_033830, intron 2 of 5) intron (NR_033830, intron 2 of 5) 45854 NR_033830 441355 Hs.647162 NR_033830 ENSG00000254349 MIR2052HG - MIR2052 host gene ncRNA chr10-9234 chr10 133068190 133068400 + 4.71 0.000 Intergenic Intergenic 18402 NR_111905 100128127 Hs.694139 NR_111905 ADGRA1-AS1 GPR123-AS1 adhesion G protein-coupled receptor A1 antisense RNA 1 ncRNA chr10-7377 chr10 2756627 2756837 + 4.71 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -255270 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr12-7105 chr12 45446050 45446260 + 4.71 0.000 Intergenic L1PB1|LINE|L1 153465 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr20-2625 chr20 41837184 41837394 + 4.71 0.000 Intergenic MER5A|DNA|hAT-Charlie -218912 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr12-4031 chr12 45130934 45131144 + 4.71 0.000 Intergenic Intergenic -65628 NR_026583 83956 Hs.650500 NM_032032 RACGAP1P FKSG42 Rac GTPase activating protein 1 pseudogene pseudo chr1-12057 chr1 116889116 116889326 + 4.71 0.000 Intergenic AluSz|SINE|Alu -20695 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr17-6524 chr17 34143136 34143346 + 4.71 0.000 intron (NM_001094, intron 1 of 9) MIRc|SINE|MIR 13565 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr18-2788 chr18 2985899 2986109 + 4.71 0.000 intron (NM_014646, intron 1 of 19) intron (NM_014646, intron 1 of 19) 25943 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr10-8803 chr10 107666040 107666250 + 4.71 0.000 Intergenic Intergenic 403148 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr2-13462 chr2 146216179 146216389 + 4.71 0.000 Intergenic L1MEf|LINE|L1 -370773 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr9-7408 chr9 20921539 20921749 + 4.71 0.000 intron (NM_017794, intron 26 of 45) intron (NM_017794, intron 26 of 45) 109996 NM_001010915 401494 Hs.716678 NM_001010915 ENSG00000188921 HACD4 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 protein-coding chr16-6307 chr16 47905846 47906056 + 4.71 0.000 intron (NR_110650, intron 4 of 5) intron (NR_110650, intron 4 of 5) -18821 NR_110649 100507534 Hs.407601 NR_110649 ENSG00000261325 LINC02192 - long intergenic non-protein coding RNA 2192 ncRNA chr1-13201 chr1 208374644 208374854 + 4.71 0.000 Intergenic Intergenic -130365 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr6-3417 chr6 108189962 108190172 + 4.71 0.000 Intergenic Intergenic 22044 NM_001286102 7101 Hs.157688 NM_003269 ENSG00000112333 NR2E1 TLL|TLX|XTLL nuclear receptor subfamily 2 group E member 1 protein-coding chr3-4565 chr3 161505140 161505350 + 4.71 0.000 Intergenic Intergenic 8437 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr10-9034 chr10 123345225 123345435 + 4.71 0.000 Intergenic Intergenic 190928 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr3-4425 chr3 12607851 12608061 + 4.71 0.000 intron (NR_148942, intron 5 of 16) AluSc|SINE|Alu 50869 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr8-5651 chr8 110376331 110376541 + 4.71 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -400665 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr9-7891 chr9 88033050 88033260 + 4.71 0.000 Intergenic Intergenic 44745 NR_135137 102724156 Hs.633031 NR_135137 LOC102724156 - uncharacterized LOC102724156 ncRNA chr1-15850 chr1 181309581 181309791 + 4.71 0.000 Intergenic Intergenic 73298 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr14-3817 chr14 70661131 70661341 + 4.71 0.000 intron (NM_015351, intron 1 of 2) MLT1C|LTR|ERVL-MaLR 19320 NM_015351 23508 Hs.79170 NM_015351 ENSG00000133985 TTC9 TTC9A tetratricopeptide repeat domain 9 protein-coding chr15-4444 chr15 46086870 46087080 + 4.71 0.000 Intergenic L1MEh|LINE|L1 381780 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr4-6741 chr4 5066635 5066845 + 4.71 0.000 intron (NM_001306082, intron 1 of 12) L2b|LINE|L2 15260 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr4-7929 chr4 108412332 108412542 + 4.71 0.000 Intergenic L1M2a|LINE|L1 -144796 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chr5-6052 chr5 177709085 177709295 + 4.71 0.000 Intergenic Intergenic -36913 NR_026921 202181 Hs.189914 NR_026921 LOC202181 - SUMO interacting motifs containing 1 pseudogene pseudo chr1-15690 chr1 167789680 167789890 + 4.71 0.000 3' UTR (NM_003953, exon 6 of 6) 3' UTR (NM_003953, exon 6 of 6) 67803 NM_001146191 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr2-6545 chr2 214098720 214098930 + 4.71 0.000 intron (NR_047660, intron 12 of 14) intron (NR_047660, intron 12 of 14) -312229 NM_001080500 402117 Hs.534834 NM_001080500 ENSG00000174453 VWC2L - von Willebrand factor C domain containing 2 like protein-coding chr17-7067 chr17 65001815 65002025 + 4.71 0.000 Intergenic AluSx|SINE|Alu -26335 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo chr11-10286 chr11 104970350 104970560 + 4.71 0.000 Intergenic L1PA10|LINE|L1 -1881 NM_001225 837 Hs.138378 NM_001225 ENSG00000196954 CASP4 ICE(rel)II|ICEREL-II|ICH-2|Mih1|Mih1/TX|TX caspase 4 protein-coding chr7-7420 chr7 75764758 75764968 + 4.71 0.000 Intergenic LTR16C|LTR|ERVL 24883 NM_006072 10344 Hs.131342 NM_006072 ENSG00000006606 CCL26 IMAC|MIP-4a|MIP-4alpha|SCYA26|TSC-1 C-C motif chemokine ligand 26 protein-coding chr4-6866 chr4 10159381 10159591 + 4.71 0.000 Intergenic Intergenic -42687 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr5-8053 chr5 92286270 92286480 + 4.71 0.000 Intergenic L1PA13|LINE|L1 -903058 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr7-8900 chr7 92969979 92970189 + 4.71 0.000 Intergenic Intergenic -133457 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chrX-5348 chrX 148722769 148722979 + 4.71 0.000 intron (NM_001170628, intron 1 of 17) L2c|LINE|L2 3783 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr11-10381 chr11 112654952 112655162 + 4.71 0.000 Intergenic Intergenic -99255 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr3-6382 chr3 89700808 89701018 + 4.71 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 593292 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr4-8759 chr4 187138817 187139027 + 4.71 0.000 Intergenic MamRep1879|DNA|hAT-Tip100? -63064 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr5-9214 chr5 181043426 181043636 + 4.71 0.000 promoter-TSS (NR_107056) promoter-TSS (NR_107056) -47 NR_107056 102465882 NR_107056 ENSG00000277912 MIR8089 hsa-mir-8089 microRNA 8089 ncRNA chr10-9097 chr10 126338223 126338433 + 4.71 0.000 intron (NM_001288974, intron 1 of 18) AluYa5|SINE|Alu 50149 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr6-5654 chr6 85795270 85795480 + 4.71 0.000 Intergenic Intergenic -116642 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr18-2555 chr18 3367426 3367636 + 4.71 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -16972 NR_146506 105371964 Hs.105326 NR_146506 ENSG00000259256 LINC01895 - long intergenic non-protein coding RNA 1895 ncRNA chr8-7060 chr8 115504794 115505004 + 4.71 0.000 intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 163114 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr10-8182 chr10 71461847 71462057 + 4.71 0.000 intron (NM_052836, intron 3 of 12) intron (NM_052836, intron 3 of 12) 49968 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr1-14201 chr1 34490967 34491177 + 4.71 0.000 Intergenic L1PA11|LINE|L1 178622 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr6-3470 chr6 2630701 2630911 + 4.71 0.000 intron (NR_131168, intron 2 of 2) UCON2|DNA?|DNA? -3694 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr2-13345 chr2 134460648 134460858 + 4.71 0.000 intron (NM_030923, intron 6 of 7) intron (NM_030923, intron 6 of 7) 206681 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr14-2307 chr14 74294413 74294623 + 4.71 0.000 intron (NM_001353594, intron 5 of 15) intron (NM_001353594, intron 5 of 15) 8416 NM_001353603 5826 Hs.94395 NM_005050 ENSG00000119688 ABCD4 ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L ATP binding cassette subfamily D member 4 protein-coding chrX-4094 chrX 23702452 23702662 + 4.71 0.000 3' UTR (NM_001033583, exon 15 of 15) 3' UTR (NM_001033583, exon 15 of 15) 35064 NM_006406 10549 Hs.83383 NM_006406 ENSG00000123131 PRDX4 AOE37-2|AOE372|HEL-S-97n|PRX-4 peroxiredoxin 4 protein-coding chr10-8778 chr10 105251193 105251403 + 4.71 0.000 intron (NM_014978, intron 22 of 26) THE1C|LTR|ERVL-MaLR 569035 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr2-12072 chr2 32075457 32075667 + 4.71 0.000 intron (NM_001363875, intron 1 of 15) AluSz|SINE|Alu 11951 NM_199436 6683 Hs.468091 NM_014946 ENSG00000021574 SPAST ADPSP|FSP2|SPG4 spastin protein-coding chr3-9764 chr3 69866872 69867082 + 4.71 0.000 intron (NM_198177, intron 1 of 9) intron (NM_198177, intron 1 of 9) 753 NM_198177 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr17-8605 chr17 80883977 80884187 + 4.71 0.000 intron (NM_020761, intron 16 of 33) intron (NM_020761, intron 16 of 33) -78450 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr2-12233 chr2 43831888 43832098 + 4.71 0.000 exon (NM_022436, exon 3 of 13) exon (NM_022436, exon 3 of 13) 6846 NM_022436 64240 Hs.132992 NM_022436 ENSG00000138075 ABCG5 STSL ATP binding cassette subfamily G member 5 protein-coding chr4-4730 chr4 92774434 92774644 + 4.71 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 470140 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr1-11940 chr1 63635695 63635905 + 4.71 0.000 intron (NM_001172818, intron 5 of 10) intron (NM_001172818, intron 5 of 10) 12584 NM_001172818 5236 Hs.1869 NM_002633 ENSG00000079739 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding chr5-4255 chr5 138386105 138386315 + 4.71 0.000 exon (NM_016604, exon 7 of 24) exon (NM_016604, exon 7 of 24) 33525 NM_016604 51780 Hs.483486 NM_016604 ENSG00000120733 KDM3B 5qNCA|C5orf7|JMJD1B|NET22 lysine demethylase 3B protein-coding chr2-10687 chr2 25005913 25006123 + 4.71 0.000 intron (NR_034113, intron 2 of 2) AluY|SINE|Alu 33906 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 - DNAJC27 antisense RNA 1 ncRNA chr5-8267 chr5 112562996 112563206 + 4.71 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -65335 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr21-1872 chr21 42699143 42699353 + 4.71 0.000 intron (NM_001001578, intron 3 of 16) intron (NM_001001578, intron 3 of 16) 45496 NM_001001585 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr5-6514 chr5 3010405 3010615 + 4.71 0.000 Intergenic Intergenic 92656 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA chr11-9118 chr11 33097065 33097275 + 4.71 0.000 intron (NM_001326, intron 13 of 20) L1MB7|LINE|L1 21020 NR_015451 283267 Hs.533701 NR_015451 ENSG00000280798 LINC00294 NCRNA00294 long intergenic non-protein coding RNA 294 ncRNA chr1-14258 chr1 36828143 36828353 + 4.71 0.000 intron (NM_000831, intron 10 of 15) L3|LINE|CR1 206267 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr4-6952 chr4 18668018 18668228 + 4.71 0.000 Intergenic Intergenic -646248 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr6-8320 chr6 145353230 145353440 + 4.71 0.000 Intergenic Intergenic 333542 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chrX-1127 chrX 26792212 26792422 + 4.71 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 233980 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr2-9844 chr2 167966239 167966449 + 4.71 0.000 intron (NM_013233, intron 16 of 17) intron (NM_013233, intron 16 of 17) -25200 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr15-4724 chr15 67806219 67806429 + 4.71 0.000 intron (NM_001206804, intron 21 of 21) intron (NM_001206804, intron 21 of 21) -19185 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr6-7625 chr6 78629489 78629699 + 4.71 0.000 Intergenic L1PREC2|LINE|L1 -90285 NR_162115 113218491 NR_162115 MIR10524 - microRNA 10524 ncRNA chr1-10837 chr1 204119203 204119413 + 4.71 0.000 intron (NM_005686, intron 7 of 13) MLT1A0|LTR|ERVL-MaLR -22100 NR_123739 101929441 Hs.736889 NR_123739 ENSG00000230550 ERLNC1 ElncRNA1|TC0101441 estrogen receptor responsive lncRNA 1 ncRNA chr1-9160 chr1 19813612 19813822 + 4.71 0.000 TTS (NM_019062) TTS (NM_019062) 1566 NM_019062 54546 Hs.124835 NM_019062 ENSG00000178828 RNF186 - ring finger protein 186 protein-coding chr20-3433 chr20 46186093 46186303 + 4.71 0.000 intron (NM_021248, intron 10 of 11) AluJb|SINE|Alu 67884 NM_001362758 958 Hs.472860 NM_001250 ENSG00000101017 CD40 Bp50|CDW40|TNFRSF5|p50 CD40 molecule protein-coding chr12-5933 chr12 74585700 74585910 + 4.71 0.000 Intergenic AluJr|SINE|Alu 47970 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr13-3896 chr13 53593977 53594187 + 4.71 0.000 Intergenic LTR12|LTR|ERV1 -221337 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr3-9908 chr3 86050340 86050550 + 4.71 0.000 intron (NM_001256502, intron 9 of 10) MSTA-int|LTR|ERVL-MaLR -222395 NR_046752 100874037 Hs.570566 NR_046752 ENSG00000241648 CADM2-AS2 - CADM2 antisense RNA 2 ncRNA chr16-6901 chr16 84865495 84865705 + 4.71 0.000 intron (NM_031476, intron 6 of 14) intron (NM_031476, intron 6 of 14) 45615 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr15-4236 chr15 33126635 33126845 + 4.71 0.000 intron (NM_001277313, intron 4 of 20) intron (NM_001277313, intron 4 of 20) -58566 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr1-14309 chr1 39279690 39279900 + 4.71 0.000 intron (NM_012090, intron 5 of 92) MIRb|SINE|MIR -129278 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chrX-3198 chrX 45793345 45793555 + 4.71 0.000 Intergenic L1MEf|LINE|L1 -46326 NR_029636 407007 NR_029636 ENSG00000207725 MIR222 MIRN222|miRNA222|mir-222 microRNA 222 ncRNA chr8-7354 chr8 135722041 135722251 + 4.71 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 264690 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr11-7627 chr11 57278077 57278287 + 4.71 0.000 Intergenic Intergenic -40729 NM_005161 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr2-11093 chr2 127253916 127254126 + 4.71 0.000 Intergenic L1M5|LINE|L1 -33722 NM_001367501 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr15-4839 chr15 73860302 73860512 + 4.71 0.000 Intergenic MIRb|SINE|MIR -13157 NM_001286434 161514 Hs.124512 NM_153356 ENSG00000167139 TBC1D21 MgcRabGAP TBC1 domain family member 21 protein-coding chr2-7476 chr2 16012250 16012460 + 4.71 0.000 Intergenic AluJr|SINE|Alu -38072 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA chr18-3345 chr18 57345531 57345741 + 4.71 0.000 Intergenic Intergenic -6921 NM_015879 51046 Hs.23172 NM_015879 ENSG00000177511 ST8SIA3 SIAT8C|ST8SiaIII ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 protein-coding chr1-14014 chr1 26367400 26367610 + 4.71 0.000 intron (NM_001114759, intron 3 of 5) intron (NM_001114759, intron 3 of 5) 5289 NM_001114759 257101 Hs.353208 NM_173574 ENSG00000176083 ZNF683 Hobit zinc finger protein 683 protein-coding chrX-4991 chrX 117623252 117623462 + 4.71 0.000 Intergenic L1PA7|LINE|L1 350381 NM_033495 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chr10-7701 chr10 29988150 29988360 + 4.71 0.000 Intergenic Intergenic 71331 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr3-9972 chr3 96925183 96925393 + 4.71 0.000 intron (NM_001080448, intron 2 of 17) L1PA11|LINE|L1 110694 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr22-3025 chr22 26541128 26541338 + 4.71 0.000 exon (NM_001362922, exon 2 of 6) exon (NM_001362922, exon 2 of 6) 14090 NR_031615 100313914 NR_031615 ENSG00000221760 MIR548J MIRN548J|hsa-mir-548j microRNA 548j ncRNA chr8-6153 chr8 31253799 31254009 + 4.71 0.000 Intergenic Intergenic -220548 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chrX-3083 chrX 128670262 128670472 + 4.71 0.000 Intergenic L1PA7|LINE|L1 -617964 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr10-3721 chr10 113618099 113618309 + 4.71 0.000 intron (NM_001322945, intron 24 of 40) intron (NM_001322945, intron 24 of 40) 45837 NM_198060 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr11-10319 chr11 109095364 109095574 + 4.71 0.000 Intergenic LTR80B|LTR|ERVL -326721 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr14-4170 chr14 78802065 78802275 + 4.71 0.000 intron (NR_073547, intron 8 of 20) intron (NR_073547, intron 8 of 20) -397812 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chrX-5098 chrX 127816335 127816545 + 4.71 0.000 Intergenic LTR17|LTR|ERV1 235963 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr20-4249 chr20 48747276 48747486 + 4.71 0.000 intron (NM_020820, intron 2 of 39) intron (NM_020820, intron 2 of 39) 80618 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr16-6529 chr16 63040632 63040842 + 4.71 0.000 Intergenic L2a|LINE|L2 -1004299 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chrX-3037 chrX 87028788 87028998 + 4.71 0.000 Intergenic L1M1|LINE|L1 -488909 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr8-3740 chr8 22264775 22264985 + 4.71 0.000 intron (NR_134293, intron 1 of 1) HERVL40-int|LTR|ERVL 10282 NR_134293 100507071 Hs.458623 NR_134293 ENSG00000254064 LOC100507071 - uncharacterized LOC100507071 ncRNA chr1-9855 chr1 65003309 65003519 + 4.71 0.000 promoter-TSS (NR_119383) promoter-TSS (NR_119383) -938 NR_119383 101927084 Hs.734218 NR_119383 ENSG00000226891 LINC01359 - long intergenic non-protein coding RNA 1359 ncRNA chr3-8238 chr3 49076257 49076467 + 4.71 0.000 intron (NM_017730, intron 3 of 10) LSU-rRNA_Hsa|rRNA|rRNA 17270 NM_001320582 54870 Hs.297389 NM_017730 ENSG00000198218 QRICH1 AB-DIP|VERBRAS glutamine rich 1 protein-coding chr1-16620 chr1 238844022 238844232 + 4.71 0.000 Intergenic L1PA10|LINE|L1 -358110 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr6-6274 chr6 36219058 36219268 + 4.71 0.000 intron (NM_015695, intron 9 of 12) intron (NM_015695, intron 9 of 12) 22419 NM_015695 27154 Hs.520096 NM_015695 ENSG00000096070 BRPF3 - bromodomain and PHD finger containing 3 protein-coding chrX-3135 chrX 14016747 14016957 + 4.71 0.000 intron (NM_017856, intron 4 of 4) AluSx1|SINE|Alu 13040 NM_017856 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chrX-3629 chrX 90887185 90887395 + 4.71 0.000 Intergenic MER57-int|LTR|ERV1 -547549 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr1-15115 chr1 101551172 101551382 + 4.71 0.000 Intergenic Intergenic 227440 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr10-7553 chr10 15606266 15606476 + 4.71 0.000 exon (NM_003638, exon 18 of 30) exon (NM_003638, exon 18 of 30) 113551 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr13-3936 chr13 59616689 59616899 + 4.71 0.000 Intergenic L1M2c|LINE|L1 -395924 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr7-8743 chr7 76875956 76876166 + 4.71 0.000 Intergenic L2a|LINE|L2 -104761 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr13-4187 chr13 90042560 90042770 + 4.71 0.000 Intergenic L2|LINE|L2 77052 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr4-1828 chr4 88316353 88316563 + 4.71 0.000 intron (NR_134238, intron 2 of 4) intron (NR_134238, intron 2 of 4) 31528 NR_134237 105369192 Hs.733660 NR_134236 ENSG00000246375 PPM1K-DT - PPM1K divergent transcript ncRNA chr11-7208 chr11 133988626 133988836 + 4.71 0.000 Intergenic Intergenic -31935 NM_001277285 22997 Hs.204121 NM_014987 ENSG00000080854 IGSF9B - immunoglobulin superfamily member 9B protein-coding chr3-11072 chr3 184412265 184412475 + 4.71 0.000 intron (NR_161198, intron 1 of 2) MLT2B2|LTR|ERVL 10833 NR_161199 105374250 Hs.129464 NR_161198 LINC02054 - long intergenic non-protein coding RNA 2054 ncRNA chr2-13424 chr2 142418890 142419100 + 4.71 0.000 Intergenic Intergenic -287294 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr15-5263 chr15 98890370 98890580 + 4.71 0.000 intron (NM_000875, intron 2 of 20) MER41A|LTR|ERV1 106049 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr6-7972 chr6 113570627 113570837 + 4.71 0.000 Intergenic Kanga1d|DNA|TcMar-Tc2 79343 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chr5-6520 chr5 4721429 4721639 + 4.71 0.000 Intergenic THE1B|LTR|ERVL-MaLR -51947 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA chr17-6641 chr17 66420951 66421161 + 4.71 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -4202 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr1-14328 chr1 39914740 39914950 + 4.71 0.000 Intergenic AluSq2|SINE|Alu -12928 NM_005376 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 MYCL proto-oncogene, bHLH transcription factor protein-coding chr3-5954 chr3 46065977 46066187 + 4.71 0.000 Intergenic Intergenic -38599 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr15-3119 chr15 65250222 65250432 + 4.71 0.000 Intergenic AluSz|SINE|Alu 35264 NR_145768 109617003 NR_145768 ENSG00000206903 SNORA24B - small nucleolar RNA, H/ACA box 24B snoRNA chr17-7159 chr17 78581869 78582079 + 4.71 0.000 Intergenic AluSx1|SINE|Alu -4580 NM_173628 8632 Hs.375975 NM_003727 ENSG00000187775 DNAH17 DNAHL1|DNEL2 dynein axonemal heavy chain 17 protein-coding chr2-10216 chr2 104844301 104844511 + 4.71 0.000 intron (NR_037883, intron 1 of 3) CpG 7070 NR_037883 100506421 Hs.437281 NR_037883 ENSG00000233639 PANTR1 LINC01158|linc-Brn1a|linc-POU3F3 POU3F3 adjacent non-coding transcript 1 ncRNA chr9-7612 chr9 37499153 37499363 + 4.71 0.000 intron (NM_001282766, intron 10 of 12) AluJr4|SINE|Alu 13310 NM_022490 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr3-10840 chr3 165411222 165411432 + 4.71 0.000 intron (NR_125764, intron 3 of 5) L1MC1|LINE|L1 204367 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr22-4158 chr22 45070140 45070350 + 4.71 0.000 Intergenic Intergenic -60240 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr4-4047 chr4 3113737 3113947 + 4.71 0.000 intron (NM_002111, intron 6 of 66) intron (NM_002111, intron 6 of 66) 39161 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr6-8388 chr6 150148126 150148336 + 4.71 0.000 intron (NM_030949, intron 1 of 3) MIR|SINE|MIR 5187 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr4-5859 chr4 120801555 120801765 + 4.71 0.000 intron (NM_001300824, intron 7 of 13) intron (NM_001300824, intron 7 of 13) 121206 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr14-1456 chr14 102758381 102758591 + 4.71 0.000 Intergenic AluY|SINE|Alu -18963 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr1-12200 chr1 202255056 202255266 + 4.71 0.000 intron (NM_001017404, intron 4 of 15) intron (NM_001017404, intron 4 of 15) 41006 NM_001017404 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr18-3023 chr18 26527955 26528165 + 4.71 0.000 intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) 20493 NM_001142730 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr3-8060 chr3 8001144 8001354 + 4.71 0.000 intron (NR_110131, intron 1 of 3) L2a|LINE|L2 15058 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr8-7191 chr8 124702143 124702353 + 4.71 0.000 intron (NM_001282971, intron 2 of 14) intron (NM_001282971, intron 2 of 14) 26225 NM_001363299 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr5-7370 chr5 20068187 20068397 + 4.71 0.000 intron (NM_001291956, intron 2 of 14) intron (NM_001291956, intron 2 of 14) -80092 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr3-8632 chr3 171564580 171564790 + 4.71 0.000 Intergenic Intergenic -104277 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr2-7878 chr2 53249272 53249482 + 4.71 0.000 Intergenic Intergenic -518406 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chrX-2495 chrX 89109917 89110127 + 4.71 0.000 Intergenic LTR1A2|LTR|ERV1 362797 NM_001184771 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr3-10780 chr3 158557451 158557661 + 4.71 0.000 intron (NR_104147, intron 3 of 4) MLT1G|LTR|ERVL-MaLR 13510 NR_104147 100996447 Hs.369810 NR_104147 ENSG00000243150 LOC100996447 - uncharacterized LOC100996447 ncRNA chr2-9469 chr2 235215558 235215768 + 4.71 0.000 Intergenic Intergenic 187928 NM_001371306 chr6-7205 chr6 39578171 39578381 + 4.71 0.000 intron (NM_001289020, intron 9 of 21) intron (NM_001289020, intron 9 of 21) -146886 NM_001289024 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr21-1659 chr21 26123842 26124052 + 4.71 0.000 intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) 16443 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr8-6946 chr8 104873552 104873762 + 4.71 0.000 Intergenic Intergenic -284633 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr22-4096 chr22 43372078 43372288 + 4.71 0.000 Intergenic THE1B|LTR|ERVL-MaLR -28148 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr14-3848 chr14 76301656 76301866 + 4.71 0.000 Intergenic AluSq2|SINE|Alu -69586 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr7-8054 chr7 22457872 22458082 + 4.71 0.000 intron (NM_001164460, intron 4 of 4) intron (NM_001164460, intron 4 of 4) 42305 NM_001164460 256227 Hs.729825 NM_207342 ENSG00000105889 STEAP1B - STEAP family member 1B protein-coding chr14-5219 chr14 96594712 96594922 + 4.71 0.000 Intergenic Intergenic 91952 NM_001293628 10914 Hs.253726 NM_032632 ENSG00000090060 PAPOLA PAP|PAP-alpha poly(A) polymerase alpha protein-coding chr6-5651 chr6 82434800 82435010 + 4.71 0.000 Intergenic Intergenic 70661 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr16-5313 chr16 73293527 73293737 + 4.71 0.000 Intergenic MamRep605|LTR?|LTR? -93173 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr3-8542 chr3 144029236 144029446 + 4.71 0.000 Intergenic Intergenic 56260 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr19-4899 chr19 41203496 41203706 + 4.71 0.000 exon (NM_030622, exon 7 of 9) exon (NM_030622, exon 7 of 9) 10382 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr13-4103 chr13 79224759 79224969 + 4.71 0.000 Intergenic G-rich|Low_complexity|Low_complexity 181357 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr17-6451 chr17 14356492 14356702 + 4.71 0.000 Intergenic Intergenic 52857 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr1-16091 chr1 203287323 203287533 + 4.71 0.000 promoter-TSS (NR_117098) promoter-TSS (NR_117098) -272 NR_117098 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr1-15939 chr1 187928810 187929020 + 4.71 0.000 Intergenic Intergenic 485287 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr1-16296 chr1 215057640 215057850 + 4.71 0.000 intron (NM_001017424, intron 1 of 6) MIRb|SINE|MIR -24992 NM_014217 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr4-3560 chr4 190081957 190082167 + 4.71 0.000 Intergenic CpG 16833 NM_001293798 100288687 Hs.728749 NM_001205218 ENSG00000260596 DUX4 DUX4L double homeobox 4 protein-coding chr18-1315 chr18 74251531 74251741 + 4.71 0.000 3' UTR (NM_001914, exon 6 of 6) 3' UTR (NM_001914, exon 6 of 6) 40327 NM_001190807 1528 Hs.465413 NM_001914 ENSG00000166347 CYB5A CYB5|MCB5|METAG cytochrome b5 type A protein-coding chr2-12159 chr2 38616326 38616536 + 4.71 0.000 Intergenic Intergenic -13395 NM_001142650 92906 Hs.445497 NM_138394 ENSG00000143889 HNRNPLL HNRPLL|SRRF heterogeneous nuclear ribonucleoprotein L like protein-coding chr21-1020 chr21 20580880 20581090 + 4.71 0.000 Intergenic LTR47A|LTR|ERVL 222123 NR_109786 387486 Hs.576551 NR_024090 ENSG00000224924 LINC00320 C21orf131|NCRNA00320|PRED14 long intergenic non-protein coding RNA 320 ncRNA chrX-4166 chrX 31943947 31944157 + 4.71 0.000 intron (NM_000109, intron 45 of 78) intron (NM_000109, intron 45 of 78) 211417 NM_004013 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr7-8041 chr7 20800251 20800461 + 4.71 0.000 Intergenic Intergenic -13470 NM_198956 221833 Hs.195922 NM_182700 ENSG00000164651 SP8 BTD Sp8 transcription factor protein-coding chr15-4506 chr15 52162176 52162386 + 4.71 0.000 intron (NM_006578, intron 1 of 10) intron (NM_006578, intron 1 of 10) 17644 NM_006578 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr6-7228 chr6 40665391 40665601 + 4.71 0.000 Intergenic Intergenic -78132 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr14-4032 chr14 52110364 52110574 + 4.71 0.000 Intergenic L1MB7|LINE|L1 -41410 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr9-7930 chr9 89733239 89733449 + 4.71 0.000 Intergenic Intergenic 93561 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr15-5071 chr15 85819316 85819526 + 4.71 0.000 Intergenic AluSz|SINE|Alu -6214 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr8-6259 chr8 41324860 41325070 + 4.71 0.000 Intergenic Intergenic -15492 NM_003012 6422 Hs.213424 NM_003012 ENSG00000104332 SFRP1 FRP|FRP-1|FRP1|FrzA|SARP2 secreted frizzled related protein 1 protein-coding chr14-4843 chr14 69573264 69573474 + 4.71 0.000 exon (NM_001271507, exon 2 of 2) exon (NM_001271507, exon 2 of 2) 1502 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr17-7884 chr17 43107026 43107236 + 4.71 0.000 intron (NM_007297, intron 2 of 21) AluYj4|SINE|Alu 16984 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding chr13-1903 chr13 49319855 49320065 + 4.71 0.000 intron (NM_001079670, intron 10 of 10) intron (NM_001079670, intron 10 of 10) 72035 NM_030911 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr10-8388 chr10 82317177 82317387 + 4.71 0.000 intron (NM_001370082, intron 3 of 10) intron (NM_001370082, intron 3 of 10) -84362 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr12-7879 chr12 105953679 105953889 + 4.71 0.000 Intergenic Intergenic 186249 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr4-7370 chr4 60318901 60319111 + 4.71 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -603613 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr4-3939 chr4 167688919 167689129 + 4.71 0.000 Intergenic Intergenic -403513 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr3-8658 chr3 177926668 177926878 + 4.71 0.000 Intergenic AluSq|SINE|Alu 109908 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr1-15048 chr1 94340381 94340591 + 4.71 0.000 Intergenic Intergenic -77891 NM_001122674 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr10-8741 chr10 103612485 103612695 + 4.71 0.000 intron (NM_001365079, intron 6 of 8) intron (NM_001365079, intron 6 of 8) 65625 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-11570 chr2 908752 908962 + 4.71 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -3406 NR_110179 101060385 Hs.385965 NR_110179 ENSG00000228799 LINC01939 - long intergenic non-protein coding RNA 1939 ncRNA chr3-7718 chr3 50082424 50082634 + 4.71 0.000 Intergenic LTR32|LTR|ERVL -6390 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr11-10441 chr11 116639793 116640003 + 4.71 0.000 intron (NR_135069, intron 1 of 2) L1MA10|LINE|L1 476 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr10-4948 chr10 27198263 27198473 + 4.71 0.000 intron (NM_001271512, intron 11 of 11) intron (NM_001271512, intron 11 of 11) 42118 NM_001301252 91452 Hs.530597 NM_145698 ENSG00000107897 ACBD5 - acyl-CoA binding domain containing 5 protein-coding chr7-4167 chr7 103395432 103395642 + 4.71 0.000 intron (NR_135802, intron 9 of 17) AluSq4|SINE|Alu 47674 NR_120441 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr5-6024 chr5 157452073 157452283 + 4.71 0.000 intron (NR_136204, intron 1 of 3) Charlie15a|DNA|hAT-Charlie -7841 NM_001099287 348938 Hs.4285 NM_001099287 ENSG00000172548 NIPAL4 ARCI6|ICHTHYIN|ICHYN NIPA like domain containing 4 protein-coding chr1-8175 chr1 18854778 18854988 + 4.71 0.000 exon (NM_152232, exon 3 of 6) exon (NM_152232, exon 3 of 6) 4778 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chrX-3805 chrX 140150788 140150998 + 4.71 0.000 Intergenic AluSq2|SINE|Alu 59226 NM_001271560 389895 Hs.127679 NM_001271560 LOC389895 - chromosome 16 open reading frame 72-like protein-coding chr2-13274 chr2 127710468 127710678 + 4.71 0.000 intron (NM_018383, intron 18 of 21) intron (NM_018383, intron 18 of 21) 9076 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding chr15-4660 chr15 64685428 64685638 + 4.71 0.000 3' UTR (NM_015042, exon 9 of 9) 3' UTR (NM_015042, exon 9 of 9) 17748 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr6-8349 chr6 148223250 148223460 + 4.71 0.000 Intergenic MIR|SINE|MIR -48973 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr4-8439 chr4 154576858 154577068 + 4.71 0.000 Intergenic AluJb|SINE|Alu 13779 NM_000508 2243 Hs.351593 NM_000508 ENSG00000171560 FGA Fib2 fibrinogen alpha chain protein-coding chr12-7659 chr12 83547738 83547948 + 4.71 0.000 Intergenic L1PA6|LINE|L1 860688 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-7498 chr2 18704373 18704583 + 4.71 0.000 Intergenic HAL1|LINE|L1 -114898 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr5-8395 chr5 126042761 126042971 + 4.71 0.000 Intergenic MamRep605|LTR?|LTR? -136711 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr14-5410 chr14 104335040 104335250 + 4.71 0.000 Intergenic Intergenic 111561 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr3-8350 chr3 76929423 76929633 + 4.71 0.000 Intergenic L2a|LINE|L2 -110571 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr10-8248 chr10 74553605 74553815 + 4.71 0.000 intron (NM_001369123, intron 7 of 9) L1ME2|LINE|L1 -24386 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr17-3725 chr17 20716060 20716270 + 4.71 0.000 intron (NR_073509, intron 1 of 11) intron (NR_073509, intron 1 of 11) 3719 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr11-7128 chr11 125419009 125419219 + 4.71 0.000 intron (NM_022062, intron 10 of 12) intron (NM_022062, intron 10 of 12) -76100 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr4-2554 chr4 81622073 81622283 + 4.71 0.000 Intergenic Intergenic -150271 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr10-4748 chr10 2569863 2570073 + 4.71 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -68506 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr3-9070 chr3 26274987 26275197 + 4.71 0.000 Intergenic ERV24B_Prim-int|LTR|ERV1 -347714 NM_052953 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr13-4087 chr13 77583231 77583441 + 4.71 0.000 intron (NM_003843, intron 9 of 31) MIR3|SINE|MIR 23215 NR_126413 104355296 Hs.667682 NR_126412 ENSG00000224347 SCEL-AS1 - SCEL antisense RNA 1 ncRNA chr2-8932 chr2 185484259 185484469 + 4.71 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 254355 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr21-894 chr21 14985235 14985445 + 4.71 0.000 intron (NM_003489, intron 3 of 3) intron (NM_003489, intron 3 of 3) -66672 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA chr6-6971 chr6 18278791 18279001 + 4.71 0.000 Intergenic Intergenic -14366 NM_001134709 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr19-6616 chr19 29505459 29505669 + 4.71 0.000 intron (NR_040029, intron 1 of 9) intron (NR_040029, intron 1 of 9) 20188 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr20-4308 chr20 51434746 51434956 + 4.71 0.000 intron (NM_012340, intron 8 of 10) intron (NM_012340, intron 8 of 10) 18126 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr1-14855 chr1 78082611 78082821 + 4.71 0.000 intron (NM_001304725, intron 2 of 5) intron (NM_001304725, intron 2 of 5) 36750 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr13-3822 chr13 47137280 47137490 + 4.71 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -240309 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr8-4956 chr8 119393537 119393747 + 4.71 0.000 Intergenic AluSx|SINE|Alu -22804 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr4-3518 chr4 152287928 152288138 + 4.71 0.000 Intergenic Intergenic -49622 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr2-13200 chr2 121404540 121404750 + 4.71 0.000 intron (NM_015282, intron 25 of 38) intron (NM_015282, intron 25 of 38) -119443 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr7-8263 chr7 37556967 37557177 + 4.71 0.000 Intergenic MSTA|LTR|ERVL-MaLR -107746 NM_001206480 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr5-7843 chr5 68942460 68942670 + 4.71 0.000 Intergenic Intergenic 87362 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr22-3277 chr22 46787793 46788003 + 4.71 0.000 intron (NM_001284305, intron 1 of 12) intron (NM_001284305, intron 1 of 12) 13971 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr2-12856 chr2 96604200 96604410 + 4.71 0.000 exon (NM_001349260, exon 17 of 21) exon (NM_001349260, exon 17 of 21) 33686 NR_047658 55683 Hs.516341 NM_017991 ENSG00000114982 KANSL3 KIAA1310|NSL3|Rcd1 KAT8 regulatory NSL complex subunit 3 protein-coding chr1-11567 chr1 200425715 200425925 + 4.71 0.000 Intergenic Intergenic -15784 NM_001281294 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr14-3996 chr14 36293664 36293874 + 4.71 0.000 Intergenic Intergenic 26868 NM_001308110 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr8-7363 chr8 136479880 136480090 + 4.71 0.000 Intergenic Intergenic -50813 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr11-6003 chr11 21963940 21964150 + 4.71 0.000 Intergenic LTR29|LTR|ERV1 -229040 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr6-4985 chr6 107691297 107691507 + 4.71 0.000 Intergenic Intergenic 40748 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr17-8558 chr17 79870799 79871009 + 4.71 0.000 Intergenic Intergenic -31464 NM_003655 8535 Hs.405046 NM_003655 ENSG00000141582 CBX4 NBP16|PC2 chromobox 4 protein-coding chr8-6973 chr8 107429356 107429566 + 4.71 0.000 intron (NM_001199859, intron 1 of 8) intron (NM_001199859, intron 1 of 8) 68457 NM_001199859 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr18-2000 chr18 41712924 41713134 + 4.71 0.000 Intergenic Intergenic -192352 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr11-7015 chr11 117796779 117796989 + 4.71 0.000 intron (NM_001367905, intron 1 of 6) CpG 332 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr2-13389 chr2 138673482 138673692 + 4.71 0.000 intron (NM_007226, intron 1 of 1) L1MA4A|LINE|L1 106803 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chr22-4269 chr22 48839325 48839535 + 4.71 0.000 Intergenic L2b|LINE|L2 -27340 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr18-3194 chr18 45920231 45920441 + 4.71 0.000 intron (NM_020964, intron 16 of 43) L2c|LINE|L2 46993 NM_020964 57724 Hs.514843 NM_020964 ENSG00000152223 EPG5 HEEW1|KIAA1632|VICIS ectopic P-granules autophagy protein 5 homolog protein-coding chr4-8423 chr4 153181153 153181363 + 4.71 0.000 intron (NM_001130067, intron 1 of 11) MIR|SINE|MIR -23156 NM_001302693 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr4-5985 chr4 182851047 182851257 + 4.71 0.000 Intergenic Intergenic 66101 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr13-3912 chr13 55388375 55388585 + 4.71 0.000 Intergenic AluY|SINE|Alu 214026 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr9-7968 chr9 92163494 92163704 + 4.71 0.000 Intergenic LTR41B|LTR|ERVL 22132 NR_027341 158314 Hs.149940 NR_027341 LINC00475 C9orf44 long intergenic non-protein coding RNA 475 ncRNA chr2-12226 chr2 43406896 43407106 + 4.71 0.000 intron (NM_001083953, intron 28 of 37) intron (NM_001083953, intron 28 of 37) 179790 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr6-5990 chr6 95932014 95932224 + 4.71 0.000 Intergenic Intergenic -83855 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr10-6190 chr10 23765036 23765246 + 4.71 0.000 intron (NM_001098500, intron 1 of 18) intron (NM_001098500, intron 1 of 18) 70414 NM_001098500 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr5-6216 chr5 74736181 74736391 + 4.71 0.000 TTS (NM_170681) TTS (NM_170681) 30831 NR_104006 84340 Hs.277154 NM_032380 ENSG00000164347 GFM2 EF-G2mt|EFG2|MRRF2|MST027|MSTP027|RRF|RRF2|RRF2mt|hEFG2|mEF-G 2 G elongation factor mitochondrial 2 protein-coding chr11-10206 chr11 96947629 96947839 + 4.71 0.000 Intergenic L1MEc|LINE|L1 439309 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr20-3386 chr20 36876067 36876277 + 4.71 0.000 promoter-TSS (NM_080628) promoter-TSS (NM_080628) 34 NM_080628 140711 Hs.472630 NM_080628 ENSG00000101342 TLDC2 C20orf118 TBC/LysM-associated domain containing 2 protein-coding chr2-12369 chr2 51990471 51990681 + 4.71 0.000 intron (NR_135237, intron 7 of 10) intron (NR_135237, intron 7 of 10) -380072 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr3-6277 chr3 71830403 71830613 + 4.71 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -45360 NM_001126128 60675 Hs.528665 NM_021935 ENSG00000163421 PROK2 BV8|HH4|KAL4|MIT1|PK2 prokineticin 2 protein-coding chr12-7291 chr12 53136603 53136813 + 4.71 0.000 Intergenic AluSg4|SINE|Alu 27785 NM_001244706 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr17-4242 chr17 48779209 48779419 + 4.71 0.000 intron (NM_001130918, intron 13 of 15) AluSz6|SINE|Alu 15010 NM_173623 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr19-6319 chr19 10244652 10244862 + 4.71 0.000 Intergenic Intergenic -7207 NM_146387 51073 Hs.279652 NM_015956 ENSG00000105364 MRPL4 CGI-28|L4mt mitochondrial ribosomal protein L4 protein-coding chr9-7839 chr9 83503084 83503294 + 4.71 0.000 intron (NM_174938, intron 1 of 13) MLT1E2|LTR|ERVL-MaLR 35212 NM_001244959 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr4-7794 chr4 97130846 97131056 + 4.71 0.000 Intergenic Intergenic -235975 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chrX-4834 chrX 103054596 103054806 + 4.71 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 9470 NM_018476 55859 Hs.334370 NM_018476 ENSG00000133169 BEX1 BEX2|HBEX2|HGR74-h brain expressed X-linked 1 protein-coding chr3-11228 chr3 195304802 195305012 + 4.71 0.000 intron (NM_012287, intron 13 of 22) intron (NM_012287, intron 13 of 22) -33748 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr6-7618 chr6 77665859 77666069 + 4.71 0.000 intron (NM_001322247, intron 1 of 4) HERVH-int|LTR|ERV1 12925 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding chr17-8107 chr17 57022554 57022764 + 4.71 0.000 Intergenic MSTD|LTR|ERVL-MaLR -22819 NR_002818 376412 Hs.132299 NR_002818 ENSG00000261192 RNF126P1 - ring finger protein 126 pseudogene 1 pseudo chr16-5430 chr16 859348 859558 + 4.71 0.000 intron (NR_147885, intron 10 of 11) CpG 54010 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr14-3643 chr14 74312587 74312797 + 4.71 0.000 Intergenic AluJb|SINE|Alu -9758 NM_001353596 5826 Hs.94395 NM_005050 ENSG00000119688 ABCD4 ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L ATP binding cassette subfamily D member 4 protein-coding chr4-5533 chr4 113130944 113131154 + 4.71 0.000 intron (NM_001354237, intron 1 of 46) intron (NM_001354237, intron 1 of 46) 14352 NM_001354230 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr1-10935 chr1 211508864 211509074 + 4.71 0.000 Intergenic Intergenic -16052 NM_183059 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chrX-4532 chrX 67787918 67788128 + 4.71 0.000 Intergenic L2b|LINE|L2 243400 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr1-6904 chr1 147031797 147032007 + 4.71 0.000 intron (NR_024442, intron 1 of 5) intron (NR_024442, intron 1 of 5) 11137 NR_024442 728989 Hs.537068 NR_024442 LOC728989 - phosphodiesterase 4D interacting protein pseudogene pseudo chr15-4159 chr15 90598128 90598338 + 4.71 0.000 intron (NM_001042574, intron 3 of 14) intron (NM_001042574, intron 3 of 14) -62001 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr15-3951 chr15 41665376 41665586 + 4.71 0.000 intron (NM_001164273, intron 1 of 23) AluJb|SINE|Alu 5069 NM_001080541 23269 Hs.187569 NM_001080541 ENSG00000174197 MGA MAD5|MXD5 MAX dimerization protein MGA protein-coding chr2-11287 chr2 185295841 185296051 + 4.71 0.000 Intergenic L1P2|LINE|L1 -128874 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA chr14-5014 chr14 77989064 77989274 + 4.71 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -181204 NR_073547 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr2-10766 chr2 39842622 39842832 + 4.71 0.000 Intergenic Intergenic -63451 NR_135659 80745 Hs.468254 NM_025264 ENSG00000138050 THUMPD2 C2orf8 THUMP domain containing 2 protein-coding chr19-5532 chr19 49712423 49712633 + 4.71 0.000 intron (NM_152359, intron 16 of 18) intron (NM_152359, intron 16 of 18) 21412 NR_108072 126129 Hs.112195 NM_152359 ENSG00000169169 CPT1C CATL1|CPT1-B|CPT1P|CPTI-B|CPTIC|SPG73 carnitine palmitoyltransferase 1C protein-coding chr7-3143 chr7 66393780 66393990 + 4.71 0.000 intron (NR_026873, intron 3 of 4) SVA_E|Retroposon|SVA 6523 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr15-4625 chr15 62242748 62242958 + 4.71 0.000 non-coding (NR_136885, exon 11 of 11) non-coding (NR_136885, exon 11 of 11) 5942 NR_136885 255180 Hs.370479 NM_173805 GOLGA2P11 - GOLGA2 pseudogene 11 pseudo chr6-5834 chr6 27617683 27617893 + 4.71 0.000 Intergenic Intergenic -76247 NR_038293 100507173 Hs.635987 NR_038292 ENSG00000281706 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA chrX-1018 chrX 50008620 50008830 + 4.71 0.000 promoter-TSS (NR_030225) promoter-TSS (NR_030225) -239 NR_029850 574030 NR_029850 ENSG00000208015 MIR362 MIRN362|hsa-mir-362|mir-362 microRNA 362 ncRNA chr7-7881 chr7 5896472 5896682 + 4.71 0.000 Intergenic Intergenic -2156 NM_015622 51622 Hs.530000 NM_015622 ENSG00000122674 CCZ1 C7orf28A|CCZ1A|CGI-43|H_DJ1163J12.2 CCZ1 homolog, vacuolar protein trafficking and biogenesis associated protein-coding chr14-2262 chr14 20806108 20806318 + 4.71 0.000 Intergenic AluJb|SINE|Alu -3369 NM_002933 6035 Hs.78224 NM_002933 ENSG00000129538 RNASE1 RAC1|RIB1|RNS1 ribonuclease A family member 1, pancreatic protein-coding chr1-14176 chr1 32910963 32911173 + 4.71 0.000 Intergenic L2a|LINE|L2 -9679 NM_001329723 113452 Hs.534521 NM_033504 ENSG00000121900 TMEM54 BCLP|CAC-1|CAC1 transmembrane protein 54 protein-coding chr10-7957 chr10 55472416 55472626 + 4.71 0.000 intron (NM_001354404, intron 2 of 34) intron (NM_001354404, intron 2 of 34) -126521 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding chr16-6280 chr16 31387274 31387484 + 4.71 0.000 Intergenic Intergenic -5956 NM_001318185 3681 Hs.679163 NM_005353 ENSG00000156886 ITGAD ADB2|CD11D integrin subunit alpha D protein-coding chr10-7432 chr10 6069905 6070115 + 4.71 0.000 Intergenic AluSx1|SINE|Alu -7640 NM_000417 3559 Hs.231367 NM_000417 ENSG00000134460 IL2RA CD25|IDDM10|IL2R|IMD41|TCGFR|p55 interleukin 2 receptor subunit alpha protein-coding chr15-5088 chr15 87893625 87893835 + 4.71 0.000 intron (NM_001012338, intron 17 of 19) intron (NM_001012338, intron 17 of 19) 52538 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr3-8664 chr3 179433361 179433571 + 4.71 0.000 intron (NM_021629, intron 1 of 9) AluJr|SINE|Alu 18004 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr17-8165 chr17 61139227 61139437 + 4.71 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 228372 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr4-3494 chr4 138839696 138839906 + 4.71 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 172845 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr4-3687 chr4 49633237 49633447 + 4.71 0.000 Intergenic (GAATG)n|Satellite|Satellite 646700 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr1-10544 chr1 171390400 171390610 + 4.71 0.000 Intergenic LTR12_|LTR|ERV1 51609 NR_002719 7151 Hs.661092 NR_002719 TOP1P1 - DNA topoisomerase I pseudogene 1 pseudo chr21-1618 chr21 19807115 19807325 + 4.71 0.000 Intergenic Intergenic 92535 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr8-6296 chr8 42736503 42736713 + 4.71 0.000 exon (NM_000749, exon 6 of 6) exon (NM_000749, exon 6 of 6) 32178 NM_004198 8973 Hs.103128 NM_004198 ENSG00000147434 CHRNA6 CHNRA6 cholinergic receptor nicotinic alpha 6 subunit protein-coding chr21-1859 chr21 42163691 42163901 + 4.71 0.000 Intergenic Intergenic -35893 NM_207627 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr2-7141 chr2 195094546 195094756 + 4.71 0.000 Intergenic L1PA16|LINE|L1 364056 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr12-7012 chr12 32133896 32134106 + 4.71 0.000 intron (NR_148725, intron 1 of 9) AluYm1|SINE|Alu 27154 NM_001354189 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr3-5909 chr3 40873337 40873547 + 4.71 0.000 Intergenic Intergenic -326063 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr1-15327 chr1 119549773 119549983 + 4.71 0.000 Intergenic Intergenic -14002 NR_033781 128102 Hs.681806 NR_033781 HSD3BP4 - hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 4 pseudo chr3-10025 chr3 102741629 102741839 + 4.71 0.000 Intergenic HERVL18-int|LTR|ERVL 306719 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr12-8282 chr12 125649391 125649601 + 4.71 0.000 intron (NM_052907, intron 6 of 8) MIRb|SINE|MIR 27044 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr15-4521 chr15 53700049 53700259 + 4.71 0.000 intron (NM_182758, intron 12 of 19) intron (NM_182758, intron 12 of 19) 59509 NM_182758 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr1-13837 chr1 19786949 19787159 + 4.71 0.000 5' UTR (NM_001349115, exon 3 of 10) 5' UTR (NM_001349115, exon 3 of 10) 12295 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr19-6205 chr19 5755065 5755275 + 4.71 0.000 intron (NM_152784, intron 13 of 21) MLT1N2|LTR|ERVL-MaLR 29576 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chr3-9359 chr3 46836350 46836560 + 4.71 0.000 Intergenic MER30|DNA|hAT-Charlie -2360 NR_160554 339906 Hs.585127 NM_182702 ENSG00000178055 PRSS42P PRSS42|TESSP2 serine protease 42, pseudogene pseudo chr6-5815 chr6 17161247 17161457 + 4.71 0.000 Intergenic MER5A|DNA|hAT-Charlie 59094 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr4-5521 chr4 99012651 99012861 + 4.71 0.000 intron (NM_015143, intron 1 of 10) MER4D1|LTR|ERV1 15369 NR_037455 100500867 NR_037455 ENSG00000265213 MIR3684 - microRNA 3684 ncRNA chrX-2195 chrX 40349415 40349625 + 4.71 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 86603 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr4-6534 chr4 171486360 171486570 + 4.71 0.000 Intergenic AluSx1|SINE|Alu 152298 NR_147157 105377536 Hs.550719 NR_147157 ENSG00000249297 LINC02174 - long intergenic non-protein coding RNA 2174 ncRNA chr8-7439 chr8 140773844 140774054 + 4.71 0.000 intron (NR_148036, intron 14 of 34) LTR23|LTR|ERV1 -41296 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chrX-4278 chrX 41772251 41772461 + 4.71 0.000 intron (NM_003688, intron 3 of 26) AluSx1|SINE|Alu 48175 NM_080817 27197 Hs.567457 NM_080817 ENSG00000171657 GPR82 - G protein-coupled receptor 82 protein-coding chr5-8084 chr5 95800158 95800368 + 4.71 0.000 Intergenic MER5A|DNA|hAT-Charlie 22463 NM_001118890 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr19-6646 chr19 33241463 33241673 + 4.71 0.000 Intergenic Intergenic -15718 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr17-8462 chr17 77736270 77736480 + 4.60 0.000 Intergenic Intergenic -7816 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr14-4437 chr14 33012737 33012947 + 4.60 0.000 intron (NM_001165893, intron 1 of 10) AluSx1|SINE|Alu 73963 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr4-7755 chr4 94006571 94006781 + 4.60 0.000 Intergenic A-rich|Low_complexity|Low_complexity 177923 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr11-10558 chr11 121443797 121444007 + 4.60 0.000 Intergenic LTR82B|LTR|ERVL -8412 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr1-13937 chr1 23622793 23623003 + 4.60 0.000 Intergenic AluSq|SINE|Alu -4436 NM_001348075 259283 Hs.523369 NM_001348075 MDS2 - myelodysplastic syndrome 2 translocation associated protein-coding chr18-2779 chr18 1941374 1941584 + 4.60 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -581850 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr6-6002 chr6 103021155 103021365 + 4.60 0.000 Intergenic (TTA)n|Simple_repeat|Simple_repeat 1622275 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr6-6028 chr6 117877776 117877986 + 4.60 0.000 Intergenic Intergenic -29383 NM_001029858 222553 Hs.654841 NM_001029858 ENSG00000196376 SLC35F1 C6orf169|dJ230I3.1 solute carrier family 35 member F1 protein-coding chr3-6383 chr3 89710074 89710284 + 4.60 0.000 Intergenic Intergenic 602558 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr19-4480 chr19 5647290 5647500 + 4.60 0.000 intron (NM_001201340, intron 4 of 19) intron (NM_001201340, intron 4 of 19) 24312 NM_001201339 6294 Hs.728802 NM_002967 ENSG00000160633 SAFB HAP|HET|SAB-B1|SAF-B|SAF-B1|SAFB1 scaffold attachment factor B protein-coding chr17-4431 chr17 42841034 42841244 + 4.60 0.000 intron (NR_049772, intron 9 of 9) AluY|SINE|Alu -3441 NM_009590 314 Hs.143102 NM_001158 ENSG00000131480 AOC2 DAO2|RAO|SSAO amine oxidase copper containing 2 protein-coding chr4-6847 chr4 8999292 8999502 + 4.60 0.000 Intergenic Intergenic -127558 NM_001306142 3166 Hs.104134 NM_018942 ENSG00000215612 HMX1 H6|NKX5-3 H6 family homeobox 1 protein-coding chr7-6948 chr7 96466710 96466920 + 4.60 0.000 Intergenic Intergenic 36708 NR_163949 chr2-12033 chr2 29364431 29364641 + 4.60 0.000 intron (NM_004304, intron 5 of 28) intron (NM_004304, intron 5 of 28) 110841 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr20-4180 chr20 45207038 45207248 + 4.60 0.000 intron (NM_003007, intron 1 of 2) intron (NM_003007, intron 1 of 2) 110 NM_003007 6406 Hs.1968 NM_003007 ENSG00000124233 SEMG1 CT103|SEMG|SGI|dJ172H20.2 semenogelin 1 protein-coding chr2-13722 chr2 167718151 167718361 + 4.60 0.000 Intergenic Intergenic -100416 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr16-6105 chr16 13158438 13158648 + 4.60 0.000 intron (NM_001145204, intron 2 of 4) MLT1N2|LTR|ERVL-MaLR 256945 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr19-6172 chr19 4852346 4852556 + 4.60 0.000 intron (NM_001164189, intron 4 of 7) intron (NM_001164189, intron 4 of 7) 15216 NM_005817 10226 Hs.140452 NM_005817 ENSG00000105355 PLIN3 M6PRBP1|PP17|TIP47 perilipin 3 protein-coding chr7-8070 chr7 23839244 23839454 + 4.60 0.000 Intergenic Intergenic 129130 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr17-7447 chr17 12815873 12816083 + 4.60 0.000 intron (NM_001321164, intron 1 of 20) intron (NM_001321164, intron 1 of 20) -25694 NR_104607 100128006 Hs.567641 NR_104607 ENSG00000265489 LOC100128006 - uncharacterized LOC100128006 ncRNA chr14-3924 chr14 102732458 102732668 + 4.60 0.000 Intergenic Intergenic -44886 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr22-3878 chr22 34744858 34745068 + 4.60 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 252953 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr13-3724 chr13 39875633 39875843 + 4.60 0.000 Intergenic Intergenic -211603 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr18-3276 chr18 52042024 52042234 + 4.60 0.000 Intergenic Intergenic -298068 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr15-3123 chr15 65650096 65650306 + 4.60 0.000 intron (NM_001254740, intron 3 of 6) CR1-3_Croc|LINE|CR1 7322 NM_001254740 9187 Hs.173092 NM_004727 ENSG00000074621 SLC24A1 CSNB1D|HsT17412|NCKX|NCKX1|RODX solute carrier family 24 member 1 protein-coding chr21-902 chr21 18891859 18892069 + 4.60 0.000 Intergenic L1MC2|LINE|L1 -132152 NR_109925 101927797 Hs.551743 NR_109925 MIR548XHG - MIR548X host gene ncRNA chr3-6079 chr3 52123246 52123456 + 4.60 0.000 intron (NM_015426, intron 8 of 10) intron (NM_015426, intron 8 of 10) 31072 NM_001161580 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr4-7499 chr4 73674513 73674723 + 4.60 0.000 Intergenic Intergenic -53987 NM_001270392 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr2-12525 chr2 65604148 65604358 + 4.60 0.000 Intergenic LTR16A|LTR|ERVL -171654 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2-2276 chr2 26370823 26371033 + 4.60 0.000 intron (NR_137633, intron 4 of 9) SVA_D|Retroposon|SVA -24139 NM_001321971 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr21-1454 chr21 32126871 32127081 + 4.60 0.000 Intergenic HAL1|LINE|L1 -40681 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr13-3209 chr13 20988516 20988726 + 4.60 0.000 exon (NM_014572, exon 4 of 8) exon (NM_014572, exon 4 of 8) -39193 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr5-6274 chr5 104109269 104109479 + 4.60 0.000 Intergenic L1M4c|LINE|L1 -546585 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr11-6974 chr11 115617327 115617537 + 4.60 0.000 Intergenic MIRc|SINE|MIR -113017 NM_014333 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr4-5537 chr4 116589757 116589967 + 4.60 0.000 Intergenic AluY|SINE|Alu 290137 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr3-10196 chr3 120140433 120140643 + 4.60 0.000 Intergenic LTR12C|LTR|ERV1 -46091 NM_001354596 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr4-5586 chr4 177306510 177306720 + 4.60 0.000 Intergenic AluSx3|SINE|Alu -3259 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr15-3793 chr15 69608372 69608582 + 4.60 0.000 intron (NR_126438, intron 1 of 3) intron (NR_126438, intron 1 of 3) 16277 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr16-5728 chr16 84330359 84330569 + 4.60 0.000 TTS (NM_021197) TTS (NM_021197) 35586 NM_001282467 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr17-7735 chr17 33766311 33766521 + 4.60 0.000 intron (NM_001094, intron 1 of 9) LTR78|LTR|ERV1 -232656 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr2-14638 chr2 235178588 235178798 + 4.60 0.000 Intergenic Intergenic 150958 NM_001371306 chr5-7794 chr5 64615039 64615249 + 4.60 0.000 Intergenic L4_C_Mam|LINE|RTE-X 39494 NM_001271890 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr19-3571 chr19 47341180 47341390 + 4.60 0.000 exon (NM_001271750, exon 2 of 2) exon (NM_001271750, exon 2 of 2) 798 NM_001271750 27202 Hs.534412 NM_018485 ENSG00000134830 C5AR2 C5L2|GPF77|GPR77 complement component 5a receptor 2 protein-coding chr2-14090 chr2 199670252 199670462 + 4.60 0.000 Intergenic Intergenic 62289 NR_110270 101927641 Hs.549598 NR_110270 ENSG00000238217 LINC01877 - long intergenic non-protein coding RNA 1877 ncRNA chr2-9334 chr2 225547457 225547667 + 4.60 0.000 intron (NM_001371273, intron 4 of 7) L1MA3|LINE|L1 146676 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr20-3748 chr20 19017470 19017680 + 4.60 0.000 Intergenic Intergenic -187372 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr18-2827 chr18 6507685 6507895 + 4.60 0.000 Intergenic Intergenic -3626 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA chr13-2049 chr13 50450248 50450458 + 4.60 0.000 intron (NR_109974, intron 4 of 6) AluJo|SINE|Alu 77096 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr19-4137 chr19 19656396 19656606 + 4.60 0.000 intron (NM_020410, intron 7 of 25) intron (NM_020410, intron 7 of 25) 7175 NM_020410 57130 Hs.501794 NM_020410 ENSG00000105726 ATP13A1 ATP13A|CGI-152 ATPase 13A1 protein-coding chr11-8681 chr11 4449551 4449761 + 4.60 0.000 exon (NM_001005172, exon 1 of 1) exon (NM_001005172, exon 1 of 1) 361 NM_001005172 119774 Hs.553568 NM_001005172 ENSG00000181963 OR52K2 OR11-7 olfactory receptor family 52 subfamily K member 2 protein-coding chr17-2710 chr17 63587893 63588103 + 4.60 0.000 intron (NR_073585, intron 6 of 7) AluSx|SINE|Alu -12897 NM_016360 51204 Hs.174134 NM_016360 ENSG00000136463 TACO1 CCDC44 translational activator of cytochrome c oxidase I protein-coding chr6-6474 chr6 110840667 110840877 + 4.60 0.000 intron (NM_001287215, intron 1 of 8) MER21A|LTR|ERVL -7774 NR_145728 109616968 NR_145728 ENSG00000212587 SNORA40C - small nucleolar RNA, H/ACA box 40C snoRNA chr4-7620 chr4 82612559 82612769 + 4.60 0.000 TTS (NR_024087) TTS (NR_024087) 8773 NR_024087 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr1-12498 chr1 20961835 20962045 + 4.60 0.000 intron (NM_003760, intron 7 of 31) intron (NM_003760, intron 7 of 31) 26492 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr12-4706 chr12 49772761 49772971 + 4.60 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 31057 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr19-6222 chr19 6145452 6145662 + 4.60 0.000 intron (NM_001321384, intron 2 of 14) intron (NM_001321384, intron 2 of 14) 9890 NM_001289178 81616 Hs.465720 NM_030924 ENSG00000130377 ACSBG2 BGR|BRGL|PRTD-NY3|PRTDNY3 acyl-CoA synthetase bubblegum family member 2 protein-coding chr12-2288 chr12 111723419 111723629 + 4.60 0.000 intron (NM_025247, intron 8 of 20) SVA_F|Retroposon|SVA 37471 NM_001136538 80724 Hs.331141 NM_025247 ENSG00000111271 ACAD10 - acyl-CoA dehydrogenase family member 10 protein-coding chr8-3038 chr8 141106992 141107202 + 4.60 0.000 Intergenic L1MB5|LINE|L1 -21492 NM_001352890 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chrX-3020 chrX 68676906 68677116 + 4.60 0.000 intron (NM_014725, intron 2 of 13) AluJb|SINE|Alu -16628 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chrX-4647 chrX 79573090 79573300 + 4.60 0.000 Intergenic MLT1D-int|LTR|ERVL-MaLR -205643 NM_001171581 9452 Hs.17109 NM_004867 ENSG00000078596 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding chr10-7643 chr10 24858731 24858941 + 4.60 0.000 intron (NM_020200, intron 4 of 8) intron (NM_020200, intron 4 of 8) 93770 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr4-6055 chr4 4607241 4607451 + 4.60 0.000 intron (NR_037888, intron 2 of 5) intron (NR_037888, intron 2 of 5) -56980 NR_145783 109623454 NR_145783 SNORD162 - small nucleolar RNA, C/D box 162 snoRNA chr16-4502 chr16 57902739 57902949 + 4.60 0.000 intron (NM_001297, intron 27 of 32) AluJb|SINE|Alu 68284 NM_001297 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr15-3783 chr15 68314363 68314573 + 4.60 0.000 intron (NM_001004439, intron 22 of 29) intron (NM_001004439, intron 22 of 29) 36723 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr7-9116 chr7 107660396 107660606 + 4.60 0.000 promoter-TSS (NM_000441) promoter-TSS (NM_000441) -327 NM_000441 5172 Hs.571246 NM_000441 ENSG00000091137 SLC26A4 DFNB4|EVA|PDS|TDH2B solute carrier family 26 member 4 protein-coding chr5-8799 chr5 149515430 149515640 + 4.60 0.000 intron (NM_001271741, intron 4 of 9) intron (NM_001271741, intron 4 of 9) 34830 NM_001271742 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding chr11-7451 chr11 122173466 122173676 + 4.60 0.000 intron (NR_024430, intron 2 of 3) intron (NR_024430, intron 2 of 3) 7061 NR_137185 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr20-2796 chr20 56371962 56372172 + 4.60 0.000 intron (NM_198433, intron 9 of 10) intron (NM_198433, intron 9 of 10) 13093 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding chrX-3789 chrX 135071654 135071864 + 4.60 0.000 Intergenic AluJr4|SINE|Alu -19568 NM_001078172 26071 Hs.460924 NM_015582 ENSG00000203950 RTL8A CXX1b|FAM127B|MAR8A|SIRH6 retrotransposon Gag like 8A protein-coding chr9-5149 chr9 37959157 37959367 + 4.60 0.000 intron (NM_003028, intron 3 of 5) intron (NM_003028, intron 3 of 5) -54909 NR_024872 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr11-5524 chr11 88337506 88337716 + 4.60 0.000 exon (NM_001814, exon 1 of 7) exon (NM_001814, exon 1 of 7) 125 NM_001814 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding chr22-3834 chr22 31828867 31829077 + 4.60 0.000 intron (NR_146296, intron 24 of 42) intron (NR_146296, intron 24 of 42) 74949 NM_001369901 9681 Hs.435022 NM_014662 ENSG00000100150 DEPDC5 DEP.5|FFEVF|FFEVF1 DEP domain containing 5 protein-coding chr4-6583 chr4 528520 528730 + 4.60 0.000 intron (NR_144327, intron 10 of 12) intron (NR_144327, intron 10 of 12) 29415 NM_001345989 54872 Hs.7099 NM_017733 ENSG00000174227 PIGG GPI7|LAS21|MRT53|PRO4405|RLGS1930 phosphatidylinositol glycan anchor biosynthesis class G protein-coding chr6-5795 chr6 8377240 8377450 + 4.60 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 58200 NM_001370478 51000 Hs.285847 NM_015948 ENSG00000124786 SLC35B3 C6orf196|CGI-19|PAPST2 solute carrier family 35 member B3 protein-coding chr4-5654 chr4 9756376 9756586 + 4.60 0.000 Intergenic SATR2|Satellite|Satellite -25153 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr9-6553 chr9 118252247 118252457 + 4.60 0.000 Intergenic Intergenic -427319 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr2-10820 chr2 53179050 53179260 + 4.60 0.000 Intergenic Intergenic -476540 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr9-6396 chr9 34469224 34469434 + 4.60 0.000 intron (NM_001281428, intron 1 of 19) AluJb|SINE|Alu 10524 NM_012144 27019 Hs.112667 NM_012144 ENSG00000122735 DNAI1 CILD1|DIC1|ICS1|PCD dynein axonemal intermediate chain 1 protein-coding chr8-6085 chr8 26836807 26837017 + 4.60 0.000 intron (NM_001322504, intron 1 of 1) intron (NM_001322504, intron 1 of 1) 28743 NR_136343 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding chr7-5826 chr7 84443693 84443903 + 4.60 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -88678 NR_110079 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chrX-4741 chrX 92966276 92966486 + 4.60 0.000 Intergenic Intergenic -141478 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr1-13572 chr1 8089439 8089649 + 4.60 0.000 Intergenic L2a|LINE|L2 -63235 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr13-2332 chr13 33654480 33654690 + 4.60 0.000 intron (NM_001243476, intron 3 of 17) L1MB7|LINE|L1 22209 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr20-853 chr20 57090984 57091194 + 4.60 0.000 Intergenic (CCACAC)n|Simple_repeat|Simple_repeat -122607 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr1-15635 chr1 162849614 162849824 + 4.60 0.000 Intergenic Intergenic 19096 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr14-2422 chr14 65825857 65826067 + 4.60 0.000 Intergenic Intergenic 354860 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr1-15009 chr1 92491820 92492030 + 4.60 0.000 Intergenic Intergenic -5000 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr18-2590 chr18 13554888 13555098 + 4.60 0.000 intron (NM_181482, intron 4 of 5) L1MC3|LINE|L1 -56121 NR_039752 100616130 NR_039752 ENSG00000263527 MIR4526 mir-4526 microRNA 4526 ncRNA chr14-4355 chr14 23605943 23606153 + 4.60 0.000 Intergenic Intergenic -24067 NM_001318835 10202 Hs.272499 NM_005794 ENSG00000100867 DHRS2 HEP27|SDR25C1 dehydrogenase/reductase 2 protein-coding chr18-3125 chr18 37568024 37568234 + 4.60 0.000 Intergenic Intergenic -2331 NR_148528 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr13-1630 chr13 51931352 51931562 + 4.60 0.000 Intergenic L1PA7|LINE|L1 69488 NM_001346075 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr22-4255 chr22 48256107 48256317 + 4.60 0.000 Intergenic Intergenic -18152 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr18-3154 chr18 41673081 41673291 + 4.60 0.000 Intergenic Intergenic -152509 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr22-2733 chr22 39244166 39244376 + 4.60 0.000 5' UTR (NM_002608, exon 1 of 7) 5' UTR (NM_002608, exon 1 of 7) 711 NM_002608 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr5-8891 chr5 155403062 155403272 + 4.60 0.000 Intergenic L1PBa|LINE|L1 389412 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr1-16482 chr1 228975474 228975684 + 4.60 0.000 Intergenic Intergenic 199222 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr1-7215 chr1 221856390 221856600 + 4.60 0.000 Intergenic Intergenic -15829 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr2-13177 chr2 120516550 120516760 + 4.60 0.000 Intergenic MIRc|SINE|MIR -50306 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr4-3856 chr4 128160034 128160244 + 4.60 0.000 intron (NR_146772, intron 11 of 19) MER58A|DNA|hAT-Charlie 98827 NR_146772 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr14-5397 chr14 104146815 104147025 + 4.60 0.000 intron (NM_015656, intron 2 of 14) intron (NM_015656, intron 2 of 14) 8197 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding chr4-6361 chr4 105114733 105114943 + 4.60 0.000 Intergenic Intergenic -31037 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr5-6427 chr5 156421780 156421990 + 4.60 0.000 intron (NM_001128209, intron 2 of 7) intron (NM_001128209, intron 2 of 7) 94721 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr16-6336 chr16 49766436 49766646 + 4.60 0.000 intron (NM_001271620, intron 2 of 7) intron (NM_001271620, intron 2 of 7) 56197 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr2-13978 chr2 189641151 189641361 + 4.60 0.000 Intergenic L2b|LINE|L2 -20143 NM_001353493 110599588 Hs.101364 NM_001353493 ENSG00000286053 ASDURF ASNSD1|ASNSD1-SEP|NS3TP1 ASNSD1 upstream reading frame protein-coding chr8-6053 chr8 24833605 24833815 + 4.60 0.000 Intergenic Intergenic -80051 NM_005382 4741 Hs.458657 NM_005382 ENSG00000104722 NEFM NEF3|NF-M|NFM neurofilament medium protein-coding chr5-5379 chr5 133856543 133856753 + 4.60 0.000 Intergenic Intergenic -57029 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr17-7270 chr17 3034309 3034519 + 4.60 0.000 3' UTR (NM_015085, exon 25 of 25) 3' UTR (NM_015085, exon 25 of 25) 29193 NM_014566 8386 Hs.553508 NM_014566 ENSG00000262628 OR1D5 C17orf2|OR17-2|OR17-30|OR17-31|OR1D4 olfactory receptor family 1 subfamily D member 5 protein-coding chr19-6980 chr19 48530190 48530400 + 4.60 0.000 Intergenic Intergenic -17106 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr5-7530 chr5 37583399 37583609 + 4.60 0.000 intron (NM_001345998, intron 9 of 17) intron (NM_001345998, intron 9 of 17) 204186 NM_001345999 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chrX-4385 chrX 50873665 50873875 + 4.60 0.000 Intergenic AluSc8|SINE|Alu -36965 NM_005448 9210 Hs.532692 NM_005448 ENSG00000130385 BMP15 GDF9B|ODG2|POF4 bone morphogenetic protein 15 protein-coding chr8-4951 chr8 117130150 117130360 + 4.60 0.000 intron (NM_001172815, intron 2 of 10) intron (NM_001172815, intron 2 of 10) -4740 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr1-10236 chr1 116275707 116275917 + 4.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -97432 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr15-4295 chr15 38461042 38461252 + 4.60 0.000 intron (NM_173611, intron 1 of 7) intron (NM_173611, intron 1 of 7) 7020 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr3-11239 chr3 196521951 196522161 + 4.60 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -6710 NM_001320473 255798 Hs.631933 NM_001077657 ENSG00000214097 SMCO1 C3orf43 single-pass membrane protein with coiled-coil domains 1 protein-coding chr16-6898 chr16 84800396 84800606 + 4.60 0.000 Intergenic Intergenic -19484 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr8-4436 chr8 111351029 111351239 + 4.60 0.000 Intergenic THE1D|LTR|ERVL-MaLR -25505 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr3-5951 chr3 45780508 45780718 + 4.60 0.000 intron (NM_022405, intron 2 of 9) intron (NM_022405, intron 2 of 9) 15923 NM_020208 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr5-8195 chr5 106294600 106294810 + 4.60 0.000 Intergenic MLT1I-int|LTR|ERVL-MaLR 716309 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr2-4007 chr2 97692313 97692523 + 4.60 0.000 intron (NR_038386, intron 7 of 9) AluSx|SINE|Alu -21150 NM_001079 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr9-6128 chr9 27029385 27029595 + 4.60 0.000 intron (NM_025103, intron 13 of 19) AluSp|SINE|Alu -23818 NM_022901 64922 Hs.128071 NM_022901 ENSG00000184434 LRRC19 - leucine rich repeat containing 19 protein-coding chr10-7979 chr10 59536486 59536696 + 4.60 0.000 Intergenic Intergenic 173300 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr4-5179 chr4 158279039 158279249 + 4.60 0.000 Intergenic Intergenic 68658 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr11-5807 chr11 6496128 6496338 + 4.60 0.000 Intergenic L2a|LINE|L2 -1047 NM_173589 144132 Hs.720080 NM_144666 ENSG00000179532 DNHD1 C11orf47|CCDC35|DHCD1|DNHD1L dynein heavy chain domain 1 protein-coding chr4-5322 chr4 181685454 181685664 + 4.60 0.000 Intergenic Intergenic 144414 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr18-1958 chr18 37298045 37298255 + 4.60 0.000 intron (NM_001353741, intron 3 of 13) intron (NM_001353741, intron 3 of 13) 23690 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr11-7623 chr11 48122379 48122589 + 4.60 0.000 intron (NM_001098503, intron 4 of 8) intron (NM_001098503, intron 4 of 8) 25702 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr3-10376 chr3 128820797 128821007 + 4.60 0.000 Intergenic Intergenic -25906 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr6-3751 chr6 11354176 11354386 + 4.60 0.000 intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 28067 NM_001142393 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr5-6158 chr5 44653819 44654029 + 4.60 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -143642 NR_131946 102723839 Hs.561412 NR_131946 LINC02224 BRCAT107 long intergenic non-protein coding RNA 2224 ncRNA chr8-5018 chr8 6526156 6526366 + 4.60 0.000 intron (NM_001147, intron 3 of 8) AluJb|SINE|Alu 36984 NM_001147 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr4-7365 chr4 59675527 59675737 + 4.60 0.000 Intergenic Intergenic 662059 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr18-3459 chr18 68953345 68953555 + 4.60 0.000 intron (NM_001093729, intron 8 of 9) L1M3|LINE|L1 155370 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chr19-5339 chr19 3911455 3911665 + 4.60 0.000 intron (NM_033064, intron 8 of 12) (TATA)n|Simple_repeat|Simple_repeat -21543 NM_001289117 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr5-3707 chr5 11182083 11182293 + 4.60 0.000 intron (NM_001288715, intron 10 of 20) (GT)n|Simple_repeat|Simple_repeat 406729 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr12-4601 chr12 38236805 38237015 + 4.60 0.000 Intergenic MSTB2|LTR|ERVL-MaLR -79864 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr8-4671 chr8 138695778 138695988 + 4.60 0.000 intron (NM_152888, intron 32 of 64) intron (NM_152888, intron 32 of 64) -198153 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr11-10007 chr11 79840627 79840837 + 4.60 0.000 Intergenic AluY|SINE|Alu -399702 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr13-4355 chr13 103847989 103848199 + 4.60 0.000 Intergenic Intergenic 422894 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr12-3915 chr12 129722651 129722861 + 4.60 0.000 intron (NM_133448, intron 1 of 8) AluSz|SINE|Alu 181269 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr12-6403 chr12 74487537 74487747 + 4.60 0.000 Intergenic AluSg4|SINE|Alu -50193 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr8-5606 chr8 94961787 94961997 + 4.60 0.000 intron (NM_001354534, intron 2 of 8) MER5A|DNA|hAT-Charlie 12332 NR_148907 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr16-6351 chr16 50549723 50549933 + 4.60 0.000 intron (NM_033119, intron 3 of 9) intron (NM_033119, intron 3 of 9) 1432 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr1-15887 chr1 183214767 183214977 + 4.60 0.000 intron (NM_005562, intron 2 of 22) intron (NM_005562, intron 2 of 22) 28608 NM_018891 3918 Hs.591484 NM_005562 ENSG00000058085 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin subunit gamma 2 protein-coding chr14-4226 chr14 98210231 98210441 + 4.60 0.000 Intergenic Intergenic -232212 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr11-6927 chr11 110463251 110463461 + 4.60 0.000 3' UTR (NM_004109, exon 4 of 4) 3' UTR (NM_004109, exon 4 of 4) 33408 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chr4-8673 chr4 179724454 179724664 + 4.60 0.000 Intergenic HERVH-int|LTR|ERV1 1434590 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chrX-4744 chrX 93475864 93476074 + 4.60 0.000 Intergenic L1PA8A|LINE|L1 197609 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr16-4572 chr16 67235823 67236033 + 4.60 0.000 intron (NM_013241, intron 11 of 21) intron (NM_013241, intron 11 of 21) 8798 NM_014187 29100 Hs.433203 NM_014187 ENSG00000168701 TMEM208 HSPC171 transmembrane protein 208 protein-coding chr6-7297 chr6 43716838 43717048 + 4.60 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -29131 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr20-3535 chr20 979739 979949 + 4.60 0.000 intron (NM_001029871, intron 1 of 4) L2a|LINE|L2 22467 NM_001029871 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding chr1-16598 chr1 236996300 236996510 + 4.60 0.000 Intergenic LTR45|LTR|ERV1 8036 NM_001276687 645745 Hs.632513 NM_001039954 ENSG00000244020 MT1HL1 MT1P2 metallothionein 1H like 1 protein-coding chr5-5352 chr5 131921442 131921652 + 4.60 0.000 intron (NM_001303622, intron 6 of 12) AluSx|SINE|Alu 24116 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chr3-9611 chr3 57169977 57170187 + 4.60 0.000 intron (NM_001318864, intron 1 of 13) intron (NM_001318864, intron 1 of 13) 235 NM_001318864 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding chr9-6188 chr9 90128392 90128602 + 4.60 0.000 Intergenic Intergenic -86998 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr9-8131 chr9 100850932 100851142 + 4.60 0.000 Intergenic Intergenic -177690 NM_207299 54886 Hs.382683 NM_017753 ENSG00000148123 PLPPR1 LPPR1|PRG-3 phospholipid phosphatase related 1 protein-coding chr6-6821 chr6 6967111 6967321 + 4.60 0.000 Intergenic L2c|LINE|L2 -140527 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr9-4663 chr9 120206596 120206806 + 4.60 0.000 Intergenic Intergenic 38349 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr16-4731 chr16 84136540 84136750 + 4.60 0.000 intron (NM_031463, intron 1 of 5) intron (NM_031463, intron 1 of 5) 8532 NM_031463 83693 Hs.555992 NM_031463 ENSG00000103160 HSDL1 SDR12C3 hydroxysteroid dehydrogenase like 1 protein-coding chr9-8523 chr9 126063226 126063436 + 4.60 0.000 Intergenic Intergenic 212584 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chrX-2795 chrX 133501726 133501936 + 4.60 0.000 Intergenic Intergenic -86342 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr4-8020 chr4 118002770 118002980 + 4.60 0.000 Intergenic Intergenic -30447 NR_146513 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chr1-12407 chr1 10133921 10134131 + 4.60 0.000 intron (NM_006048, intron 14 of 26) AluJr|SINE|Alu -76544 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding chr7-6531 chr7 39017720 39017930 + 4.60 0.000 intron (NM_007252, intron 2 of 10) (GT)n|Simple_repeat|Simple_repeat -4258 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr11-7774 chr11 85502729 85502939 + 4.60 0.000 intron (NM_001142699, intron 3 of 27) L1ME3B|LINE|L1 124436 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr3-10835 chr3 164748560 164748770 + 4.60 0.000 intron (NR_126405, intron 1 of 3) intron (NR_126405, intron 1 of 3) 82815 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr2-10192 chr2 96962285 96962495 + 4.60 0.000 intron (NM_001122646, intron 5 of 16) AluSc|SINE|Alu 24190 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr1-9471 chr1 36206574 36206784 + 4.60 0.000 Intergenic MER51B|LTR|ERV1 -17764 NM_001321473 9967 Hs.744057 NM_005119 ENSG00000054118 THRAP3 BCLAF2|TRAP150 thyroid hormone receptor associated protein 3 protein-coding chr19-5088 chr19 55146715 55146925 + 4.60 0.000 intron (NM_003283, intron 3 of 13) CpG-15152 2386 NM_001291774 7138 Hs.631558 NM_003283 ENSG00000105048 TNNT1 ANM|NEM5|STNT|TNT|TNTS troponin T1, slow skeletal type protein-coding chr17-5013 chr17 82677502 82677712 + 4.60 0.000 intron (NM_006822, intron 1 of 5) intron (NM_006822, intron 1 of 5) -9300 NR_039751 100616196 NR_039751 ENSG00000266107 MIR4525 - microRNA 4525 ncRNA chr5-6593 chr5 30875562 30875772 + 4.60 0.000 Intergenic AluSx1|SINE|Alu -318019 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr12-6656 chr12 1029551 1029761 + 4.60 0.000 intron (NR_027949, intron 2 of 15) intron (NR_027949, intron 2 of 15) 1908 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr1-13743 chr1 16061926 16062136 + 4.60 0.000 intron (NM_182623, intron 4 of 6) intron (NM_182623, intron 4 of 6) 11620 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr5-8818 chr5 150222111 150222321 + 4.60 0.000 3' UTR (NM_001363989, exon 20 of 20) 3' UTR (NM_001363989, exon 20 of 20) 32154 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr1-13276 chr1 227928445 227928655 + 4.60 0.000 intron (NM_003395, intron 1 of 3) intron (NM_003395, intron 1 of 3) 13133 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr17-6608 chr17 58825088 58825298 + 4.60 0.000 intron (NM_014906, intron 1 of 6) intron (NM_014906, intron 1 of 6) 69324 NR_048561 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding chr2-12597 chr2 70906518 70906728 + 4.60 0.000 intron (NM_012476, intron 1 of 2) AluJr4|SINE|Alu 6047 NM_012476 25806 Hs.249170 NM_012476 ENSG00000116035 VAX2 DRES93 ventral anterior homeobox 2 protein-coding chr2-9735 chr2 70641211 70641421 + 4.60 0.000 Intergenic Intergenic -87490 NM_003236 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr15-4229 chr15 27399848 27400058 + 4.60 0.000 intron (NM_001270873, intron 5 of 5) intron (NM_001270873, intron 5 of 5) -238634 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr4-6047 chr4 3802127 3802337 + 4.60 0.000 Intergenic MIR1_Amn|SINE|MIR 35847 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr20-4091 chr20 39877870 39878080 + 4.60 0.000 Intergenic Intergenic -126486 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr18-2614 chr18 26746910 26747120 + 4.60 0.000 Intergenic Intergenic -43377 NR_024259 728606 Hs.170599 NR_024259 ENSG00000265369 PCAT18 LINC01092 prostate cancer associated transcript 18 ncRNA chr2-10975 chr2 95385870 95386080 + 4.60 0.000 3' UTR (NM_001034914, exon 8 of 8) 3' UTR (NM_001034914, exon 8 of 8) -16733 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr4-5605 chr4 1404421 1404631 + 4.60 0.000 intron (NM_001290079, intron 1 of 1) CpG 1916 NM_001290079 54729 Hs.526396 NM_001290079 ENSG00000235608 NKX1-1 HSPX153|NKX-1.1|SAX2 NK1 homeobox 1 protein-coding chr22-3110 chr22 11629831 11630041 + 4.60 0.000 Intergenic SSU-rRNA_Hsa|rRNA|rRNA -267470 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr4-8547 chr4 165204574 165204784 + 4.60 0.000 Intergenic Intergenic -2882 NM_007246 11275 Hs.388668 NM_007246 ENSG00000109466 KLHL2 ABP-KELCH|MAV|MAYVEN kelch like family member 2 protein-coding chr6-6799 chr6 5033326 5033536 + 4.60 0.000 intron (NR_126018, intron 1 of 1) intron (NR_126018, intron 1 of 1) 3459 NR_126018 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr13-3418 chr13 98718272 98718482 + 4.60 0.000 intron (NM_005073, intron 8 of 22) AluJb|SINE|Alu 34295 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr14-4010 chr14 41826074 41826284 + 4.60 0.000 intron (NM_001330106, intron 2 of 4) intron (NM_001330106, intron 2 of 4) 219323 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr9-8219 chr9 109339192 109339402 + 4.60 0.000 Intergenic Intergenic -18333 NM_019114 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr11-6554 chr11 70549990 70550200 + 4.60 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) -80999 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA chr5-8504 chr5 133703785 133703995 + 4.60 0.000 Intergenic Intergenic -91349 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr3-10548 chr3 140704091 140704301 + 4.60 0.000 Intergenic LTR50|LTR|ERVL 26132 NM_152616 287015 Hs.343487 NM_152616 ENSG00000155890 TRIM42 PPP1R40|T4A1 tripartite motif containing 42 protein-coding chr7-3045 chr7 120923346 120923556 + 4.60 0.000 Intergenic AluJr|SINE|Alu -27326 NM_019071 54556 Hs.489811 NM_019071 ENSG00000071243 ING3 Eaf4|ING2|MEAF4|p47ING3 inhibitor of growth family member 3 protein-coding chr11-9211 chr11 38166612 38166822 + 4.60 0.000 Intergenic L1PA6|LINE|L1 228116 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr9-6391 chr9 33787392 33787602 + 4.60 0.000 intron (NM_001197098, intron 1 of 4) ERVL-E-int|LTR|ERVL -8064 NM_002771 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr8-5818 chr8 4094468 4094678 + 4.60 0.000 intron (NM_033225, intron 3 of 69) intron (NM_033225, intron 3 of 69) 900341 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr14-3483 chr14 102242653 102242863 + 4.60 0.000 intron (NR_148552, intron 6 of 9) HERVH-int|LTR|ERV1 -2143 NR_073541 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr2-13369 chr2 136808474 136808684 + 4.60 0.000 intron (NM_001316349, intron 1 of 27) L1MC3|LINE|L1 43034 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr3-10214 chr3 121618828 121619038 + 4.60 0.000 intron (NM_016298, intron 1 of 3) intron (NM_016298, intron 1 of 3) 25554 NM_016298 51725 Hs.272564 NM_016298 ENSG00000163833 FBXO40 FBX40 F-box protein 40 protein-coding chr2-12555 chr2 68549821 68550031 + 4.60 0.000 intron (NM_173545, intron 8 of 9) L1MEb|LINE|L1 82341 NM_173545 200558 Hs.720369 NM_173545 ENSG00000169621 APLF APFL|C2orf13|PALF|Xip1|ZCCHH1 aprataxin and PNKP like factor protein-coding chr20-3421 chr20 44501645 44501855 + 4.60 0.000 intron (NM_006811, intron 8 of 9) L2c|LINE|L2 20320 NM_006811 10955 Hs.272168 NM_006811 ENSG00000132824 SERINC3 AIGP1|DIFF33|SBBI99|TDE|TDE1|TMS-1 serine incorporator 3 protein-coding chr19-5549 chr19 54102786 54102996 + 4.60 0.000 promoter-TSS (NM_001282349) promoter-TSS (NM_001282349) 36 NM_004542 4696 Hs.198269 NM_004542 ENSG00000170906 NDUFA3 B9|CI-B9 NADH:ubiquinone oxidoreductase subunit A3 protein-coding chr9-5167 chr9 62881828 62882038 + 4.60 0.000 intron (NR_122076, intron 1 of 5) AluSx1|SINE|Alu -15443 NR_126047 728673 Hs.380240 NR_126047 ENSG00000170161 LOC728673 - uncharacterized LOC728673 ncRNA chr16-6594 chr16 67133363 67133573 + 4.60 0.000 intron (NM_001320542, intron 7 of 16) AluSz|SINE|Alu 17530 NM_033309 84752 Hs.744158 NM_033309 ENSG00000237172 B3GNT9 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 protein-coding chr9-7081 chr9 127276263 127276473 + 4.60 0.000 intron (NR_104591, intron 1 of 26) L2c|LINE|L2 11594 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr7-8485 chr7 50519974 50520184 + 4.60 0.000 intron (NM_001242889, intron 4 of 12) L1MC2|LINE|L1 -11680 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chrX-4491 chrX 64751856 64752066 + 4.60 0.000 Intergenic Intergenic 224489 NR_045044 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr12-7639 chr12 81505192 81505402 + 4.60 0.000 intron (NM_001220474, intron 2 of 30) intron (NM_001220474, intron 2 of 30) 7094 NM_001282536 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr2-10712 chr2 28194428 28194638 + 4.60 0.000 intron (NR_120504, intron 1 of 2) intron (NR_120504, intron 1 of 2) 12428 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr11-10393 chr11 113467240 113467450 + 4.60 0.000 intron (NM_016574, intron 1 of 6) intron (NM_016574, intron 1 of 6) 7934 NM_016574 1813 Hs.73893 NM_000795 ENSG00000149295 DRD2 D2DR|D2R dopamine receptor D2 protein-coding chr6-7834 chr6 103981592 103981802 + 4.60 0.000 Intergenic THE1B|LTR|ERVL-MaLR 877849 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr2-13244 chr2 125763456 125763666 + 4.60 0.000 Intergenic Intergenic 354424 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr8-5439 chr8 37413697 37413907 + 4.60 0.000 intron (NR_121620, intron 6 of 6) MSTB|LTR|ERVL-MaLR 80111 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr12-7421 chr12 59067172 59067382 + 4.60 0.000 Intergenic Intergenic -146739 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr3-7622 chr3 22478711 22478921 + 4.60 0.000 Intergenic MIRb|SINE|MIR 521677 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr2-11169 chr2 149521770 149521980 + 4.60 0.000 Intergenic L1PA11|LINE|L1 -65483 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA chr6-5958 chr6 81481507 81481717 + 4.60 0.000 Intergenic Intergenic 271069 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr7-9576 chr7 146394940 146395150 + 4.60 0.000 Intergenic L1PB4|LINE|L1 -379226 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr20-2007 chr20 52201205 52201415 + 4.60 0.000 Intergenic Intergenic -9325 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr2-11733 chr2 10728919 10729129 + 4.60 0.000 intron (NM_001039362, intron 3 of 13) AluSg4|SINE|Alu 7394 NM_001039362 245973 Hs.580464 NM_144583 ENSG00000143882 ATP6V1C2 ATP6C2|VMA5 ATPase H+ transporting V1 subunit C2 protein-coding chr6-8018 chr6 117811694 117811904 + 4.60 0.000 Intergenic Intergenic -95465 NM_001029858 222553 Hs.654841 NM_001029858 ENSG00000196376 SLC35F1 C6orf169|dJ230I3.1 solute carrier family 35 member F1 protein-coding chr7-7034 chr7 134687493 134687703 + 4.60 0.000 Intergenic Intergenic 40745 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr22-3755 chr22 27135638 27135848 + 4.60 0.000 Intergenic Intergenic -51773 NM_001318392 105372977 Hs.743180 NM_001318392 LOC105372977 - uncharacterized LOC105372977 protein-coding chr1-16324 chr1 217376828 217377038 + 4.60 0.000 Intergenic AluSz|SINE|Alu -239231 NM_001350124 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr20-2746 chr20 50579935 50580145 + 4.60 0.000 intron (NM_002827, intron 8 of 9) intron (NM_002827, intron 8 of 9) -5746 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr1-7725 chr1 28625471 28625681 + 4.60 0.000 intron (NM_005644, intron 1 of 5) AluYk4|SINE|Alu 17491 NM_005644 6883 Hs.530251 NM_005644 ENSG00000120656 TAF12 TAF2J|TAFII20 TATA-box binding protein associated factor 12 protein-coding chrX-1473 chrX 119727408 119727618 + 4.60 0.000 Intergenic Intergenic -31075 NM_001105576 347454 Hs.355223 NM_001105576 ENSG00000187808 SOWAHD ANKRD58 sosondowah ankyrin repeat domain family member D protein-coding chr8-7053 chr8 114311539 114311749 + 4.60 0.000 Intergenic LTR12C|LTR|ERV1 -874705 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr3-9728 chr3 67317365 67317575 + 4.60 0.000 Intergenic LTR16A1|LTR|ERVL 92006 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr14-3853 chr14 76933712 76933922 + 4.60 0.000 Intergenic Intergenic -25821 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr1-12018 chr1 99942973 99943183 + 4.60 0.000 Intergenic MER34B-int|LTR|ERV1 -26918 NM_001271684 23443 Hs.448979 NM_012243 ENSG00000117620 SLC35A3 AMRS solute carrier family 35 member A3 protein-coding chr10-8409 chr10 84237730 84237940 + 4.60 0.000 intron (NM_015613, intron 1 of 3) intron (NM_015613, intron 1 of 3) 3711 NM_015613 26103 Hs.226000 NM_015613 ENSG00000148602 LRIT1 FIGLER9|LRRC21|PAL leucine rich repeat, Ig-like and transmembrane domains 1 protein-coding chr9-6446 chr9 83900787 83900997 + 4.60 0.000 intron (NM_001354071, intron 4 of 16) A-rich|Low_complexity|Low_complexity 20540 NM_001354069 55582 Hs.697514 NM_017576 ENSG00000165115 KIF27 - kinesin family member 27 protein-coding chr11-10213 chr11 97659890 97660100 + 4.60 0.000 Intergenic L1MA9|LINE|L1 1151570 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr5-6543 chr5 12673722 12673932 + 4.60 0.000 intron (NR_033383, intron 2 of 3) L1P3|LINE|L1 5968 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr2-12009 chr2 28363901 28364111 + 4.60 0.000 Intergenic G-rich|Low_complexity|Low_complexity -28852 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr5-8313 chr5 116663630 116663840 + 4.60 0.000 Intergenic MIR|SINE|MIR -88912 NM_020796 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding chrX-4084 chrX 22970056 22970266 + 4.60 0.000 intron (NR_073010, intron 3 of 11) THE1B|LTR|ERVL-MaLR -29799 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr8-7018 chr8 110109095 110109305 + 4.60 0.000 Intergenic L1MA8|LINE|L1 -133429 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr6-6125 chr6 159220109 159220319 + 4.60 0.000 intron (NM_032532, intron 5 of 22) intron (NM_032532, intron 5 of 22) -50207 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA chr19-6577 chr19 21343688 21343898 + 4.60 0.000 Intergenic HERVK9-int|LTR|ERVK -14354 NM_001297560 7562 Hs.466296 NM_021269 ENSG00000182141 ZNF708 KOX8|ZNF15|ZNF15L1 zinc finger protein 708 protein-coding chr3-9575 chr3 54321229 54321439 + 4.60 0.000 intron (NM_018398, intron 3 of 37) FLAM_A|SINE|Alu 198782 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr3-9881 chr3 82047185 82047395 + 4.60 0.000 intron (NR_147146, intron 1 of 8) intron (NR_147146, intron 1 of 8) 61148 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr8-4709 chr8 140655223 140655433 + 4.60 0.000 Intergenic AluSx|SINE|Alu -19695 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr13-3182 chr13 110367372 110367582 + 4.60 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 26519 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr1-15755 chr1 172789886 172790096 + 4.60 0.000 Intergenic MER45A|DNA|hAT-Tip100 130888 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr11-9088 chr11 31374913 31375123 + 4.60 0.000 intron (NM_181706, intron 2 of 4) HAL1|LINE|L1 5158 NM_181706 120526 Hs.187269 NM_181706 ENSG00000170946 DNAJC24 DPH4|JJJ3|ZCSL3 DnaJ heat shock protein family (Hsp40) member C24 protein-coding chr3-7712 chr3 49399579 49399789 + 4.60 0.000 intron (NM_001664, intron 1 of 4) AluJo|SINE|Alu 12292 NM_001313946 387 Hs.247077 NM_001664 ENSG00000067560 RHOA ARH12|ARHA|RHO12|RHOH12 ras homolog family member A protein-coding chr20-2360 chr20 16188006 16188216 + 4.60 0.000 Intergenic Intergenic -202229 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr6-8417 chr6 151167383 151167593 + 4.60 0.000 Intergenic L2|LINE|L2 60969 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr11-6344 chr11 63371210 63371420 + 4.60 0.000 intron (NM_080866, intron 2 of 9) intron (NM_080866, intron 2 of 9) 1530 NM_080866 114571 Hs.502772 NM_080866 ENSG00000149742 SLC22A9 HOAT4|OAT4|OAT7|UST3H|ust3 solute carrier family 22 member 9 protein-coding chr21-1493 chr21 41529796 41530006 + 4.60 0.000 Intergenic Intergenic -21743 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr4-8740 chr4 185579929 185580139 + 4.60 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -44476 NR_047562 27295 Hs.701364 NM_014476 ENSG00000154553 PDLIM3 ALP PDZ and LIM domain 3 protein-coding chrX-4577 chrX 71081680 71081890 + 4.60 0.000 Intergenic Intergenic -8359 NM_001256185 29934 Hs.260750 NM_013346 ENSG00000147164 SNX12 - sorting nexin 12 protein-coding chr3-8038 chr3 195849810 195850020 + 4.60 0.000 intron (NR_134939, intron 1 of 1) intron (NR_134939, intron 1 of 1) 4313 NR_134940 101929697 Hs.551750 NR_134939 LINC01983 - long intergenic non-protein coding RNA 1983 ncRNA chr4-7351 chr4 57447836 57448046 + 4.60 0.000 intron (NR_125907, intron 4 of 5) intron (NR_125907, intron 4 of 5) 22069 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr4-8524 chr4 163048880 163049090 + 4.60 0.000 Intergenic MER44A|DNA|TcMar-Tigger 44643 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr5-6015 chr5 151068864 151069074 + 4.60 0.000 intron (NM_001252390, intron 1 of 17) intron (NM_001252390, intron 1 of 17) -3838 NM_001258456 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr7-7502 chr7 101365161 101365371 + 4.60 0.000 intron (NM_133457, intron 1 of 12) intron (NM_133457, intron 1 of 12) 2391 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr11-7898 chr11 127452840 127453050 + 4.60 0.000 Intergenic Intergenic 181875 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr4-6848 chr4 9078878 9079088 + 4.60 0.000 Intergenic Intergenic -94190 NM_001358418 100287045 NM_001358418 ENSG00000229924 FAM90A26 FAM90A26P family with sequence similarity 90 member A26 protein-coding chr21-1269 chr21 26248614 26248824 + 4.60 0.000 Intergenic AluSz6|SINE|Alu -77591 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr10-8275 chr10 76382039 76382249 + 4.60 0.000 intron (NM_001305581, intron 6 of 6) intron (NM_001305581, intron 6 of 6) -505900 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA ML143361.1-3 ML143361.1 147732 147942 + 4.60 0.000 NA NA NA NA chr14-4456 chr14 33837092 33837302 + 4.60 0.000 Intergenic Intergenic 113877 NM_001308103 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr5-7771 chr5 62124730 62124940 + 4.60 0.000 Intergenic Intergenic -181327 NM_001243953 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr19-5368 chr19 7768720 7768930 + 4.60 0.000 intron (NM_014257, intron 6 of 6) intron (NM_014257, intron 6 of 6) 5582 NM_014257 10332 Hs.421437 NM_014257 ENSG00000104938 CLEC4M CD209L|CD299|DC-SIGN2|DC-SIGNR|DCSIGNR|HP10347|L-SIGN|LSIGN C-type lectin domain family 4 member M protein-coding chrX-2123 chrX 28873466 28873676 + 4.60 0.000 intron (NM_014271, intron 2 of 10) AluY|SINE|Alu 286125 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding chr12-3031 chr12 440998 441208 + 4.60 0.000 intron (NM_001130148, intron 10 of 10) intron (NM_001130148, intron 10 of 10) -18836 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr4-4666 chr4 84499413 84499623 + 4.60 0.000 Intergenic CpG-21330 -1284 NM_006168 4825 Hs.546270 NM_006168 ENSG00000163623 NKX6-1 NKX6.1|NKX6A NK6 homeobox 1 protein-coding chr1-11695 chr1 7653403 7653613 + 4.60 0.000 intron (NM_001349608, intron 6 of 21) AluJb|SINE|Alu -16222 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr19-2201 chr19 32720575 32720785 + 4.60 0.000 intron (NM_001366102, intron 1 of 32) (CCCACC)n|Simple_repeat|Simple_repeat 913 NM_001366102 91646 Hs.646351 NM_001015890 ENSG00000173809 TDRD12 ECAT8 tudor domain containing 12 protein-coding chr5-8244 chr5 110625311 110625521 + 4.60 0.000 exon (NM_001039763, exon 7 of 14) exon (NM_001039763, exon 7 of 14) 101255 NM_001039763 642987 Hs.729154 NM_001039763 ENSG00000186952 TMEM232 - transmembrane protein 232 protein-coding chr4-6480 chr4 150925279 150925489 + 4.60 0.000 intron (NM_001367550, intron 4 of 56) L1M5|LINE|L1 89883 NM_001199282 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr17-6821 chr17 11756140 11756350 + 4.60 0.000 intron (NM_001372, intron 33 of 68) AluYm1|SINE|Alu -126657 NM_004662 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr17-5693 chr17 51299010 51299220 + 4.60 0.000 Intergenic Intergenic 36047 NR_110751 101927274 Hs.591168 NR_110751 ENSG00000249383 LINC02071 - long intergenic non-protein coding RNA 2071 ncRNA chr16-6398 chr16 54178637 54178847 + 4.60 0.000 Intergenic Intergenic 92137 NR_126340 100996338 Hs.232014 NR_126340 LINC02169 - long intergenic non-protein coding RNA 2169 ncRNA chr15-3676 chr15 39501461 39501671 + 4.60 0.000 Intergenic Intergenic -79513 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr18-2460 chr18 38863874 38864084 + 4.60 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 758196 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chrX-2551 chrX 100325970 100326180 + 4.60 0.000 intron (NM_020766, intron 4 of 4) intron (NM_020766, intron 4 of 4) 84198 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chrX-2082 chrX 21651640 21651850 + 4.60 0.000 intron (NM_001168647, intron 20 of 20) intron (NM_001168647, intron 20 of 20) 6585 NM_153270 257240 Hs.448572 NM_153270 ENSG00000185915 KLHL34 - kelch like family member 34 protein-coding chr19-4996 chr19 47001871 47002081 + 4.60 0.000 3' UTR (NM_004491, exon 7 of 7) 3' UTR (NM_004491, exon 7 of 7) -17861 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr1-9236 chr1 23169880 23170090 + 4.60 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -1127 NM_001142546 7798 Hs.257900 NM_033631 ENSG00000169641 LUZP1 LUZP leucine zipper protein 1 protein-coding chr3-10841 chr3 165421259 165421469 + 4.60 0.000 intron (NR_125764, intron 3 of 5) L1MC3|LINE|L1 214404 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr1-12726 chr1 57375625 57375835 + 4.60 0.000 intron (NM_001353980, intron 4 of 5) intron (NM_001353980, intron 4 of 5) 47382 NM_001365793 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr3-8854 chr3 9596767 9596977 + 4.60 0.000 Intergenic AluY|SINE|Alu -43050 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr17-6339 chr17 67640568 67640778 + 4.60 0.000 intron (NM_181671, intron 6 of 9) AluSx1|SINE|Alu -77160 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr5-7146 chr5 2541606 2541816 + 4.60 0.000 Intergenic Intergenic -170880 NR_145480 101234261 NR_145480 ENSG00000281560 LSINCT5 - long stress-induced non-coding transcript 5 ncRNA chr8-4904 chr8 89239037 89239247 + 4.60 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 518569 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr16-5485 chr16 7190683 7190893 + 4.60 0.000 intron (NM_018723, intron 4 of 15) intron (NM_018723, intron 4 of 15) -142057 NM_145892 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr11-8051 chr11 24854576 24854786 + 4.60 0.000 intron (NM_001252010, intron 5 of 9) L1PA7|LINE|L1 357628 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr5-8374 chr5 122852942 122853152 + 4.60 0.000 intron (NM_014035, intron 1 of 6) L2a|LINE|L2 7434 NM_014035 28966 Hs.483200 NM_014035 ENSG00000064652 SNX24 PRO1284|SBBI31 sorting nexin 24 protein-coding chr15-3915 chr15 33412239 33412449 + 4.60 0.000 intron (NM_001243996, intron 1 of 102) intron (NM_001243996, intron 1 of 102) 101377 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chrX-3785 chrX 134467696 134467906 + 4.60 0.000 intron (NM_000194, intron 1 of 8) L2c|LINE|L2 7636 NM_000194 3251 Hs.412707 NM_000194 ENSG00000165704 HPRT1 HGPRT|HPRT hypoxanthine phosphoribosyltransferase 1 protein-coding chr1-15699 chr1 168960655 168960865 + 4.60 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 126245 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr1-9943 chr1 78046157 78046367 + 4.60 0.000 exon (NM_017655, exon 1 of 6) exon (NM_017655, exon 1 of 6) 296 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr4-8606 chr4 171123481 171123691 + 4.60 0.000 Intergenic ERVL-E-int|LTR|ERVL -62598 NR_106730 102466953 NR_106730 ENSG00000278502 MIR6082 hsa-mir-6082 microRNA 6082 ncRNA chr11-10347 chr11 110763536 110763746 + 4.60 0.000 Intergenic Intergenic -50452 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chrX-4996 chrX 117992100 117992310 + 4.60 0.000 intron (NM_001168303, intron 1 of 6) intron (NM_001168303, intron 1 of 6) -6792 NM_001168299 90293 Hs.348262 NM_033495 ENSG00000003096 KLHL13 BKLHD2 kelch like family member 13 protein-coding chrX-3212 chrX 51768204 51768414 + 4.60 0.000 Intergenic MER45C|DNA|hAT-Tip100 24867 NM_018094 23708 Hs.59523 NM_018094 ENSG00000189369 GSPT2 ERF3B|GST2 G1 to S phase transition 2 protein-coding chr10-3909 chr10 70687677 70687887 + 4.60 0.000 intron (NM_080722, intron 2 of 21) SVA_F|Retroposon|SVA 15276 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr15-1240 chr15 72101565 72101775 + 4.60 0.000 intron (NM_006901, intron 1 of 41) SVA_F|Retroposon|SVA -12588 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr18-3018 chr18 26126993 26127203 + 4.60 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -6771 NM_001025097 143471 Hs.464813 NM_144662 ENSG00000154611 PSMA8 PSMA7L proteasome subunit alpha 8 protein-coding chr9-8960 chr9 138082507 138082717 + 4.60 0.000 intron (NM_001243812, intron 35 of 45) MER57B1|LTR|ERV1 -37541 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chrX-4876 chrX 106364220 106364430 + 4.60 0.000 Intergenic Intergenic 196020 NM_152423 139221 Hs.592221 NM_152423 ENSG00000157502 PWWP3B MUM1L1 PWWP domain containing 3B protein-coding chr3-8139 chr3 28309992 28310202 + 4.60 0.000 intron (NM_001331186, intron 3 of 4) L2c|LINE|L2 -38624 NM_001040432 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding chrX-1533 chrX 33432737 33432947 + 4.60 0.000 Intergenic AluY|SINE|Alu -93454 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr3-8743 chr3 197882517 197882727 + 4.60 0.000 non-coding (NR_158582, exon 21 of 21) non-coding (NR_158582, exon 21 of 21) 67303 NM_001134435 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding chr14-4101 chr14 68111910 68112120 + 4.60 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 288423 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chrX-1300 chrX 118807408 118807618 + 4.60 0.000 Intergenic Intergenic -16311 NM_173798 170261 Hs.21417 NM_173798 ENSG00000174460 ZCCHC12 PNMA7A|SIZN|SIZN1 zinc finger CCHC-type containing 12 protein-coding chr11-7924 chr11 1371671 1371881 + 4.60 0.000 Intergenic Intergenic -18158 NR_046331 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr5-7357 chr5 18308329 18308539 + 4.60 0.000 Intergenic Intergenic 501160 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr13-4038 chr13 73572507 73572717 + 4.60 0.000 intron (NR_047009, intron 1 of 2) intron (NR_047009, intron 1 of 2) 8368 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr5-1605 chr5 40617610 40617820 + 4.60 0.000 Intergenic AluSz|SINE|Alu -62200 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr15-3778 chr15 67529871 67530081 + 4.60 0.000 3' UTR (NM_001143936, exon 2 of 2) 3' UTR (NM_001143936, exon 2 of 2) -8132 NR_040052 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr8-4845 chr8 32186759 32186969 + 4.60 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) 160646 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr2-14580 chr2 231917703 231917913 + 4.60 0.000 Intergenic Intergenic 8588 NM_024409 4880 Hs.247916 NM_024409 ENSG00000163273 NPPC CNP|CNP2 natriuretic peptide C protein-coding chr5-3403 chr5 144033210 144033420 + 4.60 0.000 Intergenic Intergenic 137344 NM_001271732 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding chr6-8339 chr6 147422293 147422503 + 4.60 0.000 Intergenic LTR28C|LTR|ERV1 -86292 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr6-7837 chr6 104294210 104294420 + 4.60 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 565231 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr2-10120 chr2 63950971 63951181 + 4.60 0.000 intron (NM_001005739, intron 7 of 22) Tigger2|DNA|TcMar-Tigger 68352 NM_016516 51542 Hs.48499 NM_016516 ENSG00000143952 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L VPS54 subunit of GARP complex protein-coding chr6-6795 chr6 4872109 4872319 + 4.60 0.000 intron (NM_001143970, intron 1 of 6) intron (NM_001143970, intron 1 of 6) -17826 NM_001143971 9425 Hs.269092 NM_004824 ENSG00000153046 CDYL CDYL1 chromodomain Y like protein-coding chr2-10630 chr2 12660764 12660974 + 4.60 0.000 Intergenic MIRb|SINE|MIR -56003 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr19-4892 chr19 40791596 40791806 + 4.60 0.000 intron (NR_037791, intron 7 of 11) AluSz6|SINE|Alu -7490 NM_080732 112398 Hs.515417 NM_017555 ENSG00000269858 EGLN2 EIT-6|EIT6|HIF-PH1|HIFPH1|HPH-1|HPH-3|PHD1 egl-9 family hypoxia inducible factor 2 protein-coding chr12-6775 chr12 8567622 8567832 + 4.60 0.000 Intergenic MER52C|LTR|ERV1 -26822 NM_014358 26253 Hs.236516 NM_014358 ENSG00000166523 CLEC4E CLECSF9|MINCLE C-type lectin domain family 4 member E protein-coding chr22-3876 chr22 34535482 34535692 + 4.60 0.000 Intergenic MSTB1-int|LTR|ERVL-MaLR 462329 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr7-2772 chr7 69406673 69406883 + 4.60 0.000 Intergenic AluYm1|SINE|Alu 190846 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr19-3892 chr19 38523772 38523982 + 4.60 0.000 intron (NM_001042723, intron 69 of 104) intron (NM_001042723, intron 69 of 104) -72470 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chr6-3941 chr6 86234354 86234564 + 4.60 0.000 Intergenic Intergenic -555726 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr6-3499 chr6 20455664 20455874 + 4.60 0.000 intron (NM_001243076, intron 1 of 6) intron (NM_001243076, intron 1 of 6) 52090 NM_001243076 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chr6-8400 chr6 150542676 150542886 + 4.60 0.000 Intergenic Intergenic -57104 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr1-13431 chr1 2914691 2914901 + 4.60 0.000 Intergenic Intergenic -106671 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr10-1953 chr10 17454289 17454499 + 4.60 0.000 non-coding (NR_144322, exon 1 of 7) non-coding (NR_144322, exon 1 of 7) 201 NM_001004470 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr2-10746 chr2 35894759 35894969 + 4.60 0.000 Intergenic L1MA3|LINE|L1 423459 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr8-5118 chr8 65734536 65734746 + 4.60 0.000 intron (NM_001242318, intron 7 of 12) intron (NM_001242318, intron 7 of 12) 54416 NM_002603 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chrX-997 chrX 22328703 22328913 + 4.60 0.000 intron (NR_073010, intron 5 of 11) AluY|SINE|Alu 55895 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr1-9580 chr1 43816594 43816804 + 4.60 0.000 intron (NM_001270460, intron 4 of 10) intron (NM_001270460, intron 4 of 10) -21923 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA chr2-11021 chr2 106562512 106562722 + 4.60 0.000 Intergenic MER58A|DNA|hAT-Charlie 75253 NM_001349727 927 Hs.534308 NM_001349727 ENSG00000232001 CD8B2 CD8BP CD8b2 molecule protein-coding chr22-2385 chr22 49154255 49154465 + 4.60 0.000 Intergenic Intergenic 287590 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chrX-5127 chrX 129701681 129701891 + 4.60 0.000 Intergenic CR1-16_AMi|LINE|CR1 -37193 NM_003399 7512 Hs.170499 NM_003399 ENSG00000122121 XPNPEP2 AEACEI|APP2 X-prolyl aminopeptidase 2 protein-coding chr20-3154 chr20 38893908 38894118 + 4.60 0.000 intron (NM_015568, intron 3 of 10) intron (NM_015568, intron 3 of 10) -32404 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr1-15855 chr1 181483375 181483585 + 4.60 0.000 promoter-TSS (NM_001205294) promoter-TSS (NM_001205294) -37 NM_000721 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr2-4182 chr2 189751337 189751547 + 4.60 0.000 intron (NR_148883, intron 7 of 8) intron (NR_148883, intron 7 of 8) -11338 NR_102429 101409258 Hs.738558 NR_102429 OSGEPL1-AS1 - OSGEPL1 antisense RNA 1 ncRNA chr15-4988 chr15 80099437 80099647 + 4.60 0.000 intron (NM_001242916, intron 2 of 6) intron (NM_001242916, intron 2 of 6) 1126 NM_001242919 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr1-15202 chr1 110211166 110211376 + 4.60 0.000 non-coding (NR_036437, exon 1 of 5) non-coding (NR_036437, exon 1 of 5) 957 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr21-1914 chr21 44891048 44891258 + 4.60 0.000 intron (NM_001303238, intron 11 of 15) intron (NM_001303238, intron 11 of 15) -17250 NR_104597 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF PTTG1 interacting protein protein-coding chr6-5200 chr6 131915104 131915314 + 4.60 0.000 Intergenic Intergenic 36163 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr8-6070 chr8 26149769 26149979 + 4.60 0.000 Intergenic L1MCa|LINE|L1 -104461 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr18-2417 chr18 12863317 12863527 + 4.60 0.000 intron (NM_080423, intron 1 of 8) AluJr|SINE|Alu 20815 NM_002828 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase non-receptor type 2 protein-coding chrX-4026 chrX 17301320 17301530 + 4.60 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -73775 NM_198270 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr15-5211 chr15 95944297 95944507 + 4.60 0.000 Intergenic Intergenic 183439 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr1-5901 chr1 9080870 9081080 + 4.60 0.000 Intergenic AluJb|SINE|Alu -8716 NM_001328619 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr14-5383 chr14 103981812 103982022 + 4.60 0.000 intron (NM_153046, intron 7 of 35) intron (NM_153046, intron 7 of 35) -39388 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr4-6435 chr4 135386024 135386234 + 4.60 0.000 Intergenic LTR27E|LTR|ERV1 -262570 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr10-8456 chr10 86851191 86851401 + 4.60 0.000 intron (NM_004329, intron 2 of 12) intron (NM_004329, intron 2 of 12) 94657 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr5-7212 chr5 7915574 7915784 + 4.60 0.000 Intergenic Intergenic 46531 NM_001364440 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chr10-8879 chr10 113259904 113260114 + 4.60 0.000 Intergenic Intergenic 130738 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr16-4414 chr16 50984170 50984380 + 4.60 0.000 intron (NR_039672, intron 2 of 6) Kanga1c|DNA|TcMar-Tc2 -33483 NR_110913 101927334 Hs.555184 NR_110913 ENSG00000261637 LINC02127 - long intergenic non-protein coding RNA 2127 ncRNA chr2-12828 chr2 95060411 95060621 + 4.60 0.000 Intergenic Intergenic 34808 NM_002371 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr2-6703 chr2 26149618 26149828 + 4.60 0.000 Intergenic Intergenic -23365 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr13-3225 chr13 27284129 27284339 + 4.60 0.000 Intergenic Intergenic 13057 NM_001331126 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr19-5217 chr19 32140758 32140968 + 4.60 0.000 Intergenic Intergenic -34947 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LINC01782 - long intergenic non-protein coding RNA 1782 ncRNA chr11-10304 chr11 107549443 107549653 + 4.60 0.000 intron (NM_138775, intron 7 of 11) intron (NM_138775, intron 7 of 11) 16187 NM_001301010 91801 Hs.503763 NM_138775 ENSG00000137760 ALKBH8 ABH8|TRM9|TRMT9|TRMT9A alkB homolog 8, tRNA methyltransferase protein-coding chr1-13621 chr1 9792574 9792784 + 4.60 0.000 intron (NM_001009566, intron 1 of 18) intron (NM_001009566, intron 1 of 18) 31847 NM_014944 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr21-1130 chr21 37729867 37730077 + 4.60 0.000 intron (NM_002240, intron 2 of 3) MIR3|SINE|MIR 186485 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr9-6428 chr9 73406947 73407157 + 4.60 0.000 Intergenic L1MB2|LINE|L1 255187 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr13-4013 chr13 71454625 71454835 + 4.60 0.000 intron (NM_080759, intron 10 of 10) MLT1F2|LTR|ERVL-MaLR 412462 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr2-13719 chr2 167484386 167484596 + 4.60 0.000 Intergenic MER4D|LTR|ERV1 297119 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr12-5834 chr12 39181008 39181218 + 4.60 0.000 Intergenic Intergenic 262007 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr8-5255 chr8 132893040 132893250 + 4.60 0.000 intron (NM_003235, intron 10 of 47) (GT)n|Simple_repeat|Simple_repeat 26187 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr18-3213 chr18 46646490 46646700 + 4.60 0.000 intron (NM_144612, intron 2 of 39) intron (NM_144612, intron 2 of 39) 10438 NM_144612 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr3-10402 chr3 129966332 129966542 + 4.60 0.000 Intergenic Intergenic -8283 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chrX-4010 chrX 16571631 16571841 + 4.60 0.000 Intergenic MER33|DNA|hAT-Charlie 55349 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr5-6851 chr5 116893223 116893433 + 4.60 0.000 Intergenic Intergenic -131119 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr15-3795 chr15 70005976 70006186 + 4.60 0.000 Intergenic MIRc|SINE|MIR 73387 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr12-5284 chr12 110651866 110652076 + 4.60 0.000 intron (NM_001040107, intron 5 of 7) FLAM_A|SINE|Alu 37144 NM_032369 84329 Hs.211511 NM_032369 ENSG00000122986 HVCN1 HV1|VSOP hydrogen voltage gated channel 1 protein-coding chr9-7835 chr9 83211443 83211653 + 4.60 0.000 Intergenic Intergenic 55720 NM_001244962 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr2-11801 chr2 16669727 16669937 + 4.60 0.000 Intergenic L2c|LINE|L2 -3998 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr9-6889 chr9 88575116 88575326 + 4.60 0.000 3' UTR (NM_145283, exon 3 of 3) 3' UTR (NM_145283, exon 3 of 3) 40043 NM_145283 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr20-3887 chr20 31364818 31365028 + 4.60 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -3678 NM_054112 117285 Hs.274124 NM_054112 ENSG00000131068 DEFB118 C20orf63|DEFB-18|ESC42|ESP13.6 defensin beta 118 protein-coding chr1-16114 chr1 204431691 204431901 + 4.60 0.000 intron (NM_002646, intron 28 of 33) intron (NM_002646, intron 28 of 33) -19979 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr6-4123 chr6 158319469 158319679 + 4.60 0.000 intron (NM_020245, intron 1 of 13) intron (NM_020245, intron 1 of 13) -3408 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr9-7584 chr9 36250185 36250395 + 4.60 0.000 intron (NM_001128227, intron 1 of 11) intron (NM_001128227, intron 1 of 11) 8158 NM_001190384 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding chr7-7482 chr7 98400862 98401072 + 4.60 0.000 5' UTR (NM_018842, exon 1 of 14) 5' UTR (NM_018842, exon 1 of 14) 123 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr5-6124 chr5 32002811 32003021 + 4.60 0.000 intron (NM_178140, intron 5 of 24) (AC)n|Simple_repeat|Simple_repeat -66757 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr12-5365 chr12 119156514 119156724 + 4.60 0.000 exon (NM_194286, exon 13 of 13) exon (NM_194286, exon 13 of 13) 19865 NR_134996 105370024 Hs.679286 NR_134996 ENSG00000256884 LOC105370024 - uncharacterized LOC105370024 ncRNA chr3-6991 chr3 169604038 169604248 + 4.60 0.000 intron (NM_001366473, intron 1 of 15) intron (NM_001366473, intron 1 of 15) 59569 NM_001366466 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr7-6954 chr7 98763672 98763882 + 4.60 0.000 Intergenic Intergenic 106237 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr19-5221 chr19 34567641 34567851 + 4.60 0.000 Intergenic L1PA7|LINE|L1 -22360 NR_146880 100129800 NR_146880 ZNF807 ZNF181P1|ZNF807P zinc finger protein 807 pseudo chr22-3536 chr22 11616148 11616358 + 4.60 0.000 Intergenic (TCTC)n|Simple_repeat|Simple_repeat -281153 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr7-9404 chr7 131674166 131674376 + 4.60 0.000 Intergenic Intergenic -117643 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr4-6916 chr4 15951659 15951869 + 4.60 0.000 Intergenic Intergenic 11411 NM_031950 83888 Hs.98785 NM_031950 ENSG00000137441 FGFBP2 HBP17RP|KSP37 fibroblast growth factor binding protein 2 protein-coding chrX-5004 chrX 118710002 118710212 + 4.60 0.000 Intergenic L2a|LINE|L2 -17499 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr14-3269 chr14 79331120 79331330 + 4.60 0.000 intron (NM_001105250, intron 1 of 6) intron (NM_001105250, intron 1 of 6) 51845 NM_001105250 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chrX-3704 chrX 112415766 112415976 + 4.60 0.000 intron (NM_001004308, intron 2 of 2) MIRb|SINE|MIR 264067 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr3-9099 chr3 28335198 28335408 + 4.60 0.000 intron (NM_022461, intron 5 of 7) intron (NM_022461, intron 5 of 7) -13418 NM_001040432 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding chr9-7611 chr9 37459308 37459518 + 4.60 0.000 intron (NM_014872, intron 1 of 1) AluSp|SINE|Alu 6037 NM_014872 9925 Hs.161276 NM_014872 ENSG00000168795 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding chr1-9021 chr1 11554392 11554602 + 4.60 0.000 Intergenic Intergenic -55034 NR_104624 101929181 Hs.568616 NR_104624 ENSG00000235643 LINC01647 - long intergenic non-protein coding RNA 1647 ncRNA chr7-3903 chr7 116210410 116210620 + 4.60 0.000 promoter-TSS (NM_015641) promoter-TSS (NM_015641) -24 NM_015641 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr1-10625 chr1 179712555 179712765 + 4.60 0.000 Intergenic AluSz6|SINE|Alu -15116 NM_001329714 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding chr5-7297 chr5 14472969 14473179 + 4.60 0.000 intron (NM_007118, intron 39 of 56) intron (NM_007118, intron 39 of 56) 9091 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr9-6332 chr9 3577517 3577727 + 4.60 0.000 Intergenic Intergenic -51621 NM_134428 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr13-2296 chr13 30893244 30893454 + 4.60 0.000 intron (NR_038287, intron 2 of 3) intron (NR_038287, intron 2 of 3) 10787 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr2-12747 chr2 84846058 84846268 + 4.60 0.000 intron (NM_001307978, intron 2 of 4) intron (NM_001307978, intron 2 of 4) 34921 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr7-8069 chr7 23774164 23774374 + 4.60 0.000 intron (NM_031414, intron 15 of 23) L1PA6|LINE|L1 64050 NM_032944 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr20-3094 chr20 24626039 24626249 + 4.60 0.000 intron (NM_024893, intron 3 of 3) SVA_D|Retroposon|SVA 156183 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr7-8643 chr7 70593812 70594022 + 4.60 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -538227 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr3-8094 chr3 13752731 13752941 + 4.60 0.000 Intergenic Intergenic 102115 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr3-10861 chr3 168165529 168165739 + 4.60 0.000 Intergenic Intergenic -69710 NM_001308155 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr1-6452 chr1 18042166 18042376 + 4.60 0.000 Intergenic Intergenic -23386 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr14-4064 chr14 60191230 60191440 + 4.60 0.000 Intergenic Intergenic -21471 NM_001322280 51635 Hs.59719 NM_016029 ENSG00000100612 DHRS7 CGI-86|SDR34C1|retDSR4|retSDR4 dehydrogenase/reductase 7 protein-coding chr5-7076 chr5 173547514 173547724 + 4.60 0.000 Intergenic Intergenic -32015 NR_027109 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr6-8545 chr6 161376535 161376745 + 4.60 0.000 intron (NM_004562, intron 10 of 11) intron (NM_004562, intron 10 of 11) -94337 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr5-9177 chr5 178242487 178242697 + 4.60 0.000 intron (NM_173465, intron 25 of 28) intron (NM_173465, intron 25 of 28) -9770 NM_001278346 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr14-4691 chr14 57335266 57335476 + 4.60 0.000 Intergenic MLT2A1|LTR|ERVL -55215 NM_001011713 122830 Hs.165465 NM_001011713 ENSG00000139977 NAA30 C14orf35|MAK3|Mak3p|NAT12|NAT12P N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding chr11-10068 chr11 84843946 84844156 + 4.60 0.000 intron (NM_001351274, intron 5 of 26) (TA)n|Simple_repeat|Simple_repeat 79370 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr13-4467 chr13 113092355 113092565 + 4.60 0.000 intron (NM_001320815, intron 27 of 30) intron (NM_001320815, intron 27 of 30) -13328 NM_000131 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr6-5852 chr6 35617539 35617749 + 4.60 0.000 intron (NM_001145775, intron 6 of 11) intron (NM_001145775, intron 6 of 11) 47145 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr1-15963 chr1 191928673 191928883 + 4.60 0.000 Intergenic L1MA1|LINE|L1 -229684 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr11-8969 chr11 20667070 20667280 + 4.60 0.000 Intergenic Intergenic -2376 NM_001288714 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr1-12471 chr1 18015321 18015531 + 4.60 0.000 Intergenic Intergenic -50231 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr7-6913 chr7 76061452 76061662 + 4.60 0.000 intron (NM_005918, intron 5 of 8) FRAM|SINE|Alu 13451 NM_001282404 4191 Hs.520967 NM_005918 ENSG00000146701 MDH2 EIEE51|M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2 protein-coding chr18-1498 chr18 78450941 78451151 + 4.60 0.000 Intergenic Intergenic -457319 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr13-3431 chr13 101751517 101751727 + 4.60 0.000 intron (NM_175929, intron 3 of 4) MER58A|DNA|hAT-Charlie 165023 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chrY-23 chrY 10986804 10987014 + 4.60 0.000 Intergenic Intergenic 1076111 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 ncRNA chr3-10140 chr3 114257543 114257753 + 4.60 0.000 Intergenic L1MA3|LINE|L1 -20070 NM_007136 7634 Hs.271079 NM_007136 ENSG00000174255 ZNF80 pT17 zinc finger protein 80 protein-coding chr12-7606 chr12 79052224 79052434 + 4.60 0.000 intron (NM_005639, intron 3 of 10) L1PA4|LINE|L1 6637 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr2-10295 chr2 132302433 132302643 + 4.60 0.000 Intergenic AluSx3|SINE|Alu -2254 NM_001355461 646915 NM_001304449 ZNF806 - zinc finger protein 806 protein-coding chr4-7025 chr4 25955232 25955442 + 4.60 0.000 Intergenic Intergenic 41145 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr3-7675 chr3 39472844 39473054 + 4.60 0.000 intron (NR_103506, intron 1 of 2) AluJb|SINE|Alu 5269 NR_003090 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr4-5829 chr4 101851513 101851723 + 4.60 0.000 intron (NM_017935, intron 2 of 16) intron (NM_017935, intron 2 of 16) 37776 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr13-2852 chr13 109936611 109936821 + 4.60 0.000 Intergenic MLT2C1|LTR|ERVL -116569 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr16-4811 chr16 86242322 86242532 + 4.60 0.000 intron (NR_104139, intron 3 of 5) intron (NR_104139, intron 3 of 5) 43820 NR_104139 101154687 Hs.640512 NR_104139 LINC01081 TCONS00024764|TCONS_00024764 long intergenic non-protein coding RNA 1081 ncRNA chr17-5165 chr17 9717931 9718141 + 4.60 0.000 intron (NM_001267576, intron 14 of 14) AluSc|SINE|Alu 72499 NM_001267576 124739 Hs.709621 NM_153210 ENSG00000154914 USP43 - ubiquitin specific peptidase 43 protein-coding chr5-7565 chr5 40018134 40018344 + 4.60 0.000 Intergenic MLT1B-int|LTR|ERVL-MaLR -34052 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr5-7253 chr5 11256549 11256759 + 4.60 0.000 intron (NM_001288715, intron 8 of 20) intron (NM_001288715, intron 8 of 20) 332263 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chrX-1536 chrX 36107675 36107885 + 4.60 0.000 intron (NM_001304548, intron 33 of 63) intron (NM_001304548, intron 33 of 63) 188046 NM_001304548 286464 Hs.376425 NM_152632 ENSG00000165164 CFAP47 CHDC2|CXorf22|CXorf30|CXorf59 cilia and flagella associated protein 47 protein-coding chr6-7293 chr6 43661940 43662150 + 4.60 0.000 intron (NM_152732, intron 4 of 4) AluJo|SINE|Alu 17009 NM_152732 221421 Hs.534585 NM_152732 ENSG00000172426 RSPH9 C6orf206|CILD12|MRPS18AL1 radial spoke head 9 homolog protein-coding chr15-2443 chr15 75320781 75320991 + 4.60 0.000 Intergenic AluSp|SINE|Alu -15177 NM_001321847 54939 Hs.351327 NM_017828 ENSG00000140365 COMMD4 - COMM domain containing 4 protein-coding chr10-7649 chr10 25530075 25530285 + 4.60 0.000 intron (NM_020752, intron 5 of 10) intron (NM_020752, intron 5 of 10) -121532 NR_108068 101929052 Hs.128298 NR_108067 ENSG00000280809 LINC00836 - long intergenic non-protein coding RNA 836 ncRNA chr20-3096 chr20 24896460 24896670 + 4.60 0.000 Intergenic Intergenic -52704 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr3-9279 chr3 41841201 41841411 + 4.60 0.000 intron (NR_136342, intron 16 of 34) SVA_A|Retroposon|SVA 120797 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr11-6109 chr11 36741441 36741651 + 4.60 0.000 Intergenic Intergenic -143267 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr4-4941 chr4 126045169 126045379 + 4.60 0.000 Intergenic MLT2B1|LTR|ERVL 538015 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chrX-5412 chrX 153226558 153226768 + 4.60 0.000 Intergenic Intergenic 47379 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chr16-5648 chr16 67100425 67100635 + 4.60 0.000 3' UTR (NM_001368710, exon 5 of 5) 3' UTR (NM_001368710, exon 5 of 5) -9411 NM_001320540 80262 Hs.513666 NM_025187 ENSG00000125149 C16orf70 C16orf6|LIN10|lin-10 chromosome 16 open reading frame 70 protein-coding chr11-8321 chr11 76273115 76273325 + 4.60 0.000 Intergenic AluSz6|SINE|Alu -66718 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr18-2368 chr18 60106463 60106673 + 4.60 0.000 Intergenic L1PA15|LINE|L1 206572 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr17-6288 chr17 44192178 44192388 + 4.60 0.000 TTS (NR_148386) TTS (NR_148386) 5080 NM_001353184 79089 Hs.181391 NM_024107 ENSG00000168591 TMUB2 FP2653 transmembrane and ubiquitin like domain containing 2 protein-coding chr2-11469 chr2 231747858 231748068 + 4.60 0.000 intron (NM_002601, intron 1 of 4) THE1A|LTR|ERVL-MaLR 33319 NR_110994 5147 Hs.516808 NM_002601 ENSG00000156973 PDE6D JBTS22|PDED phosphodiesterase 6D protein-coding chr1-11770 chr1 22114219 22114429 + 4.60 0.000 Intergenic Intergenic 28773 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr11-10752 chr11 133663541 133663751 + 4.60 0.000 Intergenic Intergenic -131145 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr2-10151 chr2 77953730 77953940 + 4.60 0.000 intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) 1191 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA chr1-14300 chr1 38789576 38789786 + 4.60 0.000 Intergenic Intergenic 70091 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr5-4085 chr5 64901480 64901690 + 4.60 0.000 intron (NM_005869, intron 11 of 13) Tigger3b|DNA|TcMar-Tigger 132655 NM_005869 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr16-5940 chr16 3712335 3712545 + 4.60 0.000 intron (NM_016292, intron 1 of 17) intron (NM_016292, intron 1 of 17) 5084 NM_016292 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr18-3037 chr18 27618388 27618598 + 4.60 0.000 Intergenic Intergenic -275837 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr6-8080 chr6 124764544 124764754 + 4.60 0.000 intron (NM_001040214, intron 4 of 6) intron (NM_001040214, intron 4 of 6) -197896 NM_001286398 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr5-7054 chr5 170184248 170184458 + 4.60 0.000 Intergenic Intergenic 14788 NR_108022 100507267 Hs.634846 NR_108022 LINC01187 CTB-27N1.1|KIDR long intergenic non-protein coding RNA 1187 ncRNA chr18-3468 chr18 69658806 69659016 + 4.60 0.000 intron (NM_152721, intron 3 of 7) intron (NM_152721, intron 3 of 7) 188980 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr6-5430 chr6 157434534 157434744 + 4.60 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 53449 NM_153746 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr18-1414 chr18 3498926 3499136 + 4.60 0.000 3' UTR (NM_001242764, exon 10 of 10) 3' UTR (NM_001242764, exon 10 of 10) 32781 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr14-4792 chr14 65403089 65403299 + 4.60 0.000 Intergenic MIR|SINE|MIR -7398 NM_178155 2530 Hs.597649 NM_004480 ENSG00000033170 FUT8 CDGF|CDGF1 fucosyltransferase 8 protein-coding chr2-11109 chr2 130850861 130851071 + 4.60 0.000 intron (NM_001367493, intron 1 of 13) intron (NM_001367493, intron 1 of 13) 14052 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr8-5657 chr8 111799741 111799951 + 4.60 0.000 Intergenic HERV16-int|LTR|ERVL 423207 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr13-4076 chr13 76840031 76840241 + 4.60 0.000 Intergenic Intergenic 46269 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr18-3173 chr18 43410248 43410458 + 4.60 0.000 Intergenic AluJo|SINE|Alu -132863 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr3-8349 chr3 76341276 76341486 + 4.60 0.000 Intergenic MER58C|DNA|hAT-Charlie -555832 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr10-9147 chr10 128100727 128100937 + 4.60 0.000 intron (NM_001145966, intron 13 of 13) intron (NM_001145966, intron 13 of 13) 25591 NM_001145966 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chr1-13429 chr1 2855912 2856122 + 4.60 0.000 Intergenic CpG -55149 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr7-6603 chr7 98807767 98807977 + 4.60 0.000 Intergenic Intergenic 62142 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr8-3321 chr8 30647808 30648018 + 4.60 0.000 intron (NM_001348353, intron 2 of 6) L2b|LINE|L2 9333 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chrX-3026 chrX 71450091 71450301 + 4.60 0.000 intron (NR_104394, intron 33 of 39) intron (NR_104394, intron 33 of 39) 42253 NR_002226 27160 Hs.721806 NR_002226 ENSG00000243468 INGX ING1-like|ING2 inhibitor of growth family, X-linked (pseudogene) pseudo chr1-14468 chr1 47645122 47645332 + 4.60 0.000 Intergenic Intergenic -207910 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr12-7304 chr12 53973903 53974113 + 4.60 0.000 intron (NM_014212, intron 1 of 1) CpG 882 NM_014212 3227 Hs.127562 NM_014212 ENSG00000123388 HOXC11 HOX3H homeobox C11 protein-coding chr11-7062 chr11 120581572 120581782 + 4.60 0.000 intron (NM_001282470, intron 1 of 19) L1MB2|LINE|L1 17241 NM_001282473 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr12-7723 chr12 91670245 91670455 + 4.60 0.000 Intergenic HAL1|LINE|L1 471363 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr10-5098 chr10 47329540 47329750 + 4.60 0.000 Intergenic Intergenic 7191 NM_016204 2658 Hs.279463 NM_016204 ENSG00000263761 GDF2 BMP-9|BMP9|HHT5 growth differentiation factor 2 protein-coding chr8-2383 chr8 48008280 48008490 + 4.60 0.000 promoter-TSS (NM_003350) promoter-TSS (NM_003350) -46 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr3-9164 chr3 33623574 33623784 + 4.60 0.000 intron (NM_001365634, intron 10 of 35) L1MA4|LINE|L1 36000 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chrX-4698 chrX 86456053 86456263 + 4.60 0.000 intron (NM_001139515, intron 2 of 11) L1PA11|LINE|L1 193190 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr1-9936 chr1 76793393 76793603 + 4.60 0.000 Intergenic Intergenic -14231 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr8-6567 chr8 69711199 69711409 + 4.60 0.000 intron (NM_001146009, intron 3 of 7) intron (NM_001146009, intron 3 of 7) 118404 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr5-8307 chr5 115558113 115558323 + 4.60 0.000 Intergenic Intergenic -13443 NM_020177 56929 Hs.47367 NM_020177 ENSG00000145780 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog C protein-coding chr8-5565 chr8 79697026 79697236 + 4.60 0.000 Intergenic AluSx1|SINE|Alu 69344 NM_001282851 23462 Hs.234434 NM_012258 ENSG00000164683 HEY1 BHLHb31|CHF2|HERP2|HESR1|HRT-1|NERP2|OAF1|hHRT1 hes related family bHLH transcription factor with YRPW motif 1 protein-coding chr2-11192 chr2 157144328 157144538 + 4.60 0.000 Intergenic L1PB1|LINE|L1 -113272 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr1-13026 chr1 164320863 164321073 + 4.60 0.000 Intergenic Intergenic -238392 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr2-10432 chr2 202711477 202711687 + 4.60 0.000 intron (NM_173511, intron 2 of 7) L1MA3|LINE|L1 76613 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr2-13894 chr2 180917500 180917710 + 4.60 0.000 TTS (NR_104320) TTS (NR_104320) -62780 NM_001278555 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr2-13409 chr2 141172104 141172314 + 4.60 0.000 intron (NM_018557, intron 7 of 90) intron (NM_018557, intron 7 of 90) -585524 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr5-7007 chr5 154830023 154830233 + 4.60 0.000 TTS (NR_039667) TTS (NR_039667) 670 NR_039667 100616306 NR_039667 ENSG00000263361 MIR378H - microRNA 378h ncRNA chr9-3258 chr9 19567456 19567666 + 4.60 0.000 intron (NM_020344, intron 6 of 9) AluY|SINE|Alu 158552 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chrX-4279 chrX 41822352 41822562 + 4.60 0.000 intron (NM_003688, intron 2 of 26) AluSx|SINE|Alu 98276 NM_080817 27197 Hs.567457 NM_080817 ENSG00000171657 GPR82 - G protein-coupled receptor 82 protein-coding chr4-7251 chr4 46839539 46839749 + 4.60 0.000 intron (NM_130902, intron 2 of 2) MamTip2|DNA|hAT-Tip100 69601 NM_130902 170712 Hs.479656 NM_130902 ENSG00000170516 COX7B2 - cytochrome c oxidase subunit 7B2 protein-coding chr8-5454 chr8 41683089 41683299 + 4.60 0.000 intron (NM_020475, intron 37 of 41) intron (NM_020475, intron 37 of 41) -17920 NM_020480 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr3-9642 chr3 60080653 60080863 + 4.60 0.000 intron (NR_135491, intron 1 of 6) intron (NR_135491, intron 1 of 6) 151 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr12-5430 chr12 122578414 122578624 + 4.60 0.000 intron (NM_014708, intron 31 of 63) AluSx1|SINE|Alu 51270 NM_014708 9735 Hs.300559 NM_014708 ENSG00000184445 KNTC1 ROD kinetochore associated 1 protein-coding chr9-3453 chr9 504468 504678 + 4.60 0.000 promoter-TSS (NM_015158) promoter-TSS (NM_015158) 18 NM_001354331 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr2-14248 chr2 212523464 212523674 + 4.60 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 15059 NM_001042599 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr2-10435 chr2 203507897 203508107 + 4.60 0.000 intron (NM_001329728, intron 1 of 15) AluY|SINE|Alu 27299 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr12-4475 chr12 16352446 16352656 + 4.60 0.000 promoter-TSS (NM_145764) promoter-TSS (NM_145764) -866 NM_145764 4257 Hs.389700 NM_020300 ENSG00000008394 MGST1 GST12|MGST|MGST-I microsomal glutathione S-transferase 1 protein-coding chr15-5266 chr15 99008297 99008507 + 4.60 0.000 promoter-TSS (NM_001167902) promoter-TSS (NM_001167902) -610 NM_001167902 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr18-2672 chr18 53899058 53899268 + 4.60 0.000 Intergenic L2b|LINE|L2 -318104 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr1-9369 chr1 29857546 29857756 + 4.60 0.000 Intergenic Intergenic 179961 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chrX-1899 chrX 135689084 135689294 + 4.60 0.000 Intergenic Intergenic -3095 NR_147090 644717 Hs.556140 NR_147090 SAGE2P - sarcoma antigen 2, pseudogene pseudo chr18-2905 chr18 11773156 11773366 + 4.60 0.000 intron (NM_001369387, intron 4 of 11) intron (NM_001369387, intron 4 of 11) 21176 NM_001369387 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr16-4714 chr16 82341383 82341593 + 4.60 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -171264 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr16-5248 chr16 48195247 48195457 + 4.60 0.000 intron (NM_001370497, intron 18 of 29) L2b|LINE|L2 36919 NM_033151 85320 Hs.652267 NM_032583 ENSG00000121270 ABCC11 EWWD|MRP8|WW ATP binding cassette subfamily C member 11 protein-coding chrX-5163 chrX 132392539 132392749 + 4.60 0.000 intron (NM_001170704, intron 3 of 8) intron (NM_001170704, intron 3 of 8) 20931 NM_001170702 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr7-7399 chr7 71985473 71985683 + 4.60 0.000 intron (NM_001363460, intron 4 of 5) L1ME3Cz|LINE|L1 351813 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr16-6322 chr16 49108278 49108488 + 4.60 0.000 Intergenic MIRb|SINE|MIR 173455 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding chr14-5000 chr14 76799144 76799354 + 4.60 0.000 intron (NM_001370747, intron 9 of 11) intron (NM_001370747, intron 9 of 11) -12525 NR_104183 100506603 Hs.673984 NR_104183 ENSG00000258301 VASH1-AS1 - VASH1 antisense RNA 1 ncRNA chr2-10460 chr2 215602472 215602682 + 4.60 0.000 Intergenic Intergenic -115466 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr1-10249 chr1 118025460 118025670 + 4.60 0.000 intron (NM_206996, intron 26 of 48) AluJr|SINE|Alu 95826 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding chr4-3521 chr4 155104318 155104528 + 4.60 0.000 Intergenic AluSz|SINE|Alu -104213 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr12-6230 chr12 29158067 29158277 + 4.60 0.000 intron (NM_001271783, intron 1 of 11) intron (NM_001271783, intron 1 of 11) 8894 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr1-14011 chr1 26331455 26331665 + 4.60 0.000 exon (NM_001039775, exon 15 of 20) exon (NM_001039775, exon 15 of 20) -13295 NM_145345 91544 Hs.145061 NM_145345 ENSG00000158062 UBXN11 COA-1|PP2243|SOC|SOCI|UBXD5 UBX domain protein 11 protein-coding chr4-5452 chr4 28117031 28117241 + 4.60 0.000 Intergenic LTR12C|LTR|ERV1 -702446 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr11-10709 chr11 130640739 130640949 + 4.60 0.000 Intergenic Intergenic -25891 NR_107019 102466873 NR_107019 ENSG00000274999 MIR8052 hsa-mir-8052 microRNA 8052 ncRNA chr6-5933 chr6 70427448 70427658 + 4.60 0.000 intron (NM_001351602, intron 3 of 21) L1ME4a|LINE|L1 -13595 NR_147708 105377849 Hs.669000 NR_147708 ENSG00000224349 LOC105377849 - uncharacterized LOC105377849 ncRNA chr4-8746 chr4 185951008 185951218 + 4.60 0.000 intron (NM_001270771, intron 1 of 23) intron (NM_001270771, intron 1 of 23) 5259 NM_021069 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chrX-1656 chrX 144721431 144721641 + 4.60 0.000 Intergenic MER61-int|LTR|ERV1 -525967 NM_001009614 494118 NM_001009614 ENSG00000203923 SPANXN1 CT11.6 SPANX family member N1 protein-coding chr15-2575 chr15 57364511 57364721 + 4.60 0.000 Intergenic Intergenic -11889 NM_032866 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr3-9283 chr3 42222966 42223176 + 4.60 0.000 non-coding (NR_146089, exon 17 of 17) non-coding (NR_146089, exon 17 of 17) 40876 NM_001174138 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr2-13624 chr2 159647297 159647507 + 4.60 0.000 Intergenic MLT2B4|LTR|ERVL -30801 NM_001289975 29994 Hs.470369 NM_013450 ENSG00000123636 BAZ2B WALp4 bromodomain adjacent to zinc finger domain 2B protein-coding chr1-15344 chr1 121553311 121553521 + 4.60 0.000 intron (NR_003955, intron 1 of 7) AluJo|SINE|Alu 34304 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo chr19-6216 chr19 6001727 6001937 + 4.60 0.000 exon (NM_134433, exon 14 of 17) exon (NM_134433, exon 14 of 17) 23429 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA chr6-3510 chr6 27827211 27827421 + 4.60 0.000 Intergenic SVA_D|Retroposon|SVA 3191 NM_021968 8363 Hs.278483 NM_021968 ENSG00000197238 HIST1H4J H4/e|H4F2iv|H4FE|dJ160A22.2 histone cluster 1 H4 family member j protein-coding chr18-2286 chr18 76908221 76908431 + 4.60 0.000 exon (NM_007345, exon 14 of 31) exon (NM_007345, exon 14 of 31) 84166 NM_007345 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr7-6686 chr7 157299428 157299638 + 4.60 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -37471 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr9-7895 chr9 88085186 88085396 + 4.60 0.000 Intergenic Intergenic -7391 NR_135138 102724156 Hs.633031 NR_135137 LOC102724156 - uncharacterized LOC102724156 ncRNA chr13-4448 chr13 112580943 112581153 + 4.60 0.000 intron (NM_006322, intron 1 of 21) L2b|LINE|L2 7105 NM_006322 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chrX-4691 chrX 85852534 85852744 + 4.60 0.000 Intergenic MER1B|DNA|hAT-Charlie 16859 NR_031710 100302171 NR_031710 ENSG00000283435 MIR1321 MIRN1321|hsa-mir-1321 microRNA 1321 ncRNA chr1-12864 chr1 103411079 103411289 + 4.60 0.000 Intergenic Intergenic 114327 NM_001286997 101928436 Hs.558999 NM_001286997 LOC101928436 - uncharacterized LOC101928436 protein-coding chr9-6408 chr9 36842335 36842545 + 4.60 0.000 intron (NM_001280550, intron 6 of 6) intron (NM_001280550, intron 6 of 6) -18841 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr3-8301 chr3 60310675 60310885 + 4.60 0.000 intron (NM_001320900, intron 6 of 9) L1MC4|LINE|L1 -229871 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr10-7104 chr10 96446519 96446729 + 4.60 0.000 intron (NM_012465, intron 2 of 20) intron (NM_012465, intron 2 of 20) 67302 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chrX-4944 chrX 111554765 111554975 + 4.48 0.000 Intergenic L1MD2|LINE|L1 43225 NM_001354473 401613 Hs.98581 NM_001354473 ENSG00000260802 SERTM2 DKFZp686D0853|LINC00890 serine rich and transmembrane domain containing 2 protein-coding chr19-6409 chr19 14369897 14370107 + 4.48 0.000 Intergenic Intergenic -6012 NR_134908 105372288 Hs.628463 NR_134908 ENSG00000266913 LINC01841 - long intergenic non-protein coding RNA 1841 ncRNA chr3-9673 chr3 63163794 63164004 + 4.48 0.000 Intergenic L1PA15|LINE|L1 61211 NR_027104 285401 Hs.211125 NR_027104 ENSG00000244342 LINC00698 - long intergenic non-protein coding RNA 698 ncRNA chr5-7215 chr5 8294851 8295061 + 4.48 0.000 Intergenic MER65D|LTR|ERV1 162608 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr22-3835 chr22 31869142 31869352 + 4.48 0.000 intron (NR_146296, intron 33 of 42) AluJo|SINE|Alu 69207 NM_001302820 25775 Hs.627602 NM_015372 ENSG00000128254 C22orf24 HSN44A4A chromosome 22 open reading frame 24 protein-coding chr13-3226 chr13 27354004 27354214 + 4.48 0.000 Intergenic Intergenic -70510 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr5-3831 chr5 106009627 106009837 + 4.48 0.000 Intergenic L1PA15|LINE|L1 910258 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr15-5034 chr15 83414858 83415068 + 4.48 0.000 Intergenic Intergenic -32265 NM_001301109 6457 Hs.270055 NM_003027 ENSG00000140600 SH3GL3 CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13 SH3 domain containing GRB2 like 3, endophilin A3 protein-coding chr1-8365 chr1 63251273 63251483 + 4.48 0.000 intron (NR_038252, intron 4 of 11) AluJr|SINE|Alu 65879 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA chr19-5961 chr19 421556 421766 + 4.48 0.000 intron (NM_012435, intron 11 of 12) intron (NM_012435, intron 11 of 12) -12514 NM_001136263 126567 Hs.223770 NM_001136263 ENSG00000183186 C2CD4C FAM148C|KIAA1957|NLF3 C2 calcium dependent domain containing 4C protein-coding chr1-9575 chr1 42993771 42993981 + 4.48 0.000 Intergenic Intergenic 34827 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr5-8673 chr5 140912419 140912629 + 4.48 0.000 intron (NM_018904, intron 1 of 3) L1M1|LINE|L1 -14193 NM_031882 56135 Hs.199343 NM_018898 ENSG00000248383 PCDHAC1 PCDH-ALPHA-C1 protocadherin alpha subfamily C, 1 protein-coding chr16-5034 chr16 56771592 56771802 + 4.48 0.000 intron (NM_014669, intron 3 of 21) intron (NM_014669, intron 3 of 21) -10132 NM_001242795 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr15-4104 chr15 76735632 76735842 + 4.48 0.000 intron (NR_148227, intron 15 of 32) HAL1b|LINE|L1 126207 NM_001145923 49855 Hs.458986 NM_020843 ENSG00000140386 SCAPER IDDRP|MSTP063|ZNF291|Zfp291 S-phase cyclin A associated protein in the ER protein-coding chrX-4440 chrX 54927328 54927538 + 4.48 0.000 TTS (NR_145717) TTS (NR_145717) 128 NR_145717 109616961 NR_145717 ENSG00000221750 SNORA11G - small nucleolar RNA, H/ACA box 11G snoRNA chr2-12346 chr2 49925723 49925933 + 4.48 0.000 intron (NM_001330097, intron 5 of 5) intron (NM_001330097, intron 5 of 5) 48375 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr16-6789 chr16 78149575 78149785 + 4.48 0.000 intron (NM_001291997, intron 3 of 7) intron (NM_001291997, intron 3 of 7) 50026 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr6-8197 chr6 134139915 134140125 + 4.48 0.000 Intergenic Intergenic -22340 NR_037938 387065 Hs.571061 NR_037938 HMGA1P7 HMGA1L7 high mobility group AT-hook 1 pseudogene 7 pseudo chr17-6480 chr17 20636168 20636378 + 4.48 0.000 Intergenic Intergenic -3022 NR_146887 105371582 Hs.579165 NR_146887 ENSG00000227685 LINC02088 - long intergenic non-protein coding RNA 2088 ncRNA chr17-7598 chr17 21505198 21505408 + 4.48 0.000 Intergenic Intergenic 46375 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr6-6129 chr6 159951637 159951847 + 4.48 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -17357 NM_000876 3482 Hs.487062 NM_000876 ENSG00000197081 IGF2R CD222|CI-M6PR|CIMPR|M6P-R|M6P/IGF2R|MPR 300|MPR1|MPR300|MPRI insulin like growth factor 2 receptor protein-coding chr13-3713 chr13 39068904 39069114 + 4.48 0.000 Intergenic Intergenic 30553 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr8-6217 chr8 37569211 37569421 + 4.48 0.000 Intergenic L2c|LINE|L2 -47930 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr8-5671 chr8 119155686 119155896 + 4.48 0.000 Intergenic Intergenic -52572 NM_052886 114569 Hs.201083 NM_052886 ENSG00000147676 MAL2 - mal, T cell differentiation protein 2 (gene/pseudogene) protein-coding chr12-6273 chr12 46176378 46176588 + 4.48 0.000 Intergenic AluJr|SINE|Alu 90033 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr7-9551 chr7 141104779 141104989 + 4.48 0.000 intron (NM_001195278, intron 1 of 3) MLT1B|LTR|ERVL-MaLR 30820 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr16-5082 chr16 83320166 83320376 + 4.48 0.000 intron (NM_001220489, intron 4 of 12) AluJb|SINE|Alu -188075 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr11-7886 chr11 124760842 124761052 + 4.48 0.000 intron (NR_120577, intron 1 of 1) intron (NR_120577, intron 1 of 1) 1343 NM_138961 90952 Hs.173840 NM_138961 ENSG00000149564 ESAM W117m endothelial cell adhesion molecule protein-coding chr17-8567 chr17 80047943 80048153 + 4.48 0.000 intron (NM_001330508, intron 4 of 10) AluSx1|SINE|Alu 11406 NM_017950 55036 Hs.202542 NM_017950 ENSG00000141519 CCDC40 CILD15|FAP172 coiled-coil domain containing 40 protein-coding chr10-7585 chr10 18864672 18864882 + 4.48 0.000 Intergenic Intergenic -184024 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr6-4665 chr6 52589089 52589299 + 4.48 0.000 Intergenic Intergenic 11896 NR_103447 401264 Hs.544586 NR_103446 ENSG00000225791 TRAM2-AS1 - TRAM2 antisense RNA 1 (head to head) ncRNA chr5-8088 chr5 95881783 95881993 + 4.48 0.000 Intergenic MIR|SINE|MIR 29656 NR_026936 202299 Hs.8373 NM_175616 ENSG00000236882 LINC01554 C5orf27|FIS long intergenic non-protein coding RNA 1554 ncRNA chr9-7209 chr9 137698829 137699039 + 4.48 0.000 intron (NM_001354612, intron 1 of 8) intron (NM_001354612, intron 1 of 8) 79929 NM_001354611 79813 Hs.495511 NM_024757 ENSG00000181090 EHMT1 EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D euchromatic histone lysine methyltransferase 1 protein-coding chr2-4386 chr2 44768531 44768741 + 4.48 0.000 intron (NM_024766, intron 10 of 10) CpG 170252 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr8-2849 chr8 133185000 133185210 + 4.48 0.000 Intergenic Intergenic -5934 NR_037944 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr10-7113 chr10 97700062 97700272 + 4.48 0.000 Intergenic LTR5A|LTR|ERVK -12926 NM_021732 60370 Hs.23918 NM_021732 ENSG00000119986 AVPI1 PP5395|VIP32|VIT32 arginine vasopressin induced 1 protein-coding chr2-10721 chr2 29310303 29310513 + 4.48 0.000 intron (NM_004304, intron 8 of 28) intron (NM_004304, intron 8 of 28) -86508 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr4-8436 chr4 153848794 153849004 + 4.48 0.000 Intergenic L2c|LINE|L2 -59816 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr20-3681 chr20 13292373 13292583 + 4.48 0.000 intron (NM_080826, intron 5 of 5) intron (NM_080826, intron 5 of 5) -52791 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr13-2233 chr13 25025498 25025708 + 4.48 0.000 Intergenic Intergenic -57134 NR_026730 646405 Hs.620592 NM_001126062 TPTE2P1 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 pseudo chr7-6967 chr7 101092535 101092745 + 4.48 0.000 3' UTR (NM_030961, exon 3 of 3) 3' UTR (NM_030961, exon 3 of 3) 7159 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding chr19-6734 chr19 38329615 38329825 + 4.48 0.000 3' UTR (NM_004823, exon 3 of 3) 3' UTR (NM_004823, exon 3 of 3) -6110 NM_001330496 57828 Hs.324335 NM_021185 ENSG00000099338 CATSPERG C19orf15 cation channel sperm associated auxiliary subunit gamma protein-coding chr1-15465 chr1 154651214 154651424 + 4.48 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -23322 NM_001365046 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr10-5615 chr10 94350738 94350948 + 4.48 0.000 intron (NM_022451, intron 8 of 20) MER33|DNA|hAT-Charlie 12096 NM_022451 64318 Hs.74899 NM_022451 ENSG00000173145 NOC3L AD24|C10orf117|FAD24 NOC3 like DNA replication regulator protein-coding chrX-4144 chrX 29835103 29835313 + 4.48 0.000 intron (NM_014271, intron 6 of 10) intron (NM_014271, intron 6 of 10) 260930 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr2-10171 chr2 87452960 87453170 + 4.48 0.000 Intergenic MIR|SINE|MIR -2362 NR_146461 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr3-9823 chr3 75003547 75003757 + 4.48 0.000 Intergenic L1PA7|LINE|L1 -210824 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr15-3758 chr15 63257136 63257346 + 4.48 0.000 intron (NM_016530, intron 5 of 7) intron (NM_016530, intron 5 of 7) -20309 NM_001145646 83464 Hs.511703 NM_031301 ENSG00000138613 APH1B APH-1B|PRO1328|PSFL|TAAV688 aph-1 homolog B, gamma-secretase subunit protein-coding chr15-4033 chr15 62081475 62081685 + 4.48 0.000 Intergenic AluSq2|SINE|Alu 14603 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding chr20-3874 chr20 29759857 29760067 + 4.48 0.000 Intergenic LTR5A|LTR|ERVK -120422 NR_039689 100616194 NR_039689 ENSG00000266017 MIR4477B - microRNA 4477b ncRNA chr7-7234 chr7 24554087 24554297 + 4.48 0.000 Intergenic AluSg|SINE|Alu -19260 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chrX-4585 chrX 71975850 71976060 + 4.48 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) 64867 NM_001013627 340527 Hs.397836 NM_001013627 ENSG00000204131 NHSL2 - NHS like 2 protein-coding chr11-5277 chr11 35420026 35420236 + 4.48 0.000 promoter-TSS (NM_004171) promoter-TSS (NM_004171) -73 NM_001252652 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr8-6459 chr8 61603951 61604161 + 4.48 0.000 intron (NM_004318, intron 14 of 24) L2c|LINE|L2 85755 NM_001164751 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr3-4772 chr3 109730293 109730503 + 4.48 0.000 Intergenic Intergenic 127570 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr21-1240 chr21 45832316 45832526 + 4.48 0.000 intron (NR_038876, intron 2 of 2) MER41B|LTR|ERV1 3998 NR_038876 100129027 Hs.689591 NR_038876 ENSG00000205424 LOC100129027 - uncharacterized LOC100129027 ncRNA chr20-4355 chr20 55801596 55801806 + 4.48 0.000 Intergenic Intergenic 203818 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr1-13506 chr1 4894776 4894986 + 4.48 0.000 Intergenic Intergenic 240272 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr2-12475 chr2 61233526 61233736 + 4.48 0.000 intron (NM_014709, intron 57 of 79) AluJr|SINE|Alu 56213 NR_152216 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr17-5162 chr17 9530161 9530371 + 4.48 0.000 intron (NR_033656, intron 2 of 5) AluY|SINE|Alu 45554 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr10-3822 chr10 133080208 133080418 + 4.48 0.000 Intergenic Intergenic 6384 NR_111905 100128127 Hs.694139 NR_111905 ADGRA1-AS1 GPR123-AS1 adhesion G protein-coupled receptor A1 antisense RNA 1 ncRNA chr16-6034 chr16 9922066 9922276 + 4.48 0.000 intron (NM_001134408, intron 3 of 13) intron (NM_001134408, intron 3 of 13) 259896 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr3-9373 chr3 47106774 47106984 + 4.48 0.000 intron (NR_146158, intron 5 of 21) intron (NR_146158, intron 5 of 21) 57098 NM_014159 29072 Hs.517941 NM_012271 ENSG00000181555 SETD2 HBP231|HIF-1|HIP-1|HSPC069|HYPB|KMT3A|LLS|SET2|p231HBP SET domain containing 2, histone lysine methyltransferase protein-coding chr11-8760 chr11 9159235 9159445 + 4.48 0.000 intron (NR_145966, intron 12 of 21) AluSq2|SINE|Alu 64977 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr9-7952 chr9 91208234 91208444 + 4.48 0.000 Intergenic Intergenic 89277 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr2-12164 chr2 39161344 39161554 + 4.48 0.000 Intergenic Intergenic -40986 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr11-10212 chr11 97651549 97651759 + 4.48 0.000 Intergenic L1PA12|LINE|L1 1143229 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr6-6564 chr6 136388175 136388385 + 4.48 0.000 intron (NM_001198617, intron 3 of 15) intron (NM_001198617, intron 3 of 15) 78595 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr9-6522 chr9 109279057 109279267 + 4.48 0.000 intron (NM_019114, intron 2 of 25) intron (NM_019114, intron 2 of 25) 41802 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr2-7749 chr2 38370340 38370550 + 4.48 0.000 intron (NM_001330462, intron 1 of 13) AluSx1|SINE|Alu 6085 NM_001330459 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr3-10418 chr3 130711265 130711475 + 4.48 0.000 intron (NM_014602, intron 9 of 19) L1MEc|LINE|L1 35459 NM_014602 30849 Hs.149032 NM_014602 ENSG00000196455 PIK3R4 VPS15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding chr5-6974 chr5 146496704 146496914 + 4.48 0.000 intron (NM_006706, intron 15 of 21) AluJo|SINE|Alu 19304 NM_194251 134391 Hs.483732 NM_194251 ENSG00000173250 GPR151 GALR4|GALRL|GPCR|GPCR-2037|PGR7 G protein-coupled receptor 151 protein-coding chr8-5548 chr8 72882244 72882454 + 4.48 0.000 intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) -126515 NM_017489 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding chr8-5694 chr8 125422514 125422724 + 4.48 0.000 Intergenic MER115|DNA|hAT-Tip100 -7739 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr10-6588 chr10 81385168 81385378 + 4.48 0.000 Intergenic L1M1|LINE|L1 -489921 NM_001370083 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr14-4902 chr14 72943426 72943636 + 4.48 0.000 intron (NM_001352447, intron 6 of 13) intron (NM_001352447, intron 6 of 13) 17067 NM_015604 26094 Hs.331491 NM_015604 ENSG00000119599 DCAF4 WDR21|WDR21A DDB1 and CUL4 associated factor 4 protein-coding chr8-4855 chr8 40490717 40490927 + 4.48 0.000 Intergenic AluJr|SINE|Alu -147459 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr1-13076 chr1 179895594 179895804 + 4.48 0.000 intron (NM_001267578, intron 3 of 9) AluSx|SINE|Alu 13657 NM_015602 26092 Hs.496459 NM_015602 ENSG00000143337 TOR1AIP1 LAP1|LAP1B|LGMD2Y torsin 1A interacting protein 1 protein-coding chr20-2846 chr20 62266418 62266628 + 4.48 0.000 intron (NM_001363878, intron 5 of 14) intron (NM_001363878, intron 5 of 14) 28002 NM_001278649 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding chr13-4325 chr13 101490732 101490942 + 4.48 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 885 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chrX-5034 chrX 121386565 121386775 + 4.48 0.000 Intergenic THE1C|LTR|ERVL-MaLR 15698 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr3-7540 chr3 184766061 184766271 + 4.48 0.000 intron (NR_110043, intron 1 of 2) intron (NR_110043, intron 1 of 2) 6989 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LINC02069 - long intergenic non-protein coding RNA 2069 ncRNA chr1-13087 chr1 182166807 182167017 + 4.48 0.000 Intergenic Intergenic -105200 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr7-5814 chr7 82848102 82848312 + 4.48 0.000 intron (NM_033026, intron 10 of 24) intron (NM_033026, intron 10 of 24) 314677 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr20-4159 chr20 44332559 44332769 + 4.48 0.000 Intergenic AluJr|SINE|Alu -4494 NM_178491 140902 Hs.580807 NM_178491 ENSG00000101074 R3HDML dJ881L22.3 R3H domain containing like protein-coding chr17-6656 chr17 72462785 72462995 + 4.48 0.000 intron (NR_036488, intron 1 of 3) MER1A|DNA|hAT-Charlie 120079 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr7-8428 chr7 46989996 46990206 + 4.48 0.000 Intergenic L1MB1|LINE|L1 -292979 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr11-8992 chr11 22922448 22922658 + 4.48 0.000 Intergenic L1MD2|LINE|L1 -62079 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding chr19-6235 chr19 6415617 6415827 + 4.48 0.000 TTS (NR_037505) TTS (NR_037505) 789 NR_037505 100500888 NR_037505 ENSG00000284159 MIR3940 mir-3940 microRNA 3940 ncRNA chr10-7218 chr10 117539528 117539738 + 4.48 0.000 intron (NR_002791, intron 2 of 3) intron (NR_002791, intron 2 of 3) -2812 NM_001165924 2018 Hs.202095 NM_004098 ENSG00000170370 EMX2 - empty spiracles homeobox 2 protein-coding chr14-3598 chr14 41830752 41830962 + 4.48 0.000 intron (NM_001330106, intron 2 of 4) LTR33C|LTR|ERVL 224001 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chrX-5386 chrX 151174241 151174451 + 4.48 0.000 TTS (NR_135300) TTS (NR_135300) -2238 NM_004224 9248 Hs.567390 NM_004224 ENSG00000102195 GPR50 H9|Mel1c G protein-coupled receptor 50 protein-coding chr5-4977 chr5 79877499 79877709 + 4.48 0.000 Intergenic L2b|LINE|L2 -58975 NR_131226 105616916 Hs.590325 NR_131226 ENSG00000250888 LINC01455 MDONA|TCONS_00009433 long intergenic non-protein coding RNA 1455 ncRNA chr12-7845 chr12 103514511 103514721 + 4.48 0.000 Intergenic L2a|LINE|L2 18576 NR_135004 105369945 Hs.742785 NR_135004 LOC105369945 - uncharacterized LOC105369945 ncRNA GL000224.1-6 GL000224.1 9703 9913 + 4.48 0.000 NA NA NA NA chr10-7896 chr10 50016332 50016542 + 4.48 0.000 Intergenic Intergenic 28119 NM_001365867 414189 Hs.536158 NM_001077665 ENSG00000204149 AGAP6 AGAP-6|CTGLF3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 6 protein-coding chr6-7029 chr6 24262361 24262571 + 4.48 0.000 intron (NM_016356, intron 7 of 9) L1M1|LINE|L1 -94437 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr3-6683 chr3 131260641 131260851 + 4.48 0.000 intron (NM_001353036, intron 14 of 14) intron (NM_001353036, intron 14 of 14) -101099 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr6-8585 chr6 165897891 165898101 + 4.48 0.000 Intergenic Intergenic -89555 NR_027284 441177 Hs.708964 NM_001013720 ENSG00000281832 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA chr12-7164 chr12 48910342 48910552 + 4.48 0.000 intron (NM_001286957, intron 2 of 7) intron (NM_001286957, intron 2 of 7) 6314 NM_001286957 85478 Hs.512805 NM_033124 ENSG00000139537 CCDC65 CFAP250|DRC2|FAP250|NYD-SP28 coiled-coil domain containing 65 protein-coding chr11-7865 chr11 119675253 119675463 + 4.48 0.000 intron (NM_203285, intron 4 of 7) intron (NM_203285, intron 4 of 7) 53842 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr5-7783 chr5 63458480 63458690 + 4.48 0.000 Intergenic L1PREC2|LINE|L1 503707 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr11-10352 chr11 110962754 110962964 + 4.48 0.000 Intergenic Intergenic 134459 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr12-7644 chr12 82314682 82314892 + 4.48 0.000 Intergenic L1PA6|LINE|L1 43600 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chrX-4535 chrX 68098519 68098729 + 4.48 0.000 intron (NM_002547, intron 18 of 24) intron (NM_002547, intron 18 of 24) 334871 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr13-4441 chr13 111880349 111880559 + 4.48 0.000 Intergenic Intergenic -12924 NR_046992 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr20-3886 chr20 31347883 31348093 + 4.48 0.000 Intergenic L1M1|LINE|L1 -20613 NM_054112 117285 Hs.274124 NM_054112 ENSG00000131068 DEFB118 C20orf63|DEFB-18|ESC42|ESP13.6 defensin beta 118 protein-coding chr15-3917 chr15 33559382 33559592 + 4.48 0.000 intron (NM_001243996, intron 10 of 102) MER74B|LTR|ERVL 248520 NM_001036 6263 Hs.709373 NM_001036 ENSG00000198838 RYR3 RYR-3 ryanodine receptor 3 protein-coding chr8-6667 chr8 80249800 80250010 + 4.48 0.000 Intergenic Intergenic 8516 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA chr11-4961 chr11 67990949 67991159 + 4.48 0.000 TTS (NM_030930) TTS (NM_030930) 13043 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr9-5544 chr9 109321022 109321232 + 4.48 0.000 promoter-TSS (NM_018424) promoter-TSS (NM_018424) -163 NM_019114 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr1-15801 chr1 177109769 177109979 + 4.48 0.000 intron (NM_207108, intron 1 of 21) intron (NM_207108, intron 1 of 21) 54838 NM_004319 460 Hs.495897 NM_004319 ENSG00000152092 ASTN1 ASTN astrotactin 1 protein-coding chr8-6493 chr8 64039034 64039244 + 4.48 0.000 intron (NR_125826, intron 4 of 4) AluSx|SINE|Alu 269709 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA chr16-5074 chr16 77215653 77215863 + 4.48 0.000 Intergenic AluSq2|SINE|Alu 16350 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding chr11-10157 chr11 92893689 92893899 + 4.48 0.000 3' UTR (NM_001367949, exon 28 of 28) 3' UTR (NM_001367949, exon 28 of 28) 21834 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr16-5980 chr16 5004484 5004694 + 4.48 0.000 intron (NM_014692, intron 11 of 15) intron (NM_014692, intron 11 of 15) -29113 NR_038913 100507589 Hs.729936 NR_038913 NAGPA-AS1 - NAGPA antisense RNA 1 ncRNA chr8-5237 chr8 126003150 126003360 + 4.48 0.000 Intergenic L1ME3|LINE|L1 -52058 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr1-10327 chr1 152284543 152284753 + 4.48 0.000 Intergenic L1PA15|LINE|L1 -28811 NR_103778 339400 Hs.23783 NR_103778 ENSG00000237975 FLG-AS1 - FLG antisense RNA 1 ncRNA chr1-12533 chr1 25846277 25846487 + 4.48 0.000 intron (NM_024037, intron 1 of 2) AluSz|SINE|Alu 13075 NM_024037 79000 Hs.149305 NM_024037 ENSG00000127423 AUNIP AIBP|C1orf135 aurora kinase A and ninein interacting protein protein-coding chr2-11773 chr2 13183165 13183375 + 4.48 0.000 Intergenic Intergenic -176257 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr1-13558 chr1 7455792 7456002 + 4.48 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) -66143 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr17-6301 chr17 49921700 49921910 + 4.48 0.000 Intergenic L2a|LINE|L2 -47385 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr3-11099 chr3 185702122 185702332 + 4.48 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) -11025 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr16-6981 chr16 86967514 86967724 + 4.48 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -90165 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr4-6359 chr4 103546520 103546730 + 4.48 0.000 Intergenic LTR18A|LTR|ERVL 121583 NR_125925 101929448 Hs.570839 NR_125925 ENSG00000248740 LINC02428 - long intergenic non-protein coding RNA 2428 ncRNA chr22-4134 chr22 44574642 44574852 + 4.48 0.000 Intergenic Intergenic 5407 NR_028409 388910 Hs.332685 NM_001012986 ENSG00000187012 LINC00207 NCRNA00207 long intergenic non-protein coding RNA 207 ncRNA chr5-7861 chr5 72698747 72698957 + 4.48 0.000 Intergenic Intergenic -38183 NR_105007 102477328 Hs.254516 NR_105007 ENSG00000248371 LINC02056 - long intergenic non-protein coding RNA 2056 ncRNA chr10-8096 chr10 68806004 68806214 + 4.48 0.000 Intergenic AluSz|SINE|Alu -21422 NM_001130161 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr2-13250 chr2 126802287 126802497 + 4.48 0.000 Intergenic Intergenic -96498 NM_001322244 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr11-2628 chr11 12640921 12641131 + 4.48 0.000 Intergenic Intergenic -33395 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr6-5503 chr6 164122103 164122313 + 4.48 0.000 Intergenic Intergenic -450724 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr16-6603 chr16 67372707 67372917 + 4.48 0.000 intron (NM_018296, intron 9 of 13) intron (NM_018296, intron 9 of 13) 20686 NM_015964 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr5-9108 chr5 173227826 173228036 + 4.48 0.000 Intergenic Intergenic 7275 NM_001166175 1482 Hs.54473 NM_004387 ENSG00000183072 NKX2-5 CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3 NK2 homeobox 5 protein-coding chr11-10575 chr11 122703862 122704072 + 4.48 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 48245 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr2-9899 chr2 223465908 223466118 + 4.48 0.000 Intergenic LTR78B|LTR|ERV1 136348 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr12-4402 chr12 6423883 6424093 + 4.48 0.000 Intergenic Intergenic -20897 NM_001242 939 Hs.355307 NM_001242 ENSG00000139193 CD27 S152|S152. LPFS2|T14|TNFRSF7|Tp55 CD27 molecule protein-coding chr9-5153 chr9 38324906 38325116 + 4.48 0.000 Intergenic SVA_F|Retroposon|SVA -67691 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr4-6239 chr4 65137512 65137722 + 4.48 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -133117 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr17-4727 chr17 34154313 34154523 + 4.48 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 2388 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr12-6883 chr12 21550394 21550604 + 4.48 0.000 intron (NM_021957, intron 11 of 15) intron (NM_021957, intron 11 of 15) 22574 NR_135188 80763 Hs.130692 NM_030572 ENSG00000134548 SPX C12orf39 spexin hormone protein-coding chr3-10352 chr3 127942269 127942479 + 4.48 0.000 intron (NM_001370224, intron 4 of 6) L1MA9|LINE|L1 27142 NM_207335 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr2-10441 chr2 205724534 205724744 + 4.48 0.000 intron (NM_018534, intron 5 of 15) intron (NM_018534, intron 5 of 15) 42138 NM_201279 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr3-11148 chr3 188728016 188728226 + 4.48 0.000 intron (NM_001167672, intron 6 of 9) intron (NM_001167672, intron 6 of 9) 39340 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr5-5828 chr5 177672027 177672237 + 4.48 0.000 non-coding (NR_026921, exon 1 of 6) non-coding (NR_026921, exon 1 of 6) 145 NR_026921 202181 Hs.189914 NR_026921 LOC202181 - SUMO interacting motifs containing 1 pseudogene pseudo chr4-6631 chr4 1669236 1669446 + 4.48 0.000 intron (NM_001174070, intron 1 of 4) intron (NM_001174070, intron 1 of 4) 14650 NM_001013622 152877 Hs.143314 NM_001013622 ENSG00000174137 FAM53A DNTNP family with sequence similarity 53 member A protein-coding chr6-5643 chr6 74542861 74543071 + 4.48 0.000 intron (NR_110856, intron 2 of 3) MLT2A1|LTR|ERVL 473515 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr7-5958 chr7 100720738 100720948 + 4.48 0.000 5' UTR (NM_000799, exon 1 of 5) 5' UTR (NM_000799, exon 1 of 5) 375 NM_000799 2056 Hs.2303 NM_000799 ENSG00000130427 EPO DBAL|ECYT5|EP|MVCD2 erythropoietin protein-coding chr11-7770 chr11 83758222 83758432 + 4.48 0.000 intron (NM_001142699, intron 18 of 27) intron (NM_001142699, intron 18 of 27) -75902 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr9-6357 chr9 16888012 16888222 + 4.48 0.000 Intergenic AluY|SINE|Alu -17447 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr2-12530 chr2 65800617 65800827 + 4.48 0.000 Intergenic AluJr|SINE|Alu -368123 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr6-5938 chr6 71853209 71853419 + 4.48 0.000 Intergenic Intergenic -33389 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr3-10653 chr3 148948185 148948395 + 4.48 0.000 Intergenic Intergenic -43118 NM_001184721 2992 Hs.477892 NM_004130 ENSG00000163754 GYG1 GSD15|GYG glycogenin 1 protein-coding chr16-6731 chr16 74211412 74211622 + 4.48 0.000 intron (NR_104657, intron 1 of 3) AluSz|SINE|Alu 4004 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr20-3451 chr20 50625913 50626123 + 4.48 0.000 intron (NM_001290268, intron 2 of 21) intron (NM_001290268, intron 2 of 21) 10900 NM_080829 140876 Hs.372578 NM_080829 ENSG00000042062 RIPOR3 C20orf175|C20orf176|FAM65C RIPOR family member 3 protein-coding chr9-8234 chr9 110102512 110102722 + 4.48 0.000 intron (NM_001004065, intron 1 of 3) (CCTCC)n|Simple_repeat|Simple_repeat -22884 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr2-5364 chr2 96681385 96681595 + 4.48 0.000 intron (NM_001293083, intron 19 of 52) L1MEd|LINE|L1 38726 NM_001293083 90342 Hs.534025 NM_001077400 ENSG00000249715 FER1L5 - fer-1 like family member 5 protein-coding chrX-1573 chrX 68912283 68912493 + 4.48 0.000 Intergenic Intergenic 83391 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr11-9575 chr11 64969366 64969576 + 4.48 0.000 intron (NM_001037225, intron 1 of 10) L2|LINE|L2 2620 NM_001300803 283129 Hs.567793 NM_001037225 ENSG00000168070 MAJIN C11orf85 membrane anchored junction protein protein-coding chr18-2219 chr18 66547597 66547807 + 4.48 0.000 intron (NM_001271028, intron 5 of 9) AluYa5|SINE|Alu 56388 NM_001271028 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr2-12253 chr2 44704540 44704750 + 4.48 0.000 intron (NM_024766, intron 4 of 10) intron (NM_024766, intron 4 of 10) 234243 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr7-9557 chr7 141490945 141491155 + 4.48 0.000 Intergenic AluJb|SINE|Alu -60360 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr1-7508 chr1 152110596 152110806 + 4.48 0.000 exon (NM_007113, exon 3 of 3) exon (NM_007113, exon 3 of 3) 4753 NM_007113 7062 Hs.432416 NM_007113 ENSG00000159450 TCHH THH|THL|TRHY|UHS3 trichohyalin protein-coding chr3-10747 chr3 156120691 156120901 + 4.48 0.000 exon (NM_001308217, exon 1 of 13) exon (NM_001308217, exon 1 of 13) 248 NM_172160 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr16-5022 chr16 50132935 50133145 + 4.48 0.000 Intergenic AluSq2|SINE|Alu -19871 NM_001040285 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr5-9099 chr5 172788512 172788722 + 4.48 0.000 Intergenic AluSp|SINE|Alu -17422 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr4-7253 chr4 47021321 47021531 + 4.48 0.000 Intergenic Intergenic -10141 NM_000812 2560 Hs.27283 NM_000812 ENSG00000163288 GABRB1 EIEE45 gamma-aminobutyric acid type A receptor beta1 subunit protein-coding chr20-4138 chr20 43496668 43496878 + 4.48 0.000 Intergenic Intergenic -10924 NM_032107 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chr14-5243 chr14 99374766 99374976 + 4.48 0.000 Intergenic Intergenic -102674 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr2-12049 chr2 30356804 30357014 + 4.48 0.000 Intergenic MER21C|LTR|ERVL 10263 NR_122048 285043 Hs.429119 NR_122048 LINC01936 - long intergenic non-protein coding RNA 1936 ncRNA chr2-13262 chr2 127138489 127138699 + 4.48 0.000 Intergenic Intergenic -31440 NM_139345 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr22-3555 chr22 17494049 17494259 + 4.48 0.000 intron (NM_001290046, intron 2 of 18) AluSp|SINE|Alu -69285 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr6-7611 chr6 76798736 76798946 + 4.48 0.000 Intergenic L1PB1|LINE|L1 -205218 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr20-4223 chr20 47806155 47806365 + 4.48 0.000 Intergenic LTR1D1|LTR|ERV1 -19644 NM_001161841 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr13-3006 chr13 111130032 111130242 + 4.48 0.000 intron (NM_001113512, intron 1 of 17) L1ME1|LINE|L1 -14459 NR_046667 100874238 Hs.569218 NR_046667 ENSG00000235875 ARHGEF7-AS2 - ARHGEF7 antisense RNA 2 ncRNA chr1-15051 chr1 94813081 94813291 + 4.48 0.000 intron (NR_160783, intron 1 of 3) LTR22B1|LTR|ERVK 7046 NR_160784 101928079 Hs.596857 NR_104131 ENSG00000224081 SLC44A3-AS1 LINC01057|XLOC_000303 SLC44A3 antisense RNA 1 ncRNA chr2-10280 chr2 128204500 128204710 + 4.48 0.000 Intergenic AluSx1|SINE|Alu 113405 NR_027671 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr17-6450 chr17 14093128 14093338 + 4.48 0.000 intron (NM_001303, intron 3 of 6) intron (NM_001303, intron 3 of 6) 23729 NM_001303 1352 Hs.462278 NM_001303 ENSG00000006695 COX10 - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 protein-coding chr11-4153 chr11 46948531 46948741 + 4.48 0.000 intron (NM_001278222, intron 1 of 7) intron (NM_001278222, intron 1 of 7) 11875 NM_001003677 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr15-4895 chr15 76756535 76756745 + 4.48 0.000 intron (NR_148227, intron 14 of 32) MLT1F2|LTR|ERVL-MaLR 105304 NM_001145923 49855 Hs.458986 NM_020843 ENSG00000140386 SCAPER IDDRP|MSTP063|ZNF291|Zfp291 S-phase cyclin A associated protein in the ER protein-coding chr8-4724 chr8 141641346 141641556 + 4.48 0.000 Intergenic Intergenic -134221 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr3-5589 chr3 7969200 7969410 + 4.48 0.000 intron (NR_110131, intron 2 of 3) intron (NR_110131, intron 2 of 3) 47002 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr12-7413 chr12 58124214 58124424 + 4.48 0.000 Intergenic Intergenic 36427 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chrX-3961 chrX 12210417 12210627 + 4.48 0.000 intron (NM_001368396, intron 1 of 16) intron (NM_001368396, intron 1 of 16) 72049 NM_001368401 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chrX-3035 chrX 86173895 86174105 + 4.48 0.000 intron (NM_001139514, intron 1 of 11) L2a|LINE|L2 25549 NM_053281 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr4-7396 chr4 62806932 62807142 + 4.48 0.000 Intergenic L1PA15-16|LINE|L1 -645272 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr11-7895 chr11 127301723 127301933 + 4.48 0.000 intron (NR_120580, intron 1 of 2) MIR|SINE|MIR 30758 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr10-5185 chr10 59652182 59652392 + 4.48 0.000 3' UTR (NM_001323978, exon 7 of 7) 3' UTR (NM_001323978, exon 7 of 7) 57604 NM_001323979 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr20-3805 chr20 23244627 23244837 + 4.48 0.000 Intergenic Intergenic -106059 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding chr2-11746 chr2 11144516 11144726 + 4.48 0.000 3' UTR (NM_001371321, exon 3 of 3) 3' UTR (NM_001371321, exon 3 of 3) -10751 NM_001282710 130814 Hs.274415 NM_152391 ENSG00000162976 SLC66A3 C2orf22|PQLC3 solute carrier family 66 member 3 protein-coding chrY-31 chrY 10911598 10911808 + 4.48 0.000 Intergenic BSR/Beta|Satellite|Satellite 1000905 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 ncRNA chr13-4248 chr13 96856433 96856643 + 4.48 0.000 Intergenic Intergenic 127634 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr15-5237 chr15 97237695 97237905 + 4.48 0.000 Intergenic Intergenic 284011 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chr18-2377 chr18 71394990 71395200 + 4.48 0.000 Intergenic L1MDb|LINE|L1 183861 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr17-7013 chr17 54487802 54488012 + 4.48 0.000 Intergenic Tigger15a|DNA|TcMar-Tigger -412784 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding chr10-8853 chr10 111208317 111208527 + 4.48 0.000 Intergenic Intergenic 94131 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr7-8067 chr7 23636746 23636956 + 4.48 0.000 intron (NM_138771, intron 3 of 3) SVA_E|Retroposon|SVA 39469 NM_138771 90693 Hs.232296 NM_138771 ENSG00000169193 CCDC126 - coiled-coil domain containing 126 protein-coding chr2-11246 chr2 170713848 170714058 + 4.48 0.000 non-coding (NR_027433, exon 1 of 1) non-coding (NR_027433, exon 1 of 1) 614 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr10-6279 chr10 90106311 90106521 + 4.48 0.000 Intergenic L1M1|LINE|L1 -149043 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr5-6769 chr5 85175665 85175875 + 4.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR -790890 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr9-7790 chr9 79588219 79588429 + 4.48 0.000 intron (NM_001351556, intron 4 of 18) AluSc|SINE|Alu 15147 NM_001351560 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr9-7290 chr9 8765977 8766187 + 4.48 0.000 intron (NM_002839, intron 11 of 45) intron (NM_002839, intron 11 of 45) -32136 NM_001171025 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr1-15735 chr1 171320587 171320797 + 4.48 0.000 intron (NM_002022, intron 3 of 9) intron (NM_002022, intron 3 of 9) 6509 NM_002022 2329 Hs.386502 NM_002022 ENSG00000076258 FMO4 FMO2 flavin containing dimethylaniline monoxygenase 4 protein-coding chr20-3713 chr20 16344485 16344695 + 4.48 0.000 intron (NM_024704, intron 23 of 25) intron (NM_024704, intron 23 of 25) 228858 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr6-3795 chr6 25465066 25465276 + 4.48 0.000 intron (NM_001173977, intron 8 of 36) intron (NM_001173977, intron 8 of 36) 185797 NM_001173977 55604 Hs.649550 NM_017640 ENSG00000079691 CARMIL1 CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5 capping protein regulator and myosin 1 linker 1 protein-coding chr1-11036 chr1 223078752 223078962 + 4.48 0.000 Intergenic Intergenic 64391 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr2-14006 chr2 191051617 191051827 + 4.48 0.000 intron (NM_003151, intron 14 of 23) intron (NM_003151, intron 14 of 23) 30196 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr16-6114 chr16 14339372 14339582 + 4.48 0.000 Intergenic AluSx1|SINE|Alu 30192 NR_029854 100126355 NR_029854 ENSG00000199130 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a|mir-365a microRNA 365a ncRNA chrX-2361 chrX 66312178 66312388 + 4.48 0.000 Intergenic Intergenic 144533 NM_001367234 9843 Hs.31720 NM_014799 ENSG00000089472 HEPH CPL hephaestin protein-coding chr3-10980 chr3 178350878 178351088 + 4.48 0.000 Intergenic Intergenic -68218 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr11-8337 chr11 77164872 77165082 + 4.48 0.000 intron (NM_001127180, intron 14 of 48) MIRb|SINE|MIR 36731 NM_000260 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr16-5439 chr16 1230810 1231020 + 4.48 0.000 promoter-TSS (NM_024164) promoter-TSS (NM_024164) -731 NM_024164 64499 Hs.405479 NM_024164 ENSG00000197253 TPSB2 TPS2|tryptaseB|tryptaseC tryptase beta 2 (gene/pseudogene) protein-coding chr12-8320 chr12 129595165 129595375 + 4.48 0.000 intron (NM_133448, intron 2 of 8) intron (NM_133448, intron 2 of 8) 308755 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr12-3634 chr12 93571053 93571263 + 4.48 0.000 promoter-TSS (NM_001270470) promoter-TSS (NM_001270470) 146 NM_001270468 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr6-8277 chr6 141563193 141563403 + 4.48 0.000 Intergenic Intergenic 525501 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr2-10217 chr2 105403812 105404022 + 4.48 0.000 intron (NM_201557, intron 1 of 5) intron (NM_201557, intron 1 of 5) -4250 NM_001318894 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr7-7483 chr7 98468241 98468451 + 4.48 0.000 Intergenic THE1D|LTR|ERVL-MaLR -67256 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr7-8656 chr7 71460641 71460851 + 4.48 0.000 intron (NM_022479, intron 5 of 10) MER41A|LTR|ERV1 -152976 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr2-9998 chr2 20341989 20342199 + 4.48 0.000 intron (NM_001352920, intron 1 of 19) AluSx1|SINE|Alu 8750 NM_001352917 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr3-9671 chr3 62874189 62874399 + 4.48 0.000 intron (NM_003716, intron 1 of 29) CpG 1122 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr11-5579 chr11 106900064 106900274 + 4.48 0.000 intron (NM_001256424, intron 4 of 8) intron (NM_001256424, intron 4 of 8) 118307 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr5-8082 chr5 95634199 95634409 + 4.48 0.000 Intergenic AluJb|SINE|Alu -12473 NM_001131066 317671 Hs.399758 NM_173362 ENSG00000175449 RFESD - Rieske Fe-S domain containing protein-coding chr20-4262 chr20 49401135 49401345 + 4.48 0.000 intron (NM_004975, intron 1 of 1) intron (NM_004975, intron 1 of 1) 81428 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr13-3827 chr13 47805271 47805481 + 4.48 0.000 Intergenic Intergenic 127246 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr12-6058 chr12 112928561 112928771 + 4.48 0.000 intron (NM_001320151, intron 5 of 5) MLT1H|LTR|ERVL-MaLR -9808 NM_006187 4940 Hs.528634 NM_006187 ENSG00000111331 OAS3 p100|p100OAS 2'-5'-oligoadenylate synthetase 3 protein-coding chr11-8789 chr11 10599826 10600036 + 4.48 0.000 TTS (NR_034093) TTS (NR_034093) -31266 NM_006691 10894 Hs.655332 NM_006691 ENSG00000133800 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding chr16-6971 chr16 86258903 86259113 + 4.48 0.000 intron (NR_104139, intron 3 of 5) intron (NR_104139, intron 3 of 5) 27239 NR_104139 101154687 Hs.640512 NR_104139 LINC01081 TCONS00024764|TCONS_00024764 long intergenic non-protein coding RNA 1081 ncRNA chr4-7103 chr4 33901582 33901792 + 4.48 0.000 intron (NR_125902, intron 4 of 4) MIR|SINE|MIR 138206 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr7-6062 chr7 113770031 113770241 + 4.48 0.000 Intergenic LTR1A2|LTR|ERV1 148873 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr4-8039 chr4 119980947 119981157 + 4.48 0.000 Intergenic Intergenic 41512 NR_121639 100996694 Hs.119926 NR_121639 ENSG00000250392 LINC02502 - long intergenic non-protein coding RNA 2502 ncRNA chr18-3247 chr18 49214936 49215146 + 4.48 0.000 intron (NM_001353214, intron 13 of 17) L3|LINE|CR1 -165273 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr2-8214 chr2 95764543 95764753 + 4.48 0.000 Intergenic Intergenic 62333 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr11-10311 chr11 108368137 108368347 + 4.48 0.000 3' UTR (NM_000051, exon 63 of 63) 3' UTR (NM_000051, exon 63 of 63) 99287 NM_001351110 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr4-7373 chr4 60418955 60419165 + 4.48 0.000 Intergenic L1PA7|LINE|L1 -503559 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr2-14169 chr2 205188348 205188558 + 4.48 0.000 intron (NM_205863, intron 14 of 21) intron (NM_205863, intron 14 of 21) -494047 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr5-2729 chr5 126522777 126522987 + 4.48 0.000 Intergenic Intergenic 57732 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr11-4799 chr11 3434973 3435183 + 4.48 0.000 Intergenic LTR12C|LTR|ERV1 -43163 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr1-14622 chr1 55747940 55748150 + 4.48 0.000 Intergenic LTR78|LTR|ERV1 196918 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA chr1-8917 chr1 6936052 6936262 + 4.48 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 150703 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr6-8541 chr6 161198312 161198522 + 4.48 0.000 intron (NM_020133, intron 2 of 8) MER20|DNA|hAT-Charlie -36435 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr17-7366 chr17 7130044 7130254 + 4.48 0.000 Intergenic MIRb|SINE|MIR -15338 NM_001201352 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chr11-8430 chr11 108540741 108540951 + 4.48 0.000 intron (NM_015065, intron 2 of 5) (CTC)n|Simple_repeat|Simple_repeat -2669 NM_001144765 23086 Hs.28540 NM_015065 ENSG00000110723 EXPH5 SLAC2-B|SLAC2B exophilin 5 protein-coding chr7-4814 chr7 97359725 97359935 + 4.48 0.000 Intergenic AluSx|SINE|Alu 243237 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr17-5366 chr17 30982177 30982387 + 4.48 0.000 intron (NM_197939, intron 1 of 3) L1MB4|LINE|L1 6947 NR_002221 503645 Hs.683578 NR_002221 ENSG00000264743 DPRXP4 - divergent-paired related homeobox pseudogene 4 pseudo chr4-5934 chr4 152029599 152029809 + 4.48 0.000 Intergenic Intergenic -71049 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr11-5648 chr11 123410056 123410266 + 4.48 0.000 intron (NM_001367419, intron 1 of 20) intron (NM_001367419, intron 1 of 20) -20108 NM_001354837 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr7-8104 chr7 25981227 25981437 + 4.48 0.000 Intergenic Intergenic -31346 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr14-4593 chr14 50977252 50977462 + 4.48 0.000 intron (NM_015163, intron 9 of 9) intron (NM_015163, intron 9 of 9) -32874 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr11-6491 chr11 68293546 68293756 + 4.48 0.000 Intergenic L1MC4a|LINE|L1 -18940 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr12-6290 chr12 50031323 50031533 + 4.48 0.000 Intergenic AluSz|SINE|Alu -5871 NM_001320001 29127 Hs.505469 NM_013277 ENSG00000161800 RACGAP1 CYK4|HsCYK-4|ID-GAP|MgcRacGAP Rac GTPase activating protein 1 protein-coding chr3-10309 chr3 126499393 126499603 + 4.48 0.000 intron (NM_001165974, intron 13 of 20) intron (NM_001165974, intron 13 of 20) 18275 NM_144639 131669 Hs.331148 NM_144639 ENSG00000159650 UROC1 HMFN0320|UROCD urocanate hydratase 1 protein-coding chr11-5068 chr11 111510531 111510741 + 4.48 0.000 promoter-TSS (NR_147706) promoter-TSS (NR_147706) 34 NR_147706 728196 Hs.363156 NR_147706 ENSG00000286028 LOC728196 - uncharacterized LOC728196 ncRNA chr9-8381 chr9 118343705 118343915 + 4.48 0.000 Intergenic AluSx3|SINE|Alu -335861 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr8-7298 chr8 132055633 132055843 + 4.48 0.000 intron (NM_001080399, intron 1 of 13) intron (NM_001080399, intron 1 of 13) 3644 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr5-9053 chr5 170348195 170348405 + 4.48 0.000 Intergenic L2a|LINE|L2 -5187 NM_001034838 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr2-12806 chr2 88619756 88619966 + 4.48 0.000 intron (NM_004836, intron 1 of 16) AluSx|SINE|Alu 5068 NM_001313915 9451 Hs.591589 NM_004836 ENSG00000172071 EIF2AK3 PEK|PERK|WRS eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding chr2-7402 chr2 8569687 8569897 + 4.48 0.000 intron (NR_110257, intron 5 of 5) intron (NR_110257, intron 5 of 5) 14000 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr1-13049 chr1 171516955 171517165 + 4.48 0.000 intron (NM_015172, intron 5 of 33) MLT1F|LTR|ERVL-MaLR 31530 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding chr15-3118 chr15 65249554 65249764 + 4.48 0.000 Intergenic Intergenic 35932 NR_145768 109617003 NR_145768 ENSG00000206903 SNORA24B - small nucleolar RNA, H/ACA box 24B snoRNA chr19-6214 chr19 5985208 5985418 + 4.48 0.000 intron (NR_046376, intron 1 of 3) LTR45C|LTR|ERV1 6910 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA chr1-16441 chr1 226860641 226860851 + 4.48 0.000 Intergenic Charlie1a|DNA|hAT-Charlie -9826 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr3-10700 chr3 152332466 152332676 + 4.48 0.000 intron (NM_207296, intron 1 of 7) intron (NM_207296, intron 1 of 7) 8419 NR_132656 645843 Hs.632562 NM_001123228 ENSG00000221962 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr4-6395 chr4 116926051 116926261 + 4.48 0.000 Intergenic CpG 159420 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr6-6912 chr6 13888206 13888416 + 4.48 0.000 Intergenic L2c|LINE|L2 -36135 NM_001165034 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chr15-4359 chr15 41483813 41484023 + 4.48 0.000 TTS (NM_015138) TTS (NM_015138) -9956 NM_002220 3706 Hs.2722 NM_002220 ENSG00000137825 ITPKA IP3-3KA|IP3KA inositol-trisphosphate 3-kinase A protein-coding chr20-3774 chr20 20822149 20822359 + 4.48 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -109610 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr6-7442 chr6 54799129 54799339 + 4.48 0.000 Intergenic Intergenic -47537 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr2-11639 chr2 5463812 5464022 + 4.48 0.000 Intergenic Intergenic 227201 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr19-6141 chr19 4156866 4157076 + 4.48 0.000 intron (NM_001271995, intron 2 of 9) intron (NM_001271995, intron 2 of 9) 3340 NM_001271996 84699 Hs.247744 NM_032607 ENSG00000060566 CREB3L3 CREB-H|CREBH|HYST1481 cAMP responsive element binding protein 3 like 3 protein-coding chr2-13047 chr2 109195088 109195298 + 4.48 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -53605 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr16-6672 chr16 69747066 69747276 + 4.48 0.000 intron (NR_074074, intron 6 of 7) AluSc8|SINE|Alu 7755 NM_014062 28987 Hs.271695 NM_014062 ENSG00000141101 NOB1 ART-4|MST158|MSTP158|NOB1P|PSMD8BP1 NIN1 (RPN12) binding protein 1 homolog protein-coding chr1-15101 chr1 99801853 99802063 + 4.48 0.000 Intergenic MLT1A-int|LTR|ERVL-MaLR -35323 NM_001361041 391059 Hs.454779 NM_001013660 ENSG00000156869 FRRS1 SDFR2|SDR2 ferric chelate reductase 1 protein-coding chr5-7420 chr5 28260780 28260990 + 4.48 0.000 Intergenic AluSx3|SINE|Alu 26780 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr21-1333 chr21 24585087 24585297 + 4.48 0.000 Intergenic AluSp|SINE|Alu 156452 NR_135519 105372751 Hs.652040 NR_135519 ENSG00000237484 LINC01684 lnc-JAM2-6 long intergenic non-protein coding RNA 1684 ncRNA chr6-8066 chr6 122745624 122745834 + 4.48 0.000 Intergenic HERVE_a-int|LTR|ERV1 -3472 NM_001319042 2173 Hs.26770 NM_001446 ENSG00000164434 FABP7 B-FABP|BLBP|FABPB|MRG fatty acid binding protein 7 protein-coding chr4-7358 chr4 57956286 57956496 + 4.48 0.000 Intergenic Intergenic 530519 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr3-9885 chr3 82310960 82311170 + 4.48 0.000 intron (NR_147146, intron 3 of 8) AluSq|SINE|Alu 324923 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr10-6831 chr10 21843596 21843806 + 4.48 0.000 intron (NM_022365, intron 8 of 11) intron (NM_022365, intron 8 of 11) 160029 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chrX-4387 chrX 51222613 51222823 + 4.48 0.000 Intergenic Intergenic -51297 NR_110382 101926971 Hs.657995 NR_110382 ENSG00000230317 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA chr3-7305 chr3 15875240 15875450 + 4.48 0.000 Intergenic Intergenic 1574 NR_030289 693148 NR_030289 ENSG00000207815 MIR563 MIRN563|hsa-mir-563 microRNA 563 ncRNA chr1-11247 chr1 248849546 248849756 + 4.48 0.000 TTS (NM_001350072) TTS (NM_001350072) 9434 NM_001136036 55657 Hs.377705 NM_017865 ENSG00000171163 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding chr5-6538 chr5 10458761 10458971 + 4.48 0.000 intron (NM_001201466, intron 4 of 5) intron (NM_001201466, intron 4 of 5) 16987 NM_001201466 83853 Hs.381089 NM_031916 ENSG00000145491 ROPN1L ASP|RSPH11 rhophilin associated tail protein 1 like protein-coding chr4-8409 chr4 152102813 152103023 + 4.48 0.000 intron (NR_121627, intron 2 of 2) MamRep605|LTR?|LTR? 2100 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr1-13163 chr1 202948211 202948421 + 4.48 0.000 exon (NM_001290629, exon 4 of 9) exon (NM_001290629, exon 4 of 9) 9668 NM_001290553 51094 Hs.5298 NM_015999 ENSG00000159346 ADIPOR1 ACDCR1|CGI-45|CGI45|PAQR1|TESBP1A adiponectin receptor 1 protein-coding chr4-8505 chr4 161274560 161274770 + 4.48 0.000 Intergenic AluSx|SINE|Alu -748068 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr15-4671 chr15 65077777 65077987 + 4.48 0.000 exon (NM_001101362, exon 1 of 1) exon (NM_001101362, exon 1 of 1) 1066 NM_001101362 390594 Hs.586890 NM_001101362 ENSG00000234438 KBTBD13 HCG1645727|NEM6 kelch repeat and BTB domain containing 13 protein-coding chr2-14146 chr2 203517200 203517410 + 4.48 0.000 intron (NM_001329728, intron 1 of 15) L1MCa|LINE|L1 17996 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr14-3880 chr14 91160246 91160456 + 4.48 0.000 exon (NM_001358310, exon 3 of 14) exon (NM_001358310, exon 3 of 14) 33925 NR_003709 100124539 Hs.693444 NR_003709 ENSG00000221102 SNORA11B - small nucleolar RNA, H/ACA box 11B snoRNA chr12-7941 chr12 109237267 109237477 + 4.48 0.000 exon (NM_001093, exon 34 of 53) exon (NM_001093, exon 34 of 53) 71912 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr6-8439 chr6 152768638 152768848 + 4.48 0.000 Intergenic Intergenic 17946 NM_194435 7432 Hs.53973 NM_003381 ENSG00000146469 VIP PHM27 vasoactive intestinal peptide protein-coding chr6-7250 chr6 41747217 41747427 + 4.48 0.000 promoter-TSS (NM_002630) promoter-TSS (NM_002630) 75 NM_002630 5225 Hs.1867 NM_002630 ENSG00000096088 PGC PEPC|PGII progastricsin protein-coding chr1-7873 chr1 109775430 109775640 + 4.48 0.000 Intergenic Intergenic -11612 NM_001319952 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr15-4288 chr15 38114590 38114800 + 4.48 0.000 Intergenic Intergenic -41705 NR_147200 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr7-9577 chr7 146773250 146773460 + 4.48 0.000 promoter-TSS (NM_014141).2 promoter-TSS (NM_014141).2 -916 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr3-9117 chr3 30183234 30183444 + 4.48 0.000 Intergenic Intergenic -249183 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr11-9089 chr11 31397203 31397413 + 4.48 0.000 intron (NM_181706, intron 2 of 4) intron (NM_181706, intron 2 of 4) 27448 NM_181706 120526 Hs.187269 NM_181706 ENSG00000170946 DNAJC24 DPH4|JJJ3|ZCSL3 DnaJ heat shock protein family (Hsp40) member C24 protein-coding chr2-13164 chr2 119972328 119972538 + 4.48 0.000 intron (NM_002830, intron 26 of 26) L1MB7|LINE|L1 -40644 NM_001330310 57669 Hs.369232 NM_020909 ENSG00000115109 EPB41L5 BE37|YMO1|YRT erythrocyte membrane protein band 4.1 like 5 protein-coding chr4-6115 chr4 18672029 18672239 + 4.48 0.000 Intergenic Intergenic -650259 NR_158565 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr6-6961 chr6 17693055 17693265 + 4.48 0.000 intron (NM_005124, intron 1 of 21) intron (NM_005124, intron 1 of 21) -12970 NR_134616 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr18-2551 chr18 2992026 2992236 + 4.48 0.000 intron (NM_014646, intron 1 of 19) L1MB4|LINE|L1 19816 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr8-7331 chr8 134032599 134032809 + 4.48 0.000 Intergenic LTR79|LTR|ERVL 146208 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr1-12055 chr1 116697747 116697957 + 4.48 0.000 intron (NR_149353, intron 2 of 3) intron (NR_149353, intron 2 of 3) 3740 NR_149353 388667 Hs.127851 NR_149353 ENSG00000203864 C1orf137 - chromosome 1 open reading frame 137 (putative) ncRNA chr1-13791 chr1 18233727 18233937 + 4.48 0.000 intron (NM_032880, intron 2 of 9) intron (NM_032880, intron 2 of 9) 126034 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr15-4127 chr15 80435403 80435613 + 4.48 0.000 intron (NM_014862, intron 1 of 18) intron (NM_014862, intron 1 of 18) 31126 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr18-3394 chr18 60984535 60984745 + 4.48 0.000 Intergenic MER20B|DNA|hAT-Charlie -348790 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr12-8276 chr12 125429823 125430033 + 4.48 0.000 intron (NM_052907, intron 3 of 8) L1MC3|LINE|L1 103312 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr7-8933 chr7 95891539 95891749 + 4.48 0.000 intron (NM_004411, intron 6 of 16) intron (NM_004411, intron 6 of 16) 119138 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr5-4161 chr5 97083305 97083515 + 4.48 0.000 Intergenic L1ME3G|LINE|L1 59201 NM_153234 167410 Hs.656702 NM_153234 ENSG00000145721 LIX1 C5orf11|Lft limb and CNS expressed 1 protein-coding chr10-7587 chr10 18886660 18886870 + 4.48 0.000 Intergenic Intergenic -162036 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr20-3172 chr20 43697913 43698123 + 4.48 0.000 intron (NM_001278610, intron 5 of 12) L1ME1|LINE|L1 28984 NM_176791 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr22-4322 chr22 50594546 50594756 + 4.48 0.000 intron (NR_110536, intron 3 of 3) AluSz|SINE|Alu -6142 NM_012324 23542 Hs.558180 NM_012324 ENSG00000008735 MAPK8IP2 IB-2|IB2|JIP2|PRKM8IPL mitogen-activated protein kinase 8 interacting protein 2 protein-coding chr1-11594 chr1 207451788 207451998 + 4.48 0.000 Intergenic L1MC4a|LINE|L1 -2407 NM_001006658 1380 Hs.445757 NM_001877 ENSG00000117322 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement C3d receptor 2 protein-coding chr15-3215 chr15 73308437 73308647 + 4.48 0.000 Intergenic Intergenic 8632 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr5-6310 chr5 126253302 126253512 + 4.48 0.000 Intergenic Intergenic 31768 NR_105040 101927488 Hs.432319 NR_105039 LOC101927488 - uncharacterized LOC101927488 ncRNA chr8-6809 chr8 96362968 96363178 + 4.48 0.000 Intergenic AluJb|SINE|Alu 23575 NR_125829 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr7-5748 chr7 74226801 74227011 + 4.48 0.000 intron (NM_032463, intron 13 of 13) L2a|LINE|L2 16900 NM_032463 7462 Hs.741249 NM_014146 ENSG00000086730 LAT2 HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 linker for activation of T cells family member 2 protein-coding chr4-6005 chr4 190179802 190180012 + 4.48 0.000 intron (NR_137167, intron 2 of 5) BSR/Beta|Satellite|Satellite 6133 NM_001363820 100288687 Hs.728749 NM_001205218 ENSG00000260596 DUX4 DUX4L double homeobox 4 protein-coding chr6-5957 chr6 80021391 80021601 + 4.48 0.000 intron (NM_003318, intron 10 of 21) LTR38|LTR|ERV1 16847 NM_003318 7272 Hs.169840 NM_003318 ENSG00000112742 TTK CT96|ESK|MPH1|MPS1|MPS1L1|PYT TTK protein kinase protein-coding chr4-6603 chr4 919887 920097 + 4.48 0.000 intron (NM_005255, intron 1 of 27) AluJo|SINE|Alu 12324 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr4-6101 chr4 14251666 14251876 + 4.48 0.000 Intergenic Intergenic 139803 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr20-4202 chr20 46485851 46486061 + 4.48 0.000 Intergenic Intergenic -20664 NR_026640 7686 Hs.717103 NR_026640 ENSG00000225849 MKRN7P MKRNP3|ZNF127L5|dJ981L23.2 makorin ring finger protein 7, pseudogene pseudo chr4-8178 chr4 130859597 130859807 + 4.48 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 483341 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr4-8666 chr4 178669906 178670116 + 4.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -762075 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr1-16236 chr1 209660068 209660278 + 4.48 0.000 Intergenic Intergenic -7748 NM_000228 3914 Hs.497636 NM_000228 ENSG00000196878 LAMB3 AI1A|BM600-125KDA|LAM5|LAMNB1 laminin subunit beta 3 protein-coding chrX-1529 chrX 29150859 29151069 + 4.48 0.000 intron (NM_014271, intron 2 of 10) MIRb|SINE|MIR -423314 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr2-8720 chr2 158079109 158079319 + 4.48 0.000 intron (NM_001135098, intron 2 of 8) THE1D|LTR|ERVL-MaLR -22656 NM_173355 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr1-15270 chr1 114765482 114765692 + 4.48 0.000 Intergenic THE1C|LTR|ERVL-MaLR -7537 NM_001242891 7812 Hs.69855 NM_007158 ENSG00000009307 CSDE1 D1S155E|UNR cold shock domain containing E1 protein-coding chr9-7440 chr9 25746192 25746402 + 4.48 0.000 Intergenic L1M5|LINE|L1 -33759 NR_121604 101929582 Hs.140547 NR_121604 ENSG00000236306 LINC01241 - long intergenic non-protein coding RNA 1241 ncRNA chr2-14366 chr2 218993234 218993444 + 4.48 0.000 promoter-TSS (NM_057094) promoter-TSS (NM_057094) 83 NM_057094 1412 Hs.415790 NM_057093 ENSG00000163499 CRYBA2 CTRCT42 crystallin beta A2 protein-coding chr13-3409 chr13 97109952 97110162 + 4.48 0.000 Intergenic Intergenic 69565 NR_125725 103625683 Hs.679591 NR_125725 ENSG00000233124 LINC00456 - long intergenic non-protein coding RNA 456 ncRNA chr6-6204 chr6 15131715 15131925 + 4.48 0.000 Intergenic Intergenic -114249 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr11-10082 chr11 85467446 85467656 + 4.48 0.000 intron (NM_001142699, intron 3 of 27) L1PA4|LINE|L1 159719 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr19-6933 chr19 46547613 46547823 + 4.48 0.000 intron (NM_001370550, intron 1 of 2) AluSg|SINE|Alu -51851 NM_020709 57469 Hs.7193 NM_020709 ENSG00000204851 PNMA8B PNMAL2 PNMA family member 8B protein-coding chr7-7143 chr7 2919284 2919494 + 4.48 0.000 exon (NM_032415, exon 18 of 25) exon (NM_032415, exon 18 of 25) -75081 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr7-9575 chr7 146371214 146371424 + 4.48 0.000 Intergenic Intergenic -402952 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr6-6660 chr6 160467751 160467961 + 4.48 0.000 intron (NR_028092, intron 9 of 9) intron (NR_028092, intron 9 of 9) 43268 NR_028093 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr12-7026 chr12 34110280 34110490 + 4.48 0.000 Intergenic MER11D|LTR|ERVK 87889 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr1-13922 chr1 22642526 22642736 + 4.48 0.000 Intergenic Intergenic -1002 NM_172369 714 Hs.467753 NM_172369 ENSG00000159189 C1QC C1Q-C|C1QG complement C1q C chain protein-coding chr20-4048 chr20 37380302 37380512 + 4.48 0.000 intron (NM_198291, intron 2 of 13) MIR|SINE|MIR 34279 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr12-2885 chr12 33002133 33002343 + 4.48 0.000 Intergenic L1MA5|LINE|L1 -105392 NM_001005242 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr3-8887 chr3 11180284 11180494 + 4.48 0.000 intron (NM_001098212, intron 1 of 1) MER1B|DNA|hAT-Charlie 25896 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr19-7059 chr19 53546991 53547201 + 4.48 0.000 intron (NM_001317113, intron 2 of 4) L1MA7|LINE|L1 -7403 NM_001253801 55422 Hs.185674 NM_018555 ENSG00000130844 ZNF331 RITA|ZNF361|ZNF463 zinc finger protein 331 protein-coding chr5-8994 chr5 164399297 164399507 + 4.48 0.000 Intergenic AluSc|SINE|Alu 68000 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr20-4358 chr20 56055209 56055419 + 4.48 0.000 Intergenic L1PA7|LINE|L1 -49795 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr3-9612 chr3 57221795 57222005 + 4.48 0.000 Intergenic AluSx4|SINE|Alu -5829 NM_012096 26060 Hs.476415 NM_012096 ENSG00000157500 APPL1 APPL|DIP13alpha|MODY14 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 protein-coding chr21-877 chr21 43107455 43107665 + 4.48 0.000 promoter-TSS (NM_001025204).2 promoter-TSS (NM_001025204).2 10 NM_001320650 102724594 Hs.365116 NM_001320646 ENSG00000275895 U2AF1L5 - U2 small nuclear RNA auxiliary factor 1 like 5 protein-coding chr12-7981 chr12 111138044 111138254 + 4.48 0.000 intron (NM_001370598, intron 1 of 21) intron (NM_001370598, intron 1 of 21) 38145 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr18-1572 chr18 33378233 33378443 + 4.48 0.000 intron (NM_001308126, intron 5 of 23) L1PA16|LINE|L1 62233 NM_001371121 chr16-5531 chr16 25512240 25512450 + 4.48 0.000 Intergenic MLT1H1-int|LTR|ERVL-MaLR -179614 NM_006040 9951 Hs.655275 NM_006040 ENSG00000182601 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate-glucosamine 3-sulfotransferase 4 protein-coding chr18-2284 chr18 76822728 76822938 + 4.48 0.000 promoter-TSS (NR_040024) promoter-TSS (NR_040024) 226 NM_001306089 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr11-9026 chr11 26003906 26004116 + 4.48 0.000 Intergenic HERV17-int|LTR|ERV1 -185112 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr14-3957 chr14 21643416 21643626 + 4.48 0.000 Intergenic Intergenic -8581 NM_001005466 26534 Hs.554580 NM_001005466 ENSG00000255582 OR10G2 OR14-41 olfactory receptor family 10 subfamily G member 2 protein-coding chr6-8032 chr6 119394373 119394583 + 4.48 0.000 Intergenic LTR1D1|LTR|ERV1 -44717 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chr17-8141 chr17 59283418 59283628 + 4.48 0.000 Intergenic Intergenic -48132 NM_001005404 388403 Hs.463613 NM_001005404 ENSG00000175155 YPEL2 FKSG4 yippee like 2 protein-coding chr6-7202 chr6 39276418 39276628 + 4.48 0.000 Intergenic Intergenic 37896 NM_001135111 89822 Hs.162282 NM_031460 ENSG00000124780 KCNK17 K2p17.1|TALK-2|TALK2|TASK-4|TASK4 potassium two pore domain channel subfamily K member 17 protein-coding chr6-6272 chr6 36117258 36117468 + 4.48 0.000 Intergenic L2b|LINE|L2 -13150 NM_002754 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr20-4426 chr20 60565682 60565892 + 4.48 0.000 Intergenic Intergenic 1225 NR_039653 100616440 NR_039653 ENSG00000265617 MIR548AG2 - microRNA 548ag-2 ncRNA chr5-3003 chr5 5497216 5497426 + 4.48 0.000 Intergenic Intergenic 74644 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr7-6776 chr7 21461201 21461411 + 4.48 0.000 intron (NM_003112, intron 3 of 5) LTR12C|LTR|ERV1 -9752 NR_031594 100302122 NR_031594 ENSG00000221783 MIR1183 MIRN1183|hsa-mir-1183 microRNA 1183 ncRNA chr7-4980 chr7 151827636 151827846 + 4.48 0.000 intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -12870 NM_001040633 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr8-7237 chr8 127647782 127647992 + 4.48 0.000 Intergenic L1MD2|LINE|L1 86080 NR_117102 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLO7|CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility 11 ncRNA chr5-8407 chr5 126796446 126796656 + 4.48 0.000 intron (NR_134488, intron 1 of 11) intron (NR_134488, intron 1 of 11) 19415 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr18-2604 chr18 23278253 23278463 + 4.48 0.000 Intergenic Intergenic 122533 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr21-1611 chr21 18209016 18209226 + 4.48 0.000 intron (NM_001204178, intron 2 of 5) L1M1|LINE|L1 -35712 NM_024944 140578 Hs.283725 NM_024944 ENSG00000154645 CHODL C21orf68|MT75|PRED12 chondrolectin protein-coding chr13-2946 chr13 41695049 41695259 + 4.48 0.000 intron (NM_015058, intron 29 of 44) intron (NM_015058, intron 29 of 44) -126759 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr19-7088 chr19 56070098 56070308 + 4.48 0.000 intron (NR_110741, intron 1 of 3) AluJo|SINE|Alu 3519 NR_110741 101928886 Hs.434652 NR_110741 ENSG00000267522 LINC01864 - long intergenic non-protein coding RNA 1864 ncRNA chr14-3354 chr14 90816257 90816467 + 4.48 0.000 promoter-TSS (NM_001010854) promoter-TSS (NM_001010854) 55 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr3-10752 chr3 156227057 156227267 + 4.48 0.000 intron (NR_046617, intron 1 of 3) intron (NR_046617, intron 1 of 3) 721 NR_046617 100874083 Hs.603823 NR_046617 ENSG00000240596 KCNAB1-AS2 - KCNAB1 antisense RNA 2 ncRNA chr9-7733 chr9 74431213 74431423 + 4.48 0.000 Intergenic Intergenic 59787 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr1-16272 chr1 212727871 212728081 + 4.48 0.000 3' UTR (NM_001297736, exon 4 of 4) 3' UTR (NM_001297736, exon 4 of 4) -28136 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr10-7427 chr10 5635944 5636154 + 4.48 0.000 Intergenic Intergenic 30546 NR_037164 79754 Hs.445899 NM_024701 ENSG00000196372 ASB13 - ankyrin repeat and SOCS box containing 13 protein-coding chr3-9912 chr3 86376367 86376577 + 4.48 0.000 Intergenic Intergenic -105471 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr19-4945 chr19 44820790 44821000 + 4.48 0.000 intron (NM_001013257, intron 13 of 13) intron (NM_001013257, intron 13 of 13) 11836 NM_001013257 4059 Hs.625725 NM_005581 ENSG00000187244 BCAM AU|CD239|LU|MSK19 basal cell adhesion molecule (Lutheran blood group) protein-coding chr12-4007 chr12 29010217 29010427 + 4.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -138956 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr14-4962 chr14 74962636 74962846 + 4.48 0.000 Intergenic Intergenic -6977 NM_001293643 5228 Hs.252820 NM_002632 ENSG00000119630 PGF D12S1900|PGFL|PIGF|PLGF|PlGF-2|SHGC-10760 placental growth factor protein-coding chr2-7076 chr2 169804135 169804345 + 4.48 0.000 intron (NM_003142, intron 2 of 11) intron (NM_003142, intron 2 of 11) 4938 NM_001294145 6741 Hs.632535 NM_003142 ENSG00000138385 SSB LARP3|La|La/SSB small RNA binding exonuclease protection factor La protein-coding chr7-5737 chr7 73593042 73593252 + 4.48 0.000 TTS (NM_032954) TTS (NM_032954) -14568 NM_001362662 26608 Hs.647044 NM_012453 ENSG00000106638 TBL2 WBSCR13|WS-betaTRP transducin beta like 2 protein-coding chr15-4948 chr15 78345646 78345856 + 4.48 0.000 intron (NM_004378, intron 3 of 3) intron (NM_004378, intron 3 of 3) 5398 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr6-8519 chr6 159423101 159423311 + 4.48 0.000 Intergenic Intergenic 39675 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA chr2-12659 chr2 74361679 74361889 + 4.48 0.000 intron (NM_004082, intron 31 of 31) MER94B|DNA|hAT-Blackjack 12951 NM_023019 1639 Hs.516111 NM_004082 ENSG00000204843 DCTN1 DAP-150|DP-150|P135 dynactin subunit 1 protein-coding chr10-9023 chr10 122653821 122654031 + 4.48 0.000 Intergenic Intergenic -18956 NM_001364461 112577516 NM_001364461 LOC112577516 - carbohydrate-binding protein AQN-1-like protein-coding chr3-4118 chr3 113998200 113998410 + 4.48 0.000 intron (NR_148531, intron 11 of 14) AluSp|SINE|Alu 50292 NM_001320468 254887 Hs.21902 NM_173570 ENSG00000184307 ZDHHC23 DHHC-23|NIDD zinc finger DHHC-type containing 23 protein-coding chr15-4182 chr15 98495148 98495358 + 4.48 0.000 intron (NM_182562, intron 2 of 6) L1MA5|LINE|L1 19083 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding chr1-16618 chr1 238769128 238769338 + 4.48 0.000 Intergenic Intergenic -283216 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr5-7133 chr5 1196040 1196250 + 4.48 0.000 Intergenic Intergenic -5450 NM_001003841 340024 Hs.481478 NM_001003841 ENSG00000174358 SLC6A19 B0AT1|HND solute carrier family 6 member 19 protein-coding chr7-8332 chr7 42575062 42575272 + 4.48 0.000 Intergenic Intergenic 131280 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr12-5729 chr12 123452108 123452318 + 4.48 0.000 Intergenic AluJb|SINE|Alu -5926 NM_022717 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chr20-4132 chr20 43223291 43223501 + 4.48 0.000 Intergenic L1MA9|LINE|L1 -33490 NM_007050 11122 Hs.526879 NM_007050 ENSG00000196090 PTPRT RPTPrho protein tyrosine phosphatase receptor type T protein-coding chr12-7890 chr12 106720880 106721090 + 4.48 0.000 intron (NM_001206691, intron 13 of 17) intron (NM_001206691, intron 13 of 17) 36256 NM_032491 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr3-9894 chr3 83327263 83327473 + 4.48 0.000 Intergenic AluY|SINE|Alu 1341226 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr2-10537 chr2 234602824 234603034 + 4.48 0.000 Intergenic AluY|SINE|Alu -79739 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr14-3614 chr14 54639632 54639842 + 4.48 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 72125 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr6-3905 chr6 68846097 68846307 + 4.48 0.000 intron (NM_001704, intron 3 of 31) THE1A-int|LTR|ERVL-MaLR 210920 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr16-6109 chr16 13793993 13794203 + 4.48 0.000 Intergenic Intergenic -126059 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr6-1917 chr6 37507765 37507975 + 4.48 0.000 intron (NR_126057, intron 1 of 3) G-rich|Low_complexity|Low_complexity 522 NR_126057 100505530 Hs.582978 NM_001039791 LINC02520 - long intergenic non-protein coding RNA 2520 ncRNA chr16-5954 chr16 4146548 4146758 + 4.48 0.000 Intergenic AluJo|SINE|Alu -30211 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr8-5208 chr8 114450086 114450296 + 4.48 0.000 Intergenic Intergenic -1013252 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr15-4575 chr15 59245623 59245833 + 4.48 0.000 intron (NM_004998, intron 4 of 27) intron (NM_004998, intron 4 of 27) 38885 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr18-3012 chr18 25547137 25547347 + 4.48 0.000 Intergenic AluYb8|SINE|Alu -195076 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr18-1884 chr18 28357854 28358064 + 4.48 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -180829 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-12642 chr2 73625398 73625608 + 4.48 0.000 Intergenic Intergenic 16919 NM_003960 9027 Hs.14637 NM_003960 ENSG00000144035 NAT8 ATase2|CCNAT|CML1|GLA|Hcml1|TSC501|TSC510 N-acetyltransferase 8 (putative) protein-coding chr20-1364 chr20 38982819 38983029 + 4.48 0.000 intron (NM_021931, intron 3 of 21) intron (NM_021931, intron 3 of 21) 20580 NR_033905 60625 Hs.444520 NM_021931 ENSG00000101452 DHX35 C20orf15|DDX35|KAIA0875 DEAH-box helicase 35 protein-coding chr3-3256 chr3 53045932 53046142 + 4.48 0.000 promoter-TSS (NM_016329) promoter-TSS (NM_016329) 36 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr2-12308 chr2 47084129 47084339 + 4.48 0.000 Intergenic Intergenic 71074 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr7-7459 chr7 90040783 90040993 + 4.48 0.000 intron (NR_110029, intron 2 of 2) MLT1D|LTR|ERVL-MaLR -78512 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr6-1939 chr6 99505523 99505733 + 4.48 0.000 intron (NR_144348, intron 4 of 12) AluSx1|SINE|Alu 9748 NM_001346033 85015 Hs.143410 NM_032929 ENSG00000123552 USP45 - ubiquitin specific peptidase 45 protein-coding chr17-6616 chr17 61946974 61947184 + 4.48 0.000 intron (NM_005121, intron 28 of 29) intron (NM_005121, intron 28 of 29) -19097 NM_001351695 57508 Hs.279646 NM_020748 ENSG00000108506 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding chr14-3090 chr14 64256412 64256622 + 4.48 0.000 intron (NR_073496, intron 5 of 7) AluSx1|SINE|Alu 26558 NM_001271876 2100 Hs.660607 NM_001437 ENSG00000140009 ESR2 ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8 estrogen receptor 2 protein-coding chr19-4243 chr19 51790773 51790983 + 4.48 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -4279 NM_002030 2359 Hs.445466 NM_002030 ENSG00000187474 FPR3 FML2_HUMAN|FMLP-R-II|FMLPY|FPRH1|FPRH2|FPRL2|RMLP-R-I formyl peptide receptor 3 protein-coding chr14-3467 chr14 101247658 101247868 + 4.48 0.000 Intergenic Intergenic 126907 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr2-13333 chr2 133408423 133408633 + 4.48 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 142333 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chrX-4791 chrX 98978568 98978778 + 4.48 0.000 Intergenic Intergenic -1414138 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr2-12397 chr2 54677089 54677299 + 4.48 0.000 Intergenic Intergenic -47818 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr4-5763 chr4 63613466 63613676 + 4.48 0.000 Intergenic L1PA11|LINE|L1 795879 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr4-5744 chr4 56355892 56356102 + 4.48 0.000 intron (NM_001286672, intron 5 of 10) intron (NM_001286672, intron 5 of 10) 31494 NM_001286668 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr9-7577 chr9 35936036 35936246 + 4.48 0.000 Intergenic Intergenic 22013 NM_019897 56656 Hs.553540 NM_019897 ENSG00000278889 OR2S2 OR37A|OST715 olfactory receptor family 2 subfamily S member 2 (gene/pseudogene) protein-coding chr12-4674 chr12 47792002 47792212 + 4.48 0.000 non-coding (NR_160436, exon 14 of 26) non-coding (NR_160436, exon 14 of 26) 18869 NM_017842 55652 Hs.438867 NM_017842 ENSG00000211584 SLC48A1 HRG-1|HRG1|hHRG-1 solute carrier family 48 member 1 protein-coding chr6-6175 chr6 7037167 7037377 + 4.48 0.000 Intergenic Intergenic -70471 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr3-5699 chr3 14513544 14513754 + 4.48 0.000 intron (NM_001080423, intron 13 of 23) intron (NM_001080423, intron 13 of 23) 26693 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chr17-7657 chr17 29937706 29937916 + 4.48 0.000 intron (NM_001145053, intron 1 of 14) ERVL-E-int|LTR|ERVL -3823 NR_026738 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr1-8353 chr1 58465914 58466124 + 4.48 0.000 Intergenic LTR16B2|LTR|ERVL 80707 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr2-13294 chr2 129261277 129261487 + 4.48 0.000 intron (NR_122042, intron 1 of 3) L1ME4a|LINE|L1 12509 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr7-8865 chr7 89977082 89977292 + 4.48 0.000 intron (NR_110029, intron 2 of 2) LTR84b|LTR|ERVL -142213 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr5-9196 chr5 179937959 179938169 + 4.48 0.000 Intergenic AluJb|SINE|Alu -30167 NM_198868 23061 Hs.155829 NM_015043 ENSG00000197226 TBC1D9B GRAMD9B TBC1 domain family member 9B protein-coding chr15-3975 chr15 46466837 46467047 + 4.48 0.000 Intergenic MER63A|DNA|hAT-Blackjack -717147 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr1-16298 chr1 215230047 215230257 + 4.48 0.000 intron (NM_001017424, intron 6 of 6) Tigger3a|DNA|TcMar-Tigger 147415 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr12-6949 chr12 26523873 26524083 + 4.48 0.000 intron (NM_002223, intron 37 of 56) intron (NM_002223, intron 37 of 56) 309216 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr4-7480 chr4 71760091 71760301 + 4.48 0.000 intron (NM_000583, intron 6 of 12) AluY|SINE|Alu 23883 NM_000583 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr7-7726 chr7 569484 569694 + 4.48 0.000 intron (NM_001164760, intron 9 of 10) intron (NM_001164760, intron 9 of 10) 7631 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chrX-2517 chrX 96310145 96310355 + 4.48 0.000 Intergenic HAL1|LINE|L1 27652 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr21-1754 chr21 35295108 35295318 + 4.48 0.000 Intergenic Intergenic -245915 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr2-10910 chr2 71933034 71933244 + 4.48 0.000 Intergenic Intergenic 214723 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr5-8995 chr5 164497089 164497299 + 4.48 0.000 intron (NR_105065, intron 2 of 3) intron (NR_105065, intron 2 of 3) 26915 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr14-4203 chr14 91427529 91427739 + 4.48 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -9814 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr1-9676 chr1 50053613 50053823 + 4.48 0.000 intron (NM_001324208, intron 1 of 6) L2a|LINE|L2 5663 NM_001324208 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding chr5-1591 chr5 14487456 14487666 + 4.48 0.000 non-coding (NR_134469, exon 48 of 57) non-coding (NR_134469, exon 48 of 57) 23578 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr11-7364 chr11 69233800 69234010 + 4.48 0.000 Intergenic Intergenic -60250 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr11-9220 chr11 39259454 39259664 + 4.48 0.000 Intergenic Intergenic 610701 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr15-3364 chr15 84840935 84841145 + 4.48 0.000 intron (NM_020778, intron 5 of 13) intron (NM_020778, intron 5 of 13) 24360 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 CMH27|MAK|MIDORI alpha kinase 3 protein-coding chr1-15479 chr1 155029298 155029508 + 4.48 0.000 intron (NM_144622, intron 7 of 14) intron (NM_144622, intron 7 of 14) 4378 NM_144622 127579 Hs.591491 NM_144622 ENSG00000163354 DCST2 - DC-STAMP domain containing 2 protein-coding chr17-3442 chr17 28759387 28759597 + 4.48 0.000 exon (NM_001288640, exon 3 of 3) exon (NM_001288640, exon 3 of 3) 15481 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr1-15585 chr1 160336236 160336446 + 4.48 0.000 intron (NM_001098398, intron 3 of 32) AluSx|SINE|Alu 6909 NM_001098398 1314 Hs.162121 NM_004371 ENSG00000122218 COPA AILJK|HEP-COP|alpha-COP coatomer protein complex subunit alpha protein-coding chr3-9294 chr3 42690597 42690807 + 4.48 0.000 intron (NM_152393, intron 4 of 5) G-rich|Low_complexity|Low_complexity 5165 NM_152393 131377 Hs.350288 NM_152393 ENSG00000157119 KLHL40 KBTBD5|NEM8|SRYP|SYRP kelch like family member 40 protein-coding chr20-3259 chr20 2679589 2679799 + 4.48 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -13086 NR_138537 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr20-3103 chr20 30919793 30920003 + 4.48 0.000 Intergenic LTR54B|LTR|ERV1 -337766 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr3-6119 chr3 53928198 53928408 + 4.48 0.000 Intergenic Intergenic -36444 NM_021237 58515 Hs.58471 NM_021237 ENSG00000113811 SELENOK HSPC030|HSPC297|SELK selenoprotein K protein-coding chr20-3640 chr20 9234890 9235100 + 4.48 0.000 intron (NM_182797, intron 1 of 35) L2a|LINE|L2 17605 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr1-16627 chr1 239430688 239430898 + 4.48 0.000 intron (NM_001347716, intron 1 of 7) (TTTTGCT)n|Simple_repeat|Simple_repeat 44225 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr14-4977 chr14 75442187 75442397 + 4.48 0.000 intron (NM_130469, intron 2 of 3) MER102c|DNA|hAT-Charlie 10158 NM_001135049 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chr4-3466 chr4 112732215 112732425 + 4.48 0.000 intron (NM_001354269, intron 1 of 43) AluJr|SINE|Alu 26302 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr1-14433 chr1 45464716 45464926 + 4.48 0.000 intron (NM_007170, intron 1 of 10) AluSz6|SINE|Alu 26342 NM_001320800 10420 Hs.591499 NM_007170 ENSG00000070759 TESK2 - testis associated actin remodelling kinase 2 protein-coding chr2-11903 chr2 24182798 24183008 + 4.48 0.000 intron (NM_001040710, intron 3 of 5) intron (NM_001040710, intron 3 of 5) 7850 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr2-11751 chr2 11455862 11456072 + 4.48 0.000 intron (NM_001278276, intron 2 of 7) intron (NM_001278276, intron 2 of 7) 10194 NM_001278276 1876 Hs.603093 NM_198256 ENSG00000169016 E2F6 E2F-6 E2F transcription factor 6 protein-coding chr8-1700 chr8 103438319 103438529 + 4.48 0.000 intron (NM_015420, intron 8 of 10) AluJb|SINE|Alu 23038 NM_015420 25879 Hs.532265 NM_015420 ENSG00000164934 DCAF13 GM83|HSPC064|Sof1|WDSOF1 DDB1 and CUL4 associated factor 13 protein-coding chr18-1801 chr18 12438558 12438768 + 4.48 0.000 intron (NR_136514, intron 3 of 5) intron (NR_136514, intron 3 of 5) 5889 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chrX-1045 chrX 107381976 107382186 + 4.48 0.000 Intergenic AluSq2|SINE|Alu -140369 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr2-8934 chr2 185585814 185586024 + 4.48 0.000 Intergenic L1PA2|LINE|L1 152800 NR_110216 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr18-3477 chr18 71135757 71135967 + 4.48 0.000 Intergenic Intergenic 443094 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr22-3925 chr22 36556809 36557019 + 4.48 0.000 Intergenic Intergenic -27748 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr13-2978 chr13 76543929 76544139 + 4.48 0.000 Intergenic L1M4b|LINE|L1 342371 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr8-6232 chr8 38611163 38611373 + 4.48 0.000 Intergenic Intergenic -10011 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr2-13055 chr2 109411015 109411225 + 4.48 0.000 intron (NM_001099289, intron 4 of 9) intron (NM_001099289, intron 4 of 9) -97495 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr13-3887 chr13 52313049 52313259 + 4.48 0.000 Intergenic Intergenic -21141 NR_120400 103191607 NR_120400 ENSG00000271564 LINC02333 - long intergenic non-protein coding RNA 2333 ncRNA chr6-3403 chr6 76615480 76615690 + 4.48 0.000 Intergenic L1M1|LINE|L1 -21962 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr8-7213 chr8 126539757 126539967 + 4.48 0.000 Intergenic Intergenic 18616 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr2-11997 chr2 27932579 27932789 + 4.48 0.000 intron (NM_199193, intron 4 of 13) intron (NM_199193, intron 4 of 13) -41570 NR_028308 100302650 Hs.729719 NR_028308 BABAM2-AS1 BRE-AS1 BABAM2 antisense RNA 1 ncRNA chr11-10016 chr11 80790263 80790473 + 4.48 0.000 Intergenic L1PA4|LINE|L1 -27565 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr8-5159 chr8 86552750 86552960 + 4.48 0.000 intron (NM_003909, intron 14 of 16) AluSq10|SINE|Alu 38420 NM_003909 8895 Hs.191219 NM_003909 ENSG00000085719 CPNE3 CPN3|PRO1071 copine 3 protein-coding chr6-4072 chr6 138767833 138768043 + 4.48 0.000 intron (NR_161205, intron 1 of 2) AluSc|SINE|Alu -5582 NM_015439 25901 Hs.412019 NM_015439 ENSG00000024862 CCDC28A C6orf80|CCRL1AP coiled-coil domain containing 28A protein-coding chr15-4008 chr15 57350500 57350710 + 4.48 0.000 Intergenic AluSc|SINE|Alu -25900 NM_032866 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr7-7151 chr7 4554387 4554597 + 4.48 0.000 Intergenic L1PA10|LINE|L1 -127803 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr22-3537 chr22 11859023 11859233 + 4.48 0.000 Intergenic SATR1|Satellite|Satellite -38278 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr2-12591 chr2 70787115 70787325 + 4.48 0.000 intron (NM_001004311, intron 2 of 4) intron (NM_001004311, intron 2 of 4) 3423 NM_001004311 344018 Hs.407636 NM_001004311 ENSG00000183733 FIGLA BHLHC8|FIGALPHA|POF6 folliculogenesis specific bHLH transcription factor protein-coding chr12-5654 chr12 80336202 80336412 + 4.48 0.000 intron (NM_001368062, intron 43 of 62) intron (NM_001368062, intron 43 of 62) -107928 NM_001145026 374462 Hs.539284 NM_001145026 ENSG00000139304 PTPRQ DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q protein tyrosine phosphatase receptor type Q protein-coding chr1-13014 chr1 161481864 161482074 + 4.48 0.000 Intergenic Intergenic -23488 NM_001136219 2212 Hs.352642 NM_021642 ENSG00000143226 FCGR2A CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2 Fc fragment of IgG receptor IIa protein-coding chr22-4252 chr22 48205592 48205802 + 4.48 0.000 Intergenic Intergenic -68667 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr2-10986 chr2 98976491 98976701 + 4.48 0.000 Intergenic L1M4b|LINE|L1 -40371 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr6-2442 chr6 170540495 170540705 + 4.48 0.000 intron (NM_002793, intron 4 of 5) HAL1|LINE|L1 12707 NM_002793 5689 Hs.352768 NM_002793 ENSG00000008018 PSMB1 HC5|PMSB1|PSC5 proteasome subunit beta 1 protein-coding chr7-9164 chr7 113580549 113580759 + 4.48 0.000 Intergenic L2a|LINE|L2 338355 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr10-4946 chr10 26889911 26890121 + 4.48 0.000 Intergenic LTR49|LTR|ERV1 -28929 NM_001178120 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr12-7697 chr12 90233428 90233638 + 4.48 0.000 Intergenic Charlie7|DNA|hAT-Charlie -59785 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr4-6898 chr4 14130516 14130726 + 4.48 0.000 intron (NR_033931, intron 2 of 2) intron (NR_033931, intron 2 of 2) 18653 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr6-6931 chr6 15429154 15429364 + 4.48 0.000 intron (NM_004973, intron 3 of 17) AluJr|SINE|Alu 180404 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr3-10288 chr3 125131028 125131238 + 4.48 0.000 intron (NM_001195483, intron 5 of 12) MamGypLTR1c|LTR|Gypsy 20419 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr1-12282 chr1 231162212 231162422 + 4.48 0.000 promoter-TSS (NM_001004342) promoter-TSS (NM_001004342) -611 NM_001004342 440730 Hs.655089 NM_001004342 ENSG00000119283 TRIM67 TNL tripartite motif containing 67 protein-coding chr7-8315 chr7 41383708 41383918 + 4.48 0.000 Intergenic Intergenic 282209 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr3-9844 chr3 78566921 78567131 + 4.48 0.000 Intergenic Intergenic 452433 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr21-1639 chr21 22902895 22903105 + 4.48 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -176284 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA chr4-7502 chr4 74117293 74117503 + 4.48 0.000 Intergenic Intergenic -5875 NM_001351311 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr12-5577 chr12 21764933 21765143 + 4.48 0.000 TTS (NM_004982) TTS (NM_004982) 9668 NM_004982 3764 Hs.102308 NM_004982 ENSG00000121361 KCNJ8 KIR6.1|uKATP-1 potassium voltage-gated channel subfamily J member 8 protein-coding chr12-8355 chr12 132012970 132013180 + 4.48 0.000 exon (NM_015409, exon 17 of 53) exon (NM_015409, exon 17 of 53) -18149 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr18-3364 chr18 58393024 58393234 + 4.48 0.000 intron (NM_001144965, intron 30 of 30) intron (NM_001144965, intron 30 of 30) -57945 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chrX-3292 chrX 105138363 105138573 + 4.48 0.000 intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 82225 NM_001291277 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr4-8776 chr4 188819359 188819569 + 4.48 0.000 Intergenic Intergenic 42807 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr10-5155 chr10 53789446 53789656 + 4.48 0.000 Intergenic Intergenic -696679 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr3-5526 chr3 14190 14400 + 4.48 0.000 intron (NR_110824, intron 1 of 3) A-rich|Low_complexity|Low_complexity 2544 NR_110824 102723448 Hs.543290 NR_110824 LINC01986 - long intergenic non-protein coding RNA 1986 ncRNA chr7-6903 chr7 73612549 73612759 + 4.48 0.000 intron (NM_032951, intron 2 of 16) AluSp|SINE|Alu 11868 NM_032954 51085 Hs.647055 NM_032951 ENSG00000009950 MLXIPL CHREBP|MIO|MLX|MONDOB|WBSCR14|WS-bHLH|bHLHd14 MLX interacting protein like protein-coding chr5-3766 chr5 61261593 61261803 + 4.48 0.000 intron (NR_146624, intron 1 of 2) MLT1C|LTR|ERVL-MaLR 3231 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr13-3190 chr13 111436748 111436958 + 4.48 0.000 Intergenic Intergenic 116211 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr9-8832 chr9 135393691 135393901 + 4.48 0.000 Intergenic Intergenic 50547 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr9-3571 chr9 72841079 72841289 + 4.48 0.000 Intergenic SVA_F|Retroposon|SVA 32925 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chrX-3533 chrX 53576647 53576857 + 4.48 0.000 intron (NM_031407, intron 44 of 83) L2c|LINE|L2 -19478 NR_029484 406889 NR_029484 ENSG00000208012 MIRLET7F2 LET7F2|MIRNLET7F2|let-7f-2 microRNA let-7f-2 ncRNA chr22-3280 chr22 46964719 46964929 + 4.48 0.000 intron (NR_104292, intron 10 of 13) intron (NR_104292, intron 10 of 13) -48782 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr9-3460 chr9 3232687 3232897 + 4.48 0.000 intron (NM_134428, intron 16 of 17) (GA)n|Simple_repeat|Simple_repeat 51203 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr14-3875 chr14 89856207 89856417 + 4.48 0.000 intron (NM_001284269, intron 5 of 5) AluJb|SINE|Alu 98224 NM_001284268 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding chr12-3914 chr12 129025095 129025305 + 4.48 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -84490 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 TMEM132D-AS1 - TMEM132D antisense RNA 1 ncRNA chrX-4666 chrX 82190806 82191016 + 4.48 0.000 Intergenic Intergenic 988809 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr5-6245 chr5 91135091 91135301 + 4.48 0.000 intron (NR_003149, intron 87 of 89) AluSz|SINE|Alu 179206 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr13-4437 chr13 111491324 111491534 + 4.48 0.000 Intergenic (TCTC)n|Simple_repeat|Simple_repeat -104580 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr7-8697 chr7 74220048 74220258 + 4.48 0.000 intron (NM_032463, intron 6 of 13) intron (NM_032463, intron 6 of 13) 10147 NM_032463 7462 Hs.741249 NM_014146 ENSG00000086730 LAT2 HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 linker for activation of T cells family member 2 protein-coding chr11-8392 chr11 93772152 93772362 + 4.48 0.000 Intergenic MER52D|LTR|ERV1 -12025 NM_004268 9440 Hs.444931 NM_004268 ENSG00000042429 MED17 CRSP6|CRSP77|DRIP80|SRB4|TRAP80 mediator complex subunit 17 protein-coding chr10-6231 chr10 60502114 60502324 + 4.48 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 70737 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr10-8827 chr10 109731651 109731861 + 4.48 0.000 Intergenic L1PA6|LINE|L1 191490 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr1-14960 chr1 88253713 88253923 + 4.48 0.000 Intergenic L1ME2|LINE|L1 -430326 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr4-5912 chr4 141301357 141301567 + 4.48 0.000 Intergenic L4_A_Mam|LINE|RTE-X 31155 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr7-3068 chr7 157138622 157138832 + 4.48 0.000 promoter-TSS (NM_014671) promoter-TSS (NM_014671) -199 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr4-8225 chr4 138078131 138078341 + 4.48 0.000 intron (NR_037866, intron 7 of 10) intron (NR_037866, intron 7 of 10) -10778 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr11-9989 chr11 78392485 78392695 + 4.48 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) 25230 NM_080491 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr5-7326 chr5 16297914 16298124 + 4.48 0.000 Intergenic L1PA13|LINE|L1 117778 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA chr19-4165 chr19 39119950 39120160 + 4.48 0.000 Intergenic Intergenic -5731 NM_001014835 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr8-4859 chr8 42178215 42178425 + 4.48 0.000 intron (NM_001319189, intron 11 of 11) AluSp|SINE|Alu 25257 NM_006803 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr11-10749 chr11 133546410 133546620 + 4.48 0.000 Intergenic Intergenic -14014 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr18-3022 chr18 26403246 26403456 + 4.48 0.000 Intergenic Intergenic -19644 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr8-5044 chr8 24185666 24185876 + 4.48 0.000 Intergenic Intergenic -108269 NM_021777 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr9-6372 chr9 22871639 22871849 + 4.48 0.000 Intergenic MSTA|LTR|ERVL-MaLR 225544 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr5-7063 chr5 171583516 171583726 + 4.48 0.000 Intergenic Intergenic 163974 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chrX-1326 chrX 132634785 132634995 + 4.48 0.000 intron (NM_147175, intron 3 of 3) MER70A|LTR|ERVL -32752 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr2-12056 chr2 30804446 30804656 + 4.48 0.000 intron (NM_144575, intron 1 of 22) MER103C|DNA|hAT-Charlie 2895 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr14-3429 chr14 98034778 98034988 + 4.48 0.000 Intergenic MIR3|SINE|MIR -56759 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr2-11860 chr2 21822695 21822905 + 4.48 0.000 Intergenic MIRb|SINE|MIR -112148 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr17-8066 chr17 51530034 51530244 + 4.48 0.000 Intergenic L1PB1|LINE|L1 94712 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr6-7634 chr6 79799369 79799579 + 4.48 0.000 Intergenic MIRb|SINE|MIR 12772 NR_131786 89758 Hs.288213 NM_001243308 LINC01621 C6orf7 long intergenic non-protein coding RNA 1621 ncRNA chr17-7404 chr17 8869424 8869634 + 4.48 0.000 Intergenic Intergenic -1852 NM_001290211 146850 Hs.255809 NM_001010855 ENSG00000276231 PIK3R6 C17orf38|HsT41028|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase regulatory subunit 6 protein-coding chr19-4924 chr19 43451362 43451572 + 4.48 0.000 Intergenic AluYa5|SINE|Alu 14141 NM_014400 27076 Hs.631594 NM_014400 ENSG00000124466 LYPD3 C4.4A LY6/PLAUR domain containing 3 protein-coding chr10-6166 chr10 5665927 5666137 + 4.48 0.000 intron (NR_037164, intron 1 of 6) CpG 563 NR_037164 79754 Hs.445899 NM_024701 ENSG00000196372 ASB13 - ankyrin repeat and SOCS box containing 13 protein-coding chr16-4159 chr16 5655761 5655971 + 4.48 0.000 Intergenic L2b|LINE|L2 23399 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA chr9-7652 chr9 68515487 68515697 + 4.48 0.000 intron (NM_021965, intron 10 of 10) intron (NM_021965, intron 10 of 10) 25275 NM_153237 169693 Hs.663056 NM_153237 ENSG00000181778 TMEM252 C9orf71 transmembrane protein 252 protein-coding chr13-4349 chr13 103029769 103029979 + 4.48 0.000 Intergenic L1MA8|LINE|L1 36543 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr22-2547 chr22 26062220 26062430 + 4.48 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -107137 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr15-5041 chr15 84101568 84101778 + 4.48 0.000 intron (NR_036652, intron 4 of 9) MIRb|SINE|MIR 21486 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr8-5252 chr8 132553558 132553768 + 4.48 0.000 Intergenic Intergenic 7816 NR_026684 93668 Hs.545218 NR_026684 ENSG00000253521 HPYR1 HPRG1|LINC00027|NCRNA00027 Helicobacter pylori responsive 1 ncRNA chr10-7442 chr10 6634830 6635040 + 4.48 0.000 promoter-TSS (NR_039659).2 promoter-TSS (NR_039659).2 -135 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr8-5653 chr8 111164688 111164898 + 4.48 0.000 intron (NR_125418, intron 1 of 3) AluSx4|SINE|Alu 71410 NR_125418 101927487 Hs.630004 NR_125418 ENSG00000253103 LINC01609 - long intergenic non-protein coding RNA 1609 ncRNA chr18-2384 chr18 76398937 76399147 + 4.48 0.000 intron (NM_014643, intron 3 of 6) intron (NM_014643, intron 3 of 6) -92610 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr16-3728 chr16 6699081 6699291 + 4.48 0.000 intron (NM_018723, intron 3 of 15) intron (NM_018723, intron 3 of 15) -74623 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr3-6990 chr3 169338422 169338632 + 4.48 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -109340 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr22-2240 chr22 25552647 25552857 + 4.48 0.000 Intergenic AluJr|SINE|Alu -11923 NM_001362778 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr15-4090 chr15 73209968 73210178 + 4.48 0.000 intron (NM_002499, intron 7 of 28) intron (NM_002499, intron 7 of 28) -89837 NR_162148 113219462 NR_162148 MIR12135 - microRNA 12135 ncRNA chr2-6860 chr2 74294597 74294807 + 4.48 0.000 intron (NM_133478, intron 7 of 30) AluSz6|SINE|Alu 20323 NM_021196 57835 Hs.594099 NM_021196 ENSG00000188687 SLC4A5 NBC4|NBCe2 solute carrier family 4 member 5 protein-coding chrX-887 chrX 30750286 30750496 + 4.48 0.000 Intergenic AluJr|SINE|Alu -84232 NR_145449 727682 NR_145449 TAB3-AS1 CXorf29 TAB3 antisense RNA 1 ncRNA chrX-1449 chrX 73996757 73996967 + 4.48 0.000 intron (NR_024582, intron 3 of 4) AluSz|SINE|Alu 52538 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator ncRNA chr7-6768 chr7 15661766 15661976 + 4.48 0.000 intron (NM_005924, intron 1 of 2) intron (NM_005924, intron 1 of 2) -6076 NR_134258 105375166 Hs.658822 NR_134258 ENSG00000237070 LOC105375166 - uncharacterized LOC105375166 ncRNA chr3-6330 chr3 79517924 79518134 + 4.48 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) 10142 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA chrX-4320 chrX 45077597 45077807 + 4.48 0.000 intron (NR_111960, intron 17 of 27) intron (NR_111960, intron 17 of 27) 123174 NM_176819 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr10-6486 chr10 48771207 48771417 + 4.48 0.000 intron (NM_020945, intron 13 of 61) intron (NM_020945, intron 13 of 61) 85849 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr18-3001 chr18 24664062 24664272 + 4.48 0.000 Intergenic Intergenic 35985 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr12-7073 chr12 42445422 42445632 + 4.48 0.000 intron (NM_016488, intron 11 of 12) HERVK22-int|LTR|ERVK 38088 NM_001144881 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr9-6434 chr9 75549934 75550144 + 4.48 0.000 Intergenic Intergenic -340605 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr5-6392 chr5 142563722 142563932 + 4.48 0.000 Intergenic L1ME1|LINE|L1 57507 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr16-6181 chr16 25832504 25832714 + 4.48 0.000 intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) 140650 NM_006040 9951 Hs.655275 NM_006040 ENSG00000182601 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate-glucosamine 3-sulfotransferase 4 protein-coding chr1-16458 chr1 228004755 228004965 + 4.48 0.000 Intergenic Intergenic -2138 NM_033131 89780 Hs.336930 NM_033131 ENSG00000154342 WNT3A - Wnt family member 3A protein-coding chr7-7493 chr7 100627559 100627769 + 4.48 0.000 intron (NM_003227, intron 14 of 17) intron (NM_003227, intron 14 of 17) 5986 NM_001206855 7036 Hs.544932 NM_003227 ENSG00000106327 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding chr15-3592 chr15 55399339 55399549 + 4.48 0.000 intron (NR_037923, intron 8 of 15) AluSx1|SINE|Alu 8915 NM_004748 9236 Hs.285051 NM_004748 ENSG00000260916 CCPG1 CPR8 cell cycle progression 1 protein-coding chr19-4887 chr19 40634412 40634622 + 4.48 0.000 Intergenic Intergenic 33148 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chr10-8414 chr10 84546976 84547186 + 4.48 0.000 Intergenic AluSx1|SINE|Alu 121912 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr2-9822 chr2 148880833 148881043 + 4.48 0.000 intron (NM_004522, intron 1 of 25) intron (NM_004522, intron 1 of 25) 5711 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr3-10813 chr3 161879675 161879885 + 4.48 0.000 Intergenic L1PA16|LINE|L1 382972 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr1-16419 chr1 225954769 225954979 + 4.48 0.000 Intergenic Intergenic -13382 NM_001172425 7044 Hs.520187 NM_003240 ENSG00000143768 LEFTY2 EBAF|LEFTA|LEFTYA|TGFB4 left-right determination factor 2 protein-coding chr2-9788 chr2 117262549 117262759 + 4.48 0.000 Intergenic L1M3a|LINE|L1 -552037 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr10-7776 chr10 34975812 34976022 + 4.48 0.000 Intergenic Intergenic 98366 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr17-6940 chr17 42639060 42639270 + 4.48 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -20119 NM_001320509 27175 Hs.279669 NM_016437 ENSG00000037042 TUBG2 - tubulin gamma 2 protein-coding chr2-10214 chr2 102646646 102646856 + 4.48 0.000 intron (NM_003048, intron 1 of 11) L1PA8|LINE|L1 27198 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr12-8132 chr12 120397857 120398067 + 4.48 0.000 Intergenic CpG -28798 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chr2-11162 chr2 148598436 148598646 + 4.48 0.000 Intergenic AluSc8|SINE|Alu -46210 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr7-9580 chr7 147140563 147140773 + 4.48 0.000 intron (NM_014141, intron 7 of 22) intron (NM_014141, intron 7 of 22) -43059 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr5-4110 chr5 74421375 74421585 + 4.48 0.000 intron (NR_126354, intron 2 of 2) intron (NR_126354, intron 2 of 2) 98994 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chr7-6550 chr7 49510490 49510700 + 4.48 0.000 Intergenic L1M4|LINE|L1 -263043 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr7-7717 chr7 426160 426370 + 4.48 0.000 Intergenic Intergenic 46840 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr17-6877 chr17 29657888 29658098 + 4.48 0.000 intron (NM_033389, intron 10 of 14) L1MC4|LINE|L1 -36570 NM_032854 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding chr9-4680 chr9 123871696 123871906 + 4.48 0.000 intron (NM_001352968, intron 2 of 18) intron (NM_001352968, intron 2 of 18) 58325 NM_001352968 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr5-5347 chr5 131315394 131315604 + 4.48 0.000 intron (NM_001038702, intron 1 of 4) MER102b|DNA|hAT-Charlie 51490 NM_020240 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding chr14-2057 chr14 65755357 65755567 + 4.48 0.000 Intergenic Intergenic 284360 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr1-10482 chr1 164019025 164019235 + 4.48 0.000 Intergenic L1M3e|LINE|L1 -540230 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr2-10646 chr2 16816510 16816720 + 4.48 0.000 Intergenic L2|LINE|L2 -150781 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr4-5752 chr4 59484612 59484822 + 4.48 0.000 Intergenic L1M4|LINE|L1 471144 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr4-8569 chr4 167457150 167457360 + 4.48 0.000 Intergenic Intergenic -222665 NM_001251967 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr19-5160 chr19 4623233 4623443 + 4.48 0.000 Intergenic L2c|LINE|L2 -16178 NM_152362 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr2-10248 chr2 116678247 116678457 + 4.48 0.000 Intergenic Intergenic -1136339 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr12-7647 chr12 82449291 82449501 + 4.48 0.000 intron (NM_001347934, intron 9 of 12) intron (NM_001347934, intron 9 of 12) -90591 NR_033192 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr9-8156 chr9 104050575 104050785 + 4.48 0.000 Intergenic Intergenic 41794 NR_121580 101928550 Hs.144722 NR_121580 ENSG00000270332 SMC2-AS1 - SMC2 antisense RNA 1 (head to head) ncRNA chrX-5096 chrX 127663053 127663263 + 4.48 0.000 Intergenic LTR12C|LTR|ERV1 389245 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr2-9879 chr2 206443563 206443773 + 4.48 0.000 5' UTR (NM_003812, exon 1 of 26) 5' UTR (NM_003812, exon 1 of 26) 136 NM_003812 8745 Hs.370287 NM_003812 ENSG00000114948 ADAM23 MDC-3|MDC3 ADAM metallopeptidase domain 23 protein-coding chr7-9251 chr7 122353827 122354037 + 4.48 0.000 intron (NM_001167940, intron 27 of 29) L3|LINE|CR1 -49182 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chrX-2318 chrX 55402386 55402596 + 4.48 0.000 Intergenic L1PA5|LINE|L1 -49004 NR_130469 100847061 NR_130469 ENSG00000266328 MIR4536-2 - microRNA 4536-2 ncRNA chr3-10584 chr3 142568909 142569119 + 4.48 0.000 intron (NM_001354579, intron 1 of 45) MER52D|LTR|ERV1 9719 NM_001354579 545 Hs.271791 NM_001184 ENSG00000175054 ATR FCTCS|FRP1|MEC1|SCKL|SCKL1 ATR serine/threonine kinase protein-coding chr11-3872 chr11 82747305 82747515 + 4.48 0.000 Intergenic AluSz|SINE|Alu -13546 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr10-6398 chr10 5396753 5396963 + 4.48 0.000 intron (NM_024803, intron 2 of 3) MIR|SINE|MIR 7970 NM_024803 79861 Hs.163079 NM_024803 ENSG00000178462 TUBAL3 - tubulin alpha like 3 protein-coding chr19-5284 chr19 281520 281730 + 4.48 0.000 intron (NM_003712, intron 5 of 5) intron (NM_003712, intron 5 of 5) 9514 NM_177543 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr4-4633 chr4 80509255 80509465 + 4.48 0.000 intron (NM_152770, intron 2 of 5) intron (NM_152770, intron 2 of 5) 173640 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr4-8477 chr4 158762600 158762810 + 4.48 0.000 Intergenic L2c|LINE|L2 -6321 NM_020840 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr11-9277 chr11 44755131 44755341 + 4.48 0.000 intron (NM_130783, intron 1 of 9) intron (NM_130783, intron 1 of 9) 28274 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr15-4555 chr15 57343760 57343970 + 4.48 0.000 Intergenic Intergenic 24727 NR_120337 101928611 Hs.569495 NR_120337 LINC01413 - long intergenic non-protein coding RNA 1413 ncRNA chr11-7872 chr11 121547242 121547452 + 4.48 0.000 intron (NM_003105, intron 14 of 47) MamTip1|DNA|hAT-Tip100 95033 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr5-7659 chr5 53397829 53398039 + 4.48 0.000 Intergenic L1MA3|LINE|L1 -82695 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr6-8330 chr6 146523554 146523764 + 4.48 0.000 Intergenic AluSc|SINE|Alu -20174 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr18-3055 chr18 30043130 30043340 + 4.48 0.000 Intergenic AluSp|SINE|Alu -255675 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr9-7501 chr9 32109968 32110178 + 4.48 0.000 Intergenic Intergenic -274530 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr8-6011 chr8 22940991 22941201 + 4.48 0.000 promoter-TSS (NM_001363233) promoter-TSS (NM_001363233) -19 NM_001363233 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr5-8512 chr5 133863665 133863875 + 4.48 0.000 Intergenic Intergenic -49907 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr2-6850 chr2 72030855 72031065 + 4.48 0.000 Intergenic Intergenic 116902 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr8-3263 chr8 5122868 5123078 + 4.48 0.000 Intergenic CpG -128059 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr1-11746 chr1 17664112 17664322 + 4.48 0.000 intron (NR_137287, intron 26 of 29) GA-rich|Low_complexity|Low_complexity 45904 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr3-10860 chr3 168002991 168003201 + 4.48 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 92828 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr10-7057 chr10 85494384 85494594 + 4.48 0.000 Intergenic L2a|LINE|L2 44897 NR_120671 101929684 Hs.554059 NR_120671 ENSG00000230962 LINC01520 - long intergenic non-protein coding RNA 1520 ncRNA chr11-8470 chr11 117497079 117497289 + 4.48 0.000 intron (NM_020693, intron 11 of 32) intron (NM_020693, intron 11 of 32) 169330 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr13-4143 chr13 84025820 84026030 + 4.48 0.000 Intergenic Intergenic -114677 NR_046871 100874128 Hs.578060 NR_046871 LINC00333 NCRNA00333 long intergenic non-protein coding RNA 333 ncRNA chr1-10270 chr1 145280760 145280970 + 4.48 0.000 promoter-TSS (NR_104075) promoter-TSS (NR_104075) -251 NR_104075 101954266 NR_104075 ENSG00000207501 RNVU1-14 RNU1-37|vU1.14 RNA, variant U1 small nuclear 14 snRNA chr15-4321 chr15 40069094 40069304 + 4.48 0.000 Intergenic Intergenic 29888 NR_040062 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr7-9678 chr7 152878101 152878311 + 4.48 0.000 Intergenic AluJr|SINE|Alu 118454 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr13-4186 chr13 90031686 90031896 + 4.48 0.000 Intergenic L1MB1|LINE|L1 87926 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA chr6-6837 chr6 7696440 7696650 + 4.48 0.000 Intergenic Intergenic -29554 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr21-1899 chr21 44382335 44382545 + 4.48 0.000 intron (NM_003307, intron 8 of 31) intron (NM_003307, intron 8 of 31) 28839 NM_001320351 7226 Hs.369759 NM_003307 ENSG00000142185 TRPM2 EREG1|KNP3|LTRPC2|LTrpC-2|NUDT9H|NUDT9L1|TRPC7 transient receptor potential cation channel subfamily M member 2 protein-coding chr12-4418 chr12 7590175 7590385 + 4.48 0.000 Intergenic SVA_D|Retroposon|SVA 75628 NM_001644 339 Hs.560 NM_001644 ENSG00000111701 APOBEC1 APOBEC-1|BEDP|CDAR1|HEPR apolipoprotein B mRNA editing enzyme catalytic subunit 1 protein-coding chr5-5936 chr5 74819901 74820111 + 4.48 0.000 intron (NR_046462, intron 4 of 11) AluSx|SINE|Alu -45887 NR_134288 441086 Hs.653007 NR_134288 LOC441086 - uncharacterized LOC441086 ncRNA chrX-3180 chrX 39636105 39636315 + 4.48 0.000 Intergenic Intergenic -25006 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr17-7469 chr17 15054261 15054471 + 4.48 0.000 Intergenic Zaphod3|DNA|hAT-Tip100 23391 NR_033371 94150 Hs.147654 NR_033371 ENSG00000259944 CDRT7 LINC00025|NCRNA00025 CMT1A duplicated region transcript 7 ncRNA chr1-14521 chr1 51288968 51289178 + 4.48 0.000 intron (NM_001080494, intron 16 of 17) intron (NM_001080494, intron 16 of 17) 8888 NM_001297667 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr1-14459 chr1 47228720 47228930 + 4.48 0.000 intron (NM_001290403, intron 2 of 4) intron (NM_001290403, intron 2 of 4) 2890 NM_001287347 6886 Hs.705618 NM_003189 ENSG00000162367 TAL1 SCL|TCL5|bHLHa17|tal-1 TAL bHLH transcription factor 1, erythroid differentiation factor protein-coding chr10-7493 chr10 11864786 11864996 + 4.48 0.000 intron (NR_038222, intron 3 of 5) HAL1|LINE|L1 29819 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr4-7845 chr4 101987110 101987320 + 4.48 0.000 intron (NM_017935, intron 7 of 16) intron (NM_017935, intron 7 of 16) 173373 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr13-1878 chr13 30592761 30592971 + 4.48 0.000 intron (NM_001370340, intron 1 of 4) intron (NM_001370340, intron 1 of 4) 24721 NM_001370340 3146 Hs.434102 NM_002128 ENSG00000189403 HMGB1 HMG-1|HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding chr15-3798 chr15 70646119 70646329 + 4.48 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 10975 NR_126482 104548973 NR_126482 ENSG00000280515 SALRNA2 SAL-RNA2|XLOC_025931 senescence associated long non-coding RNA 2 ncRNA chr6-3747 chr6 8983144 8983354 + 4.48 0.000 Intergenic Intergenic 331040 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr1-15588 chr1 160395580 160395790 + 4.48 0.000 Intergenic L2c|LINE|L2 -4879 NM_020335 57216 Hs.99477 NM_020335 ENSG00000162738 VANGL2 LPP1|LTAP|STB1|STBM|STBM1 VANGL planar cell polarity protein 2 protein-coding chr5-8833 chr5 150918790 150919000 + 4.48 0.000 Intergenic Intergenic -13912 NM_001172831 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding chr9-5287 chr9 83611918 83612128 + 4.48 0.000 Intergenic L1ME3D|LINE|L1 -11026 NM_001256915 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding chr10-5579 chr10 90602794 90603004 + 4.48 0.000 Intergenic Intergenic -62094 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr4-6142 chr4 29654946 29655156 + 4.48 0.000 Intergenic Intergenic 440759 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr17-2814 chr17 12778701 12778911 + 4.48 0.000 intron (NR_104607, intron 1 of 1) AluJb|SINE|Alu -10692 NM_001321164 9912 Hs.499758 NM_014859 ENSG00000006740 ARHGAP44 NPC-A-10|RICH2 Rho GTPase activating protein 44 protein-coding chr10-6833 chr10 22008242 22008452 + 4.48 0.000 Intergenic AluSz6|SINE|Alu -4617 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding chr4-7644 chr4 84181394 84181604 + 4.48 0.000 intron (NR_125909, intron 5 of 8) MLT1G|LTR|ERVL-MaLR 117670 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr14-4941 chr14 74311967 74312177 + 4.48 0.000 Intergenic L1ME4b|LINE|L1 -9138 NM_001353596 5826 Hs.94395 NM_005050 ENSG00000119688 ABCD4 ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L ATP binding cassette subfamily D member 4 protein-coding chr19-4506 chr19 6553073 6553283 + 4.48 0.000 Intergenic L1PA13|LINE|L1 22152 NM_003811 8744 Hs.1524 NM_003811 ENSG00000125657 TNFSF9 4-1BB-L|CD137L|TNLG5A TNF superfamily member 9 protein-coding chr16-2558 chr16 64752254 64752464 + 4.48 0.000 Intergenic AluSx|SINE|Alu 369704 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr21-852 chr21 29944722 29944932 + 4.48 0.000 Intergenic Intergenic -4775 NM_001320630 2897 Hs.664641 NM_000830 ENSG00000171189 GRIK1 EAA3|EEA3|GLR5|GLUR5|GluK1|gluR-5 glutamate ionotropic receptor kainate type subunit 1 protein-coding chr10-3457 chr10 55322993 55323203 + 4.48 0.000 intron (NM_001354404, intron 2 of 34) THE1B-int|LTR|ERVL-MaLR -275944 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding chr7-7552 chr7 116441598 116441808 + 4.48 0.000 Intergenic Intergenic -58035 NM_198212 858 Hs.212332 NM_001233 ENSG00000105971 CAV2 CAV caveolin 2 protein-coding chr10-8720 chr10 102899018 102899228 + 4.48 0.000 non-coding (NR_160733, exon 3 of 3) non-coding (NR_160733, exon 3 of 3) -19171 NM_199076 54805 Hs.643509 NM_017649 ENSG00000148842 CNNM2 ACDP2|HOMG6|HOMGSMR cyclin and CBS domain divalent metal cation transport mediator 2 protein-coding chr19-2981 chr19 21865658 21865868 + 4.48 0.000 Intergenic SVA_F|Retroposon|SVA -13695 NM_001256653 7594 Hs.534365 NM_003423 ENSG00000198521 ZNF43 HTF6|KOX27|ZNF39L1 zinc finger protein 43 protein-coding chrX-5252 chrX 137998331 137998541 + 4.48 0.000 Intergenic Intergenic 432309 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr4-6943 chr4 17646927 17647137 + 4.48 0.000 intron (NM_015688, intron 12 of 17) intron (NM_015688, intron 12 of 17) 32391 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chr22-4105 chr22 43643966 43644176 + 4.48 0.000 intron (NM_198856, intron 15 of 29) AluSx1|SINE|Alu 127817 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr4-8313 chr4 144763228 144763438 + 4.48 0.000 Intergenic L1PA15|LINE|L1 117177 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr5-8518 chr5 134023468 134023678 + 4.48 0.000 Intergenic Intergenic -18598 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr8-6173 chr8 32814065 32814275 + 4.48 0.000 Intergenic Intergenic 92335 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr5-8298 chr5 114485345 114485555 + 4.48 0.000 intron (NR_130785, intron 6 of 12) intron (NR_130785, intron 6 of 12) 51939 NM_170775 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr6-6521 chr6 126996122 126996332 + 4.48 0.000 Intergenic Intergenic -122444 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr4-3704 chr4 58203200 58203410 + 4.48 0.000 Intergenic Intergenic 333023 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr12-6889 chr12 22211009 22211219 + 4.48 0.000 intron (NM_003034, intron 4 of 4) MER57B2|LTR|ERV1 123600 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr5-3811 chr5 92527699 92527909 + 4.48 0.000 Intergenic (GGGT)n|Simple_repeat|Simple_repeat 1043539 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr11-9102 chr11 32295889 32296099 + 4.48 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 104406 NM_001367854 7490 Hs.591980 NM_000378 ENSG00000184937 WT1 AWT1|GUD|NPHS4|WAGR|WIT-2|WT33 WT1 transcription factor protein-coding chrX-5116 chrX 128743292 128743502 + 4.48 0.000 Intergenic Intergenic -690994 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr12-6326 chr12 54598260 54598470 + 4.48 0.000 Intergenic Intergenic -9706 NM_006741 5502 Hs.505662 NM_006741 ENSG00000135447 PPP1R1A I1|IPP1 protein phosphatase 1 regulatory inhibitor subunit 1A protein-coding chr3-9491 chr3 50518820 50519030 + 4.48 0.000 Intergenic Intergenic -14681 NM_001291101 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr3-10831 chr3 164300019 164300229 + 4.48 0.000 Intergenic MLT2A1|LTR|ERVL -128568 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr7-9588 chr7 147632379 147632589 + 4.48 0.000 intron (NM_014141, intron 11 of 22) THE1C|LTR|ERVL-MaLR -39195 NR_133929 105375556 Hs.667432 NR_133929 ENSG00000230190 LOC105375556 - uncharacterized LOC105375556 ncRNA chr1-12091 chr1 155433940 155434150 + 4.48 0.000 non-coding (NR_034180, exon 1 of 1) non-coding (NR_034180, exon 1 of 1) 865 NR_034180 645682 Hs.632482 NR_034180 ENSG00000237872 POU5F1P4 OCT3|OCT4|OTF-3|OTF3|Oct-3|Oct-4|Oct4-pg4|POU5F1|POU5FLC1 POU class 5 homeobox 1 pseudogene 4 pseudo chr16-6602 chr16 67331027 67331237 + 4.48 0.000 intron (NM_018296, intron 1 of 13) MSTD|LTR|ERVL-MaLR 4317 NM_018296 55282 Hs.125139 NM_018296 ENSG00000159708 LRRC36 RORBP70|XLHSRF2 leucine rich repeat containing 36 protein-coding chr5-6179 chr5 58599307 58599517 + 4.48 0.000 intron (NM_138453, intron 1 of 4) intron (NM_138453, intron 1 of 4) 16337 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr4-4711 chr4 88600219 88600429 + 4.48 0.000 intron (NM_001271602, intron 2 of 24) Tigger17|DNA|TcMar-Tigger 7844 NM_001318505 8916 Hs.35804 NM_014606 ENSG00000138641 HERC3 - HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein-coding chr17-8007 chr17 49745200 49745410 + 4.48 0.000 intron (NM_030802, intron 1 of 7) Tigger19b|DNA|TcMar-Tigger 18826 NM_030802 81558 Hs.514308 NM_030802 ENSG00000121104 FAM117A - family with sequence similarity 117 member A protein-coding chr11-10523 chr11 119688792 119689002 + 4.48 0.000 intron (NM_203285, intron 1 of 7) intron (NM_203285, intron 1 of 7) 40303 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr9-5328 chr9 87758429 87758639 + 4.48 0.000 Intergenic SVA_D|Retroposon|SVA -14381 NR_027917 392360 Hs.690450 NM_001023564 ENSG00000188029 CTSL3P CTSL3|HCTSL-s cathepsin L family member 3, pseudogene pseudo chr3-4833 chr3 142709707 142709917 + 4.48 0.000 intron (NM_001145319, intron 14 of 15) AluYm1|SINE|Alu -14222 NM_001251845 7220 Hs.250687 NM_003304 ENSG00000144935 TRPC1 HTRP-1|TRP1 transient receptor potential cation channel subfamily C member 1 protein-coding chr1-7786 chr1 45188781 45188991 + 4.48 0.000 intron (NM_020883, intron 1 of 13) intron (NM_020883, intron 1 of 13) 17719 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr1-15266 chr1 114282946 114283156 + 4.48 0.000 Intergenic Intergenic -129182 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr3-2780 chr3 185224402 185224612 + 4.48 0.000 intron (NM_001966, intron 4 of 6) AluSz|SINE|Alu 28765 NR_106712 100847054 NR_106712 ENSG00000264614 MIR5588 - microRNA 5588 ncRNA chr3-9259 chr3 39601445 39601655 + 4.48 0.000 Intergenic Intergenic 99484 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr12-7061 chr12 41236420 41236630 + 4.48 0.000 intron (NM_001164595, intron 3 of 9) L2|LINE|L2 48205 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr22-3308 chr22 18949089 18949299 + 4.48 0.000 Intergenic AluY|SINE|Alu -12641 NM_001368249 102724788 Hs.517352 NM_001368249 ENSG00000277196 LOC102724788 - proline dehydrogenase 1, mitochondrial protein-coding chr17-7478 chr17 15429792 15430002 + 4.48 0.000 Intergenic Intergenic 37724 NM_001204477 284040 Hs.164595 NM_173622 ENSG00000239704 CDRT4 - CMT1A duplicated region transcript 4 protein-coding chr1-13311 chr1 236523734 236523944 + 4.48 0.000 promoter-TSS (NM_201544) promoter-TSS (NM_201544) -143 NM_201544 3964 Hs.4082 NM_006499 ENSG00000116977 LGALS8 Gal-8|PCTA-1|PCTA1|Po66-CBP galectin 8 protein-coding chr3-8324 chr3 66556367 66556577 + 4.48 0.000 Intergenic MIRb|SINE|MIR -56051 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr3-10461 chr3 133704031 133704241 + 4.48 0.000 intron (NM_001354703, intron 3 of 22) intron (NM_001354703, intron 3 of 22) 42138 NM_001354703 7018 Hs.518267 NM_001063 ENSG00000091513 TF HEL-S-71p|PRO1557|PRO2086|TFQTL1 transferrin protein-coding chr19-4585 chr19 11567097 11567307 + 4.48 0.000 Intergenic AluSx|SINE|Alu -7966 NM_032377 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding chr16-6342 chr16 50108780 50108990 + 4.48 0.000 Intergenic AluY|SINE|Alu 42915 NM_001329729 55027 Hs.733027 NM_017939 ENSG00000155393 HEATR3 SYO1 HEAT repeat containing 3 protein-coding chr5-7716 chr5 58620281 58620491 + 4.48 0.000 intron (NM_138453, intron 2 of 4) (ATACTGT)n|Simple_repeat|Simple_repeat 37311 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr1-14497 chr1 49523094 49523304 + 4.48 0.000 intron (NR_136623, intron 2 of 12) intron (NR_136623, intron 2 of 12) -51114 NR_046839 100874313 Hs.551277 NR_046839 ENSG00000225623 AGBL4-IT1 - AGBL4 intronic transcript 1 ncRNA chr10-8525 chr10 92009425 92009635 + 4.48 0.000 intron (NM_003972, intron 28 of 37) intron (NM_003972, intron 28 of 37) 85760 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chr3-8251 chr3 50017498 50017708 + 4.48 0.000 intron (NM_001349194, intron 3 of 17) L1M3|LINE|L1 -71316 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr10-7950 chr10 54092182 54092392 + 4.48 0.000 intron (NM_001354411, intron 16 of 34) L2|LINE|L2 -393943 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr13-2066 chr13 56187459 56187669 + 4.48 0.000 Intergenic LTR12D|LTR|ERV1 -953354 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr3-9186 chr3 35188157 35188367 + 4.48 0.000 intron (NR_110817, intron 2 of 3) MER20|DNA|hAT-Charlie 205761 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chr2-14637 chr2 235135976 235136186 + 4.36 0.000 Intergenic Intergenic 108346 NM_001371306 chr1-12800 chr1 84203606 84203816 + 4.36 0.000 intron (NM_182948, intron 8 of 9) intron (NM_182948, intron 8 of 9) 22079 NM_001242862 5567 Hs.487325 NM_002731 ENSG00000142875 PRKACB PKA C-beta|PKACB protein kinase cAMP-activated catalytic subunit beta protein-coding chr10-6933 chr10 52616350 52616560 + 4.36 0.000 intron (NR_155748, intron 1 of 2) MLT1D|LTR|ERVL-MaLR 138949 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA chr8-6031 chr8 23483209 23483419 + 4.36 0.000 Intergenic Intergenic -25583 NM_001128930 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr11-5678 chr11 130945633 130945843 + 4.36 0.000 Intergenic L1MC1|LINE|L1 -29251 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr14-4939 chr14 74252240 74252450 + 4.36 0.000 intron (NM_182894, intron 3 of 4) intron (NM_182894, intron 3 of 4) 12896 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr16-6885 chr16 84331725 84331935 + 4.36 0.000 Intergenic Intergenic -36693 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr5-4620 chr5 32541514 32541724 + 4.36 0.000 Intergenic MER5A|DNA|hAT-Charlie -43938 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr1-15642 chr1 163438964 163439174 + 4.36 0.000 Intergenic MIRb|SINE|MIR -15878 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr11-9015 chr11 25341158 25341368 + 4.36 0.000 Intergenic AluSz|SINE|Alu 844210 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr19-6860 chr19 43818454 43818664 + 4.36 0.000 intron (NM_182573, intron 1 of 4) LTR16E2|LTR|ERVL 2097 NM_182573 284348 Hs.44289 NM_182573 ENSG00000159871 LYPD5 PRO4356 LY6/PLAUR domain containing 5 protein-coding chr6-7873 chr6 106979348 106979558 + 4.36 0.000 Intergenic Intergenic -2598 NM_001291738 100133941 Hs.644105 NM_013230 ENSG00000272398 CD24 CD24A CD24 molecule protein-coding chr18-1746 chr18 7161739 7161949 + 4.36 0.000 Intergenic Intergenic -44047 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr16-5307 chr16 70320259 70320469 + 4.36 0.000 intron (NM_007242, intron 5 of 11) AluJr|SINE|Alu 21311 NM_007242 11269 Hs.221761 NM_007242 ENSG00000157349 DDX19B DBP5|DDX19|RNAh DEAD-box helicase 19B protein-coding chr7-4305 chr7 29305186 29305396 + 4.36 0.000 intron (NM_001293070, intron 2 of 13) intron (NM_001293070, intron 2 of 13) -96321 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr8-5652 chr8 111122830 111123040 + 4.36 0.000 intron (NR_125418, intron 1 of 3) intron (NR_125418, intron 1 of 3) -95502 NR_125417 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr4-7967 chr4 112402922 112403132 + 4.36 0.000 intron (NM_001102406, intron 4 of 15) (T)n|Simple_repeat|Simple_repeat 105658 NM_001102406 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr8-4199 chr8 83899944 83900154 + 4.36 0.000 Intergenic L1PA5|LINE|L1 -282738 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr3-5294 chr3 124366747 124366957 + 4.36 0.000 intron (NM_001024660, intron 10 of 59) SVA_F|Retroposon|SVA -7480 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chrX-2998 chrX 47381055 47381265 + 4.36 0.000 intron (NM_003446, intron 1 of 3) intron (NM_003446, intron 1 of 3) -7490 NR_003710 100124540 Hs.693443 NR_003710 ENSG00000221459 SNORA11C - small nucleolar RNA, H/ACA box 11C snoRNA chr4-7002 chr4 23739075 23739285 + 4.36 0.000 Intergenic Intergenic 142112 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr15-4001 chr15 56070458 56070668 + 4.36 0.000 Intergenic L1MC1|LINE|L1 -76951 NM_001329212 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr2-9914 chr2 233832763 233832973 + 4.36 0.000 intron (NM_001367507, intron 41 of 41) intron (NM_001367507, intron 41 of 41) 21667 NM_018410 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding chr14-3374 chr14 92686995 92687205 + 4.36 0.000 intron (NM_024832, intron 9 of 9) CpG 61527 NM_005606 5641 Hs.18069 NM_005606 ENSG00000100600 LGMN AEP|LGMN1|PRSC1 legumain protein-coding chr12-7434 chr12 61111382 61111592 + 4.36 0.000 Intergenic Intergenic 1081352 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr7-7558 chr7 117884591 117884801 + 4.36 0.000 Intergenic MER91C|DNA|hAT-Tip100 -11255 NM_001363351 83992 Hs.592285 NM_033427 ENSG00000077063 CTTNBP2 C7orf8|CORTBP2|Orf4 cortactin binding protein 2 protein-coding chr8-4874 chr8 62046120 62046330 + 4.36 0.000 Intergenic L1MC4a|LINE|L1 156386 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr12-7671 chr12 84974926 84975136 + 4.36 0.000 Intergenic MIR|SINE|MIR 61246 NM_001100917 144448 Hs.156962 NM_001100917 ENSG00000231738 TSPAN19 - tetraspanin 19 protein-coding chr2-10211 chr2 102027101 102027311 + 4.36 0.000 intron (NR_048564, intron 8 of 8) MER5A|DNA|hAT-Charlie 28245 NR_048564 7850 Hs.25333 NM_004633 ENSG00000115590 IL1R2 CD121b|CDw121b|IL-1R-2|IL-1RT-2|IL-1RT2|IL1R2c|IL1RB interleukin 1 receptor type 2 protein-coding chr2-9964 chr2 7707453 7707663 + 4.36 0.000 Intergenic Intergenic 192097 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr3-4546 chr3 132569348 132569558 + 4.36 0.000 intron (NR_132427, intron 15 of 17) L1MD1|LINE|L1 -27817 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr15-4215 chr15 26601351 26601561 + 4.36 0.000 intron (NM_001191320, intron 2 of 6) L1M3b|LINE|L1 27634 NR_103801 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding chr11-4772 chr11 119270258 119270468 + 4.36 0.000 intron (NM_005188, intron 2 of 15) AluSz|SINE|Alu 42649 NR_106814 102465453 NR_106814 ENSG00000284148 MIR6756 hsa-mir-6756 microRNA 6756 ncRNA chr4-6875 chr4 11662116 11662326 + 4.36 0.000 Intergenic (GTGA)n|Simple_repeat|Simple_repeat 107247 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr14-4613 chr14 52607497 52607707 + 4.36 0.000 intron (NM_001099652, intron 3 of 6) AluSz6|SINE|Alu 54766 NM_001099652 283554 Hs.416214 NM_001099652 ENSG00000180998 GPR137C TM7SF1L2 G protein-coupled receptor 137C protein-coding chr11-5675 chr11 130036075 130036285 + 4.36 0.000 Intergenic AluJb|SINE|Alu -33345 NM_001367890 56980 Hs.275086 NM_020228 ENSG00000170325 PRDM10 PFM7|TRIS PR/SET domain 10 protein-coding chr17-8144 chr17 59372126 59372336 + 4.36 0.000 intron (NM_001005404, intron 2 of 4) intron (NM_001005404, intron 2 of 4) 6148 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chr9-7218 chr9 737503 737713 + 4.36 0.000 intron (NR_148869, intron 6 of 10) intron (NR_148869, intron 6 of 10) 30931 NM_001354344 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chrX-4029 chrX 17494573 17494783 + 4.36 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -33757 NR_135631 101928389 Hs.686933 NR_135631 ENSG00000235834 LOC101928389 - uncharacterized LOC101928389 ncRNA chr10-7083 chr10 91420587 91420797 + 4.36 0.000 intron (NM_182765, intron 1 of 20) intron (NM_182765, intron 1 of 20) 10407 NR_104291 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr12-4267 chr12 119933394 119933604 + 4.36 0.000 Intergenic AluJo|SINE|Alu -55737 NM_001367886 92558 Hs.369763 NM_207311 ENSG00000135127 BICDL1 BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 BICD family like cargo adaptor 1 protein-coding chr2-14122 chr2 202051480 202051690 + 4.36 0.000 Intergenic Intergenic 16998 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr1-11548 chr1 171583752 171583962 + 4.36 0.000 intron (NM_015172, intron 28 of 33) Tigger3b|DNA|TcMar-Tigger -35906 NM_001368164 110806290 NM_001368164 MYOCOS - myocilin opposite strand protein-coding chr18-2585 chr18 12215875 12216085 + 4.36 0.000 intron (NR_049896, intron 3 of 4) intron (NR_049896, intron 3 of 4) 15201 NR_049896 497259 Hs.451609 NR_049896 C18orf61 - uncharacterized LOC497259 ncRNA chr14-3858 chr14 79782383 79782593 + 4.36 0.000 intron (NR_073547, intron 18 of 20) intron (NR_073547, intron 18 of 20) -428931 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA chr11-7503 chr11 4489310 4489520 + 4.36 0.000 exon (NM_001005171, exon 1 of 1) exon (NM_001005171, exon 1 of 1) 536 NM_001005171 390036 Hs.553726 NM_001005171 ENSG00000196778 OR52K1 OR11-8 olfactory receptor family 52 subfamily K member 1 protein-coding chr7-8651 chr7 71220297 71220507 + 4.36 0.000 intron (NM_022479, intron 1 of 10) MER101B|LTR|ERV1 -87272 NR_037479 100500920 NR_037479 ENSG00000283278 MIR3914-2 - microRNA 3914-2 ncRNA chr15-3539 chr15 101160393 101160603 + 4.36 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 91550 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr17-7615 chr17 27521552 27521762 + 4.36 0.000 intron (NM_014238, intron 2 of 20) AluJb|SINE|Alu 49693 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr8-6496 chr8 64673335 64673545 + 4.36 0.000 intron (NM_004820, intron 1 of 5) intron (NM_004820, intron 1 of 5) -91548 NR_152770 401463 Hs.651960 NR_015374 ENSG00000254102 LOC401463 - uncharacterized LOC401463 ncRNA chr4-5464 chr4 48651600 48651810 + 4.36 0.000 intron (NM_015030, intron 3 of 63) intron (NM_015030, intron 3 of 63) 128594 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chr2-11363 chr2 208837453 208837663 + 4.36 0.000 Intergenic L1PA4|LINE|L1 294916 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chr6-3378 chr6 42686588 42686798 + 4.36 0.000 intron (NM_015255, intron 44 of 46) SVA_B|Retroposon|SVA 35904 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr8-6118 chr8 28538300 28538510 + 4.36 0.000 intron (NM_017412, intron 5 of 7) MIRb|SINE|MIR -33223 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA chr5-9066 chr5 170974541 170974751 + 4.36 0.000 intron (NM_022897, intron 14 of 27) MLT1A0-int|LTR|ERVL-MaLR 112628 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chr6-8203 chr6 134721004 134721214 + 4.36 0.000 Intergenic Intergenic -181104 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr5-8449 chr5 129593764 129593974 + 4.36 0.000 intron (NM_133638, intron 7 of 22) intron (NM_133638, intron 7 of 22) -133180 NR_125748 103689846 Hs.628635 NR_125748 ENSG00000249421 ADAMTS19-AS1 - ADAMTS19 antisense RNA 1 ncRNA chr2-10212 chr2 102033497 102033707 + 4.36 0.000 Intergenic Intergenic 34641 NR_048564 7850 Hs.25333 NM_004633 ENSG00000115590 IL1R2 CD121b|CDw121b|IL-1R-2|IL-1RT-2|IL-1RT2|IL1R2c|IL1RB interleukin 1 receptor type 2 protein-coding chr8-5735 chr8 137566152 137566362 + 4.36 0.000 Intergenic Intergenic -152669 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr14-4175 chr14 81002130 81002340 + 4.36 0.000 intron (NM_001142626, intron 1 of 8) MER46C|DNA|TcMar-Tigger 46614 NM_001142626 7253 Hs.160411 NM_000369 ENSG00000165409 TSHR CHNG1|LGR3|hTSHR-I thyroid stimulating hormone receptor protein-coding chr14-4369 chr14 25551521 25551731 + 4.36 0.000 Intergenic Intergenic -501329 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr8-5235 chr8 125488922 125489132 + 4.36 0.000 Intergenic AluJb|SINE|Alu 56818 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr3-7577 chr3 6178313 6178523 + 4.36 0.000 Intergenic Intergenic 627031 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr7-6883 chr7 65456987 65457197 + 4.36 0.000 Intergenic L1MB1|LINE|L1 83237 NM_001287533 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr15-2563 chr15 52038043 52038253 + 4.36 0.000 intron (NM_002748, intron 1 of 5) intron (NM_002748, intron 1 of 5) 18929 NM_002748 5597 Hs.411847 NM_002748 ENSG00000069956 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding chr1-15193 chr1 109759530 109759740 + 4.36 0.000 intron (NM_133181, intron 4 of 18) intron (NM_133181, intron 4 of 18) 4288 NM_133181 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr1-14312 chr1 39499393 39499603 + 4.36 0.000 intron (NM_181809, intron 1 of 6) intron (NM_181809, intron 1 of 6) 7862 NM_181809 353500 Hs.472497 NM_181809 ENSG00000183682 BMP8A - bone morphogenetic protein 8a protein-coding chr12-7934 chr12 108877724 108877934 + 4.36 0.000 Intergenic AluSx|SINE|Alu -2263 NM_001917 1610 Hs.113227 NM_001917 ENSG00000110887 DAO DAAO|DAMOX|OXDA D-amino acid oxidase protein-coding chr1-13612 chr1 9494742 9494952 + 4.36 0.000 Intergenic Intergenic -44618 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr2-13855 chr2 177699514 177699724 + 4.36 0.000 intron (NR_136171, intron 2 of 4) intron (NR_136171, intron 2 of 4) 26297 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA chr21-1628 chr21 21200603 21200813 + 4.36 0.000 intron (NM_001352597, intron 1 of 10) intron (NM_001352597, intron 1 of 10) 53546 NM_001352597 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding chr13-3851 chr13 49915775 49915985 + 4.36 0.000 intron (NM_020456, intron 4 of 4) L1ME1|LINE|L1 20460 NR_023351 57213 Hs.44235 NM_020456 ENSG00000123178 SPRYD7 C13orf1|CLLD6 SPRY domain containing 7 protein-coding chr21-1939 chr21 45634719 45634929 + 4.36 0.000 Intergenic Intergenic -8901 NM_001348239 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr13-4119 chr13 80891868 80892078 + 4.36 0.000 Intergenic Intergenic -126418 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA chr3-6125 chr3 54330083 54330293 + 4.36 0.000 intron (NM_018398, intron 3 of 37) intron (NM_018398, intron 3 of 37) 207636 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr11-5582 chr11 107611701 107611911 + 4.36 0.000 intron (NM_001308018, intron 1 of 12) L1PA16|LINE|L1 20659 NM_018712 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr10-7374 chr10 2456919 2457129 + 4.36 0.000 intron (NR_136146, intron 1 of 2) intron (NR_136146, intron 1 of 2) 44438 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr12-8033 chr12 113919645 113919855 + 4.36 0.000 intron (NM_001146698, intron 19 of 24) intron (NM_001146698, intron 19 of 24) 46575 NM_001146699 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr3-8951 chr3 14748933 14749143 + 4.36 0.000 intron (NM_001184957, intron 12 of 16) L1M4|LINE|L1 62376 NR_135245 152274 Hs.434128 NR_135245 ENSG00000260902 LINC02011 - long intergenic non-protein coding RNA 2011 ncRNA chr5-6460 chr5 170861672 170861882 + 4.36 0.000 promoter-TSS (NM_022897) promoter-TSS (NM_022897) -241 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chr19-4174 chr19 41124134 41124344 + 4.36 0.000 intron (NM_000774, intron 7 of 9) AluSz|SINE|Alu 9807 NR_135528 1572 Hs.558318 NM_000774 ENSG00000197446 CYP2F1 C2F1|CYP2F|CYPIIF1 cytochrome P450 family 2 subfamily F member 1 protein-coding chr6-8163 chr6 131803280 131803490 + 4.36 0.000 Intergenic MER83|LTR|ERV1 -4635 NM_006208 5167 Hs.527295 NM_006208 ENSG00000197594 ENPP1 ARHR2|COLED|M6S1|NPP1|NPPS|PC-1|PCA1|PDNP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding chr17-6233 chr17 19737213 19737423 + 4.36 0.000 TTS (NM_001135167) TTS (NM_001135167) 8141 NM_001135168 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr4-7713 chr4 89510580 89510790 + 4.36 0.000 Intergenic MSTB|LTR|ERVL-MaLR -202885 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr12-2951 chr12 102722672 102722882 + 4.36 0.000 Intergenic Intergenic 101622 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr8-3041 chr8 141518777 141518987 + 4.36 0.000 Intergenic CpG -11652 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr11-6286 chr11 60782088 60782298 + 4.36 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -3140 NM_206893 341116 Hs.591956 NM_206893 ENSG00000172689 MS4A10 CD20L7|MS4A9 membrane spanning 4-domains A10 protein-coding chr3-7473 chr3 139934602 139934812 + 4.36 0.000 promoter-TSS (NM_022131) promoter-TSS (NM_022131) -478 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr2-13733 chr2 168301327 168301537 + 4.36 0.000 Intergenic Intergenic -53837 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr20-3306 chr20 12227426 12227636 + 4.36 0.000 Intergenic MER5B|DNA|hAT-Charlie 309638 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr17-7324 chr17 5343536 5343746 + 4.36 0.000 intron (NM_001083585, intron 5 of 16) intron (NM_001083585, intron 5 of 16) 61357 NM_001291581 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr2-11155 chr2 145205195 145205405 + 4.36 0.000 Intergenic AluY|SINE|Alu 537333 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr8-5681 chr8 121223811 121224021 + 4.36 0.000 Intergenic Intergenic -411870 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr4-8329 chr4 145708444 145708654 + 4.36 0.000 intron (NM_001080531, intron 2 of 5) MER50-int|LTR|ERV1 28345 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chrX-2971 chrX 23643013 23643223 + 4.36 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -24375 NM_006406 10549 Hs.83383 NM_006406 ENSG00000123131 PRDX4 AOE37-2|AOE372|HEL-S-97n|PRX-4 peroxiredoxin 4 protein-coding chr18-1838 chr18 22963872 22964082 + 4.36 0.000 intron (NM_002894, intron 4 of 18) HAL1|LINE|L1 30101 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr1-7775 chr1 42165608 42165818 + 4.36 0.000 promoter-TSS (NM_033553) promoter-TSS (NM_033553) -968 NM_033553 2980 Hs.778 NM_033553 ENSG00000197273 GUCA2A GCAP-I|GUCA2|STARA guanylate cyclase activator 2A protein-coding chr11-9970 chr11 77237015 77237225 + 4.36 0.000 intron (NM_182833, intron 13 of 16) LTR80A|LTR|ERVL 64546 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr2-13305 chr2 129950458 129950668 + 4.36 0.000 Intergenic Charlie1b|DNA|hAT-Charlie -16246 NR_026740 389033 Hs.380682 NR_026740 ENSG00000214100 PLAC9P1 - placenta associated 9 pseudogene 1 pseudo chr17-6253 chr17 28630268 28630478 + 4.36 0.000 intron (NM_001363826, intron 22 of 37) AluJb|SINE|Alu 14785 NM_014680 9703 Hs.151761 NM_014680 ENSG00000007202 KIAA0100 BCOX|BCOX1|CT101|FMP27 KIAA0100 protein-coding chr1-16240 chr1 209876206 209876416 + 4.36 0.000 Intergenic MIRb|SINE|MIR 48339 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 UTP25 C1orf107|DEF|DIEXF|DJ434O14.5 UTP25 small subunit processor component protein-coding chr9-4340 chr9 128432208 128432418 + 4.36 0.000 intron (NM_001286760, intron 9 of 12) AluSx|SINE|Alu 11456 NM_016174 51148 Hs.495230 NM_016174 ENSG00000167123 CERCAM CEECAM1|GLT25D3 cerebral endothelial cell adhesion molecule protein-coding chr1-12120 chr1 164823573 164823783 + 4.36 0.000 intron (NM_001353131, intron 7 of 7) intron (NM_001353131, intron 7 of 7) -49037 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr12-6557 chr12 119073053 119073263 + 4.36 0.000 intron (NM_194286, intron 1 of 12) intron (NM_194286, intron 1 of 12) 91617 NM_194286 84530 Hs.744964 NM_194286 ENSG00000139767 SRRM4 KIAA1853|MU-MB-2.76|nSR100 serine/arginine repetitive matrix 4 protein-coding chr20-2924 chr20 64278078 64278288 + 4.36 0.000 Intergenic Intergenic -12202 NR_040415 140849 Hs.745565 NR_040415 LINC00266-1 C20orf69|NCRNA00266|NCRNA00266-1|bA476I15.3 long intergenic non-protein coding RNA 266-1 ncRNA chr13-3520 chr13 22302867 22303077 + 4.36 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 92687 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA chr15-3791 chr15 69185538 69185748 + 4.36 0.000 intron (NM_001324093, intron 2 of 5) MER21A|LTR|ERVL 25008 NM_001324094 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr15-3692 chr15 41184450 41184660 + 4.36 0.000 exon (NM_001286441, exon 12 of 12) exon (NM_001286441, exon 12 of 12) 46202 NM_001286441 161829 Hs.307999 NM_152596 ENSG00000178997 EXD1 EXDL1 exonuclease 3'-5' domain containing 1 protein-coding chr1-11273 chr1 5099831 5100041 + 4.36 0.000 Intergenic Intergenic 445327 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr9-4484 chr9 35317439 35317649 + 4.36 0.000 intron (NM_006377, intron 10 of 38) AluSz6|SINE|Alu -24352 NM_001371187 chr17-7567 chr17 19873871 19874081 + 4.36 0.000 Intergenic AluSz|SINE|Alu -6040 NM_014683 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr20-3933 chr20 33098058 33098268 + 4.36 0.000 intron (NM_182519, intron 11 of 15) MIRb|SINE|MIR 16651 NM_182519 149954 Hs.38961 NM_182519 ENSG00000186191 BPIFB4 C20orf186|LPLUNC4|RY2G5|dJ726C3.5 BPI fold containing family B member 4 protein-coding chr19-4974 chr19 45702742 45702952 + 4.36 0.000 intron (NM_017659, intron 6 of 6) intron (NM_017659, intron 6 of 6) 10181 NM_001163377 54814 Hs.631556 NM_017659 ENSG00000011478 QPCTL gQC glutaminyl-peptide cyclotransferase like protein-coding chr6-6388 chr6 75987545 75987755 + 4.36 0.000 intron (NM_001563, intron 12 of 16) AluY|SINE|Alu 85012 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding chr2-10049 chr2 36132642 36132852 + 4.36 0.000 Intergenic Intergenic 222823 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr22-1781 chr22 29437808 29438018 + 4.36 0.000 promoter-TSS (NM_021026) promoter-TSS (NM_021026) -670 NM_021026 5988 Hs.648249 NM_021026 ENSG00000128250 RFPL1 RNF78 ret finger protein like 1 protein-coding chr16-4417 chr16 51525033 51525243 + 4.36 0.000 Intergenic Intergenic -237381 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr12-7021 chr12 33022761 33022971 + 4.36 0.000 Intergenic SVA_C|Retroposon|SVA -126020 NM_001005242 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr14-5215 chr14 96162262 96162472 + 4.36 0.000 Intergenic Intergenic -42431 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chrX-3093 chrX 137819124 137819334 + 4.36 0.000 Intergenic AluSg|SINE|Alu 253102 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr11-7279 chr11 33888314 33888524 + 4.36 0.000 intron (NM_005574, intron 1 of 5) L2a|LINE|L2 3657 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr14-2548 chr14 25002193 25002403 + 4.36 0.000 intron (NM_001351940, intron 1 of 6) intron (NM_001351940, intron 1 of 6) 46702 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr16-5576 chr16 47259853 47260063 + 4.36 0.000 intron (NM_030790, intron 11 of 17) AluY|SINE|Alu 115890 NR_110903 101927102 Hs.634652 NR_110903 ITFG1-AS1 - ITFG1 antisense RNA 1 ncRNA chr2-5956 chr2 40983433 40983643 + 4.36 0.000 Intergenic Intergenic -471103 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr6-5280 chr6 139136012 139136222 + 4.36 0.000 intron (NM_016217, intron 1 of 3) intron (NM_016217, intron 1 of 3) 1037 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding chr20-3351 chr20 31611250 31611460 + 4.36 0.000 Intergenic Intergenic 4169 NR_036161 100422904 NR_036161 ENSG00000264395 MIR3193 - microRNA 3193 ncRNA chr12-4368 chr12 4083961 4084171 + 4.36 0.000 Intergenic Intergenic -189696 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chrX-3186 chrX 40808865 40809075 + 4.36 0.000 Intergenic Intergenic 24226 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo chr12-7821 chr12 99669550 99669760 + 4.36 0.000 intron (NM_152788, intron 8 of 25) L1ME1|LINE|L1 21902 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr20-2793 chr20 56248680 56248890 + 4.36 0.000 promoter-TSS (NM_019888) promoter-TSS (NM_019888) 53 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr20-3605 chr20 5294609 5294819 + 4.36 0.000 Intergenic LTR81B|LTR|Gypsy 22018 NM_144773 128674 Hs.375029 NM_144773 ENSG00000101292 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding chr8-2518 chr8 22148124 22148334 + 4.36 0.000 exon (NM_139278, exon 8 of 8) exon (NM_139278, exon 8 of 8) -6322 NM_025232 80346 Hs.289063 NM_025232 ENSG00000168476 REEP4 C8orf20|PP432|Yip2c receptor accessory protein 4 protein-coding chr7-8175 chr7 30391059 30391269 + 4.36 0.000 intron (NR_108081, intron 1 of 2) intron (NR_108081, intron 1 of 2) 279 NR_108081 100506516 NR_108081 ENSG00000281404 LINC01176 - long intergenic non-protein coding RNA 1176 ncRNA KQ759762.1-1 KQ759762.1 33350 33560 + 4.36 0.000 NA NA NA NA chr8-7555 chr8 144806190 144806400 + 4.36 0.000 intron (NR_134285, intron 3 of 3) intron (NR_134285, intron 3 of 3) 7419 NM_213605 340385 Hs.521942 NM_213605 ENSG00000197363 ZNF517 - zinc finger protein 517 protein-coding chr16-5982 chr16 5044197 5044407 + 4.36 0.000 3' UTR (NM_152459, exon 8 of 8) 3' UTR (NM_152459, exon 8 of 8) -10367 NM_016256 51172 Hs.21334 NM_016256 ENSG00000103174 NAGPA APAA|UCE N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein-coding chr8-3831 chr8 30095373 30095583 + 4.36 0.000 promoter-TSS (NM_001128208) promoter-TSS (NM_001128208) 70 NM_001128208 23484 Hs.146585 NM_015344 ENSG00000104660 LEPROTL1 HSPC112|Vps55|my047 leptin receptor overlapping transcript like 1 protein-coding chr4-8542 chr4 164931382 164931592 + 4.36 0.000 Intergenic MER1B|DNA|hAT-Charlie -25461 NR_160935 152756 Hs.178648 NM_153027 ENSG00000250486 FAM218A C4orf39 family with sequence similarity 218 member A ncRNA chr2-12114 chr2 35250028 35250238 + 4.36 0.000 Intergenic Intergenic -221272 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr12-4401 chr12 6363305 6363515 + 4.36 0.000 intron (NM_001038, intron 3 of 12) CpG -11750 NM_001270987 4055 Hs.1116 NM_002342 ENSG00000111321 LTBR D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3 lymphotoxin beta receptor protein-coding chr3-8156 chr3 32384803 32385013 + 4.36 0.000 Intergenic Intergenic -6945 NM_138410 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr1-15559 chr1 158843925 158844135 + 4.36 0.000 exon (NM_002432, exon 4 of 7) exon (NM_002432, exon 4 of 7) 12679 NM_002432 4332 Hs.153837 NM_002432 ENSG00000163563 MNDA PYHIN3 myeloid cell nuclear differentiation antigen protein-coding chr4-8700 chr4 181802674 181802884 + 4.36 0.000 Intergenic Intergenic 27194 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr8-6510 chr8 65935659 65935869 + 4.36 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -79214 NM_001349432 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr19-4054 chr19 7669056 7669266 + 4.36 0.000 intron (NM_001193374, intron 1 of 3) intron (NM_001193374, intron 1 of 3) 112 NM_020415 56729 Hs.283091 NM_020415 ENSG00000104918 RETN ADSF|FIZZ3|RETN1|RSTN|XCP1 resistin protein-coding chr16-6802 chr16 79513028 79513238 + 4.36 0.000 Intergenic Intergenic 87604 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr10-7984 chr10 59996959 59997169 + 4.36 0.000 Intergenic Intergenic -36151 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr8-5434 chr8 35907456 35907666 + 4.36 0.000 Intergenic L1MB8|LINE|L1 -197241 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr3-8132 chr3 26459765 26459975 + 4.36 0.000 Intergenic AluSc8|SINE|Alu -162936 NM_052953 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr5-4697 chr5 39844073 39844283 + 4.36 0.000 Intergenic L1MA5A|LINE|L1 -208113 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr9-3101 chr9 37352324 37352534 + 4.36 0.000 intron (NR_110317, intron 6 of 7) intron (NR_110317, intron 6 of 7) -70267 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr5-5938 chr5 76215695 76215905 + 4.36 0.000 intron (NM_014979, intron 4 of 12) intron (NM_014979, intron 4 of 12) 132417 NM_014979 22987 Hs.646953 NM_014979 ENSG00000122012 SV2C - synaptic vesicle glycoprotein 2C protein-coding chr16-6159 chr16 23587721 23587931 + 4.36 0.000 intron (NM_005003, intron 1 of 4) intron (NM_005003, intron 1 of 4) 8490 NM_005003 4706 Hs.189716 NM_005003 ENSG00000004779 NDUFAB1 ACP|ACP1|FASN2A|SDAP NADH:ubiquinone oxidoreductase subunit AB1 protein-coding chr19-5792 chr19 34646977 34647187 + 4.36 0.000 intron (NR_027620, intron 1 of 3) intron (NR_027620, intron 1 of 3) 1209 NR_045208 100130342 Hs.679909 NR_045208 SCGB2B3P C2B|SCGB4A3P secretoglobin family 2B member 3, pseudogene pseudo chr17-7455 chr17 13815152 13815362 + 4.36 0.000 Intergenic Intergenic -209241 NR_003261 94158 Hs.633073 NR_003261 CDRT15P1 CDRT15P CMT1A duplicated region transcript 15 pseudogene 1 pseudo chr1-15292 chr1 116522340 116522550 + 4.36 0.000 intron (NM_001779, intron 3 of 5) Tigger17a|DNA|TcMar-Tigger 37666 NR_039621 100616384 NR_039621 ENSG00000264419 MIR548AC - microRNA 548ac ncRNA chr9-8335 chr9 115548679 115548889 + 4.36 0.000 Intergenic Intergenic 195455 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr19-5826 chr19 40887178 40887388 + 4.36 0.000 Intergenic L2|LINE|L2 -3543 NR_040249 22952 Hs.738699 NR_040249 ENSG00000130612 CYP2G1P CYP2G1|CYP2G2P|CYP2GP1 cytochrome P450 family 2 subfamily G member 1, pseudogene pseudo chr2-12815 chr2 91588973 91589183 + 4.36 0.000 Intergenic CpG 70871 NR_027238 654342 Hs.469287 NR_027238 LSP1P4 - LSP1 pseudogene 4 pseudo chr20-2606 chr20 39469105 39469315 + 4.36 0.000 Intergenic Intergenic -244462 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr14-4178 chr14 81400268 81400478 + 4.36 0.000 intron (NM_001366850, intron 2 of 7) intron (NM_001366850, intron 2 of 7) 27402 NM_001256430 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr4-8728 chr4 184165156 184165366 + 4.36 0.000 intron (NM_153343, intron 1 of 7) MIRb|SINE|MIR 52612 NM_153343 133121 Hs.297814 NM_153343 ENSG00000164303 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding chr2-13147 chr2 118763968 118764178 + 4.36 0.000 Intergenic Intergenic 84110 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr5-5018 chr5 84135150 84135360 + 4.36 0.000 intron (NM_001278642, intron 4 of 9) intron (NM_001278642, intron 4 of 9) 249612 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr12-5678 chr12 98047786 98047996 + 4.36 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -52443 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr18-3371 chr18 58704605 58704815 + 4.36 0.000 intron (NM_006785, intron 4 of 16) AluSx3|SINE|Alu -32837 NM_001289967 101927322 Hs.644875 NM_001289967 LOC101927322 - uncharacterized LOC101927322 protein-coding chr5-6304 chr5 122127171 122127381 + 4.36 0.000 Intergenic Intergenic -2270 NM_207317 133923 Hs.729673 NM_207317 ENSG00000164185 ZNF474 - zinc finger protein 474 protein-coding chr6-4560 chr6 42237571 42237781 + 4.36 0.000 intron (NM_001297573, intron 15 of 17) intron (NM_001297573, intron 15 of 17) -19815 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr11-5131 chr11 133626130 133626340 + 4.36 0.000 Intergenic Intergenic -93734 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr3-10969 chr3 177488192 177488402 + 4.36 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 46376 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr1-13170 chr1 203841713 203841923 + 4.36 0.000 intron (NM_014827, intron 14 of 19) SVA_B|Retroposon|SVA -19781 NR_130746 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding chr16-5471 chr16 3431927 3432137 + 4.36 0.000 TTS (NM_152457) TTS (NM_152457) 11472 NM_152457 146434 Hs.88630 NM_152457 ENSG00000167981 ZNF597 HIT-4 zinc finger protein 597 protein-coding chr11-9365 chr11 47435230 47435440 + 4.36 0.000 Intergenic AluSq|SINE|Alu -8862 NM_002804 5702 Hs.250758 NM_002804 ENSG00000165916 PSMC3 TBP1 proteasome 26S subunit, ATPase 3 protein-coding chr12-5494 chr12 125840617 125840827 + 4.36 0.000 Intergenic Intergenic 142652 NR_034132 400084 Hs.156191 NR_034132 ENSG00000249267 LINC00939 - long intergenic non-protein coding RNA 939 ncRNA chr2-4433 chr2 165726763 165726973 + 4.36 0.000 Intergenic AluJr|SINE|Alu 67379 NM_004482 2591 Hs.170986 NM_004482 ENSG00000115339 GALNT3 GalNAc-T3|HFTC|HFTC1|HHS polypeptide N-acetylgalactosaminyltransferase 3 protein-coding chr3-8519 chr3 137118298 137118508 + 4.36 0.000 Intergenic L1PB4|LINE|L1 160420 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr19-6643 chr19 33049320 33049530 + 4.36 0.000 intron (NM_033103, intron 1 of 14) intron (NM_033103, intron 1 of 14) 15463 NM_033103 85415 Hs.466435 NM_033103 ENSG00000131941 RHPN2 P76RBE|RHOBP rhophilin Rho GTPase binding protein 2 protein-coding chr10-6986 chr10 69896522 69896732 + 4.36 0.000 intron (NM_001368898, intron 9 of 33) intron (NM_001368898, intron 9 of 33) 94721 NM_001130103 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr7-6288 chr7 138937264 138937474 + 4.36 0.000 intron (NM_020910, intron 1 of 19) L2b|LINE|L2 44020 NM_001164665 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr2-10182 chr2 95365113 95365323 + 4.36 0.000 intron (NM_001034914, intron 1 of 7) AluSx|SINE|Alu 18560 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr4-8503 chr4 161067735 161067945 + 4.36 0.000 Intergenic Intergenic -954893 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr1-11342 chr1 27853218 27853428 + 4.36 0.000 Intergenic SVA_F|Retroposon|SVA 18922 NR_002997 677774 Hs.689694 NR_002997 ENSG00000252947 SCARNA1 ACA35 small Cajal body-specific RNA 1 ncRNA chr4-5909 chr4 140497813 140498023 + 4.36 0.000 intron (NM_001277353, intron 1 of 10) CpG 375 NM_001277353 152586 Hs.189067 NM_001034840 ENSG00000205301 MGAT4D GnT1IP MGAT4 family member D protein-coding chr19-5735 chr19 17994562 17994772 + 4.36 0.000 intron (NM_002248, intron 10 of 10) AluSz6|SINE|Alu -6457 NM_001025604 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr2-5175 chr2 31990472 31990682 + 4.36 0.000 intron (NR_126034, intron 1 of 6) AluSz6|SINE|Alu 20087 NM_001137602 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding chr1-12473 chr1 18409539 18409749 + 4.36 0.000 Intergenic MIRc|SINE|MIR -71286 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr1-15622 chr1 162300474 162300684 + 4.36 0.000 intron (NM_001164757, intron 3 of 9) intron (NM_001164757, intron 3 of 9) -41967 NR_030283 693141 NR_030283 ENSG00000207729 MIR556 MIRN556|hsa-mir-556|mir-556 microRNA 556 ncRNA chr9-8614 chr9 128587246 128587456 + 4.36 0.000 intron (NM_003127, intron 19 of 55) AluJb|SINE|Alu 34764 NM_001363759 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr10-5046 chr10 36636494 36636704 + 4.36 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -489258 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr1-12984 chr1 155850906 155851116 + 4.36 0.000 intron (NM_032292, intron 2 of 20) AluSx3|SINE|Alu 6203 NM_032292 54856 Hs.656361 NM_032292 ENSG00000116580 GON4L GON-4|GON4|YARP gon-4 like protein-coding chr7-7599 chr7 130217549 130217759 + 4.36 0.000 TTS (NM_145268) TTS (NM_145268) 9794 NM_145268 136263 Hs.351816 NM_145268 ENSG00000165120 SSMEM1 C7orf45 serine rich single-pass membrane protein 1 protein-coding chr12-6563 chr12 120783231 120783441 + 4.36 0.000 intron (NM_139015, intron 5 of 10) intron (NM_139015, intron 5 of 10) 57510 NM_001302554 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr20-4344 chr20 54241993 54242203 + 4.36 0.000 Intergenic L1PA4|LINE|L1 34011 NM_002623 5203 Hs.91161 NM_002623 ENSG00000101132 PFDN4 C1|PFD4 prefoldin subunit 4 protein-coding chr4-7357 chr4 57900030 57900240 + 4.36 0.000 Intergenic L1PA3|LINE|L1 474263 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr7-4129 chr7 64091841 64092051 + 4.36 0.000 Intergenic AluSz6|SINE|Alu 46512 NM_001159522 442319 Hs.640774 NM_001159522 ENSG00000214652 ZNF727 ZNF727P zinc finger protein 727 protein-coding chr1-14485 chr1 48415264 48415474 + 4.36 0.000 intron (NM_019073, intron 3 of 12) MER65A|LTR|ERV1 56835 NM_001286238 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr2-10899 chr2 69932251 69932461 + 4.36 0.000 intron (NM_001202513, intron 3 of 5) intron (NM_001202513, intron 3 of 5) 17247 NM_002357 4084 Hs.468908 NM_002357 ENSG00000059728 MXD1 BHLHC58|MAD|MAD1 MAX dimerization protein 1 protein-coding chr12-8103 chr12 119189937 119190147 + 4.36 0.000 intron (NM_014365, intron 2 of 2) MIRb|SINE|MIR 11252 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr2-12245 chr2 44144004 44144214 + 4.36 0.000 Intergenic AluJr4|SINE|Alu -24694 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr9-8737 chr9 132585212 132585422 + 4.36 0.000 intron (NM_020064, intron 1 of 2) intron (NM_020064, intron 1 of 2) 2711 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr12-6982 chr12 29693978 29694188 + 4.36 0.000 intron (NM_001367875, intron 5 of 19) intron (NM_001367875, intron 5 of 19) 89859 NM_001193451 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr5-7026 chr5 159038728 159038938 + 4.36 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 59123 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr2-12172 chr2 39696169 39696379 + 4.36 0.000 intron (NM_152390, intron 1 of 3) intron (NM_152390, intron 1 of 3) 30357 NM_152390 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr18-2292 chr18 77165359 77165569 + 4.36 0.000 Intergenic Intergenic -32681 NM_001025101 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr7-5883 chr7 93363788 93363998 + 4.36 0.000 Intergenic Intergenic 118962 NR_030388 724023 NR_030388 ENSG00000208014 MIR653 MIRN653|hsa-mir-653|mir-653 microRNA 653 ncRNA chr12-5852 chr12 48724723 48724933 + 4.36 0.000 Intergenic SVA_D|Retroposon|SVA -2607 NM_001351125 255411 Hs.404103 NM_001351123 ENSG00000257987 TEX49 LINC00935 testis expressed 49 protein-coding chr13-2285 chr13 29384553 29384763 + 4.36 0.000 intron (NM_001033602, intron 6 of 13) intron (NM_001033602, intron 6 of 13) -44002 NM_015233 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr14-2637 chr14 67251746 67251956 + 4.36 0.000 intron (NM_001256550, intron 1 of 14) MER21C|LTR|ERVL 10416 NM_022474 64398 Hs.652312 NM_022474 ENSG00000072415 MPP5 PALS1 membrane palmitoylated protein 5 protein-coding chr3-9415 chr3 48540238 48540448 + 4.36 0.000 intron (NM_001317135, intron 4 of 13) intron (NM_001317135, intron 4 of 13) 9678 NR_106881 102465494 NR_106881 ENSG00000278799 MIR6823 hsa-mir-6823 microRNA 6823 ncRNA chr12-5085 chr12 94031208 94031418 + 4.36 0.000 Intergenic MER5A1|DNA|hAT-Charlie -87707 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr1-14873 chr1 80890882 80891092 + 4.36 0.000 Intergenic Intergenic 249700 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr21-1477 chr21 37589635 37589845 + 4.36 0.000 Intergenic HERVH-int|LTR|ERV1 169441 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr4-6405 chr4 122865445 122865655 + 4.36 0.000 intron (NM_001361665, intron 1 of 2) AluSz6|SINE|Alu 38719 NM_001361665 2247 Hs.284244 NM_002006 ENSG00000138685 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 protein-coding chr18-1661 chr18 62627541 62627751 + 4.36 0.000 Intergenic AluJb|SINE|Alu -87895 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr17-6965 chr17 47632502 47632712 + 4.36 0.000 Intergenic Intergenic -17312 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr2-14555 chr2 230875871 230876081 + 4.36 0.000 intron (NM_001012516, intron 3 of 4) intron (NM_001012516, intron 3 of 4) -10570 NR_038238 151484 Hs.559309 NR_038238 ENSG00000232520 LOC151484 - uncharacterized LOC151484 ncRNA chr18-1367 chr18 27312700 27312910 + 4.36 0.000 Intergenic Intergenic 29851 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr16-5117 chr16 89033855 89034065 + 4.36 0.000 Intergenic Intergenic -56753 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr9-8351 chr9 116854529 116854739 + 4.36 0.000 intron (NM_014010, intron 10 of 21) intron (NM_014010, intron 10 of 21) 167329 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr14-4608 chr14 52240727 52240937 + 4.36 0.000 Intergenic L2a|LINE|L2 -26866 NM_000953 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding chr6-7533 chr6 68913624 68913834 + 4.36 0.000 intron (NM_001704, intron 3 of 31) L1P1|LINE|L1 278447 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr22-3450 chr22 41392645 41392855 + 4.36 0.000 intron (NM_003216, intron 2 of 3) intron (NM_003216, intron 2 of 3) 10808 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr3-8622 chr3 169662629 169662839 + 4.36 0.000 intron (NM_001366473, intron 1 of 15) CpG 978 NM_001366466 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr2-10684 chr2 24879269 24879479 + 4.36 0.000 intron (NM_001320613, intron 2 of 21) AluY|SINE|Alu 40863 NM_001320613 109 Hs.467898 NM_004036 ENSG00000138031 ADCY3 AC-III|AC3|BMIQ19 adenylate cyclase 3 protein-coding chr2-6790 chr2 47752864 47753074 + 4.36 0.000 Intergenic AluSp|SINE|Alu -30113 NM_001281492 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr2-10985 chr2 98912132 98912342 + 4.36 0.000 intron (NM_207362, intron 1 of 9) intron (NM_207362, intron 1 of 9) 23988 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr11-7048 chr11 119886715 119886925 + 4.36 0.000 Intergenic (GAGGTGG)n|Simple_repeat|Simple_repeat 157237 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr5-4575 chr5 24315300 24315510 + 4.36 0.000 Intergenic LTR12D|LTR|ERV1 329573 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr16-5550 chr16 28890703 28890913 + 4.36 0.000 intron (NM_173201, intron 9 of 21) AluSz|SINE|Alu 10765 NM_001286075 487 Hs.657344 NM_004320 ENSG00000196296 ATP2A1 ATP2A|SERCA1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 protein-coding chr4-5710 chr4 35610165 35610375 + 4.36 0.000 Intergenic L1MA8|LINE|L1 633669 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr5-6319 chr5 129112778 129112988 + 4.36 0.000 exon (NM_016048, exon 5 of 5) exon (NM_016048, exon 5 of 5) 15195 NR_039776 100616175 NR_039776 ENSG00000264563 MIR4633 - microRNA 4633 ncRNA chr3-10043 chr3 104094514 104094724 + 4.36 0.000 Intergenic Intergenic -570503 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr11-9332 chr11 46315320 46315530 + 4.36 0.000 intron (NM_052854, intron 8 of 11) L2c|LINE|L2 -17501 NM_201532 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr8-5324 chr8 144781205 144781415 + 4.36 0.000 intron (NM_001286769, intron 1 of 5) AluY|SINE|Alu 6035 NM_001286770 80778 Hs.631854 NM_030580 ENSG00000196378 ZNF34 KOX32 zinc finger protein 34 protein-coding chr1-16720 chr1 247524210 247524420 + 4.36 0.000 TTS (NR_027309) TTS (NR_027309) 5863 NM_001281837 148823 Hs.732113 NM_145278 ENSG00000169224 GCSAML C1orf150 germinal center associated signaling and motility like protein-coding chr9-6754 chr9 19550884 19551094 + 4.36 0.000 intron (NM_020344, intron 6 of 9) L1MA4A|LINE|L1 141980 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr1-12279 chr1 230549373 230549583 + 4.36 0.000 Intergenic Intergenic 46105 NR_146479 101927553 Hs.680219 NR_146479 ENSG00000232964 LINC01737 - long intergenic non-protein coding RNA 1737 ncRNA chr16-5217 chr16 26040671 26040881 + 4.36 0.000 intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) 15539 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr3-7953 chr3 160902752 160902962 + 4.36 0.000 intron (NR_134243, intron 2 of 5) intron (NR_134243, intron 2 of 5) 32259 NR_134243 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr10-4572 chr10 106645071 106645281 + 4.36 0.000 intron (NM_001206569, intron 18 of 25) AluSz|SINE|Alu 505011 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr2-14605 chr2 233502267 233502477 + 4.36 0.000 intron (NM_001365479, intron 21 of 31) Tigger4a|DNA|TcMar-Tigger 63201 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr14-2108 chr14 74250502 74250712 + 4.36 0.000 intron (NM_182894, intron 3 of 4) intron (NM_182894, intron 3 of 4) 11158 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr5-7117 chr5 280275 280485 + 4.36 0.000 intron (NM_001267557, intron 2 of 3) intron (NM_001267557, intron 2 of 3) 8734 NM_001267559 10016 Hs.50823 NM_013232 ENSG00000249915 PDCD6 ALG-2|ALG2|PEF1B programmed cell death 6 protein-coding chr8-5270 chr8 138390310 138390520 + 4.36 0.000 intron (NM_001362965, intron 1 of 19) THE1B|LTR|ERVL-MaLR 106846 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr4-6399 chr4 118742041 118742251 + 4.36 0.000 intron (NM_014822, intron 15 of 22) intron (NM_014822, intron 15 of 22) 56754 NM_020961 57721 Hs.596872 NM_020961 ENSG00000145388 METTL14 hMETTL14 methyltransferase like 14 protein-coding chr1-13127 chr1 200381571 200381781 + 4.36 0.000 Intergenic Intergenic -7884 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr7-9643 chr7 151123326 151123536 + 4.36 0.000 3' UTR (NM_001308304, exon 8 of 8) 3' UTR (NM_001308304, exon 8 of 8) 8793 NM_001308305 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr12-7336 chr12 55383809 55384019 + 4.36 0.000 Intergenic AluSx|SINE|Alu -16615 NM_001005518 403282 Hs.554553 NM_001005518 ENSG00000205328 OR6C65 - olfactory receptor family 6 subfamily C member 65 protein-coding chr11-7251 chr11 13356141 13356351 + 4.36 0.000 intron (NM_001351822, intron 4 of 18) intron (NM_001351822, intron 4 of 18) 78519 NM_001351822 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chrX-1053 chrX 119415895 119416105 + 4.36 0.000 intron (NM_145305, intron 3 of 4) AluJb|SINE|Alu 16664 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr6-7536 chr6 69096620 69096830 + 4.36 0.000 intron (NM_001704, intron 17 of 31) intron (NM_001704, intron 17 of 31) 461443 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr16-3796 chr16 35309119 35309329 + 4.36 0.000 Intergenic Intergenic -54192 NR_027080 283914 Hs.385772 NR_027079 ENSG00000259841 LINC01566 - long intergenic non-protein coding RNA 1566 ncRNA chr3-6959 chr3 163100774 163100984 + 4.36 0.000 Intergenic Intergenic 202422 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr1-12232 chr1 213146327 213146537 + 4.36 0.000 intron (NM_001136138, intron 5 of 13) AluSc8|SINE|Alu 95191 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr4-6406 chr4 123341545 123341755 + 4.36 0.000 Intergenic Intergenic -55145 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr12-8015 chr12 112747235 112747445 + 4.36 0.000 intron (NM_001347952, intron 1 of 21) MLT1A0|LTR|ERVL-MaLR -44198 NM_001347953 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr3-11250 chr3 197060932 197061142 + 4.36 0.000 intron (NM_001366216, intron 21 of 23) AluSz|SINE|Alu -31220 NM_033316 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chr1-12724 chr1 56743866 56744076 + 4.36 0.000 intron (NM_001004303, intron 11 of 19) intron (NM_001004303, intron 11 of 19) 75433 NM_001004303 199920 Hs.437655 NM_001004303 ENSG00000187889 FYB2 ARAP|C1orf168 FYN binding protein 2 protein-coding chr3-7313 chr3 30848160 30848370 + 4.36 0.000 intron (NM_207359, intron 6 of 14) intron (NM_207359, intron 6 of 14) 46396 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr10-6188 chr10 22252655 22252865 + 4.36 0.000 non-coding (NR_038921, exon 1 of 1) non-coding (NR_038921, exon 1 of 1) 688 NR_038921 100130992 Hs.48501 NR_038921 LOC100130992 - uncharacterized LOC100130992 ncRNA chr6-8561 chr6 163371180 163371390 + 4.36 0.000 Intergenic Intergenic -24252 NR_033862 401282 Hs.444817 NR_033862 ENSG00000285564 DKFZp451B082 - uncharacterized LOC401282 ncRNA chrX-4759 chrX 95072075 95072285 + 4.36 0.000 Intergenic L1PBa|LINE|L1 -8954 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr1-12503 chr1 21370786 21370996 + 4.36 0.000 Intergenic Intergenic -25387 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr8-5822 chr8 4573791 4574001 + 4.36 0.000 intron (NM_033225, intron 2 of 69) L1PA7|LINE|L1 421018 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr6-6396 chr6 81138273 81138483 + 4.36 0.000 Intergenic L1PA14|LINE|L1 614303 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr5-5392 chr5 134777959 134778169 + 4.36 0.000 intron (NM_001300860, intron 6 of 22) AluJb|SINE|Alu 19285 NM_001300860 9879 Hs.406549 NM_014829 ENSG00000145833 DDX46 PRPF5|Prp5 DEAD-box helicase 46 protein-coding chr10-8876 chr10 112826664 112826874 + 4.36 0.000 non-coding (NR_120684, exon 1 of 1) non-coding (NR_120684, exon 1 of 1) 3273 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr7-3009 chr7 47398977 47399187 + 4.36 0.000 intron (NM_022748, intron 15 of 30) L1PB|LINE|L1 65721 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr5-8894 chr5 155768545 155768755 + 4.36 0.000 Intergenic Intergenic -558107 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr4-7694 chr4 88299071 88299281 + 4.36 0.000 intron (NR_134237, intron 1 of 3) AluSc5|SINE|Alu 14246 NR_134237 105369192 Hs.733660 NR_134236 ENSG00000246375 PPM1K-DT - PPM1K divergent transcript ncRNA chr1-14840 chr1 76145238 76145448 + 4.36 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 70597 NM_152996 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr14-4880 chr14 71536710 71536920 + 4.36 0.000 intron (NM_001354289, intron 5 of 23) intron (NM_001354289, intron 5 of 23) 48954 NR_027046 145474 Hs.658241 NR_027046 LOC145474 - uncharacterized LOC145474 ncRNA chr6-8572 chr6 163718037 163718247 + 4.36 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -46658 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr14-3582 chr14 20624788 20624998 + 4.36 0.000 Intergenic CpG 16798 NM_001001968 341799 Hs.513132 NM_001001968 ENSG00000181803 OR6S1 OR14-37|OR6S1Q olfactory receptor family 6 subfamily S member 1 protein-coding chr1-12162 chr1 181779720 181779930 + 4.36 0.000 intron (NM_001205293, intron 38 of 47) (AC)n|Simple_repeat|Simple_repeat 281887 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr7-7537 chr7 108807995 108808205 + 4.36 0.000 Intergenic Intergenic 76487 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr6-2941 chr6 31455648 31455858 + 4.36 0.000 Intergenic SVA_D|Retroposon|SVA -7427 NR_040662 10866 Hs.691948 NR_040662 ENSG00000206337 HCP5 6S2650E|D6S2650E|P5-1 HLA complex P5 ncRNA chr7-7241 chr7 26506208 26506418 + 4.36 0.000 intron (NR_148500, intron 5 of 5) intron (NR_148500, intron 5 of 5) 32512 NR_022006 9808 Hs.69749 NM_014769 ENSG00000122548 KIAA0087 - KIAA0087 lncRNA ncRNA chr13-1413 chr13 32364938 32365148 + 4.36 0.000 intron (NM_000059, intron 18 of 26) HAL1|LINE|L1 49563 NM_000059 675 Hs.34012 NM_000059 ENSG00000139618 BRCA2 BRCC2|BROVCA2|FACD|FAD|FAD1|FANCD|FANCD1|GLM3|PNCA2|XRCC11 BRCA2 DNA repair associated protein-coding chr9-7637 chr9 40884924 40885134 + 4.36 0.000 Intergenic Intergenic 44063 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr19-3924 chr19 47007195 47007405 + 4.36 0.000 Intergenic Intergenic -12537 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr19-5870 chr19 45412644 45412854 + 4.36 0.000 TTS (NM_001369411) TTS (NM_001369411) 6105 NM_012099 10849 Hs.710495 NM_012099 ENSG00000117877 CD3EAP ASE-1|ASE1|CAST|PAF49 CD3e molecule associated protein protein-coding chr5-8076 chr5 95285218 95285428 + 4.36 0.000 promoter-TSS (NM_024717) promoter-TSS (NM_024717) -748 NM_024717 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chrX-4202 chrX 36182038 36182248 + 4.36 0.000 intron (NM_001304548, intron 40 of 63) MLT1J|LTR|ERVL-MaLR 258149 NR_110412 101928627 Hs.590831 NR_110412 ENSG00000226484 LOC101928627 - uncharacterized LOC101928627 ncRNA chr5-9130 chr5 175479433 175479643 + 4.36 0.000 intron (NM_001322982, intron 1 of 10) L2a|LINE|L2 978 NM_022754 94081 Hs.369440 NM_022754 ENSG00000164466 SFXN1 SLC56A1|TCC sideroflexin 1 protein-coding chr21-1898 chr21 44345084 44345294 + 4.36 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -5799 NM_001271440 755 Hs.517331 NM_004928 ENSG00000160226 CFAP410 C21orf2|LRRC76|RDMS|SMDAX|YF5/A2 cilia and flagella associated protein 410 protein-coding chr15-3469 chr15 94546149 94546359 + 4.36 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 190324 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chrX-4223 chrX 38062535 38062745 + 4.36 0.000 intron (NM_001163334, intron 2 of 16) MER90a|LTR|ERV1 29106 NM_001163334 94122 Hs.662334 NM_138780 ENSG00000147041 SYTL5 slp5 synaptotagmin like 5 protein-coding chr12-6514 chr12 108612164 108612374 + 4.36 0.000 Intergenic Intergenic -14185 NM_181724 338773 Hs.449718 NM_181724 ENSG00000183160 TMEM119 OBIF transmembrane protein 119 protein-coding chr1-15525 chr1 156913111 156913321 + 4.36 0.000 exon (NM_001353682, exon 19 of 23) exon (NM_001353682, exon 19 of 23) -7416 NM_144702 149499 Hs.491734 NM_144702 ENSG00000160838 LRRC71 C1orf92 leucine rich repeat containing 71 protein-coding chr10-6631 chr10 98604601 98604811 + 4.36 0.000 intron (NM_021828, intron 9 of 11) intron (NM_021828, intron 9 of 11) -157743 NM_001322482 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr8-5918 chr8 18162890 18163100 + 4.36 0.000 Intergenic L1MA7|LINE|L1 -7472 NM_001291962 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr8-5914 chr8 17836404 17836614 + 4.36 0.000 Intergenic Intergenic -34930 NM_001363061 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr4-5994 chr4 186037756 186037966 + 4.36 0.000 Intergenic Intergenic -31294 NM_003265 7098 Hs.657724 NM_003265 ENSG00000164342 TLR3 CD283|IIAE2 toll like receptor 3 protein-coding chr9-7298 chr9 9623739 9623949 + 4.36 0.000 intron (NM_002839, intron 7 of 45) intron (NM_002839, intron 7 of 45) -175548 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr9-8422 chr9 121148380 121148590 + 4.36 0.000 intron (NR_163191, intron 12 of 18) intron (NR_163191, intron 12 of 18) 26715 NR_163191 11064 Hs.653263 NM_007018 ENSG00000119397 CNTRL CEP1|CEP110|FAN|bA165P4.1 centriolin protein-coding chr12-6194 chr12 21322814 21323024 + 4.36 0.000 intron (NM_021094, intron 1 of 13) MER4B-int|LTR|ERV1 11998 NM_021094 6579 Hs.46440 NM_005075 ENSG00000084453 SLCO1A2 OATP|OATP-A|OATP1A2|SLC21A3 solute carrier organic anion transporter family member 1A2 protein-coding chr8-5787 chr8 143625896 143626106 + 4.36 0.000 Intergenic AluY|SINE|Alu -8452 NM_001317783 7264 Hs.404119 NM_003313 ENSG00000104522 TSTA3 FX|P35B|SDR4E1 tissue specific transplantation antigen P35B protein-coding chr4-7420 chr4 66105722 66105932 + 4.36 0.000 Intergenic Intergenic -170997 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr5-8276 chr5 113104123 113104333 + 4.36 0.000 exon (NM_002387, exon 5 of 17) exon (NM_002387, exon 5 of 17) 127430 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr5-6870 chr5 121834599 121834809 + 4.36 0.000 Intergenic MER50|LTR|ERV1 -17178 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding chr2-12239 chr2 44037077 44037287 + 4.36 0.000 Intergenic Intergenic -41193 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr15-3860 chr15 89648736 89648946 + 4.36 0.000 intron (NM_198525, intron 4 of 18) CpG-8588 6626 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chr1-8384 chr1 74782132 74782342 + 4.36 0.000 Intergenic Intergenic -48829 NM_001130043 1429 Hs.83114 NM_001889 ENSG00000116791 CRYZ - crystallin zeta protein-coding chr6-6668 chr6 163194839 163195049 + 4.36 0.000 intron (NM_001080379, intron 4 of 4) intron (NM_001080379, intron 4 of 4) -2942 NR_122120 729658 Hs.728991 NR_122120 PACRG-AS3 - PACRG antisense RNA 3 ncRNA chr16-5272 chr16 56841297 56841507 + 4.36 0.000 intron (NM_014669, intron 20 of 21) intron (NM_014669, intron 20 of 21) -17116 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr2-10974 chr2 95299217 95299427 + 4.36 0.000 intron (NM_013434, intron 1 of 8) intron (NM_013434, intron 1 of 8) 1975 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr4-8346 chr4 147208033 147208243 + 4.36 0.000 Intergenic L2|LINE|L2 136579 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA chr20-4362 chr20 56257980 56258190 + 4.36 0.000 Intergenic Intergenic 9353 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr10-6412 chr10 12336668 12336878 + 4.36 0.000 Intergenic Intergenic -12774 NM_020397 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chrX-4699 chrX 86598724 86598934 + 4.36 0.000 intron (NM_001139515, intron 3 of 11) L1PA5|LINE|L1 335861 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr16-6096 chr16 12539914 12540124 + 4.36 0.000 intron (NM_032167, intron 20 of 20) L1MD3|LINE|L1 -180302 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr7-5920 chr7 98811292 98811502 + 4.36 0.000 Intergenic (TGG)n|Simple_repeat|Simple_repeat 58617 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr17-3329 chr17 73103113 73103323 + 4.36 0.000 Intergenic Intergenic -10530 NM_001352692 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr5-4562 chr5 21828737 21828947 + 4.36 0.000 intron (NM_004061, intron 8 of 14) (ATTTGT)n|Simple_repeat|Simple_repeat -55612 NR_132788 106635540 NR_132788 SNORA105B - small nucleolar RNA, H/ACA box 105B snoRNA chr20-3839 chr20 24705538 24705748 + 4.36 0.000 Intergenic Intergenic 235682 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chrX-4355 chrX 48731055 48731265 + 4.36 0.000 Intergenic Intergenic -30587 NM_001080489 392465 Hs.437539 NM_001080489 ENSG00000171433 GLOD5 - glyoxalase domain containing 5 protein-coding chr1-14263 chr1 36889342 36889552 + 4.36 0.000 intron (NM_000831, intron 2 of 15) L2b|LINE|L2 145068 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr20-3113 chr20 31909127 31909337 + 4.36 0.000 intron (NR_148013, intron 5 of 16) AluSq2|SINE|Alu 29415 NR_160277 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr2-13403 chr2 140610781 140610991 + 4.36 0.000 intron (NM_018557, intron 41 of 90) MIR|SINE|MIR -24201 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr22-3441 chr22 40609899 40610109 + 4.36 0.000 intron (NM_020831, intron 1 of 14) intron (NM_020831, intron 1 of 14) 26715 NM_020831 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr8-4209 chr8 85517759 85517969 + 4.36 0.000 Intergenic AluJb|SINE|Alu -52949 NR_121630 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA chr10-7082 chr10 91104150 91104360 + 4.36 0.000 Intergenic Intergenic 48825 NR_002779 119369 Hs.441287 NR_002779 NUDT9P1 C10orf98|bA56M3.1 nudix hydrolase 9 pseudogene 1 pseudo chr10-8944 chr10 117249158 117249368 + 4.36 0.000 intron (NM_003054, intron 3 of 15) intron (NM_003054, intron 3 of 15) 8149 NM_003054 6571 Hs.596992 NM_003054 ENSG00000165646 SLC18A2 PKDYS2|SVAT|SVMT|VAT2|VMAT2 solute carrier family 18 member A2 protein-coding chr13-3649 chr13 31747281 31747491 + 4.36 0.000 intron (NM_130806, intron 1 of 17) intron (NM_130806, intron 1 of 17) 7844 NM_001166058 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr2-13392 chr2 138846125 138846335 + 4.36 0.000 Intergenic Intergenic -51094 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr1-13003 chr1 159848986 159849196 + 4.36 0.000 intron (NR_147123, intron 1 of 3) intron (NR_147123, intron 1 of 3) 5946 NR_147124 284677 Hs.647718 NM_001134233 ENSG00000256029 SNHG28 C1orf204|VSIG8-OT1 small nucleolar RNA host gene 28 ncRNA chr15-5202 chr15 94480937 94481147 + 4.36 0.000 3' UTR (NM_001159643, exon 20 of 20) 3' UTR (NM_001159643, exon 20 of 20) 125112 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr10-2981 chr10 75409610 75409820 + 4.36 0.000 TTS (NR_024421) TTS (NR_024421) 558 NR_110304 101929234 Hs.694695 NR_110304 LOC101929234 - uncharacterized LOC101929234 ncRNA chr15-4484 chr15 50706371 50706581 + 4.36 0.000 3' UTR (NM_032802, exon 15 of 15) 3' UTR (NM_032802, exon 15 of 15) -19679 NR_149154 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr10-6462 chr10 33182830 33183040 + 4.36 0.000 intron (NM_001244973, intron 15 of 16) intron (NM_001244973, intron 15 of 16) -66128 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr11-10454 chr11 117442591 117442801 + 4.36 0.000 intron (NM_020693, intron 21 of 32) intron (NM_020693, intron 21 of 32) 114842 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr4-8095 chr4 124729691 124729901 + 4.36 0.000 Intergenic L2a|LINE|L2 -17064 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr3-9036 chr3 22512314 22512524 + 4.36 0.000 Intergenic L1MA2|LINE|L1 555280 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr6-7242 chr6 41514802 41515012 + 4.36 0.000 intron (NR_120347, intron 2 of 2) intron (NR_120347, intron 2 of 2) 12463 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr16-6291 chr16 35113663 35113873 + 4.36 0.000 Intergenic L1MEd|LINE|L1 56623 NR_002837 606551 Hs.646441 NR_002837 UBE2MP1 - ubiquitin conjugating enzyme E2 M pseudogene 1 pseudo chr6-6236 chr6 24349611 24349821 + 4.36 0.000 intron (NM_016356, intron 2 of 9) intron (NM_016356, intron 2 of 9) -7187 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr5-9124 chr5 174356071 174356281 + 4.36 0.000 intron (NR_125806, intron 1 of 5) intron (NR_125806, intron 1 of 5) 19822 NR_125806 101928176 Hs.436014 NR_125806 ENSG00000249306 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA chr8-5107 chr8 60862685 60862895 + 4.36 0.000 intron (NM_017780, intron 37 of 37) intron (NM_017780, intron 37 of 37) 104958 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chrX-4912 chrX 108598685 108598895 + 4.36 0.000 exon (NM_000495, exon 25 of 51) exon (NM_000495, exon 25 of 51) 137587 NM_003604 8471 Hs.407141 NM_003604 ENSG00000133124 IRS4 IRS-4|PY160 insulin receptor substrate 4 protein-coding chr3-4614 chr3 9452574 9452784 + 4.36 0.000 intron (NM_001080517, intron 16 of 22) (T)n|Simple_repeat|Simple_repeat 54979 NM_001080517 55209 Hs.288164 NM_018187 ENSG00000168137 SETD5 - SET domain containing 5 protein-coding chr6-8616 chr6 169269552 169269762 + 4.36 0.000 Intergenic Intergenic -15543 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr1-15044 chr1 94030296 94030506 + 4.36 0.000 intron (NM_000350, intron 29 of 49) intron (NM_000350, intron 29 of 49) 90747 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr18-3285 chr18 52940473 52940683 + 4.36 0.000 intron (NM_005215, intron 5 of 28) CR1_Mam|LINE|CR1 -296523 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr3-6725 chr3 136560535 136560745 + 4.36 0.000 intron (NM_005862, intron 5 of 33) intron (NM_005862, intron 5 of 33) 191738 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr1-10107 chr1 98995433 98995643 + 4.36 0.000 intron (NM_001037317, intron 1 of 5) LTR82A|LTR|ERVL -8738 NR_033940 100129620 Hs.588631 NR_033940 ENSG00000232825 LOC100129620 - uncharacterized LOC100129620 ncRNA chr5-8346 chr5 119612328 119612538 + 4.36 0.000 Intergenic L2c|LINE|L2 -17125 NM_001367956 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr2-8490 chr2 127333035 127333245 + 4.36 0.000 intron (NM_006609, intron 4 of 15) AluJb|SINE|Alu 10089 NM_006609 10746 Hs.145605 NM_006609 ENSG00000169967 MAP3K2 MEKK2|MEKK2B mitogen-activated protein kinase kinase kinase 2 protein-coding chr13-3020 chr13 20381419 20381629 + 4.36 0.000 Intergenic Intergenic 52322 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr7-7213 chr7 20717366 20717576 + 4.36 0.000 intron (NM_178559, intron 11 of 18) AluSg|SINE|Alu 69415 NM_182700 221833 Hs.195922 NM_182700 ENSG00000164651 SP8 BTD Sp8 transcription factor protein-coding chr17-7569 chr17 20053555 20053765 + 4.36 0.000 intron (NM_001243439, intron 1 of 14) MLT1F1|LTR|ERVL-MaLR -33362 NM_001033553 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr18-2653 chr18 47485411 47485621 + 4.36 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 105020 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr17-8680 chr17 82480914 82481124 + 4.36 0.000 intron (NM_001038618, intron 6 of 10) intron (NM_001038618, intron 6 of 10) 22278 NM_012336 26502 Hs.256526 NM_012336 ENSG00000141562 NARF IOP2 nuclear prelamin A recognition factor protein-coding chr14-5067 chr14 83838308 83838518 + 4.36 0.000 Intergenic Intergenic 1195781 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr6-7397 chr6 51109464 51109674 + 4.36 0.000 Intergenic Intergenic 290698 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr2-14598 chr2 232660473 232660683 + 4.36 0.000 intron (NM_001308395, intron 2 of 4) FLAM_C|SINE|Alu 26974 NM_025202 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chrX-2214 chrX 41734425 41734635 + 4.36 0.000 intron (NM_003688, intron 5 of 26) intron (NM_003688, intron 5 of 26) 10349 NM_080817 27197 Hs.567457 NM_080817 ENSG00000171657 GPR82 - G protein-coupled receptor 82 protein-coding chr11-4088 chr11 31044330 31044540 + 4.36 0.000 intron (NM_001367979, intron 20 of 38) AluY|SINE|Alu -51749 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr5-7266 chr5 12888833 12889043 + 4.36 0.000 intron (NR_147005, intron 4 of 4) intron (NR_147005, intron 4 of 4) 143948 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr10-6779 chr10 1865440 1865650 + 4.36 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -128020 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr8-5631 chr8 102782019 102782229 + 4.36 0.000 Intergenic FLAM_A|SINE|Alu -24698 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr11-9046 chr11 27718567 27718777 + 4.36 0.000 intron (NM_170731, intron 1 of 1) intron (NM_170731, intron 1 of 1) 894 NM_001143807 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr8-7206 chr8 125950354 125950564 + 4.36 0.000 intron (NR_038446, intron 1 of 1) intron (NR_038446, intron 1 of 1) 738 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr10-6700 chr10 121561452 121561662 + 4.36 0.000 intron (NR_073009, intron 2 of 16) L1MC1|LINE|L1 -30243 NM_001320654 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr13-4438 chr13 111515661 111515871 + 4.36 0.000 Intergenic Intergenic -80243 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr2-12646 chr2 73908093 73908303 + 4.36 0.000 intron (NM_001615, intron 3 of 8) LTR33|LTR|ERVL 15190 NM_001199893 72 Hs.516105 NM_001615 ENSG00000163017 ACTG2 ACT|ACTA3|ACTE|ACTL3|ACTSG|VSCM actin gamma 2, smooth muscle protein-coding chr6-5362 chr6 150094377 150094587 + 4.36 0.000 Intergenic AluYc|SINE|Alu -25361 NM_024518 79465 Hs.15422 NM_024518 ENSG00000131019 ULBP3 N2DL-3|NKG2DL3|RAET1N UL16 binding protein 3 protein-coding chr5-4852 chr5 63880129 63880339 + 4.36 0.000 Intergenic AluSx|SINE|Alu 82058 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr12-6829 chr12 13532573 13532783 + 4.36 0.000 Intergenic Intergenic -155933 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr5-5147 chr5 106914732 106914942 + 4.36 0.000 intron (NR_104671, intron 2 of 3) HERVL-int|LTR|ERVL 96177 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr3-8333 chr3 71428866 71429076 + 4.36 0.000 intron (NR_146142, intron 3 of 19) intron (NR_146142, intron 3 of 19) 113118 NR_031697 100302112 NR_031697 ENSG00000221264 MIR1284 MIRN1284|hsa-mir-1284|mir-1284 microRNA 1284 ncRNA chr5-6644 chr5 50759080 50759290 + 4.36 0.000 intron (NM_024615, intron 3 of 25) AluSz|SINE|Alu 91771 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr2-6253 chr2 42201984 42202194 + 4.36 0.000 intron (NM_001145076, intron 1 of 21) AluSz|SINE|Alu -31858 NR_110584 102723824 Hs.639826 NR_110584 LOC102723824 - uncharacterized LOC102723824 ncRNA chrX-1424 chrX 40158451 40158661 + 4.36 0.000 intron (NM_001123384, intron 1 of 13) CpG 18721 NM_001123384 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr17-7804 chr17 40009449 40009659 + 4.36 0.000 Intergenic MER58B|DNA|hAT-Charlie -5886 NR_033662 1440 Hs.2233 NM_000759 ENSG00000108342 CSF3 C17orf33|CSF3OS|GCSF colony stimulating factor 3 protein-coding chr14-3881 chr14 91264566 91264776 + 4.36 0.000 Intergenic CpG -10791 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr7-6604 chr7 99456959 99457169 + 4.36 0.000 3' UTR (NM_006693, exon 8 of 8) 3' UTR (NM_006693, exon 8 of 8) 9103 NM_001198879 100526740 NM_001198879 ENSG00000248919 ATP5MF-PTCD1 ATP5J2-PTCD1 ATP5MF-PTCD1 readthrough protein-coding chr11-10333 chr11 110069331 110069541 + 4.36 0.000 Intergenic Intergenic -23956 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr6-7827 chr6 102616567 102616777 + 4.36 0.000 Intergenic HERV4_I-int|LTR|ERV1 1217687 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr3-8053 chr3 4151124 4151334 + 4.36 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -152075 NM_001320677 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr3-7762 chr3 66883485 66883695 + 4.36 0.000 Intergenic Intergenic -114717 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr4-5668 chr4 17477480 17477690 + 4.36 0.000 Intergenic LTR33A|LTR|ERVL 34505 NM_000320 5860 Hs.75438 NM_000320 ENSG00000151552 QDPR DHPR|HDHPR|PKU2|SDR33C1 quinoid dihydropteridine reductase protein-coding chr12-7828 chr12 100360713 100360923 + 4.36 0.000 intron (NM_001145288, intron 1 of 10) intron (NM_001145288, intron 1 of 10) 3744 NM_001145288 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr14-4532 chr14 41341790 41342000 + 4.36 0.000 Intergenic MamGyp-int|LTR|Gypsy -264961 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr22-3842 chr22 32310217 32310427 + 4.36 0.000 Intergenic MIR3|SINE|MIR -44563 NM_006604 10738 Hs.558455 NM_006604 ENSG00000128276 RFPL3 RNF120 ret finger protein like 3 protein-coding chr6-7356 chr6 47784081 47784291 + 4.36 0.000 intron (NM_181744, intron 1 of 6) intron (NM_181744, intron 1 of 6) 2147 NM_181744 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr14-4016 chr14 42549118 42549328 + 4.36 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 942367 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr9-8360 chr9 117381894 117382104 + 4.36 0.000 intron (NM_014010, intron 1 of 21) L2|LINE|L2 33058 NM_001365068 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr12-6973 chr12 28974471 28974681 + 4.36 0.000 Intergenic Intergenic -174702 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr6-6557 chr6 135076141 135076351 + 4.36 0.000 Intergenic AluJr4|SINE|Alu -21424 NM_001145158 10767 Hs.378532 NM_006620 ENSG00000112339 HBS1L EF-1a|ERFS|HBS1|HSPC276|eRF3c HBS1 like translational GTPase protein-coding chr10-6441 chr10 25898268 25898478 + 4.36 0.000 Intergenic LTR9D|LTR|ERV1 35337 NR_120650 101929073 Hs.409816 NR_120650 ENSG00000226304 LOC101929073 - uncharacterized LOC101929073 ncRNA chr8-4980 chr8 134418304 134418514 + 4.36 0.000 Intergenic AluSx1|SINE|Alu -179662 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr9-7772 chr9 77708356 77708566 + 4.36 0.000 Intergenic L1MCa|LINE|L1 -60139 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr11-8090 chr11 38032196 38032406 + 4.36 0.000 Intergenic Intergenic 93700 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr1-11838 chr1 33973785 33973995 + 4.36 0.000 intron (NM_052896, intron 3 of 69) intron (NM_052896, intron 3 of 69) 104934 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr4-5992 chr4 185496117 185496327 + 4.36 0.000 Intergenic Intergenic -24489 NM_001145411 256309 Hs.41101 NM_152775 ENSG00000168491 CCDC110 CT52|KM-HN-1|KMHN1 coiled-coil domain containing 110 protein-coding chr3-8087 chr3 12976070 12976280 + 4.36 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -8445 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr7-7874 chr7 5727139 5727349 + 4.36 0.000 intron (NM_207111, intron 7 of 16) intron (NM_207111, intron 7 of 16) -15334 NR_106934 102466203 NR_106934 ENSG00000283419 MIR6874 hsa-mir-6874 microRNA 6874 ncRNA chr3-10077 chr3 108586204 108586414 + 4.36 0.000 intron (NM_020890, intron 1 of 20) intron (NM_020890, intron 1 of 20) 3129 NM_020890 57650 Hs.591308 NM_020890 ENSG00000163507 CIP2A KIAA1524|p90 cell proliferation regulating inhibitor of protein phosphatase 2A protein-coding chr14-4496 chr14 37360115 37360325 + 4.36 0.000 intron (NM_138731, intron 10 of 13) L1PA6|LINE|L1 162283 NM_138731 145282 Hs.660396 NM_138731 ENSG00000151338 MIPOL1 CCDC193 mirror-image polydactyly 1 protein-coding chr1-6129 chr1 160933331 160933541 + 4.36 0.000 intron (NR_110695, intron 2 of 5) SVA_B|Retroposon|SVA 971 NR_110695 101928372 NR_110695 ENSG00000198358 LOC101928372 - uncharacterized LOC101928372 ncRNA chr3-7192 chr3 189589256 189589466 + 4.36 0.000 Intergenic Intergenic -7385 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr3-3698 chr3 163503555 163503765 + 4.36 0.000 Intergenic AluYh3|SINE|Alu -200359 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr5-7768 chr5 61787997 61788207 + 4.36 0.000 Intergenic Intergenic -52404 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr7-7735 chr7 847907 848117 + 4.36 0.000 intron (NM_025154, intron 5 of 17) intron (NM_025154, intron 5 of 17) 6638 NM_001367708 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr3-7656 chr3 34127209 34127419 + 4.36 0.000 Intergenic AluY|SINE|Alu 328684 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr11-7031 chr11 118770770 118770980 + 4.36 0.000 intron (NM_001257191, intron 4 of 13) AluSx|SINE|Alu 20073 NM_001257191 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr2-12227 chr2 43578475 43578685 + 4.36 0.000 exon (NM_001271643, exon 9 of 18) exon (NM_001271643, exon 9 of 18) 17394 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding chrX-2087 chrX 22240814 22241024 + 4.36 0.000 intron (NR_073010, intron 8 of 11) L1PA7|LINE|L1 -31994 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr10-8437 chr10 86116182 86116392 + 4.36 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 148501 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr15-3880 chr15 93398312 93398522 + 4.36 0.000 Intergenic AluY|SINE|Alu 192351 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr11-9072 chr11 30014670 30014880 + 4.36 0.000 intron (NM_002233, intron 1 of 1) intron (NM_002233, intron 1 of 1) 2255 NM_002233 3739 Hs.592002 NM_002233 ENSG00000182255 KCNA4 HBK4|HK1|HPCN2|HUKII|KCNA4L|KCNA8|KV1.4|MCIDDS|PCN2 potassium voltage-gated channel subfamily A member 4 protein-coding chr2-7723 chr2 34985756 34985966 + 4.36 0.000 Intergenic Intergenic 308304 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr2-14078 chr2 198767974 198768184 + 4.36 0.000 Intergenic Intergenic -392982 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2-11776 chr2 13223234 13223444 + 4.36 0.000 Intergenic Intergenic -216326 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr7-7189 chr7 10472403 10472613 + 4.36 0.000 intron (NR_147499, intron 2 of 2) intron (NR_147499, intron 2 of 2) -230168 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr3-9896 chr3 84000932 84001142 + 4.36 0.000 Intergenic (TATGTA)n|Simple_repeat|Simple_repeat 868538 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr14-3810 chr14 68730781 68730991 + 4.36 0.000 Intergenic Intergenic 63028 NM_004926 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr3-9833 chr3 76074660 76074870 + 4.36 0.000 Intergenic Intergenic -289216 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr5-8243 chr5 110623737 110623947 + 4.36 0.000 intron (NM_001039763, intron 7 of 13) MIR3|SINE|MIR 102829 NM_001039763 642987 Hs.729154 NM_001039763 ENSG00000186952 TMEM232 - transmembrane protein 232 protein-coding chr2-11067 chr2 119607348 119607558 + 4.36 0.000 intron (NR_073132, intron 12 of 24) intron (NR_073132, intron 12 of 24) 63004 NM_001271049 200373 Hs.496753 NM_001029996 ENSG00000163075 CFAP221 FAP221|PCDP1 cilia and flagella associated protein 221 protein-coding chr7-7682 chr7 154256115 154256325 + 4.36 0.000 intron (NM_130797, intron 1 of 25) intron (NM_130797, intron 1 of 25) -48939 NM_001290252 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr1-12551 chr1 28495832 28496042 + 4.36 0.000 intron (NM_023923, intron 12 of 12) intron (NM_023923, intron 12 of 12) -10006 NM_001048199 1104 Hs.469723 NM_001269 ENSG00000180198 RCC1 CHC1|RCC1-I|SNHG3-RCC1 regulator of chromosome condensation 1 protein-coding chr5-3681 chr5 176839699 176839909 + 4.36 0.000 intron (NM_133369, intron 1 of 14) intron (NM_133369, intron 1 of 14) 29245 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 netrin receptor A protein-coding chr19-6617 chr19 29737863 29738073 + 4.36 0.000 Intergenic Intergenic -22179 NM_001256047 83636 Hs.529094 NM_031448 ENSG00000131943 C19orf12 MPAN|NBIA3|NBIA4|SPG43 chromosome 19 open reading frame 12 protein-coding chr4-6559 chr4 183550319 183550529 + 4.36 0.000 Intergenic Intergenic 44342 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr2-8010 chr2 68925434 68925644 + 4.36 0.000 Intergenic Intergenic 27354 NM_182536 200504 Hs.16757 NM_182536 ENSG00000183607 GKN2 BRICD1B|GDDR|PRO813|TFIZ1|VLTI465 gastrokine 2 protein-coding chr8-5123 chr8 68076517 68076727 + 4.36 0.000 intron (NM_024870, intron 14 of 39) intron (NM_024870, intron 14 of 39) 124576 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding chr10-5245 chr10 66244387 66244597 + 4.36 0.000 intron (NM_001127384, intron 13 of 17) L1MA2|LINE|L1 673067 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr17-8251 chr17 66398329 66398539 + 4.36 0.000 intron (NR_110822, intron 3 of 3) intron (NR_110822, intron 3 of 3) 18420 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr4-6905 chr4 14831326 14831536 + 4.36 0.000 intron (NR_126435, intron 2 of 6) intron (NR_126435, intron 2 of 6) 56738 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr5-6466 chr5 172130434 172130644 + 4.36 0.000 intron (NM_005990, intron 2 of 18) AluSx1|SINE|Alu 57685 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chrY-16 chrY 1365850 1366060 + 4.36 0.000 intron (NM_002183, intron 9 of 11).2 CpG 26158 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chr11-10291 chr11 105491456 105491666 + 4.36 0.000 Intergenic Intergenic -118512 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr18-2370 chr18 60552357 60552567 + 4.36 0.000 Intergenic Intergenic -179687 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr9-6764 chr9 22527938 22528148 + 4.36 0.000 Intergenic (TTCC)n|Simple_repeat|Simple_repeat 81219 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr2-13566 chr2 155009485 155009695 + 4.36 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 310895 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr1-13034 chr1 165425647 165425857 + 4.36 0.000 promoter-TSS (NM_001256571) promoter-TSS (NM_001256571) -768 NM_001256571 6258 Hs.26550 NM_006917 ENSG00000143171 RXRG NR2B3|RXRC retinoid X receptor gamma protein-coding chr22-2637 chr22 33668607 33668817 + 4.36 0.000 intron (NM_133642, intron 2 of 14) intron (NM_133642, intron 2 of 14) 36208 NR_145833 109616998 NR_145833 ENSG00000253007 SNORA50B - small nucleolar RNA, H/ACA box 50B snoRNA chr19-6522 chr19 18709332 18709542 + 4.36 0.000 intron (NM_015321, intron 1 of 13) intron (NM_015321, intron 1 of 13) 25757 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr5-7169 chr5 4359718 4359928 + 4.36 0.000 Intergenic AluJb|SINE|Alu -413658 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA chr3-10094 chr3 110158632 110158842 + 4.36 0.000 Intergenic Intergenic 555909 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chrX-3790 chrX 135972014 135972224 + 4.36 0.000 intron (NM_001330000, intron 2 of 4) intron (NM_001330000, intron 2 of 4) 1869 NM_001330000 93380 Hs.110702 NM_173470 ENSG00000169446 MMGT1 EMC5|TMEM32 membrane magnesium transporter 1 protein-coding chr6-6327 chr6 48061659 48061869 + 4.36 0.000 intron (NM_207499, intron 1 of 2) intron (NM_207499, intron 1 of 2) 6925 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr10-7867 chr10 47646743 47646953 + 4.36 0.000 Intergenic L3|LINE|CR1 -42852 NR_027634 439965 Hs.283521 NR_027634 SHLD2P3 FAM35B2|FAM35DP shieldin complex subunit 2 pseudogene 3 pseudo chr7-8427 chr7 46793184 46793394 + 4.36 0.000 Intergenic L1MA9|LINE|L1 -96167 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7-8356 chr7 43987310 43987520 + 4.36 0.000 intron (NR_003655, intron 6 of 15) AluSx1|SINE|Alu -13475 NM_175064 285955 Hs.645483 NM_175064 ENSG00000136206 SPDYE1 Ringo1|SPDYB2L2|SPDYE|WBSCR19 speedy/RINGO cell cycle regulator family member E1 protein-coding chr13-2306 chr13 32001865 32002075 + 4.36 0.000 Intergenic Intergenic 29669 NR_103839 100507099 Hs.536364 NR_103839 FRY-AS1 - FRY antisense RNA 1 ncRNA chr12-6053 chr12 112653227 112653437 + 4.36 0.000 intron (NM_001347952, intron 1 of 21) AluSz|SINE|Alu 41844 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chrX-3164 chrX 25050707 25050917 + 4.36 0.000 Intergenic Intergenic -34847 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr8-5092 chr8 48716120 48716330 + 4.36 0.000 non-coding (NR_157026, exon 6 of 6) non-coding (NR_157026, exon 6 of 6) 19043 NR_024605 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr1-14395 chr1 44148513 44148723 + 4.36 0.000 Intergenic Intergenic -6987 NM_001358438 105378952 NM_001358438 ENSG00000283039 KLF18 - Kruppel like factor 18 protein-coding chr15-3887 chr15 96082410 96082620 + 4.24 0.000 non-coding (NR_158193, exon 8 of 8) non-coding (NR_158193, exon 8 of 8) 45326 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr6-5208 chr6 132673835 132674045 + 4.24 0.000 Intergenic L1PA16|LINE|L1 -27914 NM_138327 134864 Hs.375030 NM_138327 ENSG00000146399 TAAR1 TA1|TAR1|TRAR1 trace amine associated receptor 1 protein-coding chr11-9997 chr11 79330536 79330746 + 4.24 0.000 intron (NM_001098816, intron 1 of 33) MIRb|SINE|MIR 71468 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr3-6304 chr3 75328373 75328583 + 4.24 0.000 Intergenic Intergenic 106637 NR_024241 692099 Hs.591652 NR_024241 ENSG00000244026 FAM86DP FAM86D family with sequence similarity 86 member D, pseudogene pseudo chr5-8981 chr5 162342383 162342593 + 4.24 0.000 Intergenic Intergenic 274846 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding chrX-3804 chrX 140035589 140035799 + 4.24 0.000 Intergenic Intergenic 18426 NR_148935 728660 Hs.460956 NR_148935 ENSG00000233145 LOC728660 - uncharacterized LOC728660 ncRNA chr14-4212 chr14 95665676 95665886 + 4.24 0.000 intron (NR_152604, intron 4 of 7) intron (NR_152604, intron 4 of 7) 13684 NR_028288 27004 Hs.510368 NM_012468 TCL6 TNG1|TNG2 T cell leukemia/lymphoma 6 ncRNA chr7-9014 chr7 100988132 100988342 + 4.24 0.000 intron (NM_001164462, intron 1 of 11) AluSx1|SINE|Alu 18614 NM_001164462 10071 Hs.489355 NM_001164462 ENSG00000205277 MUC12 MUC-11|MUC-12|MUC11 mucin 12, cell surface associated protein-coding chr5-8389 chr5 124462028 124462238 + 4.24 0.000 Intergenic Intergenic -23613 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr7-6902 chr7 73399390 73399600 + 4.24 0.000 Intergenic MER50|LTR|ERV1 -34283 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr20-4087 chr20 39582804 39583014 + 4.24 0.000 Intergenic L1MA3|LINE|L1 -358161 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr10-5095 chr10 47181681 47181891 + 4.24 0.000 Intergenic Intergenic -118411 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr2-9787 chr2 114052594 114052804 + 4.24 0.000 Intergenic Intergenic -72715 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr1-12231 chr1 212831460 212831670 + 4.24 0.000 intron (NM_001024601, intron 2 of 2) intron (NM_001024601, intron 2 of 2) 16084 NM_001024601 149643 Hs.153274 NM_001024601 ENSG00000185523 SPATA45 C1orf227 spermatogenesis associated 45 protein-coding chr3-9749 chr3 69213566 69213776 + 4.24 0.000 intron (NM_015123, intron 11 of 22) AluJr|SINE|Alu -91076 NM_198271 56203 Hs.350621 NM_198271 ENSG00000163380 LMOD3 NEM10 leiomodin 3 protein-coding chr3-7160 chr3 186355365 186355575 + 4.24 0.000 intron (NM_001346, intron 1 of 24) (CCA)n|Simple_repeat|Simple_repeat 6764 NM_001346 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr5-7692 chr5 55982626 55982836 + 4.24 0.000 non-coding (NR_120480, exon 2 of 18) non-coding (NR_120480, exon 2 of 18) 12232 NR_120480 3572 Hs.532082 NM_002184 ENSG00000134352 IL6ST CD130|CDW130|GP130|IL-6RB interleukin 6 signal transducer protein-coding chr14-5056 chr14 82413140 82413350 + 4.24 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -229387 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr13-4335 chr13 102179121 102179331 + 4.24 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) 131460 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr22-2937 chr22 47394090 47394300 + 4.24 0.000 Intergenic Intergenic 48624 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr2-13098 chr2 112822730 112822940 + 4.24 0.000 Intergenic L2a|LINE|L2 13944 NM_000576 3553 Hs.126256 NM_000576 ENSG00000125538 IL1B IL-1|IL1-BETA|IL1F2 interleukin 1 beta protein-coding chr16-6391 chr16 53625433 53625643 + 4.24 0.000 intron (NM_001330538, intron 21 of 25) SVA_A|Retroposon|SVA 78321 NM_001328422 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding chr1-14386 chr1 43751571 43751781 + 4.24 0.000 intron (NM_001270465, intron 2 of 7) intron (NM_001270465, intron 2 of 7) -24333 NR_125986 101929592 NR_125986 ENSG00000229444 LOC101929592 - uncharacterized LOC101929592 ncRNA chrX-4087 chrX 23318146 23318356 + 4.24 0.000 Intergenic Intergenic -16598 NM_173495 139411 Hs.319503 NM_173495 ENSG00000165186 PTCHD1 AUTSX4 patched domain containing 1 protein-coding chr18-3564 chr18 78216273 78216483 + 4.24 0.000 Intergenic Intergenic -222651 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr11-7591 chr11 39093774 39093984 + 4.24 0.000 Intergenic Intergenic 445021 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr18-1914 chr18 33428683 33428893 + 4.24 0.000 intron (NM_001308126, intron 2 of 23) intron (NM_001308126, intron 2 of 23) 11783 NM_001371121 chr5-7261 chr5 12384103 12384313 + 4.24 0.000 Intergenic L1PA14|LINE|L1 -190649 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA chr5-6627 chr5 41689664 41689874 + 4.24 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 153888 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chrX-4255 chrX 39731020 39731230 + 4.24 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 69909 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr4-5460 chr4 44203405 44203615 + 4.24 0.000 intron (NM_198353, intron 1 of 1) AluSq2|SINE|Alu 186448 NR_131958 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr14-3737 chr14 35535283 35535493 + 4.24 0.000 exon (NM_032594, exon 1 of 1) exon (NM_032594, exon 1 of 1) 1224 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding chr11-7792 chr11 96258512 96258722 + 4.24 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -82821 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chrX-5039 chrX 122094548 122094758 + 4.24 0.000 Intergenic L1M1|LINE|L1 723681 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr2-10300 chr2 136434063 136434273 + 4.24 0.000 Intergenic Intergenic -316013 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr3-10593 chr3 143375488 143375698 + 4.24 0.000 intron (NM_173653, intron 13 of 15) MLT1H|LTR|ERVL-MaLR 33347 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr11-2790 chr11 78098488 78098698 + 4.24 0.000 Intergenic AluJb|SINE|Alu -18731 NM_001203262 100532726 Hs.407860 NM_001203260 ENSG00000259112 NDUFC2-KCTD14 - NDUFC2-KCTD14 readthrough protein-coding chr11-2961 chr11 76956584 76956794 + 4.24 0.000 intron (NM_001300955, intron 2 of 9) intron (NM_001300955, intron 2 of 9) -77709 NM_138706 192134 Hs.352622 NM_138706 ENSG00000198488 B3GNT6 B3Gn-T6|BGnT-6|beta-1,3-Gn-T6|beta3Gn-T6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 protein-coding chr21-1784 chr21 37760236 37760446 + 4.24 0.000 intron (NM_002240, intron 2 of 3) MIR|SINE|MIR 156116 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr3-9840 chr3 78221803 78222013 + 4.24 0.000 Intergenic MamGypLTR3a|LTR|Gypsy -172945 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chrX-926 chrX 23834281 23834491 + 4.24 0.000 intron (NM_024122, intron 8 of 8) AluSx1|SINE|Alu 51228 NM_002970 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr4-8484 chr4 159392471 159392681 + 4.24 0.000 Intergenic AluY|SINE|Alu 124767 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr4-7112 chr4 35009295 35009505 + 4.24 0.000 Intergenic L1ME2|LINE|L1 -739653 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr12-7306 chr12 53989069 53989279 + 4.24 0.000 exon (NM_017409, exon 2 of 2) exon (NM_017409, exon 2 of 2) -2564 NR_029617 406973 NR_029617 ENSG00000207924 MIR196A2 MIRN196-2|MIRN196A2|mir-196a-2 microRNA 196a-2 ncRNA chrX-2961 chrX 9316820 9317030 + 4.24 0.000 Intergenic Intergenic -146370 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr21-1544 chr21 5096500 5096710 + 4.24 0.000 Intergenic Intergenic -5455 NR_146631 105377138 NR_146631 LINC01678 - long intergenic non-protein coding RNA 1678 ncRNA chr18-2592 chr18 14321260 14321470 + 4.24 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR -16058 NR_026756 284233 Hs.607579 NR_026756 ENSG00000265787 CYP4F35P - cytochrome P450 family 4 subfamily F member 35, pseudogene pseudo chr8-3258 chr8 144557446 144557656 + 4.24 0.000 intron (NM_025251, intron 2 of 10) intron (NM_025251, intron 2 of 10) -28440 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr3-9011 chr3 18971715 18971925 + 4.24 0.000 Intergenic L1MA3|LINE|L1 -176690 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chrX-4614 chrX 75200918 75201128 + 4.24 0.000 intron (NM_001363821, intron 3 of 9) intron (NM_001363821, intron 3 of 9) 44654 NM_001363821 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chr15-1793 chr15 81143503 81143713 + 4.24 0.000 intron (NM_173528, intron 4 of 6) intron (NM_173528, intron 4 of 6) 9338 NM_001353365 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chrX-1577 chrX 71911020 71911230 + 4.24 0.000 promoter-TSS (NM_001013627) promoter-TSS (NM_001013627) 37 NM_001013627 340527 Hs.397836 NM_001013627 ENSG00000204131 NHSL2 - NHS like 2 protein-coding chr6-6688 chr6 168083654 168083864 + 4.24 0.000 Intergenic Intergenic -2202 NR_110312 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr15-4143 chr15 85832545 85832755 + 4.24 0.000 Intergenic Intergenic 7015 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr7-8169 chr7 29988114 29988324 + 4.24 0.000 intron (NM_001145514, intron 1 of 7) intron (NM_001145514, intron 1 of 7) 1582 NM_014766 9805 Hs.520740 NM_014766 ENSG00000136193 SCRN1 SES1 secernin 1 protein-coding chrX-2352 chrX 65526584 65526794 + 4.24 0.000 intron (NM_001170650, intron 6 of 11) intron (NM_001170650, intron 6 of 11) 8117 NM_001170650 81887 Hs.522675 NM_031206 ENSG00000001497 LAS1L Las1-like|WTS|dJ475B7.2 LAS1 like, ribosome biogenesis factor protein-coding chr1-16111 chr1 204373008 204373218 + 4.24 0.000 Intergenic AluSz|SINE|Alu -3394 NR_027022 127841 Hs.213144 NR_027022 ENSG00000280924 LINC00628 - long intergenic non-protein coding RNA 628 ncRNA chr2-10048 chr2 33870439 33870649 + 4.24 0.000 intron (NR_126403, intron 2 of 5) AluSg|SINE|Alu -142327 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr6-8137 chr6 129421782 129421992 + 4.24 0.000 intron (NM_000426, intron 40 of 64) intron (NM_000426, intron 40 of 64) 288290 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr18-2630 chr18 36930383 36930593 + 4.24 0.000 intron (NM_001353918, intron 5 of 9) intron (NM_001353918, intron 5 of 9) -6674 NR_134585 105372069 Hs.666765 NR_134585 ENSG00000267039 LOC105372069 - uncharacterized LOC105372069 ncRNA chr13-2944 chr13 38738512 38738722 + 4.24 0.000 intron (NM_207361, intron 2 of 23) L2|LINE|L2 51540 NM_207361 341640 Hs.253994 NM_207361 ENSG00000150893 FREM2 CRYPTOP|FRASRS2 FRAS1 related extracellular matrix 2 protein-coding chr12-7072 chr12 42207043 42207253 + 4.24 0.000 intron (NM_001320080, intron 2 of 4) intron (NM_001320080, intron 2 of 4) 31220 NR_135140 10138 Hs.649195 NM_005748 ENSG00000015153 YAF2 - YY1 associated factor 2 protein-coding chr3-4732 chr3 69515195 69515405 + 4.24 0.000 Intergenic MSTA|LTR|ERVL-MaLR -129212 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr2-12480 chr2 61744232 61744442 + 4.24 0.000 Intergenic AluJb|SINE|Alu 109723 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr19-6597 chr19 28291104 28291314 + 4.24 0.000 Intergenic Intergenic -315479 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr8-6697 chr8 83402982 83403192 + 4.24 0.000 promoter-TSS (NR_122034) promoter-TSS (NR_122034) -671 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA chr11-4742 chr11 80218485 80218695 + 4.24 0.000 Intergenic L1MA5|LINE|L1 544213 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr1-15797 chr1 176702740 176702950 + 4.24 0.000 intron (NM_020318, intron 9 of 22) intron (NM_020318, intron 9 of 22) 239670 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr20-3616 chr20 6370146 6370356 + 4.24 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -56481 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA chrX-1618 chrX 112384175 112384385 + 4.24 0.000 intron (NM_001004308, intron 2 of 2) L1P3|LINE|L1 295658 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr1-15004 chr1 92150799 92151009 + 4.24 0.000 Intergenic MER6|DNA|TcMar-Tigger -18020 NM_015237 23285 Hs.21554 NM_015237 ENSG00000189195 KIAA1107 - KIAA1107 protein-coding chr2-9233 chr2 218615587 218615797 + 4.24 0.000 intron (NM_032726, intron 1 of 15) intron (NM_032726, intron 1 of 15) 7793 NM_032726 84812 Hs.632528 NM_032726 ENSG00000115556 PLCD4 - phospholipase C delta 4 protein-coding chr5-2791 chr5 181217952 181218162 + 4.24 0.000 Intergenic Intergenic 4576 NR_039781 100616342 NR_039781 ENSG00000264732 MIR4638 mir-4638 microRNA 4638 ncRNA chr22-2316 chr22 38638571 38638781 + 4.24 0.000 intron (NM_001013647, intron 5 of 16) intron (NM_001013647, intron 5 of 16) 17716 NM_001013647 646851 Hs.542707 NM_001013647 ENSG00000184949 FAM227A - family with sequence similarity 227 member A protein-coding chr7-8833 chr7 85904064 85904274 + 4.24 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 483047 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr5-9147 chr5 176685957 176686167 + 4.24 0.000 Intergenic L1MEf|LINE|L1 38578 NM_001366492 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr1-12826 chr1 88464016 88464226 + 4.24 0.000 Intergenic Intergenic -220023 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr8-5886 chr8 15881305 15881515 + 4.24 0.000 Intergenic Intergenic 304862 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr5-7937 chr5 79528678 79528888 + 4.24 0.000 Intergenic Intergenic -14649 NM_004272 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr8-6733 chr8 87459481 87459691 + 4.24 0.000 Intergenic Intergenic 414429 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding chr1-11973 chr1 82854774 82854984 + 4.24 0.000 Intergenic L1PA7|LINE|L1 -48304 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr8-7106 chr8 118881555 118881765 + 4.24 0.000 Intergenic Intergenic 70225 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding chr11-5684 chr11 134308505 134308715 + 4.24 0.000 intron (NM_001080407, intron 10 of 19) (CCA)n|Simple_repeat|Simple_repeat -23264 NM_138342 89944 Hs.436178 NM_138342 ENSG00000149328 GLB1L2 MST114|MSTP114 galactosidase beta 1 like 2 protein-coding chr13-3638 chr13 31079351 31079561 + 4.24 0.000 Intergenic Intergenic 82448 NM_006644 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr10-8553 chr10 93719313 93719523 + 4.24 0.000 Intergenic L2c|LINE|L2 -16459 NM_001347714 118924 Hs.586650 NM_145246 ENSG00000148690 FRA10AC1 C10orf4|F26C11.1-like|FRA10A FRA10A associated CGG repeat 1 protein-coding chr3-4457 chr3 45243987 45244197 + 4.24 0.000 Intergenic Intergenic -17805 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr14-3749 chr14 41671585 41671795 + 4.24 0.000 intron (NM_001346173, intron 1 of 4) AluSq2|SINE|Alu 64834 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr16-6289 chr16 31822230 31822440 + 4.24 0.000 Intergenic AluSx1|SINE|Alu -13482 NM_174980 317702 Hs.257746 NM_174980 VN1R3 FKSG46|V1RL3|V1RL3p vomeronasal 1 receptor 3 (gene/pseudogene) protein-coding chrX-4423 chrX 53931012 53931222 + 4.24 0.000 Intergenic Intergenic 112030 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr6-7143 chr6 36182104 36182314 + 4.24 0.000 Intergenic AluJo|SINE|Alu -14535 NM_015695 27154 Hs.520096 NM_015695 ENSG00000096070 BRPF3 - bromodomain and PHD finger containing 3 protein-coding chr1-16693 chr1 245190342 245190552 + 4.24 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) 35462 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr4-8688 chr4 180977043 180977253 + 4.24 0.000 Intergenic Intergenic 182001 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr9-7395 chr9 19594855 19595065 + 4.24 0.000 intron (NM_001193288, intron 3 of 8) intron (NM_001193288, intron 3 of 8) 185951 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr3-4867 chr3 167190280 167190490 + 4.24 0.000 Intergenic AluY|SINE|Alu 189898 NM_001199202 79740 Hs.478143 NM_024687 ENSG00000169064 ZBBX - zinc finger B-box domain containing protein-coding chr5-5146 chr5 106875244 106875454 + 4.24 0.000 intron (NR_104671, intron 2 of 3) HERVL18-int|LTR|ERVL 135665 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr7-9040 chr7 101985798 101986008 + 4.24 0.000 intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 168277 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr6-6784 chr6 4029339 4029549 + 4.24 0.000 intron (NR_146785, intron 1 of 20) AluJb|SINE|Alu 8144 NM_003913 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr6-7444 chr6 54953453 54953663 + 4.24 0.000 Intergenic Intergenic 106787 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding chr17-6250 chr17 28445568 28445778 + 4.24 0.000 Intergenic AluJr|SINE|Alu -27971 NM_001145975 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr8-5408 chr8 27921642 27921852 + 4.24 0.000 exon (NM_173833, exon 4 of 9) exon (NM_173833, exon 4 of 9) -35631 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr7-7381 chr7 66804000 66804210 + 4.24 0.000 intron (NR_160287, intron 8 of 9) AluJo|SINE|Alu 40721 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseudogene 1 pseudo chr1-14666 chr1 60031248 60031458 + 4.24 0.000 intron (NM_152377, intron 7 of 11) intron (NM_152377, intron 7 of 11) 42417 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr17-7492 chr17 16428153 16428363 + 4.24 0.000 intron (NM_016113, intron 8 of 14) intron (NM_016113, intron 8 of 14) -10729 NR_027170 125144 Hs.368934 NM_152350 ENSG00000175061 SNHG29 C17orf45|C17orf76-AS1|FAM211A-AS1|LRRC75A-AS1|NCRNA00188|TSAP19 small nucleolar RNA host gene 29 ncRNA chr12-7011 chr12 31953926 31954136 + 4.24 0.000 Intergenic Intergenic -5384 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 RESF1 C12orf35|GET|KIAA1551|UTA2-1 retroelement silencing factor 1 protein-coding chr2-11634 chr2 5311900 5312110 + 4.24 0.000 Intergenic Intergenic 379113 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr1-14857 chr1 78608293 78608503 + 4.24 0.000 Intergenic L1PA6|LINE|L1 -12050 NM_006820 10964 Hs.744918 NM_006820 ENSG00000137959 IFI44L C1orf29|GS3686 interferon induced protein 44 like protein-coding chr5-3334 chr5 133520880 133521090 + 4.24 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) 91556 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr14-4159 chr14 76852391 76852601 + 4.24 0.000 intron (NM_194287, intron 8 of 13) intron (NM_194287, intron 8 of 13) 26088 NM_194287 145497 Hs.147276 NM_194287 ENSG00000100565 LRRC74A C14orf166B|LRRC74 leucine rich repeat containing 74A protein-coding chrX-2760 chrX 129961238 129961448 + 4.24 0.000 Intergenic Intergenic -43845 NM_001184772 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr2-12512 chr2 64373440 64373650 + 4.24 0.000 Intergenic L2a|LINE|L2 -32697 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr6-5666 chr6 99781934 99782144 + 4.24 0.000 Intergenic Intergenic 175265 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr10-6185 chr10 21298982 21299192 + 4.24 0.000 Intergenic AluJo|SINE|Alu 73863 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr18-3344 chr18 57321794 57322004 + 4.24 0.000 Intergenic Intergenic -30658 NM_015879 51046 Hs.23172 NM_015879 ENSG00000177511 ST8SIA3 SIAT8C|ST8SiaIII ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 protein-coding chr11-7306 chr11 47436502 47436712 + 4.24 0.000 Intergenic AluSz6|SINE|Alu -10134 NM_002804 5702 Hs.250758 NM_002804 ENSG00000165916 PSMC3 TBP1 proteasome 26S subunit, ATPase 3 protein-coding chr4-6001 chr4 188555300 188555510 + 4.24 0.000 intron (NR_033869, intron 4 of 4) L2a|LINE|L2 99827 NR_033869 401164 Hs.435756 NR_033869 ENSG00000249378 LINC01060 - long intergenic non-protein coding RNA 1060 ncRNA chr12-3431 chr12 111316357 111316567 + 4.24 0.000 intron (NM_015267, intron 16 of 21) AluSz|SINE|Alu 12320 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr5-6222 chr5 78138870 78139080 + 4.24 0.000 intron (NM_003664, intron 15 of 26) AluSz|SINE|Alu 155723 NM_001271769 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding chr7-6539 chr7 45924393 45924603 + 4.24 0.000 Intergenic Intergenic -3226 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr19-7058 chr19 52722512 52722722 + 4.24 0.000 intron (NM_030972, intron 3 of 6) intron (NM_030972, intron 3 of 6) 7265 NM_030972 81856 Hs.143951 NM_030972 ENSG00000213020 ZNF611 - zinc finger protein 611 protein-coding chr3-8274 chr3 53001768 53001978 + 4.24 0.000 intron (NM_016329, intron 1 of 20) AluJb|SINE|Alu 44200 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr8-4629 chr8 133097871 133098081 + 4.24 0.000 intron (NM_003235, intron 43 of 47) intron (NM_003235, intron 43 of 47) 4626 NM_001282965 6503 Hs.75367 NM_006748 ENSG00000155926 SLA SLA1|SLAP Src like adaptor protein-coding chr9-7397 chr9 19786285 19786495 + 4.24 0.000 exon (NM_001193288, exon 1 of 9) exon (NM_001193288, exon 1 of 9) 629 NM_001193288 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr1-14483 chr1 48288630 48288840 + 4.24 0.000 Intergenic L1P2|LINE|L1 66019 NM_001135181 200010 Hs.37890 NM_001011547 ENSG00000117834 SLC5A9 SGLT4 solute carrier family 5 member 9 protein-coding chr4-4377 chr4 40531494 40531704 + 4.24 0.000 intron (NM_001098634, intron 2 of 6) intron (NM_001098634, intron 2 of 6) -15614 NM_019027 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr5-7989 chr5 84732732 84732942 + 4.24 0.000 Intergenic THE1D|LTR|ERVL-MaLR -347957 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr3-9934 chr3 88865337 88865547 + 4.24 0.000 Intergenic AluYk3|SINE|Alu -242179 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr1-12903 chr1 113238467 113238677 + 4.24 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -32319 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr19-6401 chr19 13461989 13462199 + 4.24 0.000 intron (NM_023035, intron 1 of 46) intron (NM_023035, intron 1 of 46) 44366 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr6-5784 chr6 2162728 2162938 + 4.24 0.000 intron (NM_001500, intron 1 of 10) intron (NM_001500, intron 1 of 10) 13158 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr13-4180 chr13 89309463 89309673 + 4.24 0.000 Intergenic L2|LINE|L2 -72678 NR_131229 105616982 Hs.564527 NR_131229 ENSG00000232225 LINC01047 - long intergenic non-protein coding RNA 1047 ncRNA chr7-8620 chr7 69192169 69192379 + 4.24 0.000 Intergenic Intergenic 405350 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr1-15312 chr1 118589686 118589896 + 4.24 0.000 Intergenic Intergenic 398552 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr1-15998 chr1 197327497 197327707 + 4.24 0.000 intron (NM_001257965, intron 3 of 14) intron (NM_001257965, intron 3 of 14) 59350 NM_001193640 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr11-10001 chr11 79500022 79500232 + 4.24 0.000 Intergenic SVA_B|Retroposon|SVA -59097 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr14-4055 chr14 57595537 57595747 + 4.24 0.000 intron (NM_001306087, intron 1 of 7) L1MC3|LINE|L1 -101785 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr3-10986 chr3 178771246 178771456 + 4.24 0.000 intron (NR_126560, intron 2 of 7) L2a|LINE|L2 89054 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr14-2541 chr14 22373622 22373832 + 4.24 0.000 Intergenic Intergenic 59026 NR_148364 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr16-6277 chr16 31327009 31327219 + 4.24 0.000 intron (NM_001145808, intron 22 of 29) L2b|LINE|L2 -28062 NM_001286375 3687 Hs.248472 NM_000887 ENSG00000140678 ITGAX CD11C|SLEB6 integrin subunit alpha X protein-coding chr3-6513 chr3 113890135 113890345 + 4.24 0.000 intron (NM_017577, intron 6 of 17) intron (NM_017577, intron 6 of 17) -7260 NM_001172105 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr4-6098 chr4 11918599 11918809 + 4.24 0.000 Intergenic LTR12C|LTR|ERV1 135526 NR_162127 113218507 NR_162127 MIR12113 - microRNA 12113 ncRNA chr7-5825 chr7 83961273 83961483 + 4.24 0.000 exon (NM_006080, exon 17 of 17) exon (NM_006080, exon 17 of 17) 233411 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr4-7637 chr4 83548555 83548765 + 4.24 0.000 intron (NM_001256421, intron 3 of 12) intron (NM_001256421, intron 3 of 12) 12552 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr15-4134 chr15 84102827 84103037 + 4.24 0.000 intron (NR_036652, intron 5 of 9) intron (NR_036652, intron 5 of 9) 22745 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr5-6366 chr5 138867173 138867383 + 4.24 0.000 intron (NM_001323985, intron 7 of 17) intron (NM_001323985, intron 7 of 17) -7952 NM_001324000 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr12-5777 chr12 6063248 6063458 + 4.24 0.000 intron (NM_000552, intron 12 of 51) intron (NM_000552, intron 12 of 51) -23170 NR_145989 109729112 NR_145989 SNORA120 - small nucleolar RNA, H/ACA box 120 snoRNA chr6-6063 chr6 136658092 136658302 + 4.24 0.000 intron (NM_005923, intron 9 of 29) intron (NM_005923, intron 9 of 29) 29083 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr14-2576 chr14 41814115 41814325 + 4.24 0.000 intron (NM_001330106, intron 2 of 4) L1PA8A|LINE|L1 207364 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr20-2265 chr20 3109247 3109457 + 4.24 0.000 3' UTR (NM_014948, exon 5 of 5) 3' UTR (NM_014948, exon 5 of 5) 2441 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chr8-2879 chr8 141117079 141117289 + 4.24 0.000 Intergenic Intergenic -11405 NM_001352890 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr16-6849 chr16 82527009 82527219 + 4.24 0.000 Intergenic Intergenic -99855 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr20-4425 chr20 60298794 60299004 + 4.24 0.000 intron (NR_046099, intron 3 of 4) intron (NR_046099, intron 3 of 4) -9575 NR_030376 693231 NR_030376 ENSG00000207802 MIR646 MIRN646|hsa-mir-646 microRNA 646 ncRNA chr1-4189 chr1 48192707 48192917 + 4.24 0.000 Intergenic SVA_F|Retroposon|SVA -10384 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo chr1-13695 chr1 13724389 13724599 + 4.24 0.000 intron (NM_012231, intron 2 of 9) intron (NM_012231, intron 2 of 9) 19639 NM_015866 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr1-12804 chr1 84988634 84988844 + 4.24 0.000 intron (NM_001330647, intron 1 of 14) L2a|LINE|L2 8374 NM_001330647 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr2-10393 chr2 180167837 180168047 + 4.24 0.000 Intergenic L3|LINE|CR1 -160645 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr11-9945 chr11 76343116 76343326 + 4.24 0.000 Intergenic AluSq|SINE|Alu 37744 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr20-3470 chr20 56234963 56235173 + 4.24 0.000 Intergenic Intergenic -13664 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding chr12-7054 chr12 40712504 40712714 + 4.24 0.000 intron (NM_001256063, intron 1 of 15) intron (NM_001256063, intron 1 of 15) 20167 NM_001256063 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr1-8220 chr1 26164277 26164487 + 4.24 0.000 TTS (NM_024869) TTS (NM_024869) 4200 NM_001364669 110806296 NM_001364667 ENSG00000282872 C1orf232 - chromosome 1 open reading frame 230 protein-coding chr4-8315 chr4 144860598 144860808 + 4.24 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 214547 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr3-7906 chr3 136396064 136396274 + 4.24 0.000 intron (NM_005862, intron 22 of 33) AluSx|SINE|Alu 145829 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr4-6966 chr4 20530861 20531071 + 4.24 0.000 intron (NM_001289135, intron 15 of 35) L1MB7|LINE|L1 2691 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr11-9411 chr11 58292799 58293009 + 4.24 0.000 Intergenic AluJr|SINE|Alu -24644 NM_207374 81341 Hs.531507 NM_207374 ENSG00000172772 OR10W1 OR10W1P|OR10W1Q|OR11-236|UNQ6469 olfactory receptor family 10 subfamily W member 1 protein-coding chr4-6234 chr4 62187118 62187328 + 4.24 0.000 Intergenic AluY|SINE|Alu -25458 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr20-2577 chr20 37560880 37561090 + 4.24 0.000 Intergenic MER41C|LTR|ERV1 -33054 NM_001167820 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr4-7490 chr4 72452557 72452767 + 4.24 0.000 intron (NM_014243, intron 3 of 21) intron (NM_014243, intron 3 of 21) 116559 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr17-4274 chr17 67609066 67609276 + 4.24 0.000 intron (NM_181671, intron 5 of 9) intron (NM_181671, intron 5 of 9) -108662 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr12-5615 chr12 54008799 54009009 + 4.24 0.000 promoter-TSS (NM_022658) promoter-TSS (NM_022658) -81 NM_022658 3224 Hs.664500 NM_022658 ENSG00000037965 HOXC8 HOX3|HOX3A homeobox C8 protein-coding chr9-4869 chr9 3032061 3032271 + 4.24 0.000 Intergenic AluJo|SINE|Alu -149423 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA chr1-11538 chr1 167420530 167420740 + 4.24 0.000 non-coding (NR_037163, exon 17 of 17) non-coding (NR_037163, exon 17 of 17) 91565 NM_001198783 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chr11-8095 chr11 41731239 41731449 + 4.24 0.000 intron (NR_120584, intron 1 of 5) L1MA5|LINE|L1 16776 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA chr20-3778 chr20 20977637 20977847 + 4.24 0.000 Intergenic AluSg|SINE|Alu 128616 NR_147212 105372556 Hs.371339 NR_147212 ENSG00000225127 LINC00237 NCRNA00237 long intergenic non-protein coding RNA 237 ncRNA chr20-4296 chr20 50771579 50771789 + 4.24 0.000 Intergenic Intergenic -23210 NM_001010974 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr3-5834 chr3 31876526 31876736 + 4.24 0.000 intron (NM_001174060, intron 2 of 10) intron (NM_001174060, intron 2 of 10) -105119 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr1-15300 chr1 117067868 117068078 + 4.24 0.000 intron (NM_003594, intron 3 of 22) intron (NM_003594, intron 3 of 22) 7647 NM_003594 8458 Hs.32333 NM_003594 ENSG00000116830 TTF2 HuF2|ZGRF6 transcription termination factor 2 protein-coding chr2-11440 chr2 224597641 224597851 + 4.24 0.000 Intergenic Intergenic -12349 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr12-4095 chr12 56556261 56556471 + 4.24 0.000 intron (NM_002898, intron 1 of 13) intron (NM_002898, intron 1 of 13) 34546 NM_002898 5939 Hs.505729 NM_002898 ENSG00000076067 RBMS2 SCR3 RNA binding motif single stranded interacting protein 2 protein-coding chr11-8740 chr11 8266887 8267097 + 4.24 0.000 intron (NM_001270428, intron 1 of 3) intron (NM_001270428, intron 1 of 3) 1795 NM_001270428 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr2-11377 chr2 212099777 212099987 + 4.24 0.000 intron (NM_001042599, intron 2 of 26) intron (NM_001042599, intron 2 of 26) 326478 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr10-7462 chr10 8440031 8440241 + 4.24 0.000 Intergenic MLT2C1|LTR|ERVL 154255 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 - uncharacterized LOC105376398 ncRNA chr16-3902 chr16 77591211 77591421 + 4.24 0.000 Intergenic AluSq|SINE|Alu -131176 NM_001243661 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr13-4318 chr13 100851944 100852154 + 4.24 0.000 intron (NR_047687, intron 2 of 7) intron (NR_047687, intron 2 of 7) 92315 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr2-7683 chr2 30211749 30211959 + 4.24 0.000 Intergenic Intergenic -19680 NM_030915 81606 Hs.567598 NM_030915 ENSG00000213626 LBH - LBH regulator of WNT signaling pathway protein-coding chr4-6551 chr4 180983328 180983538 + 4.24 0.000 Intergenic Intergenic 175716 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr10-6501 chr10 59289009 59289219 + 4.24 0.000 intron (NM_001347852, intron 5 of 12) MER1B|DNA|hAT-Charlie 73435 NM_198215 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr18-1132 chr18 5295372 5295582 + 4.24 0.000 intron (NM_001243704, intron 1 of 3) CpG 249 NM_001243702 7541 Hs.592340 NM_003409 ENSG00000198081 ZBTB14 ZF5|ZFP-161|ZFP-5|ZFP161|ZNF478 zinc finger and BTB domain containing 14 protein-coding chr1-12858 chr1 102542012 102542222 + 4.24 0.000 Intergenic Intergenic -544883 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr1-16333 chr1 217948626 217948836 + 4.24 0.000 Intergenic Intergenic 55831 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chr19-6392 chr19 13188563 13188773 + 4.24 0.000 Intergenic AluY|SINE|Alu 38257 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr11-9892 chr11 74598737 74598947 + 4.24 0.000 intron (NR_046409, intron 2 of 10) MLT1G|LTR|ERVL-MaLR 6260 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr11-8320 chr11 76060832 76061042 + 4.24 0.000 intron (NM_003369, intron 12 of 14) LTR12C|LTR|ERV1 145565 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr2-13838 chr2 176687795 176688005 + 4.24 0.000 Intergenic Intergenic 50146 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr5-8752 chr5 146928312 146928522 + 4.24 0.000 intron (NM_001271900, intron 2 of 10) L2a|LINE|L2 -8911 NR_047115 100874361 Hs.193825 NR_047115 ENSG00000249553 PPP2R2B-IT1 - PPP2R2B intronic transcript 1 ncRNA chr3-9888 chr3 82485456 82485666 + 4.24 0.000 Intergenic L1MA3|LINE|L1 499419 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr5-9049 chr5 170063091 170063301 + 4.24 0.000 intron (NR_156756, intron 45 of 52) L1M3de|LINE|L1 34708 NR_039609 100616498 NR_039609 ENSG00000263831 MIR378E mir-378e microRNA 378e ncRNA chr17-6452 chr17 14519176 14519386 + 4.24 0.000 Intergenic AluSc|SINE|Alu 215541 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr21-1329 chr21 16292514 16292724 + 4.24 0.000 intron (NR_027790, intron 4 of 7) L2a|LINE|L2 -7851 NR_145757 109617014 NR_145757 ENSG00000201025 SNORD74B - small nucleolar RNA, C/D box 74B snoRNA chr21-1839 chr21 41506074 41506284 + 4.24 0.000 intron (NM_005656, intron 1 of 13) intron (NM_005656, intron 1 of 13) 1886 NM_001135099 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane serine protease 2 protein-coding chr14-3432 chr14 98262218 98262428 + 4.24 0.000 Intergenic MSTA|LTR|ERVL-MaLR -284199 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr5-5866 chr5 1801609 1801819 + 4.24 0.000 intron (NM_004553, intron 1 of 3) CpG-21911 307 NM_004553 4726 Hs.408257 NM_004553 ENSG00000145494 NDUFS6 CI-13kA|CI-13kD-A|CI13KDA|MC1DN9 NADH:ubiquinone oxidoreductase subunit S6 protein-coding chr3-10179 chr3 118530906 118531116 + 4.24 0.000 intron (NR_135547, intron 3 of 3) MER41B|LTR|ERV1 -110757 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr2-13556 chr2 153939562 153939772 + 4.24 0.000 intron (NM_052917, intron 2 of 12) intron (NM_052917, intron 2 of 12) -4727 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr16-3812 chr16 51762112 51762322 + 4.24 0.000 promoter-TSS (NR_110916) promoter-TSS (NR_110916) -302 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr10-8583 chr10 95979361 95979571 + 4.24 0.000 intron (NM_001349008, intron 17 of 34) L1MEi|LINE|L1 -20625 NM_001159747 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr17-7116 chr17 75531510 75531720 + 4.24 0.000 intron (NM_001015002, intron 1 of 9) intron (NM_001015002, intron 1 of 9) 5913 NM_001015002 3993 Hs.514477 NM_004524 ENSG00000073350 LLGL2 HGL|Hugl-2|LGL2 LLGL scribble cell polarity complex component 2 protein-coding chr3-6078 chr3 52120875 52121085 + 4.24 0.000 intron (NM_015426, intron 9 of 10) intron (NM_015426, intron 9 of 10) 33443 NM_001161580 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr14-5240 chr14 99257465 99257675 + 4.24 0.000 exon (NM_138576, exon 2 of 4) exon (NM_138576, exon 2 of 4) 14627 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr9-6917 chr9 93285009 93285219 + 4.24 0.000 intron (NM_001282394, intron 19 of 29) intron (NM_001282394, intron 19 of 29) 61189 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr10-3173 chr10 84437588 84437798 + 4.24 0.000 intron (NM_018999, intron 5 of 10) intron (NM_018999, intron 5 of 10) 12524 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr10-3034 chr10 117241744 117241954 + 4.24 0.000 intron (NM_003054, intron 2 of 15) CpG-3411 735 NM_003054 6571 Hs.596992 NM_003054 ENSG00000165646 SLC18A2 PKDYS2|SVAT|SVMT|VAT2|VMAT2 solute carrier family 18 member A2 protein-coding chrX-5242 chrX 137197053 137197263 + 4.24 0.000 Intergenic L2b|LINE|L2 -165484 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr11-10222 chr11 98456482 98456692 + 4.24 0.000 Intergenic LTR1A2|LTR|ERV1 -564362 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chrX-4738 chrX 92258695 92258905 + 4.24 0.000 intron (NM_032969, intron 3 of 5) MSTA-int|LTR|ERVL-MaLR 423339 NM_001168362 27328 Hs.655673 NM_014522 ENSG00000102290 PCDH11X PCDH-X|PCDH-Y|PCDH11|PCDH11Y|PCDH22|PCDHX|PPP1R119 protocadherin 11 X-linked protein-coding chr11-10377 chr11 112277484 112277694 + 4.24 0.000 intron (NR_126004, intron 1 of 3) L1ME3Cz|LINE|L1 6840 NR_126004 283140 Hs.651827 NR_126004 ENSG00000250303 LINC02762 - long intergenic non-protein coding RNA 2762 ncRNA chr5-5767 chr5 173201954 173202164 + 4.24 0.000 Intergenic Intergenic 33147 NM_001166175 1482 Hs.54473 NM_004387 ENSG00000183072 NKX2-5 CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3 NK2 homeobox 5 protein-coding chr11-8343 chr11 77706207 77706417 + 4.24 0.000 intron (NM_016578, intron 5 of 15) MIRb|SINE|MIR -68506 NM_001311199 1207 Hs.430733 NM_001293 ENSG00000074201 CLNS1A CLCI|CLNS1B|ICln chloride nucleotide-sensitive channel 1A protein-coding chr3-8540 chr3 143875428 143875638 + 4.24 0.000 Intergenic Intergenic -27065 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr2-12844 chr2 96296360 96296570 + 4.24 0.000 intron (NM_014014, intron 13 of 44) intron (NM_014014, intron 13 of 44) 9081 NM_014014 23020 Hs.246112 NM_014014 ENSG00000144028 SNRNP200 ASCC3L1|BRR2|HELIC2|RP33|U5-200KD small nuclear ribonucleoprotein U5 subunit 200 protein-coding chr8-6200 chr8 35658582 35658792 + 4.24 0.000 intron (NM_001322818, intron 4 of 16) AluY|SINE|Alu 51633 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr1-16650 chr1 240776266 240776476 + 4.24 0.000 intron (NM_001350116, intron 16 of 16) (CCTC)n|Simple_repeat|Simple_repeat -164216 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr1-12020 chr1 101365376 101365586 + 4.24 0.000 intron (NR_126402, intron 4 of 4) intron (NR_126402, intron 4 of 4) 41644 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr17-7937 chr17 44959706 44959916 + 4.24 0.000 3' UTR (NM_006688, exon 2 of 2) 3' UTR (NM_006688, exon 2 of 2) 8492 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr1-16413 chr1 225549782 225549992 + 4.24 0.000 intron (NM_001008493, intron 3 of 14) L2c|LINE|L2 103236 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr4-5741 chr4 55125451 55125661 + 4.24 0.000 promoter-TSS (NM_002253) promoter-TSS (NM_002253) 39 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr2-12662 chr2 74434168 74434378 + 4.24 0.000 intron (NM_001015055, intron 1 of 11) AluSx|SINE|Alu 6310 NM_001015056 6242 Hs.192854 NM_033046 ENSG00000114993 RTKN - rhotekin protein-coding chr5-8079 chr5 95399351 95399561 + 4.24 0.000 intron (NM_152548, intron 3 of 9) intron (NM_152548, intron 3 of 9) 8090 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr1-15391 chr1 151158931 151159141 + 4.24 0.000 TTS (NM_001136543) TTS (NM_001136543) 2387 NM_001204848 100534012 Hs.732060 NM_001204848 ENSG00000163156 TNFAIP8L2-SCNM1 SCNM1 TNFAIP8L2-SCNM1 readthrough protein-coding chr1-13850 chr1 20332971 20333181 + 4.24 0.000 intron (NM_001039500, intron 12 of 21) intron (NM_001039500, intron 12 of 21) 42201 NM_001039500 127731 Hs.205178 NM_144623 ENSG00000158816 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding chr2-10794 chr2 45462494 45462704 + 4.24 0.000 intron (NM_018079, intron 16 of 20) intron (NM_018079, intron 16 of 20) 148668 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr14-4537 chr14 41516880 41517090 + 4.24 0.000 Intergenic HERVH-int|LTR|ERV1 -89871 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr18-2450 chr18 34539311 34539521 + 4.24 0.000 intron (NM_001198945, intron 1 of 10) intron (NM_001198945, intron 1 of 10) 46104 NM_032979 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr7-7649 chr7 143120853 143121063 + 4.24 0.000 intron (NM_001130026, intron 9 of 10) MER4A1_|LTR|ERV1 -11119 NM_002652 5304 Hs.99949 NM_002652 ENSG00000159763 PIP GCDFP-15|GCDFP15|GPIP4 prolactin induced protein protein-coding chr8-4400 chr8 105507990 105508200 + 4.24 0.000 intron (NM_001362837, intron 3 of 7) intron (NM_001362837, intron 3 of 7) 188552 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr7-8304 chr7 40080917 40081127 + 4.24 0.000 intron (NM_003718, intron 11 of 13) L1MC4|LINE|L1 53600 NM_138701 136647 Hs.654989 NM_138701 ENSG00000168303 MPLKIP ABHS|C7orf11|ORF20|TTD4 M-phase specific PLK1 interacting protein protein-coding chr14-5233 chr14 98715868 98716078 + 4.24 0.000 intron (NR_161367, intron 3 of 4) intron (NR_161367, intron 3 of 4) 4360 NR_161368 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr13-3531 chr13 23459344 23459554 + 4.24 0.000 Intergenic Intergenic -10063 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr12-7042 chr12 39396102 39396312 + 4.24 0.000 intron (NM_001173464, intron 1 of 37) LTR38A1|LTR|ERV1 46913 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr5-5868 chr5 2281199 2281409 + 4.24 0.000 Intergenic Intergenic 30897 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr10-2114 chr10 129971716 129971926 + 4.24 0.000 Intergenic CpG-3521 -7547 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr11-8738 chr11 8125945 8126155 + 4.24 0.000 intron (NM_001135109, intron 1 of 1) AluSx1|SINE|Alu 42975 NM_001206672 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr2-12105 chr2 34271029 34271239 + 4.24 0.000 intron (NR_126403, intron 4 of 5) L1MCb|LINE|L1 203908 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA chr5-9135 chr5 175640604 175640814 + 4.24 0.000 Intergenic Intergenic -17362 NR_160284 3274 Hs.247885 NM_022304 ENSG00000113749 HRH2 H2R|HH2R histamine receptor H2 protein-coding chr4-8413 chr4 152441375 152441585 + 4.24 0.000 intron (NM_001349798, intron 2 of 13) intron (NM_001349798, intron 2 of 13) 47936 NR_036092 100422896 NR_036092 ENSG00000264678 MIR3140 mir-3140 microRNA 3140 ncRNA chr15-4242 chr15 33250310 33250520 + 4.24 0.000 Intergenic Intergenic -2860 NR_046005 100652857 Hs.439998 NR_046005 TMCO5B - transmembrane and coiled-coil domains 5B (pseudogene) pseudo chr17-7429 chr17 10803242 10803452 + 4.24 0.000 intron (NR_073458, intron 2 of 3) MIR3|SINE|MIR 752 NR_036581 100289255 Hs.306721 NR_036581 ENSG00000263429 TMEM238L LINC00675 transmembrane protein 238 like ncRNA chr19-6021 chr19 1765450 1765660 + 4.24 0.000 intron (NM_001080488, intron 1 of 1) intron (NM_001080488, intron 1 of 1) 12049 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr4-7889 chr4 105372138 105372348 + 4.24 0.000 intron (NM_176869, intron 10 of 11) MER115|DNA|hAT-Tip100 -19362 NR_126420 104384744 Hs.624109 NR_126420 TET2-AS1 - TET2 antisense RNA 1 ncRNA chr1-12765 chr1 73553485 73553695 + 4.24 0.000 Intergenic MLT2A2|LTR|ERVL -121089 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA chr14-1422 chr14 69447804 69448014 + 4.24 0.000 intron (NM_001252148, intron 3 of 5) AluJo|SINE|Alu -36819 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr4-3793 chr4 107014364 107014574 + 4.24 0.000 intron (NM_014421, intron 1 of 3) L1MA6|LINE|L1 21844 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr17-6862 chr17 27057590 27057800 + 4.24 0.000 Intergenic Intergenic 31546 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr8-5809 chr8 701284 701494 + 4.24 0.000 intron (NR_156467, intron 2 of 5) CpG 29835 NM_207332 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chr3-7643 chr3 30056273 30056483 + 4.24 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -122222 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr2-14404 chr2 221021865 221022075 + 4.24 0.000 Intergenic L2c|LINE|L2 550334 NM_001304537 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr7-4496 chr7 154205599 154205809 + 4.24 0.000 intron (NM_130797, intron 1 of 25) intron (NM_130797, intron 1 of 25) -99455 NM_001290252 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr7-9068 chr7 104341514 104341724 + 4.24 0.000 intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 12963 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding chr1-15208 chr1 110430926 110431136 + 4.24 0.000 Intergenic MIRc|SINE|MIR -20118 NM_032414 84432 Hs.514793 NM_032414 ENSG00000143125 PROK1 EGVEGF|PK1|PRK1 prokineticin 1 protein-coding chr9-7354 chr9 15530619 15530829 + 4.24 0.000 Intergenic AluSz|SINE|Alu -19705 NM_001128217 11168 Hs.658434 NM_021144 ENSG00000164985 PSIP1 DFS70|LEDGF|PAIP|PSIP2|p52|p75 PC4 and SFRS1 interacting protein 1 protein-coding chr9-4175 chr9 21253103 21253313 + 4.24 0.000 Intergenic Intergenic -13203 NM_002172 3448 Hs.93907 NM_002172 ENSG00000228083 IFNA14 IFN-alphaH|LEIF2H interferon alpha 14 protein-coding chr18-2745 chr18 79387097 79387307 + 4.24 0.000 Intergenic AluSg4|SINE|Alu -8728 NM_172388 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr1-8785 chr1 1389642 1389852 + 4.24 0.000 intron (NR_135154, intron 8 of 12) AluY|SINE|Alu 8595 NM_001350497 81669 Hs.515704 NM_030937 ENSG00000221978 CCNL2 ANIA-6B|CCNM|CCNS|HCLA-ISO|HLA-ISO|PCEE|SB138 cyclin L2 protein-coding chr9-8118 chr9 99787458 99787668 + 4.24 0.000 intron (NR_109802, intron 2 of 6) L1MA7|LINE|L1 32326 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr3-7832 chr3 107626472 107626682 + 4.24 0.000 intron (NM_001276286, intron 2 of 16) MLT1F|LTR|ERVL-MaLR 103615 NM_001142568 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chrX-1404 chrX 13942969 13943179 + 4.24 0.000 Intergenic AluSz6|SINE|Alu -4250 NM_001318729 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr8-5506 chr8 59021036 59021246 + 4.24 0.000 intron (NM_014729, intron 1 of 8) intron (NM_014729, intron 1 of 8) 98006 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr4-4289 chr4 26158851 26159061 + 4.24 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -160754 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr6-8325 chr6 145433115 145433325 + 4.24 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 253657 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr15-5208 chr15 95416758 95416968 + 4.24 0.000 Intergenic Intergenic -16230 NR_027133 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA chr13-2764 chr13 98846635 98846845 + 4.24 0.000 intron (NM_001366682, intron 37 of 53) intron (NM_001366682, intron 37 of 53) 14656 NR_046663 100874096 Hs.578066 NR_046663 ENSG00000229918 DOCK9-AS1 - DOCK9 antisense RNA 1 ncRNA chr15-5271 chr15 99166824 99167034 + 4.24 0.000 intron (NR_109947, intron 9 of 12) intron (NR_109947, intron 9 of 12) 61849 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr3-11201 chr3 193837290 193837500 + 4.24 0.000 Intergenic Intergenic 6614 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr7-4809 chr7 94980532 94980742 + 4.24 0.000 intron (NM_017650, intron 2 of 15) MER112|DNA|hAT-Charlie 70739 NM_001166162 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr8-7258 chr8 129420929 129421139 + 4.24 0.000 intron (NR_130920, intron 1 of 3) MIRc|SINE|MIR 63108 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA chr7-7837 chr7 4480142 4480352 + 4.24 0.000 Intergenic Intergenic -202048 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr1-9382 chr1 30706968 30707178 + 4.24 0.000 Intergenic Intergenic -11699 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr13-3907 chr13 54804926 54805136 + 4.24 0.000 Intergenic Intergenic -369423 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr22-3742 chr22 26374400 26374610 + 4.24 0.000 intron (NM_001184773, intron 14 of 16) intron (NM_001184773, intron 14 of 16) -54755 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr2-7161 chr2 202642268 202642478 + 4.24 0.000 intron (NM_173511, intron 1 of 7) intron (NM_173511, intron 1 of 7) 7404 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chr16-5283 chr16 62311346 62311556 + 4.24 0.000 Intergenic AluSz|SINE|Alu -275013 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr13-4373 chr13 107720361 107720571 + 4.24 0.000 intron (NM_001080396, intron 1 of 2) AluSx4|SINE|Alu 114992 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA chr12-6239 chr12 37471951 37472161 + 4.24 0.000 Intergenic Intergenic -844718 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr16-2646 chr16 28007702 28007912 + 4.24 0.000 intron (NM_001109763, intron 1 of 6) AluJb|SINE|Alu 55907 NM_001323901 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr6-7998 chr6 116227391 116227601 + 4.24 0.000 intron (NM_152729, intron 8 of 11) L1MA8|LINE|L1 26579 NM_021648 23270 Hs.284141 NM_021648 ENSG00000187189 TSPYL4 dJ486I3.2 TSPY like 4 protein-coding chr20-2365 chr20 16605658 16605868 + 4.24 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -32315 NM_024704 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr16-6099 chr16 12592889 12593099 + 4.24 0.000 Intergenic L1PA4|LINE|L1 -127327 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr12-4879 chr12 63511262 63511472 + 4.24 0.000 Intergenic AluSz|SINE|Alu 157126 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding chr5-2647 chr5 1327223 1327433 + 4.24 0.000 intron (NM_030782, intron 9 of 16) intron (NM_030782, intron 9 of 16) 17771 NM_030782 81037 Hs.444673 NM_030782 ENSG00000049656 CLPTM1L CRR9 CLPTM1 like protein-coding chr2-9483 chr2 235941772 235941982 + 4.24 0.000 intron (NM_001037131, intron 12 of 17) intron (NM_001037131, intron 12 of 17) 226509 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr14-4072 chr14 63309787 63309997 + 4.24 0.000 Intergenic Intergenic 9043 NM_145171 122876 Hs.375028 NM_145171 ENSG00000179600 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone subunit beta 5 protein-coding chr14-4076 chr14 64155256 64155466 + 4.24 0.000 intron (NM_015180, intron 85 of 114) L1MB8|LINE|L1 -58783 NM_182913 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr14-5205 chr14 95601480 95601690 + 4.24 0.000 Intergenic L2b|LINE|L2 28023 NR_146449 100506999 Hs.112858 NR_146449 ENSG00000258390 LINC02318 - long intergenic non-protein coding RNA 2318 ncRNA chr9-7716 chr9 73093936 73094146 + 4.24 0.000 Intergenic Intergenic -57824 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr2-7530 chr2 21977944 21978154 + 4.24 0.000 Intergenic Intergenic -267397 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr5-9139 chr5 176214678 176214888 + 4.24 0.000 Intergenic SVA_A|Retroposon|SVA -15488 NR_036494 643201 Hs.390285 NR_036494 ENSG00000248596 LOC643201 - centrosomal protein 192kDa pseudogene pseudo chr6-8341 chr6 147554097 147554307 + 4.24 0.000 intron (NM_001030060, intron 1 of 1) THE1C|LTR|ERVL-MaLR 45512 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr14-4877 chr14 71383615 71383825 + 4.24 0.000 intron (NM_001354285, intron 2 of 24) MSTB|LTR|ERVL-MaLR -14617 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA chr14-4849 chr14 69727759 69727969 + 4.24 0.000 Intergenic Intergenic -39278 NM_001039465 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr8-7032 chr8 111729225 111729435 + 4.24 0.000 Intergenic Intergenic 352691 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr14-4548 chr14 43797032 43797242 + 4.24 0.000 Intergenic Intergenic 710146 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr7-6015 chr7 105613982 105614192 + 4.24 0.000 exon (NM_020725, exon 10 of 12) exon (NM_020725, exon 10 of 12) -32545 NM_001355527 100130771 Hs.719432 NM_001355526 ENSG00000185055 EFCAB10 - EF-hand calcium binding domain 10 protein-coding chr7-8893 chr7 92146806 92147016 + 4.24 0.000 intron (NM_001161528, intron 3 of 4) AluSp|SINE|Alu -12166 NM_001146152 1595 Hs.417077 NM_000786 ENSG00000001630 CYP51A1 CP51|CYP51|CYPL1|LDM|P450-14DM|P450L1 cytochrome P450 family 51 subfamily A member 1 protein-coding chr18-2705 chr18 62198154 62198364 + 4.24 0.000 intron (NR_144409, intron 1 of 31) intron (NR_144409, intron 1 of 31) 11004 NR_144412 57614 Hs.465323 NM_020854 ENSG00000134444 RELCH HsT3308|HsT885|KIAA1468 RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing protein-coding chr1-9845 chr1 63821260 63821470 + 4.24 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 47348 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chrX-4298 chrX 43358335 43358545 + 4.24 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR 181446 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr5-8295 chr5 114362653 114362863 + 4.24 0.000 exon (NM_021614, exon 1 of 8) exon (NM_021614, exon 1 of 8) 439 NM_001278204 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr16-6979 chr16 86840812 86841022 + 4.24 0.000 Intergenic MLT2A1|LTR|ERVL 118826 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr7-7478 chr7 97920149 97920359 + 4.24 0.000 intron (NR_147989, intron 3 of 18) AluSx1|SINE|Alu 8187 NM_001352496 440 Hs.489207 NM_001673 ENSG00000070669 ASNS ASNSD|TS11 asparagine synthetase (glutamine-hydrolyzing) protein-coding chr13-2067 chr13 58499652 58499862 + 4.24 0.000 Intergenic AluSx4|SINE|Alu -266640 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr3-7993 chr3 183281191 183281401 + 4.24 0.000 intron (NM_015078, intron 14 of 29) intron (NM_015078, intron 14 of 29) 28043 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr7-4264 chr7 4567725 4567935 + 4.24 0.000 Intergenic AluSx|SINE|Alu -114465 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr4-8733 chr4 184785305 184785515 + 4.24 0.000 intron (NM_001995, intron 3 of 20) intron (NM_001995, intron 3 of 20) 13636 NR_003542 643036 Hs.689630 NR_003542 ENSG00000249138 SLED1 - proteoglycan 3, pro eosinophil major basic protein 2 pseudogene pseudo chr1-15600 chr1 160913305 160913515 + 4.24 0.000 Intergenic LTR5_Hs|LTR|ERVK -19055 NR_110695 101928372 NR_110695 ENSG00000198358 LOC101928372 - uncharacterized LOC101928372 ncRNA chr8-5942 chr8 19506350 19506560 + 4.24 0.000 intron (NM_001354497, intron 1 of 7) intron (NM_001354497, intron 1 of 7) 96090 NM_001354494 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr7-8842 chr7 87084314 87084524 + 4.24 0.000 Intergenic LTR40a|LTR|ERVL -24765 NM_001142749 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr14-4224 chr14 98000320 98000530 + 4.24 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -22301 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr2-12997 chr2 106269994 106270204 + 4.24 0.000 Intergenic CpG -75760 NM_001253875 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr14-5081 chr14 85634536 85634746 + 4.24 0.000 3' UTR (NM_013231, exon 2 of 2) 3' UTR (NM_013231, exon 2 of 2) 101292 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr6-5724 chr6 144070729 144070939 + 4.24 0.000 Intergenic Intergenic -6235 NM_001080955 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr3-9923 chr3 87374823 87375033 + 4.24 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -98344 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding chr17-6791 chr17 4853146 4853356 + 4.24 0.000 intron (NM_015716, intron 1 of 30) intron (NM_015716, intron 1 of 30) 19911 NM_170663 50488 Hs.443417 NM_015716 ENSG00000141503 MINK1 B55|MAP4K6|MINK|YSK2|ZC3 misshapen like kinase 1 protein-coding chr5-4569 chr5 23074818 23075028 + 4.24 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -221579 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding chr2-9678 chr2 34977772 34977982 + 4.24 0.000 Intergenic L1MC5a|LINE|L1 300320 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr12-6478 chr12 101626047 101626257 + 4.24 0.000 intron (NM_206821, intron 3 of 28) intron (NM_206821, intron 3 of 28) 31181 NM_002465 4604 Hs.654589 NM_002465 ENSG00000196091 MYBPC1 LCCS4|MYBPCC|MYBPCS myosin binding protein C, slow type protein-coding chr2-6480 chr2 171767038 171767248 + 4.24 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 79388 NM_001271785 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr15-5229 chr15 96779055 96779265 + 4.24 0.000 intron (NR_102754, intron 1 of 2) intron (NR_102754, intron 1 of 2) 2494 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA chr4-6000 chr4 188120099 188120309 + 4.24 0.000 Intergenic AluSc|SINE|Alu -10601 NM_173553 205860 Hs.276429 NM_173553 ENSG00000179046 TRIML2 SPRYD6 tripartite motif family like 2 protein-coding chr21-980 chr21 9563931 9564141 + 4.24 0.000 Intergenic Intergenic 21006 NR_135512 105379511 Hs.462323 NR_135512 LOC105379511 - nuclear receptor corepressor 1 pseudogene pseudo chr22-3543 chr22 16530530 16530740 + 4.24 0.000 Intergenic (TGGCCC)n|Simple_repeat|Simple_repeat 62175 NM_014406 150160 Hs.128342 NM_014406 ENSG00000198445 CCT8L2 CESK1 chaperonin containing TCP1 subunit 8 like 2 protein-coding chrX-4765 chrX 95565287 95565497 + 4.24 0.000 Intergenic L1MA2|LINE|L1 -502166 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr9-7570 chr9 35775392 35775602 + 4.24 0.000 Intergenic LTR33A_|LTR|ERVL -16912 NM_003995 4882 Hs.78518 NM_000907 ENSG00000159899 NPR2 AMDM|ANPRB|ANPb|ECDM|GUC2B|GUCY2B|NPRB|NPRBi|SNSK natriuretic peptide receptor 2 protein-coding chrX-4779 chrX 97425777 97425987 + 4.24 0.000 intron (NM_007309, intron 25 of 26) intron (NM_007309, intron 25 of 26) 138653 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr16-6719 chr16 72467213 72467423 + 4.24 0.000 intron (NR_159371, intron 3 of 5) intron (NR_159371, intron 3 of 5) 197652 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr8-5113 chr8 62688609 62688819 + 4.24 0.000 intron (NM_001304533, intron 3 of 6) (CAGA)n|Simple_repeat|Simple_repeat -289147 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr13-3183 chr13 110467145 110467355 + 4.24 0.000 intron (NM_001846, intron 27 of 47) intron (NM_001846, intron 27 of 47) -3963 NM_001267044 100129836 Hs.640035 NM_001267044 COL4A2-AS2 - COL4A2 antisense 2 protein-coding chr12-8331 chr12 130679844 130680054 + 4.24 0.000 intron (NM_001351226, intron 1 of 21) intron (NM_001351226, intron 1 of 21) 36350 NM_001351227 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding chr11-8968 chr11 20612535 20612745 + 4.24 0.000 intron (NM_004211, intron 5 of 15) AluJr4|SINE|Alu 13240 NM_004211 9152 Hs.136557 NM_004211 ENSG00000165970 SLC6A5 GLYT-2|GLYT2|HKPX3|NET1 solute carrier family 6 member 5 protein-coding chr7-8551 chr7 56084311 56084521 + 4.24 0.000 intron (NM_001258459, intron 4 of 10) AluSq2|SINE|Alu 8580 NM_006213 5260 Hs.730821 NM_006213 ENSG00000164776 PHKG1 PHKG phosphorylase kinase catalytic subunit gamma 1 protein-coding chr8-5525 chr8 66033083 66033293 + 4.24 0.000 intron (NM_033105, intron 1 of 5) intron (NM_033105, intron 1 of 5) 11635 NM_033105 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr19-5347 chr19 4664466 4664676 + 4.24 0.000 intron (NM_019107, intron 3 of 5) intron (NM_019107, intron 3 of 5) 5832 NM_019107 56005 Hs.465645 NM_019107 ENSG00000074842 MYDGF C19orf10|EUROIMAGE1875335|IL25|IL27|IL27w|R33729_1|SF20 myeloid derived growth factor protein-coding chr1-14885 chr1 81601076 81601286 + 4.24 0.000 intron (NM_001366008, intron 3 of 26) intron (NM_001366008, intron 3 of 26) -43479 NR_125943 101927434 Hs.130394 NR_125943 ENSG00000234953 LOC101927434 - uncharacterized LOC101927434 ncRNA chr11-8808 chr11 11416655 11416865 + 4.24 0.000 intron (NM_001363464, intron 3 of 9) intron (NM_001363464, intron 3 of 9) -63510 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr4-5102 chr4 148130730 148130940 + 4.24 0.000 intron (NR_148974, intron 4 of 6) AluY|SINE|Alu 311579 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr2-14303 chr2 216806831 216807041 + 4.24 0.000 Intergenic Intergenic 53128 NM_003284 7141 Hs.3017 NM_003284 ENSG00000118245 TNP1 TP1 transition protein 1 protein-coding chr2-13220 chr2 122931761 122931971 + 4.24 0.000 Intergenic Intergenic 141615 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA chr1-13509 chr1 5225463 5225673 + 4.24 0.000 Intergenic MLT2B2|LTR|ERVL 570959 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr1-14797 chr1 71498305 71498515 + 4.24 0.000 intron (NM_173808, intron 6 of 6) intron (NM_173808, intron 6 of 6) 338602 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr2-10202 chr2 98995130 98995340 + 4.24 0.000 Intergenic AluJr4|SINE|Alu -59010 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr12-3377 chr12 100091016 100091226 + 4.24 0.000 intron (NM_001006947, intron 7 of 12) AluSz6|SINE|Alu 51753 NM_015054 23074 Hs.572154 NM_015054 ENSG00000111647 UHRF1BP1L SHIP164 UHRF1 binding protein 1 like protein-coding chr4-6510 chr4 160671526 160671736 + 4.24 0.000 Intergenic ERVL-E-int|LTR|ERVL -893847 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA chr20-3168 chr20 42083075 42083285 + 4.24 0.000 intron (NM_133170, intron 30 of 31) (GA)n|Simple_repeat|Simple_repeat -464803 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr11-10138 chr11 89325674 89325884 + 4.24 0.000 3' UTR (NM_001143836, exon 17 of 17) 3' UTR (NM_001143836, exon 17 of 17) 147904 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding chr2-12202 chr2 42133803 42134013 + 4.24 0.000 Intergenic MER5B|DNA|hAT-Charlie -35445 NM_019063 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr6-6804 chr6 5695815 5696025 + 4.24 0.000 promoter-TSS (NR_110842) promoter-TSS (NR_110842) -648 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr2-10503 chr2 226715593 226715803 + 4.24 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -56905 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr16-6226 chr16 28931944 28932154 + 4.24 0.000 promoter-TSS (NM_001178098) promoter-TSS (NM_001178098) 78 NM_001178098 930 Hs.652262 NM_001770 ENSG00000177455 CD19 B4|CVID3 CD19 molecule protein-coding chr4-6226 chr4 60433392 60433602 + 4.24 0.000 Intergenic L1PA16|LINE|L1 -489122 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr6-7626 chr6 78719218 78719428 + 4.24 0.000 Intergenic Intergenic -148228 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chr15-4178 chr15 97669281 97669491 + 4.24 0.000 Intergenic AluJb|SINE|Alu -108688 NR_110756 101927310 Hs.560324 NR_110756 ENSG00000259582 LOC101927310 - uncharacterized LOC101927310 ncRNA chr18-1873 chr18 26720668 26720878 + 4.24 0.000 Intergenic Intergenic -17135 NR_024259 728606 Hs.170599 NR_024259 ENSG00000265369 PCAT18 LINC01092 prostate cancer associated transcript 18 ncRNA chr6-6203 chr6 15042794 15043004 + 4.24 0.000 Intergenic Intergenic -203170 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr5-7401 chr5 24946613 24946823 + 4.24 0.000 Intergenic L1MA4A|LINE|L1 -106135 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA chr5-6162 chr5 50877713 50877923 + 4.24 0.000 Intergenic Intergenic 92369 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chr4-5683 chr4 22056936 22057146 + 4.24 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -108290 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr18-2111 chr18 51419855 51420065 + 4.24 0.000 intron (NR_040074, intron 1 of 2) AluYm1|SINE|Alu 27918 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr5-6861 chr5 119811122 119811332 + 4.24 0.000 Intergenic MIRb|SINE|MIR 181668 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr8-6937 chr8 104098679 104098889 + 4.24 0.000 intron (NM_001348498, intron 19 of 24) intron (NM_001348498, intron 19 of 24) -124551 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr4-5667 chr4 17358555 17358765 + 4.24 0.000 Intergenic Intergenic -37778 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr11-4639 chr11 29449469 29449679 + 4.24 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -144839 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr16-7085 chr16 89132352 89132562 + 4.24 0.000 intron (NR_104293, intron 7 of 10) intron (NR_104293, intron 7 of 10) -4091 NR_045667 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr12-6407 chr12 75997287 75997497 + 4.24 0.000 Intergenic MIR|SINE|MIR 34384 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr17-6999 chr17 50940527 50940737 + 4.24 0.000 Intergenic L2a|LINE|L2 -72654 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr10-8425 chr10 85402008 85402218 + 4.24 0.000 Intergenic Intergenic 30659 NR_120669 101929646 Hs.116129 NR_120669 LINC02647 - long intergenic non-protein coding RNA 2647 ncRNA chr16-5563 chr16 30965901 30966111 + 4.24 0.000 exon (NM_014712, exon 8 of 19) exon (NM_014712, exon 8 of 19) 8252 NM_014712 9739 Hs.297483 NM_014712 ENSG00000099381 SETD1A KMT2F|Set1|Set1A SET domain containing 1A, histone lysine methyltransferase protein-coding chr9-6444 chr9 83062764 83062974 + 4.24 0.000 5' UTR (NM_152573, exon 1 of 17) 5' UTR (NM_152573, exon 1 of 17) 273 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr15-5025 chr15 82801107 82801317 + 4.24 0.000 intron (NM_001281805, intron 1 of 12) intron (NM_001281805, intron 1 of 12) 4857 NM_001281805 123722 Hs.719372 NM_001007122 ENSG00000186628 FSD2 SPRYD1 fibronectin type III and SPRY domain containing 2 protein-coding chr11-7553 chr11 17593632 17593842 + 4.24 0.000 exon (NM_001292063, exon 27 of 56) exon (NM_001292063, exon 27 of 56) 46364 NM_001277269 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding chr13-2981 chr13 83841721 83841931 + 4.24 0.000 Intergenic Intergenic 40567 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr5-7756 chr5 61263610 61263820 + 4.24 0.000 intron (NR_146624, intron 1 of 2) intron (NR_146624, intron 1 of 2) 1214 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chrX-2091 chrX 22643582 22643792 + 4.24 0.000 intron (NR_073010, intron 4 of 11) LTR16C|LTR|ERVL -356273 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding chr5-6896 chr5 132041603 132041813 + 4.24 0.000 Intergenic L1PA13|LINE|L1 -18947 NM_000588 3562 Hs.694 NM_000588 ENSG00000164399 IL3 IL-3|MCGF|MULTI-CSF interleukin 3 protein-coding chr22-3825 chr22 31312622 31312832 + 4.24 0.000 Intergenic AluSg7|SINE|Alu -20193 NM_001135911 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr10-3903 chr10 68377554 68377764 + 4.24 0.000 3' UTR (NM_001042417, exon 12 of 12) 3' UTR (NM_001042417, exon 12 of 12) 29530 NM_017987 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr3-7432 chr3 120579039 120579249 + 4.24 0.000 Intergenic L1HS|LINE|L1 -17192 NM_001168331 4710 Hs.304613 NM_004547 ENSG00000065518 NDUFB4 B15|CI-B15 NADH:ubiquinone oxidoreductase subunit B4 protein-coding chr1-14472 chr1 47799208 47799418 + 4.24 0.000 intron (NM_001194986, intron 3 of 6) intron (NM_001194986, intron 3 of 6) 198072 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr6-6113 chr6 155188428 155188638 + 4.24 0.000 intron (NM_012454, intron 13 of 25) intron (NM_012454, intron 13 of 25) -28433 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr20-2762 chr20 51303618 51303828 + 4.24 0.000 Intergenic LTR28C|LTR|ERV1 149254 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr1-15163 chr1 107139553 107139763 + 4.24 0.000 promoter-TSS (NM_014917) promoter-TSS (NM_014917) -430 NM_014917 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr20-4411 chr20 59403586 59403796 + 4.24 0.000 Intergenic Intergenic 103080 NM_001302455 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding chr5-7777 chr5 63044584 63044794 + 4.24 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 465870 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr2-12915 chr2 100593556 100593766 + 4.24 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -10078 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr3-11240 chr3 196540304 196540514 + 4.24 0.000 Intergenic AluSq2|SINE|Alu -25063 NM_001320473 255798 Hs.631933 NM_001077657 ENSG00000214097 SMCO1 C3orf43 single-pass membrane protein with coiled-coil domains 1 protein-coding KI270844.1-1 KI270844.1 98836 99046 + 4.24 0.000 NA NA NA NA chr5-6311 chr5 126920260 126920470 + 4.24 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 110193 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr22-3868 chr22 33786894 33787104 + 4.24 0.000 intron (NM_001362953, intron 1 of 14) AluSx4|SINE|Alu 62013 NR_038949 100506195 Hs.658872 NR_038949 ENSG00000224973 LARGE-AS1 - LARGE antisense RNA 1 ncRNA chr8-6748 chr8 90199523 90199733 + 4.24 0.000 Intergenic MER30|DNA|hAT-Charlie -21860 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr10-7147 chr10 101343687 101343897 + 4.24 0.000 Intergenic L1MC4|LINE|L1 -10241 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr2-10593 chr2 14175 14385 + 4.24 0.000 Intergenic Intergenic 32225 NM_001077710 642273 Hs.8379 NM_001077710 ENSG00000184731 FAM110C - family with sequence similarity 110 member C protein-coding chr17-6663 chr17 74865038 74865248 + 4.24 0.000 intron (NM_004110, intron 6 of 11) L2a|LINE|L2 3610 NM_001258016 2232 Hs.69745 NM_004110 ENSG00000161513 FDXR ADR|ADXR|ANOA ferredoxin reductase protein-coding chr4-7913 chr4 107244741 107244951 + 4.24 0.000 Intergenic MIR|SINE|MIR -208533 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr5-8024 chr5 89003711 89003921 + 4.24 0.000 intron (NR_136221, intron 3 of 6) LTR12C|LTR|ERV1 -99711 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr17-7338 chr17 6079062 6079272 + 4.24 0.000 intron (NM_015253, intron 1 of 8) intron (NM_015253, intron 1 of 8) 8553 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr7-7371 chr7 63029110 63029320 + 4.24 0.000 Intergenic Intergenic 274841 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr3-7944 chr3 157505936 157506146 + 4.24 0.000 Intergenic AluSz|SINE|Alu -2436 NM_001167915 79674 Hs.658046 NM_024621 ENSG00000197415 VEPH1 MELT|VEPH ventricular zone expressed PH domain containing 1 protein-coding chr13-3804 chr13 46062916 46063126 + 4.24 0.000 intron (NM_001872, intron 8 of 10) intron (NM_001872, intron 8 of 10) 10173 NR_046227 100509894 Hs.626139 NR_046226 ENSG00000235903 CPB2-AS1 - CPB2 antisense RNA 1 ncRNA chr14-2689 chr14 78913113 78913323 + 4.24 0.000 intron (NM_004796, intron 7 of 16) intron (NM_004796, intron 7 of 16) -286764 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr10-6584 chr10 80220215 80220425 + 4.24 0.000 TTS (NR_038464) TTS (NR_038464) 12610 NR_038464 439990 Hs.365566 NR_038464 ENSG00000237523 LINC00857 - long intergenic non-protein coding RNA 857 ncRNA chr17-8313 chr17 71522384 71522594 + 4.24 0.000 Intergenic L1PA16|LINE|L1 -320310 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr10-9118 chr10 127117175 127117385 + 4.24 0.000 intron (NM_001290223, intron 25 of 51) intron (NM_001290223, intron 25 of 51) 79311 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chrX-4070 chrX 20941548 20941758 + 4.24 0.000 Intergenic MLT2F|LTR|ERVL -432765 NM_001330770 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr8-5817 chr8 4029218 4029428 + 4.24 0.000 intron (NM_033225, intron 4 of 69) THE1B|LTR|ERVL-MaLR 965591 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr1-14229 chr1 36170987 36171197 + 4.24 0.000 exon (NM_001286365, exon 2 of 16) exon (NM_001286365, exon 2 of 16) 14932 NM_018067 55700 Hs.356096 NM_018067 ENSG00000116871 MAP7D1 PARCC1|RPRC1 MAP7 domain containing 1 protein-coding chr10-8716 chr10 102611681 102611891 + 4.24 0.000 intron (NM_001178133, intron 8 of 10) MIR|SINE|MIR -32709 NM_030912 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr18-2642 chr18 42994115 42994325 + 4.24 0.000 intron (NM_001272077, intron 2 of 5) HERVH-int|LTR|ERV1 121465 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr12-6034 chr12 110603587 110603797 + 4.24 0.000 Intergenic AluSz|SINE|Alu -10437 NM_001319680 79600 Hs.211511 NM_024549 ENSG00000204852 TCTN1 JBTS13|TECT1 tectonic family member 1 protein-coding chr3-5208 chr3 76222667 76222877 + 4.24 0.000 Intergenic AluSx1|SINE|Alu -437223 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr9-7447 chr9 26546438 26546648 + 4.24 0.000 Intergenic MER102a|DNA|hAT-Charlie 346259 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr11-9957 chr11 76848090 76848300 + 4.24 0.000 Intergenic Intergenic -12723 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr15-2766 chr15 27701623 27701833 + 4.24 0.000 Intergenic L1MA4A|LINE|L1 397587 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr15-4472 chr15 49697932 49698142 + 4.24 0.000 Intergenic LTR16D|LTR|ERVL 76989 NM_020234 56986 Hs.127432 NM_020234 ENSG00000104047 DTWD1 MDS009 DTW domain containing 1 protein-coding chr12-6166 chr12 11450270 11450480 + 4.24 0.000 intron (NR_148969, intron 2 of 4) MER4B|LTR|ERV1 36303 NR_148969 440084 Hs.121321 NR_148969 LOC440084 - uncharacterized LOC440084 ncRNA chr1-10115 chr1 100365815 100366025 + 4.24 0.000 intron (NM_001319212, intron 2 of 13) intron (NM_001319212, intron 2 of 13) 13414 NM_001319210 8556 Hs.127411 NM_003672 ENSG00000079335 CDC14A DFNB105|DFNB32|DFNB35|cdc14|hCDC14 cell division cycle 14A protein-coding chr10-7660 chr10 26850575 26850785 + 4.24 0.000 intron (NM_001178116, intron 1 of 11) AluSg|SINE|Alu 10407 NM_001178124 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr7-5903 chr7 96369061 96369271 + 4.24 0.000 Intergenic Intergenic -47019 NM_001160210 10165 Hs.489190 NM_014251 ENSG00000004864 SLC25A13 ARALAR2|CITRIN|CTLN2 solute carrier family 25 member 13 protein-coding chr8-4914 chr8 97441765 97441975 + 4.24 0.000 intron (NR_125390, intron 1 of 2) intron (NR_125390, intron 1 of 2) 4627 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr1-12619 chr1 38097020 38097230 + 4.24 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 7894 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr18-2603 chr18 23168764 23168974 + 4.24 0.000 intron (NM_138375, intron 1 of 9) MER41A|LTR|ERV1 13044 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr8-6738 chr8 88258230 88258440 + 4.24 0.000 intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 69148 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr12-4265 chr12 117662745 117662955 + 4.24 0.000 intron (NM_173598, intron 5 of 19) intron (NM_173598, intron 5 of 19) -301048 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr12-7702 chr12 90531722 90531932 + 4.24 0.000 Intergenic Intergenic 238509 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr12-7044 chr12 39509591 39509801 + 4.24 0.000 Intergenic L1M2b|LINE|L1 -66576 NM_001173465 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr18-2986 chr18 23954255 23954465 + 4.24 0.000 intron (NM_001127717, intron 73 of 73) AluJr4|SINE|Alu -38527 NM_153211 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr9-4286 chr9 112743576 112743786 + 4.24 0.000 Intergenic MIR3|SINE|MIR -7079 NM_001012994 401548 Hs.522350 NM_001012994 ENSG00000148158 SNX30 ATG24A sorting nexin family member 30 protein-coding chr5-5298 chr5 126186691 126186901 + 4.24 0.000 intron (NR_105042, intron 1 of 3) MSTA1|LTR|ERVL-MaLR 7219 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr10-8091 chr10 68360470 68360680 + 4.24 0.000 intron (NR_103476, intron 15 of 18) AluY|SINE|Alu -27647 NM_001033083 64081 Hs.198158 NM_022129 ENSG00000108187 PBLD HEL-S-306|MAWBP|MAWDBP phenazine biosynthesis like protein domain containing protein-coding chr18-2836 chr18 7182922 7183132 + 4.24 0.000 Intergenic L1PA6|LINE|L1 -48077 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr10-8036 chr10 63504943 63505153 + 4.24 0.000 intron (NM_001322258, intron 1 of 24) AluY|SINE|Alu -16353 NM_001001330 221035 Hs.499833 NM_001001330 ENSG00000165476 REEP3 C10orf74|Yip2b receptor accessory protein 3 protein-coding chr10-7200 chr10 112341200 112341410 + 4.24 0.000 intron (NR_028134, intron 6 of 18) intron (NR_028134, intron 6 of 18) 15290 NR_028134 390003 Hs.534691 NR_028134 ENSG00000243316 GUCY2GP GUCY2G guanylate cyclase 2G, pseudogene pseudo chr14-5291 chr14 100820107 100820317 + 4.24 0.000 Intergenic Intergenic 5721 NR_039729 100616495 NR_039729 ENSG00000266461 MIR2392 - microRNA 2392 ncRNA chrX-2970 chrX 19507602 19507812 + 4.24 0.000 intron (NM_001001671, intron 1 of 28) L1MC1|LINE|L1 7554 NM_001001671 389840 Hs.713701 NM_001001671 ENSG00000180815 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding chr20-4276 chr20 49794361 49794571 + 4.24 0.000 Intergenic Intergenic -18247 NM_001260491 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr19-6931 chr19 46475786 46475996 + 4.24 0.000 Intergenic Intergenic -4328 NM_018215 55228 Hs.8395 NM_018215 ENSG00000182013 PNMA8A PNMAL1 PNMA family member 8A protein-coding chr17-7748 chr17 34411819 34412029 + 4.24 0.000 Intergenic Intergenic -48691 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr12-8031 chr12 113837123 113837333 + 4.24 0.000 intron (NM_001146698, intron 23 of 24) intron (NM_001146698, intron 23 of 24) -63545 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr8-4684 chr8 139312804 139313014 + 4.24 0.000 Intergenic Intergenic 390214 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr20-2942 chr20 11578048 11578258 + 4.24 0.000 Intergenic Intergenic 292562 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr2-10697 chr2 26102322 26102532 + 4.24 0.000 intron (NM_016131, intron 2 of 5) AluY|SINE|Alu 68343 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr12-7330 chr12 55226959 55227169 + 4.24 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 6039 NM_001005280 121364 Hs.554557 NM_001005280 ENSG00000179919 OR10A7 OR12-6 olfactory receptor family 10 subfamily A member 7 protein-coding chr19-5787 chr19 32934662 32934872 + 4.24 0.000 intron (NM_032816, intron 7 of 18) intron (NM_032816, intron 7 of 18) 37191 NM_032816 84902 Hs.599703 NM_032816 ENSG00000121289 CEP89 CCDC123|CEP123 centrosomal protein 89 protein-coding chr9-5370 chr9 91112699 91112909 + 4.24 0.000 Intergenic Intergenic -6258 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr6-4877 chr6 89755307 89755517 + 4.24 0.000 intron (NM_014611, intron 20 of 101) intron (NM_014611, intron 20 of 101) 64382 NM_014611 23195 Hs.529948 NM_014611 ENSG00000112159 MDN1 Rea1 midasin AAA ATPase 1 protein-coding chr6-5764 chr6 162532405 162532615 + 4.24 0.000 intron (NM_004562, intron 1 of 11) intron (NM_004562, intron 1 of 11) -194622 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr6-8023 chr6 118309624 118309834 + 4.24 0.000 intron (NM_001029858, intron 7 of 7) intron (NM_001029858, intron 7 of 7) -191644 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr5-6718 chr5 71954462 71954672 + 4.24 0.000 Intergenic Intergenic -152908 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr2-4856 chr2 96557772 96557982 + 4.24 0.000 Intergenic AluSx1|SINE|Alu 19998 NM_001319092 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr10-6814 chr10 15941698 15941908 + 4.24 0.000 Intergenic AluJo|SINE|Alu -81270 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chr12-8057 chr12 115914872 115915082 + 4.24 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 233677 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr5-2937 chr5 142239651 142239861 + 4.24 0.000 Intergenic AluJr|SINE|Alu 78566 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr3-10059 chr3 107007962 107008172 + 4.24 0.000 Intergenic L1MA5|LINE|L1 232571 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr15-5177 chr15 93013772 93013982 + 4.24 0.000 intron (NM_001271, intron 36 of 38) AluSz|SINE|Alu 59279 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr12-7827 chr12 100356875 100357085 + 4.24 0.000 promoter-TSS (NM_139319) promoter-TSS (NM_139319) -94 NM_139319 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr22-3947 chr22 37384653 37384863 + 4.24 0.000 intron (NM_052906, intron 2 of 2) intron (NM_052906, intron 2 of 2) -29919 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr15-4221 chr15 26851682 26851892 + 4.24 0.000 Intergenic Intergenic -15275 NM_000810 2558 Hs.24969 NM_000810 ENSG00000186297 GABRA5 - gamma-aminobutyric acid type A receptor alpha5 subunit protein-coding chr1-12173 chr1 186967716 186967926 + 4.24 0.000 intron (NM_024420, intron 15 of 17) intron (NM_024420, intron 15 of 17) -125021 NR_126347 104169671 NR_126347 ENSG00000230426 LINC01036 - long intergenic non-protein coding RNA 1036 ncRNA chr4-8616 chr4 172374008 172374218 + 4.24 0.000 intron (NM_001034845, intron 5 of 12) HERV9NC-int|LTR|ERV1 314804 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr8-6390 chr8 54759024 54759234 + 4.24 0.000 Intergenic Intergenic 143033 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr5-6444 chr5 163334030 163334240 + 4.24 0.000 Intergenic L2|LINE|L2 -103436 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr2-11618 chr2 3632965 3633175 + 4.24 0.000 intron (NM_199235, intron 4 of 7) intron (NM_199235, intron 4 of 7) -25130 NM_018436 55821 Hs.97899 NM_018436 ENSG00000151360 ALLC ALC allantoicase protein-coding chr18-2808 chr18 4110067 4110277 + 4.24 0.000 intron (NM_001242761, intron 2 of 11) Tigger3a|DNA|TcMar-Tigger 147819 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA chr3-9285 chr3 42296044 42296254 + 4.24 0.000 Intergenic AluJr|SINE|Alu -29964 NM_000729 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr4-6421 chr4 129615516 129615726 + 4.24 0.000 Intergenic MamGypsy2-LTR|LTR|Gypsy 155857 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr22-3845 chr22 32394057 32394267 + 4.24 0.000 intron (NM_014306, intron 9 of 11) AluY|SINE|Alu 17498 NR_038918 339666 Hs.654761 NR_038918 ENSG00000230736 LOC339666 - uncharacterized LOC339666 ncRNA chr11-9241 chr11 42062473 42062683 + 4.24 0.000 intron (NR_135065, intron 4 of 9) intron (NR_135065, intron 4 of 9) 22880 NR_135065 101928591 Hs.149771 NR_135065 LINC02745 - long intergenic non-protein coding RNA 2745 ncRNA chr15-3647 chr15 85989620 85989830 + 4.24 0.000 Intergenic Intergenic -89895 NM_152336 123624 Hs.31795 NM_152336 ENSG00000273540 AGBL1 CCP4|FECD8 ATP/GTP binding protein like 1 protein-coding chr2-10278 chr2 127788178 127788388 + 4.24 0.000 intron (NM_001006622, intron 1 of 5) SVA_F|Retroposon|SVA 22888 NM_001006623 55339 Hs.554831 NM_018383 ENSG00000136709 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding chr4-6845 chr4 8697916 8698126 + 4.24 0.000 Intergenic Intergenic 105256 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr6-8440 chr6 152821650 152821860 + 4.24 0.000 Intergenic Intergenic 70958 NM_194435 7432 Hs.53973 NM_003381 ENSG00000146469 VIP PHM27 vasoactive intestinal peptide protein-coding chr13-2577 chr13 69498774 69498984 + 4.24 0.000 Intergenic MER63A|DNA|hAT-Blackjack 276533 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA chr5-3828 chr5 103710839 103711049 + 4.24 0.000 Intergenic HAL1|LINE|L1 -148155 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr12-7646 chr12 82415407 82415617 + 4.24 0.000 intron (NR_144941, intron 6 of 11) MLT2B1|LTR|ERVL -56707 NR_033192 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr12-3881 chr12 116891627 116891837 + 4.24 0.000 Intergenic AluSq|SINE|Alu -10291 NM_003806 8739 Hs.26605 NM_003806 ENSG00000135116 HRK DP5|HARAKIRI harakiri, BCL2 interacting protein protein-coding chr13-4375 chr13 108079806 108080016 + 4.24 0.000 Intergenic AluSx1|SINE|Alu 134871 NM_002312 3981 Hs.166091 NM_002312 ENSG00000174405 LIG4 LIG4S DNA ligase 4 protein-coding chr1-11864 chr1 38129654 38129864 + 4.24 0.000 Intergenic Intergenic 40528 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr2-11115 chr2 132582207 132582417 + 4.24 0.000 intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 87893 NM_001321235 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr22-3546 chr22 16930563 16930773 + 4.24 0.000 Intergenic Intergenic 77554 NM_001366857 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2 associated binding protein family member 4 protein-coding chrX-3456 chrX 25425550 25425760 + 4.24 0.000 Intergenic L1PB1|LINE|L1 -409690 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr4-8176 chr4 130643017 130643227 + 4.24 0.000 Intergenic L1PA4|LINE|L1 266761 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr5-7502 chr5 35431262 35431472 + 4.24 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -186496 NM_144722 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding chr6-7114 chr6 35068666 35068876 + 4.24 0.000 intron (NM_015245, intron 13 of 23) intron (NM_015245, intron 13 of 23) 72568 NM_001366331 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr14-3253 chr14 77230160 77230370 + 4.24 0.000 intron (NM_020431, intron 6 of 23) L1ME3A|LINE|L1 -35953 NR_031661 100302236 NR_031661 ENSG00000221754 MIR1260A MIR1260|MIRN1260|hsa-mir-1260|hsa-mir-1260a|mir-1260a microRNA 1260a ncRNA chr7-9203 chr7 116566817 116567027 + 4.24 0.000 intron (NR_120506, intron 4 of 4) L1ME3F|LINE|L1 40560 NM_001172897 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr5-6672 chr5 60262904 60263114 + 4.24 0.000 intron (NM_001364599, intron 1 of 16) intron (NM_001364599, intron 1 of 16) 109654 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr16-7090 chr16 89231519 89231729 + 4.24 0.000 non-coding (NR_037705, exon 6 of 6) non-coding (NR_037705, exon 6 of 6) 13921 NM_182531 197320 Hs.647385 NM_182531 ENSG00000170100 ZNF778 - zinc finger protein 778 protein-coding chr11-8326 chr11 76491075 76491285 + 4.24 0.000 intron (NM_001300942, intron 9 of 21) AluJo|SINE|Alu 46155 NM_020193 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding chr10-7945 chr10 53401258 53401468 + 4.24 0.000 Intergenic AluSp|SINE|Alu -629663 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr2-8161 chr2 85077443 85077653 + 4.24 0.000 Intergenic MIR|SINE|MIR -10201 NR_146453 100996478 Hs.434398 NR_146453 ENSG00000260840 LINC01964 - long intergenic non-protein coding RNA 1964 ncRNA chr12-7142 chr12 47961352 47961562 + 4.24 0.000 Intergenic LTR29|LTR|ERV1 -2090 NM_024056 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr1-9900 chr1 70082795 70083005 + 4.24 0.000 intron (NM_001370785, intron 24 of 26) AluSz|SINE|Alu 122679 NM_017768 55631 Hs.147836 NM_017768 ENSG00000066557 LRRC40 dJ677H15.1 leucine rich repeat containing 40 protein-coding chr2-13085 chr2 111464423 111464633 + 4.24 0.000 intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 30633 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|LINC00978|MIR4435-1HG|MORRBID|lncRNA-AWPPH MIR4435-2 host gene ncRNA chr2-11457 chr2 228955147 228955357 + 4.24 0.000 Intergenic Intergenic 276840 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr3-10772 chr3 157357390 157357600 + 4.24 0.000 intron (NM_024621, intron 9 of 13) intron (NM_024621, intron 9 of 13) -79355 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr11-9180 chr11 35714950 35715160 + 4.24 0.000 intron (NM_017583, intron 2 of 4) intron (NM_017583, intron 2 of 4) 52280 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr7-8941 chr7 96759438 96759648 + 4.24 0.000 Intergenic L1PBa|LINE|L1 -49652 NM_006304 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr1-12781 chr1 78089983 78090193 + 4.24 0.000 intron (NM_001304725, intron 2 of 5) MER58B|DNA|hAT-Charlie 44122 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr8-3303 chr8 26291819 26292029 + 4.24 0.000 intron (NM_002717, intron 1 of 9) intron (NM_002717, intron 1 of 9) 416 NM_002717 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chrX-4702 chrX 86680488 86680698 + 4.24 0.000 intron (NM_001139515, intron 4 of 11) intron (NM_001139515, intron 4 of 11) 417625 NM_001139515 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr17-8604 chr17 80879167 80879377 + 4.24 0.000 intron (NM_001163034, intron 13 of 29) intron (NM_001163034, intron 13 of 29) -73640 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr12-6246 chr12 40903139 40903349 + 4.24 0.000 intron (NM_001256064, intron 1 of 15) intron (NM_001256064, intron 1 of 15) -5113 NM_175038 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr3-9959 chr3 95155230 95155440 + 4.24 0.000 Intergenic MSTA|LTR|ERVL-MaLR 217072 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr1-16587 chr1 236350712 236350922 + 4.24 0.000 Intergenic LTR23|LTR|ERV1 -43469 NM_145861 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr11-4756 chr11 111811429 111811639 + 4.24 0.000 intron (NR_147984, intron 13 of 15) AluSx|SINE|Alu -45145 NM_001177563 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr1-15146 chr1 104561241 104561451 + 4.24 0.000 Intergenic HERVL-int|LTR|ERVL 488323 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo chr19-5945 chr19 55327995 55328205 + 4.24 0.000 Intergenic AluSq|SINE|Alu -2759 NR_104071 284417 Hs.382625 NM_001085488 ENSG00000180061 TMEM150B DRAM3|TMEM224|TTN2 transmembrane protein 150B protein-coding chr4-6121 chr4 20889515 20889725 + 4.24 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) -6910 NM_025221 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr6-6196 chr6 13389470 13389680 + 4.24 0.000 intron (NM_018988, intron 1 of 1) L1PA6|LINE|L1 18562 NM_001242630 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr17-8380 chr17 74914451 74914661 + 4.24 0.000 Intergenic AluJb|SINE|Alu 8699 NM_001282489 124590 Hs.376688 NM_173477 ENSG00000182040 USH1G ANKS4A|SANS USH1 protein network component sans protein-coding chrX-4173 chrX 32954133 32954343 + 4.24 0.000 intron (NM_000109, intron 2 of 78) intron (NM_000109, intron 2 of 78) 174189 NM_004010 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr1-13671 chr1 11477110 11477320 + 4.24 0.000 Intergenic Intergenic -1940 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr12-6465 chr12 96621926 96622136 + 4.24 0.000 intron (NM_001306084, intron 27 of 67) L3|LINE|CR1 132454 NM_001367885 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr17-7766 chr17 35500766 35500976 + 4.24 0.000 intron (NM_001363830, intron 2 of 4) LTR2|LTR|ERV1 -13132 NM_001195790 100506736 Hs.447559 NM_001145027 ENSG00000205045 SLFN12L - schlafen family member 12 like protein-coding chr9-8189 chr9 107415220 107415430 + 4.24 0.000 Intergenic L1MC3|LINE|L1 51260 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr6-6067 chr6 138430164 138430374 + 4.24 0.000 intron (NM_020464, intron 5 of 6) intron (NM_020464, intron 5 of 6) 5025 NR_036099 100423001 NR_036099 ENSG00000266555 MIR3145 mir-3145 microRNA 3145 ncRNA chr2-7151 chr2 198810275 198810485 + 4.24 0.000 Intergenic Intergenic -435283 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr3-6560 chr3 121688907 121689117 + 4.24 0.000 intron (NM_001256486, intron 14 of 21) SVA_D|Retroposon|SVA -28109 NM_005335 3059 Hs.14601 NM_005335 ENSG00000180353 HCLS1 CTTNL|HS1|lckBP1|p75 hematopoietic cell-specific Lyn substrate 1 protein-coding chr1-8129 chr1 10694688 10694898 + 4.24 0.000 intron (NM_001079843, intron 3 of 20) CpG-426 101853 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr15-4617 chr15 61757394 61757604 + 4.24 0.000 Intergenic Intergenic 27581 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr5-6042 chr5 172034152 172034362 + 4.24 0.000 Intergenic AluSx1|SINE|Alu -27384 NM_012300 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr11-5577 chr11 106482915 106483125 + 4.24 0.000 Intergenic MER5B|DNA|hAT-Charlie 231613 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr5-7490 chr5 34795716 34795926 + 4.24 0.000 intron (NM_015577, intron 3 of 17) MIRb|SINE|MIR -43343 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding chr2-8372 chr2 111194004 111194214 + 4.24 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 73195 NM_138623 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr3-4630 chr3 17870254 17870464 + 4.24 0.000 Intergenic MIR|SINE|MIR -92193 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr16-3376 chr16 58322094 58322304 + 4.24 0.000 Intergenic AluSx|SINE|Alu -27152 NM_001080492 221191 Hs.411239 NM_001080492 ENSG00000103023 PRSS54 CT67|KLKBL4 serine protease 54 protein-coding chr10-7449 chr10 7195052 7195262 + 4.24 0.000 intron (NM_001029880, intron 15 of 20) intron (NM_001029880, intron 15 of 20) -8373 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr20-2142 chr20 36612545 36612755 + 4.24 0.000 TTS (NM_199483) TTS (NM_199483) 6871 NM_199483 55969 Hs.584985 NM_018840 ENSG00000101084 RAB5IF C20orf24|PNAS-11|RIP5 RAB5 interacting factor protein-coding chr3-4710 chr3 56662056 56662266 + 4.24 0.000 intron (NM_001365638, intron 9 of 22) intron (NM_001365638, intron 9 of 22) 1885 NM_015224 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chr15-5062 chr15 85401767 85401977 + 4.24 0.000 intron (NM_007200, intron 1 of 36) intron (NM_007200, intron 1 of 36) 21269 NM_007200 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr2-6882 chr2 84786455 84786665 + 4.24 0.000 intron (NM_001370, intron 67 of 76) intron (NM_001370, intron 67 of 76) 94524 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr20-3105 chr20 31442471 31442681 + 4.24 0.000 intron (NM_153324, intron 1 of 1) L2a|LINE|L2 1944 NM_153324 245936 Hs.122509 NM_153324 ENSG00000180424 DEFB123 DEFB-23|DEFB23|ESC42-RELD defensin beta 123 protein-coding chr4-4618 chr4 79106292 79106502 + 4.24 0.000 intron (NR_038342, intron 3 of 5) L1PA8|LINE|L1 134649 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA chr1-11625 chr1 238884277 238884487 + 4.24 0.000 Intergenic Intergenic -398365 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr2-8369 chr2 110907027 110907237 + 4.24 0.000 intron (NM_001371254, intron 10 of 18) MLT1A|LTR|ERVL-MaLR 174559 NM_001371254 chr15-4905 chr15 77408915 77409125 + 4.24 0.000 intron (NM_024776, intron 1 of 7) AluJb|SINE|Alu 11084 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding chr11-10426 chr11 115780817 115781027 + 4.24 0.000 Intergenic UCON24|Unknown|Unknown -20722 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr13-4383 chr13 108871227 108871437 + 4.24 0.000 intron (NM_015011, intron 12 of 34) (TG)n|Simple_repeat|Simple_repeat 241721 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr1-8914 chr1 6715272 6715482 + 4.24 0.000 Intergenic SVA_D|Retroposon|SVA -9368 NR_104620 100505887 Hs.250839 NR_104620 LINC01672 NMR long intergenic non-protein coding RNA 1672 ncRNA chr8-7457 chr8 141595521 141595731 + 4.24 0.000 Intergenic MIRb|SINE|MIR -88396 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr1-13393 chr1 1819520 1819730 + 4.24 0.000 intron (NM_001282539, intron 2 of 10) AluJb|SINE|Alu -39594 NM_001353641 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr19-5793 chr19 34695906 34696116 + 4.24 0.000 Intergenic AluJr|SINE|Alu 18333 NM_001289187 55900 Hs.436350 NM_018443 ENSG00000089335 ZNF302 HSD16|MST154|MSTP154|ZNF135L|ZNF140L|ZNF327 zinc finger protein 302 protein-coding chr1-13261 chr1 225048919 225049129 + 4.24 0.000 intron (NM_001367479, intron 15 of 85) L1MC4|LINE|L1 119349 NM_001367481 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr16-6862 chr16 83741855 83742065 + 4.24 0.000 intron (NM_001220489, intron 9 of 12) MER1B|DNA|hAT-Charlie 62016 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr4-7960 chr4 111790380 111790590 + 4.24 0.000 Intergenic Intergenic -354969 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr5-9215 chr5 181161205 181161415 + 4.24 0.000 Intergenic Intergenic 6367 NM_206880 285659 Hs.553681 NM_206880 ENSG00000182613 OR2V2 OR2V3|OST713 olfactory receptor family 2 subfamily V member 2 protein-coding chr15-3558 chr15 33244486 33244696 + 4.24 0.000 intron (NR_046005, intron 4 of 8) intron (NR_046005, intron 4 of 8) 2964 NR_046005 100652857 Hs.439998 NR_046005 TMCO5B - transmembrane and coiled-coil domains 5B (pseudogene) pseudo chr1-13115 chr1 193609450 193609660 + 4.24 0.000 Intergenic L1MCb|LINE|L1 304810 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr3-2083 chr3 9831720 9831930 + 4.24 0.000 intron (NM_001198793, intron 11 of 11) AluSx|SINE|Alu 12183 NM_001351736 285367 Hs.33719 NM_173659 ENSG00000156990 RPUSD3 - RNA pseudouridine synthase D3 protein-coding chr12-7632 chr12 80797154 80797364 + 4.24 0.000 non-coding (NR_136887, exon 6 of 6) non-coding (NR_136887, exon 6 of 6) 34105 NR_120469 101928420 Hs.739989 NR_120468 ENSG00000257741 LINC01490 - long intergenic non-protein coding RNA 1490 ncRNA chr10-4079 chr10 47174183 47174393 + 4.24 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -125909 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr6-7513 chr6 64905160 64905370 + 4.24 0.000 intron (NM_001292009, intron 16 of 43) intron (NM_001292009, intron 16 of 43) -396153 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr2-14488 chr2 225942199 225942409 + 4.24 0.000 Intergenic Intergenic -200490 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr2-12537 chr2 66382154 66382364 + 4.24 0.000 Intergenic Intergenic -1047 NR_130931 729348 Hs.723595 NR_130931 ENSG00000232164 LINC01873 - long intergenic non-protein coding RNA 1873 ncRNA chr6-3700 chr6 165709314 165709524 + 4.24 0.000 Intergenic Intergenic -47139 NM_006661 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr12-8310 chr12 128986854 128987064 + 4.12 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -122731 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 TMEM132D-AS1 - TMEM132D antisense RNA 1 ncRNA chr13-3648 chr13 31674186 31674396 + 4.12 0.000 Intergenic Intergenic -65235 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr2-13786 chr2 172294290 172294500 + 4.12 0.000 Intergenic Intergenic -132941 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr7-9570 chr7 144897232 144897442 + 4.12 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -61284 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr7-7051 chr7 141085204 141085414 + 4.12 0.000 intron (NM_001195278, intron 1 of 3) intron (NM_001195278, intron 1 of 3) 11245 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr10-8771 chr10 104641168 104641378 + 4.12 0.000 promoter-TSS (NM_014978) promoter-TSS (NM_014978) -17 NM_014978 22986 Hs.671950 NM_014978 ENSG00000156395 SORCS3 SORCS sortilin related VPS10 domain containing receptor 3 protein-coding chr10-7766 chr10 34352860 34353070 + 4.12 0.000 intron (NM_001184789, intron 13 of 22) SVA_B|Retroposon|SVA 462331 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr6-6860 chr6 9933861 9934071 + 4.12 0.000 Intergenic Intergenic -470536 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr5-9118 chr5 174065310 174065520 + 4.12 0.000 intron (NM_015980, intron 3 of 4) L2|LINE|L2 19709 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr7-9684 chr7 153178919 153179129 + 4.12 0.000 Intergenic Intergenic 233210 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr17-6430 chr17 5307424 5307634 + 4.12 0.000 intron (NM_001291581, intron 1 of 16) intron (NM_001291581, intron 1 of 16) 25245 NM_001291581 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr12-7092 chr12 44384899 44385109 + 4.12 0.000 intron (NM_001286213, intron 6 of 6) intron (NM_001286213, intron 6 of 6) 490657 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr7-4852 chr7 104862616 104862826 + 4.12 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) -58629 NR_034141 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr22-3739 chr22 26270513 26270723 + 4.12 0.000 intron (NM_001184776, intron 1 of 14) intron (NM_001184776, intron 1 of 14) 101144 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr1-12561 chr1 29591695 29591905 + 4.12 0.000 Intergenic Intergenic -241686 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr8-5441 chr8 38127046 38127256 + 4.12 0.000 intron (NM_004674, intron 10 of 15) AluJb|SINE|Alu 21358 NM_001105214 9070 Hs.521530 NM_004674 ENSG00000129691 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ASH2 like, histone lysine methyltransferase complex subunit protein-coding chr5-8964 chr5 160578537 160578747 + 4.12 0.000 intron (NM_001366652, intron 23 of 24) L1PA7|LINE|L1 93290 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr19-4752 chr19 29243402 29243612 + 4.12 0.000 Intergenic Intergenic -30356 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr3-8356 chr3 78183687 78183897 + 4.12 0.000 Intergenic Intergenic -134829 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr20-3704 chr20 15665728 15665938 + 4.12 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 257481 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr4-5708 chr4 34243634 34243844 + 4.12 0.000 intron (NR_147184, intron 2 of 3) intron (NR_147184, intron 2 of 3) 26008 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr18-2766 chr18 848593 848803 + 4.12 0.000 Intergenic Intergenic -36456 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr16-4228 chr16 17804953 17805163 + 4.12 0.000 Intergenic Intergenic -334098 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr18-2445 chr18 31960313 31960523 + 4.12 0.000 Intergenic SVA_D|Retroposon|SVA -17290 NM_014939 22878 Hs.202001 NM_014939 ENSG00000153339 TRAPPC8 GSG1|HsT2706|KIAA1012|TRS85 trafficking protein particle complex 8 protein-coding chr18-3284 chr18 52777269 52777479 + 4.12 0.000 intron (NM_005215, intron 2 of 28) MLT1D|LTR|ERVL-MaLR 437177 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr1-12675 chr1 46577282 46577492 + 4.12 0.000 intron (NM_198973, intron 4 of 11) AluSx1|SINE|Alu -25730 NM_001322255 148930 Hs.350764 NM_182516 ENSG00000162456 KNCN Kino|L5 kinocilin protein-coding chr2-12731 chr2 81985335 81985545 + 4.12 0.000 Intergenic LTR12C|LTR|ERV1 -518494 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chrX-4368 chrX 49839055 49839265 + 4.12 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 9857 NM_007003 9506 Hs.441038 NM_007003 ENSG00000101951 PAGE4 CT16.7|GAGE-9|GAGEC1|JM-27|JM27|PAGE-1|PAGE-4 PAGE family member 4 protein-coding chrX-4386 chrX 51151286 51151496 + 4.12 0.000 intron (NR_110382, intron 1 of 8) ERV3-16A3_I-int|LTR|ERVL 20030 NR_110382 101926971 Hs.657995 NR_110382 ENSG00000230317 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA KI270821.1-1 KI270821.1 310715 310925 + 4.12 0.000 NA NA NA NA chr5-8855 chr5 152479777 152479987 + 4.12 0.000 Intergenic SVA_C|Retroposon|SVA -74603 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr1-15945 chr1 188377115 188377325 + 4.12 0.000 Intergenic MER2B|DNA|TcMar-Tigger 933592 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr5-8754 chr5 147026719 147026929 + 4.12 0.000 intron (NM_001271900, intron 2 of 10) L1ME2|LINE|L1 29313 NM_181676 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chrX-3656 chrX 100379343 100379553 + 4.12 0.000 intron (NM_020766, intron 2 of 4) intron (NM_020766, intron 2 of 4) 30825 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr19-6778 chr19 40877422 40877632 + 4.12 0.000 intron (NM_030589, intron 5 of 7) MamRep38|DNA|hAT 5225 NM_000764 1549 Hs.719890 NM_000764 ENSG00000198077 CYP2A7 CPA7|CPAD|CYP2A|CYPIIA7|P450-IIA4 cytochrome P450 family 2 subfamily A member 7 protein-coding KZ208918.1-1 KZ208918.1 170490 170700 + 4.12 0.000 NA NA NA NA chr11-8113 chr11 45189886 45190096 + 4.12 0.000 intron (NM_001256695, intron 4 of 7) L1MC4|LINE|L1 42648 NM_001256696 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr15-3727 chr15 54012871 54013081 + 4.12 0.000 exon (NM_001080534, exon 1 of 31) exon (NM_001080534, exon 1 of 31) 328 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr12-7236 chr12 51410251 51410461 + 4.12 0.000 intron (NM_001258401, intron 1 of 24) intron (NM_001258401, intron 1 of 24) -14475 NM_001258402 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr7-8610 chr7 67684757 67684967 + 4.12 0.000 Intergenic AluSq2|SINE|Alu -335391 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr11-7816 chr11 107183734 107183944 + 4.12 0.000 Intergenic MIRb|SINE|MIR -165363 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr10-4811 chr10 10620349 10620559 + 4.12 0.000 intron (NM_001326317, intron 1 of 14) AluSx3|SINE|Alu 157904 NM_001326318 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr10-4579 chr10 109447601 109447811 + 4.12 0.000 Intergenic Intergenic 475540 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr8-5395 chr8 26419347 26419557 + 4.12 0.000 Intergenic Intergenic 29039 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr5-5970 chr5 119096174 119096384 + 4.12 0.000 intron (NM_001290321, intron 1 of 43) AluSp|SINE|Alu 25192 NM_001290321 1657 Hs.181042 NM_005509 ENSG00000172869 DMXL1 - Dmx like 1 protein-coding chr5-8479 chr5 132747708 132747918 + 4.12 0.000 exon (NM_001287253, exon 1 of 6) exon (NM_001287253, exon 1 of 6) 368 NM_001287252 645121 Hs.522057 NM_001039780 ENSG00000205089 CCNI2 - cyclin I family member 2 protein-coding chr8-6590 chr8 71952225 71952435 + 4.12 0.000 intron (NR_033651, intron 1 of 2) L1MEh|LINE|L1 -107834 NM_005098 9242 Hs.442619 NM_005098 ENSG00000178860 MSC ABF-1|ABF1|MYOR|bHLHa22 musculin protein-coding chr10-6680 chr10 110458253 110458463 + 4.12 0.000 Intergenic L1ME3G|LINE|L1 -39549 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr2-11633 chr2 5195115 5195325 + 4.12 0.000 Intergenic MER57A1|LTR|ERV1 495898 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr10-8445 chr10 86315638 86315848 + 4.12 0.000 intron (NM_017551, intron 2 of 15) (TCCA)n|Simple_repeat|Simple_repeat -50955 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr1-9451 chr1 34742707 34742917 + 4.12 0.000 Intergenic Intergenic -12235 NM_005268 2709 Hs.198249 NM_005268 ENSG00000189280 GJB5 CX31.1 gap junction protein beta 5 protein-coding chr19-6328 chr19 10492284 10492494 + 4.12 0.000 intron (NM_012289, intron 2 of 5) MIR|SINE|MIR 10382 NM_012289 9817 Hs.465870 NM_012289 ENSG00000079999 KEAP1 INrf2|KLHL19 kelch like ECH associated protein 1 protein-coding chr5-6185 chr5 60094526 60094736 + 4.12 0.000 intron (NM_001349243, intron 2 of 16) MLT1B|LTR|ERVL-MaLR -200905 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr8-6980 chr8 107781779 107781989 + 4.12 0.000 Intergenic AluY|SINE|Alu -283966 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr18-2511 chr18 64287004 64287214 + 4.12 0.000 intron (NR_033881, intron 3 of 9) intron (NR_033881, intron 3 of 9) -27054 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA chr5-8686 chr5 141730985 141731195 + 4.12 0.000 Intergenic Intergenic -48860 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr2-8571 chr2 136305423 136305633 + 4.12 0.000 Intergenic Intergenic -187373 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr7-5144 chr7 5586531 5586741 + 4.12 0.000 Intergenic Intergenic -6180 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr1-8494 chr1 150383153 150383363 + 4.12 0.000 intron (NM_015203, intron 1 of 10) AluJr|SINE|Alu 19147 NM_015203 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding chr20-3133 chr20 35153938 35154148 + 4.12 0.000 intron (NM_001355008, intron 5 of 14) SVA_F|Retroposon|SVA -6707 NR_026728 55741 Hs.720177 NM_018217 ENSG00000088298 EDEM2 C20orf31|C20orf49|bA4204.1 ER degradation enhancing alpha-mannosidase like protein 2 protein-coding chr10-7404 chr10 3767622 3767832 + 4.12 0.000 Intergenic Intergenic 17482 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr15-5072 chr15 85824659 85824869 + 4.12 0.000 promoter-TSS (NR_049805) promoter-TSS (NR_049805) -871 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr6-8083 chr6 125051557 125051767 + 4.12 0.000 intron (NR_136734, intron 3 of 6) L3|LINE|CR1 68294 NM_152553 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr1-11857 chr1 36754591 36754801 + 4.12 0.000 Intergenic Intergenic -271382 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr15-5235 chr15 97105337 97105547 + 4.12 0.000 Intergenic Intergenic 322007 NR_158223 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr1-7750 chr1 34326660 34326870 + 4.12 0.000 Intergenic L2c|LINE|L2 149858 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr11-10252 chr11 101553544 101553754 + 4.12 0.000 intron (NM_004621, intron 1 of 12) intron (NM_004621, intron 1 of 12) 30358 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr4-7622 chr4 82662777 82662987 + 4.12 0.000 intron (NM_024906, intron 3 of 3) L1ME4a|LINE|L1 -41445 NR_024088 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr10-6332 chr10 119012710 119012920 + 4.12 0.000 Intergenic L1ME1|LINE|L1 -16899 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr4-7639 chr4 84039769 84039979 + 4.12 0.000 intron (NR_125909, intron 7 of 8) Arthur1B|DNA|hAT-Tip100 259295 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr5-5834 chr5 178948693 178948903 + 4.12 0.000 intron (NM_001178089, intron 4 of 4) intron (NM_001178089, intron 4 of 4) 7600 NM_001323308 285676 Hs.259441 NM_182594 ENSG00000178187 ZNF454 - zinc finger protein 454 protein-coding chr18-3158 chr18 42325457 42325667 + 4.12 0.000 intron (NR_046457, intron 4 of 6) MER4B|LTR|ERV1 138894 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chrX-3787 chrX 134564903 134565113 + 4.12 0.000 TTS (NM_021796) TTS (NM_021796) 14984 NR_038998 100506757 Hs.130961 NR_038998 LINC00629 LINC00629A|LINC00629B|LINC00629C|LINC00629D long intergenic non-protein coding RNA 629 ncRNA chr3-7845 chr3 114242523 114242733 + 4.12 0.000 Intergenic Intergenic -5050 NM_007136 7634 Hs.271079 NM_007136 ENSG00000174255 ZNF80 pT17 zinc finger protein 80 protein-coding chr7-7301 chr7 42315768 42315978 + 4.12 0.000 Intergenic Intergenic -78664 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chrX-3634 chrX 94708333 94708543 + 4.12 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 354788 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr8-1989 chr8 83131245 83131455 + 4.12 0.000 Intergenic Intergenic 219246 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr7-6819 chr7 36426602 36426812 + 4.12 0.000 intron (NM_001284302, intron 18 of 22) intron (NM_001284302, intron 18 of 22) -36350 NM_001100425 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr8-7221 chr8 126750014 126750224 + 4.12 0.000 Intergenic L1MA7|LINE|L1 -191641 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr5-7554 chr5 39080647 39080857 + 4.12 0.000 Intergenic Intergenic -6353 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr2-10967 chr2 88131081 88131291 + 4.12 0.000 Intergenic Intergenic -3124 NM_001443 2168 Hs.380135 NM_001443 ENSG00000163586 FABP1 FABPL|L-FABP fatty acid binding protein 1 protein-coding chr18-2529 chr18 75771472 75771682 + 4.12 0.000 Intergenic Intergenic -59174 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA chr5-4484 chr5 8723836 8724046 + 4.12 0.000 Intergenic THE1D|LTR|ERVL-MaLR -115791 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr11-10387 chr11 113321002 113321212 + 4.12 0.000 intron (NM_001318533, intron 2 of 21) L1ME3Cz|LINE|L1 6524 NM_001318533 54970 Hs.288772 NM_017868 ENSG00000149292 TTC12 TPARM tetratricopeptide repeat domain 12 protein-coding chr14-3995 chr14 36054491 36054701 + 4.12 0.000 Intergenic Intergenic -15831 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chrX-2693 chrX 119285564 119285774 + 4.12 0.000 Intergenic AluSz|SINE|Alu -5860 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr16-5526 chr16 24315293 24315503 + 4.12 0.000 intron (NM_006539, intron 1 of 3) intron (NM_006539, intron 1 of 3) 59845 NM_006539 10368 Hs.7235 NM_006539 ENSG00000006116 CACNG3 - calcium voltage-gated channel auxiliary subunit gamma 3 protein-coding chr14-5209 chr14 95982776 95982986 + 4.12 0.000 Intergenic Intergenic -56443 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr5-5901 chr5 36800608 36800818 + 4.12 0.000 Intergenic MSTB|LTR|ERVL-MaLR 75981 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA chr5-6925 chr5 137537807 137538017 + 4.12 0.000 Intergenic SVA_C|Retroposon|SVA -38586 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chrX-3438 chrX 20961898 20962108 + 4.12 0.000 Intergenic L1MA3|LINE|L1 -412415 NM_001330770 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr6-6407 chr6 83924018 83924228 + 4.12 0.000 intron (NM_016230, intron 9 of 15) intron (NM_016230, intron 9 of 15) 64434 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding chr6-6443 chr6 99649400 99649610 + 4.12 0.000 Intergenic (TTAT)n|Simple_repeat|Simple_repeat 42731 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr16-2539 chr16 18773260 18773470 + 4.12 0.000 Intergenic AluSq|SINE|Alu 16969 NM_001019 6210 Hs.370504 NM_001019 ENSG00000134419 RPS15A DBA20|S15a ribosomal protein S15a protein-coding chr2-10059 chr2 38407904 38408114 + 4.12 0.000 Intergenic Intergenic -23285 NR_146454 100996902 Hs.128280 NR_146454 ENSG00000235009 LINC01883 - long intergenic non-protein coding RNA 1883 ncRNA chr20-3871 chr20 29079099 29079309 + 4.12 0.000 Intergenic Intergenic -1186 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr15-3920 chr15 35103370 35103580 + 4.12 0.000 Intergenic Intergenic -18067 NM_001355281 388112 Hs.635882 NM_001355281 ENSG00000255192 NANOGP8 NANOGP1|PN8 Nanog homeobox retrogene P8 protein-coding chr14-2634 chr14 65456785 65456995 + 4.12 0.000 intron (NM_004480, intron 2 of 9) L1MA4|LINE|L1 -14212 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr14-3870 chr14 88321359 88321569 + 4.12 0.000 intron (NM_021161, intron 1 of 6) L2b|LINE|L2 1805 NM_138317 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr15-3555 chr15 26298114 26298324 + 4.12 0.000 Intergenic LTR12C|LTR|ERV1 182406 NR_038851 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr3-8379 chr3 94693823 94694033 + 4.12 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -244335 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr16-5072 chr16 76935222 76935432 + 4.12 0.000 Intergenic MER44A|DNA|TcMar-Tigger 66391 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr5-6348 chr5 136580438 136580648 + 4.12 0.000 Intergenic AluSp|SINE|Alu -215067 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr9-5008 chr9 23842809 23843019 + 4.12 0.000 intron (NM_001351456, intron 2 of 8) intron (NM_001351456, intron 2 of 8) 7687 NM_001351466 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding chr22-3215 chr22 39170958 39171168 + 4.12 0.000 Intergenic Intergenic -18383 NM_175709 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr16-5615 chr16 57846561 57846771 + 4.12 0.000 Intergenic Intergenic 36029 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding chr4-5573 chr4 161267354 161267564 + 4.12 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -755274 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr9-8204 chr9 108534843 108535053 + 4.12 0.000 Intergenic LTR33A|LTR|ERVL 321038 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr6-7161 chr6 37280778 37280988 + 4.12 0.000 intron (NR_130108, intron 3 of 12) intron (NR_130108, intron 3 of 12) -22728 NM_001286401 221468 Hs.520101 NM_145316 ENSG00000172738 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding chr5-9179 chr5 178504416 178504626 + 4.12 0.000 intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) 85872 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr14-3898 chr14 98155019 98155229 + 4.12 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -177000 NR_152747 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr2-10677 chr2 24169554 24169764 + 4.12 0.000 TTS (NM_001291328) TTS (NM_001291328) -5394 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr21-1661 chr21 26170316 26170526 + 4.12 0.000 intron (NM_001136131, intron 1 of 15) CpG 349 NM_201414 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr7-7033 chr7 134448760 134448970 + 4.12 0.000 intron (NM_001346142, intron 5 of 9) intron (NM_001346142, intron 5 of 9) 10235 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr3-9458 chr3 49636386 49636596 + 4.12 0.000 intron (NM_003458, intron 2 of 11) intron (NM_003458, intron 2 of 11) -37860 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr12-5867 chr12 50050237 50050447 + 4.12 0.000 Intergenic Intergenic -7254 NM_020039 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr5-8290 chr5 113985773 113985983 + 4.12 0.000 Intergenic Intergenic -376192 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr17-8186 chr17 62272958 62273168 + 4.12 0.000 intron (NR_027486, intron 3 of 13) intron (NR_027486, intron 3 of 13) 2592 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr11-10278 chr11 104031969 104032179 + 4.12 0.000 intron (NM_025208, intron 1 of 6) L1PA10|LINE|L1 -4566 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr1-11023 chr1 221074645 221074855 + 4.12 0.000 Intergenic Intergenic -194610 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr16-6712 chr16 71884357 71884567 + 4.12 0.000 promoter-TSS (NM_001201553) promoter-TSS (NM_001201553) -272 NM_001201556 55565 Hs.744055 NM_017530 ENSG00000102984 ZNF821 - zinc finger protein 821 protein-coding chr14-2490 chr14 100873281 100873491 + 4.12 0.000 Intergenic Intergenic -1107 NR_029889 442905 NR_029889 ENSG00000199151 MIR337 MIRN337|hsa-mir-337|mir-337 microRNA 337 ncRNA chr12-8283 chr12 125710689 125710899 + 4.12 0.000 Intergenic Intergenic 88342 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chrX-4933 chrX 110568706 110568916 + 4.12 0.000 Intergenic Intergenic 48499 NR_002718 6998 Hs.592361 NR_002718 ENSG00000225366 TDGF1P3 CR-3|CRIPTO|CRIPTO-3|CRIPTO3|TDGF1|TDGF2|TDGF3 teratocarcinoma-derived growth factor 1 pseudogene 3 pseudo chr7-7359 chr7 55842844 55843054 + 4.12 0.000 exon (NM_207366, exon 5 of 10) exon (NM_207366, exon 5 of 10) 19803 NM_207366 346288 Hs.453629 NM_207366 ENSG00000154997 SEPTIN14 SEPT14 septin 14 protein-coding chr3-7410 chr3 106609919 106610129 + 4.12 0.000 Intergenic Intergenic 630614 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr14-4462 chr14 34144288 34144498 + 4.12 0.000 Intergenic L1PA7|LINE|L1 -193319 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr15-4489 chr15 50899380 50899590 + 4.12 0.000 Intergenic Intergenic -9198 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr12-5731 chr12 124113235 124113445 + 4.12 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 140125 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr4-6530 chr4 169909866 169910076 + 4.12 0.000 Intergenic Intergenic 65931 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr12-6654 chr12 936175 936385 + 4.12 0.000 intron (NM_001297419, intron 1 of 11) AluSx|SINE|Alu -3204 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr10-8891 chr10 114086546 114086756 + 4.12 0.000 Intergenic Intergenic 42785 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr2-10507 chr2 228346395 228346605 + 4.12 0.000 Intergenic Intergenic -164813 NM_001142644 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr17-7502 chr17 17005164 17005374 + 4.12 0.000 Intergenic Intergenic 16940 NR_146886 105371562 Hs.579259 NR_146886 ENSG00000230969 LINC02090 - long intergenic non-protein coding RNA 2090 ncRNA chr4-7444 chr4 68147945 68148155 + 4.12 0.000 Intergenic L1PA10|LINE|L1 -18181 NM_207407 389208 Hs.677557 NM_207407 ENSG00000198092 TMPRSS11F - transmembrane serine protease 11F protein-coding chrX-3183 chrX 40154701 40154911 + 4.12 0.000 intron (NM_001123384, intron 1 of 13) CpG 22471 NM_001123384 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr3-7445 chr3 126677247 126677457 + 4.12 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 15271 NR_034158 255330 Hs.145435 NM_174935 ENSG00000198284 NUP210P1 C3orf46 nucleoporin 210 pseudogene 1 pseudo chr3-8856 chr3 9672528 9672738 + 4.12 0.000 intron (NM_001077525, intron 6 of 18) (GT)n|Simple_repeat|Simple_repeat 23128 NM_001077526 64419 Hs.475382 NM_022485 ENSG00000163719 MTMR14 C3orf29 myotubularin related protein 14 protein-coding chr1-8725 chr1 232369576 232369786 + 4.12 0.000 Intergenic L3|LINE|CR1 145927 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr12-6776 chr12 8625265 8625475 + 4.12 0.000 Intergenic SVA_D|Retroposon|SVA -12511 NM_001330343 57379 Hs.149342 NM_020661 ENSG00000111732 AICDA AID|ARP2|CDA2|HEL-S-284|HIGM2 activation induced cytidine deaminase protein-coding chr5-8856 chr5 152790224 152790434 + 4.12 0.000 intron (NR_109877, intron 3 of 4) L1PA6|LINE|L1 182020 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr11-8657 chr11 3454996 3455206 + 4.12 0.000 Intergenic HERVK-int|LTR|ERVK -63186 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr4-6177 chr4 41792309 41792519 + 4.12 0.000 Intergenic MER91B|DNA|hAT-Tip100 -43444 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding chr6-7592 chr6 75113548 75113758 + 4.12 0.000 exon (NM_004370, exon 50 of 66) exon (NM_004370, exon 50 of 66) 15129 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr1-12956 chr1 152949107 152949317 + 4.12 0.000 Intergenic Intergenic -21436 NM_173080 163778 Hs.433629 NM_173080 ENSG00000184148 SPRR4 - small proline rich protein 4 protein-coding chr1-11786 chr1 23987109 23987319 + 4.12 0.000 Intergenic SVA_C|Retroposon|SVA -6751 NR_034035 10772 Hs.3530 NM_006625 ENSG00000188529 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine and arginine rich splicing factor 10 protein-coding chr1-15902 chr1 184150817 184151027 + 4.12 0.000 Intergenic Intergenic 99192 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr21-1481 chr21 37905038 37905248 + 4.12 0.000 intron (NM_002240, intron 1 of 3) intron (NM_002240, intron 1 of 3) 11314 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr6-8250 chr6 137697488 137697698 + 4.12 0.000 Intergenic Intergenic 31947 NR_125867 102723649 Hs.129235 NR_125867 LOC102723649 - uncharacterized LOC102723649 ncRNA chr5-7085 chr5 176615286 176615496 + 4.12 0.000 Intergenic AluJo|SINE|Alu -5235 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr16-5984 chr16 5084913 5085123 + 4.12 0.000 3' UTR (NM_001330504, exon 13 of 13) 3' UTR (NM_001330504, exon 13 of 13) 12770 NM_001330504 56052 Hs.592086 NM_019109 ENSG00000033011 ALG1 CDG1K|HMAT1|HMT-1|HMT1|MT-1|Mat-1|hMat-1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase protein-coding chr10-7266 chr10 127416943 127417153 + 4.12 0.000 intron (NM_001290223, intron 44 of 51) intron (NM_001290223, intron 44 of 51) -132301 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr6-5631 chr6 63496438 63496648 + 4.12 0.000 Intergenic Intergenic -75469 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr16-2777 chr16 26112180 26112390 + 4.12 0.000 intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) 87048 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr5-6045 chr5 173234718 173234928 + 4.12 0.000 exon (NM_004387, exon 1 of 2) exon (NM_004387, exon 1 of 2) 383 NM_001166175 1482 Hs.54473 NM_004387 ENSG00000183072 NKX2-5 CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3 NK2 homeobox 5 protein-coding chr1-11419 chr1 61131584 61131794 + 4.12 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 49128 NM_005595 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr13-3901 chr13 53921529 53921739 + 4.12 0.000 Intergenic MER52A|LTR|ERV1 106215 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr1-8130 chr1 10783864 10784074 + 4.12 0.000 intron (NM_001079843, intron 1 of 20) MIRb|SINE|MIR 12677 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr2-10613 chr2 8528538 8528748 + 4.12 0.000 Intergenic Intergenic 55149 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr15-5086 chr15 87590921 87591131 + 4.12 0.000 Intergenic Intergenic 14097 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr17-8082 chr17 55126582 55126792 + 4.12 0.000 intron (NM_178509, intron 16 of 17) intron (NM_178509, intron 16 of 17) -138273 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr7-7686 chr7 155427958 155428168 + 4.12 0.000 Intergenic Intergenic -30066 NM_001427 2020 Hs.134989 NM_001427 ENSG00000164778 EN2 - engrailed homeobox 2 protein-coding chr19-5937 chr19 52425745 52425955 + 4.12 0.000 Intergenic Intergenic -3298 NM_001351679 147658 Hs.447583 NM_182512 ENSG00000198633 ZNF534 KRBO3 zinc finger protein 534 protein-coding chr10-6211 chr10 43502901 43503111 + 4.12 0.000 Intergenic AluJb|SINE|Alu 65453 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding chr17-7892 chr17 43517938 43518148 + 4.12 0.000 non-coding (NR_136225, exon 19 of 24) non-coding (NR_136225, exon 19 of 24) 12392 NM_001261439 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr16-6122 chr16 19167697 19167907 + 4.12 0.000 promoter-TSS (NM_001330509) promoter-TSS (NM_001330509) -32 NM_001330509 51760 Hs.258326 NM_016524 ENSG00000103528 SYT17 sytXVII synaptotagmin 17 protein-coding chr1-9511 chr1 38455974 38456184 + 4.12 0.000 Intergenic Intergenic -19117 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr3-10090 chr3 109786847 109787057 + 4.12 0.000 Intergenic Intergenic 184124 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr2-13957 chr2 187134641 187134851 + 4.12 0.000 Intergenic Intergenic -285576 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr2-10809 chr2 47724832 47725042 + 4.12 0.000 Intergenic Intergenic -58145 NM_001281492 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr12-7480 chr12 65825214 65825424 + 4.12 0.000 exon (NM_001330190, exon 1 of 4) exon (NM_001330190, exon 1 of 4) 859 NM_001330190 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding chr14-3647 chr14 75379722 75379932 + 4.12 0.000 Intergenic LTR32|LTR|ERVL -47897 NM_001135047 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chr12-4877 chr12 63285831 63286041 + 4.12 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR -133126 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr14-4580 chr14 49705190 49705400 + 4.12 0.000 intron (NM_172193, intron 1 of 12) intron (NM_172193, intron 1 of 12) 12175 NM_172193 122773 Hs.509258 NM_172193 ENSG00000197776 KLHDC1 MST025 kelch domain containing 1 protein-coding chr6-2803 chr6 150520624 150520834 + 4.12 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -79156 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr13-3308 chr13 52851131 52851341 + 4.12 0.000 Intergenic CpG -2596 NM_002590 5100 Hs.19492 NM_002590 ENSG00000136099 PCDH8 ARCADLIN|PAPC protocadherin 8 protein-coding chr16-6671 chr16 69741751 69741961 + 4.12 0.000 TTS (NM_014062) TTS (NM_014062) 13070 NM_014062 28987 Hs.271695 NM_014062 ENSG00000141101 NOB1 ART-4|MST158|MSTP158|NOB1P|PSMD8BP1 NIN1 (RPN12) binding protein 1 homolog protein-coding chr11-9431 chr11 60654569 60654779 + 4.12 0.000 intron (NR_026946, intron 5 of 6) ERVL-int|LTR|ERVL 38923 NR_026946 283197 Hs.372650 NM_174939 ENSG00000181995 LINC00301 C11orf64|NCRNA00301 long intergenic non-protein coding RNA 301 ncRNA chr6-5408 chr6 155228418 155228628 + 4.12 0.000 intron (NM_001010927, intron 1 of 12) intron (NM_001010927, intron 1 of 12) 11557 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr3-9647 chr3 60526397 60526607 + 4.12 0.000 intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) 91368 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr2-14271 chr2 215169380 215169590 + 4.12 0.000 Intergenic LTR107_Mam|LTR|LTR -30859 NR_103740 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr8-5470 chr8 43556925 43557135 + 4.12 0.000 Intergenic HERVS71-int|LTR|ERV1 264588 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr1-7662 chr1 11691348 11691558 + 4.12 0.000 promoter-TSS (NM_198545) promoter-TSS (NM_198545) 168 NM_001127325 10459 Hs.19400 NM_006341 ENSG00000116670 MAD2L2 FANCV|MAD2B|POLZ2|REV7 mitotic arrest deficient 2 like 2 protein-coding chr7-3401 chr7 130626315 130626525 + 4.12 0.000 intron (NM_001290033, intron 5 of 19) AluSq4|SINE|Alu 42328 NM_012133 26958 Hs.6421 NM_012133 ENSG00000158623 COPG2 2-COP|gamma-2-COP coatomer protein complex subunit gamma 2 protein-coding chr5-8733 chr5 145500894 145501104 + 4.12 0.000 Intergenic Intergenic 334343 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr10-4373 chr10 37311165 37311375 + 4.12 0.000 intron (NR_104061, intron 1 of 4) intron (NR_104061, intron 1 of 4) 2084 NR_104061 101929520 Hs.144151 NR_104061 ENSG00000235687 LINC00993 - long intergenic non-protein coding RNA 993 ncRNA chr12-5508 chr12 128790205 128790415 + 4.12 0.000 Intergenic Intergenic 33648 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr10-4081 chr10 50662326 50662536 + 4.12 0.000 Intergenic Intergenic 37480 NR_126411 104355295 Hs.450493 NR_126411 SGMS1-AS1 - SGMS1 antisense RNA 1 ncRNA chrX-1723 chrX 27873416 27873626 + 4.12 0.000 Intergenic AluSx1|SINE|Alu 65531 NM_182506 139422 Hs.447363 NM_182506 ENSG00000177689 MAGEB10 - MAGE family member B10 protein-coding chr17-8244 chr17 65848517 65848727 + 4.12 0.000 intron (NM_001353129, intron 21 of 26) intron (NM_001353129, intron 21 of 26) -22079 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chrX-1849 chrX 110071621 110071831 + 4.12 0.000 intron (NM_001353850, intron 3 of 7) AluJr|SINE|Alu -10392 NR_039774 100616491 NR_039774 ENSG00000265584 MIR3978 - microRNA 3978 ncRNA chr1-16538 chr1 232553387 232553597 + 4.12 0.000 Intergenic LTR1F1|LTR|ERV1 -37884 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr9-7509 chr9 32799308 32799518 + 4.12 0.000 Intergenic AluJb|SINE|Alu 15873 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr14-4049 chr14 55744891 55745101 + 4.12 0.000 Intergenic Intergenic -21249 NR_004844 645683 Hs.663461 NR_004844 ENSG00000177350 RPL13AP3 RPL13A_11_1370 ribosomal protein L13a pseudogene 3 pseudo chr10-8135 chr10 70326359 70326569 + 4.12 0.000 intron (NR_103467, intron 1 of 2) L2c|LINE|L2 -42460 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr7-6573 chr7 73769698 73769908 + 4.12 0.000 exon (NM_001306, exon 1 of 1) exon (NM_001306, exon 1 of 1) 467 NM_001306 1365 Hs.647023 NM_001306 ENSG00000165215 CLDN3 C7orf1|CPE-R2|CPETR2|HRVP1|RVP1 claudin 3 protein-coding chr1-11807 chr1 27381249 27381459 + 4.12 0.000 intron (NM_207397, intron 4 of 4) intron (NM_207397, intron 4 of 4) 1979 NM_001330448 388611 Hs.664836 NM_207397 ENSG00000174950 CD164L2 EAPG6122|UNQ6122 CD164 molecule like 2 protein-coding chr1-13321 chr1 240647646 240647856 + 4.12 0.000 Intergenic Intergenic -35596 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr12-5791 chr12 13769959 13770169 + 4.12 0.000 intron (NM_000834, intron 2 of 12) intron (NM_000834, intron 2 of 12) 210292 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr1-12949 chr1 151407979 151408189 + 4.12 0.000 intron (NM_001194938, intron 14 of 17) intron (NM_001194938, intron 14 of 17) 8511 NM_002796 5692 Hs.89545 NM_002796 ENSG00000159377 PSMB4 HN3|HsN3|PRAAS3|PROS-26|PROS26 proteasome subunit beta 4 protein-coding chr3-8718 chr3 191317027 191317237 + 4.12 0.000 intron (NM_198152, intron 2 of 8) LTR12C|LTR|ERV1 -12262 NM_178335 152137 Hs.478682 NM_174908 ENSG00000152492 CCDC50 C3orf6|DFNA44|YMER coiled-coil domain containing 50 protein-coding chr10-7637 chr10 24333611 24333821 + 4.12 0.000 intron (NM_019590, intron 2 of 20) intron (NM_019590, intron 2 of 20) 58031 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr5-1930 chr5 177812793 177813003 + 4.12 0.000 Intergenic Intergenic -3391 NR_157842 105377752 NR_157842 LOC105377752 - FAM83G pseudogene pseudo chr3-8048 chr3 753692 753902 + 4.12 0.000 intron (NR_110118, intron 2 of 3) L1MA4A|LINE|L1 161692 NR_110118 101927215 Hs.650700 NR_110118 ENSG00000224957 LINC01266 - long intergenic non-protein coding RNA 1266 ncRNA chr20-3742 chr20 18727157 18727367 + 4.12 0.000 intron (NM_080820, intron 4 of 5) intron (NM_080820, intron 4 of 5) -28554 NR_109955 101929526 Hs.639402 NR_109955 ENSG00000233993 LOC101929526 - uncharacterized LOC101929526 ncRNA chr2-11702 chr2 9614600 9614810 + 4.12 0.000 intron (NM_006826, intron 2 of 5) intron (NM_006826, intron 2 of 5) 16292 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr8-3895 chr8 38633318 38633528 + 4.12 0.000 Intergenic AluJo|SINE|Alu -32166 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr6-7969 chr6 113338929 113339139 + 4.12 0.000 Intergenic Intergenic 94413 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr8-5017 chr8 6165280 6165490 + 4.12 0.000 Intergenic AluY|SINE|Alu 241163 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr8-5995 chr8 22289587 22289797 + 4.12 0.000 intron (NM_001330480, intron 8 of 21) intron (NM_001330480, intron 8 of 21) 14125 NM_001135721 55124 Hs.614809 NM_018068 ENSG00000197181 PIWIL2 CT80|HILI|PIWIL1L|mili piwi like RNA-mediated gene silencing 2 protein-coding chr11-5500 chr11 82031402 82031612 + 4.12 0.000 intron (NR_120571, intron 5 of 7) intron (NR_120571, intron 5 of 7) -140671 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr2-6442 chr2 155413465 155413675 + 4.12 0.000 Intergenic AluSz6|SINE|Alu 714875 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr7-8218 chr7 32800449 32800659 + 4.12 0.000 Intergenic LTR13|LTR|ERVK -25748 NR_132360 102724668 Hs.636806 NR_132360 DPY19L1P2 THC1072510 DPY19L1 pseudogene 2 pseudo chr2-10873 chr2 65244584 65244794 + 4.12 0.000 intron (NM_001005386, intron 3 of 9) AluJb|SINE|Alu 16994 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr1-16477 chr1 228823254 228823464 + 4.12 0.000 Intergenic MLT2B3|LTR|ERVL 87880 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr14-4196 chr14 90265691 90265901 + 4.12 0.000 intron (NM_002802, intron 7 of 10) AluJb|SINE|Alu 7857 NM_001330212 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr8-6357 chr8 52606721 52606931 + 4.12 0.000 Intergenic Intergenic -41396 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr8-5971 chr8 21207131 21207341 + 4.12 0.000 Intergenic Intergenic -91003 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA chr1-14626 chr1 56360030 56360240 + 4.12 0.000 Intergenic L3|LINE|CR1 -54828 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr4-8595 chr4 169865632 169865842 + 4.12 0.000 Intergenic L1MEd|LINE|L1 -107793 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr1-12216 chr1 205848508 205848718 + 4.12 0.000 intron (NM_152491, intron 1 of 12) MamTip2|DNA|hAT-Tip100 1519 NR_135186 148811 Hs.177744 NM_152491 ENSG00000162877 PM20D1 Cps1 peptidase M20 domain containing 1 protein-coding chr5-6929 chr5 137894836 137895046 + 4.12 0.000 intron (NM_001300921, intron 4 of 14) intron (NM_001300921, intron 4 of 14) 5484 NM_001258449 27039 Hs.716884 NM_014386 ENSG00000078795 PKD2L2 TRPP5 polycystin 2 like 2, transient receptor potential cation channel protein-coding chr6-8343 chr6 147731008 147731218 + 4.12 0.000 Intergenic MIR|SINE|MIR 222423 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr1-8646 chr1 204377919 204378129 + 4.12 0.000 Intergenic CpG -8305 NR_027022 127841 Hs.213144 NR_027022 ENSG00000280924 LINC00628 - long intergenic non-protein coding RNA 628 ncRNA chr4-8662 chr4 178491704 178491914 + 4.12 0.000 Intergenic L1MA6|LINE|L1 -583873 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr1-16388 chr1 222989702 222989912 + 4.12 0.000 intron (NM_001369594, intron 3 of 7) AluSc8|SINE|Alu 61383 NM_001369594 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr1-14907 chr1 83723570 83723780 + 4.12 0.000 intron (NR_119375, intron 2 of 2) LTR32|LTR|ERVL 136871 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr3-10973 chr3 177705946 177706156 + 4.12 0.000 intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -110814 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr19-6683 chr19 35292065 35292275 + 4.12 0.000 promoter-TSS (NM_080600) promoter-TSS (NM_080600) 9 NM_002361 4099 Hs.643440 NM_002361 ENSG00000105695 MAG GMA|S-MAG|SIGLEC-4A|SIGLEC4A|SPG75 myelin associated glycoprotein protein-coding chr6-6548 chr6 132909749 132909959 + 4.12 0.000 Intergenic Intergenic 92635 NR_002436 594839 Hs.671378 NR_002436 ENSG00000200534 SNORA33 ACA33 small nucleolar RNA, H/ACA box 33 snoRNA chr17-7322 chr17 5248155 5248365 + 4.12 0.000 Intergenic Intergenic -13400 NM_207103 388325 Hs.462080 NM_207103 ENSG00000161929 SCIMP C17orf87|UNQ5783 SLP adaptor and CSK interacting membrane protein protein-coding chr5-8709 chr5 142810074 142810284 + 4.12 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 38952 NM_001349547 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr12-7245 chr12 51621580 51621790 + 4.12 0.000 intron (NM_001369788, intron 1 of 25) intron (NM_001369788, intron 1 of 25) 30449 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr1-15215 chr1 110739162 110739372 + 4.12 0.000 Intergenic MER58A|DNA|hAT-Charlie -64327 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding chrX-3523 chrX 48911759 48911969 + 4.12 0.000 promoter-TSS (NM_001042498) promoter-TSS (NM_001042498) 94 NM_001282648 7355 Hs.21899 NM_005660 ENSG00000102100 SLC35A2 CDG2M|CDGX|UDP-Gal-Tr|UGALT|UGAT|UGT|UGT1|UGT2|UGTL solute carrier family 35 member A2 protein-coding chr21-1304 chr21 44733182 44733392 + 4.12 0.000 Intergenic MER21C|LTR|ERVL -21715 NM_001272037 54084 Hs.660703 NM_144991 ENSG00000175894 TSPEAR C21orf29|DFNB98|ECTD14|TSP-EAR thrombospondin type laminin G domain and EAR repeats protein-coding chr1-14094 chr1 30540502 30540712 + 4.12 0.000 Intergenic MER115|DNA|hAT-Tip100 -178165 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr8-6130 chr8 29127034 29127244 + 4.12 0.000 exon (NM_015254, exon 25 of 40) exon (NM_015254, exon 25 of 40) 135931 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr1-12558 chr1 29443022 29443232 + 4.12 0.000 Intergenic L2c|LINE|L2 -93013 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr3-7742 chr3 56584198 56584408 + 4.12 0.000 intron (NR_148375, intron 7 of 17) SVA_C|Retroposon|SVA 27128 NM_001141947 285331 Hs.476399 NM_001012506 ENSG00000180376 CCDC66 - coiled-coil domain containing 66 protein-coding chr16-6172 chr16 25145741 25145951 + 4.12 0.000 intron (NR_039998, intron 2 of 2) PRIMA41-int|LTR|ERV1 3186 NR_039998 100506655 Hs.657576 NR_039998 ENSG00000260034 LCMT1-AS2 - LCMT1 antisense RNA 2 ncRNA chr4-5509 chr4 87236442 87236652 + 4.12 0.000 Intergenic Intergenic -15929 NR_120447 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr15-4826 chr15 73531014 73531224 + 4.12 0.000 intron (NM_001348772, intron 2 of 4) intron (NM_001348772, intron 2 of 4) 38424 NR_103844 101241892 Hs.656678 NR_103844 ENSG00000281183 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1 ncRNA chr18-3046 chr18 28313993 28314203 + 4.12 0.000 Intergenic MIRb|SINE|MIR -136968 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr5-7674 chr5 54873803 54874013 + 4.12 0.000 Intergenic LTR16A1|LTR|ERVL 111685 NM_001135604 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr5-7174 chr5 5301493 5301703 + 4.12 0.000 intron (NM_139056, intron 18 of 22) intron (NM_139056, intron 18 of 22) -121079 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr13-3929 chr13 58958006 58958216 + 4.12 0.000 Intergenic LTR12C|LTR|ERV1 -724994 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr4-2511 chr4 35625597 35625807 + 4.12 0.000 Intergenic Intergenic 618237 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr18-3253 chr18 49861601 49861811 + 4.12 0.000 intron (NM_001080467, intron 29 of 39) MIR3|SINE|MIR 47683 NR_003003 677769 NR_003003 ENSG00000267322 SCARNA17 U91 small Cajal body-specific RNA 17 ncRNA chr13-3897 chr13 53594554 53594764 + 4.12 0.000 Intergenic Intergenic -220760 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr2-13712 chr2 166876524 166876734 + 4.12 0.000 Intergenic Intergenic -11858 NM_152381 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr10-7851 chr10 46263028 46263238 + 4.12 0.000 intron (NR_103828, intron 1 of 2) intron (NR_103828, intron 1 of 2) 6475 NR_103827 100996567 Hs.546758 NR_103827 ANTXRLP1 - ANTXR like pseudogene 1 pseudo chr18-3479 chr18 71402412 71402622 + 4.12 0.000 Intergenic Intergenic 176439 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chrX-4929 chrX 110396896 110397106 + 4.12 0.000 intron (NM_001171689, intron 2 of 7) intron (NM_001171689, intron 2 of 7) -22056 NM_020769 57529 Hs.201071 NM_020769 ENSG00000243978 RTL9 MAR9|MART9|RGAG1|SIRH10 retrotransposon Gag like 9 protein-coding chr1-9031 chr1 11963559 11963769 + 4.12 0.000 intron (NM_001316320, intron 12 of 19) intron (NM_001316320, intron 12 of 19) -16517 NM_014874 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chrX-2991 chrX 42839852 42840062 + 4.12 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -61794 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr12-7713 chr12 91211792 91212002 + 4.12 0.000 Intergenic Intergenic -29080 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr2-13347 chr2 134981705 134981915 + 4.12 0.000 intron (NM_001282883, intron 6 of 7) MIRb|SINE|MIR 41839 NM_001321177 80122 Hs.659395 NM_025052 ENSG00000176601 MAP3K19 RCK|YSK4 mitogen-activated protein kinase kinase kinase 19 protein-coding chr8-4681 chr8 139172510 139172720 + 4.12 0.000 Intergenic (TAGTAAT)n|Simple_repeat|Simple_repeat -258574 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr12-6933 chr12 25759843 25760053 + 4.12 0.000 Intergenic L1ME1|LINE|L1 -111370 NM_001352234 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr13-3205 chr13 19652723 19652933 + 4.12 0.000 intron (NM_017520, intron 5 of 13) L1P3|LINE|L1 19169 NM_017520 54737 Hs.269654 NM_017520 ENSG00000196199 MPHOSPH8 HSMPP8|TWA3|mpp8 M-phase phosphoprotein 8 protein-coding chr21-1742 chr21 34657833 34658043 + 4.12 0.000 Intergenic Intergenic -11056 NM_053277 54102 Hs.473695 NM_053277 ENSG00000159212 CLIC6 CLIC1L chloride intracellular channel 6 protein-coding chrX-5019 chrX 119362321 119362531 + 4.12 0.000 Intergenic SVA_D|Retroposon|SVA -36910 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr11-9259 chr11 43629564 43629774 + 4.12 0.000 Intergenic Intergenic 48275 NR_029697 406918 NR_029697 ENSG00000199077 MIR129-2 MIR-129b|MIRN129-2|mir-129-2 microRNA 129-2 ncRNA chr10-5002 chr10 32547214 32547424 + 4.12 0.000 intron (NR_109826, intron 13 of 16) AluJr|SINE|Alu 101179 NR_109826 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding chr14-4424 chr14 32003878 32004088 + 4.12 0.000 Intergenic AluSx|SINE|Alu 59130 NR_146544 105370439 NR_146544 ENSG00000258474 LINC02313 - long intergenic non-protein coding RNA 2313 ncRNA chr8-5474 chr8 46893483 46893693 + 4.12 0.000 Intergenic MER99|DNA|hAT? 52702 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr17-6267 chr17 38843771 38843981 + 4.12 0.000 Intergenic AluSp|SINE|Alu -2487 NM_001080465 388381 Hs.250182 NM_001080465 ENSG00000275489 C17orf98 - chromosome 17 open reading frame 98 protein-coding chr8-6448 chr8 61196006 61196216 + 4.12 0.000 Intergenic Intergenic -91859 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 C6orf212L|CRALBPL|RLBP1L1 clavesin 1 protein-coding chr22-1487 chr22 30711646 30711856 + 4.12 0.000 intron (NM_030758, intron 1 of 13) AluJb|SINE|Alu 16877 NM_030758 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chrX-3234 chrX 67223381 67223591 + 4.12 0.000 Intergenic L1PA7|LINE|L1 -320535 NM_000044 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding chr4-8094 chr4 124625741 124625951 + 4.12 0.000 Intergenic MamGypLTR1c|LTR|Gypsy -67412 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr12-6729 chr12 5628913 5629123 + 4.12 0.000 intron (NM_001278596, intron 17 of 25) intron (NM_001278596, intron 17 of 25) 134886 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr9-7818 chr9 81711072 81711282 + 4.12 0.000 intron (NR_109772, intron 1 of 3) SVA_F|Retroposon|SVA 21464 NR_109772 101927502 Hs.528628 NR_109772 ENSG00000233926 LOC101927502 - uncharacterized LOC101927502 ncRNA chr20-3276 chr20 5488920 5489130 + 4.12 0.000 Intergenic ERVL-E-int|LTR|ERVL 15571 NR_015406 149837 Hs.123609 NR_015406 ENSG00000205181 LINC00654 - long intergenic non-protein coding RNA 654 ncRNA chr7-9290 chr7 126426233 126426443 + 4.12 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 631846 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr3-11106 chr3 185943423 185943633 + 4.12 0.000 Intergenic LTR41|LTR|ERVL -5514 NM_001243879 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr2-11767 chr2 12596633 12596843 + 4.12 0.000 Intergenic Intergenic -120134 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr8-6931 chr8 103470833 103471043 + 4.12 0.000 Intergenic A-rich|Low_complexity|Low_complexity 28293 NR_145704 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA chr7-8888 chr7 92030489 92030699 + 4.12 0.000 intron (NM_147185, intron 15 of 49) AluSc8|SINE|Alu 89719 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr4-7400 chr4 63478813 63479023 + 4.12 0.000 Intergenic L1MDa|LINE|L1 930532 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr2-13692 chr2 165155551 165155761 + 4.12 0.000 intron (NM_006922, intron 10 of 27) AluJb|SINE|Alu 48394 NM_006922 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr1-14802 chr1 71819779 71819989 + 4.12 0.000 intron (NR_046218, intron 1 of 2) ERV3-16A3_I-int|LTR|ERVL 17128 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr16-2553 chr16 56632389 56632599 + 4.12 0.000 promoter-TSS (NM_176870) promoter-TSS (NM_176870) -165 NM_176870 4499 Hs.647370 NM_176870 ENSG00000205364 MT1M MT-1M|MT-IM|MT1|MT1K metallothionein 1M protein-coding chr2-13763 chr2 170793893 170794103 + 4.12 0.000 intron (NM_001289947, intron 3 of 4) L1MEg|LINE|L1 10207 NM_001289947 285141 Hs.443729 NM_001289947 ENSG00000204334 ERICH2 - glutamate rich 2 protein-coding chr5-8382 chr5 123629141 123629351 + 4.12 0.000 Intergenic L1PA13|LINE|L1 83829 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr21-1801 chr21 38912247 38912457 + 4.12 0.000 intron (NR_120405, intron 2 of 3) intron (NR_120405, intron 2 of 3) 26077 NR_120405 400867 Hs.689509 NR_120405 LOC400867 - uncharacterized LOC400867 ncRNA chr4-4729 chr4 92199129 92199339 + 4.12 0.000 Intergenic L1MC4a|LINE|L1 78068 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA chr1-7550 chr1 197810675 197810885 + 4.12 0.000 Intergenic AluSq4|SINE|Alu -35300 NM_144977 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr3-9429 chr3 48796328 48796538 + 4.12 0.000 intron (NM_001321982, intron 2 of 11) intron (NM_001321982, intron 2 of 11) 51441 NM_001321989 5576 Hs.631923 NM_004157 ENSG00000114302 PRKAR2A PKR2|PRKAR2 protein kinase cAMP-dependent type II regulatory subunit alpha protein-coding chr4-6746 chr4 5499575 5499785 + 4.12 0.000 3' UTR (NM_018401, exon 12 of 12) 3' UTR (NM_018401, exon 12 of 12) -24889 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr7-8020 chr7 18704141 18704351 + 4.12 0.000 intron (NM_058176, intron 11 of 22) intron (NM_058176, intron 11 of 22) 194976 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr13-3052 chr13 31175811 31176021 + 4.12 0.000 Intergenic Intergenic -13528 NM_001286504 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr3-7679 chr3 40584624 40584834 + 4.12 0.000 Intergenic Intergenic 59769 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr6-6676 chr6 165443017 165443227 + 4.12 0.000 intron (NM_006661, intron 6 of 22) AluSx|SINE|Alu -133517 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr16-4310 chr16 28896718 28896928 + 4.12 0.000 intron (NM_173201, intron 12 of 21) AluSz6|SINE|Alu 16780 NM_001286075 487 Hs.657344 NM_004320 ENSG00000196296 ATP2A1 ATP2A|SERCA1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 protein-coding chr5-6723 chr5 72510850 72511060 + 4.12 0.000 Intergenic Intergenic -3545 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr3-8176 chr3 38583686 38583896 + 4.12 0.000 intron (NM_198056, intron 16 of 27) intron (NM_198056, intron 16 of 27) 65881 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr4-7276 chr4 48570837 48571047 + 4.12 0.000 intron (NM_015030, intron 26 of 63) intron (NM_015030, intron 26 of 63) 80690 NM_175619 326340 Hs.276457 NM_175619 ENSG00000182223 ZAR1 Z3CXXC6 zygote arrest 1 protein-coding chr13-3267 chr13 39542562 39542772 + 4.12 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 60526 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr3-9143 chr3 32085045 32085255 + 4.12 0.000 Intergenic THE1B|LTR|ERVL-MaLR -21361 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chr10-9130 chr10 127788259 127788469 + 4.12 0.000 Intergenic Intergenic 51179 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr12-3205 chr12 54488177 54488387 + 4.12 0.000 Intergenic SVA_D|Retroposon|SVA -9470 NM_005337 3071 Hs.182014 NM_005337 ENSG00000123338 NCKAP1L HEM1 NCK associated protein 1 like protein-coding chr5-7789 chr5 64248838 64249048 + 4.12 0.000 intron (NM_001113561, intron 5 of 7) L1PA7|LINE|L1 83100 NM_001113561 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr15-2683 chr15 78966109 78966319 + 4.12 0.000 intron (NM_001145648, intron 26 of 26) intron (NM_001145648, intron 26 of 26) -12675 NR_148998 100129540 Hs.459035 NR_148998 ENSG00000177699 LOC100129540 - uncharacterized LOC100129540 ncRNA chr13-3327 chr13 62800074 62800284 + 4.12 0.000 intron (NR_120403, intron 1 of 2) MER52A|LTR|ERV1 -3487 NR_120404 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr10-7060 chr10 86135238 86135448 + 4.12 0.000 intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 129445 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr7-6533 chr7 42888167 42888377 + 4.12 0.000 Intergenic Intergenic 23571 NM_001363436 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr17-8064 chr17 51403097 51403307 + 4.12 0.000 Intergenic Intergenic -32225 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr3-10487 chr3 135308526 135308736 + 4.12 0.000 Intergenic Intergenic 513371 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr16-3524 chr16 29571671 29571881 + 4.12 0.000 intron (NR_135305, intron 1 of 13) AluJb|SINE|Alu 23316 NR_135305 440354 Hs.552700 NR_002473 SMG1P2 - SMG1 pseudogene 2 pseudo chr7-7935 chr7 9731783 9731993 + 4.12 0.000 Intergenic Intergenic 97618 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr1-15361 chr1 147721517 147721727 + 4.12 0.000 Intergenic Intergenic 38980 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chr14-4564 chr14 46608911 46609121 + 4.12 0.000 Intergenic L1PA15|LINE|L1 42765 NM_080746 140801 Hs.308332 NM_080746 ENSG00000165496 RPL10L RPL10_5_1358 ribosomal protein L10 like protein-coding chr2-13114 chr2 113705090 113705300 + 4.12 0.000 Intergenic MER94|DNA|hAT-Blackjack 16173 NR_039943 100616208 NR_039943 ENSG00000265429 MIR4782 - microRNA 4782 ncRNA chr5-9203 chr5 180459067 180459277 + 4.12 0.000 Intergenic LTR12C|LTR|ERV1 -35207 NR_163438 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding chr1-8509 chr1 154365830 154366040 + 4.12 0.000 Intergenic AluSg7|SINE|Alu 37137 NM_001367934 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr18-1577 chr18 35581744 35581954 + 4.12 0.000 Intergenic CpG -9888 NR_039771 100616257 NR_039771 ENSG00000283514 MIR3975 - microRNA 3975 ncRNA chr18-3211 chr18 46572957 46573167 + 4.12 0.000 intron (NM_144612, intron 14 of 39) intron (NM_144612, intron 14 of 39) -13750 NM_001145472 125336 Hs.345877 NM_144612 ENSG00000167210 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding chr3-10619 chr3 146060610 146060820 + 4.12 0.000 Intergenic Intergenic 8470 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr11-5044 chr11 96986798 96987008 + 4.12 0.000 Intergenic Intergenic 478478 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr19-5962 chr19 475861 476071 + 4.12 0.000 promoter-TSS (NM_182577) promoter-TSS (NM_182577) -983 NM_182577 284451 Hs.104777 NM_182577 ENSG00000181781 ODF3L2 C19orf19 outer dense fiber of sperm tails 3 like 2 protein-coding chr3-9385 chr3 47591554 47591764 + 4.12 0.000 intron (NM_003074, intron 26 of 27) AluSx1|SINE|Alu -11419 NM_001206945 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr8-6519 chr8 66652415 66652625 + 4.12 0.000 intron (NM_025054, intron 1 of 2) AluSq2|SINE|Alu 14711 NM_025054 80124 Hs.632066 NM_025054 ENSG00000175073 VCPIP1 DUBA3|VCIP135 valosin containing protein interacting protein 1 protein-coding chr12-5611 chr12 52237632 52237842 + 4.12 0.000 intron (NM_005556, intron 3 of 8) (GT)n|Simple_repeat|Simple_repeat 4494 NM_005556 3855 Hs.411501 NM_005556 ENSG00000135480 KRT7 CK7|K2C7|K7|SCL keratin 7 protein-coding chr4-7208 chr4 41865328 41865538 + 4.12 0.000 Intergenic CpG 17178 NR_104143 101927074 Hs.611425 NR_104143 ENSG00000245870 LINC00682 - long intergenic non-protein coding RNA 682 ncRNA chr2-10965 chr2 87493678 87493888 + 4.12 0.000 intron (NR_024204, intron 3 of 3) AluY|SINE|Alu 23833 NR_146460 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr2-11151 chr2 144189056 144189266 + 4.12 0.000 intron (NM_001284238, intron 4 of 13) intron (NM_001284238, intron 4 of 13) 22418 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr8-7299 chr8 132154088 132154298 + 4.12 0.000 intron (NM_001204824, intron 9 of 14) MER61-int|LTR|ERV1 -48928 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr4-6553 chr4 181612249 181612459 + 4.12 0.000 Intergenic Intergenic 217619 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr1-15685 chr1 167546394 167546604 + 4.12 0.000 intron (NM_003851, intron 2 of 3) AluY|SINE|Alu 7263 NM_003851 8804 Hs.5710 NM_003851 ENSG00000143162 CREG1 CREG cellular repressor of E1A stimulated genes 1 protein-coding chr8-4333 chr8 99993194 99993404 + 4.12 0.000 intron (NM_015668, intron 20 of 27) L1PA6|LINE|L1 -11283 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr4-3819 chr4 118710832 118711042 + 4.12 0.000 3' UTR (NM_020961, exon 11 of 11) 3' UTR (NM_020961, exon 11 of 11) 25545 NM_020961 57721 Hs.596872 NM_020961 ENSG00000145388 METTL14 hMETTL14 methyltransferase like 14 protein-coding chr11-8618 chr11 2279316 2279526 + 4.12 0.000 Intergenic AluSp|SINE|Alu -8469 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr12-6979 chr12 29402218 29402428 + 4.12 0.000 intron (NR_073172, intron 1 of 1) intron (NR_073172, intron 1 of 1) 13029 NR_073172 101055625 Hs.569158 NR_073170 ENSG00000257599 OVCH1-AS1 - OVCH1 antisense RNA 1 ncRNA chr21-1504 chr21 42434734 42434944 + 4.12 0.000 exon (NM_001001895, exon 9 of 14) exon (NM_001001895, exon 9 of 14) 30937 NM_001001895 53347 Hs.473912 NM_018961 ENSG00000160185 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding chr11-10644 chr11 126410838 126411048 + 4.12 0.000 intron (NM_001348398, intron 9 of 10) L2c|LINE|L2 4856 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr18-2640 chr18 41770862 41771072 + 4.01 0.000 Intergenic L2a|LINE|L2 -184267 NM_001308020 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr5-6203 chr5 65646576 65646786 + 4.01 0.000 intron (NM_001093756, intron 4 of 11) L1MC4a|LINE|L1 21654 NM_001365342 80006 Hs.591760 NM_024941 ENSG00000113597 TRAPPC13 C5orf44|SHLD3 trafficking protein particle complex 13 protein-coding chr17-7986 chr17 48708060 48708270 + 4.01 0.000 Intergenic MIRb|SINE|MIR 14353 NM_032391 84366 Hs.116467 NM_032391 ENSG00000159182 PRAC1 C17orf92|PRAC PRAC1 small nuclear protein protein-coding chr1-16550 chr1 233631794 233632004 + 4.01 0.000 intron (NM_002245, intron 1 of 2) intron (NM_002245, intron 1 of 2) 7747 NR_039625 100616390 NR_039625 ENSG00000265744 MIR4427 - microRNA 4427 ncRNA chr6-3409 chr6 85768219 85768429 + 4.01 0.000 Intergenic L2|LINE|L2 -89591 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr4-6705 chr4 3596028 3596238 + 4.01 0.000 Intergenic L1MC5a|LINE|L1 19264 NR_040045 285492 Hs.145563 NM_173661 LINC00955 - long intergenic non-protein coding RNA 955 ncRNA chr8-4697 chr8 140348963 140349173 + 4.01 0.000 intron (NM_001160372, intron 9 of 22) CpG 108676 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr4-3750 chr4 82658426 82658636 + 4.01 0.000 intron (NM_001037582, intron 3 of 4) AluSc|SINE|Alu -37094 NR_024088 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr5-8401 chr5 126483294 126483504 + 4.01 0.000 intron (NR_146196, intron 8 of 14) intron (NR_146196, intron 8 of 14) 18249 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr2-3648 chr2 158325007 158325217 + 4.01 0.000 intron (NM_138803, intron 7 of 13) L2a|LINE|L2 131641 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr9-8267 chr9 112350104 112350314 + 4.01 0.000 Intergenic L1PB1|LINE|L1 -16545 NM_001163790 9991 Hs.269988 NM_005156 ENSG00000119314 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding chr8-3260 chr8 3010632 3010842 + 4.01 0.000 intron (NM_033225, intron 52 of 69) intron (NM_033225, intron 52 of 69) -282286 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr14-5355 chr14 103144081 103144291 + 4.01 0.000 Intergenic LTR3B_|LTR|ERVK 17880 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr4-8043 chr4 120521769 120521979 + 4.01 0.000 Intergenic L1MA2|LINE|L1 400992 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr13-2159 chr13 110388726 110388936 + 4.01 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 47873 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr5-7732 chr5 59413410 59413620 + 4.01 0.000 intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) -56545 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr1-14859 chr1 78818976 78819186 + 4.01 0.000 Intergenic Intergenic 169250 NM_006417 10561 Hs.82316 NM_006417 ENSG00000137965 IFI44 MTAP44|TLDC5|p44 interferon induced protein 44 protein-coding chrX-4319 chrX 45066450 45066660 + 4.01 0.000 intron (NR_111960, intron 15 of 27) intron (NR_111960, intron 15 of 27) 134321 NM_176819 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr2-11829 chr2 18791577 18791787 + 4.01 0.000 Intergenic Intergenic -202102 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr12-6012 chr12 105993057 105993267 + 4.01 0.000 Intergenic Intergenic 146871 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr20-2789 chr20 55977903 55978113 + 4.01 0.000 Intergenic Intergenic 27511 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr1-15166 chr1 107530571 107530781 + 4.01 0.000 Intergenic Intergenic 157823 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr13-4181 chr13 89355456 89355666 + 4.01 0.000 Intergenic Intergenic -118671 NR_131229 105616982 Hs.564527 NR_131229 ENSG00000232225 LINC01047 - long intergenic non-protein coding RNA 1047 ncRNA chr17-7672 chr17 30503014 30503224 + 4.01 0.000 intron (NM_004871, intron 6 of 8) (ATTT)n|Simple_repeat|Simple_repeat 25711 NM_001007024 9527 Hs.462680 NM_004871 ENSG00000108587 GOSR1 GOLIM2|GOS-28|GOS28|GOS28/P28|GS28|P28 golgi SNAP receptor complex member 1 protein-coding chr14-1889 chr14 95426866 95427076 + 4.01 0.000 intron (NM_001363692, intron 16 of 16) LTR13|LTR|ERVK 48864 NM_152592 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|KASH3|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chr4-6394 chr4 116782274 116782484 + 4.01 0.000 Intergenic Intergenic 303197 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr8-7332 chr8 134088234 134088444 + 4.01 0.000 Intergenic Intergenic 201843 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr5-6400 chr5 146175442 146175652 + 4.01 0.000 intron (NM_001317965, intron 1 of 30) AluSz|SINE|Alu 7103 NM_020117 51520 Hs.432674 NM_016460 ENSG00000133706 LARS HSPC192|ILFS1|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl leucyl-tRNA synthetase protein-coding chr14-4124 chr14 71891138 71891348 + 4.01 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -40928 NM_001204423 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr6-5900 chr6 44728586 44728796 + 4.01 0.000 Intergenic MIR|SINE|MIR -176810 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chrX-4816 chrX 101723571 101723781 + 4.01 0.000 Intergenic MER21B|LTR|ERVL -63826 NM_177949 9823 Hs.48924 NM_014782 ENSG00000184867 ARMCX2 ALEX2|GASP9 armadillo repeat containing X-linked 2 protein-coding chrX-4080 chrX 22234600 22234810 + 4.01 0.000 intron (NR_073010, intron 8 of 11) L1PA7|LINE|L1 -38208 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr3-9838 chr3 78119491 78119701 + 4.01 0.000 Intergenic Intergenic -70633 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr3-10295 chr3 125573741 125573951 + 4.01 0.000 intron (NM_022776, intron 5 of 12) AluSp|SINE|Alu 21651 NM_022776 114885 Hs.477440 NM_022776 ENSG00000144909 OSBPL11 ORP-11|ORP11|OSBP12|TCCCIA00292 oxysterol binding protein like 11 protein-coding chr9-6125 chr9 22238984 22239194 + 4.01 0.000 Intergenic Intergenic -207735 NM_022160 63951 Hs.371976 NM_022160 ENSG00000176399 DMRTA1 DMO|DMRT4 DMRT like family A1 protein-coding chr6-6973 chr6 18343402 18343612 + 4.01 0.000 Intergenic Intergenic -43843 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr7-7656 chr7 148583736 148583946 + 4.01 0.000 Intergenic AluJo|SINE|Alu -6925 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr5-6446 chr5 165095463 165095673 + 4.01 0.000 Intergenic AluSx1|SINE|Alu 625289 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr11-7943 chr11 3514429 3514639 + 4.01 0.000 intron (NR_126335, intron 2 of 2) HERVS71-int|LTR|ERV1 57453 NR_126335 101927708 Hs.577316 NR_126335 ENSG00000255367 LOC101927708 - uncharacterized LOC101927708 ncRNA chrX-5169 chrX 132678353 132678563 + 4.01 0.000 intron (NM_001077188, intron 4 of 5) intron (NM_001077188, intron 4 of 5) 10816 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chr12-6456 chr12 93241582 93241792 + 4.01 0.000 intron (NR_040096, intron 2 of 4) intron (NR_040096, intron 2 of 4) 67321 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr19-6101 chr19 3598340 3598550 + 4.01 0.000 intron (NM_001060, intron 2 of 2) AluSx3|SINE|Alu 8388 NM_001060 6915 Hs.442530 NM_001060 ENSG00000006638 TBXA2R BDPLT13|TXA2-R thromboxane A2 receptor protein-coding chrX-1939 chrX 3039139 3039349 + 4.01 0.000 promoter-TSS (NM_001201538) promoter-TSS (NM_001201538) -990 NM_001201538 416 Hs.101674 NM_004042 ENSG00000062096 ARSF ASF arylsulfatase F protein-coding chrX-3573 chrX 72366216 72366426 + 4.01 0.000 intron (NR_051952, intron 8 of 9) L2c|LINE|L2 -59164 NM_001144886 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr10-8111 chr10 69461583 69461793 + 4.01 0.000 intron (NM_001351263, intron 1 of 5) intron (NM_001351263, intron 1 of 5) 10221 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr3-10722 chr3 154326670 154326880 + 4.01 0.000 Intergenic L2|LINE|L2 -2278 NM_001114397 170506 Hs.446270 NM_020865 ENSG00000174953 DHX36 DDX36|G4R1|MLEL1|RHAU DEAH-box helicase 36 protein-coding chr8-3984 chr8 52881010 52881220 + 4.01 0.000 Intergenic MER41-int|LTR|ERV1 -58793 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr7-9712 chr7 155813943 155814153 + 4.01 0.000 Intergenic Intergenic -1585 NM_000193 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr6-5800 chr6 11745039 11745249 + 4.01 0.000 intron (NM_032744, intron 3 of 5) intron (NM_032744, intron 3 of 5) 33903 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr7-8709 chr7 74525351 74525561 + 4.01 0.000 intron (NM_016328, intron 8 of 26) intron (NM_016328, intron 8 of 26) -70512 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr4-7715 chr4 89574430 89574640 + 4.01 0.000 Intergenic Intergenic -261866 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA chr9-6187 chr9 89673862 89674072 + 4.01 0.000 intron (NR_024280, intron 3 of 5) intron (NR_024280, intron 3 of 5) 34184 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr13-4386 chr13 108983615 108983825 + 4.01 0.000 intron (NM_015011, intron 20 of 34) intron (NM_015011, intron 20 of 34) 183583 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr7-8539 chr7 55593838 55594048 + 4.01 0.000 Intergenic Intergenic -21441 NM_001321243 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr20-4392 chr20 58140059 58140269 + 4.01 0.000 Intergenic MIR|SINE|MIR -10738 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr9-8925 chr9 137147502 137147712 + 4.01 0.000 intron (NM_021569, intron 3 of 18) intron (NM_021569, intron 3 of 18) 8453 NM_000832 2902 Hs.558334 NM_000832 ENSG00000176884 GRIN1 GluN1|MRD8|NDHMSD|NDHMSR|NMD-R1|NMDA1|NMDAR1|NR1 glutamate ionotropic receptor NMDA type subunit 1 protein-coding chr7-4418 chr7 102654215 102654425 + 4.01 0.000 intron (NM_001031618, intron 3 of 8).2 AluSz|SINE|Alu 3995 NM_001166339 100310812 Hs.433879 NM_001166339 ENSG00000173678 SPDYE2B SPDYE2L speedy/RINGO cell cycle regulator family member E2B protein-coding chr4-7818 chr4 99389807 99390017 + 4.01 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -37166 NM_000669 126 Hs.654537 NM_000669 ENSG00000248144 ADH1C ADH3 alcohol dehydrogenase 1C (class I), gamma polypeptide protein-coding chr2-10524 chr2 231735212 231735422 + 4.01 0.000 intron (NM_001291018, intron 3 of 3) AluSc8|SINE|Alu 22003 NR_036052 100302285 NR_036052 ENSG00000284378 MIR1244-1 MIR1244|MIRN1244|hsa-mir-1244|hsa-mir-1244-1 microRNA 1244-1 ncRNA chr2-14259 chr2 213917312 213917522 + 4.01 0.000 intron (NR_047660, intron 10 of 14) L1PA13|LINE|L1 159350 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr5-9093 chr5 172497607 172497817 + 4.01 0.000 Intergenic Intergenic -43187 NM_001017995 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chrX-4721 chrX 89164049 89164259 + 4.01 0.000 Intergenic L1PA10|LINE|L1 416929 NM_001184771 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding chr9-6495 chr9 97743399 97743609 + 4.01 0.000 intron (NR_147055, intron 5 of 10) MIR|SINE|MIR -46095 NM_000380 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr7-9754 chr7 159126896 159127106 + 4.01 0.000 intron (NR_130758, intron 2 of 12) intron (NR_130758, intron 2 of 12) 17866 NM_003382 7434 Hs.585052 NM_003382 ENSG00000106018 VIPR2 C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R vasoactive intestinal peptide receptor 2 protein-coding chr10-5682 chr10 99535271 99535481 + 4.01 0.000 exon (NM_145285, exon 2 of 2) exon (NM_145285, exon 2 of 2) 2434 NM_145285 159296 Hs.243272 NM_145285 ENSG00000119919 NKX2-3 CSX3|NK2.3|NKX2.3|NKX2C|NKX4-3 NK2 homeobox 3 protein-coding chr14-4795 chr14 65762094 65762304 + 4.01 0.000 Intergenic Intergenic 291097 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr8-5623 chr8 100426639 100426849 + 4.01 0.000 Intergenic (CAC)n|Simple_repeat|Simple_repeat 43981 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr13-4388 chr13 109064802 109065012 + 4.01 0.000 intron (NM_015011, intron 27 of 34) MLT1H|LTR|ERVL-MaLR 102396 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr1-12795 chr1 82602915 82603125 + 4.01 0.000 Intergenic Intergenic -300163 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr8-6523 chr8 67167399 67167609 + 4.01 0.000 intron (NM_001363133, intron 21 of 27) SVA_C|Retroposon|SVA 83656 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr4-7287 chr4 52511769 52511979 + 4.01 0.000 Intergenic AluJb|SINE|Alu 144665 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding chr6-7399 chr6 51173265 51173475 + 4.01 0.000 Intergenic Intergenic 354499 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr7-7385 chr7 68047095 68047305 + 4.01 0.000 Intergenic MIR|SINE|MIR 26947 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr14-3761 chr14 50491551 50491761 + 4.01 0.000 intron (NM_198794, intron 3 of 31) intron (NM_198794, intron 3 of 31) 40913 NM_198794 11183 Hs.130491 NM_006575 ENSG00000012983 MAP4K5 GCKR|KHS|KHS1|MAPKKKK5 mitogen-activated protein kinase kinase kinase kinase 5 protein-coding chr4-6181 chr4 42170489 42170699 + 4.01 0.000 Intergenic Intergenic -17939 NM_207406 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding chr3-3666 chr3 138711481 138711691 + 4.01 0.000 intron (NM_006219, intron 10 of 23) AluSp|SINE|Alu -3965 NM_001256045 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr18-3093 chr18 34823747 34823957 + 4.01 0.000 intron (NM_032980, intron 2 of 13) intron (NM_032980, intron 2 of 13) 5471 NM_032980 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr13-3319 chr13 55185181 55185391 + 4.01 0.000 Intergenic Intergenic 10832 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr8-6655 chr8 79569295 79569505 + 4.01 0.000 Intergenic Intergenic -41717 NM_007029 11075 Hs.521651 NM_007029 ENSG00000104435 STMN2 SCG10|SCGN10 stathmin 2 protein-coding chr12-5773 chr12 5013205 5013415 + 4.01 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -30569 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr3-9319 chr3 44250144 44250354 + 4.01 0.000 intron (NM_001145030, intron 2 of 19) (A)n|Simple_repeat|Simple_repeat 8363 NM_001145030 375337 Hs.132125 NM_001145030 ENSG00000173769 TOPAZ1 C3orf77 testis and ovary specific PAZ domain containing 1 protein-coding chr11-10301 chr11 107204095 107204305 + 4.01 0.000 Intergenic MIRb|SINE|MIR -185724 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr7-5202 chr7 11855469 11855679 + 4.01 0.000 Intergenic Intergenic -23376 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr2-9669 chr2 29639120 29639330 + 4.01 0.000 intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -163848 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr7-3326 chr7 72898900 72899110 + 4.01 0.000 intron (NM_001367610, intron 5 of 15) AluSx1|SINE|Alu 8378 NM_172020 9883 Hs.655217 NM_172020 ENSG00000196313 POM121 P145|POM121A POM121 transmembrane nucleoporin protein-coding chr22-3291 chr22 49636114 49636324 + 4.01 0.000 intron (NM_001289922, intron 1 of 5) intron (NM_001289922, intron 1 of 5) 21300 NR_110522 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr20-4319 chr20 52318745 52318955 + 4.01 0.000 Intergenic Intergenic -126865 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr11-10079 chr11 85235878 85236088 + 4.01 0.000 intron (NM_001142699, intron 4 of 27) intron (NM_001142699, intron 4 of 27) -312562 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr4-8545 chr4 164982226 164982436 + 4.01 0.000 Intergenic MIR|SINE|MIR -4674 NM_001012414 391712 Hs.654633 NM_001012414 ENSG00000183439 TRIM61 RNF35 tripartite motif containing 61 protein-coding chr16-5281 chr16 60400367 60400577 + 4.01 0.000 Intergenic AluSx|SINE|Alu -40679 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr16-6301 chr16 47054995 47055205 + 4.01 0.000 Intergenic MER52C|LTR|ERV1 -81426 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chrX-4046 chrX 18193111 18193321 + 4.01 0.000 intron (NM_001184767, intron 5 of 10) AluSz6|SINE|Alu 27670 NM_153346 139105 Hs.403802 NM_153346 ENSG00000177324 BEND2 CXorf20 BEN domain containing 2 protein-coding chr10-7261 chr10 126581850 126582060 + 4.01 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) -60462 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr4-4261 chr4 20771532 20771742 + 4.01 0.000 intron (NM_025221, intron 2 of 7) intron (NM_025221, intron 2 of 7) 71179 NM_001330747 133015 Hs.479298 NM_145048 ENSG00000163138 PACRGL C4orf28 parkin coregulated like protein-coding chr2-11014 chr2 104880257 104880467 + 4.01 0.000 Intergenic Intergenic -7767 NR_110373 102682016 Hs.638438 NR_110373 ENSG00000229743 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA chr13-4309 chr13 100056608 100056818 + 4.01 0.000 Intergenic AluSp|SINE|Alu 32230 NR_132422 105370333 Hs.186291 NR_132422 ENSG00000274605 LOC105370333 - uncharacterized LOC105370333 ncRNA chrX-1597 chrX 94279654 94279864 + 4.01 0.000 Intergenic L1PB1|LINE|L1 605553 NM_001171110 286499 Hs.110069 NM_173698 ENSG00000179083 FAM133A CT115 family with sequence similarity 133 member A protein-coding chr3-9125 chr3 30915931 30916141 + 4.01 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -21375 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr6-7034 chr6 24747857 24748067 + 4.01 0.000 Intergenic AluSx|SINE|Alu -26975 NM_001251989 51053 Hs.234896 NM_015895 ENSG00000112312 GMNN Gem|MGORS6 geminin DNA replication inhibitor protein-coding chr10-8029 chr10 63247718 63247928 + 4.01 0.000 intron (NM_001322252, intron 2 of 24) L1MA4|LINE|L1 21400 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr17-8004 chr17 49581897 49582107 + 4.01 0.000 3' UTR (NM_007225, exon 2 of 2) 3' UTR (NM_007225, exon 2 of 2) 6131 NM_007225 11248 Hs.55069 NM_007225 ENSG00000182575 NXPH3 NPH3 neurexophilin 3 protein-coding chr2-12643 chr2 73693818 73694028 + 4.01 0.000 Intergenic AluSc8|SINE|Alu 7417 NM_016347 51471 Hs.278983 NM_016347 ENSG00000204872 NAT8B CML2|Hcml2|NAT8BP N-acetyltransferase 8B (putative, gene/pseudogene) protein-coding chr7-7068 chr7 150178087 150178297 + 4.01 0.000 intron (NM_001351028, intron 6 of 9) Kanga1|DNA|TcMar-Tc2 42908 NR_147017 653857 Hs.664579 NM_001164458 ENSG00000106526 ACTR3C ARP11 actin related protein 3C protein-coding chr1-14933 chr1 85792396 85792606 + 4.01 0.000 intron (NM_152890, intron 47 of 59) AluJo|SINE|Alu -84068 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr8-6580 chr8 70418997 70419207 + 4.01 0.000 Intergenic Intergenic -14885 NM_001321703 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr2-8431 chr2 119541751 119541961 + 4.01 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -2576 NR_073133 200373 Hs.496753 NM_001029996 ENSG00000163075 CFAP221 FAP221|PCDP1 cilia and flagella associated protein 221 protein-coding chr9-7943 chr9 90843790 90844000 + 4.01 0.000 5' UTR (NM_003177, exon 2 of 14) 5' UTR (NM_003177, exon 2 of 14) 16475 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr20-3378 chr20 34844065 34844275 + 4.01 0.000 TTS (NM_001351702) TTS (NM_001351702) -9708 NR_002165 128872 Hs.558624 NR_002165 HMGB3P1 HMG4L|HMGB3L1|dJ18C9.3 high mobility group box 3 pseudogene 1 pseudo chr7-8650 chr7 70897928 70898138 + 4.01 0.000 Intergenic L1MD1|LINE|L1 -234111 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr1-14353 chr1 41467284 41467494 + 4.01 0.000 Intergenic Intergenic 17294 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr15-4263 chr15 34774992 34775202 + 4.01 0.000 intron (NR_120329, intron 1 of 2) intron (NR_120329, intron 1 of 2) 20013 NR_120329 101928174 Hs.680670 NR_120329 ENSG00000250007 LOC101928174 - uncharacterized LOC101928174 ncRNA chr12-7603 chr12 78782853 78783063 + 4.01 0.000 Intergenic L1MC5a|LINE|L1 -81024 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr14-4855 chr14 69863560 69863770 + 4.01 0.000 Intergenic Intergenic -15751 NM_022137 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding chr17-7690 chr17 31431933 31432143 + 4.01 0.000 intron (NM_032932, intron 2 of 14) intron (NM_032932, intron 2 of 14) 40363 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr17-7580 chr17 20781736 20781946 + 4.01 0.000 Intergenic AluJo|SINE|Alu 69395 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr5-7157 chr5 3222917 3223127 + 4.01 0.000 Intergenic Intergenic 45187 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr8-6699 chr8 84020414 84020624 + 4.01 0.000 Intergenic L1PA3|LINE|L1 -162268 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr7-9060 chr7 103857260 103857470 + 4.01 0.000 intron (NM_005045, intron 2 of 64) intron (NM_005045, intron 2 of 64) 132151 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chrX-4357 chrX 48866590 48866800 + 4.01 0.000 Intergenic AluSc|SINE|Alu -31085 NM_013271 27344 Hs.522640 NM_013271 ENSG00000102109 PCSK1N BigLEN|PEN|PROSAAS|SAAS|SCG8|SgVIII proprotein convertase subtilisin/kexin type 1 inhibitor protein-coding chr11-6984 chr11 116368479 116368689 + 4.01 0.000 Intergenic Intergenic -270838 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr10-8381 chr10 81267105 81267315 + 4.01 0.000 Intergenic L1MA9|LINE|L1 -607984 NM_001370083 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr1-14425 chr1 45094764 45094974 + 4.01 0.000 intron (NM_020883, intron 1 of 13) AluJb|SINE|Alu 82615 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr2-10672 chr2 22826710 22826920 + 4.01 0.000 Intergenic Intergenic 290336 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr10-8920 chr10 115597727 115597937 + 4.01 0.000 intron (NM_207303, intron 26 of 28) AluSq2|SINE|Alu 504467 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr4-6003 chr4 189268175 189268385 + 4.01 0.000 Intergenic Intergenic -391326 NR_121679 101928971 Hs.519164 NR_121679 ENSG00000250739 LINC01262 TCONS_l2_00021807 long intergenic non-protein coding RNA 1262 ncRNA chr9-4967 chr9 18031879 18032089 + 4.01 0.000 Intergenic L1PA16|LINE|L1 -442169 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chrX-4511 chrX 66010332 66010542 + 4.01 0.000 Intergenic MIR|SINE|MIR -8433 NR_029637 407008 NR_029637 ENSG00000284567 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA chr19-4666 chr19 16887591 16887801 + 4.01 0.000 Intergenic Intergenic -1303 NM_003950 9002 Hs.137574 NM_003950 ENSG00000127533 F2RL3 PAR4 F2R like thrombin or trypsin receptor 3 protein-coding chr20-3628 chr20 8145303 8145513 + 4.01 0.000 intron (NM_182734, intron 1 of 32) MLT1B|LTR|ERVL-MaLR 13142 NM_182734 23236 Hs.431173 NM_015192 ENSG00000182621 PLCB1 EIEE12|PI-PLC|PLC-154|PLC-I|PLC-beta-1|PLC154|PLCB1A|PLCB1B phospholipase C beta 1 protein-coding chr12-7842 chr12 102787536 102787746 + 4.01 0.000 Intergenic L2a|LINE|L2 36758 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr15-3363 chr15 84777572 84777782 + 4.01 0.000 intron (NM_014630, intron 2 of 10) intron (NM_014630, intron 2 of 10) 29085 NM_014630 9640 Hs.79347 NM_014630 ENSG00000166716 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding chr1-15328 chr1 119553905 119554115 + 4.01 0.000 Intergenic Intergenic -9870 NR_033781 128102 Hs.681806 NR_033781 HSD3BP4 - hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 4 pseudo chr15-4784 chr15 71199737 71199947 + 4.01 0.000 intron (NM_024817, intron 2 of 16) (TG)n|Simple_repeat|Simple_repeat -10783 NR_120348 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr7-6676 chr7 149559897 149560107 + 4.01 0.000 intron (NR_027788, intron 3 of 7) intron (NR_027788, intron 3 of 7) -62193 NM_152557 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr9-6470 chr9 90174022 90174232 + 4.01 0.000 Intergenic Intergenic -132628 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chrX-1595 chrX 87947152 87947362 + 4.01 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR 429455 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr1-14208 chr1 34788981 34789191 + 4.01 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -3913 NM_002060 2701 Hs.296310 NM_002060 ENSG00000187513 GJA4 CX37 gap junction protein alpha 4 protein-coding chr2-11512 chr2 237863881 237864091 + 4.01 0.000 intron (NM_005855, intron 1 of 2) intron (NM_005855, intron 1 of 2) 4363 NM_001308353 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding KI270753.1-1 KI270753.1 21055 21265 + 4.01 0.000 NA NA NA NA chr1-14993 chr1 90889499 90889709 + 4.01 0.000 Intergenic AluSz6|SINE|Alu 37845 NR_146610 105378854 Hs.606283 NR_146610 LINC01763 - long intergenic non-protein coding RNA 1763 ncRNA chr4-6740 chr4 4931551 4931761 + 4.01 0.000 intron (NR_125893, intron 1 of 2) MER81|DNA|hAT-Blackjack 10848 NR_125893 101928306 Hs.543743 NR_125893 LOC101928306 - uncharacterized LOC101928306 ncRNA chr2-10802 chr2 46405478 46405688 + 4.01 0.000 Intergenic Intergenic -11416 NR_146999 105374582 Hs.570163 NR_146999 ENSG00000228100 LINC01820 - long intergenic non-protein coding RNA 1820 ncRNA chr14-4848 chr14 69684703 69684913 + 4.01 0.000 intron (NM_014734, intron 2 of 5) intron (NM_014734, intron 2 of 5) 73212 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr10-8705 chr10 101847520 101847730 + 4.01 0.000 intron (NM_024541, intron 25 of 25) intron (NM_024541, intron 25 of 25) -3705 NM_173192 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr17-8182 chr17 62031381 62031591 + 4.01 0.000 exon (NM_005121, exon 6 of 30) exon (NM_005121, exon 6 of 30) 33792 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr12-5670 chr12 92880321 92880531 + 4.01 0.000 intron (NM_003566, intron 2 of 28) AluSg4|SINE|Alu 48869 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr1-12833 chr1 91229159 91229369 + 4.01 0.000 Intergenic AluSp|SINE|Alu 175573 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr15-3505 chr15 98947126 98947336 + 4.01 0.000 intron (NM_000875, intron 19 of 20) intron (NM_000875, intron 19 of 20) 58425 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr14-1843 chr14 64879592 64879802 + 4.01 0.000 intron (NM_001355436, intron 1 of 35) CpG 210 NM_001355437 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr17-7725 chr17 33259549 33259759 + 4.01 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 33334 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr7-9302 chr7 127609014 127609224 + 4.01 0.000 Intergenic MER52A|LTR|ERV1 6908 NM_001366111 5078 Hs.129706 NM_006193 ENSG00000106331 PAX4 KPD|MODY9 paired box 4 protein-coding chr7-8465 chr7 48321562 48321772 + 4.01 0.000 intron (NM_152701, intron 27 of 61) intron (NM_152701, intron 27 of 61) 150209 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr2-8681 chr2 150542648 150542858 + 4.01 0.000 Intergenic LTR12C|LTR|ERV1 29468 NR_110241 101929260 Hs.732324 NR_110241 ENSG00000236049 LINC01920 - long intergenic non-protein coding RNA 1920 ncRNA chr6-7063 chr6 27999205 27999415 + 4.01 0.000 Intergenic Intergenic 42069 NM_012367 26212 Hs.532145 NM_012367 ENSG00000124657 OR2B6 OR2B1|OR2B1P|OR2B5|OR2B6P|OR5-40|OR5-41|OR6-31|dJ408B20.2 olfactory receptor family 2 subfamily B member 6 protein-coding chr20-3445 chr20 49972016 49972226 + 4.01 0.000 Intergenic U6|snRNA|snRNA -10859 NM_005985 6615 Hs.48029 NM_005985 ENSG00000124216 SNAI1 SLUGH2|SNA|SNAH|SNAIL|SNAIL1|dJ710H13.1 snail family transcriptional repressor 1 protein-coding chr14-4094 chr14 66709372 66709582 + 4.01 0.000 intron (NM_001024218, intron 2 of 21) MER44C|DNA|TcMar-Tigger 202070 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr11-5602 chr11 113406569 113406779 + 4.01 0.000 Intergenic Intergenic 18895 NM_178510 255239 Hs.448473 NM_178510 ENSG00000170209 ANKK1 PKK2|sgK288 ankyrin repeat and kinase domain containing 1 protein-coding chr3-7637 chr3 27869919 27870129 + 4.01 0.000 Intergenic L1MA8|LINE|L1 -35888 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr3-7631 chr3 25430825 25431035 + 4.01 0.000 intron (NR_110892, intron 1 of 6) intron (NR_110892, intron 1 of 6) 2667 NM_001290277 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr2-13228 chr2 124304813 124305023 + 4.01 0.000 intron (NM_130773, intron 3 of 23) L2c|LINE|L2 279631 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr14-4470 chr14 34934443 34934653 + 4.01 0.000 intron (NR_151701, intron 2 of 4) AluY|SINE|Alu -5374 NR_002937 280655 Hs.639271 NR_002937 IGBP1P1 C14orf19 immunoglobulin (CD79A) binding protein 1 pseudogene 1 pseudo chr13-3259 chr13 36802716 36802926 + 4.01 0.000 Intergenic AluSq|SINE|Alu -16381 NM_000538 5994 Hs.24422 NM_000538 ENSG00000133111 RFXAP - regulatory factor X associated protein protein-coding chr8-7342 chr8 134590246 134590456 + 4.01 0.000 exon (NM_001289394, exon 9 of 17) exon (NM_001289394, exon 9 of 17) -7720 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr11-6169 chr11 44622787 44622997 + 4.01 0.000 Intergenic Intergenic 57229 NM_002231 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr10-6431 chr10 21495639 21495849 + 4.01 0.000 TTS (NR_031736) TTS (NR_031736) 897 NR_031736 100302129 NR_031736 ENSG00000222071 MIR1915 MIRN1915|hsa-mir-1915 microRNA 1915 ncRNA chr2-14301 chr2 216722622 216722832 + 4.01 0.000 Intergenic L3b|LINE|CR1 -27178 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr15-3723 chr15 52104904 52105114 + 4.01 0.000 Intergenic Intergenic 7766 NM_001306168 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr11-10053 chr11 84078122 84078332 + 4.01 0.000 intron (NM_001142699, intron 10 of 27) Charlie2b|DNA|hAT-Charlie 195053 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr6-8577 chr6 164641493 164641703 + 4.01 0.000 Intergenic AluSp|SINE|Alu 180465 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr8-6298 chr8 42967776 42967986 + 4.01 0.000 intron (NM_032410, intron 10 of 21) intron (NM_032410, intron 10 of 21) 70903 NM_032410 84376 Hs.162852 NM_032410 ENSG00000168172 HOOK3 HK3 hook microtubule tethering protein 3 protein-coding chr2-11059 chr2 114248681 114248891 + 4.01 0.000 Intergenic Intergenic -193855 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr1-12718 chr1 55082519 55082729 + 4.01 0.000 intron (NM_015306, intron 58 of 67) AluJb|SINE|Alu 42402 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr3-8611 chr3 167577606 167577816 + 4.01 0.000 intron (NM_001348951, intron 7 of 18) intron (NM_001348951, intron 7 of 18) 76231 NM_001366157 151790 Hs.213762 NM_178824 ENSG00000174776 WDR49 - WD repeat domain 49 protein-coding chr19-5858 chr19 44780958 44781168 + 4.01 0.000 intron (NM_012116, intron 2 of 10) intron (NM_012116, intron 2 of 10) 3173 NM_012116 23624 Hs.466907 NM_012116 ENSG00000142273 CBLC CBL-3|CBL-SL|RNF57 Cbl proto-oncogene C protein-coding chrX-4243 chrX 39060096 39060306 + 4.01 0.000 Intergenic LTR27E|LTR|ERV1 -256318 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr1-16623 chr1 239181164 239181374 + 4.01 0.000 Intergenic ERV24B_Prim-int|LTR|ERV1 -205299 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr1-14232 chr1 36281095 36281305 + 4.01 0.000 intron (NM_001321471, intron 3 of 12) AluSq2|SINE|Alu -25168 NM_001162530 79729 Hs.524496 NM_024676 ENSG00000214193 SH3D21 C1orf113 SH3 domain containing 21 protein-coding chr1-14673 chr1 60748606 60748816 + 4.01 0.000 intron (NR_110628, intron 1 of 5) L2c|LINE|L2 76873 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chrX-2749 chrX 129095981 129096191 + 4.01 0.000 Intergenic L1ME2z|LINE|L1 427404 NM_003069 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr4-6272 chr4 77986640 77986850 + 4.01 0.000 Intergenic Intergenic -70578 NM_025074 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr16-6773 chr16 77160609 77160819 + 4.01 0.000 Intergenic Intergenic -30476 NM_014940 22879 Hs.513743 NM_014940 ENSG00000103111 MON1B HSRG1|SAND2|SRG1 MON1 homolog B, secretory trafficking associated protein-coding chr3-9824 chr3 75152656 75152866 + 4.01 0.000 Intergenic L1PA17|LINE|L1 -61715 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chrX-4542 chrX 68869104 68869314 + 4.01 0.000 Intergenic L2a|LINE|L2 40212 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr4-6038 chr4 2569012 2569222 + 4.01 0.000 intron (NM_001366318, intron 1 of 20) AluSx|SINE|Alu 32470 NM_001366318 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr4-8720 chr4 183360338 183360548 + 4.01 0.000 Intergenic Intergenic -38017 NM_001185149 100132463 Hs.727475 NM_001185149 ENSG00000185758 CLDN24 CLDN21 claudin 24 protein-coding chr11-9201 chr11 37321352 37321562 + 4.01 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -617144 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr3-7542 chr3 185120009 185120219 + 4.01 0.000 intron (NM_001025266, intron 1 of 1) intron (NM_001025266, intron 1 of 1) 32946 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr7-9604 chr7 149022427 149022637 + 4.01 0.000 intron (NR_163905, intron 1 of 9) intron (NR_163905, intron 1 of 9) 2777 NR_163909 chr15-3935 chr15 39102140 39102350 + 4.01 0.000 Intergenic L1MC5|LINE|L1 -148424 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr13-4336 chr13 102223456 102223666 + 4.01 0.000 intron (NM_001321940, intron 1 of 5) intron (NM_001321940, intron 1 of 5) 87125 NM_001321934 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr4-7086 chr4 32191469 32191679 + 4.01 0.000 Intergenic Intergenic -159464 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr15-4770 chr15 70259960 70260170 + 4.01 0.000 Intergenic Intergenic -162148 NM_001282980 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr2-8544 chr2 132895155 132895365 + 4.01 0.000 intron (NM_207481, intron 8 of 17) AluY|SINE|Alu -20297 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr21-1600 chr21 16563823 16564033 + 4.01 0.000 intron (NR_136547, intron 2 of 2) intron (NR_136547, intron 2 of 2) 24100 NR_029480 406885 NR_029480 ENSG00000199030 MIRLET7C LET7C|MIRNLET7C|hsa-let-7c|let-7c microRNA let-7c ncRNA chr6-6297 chr6 41480394 41480604 + 4.01 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -21945 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr6-8047 chr6 120864752 120864962 + 4.01 0.000 Intergenic L1MA2|LINE|L1 469623 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr1-14563 chr1 53032918 53033128 + 4.01 0.000 intron (NM_001007250, intron 2 of 3) intron (NM_001007250, intron 2 of 3) 18085 NM_001007250 6342 Hs.476365 NM_002979 ENSG00000116171 SCP2 NLTP|NSL-TP|SCP-2|SCP-CHI|SCP-X|SCPX sterol carrier protein 2 protein-coding chr7-7915 chr7 7338868 7339078 + 4.01 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 83819 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA chr4-4410 chr4 44742808 44743018 + 4.01 0.000 Intergenic L2a|LINE|L2 -16279 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding chr9-7436 chr9 24724066 24724276 + 4.01 0.000 Intergenic Charlie2b|DNA|hAT-Charlie -178274 NM_001365008 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr11-9148 chr11 34213986 34214196 + 4.01 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 108462 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr8-2260 chr8 73258519 73258729 + 4.01 0.000 intron (NM_001243237, intron 1 of 3) intron (NM_001243237, intron 1 of 3) 878 NM_001243237 100130301 Hs.202296 NM_001243237 ENSG00000274443 C8orf89 - chromosome 8 open reading frame 89 protein-coding chr1-13886 chr1 21697089 21697299 + 4.01 0.000 intron (NM_001350167, intron 22 of 26) intron (NM_001350167, intron 22 of 26) -27837 NM_001145657 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr12-5268 chr12 109829548 109829758 + 4.01 0.000 intron (NM_021625, intron 1 of 15) intron (NM_021625, intron 1 of 15) -3695 NR_039718 100616454 NR_039718 ENSG00000263510 MIR4497 mir-4497 microRNA 4497 ncRNA chr12-3967 chr12 12696382 12696592 + 4.01 0.000 promoter-TSS (NM_006143) promoter-TSS (NM_006143) -304 NM_006143 2842 Hs.657862 NM_006143 ENSG00000183150 GPR19 - G protein-coupled receptor 19 protein-coding chr8-6036 chr8 23726963 23727173 + 4.01 0.000 Intergenic CpG -20470 NM_001136271 137814 Hs.532654 NM_001136271 ENSG00000180053 NKX2-6 CSX2|CTHM|NKX2F|NKX4-2 NK2 homeobox 6 protein-coding chr18-2641 chr18 42948879 42949089 + 4.01 0.000 intron (NM_001272077, intron 3 of 5) intron (NM_001272077, intron 3 of 5) 166701 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr1-6079 chr1 100539830 100540040 + 4.01 0.000 exon (NM_022049, exon 2 of 2) exon (NM_022049, exon 2 of 2) 1796 NM_022049 54112 Hs.170053 NM_022049 ENSG00000181656 GPR88 COCPMR|STRG G protein-coupled receptor 88 protein-coding chr2-14521 chr2 228866403 228866613 + 4.01 0.000 Intergenic MER52D|LTR|ERV1 -255113 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr12-4217 chr12 104415978 104416188 + 4.01 0.000 Intergenic AluSz|SINE|Alu -40865 NM_018413 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr2-7775 chr2 40999634 40999844 + 4.01 0.000 Intergenic MIRc|SINE|MIR -487304 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr12-6875 chr12 20194407 20194617 + 4.01 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -66611 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr2-13595 chr2 157976644 157976854 + 4.01 0.000 Intergenic AluSx|SINE|Alu -18430 NM_001135098 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr8-5129 chr8 69891026 69891236 + 4.01 0.000 Intergenic Intergenic -56153 NM_030958 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr6-7648 chr6 81937368 81937578 + 4.01 0.000 intron (NR_149134, intron 1 of 2) intron (NR_149134, intron 1 of 2) 948 NR_149134 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr6-8019 chr6 117863080 117863290 + 4.01 0.000 Intergenic THE1B|LTR|ERVL-MaLR -44079 NM_001029858 222553 Hs.654841 NM_001029858 ENSG00000196376 SLC35F1 C6orf169|dJ230I3.1 solute carrier family 35 member F1 protein-coding chr3-10511 chr3 137065479 137065689 + 4.01 0.000 Intergenic Intergenic 107601 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr4-7299 chr4 53814660 53814870 + 4.01 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 118864 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr8-5682 chr8 121641334 121641544 + 4.01 0.000 promoter-TSS (NM_005328) promoter-TSS (NM_005328) 1 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr3-8768 chr3 3270986 3271196 + 4.01 0.000 Intergenic Intergenic -91374 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr2-11783 chr2 14610557 14610767 + 4.01 0.000 Intergenic AluY|SINE|Alu -22055 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr5-8928 chr5 157891791 157892001 + 4.01 0.000 Intergenic MamRep4096|DNA|hAT-Tip100 -32751 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr1-11473 chr1 104608568 104608778 + 4.01 0.000 Intergenic L1PA7|LINE|L1 535650 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo chr10-6446 chr10 28209373 28209583 + 4.01 0.000 intron (NR_134517, intron 2 of 16) AluJr|SINE|Alu 72645 NM_173496 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr7-7251 chr7 28258162 28258372 + 4.01 0.000 Intergenic MamRTE1|LINE|RTE-BovB -41054 NM_182899 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr13-1102 chr13 107288119 107288329 + 4.01 0.000 intron (NM_001080396, intron 1 of 2) AluSx1|SINE|Alu 32739 NR_145739 109616978 NR_145739 ENSG00000201847 SNORD31B - small nucleolar RNA, C/D box 31B snoRNA chr4-3789 chr4 101915066 101915276 + 4.01 0.000 intron (NM_017935, intron 6 of 16) intron (NM_017935, intron 6 of 16) 101329 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr16-5190 chr16 11261787 11261997 + 4.01 0.000 Intergenic AluJb|SINE|Alu -5710 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr3-7974 chr3 173544184 173544394 + 4.01 0.000 intron (NM_014932, intron 2 of 6) (GT)n|Simple_repeat|Simple_repeat -40145 NM_001365928 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr14-2739 chr14 99927952 99928162 + 4.01 0.000 intron (NM_004434, intron 17 of 21) (GTG)n|Simple_repeat|Simple_repeat -43365 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr6-5577 chr6 21920989 21921199 + 4.01 0.000 intron (NR_015410, intron 5 of 11) AluSc5|SINE|Alu 226099 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr2-11463 chr2 230486203 230486413 + 4.01 0.000 intron (NM_001080391, intron 17 of 28) L1PA8A|LINE|L1 69552 NM_001206704 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr10-7055 chr10 85114387 85114597 + 4.01 0.000 Intergenic AluSq2|SINE|Alu 84413 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr7-8775 chr7 80335905 80336115 + 4.01 0.000 Intergenic Intergenic 38429 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chr10-6402 chr10 6941171 6941381 + 4.01 0.000 Intergenic Intergenic 161678 NR_038291 100507127 Hs.498571 NR_038291 ENSG00000238266 LINC00707 - long intergenic non-protein coding RNA 707 ncRNA chr11-9657 chr11 66995498 66995708 + 4.01 0.000 Intergenic U3|snRNA|snRNA 20299 NM_001353554 254439 Hs.232604 NM_001136485 ENSG00000173237 C11orf86 - chromosome 11 open reading frame 86 protein-coding chr2-11638 chr2 5460059 5460269 + 4.01 0.000 Intergenic Intergenic 230954 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chrX-4726 chrX 90612547 90612757 + 4.01 0.000 Intergenic Intergenic 690744 NM_138960 90316 Hs.592220 NM_138960 ENSG00000153779 TGIF2LX TGIFLX TGFB induced factor homeobox 2 like X-linked protein-coding chr6-3637 chr6 131418166 131418376 + 4.01 0.000 Intergenic AluSg4|SINE|Alu -154955 NM_001244438 383 Hs.440934 NM_000045 ENSG00000118520 ARG1 - arginase 1 protein-coding chr3-10848 chr3 166650059 166650269 + 4.01 0.000 Intergenic AluSg4|SINE|Alu -248519 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr2-7390 chr2 7607647 7607857 + 4.01 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 186491 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr1-7902 chr1 155789124 155789334 + 4.01 0.000 intron (NM_032292, intron 12 of 20) L1ME2z|LINE|L1 -5397 NR_132767 106633816 NR_132767 SCARNA26B - small Cajal body-specific RNA 26B ncRNA chr6-5636 chr6 67363101 67363311 + 4.01 0.000 Intergenic Intergenic -692145 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr1-16026 chr1 200652819 200653029 + 4.01 0.000 intron (NM_001031725, intron 4 of 7) AluJb|SINE|Alu 13827 NM_001320182 83479 Hs.497332 NM_031306 ENSG00000118197 DDX59 OFD5|ZNHIT5 DEAD-box helicase 59 protein-coding chr15-4524 chr15 54526576 54526786 + 4.01 0.000 intron (NM_001329919, intron 24 of 31) AluY|SINE|Alu 514033 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr2-10249 chr2 117511646 117511856 + 4.01 0.000 Intergenic Intergenic -302940 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr8-6720 chr8 86583926 86584136 + 4.01 0.000 intron (NM_019098, intron 15 of 17) intron (NM_019098, intron 15 of 17) 69596 NM_003909 8895 Hs.191219 NM_003909 ENSG00000085719 CPNE3 CPN3|PRO1071 copine 3 protein-coding chr8-5868 chr8 13957175 13957385 + 4.01 0.000 Intergenic ERVL-B4-int|LTR|ERVL 327590 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr6-8244 chr6 137424944 137425154 + 4.01 0.000 Intergenic AluJb|SINE|Alu 69345 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr9-7688 chr9 71488584 71488794 + 4.01 0.000 Intergenic AluJo|SINE|Alu -41718 NM_001366144 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr8-5535 chr8 68960533 68960743 + 4.01 0.000 intron (NR_039986, intron 2 of 4) intron (NR_039986, intron 2 of 4) 143552 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr5-7467 chr5 32981213 32981423 + 4.01 0.000 Intergenic L1MA5|LINE|L1 33875 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr15-5246 chr15 98076571 98076781 + 4.01 0.000 Intergenic Intergenic 12077 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chr4-7690 chr4 87876919 87877129 + 4.01 0.000 Intergenic L1MDa|LINE|L1 42321 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr5-4444 chr5 3069928 3070138 + 4.01 0.000 Intergenic Intergenic -107802 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr15-4205 chr15 25749011 25749221 + 4.01 0.000 intron (NM_024490, intron 2 of 20) L1MEg|LINE|L1 99709 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr2-12459 chr2 59938507 59938717 + 4.01 0.000 Intergenic Intergenic 444424 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr7-7943 chr7 10577148 10577358 + 4.01 0.000 intron (NR_147499, intron 1 of 2) intron (NR_147499, intron 1 of 2) -125423 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr12-3911 chr12 126871920 126872130 + 4.01 0.000 intron (NR_033970, intron 2 of 2) AluYb9|SINE|Alu 2665 NR_033970 440117 Hs.127100 NR_033970 ENSG00000249873 LINC02372 - long intergenic non-protein coding RNA 2372 ncRNA chr10-7999 chr10 60820532 60820742 + 4.01 0.000 Intergenic Intergenic 42159 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr11-10385 chr11 113132257 113132467 + 4.01 0.000 intron (NM_181351, intron 1 of 18) intron (NM_181351, intron 1 of 18) 141539 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr2-10637 chr2 14864102 14864312 + 4.01 0.000 Intergenic AluSg|SINE|Alu 231490 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr13-2668 chr13 83697919 83698129 + 4.01 0.000 Intergenic Intergenic 184369 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr17-8184 chr17 62178608 62178818 + 4.01 0.000 Intergenic LTR16|LTR|ERVL 96942 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr12-7584 chr12 76643060 76643270 + 4.01 0.000 Intergenic MIRc|SINE|MIR -83394 NM_001319652 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding chr4-6944 chr4 17657419 17657629 + 4.01 0.000 intron (NM_015688, intron 10 of 17) intron (NM_015688, intron 10 of 17) 42883 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chr13-3214 chr13 23505044 23505254 + 4.01 0.000 Intergenic Intergenic 35637 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr3-9651 chr3 60726371 60726581 + 4.01 0.000 intron (NR_148921, intron 4 of 4) intron (NR_148921, intron 4 of 4) -108606 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr4-5959 chr4 165075470 165075680 + 4.01 0.000 3' UTR (NM_001100389, exon 6 of 6) 3' UTR (NM_001100389, exon 6 of 6) 37285 NM_001100389 201931 Hs.704511 NM_152681 ENSG00000170088 TMEM192 - transmembrane protein 192 protein-coding chr6-7213 chr6 39956882 39957092 + 4.01 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -22525 NR_033233 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding chr12-6547 chr12 116617676 116617886 + 4.01 0.000 Intergenic AluJb|SINE|Alu 58400 NM_001085481 643246 Hs.356061 NM_001085481 ENSG00000258102 MAP1LC3B2 ATG8G microtubule associated protein 1 light chain 3 beta 2 protein-coding chr7-7933 chr7 9382149 9382359 + 4.01 0.000 Intergenic AluSx1|SINE|Alu -252016 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr1-14073 chr1 29319810 29320020 + 4.01 0.000 intron (NM_133177, intron 26 of 30) intron (NM_133177, intron 26 of 30) 30199 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr2-11023 chr2 107364859 107365069 + 4.01 0.000 Intergenic Intergenic -15439 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr11-7561 chr11 20821130 20821340 + 4.01 0.000 intron (NM_001288714, intron 3 of 18) intron (NM_001288714, intron 3 of 18) 151649 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr4-6157 chr4 35182106 35182316 + 4.01 0.000 Intergenic L1PREC2|LINE|L1 -912464 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr7-9613 chr7 149393541 149393751 + 4.01 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 67416 NM_015694 27153 Hs.38512 NM_015694 ENSG00000196453 ZNF777 - zinc finger protein 777 protein-coding chr6-8192 chr6 133597423 133597633 + 4.01 0.000 intron (NR_109982, intron 4 of 8) MLT1A0|LTR|ERVL-MaLR -223619 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA chr8-7403 chr8 139902796 139903006 + 4.01 0.000 intron (NM_001160372, intron 20 of 22) intron (NM_001160372, intron 20 of 22) 197634 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr2-11062 chr2 117727682 117727892 + 4.01 0.000 Intergenic MIRb|SINE|MIR -86904 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr1-13983 chr1 25393102 25393312 + 4.01 0.000 intron (NM_138618, intron 3 of 8) L2a|LINE|L2 27707 NM_138618 6006 Hs.449968 NM_020485 ENSG00000188672 RHCE CD240CE|RH|RH30A|RHC|RHCe(152N)|RHE|RHIXB|RHNA|RHPI|Rh4|RhIVb(J)|RhVI|RhVIII Rh blood group CcEe antigens protein-coding chr3-10924 chr3 173124585 173124795 + 4.01 0.000 intron (NM_031955, intron 1 of 10) L2a|LINE|L2 16545 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chrX-5452 chrX 154450530 154450740 + 4.01 0.000 TTS (NM_004699) TTS (NM_004699) 315 NR_106917 102465517 NR_106917 ENSG00000276350 MIR6858 hsa-mir-6858 microRNA 6858 ncRNA chr6-6542 chr6 131800359 131800569 + 4.01 0.000 Intergenic AluJb|SINE|Alu -7556 NM_006208 5167 Hs.527295 NM_006208 ENSG00000197594 ENPP1 ARHR2|COLED|M6S1|NPP1|NPPS|PC-1|PCA1|PDNP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding chr17-7342 chr17 6269580 6269790 + 4.01 0.000 Intergenic Intergenic 165436 NM_001285399 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr10-7020 chr10 77692777 77692987 + 4.01 0.000 Intergenic Intergenic -55074 NM_001271522 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr11-9107 chr11 32516717 32516927 + 4.01 0.000 Intergenic AluJr4|SINE|Alu -67009 NM_001307929 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr6-5993 chr6 98225440 98225650 + 4.01 0.000 Intergenic Intergenic 201014 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr12-2778 chr12 57444370 57444580 + 4.01 0.000 intron (NM_005538, intron 1 of 1) AluSg|SINE|Alu 9691 NM_005538 3626 Hs.632722 NM_005538 ENSG00000175189 INHBC IHBC inhibin subunit beta C protein-coding chrX-1911 chrX 147863876 147864086 + 4.01 0.000 Intergenic HAL1|LINE|L1 47836 NR_024499 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr21-1565 chr21 13827001 13827211 + 4.01 0.000 Intergenic Intergenic 21258 NR_026755 54055 Hs.580910 NR_026755 ENSG00000228314 CYP4F29P 4F-se4[6:7:8]|C21orf15|CYP4F-se4[6:7:8]|CYP4F3LP cytochrome P450 family 4 subfamily F member 29, pseudogene pseudo chr4-7019 chr4 25422522 25422732 + 4.01 0.000 Intergenic AluJb|SINE|Alu 45364 NM_001286756 29945 Hs.152173 NM_013367 ENSG00000053900 ANAPC4 APC4 anaphase promoting complex subunit 4 protein-coding chr2-8114 chr2 79243037 79243247 + 4.01 0.000 Intergenic Intergenic -83389 NM_138937 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding chr7-4331 chr7 42041955 42042165 + 4.01 0.000 intron (NM_000168, intron 6 of 14) AluSc|SINE|Alu 195149 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr6-5950 chr6 77118515 77118725 + 4.01 0.000 Intergenic Intergenic 345402 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr20-3075 chr20 13261347 13261557 + 4.01 0.000 intron (NM_080826, intron 1 of 5) MLT1H2|LTR|ERVL-MaLR -21765 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr9-7463 chr9 27532827 27533037 + 4.01 0.000 Intergenic Intergenic -3118 NM_024761 79817 Hs.369022 NM_024761 ENSG00000120162 MOB3B C9orf35|MOB1D|MOBKL2B MOB kinase activator 3B protein-coding chr9-6475 chr9 92193375 92193585 + 4.01 0.000 Intergenic MER83B-int|LTR|ERV1 -2324 NM_001350291 138652 Hs.742918 NM_001350291 PRSS47 - serine protease 47 protein-coding chr5-8989 chr5 163843241 163843451 + 4.01 0.000 Intergenic AluJo|SINE|Alu 337727 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr2-10157 chr2 80217447 80217657 + 4.01 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) 87200 NM_178839 347730 Hs.591580 NM_178839 ENSG00000162951 LRRTM1 - leucine rich repeat transmembrane neuronal 1 protein-coding chr9-2744 chr9 97796686 97796896 + 4.01 0.000 intron (NR_147055, intron 5 of 10) SVA_D|Retroposon|SVA 56289 NR_147055 101928337 NR_147055 ENSG00000236130 PTCSC2 - papillary thyroid carcinoma susceptibility candidate 2 ncRNA chr1-10044 chr1 89942917 89943127 + 4.01 0.000 Intergenic MIRb|SINE|MIR 51944 NR_002830 492303 Hs.550796 NR_002830 GEMIN8P4 - gem nuclear organelle associated protein 8 pseudogene 4 pseudo chr1-10459 chr1 161182305 161182515 + 4.01 0.000 Intergenic L2|LINE|L2 -4442 NM_001199873 8703 Hs.321231 NM_003779 ENSG00000158850 B4GALT3 beta4Gal-T3 beta-1,4-galactosyltransferase 3 protein-coding chr2-12069 chr2 31792690 31792900 + 4.01 0.000 Intergenic Intergenic 11185 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA chr13-3892 chr13 53121121 53121331 + 4.01 0.000 Intergenic Intergenic 30674 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr5-9059 chr5 170651278 170651488 + 4.01 0.000 intron (NR_136214, intron 4 of 5) intron (NR_136214, intron 4 of 5) 30087 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr17-5168 chr17 9819859 9820069 + 4.01 0.000 intron (NM_001310219, intron 1 of 4) AluSp|SINE|Alu 2107 NM_001310219 644070 NM_001310219 ENSG00000214978 GSG1L2 - GSG1 like 2 protein-coding chr4-8425 chr4 153405210 153405420 + 4.01 0.000 intron (NM_032117, intron 6 of 7) AluY|SINE|Alu 60627 NM_032117 84057 Hs.294088 NM_032117 ENSG00000121211 MND1 GAJ meiotic nuclear divisions 1 protein-coding chr7-9401 chr7 131485538 131485748 + 4.01 0.000 intron (NM_001321316, intron 17 of 17) L1MC4|LINE|L1 70985 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr1-8033 chr1 233201007 233201217 + 4.01 0.000 intron (NM_014801, intron 13 of 33) L1PA8|LINE|L1 94613 NM_001328607 80003 Hs.370605 NM_014801 ENSG00000135749 PCNX2 PCNXL2 pecanex 2 protein-coding chr22-4156 chr22 45028896 45029106 + 4.01 0.000 Intergenic L2b|LINE|L2 -18996 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr8-5885 chr8 15877369 15877579 + 4.01 0.000 Intergenic MER54A|LTR|ERVL 308798 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr11-10277 chr11 103875128 103875338 + 4.01 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat 25327 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr11-8766 chr11 9342625 9342835 + 4.01 0.000 Intergenic AluSx|SINE|Alu -28137 NM_015012 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B - transmembrane protein 41B protein-coding chr3-10638 chr3 147549429 147549639 + 4.01 0.000 Intergenic MSTA|LTR|ERVL-MaLR 128207 NR_121655 440982 Hs.535724 NR_121655 LOC440982 - uncharacterized LOC440982 ncRNA chr3-10832 chr3 164309626 164309836 + 4.01 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -138175 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA chr6-7478 chr6 58134937 58135147 + 4.01 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -173596 NR_132995 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr5-8850 chr5 152074738 152074948 + 4.01 0.000 intron (NR_109876, intron 1 of 2) MER117|DNA|hAT-Charlie 115945 NR_109876 101927115 Hs.549665 NR_109876 ENSG00000254226 LINC01933 CTB-12O2.1 long intergenic non-protein coding RNA 1933 ncRNA chr20-2898 chr20 63382564 63382774 + 4.01 0.000 Intergenic Intergenic -21273 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr19-5357 chr19 5595866 5596076 + 4.01 0.000 intron (NM_014649, intron 13 of 20) intron (NM_014649, intron 13 of 20) 26805 NM_014649 9667 Hs.655392 NM_014649 ENSG00000130254 SAFB2 - scaffold attachment factor B2 protein-coding chrX-5463 chrX 155015594 155015804 + 4.01 0.000 intron (NM_000132, intron 1 of 25) L1PA16|LINE|L1 7024 NM_000132 2157 Hs.632836 NM_000132 ENSG00000185010 F8 AHF|DXS1253E|F8B|F8C|FVIII|HEMA coagulation factor VIII protein-coding chr5-7588 chr5 42549014 42549224 + 4.01 0.000 promoter-TSS (NM_001242404) promoter-TSS (NM_001242404) -437 NM_001242404 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr2-10296 chr2 132537334 132537544 + 4.01 0.000 intron (NM_001508, intron 1 of 1) L1PA8|LINE|L1 103728 NR_162099 113218485 NR_162099 MIR9986 - microRNA 9986 ncRNA chr3-9544 chr3 52874396 52874606 + 4.01 0.000 intron (NM_001198974, intron 1 of 9) L1ME3G|LINE|L1 23047 NM_001198974 100526772 NM_001198974 ENSG00000248592 STIMATE-MUSTN1 TMEM110-MUSTN1 STIMATE-MUSTN1 readthrough protein-coding chr2-11567 chr2 663428 663638 + 4.01 0.000 TTS (NM_001352681) TTS (NM_001352681) 13171 NM_001352681 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding KI270908.1-2 KI270908.1 894820 895030 + 4.01 0.000 NA NA NA NA chr5-4906 chr5 71709306 71709516 + 4.01 0.000 Intergenic Intergenic -9864 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr14-5143 chr14 90745205 90745415 + 4.01 0.000 intron (NM_001320421, intron 3 of 20) AluJo|SINE|Alu 47977 NR_135190 105370622 Hs.662373 NR_135190 ENSG00000258716 LOC105370622 - uncharacterized LOC105370622 ncRNA chrX-3680 chrX 105705128 105705338 + 4.01 0.000 intron (NM_017416, intron 6 of 10) (ATAG)n|Simple_repeat|Simple_repeat -117306 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr18-2508 chr18 61782618 61782828 + 4.01 0.000 Intergenic Intergenic 34547 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr1-14749 chr1 67544652 67544862 + 4.01 0.000 Intergenic Intergenic -114355 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr13-3500 chr13 20678613 20678823 + 4.01 0.000 intron (NR_148465, intron 20 of 20) MER9B|LTR|ERVK -24625 NM_138284 53342 Hs.655142 NM_138284 ENSG00000172458 IL17D IL-17D interleukin 17D protein-coding chr13-3073 chr13 42439610 42439820 + 4.01 0.000 intron (NR_135319, intron 3 of 3) (TG)n|Simple_repeat|Simple_repeat 14823 NR_135319 105370177 NR_135319 ENSG00000283554 LINC02341 - long intergenic non-protein coding RNA 2341 ncRNA chr12-4769 chr12 53033246 53033456 + 4.01 0.000 intron (NM_001330654, intron 7 of 13) AluSc|SINE|Alu -13675 NM_198316 23371 Hs.6147 NM_015319 ENSG00000111077 TNS2 C1-TEN|C1TEN|TENC1 tensin 2 protein-coding chrX-1712 chrX 20513890 20514100 + 4.01 0.000 Intergenic Intergenic -247086 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr1-7529 chr1 170045985 170046195 + 4.01 0.000 intron (NM_001204514, intron 3 of 20) LTR26C|LTR|ERV1 22825 NM_001204517 22920 Hs.433442 NM_014970 ENSG00000075945 KIFAP3 FLA3|KAP-1|KAP-3|KAP3|SMAP|Smg-GDS|dJ190I16.1 kinesin associated protein 3 protein-coding chr19-5281 chr19 58085321 58085531 + 4.01 0.000 intron (NM_001145543, intron 6 of 6) CpG 12805 NM_001145544 65982 Hs.235390 NM_023926 ENSG00000121413 ZSCAN18 ZNF447 zinc finger and SCAN domain containing 18 protein-coding chr4-7745 chr4 93051609 93051819 + 4.01 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 747315 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr2-10247 chr2 114950286 114950496 + 4.01 0.000 intron (NM_001321910, intron 2 of 26) AluY|SINE|Alu -114182 NM_001178037 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr18-3324 chr18 56229625 56229835 + 4.01 0.000 Intergenic L2a|LINE|L2 -38468 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr6-6748 chr6 2752901 2753111 + 4.01 0.000 intron (NM_001347872, intron 1 of 12) intron (NM_001347872, intron 1 of 12) -2084 NM_001012418 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr21-1903 chr21 44534613 44534823 + 4.01 0.000 intron (NM_144991, intron 2 of 11) L1MB3|LINE|L1 5477 NM_198691 386677 Hs.688631 NM_198691 ENSG00000215455 KRTAP10-1 KAP10.1|KAP18-1|KAP18.1|KRTAP10.1|KRTAP18-1|KRTAP18.1 keratin associated protein 10-1 protein-coding chr2-10692 chr2 25432244 25432454 + 4.01 0.000 intron (NM_001351385, intron 13 of 17) intron (NM_001351385, intron 13 of 17) -89759 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr1-12235 chr1 213875289 213875499 + 4.01 0.000 intron (NR_037850, intron 4 of 5) intron (NR_037850, intron 4 of 5) -49355 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr1-13015 chr1 161565859 161566069 + 4.01 0.000 Intergenic AluYa5|SINE|Alu -15227 NM_001329120 2214 Hs.372679 NM_000569 ENSG00000203747 FCGR3A CD16|CD16A|FCG3|FCGR3|FCGRIII|FCR-10|FCRIII|FCRIIIA|IGFR3|IMD20 Fc fragment of IgG receptor IIIa protein-coding chr2-13745 chr2 169302375 169302585 + 4.01 0.000 intron (NM_004525, intron 4 of 78) MER20|DNA|hAT-Charlie 60054 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr3-7070 chr3 176917203 176917413 + 4.01 0.000 Intergenic MER92D|LTR|ERV1 -100307 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr19-4763 chr19 30156918 30157128 + 4.01 0.000 Intergenic Intergenic 214784 NM_003796 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr13-1961 chr13 109875094 109875304 + 4.01 0.000 Intergenic Intergenic -88616 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr5-7962 chr5 81626422 81626632 + 4.01 0.000 intron (NM_012446, intron 3 of 16) intron (NM_012446, intron 3 of 16) 124726 NM_001256736 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr10-8760 chr10 104245064 104245274 + 4.01 0.000 Intergenic LTR12C|LTR|ERV1 -9025 NM_001191003 9446 Hs.190028 NM_004832 ENSG00000148834 GSTO1 GSTO 1-1|GSTTLp28|HEL-S-21|P28|SPG-R glutathione S-transferase omega 1 protein-coding chr6-6994 chr6 20379972 20380182 + 4.01 0.000 Intergenic Intergenic -21802 NM_001949 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chr3-10746 chr3 156016879 156017089 + 4.01 0.000 Intergenic Intergenic -103564 NM_001308217 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chrX-5018 chrX 119344893 119345103 + 4.01 0.000 Intergenic L2a|LINE|L2 53469 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr1-11742 chr1 16634742 16634952 + 4.01 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -3941 NR_026752 84809 Hs.631865 NR_026752 ENSG00000215908 CROCCP2 CROCCL1 CROCC pseudogene 2 pseudo chr4-7592 chr4 80926521 80926731 + 4.01 0.000 intron (NM_152770, intron 4 of 5) intron (NM_152770, intron 4 of 5) -104082 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr12-7226 chr12 50732828 50733038 + 4.01 0.000 intron (NM_173602, intron 32 of 37) AluSz|SINE|Alu -31168 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr20-2310 chr20 6813668 6813878 + 4.01 0.000 Intergenic Intergenic 46087 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr14-5294 chr14 100884372 100884582 + 4.01 0.000 promoter-TSS (NR_029699) promoter-TSS (NR_029699) -6 NR_030173 574451 NR_030173 ENSG00000272458 MIR432 MIRN432|hsa-mir-432|mir-432 microRNA 432 ncRNA chr12-6063 chr12 114736682 114736892 + 4.01 0.000 Intergenic CpG -52612 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr8-3390 chr8 61088309 61088519 + 4.01 0.000 Intergenic AluSz|SINE|Alu -120666 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chrX-3270 chrX 96400230 96400440 + 4.01 0.000 Intergenic AluSz|SINE|Alu -62433 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr9-7604 chr9 37034247 37034457 + 4.01 0.000 promoter-TSS (NR_104000) promoter-TSS (NR_104000) -84 NR_104000 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr14-5071 chr14 84167967 84168177 + 4.01 0.000 Intergenic Intergenic -1103860 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr2-7453 chr2 13023625 13023835 + 4.01 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -16717 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr11-8035 chr11 18190748 18190958 + 4.01 0.000 Intergenic Intergenic 18016 NM_054032 117196 Hs.632138 NM_054032 ENSG00000179817 MRGPRX4 GPCR|MRGX4|SNSR6 MAS related GPR family member X4 protein-coding chr11-9624 chr11 66148946 66149156 + 4.01 0.000 intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 78779 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr2-10381 chr2 176168179 176168389 + 4.01 0.000 intron (NM_006898, intron 2 of 3) intron (NM_006898, intron 2 of 3) 9845 NR_110464 401022 Hs.98661 NR_033979 ENSG00000224189 HAGLR HOXD-AS1|MIR7704HG|Mdgt HOXD antisense growth-associated long non-coding RNA ncRNA chr1-12669 chr1 46074245 46074455 + 4.01 0.000 intron (NM_001328654, intron 1 of 7) ERVL-B4-int|LTR|ERVL 56323 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chrX-4817 chrX 101845021 101845231 + 4.01 0.000 intron (NR_159739, intron 1 of 18) intron (NR_159739, intron 1 of 18) 12451 NR_159736 55998 Hs.307077 NM_032946 ENSG00000126952 NXF5 - nuclear RNA export factor 5 protein-coding chr1-10571 chr1 174273843 174274053 + 4.01 0.000 intron (NM_001366445, intron 8 of 13) intron (NM_001366445, intron 8 of 13) -1152 NM_001366449 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr5-3536 chr5 18232588 18232798 + 4.01 0.000 Intergenic Intergenic 425419 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr5-8983 chr5 163210090 163210300 + 4.01 0.000 Intergenic L1PA7|LINE|L1 -227376 NR_157054 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr22-2133 chr22 37964279 37964489 + 4.01 0.000 intron (NR_125371, intron 3 of 4) intron (NR_125371, intron 3 of 4) -3179 NR_106878 102465492 NR_106878 ENSG00000284289 MIR6820 hsa-mir-6820 microRNA 6820 ncRNA chr15-4076 chr15 70449635 70449845 + 4.01 0.000 Intergenic Intergenic 56188 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr18-3186 chr18 45009746 45009956 + 4.01 0.000 intron (NM_015559, intron 4 of 5) MIRc|SINE|MIR -39685 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr5-5791 chr5 175008567 175008777 + 4.01 0.000 Intergenic Intergenic -12941 NR_046113 441116 Hs.533036 NM_001004348 ENSG00000204754 LINC01951 - long intergenic non-protein coding RNA 1951 ncRNA chr20-3339 chr20 24969718 24969928 + 4.01 0.000 intron (NM_020531, intron 6 of 8) intron (NM_020531, intron 6 of 8) 20554 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr19-7026 chr19 50062477 50062687 + 4.01 0.000 intron (NR_138096, intron 2 of 4) AluJb|SINE|Alu 11993 NR_138096 400710 Hs.628968 NR_027257 ENSG00000204666 LOC400710 - uncharacterized LOC400710 ncRNA chr11-7509 chr11 6100240 6100450 + 4.01 0.000 Intergenic Intergenic -7339 NM_001005181 196335 Hs.632154 NM_001005181 ENSG00000180919 OR56B4 OR11-67 olfactory receptor family 56 subfamily B member 4 protein-coding chr2-10285 chr2 129488840 129489050 + 4.01 0.000 Intergenic MIRc|SINE|MIR -215054 NR_122041 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA chr4-7951 chr4 110272083 110272293 + 4.01 0.000 Intergenic MLT2B4|LTR|ERVL -73573 NM_001130721 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr8-7366 chr8 137322179 137322389 + 4.01 0.000 Intergenic Intergenic 91304 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr16-5957 chr16 4282857 4283067 + 4.01 0.000 Intergenic AluYk4|SINE|Alu -9939 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chr17-7411 chr17 9421992 9422202 + 4.01 0.000 intron (NM_004853, intron 6 of 7) MSTA|LTR|ERVL-MaLR 153723 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr8-7526 chr8 144035225 144035435 + 4.01 0.000 intron (NM_198572, intron 1 of 4) intron (NM_198572, intron 1 of 4) -14068 NR_158554 392275 NR_158554 SMPD5 MA-nSMase sphingomyelin phosphodiesterase 5 pseudo chr17-4262 chr17 60688710 60688920 + 4.01 0.000 intron (NM_001330413, intron 3 of 25) AluSx3|SINE|Alu 10964 NM_001330414 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr1-15238 chr1 112064741 112064951 + 4.01 0.000 Intergenic Intergenic 74310 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA chr4-8019 chr4 117666392 117666602 + 4.01 0.000 intron (NR_125757, intron 3 of 3) intron (NR_125757, intron 3 of 3) -167904 NR_147154 105377391 Hs.148448 NR_147154 ENSG00000229565 LINC02264 - long intergenic non-protein coding RNA 2264 ncRNA chr7-4619 chr7 25019177 25019387 + 4.01 0.000 Intergenic SVA_F|Retroposon|SVA -39104 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr9-8268 chr9 112422718 112422928 + 4.01 0.000 intron (NR_036651, intron 5 of 9) L1MEj|LINE|L1 42715 NM_032303 84263 Hs.59486 NM_032303 ENSG00000119471 HSDL2 C9orf99|SDR13C1 hydroxysteroid dehydrogenase like 2 protein-coding chr6-8451 chr6 153804898 153805108 + 4.01 0.000 Intergenic Intergenic -205493 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr7-8554 chr7 56723039 56723249 + 4.01 0.000 Intergenic L1MB8|LINE|L1 89592 NR_130727 401357 Hs.457696 NR_130727 LOC401357 - uncharacterized LOC401357 ncRNA chr11-9231 chr11 41300524 41300734 + 4.01 0.000 intron (NM_001258419, intron 1 of 6) intron (NM_001258419, intron 1 of 6) 159007 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr5-8107 chr5 97494701 97494911 + 4.01 0.000 Intergenic L2|LINE|L2 -9890 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA chr3-7396 chr3 88641044 88641254 + 4.01 0.000 Intergenic LTR41C|LTR|ERVL 302693 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr9-5039 chr9 29651246 29651456 + 4.01 0.000 Intergenic (TATTTA)n|Simple_repeat|Simple_repeat -437750 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr4-7121 chr4 36083874 36084084 + 4.01 0.000 intron (NR_146894, intron 28 of 32) MLT2A2|LTR|ERVL 159960 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr18-3159 chr18 42365436 42365646 + 4.01 0.000 intron (NR_046174, intron 4 of 9) intron (NR_046174, intron 4 of 9) 178873 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr5-6148 chr5 38055375 38055585 + 4.01 0.000 intron (NR_147009, intron 2 of 2) L3|LINE|CR1 29783 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr18-3410 chr18 62655849 62656059 + 4.01 0.000 Intergenic MSTB2|LTR|ERVL-MaLR -59587 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chrX-4837 chrX 103395072 103395282 + 4.01 0.000 Intergenic Intergenic 18139 NM_014380 27018 Hs.448588 NM_014380 ENSG00000166681 BEX3 Bex|DXS6984E|HGR74|NADE|NGFRAP1 brain expressed X-linked 3 protein-coding chr2-10058 chr2 38260784 38260994 + 4.01 0.000 Intergenic Intergenic 115641 NM_001330459 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr4-8066 chr4 122050373 122050583 + 4.01 0.000 Intergenic L3|LINE|CR1 -98418 NM_001130698 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr3-10573 chr3 141578442 141578652 + 4.01 0.000 intron (NM_006506, intron 15 of 23) intron (NM_006506, intron 15 of 23) -84652 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr1-11274 chr1 5485625 5485835 + 4.01 0.000 Intergenic Intergenic 377011 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr7-8699 chr7 74246894 74247104 + 4.01 0.000 intron (NM_001278792, intron 3 of 9) AluYc|SINE|Alu 7400 NM_181471 5982 Hs.647062 NM_002914 ENSG00000049541 RFC2 RFC40 replication factor C subunit 2 protein-coding chr5-7847 chr5 71810106 71810316 + 4.01 0.000 Intergenic Intergenic 90936 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr5-8597 chr5 138322487 138322697 + 4.01 0.000 intron (NM_022809, intron 3 of 10) AluY|SINE|Alu 9212 NM_001287582 995 Hs.656 NM_001790 ENSG00000158402 CDC25C CDC25|PPP1R60 cell division cycle 25C protein-coding chr17-7555 chr17 19016692 19016902 + 4.01 0.000 intron (NM_001270648, intron 10 of 13) intron (NM_001270648, intron 10 of 13) -12033 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr2-9781 chr2 111136185 111136395 + 4.01 0.000 intron (NM_138625, intron 3 of 4) L1MD2|LINE|L1 15376 NM_138623 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr13-4227 chr13 94941763 94941973 + 4.01 0.000 Intergenic AluJb|SINE|Alu -18173 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr2-14247 chr2 212110738 212110948 + 4.01 0.000 intron (NM_001042599, intron 2 of 26) intron (NM_001042599, intron 2 of 26) 315517 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr7-4763 chr7 74412561 74412771 + 4.01 0.000 Intergenic AluSz|SINE|Alu -41240 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr8-7210 chr8 126488513 126488723 + 4.01 0.000 Intergenic L1PB1|LINE|L1 69860 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr3-9829 chr3 75850606 75850816 + 4.01 0.000 Intergenic L1PA5|LINE|L1 -65162 NM_001324026 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr9-8827 chr9 135285731 135285941 + 4.01 0.000 Intergenic Intergenic -57413 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr4-7900 chr4 105957380 105957590 + 4.01 0.000 intron (NM_001184692, intron 8 of 10) intron (NM_001184692, intron 8 of 10) 62014 NM_001184692 255743 Hs.518921 NM_198278 ENSG00000168743 NPNT EGFL6L|POEM nephronectin protein-coding chr4-7969 chr4 112728268 112728478 + 4.01 0.000 intron (NM_001354269, intron 1 of 43) L1MA8|LINE|L1 22355 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr16-2779 chr16 27164452 27164662 + 4.01 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -38969 NM_024773 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr18-2785 chr18 2676468 2676678 + 4.01 0.000 intron (NM_015295, intron 5 of 47) L2a|LINE|L2 20686 NM_015295 23347 Hs.8118 NM_015295 ENSG00000101596 SMCHD1 BAMS|FSHD2 structural maintenance of chromosomes flexible hinge domain containing 1 protein-coding chr3-10443 chr3 132606567 132606777 + 4.01 0.000 intron (NR_132428, intron 9 of 17) L1PA7|LINE|L1 6535 NM_178445 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr3-8614 chr3 168100945 168101155 + 4.01 0.000 Intergenic Intergenic -5126 NM_001308155 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chrX-1802 chrX 87341355 87341565 + 4.01 0.000 Intergenic AluSz|SINE|Alu -176342 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr1-15061 chr1 95319968 95320178 + 4.01 0.000 Intergenic Intergenic -1810 NR_135588 100996630 Hs.662270 NR_135588 ENSG00000228504 LINC01760 - long intergenic non-protein coding RNA 1760 ncRNA chr13-2000 chr13 31997286 31997496 + 4.01 0.000 Intergenic AluSg|SINE|Alu 34248 NR_103839 100507099 Hs.536364 NR_103839 FRY-AS1 - FRY antisense RNA 1 ncRNA chr5-8095 chr5 96209458 96209668 + 4.01 0.000 intron (NR_130776, intron 1 of 4) L1PA15|LINE|L1 130425 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr3-8133 chr3 26558304 26558514 + 4.01 0.000 Intergenic LTR16E1|LTR|ERVL -64397 NM_052953 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr2-9772 chr2 106800581 106800791 + 4.01 0.000 TTS (NM_001142351) TTS (NM_001142351) 85342 NR_136313 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr3-9776 chr3 70972317 70972527 + 4.01 0.000 intron (NM_001244810, intron 17 of 20) intron (NM_001244810, intron 17 of 20) 92502 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr3-8337 chr3 72098805 72099015 + 4.01 0.000 intron (NR_104116, intron 2 of 6) LTR16A|LTR|ERVL 1545 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr5-9110 chr5 173283834 173284044 + 4.01 0.000 Intergenic CpG -19791 NR_162132 113219469 NR_162132 MIR12118 - microRNA 12118 ncRNA chr7-7392 chr7 69545948 69546158 + 4.01 0.000 Intergenic AluSz|SINE|Alu 51571 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr1-8508 chr1 154024495 154024705 + 4.01 0.000 intron (NM_001159484, intron 30 of 37) AluJr|SINE|Alu 33838 NM_001030 6232 Hs.546291 NM_001030 ENSG00000177954 RPS27 DBA17|MPS-1|MPS1|S27 ribosomal protein S27 protein-coding chr13-4453 chr13 112665860 112666070 + 4.01 0.000 intron (NM_207440, intron 1 of 2) intron (NM_207440, intron 1 of 2) 18921 NM_207440 400165 Hs.591213 NM_207440 ATP11AUN C13orf35|SMABLO1 ATP11A upstream neighbor protein-coding chrX-3912 chrX 9299565 9299775 + 4.01 0.000 Intergenic Intergenic -163625 NM_001139468 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr13-3913 chr13 55566906 55567116 + 4.01 0.000 Intergenic Intergenic 392557 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr2-14069 chr2 198106350 198106560 + 4.01 0.000 intron (NM_006226, intron 5 of 5) intron (NM_006226, intron 5 of 5) 268642 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr3-8721 chr3 193334739 193334949 + 4.01 0.000 intron (NM_198505, intron 10 of 29) intron (NM_198505, intron 10 of 29) 27600 NR_046758 100874218 Hs.407490 NR_046758 ATP13A5-AS1 - ATP13A5 antisense RNA 1 ncRNA chr7-8621 chr7 69215208 69215418 + 4.01 0.000 Intergenic AluY|SINE|Alu 382311 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr8-6252 chr8 40867443 40867653 + 4.01 0.000 intron (NM_024645, intron 1 of 6) L2a|LINE|L2 30278 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr4-8735 chr4 184881728 184881938 + 4.01 0.000 Intergenic L2a|LINE|L2 17628 NR_039976 100506229 Hs.378150 NR_039975 LINC01093 - long intergenic non-protein coding RNA 1093 ncRNA chr20-3753 chr20 19309629 19309839 + 4.01 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -25138 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr16-5067 chr16 73214793 73215003 + 4.01 0.000 Intergenic Intergenic -70451 NM_207385 388289 Hs.371893 NM_207385 C16orf47 - chromosome 16 open reading frame 47 protein-coding chr14-4756 chr14 62399164 62399374 + 4.01 0.000 Intergenic L1M1|LINE|L1 -259296 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr15-3883 chr15 93904421 93904631 + 4.01 0.000 TTS (NR_120320) TTS (NR_120320) 3825 NR_120323 101927129 Hs.652658 NR_120322 ENSG00000258785 LINC01580 - long intergenic non-protein coding RNA 1580 ncRNA chr1-14423 chr1 45078413 45078623 + 4.01 0.000 intron (NM_020883, intron 2 of 13) L1MA2|LINE|L1 66264 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr3-9926 chr3 87737695 87737905 + 4.01 0.000 Intergenic Harlequin-int|LTR|ERV1 -54906 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr14-4343 chr14 23237774 23237984 + 3.89 0.000 promoter-TSS (NM_001282322) promoter-TSS (NM_001282322) -57 NM_001282322 100507650 NM_001282322 ENSG00000215277 RNF212B C14orf164 ring finger protein 212B protein-coding chr2-10421 chr2 197472828 197473038 + 3.89 0.000 intron (NM_001320820, intron 4 of 4) intron (NM_001320820, intron 4 of 4) 13970 NR_132787 106635539 NR_132787 SNORA105A - small nucleolar RNA, H/ACA box 105A snoRNA chr5-8046 chr5 91624976 91625186 + 3.89 0.000 Intergenic L1MCb|LINE|L1 -241764 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr12-7063 chr12 41339087 41339297 + 3.89 0.000 intron (NM_001164595, intron 3 of 9) L1MA3|LINE|L1 -98547 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr17-4255 chr17 51144250 51144460 + 3.89 0.000 Intergenic Intergenic -9181 NR_037149 654364 Hs.463456 NM_001018136 ENSG00000011052 NME1-NME2 NM23-LV|NMELV NME1-NME2 readthrough protein-coding chr6-7347 chr6 46749073 46749283 + 3.89 0.000 intron (NM_001162435, intron 1 of 4) intron (NM_001162435, intron 1 of 4) 2261 NM_001162435 100287718 Hs.736491 NM_001162435 ENSG00000230062 ANKRD66 - ankyrin repeat domain 66 protein-coding chr19-4750 chr19 29017697 29017907 + 3.89 0.000 Intergenic Intergenic 15247 NR_040036 100505835 Hs.176539 NR_040036 ENSG00000267014 LINC01532 - long intergenic non-protein coding RNA 1532 ncRNA chr1-15173 chr1 108601916 108602126 + 3.89 0.000 intron (NM_001010883, intron 2 of 10) L2a|LINE|L2 41921 NM_001010883 284611 Hs.200230 NM_001010883 ENSG00000162636 FAM102B SYM-3B family with sequence similarity 102 member B protein-coding chr8-5394 chr8 26220606 26220816 + 3.89 0.000 Intergenic Intergenic -70797 NM_002717 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr14-4472 chr14 35021361 35021571 + 3.89 0.000 intron (NM_003136, intron 13 of 15) AluSz|SINE|Alu -23441 NM_001079519 283635 Hs.446357 NM_173607 ENSG00000151327 FAM177A1 C14orf24 family with sequence similarity 177 member A1 protein-coding chr20-4275 chr20 49736323 49736533 + 3.89 0.000 Intergenic AluYm1|SINE|Alu -22550 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr1-12008 chr1 95276836 95277046 + 3.89 0.000 Intergenic MER58B|DNA|hAT-Charlie 41322 NR_135588 100996630 Hs.662270 NR_135588 ENSG00000228504 LINC01760 - long intergenic non-protein coding RNA 1760 ncRNA chr20-2949 chr20 22409515 22409725 + 3.89 0.000 intron (NR_027089, intron 1 of 3) intron (NR_027089, intron 1 of 3) 11023 NR_027089 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr14-3780 chr14 56648939 56649149 + 3.89 0.000 3' UTR (NM_017799, exon 16 of 16) 3' UTR (NM_017799, exon 16 of 16) 69246 NM_017799 54916 Hs.497253 NM_017799 ENSG00000070269 TMEM260 C14orf101|SHDRA transmembrane protein 260 protein-coding chr17-8369 chr17 74538351 74538561 + 3.89 0.000 Intergenic Intergenic -6981 NM_174892 124599 Hs.313343 NM_174892 ENSG00000178789 CD300LB CD300b|CLM-7|CLM7|CMRF35-A2|IREM-3|IREM3|TREM-5|TREM5 CD300 molecule like family member b protein-coding chr4-3778 chr4 97452649 97452859 + 3.89 0.000 intron (NR_102713, intron 3 of 5) MER52A|LTR|ERV1 85828 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr3-9018 chr3 20866685 20866895 + 3.89 0.000 Intergenic SVA_D|Retroposon|SVA 524322 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr19-5777 chr19 31784267 31784477 + 3.89 0.000 Intergenic Intergenic 192091 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr22-3850 chr22 32729674 32729884 + 3.89 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -71037 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr4-7937 chr4 109057276 109057486 + 3.89 0.000 intron (NM_198721, intron 3 of 36) AluSx|SINE|Alu 245277 NR_045756 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr1-16517 chr1 230602773 230602983 + 3.89 0.000 Intergenic HERVH-int|LTR|ERV1 -7295 NR_146479 101927553 Hs.680219 NR_146479 ENSG00000232964 LINC01737 - long intergenic non-protein coding RNA 1737 ncRNA chr20-4241 chr20 48490365 48490575 + 3.89 0.000 Intergenic Intergenic 130559 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr11-6952 chr11 113025716 113025926 + 3.89 0.000 intron (NM_181351, intron 1 of 18) (GA)n|Simple_repeat|Simple_repeat -62361 NR_120563 101928847 Hs.711235 NR_120563 ENSG00000247416 LOC101928847 - uncharacterized LOC101928847 ncRNA chr1-14457 chr1 47129795 47130005 + 3.89 0.000 Intergenic HERV17-int|LTR|ERV1 -7525 NM_001308102 284541 Hs.726474 NM_001010969 ENSG00000162365 CYP4A22 - cytochrome P450 family 4 subfamily A member 22 protein-coding chr3-4773 chr3 110830654 110830864 + 3.89 0.000 Intergenic L1MB8|LINE|L1 239200 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr16-5071 chr16 74684377 74684587 + 3.89 0.000 intron (NM_152649, intron 5 of 10) intron (NM_152649, intron 5 of 10) 16380 NM_152649 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr15-2685 chr15 79727044 79727254 + 3.89 0.000 Intergenic L1PA16|LINE|L1 169848 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr9-6786 chr9 31918471 31918681 + 3.89 0.000 Intergenic AluSc|SINE|Alu -466027 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr7-8852 chr7 88389953 88390163 + 3.89 0.000 Intergenic THE1C|LTR|ERVL-MaLR -83164 NM_024636 79689 Hs.521008 NM_024636 ENSG00000127954 STEAP4 STAMP2|SchLAH|TIARP|TNFAIP9 STEAP4 metalloreductase protein-coding chr8-5642 chr8 107763009 107763219 + 3.89 0.000 Intergenic Intergenic -265196 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr14-4777 chr14 64394062 64394272 + 3.89 0.000 intron (NM_005956, intron 1 of 27) intron (NM_005956, intron 1 of 27) 5814 NM_005956 4522 Hs.652308 NM_005956 ENSG00000100714 MTHFD1 CIMAH|MTHFC|MTHFD methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 protein-coding chr9-7123 chr9 131198944 131199154 + 3.89 0.000 intron (NM_001318324, intron 29 of 35) intron (NM_001318324, intron 29 of 35) 8910 NM_001318325 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr9-6341 chr9 11495756 11495966 + 3.89 0.000 Intergenic Intergenic 882655 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr4-4398 chr4 42451031 42451241 + 3.89 0.000 intron (NM_001105529, intron 29 of 35) L2a|LINE|L2 53648 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr11-7693 chr11 68144865 68145075 + 3.89 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -23579 NM_212469 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr15-1803 chr15 94730538 94730748 + 3.89 0.000 Intergenic Intergenic -124720 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr12-7778 chr12 96118077 96118287 + 3.89 0.000 Intergenic AluSc|SINE|Alu -74662 NM_001256643 4048 Hs.524648 NM_000895 ENSG00000111144 LTA4H - leukotriene A4 hydrolase protein-coding chrX-5033 chrX 121260509 121260719 + 3.89 0.000 Intergenic MER77|LTR|ERVL -110358 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr4-8069 chr4 122472239 122472449 + 3.89 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -15849 NM_000586 3558 Hs.89679 NM_000586 ENSG00000109471 IL2 IL-2|TCGF|lymphokine interleukin 2 protein-coding chr6-3590 chr6 76744755 76744965 + 3.89 0.000 Intergenic SVA_F|Retroposon|SVA -151237 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr2-13352 chr2 135244027 135244237 + 3.89 0.000 intron (NM_001286569, intron 13 of 21) intron (NM_001286569, intron 13 of 21) 107504 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr7-9416 chr7 132409584 132409794 + 3.89 0.000 intron (NM_001105543, intron 3 of 3) intron (NM_001105543, intron 3 of 3) 148828 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr16-3752 chr16 21157099 21157309 + 3.89 0.000 intron (NM_017539, intron 1 of 61) intron (NM_017539, intron 1 of 61) -1470 NR_125971 57146 Hs.258212 NM_020422 ENSG00000011638 TMEM159 - transmembrane protein 159 protein-coding chr1-11845 chr1 35819628 35819838 + 3.89 0.000 intron (NR_146062, intron 2 of 19) AluSx4|SINE|Alu 11717 NM_017629 192670 Hs.744858 NM_017629 ENSG00000134698 AGO4 EIF2C4 argonaute RISC component 4 protein-coding chr6-8599 chr6 167423077 167423287 + 3.89 0.000 Intergenic Intergenic -38672 NR_163195 6953 Hs.351 NM_004610 ENSG00000203690 TCP10 TCP10A t-complex 10 pseudo chr3-9336 chr3 46028892 46029102 + 3.89 0.000 Intergenic L1M4|LINE|L1 -1514 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr5-7045 chr5 168633308 168633518 + 3.89 0.000 Intergenic L1PA5|LINE|L1 -54045 NM_024594 79646 Hs.388400 NM_024594 ENSG00000120137 PANK3 - pantothenate kinase 3 protein-coding chr2-6875 chr2 80763291 80763501 + 3.89 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 450017 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr20-3534 chr20 941318 941528 + 3.89 0.000 Intergenic Intergenic -25089 NM_001322809 51378 Hs.278973 NM_015985 ENSG00000101280 ANGPT4 ANG3|ANG4 angiopoietin 4 protein-coding chr12-7032 chr12 38631285 38631495 + 3.89 0.000 Intergenic Intergenic 274201 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr15-5248 chr15 98331166 98331376 + 3.89 0.000 intron (NR_146567, intron 1 of 2) intron (NR_146567, intron 1 of 2) 287 NR_146566 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chr13-2565 chr13 66927413 66927623 + 3.89 0.000 intron (NM_001318372, intron 2 of 4) L1PA13|LINE|L1 -49871 NR_046636 100874086 Hs.577908 NR_046636 ENSG00000225263 PCDH9-AS3 - PCDH9 antisense RNA 3 ncRNA chr14-5026 chr14 79093533 79093743 + 3.89 0.000 intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -106344 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr14-5338 chr14 102860237 102860447 + 3.89 0.000 intron (NM_145725, intron 2 of 11) MER41-int|LTR|ERV1 -62314 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr1-14835 chr1 75809588 75809798 + 3.89 0.000 intron (NM_002440, intron 3 of 19) AluSz|SINE|Alu 12811 NM_002440 4438 Hs.216639 NM_002440 ENSG00000057468 MSH4 - mutS homolog 4 protein-coding chr11-10399 chr11 113803598 113803808 + 3.89 0.000 intron (NM_001346268, intron 18 of 20) intron (NM_001346268, intron 18 of 20) 23907 NM_001101389 644672 Hs.705360 NM_001101389 ENSG00000228607 CLDN25 - claudin 25 protein-coding chr2-6644 chr2 2731809 2732019 + 3.89 0.000 Intergenic Intergenic 394112 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr5-7474 chr5 33454502 33454712 + 3.89 0.000 intron (NM_152295, intron 4 of 18) Charlie29a|DNA|hAT-Charlie 13831 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr14-5048 chr14 81246844 81247054 + 3.89 0.000 Intergenic L1MA5A|LINE|L1 -25559 NM_201595 2957 Hs.592334 NM_015859 ENSG00000165417 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA subunit 1 protein-coding chr8-5193 chr8 105554472 105554682 + 3.89 0.000 intron (NM_001362837, intron 3 of 7) intron (NM_001362837, intron 3 of 7) 235034 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr9-5159 chr9 38762208 38762418 + 3.89 0.000 Intergenic Intergenic 141225 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr1-16305 chr1 215877695 215877905 + 3.89 0.000 exon (NM_206933, exon 43 of 72) exon (NM_206933, exon 43 of 72) -194665 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr2-9815 chr2 145509228 145509438 + 3.89 0.000 Intergenic L1MA2|LINE|L1 841366 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr4-7350 chr4 57351321 57351531 + 3.89 0.000 Intergenic L1PA15|LINE|L1 -74446 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr9-6217 chr9 109233430 109233640 + 3.89 0.000 intron (NM_019114, intron 15 of 25) AluSx|SINE|Alu -66244 NM_014334 23732 Hs.347537 NM_014334 ENSG00000260230 FRRS1L C9orf4|CG-6|CG6|EIEE37 ferric chelate reductase 1 like protein-coding chr5-7059 chr5 170712673 170712883 + 3.89 0.000 intron (NM_001278340, intron 2 of 8) intron (NM_001278340, intron 2 of 8) -31308 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr13-3866 chr13 51098465 51098675 + 3.89 0.000 intron (NR_102432, intron 1 of 3) intron (NR_102432, intron 1 of 3) 12658 NM_001351589 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr12-5972 chr12 89906474 89906684 + 3.89 0.000 Intergenic Intergenic -41114 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA chr10-9175 chr10 130423641 130423851 + 3.89 0.000 Intergenic Intergenic 287337 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr16-3509 chr16 19138374 19138584 + 3.89 0.000 Intergenic AluSz|SINE|Alu 24515 NR_028028 162073 Hs.530899 NM_001034841 ENSG00000205730 ITPRIPL2 - ITPRIP like 2 protein-coding chr5-6712 chr5 67610258 67610468 + 3.89 0.000 Intergenic Intergenic 36426 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr13-4321 chr13 101231789 101231999 + 3.89 0.000 intron (NM_001350749, intron 12 of 43) intron (NM_001350749, intron 12 of 43) 184614 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chrX-3651 chrX 99957618 99957828 + 3.89 0.000 Intergenic Intergenic 452550 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr2-10847 chr2 59245558 59245768 + 3.89 0.000 intron (NR_110219, intron 1 of 2) MLT1I|LTR|ERVL-MaLR 27955 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr5-5697 chr5 164420753 164420963 + 3.89 0.000 Intergenic L1PREC2|LINE|L1 46544 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr14-5187 chr14 94433955 94434165 + 3.89 0.000 Intergenic Intergenic 18740 NM_001080451 256394 Hs.145890 NM_001080451 ENSG00000186910 SERPINA11 - serpin family A member 11 protein-coding chr1-8145 chr1 13376403 13376613 + 3.89 0.000 Intergenic AluSx4|SINE|Alu -4561 NM_001099790 645414 NM_001099790 ENSG00000204480 PRAMEF19 - PRAME family member 19 protein-coding chr1-13716 chr1 15224651 15224861 + 3.89 0.000 Intergenic Intergenic -22469 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr5-7339 chr5 17141492 17141702 + 3.89 0.000 intron (NR_027253, intron 2 of 2) AluSx3|SINE|Alu 14395 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr20-2923 chr20 64094871 64095081 + 3.89 0.000 intron (NM_001318855, intron 1 of 2) intron (NM_001318855, intron 1 of 2) 2288 NM_001318854 4987 Hs.2859 NM_000913 ENSG00000125510 OPRL1 KOR-3|NOCIR|NOP|NOPr|OOR|ORL1 opioid related nociceptin receptor 1 protein-coding chr4-7484 chr4 72083553 72083763 + 3.89 0.000 intron (NM_001144756, intron 2 of 4) L2|LINE|L2 44526 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr1-9038 chr1 12190391 12190601 + 3.89 0.000 intron (NM_001066, intron 2 of 9) intron (NM_001066, intron 2 of 9) -1217 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chrX-4088 chrX 23348288 23348498 + 3.89 0.000 intron (NM_173495, intron 1 of 2) L1MCa|LINE|L1 13544 NM_173495 139411 Hs.319503 NM_173495 ENSG00000165186 PTCHD1 AUTSX4 patched domain containing 1 protein-coding chr18-2689 chr18 58837828 58838038 + 3.89 0.000 Intergenic AluSx|SINE|Alu 24053 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr3-5240 chr3 101164679 101164889 + 3.89 0.000 Intergenic Intergenic 155791 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr8-2397 chr8 62914670 62914880 + 3.89 0.000 intron (NM_001304533, intron 4 of 6) intron (NM_001304533, intron 4 of 6) -63086 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr16-4175 chr16 9416022 9416232 + 3.89 0.000 Intergenic MIRb|SINE|MIR 28858 NR_126397 104355218 Hs.564967 NR_126397 ENSG00000261397 LINC01177 - long intergenic non-protein coding RNA 1177 ncRNA chr5-4741 chr5 50377124 50377334 + 3.89 0.000 Intergenic LTR12C|LTR|ERV1 64059 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chrX-5303 chrX 143022265 143022475 + 3.89 0.000 Intergenic MIRb|SINE|MIR -3558 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr4-8206 chr4 134957581 134957791 + 3.89 0.000 Intergenic Intergenic 165873 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr1-11281 chr1 7990360 7990570 + 3.89 0.000 Intergenic (CATCAC)n|Simple_repeat|Simple_repeat 28754 NM_007262 11315 Hs.419640 NM_007262 ENSG00000116288 PARK7 DJ-1|DJ1|GATD2|HEL-S-67p Parkinsonism associated deglycase protein-coding chr2-12970 chr2 104559891 104560101 + 3.89 0.000 Intergenic Intergenic -49487 NR_110113 101927360 Hs.650324 NR_110113 ENSG00000234781 LINC01103 - long intergenic non-protein coding RNA 1103 ncRNA chr3-8065 chr3 9118382 9118592 + 3.89 0.000 intron (NM_014850, intron 2 of 21) intron (NM_014850, intron 2 of 21) -74006 NR_121664 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr1-15646 chr1 163749417 163749627 + 3.89 0.000 Intergenic Intergenic -326331 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr16-5559 chr16 30716299 30716509 + 3.89 0.000 exon (NM_006662, exon 18 of 34) exon (NM_006662, exon 18 of 34) 5867 NR_002966 677813 Hs.689718 NR_002966 ENSG00000206755 SNORA30 ACA30|SNORA30A small nucleolar RNA, H/ACA box 30 snoRNA chr3-9153 chr3 32666470 32666680 + 3.89 0.000 Intergenic AluY|SINE|Alu -18613 NM_001256741 25904 Hs.444851 NM_015442 ENSG00000182973 CNOT10 - CCR4-NOT transcription complex subunit 10 protein-coding chr12-8337 chr12 131107088 131107298 + 3.89 0.000 intron (NM_198827, intron 17 of 24) intron (NM_198827, intron 17 of 24) -57818 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA chr2-12853 chr2 96470685 96470895 + 3.89 0.000 Intergenic Intergenic 34567 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr15-4792 chr15 71852320 71852530 + 3.89 0.000 intron (NM_006901, intron 35 of 41) AluSp|SINE|Alu 41871 NM_014249 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding chr13-3549 chr13 24389875 24390085 + 3.89 0.000 Intergenic Intergenic 58530 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr2-10190 chr2 96700334 96700544 + 3.89 0.000 exon (NM_001293083, exon 45 of 53) exon (NM_001293083, exon 45 of 53) 39637 NM_030805 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr5-9202 chr5 180437185 180437395 + 3.89 0.000 Intergenic Intergenic -57089 NR_163438 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding chr2-9734 chr2 70425857 70426067 + 3.89 0.000 Intergenic Intergenic 55678 NR_046798 100874273 Hs.682157 NR_046798 ENSG00000224606 TGFA-IT1 - TGFA intronic transcript 1 ncRNA chr8-6262 chr8 41567789 41567999 + 3.89 0.000 intron (NR_125824, intron 1 of 2) intron (NR_125824, intron 1 of 2) -10306 NM_001363198 137964 Hs.355753 NM_178819 ENSG00000158669 GPAT4 1-AGPAT 6|AGPAT6|LPAAT-zeta|LPAATZ|TSARG7 glycerol-3-phosphate acyltransferase 4 protein-coding chr4-8753 chr4 186457943 186458153 + 3.89 0.000 intron (NR_033901, intron 1 of 6) AluSg|SINE|Alu 43010 NR_033901 285441 Hs.481369 NR_033900 ENSG00000251165 F11-AS1 - F11 antisense RNA 1 ncRNA chr3-10399 chr3 129583497 129583707 + 3.89 0.000 exon (NM_015103, exon 8 of 36) exon (NM_015103, exon 8 of 36) 23137 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr2-11085 chr2 124949375 124949585 + 3.89 0.000 Intergenic MLT2D|LTR|ERVL 924193 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr17-8171 chr17 61384981 61385191 + 3.89 0.000 intron (NM_001330413, intron 25 of 25) intron (NM_001330413, intron 25 of 25) 14520 NR_125751 103689912 Hs.410998 NR_125749 ENSG00000267280 TBX2-AS1 - TBX2 antisense RNA 1 ncRNA chr1-12220 chr1 208483856 208484066 + 3.89 0.000 Intergenic L2c|LINE|L2 -239577 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr12-6485 chr12 103650353 103650563 + 3.89 0.000 intron (NM_017564, intron 10 of 68) intron (NM_017564, intron 10 of 68) 63185 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chr3-7957 chr3 166575953 166576163 + 3.89 0.000 Intergenic Intergenic -322625 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr3-8178 chr3 38771534 38771744 + 3.89 0.000 intron (NM_006514, intron 3 of 26) intron (NM_006514, intron 3 of 26) 22371 NM_001293307 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr12-5688 chr12 106518334 106518544 + 3.89 0.000 intron (NR_040246, intron 1 of 3) MIR|SINE|MIR -64468 NM_213594 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr1-12261 chr1 224482915 224483125 + 3.89 0.000 intron (NM_001322302, intron 2 of 6) L1M1|LINE|L1 48171 NR_136294 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr9-5407 chr9 94715392 94715602 + 3.89 0.000 Intergenic Intergenic -11172 NM_032823 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr3-10448 chr3 132830087 132830297 + 3.89 0.000 intron (NR_002811, intron 9 of 10) intron (NR_002811, intron 9 of 10) -107733 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr7-9608 chr7 149188584 149188794 + 3.89 0.000 Intergenic Intergenic -6857 NM_003575 8427 Hs.729056 NM_003575 ENSG00000170265 ZNF282 HUB1 zinc finger protein 282 protein-coding chr19-6996 chr19 49107713 49107923 + 3.89 0.000 exon (NM_003089, exon 10 of 10) exon (NM_003089, exon 10 of 10) -6552 NM_022165 64130 Hs.221737 NM_022165 ENSG00000104863 LIN7B LIN-7B|MALS-2|MALS2|VELI2 lin-7 homolog B, crumbs cell polarity complex component protein-coding chr2-12821 chr2 94653656 94653866 + 3.89 0.000 Intergenic Intergenic -66578 NR_024443 100133920 Hs.645503 NR_024443 ENSG00000261522 LOC100133920 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like pseudogene pseudo chr6-3492 chr6 15189270 15189480 + 3.89 0.000 Intergenic SVA_F|Retroposon|SVA -56694 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr4-7154 chr4 38734309 38734519 + 3.89 0.000 Intergenic Intergenic 48576 NM_030956 81793 Hs.120551 NM_030956 ENSG00000174123 TLR10 CD290 toll like receptor 10 protein-coding chr12-6030 chr12 109497720 109497930 + 3.89 0.000 exon (NM_183415, exon 10 of 28) exon (NM_183415, exon 10 of 28) 20191 NM_130466 89910 Hs.374067 NM_130466 ENSG00000151148 UBE3B BPIDS|KOS ubiquitin protein ligase E3B protein-coding chr10-6281 chr10 91191552 91191762 + 3.89 0.000 intron (NM_001257101, intron 1 of 9) intron (NM_001257101, intron 1 of 9) -28494 NM_001256549 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr4-7394 chr4 62712170 62712380 + 3.89 0.000 Intergenic Intergenic -550510 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr6-4744 chr6 69186071 69186281 + 3.89 0.000 intron (NM_001704, intron 17 of 31) intron (NM_001704, intron 17 of 31) 550894 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr2-14394 chr2 219751229 219751439 + 3.89 0.000 Intergenic SVA_B|Retroposon|SVA 123704 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr8-2192 chr8 132701114 132701324 + 3.89 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -25674 NR_135909 23639 Hs.591865 NM_012472 ENSG00000129295 LRRC6 CILD19|LRTP|TSLRP leucine rich repeat containing 6 protein-coding chr18-2765 chr18 801281 801491 + 3.89 0.000 intron (NM_005433, intron 1 of 11) L3|LINE|CR1 10856 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr3-7562 chr3 196856465 196856675 + 3.89 0.000 Intergenic L1MEf|LINE|L1 -11286 NM_001308045 205564 Hs.240770 NM_152699 ENSG00000119231 SENP5 - SUMO specific peptidase 5 protein-coding chr3-8315 chr3 64576945 64577155 + 3.89 0.000 intron (NM_001318781, intron 27 of 38) intron (NM_001318781, intron 27 of 38) 15704 NR_110150 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr2-13580 chr2 156687410 156687620 + 3.89 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 251136 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr2-10299 chr2 135301078 135301288 + 3.89 0.000 intron (NM_001286569, intron 8 of 21) AluSq|SINE|Alu 164555 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr2-8818 chr2 169498635 169498845 + 3.89 0.000 intron (NM_152384, intron 8 of 11) AluYc3|SINE|Alu -10962 NM_006063 10324 Hs.50550 NM_006063 ENSG00000239474 KLHL41 KBTBD10|Krp1|SARCOSIN kelch like family member 41 protein-coding chr5-6677 chr5 60884356 60884566 + 3.89 0.000 intron (NM_001007233, intron 12 of 12) AluYm1|SINE|Alu -40187 NM_001104558 79993 Hs.274256 NM_024930 ENSG00000164181 ELOVL7 - ELOVL fatty acid elongase 7 protein-coding chr19-5444 chr19 30267412 30267622 + 3.89 0.000 Intergenic Intergenic -104867 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr13-2659 chr13 81330506 81330716 + 3.89 0.000 Intergenic MER52C|LTR|ERV1 -103628 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr8-6483 chr8 62847380 62847590 + 3.89 0.000 intron (NM_001304533, intron 4 of 6) L1PA11|LINE|L1 -130376 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chr15-4390 chr15 42994381 42994591 + 3.89 0.000 intron (NM_174916, intron 33 of 46) intron (NM_174916, intron 33 of 46) -73708 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr11-10647 chr11 126517602 126517812 + 3.89 0.000 intron (NM_001301097, intron 4 of 15) intron (NM_001301097, intron 4 of 15) 111620 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr10-4315 chr10 19962860 19963070 + 3.89 0.000 intron (NM_032812, intron 1 of 13) AluYj4|SINE|Alu 146533 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chrX-1518 chrX 20686259 20686469 + 3.89 0.000 Intergenic AluSp|SINE|Alu -419455 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr18-2428 chr18 23007592 23007802 + 3.89 0.000 intron (NM_203292, intron 16 of 17) AluY|SINE|Alu 73821 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr6-7604 chr6 76533473 76533683 + 3.89 0.000 intron (NR_149101, intron 2 of 2) L1PREC2|LINE|L1 60045 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr2-11793 chr2 16206350 16206560 + 3.89 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 156028 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA chr8-3445 chr8 86856029 86856239 + 3.89 0.000 Intergenic Intergenic -10281 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr5-6425 chr5 154712785 154712995 + 3.89 0.000 promoter-TSS (NM_015315) promoter-TSS (NM_015315) 47 NM_015315 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr1-13243 chr1 219545825 219546035 + 3.89 0.000 intron (NR_135822, intron 1 of 3) SVA_D|Retroposon|SVA 11394 NR_135822 102723886 Hs.525963 NR_135822 LYPLAL1-AS1 - LYPLAL1 antisense RNA 1 ncRNA chr3-9276 chr3 41733213 41733423 + 3.89 0.000 intron (NR_136342, intron 21 of 34) Kanga2_a|DNA|TcMar-Tc2 228785 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr7-9075 chr7 104629345 104629555 + 3.89 0.000 intron (NM_199000, intron 1 of 2) MamRTE1|LINE|RTE-BovB 174642 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr2-13773 chr2 171627366 171627576 + 3.89 0.000 Intergenic MER52A|LTR|ERV1 -59998 NM_001271790 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding chr3-8295 chr3 58898082 58898292 + 3.89 0.000 intron (NR_147234, intron 5 of 10) AluSz|SINE|Alu 73716 NR_110820 101929238 Hs.683953 NR_110820 ENSG00000242428 C3orf67-AS1 - C3orf67 antisense RNA 1 ncRNA chr12-4537 chr12 25840900 25841110 + 3.89 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 33074 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr16-5206 chr16 17648645 17648855 + 3.89 0.000 Intergenic Intergenic -177790 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr22-3953 chr22 37647365 37647575 + 3.89 0.000 exon (NM_001350055, exon 13 of 18) exon (NM_001350055, exon 13 of 18) 7801 NM_018957 23616 Hs.601143 NM_018957 ENSG00000100092 SH3BP1 ARHGAP43 SH3 domain binding protein 1 protein-coding chr12-7419 chr12 58459183 58459393 + 3.89 0.000 Intergenic Intergenic -132414 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr2-14668 chr2 236403126 236403336 + 3.89 0.000 intron (NM_001270584, intron 7 of 17) intron (NM_001270584, intron 7 of 17) 100466 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr7-8063 chr7 23284566 23284776 + 3.89 0.000 Intergenic AluSx|SINE|Alu -14668 NM_138446 115416 Hs.87385 NM_138446 ENSG00000156928 MALSU1 C7orf30|mtRsfA mitochondrial assembly of ribosomal large subunit 1 protein-coding chr6-7390 chr6 50630001 50630211 + 3.89 0.000 Intergenic L1PA5|LINE|L1 -83438 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr19-5430 chr19 19178159 19178369 + 3.89 0.000 intron (NM_001145784, intron 5 of 5) intron (NM_001145784, intron 5 of 5) -8001 NM_001367282 100271849 Hs.153629 NM_001145785 ENSG00000213999 MEF2B RSRFR2 myocyte enhancer factor 2B protein-coding chr7-8728 chr7 76011594 76011804 + 3.89 0.000 intron (NM_001317787, intron 3 of 6) intron (NM_001317787, intron 3 of 6) -17104 NR_156695 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr10-8146 chr10 70594158 70594368 + 3.89 0.000 Intergenic Intergenic 8478 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr2-8598 chr2 139855988 139856198 + 3.89 0.000 Intergenic AluSc|SINE|Alu 730592 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr12-3979 chr12 16087750 16087960 + 3.89 0.000 Intergenic Intergenic 176523 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr22-3302 chr22 16937476 16937686 + 3.89 0.000 Intergenic HERVL-int|LTR|ERVL 70641 NM_001366857 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2 associated binding protein family member 4 protein-coding chr11-9984 chr11 78112705 78112915 + 3.89 0.000 intron (NM_001007027, intron 7 of 13) intron (NM_001007027, intron 7 of 13) 26816 NM_024079 79053 Hs.503368 NM_024079 ENSG00000159063 ALG8 CDG1H|PCLD3 ALG8 alpha-1,3-glucosyltransferase protein-coding chr5-4678 chr5 38086017 38086227 + 3.89 0.000 intron (NR_147009, intron 2 of 2) LTR106_Mam|LTR|LTR 60425 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr7-6609 chr7 100911044 100911254 + 3.89 0.000 Intergenic AluSz|SINE|Alu -14155 NM_001367919 43 Hs.154495 NM_000665 ENSG00000087085 ACHE ACEE|ARACHE|N-ACHE|YT acetylcholinesterase (Cartwright blood group) protein-coding chr3-7039 chr3 172947482 172947692 + 3.89 0.000 intron (NM_031955, intron 6 of 10) L1PA8|LINE|L1 193648 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chr8-6789 chr8 94985642 94985852 + 3.89 0.000 intron (NM_001354522, intron 3 of 11) AluSg|SINE|Alu 36187 NR_148907 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr2-11678 chr2 7779001 7779211 + 3.89 0.000 Intergenic AluSx|SINE|Alu 120549 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr7-6285 chr7 138160634 138160844 + 3.89 0.000 Intergenic AluSc|SINE|Alu 36981 NR_039678 100616226 NR_039678 ENSG00000284028 MIR4468 - microRNA 4468 ncRNA chr7-4818 chr7 98894665 98894875 + 3.89 0.000 intron (NM_003496, intron 6 of 70) AluSx|SINE|Alu 13073 NR_132754 106633801 NR_132754 SCARNA28 ZL1 small Cajal body-specific RNA 28 ncRNA chr11-5932 chr11 15231182 15231392 + 3.89 0.000 intron (NM_001042536, intron 9 of 12) intron (NM_001042536, intron 9 of 12) 82185 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr8-5151 chr8 80232716 80232926 + 3.89 0.000 Intergenic LTR12C|LTR|ERV1 -8568 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA chr8-5449 chr8 41062368 41062578 + 3.89 0.000 Intergenic MER1A|DNA|hAT-Charlie -164647 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr1-15634 chr1 162800416 162800626 + 3.89 0.000 intron (NM_016371, intron 5 of 8) intron (NM_016371, intron 5 of 8) 9819 NM_016371 51478 Hs.492925 NM_016371 ENSG00000132196 HSD17B7 PRAP|SDR37C1 hydroxysteroid 17-beta dehydrogenase 7 protein-coding chr4-4189 chr4 10971522 10971732 + 3.89 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -286859 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr11-10274 chr11 103337765 103337975 + 3.89 0.000 intron (NM_001377, intron 82 of 88) L1MA4|LINE|L1 228444 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr5-6611 chr5 37322652 37322862 + 3.89 0.000 intron (NM_001278312, intron 20 of 33) AluSq2|SINE|Alu 48349 NM_001278312 9631 Hs.547696 NM_004298 ENSG00000113569 NUP155 ATFB15|N155 nucleoporin 155 protein-coding chr20-3332 chr20 23476354 23476564 + 3.89 0.000 Intergenic Intergenic -14658 NM_005492 10047 Hs.121602 NM_005492 ENSG00000125815 CST8 CRES|CTES5 cystatin 8 protein-coding chr7-7618 chr7 133131646 133131856 + 3.89 0.000 Intergenic L2a|LINE|L2 -23240 NR_133931 105375512 Hs.521205 NR_133931 LOC105375512 - uncharacterized LOC105375512 ncRNA chr9-6721 chr9 7237554 7237764 + 3.89 0.000 Intergenic LTR40a|LTR|ERVL 480309 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr15-4899 chr15 77002941 77003151 + 3.89 0.000 intron (NR_135552, intron 1 of 11) intron (NR_135552, intron 1 of 11) 7920 NM_001321136 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chr10-8953 chr10 118272386 118272596 + 3.89 0.000 Intergenic Intergenic 69833 NM_001134672 63877 Hs.105575 NM_022063 ENSG00000165669 FAM204A C10orf84|bA319I23.1 family with sequence similarity 204 member A protein-coding chr2-11827 chr2 18684399 18684609 + 3.89 0.000 Intergenic Intergenic -94924 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr7-4894 chr7 123245523 123245733 + 3.89 0.000 Intergenic MIR|SINE|MIR -45657 NM_001324400 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr15-4141 chr15 85673446 85673656 + 3.89 0.000 intron (NM_007200, intron 14 of 36) intron (NM_007200, intron 14 of 36) 53601 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr2-8410 chr2 116476247 116476457 + 3.89 0.000 Intergenic Intergenic 1132537 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr1-10916 chr1 209267419 209267629 + 3.89 0.000 Intergenic L3|LINE|CR1 -57932 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr2-10971 chr2 94880486 94880696 + 3.89 0.000 intron (NR_037597, intron 8 of 9) intron (NR_037597, intron 8 of 9) 9161 NM_001286559 150483 Hs.631517 NM_144705 ENSG00000163060 TEKT4 - tektin 4 protein-coding chr8-3942 chr8 46423900 46424110 + 3.89 0.000 Intergenic GSAT|Satellite|centr 193638 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr3-9239 chr3 38557482 38557692 + 3.89 0.000 intron (NM_198056, intron 23 of 27) intron (NM_198056, intron 23 of 27) 61247 NR_134938 9941 Hs.517897 NM_005107 ENSG00000157036 EXOG ENDOGL1|ENDOGL2|ENGL|ENGL-a|ENGL-b|ENGLA|ENGLB exo/endonuclease G protein-coding chr8-5103 chr8 58623842 58624052 + 3.89 0.000 intron (NM_001144772, intron 6 of 30) L1M4|LINE|L1 35460 NM_001144772 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr22-3532 chr22 11574820 11575030 + 3.89 0.000 Intergenic Intergenic -322481 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr5-7024 chr5 158907488 158907698 + 3.89 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 190363 NM_001364156 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr1-16468 chr1 228194653 228194863 + 3.89 0.000 Intergenic Intergenic -13286 NM_052843 84033 Hs.650039 NM_052843 ENSG00000154358 OBSCN ARHGEF30|UNC89 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF protein-coding chr2-12375 chr2 52721776 52721986 + 3.89 0.000 Intergenic Intergenic -19266 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chrX-4937 chrX 110999498 110999708 + 3.89 0.000 intron (NM_001128167, intron 1 of 14) intron (NM_001128167, intron 1 of 14) 55206 NM_001324330 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr1-14961 chr1 88440481 88440691 + 3.89 0.000 Intergenic L1MC5|LINE|L1 -243558 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1-16070 chr1 202329239 202329449 + 3.89 0.000 Intergenic Intergenic 12592 NM_014176 29089 Hs.5199 NM_014176 ENSG00000077152 UBE2T FANCT|HSPC150|PIG50 ubiquitin conjugating enzyme E2 T protein-coding chr2-4896 chr2 130213741 130213951 + 3.89 0.000 Intergenic AluSp|SINE|Alu -15407 NM_207312 112714 Hs.433336 NM_207312 ENSG00000152086 TUBA3E - tubulin alpha 3e protein-coding chr7-7926 chr7 8245813 8246023 + 3.89 0.000 intron (NM_001350826, intron 1 of 14) Tigger12|DNA|TcMar-Tigger 16134 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr9-7860 chr9 85727626 85727836 + 3.89 0.000 intron (NM_015239, intron 1 of 25) Charlie6|DNA|hAT-Charlie 14298 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr2-13925 chr2 183138866 183139076 + 3.89 0.000 intron (NR_109856, intron 4 of 7) intron (NR_109856, intron 4 of 7) 14528 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr1-15865 chr1 181864439 181864649 + 3.89 0.000 Intergenic MSTB|LTR|ERVL-MaLR 197168 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr3-4735 chr3 71754172 71754382 + 3.89 0.000 promoter-TSS (NM_001282886) promoter-TSS (NM_001282886) 106 NM_001134649 317649 Hs.581355 NM_173359 ENSG00000163412 EIF4E3 eIF-4E3|eIF4E-3 eukaryotic translation initiation factor 4E family member 3 protein-coding chrX-2836 chrX 137737342 137737552 + 3.89 0.000 Intergenic MSTB|LTR|ERVL-MaLR 171320 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr16-5144 chr16 1604143 1604353 + 3.89 0.000 intron (NM_014714, intron 3 of 30) intron (NM_014714, intron 3 of 30) 7824 NM_014714 9742 Hs.389438 NM_014714 ENSG00000187535 IFT140 MZSDS|RP80|SRTD9|WDTC2|c305C8.4|c380F5.1|gs114 intraflagellar transport 140 protein-coding chr2-11026 chr2 108667441 108667651 + 3.89 0.000 intron (NM_001193484, intron 2 of 9) Charlie2a|DNA|hAT-Charlie 11055 NR_149074 106182118 Hs.613268 NR_149074 ENSG00000228763 LIMS1-AS1 - LIMS1 antisense RNA 1 ncRNA chr10-7586 chr10 18877322 18877532 + 3.89 0.000 Intergenic AluJb|SINE|Alu -171374 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr4-2893 chr4 79856293 79856503 + 3.89 0.000 intron (NR_026555, intron 1 of 1) MLT1G|LTR|ERVL-MaLR 28927 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr18-2483 chr18 49238672 49238882 + 3.89 0.000 intron (NM_001353214, intron 13 of 17) AluSx3|SINE|Alu -189009 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr5-6066 chr5 2199711 2199921 + 3.89 0.000 Intergenic Intergenic 112385 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr22-3120 chr22 19743487 19743697 + 3.89 0.000 Intergenic Intergenic -13111 NM_080647 6899 Hs.173984 NM_005992 ENSG00000184058 TBX1 CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS T-box transcription factor 1 protein-coding chr12-5908 chr12 63950316 63950526 + 3.89 0.000 intron (NM_001346201, intron 1 of 21) intron (NM_001346201, intron 1 of 21) 105721 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr4-6484 chr4 152095327 152095537 + 3.89 0.000 Intergenic Intergenic -5321 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr1-13545 chr1 6975709 6975919 + 3.89 0.000 intron (NM_001349608, intron 2 of 21) L1MB8|LINE|L1 190360 NM_001349609 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr7-7443 chr7 82727332 82727542 + 3.89 0.000 Intergenic AluY|SINE|Alu -283481 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr20-2422 chr20 23389162 23389372 + 3.89 0.000 intron (NM_001283026, intron 6 of 9) L1MB7|LINE|L1 24904 NM_001317019 64412 Hs.709462 NM_022482 ENSG00000125812 GZF1 JLSM|ZBTB23|ZNF336 GDNF inducible zinc finger protein 1 protein-coding chr5-7713 chr5 58449226 58449436 + 3.89 0.000 Intergenic AluJr|SINE|Alu 10755 NM_006622 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding chr11-10201 chr11 96162112 96162322 + 3.89 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -179221 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr9-6542 chr9 114544360 114544570 + 3.89 0.000 Intergenic Intergenic -38992 NM_001173425 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr19-6221 chr19 6121489 6121699 + 3.89 0.000 Intergenic AluJr|SINE|Alu -11094 NM_000635 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr9-5792 chr9 128540993 128541203 + 3.89 0.000 intron (NM_001003722, intron 15 of 15) intron (NM_001003722, intron 15 of 15) -11489 NM_001195532 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr13-2539 chr13 62633992 62634202 + 3.89 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 162595 NR_047029 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA chr18-2513 chr18 65708026 65708236 + 3.89 0.000 Intergenic L1MA6|LINE|L1 -42121 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr1-16259 chr1 211860300 211860510 + 3.89 0.000 Intergenic Intergenic 29444 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chrX-3013 chrX 56448110 56448320 + 3.89 0.000 Intergenic Intergenic -115378 NM_013444 29978 Hs.179309 NM_013444 ENSG00000188021 UBQLN2 ALS15|CHAP1|DSK2|HRIHFB2157|N4BP4|PLIC2 ubiquilin 2 protein-coding chr2-14492 chr2 226771141 226771351 + 3.89 0.000 intron (NM_005544, intron 1 of 1) intron (NM_005544, intron 1 of 1) 27544 NM_005544 3667 Hs.471508 NM_005544 ENSG00000169047 IRS1 HIRS-1 insulin receptor substrate 1 protein-coding chr11-10103 chr11 86670189 86670399 + 3.89 0.000 intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 1904 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr14-3968 chr14 25275967 25276177 + 3.89 0.000 Intergenic Intergenic -225775 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr7-7046 chr7 139833388 139833598 + 3.89 0.000 intron (NM_001366537, intron 1 of 11) AluSx3|SINE|Alu 4229 NM_001166253 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr13-3865 chr13 51089788 51089998 + 3.89 0.000 intron (NR_102432, intron 1 of 3) HAL1|LINE|L1 21335 NM_001351589 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr3-8171 chr3 37164631 37164841 + 3.77 0.000 intron (NM_001348298, intron 2 of 21) AluSx1|SINE|Alu 9846 NM_006309 9209 Hs.740522 NM_006309 ENSG00000093167 LRRFIP2 HUFI-2 LRR binding FLII interacting protein 2 protein-coding chr11-7986 chr11 11036935 11037145 + 3.77 0.000 Intergenic Intergenic 178823 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr19-6305 chr19 8657540 8657750 + 3.77 0.000 Intergenic Intergenic 41150 NM_178525 284382 Hs.209206 NM_178525 ENSG00000181786 ACTL9 HSD21 actin like 9 protein-coding chr9-7446 chr9 26493214 26493424 + 3.77 0.000 Intergenic SVA_B|Retroposon|SVA 399483 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr18-3107 chr18 36179281 36179491 + 3.77 0.000 TTS (NR_134605) TTS (NR_134605) 8049 NR_134605 101927809 Hs.600673 NR_134605 ENSG00000260552 LOC101927809 - uncharacterized LOC101927809 ncRNA chr17-7213 chr17 726627 726837 + 3.77 0.000 Intergenic MIRc|SINE|MIR -5814 NM_001318007 79850 Hs.154396 NM_024792 ENSG00000167695 TLCD3A CT120|FAM57A TLC domain containing 3A protein-coding chr7-8344 chr7 43137244 43137454 + 3.77 0.000 intron (NR_135295, intron 3 of 6) intron (NR_135295, intron 3 of 6) -13546 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr17-7438 chr17 11768069 11768279 + 3.77 0.000 intron (NM_001372, intron 36 of 68) intron (NM_001372, intron 36 of 68) -114728 NM_004662 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chrY-29 chrY 10647957 10648167 + 3.77 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat 737264 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 ncRNA chr7-4391 chr7 88266214 88266424 + 3.77 0.000 Intergenic SVA_C|Retroposon|SVA -39326 NM_001256892 6717 Hs.489040 NM_003130 ENSG00000075142 SRI CP-22|CP22|SCN|V19 sorcin protein-coding chr15-1796 chr15 89296776 89296986 + 3.77 0.000 intron (NM_001113378, intron 24 of 37) SVA_A|Retroposon|SVA 29929 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr7-9623 chr7 150204559 150204769 + 3.77 0.000 intron (NM_001351028, intron 6 of 9) LTR78|LTR|ERV1 16436 NR_147017 653857 Hs.664579 NM_001164458 ENSG00000106526 ACTR3C ARP11 actin related protein 3C protein-coding chr20-2935 chr20 2998152 2998362 + 3.77 0.000 intron (NM_080841, intron 8 of 22) intron (NM_080841, intron 8 of 22) -45365 NM_001310220 2797 Hs.129715 NM_001501 ENSG00000125787 GNRH2 GnRH-II|LH-RHII gonadotropin releasing hormone 2 protein-coding chr18-3584 chr18 80158848 80159058 + 3.77 0.000 3' UTR (NM_032510, exon 3 of 3) 3' UTR (NM_032510, exon 3 of 3) 11029 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr5-8281 chr5 113201798 113202008 + 3.77 0.000 intron (NM_001085377, intron 3 of 18) intron (NM_001085377, intron 3 of 18) 93035 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr18-3142 chr18 40520817 40521027 + 3.77 0.000 Intergenic L2a|LINE|L2 454636 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr9-7279 chr9 7232020 7232230 + 3.77 0.000 Intergenic Intergenic 474775 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr20-1948 chr20 25561961 25562171 + 3.77 0.000 intron (NM_025176, intron 1 of 23) SVA_D|Retroposon|SVA 23465 NM_025176 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr4-7016 chr4 24815853 24816063 + 3.77 0.000 intron (NM_001130726, intron 11 of 11) intron (NM_001130726, intron 11 of 11) 20385 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr1-14360 chr1 42210016 42210226 + 3.77 0.000 intron (NM_001198850, intron 5 of 12) L1PBb|LINE|L1 -45376 NM_033553 2980 Hs.778 NM_033553 ENSG00000197273 GUCA2A GCAP-I|GUCA2|STARA guanylate cyclase activator 2A protein-coding chr9-8592 chr9 128137711 128137921 + 3.77 0.000 Intergenic Intergenic 9287 NR_024425 389791 Hs.632678 NM_001013652 ENSG00000232850 PTGES2-AS1 - PTGES2 antisense RNA 1 (head to head) ncRNA chr10-7928 chr10 51724788 51724998 + 3.77 0.000 intron (NM_001098512, intron 3 of 17) AluJb|SINE|Alu -25298 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr2-10978 chr2 96377846 96378056 + 3.77 0.000 TTS (NM_001281710) TTS (NM_001281710) 42185 NM_015341 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr15-2391 chr15 59639373 59639583 + 3.77 0.000 intron (NM_001320930, intron 5 of 5) AluYe5|SINE|Alu 17827 NM_001320929 2958 Hs.512934 NM_004492 ENSG00000140307 GTF2A2 HsT18745|T18745|TF2A2|TFIIA|TFIIA-12|TFIIA-gamma|TFIIAS general transcription factor IIA subunit 2 protein-coding chrX-5188 chrX 133862566 133862776 + 3.77 0.000 intron (NM_001164619, intron 1 of 6) AluSx3|SINE|Alu -34772 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chrX-3303 chrX 114670260 114670470 + 3.77 0.000 intron (NM_001256761, intron 2 of 5) AluSx1|SINE|Alu 17710 NR_031563 100302251 NR_031563 ENSG00000276158 MIR1264 MIRN1264|hsa-mir-1264 microRNA 1264 ncRNA chr13-3742 chr13 41802343 41802553 + 3.77 0.000 intron (NM_001009814, intron 17 of 25) L1M1|LINE|L1 158637 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr8-4803 chr8 4905737 4905947 + 3.77 0.000 intron (NM_033225, intron 1 of 69) AluY|SINE|Alu 89072 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr5-7181 chr5 5838840 5839050 + 3.77 0.000 Intergenic Intergenic 416268 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr2-10455 chr2 214585552 214585762 + 3.77 0.000 Intergenic Intergenic 75475 NR_047698 100885780 Hs.665982 NR_047698 ENSG00000224257 VWC2L-IT1 - VWC2L intronic transcript 1 ncRNA chr7-7388 chr7 68468295 68468505 + 3.77 0.000 Intergenic AluJr4|SINE|Alu 448147 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr3-9935 chr3 88944069 88944279 + 3.77 0.000 Intergenic Intergenic -163447 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr6-6811 chr6 6725767 6725977 + 3.77 0.000 Intergenic Intergenic -103046 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr16-6039 chr16 10220153 10220363 + 3.77 0.000 Intergenic MIRb|SINE|MIR -37350 NM_000833 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr12-7438 chr12 61490758 61490968 + 3.77 0.000 Intergenic Intergenic 701976 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chrX-4377 chrX 50481870 50482080 + 3.77 0.000 Intergenic AluSx3|SINE|Alu -11150 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr3-9081 chr3 27500051 27500261 + 3.77 0.000 Intergenic Intergenic -15772 NM_001321104 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr7-8206 chr7 31974243 31974453 + 3.77 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 96059 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr6-6539 chr6 131532711 131532921 + 3.77 0.000 Intergenic Intergenic -40410 NM_001244438 383 Hs.440934 NM_000045 ENSG00000118520 ARG1 - arginase 1 protein-coding chr1-6222 chr1 217454489 217454699 + 3.77 0.000 intron (NM_018040, intron 8 of 9) AluY|SINE|Alu 176496 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr4-4084 chr4 4327663 4327873 + 3.77 0.000 Intergenic Intergenic 37517 NR_138481 166793 Hs.419997 NM_145291 ENSG00000168826 ZBTB49 ZNF509 zinc finger and BTB domain containing 49 protein-coding chr13-2771 chr13 99391142 99391352 + 3.77 0.000 Intergenic Intergenic 35116 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr8-6242 chr8 39457186 39457396 + 3.77 0.000 intron (NR_073423, intron 19 of 21) intron (NR_073423, intron 19 of 21) 65698 NR_024106 1587 Hs.98848 NR_001569 ENSG00000197475 ADAM3A ADAM3|CYRN1|tMDCI ADAM metallopeptidase domain 3A (pseudogene) pseudo chr6-3507 chr6 25156329 25156539 + 3.77 0.000 Intergenic Intergenic -18042 NR_027626 8418 Hs.484918 NR_002174 ENSG00000168405 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo chr20-4073 chr20 38661967 38662177 + 3.77 0.000 Intergenic L1PA16|LINE|L1 60263 NM_001164431 343578 NM_001164431 ENSG00000124143 ARHGAP40 C20orf95|dJ1100H13.4 Rho GTPase activating protein 40 protein-coding chr17-7409 chr17 9108152 9108362 + 3.77 0.000 intron (NM_004822, intron 2 of 6) LTR67B|LTR|ERVL 70861 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr12-7775 chr12 96053602 96053812 + 3.77 0.000 Intergenic Intergenic -10187 NM_001256643 4048 Hs.524648 NM_000895 ENSG00000111144 LTA4H - leukotriene A4 hydrolase protein-coding chrX-4785 chrX 98006796 98007006 + 3.77 0.000 Intergenic Intergenic -442366 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr12-5331 chr12 114584520 114584730 + 3.77 0.000 Intergenic L1MC5|LINE|L1 99550 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr6-5231 chr6 135517445 135517655 + 3.77 0.000 intron (NR_152842, intron 2 of 5) L1PA14|LINE|L1 19749 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr6-2592 chr6 89471828 89472038 + 3.77 0.000 intron (NM_001242809, intron 1 of 15) AluSq2|SINE|Alu 38755 NM_014942 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr18-2434 chr18 24801043 24801253 + 3.77 0.000 Intergenic Intergenic 75367 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chr5-8998 chr5 164842642 164842852 + 3.77 0.000 Intergenic L2a|LINE|L2 372468 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr15-3902 chr15 25277104 25277314 + 3.77 0.000 intron (NR_146177, intron 144 of 147) intron (NR_146177, intron 144 of 147) -1134 NR_001295 338428 NR_001295 ENSG00000274640 SNORD109A HBII-438A small nucleolar RNA, C/D box 109A snoRNA chr17-8285 chr17 68496675 68496885 + 3.77 0.000 intron (NM_001278433, intron 1 of 10) MER58B|DNA|hAT-Charlie -15000 NM_212471 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr18-2506 chr18 61503726 61503936 + 3.77 0.000 intron (NM_031891, intron 5 of 11) L2b|LINE|L2 170401 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr6-6926 chr6 14721924 14722134 + 3.77 0.000 Intergenic AluJo|SINE|Alu -436575 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr17-6428 chr17 5262254 5262464 + 3.77 0.000 Intergenic AluJo|SINE|Alu -19925 NM_001291582 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr13-4352 chr13 103412628 103412838 + 3.77 0.000 Intergenic L2a|LINE|L2 -12467 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr12-5789 chr12 12911397 12911607 + 3.77 0.000 intron (NM_003979, intron 2 of 3) AluY|SINE|Alu -4327 NR_030345 693199 NR_030345 ENSG00000283759 MIR614 MIRN614|hsa-mir-614 microRNA 614 ncRNA chr15-4419 chr15 44616210 44616420 + 3.77 0.000 intron (NM_025137, intron 15 of 39) AluJo|SINE|Alu 47347 NM_001160227 80208 Hs.656271 NM_025137 ENSG00000104133 SPG11 ALS5|CMT2X|KIAA1840 SPG11 vesicle trafficking associated, spatacsin protein-coding chr3-10917 chr3 172722884 172723094 + 3.77 0.000 Intergenic HERV17-int|LTR|ERV1 -11922 NM_001146277 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr12-5583 chr12 28190353 28190563 + 3.77 0.000 promoter-TSS (NM_001352078) promoter-TSS (NM_001352078) 2 NM_001352078 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding chr3-11206 chr3 194016976 194017186 + 3.77 0.000 intron (NR_136179, intron 1 of 2) intron (NR_136179, intron 1 of 2) -13422 NR_033944 647323 Hs.652830 NR_033944 ENSG00000214146 LINC02026 - long intergenic non-protein coding RNA 2026 ncRNA chr13-3800 chr13 45776780 45776990 + 3.77 0.000 TTS (NM_198849) TTS (NM_198849) 74416 NM_001286342 220082 Hs.186363 NM_152719 ENSG00000174015 SPERT CBY2|NURIT spermatid associated protein-coding chr22-3861 chr22 33118414 33118624 + 3.77 0.000 Intergenic AluJb|SINE|Alu 9990 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA chr3-4494 chr3 57629404 57629614 + 3.77 0.000 intron (NM_152678, intron 18 of 19) AluY|SINE|Alu 31720 NR_132369 106144532 Hs.667207 NR_132369 ENSG00000272146 ARF4-AS1 - ARF4 antisense RNA 1 ncRNA chr5-6594 chr5 31606782 31606992 + 3.77 0.000 Intergenic MER3|DNA|hAT-Charlie -32244 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr19-6242 chr19 6496885 6497095 + 3.77 0.000 intron (NM_006087, intron 3 of 3) AluJo|SINE|Alu 5319 NM_006087 10382 Hs.110837 NM_006087 ENSG00000104833 TUBB4A DYT4|TUBB4|beta-5 tubulin beta 4A class IVa protein-coding chr5-7814 chr5 66475354 66475564 + 3.77 0.000 Intergenic Intergenic 36145 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr2-11941 chr2 25610546 25610756 + 3.77 0.000 intron (NM_033147, intron 4 of 19) L1ME3A|LINE|L1 39571 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr2-13350 chr2 135194782 135194992 + 3.77 0.000 Intergenic Intergenic 58259 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr4-8777 chr4 189131081 189131291 + 3.77 0.000 Intergenic LFSINE_Vert|SINE|tRNA 354529 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr10-7098 chr10 95290592 95290802 + 3.77 0.000 intron (NM_020992, intron 1 of 6) CpG 306 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr19-5353 chr19 5193296 5193506 + 3.77 0.000 Intergenic Intergenic 147411 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr20-4349 chr20 55234191 55234401 + 3.77 0.000 Intergenic L1MA9|LINE|L1 -188747 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA chr15-2821 chr15 39028156 39028366 + 3.77 0.000 Intergenic Intergenic -222408 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr1-15651 chr1 164239557 164239767 + 3.77 0.000 Intergenic Intergenic -319698 NM_001353131 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr11-9443 chr11 61116654 61116864 + 3.77 0.000 intron (NM_001346456, intron 2 of 10) (AC)n|Simple_repeat|Simple_repeat 14270 NM_014207 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr4-5976 chr4 177706173 177706383 + 3.77 0.000 Intergenic AluJb|SINE|Alu -22479 NR_028342 285501 Hs.722466 NM_001085490 ENSG00000231171 LINC01098 - long intergenic non-protein coding RNA 1098 ncRNA chr1-16335 chr1 218004168 218004378 + 3.77 0.000 Intergenic L1M5|LINE|L1 -39232 NR_110794 101929631 Hs.407614 NR_110794 ENSG00000232100 LINC01653 - long intergenic non-protein coding RNA 1653 ncRNA chr6-6992 chr6 20257765 20257975 + 3.77 0.000 Intergenic AluSx|SINE|Alu -45401 NR_073465 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr12-7171 chr12 49075367 49075577 + 3.77 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -5493 NR_130123 121268 Hs.159013 NM_144593 ENSG00000167550 RHEBL1 RHEBL1c RHEB like 1 protein-coding chr1-12130 chr1 169469136 169469346 + 3.77 0.000 intron (NM_006996, intron 3 of 5) intron (NM_006996, intron 3 of 5) -8572 NM_001300968 57821 Hs.567557 NM_021179 ENSG00000117477 CCDC181 C1orf114 coiled-coil domain containing 181 protein-coding chr10-7936 chr10 52607178 52607388 + 3.77 0.000 intron (NR_155748, intron 1 of 2) intron (NR_155748, intron 1 of 2) -136750 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LNCAROD A-ROD|LINC01468|lnc-MBL2-4 lncRNA activating regulator of DKK1 ncRNA chr8-4261 chr8 93496859 93497069 + 3.77 0.000 intron (NR_033858, intron 7 of 10) AluSx|SINE|Alu 203469 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr2-10207 chr2 101435659 101435869 + 3.77 0.000 intron (NM_001367509, intron 4 of 13) intron (NM_001367509, intron 4 of 13) 39348 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr18-2966 chr18 22360920 22361130 + 3.77 0.000 Intergenic Intergenic 56890 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T cell lymphoma-associated antigen 1 protein-coding chr6-8128 chr6 128799499 128799709 + 3.77 0.000 Intergenic L1MEc|LINE|L1 -83534 NM_001079823 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr17-5362 chr17 30643228 30643438 + 3.77 0.000 Intergenic AluSx1|SINE|Alu 19015 NR_033420 6459 Hs.684860 NR_033420 SH3GL1P2 CNSA-P2|SH3GLP2 SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 2 pseudo chr16-6168 chr16 24370141 24370351 + 3.77 0.000 Intergenic Intergenic 114693 NM_006539 10368 Hs.7235 NM_006539 ENSG00000006116 CACNG3 - calcium voltage-gated channel auxiliary subunit gamma 3 protein-coding chr22-3548 chr22 16960669 16960879 + 3.77 0.000 Intergenic L2b|LINE|L2 47448 NM_001366857 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2 associated binding protein family member 4 protein-coding chr3-8375 chr3 88484390 88484600 + 3.77 0.000 Intergenic L1MC4a|LINE|L1 146039 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr8-5323 chr8 144627899 144628109 + 3.77 0.000 intron (NM_001308208, intron 1 of 10) intron (NM_001308208, intron 1 of 10) -14501 NM_001308207 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr2-12467 chr2 60581884 60582094 + 3.77 0.000 Intergenic CpG -28335 NM_022893 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr9-7662 chr9 68992746 68992956 + 3.77 0.000 intron (NM_003558, intron 15 of 15) AluSz|SINE|Alu -17010 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chr12-6262 chr12 43695662 43695872 + 3.77 0.000 Intergenic Intergenic 63023 NM_001098614 83448 Hs.23554 NM_031292 ENSG00000129317 PUS7L - pseudouridine synthase 7 like protein-coding chr2-14648 chr2 235427966 235428176 + 3.77 0.000 Intergenic Intergenic -65972 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr1-11612 chr1 229939041 229939251 + 3.77 0.000 Intergenic MER103C|DNA|hAT-Charlie -45238 NR_146475 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chrX-4221 chrX 37992312 37992522 + 3.77 0.000 Intergenic MIRb|SINE|MIR 1638 NM_012274 25763 Hs.122959 NM_012274 ENSG00000187516 HYPM CXorf27|HIP17 huntingtin interacting protein M protein-coding chr15-4578 chr15 59319663 59319873 + 3.77 0.000 intron (NM_004998, intron 1 of 27) AluSp|SINE|Alu 53103 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr6-5953 chr6 79144805 79145015 + 3.77 0.000 Intergenic L2c|LINE|L2 -66656 NM_017934 55023 Hs.511817 NM_017934 ENSG00000146247 PHIP BRWD2|DCAF14|DIDOD|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding chrX-4400 chrX 52662921 52663131 + 3.77 0.000 Intergenic L1MEh|LINE|L1 -8126 NM_173358 280658 Hs.558712 NM_173358 ENSG00000187754 SSX7 - SSX family member 7 protein-coding chr1-12608 chr1 36632567 36632777 + 3.77 0.000 Intergenic L1ME4b|LINE|L1 -149358 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr6-7030 chr6 24463498 24463708 + 3.77 0.000 intron (NM_001503, intron 10 of 24) intron (NM_001503, intron 10 of 24) 25975 NM_001503 2822 Hs.533291 NM_001503 ENSG00000112293 GPLD1 GPIPLD|GPIPLDM|PIGPLD|PIGPLD1|PLD glycosylphosphatidylinositol specific phospholipase D1 protein-coding chr14-5317 chr14 101830278 101830488 + 3.77 0.000 intron (NM_001161725, intron 3 of 15) intron (NM_001161725, intron 3 of 15) 20520 NM_001352912 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr2-14238 chr2 211659759 211659969 + 3.77 0.000 intron (NM_001042599, intron 15 of 26) L2c|LINE|L2 766496 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr20-3536 chr20 1044309 1044519 + 3.77 0.000 Intergenic Intergenic -42103 NM_001040007 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding chr12-7666 chr12 84150325 84150535 + 3.77 0.000 Intergenic AluJo|SINE|Alu 762369 NM_182767 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr2-6452 chr2 158269679 158269889 + 3.77 0.000 intron (NM_138803, intron 9 of 13) LTR16E2|LTR|ERVL 103134 NR_038850 554201 Hs.570262 NR_038850 ENSG00000227480 CCDC148-AS1 - CCDC148 antisense RNA 1 ncRNA chr3-11226 chr3 195219477 195219687 + 3.77 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 28338 NM_001308069 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr5-8967 chr5 160717948 160718158 + 3.77 0.000 intron (NM_001366652, intron 2 of 24) intron (NM_001366652, intron 2 of 24) -32662 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr1-16722 chr1 248031257 248031467 + 3.77 0.000 intron (NM_001304535, intron 1 of 1) LTR36|LTR|ERV1 -6810 NM_001004686 26246 Hs.684888 NM_001004686 ENSG00000203663 OR2L2 HSHTPCRH07|HTPCRH07|OR1-48|OR2L12|OR2L4P olfactory receptor family 2 subfamily L member 2 protein-coding chr9-8359 chr9 117376549 117376759 + 3.77 0.000 intron (NM_014010, intron 1 of 21) MIRb|SINE|MIR 38403 NM_001365068 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr2-9713 chr2 58869632 58869842 + 3.77 0.000 intron (NR_033873, intron 3 of 13) L2b|LINE|L2 -347971 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr2-13017 chr2 107933963 107934173 + 3.77 0.000 Intergenic Intergenic -52456 NM_021815 60482 Hs.287758 NM_021815 ENSG00000115665 SLC5A7 CHT|CHT1|CMS20|HMN7A solute carrier family 5 member 7 protein-coding chrX-3230 chrX 65593083 65593293 + 3.77 0.000 Intergenic Intergenic -40767 NR_033742 83957 Hs.652967 NR_033742 ENSG00000227942 FRMD8P1 - FERM domain containing 8 pseudogene 1 pseudo chr4-7925 chr4 108108407 108108617 + 3.77 0.000 intron (NM_001130713, intron 3 of 10) intron (NM_001130713, intron 3 of 10) 58285 NM_001166119 51176 Hs.743478 NM_016269 ENSG00000138795 LEF1 LEF-1|TCF10|TCF1ALPHA|TCF7L3 lymphoid enhancer binding factor 1 protein-coding chr18-2825 chr18 6432110 6432320 + 3.77 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -16956 NM_001365765 91133 Hs.128279 NM_173464 ENSG00000154655 L3MBTL4 HsT1031 L3MBTL histone methyl-lysine binding protein 4 protein-coding chr16-3766 chr16 27750021 27750231 + 3.77 0.000 exon (NM_015202, exon 16 of 28) exon (NM_015202, exon 16 of 28) -31097 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr20-3618 chr20 6769421 6769631 + 3.77 0.000 intron (NM_001200, intron 1 of 2) intron (NM_001200, intron 1 of 2) 1840 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr5-5614 chr5 153456823 153457033 + 3.77 0.000 Intergenic LTR78|LTR|ERV1 -33596 NM_001258020 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr1-12150 chr1 176974293 176974503 + 3.77 0.000 intron (NM_207108, intron 8 of 21) AluSg|SINE|Alu 55047 NR_030163 574441 NR_030163 ENSG00000202609 MIR488 MIRN488|hsa-mir-488|mir-488 microRNA 488 ncRNA chr3-9375 chr3 47213498 47213708 + 3.77 0.000 intron (NR_033373, intron 2 of 6) MLT1A0|LTR|ERVL-MaLR 37006 NR_145712 109617025 NR_145712 SNORD13J - small nucleolar RNA, C/D box 13J snoRNA chr16-6367 chr16 51632218 51632428 + 3.77 0.000 Intergenic Intergenic -130196 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr5-4332 chr5 157872612 157872822 + 3.77 0.000 Intergenic L1ME2|LINE|L1 -13572 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr19-5211 chr19 29566567 29566777 + 3.77 0.000 Intergenic Intergenic -39611 NR_027368 10775 Hs.412870 NM_006627 ENSG00000105171 POP4 RPP29 POP4 homolog, ribonuclease P/MRP subunit protein-coding chr2-13156 chr2 119474558 119474768 + 3.77 0.000 intron (NM_002980, intron 3 of 12) intron (NM_002980, intron 3 of 12) -1791 NR_147846 107105282 Hs.670673 NR_147846 ENSG00000231013 LOC107105282 - uncharacterized LOC107105282 ncRNA chr20-2300 chr20 5639261 5639471 + 3.77 0.000 Intergenic SVA_C|Retroposon|SVA -28360 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr13-4145 chr13 84790402 84790612 + 3.77 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 6853 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA chr13-2970 chr13 71564389 71564599 + 3.77 0.000 intron (NM_080759, intron 4 of 10) intron (NM_080759, intron 4 of 10) 302698 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr11-8964 chr11 20237657 20237867 + 3.77 0.000 Intergenic L1M1|LINE|L1 -77287 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr2-4795 chr2 41560108 41560318 + 3.77 0.000 Intergenic AluY|SINE|Alu -317342 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr5-8162 chr5 102903130 102903340 + 3.77 0.000 intron (NR_157231, intron 5 of 14) intron (NR_157231, intron 5 of 14) 37412 NM_000919 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr2-10554 chr2 238346032 238346242 + 3.77 0.000 intron (NM_015650, intron 9 of 16) intron (NM_015650, intron 9 of 16) 25593 NM_001139490 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding chr7-7631 chr7 136863890 136864100 + 3.77 0.000 Intergenic Intergenic -4657 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr20-2387 chr20 18063244 18063454 + 3.77 0.000 Intergenic L1ME3D|LINE|L1 -4161 NM_001303462 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr4-8249 chr4 139540920 139541130 + 3.77 0.000 intron (NR_131339, intron 3 of 3) intron (NR_131339, intron 3 of 3) 15744 NR_131339 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr18-2917 chr18 12431168 12431378 + 3.77 0.000 3' UTR (NM_006553, exon 7 of 7) 3' UTR (NM_006553, exon 7 of 7) -1501 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chr12-6766 chr12 7582924 7583134 + 3.77 0.000 Intergenic MER21-int|LTR|ERVL -79211 NM_203416 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding chr6-5941 chr6 73545573 73545783 + 3.77 0.000 Intergenic AluSq2|SINE|Alu -24646 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr18-3278 chr18 52275467 52275677 + 3.77 0.000 Intergenic Intergenic -64625 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr2-8556 chr2 134064142 134064352 + 3.77 0.000 Intergenic SVA_D|Retroposon|SVA -55688 NM_001371457 chr18-2328 chr18 8016442 8016652 + 3.77 0.000 intron (NM_002845, intron 7 of 30) AluSz|SINE|Alu 350487 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr13-1594 chr13 41522684 41522894 + 3.77 0.000 Intergenic Intergenic 45606 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr5-6850 chr5 116883106 116883316 + 3.77 0.000 Intergenic (AAAG)n|Simple_repeat|Simple_repeat -121002 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr14-2453 chr14 77780163 77780373 + 3.77 0.000 Intergenic AluJo|SINE|Alu -19112 NM_012245 22938 Hs.445498 NM_012245 ENSG00000100603 SNW1 Bx42|FUN20|NCOA-62|PRPF45|Prp45|SKIIP|SKIP|SKIP1 SNW domain containing 1 protein-coding chr12-7112 chr12 46034000 46034210 + 3.77 0.000 Intergenic HERVH-int|LTR|ERV1 -43531 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr15-3644 chr15 81770856 81771066 + 3.77 0.000 Intergenic L1ME3A|LINE|L1 275057 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr2-9689 chr2 43319121 43319331 + 3.77 0.000 intron (NM_001083953, intron 31 of 37) intron (NM_001083953, intron 31 of 37) 92015 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA chr3-4486 chr3 53098738 53098948 + 3.77 0.000 intron (NM_052859, intron 11 of 12) intron (NM_052859, intron 11 of 12) 31592 NM_052859 91869 Hs.631910 NM_052859 ENSG00000163933 RFT1 CDG1N RFT1 homolog protein-coding chr9-7588 chr9 36352318 36352528 + 3.77 0.000 intron (NM_194328, intron 8 of 11) intron (NM_194328, intron 8 of 11) 47846 NM_194329 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr6-5515 chr6 166286076 166286286 + 3.77 0.000 Intergenic AluSg|SINE|Alu 22211 NM_175922 285800 Hs.731862 NM_175922 ENSG00000176381 PRR18 - proline rich 18 protein-coding chr3-9001 chr3 18241251 18241461 + 3.77 0.000 intron (NR_161333, intron 4 of 4) L1ME1|LINE|L1 183983 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr1-15250 chr1 112722370 112722580 + 3.77 0.000 intron (NM_001004440, intron 2 of 4) intron (NM_001004440, intron 2 of 4) 1908 NM_182759 284467 Hs.439116 NM_182759 ENSG00000184599 TAFA3 FAM19A3|TAFA-3 TAFA chemokine like family member 3 protein-coding chrX-4820 chrX 101886227 101886437 + 3.77 0.000 intron (NM_001282401, intron 8 of 8) intron (NM_001282401, intron 8 of 8) -28755 NR_159738 55998 Hs.307077 NM_032946 ENSG00000126952 NXF5 - nuclear RNA export factor 5 protein-coding chr11-5650 chr11 124592916 124593126 + 3.77 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -18407 NM_052959 116337 Hs.99235 NM_052959 ENSG00000154143 PANX3 PX3 pannexin 3 protein-coding chr2-10683 chr2 24810565 24810775 + 3.77 0.000 intron (NM_001322101, intron 3 of 7) AluSq2|SINE|Alu 17245 NR_136183 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr11-10197 chr11 95933827 95934037 + 3.77 0.000 Intergenic LTR22C0|LTR|ERVK -9725 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr19-5195 chr19 17054000 17054210 + 3.77 0.000 intron (NM_001011699, intron 9 of 10) MLT1C|LTR|ERVL-MaLR 21347 NM_033417 93323 Hs.404088 NM_033417 ENSG00000131351 HAUS8 DGT4|HICE1|NY-SAR-48 HAUS augmin like complex subunit 8 protein-coding chrX-4303 chrX 43751828 43752038 + 3.77 0.000 Intergenic Intergenic 97026 NM_001270458 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr1-13867 chr1 21210776 21210986 + 3.77 0.000 Intergenic AluSc5|SINE|Alu -33984 NM_001198802 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr19-5762 chr19 20214593 20214803 + 3.77 0.000 Intergenic SVA_D|Retroposon|SVA 47484 NM_052852 90649 Hs.590991 NM_052852 ENSG00000256229 ZNF486 KRBO2 zinc finger protein 486 protein-coding chrX-4116 chrX 25562191 25562401 + 3.77 0.000 Intergenic Intergenic -546331 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr5-3840 chr5 118893250 118893460 + 3.77 0.000 intron (NM_001308081, intron 4 of 5) AluSz|SINE|Alu -81231 NR_128710 103504734 NR_128710 ENSG00000283475 MIR1244-4 hsa-mir-1244-4 microRNA 1244-4 ncRNA chr19-5391 chr19 11316727 11316937 + 3.77 0.000 TTS (NR_104199) TTS (NR_104199) 20672 NM_001282510 26526 Hs.579784 NM_012466 ENSG00000130167 TSPAN16 TM-8|TM4-B|TM4SF16 tetraspanin 16 protein-coding chrX-4656 chrX 80429970 80430180 + 3.77 0.000 intron (NM_152630, intron 1 of 2) LTR25-int|LTR|ERV1 9628 NM_152630 169966 Hs.367959 NM_152630 ENSG00000174016 TENT5D CT1.26|CT112|FAM46D terminal nucleotidyltransferase 5D protein-coding chr7-8676 chr7 72917524 72917734 + 3.77 0.000 intron (NM_001257190, intron 4 of 15) MLT1B|LTR|ERVL-MaLR 27002 NM_172020 9883 Hs.655217 NM_172020 ENSG00000196313 POM121 P145|POM121A POM121 transmembrane nucleoporin protein-coding chr7-6532 chr7 41605296 41605506 + 3.77 0.000 Intergenic AluSz6|SINE|Alu -88518 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr13-3842 chr13 49128099 49128309 + 3.77 0.000 intron (NM_001079673, intron 4 of 25) L2a|LINE|L2 17887 NM_014923 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding chr11-8924 chr11 17351953 17352163 + 3.77 0.000 intron (NM_001202439, intron 1 of 4) CpG 258 NM_001202439 374383 Hs.146274 NM_001009913 ENSG00000188211 NCR3LG1 B7-H6|B7H6|DKFZp686O24166 natural killer cell cytotoxicity receptor 3 ligand 1 protein-coding chr2-9878 chr2 205556575 205556785 + 3.77 0.000 intron (NM_205863, intron 21 of 21) intron (NM_205863, intron 21 of 21) -125820 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr16-2982 chr16 17718786 17718996 + 3.77 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -247931 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr10-8653 chr10 99902219 99902429 + 3.77 0.000 intron (NM_015221, intron 6 of 16) AluSx|SINE|Alu 11768 NM_001318327 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr3-5415 chr3 168355770 168355980 + 3.77 0.000 intron (NR_021485, intron 3 of 15) MER102c|DNA|hAT-Charlie 106353 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr9-8508 chr9 125039729 125039939 + 3.77 0.000 intron (NM_173690, intron 4 of 18) MLT1H|LTR|ERVL-MaLR -98751 NM_002077 2800 Hs.59504 NM_002077 ENSG00000136935 GOLGA1 golgin-97 golgin A1 protein-coding chr15-3691 chr15 41142872 41143082 + 3.77 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -26697 NM_017553 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr2-11160 chr2 148411400 148411610 + 3.77 0.000 intron (NM_018328, intron 5 of 14) L1PA15|LINE|L1 -233246 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr20-4128 chr20 42511946 42512156 + 3.77 0.000 intron (NM_133170, intron 7 of 31) L1ME4b|LINE|L1 -173432 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr5-6316 chr5 128380445 128380655 + 3.77 0.000 intron (NM_001999, intron 11 of 64) intron (NM_001999, intron 11 of 64) 157695 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr5-9106 chr5 173181556 173181766 + 3.77 0.000 Intergenic Intergenic 37130 NM_013979 662 Hs.145726 NM_001205 ENSG00000113734 BNIP1 NIP1|SEC20|TRG-8 BCL2 interacting protein 1 protein-coding chr5-6588 chr5 28093536 28093746 + 3.77 0.000 Intergenic AluSx|SINE|Alu 194024 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr6-7791 chr6 97748531 97748741 + 3.77 0.000 Intergenic AluYa8|SINE|Alu -275895 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr4-3533 chr4 164807813 164808023 + 3.77 0.000 Intergenic Intergenic 53787 NM_001352885 100505989 Hs.328236 NM_001352885 ENSG00000248771 SMIM31 LINC01207 small integral membrane protein 31 protein-coding chr4-6289 chr4 82479570 82479780 + 3.77 0.000 Intergenic LTR17|LTR|ERV1 49085 NR_120457 58478 Hs.18442 NM_021204 ENSG00000145293 ENOPH1 E1|MASA|MST145|mtnC enolase-phosphatase 1 protein-coding chr3-6920 chr3 157605335 157605545 + 3.77 0.000 Intergenic AluJr|SINE|Alu 62096 NM_001130001 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr4-8352 chr4 147678114 147678324 + 3.77 0.000 intron (NM_001350142, intron 2 of 12) intron (NM_001350142, intron 2 of 12) 5944 NM_138364 90826 Hs.591692 NM_138364 ENSG00000164169 PRMT9 PRMT10 protein arginine methyltransferase 9 protein-coding GL383581.2-2 GL383581.2 70527 70737 + 3.77 0.000 NA NA NA NA chr11-10174 chr11 93904404 93904614 + 3.77 0.000 Intergenic Intergenic -53891 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr1-15511 chr1 156409380 156409590 + 3.77 0.000 intron (NM_006365, intron 4 of 6) intron (NM_006365, intron 4 of 6) 10944 NR_029691 407046 NR_029691 ENSG00000207933 MIR9-1 MIRN9-1|hsa-mir-9-1|miRNA9-1|mir-9-1 microRNA 9-1 ncRNA chr10-3876 chr10 43881955 43882165 + 3.77 0.000 intron (NR_038268, intron 4 of 4) intron (NR_038268, intron 4 of 4) 22649 NR_038268 100506835 Hs.462615 NR_038268 ENSG00000226808 LINC00840 - long intergenic non-protein coding RNA 840 ncRNA chr16-6631 chr16 68008632 68008842 + 3.77 0.000 Intergenic MER5B|DNA|hAT-Charlie 7174 NM_001282442 100131303 Hs.655900 NM_001282442 ENSG00000263201 DPEP2NB - DPEP2 neighbor protein-coding chr15-5032 chr15 83380287 83380497 + 3.77 0.000 Intergenic Intergenic -66836 NM_001301109 6457 Hs.270055 NM_003027 ENSG00000140600 SH3GL3 CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13 SH3 domain containing GRB2 like 3, endophilin A3 protein-coding KN538364.1-1 KN538364.1 121678 121888 + 3.77 0.000 NA NA NA NA chr5-6065 chr5 1959396 1959606 + 3.77 0.000 Intergenic Intergenic 72170 NR_109912 101929081 Hs.519180 NR_109912 ENSG00000249326 CTD-2194D22.4 - uncharacterized LOC101929081 ncRNA chr19-6685 chr19 35336229 35336439 + 3.77 0.000 exon (NM_001185101, exon 4 of 12) exon (NM_001185101, exon 4 of 12) 7147 NM_001771 933 Hs.579691 NM_001771 ENSG00000012124 CD22 SIGLEC-2|SIGLEC2 CD22 molecule protein-coding chr14-5361 chr14 103269868 103270078 + 3.77 0.000 Intergenic MER72|LTR|ERV1 -47311 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr13-3538 chr13 23858451 23858661 + 3.77 0.000 intron (NM_005932, intron 10 of 18) L2c|LINE|L2 -30312 NM_001014442 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr7-6562 chr7 66234993 66235203 + 3.77 0.000 intron (NM_003596, intron 1 of 5) intron (NM_003596, intron 1 of 5) 29764 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr8-5490 chr8 52787560 52787770 + 3.77 0.000 Intergenic Intergenic -73199 NM_001083617 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding KI270870.1-2 KI270870.1 144442 144652 + 3.77 0.000 NA NA NA NA chr3-7926 chr3 146269099 146269309 + 3.77 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -18025 NM_001128306 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr5-6035 chr5 167620435 167620645 + 3.77 0.000 intron (NM_001368145, intron 1 of 26) intron (NM_001368145, intron 1 of 26) 46881 NM_001368146 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr3-7848 chr3 114860885 114861095 + 3.77 0.000 intron (NM_001348805, intron 4 of 10) intron (NM_001348805, intron 4 of 10) -12043 NR_126422 104413890 Hs.612732 NR_126422 ENSG00000239946 ZBTB20-AS3 - ZBTB20 antisense RNA 3 ncRNA chr4-6002 chr4 189099608 189099818 + 3.77 0.000 Intergenic Intergenic 323056 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr7-9281 chr7 125318206 125318416 + 3.77 0.000 intron (NR_110188, intron 3 of 8) intron (NR_110188, intron 3 of 8) -54020 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr13-3110 chr13 61861296 61861506 + 3.77 0.000 Intergenic AluYk4|SINE|Alu 168147 NR_046995 100874143 Hs.552684 NR_046995 ENSG00000229578 LINC00358 - long intergenic non-protein coding RNA 358 ncRNA chr1-11957 chr1 72110133 72110343 + 3.77 0.000 intron (NM_173808, intron 1 of 6) intron (NM_173808, intron 1 of 6) 172301 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr1-13585 chr1 8781382 8781592 + 3.77 0.000 intron (NM_001042681, intron 1 of 22) AluJo|SINE|Alu 36153 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr1-10045 chr1 90113510 90113720 + 3.77 0.000 Intergenic Intergenic 118505 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr19-5176 chr19 10186802 10187012 + 3.77 0.000 intron (NM_001379, intron 1 of 39) intron (NM_001379, intron 1 of 39) 8046 NM_001318730 1786 Hs.202672 NM_001379 ENSG00000130816 DNMT1 ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT|m.HsaI DNA methyltransferase 1 protein-coding chr9-7011 chr9 115829869 115830079 + 3.77 0.000 Intergenic Intergenic -85735 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr7-6899 chr7 72717224 72717434 + 3.77 0.000 intron (NM_001145440, intron 9 of 13) LTR32|LTR|ERVL 19426 NR_039794 100616331 NR_039794 ENSG00000264494 MIR4650-2 - microRNA 4650-2 ncRNA chr10-6307 chr10 102826985 102827195 + 3.77 0.000 Intergenic AluJo|SINE|Alu 10323 NM_000102 1586 Hs.438016 NM_000102 ENSG00000148795 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450 family 17 subfamily A member 1 protein-coding chr13-3598 chr13 28819766 28819976 + 3.77 0.000 promoter-TSS (NM_001366650) promoter-TSS (NM_001366650) -468 NM_001366650 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr11-7773 chr11 85386868 85387078 + 3.77 0.000 intron (NM_001142699, intron 3 of 27) AluSq2|SINE|Alu 240297 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-6696 chr12 4396312 4396522 + 3.77 0.000 Intergenic Intergenic -16705 NM_020638 8074 Hs.287370 NM_020638 ENSG00000118972 FGF23 ADHR|FGFN|HFTC2|HPDR2|HYPF|PHPTC fibroblast growth factor 23 protein-coding chr1-16216 chr1 208847371 208847581 + 3.77 0.000 Intergenic MIR3|SINE|MIR 118788 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr7-4969 chr7 150339750 150339960 + 3.77 0.000 intron (NM_002889, intron 3 of 5) intron (NM_002889, intron 3 of 5) 1774 NM_002889 5919 Hs.647064 NM_002889 ENSG00000106538 RARRES2 HP10433|TIG2 retinoic acid receptor responder 2 protein-coding chr1-14818 chr1 73257649 73257859 + 3.77 0.000 Intergenic AluSx3|SINE|Alu -48416 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chrX-3560 chrX 68913509 68913719 + 3.77 0.000 Intergenic Intergenic 84617 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr1-12124 chr1 165232923 165233133 + 3.77 0.000 intron (NM_177398, intron 4 of 8) intron (NM_177398, intron 4 of 8) 123213 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr5-7717 chr5 58624317 58624527 + 3.77 0.000 intron (NM_138453, intron 2 of 4) intron (NM_138453, intron 2 of 4) 41347 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr3-9291 chr3 42568591 42568801 + 3.77 0.000 intron (NM_001201572, intron 2 of 6) intron (NM_001201572, intron 2 of 6) -13144 NM_016305 51188 Hs.534454 NM_016305 ENSG00000008324 SS18L2 KIAA-iso SS18 like 2 protein-coding chr17-5210 chr17 16145623 16145833 + 3.77 0.000 intron (NM_001190440, intron 9 of 44) SVA_B|Retroposon|SVA 7468 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr11-8991 chr11 22901869 22902079 + 3.77 0.000 Intergenic Intergenic -41500 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding chr3-9633 chr3 59465318 59465528 + 3.77 0.000 Intergenic MER51C|LTR|ERV1 193074 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr6-8010 chr6 117250615 117250825 + 3.77 0.000 Intergenic L1PA2|LINE|L1 -14838 NM_153453 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chrX-2647 chrX 112153797 112154007 + 3.77 0.000 intron (NM_001004308, intron 2 of 2) L1M4|LINE|L1 70877 NM_001004308 340595 Hs.368140 NM_001004308 ENSG00000187823 RTL4 Mar4|Mart4|SIRH11|ZCCHC16 retrotransposon Gag like 4 protein-coding chr13-2003 chr13 33694333 33694543 + 3.77 0.000 Intergenic Intergenic -17644 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr15-5046 chr15 84648827 84649037 + 3.77 0.000 intron (NM_032856, intron 3 of 7) intron (NM_032856, intron 3 of 7) 5314 NR_130944 84942 Hs.745027 NM_032856 ENSG00000177082 WDR73 GAMOS|GAMOS1|HSPC264 WD repeat domain 73 protein-coding chr5-8246 chr5 111047253 111047463 + 3.77 0.000 Intergenic Intergenic -22722 NR_045089 85480 Hs.389874 NM_033035 ENSG00000145777 TSLP - thymic stromal lymphopoietin protein-coding chr10-9033 chr10 123325659 123325869 + 3.77 0.000 Intergenic Intergenic 171362 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr7-5060 chr7 1875038 1875248 + 3.77 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) -30890 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr18-2936 chr18 13470866 13471076 + 3.77 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) 11024 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr19-6973 chr19 48438420 48438630 + 3.77 0.000 intron (NM_000836, intron 10 of 12) AluSc8|SINE|Alu -7458 NM_031485 83743 Hs.400625 NM_031485 ENSG00000105447 GRWD1 CDW4|GRWD|RRB1|WDR28 glutamate rich WD repeat containing 1 protein-coding chr17-7443 chr17 12525651 12525861 + 3.77 0.000 Intergenic L1MB7|LINE|L1 -24212 NR_034144 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA chr15-3995 chr15 54332244 54332454 + 3.77 0.000 intron (NM_001329919, intron 14 of 31) intron (NM_001329919, intron 14 of 31) 319701 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr2-7310 chr2 240411129 240411339 + 3.77 0.000 Intergenic Intergenic -24429 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr9-8220 chr9 109411223 109411433 + 3.77 0.000 intron (NM_001145368, intron 13 of 24) intron (NM_001145368, intron 13 of 24) 6455 NR_026918 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chrX-5049 chrX 123340455 123340665 + 3.77 0.000 intron (NM_007325, intron 4 of 15) L2a|LINE|L2 156282 NM_007325 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr18-2841 chr18 7340760 7340970 + 3.77 0.000 Intergenic AluSx4|SINE|Alu 109761 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr20-4424 chr20 60173363 60173573 + 3.77 0.000 intron (NR_046099, intron 2 of 4) intron (NR_046099, intron 2 of 4) 34976 NR_046099 284757 Hs.542528 NM_001004305 ENSG00000228340 MIR646HG - MIR646 host gene ncRNA chr1-13634 chr1 10364053 10364263 + 3.77 0.000 intron (NM_001365951, intron 41 of 48) intron (NM_001365951, intron 41 of 48) -34906 NM_001304451 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr1-13807 chr1 18961844 18962054 + 3.77 0.000 Intergenic MIR|SINE|MIR -5273 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr5-7792 chr5 64526773 64526983 + 3.77 0.000 intron (NM_001029875, intron 2 of 5) intron (NM_001029875, intron 2 of 5) 20863 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr20-3993 chr20 35679064 35679274 + 3.77 0.000 intron (NR_037570, intron 8 of 13) L1MA1|LINE|L1 -14269 NM_001198863 8904 Hs.246413 NM_003915 ENSG00000214078 CPNE1 COPN1|CPN1 copine 1 protein-coding chr18-3148 chr18 41015448 41015658 + 3.77 0.000 Intergenic L1MA6|LINE|L1 505124 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr18-2858 chr18 8622658 8622868 + 3.77 0.000 intron (NM_001025300, intron 1 of 5) MER11C|LTR|ERVK 13318 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr6-7243 chr6 41519976 41520186 + 3.77 0.000 TTS (NR_120347) TTS (NR_120347) 17637 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr22-3451 chr22 41438591 41438801 + 3.77 0.000 intron (NM_016272, intron 1 of 1) intron (NM_016272, intron 1 of 1) 8105 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding chr8-5011 chr8 3730300 3730510 + 3.77 0.000 intron (NM_033225, intron 6 of 69) intron (NM_033225, intron 6 of 69) -1001954 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr10-5071 chr10 43664090 43664300 + 3.77 0.000 intron (NR_038867, intron 1 of 4) intron (NR_038867, intron 1 of 4) -15314 NM_006973 7580 Hs.522885 NM_006973 ENSG00000169740 ZNF32 KOX30 zinc finger protein 32 protein-coding chr14-3992 chr14 35889025 35889235 + 3.77 0.000 Intergenic HAL1M8|LINE|L1 62792 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr1-15603 chr1 160963740 160963950 + 3.77 0.000 Intergenic Intergenic -9036 NM_080878 142683 Hs.385631 NM_080878 ENSG00000158764 ITLN2 HL-2|HL2 intelectin 2 protein-coding chr18-2468 chr18 43108114 43108324 + 3.77 0.000 intron (NM_001272077, intron 1 of 5) intron (NM_001272077, intron 1 of 5) 7466 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr8-6156 chr8 31479657 31479867 + 3.77 0.000 Intergenic LTR8A|LTR|ERV1 -159990 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr3-9963 chr3 95246066 95246276 + 3.77 0.000 Intergenic Intergenic 307908 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr15-4612 chr15 61338887 61339097 + 3.77 0.000 Intergenic Intergenic -109690 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr17-4455 chr17 52939709 52939919 + 3.77 0.000 Intergenic AluY|SINE|Alu -45691 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding chr10-6078 chr10 130835759 130835969 + 3.77 0.000 Intergenic Intergenic 126804 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr19-5371 chr19 8036201 8036411 + 3.77 0.000 Intergenic Intergenic -16456 NM_001201359 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr19-7069 chr19 55301828 55302038 + 3.77 0.000 intron (NM_032430, intron 8 of 18) intron (NM_032430, intron 8 of 18) 17936 NM_032430 84446 Hs.182081 NM_032430 ENSG00000160469 BRSK1 hSAD1 BR serine/threonine kinase 1 protein-coding chr20-4164 chr20 44441418 44441628 + 3.77 0.000 Intergenic L1ME1|LINE|L1 9034 NR_109893 101927242 Hs.143307 NR_109893 ENSG00000168746 LINC01430 - long intergenic non-protein coding RNA 1430 ncRNA chr5-7154 chr5 3140468 3140678 + 3.77 0.000 Intergenic L2b|LINE|L2 -37262 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chrX-1516 chrX 18380097 18380307 + 3.77 0.000 Intergenic L1MCa|LINE|L1 -25514 NM_006089 10389 Hs.495774 NM_006089 ENSG00000102098 SCML2 - Scm polycomb group protein like 2 protein-coding chr1-15674 chr1 166417863 166418073 + 3.77 0.000 Intergenic Intergenic 72071 NR_146890 105371590 Hs.575926 NR_146890 ENSG00000234142 LINC01675 - long intergenic non-protein coding RNA 1675 ncRNA chr6-7217 chr6 40213164 40213374 + 3.77 0.000 Intergenic AluSx1|SINE|Alu 142737 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA chr12-7864 chr12 104946181 104946391 + 3.77 0.000 intron (NM_001352169, intron 1 of 11) AluJr|SINE|Alu 12004 NM_001352172 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr7-8855 chr7 88880198 88880408 + 3.77 0.000 intron (NM_181646, intron 1 of 3) intron (NM_181646, intron 1 of 3) -84566 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr10-8576 chr10 95679607 95679817 + 3.77 0.000 intron (NM_015631, intron 13 of 13) AluYa8|SINE|Alu 14215 NM_015631 26123 Hs.438991 NM_015631 ENSG00000119977 TCTN3 C10orf61|JBTS18|OFD4|TECT3 tectonic family member 3 protein-coding chr3-10379 chr3 128873146 128873356 + 3.77 0.000 Intergenic L2a|LINE|L2 -1710 NR_034179 653712 Hs.653243 NR_034179 ENSG00000231305 LOC653712 - intraflagellar transport 122 homolog (Chlamydomonas) pseudogene pseudo chr21-1199 chr21 43997485 43997695 + 3.77 0.000 Intergenic L1M2c|LINE|L1 -14719 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr2-10416 chr2 193490050 193490260 + 3.77 0.000 Intergenic MER50|LTR|ERV1 740310 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA chrX-4208 chrX 36869753 36869963 + 3.77 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -138501 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr3-7058 chr3 175806592 175806802 + 3.77 0.000 3' UTR (NM_207015, exon 14 of 14) 3' UTR (NM_207015, exon 14 of 14) -30364 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr5-6390 chr5 141915936 141916146 + 3.77 0.000 Intergenic Intergenic -7830 NM_001142603 9812 Hs.210532 NM_014773 ENSG00000081791 DELE1 DELE|KIAA0141 DAP3 binding cell death enhancer 1 protein-coding chr3-8709 chr3 188319850 188320060 + 3.77 0.000 intron (NM_005578, intron 2 of 10) L1MD3|LINE|L1 94550 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr2-11238 chr2 167396400 167396610 + 3.77 0.000 Intergenic Intergenic 209133 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr6-6766 chr6 3485190 3485400 + 3.77 0.000 Intergenic Intergenic -28736 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr2-4283 chr2 232128341 232128551 + 3.77 0.000 intron (NR_046477, intron 6 of 18) intron (NR_046477, intron 6 of 18) -44207 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr5-6525 chr5 5912312 5912522 + 3.77 0.000 Intergenic Intergenic 424875 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr6-7210 chr6 39801675 39801885 + 3.77 0.000 intron (NM_015345, intron 1 of 24) intron (NM_015345, intron 1 of 24) 8783 NM_015345 23500 Hs.357128 NM_015345 ENSG00000146122 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding chr12-7002 chr12 31412797 31413007 + 3.77 0.000 intron (NM_144973, intron 13 of 20) intron (NM_144973, intron 13 of 20) -43601 NR_146469 101929027 Hs.266041 NR_146469 ENSG00000256232 LINC02387 - long intergenic non-protein coding RNA 2387 ncRNA chr16-5239 chr16 30850152 30850362 + 3.77 0.000 intron (NM_001286526, intron 5 of 5) AluJb|SINE|Alu 25066 NR_039744 100616231 NR_039744 ENSG00000265991 MIR4519 - microRNA 4519 ncRNA chr10-8416 chr10 84711538 84711748 + 3.77 0.000 Intergenic Intergenic 286474 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr6-7378 chr6 49511481 49511691 + 3.77 0.000 intron (NM_001010904, intron 1 of 5) L2a|LINE|L2 11663 NM_001010904 389396 Hs.585172 NM_001010904 ENSG00000203972 GLYATL3 C6orf140|bA28H17.2 glycine-N-acyltransferase like 3 protein-coding chrX-3672 chrX 104157196 104157406 + 3.77 0.000 promoter-TSS (NM_001012755) promoter-TSS (NM_001012755) -292 NM_001012755 401612 Hs.660022 NM_001012755 ENSG00000269743 SLC25A53 MCART6 solute carrier family 25 member 53 protein-coding chr5-6740 chr5 76984641 76984851 + 3.77 0.000 Intergenic SVA_D|Retroposon|SVA 31701 NM_001882 1393 Hs.115617 NM_001882 ENSG00000145708 CRHBP CRF-BP|CRFBP corticotropin releasing hormone binding protein protein-coding chr12-7241 chr12 51485715 51485925 + 3.77 0.000 exon (NM_001258401, exon 17 of 25) exon (NM_001258401, exon 17 of 25) 60703 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr10-7619 chr10 22214477 22214687 + 3.77 0.000 Intergenic Intergenic -4599 NM_001199938 340900 Hs.450519 NM_001199938 ENSG00000223601 EBLN1 EBLN-1 endogenous Bornavirus like nucleoprotein 1 protein-coding chr4-8697 chr4 181504635 181504845 + 3.77 0.000 Intergenic Intergenic -239711 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr14-4359 chr14 24813399 24813609 + 3.77 0.000 intron (NM_001351943, intron 6 of 6) intron (NM_001351943, intron 6 of 6) -179314 NR_144343 3002 Hs.1051 NM_004131 ENSG00000100453 GZMB C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B protein-coding chr10-8911 chr10 115271668 115271878 + 3.77 0.000 intron (NM_207303, intron 13 of 28) ERVL-B4-int|LTR|ERVL 178408 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr2-9810 chr2 136486586 136486796 + 3.77 0.000 Intergenic AluY|SINE|Alu -278854 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr13-2979 chr13 77039405 77039615 + 3.77 0.000 Intergenic MIRb|SINE|MIR -12351 NM_012158 26224 Hs.508284 NM_012158 ENSG00000005812 FBXL3 FBL3|FBL3A|FBXL3A|IDDSFAS F-box and leucine rich repeat protein 3 protein-coding chr14-5281 chr14 100568078 100568288 + 3.77 0.000 promoter-TSS (NM_001159531) promoter-TSS (NM_001159531) -113 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr3-11016 chr3 181242574 181242784 + 3.77 0.000 intron (NR_075091, intron 3 of 7) intron (NR_075091, intron 3 of 7) 10942 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr18-1475 chr18 60094787 60094997 + 3.77 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 194896 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr17-7731 chr17 33520661 33520871 + 3.77 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 12994 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr3-8493 chr3 128894782 128894992 + 3.77 0.000 intron (NM_014049, intron 3 of 17) AluSz6|SINE|Alu 15267 NM_014049 28976 Hs.567482 NM_014049 ENSG00000177646 ACAD9 MC1DN20|NPD002 acyl-CoA dehydrogenase family member 9 protein-coding chr18-3550 chr18 76800380 76800590 + 3.77 0.000 intron (NR_040024, intron 2 of 2) L1MEd|LINE|L1 21810 NR_040024 100131655 Hs.385806 NR_040024 ENSG00000264278 ZNF236-DT - ZNF236 divergent transcript ncRNA chrX-986 chrX 1365400 1365610 + 3.77 0.000 intron (NM_002183, intron 9 of 11) CpG 26608 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chrX-3711 chrX 114697837 114698047 + 3.77 0.000 intron (NM_001256761, intron 2 of 5) MLT1E2|LTR|ERVL-MaLR -17291 NR_031578 100302153 NR_031578 ENSG00000221710 MIR1298 MIRN1298|hsa-mir-1298 microRNA 1298 ncRNA chr16-6032 chr16 9680101 9680311 + 3.77 0.000 Intergenic LTR9A1|LTR|ERV1 -224701 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr13-3567 chr13 25857400 25857610 + 3.77 0.000 intron (NM_016529, intron 30 of 36) AluJr|SINE|Alu 193555 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr6-6073 chr6 141957403 141957613 + 3.77 0.000 Intergenic PABL_B-int|LTR|ERV1 131291 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr20-3700 chr20 15296184 15296394 + 3.77 0.000 intron (NM_001351663, intron 6 of 17) L1MC5a|LINE|L1 99449 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr5-7096 chr5 178513003 178513213 + 3.77 0.000 intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) 77285 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chrX-4855 chrX 104589025 104589235 + 3.77 0.000 intron (NM_017416, intron 1 of 10) MER85|DNA|PiggyBac 22931 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr1-11469 chr1 95808177 95808387 + 3.77 0.000 Intergenic L3|LINE|CR1 -183786 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr18-2394 chr18 2104516 2104726 + 3.77 0.000 Intergenic Intergenic 466884 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr12-7039 chr12 39216649 39216859 + 3.77 0.000 Intergenic HAL1|LINE|L1 226366 NM_017641 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr1-11185 chr1 241206859 241207069 + 3.77 0.000 intron (NM_001282778, intron 2 of 16) AluY|SINE|Alu 74692 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr22-3477 chr22 44252952 44253162 + 3.77 0.000 intron (NM_001099294, intron 4 of 4) L1MB3|LINE|L1 59894 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr16-4190 chr16 11179846 11180056 + 3.77 0.000 3' UTR (NM_015226, exon 23 of 23) 3' UTR (NM_015226, exon 23 of 23) 76231 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr4-8214 chr4 136160606 136160816 + 3.77 0.000 Intergenic Intergenic -247031 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr20-3485 chr20 59000856 59001066 + 3.77 0.000 intron (NM_001336, intron 3 of 5) AluSz|SINE|Alu 6293 NM_001336 1522 Hs.252549 NM_001336 ENSG00000101160 CTSZ CTSX cathepsin Z protein-coding chr2-11653 chr2 6730887 6731097 + 3.77 0.000 intron (NR_038369, intron 4 of 5) intron (NR_038369, intron 4 of 5) 39319 NR_038369 400941 Hs.446195 NM_001001695 ENSG00000205837 LINC00487 - long intergenic non-protein coding RNA 487 ncRNA chr14-2914 chr14 39285556 39285766 + 3.77 0.000 intron (NM_001354157, intron 4 of 22) SVA_C|Retroposon|SVA 18276 NM_001247990 4253 Hs.287694 NM_005930 ENSG00000150527 MIA2 CTAGE5|MEA6|MGEA|MGEA11|MGEA6|TALI MIA SH3 domain ER export factor 2 protein-coding chr8-3644 chr8 4477165 4477375 + 3.77 0.000 intron (NM_033225, intron 2 of 69) intron (NM_033225, intron 2 of 69) 517644 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr18-2489 chr18 51243246 51243456 + 3.77 0.000 Intergenic Intergenic -45670 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr7-2957 chr7 153603694 153603904 + 3.77 0.000 Intergenic AluSx1|SINE|Alu -144334 NM_001364499 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr1-16559 chr1 234107470 234107680 + 3.77 0.000 intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -106636 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr1-11720 chr1 10848175 10848385 + 3.77 0.000 Intergenic AluSx|SINE|Alu -51634 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr16-5007 chr16 28853880 28854090 + 3.77 0.000 intron (NM_001308293, intron 1 of 10) AluY|SINE|Alu 7385 NM_001308293 25970 Hs.15744 NM_015503 ENSG00000178188 SH2B1 PSM|SH2B SH2B adaptor protein 1 protein-coding chr14-3803 chr14 65390218 65390428 + 3.77 0.000 Intergenic AluSc|SINE|Alu -20269 NM_178155 2530 Hs.597649 NM_004480 ENSG00000033170 FUT8 CDGF|CDGF1 fucosyltransferase 8 protein-coding chr10-7607 chr10 21142671 21142881 + 3.77 0.000 intron (NM_001173484, intron 2 of 6) MER1B|DNA|hAT-Charlie -31214 NR_046283 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA chr20-4209 chr20 46772678 46772888 + 3.77 0.000 Intergenic L1MB3|LINE|L1 63134 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATORS|ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr11-7514 chr11 7442761 7442971 + 3.77 0.000 intron (NR_103855, intron 4 of 4) L2b|LINE|L2 22969 NR_103855 100506258 Hs.661614 NR_103855 ENSG00000251364 LOC100506258 - uncharacterized LOC100506258 ncRNA chrX-3971 chrX 13108734 13108944 + 3.77 0.000 Intergenic Intergenic -64219 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chr16-5521 chr16 23781916 23782126 + 3.77 0.000 Intergenic FLAM_A|SINE|Alu 26995 NM_022097 63928 Hs.178589 NM_022097 ENSG00000166869 CHP2 - calcineurin like EF-hand protein 2 protein-coding chr14-2464 chr14 85974432 85974642 + 3.77 0.000 intron (NR_110155, intron 1 of 3) L1PA6|LINE|L1 39859 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr3-8757 chr3 2525080 2525290 + 3.77 0.000 intron (NM_175607, intron 3 of 24) intron (NM_175607, intron 3 of 24) 286356 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr15-2857 chr15 41529528 41529738 + 3.77 0.000 intron (NM_015540, intron 8 of 24) intron (NM_015540, intron 8 of 24) 14624 NM_015540 26015 Hs.371045 NM_015540 ENSG00000103932 RPAP1 - RNA polymerase II associated protein 1 protein-coding chrX-3588 chrX 77742456 77742666 + 3.77 0.000 intron (NM_000489, intron 1 of 34) L1M2|LINE|L1 43655 NM_000489 546 Hs.533526 NM_000489 ENSG00000085224 ATRX JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX ATRX chromatin remodeler protein-coding chr14-3874 chr14 89612980 89613190 + 3.77 0.000 intron (NM_001085471, intron 1 of 6) AluSg|SINE|Alu 6080 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr11-7982 chr11 10418558 10418768 + 3.77 0.000 intron (NR_103765, intron 3 of 3) Charlie9|DNA|hAT-Charlie -31658 NM_001172431 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr7-8570 chr7 64947512 64947722 + 3.65 0.000 Intergenic CpG 43419 NM_015852 51351 Hs.250693 NM_015852 ENSG00000152926 ZNF117 H-plk|HPF9 zinc finger protein 117 protein-coding chr11-7359 chr11 68244293 68244503 + 3.65 0.000 Intergenic AluJr|SINE|Alu 27575 NM_022338 53838 Hs.303025 NM_022338 ENSG00000171067 C11orf24 DM4E3 chromosome 11 open reading frame 24 protein-coding chr19-6687 chr19 35405569 35405779 + 3.65 0.000 promoter-TSS (NR_040046) promoter-TSS (NR_040046) 67 NR_040046 100128682 Hs.570008 NR_040046 ENSG00000205786 LINC01531 - long intergenic non-protein coding RNA 1531 ncRNA chr5-6693 chr5 63328990 63329200 + 3.65 0.000 Intergenic L1PA16|LINE|L1 633197 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr9-7089 chr9 128137197 128137407 + 3.65 0.000 Intergenic Intergenic 8773 NR_024425 389791 Hs.632678 NM_001013652 ENSG00000232850 PTGES2-AS1 - PTGES2 antisense RNA 1 (head to head) ncRNA chr16-4614 chr16 70005931 70006141 + 3.65 0.000 intron (NR_003610, intron 16 of 25) AluJb|SINE|Alu -24310 NR_036054 100302243 NR_036054 ENSG00000238728 MIR1972-1 MIR1972|hsa-mir-1972|hsa-mir-1972-1 microRNA 1972-1 ncRNA chr3-11234 chr3 196004649 196004859 + 3.65 0.000 Intergenic Intergenic -14475 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr13-3544 chr13 24218519 24218729 + 3.65 0.000 intron (NM_153023, intron 1 of 11) MER30|DNA|hAT-Charlie 35815 NR_046531 100874231 Hs.577998 NR_046531 ENSG00000227213 SPATA13-AS1 - SPATA13 antisense RNA 1 ncRNA chr15-4743 chr15 68774979 68775189 + 3.65 0.000 Intergenic MER5A|DNA|hAT-Charlie 26841 NR_036197 100422971 NR_036197 ENSG00000265195 MIR4312 - microRNA 4312 ncRNA chr1-15953 chr1 190980010 190980220 + 3.65 0.000 Intergenic LTR12|LTR|ERV1 248383 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chrX-3495 chrX 39799629 39799839 + 3.65 0.000 Intergenic Intergenic -37827 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr7-8788 chr7 81891418 81891628 + 3.65 0.000 Intergenic L1MA8|LINE|L1 -117654 NR_110077 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr1-14441 chr1 45974407 45974617 + 3.65 0.000 intron (NM_001324320, intron 5 of 29) AluJb|SINE|Alu 110164 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr7-4890 chr7 121794639 121794849 + 3.65 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -78417 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr17-6795 chr17 5251360 5251570 + 3.65 0.000 Intergenic AluSp|SINE|Alu -16605 NM_207103 388325 Hs.462080 NM_207103 ENSG00000161929 SCIMP C17orf87|UNQ5783 SLP adaptor and CSK interacting membrane protein protein-coding chr10-7906 chr10 50358860 50359070 + 3.65 0.000 intron (NM_147156, intron 6 of 10) intron (NM_147156, intron 6 of 10) -110355 NM_001143974 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chrY-27 chrY 10780555 10780765 + 3.65 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat 869862 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 ncRNA chrX-5109 chrX 128337500 128337710 + 3.65 0.000 Intergenic MSTA|LTR|ERVL-MaLR -285202 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr8-4938 chr8 107180970 107181180 + 3.65 0.000 Intergenic Intergenic 155440 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr3-5791 chr3 27009378 27009588 + 3.65 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 207040 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr1-13040 chr1 169178776 169178986 + 3.65 0.000 intron (NM_197972, intron 10 of 11) AluSx|SINE|Alu 72191 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr3-10798 chr3 160077358 160077568 + 3.65 0.000 intron (NR_108088, intron 3 of 9) AluSx3|SINE|Alu 56814 NR_104132 730109 Hs.99333 NR_104132 LINC01100 - long intergenic non-protein coding RNA 1100 ncRNA chr12-5018 chr12 83171358 83171568 + 3.65 0.000 Intergenic Intergenic 484308 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr15-4994 chr15 80411670 80411880 + 3.65 0.000 intron (NM_014862, intron 1 of 18) intron (NM_014862, intron 1 of 18) 7393 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding chr3-4530 chr3 122662915 122663125 + 3.65 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -17819 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr19-2989 chr19 36199406 36199616 + 3.65 0.000 intron (NM_001366190, intron 1 of 3) AluJb|SINE|Alu 14068 NM_001366189 147929 Hs.596338 NM_152477 ENSG00000196357 ZNF565 - zinc finger protein 565 protein-coding KI270834.1-1 KI270834.1 85411 85621 + 3.65 0.000 NA NA NA NA chr1-12224 chr1 211246824 211247034 + 3.65 0.000 Intergenic Intergenic -12348 NM_001350069 55758 Hs.356399 NM_018254 ENSG00000117625 RCOR3 - REST corepressor 3 protein-coding chr6-7772 chr6 96189094 96189304 + 3.65 0.000 intron (NM_006581, intron 2 of 2) intron (NM_006581, intron 2 of 2) 173225 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr16-6770 chr16 77036895 77037105 + 3.65 0.000 Intergenic L1MA2|LINE|L1 -154190 NM_014940 22879 Hs.513743 NM_014940 ENSG00000103111 MON1B HSRG1|SAND2|SRG1 MON1 homolog B, secretory trafficking associated protein-coding chr20-4103 chr20 40907003 40907213 + 3.65 0.000 Intergenic LTR102_Mam|LTR|ERVL -73605 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr15-3610 chr15 66712692 66712902 + 3.65 0.000 intron (NM_005585, intron 2 of 3) AluJr|SINE|Alu 10561 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr7-8155 chr7 29142523 29142733 + 3.65 0.000 intron (NM_001371261, intron 2 of 13) AluSx|SINE|Alu 3909 NM_019029 54504 Hs.233389 NM_019029 ENSG00000106066 CPVL HVLP carboxypeptidase vitellogenic like protein-coding chr5-5748 chr5 171324111 171324321 + 3.65 0.000 Intergenic Intergenic 14968 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr3-4553 chr3 138640938 138641148 + 3.65 0.000 Intergenic AluSc8|SINE|Alu 31994 NM_018147 55179 Hs.173438 NM_018147 ENSG00000158234 FAIM FAIM1 Fas apoptotic inhibitory molecule protein-coding chr11-10024 chr11 81976075 81976285 + 3.65 0.000 intron (NR_120571, intron 6 of 7) MIRc|SINE|MIR -85344 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr7-6975 chr7 104023245 104023455 + 3.65 0.000 Intergenic MER52A|LTR|ERV1 -33692 NM_005045 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chr8-7051 chr8 114106492 114106702 + 3.65 0.000 Intergenic Intergenic -669658 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr4-6189 chr4 46630851 46631061 + 3.65 0.000 Intergenic L1PA15|LINE|L1 -240828 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding chr13-4198 chr13 91366052 91366262 + 3.65 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 14843 NR_029508 407048 Hs.24115 NR_029508 ENSG00000283705 MIR92A1 C13orf25|MIR17HG|MIR92-1|MIRH1|MIRHG1|MIRN92-1|MIRN92A-1|MIRN92A1|miRNA92-1|mir-92a-1 microRNA 92a-1 ncRNA chr2-9699 chr2 47249609 47249819 + 3.65 0.000 intron (NR_110207, intron 1 of 2) intron (NR_110207, intron 1 of 2) -72778 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr10-4610 chr10 116166693 116166903 + 3.65 0.000 intron (NM_145793, intron 3 of 8) AluY|SINE|Alu 27991 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr12-6972 chr12 28928851 28929061 + 3.65 0.000 Intergenic Intergenic -220322 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr5-8464 chr5 131938021 131938231 + 3.65 0.000 intron (NM_001303622, intron 4 of 12) L1MB7|LINE|L1 7537 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chr16-5246 chr16 46558346 46558556 + 3.65 0.000 intron (NR_026556, intron 4 of 16) intron (NR_026556, intron 4 of 16) 10646 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr7-8948 chr7 97428308 97428518 + 3.65 0.000 Intergenic Intergenic -303673 NM_013997 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding chr12-6212 chr12 24740795 24741005 + 3.65 0.000 Intergenic Intergenic -156732 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr16-6257 chr16 30644061 30644271 + 3.65 0.000 Intergenic L2c|LINE|L2 -6612 NM_001320464 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 - proline rich 14 protein-coding chr5-7811 chr5 66230592 66230802 + 3.65 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -21251 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA chr4-7727 chr4 90126479 90126689 + 3.65 0.000 promoter-TSS (NM_001145065) promoter-TSS (NM_001145065) -949 NM_001145065 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr10-9153 chr10 128377232 128377442 + 3.65 0.000 Intergenic Intergenic 91387 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr6-7646 chr6 81766974 81767184 + 3.65 0.000 Intergenic Intergenic -14398 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr1-16666 chr1 242081763 242081973 + 3.65 0.000 Intergenic MLT2C1|LTR|ERVL -82770 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr1-4497 chr1 22710662 22710872 + 3.65 0.000 promoter-TSS (NM_001309193) promoter-TSS (NM_001309193) -71 NM_017449 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr3-10229 chr3 122620653 122620863 + 3.65 0.000 intron (NM_152615, intron 3 of 7) intron (NM_152615, intron 3 of 7) 5143 NM_001308321 165631 Hs.120250 NM_152615 ENSG00000173200 PARP15 ARTD7|BAL3|pART7 poly(ADP-ribose) polymerase family member 15 protein-coding chr20-3329 chr20 22945535 22945745 + 3.65 0.000 Intergenic Intergenic -89780 NM_001052 6754 Hs.673846 NM_001052 ENSG00000132671 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding chr6-5678 chr6 108568114 108568324 + 3.65 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 7302 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr20-3074 chr20 11357085 11357295 + 3.65 0.000 Intergenic Intergenic -83807 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr15-4384 chr15 42619474 42619684 + 3.65 0.000 intron (NM_020759, intron 3 of 32) MER1A|DNA|hAT-Charlie 43973 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr7-7321 chr7 45319992 45320202 + 3.65 0.000 Intergenic L1PA5|LINE|L1 162306 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr14-2963 chr14 50037474 50037684 + 3.65 0.000 intron (NR_131171, intron 6 of 8) AluSq4|SINE|Alu -30059 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr15-2568 chr15 55879277 55879487 + 3.65 0.000 intron (NM_001329212, intron 5 of 28) HAL1|LINE|L1 37749 NR_104302 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr2-6965 chr2 123826785 123826995 + 3.65 0.000 Intergenic LTR12C|LTR|ERV1 198284 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA chr12-5967 chr12 87531334 87531544 + 3.65 0.000 Intergenic L1PA5|LINE|L1 200700 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr20-3775 chr20 20833043 20833253 + 3.65 0.000 Intergenic LTR16C|LTR|ERVL -120504 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr1-14070 chr1 29259377 29259587 + 3.65 0.000 exon (NM_001195001, exon 5 of 30) exon (NM_001195001, exon 5 of 30) 22960 NM_133178 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr5-7434 chr5 30241246 30241456 + 3.65 0.000 Intergenic AluSx3|SINE|Alu 360791 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chrX-2976 chrX 25144741 25144951 + 3.65 0.000 Intergenic Intergenic -128881 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr3-7401 chr3 97419018 97419228 + 3.65 0.000 intron (NM_001080448, intron 6 of 17) AluSp|SINE|Alu -20484 NM_173655 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr8-4006 chr8 56539601 56539811 + 3.65 0.000 intron (NR_038236, intron 1 of 2) GA-rich|Low_complexity|Low_complexity 20117 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr18-2840 chr18 7306600 7306810 + 3.65 0.000 Intergenic Intergenic 75601 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr16-6765 chr16 75904071 75904281 + 3.65 0.000 Intergenic Intergenic -177686 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr13-1678 chr13 76415882 76416092 + 3.65 0.000 Intergenic AluSp|SINE|Alu 470418 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr3-8280 chr3 53743693 53743903 + 3.65 0.000 intron (NM_001128840, intron 22 of 47) intron (NM_001128840, intron 22 of 47) 102621 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr18-3480 chr18 71413566 71413776 + 3.65 0.000 Intergenic Intergenic 165285 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr14-3836 chr14 74436055 74436265 + 3.65 0.000 Intergenic Intergenic -9950 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chrX-3136 chrX 14023269 14023479 + 3.65 0.000 intron (NM_001042480, intron 1 of 3) AluSg|SINE|Alu 6518 NM_017856 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chr3-9063 chr3 25547016 25547226 + 3.65 0.000 intron (NR_110892, intron 3 of 6) LTR79|LTR|ERVL 88811 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr12-8349 chr12 131841636 131841846 + 3.65 0.000 exon (NM_016155, exon 5 of 10) exon (NM_016155, exon 5 of 10) 13348 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding GL000009.2-5 GL000009.2 188288 188498 + 3.65 0.000 NA NA NA NA chr14-2457 chr14 81106846 81107056 + 3.65 0.000 intron (NM_001142626, intron 7 of 8) AluSz|SINE|Alu 95883 NR_003021 677845 Hs.693251 NR_003021 ENSG00000221303 SNORA79 ACA65|SNORA79A small nucleolar RNA, H/ACA box 79 snoRNA chr4-7277 chr4 48979152 48979362 + 3.65 0.000 Intergenic AluJr|SINE|Alu -7018 NM_025087 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr2-7458 chr2 14592206 14592416 + 3.65 0.000 Intergenic AluY|SINE|Alu -40406 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr5-8505 chr5 133714380 133714590 + 3.65 0.000 Intergenic L2a|LINE|L2 -101944 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr4-5709 chr4 35353236 35353446 + 3.65 0.000 Intergenic HAL1b|LINE|L1 890598 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr2-11161 chr2 148575839 148576049 + 3.65 0.000 Intergenic Intergenic -68807 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr3-10891 chr3 170641849 170642059 + 3.65 0.000 intron (NR_135556, intron 2 of 5) intron (NR_135556, intron 2 of 5) -55879 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr10-8383 chr10 81584213 81584423 + 3.65 0.000 Intergenic L1PA16|LINE|L1 -290876 NM_001370083 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr3-8404 chr3 102653752 102653962 + 3.65 0.000 Intergenic Charlie10|DNA|hAT-Charlie 218842 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding chr7-7573 chr7 122761884 122762094 + 3.65 0.000 intron (NM_001167940, intron 1 of 29) AluSz6|SINE|Alu -59067 NM_198085 378925 Hs.675191 NM_198085 ENSG00000235631 RNF148 - ring finger protein 148 protein-coding chr1-11156 chr1 236943560 236943770 + 3.65 0.000 Intergenic MIRb|SINE|MIR 60776 NM_001276687 645745 Hs.632513 NM_001039954 ENSG00000244020 MT1HL1 MT1P2 metallothionein 1H like 1 protein-coding chr13-3213 chr13 21813623 21813833 + 3.65 0.000 Intergenic Intergenic 64432 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr22-2925 chr22 46963118 46963328 + 3.65 0.000 intron (NR_104292, intron 10 of 13) AluY|SINE|Alu -47181 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr1-14848 chr1 76936868 76937078 + 3.65 0.000 intron (NM_001320274, intron 2 of 2) (GT)n|Simple_repeat|Simple_repeat 69493 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chrX-1410 chrX 19389219 19389429 + 3.65 0.000 intron (NM_001001671, intron 18 of 28) intron (NM_001001671, intron 18 of 28) 45397 NM_000284 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr2-13949 chr2 185921417 185921627 + 3.65 0.000 Intergenic L1MCb|LINE|L1 -121371 NR_144454 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA chr3-7005 chr3 170614503 170614713 + 3.65 0.000 intron (NR_135556, intron 2 of 5) intron (NR_135556, intron 2 of 5) -28533 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr4-6542 chr4 175920627 175920837 + 3.65 0.000 intron (NR_048571, intron 1 of 5) AluSx|SINE|Alu 81959 NM_001261447 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr1-10983 chr1 216435330 216435540 + 3.65 0.000 Intergenic AluJo|SINE|Alu -11987 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr1-12589 chr1 32948503 32948713 + 3.65 0.000 intron (NM_153341, intron 2 of 8) intron (NM_153341, intron 2 of 8) 16201 NM_153341 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chrX-2997 chrX 45840710 45840920 + 3.65 0.000 Intergenic Intergenic 10675 NR_125365 401585 Hs.633348 NR_125365 ENSG00000231566 LINC02595 - long intergenic non-protein coding RNA 2595 ncRNA chrX-4164 chrX 31909405 31909615 + 3.65 0.000 intron (NM_000109, intron 47 of 78) MLT1K|LTR|ERVL-MaLR 245959 NM_004013 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr12-5981 chr12 93569573 93569783 + 3.65 0.000 promoter-TSS (NM_003877) promoter-TSS (NM_003877) -291 NM_003877 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr6-5766 chr6 163331303 163331513 + 3.65 0.000 Intergenic Intergenic -6935 NR_028390 285796 Hs.668693 NR_028390 ENSG00000281692 PACRG-AS1 - PACRG antisense RNA 1 ncRNA chr2-10255 chr2 119340643 119340853 + 3.65 0.000 intron (NM_001322329, intron 1 of 6) MIRb|SINE|MIR 25994 NM_001322330 130355 Hs.99488 NM_001017927 ENSG00000186132 C2orf76 AIM29 chromosome 2 open reading frame 76 protein-coding chr17-6277 chr17 41670833 41671043 + 3.65 0.000 Intergenic THE1B|LTR|ERVL-MaLR -17947 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding chr12-3575 chr12 29784089 29784299 + 3.65 0.000 promoter-TSS (NM_001193451) promoter-TSS (NM_001193451) -252 NM_001367875 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr9-7452 chr9 26721153 26721363 + 3.65 0.000 Intergenic L2c|LINE|L2 171544 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr8-5371 chr8 22471041 22471251 + 3.65 0.000 intron (NM_005605, intron 1 of 13) intron (NM_005605, intron 1 of 13) 30176 NM_001243975 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr7-9644 chr7 151132580 151132790 + 3.65 0.000 intron (NM_001350103, intron 11 of 18) intron (NM_001350103, intron 11 of 18) 18047 NM_001308305 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr6-6121 chr6 158308718 158308928 + 3.65 0.000 Intergenic SVA_D|Retroposon|SVA -3642 NM_001007466 56995 Hs.486993 NM_020245 ENSG00000130338 TULP4 TUSP TUB like protein 4 protein-coding KV880763.1-1 KV880763.1 501312 501522 + 3.65 0.000 NA NA NA NA chr3-9659 chr3 61544643 61544853 + 3.65 0.000 Intergenic AluSx|SINE|Alu -16823 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr2-12319 chr2 47569939 47570149 + 3.65 0.000 exon (NM_022055, exon 1 of 2) exon (NM_022055, exon 1 of 2) 287 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr12-4883 chr12 64263179 64263389 + 3.65 0.000 Intergenic AluSq2|SINE|Alu -40988 NM_001300940 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr11-9215 chr11 38676548 38676758 + 3.65 0.000 Intergenic Intergenic 27795 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chrX-3390 chrX 2794376 2794586 + 3.65 0.000 intron (NM_001141920, intron 5 of 9) intron (NM_001141920, intron 5 of 9) -34341 NM_001184703 8908 Hs.567381 NM_003918 ENSG00000056998 GYG2 GN-2|GN2 glycogenin 2 protein-coding chr7-8541 chr7 55736472 55736682 + 3.65 0.000 Intergenic AluSq|SINE|Alu -32010 NR_003949 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr6-4109 chr6 152271893 152272103 + 3.65 0.000 intron (NM_182961, intron 98 of 145) intron (NM_182961, intron 98 of 145) -86620 NM_001347701 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr4-5479 chr4 70952816 70953026 + 3.65 0.000 intron (NM_001244766, intron 2 of 6) intron (NM_001244766, intron 2 of 6) -40728 NM_000788 1633 Hs.709 NM_000788 ENSG00000156136 DCK - deoxycytidine kinase protein-coding chr5-6736 chr5 76550929 76551139 + 3.65 0.000 intron (NM_001285460, intron 1 of 34) SVA_B|Retroposon|SVA 3625 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr5-8592 chr5 138167041 138167251 + 3.65 0.000 intron (NM_001300961, intron 9 of 20) AluSx1|SINE|Alu 11484 NM_006696 10902 Hs.519337 NM_006696 ENSG00000112983 BRD8 SMAP|SMAP2|p120 bromodomain containing 8 protein-coding chrX-3344 chrX 132863390 132863600 + 3.65 0.000 intron (NM_001077188, intron 3 of 5) AluJr|SINE|Alu 97875 NM_147175 90161 Hs.385956 NM_147175 ENSG00000171004 HS6ST2 MRXSPM heparan sulfate 6-O-sulfotransferase 2 protein-coding chr22-1992 chr22 23448800 23449010 + 3.65 0.000 Intergenic Intergenic 15341 NR_110538 101929374 Hs.616963 NR_110538 ENSG00000234928 LINC01659 - long intergenic non-protein coding RNA 1659 ncRNA chr4-5465 chr4 49648597 49648807 + 3.65 0.000 Intergenic (GAATG)n|Satellite|Satellite 662060 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr6-6475 chr6 111044601 111044811 + 3.65 0.000 Intergenic AluSx|SINE|Alu 2848 NR_002932 442245 Hs.551627 NR_002932 GSTM2P1 - glutathione S-transferase mu 2 pseudogene 1 pseudo chr12-7915 chr12 108394658 108394868 + 3.65 0.000 Intergenic Intergenic -55452 NM_004072 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chrX-4240 chrX 38905037 38905247 + 3.65 0.000 Intergenic Intergenic -101259 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr20-3362 chr20 32737695 32737905 + 3.65 0.000 intron (NM_053041, intron 1 of 8) AluJr|SINE|Alu 6208 NM_001099339 149951 Hs.408427 NM_053041 ENSG00000149600 COMMD7 C20orf92|dJ1085F17.3 COMM domain containing 7 protein-coding chr15-3578 chr15 44302053 44302263 + 3.65 0.000 intron (NR_157849, intron 1 of 9) AluSz6|SINE|Alu 13439 NR_157849 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chr9-7342 chr9 14793625 14793835 + 3.65 0.000 intron (NR_163238, intron 22 of 30) intron (NR_163238, intron 22 of 30) -13299 NM_001370061 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr12-6361 chr12 62420478 62420688 + 3.65 0.000 Intergenic L1PB1|LINE|L1 -46243 NM_001278469 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr16-4984 chr16 6134560 6134770 + 3.65 0.000 intron (NM_018723, intron 1 of 15) intron (NM_018723, intron 1 of 15) 114962 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr13-4272 chr13 97889720 97889930 + 3.65 0.000 Intergenic L2c|LINE|L2 -63850 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr2-7377 chr2 4170294 4170504 + 3.65 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 196238 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr17-8264 chr17 67014857 67015067 + 3.65 0.000 intron (NM_014405, intron 1 of 3) AluSz|SINE|Alu -29592 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr12-5361 chr12 118646382 118646592 + 3.65 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 115192 NR_134998 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA chr6-2528 chr6 4990544 4990754 + 3.65 0.000 Intergenic AluJr|SINE|Alu -13167 NR_126015 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr3-9051 chr3 23988294 23988504 + 3.65 0.000 Intergenic AluSz|SINE|Alu 42278 NM_001145425 9975 Hs.37288 NM_005126 ENSG00000174738 NR1D2 BD73|EAR-1R|REVERBB|REVERBbeta|RVR nuclear receptor subfamily 1 group D member 2 protein-coding chr16-5061 chr16 70059472 70059682 + 3.65 0.000 intron (NR_003610, intron 1 of 25) intron (NR_003610, intron 1 of 25) 6371 NR_003610 283970 Hs.513695 NM_199134 ENSG00000196696 PDXDC2P-NPIPB14P - nuclear pore complex-interacting protein pseudo chr7-7374 chr7 66087631 66087841 + 3.65 0.000 exon (NM_001024944, exon 9 of 15) exon (NM_001024944, exon 9 of 15) 11917 NM_001024943 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr12-7025 chr12 33743621 33743831 + 3.65 0.000 Intergenic AluSz|SINE|Alu -278770 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr9-8372 chr9 117900019 117900229 + 3.65 0.000 Intergenic (TTCC)n|Simple_repeat|Simple_repeat 195721 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr12-7219 chr12 50458566 50458776 + 3.65 0.000 intron (NM_001170808, intron 10 of 14) intron (NM_001170808, intron 10 of 14) 2100 NR_132753 106633800 NR_132753 SNORD133 ZL142|ZL42|ggn68 small nucleolar RNA, C/D box 133 snoRNA chr19-5880 chr19 46000724 46000934 + 3.65 0.000 intron (NM_001267723, intron 1 of 13) intron (NM_001267723, intron 1 of 13) 5362 NM_001267723 729440 Hs.515479 NM_001080402 ENSG00000104983 CCDC61 - coiled-coil domain containing 61 protein-coding chr12-7447 chr12 62692891 62693101 + 3.65 0.000 intron (NM_020700, intron 7 of 9) intron (NM_020700, intron 7 of 9) 89310 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr6-5861 chr6 36535780 36535990 + 3.65 0.000 intron (NM_007271, intron 2 of 13) AluSc|SINE|Alu 11594 NM_001305102 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr2-11948 chr2 26228734 26228944 + 3.65 0.000 intron (NM_000182, intron 7 of 19) AluJr|SINE|Alu 15793 NM_000182 3030 Hs.516032 NM_000182 ENSG00000084754 HADHA ECHA|GBP|HADH|LCEH|LCHAD|MTPA|TP-ALPHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha protein-coding chr17-8094 chr17 55731605 55731815 + 3.65 0.000 5' UTR (NM_001099640, exon 1 of 4) 5' UTR (NM_001099640, exon 1 of 4) 371 NM_001099640 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr3-8159 chr3 32922591 32922801 + 3.65 0.000 Intergenic Intergenic -28948 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr11-7594 chr11 41492550 41492760 + 3.65 0.000 Intergenic AluSz|SINE|Alu -33003 NM_001258419 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr1-7869 chr1 103847877 103848087 + 3.65 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 98141 NM_001008218 277 Hs.599274 NM_001008218 ENSG00000174876 AMY1B AMY1 amylase alpha 1B (salivary) protein-coding chr13-4113 chr13 80157614 80157824 + 3.65 0.000 Intergenic MamRTE1|LINE|RTE-BovB 146642 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr7-7474 chr7 95296793 95297003 + 3.65 0.000 TTS (NM_001166162) TTS (NM_001166162) 27634 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr4-7848 chr4 102361206 102361416 + 3.65 0.000 Intergenic L2c|LINE|L2 -15829 NM_001135146 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding chrX-2595 chrX 105260562 105260772 + 3.65 0.000 intron (NM_017416, intron 4 of 10) L1PA14|LINE|L1 -39974 NM_031274 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr10-8475 chr10 88741076 88741286 + 3.65 0.000 intron (NM_001080518, intron 7 of 8) MIR|SINE|MIR 16637 NM_001080518 643414 Hs.632092 NM_001080518 ENSG00000204021 LIPK LIPL2|bA186O14.2 lipase family member K protein-coding chr2-9829 chr2 152606440 152606650 + 3.65 0.000 intron (NM_052905, intron 9 of 25) AluJo|SINE|Alu 110916 NM_001365598 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding KI270856.1-2 KI270856.1 1838 2048 + 3.65 0.000 NA NA NA NA chr1-13625 chr1 9916420 9916630 + 3.65 0.000 Intergenic Intergenic -6256 NM_020248 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr1-11945 chr1 65959841 65960051 + 3.65 0.000 intron (NM_002600, intron 3 of 16) AluJo|SINE|Alu -32670 NM_001037340 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr7-9571 chr7 145422136 145422346 + 3.65 0.000 Intergenic MER63A|DNA|hAT-Blackjack -586188 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr12-8306 chr12 128687146 128687356 + 3.65 0.000 intron (NM_001136103, intron 5 of 8) L2a|LINE|L2 136707 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr1-12023 chr1 104350419 104350629 + 3.65 0.000 Intergenic AluJr|SINE|Alu 277501 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo chr11-7651 chr11 63904441 63904651 + 3.65 0.000 intron (NM_017490, intron 15 of 17) intron (NM_017490, intron 15 of 17) 12618 NM_173587 283248 Hs.98788 NM_173587 ENSG00000167771 RCOR2 - REST corepressor 2 protein-coding chr11-9404 chr11 58059595 58059805 + 3.65 0.000 intron (NM_001005212, intron 2 of 2) AluSz|SINE|Alu 28747 NM_001005186 219952 Hs.690432 NM_001005186 ENSG00000279051 OR6Q1 OR11-226 olfactory receptor family 6 subfamily Q member 1 (gene/pseudogene) protein-coding chr13-4245 chr13 96598478 96598688 + 3.65 0.000 intron (NM_153456, intron 1 of 1) L1PB3|LINE|L1 171354 NR_039723 100616137 NR_039723 ENSG00000283487 MIR4501 - microRNA 4501 ncRNA chr7-8563 chr7 58089295 58089505 + 3.65 0.000 Intergenic Intergenic 639223 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr6-6849 chr6 8616015 8616225 + 3.65 0.000 intron (NR_038980, intron 3 of 4) L1PA7|LINE|L1 -36089 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr18-2638 chr18 41384239 41384449 + 3.65 0.000 Intergenic Intergenic 136333 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr8-5204 chr8 112221476 112221686 + 3.65 0.000 Intergenic L1PA7|LINE|L1 -421912 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr21-623 chr21 39889184 39889394 + 3.65 0.000 intron (NM_006198, intron 1 of 2) intron (NM_006198, intron 1 of 2) 21851 NM_006198 5121 Hs.80296 NM_006198 ENSG00000183036 PCP4 PEP-19 Purkinje cell protein 4 protein-coding chr15-4201 chr15 25449754 25449964 + 3.65 0.000 Intergenic MER77|LTR|ERVL -10803 NM_000462 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr21-1751 chr21 35095785 35095995 + 3.65 0.000 Intergenic L2c|LINE|L2 -46592 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr8-4916 chr8 97752772 97752982 + 3.65 0.000 Intergenic Intergenic -22911 NM_018407 55353 Hs.492314 NM_018407 ENSG00000104341 LAPTM4B LAPTM4beta|LC27 lysosomal protein transmembrane 4 beta protein-coding chr6-7171 chr6 37647163 37647373 + 3.65 0.000 exon (NM_153487, exon 10 of 17) exon (NM_153487, exon 10 of 17) 50615 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr5-8531 chr5 134710814 134711024 + 3.65 0.000 intron (NM_021982, intron 18 of 22) AluSz|SINE|Alu -27629 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr3-10846 chr3 166188070 166188280 + 3.53 0.000 Intergenic L1PA11|LINE|L1 -350752 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding chr6-7664 chr6 84193143 84193353 + 3.53 0.000 intron (NM_001286206, intron 11 of 26) intron (NM_001286206, intron 11 of 26) 34395 NM_014895 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding chr12-6045 chr12 111957382 111957592 + 3.53 0.000 intron (NM_138341, intron 3 of 9) SVA_B|Retroposon|SVA 55678 NM_001193531 89894 Hs.506815 NM_138341 ENSG00000198270 TMEM116 - transmembrane protein 116 protein-coding chr4-5443 chr4 23142707 23142917 + 3.53 0.000 Intergenic Intergenic 428723 NR_102357 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr10-6417 chr10 14235153 14235363 + 3.53 0.000 intron (NR_134578, intron 2 of 3) AluY|SINE|Alu 95626 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr10-6195 chr10 28339001 28339211 + 3.53 0.000 Intergenic AluJo|SINE|Alu -36042 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr9-7825 chr9 82437599 82437809 + 3.53 0.000 Intergenic AluJb|SINE|Alu 448932 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr21-615 chr21 35592962 35593172 + 3.53 0.000 Intergenic MIRb|SINE|MIR -12303 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr4-7404 chr4 64228746 64228956 + 3.53 0.000 Intergenic MER52-int|LTR|ERV1 180599 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr5-7805 chr5 65947970 65948180 + 3.53 0.000 intron (NM_001253697, intron 1 of 25) L4_C_Mam|LINE|RTE-X -2502 NR_028474 100303749 Hs.608060 NR_028474 LOC100303749 - LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene pseudo KI270880.1-2 KI270880.1 37443 37653 + 3.53 0.000 NA NA NA NA chr12-5999 chr12 100322760 100322970 + 3.53 0.000 intron (NM_017988, intron 10 of 17) AluSq|SINE|Alu -34209 NM_139319 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr6-3421 chr6 110607956 110608166 + 3.53 0.000 Intergenic AluSx|SINE|Alu -131448 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr7-9312 chr7 128259215 128259425 + 3.53 0.000 Intergenic Intergenic 18042 NM_000230 3952 Hs.194236 NM_000230 ENSG00000174697 LEP LEPD|OB|OBS leptin protein-coding chr5-5955 chr5 101881499 101881709 + 3.53 0.000 Intergenic AluSc|SINE|Alu 414680 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr3-11024 chr3 181713084 181713294 + 3.53 0.000 exon (NM_003106, exon 1 of 1) exon (NM_003106, exon 1 of 1) 1264 NM_003106 6657 Hs.518438 NM_003106 ENSG00000181449 SOX2 ANOP3|MCOPS3 SRY-box transcription factor 2 protein-coding chrX-3181 chrX 39996342 39996552 + 3.53 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 101019 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr5-6523 chr5 5250679 5250889 + 3.53 0.000 intron (NM_139056, intron 17 of 22) intron (NM_139056, intron 17 of 22) 110454 NM_139056 170690 Hs.661915 NM_139056 ENSG00000145536 ADAMTS16 ADAMTS16s ADAM metallopeptidase with thrombospondin type 1 motif 16 protein-coding chr6-7137 chr6 35862898 35863108 + 3.53 0.000 intron (NM_003137, intron 12 of 15) AluJo|SINE|Alu 57651 NM_182548 222662 Hs.367947 NM_182548 ENSG00000197753 LHFPL5 DFNB67|TMHS|dJ510O8.8 LHFPL tetraspan subfamily member 5 protein-coding chr6-8168 chr6 132115849 132116059 + 3.53 0.000 promoter-TSS (NR_039673) promoter-TSS (NR_039673) -691 NR_039673 100616191 NR_039673 ENSG00000265669 MIR548AJ1 - microRNA 548aj-1 ncRNA chrX-4406 chrX 53135695 53135905 + 3.53 0.000 intron (NR_145973, intron 3 of 3) intron (NR_145973, intron 3 of 3) 41643 NR_145980 102723508 Hs.633244 NR_110456 KANTR LINC01155|Spasm KDM5C adjacent transcript ncRNA chr8-2387 chr8 51159471 51159681 + 3.53 0.000 Intergenic SVA_D|Retroposon|SVA 649869 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr1-15494 chr1 155832857 155833067 + 3.53 0.000 intron (NM_032292, intron 2 of 20) (A)n|Simple_repeat|Simple_repeat 24252 NM_032292 54856 Hs.656361 NM_032292 ENSG00000116580 GON4L GON-4|GON4|YARP gon-4 like protein-coding KI270832.1-6 KI270832.1 98502 98712 + 3.53 0.000 NA NA NA NA chr2-11431 chr2 221959902 221960112 + 3.53 0.000 Intergenic L2a|LINE|L2 -338140 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr4-6440 chr4 136470519 136470729 + 3.53 0.000 Intergenic L1MA4|LINE|L1 -556944 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr11-9627 chr11 66169405 66169615 + 3.53 0.000 intron (NM_018026, intron 1 of 23) AluSx3|SINE|Alu -87784 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr1-11955 chr1 69149897 69150107 + 3.53 0.000 intron (NR_146608, intron 3 of 4) AluJb|SINE|Alu 94104 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr8-3054 chr8 3268123 3268333 + 3.53 0.000 intron (NM_033225, intron 26 of 69) intron (NM_033225, intron 26 of 69) -539777 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr6-7388 chr6 50368996 50369206 + 3.53 0.000 Intergenic MER21C|LTR|ERVL -319172 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding chr6-8112 chr6 126742917 126743127 + 3.53 0.000 Intergenic Intergenic 258391 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr1-11280 chr1 7888289 7888499 + 3.53 0.000 Intergenic Intergenic -34903 NM_021995 10911 Hs.715862 NM_006786 ENSG00000049247 UTS2 PRO1068|U-II|UCN2|UII urotensin 2 protein-coding chr14-2731 chr14 97084824 97085034 + 3.53 0.000 Intergenic AluSp|SINE|Alu -69928 NR_146554 105370648 NR_146554 ENSG00000259110 LINC02304 - long intergenic non-protein coding RNA 2304 ncRNA chr21-1825 chr21 40332090 40332300 + 3.53 0.000 intron (NR_073202, intron 8 of 32) intron (NR_073202, intron 8 of 32) -50888 NR_038898 100506492 Hs.667053 NR_038896 ENSG00000235123 DSCAM-AS1 M41 DSCAM antisense RNA 1 ncRNA chr6-5625 chr6 53760930 53761140 + 3.53 0.000 Intergenic AluSx1|SINE|Alu -33970 NM_018214 55227 Hs.606493 NM_018214 ENSG00000137269 LRRC1 LANO|dJ523E19.1 leucine rich repeat containing 1 protein-coding chr2-10512 chr2 230026544 230026754 + 3.53 0.000 Intergenic AluSx1|SINE|Alu 42275 NM_152527 151473 Hs.504317 NM_152527 ENSG00000163053 SLC16A14 MCT14 solute carrier family 16 member 14 protein-coding chr7-9478 chr7 135723361 135723571 + 3.53 0.000 intron (NM_001318192, intron 1 of 15) intron (NM_001318192, intron 1 of 15) 4720 NM_012450 26266 Hs.490241 NM_012450 ENSG00000164707 SLC13A4 NAS2|SUT-1|SUT1 solute carrier family 13 member 4 protein-coding chr18-2822 chr18 5890375 5890585 + 3.53 0.000 exon (NM_001080209, exon 3 of 3) exon (NM_001080209, exon 3 of 3) 5474 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr16-5301 chr16 68415716 68415926 + 3.53 0.000 intron (NM_018667, intron 1 of 8) (T)n|Simple_repeat|Simple_repeat 32687 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr12-6731 chr12 5673674 5673884 + 3.53 0.000 intron (NM_001278596, intron 15 of 25) intron (NM_001278596, intron 15 of 25) 179647 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr6-6368 chr6 69065529 69065739 + 3.53 0.000 intron (NM_001704, intron 16 of 31) intron (NM_001704, intron 16 of 31) 430352 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr7-8489 chr7 50977123 50977333 + 3.53 0.000 Intergenic MER4A1|LTR|ERV1 -183775 NM_001371008 chr22-2085 chr22 19330278 19330488 + 3.53 0.000 TTS (NM_003325) TTS (NM_003325) -38664 NM_007098 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chrX-3101 chrX 145853445 145853655 + 3.53 0.000 Intergenic Intergenic 32202 NM_001144006 84631 Hs.106688 NM_032539 ENSG00000185985 SLITRK2 CXorf1|CXorf2|SLITL1|TMEM257 SLIT and NTRK like family member 2 protein-coding chrX-5296 chrX 142333548 142333758 + 3.53 0.000 Intergenic L1PA16|LINE|L1 -128363 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr7-8468 chr7 48529046 48529256 + 3.53 0.000 intron (NM_152701, intron 55 of 61) intron (NM_152701, intron 55 of 61) 357693 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr18-3029 chr18 26939975 26940185 + 3.53 0.000 intron (NM_001256316, intron 4 of 4) intron (NM_001256316, intron 4 of 4) -74277 NM_001317384 361 Hs.315369 NM_001650 ENSG00000171885 AQP4 MIWC|WCH4 aquaporin 4 protein-coding chr2-14537 chr2 229859354 229859564 + 3.53 0.000 exon (NM_001284215, exon 3 of 41) exon (NM_001284215, exon 3 of 41) 62220 NM_001348334 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr1-12659 chr1 44252067 44252277 + 3.53 0.000 TTS (NR_132966) TTS (NR_132966) 387 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr1-14740 chr1 67241017 67241227 + 3.53 0.000 intron (NM_144701, intron 9 of 10) MER57A1|LTR|ERV1 -66242 NM_001258216 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr5-8443 chr5 129061530 129061740 + 3.53 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -33114 NM_016048 51015 Hs.483296 NM_016048 ENSG00000066583 ISOC1 CGI-111 isochorismatase domain containing 1 protein-coding chr17-7498 chr17 16838019 16838229 + 3.53 0.000 Intergenic Intergenic -5291 NR_029392 400578 Hs.723586 NR_029392 KRT16P2 - keratin 16 pseudogene 2 pseudo chr19-6356 chr19 11462007 11462217 + 3.53 0.000 intron (NM_032281, intron 3 of 6) AluY|SINE|Alu 18934 NM_001420 1995 Hs.1701 NM_001420 ENSG00000196361 ELAVL3 HUC|HUCL|PLE21 ELAV like RNA binding protein 3 protein-coding chr22-3101 chr22 49037527 49037737 + 3.53 0.000 Intergenic Intergenic 170862 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chrX-3595 chrX 80246856 80247066 + 3.53 0.000 intron (NR_110646, intron 5 of 5) AluSx1|SINE|Alu 88357 NR_110646 101060146 Hs.546064 NR_110646 ENSG00000278530 CHMP1B2P - charged multivesicular body protein 1B2, pseudogene pseudo chr14-2775 chr14 19845486 19845696 + 3.53 0.000 Intergenic Intergenic 23582 NR_145507 283617 NM_001348266 ENSG00000176290 OR4K3 OR14-10|OR4K3P olfactory receptor family 4 subfamily K member 3 (gene/pseudogene) protein-coding chr7-9637 chr7 151019555 151019765 + 3.53 0.000 intron (NR_133652, intron 5 of 16) intron (NR_133652, intron 5 of 16) 4839 NR_133652 285973 Hs.707300 NM_173681 ENSG00000181652 ATG9B APG9L2|NOS3AS|SONE autophagy related 9B protein-coding chr14-3764 chr14 51726318 51726528 + 3.53 0.000 intron (NM_001042481, intron 14 of 14) intron (NM_001042481, intron 14 of 14) 9140 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr8-3060 chr8 16166072 16166282 + 3.53 0.000 intron (NM_002445, intron 4 of 8) AluSg|SINE|Alu 20095 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr18-3040 chr18 27901290 27901500 + 3.53 0.000 Intergenic Intergenic 135246 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr3-7370 chr3 57196844 57197054 + 3.53 0.000 TTS (NM_003865) TTS (NM_003865) 3029 NM_003865 8820 Hs.171980 NM_003865 ENSG00000163666 HESX1 ANF|CPHD5|RPX HESX homeobox 1 protein-coding chr8-7066 chr8 116112786 116112996 + 3.53 0.000 intron (NR_046215, intron 7 of 13) intron (NR_046215, intron 7 of 13) 212168 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr2-10937 chr2 77740340 77740550 + 3.53 0.000 Intergenic AluJr|SINE|Alu -175489 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA chr5-8431 chr5 128252914 128253124 + 3.53 0.000 Intergenic Intergenic 169253 NM_001046 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr13-3048 chr13 30940224 30940434 + 3.53 0.000 intron (NM_001353391, intron 2 of 5) AluY|SINE|Alu 7673 NM_001353388 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr19-6686 chr19 35363199 35363409 + 3.53 0.000 Intergenic Intergenic 4844 NM_005304 2865 Hs.248055 NM_005304 ENSG00000185897 FFAR3 FFA3R|GPR41|GPR42 free fatty acid receptor 3 protein-coding chr9-4222 chr9 73119718 73119928 + 3.53 0.000 Intergenic AluY|SINE|Alu -32042 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr8-5770 chr8 142096644 142096854 + 3.53 0.000 Intergenic Intergenic -79590 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr5-8349 chr5 119760254 119760464 + 3.53 0.000 Intergenic Intergenic 130800 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr11-8966 chr11 20388696 20388906 + 3.53 0.000 intron (NM_005788, intron 2 of 15) intron (NM_005788, intron 2 of 15) 1085 NM_005788 10196 Hs.152337 NM_005788 ENSG00000185238 PRMT3 HRMT1L3 protein arginine methyltransferase 3 protein-coding chr4-4783 chr4 101628008 101628218 + 3.53 0.000 Intergenic L1PB2|LINE|L1 -162494 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr16-5604 chr16 56903136 56903346 + 3.53 0.000 intron (NM_001126108, intron 24 of 25) intron (NM_001126108, intron 24 of 25) -1023 NR_106923 102466752 NR_106923 ENSG00000283471 MIR6863 hsa-mir-6863 microRNA 6863 ncRNA chr12-2925 chr12 67910582 67910792 + 3.53 0.000 Intergenic Intergenic -18548 NR_120456 101927922 Hs.450769 NR_120456 ENSG00000255772 LINC01479 HRAT39 long intergenic non-protein coding RNA 1479 ncRNA chr20-2214 chr20 60721820 60722030 + 3.53 0.000 Intergenic Intergenic 157363 NR_039653 100616440 NR_039653 ENSG00000265617 MIR548AG2 - microRNA 548ag-2 ncRNA chr12-6722 chr12 5507211 5507421 + 3.53 0.000 Intergenic Intergenic 13184 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr10-8775 chr10 104978801 104979011 + 3.53 0.000 intron (NM_014978, intron 4 of 26) L2c|LINE|L2 -312690 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA KI270899.1-1 KI270899.1 13252 13462 + 3.53 0.000 NA NA NA NA chr6-3674 chr6 150819027 150819237 + 3.53 0.000 intron (NM_001329803, intron 9 of 13) intron (NM_001329803, intron 9 of 13) -46547 NR_146719 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr1-12645 chr1 42894020 42894230 + 3.53 0.000 Intergenic L1PB1|LINE|L1 36503 NR_104171 339539 Hs.434301 NR_104171 LOC339539 - uncharacterized LOC339539 ncRNA chr10-9016 chr10 122201280 122201490 + 3.53 0.000 intron (NM_206862, intron 8 of 22) intron (NM_206862, intron 8 of 22) 37755 NM_006997 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr17-6489 chr17 21574329 21574539 + 3.53 0.000 Intergenic SST1|Satellite|centr -22756 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr11-8499 chr11 121235453 121235663 + 3.53 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -57213 NM_006918 6309 Hs.287749 NM_006918 ENSG00000109929 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding chr6-8014 chr6 117279658 117279868 + 3.53 0.000 Intergenic Intergenic 14205 NM_182645 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr2-10880 chr2 65752405 65752615 + 3.53 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -319911 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr1-9106 chr1 17039343 17039553 + 3.53 0.000 intron (NM_003000, intron 2 of 7) AluJo|SINE|Alu 14722 NM_003000 6390 Hs.465924 NM_003000 ENSG00000117118 SDHB CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP succinate dehydrogenase complex iron sulfur subunit B protein-coding chr5-7410 chr5 26717412 26717622 + 3.53 0.000 Intergenic Intergenic 321069 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr16-5812 chr16 243914 244124 + 3.53 0.000 intron (NM_032039, intron 1 of 12) AluY|SINE|Alu 9198 NM_001284497 83986 Hs.513225 NM_032039 ENSG00000167930 FAM234A C16orf9|ITFG3|gs19 family with sequence similarity 234 member A protein-coding chr16-6321 chr16 49019447 49019657 + 3.53 0.000 Intergenic Intergenic 262286 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding chr19-5604 chr19 3064293 3064503 + 3.53 0.000 intron (NR_031672, intron 1 of 2).3 intron (NR_031672, intron 1 of 2).3 316 NR_031672 100302233 NR_031672 ENSG00000221641 MIR1268A MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a microRNA 1268a ncRNA chr4-8140 chr4 127612621 127612831 + 3.53 0.000 Intergenic Intergenic -20231 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr7-7831 chr7 4217142 4217352 + 3.53 0.000 intron (NM_001079653, intron 12 of 19) intron (NM_001079653, intron 12 of 19) -82410 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr16-4464 chr16 56191313 56191523 + 3.53 0.000 promoter-TSS (NM_020988) promoter-TSS (NM_020988) -71 NM_138736 2775 Hs.644524 NM_020988 ENSG00000087258 GNAO1 EIEE17|G-ALPHA-o|GNAO|HLA-DQB1|NEDIM G protein subunit alpha o1 protein-coding chr3-7286 chr3 5657808 5658018 + 3.53 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -407658 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr2-13406 chr2 140798494 140798704 + 3.53 0.000 intron (NM_018557, intron 32 of 90) MER20|DNA|hAT-Charlie -211914 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr20-3190 chr20 47252141 47252351 + 3.53 0.000 intron (NM_001281784, intron 11 of 20) AluSx1|SINE|Alu -66256 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr8-6306 chr8 43233373 43233583 + 3.53 0.000 Intergenic Intergenic -58964 NM_001005365 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr1-13502 chr1 4655982 4656192 + 3.53 0.000 intron (NM_018836, intron 1 of 5) CpG 1478 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr2-13843 chr2 176919489 176919699 + 3.53 0.000 Intergenic MIR|SINE|MIR 281840 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr8-5177 chr8 100743764 100743974 + 3.53 0.000 Intergenic AluSz6|SINE|Alu -21781 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr2-9029 chr2 197922841 197923051 + 3.53 0.000 intron (NM_006226, intron 1 of 5) SVA_F|Retroposon|SVA 118353 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr7-5474 chr7 41606193 41606403 + 3.53 0.000 Intergenic L1ME1|LINE|L1 -87621 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr19-6772 chr19 40673345 40673555 + 3.53 0.000 exon (NM_001289980, exon 7 of 9) exon (NM_001289980, exon 7 of 9) 16714 NM_001289980 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr2-11923 chr2 25071725 25071935 + 3.53 0.000 intron (NM_001319099, intron 1 of 22) intron (NM_001319099, intron 1 of 22) 29367 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr17-7436 chr17 11347963 11348173 + 3.53 0.000 intron (NM_001173461, intron 2 of 3) intron (NM_001173461, intron 2 of 3) 106645 NM_001173461 388336 Hs.592124 NM_175903 ENSG00000188803 SHISA6 - shisa family member 6 protein-coding chr1-15960 chr1 191853520 191853730 + 3.53 0.000 Intergenic L2a|LINE|L2 -304837 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding chr4-5893 chr4 132473453 132473663 + 3.53 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -117531 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr9-7273 chr9 6443333 6443543 + 3.53 0.000 intron (NM_152896, intron 3 of 15) MIRb|SINE|MIR 30239 NM_152896 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr3-7452 chr3 128857773 128857983 + 3.53 0.000 Intergenic HERV3-int|LTR|ERV1 11070 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr7-9740 chr7 157676676 157676886 + 3.53 0.000 intron (NM_130843, intron 12 of 21) intron (NM_130843, intron 12 of 21) -102359 NR_029689 406945 NR_029689 ENSG00000207960 MIR153-2 MIRN153-2|mir-153-2 microRNA 153-2 ncRNA chrX-5390 chrX 151541735 151541945 + 3.53 0.000 Intergenic AluJr|SINE|Alu -21835 NM_173493 139135 Hs.160594 NM_173493 ENSG00000166049 PASD1 CT63|CT64|OXTES1 PAS domain containing repressor 1 protein-coding chr1-12147 chr1 176441086 176441296 + 3.53 0.000 Intergenic MIR3|SINE|MIR -21984 NM_020318 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr11-10115 chr11 87598725 87598935 + 3.53 0.000 Intergenic Intergenic 120581 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr11-7577 chr11 32636901 32637111 + 3.53 0.000 intron (NM_001008391, intron 13 of 17) L2c|LINE|L2 53175 NM_006360 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr8-6732 chr8 87252690 87252900 + 3.53 0.000 intron (NM_173538, intron 6 of 10) L2c|LINE|L2 386380 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr18-3424 chr18 63753792 63754002 + 3.53 0.000 intron (NM_001040147, intron 1 of 7) intron (NM_001040147, intron 1 of 7) 850 NM_001040147 8710 Hs.138202 NM_003784 ENSG00000166396 SERPINB7 MEGSIN|PPKN|TP55 serpin family B member 7 protein-coding chr2-14437 chr2 222556425 222556635 + 3.53 0.000 intron (NM_152386, intron 4 of 4) intron (NM_152386, intron 4 of 4) 99562 NM_005687 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chr7-8272 chr7 38196355 38196565 + 3.53 0.000 intron (NM_001363344, intron 2 of 8) MamRep605|LTR?|LTR? 18215 NM_001363344 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr2-13830 chr2 176171678 176171888 + 3.53 0.000 exon (NM_006898, exon 4 of 4) exon (NM_006898, exon 4 of 4) 6346 NR_110464 401022 Hs.98661 NR_033979 ENSG00000224189 HAGLR HOXD-AS1|MIR7704HG|Mdgt HOXD antisense growth-associated long non-coding RNA ncRNA chr15-5148 chr15 91038427 91038637 + 3.53 0.000 Intergenic Intergenic 15910 NR_110104 101926911 Hs.459366 NR_110104 ENSG00000214432 VPS33B-DT - VPS33B divergent transcript ncRNA chr3-7206 chr3 191197353 191197563 + 3.53 0.000 Intergenic Intergenic -1783 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding chr14-3885 chr14 92631554 92631764 + 3.53 0.000 intron (NM_024832, intron 4 of 9) AluSz|SINE|Alu 55425 NM_001319987 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr1-11453 chr1 85012957 85013167 + 3.53 0.000 Intergenic AluJb|SINE|Alu -15949 NM_153259 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr20-3304 chr20 12062261 12062471 + 3.53 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 144473 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr13-2651 chr13 80232760 80232970 + 3.53 0.000 Intergenic AluSc|SINE|Alu 106794 NM_001318538 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr7-8960 chr7 98816534 98816744 + 3.53 0.000 Intergenic Intergenic 53375 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr10-8067 chr10 66063989 66064199 + 3.53 0.000 intron (NM_001127384, intron 15 of 17) THE1D|LTR|ERVL-MaLR 492669 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr17-4492 chr17 67613779 67613989 + 3.53 0.000 intron (NM_181671, intron 5 of 9) AluJb|SINE|Alu -103949 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr6-3891 chr6 63185399 63185609 + 3.53 0.000 Intergenic Intergenic 134473 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr16-6525 chr16 62726583 62726793 + 3.53 0.000 Intergenic Intergenic -690250 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr2-8055 chr2 72661271 72661481 + 3.53 0.000 intron (NR_135774, intron 6 of 19) L1ME1|LINE|L1 164657 NM_001321731 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr10-6476 chr10 42856034 42856244 + 3.53 0.000 Intergenic MER77|LTR|ERVL -15382 NR_134479 101929445 Hs.376403 NR_134479 ENSG00000234944 LINC02623 - long intergenic non-protein coding RNA 2623 ncRNA chr5-7307 chr5 14967368 14967578 + 3.53 0.000 Intergenic Intergenic -95695 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr14-3092 chr14 64358897 64359107 + 3.53 0.000 Intergenic AluSx1|SINE|Alu -11391 NR_033777 441687 Hs.685242 NR_033777 TEX21P - testis expressed 21, pseudogene pseudo chr5-7192 chr5 6562045 6562255 + 3.53 0.000 Intergenic L1MB1|LINE|L1 -19986 NR_024423 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 SRHC long intergenic non-protein coding RNA 1018 ncRNA chr21-1762 chr21 35965765 35965975 + 3.53 0.000 intron (NR_110418, intron 5 of 5) HERVL-int|LTR|ERVL 38797 NR_110418 101928269 Hs.589909 NR_110418 LOC101928269 - uncharacterized LOC101928269 ncRNA chr9-6589 chr9 125448902 125449112 + 3.53 0.000 intron (NM_001006619, intron 9 of 10) AluSx|SINE|Alu 187181 NM_001354299 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr18-3135 chr18 39185146 39185356 + 3.53 0.000 Intergenic Intergenic 436924 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr8-5428 chr8 34319860 34320070 + 3.53 0.000 Intergenic AluY|SINE|Alu -463956 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA chr17-6238 chr17 20533156 20533366 + 3.53 0.000 Intergenic Intergenic -28763 NR_029393 644945 Hs.572477 NR_029393 ENSG00000214822 KRT16P3 KERSMCR keratin 16 pseudogene 3 pseudo chr4-7328 chr4 56309996 56310206 + 3.53 0.000 intron (NM_020722, intron 5 of 10) intron (NM_020722, intron 5 of 10) 77390 NM_001286668 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr10-7372 chr10 2167156 2167366 + 3.53 0.000 Intergenic AluJb|SINE|Alu -91172 NR_106720 102465944 NR_106720 ENSG00000278069 MIR6072 hsa-mir-6072 microRNA 6072 ncRNA chr3-9551 chr3 53330582 53330792 + 3.53 0.000 intron (NM_001290207, intron 2 of 7) intron (NM_001290207, intron 2 of 7) 2440 NR_145715 109617024 NR_145715 ENSG00000207109 SNORD38C - small nucleolar RNA, C/D box 38C snoRNA chr8-6363 chr8 53126112 53126322 + 3.53 0.000 Intergenic Intergenic 125420 NM_000912 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr6-7260 chr6 42437197 42437407 + 3.53 0.000 intron (NM_001297573, intron 2 of 17) intron (NM_001297573, intron 2 of 17) 14749 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr12-6491 chr12 104057779 104057989 + 3.53 0.000 intron (NM_031302, intron 1 of 11) L1M3f|LINE|L1 6293 NM_001316967 83468 Hs.631650 NM_031302 ENSG00000120820 GLT8D2 - glycosyltransferase 8 domain containing 2 protein-coding chr18-3560 chr18 77478762 77478972 + 3.53 0.000 Intergenic Intergenic 229019 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr10-6927 chr10 51202085 51202295 + 3.53 0.000 intron (NM_001098512, intron 2 of 17) LTR16A1|LTR|ERVL -97383 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr8-6206 chr8 36834296 36834506 + 3.53 0.000 intron (NM_001031836, intron 11 of 26) intron (NM_001031836, intron 11 of 26) 50027 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr17-7093 chr17 69402305 69402515 + 3.53 0.000 Intergenic AluSg4|SINE|Alu -12287 NM_002758 5608 Hs.49329 NM_002758 ENSG00000108984 MAP2K6 MAPKK6|MEK6|MKK6|PRKMK6|SAPKK-3|SAPKK3 mitogen-activated protein kinase kinase 6 protein-coding chr5-5874 chr5 6803085 6803295 + 3.53 0.000 intron (NR_146281, intron 1 of 1) intron (NR_146281, intron 1 of 1) 7310 NR_146281 109729133 Hs.582455 NR_146281 ENSG00000251365 LINC02236 - long intergenic non-protein coding RNA 2236 ncRNA chrX-5190 chrX 134009529 134009739 + 3.53 0.000 Intergenic Intergenic -23988 NM_004484 2719 Hs.644108 NM_004484 ENSG00000147257 GPC3 DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1 glypican 3 protein-coding chr13-2671 chr13 85412406 85412616 + 3.53 0.000 intron (NR_046989, intron 1 of 3) AluSx1|SINE|Alu 48908 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr10-6323 chr10 115693948 115694158 + 3.53 0.000 intron (NM_207303, intron 26 of 28) intron (NM_207303, intron 26 of 28) 500736 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr6-8218 chr6 135750086 135750296 + 3.53 0.000 Intergenic L1MEc|LINE|L1 -101510 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr4-7972 chr4 113171080 113171290 + 3.53 0.000 intron (NM_001354241, intron 2 of 45) intron (NM_001354241, intron 2 of 45) 18903 NR_107049 102465878 NR_107049 ENSG00000275810 MIR8082 hsa-mir-8082 microRNA 8082 ncRNA chrX-3206 chrX 48625689 48625899 + 3.53 0.000 Intergenic AluSx1|SINE|Alu 28302 NM_001347217 64743 Hs.521973 NM_017883 ENSG00000101940 WDR13 MG21 WD repeat domain 13 protein-coding chrX-3881 chrX 5478417 5478627 + 3.53 0.000 Intergenic AluSx|SINE|Alu -747836 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr9-7752 chr9 75926218 75926428 + 3.53 0.000 intron (NR_120409, intron 1 of 19) MER63A|DNA|hAT-Blackjack 35650 NM_006200 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr7-7964 chr7 12519790 12520000 + 3.53 0.000 intron (NR_136263, intron 1 of 3) L1MA4A|LINE|L1 15498 NR_136263 102725191 Hs.602382 NR_136261 ENSG00000226690 LOC102725191 - uncharacterized LOC102725191 ncRNA chr2-10649 chr2 17538974 17539184 + 3.53 0.000 promoter-TSS (NM_001366803) promoter-TSS (NM_001366803) -893 NM_001366803 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr8-5131 chr8 70145521 70145731 + 3.53 0.000 intron (NM_001321703, intron 12 of 22) AluJr4|SINE|Alu -74374 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr17-3724 chr17 19291324 19291534 + 3.53 0.000 intron (NM_014964, intron 4 of 10) AluYk4|SINE|Alu 14832 NR_048576 100874018 Hs.621672 NR_048576 ENSG00000235397 EPN2-AS1 - EPN2 antisense RNA 1 ncRNA chr2-11697 chr2 9381205 9381415 + 3.53 0.000 intron (NM_003887, intron 20 of 27) MIRb|SINE|MIR 41281 NR_134951 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr4-5755 chr4 60126481 60126691 + 3.53 0.000 Intergenic AluSx3|SINE|Alu -796033 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chrX-4266 chrX 40866904 40867114 + 3.53 0.000 Intergenic Intergenic -33813 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo chr2-11909 chr2 24375579 24375789 + 3.53 0.000 Intergenic AluYc|SINE|Alu -15148 NM_001348184 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chrX-4114 chrX 25157836 25158046 + 3.53 0.000 Intergenic Intergenic -141976 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr7-8638 chr7 70466531 70466741 + 3.53 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -665508 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding KI270735.1-3 KI270735.1 2758 2968 + 3.53 0.000 NA NA NA NA chr15-5285 chr15 100781852 100782062 + 3.53 0.000 Intergenic Intergenic -67795 NR_160704 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA chr21-1327 chr21 16070523 16070733 + 3.53 0.000 promoter-TSS (NR_111004) promoter-TSS (NR_111004) 106 NR_027790 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr1-15512 chr1 156433106 156433316 + 3.53 0.000 Intergenic Intergenic -3663 NR_135262 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chrX-2337 chrX 58268476 58268686 + 3.53 0.000 Intergenic GSATX|Satellite|centr -357948 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr14-4931 chr14 74121636 74121846 + 3.53 0.000 intron (NM_001024674, intron 5 of 5) AluSx|SINE|Alu 36788 NM_001024674 91750 Hs.612866 NM_001024674 ENSG00000205659 LIN52 C14orf46|c14_5549 lin-52 DREAM MuvB core complex component protein-coding chr2-6723 chr2 28883910 28884120 + 3.53 0.000 Intergenic AluY|SINE|Alu -10652 NM_015131 23160 Hs.622982 NM_015131 ENSG00000163811 WDR43 NET12|UTP5 WD repeat domain 43 protein-coding chr2-12508 chr2 64230796 64231006 + 3.53 0.000 intron (NR_120420, intron 2 of 4) L2|LINE|L2 2500 NR_120420 100507006 Hs.442789 NR_120420 LOC100507006 - uncharacterized LOC100507006 ncRNA chr3-10269 chr3 124336313 124336523 + 3.53 0.000 intron (NM_001024660, intron 9 of 59) intron (NM_001024660, intron 9 of 59) -37914 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr7-7961 chr7 12368470 12368680 + 3.53 0.000 intron (NM_001135924, intron 12 of 28) L2a|LINE|L2 35290 NM_001135924 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding chrX-4627 chrX 77596971 77597181 + 3.53 0.000 intron (NM_000489, intron 25 of 34) intron (NM_000489, intron 25 of 34) 149687 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr21-488 chr21 8461255 8461465 + 3.53 0.000 Intergenic (TCTC)n|Simple_repeat|Simple_repeat 20214 NR_003287 100008589 NR_003287 RNA28SN5 RN28S1|RNA28S5 RNA, 28S ribosomal N5 rRNA chr20-2357 chr20 15560677 15560887 + 3.53 0.000 intron (NM_001351663, intron 8 of 17) AluSz|SINE|Alu 362532 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr2-12946 chr2 102503013 102503223 + 3.53 0.000 intron (NM_001011552, intron 2 of 11) LTR41B|LTR|ERVL 29892 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding chr7-7021 chr7 130815892 130816102 + 3.53 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 60813 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr14-4485 chr14 36305082 36305292 + 3.53 0.000 intron (NM_001308110, intron 6 of 7) intron (NM_001308110, intron 6 of 7) 15450 NM_001308110 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr7-8572 chr7 65278624 65278834 + 3.53 0.000 Intergenic L1M3a|LINE|L1 -95070 NM_001287532 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr10-6915 chr10 47674171 47674381 + 3.53 0.000 Intergenic AluJo|SINE|Alu -15424 NR_027634 439965 Hs.283521 NR_027634 SHLD2P3 FAM35B2|FAM35DP shieldin complex subunit 2 pseudogene 3 pseudo chr11-8385 chr11 92157841 92158051 + 3.53 0.000 Intergenic SVA_D|Retroposon|SVA -67088 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr6-5658 chr6 89436211 89436421 + 3.53 0.000 intron (NM_001242809, intron 1 of 15) MER119|DNA|hAT-Charlie 3138 NM_014942 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr9-6900 chr9 90616673 90616883 + 3.53 0.000 intron (NM_017594, intron 1 of 1) intron (NM_017594, intron 1 of 1) 26046 NM_017594 54769 Hs.165636 NM_017594 ENSG00000165023 DIRAS2 Di-Ras2 DIRAS family GTPase 2 protein-coding chr16-6260 chr16 30713871 30714081 + 3.53 0.000 intron (NM_006662, intron 16 of 33) AluY|SINE|Alu 3439 NR_002966 677813 Hs.689718 NR_002966 ENSG00000206755 SNORA30 ACA30|SNORA30A small nucleolar RNA, H/ACA box 30 snoRNA chr5-8455 chr5 130652235 130652445 + 3.53 0.000 Intergenic Intergenic 512916 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr10-7700 chr10 29962546 29962756 + 3.53 0.000 Intergenic Intergenic 96935 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr7-4071 chr7 6848070 6848280 + 3.53 0.000 Intergenic SATR1|Satellite|Satellite -21880 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr1-16432 chr1 226503880 226504090 + 3.53 0.000 Intergenic L1P2|LINE|L1 -44779 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr16-5191 chr16 11335648 11335858 + 3.53 0.000 Intergenic SVA_D|Retroposon|SVA 9459 NR_135174 105371083 Hs.737495 NR_135174 ENSG00000263080 LOC105371083 - uncharacterized LOC105371083 ncRNA chr15-4233 chr15 28914269 28914479 + 3.53 0.000 intron (NM_001353792, intron 1 of 13).2 intron (NM_001353792, intron 1 of 13).2 -7263 NM_005503 321 Hs.618112 NM_005503 ENSG00000034053 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta precursor protein binding family A member 2 protein-coding chrX-3933 chrX 9814253 9814463 + 3.53 0.000 intron (NM_001649, intron 1 of 9) HERVL-int|LTR|ERVL 27929 NM_001649 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr15-4148 chr15 87849588 87849798 + 3.53 0.000 Intergenic AluSq2|SINE|Alu 96575 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr11-10334 chr11 110081048 110081258 + 3.53 0.000 Intergenic AluSx1|SINE|Alu -12239 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr3-8863 chr3 10071162 10071372 + 3.53 0.000 intron (NM_001018115, intron 26 of 43) L1MA3|LINE|L1 36988 NM_173472 115795 Hs.190413 NM_173472 ENSG00000163705 FANCD2OS C3orf24 FANCD2 opposite strand protein-coding chr16-4123 chr16 3348999 3349209 + 3.53 0.000 Intergenic MIRc|SINE|MIR -6785 NM_012368 4993 Hs.258574 NM_012368 ENSG00000168158 OR2C1 OLFmf3|OR2C2P olfactory receptor family 2 subfamily C member 1 protein-coding chr1-11055 chr1 224838205 224838415 + 3.53 0.000 Intergenic MLT2B3|LTR|ERVL -91344 NM_144989 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr5-7170 chr5 4729947 4730157 + 3.53 0.000 Intergenic Intergenic -43429 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA chr2-13576 chr2 156412447 156412657 + 3.53 0.000 Intergenic MIR|SINE|MIR -23000 NM_001083112 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr5-7256 chr5 11566919 11567129 + 3.53 0.000 intron (NM_001288717, intron 2 of 20) L1MEc|LINE|L1 21893 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr5-7031 chr5 160682579 160682789 + 3.53 0.000 intron (NM_001366652, intron 5 of 24) intron (NM_001366652, intron 5 of 24) 2707 NM_001366658 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr10-9010 chr10 121917475 121917685 + 3.53 0.000 intron (NM_001288735, intron 1 of 9) HAL1|LINE|L1 10451 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr6-3902 chr6 67387905 67388115 + 3.53 0.000 Intergenic L1M3|LINE|L1 -667341 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr4-8288 chr4 142778996 142779206 + 3.53 0.000 intron (NM_001331040, intron 1 of 25) intron (NM_001331040, intron 1 of 25) 67434 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr9-6346 chr9 13624173 13624383 + 3.53 0.000 Intergenic L1MA9|LINE|L1 -192949 NR_033863 401492 Hs.632651 NR_033863 ENSG00000270547 LINC01235 - long intergenic non-protein coding RNA 1235 ncRNA chr2-13315 chr2 131446099 131446309 + 3.53 0.000 Intergenic L2|LINE|L2 -1310 NR_002826 401010 Hs.452369 NR_002826 NOC2LP2 - NOC2 like nucleolar associated transcriptional repressor pseudogene 2 pseudo chr2-13564 chr2 154748835 154749045 + 3.53 0.000 intron (NM_002239, intron 2 of 2) intron (NM_002239, intron 2 of 2) 50245 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr12-5952 chr12 81437721 81437931 + 3.53 0.000 intron (NM_001220478, intron 3 of 28) intron (NM_001220478, intron 3 of 28) -68412 NM_001220480 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr7-8538 chr7 55546882 55547092 + 3.53 0.000 intron (NM_030796, intron 1 of 4) intron (NM_030796, intron 1 of 4) 5779 NM_001284282 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr3-8957 chr3 15021402 15021612 + 3.53 0.000 intron (NM_003298, intron 6 of 14) intron (NM_003298, intron 6 of 14) 43808 NM_022497 64432 Hs.657764 NM_022497 ENSG00000131368 MRPS25 MRP-S25|RPMS25 mitochondrial ribosomal protein S25 protein-coding chr6-6959 chr6 17538951 17539161 + 3.53 0.000 intron (NM_006366, intron 7 of 12) intron (NM_006366, intron 7 of 12) -27791 NR_110855 101928491 Hs.622876 NR_110855 LOC101928491 - uncharacterized LOC101928491 ncRNA chr6-6928 chr6 14921540 14921750 + 3.53 0.000 Intergenic Intergenic -324424 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr11-7369 chr11 72902231 72902441 + 3.53 0.000 intron (NM_014824, intron 10 of 19) intron (NM_014824, intron 10 of 19) 87925 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr1-11834 chr1 33234811 33235021 + 3.53 0.000 Intergenic Intergenic -21576 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr4-5628 chr4 3875708 3875918 + 3.53 0.000 Intergenic Intergenic 79615 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr6-3597 chr6 88714320 88714530 + 3.53 0.000 intron (NM_001286428, intron 11 of 13) intron (NM_001286428, intron 11 of 13) -175056 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA chr2-11641 chr2 5552967 5553177 + 3.53 0.000 Intergenic Intergenic 138046 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr13-3146 chr13 92296635 92296845 + 3.53 0.000 intron (NM_004466, intron 7 of 7) LTR12C|LTR|ERV1 55467 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr6-3272 chr6 152976888 152977098 + 3.53 0.000 intron (NM_001142522, intron 1 of 4) MER20|DNA|hAT-Charlie 6048 NM_012177 26271 Hs.520506 NM_012177 ENSG00000112029 FBXO5 EMI1|FBX5|Fbxo31 F-box protein 5 protein-coding chr3-9739 chr3 68218081 68218291 + 3.53 0.000 intron (NM_001252216, intron 2 of 4) intron (NM_001252216, intron 2 of 4) 213939 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr12-4570 chr12 29736152 29736362 + 3.53 0.000 intron (NM_001367875, intron 5 of 19) intron (NM_001367875, intron 5 of 19) 47685 NM_001193451 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chrX-3178 chrX 37591442 37591652 + 3.53 0.000 intron (NM_198511, intron 1 of 5) LTR16A2|LTR|ERVL 19886 NM_001170331 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chr2-12566 chr2 69504003 69504213 + 3.53 0.000 intron (NM_014911, intron 16 of 21) intron (NM_014911, intron 16 of 21) 16063 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr5-8031 chr5 90224726 90224936 + 3.53 0.000 intron (NR_120601, intron 3 of 5) LTR41C|LTR|ERVL 65240 NR_120601 101929495 Hs.346679 NR_120601 LINC01339 - long intergenic non-protein coding RNA 1339 ncRNA chr20-1465 chr20 64236187 64236397 + 3.53 0.000 intron (NM_004535, intron 19 of 22) intron (NM_004535, intron 19 of 22) -19403 NM_001104925 55251 Hs.744845 NM_018257 ENSG00000203880 PCMTD2 C20orf36 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding chr19-5936 chr19 51630997 51631207 + 3.53 0.000 promoter-TSS (NM_003830) promoter-TSS (NM_003830) -628 NM_003830 8778 Hs.310333 NM_003830 ENSG00000105501 SIGLEC5 CD170|CD33L2|OB-BP2|OBBP2|SIGLEC-5 sialic acid binding Ig like lectin 5 protein-coding chr9-8735 chr9 132530364 132530574 + 3.53 0.000 intron (NM_207417, intron 4 of 6) AluSx1|SINE|Alu -52137 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chrX-3730 chrX 119335571 119335781 + 3.53 0.000 TTS (NR_110396) TTS (NR_110396) 44147 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr14-4584 chr14 50018701 50018911 + 3.53 0.000 intron (NR_131171, intron 6 of 8) intron (NR_131171, intron 6 of 8) -11286 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr11-8270 chr11 68813416 68813626 + 3.53 0.000 intron (NM_001031847, intron 2 of 18) AluSx1|SINE|Alu 28395 NM_001876 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr1-12435 chr1 12174861 12175071 + 3.53 0.000 intron (NM_001066, intron 1 of 9) intron (NM_001066, intron 1 of 9) 7975 NM_001066 7133 Hs.256278 NM_001066 ENSG00000028137 TNFRSF1B CD120b|TBPII|TNF-R-II|TNF-R75|TNFBR|TNFR1B|TNFR2|TNFR80|p75|p75TNFR TNF receptor superfamily member 1B protein-coding chr6-7729 chr6 90168194 90168404 + 3.53 0.000 intron (NM_021813, intron 4 of 8) AluJb|SINE|Alu 128544 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr11-5261 chr11 32881012 32881222 + 3.53 0.000 Intergenic AluJo|SINE|Alu -11694 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr5-8930 chr5 158037162 158037372 + 3.53 0.000 Intergenic SVA_B|Retroposon|SVA -178122 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr6-7985 chr6 115072467 115072677 + 3.53 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 571263 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr7-4280 chr7 10314038 10314248 + 3.53 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -388533 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA chr1-14798 chr1 71538600 71538810 + 3.42 0.000 intron (NM_173808, intron 6 of 6) intron (NM_173808, intron 6 of 6) 298307 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA ML143361.1-2 ML143361.1 289825 290035 + 3.42 0.000 NA NA NA NA chr7-7950 chr7 11170478 11170688 + 3.42 0.000 TTS (NM_001007157) TTS (NM_001007157) 196711 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr13-3786 chr13 45092666 45092876 + 3.42 0.000 Intergenic LTR67B|LTR|ERVL -13508 NR_120424 101929259 Hs.638490 NR_120424 LOC101929259 - uncharacterized LOC101929259 ncRNA chr14-4293 chr14 20707616 20707826 + 3.42 0.000 Intergenic MER21C|LTR|ERVL 18957 NM_194431 6038 Hs.283749 NM_002937 ENSG00000258818 RNASE4 RAB1|RNS4 ribonuclease A family member 4 protein-coding chr4-3222 chr4 41077090 41077300 + 3.42 0.000 intron (NM_173075, intron 3 of 16) AluJo|SINE|Alu 137347 NM_001330656 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chrX-4424 chrX 53949628 53949838 + 3.42 0.000 intron (NM_001184898, intron 20 of 21) AluY|SINE|Alu 93414 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr3-5892 chr3 38293008 38293218 + 3.42 0.000 intron (NM_001320033, intron 1 of 10) HERV17-int|LTR|ERV1 10819 NM_001320033 9389 Hs.165559 NM_004803 ENSG00000144671 SLC22A14 OCTL2|OCTL4|ORCTL4 solute carrier family 22 member 14 protein-coding chr2-12749 chr2 84862408 84862618 + 3.42 0.000 intron (NM_001307978, intron 2 of 4) intron (NM_001307978, intron 2 of 4) 18571 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chrX-4790 chrX 98726879 98727089 + 3.42 0.000 Intergenic L1M1|LINE|L1 -1162449 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr3-9586 chr3 55776467 55776677 + 3.42 0.000 intron (NR_132749, intron 13 of 17) intron (NR_132749, intron 13 of 17) 76022 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr1-12562 chr1 29669561 29669771 + 3.42 0.000 Intergenic Intergenic -319552 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr21-994 chr21 13015490 13015700 + 3.42 0.000 Intergenic Intergenic -22571 NR_026916 149992 Hs.558645 NM_153773 ANKRD30BP2 C21orf99|CT85|CTSP-1|CTSP1 ankyrin repeat domain 30B pseudogene 2 pseudo chr4-5956 chr4 164447131 164447341 + 3.42 0.000 Intergenic MSTC|LTR|ERVL-MaLR -63981 NM_001166373 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr11-9374 chr11 49382092 49382302 + 3.42 0.000 Intergenic AluSx1|SINE|Alu -173595 NM_004476 2346 Hs.551896 NM_004476 ENSG00000086205 FOLH1 FGCP|FOLH|GCP2|GCPII|NAALAD1|NAALAdase|PSM|PSMA|mGCP folate hydrolase 1 protein-coding chr14-5008 chr14 77505869 77506079 + 3.42 0.000 TTS (NM_004863) TTS (NM_004863) -7158 NM_199296 145501 Hs.29742 NM_182509 ENSG00000100593 ISM2 TAIL1|THSD3 isthmin 2 protein-coding chr17-6206 chr17 5500102 5500312 + 3.42 0.000 3' UTR (NM_001162371, exon 1 of 2) 3' UTR (NM_001162371, exon 1 of 2) 799 NM_001162371 728392 Hs.104305 NM_001162371 ENSG00000286190 LOC728392 - uncharacterized LOC728392 protein-coding chrX-4410 chrX 53248930 53249140 + 3.42 0.000 intron (NM_001111125, intron 5 of 14) MIR3|SINE|MIR -23613 NM_001353984 8242 Hs.631768 NM_004187 ENSG00000126012 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine demethylase 5C protein-coding chr12-5165 chr12 102702517 102702727 + 3.42 0.000 Intergenic Intergenic 121777 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr6-4195 chr6 3075138 3075348 + 3.42 0.000 intron (NM_001317061, intron 2 of 12) L1ME4a|LINE|L1 6749 NM_001354930 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 IMD57|RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr1-9157 chr1 19519232 19519442 + 3.42 0.000 Intergenic Intergenic -33798 NM_001206540 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr2-11345 chr2 203225515 203225725 + 3.42 0.000 Intergenic AluJr4|SINE|Alu -12821 NM_177538 57404 Hs.446065 NM_020674 ENSG00000119004 CYP20A1 CYP-M cytochrome P450 family 20 subfamily A member 1 protein-coding chr12-5516 chr12 131437450 131437660 + 3.42 0.000 Intergenic Intergenic 90085 NR_103736 338797 Hs.592007 NM_001025466 LINC02370 - long intergenic non-protein coding RNA 2370 ncRNA chr19-5775 chr19 31200513 31200723 + 3.42 0.000 intron (NR_147209, intron 3 of 4) L1MC1|LINE|L1 33108 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA KV880764.1-1 KV880764.1 131802 132012 + 3.42 0.000 NA NA NA NA chr11-10237 chr11 100581252 100581462 + 3.42 0.000 Intergenic Intergenic -105931 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr14-4034 chr14 52562412 52562622 + 3.42 0.000 intron (NM_001353361, intron 1 of 7) FLAM_A|SINE|Alu 9681 NM_001099652 283554 Hs.416214 NM_001099652 ENSG00000180998 GPR137C TM7SF1L2 G protein-coupled receptor 137C protein-coding chr4-5986 chr4 183126786 183126996 + 3.42 0.000 intron (NM_024949, intron 1 of 22) AluJo|SINE|Alu 27634 NM_024949 80014 Hs.333179 NM_024949 ENSG00000151718 WWC2 BOMB WW and C2 domain containing 2 protein-coding chr5-3889 chr5 150124088 150124298 + 3.42 0.000 intron (NM_002609, intron 14 of 22) intron (NM_002609, intron 14 of 22) -10821 NM_005211 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr4-7010 chr4 24293301 24293511 + 3.42 0.000 intron (NM_001330752, intron 1 of 13) intron (NM_001330752, intron 1 of 13) 179499 NR_148987 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr16-5182 chr16 7559831 7560041 + 3.42 0.000 intron (NM_145893, intron 2 of 13) intron (NM_145893, intron 2 of 13) 227091 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr10-8420 chr10 85001453 85001663 + 3.42 0.000 Intergenic Intergenic 197347 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA chr12-6527 chr12 110173101 110173311 + 3.42 0.000 intron (NR_144950, intron 11 of 18) SVA_D|Retroposon|SVA 48849 NR_144950 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr11-8365 chr11 82768559 82768769 + 3.42 0.000 Intergenic Intergenic -34800 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr8-5290 chr8 142207985 142208195 + 3.42 0.000 intron (NR_024378, intron 2 of 2) ERVL-E-int|LTR|ERVL 9734 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr14-4495 chr14 37306004 37306214 + 3.42 0.000 intron (NM_138731, intron 8 of 13) intron (NM_138731, intron 8 of 13) 108172 NM_138731 145282 Hs.660396 NM_138731 ENSG00000151338 MIPOL1 CCDC193 mirror-image polydactyly 1 protein-coding chr10-7366 chr10 1833041 1833251 + 3.42 0.000 Intergenic AluSx1|SINE|Alu -95621 NM_018702 105 Hs.586663 NM_018702 ENSG00000185736 ADARB2 ADAR3|RED2 adenosine deaminase RNA specific B2 (inactive) protein-coding chr6-3699 chr6 165567893 165568103 + 3.42 0.000 intron (NM_001130690, intron 1 of 21) AluY|SINE|Alu 94102 NM_001130690 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr5-7001 chr5 152909329 152909539 + 3.42 0.000 intron (NR_109877, intron 2 of 4) intron (NR_109877, intron 2 of 4) 62915 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA chr5-8225 chr5 109316128 109316338 + 3.42 0.000 intron (NR_149040, intron 3 of 3) AluSz6|SINE|Alu 10136 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr2-6291 chr2 57513886 57514096 + 3.42 0.000 Intergenic HAL1ME|LINE|L1 -393660 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr2-11880 chr2 23476911 23477121 + 3.42 0.000 intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 91837 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr12-7110 chr12 45861689 45861899 + 3.42 0.000 intron (NM_152641, intron 16 of 20) AluSz|SINE|Alu 128780 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr20-4107 chr20 41222221 41222431 + 3.42 0.000 intron (NM_015035, intron 2 of 3) L2a|LINE|L2 53303 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr10-9191 chr10 132029399 132029609 + 3.42 0.000 Intergenic Intergenic -36442 NM_001323090 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr10-3238 chr10 112776577 112776787 + 3.42 0.000 intron (NM_001365713, intron 8 of 8) AluSx|SINE|Alu -46814 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chrX-3009 chrX 53250717 53250927 + 3.42 0.000 exon (NM_015075, exon 5 of 14) exon (NM_015075, exon 5 of 14) -25400 NM_001353984 8242 Hs.631768 NM_004187 ENSG00000126012 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine demethylase 5C protein-coding chr20-4326 chr20 52895404 52895614 + 3.42 0.000 Intergenic MER45A|DNA|hAT-Tip100 -76849 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr5-6977 chr5 147657704 147657914 + 3.42 0.000 intron (NM_001282282, intron 2 of 20) L1PA8|LINE|L1 97815 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA chr2-7266 chr2 233046851 233047061 + 3.42 0.000 Intergenic AluJb|SINE|Alu -13386 NM_005541 3635 Hs.262886 NM_005541 ENSG00000168918 INPP5D SHIP|SHIP-1|SHIP1|SIP-145|hp51CN|p150Ship inositol polyphosphate-5-phosphatase D protein-coding chr7-9508 chr7 138325048 138325258 + 3.42 0.000 Intergenic Intergenic -135106 NM_015905 8805 Hs.490287 NM_003852 ENSG00000122779 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding chr12-7435 chr12 61356803 61357013 + 3.42 0.000 Intergenic MER52D|LTR|ERV1 835931 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr8-5279 chr8 139816969 139817179 + 3.42 0.000 intron (NM_001160372, intron 21 of 22) (AC)n|Simple_repeat|Simple_repeat -113951 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding KN538371.1-1 KN538371.1 176045 176255 + 3.42 0.000 NA NA NA NA chr2-9738 chr2 71672684 71672894 + 3.42 0.000 intron (NM_001130985, intron 50 of 54) intron (NM_001130985, intron 50 of 54) 206090 NM_001130455 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr11-9227 chr11 41134268 41134478 + 3.42 0.000 intron (NM_001258419, intron 1 of 6) AluJr|SINE|Alu 325263 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr12-7834 chr12 101260358 101260568 + 3.42 0.000 Intergenic Intergenic -19642 NM_014503 27340 Hs.295732 NM_014503 ENSG00000120800 UTP20 1A6/DRIM|DRIM UTP20 small subunit processome component protein-coding chr14-2685 chr14 76866947 76867157 + 3.42 0.000 intron (NM_194287, intron 12 of 13) (TG)n|Simple_repeat|Simple_repeat 40644 NM_194287 145497 Hs.147276 NM_194287 ENSG00000100565 LRRC74A C14orf166B|LRRC74 leucine rich repeat containing 74A protein-coding chr12-8322 chr12 129669758 129669968 + 3.42 0.000 intron (NM_133448, intron 2 of 8) HUERS-P1-int|LTR|ERV1 234162 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr18-2708 chr18 63057706 63057916 + 3.42 0.000 Intergenic Intergenic 261569 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr2-6821 chr2 60894752 60894962 + 3.42 0.000 intron (NM_002908, intron 3 of 10) AluSp|SINE|Alu 13283 NM_001291746 5966 Hs.631886 NM_002908 ENSG00000162924 REL C-Rel REL proto-oncogene, NF-kB subunit protein-coding chr7-9227 chr7 119280993 119281203 + 3.42 0.000 Intergenic L1MA2|LINE|L1 626277 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr6-7400 chr6 51340504 51340714 + 3.42 0.000 Intergenic Intergenic -281261 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr2-9789 chr2 118199047 118199257 + 3.42 0.000 Intergenic Intergenic -12766 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr4-5455 chr4 33424819 33425029 + 3.42 0.000 Intergenic Intergenic 614969 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr22-3607 chr22 20354781 20354991 + 3.42 0.000 Intergenic CpG 13889 NR_136572 101927859 NR_136572 FAM230G - family with sequence similarity 230 member G ncRNA chr20-3735 chr20 18090864 18091074 + 3.42 0.000 Intergenic AluJo|SINE|Alu -31781 NM_001303462 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr13-4362 chr13 106164079 106164289 + 3.42 0.000 Intergenic L1PA7|LINE|L1 -212380 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr11-8538 chr11 129129324 129129534 + 3.42 0.000 intron (NM_001142685, intron 2 of 21) SVA_B|Retroposon|SVA 62769 NM_001142685 9743 Hs.440379 NM_014715 ENSG00000134909 ARHGAP32 GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP Rho GTPase activating protein 32 protein-coding chrX-3631 chrX 93361613 93361823 + 3.42 0.000 Intergenic Intergenic 311860 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr16-3148 chr16 75062206 75062416 + 3.42 0.000 intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 54461 NM_194436 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr13-3141 chr13 88624200 88624410 + 3.42 0.000 Intergenic AluJb|SINE|Alu -2548 NR_047490 100861553 Hs.560132 NR_047490 ENSG00000261666 LINC00560 - long intergenic non-protein coding RNA 560 ncRNA chr2-11561 chr2 55163 55373 + 3.42 0.000 Intergenic LTR71B|LTR|ERV1 -8763 NM_001077710 642273 Hs.8379 NM_001077710 ENSG00000184731 FAM110C - family with sequence similarity 110 member C protein-coding chr11-9209 chr11 38061650 38061860 + 3.42 0.000 Intergenic Intergenic 123154 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr2-11807 chr2 16929740 16929950 + 3.42 0.000 Intergenic Intergenic -264011 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr3-9396 chr3 48056706 48056916 + 3.42 0.000 intron (NM_002375, intron 1 of 18) SVA_F|Retroposon|SVA 32037 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr21-1703 chr21 30737185 30737395 + 3.42 0.000 Intergenic AluSq2|SINE|Alu 9969 NM_181617 337978 Hs.553699 NM_181617 ENSG00000187026 KRTAP21-2 KAP21.2 keratin associated protein 21-2 protein-coding chr8-4933 chr8 103487596 103487806 + 3.42 0.000 intron (NR_145701, intron 2 of 3) AluSc|SINE|Alu 11530 NR_145704 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA chr8-4844 chr8 32048369 32048579 + 3.42 0.000 intron (NR_104156, intron 3 of 3) (AT)n|Simple_repeat|Simple_repeat 22256 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr7-7095 chr7 157872047 157872257 + 3.42 0.000 intron (NM_130843, intron 11 of 21) intron (NM_130843, intron 11 of 21) 17567 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr16-5205 chr16 17624307 17624517 + 3.42 0.000 Intergenic AluSz|SINE|Alu -153452 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr12-4961 chr12 75209503 75209713 + 3.42 0.000 5' UTR (NM_139137, exon 1 of 5) 5' UTR (NM_139137, exon 1 of 5) 140 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding chr18-3004 chr18 24778913 24779123 + 3.42 0.000 Intergenic MLT2B1|LTR|ERVL 53237 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chr5-5569 chr5 149291516 149291726 + 3.42 0.000 intron (NM_152406, intron 1 of 18) intron (NM_152406, intron 1 of 18) 19762 NM_001323062 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr5-7660 chr5 53419944 53420154 + 3.42 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -60580 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chrX-3327 chrX 127448459 127448669 + 3.42 0.000 Intergenic Intergenic 603839 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr20-3513 chr20 63443228 63443438 + 3.42 0.000 intron (NM_172109, intron 4 of 7) (CATCAC)n|Simple_repeat|Simple_repeat 29322 NM_004518 3785 Hs.161851 NM_004518 ENSG00000075043 KCNQ2 BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2 potassium voltage-gated channel subfamily Q member 2 protein-coding chr5-6636 chr5 43374567 43374777 + 3.42 0.000 Intergenic AluSg|SINE|Alu 22465 NM_001301875 56477 Hs.656904 NM_019846 ENSG00000151882 CCL28 CCK1|MEC|SCYA28 C-C motif chemokine ligand 28 protein-coding chr7-7737 chr7 885395 885605 + 3.42 0.000 intron (NM_015949, intron 1 of 8) intron (NM_015949, intron 1 of 8) 8946 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 guided entry of tail-anchored proteins factor 4 protein-coding chr6-8123 chr6 127585736 127585946 + 3.42 0.000 intron (NM_001010905, intron 4 of 5) MER57A-int|LTR|ERV1 8667 NM_001010905 352999 Hs.226268 NM_001010905 ENSG00000184530 C6orf58 LEG1 chromosome 6 open reading frame 58 protein-coding chr16-5702 chr16 79722828 79723038 + 3.42 0.000 intron (NR_104663, intron 5 of 5) (TGG)n|Simple_repeat|Simple_repeat -47538 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr1-16336 chr1 218164436 218164646 + 3.42 0.000 Intergenic CpG -120752 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr2-12542 chr2 67684603 67684813 + 3.42 0.000 Intergenic Intergenic 140854 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr4-7286 chr4 52414399 52414609 + 3.42 0.000 Intergenic Intergenic 242035 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding chr5-8114 chr5 98070304 98070514 + 3.42 0.000 Intergenic Intergenic 90830 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr4-6441 chr4 136668753 136668963 + 3.42 0.000 Intergenic LTR16B|LTR|ERVL -524898 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA chr3-10422 chr3 130963915 130964125 + 3.42 0.000 exon (NM_001199180, exon 12 of 28) exon (NM_001199180, exon 12 of 28) 62834 NM_001288950 28990 Hs.100878 NM_014065 ENSG00000034533 ASTE1 HT001 asteroid homolog 1 protein-coding chr19-3608 chr19 53254839 53255049 + 3.42 0.000 promoter-TSS (NM_182609) promoter-TSS (NM_182609) -41 NM_182609 342926 Hs.20506 NM_182609 ENSG00000197928 ZNF677 - zinc finger protein 677 protein-coding chr2-12781 chr2 85953361 85953571 + 3.42 0.000 Intergenic Intergenic 64186 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr6-5617 chr6 45514798 45515008 + 3.42 0.000 intron (NM_001015051, intron 7 of 7) intron (NM_001015051, intron 7 of 7) 92628 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr12-8327 chr12 130119800 130120010 + 3.42 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 41773 NR_033834 440119 Hs.288262 NR_033834 ENSG00000250208 FZD10-AS1 FZD10-DT FZD10 antisense divergent transcript ncRNA chr5-6835 chr5 112554615 112554825 + 3.42 0.000 Intergenic Intergenic -73716 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA chr18-1891 chr18 29443158 29443368 + 3.42 0.000 Intergenic L1MC4a|LINE|L1 -855647 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr3-4691 chr3 50060651 50060861 + 3.42 0.000 intron (NM_001349194, intron 8 of 17) AluY|SINE|Alu -28163 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr6-7500 chr6 63522751 63522961 + 3.42 0.000 Intergenic Intergenic -49156 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr4-8726 chr4 183819215 183819425 + 3.42 0.000 intron (NR_132761, intron 1 of 2) SVA_C|Retroposon|SVA 21298 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr14-4050 chr14 55876337 55876547 + 3.42 0.000 Intergenic Intergenic -79768 NR_026796 645687 Hs.569345 NR_026796 ENSG00000258791 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA chr14-4703 chr14 58224340 58224550 + 3.42 0.000 intron (NM_018477, intron 10 of 12) AluSx|SINE|Alu -20360 NM_152132 5684 Hs.558799 NM_002788 ENSG00000100567 PSMA3 HC8|PSC3 proteasome subunit alpha 3 protein-coding chr12-6260 chr12 43263042 43263252 + 3.42 0.000 Intergenic AluSz|SINE|Alu 107832 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr2-10739 chr2 33014905 33015115 + 3.42 0.000 intron (NM_206943, intron 2 of 33) FLAM_A|SINE|Alu 68057 NM_206943 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr12-6864 chr12 18548801 18549011 + 3.42 0.000 intron (NM_001288774, intron 26 of 32) intron (NM_001288774, intron 26 of 32) 188603 NM_001330769 89869 Hs.97542 NM_033123 ENSG00000139151 PLCZ1 NYD-SP27|PLC-zeta-1|PLCzeta|SPGF17 phospholipase C zeta 1 protein-coding chr2-11938 chr2 25421111 25421321 + 3.42 0.000 intron (NM_033147, intron 15 of 19) intron (NM_033147, intron 15 of 19) -78626 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr11-10169 chr11 93769180 93769390 + 3.42 0.000 Intergenic LTR48|LTR|ERV1 -14997 NM_004268 9440 Hs.444931 NM_004268 ENSG00000042429 MED17 CRSP6|CRSP77|DRIP80|SRB4|TRAP80 mediator complex subunit 17 protein-coding chr18-2268 chr18 74766038 74766248 + 3.42 0.000 intron (NM_001146190, intron 2 of 3) MLT2F|LTR|ERVL 135180 NM_001146190 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr5-6232 chr5 82667591 82667801 + 3.42 0.000 Intergenic AluSq2|SINE|Alu -172459 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr5-6424 chr5 154636617 154636827 + 3.42 0.000 Intergenic LTR5B|LTR|ERVK -40650 NR_036094 100422950 NR_036094 ENSG00000264760 MIR3141 mir-3141 microRNA 3141 ncRNA chr12-8027 chr12 113635588 113635798 + 3.42 0.000 Intergenic AluSz6|SINE|Alu 137990 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr4-8518 chr4 162669717 162669927 + 3.42 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 423806 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-9370 chr7 130386193 130386403 + 3.30 0.000 intron (NM_001868, intron 9 of 9) AluSc8|SINE|Alu 5804 NM_001868 1357 Hs.2879 NM_001868 ENSG00000091704 CPA1 CPA carboxypeptidase A1 protein-coding chr2-10542 chr2 236580732 236580942 + 3.30 0.000 exon (NM_020311, exon 2 of 2) exon (NM_020311, exon 2 of 2) 11012 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr1-14991 chr1 90698462 90698672 + 3.30 0.000 Intergenic Intergenic 18735 NM_020063 343472 Hs.451956 NM_020063 ENSG00000143032 BARHL2 - BarH like homeobox 2 protein-coding chr5-8478 chr5 132668212 132668422 + 3.30 0.000 Intergenic Intergenic -5669 NM_001354990 3565 Hs.73917 NM_000589 ENSG00000113520 IL4 BCGF-1|BCGF1|BSF-1|BSF1|IL-4 interleukin 4 protein-coding chr3-10859 chr3 167987514 167987724 + 3.30 0.000 Intergenic L1MA2|LINE|L1 91671 NR_145443 646168 Hs.390443 NR_033843 ENSG00000244227 LRRC77P LINC01330 leucine rich repeat containing 77, pseudogene pseudo chr7-6893 chr7 70437727 70437937 + 3.30 0.000 intron (NM_015570, intron 5 of 18) AluY|SINE|Alu -694312 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr20-2927 chr20 741109 741319 + 3.30 0.000 Intergenic AluSx4|SINE|Alu 27286 NM_033409 113278 Hs.283865 NM_033409 ENSG00000101276 SLC52A3 BVVLS|BVVLS1|C20orf54|RFT2|RFVT3|bA371L19.1|hRFT2 solute carrier family 52 member 3 protein-coding chr1-13428 chr1 2772946 2773156 + 3.30 0.000 intron (NM_001242672, intron 5 of 7) intron (NM_001242672, intron 5 of 7) 27817 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr3-10674 chr3 150520328 150520538 + 3.30 0.000 Intergenic Intergenic 26063 NM_014445 27230 Hs.518326 NM_014445 ENSG00000120742 SERP1 RAMP4 stress associated endoplasmic reticulum protein 1 protein-coding chr2-13021 chr2 108003562 108003772 + 3.30 0.000 intron (NM_021815, intron 6 of 8) intron (NM_021815, intron 6 of 8) 17143 NM_001305007 60482 Hs.287758 NM_021815 ENSG00000115665 SLC5A7 CHT|CHT1|CMS20|HMN7A solute carrier family 5 member 7 protein-coding chr2-14493 chr2 226873135 226873345 + 3.30 0.000 intron (NM_001349069, intron 5 of 8) Arthur1B|DNA|hAT-Tip100 37186 NM_032276 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding chr11-4615 chr11 8666247 8666457 + 3.30 0.000 Intergenic AluSq2|SINE|Alu -7516 NM_014818 9866 Hs.130836 NM_014818 ENSG00000166436 TRIM66 C11orf29|TIF1D|TIF1DELTA tripartite motif containing 66 protein-coding chr9-5037 chr9 29078295 29078505 + 3.30 0.000 intron (NM_001354574, intron 1 of 5) intron (NM_001354574, intron 1 of 5) 133899 NM_001354575 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chrX-3829 chrX 150559971 150560181 + 3.30 0.000 Intergenic L1MB2|LINE|L1 -8521 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr11-9733 chr11 68488704 68488914 + 3.30 0.000 intron (NM_001352362, intron 2 of 24) intron (NM_001352362, intron 2 of 24) 28057 NM_001352377 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr9-4546 chr9 83804377 83804587 + 3.30 0.000 intron (NM_025211, intron 3 of 12) SVA_D|Retroposon|SVA 13287 NM_025211 80318 Hs.522255 NM_025211 ENSG00000165113 GKAP1 FKSG21|GKAP42 G kinase anchoring protein 1 protein-coding chr4-6295 chr4 83708526 83708736 + 3.30 0.000 Intergenic Intergenic 172523 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr12-5954 chr12 82500112 82500322 + 3.30 0.000 Intergenic Intergenic -141412 NR_033192 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr3-10509 chr3 136983017 136983227 + 3.30 0.000 intron (NM_144717, intron 3 of 6) AluSz|SINE|Alu 25139 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding KI270924.1-1 KI270924.1 32453 32663 + 3.30 0.000 NA NA NA NA chr1-14418 chr1 44861008 44861218 + 3.30 0.000 intron (NM_020365, intron 10 of 11) intron (NM_020365, intron 10 of 11) -17860 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr5-6572 chr5 20134890 20135100 + 3.30 0.000 intron (NM_001291956, intron 2 of 14) intron (NM_001291956, intron 2 of 14) -146795 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr7-6775 chr7 20054930 20055140 + 3.30 0.000 intron (NR_110114, intron 1 of 5) AluYb8|SINE|Alu 85391 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr22-4150 chr22 44842354 44842564 + 3.30 0.000 intron (NM_181335, intron 7 of 11) L1M5|LINE|L1 89901 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr1-12230 chr1 212779435 212779645 + 3.30 0.000 intron (NM_001042549, intron 4 of 6) SVA_D|Retroposon|SVA 12237 NM_015471 25936 Hs.497692 NM_015471 ENSG00000117697 NSL1 C1orf48|DC8|MIS14 NSL1 component of MIS12 kinetochore complex protein-coding chr6-5921 chr6 63281810 63282020 + 3.30 0.000 intron (NM_001143940, intron 3 of 4) intron (NM_001143940, intron 3 of 4) 38062 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr5-7068 chr5 172199825 172200035 + 3.30 0.000 intron (NM_001171183, intron 2 of 3) AluSz|SINE|Alu 5758 NM_001171183 285588 Hs.716824 NM_001171183 ENSG00000214360 EFCAB9 - EF-hand calcium binding domain 9 protein-coding chr19-5659 chr19 6965867 6966077 + 3.30 0.000 intron (NR_024075, intron 10 of 15) AluSq2|SINE|Alu 24874 NR_024075 326342 Hs.688043 NM_001080498 ENSG00000268758 ADGRE4P EMR4|EMR4P|FIRE|GPR127|PGR16 adhesion G protein-coupled receptor E4, pseudogene pseudo chr5-9195 chr5 179927474 179927684 + 3.30 0.000 Intergenic L1ME3A|LINE|L1 -19682 NM_198868 23061 Hs.155829 NM_015043 ENSG00000197226 TBC1D9B GRAMD9B TBC1 domain family member 9B protein-coding chr21-1015 chr21 19890236 19890446 + 3.30 0.000 Intergenic L1PA13|LINE|L1 9414 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA chr12-7814 chr12 99286762 99286972 + 3.30 0.000 intron (NM_152788, intron 12 of 25) L1MA3|LINE|L1 -131777 NM_001204067 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr19-4378 chr19 2655883 2656093 + 3.30 0.000 intron (NM_052847, intron 1 of 4) AluSx1|SINE|Alu 25273 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr1-16552 chr1 233764308 233764518 + 3.30 0.000 Intergenic L1PA6|LINE|L1 140261 NR_039625 100616390 NR_039625 ENSG00000265744 MIR4427 - microRNA 4427 ncRNA chr12-7790 chr12 97254363 97254573 + 3.30 0.000 Intergenic Intergenic -208308 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr8-5616 chr8 97667729 97667939 + 3.30 0.000 intron (NM_001363139, intron 2 of 9) FLAM_C|SINE|Alu 23650 NM_001363136 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr15-4058 chr15 67719683 67719893 + 3.30 0.000 intron (NM_002757, intron 16 of 20) intron (NM_002757, intron 16 of 20) -105721 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chrX-3334 chrX 130024244 130024454 + 3.30 0.000 intron (NM_021946, intron 5 of 11) intron (NM_021946, intron 5 of 11) 19161 NM_021946 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr1-12176 chr1 189224846 189225056 + 3.30 0.000 Intergenic AluSc|SINE|Alu 1251059 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr10-7648 chr10 25296099 25296309 + 3.30 0.000 intron (NM_020752, intron 2 of 10) LTR16A1|LTR|ERVL -119928 NR_027333 100128811 Hs.700407 NR_027333 ENSG00000233642 GPR158-AS1 - GPR158 antisense RNA 1 ncRNA chr1-12839 chr1 93639260 93639470 + 3.30 0.000 intron (NM_001261409, intron 3 of 11) intron (NM_001261409, intron 3 of 11) -25268 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr10-7520 chr10 13700181 13700391 + 3.30 0.000 intron (NM_001318336, intron 13 of 23) intron (NM_001318336, intron 13 of 23) 7281 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr11-8041 chr11 21032338 21032548 + 3.30 0.000 intron (NM_201551, intron 12 of 18) AluSx3|SINE|Alu 362857 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr5-6434 chr5 157693996 157694206 + 3.30 0.000 Intergenic LTR12C|LTR|ERV1 22568 NM_001145132 100190949 Hs.720862 NM_001145132 ENSG00000187658 C5orf52 - chromosome 5 open reading frame 52 protein-coding chr9-7523 chr9 33604993 33605203 + 3.30 0.000 Intergenic LTR46|LTR|ERV1 -19127 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr4-8672 chr4 179664217 179664427 + 3.30 0.000 Intergenic MER6|DNA|TcMar-Tigger 1494827 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr4-8242 chr4 139140397 139140607 + 3.30 0.000 intron (NM_001371339, intron 1 of 9) AluJb|SINE|Alu 36716 NM_001371338 chr11-10507 chr11 119143232 119143442 + 3.30 0.000 Intergenic AluY|SINE|Alu -5715 NM_001348191 64137 Hs.126378 NM_022169 ENSG00000172350 ABCG4 WHITE2 ATP binding cassette subfamily G member 4 protein-coding chr13-2776 chr13 99671676 99671886 + 3.30 0.000 intron (NR_104592, intron 1 of 9) AluSz|SINE|Alu 19190 NR_046526 100874063 Hs.577064 NR_046526 ENSG00000227659 CLYBL-AS2 - CLYBL antisense RNA 2 ncRNA chr6-8108 chr6 126634936 126635146 + 3.30 0.000 Intergenic L1PA13|LINE|L1 150410 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr1-11535 chr1 162959728 162959938 + 3.30 0.000 Intergenic AluY|SINE|Alu -91018 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr10-4787 chr10 6107403 6107613 + 3.30 0.000 intron (NM_032905, intron 5 of 11) AluSz|SINE|Alu 18162 NM_001145547 84991 Hs.498548 NM_032905 ENSG00000134453 RBM17 SPF45 RNA binding motif protein 17 protein-coding chr2-11879 chr2 23335816 23336026 + 3.30 0.000 Intergenic Intergenic -49258 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr9-6526 chr9 111592921 111593131 + 3.30 0.000 intron (NM_001146109, intron 3 of 9) (A)n|Simple_repeat|Simple_repeat 6405 NM_012212 22949 Hs.584864 NM_012212 ENSG00000106853 PTGR1 LTB4DH|PGR1|ZADH3 prostaglandin reductase 1 protein-coding chr11-7389 chr11 77480432 77480642 + 3.30 0.000 Intergenic AluSz|SINE|Alu -6474 NM_001128620 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr5-8378 chr5 123312394 123312604 + 3.30 0.000 Intergenic L1PA10|LINE|L1 111093 NM_153223 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr12-8330 chr12 130496622 130496832 + 3.30 0.000 intron (NM_001351226, intron 4 of 21) intron (NM_001351226, intron 4 of 21) 131729 NM_015347 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding chr21-1259 chr21 9614140 9614350 + 3.30 0.000 Intergenic CpG -47944 NR_135513 105379514 Hs.543309 NR_135513 LOC105379514 - uncharacterized LOC105379514 ncRNA chr12-5038 chr12 87732292 87732502 + 3.30 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -36415 NR_149056 110806294 Hs.615803 NR_149056 LINC02258 - long intergenic non-protein coding RNA 2258 ncRNA chr11-8450 chr11 114162869 114163079 + 3.30 0.000 intron (NM_001354752, intron 2 of 4) intron (NM_001354752, intron 2 of 4) 99763 NM_001354752 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr12-5794 chr12 15209150 15209360 + 3.30 0.000 intron (NM_032918, intron 2 of 4) intron (NM_032918, intron 2 of 4) 12162 NM_032918 85004 Hs.199487 NM_032918 ENSG00000134533 RERG - RAS like estrogen regulated growth inhibitor protein-coding chr5-6541 chr5 11142393 11142603 + 3.30 0.000 intron (NM_001288715, intron 11 of 20) intron (NM_001288715, intron 11 of 20) -381264 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr3-9553 chr3 53467171 53467381 + 3.30 0.000 Intergenic AluY|SINE|Alu -27335 NM_001128840 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr3-7863 chr3 126023439 126023649 + 3.30 0.000 intron (NM_001164475, intron 4 of 9) LTR16B2|LTR|ERVL 33231 NM_001008487 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chr1-16450 chr1 227398444 227398654 + 3.30 0.000 Intergenic Intergenic -80057 NM_001366011 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr5-7622 chr5 45762805 45763015 + 3.30 0.000 Intergenic L1PA7|LINE|L1 -66530 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr3-10185 chr3 119105237 119105447 + 3.30 0.000 intron (NM_001353320, intron 1 of 7) intron (NM_001353320, intron 1 of 7) 40678 NM_001353322 152404 Hs.112873 NM_152538 ENSG00000144847 IGSF11 BT-IgSF|CT119|CXADRL1|Igsf13|VSIG3 immunoglobulin superfamily member 11 protein-coding chr14-4206 chr14 94435361 94435571 + 3.30 0.000 Intergenic THE1B|LTR|ERVL-MaLR 17334 NM_001080451 256394 Hs.145890 NM_001080451 ENSG00000186910 SERPINA11 - serpin family A member 11 protein-coding chr2-14018 chr2 191463121 191463331 + 3.30 0.000 Intergenic Intergenic -214846 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr2-12814 chr2 91566682 91566892 + 3.30 0.000 Intergenic G-rich|Low_complexity|Low_complexity 93162 NR_027238 654342 Hs.469287 NR_027238 LSP1P4 - LSP1 pseudogene 4 pseudo chr7-8163 chr7 29421035 29421245 + 3.30 0.000 intron (NM_001293072, intron 6 of 12) intron (NM_001293072, intron 6 of 12) -58572 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chrX-3271 chrX 97005786 97005996 + 3.30 0.000 intron (NM_007309, intron 17 of 26) L1MA3|LINE|L1 121983 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding chr21-1367 chr21 38478218 38478428 + 3.30 0.000 intron (NR_111949, intron 3 of 4) intron (NR_111949, intron 3 of 4) 20154 NM_182918 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr1-15297 chr1 116990654 116990864 + 3.30 0.000 TTS (NM_020440) TTS (NM_020440) -10991 NM_001256111 9398 Hs.654598 NM_004258 ENSG00000134256 CD101 EWI-101|IGSF2|V7 CD101 molecule protein-coding chr6-7925 chr6 109697299 109697509 + 3.30 0.000 intron (NM_014845, intron 1 of 22) MLT1F|LTR|ERVL-MaLR 6183 NM_014845 9896 Hs.529959 NM_014845 ENSG00000112367 FIG4 ALS11|BTOP|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding chr7-6880 chr7 56003020 56003230 + 3.30 0.000 Intergenic Intergenic 38540 NM_001202469 2631 Hs.591069 NM_001483 ENSG00000146729 NIPSNAP2 GBAS nipsnap homolog 2 protein-coding chr4-6396 chr4 117643640 117643850 + 3.30 0.000 intron (NR_125757, intron 2 of 3) L1MA3|LINE|L1 -190656 NR_147154 105377391 Hs.148448 NR_147154 ENSG00000229565 LINC02264 - long intergenic non-protein coding RNA 2264 ncRNA chr4-8774 chr4 188599762 188599972 + 3.30 0.000 intron (NR_033869, intron 4 of 4) Tigger1|DNA|TcMar-Tigger 144289 NR_033869 401164 Hs.435756 NR_033869 ENSG00000249378 LINC01060 - long intergenic non-protein coding RNA 1060 ncRNA chr10-7086 chr10 92583319 92583529 + 3.30 0.000 Intergenic AluSp|SINE|Alu -9329 NR_136399 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr4-6854 chr4 9863100 9863310 + 3.30 0.000 intron (NM_001001290, intron 11 of 12) AluJr4|SINE|Alu 81571 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr8-3433 chr8 81052036 81052246 + 3.30 0.000 intron (NM_018440, intron 2 of 8) AluY|SINE|Alu 59927 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr5-5799 chr5 176222107 176222317 + 3.30 0.000 Intergenic LTR12C|LTR|ERV1 -16147 NM_198567 375484 Hs.719847 NM_198567 ENSG00000170085 SIMC1 C5orf25|OOMA1|PLEIAD SUMO interacting motifs containing 1 protein-coding chr9-6173 chr9 80288404 80288614 + 3.30 0.000 Intergenic MamGypsy2-I|LTR|Gypsy 313486 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr1-15733 chr1 171304751 171304961 + 3.30 0.000 Intergenic Intergenic -9327 NM_002022 2329 Hs.386502 NM_002022 ENSG00000076258 FMO4 FMO2 flavin containing dimethylaniline monoxygenase 4 protein-coding chr19-5940 chr19 52710176 52710386 + 3.30 0.000 intron (NM_001161501, intron 4 of 4) AluSz|SINE|Alu 19601 NM_030972 81856 Hs.143951 NM_030972 ENSG00000213020 ZNF611 - zinc finger protein 611 protein-coding chr9-7462 chr9 27492187 27492397 + 3.30 0.000 intron (NM_024761, intron 1 of 3) intron (NM_024761, intron 1 of 3) -32022 NM_020124 56832 Hs.591083 NM_020124 ENSG00000147896 IFNK IFNT1|INFE1 interferon kappa protein-coding chr9-4279 chr9 109619962 109620172 + 3.30 0.000 Intergenic Intergenic -20721 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr2-9143 chr2 210337866 210338076 + 3.30 0.000 intron (NR_110606, intron 1 of 4) L1PA17|LINE|L1 13259 NR_110606 102724820 Hs.659232 NR_110604 LANCL1-AS1 LANCLOT LANCL1 antisense RNA 1 ncRNA chr14-5362 chr14 103278801 103279011 + 3.30 0.000 Intergenic CpG -38378 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr2-12398 chr2 54743142 54743352 + 3.30 0.000 intron (NM_001039753, intron 1 of 40) MER6A|DNA|TcMar-Tigger 18235 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chrX-5374 chrX 150536481 150536691 + 3.30 0.000 Intergenic Intergenic -32011 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr18-3066 chr18 31818160 31818370 + 3.30 0.000 Intergenic MIR|SINE|MIR -57385 NM_001034172 147407 Hs.567708 NM_001034172 ENSG00000141437 SLC25A52 MCART2 solute carrier family 25 member 52 protein-coding chr7-7052 chr7 141489933 141490143 + 3.30 0.000 Intergenic Intergenic -61372 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr11-10646 chr11 126445203 126445413 + 3.30 0.000 intron (NM_001301097, intron 9 of 15) intron (NM_001301097, intron 9 of 15) 39221 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr6-6587 chr6 139403217 139403427 + 3.30 0.000 Intergenic Intergenic -28674 NM_006079 10370 Hs.82071 NM_006079 ENSG00000164442 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 protein-coding chr9-6127 chr9 26373295 26373505 + 3.30 0.000 Intergenic MLT2B4|LTR|ERVL 306725 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr8-5819 chr8 4314035 4314245 + 3.30 0.000 intron (NM_033225, intron 3 of 69) intron (NM_033225, intron 3 of 69) 680774 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr7-4203 chr7 135729292 135729502 + 3.30 0.000 TTS (NM_205855) TTS (NM_205855) -1211 NM_001318192 26266 Hs.490241 NM_012450 ENSG00000164707 SLC13A4 NAS2|SUT-1|SUT1 solute carrier family 13 member 4 protein-coding chrX-5090 chrX 126711937 126712147 + 3.30 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -107687 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr2-10271 chr2 125632737 125632947 + 3.30 0.000 Intergenic Intergenic 485143 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr14-3751 chr14 41674603 41674813 + 3.30 0.000 intron (NM_001346173, intron 1 of 4) SVA_D|Retroposon|SVA 67852 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr12-8309 chr12 128921534 128921744 + 3.30 0.000 intron (NM_001366886, intron 6 of 11) intron (NM_001366886, intron 6 of 11) 68161 NM_001366886 144423 Hs.655668 NM_144669 ENSG00000151948 GLT1D1 - glycosyltransferase 1 domain containing 1 protein-coding chr22-3549 chr22 16965402 16965612 + 3.30 0.000 intron (NM_001037814, intron 6 of 9) MER94B|DNA|hAT-Blackjack 42715 NM_001366857 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2 associated binding protein family member 4 protein-coding chr12-5776 chr12 5536019 5536229 + 3.30 0.000 Intergenic MER21B|LTR|ERVL 41992 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr5-7435 chr5 30733913 30734123 + 3.30 0.000 Intergenic Intergenic -459668 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr4-5759 chr4 61541130 61541340 + 3.30 0.000 intron (NM_001371343, intron 4 of 23) intron (NM_001371343, intron 4 of 23) 339063 NM_001371342 chr10-7547 chr10 15247824 15248034 + 3.30 0.000 intron (NM_001010924, intron 5 of 7) MLT1F2|LTR|ERVL-MaLR -79236 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr10-6997 chr10 71919436 71919646 + 3.30 0.000 Intergenic PABL_A-int|LTR|ERV1 -44854 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr4-6306 chr4 85435000 85435210 + 3.30 0.000 Intergenic AluSc|SINE|Alu -40045 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr18-3155 chr18 41700379 41700589 + 3.30 0.000 Intergenic Intergenic -179807 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr11-8734 chr11 8039635 8039845 + 3.30 0.000 intron (NM_003320, intron 2 of 12) intron (NM_003320, intron 2 of 12) 1107 NM_003320 7275 Hs.568986 NM_003320 ENSG00000166402 TUB RDOB|rd5 TUB bipartite transcription factor protein-coding chr2-13869 chr2 178746411 178746621 + 3.30 0.000 exon (NM_133379, exon 46 of 46) exon (NM_133379, exon 46 of 46) -30410 NR_120594 101927055 Hs.570275 NR_120594 ENSG00000237298 LOC101927055 - uncharacterized LOC101927055 ncRNA chr8-5677 chr8 119911299 119911509 + 3.30 0.000 intron (NM_001283012, intron 1 of 6) AluSp|SINE|Alu 37682 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr1-12648 chr1 43186481 43186691 + 3.30 0.000 intron (NM_001195831, intron 5 of 23) AluYk3|SINE|Alu -14016 NM_001159936 10969 Hs.346868 NM_006824 ENSG00000117395 EBNA1BP2 EBP2|NOBP|P40 EBNA1 binding protein 2 protein-coding chrX-2415 chrX 74891092 74891302 + 3.30 0.000 intron (NM_001008537, intron 1 of 3) (AC)n|Simple_repeat|Simple_repeat 34255 NM_001008537 340533 Hs.124128 NM_001008537 ENSG00000050030 NEXMIF KIAA2022|KIDLIA|MRX98|XPN neurite extension and migration factor protein-coding chr21-1792 chr21 38343661 38343871 + 3.30 0.000 intron (NR_110545, intron 1 of 5) intron (NR_110545, intron 1 of 5) 2310 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr9-8000 chr9 93938693 93938903 + 3.30 0.000 Intergenic AluSc|SINE|Alu 16557 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr6-5880 chr6 41597798 41598008 + 3.30 0.000 promoter-TSS (NR_039784) promoter-TSS (NR_039784) -820 NR_039784 100616178 NR_039784 ENSG00000266494 MIR4641 - microRNA 4641 ncRNA chr6-3505 chr6 24506156 24506366 + 3.30 0.000 intron (NM_001368954, intron 4 of 8) AluSg7|SINE|Alu 11292 NM_001368954 7915 Hs.371723 NM_001080 ENSG00000112294 ALDH5A1 SSADH|SSDH aldehyde dehydrogenase 5 family member A1 protein-coding chr1-11620 chr1 234892164 234892374 + 3.30 0.000 Intergenic L2a|LINE|L2 71730 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr5-8824 chr5 150508047 150508257 + 3.30 0.000 promoter-TSS (NM_001543) promoter-TSS (NM_001543) 21 NM_001543 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr18-3561 chr18 77593787 77593997 + 3.30 0.000 Intergenic AluY|SINE|Alu 344044 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr10-6160 chr10 2296240 2296450 + 3.30 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 18729 NR_038884 399708 Hs.521270 NR_038884 LINC00701 - long intergenic non-protein coding RNA 701 ncRNA chr2-11319 chr2 198270292 198270502 + 3.30 0.000 Intergenic AluSq2|SINE|Alu 104700 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr1-8867 chr1 3868575 3868785 + 3.30 0.000 intron (NR_135152, intron 4 of 6) (CATAC)n|Simple_repeat|Simple_repeat 11204 NR_135150 1677 Hs.133089 NM_004402 ENSG00000169598 DFFB CAD|CPAN|DFF-40|DFF2|DFF40 DNA fragmentation factor subunit beta protein-coding chr6-5634 chr6 65094212 65094422 + 3.30 0.000 intron (NM_001292009, intron 12 of 43) L1MB1|LINE|L1 -207101 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr7-8542 chr7 55770725 55770935 + 3.30 0.000 Intergenic AluJb|SINE|Alu -66263 NR_003949 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr17-6490 chr17 27375177 27375387 + 3.30 0.000 Intergenic L1MEb|LINE|L1 -42723 NR_033892 440419 Hs.385755 NR_033892 ENSG00000266433 TBC1D3P5 - TBC1 domain family member 3 pseudogene 5 pseudo chr13-2272 chr13 27994825 27995035 + 3.30 0.000 Intergenic AluSz|SINE|Alu -6293 NM_001105577 646625 Hs.705356 NM_001105577 ENSG00000183463 URAD PRHOXNB ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase protein-coding chr20-4133 chr20 43349455 43349665 + 3.30 0.000 Intergenic Intergenic -108336 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr4-7982 chr4 113828673 113828883 + 3.30 0.000 Intergenic Intergenic -66851 NM_172127 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr22-3170 chr22 29580754 29580964 + 3.30 0.000 intron (NM_001202502, intron 1 of 9) intron (NM_001202502, intron 1 of 9) 237 NM_001202502 8508 Hs.173878 NM_003634 ENSG00000184117 NIPSNAP1 - nipsnap homolog 1 protein-coding chr2-10203 chr2 100321433 100321643 + 3.30 0.000 exon (NM_198461, exon 1 of 12) exon (NM_198461, exon 1 of 12) 1195 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr8-7261 chr8 129609038 129609248 + 3.30 0.000 intron (NR_130917, intron 1 of 3) L2a|LINE|L2 -34125 NR_130918 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr18-2768 chr18 893073 893283 + 3.30 0.000 Intergenic AluSp|SINE|Alu -11693 NM_001099733 116 Hs.531719 NM_001117 ENSG00000141433 ADCYAP1 PACAP adenylate cyclase activating polypeptide 1 protein-coding chr6-7818 chr6 101006867 101007077 + 3.30 0.000 Intergenic MSTD|LTR|ERVL-MaLR -125600 NM_001284271 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr1-8796 chr1 1746112 1746322 + 3.30 0.000 promoter-TSS (NM_182838) promoter-TSS (NM_182838) -218 NM_182838 9906 Hs.655255 NM_182838 ENSG00000215790 SLC35E2A SLC35E2 solute carrier family 35 member E2A protein-coding chr4-7505 chr4 74328740 74328950 + 3.30 0.000 Intergenic Intergenic 20375 NM_001270989 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr18-2421 chr18 13927859 13928069 + 3.30 0.000 Intergenic Intergenic -12257 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding chr4-6586 chr4 638824 639034 + 3.30 0.000 intron (NM_000283, intron 3 of 21) MER54B|LTR|ERVL 13355 NM_001145291 5158 Hs.623810 NM_000283 ENSG00000133256 PDE6B CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1 phosphodiesterase 6B protein-coding chr14-2725 chr14 92153632 92153842 + 3.30 0.000 intron (NM_001322272, intron 9 of 15) AluJb|SINE|Alu 31768 NM_001322270 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr16-5567 chr16 35272167 35272377 + 3.30 0.000 Intergenic HERVS71-int|LTR|ERV1 76513 NR_157262 112268173 Hs.369226 NR_157261 LOC112268173 - uncharacterized LOC112268173 ncRNA chr16-5440 chr16 1231497 1231707 + 3.30 0.000 Intergenic Intergenic -1418 NM_024164 64499 Hs.405479 NM_024164 ENSG00000197253 TPSB2 TPS2|tryptaseB|tryptaseC tryptase beta 2 (gene/pseudogene) protein-coding chr1-12136 chr1 171467601 171467811 + 3.30 0.000 Intergenic AluJb|SINE|Alu -17824 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding chr14-3785 chr14 57892708 57892918 + 3.30 0.000 Intergenic Intergenic -26721 NM_001306087 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr16-6823 chr16 81173236 81173446 + 3.30 0.000 intron (NM_001076780, intron 16 of 17) (TG)n|Simple_repeat|Simple_repeat 7990 NM_001278423 114780 Hs.413525 NM_052892 ENSG00000166473 PKD1L2 PC1L2 polycystin 1 like 2 (gene/pseudogene) protein-coding chr4-8010 chr4 116933612 116933822 + 3.30 0.000 Intergenic Intergenic 151859 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr2-13242 chr2 125553745 125553955 + 3.30 0.000 Intergenic Intergenic 564135 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr2-12043 chr2 30106637 30106847 + 3.30 0.000 Intergenic LTR46|LTR|ERV1 -40265 NM_016061 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr19-5683 chr19 10439804 10440014 + 3.30 0.000 intron (NM_001111309, intron 1 of 14) intron (NM_001111309, intron 1 of 14) 7474 NM_001111309 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr18-3080 chr18 33416550 33416760 + 3.30 0.000 intron (NM_001308126, intron 2 of 23) L1MDa|LINE|L1 23916 NM_001371121 chr7-6942 chr7 92568505 92568715 + 3.30 0.000 intron (NM_152789, intron 9 of 10) AluSq2|SINE|Alu 21439 NM_001288584 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr2-11281 chr2 183012664 183012874 + 3.30 0.000 intron (NM_013436, intron 2 of 30) AluSz|SINE|Alu 25688 NM_013436 10787 Hs.603732 NM_013436 ENSG00000061676 NCKAP1 HEM2|NAP1|NAP125|p125Nap1 NCK associated protein 1 protein-coding chr1-11867 chr1 39355351 39355561 + 3.30 0.000 intron (NM_012090, intron 38 of 92) AluSc|SINE|Alu -53617 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr4-3203 chr4 24985884 24986094 + 3.30 0.000 Intergenic AluYe5|SINE|Alu -5785 NM_173463 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr7-6764 chr7 15016628 15016838 + 3.30 0.000 Intergenic Intergenic -41875 NM_001350717 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr9-7871 chr9 86836063 86836273 + 3.30 0.000 Intergenic Intergenic 111338 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr2-7262 chr2 232227219 232227429 + 3.30 0.000 intron (NR_046477, intron 9 of 18) intron (NR_046477, intron 9 of 18) 54671 NR_030288 693147 NR_030288 ENSG00000207626 MIR562 MIRN562|hsa-mir-562 microRNA 562 ncRNA chr1-7799 chr1 50780792 50781002 + 3.30 0.000 intron (NM_007051, intron 4 of 18) intron (NM_007051, intron 4 of 18) 179370 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr12-6067 chr12 117114453 117114663 + 3.30 0.000 intron (NR_120464, intron 2 of 2) AluSz|SINE|Alu 15091 NR_120464 101928244 Hs.742266 NR_120464 TESC-AS1 - TESC antisense RNA 1 (head to head) ncRNA chr1-15176 chr1 109061838 109062048 + 3.30 0.000 Intergenic AluJb|SINE|Alu 14060 NM_005645 6884 Hs.632426 NM_005645 ENSG00000197780 TAF13 MRT60|TAF(II)18|TAF2K|TAFII-18|TAFII18 TATA-box binding protein associated factor 13 protein-coding chr14-4763 chr14 62921016 62921226 + 3.30 0.000 intron (NM_139318, intron 7 of 10) intron (NM_139318, intron 7 of 10) 124337 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr13-4308 chr13 99971275 99971485 + 3.30 0.000 exon (NM_033132, exon 1 of 2) exon (NM_033132, exon 1 of 2) 529 NR_146224 85416 Hs.508570 NM_033132 ENSG00000139800 ZIC5 - Zic family member 5 protein-coding GL000009.2-3 GL000009.2 200271 200481 + 3.30 0.000 NA NA NA NA chrX-2410 chrX 74412583 74412793 + 3.30 0.000 Intergenic SVA_C|Retroposon|SVA -8805 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr15-2971 chr15 50861729 50861939 + 3.30 0.000 Intergenic AluJr4|SINE|Alu -46849 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr3-7751 chr3 61710828 61711038 + 3.30 0.000 intron (NM_002841, intron 1 of 29) L1PA7|LINE|L1 149362 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr3-5452 chr3 179474689 179474899 + 3.30 0.000 Intergenic FRAM|SINE|Alu -23324 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding chr2-8123 chr2 80034245 80034455 + 3.30 0.000 intron (NM_001282598, intron 7 of 17) AluSx1|SINE|Alu -167767 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chrX-4435 chrX 54630155 54630365 + 3.30 0.000 Intergenic L1PB1|LINE|L1 100041 NM_001184819 54552 Hs.654677 NM_019067 ENSG00000130119 GNL3L GNL3B G protein nucleolar 3 like protein-coding chr3-11037 chr3 182779421 182779631 + 3.30 0.000 Intergenic Intergenic -13978 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr11-7406 chr11 92415747 92415957 + 3.30 0.000 intron (NM_001008781, intron 1 of 24) FLAM_A|SINE|Alu 63756 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr19-5271 chr19 49216615 49216825 + 3.30 0.000 Intergenic AluSp|SINE|Alu 58928 NM_001195227 54795 Hs.467101 NM_017636 ENSG00000130529 TRPM4 LTrpC4|PFHB1B|TRPM4B|hTRPM4 transient receptor potential cation channel subfamily M member 4 protein-coding chr8-6321 chr8 47540245 47540455 + 3.18 0.000 intron (NM_001352958, intron 10 of 21) intron (NM_001352958, intron 10 of 21) -113738 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr4-8528 chr4 163344348 163344558 + 3.18 0.000 5' UTR (NM_001317091, exon 1 of 4) 5' UTR (NM_001317091, exon 1 of 4) 351 NM_001317091 4889 Hs.519058 NM_006174 ENSG00000164129 NPY5R NPY5-R|NPYR5|NPYY5-R neuropeptide Y receptor Y5 protein-coding chr2-14463 chr2 223922805 223923015 + 3.18 0.000 intron (NM_020830, intron 1 of 11) intron (NM_020830, intron 1 of 11) 22425 NM_020830 57590 Hs.368359 NM_020830 ENSG00000085449 WDFY1 FENS-1|FENS1|WDF1|ZFYVE17 WD repeat and FYVE domain containing 1 protein-coding chr1-14444 chr1 46167327 46167537 + 3.18 0.000 intron (NM_001303427, intron 1 of 9) intron (NM_001303427, intron 1 of 9) 7469 NM_001328648 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr3-9854 chr3 79733858 79734068 + 3.18 0.000 intron (NM_002941, intron 1 of 30) AluSg|SINE|Alu 34035 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr2-12988 chr2 105774700 105774910 + 3.18 0.000 intron (NM_003581, intron 1 of 4) intron (NM_003581, intron 1 of 4) 29742 NM_001004722 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr7-6630 chr7 119694292 119694502 + 3.18 0.000 intron (NR_131960, intron 4 of 4) MLT1A1|LTR|ERVL-MaLR 212978 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr4-6490 chr4 153439543 153439753 + 3.18 0.000 Intergenic AluJb|SINE|Alu -26698 NM_015196 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr7-8875 chr7 90739802 90740012 + 3.18 0.000 intron (NM_001287137, intron 2 of 12) intron (NM_001287137, intron 2 of 12) 30091 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr5-9181 chr5 178523108 178523318 + 3.18 0.000 intron (NM_173465, intron 2 of 28) (AG)n|Simple_repeat|Simple_repeat 67180 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr15-5017 chr15 81957000 81957210 + 3.18 0.000 Intergenic AluSx|SINE|Alu 88913 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr11-7790 chr11 95600648 95600858 + 3.18 0.000 Intergenic L2c|LINE|L2 189029 NM_001330357 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr2-9947 chr2 241787339 241787549 + 3.18 0.000 intron (NM_022134, intron 1 of 3) MER4-int|LTR|ERV1 10622 NM_022134 64090 Hs.632556 NM_022134 ENSG00000154252 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding chr15-4173 chr15 95267557 95267767 + 3.18 0.000 Intergenic Intergenic 59438 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chrX-3833 chrX 151064537 151064747 + 3.18 0.000 Intergenic AluJb|SINE|Alu 81257 NM_001301228 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chrX-3890 chrX 6775375 6775585 + 3.18 0.000 Intergenic L1MB5|LINE|L1 -240362 NM_016379 51481 Hs.170076 NM_016379 ENSG00000169059 VCX3A VCX-8r|VCX-A|VCX3|VCX8R|VCXA variable charge X-linked 3A protein-coding chrX-4363 chrX 49053514 49053724 + 3.18 0.000 promoter-TSS (NM_001271836) promoter-TSS (NM_001271836) 47 NM_001271836 90060 Hs.522643 NM_033626 ENSG00000147144 CCDC120 JM11 coiled-coil domain containing 120 protein-coding chr14-2836 chr14 26567192 26567402 + 3.18 0.000 intron (NM_001366391, intron 2 of 5) AluJo|SINE|Alu -13867 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr7-3316 chr7 55630589 55630799 + 3.18 0.000 Intergenic LTR49-int|LTR|ERV1 57338 NR_027340 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr17-8072 chr17 52948947 52949157 + 3.18 0.000 Intergenic AluYh3|SINE|Alu -36453 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding chr14-4093 chr14 66621310 66621520 + 3.18 0.000 intron (NM_001024218, intron 1 of 21) THE1B-int|LTR|ERVL-MaLR 114008 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr2-14774 chr2 240538487 240538697 + 3.18 0.000 intron (NR_148698, intron 3 of 5) LTR12C|LTR|ERV1 19396 NM_016552 51281 Hs.656615 NM_016552 ENSG00000144504 ANKMY1 ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding chr7-7060 chr7 149098577 149098787 + 3.18 0.000 Intergenic AluY|SINE|Alu -7964 NM_152411 136051 Hs.729572 NM_152411 ENSG00000197362 ZNF786 - zinc finger protein 786 protein-coding chr11-10078 chr11 85231280 85231490 + 3.18 0.000 intron (NM_001142699, intron 4 of 27) L1MEf|LINE|L1 -307964 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr14-2290 chr14 58557689 58557899 + 3.18 0.000 Intergenic Intergenic -76274 NR_046093 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr12-7303 chr12 53899779 53899989 + 3.18 0.000 Intergenic AluJo|SINE|Alu -38947 NM_017410 3229 Hs.118608 NM_017410 ENSG00000123364 HOXC13 ECTD9|HOX3|HOX3G homeobox C13 protein-coding chr5-7608 chr5 44007730 44007940 + 3.18 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -380897 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr2-13559 chr2 154322331 154322541 + 3.18 0.000 intron (NM_052917, intron 9 of 12) intron (NM_052917, intron 9 of 12) 135002 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr5-3726 chr5 29659032 29659242 + 3.18 0.000 Intergenic AluYf1|SINE|Alu -221423 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chr4-6377 chr4 109555030 109555240 + 3.18 0.000 Intergenic Intergenic -5111 NM_017918 55013 Hs.234149 NM_017918 ENSG00000005059 MCUB CCDC109B mitochondrial calcium uniporter dominant negative beta subunit protein-coding chr21-1669 chr21 26732774 26732984 + 3.18 0.000 Intergenic L1PBa|LINE|L1 112530 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding chrX-3938 chrX 9958043 9958253 + 3.18 0.000 Intergenic AluJo|SINE|Alu -9210 NM_001195081 100288814 NM_001195081 ENSG00000234469 CLDN34 - claudin 34 protein-coding chr10-7459 chr10 7829086 7829296 + 3.18 0.000 intron (NM_031923, intron 2 of 6) L1MC3|LINE|L1 10686 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding chr8-5562 chr8 77149749 77149959 + 3.18 0.000 Intergenic L1PA8|LINE|L1 -148810 NM_001172087 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding chr14-4471 chr14 34938142 34938352 + 3.18 0.000 intron (NR_151701, intron 2 of 4) AluSc|SINE|Alu -1675 NR_002937 280655 Hs.639271 NR_002937 IGBP1P1 C14orf19 immunoglobulin (CD79A) binding protein 1 pseudogene 1 pseudo chr6-7225 chr6 40442666 40442876 + 3.18 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 64434 NR_160958 732253 Hs.180197 NM_001359094 TDRG1 LINC00532|lincRNA-NR_024015 testis development related 1 ncRNA KN538371.1-2 KN538371.1 197518 197728 + 3.18 0.000 NA NA NA NA chr8-5539 chr8 69786872 69787082 + 3.18 0.000 intron (NM_001146009, intron 1 of 7) intron (NM_001146009, intron 1 of 7) 46192 NM_001146009 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr6-5978 chr6 87575010 87575220 + 3.18 0.000 intron (NR_146756, intron 1 of 19) HAL1b|LINE|L1 14872 NM_020320 57038 Hs.485910 NM_020320 ENSG00000146282 RARS2 ArgRS|DALRD2|PCH6|PRO1992|RARSL arginyl-tRNA synthetase 2, mitochondrial protein-coding chr19-7041 chr19 50831326 50831536 + 3.18 0.000 promoter-TSS (NM_001277082) promoter-TSS (NM_001277082) 92 NR_102274 55554 Hs.567535 NM_017509 ENSG00000174562 KLK15 ACO|HSRNASPH kallikrein related peptidase 15 protein-coding chr20-3323 chr20 19838768 19838978 + 3.18 0.000 Intergenic Intergenic -47648 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr1-14541 chr1 51736942 51737152 + 3.18 0.000 intron (NM_148905, intron 1 of 18) intron (NM_148905, intron 1 of 18) 7197 NM_148905 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr14-4776 chr14 64345212 64345422 + 3.18 0.000 TTS (NR_033777) TTS (NR_033777) 2294 NR_033777 441687 Hs.685242 NR_033777 TEX21P - testis expressed 21, pseudogene pseudo chr1-11416 chr1 58219407 58219617 + 3.18 0.000 intron (NM_001353980, intron 1 of 5) L2b|LINE|L2 30991 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr14-3645 chr14 74626841 74627051 + 3.18 0.000 Intergenic AluSq2|SINE|Alu -14709 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr11-8136 chr11 47893390 47893600 + 3.18 0.000 Intergenic SVA_B|Retroposon|SVA -44951 NM_015231 23279 Hs.643526 NM_015231 ENSG00000030066 NUP160 NPHS19 nucleoporin 160 protein-coding chr1-12684 chr1 48501379 48501589 + 3.18 0.000 Intergenic LTR32|LTR|ERVL -29276 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr8-5957 chr8 20406002 20406212 + 3.18 0.000 Intergenic Intergenic -102144 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr5-7583 chr5 42073301 42073511 + 3.18 0.000 Intergenic L1M4b|LINE|L1 101939 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA chr11-7799 chr11 98755959 98756169 + 3.18 0.000 Intergenic AluJr4|SINE|Alu -264885 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr15-5126 chr15 89854108 89854318 + 3.18 0.000 intron (NR_023361, intron 5 of 6) SVA_F|Retroposon|SVA -3492 NR_049817 100847059 NR_049817 ENSG00000264966 MIR5094 - microRNA 5094 ncRNA chr4-6271 chr4 77423181 77423391 + 3.18 0.000 Intergenic Intergenic -88467 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr1-12254 chr1 221998447 221998657 + 3.18 0.000 Intergenic LTR16A|LTR|ERVL -20032 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr1-13039 chr1 168833853 168834063 + 3.18 0.000 Intergenic Intergenic 47017 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr19-6654 chr19 33430721 33430931 + 3.18 0.000 intron (NM_001166056, intron 7 of 12) intron (NM_001166056, intron 7 of 12) 56302 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr12-6551 chr12 117986818 117987028 + 3.18 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -17933 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr9-7099 chr9 129357129 129357339 + 3.18 0.000 Intergenic MIRb|SINE|MIR 20311 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr17-7049 chr17 62224993 62225203 + 3.18 0.000 Intergenic Intergenic 50557 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr3-8717 chr3 190374208 190374418 + 3.18 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -13559 NM_006580 10686 Hs.251391 NM_006580 ENSG00000113946 CLDN16 HOMG3|PCLN1 claudin 16 protein-coding chr11-9805 chr11 70531145 70531355 + 3.18 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) -99844 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA chr3-7822 chr3 103240736 103240946 + 3.18 0.000 Intergenic MER102c|DNA|hAT-Charlie 283275 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr12-6703 chr12 4684608 4684818 + 3.18 0.000 intron (NM_005002, intron 9 of 10) intron (NM_005002, intron 9 of 10) 35389 NR_110112 101929549 Hs.663336 NR_110112 ENSG00000255474 GAU1 GALNT8-DT GALNT8 antisense upstream 1 ncRNA chr7-9023 chr7 101362967 101363177 + 3.18 0.000 exon (NM_001278563, exon 1 of 13) exon (NM_001278563, exon 1 of 13) 197 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr8-6974 chr8 107457864 107458074 + 3.18 0.000 intron (NM_001199859, intron 1 of 8) intron (NM_001199859, intron 1 of 8) 39949 NM_001199859 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr3-2766 chr3 155831399 155831609 + 3.18 0.000 intron (NM_001363883, intron 2 of 3) intron (NM_001363883, intron 2 of 3) 22902 NM_001363883 9197 Hs.478031 NM_004733 ENSG00000169359 SLC33A1 ACATN|AT-1|AT1|CCHLND|SPG42 solute carrier family 33 member 1 protein-coding chr10-8325 chr10 78900275 78900485 + 3.18 0.000 Intergenic Intergenic 167068 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr9-4507 chr9 61699004 61699214 + 3.18 0.000 Intergenic AluSx|SINE|Alu -154975 NR_027421 100132948 Hs.645763 NM_001024942 ENSG00000231527 FAM27C FAM27A|FAM27A1|FAM27A3|bA7G23.5 family with sequence similarity 27 member C ncRNA chr17-7877 chr17 42973032 42973242 + 3.18 0.000 intron (NM_001142653, intron 3 of 5) SVA_F|Retroposon|SVA 6866 NM_025267 100885850 Hs.317403 NM_025267 ENSG00000108825 PTGES3L-AARSD1 - PTGES3L-AARSD1 readthrough protein-coding chrX-5099 chrX 127838158 127838368 + 3.18 0.000 Intergenic THE1-int|LTR|ERVL-MaLR 214140 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr1-15325 chr1 119472539 119472749 + 3.18 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -34559 NM_001328615 3283 Hs.364941 NM_000862 ENSG00000203857 HSD3B1 3BETAHSD|HSD3B|HSDB3|HSDB3A|SDR11E1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 protein-coding chr1-11932 chr1 62062481 62062691 + 3.18 0.000 intron (NM_001350145, intron 31 of 43) AluJr|SINE|Alu -16200 NR_036058 100422902 NR_036058 ENSG00000263908 MIR3116-1 - microRNA 3116-1 ncRNA chr7-8001 chr7 16583893 16584103 + 3.18 0.000 Intergenic Intergenic 57173 NM_001195280 100506049 Hs.278036 NM_001195280 ENSG00000205858 LRRC72 - leucine rich repeat containing 72 protein-coding chr3-8726 chr3 194025469 194025679 + 3.18 0.000 intron (NR_136179, intron 1 of 2) L2|LINE|L2 -21915 NR_033944 647323 Hs.652830 NR_033944 ENSG00000214146 LINC02026 - long intergenic non-protein coding RNA 2026 ncRNA chr7-7431 chr7 76498769 76498979 + 3.18 0.000 intron (NM_020892, intron 7 of 11) (GT)n|Simple_repeat|Simple_repeat -11549 NM_182684 105375355 Hs.488861 NM_030570 ENSG00000243566 UPK3B P35|UP3B|UPIIIB uroplakin 3B protein-coding chr10-4626 chr10 121711938 121712148 + 3.18 0.000 Intergenic Intergenic -113585 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr10-7544 chr10 14890350 14890560 + 3.18 0.000 intron (NM_001193427, intron 2 of 5) AluJb|SINE|Alu 11555 NM_024670 79723 Hs.554883 NM_024670 ENSG00000152455 SUV39H2 KMT1B suppressor of variegation 3-9 homolog 2 protein-coding chr19-4189 chr19 42639413 42639623 + 3.18 0.000 intron (NR_073180, intron 2 of 2) SVA_C|Retroposon|SVA -44594 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr20-3878 chr20 30596734 30596944 + 3.18 0.000 Intergenic AluSc8|SINE|Alu -193377 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 MLLT10 pseudogene 1 pseudo chr2-12582 chr2 70411642 70411852 + 3.18 0.000 Intergenic Intergenic 69893 NR_046798 100874273 Hs.682157 NR_046798 ENSG00000224606 TGFA-IT1 - TGFA intronic transcript 1 ncRNA chr2-9043 chr2 199275683 199275893 + 3.18 0.000 intron (NM_001172509, intron 10 of 10) intron (NM_001172509, intron 10 of 10) 182151 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr2-14033 chr2 193938729 193938939 + 3.18 0.000 Intergenic AluSz|SINE|Alu -405435 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr14-4734 chr14 61154570 61154780 + 3.18 0.000 Intergenic Intergenic 126663 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr1-15930 chr1 186634127 186634337 + 3.18 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 46191 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding chr4-7777 chr4 95395755 95395965 + 3.18 0.000 intron (NM_003728, intron 1 of 15) MER45A|DNA|hAT-Tip100 153113 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr3-7852 chr3 122165775 122165985 + 3.18 0.000 Intergenic SVA_F|Retroposon|SVA -17788 NM_000388 846 Hs.435615 NM_000388 ENSG00000036828 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1|hCasR calcium sensing receptor protein-coding chr7-9421 chr7 132749685 132749895 + 3.18 0.000 Intergenic Intergenic -9180 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr15-4883 chr15 76100278 76100488 + 3.18 0.000 intron (NM_152335, intron 1 of 10) intron (NM_152335, intron 1 of 10) 40398 NM_152335 123591 Hs.661411 NM_152335 ENSG00000169758 TMEM266 C15orf27|HVRP1|HsHVRP1|hTMEM266 transmembrane protein 266 protein-coding chr12-7489 chr12 66793295 66793505 + 3.18 0.000 intron (NM_001366724, intron 1 of 23) intron (NM_001366724, intron 1 of 23) 10869 NM_001366723 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 FRASRS3|GRIP glutamate receptor interacting protein 1 protein-coding chr16-6797 chr16 78863315 78863525 + 3.18 0.000 intron (NM_001291997, intron 7 of 7) Charlie4z|DNA|hAT-Charlie 737317 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chrX-3240 chrX 69170511 69170721 + 3.18 0.000 Intergenic L1MCa|LINE|L1 -5163 NM_001032396 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr19-7066 chr19 55098656 55098866 + 3.18 0.000 intron (NM_001271618, intron 6 of 21) intron (NM_001271618, intron 6 of 21) 18369 NM_017729 54869 Hs.438862 NM_017729 ENSG00000131037 EPS8L1 DRC3|EPS8R1|PP10566 EPS8 like 1 protein-coding chr1-14027 chr1 27064400 27064610 + 3.18 0.000 Intergenic SVA_E|Retroposon|SVA -51655 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr12-7029 chr12 34817524 34817734 + 3.18 0.000 Intergenic ALR/Alpha|Satellite|centr 795133 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr8-5660 chr8 112154121 112154331 + 3.18 0.000 Intergenic L1MA10|LINE|L1 -489267 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr10-7727 chr10 31383487 31383697 + 3.06 0.000 intron (NM_001323638, intron 4 of 12) intron (NM_001323638, intron 4 of 12) 16163 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr5-8738 chr5 146075543 146075753 + 3.06 0.000 Intergenic AluSq|SINE|Alu 29929 NM_001029869 153770 Hs.162369 NM_001029869 ENSG00000173261 PLAC8L1 - PLAC8 like 1 protein-coding chr1-9115 chr1 17742307 17742517 + 3.06 0.000 Intergenic AluSq|SINE|Alu -12921 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr4-5547 chr4 128033305 128033515 + 3.06 0.000 intron (NM_001366038, intron 13 of 13) intron (NM_001366038, intron 13 of 13) -27902 NM_178043 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr2-6257 chr2 44188305 44188515 + 3.06 0.000 intron (NM_177969, intron 1 of 4) AluJr|SINE|Alu 19535 NM_177968 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr18-3175 chr18 43610297 43610507 + 3.06 0.000 Intergenic L2c|LINE|L2 -332912 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr2-12420 chr2 56665016 56665226 + 3.06 0.000 Intergenic Intergenic -479351 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr11-4791 chr11 1098688 1098898 + 3.06 0.000 exon (NM_002457, exon 42 of 61) exon (NM_002457, exon 42 of 61) 23918 NM_002457 4583 Hs.315 NM_002457 MUC2 MLP|MUC-2|SMUC mucin 2, oligomeric mucus/gel-forming protein-coding chr1-12153 chr1 178791193 178791403 + 3.06 0.000 intron (NM_152663, intron 4 of 19) AluJo|SINE|Alu 66054 NM_152663 55103 Hs.632485 NM_018037 ENSG00000116191 RALGPS2 dJ595C2.1 Ral GEF with PH domain and SH3 binding motif 2 protein-coding chr5-4008 chr5 27777050 27777260 + 3.06 0.000 Intergenic LTR86C|LTR|ERVL 304863 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr3-9267 chr3 40429716 40429926 + 3.06 0.000 intron (NR_040100, intron 2 of 3) (TC)n|Simple_repeat|Simple_repeat 23487 NR_040100 285266 Hs.619663 NR_040100 ENSG00000223797 ENTPD3-AS1 - ENTPD3 antisense RNA 1 ncRNA chr2-10516 chr2 230693227 230693437 + 3.06 0.000 intron (NR_040038, intron 3 of 3) intron (NR_040038, intron 3 of 3) 7197 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr3-9316 chr3 44097350 44097560 + 3.06 0.000 Intergenic Intergenic -16757 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr7-8859 chr7 89375750 89375960 + 3.06 0.000 Intergenic L1PB2|LINE|L1 -580118 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding chr8-5216 chr8 116619573 116619783 + 3.06 0.000 Intergenic AluYm1|SINE|Alu -32422 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr17-7383 chr17 7903049 7903259 + 3.06 0.000 intron (NM_001005273, intron 22 of 39) intron (NM_001005273, intron 22 of 39) -2969 NR_003000 677763 NR_003000 ENSG00000252835 SCARNA21 ACA68|SCARNA21A small Cajal body-specific RNA 21 ncRNA chrX-5398 chrX 152336003 152336213 + 3.06 0.000 intron (NM_000808, intron 3 of 9) intron (NM_000808, intron 3 of 9) 56191 NR_029521 406897 NR_029521 ENSG00000207957 MIR105-1 MIRN105-1|mir-105-1 microRNA 105-1 ncRNA chr13-3147 chr13 93051346 93051556 + 3.06 0.000 intron (NR_126360, intron 2 of 3) L2|LINE|L2 6110 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA chr21-1553 chr21 9015068 9015278 + 3.06 0.000 Intergenic Intergenic 27556 NR_162105 113218501 NR_162105 MIR10396A - microRNA 10396a ncRNA chr22-3147 chr22 25221929 25222139 + 3.06 0.000 intron (NM_000496, intron 2 of 5) intron (NM_000496, intron 2 of 5) 2395 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding chr9-8509 chr9 125101438 125101648 + 3.06 0.000 intron (NM_173690, intron 2 of 18) L2a|LINE|L2 41985 NM_001144877 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr7-7299 chr7 41775240 41775450 + 3.06 0.000 intron (NR_027118, intron 3 of 3) intron (NR_027118, intron 3 of 3) -72255 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr21-1782 chr21 37600688 37600898 + 3.06 0.000 Intergenic LTR33B|LTR|ERVL 180494 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr1-15251 chr1 112834286 112834496 + 3.06 0.000 intron (NR_103746, intron 3 of 6) intron (NR_103746, intron 3 of 6) 16252 NR_103746 100996702 Hs.632431 NR_103746 ENSG00000215866 LINC01356 - long intergenic non-protein coding RNA 1356 ncRNA chr3-7710 chr3 49069453 49069663 + 3.06 0.000 intron (NM_017730, intron 3 of 10) Charlie6|DNA|hAT-Charlie 24074 NM_001320582 54870 Hs.297389 NM_017730 ENSG00000198218 QRICH1 AB-DIP|VERBRAS glutamine rich 1 protein-coding chr18-2772 chr18 1250601 1250811 + 3.06 0.000 Intergenic AluSc8|SINE|Alu 108923 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr12-6587 chr12 123525284 123525494 + 3.06 0.000 promoter-TSS (NM_001319302) promoter-TSS (NM_001319302) -431 NM_001319302 353116 Hs.530315 NM_178314 ENSG00000188026 RILPL1 GOSPEL|RLP1 Rab interacting lysosomal protein like 1 protein-coding chr21-1461 chr21 33244632 33244842 + 3.06 0.000 intron (NM_001289125, intron 3 of 8) intron (NM_001289125, intron 3 of 8) 14799 NM_000874 3455 Hs.708195 NM_000874 ENSG00000159110 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB|IMD45 interferon alpha and beta receptor subunit 2 protein-coding chr14-3355 chr14 90891942 90892152 + 3.06 0.000 intron (NM_001322237, intron 13 of 16) AluSz6|SINE|Alu -75617 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr7-7089 chr7 157088170 157088380 + 3.06 0.000 Intergenic Intergenic -50651 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr5-8657 chr5 140251962 140252172 + 3.06 0.000 intron (NM_002622, intron 3 of 3) MIR|SINE|MIR 51034 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr11-6915 chr11 107938473 107938683 + 3.06 0.000 intron (NM_017516, intron 1 of 1) AluJb|SINE|Alu 10130 NM_017516 54734 Hs.354906 NM_017516 ENSG00000179331 RAB39A RAB39 RAB39A, member RAS oncogene family protein-coding chrX-4762 chrX 95263510 95263720 + 3.06 0.000 Intergenic AluSx3|SINE|Alu -200389 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr1-14826 chr1 74829512 74829722 + 3.06 0.000 Intergenic Intergenic -96209 NM_001130043 1429 Hs.83114 NM_001889 ENSG00000116791 CRYZ - crystallin zeta protein-coding chr4-8065 chr4 122044291 122044501 + 3.06 0.000 Intergenic Intergenic -92336 NM_001130698 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr2-7051 chr2 160537476 160537686 + 3.06 0.000 Intergenic AluSz6|SINE|Alu -43774 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr5-6782 chr5 90221078 90221288 + 3.06 0.000 intron (NR_120601, intron 3 of 5) intron (NR_120601, intron 3 of 5) 68888 NR_120601 101929495 Hs.346679 NR_120601 LINC01339 - long intergenic non-protein coding RNA 1339 ncRNA chr4-5410 chr4 7175908 7176118 + 3.06 0.000 Intergenic AluY|SINE|Alu -16525 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding KQ759762.1-2 KQ759762.1 19703 19913 + 3.06 0.000 NA NA NA NA chr17-5294 chr17 21613874 21614084 + 3.06 0.000 Intergenic Intergenic -62301 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr9-5495 chr9 102971332 102971542 + 3.06 0.000 Intergenic L1MA7|LINE|L1 -23896 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding chr1-13588 chr1 8956868 8957078 + 3.06 0.000 intron (NM_001270500, intron 2 of 7) intron (NM_001270500, intron 2 of 7) 11105 NM_001215 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr2-13408 chr2 141011716 141011926 + 3.06 0.000 intron (NM_018557, intron 14 of 90) intron (NM_018557, intron 14 of 90) -425136 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr12-7538 chr12 70323487 70323697 + 3.06 0.000 intron (NM_001199302, intron 5 of 16) intron (NM_001199302, intron 5 of 16) -42698 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 - potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding chr1-10057 chr1 92225002 92225212 + 3.06 0.000 intron (NM_001012425, intron 1 of 5) L1ME1|LINE|L1 7192 NM_001012425 388649 Hs.558823 NM_001012425 ENSG00000203910 C1orf146 - chromosome 1 open reading frame 146 protein-coding chr12-7332 chr12 55241736 55241946 + 3.06 0.000 Intergenic LTR1A2|LTR|ERV1 -5447 NM_001005490 254783 Hs.554556 NM_001005490 ENSG00000197706 OR6C74 - olfactory receptor family 6 subfamily C member 74 protein-coding chr14-4959 chr14 74735448 74735658 + 3.06 0.000 3' UTR (NM_001318508, exon 8 of 8) 3' UTR (NM_001318508, exon 8 of 8) 22409 NM_001318508 51077 Hs.579828 NM_015962 ENSG00000119616 FCF1 Bka|C14orf111|CGI-35|UTP24 FCF1 rRNA-processing protein protein-coding chr8-6617 chr8 75519483 75519693 + 3.06 0.000 intron (NM_001330561, intron 3 of 11) THE1B|LTR|ERVL-MaLR -20380 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr7-7434 chr7 77167403 77167613 + 3.06 0.000 intron (NM_020879, intron 1 of 18) intron (NM_020879, intron 1 of 18) 32311 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding chr2-11141 chr2 141266234 141266444 + 3.06 0.000 intron (NM_018557, intron 3 of 90) AluY|SINE|Alu -679654 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr3-8180 chr3 38920572 38920782 + 3.06 0.000 intron (NM_014139, intron 6 of 25) AluSc5|SINE|Alu 29884 NM_014139 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr5-8427 chr5 127801634 127801844 + 3.06 0.000 intron (NM_001317938, intron 5 of 6) MER57D|LTR|ERV1 98350 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr3-8798 chr3 5952013 5952223 + 3.06 0.000 Intergenic Intergenic -701863 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr1-11564 chr1 194826138 194826348 + 3.06 0.000 Intergenic AluY|SINE|Alu 1262472 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA chr12-5624 chr12 56651781 56651991 + 3.06 0.000 Intergenic SVA_B|Retroposon|SVA -5902 NM_001686 506 Hs.406510 NM_001686 ENSG00000110955 ATP5F1B ATP5B|ATPMB|ATPSB|HEL-S-271 ATP synthase F1 subunit beta protein-coding chr5-8794 chr5 149381727 149381937 + 3.06 0.000 intron (NM_001317987, intron 1 of 2) intron (NM_001317987, intron 1 of 2) -2540 NM_014443 27190 Hs.156979 NM_014443 ENSG00000127743 IL17B IL-17B|IL-20|NIRF|ZCYTO7 interleukin 17B protein-coding chr11-8921 chr11 17063557 17063767 + 3.06 0.000 Intergenic Intergenic 11082 NR_000022 26822 NR_000022 ENSG00000272034 SNORD14A RNU14|RNU14A|U14|U14-S13-5 small nucleolar RNA, C/D box 14A snoRNA chr8-7326 chr8 133730394 133730604 + 3.06 0.000 Intergenic Intergenic -46433 NR_134463 105375773 Hs.445172 NR_134462 LOC105375773 - uncharacterized LOC105375773 ncRNA chr10-6740 chr10 131212133 131212343 + 3.06 0.000 intron (NM_174937, intron 4 of 11) intron (NM_174937, intron 4 of 11) 99483 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding chr12-5552 chr12 719521 719731 + 3.06 0.000 Intergenic LTR36|LTR|ERV1 -32953 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr3-7740 chr3 55506531 55506741 + 3.06 0.000 Intergenic MIR|SINE|MIR -18994 NM_003392 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr21-1815 chr21 39653687 39653897 + 3.06 0.000 intron (NM_001356336, intron 2 of 3) LTR41|LTR|ERVL -3541 NM_033172 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr1-14717 chr1 64793671 64793881 + 3.06 0.000 intron (NM_001366165, intron 5 of 11) L1ME1|LINE|L1 48701 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding chr1-14357 chr1 41692683 41692893 + 3.06 0.000 intron (NM_001127714, intron 1 of 7) L1ME3Cz|LINE|L1 -208105 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr2-13822 chr2 175709342 175709552 + 3.06 0.000 Intergenic L1PA7|LINE|L1 292820 NM_001305011 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr14-4304 chr14 21156376 21156586 + 3.06 0.000 promoter-TSS (NM_001004731) promoter-TSS (NM_001004731) -418 NM_001004731 390445 Hs.553768 NM_001004731 ENSG00000169327 OR5AU1 OR14-38 olfactory receptor family 5 subfamily AU member 1 protein-coding chr3-9594 chr3 56347561 56347771 + 3.06 0.000 intron (NR_132749, intron 2 of 17) LTR50|LTR|ERVL 120801 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr8-6828 chr8 97568139 97568349 + 3.06 0.000 Intergenic MER87B|LTR|ERV1 -75940 NM_001363137 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr8-5139 chr8 72797510 72797720 + 3.06 0.000 intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) 65570 NR_110656 101926908 Hs.680588 NR_110656 ENSG00000253726 LOC101926908 - uncharacterized LOC101926908 ncRNA chr12-7858 chr12 104435767 104435977 + 3.06 0.000 Intergenic Intergenic -21076 NM_018413 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr3-6736 chr3 138716792 138717002 + 3.06 0.000 intron (NM_006219, intron 8 of 23) AluSz|SINE|Alu -9276 NM_001256045 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr12-6464 chr12 96455744 96455954 + 3.06 0.000 Intergenic L1ME3Cz|LINE|L1 -33728 NM_001306084 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr5-6734 chr5 76379761 76379971 + 3.06 0.000 Intergenic MIRc|SINE|MIR -23419 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding chr7-6955 chr7 98873333 98873543 + 3.06 0.000 Intergenic AluY|SINE|Alu -3424 NM_152913 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr3-10112 chr3 112529339 112529549 + 3.06 0.000 Intergenic SATR2|Satellite|Satellite -29972 NM_001085357 151888 Hs.445162 NM_181780 ENSG00000186265 BTLA BTLA1|CD272 B and T lymphocyte associated protein-coding chr14-4295 chr14 20845064 20845274 + 3.06 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -42325 NM_002933 6035 Hs.78224 NM_002933 ENSG00000129538 RNASE1 RAC1|RIB1|RNS1 ribonuclease A family member 1, pancreatic protein-coding chr16-3804 chr16 48672523 48672733 + 3.06 0.000 Intergenic AluJb|SINE|Alu -62448 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr19-4564 chr19 10710826 10711036 + 3.06 0.000 intron (NM_031209, intron 5 of 9) AluSq2|SINE|Alu -7122 NM_001005362 1785 Hs.211463 NM_004945 ENSG00000079805 DNM2 CMT2M|CMTDI1|CMTDIB|DI-CMTB|DYN2|DYNII|LCCS5 dynamin 2 protein-coding chrX-3811 chrX 142587001 142587211 + 3.06 0.000 Intergenic MIRb|SINE|MIR -381816 NM_016249 51438 Hs.123536 NM_016249 ENSG00000046774 MAGEC2 CT10|HCA587|MAGEE1 MAGE family member C2 protein-coding chr20-4119 chr20 41875335 41875545 + 3.06 0.000 Intergenic LTR16E1|LTR|ERVL -257063 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr8-3325 chr8 32750619 32750829 + 3.06 0.000 intron (NM_001160001, intron 5 of 9) (A)n|Simple_repeat|Simple_repeat 28889 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr7-6870 chr7 51368795 51369005 + 3.06 0.000 Intergenic AluJb|SINE|Alu 24356 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr16-6021 chr16 9003958 9004168 + 3.06 0.000 Intergenic AluJb|SINE|Alu -40157 NM_003470 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chr5-6864 chr5 120657615 120657825 + 3.06 0.000 intron (NM_001308088, intron 3 of 3) intron (NM_001308088, intron 3 of 3) 126256 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr4-7075 chr4 31630110 31630320 + 3.06 0.000 Intergenic L1PA8A|LINE|L1 123671 NR_149122 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr1-16692 chr1 245180219 245180429 + 3.06 0.000 intron (NM_018012, intron 2 of 14) MIR|SINE|MIR 25339 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr22-3621 chr22 20891568 20891778 + 3.06 0.000 TTS (NM_004782) TTS (NM_004782) -25734 NR_156180 1399 Hs.5613 NM_005207 ENSG00000099942 CRKL - CRK like proto-oncogene, adaptor protein protein-coding chr5-6800 chr5 96476814 96477024 + 3.06 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -43671 NM_000439 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr5-6108 chr5 24375695 24375905 + 3.06 0.000 Intergenic L1PA7|LINE|L1 269178 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding chr3-5037 chr3 33413584 33413794 + 3.06 0.000 intron (NM_001128160, intron 3 of 14) intron (NM_001128160, intron 3 of 14) 26689 NM_001128160 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr9-7225 chr9 1131339 1131549 + 3.06 0.000 Intergenic L2|LINE|L2 79957 NR_163472 10655 Hs.59506 NM_006557 ENSG00000173253 DMRT2 - doublesex and mab-3 related transcription factor 2 protein-coding chr10-8061 chr10 65832540 65832750 + 3.06 0.000 Intergenic Intergenic 261220 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr5-5142 chr5 105843849 105844059 + 3.06 0.000 Intergenic AluSz|SINE|Alu 744480 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr10-7125 chr10 99859270 99859480 + 3.06 0.000 Intergenic Intergenic 54717 NM_001318327 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr13-3779 chr13 44536822 44537032 + 2.95 0.000 intron (NM_183422, intron 1 of 2) (A)n|Simple_repeat|Simple_repeat -38969 NR_038381 641467 Hs.624196 NR_038381 ENSG00000278156 TSC22D1-AS1 - TSC22D1 antisense RNA 1 ncRNA chr8-4929 chr8 102574880 102575090 + 2.95 0.000 Intergenic Intergenic 23396 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr8-6766 chr8 91956882 91957092 + 2.95 0.000 3' UTR (NM_175634, exon 12 of 12) 3' UTR (NM_175634, exon 12 of 12) 60693 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr1-14984 chr1 90112483 90112693 + 2.95 0.000 Intergenic L1PA6|LINE|L1 117478 NM_182976 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr19-6582 chr19 22354423 22354633 + 2.95 0.000 Intergenic Intergenic 67818 NM_001098626 148198 Hs.667355 NM_001098626 ENSG00000197360 ZNF98 F7175|ZNF739 zinc finger protein 98 protein-coding chr1-15621 chr1 162287479 162287689 + 2.95 0.000 intron (NM_001164757, intron 3 of 9) intron (NM_001164757, intron 3 of 9) -54962 NR_030283 693141 NR_030283 ENSG00000207729 MIR556 MIRN556|hsa-mir-556|mir-556 microRNA 556 ncRNA chr16-5998 chr16 7426828 7427038 + 2.95 0.000 intron (NM_145893, intron 1 of 13) L1PA5|LINE|L1 94088 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr8-7436 chr8 140676850 140677060 + 2.95 0.000 intron (NM_001352743, intron 27 of 32) AluSc8|SINE|Alu -41322 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr16-5495 chr16 11033745 11033955 + 2.95 0.000 intron (NM_015226, intron 12 of 22) intron (NM_015226, intron 12 of 22) 89286 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr1-15828 chr1 179442929 179443139 + 2.95 0.000 intron (NR_073544, intron 15 of 25) LTR3A|LTR|ERVK 76990 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr12-3526 chr12 132149731 132149941 + 2.95 0.000 intron (NM_024078, intron 9 of 14) CpG-6292 5379 NM_024078 79050 Hs.558536 NM_024078 ENSG00000184967 NOC4L NET49|NOC4|UTP19 nucleolar complex associated 4 homolog protein-coding chr4-3800 chr4 108657819 108658029 + 2.95 0.000 intron (NM_021227, intron 3 of 3) AluSq2|SINE|Alu 7325 NM_001267818 58505 Hs.445803 NM_021227 ENSG00000198856 OSTC DC2 oligosaccharyltransferase complex non-catalytic subunit protein-coding chr5-6710 chr5 66883532 66883742 + 2.95 0.000 intron (NM_015183, intron 1 of 27) AluSg|SINE|Alu 54864 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr19-7095 chr19 56638133 56638343 + 2.95 0.000 intron (NR_163262, intron 3 of 5) CpG -4921 NM_001193628 147670 Hs.336588 NM_001193628 ENSG00000268182 SMIM17 - small integral membrane protein 17 protein-coding chr11-9062 chr11 29610715 29610925 + 2.95 0.000 intron (NR_149107, intron 3 of 3) intron (NR_149107, intron 3 of 3) -7982 NR_149106 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr15-4869 chr15 75481762 75481972 + 2.95 0.000 intron (NM_002833, intron 8 of 12) SVA_F|Retroposon|SVA -26052 NM_001145357 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding chr14-4694 chr14 57531090 57531300 + 2.95 0.000 Intergenic LTR16E1|LTR|ERVL -37338 NM_001283059 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding chr5-8286 chr5 113546821 113547031 + 2.95 0.000 intron (NM_001345975, intron 9 of 28) MLT1F1|LTR|ERVL-MaLR 33232 NM_001345975 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr5-8185 chr5 105149602 105149812 + 2.95 0.000 Intergenic L1MCa|LINE|L1 50233 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr3-10743 chr3 155877705 155877915 + 2.95 0.000 intron (NM_003875, intron 1 of 15) AluSx|SINE|Alu 7160 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr2-12817 chr2 91851981 91852191 + 2.95 0.000 Intergenic SVA_F|Retroposon|SVA 76744 NR_003503 645367 Hs.650223 NR_003503 GGT8P GGT1P1 gamma-glutamyltransferase 8 pseudogene pseudo chr8-5206 chr8 113107461 113107671 + 2.95 0.000 intron (NM_001363185, intron 4 of 66) MER8|DNA|TcMar-Tigger 269586 NM_198124 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr2-13385 chr2 138280078 138280288 + 2.95 0.000 Intergenic Intergenic 178299 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr9-6146 chr9 36478314 36478524 + 2.95 0.000 Intergenic AluY|SINE|Alu -77221 NM_194330 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding chr7-6971 chr7 101693053 101693263 + 2.95 0.000 Intergenic AluSx|SINE|Alu -63862 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr2-11525 chr2 239052678 239052888 + 2.95 0.000 3' UTR (NM_006037, exon 27 of 27) 3' UTR (NM_006037, exon 27 of 27) 16131 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr1-13172 chr1 204858881 204859091 + 2.95 0.000 intron (NM_001160332, intron 1 of 27) AluSx|SINE|Alu 30332 NM_001005388 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr9-6163 chr9 75693518 75693728 + 2.95 0.000 Intergenic AluSz6|SINE|Alu -197021 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr6-7087 chr6 33995084 33995294 + 2.95 0.000 Intergenic Intergenic 4862 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr5-5563 chr5 148873378 148873588 + 2.95 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 46890 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr9-5193 chr9 72338707 72338917 + 2.95 0.000 intron (NR_110952, intron 4 of 4) intron (NR_110952, intron 4 of 4) 25744 NM_001278245 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr4-5425 chr4 12788777 12788987 + 2.95 0.000 Intergenic AluSz|SINE|Alu 565431 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr12-5927 chr12 70887889 70888099 + 2.95 0.000 intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) 32744 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr5-7629 chr5 50514636 50514846 + 2.95 0.000 Intergenic Intergenic -73453 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr1-13174 chr1 204937898 204938108 + 2.95 0.000 intron (NM_001160332, intron 2 of 27) intron (NM_001160332, intron 2 of 27) -6223 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr7-9710 chr7 155770527 155770737 + 2.95 0.000 intron (NM_053043, intron 16 of 17) intron (NM_053043, intron 16 of 17) 38440 NR_132318 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr8-6664 chr8 80165304 80165514 + 2.95 0.000 intron (NR_105035, intron 1 of 6) L1ME4b|LINE|L1 5712 NR_105037 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr2-10108 chr2 59160567 59160777 + 2.95 0.000 Intergenic L1MEb|LINE|L1 -57036 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr1-12816 chr1 86113853 86114063 + 2.95 0.000 intron (NM_152890, intron 4 of 59) intron (NM_152890, intron 4 of 59) 42513 NR_146344 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr2-7663 chr2 28917851 28918061 + 2.95 0.000 exon (NM_015131, exon 6 of 18) exon (NM_015131, exon 6 of 18) 4294 NR_003074 692209 NR_003074 ENSG00000264994 SNORD92 HBII-316 small nucleolar RNA, C/D box 92 snoRNA chr10-7274 chr10 129061468 129061678 + 2.95 0.000 Intergenic Intergenic 148740 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chrX-4600 chrX 73356500 73356710 + 2.95 0.000 Intergenic L1PA7|LINE|L1 -90649 NM_005193 1046 Hs.553488 NM_005193 ENSG00000131264 CDX4 - caudal type homeobox 4 protein-coding chr3-8118 chr3 20755406 20755616 + 2.95 0.000 Intergenic L1MA9|LINE|L1 413043 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr1-15253 chr1 113120750 113120960 + 2.95 0.000 intron (NM_014813, intron 17 of 17) AluSx3|SINE|Alu 47657 NM_001312686 9860 Hs.448972 NM_014813 ENSG00000198799 LRIG2 LIG-2|LIG2|UFS2 leucine rich repeats and immunoglobulin like domains 2 protein-coding chr5-7599 chr5 43183537 43183747 + 2.95 0.000 Intergenic AluSq2|SINE|Alu -8583 NM_153361 167359 Hs.25845 NM_153361 ENSG00000177453 NIM1K NIM1 NIM1 serine/threonine protein kinase protein-coding chr9-7896 chr9 88249471 88249681 + 2.95 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -111095 NM_001350978 645961 Hs.632070 NM_001166137 SPATA31C2 FAM75C2 SPATA31 subfamily C member 2 protein-coding chr11-7094 chr11 122532674 122532884 + 2.95 0.000 Intergenic Intergenic -109908 NR_137179 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr15-5190 chr15 93773756 93773966 + 2.95 0.000 Intergenic Intergenic -82699 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA KI270878.1-1 KI270878.1 94760 94970 + 2.95 0.000 NA NA NA NA chr11-8358 chr11 81278306 81278516 + 2.95 0.000 Intergenic MER61C|LTR|ERV1 -515608 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr3-8508 chr3 132231801 132232011 + 2.95 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -85501 NM_001099 55 Hs.433060 NM_001099 ENSG00000014257 ACPP 5'-NT|ACP-3|ACP3 acid phosphatase, prostate protein-coding chr9-5521 chr9 107257334 107257544 + 2.95 0.000 Intergenic SVA_F|Retroposon|SVA -25840 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chrX-3166 chrX 26879273 26879483 + 2.95 0.000 Intergenic Intergenic 321041 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr5-8404 chr5 126611690 126611900 + 2.95 0.000 intron (NM_032177, intron 3 of 4) AluJb|SINE|Alu 10848 NM_032177 51808 Hs.555731 NM_032177 ENSG00000164902 PHAX RNUXA phosphorylated adaptor for RNA export protein-coding chrX-4637 chrX 78354515 78354725 + 2.95 0.000 Intergenic L1MA2|LINE|L1 -26929 NM_001282186 10800 Hs.733809 NM_006639 ENSG00000173198 CYSLTR1 CYSLT1|CYSLT1R|CYSLTR|HMTMF81 cysteinyl leukotriene receptor 1 protein-coding chr4-8154 chr4 128895632 128895842 + 2.95 0.000 intron (NM_144643, intron 18 of 20) L1PA4|LINE|L1 83893 NM_001287443 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr4-6250 chr4 70486765 70486975 + 2.95 0.000 Intergenic ERVL-int|LTR|ERVL 14673 NM_152291 4589 Hs.631946 NM_152291 ENSG00000171195 MUC7 MG2 mucin 7, secreted protein-coding chr2-10930 chr2 74796014 74796224 + 2.95 0.000 Intergenic SVA_D|Retroposon|SVA -36536 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr13-3515 chr13 21971599 21971809 + 2.95 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -93544 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr13-2178 chr13 114116963 114117173 + 2.95 0.000 intron (NM_001320821, intron 1 of 25).2 intron (NM_001320821, intron 1 of 25).2 15555 NM_001320821 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr12-3127 chr12 32646046 32646256 + 2.95 0.000 TTS (NM_001304484) TTS (NM_001304484) -33049 NM_001278465 10059 Hs.556296 NM_005690 ENSG00000087470 DNM1L DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5 dynamin 1 like protein-coding chr1-16332 chr1 217915043 217915253 + 2.95 0.000 intron (NR_048550, intron 2 of 3) AluSz6|SINE|Alu 22248 NR_048550 100885798 Hs.434632 NR_048550 ENSG00000231814 LINC00210 NCRNA00210 long intergenic non-protein coding RNA 210 ncRNA chr1-12595 chr1 34478619 34478829 + 2.95 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 190970 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr9-5689 chr9 124205486 124205696 + 2.95 0.000 Intergenic ERVL-E-int|LTR|ERVL -52015 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr10-7177 chr10 104794600 104794810 + 2.95 0.000 intron (NM_014978, intron 1 of 26) intron (NM_014978, intron 1 of 26) -128489 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr17-7083 chr17 67162617 67162827 + 2.95 0.000 intron (NM_001330447, intron 15 of 32) intron (NM_001330447, intron 15 of 32) -82054 NR_136398 101928021 Hs.569824 NR_136398 LOC101928021 - uncharacterized LOC101928021 ncRNA chr18-3382 chr18 59386658 59386868 + 2.95 0.000 Intergenic Intergenic -27498 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr13-3379 chr13 81455655 81455865 + 2.83 0.000 Intergenic Intergenic -228777 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chrX-4731 chrX 91331471 91331681 + 2.83 0.000 Intergenic L1PB1|LINE|L1 -103263 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr3-8752 chr3 2026139 2026349 + 2.83 0.000 Intergenic Intergenic -72559 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr1-15493 chr1 155791741 155791951 + 2.83 0.000 intron (NM_032292, intron 12 of 20) AluSq2|SINE|Alu -8014 NR_132767 106633816 NR_132767 SCARNA26B - small Cajal body-specific RNA 26B ncRNA chr14-4774 chr14 64211972 64212182 + 2.83 0.000 exon (NM_182914, exon 104 of 116) exon (NM_182914, exon 104 of 116) -2067 NM_182913 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr17-5365 chr17 30980083 30980293 + 2.83 0.000 intron (NM_197939, intron 1 of 3) SVA_E|Retroposon|SVA 4853 NR_002221 503645 Hs.683578 NR_002221 ENSG00000264743 DPRXP4 - divergent-paired related homeobox pseudogene 4 pseudo chr12-5637 chr12 66285916 66286126 + 2.83 0.000 Intergenic AluSc8|SINE|Alu -16472 NM_001370285 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr20-2931 chr20 1285999 1286209 + 2.83 0.000 intron (NM_014723, intron 2 of 5) AluSg4|SINE|Alu 19810 NM_014723 9751 Hs.323833 NM_014723 ENSG00000101298 SNPH - syntaphilin protein-coding chr10-6557 chr10 73487471 73487681 + 2.83 0.000 intron (NM_001289969, intron 1 of 12) AluSx1|SINE|Alu -8176 NR_132103 101929145 Hs.434502 NR_132103 ENSG00000221817 PPP3CB-AS1 USP54-AS1 PPP3CB antisense RNA 1 (head to head) ncRNA chr5-6103 chr5 18209653 18209863 + 2.83 0.000 Intergenic AluSz6|SINE|Alu 402484 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chrX-2973 chrX 24709232 24709442 + 2.83 0.000 intron (NM_016937, intron 4 of 36) SVA_F|Retroposon|SVA 15419 NM_001330360 5422 Hs.567319 NM_016937 ENSG00000101868 POLA1 NSX|POLA|p180 DNA polymerase alpha 1, catalytic subunit protein-coding chr9-7573 chr9 35801573 35801783 + 2.83 0.000 exon (NM_003995, exon 8 of 22) exon (NM_003995, exon 8 of 22) 9269 NM_003995 4882 Hs.78518 NM_000907 ENSG00000159899 NPR2 AMDM|ANPRB|ANPb|ECDM|GUC2B|GUCY2B|NPRB|NPRBi|SNSK natriuretic peptide receptor 2 protein-coding chrX-5337 chrX 147602730 147602940 + 2.83 0.000 Intergenic Intergenic 308982 NR_024499 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr4-5866 chr4 122357484 122357694 + 2.83 0.000 intron (NM_015312, intron 82 of 83) intron (NM_015312, intron 82 of 83) -21422 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding chrX-3386 chrX 155008979 155009189 + 2.83 0.000 intron (NM_000132, intron 1 of 25) AluYb8|SINE|Alu 13639 NM_000132 2157 Hs.632836 NM_000132 ENSG00000185010 F8 AHF|DXS1253E|F8B|F8C|FVIII|HEMA coagulation factor VIII protein-coding chr5-5466 chr5 139174840 139175050 + 2.83 0.000 intron (NM_022464, intron 1 of 9) AluSx|SINE|Alu 23423 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr17-6617 chr17 62032516 62032726 + 2.83 0.000 intron (NM_005121, intron 5 of 29) intron (NM_005121, intron 5 of 29) 32657 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr3-10165 chr3 116624241 116624451 + 2.83 0.000 Intergenic L1MA3|LINE|L1 71873 NR_046624 100861506 Hs.641878 NR_046624 LINC00903 LSAMP-AS2 long intergenic non-protein coding RNA 903 ncRNA chr18-3048 chr18 28425526 28425736 + 2.83 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -248501 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr5-8456 chr5 130766733 130766943 + 2.83 0.000 Intergenic LTR103_Mam|LTR|ERV1? 398418 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr6-6198 chr6 13726196 13726406 + 2.83 0.000 Intergenic Intergenic -14466 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr9-3580 chr9 75518641 75518851 + 2.83 0.000 Intergenic MER6A|DNA|TcMar-Tigger -371898 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr7-8724 chr7 75927864 75928074 + 2.83 0.000 intron (NM_001367562, intron 2 of 16) AluSg|SINE|Alu 12772 NR_039795 100616270 NR_039795 ENSG00000284334 MIR4651 mir-4651 microRNA 4651 ncRNA chr1-14104 chr1 30867032 30867242 + 2.83 0.000 Intergenic MIR|SINE|MIR 41621 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr4-8485 chr4 159429138 159429348 + 2.83 0.000 Intergenic Intergenic 161434 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding ML143377.1-6 ML143377.1 463811 464021 + 2.83 0.000 NA NA NA NA chr1-14562 chr1 52966666 52966876 + 2.83 0.000 intron (NM_001193600, intron 5 of 14) AluSx3|SINE|Alu 39495 NM_001193600 6342 Hs.476365 NM_002979 ENSG00000116171 SCP2 NLTP|NSL-TP|SCP-2|SCP-CHI|SCP-X|SCPX sterol carrier protein 2 protein-coding chr8-5094 chr8 49565028 49565238 + 2.83 0.000 Intergenic AluSz|SINE|Alu -52953 NR_134294 100507464 Hs.245745 NR_134294 ENSG00000253380 LOC100507464 - uncharacterized LOC100507464 ncRNA chr3-8296 chr3 58933523 58933733 + 2.83 0.000 intron (NR_147235, intron 6 of 6) L1PA3|LINE|L1 109157 NR_110820 101929238 Hs.683953 NR_110820 ENSG00000242428 C3orf67-AS1 - C3orf67 antisense RNA 1 ncRNA chr6-6690 chr6 169021019 169021229 + 2.83 0.000 Intergenic Intergenic 14519 NR_134622 101929460 Hs.355225 NR_134622 ENSG00000229720 LOC101929460 - uncharacterized LOC101929460 ncRNA KI270908.1-1 KI270908.1 651216 651426 + 2.83 0.000 NA NA NA NA chr10-6472 chr10 36934593 36934803 + 2.83 0.000 Intergenic L2b|LINE|L2 -191159 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr22-2947 chr22 48408707 48408917 + 2.83 0.000 Intergenic AluSz|SINE|Alu -80741 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr2-13831 chr2 176281181 176281391 + 2.83 0.000 intron (NM_001006635, intron 2 of 10) MLT1G|LTR|ERVL-MaLR 11844 NM_001006635 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr2-10991 chr2 99783553 99783763 + 2.83 0.000 intron (NM_001025108, intron 7 of 23) intron (NM_001025108, intron 7 of 23) -293641 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr18-1643 chr18 57000934 57001144 + 2.83 0.000 intron (NM_015285, intron 26 of 27) AluJo|SINE|Alu 71080 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr12-5812 chr12 24952564 24952774 + 2.83 0.000 Intergenic Intergenic -3568 NM_001178092 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr12-8065 chr12 116511743 116511953 + 2.83 0.000 Intergenic Intergenic -21574 NR_027345 100287569 Hs.441601 NM_207436 ENSG00000196668 LINC00173 NCRNA00173 long intergenic non-protein coding RNA 173 ncRNA chr12-5356 chr12 117724214 117724424 + 2.83 0.000 intron (NM_173598, intron 4 of 19) AluSz|SINE|Alu 244671 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr12-7846 chr12 103601236 103601446 + 2.83 0.000 intron (NM_017564, intron 3 of 68) AluSx1|SINE|Alu 14068 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chrX-2294 chrX 53029305 53029515 + 2.83 0.000 Intergenic Intergenic -19914 NM_018969 54328 Hs.193011 NM_018969 ENSG00000184194 GPR173 SREB3 G protein-coupled receptor 173 protein-coding chr1-13329 chr1 242982740 242982950 + 2.83 0.000 Intergenic AluSx1|SINE|Alu 118899 NR_029401 731275 Hs.722350 NR_029401 ENSG00000214837 LINC01347 - long intergenic non-protein coding RNA 1347 ncRNA chr3-8643 chr3 174463501 174463711 + 2.83 0.000 Intergenic AluY|SINE|Alu -395728 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr2-6690 chr2 20795894 20796104 + 2.83 0.000 intron (NR_104233, intron 1 of 4) intron (NR_104233, intron 1 of 4) 27102 NM_021925 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding KQ983257.1-1 KQ983257.1 207021 207231 + 2.83 0.000 NA NA NA NA chr3-9314 chr3 44014543 44014753 + 2.83 0.000 Intergenic Intergenic -99564 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr20-3308 chr20 12863379 12863589 + 2.83 0.000 Intergenic Intergenic 73479 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chrX-3211 chrX 51119254 51119464 + 2.83 0.000 intron (NR_110382, intron 1 of 8) SVA_B|Retroposon|SVA 52062 NR_110382 101926971 Hs.657995 NR_110382 ENSG00000230317 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA chr6-6561 chr6 135644348 135644558 + 2.83 0.000 intron (NR_152842, intron 3 of 5) AluSx4|SINE|Alu 146652 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr5-9136 chr5 175772785 175772995 + 2.83 0.000 Intergenic Intergenic -23643 NM_006650 10814 Hs.193235 NM_006650 ENSG00000145920 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding chr20-4433 chr20 61331489 61331699 + 2.83 0.000 intron (NM_001794, intron 2 of 15) intron (NM_001794, intron 2 of 15) 79333 NM_001794 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr1-12210 chr1 204538773 204538983 + 2.83 0.000 intron (NM_001278517, intron 4 of 7) AluSp|SINE|Alu 22472 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr3-9775 chr3 70946142 70946352 + 2.83 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 118677 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr20-3609 chr20 5610022 5610232 + 2.83 0.000 intron (NM_019593, intron 1 of 19) intron (NM_019593, intron 1 of 19) 879 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr5-5790 chr5 174869045 174869255 + 2.83 0.000 Intergenic AluSx|SINE|Alu 117416 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr2-9612 chr2 241927896 241928106 + 2.83 0.000 intron (NR_110220, intron 2 of 3) intron (NR_110220, intron 2 of 3) -25378 NR_135766 285095 Hs.85890 NR_135766 ENSG00000216921 LOC285095 - uncharacterized LOC285095 ncRNA chr8-5289 chr8 141681297 141681507 + 2.83 0.000 Intergenic Intergenic 104911 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr20-3003 chr20 46675198 46675408 + 2.83 0.000 intron (NM_001193340, intron 1 of 12) AluSx|SINE|Alu 9182 NM_001011554 64849 Hs.655498 NM_022829 ENSG00000158296 SLC13A3 ARLIAK|NADC3|SDCT2 solute carrier family 13 member 3 protein-coding chr12-3726 chr12 16832531 16832741 + 2.83 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -156111 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo chr22-4284 chr22 49647275 49647485 + 2.83 0.000 intron (NM_001289922, intron 1 of 5) (GGAGCTG)n|Simple_repeat|Simple_repeat 10139 NR_110522 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr9-6776 chr9 27246836 27247046 + 2.83 0.000 intron (NR_026679, intron 16 of 16) intron (NR_026679, intron 16 of 16) 35852 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA chr18-1965 chr18 37705315 37705525 + 2.83 0.000 Intergenic Intergenic 48285 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr16-4432 chr16 52994877 52995087 + 2.83 0.000 Intergenic AluSz|SINE|Alu 57891 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr1-15137 chr1 103202189 103202399 + 2.83 0.000 Intergenic Intergenic -93772 NM_080630 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr4-8203 chr4 134631771 134631981 + 2.83 0.000 Intergenic Intergenic 208008 NR_147155 105377434 Hs.738318 NR_147155 LINC02462 - long intergenic non-protein coding RNA 2462 ncRNA chr6-8057 chr6 121537936 121538146 + 2.83 0.000 Intergenic Intergenic 102395 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr2-13324 chr2 132222036 132222246 + 2.83 0.000 intron (NR_152415, intron 1 of 5) SVA_E|Retroposon|SVA 34939 NR_031608 100313824 NR_031608 ENSG00000221288 MIR663B MIRN663B|mir-663b microRNA 663b ncRNA chr9-8405 chr9 119969095 119969305 + 2.83 0.000 Intergenic Intergenic 34140 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chrX-2008 chrX 14822990 14823200 + 2.83 0.000 Intergenic AluSq4|SINE|Alu 49974 NM_001324162 2187 Hs.554740 NM_152633 ENSG00000181544 FANCB FA2|FAAP90|FAAP95|FAB|FACB FA complementation group B protein-coding chr8-4025 chr8 59158136 59158346 + 2.71 0.000 Intergenic Intergenic 39031 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr1-8575 chr1 172758445 172758655 + 2.71 0.000 Intergenic (TTTT)n|Simple_repeat|Simple_repeat 99447 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr7-8112 chr7 26412531 26412741 + 2.71 0.000 intron (NR_148500, intron 2 of 5) intron (NR_148500, intron 2 of 5) -13218 NR_136272 105375304 Hs.735352 NR_136270 ENSG00000225792 LOC105375304 - uncharacterized LOC105375304 ncRNA chrY-33 chrY 10967477 10967687 + 2.71 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat 1056784 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 ncRNA chr3-8454 chr3 122164633 122164843 + 2.71 0.000 Intergenic SVA_F|Retroposon|SVA -18930 NM_000388 846 Hs.435615 NM_000388 ENSG00000036828 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1|hCasR calcium sensing receptor protein-coding chr13-3253 chr13 34413841 34414051 + 2.71 0.000 intron (NR_146542, intron 1 of 3) MIRb|SINE|MIR 65903 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr9-7773 chr9 77761397 77761607 + 2.71 0.000 intron (NM_002072, intron 5 of 6) SVA_D|Retroposon|SVA -113180 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr4-5545 chr4 125356448 125356658 + 2.71 0.000 intron (NM_001291303, intron 1 of 16) (T)n|Simple_repeat|Simple_repeat 40141 NM_001291303 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr8-6154 chr8 31359876 31360086 + 2.71 0.000 Intergenic LTR51|LTR|ERV1 -279771 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr4-7127 chr4 36408888 36409098 + 2.71 0.000 Intergenic AluY|SINE|Alu 17435 NR_031701 100313806 NR_031701 ENSG00000283207 MIR1255B1 MIR1255B-1|MIRN1255B1 microRNA 1255b-1 ncRNA chr11-7947 chr11 3894729 3894939 + 2.71 0.000 intron (NM_001277962, intron 1 of 12) AluSx|SINE|Alu 38772 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr10-8055 chr10 65332909 65333119 + 2.71 0.000 Intergenic Intergenic -238411 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr12-5662 chr12 85700939 85701149 + 2.71 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 135365 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr11-7219 chr11 1097013 1097223 + 2.71 0.000 exon (NM_002457, exon 32 of 61) exon (NM_002457, exon 32 of 61) 22243 NM_002457 4583 Hs.315 NM_002457 MUC2 MLP|MUC-2|SMUC mucin 2, oligomeric mucus/gel-forming protein-coding chr2-14176 chr2 205625385 205625595 + 2.71 0.000 Intergenic LTR67B|LTR|ERVL -57010 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr3-8821 chr3 8106372 8106582 + 2.71 0.000 Intergenic AluSx|SINE|Alu -90170 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr21-1258 chr21 8403041 8403251 + 2.71 0.000 TTS (NR_146151) TTS (NR_146151) 6220 NR_146154 109910382 NR_146154 RNA28SN3 - RNA, 28S ribosomal N3 rRNA chr11-7548 chr11 17246210 17246420 + 2.71 0.000 Intergenic Intergenic -30399 NM_001352666 4925 Hs.654599 NM_005013 ENSG00000070081 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding chr14-4953 chr14 74483410 74483620 + 2.71 0.000 intron (NM_001363688, intron 3 of 3) intron (NM_001363688, intron 3 of 3) -3311 NR_039858 100616211 NR_039858 ENSG00000283944 MIR4709 mir-4709 microRNA 4709 ncRNA chr1-12739 chr1 61616579 61616789 + 2.71 0.000 Intergenic L2c|LINE|L2 -37558 NR_073400 414927 Hs.123471 NR_073400 MGC34796 - sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene pseudo chrX-3372 chrX 148971042 148971252 + 2.71 0.000 intron (NM_001170628, intron 12 of 17) intron (NM_001170628, intron 12 of 17) 252056 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr12-6236 chr12 32265590 32265800 + 2.71 0.000 intron (NR_148725, intron 2 of 9) AluJr4|SINE|Alu -133863 NM_001370298 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr10-7729 chr10 31520822 31521032 + 2.71 0.000 exon (NM_001174095, exon 6 of 8) exon (NM_001174095, exon 6 of 8) -121172 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr10-8003 chr10 61157817 61158027 + 2.71 0.000 Intergenic Intergenic 141647 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr1-11946 chr1 66029953 66030163 + 2.59 0.000 intron (NM_001037340, intron 1 of 14) L1P4|LINE|L1 20660 NR_123718 101927139 Hs.127908 NR_123718 ENSG00000227466 LOC101927139 - uncharacterized LOC101927139 ncRNA chrX-3133 chrX 13558161 13558371 + 2.59 0.000 Intergenic AluJb|SINE|Alu -11335 NM_015507 25975 Hs.12844 NM_015507 ENSG00000198759 EGFL6 MAEG|W80 EGF like domain multiple 6 protein-coding chr12-5986 chr12 95345220 95345430 + 2.59 0.000 Intergenic AluSz|SINE|Alu 35402 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr9-6923 chr9 93925801 93926011 + 2.59 0.000 Intergenic Intergenic 29449 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr7-7938 chr7 9943255 9943465 + 2.59 0.000 Intergenic Tigger12|DNA|TcMar-Tigger 309090 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo chr6-8472 chr6 156000204 156000414 + 2.59 0.000 Intergenic L1MA9|LINE|L1 53512 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr6-8068 chr6 122930612 122930822 + 2.59 0.000 Intergenic L1PA11|LINE|L1 -65518 NM_001010852 134829 Hs.486361 NM_001010852 ENSG00000146352 CLVS2 C6orf212|C6orf213|RLBP1L2|bA160A10.4 clavesin 2 protein-coding chr17-7128 chr17 76328975 76329185 + 2.59 0.000 intron (NM_001366236, intron 6 of 9) AluJo|SINE|Alu -21400 NM_032134 84074 Hs.252739 NM_032134 ENSG00000129646 QRICH2 SPGF35 glutamine rich 2 protein-coding chr3-9066 chr3 26026437 26026647 + 2.59 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -152847 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr8-5334 chr8 6052140 6052350 + 2.59 0.000 Intergenic Intergenic 354303 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr9-8536 chr9 126365228 126365438 + 2.59 0.000 intron (NM_033446, intron 2 of 9) AluSx1|SINE|Alu 38504 NM_001011703 89853 Hs.162659 NM_033446 ENSG00000196814 MVB12B C9orf28|FAM125B multivesicular body subunit 12B protein-coding chr10-6289 chr10 98394517 98394727 + 2.59 0.000 TTS (NR_031619) TTS (NR_031619) 685 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr5-7947 chr5 80098130 80098340 + 2.59 0.000 Intergenic AluJr|SINE|Alu -14570 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr5-7015 chr5 156943979 156944189 + 2.59 0.000 intron (NM_001146726, intron 4 of 7) AluSx3|SINE|Alu 19142 NM_001146726 91937 Hs.334907 NM_138379 ENSG00000145850 TIMD4 SMUCKLER|TIM4 T cell immunoglobulin and mucin domain containing 4 protein-coding chr5-8301 chr5 114916455 114916665 + 2.59 0.000 Intergenic L1PA3|LINE|L1 -143147 NR_130785 101927078 Hs.160027 NR_130785 LOC101927078 - uncharacterized LOC101927078 ncRNA chr12-6122 chr12 130120556 130120766 + 2.59 0.000 Intergenic Intergenic 41017 NR_033834 440119 Hs.288262 NR_033834 ENSG00000250208 FZD10-AS1 FZD10-DT FZD10 antisense divergent transcript ncRNA chr7-8753 chr7 77659249 77659459 + 2.59 0.000 intron (NR_134254, intron 1 of 1) intron (NR_134254, intron 1 of 1) 36911 NR_134251 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr6-5292 chr6 141074667 141074877 + 2.59 0.000 Intergenic L1PA15-16|LINE|L1 390958 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr4-8400 chr4 151870971 151871181 + 2.59 0.000 Intergenic Intergenic -110053 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr22-3341 chr22 22995375 22995585 + 2.59 0.000 Intergenic L1M4a1|LINE|L1 -75039 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr5-6164 chr5 51753389 51753599 + 2.59 0.000 Intergenic L1MA10|LINE|L1 -254537 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr10-7948 chr10 53991737 53991947 + 2.59 0.000 intron (NM_001354411, intron 22 of 34) LTR12C|LTR|ERV1 -494388 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA chr12-6129 chr12 133192020 133192230 + 2.59 0.000 intron (NM_001165885, intron 4 of 4) AluSx|SINE|Alu 10630 NM_001165883 10795 Hs.124047 NM_003415 ENSG00000090612 ZNF268 HZF3 zinc finger protein 268 protein-coding chr2-12099 chr2 33750483 33750693 + 2.59 0.000 intron (NR_126403, intron 1 of 5) intron (NR_126403, intron 1 of 5) -22371 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr17-7339 chr17 6113938 6114148 + 2.59 0.000 intron (NM_015253, intron 7 of 8) L1MA5|LINE|L1 43429 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr12-7033 chr12 38776929 38777139 + 2.59 0.000 intron (NM_153634, intron 6 of 19) Tigger3b|DNA|TcMar-Tigger 128557 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr1-16670 chr1 242703340 242703550 + 2.59 0.000 Intergenic Intergenic -178748 NM_001320272 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr1-14765 chr1 68256233 68256443 + 2.59 0.000 Intergenic Intergenic -23792 NM_001193334 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chr7-8655 chr7 71383205 71383415 + 2.59 0.000 intron (NM_022479, intron 2 of 10) MER2|DNA|TcMar-Tigger -75540 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr2-12316 chr2 47494772 47494982 + 2.59 0.000 Intergenic Intergenic -32660 NR_120602 644093 Hs.734158 NR_120602 ENSG00000235760 HCG2040054 - uncharacterized LOC644093 ncRNA chr10-6321 chr10 114789593 114789803 + 2.59 0.000 Intergenic L1PREC2|LINE|L1 -21394 NM_001322885 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr7-8091 chr7 25343425 25343635 + 2.59 0.000 Intergenic Intergenic -115044 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr4-6122 chr4 21140766 21140976 + 2.59 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) -156862 NM_001363504 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr7-7053 chr7 145155566 145155776 + 2.59 0.000 Intergenic AluSx1|SINE|Alu -319618 NM_001350883 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr3-9900 chr3 84151495 84151705 + 2.59 0.000 Intergenic L1MA9|LINE|L1 717975 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr11-8698 chr11 5661835 5662045 + 2.59 0.000 Intergenic Intergenic 23134 NM_033034 85363 Hs.125300 NM_033034 ENSG00000132256 TRIM5 RNF88|TRIM5alpha tripartite motif containing 5 protein-coding chrX-2994 chrX 44565003 44565213 + 2.59 0.000 Intergenic AluSz|SINE|Alu -22249 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr12-5742 chr12 127804990 127805200 + 2.59 0.000 Intergenic AluSx1|SINE|Alu -76522 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chr13-3359 chr13 76671222 76671432 + 2.47 0.000 Intergenic AluJr4|SINE|Alu 215078 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr7-8357 chr7 44003909 44004119 + 2.47 0.000 intron (NM_175064, intron 3 of 6) intron (NM_175064, intron 3 of 6) 3124 NM_175064 285955 Hs.645483 NM_175064 ENSG00000136206 SPDYE1 Ringo1|SPDYB2L2|SPDYE|WBSCR19 speedy/RINGO cell cycle regulator family member E1 protein-coding chrY-30 chrY 368351 368561 + 2.47 0.000 intron (NM_013239, intron 1 of 12).2 intron (NM_013239, intron 1 of 12).2 18451 NM_013239 28227 Hs.124942 NM_013239 ENSG00000167393 PPP2R3B NYREN8|PPP2R3L|PPP2R3LY|PR48|PR70 protein phosphatase 2 regulatory subunit B''beta protein-coding chr4-7001 chr4 23515281 23515491 + 2.47 0.000 Intergenic L1MA2|LINE|L1 365906 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr15-5193 chr15 93941111 93941321 + 2.47 0.000 intron (NR_120320, intron 8 of 8) intron (NR_120320, intron 8 of 8) 40515 NR_120323 101927129 Hs.652658 NR_120322 ENSG00000258785 LINC01580 - long intergenic non-protein coding RNA 1580 ncRNA chrX-4824 chrX 102031911 102032121 + 2.47 0.000 Intergenic L1PA4|LINE|L1 -93663 NM_080390 140597 Hs.401835 NM_080390 ENSG00000184905 TCEAL2 MY0876G05|WEX1|my048 transcription elongation factor A like 2 protein-coding chr10-5885 chr10 117139664 117139874 + 2.47 0.000 Intergenic CpG -1499 NM_199131 11023 Hs.441536 NM_199131 ENSG00000148704 VAX1 MCOPS11 ventral anterior homeobox 1 protein-coding chr2-13992 chr2 190559158 190559368 + 2.47 0.000 Intergenic L2|LINE|L2 -24541 NM_001142645 100131211 Hs.659824 NM_001142645 ENSG00000189362 NEMP2 TMEM194B nuclear envelope integral membrane protein 2 protein-coding KI270913.1-1 KI270913.1 40853 41063 + 2.47 0.000 NA NA NA NA chr18-2753 chr18 80263083 80263281 + 2.47 0.000 Intergenic (GTTAGG)n|Simple_repeat|Simple_repeat -15668 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chrX-3308 chrX 115888620 115888830 + 2.47 0.000 intron (NR_147172, intron 2 of 2) CpG 47761 NR_147173 106029310 Hs.571742 NR_147172 DANT1 - DXZ4 associated non-coding transcript 1, proximal ncRNA chr11-10055 chr11 84161031 84161241 + 2.47 0.000 intron (NM_001142699, intron 9 of 27) L2a|LINE|L2 112144 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr3-8421 chr3 109158293 109158503 + 2.47 0.000 Intergenic AluSz6|SINE|Alu -19767 NR_026767 677779 Hs.618669 NM_001040054 ENSG00000214381 LINC00488 C3orf66 long intergenic non-protein coding RNA 488 ncRNA chr8-5837 chr8 5690674 5690884 + 2.47 0.000 Intergenic L1PA10|LINE|L1 -695865 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding ML143377.1-7 ML143377.1 508366 508576 + 2.47 0.000 NA NA NA NA chr5-9206 chr5 180539053 180539263 + 2.47 0.000 intron (NR_163438, intron 2 of 10) AluSc|SINE|Alu -2496 NM_001370474 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding chr1-14191 chr1 33903279 33903489 + 2.36 0.000 intron (NM_052896, intron 5 of 69) intron (NM_052896, intron 5 of 69) 34428 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr10-9257 chr10 133567996 133568206 + 2.36 0.000 non-coding (NR_033789, exon 2 of 2) non-coding (NR_033789, exon 2 of 2) 174 NM_130784 93426 Hs.553795 NM_130784 ENSG00000171772 SYCE1 C10orf94|CT76|POF12|SPGF15 synaptonemal complex central element protein 1 protein-coding chrX-4514 chrX 66089437 66089647 + 2.36 0.000 Intergenic L1PBa|LINE|L1 -49417 NM_001184830 11326 Hs.8904 NM_007268 ENSG00000155659 VSIG4 CRIg|Z39IG V-set and immunoglobulin domain containing 4 protein-coding chr4-7587 chr4 80629903 80630113 + 2.36 0.000 intron (NM_001206997, intron 4 of 6) L1MEi|LINE|L1 294288 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr2-7455 chr2 13853024 13853234 + 2.36 0.000 Intergenic THE1B|LTR|ERVL-MaLR 547829 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr10-8787 chr10 106249009 106249219 + 2.36 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 108949 NR_134329 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr13-3133 chr13 80678724 80678934 + 2.36 0.000 Intergenic L1MA1|LINE|L1 -337703 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr9-8621 chr9 128875151 128875361 + 2.36 0.000 intron (NM_001352997, intron 1 of 13) AluYh7|SINE|Alu 6694 NM_004059 883 Hs.495250 NM_004059 ENSG00000171097 KYAT1 CCBL1|GTK|KAT1|KATI kynurenine aminotransferase 1 protein-coding chr12-5797 chr12 16191567 16191777 + 2.36 0.000 intron (NM_001170798, intron 8 of 8) intron (NM_001170798, intron 8 of 8) 86013 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding chr18-3413 chr18 62968432 62968642 + 2.36 0.000 intron (NM_194449, intron 14 of 16) AluSx3|SINE|Alu 252996 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr8-5341 chr8 13905581 13905791 + 2.36 0.000 Intergenic Intergenic 275996 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chrX-3470 chrX 31456228 31456438 + 2.36 0.000 intron (NM_000109, intron 59 of 78) intron (NM_000109, intron 59 of 78) 51965 NM_004014 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr7-7563 chr7 119073959 119074169 + 2.36 0.000 Intergenic Intergenic 833311 NR_131963 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr18-3065 chr18 31634191 31634401 + 2.36 0.000 intron (NM_001330570, intron 4 of 7) intron (NM_001330570, intron 4 of 7) 42529 NM_000371 7276 Hs.427202 NM_000371 ENSG00000118271 TTR ATTR|CTS|CTS1|HEL111|HsT2651|PALB|TBPA transthyretin protein-coding chr5-8156 chr5 102402846 102403056 + 2.36 0.000 intron (NM_173488, intron 9 of 13) MER46C|DNA|TcMar-Tigger 96050 NM_173488 133482 Hs.388874 NM_173488 ENSG00000205359 SLCO6A1 CT48|GST|OATP-I|OATP6A1|OATPY solute carrier organic anion transporter family member 6A1 protein-coding chr10-7589 chr10 19227972 19228182 + 2.24 0.000 intron (NM_001142308, intron 18 of 39) L1ME1|LINE|L1 179276 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chrX-4643 chrX 79075041 79075251 + 2.24 0.000 Intergenic L1PA8|LINE|L1 -95826 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr21-1308 chr21 45236348 45236558 + 2.24 0.000 intron (NR_135279, intron 1 of 2) intron (NR_135279, intron 1 of 2) 2113 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr7-8920 chr7 95082340 95082550 + 2.24 0.000 intron (NM_017650, intron 2 of 15) L1M4|LINE|L1 172547 NM_001166162 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr4-3205 chr4 27258417 27258627 + 2.24 0.000 intron (NR_125921, intron 3 of 5) intron (NR_125921, intron 3 of 5) 41043 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr2-9847 chr2 171489586 171489796 + 2.24 0.000 Intergenic AluY|SINE|Alu -32542 NM_001256909 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr8-6657 chr8 79747488 79747698 + 2.12 0.000 Intergenic Intergenic 18882 NM_001282851 23462 Hs.234434 NM_012258 ENSG00000164683 HEY1 BHLHb31|CHF2|HERP2|HESR1|HRT-1|NERP2|OAF1|hHRT1 hes related family bHLH transcription factor with YRPW motif 1 protein-coding chr1-15218 chr1 110825930 110826140 + 2.12 0.000 Intergenic L1MA7|LINE|L1 -45164 NM_001040033 963 Hs.443057 NM_000560 ENSG00000143119 CD53 MOX44|TSPAN25 CD53 molecule protein-coding chr7-4224 chr7 258029 258239 + 2.12 0.000 intron (NM_020223, intron 8 of 9) intron (NM_020223, intron 8 of 9) 65563 NM_020223 56975 Hs.134742 NM_020223 ENSG00000177706 FAM20C DMP-4|DMP4|G-CK|GEF-CK|RNS FAM20C golgi associated secretory pathway kinase protein-coding chr11-8603 chr11 1551402 1551612 + 2.12 0.000 Intergenic Intergenic 20764 NM_004420 1850 Hs.41688 NM_004420 ENSG00000184545 DUSP8 C11orf81|HB5|HVH-5|HVH8 dual specificity phosphatase 8 protein-coding chr4-6344 chr4 95743318 95743528 + 2.00 0.000 Intergenic THE1B|LTR|ERVL-MaLR -96670 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding KI270776.1-2 KI270776.1 140066 140276 + 2.00 0.000 NA NA NA NA chr22-3542 chr22 16352707 16352917 + 2.00 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat 239998 NM_014406 150160 Hs.128342 NM_014406 ENSG00000198445 CCT8L2 CESK1 chaperonin containing TCP1 subunit 8 like 2 protein-coding